264 311 42 18 chr5 0 167 -203085365 + CT-rich Low_complexity Low_complexity 2 172 0 562 234 223 16 chr5 506 690 -203084842 - MER58A DNA MER1_type -2 222 1 26 30 0 0 chr5 1852 1885 -203083647 + AT_rich Low_complexity Low_complexity 1 33 0 556 233 58 28 chr5 2334 2574 -203082958 + L1M4 LINE L1 2958 3215 -2931 22 0 0 0 chr5 2720 2742 -203082790 + AT_rich Low_complexity Low_complexity 1 22 0 1602 163 12 4 chr5 2747 3004 -203082528 - AluJb SINE Alu -36 276 18 1506 120 48 0 chr5 3023 3273 -203082259 - AluSg SINE Alu -18 292 31 8725 48 1 7 chr5 3413 4507 -203081025 - L1P LINE L1 -1638 4508 3422 210 213 62 0 chr5 4793 4873 -203080659 + (TA)n Simple_repeat Simple_repeat 1 85 0 299 262 0 65 chr5 5141 5248 -203080284 + MIR SINE MIR 163 262 0 431 195 142 12 chr5 5420 5589 -203079943 - LTR54B LTR ERV1 0 498 308 646 189 49 0 chr5 5735 5857 -203079675 + MER41A LTR ERV1 426 553 -1 308 283 170 39 chr5 5859 6142 -203079390 + L2 LINE L2 2921 3240 -73 23 68 0 0 chr5 6955 6999 -203078533 + AT_rich Low_complexity Low_complexity 1 44 0 183 42 0 0 chr5 7669 7693 -203077839 + (T)n Simple_repeat Simple_repeat 1 24 0 2514 57 7 0 chr5 8144 8441 -203077091 + AluY SINE Alu 3 301 -10 1928 120 31 7 chr5 10114 10405 -203075127 + AluSx SINE Alu 1 298 -14 2364 91 0 7 chr5 10407 10704 -203074828 + AluSg SINE Alu 1 295 -15 2343 91 0 3 chr5 11588 11895 -203073637 - AluSx SINE Alu -6 306 1 1006 96 58 13 chr5 12189 12345 -203073187 - MER30 DNA MER1_type 0 230 68 1315 184 109 0 chr5 12734 13027 -203072505 + Charlie1 DNA MER1_type 2437 2761 0 435 193 167 0 chr5 13191 13305 -203072227 - L1MB5 LINE L1 -1 6173 6041 7263 110 11 17 chr5 13650 14859 -203070673 - L1P LINE L1 -3710 2436 1236 197 215 0 25 chr5 15218 15297 -203070235 + (CATA)n Simple_repeat Simple_repeat 4 80 0 338 0 0 23 chr5 15406 15449 -203070083 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2435 75 13 0 chr5 15452 15758 -203069774 - AluY SINE Alu -1 310 1 595 126 0 0 chr5 16189 16276 -203069256 + AluSg/x SINE Alu 198 284 -28 195 69 0 0 chr5 16276 16305 -203069227 + (TA)n Simple_repeat Simple_repeat 2 30 0 239 261 78 17 chr5 16338 16453 -203069079 - L1ME4a LINE L1 -49 6072 5951 2194 105 0 29 chr5 16473 16786 -203068746 - AluSx SINE Alu -8 304 1 1576 74 35 30 chr5 16829 17007 -203068525 + L1MA1 LINE L1 6068 6249 -53 2443 88 3 0 chr5 17007 17314 -203068218 + AluY SINE Alu 1 308 -3 1576 74 35 30 chr5 17314 17365 -203068167 + L1MA1 LINE L1 6249 6298 -4 2137 108 20 7 chr5 17434 17740 -203067792 - AluSg SINE Alu 0 310 1 420 350 37 28 chr5 18619 18836 -203066696 + MIR SINE MIR 26 244 -18 1709 126 0 8 chr5 19192 19439 -203066093 - AluSp SINE Alu -68 245 1 935 167 29 23 chr5 19439 19613 -203065919 - FRAM SINE Alu -1 175 1 601 222 61 11 chr5 20299 20479 -203065053 - AluSg1 SINE Alu -120 189 1 647 179 32 32 chr5 20483 20639 -203064893 - L1MC5 LINE L1 -35 7926 7771 1454 162 85 22 chr5 20651 20923 -203064609 - AluJo SINE Alu -23 289 1 314 93 23 0 chr5 20923 20966 -203064566 - Alu SINE Alu -257 44 1 405 256 109 0 chr5 21040 21196 -203064336 - L1MC5 LINE L1 -428 7533 7361 516 275 34 22 chr5 21499 21677 -203063855 + MIR SINE MIR 34 213 -49 384 324 49 0 chr5 21980 22122 -203063410 - MIR3 SINE MIR -17 191 43 5632 151 32 23 chr5 22578 24144 -203061388 - L1M2 LINE L1 -512 5788 4211 1977 110 23 3 chr5 24304 24605 -203060927 + AluSc SINE Alu 1 307 -2 1031 65 87 0 chr5 24605 24743 -203060789 + AluSp SINE Alu 134 283 -30 42 20 0 0 chr5 25640 25689 -203059843 + GC_rich Low_complexity Low_complexity 1 49 0 2051 122 0 16 chr5 26677 26980 -203058552 + AluSx SINE Alu 3 300 -12 22 0 0 0 chr5 27264 27286 -203058246 + AT_rich Low_complexity Low_complexity 1 22 0 1103 80 7 0 chr5 27472 27610 -203057922 + AluSq/x SINE Alu 1 139 -173 367 286 25 8 chr5 27871 27990 -203057542 - MIR SINE MIR -50 212 92 369 309 79 0 chr5 28521 28660 -203056872 + MER91A DNA MER1_type 13 162 -34 2236 4 96 0 chr5 29712 29963 -203055569 - AluYa5 SINE Alu -11 300 26 337 323 186 4 chr5 30877 31140 -203054392 + L1ME LINE L1 5512 5822 -299 2493 74 0 0 chr5 31159 31456 -203054076 + AluSx SINE Alu 7 303 -9 7436 108 45 25 chr5 32104 32502 -203053030 + HSMAR2 DNA Mariner 135 524 -778 2021 121 24 3 chr5 32502 32791 -203052741 + AluSx SINE Alu 2 296 -16 7436 108 45 25 chr5 32791 33121 -203052411 + HSMAR2 DNA Mariner 524 846 -456 2217 129 0 0 chr5 33121 33416 -203052116 - AluSx SINE Alu -17 295 1 7436 108 45 25 chr5 33416 33625 -203051907 + HSMAR2 DNA Mariner 846 1049 -253 2137 115 3 23 chr5 33625 33930 -203051602 + AluSq SINE Alu 1 299 -14 7436 108 45 25 chr5 33930 34135 -203051397 + HSMAR2 DNA Mariner 1049 1302 0 996 136 13 0 chr5 34436 34591 -203050941 + FRAM SINE Alu 8 164 -12 2614 40 0 0 chr5 34593 34889 -203050643 + AluY SINE Alu 1 296 -15 810 221 55 3 chr5 35004 35197 -203050335 + MLT1F1 LTR MaLR 7 251 -298 1230 85 7 0 chr5 35371 35547 -203049985 - AluSg/x SINE Alu 0 307 131 2551 68 3 0 chr5 35548 35856 -203049676 - AluSx SINE Alu -3 309 1 410 119 13 0 chr5 35968 36044 -203049488 - L1P5 LINE L1 -703 5451 5375 265 234 0 16 chr5 36039 36103 -203049429 + L1ME4a LINE L1 5598 5660 -461 * 369 0 0 0 chr5 36103 36144 -203049388 + (CA)n Simple_repeat Simple_repeat 2 42 0 301 269 83 0 chr5 36259 36367 -203049165 + L1ME4a LINE L1 6003 6119 -2 554 203 0 70 chr5 36510 36638 -203048894 + L1MC4a LINE L1 6699 6817 -991 189 0 0 0 chr5 36663 36684 -203048848 + (GGA)n Simple_repeat Simple_repeat 3 23 0 25 0 0 0 chr5 37595 37620 -203047912 + AT_rich Low_complexity Low_complexity 1 25 0 2589 40 10 0 chr5 37844 38148 -203047384 - AluY SINE Alu -4 307 1 517 277 117 0 chr5 38609 38746 -203046786 - L1MC/D LINE L1 -2177 5631 5479 2273 120 0 0 chr5 38796 39105 -203046427 + AluSx SINE Alu 1 309 -3 860 249 175 25 chr5 39328 39722 -203045810 + MLT1H LTR MaLR 91 543 -6 2207 107 7 0 chr5 39779 40070 -203045462 + AluSx SINE Alu 1 293 -19 1569 264 114 20 chr5 40166 40659 -203044873 + MLT1E LTR MaLR 3 541 -52 2394 79 0 3 chr5 40781 41086 -203044446 - AluY SINE Alu -1 310 7 2235 97 0 4 chr5 41253 41568 -203043964 + AluSx SINE Alu 5 318 0 618 84 21 42 chr5 41759 41854 -203043678 + MSTB1 LTR MaLR 340 432 0 1619 217 72 0 chr5 41873 42260 -203043272 + MLT1E1 LTR MaLR 225 639 -15 380 220 110 0 chr5 42260 42378 -203043154 + L1M4 LINE L1 2258 2388 -3758 2428 86 7 0 chr5 42397 42701 -203042831 - AluY SINE Alu -5 306 1 1459 180 11 123 chr5 42702 42961 -203042571 + L1M4 LINE L1 4837 5123 -1023 2150 147 0 3 chr5 42961 43274 -203042258 - AluSx SINE Alu 0 312 1 1459 180 11 123 chr5 43274 43364 -203042168 + L1M4 LINE L1 5123 5221 -925 2306 105 0 0 chr5 43364 43659 -203041873 + AluSg1 SINE Alu 1 295 -14 1459 180 11 123 chr5 43659 43683 -203041849 + L1M4 LINE L1 5221 5151 -995 2227 126 3 0 chr5 43683 43992 -203041540 + AluSx SINE Alu 1 310 -2 1459 180 11 123 chr5 43992 44089 -203041443 + L1M4 LINE L1 5150 5256 -890 2350 130 15 44 chr5 44089 44289 -203041243 + MSTB LTR MaLR 1 184 -242 2977 9 0 0 chr5 44289 44604 -203040928 + AluYb8 SINE Alu 1 315 -3 2350 130 15 44 chr5 44604 44811 -203040721 + MSTB LTR MaLR 184 396 -30 989 185 0 25 chr5 44812 45012 -203040520 - AluJb SINE Alu -2 310 116 743 168 0 0 chr5 45083 45196 -203040336 + FLAM_C SINE Alu 21 133 -10 1764 148 17 27 chr5 45361 45658 -203039874 + AluJb SINE Alu 5 298 -14 234 0 0 0 chr5 46058 46084 -203039448 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2046 132 3 3 chr5 46096 46385 -203039147 + AluSq SINE Alu 1 289 -24 21 0 0 0 chr5 46385 46406 -203039126 + AT_rich Low_complexity Low_complexity 1 21 0 765 142 42 0 chr5 46409 46529 -203039003 - FLAM_A SINE Alu -8 125 1 2011 111 0 62 chr5 46547 46872 -203038660 - MER1B DNA MER1_type 0 339 35 409 362 97 13 chr5 47109 47246 -203038286 + L2 LINE L2 1991 2115 -1199 2310 95 3 10 chr5 47246 47552 -203037980 - AluSp SINE Alu -9 304 1 409 362 97 13 chr5 47552 48093 -203037439 + L2 LINE L2 2115 2726 -588 2958 76 39 7 chr5 48404 48836 -203036696 + L1PA8 LINE L1 5697 6142 -30 2215 103 10 3 chr5 49055 49365 -203036167 - AluSx SINE Alu 0 312 1 2374 91 0 7 chr5 49648 49955 -203035577 + AluSx SINE Alu 1 305 -7 1869 150 0 11 chr5 50030 50316 -203035216 + AluJb SINE Alu 1 283 -29 226 0 0 0 chr5 50316 50341 -203035191 + (CAAA)n Simple_repeat Simple_repeat 2 128 0 288 255 104 32 chr5 50384 50557 -203034975 + L1PB4 LINE L1 5638 5828 -477 294 202 0 0 chr5 50558 50619 -203034913 + L1PB4 LINE L1 6094 6154 -2 * 355 235 20 0 chr5 50611 50709 -203034823 + L1MC4a LINE L1 5812 5911 -1897 2385 108 3 0 chr5 50882 51188 -203034344 - AluSx SINE Alu -5 307 1 1306 52 0 0 chr5 51584 51739 -203033793 - AluY SINE Alu 0 311 157 2899 234 57 18 chr5 51843 52614 -203032918 - MER54A LTR ERVL -98 803 3 2072 97 11 4 chr5 53144 53440 -203032092 + AluSx SINE Alu 15 312 0 1804 153 7 17 chr5 53536 53830 -203031702 - AluSq SINE Alu -22 291 1 1025 240 16 29 chr5 54062 54100 -203031432 - MIR SINE MIR -21 241 204 1466 139 0 5 chr5 54100 54309 -203031223 - AluJb SINE Alu -18 294 87 1025 240 16 29 chr5 54309 54512 -203031020 - MIR SINE MIR -58 204 3 1351 158 132 19 chr5 54592 54857 -203030675 - AluJb SINE Alu -5 297 3 1135 240 117 36 chr5 55172 55690 -203029842 - MLT1F1 LTR MaLR 0 567 4 2693 82 26 87 chr5 55736 56501 -203029031 + SVA Other Other 396 868 -520 821 82 13 63 chr5 56994 57153 -203028379 - AluY SINE Alu -156 155 5 443 271 129 19 chr5 57158 57313 -203028219 - MLT1E LTR MaLR -452 141 13 301 194 49 13 chr5 57524 57627 -203027905 + MIR SINE MIR 15 158 -104 1422 103 42 0 chr5 57629 57843 -203027689 - MSTC LTR MaLR -205 223 1 345 135 0 0 chr5 57991 58043 -203027489 + L1MD2 LINE L1 5541 5592 -650 3102 186 57 28 chr5 58109 58199 -203027333 + L1MD2 LINE L1 5596 5682 -677 2177 119 3 0 chr5 58199 58513 -203027019 + AluSx SINE Alu 1 312 0 3102 186 57 28 chr5 58513 58898 -203026634 + L1MD2 LINE L1 5682 6102 -257 1906 154 13 19 chr5 58898 59210 -203026322 - AluJo SINE Alu -2 310 1 3102 186 57 28 chr5 59210 59453 -203026079 + L1MD2 LINE L1 6102 6336 -23 2368 92 0 19 chr5 59597 59912 -203025620 + AluSc SINE Alu 1 309 0 487 296 111 74 chr5 59921 60412 -203025120 + L2 LINE L2 2275 2746 -567 1120 113 50 134 chr5 60412 60732 -203024800 + AluJb SINE Alu 1 293 -9 487 296 111 74 chr5 60732 61237 -203024295 + L2 LINE L2 2746 3313 0 368 234 43 0 chr5 61243 61337 -203024195 + MIR SINE MIR 47 144 -118 258 136 106 15 chr5 61339 61405 -203024127 - LTR16A1 LTR ERVL -2 455 384 1251 83 21 47 chr5 61736 61928 -203023604 + AluSx SINE Alu 1 187 -125 196 194 0 0 chr5 64164 64200 -203021332 - L2 LINE L2 -17 3255 3220 2041 151 0 0 chr5 64567 64859 -203020673 + AluSx SINE Alu 1 292 -20 2523 71 0 0 chr5 65052 65349 -203020183 - AluSg SINE Alu -13 297 1 691 145 8 0 chr5 66882 66999 -203018533 - MER46A DNA MER2_type -1 235 118 410 143 312 0 chr5 67004 67081 -203018451 + AluJ/FLAM SINE Alu 2 102 -210 300 269 39 0 chr5 67287 67365 -203018167 + L2 LINE L2 3191 3271 -1 2085 118 35 0 chr5 68131 68419 -203017113 + AluSq SINE Alu 1 298 -15 2414 108 0 0 chr5 68760 69067 -203016465 - AluSq SINE Alu -6 307 1 1826 141 27 37 chr5 69264 69561 -203015971 + AluJo SINE Alu 1 294 -18 883 119 13 50 chr5 70430 70589 -203014943 + FRAM SINE Alu 1 40 0 1874 134 10 38 chr5 70589 70881 -203014651 + AluJb SINE Alu 4 287 -25 530 271 177 0 chr5 71190 71393 -203014139 + MIR SINE MIR 3 241 -21 1839 126 61 24 chr5 71822 72115 -203013417 - AluSq SINE Alu -9 304 1 613 22 0 82 chr5 74577 74712 -203010820 + (TA)n Simple_repeat Simple_repeat 2 125 0 2045 135 0 0 chr5 74933 75221 -203010311 + AluJb SINE Alu 1 288 -24 246 251 97 101 chr5 76265 76415 -203009117 - L2 LINE L2 -1 3312 3163 2992 126 37 0 chr5 76415 76876 -203008656 + L1PA16 LINE L1 5686 6163 -3 246 251 97 101 chr5 76876 76889 -203008643 - L2 LINE L2 -150 3163 3151 2109 98 7 7 chr5 76889 77174 -203008358 + AluSx SINE Alu 12 296 -16 246 251 97 101 chr5 77174 77216 -203008316 - L2 LINE L2 -162 3151 3107 2049 82 48 4 chr5 77998 78291 -203007241 + AluY SINE Alu 1 305 0 300 118 71 35 chr5 78819 78989 -203006543 + (CA)n Simple_repeat Simple_repeat 1 176 0 380 121 80 12 chr5 79071 79491 -203006041 + (CA)n Simple_repeat Simple_repeat 1 448 0 342 119 66 37 chr5 80031 80275 -203005257 + (CA)n Simple_repeat Simple_repeat 1 251 0 2501 212 60 6 chr5 81203 81825 -203003707 + LTR34 LTR ERV1 1 655 -44 2090 118 0 4 chr5 81830 82110 -203003422 + AluSx SINE Alu 1 279 -33 270 237 22 0 chr5 82885 83024 -203002508 + G-rich Low_complexity Low_complexity 4 145 0 410 261 6 0 chr5 83043 83219 -203002313 + G-rich Low_complexity Low_complexity 3 179 0 374 250 0 0 chr5 83222 83338 -203002194 + (CTGGGG)n Simple_repeat Simple_repeat 3 118 0 11052 126 9 21 chr5 84653 86449 -202999083 - L1P LINE L1 -4360 1786 11 353 189 19 39 chr5 88363 88579 -202996953 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 420 220 11 40 chr5 88605 88782 -202996750 + (CACCAT)n Simple_repeat Simple_repeat 6 177 0 2127 120 0 3 chr5 91267 91567 -202993965 - AluSg SINE Alu -11 299 1 930 291 79 34 chr5 91821 92288 -202993244 + L1ME1 LINE L1 5670 6157 -9 306 261 71 82 chr5 92293 92477 -202993055 + HAL1 LINE L1 1549 1730 -777 2253 97 3 7 chr5 92486 92785 -202992747 + AluSx SINE Alu 1 298 -14 508 298 143 24 chr5 93016 93435 -202992097 + HAL1 LINE L1 2039 2507 0 338 272 52 87 chr5 93711 93998 -202991534 + MLT1J LTR MaLR 225 501 -10 322 256 43 38 chr5 94562 94857 -202990675 + MLT1D LTR MaLR 89 389 -78 231 211 26 53 chr5 96536 96650 -202988882 + (CA)n Simple_repeat Simple_repeat 2 112 0 268 108 20 138 chr5 96763 96958 -202988574 + (CACAG)n Simple_repeat Simple_repeat 1 172 0 262 155 5 102 chr5 96909 97096 -202988436 + (CACG)n Simple_repeat Simple_repeat 3 171 0 * 201 222 0 81 chr5 97127 97312 -202988220 + (CA)n Simple_repeat Simple_repeat 1 170 0 1084 57 0 0 chr5 100051 100174 -202985358 + AluY SINE Alu 1 123 -188 1154 158 0 0 chr5 100342 100513 -202985019 + AluJb SINE Alu 135 305 -7 751 253 50 56 chr5 102579 102899 -202982633 - MLT2C1 LTR ERVL -65 332 15 233 222 0 0 chr5 103212 103257 -202982275 + MIR SINE MIR 112 156 -106 2502 194 16 8 chr5 104426 104925 -202980607 + L1MC1 LINE L1 5430 5932 -401 1366 186 37 93 chr5 104916 105466 -202980066 + L1M3 LINE L1 5065 5582 -601 * 2012 61 0 0 chr5 105566 105830 -202979702 + L1HS LINE L1 5892 6155 0 207 69 0 0 chr5 105830 105859 -202979673 + (A)n Simple_repeat Simple_repeat 1 29 0 2272 123 7 0 chr5 105960 106262 -202979270 + AluSx SINE Alu 1 304 -8 580 279 47 12 chr5 107021 107193 -202978339 - MER45A DNA AcHobo 0 178 1 354 138 55 9 chr5 107477 107586 -202977946 + CT-rich Low_complexity Low_complexity 4 117 0 27 0 0 0 chr5 107592 107619 -202977913 + AT_rich Low_complexity Low_complexity 1 27 0 1062 292 77 47 chr5 110776 111876 -202973656 - L1ME LINE L1 -486 5684 4549 1163 233 60 6 chr5 112333 112650 -202972882 + MLT1A1 LTR MaLR 20 353 -12 1709 248 128 4 chr5 113668 114184 -202971348 - MER82 DNA MER2_type -1 652 73 502 226 10 36 chr5 114488 114938 -202970594 + (CA)n Simple_repeat Simple_repeat 1 438 0 263 194 39 0 chr5 114965 115068 -202970464 + (CA)n Simple_repeat Simple_repeat 1 107 0 408 147 16 79 chr5 115150 115340 -202970192 + (CA)n Simple_repeat Simple_repeat 2 179 0 888 266 18 39 chr5 116885 117216 -202968316 - MER33 DNA MER1_type 0 324 1 252 293 0 0 chr5 117241 117316 -202968216 + MER58A DNA MER1_type 36 110 -114 4925 200 58 24 chr5 118434 118702 -202966830 - Tigger3b DNA MER2_type -1816 1212 955 2436 83 0 3 chr5 118702 119002 -202966530 + AluY SINE Alu 1 299 -12 4925 200 58 24 chr5 119002 119902 -202965630 - Tigger3b DNA MER2_type -2073 955 4 646 228 53 0 chr5 120427 120598 -202964934 + MER5A DNA MER1_type 5 184 -5 21 36 0 0 chr5 121098 121126 -202964406 + AT_rich Low_complexity Low_complexity 1 28 0 386 304 89 5 chr5 121230 121363 -202964169 + Charlie5 DNA MER1_type 2391 2550 -74 1911 161 0 32 chr5 121363 121679 -202963853 - AluJb SINE Alu -2 310 5 386 304 89 5 chr5 121679 121759 -202963773 + Charlie5 DNA MER1_type 2550 2622 -2 226 340 19 19 chr5 122182 122288 -202963244 - L3b LINE CR1 -228 1355 1250 2478 21 0 0 chr5 122354 122680 -202962852 - L1HS LINE L1 -2832 3314 2989 * 17028 16 0 0 chr5 122677 125512 -202960020 + L1HS LINE L1 3321 6155 0 24 0 0 0 chr5 125512 125536 -202959996 + AT_rich Low_complexity Low_complexity 1 24 0 532 161 0 0 chr5 125643 125724 -202959808 + AluS SINE Alu 2 82 -231 1296 202 87 39 chr5 126996 127170 -202958362 - MLT1B LTR MaLR -16 374 210 2154 107 0 20 chr5 127170 127468 -202958064 - AluSg SINE Alu -18 292 1 1296 202 87 39 chr5 127468 127649 -202957883 - MLT1B LTR MaLR -180 210 2 2298 116 7 0 chr5 128091 128393 -202957139 + AluSx SINE Alu 1 304 -8 399 290 53 24 chr5 129438 129645 -202955887 - MLT1H LTR MaLR -4 545 333 362 272 28 15 chr5 129702 129861 -202955671 - MLT1H LTR MaLR -381 168 21 336 211 279 42 chr5 131557 131747 -202953785 - MLT1E1 LTR MaLR 0 654 420 487 254 101 21 chr5 131807 131996 -202953536 - MLT1E1 LTR MaLR -383 271 68 4027 197 11 5 chr5 133125 133933 -202951599 + L1MB3 LINE L1 5368 6180 -3 205 195 0 0 chr5 134265 134306 -202951226 + A-rich Low_complexity Low_complexity 1 41 0 2586 186 10 46 chr5 134507 134594 -202950938 + L1MA8 LINE L1 5260 5349 -942 2873 16 0 0 chr5 134594 134900 -202950632 + AluYb8 SINE Alu 3 308 -10 2586 186 10 46 chr5 134900 135399 -202950133 + L1MA8 LINE L1 5349 5825 -466 1419 245 90 25 chr5 135430 135495 -202950037 + L1MA9 LINE L1 5768 5827 -485 2204 118 0 13 chr5 135495 135801 -202949731 + AluSq SINE Alu 1 302 -11 1419 245 90 25 chr5 135801 136248 -202949284 + L1MA9 LINE L1 5827 6312 0 32 75 0 0 chr5 136256 136323 -202949209 + AT_rich Low_complexity Low_complexity 1 67 0 540 318 37 16 chr5 136736 136981 -202948551 + MLT1A1 LTR MaLR 116 365 0 575 261 73 9 chr5 136987 137205 -202948327 - MLT1E1 LTR MaLR -5 649 418 354 283 51 8 chr5 137262 137424 -202948108 - MLT1E3 LTR MaLR -382 272 95 591 267 80 13 chr5 139646 140088 -202945444 + L1ME2 LINE L1 5043 5517 -645 1052 249 22 11 chr5 140092 140369 -202945163 - L1MA6 LINE L1 -36 6264 5985 438 321 26 19 chr5 140383 140621 -202944911 + L1ME2 LINE L1 5536 5780 -384 605 266 30 94 chr5 140744 141116 -202944416 + L1ME2 LINE L1 5804 6151 -13 21 0 0 0 chr5 141286 141307 -202944225 + AT_rich Low_complexity Low_complexity 1 21 0 457 174 43 0 chr5 141400 141492 -202944040 + MER85 DNA T2_type 32 127 -12 24 32 0 0 chr5 143678 143709 -202941823 + AT_rich Low_complexity Low_complexity 1 31 0 1985 100 14 60 chr5 146374 146559 -202938973 - THE1C LTR MaLR -40 335 172 2419 94 3 0 chr5 146559 146866 -202938666 + AluSg1 SINE Alu 1 308 -1 1985 100 14 60 chr5 146866 147031 -202938501 - THE1C LTR MaLR -203 172 1 197 328 0 0 chr5 148185 148243 -202937289 - MIR SINE MIR -111 151 94 444 298 82 21 chr5 149022 149351 -202936181 - L1ME4a LINE L1 0 6121 5773 433 272 151 8 chr5 149360 149599 -202935933 - MLT1C LTR MaLR -8 459 187 751 198 38 17 chr5 149764 149974 -202935558 - MLT1C LTR MaLR -176 214 1 1141 246 107 17 chr5 151423 151825 -202933707 + MLT1C LTR MaLR 1 438 -29 602 313 9 33 chr5 152666 152877 -202932655 + MIR SINE MIR 24 229 -33 552 182 19 71 chr5 153037 153191 -202932341 - MLT2D LTR ERVL -8 406 261 888 269 32 3 chr5 153341 153623 -202931909 - MLT2D LTR ERVL -108 306 17 812 200 47 0 chr5 156899 157069 -202928463 + MER58A DNA MER1_type 46 223 -1 335 224 22 60 chr5 157173 157307 -202928225 + L1ME4a LINE L1 5966 6094 -27 2162 99 0 0 chr5 157309 157633 -202927899 - AluSx SINE Alu 0 324 1 395 250 0 49 chr5 157807 157951 -202927581 + GA-rich Low_complexity Low_complexity 1 137 0 659 228 183 0 chr5 162196 162420 -202923112 - L1MB7 LINE L1 -2 6182 5918 2852 92 11 0 chr5 162433 162803 -202922729 - THE1C LTR MaLR -1 374 1 403 183 12 0 chr5 162821 162903 -202922629 + L1M4 LINE L1 5683 5765 -409 321 333 0 41 chr5 165297 165444 -202920088 - MIR SINE MIR -8 254 114 315 213 0 0 chr5 166158 166233 -202919299 + (TG)n Simple_repeat Simple_repeat 2 76 0 464 292 111 58 chr5 166442 166685 -202918847 + MLT1J LTR MaLR 245 500 -11 905 248 50 5 chr5 167689 168068 -202917464 - L1ME LINE L1 -2805 3275 2880 338 273 80 0 chr5 168168 168256 -202917276 - L1ME LINE L1 -4309 1952 1858 522 280 149 12 chr5 168264 168432 -202917100 - L1ME LINE L1 -4436 1825 1635 339 270 109 80 chr5 168441 169077 -202916455 - L1ME LINE L1 -4682 1579 837 1963 130 7 10 chr5 169077 169376 -202916156 + AluSx SINE Alu 1 298 -14 339 270 109 80 chr5 169376 169698 -202915834 - L1ME LINE L1 -5424 837 526 334 271 30 78 chr5 170050 170216 -202915316 - MLT1J2 LTR MaLR -21 429 272 226 314 24 65 chr5 170433 170557 -202914975 + L2 LINE L2 3100 3218 -54 269 335 86 18 chr5 170748 171156 -202914376 + L2 LINE L2 2572 3239 -74 2359 179 28 13 chr5 171230 171687 -202913845 + MLT2B3 LTR ERVL 1 464 -90 217 246 0 0 chr5 171687 171744 -202913788 + (TA)n Simple_repeat Simple_repeat 2 58 0 293 256 0 0 chr5 171744 171834 -202913698 - L1MC4 LINE L1 -1339 6703 6614 264 149 0 0 chr5 171921 171968 -202913564 + (CA)n Simple_repeat Simple_repeat 2 48 0 202 259 0 35 chr5 172051 172109 -202913423 + MIR SINE MIR 12 67 -195 215 173 19 0 chr5 172251 172303 -202913229 + CT-rich Low_complexity Low_complexity 1 53 0 1021 244 17 27 chr5 173046 173341 -202912191 + MLT1E LTR MaLR 302 593 0 647 205 53 16 chr5 174428 174618 -202910914 + L1MB7 LINE L1 5987 6183 -1 885 159 0 0 chr5 174697 174829 -202910703 + FLAM_C SINE Alu 1 132 -11 237 33 0 0 chr5 174896 174926 -202910606 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 250 245 136 71 chr5 174950 175105 -202910427 + L1MC5 LINE L1 7749 7913 -48 524 292 87 14 chr5 178601 178878 -202906654 - MLT1I LTR MaLR 0 409 113 696 271 138 35 chr5 179151 179491 -202906041 + MLT1E LTR MaLR 1 375 -218 771 146 0 15 chr5 179514 179644 -202905888 - THE1B LTR MaLR -1 363 236 1271 95 0 0 chr5 179645 179813 -202905719 + L1PA7 LINE L1 5983 6150 -4 2944 86 2 0 chr5 179835 180263 -202905269 - THE1B-int LTR MaLR -1151 429 1 1700 168 75 23 chr5 180263 180609 -202904923 - THE1B LTR MaLR 0 364 1 623 271 47 5 chr5 180614 180806 -202904726 + MLT1E LTR MaLR 394 593 0 327 331 14 0 chr5 180813 180955 -202904577 + MLT1E-int LTR MaLR 15 158 -1213 270 258 56 0 chr5 181094 181183 -202904349 + MLT1E-int LTR MaLR 442 535 -836 191 288 50 12 chr5 181746 181826 -202903706 + L2 LINE L2 3185 3267 -5 220 294 234 22 chr5 181933 182117 -202903415 - L2 LINE L2 -6 3307 3085 1890 218 21 42 chr5 182244 182721 -202902811 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr5 187987 188022 -202897510 + GC_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 188240 188273 -202897259 + GC_rich Low_complexity Low_complexity 1 33 0 198 182 26 26 chr5 190110 190187 -202895345 + G-rich Low_complexity Low_complexity 3 79 0 26 30 0 0 chr5 192293 192326 -202893206 + GC_rich Low_complexity Low_complexity 1 33 0 408 307 0 51 chr5 193466 193756 -202891776 + C-rich Low_complexity Low_complexity 1 275 0 22 35 0 0 chr5 193900 193929 -202891603 + GC_rich Low_complexity Low_complexity 1 29 0 224 217 0 0 chr5 195403 195449 -202890083 + G-rich Low_complexity Low_complexity 5 50 0 2521 37 0 0 chr5 195687 195982 -202889550 + AluY SINE Alu 1 295 -16 201 74 0 0 chr5 196571 196598 -202888934 + (CCG)n Simple_repeat Simple_repeat 2 28 0 315 71 0 0 chr5 200197 200239 -202885293 + (T)n Simple_repeat Simple_repeat 1 42 0 220 204 0 0 chr5 200444 200493 -202885039 + CT-rich Low_complexity Low_complexity 5 53 0 232 151 12 70 chr5 200511 200597 -202884935 + CT-rich Low_complexity Low_complexity 1 81 0 252 272 10 48 chr5 201241 201344 -202884188 + G-rich Low_complexity Low_complexity 2 100 0 360 0 0 0 chr5 202415 202455 -202883077 + (CA)n Simple_repeat Simple_repeat 2 41 0 251 213 21 0 chr5 203729 203823 -202881709 + (CACG)n Simple_repeat Simple_repeat 4 99 0 433 219 0 22 chr5 203836 204019 -202881513 + (CACG)n Simple_repeat Simple_repeat 1 179 0 439 218 0 23 chr5 204049 204401 -202881131 + (CACG)n Simple_repeat Simple_repeat 1 343 0 347 233 0 14 chr5 204435 204581 -202880951 + (CACG)n Simple_repeat Simple_repeat 4 147 0 320 217 0 43 chr5 204611 204795 -202880737 + (CACG)n Simple_repeat Simple_repeat 4 179 0 * 357 263 0 0 chr5 204788 204963 -202880569 + (CA)n Simple_repeat Simple_repeat 1 175 0 217 355 0 11 chr5 205017 205110 -202880422 + (CA)n Simple_repeat Simple_repeat 1 92 0 222 191 0 0 chr5 207035 207077 -202878455 + (CGG)n Simple_repeat Simple_repeat 1 42 0 217 317 12 12 chr5 207542 207703 -202877829 + C-rich Low_complexity Low_complexity 2 162 0 265 339 0 0 chr5 210127 210254 -202875278 + HERVL LTR ERVL 907 1033 -4621 1435 166 26 12 chr5 210825 211312 -202874220 + MER50 LTR ERV1 1 711 -23 1613 177 53 29 chr5 211313 211692 -202873840 - MSTC LTR MaLR -40 388 1 463 266 120 66 chr5 211694 212028 -202873504 + HERVL LTR ERVL 1678 2029 -3735 246 347 73 0 chr5 212855 212979 -202872553 + L2 LINE L2 3178 3310 -3 476 269 62 10 chr5 213809 214017 -202871515 + MER20 DNA MER1_type 1 219 0 189 0 0 0 chr5 215148 215169 -202870363 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1484 158 57 0 chr5 220459 220705 -202864827 - AluJo SINE Alu -9 303 44 1133 303 77 0 chr5 221007 221472 -202864060 + L1MC2 LINE L1 5832 6332 -12 554 206 19 7 chr5 221478 221633 -202863899 + GA-rich Low_complexity Low_complexity 2 158 0 1072 172 62 10 chr5 221633 221842 -202863690 + AluJo SINE Alu 1 220 -92 259 211 13 40 chr5 223366 223442 -202862090 + G-rich Low_complexity Low_complexity 3 76 0 271 360 65 13 chr5 228598 228751 -202856781 + MIR3 SINE MIR 18 178 -30 332 323 45 0 chr5 228762 228917 -202856615 - MLT1B LTR MaLR -2 652 491 334 358 0 15 chr5 228932 229066 -202856466 + (CGTG)n Simple_repeat Simple_repeat 4 135 0 515 358 78 51 chr5 229726 230410 -202855122 + L1MEc LINE L1 810 1475 -4921 343 295 20 81 chr5 230543 230692 -202854840 + L1MC4 LINE L1 6563 6702 -1340 * 347 256 22 44 chr5 230682 230772 -202854760 + L1MC4 LINE L1 6615 6702 -1340 221 381 0 11 chr5 230774 230955 -202854577 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1982 110 29 0 chr5 231440 231738 -202853794 + AluSx SINE Alu 1 306 0 431 283 23 34 chr5 234661 234838 -202850694 - MLT1C LTR MaLR -227 240 66 2205 102 0 7 chr5 236334 236638 -202848894 + AluSp SINE Alu 1 302 -11 911 211 154 0 chr5 241674 241953 -202843579 - MLT1B LTR MaLR -68 322 1 21 0 0 0 chr5 244115 244136 -202841396 + AT_rich Low_complexity Low_complexity 1 21 0 236 253 0 11 chr5 244666 244753 -202840779 + G-rich Low_complexity Low_complexity 3 88 0 3055 238 63 16 chr5 245507 245648 -202839884 - Charlie1 DNA MER1_type -2 2759 2626 2044 108 14 0 chr5 245648 245935 -202839597 + AluSg SINE Alu 2 292 -18 3055 238 63 16 chr5 245935 246340 -202839192 - Charlie1 DNA MER1_type -135 2626 2241 2350 73 0 16 chr5 246340 246643 -202838889 - AluSq SINE Alu -15 298 1 3055 238 63 16 chr5 246643 247063 -202838469 - Charlie1 DNA MER1_type -520 2241 1747 270 191 0 76 chr5 247265 247397 -202838135 + (CCCCG)n Simple_repeat Simple_repeat 1 121 0 768 211 112 12 chr5 247476 247718 -202837814 - MLT1A1 LTR MaLR -99 266 1 2032 120 0 0 chr5 251203 251509 -202834023 + AluSx SINE Alu 3 308 0 1312 260 65 38 chr5 251533 252013 -202833519 + L1MDa LINE L1 20 512 -6028 296 210 49 0 chr5 252086 252167 -202833365 + L1MA7 LINE L1 6205 6289 -2 * 640 239 54 33 chr5 252160 252292 -202833240 + L1MDa LINE L1 2454 2582 -3958 2034 100 20 13 chr5 252292 252592 -202832940 + AluSg SINE Alu 6 307 -3 640 239 54 33 chr5 252592 252789 -202832743 + L1MDa LINE L1 2582 2788 -3752 534 287 16 0 chr5 252789 252918 -202832614 - ERVL LTR ERVL -3721 2043 1913 853 217 107 4 chr5 253057 253301 -202832231 + MLT1C LTR MaLR 6 274 -193 341 324 0 0 chr5 253608 253784 -202831748 + GA-rich Low_complexity Low_complexity 4 179 0 626 215 67 53 chr5 253794 254003 -202831529 + MLT1C LTR MaLR 256 467 0 322 281 78 39 chr5 255218 255346 -202830186 - L1ME4a LINE L1 -11 6110 5978 308 338 61 25 chr5 255784 255982 -202829550 - L1ME4a LINE L1 -756 5390 5186 420 340 92 33 chr5 256013 256439 -202829093 + L1MEc LINE L1 2157 2564 -3651 245 309 12 0 chr5 256547 256628 -202828904 + L1MEc LINE L1 2794 2875 -3340 697 316 112 13 chr5 256682 257372 -202828160 + L1MEc LINE L1 2991 3748 -2467 219 286 0 0 chr5 257628 257684 -202827848 + C-rich Low_complexity Low_complexity 1 56 0 305 342 70 70 chr5 258225 258538 -202826994 - HAL1 LINE L1 -948 1559 1247 339 270 0 0 chr5 258540 258778 -202826754 + CT-rich Low_complexity Low_complexity 1 238 0 1288 189 84 3 chr5 260367 260692 -202824840 + MLT1B LTR MaLR 15 379 -11 657 298 67 53 chr5 262223 262376 -202823156 + L1MC5 LINE L1 6448 6597 -1211 2309 81 3 0 chr5 262376 262673 -202822859 - AluSx SINE Alu -14 298 1 657 298 67 53 chr5 262673 263029 -202822503 + L1MC5 LINE L1 6597 6902 -906 723 185 71 28 chr5 263065 263411 -202822121 + MSTC LTR MaLR 1 427 -1 1519 216 120 40 chr5 263411 264060 -202821472 + L1MC5 LINE L1 6994 7694 -267 2464 171 23 12 chr5 264129 264557 -202820975 - Tigger2a DNA MER2_type 0 434 2 271 260 76 18 chr5 267526 267642 -202817890 + LTR50 LTR ERVL 327 447 -76 2124 165 49 180 chr5 267985 268795 -202816737 - L1MB3 LINE L1 0 6183 5480 1804 171 3 3 chr5 270091 270396 -202815136 - AluJb SINE Alu -7 305 1 1452 188 124 3 chr5 270421 270767 -202814765 + L1MC2 LINE L1 5941 6328 -16 429 260 19 0 chr5 272014 272118 -202813414 - MER117 DNA MER1_type -53 144 39 29 28 0 0 chr5 272972 273008 -202812524 + AT_rich Low_complexity Low_complexity 1 36 0 234 286 13 0 chr5 275126 275203 -202810329 + L1MC4 LINE L1 7960 8037 -5 591 248 170 47 chr5 277180 277588 -202807944 - MLT1H1 LTR MaLR 0 555 44 188 228 18 0 chr5 278348 278405 -202807127 + (TG)n Simple_repeat Simple_repeat 2 59 0 520 271 67 5 chr5 279215 279419 -202806113 - MER20 DNA MER1_type 0 219 4 239 328 106 29 chr5 279439 279787 -202805745 - LTR16C LTR ERVL -36 455 81 1272 184 104 12 chr5 280607 280934 -202804598 + MLT1A1 LTR MaLR 1 357 -8 473 249 110 29 chr5 282368 282541 -202802991 + MER58A DNA MER1_type 35 221 -3 1900 142 0 34 chr5 282741 283064 -202802468 + AluSx SINE Alu 1 312 0 1870 158 10 0 chr5 283567 283864 -202801668 + AluJb SINE Alu 1 300 -12 1258 252 102 21 chr5 283945 284377 -202801155 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr5 284396 284418 -202801114 + AT_rich Low_complexity Low_complexity 1 22 0 4703 87 17 17 chr5 285580 286214 -202799318 - MER51A LTR ERV1 0 634 1 354 325 163 0 chr5 287076 287242 -202798290 - MIR SINE MIR -7 255 63 312 180 36 18 chr5 287387 287498 -202798034 + (CAGAGA)n Simple_repeat Simple_repeat 1 113 0 180 333 61 8 chr5 289517 289649 -202795883 - L2 LINE L2 -812 2502 2364 2083 104 7 0 chr5 289763 290051 -202795481 - AluSx SINE Alu -22 290 1 197 310 133 5 chr5 290836 291039 -202794493 - L2 LINE L2 -1102 2212 1984 2016 115 0 33 chr5 291359 291664 -202793868 + AluSx SINE Alu 1 295 -17 391 321 19 19 chr5 292508 292670 -202792862 + (CGTG)n Simple_repeat Simple_repeat 1 162 0 221 263 25 12 chr5 292678 292758 -202792774 + (TG)n Simple_repeat Simple_repeat 1 81 0 352 241 0 14 chr5 293628 293773 -202791759 + (CTGGGG)n Simple_repeat Simple_repeat 1 143 0 2309 171 18 2 chr5 294144 294541 -202790991 + MER57A LTR ERV1 1 403 0 1018 247 87 20 chr5 297345 297701 -202787831 - MLT1B LTR MaLR -7 383 4 308 272 48 32 chr5 298674 298799 -202786733 - L1ME4a LINE L1 -6 6115 5989 373 242 0 0 chr5 298961 299052 -202786480 - L1ME4a LINE L1 -204 5960 5870 * 2566 269 35 34 chr5 299050 299949 -202785583 - L1M4 LINE L1 -1946 4200 3207 1833 183 0 10 chr5 299949 300261 -202785271 - AluSx SINE Alu -3 309 1 2566 269 35 34 chr5 300261 300508 -202785024 - L1M4 LINE L1 -2939 3207 2962 23 0 0 0 chr5 300614 300637 -202784895 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 300824 300846 -202784686 + AT_rich Low_complexity Low_complexity 1 22 0 1722 171 0 4 chr5 300848 301111 -202784421 - AluJb SINE Alu -33 279 18 2249 116 3 0 chr5 301122 301424 -202784108 - AluSx SINE Alu -9 303 1 358 310 97 57 chr5 301464 301902 -202783630 - L1 LINE L1 -2742 3404 2804 1140 195 108 7 chr5 303049 303456 -202782076 + LTR45B LTR ERV1 3 603 0 182 197 148 33 chr5 304214 304275 -202781257 - MIR SINE MIR -75 133 66 2066 277 48 2 chr5 304985 305614 -202779918 - L1MB5 LINE L1 0 6174 5517 401 86 38 153 chr5 306043 306366 -202779166 + (CGGTG)n Simple_repeat Simple_repeat 1 285 0 2038 130 0 11 chr5 308732 309040 -202776492 - AluSx SINE Alu 0 305 1 1227 183 108 37 chr5 309041 309336 -202776196 - MLT2C2 LTR ERVL -146 318 3 237 125 4 1 chr5 309371 309405 -202776127 + MLT1L LTR MaLR 277 411 -100 705 119 0 2 chr5 313019 313263 -202772269 + AluSx SINE Alu 1 294 -16 501 316 30 0 chr5 315315 315483 -202770049 - MER58A DNA MER1_type -9 215 43 1093 129 0 0 chr5 315744 315891 -202769641 + AluSg/x SINE Alu 154 300 -12 369 109 0 0 chr5 315891 315946 -202769586 + (TA)n Simple_repeat Simple_repeat 2 56 0 38 39 0 0 chr5 315954 316006 -202769526 + AT_rich Low_complexity Low_complexity 1 52 0 291 331 57 57 chr5 316038 316334 -202769198 - L1MC/D LINE L1 -1944 5864 5569 383 277 64 96 chr5 316343 316908 -202768624 - L1MEd LINE L1 -968 1522 895 2370 73 0 33 chr5 316988 317291 -202768241 + AluSg SINE Alu 1 293 -17 2132 106 3 3 chr5 318058 318370 -202767162 - AluSx SINE Alu 0 312 1 271 359 48 4 chr5 318861 319240 -202766292 + L1ME LINE L1 5202 5603 -559 1198 262 43 3 chr5 320021 320372 -202765160 - MLT1A1 LTR MaLR 0 365 1 2180 128 6 6 chr5 320551 320863 -202764669 + AluSx SINE Alu 1 312 0 2174 123 7 0 chr5 321080 321365 -202764167 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 322853 322875 -202762657 + GC_rich Low_complexity Low_complexity 1 22 0 253 275 0 78 chr5 323641 323808 -202761724 + G-rich Low_complexity Low_complexity 3 156 0 316 291 127 45 chr5 324789 325033 -202760499 - L1MC4a LINE L1 -1487 6321 6058 1776 154 10 23 chr5 325056 325362 -202760170 - AluJo SINE Alu -8 304 3 305 282 106 65 chr5 327856 328266 -202757266 + MLT1B LTR MaLR 1 459 -8 193 130 0 74 chr5 328528 328582 -202756950 + (TTACG)n Simple_repeat Simple_repeat 4 53 0 965 188 96 135 chr5 330872 331228 -202754304 - MLT1C LTR MaLR -42 425 7 7284 161 95 8 chr5 331726 333450 -202752082 + L1MCa LINE L1 17 1984 -4442 3270 219 30 6 chr5 333445 333538 -202751994 + L1MCa LINE L1 3222 3311 -3115 * 2175 130 0 10 chr5 333538 333838 -202751694 + AluSx SINE Alu 1 297 -15 3270 219 30 6 chr5 333838 334694 -202750838 + L1MCa LINE L1 3311 4194 -2232 699 143 21 21 chr5 334751 334891 -202750641 + L1MC1 LINE L1 2043 2182 -4244 4893 188 49 60 chr5 334903 337333 -202748199 + L1MC1 LINE L1 4217 8065 0 359 200 21 11 chr5 339227 339322 -202746210 + MER53 DNA DNA 23 118 -71 309 298 152 36 chr5 339332 339661 -202745871 + MLT1H LTR MaLR 112 478 -71 2214 113 7 3 chr5 340961 341261 -202744271 + AluSx SINE Alu 1 301 -11 537 262 167 40 chr5 342149 342519 -202743013 + MER31A LTR ERV1 7 427 -39 4603 84 20 55 chr5 342851 343567 -202741965 - LTR8 LTR ERV1 0 691 1 508 203 23 16 chr5 343935 344063 -202741469 + MER5B DNA MER1_type 1 129 -49 4698 223 24 28 chr5 346156 347089 -202738443 + L1MB5 LINE L1 3987 4915 -1231 204 40 0 0 chr5 347089 347114 -202738418 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4698 223 24 28 chr5 347114 347438 -202738094 + L1MB5 LINE L1 4915 5239 -907 1787 125 14 7 chr5 347438 347718 -202737814 - THE1B LTR MaLR 0 364 83 2984 217 117 8 chr5 347740 348592 -202736940 + L1MB5 LINE L1 5231 6174 0 1920 174 43 34 chr5 348606 349154 -202736378 + MLT2A2 LTR ERVL 1 554 0 266 265 20 10 chr5 349161 349263 -202736269 + L1ME LINE L1 5669 5771 -350 462 220 0 0 chr5 349408 349585 -202735947 + (TA)n Simple_repeat Simple_repeat 2 178 0 2115 59 0 0 chr5 349693 349948 -202735584 + AluY SINE Alu 54 308 -3 1953 111 4 4 chr5 350962 351233 -202734299 - AluSq SINE Alu -17 296 26 27 49 0 0 chr5 351675 351716 -202733816 + AT_rich Low_complexity Low_complexity 1 41 0 338 100 0 0 chr5 352309 352359 -202733173 - MADE1 DNA Mariner 0 80 31 271 68 23 0 chr5 352399 352443 -202733089 + MADE1 DNA Mariner 36 80 0 21 36 0 0 chr5 353387 353415 -202732117 + AT_rich Low_complexity Low_complexity 1 28 0 1483 237 95 31 chr5 354914 355588 -202729944 + MER97a DNA MER1_type? 167 883 -11 1752 146 173 19 chr5 355588 355959 -202729573 + MSTA LTR MaLR 1 428 0 413 181 96 0 chr5 355959 356053 -202729479 + MLT1B LTR MaLR 288 390 0 1262 282 120 0 chr5 356053 356577 -202728955 + L1MEc LINE L1 255 841 -5555 * 3540 258 36 33 chr5 356559 358984 -202726548 + L1MEc LINE L1 1258 3639 -2576 3653 251 65 10 chr5 358986 360237 -202725295 + L1MEc LINE L1 4086 5406 -809 2267 92 3 23 chr5 360918 361222 -202724310 - AluSx SINE Alu -14 298 1 233 322 83 0 chr5 361659 361923 -202723609 - L1MEc LINE L1 -3385 2830 2545 312 278 125 17 chr5 361964 362140 -202723392 - L1MEc LINE L1 -3874 2522 2328 243 354 0 22 chr5 363152 363333 -202722199 + (TAGG)n Simple_repeat Simple_repeat 2 178 0 203 344 0 11 chr5 365408 365498 -202720034 + (CATA)n Simple_repeat Simple_repeat 1 89 0 240 35 0 0 chr5 416207 416236 -202669296 + (GGGGA)n Simple_repeat Simple_repeat 3 31 0 311 306 45 0 chr5 416302 416436 -202669096 + MER70B LTR ERVL 15 154 -424 1241 240 52 3 chr5 416779 417141 -202668391 + MER70B LTR ERVL 199 578 0 588 257 59 21 chr5 417752 417989 -202667543 + MER33 DNA MER1_type 5 250 -74 248 196 0 36 chr5 418187 418243 -202667289 + GA-rich Low_complexity Low_complexity 3 56 0 502 188 0 23 chr5 418351 418484 -202667048 + GA-rich Low_complexity Low_complexity 4 133 0 1070 31 0 0 chr5 419041 419221 -202666311 + L1PA3 LINE L1 6002 6181 0 204 40 0 0 chr5 419582 419607 -202665925 + (A)n Simple_repeat Simple_repeat 1 25 0 805 188 0 0 chr5 419623 419751 -202665781 + AluJ SINE Alu 14 141 -171 987 224 0 0 chr5 419791 419974 -202665558 + AluJ SINE Alu 121 303 -9 207 258 32 0 chr5 421333 421395 -202664137 - L2 LINE L2 -945 2369 2306 343 283 26 91 chr5 422852 423082 -202662450 - L1MEc LINE L1 -4625 1590 1376 407 312 47 13 chr5 423140 423438 -202662094 - L1MEc LINE L1 -4862 1343 1036 2077 157 0 0 chr5 423441 423741 -202661791 - AluSx SINE Alu -12 300 1 24 0 0 0 chr5 423838 423862 -202661670 + AT_rich Low_complexity Low_complexity 1 24 0 421 259 9 0 chr5 423876 423992 -202661540 - L1MA10 LINE L1 -8 6326 6210 376 180 7 167 chr5 424105 424211 -202661321 - L1ME LINE L1 -483 5683 5606 2306 124 0 6 chr5 424211 424525 -202661007 - AluSx SINE Alu 0 312 1 376 180 7 167 chr5 424525 424568 -202660964 - L1ME LINE L1 -560 5606 5558 263 128 0 0 chr5 424563 424602 -202660930 + L1M4 LINE L1 3531 3569 -2577 * 1774 169 28 22 chr5 424602 425175 -202660357 - LTR10E LTR ERV1 -6 627 1 449 302 39 12 chr5 425175 425430 -202660102 + L1M4 LINE L1 3580 3841 -2305 1901 141 61 0 chr5 425441 425718 -202659814 + AluSq SINE Alu 1 294 -19 1126 97 58 0 chr5 425718 425872 -202659660 + AluSg/x SINE Alu 132 294 -16 366 176 0 0 chr5 425951 426019 -202659513 - L1MEc LINE L1 -5591 805 738 * 41553 32 23 1 chr5 426018 432034 -202653498 - L1PA3 LINE L1 0 6155 5 1155 316 65 15 chr5 432037 432636 -202652896 - L1MEc LINE L1 -5643 753 125 242 211 42 21 chr5 432683 432778 -202652754 + (TG)n Simple_repeat Simple_repeat 1 97 0 351 201 75 19 chr5 433618 433777 -202651755 + (CA)n Simple_repeat Simple_repeat 1 168 0 222 91 0 0 chr5 433803 433836 -202651696 + (CA)n Simple_repeat Simple_repeat 1 33 0 1858 47 0 5 chr5 435785 436000 -202649532 - AluY SINE Alu -16 295 82 587 294 60 16 chr5 436115 436367 -202649165 - HAL1 LINE L1 -2226 281 19 1349 86 0 17 chr5 440945 441120 -202644412 - AluSg/x SINE Alu -19 291 120 1274 137 0 0 chr5 441457 441671 -202643861 + AluSg/x SINE Alu 112 325 0 232 242 73 40 chr5 441858 441982 -202643550 + L1MCa LINE L1 1282 1409 -5017 16664 94 40 26 chr5 442168 444708 -202640824 + Charlie3 DNA MER1_type 1 2575 -135 345 22 0 0 chr5 444711 444756 -202640776 - MADE1 DNA Mariner -1 79 35 388 314 83 12 chr5 444787 444956 -202640576 + L1MCa LINE L1 1833 2013 -4594 189 0 0 0 chr5 445133 445154 -202640378 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1713 163 3 18 chr5 445171 445454 -202640078 - AluJb SINE Alu -33 279 1 462 315 47 17 chr5 445722 445957 -202639575 + L1ME LINE L1 637 878 -5652 1145 288 51 48 chr5 446244 446285 -202639247 + L1ME LINE L1 1085 1124 -5416 2621 50 0 0 chr5 446285 446586 -202638946 + AluY SINE Alu 1 301 -10 1145 288 51 48 chr5 446586 447109 -202638423 + L1ME LINE L1 1124 1657 -4883 2480 84 0 0 chr5 447109 447419 -202638113 + AluY SINE Alu 1 310 -1 1145 288 51 48 chr5 447419 447927 -202637605 + L1ME LINE L1 1657 2162 -4378 1489 199 201 30 chr5 447927 448420 -202637112 - LTR8A LTR ERV1 -150 577 1 793 287 45 33 chr5 448445 448779 -202636753 + L1ME2 LINE L1 5797 6134 -30 1566 228 133 79 chr5 448828 449533 -202635999 + LTR1B LTR ERV1 3 745 -81 2238 112 14 0 chr5 449863 450159 -202635373 + AluSx SINE Alu 1 300 -12 1099 224 187 45 chr5 450189 450376 -202635156 + L1M4 LINE L1 3871 4030 -2116 2204 132 0 0 chr5 450376 450679 -202634853 + AluSx SINE Alu 1 303 -9 1099 224 187 45 chr5 450679 450983 -202634549 + L1M4 LINE L1 4030 4289 -1857 1904 183 3 0 chr5 450983 451294 -202634238 + AluJb SINE Alu 1 312 0 1099 224 187 45 chr5 451294 451511 -202634021 + L1M4 LINE L1 4289 4681 -1465 562 108 0 0 chr5 451514 451597 -202633935 - AluSp SINE Alu -12 301 219 1098 126 13 0 chr5 451599 451750 -202633782 - AluSp SINE Alu -160 153 1 412 303 7 0 chr5 451756 451901 -202633631 + L1M4 LINE L1 4687 4832 -1314 326 279 12 0 chr5 451896 451982 -202633550 - L1M4 LINE L1 -2780 3366 3280 * 281 314 12 0 chr5 451986 452072 -202633460 - L1M4 LINE L1 -2780 3366 3280 331 279 12 0 chr5 452076 452162 -202633370 - L1M4 LINE L1 -2780 3366 3280 247 325 12 0 chr5 452166 452249 -202633283 - L1M4 LINE L1 -2780 3366 3283 304 322 0 0 chr5 452256 452343 -202633189 - L1M4 LINE L1 -2780 3366 3280 236 349 12 0 chr5 452347 452433 -202633099 - L1M4 LINE L1 -2780 3366 3280 321 360 0 0 chr5 452437 452562 -202632970 - L1M4 LINE L1 -2780 3366 3242 310 235 29 11 chr5 453050 453134 -202632398 - MER69 DNA AcHobo 0 2526 2445 2413 106 0 0 chr5 453134 453437 -202632095 + AluSc SINE Alu 4 306 -3 310 235 29 11 chr5 453437 453469 -202632063 - MER69 DNA AcHobo -81 2445 61 612 169 0 0 chr5 453552 453682 -202631850 + (CA)n Simple_repeat Simple_repeat 2 131 0 22 0 0 0 chr5 455894 455916 -202629616 + AT_rich Low_complexity Low_complexity 1 22 0 279 338 7 7 chr5 455936 456075 -202629457 + (CA)n Simple_repeat Simple_repeat 2 140 0 1826 256 109 77 chr5 457181 457669 -202627863 - L1MEc LINE L1 -2665 3875 3404 2236 110 7 0 chr5 457669 457959 -202627573 - AluSx SINE Alu -13 299 8 1826 256 109 77 chr5 457959 458644 -202626888 - L1MEc LINE L1 -3136 3404 2664 1075 260 82 42 chr5 458684 459236 -202626296 - L1MEc LINE L1 -4109 2612 2027 2852 3 0 7 chr5 459236 459541 -202625991 - AluYa5 SINE Alu -8 303 1 1075 260 82 42 chr5 459541 459660 -202625872 - L1MEc LINE L1 -4694 2027 1914 2099 222 55 0 chr5 459722 460213 -202625319 + L1MA4A LINE L1 1 518 -6691 547 268 98 5 chr5 460209 460403 -202625129 + L1MA4A LINE L1 1501 1724 -5485 * 3591 172 33 32 chr5 460404 460430 -202625102 + L1MA4A LINE L1 3394 3418 -3947 2364 154 9 37 chr5 460430 460866 -202624666 + MSTB LTR MaLR 1 424 -2 3591 172 33 32 chr5 460866 464005 -202621527 + L1MA4A LINE L1 3418 6634 -731 2305 123 0 0 chr5 464005 464307 -202621225 + AluSx SINE Alu 7 308 -4 3591 172 33 32 chr5 464307 465036 -202620496 + L1MA4A LINE L1 6634 7360 -5 618 309 94 18 chr5 465038 465527 -202620005 - L1MEc LINE L1 -4673 1867 1342 1660 158 42 3 chr5 465531 465841 -202619691 + MER47A DNA MER2_type 2 323 -43 25 51 0 0 chr5 465872 465911 -202619621 + AT_rich Low_complexity Low_complexity 1 39 0 595 321 61 31 chr5 465929 466019 -202619513 - L1MEc LINE L1 -5344 1377 1291 2306 105 7 0 chr5 466019 466315 -202619217 - AluSp SINE Alu -15 298 1 595 321 61 31 chr5 466315 466766 -202618766 - L1MEc LINE L1 -5430 1291 820 286 242 116 0 chr5 466795 466890 -202618642 + L1MEc LINE L1 887 992 -5404 228 279 83 25 chr5 466896 467100 -202618432 - L1MDa LINE L1 -4924 1797 1582 464 305 66 34 chr5 467143 467463 -202618069 - L1MDa LINE L1 -5038 1492 1162 2446 88 0 3 chr5 467508 467813 -202617719 + AluSx SINE Alu 1 304 -8 1827 147 3 49 chr5 467835 468141 -202617391 + AluJb SINE Alu 1 292 -20 189 0 0 0 chr5 468142 468163 -202617369 + (TA)n Simple_repeat Simple_repeat 2 22 0 194 333 118 7 chr5 468251 468404 -202617128 - MIR SINE MIR -60 202 33 247 263 0 91 chr5 469474 469573 -202615959 - MIR SINE MIR -167 95 6 539 241 10 13 chr5 469907 470064 -202615468 - MER63 DNA MER1_type -58 778 3 21 36 0 0 chr5 470120 470148 -202615384 + AT_rich Low_complexity Low_complexity 1 28 0 1637 114 25 65 chr5 472579 472939 -202612593 - MER4A LTR ERV1 0 664 261 570 133 10 10 chr5 472939 473037 -202612495 - MER4A LTR ERV1 -566 98 1 201 119 0 134 chr5 474277 474344 -202611188 + (CCCCCG)n Simple_repeat Simple_repeat 5 62 0 745 86 19 0 chr5 474911 475016 -202610516 - MER30 DNA MER1_type 0 230 124 1190 118 0 15 chr5 475016 475220 -202610312 + L1P5 LINE L1 5289 5489 -662 180 0 0 0 chr5 476756 476776 -202608756 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 220 282 32 65 chr5 476780 476904 -202608628 - L2 LINE L2 -14 3299 3180 312 286 162 11 chr5 476931 477116 -202608416 + MIR SINE MIR 2 214 -48 347 205 0 43 chr5 478406 478591 -202606941 + (CA)n Simple_repeat Simple_repeat 2 178 0 306 251 0 0 chr5 478612 478840 -202606692 + (CA)n Simple_repeat Simple_repeat 1 228 0 204 326 32 21 chr5 478945 479040 -202606492 + L3 LINE CR1 1246 1341 -236 253 178 42 0 chr5 480647 480765 -202604767 + (CA)n Simple_repeat Simple_repeat 2 124 0 958 284 57 3 chr5 481485 481816 -202603716 + MLT1A2 LTR MaLR 26 374 0 2199 138 3 0 chr5 483477 483788 -202601744 + AluSq SINE Alu 1 312 -1 606 193 103 167 chr5 484301 484649 -202600883 - MLT1A2 LTR MaLR -48 326 1 320 262 2 43 chr5 484654 484748 -202600784 + MLT1C LTR MaLR 331 460 -45 535 167 113 20 chr5 484921 485071 -202600461 + ORSL DNA AcHobo 104 267 -8 776 270 138 5 chr5 485486 485878 -202599654 - MLT1C LTR MaLR 0 467 24 209 130 0 43 chr5 486580 486626 -202598906 + (TGGGGG)n Simple_repeat Simple_repeat 4 47 0 214 171 0 0 chr5 486708 486749 -202598783 + CT-rich Low_complexity Low_complexity 2 42 0 286 236 8 57 chr5 487846 487969 -202597563 + (CACG)n Simple_repeat Simple_repeat 1 117 0 223 248 0 60 chr5 489618 489735 -202595797 + (CACCC)n Simple_repeat Simple_repeat 3 112 0 369 282 91 112 chr5 489898 490238 -202595294 - L1ME4a LINE L1 -96 6025 5693 241 297 123 36 chr5 490279 490474 -202595058 - MER58C DNA MER1_type 0 215 4 305 340 77 19 chr5 490474 490630 -202594902 - L1ME4a LINE L1 -481 5640 5476 817 175 35 0 chr5 490887 491058 -202594474 - L1MA4 LINE L1 -8 6292 6116 2144 107 37 10 chr5 491061 491514 -202594018 + AluSx SINE Alu 1 461 0 3760 184 13 5 chr5 491514 492265 -202593267 - L1MA4A LINE L1 -175 6128 5372 458 175 79 21 chr5 492267 492412 -202593120 + L1ME LINE L1 5254 5402 -770 2360 120 0 0 chr5 492441 492749 -202592783 - AluSx SINE Alu -4 308 1 1997 112 10 56 chr5 492936 493240 -202592292 - AluSx SINE Alu -20 292 3 9139 35 7 0 chr5 493623 495543 -202589989 - L1PA5 LINE L1 -5 6149 4222 656 291 103 19 chr5 497570 497790 -202587742 - L1MB7 LINE L1 -73 6111 5875 2395 78 0 7 chr5 497790 498086 -202587446 - AluY SINE Alu -17 294 1 656 291 103 19 chr5 498086 498117 -202587415 - L1MB7 LINE L1 -309 5875 5848 941 156 88 34 chr5 498758 498963 -202586569 + MLT1A1 LTR MaLR 139 354 -11 405 329 43 18 chr5 499006 499170 -202586362 - L1MEd LINE L1 -5030 1089 922 402 269 157 15 chr5 501433 501630 -202583902 + L1ME LINE L1 5586 5810 -311 613 247 110 46 chr5 502314 502738 -202582794 - MLT1D LTR MaLR -10 457 30 292 157 114 0 chr5 505055 505125 -202580407 - MER5A DNA MER1_type -65 124 47 2270 78 3 3 chr5 506358 506664 -202578868 - AluSp SINE Alu -7 306 1 1235 142 43 114 chr5 506674 506999 -202578533 - AluJb SINE Alu 0 302 1 421 235 0 43 chr5 507428 507615 -202577917 + C-rich Low_complexity Low_complexity 2 180 0 778 162 0 0 chr5 510701 510818 -202574714 + FLAM_C SINE Alu 1 117 -16 1179 162 44 0 chr5 511608 511812 -202573720 + AluJb SINE Alu 85 297 -15 503 141 0 0 chr5 512053 512124 -202573408 - FLAM SINE Alu -24 119 49 1924 118 0 4 chr5 512700 512999 -202572533 - AluY SINE Alu 0 310 13 1555 92 14 0 chr5 513002 513219 -202572313 + AluSg/x SINE Alu 90 309 -1 578 277 16 41 chr5 513512 513720 -202571812 - L2 LINE L2 0 3313 3110 1920 144 10 13 chr5 513720 513840 -202571692 + AluJb SINE Alu 1 120 -192 459 0 0 0 chr5 513840 513891 -202571641 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1920 144 10 13 chr5 513891 514083 -202571449 + AluJb SINE Alu 120 312 0 578 277 16 41 chr5 514083 514116 -202571416 - L2 LINE L2 -203 3110 3078 304 111 93 0 chr5 515084 515138 -202570394 - MADE1 DNA Mariner -21 59 1 235 366 35 25 chr5 515232 515434 -202570098 - L2 LINE L2 -199 3073 2870 288 264 33 8 chr5 515464 515585 -202569947 - L2 LINE L2 -339 2974 2851 227 179 54 18 chr5 522351 522407 -202563125 - MLT2D LTR ERVL -128 286 229 235 160 20 20 chr5 523260 523310 -202562222 - MLT2D LTR ERVL -116 298 249 189 0 0 0 chr5 524152 524173 -202561359 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 204 135 0 0 chr5 524952 524989 -202560543 + (TTC)n Simple_repeat Simple_repeat 3 39 0 233 176 0 0 chr5 526894 526945 -202558587 - Alu SINE Alu -4 298 248 276 276 129 64 chr5 527403 527903 -202557629 - L1ME LINE L1 -347 5823 5303 2143 128 0 0 chr5 527914 528226 -202557306 - AluSx SINE Alu 0 312 1 297 302 83 18 chr5 528342 528511 -202557021 - L2 LINE L2 -433 2881 2702 1325 304 53 20 chr5 529171 530155 -202555377 + L1ME1 LINE L1 4976 5994 -172 2810 176 36 2 chr5 530870 531348 -202554184 - LOR1a LTR ERV1 0 497 4 743 239 46 10 chr5 532616 532813 -202552719 - L1MA10 LINE L1 -10 6324 6121 2146 97 10 16 chr5 534182 534493 -202551039 - AluSg SINE Alu -1 309 1 473 240 118 36 chr5 534695 535084 -202550448 + MER77 LTR ERV1 1 503 -102 237 262 0 0 chr5 537327 537388 -202548144 - MER20B DNA MER1_type -242 541 481 565 267 117 114 chr5 537966 538464 -202547068 - L1MEd LINE L1 -4960 1159 661 738 196 0 8 chr5 538518 538651 -202546881 - FLAM_A SINE Alu 0 133 2 580 133 0 10 chr5 539126 539224 -202546308 + MER4A LTR ERV1 2 98 -566 1624 151 9 25 chr5 539224 539575 -202545957 + MER4A LTR ERV1 261 664 0 682 210 36 6 chr5 539824 539991 -202545541 + L1MD1 LINE L1 6071 6242 0 2204 89 7 0 chr5 540342 540659 -202544873 + AluSc SINE Alu 1 319 0 1406 161 103 4 chr5 541659 541932 -202543600 - AluJb SINE Alu -12 300 1 300 301 127 18 chr5 542065 542231 -202543301 - MIR SINE MIR -50 212 29 1359 80 0 0 chr5 542579 542755 -202542777 + AluSc SINE Alu 134 309 0 621 206 0 0 chr5 542888 543014 -202542518 + MLT2B2 LTR ERVL 1 126 -389 844 231 163 10 chr5 594131 594425 -202491107 - MER44D DNA MER2_type 0 609 1 686 173 23 30 chr5 594651 594784 -202490748 - FLAM_C SINE Alu -1 132 1 213 282 59 24 chr5 600459 600544 -202484988 + L2 LINE L2 3183 3270 -2 1604 180 38 11 chr5 604691 605072 -202480460 - MLT1B LTR MaLR 0 396 1 657 238 74 0 chr5 605185 605374 -202480158 - MLT1A1 LTR MaLR -16 349 147 278 311 38 0 chr5 605746 605878 -202479654 - L1MC5 LINE L1 -1130 6831 6695 2237 84 10 0 chr5 608623 608921 -202476611 - AluSp SINE Alu -12 301 1 273 348 73 0 chr5 609145 609323 -202476209 + L1M4 LINE L1 2964 3154 -2992 231 365 0 10 chr5 609875 609979 -202475553 + L1M4 LINE L1 3853 3955 -2191 335 240 69 8 chr5 610298 610513 -202475019 + Charlie5 DNA MER1_type 2341 2624 0 213 358 0 0 chr5 611430 611606 -202473926 + (CAGGT)n Simple_repeat Simple_repeat 3 178 0 336 258 53 13 chr5 612599 612750 -202472782 + Charlie8 DNA MER1_type 76 232 -2185 440 293 47 0 chr5 613222 613372 -202472160 + MER58A DNA MER1_type 40 196 -28 326 353 0 8 chr5 614393 614526 -202471006 + (TG)n Simple_repeat Simple_repeat 1 132 0 208 258 11 11 chr5 614540 614633 -202470899 + (TG)n Simple_repeat Simple_repeat 1 93 0 278 258 12 24 chr5 614677 614844 -202470688 + (TATG)n Simple_repeat Simple_repeat 1 165 0 206 214 0 0 chr5 614851 614893 -202470639 + (TG)n Simple_repeat Simple_repeat 1 42 0 262 309 49 8 chr5 616090 616213 -202469319 - HAL1 LINE L1 -1364 1143 1016 2258 114 0 0 chr5 616973 617281 -202468251 - AluSx SINE Alu -4 308 1 445 171 170 24 chr5 619428 619582 -202465950 - MLT1D LTR MaLR -215 184 22 323 304 40 8 chr5 620765 620890 -202464642 - Looper DNA T2_type -80 1478 1350 775 263 191 3 chr5 621369 621689 -202463843 - Looper DNA T2_type -306 1252 873 788 269 82 31 chr5 621862 622407 -202463125 - Looper DNA T2_type -917 641 29 389 281 178 43 chr5 622718 623116 -202462416 - MLT1C LTR MaLR -12 455 4 666 184 11 10 chr5 630603 630897 -202454635 + (CACCC)n Simple_repeat Simple_repeat 1 294 0 235 229 16 0 chr5 630900 630961 -202454571 + (CCCCAG)n Simple_repeat Simple_repeat 2 63 0 1586 147 73 18 chr5 633958 634244 -202451288 - AluJo SINE Alu -10 302 1 217 269 0 13 chr5 636505 636583 -202448949 + CT-rich Low_complexity Low_complexity 3 79 0 460 191 107 30 chr5 638222 638353 -202447179 + Tigger1 DNA MER2_type 22 162 -2256 801 223 128 0 chr5 638353 638595 -202446937 + Tigger1 DNA MER2_type 115 387 -2031 2150 111 0 13 chr5 643600 643907 -202441625 - AluSx SINE Alu -5 307 5 304 364 6 11 chr5 647489 647665 -202437867 + (TG)n Simple_repeat Simple_repeat 1 175 0 466 260 14 41 chr5 647810 648187 -202437345 + (TG)n Simple_repeat Simple_repeat 1 366 0 339 305 0 68 chr5 648177 648367 -202437165 + (CGTG)n Simple_repeat Simple_repeat 2 178 0 * 491 261 13 22 chr5 648277 648821 -202436711 + (TG)n Simple_repeat Simple_repeat 1 538 0 375 359 0 6 chr5 653577 653758 -202431774 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 392 0 0 chr5 653785 653938 -202431594 + (CA)n Simple_repeat Simple_repeat 2 154 0 219 401 0 6 chr5 654013 654185 -202431347 + (CA)n Simple_repeat Simple_repeat 2 172 0 * 313 302 0 62 chr5 654159 654351 -202431181 + (CATG)n Simple_repeat Simple_repeat 1 180 0 287 280 34 46 chr5 654401 654576 -202430956 + (CATG)n Simple_repeat Simple_repeat 1 173 0 * 332 391 0 0 chr5 654504 654678 -202430854 + (CA)n Simple_repeat Simple_repeat 2 175 0 596 317 12 32 chr5 654679 654928 -202430604 - ERVL LTR ERVL -330 5434 5191 404 350 65 16 chr5 655239 655548 -202429984 - MLT1I LTR MaLR -25 384 61 321 383 52 22 chr5 655620 655850 -202429682 - ERVL LTR ERVL -936 4828 4592 904 297 60 21 chr5 655928 656308 -202429224 - ERVL LTR ERVL -1271 4493 4099 700 294 102 9 chr5 656318 656757 -202428775 + L1MEc LINE L1 1066 1545 -4851 284 182 0 0 chr5 656762 656817 -202428715 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656822 656877 -202428655 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656882 656937 -202428595 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656942 656997 -202428535 + L1MCa LINE L1 1513 1567 -4859 539 306 139 28 chr5 657002 657325 -202428207 + L1MCa LINE L1 1513 1967 -4555 929 245 167 23 chr5 657325 657366 -202428166 + L1MCa LINE L1 2224 2258 -4168 1712 158 25 3 chr5 657366 657651 -202427881 + AluSx SINE Alu 1 291 -21 929 245 167 23 chr5 657651 657932 -202427600 + L1MCa LINE L1 2258 2497 -3929 2082 134 0 6 chr5 657932 658245 -202427287 + AluSx SINE Alu 1 311 -1 929 245 167 23 chr5 658245 658707 -202426825 + L1MCa LINE L1 2497 3092 -3334 231 260 41 14 chr5 658709 658782 -202426750 - MLT1J2 LTR MaLR -304 146 72 2052 147 0 0 chr5 658906 659212 -202426320 + AluSx SINE Alu 1 306 -6 280 224 0 0 chr5 659227 659276 -202426256 + L1ME1 LINE L1 37 85 -6311 1543 268 70 25 chr5 659288 659946 -202425586 + L1ME1 LINE L1 577 1118 -4995 1734 245 63 40 chr5 659953 660631 -202424901 + L1ME1 LINE L1 2454 3147 -3068 1971 259 106 24 chr5 660650 660798 -202424734 + L1ME1 LINE L1 4692 4826 -1409 1424 193 66 39 chr5 660798 661160 -202424372 - MLT1A2 LTR MaLR -2 372 1 1971 259 106 24 chr5 661160 662275 -202423257 + L1ME1 LINE L1 4826 6078 -157 1692 189 0 0 chr5 662275 662556 -202422976 + AluSx SINE Alu 28 308 -4 1971 259 106 24 chr5 662556 662722 -202422810 + L1ME1 LINE L1 6078 6229 -6 1628 256 72 4 chr5 662818 663302 -202422230 - L1M4 LINE L1 -1429 4717 4201 324 341 67 0 chr5 663304 663483 -202422049 - ERVL LTR ERVL -1741 3913 3723 339 307 119 3 chr5 663653 663873 -202421659 - ERVL LTR ERVL -2132 3561 3267 1283 328 34 26 chr5 663913 663965 -202421567 - ERVL LTR ERVL -2532 3232 3182 784 235 10 56 chr5 663965 664161 -202421371 + MER5A DNA MER1_type 1 187 -2 1283 328 34 26 chr5 664161 664721 -202420811 - ERVL LTR ERVL -2582 3182 2615 1450 170 65 0 chr5 665877 666153 -202419379 - AluJb SINE Alu -18 294 1 716 238 105 28 chr5 666422 666708 -202418824 + MLT1A1 LTR MaLR 43 350 -15 216 280 0 0 chr5 666796 666871 -202418661 + G-rich Low_complexity Low_complexity 1 75 0 213 258 11 22 chr5 667839 667928 -202417604 + G-rich Low_complexity Low_complexity 2 89 0 24 32 0 0 chr5 668119 668150 -202417382 + GC_rich Low_complexity Low_complexity 1 31 0 407 248 0 8 chr5 668931 669060 -202416472 + (TG)n Simple_repeat Simple_repeat 1 128 0 1420 168 18 96 chr5 669413 669746 -202415786 + AluJo SINE Alu 3 309 -3 250 333 19 0 chr5 671122 671227 -202414305 - MIR SINE MIR -77 185 79 244 203 20 27 chr5 672328 672484 -202413048 + (TCTA)n Simple_repeat Simple_repeat 1 154 0 1654 167 20 73 chr5 672497 672893 -202412639 - MLT1B LTR MaLR 0 390 16 215 246 36 0 chr5 672902 673012 -202412520 + (TCTA)n Simple_repeat Simple_repeat 3 116 0 * 850 182 10 0 chr5 672994 673288 -202412244 + (TCCA)n Simple_repeat Simple_repeat 1 297 0 186 358 87 10 chr5 673373 673580 -202411952 - MIR SINE MIR -16 246 24 243 0 0 0 chr5 674072 674099 -202411433 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 301 220 33 0 chr5 675921 676071 -202409461 + CT-rich Low_complexity Low_complexity 1 155 0 2261 93 0 3 chr5 676148 676458 -202409074 - AluSc SINE Alu 0 309 1 205 143 53 127 chr5 679359 679548 -202405984 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 193 81 141 20 chr5 679577 679676 -202405856 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 374 103 103 81 chr5 679787 679961 -202405571 + (TGGA)n Simple_repeat Simple_repeat 2 179 0 213 293 48 12 chr5 681753 681920 -202403612 + (CAGCC)n Simple_repeat Simple_repeat 4 176 0 * 240 337 30 0 chr5 681809 682036 -202403496 + (CCCGG)n Simple_repeat Simple_repeat 1 233 0 225 125 25 0 chr5 684942 684982 -202400550 - L1MEc LINE L1 -3162 3053 3013 3055 234 72 10 chr5 685085 686486 -202399046 - L1MEc LINE L1 -3130 3085 1634 4231 171 64 20 chr5 686497 686901 -202398631 - L1MB3 LINE L1 -8 6175 5790 1773 171 3 13 chr5 686901 687205 -202398327 - AluJb SINE Alu -11 301 1 4231 171 64 20 chr5 687205 687956 -202397576 - L1MB3 LINE L1 -393 5790 4962 407 333 15 5 chr5 687956 688157 -202397375 - L1MEc LINE L1 -5519 877 675 1934 99 4 0 chr5 691870 692133 -202393399 + AluSq SINE Alu 36 299 -14 764 117 22 34 chr5 693942 694121 -202391411 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 267 107 76 23 chr5 694176 694307 -202391225 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 225 254 103 40 chr5 700275 700499 -202385033 - MLT1I LTR MaLR -143 266 29 363 248 33 6 chr5 700543 700857 -202384675 + (TG)n Simple_repeat Simple_repeat 1 322 0 769 185 11 0 chr5 701638 701816 -202383716 + (CA)n Simple_repeat Simple_repeat 1 180 0 237 297 89 10 chr5 704087 704188 -202381344 + MIR SINE MIR 41 149 -59 1596 107 9 124 chr5 704271 704609 -202380923 + AluSp SINE Alu 3 301 -12 1245 258 42 11 chr5 705607 705987 -202379545 + L1MB3 LINE L1 5784 6175 -8 241 296 31 0 chr5 706937 707035 -202378497 + MER58A DNA MER1_type 19 119 0 426 204 0 0 chr5 709064 709172 -202376360 + (GGATG)n Simple_repeat Simple_repeat 3 110 0 204 40 0 0 chr5 709693 709718 -202375814 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 170 0 0 chr5 709791 709844 -202375688 + (TG)n Simple_repeat Simple_repeat 2 54 0 272 310 155 0 chr5 712133 712262 -202373270 - MIR SINE MIR -49 213 65 1292 312 91 22 chr5 712923 714095 -202371437 - L1MEc LINE L1 -2919 3507 2296 2184 118 0 0 chr5 714095 714399 -202371133 - AluSx SINE Alu -6 306 3 1292 312 91 22 chr5 714399 714456 -202371076 - L1MEc LINE L1 -4130 2296 2244 381 343 61 25 chr5 714670 714868 -202370664 - L1MEc LINE L1 -4539 1887 1683 1183 58 41 35 chr5 715010 715211 -202370321 - AluY SINE Alu 0 311 119 1138 296 87 16 chr5 715650 716214 -202369318 - L1MEc LINE L1 -5748 859 256 383 299 134 5 chr5 716455 716649 -202368883 - L1MEd LINE L1 -5304 815 597 253 323 161 29 chr5 720095 720479 -202365053 + L2 LINE L2 2362 2796 -518 476 286 20 6 chr5 721502 721702 -202363830 + L1M3 LINE L1 5254 5458 -722 261 304 130 5 chr5 722060 722244 -202363288 + LTR16A1 LTR ERVL 248 454 -3 1030 218 64 123 chr5 722420 722874 -202362658 + MLT1C LTR MaLR 8 434 -33 248 235 59 69 chr5 723231 723333 -202362199 + L2 LINE L2 3172 3272 0 296 231 10 0 chr5 723333 723437 -202362095 + (TGGA)n Simple_repeat Simple_repeat 2 106 0 344 246 8 0 chr5 723473 723595 -202361937 + (TGGA)n Simple_repeat Simple_repeat 2 124 0 226 271 0 0 chr5 723598 723646 -202361886 + polypurine Low_complexity Low_complexity 4 51 0 215 263 0 0 chr5 723619 723676 -202361856 + (TGGG)n Simple_repeat Simple_repeat 3 59 0 * 572 198 12 17 chr5 723684 723856 -202361676 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 189 0 0 0 chr5 723895 723916 -202361616 + (TGGA)n Simple_repeat Simple_repeat 4 24 0 902 164 0 11 chr5 723928 724203 -202361329 + (TGGA)n Simple_repeat Simple_repeat 1 272 0 247 224 17 0 chr5 725477 725535 -202359997 + MER81 DNA DNA 2 60 -54 389 285 137 23 chr5 727764 727955 -202357577 + MIR SINE MIR 11 215 -47 371 291 125 35 chr5 728704 729048 -202356484 + MLT1E LTR MaLR 105 479 -114 1166 134 32 0 chr5 729323 729509 -202356023 - AluSg/x SINE Alu -1 309 118 1828 88 149 0 chr5 729513 729774 -202355758 - AluSx SINE Alu -2 300 1 415 300 9 3 chr5 730553 730888 -202354644 + (TG)n Simple_repeat Simple_repeat 1 337 0 446 316 0 7 chr5 730922 731074 -202354458 + (TG)n Simple_repeat Simple_repeat 1 151 0 1393 226 29 9 chr5 731415 731765 -202353767 - MLT1A1 LTR MaLR -6 359 3 632 202 97 45 chr5 731793 732040 -202353492 + pTR5 LTR ERV1 738 997 -1441 3732 158 67 42 chr5 732134 732805 -202352727 + LTR12 LTR ERV1 1 688 0 674 231 89 41 chr5 733647 733966 -202351566 + L1MC4a LINE L1 6113 6476 -1332 626 193 114 0 chr5 733967 734107 -202351425 - MER45A DNA AcHobo -1 177 22 1317 265 98 55 chr5 734292 734620 -202350912 + L1MC4a LINE L1 6623 6935 -873 1712 178 7 7 chr5 734620 734913 -202350619 + AluJb SINE Alu 1 293 -19 1317 265 98 55 chr5 734913 735350 -202350182 + L1MC4a LINE L1 6935 7421 -387 626 259 40 71 chr5 735384 735681 -202349851 + L1MC4a LINE L1 7518 7805 -3 1772 109 66 0 chr5 735782 736039 -202349493 + AluSx SINE Alu 1 274 -38 669 265 55 0 chr5 736158 736377 -202349155 + MLT1C LTR MaLR 53 283 -184 1093 213 144 56 chr5 736772 737172 -202348360 - MER66A LTR ERV1 0 478 97 1425 192 91 0 chr5 737274 737582 -202347950 - MER66A-int LTR ERV1 -2 6674 6339 525 156 7 4 chr5 737633 737775 -202347757 + MER66B LTR ERV1 290 486 0 281 231 15 0 chr5 737858 737923 -202347609 - MER66A-int LTR ERV1 -287 6389 6324 610 189 0 24 chr5 737998 738125 -202347407 - MER66A-int LTR ERV1 -1852 4824 4701 1709 135 0 105 chr5 738163 738496 -202347036 - AluJb SINE Alu -4 298 1 945 258 70 36 chr5 738499 738637 -202346895 - MER66A-int LTR ERV1 -2509 4167 4035 2227 100 0 3 chr5 738637 738937 -202346595 + AluSg SINE Alu 1 299 -11 945 258 70 36 chr5 738937 739128 -202346404 - MER66A-int LTR ERV1 -2641 4035 3827 1336 74 0 0 chr5 739128 739291 -202346241 + AluSq SINE Alu 1 163 -150 4315 235 53 20 chr5 739318 740066 -202345466 - MER66A-int LTR ERV1 -2863 3813 3091 1569 110 9 9 chr5 740066 740294 -202345238 + AluSc SINE Alu 65 292 -17 4315 235 53 20 chr5 740294 740877 -202344655 - MER66A-int LTR ERV1 -3585 3091 2336 2056 199 59 5 chr5 740866 741539 -202343993 - MER66A-int LTR ERV1 -4508 2168 1424 * 4541 224 81 32 chr5 741986 743279 -202342253 - MER66A-int LTR ERV1 -5268 1408 53 1306 174 92 90 chr5 743399 743778 -202341754 - MER66A LTR ERV1 0 478 99 385 348 139 16 chr5 743926 744472 -202341060 - L1MC4a LINE L1 -1927 5881 5269 2326 90 3 3 chr5 744622 744934 -202340598 - AluSp SINE Alu -1 312 1 5037 209 33 12 chr5 744945 746446 -202339086 - L1MC1 LINE L1 -1 6332 4802 245 270 45 11 chr5 746446 746535 -202338997 + (CCCA)n Simple_repeat Simple_repeat 4 95 0 514 309 40 0 chr5 746553 746728 -202338804 - L1MC1 LINE L1 -1372 4774 4593 339 85 0 0 chr5 746731 746778 -202338754 + (CA)n Simple_repeat Simple_repeat 2 48 0 1813 118 0 0 chr5 746792 747046 -202338486 - AluSx SINE Alu -58 254 1 2190 112 10 0 chr5 747249 747553 -202337979 - AluSg SINE Alu -3 307 1 862 129 8 8 chr5 747553 747685 -202337847 - AluSg SINE Alu -178 132 1 233 301 39 19 chr5 748536 748639 -202336893 - MER20B DNA MER1_type 0 783 679 239 326 28 21 chr5 748798 748939 -202336593 - MER20B DNA MER1_type -385 398 257 2157 101 0 7 chr5 749299 749597 -202335935 - AluSx SINE Alu -16 296 1 1475 272 52 82 chr5 749894 750659 -202334873 - MER21B LTR ERV1 -107 756 15 1969 120 0 4 chr5 750662 750938 -202334594 - AluSx SINE Alu -24 288 14 213 189 33 67 chr5 751006 751096 -202334436 + (CCCCAG)n Simple_repeat Simple_repeat 2 88 0 659 179 132 24 chr5 751798 751881 -202333651 - MER45B DNA AcHobo -562 1019 946 2076 113 14 0 chr5 751881 752173 -202333359 - AluSx SINE Alu -16 296 1 659 179 132 24 chr5 752173 752301 -202333231 - MER45B DNA AcHobo -635 946 785 345 299 46 37 chr5 752744 752961 -202332571 - MER45B DNA AcHobo -247 793 575 380 258 20 0 chr5 753140 753251 -202332281 - MER45 DNA AcHobo -787 166 67 258 322 66 8 chr5 753971 754092 -202331440 + MIR SINE MIR 106 233 -29 1362 184 46 20 chr5 755098 755446 -202330086 + MLT1B LTR MaLR 1 357 -33 3069 164 72 2 chr5 755447 755964 -202329568 + MER41C LTR ERV1 2 554 0 2224 106 0 6 chr5 756587 756898 -202328634 - AluSq SINE Alu -4 309 1 686 331 48 3 chr5 756912 757226 -202328306 + L1ME1 LINE L1 5402 5729 -2079 731 258 116 68 chr5 757268 758336 -202327196 + L1MEc LINE L1 1008 2023 -4192 1905 150 0 26 chr5 758336 758643 -202326889 + AluJb SINE Alu 1 299 -13 2060 116 3 3 chr5 758645 758937 -202326595 + AluSq SINE Alu 1 292 -21 731 258 116 68 chr5 758937 759196 -202326336 + L1MEc LINE L1 2023 2561 -3654 3189 209 129 3 chr5 759277 760137 -202325395 + L1 LINE L1 1 968 -5821 3174 150 8 0 chr5 760135 760743 -202324789 + L1 LINE L1 4950 5562 -1226 * 1671 140 52 4 chr5 760743 761014 -202324518 + AluJo SINE Alu 9 292 -20 484 272 51 24 chr5 761018 761319 -202324213 + L1ME1 LINE L1 5685 6037 -129 1892 145 10 3 chr5 761319 761615 -202323917 - AluJb SINE Alu -14 298 1 484 272 51 24 chr5 761615 761749 -202323783 + L1ME1 LINE L1 6037 6166 0 2528 157 52 7 chr5 761923 762349 -202323183 - MER65A LTR ERV1 0 445 1 3676 140 28 25 chr5 762498 762693 -202322839 + MER50 LTR ERV1 24 217 -517 1660 54 45 18 chr5 762693 762915 -202322617 + L1PA6 LINE L1 5922 6149 -5 3676 140 28 25 chr5 762915 763405 -202322127 + MER50 LTR ERV1 217 711 -23 2388 58 0 0 chr5 764214 764505 -202321027 + AluY SINE Alu 2 292 -19 22 56 0 0 chr5 767394 767430 -202318102 + GC_rich Low_complexity Low_complexity 1 36 0 43 64 0 0 chr5 767561 767639 -202317893 + GC_rich Low_complexity Low_complexity 1 78 0 24 0 0 0 chr5 767809 767833 -202317699 + GC_rich Low_complexity Low_complexity 1 24 0 2182 95 3 0 chr5 769276 769570 -202315962 - AluSg SINE Alu -15 295 1 1761 149 14 10 chr5 769592 769881 -202315651 + AluJb SINE Alu 1 290 -22 279 0 0 0 chr5 770443 770474 -202315058 + (CA)n Simple_repeat Simple_repeat 1 31 0 1980 103 59 10 chr5 771417 771707 -202313825 + AluSx SINE Alu 1 304 -8 2012 126 0 7 chr5 777686 778013 -202307519 - AluSx SINE Alu 0 312 1 844 231 163 10 chr5 779765 780059 -202305473 - MER44D DNA MER2_type 0 609 1 686 173 23 30 chr5 780285 780418 -202305114 - FLAM_C SINE Alu -1 132 1 233 204 20 0 chr5 790506 790555 -202294977 - Tigger3(Golem) DNA MER2_type -2979 50 1 198 240 40 0 chr5 793050 793100 -202292432 + MER5A DNA MER1_type 47 98 -91 559 211 48 53 chr5 997199 997407 -202088125 + Charlie5 DNA MER1_type 2333 2539 -73 212 241 0 60 chr5 999964 1000047 -202085485 + C-rich Low_complexity Low_complexity 6 83 0 306 255 0 21 chr5 1000288 1000382 -202085150 + C-rich Low_complexity Low_complexity 2 93 0 455 94 118 47 chr5 1001084 1001169 -202084363 + AluJo SINE Alu 85 175 -137 2041 107 4 0 chr5 1002836 1003106 -202082426 + AluSx SINE Alu 1 271 -41 344 203 0 16 chr5 1003217 1003281 -202082251 + L2 LINE L2 3251 3313 0 395 247 62 0 chr5 1003299 1003396 -202082136 + Zaphod DNA AcHobo 500 602 -3429 201 264 190 33 chr5 1004454 1004575 -202080957 + L2 LINE L2 3128 3267 -46 635 163 0 36 chr5 1005262 1005428 -202080104 + (CCCTAA)n Simple_repeat Simple_repeat 6 165 0 388 143 0 33 chr5 1005439 1005530 -202080002 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 207 0 0 0 chr5 1005718 1005741 -202079791 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2817 116 7 9 chr5 1005741 1006172 -202079360 - L1PB1 LINE L1 -11 6140 5711 1701 152 0 0 chr5 1007187 1007437 -202078095 - AluSx SINE Alu -62 250 1 2195 120 3 3 chr5 1007806 1008107 -202077425 - AluSg SINE Alu -9 301 1 32 26 0 0 chr5 1008116 1008155 -202077377 + AT_rich Low_complexity Low_complexity 1 39 0 2321 104 0 0 chr5 1009952 1010259 -202075273 - AluSg SINE Alu -3 307 1 222 235 59 0 chr5 1012715 1012783 -202072749 + MIR3 SINE MIR 116 187 -21 213 246 31 0 chr5 1013266 1013331 -202072201 + (TG)n Simple_repeat Simple_repeat 1 67 0 216 277 0 15 chr5 1013457 1013522 -202072010 + T-rich Low_complexity Low_complexity 2 65 0 269 262 8 41 chr5 1013922 1014044 -202071488 + (CGGGG)n Simple_repeat Simple_repeat 1 118 0 269 294 198 6 chr5 1016091 1016268 -202069264 - MLT1J2 LTR MaLR -51 399 189 420 337 118 3 chr5 1017761 1018117 -202067415 + HAL1 LINE L1 255 651 -1856 1308 213 97 19 chr5 1018224 1018716 -202066816 + MER74A LTR ERVL 1 558 0 303 221 18 71 chr5 1018863 1018976 -202066556 - L1MC5 LINE L1 -402 7559 7453 1411 195 94 6 chr5 1019009 1019514 -202066018 + L1MB7 LINE L1 5459 6164 -20 918 287 120 11 chr5 1019519 1019968 -202065564 + HAL1 LINE L1 1291 1788 -719 187 250 16 47 chr5 1020089 1020153 -202065379 - L3 LINE CR1 -772 805 744 5371 135 6 26 chr5 1021487 1021987 -202063545 + L1PA14 LINE L1 4877 5385 -776 2289 123 0 0 chr5 1021987 1022295 -202063237 + AluY SINE Alu 1 308 -3 5371 135 6 26 chr5 1022295 1022515 -202063017 + L1PA14 LINE L1 5385 5608 -553 8600 52 20 1 chr5 1022515 1023564 -202061968 - MER11C LTR ERVK -2 1069 1 5371 135 6 26 chr5 1023564 1024123 -202061409 + L1PA14 LINE L1 5608 6133 -28 867 204 23 27 chr5 1024225 1024445 -202061087 + L1MC3 LINE L1 7077 7295 -490 1267 163 91 77 chr5 1024454 1024829 -202060703 + L1MC3 LINE L1 7403 7782 -3 606 131 0 10 chr5 1025701 1025800 -202059732 + MER4A LTR ERV1 1 98 -566 1673 147 9 13 chr5 1025800 1026147 -202059385 + MER4A LTR ERV1 261 664 0 35 41 0 0 chr5 1026649 1026698 -202058834 + AT_rich Low_complexity Low_complexity 1 49 0 194 220 85 0 chr5 1028838 1028897 -202056635 - L2 LINE L2 -71 3201 3138 9474 42 0 2 chr5 1029473 1031420 -202054112 + L1PA5 LINE L1 4207 6154 0 229 269 65 21 chr5 1032274 1032367 -202053165 - HAL1 LINE L1 -1605 902 806 609 124 0 0 chr5 1035077 1035174 -202050358 + (TG)n Simple_repeat Simple_repeat 2 98 0 26 30 0 0 chr5 1035961 1035994 -202049538 + AT_rich Low_complexity Low_complexity 1 33 0 185 270 27 40 chr5 1036085 1036159 -202049373 - MIR3 SINE MIR -52 156 84 673 250 41 37 chr5 1036868 1037112 -202048420 - L1MC2 LINE L1 -181 6163 5919 1831 184 90 3 chr5 1037164 1037870 -202047662 - L1MC/D LINE L1 -750 5396 4791 216 321 114 15 chr5 1038975 1039106 -202046426 - MIR SINE MIR -83 179 36 2347 87 3 3 chr5 1039722 1040022 -202045510 - AluSp SINE Alu -13 300 1 6905 61 13 14 chr5 1040504 1041797 -202043735 - L1PA7 LINE L1 -2 6152 4854 267 265 10 0 chr5 1041909 1042007 -202043525 + L1ME1 LINE L1 6060 6158 -8 328 297 42 36 chr5 1042480 1042645 -202042887 - MLT1K LTR MaLR -24 564 399 3673 170 40 77 chr5 1043342 1044000 -202041532 - L1MA7 LINE L1 -5 6286 5610 327 109 0 47 chr5 1044000 1044064 -202041468 - Alu SINE Alu -2 300 240 3673 170 40 77 chr5 1044064 1044325 -202041207 - L1MA7 LINE L1 -681 5610 5341 1940 227 13 13 chr5 1044324 1044774 -202040758 + L1 LINE L1 3805 4254 -1892 * 2692 86 0 3 chr5 1044774 1045136 -202040396 - THE1C LTR MaLR 0 375 15 10538 101 70 3 chr5 1045136 1046617 -202038915 - THE1C-int LTR MaLR 0 1580 1 1681 63 5 5 chr5 1046617 1046840 -202038692 - THE1C LTR MaLR 0 375 153 348 132 0 0 chr5 1046842 1046895 -202038637 + Alu SINE Alu 1 53 -248 1042 79 0 0 chr5 1046897 1047048 -202038484 + AluSg/x SINE Alu 159 309 0 1093 102 25 0 chr5 1047048 1047205 -202038327 - THE1C LTR MaLR -214 161 1 3345 176 40 22 chr5 1047206 1047975 -202037557 + L1 LINE L1 4251 5033 -1113 611 76 0 0 chr5 1047975 1048054 -202037478 + MER30B DNA MER1_type 2 80 -110 877 132 0 0 chr5 1048054 1048168 -202037364 + AluSg SINE Alu 1 114 -196 39072 69 10 8 chr5 1048176 1054309 -202031223 + L1PA6 LINE L1 8 6147 -7 1437 104 5 0 chr5 1054309 1054501 -202031031 + AluSg SINE Alu 103 295 -15 396 0 0 0 chr5 1054502 1054546 -202030986 + (CA)n Simple_repeat Simple_repeat 2 45 0 824 119 60 8 chr5 1054548 1054682 -202030850 + MER30B DNA MER1_type 90 230 0 1048 210 27 57 chr5 1054682 1055015 -202030517 + L1 LINE L1 5027 5349 -797 214 222 14 14 chr5 1055156 1055228 -202030304 + (TA)n Simple_repeat Simple_repeat 2 73 0 690 205 0 0 chr5 1056272 1056399 -202029133 - MSTC LTR MaLR -80 348 222 310 394 8 0 chr5 1057298 1057425 -202028107 - L2 LINE L2 -1 3271 3144 391 306 51 2 chr5 1057823 1058024 -202027508 - L1M4b LINE L1 -6395 460 11 1661 178 3 18 chr5 1059749 1060035 -202025497 - AluJo SINE Alu -30 282 1 805 218 35 44 chr5 1060055 1060284 -202025248 - AluJo SINE Alu -1 311 85 579 233 62 11 chr5 1060284 1060460 -202025072 - AluJb SINE Alu -62 250 66 4619 151 14 1 chr5 1060818 1061587 -202023945 + Tigger1 DNA MER2_type 75 853 -1565 1089 142 21 16 chr5 1065495 1065685 -202019847 + L1PB4 LINE L1 5958 6148 -8 6789 134 36 8 chr5 1070391 1071588 -202013944 + Tigger1 DNA MER2_type 971 2201 -217 3835 171 28 52 chr5 1071895 1072812 -202012720 - L1MC1 LINE L1 0 6333 5439 1793 129 0 80 chr5 1073466 1073624 -202011908 + AluSx SINE Alu 1 121 -191 2583 82 0 9 chr5 1073624 1073940 -202011592 + AluSp SINE Alu 1 313 0 1793 129 0 80 chr5 1073940 1074107 -202011425 + AluSx SINE Alu 121 300 -12 341 187 40 0 chr5 1074141 1074216 -202011316 + AluJ/FLAM SINE Alu 11 88 -214 2037 119 3 52 chr5 1074398 1074726 -202010806 - AluSx SINE Alu 0 312 1 1018 106 0 28 chr5 1074731 1074873 -202010659 - FRAM SINE Alu -15 161 24 1286 119 0 11 chr5 1075025 1075210 -202010322 - AluSg/x SINE Alu -9 301 119 1032 117 37 19 chr5 1075212 1075374 -202010158 - AluSg/x SINE Alu -23 289 125 306 287 57 38 chr5 1075397 1075554 -202009978 + L1MCa LINE L1 1906 2065 -4361 206 162 0 147 chr5 1078522 1078590 -202006942 + MIR SINE MIR 161 218 -44 663 248 221 34 chr5 1078674 1079171 -202006361 - MLT1G LTR MaLR 0 590 1 1996 120 39 0 chr5 1079335 1079618 -202005914 + AluSx SINE Alu 1 294 -18 581 235 6 0 chr5 1079879 1080058 -202005474 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 267 152 0 0 chr5 1080081 1080127 -202005405 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 2332 98 0 3 chr5 1080130 1080427 -202005105 - AluSx SINE Alu -16 296 1 2056 96 0 14 chr5 1080481 1080761 -202004771 - AluSx SINE Alu -11 301 26 1278 175 62 15 chr5 1082789 1083094 -202002438 - AluSx SINE Alu 0 329 12 575 125 0 153 chr5 1086944 1087088 -201998444 - AluJb SINE Alu -189 123 2 1833 122 15 4 chr5 1087508 1087779 -201997753 - AluSx SINE Alu 0 312 39 1712 170 30 36 chr5 1089798 1090243 -201995289 + L1M4 LINE L1 5333 5775 -403 244 232 110 0 chr5 1090286 1090368 -201995164 - MIR SINE MIR -1 261 171 285 231 51 13 chr5 1090580 1090658 -201994874 - MLT1E3 LTR MaLR -293 237 157 597 101 4 22 chr5 1092520 1092611 -201992921 + AluSg/x SINE Alu 197 285 -25 199 0 0 0 chr5 1092611 1092633 -201992899 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1978 148 0 10 chr5 1092642 1092952 -201992580 + AluSx SINE Alu 4 310 -2 271 250 16 0 chr5 1093129 1093193 -201992339 - Alu SINE Alu -22 279 215 23 0 0 0 chr5 1093937 1093960 -201991572 + GC_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 1094482 1094525 -201991007 + (GAA)n Simple_repeat Simple_repeat 2 44 0 214 192 0 19 chr5 1098924 1098976 -201986556 + A-rich Low_complexity Low_complexity 3 53 0 255 310 18 9 chr5 1099273 1099386 -201986146 + GA-rich Low_complexity Low_complexity 3 116 0 508 190 100 0 chr5 1099556 1099656 -201985876 - MLT1E3 LTR MaLR -472 152 43 1312 203 132 33 chr5 1099656 1100095 -201985437 - MER66A LTR ERV1 0 478 97 1427 151 63 4 chr5 1100174 1100445 -201985087 - MER66A-int LTR ERV1 0 6676 6390 * 1727 128 48 93 chr5 1100439 1100836 -201984696 - MER66-int LTR ERV1 -1740 4936 4558 507 226 0 19 chr5 1100837 1100943 -201984589 - MER4D LTR ERV1 -712 160 57 547 99 165 8 chr5 1100955 1101076 -201984456 - MER66-int LTR ERV1 -2230 4446 4307 295 175 16 63 chr5 1103943 1104132 -201981400 + G-rich Low_complexity Low_complexity 1 180 0 185 50 0 100 chr5 1104369 1104409 -201981123 + (CCCCCA)n Simple_repeat Simple_repeat 3 38 0 250 69 0 128 chr5 1104456 1104558 -201980974 + (CCCCCA)n Simple_repeat Simple_repeat 4 92 0 368 274 152 19 chr5 1104660 1104970 -201980562 - MLT1C LTR MaLR -72 395 45 189 0 0 0 chr5 1105052 1105073 -201980459 + (T)n Simple_repeat Simple_repeat 1 21 0 266 238 33 26 chr5 1105706 1105857 -201979675 + (CA)n Simple_repeat Simple_repeat 1 152 0 319 257 47 0 chr5 1105892 1106063 -201979469 + (CA)n Simple_repeat Simple_repeat 1 179 0 885 101 0 25 chr5 1107290 1107409 -201978123 - AluJb SINE Alu -19 293 178 701 83 19 0 chr5 1107428 1107536 -201977996 - HY1 scRNA scRNA -1 111 2 1436 159 13 4 chr5 1108766 1108998 -201976534 - AluJo SINE Alu -78 234 1 281 398 0 0 chr5 1109360 1109531 -201976001 + C-rich Low_complexity Low_complexity 3 173 0 * 357 255 11 69 chr5 1109432 1109620 -201975912 + CT-rich Low_complexity Low_complexity 2 178 0 306 346 0 13 chr5 1109546 1109705 -201975827 + C-rich Low_complexity Low_complexity 2 158 0 * 271 310 3 57 chr5 1109895 1110150 -201975382 + C-rich Low_complexity Low_complexity 1 241 0 7206 197 31 18 chr5 1111026 1112608 -201972924 + L1MB3 LINE L1 3581 5214 -969 1917 176 7 0 chr5 1112608 1112903 -201972629 + AluJo SINE Alu 4 300 -12 7206 197 31 18 chr5 1112903 1113847 -201971685 + L1MB3 LINE L1 5214 6144 -39 2925 207 165 0 chr5 1113861 1114669 -201970863 + L1ME1 LINE L1 5222 6161 -5 1753 269 115 28 chr5 1115193 1115543 -201969989 - L1ME LINE L1 -4594 1486 1168 1680 215 0 0 chr5 1115543 1115855 -201969677 - AluJo SINE Alu 0 312 1 1753 269 115 28 chr5 1115855 1116061 -201969471 - L1ME LINE L1 -4912 1168 981 1759 130 90 31 chr5 1116061 1116415 -201969117 + THE1C LTR MaLR 1 375 0 1753 269 115 28 chr5 1116415 1116981 -201968551 - L1ME LINE L1 -5099 981 282 1704 187 3 16 chr5 1117018 1117334 -201968198 - AluJb SINE Alu 0 312 1 2268 110 0 7 chr5 1117348 1117648 -201967884 - AluSc SINE Alu -11 298 1 234 250 31 0 chr5 1117840 1117904 -201967628 - L1ME LINE L1 -5957 113 48 183 100 0 0 chr5 1117966 1117996 -201967536 + (T)n Simple_repeat Simple_repeat 1 30 0 237 239 30 0 chr5 1120599 1120666 -201964866 - LTR23 LTR ERV1 -16 421 353 416 191 76 168 chr5 1120721 1121078 -201964454 - LTR56 LTR ERV1 -121 324 1 200 204 34 34 chr5 1121491 1121579 -201963953 + CT-rich Low_complexity Low_complexity 1 88 0 1423 146 56 0 chr5 1121714 1121982 -201963550 + AluJb SINE Alu 30 312 0 2299 89 3 7 chr5 1121985 1122289 -201963243 + AluSp SINE Alu 1 303 -10 607 322 25 32 chr5 1122760 1123074 -201962458 - L3 LINE CR1 -863 714 403 2838 119 106 12 chr5 1123159 1123722 -201961810 + MER4B LTR ERV1 1 779 0 604 170 0 0 chr5 1123925 1124019 -201961513 + AluJ/FLAM SINE Alu 2 95 -217 342 265 189 0 chr5 1124296 1124428 -201961104 - MIR SINE MIR -56 206 50 2303 73 59 0 chr5 1124532 1124820 -201960712 + AluY SINE Alu 1 305 -6 245 159 23 0 chr5 1125460 1125504 -201960028 + L2 LINE L2 3269 3313 0 341 261 34 0 chr5 1125955 1126043 -201959489 + MER3 DNA MER1_type 1 91 -118 274 171 114 0 chr5 1126887 1126957 -201958575 + MER5A DNA MER1_type 47 124 -65 204 175 88 114 chr5 1127023 1127137 -201958395 + MER5A DNA MER1_type 77 187 -2 1637 91 14 5 chr5 1127164 1127374 -201958158 - AluSq SINE Alu -17 296 85 402 284 56 10 chr5 1127378 1127575 -201957957 - L1MC5 LINE L1 -796 7165 6960 230 208 21 0 chr5 1127626 1127674 -201957858 - L1MC3 LINE L1 -1049 6736 6688 2317 98 7 0 chr5 1127777 1128072 -201957460 - AluSq SINE Alu -16 297 1 822 245 94 87 chr5 1128932 1129368 -201956164 - L1MC3 LINE L1 -1958 5850 5412 467 267 76 9 chr5 1129399 1129629 -201955903 - L1MD2 LINE L1 -108 6058 5802 1991 159 0 0 chr5 1129766 1130062 -201955470 + AluJb SINE Alu 9 304 -8 600 88 0 0 chr5 1130128 1130208 -201955324 - MADE1 DNA Mariner 0 80 1 1590 120 9 19 chr5 1130332 1130593 -201954939 - MER1B DNA MER1_type -2 337 119 229 65 0 0 chr5 1130613 1130644 -201954888 - MER1B DNA MER1_type -174 123 133 248 108 0 0 chr5 1130671 1130708 -201954824 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1130799 1130836 -201954696 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1130831 1130868 -201954664 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1131151 1131188 -201954344 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1131183 1131220 -201954312 - MER1B DNA MER1_type -168 129 133 * 231 132 0 0 chr5 1131440 1131478 -201954054 - MER1B DNA MER1_type -168 129 132 254 105 0 0 chr5 1131536 1131574 -201953958 - MER1B DNA MER1_type -168 129 132 248 108 0 0 chr5 1131600 1131637 -201953895 - MER1B DNA MER1_type -168 129 133 * 249 108 0 0 chr5 1131632 1131669 -201953863 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1131792 1131829 -201953703 - MER1B DNA MER1_type -168 129 133 225 135 0 0 chr5 1131824 1131861 -201953671 - MER1B DNA MER1_type -168 129 133 * 239 130 6 0 chr5 1131856 1131906 -201953626 - MER1B DNA MER1_type -168 129 119 226 135 0 0 chr5 1132018 1132055 -201953477 - MER1B DNA MER1_type -168 129 133 225 135 0 0 chr5 1132114 1132151 -201953381 - MER1B DNA MER1_type -168 129 133 227 83 28 0 chr5 1132242 1132278 -201953254 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1132273 1132310 -201953222 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132305 1132342 -201953190 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132337 1132374 -201953158 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132369 1132406 -201953126 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1132465 1132502 -201953030 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1132497 1132534 -201952998 - MER1B DNA MER1_type -168 129 133 * 239 130 6 0 chr5 1132529 1132579 -201952953 - MER1B DNA MER1_type -168 129 119 228 91 0 0 chr5 1132598 1132631 -201952901 - MER1B DNA MER1_type -173 124 132 231 132 0 0 chr5 1132657 1132695 -201952837 - MER1B DNA MER1_type -168 129 132 225 132 0 0 chr5 1132689 1132727 -201952805 - MER1B DNA MER1_type -168 129 132 * 231 132 0 0 chr5 1132785 1132823 -201952709 - MER1B DNA MER1_type -168 129 132 242 62 0 0 chr5 1132950 1132982 -201952550 - MER1B DNA MER1_type -173 124 133 * 248 108 0 0 chr5 1132977 1133014 -201952518 - MER1B DNA MER1_type -168 129 133 229 132 0 0 chr5 1133009 1133047 -201952485 - MER1B DNA MER1_type -168 129 132 * 226 135 0 0 chr5 1133073 1133110 -201952422 - MER1B DNA MER1_type -168 129 133 * 242 108 0 0 chr5 1133105 1133142 -201952390 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1133137 1133174 -201952358 - MER1B DNA MER1_type -168 129 133 228 91 0 0 chr5 1133206 1133239 -201952293 - MER1B DNA MER1_type -173 124 132 239 130 6 0 chr5 1133265 1133315 -201952217 - MER1B DNA MER1_type -168 129 119 228 91 0 0 chr5 1133302 1133335 -201952197 - MER1B DNA MER1_type -173 124 132 * 248 108 0 0 chr5 1133361 1133398 -201952134 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1133453 1133490 -201952042 - MER1B DNA MER1_type -168 129 133 281 81 0 0 chr5 1133547 1133584 -201951948 - MER1B DNA MER1_type -168 129 133 228 118 0 0 chr5 1134485 1134519 -201951013 - MER1B DNA MER1_type -171 126 133 225 135 0 0 chr5 1134514 1134551 -201950981 - MER1B DNA MER1_type -168 129 133 * 737 178 89 13 chr5 1134607 1134764 -201950768 - MER1B DNA MER1_type -168 129 1 1505 144 137 39 chr5 1134886 1135170 -201950362 + AluJo SINE Alu 1 312 0 1140 171 83 0 chr5 1135886 1136103 -201949429 + MER46A DNA MER2_type 2 236 0 1435 178 103 11 chr5 1136251 1136532 -201949000 + AluJb SINE Alu 1 307 -5 276 233 14 40 chr5 1137761 1138055 -201947477 + CT-rich Low_complexity Low_complexity 1 286 0 230 294 12 12 chr5 1139927 1140012 -201945520 - L1ME LINE L1 -199 5922 5838 4649 193 32 67 chr5 1141438 1143130 -201942402 - L1MB3 LINE L1 -17 6100 4351 429 20 0 0 chr5 1143130 1143180 -201942352 + (TA)n Simple_repeat Simple_repeat 2 51 0 2125 101 3 3 chr5 1143180 1143478 -201942054 - AluY SINE Alu -13 298 1 4649 193 32 67 chr5 1143478 1143653 -201941879 - L1MB3 LINE L1 -1765 4352 4306 2374 76 0 0 chr5 1143653 1143956 -201941576 - AluY SINE Alu -8 303 1 4649 193 32 67 chr5 1143956 1144070 -201941462 - L1MB3 LINE L1 -1811 4306 4190 2095 137 0 0 chr5 1144072 1144378 -201941154 - AluSx SINE Alu -4 308 3 5831 75 19 82 chr5 1144386 1144741 -201940791 - L1PB1 LINE L1 0 6151 5775 505 42 32 21 chr5 1144741 1144836 -201940696 + (TA)n Simple_repeat Simple_repeat 2 97 0 5831 75 19 82 chr5 1144836 1144921 -201940611 - L1PB1 LINE L1 -376 5775 5686 240 35 0 0 chr5 1144921 1144950 -201940582 + (TG)n Simple_repeat Simple_repeat 2 30 0 5831 75 19 82 chr5 1144950 1145467 -201940065 - L1PB1 LINE L1 -465 5686 5254 4911 222 7 3 chr5 1145462 1146581 -201938951 + L1PB1 LINE L1 4144 5267 -879 * 1796 181 21 21 chr5 1146567 1146942 -201938590 - L1MB3 LINE L1 -1879 4201 3827 * 6396 58 5 11 chr5 1146942 1147749 -201937783 + L1PA6 LINE L1 5350 6154 0 325 253 65 84 chr5 1148453 1148607 -201936925 - L1ME LINE L1 -2384 5424 5274 198 71 0 0 chr5 1148774 1148802 -201936730 + (TC)n Simple_repeat Simple_repeat 2 29 0 4954 158 56 8 chr5 1149202 1150064 -201935468 - MER4D LTR ERV1 0 903 1 11028 180 84 37 chr5 1150086 1150397 -201935135 + L1M4c LINE L1 14 309 -6073 4742 123 47 5 chr5 1150397 1151145 -201934387 + MER4E LTR ERV1 1 779 0 11028 180 84 37 chr5 1151145 1151483 -201934049 + L1M4c LINE L1 309 630 -5752 360 0 0 0 chr5 1151483 1151523 -201934009 + (TAA)n Simple_repeat Simple_repeat 3 42 0 11028 180 84 37 chr5 1151523 1151546 -201933986 + L1M4c LINE L1 630 650 -5732 3257 147 20 61 chr5 1151546 1152184 -201933348 + LTR9 LTR ERV1 1 612 0 11028 180 84 37 chr5 1152184 1153728 -201931804 + L1M4c LINE L1 650 2120 -4262 2025 99 25 0 chr5 1153728 1154012 -201931520 - AluSx SINE Alu -21 291 1 11028 180 84 37 chr5 1154012 1155511 -201930021 + L1M4c LINE L1 2120 3916 -2466 1617 253 144 43 chr5 1155504 1156141 -201929391 - L1MB3 LINE L1 -3215 2865 2294 * 1938 114 4 4 chr5 1156141 1156459 -201929073 + AluSx SINE Alu 1 318 0 1617 253 144 43 chr5 1156459 1157593 -201927939 - L1MB3 LINE L1 -3786 2294 829 2444 59 0 3 chr5 1157593 1157896 -201927636 - AluY SINE Alu -9 302 1 1617 253 144 43 chr5 1157896 1158052 -201927480 - L1MB3 LINE L1 -5251 829 690 1288 184 10 37 chr5 1158605 1158899 -201926633 - AluJo SINE Alu -26 286 1 889 77 77 8 chr5 1159426 1159556 -201925976 + MER85 DNA T2_type 1 139 0 226 205 222 8 chr5 1159584 1159701 -201925831 - L1 LINE L1 -3316 2830 2689 1983 121 0 29 chr5 1159701 1160008 -201925524 + AluJb SINE Alu 1 298 -14 962 128 27 0 chr5 1160131 1160280 -201925252 + Tigger1 DNA MER2_type 1516 1668 -750 316 160 120 0 chr5 1160280 1160355 -201925177 + L1MEc LINE L1 2008 2091 -4305 276 296 103 25 chr5 1160568 1160811 -201924721 - L1 LINE L1 -3598 2548 2287 2087 112 7 0 chr5 1160995 1161290 -201924242 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 1161475 1161496 -201924036 + AT_rich Low_complexity Low_complexity 1 21 0 14843 133 36 11 chr5 1162347 1164142 -201921390 + Tigger1 DNA MER2_type 1 1871 -547 1850 108 4 0 chr5 1164142 1164400 -201921132 + AluSx SINE Alu 39 297 -15 14843 133 36 11 chr5 1164400 1164963 -201920569 + Tigger1 DNA MER2_type 1871 2418 0 269 299 46 17 chr5 1168179 1168353 -201917179 + (TG)n Simple_repeat Simple_repeat 2 180 0 342 210 10 115 chr5 1168417 1168617 -201916915 + (TG)n Simple_repeat Simple_repeat 2 180 0 289 228 21 98 chr5 1168771 1168964 -201916568 + (TG)n Simple_repeat Simple_repeat 2 179 0 1665 112 4 27 chr5 1169441 1169701 -201915831 - AluSg SINE Alu -5 305 52 2130 141 52 12 chr5 1174868 1175271 -201910261 + L1MA4 LINE L1 5871 6289 -11 1143 187 82 12 chr5 1176100 1176322 -201909210 - MSTA LTR MaLR 0 428 189 1259 135 0 42 chr5 1176322 1176537 -201908995 + MER75 DNA T2_type 3 208 -306 198 247 161 25 chr5 1176574 1176655 -201908877 - MIR SINE MIR -3 259 168 5138 214 42 40 chr5 1179037 1179967 -201905565 + L1MB5 LINE L1 3731 4658 -1488 387 0 0 0 chr5 1179967 1180010 -201905522 + (TA)n Simple_repeat Simple_repeat 1 43 0 2136 102 0 3 chr5 1180013 1180306 -201905226 - AluSg SINE Alu -18 292 1 5138 214 42 40 chr5 1180306 1180419 -201905113 + L1MB5 LINE L1 4659 4770 -1376 2081 86 20 3 chr5 1180419 1180532 -201905000 + AluSc SINE Alu 11 121 -188 387 0 0 0 chr5 1180532 1180575 -201904957 + (CA)n Simple_repeat Simple_repeat 2 44 0 2081 86 20 3 chr5 1180575 1180753 -201904779 + AluSc SINE Alu 121 307 -2 5138 214 42 40 chr5 1180753 1181115 -201904417 + L1MB5 LINE L1 4770 5144 -1002 2596 218 36 14 chr5 1181151 1181784 -201903748 + L1MB5 LINE L1 5418 6064 -110 832 164 0 0 chr5 1182112 1182252 -201903280 + L1MB5 LINE L1 6023 6162 -12 219 250 26 53 chr5 1182879 1182955 -201902577 - MIR SINE MIR 0 262 189 199 204 19 19 chr5 1184308 1184362 -201901170 - MIR SINE MIR -130 132 79 258 279 154 44 chr5 1185011 1185147 -201900385 + MIR SINE MIR 36 186 -76 347 297 35 0 chr5 1186620 1186765 -201898767 + C-rich Low_complexity Low_complexity 5 154 0 214 297 16 16 chr5 1188624 1188688 -201896844 - L2 LINE L2 -84 3188 3125 267 314 26 33 chr5 1189370 1189523 -201896009 + LTR67 LTR ERVL 384 535 -22 494 272 201 10 chr5 1189549 1189843 -201895689 - L2 LINE L2 -858 2456 2107 6236 217 49 15 chr5 1189860 1191975 -201893557 + L1MB4 LINE L1 3581 5752 -428 891 254 61 7 chr5 1191976 1192256 -201893276 + L1MB4 LINE L1 5886 6180 0 683 269 126 31 chr5 1192359 1192716 -201892816 - L2 LINE L2 -1212 2102 1712 253 258 162 0 chr5 1193395 1193562 -201891970 + L2 LINE L2 2867 3060 -253 1917 79 16 4 chr5 1194124 1194378 -201891154 + L1PA6 LINE L1 5898 6154 0 331 253 65 84 chr5 1195082 1195236 -201890296 - L1M LINE L1 -2384 5424 5274 198 71 0 0 chr5 1195403 1195431 -201890101 + (TC)n Simple_repeat Simple_repeat 2 29 0 5002 158 56 8 chr5 1195831 1196693 -201888839 - MER4D LTR ERV1 0 903 1 10368 186 81 34 chr5 1196715 1197026 -201888506 + L1M4c LINE L1 14 309 -6073 4750 123 47 5 chr5 1197026 1197774 -201887758 + MER4E LTR ERV1 1 779 0 10368 186 81 34 chr5 1197774 1198112 -201887420 + L1M4c LINE L1 309 630 -5752 414 0 0 0 chr5 1198112 1198158 -201887374 + (TAA)n Simple_repeat Simple_repeat 3 48 0 10368 186 81 34 chr5 1198158 1198182 -201887350 + L1M4c LINE L1 630 651 -5731 3311 147 20 61 chr5 1198182 1198820 -201886712 + LTR9 LTR ERV1 1 612 0 10368 186 81 34 chr5 1198820 1200364 -201885168 + L1M4c LINE L1 651 2122 -4260 2166 99 25 0 chr5 1200364 1200648 -201884884 - AluSx SINE Alu -21 291 1 10368 186 81 34 chr5 1200648 1202148 -201883384 + L1M4c LINE L1 2122 3916 -2466 1471 246 131 48 chr5 1202141 1202778 -201882754 - L1ME LINE L1 -864 1577 2088 * 2072 114 4 4 chr5 1202778 1203096 -201882436 + AluSx SINE Alu 1 318 0 1471 246 131 48 chr5 1203096 1203891 -201881641 - L1ME LINE L1 -352 2089 1362 445 296 58 36 chr5 1203903 1204230 -201881302 - L1ME LINE L1 -4981 1089 841 2590 59 0 3 chr5 1204230 1204533 -201880999 - AluY SINE Alu -9 302 1 445 296 58 36 chr5 1204533 1204689 -201880843 - L1ME LINE L1 -5229 841 690 1425 184 10 37 chr5 1205242 1205536 -201879996 - AluJo SINE Alu -26 286 1 428 248 223 34 chr5 1206003 1206063 -201879469 - L1ME LINE L1 -3213 2867 2820 889 77 77 8 chr5 1206063 1206193 -201879339 + MER85 DNA T2_type 1 139 0 428 248 223 34 chr5 1206193 1206338 -201879194 - L1ME LINE L1 -3260 2820 2623 2121 121 0 29 chr5 1206338 1206644 -201878888 + AluJb SINE Alu 1 297 -15 913 128 27 0 chr5 1206767 1206916 -201878616 + Tigger1 DNA MER2_type 1516 1668 -750 299 160 120 0 chr5 1206916 1206991 -201878541 + L1MEc LINE L1 2008 2091 -4305 235 300 103 25 chr5 1207204 1207447 -201878085 - L1ME LINE L1 -3598 2482 2221 2230 112 7 0 chr5 1207631 1207926 -201877606 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 1208111 1208132 -201877400 + AT_rich Low_complexity Low_complexity 1 21 0 14907 133 36 11 chr5 1208983 1210778 -201874754 + Tigger1 DNA MER2_type 1 1871 -547 1978 108 4 0 chr5 1210778 1211036 -201874496 + AluSx SINE Alu 39 297 -15 14907 133 36 11 chr5 1211036 1211599 -201873933 + Tigger1 DNA MER2_type 1871 2418 0 290 279 52 23 chr5 1214815 1214987 -201870545 + (TG)n Simple_repeat Simple_repeat 2 178 0 342 210 10 115 chr5 1215051 1215251 -201870281 + (TG)n Simple_repeat Simple_repeat 2 180 0 289 228 21 98 chr5 1215405 1215598 -201869934 + (TG)n Simple_repeat Simple_repeat 2 179 0 1792 112 4 27 chr5 1216075 1216335 -201869197 - AluSg SINE Alu -5 305 52 3480 191 36 3 chr5 1218684 1219398 -201866134 + L1MB3 LINE L1 5407 6144 -39 2716 214 142 1 chr5 1219412 1220226 -201865306 + L1ME1 LINE L1 5222 6161 -5 1681 268 115 30 chr5 1220743 1221101 -201864431 - L1ME LINE L1 -4588 1492 1166 1673 215 0 0 chr5 1221101 1221413 -201864119 - AluJo SINE Alu 0 312 1 1681 268 115 30 chr5 1221413 1221619 -201863913 - L1ME LINE L1 -4914 1166 979 1894 122 93 34 chr5 1221619 1221973 -201863559 + THE1C LTR MaLR 1 375 0 1681 268 115 30 chr5 1221973 1222539 -201862993 - L1ME LINE L1 -5101 979 282 1701 187 3 16 chr5 1222576 1222892 -201862640 - AluJb SINE Alu 0 312 1 2257 110 0 7 chr5 1222906 1223206 -201862326 - AluSc SINE Alu -11 298 1 228 250 31 0 chr5 1223398 1223462 -201862070 - L1ME LINE L1 -5957 113 48 183 100 0 0 chr5 1223524 1223554 -201861978 + (T)n Simple_repeat Simple_repeat 1 30 0 230 239 30 0 chr5 1226157 1226224 -201859308 - LTR23 LTR ERV1 -16 421 353 384 188 76 168 chr5 1226279 1226636 -201858896 - LTR56 LTR ERV1 -121 324 1 380 153 34 117 chr5 1227049 1227349 -201858183 + CT-rich Low_complexity Low_complexity 1 275 0 250 234 16 120 chr5 1227284 1227476 -201858056 + C-rich Low_complexity Low_complexity 5 176 0 * 282 246 5 128 chr5 1227442 1227645 -201857887 + CT-rich Low_complexity Low_complexity 1 178 0 448 255 57 6 chr5 1227723 1227880 -201857652 - HAL1 LINE L1 -725 1782 1618 397 321 55 18 chr5 1228314 1228479 -201857053 - HAL1 LINE L1 -1300 1207 1037 1390 126 38 25 chr5 1233065 1233322 -201852210 - MER1B DNA MER1_type 0 339 119 226 139 0 0 chr5 1233394 1233430 -201852102 - MER1B DNA MER1_type -168 129 134 226 139 0 0 chr5 1233458 1233494 -201852038 - MER1B DNA MER1_type -168 129 134 243 108 0 0 chr5 1233614 1233651 -201851881 - MER1B DNA MER1_type -168 129 133 276 81 0 0 chr5 1233676 1233713 -201851819 - MER1B DNA MER1_type -168 129 133 225 57 57 0 chr5 1233863 1233898 -201851634 - MER1B DNA MER1_type -168 129 133 709 178 89 13 chr5 1234735 1234892 -201850640 - MER1B DNA MER1_type -168 129 1 1502 144 137 39 chr5 1235014 1235298 -201850234 + AluJo SINE Alu 1 312 0 1213 171 83 0 chr5 1236011 1236228 -201849304 + MER46A DNA MER2_type 2 236 0 1426 178 103 11 chr5 1236376 1236657 -201848875 + AluJb SINE Alu 1 307 -5 304 242 0 30 chr5 1237980 1238046 -201847486 - HAL1 LINE L1 -1344 1163 1100 1518 148 81 4 chr5 1238053 1238324 -201847208 - AluJb SINE Alu -20 292 1 2198 106 23 3 chr5 1238368 1238670 -201846862 + AluSx SINE Alu 1 308 -4 506 331 74 8 chr5 1242050 1242307 -201843225 - L1M4 LINE L1 -1701 4445 4172 3122 104 89 4 chr5 1242308 1242778 -201842754 - MER9 LTR ERVK 0 511 2 16454 92 22 1 chr5 1242779 1245435 -201840097 - HERVK9 LTR ERVK 0 8033 3304 1093 155 0 0 chr5 1245425 1245599 -201839933 - HERVK9 LTR ERVK -2487 3429 3256 * 393 152 0 0 chr5 1245600 1245666 -201839866 - HERVK9 LTR ERVK -2595 3321 3256 372 171 0 0 chr5 1245663 1245733 -201839799 - HERVK9 LTR ERVK -2591 3325 3256 * 402 136 0 0 chr5 1245734 1245800 -201839732 - HERVK9 LTR ERVK -2595 3321 3256 388 167 56 22 chr5 1245797 1245887 -201839645 - HERVK9 LTR ERVK -2591 3325 3233 * 364 159 0 0 chr5 1245864 1245933 -201839599 - HERVK9 LTR ERVK -2591 3325 3257 * 1050 123 0 0 chr5 1245998 1246153 -201839379 - HERVK9 LTR ERVK -2591 3325 3171 588 62 12 0 chr5 1246149 1246230 -201839302 - HERVK9 LTR ERVK -2681 3235 3154 * 23982 79 6 4 chr5 1246221 1249449 -201836083 - HERVK9 LTR ERVK -2684 3232 1 2961 96 123 9 chr5 1249449 1249906 -201835626 - MER9 LTR ERVK 0 511 3 224 289 91 33 chr5 1249969 1250090 -201835442 + L2 LINE L2 3142 3269 -3 443 263 51 0 chr5 1250491 1250609 -201834923 - MER3 DNA MER1_type -78 131 8 243 276 110 8 chr5 1250697 1250824 -201834708 + MLT1J LTR MaLR 93 232 -279 2329 180 43 24 chr5 1251098 1251565 -201833967 + L1PB4 LINE L1 5679 6154 -2 21 57 0 19 chr5 1252010 1252032 -201833500 + AT_rich Low_complexity Low_complexity 1 22 -30 2252 115 3 0 chr5 1252032 1252327 -201833205 + AluSx SINE Alu 1 296 -16 21 57 0 19 chr5 1252327 1252357 -201833175 + AT_rich Low_complexity Low_complexity 22 52 0 1862 131 31 17 chr5 1252528 1252819 -201832713 - AluSx SINE Alu -17 295 1 2025 137 0 16 chr5 1253119 1253425 -201832107 - AluJb SINE Alu -11 301 1 410 160 25 14 chr5 1253456 1253654 -201831878 + AluJo SINE Alu 20 294 -18 392 235 39 0 chr5 1253862 1253964 -201831568 - L1ME1 LINE L1 -182 6378 6273 1571 151 65 48 chr5 1255153 1255445 -201830087 + AluJo SINE Alu 1 297 -15 2136 129 3 0 chr5 1255778 1256072 -201829460 + AluSx SINE Alu 1 295 -17 378 289 35 0 chr5 1257087 1257201 -201828331 - L2 LINE L2 -2 3311 3194 1556 121 62 107 chr5 1257269 1257625 -201827907 + MER2 DNA MER2_type 1 340 -5 2674 50 0 0 chr5 1257657 1257960 -201827572 - AluY SINE Alu -4 307 5 469 254 208 10 chr5 1259058 1259255 -201826277 - MIR SINE MIR -10 252 17 1744 183 0 32 chr5 1259581 1259892 -201825640 + AluJb SINE Alu 1 301 -11 2434 98 0 0 chr5 1260518 1260824 -201824708 - AluSx SINE Alu -6 306 1 2194 121 3 7 chr5 1261453 1261759 -201823773 - AluSx SINE Alu -7 305 1 22 35 0 0 chr5 1261816 1261845 -201823687 + AT_rich Low_complexity Low_complexity 1 29 0 796 177 118 23 chr5 1261860 1262080 -201823452 - L1MA9 LINE L1 -5 6307 6067 3932 160 52 33 chr5 1262397 1263326 -201822206 - L1MA9 LINE L1 -204 6108 5152 205 244 44 0 chr5 1263474 1263519 -201822013 + MIR3 SINE MIR 110 156 -52 406 249 124 23 chr5 1264272 1264449 -201821083 - MER3 DNA MER1_type -14 195 1 1297 242 33 41 chr5 1267225 1267712 -201817820 - L1ME1 LINE L1 -743 5797 5375 870 302 129 11 chr5 1267725 1268166 -201817366 - L1ME1 LINE L1 -1942 4598 4106 2202 204 125 42 chr5 1268449 1269397 -201816135 - L1ME1 LINE L1 -5180 1360 16 227 254 167 53 chr5 1269400 1269514 -201816018 - MIR3 SINE MIR -79 129 3 189 247 67 79 chr5 1273082 1273171 -201812361 - MIR SINE MIR -56 206 119 * 222 303 15 0 chr5 1273167 1273233 -201812299 - MIR SINE MIR -49 213 147 801 275 84 10 chr5 1273240 1273711 -201811821 - MER68 LTR ERV1 -5 557 12 252 250 43 43 chr5 1273731 1273823 -201811709 - MIR SINE MIR -146 116 25 2215 104 13 16 chr5 1274300 1274609 -201810923 - AluSx SINE Alu -4 308 1 2093 118 10 0 chr5 1274969 1275258 -201810274 - AluSx SINE Alu -20 292 1 245 324 37 37 chr5 1276735 1276871 -201808661 + MIR SINE MIR 117 252 -10 2147 122 26 0 chr5 1279307 1279610 -201805922 + AluSx SINE Alu 1 311 -1 2518 64 0 3 chr5 1280833 1281130 -201804402 + AluY SINE Alu 1 296 -15 219 231 0 39 chr5 1283435 1283513 -201802019 + (CCCCG)n Simple_repeat Simple_repeat 2 76 0 608 206 0 0 chr5 1284519 1284645 -201800887 - MLT2B1 LTR ERVL -394 126 1 1363 78 0 22 chr5 1284780 1284960 -201800572 - AluSc SINE Alu 0 309 134 204 267 0 56 chr5 1284963 1285053 -201800479 + L2 LINE L2 3224 3308 -5 317 283 63 61 chr5 1285272 1285475 -201800057 + MIR SINE MIR 14 212 -50 1489 159 101 7 chr5 1285608 1285885 -201799647 + AluJb SINE Alu 1 303 -9 2362 85 0 0 chr5 1286903 1287197 -201798335 - AluSc SINE Alu -15 294 1 762 180 36 6 chr5 1287548 1287715 -201797817 - L1MD1 LINE L1 0 6242 6071 2531 200 32 5 chr5 1287735 1288318 -201797214 - L1MC1 LINE L1 -245 6391 5814 1265 243 32 41 chr5 1291312 1291815 -201793717 - L1MC1 LINE L1 -743 5797 5360 891 304 125 7 chr5 1291812 1292253 -201793279 - L1MC1 LINE L1 -1942 4598 4106 * 2009 220 123 40 chr5 1293005 1293953 -201791579 - L1MC1 LINE L1 -5180 1360 16 214 254 167 53 chr5 1293956 1294070 -201791462 - MIR3 SINE MIR -79 129 3 182 247 67 79 chr5 1297603 1297692 -201787840 - MIR SINE MIR -56 206 119 * 225 303 15 0 chr5 1297688 1297754 -201787778 - MIR SINE MIR -49 213 147 850 273 84 10 chr5 1297761 1298232 -201787300 - MER68 LTR ERV1 -5 557 12 261 258 34 45 chr5 1298252 1298341 -201787191 - MIR SINE MIR -146 116 29 2131 104 13 16 chr5 1298821 1299130 -201786402 - AluSx SINE Alu -4 308 1 2020 118 10 0 chr5 1299489 1299778 -201785754 - AluSx SINE Alu -20 292 1 3280 208 36 66 chr5 1304300 1305285 -201780247 + LTR5 LTR ERVK 1 956 -13 498 225 11 18 chr5 1307545 1307708 -201777824 + MER58 DNA MER1_type 40 232 -109 268 263 12 0 chr5 1310346 1310426 -201775106 + MLT1H LTR MaLR 463 543 -6 431 216 6 0 chr5 1312613 1312780 -201772752 + GA-rich Low_complexity Low_complexity 1 168 0 240 179 0 36 chr5 1312785 1312841 -201772691 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 331 261 11 0 chr5 1317768 1317860 -201767672 - L1MA10 LINE L1 -9 6325 6233 598 251 166 19 chr5 1317968 1318275 -201767257 - L1MEc LINE L1 -4182 2214 1863 724 182 0 54 chr5 1318276 1318424 -201767108 - AluJo SINE Alu -172 140 1 340 58 0 19 chr5 1318442 1318494 -201767038 - MER75 DNA T2_type 0 504 454 781 296 70 0 chr5 1318566 1318880 -201766652 - L1MEc LINE L1 -4653 1743 1408 1077 191 70 8 chr5 1318903 1319121 -201766411 + MLT2B3 LTR ERVL 282 520 -34 702 93 0 0 chr5 1319121 1319229 -201766303 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 1077 191 70 8 chr5 1319229 1319267 -201766265 + MLT2B3 LTR ERVL 520 554 0 1396 288 73 67 chr5 1319268 1319431 -201766101 - L1MEc LINE L1 -5249 1147 986 2152 64 8 0 chr5 1319431 1319697 -201765835 - AluY SINE Alu -22 289 22 1396 288 73 67 chr5 1319697 1320646 -201764886 - L1MEc LINE L1 -5410 986 29 553 279 107 32 chr5 1321868 1322232 -201763300 + HAL1 LINE L1 1720 2140 -367 471 332 158 46 chr5 1322873 1323477 -201762055 + L1ME LINE L1 607 1148 -4965 587 252 64 36 chr5 1323852 1324102 -201761430 + L1ME LINE L1 2196 2452 -3944 1051 215 119 10 chr5 1324109 1324420 -201761112 - MER2 DNA MER2_type 0 345 1 649 290 60 17 chr5 1324420 1324772 -201760760 + L1ME LINE L1 2423 2789 -3426 552 253 179 16 chr5 1324811 1325119 -201760413 + MER50 LTR ERV1 10 367 -367 1592 196 76 10 chr5 1325288 1325685 -201759847 + MER50 LTR ERV1 312 734 0 1054 268 55 29 chr5 1325694 1326149 -201759383 + L1ME LINE L1 2852 3318 -2897 1497 210 146 7 chr5 1326369 1326779 -201758753 + LTR24 LTR ERV1 1 467 0 884 263 46 52 chr5 1328254 1328638 -201756894 + LTR24 LTR ERV1 186 467 0 446 238 0 48 chr5 1328639 1328786 -201756746 + (CCCCAG)n Simple_repeat Simple_repeat 2 141 0 332 181 0 58 chr5 1328816 1328971 -201756561 + (CCCCAG)n Simple_repeat Simple_repeat 3 148 0 502 231 9 0 chr5 1331324 1331432 -201754100 + LTR55 LTR ERV 119 227 -321 2182 114 3 0 chr5 1332519 1332818 -201752714 + AluSg SINE Alu 1 300 -10 2165 105 0 25 chr5 1333945 1334259 -201751273 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr5 1335198 1335219 -201750313 + AT_rich Low_complexity Low_complexity 1 21 0 697 171 13 7 chr5 1336404 1336562 -201748970 + MER1B DNA MER1_type 1 129 -168 1344 126 34 25 chr5 1338253 1338511 -201747021 + MER1B DNA MER1_type 119 339 0 444 324 53 18 chr5 1343091 1343261 -201742271 + HAL1 LINE L1 1032 1207 -1300 343 263 33 70 chr5 1343695 1343908 -201741624 + HAL1 LINE L1 1618 1822 -685 332 257 0 46 chr5 1344454 1344629 -201740903 + C-rich Low_complexity Low_complexity 2 168 0 216 310 46 35 chr5 1347074 1347161 -201738371 + MIR SINE MIR 171 258 -4 748 142 0 0 chr5 1347745 1347858 -201737674 + AluJb SINE Alu 1 113 -199 1218 157 44 0 chr5 1348646 1348850 -201736682 + AluJb SINE Alu 85 297 -15 558 132 0 0 chr5 1349089 1349165 -201736367 - FLAM_A SINE Alu -24 118 43 2026 110 0 14 chr5 1349732 1349901 -201735631 - AluY SINE Alu -11 300 135 2378 75 13 0 chr5 1349901 1350207 -201735325 - AluY SINE Alu 0 311 2 2026 110 0 14 chr5 1350207 1350329 -201735203 - AluY SINE Alu -176 135 13 1538 97 14 0 chr5 1350332 1350549 -201734983 + AluSg/x SINE Alu 90 309 -1 518 274 42 58 chr5 1350833 1351035 -201734497 - L2 LINE L2 0 3313 3114 1886 160 3 13 chr5 1351035 1351347 -201734185 + AluJb SINE Alu 1 309 -3 518 274 42 58 chr5 1351347 1351385 -201734147 - L2 LINE L2 -199 3114 3077 207 0 0 0 chr5 1352391 1352414 -201733118 + (A)n Simple_repeat Simple_repeat 1 23 0 280 128 0 0 chr5 1352435 1352482 -201733050 - MADE1 DNA Mariner -33 47 1 257 381 32 23 chr5 1352577 1352795 -201732737 - L2 LINE L2 -199 3073 2854 334 273 75 7 chr5 1352809 1353010 -201732522 - L2 LINE L2 -339 2974 2748 281 339 35 12 chr5 1359893 1360064 -201725468 + MLT1K LTR MaLR 413 587 -1 311 65 22 0 chr5 1360854 1360900 -201724632 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr5 1361176 1361197 -201724335 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 250 268 78 42 chr5 1364306 1364448 -201721084 - L1ME LINE L1 -347 5823 5677 277 243 9 37 chr5 1364706 1364813 -201720719 - L1ME LINE L1 -763 5399 5296 2207 122 0 0 chr5 1364819 1365131 -201720401 - AluSx SINE Alu 0 312 1 332 324 65 6 chr5 1365240 1365410 -201720122 - L2 LINE L2 -433 2881 2702 1238 310 47 19 chr5 1366610 1367596 -201717936 + L1ME1 LINE L1 4976 5994 -172 2885 171 36 2 chr5 1368309 1368787 -201716745 - LOR1a LTR ERV1 0 497 4 365 342 81 52 chr5 1368973 1369318 -201716214 + L1ME3A LINE L1 5682 6036 -134 697 253 45 5 chr5 1370056 1370254 -201715278 - L1MA10 LINE L1 -10 6324 6119 201 381 0 0 chr5 1371581 1371741 -201713791 + C-rich Low_complexity Low_complexity 1 160 0 2316 84 0 0 chr5 1372126 1372423 -201713109 - AluY SINE Alu -14 297 1 23 0 0 0 chr5 1372425 1372448 -201713084 + AT_rich Low_complexity Low_complexity 1 23 0 463 252 94 30 chr5 1372634 1372984 -201712548 + MER77 LTR ERV1 1 451 -154 342 0 0 0 chr5 1374645 1374683 -201710849 + (TG)n Simple_repeat Simple_repeat 1 38 0 195 42 0 0 chr5 1374766 1374790 -201710742 + (TG)n Simple_repeat Simple_repeat 1 24 0 213 39 0 0 chr5 1375066 1375092 -201710440 + (TG)n Simple_repeat Simple_repeat 1 26 0 225 290 0 0 chr5 1376232 1376301 -201709231 - MER20B DNA MER1_type -234 549 481 638 267 117 114 chr5 1376878 1377376 -201708156 - L1MEd LINE L1 -4960 1159 661 732 203 0 8 chr5 1377430 1377563 -201707969 - FLAM_A SINE Alu 0 133 2 1979 131 30 7 chr5 1384256 1384561 -201700971 - AluSx SINE Alu 0 312 1 1181 136 0 0 chr5 1385240 1385416 -201700116 + AluSg/x SINE Alu 137 312 0 862 198 19 6 chr5 1386041 1386198 -201699334 - AluJb SINE Alu -14 298 140 866 216 6 22 chr5 1386253 1386434 -201699098 - AluJb SINE Alu -13 299 122 225 337 0 0 chr5 1390575 1390661 -201694871 + C-rich Low_complexity Low_complexity 1 86 0 1850 126 3 11 chr5 1392348 1392633 -201692899 + AluSx SINE Alu 6 288 -24 184 278 63 40 chr5 1392838 1392964 -201692568 - L2 LINE L2 -332 2981 2853 24 53 0 0 chr5 1394141 1394179 -201691353 + GC_rich Low_complexity Low_complexity 1 38 0 187 349 128 0 chr5 1394947 1395033 -201690499 - MIR SINE MIR -118 144 48 2006 134 0 34 chr5 1396274 1396679 -201688853 - AluSg SINE Alu 0 394 1 1639 101 0 13 chr5 1396830 1397058 -201688474 + AluSp SINE Alu 86 310 -3 2281 97 0 0 chr5 1398013 1398324 -201687208 - AluSq SINE Alu -2 311 1 3503 204 39 40 chr5 1398340 1399019 -201686513 - L1MB5 LINE L1 -9 6165 5487 2088 103 3 3 chr5 1399019 1399309 -201686223 + AluSx SINE Alu 1 290 -22 3503 204 39 40 chr5 1399309 1399471 -201686061 - L1MB5 LINE L1 -687 5487 5323 2887 196 16 2 chr5 1399471 1400018 -201685514 - L1PB4 LINE L1 0 6156 5602 2912 49 0 0 chr5 1400026 1400375 -201685157 - L1PA4 LINE L1 0 6155 5807 2077 114 19 33 chr5 1400375 1400498 -201685034 - L1PB4 LINE L1 -687 5616 5493 2048 102 58 0 chr5 1400498 1400793 -201684739 - AluSx SINE Alu 0 312 1 2077 114 19 33 chr5 1400793 1401138 -201684394 - L1PB4 LINE L1 -810 5493 5150 987 179 53 11 chr5 1401179 1401369 -201684163 + THE1C LTR MaLR 1 198 -177 1566 189 16 26 chr5 1401442 1401748 -201683784 - AluJo SINE Alu -9 303 1 8925 175 69 53 chr5 1401751 1402626 -201682906 - L1PB4 LINE L1 -1505 4641 3782 1773 154 14 0 chr5 1402626 1402906 -201682626 - AluSx SINE Alu -22 290 7 8925 175 69 53 chr5 1402906 1403112 -201682420 - L1PB4 LINE L1 -2364 3782 3581 2321 66 0 13 chr5 1403112 1403417 -201682115 - AluSc SINE Alu -8 301 1 8925 175 69 53 chr5 1403417 1403851 -201681681 - L1PB4 LINE L1 -2565 3581 3155 2304 139 3 15 chr5 1403851 1404190 -201681342 + MER1B DNA MER1_type 1 335 -2 8925 175 69 53 chr5 1404190 1404506 -201681026 - L1PB4 LINE L1 -2991 3155 2846 2357 89 0 0 chr5 1404506 1404808 -201680724 - AluSg SINE Alu -8 302 1 8925 175 69 53 chr5 1404808 1405326 -201680206 - L1PB4 LINE L1 -3300 2846 2251 798 154 0 0 chr5 1405332 1405449 -201680083 - FLAM_C SINE Alu -25 118 2 9387 235 53 52 chr5 1405454 1405558 -201679974 - L1M4c LINE L1 -3886 2964 2862 2141 123 0 0 chr5 1405558 1405858 -201679674 + AluSx SINE Alu 3 302 -10 9387 235 53 52 chr5 1405858 1408700 -201676832 - L1M4c LINE L1 -3988 2862 13 1632 186 14 132 chr5 1408706 1409265 -201676267 - L1M4 LINE L1 -810 5336 4844 1208 142 0 26 chr5 1409642 1409832 -201675700 - AluJb SINE Alu -33 279 95 27 0 0 0 chr5 1409835 1409862 -201675670 + AT_rich Low_complexity Low_complexity 1 27 0 385 309 51 6 chr5 1410118 1410293 -201675239 - LTR41 LTR ERVL -590 183 1 1113 286 94 6 chr5 1410326 1410802 -201674730 - L1MEc LINE L1 -4434 1962 1445 871 143 8 0 chr5 1410803 1410936 -201674596 + AluJb SINE Alu 1 134 -178 427 279 53 13 chr5 1410937 1411163 -201674369 - L1MEc LINE L1 -4942 1454 1220 2808 222 60 68 chr5 1411166 1411349 -201674183 - L1M4 LINE L1 -1734 4412 4229 1739 159 3 41 chr5 1411349 1411663 -201673869 - AluJo SINE Alu -10 302 1 2808 222 60 68 chr5 1411663 1412537 -201672995 - L1M4 LINE L1 -1917 4229 3350 1679 183 55 33 chr5 1412537 1412903 -201672629 - MLT1A2 LTR MaLR 0 374 1 225 0 0 0 chr5 1412907 1412932 -201672600 + (TA)n Simple_repeat Simple_repeat 1 25 0 2282 101 0 3 chr5 1412932 1413240 -201672292 - AluSq SINE Alu -6 307 1 2181 125 0 0 chr5 1413246 1413557 -201671975 - AluSx SINE Alu -1 311 1 2808 222 60 68 chr5 1413557 1413728 -201671804 - L1M4 LINE L1 -2803 3343 3179 213 121 0 0 chr5 1413728 1413761 -201671771 + (TCCCC)n Simple_repeat Simple_repeat 3 35 0 1073 140 38 11 chr5 1413761 1413947 -201671585 - AluSg/x SINE Alu -2 310 120 2471 223 101 13 chr5 1413947 1414801 -201670731 - L1M4 LINE L1 -2980 3166 2238 244 200 17 0 chr5 1416686 1416806 -201668726 + (TG)n Simple_repeat Simple_repeat 1 122 0 387 112 10 92 chr5 1416818 1417014 -201668518 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 246 16 33 chr5 1417080 1417263 -201668269 + (TG)n Simple_repeat Simple_repeat 1 180 0 548 145 0 25 chr5 1417299 1417458 -201668074 + (TG)n Simple_repeat Simple_repeat 2 156 0 350 114 14 0 chr5 1417615 1417685 -201667847 + (TG)n Simple_repeat Simple_repeat 2 72 0 279 231 51 39 chr5 1417952 1418030 -201667502 - LTR40c LTR ERVL -274 191 113 822 268 49 4 chr5 1418778 1419024 -201666508 + LTR40b LTR ERVL 196 452 -10 243 263 100 0 chr5 1419037 1419117 -201666415 - L1ME LINE L1 -469 5652 5565 369 208 144 58 chr5 1419171 1419344 -201666188 - L1ME LINE L1 -2366 5442 5255 2786 235 75 35 chr5 1420424 1421361 -201664171 - L1ME1 LINE L1 -5 6161 5128 2446 58 0 10 chr5 1421361 1421671 -201663861 + AluY SINE Alu 1 307 -4 2786 235 75 35 chr5 1421671 1422364 -201663168 - L1ME1 LINE L1 -1038 5128 4464 3920 221 25 2 chr5 1422836 1423819 -201661713 + L1MB5 LINE L1 5170 6172 -2 818 258 48 98 chr5 1431634 1432034 -201653498 + MLT1B LTR MaLR 3 382 -8 3497 241 67 33 chr5 1432034 1432601 -201652931 + MLT1A2-int LTR MaLR 15 561 -1174 2051 99 32 0 chr5 1432601 1432885 -201652647 + AluSg1 SINE Alu 1 293 -16 3497 241 67 33 chr5 1432885 1433617 -201651915 + MLT1A2-int LTR MaLR 561 1735 0 1564 193 45 58 chr5 1433617 1433996 -201651536 + MLT1A2 LTR MaLR 1 374 0 396 337 22 71 chr5 1435719 1436120 -201649412 + L1MDa LINE L1 1846 2242 -4298 1162 308 92 10 chr5 1436187 1437263 -201648269 + L1MDa LINE L1 2436 3574 -2966 513 235 42 25 chr5 1437332 1437570 -201647962 + L1MDa LINE L1 3727 3968 -2572 2300 240 90 74 chr5 1437581 1438571 -201646961 + L1MC4a LINE L1 6540 7545 -263 267 267 27 0 chr5 1438658 1438733 -201646799 + L1MC4 LINE L1 7965 8041 -1 476 248 151 31 chr5 1442558 1442933 -201642599 - MLT2B2 LTR ERVL -2 513 57 22 35 0 0 chr5 1445463 1445492 -201640040 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 1445570 1445591 -201639941 + GC_rich Low_complexity Low_complexity 1 21 0 301 172 78 0 chr5 1450114 1450178 -201635354 - U3 snRNA snRNA -147 70 2 8275 225 61 62 chr5 1450608 1452431 -201633101 - L1ME1 LINE L1 -18 6082 4259 2622 204 40 42 chr5 1452431 1452984 -201632548 - MLT2B3 LTR ERVL -2 552 1 8275 225 61 62 chr5 1452984 1453187 -201632345 - L1ME1 LINE L1 -1841 4259 4057 2399 78 3 3 chr5 1453187 1453494 -201632038 - AluSg SINE Alu -3 307 1 8275 225 61 62 chr5 1453494 1455235 -201630297 - L1ME1 LINE L1 -2043 4057 2319 1709 161 13 32 chr5 1455235 1455545 -201629987 - AluJo SINE Alu -8 304 1 8275 225 61 62 chr5 1455545 1456112 -201629420 - L1ME1 LINE L1 -3781 2319 1753 2057 132 7 0 chr5 1456113 1456401 -201629131 - AluSq SINE Alu -23 290 1 317 299 0 36 chr5 1456793 1456960 -201628572 + (CTGGGG)n Simple_repeat Simple_repeat 2 162 0 1813 138 14 30 chr5 1457626 1457923 -201627609 - AluJb SINE Alu -20 292 1 238 221 23 29 chr5 1458722 1459307 -201626225 + G-rich Low_complexity Low_complexity 1 581 0 257 266 3 74 chr5 1462424 1462624 -201622908 + C-rich Low_complexity Low_complexity 1 185 0 3645 221 26 2 chr5 1463234 1464216 -201621316 + L1MB5 LINE L1 5170 6172 -2 716 258 48 98 chr5 1470940 1471340 -201614192 + MLT1B LTR MaLR 3 382 -8 2212 192 72 18 chr5 1471340 1471907 -201613625 + MLT1B-int LTR MaLR 15 612 -759 2342 63 0 10 chr5 1471920 1472219 -201613313 + AluY SINE Alu 12 307 -4 1669 232 59 33 chr5 1472237 1472901 -201612631 - L1M4 LINE L1 -991 5155 4475 1737 263 82 24 chr5 1473351 1473488 -201612044 - L1ME1 LINE L1 -4398 1682 1554 1719 93 4 0 chr5 1473488 1473714 -201611818 + AluSg SINE Alu 1 227 -83 1737 263 82 24 chr5 1473714 1473786 -201611746 - L1ME1 LINE L1 -4526 1554 1488 1762 196 6 6 chr5 1473786 1474098 -201611434 - AluJo SINE Alu 0 312 1 1737 263 82 24 chr5 1474098 1474907 -201610625 - L1ME1 LINE L1 -4592 1488 627 1663 223 94 28 chr5 1474907 1475377 -201610155 + MLT1D LTR MaLR 1 501 -4 1737 263 82 24 chr5 1475377 1475429 -201610103 - L1ME1 LINE L1 -5453 627 579 301 299 112 48 chr5 1475728 1476022 -201609510 - L1ME1 LINE L1 -5573 497 185 795 209 199 67 chr5 1476391 1476797 -201608735 - MLT1C LTR MaLR -2 465 6 256 319 92 18 chr5 1476944 1477107 -201608425 - MIR SINE MIR -32 230 56 391 341 17 23 chr5 1478456 1478662 -201606870 + GA-rich Low_complexity Low_complexity 1 204 0 559 345 33 86 chr5 1478670 1478737 -201606795 + HAL1 LINE L1 877 946 -1561 1283 201 34 0 chr5 1478737 1478976 -201606556 + L1MA2 LINE L1 6058 6304 0 559 345 33 86 chr5 1478976 1479267 -201606265 + HAL1 LINE L1 946 1216 -1291 317 302 0 0 chr5 1479355 1479451 -201606081 + HAL1 LINE L1 1397 1492 -1015 429 205 0 76 chr5 1479936 1480121 -201605411 + (CGGGG)n Simple_repeat Simple_repeat 2 172 0 204 177 55 37 chr5 1480122 1480286 -201605246 + (CAGGG)n Simple_repeat Simple_repeat 5 171 0 321 223 29 43 chr5 1480302 1480441 -201605091 + (CAGGG)n Simple_repeat Simple_repeat 5 141 0 334 371 14 68 chr5 1480444 1480724 -201604808 + HAL1 LINE L1 2211 2475 -32 2173 103 33 0 chr5 1481604 1481905 -201603627 - AluSx SINE Alu -1 311 1 305 299 13 25 chr5 1487570 1487710 -201597822 - MIR SINE MIR -59 149 44 331 266 62 0 chr5 1489823 1489936 -201595596 + L1M3 LINE L1 5700 5819 -364 958 243 43 0 chr5 1489941 1490359 -201595173 + L1M2 LINE L1 5115 5547 -744 277 160 0 0 chr5 1490366 1490416 -201595116 + L1MB3 LINE L1 5498 5547 -757 265 160 0 0 chr5 1490423 1490473 -201595059 + L1MB3 LINE L1 5498 5547 -757 265 160 0 0 chr5 1490480 1490530 -201595002 + L1MB3 LINE L1 5498 5547 -758 1700 223 23 56 chr5 1490537 1491057 -201594475 + L1MA8 LINE L1 5498 6000 -291 904 218 125 0 chr5 1491070 1491359 -201594173 + L1MB3 LINE L1 5817 6141 -42 2322 83 3 7 chr5 1491370 1491671 -201593861 + AluSx SINE Alu 1 300 -12 240 293 61 0 chr5 1493738 1493837 -201591695 + LTR37A LTR ERV1 302 406 -20 426 399 42 40 chr5 1494436 1494880 -201590652 + L1M4 LINE L1 3442 3888 -2258 546 349 91 22 chr5 1494937 1495535 -201589997 - L1M4 LINE L1 -1229 4917 4255 2111 95 10 14 chr5 1495535 1495852 -201589680 - AluSq SINE Alu 0 313 1 546 349 91 22 chr5 1495852 1496010 -201589522 - L1M4 LINE L1 -1891 4255 4109 683 313 0 0 chr5 1496019 1496214 -201589318 - MER58A DNA MER1_type -2 222 28 788 365 31 15 chr5 1496249 1496985 -201588547 - L1M4 LINE L1 -2043 4103 3356 * 2079 268 80 10 chr5 1496984 1498065 -201587467 - L1ME2 LINE L1 -141 6023 4865 1081 226 36 39 chr5 1498112 1498213 -201587319 - L1ME2 LINE L1 -1394 4752 4652 1871 140 13 48 chr5 1498213 1498527 -201587005 - AluJo SINE Alu -9 303 1 1081 226 36 39 chr5 1498527 1498784 -201586748 - L1ME2 LINE L1 -1494 4652 4395 * 1119 249 40 34 chr5 1498782 1499255 -201586277 - L1ME2 LINE L1 -2615 3531 3056 293 284 29 7 chr5 1499479 1499642 -201585890 + L1ME LINE L1 5265 5431 -739 655 316 165 34 chr5 1500157 1500720 -201584812 + L1 LINE L1 3307 3943 -2203 1689 113 0 0 chr5 1500725 1500954 -201584578 - AluSg/x SINE Alu -1 309 81 2316 85 0 0 chr5 1501998 1502304 -201583228 + AluSg SINE Alu 1 306 -4 480 353 39 62 chr5 1502501 1502807 -201582725 + L1MEd LINE L1 636 934 -5185 2182 101 7 7 chr5 1507456 1507753 -201577779 - AluSx SINE Alu -15 297 1 390 168 22 0 chr5 1509075 1509212 -201576320 + (CACG)n Simple_repeat Simple_repeat 4 143 0 27 29 0 0 chr5 1512916 1512950 -201572582 + AT_rich Low_complexity Low_complexity 1 34 0 207 0 0 0 chr5 1513601 1513624 -201571908 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 60 6 6 chr5 1513626 1513809 -201571723 - AluY SINE Alu -32 279 97 588 198 25 0 chr5 1514295 1514416 -201571116 - MER63 DNA MER1_type -312 750 1 996 151 3 8 chr5 1514498 1514854 -201570678 + (TGGA)n Simple_repeat Simple_repeat 1 355 0 1019 137 4 6 chr5 1514895 1515417 -201570115 + (TGGA)n Simple_repeat Simple_repeat 1 521 0 206 273 0 0 chr5 1515668 1515712 -201569820 - MIR3 SINE MIR -13 195 152 237 100 50 0 chr5 1515870 1515910 -201569622 - Charlie3 DNA MER1_type -65 2645 2604 3214 141 17 30 chr5 1516825 1517356 -201568176 - MER1A DNA MER1_type -3 524 1 896 144 0 14 chr5 1525420 1525559 -201559973 + AluJo SINE Alu 1 137 -175 2084 148 0 0 chr5 1527417 1527728 -201557804 - AluSx SINE Alu -1 311 1 243 287 83 46 chr5 1527920 1528028 -201557504 - L2 LINE L2 -1 3271 3160 396 285 51 43 chr5 1528436 1528671 -201556861 - L1M4 LINE L1 -813 5333 5097 437 373 54 19 chr5 1529179 1529495 -201556037 - L1MEd LINE L1 -5733 386 60 1804 136 0 52 chr5 1529533 1529841 -201555691 - AluSx SINE Alu -20 292 1 2407 57 3 13 chr5 1529851 1530165 -201555367 - AluY SINE Alu 0 311 1 399 113 0 0 chr5 1531544 1531615 -201553917 + (CGG)n Simple_repeat Simple_repeat 1 71 0 341 306 131 31 chr5 1532826 1533048 -201552484 + L1ME4a LINE L1 5795 6038 -83 239 264 80 24 chr5 1533180 1533305 -201552227 + L1ME4a LINE L1 5990 6121 0 2487 54 0 16 chr5 1533674 1533990 -201551542 - AluY SINE Alu 0 311 1 2244 109 3 3 chr5 1534910 1535222 -201550310 + AluSx SINE Alu 1 312 0 2798 203 45 3 chr5 1537614 1538265 -201547267 - L1MB3 LINE L1 -2 6417 5740 * 9787 178 63 35 chr5 1538244 1538299 -201547233 - L1MB3 LINE L1 -3180 3202 3150 2216 85 0 0 chr5 1538299 1538607 -201546925 + AluSq SINE Alu 1 308 0 9787 178 63 35 chr5 1538607 1541638 -201543894 - L1MB3 LINE L1 -3232 3150 25 325 338 54 22 chr5 1542646 1542868 -201542664 - MIR SINE MIR -29 233 5 180 0 0 0 chr5 1543204 1543224 -201542308 + (T)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 1543980 1544008 -201541524 + AT_rich Low_complexity Low_complexity 1 28 0 1640 71 0 5 chr5 1544028 1544239 -201541293 - AluY SINE Alu -101 210 1 920 227 14 0 chr5 1544436 1544643 -201540889 + MER2 DNA MER2_type 1 210 -135 21 0 0 0 chr5 1544644 1544665 -201540867 + AT_rich Low_complexity Low_complexity 1 21 0 265 221 59 0 chr5 1544768 1544836 -201540696 - L2 LINE L2 -18 3295 3224 655 165 0 0 chr5 1546746 1546843 -201538689 - AluSg/x SINE Alu -19 291 195 253 257 118 40 chr5 1548571 1548723 -201536809 - L1MC5 LINE L1 -817 7144 6981 21 0 0 0 chr5 1548945 1548966 -201536566 + AT_rich Low_complexity Low_complexity 1 21 0 277 220 90 33 chr5 1549089 1549118 -201536414 - AluJo/F(R)AM SINE Alu -79 223 262 2257 110 0 0 chr5 1549118 1549418 -201536114 + AluSg SINE Alu 1 300 -10 277 220 90 33 chr5 1549418 1549514 -201536018 - AluJo/F(R)AM SINE Alu -39 263 174 400 343 45 8 chr5 1550418 1550552 -201534980 + L1ME4a LINE L1 3698 3836 -2310 2069 108 7 0 chr5 1550605 1550893 -201534639 + AluSp SINE Alu 1 290 -23 421 327 59 96 chr5 1551061 1551729 -201533803 + L1ME4a LINE L1 5256 5882 -239 332 314 54 76 chr5 1557407 1557722 -201527810 + L1M2 LINE L1 1603 1910 -4939 2178 90 10 10 chr5 1558158 1558447 -201527085 + AluSx SINE Alu 1 289 -23 200 188 0 0 chr5 1559240 1559272 -201526260 + MIR SINE MIR 219 250 -12 213 209 0 23 chr5 1559627 1559670 -201525862 + (CACG)n Simple_repeat Simple_repeat 3 44 0 22 0 0 0 chr5 1562307 1562329 -201523203 + GC_rich Low_complexity Low_complexity 1 22 0 29 60 0 0 chr5 1562409 1562459 -201523073 + GC_rich Low_complexity Low_complexity 1 50 0 22 80 0 0 chr5 1562670 1562720 -201522812 + GC_rich Low_complexity Low_complexity 1 50 0 209 262 16 71 chr5 1563489 1563672 -201521860 + GA-rich Low_complexity Low_complexity 2 174 0 241 271 6 55 chr5 1563924 1564105 -201521427 + GA-rich Low_complexity Low_complexity 5 176 0 2063 109 3 0 chr5 1570159 1570442 -201515090 - AluSx SINE Alu -15 297 14 23 0 0 0 chr5 1573420 1573443 -201512089 + AT_rich Low_complexity Low_complexity 1 23 0 203 187 13 80 chr5 1575816 1575891 -201509641 + G-rich Low_complexity Low_complexity 1 70 0 328 137 37 100 chr5 1576468 1576658 -201508874 + (CACCG)n Simple_repeat Simple_repeat 2 179 0 373 132 49 81 chr5 1576723 1577101 -201508431 + (CACCG)n Simple_repeat Simple_repeat 1 365 0 238 268 0 0 chr5 1577114 1577170 -201508362 + MLT1B LTR MaLR 330 385 -5 2324 78 0 0 chr5 1577209 1577503 -201508029 - AluSx SINE Alu -18 294 1 21 0 0 0 chr5 1778789 1778810 -201306722 + AT_rich Low_complexity Low_complexity 1 21 0 205 330 29 10 chr5 1779101 1779204 -201306328 + (CATA)n Simple_repeat Simple_repeat 3 107 0 * 215 314 0 14 chr5 1779136 1779206 -201306326 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 566 220 6 12 chr5 1781837 1782482 -201303050 + (CTCA)n Simple_repeat Simple_repeat 1 641 0 466 241 6 6 chr5 1782846 1783176 -201302356 + (CTCA)n Simple_repeat Simple_repeat 1 330 0 206 231 15 0 chr5 1783208 1783273 -201302259 + (CTCA)n Simple_repeat Simple_repeat 2 67 0 263 245 11 0 chr5 1783375 1783469 -201302063 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 1990 156 38 26 chr5 1784062 1784297 -201301235 - MSTB LTR MaLR 0 426 182 2166 139 18 0 chr5 1784297 1784628 -201300904 - MER1B DNA MER1_type 0 337 1 1990 156 38 26 chr5 1784628 1784809 -201300723 - MSTB LTR MaLR -244 182 5 501 183 26 0 chr5 1784800 1784915 -201300617 - MSTB LTR MaLR -304 122 5 * 501 183 26 0 chr5 1784906 1785021 -201300511 - MSTB LTR MaLR -304 122 5 252 149 60 0 chr5 1785012 1785079 -201300453 - MSTB2 LTR MaLR -319 138 68 * 2116 115 3 6 chr5 1787883 1788196 -201297336 - AluSx SINE Alu 0 312 1 374 289 66 68 chr5 1789438 1789874 -201295658 - MLT1D LTR MaLR -3 464 1 567 283 60 92 chr5 1789887 1790255 -201295277 - MLT1D-int LTR MaLR -15 1356 1001 223 354 12 6 chr5 1791291 1791455 -201294077 + C-rich Low_complexity Low_complexity 3 167 0 * 272 193 0 86 chr5 1791351 1791548 -201293984 + CT-rich Low_complexity Low_complexity 1 180 0 * 410 145 0 88 chr5 1791409 1791774 -201293758 + (CCTCG)n Simple_repeat Simple_repeat 1 332 0 372 270 22 28 chr5 1792569 1792805 -201292727 + G-rich Low_complexity Low_complexity 1 234 0 444 180 81 12 chr5 1794801 1794962 -201290570 + (CCCCAG)n Simple_repeat Simple_repeat 6 177 0 765 208 0 0 chr5 1795411 1795589 -201289943 + (CTCA)n Simple_repeat Simple_repeat 1 178 0 210 315 0 14 chr5 1803069 1803142 -201282390 + G-rich Low_complexity Low_complexity 4 75 0 47 104 0 0 chr5 1805412 1805585 -201279947 + GC_rich Low_complexity Low_complexity 1 173 0 1643 98 102 70 chr5 1807269 1807554 -201277978 - AluSx SINE Alu -15 297 4 240 366 12 6 chr5 1813461 1813633 -201271899 + (TATG)n Simple_repeat Simple_repeat 1 173 0 * 309 336 0 0 chr5 1813558 1813671 -201271861 + (TG)n Simple_repeat Simple_repeat 1 113 0 183 42 0 0 chr5 1817356 1817380 -201268152 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 1184 101 28 11 chr5 1818502 1818680 -201266852 + L1PA10 LINE L1 5978 6158 -10 2210 101 0 3 chr5 1818735 1819032 -201266500 + AluSg SINE Alu 1 296 -14 676 260 97 8 chr5 1819248 1819506 -201266026 + L1ME3A LINE L1 5584 5864 -306 831 227 122 18 chr5 1819776 1820111 -201265421 + MLT1B LTR MaLR 21 390 0 429 180 79 29 chr5 1820138 1820277 -201265255 + L1ME3A LINE L1 6020 6165 -5 229 319 36 0 chr5 1820349 1820487 -201265045 + L1MC4 LINE L1 6963 7105 -937 424 337 137 4 chr5 1820489 1820738 -201264794 + L1M4 LINE L1 2802 3083 -3063 2026 119 7 0 chr5 1821213 1821507 -201264025 - AluSx SINE Alu -16 296 1 1676 154 222 3 chr5 1823458 1823809 -201261723 + MSTA LTR MaLR 1 428 0 8648 130 18 52 chr5 1823811 1824231 -201261301 + MSTA-int LTR MaLR 3 436 -1144 1899 145 9 28 chr5 1824231 1824549 -201260983 - AluSx SINE Alu 0 312 1 8648 130 18 52 chr5 1824549 1825756 -201259776 + MSTA-int LTR MaLR 436 1575 -5 1751 148 195 11 chr5 1825764 1826123 -201259409 + MSTA LTR MaLR 4 428 0 480 235 53 8 chr5 1827723 1827855 -201257677 + MER34 LTR ERV1 120 257 -285 1389 189 261 3 chr5 1827915 1828291 -201257241 - MER101 LTR ERV1 -1 473 1 344 336 35 0 chr5 1828295 1828438 -201257094 + MER34 LTR ERV1 356 503 -39 1236 152 140 16 chr5 1828886 1829143 -201256389 - MSTA LTR MaLR -139 289 1 9221 134 9 40 chr5 1829143 1830771 -201254761 - MSTA-int LTR MaLR 0 1580 3 1816 126 161 34 chr5 1830773 1830819 -201254713 - MSTA LTR MaLR 0 428 389 2328 81 0 3 chr5 1830819 1831123 -201254409 - AluSq SINE Alu 0 303 1 1816 126 161 34 chr5 1831123 1831455 -201254077 - MSTA LTR MaLR -39 389 1 1721 159 26 16 chr5 1834612 1834920 -201250612 + AluJo SINE Alu 1 311 -1 292 281 56 0 chr5 1837481 1837570 -201247962 - MER58B DNA MER1_type -6 335 242 1150 240 68 29 chr5 1837659 1838205 -201247327 + L1MEc LINE L1 871 1437 -5170 524 205 150 0 chr5 1838207 1838334 -201247198 + MER3 DNA MER1_type 64 209 0 255 240 0 0 chr5 1838294 1838344 -201247188 - MER3 DNA MER1_type -122 87 38 * 380 282 89 8 chr5 1838350 1838474 -201247058 + L1MEc LINE L1 2238 2371 -4055 1284 266 112 24 chr5 1838484 1839426 -201246106 + L1MEc LINE L1 2452 3494 -2932 344 284 40 57 chr5 1839480 1839656 -201245876 + L1MEc LINE L1 4383 4555 -1871 205 178 0 0 chr5 1840542 1840587 -201244945 + A-rich Low_complexity Low_complexity 1 45 0 2101 101 39 3 chr5 1840590 1840876 -201244656 - AluSg SINE Alu -14 296 1 194 0 39 0 chr5 1841235 1841261 -201244271 + (TG)n Simple_repeat Simple_repeat 2 28 0 606 265 52 13 chr5 1841924 1842154 -201243378 - Charlie5 DNA MER1_type -35 2577 2339 613 306 8 35 chr5 1843425 1843680 -201241852 + L1MEd LINE L1 30 277 -5768 2809 248 83 15 chr5 1843740 1845133 -201240399 + L1MEd LINE L1 223 1689 -4854 1985 243 23 2 chr5 1845133 1845606 -201239926 + L1MC3 LINE L1 7302 7784 -1 22 0 0 0 chr5 1845612 1845634 -201239898 + AT_rich Low_complexity Low_complexity 1 22 0 250 329 0 0 chr5 1845903 1845982 -201239550 + MIR3 SINE MIR 110 188 -20 321 248 127 6 chr5 1847191 1847348 -201238184 + LTR52 LTR ERVL 167 342 -79 230 359 23 8 chr5 1847586 1847714 -201237818 + MIR3 SINE MIR 71 200 -8 533 271 39 0 chr5 1849927 1850082 -201235450 + MER69 DNA AcHobo 72 232 -994 283 261 49 28 chr5 1851621 1851763 -201233769 + L1MEd LINE L1 438 582 -5972 877 307 94 76 chr5 1851833 1852746 -201232786 + L1MEd LINE L1 715 1644 -4910 364 285 71 57 chr5 1852744 1852892 -201232640 + L1MEd LINE L1 1566 1710 -1215 * 2624 37 3 0 chr5 1852892 1853188 -201232344 - AluY SINE Alu -14 297 1 364 285 71 57 chr5 1853188 1853423 -201232109 + L1MEd LINE L1 1710 2039 -886 2968 104 21 0 chr5 1853461 1854184 -201231348 + L1P4 LINE L1 4917 5652 -516 493 290 163 23 chr5 1854284 1854591 -201230941 + L1MEd LINE L1 3330 3679 -2885 305 296 45 62 chr5 1854611 1854787 -201230745 + L1MEd LINE L1 4521 4693 -1871 3277 57 16 11 chr5 1855541 1855983 -201229549 + MLT2A1 LTR ERVL 1 444 0 23 0 0 0 chr5 1856673 1856696 -201228836 + AT_rich Low_complexity Low_complexity 1 23 0 201 74 0 0 chr5 1859812 1859839 -201225693 + (CA)n Simple_repeat Simple_repeat 1 27 0 2145 129 7 3 chr5 1860906 1861208 -201224324 + AluSx SINE Alu 3 305 -7 2587 53 0 0 chr5 1862969 1863270 -201222262 - AluY SINE Alu -10 301 1 223 347 0 49 chr5 1863347 1863491 -201222041 + L2 LINE L2 3125 3261 -52 3557 103 2 6 chr5 1864511 1865024 -201220508 + MER9 LTR ERVK 1 511 0 2523 69 0 13 chr5 1865578 1865883 -201219649 - AluY SINE Alu -10 301 1 1351 165 116 15 chr5 1868354 1868621 -201216911 - AluJb SINE Alu -12 300 7 1642 316 88 28 chr5 1868789 1870023 -201215509 + L1MEc LINE L1 32 1340 -5056 364 245 109 27 chr5 1870074 1870221 -201215311 + L1MEc LINE L1 2723 2881 -3334 8162 38 13 0 chr5 1870980 1871974 -201213558 + LTR13 LTR ERVK 1 1007 0 192 40 0 0 chr5 1872352 1872377 -201213155 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 547 147 69 17 chr5 1872478 1872594 -201212938 + Tigger7 DNA MER2_type 2345 2466 -21 2385 78 6 34 chr5 1872637 1872958 -201212574 + AluSx SINE Alu 1 312 0 1503 204 10 19 chr5 1877026 1877340 -201208192 - AluJo SINE Alu -1 311 1 225 288 38 23 chr5 1877411 1877543 -201207989 - L1M1 LINE L1 -476 5828 5695 249 299 26 0 chr5 1878051 1878128 -201207404 + L2 LINE L2 3235 3313 0 564 343 64 20 chr5 1878673 1878924 -201206608 + MIR SINE MIR 1 262 0 25 31 0 0 chr5 1880682 1880714 -201204818 + GC_rich Low_complexity Low_complexity 1 32 0 200 35 35 0 chr5 1881655 1881684 -201203848 + (GAA)n Simple_repeat Simple_repeat 2 31 0 451 216 105 26 chr5 1882436 1882589 -201202943 + MER58C DNA MER1_type 48 212 -3 893 157 43 16 chr5 1883157 1883342 -201202190 - AluJo SINE Alu -8 304 115 418 322 65 0 chr5 1889943 1890142 -201195390 - Charlie5 DNA MER1_type -35 2577 2366 360 228 22 11 chr5 1891180 1891272 -201194260 - L1MC4a LINE L1 -1038 6770 6678 380 217 46 53 chr5 1894345 1894497 -201191035 + MER20 DNA MER1_type 6 156 -63 1086 186 85 80 chr5 1895312 1895689 -201189843 - MLT1B LTR MaLR -11 379 1 391 309 42 13 chr5 1897450 1897686 -201187846 - L1MEc LINE L1 -4590 1973 1731 2275 81 3 3 chr5 1897725 1898022 -201187510 + AluY SINE Alu 1 297 -14 502 307 49 0 chr5 1898072 1898235 -201187297 + MER58C DNA MER1_type 27 197 -18 288 281 102 15 chr5 1898251 1898454 -201187078 - L1MEc LINE L1 -4790 1592 1271 486 319 76 34 chr5 1898531 1898794 -201186738 - L1MEc LINE L1 -5250 1313 1040 426 283 104 0 chr5 1898859 1899110 -201186422 + MER33 DNA MER1_type 4 280 -44 820 170 78 0 chr5 1899111 1899264 -201186268 + AluJb SINE Alu 136 300 -12 3524 153 27 73 chr5 1899608 1900175 -201185357 - LTR39 LTR ERV1 0 783 262 1955 129 0 7 chr5 1900175 1900462 -201185070 - AluSx SINE Alu 0 312 28 3524 153 27 73 chr5 1900462 1900699 -201184833 - LTR39 LTR ERV1 -521 262 16 953 243 104 19 chr5 1903024 1903370 -201182162 + MER21B LTR ERV1 20 335 -528 4829 176 39 14 chr5 1903370 1904251 -201181281 - MER4D LTR ERV1 0 903 1 953 243 104 19 chr5 1904251 1904422 -201181110 + MER21B LTR ERV1 335 672 -191 761 247 148 3 chr5 1904541 1904824 -201180708 - MER68 LTR ERV1 -75 487 164 2003 150 145 18 chr5 1905038 1905418 -201180114 - MSTA LTR MaLR 0 428 1 7613 140 45 44 chr5 1905418 1906936 -201178596 - MSTA-int LTR MaLR 0 1580 61 403 359 122 17 chr5 1906944 1907181 -201178351 - L1MEc LINE L1 -5454 1109 848 21 36 0 0 chr5 1908924 1908952 -201176580 + AT_rich Low_complexity Low_complexity 1 28 0 517 199 140 23 chr5 1910568 1910739 -201174793 + MSTB2 LTR MaLR 229 444 -13 251 213 8 63 chr5 1912218 1912345 -201173187 + G-rich Low_complexity Low_complexity 3 122 0 * 325 291 28 22 chr5 1912286 1912465 -201173067 + (TG)n Simple_repeat Simple_repeat 1 180 0 711 264 58 55 chr5 1912515 1912863 -201172669 + MLT1A1 LTR MaLR 16 364 -1 229 134 79 8 chr5 1916277 1916404 -201169128 + (TG)n Simple_repeat Simple_repeat 1 136 0 241 120 48 60 chr5 1916442 1916609 -201168923 + (GTGTG)n Simple_repeat Simple_repeat 1 165 0 409 148 93 6 chr5 1916719 1916881 -201168651 + (TG)n Simple_repeat Simple_repeat 2 177 0 * 428 139 32 86 chr5 1916763 1917065 -201168467 + (GTGTG)n Simple_repeat Simple_repeat 1 285 0 1983 126 161 34 chr5 1917719 1918051 -201167481 + MSTA LTR MaLR 1 389 -39 2218 81 0 3 chr5 1918051 1918355 -201167177 + AluSq SINE Alu 1 303 0 1983 126 161 34 chr5 1918355 1918401 -201167131 + MSTA LTR MaLR 389 428 0 9896 133 9 41 chr5 1918403 1920033 -201165499 + MSTA-int LTR MaLR 3 1580 0 753 123 227 7 chr5 1920033 1920187 -201165345 + MSTA LTR MaLR 1 188 -240 196 141 47 12 chr5 1921743 1921828 -201163704 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 1921856 1921974 -201163558 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 309 300 80 33 chr5 1922181 1922331 -201163201 - L1MEc LINE L1 -5367 1029 873 469 283 104 0 chr5 1922396 1922647 -201162885 + MER33 DNA MER1_type 4 280 -44 862 170 78 0 chr5 1922648 1922801 -201162731 + AluJb SINE Alu 136 300 -12 2864 176 19 30 chr5 1923145 1923712 -201161820 - LTR39 LTR ERV1 0 783 223 2115 118 0 3 chr5 1923712 1924025 -201161507 - AluSx SINE Alu 0 312 1 693 194 0 0 chr5 1924765 1924925 -201160607 + (CA)n Simple_repeat Simple_repeat 1 160 0 304 212 153 0 chr5 1925536 1925621 -201159911 + L2 LINE L2 3172 3269 -3 2372 74 0 0 chr5 1925980 1926279 -201159253 - AluY SINE Alu -12 299 1 290 234 76 10 chr5 1926388 1926567 -201158965 - MSTC LTR MaLR -208 188 1 367 316 102 62 chr5 1926594 1927068 -201158464 - L1M4c LINE L1 -1202 1541 945 550 326 23 19 chr5 1927109 1927367 -201158165 - L1M4 LINE L1 -2010 4136 3878 183 243 0 0 chr5 1927466 1927503 -201158029 + MIR SINE MIR 108 144 -118 184 176 0 0 chr5 1930683 1930717 -201154815 + MIR SINE MIR 109 142 -120 505 223 196 42 chr5 1932607 1932966 -201152566 - MLT1F1 LTR MaLR -93 474 47 456 288 58 28 chr5 1933055 1933401 -201152131 - MLT1F1 LTR MaLR -166 376 27 185 319 67 8 chr5 1936809 1936928 -201148604 - MIR SINE MIR -29 233 108 1251 307 55 21 chr5 1937271 1937835 -201147697 - L1MD3 LINE L1 -8 7987 7405 1421 187 8 0 chr5 1937839 1938106 -201147426 - AluJb SINE Alu -4 308 40 1804 249 113 0 chr5 1938106 1938608 -201146924 - L1MD3 LINE L1 -736 7259 6701 24 0 0 0 chr5 1938638 1938662 -201146870 + AT_rich Low_complexity Low_complexity 1 24 0 412 362 83 24 chr5 1939018 1939441 -201146091 + L1MEd LINE L1 499 946 -5173 379 295 113 58 chr5 1939517 1939931 -201145601 + L1MEd LINE L1 960 1581 -909 394 255 13 27 chr5 1939931 1940080 -201145452 + L1MA10 LINE L1 6188 6334 0 336 345 20 34 chr5 1940094 1940242 -201145290 + L1MEc LINE L1 1034 1142 -5063 448 369 104 33 chr5 1940332 1940725 -201144807 + L1MEc LINE L1 1370 1790 -4606 1160 306 137 27 chr5 1941130 1941993 -201143539 + L1MEc LINE L1 2211 3220 -2995 2390 70 0 0 chr5 1941993 1942291 -201143241 + AluY SINE Alu 1 298 -13 1160 306 137 27 chr5 1942291 1942638 -201142894 + L1MEc LINE L1 3220 3527 -2688 * 4522 175 12 3 chr5 1942632 1943530 -201142002 + L1PA14 LINE L1 4474 5379 -767 2808 62 3 0 chr5 1943510 1943884 -201141648 + L1PA8 LINE L1 5797 6171 -1 * 5617 95 2 5 chr5 1943880 1944692 -201140840 + L1PA14 LINE L1 5352 6161 0 1525 284 123 26 chr5 1944730 1944783 -201140749 + L1MEc LINE L1 3506 3552 -2663 1965 125 0 7 chr5 1944783 1945086 -201140446 + AluSc SINE Alu 1 301 0 1525 284 123 26 chr5 1945086 1945876 -201139656 + L1MEc LINE L1 3552 4432 -1783 1796 212 73 9 chr5 1945894 1946001 -201139531 + L1M3 LINE L1 5363 5462 -721 252 0 0 0 chr5 1946001 1946029 -201139503 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1796 212 73 9 chr5 1946029 1946345 -201139187 + L1M3 LINE L1 5462 5813 -370 267 286 0 0 chr5 1946347 1946410 -201139122 + L1ME LINE L1 5748 5810 -354 270 286 0 0 chr5 1946415 1946478 -201139054 + L1ME LINE L1 5748 5810 -354 227 333 0 0 chr5 1946483 1946546 -201138986 + L1ME LINE L1 5748 5810 -354 282 286 0 0 chr5 1946551 1946614 -201138918 + L1ME LINE L1 5748 5810 -354 263 302 0 0 chr5 1946619 1946682 -201138850 + L1ME LINE L1 5745 5807 -359 306 242 0 0 chr5 1946687 1946753 -201138779 + L1M3 LINE L1 5748 5813 -370 306 242 0 0 chr5 1946755 1946821 -201138711 + L1M2 LINE L1 5748 5813 -478 279 254 0 0 chr5 1946823 1946886 -201138646 + L1M4 LINE L1 5748 5810 -368 244 302 0 0 chr5 1946891 1946954 -201138578 + L1ME LINE L1 5748 5810 -354 295 258 0 0 chr5 1946959 1947025 -201138507 + L1M2 LINE L1 5748 5813 -478 281 286 0 0 chr5 1947027 1947090 -201138442 + L1ME LINE L1 5745 5807 -359 268 286 0 0 chr5 1947163 1947226 -201138306 + L1ME LINE L1 5748 5810 -354 268 286 0 0 chr5 1947231 1947294 -201138238 + L1ME LINE L1 5748 5810 -354 268 286 0 0 chr5 1947299 1947362 -201138170 + L1ME LINE L1 5748 5810 -354 285 270 0 0 chr5 1947367 1947430 -201138102 + L1ME LINE L1 5748 5810 -354 2199 189 33 2 chr5 1947435 1947858 -201137674 + L1MB3 LINE L1 5748 6183 0 2394 256 133 5 chr5 1949026 1949773 -201135759 - L1MA4 LINE L1 0 6300 5459 672 200 0 0 chr5 1950360 1950520 -201135012 + (CA)n Simple_repeat Simple_repeat 1 160 0 302 212 153 0 chr5 1951131 1951216 -201134316 + L2 LINE L2 3172 3269 -3 842 55 47 12 chr5 1954945 1955289 -201130243 + (TG)n Simple_repeat Simple_repeat 1 356 0 327 276 108 67 chr5 1955375 1955720 -201129812 - L1ME LINE L1 -5175 1241 975 716 301 120 33 chr5 1956038 1956767 -201128765 + L1ME3A LINE L1 1020 1770 -4445 441 311 80 51 chr5 1956803 1957262 -201128270 + L1ME3A LINE L1 1819 2361 -3854 3741 108 8 4 chr5 1957262 1957771 -201127761 - MER9 LTR ERVK 0 511 1 441 311 80 51 chr5 1957771 1957843 -201127689 + L1ME3A LINE L1 2361 2429 -3786 1784 42 0 0 chr5 1958000 1958214 -201127318 - LTR14B LTR ERVK -394 214 1 987 281 75 28 chr5 1958218 1958684 -201126848 + L1ME3A LINE L1 3347 3834 -2381 * 1666 194 8 8 chr5 1958667 1959044 -201126488 + L1ME3A LINE L1 4339 4715 -1500 759 127 22 0 chr5 1959042 1959176 -201126356 - L1 LINE L1 -1369 4777 4641 * 774 184 7 15 chr5 1959176 1959425 -201126107 + GA-rich Low_complexity Low_complexity 1 247 0 669 219 97 7 chr5 1959425 1959580 -201125952 - MER93b LTR ERV1 -203 170 2 1253 302 119 11 chr5 1959631 1960194 -201125338 + L1ME3A LINE L1 5328 5951 -284 25 31 0 0 chr5 1960378 1960410 -201125122 + AT_rich Low_complexity Low_complexity 1 32 0 2122 103 3 10 chr5 1960413 1960546 -201124986 + AluY SINE Alu 1 133 -178 2045 130 0 16 chr5 1960546 1960861 -201124671 + AluSg SINE Alu 1 310 0 2122 103 3 10 chr5 1960861 1961028 -201124504 + AluY SINE Alu 133 299 -12 718 252 34 17 chr5 1961975 1962213 -201123319 + L1M4 LINE L1 2360 2601 -3545 1179 54 0 0 chr5 1962218 1962365 -201123167 + AluY SINE Alu 158 304 -7 2199 77 0 13 chr5 1962439 1962737 -201122795 - AluY SINE Alu -17 294 1 26 0 0 0 chr5 1963676 1963702 -201121830 + AT_rich Low_complexity Low_complexity 1 26 0 2485 46 10 0 chr5 1964545 1964848 -201120684 + AluY SINE Alu 1 306 -5 285 191 38 30 chr5 1965419 1965550 -201119982 + GA-rich Low_complexity Low_complexity 5 136 0 639 171 26 0 chr5 1965662 1965779 -201119753 - MER45A DNA AcHobo 0 178 59 243 293 0 13 chr5 1965858 1965933 -201119599 + (TG)n Simple_repeat Simple_repeat 1 74 0 2012 136 0 7 chr5 1967313 1967622 -201117910 + AluSx SINE Alu 1 307 -5 607 356 99 55 chr5 1967649 1968162 -201117370 + L1ME4a LINE L1 5304 5846 -275 2526 227 94 21 chr5 1968162 1968835 -201116697 + MER72 LTR ERV1 1 722 0 607 356 99 55 chr5 1968835 1968899 -201116633 + L1ME4a LINE L1 5846 5906 -215 259 221 96 19 chr5 1968926 1969030 -201116502 + L1ME4a LINE L1 6009 6120 -1 187 114 45 0 chr5 1969588 1969632 -201115900 + GA-rich Low_complexity Low_complexity 3 48 0 338 303 9 9 chr5 1971232 1971341 -201114191 + Charlie7 DNA MER1_type 335 443 -2169 2031 98 7 11 chr5 1972521 1972833 -201112699 + AluSx SINE Alu 1 311 0 2101 87 6 81 chr5 1974021 1974356 -201111176 + AluSx SINE Alu 1 310 -2 336 24 0 0 chr5 1975630 1975671 -201109861 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr5 1976319 1976342 -201109190 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 1976377 1976426 -201109106 + GC_rich Low_complexity Low_complexity 1 49 0 238 161 16 65 chr5 1977968 1978030 -201107502 + L1MB8 LINE L1 6120 6178 0 24 32 0 0 chr5 1980158 1980189 -201105343 + GC_rich Low_complexity Low_complexity 1 31 0 22 106 0 0 chr5 1980253 1980338 -201105194 + GC_rich Low_complexity Low_complexity 1 85 0 21 36 0 0 chr5 1980391 1980419 -201105113 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 1980443 1980474 -201105058 + GC_rich Low_complexity Low_complexity 1 31 0 192 40 0 0 chr5 1980517 1980542 -201104990 + (CGGG)n Simple_repeat Simple_repeat 2 26 0 27 29 0 0 chr5 1980650 1980684 -201104848 + GC_rich Low_complexity Low_complexity 1 34 0 513 244 0 0 chr5 1989385 1989545 -201095987 + (TG)n Simple_repeat Simple_repeat 1 160 0 323 333 68 93 chr5 1993889 1994303 -201091229 - HAL1 LINE L1 -1076 1431 1029 2210 110 0 0 chr5 1994303 1994612 -201090920 - AluSx SINE Alu -3 309 1 323 333 68 93 chr5 1994612 1994668 -201090864 - HAL1 LINE L1 -1478 1029 973 196 141 47 12 chr5 1997397 1997482 -201088050 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 1997510 1997628 -201087904 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 221 312 29 22 chr5 2001969 2002103 -201083429 + MIR SINE MIR 80 211 -51 212 218 18 77 chr5 2002326 2002496 -201083036 + (CCCTG)n Simple_repeat Simple_repeat 3 162 0 * 417 298 0 41 chr5 2002372 2002635 -201082897 + C-rich Low_complexity Low_complexity 1 252 0 252 274 107 20 chr5 2003327 2003524 -201082008 + MLT1D LTR MaLR 33 246 -259 414 271 80 69 chr5 2006045 2006307 -201079225 + L1ME LINE L1 674 938 -5181 186 385 33 16 chr5 2006911 2007033 -201078499 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 2009142 2009198 -201076334 + (TG)n Simple_repeat Simple_repeat 1 56 0 1909 162 14 0 chr5 2009310 2009607 -201075925 - AluSx SINE Alu -11 301 1 2283 291 78 61 chr5 2009657 2011414 -201074118 + L1ME LINE L1 3397 5183 -946 762 200 113 0 chr5 2011416 2011611 -201073921 - Tigger1 DNA MER2_type 0 2418 2202 737 180 6 25 chr5 2011592 2011753 -201073779 - Tigger1 DNA MER2_type -2255 163 6 * 532 195 144 8 chr5 2011912 2012030 -201073502 + AluJo SINE Alu 1 134 -178 1092 207 23 80 chr5 2012043 2012430 -201073102 + L1ME LINE L1 5296 5660 -489 407 296 122 38 chr5 2013142 2013464 -201072068 - L1ME LINE L1 -536 5634 5272 2190 104 3 29 chr5 2013596 2013905 -201071627 - AluY SINE Alu -5 306 6 26 0 0 0 chr5 2013913 2013939 -201071593 + AT_rich Low_complexity Low_complexity 1 26 0 * 11956 212 29 18 chr5 2013928 2014783 -201070749 - L1PB1 LINE L1 0 6867 6023 207 0 0 0 chr5 2014783 2014806 -201070726 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 1835 160 3 3 chr5 2014806 2015082 -201070450 - AluSx SINE Alu -32 280 5 11956 212 29 18 chr5 2015082 2017904 -201067628 - L1PB1 LINE L1 -844 6023 3086 6123 54 15 15 chr5 2017904 2018649 -201066883 + SVA Other Other 642 1386 0 11956 212 29 18 chr5 2018649 2020651 -201064881 - L1PB1 LINE L1 -3781 3086 1109 754 226 17 6 chr5 2020654 2020831 -201064701 - L1PB1 LINE L1 -6679 184 6 25 0 0 0 chr5 2021602 2021627 -201063905 + AT_rich Low_complexity Low_complexity 1 25 0 300 257 29 0 chr5 2021693 2021798 -201063734 + (TG)n Simple_repeat Simple_repeat 2 109 0 1464 228 3 10 chr5 2021913 2022211 -201063321 - AluJo SINE Alu -16 296 1 1307 256 57 44 chr5 2022916 2023580 -201061952 + L1ME LINE L1 4796 5479 -687 621 175 0 44 chr5 2023580 2023717 -201061815 + FLAM_C SINE Alu 3 133 0 1307 256 57 44 chr5 2023717 2023921 -201061611 + L1ME LINE L1 5479 5679 -487 2035 182 8 3 chr5 2023933 2024313 -201061219 - MLT1B LTR MaLR -8 382 1 708 209 41 0 chr5 2024688 2024860 -201060672 - L1PBa LINE L1 -6679 184 6 326 332 89 52 chr5 2025278 2025661 -201059871 - L1M4 LINE L1 -1128 5018 4622 257 275 22 0 chr5 2027299 2027390 -201058142 + (TG)n Simple_repeat Simple_repeat 2 94 0 1607 199 3 10 chr5 2027510 2027811 -201057721 - AluJo SINE Alu -13 299 1 281 263 46 72 chr5 2028533 2028685 -201056847 + L1ME LINE L1 4798 4945 -1201 195 400 9 0 chr5 2030152 2030262 -201055270 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 2030373 2030490 -201055042 + L3b LINE CR1 1455 1576 -7 2272 85 0 69 chr5 2030722 2031040 -201054492 - AluSx SINE Alu -16 296 1 950 82 48 0 chr5 2033030 2033176 -201052356 - MER41A LTR ERV1 0 554 402 32 0 0 0 chr5 2035566 2035598 -201049934 + GC_rich Low_complexity Low_complexity 1 32 0 782 265 49 48 chr5 2038956 2039332 -201046200 - MLT1B LTR MaLR -12 378 1 208 277 45 28 chr5 2043115 2043292 -201042240 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 197 290 29 0 chr5 2047632 2047701 -201037831 + MIR SINE MIR 81 151 -57 26 0 0 0 chr5 2048413 2048439 -201037093 + GC_rich Low_complexity Low_complexity 1 26 0 277 229 0 13 chr5 2048693 2048772 -201036760 + L1ME LINE L1 5606 5681 -483 830 222 28 37 chr5 2048773 2048989 -201036543 + L1ME LINE L1 5466 5679 -487 1965 183 13 3 chr5 2049001 2049379 -201036153 - MLT1B LTR MaLR -8 382 1 248 234 0 0 chr5 2050442 2050506 -201035026 + (CA)n Simple_repeat Simple_repeat 1 64 0 1726 193 30 0 chr5 2050993 2051289 -201034243 - AluJb SINE Alu -7 305 1 401 343 78 50 chr5 2051382 2051703 -201033829 - L1MC4a LINE L1 -1892 5916 5587 329 296 111 29 chr5 2051750 2051993 -201033539 - L1MC4a LINE L1 -646 5520 5258 660 313 114 65 chr5 2051997 2052655 -201032877 - L1MC4a LINE L1 -897 5249 4560 333 299 103 58 chr5 2053217 2053441 -201032091 - L1ME4a LINE L1 -22 6597 6364 767 232 22 5 chr5 2054573 2054758 -201030774 - MLT1A2 LTR MaLR 0 374 187 543 256 56 32 chr5 2054758 2055008 -201030524 - MLT1A1 LTR MaLR -91 274 19 303 28 0 0 chr5 2055322 2055358 -201030174 + (TG)n Simple_repeat Simple_repeat 2 37 0 1978 88 11 4 chr5 2055378 2055641 -201029891 + AluY SINE Alu 33 297 -14 1147 135 12 0 chr5 2055641 2055811 -201029721 + AluSg/x SINE Alu 134 305 -7 186 308 48 19 chr5 2056571 2056675 -201028857 + MIR SINE MIR 75 181 -81 955 307 102 17 chr5 2057138 2058206 -201027326 - L1ME4a LINE L1 -285 6383 5222 2284 233 29 42 chr5 2058564 2058899 -201026633 - L1ME4a LINE L1 -3939 2707 2369 1572 194 32 7 chr5 2058899 2059183 -201026349 - AluJo SINE Alu -21 291 1 2284 233 29 42 chr5 2059183 2059911 -201025621 - L1ME4a LINE L1 -4277 2369 1570 644 178 0 0 chr5 2059925 2060026 -201025506 - Tigger7 DNA MER2_type -6 2481 2381 * 1264 195 22 0 chr5 2060024 2060255 -201025277 - Tigger7 DNA MER2_type -497 236 1 2116 246 53 26 chr5 2060255 2060991 -201024541 - L1ME4a LINE L1 -4971 1571 816 2153 96 0 69 chr5 2061286 2061620 -201023912 - AluY SINE Alu 0 311 1 235 211 60 0 chr5 2062969 2063042 -201022490 - MIR SINE MIR -73 135 76 2055 181 37 37 chr5 2064836 2065268 -201020264 - MSTB1 LTR MaLR 0 432 1 2206 248 25 28 chr5 2065833 2065854 -201019678 - L1M4c LINE L1 -4237 2409 2389 1282 226 28 14 chr5 2065854 2066141 -201019391 - AluJo SINE Alu -11 291 1 2206 248 25 28 chr5 2066141 2066867 -201018665 - L1M4c LINE L1 -4257 2389 1570 637 178 0 0 chr5 2066881 2066982 -201018550 - Tigger7 DNA MER2_type -6 2485 2385 * 1276 204 4 0 chr5 2066980 2067215 -201018317 - Tigger7 DNA MER2_type -497 236 1 2129 251 47 23 chr5 2067215 2067953 -201017579 - L1M4c LINE L1 -4971 1571 816 1183 152 0 0 chr5 2068251 2068442 -201017090 - AluY SINE Alu -2 309 119 297 0 0 0 chr5 2068442 2068475 -201017057 + (T)n Simple_repeat Simple_repeat 1 33 0 1090 69 0 0 chr5 2068478 2068609 -201016923 - AluY SINE Alu -180 131 1 245 188 47 31 chr5 2069970 2070034 -201015498 - MIR SINE MIR -67 141 77 2000 188 37 37 chr5 2071829 2072261 -201013271 - MSTB1 LTR MaLR 0 432 1 975 324 100 26 chr5 2072922 2074059 -201011473 + L1MEd LINE L1 90 1253 -4866 2091 92 0 3 chr5 2074092 2074376 -201011156 - AluY SINE Alu -28 283 1 2684 167 5 16 chr5 2075692 2076123 -201009409 - MSTB LTR MaLR 0 426 1 5001 175 29 32 chr5 2076123 2077099 -201008433 - MSTB-int LTR MaLR 0 1651 679 430 217 46 53 chr5 2078181 2078333 -201007199 + MER20 DNA MER1_type 6 156 -63 8087 119 101 103 chr5 2080343 2082043 -201003489 - pTR5 LTR ERV1 0 2438 742 262 302 129 18 chr5 2082252 2082477 -201003055 - L1MC5 LINE L1 -54 7907 7658 1148 264 39 35 chr5 2082741 2082843 -201002689 - L1M4 LINE L1 -2627 3519 3419 2055 123 0 19 chr5 2082843 2083159 -201002373 - AluSg SINE Alu 0 310 1 1148 264 39 35 chr5 2083159 2083575 -201001957 - L1M4 LINE L1 -2727 3419 2999 853 264 50 48 chr5 2085671 2086047 -200999485 - MLT1B LTR MaLR -12 378 1 207 284 45 23 chr5 2089830 2090006 -200995526 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 206 290 29 0 chr5 2094286 2094355 -200991177 + MIR SINE MIR 81 151 -57 279 264 0 66 chr5 2094656 2094777 -200990755 + C-rich Low_complexity Low_complexity 4 116 0 363 246 29 51 chr5 2094796 2094971 -200990561 + C-rich Low_complexity Low_complexity 5 175 0 338 274 102 15 chr5 2095654 2095851 -200989681 + MLT1D LTR MaLR 33 246 -259 357 298 78 67 chr5 2097997 2098252 -200987280 + L1ME LINE L1 674 931 -5188 182 385 33 16 chr5 2098864 2098986 -200986546 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 2101185 2101241 -200984291 + (TG)n Simple_repeat Simple_repeat 1 56 0 1848 166 13 0 chr5 2101353 2101654 -200983878 - AluSx SINE Alu -7 305 1 2638 291 77 61 chr5 2101704 2103463 -200982069 + L1ME LINE L1 3397 5183 -946 827 203 102 0 chr5 2103465 2103662 -200981870 - Tigger1 DNA MER2_type 0 2418 2202 776 183 14 0 chr5 2103660 2103802 -200981730 - Tigger1 DNA MER2_type -2269 149 6 * 204 146 24 0 chr5 2103900 2103941 -200981591 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 518 188 145 8 chr5 2103966 2104083 -200981449 + AluJo SINE Alu 2 134 -178 1197 229 27 53 chr5 2104096 2104471 -200981061 + L1ME LINE L1 5296 5660 -489 2003 100 7 32 chr5 2105633 2105942 -200979590 - AluY SINE Alu -5 306 6 11765 182 30 15 chr5 2105965 2106823 -200978709 - L1PB1 LINE L1 0 6867 6023 1705 163 4 3 chr5 2106823 2107126 -200978406 - AluSx SINE Alu -32 280 5 11765 182 30 15 chr5 2107126 2111922 -200973610 - L1PB1 LINE L1 -844 6023 1109 822 220 11 0 chr5 2111925 2112102 -200973430 - L1PB1 LINE L1 -6679 184 6 279 273 31 8 chr5 2112933 2113061 -200972471 + (TG)n Simple_repeat Simple_repeat 2 132 0 1308 214 0 84 chr5 2113176 2113499 -200972033 - AluJo SINE Alu -6 296 1 1317 262 56 43 chr5 2114204 2114866 -200970666 + L1ME LINE L1 4798 5479 -687 675 175 0 44 chr5 2114866 2115003 -200970529 + FLAM_C SINE Alu 3 133 0 1317 262 56 43 chr5 2115003 2115207 -200970325 + L1ME LINE L1 5479 5679 -487 2089 186 10 5 chr5 2115211 2115599 -200969933 - MLT1B LTR MaLR 0 390 1 234 250 0 0 chr5 2116664 2116728 -200968804 + (CA)n Simple_repeat Simple_repeat 1 64 0 1544 198 31 0 chr5 2117217 2117505 -200968027 - AluJb SINE Alu -15 297 1 233 330 28 50 chr5 2117616 2117834 -200967698 - L1MC/D LINE L1 -1911 5897 5685 344 296 111 29 chr5 2117966 2118209 -200967323 - L1MC/D LINE L1 -646 5520 5258 619 342 117 38 chr5 2118213 2118769 -200966763 - L1MC/D LINE L1 -897 5249 4650 2588 157 7 25 chr5 2120121 2120555 -200964977 - MSTB LTR MaLR 0 426 1 8003 180 20 10 chr5 2120555 2121979 -200963553 - MSTB-int LTR MaLR 0 1651 214 1611 148 120 68 chr5 2121979 2122405 -200963127 - LTR7 LTR ERV1 -2 448 1 2447 100 45 35 chr5 2122405 2123000 -200962532 - HERVH LTR ERV1 0 7713 5600 1283 176 60 0 chr5 2123001 2123234 -200962298 - HERVH LTR ERV1 -2564 5149 4903 5840 174 15 1 chr5 2123336 2124338 -200961194 - MSTA-int LTR MaLR -635 1016 1 310 200 15 0 chr5 2124338 2124403 -200961129 - MSTA LTR MaLR 0 428 363 278 279 97 45 chr5 2124501 2124748 -200960784 + L1MEc LINE L1 1442 1701 -4695 453 321 79 54 chr5 2124781 2125061 -200960471 + L1MEc LINE L1 2544 2830 -3385 1070 251 29 57 chr5 2125075 2125586 -200959946 - L1MEc LINE L1 -4897 1499 1003 513 239 65 0 chr5 2125646 2125801 -200959731 - L1MEc LINE L1 -5497 899 735 301 269 97 37 chr5 2125802 2125936 -200959596 + L1MEc LINE L1 1314 1455 -4941 4835 172 62 2 chr5 2125972 2127775 -200957757 - L1PB4 LINE L1 -7 6149 4245 1960 144 32 32 chr5 2127775 2128121 -200957411 + THE1B LTR MaLR 1 346 -18 3742 169 35 1 chr5 2128126 2128835 -200956697 - L1PB4 LINE L1 -1897 4249 3517 213 222 0 0 chr5 2129459 2129522 -200956010 + (CA)n Simple_repeat Simple_repeat 2 64 0 798 318 97 17 chr5 2130264 2131128 -200954404 - L1ME3A LINE L1 -219 6345 5426 506 275 148 41 chr5 2131486 2131670 -200953862 - MLT1C LTR MaLR -47 420 257 925 265 132 9 chr5 2131670 2131995 -200953537 - MLT1A1 LTR MaLR 0 365 1 506 275 148 41 chr5 2131995 2132148 -200953384 - MLT1C LTR MaLR -210 257 47 290 181 166 111 chr5 2136073 2136398 -200949134 + L1M3e LINE L1 1430 1772 -5258 392 238 8 0 chr5 2145669 2145795 -200939737 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 373 260 6 6 chr5 2146742 2146919 -200938613 + (TG)n Simple_repeat Simple_repeat 1 177 0 289 264 0 0 chr5 2146934 2147055 -200938477 + (TG)n Simple_repeat Simple_repeat 1 121 0 383 292 136 30 chr5 2149275 2149511 -200936021 + L1M4 LINE L1 2 262 -6280 1423 263 114 8 chr5 2149584 2150112 -200935420 + L1M4 LINE L1 3754 4337 -2307 441 276 47 75 chr5 2150642 2150856 -200934676 + L1M4 LINE L1 5604 5811 -833 367 286 7 21 chr5 2150959 2151099 -200934433 - L1ME3A LINE L1 -1447 5093 4956 262 322 52 2 chr5 2151099 2151264 -200934268 + L1M4 LINE L1 1720 2329 -4316 336 216 45 23 chr5 2153135 2153223 -200932309 - MER91C DNA MER1_type -19 121 32 279 247 32 21 chr5 2154319 2154412 -200931120 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 194 303 139 41 chr5 2154395 2154517 -200931015 - L2 LINE L2 0 3313 3180 * 246 250 147 26 chr5 2154644 2154760 -200930772 - L2 LINE L2 -277 3036 2907 208 301 108 0 chr5 2154902 2154995 -200930537 - L2 LINE L2 -738 2576 2474 294 190 51 0 chr5 2155383 2155462 -200930070 - LTR50 LTR ERVL -2 793 711 256 175 16 0 chr5 2155586 2155649 -200929883 - LTR50 LTR ERVL -277 518 455 316 292 10 36 chr5 2155776 2156084 -200929448 - L1MCa LINE L1 -4727 1699 1400 * 3811 115 52 7 chr5 2156062 2157190 -200928342 - L1PBa LINE L1 -4940 1923 595 236 219 14 55 chr5 2157622 2157695 -200927837 - L1MCa LINE L1 -5954 898 829 2172 118 7 0 chr5 2157779 2158084 -200927448 + AluSx SINE Alu 1 307 -5 722 294 106 6 chr5 2158645 2158975 -200926557 - MLT1C LTR MaLR 0 467 105 2646 260 87 42 chr5 2159076 2160716 -200924816 - L1ME3A LINE L1 -1842 4698 2945 1034 198 142 20 chr5 2160716 2161060 -200924472 + MLT1B LTR MaLR 1 386 -4 1043 293 70 15 chr5 2161064 2161825 -200923707 - L1MDa LINE L1 -3591 2949 2149 234 258 174 23 chr5 2163086 2163218 -200922314 - L2 LINE L2 -158 3114 2963 227 229 71 64 chr5 2164104 2164244 -200921288 + HAL1b LINE L1 1195 1335 -13 2359 84 0 0 chr5 2164285 2164583 -200920949 + AluY SINE Alu 1 298 -13 468 255 20 7 chr5 2164591 2164744 -200920788 + L1MEc LINE L1 37 191 -6205 778 205 80 0 chr5 2164788 2165012 -200920520 + L1MEc LINE L1 1895 2136 -4260 2008 125 17 0 chr5 2165714 2166001 -200919531 + AluSq SINE Alu 4 295 -18 4422 115 63 9 chr5 2166083 2166736 -200918796 - LTR12 LTR ERV1 0 688 1 603 195 13 6 chr5 2167649 2167808 -200917724 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 254 250 0 0 chr5 2169246 2169298 -200916234 + LTR30 LTR ERV1 1 52 -670 1067 130 140 23 chr5 2169298 2169552 -200915980 + LTR12 LTR ERV1 55 2032 -406 280 227 0 0 chr5 2169553 2169628 -200915904 + LTR30 LTR ERV1 553 627 -95 742 112 26 0 chr5 2169628 2169744 -200915788 + LTR12 LTR ERV1 362 480 -234 387 335 94 12 chr5 2173994 2174164 -200911368 + L1MC4 LINE L1 6459 6642 -1400 862 261 109 7 chr5 2174171 2174474 -200911058 - MER2 DNA MER2_type -8 337 4 653 251 32 58 chr5 2174974 2175070 -200910462 + L1MEc LINE L1 2125 2222 -4174 2262 100 0 3 chr5 2175070 2175369 -200910163 - AluSx SINE Alu -14 298 1 653 251 32 58 chr5 2175369 2175614 -200909918 + L1MEc LINE L1 2222 2457 -3939 * 1309 223 45 16 chr5 2175611 2176038 -200909494 + L1ME1 LINE L1 5723 6161 -5 2033 140 3 9 chr5 2176224 2176539 -200908993 + AluSq SINE Alu 1 313 0 29 60 0 0 chr5 2179456 2179506 -200906026 + GC_rich Low_complexity Low_complexity 1 50 0 22 99 0 0 chr5 2179673 2179744 -200905788 + GC_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 2179969 2179990 -200905542 + GC_rich Low_complexity Low_complexity 1 21 0 2199 68 72 0 chr5 2181215 2181507 -200904025 - AluSp SINE Alu 0 313 1 254 234 54 72 chr5 2185793 2185904 -200899628 + L2 LINE L2 3205 3313 0 1026 135 3 22 chr5 2185907 2186274 -200899258 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 891 187 5 18 chr5 2186286 2186725 -200898807 + (TGGA)n Simple_repeat Simple_repeat 1 433 0 290 336 0 10 chr5 2186825 2186929 -200898603 + (TGGG)n Simple_repeat Simple_repeat 1 103 0 387 312 89 7 chr5 2186931 2187115 -200898417 + MIR SINE MIR 3 200 -62 929 222 0 0 chr5 2187408 2187584 -200897948 + AluJb SINE Alu 136 311 -1 450 214 21 7 chr5 2187598 2187738 -200897794 + GA-rich Low_complexity Low_complexity 1 142 0 562 161 193 6 chr5 2188820 2188981 -200896551 - L1MC2 LINE L1 0 6344 6154 186 276 60 75 chr5 2189630 2189764 -200895768 + L3 LINE CR1 517 648 -929 1123 250 118 53 chr5 2190806 2191314 -200894218 - MLT1F LTR MaLR 0 542 2 2785 100 11 0 chr5 2191345 2191716 -200893816 - THE1C LTR MaLR 0 375 1 272 361 53 34 chr5 2191727 2191945 -200893587 - MIR3 SINE MIR -10 252 30 28 0 0 0 chr5 2192603 2192631 -200892901 + GC_rich Low_complexity Low_complexity 1 28 0 202 213 38 50 chr5 2192689 2192769 -200892763 + (CCCCG)n Simple_repeat Simple_repeat 1 79 0 841 156 13 26 chr5 2192956 2193110 -200892422 + AluJo SINE Alu 30 181 -131 321 304 14 16 chr5 2193390 2193557 -200891975 + L1M4 LINE L1 4260 4424 -1722 1138 248 42 121 chr5 2193580 2194456 -200891076 - L1M4 LINE L1 -2585 3561 2755 230 279 243 29 chr5 2199116 2199252 -200886280 - MIR3 SINE MIR -26 182 18 197 211 19 0 chr5 2199886 2199938 -200885594 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 2208 92 0 3 chr5 2200276 2200569 -200884963 + AluSc SINE Alu 1 292 -17 1906 154 0 22 chr5 2200578 2200897 -200884635 + AluJb SINE Alu 1 312 0 238 297 55 0 chr5 2202061 2202152 -200883380 + MER5A DNA MER1_type 14 109 -80 1983 96 17 7 chr5 2203878 2204171 -200881361 + AluY SINE Alu 1 296 -15 265 208 49 87 chr5 2205497 2205680 -200879852 + (CATCC)n Simple_repeat Simple_repeat 1 176 0 320 291 36 0 chr5 2209736 2209846 -200875686 + MIR SINE MIR 38 151 -111 180 111 0 0 chr5 2211032 2211059 -200874473 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 37 0 0 chr5 2214282 2214309 -200871223 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 347 250 56 12 chr5 2215732 2215912 -200869620 + L1MCa LINE L1 1690 1969 -4564 1604 88 22 9 chr5 2215971 2216198 -200869334 - MER30 DNA MER1_type 0 230 1 207 0 0 0 chr5 2216987 2217010 -200868522 + (CAA)n Simple_repeat Simple_repeat 2 24 0 241 202 147 9 chr5 2217551 2217660 -200867872 - L1MB8 LINE L1 -77 6101 5978 317 309 47 0 chr5 2218520 2218669 -200866863 + L1ME LINE L1 167 322 -5883 254 296 142 12 chr5 2219073 2219242 -200866290 + L1ME LINE L1 810 1000 -5396 541 231 54 51 chr5 2219411 2219671 -200865861 + MER4C LTR ERV1 275 683 -16 694 230 32 8 chr5 2219713 2219965 -200865567 + L1ME LINE L1 2788 3045 -3170 1739 133 158 142 chr5 2219965 2220689 -200864843 - LTR12 LTR ERV1 -133 2017 54 261 176 20 0 chr5 2220689 2220740 -200864792 - LTR30 LTR ERV1 -670 52 1 3492 257 79 19 chr5 2220741 2222284 -200863248 + L1ME LINE L1 3043 4677 -1538 279 304 0 10 chr5 2222464 2222566 -200862966 - MIR SINE MIR -72 136 36 4720 166 41 8 chr5 2224515 2225311 -200860221 - L1PA16 LINE L1 -9 6157 5298 2341 63 0 7 chr5 2225311 2225611 -200859921 - AluY SINE Alu -13 298 1 4720 166 41 8 chr5 2225611 2226124 -200859408 - L1PA16 LINE L1 -868 5298 4803 297 226 0 0 chr5 2227958 2228020 -200857512 - MLT1D LTR MaLR 0 505 444 245 195 57 98 chr5 2228137 2228260 -200857272 - MLT1D LTR MaLR -293 212 95 222 275 71 58 chr5 2229661 2229804 -200855728 - MIR SINE MIR -67 141 17 1068 178 32 9 chr5 2230372 2230591 -200854941 - MSTB LTR MaLR 0 426 203 1073 143 56 79 chr5 2230956 2231037 -200854495 - MSTB LTR MaLR -165 261 180 2251 99 0 10 chr5 2231037 2231339 -200854193 - AluSx SINE Alu -13 299 1 1073 143 56 79 chr5 2231339 2231523 -200854009 - MSTB LTR MaLR -246 180 2 384 271 6 41 chr5 2233188 2233358 -200852174 + (TG)n Simple_repeat Simple_repeat 1 164 0 298 224 40 0 chr5 2234138 2234214 -200851318 + G-rich Low_complexity Low_complexity 3 81 0 1736 229 53 28 chr5 2239317 2239846 -200845686 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 2239914 2239998 -200845534 + L1ME LINE L1 5340 5428 -807 237 274 27 0 chr5 2240142 2240215 -200845317 + L1ME LINE L1 5451 5525 -714 818 179 87 6 chr5 2242025 2242198 -200843334 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 2243938 2244093 -200841439 + MLT1E LTR MaLR 398 576 -17 1470 123 4 48 chr5 2245333 2245601 -200839931 - HERVH LTR ERV1 -2970 4743 4488 3028 116 6 2 chr5 2245603 2246095 -200839437 - HERVH LTR ERV1 -3720 3993 3500 715 182 20 0 chr5 2246094 2246242 -200839290 - HERVH LTR ERV1 -4423 3290 3140 * 14661 113 25 23 chr5 2246236 2249523 -200836009 - HERVH LTR ERV1 -4726 2987 1 1621 144 114 74 chr5 2249525 2249956 -200835576 - LTR7 LTR ERV1 -2 448 1 1161 157 19 0 chr5 2249956 2250172 -200835360 - MSTA-int LTR MaLR -1431 220 1 289 114 0 0 chr5 2250181 2250225 -200835307 - MSTA LTR MaLR -9 419 376 635 320 59 69 chr5 2250227 2250618 -200834914 + L1MDa LINE L1 1600 1986 -4554 834 152 26 26 chr5 2250762 2250993 -200834539 - HERVH LTR ERV1 -7481 232 2 1568 146 114 74 chr5 2250997 2251428 -200834104 - LTR7 LTR ERV1 -2 448 1 1161 157 19 0 chr5 2251428 2251644 -200833888 - MSTA-int LTR MaLR -1431 220 1 270 122 0 0 chr5 2251653 2251694 -200833838 - MSTA LTR MaLR -9 419 379 771 335 83 76 chr5 2251698 2252405 -200833127 + L1MDa LINE L1 1600 3166 -3374 984 236 31 64 chr5 2252409 2252922 -200832610 - L1MEc LINE L1 -4899 1497 1002 462 235 85 0 chr5 2252980 2253133 -200832399 - L1MEc LINE L1 -5496 900 735 4463 172 56 2 chr5 2253304 2255120 -200830412 - L1PB4 LINE L1 -7 6149 4246 1797 147 32 32 chr5 2255121 2255467 -200830065 + THE1B LTR MaLR 1 346 -18 3538 169 35 1 chr5 2255472 2256181 -200829351 - L1PB4 LINE L1 -1897 4249 3517 414 296 0 0 chr5 2256842 2257182 -200828350 + (CA)n Simple_repeat Simple_repeat 1 340 0 427 245 49 120 chr5 2258019 2258409 -200827123 + MLT1C LTR MaLR 15 383 -7 192 61 20 61 chr5 2260428 2260477 -200825055 + (CGGGG)n Simple_repeat Simple_repeat 3 49 0 25 31 0 0 chr5 2260585 2260617 -200824915 + GC_rich Low_complexity Low_complexity 1 32 0 708 309 102 16 chr5 2264879 2265534 -200819998 - L1ME LINE L1 -427 5737 5032 308 280 197 21 chr5 2265892 2266077 -200819455 - MLT1C LTR MaLR -47 420 269 1006 259 132 9 chr5 2266077 2266402 -200819130 - MLT1A1 LTR MaLR 0 365 1 308 280 197 21 chr5 2266402 2266571 -200818961 - MLT1C LTR MaLR -198 269 25 535 245 62 26 chr5 2267154 2267427 -200818105 + pTR5 LTR ERV1 1060 1342 -1096 3074 135 77 151 chr5 2267441 2268183 -200817349 + LTR12 LTR ERV1 2 688 0 316 325 129 35 chr5 2272563 2272849 -200812683 - HAL1 LINE L1 -720 1787 1475 190 366 138 0 chr5 2273064 2273187 -200812345 + L2 LINE L2 3098 3237 -76 305 278 0 22 chr5 2276077 2276348 -200809184 + (TG)n Simple_repeat Simple_repeat 1 265 0 232 260 23 79 chr5 2277579 2277756 -200807776 + (CACCG)n Simple_repeat Simple_repeat 3 169 0 371 338 134 13 chr5 2284177 2284491 -200801041 - L1ME LINE L1 -411 5755 5404 1631 266 90 26 chr5 2285146 2285864 -200799668 - L1ME LINE L1 -756 5390 4661 214 260 26 13 chr5 2287008 2287085 -200798447 + G-rich Low_complexity Low_complexity 4 81 0 225 0 0 0 chr5 2292742 2292767 -200792765 + (TA)n Simple_repeat Simple_repeat 1 25 0 279 283 81 0 chr5 2293426 2293574 -200791958 + L1MDa LINE L1 1841 2040 -4548 341 316 95 49 chr5 2293884 2294004 -200791528 + L1MDa LINE L1 1094 1207 -5323 2634 39 0 3 chr5 2294004 2294316 -200791216 + AluY SINE Alu 1 311 0 341 316 95 49 chr5 2294316 2294499 -200791033 + L1MDa LINE L1 1207 1411 -5119 281 294 9 0 chr5 2294918 2295027 -200790505 + L1MDa LINE L1 3755 3864 -2676 339 340 14 0 chr5 2295406 2295547 -200789985 + L1MDa LINE L1 3892 4034 -2506 475 313 37 0 chr5 2295649 2295783 -200789749 - MIR SINE MIR -12 250 112 1080 270 111 39 chr5 2295813 2296706 -200788826 + L1MDa LINE L1 4124 5080 -1460 721 301 78 19 chr5 2296807 2297279 -200788253 + L1MDa LINE L1 5295 5794 -746 378 306 39 63 chr5 2297545 2297599 -200787933 + L1M4c LINE L1 998 1052 -5332 2106 114 10 0 chr5 2297599 2297896 -200787636 - AluSx SINE Alu -12 300 1 378 306 39 63 chr5 2297896 2298256 -200787276 + L1M4c LINE L1 1052 1402 -4982 306 87 0 0 chr5 2298496 2298542 -200786990 + (CA)n Simple_repeat Simple_repeat 1 46 0 438 224 5 68 chr5 2298564 2298756 -200786776 + (CA)n Simple_repeat Simple_repeat 1 180 0 254 114 114 36 chr5 2298676 2298843 -200786689 + (CACAG)n Simple_repeat Simple_repeat 1 180 0 * 394 139 0 64 chr5 2298847 2299020 -200786512 + (CA)n Simple_repeat Simple_repeat 1 162 0 397 320 106 69 chr5 2299757 2300266 -200785266 - L1M4 LINE L1 -2786 3360 2833 1736 229 53 28 chr5 2305406 2305935 -200779597 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 2306003 2306087 -200779445 + L1ME LINE L1 5271 5359 -807 237 274 27 0 chr5 2306231 2306304 -200779228 + L1ME LINE L1 5382 5456 -708 818 179 87 6 chr5 2308118 2308291 -200777241 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 2310182 2310337 -200775195 + MLT1E LTR MaLR 398 576 -17 182 244 0 26 chr5 2313920 2313998 -200771534 + (CATA)n Simple_repeat Simple_repeat 3 78 0 2138 129 3 0 chr5 2314503 2314814 -200770718 - AluSx SINE Alu 0 312 1 397 279 41 0 chr5 2315225 2315372 -200770160 + MSTD LTR MaLR 1 153 -243 908 192 60 34 chr5 2315513 2315747 -200769785 + MSTD LTR MaLR 157 396 0 1269 123 5 0 chr5 2316271 2316458 -200769074 + AluSg/x SINE Alu 124 311 -1 475 254 58 5 chr5 2316466 2316655 -200768877 + L1M4 LINE L1 5132 5330 -816 343 288 136 30 chr5 2322163 2322399 -200763133 + L1M4 LINE L1 2 262 -6280 2407 276 83 17 chr5 2322468 2322997 -200762535 + L1M4 LINE L1 3754 4247 -2397 1627 168 24 30 chr5 2322997 2323295 -200762237 - AluJo SINE Alu -16 296 1 2407 276 83 17 chr5 2323295 2323752 -200761780 + L1M4 LINE L1 4247 4805 -1839 760 199 39 57 chr5 2323787 2324112 -200761420 + MLT1B LTR MaLR 21 337 -130 310 297 119 0 chr5 2324331 2324449 -200761083 + MER58B DNA MER1_type 210 341 0 2070 131 0 0 chr5 2327758 2328055 -200757477 + AluSx SINE Alu 1 297 -15 266 298 92 0 chr5 2328663 2328794 -200756738 - MIR SINE MIR -10 252 110 219 231 87 10 chr5 2329231 2329335 -200756197 - MIR SINE MIR -132 130 19 337 318 67 6 chr5 2329988 2330134 -200755398 - MIR SINE MIR -4 258 105 2146 175 107 5 chr5 2330935 2331375 -200754157 + MER31A LTR ERV1 1 485 0 1142 144 0 0 chr5 2331941 2332114 -200753418 - AluSg/x SINE Alu -6 304 132 677 87 77 29 chr5 2332332 2332436 -200753096 - AluSq/x SINE Alu -204 109 1 621 255 84 56 chr5 2332475 2332832 -200752700 + L1MDa LINE L1 20 386 -6154 196 77 51 0 chr5 2332869 2332908 -200752624 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 0 0 0 chr5 2332999 2333036 -200752496 + (CA)n Simple_repeat Simple_repeat 1 37 0 1703 232 92 20 chr5 2333232 2334402 -200751130 + L1MDa LINE L1 1014 2098 -4442 2116 115 13 0 chr5 2334402 2334706 -200750826 + AluSq SINE Alu 3 310 -3 1703 232 92 20 chr5 2334706 2335172 -200750360 + L1MDa LINE L1 2098 3290 -3250 1094 74 0 4 chr5 2335172 2335387 -200750145 + AluY SINE Alu 1 302 -9 1143 223 67 5 chr5 2335389 2335779 -200749753 + L1MDa LINE L1 3282 3695 -2845 2027 191 57 17 chr5 2335784 2336164 -200749368 + LTR26 LTR ERV1 9 452 -151 2186 86 17 7 chr5 2336164 2336454 -200749078 + AluSx SINE Alu 1 293 -19 2027 191 57 17 chr5 2336454 2336613 -200748919 + LTR26 LTR ERV1 452 603 0 456 332 58 8 chr5 2336626 2337006 -200748526 + L1MDa LINE L1 3715 4113 -2427 207 273 23 30 chr5 2338870 2339002 -200746530 + (TG)n Simple_repeat Simple_repeat 1 131 0 754 167 8 8 chr5 2542637 2542763 -200542769 + MER49 LTR ERV1 10 135 -788 1516 194 77 119 chr5 2542763 2543344 -200542188 - LTR1B LTR ERV1 0 826 284 249 278 159 20 chr5 2546372 2546523 -200539009 - LTR16B LTR ERVL -4 460 289 603 229 13 0 chr5 2546531 2546769 -200538763 + GA-rich Low_complexity Low_complexity 1 241 0 250 318 122 0 chr5 2547525 2547632 -200537900 + L2 LINE L2 3153 3272 0 580 318 66 3 chr5 2548131 2548417 -200537115 + L1ME3A LINE L1 5548 5851 -319 331 295 0 0 chr5 2549699 2549794 -200535738 + (CA)n Simple_repeat Simple_repeat 2 96 0 411 261 0 0 chr5 2550990 2551401 -200534131 + (TG)n Simple_repeat Simple_repeat 1 411 0 237 237 136 0 chr5 2552175 2552234 -200533298 + L2 LINE L2 3204 3270 -2 196 188 31 0 chr5 2553666 2553730 -200531802 + (TG)n Simple_repeat Simple_repeat 1 66 0 1211 265 131 23 chr5 2554052 2554479 -200531053 + MLT1E LTR MaLR 121 593 0 2070 120 0 3 chr5 2554690 2554998 -200530534 + AluSq SINE Alu 1 307 -6 628 174 14 28 chr5 2555175 2555488 -200530044 + GA-rich Low_complexity Low_complexity 1 308 0 2715 171 37 70 chr5 2556457 2557325 -200528207 - L1MCa LINE L1 -3981 2445 1332 3209 64 5 0 chr5 2557350 2557758 -200527774 - L1PA7 LINE L1 -4 6150 5741 437 311 14 0 chr5 2557819 2557967 -200527565 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2557973 2558262 -200527270 + AluSc SINE Alu 1 296 -13 2339 123 2 73 chr5 2558723 2559121 -200526411 - L1PA13 LINE L1 -289 5874 5505 1337 148 3 67 chr5 2559763 2560094 -200525438 - AluSx SINE Alu 0 312 3 345 251 11 11 chr5 2561083 2561262 -200524270 + (CA)n Simple_repeat Simple_repeat 1 179 0 340 366 6 0 chr5 2561335 2561551 -200523981 + (CA)n Simple_repeat Simple_repeat 1 217 0 2259 84 3 0 chr5 2561853 2562150 -200523382 + AluSp SINE Alu 1 298 -15 266 268 14 0 chr5 2562151 2562222 -200523310 - MER53 DNA DNA -117 72 1 1546 228 56 18 chr5 2562387 2562834 -200522698 - MLT1C LTR MaLR 0 467 4 2202 93 6 10 chr5 2563637 2563949 -200521583 + AluY SINE Alu 1 311 0 183 204 0 0 chr5 2565808 2565852 -200519680 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 277 59 10 chr5 2565913 2566014 -200519518 + MER88 LTR ERVL 79 184 -280 * 257 337 24 12 chr5 2565925 2566094 -200519438 - MER74B LTR ERVL -74 548 378 236 254 17 0 chr5 2566108 2566167 -200519365 - MER74A LTR ERVL -293 265 206 394 203 0 0 chr5 2566395 2566469 -200519063 + AluJ SINE Alu 49 122 -180 258 171 26 13 chr5 2566469 2566545 -200518987 + (TA)n Simple_repeat Simple_repeat 1 77 0 831 199 0 17 chr5 2566546 2566722 -200518810 + AluJ SINE Alu 125 297 -15 373 365 15 0 chr5 2567655 2567813 -200517719 - MIR SINE MIR -62 146 15 395 345 40 17 chr5 2568022 2568196 -200517336 + MER5B DNA MER1_type 1 178 0 23 78 0 0 chr5 2569997 2570048 -200515484 + AT_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr5 2570456 2570492 -200515040 + AT_rich Low_complexity Low_complexity 1 36 0 1733 160 17 3 chr5 2570763 2571057 -200514475 - AluJb SINE Alu -14 298 1 1846 114 66 79 chr5 2571940 2572318 -200513214 - THE1C LTR MaLR -2 373 1 1341 215 48 100 chr5 2572957 2573436 -200512096 + MLT1C LTR MaLR 6 459 -8 1206 174 4 17 chr5 2575523 2575764 -200509768 - L1MA3 LINE L1 0 6305 6068 285 350 17 8 chr5 2576548 2576665 -200508867 - MIR3 SINE MIR -53 155 38 245 73 0 24 chr5 2576774 2576815 -200508717 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 10103 29 2 0 chr5 2576815 2578746 -200506786 - L1PA3 LINE L1 -24 6131 4199 438 259 51 0 chr5 2581509 2581667 -200503865 - L1M4 LINE L1 -1638 4508 4343 1286 307 77 10 chr5 2582444 2583147 -200502385 + L1M4 LINE L1 3104 3853 -2293 892 185 70 182 chr5 2583147 2583902 -200501630 + MER4A LTR ERV1 1 870 -2 6174 183 25 70 chr5 2583929 2584810 -200500722 + L1MC1 LINE L1 1 920 -5506 258 32 0 0 chr5 2584810 2584841 -200500691 + (CA)n Simple_repeat Simple_repeat 2 32 0 6174 183 25 70 chr5 2584841 2585315 -200500217 + L1MC1 LINE L1 920 1286 -5140 6898 62 9 2 chr5 2585315 2586481 -200499051 + L1PA7 LINE L1 4979 6150 -4 6174 183 25 70 chr5 2586481 2586611 -200498921 + L1MC1 LINE L1 1286 1420 -5006 5036 227 85 42 chr5 2586596 2587394 -200498138 + L1MC1 LINE L1 1685 2446 -3980 * 291 154 19 0 chr5 2587394 2587446 -200498086 + LTR23 LTR ERV1 306 358 -79 5036 227 85 42 chr5 2587446 2589476 -200496056 + L1MC1 LINE L1 2446 4685 -1741 1738 199 55 19 chr5 2589485 2589902 -200495630 + MSTB1 LTR MaLR 1 432 0 2263 66 3 7 chr5 2589931 2590233 -200495299 + AluY SINE Alu 1 301 -10 388 219 0 0 chr5 2590240 2590304 -200495228 + MLT1D LTR MaLR 125 188 -317 4635 156 66 7 chr5 2590349 2591187 -200494345 + ERVL-B3 LTR ERVL 4871 5757 -7 1784 200 15 151 chr5 2591187 2591800 -200493732 + MLT2B3 LTR ERVL 1 408 -36 4644 197 79 14 chr5 2591800 2592607 -200492925 + L1MC1 LINE L1 4877 5631 -982 2003 124 48 0 chr5 2592607 2592897 -200492635 + AluSq SINE Alu 1 304 -9 4644 197 79 14 chr5 2592897 2593712 -200491820 + L1MC1 LINE L1 5631 6602 -11 554 255 136 53 chr5 2593716 2594034 -200491498 + L1M4 LINE L1 4067 4441 -1705 2272 89 0 0 chr5 2594034 2594340 -200491192 + AluY SINE Alu 1 306 0 554 255 136 53 chr5 2594340 2594506 -200491026 + L1M4 LINE L1 4441 4592 -1554 1441 76 0 0 chr5 2594893 2595065 -200490467 + AluSg/x SINE Alu 124 295 -17 249 262 16 0 chr5 2595505 2595566 -200489966 + MER45 DNA AcHobo 61 122 -56 942 185 75 5 chr5 2600471 2600671 -200484861 + L1MA4A LINE L1 5555 5768 -535 231 164 0 0 chr5 2600671 2600726 -200484806 - LTR66 LTR ERVL -162 448 394 551 131 0 4 chr5 2600768 2600869 -200484663 - L1MC/D LINE L1 -560 5682 5585 289 0 49 0 chr5 2600874 2600915 -200484617 + (TA)n Simple_repeat Simple_repeat 2 44 0 2266 156 78 11 chr5 2600916 2601390 -200484142 + L1MA4A LINE L1 5795 6300 -3 197 279 114 13 chr5 2602626 2602705 -200482827 + L2 LINE L2 3208 3294 -19 2023 122 3 20 chr5 2604061 2604356 -200481176 - AluSx SINE Alu 0 312 23 366 362 7 7 chr5 2604411 2604549 -200480983 + MER5B DNA MER1_type 35 172 -6 203 322 67 0 chr5 2609716 2609806 -200475726 + L2 LINE L2 3172 3267 -5 182 367 20 10 chr5 2609877 2609975 -200475557 - MIR SINE MIR -6 256 158 243 0 0 0 chr5 2610319 2610346 -200475186 + (TA)n Simple_repeat Simple_repeat 2 28 0 2268 65 65 0 chr5 2611988 2612280 -200473252 + AluY SINE Alu 1 311 0 193 311 77 46 chr5 2614039 2614235 -200471297 - L2 LINE L2 -490 2824 2623 429 343 50 15 chr5 2615283 2615624 -200469908 - HERV16 LTR ERVL -1217 4547 4195 697 294 81 15 chr5 2616290 2616623 -200468909 - HERV16 LTR ERVL -3845 1151 797 216 260 0 0 chr5 2616635 2616685 -200468847 + (TG)n Simple_repeat Simple_repeat 2 51 0 3064 145 19 6 chr5 2617939 2618464 -200467068 - L1MA2 LINE L1 0 6304 5773 1376 241 20 0 chr5 2619573 2619921 -200465611 - MLT1A1 LTR MaLR -2 363 9 2350 110 3 0 chr5 2619955 2620256 -200465276 + AluSp SINE Alu 1 302 -11 2213 113 0 0 chr5 2620496 2620789 -200464743 - AluSx SINE Alu -17 295 3 279 263 11 11 chr5 2621777 2621956 -200463576 + (CA)n Simple_repeat Simple_repeat 1 179 0 337 376 0 0 chr5 2622047 2622225 -200463307 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 278 0 6 chr5 2622257 2622437 -200463095 + (CA)n Simple_repeat Simple_repeat 2 180 0 286 269 13 0 chr5 2622478 2622556 -200462976 + (CA)n Simple_repeat Simple_repeat 1 79 0 226 260 16 0 chr5 2622577 2622704 -200462828 + (CA)n Simple_repeat Simple_repeat 1 129 0 518 226 36 48 chr5 2623453 2623621 -200461911 + MER5A DNA MER1_type 2 167 -22 2019 131 35 26 chr5 2625015 2625359 -200460173 + THE1B LTR MaLR 18 364 0 1741 171 0 46 chr5 2625382 2625709 -200459823 + AluSx SINE Alu 1 312 0 4165 116 4 48 chr5 2626333 2627015 -200458517 + L1PA13 LINE L1 5505 6156 -7 2265 108 3 16 chr5 2627151 2627493 -200458039 - AluSq SINE Alu 0 313 1 257 363 80 55 chr5 2628477 2628766 -200456766 - L2 LINE L2 -1 3271 2976 315 332 87 23 chr5 2629007 2629399 -200456133 - L2 LINE L2 -646 2668 2252 491 266 42 60 chr5 2629542 2629876 -200455656 - MLT1D LTR MaLR -177 328 1 358 231 0 0 chr5 2630054 2630132 -200455400 - MLT1K LTR MaLR -61 527 450 281 218 72 4 chr5 2630787 2630876 -200454656 - MLT1J LTR MaLR -288 189 74 1273 173 35 35 chr5 2632449 2632733 -200452799 + L1MA5 LINE L1 6017 6300 0 957 253 104 20 chr5 2632750 2633106 -200452426 + MLT1C LTR MaLR 80 465 -2 239 274 71 12 chr5 2633812 2633896 -200451636 + L2 LINE L2 3185 3273 -40 258 81 0 0 chr5 2639201 2639238 -200446294 + (CA)n Simple_repeat Simple_repeat 2 38 0 2247 117 3 3 chr5 2640467 2640775 -200444757 - AluSx SINE Alu -4 308 1 326 228 89 41 chr5 2642974 2643097 -200442435 + L1ME4a LINE L1 5992 6120 -1 25 31 0 0 chr5 2643584 2643616 -200441916 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 2643649 2643677 -200441855 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr5 2644167 2644212 -200441320 + AT_rich Low_complexity Low_complexity 1 45 0 219 217 22 0 chr5 2645284 2645330 -200440202 - L2 LINE L2 -16 3256 3210 2058 95 32 14 chr5 2645426 2645755 -200439777 + AluSq SINE Alu 5 313 0 24 0 0 0 chr5 2645845 2645869 -200439663 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 2648769 2648791 -200436741 + AT_rich Low_complexity Low_complexity 1 22 0 675 160 0 0 chr5 2649297 2649403 -200436129 - AluSc SINE Alu -6 303 198 1425 94 6 0 chr5 2649403 2649584 -200435948 + AluSc SINE Alu 9 190 -119 233 282 0 24 chr5 2652630 2652715 -200432817 + GA-rich Low_complexity Low_complexity 2 84 0 21 0 0 0 chr5 2652816 2652837 -200432695 + AT_rich Low_complexity Low_complexity 1 21 0 222 91 0 0 chr5 2655519 2655552 -200429980 + (TC)n Simple_repeat Simple_repeat 2 34 0 200 209 23 0 chr5 2658968 2659011 -200426521 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 638 132 48 12 chr5 2659018 2659185 -200426347 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 490 133 31 8 chr5 2659212 2659340 -200426192 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 3016 136 21 14 chr5 2659369 2659885 -200425647 - HSMAR2 DNA Mariner -2 1300 781 247 265 34 17 chr5 2659936 2660053 -200425479 + L1MEd LINE L1 990 1108 -5011 2439 174 31 0 chr5 2660983 2661398 -200424134 - MSTA LTR MaLR 0 428 1 229 294 11 0 chr5 2662194 2662286 -200423246 + L1MEd LINE L1 2833 2925 -3204 25 65 0 0 chr5 2662417 2662463 -200423069 + AT_rich Low_complexity Low_complexity 1 46 0 316 281 81 25 chr5 2662701 2662861 -200422671 - MIR SINE MIR 0 262 94 231 179 26 13 chr5 2662955 2663033 -200422499 + (TA)n Simple_repeat Simple_repeat 1 79 0 316 325 68 16 chr5 2663074 2663323 -200422209 + L1M4 LINE L1 5069 5330 -816 1479 255 3 3 chr5 2663548 2663905 -200421627 + L1PB4 LINE L1 5795 6151 -5 378 228 104 41 chr5 2663955 2664223 -200421309 - L1M4 LINE L1 -3057 3089 2805 * 875 288 18 0 chr5 2664220 2664498 -200421034 - L1ME2 LINE L1 -187 5977 5695 578 214 132 31 chr5 2664614 2664835 -200420697 - Charlie2 DNA MER1_type -106 2756 2490 1926 146 7 7 chr5 2664835 2665136 -200420396 + AluSx SINE Alu 1 301 -11 578 214 132 31 chr5 2665136 2665241 -200420291 - Charlie2 DNA MER1_type -372 2490 2397 410 279 268 4 chr5 2665247 2665516 -200420016 - Charlie2b DNA MER1_type -1748 1034 695 219 167 0 0 chr5 2665547 2665589 -200419943 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1441 206 62 62 chr5 2665698 2665907 -200419625 - MLT1A2 LTR MaLR 0 374 163 896 167 0 0 chr5 2665907 2666039 -200419493 - FLAM_C SINE Alu -1 132 1 1441 206 62 62 chr5 2666039 2666203 -200419329 - MLT1A2 LTR MaLR -210 164 1 298 282 130 0 chr5 2666207 2666338 -200419194 - Charlie2b DNA MER1_type -2207 575 428 356 360 20 0 chr5 2666369 2666519 -200419013 - Charlie2b DNA MER1_type -2544 318 166 533 232 34 11 chr5 2666520 2666697 -200418835 + L1MEc LINE L1 2168 2348 -4048 292 217 0 0 chr5 2666699 2666759 -200418773 + AluJ/monomer SINE Alu 241 300 -2 737 259 102 32 chr5 2666773 2667147 -200418385 + L1MEc LINE L1 2303 2702 -3513 348 189 90 115 chr5 2667152 2667199 -200418333 - MSTC LTR MaLR -242 123 76 2133 110 7 7 chr5 2667199 2667490 -200418042 - AluSp SINE Alu -22 291 1 348 189 90 115 chr5 2667490 2667564 -200417968 - MSTC LTR MaLR -289 76 5 21 36 0 0 chr5 2669404 2669432 -200416100 + AT_rich Low_complexity Low_complexity 1 28 0 1704 194 42 35 chr5 2669653 2670082 -200415450 - L1 LINE L1 -816 5330 4899 255 252 55 84 chr5 2670082 2670320 -200415212 + MLT1H LTR MaLR 221 451 -98 448 326 57 6 chr5 2670822 2670997 -200414535 + MIR SINE MIR 43 226 -36 1867 144 92 23 chr5 2672493 2672841 -200412691 + THE1C LTR MaLR 1 372 -3 689 164 4 0 chr5 2673360 2673592 -200411940 + (CA)n Simple_repeat Simple_repeat 1 233 0 270 293 140 25 chr5 2673648 2673805 -200411727 - MIR SINE MIR -10 252 78 23 33 0 0 chr5 2675240 2675270 -200410262 + AT_rich Low_complexity Low_complexity 1 30 0 1810 231 25 104 chr5 2675878 2676598 -200408934 + L1ME2 LINE L1 4615 5277 -869 815 212 0 0 chr5 2676607 2676753 -200408779 - FRAM SINE Alu -21 155 10 2229 246 60 29 chr5 2676771 2677259 -200408273 + L1ME2 LINE L1 5282 5804 -360 2849 104 8 8 chr5 2677259 2677634 -200407898 + THE1C LTR MaLR 1 375 0 2229 246 60 29 chr5 2677634 2677916 -200407616 + L1ME2 LINE L1 5804 6076 -88 194 250 40 53 chr5 2681611 2681687 -200403845 + L2 LINE L2 1634 1708 -1606 1578 183 3 13 chr5 2681718 2682045 -200403487 + AluJo SINE Alu 1 312 0 1209 140 5 5 chr5 2682521 2682714 -200402818 - L1PA13 LINE L1 -5 6158 5966 1464 117 2 14 chr5 2682714 2682988 -200402544 + L1PA12 LINE L1 5754 6017 -114 664 315 247 3 chr5 2683025 2683660 -200401872 + L2 LINE L2 2186 2975 -339 353 201 141 67 chr5 2684444 2684593 -200400939 + L1MC4 LINE L1 7688 7847 -195 4774 225 53 39 chr5 2684666 2685231 -200400301 + L1MD1 LINE L1 1136 1692 -4848 1608 174 48 61 chr5 2685231 2685610 -200399922 + MLT1A2 LTR MaLR 1 374 0 4774 225 53 39 chr5 2685610 2686552 -200398980 + L1MD1 LINE L1 1692 2623 -3917 1863 159 6 25 chr5 2686552 2686674 -200398858 + AluSx SINE Alu 1 124 -188 351 0 0 0 chr5 2686674 2686713 -200398819 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1863 159 6 25 chr5 2686713 2686905 -200398627 + AluSx SINE Alu 124 309 -3 4774 225 53 39 chr5 2686905 2687216 -200398316 + L1MD1 LINE L1 2623 2928 -3612 325 167 0 0 chr5 2687237 2687291 -200398241 - LTR16C LTR ERVL -30 461 408 1444 267 17 8 chr5 2687333 2687808 -200397724 + L1MD1 LINE L1 2959 3437 -3103 1400 243 41 10 chr5 2687801 2688002 -200397530 + L1MD1 LINE L1 5964 6157 -405 * 779 191 0 22 chr5 2688002 2688138 -200397394 + FLAM_C SINE Alu 1 133 0 1400 243 41 10 chr5 2688138 2688343 -200397189 + L1MD1 LINE L1 6157 6380 -182 735 164 37 22 chr5 2688351 2688485 -200397047 + FLAM_C SINE Alu 2 137 -6 453 275 35 7 chr5 2688598 2688740 -200396792 + LTR16C LTR ERVL 316 461 -30 2542 219 9 6 chr5 2688929 2689462 -200396070 - MLT1-int LTR MaLR -835 536 2 21 36 0 0 chr5 2689630 2689658 -200395874 + AT_rich Low_complexity Low_complexity 1 28 0 3064 198 18 36 chr5 2689794 2689970 -200395562 + L1MB3 LINE L1 5446 5624 -559 1575 167 16 46 chr5 2689970 2690105 -200395427 + AluJb SINE Alu 1 138 -174 2024 138 7 0 chr5 2690105 2690402 -200395130 + AluSx SINE Alu 3 301 -11 1575 167 16 46 chr5 2690402 2690571 -200394961 + AluJb SINE Alu 138 296 -16 3064 198 18 36 chr5 2690571 2691067 -200394465 + L1MB3 LINE L1 5624 6106 -77 21 36 0 0 chr5 2691311 2691339 -200394193 + AT_rich Low_complexity Low_complexity 1 28 0 414 269 62 24 chr5 2692527 2692735 -200392797 + MER20 DNA MER1_type 1 216 -3 2498 58 0 29 chr5 2692957 2693270 -200392262 - AluY SINE Alu -7 304 1 499 293 80 52 chr5 2693432 2693920 -200391612 - L2 LINE L2 -208 3064 2556 1879 171 3 0 chr5 2694129 2694428 -200391104 - AluJo SINE Alu -12 300 1 210 71 0 0 chr5 2694951 2694979 -200390553 + (TG)n Simple_repeat Simple_repeat 1 28 0 305 275 58 72 chr5 2694981 2695119 -200390413 - L2 LINE L2 0 3272 3137 488 226 80 0 chr5 2696296 2696433 -200389099 - L1ME1 LINE L1 -65 6101 5954 1490 193 51 10 chr5 2696568 2696864 -200388668 - AluJb SINE Alu -4 308 1 2565 169 55 29 chr5 2696972 2697276 -200388256 + MER7C DNA MER2_type 40 366 -2662 2265 83 0 64 chr5 2697276 2697603 -200387929 - AluSq SINE Alu -7 306 1 2565 169 55 29 chr5 2697603 2697847 -200387685 + MER7C DNA MER2_type 366 602 0 21 0 0 0 chr5 2698088 2698109 -200387423 + AT_rich Low_complexity Low_complexity 1 21 0 1495 268 106 19 chr5 2699741 2700356 -200385176 + L1MCa LINE L1 21 688 -5738 1558 215 95 23 chr5 2702789 2702835 -200382697 - MLT2C2 LTR ERVL -1 463 422 285 98 0 0 chr5 2702835 2702876 -200382656 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 215 95 23 chr5 2702876 2703261 -200382271 - MLT2C2 LTR ERVL -42 422 1 183 80 0 0 chr5 2703463 2703488 -200382044 + (TG)n Simple_repeat Simple_repeat 2 26 0 1981 156 0 13 chr5 2704234 2704548 -200380984 + AluJb SINE Alu 1 310 -2 33 25 0 0 chr5 2704593 2704633 -200380899 + AT_rich Low_complexity Low_complexity 1 40 0 2759 32 0 0 chr5 2705083 2705391 -200380141 - AluY SINE Alu -3 308 1 27 49 0 0 chr5 2706872 2706913 -200378619 + AT_rich Low_complexity Low_complexity 1 41 0 697 259 49 5 chr5 2707279 2707484 -200378048 - MER20 DNA MER1_type -5 214 1 2149 134 3 0 chr5 2708012 2708319 -200377213 + AluSg SINE Alu 1 308 -2 565 301 75 84 chr5 2708468 2709008 -200376524 + L1MC/D LINE L1 5245 5780 -747 24 32 0 0 chr5 2709281 2709312 -200376220 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 2710043 2710064 -200375468 + AT_rich Low_complexity Low_complexity 1 21 0 270 136 0 0 chr5 2710211 2710255 -200375277 + (T)n Simple_repeat Simple_repeat 1 44 0 22 56 0 0 chr5 2710542 2710578 -200374954 + AT_rich Low_complexity Low_complexity 1 36 0 180 158 0 0 chr5 2710791 2710829 -200374703 + (TG)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr5 2713106 2713150 -200372382 + (CA)n Simple_repeat Simple_repeat 2 45 0 672 36 0 0 chr5 2716592 2716675 -200368857 + (TC)n Simple_repeat Simple_repeat 2 84 0 2310 42 0 0 chr5 2718888 2719152 -200366380 + AluY SINE Alu 40 303 -8 1950 169 80 3 chr5 2719389 2719762 -200365770 + MER57A LTR ERV1 2 403 0 2144 122 0 3 chr5 2719910 2720205 -200365327 - AluSq SINE Alu -15 298 5 2655 34 7 0 chr5 2720634 2720932 -200364600 - AluY SINE Alu -11 300 1 24 0 0 0 chr5 2720995 2721019 -200364513 + AT_rich Low_complexity Low_complexity 1 24 0 2023 147 0 10 chr5 2721021 2721334 -200364198 + AluSg SINE Alu 1 310 0 1916 138 56 30 chr5 2721354 2721658 -200363874 + AluJb SINE Alu 1 312 0 1032 70 0 0 chr5 2721828 2721957 -200363575 - AluY SINE Alu -6 305 177 1988 137 0 3 chr5 2722756 2723049 -200362483 + AluJo SINE Alu 14 305 -7 2133 148 0 0 chr5 2723076 2723423 -200362109 + AluSq SINE Alu 1 347 0 182 405 0 0 chr5 2723446 2723520 -200362012 - MIR SINE MIR -12 250 177 219 36 0 0 chr5 2725325 2725353 -200360179 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 492 304 170 37 chr5 2725497 2725955 -200359577 - L2 LINE L2 -365 2949 2431 741 143 24 18 chr5 2727644 2727812 -200357720 + G-rich Low_complexity Low_complexity 2 170 0 205 104 0 42 chr5 2727826 2727874 -200357658 + (GGGGA)n Simple_repeat Simple_repeat 4 49 0 1868 159 10 0 chr5 2731915 2732241 -200353291 - AluSx SINE Alu 0 312 1 1367 230 7 3 chr5 2734333 2734637 -200350895 + MLT1A1 LTR MaLR 1 305 -60 214 169 31 0 chr5 2734814 2734879 -200350653 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 391 313 129 16 chr5 2734879 2735189 -200350343 + HAL1 LINE L1 858 1202 -1305 2175 97 40 3 chr5 2735687 2735986 -200349546 - AluY SINE Alu -1 310 1 288 125 18 0 chr5 2737821 2737877 -200347655 - L1PB2 LINE L1 -3 6148 6092 2243 105 10 0 chr5 2737879 2738173 -200347359 - AluSg SINE Alu -11 299 3 1012 227 122 34 chr5 2739641 2740036 -200345496 + MLT1C LTR MaLR 2 390 0 2326 105 0 0 chr5 2740287 2740582 -200344950 - AluSx SINE Alu -17 295 1 2045 128 7 0 chr5 2742210 2742499 -200343033 + AluSx SINE Alu 1 291 -21 211 68 0 68 chr5 2742502 2742546 -200342986 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1736 47 5 0 chr5 2743085 2743299 -200342233 + L1PA4 LINE L1 5940 6154 -1 1570 44 0 0 chr5 2743825 2744008 -200341524 + L1PA5 LINE L1 5964 6146 -8 591 276 116 24 chr5 2744058 2744428 -200341104 - MLT1I LTR MaLR -1 408 5 2161 93 7 0 chr5 2744800 2745089 -200340443 - AluSx SINE Alu -21 291 1 2135 139 0 0 chr5 2745860 2746170 -200339362 - AluSx SINE Alu -1 311 2 964 201 126 57 chr5 2746196 2746529 -200339003 + MLT1A1 LTR MaLR 4 359 -6 1678 122 30 19 chr5 2746530 2746801 -200338731 - L1MB2 LINE L1 -41 6130 5857 7849 214 56 19 chr5 2746805 2748303 -200337229 - L1MB2 LINE L1 -631 5552 3946 2221 106 3 0 chr5 2748303 2748605 -200336927 - AluSp SINE Alu -10 303 1 7849 214 56 19 chr5 2748605 2749401 -200336131 - L1MB2 LINE L1 -2237 3946 3181 246 222 32 0 chr5 2749731 2749794 -200335738 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 633 323 69 41 chr5 2749837 2750227 -200335305 - MLT1I LTR MaLR -2 407 7 379 292 169 64 chr5 2750309 2750730 -200334802 + L1ME LINE L1 5272 5736 -430 1426 178 108 93 chr5 2752739 2752874 -200332658 + MLT2C2 LTR ERVL 1 132 -332 843 120 0 24 chr5 2752874 2752999 -200332533 - FLAM_C SINE Alu -11 122 1 1426 178 108 93 chr5 2752999 2753262 -200332270 + MLT2C2 LTR ERVL 132 405 -59 288 120 0 0 chr5 2753309 2753359 -200332173 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 2755246 2755267 -200330265 + AT_rich Low_complexity Low_complexity 1 21 0 799 205 15 19 chr5 2755267 2755472 -200330060 - L1MA9 LINE L1 -37 6275 6072 259 100 60 0 chr5 2755882 2755932 -200329600 - L1MA9 LINE L1 -241 6071 6019 2713 130 17 9 chr5 2757078 2757500 -200328032 - MSTA LTR MaLR 0 428 4 238 184 102 0 chr5 2757571 2757620 -200327912 + L2 LINE L2 3213 3266 -6 26 88 0 0 chr5 2758208 2758276 -200327256 + AT_rich Low_complexity Low_complexity 1 68 0 378 340 48 14 chr5 2759385 2759532 -200326000 - MIR SINE MIR -4 258 107 25 0 0 0 chr5 2760213 2760238 -200325294 + AT_rich Low_complexity Low_complexity 1 25 0 1794 126 48 0 chr5 2760246 2760538 -200324994 + AluSx SINE Alu 1 305 0 1774 244 125 70 chr5 2760610 2761323 -200324209 + MER21B LTR ERV1 1 752 -111 183 80 0 0 chr5 2761339 2761364 -200324168 + (A)n Simple_repeat Simple_repeat 1 25 0 184 373 63 0 chr5 2761478 2761620 -200323912 + MIR SINE MIR 28 178 -84 359 242 0 11 chr5 2761774 2761865 -200323667 - MLT1A2 LTR MaLR -114 276 187 197 139 23 0 chr5 2761874 2761917 -200323615 + GA-rich Low_complexity Low_complexity 1 44 0 369 209 131 69 chr5 2761922 2762083 -200323449 - MLT1A2 LTR MaLR -217 173 3 5914 118 17 1 chr5 2762130 2763333 -200322199 + L1PA13 LINE L1 4961 6158 -5 1985 129 3 0 chr5 2763333 2763643 -200321889 + AluSx SINE Alu 1 311 -1 248 307 64 21 chr5 2764967 2765107 -200320425 - LTR67 LTR ERVL -4 553 408 1768 141 32 0 chr5 2766525 2766809 -200318723 + AluSx SINE Alu 1 293 -19 294 125 0 0 chr5 2766809 2766857 -200318675 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 1103 119 6 0 chr5 2766859 2767035 -200318497 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 200 278 69 0 chr5 2767116 2767188 -200318344 + MIR3 SINE MIR 115 191 -17 213 65 0 0 chr5 2767384 2767415 -200318117 + (CA)n Simple_repeat Simple_repeat 2 32 0 188 297 16 0 chr5 2768205 2768269 -200317263 + MIR SINE MIR 194 258 -4 660 256 61 17 chr5 2769681 2770004 -200315528 + MER31B LTR ERV1 2 661 0 600 244 31 12 chr5 2770722 2770882 -200314650 - L1MD3 LINE L1 -13 7982 7820 681 261 168 28 chr5 2770905 2771106 -200314426 + L1MC4a LINE L1 7299 7555 -253 1727 188 5 72 chr5 2771106 2771520 -200314012 - MLT1B LTR MaLR -4 386 1 681 261 168 28 chr5 2771520 2771609 -200313923 + L1MC4a LINE L1 7555 7630 -178 2215 110 0 0 chr5 2771621 2771922 -200313610 - AluSg SINE Alu -9 301 1 2492 117 14 0 chr5 2772750 2773109 -200312423 + THE1B LTR MaLR 1 364 0 467 290 134 44 chr5 2773155 2773721 -200311811 - L1ME4a LINE L1 -240 5881 5265 2282 76 0 3 chr5 2774033 2774335 -200311197 - AluY SINE Alu -10 301 1 273 57 0 0 chr5 2775969 2776004 -200309528 + (A)n Simple_repeat Simple_repeat 1 35 0 393 241 52 9 chr5 2777928 2778044 -200307488 + L1MC3 LINE L1 7019 7139 -646 2061 220 70 55 chr5 2778078 2778750 -200306782 + L1MD3 LINE L1 7314 7995 0 1500 149 23 62 chr5 2779388 2779696 -200305836 + AluJb SINE Alu 1 296 -16 568 259 202 3 chr5 2780125 2780496 -200305036 + Charlie2 DNA MER1_type 1886 2330 -532 346 239 128 13 chr5 2780542 2780776 -200304756 + Charlie2 DNA MER1_type 2402 2662 -200 3428 35 2 0 chr5 2780863 2781265 -200304267 - L1PA5 LINE L1 -11 6143 5741 437 311 14 0 chr5 2781326 2781474 -200304058 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2781480 2781769 -200303763 + AluSc SINE Alu 1 296 -13 29 0 0 0 chr5 2784309 2784338 -200301194 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 2788086 2788121 -200297411 + AT_rich Low_complexity Low_complexity 1 35 0 239 212 15 0 chr5 2789327 2789393 -200296139 - L1ME4a LINE L1 -12 6109 6043 213 154 0 0 chr5 2789957 2789996 -200295536 + (CA)n Simple_repeat Simple_repeat 1 39 0 673 210 84 0 chr5 2790107 2790274 -200295258 - L1ME4a LINE L1 -501 5663 5483 315 258 107 67 chr5 2790284 2790509 -200295023 + L1MEd LINE L1 861 1094 -5025 618 156 10 15 chr5 2790512 2790718 -200294814 + (TAGA)n Simple_repeat Simple_repeat 1 205 0 203 197 28 28 chr5 2793644 2793715 -200291817 + (TA)n Simple_repeat Simple_repeat 2 72 0 195 167 0 0 chr5 2793716 2793758 -200291774 + (CA)n Simple_repeat Simple_repeat 1 42 0 435 85 37 0 chr5 2793921 2794003 -200291529 + (CA)n Simple_repeat Simple_repeat 1 85 0 371 106 15 0 chr5 2794148 2794214 -200291318 + (CA)n Simple_repeat Simple_repeat 1 67 0 224 188 38 25 chr5 2794306 2794386 -200291146 + (TA)n Simple_repeat Simple_repeat 2 82 0 306 87 0 0 chr5 2794387 2794433 -200291099 + (CA)n Simple_repeat Simple_repeat 1 46 0 3403 144 44 72 chr5 2794445 2795168 -200290364 - Tigger3b DNA MER2_type 0 1231 529 3363 200 2 0 chr5 2795168 2795813 -200289719 - L1P LINE L1 -1632 4514 3869 635 146 45 0 chr5 2795813 2795919 -200289613 + L1PA13 LINE L1 6034 6148 -15 3419 254 28 7 chr5 2795937 2796865 -200288667 + L1M4 LINE L1 4005 4952 -1194 2295 188 120 12 chr5 2797276 2797766 -200287766 - Tigger3b DNA MER2_type -688 543 1 615 278 78 39 chr5 2797772 2798103 -200287429 - MLT2C1 LTR ERVL -51 346 3 1672 217 30 2 chr5 2802225 2802630 -200282902 - L1MC1 LINE L1 -1 6332 5917 263 170 0 0 chr5 2802630 2802677 -200282855 - MLT2B2 LTR ERVL 0 515 469 702 202 0 0 chr5 2802677 2802855 -200282677 + (CA)n Simple_repeat Simple_repeat 1 178 0 474 251 0 0 chr5 2802867 2803030 -200282502 + (CA)n Simple_repeat Simple_repeat 2 164 0 580 241 77 91 chr5 2803074 2803427 -200282105 - MLT2B2 LTR ERVL -65 349 2 873 239 198 6 chr5 2803481 2803795 -200281737 - MLT1A2 LTR MaLR 0 374 1 1552 220 3 3 chr5 2803817 2804131 -200281401 - L1MC1 LINE L1 -479 5854 5541 1677 79 130 58 chr5 2804211 2804488 -200281044 - AluSp SINE Alu -15 298 2 233 227 0 0 chr5 2805512 2805556 -200279976 + (CCA)n Simple_repeat Simple_repeat 3 46 0 571 232 211 0 chr5 2805566 2805760 -200279772 - MIR SINE MIR -18 244 10 959 246 159 36 chr5 2808385 2808825 -200276707 + MLT1D LTR MaLR 5 498 -7 217 289 96 19 chr5 2808829 2808933 -200276599 - MIR SINE MIR -40 222 111 251 232 0 98 chr5 2811014 2811096 -200274436 - MIR SINE MIR -112 150 77 227 261 43 0 chr5 2812036 2812105 -200273427 - L2 LINE L2 -621 2693 2622 2004 208 42 62 chr5 2813431 2813959 -200271573 - LTR9 LTR ERV1 -95 517 1 659 254 23 17 chr5 2813963 2814140 -200271392 - MLT1A1 LTR MaLR -185 180 3 2052 118 0 9 chr5 2814149 2814464 -200271068 - AluSq SINE Alu -1 312 1 272 222 91 30 chr5 2814482 2814581 -200270951 - MER103 DNA DNA -45 121 17 28 0 0 0 chr5 2814733 2814761 -200270771 + AT_rich Low_complexity Low_complexity 1 28 0 403 218 0 73 chr5 2814779 2814889 -200270643 + MER58 DNA MER1_type 2318 2419 -1 3426 251 85 65 chr5 2815395 2816168 -200269364 + L1ME2 LINE L1 2771 3527 -2637 1396 141 45 0 chr5 2816168 2816388 -200269144 + MER30 DNA MER1_type 1 230 0 3426 251 85 65 chr5 2816388 2817217 -200268315 + L1ME2 LINE L1 3527 4338 -1826 2258 86 7 0 chr5 2817217 2817519 -200268013 + AluSg SINE Alu 1 304 -6 3426 251 85 65 chr5 2817519 2819232 -200266300 + L1ME2 LINE L1 4338 6157 -7 477 0 0 0 chr5 2819232 2819285 -200266247 + (CA)n Simple_repeat Simple_repeat 2 54 0 488 268 94 54 chr5 2821027 2821251 -200264281 + MLT1E LTR MaLR 8 240 -353 1770 250 23 69 chr5 2821258 2821909 -200263623 - MER74B LTR ERVL -1 621 1 930 243 55 16 chr5 2821915 2822170 -200263362 + MLT1E LTR MaLR 329 593 0 213 224 35 17 chr5 2822713 2822771 -200262761 + MIR SINE MIR 108 166 -96 630 322 105 10 chr5 2822783 2823174 -200262358 - MER110 LTR ERV1 -1 490 63 1326 287 58 9 chr5 2824212 2824647 -200260885 - MLT1E2 LTR MaLR 0 626 169 1409 251 90 14 chr5 2824647 2825070 -200260462 + MLT1C LTR MaLR 1 455 -12 528 225 94 7 chr5 2825074 2825212 -200260320 - MLT1E2 LTR MaLR -466 160 11 317 217 169 0 chr5 2825227 2825310 -200260222 - MIR SINE MIR -61 201 105 3489 159 10 26 chr5 2827699 2828134 -200257398 + MER50 LTR ERV1 135 559 -175 2361 83 0 3 chr5 2828134 2828446 -200257086 - AluY SINE Alu 0 311 1 3489 159 10 26 chr5 2828446 2828620 -200256912 + MER50 LTR ERV1 559 734 0 1883 131 14 7 chr5 2830500 2830791 -200254741 + AluSx SINE Alu 3 295 -17 552 30 0 0 chr5 2830791 2830857 -200254675 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 624 253 134 35 chr5 2882443 2882922 -200202610 - MER34 LTR ERV1 0 542 17 2033 76 45 24 chr5 2882994 2883282 -200202250 + AluY SINE Alu 17 310 -1 394 264 100 80 chr5 2883358 2883759 -200201773 - MLT1H LTR MaLR -7 542 134 2277 91 3 0 chr5 2884338 2884634 -200200898 + AluY SINE Alu 1 297 -14 221 246 82 27 chr5 2885014 2885124 -200200408 + L2 LINE L2 1722 1837 -1477 1425 282 63 17 chr5 2885218 2886067 -200199465 - L1ME3 LINE L1 -88 6143 5221 553 305 97 2 chr5 2886127 2886259 -200199273 - L1ME3 LINE L1 -1627 4588 4470 594 268 58 10 chr5 2886259 2886464 -200199068 + MER58C DNA MER1_type 1 215 0 553 305 97 2 chr5 2886464 2886797 -200198735 - L1ME3 LINE L1 -1745 4470 4079 310 172 0 0 chr5 2886833 2886891 -200198641 - Alu SINE Alu -3 298 241 717 177 61 0 chr5 2886891 2887038 -200198494 - L1PA16 LINE L1 -45 6121 5966 * 1167 316 18 15 chr5 2887033 2887708 -200197824 - L1ME3 LINE L1 -2162 4053 3377 349 304 84 24 chr5 2887713 2888693 -200196839 - L1ME3 LINE L1 -4027 2369 1254 435 163 0 0 chr5 2888750 2888830 -200196702 + CT-rich Low_complexity Low_complexity 2 81 0 186 43 0 0 chr5 2891816 2891839 -200193693 + (CA)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr5 2893037 2893077 -200192455 + AT_rich Low_complexity Low_complexity 1 40 0 396 292 81 6 chr5 2893899 2894060 -200191472 - MLT1I LTR MaLR -144 265 93 1754 161 137 11 chr5 2894189 2894569 -200190963 + MSTA LTR MaLR 1 428 0 2180 105 10 0 chr5 2895541 2895835 -200189697 - AluSp SINE Alu -16 297 1 2129 99 11 11 chr5 2895835 2896117 -200189415 - AluSx SINE Alu -10 302 21 378 325 113 29 chr5 2897470 2898275 -200187257 - L1M4 LINE L1 -1101 5045 4173 2282 106 7 7 chr5 2899527 2899829 -200185703 - AluSq SINE Alu -11 302 1 259 354 0 0 chr5 2902290 2902389 -200183143 + MIR SINE MIR 140 238 -24 1920 96 44 11 chr5 2902398 2902689 -200182843 + AluY SINE Alu 1 300 0 212 200 20 0 chr5 2903459 2903509 -200182023 + (AATAG)n Simple_repeat Simple_repeat 4 54 0 232 180 73 62 chr5 2903733 2903911 -200181621 + (TG)n Simple_repeat Simple_repeat 1 180 0 461 316 128 47 chr5 2904740 2905308 -200180224 + L1MC4a LINE L1 5025 5634 -755 21 36 0 0 chr5 2905347 2905375 -200180157 + AT_rich Low_complexity Low_complexity 1 28 0 318 335 34 25 chr5 2905446 2905685 -200179847 + L1MC4a LINE L1 5737 5977 -1831 24 32 0 0 chr5 2907414 2907445 -200178087 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 2907819 2907839 -200177693 + (T)n Simple_repeat Simple_repeat 1 20 0 1186 220 57 31 chr5 2911625 2912028 -200173504 - MLT1B LTR MaLR -1 373 9 360 197 14 0 chr5 2912351 2912422 -200173110 - MER1B DNA MER1_type -139 158 87 529 200 21 15 chr5 2912834 2912980 -200172552 - MER1B DNA MER1_type -182 115 1 490 312 70 34 chr5 2914437 2914735 -200170797 + MER58B DNA MER1_type 10 318 -23 693 243 101 30 chr5 2914853 2915149 -200170383 - LTR54B LTR ERV1 -2 496 180 189 107 0 0 chr5 2915630 2915658 -200169874 + (CAA)n Simple_repeat Simple_repeat 3 30 0 388 265 5 69 chr5 2916755 2917016 -200168516 + GA-rich Low_complexity Low_complexity 1 244 0 37 99 0 0 chr5 2917236 2917357 -200168175 + AT_rich Low_complexity Low_complexity 1 121 0 664 273 61 63 chr5 2918978 2919120 -200166412 + MLT1C LTR MaLR 43 184 -283 2441 77 0 0 chr5 2919120 2919420 -200166112 + AluY SINE Alu 3 302 -9 664 273 61 63 chr5 2919420 2919687 -200165845 + MLT1C LTR MaLR 184 451 -16 212 371 71 0 chr5 2920759 2920899 -200164633 - MIR SINE MIR -21 241 92 186 43 0 0 chr5 2921266 2921289 -200164243 + (GA)n Simple_repeat Simple_repeat 2 24 0 187 191 128 0 chr5 2922997 2923044 -200162488 + L2 LINE L2 2394 2446 -868 1494 235 37 18 chr5 2923588 2923971 -200161561 + MLT1B LTR MaLR 1 390 0 2325 114 0 9 chr5 2924028 2924343 -200161189 + AluSx SINE Alu 1 312 0 2500 54 0 3 chr5 2925229 2925525 -200160007 - AluY SINE Alu -15 296 2 288 143 0 0 chr5 2925657 2925713 -200159819 + (CCCTAA)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr5 2927983 2928015 -200157517 + (CA)n Simple_repeat Simple_repeat 2 33 0 1069 78 0 48 chr5 2930367 2930533 -200154999 + MER30B DNA MER1_type 23 180 -10 355 244 33 0 chr5 2930855 2930945 -200154587 - MER81 DNA DNA 0 114 22 1309 202 133 22 chr5 2931037 2931452 -200154080 + MLT1C LTR MaLR 7 467 0 1513 118 36 5 chr5 2931893 2932114 -200153418 - MER30 DNA MER1_type 0 230 3 708 145 90 24 chr5 2932466 2932623 -200152909 - MLT2C1 LTR ERVL -40 480 199 22 35 0 0 chr5 2933560 2933589 -200151943 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 2933685 2933728 -200151804 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr5 2934859 2934880 -200150652 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 4859 216 33 48 chr5 2935736 2937293 -200148239 + Looper DNA T2_type 1 1534 -24 324 0 0 0 chr5 2937294 2937330 -200148202 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1741 215 146 30 chr5 2937341 2937807 -200147725 - MLT2B1 LTR ERVL 0 520 1 188 200 17 0 chr5 2938176 2938236 -200147296 + GA-rich Low_complexity Low_complexity 2 62 0 360 245 31 10 chr5 2939304 2939402 -200146130 + MER69 DNA AcHobo 41 140 -1086 189 0 0 0 chr5 2939871 2939892 -200145640 + (T)n Simple_repeat Simple_repeat 1 21 0 839 265 71 36 chr5 2940375 2940767 -200144765 + MLT1C LTR MaLR 60 465 -2 4050 116 20 3 chr5 2942391 2942995 -200142537 - L1PA13 LINE L1 -4 6159 5546 21 0 0 0 chr5 2943093 2943114 -200142418 + AT_rich Low_complexity Low_complexity 1 21 0 526 152 0 103 chr5 2943677 2943822 -200141710 + MER96B DNA MER1_type? 238 367 -50 294 300 0 42 chr5 2944604 2944724 -200140808 - L2 LINE L2 -2 3311 3197 2162 139 0 7 chr5 2945015 2945325 -200140207 + AluSx SINE Alu 1 308 -4 306 182 106 15 chr5 2945778 2945844 -200139688 + MIR3 SINE MIR 110 181 -27 707 197 34 11 chr5 2946381 2946559 -200138973 + MER96B DNA MER1_type? 2 183 -234 1608 196 68 46 chr5 2947163 2947616 -200137916 - MER31B LTR ERV1 0 466 4 210 341 57 48 chr5 2948755 2948984 -200136548 - L2 LINE L2 -638 2676 2446 23 0 0 0 chr5 2949056 2949079 -200136453 + AT_rich Low_complexity Low_complexity 1 23 0 540 323 72 26 chr5 2949079 2949494 -200136038 + L1MC/D LINE L1 4160 4593 -1553 433 327 92 58 chr5 2950425 2950926 -200134606 + L1MC/D LINE L1 5307 5824 -1984 26 64 0 0 chr5 2951741 2951788 -200133744 + AT_rich Low_complexity Low_complexity 1 47 0 803 244 117 7 chr5 2951901 2952208 -200133324 - MER2 DNA MER2_type -3 341 1 237 148 140 0 chr5 2952211 2952278 -200133254 + MIR SINE MIR 53 141 -67 22 0 0 0 chr5 2952424 2952446 -200133086 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 2952597 2952625 -200132907 + AT_rich Low_complexity Low_complexity 1 28 0 1831 23 5 0 chr5 2953136 2953353 -200132179 - L1PA4 LINE L1 0 6155 5938 202 265 0 0 chr5 2954520 2954569 -200130963 + GA-rich Low_complexity Low_complexity 1 49 0 1178 251 28 3 chr5 2955164 2955527 -200130005 - L1MB1 LINE L1 0 6168 5798 360 258 118 39 chr5 2956481 2956659 -200128873 - L3 LINE CR1 -231 1346 1155 222 216 0 20 chr5 2959371 2959422 -200126110 - L2 LINE L2 -2 3311 3262 320 319 35 0 chr5 2961093 2961209 -200124323 - MIR SINE MIR -108 154 35 255 312 51 13 chr5 2962226 2962383 -200123149 + MER103 DNA DNA 2 164 -2 466 222 31 8 chr5 2962542 2962716 -200122816 + MER61B LTR ERV1 1 105 -320 1412 179 36 11 chr5 2962786 2963065 -200122467 + MER61D LTR ERV1 216 501 0 1864 119 141 28 chr5 2964017 2964344 -200121188 + THE1B LTR MaLR 1 364 0 1654 215 74 17 chr5 2966024 2966442 -200119090 + MLT2B1 LTR ERVL 1 442 -78 1583 287 20 33 chr5 2967810 2968409 -200117123 + L1M2b LINE L1 14 604 -6605 594 241 48 35 chr5 2968607 2968817 -200116715 + L1M2b LINE L1 1685 1881 -5328 3695 210 16 47 chr5 2968953 2970228 -200115304 + L1M2b LINE L1 2162 3396 -3812 806 185 0 0 chr5 2970231 2970377 -200115155 + Tigger1 DNA MER2_type 1 146 -2272 1090 172 5 18 chr5 2970377 2970598 -200114934 + Tigger1 DNA MER2_type 2201 2418 0 9951 193 27 5 chr5 2970601 2972901 -200112631 + L1M2b LINE L1 3406 5757 -1451 864 177 43 22 chr5 2972904 2973136 -200112396 + L1MA5 LINE L1 3972 4208 -3000 573 135 10 0 chr5 2973126 2973230 -200112302 + L1MA5 LINE L1 5753 5857 -1351 * 5087 169 21 24 chr5 2973210 2974785 -200110747 + L1MA5 LINE L1 5789 7357 -5 1383 124 44 26 chr5 2975198 2975424 -200110108 - MER30 DNA MER1_type 0 230 1 2114 146 7 3 chr5 2975784 2976093 -200109439 + AluSx SINE Alu 3 312 0 21 0 0 0 chr5 2978062 2978083 -200107449 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 2978167 2978188 -200107344 + AT_rich Low_complexity Low_complexity 1 21 0 634 305 72 90 chr5 2980136 2980958 -200104574 + L1MDa LINE L1 1236 2042 -4498 9340 104 2 3 chr5 2981142 2983301 -200102231 + L1PA8 LINE L1 4014 6172 0 428 266 62 41 chr5 2983438 2983652 -200101880 + L1MDa LINE L1 2537 2760 -3780 866 94 78 0 chr5 2983652 2983780 -200101752 - MER85 DNA T2_type -1 138 1 428 266 62 41 chr5 2983780 2983855 -200101677 + L1MDa LINE L1 2760 2832 -3708 249 296 19 0 chr5 2983864 2983972 -200101560 - L1M4 LINE L1 -3570 2576 2467 406 264 111 0 chr5 2984108 2984316 -200101216 + L1MDa LINE L1 3176 3406 -3134 1466 160 33 4 chr5 2984318 2984593 -200100939 + L1PA16 LINE L1 5869 6151 -15 866 81 8 0 chr5 2984605 2984728 -200100804 - L1PB1 LINE L1 0 6151 6028 3644 256 79 51 chr5 2984817 2987511 -200098021 - L1M4 LINE L1 -554 5866 3030 1737 178 3 0 chr5 2987511 2987797 -200097735 - AluJb SINE Alu -22 290 4 3644 256 79 51 chr5 2987797 2988065 -200097467 - L1M4 LINE L1 -3390 3030 2771 279 173 0 0 chr5 2988089 2988141 -200097391 - L1MB8 LINE L1 -12 6166 6115 1139 154 125 38 chr5 2988142 2988382 -200097150 - Tigger2 DNA MER2_type -173 2545 1 3464 171 75 8 chr5 2988382 2989131 -200096401 - L1MB7 LINE L1 -86 6098 5300 640 251 103 37 chr5 2989098 2989719 -200095813 - L1M4 LINE L1 -3602 2780 2144 * 3719 60 6 2 chr5 2989749 2990217 -200095315 - L1PA5 LINE L1 -7 6147 5678 21 82 0 0 chr5 2990319 2990368 -200095164 + AT_rich Low_complexity Low_complexity 1 49 0 593 294 55 14 chr5 2990430 2990705 -200094827 - L1M4 LINE L1 -4644 1740 1455 2201 120 0 0 chr5 2991449 2991749 -200093783 - AluSx SINE Alu -12 300 1 2086 123 7 13 chr5 2992507 2992808 -200092724 - AluSg SINE Alu -11 299 1 310 243 157 96 chr5 2993585 2993865 -200091667 - MLT1H LTR MaLR -2 547 251 389 231 0 66 chr5 2994180 2994271 -200091261 - L2 LINE L2 0 3313 3229 200 283 71 18 chr5 2995718 2995831 -200089701 - MIR3 SINE MIR -7 201 83 254 230 0 23 chr5 2996043 2996130 -200089402 + (CATA)n Simple_repeat Simple_repeat 2 86 0 451 262 21 35 chr5 2997392 2997533 -200087999 + MLT1I LTR MaLR 247 385 -24 493 273 83 46 chr5 2997712 2998484 -200087048 + L1MEc LINE L1 2131 2893 -3322 358 182 0 0 chr5 2998515 2998570 -200086962 + Tigger5 DNA MER2_type 1 55 -2268 318 173 13 53 chr5 2998539 2998614 -200086918 + Tigger5 DNA MER2_type 2251 2322 -1 * 238 198 40 69 chr5 2998631 2998732 -200086800 + L1MEc LINE L1 2924 3021 -3194 202 303 174 0 chr5 2998732 2998864 -200086668 - MIR SINE MIR -12 250 96 2686 33 0 3 chr5 2998952 2999259 -200086273 + AluY SINE Alu 1 306 -5 596 264 45 80 chr5 2999269 2999841 -200085691 + L1MEc LINE L1 3469 4020 -2195 35 24 0 0 chr5 2999844 2999886 -200085646 + AT_rich Low_complexity Low_complexity 1 42 0 591 245 54 0 chr5 2999927 3000074 -200085458 + MLT1D LTR MaLR 1 155 -350 976 211 18 22 chr5 3000141 3000364 -200085168 + MLT1D LTR MaLR 271 492 -13 1964 133 7 4 chr5 3000822 3001101 -200084431 + AluSq SINE Alu 1 280 -33 267 31 0 0 chr5 3001101 3001133 -200084399 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr5 3001774 3001805 -200083727 + AT_rich Low_complexity Low_complexity 1 31 0 220 386 59 5 chr5 3002487 3002689 -200082843 + MIR SINE MIR 22 234 -28 235 225 33 42 chr5 3002740 3002860 -200082672 + (TATATG)n Simple_repeat Simple_repeat 6 124 0 237 268 28 0 chr5 3003076 3003147 -200082385 + CT-rich Low_complexity Low_complexity 3 75 0 2638 189 34 55 chr5 3003244 3003806 -200081726 - MER52A LTR ERV1 0 1755 1206 1286 227 88 65 chr5 3003779 3004268 -200081264 - MER52A LTR ERV1 -304 1349 531 * 307 264 172 0 chr5 3004292 3004379 -200081153 - MER52A LTR ERV1 -671 1084 983 518 219 233 7 chr5 3004396 3004542 -200080990 - MER52A LTR ERV1 -664 1091 913 3620 198 89 28 chr5 3004610 3005563 -200079969 - MER52A LTR ERV1 -658 1097 1 4138 149 17 8 chr5 3007099 3007804 -200077728 + MER50 LTR ERV1 1 711 -23 717 204 0 0 chr5 3008832 3008984 -200076548 + T-rich Low_complexity Low_complexity 1 152 0 2275 115 3 3 chr5 3008988 3009301 -200076231 - AluSq SINE Alu 0 313 1 22 0 0 0 chr5 3010564 3010586 -200074946 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 3011735 3011755 -200073777 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 641 244 0 0 chr5 3012492 3012668 -200072864 + (CTGGGG)n Simple_repeat Simple_repeat 5 180 0 615 241 0 0 chr5 3012735 3012909 -200072623 + (CTGGGG)n Simple_repeat Simple_repeat 3 176 0 584 258 0 0 chr5 3012929 3013107 -200072425 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 569 274 6 0 chr5 3013119 3013471 -200072061 + (CTGGGG)n Simple_repeat Simple_repeat 1 354 0 1979 150 7 0 chr5 3014732 3015038 -200070494 - AluSx SINE Alu -4 308 1 28 61 0 0 chr5 3015785 3015834 -200069698 + AT_rich Low_complexity Low_complexity 1 49 0 1297 214 64 113 chr5 3017447 3017961 -200067571 - MLT1E LTR MaLR -4 589 75 2225 125 0 0 chr5 3018581 3018893 -200066639 - AluSx SINE Alu 0 312 1 284 307 83 43 chr5 3018946 3019200 -200066332 + L1MC/D LINE L1 5476 5739 -382 182 132 53 0 chr5 3019693 3019731 -200065801 + CT-rich Low_complexity Low_complexity 1 40 0 266 176 20 0 chr5 3021053 3021104 -200064428 + LTR30 LTR ERV1 1 52 -670 1253 91 37 118 chr5 3021104 3021368 -200064164 + LTR12 LTR ERV1 57 258 -456 305 291 26 0 chr5 3021368 3021485 -200064047 + LTR30 LTR ERV1 524 643 -79 2526 84 0 0 chr5 3021485 3021807 -200063725 + LTR12 LTR ERV1 377 698 -16 1223 177 101 122 chr5 3021811 3022246 -200063286 + MSTA LTR MaLR 3 428 0 533 249 80 127 chr5 3022943 3023345 -200062187 + MLT1C LTR MaLR 1 464 -3 203 256 0 44 chr5 3025454 3025544 -200059988 + (TA)n Simple_repeat Simple_repeat 2 87 0 213 121 0 0 chr5 3026400 3026433 -200059099 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 495 0 0 0 chr5 3028532 3028587 -200056945 + (TA)n Simple_repeat Simple_repeat 2 56 0 2149 111 0 0 chr5 3028586 3028887 -200056645 - AluSg SINE Alu 0 301 1 28 48 0 0 chr5 3029081 3029123 -200056409 + AT_rich Low_complexity Low_complexity 1 42 0 1673 182 88 45 chr5 3029382 3029849 -200055683 + MLT2B1 LTR ERVL 1 487 -33 1791 214 86 34 chr5 3031878 3032402 -200053130 + L1MB7 LINE L1 5634 6184 0 291 365 58 12 chr5 3032745 3032986 -200052546 + MIR SINE MIR 8 259 -3 264 363 7 15 chr5 3033930 3034065 -200051467 + MIR SINE MIR 84 217 -45 2069 112 22 0 chr5 3035556 3035832 -200049700 + AluSg SINE Alu 13 294 -16 3368 224 35 33 chr5 3036049 3036363 -200049169 - L1MB8 LINE L1 -7 6171 5859 2308 101 7 0 chr5 3036363 3036669 -200048863 - AluSx SINE Alu -2 310 3 3368 224 35 33 chr5 3036669 3037232 -200048300 - L1MB8 LINE L1 -319 5859 5298 1930 192 78 2 chr5 3037232 3037628 -200047904 + MSTB LTR MaLR 1 426 0 3368 224 35 33 chr5 3037628 3038163 -200047369 - L1MB8 LINE L1 -880 5298 4747 2472 71 0 7 chr5 3038163 3038473 -200047059 - AluY SINE Alu -3 308 1 3368 224 35 33 chr5 3038473 3038590 -200046942 - L1MB8 LINE L1 -1431 4747 4632 1852 64 0 0 chr5 3038690 3038943 -200046589 + AluY SINE Alu 67 319 0 32 43 0 0 chr5 3039142 3039188 -200046344 + AT_rich Low_complexity Low_complexity 1 46 0 1544 267 69 18 chr5 3039227 3039833 -200045699 + L1ME2 LINE L1 5291 5927 -237 4683 147 14 13 chr5 3039934 3040710 -200044822 - Tigger1 DNA MER2_type -1519 899 123 1111 128 24 0 chr5 3041355 3041519 -200044013 + AluSp SINE Alu 103 270 -43 276 77 0 0 chr5 3041522 3041561 -200043971 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 763 321 69 53 chr5 3041645 3042225 -200043307 - L1MC4a LINE L1 -1795 6013 5425 950 232 70 35 chr5 3042250 3042595 -200042937 + MER74B LTR ERVL 261 617 -5 953 236 16 64 chr5 3042598 3043047 -200042485 - L1MC4a LINE L1 -717 5449 5024 1082 156 0 118 chr5 3044634 3044871 -200040661 - AluJb SINE Alu -19 293 85 239 308 56 52 chr5 3047650 3047676 -200037856 + HAL1 LINE L1 2254 2278 -229 189 0 0 0 chr5 3047676 3047697 -200037835 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 239 308 56 52 chr5 3047697 3047920 -200037612 + HAL1 LINE L1 2278 2504 -3 231 184 53 13 chr5 3047991 3048067 -200037465 + CT-rich Low_complexity Low_complexity 1 79 0 1122 209 17 120 chr5 3049391 3049798 -200035734 - MLT1A1 LTR MaLR 0 365 1 492 233 194 30 chr5 3049829 3050061 -200035471 + MER5C DNA MER1_type 55 324 0 22 0 0 0 chr5 3051176 3051198 -200034334 + AT_rich Low_complexity Low_complexity 1 22 0 363 276 155 0 chr5 3053532 3053648 -200031884 - MIR SINE MIR -11 251 118 208 329 44 44 chr5 3053622 3053759 -200031773 - MER91A DNA MER1_type -26 170 34 * 641 149 0 8 chr5 3056488 3056622 -200028910 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 5358 155 21 25 chr5 3056718 3057827 -200027705 - L1MA7 LINE L1 0 6291 5188 4775 173 19 4 chr5 3057820 3058790 -200026742 + L1MA7 LINE L1 4202 5185 -961 * 1900 211 0 0 chr5 3062265 3062611 -200022921 - MER7A DNA MER2_type -1 345 2 2238 93 0 0 chr5 3062712 3062992 -200022540 + AluSx SINE Alu 33 312 0 297 0 0 0 chr5 3063277 3063310 -200022222 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 3063622 3063647 -200021885 + AT_rich Low_complexity Low_complexity 1 25 0 208 298 18 0 chr5 3066548 3066605 -200018927 + CT-rich Low_complexity Low_complexity 6 63 0 696 309 75 10 chr5 3067215 3067510 -200018022 - L3 LINE CR1 -622 955 642 861 190 0 118 chr5 3068045 3068282 -200017250 - AluJb SINE Alu -19 293 85 180 0 0 0 chr5 3068684 3068704 -200016828 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 288 0 0 0 chr5 3069955 3069987 -200015545 + (TG)n Simple_repeat Simple_repeat 2 33 0 2092 132 0 0 chr5 3072158 3072459 -200013073 - AluSg SINE Alu 0 301 1 304 216 72 72 chr5 3073452 3073577 -200011955 - L1MEd LINE L1 -5176 943 819 24 0 0 0 chr5 3074127 3074151 -200011381 + AT_rich Low_complexity Low_complexity 1 24 0 520 370 49 52 chr5 3074278 3074595 -200010937 + L1MC4a LINE L1 4296 4612 -1534 2277 60 32 11 chr5 3074595 3074879 -200010653 - AluY SINE Alu -21 290 1 520 370 49 52 chr5 3074879 3075433 -200010099 + L1MC4a LINE L1 4612 5165 -981 226 253 0 12 chr5 3075590 3075673 -200009859 + L1MC4a LINE L1 5316 5397 -962 816 228 140 40 chr5 3075870 3076308 -200009224 + MLT1D LTR MaLR 5 378 -12 320 250 40 92 chr5 3076586 3076738 -200008794 + L1MC4a LINE L1 6121 6264 -1544 353 277 64 58 chr5 3076824 3077012 -200008520 + L1ME4a LINE L1 5933 6121 0 23 33 0 0 chr5 3078290 3078320 -200007212 + AT_rich Low_complexity Low_complexity 1 30 0 201 119 24 24 chr5 3079879 3079921 -200005611 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 278 80 60 0 chr5 3079923 3079973 -200005559 - L1MA4 LINE L1 -5 6295 6243 3097 38 0 0 chr5 3080216 3080584 -200004948 - L1PA4 LINE L1 -3 6152 5785 256 242 39 70 chr5 3081596 3081724 -200003808 - LTR16C LTR ERVL -2 489 366 1051 39 0 0 chr5 3085089 3085217 -200000315 + L1PA4 LINE L1 6028 6155 0 587 207 40 8 chr5 3088792 3088940 -199996592 - MLT1C LTR MaLR 0 458 238 239 321 97 12 chr5 3089021 3089186 -199996346 - MLT1C LTR MaLR -322 183 5 1194 214 117 35 chr5 3090968 3091285 -199994247 + MER2 DNA MER2_type 1 343 -1 351 332 124 31 chr5 3091518 3091744 -199993788 - L3 LINE CR1 -1050 527 281 449 312 53 72 chr5 3091790 3092053 -199993479 - MIR SINE MIR -3 259 2 2472 85 0 0 chr5 3096713 3097008 -199988524 - AluSg SINE Alu -15 295 1 21 0 0 0 chr5 3097016 3097037 -199988495 + AT_rich Low_complexity Low_complexity 1 21 0 2219 84 19 22 chr5 3097637 3097948 -199987584 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5 3097983 3098006 -199987526 + AT_rich Low_complexity Low_complexity 1 23 0 2204 133 0 0 chr5 3099162 3099462 -199986070 + AluSq SINE Alu 1 300 -13 595 257 60 6 chr5 3099644 3099827 -199985705 + MIR SINE MIR 67 259 -3 669 232 46 66 chr5 3100495 3100754 -199984778 - MLT1C LTR MaLR 0 467 214 1724 196 33 53 chr5 3100977 3101294 -199984238 + MER65A LTR ERV1 1 308 -137 6222 75 0 1 chr5 3101294 3102122 -199983410 + L1PA7 LINE L1 5346 6154 0 1724 196 33 53 chr5 3102122 3102258 -199983274 + MER65A LTR ERV1 308 445 0 1760 183 36 25 chr5 3103758 3104119 -199981413 - MLT1A1 LTR MaLR 0 365 1 2283 98 0 3 chr5 3104270 3104567 -199980965 + AluSg SINE Alu 1 296 -14 1606 155 66 7 chr5 3104715 3104986 -199980546 + AluJo SINE Alu 7 293 -19 1918 139 28 0 chr5 3107995 3108283 -199977249 - AluSx SINE Alu -16 296 1 228 196 0 20 chr5 3110049 3110100 -199975432 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 2146 114 20 0 chr5 3110490 3110788 -199974744 + AluSx SINE Alu 1 304 -8 202 209 0 0 chr5 3110920 3110963 -199974569 + (CA)n Simple_repeat Simple_repeat 2 44 0 385 181 44 0 chr5 3114048 3114149 -199971383 + L1M4 LINE L1 1024 1275 -5271 24 53 0 0 chr5 3114222 3114260 -199971272 + AT_rich Low_complexity Low_complexity 1 38 0 399 277 80 40 chr5 3114344 3114568 -199970964 + L1ME LINE L1 5590 5822 -299 532 269 83 65 chr5 3114583 3115329 -199970203 + L1M4 LINE L1 1389 2360 -4465 4958 262 58 30 chr5 3115330 3116357 -199969175 + L1M4 LINE L1 2384 3381 -3263 1780 168 28 0 chr5 3116357 3116642 -199968890 - AluJb SINE Alu -18 294 2 4958 262 58 30 chr5 3116642 3117884 -199967648 + L1M4 LINE L1 3381 4686 -1958 2074 253 62 37 chr5 3118004 3119253 -199966279 + L1M4 LINE L1 4930 6222 -440 318 295 103 46 chr5 3119493 3119795 -199965737 + L1M4 LINE L1 2411 2729 -3653 453 194 136 99 chr5 3119979 3120221 -199965311 - MLT1F1 LTR MaLR -209 358 108 496 141 202 10 chr5 3120385 3120484 -199965048 - Tigger1 DNA MER2_type 0 2418 2301 900 181 66 6 chr5 3121680 3121862 -199963670 + MER58 DNA MER1_type 1 193 -148 2184 102 3 10 chr5 3121889 3122184 -199963348 + AluY SINE Alu 1 293 -18 7384 127 23 6 chr5 3122184 3123347 -199962185 - Tigger1 DNA MER2_type -109 2309 1127 1083 223 48 53 chr5 3123447 3123824 -199961708 + MLT1C LTR MaLR 77 451 -16 548 276 65 5 chr5 3124125 3124324 -199961208 - MLT1J LTR MaLR -246 265 55 1519 134 0 0 chr5 3124812 3125028 -199960504 - AluSg/x SINE Alu -1 311 96 236 324 76 34 chr5 3125246 3125508 -199960024 - L1ME LINE L1 -302 5819 5547 1245 204 106 23 chr5 3126602 3126950 -199958582 + MLT1B LTR MaLR 6 382 -8 548 232 132 32 chr5 3127487 3127707 -199957825 + MLT1C LTR MaLR 6 247 -220 1057 202 51 14 chr5 3128834 3129216 -199956316 - MLT1B LTR MaLR -38 352 2 2256 105 0 3 chr5 3129285 3129636 -199955896 + AluSg SINE Alu 1 350 0 1024 174 9 19 chr5 3130688 3130900 -199954632 + L1MA4 LINE L1 6091 6300 0 453 292 97 36 chr5 3130900 3131439 -199954093 + L1MC/D LINE L1 951 1504 -4625 29 47 0 0 chr5 3131665 3131708 -199953824 + AT_rich Low_complexity Low_complexity 1 43 0 297 323 143 37 chr5 3132165 3132470 -199953062 + L1MC/D LINE L1 3457 3818 -2311 2248 99 0 0 chr5 3132470 3132786 -199952746 - AluSx SINE Alu 0 318 3 297 323 143 37 chr5 3132786 3132885 -199952647 + L1MC/D LINE L1 3818 3905 -2224 * 686 252 38 24 chr5 3132872 3133082 -199952450 + L1MD3 LINE L1 7783 7995 0 455 291 166 32 chr5 3133079 3133519 -199952013 + HAL1 LINE L1 1553 2051 -456 * 21 0 0 0 chr5 3134114 3134135 -199951397 + AT_rich Low_complexity Low_complexity 1 21 0 425 308 74 8 chr5 3134244 3134504 -199951028 + L1MC/D LINE L1 5197 5471 -743 717 235 54 0 chr5 3134606 3134810 -199950722 - L1ME3 LINE L1 0 6162 5948 2347 248 64 90 chr5 3134943 3135105 -199950427 - L1ME3 LINE L1 -1127 5019 4854 406 159 16 0 chr5 3135105 3135198 -199950334 - AluJ/FRAM SINE Alu 0 314 221 2347 248 64 90 chr5 3135198 3136328 -199949204 - L1ME3 LINE L1 -1292 4854 3699 2374 244 74 53 chr5 3136348 3136595 -199948937 + L1M4 LINE L1 3797 4037 -2109 2065 119 0 14 chr5 3136595 3136930 -199948602 + AluSp SINE Alu 1 331 0 2374 244 74 53 chr5 3136930 3137780 -199947752 + L1M4 LINE L1 4037 4919 -1227 499 197 0 26 chr5 3137911 3138028 -199947504 + L1MB8 LINE L1 6064 6177 -1 1748 210 54 32 chr5 3138067 3139199 -199946333 - L1MC/D LINE L1 -608 5751 4618 210 342 13 0 chr5 3139334 3139413 -199946119 - L2 LINE L2 0 3272 3193 191 349 0 0 chr5 3139772 3139838 -199945694 - L2 LINE L2 0 3313 3248 1377 211 41 64 chr5 3140207 3140643 -199944889 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr5 3142377 3142400 -199943132 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 3144693 3144722 -199940810 + GC_rich Low_complexity Low_complexity 1 29 0 297 237 8 42 chr5 3147758 3147937 -199937595 + G-rich Low_complexity Low_complexity 1 172 0 248 275 0 0 chr5 3148008 3148077 -199937455 + C-rich Low_complexity Low_complexity 2 70 0 200 111 28 0 chr5 3148277 3148313 -199937219 + (CCG)n Simple_repeat Simple_repeat 2 38 0 39 100 0 0 chr5 3148340 3148470 -199937062 + GC_rich Low_complexity Low_complexity 1 130 0 192 40 0 0 chr5 3148680 3148705 -199936827 + (CCG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 3148800 3148821 -199936711 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 3148929 3148960 -199936572 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 3151068 3151096 -199934436 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 3151130 3151151 -199934381 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 3151213 3151262 -199934270 + GC_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr5 3151545 3151572 -199933960 + GC_rich Low_complexity Low_complexity 1 27 0 359 164 0 16 chr5 3152557 3152618 -199932914 + L1MC4 LINE L1 6644 6703 -1339 208 162 27 0 chr5 3152619 3152656 -199932876 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 198 0 0 0 chr5 3153120 3153142 -199932390 + (A)n Simple_repeat Simple_repeat 1 22 0 450 0 0 0 chr5 3155768 3155818 -199929714 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 3156338 3156373 -199929159 + GC_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr5 3156502 3156539 -199928993 + GC_rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr5 3157262 3157302 -199928230 + AT_rich Low_complexity Low_complexity 1 40 0 1024 225 61 58 chr5 3162876 3163529 -199922003 - Zaphod DNA AcHobo -20 4011 736 921 140 136 9 chr5 3164238 3164459 -199921073 - L1MC2 LINE L1 0 6344 6096 259 224 0 15 chr5 3164652 3164719 -199920813 - MER53 DNA DNA -120 69 4 1628 180 27 24 chr5 3168780 3169074 -199916458 - AluJo SINE Alu -13 299 5 219 148 16 33 chr5 3170108 3170169 -199915363 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 336 48 0 0 chr5 3170441 3170483 -199915049 + (CA)n Simple_repeat Simple_repeat 2 43 0 211 358 100 0 chr5 3171085 3171205 -199914327 + L2 LINE L2 3133 3264 -8 209 289 107 71 chr5 3172197 3172394 -199913138 - MIR SINE MIR -45 217 14 28 0 0 0 chr5 3173096 3173124 -199912408 + AT_rich Low_complexity Low_complexity 1 28 0 1953 131 0 38 chr5 3176115 3176405 -199909127 + AluSx SINE Alu 1 279 -33 210 71 0 0 chr5 3176407 3176435 -199909097 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr5 3177280 3177303 -199908229 + AT_rich Low_complexity Low_complexity 1 23 0 1471 157 80 44 chr5 3181827 3181981 -199903551 - THE1C LTR MaLR -12 416 269 288 0 0 0 chr5 3181981 3182013 -199903519 + (GA)n Simple_repeat Simple_repeat 1 32 0 1471 157 80 44 chr5 3182013 3182186 -199903346 - THE1C LTR MaLR -159 269 9 315 83 0 21 chr5 3182186 3182234 -199903298 - THE1B LTR MaLR -317 47 1 500 266 137 78 chr5 3182303 3182724 -199902808 - MLT1D LTR MaLR -2 465 27 238 286 12 12 chr5 3182860 3182944 -199902588 + CT-rich Low_complexity Low_complexity 4 87 0 801 236 34 0 chr5 3183443 3183621 -199901911 - MLT1G LTR MaLR -13 577 394 1572 216 18 9 chr5 3183621 3183955 -199901577 + MLT2C1 LTR ERVL 1 337 -60 453 153 201 49 chr5 3183955 3184099 -199901433 - MER4A LTR ERV1 0 465 300 1916 125 38 60 chr5 3184139 3184524 -199901008 - MER4A LTR ERV1 -240 357 2 271 242 15 0 chr5 3184776 3184842 -199900690 - MLT1G LTR MaLR -57 533 467 * 371 337 28 17 chr5 3184838 3185019 -199900513 - MLT1G LTR MaLR -407 183 1 26 0 0 0 chr5 3185527 3185553 -199899979 + AT_rich Low_complexity Low_complexity 1 26 0 627 308 97 21 chr5 3186391 3186898 -199898634 - MLT1G LTR MaLR 0 590 18 216 0 0 0 chr5 3186996 3187020 -199898512 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 3037 155 28 6 chr5 3187353 3187856 -199897676 - MER1A DNA MER1_type 0 529 16 189 147 0 0 chr5 3187981 3188015 -199897517 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 260 369 92 18 chr5 3188018 3188346 -199897186 + L2 LINE L2 2916 3267 -5 1926 179 0 3 chr5 3188626 3188939 -199896593 + AluSx SINE Alu 1 312 0 358 302 43 2 chr5 3189569 3189703 -199895829 - MIR SINE MIR -46 162 34 223 49 49 0 chr5 3241237 3241278 -199844254 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 471 219 0 0 chr5 3242025 3242203 -199843329 + (TG)n Simple_repeat Simple_repeat 2 179 0 404 236 6 0 chr5 3242249 3242427 -199843105 + (TG)n Simple_repeat Simple_repeat 1 179 0 362 214 7 0 chr5 3242462 3242607 -199842925 + (TG)n Simple_repeat Simple_repeat 2 147 0 312 302 82 60 chr5 3244102 3244334 -199841198 - L1M4 LINE L1 -813 5333 5097 903 190 6 0 chr5 3244413 3244587 -199840945 - FRAM SINE Alu -7 169 1 22 0 0 0 chr5 3246215 3246237 -199839295 + AT_rich Low_complexity Low_complexity 1 22 0 2116 110 3 13 chr5 3246361 3246670 -199838862 + AluSx SINE Alu 1 306 -6 212 197 0 33 chr5 3247907 3247968 -199837564 + GA-rich Low_complexity Low_complexity 3 61 0 1920 163 10 7 chr5 3248454 3248760 -199836772 + AluJb SINE Alu 6 312 0 2331 87 3 13 chr5 3250023 3250335 -199835197 - AluY SINE Alu -2 309 1 2113 131 0 0 chr5 3251596 3251922 -199833610 + AluSx SINE Alu 1 326 0 181 286 0 54 chr5 3254952 3255008 -199830524 + MIR SINE MIR 95 145 -63 204 200 0 0 chr5 3255579 3255614 -199829918 - L3 LINE CR1 -994 583 549 27 0 0 0 chr5 3256526 3256553 -199828979 + AT_rich Low_complexity Low_complexity 1 27 0 285 309 51 86 chr5 3257125 3257520 -199828012 + MLT1I LTR MaLR 20 400 -9 182 150 25 0 chr5 3259649 3259689 -199825843 + (TA)n Simple_repeat Simple_repeat 1 41 0 2262 134 10 21 chr5 3259700 3260089 -199825443 + L1PA16 LINE L1 5524 5908 -258 183 80 0 0 chr5 3260089 3260114 -199825418 + (TATATG)n Simple_repeat Simple_repeat 3 27 0 960 36 61 0 chr5 3260767 3260932 -199824600 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 336 393 23 40 chr5 3261368 3261486 -199824046 + L1MC4a LINE L1 5548 5666 -2142 6921 75 6 0 chr5 3261486 3262580 -199822952 + L1PA8 LINE L1 5090 6193 0 336 393 23 40 chr5 3262580 3262814 -199822718 + L1MC4a LINE L1 5666 5895 -1913 304 318 90 42 chr5 3263982 3264171 -199821361 + L1MDa LINE L1 2441 2638 -3902 271 308 91 23 chr5 3264529 3264750 -199820782 - MER106A DNA MER1_type 0 236 1 3565 190 11 22 chr5 3264807 3265439 -199820093 - MER72 LTR ERV1 0 722 98 2216 114 3 19 chr5 3265439 3265756 -199819776 - AluSx SINE Alu 0 312 1 3565 190 11 22 chr5 3265756 3265853 -199819679 - MER72 LTR ERV1 -624 98 1 182 341 11 0 chr5 3267878 3267966 -199817566 - L2 LINE L2 -836 2478 2390 291 114 0 0 chr5 3271922 3271966 -199813566 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 346 57 0 chr5 3275026 3275155 -199810377 - MIR SINE MIR -77 131 16 2193 114 3 7 chr5 3275214 3275520 -199810012 + AluSc SINE Alu 5 309 0 437 279 33 0 chr5 3276980 3277102 -199808430 - MER63 DNA MER1_type -279 783 32 2286 110 0 3 chr5 3281571 3281870 -199803662 - AluY SINE Alu -13 298 1 2059 141 3 0 chr5 3282080 3282378 -199803154 + AluSx SINE Alu 1 299 -13 330 274 109 95 chr5 3282682 3283094 -199802438 - L2 LINE L2 -31 3241 2824 280 302 113 22 chr5 3286093 3286368 -199799164 - LTR16A1 LTR ERVL -2 455 156 243 250 0 0 chr5 3288097 3288157 -199797375 + (CA)n Simple_repeat Simple_repeat 2 61 0 291 247 28 22 chr5 3288399 3288577 -199796955 + (TA)n Simple_repeat Simple_repeat 2 180 0 360 276 57 9 chr5 3288956 3289061 -199796471 + L2 LINE L2 3203 3312 -1 290 279 7 57 chr5 3291996 3292136 -199793396 + MER115 DNA AcHobo 505 637 -56 2138 125 7 0 chr5 3293199 3293496 -199792036 - AluSx SINE Alu -13 299 1 2367 100 0 6 chr5 3293686 3294015 -199791517 + L1PA8A LINE L1 5798 6124 -7 181 268 73 49 chr5 3295241 3295323 -199790209 + MIR SINE MIR 65 148 -114 447 289 112 27 chr5 3295552 3295739 -199789793 - MIR SINE MIR 0 262 60 300 0 0 0 chr5 3296285 3296321 -199789211 + L1PA6 LINE L1 6111 6146 -8 845 209 81 0 chr5 3296337 3296548 -199788984 - MLT2C2 LTR ERVL -236 228 1 193 316 168 11 chr5 3297189 3297284 -199788248 + MER5A DNA MER1_type 10 119 -70 612 268 166 50 chr5 3297374 3297777 -199787755 + MLT1F LTR MaLR 85 534 -8 363 319 137 28 chr5 3297902 3298259 -199787273 + L2 LINE L2 2576 2971 -343 188 384 0 27 chr5 3298299 3298411 -199787121 + L2 LINE L2 3168 3276 -37 2216 92 13 10 chr5 3298588 3298893 -199786639 - AluSc SINE Alu -3 306 1 560 273 136 10 chr5 3299102 3299300 -199786232 + MER58A DNA MER1_type 1 223 -1 188 229 62 0 chr5 3301014 3301062 -199784470 + L2 LINE L2 3222 3272 0 302 276 133 0 chr5 3302495 3302600 -199782932 + L1M4 LINE L1 3039 3157 -2989 * 414 276 115 0 chr5 3302594 3302750 -199782782 + L1M4 LINE L1 3081 3254 -2892 538 266 101 38 chr5 3302850 3303117 -199782415 + L1M4 LINE L1 3579 3862 -2284 229 300 12 0 chr5 3303809 3303889 -199781643 + (TA)n Simple_repeat Simple_repeat 2 82 0 998 254 71 97 chr5 3306063 3307328 -199778204 - L1ME LINE L1 -4602 1659 371 427 341 101 23 chr5 3307522 3308088 -199777444 - L1 LINE L1 -2285 3861 3252 2828 16 0 0 chr5 3308248 3308552 -199776980 - AluYb8 SINE Alu -14 304 1 21 0 0 0 chr5 3308723 3308744 -199776788 + AT_rich Low_complexity Low_complexity 1 21 0 323 325 122 27 chr5 3308850 3309398 -199776134 - L1 LINE L1 -3381 2765 2166 384 338 55 55 chr5 3309954 3310297 -199775235 - HAL1b LINE L1 -710 638 296 1841 113 7 25 chr5 3310428 3310703 -199774829 - AluSq SINE Alu -39 274 5 284 284 61 34 chr5 3311406 3311554 -199773978 + L1ME LINE L1 5533 5684 -437 35 0 0 0 chr5 3311595 3311630 -199773902 + AT_rich Low_complexity Low_complexity 1 35 0 329 272 22 0 chr5 3311857 3311949 -199773583 - L1MC4 LINE L1 -1338 6704 6611 440 205 6 0 chr5 3312625 3312781 -199772751 + (TG)n Simple_repeat Simple_repeat 1 157 0 486 213 0 0 chr5 3312794 3312954 -199772578 + (TG)n Simple_repeat Simple_repeat 2 161 0 294 222 81 0 chr5 3312957 3313056 -199772476 + (TCTG)n Simple_repeat Simple_repeat 4 110 0 566 188 0 6 chr5 3313061 3313242 -199772290 + (TG)n Simple_repeat Simple_repeat 1 180 0 342 249 0 0 chr5 3313266 3313439 -199772093 + (TG)n Simple_repeat Simple_repeat 2 174 0 385 152 22 43 chr5 3314155 3314339 -199771193 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 306 45 18 chr5 3316807 3316918 -199768614 + MER5A DNA MER1_type 1 114 -75 2369 95 0 0 chr5 3316984 3317290 -199768242 - AluSx SINE Alu -6 306 1 405 39 0 0 chr5 3317979 3318030 -199767502 + (TC)n Simple_repeat Simple_repeat 2 52 0 926 301 36 40 chr5 3319657 3320106 -199765426 - MLT1E3 LTR MaLR -12 612 166 717 207 4 0 chr5 3321772 3322042 -199763490 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 1622 272 42 27 chr5 3323995 3324542 -199760990 + MLT1H1 LTR MaLR 1 555 0 287 248 91 16 chr5 3324733 3324854 -199760678 + MIR SINE MIR 85 214 -48 1385 142 0 0 chr5 3324900 3325097 -199760435 - AluSc SINE Alu -16 293 97 5603 87 1 20 chr5 3325904 3326713 -199758819 + L1PA8A LINE L1 5331 6124 -7 504 48 0 0 chr5 3327896 3327959 -199757573 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1170 117 0 0 chr5 3327959 3328138 -199757394 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 763 133 7 14 chr5 3328143 3328286 -199757246 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 378 42 0 0 chr5 3328563 3328611 -199756921 + (CA)n Simple_repeat Simple_repeat 2 49 0 396 167 0 0 chr5 3330210 3330282 -199755250 + (TG)n Simple_repeat Simple_repeat 1 72 0 1472 201 30 0 chr5 3332129 3332433 -199753099 - MLT1B LTR MaLR -7 383 71 482 151 28 38 chr5 3332457 3332563 -199752969 - MLT1B LTR MaLR -272 118 14 342 204 39 107 chr5 3334131 3334234 -199751298 - L1ME1 LINE L1 0 6444 6349 1831 270 54 22 chr5 3334316 3336657 -199748875 - L1ME1 LINE L1 -77 6369 3561 231 184 20 0 chr5 3336656 3336705 -199748827 + L1MCc LINE L1 823 872 -5551 * 220 327 98 19 chr5 3337642 3337725 -199747807 - MIR SINE MIR -40 222 147 192 77 0 0 chr5 3337725 3337751 -199747781 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 220 327 98 19 chr5 3337751 3337872 -199747660 - MIR SINE MIR -115 147 2 313 319 55 40 chr5 3339821 3340094 -199745438 - L1ME1 LINE L1 -3518 2908 2632 278 319 85 11 chr5 3340179 3340367 -199745165 + LTR33 LTR ERVL 15 216 -305 2015 152 3 0 chr5 3340590 3340887 -199744645 - AluJb SINE Alu -14 298 1 359 306 126 0 chr5 3341072 3341278 -199744254 - L1ME1 LINE L1 -3981 2445 2214 2035 137 3 0 chr5 3342248 3342540 -199742992 + AluSq SINE Alu 1 293 -20 3580 65 9 2 chr5 3342877 3343338 -199742194 - L1PA8 LINE L1 -1 6171 5708 295 237 50 101 chr5 3346160 3346299 -199739233 + LTR33A LTR ERVL 61 192 -331 2371 32 43 11 chr5 3347665 3347975 -199737557 - AluY SINE Alu 0 311 3 249 108 0 0 chr5 3349520 3349557 -199735975 + (A)n Simple_repeat Simple_repeat 1 37 0 358 211 62 62 chr5 3350783 3350911 -199734621 - L1ME4a LINE L1 0 6121 5994 460 353 56 71 chr5 3353831 3354635 -199730897 + L1ME2 LINE L1 376 1167 -5554 373 251 74 82 chr5 3354734 3355124 -199730408 + L1ME2 LINE L1 1262 1648 -4892 246 222 0 0 chr5 3355154 3355208 -199730324 + GA-rich Low_complexity Low_complexity 1 54 0 253 262 84 61 chr5 3355215 3355478 -199730054 + L1ME2 LINE L1 1675 1943 -4597 306 299 11 92 chr5 3355562 3355736 -199729796 + L1ME2 LINE L1 2019 2178 -4362 302 256 78 11 chr5 3355904 3355994 -199729538 + L1ME2 LINE L1 2345 2440 -4281 421 293 58 10 chr5 3355996 3356328 -199729204 + L1ME2 LINE L1 2399 2749 -3791 796 172 55 43 chr5 3356367 3356530 -199729002 + FRAM SINE Alu 1 156 -20 367 235 10 10 chr5 3356530 3356628 -199728904 + L1ME2 LINE L1 5564 5661 -879 227 237 23 8 chr5 3356631 3356762 -199728770 + (TA)n Simple_repeat Simple_repeat 2 134 0 2085 288 51 22 chr5 3356771 3357610 -199727922 + L1ME2 LINE L1 5683 6549 -9 363 223 157 16 chr5 3359180 3359301 -199726231 - L2 LINE L2 0 3313 3176 301 270 92 58 chr5 3359437 3359934 -199725598 - MLT1F LTR MaLR -90 452 2 408 245 90 58 chr5 3360005 3360160 -199725372 - MIR SINE MIR -17 245 86 195 280 118 11 chr5 3362068 3362161 -199723371 - L2 LINE L2 -145 3127 3025 1683 125 131 41 chr5 3362860 3363204 -199722328 + THE1C LTR MaLR 1 375 0 1682 195 13 10 chr5 3364003 3364311 -199721221 - AluJb SINE Alu -3 309 1 449 289 84 4 chr5 3365340 3365589 -199719943 - Charlie5 DNA MER1_type 0 2620 2352 448 246 27 77 chr5 3365588 3365771 -199719761 - Charlie5 DNA MER1_type -2413 199 26 * 194 180 0 60 chr5 3367066 3367166 -199718366 + (CA)n Simple_repeat Simple_repeat 1 94 0 433 257 6 39 chr5 3367231 3367410 -199718122 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 272 16 38 chr5 3367583 3367767 -199717765 + (CA)n Simple_repeat Simple_repeat 1 180 0 315 256 0 0 chr5 3368666 3368756 -199716776 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 932 183 7 0 chr5 3368772 3369068 -199716464 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 180 176 0 0 chr5 3369086 3369120 -199716412 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 809 185 6 0 chr5 3369140 3369313 -199716219 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 351 0 0 0 chr5 3369631 3369670 -199715862 + (TG)n Simple_repeat Simple_repeat 2 40 0 702 187 49 76 chr5 3372569 3372794 -199712738 + MER20 DNA MER1_type 1 219 0 188 326 167 0 chr5 3372973 3373105 -199712427 + MIR SINE MIR 103 256 -6 302 123 37 25 chr5 3373215 3373296 -199712236 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1520 225 77 64 chr5 3374347 3374813 -199710719 + MLT1H1 LTR MaLR 16 491 -64 2080 135 14 0 chr5 3374813 3375109 -199710423 - AluSx SINE Alu -12 300 1 1520 225 77 64 chr5 3375109 3375175 -199710357 + MLT1H1 LTR MaLR 491 555 0 363 318 19 7 chr5 3375319 3375473 -199710059 + MER112 DNA MER1_type 97 252 -8 407 213 7 0 chr5 3376732 3376873 -199708659 + (TG)n Simple_repeat Simple_repeat 1 142 0 759 176 0 2 chr5 3376890 3377494 -199708038 + (TG)n Simple_repeat Simple_repeat 1 602 0 701 175 4 0 chr5 3377507 3377765 -199707767 + (TG)n Simple_repeat Simple_repeat 1 259 0 194 365 73 10 chr5 3380382 3380478 -199705054 - MIR SINE MIR -159 103 2 5294 168 21 10 chr5 3380705 3381738 -199703794 - L1MA6 LINE L1 0 6300 5256 443 266 35 53 chr5 3381738 3381907 -199703625 + MER5B DNA MER1_type 8 173 -5 1946 193 29 60 chr5 3381983 3382180 -199703352 + MER82 DNA MER2_type 1 203 -450 2125 160 30 0 chr5 3382180 3382518 -199703014 + MER7A DNA MER2_type 1 346 0 1946 193 29 60 chr5 3382518 3382801 -199702731 + MER82 DNA MER2_type 203 466 -187 698 211 18 4 chr5 3382839 3383307 -199702225 + (CA)n Simple_repeat Simple_repeat 1 474 0 587 159 34 28 chr5 3383290 3383466 -199702066 + (CATA)n Simple_repeat Simple_repeat 2 178 0 * 642 274 93 13 chr5 3384162 3384472 -199701060 + MER93b LTR ERV1 39 373 0 1638 195 139 0 chr5 3386369 3386743 -199698789 - MSTA LTR MaLR -2 426 1 2275 80 35 0 chr5 3387134 3387421 -199698111 + AluSp SINE Alu 1 297 -16 2210 119 13 0 chr5 3388539 3388842 -199696690 + AluSx SINE Alu 1 307 -5 541 239 16 38 chr5 3390728 3390912 -199694620 + L1MA10 LINE L1 6108 6287 -47 1432 229 38 15 chr5 3394138 3394478 -199691054 + MER7A DNA MER2_type 1 346 0 360 298 44 73 chr5 3394547 3394766 -199690766 - MIR SINE MIR -34 228 19 423 0 0 0 chr5 3394978 3395025 -199690507 + (TG)n Simple_repeat Simple_repeat 2 48 0 32 43 0 0 chr5 3395330 3395376 -199690156 + AT_rich Low_complexity Low_complexity 1 46 0 316 57 0 38 chr5 3396157 3396210 -199689322 + (TCCCG)n Simple_repeat Simple_repeat 3 53 0 591 127 25 0 chr5 3396233 3396351 -199689181 + CT-rich Low_complexity Low_complexity 3 123 0 1645 100 8 34 chr5 3396359 3396598 -199688934 - AluSg/x SINE Alu -6 306 74 581 185 0 22 chr5 3396959 3397143 -199688389 + CT-rich Low_complexity Low_complexity 1 180 0 228 294 0 0 chr5 3397807 3397926 -199687606 + (CA)n Simple_repeat Simple_repeat 1 119 0 195 299 28 47 chr5 3397973 3398080 -199687452 + L2 LINE L2 1831 1935 -1379 343 247 0 0 chr5 3399060 3399141 -199686391 - MLT1D LTR MaLR 0 505 425 196 222 97 28 chr5 3399267 3399339 -199686193 - MIR SINE MIR -97 165 89 852 203 0 0 chr5 3399394 3399735 -199685797 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 765 194 0 0 chr5 3399755 3399925 -199685607 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 902 181 0 3 chr5 3399943 3400308 -199685224 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1146 188 0 0 chr5 3400328 3400675 -199684857 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 214 280 40 0 chr5 3401378 3401428 -199684104 + MER5B DNA MER1_type 125 176 -2 2372 81 0 0 chr5 3401520 3401830 -199683702 - AluY SINE Alu -1 310 1 324 284 193 25 chr5 3403522 3403765 -199681767 - L2 LINE L2 -1242 2072 1789 228 309 118 58 chr5 3404191 3404537 -199680995 - L2 LINE L2 -1758 1556 1190 221 273 191 22 chr5 3404613 3404844 -199680688 - L2 LINE L2 -2311 1003 734 1990 122 0 0 chr5 3406713 3407000 -199678532 + AluSx SINE Alu 11 297 -15 1771 147 0 10 chr5 3407367 3407660 -199677872 + AluJb SINE Alu 1 290 -22 2492 110 31 8 chr5 3409148 3409504 -199676028 - THE1B LTR MaLR 0 364 1 1071 224 113 36 chr5 3409577 3409912 -199675620 - MLT1A1 LTR MaLR -2 363 3 403 253 121 91 chr5 3410197 3410537 -199674995 - MLT1I LTR MaLR 0 409 60 226 271 17 0 chr5 3410644 3410703 -199674829 - MIR SINE MIR -171 91 32 1713 191 34 8 chr5 3413052 3413408 -199672124 + MLT1A1 LTR MaLR 1 365 0 303 298 116 56 chr5 3413597 3413795 -199671737 + L1M4 LINE L1 3770 3979 -2167 266 288 34 20 chr5 3413927 3414073 -199671459 + L1M4 LINE L1 4128 4275 -1871 27 29 0 0 chr5 3414634 3414668 -199670864 + AT_rich Low_complexity Low_complexity 1 34 0 1113 163 128 0 chr5 3414677 3414935 -199670597 - MER33 DNA MER1_type -1 323 33 475 327 24 6 chr5 3415374 3415542 -199669990 + MIR SINE MIR 46 216 -46 250 250 0 0 chr5 3416756 3416812 -199668720 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 82 0 0 chr5 3417379 3417428 -199668104 + AT_rich Low_complexity Low_complexity 1 49 0 1186 239 34 34 chr5 3417578 3417934 -199667598 - MLT1A2 LTR MaLR 0 374 19 23 0 0 0 chr5 3419560 3419583 -199665949 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 3419991 3420012 -199665520 + (TAA)n Simple_repeat Simple_repeat 2 22 0 407 306 19 19 chr5 3420014 3420171 -199665361 - MIR SINE MIR -11 251 95 297 276 14 55 chr5 3420306 3420451 -199665081 + (CATG)n Simple_repeat Simple_repeat 1 139 0 214 406 6 6 chr5 3420513 3420688 -199664844 + (CA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr5 3421911 3421933 -199663599 + AT_rich Low_complexity Low_complexity 1 22 0 950 180 6 0 chr5 3422003 3422195 -199663337 - AluSx SINE Alu 0 313 121 568 176 0 0 chr5 3422231 3422322 -199663210 - AluSx SINE Alu -180 133 43 261 358 84 28 chr5 3425135 3425314 -199660218 + L3 LINE CR1 1246 1434 -143 897 211 40 44 chr5 3425636 3425863 -199659669 - ORSL DNA AcHobo -14 261 36 331 307 35 9 chr5 3427117 3427231 -199658301 - L1M4 LINE L1 -846 5798 5682 533 267 87 46 chr5 3427267 3427353 -199658179 - L1MEc LINE L1 -1784 4860 4779 1828 163 0 0 chr5 3427353 3427653 -199657879 - AluSx SINE Alu -12 300 1 533 267 87 46 chr5 3427653 3427761 -199657771 - L1MEc LINE L1 -1865 4779 4658 319 295 27 54 chr5 3427793 3428129 -199657403 - L1MEc LINE L1 -2063 4581 4255 619 244 93 136 chr5 3428135 3428396 -199657136 - L1MEc LINE L1 -2610 4034 3764 222 37 0 0 chr5 3428396 3428423 -199657109 + (TC)n Simple_repeat Simple_repeat 2 28 0 619 244 93 136 chr5 3428423 3428783 -199656749 - L1MEc LINE L1 -2880 3764 3472 4313 56 9 0 chr5 3428783 3429321 -199656211 + L1PA5 LINE L1 5612 6154 0 619 244 93 136 chr5 3429321 3429746 -199655786 - L1MEc LINE L1 -3172 3472 3031 1834 138 17 3 chr5 3429746 3430035 -199655497 + AluSq SINE Alu 1 293 -20 857 232 103 21 chr5 3430141 3430520 -199655012 - L1MEc LINE L1 -3940 2706 2297 1226 198 154 31 chr5 3430636 3430954 -199654578 - MLT1A1 LTR MaLR 0 365 9 357 144 36 18 chr5 3430954 3431065 -199654467 + (TA)n Simple_repeat Simple_repeat 2 114 0 5172 249 46 36 chr5 3431065 3433115 -199652417 - L1M4 LINE L1 -4565 2081 5 242 264 100 27 chr5 3433133 3433243 -199652289 - L1MEc LINE L1 -4766 2059 1942 284 298 53 11 chr5 3433389 3433483 -199652049 + MER20B DNA MER1_type 62 159 -624 2105 111 0 0 chr5 3435624 3435922 -199649610 + AluSg SINE Alu 1 298 -12 295 245 11 21 chr5 3437386 3437480 -199648052 + CT-rich Low_complexity Low_complexity 2 94 0 1085 239 77 11 chr5 3438749 3439100 -199646432 + MLT1A2 LTR MaLR 1 374 0 623 254 172 67 chr5 3439226 3439674 -199645858 - L1ME4a LINE L1 -6 6115 5621 2258 92 7 0 chr5 3441753 3442059 -199643473 - AluY SINE Alu -3 308 1 407 348 13 25 chr5 3442191 3442349 -199643183 - MIR SINE MIR -52 210 55 677 251 67 5 chr5 3442394 3442589 -199642943 - MER20 DNA MER1_type -5 214 8 187 255 0 43 chr5 3442876 3442923 -199642609 + L3 LINE CR1 642 686 -891 2506 96 19 25 chr5 3443342 3443708 -199641824 + THE1B LTR MaLR 1 364 0 253 260 53 60 chr5 3444012 3444162 -199641370 - MIR SINE MIR -54 208 60 27 0 0 0 chr5 3445807 3445834 -199639698 + AT_rich Low_complexity Low_complexity 1 27 0 1260 206 29 29 chr5 3450054 3450399 -199635133 - MLT1C LTR MaLR -42 425 81 243 269 0 0 chr5 3450573 3450703 -199634829 + (CA)n Simple_repeat Simple_repeat 1 130 0 183 184 0 0 chr5 3450721 3450759 -199634773 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 * 282 292 0 0 chr5 3450732 3450910 -199634622 + (CA)n Simple_repeat Simple_repeat 1 178 0 435 38 0 0 chr5 3452161 3452214 -199633318 + (TG)n Simple_repeat Simple_repeat 2 54 0 237 33 0 0 chr5 3454285 3454315 -199631217 + (CA)n Simple_repeat Simple_repeat 1 30 0 285 81 0 0 chr5 3455579 3455616 -199629916 - tRNA-Gly-GGA tRNA tRNA -38 37 1 720 176 0 2 chr5 3456033 3456639 -199628893 + (TG)n Simple_repeat Simple_repeat 1 604 0 725 150 0 6 chr5 3456658 3456825 -199628707 + (TG)n Simple_repeat Simple_repeat 2 167 0 328 267 19 0 chr5 3457631 3457736 -199627796 - L2 LINE L2 -8 3305 3199 30 27 0 0 chr5 3457819 3457856 -199627676 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 3458095 3458123 -199627409 + AT_rich Low_complexity Low_complexity 1 28 0 278 213 16 16 chr5 3458372 3458433 -199627099 + MER81 DNA DNA 54 114 0 238 327 89 12 chr5 3458822 3459070 -199626462 + L1M4 LINE L1 4949 5215 -931 1010 209 87 0 chr5 3459602 3459798 -199625734 + MER58A DNA MER1_type 1 213 -11 1881 194 65 7 chr5 3460494 3460897 -199624635 + MER95 LTR ERV 6 431 0 412 283 62 24 chr5 3461086 3461480 -199624052 - LTR16A LTR ERVL -1 449 2 2138 138 0 0 chr5 3462102 3462400 -199623132 + AluSx SINE Alu 1 298 -14 247 241 0 0 chr5 3462592 3462646 -199622886 - L1M4 LINE L1 -1324 4822 4769 2220 95 20 10 chr5 3464098 3464394 -199621138 + AluSq SINE Alu 1 299 -14 2522 61 0 26 chr5 3464416 3464727 -199620805 - AluY SINE Alu -7 304 2 192 135 0 0 chr5 3464879 3464916 -199620616 + (TG)n Simple_repeat Simple_repeat 1 37 0 214 378 33 0 chr5 3465034 3465185 -199620347 - L3 LINE CR1 -864 713 558 2379 73 7 3 chr5 3466028 3466328 -199619204 + AluY SINE Alu 1 301 -10 1117 243 49 27 chr5 3467796 3468163 -199617369 - MER96B DNA MER1_type? -4 413 39 435 240 21 0 chr5 3468163 3468259 -199617273 + MLT1C LTR MaLR 1 98 -369 2103 197 47 11 chr5 3468259 3468731 -199616801 + L1MA6 LINE L1 5483 5971 -329 258 81 0 0 chr5 3469361 3469398 -199616134 + (TG)n Simple_repeat Simple_repeat 2 38 0 1417 225 38 3 chr5 3472847 3473194 -199612338 - L1MB4 LINE L1 -1 6179 5821 848 169 6 0 chr5 3474211 3474389 -199611143 + (ATG)n Simple_repeat Simple_repeat 2 180 0 737 202 6 0 chr5 3474420 3474778 -199610754 + (ATG)n Simple_repeat Simple_repeat 1 360 0 213 196 0 0 chr5 3474794 3474840 -199610692 + (ATG)n Simple_repeat Simple_repeat 1 46 0 230 0 33 0 chr5 3476897 3476927 -199608605 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 350 259 95 41 chr5 3477205 3477481 -199608051 + L1ME LINE L1 958 1260 -5156 2496 38 10 0 chr5 3477481 3477773 -199607759 + AluY SINE Alu 1 295 -16 350 259 95 41 chr5 3477773 3477863 -199607669 + L1ME LINE L1 1260 1344 -5072 240 188 50 38 chr5 3477864 3477944 -199607588 + L1ME LINE L1 1247 1327 -5099 2094 143 10 0 chr5 3479883 3480177 -199605355 + AluSx SINE Alu 1 297 -15 186 43 0 0 chr5 3483960 3483983 -199601549 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 416 259 131 27 chr5 3485634 3485667 -199599865 - MER5C DNA MER1_type 0 324 296 362 21 21 0 chr5 3485667 3485714 -199599818 + (TG)n Simple_repeat Simple_repeat 2 49 0 416 259 131 27 chr5 3485714 3485939 -199599593 - MER5C DNA MER1_type -28 296 39 234 260 65 53 chr5 3487239 3487395 -199598137 + MIR3 SINE MIR 4 159 -63 342 315 100 0 chr5 3487784 3487914 -199597618 + MIR3 SINE MIR 18 160 -48 217 217 0 0 chr5 3489611 3489657 -199595875 - L2 LINE L2 -1 3312 3267 25 65 0 0 chr5 3490218 3490264 -199595268 + AT_rich Low_complexity Low_complexity 1 46 0 4815 254 91 25 chr5 3490335 3492367 -199593165 + L1ME LINE L1 2358 4476 -1950 468 287 134 18 chr5 3493487 3493710 -199591822 - MIR SINE MIR 0 262 14 1861 127 0 0 chr5 3493863 3494108 -199591424 - AluSq SINE Alu -64 249 5 2127 120 0 13 chr5 3494762 3495071 -199590461 - AluSx SINE Alu -7 305 1 3939 166 22 40 chr5 3497098 3497881 -199587651 - LTR1 LTR ERV1 0 785 17 186 71 0 0 chr5 3499641 3499669 -199585863 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 614 229 32 0 chr5 3499795 3499982 -199585550 - L1MB3 LINE L1 -219 5952 5747 2034 137 0 16 chr5 3500008 3500315 -199585217 + AluSc SINE Alu 1 302 -7 557 118 0 0 chr5 3500233 3500318 -199585214 + AluSc SINE Alu 221 305 -4 2268 177 46 15 chr5 3506067 3506542 -199578990 - L1M2 LINE L1 -500 5812 5323 457 244 105 26 chr5 3506560 3506868 -199578664 - L1MCa LINE L1 -3862 2564 2221 1870 140 58 0 chr5 3506868 3506984 -199578548 + AluSx SINE Alu 2 110 -202 222 37 0 0 chr5 3506984 3507011 -199578521 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1870 140 58 0 chr5 3507011 3507172 -199578360 + AluSx SINE Alu 110 295 -17 457 244 105 26 chr5 3507172 3507244 -199578288 - L1MCa LINE L1 -4205 2221 2156 317 260 135 10 chr5 3507245 3507349 -199578183 - L1 LINE L1 -944 5202 5086 834 179 5 58 chr5 3507354 3507454 -199578078 + L1 LINE L1 5171 5275 -871 2034 152 10 0 chr5 3507454 3507751 -199577781 + AluSx SINE Alu 1 300 -12 834 179 5 58 chr5 3507751 3507873 -199577659 + L1 LINE L1 5275 5381 -765 1803 163 30 3 chr5 3507873 3508205 -199577327 - MER6 DNA MER2_type 0 865 265 466 248 185 57 chr5 3508205 3508243 -199577289 - L1MCa LINE L1 -5992 434 402 1376 158 153 78 chr5 3508243 3508590 -199576942 + THE1C LTR MaLR 1 373 -2 466 248 185 57 chr5 3508590 3508918 -199576614 - L1MCa LINE L1 -6024 402 21 1986 144 48 17 chr5 3508987 3509342 -199576190 + MER47A DNA MER2_type 1 366 0 186 43 0 0 chr5 3509806 3509829 -199575703 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2154 107 0 0 chr5 3509831 3510103 -199575429 - AluSc SINE Alu -37 272 1 2197 132 28 25 chr5 3511130 3511485 -199574047 - THE1B LTR MaLR 0 364 9 11455 94 19 11 chr5 3511493 3512823 -199572709 - THE1B-int LTR MaLR 0 1580 235 2221 79 0 0 chr5 3512823 3513090 -199572442 - AluY SINE Alu -18 293 27 11455 94 19 11 chr5 3513090 3513327 -199572205 - THE1B-int LTR MaLR -1345 235 1 2407 123 36 22 chr5 3513328 3513686 -199571846 - THE1B LTR MaLR -1 363 1 222 91 0 0 chr5 3515544 3515577 -199569955 + (TCC)n Simple_repeat Simple_repeat 2 34 0 319 111 0 0 chr5 3516544 3516589 -199568943 - THE1B LTR MaLR 0 428 384 1012 87 24 0 chr5 3516589 3516716 -199568816 + AluSq/x SINE Alu 1 130 -182 204 326 84 0 chr5 3517342 3517437 -199568095 + MER5A DNA MER1_type 4 106 -83 182 320 100 10 chr5 3518212 3518312 -199567220 + L2 LINE L2 3150 3258 -14 418 226 0 57 chr5 3518412 3518536 -199566996 - MIR SINE MIR -56 206 90 242 265 39 29 chr5 3521098 3521200 -199564332 + HAL1 LINE L1 769 871 -1636 531 250 5 75 chr5 3521200 3521412 -199564120 + MER3 DNA MER1_type 13 209 0 368 367 29 0 chr5 3521447 3521586 -199563946 + HAL1 LINE L1 1678 1820 -687 442 207 8 43 chr5 3521632 3521898 -199563634 + GA-rich Low_complexity Low_complexity 1 256 0 215 77 0 26 chr5 3522017 3522056 -199563476 + (TG)n Simple_repeat Simple_repeat 2 39 0 276 209 88 0 chr5 3522432 3522523 -199563009 + MER5A DNA MER1_type 26 124 -65 476 296 110 36 chr5 3524443 3525146 -199560386 - L2 LINE L2 -188 3125 2370 289 271 74 25 chr5 3528841 3528963 -199556569 - LTR68 LTR ERV1 -606 134 7 185 0 0 39 chr5 3530202 3530228 -199555304 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 1538 214 30 32 chr5 3532597 3532970 -199552562 + MLT1A2 LTR MaLR 3 374 0 432 245 91 22 chr5 3533011 3533211 -199552321 - MLT1H LTR MaLR -294 255 1 4781 201 49 19 chr5 3533255 3533847 -199551685 - L1MC2 LINE L1 -9 6335 5762 2044 128 34 0 chr5 3533847 3534143 -199551389 + AluSx SINE Alu 1 306 -6 4781 201 49 19 chr5 3534143 3534851 -199550681 - L1MC2 LINE L1 -582 5762 4985 527 248 14 7 chr5 3534878 3535019 -199550513 - MER69A DNA AcHobo -33 144 3 513 0 0 0 chr5 3536281 3536338 -199549194 + (TC)n Simple_repeat Simple_repeat 2 58 0 375 23 0 0 chr5 3536337 3536381 -199549151 + (TA)n Simple_repeat Simple_repeat 1 44 0 * 2437 149 19 9 chr5 3536389 3536708 -199548824 - L1PA16 LINE L1 -21 6145 5820 2375 138 5 22 chr5 3536708 3537078 -199548454 + THE1B LTR MaLR 1 364 0 2437 149 19 9 chr5 3537078 3537180 -199548352 - L1PA16 LINE L1 -346 5820 5720 1837 105 23 11 chr5 3539135 3539401 -199546131 - AluSq SINE Alu -12 301 33 183 186 0 0 chr5 3540826 3540869 -199544663 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 3535 80 2 0 chr5 3540899 3541360 -199544172 + L1PA5 LINE L1 5691 6152 -2 2581 83 9 0 chr5 3541360 3541701 -199543831 + L1PA8 LINE L1 5814 6166 -6 424 343 17 14 chr5 3544884 3545249 -199540283 + (TG)n Simple_repeat Simple_repeat 1 366 0 267 208 60 77 chr5 3545202 3545385 -199540147 + (CATG)n Simple_repeat Simple_repeat 1 180 0 * 345 331 23 17 chr5 3545362 3545534 -199539998 + (TG)n Simple_repeat Simple_repeat 2 174 0 2193 104 0 7 chr5 3546584 3546906 -199538626 - AluSq SINE Alu 0 313 1 399 188 12 47 chr5 3547304 3547389 -199538143 - MER5A DNA MER1_type -83 106 25 277 346 115 6 chr5 3548181 3548337 -199537195 - MER5B DNA MER1_type -3 175 3 202 196 39 0 chr5 3548897 3548948 -199536584 + A-rich Low_complexity Low_complexity 4 56 0 2978 266 31 35 chr5 3549390 3550950 -199534582 + L1MA7 LINE L1 1 1672 -4609 9412 201 44 10 chr5 3550953 3553496 -199532036 + L1MA7 LINE L1 2902 5608 -771 1914 170 40 37 chr5 3553496 3553897 -199531635 + L1MA7 LINE L1 6094 6495 0 9412 201 44 10 chr5 3553897 3553915 -199531617 + L1MA7 LINE L1 5608 5624 -755 199 269 30 0 chr5 3554168 3554235 -199531297 - L2 LINE L2 -219 3053 2985 284 317 45 60 chr5 3554659 3555012 -199530520 - L2 LINE L2 -927 2387 2040 243 261 0 14 chr5 3555320 3555389 -199530143 + GA-rich Low_complexity Low_complexity 2 69 0 361 301 120 32 chr5 3556160 3556376 -199529156 - MIR SINE MIR -6 256 22 2047 248 70 14 chr5 3556414 3556971 -199528561 - MLT1E LTR MaLR -5 588 1 726 148 22 44 chr5 3557241 3557376 -199528156 - FLAM_C SINE Alu -10 133 2 216 234 0 0 chr5 3559465 3559512 -199526020 - L2 LINE L2 -7 3265 3219 215 91 0 23 chr5 3562232 3562276 -199523256 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1159 244 75 49 chr5 3562616 3563067 -199522465 - MLT1C LTR MaLR -4 463 1 235 248 91 25 chr5 3563163 3563284 -199522248 - L1M4 LINE L1 -1528 4854 4726 698 160 92 23 chr5 3563332 3563463 -199522069 + THE1C LTR MaLR 1 140 -235 2847 174 8 4 chr5 3563490 3564001 -199521531 + HSMAR2 DNA Mariner 169 681 -621 228 117 33 17 chr5 3564065 3564125 -199521407 + (TA)n Simple_repeat Simple_repeat 2 62 0 998 215 59 19 chr5 3564149 3564405 -199521127 - L1MA9 LINE L1 -39 6273 6008 * 1598 276 82 68 chr5 3564402 3565014 -199520518 - L1M4 LINE L1 -3884 2500 1898 1991 142 0 4 chr5 3565014 3565295 -199520237 + AluSx SINE Alu 3 282 -30 1598 276 82 68 chr5 3565295 3565857 -199519675 - L1M4 LINE L1 -4486 1898 1345 2008 154 0 0 chr5 3565857 3566150 -199519382 - AluSx SINE Alu -19 293 1 1598 276 82 68 chr5 3566150 3566704 -199518828 - L1M4 LINE L1 -5039 1345 747 6756 253 67 12 chr5 3567274 3568872 -199516660 + L1PA13 LINE L1 1 1685 -5896 8504 229 27 21 chr5 3568897 3571124 -199514408 + L1PA13 LINE L1 2473 4723 -2861 2230 119 0 6 chr5 3571124 3571436 -199514096 + AluSx SINE Alu 1 310 -2 8504 229 27 21 chr5 3571436 3571750 -199513782 + L1PA13 LINE L1 4723 5034 -2550 8453 196 16 10 chr5 3571772 3574247 -199511285 + L1PA13 LINE L1 5120 7601 0 261 266 25 0 chr5 3575245 3575324 -199510208 + MIR SINE MIR 72 152 -56 1628 224 83 25 chr5 3576443 3576889 -199508643 - MER63C DNA MER1_type -213 717 246 1450 214 31 13 chr5 3578185 3578568 -199506964 + MLT1B LTR MaLR 1 390 0 410 284 14 20 chr5 3581450 3581598 -199503934 + (CATA)n Simple_repeat Simple_repeat 4 150 0 359 339 6 22 chr5 3581548 3581731 -199503801 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 408 328 0 23 chr5 3581743 3581914 -199503618 + (CA)n Simple_repeat Simple_repeat 2 168 0 2374 83 47 39 chr5 3581963 3582324 -199503208 + THE1B LTR MaLR 1 364 0 879 217 77 5 chr5 3582708 3582929 -199502603 + MLT1A1 LTR MaLR 129 365 0 23 0 0 0 chr5 3583637 3583660 -199501872 + AT_rich Low_complexity Low_complexity 1 23 0 548 261 22 0 chr5 3583843 3583981 -199501551 + MER58A DNA MER1_type 37 177 -47 305 221 132 42 chr5 3584654 3584844 -199500688 + LTR33A LTR ERVL 268 474 -49 1378 193 27 24 chr5 3587391 3587687 -199497845 + AluJo SINE Alu 1 297 -15 375 328 8 0 chr5 3587695 3587829 -199497703 - HAL1 LINE L1 -125 2382 2248 267 31 0 0 chr5 3587854 3587886 -199497646 + (CA)n Simple_repeat Simple_repeat 1 32 0 486 270 0 0 chr5 3589311 3589489 -199496043 + (CA)n Simple_repeat Simple_repeat 2 179 0 1999 138 165 8 chr5 3590632 3591002 -199494530 + MSTA LTR MaLR 1 428 0 1000 154 32 6 chr5 3591030 3591186 -199494346 + FRAM SINE Alu 1 157 -19 2162 123 0 3 chr5 3591345 3591645 -199493887 - AluSc SINE Alu -9 300 2 198 311 75 81 chr5 3591978 3592139 -199493393 + L3b LINE CR1 1344 1503 -80 2302 118 52 6 chr5 3593072 3593420 -199492112 - THE1B LTR MaLR 0 364 1 1995 55 4 12 chr5 3595319 3595574 -199489958 - L1P3 LINE L1 -533 5621 5369 1450 98 0 0 chr5 3595574 3595767 -199489765 + L1PA7 LINE L1 5960 6153 -1 4453 209 120 72 chr5 3596092 3598464 -199487068 + L1MD1 LINE L1 19 2277 -4263 1524 184 29 7 chr5 3598464 3598741 -199486791 + AluJb SINE Alu 3 285 -27 225 65 0 0 chr5 3598748 3598779 -199486753 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4453 209 120 72 chr5 3598779 3598871 -199486661 + L1MD1 LINE L1 2282 2680 -3860 3449 211 65 59 chr5 3598879 3599920 -199485612 + L1MD1 LINE L1 4974 6008 -628 2413 68 0 7 chr5 3599920 3600237 -199485295 - AluY SINE Alu 0 311 2 3449 211 65 59 chr5 3600237 3600264 -199485268 + L1MD1 LINE L1 6008 6033 -603 2220 177 32 20 chr5 3600264 3600523 -199485009 - MER65A LTR ERV1 0 445 177 315 0 0 0 chr5 3600523 3600558 -199484974 + (TG)n Simple_repeat Simple_repeat 1 35 0 2220 177 32 20 chr5 3600558 3600738 -199484794 - MER65A LTR ERV1 -268 177 1 3449 211 65 59 chr5 3600738 3601230 -199484302 + L1MD1 LINE L1 6033 6531 -105 2720 30 7 0 chr5 3601230 3601532 -199484000 + AluY SINE Alu 1 304 -7 3449 211 65 59 chr5 3601532 3601590 -199483942 + L1MD1 LINE L1 6531 6587 -49 210 37 0 0 chr5 3602784 3602811 -199482721 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 216 0 0 0 chr5 3602810 3602834 -199482698 + (GA)n Simple_repeat Simple_repeat 2 25 0 323 163 12 0 chr5 3602933 3603013 -199482519 + (CA)n Simple_repeat Simple_repeat 2 82 0 213 204 23 23 chr5 3603032 3603120 -199482412 + (CA)n Simple_repeat Simple_repeat 2 89 0 672 252 9 51 chr5 3603683 3603897 -199481635 - MER101 LTR ERV1 -19 455 251 405 248 152 21 chr5 3604069 3604214 -199481318 - MER101 LTR ERV1 -302 172 9 421 213 31 55 chr5 3604473 3604600 -199480932 - MER5A DNA MER1_type -2 187 64 2384 100 3 0 chr5 3604828 3605129 -199480403 - AluSx SINE Alu -10 302 1 2440 70 0 13 chr5 3605558 3605859 -199479673 + AluY SINE Alu 1 297 -14 771 251 26 11 chr5 3606957 3607148 -199478384 + MLT1B LTR MaLR 195 388 -2 312 27 0 0 chr5 3608020 3608057 -199477475 + (TG)n Simple_repeat Simple_repeat 1 37 0 2199 112 6 34 chr5 3608553 3608874 -199476658 - AluSx SINE Alu 0 312 1 327 226 13 7 chr5 3612531 3612686 -199472846 + GA-rich Low_complexity Low_complexity 1 156 0 184 333 69 0 chr5 3613943 3614015 -199471517 + MIR SINE MIR 116 192 -70 318 204 68 116 chr5 3615726 3615873 -199469659 - MLT1B LTR MaLR -246 144 5 318 296 99 62 chr5 3617112 3617355 -199468177 + L1MC/D LINE L1 5456 5707 -2101 520 244 125 0 chr5 3618078 3618238 -199467294 + MER31B LTR ERV1 2 181 -285 1135 233 94 36 chr5 3618648 3619086 -199466446 + MER101 LTR ERV1 12 474 0 5239 149 18 6 chr5 3620713 3621942 -199463590 - L1PA15 LINE L1 -21 6144 4902 1245 193 7 15 chr5 3621933 3622203 -199463329 + L1PA15 LINE L1 4619 4886 -1260 * 459 174 6 56 chr5 3623464 3623642 -199461890 + GA-rich Low_complexity Low_complexity 1 169 0 2316 91 7 0 chr5 3623652 3623950 -199461582 + AluSq SINE Alu 13 312 -1 200 260 100 0 chr5 3624243 3624293 -199461239 - MER5A DNA MER1_type -5 184 130 1614 180 4 0 chr5 3624483 3624795 -199460737 - AluJb SINE Alu 0 312 33 1899 171 84 3 chr5 3625041 3625432 -199460100 + MSTB LTR MaLR 4 426 0 2398 237 33 32 chr5 3627175 3627867 -199457665 + L1MD2 LINE L1 5473 6165 -194 248 320 21 10 chr5 3627871 3627968 -199457564 + (CA)n Simple_repeat Simple_repeat 1 98 0 473 302 0 39 chr5 3627985 3628167 -199457365 + (CA)n Simple_repeat Simple_repeat 1 175 0 375 197 26 0 chr5 3628172 3628248 -199457284 + L1MD2 LINE L1 6139 6216 -143 291 296 61 0 chr5 3628356 3628471 -199457061 + L1MD2 LINE L1 6230 6351 -8 1838 134 3 24 chr5 3628477 3628768 -199456764 - AluSg1 SINE Alu -14 295 11 804 216 0 2 chr5 3632740 3633192 -199452340 + (CCCA)n Simple_repeat Simple_repeat 1 450 0 318 204 68 116 chr5 3635058 3635205 -199450327 - MLT1B LTR MaLR -246 144 5 324 298 99 58 chr5 3636444 3636686 -199448846 + L1MC/D LINE L1 5456 5707 -2101 520 244 125 0 chr5 3637409 3637569 -199447963 + MER31B LTR ERV1 2 181 -285 1135 233 94 36 chr5 3637979 3638417 -199447115 + MER101 LTR ERV1 12 474 0 5309 149 16 6 chr5 3640045 3641276 -199444256 - L1PA15 LINE L1 -21 6144 4902 1245 193 7 15 chr5 3641267 3641537 -199443995 + L1PA15 LINE L1 4619 4886 -1260 * 463 209 19 19 chr5 3642796 3642954 -199442578 + A-rich Low_complexity Low_complexity 5 162 0 225 233 0 50 chr5 3642955 3642987 -199442545 + GA-rich Low_complexity Low_complexity 4 33 -27 2316 91 7 0 chr5 3642987 3643285 -199442247 + AluSq SINE Alu 13 312 -1 225 233 0 50 chr5 3643285 3643312 -199442220 + GA-rich Low_complexity Low_complexity 33 60 0 200 260 100 0 chr5 3643578 3643628 -199441904 - MER5A DNA MER1_type -5 184 130 1614 180 4 0 chr5 3643818 3644130 -199441402 - AluJb SINE Alu 0 312 33 1899 171 84 3 chr5 3644376 3644767 -199440765 + MSTB LTR MaLR 4 426 0 2425 234 33 32 chr5 3646510 3647202 -199438330 + L1MD2 LINE L1 5473 6165 -194 237 320 21 10 chr5 3647206 3647303 -199438229 + (CA)n Simple_repeat Simple_repeat 1 98 0 441 311 0 39 chr5 3647320 3647500 -199438032 + (CA)n Simple_repeat Simple_repeat 1 173 0 382 197 26 0 chr5 3647505 3647581 -199437951 + L1MD2 LINE L1 6139 6216 -143 319 278 61 0 chr5 3647689 3647804 -199437728 + L1MD2 LINE L1 6230 6351 -8 1798 132 3 31 chr5 3647810 3648099 -199437433 - AluSg1 SINE Alu -18 291 11 803 196 0 6 chr5 3652070 3652249 -199433283 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 219 300 17 0 chr5 3652249 3652309 -199433223 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 330 106 0 0 chr5 3654607 3654654 -199430878 + Alu SINE Alu 1 47 -261 354 128 0 0 chr5 3654666 3654729 -199430803 + Alu SINE Alu 1 47 -255 2209 92 7 0 chr5 3654755 3655038 -199430494 + AluSx SINE Alu 1 285 -27 222 274 186 18 chr5 3655948 3656061 -199429471 + MIR SINE MIR 13 144 -118 2176 133 0 0 chr5 3656687 3656988 -199428544 + AluSg SINE Alu 1 301 -9 2838 110 19 19 chr5 3657931 3658357 -199427175 + L1PA11 LINE L1 5746 6171 -3 550 194 10 0 chr5 3658378 3658476 -199427056 + FLAM_A SINE Alu 12 110 -32 309 26 0 0 chr5 3658478 3658516 -199427016 + (TC)n Simple_repeat Simple_repeat 1 38 0 378 107 0 0 chr5 3658518 3658574 -199426958 + (GGA)n Simple_repeat Simple_repeat 3 58 0 317 237 13 0 chr5 3660006 3660082 -199425450 + MER103 DNA DNA 8 84 -82 462 274 7 28 chr5 3660722 3660930 -199424602 + C-rich Low_complexity Low_complexity 1 203 0 714 226 73 29 chr5 3662334 3662649 -199422883 + MLT1A1 LTR MaLR 4 354 -36 25 0 0 0 chr5 3663259 3663284 -199422248 + AT_rich Low_complexity Low_complexity 1 25 0 2272 112 128 13 chr5 3663669 3664053 -199421479 - MSTA LTR MaLR 0 428 1 23 54 0 0 chr5 3664185 3664222 -199421310 + AT_rich Low_complexity Low_complexity 1 37 0 1988 211 42 68 chr5 3664340 3664984 -199420548 - MER63C DNA MER1_type -303 627 1 329 335 62 40 chr5 3664987 3665163 -199420369 + L1M4 LINE L1 3742 3921 -2225 277 261 23 0 chr5 3665610 3665698 -199419834 + L1M4 LINE L1 4137 4226 -1920 2316 109 0 6 chr5 3666089 3666402 -199419130 - AluSq SINE Alu -2 311 1 228 143 0 0 chr5 3666425 3666467 -199419065 + (T)n Simple_repeat Simple_repeat 1 42 0 21 36 0 0 chr5 3666880 3666908 -199418624 + AT_rich Low_complexity Low_complexity 1 28 0 299 276 57 57 chr5 3667340 3667452 -199418080 - L1ME4a LINE L1 -158 5963 5852 4839 95 6 13 chr5 3667452 3668139 -199417393 - L1PA8A LINE L1 -4 6127 5446 299 276 57 57 chr5 3668139 3668309 -199417223 - L1ME4a LINE L1 -268 5853 5681 23 0 0 0 chr5 3669056 3669079 -199416453 + AT_rich Low_complexity Low_complexity 1 23 0 200 309 0 0 chr5 3669455 3669552 -199415980 + (GGATG)n Simple_repeat Simple_repeat 1 97 0 399 41 0 0 chr5 3670055 3670104 -199415428 + (GA)n Simple_repeat Simple_repeat 2 50 0 231 245 0 0 chr5 3673134 3673228 -199412304 + (CA)n Simple_repeat Simple_repeat 2 95 0 558 246 2 0 chr5 3676090 3676673 -199408859 + (CA)n Simple_repeat Simple_repeat 1 584 0 247 237 0 0 chr5 3676800 3676859 -199408673 + (TG)n Simple_repeat Simple_repeat 2 60 0 310 274 11 11 chr5 3676860 3676955 -199408577 + (CA)n Simple_repeat Simple_repeat 2 96 0 225 322 35 0 chr5 3676974 3677061 -199408471 + MIR3 SINE MIR 82 171 -37 357 187 0 0 chr5 3677188 3677263 -199408269 + (CA)n Simple_repeat Simple_repeat 1 75 0 201 241 0 0 chr5 3677336 3677390 -199408142 + (CA)n Simple_repeat Simple_repeat 1 54 0 231 356 11 0 chr5 3677542 3677632 -199407900 + (CACG)n Simple_repeat Simple_repeat 1 91 0 210 286 0 18 chr5 3677943 3677999 -199407533 + GA-rich Low_complexity Low_complexity 2 56 0 32 75 0 0 chr5 3678167 3678234 -199407298 + AT_rich Low_complexity Low_complexity 1 67 0 303 28 0 0 chr5 3678701 3678737 -199406795 + (CA)n Simple_repeat Simple_repeat 1 36 0 263 272 54 17 chr5 3680807 3681065 -199404467 + MLT1A1 LTR MaLR 48 363 -11 203 333 29 0 chr5 3683820 3683889 -199401643 - L2 LINE L2 -16 3297 3227 1534 253 98 48 chr5 3684242 3684826 -199400706 + L1MCb LINE L1 717 1270 -5475 405 0 0 0 chr5 3684826 3684871 -199400661 + (CA)n Simple_repeat Simple_repeat 2 46 0 1534 253 98 48 chr5 3684871 3685938 -199399594 + L1MCb LINE L1 1270 2732 -4013 323 135 0 0 chr5 3685964 3686016 -199399516 - MLT2B1 LTR ERVL 0 520 469 305 258 32 21 chr5 3686041 3686134 -199399398 + L1MC4 LINE L1 6615 6708 -1334 * 315 178 19 122 chr5 3686094 3686201 -199399331 - L1MC4 LINE L1 -1333 6709 6614 12075 85 14 12 chr5 3686366 3688045 -199397487 - HERVL LTR ERVL -429 5225 3545 456 326 63 40 chr5 3688069 3688612 -199396920 + L1MEc LINE L1 1714 2268 -4128 1073 149 5 0 chr5 3688732 3688933 -199396599 - L1P LINE L1 -3603 2543 2342 7545 194 9 32 chr5 3688934 3691269 -199394263 + L1PA14 LINE L1 3813 6159 -2 1289 130 5 9 chr5 3691269 3691484 -199394048 + L1MA4A LINE L1 5772 5985 -318 1411 126 10 0 chr5 3691536 3691734 -199393798 - AluSc SINE Alu -5 304 105 265 306 41 54 chr5 3692156 3692303 -199393229 + MIR SINE MIR 102 246 -16 280 230 10 10 chr5 3692305 3692405 -199393127 + CT-rich Low_complexity Low_complexity 3 102 0 1679 199 30 60 chr5 3692654 3693056 -199392476 + MLT1B LTR MaLR 1 390 0 275 200 0 0 chr5 3694495 3694545 -199390987 - Alu SINE Alu -250 50 1 823 205 18 0 chr5 3694545 3694716 -199390816 + L1MA4A LINE L1 6059 6232 -71 238 92 46 62 chr5 3696153 3696218 -199389314 + L1PA16 LINE L1 6100 6163 -3 1714 249 133 26 chr5 3696722 3697457 -199388075 + L1ME2 LINE L1 46 757 -5288 2326 96 3 0 chr5 3697496 3697798 -199387734 + AluSg SINE Alu 4 306 -4 222 297 47 0 chr5 3698719 3698783 -199386749 + MER5A DNA MER1_type 35 101 -88 23 0 0 0 chr5 3698836 3698859 -199386673 + AT_rich Low_complexity Low_complexity 1 23 0 187 320 126 0 chr5 3701794 3701897 -199383635 - L3 LINE CR1 -551 1026 911 355 303 123 20 chr5 3704029 3704224 -199381308 + L3 LINE CR1 773 987 -590 2116 129 3 7 chr5 3704811 3705113 -199380419 - AluSx SINE Alu -11 301 1 25 0 0 0 chr5 3706335 3706360 -199379172 + AT_rich Low_complexity Low_complexity 1 25 0 200 79 105 0 chr5 3708516 3708554 -199376978 + MER5B DNA MER1_type 3 44 -134 237 333 29 10 chr5 3711721 3711823 -199373709 - MIR SINE MIR -79 183 80 459 229 0 8 chr5 3712018 3712140 -199373392 + L1ME2 LINE L1 3131 3251 -3313 1541 262 135 18 chr5 3712153 3713185 -199372347 + L1ME2 LINE L1 4895 6043 -541 911 247 83 43 chr5 3713605 3714091 -199371441 + L1ME2 LINE L1 6032 6535 -47 198 327 101 24 chr5 3714901 3715069 -199370463 - MIR SINE MIR -73 189 9 1047 236 57 20 chr5 3715666 3715963 -199369569 - MER54B LTR ERVL 0 793 486 214 91 0 45 chr5 3717101 3717145 -199368387 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 826 180 8 0 chr5 3717959 3718316 -199367216 + (TCCA)n Simple_repeat Simple_repeat 1 360 0 795 177 12 0 chr5 3718333 3718588 -199366944 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 489 219 0 0 chr5 3718600 3718714 -199366818 + (TCCA)n Simple_repeat Simple_repeat 2 115 0 316 307 34 0 chr5 3718714 3718802 -199366730 - L2 LINE L2 0 3313 3223 23 0 0 0 chr5 3719155 3719178 -199366354 + AT_rich Low_complexity Low_complexity 1 23 0 2164 82 43 0 chr5 3720802 3721083 -199364449 + AluY SINE Alu 1 293 -18 210 203 17 17 chr5 3721981 3722040 -199363492 + GA-rich Low_complexity Low_complexity 3 61 0 227 240 91 109 chr5 3722525 3722700 -199362832 - MIR SINE MIR -25 183 1 374 91 0 0 chr5 3724488 3724543 -199360989 - MLT2A2 LTR ERVL 0 453 399 224 169 70 28 chr5 3724547 3724689 -199360843 + (TA)n Simple_repeat Simple_repeat 1 148 0 235 167 19 0 chr5 3724633 3724687 -199360845 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2147 126 10 0 chr5 3725664 3725966 -199359566 - AluSx SINE Alu -7 305 1 427 315 34 7 chr5 3728948 3729094 -199356438 - MIR SINE MIR -46 216 67 505 259 79 41 chr5 3729264 3729689 -199355843 - MLT1D LTR MaLR -17 450 1 269 252 145 23 chr5 3730642 3730773 -199354759 + MLT1L LTR MaLR 237 419 -128 479 222 19 0 chr5 3732768 3732876 -199352656 + HY1 scRNA scRNA 1 110 -2 683 74 0 54 chr5 3733069 3733218 -199352314 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 632 323 76 56 chr5 3733455 3733879 -199351653 + HAL1b LINE L1 4 354 -994 348 127 0 0 chr5 3733879 3733934 -199351598 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 404 281 90 36 chr5 3733935 3734102 -199351430 + HAL1b LINE L1 339 514 -834 732 290 72 28 chr5 3735043 3735585 -199349947 - L1MEc LINE L1 -3207 2922 2357 2293 109 0 13 chr5 3735629 3735942 -199349590 - AluSg SINE Alu -1 309 1 665 321 79 44 chr5 3735999 3736760 -199348772 - L1MEc LINE L1 -3890 2239 1436 285 256 25 113 chr5 3736863 3737066 -199348466 - L1MEc LINE L1 -4862 1257 1073 335 224 82 112 chr5 3737067 3737263 -199348269 - L1MEc LINE L1 -5100 1019 830 621 200 0 0 chr5 3737269 3737404 -199348128 + FRAM SINE Alu 38 172 0 314 288 73 110 chr5 3737404 3737623 -199347909 - L1MEc LINE L1 -5306 813 603 23 0 0 0 chr5 3737879 3737902 -199347630 + AT_rich Low_complexity Low_complexity 1 23 0 1160 166 5 0 chr5 3737902 3738107 -199347425 - L1PB1 LINE L1 -1 6150 5945 3042 167 22 8 chr5 3738172 3739245 -199346287 + L1M1 LINE L1 4688 5780 -523 * 5877 206 8 5 chr5 3739243 3740562 -199344970 - L1P LINE L1 -2314 3832 2509 2937 92 5 2 chr5 3740662 3741087 -199344445 - L1PA7 LINE L1 -72 6082 5657 1324 42 0 12 chr5 3744042 3744208 -199341324 - L1PA5 LINE L1 -1 6153 5990 2173 30 0 0 chr5 3744208 3744472 -199341060 + L1PA5 LINE L1 5710 5973 -182 184 306 40 40 chr5 3746552 3746676 -199338856 - L2 LINE L2 -11 3261 3138 333 0 0 0 chr5 3748733 3748770 -199336762 + (T)n Simple_repeat Simple_repeat 1 37 0 8514 212 56 74 chr5 3954019 3954310 -199131222 - L1MA6 LINE L1 -237 7482 7187 892 233 165 45 chr5 3954310 3954576 -199130956 - AluJb SINE Alu -4 298 1 8514 212 56 74 chr5 3954576 3956001 -199129531 - L1MA6 LINE L1 -532 7187 5737 1793 162 7 10 chr5 3956001 3956297 -199129235 - AluSx SINE Alu -17 295 1 8514 212 56 74 chr5 3956297 3957999 -199127533 - L1MA6 LINE L1 -1982 5737 4005 1451 131 40 33 chr5 3957999 3958273 -199127259 - AluSq SINE Alu -7 306 31 8514 212 56 74 chr5 3958273 3958374 -199127158 - L1MA6 LINE L1 -3714 4005 3904 244 250 0 0 chr5 3958374 3958434 -199127098 - AluS SINE Alu -241 60 1 8514 212 56 74 chr5 3958434 3960567 -199124965 - L1MA6 LINE L1 -3815 3904 1884 258 393 28 7 chr5 3960668 3960928 -199124604 - L1M3a LINE L1 -5227 728 357 276 341 52 12 chr5 3961050 3961339 -199124193 - L1M3a LINE L1 -5196 759 541 1030 311 39 30 chr5 3961394 3961970 -199123562 - L1M3a LINE L1 -5195 760 2 254 314 161 0 chr5 3962234 3962352 -199123180 + L1MEc LINE L1 37 173 -6223 1352 296 44 2 chr5 3962748 3963204 -199122328 + LTR16C LTR ERVL 2 476 -15 819 245 61 32 chr5 3964240 3964518 -199121014 - MLT1F1 LTR MaLR 0 567 282 181 320 31 21 chr5 3964838 3964935 -199120597 + MIR3 SINE MIR 101 198 -10 732 215 55 100 chr5 3966424 3966805 -199118727 - L1MD1 LINE L1 -12 6230 5867 625 157 9 0 chr5 3967091 3967199 -199118333 - MLT1B LTR MaLR -3 387 279 1033 248 158 25 chr5 3967944 3968380 -199117152 + MLT1D LTR MaLR 12 505 0 238 343 35 14 chr5 3969228 3969371 -199116161 - MIR SINE MIR -81 181 36 477 0 0 0 chr5 3969486 3969539 -199115993 + (CA)n Simple_repeat Simple_repeat 2 54 0 261 0 0 0 chr5 3969581 3969610 -199115922 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr5 3969652 3969689 -199115843 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 3969689 3969714 -199115818 + (A)n Simple_repeat Simple_repeat 1 25 0 2469 52 0 29 chr5 3971095 3971401 -199114131 - AluY SINE Alu -14 297 1 1353 149 117 25 chr5 3971403 3971684 -199113848 - AluY SINE Alu -4 307 1 999 78 8 0 chr5 3971703 3971832 -199113700 - AluY SINE Alu -181 130 1 964 88 0 0 chr5 3972812 3972948 -199112584 + L1PA14 LINE L1 6023 6158 -3 302 257 57 9 chr5 3974957 3975062 -199110470 - MIR SINE MIR -12 250 141 21 0 0 0 chr5 3976608 3976629 -199108903 + AT_rich Low_complexity Low_complexity 1 21 0 2158 119 3 0 chr5 3977841 3978136 -199107396 - AluSx SINE Alu -16 296 1 231 217 0 0 chr5 3979380 3979440 -199106092 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 310 0 49 chr5 3979926 3980110 -199105422 + G-rich Low_complexity Low_complexity 2 176 0 239 231 52 35 chr5 3980189 3980362 -199105170 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 394 144 0 76 chr5 3980655 3980773 -199104759 + AluSq/x SINE Alu 8 116 -187 25 65 0 0 chr5 3984206 3984252 -199101280 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr5 3984818 3984853 -199100679 + (CA)n Simple_repeat Simple_repeat 2 36 0 262 214 230 16 chr5 3985424 3985550 -199099982 - MIR SINE MIR -43 219 67 2415 81 0 0 chr5 3985955 3986252 -199099280 - AluY SINE Alu -14 297 1 267 286 36 27 chr5 3987071 3987183 -199098349 + MIR SINE MIR 17 129 -133 2222 120 10 0 chr5 3987209 3987517 -199098015 - AluSp SINE Alu -2 311 1 218 245 0 0 chr5 3988462 3988511 -199097021 - MIR SINE MIR -13 249 201 358 298 8 8 chr5 3988866 3988990 -199096542 - MER5B DNA MER1_type -49 129 6 5648 182 56 10 chr5 3990206 3990725 -199094807 + Tigger3b DNA MER2_type 13 507 -2521 180 0 0 0 chr5 3990725 3990745 -199094787 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5648 182 56 10 chr5 3990745 3990766 -199094766 + Tigger3b DNA MER2_type 507 526 -2502 2350 119 0 0 chr5 3990766 3991078 -199094454 + AluSx SINE Alu 1 312 0 5648 182 56 10 chr5 3991078 3991702 -199093830 + Tigger3b DNA MER2_type 526 1231 0 1619 46 0 0 chr5 3992037 3992234 -199093298 - L1PA5 LINE L1 0 6154 5958 291 252 84 35 chr5 3992261 3992404 -199093128 - L1ME LINE L1 -450 5671 5522 27 0 0 0 chr5 3992601 3992628 -199092904 + AT_rich Low_complexity Low_complexity 1 27 0 199 239 0 0 chr5 3993312 3993358 -199092174 - MIR SINE MIR -111 151 106 7435 156 26 2 chr5 3993555 3995543 -199089989 - L1PA14 LINE L1 -214 5947 3919 200 83 0 28 chr5 3995543 3995579 -199089953 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7067 26 0 1 chr5 3995579 3996386 -199089146 - L1PA3 LINE L1 -24 6131 5326 6487 34 0 0 chr5 3996383 3997157 -199088375 + L1PA3 LINE L1 4559 5332 -814 * 3957 167 17 21 chr5 3997151 3997344 -199088188 - L1PA14 LINE L1 -2221 3925 3733 * 2295 100 7 0 chr5 3997344 3997643 -199087889 - AluSg SINE Alu -9 301 1 3957 167 17 21 chr5 3997643 3998197 -199087335 - L1PA14 LINE L1 -2413 3733 3181 314 264 241 62 chr5 3998310 3999005 -199086527 - L1M2 LINE L1 -4300 2096 1297 234 0 0 0 chr5 3999169 3999195 -199086337 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 286 52 28 chr5 3999288 3999536 -199085996 - L1ME LINE L1 -5262 808 555 2133 168 32 8 chr5 4000089 4000469 -199085063 - MLT1B LTR MaLR -1 389 1 938 314 99 8 chr5 4000469 4001118 -199084414 + L2 LINE L2 1916 2716 -598 394 282 41 9 chr5 4001152 4001372 -199084160 + L1ME3 LINE L1 4382 4608 -1538 789 62 0 23 chr5 4001380 4001508 -199084024 + (TG)n Simple_repeat Simple_repeat 2 126 0 225 0 0 0 chr5 4001675 4001700 -199083832 + (CA)n Simple_repeat Simple_repeat 2 26 0 978 258 98 43 chr5 4001706 4002449 -199083083 + L1ME3 LINE L1 5121 5921 -241 184 346 80 16 chr5 4002489 4002677 -199082855 + L2 LINE L2 2826 3025 -288 398 313 33 0 chr5 4002694 4002844 -199082688 + L2 LINE L2 3141 3295 -18 241 321 68 21 chr5 4004331 4004521 -199081011 + L2 LINE L2 2881 3079 -234 256 276 67 29 chr5 4004645 4004750 -199080782 + L2 LINE L2 3201 3309 -4 1318 213 135 19 chr5 4006329 4006743 -199078789 + MLT1C LTR MaLR 5 466 -1 255 119 45 15 chr5 4009912 4009979 -199075553 + GA-rich Low_complexity Low_complexity 1 69 0 4106 211 40 34 chr5 4011239 4011275 -199074257 + L1M3 LINE L1 4213 4247 -1936 189 74 0 0 chr5 4011275 4011302 -199074230 + (CA)n Simple_repeat Simple_repeat 1 27 0 4106 211 40 34 chr5 4011302 4012659 -199072873 + L1M3 LINE L1 4247 5613 -570 939 177 0 0 chr5 4012681 4012828 -199072704 + FRAM SINE Alu 6 152 -24 468 91 0 0 chr5 4012837 4012903 -199072629 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 249 33 0 0 chr5 4013749 4013779 -199071753 + (TG)n Simple_repeat Simple_repeat 1 30 0 1726 168 3 18 chr5 4013925 4014211 -199071321 - AluJo SINE Alu -30 282 1 2094 119 0 17 chr5 4021624 4021926 -199063606 - AluSx SINE Alu -15 297 1 1564 218 78 43 chr5 4022067 4022385 -199063147 - MLT1D LTR MaLR 0 505 163 2179 125 0 0 chr5 4022385 4022674 -199062858 - AluSx SINE Alu -23 289 1 1564 218 78 43 chr5 4022674 4022842 -199062690 - MLT1D LTR MaLR -342 163 2 262 371 34 0 chr5 4023220 4023309 -199062223 + L2 LINE L2 3165 3256 -16 430 254 14 14 chr5 4023499 4023637 -199061895 + L2 LINE L2 3175 3312 -1 4206 106 23 2 chr5 4023783 4024386 -199061146 - L1PB2 LINE L1 -114 6037 5422 1043 216 5 10 chr5 4024391 4024595 -199060937 - AluJo SINE Alu -26 286 84 2295 108 0 0 chr5 4024981 4025276 -199060256 + AluSg SINE Alu 1 295 -15 43966 34 18 2 chr5 4027285 4033335 -199052197 + L1PA3 LINE L1 1 6155 0 22 0 0 0 chr5 4033409 4033431 -199052101 + AT_rich Low_complexity Low_complexity 1 22 0 1037 291 40 2 chr5 4033446 4033896 -199051636 + L1M4 LINE L1 4138 4604 -1542 665 175 7 0 chr5 4033906 4034043 -199051489 + (ATG)n Simple_repeat Simple_repeat 1 138 0 255 170 0 0 chr5 4034153 4034200 -199051332 + (ATG)n Simple_repeat Simple_repeat 1 47 0 862 271 116 32 chr5 4034237 4034516 -199051016 + L1M4 LINE L1 4647 4901 -1245 207 0 0 0 chr5 4034516 4034539 -199050993 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 862 271 116 32 chr5 4034539 4034846 -199050686 + L1M4 LINE L1 4901 5282 -864 645 243 34 28 chr5 4035500 4035677 -199049855 - MER20 DNA MER1_type -31 188 11 254 169 34 17 chr5 4036586 4036645 -199048887 + MLT1K LTR MaLR 184 243 -345 341 21 0 21 chr5 4036963 4037010 -199048522 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1298 214 21 32 chr5 4037014 4037299 -199048233 - AluJo SINE Alu -30 282 1 461 198 8 0 chr5 4037347 4037473 -199048059 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 274 0 16 chr5 4037501 4037563 -199047969 - MIR3 SINE MIR -29 179 119 2226 125 0 22 chr5 4037894 4038213 -199047319 + AluSx SINE Alu 1 312 0 392 312 36 84 chr5 4038647 4039003 -199046529 + L3 LINE CR1 1207 1545 -32 291 209 186 0 chr5 4039163 4039249 -199046283 + LTR16A LTR ERVL 242 343 -107 186 349 16 0 chr5 4040087 4040150 -199045382 - MIR3 SINE MIR -3 205 142 216 0 0 0 chr5 4041192 4041216 -199044316 + (T)n Simple_repeat Simple_repeat 1 24 0 565 198 132 56 chr5 4046417 4046614 -199038918 + MER20 DNA MER1_type 7 218 -1 200 32 32 0 chr5 4047164 4047173 -199038359 + (CAA)n Simple_repeat Simple_repeat 2 9 -24 2058 133 0 25 chr5 4047173 4047489 -199038043 + AluSx SINE Alu 1 308 -4 200 32 32 0 chr5 4047489 4047510 -199038022 + (CAA)n Simple_repeat Simple_repeat 9 33 0 225 0 0 0 chr5 4051599 4051624 -199033908 + (T)n Simple_repeat Simple_repeat 1 25 0 596 253 122 90 chr5 4053085 4054733 -199030799 + L1ME1 LINE L1 497 2210 -4186 2120 139 3 3 chr5 4054733 4055043 -199030489 - AluSx SINE Alu -2 310 1 596 253 122 90 chr5 4055043 4055203 -199030329 + L1ME1 LINE L1 2210 2363 -4033 279 169 67 0 chr5 4055209 4055298 -199030234 + (TA)n Simple_repeat Simple_repeat 1 95 0 3586 261 99 43 chr5 4055325 4056647 -199028885 + L1ME1 LINE L1 2861 4108 -2127 222 37 0 0 chr5 4056647 4056674 -199028858 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1838 143 34 0 chr5 4056682 4056948 -199028584 - AluSx SINE Alu -32 280 6 3586 261 99 43 chr5 4056948 4057168 -199028364 + L1ME1 LINE L1 4114 4320 -1915 1235 259 61 5 chr5 4057168 4057543 -199027989 - MSTD LTR MaLR 0 396 1 3586 261 99 43 chr5 4057543 4059083 -199026449 + L1ME1 LINE L1 4320 6131 -104 2541 271 65 31 chr5 4059467 4061399 -199024133 + L1MEc LINE L1 2019 3985 -2230 364 236 32 13 chr5 4061681 4061838 -199023694 + L1MEc LINE L1 2924 3083 -3132 * 573 264 31 23 chr5 4061818 4062079 -199023453 + L1MEc LINE L1 4223 4485 -1730 1357 257 104 48 chr5 4062182 4062739 -199022793 + L1ME3 LINE L1 4228 4753 -1409 186 103 0 0 chr5 4062739 4062768 -199022764 + (CA)n Simple_repeat Simple_repeat 2 30 0 1357 257 104 48 chr5 4062768 4063836 -199021696 + L1ME3 LINE L1 4753 5938 -224 4618 22 2 4 chr5 4064239 4064784 -199020748 - L1PA4 LINE L1 -19 6136 5593 21 0 0 0 chr5 4064789 4064810 -199020722 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr5 4065165 4065195 -199020337 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 69 0 3 chr5 4065978 4066269 -199019263 - L1PA7 LINE L1 0 6154 5865 2789 93 37 0 chr5 4066269 4066698 -199018834 + L1P LINE L1 3443 3887 -2259 25 0 0 0 chr5 4066733 4066758 -199018774 + AT_rich Low_complexity Low_complexity 1 25 0 2361 86 0 10 chr5 4067203 4067504 -199018028 - AluSc SINE Alu -11 298 1 5147 19 0 0 chr5 4067856 4068468 -199017064 + L1PA3 LINE L1 5568 6179 0 212 328 23 23 chr5 4068499 4068627 -199016905 + MIR3 SINE MIR 71 198 -10 1904 93 9 102 chr5 4069215 4069537 -199015995 + AluSc SINE Alu 1 292 -17 909 203 190 7 chr5 4069569 4069859 -199015673 - MLT1B LTR MaLR -41 349 7 276 172 0 0 chr5 4069989 4070047 -199015485 + (CA)n Simple_repeat Simple_repeat 1 58 0 2502 77 0 0 chr5 4070217 4070528 -199015004 - AluY SINE Alu 0 311 1 230 300 0 29 chr5 4071128 4071198 -199014334 - L2 LINE L2 0 3313 3246 486 210 5 38 chr5 4071360 4071546 -199013986 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 369 224 21 32 chr5 4071547 4071834 -199013698 + (CA)n Simple_repeat Simple_repeat 1 283 0 333 304 8 16 chr5 4071845 4071970 -199013562 + (CA)n Simple_repeat Simple_repeat 2 125 0 240 226 23 23 chr5 4072187 4072320 -199013212 + (CATA)n Simple_repeat Simple_repeat 2 134 0 1960 208 16 33 chr5 4073489 4073519 -199012013 + L1MB5 LINE L1 5585 5614 -560 2386 125 11 24 chr5 4073519 4073888 -199011644 - THE1B LTR MaLR 0 364 1 1960 208 16 33 chr5 4073888 4074428 -199011104 + L1MB5 LINE L1 5614 6145 -29 315 219 25 12 chr5 4074467 4074627 -199010905 + CT-rich Low_complexity Low_complexity 2 163 0 1263 199 69 0 chr5 4074636 4074882 -199010650 + AluJo SINE Alu 25 287 -25 258 116 0 0 chr5 4074902 4074945 -199010587 + L1MB5 LINE L1 6126 6168 -6 183 129 0 0 chr5 4075077 4075108 -199010424 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 393 215 23 11 chr5 4076259 4076436 -199009096 + CT-rich Low_complexity Low_complexity 1 179 0 667 184 0 16 chr5 4076452 4076824 -199008708 + CT-rich Low_complexity Low_complexity 1 365 0 389 36 18 0 chr5 4078497 4078552 -199006980 + (CA)n Simple_repeat Simple_repeat 2 57 0 683 251 73 71 chr5 4080241 4080652 -199004880 - L1MD2 LINE L1 -245 6048 5637 200 245 9 0 chr5 4080674 4080780 -199004752 + (TA)n Simple_repeat Simple_repeat 1 107 0 346 279 0 0 chr5 4080781 4080867 -199004665 + L1MC4 LINE L1 6616 6701 -1341 1208 218 97 15 chr5 4080868 4081395 -199004137 - L1MD2 LINE L1 -668 5625 5071 1746 263 96 43 chr5 4081498 4082781 -199002751 - L1MD2 LINE L1 -2880 3200 1771 288 77 0 0 chr5 4082781 4082820 -199002712 + (TG)n Simple_repeat Simple_repeat 2 40 0 1746 263 96 43 chr5 4082820 4083626 -199001906 - L1MD2 LINE L1 -4309 1771 1009 794 254 57 19 chr5 4083627 4083978 -199001554 - L1MD2 LINE L1 -5180 903 540 250 322 7 33 chr5 4084044 4084196 -199001336 + L1ME1 LINE L1 278 425 -6138 462 278 82 26 chr5 4084424 4084738 -199000794 + L1ME1 LINE L1 1368 1849 -4714 234 150 0 0 chr5 4084714 4084754 -199000778 + L1ME1 LINE L1 2940 2979 -3403 * 1969 122 45 0 chr5 4084789 4085077 -199000455 + AluSq SINE Alu 1 301 -12 312 247 0 0 chr5 4085124 4085209 -199000323 + L1ME1 LINE L1 4800 4884 -1498 8208 124 22 12 chr5 4085221 4085387 -199000145 + L1PA10 LINE L1 4033 4196 -1972 1576 112 8 48 chr5 4085387 4085636 -198999896 + AluSc SINE Alu 63 301 -8 8208 124 22 12 chr5 4085636 4086802 -198998730 + L1PA10 LINE L1 4196 5382 -786 2846 13 0 0 chr5 4086802 4087115 -198998417 + AluYb8 SINE Alu 2 314 -4 8208 124 22 12 chr5 4087115 4087899 -198997633 + L1PA10 LINE L1 5382 6157 -11 21 0 0 0 chr5 4087907 4087928 -198997604 + AT_rich Low_complexity Low_complexity 1 21 0 1207 242 34 24 chr5 4087928 4088423 -198997109 + L1ME1 LINE L1 4879 5378 -1004 * 1821 198 21 7 chr5 4088421 4088846 -198996686 + L1MC3 LINE L1 7335 7765 -20 2707 228 78 24 chr5 4088871 4089847 -198995685 + L1ME1 LINE L1 5358 6398 -4 2895 13 0 0 chr5 4089852 4090170 -198995362 - AluYb8 SINE Alu 0 318 1 219 69 0 0 chr5 4091539 4091568 -198993964 + (TA)n Simple_repeat Simple_repeat 2 30 0 312 70 0 0 chr5 4092494 4092537 -198992995 + (TG)n Simple_repeat Simple_repeat 2 44 0 1066 271 12 12 chr5 4093357 4093697 -198991835 - MER58B DNA MER1_type 0 341 2 243 0 0 0 chr5 4096417 4096444 -198989088 + (A)n Simple_repeat Simple_repeat 1 27 0 551 290 70 25 chr5 4096783 4096983 -198988549 - MIR SINE MIR -3 259 51 267 161 0 0 chr5 4099411 4099467 -198986065 + (TG)n Simple_repeat Simple_repeat 1 56 0 298 256 0 13 chr5 4101049 4101127 -198984405 + GA-rich Low_complexity Low_complexity 2 78 0 186 103 0 0 chr5 4102428 4102457 -198983075 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2394 119 31 88 chr5 4103730 4104184 -198981348 - MSTA LTR MaLR 0 428 1 282 219 0 0 chr5 4107625 4107689 -198977843 + (CA)n Simple_repeat Simple_repeat 1 64 0 1322 163 23 62 chr5 4108679 4108985 -198976547 + L1MA9 LINE L1 6013 6306 -6 1233 245 71 31 chr5 4109998 4110447 -198975085 + MLT1C LTR MaLR 1 467 0 2006 130 0 3 chr5 4111876 4112175 -198973357 - AluSc SINE Alu -11 298 1 2938 192 11 5 chr5 4112289 4112861 -198972671 + L1MA8 LINE L1 5344 5918 -373 1403 197 11 28 chr5 4112969 4113253 -198972279 - MLT2B1 LTR ERVL -240 280 2 327 49 0 0 chr5 4114683 4114724 -198970808 + (CA)n Simple_repeat Simple_repeat 2 42 0 2095 114 0 7 chr5 4115766 4116072 -198969460 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr5 4116572 4116593 -198968939 + AT_rich Low_complexity Low_complexity 1 21 0 306 227 0 13 chr5 4117938 4118013 -198967519 + MER116 DNA Mariner 1 74 -6 22 0 0 0 chr5 4120074 4120096 -198965436 + AT_rich Low_complexity Low_complexity 1 22 0 651 243 82 19 chr5 4120745 4120951 -198964581 + MER20 DNA MER1_type 1 219 0 281 273 71 71 chr5 4121304 4121487 -198964045 - MIR3 SINE MIR -25 183 1 3676 29 29 43 chr5 4122018 4122502 -198963030 + L1PA6 LINE L1 5677 6153 -1 1337 166 166 36 chr5 4124955 4125287 -198960245 + THE1C LTR MaLR 1 375 0 222 286 0 0 chr5 4126827 4126876 -198958656 + L2 LINE L2 3248 3296 -17 198 171 0 0 chr5 4128364 4128405 -198957127 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 341 0 0 chr5 4128589 4128680 -198956852 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 516 303 89 62 chr5 4128950 4129333 -198956199 + L1M4 LINE L1 4157 4553 -1593 2076 129 0 0 chr5 4129333 4129636 -198955896 + AluSx SINE Alu 1 303 -9 516 303 89 62 chr5 4129636 4129668 -198955864 + L1M4 LINE L1 4553 4583 -1563 520 261 58 22 chr5 4129768 4129906 -198955626 - MIR SINE MIR -22 240 98 587 310 67 8 chr5 4133191 4133430 -198952102 - MIR SINE MIR -9 253 1 9715 179 76 56 chr5 4133803 4136296 -198949236 + L1MCa LINE L1 17 2559 -3867 1705 131 27 0 chr5 4136303 4136562 -198948970 + AluSq SINE Alu 34 299 -14 6554 172 8 26 chr5 4136569 4137723 -198947809 + L1P LINE L1 3284 4414 -1732 2071 137 0 3 chr5 4137723 4138037 -198947495 + AluSq SINE Alu 1 313 0 6554 172 8 26 chr5 4138037 4138178 -198947354 + L1P LINE L1 4414 4556 -1590 402 236 27 0 chr5 4138283 4138393 -198947139 - L1ME3 LINE L1 -318 5844 5732 1612 227 16 68 chr5 4138396 4138881 -198946651 - L1ME2 LINE L1 -306 5858 5399 731 193 47 23 chr5 4138883 4139054 -198946478 + MLT1H LTR MaLR 2 176 -373 1105 189 84 17 chr5 4139075 4139371 -198946161 - L1 LINE L1 -745 5401 5086 257 337 37 6 chr5 4139514 4139677 -198945855 - L2 LINE L2 -663 2651 2484 1821 138 97 13 chr5 4139770 4140081 -198945451 - MER1B DNA MER1_type 0 337 1 303 286 23 12 chr5 4141077 4141248 -198944284 - L1M4 LINE L1 -3136 3010 2838 * 765 179 14 0 chr5 4141247 4141387 -198944145 - L1ME2 LINE L1 -9 6155 6014 2217 108 0 0 chr5 4141623 4141928 -198943604 + AluSx SINE Alu 1 305 -7 297 281 67 76 chr5 4141933 4142157 -198943375 + MLT1J LTR MaLR 108 329 -182 1676 235 57 17 chr5 4142495 4143126 -198942406 + L1 LINE L1 4316 4990 -1156 2043 101 0 14 chr5 4143127 4143415 -198942117 + AluSc SINE Alu 1 284 -25 382 130 0 0 chr5 4143516 4143570 -198941962 + MER68 LTR ERV1 168 221 -341 1712 179 88 18 chr5 4143570 4143738 -198941794 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 4143738 4143761 -198941771 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1712 179 88 18 chr5 4143761 4143932 -198941600 + MSTB1 LTR MaLR 170 378 -54 2160 121 0 3 chr5 4143933 4144238 -198941294 - AluSx SINE Alu -7 305 2 591 203 73 0 chr5 4144241 4144364 -198941168 + MER68 LTR ERV1 431 562 0 205 338 62 33 chr5 4144408 4144648 -198940884 + L2 LINE L2 2625 2871 -443 210 253 101 40 chr5 4145615 4145714 -198939818 + L2 LINE L2 3192 3296 -17 1795 168 3 3 chr5 4145733 4146037 -198939495 + AluJb SINE Alu 1 304 -8 2343 163 46 6 chr5 4146729 4147590 -198937942 - L1M1 LINE L1 -522 5781 4885 2146 145 62 31 chr5 4148048 4148468 -198937064 + Tigger2a DNA MER2_type 2 434 0 38 68 0 0 chr5 4149071 4149144 -198936388 + GC_rich Low_complexity Low_complexity 1 73 0 256 341 0 0 chr5 4149489 4149580 -198935952 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 307 310 99 55 chr5 4149850 4150234 -198935298 + L1M4 LINE L1 4157 4557 -1589 594 112 119 0 chr5 4150235 4150378 -198935154 + AluSx SINE Alu 2 161 -151 256 149 15 30 chr5 4150644 4150711 -198934821 + GA-rich Low_complexity Low_complexity 3 68 0 232 328 0 0 chr5 4150894 4150958 -198934574 + MIR SINE MIR 45 108 -154 2933 112 18 7 chr5 4152217 4152665 -198932867 + L1PA11 LINE L1 5720 6172 -2 549 158 15 0 chr5 4152688 4152887 -198932645 + L1MA4A LINE L1 6037 6299 -4 1197 130 0 5 chr5 4154005 4154189 -198931343 + AluSg/x SINE Alu 121 303 -9 2215 90 0 10 chr5 4154192 4154492 -198931040 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 4154517 4154549 -198930983 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 4154687 4154737 -198930795 + (TA)n Simple_repeat Simple_repeat 2 50 0 1696 125 0 4 chr5 4155065 4155313 -198930219 - AluSx SINE Alu -17 295 49 1579 159 0 51 chr5 4155606 4155920 -198929612 - AluJo SINE Alu -14 298 1 219 343 71 10 chr5 4156561 4156660 -198928872 + L2 LINE L2 3162 3266 -6 2243 100 0 0 chr5 4156737 4157037 -198928495 + AluSx SINE Alu 1 300 -12 2307 89 0 0 chr5 4157599 4157903 -198927629 - AluSx SINE Alu -8 304 1 2055 178 40 40 chr5 4158802 4159197 -198926335 - LTR24C LTR ERV1 -204 431 34 1449 192 7 23 chr5 4159197 4159499 -198926033 - AluJo SINE Alu -15 297 1 2055 178 40 40 chr5 4159499 4159530 -198926002 - LTR24C LTR ERV1 -600 35 5 1023 207 81 54 chr5 4159531 4159826 -198925706 + LTR16A1 LTR ERVL 100 402 -55 183 80 0 0 chr5 4160022 4160047 -198925485 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 4160071 4160201 -198925331 - FLAM_C SINE Alu -6 127 2 2247 144 11 0 chr5 4160655 4161003 -198924529 + L1PA12 LINE L1 5569 5920 -248 2196 102 0 0 chr5 4161003 4161297 -198924235 - AluSx SINE Alu -18 294 1 1242 155 81 27 chr5 4161319 4161577 -198923955 - L1MA9 LINE L1 -8 6304 6033 512 146 42 62 chr5 4161578 4161612 -198923920 - Tigger3(Golem) DNA MER2_type -511 2518 2485 865 94 0 36 chr5 4161612 4161750 -198923782 - FLAM_C SINE Alu 0 133 1 512 146 42 62 chr5 4161750 4161842 -198923690 - Tigger3(Golem) DNA MER2_type -544 2485 2393 2087 106 3 7 chr5 4161842 4162144 -198923388 - AluSq SINE Alu -12 301 1 512 146 42 62 chr5 4162144 4162160 -198923372 - Tigger3(Golem) DNA MER2_type -636 2393 2378 293 237 32 21 chr5 4162168 4162261 -198923271 - Tigger3(Golem) DNA MER2_type -2879 150 57 1138 212 73 64 chr5 4162636 4162994 -198922538 - MLT1A2 LTR MaLR -13 361 1 2174 153 18 45 chr5 4163036 4163210 -198922322 + MLT1B LTR MaLR 1 178 -212 2477 102 123 5 chr5 4163210 4163592 -198921940 - MSTA LTR MaLR -1 427 1 2174 153 18 45 chr5 4163592 4163816 -198921716 + MLT1B LTR MaLR 178 388 -2 499 244 42 0 chr5 4163816 4163935 -198921597 + MER20 DNA MER1_type 84 207 -12 2300 97 0 0 chr5 4164202 4164511 -198921021 + AluSx SINE Alu 1 309 -3 2520 46 0 0 chr5 4164659 4164964 -198920568 + AluY SINE Alu 1 305 -6 1329 176 24 41 chr5 4165093 4165388 -198920144 - AluJo SINE Alu -22 290 1 287 297 169 17 chr5 4167120 4167238 -198918294 - L2 LINE L2 0 3272 3137 2005 129 0 3 chr5 4167627 4167922 -198917610 - AluSx SINE Alu -18 294 1 1446 211 91 21 chr5 4167934 4168318 -198917214 - MLT1C LTR MaLR -56 411 1 1690 154 58 141 chr5 4168318 4168765 -198916767 - MLT1C-int LTR MaLR 0 1371 962 1648 174 3 13 chr5 4169108 4169407 -198916125 + AluJo SINE Alu 1 296 -16 1755 181 85 30 chr5 4169605 4170041 -198915491 + MLT1C LTR MaLR 1 460 -7 2437 176 18 31 chr5 4170380 4170612 -198914920 - L1P4 LINE L1 -456 5710 5477 1811 183 0 6 chr5 4170612 4170924 -198914608 - AluJo SINE Alu -2 310 1 2437 176 18 31 chr5 4170924 4171593 -198913939 - L1P4 LINE L1 -689 5477 4823 232 189 0 38 chr5 4171810 4171863 -198913669 + CT-rich Low_complexity Low_complexity 4 54 0 1565 185 3 20 chr5 4172287 4172395 -198913137 + AluSx SINE Alu 5 113 -199 2260 107 51 23 chr5 4172395 4172749 -198912783 + THE1B LTR MaLR 1 364 0 1565 185 3 20 chr5 4172749 4172932 -198912600 + AluSx SINE Alu 113 291 -21 941 172 0 0 chr5 4173115 4173272 -198912260 + MLT1B LTR MaLR 192 348 -42 1084 216 194 14 chr5 4173376 4173741 -198911791 + MER74B LTR ERVL 192 622 0 2602 83 13 44 chr5 4173837 4174004 -198911528 + THE1C LTR MaLR 1 172 -203 2348 40 13 3 chr5 4174004 4174302 -198911230 - AluY SINE Alu -10 301 1 2602 83 13 44 chr5 4174302 4174521 -198911011 + THE1C LTR MaLR 172 375 0 1534 180 7 26 chr5 4174685 4174991 -198910541 - AluJo SINE Alu -12 300 1 1015 177 4 44 chr5 4175780 4176006 -198909526 + AluJo SINE Alu 87 303 -9 523 186 88 0 chr5 4176076 4176189 -198909343 + HAL1 LINE L1 1631 1753 -754 2089 124 3 0 chr5 4177093 4177399 -198908133 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 4177408 4177672 -198907860 - AluSx SINE Alu -11 301 42 1031 166 0 0 chr5 4178417 4178592 -198906940 + FRAM SINE Alu 1 172 -4 607 166 31 43 chr5 4178592 4178739 -198906793 - MER3 DNA MER1_type -81 128 1 2296 82 10 3 chr5 4178777 4179083 -198906449 + AluSx SINE Alu 1 308 -4 780 217 12 6 chr5 4179328 4179489 -198906043 - MER58A DNA MER1_type -32 192 31 2026 121 27 0 chr5 4180483 4180780 -198904752 + AluSx SINE Alu 1 305 -7 1412 155 64 4 chr5 4180783 4181047 -198904485 - L1MB7 LINE L1 -22 6162 5883 1388 221 105 41 chr5 4181056 4181323 -198904209 - MSTD LTR MaLR -11 385 88 1448 123 0 120 chr5 4181323 4181664 -198903868 - AluSg SINE Alu 0 300 1 1388 221 105 41 chr5 4181664 4181758 -198903774 - MSTD LTR MaLR -308 88 1 1863 168 10 54 chr5 4181758 4181977 -198903555 - L1MB7 LINE L1 -291 5893 5697 1845 161 3 0 chr5 4181977 4182288 -198903244 - AluJo SINE Alu 0 312 1 1863 168 10 54 chr5 4182288 4182456 -198903076 - L1MB7 LINE L1 -487 5697 5523 284 0 28 0 chr5 4182557 4182593 -198902939 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 258 312 74 40 chr5 4182835 4183037 -198902495 - MIR SINE MIR -7 255 47 30 45 0 0 chr5 4184075 4184119 -198901413 + AT_rich Low_complexity Low_complexity 1 44 0 3530 192 41 15 chr5 4184185 4184936 -198900596 - L1MA9 LINE L1 -38 6274 5504 266 225 14 14 chr5 4185444 4185515 -198900017 + MER103 DNA DNA 16 86 -80 522 280 108 20 chr5 4186142 4186392 -198899140 - L2 LINE L2 0 3313 3042 1586 266 132 48 chr5 4186524 4187018 -198898514 + MER69B DNA AcHobo 173 624 -1902 2138 69 49 0 chr5 4187018 4187306 -198898226 - AluY SINE Alu -9 302 1 1586 266 132 48 chr5 4187306 4187741 -198897791 + MER69B DNA AcHobo 624 1180 -46 2069 137 39 28 chr5 4187944 4188381 -198897151 + L1PA16 LINE L1 5725 6166 0 2084 139 0 0 chr5 4188487 4188797 -198896735 - AluSg SINE Alu 0 310 1 217 380 10 0 chr5 4190550 4190650 -198894882 + MIR SINE MIR 156 256 -6 2131 125 24 40 chr5 4191167 4191544 -198893988 + THE1C LTR MaLR 3 373 -2 1308 223 3 25 chr5 4194227 4194596 -198890936 + AluJb SINE Alu 1 362 0 1321 139 9 5 chr5 4194713 4194929 -198890603 + AluSq SINE Alu 97 313 0 2495 159 10 18 chr5 4194930 4195421 -198890111 + L1PA11 LINE L1 4416 4902 -1244 1852 130 3 0 chr5 4195421 4195706 -198889826 - AluSx SINE Alu 0 312 27 6162 109 3 14 chr5 4195752 4197027 -198888505 + L1PA11 LINE L1 4894 6161 -13 2148 274 85 15 chr5 4197074 4198243 -198887289 + L1MC1 LINE L1 2207 3456 -2690 341 280 21 0 chr5 4198253 4198346 -198887186 + MER2 DNA MER2_type 1 95 -250 224 185 31 0 chr5 4198350 4198415 -198887117 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 186 0 0 chr5 4198505 4198564 -198886968 - MER2 DNA MER2_type -286 59 1 * 448 241 154 23 chr5 4198564 4198783 -198886749 + MER2 DNA MER2_type 97 344 -1 212 161 48 0 chr5 4199315 4199377 -198886155 + (TA)n Simple_repeat Simple_repeat 1 65 0 359 203 0 0 chr5 4199467 4199526 -198886006 - MER2 DNA MER2_type -286 59 1 * 420 241 176 23 chr5 4199526 4199741 -198885791 + MER2 DNA MER2_type 97 344 -1 4929 237 24 30 chr5 4199749 4201198 -198884334 + L1MC1 LINE L1 3480 4919 -1227 3833 190 44 17 chr5 4201204 4202161 -198883371 + L1MC1 LINE L1 5083 6063 -270 478 258 33 0 chr5 4202170 4202290 -198883242 - MER69 DNA AcHobo -1064 162 39 455 167 20 0 chr5 4206071 4206269 -198879263 - L1MA4A LINE L1 -4 6299 6037 2293 114 2 48 chr5 4206396 4206816 -198878716 - L1PA11 LINE L1 -54 6120 5720 * 3886 173 11 7 chr5 4206815 4206846 -198878686 - L1MA4A LINE L1 -265 6038 6009 1462 163 37 55 chr5 4206846 4207227 -198878305 + THE1C LTR MaLR 1 374 -1 3886 173 11 7 chr5 4207227 4208341 -198877191 - L1MA4A LINE L1 -294 6009 4885 2265 107 3 3 chr5 4212090 4212389 -198873143 + AluSq SINE Alu 1 299 -14 479 280 81 5 chr5 4212811 4212997 -198872535 + MER3 DNA MER1_type 6 205 -4 739 160 35 0 chr5 4213227 4213486 -198872046 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 336 323 134 8 chr5 4213487 4213859 -198871673 + L1ME4a LINE L1 5555 5973 -148 4214 180 42 37 chr5 4216161 4217540 -198867992 + L1MA7 LINE L1 4901 6290 -1 552 306 69 26 chr5 4217756 4218145 -198867387 - MLT1I LTR MaLR -3 406 1 574 284 101 45 chr5 4218173 4218528 -198867004 + MLT1L LTR MaLR 241 615 0 883 295 157 14 chr5 4220198 4220625 -198864907 + MLT1D LTR MaLR 1 488 -17 2574 153 0 16 chr5 4222206 4222637 -198862895 + MSTA LTR MaLR 1 424 -4 666 189 0 0 chr5 4222659 4222770 -198862762 + FLAM_C SINE Alu 5 115 -18 413 19 19 0 chr5 4222789 4222843 -198862689 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 279 0 0 0 chr5 4222842 4222873 -198862659 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 234 0 0 0 chr5 4222872 4222898 -198862634 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr5 4222897 4222924 -198862608 + (GA)n Simple_repeat Simple_repeat 2 28 0 340 347 34 29 chr5 4223607 4223846 -198861686 + L1MC4a LINE L1 5645 5884 -1924 373 303 23 8 chr5 4224381 4224513 -198861019 + MER94 DNA DNA 1 134 0 269 276 17 60 chr5 4224577 4224693 -198860839 + L2 LINE L2 3203 3313 0 280 344 104 6 chr5 4225025 4225188 -198860344 + MER5A DNA MER1_type 7 185 -4 1278 228 155 54 chr5 4225935 4226361 -198859171 + MLT2B1 LTR ERVL 2 470 -50 258 91 91 0 chr5 4226397 4226441 -198859091 + MLT2D LTR ERVL 367 414 0 305 254 155 21 chr5 4228403 4228480 -198857052 - LTR50 LTR ERVL -2 793 728 1884 211 30 30 chr5 4228480 4228944 -198856588 + MLT1C LTR MaLR 4 467 0 305 254 155 21 chr5 4228944 4229059 -198856473 - LTR50 LTR ERVL -67 728 575 516 294 21 6 chr5 4229791 4229971 -198855561 + MLT1B LTR MaLR 189 382 -8 21 57 0 0 chr5 4231757 4231792 -198853740 + AT_rich Low_complexity Low_complexity 1 35 0 194 0 39 0 chr5 4232142 4232168 -198853364 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 210 265 0 36 chr5 4234877 4234960 -198850572 + C-rich Low_complexity Low_complexity 4 83 0 183 176 29 15 chr5 4238394 4238462 -198847070 + G-rich Low_complexity Low_complexity 3 71 0 29 28 0 0 chr5 4238633 4238669 -198846863 + GC_rich Low_complexity Low_complexity 1 36 0 36 102 0 0 chr5 4238816 4238943 -198846589 + GC_rich Low_complexity Low_complexity 1 127 0 224 149 21 0 chr5 4241824 4241871 -198843661 + CT-rich Low_complexity Low_complexity 1 48 0 25 65 0 0 chr5 4242630 4242676 -198842856 + GC_rich Low_complexity Low_complexity 1 46 0 291 113 0 0 chr5 4244115 4244168 -198841364 + (TG)n Simple_repeat Simple_repeat 1 53 0 235 291 0 29 chr5 4245614 4245717 -198839815 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 692 244 122 13 chr5 4248658 4248888 -198836644 - ORSL DNA AcHobo -17 258 4 311 0 26 0 chr5 4249740 4249779 -198835753 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 4250279 4250300 -198835232 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 4252979 4253011 -198832521 + (TG)n Simple_repeat Simple_repeat 1 33 0 371 254 59 25 chr5 4253144 4253262 -198832270 - MER5A DNA MER1_type -35 154 33 22 35 0 0 chr5 4253975 4254004 -198831528 + AT_rich Low_complexity Low_complexity 1 29 0 2158 127 0 19 chr5 4254324 4254639 -198830893 + AluSx SINE Alu 1 309 -3 479 94 0 0 chr5 4254697 4254761 -198830771 - AluSq/x SINE Alu -184 129 66 542 151 0 0 chr5 4254862 4254948 -198830584 + AluSg/x SINE Alu 213 298 -12 1496 174 89 11 chr5 4257199 4257480 -198828052 - AluJo SINE Alu -3 309 7 416 291 135 38 chr5 4257808 4258148 -198827384 + L3 LINE CR1 1204 1576 -1 540 258 56 50 chr5 4263719 4263917 -198821615 + MER20 DNA MER1_type 17 215 -4 277 176 69 98 chr5 4264462 4264564 -198820968 + MIR SINE MIR 38 136 -72 198 103 0 0 chr5 4266739 4266768 -198818764 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 326 40 0 chr5 4266881 4267105 -198818427 + L1ME4a LINE L1 5710 5942 -179 2297 125 8 40 chr5 4267929 4268305 -198817227 - THE1B LTR MaLR 0 364 1 1998 157 3 6 chr5 4268986 4269299 -198816233 - AluJb SINE Alu 0 312 1 775 311 136 44 chr5 4270315 4271374 -198814158 + L2 LINE L2 1478 2633 -681 189 0 0 0 chr5 4271477 4271498 -198814034 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 541 187 60 26 chr5 4271636 4271905 -198813627 + MLT1A1 LTR MaLR 12 353 -12 228 310 60 69 chr5 4272134 4272250 -198813282 - MIR SINE MIR -88 174 60 336 270 173 9 chr5 4272259 4272577 -198812955 - LTR16A LTR ERVL -15 435 66 288 0 0 0 chr5 4274123 4274155 -198811377 + (GA)n Simple_repeat Simple_repeat 1 32 0 204 129 81 16 chr5 4274483 4274545 -198810987 + CT-rich Low_complexity Low_complexity 2 67 0 403 209 18 0 chr5 4274659 4274769 -198810763 + CT-rich Low_complexity Low_complexity 4 115 0 304 264 19 38 chr5 4274782 4274888 -198810644 - L1M4 LINE L1 -2962 3184 3081 234 0 0 0 chr5 4274889 4274915 -198810617 + (TC)n Simple_repeat Simple_repeat 1 26 0 1487 194 33 33 chr5 4274917 4275216 -198810316 - AluJb SINE Alu -12 300 2 194 318 15 15 chr5 4275848 4275914 -198809618 - L2 LINE L2 -3 3269 3204 198 305 19 110 chr5 4275943 4276016 -198809516 + L2 LINE L2 2453 2507 -807 1977 113 0 39 chr5 4276016 4276322 -198809210 - AluSc SINE Alu 0 303 9 198 305 19 110 chr5 4276322 4276401 -198809131 + L2 LINE L2 2507 2592 -722 1711 158 15 75 chr5 4277273 4277457 -198808075 + MLT1B LTR MaLR 1 148 -242 2298 88 0 14 chr5 4277457 4277754 -198807778 + AluY SINE Alu 1 293 -18 1711 158 15 75 chr5 4277754 4277980 -198807552 + MLT1B LTR MaLR 148 386 -4 1402 211 62 9 chr5 4278407 4278743 -198806789 + MLT1A1 LTR MaLR 12 365 0 734 222 48 0 chr5 4278793 4278982 -198806550 + L1MC1 LINE L1 6129 6326 -7 576 289 10 102 chr5 4280038 4280936 -198804596 + TAR1 Satellite telomeric 1 816 -777 442 263 70 36 chr5 4281241 4281469 -198804063 - MLT1D LTR MaLR 0 467 261 1852 204 13 35 chr5 4281519 4281970 -198803562 - L1MB1 LINE L1 -39 6129 5689 433 244 19 39 chr5 4281966 4282167 -198803365 + L1M4c LINE L1 2163 2365 -3781 * 344 167 0 0 chr5 4282150 4282216 -198803316 + L1M2 LINE L1 5590 5655 -636 * 2048 152 0 10 chr5 4282246 4282548 -198802984 - AluSx SINE Alu -13 299 1 525 222 58 58 chr5 4282553 4282742 -198802790 - MLT1D LTR MaLR -313 192 4 2211 100 14 0 chr5 4283129 4283420 -198802112 - AluSc SINE Alu -14 295 1 326 262 6 139 chr5 4283718 4283890 -198801642 - MER5A DNA MER1_type -2 187 39 1822 189 23 30 chr5 4341087 4341695 -198743837 + L1MA8 LINE L1 4306 4990 -1156 1776 103 0 8 chr5 4341696 4341938 -198743594 + AluSc SINE Alu 1 240 -69 2182 108 0 3 chr5 4342105 4342411 -198743121 - AluSx SINE Alu -7 305 1 765 179 14 0 chr5 4342648 4342788 -198742744 + L1ME2 LINE L1 6014 6155 -9 378 277 25 25 chr5 4342787 4342989 -198742543 + L1M4c LINE L1 2838 3039 -3107 * 1296 175 0 87 chr5 4343977 4344311 -198741221 + L1MA8 LINE L1 5560 5866 -296 389 218 120 8 chr5 4344306 4344677 -198740855 + L1ME1 LINE L1 5732 6154 -12 * 243 103 0 0 chr5 4344694 4344733 -198740799 + (A)n Simple_repeat Simple_repeat 1 39 0 550 286 52 31 chr5 4344777 4344969 -198740563 + MIR SINE MIR 67 262 0 587 294 102 55 chr5 4344992 4345336 -198740196 + L1M4 LINE L1 2376 2735 -3411 201 240 93 27 chr5 4346778 4346853 -198738679 + L2 LINE L2 3192 3271 -42 1795 168 3 3 chr5 4346988 4347292 -198738240 + AluJb SINE Alu 1 304 -8 303 280 0 0 chr5 4348267 4348410 -198737122 + (CA)n Simple_repeat Simple_repeat 2 144 0 213 39 0 0 chr5 4348485 4348511 -198737021 + (CA)n Simple_repeat Simple_repeat 1 26 0 1149 177 111 46 chr5 4348612 4348963 -198736569 - MLT1C LTR MaLR -93 374 1 1648 174 3 13 chr5 4349161 4349460 -198736072 - AluJo SINE Alu -16 296 1 1803 154 59 131 chr5 4349777 4350219 -198735313 + MLT1C-int LTR MaLR 962 1371 0 1398 206 88 28 chr5 4350219 4350607 -198734925 + MLT1C LTR MaLR 1 411 -56 2096 128 0 10 chr5 4350619 4350917 -198734615 + AluSx SINE Alu 1 295 -17 242 303 160 17 chr5 4351309 4351428 -198734104 + L2 LINE L2 3137 3272 0 1571 125 79 0 chr5 4351488 4351728 -198733804 - AluJo SINE Alu -23 289 31 1224 171 18 0 chr5 4351764 4351981 -198733551 + MER68 LTR ERV1 1 221 -341 1629 182 90 18 chr5 4351981 4352149 -198733383 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 4352149 4352172 -198733360 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1629 182 90 18 chr5 4352172 4352338 -198733194 + MSTB1 LTR MaLR 170 373 -59 2318 126 0 3 chr5 4352339 4352649 -198732883 - AluSx SINE Alu -2 310 2 570 203 73 0 chr5 4352652 4352775 -198732757 + MER68 LTR ERV1 431 562 0 212 377 50 23 chr5 4352819 4353161 -198732371 + L2 LINE L2 2625 2975 -339 270 30 0 0 chr5 4353229 4353262 -198732270 + MER20 DNA MER1_type 25 57 -162 1200 236 76 22 chr5 4353274 4353630 -198731902 - MLT1B LTR MaLR -15 375 1 2074 160 10 38 chr5 4353672 4353846 -198731686 + MLT1B LTR MaLR 1 178 -212 2347 102 123 5 chr5 4353846 4354228 -198731304 - MSTA LTR MaLR -1 427 1 2074 160 10 38 chr5 4354228 4354452 -198731080 + MLT1B LTR MaLR 178 388 -2 491 244 42 0 chr5 4354452 4354571 -198730961 + MER20 DNA MER1_type 84 207 -12 2465 97 0 0 chr5 4354838 4355147 -198730385 + AluSx SINE Alu 1 309 -3 2715 45 0 0 chr5 4355295 4355604 -198729928 + AluY SINE Alu 1 309 -2 1568 167 24 37 chr5 4355729 4356023 -198729509 - AluJo SINE Alu -22 290 1 390 325 131 0 chr5 4356912 4357118 -198728414 - L2 LINE L2 -595 2719 2487 1726 142 97 13 chr5 4357215 4357526 -198728006 - MER1B DNA MER1_type 0 337 1 1815 175 3 20 chr5 4358207 4358315 -198727217 + AluSx SINE Alu 5 113 -199 2108 107 51 25 chr5 4358315 4358670 -198726862 + THE1B LTR MaLR 1 364 0 1815 175 3 20 chr5 4358670 4358853 -198726679 + AluSx SINE Alu 113 291 -21 925 166 0 0 chr5 4359036 4359193 -198726339 + MLT1B LTR MaLR 192 348 -42 1064 223 195 11 chr5 4359297 4359661 -198725871 + MER74B LTR ERVL 192 622 0 2467 83 13 44 chr5 4359757 4359924 -198725608 + THE1C LTR MaLR 1 172 -203 2700 27 7 3 chr5 4359924 4360224 -198725308 - AluY SINE Alu -10 301 1 2467 83 13 44 chr5 4360224 4360443 -198725089 + THE1C LTR MaLR 172 375 0 1691 180 7 26 chr5 4360607 4360913 -198724619 - AluJo SINE Alu -12 300 1 1127 177 4 44 chr5 4361692 4361918 -198723614 + AluJo SINE Alu 87 303 -9 509 186 88 0 chr5 4361988 4362101 -198723431 + HAL1 LINE L1 1631 1753 -754 1759 156 0 51 chr5 4362825 4363139 -198722393 + AluJo SINE Alu 1 298 -14 1824 125 0 4 chr5 4363432 4363680 -198721852 + AluSx SINE Alu 49 295 -17 212 220 0 20 chr5 4364008 4364058 -198721474 + (TA)n Simple_repeat Simple_repeat 1 49 0 192 125 0 0 chr5 4364196 4364228 -198721304 + (TA)n Simple_repeat Simple_repeat 2 33 0 2371 90 0 10 chr5 4364253 4364553 -198720979 - AluSg1 SINE Alu -1 308 12 1276 129 0 0 chr5 4364556 4364726 -198720806 - AluSg/x SINE Alu -9 301 132 2263 92 45 3 chr5 4364726 4365018 -198720514 - AluSx SINE Alu -8 304 1 1955 186 12 49 chr5 4365180 4365461 -198720071 + L1MB7 LINE L1 5402 5667 -517 2007 161 3 0 chr5 4365461 4365772 -198719760 + AluJo SINE Alu 1 312 0 1955 186 12 49 chr5 4365772 4365991 -198719541 + L1MB7 LINE L1 5667 5893 -291 1346 227 106 28 chr5 4365991 4366085 -198719447 + MSTD LTR MaLR 1 86 -310 2359 112 0 0 chr5 4366085 4366390 -198719142 + AluSg SINE Alu 1 305 -5 1346 227 106 28 chr5 4366390 4366652 -198718880 + MSTD LTR MaLR 86 385 -11 1356 159 64 4 chr5 4366661 4366925 -198718607 + L1MB7 LINE L1 5883 6162 -22 2186 121 27 0 chr5 4366928 4367225 -198718307 - AluSx SINE Alu -7 305 1 749 217 12 6 chr5 4368219 4368380 -198717152 + MER58A DNA MER1_type 31 192 -32 2457 82 10 3 chr5 4368625 4368931 -198716601 - AluSx SINE Alu -4 308 1 593 177 41 48 chr5 4368969 4369116 -198716416 + MER3 DNA MER1_type 1 146 -63 1119 166 0 0 chr5 4369116 4369291 -198716241 - FRAM SINE Alu -4 172 1 1862 131 0 15 chr5 4370036 4370303 -198715229 + AluSx SINE Alu 42 304 -8 2251 124 3 0 chr5 4370309 4370615 -198714917 + AluSx SINE Alu 1 307 -5 196 369 63 9 chr5 4370957 4371068 -198714464 + L2 LINE L2 3191 3307 -6 2400 105 0 0 chr5 4371145 4371450 -198714082 + AluSx SINE Alu 1 305 -7 2473 89 0 0 chr5 4372008 4372312 -198713220 - AluSx SINE Alu -8 304 1 216 97 0 0 chr5 4372998 4373029 -198712503 + (CCGCG)n Simple_repeat Simple_repeat 1 31 0 2023 155 57 26 chr5 4373723 4374143 -198711389 - Tigger2a DNA MER2_type 0 434 2 819 208 0 7 chr5 4374394 4374543 -198710989 + Tigger3(Golem) DNA MER2_type 1 148 -2881 510 148 26 17 chr5 4374545 4374569 -198710963 + Tigger3(Golem) DNA MER2_type 2370 2392 -637 2244 106 3 7 chr5 4374569 4374871 -198710661 + AluSq SINE Alu 1 301 -12 510 148 26 17 chr5 4374871 4374961 -198710571 + Tigger3(Golem) DNA MER2_type 2392 2485 -544 822 94 0 36 chr5 4374963 4375101 -198710431 + FLAM_C SINE Alu 1 133 0 1432 139 51 0 chr5 4375121 4375394 -198710138 + L1MA9 LINE L1 6018 6304 -8 2358 99 0 0 chr5 4375416 4375710 -198709822 + AluSx SINE Alu 1 294 -18 2173 141 11 0 chr5 4375710 4376058 -198709474 - L1PA12 LINE L1 -248 5920 5569 768 146 0 31 chr5 4376512 4376642 -198708890 + FLAM_C SINE Alu 2 127 -6 183 80 0 0 chr5 4376666 4376691 -198708841 + (CAT)n Simple_repeat Simple_repeat 2 26 0 1072 216 69 69 chr5 4376886 4377182 -198708350 - LTR16A1 LTR ERVL -55 402 104 2987 174 37 29 chr5 4377182 4377213 -198708319 + LTR24C LTR ERV1 5 34 -601 1602 192 7 23 chr5 4377213 4377515 -198708017 + AluJo SINE Alu 1 297 -15 2987 174 37 29 chr5 4377515 4378109 -198707423 + LTR24C LTR ERV1 34 635 0 1072 216 69 69 chr5 4378109 4378159 -198707373 - LTR16A1 LTR ERVL -352 105 56 2285 104 0 3 chr5 4378394 4378693 -198706839 + AluSx SINE Alu 2 299 -13 271 204 0 0 chr5 4378710 4378759 -198706773 + L1MA7 LINE L1 6018 6066 -225 2254 110 3 0 chr5 4479012 4479320 -198606212 + AluSc SINE Alu 1 309 0 25 0 0 0 chr5 4479494 4479519 -198606013 + AT_rich Low_complexity Low_complexity 1 25 0 946 53 26 7 chr5 4479603 4479754 -198605778 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 232 323 23 0 chr5 4479875 4480005 -198605527 - L2 LINE L2 -1635 1679 1547 208 143 0 0 chr5 4480282 4480317 -198605215 + (TTA)n Simple_repeat Simple_repeat 3 37 0 1079 258 31 17 chr5 4480655 4480942 -198604590 - L1MD1 LINE L1 -168 6074 5784 2128 243 92 66 chr5 4481643 4482714 -198602818 + L1ME2 LINE L1 5045 6156 -8 25 31 0 0 chr5 4482800 4482832 -198602700 + AT_rich Low_complexity Low_complexity 1 32 0 320 278 108 33 chr5 4482963 4483323 -198602209 + L1ME4a LINE L1 2200 2586 -3560 284 173 123 48 chr5 4483437 4483635 -198601897 + MER5C DNA MER1_type 47 323 -1 254 282 41 46 chr5 4483636 4483831 -198601701 + L1ME4a LINE L1 2689 2882 -3264 670 271 74 17 chr5 4484063 4484444 -198601088 + L1ME4a LINE L1 5209 5607 -555 6951 67 26 1 chr5 4484561 4486226 -198599306 + L1PA7 LINE L1 4455 6154 0 2025 127 0 7 chr5 4486399 4486691 -198598841 + AluSx SINE Alu 1 290 -22 996 121 0 73 chr5 4488915 4489080 -198596452 + Charlie3 DNA MER1_type 2550 2702 -8 302 279 16 16 chr5 4489107 4489229 -198596303 + L1ME4a LINE L1 5762 5883 -238 441 309 90 18 chr5 4490641 4490864 -198594668 - MLT1J2 LTR MaLR -158 292 54 250 235 74 25 chr5 4491105 4491186 -198594346 - Charlie7 DNA MER1_type -1 2611 2527 1335 224 86 45 chr5 4491382 4491542 -198593990 + L1MC1 LINE L1 4341 4493 -1653 2045 93 0 0 chr5 4491542 4491830 -198593702 + AluSq SINE Alu 35 322 0 1335 224 86 45 chr5 4491830 4492133 -198593399 + L1MC1 LINE L1 4493 4824 -1322 5061 150 32 8 chr5 4492161 4493029 -198592503 + L1MC1 LINE L1 5356 6244 -89 419 132 0 85 chr5 4493142 4493248 -198592284 + L1MA7 LINE L1 6194 6290 -1 896 140 11 11 chr5 4493536 4493715 -198591817 + GA-rich Low_complexity Low_complexity 2 180 0 749 165 24 10 chr5 4493743 4494011 -198591521 + GA-rich Low_complexity Low_complexity 1 271 0 255 195 0 0 chr5 4494011 4494052 -198591480 + polypurine Low_complexity Low_complexity 1 41 0 681 171 28 6 chr5 4494052 4494228 -198591304 + GA-rich Low_complexity Low_complexity 1 180 0 203 146 24 0 chr5 4494256 4494297 -198591235 + GA-rich Low_complexity Low_complexity 1 42 0 2319 225 49 24 chr5 4494338 4494952 -198590580 - L1MB3 LINE L1 -16 6167 5539 2292 128 0 0 chr5 4497710 4498022 -198587510 - AluSx SINE Alu 0 312 1 337 318 40 10 chr5 4498158 4498359 -198587173 + LTR16A LTR ERVL 203 409 -41 2366 60 0 3 chr5 4498458 4498779 -198586753 - AluY SINE Alu 0 320 1 346 240 40 40 chr5 4498970 4499120 -198586412 - L1MCc LINE L1 -6250 173 24 235 171 24 0 chr5 4500390 4500431 -198585101 + L1ME LINE L1 5560 5601 -561 1270 132 0 0 chr5 4500539 4500724 -198584808 + AluSg/x SINE Alu 131 312 0 21 0 0 0 chr5 4501236 4501257 -198584275 + AT_rich Low_complexity Low_complexity 1 21 0 818 211 17 29 chr5 4501489 4501682 -198583850 + MLT1A2 LTR MaLR 1 174 -200 208 220 0 0 chr5 4501682 4501732 -198583800 + CT-rich Low_complexity Low_complexity 1 50 0 2021 234 42 22 chr5 4501858 4502310 -198583222 + MLT1A2-int LTR MaLR 1271 1731 -4 1297 243 38 30 chr5 4502314 4502685 -198582847 + MLT1A2 LTR MaLR 1 374 0 273 264 28 47 chr5 4504331 4504437 -198581095 - MIR SINE MIR -1 261 158 365 179 64 0 chr5 4504782 4504860 -198580672 - L1MC1 LINE L1 -8 6325 6243 1504 115 42 0 chr5 4504862 4505079 -198580453 + THE1B LTR MaLR 1 226 -138 24491 128 16 77 chr5 4506041 4509085 -198576447 + L1P LINE L1 12 2676 -3470 2276 113 0 0 chr5 4509085 4509386 -198576146 + AluY SINE Alu 1 301 -10 24491 128 16 77 chr5 4509386 4511007 -198574525 + L1P LINE L1 2676 4394 -1752 206 45 15 159 chr5 4511176 4511377 -198574155 + (CACAT)n Simple_repeat Simple_repeat 5 176 0 270 29 0 162 chr5 4511395 4511599 -198573933 + (CACAT)n Simple_repeat Simple_repeat 1 171 0 * 376 364 0 0 chr5 4511465 4511763 -198573769 + C-rich Low_complexity Low_complexity 1 298 0 3708 47 0 4 chr5 4513625 4514075 -198571457 - LTR7 LTR ERV1 -2 448 1 1634 171 25 0 chr5 4514404 4514685 -198570847 + AluJb SINE Alu 1 288 -24 269 176 29 0 chr5 4514685 4514753 -198570779 + (TA)n Simple_repeat Simple_repeat 1 70 0 430 92 72 20 chr5 4514755 4514907 -198570625 + (TTATA)n Simple_repeat Simple_repeat 1 160 0 323 162 27 0 chr5 4514910 4514984 -198570548 + (TA)n Simple_repeat Simple_repeat 2 77 0 557 268 60 0 chr5 4517016 4517199 -198568333 + MIR SINE MIR 61 254 -8 1581 82 5 0 chr5 4517780 4517986 -198567546 - AluY SINE Alu -94 217 11 22 56 0 0 chr5 4518120 4518156 -198567376 + AT_rich Low_complexity Low_complexity 1 36 0 2322 89 3 0 chr5 4518622 4518913 -198566619 + AluSp SINE Alu 1 292 -21 23 0 0 0 chr5 4518929 4518952 -198566580 + AT_rich Low_complexity Low_complexity 1 23 0 200 368 46 0 chr5 4519358 4519513 -198566019 + MIR SINE MIR 18 183 -58 28 0 0 0 chr5 4521032 4521060 -198564472 + AT_rich Low_complexity Low_complexity 1 28 0 225 304 35 3 chr5 4521803 4521905 -198563627 + MIR SINE MIR 31 134 -74 2117 120 6 28 chr5 4522178 4522495 -198563037 + AluSx SINE Alu 1 310 -2 199 276 138 43 chr5 4527368 4527484 -198558048 + L2 LINE L2 3010 3136 -177 2393 118 28 3 chr5 4527524 4527879 -198557653 - THE1B LTR MaLR 0 364 1 354 234 0 0 chr5 4528194 4528301 -198557231 + (TGGG)n Simple_repeat Simple_repeat 3 109 0 601 203 9 6 chr5 4529926 4530273 -198555259 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 222 205 0 0 chr5 4530406 4530445 -198555087 + T-rich Low_complexity Low_complexity 5 43 0 379 281 158 32 chr5 4531701 4532107 -198553425 - L1ME4a LINE L1 -239 5882 5426 314 280 15 63 chr5 4533211 4533265 -198552267 + L1MDb LINE L1 1147 1202 -5207 1355 218 92 12 chr5 4533265 4533600 -198551932 - MLT1A1 LTR MaLR 0 365 4 314 280 15 63 chr5 4533600 4533813 -198551719 + L1MDb LINE L1 1202 1401 -5008 514 339 47 4 chr5 4533861 4534097 -198551435 + L1M4 LINE L1 4628 4873 -1273 234 91 0 0 chr5 4534238 4534271 -198551261 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 245 182 121 30 chr5 4535110 4535176 -198550356 + MLT1K LTR MaLR 192 263 -325 236 305 53 11 chr5 4535134 4535229 -198550303 + LTR67 LTR ERVL 146 244 -313 * 2018 136 0 0 chr5 4535340 4535613 -198549919 - AluSg SINE Alu -37 273 1 21 57 0 0 chr5 4537347 4537382 -198548150 + AT_rich Low_complexity Low_complexity 1 35 0 2250 66 0 0 chr5 4537504 4537776 -198547756 + AluY SINE Alu 34 305 -6 2199 108 0 10 chr5 4538890 4539186 -198546346 + AluSc SINE Alu 1 293 -16 3730 233 19 42 chr5 4539736 4541264 -198544268 - L1P3 LINE L1 -4735 1140 4 1690 188 14 0 chr5 4541309 4541597 -198543935 - AluSx SINE Alu -17 295 4 192 77 0 0 chr5 4543608 4543634 -198541898 + (CA)n Simple_repeat Simple_repeat 2 27 0 516 221 0 0 chr5 4543645 4543994 -198541538 + (CA)n Simple_repeat Simple_repeat 1 349 0 462 243 0 0 chr5 4544005 4544182 -198541350 + (CA)n Simple_repeat Simple_repeat 1 177 0 393 247 0 0 chr5 4544207 4544373 -198541159 + (CA)n Simple_repeat Simple_repeat 2 167 0 195 42 0 0 chr5 4545002 4545026 -198540506 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 31 0 0 0 chr5 4546937 4546968 -198538564 + AT_rich Low_complexity Low_complexity 1 31 0 196 339 46 15 chr5 4547735 4547865 -198537667 - L2 LINE L2 -15 3298 3165 553 233 72 22 chr5 4548029 4548209 -198537323 - L1MC4 LINE L1 -1053 6989 6801 2683 17 3 0 chr5 4549020 4549314 -198536218 + AluY SINE Alu 1 295 -16 236 337 0 33 chr5 4550702 4550794 -198534738 - L3 LINE CR1 -161 1416 1328 230 318 16 0 chr5 4550921 4550984 -198534548 + MIR SINE MIR 85 148 -114 195 171 0 43 chr5 4551621 4551691 -198533841 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 306 156 78 0 chr5 4551699 4551763 -198533769 - L1MCa LINE L1 -4362 2064 1996 1349 172 19 130 chr5 4551763 4552124 -198533408 - MER7A DNA MER2_type -16 330 12 1833 108 8 8 chr5 4552232 4552492 -198533040 + AluSg SINE Alu 32 291 -19 524 236 6 0 chr5 4554164 4554342 -198531190 + (CA)n Simple_repeat Simple_repeat 1 179 0 477 244 134 0 chr5 4554373 4554545 -198530987 - MLT2F LTR ERVL -8 655 461 451 272 111 14 chr5 4558089 4558306 -198527226 - L1ME4a LINE L1 -248 5873 5636 24 0 0 0 chr5 4558311 4558335 -198527197 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr5 4558400 4558434 -198527098 + AT_rich Low_complexity Low_complexity 1 34 0 227 262 0 0 chr5 4558438 4558499 -198527033 + LTR66 LTR ERVL 398 458 -152 368 339 23 0 chr5 4558783 4558913 -198526619 + L1MEd LINE L1 511 643 -5562 1677 266 26 6 chr5 4558924 4559390 -198526142 + L1MD3 LINE L1 7511 7985 -10 232 328 26 70 chr5 4559403 4559674 -198525858 + L1MEd LINE L1 646 904 -5301 440 287 52 55 chr5 4559775 4560137 -198525395 + L1MEd LINE L1 981 1341 -4864 297 274 57 56 chr5 4560212 4560621 -198524911 + L1MEd LINE L1 1501 1760 -920 522 287 94 40 chr5 4560924 4561460 -198524072 + L1MEd LINE L1 2153 2665 -3550 1086 159 0 37 chr5 4561795 4561984 -198523548 + L1PA16 LINE L1 5976 6157 -9 23 0 0 0 chr5 4561984 4562007 -198523525 + AT_rich Low_complexity Low_complexity 1 23 0 826 200 0 50 chr5 4562111 4562291 -198523241 + AluJb SINE Alu 136 306 -6 754 212 232 10 chr5 4562293 4562595 -198522937 - L1ME3 LINE L1 -14 6148 5780 920 194 53 119 chr5 4562611 4562931 -198522601 + MLT1A2 LTR MaLR 26 324 -50 523 342 126 23 chr5 4563242 4563284 -198522248 + L1ME3A LINE L1 5294 5330 -840 2688 96 36 14 chr5 4563284 4563640 -198521892 + THE1B LTR MaLR 1 364 0 523 342 126 23 chr5 4563640 4564083 -198521449 + L1ME3A LINE L1 5330 5829 -341 1739 152 28 14 chr5 4564104 4564387 -198521145 + AluJb SINE Alu 1 287 -25 312 91 0 0 chr5 4566628 4566672 -198518860 + (GA)n Simple_repeat Simple_repeat 1 44 0 327 338 46 27 chr5 4566716 4566935 -198518597 - MIR SINE MIR -11 251 29 252 306 28 0 chr5 4566964 4567036 -198518496 - MER2 DNA MER2_type 0 345 272 2062 87 4 0 chr5 4567041 4567306 -198518226 + L1PB1 LINE L1 5886 6151 0 1335 177 83 0 chr5 4567347 4567612 -198517920 - MER2 DNA MER2_type -58 287 1 374 282 63 14 chr5 4568508 4568650 -198516882 - MIR SINE MIR -21 241 93 2139 116 14 0 chr5 4569287 4569579 -198515953 - AluSx SINE Alu -16 296 1 258 32 0 0 chr5 4569984 4570015 -198515517 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 506 257 32 30 chr5 4570021 4570177 -198515355 + L1MA7 LINE L1 5972 6122 -169 2344 85 7 0 chr5 4570177 4570470 -198515062 + AluY SINE Alu 1 295 -16 506 257 32 30 chr5 4570470 4570483 -198515049 + L1MA7 LINE L1 6122 6133 -158 505 198 27 0 chr5 4570584 4570695 -198514837 + L1MA7 LINE L1 6176 6289 -2 183 184 0 0 chr5 4570743 4570781 -198514751 + GA-rich Low_complexity Low_complexity 1 38 0 225 143 0 0 chr5 4572563 4572598 -198512934 + MER63 DNA MER1_type 695 729 -107 270 324 46 46 chr5 4574001 4574174 -198511358 + MIR SINE MIR 48 220 -42 444 316 57 19 chr5 4574281 4574493 -198511039 + MIR SINE MIR 40 259 -3 396 263 153 58 chr5 4575689 4575836 -198509696 - L2 LINE L2 -50 3263 3131 374 68 0 17 chr5 4575836 4575895 -198509637 + (TA)n Simple_repeat Simple_repeat 2 59 0 396 263 153 58 chr5 4575895 4576158 -198509374 - L2 LINE L2 -182 3131 2814 1971 119 80 44 chr5 4576850 4577212 -198508320 - THE1C LTR MaLR 0 375 1 293 254 127 0 chr5 4578188 4578330 -198507202 + MLT1K LTR MaLR 363 522 -66 1217 273 52 11 chr5 4578774 4579236 -198506296 - L1M4 LINE L1 -1160 4986 4506 485 303 50 54 chr5 4579562 4579859 -198505673 - HAL1 LINE L1 -842 1665 1370 564 309 12 0 chr5 4580174 4580339 -198505193 + MIR SINE MIR 32 198 -64 237 118 0 0 chr5 4580848 4580882 -198504650 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 242 13 19 chr5 4580883 4581040 -198504492 + CT-rich Low_complexity Low_complexity 4 159 0 2043 129 3 0 chr5 4582332 4582627 -198502905 + AluSx SINE Alu 1 296 -16 319 132 55 0 chr5 4582653 4582744 -198502788 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 0 0 0 chr5 4582940 4582961 -198502571 + AT_rich Low_complexity Low_complexity 1 21 0 479 268 157 25 chr5 4585179 4585377 -198500155 + MIR SINE MIR 10 233 -29 1628 213 7 34 chr5 4585561 4586002 -198499530 + MLT2B3 LTR ERVL 5 481 -34 700 152 30 0 chr5 4586023 4586188 -198499344 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 681 184 11 17 chr5 4586211 4586390 -198499142 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 197 65 32 0 chr5 4586413 4586444 -198499088 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 583 196 13 0 chr5 4586463 4586616 -198498916 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 325 117 17 33 chr5 4586617 4586677 -198498855 + MLT2B3 LTR ERVL 462 554 0 207 69 0 0 chr5 4587197 4587226 -198498306 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 4587795 4587817 -198497715 + AT_rich Low_complexity Low_complexity 1 22 0 884 241 50 70 chr5 4588056 4588561 -198496971 + MER34 LTR ERV1 6 585 0 379 236 36 9 chr5 4589378 4589488 -198496044 + MARNA DNA Mariner 266 378 -208 2271 100 0 13 chr5 4590258 4590567 -198494965 - AluSx SINE Alu -7 305 1 622 197 61 14 chr5 4591735 4591882 -198493650 + MLT1B LTR MaLR 8 161 -229 2743 89 22 32 chr5 4591889 4592294 -198493238 - L1PA13 LINE L1 0 6163 5763 1137 194 0 0 chr5 4592294 4592516 -198493016 + L1P LINE L1 5174 5395 -751 895 204 33 50 chr5 4592516 4592756 -198492776 + MLT1B LTR MaLR 143 378 -12 9391 164 21 5 chr5 4592953 4592973 -198492559 - L1P LINE L1 -2743 3403 3385 7353 131 10 51 chr5 4592973 4593671 -198491861 - L1PA10 LINE L1 0 6168 5443 613 100 0 0 chr5 4593671 4593751 -198491781 - MADE1 DNA Mariner 0 80 1 7353 131 10 51 chr5 4593751 4595124 -198490408 - L1PA10 LINE L1 -725 5443 4154 9391 164 21 5 chr5 4595124 4596834 -198488698 - L1P LINE L1 -2761 3385 1645 2131 149 6 6 chr5 4596841 4597170 -198488362 - THE1B LTR MaLR 0 364 36 542 15 15 0 chr5 4599481 4599548 -198485984 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 852 153 0 22 chr5 4599549 4599732 -198485800 + CT-rich Low_complexity Low_complexity 1 179 0 2245 147 3 5 chr5 4605895 4606262 -198479270 - L1PB1 LINE L1 -3 6148 5783 378 231 0 0 chr5 4606262 4606353 -198479179 + (TG)n Simple_repeat Simple_repeat 1 91 0 1360 116 1 20 chr5 4606353 4606590 -198478942 - L1PB1 LINE L1 -359 5792 5569 613 265 0 0 chr5 4607084 4607235 -198478297 - L1MB7 LINE L1 -16 6168 6018 1657 185 0 3 chr5 4609725 4610023 -198475509 - AluJo SINE Alu -1 311 15 1848 138 10 3 chr5 4611136 4611440 -198474092 + AluSx SINE Alu 1 306 -6 268 306 70 70 chr5 4612412 4612611 -198472921 + MIR SINE MIR 13 211 -51 358 303 6 43 chr5 4613081 4613243 -198472289 + L1PA10 LINE L1 5858 6013 -155 * 1668 191 57 37 chr5 4613115 4613517 -198472015 + L1MA4A LINE L1 5888 6297 -6 297 312 6 6 chr5 4614126 4614296 -198471236 + (TA)n Simple_repeat Simple_repeat 2 171 0 267 341 16 0 chr5 4614422 4614548 -198470984 + C-rich Low_complexity Low_complexity 6 133 0 233 245 0 7 chr5 4614551 4614702 -198470830 + (CA)n Simple_repeat Simple_repeat 1 150 0 216 111 0 0 chr5 4614802 4614838 -198470694 + (CA)n Simple_repeat Simple_repeat 1 36 0 2135 118 0 0 chr5 4617507 4617813 -198467719 + AluSq SINE Alu 2 307 -6 1918 228 150 110 chr5 4620598 4621154 -198464378 - L1MC3 LINE L1 -9 7776 7244 265 245 39 59 chr5 4621154 4621256 -198464276 - MLT1F1 LTR MaLR -434 133 34 1918 228 150 110 chr5 4621256 4621650 -198463882 - L1MC3 LINE L1 -541 7244 6683 204 118 29 0 chr5 4622377 4622411 -198463121 + GA-rich Low_complexity Low_complexity 2 36 0 544 249 169 80 chr5 4622501 4622780 -198462752 + MLT1H1 LTR MaLR 14 267 -288 580 288 25 0 chr5 4622780 4622978 -198462554 + MER105 DNA DNA 2 204 0 544 249 169 80 chr5 4622978 4623184 -198462348 + MLT1H1 LTR MaLR 267 542 -13 322 265 41 0 chr5 4624297 4624395 -198461137 + MIR SINE MIR 151 252 -10 1715 173 52 30 chr5 4625186 4625551 -198459981 + THE1C LTR MaLR 1 373 -2 9491 141 16 35 chr5 4625555 4627164 -198458368 + THE1C-int LTR MaLR 3 1580 0 1492 170 38 98 chr5 4627164 4627563 -198457969 + THE1C LTR MaLR 1 375 0 493 255 59 20 chr5 4629397 4629550 -198455982 + MER70B LTR ERVL 1 159 -419 * 2116 245 21 4 chr5 4629549 4630019 -198455513 + MER70B LTR ERVL 90 567 -11 331 212 29 7 chr5 4630302 4630439 -198455093 + GA-rich Low_complexity Low_complexity 2 141 0 468 175 0 0 chr5 4630540 4630637 -198454895 + GA-rich Low_complexity Low_complexity 2 98 0 267 299 11 0 chr5 4631215 4631302 -198454230 + (CA)n Simple_repeat Simple_repeat 1 88 0 2468 36 7 10 chr5 4633913 4634215 -198451317 - AluY SINE Alu -10 301 1 1367 203 6 37 chr5 4634270 4634591 -198450941 - AluJb SINE Alu -1 311 1 2045 101 0 4 chr5 4634781 4635058 -198450474 - AluSq SINE Alu -27 286 11 1866 120 0 33 chr5 4635205 4635504 -198450028 - AluSx SINE Alu -23 289 1 26 0 0 0 chr5 4635768 4635794 -198449738 + AT_rich Low_complexity Low_complexity 1 26 0 1702 173 0 13 chr5 4636279 4636585 -198448947 + AluSx SINE Alu 1 302 -10 1643 110 0 62 chr5 4636894 4637167 -198448365 + AluSg SINE Alu 49 304 -6 345 310 192 15 chr5 4637374 4637645 -198447887 + L1M4 LINE L1 5074 5392 -754 1429 219 135 12 chr5 4688003 4688419 -198397113 - MLT1C LTR MaLR 0 467 1 345 300 95 21 chr5 4688528 4688718 -198396814 - MIR SINE MIR -36 226 23 1306 210 63 30 chr5 4689512 4689874 -198395658 - MLT1A2 LTR MaLR 0 374 1 258 294 88 0 chr5 4691627 4691729 -198393803 - MIR SINE MIR -62 146 36 226 143 0 0 chr5 4692124 4692166 -198393366 - L2 LINE L2 -1 3312 3271 343 202 0 0 chr5 4692434 4692505 -198393027 - MLT1D LTR MaLR -2 593 477 292 247 112 8 chr5 4692657 4692779 -198392753 - MLT1H LTR MaLR -376 173 82 255 326 54 0 chr5 4692839 4692931 -198392601 + L2 LINE L2 3214 3310 -3 25 51 0 0 chr5 4693769 4693808 -198391724 + AT_rich Low_complexity Low_complexity 1 39 0 1499 165 32 21 chr5 4693810 4694089 -198391443 - AluJb SINE Alu -30 282 1 2179 131 0 0 chr5 4694110 4694415 -198391117 - AluSx SINE Alu -7 305 1 1242 271 32 42 chr5 4694416 4694914 -198390618 - MLT1D LTR MaLR -12 493 1 680 226 43 43 chr5 4694968 4695176 -198390356 - MER3 DNA MER1_type -1 208 1 4169 164 18 78 chr5 4697101 4698060 -198387472 + L1MB3 LINE L1 5280 6180 -3 910 253 77 33 chr5 4699342 4699678 -198385854 - MER39 LTR ERV1 0 707 357 246 242 62 62 chr5 4699699 4699827 -198385705 - MER39 LTR ERV1 -574 133 6 4549 161 46 23 chr5 4701168 4702009 -198383523 + L1MC1 LINE L1 5450 6310 -23 2743 250 40 22 chr5 4702020 4702841 -198382691 + L1ME1 LINE L1 5325 6160 -6 728 197 8 0 chr5 4703143 4703275 -198382257 + FLAM_C SINE Alu 1 133 0 373 254 18 26 chr5 4705097 4705211 -198380321 - Charlie1b DNA MER1_type -323 200 88 1154 262 29 29 chr5 4706449 4706789 -198378743 - MLT1A1 LTR MaLR 0 365 26 1525 206 41 32 chr5 4707010 4707452 -198378080 + Charlie1b DNA MER1_type 74 519 -4 213 39 0 0 chr5 4707540 4707566 -198377966 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1335 173 82 12 chr5 4707575 4707830 -198377702 - AluJo SINE Alu -24 288 16 211 257 40 0 chr5 4707872 4707946 -198377586 + CT-rich Low_complexity Low_complexity 5 81 0 306 257 49 28 chr5 4708623 4708767 -198376765 + CT-rich Low_complexity Low_complexity 2 148 0 264 184 0 0 chr5 4708842 4708891 -198376641 - Charlie1 DNA MER1_type 0 2761 2713 2474 94 46 6 chr5 4710235 4710585 -198374947 + THE1B LTR MaLR 1 364 0 189 303 0 0 chr5 4711433 4711578 -198373954 + (TG)n Simple_repeat Simple_repeat 1 145 0 1972 189 21 0 chr5 4712813 4713195 -198372337 - MLT1B LTR MaLR 0 390 1 22 56 0 0 chr5 4715628 4715664 -198369868 + AT_rich Low_complexity Low_complexity 1 36 0 2422 53 0 3 chr5 4715711 4716061 -198369471 - AluY SINE Alu 0 349 1 1387 224 48 3 chr5 4718252 4718587 -198366945 + MER89 LTR ERV1 188 537 -22 182 380 43 0 chr5 4719230 4719322 -198366210 - L3 LINE CR1 -588 989 894 1505 232 30 14 chr5 4719900 4720267 -198365265 - MLT1A2 LTR MaLR 0 374 2 1792 35 4 18 chr5 4720471 4720698 -198364834 + L1PA4 LINE L1 5932 6155 0 1908 161 146 3 chr5 4721199 4721577 -198363955 + MSTB1 LTR MaLR 1 432 0 262 336 30 8 chr5 4722250 4722384 -198363148 + MIR SINE MIR 40 176 -86 1627 65 0 0 chr5 4723187 4723387 -198362145 - L1PA8 LINE L1 -6 6166 5967 423 243 0 10 chr5 4723980 4724083 -198361449 - FLAM_A SINE Alu -9 133 32 318 275 43 72 chr5 4724298 4724436 -198361096 - MLT1H LTR MaLR -207 342 209 22 35 0 0 chr5 4724787 4724816 -198360716 + AT_rich Low_complexity Low_complexity 1 29 0 2315 247 51 33 chr5 4724951 4725644 -198359888 + L1MCa LINE L1 37 716 -5848 342 0 0 0 chr5 4725644 4725682 -198359850 + (CA)n Simple_repeat Simple_repeat 2 39 0 2315 247 51 33 chr5 4725682 4726208 -198359324 + L1MCa LINE L1 716 1991 -4573 2220 200 22 16 chr5 4726231 4726720 -198358812 + L1MC3 LINE L1 7293 7784 -1 12879 28 1 0 chr5 4727825 4729342 -198356190 - L1P LINE L1 -1702 4444 2926 1323 0 0 0 chr5 4729343 4729487 -198356045 + L1PA2 LINE L1 6009 6152 -3 922 202 33 29 chr5 4730352 4730668 -198354864 - MSTD LTR MaLR 0 396 4 745 281 86 69 chr5 4731713 4732571 -198352961 - L1MEd LINE L1 -4871 1248 427 372 291 50 50 chr5 4735900 4736120 -198349412 - MIR SINE MIR -30 232 13 1204 179 25 122 chr5 4738262 4738615 -198346917 - MLT1A1 LTR MaLR -46 319 1 2494 31 7 0 chr5 4738872 4739166 -198346366 + L1PA4 LINE L1 5860 6155 0 1375 236 120 23 chr5 4739557 4739956 -198345576 + MER31B LTR ERV1 1 438 -28 306 115 0 0 chr5 4740515 4740567 -198344965 + (CA)n Simple_repeat Simple_repeat 1 52 0 462 110 82 0 chr5 4741061 4741134 -198344398 - MADE1 DNA Mariner -1 79 1 302 306 20 0 chr5 4741510 4741608 -198343924 - MER5A DNA MER1_type -80 109 10 972 217 53 35 chr5 4741625 4741943 -198343589 - MER33 DNA MER1_type 0 324 1 325 378 67 11 chr5 4741945 4742212 -198343320 - L3 LINE CR1 -46 1531 1250 305 342 69 32 chr5 4742506 4742902 -198342630 - L3 LINE CR1 -745 832 363 406 260 16 16 chr5 4743433 4743556 -198341976 - L2 LINE L2 -4 3309 3187 22 0 0 0 chr5 4744507 4744529 -198341003 + AT_rich Low_complexity Low_complexity 1 22 0 318 106 0 0 chr5 4745062 4745109 -198340423 + (TG)n Simple_repeat Simple_repeat 1 47 0 225 211 0 0 chr5 4745121 4745173 -198340359 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 237 167 0 0 chr5 4745416 4745470 -198340062 + GA-rich Low_complexity Low_complexity 2 55 0 180 0 0 0 chr5 4747025 4747045 -198338487 + (A)n Simple_repeat Simple_repeat 1 20 0 7201 161 74 5 chr5 4747445 4749913 -198335619 + L1MA3 LINE L1 3657 6305 0 863 203 7 7 chr5 4753675 4753828 -198331704 - AluJb SINE Alu -23 289 137 1789 182 116 6 chr5 4754814 4755177 -198330355 + MER57A LTR ERV1 1 403 0 6029 111 44 0 chr5 4756201 4757189 -198328343 - L1PA13 LINE L1 -2 6161 5168 8252 214 67 29 chr5 4762701 4763675 -198321857 - L1MC1 LINE L1 -6 6607 5671 1494 116 5 14 chr5 4763675 4763891 -198321641 - AluSq SINE Alu -6 307 94 8252 214 67 29 chr5 4763891 4769228 -198316304 - L1MC1 LINE L1 -942 5671 23 2220 113 0 7 chr5 4769243 4769543 -198315989 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 4769553 4769577 -198315955 + AT_rich Low_complexity Low_complexity 1 24 0 298 196 22 0 chr5 4769624 4769716 -198315816 + (TA)n Simple_repeat Simple_repeat 2 95 0 186 143 0 0 chr5 4769870 4769905 -198315627 + (TC)n Simple_repeat Simple_repeat 1 35 0 459 0 0 0 chr5 4769905 4769956 -198315576 + (TG)n Simple_repeat Simple_repeat 2 52 0 1681 189 85 33 chr5 4769956 4770480 -198315052 - MLT2A2 LTR ERVL -5 549 2 339 25 0 0 chr5 4770481 4770521 -198315011 + (TG)n Simple_repeat Simple_repeat 2 41 0 191 408 14 7 chr5 4770640 4770787 -198314745 + MIR3 SINE MIR 20 167 -41 2248 110 0 10 chr5 4771177 4771486 -198314046 + AluSx SINE Alu 1 306 -6 22 0 0 0 chr5 4771607 4771629 -198313903 + AT_rich Low_complexity Low_complexity 1 22 0 534 296 87 27 chr5 4771812 4772146 -198313386 - MLT1H LTR MaLR -195 354 1 189 0 0 0 chr5 4772448 4772469 -198313063 + (A)n Simple_repeat Simple_repeat 1 21 0 1897 135 7 0 chr5 4772520 4772801 -198312731 - AluSx SINE Alu -7 305 23 2335 97 0 0 chr5 4773304 4773602 -198311930 + AluSp SINE Alu 4 301 -12 360 0 0 0 chr5 4773602 4773642 -198311890 + (TG)n Simple_repeat Simple_repeat 2 41 0 318 190 20 30 chr5 4774585 4774685 -198310847 + A-rich Low_complexity Low_complexity 6 104 0 269 82 20 0 chr5 4775645 4775694 -198309838 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 3211 100 20 11 chr5 4775736 4776176 -198309356 - MLT2A1 LTR ERVL 0 444 1 43342 84 7 9 chr5 4776176 4781843 -198303689 - HERVL-A1 LTR ERVL 0 5654 1 3078 118 18 11 chr5 4781843 4782284 -198303248 - MLT2A1 LTR ERVL 0 444 1 1803 196 17 6 chr5 4782744 4783097 -198302435 + MLT1A1 LTR MaLR 1 357 -8 201 298 21 32 chr5 4783372 4783466 -198302066 + MIR SINE MIR 71 163 -99 650 90 0 0 chr5 4783533 4783622 -198301910 + L1PA8 LINE L1 6084 6172 0 1607 164 7 31 chr5 4783998 4784314 -198301218 + AluJo SINE Alu 4 312 0 497 128 26 0 chr5 4784396 4784474 -198301058 - MER116 DNA Mariner 0 80 1 23 54 0 0 chr5 4784502 4784539 -198300993 + AT_rich Low_complexity Low_complexity 1 37 0 260 184 0 0 chr5 4785858 4785907 -198299625 - MER4-int LTR ERV1 -5436 1162 1114 597 249 0 0 chr5 4785932 4786109 -198299423 + (CA)n Simple_repeat Simple_repeat 2 178 0 251 267 124 0 chr5 4786764 4786869 -198298663 - MER45A DNA AcHobo 0 178 61 21 57 0 0 chr5 4786977 4787012 -198298520 + AT_rich Low_complexity Low_complexity 1 35 0 277 62 42 0 chr5 4789325 4789373 -198296159 + (GA)n Simple_repeat Simple_repeat 2 51 0 1343 215 0 19 chr5 4792588 4792853 -198292679 - AluJo SINE Alu -52 260 1 1604 114 76 76 chr5 4792901 4793190 -198292342 + AluSx SINE Alu 1 289 -23 627 218 156 0 chr5 4793229 4793408 -198292124 - MER20 DNA MER1_type -12 207 1 21 71 0 0 chr5 4794456 4794498 -198291034 + AT_rich Low_complexity Low_complexity 1 42 0 2609 222 88 5 chr5 4794973 4795634 -198289898 - L1MD1 LINE L1 -9 6233 5518 2417 146 5 16 chr5 4795727 4796104 -198289428 + THE1C LTR MaLR 1 373 -2 421 223 78 105 chr5 4796341 4796575 -198288957 + L1ME LINE L1 1339 1690 -5257 1886 147 29 0 chr5 4796575 4796854 -198288678 - AluSx SINE Alu -23 289 3 421 223 78 105 chr5 4796854 4796951 -198288581 + L1ME LINE L1 1690 1788 -5159 1755 276 67 88 chr5 4796966 4797927 -198287605 + L1ME LINE L1 396 1335 -5103 675 218 86 47 chr5 4797981 4798018 -198287514 + L1ME LINE L1 1899 1933 -5024 450 0 0 0 chr5 4798018 4798068 -198287464 + (CA)n Simple_repeat Simple_repeat 1 50 0 675 218 86 47 chr5 4798068 4798287 -198287245 + L1ME LINE L1 1933 2165 -4792 * 3241 225 38 25 chr5 4798280 4799226 -198286306 + L1MC3 LINE L1 5668 6625 -1160 268 83 0 62 chr5 4799248 4799296 -198286236 - MLT2A2 LTR ERVL -10 443 399 225 282 13 13 chr5 4800143 4800240 -198285292 + GA-rich Low_complexity Low_complexity 2 149 0 558 218 3 9 chr5 4801938 4802276 -198283256 + (TA)n Simple_repeat Simple_repeat 1 335 0 345 270 22 0 chr5 4802276 4802365 -198283167 - L1MC4 LINE L1 -1337 6705 6615 318 277 0 43 chr5 4802342 4802436 -198283096 + L1MC4 LINE L1 6614 6703 -1339 * 301 209 15 0 chr5 4802376 4802443 -198283089 - L1MCa LINE L1 -4363 2063 1996 * 1031 302 158 39 chr5 4802470 4803951 -198281581 - L2 LINE L2 -4 3309 1610 2436 201 43 23 chr5 4806107 4806713 -198278819 - L1MB8 LINE L1 -5 6173 5556 22 0 0 0 chr5 4807408 4807430 -198278102 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 4808638 4808661 -198276871 + AT_rich Low_complexity Low_complexity 1 23 0 205 128 43 0 chr5 4810184 4810231 -198275301 + GA-rich Low_complexity Low_complexity 2 50 0 27 0 0 0 chr5 4810336 4810363 -198275169 + AT_rich Low_complexity Low_complexity 1 27 0 5465 72 1 0 chr5 4810374 4811097 -198274435 - HERVL LTR ERVL -1637 4017 3294 256 368 43 29 chr5 4812459 4812739 -198272793 + LTR67 LTR ERVL 18 301 -256 237 346 15 31 chr5 4816798 4816928 -198268604 + L2 LINE L2 3181 3308 -5 1670 181 6 49 chr5 4817356 4817706 -198267826 - AluJb SINE Alu 0 312 1 887 230 165 42 chr5 4819653 4820091 -198265441 - MLT1D LTR MaLR -1 625 8 344 172 0 0 chr5 4822940 4823004 -198262528 + Tigger3(Golem) DNA MER2_type 42 105 -2924 * 947 152 12 0 chr5 4822995 4823160 -198262372 + Tigger3(Golem) DNA MER2_type 2802 2968 -61 1436 113 54 14 chr5 4823552 4823773 -198261759 + MER30 DNA MER1_type 1 230 0 318 345 92 6 chr5 4824392 4824566 -198260966 - MER5A DNA MER1_type 0 189 1 263 242 11 77 chr5 4824877 4824968 -198260564 + MIR SINE MIR 178 262 0 2199 115 142 0 chr5 4825022 4825395 -198260137 - MSTA LTR MaLR -2 426 1 418 171 0 27 chr5 4826186 4826297 -198259235 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 2033 126 129 26 chr5 4826732 4827120 -198258412 - MSTA LTR MaLR 0 428 1 1670 159 24 24 chr5 4827397 4827716 -198257816 - AluJb SINE Alu 0 312 1 235 322 16 33 chr5 4827838 4827959 -198257573 - L1M4 LINE L1 -3584 2562 2444 21 36 0 0 chr5 4828248 4828276 -198257256 + AT_rich Low_complexity Low_complexity 1 28 0 308 250 80 8 chr5 4829563 4829703 -198255829 + MLT1H LTR MaLR 421 593 -2 30 59 0 0 chr5 4829858 4829909 -198255623 + AT_rich Low_complexity Low_complexity 1 51 0 313 173 0 29 chr5 4830699 4830772 -198254760 - L1MCa LINE L1 -1339 6983 2006 2546 111 0 3 chr5 4830779 4831150 -198254382 - MLT2A1 LTR ERVL -74 370 1 284 230 0 124 chr5 4831150 4831263 -198254269 + L1MC3 LINE L1 6627 6725 -1060 757 203 0 14 chr5 4831263 4831401 -198254131 - FLAM_C SINE Alu -5 138 3 3042 244 58 22 chr5 4831402 4832427 -198253105 + L1MC3 LINE L1 6715 7775 -10 1089 285 95 58 chr5 4832438 4835211 -198250321 + L1MEc LINE L1 1069 3919 -2296 1473 308 58 9 chr5 4835861 4836847 -198248685 + L1MEc LINE L1 3881 4914 -1301 4350 188 11 26 chr5 4837523 4838997 -198246535 - L1MA6 LINE L1 0 6300 4850 921 162 11 0 chr5 4838989 4839174 -198246358 + L1 LINE L1 3961 4147 -1999 * 180 97 0 0 chr5 4839803 4839834 -198245698 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 4841933 4841963 -198243569 + AT_rich Low_complexity Low_complexity 1 30 0 2187 99 17 0 chr5 4842627 4842919 -198242613 - AluSc SINE Alu -12 297 1 336 24 0 0 chr5 4843671 4843712 -198241820 + (CA)n Simple_repeat Simple_repeat 2 42 0 248 197 45 45 chr5 4844433 4844499 -198241033 + MIR SINE MIR 87 152 -110 1483 237 2 14 chr5 4845150 4845588 -198239944 - L1 LINE L1 -1034 5112 4680 25 0 0 0 chr5 4845616 4845641 -198239891 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 4845662 4845685 -198239847 + AT_rich Low_complexity Low_complexity 1 23 0 2121 98 22 182 chr5 4845860 4846399 -198239133 + MLT2A2 LTR ERVL 1 453 0 2197 108 17 0 chr5 4848526 4848822 -198236710 - AluSq SINE Alu -12 301 1 2062 106 4 7 chr5 4848866 4849140 -198236392 - AluSg SINE Alu -18 292 20 1780 166 3 7 chr5 4851675 4851986 -198233546 - AluSx SINE Alu 0 310 1 23 0 0 0 chr5 4855192 4855215 -198230317 + AT_rich Low_complexity Low_complexity 1 23 0 2085 141 0 3 chr5 4858133 4858432 -198227100 + AluSx SINE Alu 1 298 -14 309 298 32 8 chr5 4861197 4861321 -198224211 - MIR SINE MIR -19 243 117 214 254 32 79 chr5 4862076 4862202 -198223330 - L2 LINE L2 -555 2759 2640 362 337 0 23 chr5 4862383 4862735 -198222797 + (CA)n Simple_repeat Simple_repeat 1 343 0 311 312 13 26 chr5 4862747 4862901 -198222631 + (CA)n Simple_repeat Simple_repeat 1 152 0 298 346 12 12 chr5 4862944 4863106 -198222426 + (CA)n Simple_repeat Simple_repeat 1 162 0 194 319 42 56 chr5 4865482 4865626 -198219906 + L2 LINE L2 3163 3304 -9 1571 215 24 6 chr5 4866410 4866749 -198218783 + MLT2C1 LTR ERVL 5 349 -48 245 178 0 22 chr5 4866800 4866862 -198218670 + MLT2C1 LTR ERVL 357 397 0 289 345 0 9 chr5 4867165 4867278 -198218254 + L2 LINE L2 3193 3304 -9 389 211 21 18 chr5 4868237 4868578 -198216954 + (TAGA)n Simple_repeat Simple_repeat 1 342 0 901 126 11 0 chr5 4868622 4868797 -198216735 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 584 70 12 0 chr5 4868827 4868913 -198216619 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 1911 122 3 59 chr5 4870090 4870394 -198215138 - AluSx SINE Alu -21 291 5 411 153 0 48 chr5 4874473 4874662 -198210870 + (TA)n Simple_repeat Simple_repeat 1 180 0 286 105 0 0 chr5 4874662 4874700 -198210832 + (CA)n Simple_repeat Simple_repeat 1 38 0 2063 128 28 0 chr5 4875676 4875966 -198209566 + AluSq SINE Alu 1 298 -15 2542 113 8 8 chr5 4876264 4876628 -198208904 + THE1B LTR MaLR 1 364 0 1647 207 114 34 chr5 4880407 4880847 -198204685 - L1MB2 LINE L1 -2 6169 5695 648 239 0 0 chr5 4880885 4881015 -198204517 + FLAM_A SINE Alu 1 130 -3 305 327 138 11 chr5 4881502 4881762 -198203770 - MLT1J1 LTR MaLR -1 445 153 3774 180 46 18 chr5 4885086 4885868 -198199664 - Tigger3(Golem) DNA MER2_type 0 3029 2226 328 235 25 12 chr5 4885866 4885947 -198199585 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 22 35 0 0 chr5 4887231 4887260 -198198272 + AT_rich Low_complexity Low_complexity 1 29 0 1943 167 6 13 chr5 4889677 4890075 -198195457 + AluSx SINE Alu 1 396 0 795 273 28 0 chr5 4890206 4890422 -198195110 - MER58A DNA MER1_type 0 224 3 194 327 0 0 chr5 4891930 4891982 -198193550 + L2 LINE L2 3195 3246 -67 23 0 0 0 chr5 4892123 4892146 -198193386 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr5 4892224 4892259 -198193273 + AT_rich Low_complexity Low_complexity 1 35 0 5819 107 53 6 chr5 4892574 4893474 -198192058 - L1PA10 LINE L1 -7 6161 5226 824 139 21 3 chr5 4893474 4893625 -198191907 + L1P LINE L1 3602 3750 -2396 359 266 186 0 chr5 4893973 4894097 -198191435 - LTR16C LTR ERVL -248 243 97 1965 142 44 0 chr5 4894255 4894550 -198190982 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 4894809 4894832 -198190700 + AT_rich Low_complexity Low_complexity 1 23 0 250 296 57 0 chr5 4894869 4895028 -198190504 + L1MCc LINE L1 1369 1536 -4887 188 301 0 0 chr5 4895093 4895166 -198190366 - L2 LINE L2 0 3272 3200 210 191 0 0 chr5 4899815 4899857 -198185675 + T-rich Low_complexity Low_complexity 1 42 0 235 231 19 0 chr5 4901071 4901123 -198184409 + GA-rich Low_complexity Low_complexity 4 56 0 2128 82 11 4 chr5 4901298 4901600 -198183932 + AluY SINE Alu 1 304 0 21398 163 21 18 chr5 4902889 4905579 -198179953 + L1M1 LINE L1 12 2693 -4872 2472 170 26 5 chr5 4905579 4905996 -198179536 + MSTA LTR MaLR 1 426 -2 21398 163 21 18 chr5 4905996 4907294 -198178238 + L1M1 LINE L1 2693 4018 -3547 1286 142 5 5 chr5 4907294 4907512 -198178020 + L1MA2 LINE L1 6087 6304 0 21398 163 21 18 chr5 4907512 4907529 -198178003 + L1M1 LINE L1 4018 4033 -3532 2500 181 49 19 chr5 4907551 4908038 -198177494 + LTR26B LTR ERV1 30 531 0 2244 135 0 0 chr5 4909702 4910014 -198175518 + AluSx SINE Alu 1 312 0 5504 144 19 32 chr5 4910591 4911526 -198174006 + MER49 LTR ERV1 1 923 0 255 224 15 15 chr5 4911839 4911906 -198173626 + GA-rich Low_complexity Low_complexity 2 68 0 5515 162 12 17 chr5 4912605 4912963 -198172569 - L1PB1 LINE L1 0 6151 5793 311 18 71 0 chr5 4912963 4913019 -198172513 + (TA)n Simple_repeat Simple_repeat 2 61 0 5515 162 12 17 chr5 4913019 4914397 -198171135 - L1PB1 LINE L1 -358 5793 4427 * 5761 217 13 4 chr5 4914396 4915683 -198169849 + L1PB1 LINE L1 4516 5814 -1751 820 153 0 16 chr5 4916566 4916690 -198168842 - FLAM_C SINE Alu -11 122 1 24 0 0 0 chr5 4917266 4917290 -198168242 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 4917711 4917742 -198167790 + AT_rich Low_complexity Low_complexity 1 31 0 191 250 0 16 chr5 4917757 4917821 -198167711 + CT-rich Low_complexity Low_complexity 3 65 0 297 0 0 0 chr5 4918710 4918743 -198166789 + (TG)n Simple_repeat Simple_repeat 1 33 0 244 190 17 0 chr5 4918922 4918980 -198166552 + MER113 DNA MER1_type? 159 217 -304 1304 201 41 106 chr5 4919557 4919974 -198165558 + MLT1B LTR MaLR 1 390 0 342 290 38 30 chr5 4920017 4920148 -198165384 + L2 LINE L2 3182 3313 0 2152 196 27 7 chr5 4920999 4921413 -198164119 + MSTB LTR MaLR 1 422 -4 184 315 0 19 chr5 4924769 4924823 -198160709 + L2 LINE L2 3210 3262 -10 863 213 80 36 chr5 4927769 4928146 -198157386 - MLT1E1 LTR MaLR -2 591 174 1216 241 40 54 chr5 4928146 4928516 -198157016 - MLT1A1 LTR MaLR 0 365 1 863 213 80 36 chr5 4928516 4928587 -198156945 - MLT1E1 LTR MaLR -419 174 108 345 271 37 28 chr5 4928556 4928663 -198156869 - MLT1E LTR MaLR -427 166 59 * 426 313 56 0 chr5 4928947 4929145 -198156387 + LTR16C LTR ERVL 283 491 0 1502 183 54 0 chr5 4929205 4929447 -198156085 - MLT1C LTR MaLR -12 455 195 192 40 0 0 chr5 4929447 4929472 -198156060 + (TG)n Simple_repeat Simple_repeat 2 26 0 1502 183 54 0 chr5 4929472 4929508 -198156024 - MLT1C LTR MaLR -272 195 162 1137 167 15 0 chr5 4929576 4929780 -198155752 + L1MA4 LINE L1 6060 6266 -34 7650 246 61 45 chr5 4929782 4930534 -198154998 - L1 LINE L1 -1849 4501 3763 2031 125 3 0 chr5 4930534 4930830 -198154702 - AluY SINE Alu -4 307 11 7650 246 61 45 chr5 4930830 4932495 -198153037 - L1 LINE L1 -2587 3763 2127 2027 121 24 3 chr5 4932495 4932784 -198152748 - AluSx SINE Alu -17 295 1 7650 246 61 45 chr5 4932784 4933994 -198151538 - L1 LINE L1 -4223 2127 1053 1480 168 44 0 chr5 4933994 4934244 -198151288 + AluJb SINE Alu 43 303 -9 7650 246 61 45 chr5 4934244 4935311 -198150221 - L1 LINE L1 -5297 1053 5 211 209 45 0 chr5 4935420 4935487 -198150045 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 272 298 24 0 chr5 4935489 4935573 -198149959 + L1MEc LINE L1 118 203 -6193 331 359 18 12 chr5 4935612 4935779 -198149753 + L1MEc LINE L1 261 428 -5968 1090 278 35 12 chr5 4935945 4936283 -198149249 - L1MC/D LINE L1 -2208 5600 5255 284 309 36 47 chr5 4936397 4936675 -198148857 - L1MC/D LINE L1 -1115 5031 4757 2105 188 9 0 chr5 4936690 4937035 -198148497 - MER7A DNA MER2_type 0 346 1 507 311 117 30 chr5 4937201 4937802 -198147730 + L2 LINE L2 2662 3312 -1 489 296 5 7 chr5 4938273 4938736 -198146796 + (CA)n Simple_repeat Simple_repeat 1 461 0 254 292 6 0 chr5 4938794 4938955 -198146577 + (CA)n Simple_repeat Simple_repeat 1 162 0 186 189 0 0 chr5 4939483 4939520 -198146012 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 1840 121 10 34 chr5 4942203 4942501 -198143031 - AluSx SINE Alu -21 291 1 238 330 154 0 chr5 4943614 4943705 -198141827 - MIR SINE MIR -88 120 16 461 351 20 15 chr5 4944349 4944551 -198140981 + MIR SINE MIR 48 250 -12 747 188 0 0 chr5 4945161 4945337 -198140195 + (TG)n Simple_repeat Simple_repeat 2 177 0 290 340 10 0 chr5 4945999 4946102 -198139430 + MIR SINE MIR 146 249 -13 200 33 0 33 chr5 4947421 4947451 -198138081 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1473 181 63 20 chr5 4947456 4947484 -198138048 - AluJb SINE Alu 0 312 287 1068 44 22 39 chr5 4947484 4947666 -198137866 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1473 181 63 20 chr5 4947666 4947936 -198137596 - AluJb SINE Alu -25 287 1 2659 52 9 0 chr5 4948494 4948824 -198136708 + L1PA7 LINE L1 5817 6149 -5 4492 104 14 1 chr5 4948866 4949522 -198136010 + L1PB2 LINE L1 5486 6149 -2 424 270 15 7 chr5 4950688 4950825 -198134707 + (CA)n Simple_repeat Simple_repeat 2 139 0 406 294 106 42 chr5 4951387 4951652 -198133880 + L3b LINE CR1 1184 1465 -118 391 227 23 0 chr5 4951825 4951913 -198133619 - L1ME1 LINE L1 -20 6146 6057 352 173 111 0 chr5 4953154 4953235 -198132297 - L1MC4 LINE L1 -1339 6703 6614 309 262 71 0 chr5 4953251 4953335 -198132197 - L1MC4 LINE L1 -1339 6703 6614 300 267 47 0 chr5 4953271 4953357 -198132175 + L1MC4 LINE L1 6614 6703 -1339 * 613 166 6 30 chr5 4953477 4953646 -198131886 + CT-rich Low_complexity Low_complexity 1 165 0 25 0 0 0 chr5 4954617 4954642 -198130890 + AT_rich Low_complexity Low_complexity 1 25 0 2124 110 4 0 chr5 4954906 4955230 -198130302 - AluSx SINE Alu 0 325 1 491 191 48 40 chr5 4956328 4956454 -198129078 + MER5A DNA MER1_type 3 129 -60 1699 194 39 31 chr5 4956517 4956904 -198128628 + MLT1B LTR MaLR 1 390 0 2304 106 6 3 chr5 4956991 4957302 -198128230 + AluSx SINE Alu 1 312 0 198 323 85 15 chr5 4957695 4957825 -198127707 - MIR SINE MIR -44 218 80 23 0 0 0 chr5 4958208 4958231 -198127301 + AT_rich Low_complexity Low_complexity 1 23 0 439 253 88 24 chr5 4959874 4960044 -198125488 - L3b LINE CR1 -123 1460 1280 530 100 17 133 chr5 4960067 4960187 -198125345 - AluSg/x SINE Alu -17 292 187 1820 103 0 9 chr5 4960187 4960420 -198125112 - AluSc SINE Alu -78 231 1 338 264 75 57 chr5 4962236 4962395 -198123137 - LTR16A1 LTR ERVL -30 427 266 991 224 69 114 chr5 4962751 4963219 -198122313 - MLT1D LTR MaLR -16 434 4 2104 120 0 3 chr5 4964438 4964772 -198120760 + AluSx SINE Alu 1 333 0 258 186 147 85 chr5 4965485 4965614 -198119918 - MLT1H LTR MaLR -28 521 385 896 219 47 9 chr5 4966250 4966483 -198119049 + MLT1C LTR MaLR 1 242 -225 217 286 37 62 chr5 4966687 4966775 -198118757 + MIR SINE MIR 70 154 -108 1584 229 87 18 chr5 4966775 4967212 -198118320 - MLT1C LTR MaLR 0 467 1 217 286 37 62 chr5 4967212 4967284 -198118248 + MIR SINE MIR 154 226 -36 1916 155 0 10 chr5 4969577 4969886 -198115646 - AluSx SINE Alu -4 308 3 798 187 48 17 chr5 4969944 4970214 -198115318 - MLT1B LTR MaLR 0 390 6 21 0 0 0 chr5 4970251 4970272 -198115260 + AT_rich Low_complexity Low_complexity 1 21 0 802 186 19 86 chr5 4970344 4970379 -198115153 + MER58A DNA MER1_type 29 65 -2355 2305 41 0 11 chr5 4970379 4970647 -198114885 - AluY SINE Alu -5 306 42 802 186 19 86 chr5 4970647 4970821 -198114711 + MER58A DNA MER1_type 65 224 0 896 196 121 46 chr5 4970826 4971107 -198114425 + MER33 DNA MER1_type 1 302 -22 1131 111 0 0 chr5 4971722 4971875 -198113657 + AluSq SINE Alu 153 305 -8 200 173 19 19 chr5 4971889 4971941 -198113591 + T-rich Low_complexity Low_complexity 2 53 0 231 353 7 0 chr5 4972685 4972821 -198112711 + (CA)n Simple_repeat Simple_repeat 1 137 0 1381 178 67 38 chr5 4973072 4973277 -198112255 - MER47A DNA MER2_type -1969 354 134 642 222 0 0 chr5 4973277 4973394 -198112138 + FLAM_C SINE Alu 1 117 -16 1381 178 67 38 chr5 4973394 4973531 -198112001 - MER47A DNA MER2_type -2189 134 2 300 316 89 41 chr5 4974687 4975149 -198110383 + L1MC/D LINE L1 5254 5737 -2071 357 291 96 25 chr5 4976588 4976787 -198108745 + MIR SINE MIR 32 244 -18 1552 209 3 0 chr5 4977669 4978127 -198107405 - AluJo SINE Alu 0 465 7 5730 123 22 2 chr5 4978144 4979019 -198106513 + L1PA13 LINE L1 5279 6160 -3 240 60 80 0 chr5 4979652 4979702 -198105830 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2106 94 7 0 chr5 4979703 4979979 -198105553 - AluSp SINE Alu -35 278 1 810 193 92 18 chr5 4981095 4981313 -198104219 + MER96B DNA MER1_type? 3 236 -181 247 179 30 15 chr5 4981482 4981549 -198103983 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2726 211 58 53 chr5 4983163 4984043 -198101489 + L1ME2 LINE L1 5280 6163 -1 327 346 0 7 chr5 4984647 4984783 -198100749 - L2 LINE L2 0 3272 3138 2022 116 16 7 chr5 4985333 4985636 -198099896 - AluSc SINE Alu -1 308 3 1741 168 0 29 chr5 4987742 4988058 -198097474 - AluJb SINE Alu -5 307 1 398 304 7 15 chr5 4988852 4988987 -198096545 - MIR SINE MIR -55 153 20 184 276 161 0 chr5 4990588 4990675 -198094857 - MIR SINE MIR -131 131 31 276 204 0 0 chr5 4992364 4992418 -198093114 - L1PA11 LINE L1 -1028 5118 5065 5800 130 16 4 chr5 4992418 4993453 -198092079 + L1PA11 LINE L1 5129 6174 0 231 387 15 0 chr5 4993725 4993862 -198091670 + MIR SINE MIR 17 155 -107 501 198 0 0 chr5 4994543 4994644 -198090888 - AluJb SINE Alu 0 312 212 2197 118 0 3 chr5 4996295 4996591 -198088941 - AluSx SINE Alu -17 295 1 2228 174 46 16 chr5 4996739 4997240 -198088292 - L1MA9 LINE L1 -6 6306 5791 458 265 53 0 chr5 4997095 4997265 -198088267 - L1PA15 LINE L1 -227 5938 5760 459 246 49 0 chr5 4997391 4997513 -198088019 - MIR SINE MIR -71 191 64 353 125 0 0 chr5 4997554 4997610 -198087922 - U2 snRNA snRNA -128 60 5 5002 146 3 8 chr5 4997610 4998491 -198087041 + L1PA10 LINE L1 4088 4964 -1182 1934 133 47 9 chr5 4998494 4998833 -198086699 - THE1C LTR MaLR -23 352 1 6342 92 8 1 chr5 4998841 5000017 -198085515 + L1PA10 LINE L1 4966 6157 -11 2591 42 0 6 chr5 5001796 5002109 -198083423 + AluY SINE Alu 1 311 0 24 0 0 0 chr5 5004334 5004358 -198081174 + AT_rich Low_complexity Low_complexity 1 24 0 5080 19 3 0 chr5 5006544 5007133 -198078399 + L1PA3 LINE L1 5565 6155 0 34 24 0 0 chr5 5007137 5007178 -198078354 + AT_rich Low_complexity Low_complexity 1 41 0 2449 183 41 33 chr5 5008086 5008590 -198076942 + MLT2B3 LTR ERVL 2 512 -42 435 100 0 0 chr5 5008590 5008660 -198076872 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2449 183 41 33 chr5 5008660 5008696 -198076836 + MLT2B3 LTR ERVL 512 546 -8 262 236 0 22 chr5 5008697 5008786 -198076746 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 753 209 0 37 chr5 5008813 5008976 -198076556 - MER2 DNA MER2_type -183 162 6 279 272 172 28 chr5 5009959 5010139 -198075393 + MLT1H LTR MaLR 79 284 -265 2055 111 50 10 chr5 5010573 5010871 -198074661 - AluSg SINE Alu 0 310 1 27 62 0 0 chr5 5011176 5011224 -198074308 + AT_rich Low_complexity Low_complexity 1 48 0 877 238 49 8 chr5 5011371 5011615 -198073917 + LTR53 LTR ERVL 1 254 -265 406 177 62 9 chr5 5011619 5011732 -198073800 + MLT1A1 LTR MaLR 5 123 -242 1138 216 0 4 chr5 5011932 5012177 -198073355 + MLT1A1 LTR MaLR 122 365 0 1028 203 103 0 chr5 5012180 5012422 -198073110 + LTR53 LTR ERVL 253 519 0 2385 104 0 0 chr5 5013249 5013558 -198071974 - AluSx SINE Alu -3 309 1 309 89 0 0 chr5 5013622 5013638 -198071894 + (CA)n Simple_repeat Simple_repeat 1 61 0 309 89 0 0 chr5 5013638 5013683 -198071849 + (CA)n Simple_repeat Simple_repeat 2 46 0 1145 279 91 66 chr5 5013709 5014806 -198070726 - L1MCc LINE L1 -4403 2719 1651 396 0 0 0 chr5 5014806 5014850 -198070682 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1145 279 91 66 chr5 5014850 5015745 -198069787 - L1MCc LINE L1 -5471 1651 457 1147 289 63 20 chr5 5016034 5016591 -198068941 - L1MCc LINE L1 -5824 599 19 318 203 14 40 chr5 5016611 5016666 -198068866 + L2 LINE L2 3234 3288 -25 2437 76 0 25 chr5 5016666 5016981 -198068551 - AluY SINE Alu -4 307 1 318 203 14 40 chr5 5016981 5016999 -198068533 + L2 LINE L2 3288 3305 -8 214 200 0 0 chr5 5017714 5017754 -198067778 + T-rich Low_complexity Low_complexity 1 40 0 289 230 40 0 chr5 5019519 5019593 -198065939 + MER89 LTR ERV1 11 87 -472 * 1476 214 14 6 chr5 5019568 5019928 -198065604 + MER89 LTR ERV1 197 559 0 40 0 0 0 chr5 5021604 5021644 -198063888 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr5 5022638 5022662 -198062870 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 431 333 6 0 chr5 5023333 5023498 -198062034 - MER63B DNA MER1_type -270 166 1 2194 114 0 0 chr5 5023791 5024088 -198061444 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 5024629 5024650 -198060882 + AT_rich Low_complexity Low_complexity 1 21 0 452 84 0 14 chr5 5024707 5024778 -198060754 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 232 235 23 68 chr5 5024780 5024912 -198060620 + L1 LINE L1 3797 3922 -2224 586 306 108 54 chr5 5024941 5025516 -198060016 + L1ME3 LINE L1 3949 4554 -1592 590 292 70 46 chr5 5026440 5027476 -198058056 + L1ME3 LINE L1 4800 5858 -304 1816 205 30 5 chr5 5027494 5027898 -198057634 + MLT2C2 LTR ERVL 3 416 -48 1328 185 110 31 chr5 5028181 5028500 -198057032 + MER2 DNA MER2_type 1 344 0 1063 144 0 12 chr5 5028507 5028698 -198056834 - AluSg/x SINE Alu 0 312 134 2048 140 0 0 chr5 5028698 5028990 -198056542 - AluSg SINE Alu -17 293 2 538 264 42 14 chr5 5029292 5029436 -198056096 - MER5B DNA MER1_type -12 166 19 45 34 0 0 chr5 5030364 5030423 -198055109 + AT_rich Low_complexity Low_complexity 1 59 0 404 242 30 0 chr5 5032829 5032928 -198052604 + MIR SINE MIR 110 211 -51 1114 305 32 29 chr5 5032944 5033386 -198052146 - L2 LINE L2 -1045 2269 1827 1983 154 0 3 chr5 5033628 5033927 -198051605 + AluSx SINE Alu 1 298 -14 2679 225 72 115 chr5 5034355 5035770 -198049762 - MLT1A1-int LTR MaLR -13 1358 5 1326 227 16 40 chr5 5035774 5036148 -198049384 - MLT1A1 LTR MaLR 0 365 1 2107 218 67 19 chr5 5036168 5036666 -198048866 - MLT1E1 LTR MaLR -11 643 109 1778 201 41 41 chr5 5036666 5037133 -198048399 + MLT1C LTR MaLR 1 467 0 2107 218 67 19 chr5 5037133 5037248 -198048284 - MLT1E1 LTR MaLR -545 109 1 2486 119 11 0 chr5 5037378 5037749 -198047783 + THE1C LTR MaLR 1 375 0 358 240 16 8 chr5 5037781 5037874 -198047658 + MIR3 SINE MIR 105 199 -9 21 57 0 0 chr5 5038347 5038382 -198047150 + AT_rich Low_complexity Low_complexity 1 35 0 240 176 0 0 chr5 5038414 5038482 -198047050 + (TA)n Simple_repeat Simple_repeat 1 68 0 386 176 0 35 chr5 5039732 5039817 -198045715 - MER3 DNA MER1_type -2 207 126 957 161 57 0 chr5 5039820 5040031 -198045501 + L1MB3 LINE L1 5669 5891 -292 810 198 21 66 chr5 5040096 5040384 -198045148 - L1MA4 LINE L1 -1 6299 6025 195 267 35 69 chr5 5040568 5040684 -198044848 - MIR SINE MIR -116 146 35 28 0 0 0 chr5 5041918 5041946 -198043586 + AT_rich Low_complexity Low_complexity 1 28 0 3348 207 7 7 chr5 5042077 5042830 -198042702 - L1 LINE L1 -1884 4262 3510 4627 176 47 7 chr5 5042837 5044039 -198041493 + L1PA16 LINE L1 4900 6159 -7 2170 117 48 31 chr5 5045313 5045671 -198039861 - THE1B LTR MaLR 0 364 1 320 357 24 18 chr5 5045681 5045849 -198039683 + MIR SINE MIR 66 234 -28 243 290 117 51 chr5 5046345 5046559 -198038973 - L2 LINE L2 -812 2502 2275 1845 131 25 0 chr5 5246696 5246978 -197838554 - AluY SINE Alu -22 289 1 547 193 82 7 chr5 5247746 5247881 -197837651 + Charlie4 DNA MER1_type 5 149 -1812 230 208 125 0 chr5 5248218 5248290 -197837242 + L2 LINE L2 1135 1215 -2099 1346 262 105 62 chr5 5248299 5248701 -197836831 + L2 LINE L2 1326 1709 -1605 2088 113 3 0 chr5 5248701 5249001 -197836531 - AluSq SINE Alu -12 301 1 1346 262 105 62 chr5 5249001 5249075 -197836457 + L2 LINE L2 1709 1778 -1536 2057 148 0 0 chr5 5249075 5249386 -197836146 - AluSx SINE Alu -1 311 1 1346 262 105 62 chr5 5249386 5249756 -197835776 + L2 LINE L2 1778 2209 -1105 1672 118 0 0 chr5 5249786 5250024 -197835508 + AluSx SINE Alu 56 293 -19 2061 204 37 19 chr5 5250062 5250494 -197835038 + MER82 DNA MER2_type 37 476 -177 1465 186 45 13 chr5 5250514 5250829 -197834703 - MLT1A1 LTR MaLR -36 431 1 233 235 0 141 chr5 5250898 5250927 -197834605 + MER82 DNA MER2_type 581 612 -41 2230 97 0 3 chr5 5250927 5251226 -197834306 + AluSq SINE Alu 1 298 -15 233 235 0 141 chr5 5251226 5251281 -197834251 + MER82 DNA MER2_type 612 653 0 2035 262 85 19 chr5 5251290 5251735 -197833797 + L2 LINE L2 2227 2641 -672 1603 166 49 11 chr5 5251735 5252019 -197833513 - AluJo SINE Alu -17 295 1 2035 262 85 19 chr5 5252019 5252589 -197832943 + L2 LINE L2 2641 3313 0 287 248 176 0 chr5 5252591 5252744 -197832788 - L1M4 LINE L1 -1303 4843 4664 1743 203 15 3 chr5 5252765 5253090 -197832442 + MLT1A1 LTR MaLR 36 364 -1 488 256 84 59 chr5 5253090 5253293 -197832239 - L1MEd LINE L1 -3044 3085 2878 2252 89 7 3 chr5 5253465 5253768 -197831764 - AluSq SINE Alu -9 304 1 1370 183 36 36 chr5 5253801 5254102 -197831430 + AluJb SINE Alu 3 303 -9 489 174 12 0 chr5 5254162 5254248 -197831284 + HY1 scRNA scRNA 1 87 -25 356 306 113 18 chr5 5254377 5254606 -197830926 - L1MEd LINE L1 -5361 758 508 2614 23 3 0 chr5 5254620 5254930 -197830602 - AluY SINE Alu 0 311 1 21 36 0 0 chr5 5256712 5256740 -197828792 + AT_rich Low_complexity Low_complexity 1 28 0 1851 115 39 11 chr5 5257827 5258113 -197827419 + AluSq SINE Alu 1 294 -19 347 239 142 45 chr5 5259464 5259619 -197825913 - MIR SINE MIR -87 175 6 1333 167 123 0 chr5 5260442 5260718 -197824814 + MER2 DNA MER2_type 10 319 -26 771 222 81 0 chr5 5261124 5261309 -197824223 + Charlie1a DNA MER1_type 5 204 -1251 1529 168 28 7 chr5 5261335 5261620 -197823912 + AluJo SINE Alu 1 291 -21 1119 154 254 7 chr5 5261621 5261900 -197823632 + Charlie1a DNA MER1_type 739 1086 -369 1282 168 16 29 chr5 5261915 5262159 -197823373 + AluJo SINE Alu 1 241 -71 3878 137 49 25 chr5 5262160 5262301 -197823231 - MER50 LTR ERV1 -23 711 575 2181 101 0 7 chr5 5262301 5262609 -197822923 + AluSx SINE Alu 1 306 -6 3878 137 49 25 chr5 5262609 5263161 -197822371 - MER50 LTR ERV1 -159 575 1 396 138 0 0 chr5 5263161 5263219 -197822313 + AluJo SINE Alu 238 295 -7 1706 226 96 35 chr5 5263506 5263737 -197821795 + MLT1E2 LTR MaLR 1 216 -410 1850 131 30 0 chr5 5263737 5264035 -197821497 + AluSx SINE Alu 1 307 -5 1706 226 96 35 chr5 5264035 5264391 -197821141 + MLT1E2 LTR MaLR 216 619 -7 371 342 45 42 chr5 5264540 5264612 -197820920 + MLT1I LTR MaLR 44 114 -295 3138 122 75 58 chr5 5264612 5265081 -197820451 + MER39B LTR ERV1 5 489 -164 1629 155 30 0 chr5 5265081 5265352 -197820180 + AluJo SINE Alu 12 290 -22 3138 122 75 58 chr5 5265352 5265519 -197820013 + MER39B LTR ERV1 489 652 -1 371 342 45 42 chr5 5265519 5265759 -197819773 + MLT1I LTR MaLR 114 357 -52 1635 176 0 31 chr5 5265860 5266178 -197819354 + AluJb SINE Alu 1 308 -4 1419 171 89 0 chr5 5266652 5266910 -197818622 - MER50 LTR ERV1 -23 711 431 668 80 23 0 chr5 5266921 5267009 -197818523 - THE1C LTR MaLR -285 90 1 1751 123 31 0 chr5 5267353 5267613 -197817919 - MER50 LTR ERV1 -466 268 1 280 238 60 24 chr5 5268206 5268290 -197817242 + MLT1L LTR MaLR 527 613 -2 2804 101 0 5 chr5 5268476 5268853 -197816679 - THE1C LTR MaLR 0 375 1 986 216 96 96 chr5 5269385 5269853 -197815679 - LTR34 LTR ERV1 -4 695 136 435 180 72 18 chr5 5269931 5270042 -197815490 - MER4A LTR ERV1 -547 117 1 351 261 45 9 chr5 5270144 5270255 -197815277 + Charlie5 DNA MER1_type 34 148 -2464 2157 99 10 0 chr5 5270257 5270559 -197814973 + AluSx SINE Alu 1 305 -7 2330 187 57 41 chr5 5270565 5270918 -197814614 + Charlie5 DNA MER1_type 1975 2344 -280 2045 126 10 0 chr5 5270918 5271220 -197814312 - AluSx SINE Alu -7 305 1 2330 187 57 41 chr5 5271220 5271476 -197814056 + Charlie5 DNA MER1_type 2344 2594 -30 231 217 0 0 chr5 5271960 5272006 -197813526 - MIR SINE MIR -115 147 102 4907 161 48 9 chr5 5272010 5272872 -197812660 - MER54A LTR ERVL -6 895 1 2255 85 7 0 chr5 5273372 5273667 -197811865 - AluSx SINE Alu -15 297 1 1876 146 0 10 chr5 5273741 5274066 -197811466 - AluSx SINE Alu 0 312 1 2052 116 0 0 chr5 5274605 5274899 -197810633 - AluSx SINE Alu -18 294 1 1590 180 3 10 chr5 5275048 5275343 -197810189 - AluJo SINE Alu -19 293 1 2186 108 0 0 chr5 5275703 5276009 -197809523 + AluSx SINE Alu 1 306 -6 1813 152 13 3 chr5 5276326 5276629 -197808903 + AluJb SINE Alu 1 306 -6 2225 84 0 7 chr5 5276637 5276934 -197808598 + AluSg SINE Alu 3 297 -13 1768 113 55 4 chr5 5277321 5277595 -197807937 + AluSx SINE Alu 1 288 -24 2185 144 34 3 chr5 5278255 5278610 -197806922 + MER47A DNA MER2_type 1 366 0 1745 169 3 13 chr5 5278814 5278996 -197806536 - AluJo SINE Alu -1 311 132 2150 105 7 0 chr5 5278996 5279292 -197806240 - AluSg SINE Alu -12 298 1 1745 169 3 13 chr5 5279292 5279423 -197806109 - AluJo SINE Alu -180 132 1 2102 125 0 3 chr5 5279511 5279816 -197805716 - AluJb SINE Alu 0 312 9 246 232 295 11 chr5 5279896 5279991 -197805541 - MIR SINE MIR -55 153 32 1408 116 61 2 chr5 5280987 5281225 -197804307 + L1PB3 LINE L1 5663 5908 -246 328 324 14 28 chr5 5282416 5282561 -197802971 - MIR SINE MIR -35 227 85 377 281 57 62 chr5 5282656 5282866 -197802666 - MIR SINE MIR -43 219 11 1447 58 48 14 chr5 5283778 5283985 -197801547 - AluSq SINE Alu -21 292 79 315 281 86 97 chr5 5284121 5284481 -197801051 + L1M4c LINE L1 947 1302 -5082 352 301 18 0 chr5 5284481 5284621 -197800911 + GA-rich Low_complexity Low_complexity 1 142 0 411 212 24 0 chr5 5285811 5285896 -197799636 + MIR3 SINE MIR 73 159 -49 200 205 0 0 chr5 5286289 5286328 -197799204 + (CAT)n Simple_repeat Simple_repeat 1 39 0 23 0 0 0 chr5 5287650 5287673 -197797859 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 5287739 5287783 -197797749 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 5287806 5287851 -197797681 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1127 259 84 39 chr5 5288613 5288995 -197796537 - L3 LINE CR1 -108 1469 1071 1781 122 0 11 chr5 5289051 5289313 -197796219 + AluSx SINE Alu 1 259 -53 473 320 39 6 chr5 5290665 5290843 -197794689 + MIR3 SINE MIR 25 208 0 718 112 0 90 chr5 5290872 5291006 -197794526 - AluSx SINE Alu 0 310 189 938 106 0 8 chr5 5291017 5291149 -197794383 - AluSx SINE Alu -176 137 7 1375 190 58 48 chr5 5291228 5291607 -197793925 - MLT1C LTR MaLR 0 467 85 1960 125 0 10 chr5 5291895 5292190 -197793342 + AluSx SINE Alu 12 303 -9 273 280 109 7 chr5 5292266 5292405 -197793127 + MIR SINE MIR 16 164 -69 34 24 0 0 chr5 5292506 5292547 -197792985 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 5293069 5293103 -197792429 + AT_rich Low_complexity Low_complexity 1 34 0 2239 102 3 0 chr5 5293485 5293789 -197791743 - AluSc SINE Alu -4 305 1 301 33 7 7 chr5 5294028 5294079 -197791453 - MADE1 DNA Mariner 0 80 47 581 278 39 42 chr5 5294172 5294378 -197791154 - MIR SINE MIR -57 205 1 193 169 68 34 chr5 5294502 5294561 -197790971 - MIR SINE MIR -36 226 166 306 248 57 38 chr5 5295106 5295211 -197790321 - L1ME4a LINE L1 -3 6118 6012 414 301 28 21 chr5 5295465 5295608 -197789924 - MIR3 SINE MIR -46 162 19 223 217 29 29 chr5 5296213 5296282 -197789250 + T-rich Low_complexity Low_complexity 4 72 0 21 0 0 0 chr5 5298423 5298444 -197787088 + AT_rich Low_complexity Low_complexity 1 21 0 183 273 18 18 chr5 5298487 5298542 -197786990 - MIR3 SINE MIR -144 64 10 2184 100 7 3 chr5 5299017 5299308 -197786224 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr5 5301838 5301861 -197783671 + AT_rich Low_complexity Low_complexity 1 23 0 1595 195 10 0 chr5 5303573 5303697 -197781835 + AluJb SINE Alu 3 124 -188 369 0 0 0 chr5 5303697 5303738 -197781794 + (CA)n Simple_repeat Simple_repeat 2 42 0 1595 195 10 0 chr5 5303738 5303905 -197781627 + AluJb SINE Alu 124 297 -15 2107 131 7 0 chr5 5304236 5304533 -197780999 + AluSx SINE Alu 2 300 -12 1918 122 0 48 chr5 5304924 5305235 -197780297 - AluSx SINE Alu -16 296 1 820 159 0 57 chr5 5305263 5305420 -197780112 - AluJo SINE Alu -154 158 11 213 267 0 0 chr5 5306232 5306277 -197779255 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 5306353 5306400 -197779132 + CT-rich Low_complexity Low_complexity 3 48 0 667 232 53 2 chr5 5306421 5306579 -197778953 - MIR SINE MIR -44 164 2 432 298 68 12 chr5 5307696 5307857 -197777675 - MIR3 SINE MIR -1 207 38 1304 153 23 23 chr5 5308107 5308323 -197777209 + AluJb SINE Alu 1 216 -96 418 167 127 40 chr5 5308323 5308449 -197777083 + Charlie5 DNA MER1_type 2447 2583 -29 187 301 63 56 chr5 5308463 5308606 -197776926 - L2 LINE L2 -1321 1993 1850 2475 147 26 5 chr5 5310352 5310775 -197774757 + Tigger2a DNA MER2_type 2 433 -1 2016 145 3 20 chr5 5311188 5311491 -197774041 + AluJb SINE Alu 2 299 -13 362 153 0 0 chr5 5312654 5312713 -197772819 - Alu SINE Alu -6 296 238 2660 139 56 20 chr5 5312713 5313266 -197772266 + MER50 LTR ERV1 1 573 -161 2188 104 0 10 chr5 5313266 5313575 -197771957 - AluSx SINE Alu -6 306 1 1771 170 10 35 chr5 5313868 5314180 -197771352 - AluJb SINE Alu -8 304 1 187 364 35 77 chr5 5314210 5314353 -197771179 - L2 LINE L2 -8 3264 3128 606 154 0 0 chr5 5314612 5314716 -197770816 + AluJb SINE Alu 202 305 -7 796 226 0 6 chr5 5315750 5315914 -197769618 - MER45A DNA AcHobo -15 163 1 590 115 0 21 chr5 5317480 5317576 -197767956 + FLAM_C SINE Alu 44 137 -6 530 169 22 88 chr5 5319088 5319224 -197766308 + L2 LINE L2 2731 2857 -457 1605 93 115 33 chr5 5319227 5319497 -197766035 + LTR9 LTR ERV1 1 292 -320 1646 105 4 13 chr5 5319497 5319726 -197765806 - AluSx SINE Alu -85 227 1 606 188 150 0 chr5 5319726 5319859 -197765673 + MER2 DNA MER2_type 193 345 0 2008 129 3 7 chr5 5319884 5320171 -197765361 - AluSx SINE Alu -26 286 1 1506 221 4 0 chr5 5321597 5321873 -197763659 - AluJo SINE Alu -14 298 22 256 316 40 0 chr5 5322571 5322647 -197762885 + MIR SINE MIR 30 108 -100 22 0 0 0 chr5 5323962 5323984 -197761548 + AT_rich Low_complexity Low_complexity 1 22 0 199 77 26 26 chr5 5324628 5324667 -197760865 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 355 367 190 29 chr5 5325628 5325939 -197759593 + L2 LINE L2 2910 3270 -2 468 320 82 5 chr5 5326116 5326310 -197759222 + MIR SINE MIR 1 209 -53 356 211 100 0 chr5 5326387 5326477 -197759055 - L1MC2 LINE L1 -29 6315 6217 1695 144 39 10 chr5 5326526 5326832 -197758700 - MER2 DNA MER2_type 0 345 31 200 33 0 33 chr5 5330283 5330313 -197755219 + (CA)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr5 5332830 5332854 -197752678 + (A)n Simple_repeat Simple_repeat 1 24 0 1939 93 4 0 chr5 5333521 5333791 -197751741 + L1PA8 LINE L1 5902 6172 0 601 287 79 14 chr5 5336202 5336418 -197749114 - MIR SINE MIR -1 261 32 579 203 8 8 chr5 5337389 5337507 -197748025 + L2 LINE L2 2680 2797 -517 289 210 37 0 chr5 5337543 5337624 -197747908 + (TA)n Simple_repeat Simple_repeat 2 85 0 401 81 0 40 chr5 5337641 5337715 -197747817 + MADE1 DNA Mariner 10 80 0 505 255 43 140 chr5 5337740 5338112 -197747420 + L2 LINE L2 2851 3186 -127 321 313 61 0 chr5 5340597 5340696 -197744836 + L2 LINE L2 3159 3263 -9 1292 198 55 32 chr5 5342043 5342391 -197743141 + MLT1A2 LTR MaLR 1 356 -18 270 194 0 0 chr5 5345003 5345065 -197740467 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4433 70 20 2 chr5 5345124 5345736 -197739796 + L1PA8A LINE L1 5482 6104 -27 1741 153 10 27 chr5 5345852 5346146 -197739386 + AluJb SINE Alu 1 289 -23 215 40 60 20 chr5 5347263 5347313 -197738219 + (CA)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr5 5348275 5348296 -197737236 + (A)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr5 5349103 5349135 -197736397 + (A)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 5351150 5351186 -197734346 + AT_rich Low_complexity Low_complexity 1 36 0 1579 199 14 0 chr5 5351186 5351472 -197734060 - AluJo SINE Alu -22 290 1 2372 108 0 13 chr5 5353394 5353710 -197731822 + AluSx SINE Alu 1 312 0 1122 209 158 73 chr5 5356080 5356587 -197728945 - MLT1F1 LTR MaLR -23 544 1 2241 106 7 3 chr5 5359445 5359746 -197725786 - AluSq SINE Alu -11 302 1 446 314 64 29 chr5 5359817 5360021 -197725511 + Charlie8 DNA MER1_type 4 214 -2203 474 18 0 0 chr5 5361921 5361976 -197723556 + (TA)n Simple_repeat Simple_repeat 1 55 0 2297 89 0 7 chr5 5361976 5362268 -197723264 - AluSq SINE Alu -21 292 3 962 184 128 28 chr5 5362272 5362522 -197723010 + MSTB1 LTR MaLR 156 430 -2 719 234 52 16 chr5 5367015 5367207 -197718325 - MER113 DNA MER1_type? -54 467 269 462 220 43 14 chr5 5367263 5367404 -197718128 - MER113 DNA MER1_type? -371 150 6 798 230 73 0 chr5 5369047 5369251 -197716281 + MIR SINE MIR 34 252 -10 548 217 14 29 chr5 5373218 5373356 -197712176 - MIR SINE MIR -109 153 18 309 51 0 0 chr5 5373356 5373395 -197712137 + (A)n Simple_repeat Simple_repeat 1 39 0 2123 98 3 10 chr5 5374726 5375021 -197710511 - AluSq SINE Alu -19 294 2 21 0 0 0 chr5 5375204 5375225 -197710307 + AT_rich Low_complexity Low_complexity 1 21 0 214 295 124 23 chr5 5376275 5376404 -197709128 + L2 LINE L2 3171 3312 -1 372 254 68 34 chr5 5376662 5376780 -197708752 + L2 LINE L2 3143 3264 -8 1999 127 3 7 chr5 5377617 5377909 -197707623 - AluSg SINE Alu -19 291 1 2037 137 10 0 chr5 5378096 5378389 -197707143 - AluSx SINE Alu -16 296 1 2502 186 21 13 chr5 5378693 5379161 -197706371 + MER70A LTR ERVL 1 472 0 543 239 0 0 chr5 5379168 5379313 -197706219 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 5380220 5380250 -197705282 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2181 101 4 0 chr5 5380250 5380527 -197705005 - AluSq SINE Alu -33 280 3 21 26 0 26 chr5 5380744 5380763 -197704769 + AT_rich Low_complexity Low_complexity 1 19 -19 2136 117 0 7 chr5 5380763 5381053 -197704479 - AluSx SINE Alu -24 288 1 21 26 0 26 chr5 5381053 5381072 -197704460 + AT_rich Low_complexity Low_complexity 19 38 0 2271 79 21 0 chr5 5381635 5381925 -197703607 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr5 5382452 5382473 -197703059 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 583 238 77 0 chr5 5382735 5382903 -197702629 - MIR SINE MIR -71 191 11 3765 141 106 83 chr5 5382982 5384011 -197701521 + pTR5 LTR ERV1 742 2025 -413 402 185 34 27 chr5 5384011 5384122 -197701410 + LTR30 LTR ERV1 375 642 -80 2177 115 3 0 chr5 5384122 5384435 -197701097 + pTR5 LTR ERV1 79 392 -2046 2170 92 28 57 chr5 5384966 5385283 -197700249 + AluSq SINE Alu 6 313 0 1779 164 28 104 chr5 5386587 5386844 -197698688 - MER45B DNA AcHobo -543 1038 832 2307 97 0 0 chr5 5386844 5387132 -197698400 - AluSx SINE Alu -24 288 1 1779 164 28 104 chr5 5387132 5387343 -197698189 - MER45B DNA AcHobo -749 832 606 1234 256 93 0 chr5 5387361 5387662 -197697870 - MER45B DNA AcHobo -711 329 1 531 31 0 0 chr5 5387863 5387928 -197697604 + (TATG)n Simple_repeat Simple_repeat 4 68 0 193 278 133 0 chr5 5389537 5389627 -197695905 - MIR SINE MIR -48 214 113 252 167 0 0 chr5 5389670 5389712 -197695820 + MER2 DNA MER2_type 1 42 -303 462 177 0 0 chr5 5389713 5389792 -197695740 + MER2 DNA MER2_type 1 79 -266 662 152 27 0 chr5 5389947 5390059 -197695473 + FLAM_A SINE Alu 20 134 -8 1961 115 10 20 chr5 5390139 5390435 -197695097 - AluSx SINE Alu -19 293 1 24 0 0 0 chr5 5390533 5390557 -197694975 + AT_rich Low_complexity Low_complexity 1 24 0 1282 100 11 11 chr5 5390847 5391027 -197694505 - AluSg/x SINE Alu -13 299 120 284 185 19 0 chr5 5391346 5391400 -197694132 + MER20 DNA MER1_type 159 213 -6 201 290 32 0 chr5 5392335 5392397 -197693135 + L2 LINE L2 2905 2968 -345 333 0 0 0 chr5 5393544 5393581 -197691951 + (T)n Simple_repeat Simple_repeat 1 37 0 510 239 28 34 chr5 5393888 5394064 -197691468 + MIR SINE MIR 18 192 -70 189 200 40 0 chr5 5394114 5394164 -197691368 - MIR SINE MIR -144 118 67 1685 117 58 21 chr5 5394196 5394487 -197691045 - AluSx SINE Alu -9 303 2 829 128 15 0 chr5 5394785 5394918 -197690614 + FRAM SINE Alu 18 152 -24 1694 143 4 19 chr5 5395867 5396125 -197689407 + AluJo SINE Alu 34 287 -25 1775 180 29 45 chr5 5396818 5397006 -197688526 + L1MB8 LINE L1 5757 5946 -232 2040 117 3 43 chr5 5397006 5397331 -197688201 - AluSx SINE Alu 0 312 1 1775 180 29 45 chr5 5397331 5397571 -197687961 + L1MB8 LINE L1 5946 6177 -1 974 182 6 0 chr5 5397717 5397876 -197687656 - AluJb SINE Alu -15 297 138 870 73 15 15 chr5 5397994 5398131 -197687401 + (GGAA)n Simple_repeat Simple_repeat 2 138 0 2416 82 0 25 chr5 5398222 5398541 -197686991 + AluSx SINE Alu 2 312 0 1903 183 64 43 chr5 5398542 5398793 -197686739 - MER74A LTR ERVL -111 447 203 1838 146 58 18 chr5 5398793 5399123 -197686409 + MER61A LTR ERV1 1 343 0 1903 183 64 43 chr5 5399123 5399289 -197686243 - MER74A LTR ERVL -355 203 18 2200 131 3 6 chr5 5399289 5399601 -197685931 + AluSx SINE Alu 1 311 -1 1903 183 64 43 chr5 5399601 5399620 -197685912 - MER74A LTR ERVL -540 18 1 1418 214 79 43 chr5 5399620 5400005 -197685527 - MLT1F1 LTR MaLR -41 526 132 2309 149 81 2 chr5 5400005 5400402 -197685130 - MSTC LTR MaLR 0 428 1 1418 214 79 43 chr5 5400402 5400518 -197685014 - MLT1F1 LTR MaLR -435 132 22 450 239 127 21 chr5 5400535 5400677 -197684855 - MSTC-int LTR MaLR 0 1371 1215 1566 142 0 73 chr5 5400891 5401193 -197684339 + AluJb SINE Alu 1 280 -32 341 341 121 0 chr5 5401223 5401396 -197684136 - MSTC-int LTR MaLR -486 885 692 983 141 29 73 chr5 5401637 5401843 -197683689 + MSTB LTR MaLR 1 197 -229 1398 177 4 4 chr5 5401851 5402099 -197683433 + AluJb SINE Alu 22 269 -43 1380 150 4 45 chr5 5402108 5402374 -197683158 - AluJo SINE Alu -57 255 1 287 125 0 0 chr5 5402374 5402414 -197683118 + MSTB LTR MaLR 389 428 0 675 292 68 13 chr5 5402414 5402722 -197682810 - MSTC-int LTR MaLR -770 601 277 840 200 36 0 chr5 5402737 5402902 -197682630 + FRAM SINE Alu 1 171 -5 293 248 147 8 chr5 5402910 5403039 -197682493 - MSTC-int LTR MaLR -1221 150 4 1110 261 105 51 chr5 5403051 5403362 -197682170 - MLT1F LTR MaLR 0 542 249 201 108 0 0 chr5 5403362 5403399 -197682133 + (CA)n Simple_repeat Simple_repeat 2 38 0 1110 261 105 51 chr5 5403399 5403475 -197682057 - MLT1F LTR MaLR -293 249 179 2220 107 50 50 chr5 5403475 5403573 -197681959 + THE1B LTR MaLR 1 98 -266 2125 112 0 3 chr5 5403573 5403869 -197681663 - AluSq SINE Alu -18 295 1 2220 107 50 50 chr5 5403869 5404134 -197681398 + THE1B LTR MaLR 97 364 0 1110 261 105 51 chr5 5404134 5404259 -197681273 - MLT1F LTR MaLR -363 179 1 243 191 87 95 chr5 5404312 5404438 -197681094 + L1MC4 LINE L1 7918 8042 0 1079 134 31 76 chr5 5405189 5405412 -197680120 + AluJb SINE Alu 86 298 -14 1287 131 149 62 chr5 5405617 5405655 -197679877 - MSTC LTR MaLR 0 365 332 1958 121 0 0 chr5 5405655 5405971 -197679561 + AluSx SINE Alu 1 316 0 1287 131 149 62 chr5 5405971 5406267 -197679265 - MSTC LTR MaLR -33 332 1 482 208 10 10 chr5 5406309 5406405 -197679127 + MLT2F LTR ERVL 1 96 -567 2179 105 0 22 chr5 5406532 5406847 -197678685 + AluSx SINE Alu 1 308 -4 873 163 7 13 chr5 5406852 5407048 -197678484 + FRAM SINE Alu 1 176 0 444 259 5 53 chr5 5407199 5407388 -197678144 + CT-rich Low_complexity Low_complexity 1 180 0 273 302 9 35 chr5 5408764 5408880 -197676652 + C-rich Low_complexity Low_complexity 3 115 0 528 168 84 8 chr5 5409141 5409272 -197676260 - LTR37A LTR ERV1 0 426 286 2085 115 10 0 chr5 5409374 5409679 -197675853 + AluSx SINE Alu 5 312 0 428 190 229 45 chr5 5410275 5410454 -197675078 + LTR37A LTR ERV1 8 219 -207 671 162 0 0 chr5 5410469 5410568 -197674964 - AluJ/FLAM SINE Alu -212 100 2 3405 169 50 72 chr5 5410615 5410866 -197674666 - MER72 LTR ERV1 0 722 467 1586 166 0 30 chr5 5410866 5411161 -197674371 - AluJo SINE Alu -26 286 1 3405 169 50 72 chr5 5411161 5411633 -197673899 - MER72 LTR ERV1 -255 467 15 323 270 27 20 chr5 5411659 5411807 -197673725 + LTR37A LTR ERV1 278 426 0 4345 148 31 37 chr5 5411818 5412624 -197672908 - MER4D LTR ERV1 0 903 103 1256 146 35 22 chr5 5412648 5412874 -197672658 - AluSx SINE Alu -83 229 1 821 122 0 0 chr5 5412874 5412989 -197672543 - MER4D LTR ERV1 -788 115 1 1641 77 4 17 chr5 5413417 5413651 -197671881 + AluSg/x SINE Alu 80 310 0 354 184 116 5 chr5 5413655 5413820 -197671712 + MER21A LTR ERV1 670 929 -2 290 88 62 12 chr5 5414363 5414443 -197671089 + (TAAA)n Simple_repeat Simple_repeat 1 84 0 915 123 43 49 chr5 5414446 5414609 -197670923 - AluJo SINE Alu -38 274 113 1628 147 16 48 chr5 5414822 5415136 -197670396 - AluSx SINE Alu -8 304 1 834 193 76 0 chr5 5415136 5415307 -197670225 + MLT1F1 LTR MaLR 22 205 -362 271 156 0 0 chr5 5415334 5415379 -197670153 + MLT1F LTR MaLR 498 542 0 346 223 93 39 chr5 5415379 5415574 -197669958 - L1MC4a LINE L1 -394 7414 7193 3856 166 11 59 chr5 5416398 5417157 -197668375 - MER72 LTR ERV1 0 722 1 1904 117 0 37 chr5 5417185 5417484 -197668048 - AluSx SINE Alu -24 288 1 722 220 128 32 chr5 5417557 5417691 -197667841 - MLT1C LTR MaLR 0 467 303 2043 114 117 30 chr5 5417691 5417732 -197667800 - MSTA LTR MaLR 0 428 392 2137 107 0 32 chr5 5417732 5418042 -197667490 + AluSq SINE Alu 1 300 -13 2043 114 117 30 chr5 5418042 5418394 -197667138 - MSTA LTR MaLR -36 392 1 722 220 128 32 chr5 5418394 5418477 -197667055 - MLT1C LTR MaLR -164 303 229 578 200 57 14 chr5 5418505 5418645 -197666887 - MLT1C LTR MaLR -321 184 39 1916 138 7 0 chr5 5418716 5419012 -197666520 + AluSx SINE Alu 3 300 -12 1824 122 0 48 chr5 5419399 5419710 -197665822 - AluSx SINE Alu -16 296 1 823 147 0 57 chr5 5419738 5419895 -197665637 - AluJo SINE Alu -154 158 11 1877 155 3 0 chr5 5420351 5420647 -197664885 + AluJb SINE Alu 1 297 -15 658 190 129 95 chr5 5421136 5421368 -197664164 + MIR SINE MIR 10 249 -13 2099 157 11 11 chr5 5421700 5422048 -197663484 + MLT2C1 LTR ERVL 1 348 -49 1859 167 42 50 chr5 5422048 5422432 -197663100 - MLT1B LTR MaLR 0 390 10 380 128 64 0 chr5 5422440 5422534 -197662998 + (TCTG)n Simple_repeat Simple_repeat 1 100 0 247 137 0 137 chr5 5422534 5422607 -197662925 + MLT2C1 LTR ERVL 458 520 0 2196 111 0 7 chr5 5422718 5423025 -197662507 - AluSx SINE Alu -7 305 1 2306 74 0 3 chr5 5423087 5423383 -197662149 - AluY SINE Alu -16 295 1 2195 98 3 0 chr5 5423383 5423679 -197661853 - AluSx SINE Alu -15 297 1 591 162 0 0 chr5 5423774 5423879 -197661653 - FRAM SINE Alu -8 168 64 2164 110 3 3 chr5 5423976 5424286 -197661246 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 5424286 5424307 -197661225 + AT_rich Low_complexity Low_complexity 1 21 0 1004 229 85 98 chr5 5424313 5424442 -197661090 + L1ME1 LINE L1 5692 5821 -345 2269 88 0 28 chr5 5424442 5424761 -197660771 - AluSg SINE Alu 0 310 1 1004 229 85 98 chr5 5424761 5425080 -197660452 + L1ME1 LINE L1 5821 6134 -32 686 151 19 0 chr5 5425081 5425187 -197660345 + FLAM_C SINE Alu 2 109 -34 1618 171 0 16 chr5 5425259 5425569 -197659963 - AluJo SINE Alu 0 312 8 1575 129 4 0 chr5 5426032 5426264 -197659268 - AluSq SINE Alu -14 299 67 447 208 50 0 chr5 5426551 5426652 -197658880 - MLT1H LTR MaLR 0 549 444 * 915 223 30 47 chr5 5426634 5426944 -197658588 - MLT1H LTR MaLR -248 307 30 199 217 0 0 chr5 5427676 5427722 -197657810 + L2 LINE L2 2911 2956 -316 226 333 0 0 chr5 5428868 5428940 -197656592 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 5429341 5429785 -197655747 + L1MB7 LINE L1 5579 6043 -141 1851 101 7 35 chr5 5429937 5430246 -197655286 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 5431365 5431408 -197654124 + AT_rich Low_complexity Low_complexity 1 43 0 2083 186 38 53 chr5 5431408 5431531 -197654001 + MLT1D LTR MaLR 1 124 -381 2009 101 10 10 chr5 5431531 5431551 -197653981 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 5431551 5431572 -197653960 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2009 101 10 10 chr5 5431572 5431849 -197653683 - AluSx SINE Alu -31 281 2 2083 186 38 53 chr5 5431849 5432230 -197653302 + MLT1D LTR MaLR 124 497 -8 967 242 54 0 chr5 5432414 5432637 -197652895 + L1MC4 LINE L1 6800 7034 -1008 1146 156 0 0 chr5 5432650 5432823 -197652709 - AluSq SINE Alu -140 173 1 2037 226 66 20 chr5 5432856 5433449 -197652083 + L1MC4 LINE L1 7043 7662 -380 291 227 93 0 chr5 5433495 5433570 -197651962 + L1MB4 LINE L1 5812 5893 -278 1381 149 149 15 chr5 5433570 5433831 -197651701 + AluJb SINE Alu 2 297 -5 2236 104 0 0 chr5 5433833 5434140 -197651392 + AluSx SINE Alu 3 309 -3 1410 160 73 7 chr5 5434149 5434437 -197651095 + L1MB4 LINE L1 5873 6179 -1 1181 167 26 106 chr5 5434479 5434586 -197650946 + L1MC4 LINE L1 7709 7823 -219 808 65 28 0 chr5 5434586 5434693 -197650839 + HY1 scRNA scRNA 2 111 -1 1181 167 26 106 chr5 5434693 5434706 -197650826 + L1MC4 LINE L1 7823 7835 -207 207 114 0 0 chr5 5434706 5434741 -197650791 + (TG)n Simple_repeat Simple_repeat 2 36 0 1181 167 26 106 chr5 5434741 5434757 -197650775 + L1MC4 LINE L1 7835 7851 -191 2278 99 0 0 chr5 5434757 5435060 -197650472 + AluSx SINE Alu 1 303 -9 1181 167 26 106 chr5 5435060 5435269 -197650263 + L1MC4 LINE L1 7851 8028 -14 3161 73 22 44 chr5 5435580 5436034 -197649498 + MLT2A1 LTR ERVL 1 444 0 830 235 105 17 chr5 5436129 5436423 -197649109 + L1ME3 LINE L1 5843 6162 0 1890 195 40 2 chr5 5437081 5437522 -197648010 - MER89 LTR ERV1 0 559 2 519 202 176 8 chr5 5437677 5437796 -197647736 + MER2 DNA MER2_type 206 344 -1 272 161 18 36 chr5 5438769 5438825 -197646707 - MLT1A2 LTR MaLR 0 374 320 1031 139 0 0 chr5 5438840 5438984 -197646548 - MLT1A2 LTR MaLR -227 147 4 1530 158 99 56 chr5 5439199 5439388 -197646144 + MER2 DNA MER2_type 9 219 -126 1739 132 35 17 chr5 5439388 5439676 -197645856 - AluJo SINE Alu -19 293 1 1530 158 99 56 chr5 5439676 5439809 -197645723 + MER2 DNA MER2_type 219 345 0 1898 129 3 7 chr5 5439834 5440121 -197645411 - AluSx SINE Alu -26 286 1 911 192 124 1 chr5 5440363 5440580 -197644952 - MLT1D LTR MaLR -2 503 234 419 127 0 0 chr5 5440580 5440635 -197644897 + AluSg/x SINE Alu 196 250 -62 530 238 56 75 chr5 5440894 5441010 -197644522 + L1MC5 LINE L1 7273 7390 -571 2069 104 0 52 chr5 5441010 5441338 -197644194 + AluSx SINE Alu 1 311 -1 530 238 56 75 chr5 5441338 5441689 -197643843 + L1MC5 LINE L1 7390 7613 -348 1741 170 7 0 chr5 5441806 5442100 -197643432 + AluSx SINE Alu 1 296 -16 926 216 56 173 chr5 5442276 5442617 -197642915 + L2 LINE L2 2709 3041 -272 637 39 0 0 chr5 5442617 5442695 -197642837 + AluY SINE Alu 221 298 -11 926 216 56 173 chr5 5442695 5442940 -197642592 + L2 LINE L2 3041 3313 0 21 0 0 0 chr5 5443427 5443448 -197642084 + AT_rich Low_complexity Low_complexity 1 21 0 211 226 151 0 chr5 5443517 5443570 -197641962 + MIR3 SINE MIR 127 187 -21 22 0 0 0 chr5 5443932 5443954 -197641578 + AT_rich Low_complexity Low_complexity 1 22 0 2016 117 0 0 chr5 5443966 5444323 -197641209 + AluSx SINE Alu 1 357 0 675 286 106 0 chr5 5444813 5445040 -197640492 + MIR SINE MIR 6 256 -6 460 292 99 5 chr5 5445477 5445669 -197639863 + MIR SINE MIR 1 210 -52 30 77 0 0 chr5 5446495 5446560 -197638972 + GC_rich Low_complexity Low_complexity 1 65 0 193 93 0 47 chr5 5446880 5446923 -197638609 + (GGGAGA)n Simple_repeat Simple_repeat 3 43 0 817 165 0 122 chr5 5448133 5448321 -197637211 - FRAM SINE Alu -1 165 1 232 222 11 78 chr5 5448780 5448870 -197636662 - MIR SINE MIR 0 262 179 282 268 65 89 chr5 5448981 5449227 -197636305 - MLT1K LTR MaLR -160 428 189 1464 150 59 28 chr5 5449404 5449567 -197635965 - AluJb SINE Alu -17 295 118 183 42 0 0 chr5 5449567 5449591 -197635941 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1464 150 59 28 chr5 5449591 5449713 -197635819 - AluJb SINE Alu -194 118 1 324 0 0 0 chr5 5449761 5449797 -197635735 + (TG)n Simple_repeat Simple_repeat 2 37 0 2211 99 0 0 chr5 5449976 5450269 -197635263 - AluSg1 SINE Alu -16 293 1 352 115 0 2 chr5 5450220 5450277 -197635255 - Alu SINE Alu -254 49 1 * 744 218 175 26 chr5 5450277 5450580 -197634952 + L1MC4 LINE L1 7689 8037 -5 1988 124 24 13 chr5 5450965 5451263 -197634269 - AluSx SINE Alu -11 301 1 286 355 40 0 chr5 5451606 5451730 -197633802 + L1MEd LINE L1 509 637 -5482 288 0 0 0 chr5 5451786 5451818 -197633714 + (TG)n Simple_repeat Simple_repeat 1 32 0 320 181 64 0 chr5 5451937 5452031 -197633501 + Charlie2 DNA MER1_type 2675 2774 -88 352 305 48 0 chr5 5452162 5452267 -197633265 + L2 LINE L2 3202 3311 -2 260 215 107 50 chr5 5452631 5452752 -197632780 - L1MC4 LINE L1 -5 8037 7910 295 107 57 45 chr5 5452766 5452943 -197632589 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 39 38 0 0 chr5 5452954 5453007 -197632525 + AT_rich Low_complexity Low_complexity 1 53 0 379 93 105 0 chr5 5453007 5453169 -197632363 + (TA)n Simple_repeat Simple_repeat 1 179 0 441 99 34 70 chr5 5453220 5453575 -197631957 + (TA)n Simple_repeat Simple_repeat 1 341 0 204 129 53 53 chr5 5453684 5453855 -197631677 + (TA)n Simple_repeat Simple_repeat 2 172 0 302 236 101 75 chr5 5454018 5454068 -197631464 - L1MC/D LINE L1 -2294 5491 5444 1864 158 3 13 chr5 5454068 5454378 -197631154 - AluJo SINE Alu -4 308 2 302 236 101 75 chr5 5454378 5454402 -197631130 - L1MC/D LINE L1 -2341 5444 5422 571 120 56 9 chr5 5454402 5454510 -197631022 - L1MB3 LINE L1 -4 6179 6067 302 236 101 75 chr5 5454510 5454633 -197630899 - L1MC/D LINE L1 -2363 5422 5288 228 280 220 38 chr5 5455183 5455315 -197630217 + MIR SINE MIR 82 237 -25 2146 99 74 42 chr5 5455315 5455668 -197629864 - THE1B LTR MaLR 0 364 1 705 252 52 0 chr5 5455839 5455994 -197629538 + AluJo SINE Alu 13 175 -137 775 198 99 11 chr5 5456617 5456880 -197628652 - Charlie1b DNA MER1_type -129 394 109 929 178 6 12 chr5 5456891 5457054 -197628478 + FRAM SINE Alu 1 162 -14 2669 155 18 26 chr5 5458952 5459560 -197625972 + pTR5 LTR ERV1 742 1344 -1094 4176 124 15 126 chr5 5459576 5460500 -197625032 + LTR12 LTR ERV1 5 826 0 778 231 61 47 chr5 5462195 5462407 -197623125 - MIR SINE MIR 0 262 48 570 184 56 90 chr5 5463114 5463380 -197622152 - L1MC5 LINE L1 -94 7867 7611 2414 63 0 20 chr5 5463437 5463736 -197621796 - AluY SINE Alu -17 294 2 24 0 0 0 chr5 5463740 5463764 -197621768 + AT_rich Low_complexity Low_complexity 1 24 0 718 186 0 0 chr5 5463764 5463882 -197621650 - FLAM_C SINE Alu -25 118 1 297 0 0 0 chr5 5464132 5464165 -197621367 + (TG)n Simple_repeat Simple_repeat 2 34 0 2209 117 0 3 chr5 5464616 5464915 -197620617 + AluSx SINE Alu 1 298 -14 507 90 0 13 chr5 5465316 5465394 -197620138 - AluS SINE Alu -236 77 1 243 149 0 0 chr5 5465400 5465447 -197620085 - MER2 DNA MER2_type -169 176 130 771 167 92 17 chr5 5465449 5465623 -197619909 + Tigger2 DNA MER2_type 6 192 -2526 265 81 177 0 chr5 5465693 5465755 -197619777 - Tigger2 DNA MER2_type -169 2549 2477 3673 132 82 20 chr5 5465813 5466517 -197619015 - Tigger2 DNA MER2_type -1970 748 1 1091 169 43 0 chr5 5466517 5466724 -197618808 + MER2 DNA MER2_type 130 345 0 767 242 81 40 chr5 5466730 5467069 -197618463 + L2 LINE L2 2709 3080 -233 590 39 13 0 chr5 5467069 5467146 -197618386 + AluY SINE Alu 224 301 -11 1613 134 12 73 chr5 5467640 5467968 -197617564 - MLT1B LTR MaLR -82 308 1 2403 72 3 0 chr5 5468048 5468341 -197617191 - AluSp SINE Alu -19 294 1 750 172 127 31 chr5 5468684 5469128 -197616404 - Charlie1 DNA MER1_type -1 2760 2186 3374 203 89 10 chr5 5469136 5470395 -197615137 + L1MB8 LINE L1 4810 6174 -4 712 184 6 34 chr5 5470393 5470555 -197614977 + L1ME LINE L1 5421 5574 -547 * 325 234 165 19 chr5 5470718 5470797 -197614735 - LTR41 LTR ERVL -592 181 115 180 0 0 0 chr5 5470797 5470817 -197614715 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 325 234 165 19 chr5 5470817 5470895 -197614637 - LTR41 LTR ERVL -658 115 1 2348 99 3 0 chr5 5471079 5471382 -197614150 - AluSq SINE Alu -9 304 1 2198 76 32 0 chr5 5471573 5471871 -197613661 - AluSp SINE Alu 0 307 1 1729 146 84 0 chr5 5472227 5472502 -197613030 - AluSx SINE Alu -14 298 1 248 111 0 0 chr5 5472708 5472744 -197612788 + L1MC3 LINE L1 7238 7273 -512 450 95 0 0 chr5 5472748 5472811 -197612721 - LTR3b LTR ERVK 0 500 438 1828 172 49 51 chr5 5472811 5473241 -197612291 - LTR3 LTR ERVK 0 429 1 1975 158 113 15 chr5 5473241 5473271 -197612261 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 5473271 5473292 -197612240 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 1975 158 113 15 chr5 5473292 5473723 -197611809 + L1MC3 LINE L1 7297 7777 -8 824 279 54 56 chr5 5474540 5474630 -197610902 - MLT1I LTR MaLR 0 409 320 1656 139 12 90 chr5 5474630 5474849 -197610683 + AluJo SINE Alu 1 189 -123 1863 135 30 20 chr5 5474849 5475152 -197610380 - AluSx SINE Alu -6 306 1 1656 139 12 90 chr5 5475152 5475255 -197610277 + AluJo SINE Alu 189 298 -14 824 279 54 56 chr5 5475255 5475572 -197609960 - MLT1I LTR MaLR -89 320 3 1867 200 63 41 chr5 5475775 5476315 -197609217 - L1ME1 LINE L1 -8 6158 5607 2277 79 0 33 chr5 5476655 5476958 -197608574 - AluSp SINE Alu -20 293 1 40 21 0 0 chr5 5477243 5477290 -197608242 + AT_rich Low_complexity Low_complexity 1 47 0 1930 140 0 0 chr5 5477966 5478244 -197607288 + AluSg SINE Alu 25 302 -8 1864 164 60 0 chr5 5478395 5478713 -197606819 - MER1B DNA MER1_type 0 337 1 282 377 31 13 chr5 5479493 5479652 -197605880 + MIR3 SINE MIR 42 203 -5 346 333 63 0 chr5 5480057 5480168 -197605364 + L2 LINE L2 3153 3270 -2 2002 126 29 0 chr5 5480262 5480594 -197604938 + AluSx SINE Alu 1 340 0 546 268 83 20 chr5 5483899 5484153 -197601379 + L1MC4 LINE L1 6792 7061 -981 272 255 54 82 chr5 5484623 5485011 -197600521 + L1MC5 LINE L1 7313 7689 -272 375 237 38 23 chr5 5485224 5485355 -197600177 - Charlie7 DNA MER1_type -3 2609 2477 292 310 139 12 chr5 5487451 5487756 -197597776 - L1MC4a LINE L1 -328 5793 5576 2495 183 33 9 chr5 5487803 5488345 -197597187 - MER90 LTR ERV1 -18 596 1 349 350 33 22 chr5 5488355 5488535 -197596997 - L1MC4a LINE L1 -458 7350 7169 1096 243 83 98 chr5 5488544 5489125 -197596407 + MLT1G LTR MaLR 16 587 -3 422 262 6 90 chr5 5489127 5489361 -197596171 - L1MC4 LINE L1 -735 7226 7040 1291 135 18 135 chr5 5489361 5489760 -197595772 - Tigger5 DNA MER2_type -1 2322 11 1927 149 0 7 chr5 5490492 5490793 -197594739 - AluJb SINE Alu -13 299 1 27 0 0 0 chr5 5491115 5491142 -197594390 + AT_rich Low_complexity Low_complexity 1 27 0 1398 171 114 7 chr5 5491144 5491424 -197594108 - AluJo SINE Alu -2 310 1 317 221 143 0 chr5 5491719 5491796 -197593736 + MER2 DNA MER2_type 1 88 -257 275 244 64 13 chr5 5492019 5492097 -197593435 + MER3 DNA MER1_type 1 82 -127 754 182 0 23 chr5 5492867 5492999 -197592533 - FLAM_C SINE Alu -14 129 1 646 180 0 0 chr5 5494226 5494326 -197591206 + FRAM SINE Alu 45 144 -32 917 200 15 15 chr5 5494794 5494999 -197590533 + MER3 DNA MER1_type 1 205 -4 2161 130 37 6 chr5 5494999 5495352 -197590180 + THE1B LTR MaLR 1 364 0 1715 171 10 10 chr5 5496019 5496311 -197589221 + AluJo SINE Alu 1 292 -20 209 311 134 34 chr5 5496566 5496685 -197588847 + L2 LINE L2 3182 3312 -1 * 225 229 115 21 chr5 5496683 5496779 -197588753 - MIR SINE MIR -68 194 90 309 254 83 55 chr5 5496927 5497108 -197588424 + MIR SINE MIR 71 256 -6 645 257 59 10 chr5 5498811 5499013 -197586519 + L2 LINE L2 1765 1976 -1338 1318 277 76 9 chr5 5499021 5499610 -197585922 + L2 LINE L2 2471 3109 -204 856 154 0 0 chr5 5499768 5499891 -197585641 + FLAM_C SINE Alu 1 123 -20 21 0 0 0 chr5 5499891 5499912 -197585620 + AT_rich Low_complexity Low_complexity 1 21 0 1924 173 0 0 chr5 5500050 5500350 -197585182 + AluJb SINE Alu 1 300 -12 2474 67 0 3 chr5 5501149 5501446 -197584086 + AluY SINE Alu 2 297 -14 940 95 0 3 chr5 5502766 5502988 -197582544 + AluSg SINE Alu 1 298 -12 2110 134 3 0 chr5 5503049 5503348 -197582184 + AluSx SINE Alu 1 300 -12 332 301 99 33 chr5 5503632 5503845 -197581687 + L1ME3 LINE L1 942 1168 -4951 308 315 116 8 chr5 5503979 5504246 -197581286 + HAL1 LINE L1 1463 1758 -749 649 239 155 73 chr5 5504486 5504976 -197580556 + L1ME3 LINE L1 4803 5332 -797 397 309 0 0 chr5 5505001 5505111 -197580421 - MER8 DNA MER2_type -127 112 3 2173 239 94 13 chr5 5505113 5505815 -197579717 + L1ME3 LINE L1 5352 6110 -35 23 33 0 0 chr5 5507162 5507192 -197578340 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5507336 5507357 -197578175 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 5507630 5507651 -197577881 + AT_rich Low_complexity Low_complexity 1 21 0 2403 97 0 0 chr5 5507794 5508103 -197577429 - AluSx SINE Alu -3 309 1 1768 175 34 3 chr5 5508170 5508462 -197577070 - AluSx SINE Alu -11 301 1 1116 216 163 25 chr5 5508951 5509349 -197576183 - MLT1H LTR MaLR 0 549 97 2176 109 7 3 chr5 5509908 5510202 -197575330 - AluSx SINE Alu -17 295 1 1820 174 3 3 chr5 5511626 5511931 -197573601 - AluJo SINE Alu -7 305 1 270 0 0 0 chr5 5511935 5511965 -197573567 + (T)n Simple_repeat Simple_repeat 1 30 0 210 224 0 0 chr5 5512138 5512187 -197573345 + GA-rich Low_complexity Low_complexity 3 51 0 2357 54 7 0 chr5 5512460 5512755 -197572777 - AluY SINE Alu -14 297 1 1955 108 0 0 chr5 5513019 5513269 -197572263 + AluSx SINE Alu 49 298 -14 232 295 214 63 chr5 5513381 5513564 -197571968 - L2 LINE L2 -17 3296 3142 1646 165 7 65 chr5 5513564 5513873 -197571659 - AluJb SINE Alu -21 291 1 232 295 214 63 chr5 5513873 5514021 -197571511 - L2 LINE L2 -171 3142 2915 * 261 303 290 24 chr5 5514017 5514314 -197571218 + L2 LINE L2 2569 2944 -370 27 0 0 0 chr5 5514517 5514544 -197570988 + AT_rich Low_complexity Low_complexity 1 27 0 2481 67 0 0 chr5 5515298 5515597 -197569935 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 5515760 5515797 -197569735 + AT_rich Low_complexity Low_complexity 1 37 0 470 261 154 0 chr5 5516122 5516310 -197569222 - MLT1L LTR MaLR -8 607 391 310 252 55 88 chr5 5516580 5516818 -197568714 - L2 LINE L2 0 3313 3084 316 311 151 50 chr5 5520868 5520954 -197564578 + L1MC/D LINE L1 5439 5515 -2293 1721 88 102 56 chr5 5520954 5521239 -197564293 + AluSg SINE Alu 3 300 -10 316 311 151 50 chr5 5521239 5521390 -197564142 + L1MC/D LINE L1 5515 5700 -2108 484 275 178 51 chr5 5521652 5522264 -197563268 - L2 LINE L2 -2 3311 2625 1370 205 115 18 chr5 5522289 5522742 -197562790 - L1M4 LINE L1 -848 5298 4802 26 64 0 0 chr5 5525364 5525411 -197560121 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 5525818 5525842 -197559690 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2176 110 0 25 chr5 5525867 5526185 -197559347 + AluSx SINE Alu 1 310 -2 315 0 0 0 chr5 5526185 5526220 -197559312 + (TA)n Simple_repeat Simple_repeat 2 36 0 24 32 0 0 chr5 5527455 5527486 -197558046 + AT_rich Low_complexity Low_complexity 1 31 0 2089 110 45 0 chr5 5528652 5528942 -197556590 + AluSx SINE Alu 1 303 -9 342 91 0 0 chr5 5530170 5530225 -197555307 + (CA)n Simple_repeat Simple_repeat 1 55 0 2424 88 0 25 chr5 5531240 5531557 -197553975 + AluSc SINE Alu 1 309 0 470 273 123 0 chr5 5531557 5531738 -197553794 + L2 LINE L2 2364 2567 -747 351 299 76 28 chr5 5532030 5532143 -197553389 + MIR3 SINE MIR 25 148 -60 2123 115 0 20 chr5 5532143 5532448 -197553084 + AluSx SINE Alu 1 299 -13 351 299 76 28 chr5 5532448 5532478 -197553054 + MIR3 SINE MIR 148 175 -33 266 358 75 11 chr5 5532737 5532924 -197552608 + MIR SINE MIR 24 222 -40 2262 108 0 13 chr5 5533203 5533518 -197552014 + AluSx SINE Alu 2 312 0 1295 194 24 8 chr5 5533766 5534018 -197551514 - AluJo SINE Alu -18 294 39 208 375 79 29 chr5 5534471 5534887 -197550645 - L2 LINE L2 -558 2756 2320 11366 107 31 42 chr5 5637191 5637504 -197448028 + Tigger1 DNA MER2_type 658 973 -1445 2295 92 24 0 chr5 5637504 5637799 -197447733 - AluSg SINE Alu -8 302 1 11366 107 31 42 chr5 5637799 5639265 -197446267 + Tigger1 DNA MER2_type 973 2418 0 955 189 124 57 chr5 5639632 5639980 -197445552 + MLT1D LTR MaLR 1 442 -63 2333 94 3 3 chr5 5639980 5640288 -197445244 - AluSp SINE Alu -5 308 1 955 189 124 57 chr5 5640288 5640355 -197445177 + MLT1D LTR MaLR 442 503 -2 586 244 142 20 chr5 5640364 5640561 -197444971 - MIR SINE MIR -39 223 3 2487 58 0 26 chr5 5640744 5641057 -197444475 - AluY SINE Alu -6 305 1 28 0 0 0 chr5 5642690 5642718 -197442814 + AT_rich Low_complexity Low_complexity 1 28 0 1049 209 39 9 chr5 5642725 5642955 -197442577 - L1MB3 LINE L1 -7 6176 5940 2373 92 0 0 chr5 5642957 5643251 -197442281 + AluSg SINE Alu 1 294 -16 2379 105 52 47 chr5 5643251 5643613 -197441919 - THE1B LTR MaLR 0 364 1 2124 136 0 0 chr5 5646660 5646955 -197438577 - AluSx SINE Alu -17 295 1 181 346 72 27 chr5 5648095 5648358 -197437174 + L2 LINE L2 2688 2962 -352 228 215 93 37 chr5 5648572 5648679 -197436853 + L2 LINE L2 3201 3313 0 1805 166 3 7 chr5 5648778 5649080 -197436452 - AluJo SINE Alu -11 301 1 230 158 0 0 chr5 5649844 5649882 -197435650 - tRNA-Leu-TTG tRNA tRNA -46 40 3 2932 257 98 22 chr5 5650958 5652069 -197433463 + L1MC4 LINE L1 6771 7966 -76 1117 180 234 0 chr5 5652071 5652310 -197433222 + AluJb SINE Alu 1 295 -17 456 154 13 0 chr5 5652316 5652394 -197433138 + L1MC4 LINE L1 7960 8038 -4 442 196 112 28 chr5 5652713 5652856 -197432676 - MER104 DNA Tc2 0 180 26 920 96 0 8 chr5 5652856 5652981 -197432551 + FLAM_C SINE Alu 1 124 -19 202 225 0 0 chr5 5654099 5654139 -197431393 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 186 345 44 35 chr5 5654139 5654252 -197431280 + MIR SINE MIR 41 154 -108 453 253 153 0 chr5 5654713 5654883 -197430649 - L2 LINE L2 0 3313 3118 1869 128 176 10 chr5 5655233 5655545 -197429987 + THE1B LTR MaLR 1 364 0 12043 77 12 3 chr5 5655545 5657097 -197428435 + THE1B-int LTR MaLR 15 1580 0 2410 92 63 20 chr5 5657097 5657446 -197428086 + THE1B LTR MaLR 1 364 0 354 312 88 12 chr5 5657679 5657849 -197427683 + L3 LINE CR1 626 808 -769 1136 252 74 24 chr5 5658741 5659162 -197426370 + MLT1L LTR MaLR 166 607 -8 249 299 13 0 chr5 5660056 5660133 -197425399 + L3 LINE CR1 1147 1224 -353 626 255 66 14 chr5 5660413 5660625 -197424907 + L3 LINE CR1 1283 1505 -72 221 167 50 0 chr5 5662417 5662477 -197423055 + (TTATA)n Simple_repeat Simple_repeat 5 67 0 2280 110 0 7 chr5 5662478 5662788 -197422744 - AluSx SINE Alu -4 308 1 721 138 0 18 chr5 5662791 5662900 -197422632 - MLT1B LTR MaLR -282 108 2 2392 99 0 0 chr5 5663797 5664109 -197421423 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 5664205 5664227 -197421305 + AT_rich Low_complexity Low_complexity 1 22 0 807 335 109 65 chr5 5665032 5665163 -197420369 - L3 LINE CR1 -76 1501 1377 1787 136 24 21 chr5 5665163 5665450 -197420082 - AluJb SINE Alu -3 309 22 807 335 109 65 chr5 5665450 5666226 -197419306 - L3 LINE CR1 -200 1377 544 1538 147 45 54 chr5 5666226 5666539 -197418993 - AluJb SINE Alu 0 312 3 807 335 109 65 chr5 5666539 5666616 -197418916 - L3 LINE CR1 -1033 544 472 2022 143 0 0 chr5 5667036 5667330 -197418202 - AluSx SINE Alu -18 294 1 2105 214 85 105 chr5 5668224 5668438 -197417094 - L1ME1 LINE L1 -8 6158 5941 480 101 0 0 chr5 5668438 5668507 -197417025 - Alu SINE Alu -1 309 241 2105 214 85 105 chr5 5668507 5669035 -197416497 - L1ME1 LINE L1 -225 5941 5364 2084 138 38 30 chr5 5669035 5669404 -197416128 - THE1C LTR MaLR 0 375 4 1217 213 20 16 chr5 5669452 5669783 -197415749 - L1MC/D LINE L1 -746 5400 5242 2170 102 0 39 chr5 5669783 5670088 -197415444 - AluSx SINE Alu -19 293 1 1217 213 20 16 chr5 5670088 5670134 -197415398 - L1MC/D LINE L1 -904 5242 5198 770 153 0 96 chr5 5670136 5670293 -197415239 - FLAM_C SINE Alu 0 143 2 5331 221 37 50 chr5 5670294 5671239 -197414293 - L1MC/D LINE L1 -937 5209 4296 1483 131 5 5 chr5 5671239 5671453 -197414079 - AluSg/x SINE Alu -13 299 86 5331 221 37 50 chr5 5671453 5672221 -197413311 - L1MC/D LINE L1 -1850 4296 3519 278 248 9 0 chr5 5672383 5672492 -197413040 + GA-rich Low_complexity Low_complexity 1 110 0 891 313 50 37 chr5 5672544 5673200 -197412332 + HAL1b LINE L1 145 809 -539 2140 83 79 0 chr5 5673622 5673912 -197411620 - AluSp SINE Alu 0 313 1 1300 208 21 4 chr5 5674980 5675251 -197410281 + AluJo SINE Alu 39 313 0 1099 217 156 44 chr5 5675555 5675793 -197409739 - L1 LINE L1 -1593 4553 4343 1582 194 14 17 chr5 5675793 5676087 -197409445 - AluJb SINE Alu -14 298 6 1099 217 156 44 chr5 5676087 5676258 -197409274 - L1 LINE L1 -1803 4343 4098 1605 230 25 42 chr5 5676262 5676736 -197408796 - L1 LINE L1 -2155 3991 3526 206 279 0 0 chr5 5677013 5677056 -197408476 - L2 LINE L2 -3 3310 3268 21 0 0 0 chr5 5677409 5677430 -197408102 + AT_rich Low_complexity Low_complexity 1 21 0 234 301 154 0 chr5 5678964 5679087 -197406445 - MIR3 SINE MIR -25 183 42 1052 233 165 16 chr5 5679255 5679869 -197405663 + LTR50 LTR ERVL 1 793 -2 1656 149 76 41 chr5 5681344 5681685 -197403847 - THE1C LTR MaLR -33 342 1 1768 120 19 0 chr5 5681757 5682016 -197403516 - AluSg1 SINE Alu -5 304 41 804 262 151 70 chr5 5682326 5682696 -197402836 + MLT1I LTR MaLR 2 401 -8 2123 126 7 0 chr5 5683047 5683349 -197402183 - AluSx SINE Alu -2 310 7 2301 198 35 71 chr5 5683564 5684139 -197401393 - MLT2B3 LTR ERVL 0 554 1 1728 159 77 30 chr5 5684736 5685100 -197400432 + MLT1B LTR MaLR 8 388 -2 1360 263 43 17 chr5 5685288 5685638 -197399894 + MLT1I LTR MaLR 48 406 -3 360 0 0 0 chr5 5686368 5686408 -197399124 + (TG)n Simple_repeat Simple_repeat 1 40 0 1795 169 36 109 chr5 5686915 5687327 -197398205 - MLT1C LTR MaLR 0 467 96 1985 121 33 16 chr5 5687327 5687633 -197397899 - AluSx SINE Alu 0 312 2 1795 169 36 109 chr5 5687633 5687717 -197397815 - MLT1C LTR MaLR -371 96 7 241 203 0 87 chr5 5687994 5688063 -197397469 - MLT1K LTR MaLR -34 554 492 23 54 0 0 chr5 5688252 5688289 -197397243 + AT_rich Low_complexity Low_complexity 1 37 0 443 328 63 25 chr5 5689218 5689427 -197396105 - L1MC4a LINE L1 -1882 5926 5702 2030 116 34 3 chr5 5689427 5689719 -197395813 - AluSx SINE Alu -11 301 1 443 328 63 25 chr5 5689719 5689793 -197395739 - L1MC4a LINE L1 -2106 5702 5632 1217 75 6 13 chr5 5689962 5690121 -197395411 - AluY SINE Alu -153 158 1 21 0 0 56 chr5 5690620 5690638 -197394894 + AT_rich Low_complexity Low_complexity 1 18 -16 1486 41 0 0 chr5 5690638 5690809 -197394723 - AluY SINE Alu -18 293 123 21 0 0 56 chr5 5690809 5690826 -197394706 + AT_rich Low_complexity Low_complexity 18 34 0 1494 178 69 7 chr5 5691219 5691495 -197394037 - AluJo SINE Alu -19 293 1 417 310 158 10 chr5 5691855 5692058 -197393474 - MIR SINE MIR -1 261 29 1897 136 51 0 chr5 5692066 5692361 -197393171 - AluSg SINE Alu 0 310 1 845 194 58 51 chr5 5692383 5692829 -197392703 + MER39 LTR ERV1 1 550 -157 2636 119 8 99 chr5 5692829 5693326 -197392206 - LTR12 LTR ERV1 -236 478 27 707 185 57 13 chr5 5693351 5693519 -197392013 + MER39 LTR ERV1 364 707 0 5769 136 23 24 chr5 5693909 5695054 -197390478 - L1PA16 LINE L1 -9 6157 5013 1975 166 0 0 chr5 5695054 5695355 -197390177 - AluJb SINE Alu -11 301 1 5769 136 23 24 chr5 5695355 5695371 -197390161 - L1PA16 LINE L1 -1153 5013 4998 2051 127 3 0 chr5 5695371 5695680 -197389852 - AluSx SINE Alu 0 310 1 5769 136 23 24 chr5 5695680 5695808 -197389724 - L1PA16 LINE L1 -1168 4998 4873 1703 120 12 0 chr5 5695906 5696148 -197389384 + AluSq SINE Alu 10 254 -59 2480 78 10 0 chr5 5696248 5696555 -197388977 + AluSq SINE Alu 4 313 0 394 306 91 30 chr5 5696756 5697021 -197388511 - L1MDa LINE L1 -3925 2615 2335 22677 82 13 4 chr5 5697035 5700979 -197384553 - L1PA7 LINE L1 -6 6148 2170 385 178 68 0 chr5 5702080 5702153 -197383379 - MIR SINE MIR -106 156 79 30 45 0 0 chr5 5702882 5702926 -197382606 + AT_rich Low_complexity Low_complexity 1 44 0 981 184 6 0 chr5 5703611 5703774 -197381758 + MLT1A1 LTR MaLR 202 365 0 754 195 83 6 chr5 5705069 5705238 -197380294 - LTR40a LTR ERVL -314 205 24 252 276 233 0 chr5 5705258 5705374 -197380158 + HAL1 LINE L1 1504 1646 -861 1961 114 60 4 chr5 5705416 5705697 -197379835 + AluSx SINE Alu 1 297 -15 866 290 136 45 chr5 5707133 5707867 -197377665 + HAL1 LINE L1 4 804 -1703 2388 86 0 0 chr5 5708136 5708427 -197377105 + AluSg SINE Alu 2 292 -18 1161 122 87 0 chr5 5708547 5708743 -197376789 + L1MA1 LINE L1 6090 6302 0 317 254 66 8 chr5 5708911 5709033 -197376499 + HAL1 LINE L1 2030 2158 -349 611 200 38 79 chr5 5709138 5709378 -197376154 + HAL1 LINE L1 2191 2420 -87 8600 120 17 71 chr5 5709595 5711933 -197373599 + L1P3 LINE L1 12 2097 -4049 1446 180 170 41 chr5 5712835 5713247 -197372285 + MLT1C LTR MaLR 1 465 -2 2061 134 33 25 chr5 5713254 5713613 -197371919 - MLT1A1 LTR MaLR 0 365 4 216 206 14 68 chr5 5715352 5715425 -197370107 - L2 LINE L2 -2 3311 3243 564 289 97 30 chr5 5715444 5715742 -197369790 - MLT1J1 LTR MaLR -4 442 125 294 253 51 0 chr5 5716150 5716229 -197369303 - MIR SINE MIR -75 187 105 3607 65 0 7 chr5 5716248 5716712 -197368820 + L1PA13 LINE L1 5703 6163 0 1535 205 10 7 chr5 5716722 5717015 -197368517 + AluJb SINE Alu 4 297 -15 1031 184 0 17 chr5 5717187 5717366 -197368166 - AluJo SINE Alu -132 180 5 2416 93 0 0 chr5 5717382 5717682 -197367850 - AluSc SINE Alu -7 302 3 238 230 92 11 chr5 5717699 5717786 -197367746 - MLT1J1 LTR MaLR -8 438 345 229 220 20 0 chr5 5719902 5719952 -197365580 + L2 LINE L2 3222 3272 0 4275 122 9 8 chr5 5720113 5720747 -197364785 - MER41B LTR ERV1 0 635 1 1717 71 4 0 chr5 5721245 5721471 -197364061 - L1PA8 LINE L1 -2 6170 5944 458 274 87 46 chr5 5721666 5722220 -197363312 + MER20B DNA MER1_type 16 702 -81 1915 196 48 5 chr5 5722224 5722602 -197362930 + MSTD LTR MaLR 1 394 -2 6908 228 47 38 chr5 5722606 5724325 -197361207 + MSTD-int LTR MaLR 2 1735 0 670 111 46 9 chr5 5724325 5724433 -197361099 + MSTD LTR MaLR 1 112 -284 340 167 97 0 chr5 5724430 5724502 -197361030 + MSTD LTR MaLR 314 392 -4 * 3736 156 21 25 chr5 5724539 5725219 -197360313 - L1MB2 LINE L1 -43 6128 5452 450 146 29 19 chr5 5725224 5725327 -197360205 + MER20B DNA MER1_type 680 783 0 25 31 0 0 chr5 5726924 5726956 -197358576 + AT_rich Low_complexity Low_complexity 1 32 0 390 221 21 0 chr5 5727147 5727242 -197358290 - MIR SINE MIR -109 153 57 2316 86 0 32 chr5 5727325 5727638 -197357894 - AluSc SINE Alu -3 306 4 251 338 53 7 chr5 5727862 5728013 -197357519 + MIR SINE MIR 94 251 -11 1430 176 17 76 chr5 5728371 5728695 -197356837 + AluJo SINE Alu 2 307 0 23 33 0 0 chr5 5729176 5729206 -197356326 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5729441 5729462 -197356070 + AT_rich Low_complexity Low_complexity 1 21 0 1726 168 20 23 chr5 5729462 5729766 -197355766 - AluJb SINE Alu -9 303 1 1262 102 0 5 chr5 5732813 5732999 -197352533 + L1PA13 LINE L1 5979 6163 0 26 50 0 0 chr5 5733226 5733266 -197352266 + AT_rich Low_complexity Low_complexity 1 40 0 1629 157 42 17 chr5 5733268 5733555 -197351977 + AluJo SINE Alu 1 294 -18 609 172 25 0 chr5 5733581 5733703 -197351829 + L1MC1 LINE L1 6208 6332 -1 513 158 53 75 chr5 5734580 5734713 -197350819 + MER91B DNA MER1_type 1 130 -60 196 125 75 0 chr5 5734914 5734954 -197350578 - L2 LINE L2 -2 3270 3228 451 225 230 16 chr5 5735058 5735249 -197350283 + MLT1J2 LTR MaLR 75 306 -144 430 323 65 40 chr5 5735421 5735622 -197349910 + MIR SINE MIR 47 252 -10 326 313 148 28 chr5 5735663 5735839 -197349693 + MIR SINE MIR 49 245 -17 1555 171 123 50 chr5 5735882 5736187 -197349345 - MSTC LTR MaLR -1 427 85 692 46 0 0 chr5 5736187 5736274 -197349258 - L1PA4 LINE L1 -3 6152 6066 1555 171 123 50 chr5 5736274 5736366 -197349166 - MSTC LTR MaLR -343 85 1 1331 218 85 37 chr5 5736366 5736773 -197348759 + MLT1C LTR MaLR 30 464 -3 239 138 0 138 chr5 5736959 5737017 -197348515 - MER58 DNA MER1_type -84 257 208 559 226 44 0 chr5 5737088 5737225 -197348307 + MER5C DNA MER1_type 17 159 -165 1345 113 28 0 chr5 5737248 5737461 -197348071 - L1MA4 LINE L1 -18 6282 6064 256 23 0 47 chr5 5737508 5737551 -197347981 + (TA)n Simple_repeat Simple_repeat 2 42 0 183 269 106 67 chr5 5738208 5738312 -197347220 - MIR3 SINE MIR -10 198 91 438 243 99 7 chr5 5738964 5739017 -197346515 + MER5B DNA MER1_type 6 53 -125 627 171 97 17 chr5 5739017 5739192 -197346340 + MER5A DNA MER1_type 1 189 0 438 243 99 7 chr5 5739192 5739290 -197346242 + MER5B DNA MER1_type 53 171 -7 37 0 0 0 chr5 5739553 5739590 -197345942 + AT_rich Low_complexity Low_complexity 1 37 0 1639 104 36 0 chr5 5739590 5739810 -197345722 - AluSx SINE Alu -84 228 1 4576 109 14 33 chr5 5740000 5740167 -197345365 - LTR8 LTR ERV1 0 691 522 2377 82 3 10 chr5 5740167 5740473 -197345059 - AluSp SINE Alu -9 304 1 4576 109 14 33 chr5 5740473 5741009 -197344523 - LTR8 LTR ERV1 -169 522 1 594 183 26 9 chr5 5741010 5741125 -197344407 - LTR8A LTR ERV1 -610 117 1 2274 105 0 3 chr5 5741322 5741635 -197343897 + AluSx SINE Alu 1 312 0 223 172 266 0 chr5 5742183 5742247 -197343285 + L2 LINE L2 3231 3311 -2 186 253 22 88 chr5 5742748 5742839 -197342693 - MER5B DNA MER1_type -69 109 25 593 236 21 64 chr5 5743134 5743367 -197342165 + L1MC5 LINE L1 7061 7283 -678 485 188 75 30 chr5 5743462 5743595 -197341937 + L1MC5 LINE L1 7299 7437 -524 362 288 196 7 chr5 5743604 5743757 -197341775 + MER5A DNA MER1_type 8 189 0 379 230 152 22 chr5 5743775 5744145 -197341387 + L1MC5 LINE L1 7452 7901 -60 259 101 13 51 chr5 5744424 5744503 -197341029 + (TA)n Simple_repeat Simple_repeat 2 77 0 2796 86 23 13 chr5 5744503 5744900 -197340632 - MLT2A1 LTR ERVL -43 401 1 2778 125 34 26 chr5 5744900 5745012 -197340520 - L1MA4A LINE L1 -255 6048 5562 1904 163 35 35 chr5 5745012 5745387 -197340145 - THE1C LTR MaLR 0 375 1 1967 189 15 94 chr5 5745387 5746257 -197339275 - L1PA2 LINE L1 -226 5929 5186 393 205 158 0 chr5 5746257 5746384 -197339148 + MER5C DNA MER1_type 174 320 -4 212 200 0 0 chr5 5746913 5746953 -197338579 + L2 LINE L2 3264 3303 -10 1412 202 82 12 chr5 5747292 5747633 -197337899 - MLT1A1 LTR MaLR 0 365 1 548 29 14 0 chr5 5747745 5747815 -197337717 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 744 141 0 16 chr5 5747815 5747936 -197337596 - FLAM_C SINE Alu -23 120 2 2594 51 0 10 chr5 5749279 5749592 -197335940 - AluY SINE Alu -1 310 1 235 302 52 17 chr5 5750199 5750371 -197335161 + L1MC4a LINE L1 2305 2482 -3664 1532 234 122 22 chr5 5750433 5750885 -197334647 + MLT1D LTR MaLR 1 497 -8 1367 320 52 24 chr5 5750975 5752253 -197333279 + L1MC4a LINE L1 2676 3988 -2158 21 36 0 0 chr5 5752265 5752293 -197333239 + AT_rich Low_complexity Low_complexity 1 28 0 323 289 54 43 chr5 5752451 5752728 -197332804 + L1MC4a LINE L1 4161 4440 -1706 2522 62 0 28 chr5 5752802 5753122 -197332410 - AluY SINE Alu 0 311 1 536 260 75 78 chr5 5753128 5753513 -197332019 + MLT1J LTR MaLR 36 419 -92 5256 156 14 6 chr5 5753650 5754547 -197330985 + L1MC1 LINE L1 5429 6333 0 395 322 26 26 chr5 5754565 5754795 -197330737 + L1MC4a LINE L1 4456 4685 -1461 2920 123 9 60 chr5 5755392 5755927 -197329605 - L1PB1 LINE L1 -10 6141 5634 2172 101 6 19 chr5 5755952 5756268 -197329264 - AluSp SINE Alu -1 312 1 280 224 0 0 chr5 5756269 5756327 -197329205 + LTR16B LTR ERVL 407 464 0 243 254 99 28 chr5 5756331 5756473 -197329059 + L1MC4a LINE L1 4903 5054 -1092 1163 219 120 69 chr5 5756506 5756972 -197328560 - MLT1D LTR MaLR -4 501 12 598 258 45 25 chr5 5756994 5757358 -197328174 + L1MC4a LINE L1 5107 5481 -743 2366 99 0 6 chr5 5757434 5757746 -197327786 + AluSg SINE Alu 1 310 0 293 319 89 27 chr5 5757760 5758017 -197327515 + L1MC4a LINE L1 5658 5930 -1878 1850 155 58 0 chr5 5758102 5758393 -197327139 - AluJb SINE Alu -4 308 1 3379 51 10 0 chr5 5758403 5758818 -197326714 - L1PA5 LINE L1 -2 6152 5734 668 110 66 37 chr5 5758949 5759085 -197326447 - L1MA4A LINE L1 0 6303 6164 1496 216 35 37 chr5 5759535 5759910 -197325622 - MLT1A2 LTR MaLR 0 374 1 1154 237 106 32 chr5 5761175 5761610 -197323922 + MLT1C LTR MaLR 1 467 0 693 175 9 0 chr5 5761806 5761920 -197323612 - FLAM_C SINE Alu -17 116 2 395 191 0 0 chr5 5761922 5761990 -197323542 - AluJ/FLAM SINE Alu -233 69 2 410 159 0 0 chr5 5761992 5762061 -197323471 - AluJ/FLAM SINE Alu -243 69 1 195 280 262 0 chr5 5762065 5762172 -197323360 + L2 LINE L2 2926 3060 -253 1932 181 38 53 chr5 5762374 5762671 -197322861 - MLT1C LTR MaLR 0 467 178 2225 100 3 0 chr5 5762671 5762962 -197322570 - AluSx SINE Alu -20 292 1 1932 181 38 53 chr5 5762962 5763133 -197322399 - MLT1C LTR MaLR -289 178 6 2216 113 0 10 chr5 5764725 5765034 -197320498 - AluSx SINE Alu -6 306 1 1697 204 264 13 chr5 5765118 5765819 -197319713 - Charlie7 DNA MER1_type -231 2381 1505 2132 113 40 64 chr5 5765840 5766049 -197319483 - THE1B LTR MaLR 0 364 166 2120 99 3 35 chr5 5766049 5766362 -197319170 + AluSq SINE Alu 1 303 -10 2132 113 40 64 chr5 5766362 5766525 -197319007 - THE1B LTR MaLR -198 166 1 192 209 110 0 chr5 5766754 5766845 -197318687 + MIR SINE MIR 82 146 -62 2360 157 49 2 chr5 5767948 5768357 -197317175 - MSTA LTR MaLR 0 428 1 1570 256 132 25 chr5 5768486 5769010 -197316522 + MLT1G1 LTR MaLR 4 583 -12 2177 94 4 0 chr5 5769018 5769294 -197316238 + AluSp SINE Alu 1 277 -36 222 37 0 0 chr5 5769300 5769327 -197316205 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1067 257 107 17 chr5 5770097 5770443 -197315089 + MLT1E2 LTR MaLR 1 377 -249 194 354 0 23 chr5 5770461 5770591 -197314941 + MIR SINE MIR 86 212 -50 208 206 0 0 chr5 5771215 5771249 -197314283 + polypyrimidine Low_complexity Low_complexity 3 36 0 504 329 36 32 chr5 5771270 5771519 -197314013 - HAL1 LINE L1 -9 2498 2249 181 81 27 27 chr5 5771651 5771688 -197313844 + (TC)n Simple_repeat Simple_repeat 2 38 0 359 280 19 9 chr5 5772056 5772163 -197313369 - HAL1 LINE L1 -741 1766 1659 355 130 29 14 chr5 5772172 5772241 -197313291 - MLT1E2 LTR MaLR 0 624 555 1546 113 38 25 chr5 5772266 5772506 -197313026 - L1PB4 LINE L1 -2 6154 5912 455 257 11 73 chr5 5772535 5772714 -197312818 - MLT1E2 LTR MaLR -226 400 233 386 205 77 51 chr5 5772754 5772871 -197312661 - MLT1E2 LTR MaLR -506 120 1 1815 149 0 58 chr5 5772877 5773186 -197312346 - AluSx SINE Alu -21 291 1 279 305 90 6 chr5 5773405 5773572 -197311960 - LTR16C LTR ERVL -32 459 279 470 267 107 40 chr5 5774114 5774328 -197311204 - LTR33 LTR ERVL -306 215 1 331 280 106 21 chr5 5774618 5774807 -197310725 - HERVL LTR ERVL -452 5312 5108 1819 158 59 24 chr5 5774960 5775301 -197310231 + MLT1A1 LTR MaLR 1 353 -12 282 375 15 0 chr5 5775551 5775687 -197309845 - HERVL LTR ERVL -2627 3027 2890 2128 269 60 49 chr5 5775780 5776699 -197308833 + L1MC4 LINE L1 7113 8041 -1 1372 196 28 89 chr5 5777061 5777454 -197308078 - MLT1B LTR MaLR -2 388 20 1162 211 61 94 chr5 5778949 5779427 -197306105 + MLT1C LTR MaLR 6 467 0 3004 191 50 5 chr5 5780763 5781214 -197304318 - L1MB5 LINE L1 -21 6153 5667 273 119 0 0 chr5 5781214 5781256 -197304276 + (TA)n Simple_repeat Simple_repeat 2 43 0 3004 191 50 5 chr5 5781256 5781405 -197304127 - L1MB5 LINE L1 -507 5667 5526 247 286 0 0 chr5 5782691 5782761 -197302771 + L2 LINE L2 3203 3272 0 189 269 0 19 chr5 5782942 5782994 -197302538 + MIR3 SINE MIR 8 58 -150 432 100 43 164 chr5 5783562 5783629 -197301903 + HAL1 LINE L1 1530 1573 -934 2343 95 0 7 chr5 5783629 5783934 -197301598 + AluSg SINE Alu 1 303 -7 432 100 43 164 chr5 5783934 5784006 -197301526 + HAL1 LINE L1 1573 1652 -855 358 311 33 7 chr5 5784455 5784606 -197300926 - L1M4 LINE L1 -2964 3182 3028 2406 122 55 18 chr5 5784896 5785330 -197300202 - LTR7 LTR ERV1 0 450 1 195 146 0 0 chr5 5785403 5785444 -197300088 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1495 322 0 63 chr5 5786072 5786403 -197299129 + AluSx SINE Alu 1 312 0 1559 173 8 4 chr5 5786405 5786660 -197298872 + AluJb SINE Alu 35 290 -22 541 269 102 19 chr5 5786876 5787199 -197298333 - HAL1b LINE L1 -478 870 521 2403 92 0 0 chr5 5787320 5787624 -197297908 + AluY SINE Alu 1 304 -7 311 290 51 54 chr5 5787648 5787924 -197297608 - HAL1b LINE L1 -1036 312 38 180 0 0 0 chr5 5788905 5788925 -197296607 + (TA)n Simple_repeat Simple_repeat 2 21 0 306 298 102 15 chr5 5789438 5789643 -197295889 - L1M4 LINE L1 -2236 3910 3688 373 278 81 45 chr5 5789867 5790090 -197295442 + MIR SINE MIR 29 259 -3 19556 89 14 1 chr5 5790124 5793623 -197291909 - L1PA7 LINE L1 -5 6464 2921 4495 114 48 0 chr5 5793631 5794278 -197291254 - L1PA7 LINE L1 -5774 687 10 677 295 82 63 chr5 5794320 5794808 -197290724 - L1M4 LINE L1 -2685 3461 2954 824 224 50 36 chr5 5794808 5795027 -197290505 + MER58A DNA MER1_type 2 223 -1 677 295 82 63 chr5 5795027 5795247 -197290285 - L1M4 LINE L1 -3192 2954 2740 830 254 89 44 chr5 5795558 5795896 -197289636 + MLT1H LTR MaLR 190 542 -7 897 256 107 8 chr5 5796082 5796344 -197289188 + MLT1G1 LTR MaLR 1 288 -307 550 329 57 57 chr5 5796356 5796778 -197288754 + L2 LINE L2 2892 3313 0 415 256 64 60 chr5 5796866 5797100 -197288432 - HAL1b LINE L1 -778 570 336 1692 201 13 87 chr5 5797140 5797612 -197287920 - MLT1D LTR MaLR -8 497 61 366 250 62 8 chr5 5798119 5798188 -197287344 - HAL1 LINE L1 -84 2423 2359 3196 188 18 38 chr5 5798188 5798463 -197287069 + MLT1E1 LTR MaLR 3 282 -372 2275 117 0 0 chr5 5798463 5798761 -197286771 + AluSx SINE Alu 6 303 -9 3196 188 18 38 chr5 5798761 5799150 -197286382 + MLT1E1 LTR MaLR 282 654 0 366 250 62 8 chr5 5799150 5799208 -197286324 - HAL1 LINE L1 -148 2359 2289 604 296 139 18 chr5 5799792 5800066 -197285466 - MLT1I LTR MaLR -28 381 75 325 349 95 11 chr5 5800192 5800456 -197285076 + L1MC/D LINE L1 5295 5580 -2228 297 258 43 0 chr5 5800616 5800709 -197284823 + L2 LINE L2 3169 3265 -7 317 158 11 32 chr5 5801476 5801571 -197283961 + (TA)n Simple_repeat Simple_repeat 1 93 0 208 189 38 38 chr5 5801578 5801631 -197283901 + MER5A DNA MER1_type 137 189 0 247 258 0 21 chr5 5803085 5803178 -197282354 - L1MC4 LINE L1 -1338 6704 6614 687 233 223 40 chr5 5803323 5803696 -197281836 - MLT1H LTR MaLR -107 442 2 291 293 40 0 chr5 5803696 5803795 -197281737 - MIR SINE MIR -63 145 43 2327 147 24 31 chr5 5805630 5806045 -197279487 + MLT2D LTR ERVL 3 414 0 486 286 49 35 chr5 5806054 5806257 -197279275 - MIR SINE MIR -41 221 16 245 252 86 28 chr5 5807089 5807226 -197278306 + LTR33A LTR ERVL 403 520 -3 446 156 0 92 chr5 5807512 5807621 -197277911 - L1PA11 LINE L1 0 6174 6076 2319 16 0 0 chr5 5807626 5807881 -197277651 + L1P1 LINE L1 5469 5723 -432 2032 119 9 35 chr5 5808244 5808563 -197276969 - AluJo SINE Alu -1 311 1 269 300 46 31 chr5 5808567 5808697 -197276835 - MIR SINE MIR -60 148 17 31 0 0 0 chr5 5808933 5808964 -197276568 + AT_rich Low_complexity Low_complexity 1 31 0 670 240 91 13 chr5 5809710 5809864 -197275668 + MER20 DNA MER1_type 53 218 -1 297 333 57 12 chr5 5811053 5811299 -197274233 - L2 LINE L2 -1244 2070 1814 240 35 0 0 chr5 5812297 5812326 -197273206 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 317 239 188 0 chr5 5813356 5813473 -197272059 + MLT1J2 LTR MaLR 67 205 -245 1843 187 52 9 chr5 5815066 5815414 -197270118 + MLT1A1 LTR MaLR 1 363 -2 404 289 36 36 chr5 5815777 5815943 -197269589 - MIR SINE MIR -32 230 65 647 258 45 10 chr5 5816430 5816628 -197268904 + MIR SINE MIR 1 205 -57 2902 138 39 55 chr5 5818065 5818124 -197267408 + L1MA9 LINE L1 5726 5784 -528 2125 123 0 0 chr5 5818124 5818417 -197267115 + AluSx SINE Alu 1 293 -19 2902 138 39 55 chr5 5818417 5818797 -197266735 + L1MA9 LINE L1 5784 6155 -157 180 97 0 0 chr5 5818797 5818828 -197266704 + (CA)n Simple_repeat Simple_repeat 1 31 0 2902 138 39 55 chr5 5818828 5818983 -197266549 + L1MA9 LINE L1 6155 6311 -1 2453 47 14 10 chr5 5819429 5819725 -197265807 - AluY SINE Alu -14 297 1 256 279 93 0 chr5 5820086 5820172 -197265360 - MER5A DNA MER1_type -29 160 67 184 111 0 0 chr5 5820253 5820280 -197265252 - MER5A DNA MER1_type -161 28 2 5492 107 102 78 chr5 5820683 5822233 -197263299 - pTR5 LTR ERV1 0 2438 743 2203 191 42 2 chr5 5822320 5822744 -197262788 - MLT1C LTR MaLR -26 441 1 960 135 0 0 chr5 5823997 5824130 -197261402 - AluJb SINE Alu -179 133 1 2807 176 20 20 chr5 5824450 5825008 -197260524 - MER89 LTR ERV1 -1 558 1 2335 95 0 0 chr5 5825147 5825443 -197260089 - AluSg SINE Alu -14 296 1 1312 155 28 53 chr5 5825507 5825959 -197259573 - THE1C LTR MaLR 0 375 2 246 58 0 58 chr5 5825959 5826011 -197259521 + (TA)n Simple_repeat Simple_repeat 2 50 0 2459 60 0 3 chr5 5828342 5828640 -197256892 + AluY SINE Alu 1 297 -14 237 237 0 17 chr5 5828910 5828969 -197256563 - L1ME LINE L1 -521 5583 5526 333 251 64 29 chr5 5829004 5829163 -197256369 - L1ME LINE L1 -682 5422 5296 325 280 140 51 chr5 5829668 5830061 -197255471 - L2 LINE L2 -44 3269 2842 482 274 19 42 chr5 5830099 5830143 -197255389 - L2 LINE L2 -788 2526 2482 2045 202 44 13 chr5 5830143 5830594 -197254938 - MLT1C LTR MaLR -2 465 1 482 274 19 42 chr5 5830594 5830764 -197254768 - L2 LINE L2 -832 2482 2317 454 226 70 148 chr5 5832064 5832558 -197252974 - L1ME LINE L1 -3289 2840 2425 1997 149 0 0 chr5 5832558 5832874 -197252658 - AluSx SINE Alu 0 316 1 454 226 70 148 chr5 5832874 5833147 -197252385 - L1ME LINE L1 -3704 2425 2132 1669 147 110 40 chr5 5833407 5833753 -197251779 + THE1C LTR MaLR 1 370 -5 228 241 161 0 chr5 5833758 5833845 -197251687 - L1ME LINE L1 -6015 104 4 22 35 0 0 chr5 5833854 5833883 -197251649 + AT_rich Low_complexity Low_complexity 1 29 0 209 138 17 52 chr5 5834016 5834074 -197251458 + (TA)n Simple_repeat Simple_repeat 2 57 0 2822 129 26 5 chr5 5834106 5834525 -197251007 + MSTA LTR MaLR 1 428 0 4831 144 2 188 chr5 5834527 5834995 -197250537 + MSTA-int LTR MaLR 3 282 -1298 1281 126 0 22 chr5 5834995 5835177 -197250355 + AluSx SINE Alu 40 217 -95 4831 144 2 188 chr5 5835177 5835854 -197249678 + MSTA-int LTR MaLR 282 1083 -497 384 89 38 25 chr5 5836274 5836353 -197249179 + T-rich Low_complexity Low_complexity 2 81 0 1851 164 6 25 chr5 5836355 5836672 -197248860 - AluJo SINE Alu -1 311 1 518 236 27 0 chr5 5837938 5838048 -197247484 - MER81 DNA DNA 0 114 2 288 229 72 24 chr5 5838296 5838379 -197247153 + MLT1K LTR MaLR 502 588 0 203 294 0 35 chr5 5838504 5838589 -197246943 - L3 LINE CR1 -22 1555 1474 2663 52 0 0 chr5 5839097 5839402 -197246130 + AluY SINE Alu 1 305 -6 259 302 112 39 chr5 5839485 5839717 -197245815 - MLT1K LTR MaLR 0 588 340 796 203 88 39 chr5 5840080 5840379 -197245153 + MLT1A2 LTR MaLR 1 370 -4 235 219 73 42 chr5 5840589 5840685 -197244847 + MER5A DNA MER1_type 65 163 -26 227 294 52 37 chr5 5840711 5840847 -197244685 + L2 LINE L2 2947 3084 -188 1939 148 20 7 chr5 5840937 5841235 -197244297 - AluJb SINE Alu -9 303 2 355 277 0 0 chr5 5843618 5843683 -197241849 - MER2 DNA MER2_type -1 344 280 873 184 24 68 chr5 5843718 5843925 -197241607 + LTR18B LTR ERVL 1 198 -416 * 1448 113 156 19 chr5 5843921 5844178 -197241354 + LTR18B LTR ERVL 323 614 0 395 56 19 0 chr5 5844179 5844227 -197241305 - MER2 DNA MER2_type -135 210 162 1194 152 3 21 chr5 5844227 5844608 -197240924 - LTR32 LTR ERVL 0 471 6 1019 165 28 6 chr5 5844585 5844761 -197240771 - MER2 DNA MER2_type -165 180 1 * 1436 182 79 65 chr5 5845711 5846327 -197239205 + MLT1D LTR MaLR 1 505 0 2993 158 19 6 chr5 5846912 5847437 -197238095 + L1MB3 LINE L1 5651 6182 -1 274 271 79 50 chr5 5848505 5848645 -197236887 - L2 LINE L2 -26 3246 3103 1376 190 61 98 chr5 5849447 5849650 -197235882 - MLT1C LTR MaLR 0 467 258 1583 157 7 23 chr5 5849650 5849956 -197235576 - L1MA4 LINE L1 -1 6299 5999 1376 190 61 98 chr5 5849956 5850230 -197235302 - MLT1C LTR MaLR -209 258 8 238 319 194 19 chr5 5850249 5850563 -197234969 - L2 LINE L2 -910 2404 2036 275 254 140 12 chr5 5851397 5851561 -197233971 - MLT1I LTR MaLR 0 417 268 410 331 35 18 chr5 5853130 5853299 -197232233 - L2 LINE L2 0 3272 3101 323 305 17 0 chr5 5854397 5854515 -197231017 + MIR3 SINE MIR 82 201 -7 552 315 40 46 chr5 5855307 5855819 -197229713 + MER115 DNA AcHobo 54 665 -28 14212 179 79 16 chr5 5855860 5862932 -197222600 + L1MA1 LINE L1 13 7543 -178 5994 195 38 30 chr5 5862932 5863652 -197221880 - L1 LINE L1 -2695 3633 2920 879 190 0 0 chr5 5863652 5863810 -197221722 - L1PB4 LINE L1 -3 6153 5996 5994 195 38 30 chr5 5863810 5866699 -197218833 - L1 LINE L1 -3408 2920 4 615 220 69 0 chr5 5867131 5867290 -197218242 - MER45A DNA AcHobo -8 170 1 550 287 24 12 chr5 5867293 5867457 -197218075 - MIR SINE MIR -62 200 35 1591 174 18 18 chr5 5868294 5868599 -197216933 - AluJo SINE Alu 0 305 1 1313 201 7 0 chr5 5870074 5870377 -197215155 - L1PA13 LINE L1 -909 5888 5584 * 34901 93 13 10 chr5 5870367 5876483 -197209049 + L1PA6 LINE L1 11 6141 -13 8988 197 32 11 chr5 5876598 5878683 -197206849 - L1PA13 LINE L1 -1178 5619 3491 40203 56 4 0 chr5 5878701 5884833 -197200699 - L1PA5 LINE L1 -1 6153 1 5050 222 32 5 chr5 5884845 5886546 -197198986 - L1PA13 LINE L1 -3303 3494 1748 1194 129 143 34 chr5 5886547 5886683 -197198849 + MSTA LTR MaLR 1 121 -307 186 43 0 0 chr5 5886683 5886706 -197198826 + (TC)n Simple_repeat Simple_repeat 1 23 0 1194 129 143 34 chr5 5886706 5886893 -197198639 + MSTA LTR MaLR 121 428 0 1056 140 4 72 chr5 5886893 5887129 -197198403 - L1PA13 LINE L1 -5036 1751 1532 779 228 34 15 chr5 5887856 5888062 -197197470 + MLT1A1 LTR MaLR 156 365 0 1029 279 68 14 chr5 5888212 5888639 -197196893 - LTR16A LTR ERVL 0 450 1 288 262 0 12 chr5 5888646 5888730 -197196802 + Charlie7 DNA MER1_type 2530 2612 0 21 0 0 0 chr5 5889114 5889135 -197196397 + AT_rich Low_complexity Low_complexity 1 21 0 584 167 0 0 chr5 5889609 5889723 -197195809 - L1MA8 LINE L1 -22 6269 6156 37926 73 8 4 chr5 5890353 5896476 -197189056 - L1PA5 LINE L1 -2 6152 5 1656 191 46 114 chr5 5897223 5898028 -197187504 + LTR8A LTR ERV1 1 727 0 323 241 98 45 chr5 5898720 5898853 -197186679 - MIR SINE MIR -2 260 121 692 271 44 6 chr5 5898999 5899221 -197186311 + MIR SINE MIR 30 255 -7 1520 159 6 28 chr5 5899226 5899552 -197185980 + L1MA6 LINE L1 5982 6300 0 203 346 28 28 chr5 5899628 5899735 -197185797 + MIR3 SINE MIR 70 176 -32 1006 156 91 0 chr5 5899842 5900041 -197185491 + L1PA16 LINE L1 5947 6163 -3 1804 171 49 38 chr5 5900348 5900797 -197184735 - Charlie4a DNA MER1_type -11 497 44 1001 231 33 0 chr5 5903679 5903891 -197181641 - MER20 DNA MER1_type 0 219 1 219 261 31 0 chr5 5904296 5904361 -197181171 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 603 144 0 11 chr5 5904534 5904722 -197180810 - L1MB2 LINE L1 -7 6164 5815 339 136 0 0 chr5 5904722 5904781 -197180751 + (TCC)n Simple_repeat Simple_repeat 3 61 0 1995 98 56 0 chr5 5904781 5905047 -197180485 - AluSq SINE Alu -32 281 1 2763 156 4 2 chr5 5905050 5905538 -197179994 - L1MB2 LINE L1 -350 5821 5333 927 172 60 60 chr5 5907070 5907303 -197178229 + MER106A DNA MER1_type 3 235 -1 737 321 138 30 chr5 5907777 5908585 -197176947 - L2 LINE L2 -2 3311 2186 1003 238 38 61 chr5 5909000 5909395 -197176137 - L1MA9 LINE L1 -25 6287 5902 261 0 0 0 chr5 5910897 5910926 -197174606 + (CA)n Simple_repeat Simple_repeat 2 30 0 362 284 69 17 chr5 5911647 5911763 -197173769 + MIR3 SINE MIR 49 170 -38 24 0 0 0 chr5 5912212 5912236 -197173296 + AT_rich Low_complexity Low_complexity 1 24 0 1964 131 67 64 chr5 5912325 5912699 -197172833 + THE1C LTR MaLR 1 375 0 2524 107 14 3 chr5 5914131 5914477 -197171055 - L1PB1 LINE L1 -3 6148 5799 2302 153 135 7 chr5 5914581 5915032 -197170500 + MLT2B1 LTR ERVL 1 509 -11 333 0 0 0 chr5 5915784 5915821 -197169711 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 182 73 0 chr5 5915962 5916017 -197169515 - MLT1K LTR MaLR 0 588 530 12323 165 34 43 chr5 5916268 5919727 -197165805 - L1M1 LINE L1 -510 5792 2367 1062 211 124 60 chr5 5919731 5920166 -197165366 - MLT1C LTR MaLR 0 467 5 783 236 28 6 chr5 5920279 5920457 -197165075 + MER5A DNA MER1_type 4 185 -4 2068 182 63 40 chr5 5920720 5921164 -197164368 + MLT1C LTR MaLR 9 462 -5 4257 151 15 34 chr5 5924529 5924584 -197160948 - LTR8A LTR ERV1 0 727 672 1920 162 58 36 chr5 5924584 5924949 -197160583 + THE1C LTR MaLR 1 373 -2 4257 151 15 34 chr5 5924949 5925634 -197159898 - LTR8A LTR ERV1 -55 672 1 7445 54 17 0 chr5 5925924 5927208 -197158324 + L1PA7 LINE L1 4854 6152 -2 650 188 8 0 chr5 5927669 5927786 -197157746 - MLT1B LTR MaLR 0 467 350 * 1785 233 97 61 chr5 5927783 5928483 -197157049 + MER50 LTR ERV1 10 734 0 1373 142 9 108 chr5 5928484 5928800 -197156732 - MLT1B LTR MaLR -105 285 1 259 137 0 39 chr5 5930272 5930323 -197155209 - MLT2D LTR ERVL 0 464 416 734 200 23 9 chr5 5930326 5930581 -197154951 - MLT2D LTR ERVL -194 220 1 238 240 27 53 chr5 5930921 5930996 -197154536 + L3 LINE CR1 602 674 -903 507 313 129 41 chr5 5932633 5933350 -197152182 + L2 LINE L2 2544 3313 0 413 197 26 0 chr5 5933641 5933717 -197151815 + MER21B LTR ERV1 17 94 -769 446 245 73 81 chr5 5933726 5933800 -197151732 - L1ME4a LINE L1 -177 5944 5871 2588 180 19 41 chr5 5933800 5934316 -197151216 + MLT1D LTR MaLR 1 505 0 446 245 73 81 chr5 5934316 5934443 -197151089 - L1ME4a LINE L1 -250 5871 5745 3973 107 58 2 chr5 5934443 5935012 -197150520 - LTR43 LTR ERV1 -1 601 1 446 245 73 81 chr5 5935012 5935193 -197150339 - L1ME4a LINE L1 -376 5745 5564 28 48 0 0 chr5 5935687 5935729 -197149803 + AT_rich Low_complexity Low_complexity 1 42 0 1406 216 76 38 chr5 5936446 5936891 -197148641 - MLT1C LTR MaLR 0 467 6 1985 204 78 21 chr5 5936980 5937059 -197148473 + MER89 LTR ERV1 2 75 -484 2307 110 59 31 chr5 5937059 5937413 -197148119 - THE1B LTR MaLR 0 364 1 1985 204 78 21 chr5 5937413 5937444 -197148088 + MER89 LTR ERV1 75 103 -456 2381 117 0 61 chr5 5937444 5937803 -197147729 + MER1B DNA MER1_type 1 337 0 1985 204 78 21 chr5 5937803 5938215 -197147317 + MER89 LTR ERV1 103 555 -4 584 242 81 38 chr5 5940046 5940445 -197145087 - MLT1D LTR MaLR -11 615 4 21 36 0 0 chr5 5940948 5940976 -197144556 + AT_rich Low_complexity Low_complexity 1 28 0 5694 91 0 0 chr5 5943000 5943705 -197141827 - L1PA10 LINE L1 -16 6152 5448 526 85 12 0 chr5 5943705 5943787 -197141745 + L1P LINE L1 5344 5426 -742 749 226 5 0 chr5 5943927 5944117 -197141415 + L1MA4 LINE L1 6110 6300 0 2120 104 22 0 chr5 5944197 5944475 -197141057 + AluSx SINE Alu 1 284 -28 28 29 0 0 chr5 5944475 5944510 -197141022 + AT_rich Low_complexity Low_complexity 1 35 0 328 191 38 107 chr5 5944780 5944911 -197140621 - L1MA4 LINE L1 0 6300 6179 * 338 302 21 58 chr5 5944830 5945019 -197140513 - L1PA16 LINE L1 -33 6133 5952 892 250 83 70 chr5 5945105 5945561 -197139971 + MLT1C LTR MaLR 6 467 0 1785 119 42 18 chr5 5945641 5945927 -197139605 + L1MC1 LINE L1 6033 6325 -8 1516 301 191 43 chr5 5946223 5947748 -197137784 + L2 LINE L2 1137 2887 -427 2660 172 14 2 chr5 5947771 5948190 -197137342 + MSTB LTR MaLR 1 424 -2 1349 181 0 14 chr5 5948223 5948444 -197137088 - MER20 DNA MER1_type -1 218 1 4523 166 159 31 chr5 5948483 5949512 -197136020 - L1P LINE L1 -4397 1749 589 15762 90 16 0 chr5 5949528 5952412 -197133120 + L1PA7 LINE L1 3253 6153 -1 2806 113 14 0 chr5 5952462 5952832 -197132700 + THE1C LTR MaLR 1 375 0 406 204 65 19 chr5 5952847 5952955 -197132577 + MIR SINE MIR 118 230 -32 2241 185 42 81 chr5 5953397 5953938 -197131594 + MLT2B1 LTR ERVL 1 520 0 621 251 29 12 chr5 5953938 5954109 -197131423 - MLT1J2 LTR MaLR -269 181 8 210 318 16 0 chr5 5954136 5954199 -197131333 + L2 LINE L2 3248 3311 -2 28 0 0 0 chr5 5954245 5954273 -197131259 + AT_rich Low_complexity Low_complexity 1 28 0 225 239 16 43 chr5 5954273 5954457 -197131075 + (TTA)n Simple_repeat Simple_repeat 1 179 0 33 0 0 0 chr5 5954460 5954493 -197131039 + AT_rich Low_complexity Low_complexity 1 33 0 354 233 35 35 chr5 5954564 5954650 -197130882 + MIR SINE MIR 51 136 -72 404 194 0 11 chr5 5955092 5955185 -197130347 + MER53 DNA DNA 97 188 -1 1349 196 99 54 chr5 5956235 5956402 -197129130 + MLT1B LTR MaLR 1 159 -231 2199 117 3 10 chr5 5956402 5956709 -197128823 + AluSc SINE Alu 1 305 -4 1349 196 99 54 chr5 5956709 5956914 -197128618 + MLT1B LTR MaLR 159 390 0 292 324 76 0 chr5 5960767 5960912 -197124620 - L1ME4a LINE L1 -2 6119 5964 338 224 0 0 chr5 5960937 5961004 -197124528 - MLT1H LTR MaLR -2 547 481 4777 124 35 11 chr5 5961015 5961757 -197123775 - MER4E LTR ERV1 0 779 20 320 305 12 43 chr5 5962333 5962383 -197123149 - L1ME4a LINE L1 -171 5950 5900 1364 216 32 118 chr5 5962383 5962952 -197122580 - MLT2B1 LTR ERVL 0 520 1 320 305 12 43 chr5 5962952 5963065 -197122467 - L1ME4a LINE L1 -221 5900 5792 507 271 73 53 chr5 5963227 5963474 -197122058 - L2 LINE L2 -5 3308 3057 410 274 45 67 chr5 6065145 6065324 -197020208 - MER5B DNA MER1_type -3 175 1 1453 187 127 31 chr5 6066277 6066662 -197018870 - Charlie1 DNA MER1_type -58 2703 2282 412 305 64 0 chr5 6066655 6066796 -197018736 - Charlie1 DNA MER1_type -2611 150 1 * 319 348 106 28 chr5 6067548 6068189 -197017343 + L2 LINE L2 2040 2730 -584 452 301 99 6 chr5 6068315 6068620 -197016912 - L1ME LINE L1 -5605 465 125 331 239 229 0 chr5 6070002 6070111 -197015421 + L2 LINE L2 3122 3255 -17 468 230 121 40 chr5 6070614 6070788 -197014744 + L1ME LINE L1 5513 5700 -470 1160 103 7 0 chr5 6070877 6071032 -197014500 - L1PA15 LINE L1 -8 6157 6002 2089 122 13 7 chr5 6071130 6071433 -197014099 + AluSx SINE Alu 1 305 -7 2173 117 3 3 chr5 6071434 6071734 -197013798 + AluSx SINE Alu 2 301 -11 23 33 0 0 chr5 6071921 6071951 -197013581 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 6072504 6072530 -197013002 + AT_rich Low_complexity Low_complexity 1 26 0 845 265 142 0 chr5 6072564 6072783 -197012749 + MIR SINE MIR 6 255 -7 1581 206 14 89 chr5 6073194 6073270 -197012262 + MSTD LTR MaLR 1 81 -315 2324 97 3 0 chr5 6073270 6073570 -197011962 - AluY SINE Alu -10 301 1 1581 206 14 89 chr5 6073570 6073921 -197011611 + MSTD LTR MaLR 81 396 0 481 260 133 17 chr5 6073970 6074151 -197011381 + MLT1H LTR MaLR 346 547 -2 3785 105 20 0 chr5 6074373 6074879 -197010653 - L1PA10 LINE L1 -1 6167 5652 6991 114 17 39 chr5 6074901 6075131 -197010401 - L1PA10 LINE L1 -494 5674 5441 2013 132 7 3 chr5 6075131 6075418 -197010114 - AluSx SINE Alu -24 288 1 6991 114 17 39 chr5 6075418 6076623 -197008909 - L1PA10 LINE L1 -727 5441 4277 1220 204 4 4 chr5 6076644 6076874 -197008658 - L1P3 LINE L1 -4946 929 700 910 201 54 10 chr5 6077075 6077279 -197008253 + MER20 DNA MER1_type 7 219 0 830 266 64 53 chr5 6078084 6078445 -197007087 - MLT2F LTR ERVL -19 644 280 1048 196 47 17 chr5 6078461 6078696 -197006836 + MER96B DNA MER1_type? 176 417 0 545 339 23 23 chr5 6078700 6078957 -197006575 - MLT2F LTR ERVL -390 273 17 29 0 0 0 chr5 6081136 6081165 -197004367 + AT_rich Low_complexity Low_complexity 1 29 0 268 203 8 154 chr5 6082471 6082594 -197002938 + MER102a DNA MER1_type 222 326 -4 23 0 0 0 chr5 6083136 6083159 -197002373 + AT_rich Low_complexity Low_complexity 1 23 0 365 268 5 15 chr5 6083717 6083877 -197001655 + CT-rich Low_complexity Low_complexity 1 161 -330 2060 127 3 10 chr5 6083877 6084177 -197001355 - AluSx SINE Alu -13 299 2 365 268 5 15 chr5 6084177 6084213 -197001319 + CT-rich Low_complexity Low_complexity 161 491 0 465 286 15 53 chr5 6084615 6084825 -197000707 + MIR SINE MIR 62 262 0 325 334 75 93 chr5 6086916 6087248 -196998284 + L2 LINE L2 2942 3267 -5 377 327 186 10 chr5 6087451 6087757 -196997775 - L2 LINE L2 -1005 2309 1950 2486 215 18 28 chr5 6087878 6088193 -196997339 - MER68 LTR ERV1 -11 551 234 2593 109 31 14 chr5 6088193 6088551 -196996981 + THE1B LTR MaLR 1 364 0 11017 104 38 35 chr5 6088551 6090127 -196995405 + THE1B-int LTR MaLR 1 1580 0 2598 131 8 3 chr5 6090129 6090489 -196995043 + THE1B LTR MaLR 3 364 0 2486 215 18 28 chr5 6090489 6090672 -196994860 - MER68 LTR ERV1 -328 234 54 631 289 80 56 chr5 6091352 6092315 -196993217 + L1MEc LINE L1 835 1703 -4512 436 296 32 26 chr5 6092480 6092669 -196992863 + L2 LINE L2 2511 2700 -614 1983 128 3 20 chr5 6093114 6093418 -196992114 - AluSx SINE Alu -13 299 1 207 310 13 95 chr5 6094089 6094199 -196991333 + MIR3 SINE MIR 13 108 -100 2146 87 20 13 chr5 6094199 6094499 -196991033 + AluY SINE Alu 1 302 -9 207 310 13 95 chr5 6094499 6094546 -196990986 + MIR3 SINE MIR 108 157 -51 1669 168 0 38 chr5 6094849 6095164 -196990368 + AluJo SINE Alu 1 303 -9 322 336 0 8 chr5 6096281 6096403 -196989129 - L2 LINE L2 -5 3308 3188 369 258 156 21 chr5 6096502 6096688 -196988844 - Charlie8 DNA MER1_type -2141 276 66 225 0 0 0 chr5 6096709 6096734 -196988798 + (A)n Simple_repeat Simple_repeat 1 25 0 739 300 123 3 chr5 6096856 6097173 -196988359 + LTR16B LTR ERVL 20 374 -90 259 226 60 75 chr5 6098928 6099061 -196986471 - L1ME3A LINE L1 -9 6161 6031 486 233 23 8 chr5 6099170 6099299 -196986233 - L1ME3A LINE L1 -208 5962 5832 * 848 181 21 0 chr5 6099297 6099441 -196986091 + L1M3e LINE L1 158 304 -6726 2108 226 97 30 chr5 6099442 6100167 -196985365 + L1M3e LINE L1 1286 2058 -4972 1017 125 46 0 chr5 6100179 6100331 -196985201 - L1PA11 LINE L1 0 6174 6016 3353 155 11 33 chr5 6100332 6100966 -196984566 - L1MA4 LINE L1 -15 6285 5666 259 293 55 22 chr5 6100970 6101151 -196984381 - L1MEd LINE L1 -5338 781 595 340 196 0 150 chr5 6101939 6101963 -196983569 + MER105 DNA DNA 33 59 -145 4883 165 10 33 chr5 6101963 6102775 -196982757 - MER54B LTR ERVL 0 793 1 340 196 0 150 chr5 6102775 6102903 -196982629 + MER105 DNA DNA 59 162 -42 2695 166 17 23 chr5 6103328 6103798 -196981734 + MLT1C LTR MaLR 1 467 0 2060 168 25 98 chr5 6104144 6104632 -196980900 + MER66A LTR ERV1 27 478 0 24 0 0 0 chr5 6104905 6104929 -196980603 + AT_rich Low_complexity Low_complexity 1 24 0 501 309 124 0 chr5 6108217 6108411 -196977121 + MIR SINE MIR 9 226 -36 27 0 0 0 chr5 6108988 6109015 -196976517 + AT_rich Low_complexity Low_complexity 1 27 0 1399 165 15 4 chr5 6109044 6109304 -196976228 - L1MA7 LINE L1 -9 6282 6020 318 294 76 34 chr5 6109376 6109495 -196976037 + MIR3 SINE MIR 83 206 -2 1173 158 5 26 chr5 6109705 6109895 -196975637 - MER5A DNA MER1_type -3 186 1 1150 256 92 19 chr5 6109909 6110323 -196975209 + LTR16A1 LTR ERVL 14 457 0 1137 140 8 103 chr5 6112504 6112747 -196972785 - MLT1A2 LTR MaLR -154 220 1 338 342 128 53 chr5 6113089 6113537 -196971995 - L2 LINE L2 -65 3207 2725 1519 247 112 34 chr5 6113557 6114022 -196971510 + MLT1E LTR MaLR 3 503 -90 377 247 0 0 chr5 6114161 6114246 -196971286 + MLT1E LTR MaLR 569 653 -1 2205 118 3 10 chr5 6115151 6115464 -196970068 + AluSx SINE Alu 2 312 0 383 300 136 36 chr5 6115527 6115692 -196969840 + L1MCc LINE L1 1282 1429 -5693 1732 260 33 18 chr5 6115692 6116149 -196969383 - LTR40c LTR ERVL -1 464 1 383 300 136 36 chr5 6116149 6116773 -196968759 + L1MCc LINE L1 1429 2361 -4761 785 126 8 8 chr5 6116778 6116939 -196968593 + AluY SINE Alu 180 311 0 345 299 45 6 chr5 6116948 6117105 -196968427 + L1MCc LINE L1 2367 2529 -4593 432 230 67 67 chr5 6119498 6119663 -196965869 + MER5A DNA MER1_type 25 189 0 329 319 11 0 chr5 6119846 6119940 -196965592 - L2 LINE L2 -3 3310 3216 289 187 220 0 chr5 6119972 6120063 -196965469 + L2 LINE L2 3202 3312 -1 560 293 153 58 chr5 6120247 6120714 -196964818 - ERVL LTR ERVL -4057 1707 1143 192 77 0 0 chr5 6120714 6120740 -196964792 + (CAGC)n Simple_repeat Simple_repeat 1 26 0 560 293 153 58 chr5 6120740 6121010 -196964522 - ERVL LTR ERVL -4621 1143 900 1178 155 23 41 chr5 6121175 6121394 -196964138 + MER20 DNA MER1_type 1 215 -4 2315 113 89 15 chr5 6121461 6121798 -196963734 - THE1B LTR MaLR -2 362 1 220 289 132 8 chr5 6121944 6122065 -196963467 - MIR3 SINE MIR -69 139 4 353 305 153 25 chr5 6123350 6123553 -196961979 - MIR SINE MIR -10 252 24 315 217 101 0 chr5 6123943 6124012 -196961520 + MER116 DNA Mariner 1 76 -4 21 0 0 0 chr5 6124014 6124035 -196961497 + AT_rich Low_complexity Low_complexity 1 21 0 4497 101 5 15 chr5 6124361 6124967 -196960565 + MER4A LTR ERV1 1 600 0 191 287 154 37 chr5 6125701 6125837 -196959695 + MIR3 SINE MIR 19 170 -38 324 294 42 25 chr5 6125925 6126044 -196959488 + L3b LINE CR1 1129 1249 -334 304 308 68 14 chr5 6126399 6126620 -196958912 - L1ME LINE L1 -392 5729 5497 267 31 0 0 chr5 6127115 6127147 -196958385 + (TG)n Simple_repeat Simple_repeat 1 32 0 288 184 64 21 chr5 6127157 6127531 -196958001 + (TCTA)n Simple_repeat Simple_repeat 1 439 -24 312 91 0 0 chr5 6127531 6127575 -196957957 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 288 184 64 21 chr5 6127575 6127602 -196957930 + (TCTA)n Simple_repeat Simple_repeat 439 463 0 191 276 16 114 chr5 6129295 6129327 -196956205 - L2 LINE L2 -227 3045 3011 2310 125 0 0 chr5 6129327 6129640 -196955892 + AluSq SINE Alu 1 313 0 191 276 16 114 chr5 6129640 6129730 -196955802 - L2 LINE L2 -261 3011 2935 447 330 122 36 chr5 6129876 6129951 -196955581 - L2 LINE L2 -535 2779 2712 1334 208 3 61 chr5 6129951 6130118 -196955414 - AluJb SINE Alu -17 295 153 240 59 0 0 chr5 6130118 6130152 -196955380 + (TG)n Simple_repeat Simple_repeat 1 34 0 1334 208 3 61 chr5 6130152 6130297 -196955235 - AluJb SINE Alu -159 153 1 447 330 122 36 chr5 6130297 6131001 -196954531 - L2 LINE L2 -602 2712 1933 28 102 0 0 chr5 6131600 6131698 -196953834 + AT_rich Low_complexity Low_complexity 1 98 0 1048 240 71 106 chr5 6131709 6132220 -196953312 + L1MC4 LINE L1 6637 7123 -838 2679 99 34 6 chr5 6132220 6132574 -196952958 + THE1B LTR MaLR 1 364 0 1048 240 71 106 chr5 6132574 6132630 -196952902 + L1MC4 LINE L1 7123 7179 -782 2209 94 14 3 chr5 6132892 6133178 -196952354 - AluSq SINE Alu -16 297 9 261 324 135 40 chr5 6133548 6133919 -196951613 + LTR33 LTR ERVL 116 521 0 186 133 0 0 chr5 6133986 6134016 -196951516 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 219 127 36 18 chr5 6134042 6134097 -196951435 + CT-rich Low_complexity Low_complexity 2 57 0 624 136 0 68 chr5 6134097 6134288 -196951244 + (TTCCC)n Simple_repeat Simple_repeat 2 179 0 569 235 37 37 chr5 6134336 6134498 -196951034 + MER106B DNA MER1_type 897 1058 -1 180 0 0 0 chr5 6134710 6134730 -196950802 + (T)n Simple_repeat Simple_repeat 1 20 0 284 289 149 35 chr5 6134873 6135074 -196950458 + L1MC4a LINE L1 5692 5915 -1893 2316 96 0 0 chr5 6135101 6135402 -196950130 + AluY SINE Alu 1 301 -10 236 327 14 108 chr5 6135460 6135683 -196949849 - L2 LINE L2 -247 3066 2865 217 299 13 13 chr5 6135834 6135911 -196949621 - MIR SINE MIR -121 141 65 349 292 6 35 chr5 6137214 6137385 -196948147 - L1ME4a LINE L1 -278 5843 5678 683 290 98 45 chr5 6137488 6137885 -196947647 + MLT1J LTR MaLR 85 502 -9 325 359 14 14 chr5 6138162 6138307 -196947225 + MER5B DNA MER1_type 34 178 0 1002 256 209 2 chr5 6138917 6139339 -196946193 + MLT1H LTR MaLR 39 547 -2 1764 173 37 58 chr5 6139672 6140054 -196945478 + THE1C LTR MaLR 1 374 -1 680 187 65 0 chr5 6140115 6140254 -196945278 - L1MB7 LINE L1 -20 6164 6017 310 262 103 8 chr5 6140744 6140870 -196944662 - L1ME4a LINE L1 -6 6115 5978 228 127 55 0 chr5 6142277 6142332 -196943200 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 776 244 135 70 chr5 6144074 6144367 -196941165 - MLT1J LTR MaLR 0 511 182 1815 189 141 12 chr5 6144367 6144779 -196940753 - MLT1C LTR MaLR -2 465 1 776 244 135 70 chr5 6144779 6144899 -196940633 - MLT1J LTR MaLR -329 182 71 245 292 142 33 chr5 6144928 6145048 -196940484 + L2 LINE L2 3101 3233 -39 207 104 62 0 chr5 6145410 6145458 -196940074 + (TA)n Simple_repeat Simple_repeat 2 52 0 547 304 164 44 chr5 6145474 6145924 -196939608 - L2 LINE L2 -2 3311 2808 571 321 146 0 chr5 6145935 6146222 -196939310 - L2 LINE L2 -960 2354 2026 2108 208 6 0 chr5 6146383 6146744 -196938788 - MLT1A1 LTR MaLR -2 363 1 421 275 140 0 chr5 6147422 6147600 -196937932 - L2 LINE L2 -1291 2023 1821 403 164 27 0 chr5 6147868 6147941 -196937591 - L1MD1 LINE L1 -1 6241 6167 1745 191 77 9 chr5 6148086 6148436 -196937096 - MLT1A2 LTR MaLR 0 374 1 3306 247 89 70 chr5 6148439 6149776 -196935756 - MLT1A2-int LTR MaLR -5 1366 5 27 0 0 0 chr5 6149829 6149856 -196935676 + AT_rich Low_complexity Low_complexity 1 27 0 15044 154 47 13 chr5 6149876 6154824 -196930708 - L1PB1 LINE L1 -2 6865 1626 2304 96 0 3 chr5 6154824 6155126 -196930406 - AluY SINE Alu -10 301 1 15044 154 47 13 chr5 6155126 6156155 -196929377 - L1PB1 LINE L1 -5241 1626 634 1226 138 10 0 chr5 6156155 6156351 -196929181 - L1PB1 LINE L1 -6663 200 3 1559 223 36 31 chr5 6156371 6156565 -196928967 - MLT1A2 LTR MaLR -13 361 163 1874 132 4 0 chr5 6156565 6156837 -196928695 - AluSx SINE Alu -39 273 1 1559 223 36 31 chr5 6156837 6157001 -196928531 - MLT1A2 LTR MaLR -211 163 1 227 328 86 8 chr5 6157174 6157302 -196928230 + L2 LINE L2 2965 3102 -170 767 184 123 0 chr5 6157469 6157632 -196927900 - MER20 DNA MER1_type 0 219 37 265 375 15 29 chr5 6159144 6159280 -196926252 - MIR SINE MIR -58 150 17 1638 216 66 46 chr5 6159333 6159832 -196925700 - L1MB7 LINE L1 -10 6174 5666 730 188 78 42 chr5 6160399 6160591 -196924941 - MER20 DNA MER1_type -20 199 1 306 73 0 0 chr5 6160985 6161026 -196924506 + (T)n Simple_repeat Simple_repeat 1 41 0 420 213 12 0 chr5 6161180 6161260 -196924272 + MER81 DNA DNA 2 82 -32 183 263 0 0 chr5 6162317 6162355 -196923177 - L2 LINE L2 -25 3247 3210 1337 144 25 24 chr5 6162579 6162818 -196922714 + L1MA5A LINE L1 6060 6299 -1 31 0 0 0 chr5 6163337 6163368 -196922164 + AT_rich Low_complexity Low_complexity 1 31 0 200 288 0 14 chr5 6165465 6165538 -196919994 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 411 222 111 92 chr5 6165923 6166019 -196919513 + MER5B DNA MER1_type 13 115 -63 2003 177 0 0 chr5 6166019 6166330 -196919202 - AluSx SINE Alu -1 311 1 411 222 111 92 chr5 6166330 6166386 -196919146 + MER5B DNA MER1_type 115 168 -10 231 36 0 0 chr5 6166529 6166557 -196918975 + (TG)n Simple_repeat Simple_repeat 2 29 0 1964 130 7 36 chr5 6166807 6167114 -196918418 + AluSx SINE Alu 1 298 -14 204 97 0 0 chr5 6167124 6167155 -196918377 + (CA)n Simple_repeat Simple_repeat 2 32 0 1152 285 21 5 chr5 6167187 6167570 -196917962 + HsTC2c DNA Tc2 29 417 -312 580 285 121 16 chr5 6167649 6167954 -196917578 + MLT1I LTR MaLR 54 390 -19 767 259 32 16 chr5 6167991 6168242 -196917290 + HsTC2c DNA Tc2 470 724 -5 22 0 0 0 chr5 6169133 6169155 -196916377 + AT_rich Low_complexity Low_complexity 1 22 0 351 296 58 48 chr5 6169497 6169686 -196915846 + MIR3 SINE MIR 11 201 -7 261 310 112 35 chr5 6170566 6170682 -196914850 - L2 LINE L2 -5 3267 3143 438 268 60 36 chr5 6171055 6171223 -196914309 + MER5B DNA MER1_type 3 174 -4 233 214 133 31 chr5 6171784 6171882 -196913650 - MARNA DNA Mariner -198 388 281 1314 221 88 16 chr5 6172746 6173131 -196912401 + MLT1C LTR MaLR 1 413 -54 817 260 28 44 chr5 6173594 6173844 -196911688 - MIR SINE MIR -2 260 15 21 0 0 0 chr5 6174141 6174162 -196911370 + AT_rich Low_complexity Low_complexity 1 21 0 1168 295 166 16 chr5 6175681 6176638 -196908894 - L2 LINE L2 0 3313 2215 301 26 0 0 chr5 6176642 6176681 -196908851 + MLT2C1 LTR ERVL 3 41 -356 * 1567 174 50 23 chr5 6176677 6177019 -196908513 - MLT2C1 LTR ERVL -35 485 30 216 0 0 0 chr5 6177054 6177078 -196908454 + (CA)n Simple_repeat Simple_repeat 1 24 0 980 297 122 42 chr5 6177115 6177779 -196907753 - L2 LINE L2 -1093 2221 1505 181 211 0 26 chr5 6177791 6177829 -196907703 - MER5A DNA MER1_type -6 183 147 14080 134 24 15 chr5 6177835 6178334 -196907198 + Tigger1 DNA MER2_type 1 494 -1924 2400 179 17 2 chr5 6178334 6178754 -196906778 - MSTB LTR MaLR 0 426 1 14080 134 24 15 chr5 6178754 6179573 -196905959 + Tigger1 DNA MER2_type 494 1304 -1114 2783 16 0 0 chr5 6179573 6179877 -196905655 + AluYb8 SINE Alu 2 305 -13 14080 134 24 15 chr5 6179877 6180953 -196904579 + Tigger1 DNA MER2_type 1304 2418 0 535 257 219 25 chr5 6180955 6181192 -196904340 - L2 LINE L2 -1814 1500 1218 21894 149 18 16 chr5 6181192 6186517 -196899015 + L1MA3 LINE L1 1 5351 -2214 7304 145 19 7 chr5 6186552 6188973 -196896559 + L1MA3 LINE L1 5264 7718 -6 299 296 109 23 chr5 6189024 6189281 -196896251 - L2 LINE L2 -2167 1147 869 336 234 9 65 chr5 6189349 6189456 -196896076 - L2 LINE L2 -2742 572 472 443 251 77 158 chr5 6189480 6189812 -196895720 - L2 LINE L2 -260 3053 2696 2092 113 20 0 chr5 6189812 6190105 -196895427 - AluSx SINE Alu -9 303 5 443 251 77 158 chr5 6190105 6190245 -196895287 - L2 LINE L2 -617 2696 2546 457 256 139 0 chr5 6190245 6190382 -196895150 - MIR SINE MIR -85 177 22 443 251 77 158 chr5 6190382 6190898 -196894634 - L2 LINE L2 -767 2546 2021 26 64 0 0 chr5 6192518 6192565 -196892967 + AT_rich Low_complexity Low_complexity 1 47 0 312 283 89 64 chr5 6192610 6193002 -196892530 - L1ME4a LINE L1 -96 6025 5624 2340 96 0 7 chr5 6194232 6194534 -196890998 - AluSc SINE Alu -9 300 1 479 226 16 8 chr5 6196637 6196761 -196888771 - L1ME4a LINE L1 -1827 4319 4195 591 79 11 0 chr5 6196761 6196850 -196888682 - 5S rRNA rRNA -31 90 1 2854 262 27 15 chr5 6196860 6197864 -196887668 - L1ME4a LINE L1 -1955 4191 3176 409 263 56 44 chr5 6198190 6198350 -196887182 - MER5A DNA MER1_type -1 188 27 232 321 124 7 chr5 6198379 6198516 -196887016 - MIR3 SINE MIR -24 184 32 25 75 0 0 chr5 6198561 6198614 -196886918 + AT_rich Low_complexity Low_complexity 1 53 0 373 198 21 0 chr5 6198808 6198904 -196886628 + LTR37A LTR ERV1 323 420 -6 202 246 0 18 chr5 6199047 6199104 -196886428 + T-rich Low_complexity Low_complexity 2 57 0 285 178 50 79 chr5 6201210 6201311 -196884221 + MER31-int LTR ERV1 2924 3021 -1915 329 181 74 87 chr5 6201443 6201592 -196883940 + MER31-int LTR ERV1 3171 3317 -1619 3572 116 73 38 chr5 6201662 6202145 -196883387 + MER41B LTR ERV1 1 512 -123 2254 104 7 3 chr5 6202145 6202452 -196883080 - AluSx SINE Alu -4 308 1 3572 116 73 38 chr5 6202452 6202581 -196882951 + MER41B LTR ERV1 512 635 0 7888 27 15 0 chr5 6202787 6203772 -196881760 - L1PA4 LINE L1 -1429 4717 3718 7398 32 8 0 chr5 6203772 6205201 -196880331 + L1PA4 LINE L1 4716 6151 -4 211 309 0 0 chr5 6206396 6206451 -196879081 - MIR3 SINE MIR -2 206 152 266 291 46 20 chr5 6207185 6207336 -196878196 + MLT1J1 LTR MaLR 5 159 -287 895 289 72 35 chr5 6207355 6207811 -196877721 - LTR33 LTR ERVL -46 475 3 2304 160 33 16 chr5 6208929 6209354 -196876178 + MSTB1 LTR MaLR 1 432 0 574 108 0 0 chr5 6209445 6209528 -196876004 + AluSg/x SINE Alu 219 301 -9 391 369 111 17 chr5 6209633 6210037 -196875495 + L2 LINE L2 1380 1821 -1493 2237 164 24 12 chr5 6210044 6210458 -196875074 + MSTB1 LTR MaLR 1 419 -13 634 331 177 34 chr5 6210477 6210816 -196874716 + L2 LINE L2 1828 2117 -1197 7061 65 4 0 chr5 6210816 6212307 -196873225 - L1PA8 LINE L1 -5 6167 4674 634 331 177 34 chr5 6212307 6212768 -196872764 + L2 LINE L2 2117 2743 -571 372 169 14 13 chr5 6213016 6213101 -196872431 - MLT1D LTR MaLR -438 67 1 22 70 0 0 chr5 6213777 6213820 -196871712 + AT_rich Low_complexity Low_complexity 1 43 0 1130 62 0 0 chr5 6214292 6214436 -196871096 + L1PA4 LINE L1 6009 6152 -3 2025 98 38 21 chr5 6215572 6215859 -196869673 + AluSp SINE Alu 1 292 -21 325 283 28 9 chr5 6216413 6216519 -196869013 + MIR3 SINE MIR 71 178 -30 22 0 0 0 chr5 6216621 6216643 -196868889 + AT_rich Low_complexity Low_complexity 1 22 0 188 286 131 24 chr5 6217382 6217466 -196868066 + MIR SINE MIR 37 129 -133 273 245 21 21 chr5 6217508 6217602 -196867930 - MER103 DNA DNA -1 165 72 395 135 289 19 chr5 6217838 6217942 -196867590 - MER104 DNA Tc2 -3 177 46 22 0 0 0 chr5 6218738 6218760 -196866772 + AT_rich Low_complexity Low_complexity 1 22 0 514 289 20 26 chr5 6220243 6220462 -196865070 - MIR SINE MIR -5 257 41 908 293 113 3 chr5 6221044 6221372 -196864160 - LTR16C LTR ERVL 0 491 128 2098 138 143 8 chr5 6222483 6222853 -196862679 + MSTA LTR MaLR 9 428 0 26 0 0 0 chr5 6222900 6222926 -196862606 + AT_rich Low_complexity Low_complexity 1 26 0 1807 186 8 37 chr5 6223428 6223804 -196861728 - MLT1A1 LTR MaLR 0 365 1 1305 201 0 0 chr5 6224343 6224567 -196860965 - MER58A DNA MER1_type 0 224 1 2281 159 5 10 chr5 6224619 6225016 -196860516 + MLT2C1 LTR ERVL 1 395 -2 202 290 19 28 chr5 6225114 6225221 -196860311 + L2 LINE L2 2371 2476 -838 479 345 113 10 chr5 6225285 6225832 -196859700 + L2 LINE L2 2656 3266 -47 305 339 25 77 chr5 6225860 6226226 -196859306 - L2 LINE L2 -27 3245 2899 1820 140 97 32 chr5 6226715 6227057 -196858475 - THE1B LTR MaLR 0 364 1 406 35 35 0 chr5 6228124 6228181 -196857351 + L1PA4 LINE L1 6095 6153 -2 1550 112 5 5 chr5 6231003 6231226 -196854306 - pTR5 LTR ERV1 -2044 394 172 333 229 31 0 chr5 6231229 6231325 -196854207 - LTR30 LTR ERV1 -80 642 544 6596 117 62 79 chr5 6231325 6232630 -196852902 - pTR5 LTR ERV1 -413 2025 743 192 77 0 0 chr5 6233393 6233419 -196852113 + (A)n Simple_repeat Simple_repeat 1 26 0 952 218 143 47 chr5 6235367 6235752 -196849780 - MLT1F1 LTR MaLR -2 565 144 632 290 49 42 chr5 6237133 6237573 -196847959 + MLT1H LTR MaLR 29 549 0 306 359 59 30 chr5 6237620 6237807 -196847725 - L2 LINE L2 -1100 2214 2034 2456 36 40 10 chr5 6237807 6238109 -196847423 - AluY SINE Alu 0 311 1 306 359 59 30 chr5 6238109 6238325 -196847207 - L2 LINE L2 -1280 2034 1799 1245 247 44 84 chr5 6238394 6239094 -196846438 - L1MC4 LINE L1 -39 8003 7332 237 33 0 0 chr5 6239104 6239134 -196846398 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 679 165 17 9 chr5 6239134 6239249 -196846283 - FLAM_C SINE Alu -26 117 2 457 279 30 16 chr5 6239260 6239465 -196846067 - L1M LINE L1 -748 5398 5209 2115 111 3 38 chr5 6239487 6239802 -196845730 + AluSc SINE Alu 1 304 -5 21 0 0 0 chr5 6239833 6239854 -196845678 + AT_rich Low_complexity Low_complexity 1 21 0 334 300 23 0 chr5 6239939 6240069 -196845463 - L1M4 LINE L1 -1096 5050 4918 242 278 28 0 chr5 6240313 6240385 -196845147 - L1M4 LINE L1 -1575 4571 4498 23 0 0 0 chr5 6241191 6241214 -196844318 + AT_rich Low_complexity Low_complexity 1 23 0 2022 146 18 15 chr5 6241288 6241630 -196843902 - MER61A LTR ERV1 0 343 1 229 293 40 10 chr5 6242818 6242917 -196842615 + (TATG)n Simple_repeat Simple_repeat 2 103 0 298 318 60 7 chr5 6243119 6243270 -196842262 - MIR SINE MIR -30 232 74 226 125 0 0 chr5 6244841 6244873 -196840659 - MLT2C2 LTR ERVL 0 554 523 2320 165 22 2 chr5 6245040 6245440 -196840092 - MLT2C2 LTR ERVL -56 408 1 283 182 0 0 chr5 6245545 6245600 -196839932 - Charlie8 DNA MER1_type -1002 1415 1361 234 91 0 0 chr5 6245692 6245725 -196839807 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1912 129 18 7 chr5 6245776 6246079 -196839453 + AluSx SINE Alu 1 306 0 4016 136 22 14 chr5 6246080 6246748 -196838784 - L1MB1 LINE L1 -23 6145 5472 340 142 55 8 chr5 6246748 6246875 -196838657 + (TA)n Simple_repeat Simple_repeat 2 134 0 1281 129 13 67 chr5 6246875 6247206 -196838326 - L1MB1 LINE L1 -743 5403 5157 282 294 220 0 chr5 6247565 6247742 -196837790 - Charlie8 DNA MER1_type -2157 260 45 1970 216 121 0 chr5 6247826 6248307 -196837225 - MLT1F LTR MaLR 0 542 4 574 263 105 70 chr5 6248479 6248541 -196836991 + MLT1L LTR MaLR 209 267 -348 1290 73 0 0 chr5 6248541 6248705 -196836827 - L1PA8 LINE L1 0 6172 6009 574 263 105 70 chr5 6248705 6248927 -196836605 + MLT1L LTR MaLR 267 503 -112 1677 105 0 0 chr5 6250035 6250281 -196835251 - AluSg/x SINE Alu 0 310 65 1960 136 0 11 chr5 6251884 6252170 -196833362 - AluSq SINE Alu -30 283 1 978 294 59 25 chr5 6252713 6253151 -196832381 - L1MC/D LINE L1 -2041 5767 5315 461 240 72 8 chr5 6255074 6255199 -196830333 - MLT1H LTR MaLR 0 549 417 960 169 47 42 chr5 6255252 6255465 -196830067 - MER20 DNA MER1_type -5 214 1 387 41 0 0 chr5 6256470 6256519 -196829013 + (TG)n Simple_repeat Simple_repeat 2 50 0 2206 157 8 38 chr5 6256728 6257123 -196828409 + MLT1B LTR MaLR 1 383 -7 208 279 19 67 chr5 6257687 6257791 -196827741 + L3b LINE CR1 1393 1491 -92 249 307 27 20 chr5 6259425 6259575 -196825957 - L1MC/D LINE L1 -1499 4647 4497 204 200 0 0 chr5 6260615 6260660 -196824872 + CT-rich Low_complexity Low_complexity 3 47 0 2266 113 3 0 chr5 6260683 6260992 -196824540 - AluSp SINE Alu -3 310 1 191 35 0 35 chr5 6261104 6261133 -196824399 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 2198 115 0 7 chr5 6261142 6261438 -196824094 - AluSx SINE Alu -10 302 9 2047 121 3 50 chr5 6264175 6264497 -196821035 - AluSp SINE Alu -6 307 1 1053 221 174 43 chr5 6266266 6266704 -196818828 - MLT1D LTR MaLR -10 495 1 276 269 47 41 chr5 6266751 6266922 -196818610 + Charlie2 DNA MER1_type 413 584 -2278 401 229 95 56 chr5 6267083 6267262 -196818270 + Charlie2a DNA MER1_type 1496 1681 -1181 1647 233 113 53 chr5 6267462 6268246 -196817286 + Charlie2a DNA MER1_type 1807 2645 -217 705 240 88 0 chr5 6268246 6268417 -196817115 - MER5A DNA MER1_type -3 186 1 1647 233 113 53 chr5 6268417 6268461 -196817071 + Charlie2a DNA MER1_type 2645 2685 -177 196 154 39 0 chr5 6268503 6268555 -196816977 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 2085 194 52 47 chr5 6269678 6270297 -196815235 - LTR29 LTR ERV1 0 622 1 2196 81 7 24 chr5 6270454 6270749 -196814783 + AluSp SINE Alu 1 290 -23 416 293 159 21 chr5 6270758 6271048 -196814484 - L1ME4a LINE L1 -50 6071 5742 308 250 18 27 chr5 6271059 6271171 -196814361 + CT-rich Low_complexity Low_complexity 2 112 0 2106 147 3 0 chr5 6271559 6271866 -196813666 + AluSq SINE Alu 1 308 -5 27 108 0 0 chr5 6272216 6272327 -196813205 + AT_rich Low_complexity Low_complexity 1 111 0 3537 144 30 16 chr5 6272863 6273040 -196812492 - L1MA5 LINE L1 0 6300 6127 847 200 42 0 chr5 6273040 6273205 -196812327 + FAM SINE Alu 1 172 -3 3537 144 30 16 chr5 6273205 6273694 -196811838 - L1MA5 LINE L1 -173 6127 5625 513 253 77 22 chr5 6273970 6274152 -196811380 + MER117 DNA MER1_type 3 194 -3 27 29 0 0 chr5 6274511 6274545 -196810987 + AT_rich Low_complexity Low_complexity 1 34 0 183 319 159 35 chr5 6275651 6275764 -196809768 - L2 LINE L2 -37 3235 3109 434 255 176 7 chr5 6275814 6275967 -196809565 - MER5A DNA MER1_type -7 182 4 198 0 0 0 chr5 6276173 6276195 -196809337 + (T)n Simple_repeat Simple_repeat 1 22 0 8770 197 37 67 chr5 6276358 6276663 -196808869 - L1MC3 LINE L1 -1 8063 7750 1934 123 3 34 chr5 6276663 6276956 -196808576 - AluSx SINE Alu -28 284 1 8770 197 37 67 chr5 6276956 6278771 -196806761 - L1MC3 LINE L1 -314 7750 5881 6391 94 17 6 chr5 6278771 6279714 -196805818 - L1PA10 LINE L1 0 6168 5221 561 220 0 9 chr5 6279715 6279824 -196805708 - AluJo SINE Alu -85 227 120 8770 197 37 67 chr5 6279824 6280303 -196805229 - L1MC3 LINE L1 -2183 5881 5389 4340 95 5 5 chr5 6280303 6280932 -196804600 - L1PA13 LINE L1 -3 6160 5532 8770 197 37 67 chr5 6280932 6281457 -196804075 - L1MC3 LINE L1 -2675 5389 4713 2502 194 14 42 chr5 6281461 6282013 -196803519 + L1 LINE L1 3734 4269 -1877 2417 108 0 0 chr5 6282013 6282320 -196803212 + AluSc SINE Alu 1 307 -2 2502 194 14 42 chr5 6282320 6282390 -196803142 + L1 LINE L1 4269 4339 -1807 740 218 16 0 chr5 6282388 6282576 -196802956 - L1MC3 LINE L1 -1491 4724 4534 * 212 59 29 0 chr5 6282588 6282622 -196802910 + (TA)n Simple_repeat Simple_repeat 2 36 0 825 237 93 13 chr5 6282635 6282935 -196802597 - L1MC3 LINE L1 -1749 4466 4143 468 327 36 6 chr5 6283104 6283272 -196802260 - MIR SINE MIR -57 205 33 32 95 0 0 chr5 6284105 6284200 -196801332 + AT_rich Low_complexity Low_complexity 1 95 0 16208 202 20 11 chr5 6284415 6287103 -196798429 - L1PA15 LINE L1 -3 6813 4059 2227 158 44 0 chr5 6287103 6287489 -196798043 - MER57A LTR ERV1 0 403 1 16208 202 20 11 chr5 6287489 6290040 -196795492 - L1PA15 LINE L1 -2757 4059 1532 206 326 35 23 chr5 6290552 6290638 -196794894 + L2 LINE L2 3177 3263 -9 382 308 87 36 chr5 6290703 6291037 -196794495 - L1MC3 LINE L1 -3873 2523 2173 446 254 16 32 chr5 6291946 6292072 -196793460 - MIR SINE MIR -21 241 118 785 222 166 88 chr5 6292251 6292783 -196792749 + MLT1E3 LTR MaLR 1 624 0 248 227 297 16 chr5 6292786 6292914 -196792618 + MIR SINE MIR 88 251 -11 1384 213 62 37 chr5 6293616 6294020 -196791512 - MLT1C LTR MaLR -6 461 41 21 82 0 0 chr5 6294351 6294400 -196791132 + AT_rich Low_complexity Low_complexity 1 49 0 405 342 53 30 chr5 6295141 6295442 -196790090 + MLT1I LTR MaLR 37 344 -65 474 277 61 19 chr5 6295450 6295663 -196789869 + MLT1H LTR MaLR 3 224 -325 309 191 40 91 chr5 6295731 6295908 -196789624 + MLT1H LTR MaLR 325 409 0 1347 247 130 61 chr5 6296569 6297137 -196788395 - MLT1E2 LTR MaLR 0 624 1 2448 53 0 47 chr5 6297352 6297672 -196787860 + AluY SINE Alu 1 305 -6 22 35 0 0 chr5 6297696 6297725 -196787807 + AT_rich Low_complexity Low_complexity 1 29 0 421 293 140 6 chr5 6299169 6299326 -196786206 + MER5A DNA MER1_type 9 186 -3 884 259 21 13 chr5 6299345 6299581 -196785951 + MIR SINE MIR 25 262 0 1799 171 53 8 chr5 6299810 6300184 -196785348 - L1MB2 LINE L1 -4 6167 5777 387 280 95 43 chr5 6300496 6300800 -196784732 - L1ME4a LINE L1 -41 6080 5761 297 321 0 0 chr5 6300861 6300967 -196784565 - L1ME4a LINE L1 -448 5673 5568 1126 216 53 104 chr5 6300972 6301403 -196784129 + MLT2B1 LTR ERVL 6 414 0 356 176 14 54 chr5 6301535 6301609 -196783923 - L2 LINE L2 -7 3306 3236 223 186 0 0 chr5 6301831 6301874 -196783658 + A-rich Low_complexity Low_complexity 1 43 0 398 297 57 31 chr5 6301902 6302094 -196783438 - L1ME4a LINE L1 -2355 5453 5257 333 257 0 73 chr5 6302148 6302257 -196783275 - L1ME4a LINE L1 -2444 5364 5264 828 257 13 29 chr5 6302458 6302970 -196782562 - L1ME2 LINE L1 -62 6102 5493 22 0 0 0 chr5 6303441 6303463 -196782069 + AT_rich Low_complexity Low_complexity 1 22 0 1946 176 8 8 chr5 6304034 6304409 -196781123 + L1MB3 LINE L1 5480 5854 -329 268 119 0 0 chr5 6304409 6304451 -196781081 + L1M3 LINE L1 5813 5854 -329 252 143 0 0 chr5 6304451 6304493 -196781039 + L1M3 LINE L1 5813 5854 -329 1673 191 14 11 chr5 6304493 6304860 -196780672 + L1MB3 LINE L1 5813 6180 -3 856 276 83 21 chr5 6305036 6305420 -196780112 - MLT1J2 LTR MaLR -2 448 41 494 272 166 34 chr5 6306801 6307066 -196778466 - L2 LINE L2 0 3313 3014 26 0 0 0 chr5 6307654 6307680 -196777852 + AT_rich Low_complexity Low_complexity 1 26 0 28 71 0 0 chr5 6309403 6309459 -196776073 + AT_rich Low_complexity Low_complexity 1 56 0 186 350 0 30 chr5 6310482 6310582 -196774950 + MIR3 SINE MIR 107 203 -5 310 276 65 65 chr5 6311757 6311971 -196773561 - MLT1K LTR MaLR -29 559 346 425 336 60 20 chr5 6312016 6312266 -196773266 - MLT1K LTR MaLR -326 262 3 396 329 121 22 chr5 6312335 6312566 -196772966 + MIR SINE MIR 9 262 0 328 314 59 46 chr5 6312588 6312894 -196772638 + L1M4 LINE L1 3523 3832 -2314 1216 279 63 64 chr5 6313018 6313624 -196771908 + L2 LINE L2 2170 2774 -540 378 266 319 35 chr5 6313766 6313988 -196771544 + L2 LINE L2 2941 3099 -214 3433 155 15 20 chr5 6313988 6314593 -196770939 + MER7C DNA MER2_type 1 602 0 378 266 319 35 chr5 6314593 6314652 -196770880 + L2 LINE L2 3099 3302 -11 494 207 21 7 chr5 6314659 6314804 -196770728 + GA-rich Low_complexity Low_complexity 1 147 0 5322 145 44 35 chr5 6317145 6318091 -196767441 + Tigger1 DNA MER2_type 1 955 -1463 16563 166 35 8 chr5 6318098 6324406 -196761126 + L1P5 LINE L1 23 6155 -712 239 0 32 0 chr5 6324406 6324437 -196761095 + (TA)n Simple_repeat Simple_repeat 1 32 0 216 0 0 0 chr5 6324436 6324460 -196761072 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 16563 166 35 8 chr5 6324437 6324486 -196761046 + L1P5 LINE L1 6155 6534 -333 6969 139 18 22 chr5 6324491 6325638 -196759894 + Tigger1 DNA MER2_type 1276 2418 0 1475 243 0 7 chr5 6326185 6326473 -196759059 + AluJo SINE Alu 1 286 -26 705 186 81 59 chr5 6326586 6326779 -196758753 + MER20 DNA MER1_type 19 217 -2 22 35 0 0 chr5 6327659 6327688 -196757844 + AT_rich Low_complexity Low_complexity 1 29 0 892 182 18 0 chr5 6328792 6328962 -196756570 + L1MD2 LINE L1 6187 6359 0 447 19 0 0 chr5 6329549 6329601 -196755931 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1933 156 3 10 chr5 6331029 6331324 -196754208 + AluSx SINE Alu 1 293 -19 369 62 0 0 chr5 6331325 6331373 -196754159 + (TA)n Simple_repeat Simple_repeat 1 48 0 249 260 0 27 chr5 6331739 6331812 -196753720 - 7SK RNA RNA -120 73 3 2327 100 0 3 chr5 6332441 6332741 -196752791 - AluSx SINE Alu -13 299 1 286 200 0 0 chr5 6333641 6333696 -196751836 + MIR SINE MIR 113 167 -95 211 296 217 35 chr5 6333830 6334017 -196751515 + MIR3 SINE MIR 12 227 -35 2686 185 92 7 chr5 6334576 6335161 -196750371 + L1MB4 LINE L1 5541 6175 -5 246 32 0 0 chr5 6335529 6335560 -196749972 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 498 149 0 0 chr5 6335642 6335729 -196749803 + (T)n Simple_repeat Simple_repeat 1 87 0 2432 97 0 0 chr5 6336613 6336921 -196748611 - AluSq SINE Alu -4 309 2 502 295 136 30 chr5 6337242 6337581 -196747951 - L1ME LINE L1 -330 5791 5417 343 349 113 14 chr5 6338006 6338218 -196747314 - MIR SINE MIR -9 253 21 240 231 77 87 chr5 6338411 6338515 -196747017 - MIR SINE MIR -66 196 94 185 300 33 0 chr5 6338545 6338605 -196746927 + MIR SINE MIR 128 189 -73 993 123 54 74 chr5 6339312 6339515 -196746017 - MER20 DNA MER1_type -5 214 16 2260 103 3 7 chr5 6340839 6341141 -196744391 + AluSg SINE Alu 1 301 -9 326 296 74 81 chr5 6341295 6341974 -196743558 + L1ME4a LINE L1 5405 6078 -43 910 286 84 23 chr5 6342338 6342834 -196742698 + L2 LINE L2 2723 3253 -60 1540 53 5 0 chr5 6342975 6343165 -196742367 + AluY SINE Alu 116 306 -5 1510 180 92 30 chr5 6343397 6343797 -196741735 - MER69 DNA AcHobo -13 2513 2089 586 274 95 21 chr5 6344617 6345144 -196740388 - L1M4c LINE L1 -4069 2577 1926 1836 154 4 4 chr5 6345149 6345429 -196740103 - AluJb SINE Alu -19 293 14 1916 139 17 46 chr5 6345429 6345774 -196739758 - THE1B LTR MaLR 0 364 30 6684 205 25 100 chr5 6345810 6347859 -196737673 - L1M4c LINE L1 -4712 1934 5 504 32 0 0 chr5 6348070 6348132 -196737400 + (TG)n Simple_repeat Simple_repeat 1 62 0 600 263 53 13 chr5 6348196 6348348 -196737184 + MER5A DNA MER1_type 32 189 0 571 294 82 77 chr5 6348788 6349582 -196735950 - L1M4 LINE L1 -1322 4824 4027 23 33 0 0 chr5 6349752 6349782 -196735750 + AT_rich Low_complexity Low_complexity 1 30 0 557 280 116 57 chr5 6349965 6350543 -196734989 + L1MC4a LINE L1 5293 5904 -1904 428 279 38 25 chr5 6350933 6351091 -196734441 - LTR67 LTR ERVL -369 188 29 2282 112 0 0 chr5 6351348 6351643 -196733889 - AluSx SINE Alu -17 295 1 212 289 134 35 chr5 6351840 6351982 -196733550 - MIR3 SINE MIR -23 185 30 305 266 164 83 chr5 6352303 6352533 -196732999 + L2 LINE L2 2694 2904 -409 2512 195 74 55 chr5 6352533 6353076 -196732456 - MLT2B3 LTR ERVL 0 554 2 305 266 164 83 chr5 6353076 6353236 -196732296 + L2 LINE L2 2904 3116 -197 375 188 83 21 chr5 6355016 6355112 -196730420 + LTR16A1 LTR ERVL 5 106 -351 1956 158 78 45 chr5 6355157 6355375 -196730157 - MLT1B LTR MaLR -4 386 150 2243 115 3 0 chr5 6355375 6355680 -196729852 - AluSx SINE Alu -2 310 5 1956 158 78 45 chr5 6355680 6355835 -196729697 - MLT1B LTR MaLR -240 150 1 342 0 0 0 chr5 6355846 6355884 -196729648 + (T)n Simple_repeat Simple_repeat 1 38 0 2233 203 65 15 chr5 6356411 6356889 -196728643 + MLT1D LTR MaLR 1 502 -3 1156 199 5 23 chr5 6357159 6357380 -196728152 - MER58A DNA MER1_type -2 222 6 299 180 66 0 chr5 6358944 6359005 -196726527 + L1MA9 LINE L1 6243 6307 -5 24 53 0 0 chr5 6359307 6359345 -196726187 + AT_rich Low_complexity Low_complexity 1 38 0 1258 144 0 33 chr5 6359795 6360010 -196725522 + L1MA9 LINE L1 6100 6307 -5 330 293 14 21 chr5 6360456 6360596 -196724936 + GA-rich Low_complexity Low_complexity 3 141 0 253 286 0 0 chr5 6360774 6360851 -196724681 - L2 LINE L2 -2 3311 3235 238 246 15 0 chr5 6361632 6361697 -196723835 + L1MB4 LINE L1 6115 6180 0 2896 138 20 35 chr5 6362958 6363430 -196722102 + MER31A LTR ERV1 1 467 -18 1453 165 12 92 chr5 6363430 6363758 -196721774 - AluJo SINE Alu -10 302 1 2896 138 20 35 chr5 6363758 6363777 -196721755 + MER31A LTR ERV1 467 485 0 485 92 41 0 chr5 6363781 6363879 -196721653 + (TA)n Simple_repeat Simple_repeat 1 102 0 275 227 53 0 chr5 6363884 6363959 -196721573 + 7SK RNA RNA 15 93 -100 1715 241 165 44 chr5 6364834 6365461 -196720071 - L1ME3A LINE L1 -5 6165 5615 5344 78 0 0 chr5 6365461 6366124 -196719408 - L1PA8 LINE L1 -7 6165 5503 1715 241 165 44 chr5 6366124 6366765 -196718767 - L1ME3A LINE L1 -555 5615 4742 22 0 0 0 chr5 6366961 6366983 -196718549 + AT_rich Low_complexity Low_complexity 1 22 0 1814 157 17 0 chr5 6366989 6367114 -196718418 + AluJb SINE Alu 4 125 -187 2220 101 3 3 chr5 6367114 6367410 -196718122 + AluSc SINE Alu 1 296 -13 1814 157 17 0 chr5 6367410 6367571 -196717961 + AluJb SINE Alu 125 295 -17 2011 135 3 3 chr5 6368808 6369105 -196716427 - AluSq SINE Alu -15 298 2 586 267 85 6 chr5 6369715 6369891 -196715641 - MIR SINE MIR -55 207 18 20531 25 14 1 chr5 6370555 6373597 -196711935 + L1PA3 LINE L1 3100 6152 -3 247 293 49 12 chr5 6373783 6373865 -196711667 - MIR SINE MIR -91 117 33 1061 289 73 35 chr5 6374517 6375009 -196710523 + MLT1J LTR MaLR 1 511 0 2334 79 0 0 chr5 6376217 6376527 -196709005 - AluSc SINE Alu 0 310 1 891 193 37 6 chr5 6376530 6376691 -196708841 - FRAM SINE Alu -16 160 1 578 127 0 32 chr5 6377724 6377850 -196707682 + (TA)n Simple_repeat Simple_repeat 1 122 0 3218 110 0 5 chr5 6377909 6378266 -196707266 - L1PB1 LINE L1 -2 6149 5793 333 0 0 0 chr5 6378266 6378303 -196707229 + (TG)n Simple_repeat Simple_repeat 2 38 0 3218 110 0 5 chr5 6378303 6378389 -196707143 - L1PB1 LINE L1 -358 5793 5708 471 224 22 48 chr5 6378641 6378786 -196706746 + MIR SINE MIR 31 172 -36 244 203 0 127 chr5 6379078 6379108 -196706424 + MER46C DNA MER2_type 204 236 -102 1253 247 108 44 chr5 6379108 6379626 -196705906 - MLT1H1 LTR MaLR -4 551 1 244 203 0 127 chr5 6379626 6379674 -196705858 + MER46C DNA MER2_type 236 272 -66 1789 203 109 106 chr5 6379814 6379961 -196705571 - Charlie2 DNA MER1_type -33 2829 2684 8080 29 10 0 chr5 6379961 6381110 -196704422 - L1PA4 LINE L1 -3 6152 5000 1789 203 109 106 chr5 6381110 6381915 -196703617 - Charlie2 DNA MER1_type -178 2684 1874 198 250 21 0 chr5 6382390 6382438 -196703094 + L2 LINE L2 3265 3313 0 635 290 43 90 chr5 6382827 6383323 -196702209 + MLT1J2 LTR MaLR 1 442 -8 21 71 0 0 chr5 6383392 6383434 -196702098 + AT_rich Low_complexity Low_complexity 1 42 0 1741 184 10 0 chr5 6384473 6384772 -196700760 - AluJo SINE Alu -10 302 1 424 224 129 99 chr5 6384915 6385108 -196700424 - MLT1I LTR MaLR -23 386 181 1334 167 139 0 chr5 6385108 6385366 -196700166 - AluJb SINE Alu -18 294 1 424 224 129 99 chr5 6385366 6385444 -196700088 - MLT1I LTR MaLR -228 181 107 562 279 113 26 chr5 6387412 6387677 -196697855 - L2 LINE L2 -21 3292 3005 444 195 234 8 chr5 6387685 6387813 -196697719 + LTR52 LTR ERVL 1 157 -264 717 255 13 0 chr5 6387837 6387994 -196697538 + MER45A DNA AcHobo 19 177 -1 267 247 27 27 chr5 6388002 6388075 -196697457 + MER115 DNA AcHobo 477 549 -144 509 212 0 0 chr5 6388122 6388221 -196697311 - L1MD2 LINE L1 -21 6338 6240 407 221 110 8 chr5 6388224 6388351 -196697181 + Zaphod DNA AcHobo 3882 4021 -10 25 0 0 0 chr5 6388386 6388411 -196697121 + AT_rich Low_complexity Low_complexity 1 25 0 797 295 172 12 chr5 6388415 6388839 -196696693 + L2 LINE L2 1811 2302 -1012 23 0 0 0 chr5 6389155 6389178 -196696354 + AT_rich Low_complexity Low_complexity 1 23 0 198 333 20 0 chr5 6389900 6389951 -196695581 + MER5A DNA MER1_type 73 124 -65 1521 174 30 0 chr5 6390146 6390411 -196695121 - MER2 DNA MER2_type -72 273 1 453 293 135 83 chr5 6390451 6390781 -196694751 - L1ME4a LINE L1 -195 5926 5551 2365 61 0 0 chr5 6390781 6391106 -196694426 - AluY SINE Alu 0 325 1 453 293 135 83 chr5 6391106 6391361 -196694171 - L1ME4a LINE L1 -570 5551 5310 3112 74 13 2 chr5 6391363 6391756 -196693776 - L1PA13 LINE L1 0 6163 5767 1388 189 79 4 chr5 6392231 6392496 -196693036 + AluJb SINE Alu 9 293 -19 475 231 106 60 chr5 6393023 6393305 -196692227 + L1MEd LINE L1 31 325 -5794 391 283 167 24 chr5 6393562 6393855 -196691677 + L1MEd LINE L1 635 969 -5150 293 308 97 44 chr5 6394306 6394533 -196690999 + MLT1J LTR MaLR 143 381 -130 2007 129 57 48 chr5 6395527 6395899 -196689633 + THE1C LTR MaLR 1 375 0 509 279 191 38 chr5 6396307 6396647 -196688885 + MLT1J LTR MaLR 7 398 -113 624 62 0 0 chr5 6396658 6396739 -196688793 + (TTCTCC)n Simple_repeat Simple_repeat 1 81 0 396 0 0 0 chr5 6396747 6396791 -196688741 + (CA)n Simple_repeat Simple_repeat 2 45 0 497 278 32 27 chr5 6396860 6397047 -196688485 + MIR3 SINE MIR 8 195 -13 25 0 0 0 chr5 6397337 6397362 -196688170 + AT_rich Low_complexity Low_complexity 1 25 0 882 214 27 16 chr5 6398198 6398385 -196687147 + MER5A DNA MER1_type 1 189 0 554 157 90 2 chr5 6398393 6398565 -196686967 + MER58A DNA MER1_type 1 221 -3 668 310 21 8 chr5 6398590 6398832 -196686700 + MIR SINE MIR 15 259 -3 356 296 29 52 chr5 6399768 6399940 -196685592 - MER5B DNA MER1_type 0 178 22 841 368 124 7 chr5 6400354 6401169 -196684363 + L2 LINE L2 924 1833 -1481 386 289 100 54 chr5 6401512 6402613 -196682919 - L1ME LINE L1 -547 5617 4442 394 266 90 34 chr5 6402848 6403081 -196682451 - L1ME LINE L1 -2085 4061 3816 714 203 8 8 chr5 6403162 6403295 -196682237 + MLT1A1 LTR MaLR 233 365 0 8304 198 57 31 chr5 6403295 6404987 -196680545 + MLT1A1-int LTR MaLR 1 1735 0 1651 165 18 107 chr5 6404987 6405388 -196680144 + MLT1A1 LTR MaLR 1 365 0 288 368 56 52 chr5 6405514 6405783 -196679749 + L2 LINE L2 2968 3237 -35 611 275 58 116 chr5 6405925 6406151 -196679381 - MLT1J LTR MaLR -3 508 315 2202 123 0 0 chr5 6406151 6406452 -196679080 - AluSx SINE Alu -11 301 1 611 275 58 116 chr5 6406452 6406639 -196678893 - MLT1J LTR MaLR -196 315 119 198 320 0 0 chr5 6409318 6409368 -196676164 - MIR SINE MIR -72 136 87 180 0 0 0 chr5 6411555 6411575 -196673957 + (GGA)n Simple_repeat Simple_repeat 1 20 0 336 285 86 106 chr5 6412256 6412350 -196673182 - L1M2 LINE L1 -5520 1329 1235 216 0 0 0 chr5 6412350 6412374 -196673158 + (CCGCG)n Simple_repeat Simple_repeat 1 24 0 336 285 86 106 chr5 6412374 6412721 -196672811 - L1M2 LINE L1 -5614 1235 897 180 0 0 0 chr5 6417023 6417043 -196668489 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2204 95 3 29 chr5 6417270 6417585 -196667947 - AluY SINE Alu -4 307 1 351 233 38 60 chr5 6417637 6417770 -196667762 + L2 LINE L2 3184 3313 0 475 204 0 0 chr5 6418112 6418200 -196667332 + Tigger4(Zombi) DNA MER2_type 1 88 -2643 * 656 122 2 2 chr5 6418189 6418296 -196667236 + Tigger4(Zombi) DNA MER2_type 2625 2731 0 1833 202 26 19 chr5 6418531 6418952 -196666580 + L1MB8 LINE L1 5754 6177 -1 2301 116 0 0 chr5 6421261 6421563 -196663969 - AluSx SINE Alu -10 302 1 995 82 48 0 chr5 6423170 6423316 -196662216 + MER41A LTR ERV1 402 554 0 2224 85 0 69 chr5 6425305 6425623 -196659909 + AluSx SINE Alu 1 296 -16 188 402 51 8 chr5 6425855 6425972 -196659560 - L3b LINE CR1 -7 1576 1455 205 400 9 0 chr5 6426083 6426193 -196659339 - L2 LINE L2 -17 3255 3145 207 185 0 108 chr5 6427048 6427113 -196658419 - MER5B DNA MER1_type -109 69 12 23 54 0 0 chr5 6427394 6427431 -196658101 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr5 6428353 6428382 -196657150 + AT_rich Low_complexity Low_complexity 1 29 0 418 271 133 18 chr5 6429088 6429254 -196656278 - MLT1H1 LTR MaLR 0 555 371 385 268 75 10 chr5 6429291 6429501 -196656031 - MLT1G1 LTR MaLR -374 181 2 698 256 81 20 chr5 6430006 6430252 -196655280 + MIR SINE MIR 2 262 0 241 281 91 18 chr5 6430598 6430934 -196654598 + LTR33 LTR ERVL 83 512 -9 314 128 21 0 chr5 6432277 6432324 -196653208 - MLT1C LTR MaLR -77 390 343 1071 246 18 0 chr5 6432606 6432826 -196652706 - MER58A DNA MER1_type 0 224 1 429 145 0 0 chr5 6432829 6432898 -196652634 - MER116 DNA Mariner -6 74 6 1364 225 61 48 chr5 6433246 6433589 -196651943 - MLT1C LTR MaLR 0 467 115 1958 145 148 19 chr5 6433589 6433968 -196651564 - MSTA LTR MaLR 0 428 1 1364 225 61 48 chr5 6433968 6434082 -196651450 - MLT1C LTR MaLR -352 115 4 2117 112 20 3 chr5 6435320 6435616 -196649916 - AluSq SINE Alu -8 305 5 2225 123 0 0 chr5 6436483 6436792 -196648740 - AluSx SINE Alu -3 309 1 2215 226 29 6 chr5 6436799 6437320 -196648212 - L1MC3 LINE L1 -19 7766 7234 365 303 76 0 chr5 6437587 6437732 -196647800 + L2 LINE L2 3156 3311 -2 21 0 0 0 chr5 6440307 6440328 -196645204 + AT_rich Low_complexity Low_complexity 1 21 0 470 215 54 0 chr5 6440459 6440552 -196644980 - MER5A DNA MER1_type -85 104 7 260 172 46 0 chr5 6442073 6442160 -196643372 + (TG)n Simple_repeat Simple_repeat 1 91 0 261 235 286 25 chr5 6442195 6442314 -196643218 + L2 LINE L2 3123 3272 0 1767 197 33 0 chr5 6443012 6443342 -196642190 + MER47B DNA MER2_type 2 342 -76 2090 161 24 0 chr5 6443600 6443936 -196641596 - MER2 DNA MER2_type 0 344 1 2081 193 19 61 chr5 6443977 6444500 -196641032 + MLT1D LTR MaLR 1 501 -4 252 0 0 0 chr5 6445294 6445322 -196640210 + (TA)n Simple_repeat Simple_repeat 2 29 0 266 359 36 36 chr5 6445862 6446057 -196639475 + MIR SINE MIR 20 214 -48 981 143 65 32 chr5 6446539 6446755 -196638777 - L1MA8 LINE L1 -1 6290 6068 229 224 45 15 chr5 6447973 6448040 -196637492 - MER116 DNA Mariner -6 74 6 209 387 0 0 chr5 6448076 6448151 -196637381 + L2 LINE L2 3239 3313 0 459 308 137 12 chr5 6448259 6448587 -196636945 + L2 LINE L2 2945 3313 0 2342 84 0 0 chr5 6448802 6449117 -196636415 + AluSq SINE Alu 1 315 0 227 287 77 107 chr5 6449507 6449807 -196635725 - L2 LINE L2 -49 3223 2933 2540 71 0 0 chr5 6450346 6450656 -196634876 - AluY SINE Alu -1 310 1 21 0 0 0 chr5 6453019 6453040 -196632492 + AT_rich Low_complexity Low_complexity 1 21 0 244 379 107 22 chr5 6453641 6454005 -196631527 + L2 LINE L2 2919 3313 0 2409 85 7 0 chr5 6454140 6454445 -196631087 - AluSg SINE Alu -3 307 1 21 0 0 0 chr5 6454743 6454764 -196630768 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 6456254 6456277 -196629255 + AT_rich Low_complexity Low_complexity 1 23 0 204 211 0 0 chr5 6456969 6457007 -196628525 + (CA)n Simple_repeat Simple_repeat 1 38 0 521 209 0 0 chr5 6457658 6457768 -196627764 + MER53 DNA DNA 71 180 -9 183 275 43 29 chr5 6458826 6458895 -196626637 - L2 LINE L2 -84 3229 3160 660 247 60 47 chr5 6460105 6460340 -196625192 - MER74A LTR ERVL -310 248 11 672 222 60 0 chr5 6460629 6460796 -196624736 + MIR SINE MIR 64 240 -22 2095 118 3 7 chr5 6462034 6462321 -196623211 + AluSx SINE Alu 1 286 -26 426 231 110 99 chr5 6462350 6462532 -196623000 - L2 LINE L2 -22 3291 3108 305 243 87 0 chr5 6462783 6462886 -196622646 + L2 LINE L2 3196 3307 -6 21 0 0 0 chr5 6463381 6463402 -196622130 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 6464195 6464216 -196621316 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 6464345 6464376 -196621156 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr5 6464878 6464912 -196620620 + AT_rich Low_complexity Low_complexity 1 34 0 378 238 24 0 chr5 6465051 6465177 -196620355 + (TA)n Simple_repeat Simple_repeat 2 130 0 3371 152 9 0 chr5 6465184 6465717 -196619815 - L1MC1 LINE L1 -8 6325 5788 274 309 21 0 chr5 6465994 6466091 -196619441 + MIR SINE MIR 56 154 -108 349 310 76 38 chr5 6466152 6466336 -196619196 + L2 LINE L2 3123 3313 0 1559 115 17 0 chr5 6466944 6467178 -196618354 - L1MC1 LINE L1 -149 6184 5947 24 0 0 0 chr5 6467905 6467929 -196617603 + AT_rich Low_complexity Low_complexity 1 24 0 704 241 32 27 chr5 6470928 6471148 -196614384 + MIR SINE MIR 31 251 -11 523 319 103 67 chr5 6471294 6471904 -196613628 - HAL1 LINE L1 -760 1747 1160 219 69 0 0 chr5 6471904 6471933 -196613599 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3037 115 2 9 chr5 6471933 6472367 -196613165 - L1PA8 LINE L1 -10 6162 5732 523 319 103 67 chr5 6472367 6472588 -196612944 - HAL1 LINE L1 -1346 1161 885 554 178 9 146 chr5 6473238 6473457 -196612075 - MER53 DNA DNA 0 189 1 243 314 11 38 chr5 6475064 6475249 -196610283 + GA-rich Low_complexity Low_complexity 1 180 0 770 263 52 0 chr5 6475629 6475823 -196609709 - MER63A DNA MER1_type -6 204 1 2233 118 3 10 chr5 6477133 6477446 -196608086 + AluSx SINE Alu 1 311 -1 860 224 29 24 chr5 6478150 6478360 -196607172 + MER20 DNA MER1_type 1 211 -8 210 211 307 26 chr5 6478751 6478865 -196606667 - MIR SINE MIR 0 262 117 873 192 12 35 chr5 6478964 6479136 -196606396 - AluJo SINE Alu -2 310 143 1714 143 105 46 chr5 6479139 6479490 -196606042 - THE1C LTR MaLR -3 372 1 9526 135 40 44 chr5 6479490 6481072 -196604460 - THE1C-int LTR MaLR -1 1579 3 1224 208 94 29 chr5 6481091 6481433 -196604099 - THE1C LTR MaLR -9 366 3 755 185 0 55 chr5 6481434 6481580 -196603952 - AluJo SINE Alu -164 148 11 386 174 130 11 chr5 6481925 6482017 -196603515 + L1MC/D LINE L1 5375 5477 -2331 248 356 20 0 chr5 6482569 6482670 -196602862 - L2 LINE L2 -17 3255 3153 1906 125 45 3 chr5 6483152 6483440 -196602092 + AluSx SINE Alu 4 303 -9 186 189 0 0 chr5 6484756 6484793 -196600739 + CT-rich Low_complexity Low_complexity 3 39 0 22 0 0 0 chr5 6485238 6485260 -196600272 + AT_rich Low_complexity Low_complexity 1 22 0 266 91 0 0 chr5 6485260 6485304 -196600228 - L1PA3 LINE L1 0 6155 6112 292 293 97 27 chr5 6485355 6485655 -196599877 + L1ME4a LINE L1 5743 6063 -58 1042 17 0 0 chr5 6486264 6486380 -196599152 + L1PA4 LINE L1 6034 6149 -6 796 320 33 27 chr5 6487475 6487812 -196597720 - MLT1I LTR MaLR 0 409 71 225 294 209 35 chr5 6488310 6488511 -196597021 - MIR SINE MIR -12 250 15 295 304 36 9 chr5 6488754 6488866 -196596666 + MIR SINE MIR 34 148 -114 2210 96 0 0 chr5 6489075 6489385 -196596147 + AluSg SINE Alu 1 310 0 272 158 129 109 chr5 6490339 6490440 -196595092 + MIR SINE MIR 84 186 -76 2242 105 0 3 chr5 6490970 6491265 -196594267 + AluSg SINE Alu 1 294 -16 1575 39 0 0 chr5 6492003 6492181 -196593351 - L1PA4 LINE L1 -3 6152 5975 1087 224 72 36 chr5 6492620 6492951 -196592581 + MER2 DNA MER2_type 2 344 0 282 228 81 87 chr5 6493143 6493292 -196592240 + MER5A DNA MER1_type 18 165 -24 * 301 284 97 30 chr5 6493173 6493307 -196592225 - MER5A DNA MER1_type -29 160 18 23 33 0 0 chr5 6493848 6493878 -196591654 + AT_rich Low_complexity Low_complexity 1 30 0 1119 203 14 27 chr5 6494174 6494396 -196591136 + MER20 DNA MER1_type 1 219 0 5580 114 10 2 chr5 6495387 6496212 -196589320 - L1PA13 LINE L1 0 6163 5333 24 85 0 0 chr5 6497870 6497929 -196587603 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr5 6498508 6498538 -196586994 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr5 6498569 6498594 -196586938 + AT_rich Low_complexity Low_complexity 1 25 0 1751 233 99 42 chr5 6498632 6499185 -196586347 - MLT1E LTR MaLR -2 591 7 2631 46 0 0 chr5 6500175 6500481 -196585051 + AluY SINE Alu 1 306 -5 202 306 35 12 chr5 6500715 6500800 -196584732 - MIR3 SINE MIR -19 189 103 2193 95 0 3 chr5 6502826 6503156 -196582376 + AluY SINE Alu 1 329 0 3344 203 23 5 chr5 6504605 6505225 -196580307 + MER82 DNA MER2_type 23 653 0 4838 97 14 0 chr5 6508792 6509421 -196576111 - L1PA11 LINE L1 0 6174 5537 262 221 23 107 chr5 6509665 6509796 -196575736 + L3 LINE CR1 769 888 -689 181 242 0 0 chr5 6509956 6509989 -196575543 - MIR SINE MIR -24 238 206 25 75 0 0 chr5 6511571 6511624 -196573908 + AT_rich Low_complexity Low_complexity 1 53 0 2481 62 0 0 chr5 6512706 6512997 -196572535 - AluY SINE Alu -20 291 1 3645 116 0 15 chr5 6513673 6514199 -196571333 + L1PB1 LINE L1 5634 6151 0 26 30 0 0 chr5 6514199 6514232 -196571300 + AT_rich Low_complexity Low_complexity 1 33 0 483 267 45 11 chr5 6514699 6514875 -196570657 + L1MA9 LINE L1 6101 6282 -30 204 234 47 16 chr5 6514994 6515058 -196570474 + CT-rich Low_complexity Low_complexity 1 66 0 1697 238 118 19 chr5 6515812 6516295 -196569237 - MER77 LTR ERV1 -21 584 54 2267 118 16 0 chr5 6520734 6521040 -196564492 + AluSx SINE Alu 1 311 -1 594 249 62 8 chr5 6522176 6522363 -196563169 - MIR SINE MIR -19 243 42 857 209 73 0 chr5 6522521 6522712 -196562820 - MER58A DNA MER1_type 0 224 20 27 29 0 0 chr5 6523927 6523961 -196561571 + AT_rich Low_complexity Low_complexity 1 34 0 230 289 106 22 chr5 6524101 6524281 -196561251 - L1ME LINE L1 -199 5922 5728 26 30 0 0 chr5 6524657 6524690 -196560842 + AT_rich Low_complexity Low_complexity 1 33 0 214 206 29 0 chr5 6524753 6524821 -196560711 + GA-rich Low_complexity Low_complexity 1 70 0 2789 283 73 44 chr5 6527329 6529038 -196556494 + L2 LINE L2 1559 3310 -3 280 288 81 119 chr5 6529227 6529512 -196556020 + L2 LINE L2 2998 3271 -1 24 32 0 0 chr5 6529628 6529659 -196555873 + AT_rich Low_complexity Low_complexity 1 31 0 423 56 0 0 chr5 6530200 6530254 -196555278 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 308 164 15 0 chr5 6530258 6530325 -196555207 + (TA)n Simple_repeat Simple_repeat 1 68 0 1960 136 4 0 chr5 6531057 6531336 -196554196 - AluSg SINE Alu -30 280 1 2136 62 44 0 chr5 6531887 6532221 -196553311 - AluY SINE Alu 0 346 1 444 237 142 24 chr5 6532317 6532486 -196553046 - MIR SINE MIR -11 251 63 360 254 53 95 chr5 6532999 6533188 -196552344 - L2 LINE L2 -25 3288 3108 935 305 63 50 chr5 6533226 6533889 -196551643 - L2 LINE L2 -433 2881 2210 373 313 78 28 chr5 6536433 6536859 -196548673 + L1ME LINE L1 5218 5664 -502 2101 128 0 13 chr5 6537338 6537643 -196547889 - AluSg SINE Alu -8 302 2 206 278 0 0 chr5 6537949 6538003 -196547529 + MIR SINE MIR 85 138 -124 1417 262 16 26 chr5 6539000 6539507 -196546025 + L1 LINE L1 2641 3142 -3004 1442 214 16 46 chr5 6539943 6540099 -196545433 + MLT1A1 LTR MaLR 1 160 -205 2464 57 0 7 chr5 6540099 6540400 -196545132 + AluY SINE Alu 1 299 -12 1442 214 16 46 chr5 6540400 6540613 -196544919 + MLT1A1 LTR MaLR 160 359 -6 848 200 56 37 chr5 6541457 6541672 -196543860 - MER20 DNA MER1_type 0 219 1 22 0 0 0 chr5 6542413 6542435 -196543097 + AT_rich Low_complexity Low_complexity 1 22 0 496 314 101 5 chr5 6543428 6543635 -196541897 - MIR SINE MIR -11 251 25 1879 167 5 32 chr5 6545470 6545841 -196539691 + MER46B DNA MER2_type 1 236 0 2851 3 0 0 chr5 6546408 6546714 -196538818 - AluYa5 SINE Alu -5 306 1 21 0 0 0 chr5 6547373 6547394 -196538138 + AT_rich Low_complexity Low_complexity 1 21 0 1851 130 3 7 chr5 6547526 6547819 -196537713 - L1PA8A LINE L1 0 6131 5840 183 265 120 34 chr5 6548653 6548770 -196536762 - MIR SINE MIR -71 191 65 358 280 19 28 chr5 6549258 6549365 -196536167 + MIR SINE MIR 36 141 -67 661 263 122 10 chr5 6549594 6549799 -196535733 + MIR SINE MIR 13 240 -22 559 234 3 6 chr5 6550156 6550511 -196535021 + (TGG)n Simple_repeat Simple_repeat 1 353 0 2236 285 63 34 chr5 6550611 6551982 -196533550 + L2 LINE L2 1907 3310 -3 280 288 81 119 chr5 6552171 6552456 -196533076 + L2 LINE L2 2998 3271 -1 24 32 0 0 chr5 6552572 6552603 -196532929 + AT_rich Low_complexity Low_complexity 1 31 0 423 56 0 0 chr5 6553145 6553199 -196532333 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 299 167 15 0 chr5 6553204 6553270 -196532262 + (TA)n Simple_repeat Simple_repeat 2 68 0 1960 136 4 0 chr5 6554002 6554281 -196531251 - AluSg SINE Alu -30 280 1 2136 62 44 0 chr5 6554833 6555167 -196530365 - AluY SINE Alu 0 346 1 444 237 142 24 chr5 6555263 6555432 -196530100 - MIR SINE MIR -11 251 63 360 254 53 95 chr5 6555945 6556134 -196529398 - L2 LINE L2 -25 3288 3108 935 305 63 50 chr5 6556172 6556835 -196528697 - L2 LINE L2 -433 2881 2210 373 313 78 28 chr5 6559378 6559804 -196525728 + L1ME LINE L1 5218 5664 -502 2031 79 4 8 chr5 6560283 6560550 -196524982 - AluYa5 SINE Alu -8 303 38 24 32 0 0 chr5 6560646 6560677 -196524855 + AT_rich Low_complexity Low_complexity 1 31 0 216 316 61 10 chr5 6562167 6562265 -196523267 + MIR SINE MIR 32 134 -128 339 333 23 0 chr5 6563199 6563328 -196522204 + MIR SINE MIR 39 170 -92 2017 121 7 7 chr5 6563731 6564020 -196521512 - AluSx SINE Alu -23 289 1 267 357 25 19 chr5 6565350 6565507 -196520025 + MIR SINE MIR 90 247 -15 516 229 52 104 chr5 6566754 6566985 -196518547 - MER20 DNA MER1_type 0 219 1 267 357 25 19 chr5 6568742 6568899 -196516633 - MIR SINE MIR -15 247 90 2122 120 3 0 chr5 6570233 6570517 -196515015 + AluSx SINE Alu 1 317 0 268 31 0 0 chr5 6570517 6570549 -196514983 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 339 333 23 0 chr5 6570920 6571049 -196514483 - MIR SINE MIR -92 170 39 216 316 61 10 chr5 6572044 6572142 -196513390 - MIR SINE MIR -128 134 32 24 32 0 0 chr5 6573632 6573663 -196511869 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr5 6573866 6573901 -196511631 + AT_rich Low_complexity Low_complexity 1 35 0 2954 72 0 5 chr5 6573919 6574308 -196511224 - L1PA8 LINE L1 -2 6170 5784 2560 175 24 42 chr5 6574609 6575186 -196510346 - L1MB7 LINE L1 0 6184 5618 647 206 217 0 chr5 6576748 6576923 -196508609 - MIR SINE MIR -5 257 45 205 323 0 32 chr5 6576957 6577081 -196508451 + (TATG)n Simple_repeat Simple_repeat 4 123 0 * 232 281 0 0 chr5 6577018 6577082 -196508450 + (TG)n Simple_repeat Simple_repeat 1 64 0 1270 257 54 28 chr5 6577339 6577873 -196507659 - MER74B LTR ERVL -6 616 69 288 0 0 0 chr5 6577977 6578009 -196507523 + (TG)n Simple_repeat Simple_repeat 1 32 0 28 29 0 0 chr5 6579198 6579233 -196506299 + AT_rich Low_complexity Low_complexity 1 35 0 191 309 73 109 chr5 6579695 6580025 -196505507 - L2 LINE L2 -5 3267 2950 359 241 68 2 chr5 6580259 6580467 -196505065 - L1ME3A LINE L1 -285 5885 5647 444 254 273 5 chr5 6580613 6580818 -196504714 - MIR SINE MIR -1 261 2 240 244 98 12 chr5 6581514 6581596 -196503936 - L2 LINE L2 -36 3277 3189 294 284 77 0 chr5 6581668 6581823 -196503709 + HERVL74 LTR ERVL 1768 1934 -3751 243 159 0 0 chr5 6581856 6581900 -196503632 - L1MA9 LINE L1 -39 6273 6230 286 322 103 21 chr5 6582005 6582247 -196503285 - L2 LINE L2 -164 3149 2888 614 315 136 33 chr5 6582289 6582927 -196502605 - L2 LINE L2 -430 2884 2181 216 286 26 26 chr5 6583294 6583371 -196502161 + MIR SINE MIR 107 183 -79 2483 80 0 0 chr5 6585331 6585642 -196499890 - AluY SINE Alu 0 311 1 207 100 0 0 chr5 6585763 6585793 -196499739 + (T)n Simple_repeat Simple_repeat 1 30 0 202 279 58 58 chr5 6587204 6587308 -196498224 + MIR3 SINE MIR 105 208 0 2364 98 0 16 chr5 6588160 6588467 -196497065 + AluSg SINE Alu 1 302 -8 200 211 0 0 chr5 6589479 6589517 -196496015 + (TATG)n Simple_repeat Simple_repeat 3 40 0 180 0 0 0 chr5 6589517 6589537 -196495995 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 1378 22 0 22 chr5 6589537 6589721 -196495811 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 570 187 187 28 chr5 6589724 6589906 -196495626 + MER20 DNA MER1_type 1 211 -8 1703 199 0 13 chr5 6591929 6592236 -196493296 - AluJo SINE Alu -9 303 1 468 0 0 0 chr5 6592267 6592319 -196493213 + (CA)n Simple_repeat Simple_repeat 1 52 0 917 260 22 30 chr5 6592447 6592910 -196492622 - MLT1H1 LTR MaLR -34 521 4 197 379 97 0 chr5 6594943 6595046 -196490486 - L2 LINE L2 0 3272 3160 1511 232 55 110 chr5 6595188 6596404 -196489128 - L1MC5 LINE L1 -64 7897 6749 338 325 118 19 chr5 6596432 6596644 -196488888 - L1MC4a LINE L1 -1162 6646 6414 1051 314 26 30 chr5 6596996 6597563 -196487969 - L1MC4a LINE L1 -1846 5962 5398 187 341 110 0 chr5 6597566 6597648 -196487884 - L2 LINE L2 -9 3263 3173 229 186 0 0 chr5 6598510 6598553 -196486979 - MER81 DNA DNA -1 113 71 1630 233 29 16 chr5 6598614 6599060 -196486472 - MLT1C LTR MaLR 0 467 16 315 0 0 0 chr5 6599604 6599639 -196485893 + (CA)n Simple_repeat Simple_repeat 1 35 0 25 51 0 0 chr5 6603030 6603069 -196482463 + AT_rich Low_complexity Low_complexity 1 39 0 604 305 40 22 chr5 6604162 6604388 -196481144 - L2 LINE L2 -8 3305 3076 1270 242 49 20 chr5 6604511 6605003 -196480529 + L1ME1 LINE L1 4743 5248 -898 227 154 218 26 chr5 6605054 6605132 -196480400 + L1ME1 LINE L1 5254 5346 -828 2101 243 40 29 chr5 6605137 6605862 -196479670 + L1ME1 LINE L1 5430 6162 -4 2132 177 57 7 chr5 6606157 6606563 -196478969 - MSTB LTR MaLR 0 426 1 715 202 50 15 chr5 6606958 6607156 -196478376 + MER3 DNA MER1_type 1 205 -4 260 373 40 17 chr5 6607283 6607460 -196478072 + MIR3 SINE MIR 21 201 -7 2396 77 0 0 chr5 6607574 6607872 -196477660 + AluY SINE Alu 1 298 -13 287 293 99 5 chr5 6608205 6608417 -196477115 - MLT1L LTR MaLR -17 598 367 1500 194 89 23 chr5 6608648 6609039 -196476493 - MER96B DNA MER1_type 0 417 1 2228 97 3 0 chr5 6612946 6613244 -196472288 - AluSq SINE Alu -14 299 1 313 333 54 42 chr5 6614894 6615098 -196470434 - MIR SINE MIR -48 214 8 226 324 103 80 chr5 6615605 6615917 -196469615 - L2 LINE L2 0 3272 2954 432 338 118 12 chr5 6618487 6618886 -196466646 + L2 LINE L2 2152 2592 -722 441 161 136 0 chr5 6619080 6619210 -196466322 + MER58B DNA MER1_type 181 337 -4 413 315 170 16 chr5 6619211 6619672 -196465860 + L2 LINE L2 2752 3285 -28 1262 70 13 0 chr5 6620834 6621139 -196464393 + (TTTCC)n Simple_repeat Simple_repeat 1 490 0 1058 195 47 9 chr5 6621233 6621448 -196464084 - MER58A DNA MER1_type 0 224 2 958 170 0 0 chr5 6621625 6621766 -196463766 + AluJo SINE Alu 1 141 -171 338 108 15 0 chr5 6621783 6621848 -196463684 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 27 0 0 0 chr5 6621849 6621876 -196463656 + AT_rich Low_complexity Low_complexity 1 27 0 2400 227 6 52 chr5 6623213 6623842 -196461690 - MER77 LTR ERV1 0 605 6 289 160 266 11 chr5 6624100 6624194 -196461338 + MER33 DNA MER1_type 2 119 -205 1986 134 0 7 chr5 6624240 6624561 -196460971 - AluSx SINE Alu 0 319 1 321 254 0 0 chr5 6624574 6624645 -196460887 + MER33 DNA MER1_type 293 363 0 263 284 71 55 chr5 6624718 6624845 -196460687 + L2 LINE L2 3167 3295 -18 22 35 0 0 chr5 6627104 6627133 -196458399 + AT_rich Low_complexity Low_complexity 1 29 0 314 260 21 21 chr5 6627238 6627334 -196458198 - L1MC4 LINE L1 -1333 6709 6614 400 257 9 9 chr5 6627341 6627446 -196458086 - LTR28 LTR ERV1 0 1020 916 1051 249 114 79 chr5 6627495 6628253 -196457279 - LTR1B LTR ERV1 -37 983 1 398 237 45 13 chr5 6628253 6628409 -196457123 + (TA)n Simple_repeat Simple_repeat 1 161 0 364 278 295 0 chr5 6631267 6631440 -196454092 + MIR SINE MIR 1 224 -38 180 216 0 0 chr5 6632047 6632098 -196453434 + T-rich Low_complexity Low_complexity 1 51 0 280 0 50 0 chr5 6632492 6632532 -196453000 + (TA)n Simple_repeat Simple_repeat 1 42 0 399 73 0 0 chr5 6632946 6633001 -196452531 + (TG)n Simple_repeat Simple_repeat 1 55 0 259 207 0 35 chr5 6634541 6634599 -196450933 + CT-rich Low_complexity Low_complexity 3 58 0 26 50 0 0 chr5 6636317 6636357 -196449175 + AT_rich Low_complexity Low_complexity 1 40 0 785 275 42 21 chr5 6636656 6636896 -196448636 - MIR SINE MIR -10 252 8 456 155 10 10 chr5 6639299 6639396 -196446136 + MER53 DNA DNA 1 97 -92 196 275 0 0 chr5 6639436 6639476 -196446056 + L2 LINE L2 3256 3295 -18 225 338 104 19 chr5 6639503 6639657 -196445875 + MIR SINE MIR 77 243 -19 1310 197 29 65 chr5 6642394 6642779 -196442753 - MER93b LTR ERV1 -2 371 1 186 227 239 23 chr5 6643569 6643657 -196441875 + MER5A DNA MER1_type 40 146 -43 271 0 51 0 chr5 6643719 6643758 -196441774 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2229 47 0 0 chr5 6643772 6644030 -196441502 - AluY SINE Alu -14 297 40 999 174 46 0 chr5 6644222 6644418 -196441114 - MER2 DNA MER2_type -135 210 6 244 281 31 0 chr5 6644630 6644694 -196440838 - L2 LINE L2 -14 3299 3234 634 222 119 0 chr5 6644732 6644908 -196440624 + MER58A DNA MER1_type 1 197 -27 223 315 44 66 chr5 6645271 6645387 -196440145 + MER5A DNA MER1_type 1 127 -62 2088 112 10 27 chr5 6645387 6645683 -196439849 - AluSq SINE Alu -22 291 1 223 315 44 66 chr5 6645683 6645745 -196439787 + MER5A DNA MER1_type 127 189 0 22 35 0 0 chr5 6647265 6647294 -196438238 + AT_rich Low_complexity Low_complexity 1 29 0 1452 168 27 8 chr5 6647380 6647642 -196437890 - AluSx SINE Alu -5 307 41 1841 114 4 15 chr5 6647642 6647914 -196437618 + AluSx SINE Alu 16 285 -27 231 242 21 74 chr5 6649115 6649210 -196436322 + MIR SINE MIR 103 192 -70 2329 70 0 0 chr5 6649811 6650116 -196435416 + AluY SINE Alu 1 305 0 2094 127 43 0 chr5 6650230 6650529 -196435003 + AluSx SINE Alu 1 312 0 198 303 30 0 chr5 6651175 6651241 -196434291 - MIR SINE MIR -87 121 54 225 310 141 49 chr5 6651402 6651586 -196433946 + MIR3 SINE MIR 3 203 -5 240 59 0 0 chr5 6651709 6651743 -196433789 + (ATGGTG)n Simple_repeat Simple_repeat 2 35 0 564 251 84 6 chr5 6652514 6652687 -196432845 - MIR SINE MIR -9 253 64 2091 132 24 32 chr5 6652854 6653232 -196432300 - THE1C LTR MaLR 0 375 1 1565 177 0 28 chr5 6653444 6653727 -196431805 - AluJb SINE Alu -16 296 22 1561 183 3 21 chr5 6654938 6655259 -196430273 - AluJb SINE Alu 0 316 1 2150 151 35 14 chr5 6657079 6657378 -196428154 + L1MA8 LINE L1 5860 6172 -119 207 0 0 0 chr5 6657378 6657401 -196428131 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2150 151 35 14 chr5 6657401 6657524 -196428008 + L1MA8 LINE L1 6172 6291 0 3524 227 68 49 chr5 6657737 6659052 -196426480 + L1MC4 LINE L1 6702 8040 -2 925 243 11 21 chr5 6659600 6659884 -196425648 - MER33 DNA MER1_type 0 324 44 180 0 0 0 chr5 6661811 6661831 -196423701 + (T)n Simple_repeat Simple_repeat 1 20 0 200 83 0 28 chr5 6662407 6662443 -196423089 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2697 70 26 0 chr5 6662443 6662829 -196422703 - L1PA4 LINE L1 -24 6131 5736 864 230 9 28 chr5 6662869 6663086 -196422446 + MER20 DNA MER1_type 6 218 -1 444 152 30 0 chr5 6663289 6663388 -196422144 + (TA)n Simple_repeat Simple_repeat 2 103 0 28 29 0 0 chr5 6663456 6663491 -196422041 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 6663631 6663663 -196421869 + AT_rich Low_complexity Low_complexity 1 32 0 429 171 67 98 chr5 6663891 6664055 -196421477 + MER58B DNA MER1_type 175 333 -8 217 322 0 0 chr5 6664056 6664115 -196421417 + L2 LINE L2 3255 3313 0 411 238 81 31 chr5 6664647 6664807 -196420725 - MLT1J2 LTR MaLR -219 231 64 255 299 39 0 chr5 6664970 6665047 -196420485 + MIR SINE MIR 52 131 -77 494 310 33 5 chr5 6665327 6665511 -196420021 - MIR SINE MIR -43 219 31 953 266 83 32 chr5 6665622 6666054 -196419478 - LTR16A1 LTR ERVL -1 456 3 390 282 17 0 chr5 6667462 6667579 -196417953 + LTR16A1 LTR ERVL 21 139 -318 484 294 69 40 chr5 6667662 6668189 -196417343 + L1MDa LINE L1 1244 1828 -4830 320 294 29 44 chr5 6668239 6668375 -196417157 + HAL1 LINE L1 362 495 -2012 294 237 0 0 chr5 6668423 6668499 -196417033 + (TA)n Simple_repeat Simple_repeat 1 76 0 298 191 186 55 chr5 6668784 6669020 -196416512 + HAL1 LINE L1 908 1174 -1333 788 290 82 22 chr5 6669054 6669506 -196416026 + HAL1 LINE L1 1756 2234 -273 249 254 16 25 chr5 6669520 6669642 -196415890 + HAL1 LINE L1 2270 2390 -117 24 32 0 0 chr5 6670350 6670381 -196415151 + AT_rich Low_complexity Low_complexity 1 31 0 817 185 6 0 chr5 6670472 6670650 -196414882 - L1MA6 LINE L1 -11 6289 6111 2221 71 0 0 chr5 6670825 6671093 -196414439 + AluY SINE Alu 29 296 -15 222 37 0 0 chr5 6671106 6671133 -196414399 + (TG)n Simple_repeat Simple_repeat 2 28 0 1568 215 81 39 chr5 6671927 6672410 -196413122 + MLT1D LTR MaLR 1 503 -2 1103 218 100 50 chr5 6673181 6673621 -196411911 - MLT1C LTR MaLR 0 467 6 344 219 14 0 chr5 6673777 6673850 -196411682 - MER20 DNA MER1_type 0 219 146 1709 151 15 4 chr5 6673882 6674154 -196411378 + AluJb SINE Alu 1 275 -37 249 188 0 21 chr5 6675009 6675057 -196410475 + L3 LINE CR1 1526 1572 -5 1500 190 62 60 chr5 6675705 6676169 -196409363 - MLT1C LTR MaLR 0 467 3 864 174 177 119 chr5 6676259 6676357 -196409175 - MLT1A1 LTR MaLR 0 365 274 1673 190 0 29 chr5 6676357 6676667 -196408865 + AluJb SINE Alu 10 310 -2 864 174 177 119 chr5 6676667 6676912 -196408620 - MLT1A1 LTR MaLR -91 274 2 441 129 0 0 chr5 6676983 6677053 -196408479 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 21 0 0 0 chr5 6677879 6677900 -196407632 + AT_rich Low_complexity Low_complexity 1 21 0 304 357 132 0 chr5 6678395 6678622 -196406910 - MIR SINE MIR -1 261 5 214 116 0 47 chr5 6678641 6678684 -196406848 + (TCC)n Simple_repeat Simple_repeat 2 42 0 187 318 82 45 chr5 6678949 6679059 -196406473 + MER5A DNA MER1_type 36 149 -40 209 213 0 0 chr5 6679369 6679416 -196406116 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 1183 162 5 18 chr5 6681219 6681441 -196404091 - MER20 DNA MER1_type 0 219 1 465 203 95 42 chr5 6681722 6681880 -196403652 + MIR SINE MIR 35 201 -61 390 196 52 0 chr5 6682306 6682403 -196403129 - MLT1H1 LTR MaLR 0 555 454 344 88 18 0 chr5 6682566 6682623 -196402909 + (TC)n Simple_repeat Simple_repeat 1 58 0 371 298 105 11 chr5 6682685 6682964 -196402568 - MLT1H1 LTR MaLR -292 263 1 180 336 109 34 chr5 6682967 6683086 -196402446 - MER5A DNA MER1_type -40 149 22 286 232 30 30 chr5 6683171 6683270 -196402262 + Charlie7 DNA MER1_type 131 229 -2383 284 272 35 18 chr5 6683346 6683460 -196402072 + Charlie7 DNA MER1_type 1487 1602 -1010 2782 107 46 7 chr5 6683694 6684152 -196401380 + L1PB1 LINE L1 5676 6151 0 21 0 0 0 chr5 6684256 6684277 -196401255 + AT_rich Low_complexity Low_complexity 1 21 0 751 274 64 24 chr5 6684309 6684526 -196401006 + Charlie7 DNA MER1_type 1942 2149 -463 1820 106 23 0 chr5 6684526 6684782 -196400750 - AluY SINE Alu -11 300 39 751 274 64 24 chr5 6684782 6685141 -196400391 + Charlie7 DNA MER1_type 2149 2612 0 21 0 0 0 chr5 6685473 6685494 -196400038 + AT_rich Low_complexity Low_complexity 1 21 0 909 262 5 0 chr5 6686387 6686601 -196398931 - MER58A DNA MER1_type -9 215 1 24 67 0 0 chr5 6686698 6686743 -196398789 + AT_rich Low_complexity Low_complexity 1 45 0 246 105 0 0 chr5 6687464 6687502 -196398030 + (TG)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr5 6687837 6687861 -196397671 + AT_rich Low_complexity Low_complexity 1 24 0 909 159 5 15 chr5 6688161 6688356 -196397176 - L1MA4 LINE L1 -7 6293 6101 385 110 79 18 chr5 6690062 6690226 -196395306 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1952 236 165 5 chr5 6690511 6691074 -196394458 + MLT1E1 LTR MaLR 1 653 -1 936 204 9 18 chr5 6691078 6691303 -196394229 - MLT1D LTR MaLR 0 505 283 249 257 135 0 chr5 6691343 6691417 -196394115 - MLT1D LTR MaLR -541 85 2 2075 113 39 0 chr5 6692097 6692381 -196393151 + AluSg1 SINE Alu 1 295 -14 829 210 95 5 chr5 6692656 6692856 -196392676 - MER20 DNA MER1_type -1 218 1 327 241 60 0 chr5 6693139 6693222 -196392310 + MIR SINE MIR 125 212 -50 231 297 117 14 chr5 6693707 6693852 -196391680 + MIR3 SINE MIR 26 185 -23 1820 147 124 48 chr5 6694256 6694652 -196390880 - MSTA LTR MaLR -2 426 1 7603 150 5 34 chr5 6694652 6696075 -196389457 - MSTA-int LTR MaLR 0 1580 200 470 231 48 27 chr5 6696086 6696233 -196389299 + LTR49-int LTR ERV1 3058 3207 -3124 29606 100 20 57 chr5 6696234 6702612 -196382920 - L1PA7 LINE L1 -1 6153 12 1016 166 10 5 chr5 6702623 6702822 -196382710 - MSTA-int LTR MaLR -1378 202 3 1813 151 133 21 chr5 6702826 6703209 -196382323 - MSTA LTR MaLR -2 426 1 395 280 10 0 chr5 6703248 6703348 -196382184 - MER58 DNA MER1_type -2310 110 10 2178 226 59 6 chr5 6703787 6704314 -196381218 - MER68 LTR ERV1 -7 555 1 24 32 0 0 chr5 6704461 6704492 -196381040 + AT_rich Low_complexity Low_complexity 1 31 0 265 324 39 10 chr5 6704673 6704775 -196380757 - MIR SINE MIR -105 157 53 21 71 0 0 chr5 6706166 6706208 -196379324 + AT_rich Low_complexity Low_complexity 1 42 0 325 255 33 85 chr5 6706289 6706501 -196379031 - L1MC5 LINE L1 -36 7925 7725 318 375 53 33 chr5 6706544 6706904 -196378628 + L3 LINE CR1 1133 1499 -78 247 261 52 70 chr5 6707103 6707218 -196378314 + MIR SINE MIR 32 144 -118 2000 243 18 6 chr5 6708526 6709037 -196376495 - LTR53 LTR ERVL 0 519 3 221 232 11 63 chr5 6709811 6709906 -196375626 + CT-rich Low_complexity Low_complexity 5 94 0 2103 138 0 53 chr5 6710611 6710967 -196374565 - MER1B DNA MER1_type 0 337 1 198 0 0 0 chr5 6711227 6711249 -196374283 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 31 44 0 0 chr5 6711252 6711297 -196374235 + AT_rich Low_complexity Low_complexity 1 45 0 20403 20 0 0 chr5 6711297 6714582 -196370950 - L1HS LINE L1 0 6155 2871 2276 28 0 0 chr5 6714582 6714870 -196370662 + L1HS LINE L1 2580 2867 -3279 2022 128 6 25 chr5 6715085 6715404 -196370128 + AluSq SINE Alu 1 313 0 365 278 136 6 chr5 6715464 6715633 -196369899 - MIR SINE MIR -24 238 48 1184 331 118 28 chr5 6717449 6718689 -196366843 - L2 LINE L2 0 3313 1954 229 191 0 0 chr5 6720022 6720064 -196365468 + L2 LINE L2 3268 3309 -4 440 284 62 40 chr5 6722180 6722356 -196363176 + MIR SINE MIR 16 195 -67 1094 261 72 19 chr5 6722897 6723273 -196362259 - MSTD LTR MaLR 0 396 1 199 310 60 114 chr5 6724335 6724519 -196361013 + L2 LINE L2 2919 3092 -180 2724 167 39 6 chr5 6724582 6725115 -196360417 - MER34C LTR ERV1 0 585 35 1091 233 93 77 chr5 6725232 6725725 -196359807 - MLT1D LTR MaLR 0 505 5 23 33 0 0 chr5 6728643 6728673 -196356859 + AT_rich Low_complexity Low_complexity 1 30 0 527 165 0 10 chr5 6728819 6728916 -196356616 - Tigger7 DNA MER2_type -2 2585 2490 * 1116 222 44 4 chr5 6728915 6729163 -196356369 - Tigger7 DNA MER2_type -466 267 10 430 283 36 7 chr5 6729512 6729650 -196355882 - L2 LINE L2 -1 3312 3171 409 323 137 20 chr5 6729692 6730029 -196355503 - L2 LINE L2 -276 3037 2664 470 268 168 9 chr5 6730377 6730597 -196354935 + MIR SINE MIR 8 262 0 1456 226 94 5 chr5 6730694 6731118 -196354414 + MLT1C LTR MaLR 6 467 0 1326 156 8 16 chr5 6731433 6731683 -196353849 - L1PB1 LINE L1 -4 6147 5900 255 247 94 12 chr5 6732841 6732926 -196352606 + L2 LINE L2 3220 3311 -2 21 0 0 0 chr5 6733228 6733249 -196352283 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr5 6735892 6735939 -196349593 + AT_rich Low_complexity Low_complexity 1 47 0 300 232 12 24 chr5 6736462 6736544 -196348988 + L1ME4a LINE L1 5856 5936 -185 22 35 0 0 chr5 6736746 6736775 -196348757 + AT_rich Low_complexity Low_complexity 1 29 0 2332 122 34 0 chr5 6738007 6738359 -196347173 + THE1B LTR MaLR 1 364 0 239 228 22 43 chr5 6738368 6738460 -196347072 + CT-rich Low_complexity Low_complexity 4 93 0 290 275 12 0 chr5 6738731 6738811 -196346721 - MER20 DNA MER1_type -1 218 138 229 284 11 49 chr5 6741529 6741712 -196343820 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 2063 128 13 13 chr5 6742710 6743016 -196342516 - AluSx SINE Alu -6 306 1 1787 161 0 49 chr5 6743901 6744225 -196341307 + AluJb SINE Alu 2 309 -3 897 129 7 21 chr5 6745111 6745251 -196340281 + AluJb SINE Alu 1 138 -174 306 291 67 67 chr5 6745491 6745701 -196339831 + L2 LINE L2 2563 2772 -542 218 313 63 115 chr5 6745732 6746157 -196339375 + L2 LINE L2 2868 3270 -2 2470 70 0 0 chr5 6746351 6746651 -196338881 + AluY SINE Alu 1 300 -11 38 0 0 0 chr5 6747192 6747230 -196338302 + AT_rich Low_complexity Low_complexity 1 38 0 30 0 0 0 chr5 6747677 6747707 -196337825 + AT_rich Low_complexity Low_complexity 1 30 0 337 304 58 12 chr5 6748117 6748288 -196337244 - MIR SINE MIR -20 242 64 2145 100 0 42 chr5 6748619 6748930 -196336602 - AluY SINE Alu -11 300 3 349 309 93 27 chr5 6749935 6750194 -196335338 - MLT1L LTR MaLR -10 605 330 180 111 0 0 chr5 6750431 6750458 -196335074 + (CA)n Simple_repeat Simple_repeat 1 27 0 897 220 4 60 chr5 6750583 6750815 -196334717 - MER20 DNA MER1_type 0 219 1 2633 42 0 0 chr5 6752603 6752910 -196332622 + AluY SINE Alu 1 307 -4 288 98 20 0 chr5 6753663 6753714 -196331818 - L1PB2 LINE L1 -1 6150 6099 288 98 20 0 chr5 6753753 6753804 -196331728 - L1PB2 LINE L1 -1 6150 6099 2468 128 5 3 chr5 6753843 6754232 -196331300 - L1PB2 LINE L1 -1 6150 5761 2197 162 13 8 chr5 6754419 6754807 -196330725 - MLT1B LTR MaLR 0 390 1 288 318 86 20 chr5 6755102 6755253 -196330279 + MIR SINE MIR 89 249 -13 288 304 0 38 chr5 6755261 6755340 -196330192 + L2 LINE L2 3197 3272 0 350 176 14 14 chr5 6755901 6755975 -196329557 - MLT1C LTR MaLR 0 467 394 1471 139 0 8 chr5 6755989 6756241 -196329291 - L1PA14 LINE L1 -2 6159 5910 7012 196 20 50 chr5 6756241 6758510 -196327022 + L1PA12 LINE L1 2604 4789 -2795 960 218 150 35 chr5 6758510 6758877 -196326655 - MLT1C LTR MaLR -58 409 1 533 293 131 38 chr5 6760317 6760408 -196325124 + L2 LINE L2 2855 2936 -377 813 275 28 0 chr5 6760408 6760626 -196324906 - MER58A DNA MER1_type 0 224 1 533 293 131 38 chr5 6760626 6760954 -196324578 + L2 LINE L2 2936 3313 0 1945 196 3 8 chr5 6760961 6761328 -196324204 + MLT1A1 LTR MaLR 1 365 0 353 354 39 8 chr5 6761348 6761478 -196324054 + L2 LINE L2 3137 3270 -2 214 303 123 58 chr5 6763405 6763560 -196321972 - MIR SINE MIR -78 184 20 182 345 0 0 chr5 6763747 6763805 -196321727 + L3b LINE CR1 1186 1243 -340 307 304 9 9 chr5 6764237 6764352 -196321180 - MER94 DNA DNA -18 116 2 229 336 78 9 chr5 6766074 6766190 -196319342 - MIR SINE MIR -72 190 67 629 13 13 0 chr5 6766278 6766356 -196319176 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 21 0 0 0 chr5 6766422 6766443 -196319089 + AT_rich Low_complexity Low_complexity 1 21 0 2270 110 3 0 chr5 6766723 6767024 -196318508 + AluSp SINE Alu 1 302 -11 414 0 0 0 chr5 6767073 6767119 -196318413 + (TA)n Simple_repeat Simple_repeat 1 46 0 185 175 25 25 chr5 6767282 6767322 -196318210 - MIR SINE MIR 0 262 223 2126 154 0 40 chr5 6769154 6769505 -196316027 - MER1B DNA MER1_type 0 337 1 607 241 89 11 chr5 6769512 6769723 -196315809 + MIR SINE MIR 36 262 0 180 77 0 0 chr5 6770000 6770026 -196315506 + (TTG)n Simple_repeat Simple_repeat 2 27 0 489 259 9 26 chr5 6773224 6773340 -196312192 - MER81 DNA DNA 0 114 1 216 296 80 0 chr5 6775145 6775233 -196310299 + MIR SINE MIR 51 145 -117 446 311 137 5 chr5 6775766 6775978 -196309554 + MIR SINE MIR 10 249 -13 744 33 0 0 chr5 6776435 6776526 -196309006 + (CA)n Simple_repeat Simple_repeat 2 92 0 219 330 117 10 chr5 6777582 6777685 -196307847 - MIR3 SINE MIR -2 206 93 1124 244 69 41 chr5 6777704 6778068 -196307464 - MLT1A2 LTR MaLR 0 374 1 229 374 80 0 chr5 6778151 6778338 -196307194 - MIR SINE MIR -33 229 28 1576 180 17 20 chr5 6778779 6779079 -196306453 + AluJo SINE Alu 1 299 -13 1945 139 0 0 chr5 6780330 6780633 -196304899 - AluSg1 SINE Alu 0 303 1 204 306 52 60 chr5 6781887 6782021 -196303511 - MIR SINE MIR -50 212 80 265 282 19 19 chr5 6782998 6783101 -196302431 + CT-rich Low_complexity Low_complexity 2 104 0 312 286 40 48 chr5 6784822 6784948 -196300584 - L2 LINE L2 -18 3295 3171 221 294 109 23 chr5 6785136 6785401 -196300131 - L2 LINE L2 -1325 1989 1702 1747 171 48 25 chr5 6785843 6786199 -196299333 - MLT1A1 LTR MaLR 0 365 2 953 207 76 11 chr5 6787237 6787512 -196298020 + L1MA4 LINE L1 6005 6297 -3 510 149 184 0 chr5 6788502 6788616 -196296916 + L1MB7 LINE L1 6049 6183 -1 1585 218 0 0 chr5 6788976 6789274 -196296258 + AluJo SINE Alu 1 298 -14 569 329 62 26 chr5 6789649 6790071 -196295461 + HAL1b LINE L1 83 519 -829 234 328 46 36 chr5 6791222 6791417 -196294115 - L2 LINE L2 -493 2821 2625 545 226 123 64 chr5 6791606 6791810 -196293722 + MER106A DNA MER1_type 21 236 0 195 317 59 10 chr5 6791820 6791921 -196293611 - L2 LINE L2 -778 2536 2431 216 264 170 50 chr5 6791976 6792135 -196293397 - L2 LINE L2 -59 3254 3077 1562 227 66 37 chr5 6793909 6794363 -196291169 + MLT1C LTR MaLR 1 467 0 1966 125 10 16 chr5 6795577 6795889 -196289643 + AluSg SINE Alu 1 310 0 1992 244 58 70 chr5 6797618 6798275 -196287257 - MLT1E1 LTR MaLR 0 654 6 2024 177 28 14 chr5 6800485 6800841 -196284691 + MLT1A1 LTR MaLR 1 361 -4 180 0 0 0 chr5 6800904 6800924 -196284608 + (A)n Simple_repeat Simple_repeat 1 20 0 1703 195 22 30 chr5 6803378 6803742 -196281790 - MLT1A1 LTR MaLR 0 365 5 1133 162 11 109 chr5 6804888 6805172 -196280360 - L1MA9 LINE L1 -25 6287 6032 207 262 24 60 chr5 6805875 6805959 -196279573 + MER5B DNA MER1_type 27 107 -71 248 302 171 24 chr5 6807703 6807908 -196277624 - MIR SINE MIR 0 262 28 281 218 30 99 chr5 6807929 6808030 -196277502 - L2 LINE L2 -24 3289 3196 439 116 40 36 chr5 6809883 6810187 -196275345 + (TA)n Simple_repeat Simple_repeat 1 305 0 2239 167 24 0 chr5 6810206 6810578 -196274954 - MLT1B LTR MaLR -9 381 1 228 277 116 9 chr5 6811303 6811415 -196274117 + MIR3 SINE MIR 84 207 -1 410 180 22 0 chr5 6811586 6811675 -196273857 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 265 328 50 17 chr5 6812108 6812227 -196273305 + MIR3 SINE MIR 36 158 -50 886 176 99 43 chr5 6812413 6812715 -196272817 + MER33 DNA MER1_type 5 323 -1 22 0 0 0 chr5 6813401 6813423 -196272109 + AT_rich Low_complexity Low_complexity 1 22 0 5574 81 7 19 chr5 6813857 6814611 -196270921 - L1PA8A LINE L1 0 6131 5387 790 147 159 0 chr5 6814986 6815149 -196270383 + MER53 DNA DNA 1 189 0 243 348 70 21 chr5 6815949 6816136 -196269396 - L2 LINE L2 -1 3312 3117 362 314 80 7 chr5 6819125 6819262 -196266270 - MER5B DNA MER1_type -3 175 29 447 68 0 0 chr5 6819904 6819923 -196265609 + (CA)n Simple_repeat Simple_repeat 1 78 0 447 68 0 0 chr5 6819923 6819982 -196265550 + (CA)n Simple_repeat Simple_repeat 2 60 0 2174 133 0 0 chr5 6819994 6820295 -196265237 - AluSx SINE Alu -11 301 1 347 285 76 83 chr5 6820418 6821033 -196264499 + L1ME4a LINE L1 5468 6078 -43 910 286 84 23 chr5 6821397 6821893 -196263639 + L2 LINE L2 2723 3253 -60 1540 53 5 0 chr5 6822034 6822224 -196263308 + AluY SINE Alu 116 306 -5 1510 180 92 30 chr5 6822455 6822855 -196262677 - MER69 DNA AcHobo -13 2513 2089 586 274 95 21 chr5 6823675 6824202 -196261330 - L1M4c LINE L1 -4069 2577 1926 1836 154 4 4 chr5 6824207 6824487 -196261045 - AluJb SINE Alu -19 293 14 1916 139 17 46 chr5 6824487 6824832 -196260700 - THE1B LTR MaLR 0 364 30 6668 207 24 77 chr5 6824868 6826917 -196258615 - L1M4c LINE L1 -4712 1934 5 396 40 0 0 chr5 6827128 6827178 -196258354 + (TG)n Simple_repeat Simple_repeat 1 50 0 600 263 53 13 chr5 6827242 6827394 -196258138 + MER5A DNA MER1_type 32 189 0 571 294 82 77 chr5 6827834 6828628 -196256904 - L1M4 LINE L1 -1322 4824 4027 23 33 0 0 chr5 6828798 6828828 -196256704 + AT_rich Low_complexity Low_complexity 1 30 0 557 280 116 57 chr5 6829011 6829589 -196255943 + L1MC4a LINE L1 5293 5904 -1904 428 279 38 25 chr5 6829979 6830137 -196255395 - LTR67 LTR ERVL -369 188 29 2282 112 0 0 chr5 6830394 6830689 -196254843 - AluSx SINE Alu -17 295 1 212 289 134 35 chr5 6830886 6831028 -196254504 - MIR3 SINE MIR -23 185 30 305 266 164 83 chr5 6831349 6831579 -196253953 + L2 LINE L2 2694 2904 -409 2525 193 74 55 chr5 6831579 6832122 -196253410 - MLT2B3 LTR ERVL 0 554 2 305 266 164 83 chr5 6832122 6832282 -196253250 + L2 LINE L2 2904 3116 -197 375 188 83 21 chr5 6834062 6834158 -196251374 + LTR16A1 LTR ERVL 5 106 -351 1956 158 78 45 chr5 6834203 6834421 -196251111 - MLT1B LTR MaLR -4 386 150 2243 115 3 0 chr5 6834421 6834726 -196250806 - AluSx SINE Alu -2 310 5 1956 158 78 45 chr5 6834726 6834881 -196250651 - MLT1B LTR MaLR -240 150 1 444 19 0 0 chr5 6834892 6834945 -196250587 + (T)n Simple_repeat Simple_repeat 1 53 0 2233 203 65 15 chr5 6835473 6835951 -196249581 + MLT1D LTR MaLR 1 502 -3 1156 199 5 23 chr5 6836221 6836442 -196249090 - MER58A DNA MER1_type -2 222 6 299 180 66 0 chr5 6838006 6838067 -196247465 + L1MA9 LINE L1 6243 6307 -5 1258 144 0 33 chr5 6838857 6839072 -196246460 + L1MA9 LINE L1 6100 6307 -5 330 293 14 21 chr5 6839518 6839658 -196245874 + GA-rich Low_complexity Low_complexity 3 141 0 253 286 0 0 chr5 6839836 6839913 -196245619 - L2 LINE L2 -2 3311 3235 238 246 15 0 chr5 6840694 6840759 -196244773 + L1MB4 LINE L1 6115 6180 0 2924 139 21 25 chr5 6842049 6842532 -196243000 + MER31A LTR ERV1 1 481 -4 791 180 12 66 chr5 6842541 6842708 -196242824 - AluJ SINE Alu -25 287 130 739 145 0 90 chr5 6842712 6842857 -196242675 - AluJ SINE Alu -169 133 2 392 89 69 0 chr5 6842876 6842977 -196242555 + (TA)n Simple_repeat Simple_repeat 1 108 0 275 227 53 0 chr5 6842982 6843057 -196242475 + 7SK RNA RNA 15 93 -100 1702 243 165 45 chr5 6843932 6844559 -196240973 - L1ME3A LINE L1 -5 6165 5615 5344 78 0 0 chr5 6844559 6845222 -196240310 - L1PA8 LINE L1 -7 6165 5503 1702 243 165 45 chr5 6845222 6845864 -196239668 - L1ME3A LINE L1 -555 5615 4742 22 0 0 0 chr5 6846060 6846082 -196239450 + AT_rich Low_complexity Low_complexity 1 22 0 1814 157 17 0 chr5 6846088 6846213 -196239319 + AluJb SINE Alu 4 125 -187 2203 102 3 3 chr5 6846213 6846507 -196239025 + AluSc SINE Alu 1 294 -15 1814 157 17 0 chr5 6846507 6846668 -196238864 + AluJb SINE Alu 125 295 -17 2011 135 3 3 chr5 6847905 6848202 -196237330 - AluSq SINE Alu -15 298 2 586 267 85 6 chr5 6848812 6848988 -196236544 - MIR SINE MIR -55 207 18 19935 34 10 3 chr5 6849653 6852716 -196232816 + L1PA10 LINE L1 3100 6168 0 9325 187 19 56 chr5 6852718 6854532 -196231000 + L1MC3 LINE L1 5744 7470 -315 1932 123 3 34 chr5 6854532 6854825 -196230707 + AluSx SINE Alu 1 284 -28 9325 187 19 56 chr5 6854825 6855130 -196230402 + L1MC3 LINE L1 7470 7785 0 426 255 176 7 chr5 6855519 6855672 -196229860 + MER5A DNA MER1_type 4 182 -7 253 319 12 30 chr5 6906411 6906577 -196178955 + CT-rich Low_complexity Low_complexity 2 164 0 321 242 0 53 chr5 6906703 6906798 -196178734 - L1MC4 LINE L1 -1339 6703 6614 267 103 0 0 chr5 6906798 6906837 -196178695 + (CA)n Simple_repeat Simple_repeat 2 40 0 251 328 50 17 chr5 6907266 6907385 -196178147 + MIR3 SINE MIR 36 158 -50 834 176 99 43 chr5 6907571 6907873 -196177659 + MER33 DNA MER1_type 5 323 -1 5507 78 5 19 chr5 6909014 6909769 -196175763 - L1PA8A LINE L1 0 6131 5387 689 134 204 0 chr5 6910144 6910301 -196175231 + MER53 DNA DNA 1 189 0 21 0 0 0 chr5 6911380 6911401 -196174131 + AT_rich Low_complexity Low_complexity 1 21 0 256 247 94 12 chr5 6911703 6911788 -196173744 - L2 LINE L2 -2 3311 3220 1359 152 8 16 chr5 6912947 6913197 -196172335 + L1PB1 LINE L1 5900 6147 -4 1586 226 94 5 chr5 6913512 6913936 -196171596 - MLT1C LTR MaLR 0 467 6 483 264 168 9 chr5 6914033 6914253 -196171279 - MIR SINE MIR 0 262 8 389 323 137 20 chr5 6914601 6914938 -196170594 + L2 LINE L2 2664 3037 -276 423 283 36 7 chr5 6914980 6915118 -196170414 + L2 LINE L2 3171 3312 -1 1199 222 44 4 chr5 6915467 6915715 -196169817 + Tigger7 DNA MER2_type 10 267 -466 562 165 0 10 chr5 6915714 6915811 -196169721 + Tigger7 DNA MER2_type 2390 2485 -2 * 23 33 0 0 chr5 6915957 6915987 -196169545 + AT_rich Low_complexity Low_complexity 1 30 0 33 43 0 0 chr5 6919119 6919166 -196166366 + AT_rich Low_complexity Low_complexity 1 47 0 239 174 14 29 chr5 6919702 6919771 -196165761 + L1ME4a LINE L1 5869 5936 -185 22 35 0 0 chr5 6919973 6920002 -196165530 + AT_rich Low_complexity Low_complexity 1 29 0 2353 125 31 0 chr5 6921234 6921587 -196163945 + THE1B LTR MaLR 1 364 0 223 239 22 43 chr5 6921596 6921688 -196163844 + CT-rich Low_complexity Low_complexity 4 93 0 310 275 12 0 chr5 6921959 6922039 -196163493 - MER20 DNA MER1_type -1 218 138 21 71 0 0 chr5 6924200 6924242 -196161290 + AT_rich Low_complexity Low_complexity 1 42 0 375 255 33 85 chr5 6924323 6924535 -196160997 - L1MC5 LINE L1 -36 7925 7725 309 375 53 33 chr5 6924578 6924938 -196160594 + L3 LINE CR1 1133 1499 -78 239 261 52 70 chr5 6925137 6925252 -196160280 + MIR SINE MIR 32 144 -118 2212 247 18 6 chr5 6926560 6927071 -196158461 - LTR53 LTR ERVL 0 519 3 221 232 11 63 chr5 6927845 6927940 -196157592 + CT-rich Low_complexity Low_complexity 5 94 0 2246 140 0 53 chr5 6928645 6929001 -196156531 - MER1B DNA MER1_type 0 337 1 198 0 0 0 chr5 6929261 6929283 -196156249 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 31 44 0 0 chr5 6929286 6929331 -196156201 + AT_rich Low_complexity Low_complexity 1 45 0 10139 20 6 0 chr5 6929331 6931314 -196154218 - L1HS LINE L1 -1 6154 4159 1292 234 93 75 chr5 6932447 6932939 -196152593 + MLT1D LTR MaLR 5 505 0 2987 167 39 6 chr5 6933056 6933589 -196151943 + MER34C LTR ERV1 35 585 0 199 304 60 114 chr5 6933652 6933836 -196151696 - L2 LINE L2 -180 3092 2919 1266 258 72 19 chr5 6934898 6935274 -196150258 + MSTD LTR MaLR 1 396 0 432 284 62 40 chr5 6935816 6935992 -196149540 - MIR SINE MIR -67 195 16 225 191 0 0 chr5 6938108 6938150 -196147382 - L2 LINE L2 -4 3309 3268 1087 326 121 31 chr5 6939485 6940724 -196144808 + L2 LINE L2 1954 3313 0 377 273 36 7 chr5 6942570 6942709 -196142823 + MIR SINE MIR 96 238 -24 2012 121 6 34 chr5 6942765 6943087 -196142445 - AluSq SINE Alu 0 313 1 2428 71 6 5 chr5 6943255 6943597 -196141935 - L1P LINE L1 -3230 2916 2573 * 11205 26 0 0 chr5 6943590 6944893 -196140639 + L1P LINE L1 2871 4173 -1973 190 237 34 34 chr5 6945011 6945070 -196140462 - MIR SINE MIR -66 142 84 2226 169 24 0 chr5 6945791 6946163 -196139369 + MLT1B LTR MaLR 1 381 -9 443 123 34 37 chr5 6946189 6946517 -196139015 + (TA)n Simple_repeat Simple_repeat 1 327 0 281 218 30 99 chr5 6948370 6948471 -196137061 + L2 LINE L2 3196 3289 -24 248 302 171 24 chr5 6948492 6948697 -196136835 + MIR SINE MIR 28 262 0 207 262 24 60 chr5 6950441 6950525 -196135007 - MER5B DNA MER1_type -71 107 27 1133 162 11 109 chr5 6951228 6951512 -196134020 + L1MA9 LINE L1 6032 6287 -25 1724 192 22 30 chr5 6952658 6953022 -196132510 + MLT1A1 LTR MaLR 5 365 0 189 0 0 0 chr5 6955477 6955498 -196130034 + (T)n Simple_repeat Simple_repeat 1 21 0 2024 177 28 14 chr5 6955561 6955917 -196129615 - MLT1A1 LTR MaLR -4 361 1 1967 245 58 70 chr5 6958127 6958784 -196126748 + MLT1E1 LTR MaLR 6 654 0 1966 125 10 16 chr5 6960514 6960826 -196124706 - AluSg SINE Alu 0 310 1 1562 227 66 37 chr5 6962040 6962494 -196123038 - MLT1C LTR MaLR 0 467 1 247 332 75 27 chr5 6964168 6964355 -196121177 - L2 LINE L2 -1 3312 3117 362 314 80 7 chr5 6967344 6967481 -196118051 - MER5B DNA MER1_type -3 175 29 365 215 11 0 chr5 6968123 6968216 -196117316 + (TA)n Simple_repeat Simple_repeat 1 94 0 2067 136 0 7 chr5 6968216 6968518 -196117014 - AluSx SINE Alu -12 300 1 2176 112 14 3 chr5 6969198 6969493 -196116039 - AluSx SINE Alu -14 298 1 244 272 37 88 chr5 6971159 6971295 -196114237 - MIR SINE MIR -88 174 46 748 200 8 0 chr5 6972145 6972270 -196113262 + FLAM_C SINE Alu 2 127 -16 2180 130 3 0 chr5 6972614 6972921 -196112611 - AluSx SINE Alu -4 308 1 584 212 66 7 chr5 6972975 6973112 -196112420 - MER58B DNA MER1_type -5 336 192 1274 268 89 37 chr5 6973113 6973263 -196112269 - REP3 LTR ERV -26 536 395 2154 114 0 0 chr5 6973263 6973570 -196111962 + AluSx SINE Alu 1 307 0 1274 268 89 37 chr5 6973570 6973903 -196111629 - REP3 LTR ERV -167 395 27 206 118 0 0 chr5 6974540 6974574 -196110958 + (T)n Simple_repeat Simple_repeat 1 34 0 1858 126 70 0 chr5 6974713 6974999 -196110533 + AluSg SINE Alu 1 306 -4 204 418 27 0 chr5 6975489 6975599 -196109933 - L2 LINE L2 -17 3255 3143 2023 132 13 20 chr5 6976338 6976641 -196108891 + AluSx SINE Alu 1 301 -11 199 250 42 0 chr5 6976930 6976978 -196108554 + MIR SINE MIR 82 131 -131 201 273 0 0 chr5 6977208 6977263 -196108269 + A-rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 6978804 6978826 -196106706 + AT_rich Low_complexity Low_complexity 1 22 0 203 258 65 0 chr5 6979135 6979197 -196106335 - MIR SINE MIR -73 189 124 1499 165 68 11 chr5 6979308 6979598 -196105934 - AluSx SINE Alu 0 305 1 357 297 84 86 chr5 6979868 6980286 -196105246 + L2 LINE L2 2848 3264 -8 404 145 0 0 chr5 6980866 6980935 -196104597 - L1MA7 LINE L1 -30 6261 6193 21 0 0 0 chr5 6982070 6982091 -196103441 + AT_rich Low_complexity Low_complexity 1 21 0 4482 97 24 14 chr5 6983046 6983674 -196101858 + L1PB1 LINE L1 5517 6150 -1 292 314 51 19 chr5 6983707 6983863 -196101669 + L1MC4a LINE L1 5765 5925 -1883 219 273 0 0 chr5 6983914 6983969 -196101563 + (TA)n Simple_repeat Simple_repeat 1 55 0 241 303 55 85 chr5 6984286 6984451 -196101081 + MIR SINE MIR 77 236 -26 229 284 11 49 chr5 6986635 6986818 -196098714 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 2061 129 13 13 chr5 6987816 6988126 -196097406 - AluSx SINE Alu -2 310 1 1739 164 0 46 chr5 6989087 6989410 -196096122 + AluJo SINE Alu 2 309 -3 906 121 7 21 chr5 6990296 6990436 -196095096 + AluJb SINE Alu 1 138 -174 301 291 67 67 chr5 6990676 6990886 -196094646 + L2 LINE L2 2563 2772 -542 218 313 66 118 chr5 6990917 6991342 -196094190 + L2 LINE L2 2868 3270 -2 2502 67 0 0 chr5 6991536 6991834 -196093698 + AluY SINE Alu 1 298 -13 36 0 0 0 chr5 6992375 6992411 -196093121 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 6992858 6992888 -196092644 + AT_rich Low_complexity Low_complexity 1 30 0 346 304 58 12 chr5 6993296 6993467 -196092065 - MIR SINE MIR -20 242 64 2118 99 0 51 chr5 6993798 6994111 -196091421 - AluY SINE Alu -12 299 3 442 309 93 27 chr5 6995116 6995375 -196090157 - MLT1L LTR MaLR -10 605 330 180 111 0 0 chr5 6995611 6995638 -196089894 + (CA)n Simple_repeat Simple_repeat 1 27 0 989 207 9 65 chr5 6995763 6995995 -196089537 - MER20 DNA MER1_type 0 219 1 2746 29 0 0 chr5 6997784 6998091 -196087441 + AluY SINE Alu 1 307 -4 323 98 20 0 chr5 6998844 6998895 -196086637 - L1PB2 LINE L1 -1 6150 6099 323 98 20 0 chr5 6998934 6998985 -196086547 - L1PB2 LINE L1 -1 6150 6099 2666 128 5 3 chr5 6999024 6999413 -196086119 - L1PB2 LINE L1 -1 6150 5761 2361 162 13 10 chr5 6999600 6999989 -196085543 - MLT1B LTR MaLR 0 390 1 282 318 86 20 chr5 7000284 7000435 -196085097 + MIR SINE MIR 89 249 -13 283 304 0 38 chr5 7000443 7000522 -196085010 + L2 LINE L2 3197 3272 0 386 176 14 14 chr5 7001083 7001157 -196084375 - MLT1C LTR MaLR 0 467 394 7832 195 20 50 chr5 7001160 7001171 -196084361 + L1PA12 LINE L1 2593 2603 -4981 1593 139 0 8 chr5 7001171 7001423 -196084109 - L1PA14 LINE L1 -2 6159 5910 7832 195 20 50 chr5 7001423 7003685 -196081847 + L1PA12 LINE L1 2603 4782 -2802 1117 217 147 37 chr5 7003685 7004059 -196081473 - MLT1C LTR MaLR -52 415 1 566 284 137 34 chr5 7005531 7005590 -196079942 + L2 LINE L2 2886 2938 -375 899 275 28 0 chr5 7005590 7005808 -196079724 - MER58A DNA MER1_type 0 224 1 566 284 137 34 chr5 7005808 7006136 -196079396 + L2 LINE L2 2938 3313 0 2145 194 3 8 chr5 7006143 7006510 -196079022 + MLT1A1 LTR MaLR 1 365 0 344 354 39 8 chr5 7006530 7006660 -196078872 + L2 LINE L2 3137 3270 -2 216 303 123 58 chr5 7008588 7008743 -196076789 - MIR SINE MIR -78 184 20 349 304 9 9 chr5 7009420 7009535 -196075997 - MER94 DNA DNA -18 116 2 215 336 78 9 chr5 7011257 7011373 -196074159 - MIR SINE MIR -72 190 67 593 14 14 0 chr5 7011461 7011535 -196073997 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 21 0 0 0 chr5 7011601 7011622 -196073910 + AT_rich Low_complexity Low_complexity 1 21 0 2268 110 3 0 chr5 7011902 7012203 -196073329 + AluSp SINE Alu 1 302 -11 288 0 0 0 chr5 7012252 7012284 -196073248 + (TA)n Simple_repeat Simple_repeat 1 32 0 185 175 25 25 chr5 7012447 7012487 -196073045 - MIR SINE MIR 0 262 223 2267 157 0 40 chr5 7014321 7014672 -196070860 - MER1B DNA MER1_type 0 337 1 600 241 89 11 chr5 7014679 7014890 -196070642 + MIR SINE MIR 36 262 0 180 77 0 0 chr5 7015167 7015193 -196070339 + (TTG)n Simple_repeat Simple_repeat 2 27 0 489 259 9 26 chr5 7018391 7018507 -196067025 - MER81 DNA DNA 0 114 1 216 296 80 0 chr5 7020312 7020400 -196065132 + MIR SINE MIR 51 145 -117 446 311 137 5 chr5 7020933 7021145 -196064387 + MIR SINE MIR 10 249 -13 516 16 0 0 chr5 7021602 7021663 -196063869 + (CA)n Simple_repeat Simple_repeat 2 62 0 219 330 117 10 chr5 7022719 7022822 -196062710 - MIR3 SINE MIR -2 206 93 1124 244 69 41 chr5 7022841 7023205 -196062327 - MLT1A2 LTR MaLR 0 374 1 229 374 80 0 chr5 7023288 7023475 -196062057 - MIR SINE MIR -33 229 28 1603 177 17 20 chr5 7023916 7024216 -196061316 + AluJo SINE Alu 1 299 -13 1960 136 0 0 chr5 7025467 7025770 -196059762 - AluSg1 SINE Alu 0 303 1 208 259 46 74 chr5 7027025 7027133 -196058399 - MIR SINE MIR -50 212 108 265 282 19 19 chr5 7028179 7028282 -196057250 + CT-rich Low_complexity Low_complexity 2 104 0 307 294 40 48 chr5 7030006 7030132 -196055400 - L2 LINE L2 -18 3295 3171 209 306 106 19 chr5 7030321 7030586 -196054946 - L2 LINE L2 -1325 1989 1702 1586 174 48 25 chr5 7031028 7031384 -196054148 - MLT1A1 LTR MaLR 0 365 2 828 207 76 11 chr5 7032432 7032707 -196052825 + L1MA4 LINE L1 6005 6297 -3 299 175 32 0 chr5 7033697 7033760 -196051772 + L1MB7 LINE L1 6049 6113 -71 311 267 0 0 chr5 7034234 7034309 -196051223 + MIR SINE MIR 78 152 -110 2595 52 0 3 chr5 7035948 7036253 -196049279 + AluY SINE Alu 1 304 -7 1795 174 3 25 chr5 7036981 7037228 -196048304 + AluJo SINE Alu 1 241 -71 1793 155 64 25 chr5 7037228 7037589 -196047943 - THE1C LTR MaLR 0 375 1 1795 174 3 25 chr5 7037589 7037657 -196047875 + AluJo SINE Alu 241 309 -3 281 298 78 7 chr5 7038306 7038447 -196047085 - MER104 DNA Tc2 -1 179 29 788 227 146 57 chr5 7038808 7039143 -196046389 - MLT1A1 LTR MaLR 0 365 1 1700 183 59 67 chr5 7039599 7039791 -196045741 + MSTB LTR MaLR 4 196 -230 2475 77 0 0 chr5 7039791 7040102 -196045430 - AluY SINE Alu 0 311 1 1700 183 59 67 chr5 7040102 7040330 -196045202 + MSTB LTR MaLR 196 421 -5 322 370 19 19 chr5 7040761 7040923 -196044609 - MIR SINE MIR -32 230 69 516 244 161 0 chr5 7041476 7041681 -196043851 + MIR SINE MIR 13 250 -12 1089 157 52 9 chr5 7042419 7042629 -196042903 + MER20 DNA MER1_type 1 219 0 633 255 57 38 chr5 7042931 7043194 -196042338 - MLT1L LTR MaLR -221 394 127 181 390 26 0 chr5 7043587 7043664 -196041868 - MIR3 SINE MIR -21 187 109 1295 156 22 6 chr5 7043780 7044167 -196041365 - LTR47B LTR ERVL 0 443 1 317 236 46 50 chr5 7044198 7044370 -196041162 + MER87 LTR ERV1 1 146 -395 547 260 91 57 chr5 7044527 7044927 -196040605 + LTR8A LTR ERV1 280 603 -19 1925 115 0 17 chr5 7045823 7046110 -196039422 + L1PA8 LINE L1 5891 6172 0 2137 119 3 0 chr5 7046677 7046963 -196038569 + AluSx SINE Alu 1 287 -25 384 209 0 0 chr5 7047946 7048032 -196037500 + CT-rich Low_complexity Low_complexity 2 87 0 2340 69 3 16 chr5 7048135 7048439 -196037093 - AluY SINE Alu -11 300 1 22 0 0 0 chr5 7049279 7049301 -196036231 + AT_rich Low_complexity Low_complexity 1 22 0 2155 105 7 0 chr5 7050335 7050629 -196034903 + AluSx SINE Alu 1 296 -16 28 71 0 0 chr5 7050739 7050795 -196034737 + AT_rich Low_complexity Low_complexity 1 56 0 27 73 0 0 chr5 7051028 7051083 -196034449 + AT_rich Low_complexity Low_complexity 1 55 0 26 50 0 0 chr5 7051295 7051335 -196034197 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 7051457 7051479 -196034053 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 7051488 7051514 -196034018 + AT_rich Low_complexity Low_complexity 1 26 0 1836 168 22 11 chr5 7053686 7054043 -196031489 + MER46B DNA MER2_type 1 236 0 1981 246 78 25 chr5 7055107 7055668 -196029864 - MLT1E LTR MaLR 0 593 3 404 298 56 120 chr5 7055677 7056396 -196029136 - MLT1E-int LTR MaLR -7 1364 692 713 277 62 10 chr5 7056614 7056903 -196028629 - MLT1E-int LTR MaLR -755 616 313 3675 180 28 25 chr5 7056953 7057810 -196027722 - L1MB4 LINE L1 -25 6155 5296 488 181 23 38 chr5 7057830 7057963 -196027569 - L1MA8 LINE L1 -19 6272 6142 434 278 43 16 chr5 7057996 7058183 -196027349 - MLT1E-int LTR MaLR -1174 197 6 1750 253 104 8 chr5 7058197 7058718 -196026814 - MLT1E LTR MaLR -15 578 8 2750 13 0 22 chr5 7062075 7062391 -196023141 + AluYa5 SINE Alu 1 309 -2 27 29 0 0 chr5 7064662 7064696 -196020836 + AT_rich Low_complexity Low_complexity 1 34 0 196 237 219 18 chr5 7066288 7066402 -196019130 + MIR3 SINE MIR 12 148 -60 446 350 23 18 chr5 7067086 7067303 -196018229 - MIR SINE MIR -6 256 39 21 57 0 0 chr5 7068814 7068849 -196016683 + AT_rich Low_complexity Low_complexity 1 35 0 331 315 8 24 chr5 7069937 7070064 -196015468 - MIR SINE MIR -26 236 112 344 221 87 29 chr5 7070475 7070579 -196014953 + MER91C DNA MER1_type 8 117 -23 1902 149 22 0 chr5 7073137 7073455 -196012077 - AluSx SINE Alu 0 324 1 344 266 31 16 chr5 7074342 7074470 -196011062 - L1MA9 LINE L1 -38 6274 6145 996 190 20 0 chr5 7074491 7074769 -196010763 - L1M3 LINE L1 -693 5475 5193 1324 212 47 30 chr5 7074769 7074821 -196010711 + L1MA9 LINE L1 5731 5781 -531 369 0 0 0 chr5 7074821 7074862 -196010670 + (CA)n Simple_repeat Simple_repeat 2 42 0 1324 212 47 30 chr5 7074862 7075210 -196010322 + L1MA9 LINE L1 5781 6138 -174 1317 197 18 0 chr5 7075204 7075478 -196010054 + L1M2 LINE L1 5452 5730 -582 * 400 219 202 0 chr5 7076133 7076316 -196009216 + MIR SINE MIR 13 232 -30 2025 81 3 14 chr5 7076858 7077142 -196008390 - L1PA7 LINE L1 -1 6153 5873 2108 112 47 0 chr5 7078546 7078842 -196006690 - AluSg SINE Alu 0 310 1 283 326 10 0 chr5 7081527 7081625 -196003907 + L2 LINE L2 3200 3298 -15 347 294 70 80 chr5 7082013 7082200 -196003332 - MER91A DNA MER1_type 0 196 12 671 284 15 61 chr5 7082326 7082653 -196002879 + L1M4 LINE L1 3854 4165 -1981 206 323 71 55 chr5 7083077 7083204 -196002328 - L2 LINE L2 -21 3251 3123 189 0 0 0 chr5 7083613 7083634 -196001898 + (TA)n Simple_repeat Simple_repeat 1 21 0 2095 98 9 67 chr5 7083932 7084260 -196001272 - AluSc SINE Alu 0 309 1 207 188 0 0 chr5 7084694 7084742 -196000790 + A-rich Low_complexity Low_complexity 2 49 0 296 100 0 0 chr5 7085616 7085656 -195999876 - THE1B LTR MaLR 0 355 316 1324 125 64 53 chr5 7085764 7086048 -195999484 - THE1B LTR MaLR -91 284 1 12469 92 14 0 chr5 7086049 7087607 -195997925 - THE1B-int LTR MaLR -1 1579 1 2388 136 43 14 chr5 7087609 7087961 -195997571 - THE1B LTR MaLR -2 362 1 387 60 0 0 chr5 7088696 7088746 -195996786 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 265 294 50 17 chr5 7089621 7089740 -195995792 - MIR SINE MIR -37 225 103 261 219 0 0 chr5 7090839 7090912 -195994620 + (TA)n Simple_repeat Simple_repeat 1 73 0 1386 258 119 39 chr5 7090916 7091454 -195994078 - MLT1E LTR MaLR 0 593 13 7180 63 30 47 chr5 7091765 7092811 -195992721 - L1PA7 LINE L1 0 6154 5108 2449 95 0 11 chr5 7092812 7093161 -195992371 - L1PA7 LINE L1 -3063 3083 2739 207 157 20 20 chr5 7093283 7093334 -195992198 + T-rich Low_complexity Low_complexity 2 52 0 225 0 0 0 chr5 7093707 7093732 -195991800 + (TG)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr5 7095410 7095451 -195990081 + (CA)n Simple_repeat Simple_repeat 2 42 0 1401 184 20 13 chr5 7095692 7096086 -195989446 - L1MA4A LINE L1 -23 6280 5823 2453 89 0 0 chr5 7096092 7096395 -195989137 - AluSc SINE Alu -6 303 1 1868 245 47 38 chr5 7096478 7097111 -195988421 - L1ME1 LINE L1 -5 6230 5592 4568 242 107 31 chr5 7097503 7099280 -195986252 - L1ME1 LINE L1 -757 5458 3656 2550 278 49 35 chr5 7099297 7100245 -195985287 - L1ME1 LINE L1 -4925 965 38 2375 96 0 0 chr5 7101928 7102231 -195983301 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 7102716 7102737 -195982795 + AT_rich Low_complexity Low_complexity 1 21 0 2520 225 23 8 chr5 7103029 7103549 -195981983 + MER68 LTR ERV1 35 562 0 1814 280 88 53 chr5 7103560 7104633 -195980899 + HAL1 LINE L1 241 1351 -1156 225 0 0 0 chr5 7104714 7104739 -195980793 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 193 370 65 7 chr5 7106421 7106559 -195978973 + MIR SINE MIR 1 146 -116 526 146 73 0 chr5 7107565 7107661 -195977871 - AluJb SINE Alu -2 310 208 2431 99 3 3 chr5 7107661 7107994 -195977538 - L1PA7 LINE L1 -147 6007 5675 1491 215 18 0 chr5 7109558 7109865 -195975667 + AluJo SINE Alu 1 312 0 381 211 96 29 chr5 7110153 7110257 -195975275 + ORSL DNA AcHobo 164 274 -1 282 238 12 36 chr5 7110872 7110956 -195974576 + L2 LINE L2 3200 3281 -32 210 189 19 19 chr5 7111484 7111537 -195973995 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 1937 173 0 0 chr5 7112469 7112770 -195972762 + AluSx SINE Alu 1 301 -11 279 59 0 0 chr5 7113103 7113151 -195972381 + L1PA2 LINE L1 6113 6155 0 21 71 0 0 chr5 7114124 7114166 -195971366 + AT_rich Low_complexity Low_complexity 1 42 0 4864 152 10 12 chr5 7115017 7115580 -195969952 - L1MB1 LINE L1 0 6168 5606 1897 154 3 0 chr5 7115580 7115879 -195969653 - AluSx SINE Alu -12 300 1 4864 152 10 12 chr5 7115879 7116125 -195969407 - L1MB1 LINE L1 -562 5606 5361 24 0 0 0 chr5 7116425 7116449 -195969083 + AT_rich Low_complexity Low_complexity 1 24 0 656 257 27 16 chr5 7122090 7122277 -195963255 + MER5A DNA MER1_type 1 189 0 1809 146 3 14 chr5 7122853 7123166 -195962366 + AluSx SINE Alu 1 310 0 219 36 0 0 chr5 7123219 7123247 -195962285 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 192 279 9 90 chr5 7123503 7123614 -195961918 - MIR SINE MIR -8 254 153 312 324 28 34 chr5 7123616 7123795 -195961737 - MER46C DNA MER2_type -2 336 159 257 255 10 88 chr5 7123959 7124061 -195961471 - MIR SINE MIR -65 143 50 2152 113 3 3 chr5 7127235 7127539 -195957993 + AluSp SINE Alu 2 305 0 311 193 12 0 chr5 7132087 7132170 -195953362 + CT-rich Low_complexity Low_complexity 4 87 0 2098 134 3 3 chr5 7133291 7133597 -195951935 + AluJb SINE Alu 1 306 -6 189 0 0 0 chr5 7136333 7136354 -195949178 + (T)n Simple_repeat Simple_repeat 1 21 0 301 185 99 12 chr5 7137779 7137860 -195947672 - L1MCa LINE L1 -4362 2064 1977 189 0 0 0 chr5 7142178 7142199 -195943333 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2862 224 44 6 chr5 7142816 7143612 -195941920 - L1MB7 LINE L1 -42 6142 5317 800 84 34 0 chr5 7143606 7143725 -195941807 + L1PA16 LINE L1 1 123 -6726 * 2109 141 35 16 chr5 7143725 7144093 -195941439 - THE1C LTR MaLR 0 375 1 8956 136 37 15 chr5 7144098 7145638 -195939894 - THE1C-int LTR MaLR -6 1574 1 2181 135 30 16 chr5 7145638 7146008 -195939524 - THE1C LTR MaLR 0 375 1 8182 198 83 16 chr5 7146008 7147752 -195937780 + L1PA16 LINE L1 119 1979 -4870 429 232 32 0 chr5 7147755 7147910 -195937622 + GA-rich Low_complexity Low_complexity 1 160 0 1294 166 169 13 chr5 7147923 7148230 -195937302 + L1PA11 LINE L1 5820 6174 0 2815 152 47 5 chr5 7148233 7148813 -195936719 + L1PA16 LINE L1 1980 2583 -4266 1067 129 31 0 chr5 7148813 7149006 -195936526 - L1PA15-16 LINE L1 -4911 1938 1740 2786 275 39 18 chr5 7149009 7150181 -195935351 + L1PA16 LINE L1 2540 3736 -3113 4041 165 42 6 chr5 7150192 7151588 -195933944 + L1PA16 LINE L1 5295 6734 -135 233 193 34 91 chr5 7151688 7151776 -195933756 + L1PA16 LINE L1 6747 6829 -40 2196 103 3 29 chr5 7151777 7152089 -195933443 + AluSp SINE Alu 1 304 -9 2721 232 17 27 chr5 7152177 7152818 -195932714 - L1M4 LINE L1 -797 5349 4716 2141 187 26 35 chr5 7152818 7153277 -195932255 + MSTB2 LTR MaLR 3 457 0 2721 232 17 27 chr5 7153277 7153455 -195932077 - L1M4 LINE L1 -1430 4716 4538 2103 118 7 10 chr5 7154238 7154534 -195930998 + AluSq SINE Alu 1 295 -18 1999 112 36 10 chr5 7154599 7154868 -195930664 + AluY SINE Alu 1 280 -31 297 0 0 0 chr5 7154868 7154901 -195930631 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1999 112 36 10 chr5 7154901 7154934 -195930598 + AluY SINE Alu 280 311 0 831 237 38 114 chr5 7155871 7156293 -195929239 + MLT1B LTR MaLR 1 390 0 300 315 0 0 chr5 7157069 7157177 -195928355 + GA-rich Low_complexity Low_complexity 1 108 0 1141 175 85 90 chr5 7157630 7157951 -195927581 + MLT1A1 LTR MaLR 2 322 -43 1891 131 0 0 chr5 7157951 7158219 -195927313 - AluSc SINE Alu -5 304 37 1141 175 85 90 chr5 7158219 7158263 -195927269 + MLT1A1 LTR MaLR 322 365 0 417 281 101 26 chr5 7158379 7158834 -195926698 - MER69 DNA AcHobo -27 2499 2011 741 299 129 6 chr5 7158858 7159222 -195926310 - MER69 DNA AcHobo -2016 510 102 604 280 36 10 chr5 7159409 7159602 -195925930 + MIR SINE MIR 65 262 0 2378 73 7 0 chr5 7160688 7160991 -195924541 - AluY SINE Alu -6 305 1 1226 84 48 0 chr5 7162816 7163043 -195922489 + HERVH LTR ERV1 437 674 -7039 183 42 0 0 chr5 7163782 7163806 -195921726 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1604 89 4 0 chr5 7164071 7164308 -195921224 + HERVH LTR ERV1 437 674 -7039 5153 110 24 17 chr5 7164332 7165812 -195919720 + HERVH LTR ERV1 1 1430 -6283 35069 39 2 3 chr5 7165812 7171115 -195914417 + L1PA4 LINE L1 850 6147 -8 10154 91 8 26 chr5 7171121 7172722 -195912810 + HERVH LTR ERV1 1415 2987 -4726 5906 84 2 2 chr5 7172716 7173570 -195911962 + HERVH LTR ERV1 3140 3993 -3720 * 4260 127 1 1 chr5 7173572 7174234 -195911298 + HERVH LTR ERV1 4488 5149 -2564 1239 136 28 0 chr5 7174235 7174449 -195911083 + HERVH LTR ERV1 5600 5819 -1894 2196 96 53 11 chr5 7174449 7174823 -195910709 + HERVH LTR ERV1 7324 7713 0 2268 91 129 5 chr5 7174823 7175217 -195910315 + LTR7 LTR ERV1 1 443 -7 1492 199 30 41 chr5 7176268 7176709 -195908823 - MER65A LTR ERV1 -9 436 1 395 272 91 48 chr5 7176828 7177265 -195908267 + L1ME1 LINE L1 791 1247 -5001 2159 135 3 0 chr5 7177265 7177576 -195907956 + AluSx SINE Alu 1 312 0 395 272 91 48 chr5 7177576 7177692 -195907840 + L1ME1 LINE L1 1247 1357 -4891 352 246 126 0 chr5 7177734 7177909 -195907623 + L1ME1 LINE L1 5032 5228 -987 2198 150 14 3 chr5 7177927 7178287 -195907245 - THE1B LTR MaLR 0 364 1 741 60 0 17 chr5 7178292 7178408 -195907124 - THE1B-int LTR MaLR -6 1574 1461 * 2954 105 47 76 chr5 7178404 7178956 -195906576 - THE1B-int LTR MaLR -1044 536 1 2118 140 20 6 chr5 7178956 7179313 -195906219 - THE1B LTR MaLR 0 364 3 1919 246 78 21 chr5 7179315 7180213 -195905319 + L1ME1 LINE L1 5244 6194 -41 24 0 0 0 chr5 7180503 7180527 -195905005 + AT_rich Low_complexity Low_complexity 1 24 0 268 250 40 55 chr5 7181104 7181220 -195904312 + MLT1J2 LTR MaLR 80 157 -293 251 214 18 0 chr5 7181327 7181383 -195904149 - L1ME LINE L1 -287 5877 5821 1926 312 49 42 chr5 7181865 7182998 -195902534 + L1M3f LINE L1 41 1182 -4146 5215 25 0 5 chr5 7183014 7183624 -195901908 + L1PA3 LINE L1 5546 6152 -3 5608 182 39 11 chr5 7183756 7184303 -195901229 + L1MA8 LINE L1 4136 4666 -1625 225 0 0 0 chr5 7184303 7184328 -195901204 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5608 182 39 11 chr5 7184328 7185378 -195900154 + L1MA8 LINE L1 4666 5807 -484 315 0 0 0 chr5 7185378 7185413 -195900119 + (CA)n Simple_repeat Simple_repeat 2 36 0 5608 182 39 11 chr5 7185413 7185814 -195899718 + L1MA8 LINE L1 5807 6195 -96 1747 236 83 18 chr5 7186369 7186938 -195898594 + L1ME1 LINE L1 5541 6146 -20 2477 80 0 0 chr5 7188663 7188974 -195896558 - AluY SINE Alu 0 311 1 588 237 179 12 chr5 7189563 7189867 -195895665 - L1MC4a LINE L1 -371 5750 5537 3173 224 41 0 chr5 7190138 7190816 -195894716 + MER54A LTR ERVL 196 901 0 408 337 27 11 chr5 7191191 7191375 -195894157 - MIR SINE MIR -68 194 8 215 195 65 39 chr5 7191586 7191663 -195893869 + MIR SINE MIR 128 206 -56 934 185 9 5 chr5 7192423 7192639 -195892893 + L1MA7 LINE L1 6065 6281 -10 639 176 0 0 chr5 7192701 7192809 -195892723 - FLAM_A SINE Alu -20 122 15 206 361 56 0 chr5 7192828 7192900 -195892632 - L2 LINE L2 -41 3231 3156 2702 112 26 24 chr5 7193017 7193438 -195892094 - MSTA LTR MaLR 0 428 7 658 345 109 7 chr5 7193479 7193890 -195891642 + LTR33 LTR ERVL 1 453 -68 13063 194 75 38 chr5 7196681 7202492 -195883040 + L1MA4A LINE L1 1 6054 -951 414 224 138 17 chr5 7202492 7202608 -195882924 + FLAM_C SINE Alu 2 131 -2 13063 194 75 38 chr5 7202608 7202852 -195882680 + L1MA4A LINE L1 6054 6288 -717 2239 156 5 39 chr5 7202952 7203394 -195882138 + L1MA4A LINE L1 6574 7000 -5 1169 241 118 42 chr5 7204360 7204816 -195880716 + MER74A LTR ERVL 5 495 -63 1364 116 0 54 chr5 7205273 7205497 -195880035 - AluSq SINE Alu -80 233 22 2447 183 37 123 chr5 7205631 7206466 -195879066 - L1MB4 LINE L1 0 6180 5418 1768 186 49 46 chr5 7206606 7207082 -195878450 - L1M3 LINE L1 -455 5725 5248 2471 98 136 2 chr5 7207084 7207481 -195878051 - L1PA14 LINE L1 -3 6158 5709 21 36 0 0 chr5 7207567 7207595 -195877937 + AT_rich Low_complexity Low_complexity 1 28 0 489 81 14 0 chr5 7208561 7208635 -195876897 - L1PA7 LINE L1 -957 5189 5115 6693 62 20 0 chr5 7208635 7209594 -195875938 + L1PA7 LINE L1 5177 6153 -1 526 240 35 84 chr5 7310470 7310722 -195774810 - L1MC4 LINE L1 -422 7620 7392 2069 104 0 52 chr5 7310722 7311050 -195774482 - AluSx SINE Alu -1 311 1 526 240 35 84 chr5 7311050 7311165 -195774367 - L1MC4 LINE L1 -650 7392 7273 2117 88 7 19 chr5 7314197 7314505 -195771027 - AluSq SINE Alu -9 304 1 1061 179 19 93 chr5 7314538 7314862 -195770670 + AluJo SINE Alu 3 302 0 419 127 0 0 chr5 7319109 7319164 -195766368 - AluSg/x SINE Alu -62 247 193 911 192 124 1 chr5 7319164 7319381 -195766151 + MLT1D LTR MaLR 234 503 -2 437 239 58 7 chr5 7319624 7319762 -195765770 + AluJb SINE Alu 2 146 -166 779 133 39 100 chr5 7320076 7320112 -195765420 - MER2 DNA MER2_type -117 228 191 1739 132 35 17 chr5 7320112 7320400 -195765132 + AluJo SINE Alu 1 293 -19 779 133 39 100 chr5 7320400 7320543 -195764989 - MER2 DNA MER2_type -154 191 60 908 145 7 14 chr5 7320842 7320987 -195764545 + MLT1A2 LTR MaLR 4 147 -227 242 158 18 53 chr5 7321002 7321059 -195764473 + MLT1A2 LTR MaLR 320 374 0 335 232 34 24 chr5 7322850 7322944 -195762588 + L1ME LINE L1 5691 5789 -381 1886 199 55 22 chr5 7322944 7323396 -195762136 + MLT1C LTR MaLR 1 467 0 335 232 34 24 chr5 7323396 7323468 -195762064 + L1ME LINE L1 5789 5859 -311 1511 141 26 30 chr5 7323475 7323744 -195761788 + AluJo SINE Alu 7 274 -38 290 88 62 12 chr5 7323747 7323827 -195761705 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 303 188 188 0 chr5 7324371 7324451 -195761081 - MER21A LTR ERV1 -2 929 835 420 147 0 0 chr5 7325251 7325326 -195760206 + (CA)n Simple_repeat Simple_repeat 2 76 0 1239 91 0 0 chr5 7325329 7325504 -195760028 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 237 125 14 139 chr5 7325747 7325819 -195759713 + MLT2B1 LTR ERVL 458 520 0 2192 114 0 7 chr5 7325929 7326236 -195759296 - AluSx SINE Alu -7 305 1 2119 79 14 0 chr5 7326298 7326588 -195758944 - AluY SINE Alu -17 294 1 1205 102 41 5 chr5 7326588 7326784 -195758748 - AluSg/x SINE Alu -15 297 95 2047 267 86 22 chr5 7326927 7327313 -195758219 - L2 LINE L2 -198 3115 2755 1603 166 49 11 chr5 7327313 7327597 -195757935 + AluJo SINE Alu 1 295 -17 2047 267 86 22 chr5 7327597 7328057 -195757475 - L2 LINE L2 -558 2755 2214 2104 134 30 60 chr5 7328501 7328903 -195756629 - MLT1B LTR MaLR 0 390 1 2301 72 3 0 chr5 7328983 7329276 -195756256 - AluSp SINE Alu -19 294 1 929 183 107 0 chr5 7331478 7331675 -195753857 - MER2 DNA MER2_type -118 227 10 347 239 142 45 chr5 7332496 7332651 -195752881 + MIR SINE MIR 6 175 -87 1491 55 50 15 chr5 7334283 7334483 -195751049 + AluSq SINE Alu 86 292 -21 289 269 39 62 chr5 7335402 7335532 -195750000 + MIR3 SINE MIR 15 141 -67 21 36 0 0 chr5 7336277 7336305 -195749227 + AT_rich Low_complexity Low_complexity 1 28 0 1967 116 42 11 chr5 7337391 7337675 -195747857 + AluSq SINE Alu 1 293 -20 237 208 198 31 chr5 7338651 7338747 -195746785 - L2 LINE L2 -2833 481 370 257 173 19 0 chr5 7341778 7341830 -195743702 + MER4-int LTR ERV1 1104 1156 -5442 1032 156 0 0 chr5 7341831 7342011 -195743521 + (TG)n Simple_repeat Simple_repeat 1 180 0 4610 161 48 9 chr5 7343575 7344437 -195741095 + MER54A LTR ERVL 1 895 -6 231 217 0 0 chr5 7344441 7344487 -195741045 + MIR SINE MIR 102 147 -115 25 31 0 0 chr5 7345284 7345316 -195740216 + AT_rich Low_complexity Low_complexity 1 32 0 526 197 66 7 chr5 7345566 7345703 -195739829 - L1MB3 LINE L1 -99 6084 5940 2408 92 0 0 chr5 7345705 7345999 -195739533 + AluSg SINE Alu 1 294 -16 2222 111 53 42 chr5 7345999 7346359 -195739173 - THE1B LTR MaLR 0 364 1 282 261 123 15 chr5 7348739 7348869 -195736663 + L2 LINE L2 2891 3034 -279 287 333 50 0 chr5 7348923 7349022 -195736510 + L2 LINE L2 3210 3313 0 1986 131 25 0 chr5 7349430 7349712 -195735820 - AluY SINE Alu -22 289 1 704 78 0 0 chr5 7352303 7352393 -195733139 + THE1C LTR MaLR 1 90 -285 1337 171 89 0 chr5 7352404 7352662 -195732870 + MER50 LTR ERV1 431 711 -23 1752 176 0 35 chr5 7353135 7353454 -195732078 - AluJb SINE Alu -4 308 1 273 293 53 30 chr5 7353555 7353688 -195731844 - MLT1I LTR MaLR -52 357 222 937 108 67 121 chr5 7353795 7353962 -195731570 - MER39B LTR ERV1 -1 652 500 1764 155 30 0 chr5 7353962 7354233 -195731299 - AluJo SINE Alu -22 290 12 937 108 67 121 chr5 7354233 7354305 -195731227 - MER39B LTR ERV1 -153 500 426 2363 82 10 0 chr5 7354590 7354883 -195730649 - AluSx SINE Alu -16 296 1 2007 143 3 10 chr5 7354957 7355281 -195730251 - AluSx SINE Alu 0 312 1 1974 129 7 7 chr5 7355823 7356117 -195729415 - AluSx SINE Alu -18 294 1 343 324 14 28 chr5 7356936 7357081 -195728451 + MIR SINE MIR 85 227 -35 719 222 81 0 chr5 7359816 7360001 -195725531 + Charlie1a DNA MER1_type 5 204 -1251 1643 164 28 11 chr5 7360027 7360313 -195725219 + AluJo SINE Alu 1 291 -21 942 155 263 11 chr5 7360314 7360592 -195724940 + Charlie1a DNA MER1_type 739 1086 -369 1397 168 16 29 chr5 7360607 7360851 -195724681 + AluJo SINE Alu 1 241 -71 3609 143 50 26 chr5 7360852 7360993 -195724539 - MER50 LTR ERV1 -23 711 575 2329 101 0 7 chr5 7360993 7361301 -195724231 + AluSx SINE Alu 1 306 -6 3609 143 50 26 chr5 7361301 7361853 -195723679 - MER50 LTR ERV1 -159 575 1 231 184 0 0 chr5 7361853 7361891 -195723641 + AluJo SINE Alu 238 275 -27 2424 183 99 3 chr5 7361997 7362571 -195722961 + L1MB8 LINE L1 5546 6174 -4 733 181 7 34 chr5 7362569 7362718 -195722814 + L1ME LINE L1 5421 5565 -601 * 344 229 172 19 chr5 7362894 7362972 -195722560 - LTR41 LTR ERVL -592 181 116 180 0 0 0 chr5 7362972 7362992 -195722540 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 344 229 172 19 chr5 7362992 7363070 -195722462 - LTR41 LTR ERVL -657 116 1 2382 109 3 0 chr5 7363245 7363557 -195721975 - AluSq SINE Alu 0 313 1 2114 73 48 0 chr5 7363748 7364042 -195721490 - AluSp SINE Alu 0 307 1 1486 146 108 0 chr5 7364390 7364658 -195720874 - AluSx SINE Alu -15 297 1 249 111 0 0 chr5 7364864 7364900 -195720632 + L1MC3 LINE L1 7238 7273 -512 3006 119 13 0 chr5 7364904 7365356 -195720176 - LTR3b LTR ERVK 0 500 43 1072 235 15 8 chr5 7365489 7365748 -195719784 + MLT1F1 LTR MaLR 266 526 -41 1795 183 64 43 chr5 7365748 7365767 -195719765 + MER74A LTR ERVL 1 18 -540 2237 131 3 6 chr5 7365767 7366079 -195719453 - AluSx SINE Alu -1 311 1 1795 183 64 43 chr5 7366079 7366245 -195719287 + MER74A LTR ERVL 18 179 -379 1892 146 58 18 chr5 7366245 7366575 -195718957 - MER61A LTR ERV1 0 343 1 1795 183 64 43 chr5 7366575 7366826 -195718706 + MER74A LTR ERVL 179 447 -111 2396 84 0 31 chr5 7366827 7367147 -195718385 - AluSg SINE Alu 0 310 1 1070 255 125 22 chr5 7367147 7367516 -195718016 + L2 LINE L2 1818 2224 -1090 1839 109 0 0 chr5 7367524 7367762 -195717770 + AluSx SINE Alu 56 293 -19 348 233 144 70 chr5 7368142 7368430 -195717102 - MLT1A2 LTR MaLR 0 390 69 2155 130 10 0 chr5 7369620 7369920 -195715612 + AluSx SINE Alu 1 303 -9 1298 191 73 31 chr5 7369921 7370276 -195715256 - Charlie5 DNA MER1_type -268 2344 1975 2304 99 10 0 chr5 7370282 7370584 -195714948 - AluSx SINE Alu -7 305 1 337 261 45 9 chr5 7370586 7370697 -195714835 - Charlie5 DNA MER1_type -2464 148 34 410 180 72 18 chr5 7370799 7370910 -195714622 + LTR34 LTR ERV1 1 117 -547 875 214 99 97 chr5 7370988 7371454 -195714078 + LTR34 LTR ERV1 137 695 -4 2826 101 0 5 chr5 7371986 7372363 -195713169 + THE1C LTR MaLR 1 375 0 263 238 60 24 chr5 7372549 7372633 -195712899 - MLT1L LTR MaLR -2 613 527 307 170 0 0 chr5 7373224 7373277 -195712255 + MER50 LTR ERV1 1 53 -681 616 278 70 15 chr5 7373409 7373668 -195711864 + MSTC-int LTR MaLR 329 601 -770 276 125 0 0 chr5 7373668 7373708 -195711824 - MSTA LTR MaLR 0 428 389 1632 160 0 30 chr5 7373708 7373971 -195711561 + AluJo SINE Alu 1 255 -57 1485 177 4 8 chr5 7373980 7374229 -195711303 - AluJb SINE Alu -43 269 22 943 128 20 71 chr5 7374246 7374442 -195711090 - MSTB LTR MaLR -240 186 1 259 314 154 6 chr5 7374681 7374850 -195710682 + MSTC-int LTR MaLR 692 885 -486 1701 142 0 73 chr5 7374878 7375180 -195710352 - AluJb SINE Alu -32 280 1 470 243 121 0 chr5 7375394 7375534 -195709998 + MSTC-int LTR MaLR 1215 1371 0 2360 151 78 2 chr5 7375667 7376065 -195709467 + MSTC LTR MaLR 1 428 0 387 197 197 59 chr5 7376181 7376333 -195709199 - MIR SINE MIR -80 182 10 1648 158 27 7 chr5 7376811 7377103 -195708429 - AluJb SINE Alu -14 298 1 816 168 0 45 chr5 7377558 7377713 -195707819 + AluJo SINE Alu 11 158 -154 1924 123 3 48 chr5 7377741 7378051 -195707481 + AluSx SINE Alu 1 296 -16 2048 141 7 0 chr5 7378439 7378736 -195706796 - AluSx SINE Alu -11 301 3 541 198 100 23 chr5 7378807 7379057 -195706475 + MLT1D LTR MaLR 39 325 -142 1805 111 131 8 chr5 7379057 7379408 -195706124 + MSTA LTR MaLR 1 394 -34 1180 111 7 0 chr5 7379409 7379562 -195705970 - AluSp SINE Alu -13 300 147 477 310 80 2 chr5 7380017 7380285 -195705247 + L1MB8 LINE L1 5858 6161 -5 265 205 21 28 chr5 7380439 7380690 -195704842 + CT-rich Low_complexity Low_complexity 1 249 0 210 37 0 0 chr5 7381515 7381542 -195703990 + (TC)n Simple_repeat Simple_repeat 1 27 0 587 184 0 6 chr5 7381542 7381648 -195703884 + (CA)n Simple_repeat Simple_repeat 2 108 -71 212 0 36 0 chr5 7381648 7381676 -195703856 + (TC)n Simple_repeat Simple_repeat 1 29 0 587 184 0 6 chr5 7381676 7381748 -195703784 + (CA)n Simple_repeat Simple_repeat 108 179 0 2152 112 11 0 chr5 7381909 7382196 -195703336 - AluSx SINE Alu -18 294 5 499 176 84 8 chr5 7382298 7382429 -195703103 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 7382690 7382806 -195702726 + G-rich Low_complexity Low_complexity 3 115 0 4588 137 58 33 chr5 7384897 7385805 -195699727 + pTR5 LTR ERV1 742 1672 -766 399 239 0 0 chr5 7385905 7385993 -195699539 + MLT1D LTR MaLR 418 505 0 2071 115 0 37 chr5 7386066 7386362 -195699170 + AluSx SINE Alu 4 288 -24 3933 170 9 58 chr5 7386390 7387149 -195698383 + MER72 LTR ERV1 1 722 0 316 224 90 14 chr5 7387979 7388168 -195697364 + L1MC5 LINE L1 7278 7414 -394 260 156 0 0 chr5 7388168 7388213 -195697319 - MLT1F1 LTR MaLR 0 567 523 780 193 76 0 chr5 7388240 7388411 -195697121 - MLT1F1 LTR MaLR -362 205 22 1845 112 18 29 chr5 7388411 7388687 -195696845 + AluSx SINE Alu 1 273 -39 858 98 196 12 chr5 7388808 7388971 -195696561 + pTR5 LTR ERV1 1833 2025 -413 278 210 30 40 chr5 7388971 7389071 -195696461 + LTR30 LTR ERV1 544 642 -80 2274 95 9 0 chr5 7389071 7389398 -195696134 + pTR5 LTR ERV1 66 395 -2043 786 231 61 47 chr5 7391086 7391298 -195694234 - MIR SINE MIR 0 262 48 531 234 148 65 chr5 7391949 7392239 -195693293 - L1MC5 LINE L1 -23 7938 7625 445 233 6 69 chr5 7393213 7393372 -195692160 - MER20 DNA MER1_type -53 166 18 25 51 0 0 chr5 7394911 7394950 -195690582 + AT_rich Low_complexity Low_complexity 1 39 0 207 0 0 0 chr5 7394976 7394999 -195690533 + (TATG)n Simple_repeat Simple_repeat 4 26 0 231 36 0 0 chr5 7395757 7395785 -195689747 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 462 143 0 0 chr5 7396266 7396343 -195689189 + (A)n Simple_repeat Simple_repeat 1 77 0 195 100 0 0 chr5 7398164 7398194 -195687338 + (CCCG)n Simple_repeat Simple_repeat 3 32 0 777 122 0 0 chr5 7398670 7398785 -195686747 + MER4D LTR ERV1 1 115 -788 1364 146 35 22 chr5 7398785 7399011 -195686521 + AluSx SINE Alu 1 229 -83 4062 148 32 37 chr5 7399035 7399840 -195685692 + MER4D LTR ERV1 103 903 0 309 277 27 20 chr5 7399851 7399999 -195685533 - LTR37A LTR ERV1 0 426 278 2272 179 56 99 chr5 7400025 7400497 -195685035 + MER72 LTR ERV1 15 451 -271 1725 166 0 30 chr5 7400497 7400792 -195684740 + AluJo SINE Alu 1 286 -26 2272 179 56 99 chr5 7400792 7400982 -195684550 + MER72 LTR ERV1 451 648 -74 398 190 86 17 chr5 7401420 7401536 -195683996 - LTR37A LTR ERV1 -295 131 8 1432 7 7 0 chr5 7401974 7402129 -195683403 - AluY SINE Alu -155 156 1 469 178 164 48 chr5 7402679 7402825 -195682707 + FRAM SINE Alu 1 162 -14 288 143 20 19 chr5 7403468 7403520 -195682012 + FRAM/FAM SINE Alu 16 63 -103 279 79 0 0 chr5 7403635 7403673 -195681859 + (TG)n Simple_repeat Simple_repeat 1 38 0 254 282 0 14 chr5 7403823 7403894 -195681638 + (TG)n Simple_repeat Simple_repeat 1 70 0 317 202 110 0 chr5 7404268 7404348 -195681184 - AluJ/FLAM SINE Alu -214 88 9 201 74 0 0 chr5 7404360 7404387 -195681145 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr5 7404517 7404541 -195680991 + (TTAG)n Simple_repeat Simple_repeat 1 24 0 523 209 104 31 chr5 7404552 7404715 -195680817 - AluJb SINE Alu -2 310 136 689 166 92 18 chr5 7405529 7405692 -195679840 - FRAM SINE Alu -2 174 1 326 117 11 96 chr5 7406962 7407056 -195678476 + AluS SINE Alu 1 86 -217 275 235 81 12 chr5 7407815 7407922 -195677610 + AluJo SINE Alu 121 204 -98 484 347 0 0 chr5 7408724 7409025 -195676507 + (CA)n Simple_repeat Simple_repeat 1 301 0 285 36 36 36 chr5 7409280 7409336 -195676196 + (TTTTTG)n Simple_repeat Simple_repeat 5 60 0 186 174 0 0 chr5 7409650 7409696 -195675836 + (CA)n Simple_repeat Simple_repeat 1 46 0 919 279 54 56 chr5 7411062 7411152 -195674380 - MLT1I LTR MaLR 0 409 320 1672 139 12 90 chr5 7411152 7411371 -195674161 + AluJo SINE Alu 1 189 -123 1900 138 26 20 chr5 7411371 7411675 -195673857 - AluSx SINE Alu -6 306 1 1672 139 12 90 chr5 7411675 7411778 -195673754 + AluJo SINE Alu 189 298 -14 919 279 54 56 chr5 7411778 7412095 -195673437 - MLT1I LTR MaLR -89 320 3 1861 206 61 41 chr5 7412290 7412849 -195672683 - L1ME1 LINE L1 0 6166 5597 345 249 63 79 chr5 7412857 7412897 -195672635 - L1ME1 LINE L1 -2312 5473 5434 1945 155 3 10 chr5 7412897 7413206 -195672326 - AluJo SINE Alu -4 308 2 345 249 63 79 chr5 7413206 7413230 -195672302 - L1ME1 LINE L1 -2351 5434 5411 582 120 56 9 chr5 7413230 7413338 -195672194 - L1MB3 LINE L1 -4 6179 6067 345 249 63 79 chr5 7413338 7413461 -195672071 - L1ME1 LINE L1 -2374 5411 5288 226 192 0 19 chr5 7413511 7413563 -195671969 + L1M LINE L1 5310 5360 -804 243 280 220 38 chr5 7414011 7414143 -195671389 + MIR SINE MIR 82 237 -25 2213 99 74 42 chr5 7414143 7414496 -195671036 - THE1B LTR MaLR 0 364 1 735 252 52 0 chr5 7414667 7414822 -195670710 + AluJo SINE Alu 13 175 -137 818 198 99 11 chr5 7415445 7415708 -195669824 - Charlie1b DNA MER1_type -129 394 109 961 198 6 0 chr5 7415719 7415891 -195669641 + FRAM SINE Alu 1 173 -3 302 146 0 0 chr5 7416672 7416720 -195668812 - AluSp SINE Alu -122 181 134 31 20 0 20 chr5 7417060 7417078 -195668454 + AT_rich Low_complexity Low_complexity 1 18 -30 2313 101 0 0 chr5 7417078 7417374 -195668158 + AluSx SINE Alu 1 296 -16 31 20 0 20 chr5 7417374 7417404 -195668128 + AT_rich Low_complexity Low_complexity 18 48 0 2216 119 39 18 chr5 7417516 7417904 -195667628 - L1PB3 LINE L1 -74 6080 5685 250 232 295 11 chr5 7418926 7419021 -195666511 + MIR SINE MIR 32 153 -55 2255 125 0 3 chr5 7419101 7419406 -195666126 + AluJb SINE Alu 9 312 0 1870 168 3 16 chr5 7419494 7419626 -195665906 + AluJo SINE Alu 1 133 -179 2253 104 7 7 chr5 7419626 7419924 -195665608 + AluSg SINE Alu 1 298 -12 1870 168 3 16 chr5 7419924 7420106 -195665426 + AluJo SINE Alu 133 311 -1 2193 144 34 3 chr5 7420309 7420664 -195664868 - MER47A DNA MER2_type 0 366 1 1896 121 57 3 chr5 7421315 7421597 -195663935 - AluSx SINE Alu -15 297 1 2404 84 0 3 chr5 7421985 7422281 -195663251 - AluSg SINE Alu -13 297 3 1962 152 13 3 chr5 7422289 7422592 -195662940 - AluJb SINE Alu -6 306 1 565 191 45 0 chr5 7422974 7423084 -195662448 + FRAM SINE Alu 57 171 -5 259 239 146 15 chr5 7423092 7423222 -195662310 - MLT1F-int LTR MaLR -1221 150 4 981 261 105 51 chr5 7423234 7423545 -195661987 - MLT1F LTR MaLR 0 542 249 201 108 0 0 chr5 7423545 7423582 -195661950 + (CA)n Simple_repeat Simple_repeat 2 38 0 981 261 105 51 chr5 7423582 7423658 -195661874 - MLT1F LTR MaLR -293 249 179 2207 107 52 50 chr5 7423658 7423755 -195661777 + THE1B LTR MaLR 1 96 -268 2246 108 3 3 chr5 7423755 7424050 -195661482 - AluSq SINE Alu -18 295 1 2207 107 52 50 chr5 7424050 7424315 -195661217 + THE1B LTR MaLR 96 364 0 981 261 105 51 chr5 7424315 7424440 -195661092 - MLT1F LTR MaLR -363 179 1 400 264 174 28 chr5 7424441 7424619 -195660913 + L1MC4 LINE L1 7839 8042 0 1182 134 31 76 chr5 7425369 7425592 -195659940 + AluJb SINE Alu 86 298 -14 1310 131 149 62 chr5 7425797 7425835 -195659697 - MLT1A1 LTR MaLR 0 365 332 2093 121 0 0 chr5 7425835 7426151 -195659381 + AluSx SINE Alu 1 316 0 1310 131 149 62 chr5 7426151 7426447 -195659085 - MLT1A1 LTR MaLR -33 332 1 454 208 10 10 chr5 7426489 7426585 -195658947 + MLT2F LTR ERVL 1 96 -567 2316 108 0 22 chr5 7426712 7427028 -195658504 + AluSx SINE Alu 1 309 -3 948 163 7 13 chr5 7427033 7427229 -195658303 + FRAM SINE Alu 1 176 0 206 173 37 62 chr5 7427323 7427404 -195658128 + CT-rich Low_complexity Low_complexity 4 82 0 444 238 0 5 chr5 7429504 7429714 -195655818 + (CA)n Simple_repeat Simple_repeat 1 208 0 534 79 0 0 chr5 7430178 7430254 -195655278 + (CA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr5 7430368 7430406 -195655126 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 456 19 0 0 chr5 7431926 7431979 -195653553 + (TTTC)n Simple_repeat Simple_repeat 4 56 0 379 331 42 13 chr5 7432151 7432429 -195653103 + L1M2 LINE L1 2786 3321 -4245 201 169 62 46 chr5 7432655 7432720 -195652812 - MIR3 SINE MIR -142 66 1 267 282 3 52 chr5 7434183 7434367 -195651165 + CT-rich Low_complexity Low_complexity 4 290 0 305 206 72 21 chr5 7438157 7438254 -195647278 + AluSg SINE Alu 2 103 -197 808 161 20 16 chr5 7438294 7438547 -195646985 + GA-rich Low_complexity Low_complexity 1 254 0 277 247 59 18 chr5 7439138 7439266 -195646266 - L1MA4A LINE L1 -349 5953 5821 244 231 0 0 chr5 7439266 7439318 -195646214 + MLT2B3 LTR ERVL 3 54 -500 243 0 0 0 chr5 7439607 7439634 -195645898 + (GTTTG)n Simple_repeat Simple_repeat 3 29 0 740 272 43 66 chr5 7440201 7440891 -195644641 - L1MA5 LINE L1 -369 5931 5265 377 320 20 20 chr5 7440934 7441087 -195644445 - L1MA5 LINE L1 -1020 5126 4974 232 300 11 33 chr5 7441468 7441558 -195643974 + CT-rich Low_complexity Low_complexity 5 92 0 578 14 14 0 chr5 7441586 7441657 -195643875 + (TTC)n Simple_repeat Simple_repeat 3 74 0 234 0 0 0 chr5 7441657 7441683 -195643849 + (TC)n Simple_repeat Simple_repeat 2 27 0 293 217 9 70 chr5 7442196 7442311 -195643221 + (GGGTG)n Simple_repeat Simple_repeat 4 111 0 444 77 0 0 chr5 7442462 7442527 -195643005 + (CA)n Simple_repeat Simple_repeat 2 66 0 521 160 9 0 chr5 7442584 7442690 -195642842 + CT-rich Low_complexity Low_complexity 4 110 0 550 203 17 34 chr5 7442835 7442953 -195642579 - FLAM_A SINE Alu -18 124 9 278 316 79 34 chr5 7442971 7443237 -195642295 - L1M4 LINE L1 -2885 3261 2984 317 255 71 50 chr5 7443328 7443469 -195642063 - L1M4 LINE L1 -3223 2923 2780 242 250 0 0 chr5 7443541 7443597 -195641935 + FLAM_A SINE Alu 41 96 -37 620 297 38 18 chr5 7444224 7444471 -195641061 - L1MA5A LINE L1 -382 5918 5665 209 256 64 26 chr5 7445072 7445150 -195640382 + MIR SINE MIR 58 138 -124 447 106 0 0 chr5 7445807 7445873 -195639659 + (TTC)n Simple_repeat Simple_repeat 2 67 0 1546 93 5 14 chr5 7446131 7446346 -195639186 + AluSg/x SINE Alu 99 311 -1 833 233 83 97 chr5 7446351 7446505 -195639027 + L1ME1 LINE L1 5674 5829 -337 2385 91 0 25 chr5 7446505 7446824 -195638708 - AluY SINE Alu 0 311 1 833 233 83 97 chr5 7446824 7447143 -195638389 + L1ME1 LINE L1 5829 6134 -32 705 151 19 0 chr5 7447144 7447250 -195638282 + FLAM_C SINE Alu 2 109 -34 1766 171 0 16 chr5 7447322 7447632 -195637900 - AluJo SINE Alu 0 312 8 1693 132 4 0 chr5 7448095 7448330 -195637202 - AluSq SINE Alu -14 299 64 799 231 19 37 chr5 7448614 7449009 -195636523 - MLT1H LTR MaLR 0 549 30 204 217 0 0 chr5 7449741 7449787 -195635745 + L2 LINE L2 2911 2956 -316 233 333 0 0 chr5 7450933 7451005 -195634527 + L2 LINE L2 2902 2973 -299 2106 200 72 4 chr5 7451404 7451878 -195633654 + L1MB8 LINE L1 5581 6086 -92 2051 115 6 32 chr5 7451991 7452303 -195633229 - AluY SINE Alu -3 308 5 29 47 0 0 chr5 7453423 7453466 -195632066 + AT_rich Low_complexity Low_complexity 1 43 0 1933 186 38 53 chr5 7453466 7453589 -195631943 + MLT1D LTR MaLR 1 124 -381 2153 101 10 10 chr5 7453589 7453609 -195631923 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 7453609 7453630 -195631902 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2153 101 10 10 chr5 7453630 7453907 -195631625 - AluSx SINE Alu -31 281 2 1933 186 38 53 chr5 7453907 7454288 -195631244 + MLT1D LTR MaLR 124 497 -8 908 242 54 0 chr5 7454472 7454695 -195630837 + L1MC4 LINE L1 6800 7034 -1008 1234 156 0 0 chr5 7454708 7454881 -195630651 - AluSq SINE Alu -140 173 1 1924 226 66 20 chr5 7454914 7455507 -195630025 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 7455525 7455550 -195629982 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1241 161 89 67 chr5 7455553 7455628 -195629904 + L1MB4 LINE L1 5811 5883 -297 1226 176 146 23 chr5 7455628 7455889 -195629643 + AluSg1 SINE Alu 2 294 -15 2235 115 3 13 chr5 7455891 7456204 -195629328 + AluSx SINE Alu 3 312 0 1241 161 89 67 chr5 7456204 7456486 -195629046 + L1MB4 LINE L1 5883 6179 -1 995 168 35 107 chr5 7456528 7456635 -195628897 + L1MC4 LINE L1 7709 7822 -220 810 65 28 0 chr5 7456635 7456742 -195628790 + HY1 scRNA scRNA 2 111 -1 995 168 35 107 chr5 7456742 7456755 -195628777 + L1MC4 LINE L1 7822 7834 -208 207 114 0 0 chr5 7456755 7456790 -195628742 + (TG)n Simple_repeat Simple_repeat 2 36 0 995 168 35 107 chr5 7456790 7456806 -195628726 + L1MC4 LINE L1 7834 7850 -192 2428 99 0 0 chr5 7456806 7457109 -195628423 + AluSx SINE Alu 1 303 -9 995 168 35 107 chr5 7457109 7457315 -195628217 + L1MC4 LINE L1 7850 8028 -14 3177 73 22 44 chr5 7457625 7458079 -195627453 + MLT2A1 LTR ERVL 1 444 0 766 235 105 17 chr5 7458174 7458468 -195627064 + L1ME3 LINE L1 5843 6162 0 1784 195 35 0 chr5 7459126 7459495 -195626037 - MER89 LTR ERV1 0 559 178 1087 51 0 101 chr5 7459948 7460543 -195624989 + (ACTG)n Simple_repeat Simple_repeat 1 705 0 287 208 0 0 chr5 7463471 7463524 -195622008 - PMER1 DNA MER1_type -37 53 1 189 74 0 0 chr5 7463868 7463895 -195621637 + (CA)n Simple_repeat Simple_repeat 2 28 0 198 253 44 33 chr5 7463901 7463992 -195621540 + L2 LINE L2 2191 2282 -1032 409 233 117 0 chr5 7466281 7466384 -195619148 + FLAM_A SINE Alu 1 115 -18 210 300 154 18 chr5 7466705 7466815 -195618717 + L2 LINE L2 3004 3128 -185 313 272 88 14 chr5 7467416 7467563 -195617969 + FRAM SINE Alu 8 165 -1 441 307 0 7 chr5 7467568 7467705 -195617827 - MLT1B LTR MaLR -218 172 37 231 213 44 48 chr5 7468533 7468601 -195616931 + MIR SINE MIR 1 66 -142 234 91 0 0 chr5 7468820 7468853 -195616679 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 291 175 0 0 chr5 7469849 7469906 -195615626 + CT-rich Low_complexity Low_complexity 1 57 0 256 236 5 169 chr5 7470071 7470266 -195615266 + L1MB1 LINE L1 5429 5591 -587 195 69 0 0 chr5 7470610 7470639 -195614893 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 261 269 0 0 chr5 7471236 7471303 -195614229 + L1MB1 LINE L1 5850 5916 -252 181 219 266 0 chr5 7471326 7471390 -195614142 - L2 LINE L2 -1813 1501 1421 288 250 130 0 chr5 7471512 7471604 -195613928 + AluJb SINE Alu 2 105 -197 288 0 0 0 chr5 7472824 7472856 -195612676 + (TC)n Simple_repeat Simple_repeat 1 32 0 255 140 0 0 chr5 7472856 7472906 -195612626 + (CA)n Simple_repeat Simple_repeat 2 51 0 500 174 128 58 chr5 7473941 7474113 -195611419 + AluJo SINE Alu 123 306 -6 206 241 23 23 chr5 7475154 7475241 -195610291 + GA-rich Low_complexity Low_complexity 3 89 0 473 196 114 44 chr5 7475957 7476115 -195609417 + FRAM SINE Alu 1 168 -8 180 0 0 0 chr5 7479215 7479235 -195606297 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 199 220 51 51 chr5 7479337 7479396 -195606136 - MIR SINE MIR -198 64 6 321 26 0 0 chr5 7480016 7480054 -195605478 + (GGA)n Simple_repeat Simple_repeat 3 40 0 234 164 0 0 chr5 7480853 7480908 -195604624 + T-rich Low_complexity Low_complexity 1 55 0 205 132 53 0 chr5 7481779 7481817 -195603715 + (TGGG)n Simple_repeat Simple_repeat 4 43 0 217 241 35 17 chr5 7481958 7482074 -195603458 + (CACAA)n Simple_repeat Simple_repeat 2 119 0 182 62 31 0 chr5 7482184 7482216 -195603316 + (CA)n Simple_repeat Simple_repeat 2 34 0 486 203 0 0 chr5 7482749 7482867 -195602665 + (TG)n Simple_repeat Simple_repeat 1 118 0 414 0 0 0 chr5 7483812 7483858 -195601674 + (CAG)n Simple_repeat Simple_repeat 3 48 0 261 231 115 26 chr5 7484393 7484471 -195601061 + FLAM_A SINE Alu 37 121 -12 295 270 27 72 chr5 7484550 7484661 -195600871 - FLAM_A SINE Alu -14 119 14 320 43 22 0 chr5 7485043 7485089 -195600443 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 237 65 0 0 chr5 7488142 7488173 -195597359 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr5 7489739 7489774 -195595758 + AT_rich Low_complexity Low_complexity 1 35 0 717 157 108 69 chr5 7490951 7491155 -195594377 - AluJo SINE Alu -92 220 9 543 81 0 0 chr5 7491940 7492026 -195593506 + (TG)n Simple_repeat Simple_repeat 2 87 0 259 237 118 0 chr5 7493002 7493089 -195592443 + FLAM_A SINE Alu 24 108 -25 378 0 0 0 chr5 7493939 7493981 -195591551 + (TG)n Simple_repeat Simple_repeat 2 43 0 397 267 55 17 chr5 7494619 7494823 -195590709 - L1 LINE L1 -2447 3699 3492 575 163 8 0 chr5 7497430 7497553 -195587979 + (CA)n Simple_repeat Simple_repeat 1 124 0 276 200 0 0 chr5 7497583 7497648 -195587884 + (CA)n Simple_repeat Simple_repeat 1 65 0 357 159 0 0 chr5 7497815 7497878 -195587654 + (TCTCTG)n Simple_repeat Simple_repeat 1 63 0 195 217 0 67 chr5 7498758 7498818 -195586714 - MIR3 SINE MIR -142 66 11 261 222 74 0 chr5 7499288 7499369 -195586163 - MLT2A2 LTR ERVL 0 453 367 215 231 0 0 chr5 7500024 7500063 -195585469 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 37 0 0 chr5 7500695 7500722 -195584810 + (CA)n Simple_repeat Simple_repeat 2 28 0 221 228 38 19 chr5 7500836 7500994 -195584538 + (CATA)n Simple_repeat Simple_repeat 4 164 0 198 0 0 0 chr5 7501563 7501585 -195583947 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 368 323 78 6 chr5 7501630 7501797 -195583735 - L1M4 LINE L1 -2562 3584 3406 666 278 81 62 chr5 7502904 7503274 -195582258 - L1M4 LINE L1 -2882 3264 2888 208 227 23 0 chr5 7503274 7503318 -195582214 + CT-rich Low_complexity Low_complexity 2 46 0 790 257 9 4 chr5 7504834 7505060 -195580472 - L1MA3 LINE L1 -375 5930 5704 339 145 0 0 chr5 7506975 7507044 -195578488 + (CA)n Simple_repeat Simple_repeat 2 70 0 626 174 90 30 chr5 7507241 7507408 -195578124 + FRAM SINE Alu 1 176 0 207 253 12 24 chr5 7509041 7509124 -195576408 + (TA)n Simple_repeat Simple_repeat 1 82 0 246 81 0 0 chr5 7509171 7509208 -195576324 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 233 50 50 chr5 7509349 7509409 -195576123 + MIR SINE MIR 6 65 -197 30 27 0 0 chr5 7509498 7509535 -195575997 + AT_rich Low_complexity Low_complexity 1 37 0 462 18 0 0 chr5 7510724 7510779 -195574753 + (CACAC)n Simple_repeat Simple_repeat 2 56 0 258 308 0 0 chr5 7511635 7511700 -195573832 + (TG)n Simple_repeat Simple_repeat 2 66 0 411 246 70 18 chr5 7511848 7511962 -195573570 - FLAM_C SINE Alu -10 123 4 265 326 62 16 chr5 7511965 7512094 -195573438 - MIR SINE MIR -113 149 15 261 326 0 12 chr5 7512542 7512628 -195572904 + GA-rich Low_complexity Low_complexity 1 85 0 306 0 0 0 chr5 7514033 7514067 -195571465 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 447 151 108 11 chr5 7514620 7514713 -195570819 - AluSq/x SINE Alu -208 105 4 309 244 109 52 chr5 7515567 7515760 -195569772 + L1MA9 LINE L1 6109 6312 0 203 303 0 15 chr5 7516061 7516127 -195569405 + (CA)n Simple_repeat Simple_repeat 1 65 0 303 28 0 0 chr5 7518198 7518234 -195567298 + (CCTG)n Simple_repeat Simple_repeat 4 39 0 537 162 89 115 chr5 7518628 7518819 -195566713 + AluJo SINE Alu 127 312 0 207 359 0 0 chr5 7519167 7519231 -195566301 + (TG)n Simple_repeat Simple_repeat 1 64 0 342 0 0 0 chr5 7519665 7519703 -195565829 + (TG)n Simple_repeat Simple_repeat 2 39 0 357 229 86 9 chr5 7519715 7519820 -195565712 - FLAM_C SINE Alu -20 113 1 319 247 142 25 chr5 7520502 7520664 -195564868 + AluJo SINE Alu 120 300 -2 204 40 0 0 chr5 7520964 7520989 -195564543 + (TG)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr5 7521366 7521397 -195564135 + AT_rich Low_complexity Low_complexity 1 31 0 195 100 0 0 chr5 7521930 7521960 -195563572 + (A)n Simple_repeat Simple_repeat 1 30 0 285 118 0 0 chr5 7522474 7522525 -195563007 + (T)n Simple_repeat Simple_repeat 1 51 0 378 0 0 0 chr5 7524574 7524616 -195560916 + (TG)n Simple_repeat Simple_repeat 1 42 0 302 0 26 0 chr5 7524615 7524653 -195560879 + (GA)n Simple_repeat Simple_repeat 1 39 0 * 255 114 0 0 chr5 7524652 7524696 -195560836 + (TG)n Simple_repeat Simple_repeat 2 45 0 * 192 40 0 0 chr5 7524726 7524738 -195560794 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 40 0 0 chr5 7524738 7524763 -195560769 + (TG)n Simple_repeat Simple_repeat 1 25 0 302 304 136 75 chr5 7525107 7525482 -195560050 + HAL1 LINE L1 880 1277 -1230 1432 184 113 0 chr5 7525728 7525994 -195559538 - AluJo SINE Alu -16 296 1 310 193 36 72 chr5 7526897 7526980 -195558552 + L2 LINE L2 3230 3309 -4 707 245 179 25 chr5 7527101 7527509 -195558023 - L1MC4 LINE L1 -89 7953 7483 235 267 133 0 chr5 7528490 7528580 -195556952 - MIR SINE MIR -48 214 113 445 202 0 0 chr5 7528664 7528748 -195556784 + MER2 DNA MER2_type 1 84 -261 679 208 8 0 chr5 7528880 7529010 -195556522 + FLAM_A SINE Alu 1 131 -2 1977 115 10 20 chr5 7529090 7529386 -195556146 - AluSx SINE Alu -19 293 1 24 0 0 0 chr5 7529484 7529508 -195556024 + AT_rich Low_complexity Low_complexity 1 24 0 1299 122 0 0 chr5 7529798 7529978 -195555554 - AluSg/x SINE Alu -13 299 120 270 185 19 0 chr5 7530297 7530351 -195555181 + MER20 DNA MER1_type 159 213 -6 187 309 112 39 chr5 7530684 7530862 -195554670 - MIR SINE MIR -10 252 62 210 260 26 39 chr5 7531286 7531363 -195554169 + L2 LINE L2 2905 2980 -333 333 0 0 0 chr5 7532495 7532532 -195553000 + (T)n Simple_repeat Simple_repeat 1 37 0 609 243 47 42 chr5 7532839 7533053 -195552479 + MIR SINE MIR 18 232 -30 211 200 40 0 chr5 7533065 7533115 -195552417 - MIR SINE MIR -144 118 67 1706 117 58 21 chr5 7533147 7533438 -195552094 - AluSx SINE Alu -9 303 2 835 128 15 0 chr5 7533736 7533869 -195551663 + FRAM SINE Alu 18 152 -24 1719 143 4 19 chr5 7534818 7535076 -195550456 + AluJo SINE Alu 34 287 -25 1654 182 29 45 chr5 7535769 7535957 -195549575 + L1MB8 LINE L1 5757 5946 -232 2066 117 3 43 chr5 7535957 7536282 -195549250 - AluSx SINE Alu 0 312 1 1654 182 29 45 chr5 7536282 7536522 -195549010 + L1MB8 LINE L1 5946 6177 -1 1934 168 0 3 chr5 7536668 7536966 -195548566 - AluJb SINE Alu -15 297 1 2400 109 0 0 chr5 7536980 7537291 -195548241 - AluY SINE Alu 0 311 1 2027 147 13 7 chr5 7537500 7537800 -195547732 - AluJo SINE Alu -10 302 1 14169 121 30 35 chr5 7537843 7537883 -195547649 + Tigger1 DNA MER2_type 2 41 -2377 721 214 0 8 chr5 7537883 7538014 -195547518 - FLAM_A SINE Alu 0 133 4 14169 121 30 35 chr5 7538014 7538931 -195546601 + Tigger1 DNA MER2_type 41 961 -1457 2286 92 27 0 chr5 7538931 7539225 -195546307 - AluSg SINE Alu -8 302 1 14169 121 30 35 chr5 7539225 7540695 -195544837 + Tigger1 DNA MER2_type 961 2418 0 894 184 89 37 chr5 7541062 7541410 -195544122 + MLT1D LTR MaLR 1 441 -64 2376 94 3 3 chr5 7541410 7541718 -195543814 - AluSp SINE Alu -5 308 1 894 184 89 37 chr5 7541718 7541785 -195543747 + MLT1D LTR MaLR 441 503 -2 628 244 142 20 chr5 7541794 7541991 -195543541 - MIR SINE MIR -39 223 3 2487 60 3 25 chr5 7542171 7542486 -195543046 - AluY SINE Alu -3 308 1 24 0 0 0 chr5 7544118 7544142 -195541390 + AT_rich Low_complexity Low_complexity 1 24 0 721 169 90 39 chr5 7544358 7544536 -195540996 + Tigger2 DNA MER2_type 6 192 -2526 241 132 176 11 chr5 7544588 7544679 -195540853 - Tigger2 DNA MER2_type -152 2566 2461 3453 136 88 24 chr5 7544724 7545429 -195540103 - Tigger2 DNA MER2_type -1968 750 1 1103 172 43 0 chr5 7545429 7545636 -195539896 + MER2 DNA MER2_type 130 345 0 895 215 58 174 chr5 7545642 7545984 -195539548 + L2 LINE L2 2709 3042 -271 639 39 0 0 chr5 7545984 7546062 -195539470 + AluY SINE Alu 222 299 -11 895 215 58 174 chr5 7546062 7546306 -195539226 + L2 LINE L2 3042 3313 0 21 0 0 0 chr5 7546794 7546815 -195538717 + AT_rich Low_complexity Low_complexity 1 21 0 212 254 136 0 chr5 7546878 7546937 -195538595 + MIR3 SINE MIR 121 187 -21 22 0 0 0 chr5 7547299 7547321 -195538211 + AT_rich Low_complexity Low_complexity 1 22 0 2150 117 0 0 chr5 7547333 7547690 -195537842 + AluSx SINE Alu 1 357 0 665 286 106 0 chr5 7548180 7548407 -195537125 + MIR SINE MIR 6 256 -6 454 292 99 5 chr5 7548844 7549036 -195536496 + MIR SINE MIR 1 210 -52 22 94 0 0 chr5 7549861 7549925 -195535607 + GC_rich Low_complexity Low_complexity 1 64 0 842 165 0 122 chr5 7551505 7551693 -195533839 - FRAM SINE Alu -1 165 1 230 192 0 39 chr5 7552152 7552204 -195533328 - MIR SINE MIR 0 262 213 306 281 126 59 chr5 7552225 7552599 -195532933 - MLT1K LTR MaLR 0 588 190 1601 150 59 28 chr5 7552776 7552939 -195532593 - AluJb SINE Alu -17 295 118 183 42 0 0 chr5 7552939 7552963 -195532569 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1601 150 59 28 chr5 7552963 7553085 -195532447 - AluJb SINE Alu -194 118 1 324 0 0 0 chr5 7553133 7553169 -195532363 + (TG)n Simple_repeat Simple_repeat 2 37 0 2358 99 0 0 chr5 7553346 7553639 -195531893 - AluSg1 SINE Alu -16 293 1 700 218 179 29 chr5 7553642 7553950 -195531582 + L1MC4 LINE L1 7684 8037 -5 2050 121 24 13 chr5 7554330 7554628 -195530904 - AluSx SINE Alu -11 301 1 343 371 45 0 chr5 7554919 7555097 -195530435 + L1MEd LINE L1 452 637 -5482 288 0 0 0 chr5 7555153 7555185 -195530347 + (TG)n Simple_repeat Simple_repeat 1 32 0 310 224 135 13 chr5 7555298 7555454 -195530078 + Charlie2 DNA MER1_type 2671 2845 -17 369 305 48 0 chr5 7555529 7555634 -195529898 + L2 LINE L2 3202 3311 -2 365 265 55 105 chr5 7555975 7556195 -195529337 - L1MC4 LINE L1 -1 8041 5884 231 61 0 0 chr5 7556358 7556391 -195529141 + (CA)n Simple_repeat Simple_repeat 1 33 0 186 189 0 0 chr5 7556946 7556983 -195528549 + (CA)n Simple_repeat Simple_repeat 2 38 0 203 200 0 0 chr5 7559885 7559920 -195525612 + T-rich Low_complexity Low_complexity 1 35 0 225 286 0 24 chr5 7559922 7560006 -195525526 + (TATG)n Simple_repeat Simple_repeat 4 85 0 209 173 36 73 chr5 7560620 7560730 -195524802 + (CAGC)n Simple_repeat Simple_repeat 2 107 0 241 262 115 25 chr5 7561773 7561895 -195523637 - L1MA7 LINE L1 -32 6259 6127 422 246 29 22 chr5 7561913 7562051 -195523481 + L1MA7 LINE L1 5980 6118 -173 189 0 0 0 chr5 7563202 7563223 -195522309 + (TC)n Simple_repeat Simple_repeat 2 22 0 284 172 156 0 chr5 7563333 7563397 -195522135 - AluJb SINE Alu -189 113 40 207 0 0 0 chr5 7563596 7563619 -195521913 + (CA)n Simple_repeat Simple_repeat 2 24 0 253 270 14 14 chr5 7563966 7564040 -195521492 + (CA)n Simple_repeat Simple_repeat 1 74 0 289 179 137 51 chr5 7566793 7566910 -195518622 + AluSq/x SINE Alu 27 105 -197 226 203 34 0 chr5 7567359 7567418 -195518114 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 347 210 57 55 chr5 7567562 7567750 -195517782 + MLT1C LTR MaLR 114 304 -163 444 77 0 0 chr5 7568558 7568623 -195516909 + (CAGAC)n Simple_repeat Simple_repeat 5 69 0 189 0 0 0 chr5 7569519 7569540 -195515992 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 561 229 96 27 chr5 7570275 7570463 -195515069 + AluJo SINE Alu 10 210 -102 258 320 66 41 chr5 7570719 7570841 -195514691 + MIR3 SINE MIR 7 131 -77 702 35 0 0 chr5 7576140 7576225 -195509307 + (CCA)n Simple_repeat Simple_repeat 1 85 0 222 37 0 0 chr5 7576228 7576255 -195509277 + (CAACC)n Simple_repeat Simple_repeat 2 28 0 204 97 0 0 chr5 7576797 7576828 -195508704 + (CCTG)n Simple_repeat Simple_repeat 3 33 0 513 47 0 0 chr5 7576962 7577026 -195508506 + (TCC)n Simple_repeat Simple_repeat 3 66 0 234 0 0 0 chr5 7577426 7577452 -195508080 + (CA)n Simple_repeat Simple_repeat 1 26 0 637 145 127 54 chr5 7577467 7577633 -195507899 - FRAM SINE Alu 0 176 1 396 0 0 0 chr5 7580696 7580740 -195504792 + (TC)n Simple_repeat Simple_repeat 1 44 0 21 57 0 0 chr5 7581319 7581354 -195504178 + AT_rich Low_complexity Low_complexity 1 35 0 220 286 0 26 chr5 7581533 7581610 -195503922 + (TATG)n Simple_repeat Simple_repeat 4 78 0 464 180 7 127 chr5 7582512 7582662 -195502870 + FLAM_C SINE Alu 2 133 0 369 0 0 0 chr5 7583192 7583233 -195502299 + (TG)n Simple_repeat Simple_repeat 2 42 0 300 183 0 0 chr5 7683665 7683725 -195401807 + L1ME1 LINE L1 5613 5672 -494 5160 39 2 5 chr5 7683748 7684382 -195401150 + L1PA5 LINE L1 5523 6154 0 811 275 67 55 chr5 7684382 7684818 -195400714 + L1ME1 LINE L1 5652 6092 -74 287 230 143 8 chr5 7684748 7684874 -195400658 + L1MA10 LINE L1 6185 6327 -7 * 882 224 36 29 chr5 7685701 7685982 -195399550 - L1MC3 LINE L1 0 7785 7503 287 343 34 14 chr5 7686009 7686216 -195399316 - L3 LINE CR1 -188 1389 1179 190 382 0 0 chr5 7686567 7686618 -195398914 - L3 LINE CR1 -2 1575 1522 4226 95 2 0 chr5 7686618 7687209 -195398323 + L1PA13 LINE L1 5572 6163 0 190 382 0 0 chr5 7687209 7687225 -195398307 - L3 LINE CR1 -54 1523 1508 2172 216 16 26 chr5 7687867 7688372 -195397160 - MER89 LTR ERV1 0 559 60 180 135 0 0 chr5 7689170 7689207 -195396325 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 640 264 146 59 chr5 7689434 7689908 -195395624 - LTR33A LTR ERVL -2 521 7 380 197 0 0 chr5 7690860 7690931 -195394601 + L1MC3 LINE L1 7232 7302 -483 257 105 0 0 chr5 7690931 7690969 -195394563 + Alu SINE Alu 1 38 -264 1558 143 13 0 chr5 7690969 7691207 -195394325 + AluSg/x SINE Alu 69 309 -1 210 71 0 0 chr5 7691209 7691237 -195394295 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 1120 197 0 13 chr5 7691237 7691470 -195394062 + L1MC3 LINE L1 7297 7526 -259 645 237 6 6 chr5 7692442 7692615 -195392917 + L1MA10 LINE L1 6161 6333 -1 2068 249 61 5 chr5 7693370 7693945 -195391587 + MLT1E2 LTR MaLR 13 619 -7 28 78 0 29 chr5 7694260 7694363 -195391169 + AT_rich Low_complexity Low_complexity 1 100 0 535 54 14 0 chr5 7699320 7699406 -195386126 - LTR12 LTR ERV1 -24 690 307 2815 134 22 146 chr5 7699410 7700196 -195385336 - LTR12 LTR ERV1 0 688 1 603 226 31 51 chr5 7700374 7700666 -195384866 - pTR5 LTR ERV1 -1410 1028 743 2078 132 0 3 chr5 7701849 7702136 -195383396 + AluSq SINE Alu 1 286 -27 618 266 86 57 chr5 7702396 7702761 -195382771 + MLT1G LTR MaLR 5 395 -195 187 354 25 56 chr5 7703506 7703667 -195381865 + L2 LINE L2 2660 2815 -499 375 245 141 52 chr5 7703823 7704072 -195381460 + L1M4 LINE L1 5101 5371 -775 204 208 42 0 chr5 7704593 7704641 -195380891 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 2428 86 0 0 chr5 7705711 7706012 -195379520 - AluY SINE Alu -10 301 1 8719 194 17 10 chr5 7706351 7709490 -195376042 - L1PB3 LINE L1 -2 6209 3046 5754 188 32 15 chr5 7709495 7711844 -195373688 - L1PB3 LINE L1 -3753 2450 5 1415 241 34 36 chr5 7711813 7712227 -195373305 - L1PBa LINE L1 -5224 980 568 * 416 101 217 0 chr5 7712277 7712346 -195373186 - THE1B LTR MaLR -280 84 1 845 304 77 29 chr5 7712346 7712929 -195372603 - L1PBa LINE L1 -6085 778 168 2477 101 2 78 chr5 7713143 7713551 -195371981 + MER51B LTR ERV1 1 377 0 351 371 83 19 chr5 7713689 7713953 -195371579 - L2 LINE L2 -9 3263 2983 217 360 105 35 chr5 7714872 7715044 -195370488 + MIR3 SINE MIR 16 199 -9 613 271 81 9 chr5 7715136 7715357 -195370175 - MIR SINE MIR 0 262 26 2173 120 18 20 chr5 7715622 7715964 -195369568 + MER61A LTR ERV1 3 343 0 25 31 0 0 chr5 7717822 7717854 -195367678 + AT_rich Low_complexity Low_complexity 1 32 0 201 154 0 0 chr5 7717990 7718029 -195367503 + (TG)n Simple_repeat Simple_repeat 2 40 0 2011 180 34 24 chr5 7718104 7718393 -195367139 - MSTA LTR MaLR -6 422 126 1326 154 57 124 chr5 7718393 7718626 -195366906 - THE1C LTR MaLR 0 375 179 1878 121 23 4 chr5 7718626 7718891 -195366641 + AluSq SINE Alu 30 299 -14 1326 154 57 124 chr5 7718891 7719059 -195366473 - THE1C LTR MaLR -196 179 1 2011 180 34 24 chr5 7719059 7719186 -195366346 - MSTA LTR MaLR -302 126 2 3805 257 37 37 chr5 7719186 7719554 -195365978 + L1MC1 LINE L1 2526 2893 -3253 1477 151 46 0 chr5 7719554 7719838 -195365694 + L1MA3 LINE L1 6007 6303 -2 3805 257 37 37 chr5 7719838 7721149 -195364383 + L1MC1 LINE L1 2893 4208 -1938 2516 146 41 2 chr5 7721149 7721561 -195363971 - MSTA LTR MaLR 0 428 1 3805 257 37 37 chr5 7721561 7721602 -195363930 + L1MC1 LINE L1 4207 4247 -1899 * 4371 222 54 7 chr5 7721598 7723295 -195362237 + L1MC1 LINE L1 4533 6314 -19 736 203 0 0 chr5 7723383 7723516 -195362016 - FLAM_A SINE Alu 0 133 1 1737 185 125 10 chr5 7723956 7724340 -195361192 - MSTA LTR MaLR 0 428 1 8626 165 12 35 chr5 7724340 7725955 -195359577 - MSTA-int LTR MaLR 0 1580 3 1730 165 132 26 chr5 7725957 7726344 -195359188 - MSTA LTR MaLR 0 428 1 626 314 83 31 chr5 7726738 7727158 -195358374 + L1MC/D LINE L1 354 795 -5926 246 270 124 0 chr5 7727231 7727320 -195358212 - L2 LINE L2 -869 2445 2346 3542 160 50 21 chr5 7727336 7728037 -195357495 - MER50 LTR ERV1 -13 721 1 220 291 13 25 chr5 7728038 7728117 -195357415 - L2 LINE L2 -991 2323 2246 * 237 325 98 41 chr5 7728111 7728305 -195357227 + L2 LINE L2 3008 3212 -101 4454 166 13 1 chr5 7728325 7729147 -195356385 - L1PA16 LINE L1 -6 6160 5329 407 302 41 18 chr5 7729437 7729606 -195355926 + L1MC/D LINE L1 1646 1818 -4722 249 297 24 36 chr5 7729610 7729775 -195355757 + L1MC/D LINE L1 2005 2167 -4554 343 282 64 11 chr5 7730037 7730225 -195355307 + L1MC/D LINE L1 5359 5556 -984 5430 168 22 6 chr5 7730232 7732203 -195353329 + L1PB1 LINE L1 4150 6151 0 572 193 135 66 chr5 7732219 7732463 -195353069 + MER2 DNA MER2_type 85 345 0 4383 170 45 8 chr5 7732465 7733485 -195352047 + L1MA7 LINE L1 5228 6286 -5 389 328 48 39 chr5 7733500 7733729 -195351803 + L1MC/D LINE L1 5960 6190 -2012 242 248 92 43 chr5 7734060 7734201 -195351331 - L1MC/D LINE L1 -721 6107 5960 1779 121 19 29 chr5 7734379 7734686 -195350846 - L1PB1 LINE L1 -8 6143 5840 6156 127 10 52 chr5 7734687 7735787 -195349745 - THE1B-int LTR MaLR -526 1054 1 1840 165 73 3 chr5 7735787 7736127 -195349405 - THE1B LTR MaLR 0 364 1 2193 201 2 16 chr5 7736127 7736644 -195348888 - L1 LINE L1 -1729 4417 3908 5445 234 13 2 chr5 7736660 7738098 -195347434 + L1 LINE L1 2422 3875 -2271 377 197 0 0 chr5 7738099 7738170 -195347362 - MER2 DNA MER2_type -244 101 31 4413 244 89 16 chr5 7738192 7739399 -195346133 - L1MC/D LINE L1 -920 5812 4694 1008 94 29 0 chr5 7739399 7739569 -195345963 + CT-rich Low_complexity Low_complexity 1 175 0 4413 244 89 16 chr5 7739569 7741427 -195344105 - L1MC/D LINE L1 -2038 4694 2424 3753 281 27 23 chr5 7741561 7743124 -195342408 - L1MC/D LINE L1 -4516 2137 935 235 338 0 15 chr5 7743170 7743238 -195342294 - L1M3de LINE L1 -6309 344 278 413 327 19 55 chr5 7743741 7744152 -195341380 - L1M3de LINE L1 -5638 1015 572 749 223 11 11 chr5 7744799 7744974 -195340558 + MER20 DNA MER1_type 45 219 0 879 253 98 7 chr5 7745261 7745566 -195339966 - L1 LINE L1 -1916 4230 3898 1943 205 42 34 chr5 7745569 7745859 -195339673 + L1MA9 LINE L1 5489 5786 -526 249 83 0 0 chr5 7745859 7745895 -195339637 + (TG)n Simple_repeat Simple_repeat 2 37 0 1943 205 42 34 chr5 7745895 7746101 -195339431 + L1MA9 LINE L1 5786 5989 -323 2637 137 24 9 chr5 7748144 7748566 -195336966 - MSTA LTR MaLR 0 428 1 505 303 104 66 chr5 7748675 7749277 -195336255 - L1MCa LINE L1 -4579 2028 1203 939 246 123 81 chr5 7749316 7749834 -195335698 + MLT1G3 LTR MaLR 1 526 -4 379 335 62 52 chr5 7749883 7750208 -195335324 - L1MCa LINE L1 -5078 1338 1011 261 294 96 7 chr5 7751378 7751524 -195334008 + HAL1 LINE L1 45 203 -2304 1945 148 7 3 chr5 7751743 7752053 -195333479 - AluSx SINE Alu -1 311 1 585 178 23 11 chr5 7752133 7752307 -195333225 + GA-rich Low_complexity Low_complexity 1 176 0 301 194 56 56 chr5 7753221 7753329 -195332203 - L1ME LINE L1 -309 5812 5705 364 112 45 79 chr5 7753337 7753426 -195332106 - L1MA7 LINE L1 0 6291 6206 367 270 85 18 chr5 7754814 7754979 -195330553 + MLT1H LTR MaLR 57 210 -339 941 166 0 143 chr5 7755605 7755828 -195329704 + AluJb SINE Alu 84 274 -38 705 196 23 6 chr5 7755830 7756156 -195329376 + GA-rich Low_complexity Low_complexity 1 331 0 1900 198 8 6 chr5 7756623 7756987 -195328545 - MLT1A1 LTR MaLR 0 365 1 347 281 79 26 chr5 7757254 7757368 -195328164 + L2 LINE L2 3193 3312 -1 3082 73 7 0 chr5 7757966 7758377 -195327155 + L1PA7 LINE L1 5740 6153 -1 266 321 50 25 chr5 7758428 7758587 -195326945 - MIR SINE MIR -10 252 90 453 226 21 153 chr5 7758970 7759155 -195326377 - Zaphod DNA AcHobo -2 4029 3908 1469 186 116 3 chr5 7759155 7759482 -195326050 + MLT1A1 LTR MaLR 1 364 -1 453 226 21 153 chr5 7759482 7759636 -195325896 - Zaphod DNA AcHobo -123 3908 3735 805 217 76 38 chr5 7759757 7759869 -195325663 - Zaphod DNA AcHobo -3029 1002 896 2098 127 0 16 chr5 7759869 7760183 -195325349 + AluSx SINE Alu 1 309 -3 805 217 76 38 chr5 7760183 7760544 -195324988 - Zaphod DNA AcHobo -3135 896 511 190 308 0 19 chr5 7762185 7762237 -195323295 - L2 LINE L2 -15 3257 3207 393 312 162 34 chr5 7762364 7762990 -195322542 - L2 LINE L2 -137 3176 2462 536 368 51 21 chr5 7763046 7763758 -195321774 + L2 LINE L2 2361 3093 -220 2276 108 7 0 chr5 7764321 7764627 -195320905 + AluSg SINE Alu 1 308 -2 2045 105 24 14 chr5 7765147 7765442 -195320090 + AluSx SINE Alu 11 308 -4 252 0 0 0 chr5 7765874 7765902 -195319630 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7225 21 0 3 chr5 7765906 7767118 -195318414 - L1PA4 LINE L1 -20 6135 4927 1871 17 13 0 chr5 7767116 7767349 -195318183 - L1PA4 LINE L1 -1708 4438 4203 * 194 380 87 39 chr5 7769096 7769325 -195316207 + MIR SINE MIR 8 247 -15 2077 140 0 0 chr5 7769642 7769950 -195315582 - AluSx SINE Alu -1 311 4 238 237 53 0 chr5 7770027 7770103 -195315429 - L1ME1 LINE L1 -23 6143 6064 242 328 158 28 chr5 7770417 7770664 -195314868 - L3 LINE CR1 -8 1569 1291 21 36 0 0 chr5 7770725 7770753 -195314779 + AT_rich Low_complexity Low_complexity 1 28 0 934 266 145 0 chr5 7770771 7771060 -195314472 - LTR40a LTR ERVL -187 332 2 1190 213 55 22 chr5 7771826 7772219 -195313313 + MER54B LTR ERVL 488 793 0 22 0 0 0 chr5 7774548 7774570 -195310962 + AT_rich Low_complexity Low_complexity 1 22 0 949 152 81 113 chr5 7775468 7775777 -195309755 - AluJo SINE Alu -2 300 2 263 28 28 0 chr5 7775802 7775838 -195309694 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 322 245 6 6 chr5 7775902 7776065 -195309467 + (TA)n Simple_repeat Simple_repeat 2 164 0 2344 111 13 21 chr5 7776146 7776524 -195309008 + THE1C LTR MaLR 1 375 0 4922 55 19 0 chr5 7776812 7777433 -195308099 + L1PA8 LINE L1 5536 6168 -4 1638 172 22 0 chr5 7777521 7777831 -195307701 + AluSx SINE Alu 4 319 0 26 50 0 0 chr5 7777841 7777881 -195307651 + AT_rich Low_complexity Low_complexity 1 40 0 423 312 84 5 chr5 7777900 7778102 -195307430 - MIR SINE MIR -11 251 34 1199 140 82 27 chr5 7778106 7778363 -195307169 - THE1C LTR MaLR 0 375 105 8384 141 54 27 chr5 7778363 7779320 -195306212 - THE1B-int LTR MaLR -9 1571 641 2047 156 11 32 chr5 7779320 7779692 -195305840 - THE1B LTR MaLR 0 364 1 10538 125 11 2 chr5 7779692 7781257 -195304275 - THE1B-int LTR MaLR 0 1580 1 2131 127 11 50 chr5 7781257 7781636 -195303896 - THE1B LTR MaLR 0 364 1 8384 141 54 27 chr5 7781636 7782207 -195303325 - THE1B-int LTR MaLR -938 642 1 1863 132 76 20 chr5 7782207 7782562 -195302970 - THE1C LTR MaLR 0 375 1 206 297 36 9 chr5 7782731 7782842 -195302690 + GA-rich Low_complexity Low_complexity 5 118 0 1319 219 45 31 chr5 7782975 7783335 -195302197 - MLT1A2 LTR MaLR -5 462 5 3426 104 40 2 chr5 7783560 7784081 -195301451 + L1PA13 LINE L1 5618 6158 -5 354 143 0 0 chr5 7784843 7784906 -195300626 - MLT2B1 LTR ERVL 0 520 458 215 180 33 0 chr5 7784913 7784974 -195300558 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 414 196 14 14 chr5 7784989 7785137 -195300395 + (TAGA)n Simple_repeat Simple_repeat 4 151 0 1339 233 23 19 chr5 7785137 7785564 -195299968 - MLT2B1 LTR ERVL -42 478 1 213 219 0 0 chr5 7785629 7785702 -195299830 + (CA)n Simple_repeat Simple_repeat 1 73 0 2500 66 0 0 chr5 7786027 7786330 -195299202 + AluY SINE Alu 1 303 -8 488 172 66 0 chr5 7786384 7786506 -195299026 + L1MA7 LINE L1 6162 6291 0 1019 161 62 45 chr5 7787494 7787737 -195297795 - MER2 DNA MER2_type -51 294 48 195 42 0 0 chr5 7787755 7787779 -195297753 + (TG)n Simple_repeat Simple_repeat 1 24 0 343 278 56 9 chr5 7787811 7787919 -195297613 + MIR SINE MIR 77 189 -73 181 402 0 12 chr5 7788100 7788182 -195297350 - MER5A DNA MER1_type -102 87 7 480 273 18 0 chr5 7788233 7788343 -195297189 + MER5B DNA MER1_type 7 118 -60 742 195 52 108 chr5 7788520 7788864 -195296668 - L1MC3 LINE L1 0 7785 7461 4868 148 30 24 chr5 7788897 7789950 -195295582 - L1PA15 LINE L1 -4 6161 5104 2265 189 8 8 chr5 7789959 7790456 -195295076 + L1PA15 LINE L1 4598 5094 -1052 * 2290 210 56 26 chr5 7790455 7791098 -195294434 - L1MC3 LINE L1 -311 7474 6813 244 36 0 125 chr5 7791540 7791596 -195293936 + (T)n Simple_repeat Simple_repeat 1 49 0 4156 0 0 0 chr5 7791596 7792056 -195293476 - L1HS LINE L1 0 6155 5696 * 11683 24 0 0 chr5 7792055 7793428 -195292104 + L1P LINE L1 3353 4725 -1421 2063 131 0 0 chr5 7793951 7794248 -195291284 + AluSx SINE Alu 1 297 -15 1052 226 8 25 chr5 7794335 7794574 -195290958 + AluJo SINE Alu 65 299 -13 220 156 44 0 chr5 7795068 7795113 -195290419 + GA-rich Low_complexity Low_complexity 2 48 0 7543 28 0 5 chr5 7796136 7797515 -195288017 - L1PA3 LINE L1 0 6155 4818 5913 26 0 0 chr5 7797515 7798216 -195287316 + L1PA3 LINE L1 4143 4843 -1303 1429 192 73 0 chr5 7798519 7798821 -195286711 + L1MC1 LINE L1 6008 6331 -2 22 35 0 0 chr5 7799054 7799083 -195286449 + AT_rich Low_complexity Low_complexity 1 29 0 1541 227 51 17 chr5 7799581 7799688 -195285844 + MLT1A1 LTR MaLR 1 103 -262 2225 116 33 25 chr5 7799688 7800049 -195285483 - THE1B LTR MaLR 0 364 1 1541 227 51 17 chr5 7800049 7800294 -195285238 + MLT1A1 LTR MaLR 103 365 0 336 317 36 48 chr5 7800867 7801076 -195284456 - MIR SINE MIR -10 252 42 23 33 0 0 chr5 7801447 7801477 -195284055 + AT_rich Low_complexity Low_complexity 1 30 0 2513 89 10 79 chr5 7801496 7801901 -195283631 + MER51B LTR ERV1 1 377 0 15070 64 16 8 chr5 7802569 7804498 -195281034 + HERVL LTR ERVL 3368 5310 -344 245 247 0 13 chr5 7804501 7804578 -195280954 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 729 318 108 31 chr5 7804635 7805151 -195280381 + L2 LINE L2 1757 2312 -1002 219 36 0 0 chr5 7805837 7805865 -195279667 + (TTA)n Simple_repeat Simple_repeat 3 30 0 43376 46 4 1 chr5 7805865 7811984 -195273548 - L1PA4 LINE L1 -18 6137 1 22 0 0 0 chr5 7812911 7812933 -195272599 + AT_rich Low_complexity Low_complexity 1 22 0 231 146 0 0 chr5 7814405 7814446 -195271086 + (TG)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr5 7814517 7814544 -195270988 + (TG)n Simple_repeat Simple_repeat 2 28 0 558 240 0 0 chr5 7815739 7815889 -195269643 + CT-rich Low_complexity Low_complexity 3 152 0 253 88 0 0 chr5 7815890 7815924 -195269608 + (TC)n Simple_repeat Simple_repeat 2 35 0 1329 223 62 30 chr5 7817715 7817875 -195267657 + MLT1B LTR MaLR 6 159 -231 2186 100 7 16 chr5 7817875 7818184 -195267348 + AluSc SINE Alu 1 306 -3 1329 223 62 30 chr5 7818184 7818396 -195267136 + MLT1B LTR MaLR 159 390 0 198 261 171 27 chr5 7818430 7818541 -195266991 - L3 LINE CR1 -263 1314 1188 1758 175 25 22 chr5 7818706 7819072 -195266460 - THE1C LTR MaLR -4 371 5 827 317 53 36 chr5 7820806 7821279 -195264253 + MLT1H LTR MaLR 15 495 -54 2406 83 0 16 chr5 7822445 7822757 -195262775 - AluSp SINE Alu -6 307 1 303 353 22 0 chr5 7823411 7823550 -195261982 + L1ME LINE L1 5527 5668 -453 620 224 162 25 chr5 7823830 7824287 -195261245 + L1M4 LINE L1 4899 5429 -752 354 316 14 29 chr5 7824553 7824692 -195260840 - MIR SINE MIR -19 243 107 507 260 0 0 chr5 7824984 7825161 -195260371 + (CTA)n Simple_repeat Simple_repeat 2 178 0 222 304 0 0 chr5 7825185 7825297 -195260235 + (CTA)n Simple_repeat Simple_repeat 1 112 0 2175 225 89 20 chr5 7825297 7825958 -195259574 + Tigger7 DNA MER2_type 1 2573 -14 255 223 160 11 chr5 7826010 7826104 -195259428 - MIR SINE MIR -18 244 137 318 294 55 14 chr5 7826370 7826516 -195259016 + MLT1I LTR MaLR 258 409 0 1836 132 92 7 chr5 7826762 7827043 -195258489 + AluSx SINE Alu 2 306 -6 186 333 30 0 chr5 7827418 7827484 -195258048 - L2 LINE L2 0 3272 3205 22 0 0 0 chr5 7827486 7827508 -195258024 + AT_rich Low_complexity Low_complexity 1 22 0 1216 221 12 24 chr5 7828357 7828610 -195256922 + Tigger3(Golem) DNA MER2_type 2 251 -2778 6547 41 5 0 chr5 7828775 7829583 -195255949 - L1PA4 LINE L1 -820 5326 4515 6930 26 1 1 chr5 7829583 7830394 -195255138 + L1PA4 LINE L1 5339 6154 -1 299 279 60 67 chr5 7831370 7831639 -195253893 + MLT1J LTR MaLR 243 509 -2 26 30 0 0 chr5 7832778 7832811 -195252721 + AT_rich Low_complexity Low_complexity 1 33 0 2971 132 25 36 chr5 7832824 7832945 -195252587 + L1P4 LINE L1 5213 5334 -831 1769 102 87 26 chr5 7832945 7833231 -195252301 + AluSp SINE Alu 5 306 0 2971 132 25 36 chr5 7833231 7833649 -195251883 + L1P4 LINE L1 5334 5758 -407 235 189 19 0 chr5 7833652 7833705 -195251827 + L1PA16 LINE L1 6113 6166 0 387 292 42 28 chr5 7833754 7833981 -195251551 + L1MDb LINE L1 1152 1392 -5004 243 110 64 18 chr5 7833985 7834094 -195251438 + (TA)n Simple_repeat Simple_repeat 1 114 0 1944 118 11 0 chr5 7834262 7834534 -195250998 + AluSx SINE Alu 1 275 -37 360 265 63 63 chr5 7834563 7834752 -195250780 + L1MDb LINE L1 1540 1728 -4678 2142 120 10 98 chr5 7837763 7838162 -195247370 - THE1B LTR MaLR 0 364 1 418 263 10 0 chr5 7838977 7839076 -195246456 + MLT2E LTR ERVL 53 152 -476 1605 142 103 14 chr5 7839388 7839669 -195245863 - AluSx SINE Alu -6 306 1 2670 51 0 0 chr5 7840124 7840435 -195245097 + AluY SINE Alu 1 311 0 1869 291 25 32 chr5 7841145 7841868 -195243664 + L1MEc LINE L1 36 753 -5643 2541 58 9 6 chr5 7842675 7843002 -195242530 - L1PA7 LINE L1 -5 6149 5822 8527 36 0 0 chr5 7843598 7845382 -195240150 - L1PA5 LINE L1 -13 6141 4358 22 0 0 0 chr5 7845977 7845999 -195239533 + AT_rich Low_complexity Low_complexity 1 22 0 221 297 116 43 chr5 7847323 7847461 -195238071 - MIR SINE MIR -49 213 66 180 0 0 0 chr5 7848427 7848447 -195237085 + (T)n Simple_repeat Simple_repeat 1 20 0 2131 65 25 11 chr5 7849927 7850203 -195235329 - AluY SINE Alu -17 294 15 888 58 0 16 chr5 7851254 7851375 -195234157 - L1PA6 LINE L1 0 6154 6036 309 26 0 0 chr5 7852750 7852788 -195232744 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1264 226 25 14 chr5 7852792 7853071 -195232461 - AluJo SINE Alu -30 282 1 2068 224 154 8 chr5 7853814 7854413 -195231119 + MER76 LTR ERV 2 687 -1 2670 239 156 20 chr5 7854738 7855743 -195229789 + L1ME1 LINE L1 5019 6161 -5 442 329 103 26 chr5 7855914 7856224 -195229308 - L2 LINE L2 -4 3309 2976 1677 99 13 115 chr5 7856371 7856711 -195228821 - AluSx SINE Alu 0 308 1 484 15 31 0 chr5 7857529 7857594 -195227938 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2023 141 0 0 chr5 7857792 7858075 -195227457 - AluSx SINE Alu -29 283 1 546 169 0 0 chr5 7858101 7858190 -195227342 + MSTB1 LTR MaLR 294 382 -50 22 0 0 0 chr5 7858211 7858233 -195227299 + AT_rich Low_complexity Low_complexity 1 22 0 512 312 23 23 chr5 7858625 7858840 -195226692 - MIR SINE MIR 0 262 48 23 33 0 0 chr5 7859739 7859769 -195225763 + AT_rich Low_complexity Low_complexity 1 30 0 1476 257 31 21 chr5 7860462 7861073 -195224459 + L1M4 LINE L1 2505 3121 -3025 188 342 72 18 chr5 7861239 7861350 -195224182 - MIR3 SINE MIR -13 195 79 26 88 0 0 chr5 7862490 7862558 -195222974 + AT_rich Low_complexity Low_complexity 1 68 0 1560 211 6 3 chr5 7863910 7864247 -195221285 - L1 LINE L1 -1112 5034 4697 4512 176 37 11 chr5 7864250 7864931 -195220601 + L1PB4 LINE L1 5068 5788 -368 184 59 59 0 chr5 7864931 7864965 -195220567 + (TA)n Simple_repeat Simple_repeat 1 36 0 4512 176 37 11 chr5 7864965 7865341 -195220191 + L1PB4 LINE L1 5788 6153 -3 422 326 77 11 chr5 7865728 7866246 -195219286 + MLT1G1 LTR MaLR 5 588 -2 3441 309 83 28 chr5 7868180 7868486 -195217046 + L2 LINE L2 1132 1420 -1894 1993 140 46 6 chr5 7868486 7868836 -195216696 - THE1B LTR MaLR 0 364 1 3441 309 83 28 chr5 7868836 7869385 -195216147 + L2 LINE L2 1420 1937 -1377 1732 181 40 27 chr5 7869385 7869755 -195215777 + THE1C LTR MaLR 1 375 0 3441 309 83 28 chr5 7869755 7870495 -195215037 + L2 LINE L2 1937 2816 -498 22 70 0 0 chr5 7870543 7870586 -195214946 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr5 7870719 7870754 -195214778 + AT_rich Low_complexity Low_complexity 1 35 0 246 169 89 81 chr5 7871914 7872038 -195213494 - MER54B LTR ERVL -330 463 339 240 319 83 56 chr5 7873280 7873424 -195212108 - L2 LINE L2 -559 2755 2608 1731 249 35 5 chr5 7873653 7874083 -195211449 - MER68 LTR ERV1 0 562 120 2278 168 5 10 chr5 7874204 7874597 -195210935 - ERVL-B3 LTR ERVL -335 5429 5039 2150 151 70 51 chr5 7874595 7875026 -195210506 - ERVL-B3 LTR ERVL -2924 2840 2402 * 3956 226 13 41 chr5 7875030 7876045 -195209487 - MER45B DNA AcHobo -54 986 1 510 85 0 24 chr5 7876174 7876256 -195209276 + L1PA6 LINE L1 6075 6154 0 565 221 17 88 chr5 7877028 7877209 -195208323 + MER68 LTR ERV1 30 197 -365 3432 208 38 5 chr5 7877209 7878534 -195206998 - ERVL-B3 LTR ERVL -3359 2405 996 537 82 0 0 chr5 7878535 7878608 -195206924 - L1PA13 LINE L1 -8 6155 6083 2544 248 61 24 chr5 7878615 7879105 -195206427 - ERVL-B3 LTR ERVL -4754 731 261 2102 191 33 5 chr5 7879105 7879525 -195206007 - MSTB1 LTR MaLR 0 432 1 2544 248 61 24 chr5 7879525 7879538 -195205994 - ERVL-B3 LTR ERVL -5224 261 250 1824 229 46 64 chr5 7879538 7880102 -195205430 - MLT2B3 LTR ERVL 0 554 1 2544 248 61 24 chr5 7880102 7880329 -195205203 - ERVL-B3 LTR ERVL -5235 250 4 2126 161 131 47 chr5 7880329 7880839 -195204693 - MLT2B3 LTR ERVL -1 553 1 587 275 17 78 chr5 7881699 7881994 -195203538 - L1MD2 LINE L1 -13 6346 6070 566 261 6 28 chr5 7882012 7882188 -195203344 - L1MD2 LINE L1 -362 5997 5826 255 244 139 23 chr5 7882413 7882499 -195203033 - L2 LINE L2 -15 3298 3203 203 152 22 0 chr5 7882515 7882561 -195202971 + GA-rich Low_complexity Low_complexity 1 47 0 219 88 0 0 chr5 7883399 7883433 -195202099 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 603 234 21 0 chr5 7883653 7883794 -195201738 + MER20 DNA MER1_type 76 219 0 1317 216 65 23 chr5 7883866 7884217 -195201315 - MLT1A2 LTR MaLR -4 370 5 223 343 33 47 chr5 7885044 7885257 -195200275 + L2 LINE L2 1693 1902 -1412 210 240 40 0 chr5 7885808 7885858 -195199674 + MER91 DNA MER1_type 75 126 -14 315 320 135 38 chr5 7885872 7886573 -195198959 + L2 LINE L2 2469 3262 -10 210 71 0 0 chr5 7888110 7888138 -195197394 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr5 7889100 7889136 -195196396 + AT_rich Low_complexity Low_complexity 1 36 0 30 45 0 0 chr5 7889255 7889299 -195196233 + AT_rich Low_complexity Low_complexity 1 44 0 26 30 0 0 chr5 7890298 7890331 -195195201 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 7890368 7890391 -195195141 + AT_rich Low_complexity Low_complexity 1 23 0 292 146 135 67 chr5 7890610 7890699 -195194833 + L1PA16 LINE L1 6072 6166 0 248 28 56 0 chr5 7891705 7891741 -195193791 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 423 342 53 22 chr5 7891746 7891971 -195193561 + MIR SINE MIR 28 259 -3 860 351 114 24 chr5 7891979 7893020 -195192512 - L2 LINE L2 -35 3278 2116 270 0 0 0 chr5 7893020 7893050 -195192482 + (CAA)n Simple_repeat Simple_repeat 2 31 0 860 351 114 24 chr5 7893050 7893191 -195192341 - L2 LINE L2 -1197 2116 1989 1076 76 0 0 chr5 7893197 7893329 -195192203 + AluY SINE Alu 3 134 -177 2449 71 0 3 chr5 7893331 7893639 -195191893 + AluY SINE Alu 3 309 -2 303 204 151 11 chr5 7893645 7893738 -195191794 - L2 LINE L2 -1331 1983 1878 21 0 0 0 chr5 7894348 7894369 -195191163 + AT_rich Low_complexity Low_complexity 1 21 0 1196 213 84 58 chr5 7894434 7894814 -195190718 + MLT1B LTR MaLR 1 390 0 26 93 0 0 chr5 7894843 7894918 -195190614 + AT_rich Low_complexity Low_complexity 1 75 0 231 308 57 6 chr5 7896072 7896231 -195189301 + L1M4 LINE L1 4534 4700 -1446 180 300 20 0 chr5 7896345 7896395 -195189137 + MIR SINE MIR 8 58 -204 844 220 38 19 chr5 7896861 7897070 -195188462 + MER20 DNA MER1_type 7 219 0 2258 64 16 13 chr5 7897275 7897589 -195187943 - L1PA5 LINE L1 -1 6153 5839 1076 161 0 0 chr5 7899040 7899202 -195186330 - AluSg/x SINE Alu -14 298 137 1905 114 54 14 chr5 7899230 7899527 -195186005 - AluSc SINE Alu 0 309 1 234 227 61 0 chr5 7900201 7900267 -195185265 - MER5B DNA MER1_type 0 178 109 24 0 0 0 chr5 7900368 7900392 -195185140 + AT_rich Low_complexity Low_complexity 1 24 0 4055 127 43 1 chr5 7901524 7902263 -195183269 - L1PA16 LINE L1 0 6163 5355 588 107 0 0 chr5 7902263 7902347 -195183185 - AluS SINE Alu -228 84 1 1675 215 67 0 chr5 7902351 7902797 -195182735 - L1PA16 LINE L1 -783 5363 4888 296 309 103 7 chr5 7902927 7903063 -195182469 - MIR SINE MIR -61 201 53 235 258 21 86 chr5 7903095 7903188 -195182344 + L2 LINE L2 3169 3255 -17 224 333 15 68 chr5 7903466 7903598 -195181934 - L2 LINE L2 0 3272 3148 468 323 22 36 chr5 7903815 7904038 -195181494 + MIR SINE MIR 5 224 -38 1520 235 11 16 chr5 7905014 7905392 -195180140 + L1MD1 LINE L1 5740 6115 -127 320 266 11 57 chr5 7906271 7906448 -195179084 + L1M4 LINE L1 3687 3855 -2291 200 294 0 16 chr5 7906456 7906582 -195178950 + (CATA)n Simple_repeat Simple_repeat 1 124 0 256 236 18 0 chr5 7906765 7906875 -195178657 + (TA)n Simple_repeat Simple_repeat 1 112 0 390 344 59 43 chr5 7906995 7907370 -195178162 - L1MC/D LINE L1 -2000 5808 5428 32 26 0 0 chr5 7908124 7908163 -195177369 + AT_rich Low_complexity Low_complexity 1 39 0 4825 165 14 19 chr5 7908647 7909639 -195175893 + L1PA16 LINE L1 5151 6137 -29 2205 170 29 12 chr5 7909641 7910031 -195175501 + MSTA LTR MaLR 4 403 -25 15867 66 10 0 chr5 7910031 7912923 -195172609 - L1PA6 LINE L1 0 6154 3246 2205 170 29 12 chr5 7912923 7912950 -195172582 + MSTA LTR MaLR 403 428 0 3435 118 84 16 chr5 7913767 7914317 -195171215 - LTR18B LTR ERVL -27 587 1 1696 148 22 94 chr5 7914623 7914802 -195170730 + THE1C LTR MaLR 1 136 -239 2080 130 3 0 chr5 7914802 7915102 -195170430 - AluSq SINE Alu -12 301 1 1696 148 22 94 chr5 7915102 7915326 -195170206 + THE1C LTR MaLR 136 375 0 288 0 0 0 chr5 7916384 7916416 -195169116 + (CA)n Simple_repeat Simple_repeat 1 32 0 2130 151 81 3 chr5 7916427 7916810 -195168722 - MLT2C2 LTR ERVL -48 416 4 256 247 78 13 chr5 7916814 7916891 -195168641 - MIR SINE MIR -150 112 31 1080 228 30 0 chr5 7917170 7917407 -195168125 - L1PB4 LINE L1 -1191 4955 4712 4042 190 23 8 chr5 7917410 7918493 -195167039 + L1PB4 LINE L1 4953 6047 -109 2192 207 47 11 chr5 7918516 7919052 -195166480 - L1MB7 LINE L1 -70 6612 6058 513 220 97 113 chr5 7919052 7919308 -195166224 - MLT1D LTR MaLR -196 271 1 374 229 28 50 chr5 7919308 7919487 -195166045 - L1MB7 LINE L1 -2729 3915 3741 274 261 0 0 chr5 7919472 7919537 -195165995 - L1MB7 LINE L1 -6461 81 17 * 2116 80 0 0 chr5 7920843 7921119 -195164413 - AluY SINE Alu -4 307 32 678 149 53 0 chr5 7925175 7925289 -195160243 - L1PA15 LINE L1 -489 5676 5557 2831 124 16 2 chr5 7925289 7925741 -195159791 + L1PA15 LINE L1 5705 6163 -2 3714 52 2 0 chr5 7925821 7926286 -195159246 - L1PA5 LINE L1 -5 6149 5684 264 318 35 0 chr5 7927164 7927249 -195158283 + MIR SINE MIR 48 135 -127 2248 183 48 101 chr5 7927261 7927336 -195158196 + MLT2B3 LTR ERVL 2 79 -475 1106 71 0 22 chr5 7927336 7927519 -195158013 + (TG)n Simple_repeat Simple_repeat 2 180 0 2248 183 48 101 chr5 7927519 7927566 -195157966 + MLT2B3 LTR ERVL 79 127 -427 1118 67 11 11 chr5 7927566 7927746 -195157786 + (TG)n Simple_repeat Simple_repeat 1 180 0 2248 183 48 101 chr5 7927746 7928152 -195157380 + MLT2B3 LTR ERVL 127 500 -54 416 51 17 0 chr5 7928152 7928211 -195157321 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 2248 183 48 101 chr5 7928211 7928264 -195157268 + MLT2B3 LTR ERVL 500 554 0 197 392 108 0 chr5 7928437 7928567 -195156965 + L2 LINE L2 3127 3270 -2 1447 39 6 0 chr5 7929079 7929257 -195156275 - L1PA4 LINE L1 -2 6153 5975 1578 180 20 8 chr5 7930514 7930925 -195154607 - L1M LINE L1 -743 5403 5008 * 1936 223 31 119 chr5 7930919 7931681 -195153851 + L1MA6 LINE L1 5424 6118 -182 25 31 0 0 chr5 7931788 7931820 -195153712 + AT_rich Low_complexity Low_complexity 1 32 0 203 208 0 19 chr5 7932128 7932181 -195153351 + (TTTAA)n Simple_repeat Simple_repeat 5 56 0 23 54 0 0 chr5 7933590 7933627 -195151905 + AT_rich Low_complexity Low_complexity 1 37 0 1929 187 37 8 chr5 7933798 7934177 -195151355 - MLT1B LTR MaLR 0 390 1 284 75 0 0 chr5 7934215 7934255 -195151277 - L1MA9 LINE L1 -39 6273 6234 478 78 0 111 chr5 7934255 7934294 -195151238 + MADE1 DNA Mariner 1 26 -54 1018 52 22 0 chr5 7934294 7934429 -195151103 - L1PA4 LINE L1 -1 6154 6017 478 78 0 111 chr5 7934429 7934479 -195151053 + MADE1 DNA Mariner 26 80 0 772 227 62 27 chr5 7934479 7934739 -195150793 - L1MA9 LINE L1 -83 6229 5961 844 61 0 0 chr5 7936197 7936311 -195149221 + L1PA4 LINE L1 6042 6155 0 452 312 144 10 chr5 7937267 7937565 -195147967 - LTR16A LTR ERVL -88 362 25 232 182 23 0 chr5 7937569 7937613 -195147919 - MLT2D LTR ERVL 0 554 510 1017 216 155 4 chr5 7937644 7937908 -195147624 - MLT2D LTR ERVL -19 395 92 1230 260 38 30 chr5 7939148 7939675 -195145857 + L1M4 LINE L1 4794 5324 -822 492 219 41 41 chr5 7941636 7941805 -195143727 + MER89 LTR ERV1 1 169 -390 1288 145 94 86 chr5 7942469 7942841 -195142691 - THE1C LTR MaLR 0 375 1 1809 227 45 16 chr5 7943810 7944255 -195141277 - MLT1C LTR MaLR -9 458 1 4667 193 10 8 chr5 7944368 7945285 -195140247 - MER49 LTR ERV1 0 923 5 21 82 0 0 chr5 7946850 7946899 -195138633 + AT_rich Low_complexity Low_complexity 1 49 0 419 243 27 18 chr5 7947069 7947180 -195138352 + MER81 DNA DNA 1 112 -2 1254 225 34 57 chr5 7948781 7949169 -195136363 - MER67C LTR ERV1 -8 506 168 2183 131 75 40 chr5 7949169 7949597 -195135935 - MER65A LTR ERV1 -2 443 1 1254 225 34 57 chr5 7949597 7949762 -195135770 - MER67C LTR ERV1 -346 168 1 224 167 21 0 chr5 7949904 7949952 -195135580 + (TA)n Simple_repeat Simple_repeat 1 49 0 225 65 0 0 chr5 7949968 7949999 -195135533 + (TC)n Simple_repeat Simple_repeat 2 32 0 263 273 107 9 chr5 7950883 7950998 -195134534 + MIR SINE MIR 31 138 -70 304 242 10 99 chr5 7952104 7952165 -195133367 - MIR SINE MIR -55 207 142 2203 225 87 21 chr5 7952165 7952774 -195132758 + MLT1E1 LTR MaLR 5 653 -1 304 242 10 99 chr5 7952774 7952874 -195132658 - MIR SINE MIR -120 142 59 229 300 0 12 chr5 7952975 7953055 -195132477 + (TA)n Simple_repeat Simple_repeat 1 79 0 415 338 44 44 chr5 7953137 7953405 -195132127 + L1M4 LINE L1 3544 3814 -2332 1545 180 47 68 chr5 7953405 7953759 -195131773 + LTR52 LTR ERVL 1 346 -75 261 0 0 0 chr5 7953759 7953788 -195131744 + (TG)n Simple_repeat Simple_repeat 2 30 0 1545 180 47 68 chr5 7953788 7953861 -195131671 + LTR52 LTR ERVL 346 419 -2 415 338 44 44 chr5 7953861 7953909 -195131623 + L1M4 LINE L1 3813 3860 -2286 272 212 30 20 chr5 7954331 7954430 -195131102 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 197 86 57 0 chr5 7954465 7954500 -195131032 + (TCTA)n Simple_repeat Simple_repeat 1 37 0 364 241 0 0 chr5 7954721 7954808 -195130724 - MLT1A1 LTR MaLR 0 390 304 3782 66 23 7 chr5 7954947 7955589 -195129943 - L1PA7 LINE L1 -367 5787 5139 2828 59 6 0 chr5 7955589 7955938 -195129594 + L1PA7 LINE L1 5789 6146 -8 878 215 37 45 chr5 7956375 7956617 -195128915 - MLT1A1 LTR MaLR -125 240 1 218 132 19 0 chr5 7957670 7957723 -195127809 + (TG)n Simple_repeat Simple_repeat 1 54 0 228 342 111 8 chr5 7958412 7958529 -195127003 + MIR SINE MIR 18 146 -62 306 0 0 0 chr5 7958584 7958618 -195126914 + (TG)n Simple_repeat Simple_repeat 2 35 0 2029 144 46 25 chr5 7959608 7959975 -195125557 - THE1C LTR MaLR 0 375 1 278 194 14 0 chr5 7960071 7960143 -195125389 + CT-rich Low_complexity Low_complexity 1 73 0 265 271 90 66 chr5 7960213 7960335 -195125197 + MER63 DNA MER1_type 2 752 -84 229 238 62 12 chr5 7960335 7960415 -195125117 + MER63 DNA MER1_type 977 1060 0 202 344 0 33 chr5 7961568 7961719 -195123813 + G-rich Low_complexity Low_complexity 3 148 0 1580 150 48 107 chr5 7962116 7962556 -195122976 - MLT2D LTR ERVL 0 414 1 1728 209 105 38 chr5 7964451 7965030 -195120502 - L1MB8 LINE L1 -290 5888 5271 182 345 53 18 chr5 7965940 7966053 -195119479 - MIR SINE MIR -33 229 113 1675 214 33 28 chr5 7967761 7967956 -195117576 + MSTB1 LTR MaLR 5 198 -234 2371 84 3 3 chr5 7967956 7968255 -195117277 + AluSq SINE Alu 1 299 -14 1675 214 33 28 chr5 7968255 7968485 -195117047 + MSTB1 LTR MaLR 198 432 0 241 269 156 25 chr5 7968796 7968956 -195116576 - MIR SINE MIR -34 228 48 379 325 41 47 chr5 7969003 7969172 -195116360 + L2 LINE L2 3103 3270 -2 198 103 0 0 chr5 7970460 7970489 -195115043 + (TTA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr5 7972331 7972360 -195113172 + AT_rich Low_complexity Low_complexity 1 29 0 1948 139 27 17 chr5 7972417 7972711 -195112821 - AluSx SINE Alu -15 297 1 194 258 237 10 chr5 7973095 7973192 -195112340 - L2 LINE L2 -2 3270 3152 329 261 11 22 chr5 7974232 7974324 -195111208 + L1MC4 LINE L1 6613 6703 -1339 643 92 55 9 chr5 7974328 7974546 -195110986 + (TA)n Simple_repeat Simple_repeat 1 228 0 559 26 37 90 chr5 7974572 7974761 -195110771 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 494 85 73 6 chr5 7974737 7974902 -195110630 + (TA)n Simple_repeat Simple_repeat 1 176 0 * 344 335 133 47 chr5 7975384 7975957 -195109575 - L2 LINE L2 -1145 2169 1548 1237 211 8 0 chr5 7976637 7976903 -195108629 + L1MD3 LINE L1 7728 7995 0 334 264 0 0 chr5 7976942 7977033 -195108499 + (CA)n Simple_repeat Simple_repeat 2 92 0 1056 286 48 45 chr5 7977204 7977743 -195107789 + MLT1F LTR MaLR 2 542 0 399 305 36 0 chr5 7977800 7977946 -195107586 - MLT1F LTR MaLR -262 280 133 240 295 8 23 chr5 7977978 7978107 -195107425 + MLT1F-int LTR MaLR 24 150 -1221 252 270 8 79 chr5 7978282 7978408 -195107124 + MLT1F-int LTR MaLR 442 558 -813 2064 117 0 11 chr5 7979157 7979439 -195106093 - AluSg SINE Alu 0 310 32 1573 210 40 101 chr5 7979657 7980210 -195105322 - LTR40a LTR ERVL 0 519 1 261 280 40 0 chr5 7980269 7980344 -195105188 + MLT1F LTR MaLR 1 78 -464 844 253 65 11 chr5 7980381 7980642 -195104890 + MLT1F LTR MaLR 155 429 -113 468 376 105 0 chr5 7980730 7980988 -195104544 - L3 LINE CR1 -13 1564 1280 229 339 0 0 chr5 7981807 7981872 -195103660 - MIR SINE MIR -103 105 41 301 321 92 16 chr5 7982664 7982848 -195102684 - L2 LINE L2 -604 2710 2513 2173 123 7 3 chr5 7983146 7983455 -195102077 - AluSx SINE Alu -2 310 1 537 187 16 82 chr5 7984085 7984267 -195101265 + MER114 LTR ERV 1 170 -478 606 262 143 6 chr5 7984301 7984637 -195100895 + MER114 LTR ERV 267 648 0 1517 246 54 67 chr5 7985204 7985640 -195099892 + L1M4 LINE L1 3568 3991 -2155 180 0 0 0 chr5 7985640 7985660 -195099872 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1517 246 54 67 chr5 7985660 7985988 -195099544 + L1M4 LINE L1 3991 4322 -1824 21 36 0 0 chr5 7986007 7986035 -195099497 + AT_rich Low_complexity Low_complexity 1 28 0 1200 198 31 0 chr5 7986058 7986348 -195099184 - L1MC2 LINE L1 -5 7764 6150 7023 211 33 10 chr5 7986369 7986423 -195099109 - L1MC3 LINE L1 -461 7324 7273 2209 119 48 20 chr5 7986423 7986775 -195098757 - THE1B LTR MaLR -2 362 1 7023 211 33 10 chr5 7986775 7988458 -195097074 - L1MC3 LINE L1 -512 7273 5547 34 55 0 0 chr5 7989287 7989342 -195096190 + AT_rich Low_complexity Low_complexity 1 55 0 204 295 33 0 chr5 7989345 7989406 -195096126 - MIR SINE MIR -108 154 92 2107 136 3 0 chr5 7989661 7989971 -195095561 - AluSx SINE Alu -1 311 1 21 36 0 0 chr5 7990132 7990160 -195095372 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 7991914 7991941 -195093591 + AT_rich Low_complexity Low_complexity 1 27 0 413 252 119 13 chr5 7992306 7992457 -195093075 + MLT1E LTR MaLR 1 167 -426 581 249 94 133 chr5 7992474 7992932 -195092600 + MLT1E LTR MaLR 110 549 -105 375 23 0 0 chr5 7993774 7993818 -195091714 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 103 0 0 chr5 7994000 7994029 -195091503 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 * 290 89 0 54 chr5 7994027 7994083 -195091449 + (GAAAA)n Simple_repeat Simple_repeat 1 53 0 387 0 0 0 chr5 7994436 7994479 -195091053 + (CA)n Simple_repeat Simple_repeat 2 44 0 2400 149 3 3 chr5 7995641 7996016 -195089516 - THE1C LTR MaLR 0 375 1 226 191 21 21 chr5 7996382 7996429 -195089103 - MER45A DNA AcHobo 0 178 132 2878 183 26 9 chr5 7996462 7996543 -195088989 - L1MA9 LINE L1 -295 6017 5939 273 57 0 0 chr5 7996543 7996578 -195088954 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2878 183 26 9 chr5 7996578 7997080 -195088452 - L1MA9 LINE L1 -373 5939 5424 1111 198 38 0 chr5 7997070 7997308 -195088224 + L1MA9 LINE L1 6030 6276 -36 * 242 275 11 22 chr5 7997322 7997413 -195088119 - MER45R DNA AcHobo -35 1546 1457 1000 189 0 0 chr5 7997416 7997585 -195087947 - AluSg/x SINE Alu -19 291 123 3909 200 35 4 chr5 7997651 7998572 -195086960 - MER45R DNA AcHobo -98 1483 535 3386 139 46 56 chr5 7998966 7999591 -195085941 + LTR31 LTR ERV1 1 619 0 776 275 77 77 chr5 8000657 8001148 -195084384 - LTR33A LTR ERVL -2 521 31 2103 118 0 7 chr5 8001233 8001529 -195084003 + AluSg SINE Alu 1 294 -16 973 88 0 0 chr5 8001616 8001741 -195083791 - AluSg/x SINE Alu -14 298 174 1059 237 5 0 chr5 8001792 8002011 -195083521 + MLT1B LTR MaLR 1 220 -170 414 125 0 0 chr5 8002010 8002066 -195083466 + MLT1B LTR MaLR 335 390 0 * 189 0 0 0 chr5 8002071 8002092 -195083440 + (T)n Simple_repeat Simple_repeat 1 21 0 1521 248 49 31 chr5 8003530 8004082 -195081450 - L1ME2 LINE L1 -19 6145 5584 389 183 14 0 chr5 8004121 8004192 -195081340 - L1MC3 LINE L1 -836 6949 6878 3185 250 45 56 chr5 8004198 8005903 -195079629 - L1ME2 LINE L1 -2111 4035 2480 620 145 17 25 chr5 8005760 8006002 -195079530 - L1MA7 LINE L1 0 6291 5946 * 806 257 29 20 chr5 8006023 8006366 -195079166 - L1ME2 LINE L1 -3652 2494 2149 684 195 38 0 chr5 8006552 8006711 -195078821 + L1MB7 LINE L1 6011 6175 -9 277 325 25 0 chr5 8008025 8008105 -195077427 + MIR SINE MIR 26 107 -155 3070 59 0 0 chr5 8008257 8008647 -195076885 + L1PA8 LINE L1 5783 6172 0 829 292 49 49 chr5 8008725 8009132 -195076400 - L1ME3A LINE L1 -41 6129 5723 331 309 102 12 chr5 8009234 8009436 -195076096 - MLT1E LTR MaLR -362 180 1 276 295 33 16 chr5 8009499 8009621 -195075911 - MER104 DNA Tc2 -56 124 1 308 284 140 34 chr5 8010185 8010449 -195075083 + L1ME4a LINE L1 5759 6050 -71 308 306 145 30 chr5 8010864 8011319 -195074213 + L1ME LINE L1 5321 5829 -333 566 282 30 30 chr5 8011397 8011631 -195073901 + HAL1 LINE L1 1248 1481 -1026 1350 194 90 4 chr5 8011634 8011912 -195073620 + AluJo SINE Alu 1 302 -10 1317 283 110 41 chr5 8011912 8012696 -195072836 + HAL1 LINE L1 1570 2407 -100 55 86 0 0 chr5 8012737 8012876 -195072656 + AT_rich Low_complexity Low_complexity 1 139 0 535 236 43 7 chr5 8013990 8014130 -195071402 + LTR52 LTR ERVL 277 421 0 2372 180 40 67 chr5 8017193 8018036 -195067496 - MER21A LTR ERV1 -1 930 1 399 223 8 40 chr5 8020094 8020226 -195065306 + L1MB7 LINE L1 6058 6182 -1 708 218 81 0 chr5 8020866 8021040 -195064492 - MER5A DNA MER1_type -1 188 1 207 88 0 0 chr5 8021615 8021649 -195063883 + (T)n Simple_repeat Simple_repeat 1 34 0 1273 113 9 5 chr5 8021867 8022079 -195063453 - Tigger7 DNA MER2_type -40 2447 2235 267 214 0 18 chr5 8022077 8022133 -195063399 - Tigger7 DNA MER2_type -284 55 1 * 23 0 0 0 chr5 8022220 8022243 -195063289 + AT_rich Low_complexity Low_complexity 1 23 0 367 215 99 25 chr5 8022694 8022815 -195062717 - MER5A DNA MER1_type -1 188 59 24 32 0 0 chr5 8022941 8022972 -195062560 + AT_rich Low_complexity Low_complexity 1 31 0 2650 35 0 10 chr5 8023151 8023465 -195062067 + AluY SINE Alu 1 311 0 22 35 0 0 chr5 8023527 8023556 -195061976 + AT_rich Low_complexity Low_complexity 1 29 0 1292 128 0 0 chr5 8024199 8024386 -195061146 + AluSg/x SINE Alu 126 312 0 315 0 0 0 chr5 8024558 8024593 -195060939 + (CA)n Simple_repeat Simple_repeat 2 36 0 34 84 0 0 chr5 8024627 8024710 -195060822 + AT_rich Low_complexity Low_complexity 1 83 0 1375 136 80 31 chr5 8024987 8025273 -195060259 + THE1C LTR MaLR 1 300 -75 3739 164 50 10 chr5 8025296 8025977 -195059555 + L1P3 LINE L1 21 728 -5733 459 228 63 16 chr5 8025977 8026104 -195059428 + MLT2F LTR ERVL 531 663 0 1228 278 33 14 chr5 8026104 8026525 -195059007 + L1ME2 LINE L1 5727 6155 -9 285 257 14 0 chr5 8026527 8026601 -195058931 + L1MC4a LINE L1 6351 6425 -1383 * 1246 226 104 44 chr5 8026592 8027119 -195058413 + L1MC4 LINE L1 7483 8041 -1 266 329 129 34 chr5 8027711 8028023 -195057509 - L2 LINE L2 -243 3070 2729 246 136 0 0 chr5 8028327 8028371 -195057161 + (CCA)n Simple_repeat Simple_repeat 1 44 0 213 290 0 10 chr5 8028379 8028479 -195057053 + (CAA)n Simple_repeat Simple_repeat 2 100 0 3487 80 4 6 chr5 8028974 8029470 -195056062 + L1PA8 LINE L1 5675 6169 0 2060 146 132 5 chr5 8029881 8030259 -195055273 + MSTA LTR MaLR 3 428 0 9571 121 2 0 chr5 8030549 8032808 -195052724 + L1PA8 LINE L1 3908 6169 -3 25 0 0 0 chr5 8032815 8032840 -195052692 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr5 8033020 8033063 -195052469 + AT_rich Low_complexity Low_complexity 1 43 0 315 346 12 0 chr5 8033356 8033518 -195052014 + T-rich Low_complexity Low_complexity 3 166 0 819 231 29 0 chr5 8033999 8034172 -195051360 - MER45A DNA AcHobo 0 178 1 587 353 39 24 chr5 8034355 8034689 -195050843 + MLT1J LTR MaLR 17 355 -156 335 255 32 21 chr5 8034861 8034955 -195050577 + MLT1L LTR MaLR 311 405 -210 207 0 0 0 chr5 8035017 8035040 -195050492 + (A)n Simple_repeat Simple_repeat 1 23 0 2251 85 0 53 chr5 8035968 8036286 -195049246 - AluSp SINE Alu -12 301 1 2295 137 11 8 chr5 8036286 8036644 -195048888 - THE1B LTR MaLR -5 359 1 724 260 29 0 chr5 8038204 8038377 -195047155 - MER45A DNA AcHobo 0 178 1 2057 158 97 8 chr5 8039131 8039524 -195046008 + MSTA LTR MaLR 1 428 0 192 318 45 27 chr5 8040572 8040682 -195044850 - L2 LINE L2 0 3272 3161 375 288 101 14 chr5 8040843 8040982 -195044550 + MIR SINE MIR 95 245 -17 2046 180 26 0 chr5 8042336 8042714 -195042818 - MLT1B LTR MaLR 0 390 3 2179 104 0 0 chr5 8042773 8043088 -195042444 - AluY SINE Alu 0 315 1 764 161 0 36 chr5 8043159 8043327 -195042205 - Tigger7 DNA MER2_type -96 2395 2234 263 259 0 0 chr5 8043322 8043376 -195042156 - Tigger7 DNA MER2_type -2432 55 2 * 3245 249 95 40 chr5 8043377 8045878 -195039654 - L1 LINE L1 -2816 4290 1926 408 20 0 0 chr5 8045878 8045927 -195039605 + (TG)n Simple_repeat Simple_repeat 2 50 0 3245 249 95 40 chr5 8045927 8046068 -195039464 - L1 LINE L1 -5180 1926 1794 1584 176 70 25 chr5 8046068 8046427 -195039105 + THE1C LTR MaLR 1 375 0 3245 249 95 40 chr5 8046427 8046868 -195038664 - L1 LINE L1 -5312 1794 1383 201 220 20 0 chr5 8047396 8047446 -195038086 - MER5B DNA MER1_type -127 51 1 23 0 0 0 chr5 8047898 8047921 -195037611 + AT_rich Low_complexity Low_complexity 1 23 0 4783 172 27 5 chr5 8049734 8050617 -195034915 + MER4D LTR ERV1 1 903 0 197 309 109 48 chr5 8051213 8051378 -195034154 + MIR SINE MIR 7 181 -81 1777 168 10 30 chr5 8051873 8052177 -195033355 + AluJb SINE Alu 3 300 -12 2795 200 20 75 chr5 8052369 8053100 -195032432 + LTR8 LTR ERV1 1 691 0 3644 174 13 14 chr5 8053223 8053929 -195031603 - MER67C LTR ERV1 -4 706 2 2022 136 95 3 chr5 8054030 8054511 -195031021 + LTR49 LTR ERV1 1 595 0 22 0 0 0 chr5 8054589 8054611 -195030921 + AT_rich Low_complexity Low_complexity 1 22 0 6125 156 13 8 chr5 8055710 8056782 -195028750 - Tigger2 DNA MER2_type -1 2717 1640 711 220 7 0 chr5 8057385 8057526 -195028006 - MER57B-int LTR ERV1 -1443 6094 5953 552 143 10 10 chr5 8057540 8057638 -195027894 + MER4A LTR ERV1 1 98 -566 1560 144 157 82 chr5 8057638 8058014 -195027518 + MER4A LTR ERV1 261 664 0 663 358 17 33 chr5 8058017 8058709 -195026823 - MER57B-int LTR ERV1 -1874 2773 2093 * 1410 255 17 43 chr5 8058680 8059163 -195026369 - MER57B-int LTR ERV1 -1791 5746 5277 254 359 0 0 chr5 8059241 8059319 -195026213 - MER57B-int LTR ERV1 -2940 3861 3784 265 315 0 27 chr5 8060630 8060741 -195024791 - MER57B-int LTR ERV1 -4345 3411 3304 207 0 0 0 chr5 8061966 8061989 -195023543 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2023 142 7 0 chr5 8062723 8063018 -195022514 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 8063018 8063041 -195022491 + AT_rich Low_complexity Low_complexity 1 23 0 2544 69 0 0 chr5 8063155 8063459 -195022073 + AluY SINE Alu 1 304 -7 369 277 44 38 chr5 8063637 8063796 -195021736 - MER57B-int LTR ERV1 -7375 162 3 1313 224 46 53 chr5 8063818 8064199 -195021333 - MER57B LTR ERV1 -5 429 50 2332 129 8 21 chr5 8064199 8064579 -195020953 + THE1C LTR MaLR 1 375 0 1313 224 46 53 chr5 8064579 8064629 -195020903 - MER57B LTR ERV1 -384 50 1 21 0 0 0 chr5 8064935 8064956 -195020576 + AT_rich Low_complexity Low_complexity 1 21 0 2173 112 23 3 chr5 8065140 8065473 -195020059 - AluSg SINE Alu 0 339 1 387 363 29 29 chr5 8066074 8066245 -195019287 - MIR3 SINE MIR -22 186 16 207 161 0 0 chr5 8066318 8066349 -195019183 + (ATG)n Simple_repeat Simple_repeat 3 33 0 202 305 0 37 chr5 8067040 8067122 -195018410 + MIR SINE MIR 153 231 -31 9370 122 18 7 chr5 8067474 8068939 -195016593 + MER52-int LTR ERV1 5611 7091 0 924 234 17 80 chr5 8068944 8069648 -195015884 + MER52A LTR ERV1 283 1459 -147 403 272 5 60 chr5 8069628 8069812 -195015720 + MER52A LTR ERV1 1582 1755 0 * 645 296 68 27 chr5 8069970 8070338 -195015194 + L1ME3A LINE L1 3034 3416 -2730 1422 210 0 11 chr5 8070342 8070618 -195014914 - MER68 LTR ERV1 0 562 290 239 321 36 0 chr5 8070632 8070769 -195014763 + L1ME3A LINE L1 3503 3644 -2502 2038 155 11 6 chr5 8070896 8071251 -195014281 + THE1C LTR MaLR 19 375 0 9261 127 40 41 chr5 8071251 8072833 -195012699 + THE1C-int LTR MaLR 1 1580 0 2386 127 19 3 chr5 8072833 8073202 -195012330 + THE1C LTR MaLR 1 375 0 431 304 43 58 chr5 8073223 8073877 -195011655 + L1ME3A LINE L1 4062 4705 -1441 353 311 96 33 chr5 8073930 8074358 -195011174 + L1ME3A LINE L1 5404 5858 -312 1336 219 52 11 chr5 8074671 8075037 -195010495 + L1MC4 LINE L1 6699 7079 -963 515 267 0 0 chr5 8075040 8075175 -195010357 + L1MC4a LINE L1 7160 7294 -514 531 283 98 4 chr5 8075249 8075493 -195010039 + L1MC4 LINE L1 7632 7898 -144 521 306 0 8 chr5 8075847 8075981 -195009551 + MIR SINE MIR 20 152 -110 1104 148 136 47 chr5 8075985 8076302 -195009230 + MER4A LTR ERV1 1 345 -319 489 142 242 8 chr5 8076434 8076554 -195008978 + MER4C LTR ERV1 300 447 -18 1261 277 124 15 chr5 8076622 8077163 -195008369 - MER90 LTR ERV1 -2 573 11 2366 66 0 3 chr5 8078120 8078408 -195007124 + AluY SINE Alu 1 287 -24 622 258 148 9 chr5 8078433 8078662 -195006870 - MIR SINE MIR 0 262 2 22 0 0 0 chr5 8078895 8078917 -195006615 + AT_rich Low_complexity Low_complexity 1 22 0 1813 148 34 14 chr5 8079031 8079328 -195006204 - AluJb SINE Alu -9 303 1 747 248 96 11 chr5 8079368 8079650 -195005882 + L2 LINE L2 1812 2117 -1197 449 211 159 9 chr5 8079672 8079904 -195005628 - MER97a DNA MER1_type? -42 852 586 354 284 93 19 chr5 8080796 8080958 -195004574 - MLT1I LTR MaLR -10 399 226 22 70 0 0 chr5 8082379 8082422 -195003110 + AT_rich Low_complexity Low_complexity 1 43 0 334 346 100 4 chr5 8083088 8083328 -195002204 + L2 LINE L2 2621 2883 -431 24 32 0 0 chr5 8083484 8083515 -195002017 + AT_rich Low_complexity Low_complexity 1 31 0 319 326 58 7 chr5 8083781 8083919 -195001613 + MIR SINE MIR 8 152 -110 349 297 99 56 chr5 8085773 8086005 -194999527 + MIR SINE MIR 19 260 -2 199 229 169 36 chr5 8086000 8086083 -194999449 - L2 LINE L2 -33 3280 3187 * 1881 129 161 13 chr5 8086937 8087310 -194998222 - MSTA LTR MaLR 0 428 1 2299 117 3 0 chr5 8087629 8087938 -194997594 + AluSg SINE Alu 1 310 0 509 146 0 0 chr5 8088010 8088092 -194997440 - Tigger1 DNA MER2_type 0 2418 2337 * 5564 156 26 3 chr5 8088090 8089033 -194996499 - Tigger1 DNA MER2_type -1393 1025 56 195 42 0 0 chr5 8089033 8089057 -194996475 + (TA)n Simple_repeat Simple_repeat 1 24 0 5564 156 26 3 chr5 8089057 8089115 -194996417 - Tigger1 DNA MER2_type -2362 56 1 309 261 268 0 chr5 8090253 8090395 -194995137 + MIR SINE MIR 72 251 -11 212 195 39 104 chr5 8090479 8090556 -194994976 + MIR3 SINE MIR 101 172 -36 1559 290 47 24 chr5 8091161 8092466 -194993066 - ERVL LTR ERVL -1916 3848 2416 1113 292 84 11 chr5 8092533 8092999 -194992533 - ERVL LTR ERVL -3462 2302 1803 2493 60 0 0 chr5 8093108 8093406 -194992126 + AluY SINE Alu 1 298 -13 808 224 24 0 chr5 8093461 8093626 -194991906 + FRAM SINE Alu 1 166 -10 1926 178 21 40 chr5 8094437 8094859 -194990673 + MLT2D LTR ERVL 1 414 0 656 238 0 0 chr5 8095253 8095375 -194990157 + FLAM_C SINE Alu 3 124 -19 727 204 151 70 chr5 8095480 8095837 -194989695 + MLT1B LTR MaLR 1 386 -4 7229 134 21 5 chr5 8095930 8097205 -194988327 - Tigger4(Zombi) DNA MER2_type -1 2730 1443 783 97 8 8 chr5 8097217 8097341 -194988191 + MER4A LTR ERV1 1 124 -540 311 111 0 19 chr5 8097341 8097395 -194988137 + (GAAA)n Simple_repeat Simple_repeat 1 53 0 1247 137 155 161 chr5 8097405 8097947 -194987585 + MER4A LTR ERV1 126 664 0 7517 153 16 8 chr5 8097947 8099268 -194986264 - Tigger4(Zombi) DNA MER2_type -1297 1434 103 1069 140 57 83 chr5 8099472 8099736 -194985796 + THE1C LTR MaLR 1 257 -118 272 357 43 47 chr5 8100745 8101022 -194984510 + L2 LINE L2 1742 2017 -1297 513 167 0 0 chr5 8101507 8101609 -194983923 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 609 336 119 30 chr5 8103529 8103559 -194981973 + L2 LINE L2 2721 2747 -566 1523 154 67 83 chr5 8103559 8103994 -194981538 + MSTB1 LTR MaLR 1 428 -4 609 336 119 30 chr5 8103994 8104485 -194981047 + L2 LINE L2 2747 3294 -19 349 210 40 30 chr5 8106368 8106468 -194979064 - MER94 DNA DNA -33 101 1 2870 94 18 16 chr5 8106924 8106972 -194978560 - L1PB2 LINE L1 -2 6149 6103 2326 124 34 8 chr5 8106972 8107327 -194978205 + THE1B LTR MaLR 1 364 0 2870 94 18 16 chr5 8107327 8107716 -194977816 - L1PB2 LINE L1 -48 6103 5711 22 0 0 0 chr5 8107784 8107806 -194977726 + AT_rich Low_complexity Low_complexity 1 22 0 2018 114 0 0 chr5 8108323 8108594 -194976938 + AluSc SINE Alu 35 305 -4 22 0 0 0 chr5 8108691 8108713 -194976819 + AT_rich Low_complexity Low_complexity 1 22 0 2848 7 0 0 chr5 8110040 8110347 -194975185 - AluYa5 SINE Alu -4 307 1 2100 121 0 0 chr5 8110465 8110776 -194974756 + AluSc SINE Alu 1 311 0 744 241 43 35 chr5 8110866 8111123 -194974409 + MER90 LTR ERV1 7 265 -310 678 158 201 11 chr5 8111137 8111321 -194974211 + MER90 LTR ERV1 382 600 -14 3393 227 48 43 chr5 8112400 8113533 -194971999 + MER52A LTR ERV1 56 1193 -562 338 183 0 0 chr5 8113540 8113600 -194971932 + MER52A LTR ERV1 1696 1755 0 * 792 203 154 24 chr5 8113600 8113845 -194971687 + MLT1B LTR MaLR 114 390 0 2183 111 7 3 chr5 8113914 8114211 -194971321 + AluSp SINE Alu 12 309 -4 452 283 34 34 chr5 8114313 8114546 -194970986 - L1ME1 LINE L1 -6 6160 5928 532 224 0 9 chr5 8114840 8114956 -194970576 + L1MDb LINE L1 43 157 -6252 1738 162 68 31 chr5 8114956 8115107 -194970425 + THE1B LTR MaLR 1 145 -219 2183 131 0 0 chr5 8115107 8115405 -194970127 + AluSq SINE Alu 1 298 -15 1738 162 68 31 chr5 8115405 8115604 -194969928 + THE1B LTR MaLR 145 364 0 4548 227 62 49 chr5 8115644 8117357 -194968175 - L1MDb LINE L1 -4672 1734 8 1594 209 42 27 chr5 8117411 8118118 -194967414 + L1MD1 LINE L1 4968 5848 -394 2483 60 0 0 chr5 8118118 8118419 -194967113 + AluY SINE Alu 1 301 -10 1594 209 42 27 chr5 8118419 8118815 -194966717 + L1MD1 LINE L1 5848 6236 -6 2779 256 99 37 chr5 8119145 8119516 -194966016 - L1MD3 LINE L1 -749 6192 5846 297 0 0 0 chr5 8119516 8119549 -194965983 + (TG)n Simple_repeat Simple_repeat 2 34 0 2779 256 99 37 chr5 8119549 8121667 -194963865 - L1MD3 LINE L1 -1095 5846 5156 2062 144 3 3 chr5 8121667 8121973 -194963559 - AluSc SINE Alu -3 306 1 2779 256 99 37 chr5 8121973 8122152 -194963380 - L1MD3 LINE L1 -1785 5156 4990 679 255 64 85 chr5 8122171 8122547 -194962985 - MSTD LTR MaLR -23 373 6 1289 293 57 18 chr5 8122554 8123446 -194962086 - L1MD3 LINE L1 -2029 4912 3986 401 231 56 42 chr5 8123508 8123651 -194961881 - L1MD3 LINE L1 -4451 2490 2346 336 48 0 0 chr5 8123706 8123748 -194961784 + (CA)n Simple_repeat Simple_repeat 2 43 0 1274 80 0 45 chr5 8123751 8123802 -194961730 - L1P5 LINE L1 -370 5781 5729 1908 134 7 20 chr5 8123802 8124100 -194961432 - AluSq SINE Alu -19 294 1 1274 80 0 45 chr5 8124100 8124247 -194961285 - L1P5 LINE L1 -422 5729 5592 738 257 58 56 chr5 8124237 8124650 -194960882 - L1MD3 LINE L1 -4888 1535 1122 * 506 310 77 75 chr5 8125249 8125688 -194959844 - L1MD3 LINE L1 -5604 818 379 363 191 0 0 chr5 8126250 8126313 -194959219 - MER4A LTR ERV1 -224 440 378 3281 217 62 72 chr5 8126313 8128370 -194957162 - HERVH LTR ERV1 -5666 2047 1 1241 173 121 72 chr5 8128370 8128799 -194956733 - LTR7 LTR ERV1 0 450 1 1905 229 69 9 chr5 8128958 8129491 -194956041 + MER34B LTR ERV1 1 565 0 269 136 0 0 chr5 8129714 8129758 -194955774 + L1MB1 LINE L1 6125 6168 0 1556 139 25 68 chr5 8129842 8130202 -194955330 - MER4A LTR ERV1 0 664 262 438 144 89 0 chr5 8130203 8130293 -194955239 - MER4A LTR ERV1 -566 98 1 237 281 21 42 chr5 8130474 8130570 -194954962 - L1MDb LINE L1 -6004 405 312 226 279 36 0 chr5 8130820 8130931 -194954601 + L1ME LINE L1 5677 5791 -330 2261 76 3 0 chr5 8131166 8131467 -194954065 + AluY SINE Alu 1 302 -9 380 213 8 0 chr5 8132911 8133033 -194952499 + (TA)n Simple_repeat Simple_repeat 2 124 0 2408 63 3 0 chr5 8133635 8133935 -194951597 + AluY SINE Alu 1 301 -10 22 56 0 0 chr5 8134434 8134470 -194951062 + AT_rich Low_complexity Low_complexity 1 36 0 12122 28 4 0 chr5 8134820 8137013 -194948519 + L1PA3 LINE L1 3883 6085 -70 889 177 7 131 chr5 8137137 8137420 -194948112 + MLT1A1 LTR MaLR 116 363 -2 287 284 53 110 chr5 8139039 8139321 -194946211 - L2 LINE L2 -19 3253 2988 198 326 33 33 chr5 8139681 8139773 -194945759 + L2 LINE L2 3162 3253 -19 27 29 0 0 chr5 8142267 8142301 -194943231 + AT_rich Low_complexity Low_complexity 1 34 0 6196 205 28 5 chr5 8143049 8144549 -194940983 + L1 LINE L1 3478 5011 -1135 460 215 56 0 chr5 8144550 8144657 -194940875 + MER68 LTR ERV1 450 562 0 488 302 19 6 chr5 8145030 8145189 -194940343 - MIR SINE MIR -42 220 60 2295 87 0 10 chr5 8146337 8146648 -194938884 + AluY SINE Alu 1 308 -3 324 343 112 12 chr5 8147122 8147364 -194938168 - L2 LINE L2 -1059 2255 1990 332 227 114 23 chr5 8147411 8147543 -194937989 - L2 LINE L2 -58 3255 3112 2044 121 0 39 chr5 8148310 8148616 -194936916 + AluY SINE Alu 3 296 -15 2589 133 30 0 chr5 8149241 8149640 -194935892 + LTR57 LTR ERVL 1 411 0 281 26 26 0 chr5 8150639 8150677 -194934855 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 446 215 37 0 chr5 8151417 8151524 -194934008 - L1MA4 LINE L1 -220 6080 5970 1930 167 3 3 chr5 8153392 8153697 -194931835 + AluSx SINE Alu 1 305 -7 4734 234 29 8 chr5 8153871 8155249 -194930283 - L1M4 LINE L1 -1109 5037 3631 552 173 29 7 chr5 8155609 8155748 -194929784 + CT-rich Low_complexity Low_complexity 3 144 0 2531 107 28 0 chr5 8158264 8158618 -194926914 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr5 8159645 8159679 -194925853 + AT_rich Low_complexity Low_complexity 1 34 0 274 256 0 0 chr5 8160041 8160123 -194925409 - L1ME LINE L1 -415 5755 5674 2096 137 23 0 chr5 8160784 8161126 -194924406 + L1PA14 LINE L1 5812 6161 0 281 231 128 26 chr5 8162651 8162768 -194922764 - LTR16A LTR ERVL -2 448 320 350 306 22 55 chr5 8163236 8163419 -194922113 + MER5B DNA MER1_type 2 178 0 392 304 155 19 chr5 8165581 8165788 -194919744 - MIR SINE MIR 0 262 28 233 294 0 78 chr5 8165811 8165913 -194919619 - L2 LINE L2 -24 3289 3196 939 234 20 16 chr5 8166778 8167022 -194918510 + L1PB4 LINE L1 5898 6142 -14 1490 196 54 4 chr5 8167034 8167431 -194918101 - L1ME LINE L1 -744 5589 5176 234 0 0 0 chr5 8167437 8167463 -194918069 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 407 136 0 0 chr5 8168224 8168290 -194917242 + Alu SINE Alu 235 300 -12 22 0 0 0 chr5 8168357 8168379 -194917153 + AT_rich Low_complexity Low_complexity 1 22 0 256 24 24 24 chr5 8169342 8169384 -194916148 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7715 17 2 0 chr5 8169384 8170699 -194914833 - L1PA3 LINE L1 -10 6145 4827 23 92 0 0 chr5 8170928 8170993 -194914539 + AT_rich Low_complexity Low_complexity 1 65 0 1863 162 72 17 chr5 8171753 8172098 -194913434 + THE1B LTR MaLR 1 364 0 1558 152 194 8 chr5 8172312 8172668 -194912864 - MSTA LTR MaLR 0 428 7 21 36 0 0 chr5 8173206 8173234 -194912298 + AT_rich Low_complexity Low_complexity 1 28 0 955 142 17 94 chr5 8173602 8173872 -194911660 - L1M1 LINE L1 -743 5403 5223 1093 256 0 9 chr5 8173930 8174251 -194911281 - L1MCa LINE L1 -3231 3195 2878 242 122 0 20 chr5 8174251 8174300 -194911232 + (TCC)n Simple_repeat Simple_repeat 3 50 0 836 261 80 60 chr5 8174302 8174931 -194910601 - L1MCa LINE L1 -3558 2868 2253 2329 94 3 0 chr5 8174931 8175229 -194910303 + AluSp SINE Alu 2 300 -13 836 261 80 60 chr5 8175229 8176021 -194909511 - L1MCa LINE L1 -4173 2253 1275 227 191 16 16 chr5 8176089 8176152 -194909380 - Charlie2a DNA MER1_type -691 2171 2109 27 29 0 0 chr5 8176190 8176224 -194909308 + AT_rich Low_complexity Low_complexity 1 34 0 999 260 32 63 chr5 8176237 8176790 -194908742 - Charlie2a DNA MER1_type -781 2081 1546 2277 47 22 0 chr5 8178877 8179228 -194906304 - AluY SINE Alu 0 311 5 1870 100 82 0 chr5 8179551 8179831 -194905701 - AluSp SINE Alu -10 303 1 443 127 0 0 chr5 8180020 8180091 -194905441 - MADE1 DNA Mariner -9 71 1 21 0 0 0 chr5 8180177 8180198 -194905334 + AT_rich Low_complexity Low_complexity 1 21 0 218 222 34 34 chr5 8180482 8180599 -194904933 + (TA)n Simple_repeat Simple_repeat 1 117 0 1281 147 77 18 chr5 8182250 8182522 -194903010 + MER46B DNA MER2_type 1 163 -73 2065 144 0 22 chr5 8182732 8183051 -194902481 - AluSx SINE Alu 0 312 1 2031 163 0 0 chr5 8183103 8183397 -194902135 - AluSx SINE Alu -18 294 1 506 218 34 58 chr5 8183773 8183979 -194901553 - L1MA10 LINE L1 0 6334 6134 4794 167 11 9 chr5 8184277 8185638 -194899894 + L1PA16 LINE L1 4784 6160 -6 268 342 9 0 chr5 8186033 8186147 -194899385 - L1MCa LINE L1 -6066 541 427 253 288 0 0 chr5 8186353 8186433 -194899099 - MER89-int LTR ERV1 -134 6667 6588 1699 216 17 11 chr5 8187120 8187476 -194898056 + MLT1A1 LTR MaLR 4 361 -4 835 328 30 7 chr5 8187481 8187914 -194897618 + L1MEc LINE L1 81 523 -5873 210 288 0 0 chr5 8189999 8190058 -194895474 + CT-rich Low_complexity Low_complexity 1 59 0 312 193 84 0 chr5 8190889 8190972 -194894560 - MLT1E3 LTR MaLR -9 615 526 637 186 87 50 chr5 8191289 8191450 -194894082 + MER5A DNA MER1_type 18 184 -5 359 243 29 71 chr5 8192015 8192225 -194893307 - L1MA10 LINE L1 0 6334 6134 257 208 14 0 chr5 8193322 8193394 -194892138 + (TA)n Simple_repeat Simple_repeat 1 73 0 25 31 0 0 chr5 8193738 8193770 -194891762 + AT_rich Low_complexity Low_complexity 1 32 0 200 299 75 0 chr5 8194444 8194511 -194891021 + MIR SINE MIR 110 181 -81 346 262 135 24 chr5 8195547 8195673 -194889859 - MER91C DNA MER1_type 0 140 1 300 269 35 28 chr5 8195793 8195938 -194889594 - LTR16C LTR ERVL -2 489 344 183 360 44 9 chr5 8201157 8201271 -194884261 - L2 LINE L2 -640 2674 2557 21 36 0 0 chr5 8202540 8202568 -194882964 + AT_rich Low_complexity Low_complexity 1 28 0 2509 51 0 3 chr5 8203133 8203426 -194882106 + AluY SINE Alu 1 292 -19 2547 159 4 50 chr5 8203832 8204296 -194881236 - MER65A LTR ERV1 0 445 3 256 318 65 18 chr5 8205844 8206014 -194879518 + LTR41 LTR ERVL 8 185 -588 1248 255 53 44 chr5 8206679 8207091 -194878441 + LTR40a LTR ERVL 104 519 0 943 238 0 15 chr5 8207766 8207968 -194877564 + L1PA13 LINE L1 2 200 -6587 427 288 53 82 chr5 8207952 8208271 -194877261 + L1PA13 LINE L1 417 726 -6061 * 5462 266 26 35 chr5 8208453 8211298 -194874234 + L1PA13 LINE L1 1323 4136 -2661 1692 171 60 41 chr5 8211315 8211683 -194873849 - THE1C LTR MaLR 0 375 1 6488 157 16 56 chr5 8211683 8212958 -194872574 - THE1C-int LTR MaLR 0 1580 357 1120 231 3 60 chr5 8213079 8213378 -194872154 + AluJb SINE Alu 1 282 -30 1946 255 47 55 chr5 8213395 8214290 -194871242 - L1M4 LINE L1 -2614 3532 2645 457 248 32 16 chr5 8214292 8214417 -194871115 - L1MCb LINE L1 -5349 696 570 258 289 33 25 chr5 8214504 8214625 -194870907 - L1MCb LINE L1 -5475 570 449 439 255 54 88 chr5 8216909 8217148 -194868384 - MLT1J LTR MaLR -53 458 228 269 253 13 13 chr5 8217290 8217365 -194868167 - MLT1L LTR MaLR -540 75 1 387 41 0 0 chr5 8219188 8219237 -194866295 + (TG)n Simple_repeat Simple_repeat 2 50 0 209 182 0 65 chr5 8219756 8219833 -194865699 + A-rich Low_complexity Low_complexity 3 74 0 330 302 90 54 chr5 8220130 8220352 -194865180 - L2 LINE L2 -9 3304 3075 1024 282 68 21 chr5 8220450 8220875 -194864657 - L2 LINE L2 -476 2838 2394 491 294 11 39 chr5 8221115 8221295 -194864237 + L2 LINE L2 2512 2686 -628 395 292 19 43 chr5 8222118 8222327 -194863205 - MLT1J1 LTR MaLR -9 437 234 210 143 0 0 chr5 8222886 8222921 -194862611 + (GGGAA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 8224257 8224279 -194861253 + AT_rich Low_complexity Low_complexity 1 22 0 380 258 147 26 chr5 8224376 8224566 -194860966 - L1MC4a LINE L1 -86 7722 7510 15472 169 45 62 chr5 8225044 8229873 -194855659 - L1 LINE L1 -2029 5536 773 5855 109 5 6 chr5 8229873 8230654 -194854878 + LTR17 LTR ERV1 1 780 0 15472 169 45 62 chr5 8230654 8230727 -194854805 - L1 LINE L1 -6792 773 700 5796 126 24 27 chr5 8230790 8231809 -194853723 - L1P3 LINE L1 -4734 1141 271 1548 105 9 0 chr5 8231985 8232204 -194853328 + L1PA14 LINE L1 5939 6159 -2 247 366 0 0 chr5 8232595 8232696 -194852836 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 8233769 8233955 -194851577 - MLT1J2 LTR MaLR -15 534 347 434 316 26 0 chr5 8234574 8234729 -194850803 - MLT1J2 LTR MaLR -187 263 105 582 277 15 42 chr5 8234742 8235002 -194850530 + L1ME3A LINE L1 5917 6169 -1 1163 159 8 41 chr5 8235020 8235189 -194850343 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 8235189 8235463 -194850069 + AluJb SINE Alu 1 292 -20 1163 159 8 41 chr5 8235463 8235578 -194849954 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 8236498 8236529 -194849003 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 8238040 8238403 -194847129 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 8238832 8238854 -194846678 + MLT1A2 LTR MaLR 1 21 -353 2665 136 30 28 chr5 8238854 8239280 -194846252 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 8239280 8239347 -194846185 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 8239347 8239688 -194845844 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 8239688 8239968 -194845564 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 8241191 8241438 -194844094 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 8241439 8241618 -194843914 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 8241627 8241736 -194843796 + MSTA LTR MaLR 320 428 0 2545 200 32 6 chr5 8241755 8242254 -194843278 - L1MB1 LINE L1 -119 6070 5559 299 188 41 18 chr5 8243004 8243174 -194842358 + (TG)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 8243210 8243396 -194842136 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 8243507 8243681 -194841851 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 8243700 8243936 -194841596 + (TG)n Simple_repeat Simple_repeat 1 242 0 601 170 7 85 chr5 8245165 8245235 -194840297 + MLT1D LTR MaLR 376 431 -74 1993 160 0 0 chr5 8245235 8245547 -194839985 - AluSx SINE Alu 0 312 1 601 170 7 85 chr5 8245547 8245617 -194839915 + MLT1D LTR MaLR 431 505 0 1858 135 14 14 chr5 8245859 8246156 -194839376 - L1P3 LINE L1 -5578 297 1 * 2476 271 52 11 chr5 8246150 8246818 -194838714 - L1M1 LINE L1 -6853 712 17 216 379 9 26 chr5 8246897 8247013 -194838519 + MER5A DNA MER1_type 67 180 -9 21 57 0 0 chr5 8247732 8247767 -194837765 + AT_rich Low_complexity Low_complexity 1 35 0 634 244 76 0 chr5 8248157 8248329 -194837203 + MER5A DNA MER1_type 2 186 -3 813 105 29 6 chr5 8249819 8249991 -194835541 + (TAGA)n Simple_repeat Simple_repeat 2 177 0 1216 233 11 32 chr5 8249991 8250339 -194835193 - MLT2C1 LTR ERVL -54 343 3 2342 103 0 10 chr5 8250548 8250859 -194834673 + AluSq SINE Alu 1 308 -5 313 278 62 0 chr5 8251373 8251470 -194834062 - HAL1 LINE L1 -857 1650 1548 692 285 92 15 chr5 8251532 8251998 -194833534 + MER20B DNA MER1_type 281 782 -1 247 274 62 84 chr5 8252032 8252211 -194833321 - HAL1 LINE L1 -2331 176 2 429 316 49 49 chr5 8252402 8252646 -194832886 + MIR SINE MIR 19 262 0 22 56 0 0 chr5 8253305 8253341 -194832191 + AT_rich Low_complexity Low_complexity 1 36 0 2406 181 45 22 chr5 8253997 8254599 -194830933 - L1MA8 LINE L1 -59 6232 5617 3123 169 53 46 chr5 8254600 8255579 -194829953 + L1MA8 LINE L1 4634 5607 -684 365 0 22 0 chr5 8256087 8256132 -194829400 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 2357 52 10 0 chr5 8256141 8256429 -194829103 - AluY SINE Alu -20 291 1 259 266 21 63 chr5 8257561 8257704 -194827828 - MER65B LTR ERV1 -394 137 1 1961 79 4 0 chr5 8258081 8258335 -194827197 + AluY SINE Alu 57 311 0 452 282 18 72 chr5 8258345 8258622 -194826910 + MLT1E1-int LTR MaLR 969 1230 -141 1188 227 109 91 chr5 8258736 8259362 -194826170 + MLT1E1 LTR MaLR 18 654 0 542 261 0 0 chr5 8261440 8261559 -194823973 - Tigger3(Golem) DNA MER2_type -2909 120 2 499 277 114 42 chr5 8262717 8263024 -194822508 + LTR16B LTR ERVL 1 329 -135 21 36 0 0 chr5 8263931 8263959 -194821573 + AT_rich Low_complexity Low_complexity 1 28 0 661 154 8 8 chr5 8265168 8265298 -194820234 + GA-rich Low_complexity Low_complexity 3 132 0 19769 58 1 3 chr5 8265359 8268712 -194816820 - L1PA6 LINE L1 -6 6148 2805 2794 114 18 5 chr5 8269913 8270351 -194815181 - L1PB2 LINE L1 -3 6148 5705 350 103 88 0 chr5 8270791 8270859 -194814673 - L1P5 LINE L1 -373 5778 5705 1728 102 33 126 chr5 8272096 8272430 -194813102 + AluSq SINE Alu 1 303 -10 527 259 74 54 chr5 8272433 8272730 -194812802 + LTR33A LTR ERVL 221 523 0 740 301 107 46 chr5 8272862 8273387 -194812145 - MLT1G1 LTR MaLR -36 559 3 1842 127 3 45 chr5 8273674 8274010 -194811522 - AluSx SINE Alu 0 326 3 472 269 15 0 chr5 8274574 8274708 -194810824 - MER119 DNA MER1_type 0 583 448 984 242 81 20 chr5 8274742 8275039 -194810493 - MER119 DNA MER1_type -268 315 1 687 188 227 0 chr5 8275047 8275223 -194810309 + MER20 DNA MER1_type 1 216 -3 1487 237 121 29 chr5 8275364 8275820 -194809712 + MLT2B1 LTR ERVL 13 510 -10 305 287 42 48 chr5 8276551 8276718 -194808814 - L2 LINE L2 -273 2999 2834 2136 111 0 10 chr5 8277594 8277891 -194807641 - AluSg SINE Alu -16 294 1 7856 12 0 0 chr5 8277912 8279136 -194806396 - L1PA2 LINE L1 0 6155 4934 3884 33 0 0 chr5 8279136 8279624 -194805908 + L1PA2 LINE L1 4440 4927 -1219 964 261 118 52 chr5 8280020 8280502 -194805030 + MER90 LTR ERV1 92 605 -9 261 57 0 0 chr5 8283088 8283123 -194802409 + (CA)n Simple_repeat Simple_repeat 1 35 0 310 348 65 0 chr5 8284986 8285124 -194800408 - MIR SINE MIR -29 233 87 184 405 22 0 chr5 8285267 8285356 -194800176 + MER5A DNA MER1_type 9 99 -90 431 104 0 0 chr5 8285487 8285554 -194799978 + L1P LINE L1 2913 2979 -3167 3578 64 2 0 chr5 8285559 8286014 -194799518 + L1PA7 LINE L1 5695 6150 -4 482 155 39 13 chr5 8287005 8287241 -194798291 + (CA)n Simple_repeat Simple_repeat 1 242 0 281 184 29 29 chr5 8287260 8287434 -194798098 + (CA)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 8287545 8287731 -194797801 + (CA)n Simple_repeat Simple_repeat 1 180 0 329 182 47 12 chr5 8287767 8287937 -194797595 + (CA)n Simple_repeat Simple_repeat 1 176 0 2309 200 32 6 chr5 8288687 8289186 -194796346 + L1MB1 LINE L1 5559 6070 -119 784 83 0 0 chr5 8289205 8289314 -194796218 - MSTA LTR MaLR 0 428 320 955 153 51 6 chr5 8289326 8289502 -194796030 - MSTA LTR MaLR -244 184 1 1322 170 0 8 chr5 8289503 8289750 -194795782 + L1MA10 LINE L1 6088 6332 -2 1463 181 57 48 chr5 8290973 8291253 -194794279 - MLT1A2 LTR MaLR 0 374 98 1347 196 94 24 chr5 8291253 8291594 -194793938 + MLT1A1 LTR MaLR 1 365 0 1463 181 57 48 chr5 8291594 8291661 -194793871 - MLT1A2 LTR MaLR -276 98 21 2462 136 30 30 chr5 8291661 8292088 -194793444 - MSTA LTR MaLR -1 427 1 1463 181 57 48 chr5 8292088 8292110 -194793422 - MLT1A2 LTR MaLR -353 21 1 1815 141 63 30 chr5 8292539 8292902 -194792630 + THE1C LTR MaLR 1 375 0 24 32 0 0 chr5 8294413 8294444 -194791088 + AT_rich Low_complexity Low_complexity 1 31 0 1016 167 8 41 chr5 8295364 8295479 -194790053 - L1ME LINE L1 -697 5469 5352 1360 193 77 11 chr5 8295479 8295753 -194789779 - AluJb SINE Alu -20 292 1 1016 167 8 41 chr5 8295753 8295922 -194789610 - L1ME LINE L1 -814 5352 5192 24 0 0 0 chr5 8295932 8295956 -194789576 + AT_rich Low_complexity Low_complexity 1 24 0 498 288 16 33 chr5 8295957 8296200 -194789332 - L1ME3A LINE L1 -15 6155 5917 358 313 27 0 chr5 8296213 8296360 -194789172 + MLT1J2 LTR MaLR 105 255 -195 365 320 26 0 chr5 8297019 8297172 -194788360 + MLT1H LTR MaLR 378 534 -15 240 333 0 43 chr5 8298246 8298363 -194787169 - L2 LINE L2 -5 3308 3197 2066 96 7 0 chr5 8298738 8299040 -194786492 - L1PA14 LINE L1 -2 6159 5856 2279 103 0 22 chr5 8299041 8299352 -194786180 - AluSq SINE Alu -9 304 1 21 0 0 0 chr5 8300642 8300663 -194784869 + AT_rich Low_complexity Low_complexity 1 21 0 673 305 181 25 chr5 8300713 8301304 -194784228 - L1M4 LINE L1 -1858 4288 3606 1885 138 164 11 chr5 8301353 8301724 -194783808 + MSTA LTR MaLR 1 428 0 24 0 0 0 chr5 8301833 8301857 -194783675 + AT_rich Low_complexity Low_complexity 1 24 0 328 333 30 0 chr5 8301876 8302008 -194783524 - L1M4 LINE L1 -2355 3791 3656 213 178 0 0 chr5 8302208 8302253 -194783279 + (TA)n Simple_repeat Simple_repeat 1 45 0 367 267 10 0 chr5 8302264 8302365 -194783167 - MLT2D LTR ERVL -42 478 377 842 205 16 11 chr5 8302389 8302579 -194782953 - MLT2D LTR ERVL -218 196 6 399 298 59 50 chr5 8302624 8302844 -194782688 + MIR3 SINE MIR 14 236 -26 2576 140 63 2 chr5 8302985 8303429 -194782103 + LOR1a LTR ERV1 19 489 -8 209 417 45 15 chr5 8305042 8305174 -194780358 + MIR3 SINE MIR 2 137 -71 1783 119 15 4 chr5 8307179 8307440 -194778092 - AluSx SINE Alu -10 302 39 335 385 40 6 chr5 8307472 8307646 -194777886 + MIR SINE MIR 12 191 -71 23 86 0 0 chr5 8307717 8307775 -194777757 + AT_rich Low_complexity Low_complexity 1 58 0 268 277 69 15 chr5 8308078 8308208 -194777324 - MER106B DNA MER1_type 0 1059 923 388 193 18 0 chr5 8308213 8308322 -194777210 + (TA)n Simple_repeat Simple_repeat 1 111 0 32 0 0 0 chr5 8309071 8309103 -194776429 + AT_rich Low_complexity Low_complexity 1 32 0 42 57 0 0 chr5 8310421 8310491 -194775041 + AT_rich Low_complexity Low_complexity 1 70 0 317 227 152 8 chr5 8311104 8311236 -194774296 + MER58C DNA MER1_type 54 204 -11 303 307 45 25 chr5 8311636 8311838 -194773694 + HAL1 LINE L1 27 232 -2275 512 214 71 0 chr5 8312098 8312238 -194773294 - L1MEc LINE L1 -4306 2090 1941 2315 209 31 45 chr5 8312339 8312960 -194772572 - MER90 LTR ERV1 0 614 3 539 192 33 0 chr5 8313080 8313200 -194772332 + MLT2E LTR ERVL 504 627 -1 518 319 65 4 chr5 8313232 8313461 -194772071 + HAL1 LINE L1 357 599 -1908 463 282 88 12 chr5 8313700 8314355 -194771177 - L1MEc LINE L1 -3922 2474 1702 708 250 96 33 chr5 8315491 8315877 -194769655 - MLT1C LTR MaLR -3 464 2 596 332 42 14 chr5 8315891 8316105 -194769427 - MIR SINE MIR -38 224 5 338 233 14 0 chr5 8316112 8316185 -194769347 + MIR SINE MIR 113 186 -76 203 407 68 0 chr5 8316352 8316470 -194769062 + L2 LINE L2 3147 3272 0 227 114 23 0 chr5 8316871 8316915 -194768617 + (TA)n Simple_repeat Simple_repeat 2 46 0 211 315 62 23 chr5 8316986 8317116 -194768416 + MIR SINE MIR 57 191 -71 188 81 48 65 chr5 8317168 8317230 -194768302 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 1091 197 140 9 chr5 8318520 8318835 -194766697 - MLT1A1 LTR MaLR 0 365 10 2336 104 0 0 chr5 8319190 8319488 -194766044 - AluSg SINE Alu -10 300 3 225 270 150 10 chr5 8320017 8320117 -194765415 + MER5A DNA MER1_type 3 116 -73 4152 151 17 6 chr5 8321324 8322027 -194763505 - MER50 LTR ERV1 -23 711 1 23 33 0 0 chr5 8323053 8323083 -194762449 + AT_rich Low_complexity Low_complexity 1 30 0 656 250 83 10 chr5 8323524 8323728 -194761804 - MER20 DNA MER1_type 0 219 1 378 281 79 31 chr5 8323746 8323974 -194761558 - L1M4 LINE L1 -1380 4766 4528 25 65 0 0 chr5 8324182 8324228 -194761304 + AT_rich Low_complexity Low_complexity 1 46 0 699 244 114 0 chr5 8324446 8324647 -194760885 - MER58A DNA MER1_type 0 224 1 30 0 0 0 chr5 8324958 8324988 -194760544 + AT_rich Low_complexity Low_complexity 1 30 0 5319 76 4 3 chr5 8324988 8325674 -194759858 - L1PA7 LINE L1 -5 6149 5460 195 69 0 0 chr5 8325674 8325703 -194759829 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5319 76 4 3 chr5 8325703 8325727 -194759805 - L1PA7 LINE L1 -694 5460 5438 624 110 0 0 chr5 8325758 8325849 -194759683 - L1P3 LINE L1 -678 5476 5386 947 114 0 0 chr5 8325869 8325992 -194759540 - AluSg SINE Alu -187 123 1 9313 104 20 7 chr5 8325992 8326931 -194758601 - L1P3 LINE L1 -747 5399 4433 290 45 23 0 chr5 8326931 8326975 -194758557 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 9313 104 20 7 chr5 8326975 8327519 -194758013 - L1P3 LINE L1 -1713 4433 3897 1523 210 0 52 chr5 8327790 8328099 -194757433 + AluJo SINE Alu 3 295 -17 1249 240 72 33 chr5 8328497 8328556 -194756976 + L1M4 LINE L1 4732 4787 -1359 2057 154 0 6 chr5 8328556 8328868 -194756664 + AluSx SINE Alu 1 310 -2 1249 240 72 33 chr5 8328868 8329449 -194756083 + L1M4 LINE L1 4787 5397 -749 395 156 0 0 chr5 8329458 8329522 -194756010 + L1PA13 LINE L1 1 64 -6723 4786 244 100 18 chr5 8329529 8331533 -194753999 + L1PA13 LINE L1 617 2794 -4003 240 59 0 0 chr5 8331588 8331622 -194753910 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 35604 36 26 1 chr5 8331622 8337116 -194748416 - L1PA3 LINE L1 -13 6142 1 2423 51 0 10 chr5 8337951 8338245 -194747287 - AluY SINE Alu -8 303 13 234 281 11 0 chr5 8339723 8339812 -194745720 - L1P2 LINE L1 -355 5799 5710 905 343 43 16 chr5 8340057 8340606 -194744926 - Zaphod DNA AcHobo -3420 611 48 428 217 11 0 chr5 8340606 8340698 -194744834 - MER58 DNA MER1_type -3 2417 2325 703 177 65 16 chr5 8340701 8340887 -194744645 - MER58 DNA MER1_type -2224 196 2 721 219 92 15 chr5 8341105 8341301 -194744231 - L1MC2 LINE L1 -25 6319 6109 1274 79 23 0 chr5 8341360 8341537 -194743995 - THE1C LTR MaLR -194 181 1 1398 171 14 27 chr5 8341568 8341860 -194743672 - MLT2C2 LTR ERVL -175 289 2 380 288 50 31 chr5 8342198 8342358 -194743174 + MIR SINE MIR 30 192 -70 1973 41 0 4 chr5 8342711 8343013 -194742519 - L1PA4 LINE L1 0 6155 5895 3130 164 25 3 chr5 8344959 8345551 -194739981 - L1MA6 LINE L1 0 6300 5696 1829 144 33 0 chr5 8346032 8346328 -194739204 + AluSc SINE Alu 1 305 0 545 273 51 16 chr5 8346847 8347100 -194738432 - L1MC5 LINE L1 -722 7239 6978 362 268 36 0 chr5 8347141 8347253 -194738279 - L1ME1 LINE L1 -12 6154 6039 318 295 129 14 chr5 8347253 8347320 -194738212 - L1ME1 LINE L1 -831 5411 5353 1983 89 19 4 chr5 8347320 8347591 -194737941 - AluSq SINE Alu 0 313 39 318 295 129 14 chr5 8347591 8347662 -194737870 - L1ME1 LINE L1 -889 5353 5257 21 0 0 0 chr5 8347899 8347920 -194737612 + AT_rich Low_complexity Low_complexity 1 21 0 726 216 13 65 chr5 8347949 8348082 -194737450 - L1MB8 LINE L1 -9 6169 6051 1248 206 68 84 chr5 8348082 8348593 -194736939 - MLT1D LTR MaLR -2 503 1 726 216 13 65 chr5 8348593 8348690 -194736842 - L1MB8 LINE L1 -127 6051 5951 21 0 0 0 chr5 8349106 8349127 -194736405 + AT_rich Low_complexity Low_complexity 1 21 0 2096 160 22 75 chr5 8349601 8350008 -194735524 - MLT1C LTR MaLR 0 467 89 2224 99 6 13 chr5 8350008 8350322 -194735210 + AluSp SINE Alu 1 312 -1 2096 160 22 75 chr5 8350322 8350407 -194735125 - MLT1C LTR MaLR -378 89 1 691 199 42 30 chr5 8352503 8352669 -194732863 + MER50 LTR ERV1 1 168 -566 * 3257 181 26 25 chr5 8352663 8353140 -194732392 + MER50 LTR ERV1 86 567 -167 2156 108 0 0 chr5 8353140 8353438 -194732094 - AluSc SINE Alu 0 298 1 3257 181 26 25 chr5 8353438 8353607 -194731925 + MER50 LTR ERV1 567 734 0 332 318 86 18 chr5 8354787 8355067 -194730465 + L1M4 LINE L1 4243 4541 -1605 1748 191 7 0 chr5 8355326 8355630 -194729902 + AluJb SINE Alu 1 306 -6 524 28 0 28 chr5 8355633 8355704 -194729828 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 340 347 48 42 chr5 8355740 8356051 -194729481 + L1M4 LINE L1 4799 5111 -1035 1742 138 31 57 chr5 8356862 8357247 -194728285 + THE1C LTR MaLR 1 375 0 2467 55 7 0 chr5 8358736 8359044 -194726488 - AluY SINE Alu -1 310 1 2310 189 83 12 chr5 8360384 8360962 -194724570 - L1MC2 LINE L1 0 7747 6137 252 250 11 57 chr5 8360966 8361054 -194724478 - MLT1F1 LTR MaLR -459 108 25 470 196 130 0 chr5 8361084 8361222 -194724310 - L1MC3 LINE L1 -719 7066 6911 224 211 34 41 chr5 8362683 8362830 -194722702 + (TATAA)n Simple_repeat Simple_repeat 3 148 0 23 0 0 0 chr5 8362870 8362893 -194722639 + AT_rich Low_complexity Low_complexity 1 23 0 1249 253 180 17 chr5 8363394 8363860 -194721672 + MLT1E LTR MaLR 1 542 -51 202 136 17 34 chr5 8363878 8363937 -194721595 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 501 89 40 0 chr5 8363978 8364079 -194721453 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 1193 232 26 53 chr5 8364100 8364440 -194721092 - MLT2C1 LTR ERVL -65 332 2 201 259 17 0 chr5 8364967 8365025 -194720507 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 27 29 0 0 chr5 8366157 8366191 -194719341 + AT_rich Low_complexity Low_complexity 1 34 0 7963 220 21 19 chr5 8367292 8369414 -194716118 + L1 LINE L1 3014 5139 -1007 2937 95 24 7 chr5 8369407 8369922 -194715610 + L1P5 LINE L1 5175 5700 -451 * 424 95 24 0 chr5 8369924 8370008 -194715524 + (TA)n Simple_repeat Simple_repeat 1 86 0 1444 105 81 0 chr5 8370242 8370490 -194715042 - L1MA1 LINE L1 0 6302 6035 4321 119 17 22 chr5 8370522 8371006 -194714526 - L1MA2 LINE L1 0 6304 5824 2108 114 7 13 chr5 8371006 8371314 -194714218 - AluSq SINE Alu -7 306 1 4321 119 17 22 chr5 8371314 8371544 -194713988 - L1MA2 LINE L1 -480 5824 5594 2049 124 7 0 chr5 8373243 8373533 -194711999 - AluSx SINE Alu -20 292 1 203 337 63 11 chr5 8374151 8374246 -194711286 - MIR SINE MIR 0 262 163 1793 265 52 42 chr5 8374545 8375242 -194710290 + L1M3e LINE L1 466 1169 -6320 1657 288 53 21 chr5 8375313 8375602 -194709930 + L1M3e LINE L1 2008 2286 -5279 225 65 0 0 chr5 8375602 8375633 -194709899 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1657 288 53 21 chr5 8375633 8376170 -194709362 + L1M3e LINE L1 2286 2861 -4704 1766 179 18 25 chr5 8376205 8376601 -194708931 - L1 LINE L1 -2146 4000 3608 225 237 75 75 chr5 8377780 8377873 -194707659 + MIR SINE MIR 96 188 -74 641 221 7 0 chr5 8378070 8378206 -194707326 - FRAM SINE Alu -2 174 38 544 204 91 11 chr5 8378225 8378411 -194707121 + L1M4 LINE L1 4404 4604 -1542 398 262 54 50 chr5 8378422 8378643 -194706889 + L1MA9 LINE L1 6017 6238 -74 528 131 15 41 chr5 8378696 8379046 -194706486 + (TA)n Simple_repeat Simple_repeat 1 340 0 697 231 36 32 chr5 8379138 8379359 -194706173 + L1M4 LINE L1 4841 5062 -1084 426 308 0 8 chr5 8379376 8379496 -194706036 - L2 LINE L2 -1467 1847 1729 189 216 34 0 chr5 8379509 8379597 -194705935 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 211 321 95 42 chr5 8379655 8379823 -194705709 + MIR SINE MIR 73 249 -13 21 57 0 0 chr5 8380568 8380603 -194704929 + AT_rich Low_complexity Low_complexity 1 35 0 1865 163 137 11 chr5 8381832 8382212 -194703320 - MSTA LTR MaLR 0 428 1 264 278 60 20 chr5 8384135 8384286 -194701246 + Charlie7 DNA MER1_type 2434 2590 -22 436 273 10 11 chr5 8386308 8386483 -194699049 + L1M4 LINE L1 3764 3937 -2209 189 107 0 0 chr5 8386531 8386559 -194698973 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 415 324 130 12 chr5 8386581 8386927 -194698605 + L1M4 LINE L1 4139 4525 -1621 1215 194 22 86 chr5 8387519 8387843 -194697689 + MLT1B LTR MaLR 88 390 0 207 333 13 13 chr5 8387905 8387983 -194697549 - L2 LINE L2 -6 3266 3189 23 33 0 0 chr5 8388823 8388853 -194696679 + AT_rich Low_complexity Low_complexity 1 30 0 1964 130 161 34 chr5 8389076 8389403 -194696129 + MSTA LTR MaLR 3 386 -42 2150 106 21 58 chr5 8389403 8389779 -194695753 - THE1B LTR MaLR 0 364 3 1964 130 161 34 chr5 8389779 8389829 -194695703 + MSTA LTR MaLR 386 428 0 24 53 0 0 chr5 8389882 8389920 -194695612 + AT_rich Low_complexity Low_complexity 1 38 0 345 329 57 33 chr5 8390565 8390865 -194694667 + L1M4 LINE L1 2893 3224 -2922 433 260 86 88 chr5 8390941 8391233 -194694299 + L1M4 LINE L1 4266 4558 -1588 798 21 0 0 chr5 8391233 8391326 -194694206 + L1PA5 LINE L1 6056 6148 -6 433 260 86 88 chr5 8391326 8391417 -194694115 + L1M4 LINE L1 4558 4648 -1498 1497 203 6 19 chr5 8391505 8391820 -194693712 + AluJo SINE Alu 1 311 -1 2272 117 3 0 chr5 8391915 8392223 -194693309 + AluSg SINE Alu 1 309 -1 599 253 78 60 chr5 8393232 8393814 -194691718 + L1M3a LINE L1 1011 1585 -4811 3815 115 21 2 chr5 8393814 8394388 -194691144 + L1PA15 LINE L1 5578 6162 -3 599 253 78 60 chr5 8394388 8394494 -194691038 + L1M3a LINE L1 1585 1688 -4708 822 55 9 0 chr5 8394506 8394615 -194690917 + L1PA4 LINE L1 6043 6152 -3 999 213 42 42 chr5 8395241 8395480 -194690052 - MER8 DNA MER2_type 0 239 1 354 216 14 0 chr5 8395500 8395574 -194689958 - L1ME2 LINE L1 -15 6149 6075 21 36 0 0 chr5 8395944 8395972 -194689560 + AT_rich Low_complexity Low_complexity 1 28 0 346 223 11 43 chr5 8396398 8396492 -194689040 + MER8 DNA MER2_type 96 186 -53 2056 125 0 10 chr5 8396880 8397177 -194688355 + AluSg SINE Alu 1 294 -16 675 35 0 0 chr5 8397341 8397427 -194688105 - L1PA4 LINE L1 -3 6152 6067 23 0 0 0 chr5 8397454 8397477 -194688055 + AT_rich Low_complexity Low_complexity 1 23 0 2371 89 3 0 chr5 8400319 8400623 -194684909 + AluSp SINE Alu 1 305 -8 2476 18 0 0 chr5 8400756 8401029 -194684503 + AluYb8 SINE Alu 36 308 -10 977 155 0 7 chr5 8401936 8402091 -194683441 + THE1-int LTR MaLR 922 1075 -505 2707 189 33 2 chr5 8402192 8402693 -194682839 + MSTA-int LTR MaLR 1124 1643 -8 2457 151 48 22 chr5 8402701 8403118 -194682414 + MSTA LTR MaLR 1 428 0 211 273 269 33 chr5 8403732 8404003 -194681529 + L2 LINE L2 1765 2099 -1215 275 324 182 42 chr5 8404474 8405161 -194680371 + L2 LINE L2 2472 3253 -19 42896 37 24 4 chr5 8405913 8411936 -194673596 + L1PA3 LINE L1 13 6155 0 5051 167 16 6 chr5 8412372 8413228 -194672304 + MER49 LTR ERV1 1 865 -58 2385 86 0 16 chr5 8413271 8413585 -194671947 - AluY SINE Alu -2 309 1 254 257 16 44 chr5 8416195 8416378 -194669154 + (CAA)n Simple_repeat Simple_repeat 3 180 0 223 261 18 42 chr5 8416596 8416761 -194668771 + (CAA)n Simple_repeat Simple_repeat 3 163 0 22 88 0 0 chr5 8417375 8417432 -194668100 + AT_rich Low_complexity Low_complexity 1 57 0 382 331 78 9 chr5 8417476 8417807 -194667725 - L1ME3 LINE L1 -337 5825 5455 196 109 22 22 chr5 8417809 8417855 -194667677 + (TA)n Simple_repeat Simple_repeat 2 47 0 250 310 62 9 chr5 8418404 8418517 -194667015 + MIR SINE MIR 143 261 -1 3339 128 18 22 chr5 8418828 8419383 -194666149 + L1MA6 LINE L1 5742 6294 -6 22 0 0 0 chr5 8419391 8419413 -194666119 + AT_rich Low_complexity Low_complexity 1 22 0 282 226 0 48 chr5 8419569 8419653 -194665879 - L1M4 LINE L1 -3024 3122 3043 434 221 69 8 chr5 8419654 8419785 -194665747 - L1M4 LINE L1 -3053 3093 2955 744 194 106 17 chr5 8419795 8420032 -194665500 - MER58 DNA MER1_type -2 2418 2161 397 217 8 70 chr5 8420206 8420335 -194665197 - L2 LINE L2 0 3313 3193 3097 216 49 10 chr5 8420384 8421115 -194664417 - L1 LINE L1 -1193 4953 4194 29 60 0 0 chr5 8421328 8421378 -194664154 + AT_rich Low_complexity Low_complexity 1 50 0 2081 110 3 7 chr5 8421961 8422251 -194663281 + AluSc SINE Alu 3 291 -18 22 56 0 0 chr5 8422528 8422564 -194662968 + AT_rich Low_complexity Low_complexity 1 36 0 376 160 12 8 chr5 8422606 8422684 -194662848 + THE1C LTR MaLR 1 79 -276 225 191 0 0 chr5 8422690 8422737 -194662795 - L1P LINE L1 -1774 4372 4326 1779 162 18 30 chr5 8422739 8423073 -194662459 + THE1C LTR MaLR 46 375 0 207 271 0 0 chr5 8423676 8423724 -194661808 + CT-rich Low_complexity Low_complexity 4 51 0 1718 57 13 44 chr5 8424558 8424787 -194660745 - AluY SINE Alu -11 300 79 731 256 58 18 chr5 8424852 8425075 -194660457 + MIR SINE MIR 31 262 0 1310 174 42 51 chr5 8425132 8425280 -194660252 + MER33 DNA MER1_type 9 157 -2428 1705 56 0 0 chr5 8425280 8425507 -194660025 - AluY SINE Alu 0 312 86 1310 174 42 51 chr5 8425507 8425668 -194659864 + MER33 DNA MER1_type 157 316 -8 203 411 11 39 chr5 8426578 8426758 -194658774 - L3 LINE CR1 -34 1543 1369 4713 297 96 27 chr5 8427153 8428993 -194656539 + L2 LINE L2 420 2461 -853 279 0 0 0 chr5 8428993 8429024 -194656508 + (CA)n Simple_repeat Simple_repeat 2 32 0 4713 297 96 27 chr5 8429024 8429565 -194655967 + L2 LINE L2 2461 2964 -350 206 129 61 38 chr5 8429718 8429850 -194655682 + (TA)n Simple_repeat Simple_repeat 1 135 0 364 275 53 23 chr5 8429906 8430037 -194655495 + L2 LINE L2 3175 3309 -4 235 335 163 10 chr5 8430051 8430260 -194655272 - L3 LINE CR1 -96 1481 1241 409 254 46 56 chr5 8430932 8431129 -194654403 + MLT1F-int LTR MaLR 1163 1357 -14 993 284 104 6 chr5 8431156 8431491 -194654041 + MLT1F LTR MaLR 1 368 -174 202 286 250 27 chr5 8431600 8431712 -194653820 - L2 LINE L2 -10 3262 3126 224 272 66 73 chr5 8431977 8432113 -194653419 - L2 LINE L2 -337 2976 2842 2742 118 3 6 chr5 8432305 8432670 -194652862 + THE1B LTR MaLR 1 364 0 345 288 96 0 chr5 8434083 8434208 -194651324 - MLT1F LTR MaLR -403 139 3 768 0 0 0 chr5 8438500 8438587 -194646945 - L1HS LINE L1 -2 6153 6067 2374 158 27 54 chr5 8440562 8440863 -194644669 - MLT1C LTR MaLR 0 467 182 1565 189 10 30 chr5 8440863 8441165 -194644367 - AluJo SINE Alu -16 296 1 2374 158 27 54 chr5 8441165 8441343 -194644189 - MLT1C LTR MaLR -285 182 1 23 33 0 0 chr5 8443063 8443093 -194642439 + AT_rich Low_complexity Low_complexity 1 30 0 4185 134 46 65 chr5 8443500 8444300 -194641232 + LTR1 LTR ERV1 1 785 0 425 329 22 36 chr5 8444475 8444700 -194640832 + MIR SINE MIR 29 250 -12 1522 148 19 11 chr5 8444904 8445174 -194640358 + L1MA8 LINE L1 6013 6284 -7 2548 84 0 0 chr5 8445228 8445539 -194639993 - AluSx SINE Alu -1 311 1 2455 170 34 5 chr5 8446190 8446637 -194638895 + L1MA4 LINE L1 5426 5885 -415 * 30560 115 7 22 chr5 8446635 8452792 -194632740 + L1PA7 LINE L1 316 6469 0 234 242 81 0 chr5 8453086 8453148 -194632384 + MIR SINE MIR 90 156 -106 1470 183 17 56 chr5 8453225 8453581 -194631951 + MLT1B LTR MaLR 1 342 -48 1914 105 14 31 chr5 8453581 8454081 -194631451 - MER51B LTR ERV1 0 377 1 353 68 0 0 chr5 8454081 8454125 -194631407 + MLT1B LTR MaLR 339 382 -8 21 0 0 0 chr5 8454675 8454696 -194630836 + AT_rich Low_complexity Low_complexity 1 21 0 206 250 95 24 chr5 8455790 8455874 -194629658 - L3 LINE CR1 -881 696 607 362 300 137 23 chr5 8456125 8456432 -194629100 - LTR16A LTR ERVL -5 445 104 28 29 0 0 chr5 8456969 8457004 -194628528 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 8457150 8457193 -194628339 + AT_rich Low_complexity Low_complexity 1 43 0 201 315 12 30 chr5 8457889 8458024 -194627508 - MIR3 SINE MIR -53 155 23 2820 164 25 2 chr5 8460253 8460770 -194624762 - Tigger1 DNA MER2_type 0 2418 1890 913 195 53 73 chr5 8460794 8461096 -194624436 - PABL_B LTR ERV1 -23 644 349 306 327 23 55 chr5 8461102 8461319 -194624213 - PABL_B LTR ERV1 -457 210 1 5476 133 7 14 chr5 8461319 8462240 -194623292 - Tigger1 DNA MER2_type -534 1884 971 2479 84 0 0 chr5 8462484 8462794 -194622738 - AluY SINE Alu -1 310 1 4000 91 10 15 chr5 8462798 8463382 -194622150 - L1PA10 LINE L1 0 6168 5588 1751 136 58 14 chr5 8463382 8463918 -194621614 + L1PA10 LINE L1 4996 5558 -610 1078 237 159 0 chr5 8464097 8464469 -194621063 - MER74C LTR ERVL -27 433 3 192 77 0 0 chr5 8464469 8464495 -194621037 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 285 223 0 0 chr5 8465289 8465383 -194620149 + (TA)n Simple_repeat Simple_repeat 2 95 0 227 267 40 79 chr5 8465400 8465501 -194620031 + MIR3 SINE MIR 77 173 -35 526 223 32 13 chr5 8467035 8467192 -194618340 - L1MA10 LINE L1 -1 6333 6174 1395 204 106 31 chr5 8467206 8467594 -194617938 - L1MA9 LINE L1 -2 6310 5894 23 33 0 0 chr5 8467679 8467709 -194617823 + AT_rich Low_complexity Low_complexity 1 30 0 277 250 0 0 chr5 8469018 8469078 -194616454 + MER81 DNA DNA 29 88 -26 230 219 0 0 chr5 8470871 8470912 -194614620 + (TG)n Simple_repeat Simple_repeat 2 42 0 1229 256 20 6 chr5 8471587 8471931 -194613601 - MER89 LTR ERV1 -14 545 197 457 161 23 0 chr5 8471904 8471991 -194613541 - MER89 LTR ERV1 -470 89 1 * 2285 98 0 0 chr5 8473128 8473424 -194612108 + AluSq SINE Alu 1 296 -17 370 226 11 11 chr5 8476713 8476806 -194608726 - LTR16B LTR ERVL 0 464 372 291 314 188 19 chr5 8476815 8477124 -194608408 - L2 LINE L2 -1091 2223 1863 277 342 124 29 chr5 8477136 8477411 -194608121 - L2 LINE L2 -2782 532 232 43 20 0 0 chr5 8479094 8479144 -194606388 + AT_rich Low_complexity Low_complexity 1 50 0 1497 142 22 4 chr5 8479145 8479413 -194606119 - L1MA5A LINE L1 -4 6293 6021 487 268 18 0 chr5 8479561 8479725 -194605807 + L1MCa LINE L1 2064 2230 -4196 23 0 0 0 chr5 8479937 8479960 -194605572 + AT_rich Low_complexity Low_complexity 1 23 0 338 342 94 58 chr5 8481460 8481595 -194603937 - L2 LINE L2 0 3272 3143 2087 189 17 7 chr5 8481595 8482014 -194603518 + L1MA5 LINE L1 5871 6293 -7 338 342 94 58 chr5 8482014 8482241 -194603291 - L2 LINE L2 -129 3143 2897 369 122 0 10 chr5 8482412 8482496 -194603036 + L1PB4 LINE L1 5703 5784 -370 359 156 28 45 chr5 8482509 8482688 -194602844 + (TA)n Simple_repeat Simple_repeat 1 176 0 735 147 31 0 chr5 8482695 8482824 -194602708 + L1PB4 LINE L1 5776 5908 -248 4747 181 34 36 chr5 8482850 8484445 -194601087 - L1P5 LINE L1 -537 5617 4007 600 205 19 0 chr5 8484431 8484587 -194600945 + L1P5 LINE L1 3844 4002 -2144 * 600 290 22 11 chr5 8485828 8486011 -194599521 + MER5A DNA MER1_type 5 189 0 434 36 0 0 chr5 8486158 8486213 -194599319 - L1P LINE L1 -742 5413 5359 6195 29 1 0 chr5 8486213 8486937 -194598595 + L1PA3 LINE L1 5426 6152 -3 2466 72 0 0 chr5 8487310 8487602 -194597930 + AluY SINE Alu 1 292 -19 496 358 59 11 chr5 8487670 8487941 -194597591 - L2 LINE L2 -619 2695 2412 1705 186 3 43 chr5 8488473 8488528 -194597004 + MLT1A1 LTR MaLR 31 87 -278 1755 161 13 26 chr5 8488528 8488838 -194596694 + AluSx SINE Alu 1 306 -6 1705 186 3 43 chr5 8488838 8489131 -194596401 + MLT1A1 LTR MaLR 87 365 0 1415 190 196 0 chr5 8491069 8491427 -194594105 + MSTA LTR MaLR 1 428 0 215 351 60 8 chr5 8491510 8491644 -194593888 - MIR SINE MIR -3 259 119 399 41 0 0 chr5 8491888 8491937 -194593595 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1880 142 17 3 chr5 8492083 8492372 -194593160 - AluSx SINE Alu -19 293 1 416 136 15 0 chr5 8492415 8492481 -194593051 + AluS SINE Alu 1 67 -246 21 36 0 0 chr5 8493132 8493160 -194592372 + AT_rich Low_complexity Low_complexity 1 28 0 242 246 35 18 chr5 8495655 8495769 -194589763 + (TA)n Simple_repeat Simple_repeat 2 117 0 243 79 0 0 chr5 8497929 8497967 -194587565 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 795 80 40 23 chr5 8497973 8498148 -194587384 + CT-rich Low_complexity Low_complexity 1 178 0 593 201 12 12 chr5 8498159 8498328 -194587204 + CT-rich Low_complexity Low_complexity 1 169 0 835 209 25 6 chr5 8498328 8498491 -194587041 - FRAM SINE Alu 0 166 1 21 0 0 0 chr5 8498898 8498919 -194586613 + AT_rich Low_complexity Low_complexity 1 21 0 216 350 49 7 chr5 8499896 8500039 -194585493 + L3 LINE CR1 1220 1368 -209 1934 114 21 25 chr5 8500067 8500347 -194585185 - AluSx SINE Alu -9 303 25 779 206 119 0 chr5 8500465 8500659 -194584873 - MER58A DNA MER1_type -1 223 7 328 344 129 46 chr5 8500798 8501208 -194584324 + L3 LINE CR1 1010 1453 -124 186 103 0 0 chr5 8501334 8501363 -194584169 + (T)n Simple_repeat Simple_repeat 1 29 0 4292 88 7 2 chr5 8501372 8501982 -194583550 - THE1B-int LTR MaLR -967 613 1 2091 133 44 33 chr5 8501982 8502342 -194583190 - THE1B LTR MaLR 0 364 1 774 156 143 111 chr5 8502359 8502603 -194582929 + MLT1B LTR MaLR 139 390 0 6914 68 13 0 chr5 8502807 8504038 -194581494 - L1PA8 LINE L1 -4 6168 4930 3271 28 0 0 chr5 8504398 8504795 -194580737 + L1PA4 LINE L1 5463 5859 -296 803 186 56 0 chr5 8504795 8504956 -194580576 + MLT1A1 LTR MaLR 196 365 0 4033 200 13 17 chr5 8505629 8506528 -194579004 + L1MCa LINE L1 302 1197 -5229 2258 233 2 2 chr5 8506556 8507019 -194578513 + L1PA13 LINE L1 1 463 -6324 5422 223 33 13 chr5 8507021 8508523 -194577009 + L1PA13 LINE L1 2532 4063 -2734 2941 168 11 13 chr5 8508540 8509078 -194576454 + L1PA15 LINE L1 5616 6154 -11 180 0 0 0 chr5 8509078 8509098 -194576434 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1098 194 92 9 chr5 8509112 8509437 -194576095 + L1MCa LINE L1 1210 1561 -4865 1923 159 25 27 chr5 8509438 8509803 -194575729 - THE1B LTR MaLR 0 364 1 2441 83 0 11 chr5 8509803 8510152 -194575380 - THE1B-int LTR MaLR 0 1580 1236 3094 87 2 68 chr5 8510164 8510668 -194574864 + MER9 LTR ERVK 41 511 0 2736 94 10 5 chr5 8510668 8511070 -194574462 + HERVK9 LTR ERVK 1 404 -5512 608 122 0 0 chr5 8511086 8511168 -194574364 - AluS SINE Alu -231 82 1 687 113 0 17 chr5 8511807 8511922 -194573610 - MER85 DNA T2_type 0 139 27 201 194 48 29 chr5 8512607 8512710 -194572822 + (TATAA)n Simple_repeat Simple_repeat 4 108 0 216 313 36 24 chr5 8513649 8513732 -194571800 - L2 LINE L2 -554 2760 2677 23 0 0 0 chr5 8514307 8514330 -194571202 + AT_rich Low_complexity Low_complexity 1 23 0 342 279 29 29 chr5 8514832 8514936 -194570596 - MER5B DNA MER1_type -63 115 12 4451 223 99 81 chr5 8515024 8517087 -194568445 + L1MDa LINE L1 1 2100 -4440 4386 236 54 30 chr5 8517055 8517932 -194567600 + L1MDa LINE L1 2385 3239 -3301 * 1704 179 0 48 chr5 8517932 8518108 -194567424 - AluJo SINE Alu -14 298 142 2167 107 19 10 chr5 8518108 8518417 -194567115 - AluSp SINE Alu -1 312 1 1704 179 0 48 chr5 8518417 8518553 -194566979 - AluJo SINE Alu -170 142 1 4386 236 54 30 chr5 8518553 8519493 -194566039 + L1MDa LINE L1 3239 4244 -2296 588 330 36 28 chr5 8519725 8520083 -194565449 + MLT1I LTR MaLR 47 407 -2 29 0 0 0 chr5 8520175 8520204 -194565328 + AT_rich Low_complexity Low_complexity 1 29 0 2349 58 0 7 chr5 8520663 8520956 -194564576 + AluY SINE Alu 1 291 -20 2823 10 0 0 chr5 8520958 8521266 -194564266 + AluY SINE Alu 1 308 -3 1638 206 30 30 chr5 8523024 8523389 -194562143 + MLT1A1 LTR MaLR 1 365 0 417 292 64 9 chr5 8524442 8524661 -194560871 + L1MEc LINE L1 1585 1815 -4581 1066 219 99 44 chr5 8524700 8525153 -194560379 - Charlie1b DNA MER1_type -6 517 40 25 31 0 0 chr5 8525176 8525208 -194560324 + AT_rich Low_complexity Low_complexity 1 32 0 620 257 70 63 chr5 8525213 8526144 -194559388 + L1MEc LINE L1 1871 2769 -3446 797 253 64 9 chr5 8526165 8526584 -194558948 + L1MEc LINE L1 2819 3260 -2955 6019 200 70 20 chr5 8526627 8527965 -194557567 + L1MCa LINE L1 49 1475 -4951 2569 115 13 8 chr5 8527965 8528338 -194557194 - THE1C LTR MaLR 0 375 1 6019 200 70 20 chr5 8528338 8528537 -194556995 + L1MCa LINE L1 1475 1663 -4763 2978 218 60 42 chr5 8528542 8529672 -194555860 - L1M1 LINE L1 -4161 3405 2098 761 175 0 0 chr5 8529717 8529837 -194555695 - FLAM_C SINE Alu -19 124 5 2884 226 53 7 chr5 8529900 8530780 -194554752 + L1 LINE L1 3036 3956 -2190 37 23 0 0 chr5 8530911 8530955 -194554577 + AT_rich Low_complexity Low_complexity 1 44 0 1320 271 58 23 chr5 8531120 8531409 -194554123 + L1MCa LINE L1 3026 3303 -3123 2177 109 14 0 chr5 8531409 8531702 -194553830 + AluSx SINE Alu 1 297 -15 1320 271 58 23 chr5 8531702 8532120 -194553412 + L1MCa LINE L1 3303 3758 -2668 230 250 0 15 chr5 8532455 8532523 -194553009 + L1MC4 LINE L1 6637 6703 -1339 331 151 41 0 chr5 8532523 8532596 -194552936 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 188 247 108 11 chr5 8533078 8533171 -194552361 + MIR SINE MIR 21 122 -86 183 323 10 42 chr5 8533395 8533491 -194552041 + MIR SINE MIR 99 191 -71 207 255 20 0 chr5 8535092 8535143 -194550389 + CT-rich Low_complexity Low_complexity 3 54 0 1500 209 16 33 chr5 8535198 8535456 -194550076 - MLT1A1 LTR MaLR -2 363 111 2380 140 48 27 chr5 8535456 8535869 -194549663 + MSTB LTR MaLR 5 426 0 1500 209 16 33 chr5 8535869 8535978 -194549554 - MLT1A1 LTR MaLR -254 111 2 2308 82 0 0 chr5 8536548 8536840 -194548692 + AluY SINE Alu 6 297 -14 349 93 147 27 chr5 8537007 8537082 -194548450 - L1PB1 LINE L1 -1 6150 6067 185 261 22 0 chr5 8537148 8537194 -194548338 + MIR SINE MIR 56 102 -160 696 242 54 112 chr5 8537589 8538052 -194547480 - LTR40c LTR ERVL -29 436 1 862 185 42 21 chr5 8538986 8539175 -194546357 + MLT1D LTR MaLR 1 193 -312 3144 229 286 23 chr5 8539178 8541391 -194544141 + L1M3e LINE L1 1 2790 -4317 1687 184 44 49 chr5 8541395 8541802 -194543730 - MSTC LTR MaLR -23 405 1 3514 247 102 109 chr5 8541802 8543019 -194542513 - MSTC-int LTR MaLR 0 1735 434 705 134 0 0 chr5 8543019 8543297 -194542235 + AluSg/x SINE Alu 185 462 0 3514 247 102 109 chr5 8543297 8543727 -194541805 - MSTC-int LTR MaLR -1301 434 2 1621 176 116 59 chr5 8543729 8544133 -194541399 - MSTC LTR MaLR 0 428 2 1090 244 174 16 chr5 8544134 8544871 -194540661 + L1MA8 LINE L1 2919 3773 -3792 * 2961 192 40 38 chr5 8544867 8545485 -194540047 + L1MA8 LINE L1 4466 5088 -2477 1643 214 0 3 chr5 8545485 8545796 -194539736 + AluJb SINE Alu 1 310 0 2961 192 40 38 chr5 8545796 8546011 -194539521 + L1MA8 LINE L1 5088 5301 -2264 1708 166 15 207 chr5 8546179 8546908 -194538624 + MER21A LTR ERV1 70 658 -273 6914 153 39 6 chr5 8546908 8549161 -194536371 + L1MA8 LINE L1 5340 7656 -54 491 273 98 69 chr5 8549163 8549614 -194535918 + L2 LINE L2 2469 2932 -382 277 169 84 28 chr5 8549619 8549690 -194535842 + MLT1B LTR MaLR 2 76 -314 375 368 78 59 chr5 8550222 8550646 -194534886 + L2 LINE L2 2828 3259 -13 279 0 0 0 chr5 8550663 8550694 -194534838 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 213 307 64 45 chr5 8551777 8551979 -194533553 + L2 LINE L2 1623 1828 -1486 910 84 0 53 chr5 8552002 8552027 -194533505 + (TTCC)n Simple_repeat Simple_repeat 1 203 0 910 84 0 53 chr5 8552027 8552217 -194533315 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 433 145 29 29 chr5 8552242 8552380 -194533152 + CT-rich Low_complexity Low_complexity 3 140 0 223 331 72 22 chr5 8552595 8552734 -194532798 + L2 LINE L2 2976 3121 -192 353 304 22 14 chr5 8552867 8553005 -194532527 - MIR SINE MIR -59 203 65 3417 151 16 71 chr5 8553424 8554155 -194531377 + LTR8 LTR ERV1 1 691 0 230 285 174 25 chr5 8554248 8554483 -194531049 - MLT1J2 LTR MaLR -128 322 53 671 174 81 19 chr5 8557176 8557337 -194528195 + MLT1B LTR MaLR 3 173 -217 357 321 30 0 chr5 8557384 8557435 -194528097 + CT-rich Low_complexity Low_complexity 2 50 -86 1784 171 26 20 chr5 8557435 8557740 -194527792 - AluJb SINE Alu -2 310 4 357 321 30 0 chr5 8557740 8557819 -194527713 + CT-rich Low_complexity Low_complexity 50 136 0 1091 170 20 0 chr5 8557819 8558019 -194527513 + MLT1B LTR MaLR 187 390 0 268 337 22 17 chr5 8558290 8558451 -194527081 + MIR SINE MIR 9 165 -60 383 268 96 19 chr5 8558729 8558886 -194526646 + MIR SINE MIR 48 216 -46 2060 149 0 0 chr5 8560593 8560886 -194524646 + AluSx SINE Alu 1 296 -16 257 0 30 0 chr5 8560886 8560919 -194524613 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 2060 149 0 0 chr5 8560919 8560934 -194524598 + AluSx SINE Alu 295 309 -3 211 325 90 32 chr5 8561524 8561671 -194523861 - MIR SINE MIR -63 145 19 31 26 0 0 chr5 8561854 8561892 -194523640 + AT_rich Low_complexity Low_complexity 1 38 0 465 297 82 39 chr5 8562027 8562283 -194523249 - L1M4c LINE L1 -4905 1479 1213 342 335 5 5 chr5 8562307 8562498 -194523034 + L1MEc LINE L1 1518 1708 -4688 622 297 97 56 chr5 8562534 8563017 -194522515 + L1MEc LINE L1 1768 2332 -4064 834 272 119 48 chr5 8563052 8563451 -194522081 + L1M4 LINE L1 3908 4277 -1869 1764 203 7 47 chr5 8563451 8563855 -194521677 - MLT1B LTR MaLR -2 388 1 834 272 119 48 chr5 8563855 8564621 -194520911 + L1M4 LINE L1 4277 5156 -990 669 172 57 9 chr5 8565106 8565275 -194520257 + MSTC LTR MaLR 1 204 -224 315 132 0 0 chr5 8565309 8565362 -194520170 + MSTC LTR MaLR 364 416 -12 295 341 142 24 chr5 8565657 8566031 -194519501 + L2 LINE L2 1282 1752 -1562 2075 82 25 11 chr5 8566031 8566343 -194519189 + AluSx SINE Alu 1 316 0 295 341 142 24 chr5 8566343 8566553 -194518979 + L2 LINE L2 1752 1936 -1378 42 37 0 37 chr5 8567821 8567903 -194517629 + AT_rich Low_complexity Low_complexity 1 79 0 1230 186 125 18 chr5 8567939 8568106 -194517426 - AluJb SINE Alu -3 309 161 216 0 0 0 chr5 8568106 8568130 -194517402 + (TAG)n Simple_repeat Simple_repeat 1 24 0 1230 186 125 18 chr5 8568130 8568241 -194517291 - AluJb SINE Alu -151 161 1 285 248 133 0 chr5 8568616 8568729 -194516803 + LTR16A LTR ERVL 323 450 0 829 123 77 0 chr5 8568902 8569032 -194516500 - AluSg/x SINE Alu -16 294 155 264 233 0 0 chr5 8570045 8570118 -194515414 + (TG)n Simple_repeat Simple_repeat 2 74 0 238 314 58 23 chr5 8570326 8570498 -194515034 - MLT1J LTR MaLR -98 413 236 1035 156 19 0 chr5 8570545 8570705 -194514827 - U1 snRNA snRNA 0 165 3 228 297 44 0 chr5 8570766 8570857 -194514675 - MLT1J LTR MaLR -344 167 73 2508 122 8 3 chr5 8571031 8571393 -194514139 + THE1B LTR MaLR 1 364 0 611 111 11 0 chr5 8571700 8571790 -194513742 + AluSc SINE Alu 216 306 -3 211 383 47 0 chr5 8571993 8572100 -194513432 - MIR SINE MIR -20 242 131 384 219 117 16 chr5 8572196 8572324 -194513208 + MLT1K LTR MaLR 418 558 -30 2102 205 100 4 chr5 8574661 8575169 -194510363 - MER89 LTR ERV1 -2 557 1 216 364 64 12 chr5 8575197 8575370 -194510162 - MIR SINE MIR -60 202 21 11232 49 0 0 chr5 8575935 8578103 -194507429 + L1PA5 LINE L1 3983 6150 -4 2182 184 49 2 chr5 8578274 8578681 -194506851 - MSTB LTR MaLR 0 426 1 301 282 127 0 chr5 8579412 8579522 -194506010 - MER94 DNA DNA 0 134 11 454 144 0 44 chr5 8579737 8579827 -194505705 + AluS SINE Alu 223 308 -1 192 372 99 33 chr5 8580188 8580309 -194505223 - MIR3 SINE MIR -27 181 53 241 323 16 48 chr5 8580346 8580470 -194505062 - L2 LINE L2 -1 3312 3193 1531 230 53 45 chr5 8583457 8583949 -194501583 - MLT1D LTR MaLR -9 496 1 221 83 28 0 chr5 8584957 8584993 -194500539 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 8905 99 25 6 chr5 8585494 8586751 -194498781 + HSMAR1 DNA Mariner 4 1284 -3 241 233 27 0 chr5 8587418 8587491 -194498041 + L1MC4 LINE L1 6624 6698 -1344 221 276 0 0 chr5 8587502 8587560 -194497972 + (TA)n Simple_repeat Simple_repeat 2 59 0 2163 98 9 0 chr5 8589075 8589560 -194495972 + MER41A LTR ERV1 1 528 -107 295 309 11 0 chr5 8589573 8589667 -194495865 + L1ME LINE L1 3797 3891 -2255 1734 159 12 72 chr5 8590014 8590416 -194495116 + MLT1B LTR MaLR 13 390 0 346 298 116 0 chr5 8590902 8591083 -194494449 + MLT1G3 LTR MaLR 155 356 -174 422 327 186 4 chr5 8591664 8591927 -194493605 + L1ME LINE L1 5512 5822 -299 319 49 0 0 chr5 8591946 8591987 -194493545 + AluY SINE Alu 7 47 -255 2455 76 0 0 chr5 8592383 8592674 -194492858 - AluSg SINE Alu -19 291 1 321 26 0 0 chr5 8592714 8592752 -194492780 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 125 0 0 chr5 8593245 8593285 -194492247 + (TC)n Simple_repeat Simple_repeat 2 41 0 276 30 0 0 chr5 8593287 8593320 -194492212 + (CA)n Simple_repeat Simple_repeat 1 33 0 632 188 8 1 chr5 8593700 8593715 -194491817 + L1P5 LINE L1 5560 5573 -583 532 196 0 0 chr5 8593715 8593817 -194491715 - L1PB4 LINE L1 0 6156 6055 632 188 8 1 chr5 8593817 8593949 -194491583 + L1P5 LINE L1 5573 5706 -450 2576 34 0 3 chr5 8594236 8594533 -194490999 + AluY SINE Alu 1 296 -15 1375 206 23 30 chr5 8597178 8597479 -194488053 - AluJb SINE Alu -13 299 1 1179 252 72 31 chr5 8598841 8599285 -194486247 - MLT1C LTR MaLR -5 462 1 5354 101 14 9 chr5 8599442 8600247 -194485285 + L1PA13 LINE L1 5347 6155 -8 667 182 35 0 chr5 8601203 8601346 -194484186 - L1 LINE L1 -900 5246 5099 859 194 66 0 chr5 8601379 8601590 -194483942 + L1M3 LINE L1 5254 5478 -856 2063 109 0 18 chr5 8601726 8602034 -194483498 - AluSg SINE Alu 0 303 1 2664 249 61 17 chr5 8602058 8603341 -194482191 - L1ME1 LINE L1 -5 6144 4808 1139 266 57 36 chr5 8603342 8604067 -194481465 - L1ME1 LINE L1 -4412 1898 1122 2243 118 3 0 chr5 8604257 8604562 -194480970 + AluSx SINE Alu 1 306 -6 323 288 75 27 chr5 8604738 8604884 -194480648 - L1ME1 LINE L1 -5917 202 50 2235 107 3 3 chr5 8605544 8605843 -194479689 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr5 8608214 8608235 -194477297 + AT_rich Low_complexity Low_complexity 1 21 0 203 244 0 110 chr5 8608397 8608479 -194477053 + L2 LINE L2 3137 3209 -63 252 122 0 0 chr5 8611029 8611070 -194474462 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 2181 122 81 57 chr5 8612989 8613171 -194472361 - MSTA LTR MaLR 0 428 252 2284 68 0 4 chr5 8613171 8613452 -194472080 - AluY SINE Alu -4 307 28 2181 122 81 57 chr5 8613452 8613687 -194471845 - MSTA LTR MaLR -176 252 1 236 224 0 26 chr5 8617673 8617716 -194467816 + A-rich Low_complexity Low_complexity 5 47 -31 1245 51 0 0 chr5 8617716 8617872 -194467660 + L1PA5 LINE L1 5998 6153 -1 236 224 0 26 chr5 8617872 8617904 -194467628 + A-rich Low_complexity Low_complexity 47 78 0 1729 167 3 15 chr5 8618207 8618537 -194466995 + L1MC/D LINE L1 5426 5751 -2034 4130 141 65 23 chr5 8618650 8619436 -194466096 - LTR1B LTR ERV1 -7 819 1 21 36 0 0 chr5 8619754 8619782 -194465750 + AT_rich Low_complexity Low_complexity 1 28 0 224 344 57 8 chr5 8622303 8622425 -194463107 - MIR SINE MIR -66 196 69 385 274 76 32 chr5 8622491 8622648 -194462884 - MIR SINE MIR -13 249 86 180 0 0 0 chr5 8624930 8624950 -194460582 + (T)n Simple_repeat Simple_repeat 1 20 0 509 159 215 0 chr5 8626541 8626648 -194458884 + FLAM_A SINE Alu 1 130 -3 4396 140 12 65 chr5 8627348 8628264 -194457268 - L1MA4 LINE L1 -6 6294 5428 2697 167 55 2 chr5 8628264 8628919 -194456613 + L1MA4 LINE L1 4743 5437 -743 6063 241 66 22 chr5 8629034 8630667 -194454865 + L1ME1 LINE L1 2359 4129 -2017 2570 71 0 0 chr5 8630667 8630976 -194454556 + AluY SINE Alu 1 309 -2 6063 241 66 22 chr5 8630976 8631720 -194453812 + L1ME1 LINE L1 4129 4839 -1307 616 204 6 78 chr5 8631724 8631891 -194453641 + Tigger2a DNA MER2_type 1 155 -279 729 200 8 0 chr5 8631907 8632032 -194453500 + Tigger2a DNA MER2_type 308 433 -1 2147 233 69 32 chr5 8632050 8633325 -194452207 + L1ME1 LINE L1 4858 6332 -2 2075 164 42 11 chr5 8633340 8633718 -194451814 + MLT1B LTR MaLR 1 390 0 248 302 129 72 chr5 8634852 8635170 -194450362 + L2 LINE L2 2931 3266 -6 272 339 74 83 chr5 8635230 8635664 -194449868 - L2 LINE L2 -1 3271 2842 264 30 0 0 chr5 8635839 8635872 -194449660 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 2243 148 28 14 chr5 8637322 8637681 -194447851 + THE1B LTR MaLR 1 364 0 11591 92 14 2 chr5 8637681 8639242 -194446290 + THE1B-int LTR MaLR 1 1580 0 2358 112 27 33 chr5 8639242 8639608 -194445924 + THE1B LTR MaLR 1 364 0 180 200 0 0 chr5 8640092 8640132 -194445400 + (TAG)n Simple_repeat Simple_repeat 3 42 0 225 224 20 0 chr5 8640509 8640558 -194444974 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 23 54 0 0 chr5 8640819 8640856 -194444676 + AT_rich Low_complexity Low_complexity 1 37 0 333 235 43 17 chr5 8640962 8641077 -194444455 - MER97b DNA MER1_type? 0 1053 936 6955 194 30 9 chr5 8641249 8643378 -194442154 + L1M3f LINE L1 5 2180 -4065 823 209 0 0 chr5 8643423 8643614 -194441918 + L1M3f LINE L1 2917 3107 -3221 * 1617 206 0 8 chr5 8643612 8643985 -194441547 + L1MA4 LINE L1 5902 6271 -29 21 0 0 0 chr5 8643994 8644015 -194441517 + AT_rich Low_complexity Low_complexity 1 21 0 637 213 94 35 chr5 8645180 8645382 -194440150 - MER97a DNA MER1_type? -307 587 374 1970 228 2 4 chr5 8645382 8645848 -194439684 + L1MC3 LINE L1 5523 5987 -1798 375 250 17 17 chr5 8645845 8645965 -194439567 + L1MC3 LINE L1 6739 6858 -927 * 1550 205 92 49 chr5 8646179 8646402 -194439130 + L1MD3 LINE L1 6874 7086 -909 412 194 0 0 chr5 8646402 8646469 -194439063 + MLT1F1 LTR MaLR 45 111 -456 1550 205 92 49 chr5 8646469 8646885 -194438647 + L1MD3 LINE L1 7086 7822 -173 1543 193 84 11 chr5 8646893 8647272 -194438260 + MER50 LTR ERV1 328 734 0 536 269 105 45 chr5 8647290 8647442 -194438090 + L2 LINE L2 2762 2903 -410 3231 136 73 25 chr5 8647442 8648045 -194437487 + MER41B LTR ERV1 3 634 -1 536 269 105 45 chr5 8648045 8648330 -194437202 + L2 LINE L2 2903 3240 -73 23 0 0 0 chr5 8649228 8649251 -194436281 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 8649699 8649720 -194435812 + AT_rich Low_complexity Low_complexity 1 21 0 306 163 70 35 chr5 8651391 8651477 -194434055 - MIR SINE MIR -2 260 172 314 340 41 46 chr5 8651488 8651612 -194433920 + L2 LINE L2 3075 3199 -73 2005 153 95 5 chr5 8651612 8652003 -194433529 + MSTB LTR MaLR 1 426 0 314 340 41 46 chr5 8652003 8652072 -194433460 + L2 LINE L2 3199 3267 -5 278 232 254 17 chr5 8652219 8652396 -194433136 + L2 LINE L2 1934 2152 -1162 324 309 49 29 chr5 8652717 8652921 -194432611 - MER112 DNA MER1_type 0 260 53 28 0 0 0 chr5 8654910 8654938 -194430594 + AT_rich Low_complexity Low_complexity 1 28 0 683 283 107 54 chr5 8655982 8656374 -194429158 - L2 LINE L2 -1 3312 2900 183 184 0 0 chr5 8656747 8656785 -194428747 + GA-rich Low_complexity Low_complexity 1 38 0 2487 57 7 0 chr5 8658818 8659115 -194426417 - AluY SINE Alu -10 301 3 207 0 0 0 chr5 8659565 8659588 -194425944 + (A)n Simple_repeat Simple_repeat 1 23 0 24 67 0 0 chr5 8660266 8660311 -194425221 + AT_rich Low_complexity Low_complexity 1 45 0 25 31 0 0 chr5 8661975 8662007 -194423525 + AT_rich Low_complexity Low_complexity 1 32 0 246 292 93 30 chr5 8662602 8662824 -194422708 + L1ME LINE L1 5563 5791 -330 254 87 0 0 chr5 8663048 8663094 -194422438 - LTR66 LTR ERVL -171 439 394 306 216 0 0 chr5 8663094 8663168 -194422364 + (CA)n Simple_repeat Simple_repeat 2 75 0 279 104 0 0 chr5 8663296 8663344 -194422188 + (TA)n Simple_repeat Simple_repeat 2 49 0 27 29 0 0 chr5 8664601 8664635 -194420897 + AT_rich Low_complexity Low_complexity 1 34 0 1042 256 109 6 chr5 8666278 8666590 -194418942 - MER2 DNA MER2_type 0 344 1 1678 153 48 30 chr5 8666689 8666984 -194418548 - AluJb SINE Alu -12 300 1 184 235 153 35 chr5 8666984 8667058 -194418474 + MIR SINE MIR 56 143 -65 303 319 30 0 chr5 8667270 8667436 -194418096 + (CACAA)n Simple_repeat Simple_repeat 4 174 0 460 248 9 0 chr5 8668163 8668268 -194417264 + MER3 DNA MER1_type 98 203 -6 1043 241 101 3 chr5 8668558 8668844 -194416688 + LTR16A LTR ERVL 137 450 0 267 311 74 10 chr5 8668844 8669165 -194416367 + HERV16 LTR ERVL 1 361 -4635 616 310 76 14 chr5 8669348 8669703 -194415829 + HERV16 LTR ERVL 579 955 -4041 712 285 96 17 chr5 8669707 8670116 -194415416 + HERV16 LTR ERVL 1619 2079 -2917 * 1096 347 86 33 chr5 8670110 8671073 -194414459 + HERV16 LTR ERVL 2186 3199 -2565 527 234 0 8 chr5 8671119 8671243 -194414289 + LTR16A LTR ERVL 275 397 -53 845 50 0 0 chr5 8671392 8671492 -194414040 - AluSg/x SINE Alu -7 305 206 945 211 83 5 chr5 8672267 8672471 -194413061 - MER58A DNA MER1_type -3 221 2 22 35 0 0 chr5 8673483 8673512 -194412020 + AT_rich Low_complexity Low_complexity 1 29 0 699 297 29 21 chr5 8674005 8674244 -194411288 - MIR SINE MIR -6 256 16 783 223 217 0 chr5 8675980 8676164 -194409368 + MER58A DNA MER1_type 1 224 0 198 0 0 0 chr5 8676267 8676289 -194409243 + (A)n Simple_repeat Simple_repeat 1 22 0 677 239 17 33 chr5 8676756 8676936 -194408596 + MER5B DNA MER1_type 1 177 -1 188 300 20 15 chr5 8677027 8677122 -194408410 - MER5A DNA MER1_type -65 113 18 213 132 26 0 chr5 8677206 8677244 -194408288 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 210 319 115 18 chr5 8680347 8680460 -194405072 + MIR SINE MIR 41 164 -98 206 305 34 0 chr5 8680929 8680988 -194404544 + L2 LINE L2 3212 3272 0 321 306 106 82 chr5 8681486 8681731 -194403801 + L1M2 LINE L1 882 1132 -5717 461 249 216 16 chr5 8682386 8682571 -194402961 + MIR SINE MIR 18 239 -23 207 0 0 0 chr5 8682654 8682677 -194402855 + (T)n Simple_repeat Simple_repeat 1 23 0 576 317 93 21 chr5 8685707 8686327 -194399205 - L1MC4a LINE L1 -725 5575 5298 30 45 0 0 chr5 8686490 8686534 -194398998 + AT_rich Low_complexity Low_complexity 1 44 0 1054 144 76 79 chr5 8686563 8686728 -194398804 - L1MA8 LINE L1 -6 6285 6140 2243 109 3 3 chr5 8686728 8687040 -194398492 + AluSq SINE Alu 2 313 0 1054 144 76 79 chr5 8687040 8687155 -194398377 - L1MA8 LINE L1 -151 6140 6026 1518 170 4 0 chr5 8687259 8687494 -194398038 - MER46A DNA MER2_type 0 236 1 497 313 55 11 chr5 8688189 8688371 -194397161 + MIR SINE MIR 16 205 -57 1007 132 111 16 chr5 8688417 8688607 -194396925 - MER3 DNA MER1_type -1 208 1 22 35 0 0 chr5 8689443 8689472 -194396060 + AT_rich Low_complexity Low_complexity 1 29 0 28 61 0 0 chr5 8689546 8689595 -194395937 + AT_rich Low_complexity Low_complexity 1 49 0 962 246 89 32 chr5 8689800 8690113 -194395419 - MER93a LTR ERV1 -2 400 70 530 259 7 34 chr5 8691122 8691269 -194394263 - L2 LINE L2 -4 3309 3167 29 0 0 0 chr5 8691606 8691635 -194393897 + AT_rich Low_complexity Low_complexity 1 29 0 267 285 100 12 chr5 8692194 8692380 -194393152 + MIR SINE MIR 2 256 -6 21 36 0 0 chr5 8693656 8693684 -194391848 + AT_rich Low_complexity Low_complexity 1 28 0 183 114 0 0 chr5 8694093 8694128 -194391404 + (A)n Simple_repeat Simple_repeat 1 35 0 1201 246 111 33 chr5 8694540 8694963 -194390569 + LTR65 LTR ERV1 167 622 -47 671 207 133 0 chr5 8695228 8695363 -194390169 + FRAM SINE Alu 5 157 -9 604 258 72 70 chr5 8695412 8695928 -194389604 - L1MC5 LINE L1 -137 7824 7308 1788 86 3 111 chr5 8695944 8696123 -194389409 + MLT2A2 LTR ERVL 173 305 -148 2319 93 75 9 chr5 8696123 8696456 -194389076 + THE1A LTR MaLR 1 355 0 1788 86 3 111 chr5 8696456 8696591 -194388941 + MLT2A2 LTR ERVL 305 453 0 230 257 139 59 chr5 8697187 8697374 -194388158 + LTR16C LTR ERVL 262 463 -28 2443 120 24 24 chr5 8697422 8697796 -194387736 - THE1C LTR MaLR 0 375 2 219 356 110 34 chr5 8698723 8699015 -194386517 + L2 LINE L2 2811 3124 -189 247 293 0 13 chr5 8699026 8699101 -194386431 - L1ME3A LINE L1 -43 6127 6054 345 236 0 0 chr5 8699188 8699260 -194386272 + MER3 DNA MER1_type 43 114 -95 283 165 0 8 chr5 8699264 8699350 -194386182 + MER3 DNA MER1_type 2472 2624 0 238 263 168 0 chr5 8699395 8699490 -194386042 + L2 LINE L2 3180 3290 -23 331 272 218 63 chr5 8700012 8700563 -194384969 - L1M2 LINE L1 -5563 1286 446 1576 232 13 33 chr5 8701684 8701884 -194383648 + MLT1B LTR MaLR 1 191 -199 2638 116 16 8 chr5 8701884 8702256 -194383276 - THE1C LTR MaLR 0 375 1 1576 232 13 33 chr5 8702256 8702452 -194383080 + MLT1B LTR MaLR 191 389 -1 941 221 77 10 chr5 8703227 8703435 -194382097 + MER58A DNA MER1_type 3 224 0 1489 163 16 16 chr5 8703864 8704116 -194381416 + AluSx SINE Alu 36 287 -25 2150 164 3 6 chr5 8704203 8704556 -194380976 + MLT1A1 LTR MaLR 1 352 -13 263 301 206 19 chr5 8704612 8704821 -194380711 + MIR SINE MIR 15 262 0 2114 143 40 27 chr5 8705571 8705941 -194379591 + THE1C LTR MaLR 1 375 0 513 299 64 5 chr5 8706253 8706457 -194379075 + L2 LINE L2 3098 3313 0 766 247 86 0 chr5 8707938 8708112 -194377420 - MER63A DNA MER1_type -4 206 18 509 271 129 78 chr5 8708143 8708516 -194377016 - MLT1J2 LTR MaLR -58 392 1 1834 183 113 26 chr5 8708770 8708882 -194376650 - MLT1C LTR MaLR -7 460 359 6237 90 66 0 chr5 8708882 8709912 -194375620 - L1PA11 LINE L1 -1 6173 5112 1834 183 113 26 chr5 8709912 8710215 -194375317 - MLT1C LTR MaLR -108 359 9 2359 118 30 28 chr5 8711586 8711949 -194373583 + THE1B LTR MaLR 1 364 0 304 258 132 60 chr5 8712618 8712785 -194372747 - L1M4 LINE L1 -1087 5059 4881 196 370 47 24 chr5 8713121 8713248 -194372284 + L2 LINE L2 3133 3262 -10 196 151 19 19 chr5 8713749 8713802 -194371730 + (TA)n Simple_repeat Simple_repeat 1 53 0 1995 222 80 34 chr5 8713897 8714513 -194371019 + LTR48B LTR ERV1 1 644 0 2064 174 11 6 chr5 8714675 8715038 -194370494 + MLT1A1 LTR MaLR 1 365 0 1013 153 0 6 chr5 8715551 8715708 -194369824 + Tigger1 DNA MER2_type 2 157 -2261 * 1242 153 38 0 chr5 8715697 8715906 -194369626 + Tigger1 DNA MER2_type 2202 2418 0 6883 118 46 55 chr5 8715944 8717186 -194368346 - Tigger3b DNA MER2_type 0 1231 1 336 322 0 0 chr5 8717186 8717273 -194368259 + L1MC4 LINE L1 6617 6703 -1339 393 212 11 43 chr5 8717332 8717516 -194368016 + (TATG)n Simple_repeat Simple_repeat 1 178 0 341 314 20 0 chr5 8717518 8717620 -194367912 + (TATATG)n Simple_repeat Simple_repeat 5 108 0 2148 83 52 3 chr5 8718090 8718380 -194367152 + AluSx SINE Alu 1 304 -8 229 371 8 8 chr5 8719703 8719827 -194365705 + MIR SINE MIR 20 143 -119 1857 147 13 7 chr5 8720772 8721078 -194364454 - AluJo SINE Alu -4 308 1 205 283 22 76 chr5 8721491 8721583 -194363949 + MIR SINE MIR 60 146 -116 679 189 16 74 chr5 8721593 8721783 -194363749 - MER5A DNA MER1_type -7 182 4 336 319 17 9 chr5 8722466 8722582 -194362950 - MIR SINE MIR -124 138 22 304 221 85 79 chr5 8724201 8724384 -194361148 + L1ME LINE L1 5550 5745 -419 261 163 0 0 chr5 8728127 8728176 -194357356 + (CA)n Simple_repeat Simple_repeat 1 49 0 228 330 34 0 chr5 8729248 8729336 -194356196 + L2 LINE L2 3181 3271 -42 1943 145 0 3 chr5 8730363 8730667 -194354865 - AluJb SINE Alu -9 303 1 3425 92 11 0 chr5 8731560 8732008 -194353524 + MLT2A2 LTR ERVL 1 453 0 542 125 125 0 chr5 8732214 8732302 -194353230 + AluSq/x SINE Alu 34 132 -180 1444 124 0 0 chr5 8732324 8732533 -194352999 + AluSg/x SINE Alu 102 310 0 1955 139 13 3 chr5 8733024 8733333 -194352199 - AluJb SINE Alu 0 312 1 442 193 9 55 chr5 8733476 8733585 -194351947 + MER104 DNA Tc2 1 104 -76 316 280 99 49 chr5 8734433 8734676 -194350856 + LTR33 LTR ERVL 106 360 -161 2265 157 13 18 chr5 8734680 8735068 -194350464 + MLT1B LTR MaLR 3 388 -2 449 331 43 0 chr5 8735550 8735689 -194349843 + L2 LINE L2 3122 3266 -6 857 198 8 88 chr5 8736334 8736572 -194348960 - MER20 DNA MER1_type 0 219 1 249 333 0 0 chr5 8737576 8737639 -194347893 - L2 LINE L2 -5 3267 3205 597 246 18 53 chr5 8737793 8737950 -194347582 + MIR SINE MIR 1 151 -111 1965 123 0 7 chr5 8737950 8738252 -194347280 - AluSx SINE Alu -12 300 1 597 246 18 53 chr5 8738252 8738314 -194347218 + MIR SINE MIR 151 214 -48 30 69 0 0 chr5 8739270 8739328 -194346204 + AT_rich Low_complexity Low_complexity 1 58 0 2326 73 3 0 chr5 8739357 8739657 -194345875 - AluY SINE Alu -10 301 1 278 292 42 0 chr5 8740069 8740165 -194345367 - Charlie8 DNA MER1_type -2134 283 184 297 366 6 0 chr5 8740259 8740431 -194345101 + (CCAA)n Simple_repeat Simple_repeat 2 174 0 242 322 132 0 chr5 8741766 8741887 -194343645 - MIR SINE MIR -14 248 112 501 274 9 50 chr5 8742207 8742387 -194343145 + MIR SINE MIR 5 182 -51 238 293 102 32 chr5 8742822 8742979 -194342553 - MER5A DNA MER1_type -14 175 8 905 189 13 44 chr5 8743898 8744067 -194341465 - MER96B DNA MER1_type? -8 409 247 1237 231 12 82 chr5 8744067 8744469 -194341063 + MLT1A2 LTR MaLR 1 374 0 905 189 13 44 chr5 8744469 8744526 -194341006 - MER96B DNA MER1_type? -170 247 190 180 0 0 0 chr5 8745400 8745420 -194340112 + (TC)n Simple_repeat Simple_repeat 1 20 0 1686 154 3 20 chr5 8745552 8745844 -194339688 - AluJb SINE Alu -25 287 1 312 27 0 0 chr5 8746803 8746840 -194338692 + (TC)n Simple_repeat Simple_repeat 1 37 0 239 224 60 15 chr5 8746887 8746954 -194338578 + L1MC4 LINE L1 6634 6703 -1339 21 0 0 0 chr5 8746954 8746975 -194338557 + AT_rich Low_complexity Low_complexity 1 21 0 1541 192 0 3 chr5 8746975 8747261 -194338271 - AluJo SINE Alu -27 285 1 2159 105 0 0 chr5 8750202 8750496 -194335036 - AluSg SINE Alu -16 294 1 653 236 61 30 chr5 8750591 8750793 -194334739 - MIR SINE MIR 0 262 50 298 366 6 19 chr5 8751028 8751189 -194334343 + MER5B DNA MER1_type 18 176 -2 2276 61 40 0 chr5 8752011 8752307 -194333225 + AluY SINE Alu 1 308 -3 391 262 58 0 chr5 8753310 8753413 -194332119 - L2 LINE L2 -27 3245 3137 1055 186 29 5 chr5 8754834 8755185 -194330347 + Tigger1 DNA MER2_type 2 2413 -5 208 271 0 0 chr5 8755632 8755680 -194329852 - MIR SINE MIR -21 241 194 1850 142 0 13 chr5 8757429 8757731 -194327801 - AluSg SINE Alu -12 298 1 366 144 0 4 chr5 8757680 8757748 -194327784 - Alu SINE Alu -250 51 2 245 382 45 6 chr5 8758030 8758187 -194327345 - MIR SINE MIR -80 182 20 2252 86 7 23 chr5 8758487 8758791 -194326741 - AluSq SINE Alu -14 299 1 952 201 106 82 chr5 8759632 8760266 -194325266 + MER4C LTR ERV1 10 465 0 2152 128 0 13 chr5 8762401 8762714 -194322818 + AluSx SINE Alu 1 309 -3 376 118 40 0 chr5 8763169 8763245 -194322287 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 498 265 53 52 chr5 8763366 8763624 -194321908 + MLT1D LTR MaLR 5 254 -213 294 323 150 18 chr5 8767397 8767623 -194317909 + MIR SINE MIR 7 262 0 1825 240 33 7 chr5 8769153 8769603 -194315929 - MLT1C LTR MaLR 0 467 6 290 87 22 0 chr5 8769658 8769704 -194315828 + (TC)n Simple_repeat Simple_repeat 1 47 0 289 169 68 0 chr5 8773406 8773465 -194312067 - L2 LINE L2 -1 3312 3250 1995 199 56 79 chr5 8773700 8774267 -194311265 - MLT2B3 LTR ERVL 0 554 1 207 0 0 0 chr5 8774598 8774621 -194310911 + (T)n Simple_repeat Simple_repeat 1 23 0 1440 86 16 67 chr5 8775038 8775126 -194310406 + L1MA1 LINE L1 6054 6145 -157 2133 127 0 0 chr5 8775126 8775417 -194310115 + AluSx SINE Alu 3 293 -19 1440 86 16 67 chr5 8775417 8775434 -194310098 + L1MA1 LINE L1 6145 6161 -141 1919 159 10 3 chr5 8775434 8775558 -194309974 + AluSx SINE Alu 1 123 -189 276 100 0 0 chr5 8775558 8775598 -194309934 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 321 26 0 0 chr5 8775601 8775639 -194309893 + (CA)n Simple_repeat Simple_repeat 1 38 0 1919 159 10 3 chr5 8775639 8775811 -194309721 + AluSx SINE Alu 124 303 -9 1440 86 16 67 chr5 8775811 8775959 -194309573 + L1MA1 LINE L1 6161 6295 -7 23 0 0 0 chr5 8776769 8776792 -194308740 + AT_rich Low_complexity Low_complexity 1 23 0 1079 201 5 33 chr5 8777225 8777439 -194308093 + MER20 DNA MER1_type 6 213 -6 234 280 30 40 chr5 8778632 8778732 -194306800 + MIR SINE MIR 72 170 -92 595 167 118 73 chr5 8779809 8780013 -194305519 + MER5C DNA MER1_type 111 323 -1 333 301 10 10 chr5 8781029 8781132 -194304400 + MIR SINE MIR 110 212 -50 270 270 119 46 chr5 8781196 8781744 -194303788 - L1ME4a LINE L1 -4 6117 5530 2364 96 0 3 chr5 8782764 8783066 -194302466 - AluY SINE Alu -10 301 1 231 152 0 0 chr5 8784837 8784883 -194300649 + CT-rich Low_complexity Low_complexity 1 46 0 181 354 104 11 chr5 8785862 8786122 -194299410 - L3b LINE CR1 -197 1386 1103 1445 217 15 6 chr5 8787087 8787414 -194298118 + L1MB3 LINE L1 5853 6182 -1 2424 45 10 3 chr5 8787423 8787715 -194297817 + AluY SINE Alu 1 294 -17 300 70 0 0 chr5 8787723 8787766 -194297766 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2306 111 141 5 chr5 8838784 8839161 -194246371 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 8840390 8840412 -194245120 + AT_rich Low_complexity Low_complexity 1 22 0 225 154 0 0 chr5 8841476 8841515 -194244017 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2311 114 0 3 chr5 8842328 8842636 -194242896 + AluSx SINE Alu 1 307 -5 275 254 30 0 chr5 8843413 8843480 -194242052 + LTR16C LTR ERVL 414 482 -9 587 294 95 5 chr5 8847236 8847447 -194238085 + MLT1I LTR MaLR 99 328 -81 458 337 15 10 chr5 8848697 8848902 -194236630 - MIR SINE MIR -6 256 51 668 207 8 139 chr5 8850512 8850763 -194234769 - MER20 DNA MER1_type 0 219 2 401 246 215 26 chr5 8850903 8851098 -194234434 - MLT1J LTR MaLR -279 232 1 239 333 139 19 chr5 8851140 8851608 -194233924 + L2 LINE L2 2364 2887 -427 226 255 53 75 chr5 8851854 8851948 -194233584 + L2 LINE L2 3177 3268 -4 238 302 191 0 chr5 8852046 8852172 -194233360 + MIR3 SINE MIR 36 185 -23 202 143 41 0 chr5 8852321 8852370 -194233162 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 643 251 86 67 chr5 8853056 8853487 -194232045 - MLT1H LTR MaLR -4 545 107 2336 96 0 3 chr5 8853583 8853897 -194231635 - AluSq SINE Alu 0 313 1 2567 61 0 10 chr5 8855698 8856010 -194229522 - AluY SINE Alu -2 309 1 370 289 16 0 chr5 8857248 8857376 -194228156 + MER20 DNA MER1_type 86 215 -4 183 42 0 0 chr5 8857425 8857449 -194228083 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1566 164 3 66 chr5 8857449 8857599 -194227933 - AluJb SINE Alu -32 280 157 297 0 0 0 chr5 8857599 8857632 -194227900 + (TA)n Simple_repeat Simple_repeat 1 33 0 1566 164 3 66 chr5 8857632 8857780 -194227752 - AluJb SINE Alu -155 157 1 910 220 33 19 chr5 8857998 8858212 -194227320 - MER58B DNA MER1_type 0 341 125 992 151 0 41 chr5 8858229 8858401 -194227131 + AluJb SINE Alu 129 293 -19 547 213 0 0 chr5 8858402 8858496 -194227036 - MER58B DNA MER1_type -245 96 3 301 252 42 84 chr5 8858888 8859031 -194226501 + MIR3 SINE MIR 21 157 -51 2180 135 37 6 chr5 8859984 8860311 -194225221 + MER1B DNA MER1_type 2 338 -1 500 219 144 31 chr5 8861223 8861383 -194224149 + MER112 DNA MER1_type 81 258 -2 1909 125 133 77 chr5 8862395 8862787 -194222745 - MLT2D LTR ERVL 0 414 1 201 330 70 26 chr5 8864194 8864309 -194221223 + MIR SINE MIR 14 133 -129 2237 64 0 0 chr5 8864333 8864599 -194220933 + AluY SINE Alu 1 266 -45 2639 58 0 0 chr5 8864763 8865072 -194220460 + AluY SINE Alu 1 309 -2 5638 68 36 21 chr5 8865678 8866433 -194219099 - MER4E LTR ERV1 0 766 1 487 247 0 0 chr5 8868810 8868903 -194216629 + MLT1D LTR MaLR 2 94 -411 * 1046 249 179 18 chr5 8868902 8869399 -194216133 + Charlie7 DNA MER1_type 1738 2314 -298 444 219 17 0 chr5 8869400 8869519 -194216013 - L1M4c LINE L1 -3968 2416 2296 283 208 179 1 chr5 8869534 8869766 -194215766 + Charlie7 DNA MER1_type 2320 2604 -8 2379 168 49 35 chr5 8870016 8870468 -194215064 + MLT2C2 LTR ERVL 1 458 -6 549 99 0 0 chr5 8870600 8870681 -194214851 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 1374 229 4 0 chr5 8870684 8870955 -194214577 - L1PA16 LINE L1 0 6166 5895 1446 217 113 29 chr5 8871844 8872226 -194213306 + MLT2D LTR ERVL 1 414 0 877 141 82 0 chr5 8872309 8872444 -194213088 + AluSg/x SINE Alu 140 285 -27 315 0 0 0 chr5 8872461 8872496 -194213036 + (CA)n Simple_repeat Simple_repeat 2 36 0 1865 137 70 23 chr5 8873681 8874024 -194211508 - MER46B DNA MER2_type 0 236 3 2325 109 3 0 chr5 8874542 8874854 -194210678 + AluSq SINE Alu 1 313 0 1920 199 119 19 chr5 8875160 8875632 -194209900 + MLT2B1 LTR ERVL 2 520 0 537 272 380 19 chr5 8876314 8877001 -194208531 + L2 LINE L2 1460 2394 -920 1639 68 5 14 chr5 8877276 8877483 -194208049 - AluY SINE Alu -17 294 90 201 255 0 20 chr5 8877922 8877973 -194207559 + CT-rich Low_complexity Low_complexity 3 52 0 2004 126 0 4 chr5 8878794 8879072 -194206460 + AluSc SINE Alu 1 277 -32 246 62 0 0 chr5 8879072 8879104 -194206428 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2634 79 18 147 chr5 8879144 8879653 -194205879 + MLT2A1 LTR ERVL 2 444 0 1241 272 139 18 chr5 8880601 8880639 -194204893 - L2 LINE L2 -456 2858 2826 291 71 0 0 chr5 8880639 8880681 -194204851 + (TG)n Simple_repeat Simple_repeat 1 42 0 1241 272 139 18 chr5 8880681 8881323 -194204209 - L2 LINE L2 -488 2826 2095 271 318 12 0 chr5 8882815 8882900 -194202632 - MIR3 SINE MIR -11 197 112 301 231 15 0 chr5 8883590 8883655 -194201877 - MIR SINE MIR -93 169 104 185 164 0 18 chr5 8884528 8884583 -194200949 + (TA)n Simple_repeat Simple_repeat 1 54 0 444 334 50 21 chr5 8884774 8885112 -194200420 - HAL1 LINE L1 -752 1755 1408 424 306 32 19 chr5 8885726 8885883 -194199649 - MIR SINE MIR -87 175 17 25 65 0 0 chr5 8886848 8886894 -194198638 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr5 8886949 8886980 -194198552 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 8887890 8887912 -194197620 + AT_rich Low_complexity Low_complexity 1 22 0 2464 126 36 0 chr5 8887924 8888313 -194197219 - L1PA15-16 LINE L1 -4100 2749 2347 5490 133 16 10 chr5 8888313 8889351 -194196181 + L1PA16 LINE L1 5053 6096 -70 2343 125 46 8 chr5 8891781 8892132 -194193400 - THE1B LTR MaLR 0 364 1 27 49 0 0 chr5 8893160 8893201 -194192331 + AT_rich Low_complexity Low_complexity 1 41 0 1796 106 152 8 chr5 8893481 8893745 -194191787 - AluSx SINE Alu 0 302 1 1710 312 114 23 chr5 8893964 8894263 -194191269 + L2 LINE L2 1742 2012 -1301 4584 190 76 8 chr5 8894263 8895105 -194190427 - MER54A LTR ERVL 0 901 3 1710 312 114 23 chr5 8895105 8896215 -194189317 + L2 LINE L2 2012 3283 -30 2454 71 0 16 chr5 8897477 8897785 -194187747 - AluSx SINE Alu -9 303 1 214 234 168 28 chr5 8899479 8899586 -194185946 + MIR SINE MIR 71 192 -70 1163 215 12 32 chr5 8899593 8899839 -194185693 + MLT1D LTR MaLR 2 242 -263 * 1327 220 19 38 chr5 8899829 8899842 -194185690 + MLT1D LTR MaLR 194 206 -299 1643 159 17 30 chr5 8899842 8900144 -194185388 + AluSx SINE Alu 1 298 -14 1327 220 19 38 chr5 8900144 8900448 -194185084 + MLT1D LTR MaLR 206 505 0 397 213 12 0 chr5 8903067 8903147 -194182385 + L2 LINE L2 3232 3312 -1 2535 137 40 28 chr5 8904050 8904474 -194181058 + MSTB1 LTR MaLR 4 432 0 511 255 156 45 chr5 8904949 8905192 -194180340 + MLT1H LTR MaLR 39 308 -241 406 289 104 66 chr5 8905376 8905829 -194179703 - L1ME4a LINE L1 -1 6120 5651 351 264 82 0 chr5 8905833 8905943 -194179589 - L1ME4a LINE L1 -490 5631 5513 194 291 89 25 chr5 8906839 8906918 -194178614 - MIR3 SINE MIR -15 193 110 202 208 30 79 chr5 8907033 8907134 -194178398 + (TG)n Simple_repeat Simple_repeat 1 96 0 22 0 0 0 chr5 8908645 8908667 -194176865 + AT_rich Low_complexity Low_complexity 1 22 0 183 250 36 18 chr5 8909325 8909381 -194176151 - MIR SINE MIR -110 152 96 280 300 47 33 chr5 8909678 8909828 -194175704 + L3 LINE CR1 1124 1275 -302 839 174 47 0 chr5 8913460 8913603 -194171929 - MLT1B LTR MaLR -23 367 218 870 207 59 104 chr5 8913603 8913972 -194171560 - MLT1A1 LTR MaLR 0 428 10 * 1171 127 31 75 chr5 8913971 8914199 -194171333 - MLT1B LTR MaLR -172 218 1 1750 222 79 35 chr5 8914766 8915274 -194170258 - MER119 DNA MER1_type 0 583 54 28 48 0 0 chr5 8915332 8915374 -194170158 + AT_rich Low_complexity Low_complexity 1 42 0 874 266 89 29 chr5 8915585 8915671 -194169861 - LTR33 LTR ERVL -103 418 339 2429 107 133 13 chr5 8915671 8916053 -194169479 + MSTA LTR MaLR 1 428 0 874 266 89 29 chr5 8916053 8916346 -194169186 - LTR33 LTR ERVL -182 339 16 443 291 53 89 chr5 8917016 8917346 -194168186 + MER21B LTR ERV1 6 326 -279 294 221 57 150 chr5 8917372 8917512 -194168020 + MER21B LTR ERV1 550 676 -187 1105 32 0 0 chr5 8917761 8917887 -194167645 - L1PA5 LINE L1 -1 6153 6028 2287 59 0 53 chr5 8917892 8918196 -194167336 - AluY SINE Alu -23 288 1 449 211 106 33 chr5 8918393 8918573 -194166959 + LTR16A1 LTR ERVL 265 457 0 380 291 162 50 chr5 8920228 8920813 -194164719 + L2 LINE L2 1628 2278 -1036 347 240 24 72 chr5 8921478 8921603 -194163929 - L2 LINE L2 0 3313 3195 659 209 214 15 chr5 8922126 8922322 -194163210 + MER106A DNA MER1_type 2 236 0 1956 145 21 0 chr5 8922342 8922631 -194162901 - AluSx SINE Alu -17 295 1 605 213 25 0 chr5 8924678 8924800 -194160732 - L1ME3A LINE L1 -8 6162 6038 * 13093 17 0 13 chr5 8924799 8927139 -194158393 + L1HS LINE L1 3833 6155 0 246 62 0 0 chr5 8927140 8927172 -194158360 + (A)n Simple_repeat Simple_repeat 1 32 0 318 275 85 17 chr5 8927875 8928116 -194157416 + MLT1L LTR MaLR 248 597 0 1251 235 101 38 chr5 8928688 8929131 -194156401 + MLT1C LTR MaLR 1 466 -1 186 338 127 53 chr5 8930996 8931688 -194153844 + L2 LINE L2 1861 2603 -711 556 258 137 61 chr5 8931946 8932275 -194153257 - MLT1I LTR MaLR -4 405 52 317 351 45 8 chr5 8932406 8932540 -194152992 - MER5A DNA MER1_type -48 141 3 265 211 28 0 chr5 8932877 8932948 -194152584 - L1MA7 LINE L1 -6 6285 6213 1840 153 0 33 chr5 8933153 8933460 -194152072 - AluJb SINE Alu -15 297 1 214 255 20 0 chr5 8934170 8934221 -194151311 + (CAA)n Simple_repeat Simple_repeat 2 53 0 277 224 0 0 chr5 8934237 8934295 -194151237 - MIR SINE MIR -21 241 184 21 57 0 0 chr5 8934867 8934902 -194150630 + AT_rich Low_complexity Low_complexity 1 35 0 1914 178 15 15 chr5 8934974 8935316 -194150216 - MER2 DNA MER2_type -1 343 2 258 240 53 13 chr5 8936264 8936339 -194149193 - L2 LINE L2 -77 3236 3159 684 309 85 32 chr5 8936571 8936946 -194148586 + L2 LINE L2 2447 2841 -473 295 277 70 78 chr5 8937056 8937298 -194148234 + L2 LINE L2 3070 3309 -4 279 274 68 35 chr5 8938954 8939162 -194146370 + L1ME3A LINE L1 5256 5450 -734 241 132 19 19 chr5 8941370 8941423 -194144109 + CT-rich Low_complexity Low_complexity 4 56 0 202 200 25 50 chr5 8941610 8941690 -194143842 + CT-rich Low_complexity Low_complexity 2 79 0 1683 173 62 7 chr5 8942173 8942480 -194143052 + MER58B DNA MER1_type 1 324 -17 1368 113 26 0 chr5 9043038 9043232 -194042300 + THE1B LTR MaLR 133 331 -33 327 191 0 0 chr5 9044164 9044232 -194041300 + (CA)n Simple_repeat Simple_repeat 2 69 0 980 106 0 14 chr5 9044788 9044930 -194040602 - AluSg/x SINE Alu -17 295 156 22 56 0 0 chr5 9045261 9045297 -194040235 + AT_rich Low_complexity Low_complexity 1 36 0 274 361 57 15 chr5 9047731 9047994 -194037538 + L2 LINE L2 2623 2896 -418 340 347 15 10 chr5 9050010 9050209 -194035323 + MIR SINE MIR 63 262 0 2621 65 0 0 chr5 9051771 9052079 -194033453 - AluY SINE Alu -3 308 1 902 260 13 0 chr5 9052084 9052311 -194033221 + L1ME3A LINE L1 5522 5751 -419 810 116 7 87 chr5 9052411 9052549 -194032983 - AluSc SINE Alu -161 148 22 372 310 9 0 chr5 9052646 9052762 -194032770 + L1ME3A LINE L1 6049 6165 -5 642 60 0 0 chr5 9052922 9053005 -194032527 + (TA)n Simple_repeat Simple_repeat 1 83 0 232 244 89 0 chr5 9053174 9053264 -194032268 + L1M4c LINE L1 2382 2479 -3905 667 178 6 57 chr5 9053294 9053451 -194032081 - L1MC3 LINE L1 -875 6910 6762 2627 208 15 4 chr5 9053486 9054021 -194031511 + L1MC3 LINE L1 6994 7534 -251 365 298 67 6 chr5 9054023 9054201 -194031331 + L1MC4a LINE L1 6591 6779 -1029 24 53 0 0 chr5 9054388 9054426 -194031106 + AT_rich Low_complexity Low_complexity 1 38 0 293 308 47 0 chr5 9056334 9056441 -194029091 + L2 LINE L2 3201 3312 -1 219 316 60 8 chr5 9056806 9056932 -194028600 + MIR SINE MIR 11 143 -66 21 0 0 0 chr5 9057560 9057581 -194027951 + AT_rich Low_complexity Low_complexity 1 21 0 443 154 22 0 chr5 9057896 9057987 -194027545 - AluJb SINE Alu 0 312 220 * 720 208 0 0 chr5 9057981 9058101 -194027431 - AluJb SINE Alu -191 121 2 24 0 0 0 chr5 9058115 9058139 -194027393 + AT_rich Low_complexity Low_complexity 1 24 0 1906 149 0 36 chr5 9058169 9058477 -194027055 - AluJb SINE Alu -15 297 1 23 33 0 0 chr5 9059241 9059271 -194026261 + AT_rich Low_complexity Low_complexity 1 30 0 2068 44 52 0 chr5 9060083 9060333 -194025199 - AluY SINE Alu -1 310 48 1538 22 0 16 chr5 9060530 9060715 -194024817 + AluYa5 SINE Alu 120 301 -10 226 237 10 82 chr5 9061084 9061181 -194024351 + MIR SINE MIR 52 141 -121 234 114 45 0 chr5 9061561 9061605 -194023927 - MLT1J2 LTR MaLR -34 416 371 345 318 7 39 chr5 9061795 9061949 -194023583 - MLT1H LTR MaLR -307 242 94 386 256 22 0 chr5 9063733 9063823 -194021709 - MER5A DNA MER1_type -85 104 13 258 336 99 15 chr5 9064364 9064495 -194021037 - L2 LINE L2 -1 3312 3171 28 29 0 0 chr5 9064502 9064537 -194020995 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 9064658 9064691 -194020841 + (CA)n Simple_repeat Simple_repeat 2 34 0 321 68 0 0 chr5 9064691 9064735 -194020797 + (GA)n Simple_repeat Simple_repeat 1 44 0 1439 175 61 61 chr5 9066116 9066510 -194019022 + MLT1C LTR MaLR 1 394 -73 309 261 169 72 chr5 9067195 9067444 -194018088 - L2 LINE L2 -11 3302 3030 328 238 61 62 chr5 9067610 9067800 -194017732 + L1MC4a LINE L1 5748 5939 -182 259 320 10 10 chr5 9068076 9068173 -194017359 - MLT1I LTR MaLR -309 100 4 187 336 133 8 chr5 9070317 9070445 -194015087 + L2 LINE L2 3126 3269 -3 2264 200 90 24 chr5 9071137 9071712 -194013820 - L1MB5 LINE L1 -8 6166 5554 21 36 0 0 chr5 9072785 9072813 -194012719 + AT_rich Low_complexity Low_complexity 1 28 0 655 186 9 0 chr5 9073622 9073853 -194011679 - L1MA9 LINE L1 -22 6290 5962 2331 53 0 86 chr5 9074094 9074432 -194011100 + AluY SINE Alu 1 309 -2 1699 271 52 18 chr5 9075706 9076392 -194009140 - L1MC4 LINE L1 -1 8041 7252 1046 225 166 103 chr5 9076393 9076473 -194009059 - L1MC4 LINE L1 -957 7085 7011 2000 124 3 17 chr5 9076473 9076786 -194008746 - AluSx SINE Alu 0 309 1 1046 225 166 103 chr5 9076786 9077135 -194008397 - L1MC4 LINE L1 -1031 7011 6606 192 40 0 0 chr5 9077135 9077160 -194008372 + (TG)n Simple_repeat Simple_repeat 2 26 0 1046 225 166 103 chr5 9077160 9077318 -194008214 - L1MC4 LINE L1 -1436 6606 6459 214 241 0 35 chr5 9077763 9077792 -194007740 + GA-rich Low_complexity Low_complexity 2 30 -27 1680 164 43 0 chr5 9077792 9078097 -194007435 + L1MA4 LINE L1 5983 6300 0 214 241 0 35 chr5 9078097 9078125 -194007407 + GA-rich Low_complexity Low_complexity 30 57 0 200 276 69 52 chr5 9078493 9078551 -194006981 + L2 LINE L2 3148 3206 -66 232 328 47 16 chr5 9080664 9080792 -194004740 + MIR SINE MIR 129 260 -2 967 282 103 3 chr5 9081145 9081532 -194004000 + LTR16A LTR ERVL 25 450 0 230 264 99 33 chr5 9081532 9081623 -194003909 + MIR SINE MIR 81 177 -85 638 199 0 73 chr5 9081896 9082032 -194003500 - FRAM SINE Alu -43 133 8 389 280 143 32 chr5 9082255 9082444 -194003088 + L2 LINE L2 2882 3091 -181 1172 231 46 53 chr5 9082911 9083322 -194002210 - MLT1C LTR MaLR -1 466 59 189 0 0 0 chr5 9084193 9084214 -194001318 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 251 238 50 38 chr5 9084422 9084502 -194001030 - MIR SINE MIR 0 262 182 644 143 6 34 chr5 9084513 9084688 -194000844 + (TA)n Simple_repeat Simple_repeat 1 170 0 560 309 133 17 chr5 9084802 9085345 -194000187 - L1M4 LINE L1 -2752 3394 2789 1969 114 0 7 chr5 9086592 9086865 -193998667 - AluSq SINE Alu -8 305 35 182 391 0 17 chr5 9087246 9087361 -193998171 + L3b LINE CR1 1119 1231 -352 678 332 26 142 chr5 9088261 9088487 -193997045 + L1PA7 LINE L1 5867 6066 -88 184 186 0 23 chr5 9089656 9089699 -193995833 + L2 LINE L2 3186 3227 -86 486 319 86 9 chr5 9089814 9090046 -193995486 + MIR SINE MIR 10 259 -3 2377 113 3 0 chr5 9090438 9090749 -193994783 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 9090939 9090960 -193994572 + AT_rich Low_complexity Low_complexity 1 21 0 567 272 62 5 chr5 9091242 9091437 -193994095 - MER58A DNA MER1_type 0 224 19 2036 75 30 0 chr5 9091618 9091885 -193993647 + L1PA12 LINE L1 5845 6119 -49 203 396 43 40 chr5 9093017 9093391 -193992141 + L3 LINE CR1 403 777 -800 302 280 167 18 chr5 9093585 9093753 -193991779 - MIR SINE MIR -42 220 28 294 239 14 0 chr5 9094034 9094105 -193991427 + MIR3 SINE MIR 128 199 -9 1084 184 34 5 chr5 9094250 9094457 -193991075 - MLT2C1 LTR ERVL -184 213 1 740 239 54 47 chr5 9094458 9094758 -193990774 - ERVL LTR ERVL -2 5755 5380 26 74 0 0 chr5 9094894 9094948 -193990584 + AT_rich Low_complexity Low_complexity 1 54 0 312 73 455 0 chr5 9095165 9095220 -193990312 - MADE1 DNA Mariner 0 80 1 2416 71 0 16 chr5 9095311 9095619 -193989913 + AluY SINE Alu 1 303 -8 1079 231 30 24 chr5 9095807 9096256 -193989276 - MLT1D LTR MaLR -1 504 4 237 116 47 23 chr5 9096257 9096300 -193989232 - MLT1D LTR MaLR -453 52 9 376 290 75 37 chr5 9096597 9096811 -193988721 - MLT1E LTR MaLR -367 226 5 363 318 99 10 chr5 9097907 9098099 -193987433 - MIR SINE MIR -9 253 45 284 315 56 49 chr5 9098415 9098577 -193986955 + L2 LINE L2 2985 3147 -125 229 262 29 10 chr5 9099877 9099980 -193985552 + (TA)n Simple_repeat Simple_repeat 2 106 0 570 256 73 55 chr5 9100721 9101010 -193984522 - MLT1I LTR MaLR -2 407 114 184 318 78 61 chr5 9102439 9102684 -193982848 + L2 LINE L2 2864 3112 -160 228 135 0 0 chr5 9102684 9102721 -193982811 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 284 351 38 0 chr5 9102971 9103102 -193982430 - MIR SINE MIR -71 191 56 299 317 10 0 chr5 9104840 9104944 -193980588 + L1ME2 LINE L1 6038 6142 -22 243 158 0 0 chr5 9106904 9106942 -193978590 - L2 LINE L2 0 3272 3235 273 29 0 0 chr5 9107502 9107536 -193977996 + (CA)n Simple_repeat Simple_repeat 1 34 0 286 204 0 0 chr5 9107599 9107610 -193977922 + MER3 DNA MER1_type 37 47 -162 384 244 57 16 chr5 9107610 9107733 -193977799 - MER3 DNA MER1_type 0 209 82 254 281 21 21 chr5 9107754 9107850 -193977682 - L1MC/D LINE L1 -2031 5777 5682 2039 142 31 0 chr5 9108576 9108900 -193976632 - THE1B LTR MaLR -30 334 1 215 353 147 0 chr5 9109399 9109515 -193976017 - L2 LINE L2 -26 3246 3114 21 36 0 0 chr5 9110977 9111005 -193974527 + AT_rich Low_complexity Low_complexity 1 28 0 260 314 20 20 chr5 9111281 9111434 -193974098 - L1MC/D LINE L1 -443 5678 5526 288 250 0 54 chr5 9111810 9111902 -193973630 - L2 LINE L2 -1361 1953 1867 740 294 167 27 chr5 9111976 9112414 -193973118 - L2 LINE L2 -1462 1852 1354 4481 132 28 74 chr5 9113647 9114482 -193971050 - L1MA4 LINE L1 -8 6292 5497 1282 144 22 51 chr5 9114477 9114831 -193970701 + L1M1 LINE L1 5108 5458 -743 3352 152 39 33 chr5 9114987 9115160 -193970372 + L1MA2 LINE L1 4993 5163 -1142 216 0 0 0 chr5 9115160 9115184 -193970348 + (CA)n Simple_repeat Simple_repeat 1 24 0 3352 152 39 33 chr5 9115184 9115394 -193970138 + L1MA2 LINE L1 5163 5370 -935 2345 90 0 3 chr5 9115394 9115705 -193969827 + AluY SINE Alu 1 310 -1 3352 152 39 33 chr5 9115705 9116181 -193969351 + L1MA2 LINE L1 5370 5858 -447 5734 99 17 1 chr5 9116189 9117060 -193968472 - L1PA13 LINE L1 -1 6162 5278 2480 139 13 13 chr5 9117060 9117511 -193968021 + L1MA2 LINE L1 5853 6304 0 22 35 0 0 chr5 9117959 9117988 -193967544 + AT_rich Low_complexity Low_complexity 1 29 0 413 297 101 9 chr5 9121060 9121279 -193964253 + L2 LINE L2 2301 2539 -775 2174 118 0 0 chr5 9121281 9121577 -193963955 + AluSq SINE Alu 2 297 -16 377 285 50 11 chr5 9122002 9122181 -193963351 + LTR33 LTR ERVL 334 519 -2 1498 266 136 51 chr5 9122774 9123375 -193962157 + L1MCa LINE L1 59 607 -6334 2340 175 24 0 chr5 9123375 9123797 -193961735 + MSTB1 LTR MaLR 1 432 0 1498 266 136 51 chr5 9123797 9125206 -193960326 + L1MCa LINE L1 607 2200 -4741 1422 254 84 28 chr5 9125247 9126280 -193959252 + L1MCa LINE L1 2479 3538 -3403 216 97 0 0 chr5 9126296 9126327 -193959205 + (CA)n Simple_repeat Simple_repeat 2 32 0 296 178 40 53 chr5 9126344 9126496 -193959036 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 180 77 0 0 chr5 9127080 9127106 -193958426 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 352 277 132 76 chr5 9127345 9127846 -193957686 + L1ME4a LINE L1 5593 6121 0 376 262 56 0 chr5 9129739 9129846 -193955686 + MIR SINE MIR 2 114 -148 446 167 0 0 chr5 9129864 9129942 -193955590 - Tigger5 DNA MER2_type 0 2323 2246 335 213 0 27 chr5 9129991 9130066 -193955466 - Tigger5 DNA MER2_type -2231 92 20 651 291 36 4 chr5 9130375 9130626 -193954906 + MIR SINE MIR 3 261 -1 21 0 0 0 chr5 9130651 9130672 -193954860 + AT_rich Low_complexity Low_complexity 1 21 0 350 336 69 42 chr5 9131561 9131749 -193953783 - L2 LINE L2 -763 2551 2353 2077 122 84 29 chr5 9131749 9132092 -193953440 + THE1B LTR MaLR 1 362 -2 350 336 69 42 chr5 9132092 9132165 -193953367 - L2 LINE L2 -961 2353 2283 1134 258 56 12 chr5 9132373 9132783 -193952749 - MLT1H1 LTR MaLR -1 554 134 217 242 91 0 chr5 9132915 9132981 -193952551 + L2 LINE L2 2717 2788 -526 186 43 0 0 chr5 9133312 9133335 -193952197 + (T)n Simple_repeat Simple_repeat 1 23 0 192 323 15 0 chr5 9133475 9133540 -193951992 + MIR3 SINE MIR 101 166 -42 226 303 86 40 chr5 9133661 9133813 -193951719 + L3 LINE CR1 704 862 -715 234 285 102 54 chr5 9135615 9135801 -193949731 + MLT1J LTR MaLR 23 217 -294 954 192 0 0 chr5 9136567 9136718 -193948814 + AluJb SINE Alu 143 293 -19 2352 90 3 0 chr5 9136868 9137178 -193948354 + AluY SINE Alu 1 311 0 676 218 262 17 chr5 9139310 9139719 -193945813 + MLT1H LTR MaLR 39 547 -2 773 225 11 16 chr5 9139830 9140017 -193945515 - MER5A DNA MER1_type -3 186 1 23 54 0 0 chr5 9140794 9140831 -193944701 + AT_rich Low_complexity Low_complexity 1 37 0 47 19 0 0 chr5 9140948 9141002 -193944530 + AT_rich Low_complexity Low_complexity 1 54 0 28 0 0 0 chr5 9141127 9141155 -193944377 + AT_rich Low_complexity Low_complexity 1 28 0 386 165 65 24 chr5 9141157 9141327 -193944205 + (TA)n Simple_repeat Simple_repeat 2 178 0 328 281 87 58 chr5 9141870 9142112 -193943420 + L1ME LINE L1 5537 5785 -336 1285 184 83 0 chr5 9142517 9142792 -193942740 - Tigger1 DNA MER2_type -3 2415 2118 3938 142 14 7 chr5 9142792 9143498 -193942034 + MER50 LTR ERV1 1 711 -23 311 83 0 0 chr5 9143505 9143553 -193941979 - Tigger1 DNA MER2_type -303 2115 2068 5413 146 10 24 chr5 9143553 9144746 -193940786 + L1PB3 LINE L1 4853 6025 -129 2283 109 3 6 chr5 9144746 9145058 -193940474 + AluSx SINE Alu 1 311 -1 5413 146 10 24 chr5 9145058 9145187 -193940345 + L1PB3 LINE L1 6025 6154 0 11694 134 25 21 chr5 9145210 9147279 -193938253 - Tigger1 DNA MER2_type -340 2078 2 5308 81 28 4 chr5 9147730 9148479 -193937053 + L1PA11 LINE L1 5408 6174 0 426 20 0 0 chr5 9150367 9150418 -193935114 + (TATG)n Simple_repeat Simple_repeat 2 52 0 269 111 56 0 chr5 9150421 9150475 -193935057 - FLAM SINE Alu -16 117 61 24 32 0 0 chr5 9150588 9150619 -193934913 + AT_rich Low_complexity Low_complexity 1 31 0 449 299 15 45 chr5 9150724 9151139 -193934393 + L1MC4a LINE L1 3914 4326 -1820 355 318 74 37 chr5 9151229 9151528 -193934004 + L1MC4a LINE L1 4400 4709 -1437 772 265 133 27 chr5 9151827 9152512 -193933020 + L1MC4a LINE L1 5128 5398 -748 2418 55 3 7 chr5 9152536 9152846 -193932686 + AluY SINE Alu 3 311 0 2546 43 40 0 chr5 9153275 9153574 -193931958 - AluY SINE Alu 0 311 1 307 362 50 14 chr5 9153674 9153815 -193931717 + L1MC4a LINE L1 6543 6688 -1120 271 301 41 10 chr5 9153827 9154023 -193931509 + L1MC4 LINE L1 6847 7048 -994 433 286 26 87 chr5 9154490 9154895 -193930637 + L1MC5 LINE L1 7297 7676 -285 1549 213 20 25 chr5 9154895 9155294 -193930238 - MLT2C1 LTR ERVL 0 397 1 433 286 26 87 chr5 9155294 9155315 -193930217 + L1MC5 LINE L1 7676 7697 -264 350 228 13 0 chr5 9155331 9155410 -193930122 - MER63 DNA MER1_type -87 749 44 23 54 0 0 chr5 9155510 9155547 -193929985 + AT_rich Low_complexity Low_complexity 1 37 0 265 296 14 0 chr5 9155967 9156038 -193929494 + MIR SINE MIR 105 176 -86 297 0 0 0 chr5 9157382 9157415 -193928117 + (TG)n Simple_repeat Simple_repeat 2 34 0 2152 124 26 3 chr5 9157427 9157775 -193927757 + THE1B LTR MaLR 9 364 0 354 318 127 5 chr5 9158152 9158341 -193927191 - MIR SINE MIR -14 248 37 349 287 7 60 chr5 9158507 9158657 -193926875 + L2 LINE L2 3118 3259 -54 336 291 112 22 chr5 9159301 9159524 -193926008 - MIR SINE MIR -3 259 17 809 229 71 0 chr5 9160643 9160853 -193924679 + MER82 DNA MER2_type 3 227 -426 380 238 0 0 chr5 9160870 9160950 -193924582 + MER82 DNA MER2_type 573 652 -1 269 272 22 29 chr5 9162591 9162727 -193922805 - L1M4 LINE L1 -348 5830 5696 236 229 0 0 chr5 9163178 9163239 -193922293 - L1M4 LINE L1 -1318 4828 4768 23 0 0 0 chr5 9163609 9163632 -193921900 + AT_rich Low_complexity Low_complexity 1 23 0 570 207 9 0 chr5 9164027 9164170 -193921362 - L1MA10 LINE L1 -35 6299 5996 281 333 8 0 chr5 9164156 9164282 -193921250 - L1ME LINE L1 -644 5591 5465 * 1407 227 120 74 chr5 9164392 9165111 -193920421 - LTR1B LTR ERV1 -74 752 1 2611 237 41 69 chr5 9165112 9166183 -193919349 - L1ME LINE L1 -743 5472 4432 392 287 45 38 chr5 9166211 9166368 -193919164 - L1ME LINE L1 -2221 3994 3837 276 125 0 42 chr5 9166372 9166444 -193919088 + (TA)n Simple_repeat Simple_repeat 1 69 0 1967 296 78 8 chr5 9166491 9167742 -193917790 - L1ME LINE L1 -2400 3815 2460 1220 280 40 23 chr5 9167758 9167905 -193917627 - L1ME LINE L1 -5863 533 390 216 0 0 0 chr5 9167905 9167929 -193917603 + (TC)n Simple_repeat Simple_repeat 2 25 0 1220 280 40 23 chr5 9167929 9168252 -193917280 - L1ME LINE L1 -6006 390 55 731 239 23 11 chr5 9168870 9169046 -193916486 + MER45A DNA AcHobo 1 178 0 1550 197 89 53 chr5 9169166 9169316 -193916216 + MLT1C LTR MaLR 1 144 -323 2463 108 50 14 chr5 9169316 9169678 -193915854 + THE1C LTR MaLR 1 375 0 1550 197 89 53 chr5 9169678 9169978 -193915554 + MLT1C LTR MaLR 144 467 0 1811 190 39 33 chr5 9170309 9170672 -193914860 + MLT1A1 LTR MaLR 1 365 0 638 306 54 0 chr5 9172504 9172690 -193912842 + MIR SINE MIR 34 229 -33 197 365 12 12 chr5 9172761 9172846 -193912686 - L2 LINE L2 0 3313 3229 521 226 17 0 chr5 9172872 9172987 -193912545 - L1PB4 LINE L1 -2 6154 6038 2906 82 8 11 chr5 9173248 9173613 -193911919 - THE1B LTR MaLR 0 364 1 862 156 0 30 chr5 9174608 9174743 -193910789 + FLAM_C SINE Alu 1 131 -2 246 32 0 0 chr5 9174807 9174838 -193910694 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 297 53 0 0 chr5 9175091 9175129 -193910403 - MADE1 DNA Mariner -42 38 1 1588 173 98 57 chr5 9175312 9175751 -193909781 + MLT1C LTR MaLR 2 458 -9 734 189 128 36 chr5 9176721 9176917 -193908615 - MER20 DNA MER1_type -3 216 3 257 266 266 23 chr5 9176925 9177098 -193908434 + MIR SINE MIR 15 229 -33 1093 279 77 68 chr5 9177199 9177732 -193907800 + MER77 LTR ERV1 62 599 -6 2385 98 3 0 chr5 9177997 9178302 -193907230 + AluSg SINE Alu 1 306 -4 203 303 0 0 chr5 9178948 9179014 -193906518 + A-rich Low_complexity Low_complexity 3 68 0 222 295 121 54 chr5 9179072 9179296 -193906236 - L2 LINE L2 -46 3267 3029 231 276 48 35 chr5 9179593 9179738 -193905794 + L1M4 LINE L1 4288 4434 -1712 234 320 91 28 chr5 9180217 9180470 -193905062 - L1M4 LINE L1 -1756 4390 4122 299 333 42 17 chr5 9180666 9180786 -193904746 - MIR3 SINE MIR -21 187 65 903 162 61 18 chr5 9181701 9181929 -193903603 + L1MA7 LINE L1 6032 6269 -22 315 143 26 13 chr5 9181958 9182035 -193903497 + L1MA7 LINE L1 6213 6290 -1 2456 52 3 16 chr5 9183352 9183661 -193901871 + AluY SINE Alu 1 305 -6 392 243 84 99 chr5 9184009 9184211 -193901321 - MIR SINE MIR -44 218 20 2702 17 0 0 chr5 9184858 9185156 -193900376 - AluYa5 SINE Alu -13 298 1 480 207 178 65 chr5 9185333 9185502 -193900030 - ORSL DNA AcHobo -7 268 81 200 227 0 0 chr5 9186577 9186621 -193898911 + T-rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 9186681 9186707 -193898825 + AT_rich Low_complexity Low_complexity 1 26 0 455 328 51 38 chr5 9187065 9187537 -193897995 + L1M4 LINE L1 2434 2911 -3235 180 0 0 0 chr5 9187542 9187562 -193897970 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4908 81 11 5 chr5 9187567 9188231 -193897301 - L1PA13 LINE L1 -20 6143 5476 2107 116 7 0 chr5 9188282 9188566 -193896966 + AluSx SINE Alu 1 286 -26 747 266 75 50 chr5 9188724 9188780 -193896752 + MLT2E LTR ERVL 43 96 -532 2113 115 3 16 chr5 9188780 9189085 -193896447 + AluSc SINE Alu 1 301 -8 747 266 75 50 chr5 9189085 9189347 -193896185 + MLT2E LTR ERVL 96 369 -259 268 103 0 0 chr5 9189388 9189427 -193896105 + THE1C LTR MaLR 1 39 -389 * 1011 133 40 96 chr5 9189403 9189652 -193895880 + THE1C LTR MaLR 141 375 0 413 232 36 58 chr5 9189735 9189873 -193895659 + ERVL LTR ERVL 3314 3448 -2316 1774 167 3 7 chr5 9190790 9191089 -193894443 + AluJb SINE Alu 1 298 -14 343 275 54 83 chr5 9191191 9191703 -193893829 + MLT1H LTR MaLR 15 549 0 1434 271 125 17 chr5 9191751 9192286 -193893246 + MLT1G1 LTR MaLR 3 595 0 403 293 55 85 chr5 9192286 9192592 -193892940 + MLT1I LTR MaLR 109 405 -4 482 270 182 35 chr5 9192598 9192916 -193892616 + L1M4 LINE L1 3122 3486 -2660 351 0 0 0 chr5 9192973 9193012 -193892520 + (TG)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 9193646 9193678 -193891854 + AT_rich Low_complexity Low_complexity 1 32 0 180 111 0 0 chr5 9193807 9193834 -193891698 + (CA)n Simple_repeat Simple_repeat 2 28 0 348 231 0 0 chr5 9195595 9195660 -193889872 + MIR SINE MIR 81 145 -63 671 248 171 5 chr5 9195738 9195960 -193889572 - MIR SINE MIR -3 259 1 183 220 0 0 chr5 9196977 9197027 -193888505 + A-rich Low_complexity Low_complexity 1 50 0 211 333 71 0 chr5 9197072 9197171 -193888361 + L2 LINE L2 3187 3292 -21 180 241 37 56 chr5 9198316 9198370 -193887162 + MIR SINE MIR 71 123 -85 246 315 48 67 chr5 9198655 9198820 -193886712 + L3b LINE CR1 1185 1346 -237 21 0 0 0 chr5 9199233 9199254 -193886278 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr5 9199476 9199504 -193886028 + (A)n Simple_repeat Simple_repeat 1 28 0 32 57 0 0 chr5 9200667 9200720 -193884812 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr5 9201666 9201701 -193883831 + GC_rich Low_complexity Low_complexity 1 35 0 482 259 0 0 chr5 9205144 9205252 -193880280 + MER45A DNA AcHobo 71 178 0 245 346 53 45 chr5 9206787 9206920 -193878612 + MIR3 SINE MIR 49 182 -26 29 0 0 0 chr5 9206999 9207028 -193878504 + AT_rich Low_complexity Low_complexity 1 29 0 408 315 31 8 chr5 9207182 9207309 -193878223 + L2 LINE L2 3184 3313 0 2224 94 3 13 chr5 9207827 9208125 -193877407 + AluSg SINE Alu 1 295 -15 21 89 0 0 chr5 9209817 9209873 -193875659 + AT_rich Low_complexity Low_complexity 1 56 0 1602 181 0 11 chr5 9210509 9210786 -193874746 + AluJb SINE Alu 1 274 -38 2139 129 40 35 chr5 9211775 9212148 -193873384 + THE1C LTR MaLR 1 375 0 268 188 27 20 chr5 9212230 9212379 -193873153 + (TA)n Simple_repeat Simple_repeat 1 150 0 190 106 43 0 chr5 9212437 9212484 -193873048 + (TA)n Simple_repeat Simple_repeat 1 49 0 189 49 24 49 chr5 9212519 9212560 -193872972 + (TTA)n Simple_repeat Simple_repeat 2 41 0 33 0 0 0 chr5 9212665 9212698 -193872834 + AT_rich Low_complexity Low_complexity 1 33 0 415 238 113 61 chr5 9213894 9214125 -193871407 - MLT1L LTR MaLR -365 250 8 21 0 0 0 chr5 9215572 9215593 -193869939 + AT_rich Low_complexity Low_complexity 1 21 0 713 246 108 38 chr5 9215725 9215912 -193869620 + L1ME2 LINE L1 1874 2046 -4675 1858 160 7 0 chr5 9215912 9216212 -193869320 + AluSx SINE Alu 6 307 -5 713 246 108 38 chr5 9216212 9216497 -193869035 + L1ME2 LINE L1 2046 2429 -4292 442 295 80 20 chr5 9216615 9217026 -193868506 + L1ME2 LINE L1 2401 2834 -3706 2053 247 104 15 chr5 9217031 9218085 -193867447 + L1ME2 LINE L1 5373 6518 -40 22 56 0 0 chr5 9218211 9218247 -193867285 + AT_rich Low_complexity Low_complexity 1 36 0 639 237 0 0 chr5 9218430 9218561 -193866971 + FLAM_C SINE Alu 1 131 -12 194 335 57 10 chr5 9221208 9221321 -193864211 + MIR SINE MIR 6 126 -82 230 79 0 26 chr5 9221669 9221707 -193863825 + (GAAA)n Simple_repeat Simple_repeat 3 39 0 2527 43 7 7 chr5 9222576 9222879 -193862653 + AluY SINE Alu 1 303 -8 24 53 0 0 chr5 9222969 9223007 -193862525 + AT_rich Low_complexity Low_complexity 1 38 0 1975 89 63 7 chr5 9224220 9224489 -193861043 - AluSc SINE Alu -25 284 1 273 135 0 0 chr5 9224807 9224859 -193860673 + (TGG)n Simple_repeat Simple_repeat 1 52 0 689 51 31 0 chr5 9224959 9225057 -193860475 - THE1A-int LTR MaLR -1479 101 1 2291 128 14 8 chr5 9225057 9225410 -193860122 - THE1A LTR MaLR 0 355 1 245 155 12 119 chr5 9226137 9226221 -193859311 - L1MB7 LINE L1 -171 6007 5933 235 94 62 62 chr5 9226528 9226592 -193858940 - L1MA9 LINE L1 -10 6302 6239 302 183 0 14 chr5 9226609 9226680 -193858852 - L1MA9 LINE L1 -153 6159 6090 * 314 161 46 146 chr5 9226673 9226839 -193858693 + L1P4 LINE L1 5711 5860 -314 215 247 146 34 chr5 9228033 9228122 -193857410 + MIR SINE MIR 157 255 -7 2157 115 0 7 chr5 9228642 9228963 -193856569 - AluSx SINE Alu 0 319 1 856 278 16 20 chr5 9229039 9229291 -193856241 - MIR SINE MIR 0 262 12 205 220 121 33 chr5 9229818 9229909 -193855623 - MIR SINE MIR -32 230 132 2350 81 0 0 chr5 9230209 9230506 -193855026 + AluY SINE Alu 3 299 -12 1708 219 56 16 chr5 9230597 9231045 -193854487 - MLT1C LTR MaLR -1 466 1 2228 90 11 74 chr5 9231150 9231527 -193854005 - THE1A LTR MaLR 0 355 3 3348 78 36 0 chr5 9231529 9232002 -193853530 - THE1A-int LTR MaLR 0 1580 1091 2647 188 39 26 chr5 9232111 9232730 -193852802 - L1MB8 LINE L1 -211 5967 5329 1947 144 32 32 chr5 9232730 9233105 -193852427 + THE1C LTR MaLR 1 375 0 2647 188 39 26 chr5 9233105 9233138 -193852394 - L1MB8 LINE L1 -849 5329 5298 1071 268 17 0 chr5 9234828 9235119 -193850413 - LTR16A LTR ERVL 0 450 155 189 281 74 44 chr5 9235218 9235333 -193850199 + MIR SINE MIR 63 183 -69 1036 190 156 50 chr5 9235540 9235898 -193849634 + MSTD LTR MaLR 1 396 0 1549 206 125 20 chr5 9235974 9236431 -193849101 - MLT1D LTR MaLR 0 505 1 182 286 0 0 chr5 9236472 9236507 -193849025 + L2 LINE L2 3144 3178 -94 21 0 0 0 chr5 9237079 9237100 -193848432 + AT_rich Low_complexity Low_complexity 1 21 0 1519 233 69 2 chr5 9238002 9238409 -193847123 + MLT2B1 LTR ERVL 31 464 -56 489 143 44 15 chr5 9238410 9238753 -193846779 + (TCTA)n Simple_repeat Simple_repeat 1 353 0 21 0 0 0 chr5 9239542 9239563 -193845969 + AT_rich Low_complexity Low_complexity 1 21 0 15498 129 19 32 chr5 9240311 9243075 -193842457 - Tigger4(Zombi) DNA MER2_type -5 2726 1 22 35 0 0 chr5 9243106 9243135 -193842397 + AT_rich Low_complexity Low_complexity 1 29 0 190 368 11 0 chr5 9244183 9244270 -193841262 + L2 LINE L2 3221 3308 -5 181 362 66 26 chr5 9244977 9245129 -193840403 + L3 LINE CR1 1323 1480 -97 2173 151 89 5 chr5 9245158 9245549 -193839983 - MSTB LTR MaLR 0 426 3 1971 208 27 0 chr5 9246834 9247309 -193838223 - Charlie1 DNA MER1_type -67 2694 2207 1229 246 59 60 chr5 9247492 9247632 -193837900 + L1ME2 LINE L1 4602 4741 -1405 2345 75 0 16 chr5 9247632 9247940 -193837592 - AluY SINE Alu 0 311 9 1229 246 59 60 chr5 9247940 9248544 -193836988 + L1ME2 LINE L1 4741 5345 -801 1604 108 62 22 chr5 9248544 9248885 -193836647 - MER4A LTR ERV1 0 664 252 855 121 0 13 chr5 9248911 9249060 -193836472 - MER4A LTR ERV1 -517 147 1 2754 238 36 13 chr5 9249060 9249855 -193835677 + L1ME2 LINE L1 5342 6155 -9 218 193 35 35 chr5 9251273 9251330 -193834202 + MIR SINE MIR 105 161 -101 424 241 40 125 chr5 9251782 9252134 -193833398 - MLT1K LTR MaLR -116 472 151 980 156 92 29 chr5 9252284 9252522 -193833010 - MLT1D LTR MaLR 0 505 253 890 193 23 6 chr5 9254647 9254818 -193830714 + MER2 DNA MER2_type 1 174 -171 635 183 23 11 chr5 9254862 9255037 -193830495 + CT-rich Low_complexity Low_complexity 3 179 0 280 87 0 0 chr5 9256514 9256560 -193828972 - MER5C DNA MER1_type -46 278 233 372 291 51 17 chr5 9256586 9256703 -193828829 - MER5C DNA MER1_type -200 124 4 2599 193 16 10 chr5 9256807 9256892 -193828640 + L1MC1 LINE L1 4630 4713 -1620 2093 144 0 7 chr5 9256892 9257197 -193828335 + AluSc SINE Alu 1 303 -6 2599 193 16 10 chr5 9257197 9258133 -193827399 + L1MC1 LINE L1 4713 5656 -677 3522 116 10 48 chr5 9258133 9258756 -193826776 + LTR14B LTR ERVK 10 608 0 2123 139 15 22 chr5 9258756 9259160 -193826372 + L1MC1 LINE L1 5657 6057 -276 1380 195 24 7 chr5 9259189 9259476 -193826056 + L1MC1 LINE L1 6036 6327 -6 231 125 0 0 chr5 9260330 9260370 -193825162 + (TC)n Simple_repeat Simple_repeat 1 40 0 1730 185 3 10 chr5 9261105 9261403 -193824129 - AluJb SINE Alu -16 296 1 268 250 9 9 chr5 9261510 9261618 -193823914 + (TATATG)n Simple_repeat Simple_repeat 5 112 0 3021 147 30 63 chr5 9261640 9262273 -193823259 - LTR9 LTR ERV1 0 612 1 4706 205 30 29 chr5 9262411 9262676 -193822856 + L1MD2 LINE L1 4795 5058 -1301 207 0 0 0 chr5 9262676 9262699 -193822833 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4706 205 30 29 chr5 9262699 9263997 -193821535 + L1MD2 LINE L1 5058 6358 -1 24 0 0 0 chr5 9264527 9264551 -193820981 + AT_rich Low_complexity Low_complexity 1 24 0 800 131 5 5 chr5 9365480 9365668 -193719864 + HSMAR2 DNA Mariner 918 1208 -94 1286 155 14 9 chr5 9365668 9365881 -193719651 + AluJo SINE Alu 75 288 -24 579 115 10 0 chr5 9365888 9365992 -193719540 + HSMAR2 DNA Mariner 1197 1301 -1 343 245 11 0 chr5 9365999 9366093 -193719439 + MIR SINE MIR 168 262 0 264 221 176 0 chr5 9366381 9366449 -193719083 + MIR SINE MIR 68 147 -115 578 270 0 0 chr5 9366496 9366607 -193718925 + FLAM_A SINE Alu 2 112 -30 231 196 33 87 chr5 9366815 9366907 -193718625 - MLT2E LTR ERVL 0 628 583 1206 173 16 8 chr5 9367907 9368150 -193717382 + L1MA8 LINE L1 5813 6057 -234 510 266 56 0 chr5 9370070 9370213 -193715319 - MIR SINE MIR -107 155 5 215 324 88 29 chr5 9370926 9371062 -193714470 + MIR3 SINE MIR 34 177 -31 317 217 58 132 chr5 9371070 9371365 -193714167 - L1MC4 LINE L1 -7 8035 7763 720 40 40 10 chr5 9371394 9371494 -193714038 + MER11A LTR ERVK 1150 1252 -14 1397 276 50 32 chr5 9371494 9372189 -193713343 - L1MC4 LINE L1 -296 7746 7039 597 191 5 79 chr5 9372438 9372577 -193712955 - L1PA4 LINE L1 -429 5876 5753 2178 27 0 0 chr5 9372577 9372834 -193712698 + L1PA4 LINE L1 5895 6151 -4 597 191 5 79 chr5 9372834 9372883 -193712649 - L1MA3 LINE L1 -552 5753 5702 458 222 0 8 chr5 9374368 9374485 -193711047 + (CATATA)n Simple_repeat Simple_repeat 3 118 0 1511 97 4 26 chr5 9374513 9374741 -193710791 - L1PA7 LINE L1 -2 6152 5930 746 175 138 3 chr5 9374878 9375059 -193710473 - MLT1J LTR MaLR -46 459 228 21 0 0 0 chr5 9375895 9375916 -193709616 + AT_rich Low_complexity Low_complexity 1 21 0 40122 39 24 2 chr5 9375939 9381958 -193703574 - L1PA3 LINE L1 0 6155 2 192 158 0 0 chr5 9383246 9383284 -193702248 + A-rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 9383425 9383453 -193702079 + AT_rich Low_complexity Low_complexity 1 28 0 479 323 108 53 chr5 9383976 9384391 -193701141 - L1MC4a LINE L1 -1980 5828 5391 267 206 0 14 chr5 9384410 9384483 -193701049 - L1MC4a LINE L1 -821 5345 5274 2192 121 3 0 chr5 9384755 9385062 -193700470 - AluSq SINE Alu -5 308 1 1082 221 103 29 chr5 9385375 9385723 -193699809 + MLT1A2 LTR MaLR 1 467 0 240 326 20 31 chr5 9385752 9385850 -193699682 + L3b LINE CR1 1328 1424 -159 1770 181 79 65 chr5 9387817 9388242 -193697290 - MER67D LTR ERV1 0 514 79 2242 119 48 20 chr5 9388242 9388596 -193696936 - THE1B LTR MaLR 0 364 1 1770 181 79 65 chr5 9388596 9388677 -193696855 - MER67D LTR ERV1 -435 79 1 833 241 20 24 chr5 9389697 9389950 -193695582 - MLT1J LTR MaLR -259 252 1 342 206 0 72 chr5 9390026 9390123 -193695409 + L1MC4 LINE L1 6614 6703 -1339 229 85 0 43 chr5 9390128 9390175 -193695357 + (TA)n Simple_repeat Simple_repeat 1 45 0 243 0 0 0 chr5 9390175 9390202 -193695330 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 205 26 96 chr5 9390325 9390481 -193695051 - MIR SINE MIR -2 260 116 391 164 273 0 chr5 9391696 9391806 -193693726 - MER67D LTR ERV1 -5 509 370 243 0 0 0 chr5 9391808 9391835 -193693697 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2177 19 8 0 chr5 9391865 9392124 -193693408 - L1PA2 LINE L1 0 6155 5895 287 28 0 0 chr5 9392124 9392160 -193693372 + L1P1 LINE L1 5738 5773 -382 5238 129 32 14 chr5 9392490 9393750 -193691782 + L1PA16 LINE L1 4877 6162 -4 233 263 92 26 chr5 9393853 9393929 -193691603 - MIR SINE MIR -118 144 64 1148 215 64 82 chr5 9393963 9394429 -193691103 + MLT1C LTR MaLR 3 460 -7 286 256 12 12 chr5 9394680 9394762 -193690770 - L1ME3A LINE L1 -258 5912 5831 325 273 56 39 chr5 9394788 9395074 -193690458 - L1ME3A LINE L1 -1445 4701 4411 1059 196 63 72 chr5 9395074 9395421 -193690111 + MER2 DNA MER2_type 1 344 0 615 273 76 52 chr5 9395763 9396019 -193689513 - L1M4 LINE L1 -1465 4681 4433 1078 194 64 67 chr5 9396019 9396364 -193689168 + MER2 DNA MER2_type 1 344 0 615 273 76 52 chr5 9396364 9396984 -193688548 - L1M4 LINE L1 -1713 4433 3784 406 326 0 20 chr5 9397707 9397903 -193687629 + L1ME LINE L1 5512 5703 -418 545 176 104 40 chr5 9397969 9398094 -193687438 - MLT1H LTR MaLR -15 534 402 619 230 158 10 chr5 9398136 9398345 -193687187 - MLT1H LTR MaLR -231 318 79 618 167 0 0 chr5 9398490 9398610 -193686922 + L1MA7 LINE L1 6172 6291 0 185 0 40 0 chr5 9399438 9399463 -193686069 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1180 152 5 10 chr5 9399469 9399673 -193685859 - MLT1A1 LTR MaLR -162 203 1 796 282 173 19 chr5 9399683 9400006 -193685526 - L2 LINE L2 -784 2530 2158 277 297 40 0 chr5 9400025 9400126 -193685406 + L1M4 LINE L1 4508 4612 -1534 4436 123 3 1 chr5 9400165 9400821 -193684711 + L1PA15 LINE L1 5496 6152 -13 291 191 0 0 chr5 9402672 9402735 -193682797 + (CA)n Simple_repeat Simple_repeat 2 64 0 539 228 127 6 chr5 9402910 9403068 -193682464 + L1PB4 LINE L1 5890 6066 -90 316 212 0 0 chr5 9403096 9403162 -193682370 + L1PB4 LINE L1 5998 6063 -93 321 217 0 0 chr5 9403193 9403262 -193682270 + L1PB4 LINE L1 5998 6066 -90 782 188 19 19 chr5 9403288 9403448 -193682084 + L1PB4 LINE L1 5996 6155 -1 2306 157 14 5 chr5 9403743 9404157 -193681375 + L1MB1 LINE L1 5740 6157 -11 761 64 27 0 chr5 9404159 9404269 -193681263 + (CAATA)n Simple_repeat Simple_repeat 1 113 0 234 0 0 0 chr5 9404398 9404424 -193681108 + (TG)n Simple_repeat Simple_repeat 2 27 0 342 321 132 6 chr5 9404511 9404670 -193680862 - L2 LINE L2 -10 3303 3125 2692 13 0 10 chr5 9405068 9405372 -193680160 + AluYa5 SINE Alu 1 301 -10 1374 199 55 19 chr5 9406243 9406257 -193679275 - MLT1A1 LTR MaLR -12 353 341 2200 172 39 9 chr5 9406257 9406688 -193678844 - L1MC1 LINE L1 -9 6324 5881 1374 199 55 19 chr5 9406688 9406985 -193678547 - MLT1A1 LTR MaLR -24 341 31 1474 114 42 4 chr5 9406997 9407261 -193678271 - L1MC1 LINE L1 -411 5922 5649 199 325 94 26 chr5 9407271 9407388 -193678144 + MIR SINE MIR 132 256 -6 22 0 0 0 chr5 9408483 9408505 -193677027 + AT_rich Low_complexity Low_complexity 1 22 0 1837 72 13 4 chr5 9409245 9409621 -193675911 - L1P3 LINE L1 -671 5483 5105 3544 34 5 5 chr5 9409621 9410057 -193675475 - L1PA4 LINE L1 -1 6154 5719 2737 25 25 0 chr5 9410057 9410423 -193675109 + L1P2 LINE L1 5285 5659 -495 902 77 97 5 chr5 9410525 9410721 -193674811 - L1P LINE L1 -826 5320 5107 3469 32 11 5 chr5 9410722 9411155 -193674377 - L1PA4 LINE L1 -1 6154 5719 3266 29 2 5 chr5 9411155 9411574 -193673958 + L1PA4 LINE L1 5285 5702 -453 2358 83 0 0 chr5 9411576 9411914 -193673618 - L1P LINE L1 -1036 5110 4773 1833 54 50 8 chr5 9411908 9412169 -193673363 + L1P3 LINE L1 5483 5754 -400 * 3453 127 7 39 chr5 9412733 9413276 -193672256 + MER1A DNA MER1_type 2 527 0 23 33 0 0 chr5 9413666 9413696 -193671836 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 9413888 9413910 -193671622 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 9413987 9414036 -193671496 + AT_rich Low_complexity Low_complexity 1 49 0 729 175 15 0 chr5 9414991 9415128 -193670404 + MLT1F LTR MaLR 404 542 0 194 227 0 107 chr5 9415350 9415425 -193670107 + L2 LINE L2 3247 3313 0 706 216 49 25 chr5 9415566 9415728 -193669804 - FRAM SINE Alu 0 166 1 643 275 5 37 chr5 9415742 9415931 -193669601 - MIR SINE MIR -9 253 71 210 339 169 0 chr5 9415997 9416121 -193669411 + L2 LINE L2 3128 3272 0 622 208 69 25 chr5 9416834 9416993 -193668539 - FRAM SINE Alu 0 166 1 596 289 5 32 chr5 9417009 9417196 -193668336 - MIR SINE MIR -10 252 71 287 331 142 0 chr5 9417263 9417390 -193668142 + L2 LINE L2 3128 3272 0 22 0 0 0 chr5 9418224 9418246 -193667286 + AT_rich Low_complexity Low_complexity 1 22 0 382 280 119 88 chr5 9418317 9418771 -193666761 - HAL1b LINE L1 -661 687 220 245 328 0 0 chr5 9420824 9420891 -193664641 + L2 LINE L2 3187 3253 -60 358 270 6 12 chr5 9423022 9423358 -193662174 + (TG)n Simple_repeat Simple_repeat 1 334 0 466 220 58 62 chr5 9423358 9423545 -193661987 - L1MD2 LINE L1 -89 6077 5959 21 36 0 0 chr5 9424320 9424348 -193661184 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr5 9424544 9424573 -193660959 + AT_rich Low_complexity Low_complexity 1 29 0 502 321 16 25 chr5 9426380 9426597 -193658935 - MIR SINE MIR -31 231 16 374 257 14 42 chr5 9426733 9426877 -193658655 + LTR52 LTR ERVL 11 150 -271 216 292 14 0 chr5 9427618 9427690 -193657842 + L2 LINE L2 2245 2317 -997 379 227 78 31 chr5 9427729 9427857 -193657675 + MLT1J LTR MaLR 51 184 -327 198 179 0 0 chr5 9428106 9428145 -193657387 + L2 LINE L2 2410 2448 -866 236 364 46 31 chr5 9428189 9428384 -193657148 + L2 LINE L2 2575 2772 -542 24 0 0 0 chr5 9428604 9428628 -193656904 + AT_rich Low_complexity Low_complexity 1 24 0 1036 207 49 0 chr5 9428838 9429041 -193656491 + MER58A DNA MER1_type 12 224 0 40 0 0 0 chr5 9429048 9429088 -193656444 + AT_rich Low_complexity Low_complexity 1 40 0 1356 134 0 15 chr5 9429131 9429333 -193656199 + AluSq SINE Alu 103 301 -12 302 286 29 38 chr5 9429556 9429661 -193655871 + L2 LINE L2 2953 3056 -257 188 273 18 0 chr5 9429778 9429833 -193655699 + L2 LINE L2 3227 3282 -31 225 65 0 0 chr5 9429858 9429889 -193655643 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 998 163 0 77 chr5 9431049 9431121 -193654411 + L1PA16 LINE L1 5903 5979 -187 2375 100 0 0 chr5 9431121 9431420 -193654112 + AluSq SINE Alu 1 299 -14 998 163 0 77 chr5 9431420 9431556 -193653976 + L1PA16 LINE L1 5979 6095 -71 5265 168 95 23 chr5 9431567 9432510 -193653022 - LTR28 LTR ERV1 -9 1011 1 305 171 29 0 chr5 9432510 9432580 -193652952 + L1PA16 LINE L1 6095 6166 0 194 287 250 0 chr5 9433319 9433427 -193652105 + L2 LINE L2 3138 3272 0 967 184 162 5 chr5 9433467 9433727 -193651805 - MER51A LTR ERV1 -11 629 334 228 139 0 0 chr5 9433716 9433752 -193651780 - MER51A LTR ERV1 -598 36 1 * 4710 46 0 1 chr5 9434559 9435158 -193650374 - L1P LINE L1 -741 5424 4830 6229 31 19 3 chr5 9435158 9435896 -193649636 + L1PA4 LINE L1 5402 6155 0 406 298 107 28 chr5 9436270 9436589 -193648943 + L2 LINE L2 2921 3264 -49 383 83 33 0 chr5 9437579 9437639 -193647893 - L1MD3 LINE L1 -13 7982 7921 * 578 191 36 0 chr5 9437626 9437736 -193647796 + L1MB5 LINE L1 6024 6137 -37 216 0 0 0 chr5 9438861 9438885 -193646647 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 21 57 0 0 chr5 9439262 9439297 -193646235 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr5 9439748 9439785 -193645747 + (CA)n Simple_repeat Simple_repeat 2 38 0 22 80 0 0 chr5 9442933 9442983 -193642549 + AT_rich Low_complexity Low_complexity 1 50 0 367 195 35 41 chr5 9443029 9443248 -193642284 + (TA)n Simple_repeat Simple_repeat 1 217 0 402 244 111 7 chr5 9443996 9444131 -193641401 - L2 LINE L2 -2 3270 3122 318 26 0 0 chr5 9444499 9444538 -193640994 + (TG)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr5 9444921 9444950 -193640582 + AT_rich Low_complexity Low_complexity 1 29 0 1840 116 81 18 chr5 9445546 9445861 -193639671 - AluSg SINE Alu 0 310 1 383 210 23 0 chr5 9445919 9446095 -193639437 + (TG)n Simple_repeat Simple_repeat 1 180 0 206 322 91 13 chr5 9446853 9446979 -193638553 + MIR SINE MIR 2 133 -75 225 301 0 24 chr5 9448010 9448026 -193637506 + GA-rich Low_complexity Low_complexity 3 18 -65 1528 181 44 17 chr5 9448026 9448324 -193637208 + AluSq SINE Alu 1 306 -7 225 301 0 24 chr5 9448324 9448390 -193637142 + GA-rich Low_complexity Low_complexity 18 83 0 2478 78 5 111 chr5 9450731 9451153 -193634379 + MER51B LTR ERV1 1 377 0 236 310 23 0 chr5 9451179 9451266 -193634266 - MLT1I LTR MaLR -4 405 317 417 302 34 6 chr5 9451430 9451609 -193633923 - MER20 DNA MER1_type 0 219 36 309 344 16 21 chr5 9451764 9451956 -193633576 - L2 LINE L2 -666 2648 2458 223 354 24 24 chr5 9452027 9452154 -193633378 - MER5A DNA MER1_type -25 164 38 302 229 0 0 chr5 9453079 9453140 -193632392 + MLT1I LTR MaLR 348 408 -1 1759 62 0 0 chr5 9454816 9455025 -193630507 + AluY SINE Alu 89 297 -14 2100 138 3 0 chr5 9455149 9455447 -193630085 + AluSx SINE Alu 1 299 -13 2248 137 108 7 chr5 9456098 9456507 -193629025 + LTR7 LTR ERV1 1 450 0 34338 116 10 27 chr5 9456507 9462234 -193623298 + HERVH LTR ERV1 1 5947 -1766 2113 128 67 21 chr5 9462334 9462709 -193622823 - LTR7 LTR ERV1 -58 392 1 2094 82 7 23 chr5 9462709 9463013 -193622519 - HERVH LTR ERV1 0 7713 7415 2811 98 2 62 chr5 9463013 9463463 -193622069 - HERVH LTR ERV1 -134 7579 7157 347 235 49 0 chr5 9463433 9463514 -193622018 - HERVH LTR ERV1 -1670 6043 5959 * 4757 27 0 0 chr5 9463519 9464082 -193621450 - L1PA4 LINE L1 -750 5396 4834 6665 30 3 3 chr5 9464082 9464850 -193620682 + L1PA4 LINE L1 5377 6154 -1 1555 78 46 1 chr5 9464851 9465196 -193620336 + L1P3 LINE L1 5107 5465 -707 225 286 60 24 chr5 9565291 9565375 -193520157 + MIR SINE MIR 145 231 -31 479 214 5 2 chr5 9565677 9566110 -193519422 + (TG)n Simple_repeat Simple_repeat 1 434 0 1996 258 131 35 chr5 9566708 9567679 -193517853 + HAL1 LINE L1 1137 2200 -307 352 364 52 19 chr5 9568015 9568284 -193517248 - L2 LINE L2 -2493 821 544 421 189 56 0 chr5 9569326 9569416 -193516116 + L1MA8 LINE L1 6191 6285 -6 21 0 0 0 chr5 9569417 9569438 -193516094 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 9569841 9569878 -193515654 + (TC)n Simple_repeat Simple_repeat 2 38 0 324 0 0 0 chr5 9569880 9569916 -193515616 + (TG)n Simple_repeat Simple_repeat 1 36 0 1859 202 18 27 chr5 9570298 9570374 -193515158 - L1P LINE L1 -2451 3695 3620 3305 79 9 5 chr5 9570374 9570816 -193514716 + MLT2A1 LTR ERVL 1 444 0 1859 202 18 27 chr5 9570816 9571393 -193514139 - L1P LINE L1 -2526 3620 2856 2001 218 75 32 chr5 9571401 9572097 -193513435 - L1M4 LINE L1 -1052 5094 4372 698 201 67 18 chr5 9572851 9573015 -193512517 + LOR1b LTR ERV1 290 461 0 * 1435 155 49 8 chr5 9573015 9573259 -193512273 - MER74A LTR ERVL -304 254 1 846 177 89 58 chr5 9573259 9573519 -193512013 - MLT1E2 LTR MaLR -322 332 71 405 140 18 9 chr5 9573569 9573683 -193511849 + (TA)n Simple_repeat Simple_repeat 1 115 0 1644 148 3 48 chr5 9573721 9574011 -193511521 + AluSx SINE Alu 31 307 -5 262 314 38 0 chr5 9574266 9574371 -193511161 - L1ME LINE L1 -437 5684 5576 1702 192 35 24 chr5 9575193 9575532 -193510000 + MER61A LTR ERV1 1 343 0 1492 163 67 15 chr5 9576594 9576766 -193508766 - L1MA10 LINE L1 -1 6333 6171 402 108 0 0 chr5 9576766 9576831 -193508701 + (TTGG)n Simple_repeat Simple_repeat 3 67 0 1492 163 67 15 chr5 9576831 9576989 -193508543 - L1MA10 LINE L1 -163 6171 5986 30 0 0 0 chr5 9576992 9577022 -193508510 + AT_rich Low_complexity Low_complexity 1 30 0 17489 112 8 1 chr5 9577022 9580319 -193505213 - L1PA8 LINE L1 -1 6171 2855 531 316 113 0 chr5 9581552 9581729 -193503803 + MIR SINE MIR 22 218 -44 183 179 269 0 chr5 9581935 9582002 -193503530 + L2 LINE L2 3186 3270 -2 212 208 0 21 chr5 9582584 9582632 -193502900 + CT-rich Low_complexity Low_complexity 4 50 0 247 242 88 22 chr5 9584777 9584868 -193500664 + L1M4c LINE L1 1621 1717 -4667 21 36 0 0 chr5 9585016 9585044 -193500488 + AT_rich Low_complexity Low_complexity 1 28 0 391 220 80 0 chr5 9585381 9585481 -193500051 - LTR16C LTR ERVL -4 487 380 5894 129 33 11 chr5 9586127 9586186 -193499346 + L1PA13 LINE L1 3616 3672 -2491 333 0 0 0 chr5 9586186 9586223 -193499309 + (CA)n Simple_repeat Simple_repeat 2 38 0 5894 129 33 11 chr5 9586223 9588607 -193496925 + L1PA13 LINE L1 3672 6148 -15 742 232 38 64 chr5 9588635 9589616 -193495916 + L1ME1 LINE L1 5083 6043 -123 261 0 0 0 chr5 9589815 9589844 -193495688 + (A)n Simple_repeat Simple_repeat 1 29 0 2569 106 25 11 chr5 9589862 9590221 -193495311 + THE1B LTR MaLR 1 364 0 3861 127 28 55 chr5 9590892 9591570 -193493962 + L1MC1 LINE L1 5674 6333 0 343 194 125 56 chr5 9592371 9592515 -193493017 + L1ME2 LINE L1 5700 5856 -308 969 251 24 0 chr5 9592611 9592822 -193492710 - MIR SINE MIR 0 262 47 884 143 0 19 chr5 9593776 9593930 -193491602 - L1MA5 LINE L1 -6 6294 6144 3775 98 11 4 chr5 9593939 9594480 -193491052 + L1P LINE L1 4186 4730 -1416 29260 34 194 5 chr5 9594583 9598520 -193487012 - L1P LINE L1 -1460 4686 4 488 295 80 68 chr5 9599571 9599984 -193485548 + L2 LINE L2 1629 2046 -1268 1601 190 10 13 chr5 9601415 9601715 -193483817 - AluJo SINE Alu -13 299 1 318 275 92 98 chr5 9601867 9602194 -193483338 + L2 LINE L2 1624 1948 -1366 258 208 44 30 chr5 9603463 9603581 -193481951 - MLT1G1 LTR MaLR 0 582 319 187 194 0 28 chr5 9603925 9603961 -193481571 + MIR SINE MIR 31 65 -197 180 247 24 24 chr5 9604175 9604260 -193481272 - L2 LINE L2 -1619 1695 1611 826 210 28 23 chr5 9604897 9605073 -193480459 - MER45A DNA AcHobo 0 178 2 1669 160 65 0 chr5 9605761 9606036 -193479496 - AluSx SINE Alu -19 293 1 28 48 0 0 chr5 9607373 9607415 -193478117 + AT_rich Low_complexity Low_complexity 1 42 0 1485 163 30 22 chr5 9607415 9607685 -193477847 + THE1C LTR MaLR 1 272 -103 6366 100 16 16 chr5 9607685 9609034 -193476498 + L1PA14 LINE L1 4603 5950 -211 1772 161 14 3 chr5 9609034 9609325 -193476207 + AluSx SINE Alu 1 294 -18 6366 100 16 16 chr5 9609325 9609527 -193476005 + L1PA14 LINE L1 5949 6150 -11 25 0 0 0 chr5 9609568 9609593 -193475939 + AT_rich Low_complexity Low_complexity 1 25 0 345 320 8 16 chr5 9609844 9609972 -193475560 + MIR SINE MIR 116 242 -20 13800 148 11 112 chr5 9610509 9613726 -193471806 - L1P LINE L1 -3242 2904 12 1195 265 40 11 chr5 9615459 9615806 -193469726 - LTR16B LTR ERVL 0 464 108 862 318 75 32 chr5 9615920 9616389 -193469143 + MLT1K LTR MaLR 1 489 -99 235 232 146 0 chr5 9616569 9616651 -193468881 + MLT1K LTR MaLR 495 588 0 1014 266 219 18 chr5 9616835 9617030 -193468502 - LTR50 LTR ERVL -30 765 610 2447 51 17 0 chr5 9617030 9617324 -193468208 + L1PA7 LINE L1 5854 6152 -2 1014 266 219 18 chr5 9617324 9617700 -193467832 - LTR50 LTR ERVL -185 610 79 1371 48 0 12 chr5 9620751 9620961 -193464571 + L1PA5 LINE L1 5988 6195 0 470 283 107 22 chr5 9622410 9622667 -193462865 - MLT1H1 LTR MaLR -76 491 190 725 274 17 6 chr5 9622735 9622914 -193462618 - MLT1H1 LTR MaLR -374 181 1 189 296 91 0 chr5 9623667 9623755 -193461777 + MIR SINE MIR 137 232 -30 253 170 21 0 chr5 9625558 9625605 -193459927 - MER5A DNA MER1_type -61 128 81 8315 16 0 3 chr5 9625708 9627154 -193458378 + L1PA2 LINE L1 4711 6155 0 590 181 123 32 chr5 9627811 9627966 -193457566 - ERVL LTR ERVL -2153 3611 3443 241 300 54 56 chr5 9628694 9628838 -193456694 - MIR SINE MIR -64 144 15 322 301 90 9 chr5 9629101 9629217 -193456315 - MIR SINE MIR -62 146 43 197 277 21 0 chr5 9629791 9629838 -193455694 - L2 LINE L2 0 3272 3225 333 330 30 0 chr5 9629914 9630014 -193455518 + MER5A DNA MER1_type 10 112 -77 2707 140 19 19 chr5 9630397 9630825 -193454707 - MSTA LTR MaLR 0 428 1 1913 126 3 85 chr5 9630825 9631190 -193454342 - MSTA-int LTR MaLR 0 1651 1317 * 3089 154 27 8 chr5 9631188 9631708 -193453824 + MSTA-int LTR MaLR 1122 1651 0 2862 120 31 5 chr5 9631708 9632125 -193453407 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 9632409 9632431 -193453101 + AT_rich Low_complexity Low_complexity 1 22 0 313 319 0 0 chr5 9632766 9632857 -193452675 - MIR SINE MIR -77 131 41 729 269 88 70 chr5 9633765 9633971 -193451561 - HAL1 LINE L1 -1383 1124 923 228 35 0 0 chr5 9633971 9634000 -193451532 + (TTG)n Simple_repeat Simple_repeat 2 30 0 729 269 88 70 chr5 9634000 9634356 -193451176 - HAL1 LINE L1 -1584 923 545 713 259 40 0 chr5 9634356 9634557 -193450975 - MER3 DNA MER1_type 0 209 1 729 269 88 70 chr5 9634557 9634688 -193450844 - HAL1 LINE L1 -1962 545 418 322 204 13 112 chr5 9634785 9634937 -193450595 - HAL1 LINE L1 -2271 236 100 662 169 12 0 chr5 9635455 9635615 -193449917 + (TCCA)n Simple_repeat Simple_repeat 1 162 0 265 167 0 0 chr5 9637319 9637361 -193448171 - 5S rRNA rRNA -79 42 1 278 167 0 0 chr5 9637409 9637451 -193448081 - 5S rRNA rRNA -79 42 1 278 167 0 0 chr5 9637554 9637596 -193447936 - 5S rRNA rRNA -79 42 1 971 334 85 27 chr5 9640292 9640930 -193444602 + L2 LINE L2 1378 2052 -1262 526 301 51 20 chr5 9641057 9641253 -193444279 + L2 LINE L2 3112 3313 0 2419 65 0 0 chr5 9641496 9641790 -193443742 + AluY SINE Alu 1 294 -17 1120 240 59 57 chr5 9641816 9642204 -193443328 + MLT1B LTR MaLR 2 390 0 211 109 55 55 chr5 9642335 9642390 -193443142 + (TATTG)n Simple_repeat Simple_repeat 3 57 0 1054 270 77 70 chr5 9642454 9642634 -193442898 - Charlie7 DNA MER1_type -1892 720 543 1465 148 13 4 chr5 9642634 9642863 -193442669 - L1PA13 LINE L1 -19 6144 5914 1054 270 77 70 chr5 9642863 9643396 -193442136 - Charlie7 DNA MER1_type -2069 543 2 231 311 95 0 chr5 9643444 9643518 -193442014 + MER5B DNA MER1_type 92 172 -6 1884 176 9 21 chr5 9643592 9643932 -193441600 + MLT2C1 LTR ERVL 1 336 -61 198 0 0 0 chr5 9643937 9643959 -193441573 + (CA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr5 9643959 9643981 -193441551 + (TG)n Simple_repeat Simple_repeat 2 23 0 1579 196 32 0 chr5 9644023 9644303 -193441229 + AluJb SINE Alu 1 289 -23 501 122 20 10 chr5 9644366 9644464 -193441068 + GA-rich Low_complexity Low_complexity 3 101 0 280 366 49 42 chr5 9644558 9644700 -193440832 + L2 LINE L2 3127 3269 -3 7166 71 6 3 chr5 9644818 9646004 -193439528 + L1PA8 LINE L1 4972 6166 -6 1873 185 26 4 chr5 9646011 9646381 -193439151 - L1MA5 LINE L1 -153 6147 5777 250 268 0 0 chr5 9646334 9646390 -193439142 + L1M2 LINE L1 5668 5723 -577 * 279 294 56 37 chr5 9646601 9646798 -193438734 - L1ME LINE L1 -480 5690 5487 226 318 71 18 chr5 9648057 9648227 -193437305 - HAL1 LINE L1 -938 1569 1391 5913 168 15 26 chr5 9648352 9650506 -193435026 - L1PB1 LINE L1 -3 6148 4028 21 36 0 0 chr5 9650842 9650870 -193434662 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr5 9653036 9653064 -193432468 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 398 286 54 58 chr5 9654279 9654520 -193431012 + MIR SINE MIR 23 262 0 265 281 31 70 chr5 9654755 9654883 -193430649 + MER94 DNA DNA 9 131 -3 185 361 114 32 chr5 9655184 9655342 -193430190 + L2 LINE L2 3101 3271 -1 1675 226 20 6 chr5 9657348 9657698 -193427834 - MER4D LTR ERV1 0 903 549 728 152 23 0 chr5 9657728 9657860 -193427672 - MER49 LTR ERV1 -638 285 151 * 1232 176 23 38 chr5 9657859 9658096 -193427436 - MER49 LTR ERV1 -666 257 23 2011 154 0 0 chr5 9658096 9658401 -193427131 - AluSx SINE Alu -7 305 1 1232 176 23 38 chr5 9658401 9658424 -193427108 - MER49 LTR ERV1 -900 23 1 235 231 0 0 chr5 9658683 9658735 -193426797 + A-rich Low_complexity Low_complexity 4 55 0 2055 144 0 3 chr5 9660236 9660535 -193424997 - AluSx SINE Alu -14 298 1 314 249 61 95 chr5 9660570 9660833 -193424699 + MIR SINE MIR 5 262 0 1915 142 45 10 chr5 9662412 9662701 -193422831 + AluSx SINE Alu 1 299 -13 500 317 61 15 chr5 9663638 9663900 -193421632 + MLT2E LTR ERVL 31 304 -324 195 42 0 0 chr5 9664344 9664368 -193421164 + (TG)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr5 9665553 9665590 -193419942 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 9665616 9665637 -193419895 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 51 45 chr5 9665647 9665825 -193419707 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 24 0 0 0 chr5 9665825 9665849 -193419683 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 9666013 9666042 -193419490 + AT_rich Low_complexity Low_complexity 1 29 0 677 198 0 0 chr5 9666781 9666907 -193418625 + L1MB4 LINE L1 6038 6163 -17 2082 106 19 13 chr5 9667369 9667680 -193417852 + L1PA13 LINE L1 5847 6159 -4 388 253 163 30 chr5 9668264 9668430 -193417102 + MIR SINE MIR 17 204 -58 336 294 91 16 chr5 9669926 9670113 -193415419 + L3 LINE CR1 1066 1266 -311 416 302 72 29 chr5 9671169 9671546 -193413986 - L1MEd LINE L1 -3443 3097 2705 424 167 0 0 chr5 9671579 9671651 -193413881 + MER116 DNA Mariner 6 77 -3 292 239 71 16 chr5 9671668 9671829 -193413703 - L1MEd LINE L1 -3959 2581 2480 1073 153 36 31 chr5 9671974 9672170 -193413362 + MER3 DNA MER1_type 13 209 0 304 167 0 0 chr5 9672127 9672175 -193413357 - MER3 DNA MER1_type -119 90 43 * 454 287 115 69 chr5 9672358 9673022 -193412510 - L1MEd LINE L1 -833 2068 1137 186 143 0 0 chr5 9673130 9673165 -193412367 + (T)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 9673798 9673820 -193411712 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 9674574 9674596 -193410936 + AT_rich Low_complexity Low_complexity 1 22 0 379 270 50 0 chr5 9674833 9674933 -193410599 - MIR3 SINE MIR -4 204 100 254 323 38 70 chr5 9675517 9675703 -193409829 - MIR SINE MIR -37 225 46 297 256 185 31 chr5 9675749 9675944 -193409588 + L2 LINE L2 2828 3052 -220 2108 105 0 3 chr5 9677381 9677675 -193407857 + AluSx SINE Alu 1 293 -19 341 260 77 19 chr5 9678449 9678553 -193406979 + MIR SINE MIR 34 143 -119 207 197 13 26 chr5 9679202 9679278 -193406254 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 461 319 24 0 chr5 9679546 9679715 -193405817 - MER63A DNA MER1_type -37 173 1 2406 219 56 26 chr5 9680363 9681016 -193404516 - L1ME1 LINE L1 -5 6230 5553 1975 123 0 38 chr5 9681016 9681333 -193404199 - AluSx SINE Alu -7 305 1 2406 219 56 26 chr5 9681333 9681372 -193404160 - L1ME1 LINE L1 -682 5553 5517 765 248 50 31 chr5 9681451 9681807 -193403725 - L1ME1 LINE L1 -3766 2480 2108 27 0 0 0 chr5 9682491 9682518 -193403014 + AT_rich Low_complexity Low_complexity 1 27 0 4707 54 7 3 chr5 9682518 9683096 -193402436 - L1PA5 LINE L1 -4 6150 5571 1276 270 101 24 chr5 9683388 9683884 -193401648 - MER90 LTR ERV1 0 614 81 231 105 35 53 chr5 9684462 9684519 -193401013 + A-rich Low_complexity Low_complexity 3 58 0 396 264 31 78 chr5 9685184 9685377 -193400155 + MLT1J2 LTR MaLR 267 450 0 266 198 238 8 chr5 9688093 9688219 -193397313 + LTR33A LTR ERVL 318 472 -51 2112 182 33 12 chr5 9689163 9689587 -193395945 + L1MC1 LINE L1 5899 6331 -2 198 174 0 0 chr5 9689802 9689848 -193395684 + (CA)n Simple_repeat Simple_repeat 1 46 0 916 313 103 53 chr5 9689971 9690708 -193394824 - L1M4 LINE L1 -817 5329 4556 21 0 0 0 chr5 9691315 9691336 -193394196 + AT_rich Low_complexity Low_complexity 1 21 0 1223 232 69 12 chr5 9693635 9693954 -193391578 - MER58B DNA MER1_type -4 337 1 451 313 46 26 chr5 9694202 9694397 -193391135 - MIR SINE MIR 0 262 64 307 227 21 0 chr5 9695395 9695492 -193390040 + (CA)n Simple_repeat Simple_repeat 1 99 0 608 208 17 6 chr5 9695518 9695696 -193389836 + (CA)n Simple_repeat Simple_repeat 1 180 0 238 300 29 0 chr5 9695698 9695768 -193389764 + (CACG)n Simple_repeat Simple_repeat 1 72 0 393 250 17 0 chr5 9695768 9695940 -193389592 + (CA)n Simple_repeat Simple_repeat 1 175 0 190 255 21 0 chr5 9695962 9696056 -193389476 + (CA)n Simple_repeat Simple_repeat 1 96 0 1526 209 65 18 chr5 9696527 9696887 -193388645 + MLT2D LTR ERVL 1 424 -40 291 28 0 0 chr5 9696903 9696939 -193388593 + (TG)n Simple_repeat Simple_repeat 2 37 0 209 108 27 0 chr5 9697179 9697216 -193388316 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 653 274 21 11 chr5 9698963 9699149 -193386383 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 9699745 9699796 -193385736 + A-rich Low_complexity Low_complexity 2 52 0 1792 174 76 0 chr5 9700327 9700643 -193384889 + MSTB LTR MaLR 87 426 0 392 55 103 7 chr5 9700839 9700984 -193384548 + (TA)n Simple_repeat Simple_repeat 1 159 0 540 248 15 7 chr5 9702540 9702677 -193382855 - LTR41 LTR ERVL -618 155 18 437 276 247 17 chr5 9702718 9703062 -193382470 - L2 LINE L2 -71 3242 2820 513 349 0 0 chr5 9703070 9703245 -193382287 + (TG)n Simple_repeat Simple_repeat 1 175 0 972 260 72 16 chr5 9703462 9703766 -193381766 - L2 LINE L2 -512 2802 2482 290 127 18 0 chr5 9705993 9706048 -193379484 - MSTB1 LTR MaLR 0 432 377 339 284 0 23 chr5 9706051 9706139 -193379393 + L1MC4 LINE L1 6614 6699 -1343 1842 182 73 0 chr5 9706139 9706480 -193379052 - MSTB1 LTR MaLR -65 367 2 791 103 0 0 chr5 9706642 9706749 -193378783 + AluSg/x SINE Alu 188 294 -15 620 240 62 5 chr5 9707308 9707500 -193378032 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 9707526 9707573 -193377959 + MLT1L LTR MaLR 567 611 -4 392 178 122 11 chr5 9708741 9708831 -193376701 - MLT1J LTR MaLR 0 511 412 593 270 22 22 chr5 9709023 9709201 -193376331 - MLT1J LTR MaLR -330 181 4 1138 247 160 15 chr5 9709281 9709682 -193375850 - LTR40b LTR ERVL 0 462 4 761 107 0 8 chr5 9711170 9711292 -193374240 - AluY SINE Alu -13 298 178 464 68 0 0 chr5 9711292 9711351 -193374181 - AluY SINE Alu -50 251 193 2042 28 47 0 chr5 9711351 9711605 -193373927 - AluY SINE Alu -44 267 2 1106 260 27 31 chr5 9711782 9711973 -193373559 + L1M4 LINE L1 2128 2318 -3828 330 67 0 0 chr5 9711973 9712018 -193373514 + (TA)n Simple_repeat Simple_repeat 2 46 0 1488 194 3 3 chr5 9712018 9712311 -193373221 - AluJb SINE Alu -3 309 17 1106 260 27 31 chr5 9712311 9712740 -193372792 + L1M4 LINE L1 2316 2792 -3354 189 154 0 0 chr5 9712955 9712994 -193372538 + (CGA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 9713002 9713030 -193372502 + GC_rich Low_complexity Low_complexity 1 28 0 220 194 28 28 chr5 9713040 9713112 -193372420 + (CGGGG)n Simple_repeat Simple_repeat 5 76 0 203 196 36 0 chr5 9713116 9713172 -193372360 + (CCG)n Simple_repeat Simple_repeat 1 58 0 70 24 0 0 chr5 9713308 9713392 -193372140 + GC_rich Low_complexity Low_complexity 1 84 0 249 33 0 0 chr5 9713416 9713446 -193372086 + (CGG)n Simple_repeat Simple_repeat 1 30 0 214 209 7 61 chr5 9713494 9713642 -193371890 + (CGG)n Simple_repeat Simple_repeat 1 140 0 25 51 0 0 chr5 9713677 9713716 -193371816 + GC_rich Low_complexity Low_complexity 1 39 0 198 0 0 0 chr5 9713798 9713820 -193371712 + (CGG)n Simple_repeat Simple_repeat 3 24 0 225 65 0 0 chr5 9713888 9713919 -193371613 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 21 57 0 0 chr5 9714161 9714196 -193371336 + GC_rich Low_complexity Low_complexity 1 35 0 924 256 130 38 chr5 9715353 9715628 -193369904 + L2 LINE L2 2418 2666 -606 2553 106 16 5 chr5 9715628 9715996 -193369536 + L1PA10 LINE L1 5795 6166 -2 924 256 130 38 chr5 9715996 9716293 -193369239 + L2 LINE L2 2666 3034 -238 1570 166 53 111 chr5 9716330 9716818 -193368714 - MLT1C LTR MaLR -4 463 4 231 255 128 60 chr5 9716818 9716967 -193368565 + L2 LINE L2 3152 3310 -3 230 116 0 0 chr5 9717220 9717263 -193368269 + LTR66 LTR ERVL 397 439 -171 1910 142 0 0 chr5 9717300 9717582 -193367950 - AluSx SINE Alu -30 282 1 316 326 67 17 chr5 9717801 9717979 -193367553 + MER5A DNA MER1_type 2 188 -1 1063 220 160 60 chr5 9718043 9718512 -193367020 - MLT1H LTR MaLR -8 541 26 740 223 40 55 chr5 9718511 9718713 -193366819 - MLT1C LTR MaLR -216 251 53 * 338 277 149 76 chr5 9718787 9719116 -193366416 - MLT1J LTR MaLR -50 461 109 348 163 168 0 chr5 9719314 9719394 -193366138 - MLT1C LTR MaLR -295 95 8 388 247 0 0 chr5 9719511 9719592 -193365940 + MER20 DNA MER1_type 5 85 -134 1256 245 29 56 chr5 9720163 9720620 -193364912 - MLT1J2 LTR MaLR -14 429 1 410 260 39 10 chr5 9721344 9721448 -193364084 + MIR SINE MIR 17 123 -139 246 301 173 39 chr5 9722025 9722587 -193362945 - L2 LINE L2 -551 2763 2127 2217 95 3 13 chr5 9723670 9723995 -193361537 - AluSx SINE Alu 0 322 1 1126 176 14 23 chr5 9724047 9724268 -193361264 + AluJo SINE Alu 70 288 -24 286 176 24 24 chr5 9724272 9724357 -193361175 + G-rich Low_complexity Low_complexity 3 87 0 256 59 118 0 chr5 9724350 9724401 -193361131 + GA-rich Low_complexity Low_complexity 1 57 0 * 320 262 155 56 chr5 9724567 9724819 -193360713 - MLT1I LTR MaLR -23 386 110 267 340 19 0 chr5 9726120 9726223 -193359309 + L2 LINE L2 3208 3312 -1 1518 158 82 7 chr5 9727131 9727410 -193358122 + AluJb SINE Alu 1 300 -12 1669 170 20 20 chr5 9728499 9728805 -193356727 + AluJo SINE Alu 1 306 -6 5379 177 22 4 chr5 9729260 9730909 -193354623 + L1PB3 LINE L1 4118 5795 -359 192 96 0 58 chr5 9730909 9730961 -193354571 + (TA)n Simple_repeat Simple_repeat 1 49 0 2423 126 8 13 chr5 9730967 9731341 -193354191 + L1PB3 LINE L1 5782 6153 -1 420 300 90 45 chr5 9731370 9731654 -193353878 + L1ME4a LINE L1 5673 5972 -149 344 320 67 44 chr5 9731836 9732493 -193353039 - L1M4 LINE L1 -1711 4435 3764 1168 257 42 38 chr5 9732771 9733080 -193352452 + L1MEc LINE L1 2120 2426 -3789 330 67 0 0 chr5 9733080 9733125 -193352407 + (TA)n Simple_repeat Simple_repeat 1 45 0 1657 165 3 3 chr5 9733125 9733416 -193352116 - AluJb SINE Alu -3 309 19 1168 257 42 38 chr5 9733416 9734024 -193351508 + L1MEc LINE L1 2426 3030 -3185 2193 124 52 22 chr5 9734024 9734388 -193351144 + THE1C LTR MaLR 1 375 0 1168 257 42 38 chr5 9734388 9734525 -193351007 + L1MEc LINE L1 3030 3183 -3032 2003 126 0 10 chr5 9734525 9734835 -193350697 + AluSg SINE Alu 1 307 -3 1168 257 42 38 chr5 9734835 9734891 -193350641 + L1MEc LINE L1 3183 3237 -2978 735 184 184 14 chr5 9735596 9735808 -193349724 - MER47A DNA MER2_type 0 366 119 540 230 79 0 chr5 9735808 9735960 -193349572 - L1MA4 LINE L1 -53 6247 6084 2159 134 119 0 chr5 9735963 9736350 -193349182 + L1MA4 LINE L1 5606 6038 -262 689 183 15 8 chr5 9736352 9736483 -193349049 - MER47A DNA MER2_type -211 155 24 1510 159 73 14 chr5 9736577 9736866 -193348666 - AluJo SINE Alu -6 306 1 1991 102 16 26 chr5 9738626 9738930 -193346602 - AluSg SINE Alu -9 301 1 442 249 87 22 chr5 9739174 9739403 -193346129 - MER74B LTR ERVL -152 470 227 2117 168 55 2 chr5 9739404 9739808 -193345724 + MSTB LTR MaLR 2 426 0 1584 232 84 9 chr5 9740315 9740742 -193344790 - MER68 LTR ERV1 0 562 104 291 292 184 0 chr5 9740740 9740908 -193344624 - LTR53 LTR ERVL -318 201 3 * 376 238 166 0 chr5 9741891 9742042 -193343490 + MER91A DNA MER1_type 17 192 -4 204 302 35 86 chr5 9742504 9742620 -193342912 + L2 LINE L2 2969 3078 -194 227 215 15 0 chr5 9742733 9742798 -193342734 + (TG)n Simple_repeat Simple_repeat 2 67 0 201 354 122 0 chr5 9743260 9743342 -193342190 - MIR SINE MIR -22 240 149 1643 210 68 23 chr5 9743642 9744081 -193341451 - MLT1C LTR MaLR -1 466 8 231 329 168 7 chr5 9744566 9744715 -193340817 + MIR SINE MIR 12 184 -78 862 279 14 41 chr5 9744960 9745322 -193340210 - L1M4 LINE L1 -417 5761 5410 517 188 70 48 chr5 9745326 9745500 -193340032 + L1MB7 LINE L1 5942 6143 -31 325 261 105 39 chr5 9745941 9746094 -193339438 - LTR23 LTR ERV1 0 437 275 384 191 56 0 chr5 9746782 9746871 -193338661 - L1M4 LINE L1 -803 5343 5250 2269 87 0 13 chr5 9748540 9748849 -193336683 - AluSc SINE Alu -4 305 1 2105 159 0 38 chr5 9749357 9749484 -193336048 + MLT1A1 LTR MaLR 10 140 -225 2236 99 0 0 chr5 9749484 9749786 -193335746 - AluSc SINE Alu -7 302 1 2105 159 0 38 chr5 9749786 9750028 -193335504 + MLT1A1 LTR MaLR 140 365 0 2025 183 30 34 chr5 9750303 9750768 -193334764 + MLT1C LTR MaLR 3 465 -2 505 172 0 11 chr5 9750841 9750928 -193334604 - AluJo SINE Alu -138 174 89 371 220 26 63 chr5 9751497 9751640 -193333892 - L1P3 LINE L1 -369 5785 5645 831 188 27 80 chr5 9751644 9751868 -193333664 - MER20 DNA MER1_type -7 212 1 1736 146 3 17 chr5 9751894 9752219 -193333313 - AluJo SINE Alu 0 312 1 405 332 144 24 chr5 9752219 9752245 -193333287 - L1ME LINE L1 -525 5639 5617 2058 147 129 5 chr5 9752245 9752626 -193332906 + MSTC LTR MaLR 1 428 0 405 332 144 24 chr5 9752626 9752891 -193332641 - L1ME LINE L1 -547 5617 5313 2033 102 3 11 chr5 9753204 9753529 -193332003 - AluSq SINE Alu 0 323 1 549 305 69 24 chr5 9753945 9754191 -193331341 - L1ME LINE L1 -1587 4559 4303 2128 100 30 0 chr5 9754191 9754492 -193331040 + AluSx SINE Alu 1 310 -2 2301 172 66 48 chr5 9754605 9755106 -193330426 + MLT2B2 LTR ERVL 6 515 0 255 333 30 30 chr5 9755635 9755767 -193329765 - MER5A DNA MER1_type -14 175 44 375 154 47 24 chr5 9756248 9756417 -193329115 + (TG)n Simple_repeat Simple_repeat 2 174 0 204 189 33 56 chr5 9756417 9756507 -193329025 + (TATG)n Simple_repeat Simple_repeat 1 88 0 418 136 45 34 chr5 9756507 9756683 -193328849 + (TG)n Simple_repeat Simple_repeat 2 179 0 1860 153 0 0 chr5 9757610 9757938 -193327594 + AluJb SINE Alu 1 328 0 180 0 0 0 chr5 9757938 9757958 -193327574 + (CA)n Simple_repeat Simple_repeat 1 20 0 493 243 90 7 chr5 9757997 9758141 -193327391 - L1MD2 LINE L1 -10 6349 6194 781 257 61 14 chr5 9758265 9758479 -193327053 + MER58A DNA MER1_type 1 224 0 430 296 58 32 chr5 9758481 9758670 -193326862 - MIR3 SINE MIR -3 205 12 392 220 347 0 chr5 9758965 9759115 -193326417 - Charlie8 DNA MER1_type -2146 271 70 769 189 43 49 chr5 9759507 9759692 -193325840 + MER20 DNA MER1_type 36 219 0 432 193 44 44 chr5 9760666 9760801 -193324731 - L1ME4a LINE L1 -5 6116 5982 695 236 154 5 chr5 9760806 9761001 -193324531 + MER58A DNA MER1_type 1 224 0 258 136 0 0 chr5 9761020 9761064 -193324468 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 319 146 21 chr5 9761823 9761967 -193323565 + L2 LINE L2 1283 1444 -1870 1007 196 50 23 chr5 9762449 9762709 -193322823 - L1MB4 LINE L1 0 6180 5914 2146 154 15 62 chr5 9762777 9763243 -193322289 - MER65A LTR ERV1 -1 444 1 192 346 140 37 chr5 9763608 9763822 -193321710 + MIR SINE MIR 8 243 -19 637 256 12 18 chr5 9764521 9764685 -193320847 - MER5B DNA MER1_type -15 163 1 306 228 43 33 chr5 9764733 9764825 -193320707 + MIR3 SINE MIR 116 208 0 952 254 12 75 chr5 9765007 9765168 -193320364 - L1ME3A LINE L1 -53 6117 5947 2535 105 18 37 chr5 9765168 9765326 -193320206 + THE1C LTR MaLR 1 160 -215 2121 113 0 0 chr5 9765326 9765618 -193319914 - AluSx SINE Alu -18 294 3 2535 105 18 37 chr5 9765618 9765841 -193319691 + THE1C LTR MaLR 160 375 0 952 254 12 75 chr5 9765841 9765910 -193319622 - L1ME3A LINE L1 -223 5947 5912 2448 43 3 13 chr5 9765910 9766213 -193319319 - AluY SINE Alu -11 300 1 952 254 12 75 chr5 9766213 9766315 -193319217 - L1ME3A LINE L1 -258 5912 5805 1576 179 113 24 chr5 9766315 9766650 -193318882 + MLT1A1 LTR MaLR 1 365 0 378 138 90 2 chr5 9766657 9766755 -193318777 - L1ME3A LINE L1 -376 5802 5689 311 323 36 52 chr5 9767799 9768157 -193317375 - L3 LINE CR1 -87 1490 1094 242 225 42 33 chr5 9768175 9768295 -193317237 + (CA)n Simple_repeat Simple_repeat 1 121 0 * 247 235 17 43 chr5 9768215 9768330 -193317202 + (CAATA)n Simple_repeat Simple_repeat 5 116 0 210 185 37 19 chr5 9768339 9768447 -193317085 + (CA)n Simple_repeat Simple_repeat 1 110 0 261 270 15 44 chr5 9768933 9769070 -193316462 - L1ME3A LINE L1 0 6170 6038 738 259 145 55 chr5 9769103 9769832 -193315700 - L1MEc LINE L1 -2171 4044 3250 1963 108 7 27 chr5 9769982 9770277 -193315255 - AluSx SINE Alu -23 289 1 644 264 85 59 chr5 9770302 9770947 -193314585 - L1MEc LINE L1 -4872 1524 863 3525 121 11 15 chr5 9772098 9772627 -193312905 + MER1A DNA MER1_type 1 527 0 507 206 219 43 chr5 9772864 9773097 -193312435 - LOR1b LTR ERV1 -109 352 79 1120 206 66 8 chr5 9773124 9773381 -193312151 + MER74A LTR ERVL 250 521 -37 1351 251 29 0 chr5 9773462 9773769 -193311763 + MLT1E2 LTR MaLR 311 626 0 303 93 0 0 chr5 9773774 9773817 -193311715 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2346 116 29 0 chr5 9775702 9776046 -193309486 + L1PB3 LINE L1 5800 6153 -1 668 276 61 0 chr5 9776260 9776574 -193308958 + L2 LINE L2 2779 3114 -199 209 294 124 62 chr5 9776749 9776926 -193308606 + L2 LINE L2 3112 3299 -14 1181 226 66 84 chr5 9777218 9777712 -193307820 + MLT1J LTR MaLR 1 485 -26 767 188 60 0 chr5 9777712 9777861 -193307671 - MER90 LTR ERV1 0 575 418 227 349 122 4 chr5 9778806 9779061 -193306471 - L2 LINE L2 -160 3112 2828 235 292 0 14 chr5 9779260 9779332 -193306200 + MLT1H LTR MaLR 139 209 -340 * 935 132 0 0 chr5 9779321 9779457 -193306075 + MSTA LTR MaLR 293 428 0 21 0 0 0 chr5 9780169 9780190 -193305342 + AT_rich Low_complexity Low_complexity 1 21 0 1790 214 59 0 chr5 9780790 9781196 -193304336 + L1MD3 LINE L1 7547 7976 -19 2077 112 137 3 chr5 9781459 9781781 -193303751 + MLT2A2 LTR ERVL 1 365 -88 1233 102 10 56 chr5 9781783 9781980 -193303552 + THE1B LTR MaLR 177 364 0 1324 194 164 44 chr5 9782055 9782488 -193303044 + MLT1D LTR MaLR 1 485 -20 1046 263 89 9 chr5 9782960 9783298 -193302234 - MLT1A1 LTR MaLR 0 365 1 490 236 73 55 chr5 9783860 9784080 -193301452 - LTR67 LTR ERVL -266 291 68 257 209 0 0 chr5 9784120 9784163 -193301369 + polypurine Low_complexity Low_complexity 3 45 0 2188 94 0 13 chr5 9784207 9784505 -193301027 - AluSq SINE Alu -19 294 1 29 28 0 0 chr5 9785013 9785049 -193300483 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 9785276 9785298 -193300234 + AT_rich Low_complexity Low_complexity 1 22 0 2034 133 3 3 chr5 9785579 9785880 -193299652 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr5 9785918 9785949 -193299583 + AT_rich Low_complexity Low_complexity 1 31 0 3040 181 160 96 chr5 9786001 9786289 -193299243 + L1MC3 LINE L1 6714 6982 -803 225 65 0 0 chr5 9786289 9786320 -193299212 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3040 181 160 96 chr5 9786320 9786376 -193299156 + L1MC3 LINE L1 6982 7033 -752 281 286 0 0 chr5 9786376 9786453 -193299079 + MLT1F1 LTR MaLR 35 111 -456 3040 181 160 96 chr5 9786453 9787021 -193298511 + L1MC3 LINE L1 7033 7766 -19 381 185 60 7 chr5 9787037 9787188 -193298344 + (TA)n Simple_repeat Simple_repeat 1 159 0 203 188 45 8 chr5 9787199 9787332 -193298200 + (TA)n Simple_repeat Simple_repeat 2 139 0 307 320 137 34 chr5 9787502 9787949 -193297583 + L1M4 LINE L1 3716 4208 -1938 1541 144 26 58 chr5 9788439 9788820 -193296712 - L1PA13 LINE L1 -1 6162 5794 21 57 0 0 chr5 9789283 9789318 -193296214 + AT_rich Low_complexity Low_complexity 1 35 0 18937 100 11 31 chr5 9789336 9792091 -193293441 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 9792166 9792342 -193293190 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 9792380 9792563 -193292969 + (CA)n Simple_repeat Simple_repeat 1 180 0 312 281 0 0 chr5 9792599 9792777 -193292755 + (CA)n Simple_repeat Simple_repeat 2 179 0 515 260 0 7 chr5 9794048 9794351 -193291181 + (CA)n Simple_repeat Simple_repeat 1 300 0 1072 244 83 77 chr5 9794666 9795162 -193290370 + MLT1F1 LTR MaLR 68 566 -1 1268 147 7 8 chr5 9795473 9795694 -193289838 - MLT2B3 LTR ERVL -195 219 1 1566 233 37 22 chr5 9795698 9796157 -193289375 - MLT1C LTR MaLR -1 466 1 228 275 65 36 chr5 9798367 9798505 -193287027 + L1MC4a LINE L1 5254 5395 -2413 500 251 212 8 chr5 9798621 9798880 -193286652 + L2 LINE L2 2598 2909 -405 226 182 23 0 chr5 9798883 9798927 -193286605 + MLT1G LTR MaLR 1 45 -550 2002 183 39 9 chr5 9798928 9799305 -193286227 + MLT2D LTR ERVL 1 480 -40 243 0 0 0 chr5 9799319 9799346 -193286186 + (TG)n Simple_repeat Simple_repeat 2 28 0 1287 204 31 40 chr5 9799486 9799836 -193285696 + MLT1G LTR MaLR 161 571 0 615 280 69 55 chr5 9799884 9800263 -193285269 + L2 LINE L2 2926 3309 -4 1126 287 30 38 chr5 9800290 9800816 -193284716 + L1MC4a LINE L1 5407 5928 -1880 1279 229 93 41 chr5 9802117 9802557 -193282975 + MLT1C LTR MaLR 1 463 -4 204 214 89 0 chr5 9802590 9802646 -193282886 + L2 LINE L2 3210 3270 -2 326 330 89 10 chr5 9804327 9804530 -193281002 + MIR SINE MIR 16 234 -28 21 36 0 0 chr5 9804758 9804786 -193280746 + AT_rich Low_complexity Low_complexity 1 28 0 1942 105 66 21 chr5 9805664 9805950 -193279582 - AluSq SINE Alu -13 300 2 1610 173 24 64 chr5 9806171 9806546 -193278986 + MLT1A1 LTR MaLR 1 360 -5 2482 61 3 3 chr5 9806729 9807025 -193278507 + AluY SINE Alu 1 296 -15 1163 232 95 34 chr5 9807333 9807585 -193277947 - MLT1C LTR MaLR 0 467 183 2229 109 0 0 chr5 9807585 9807878 -193277654 - AluSc SINE Alu -16 293 1 1163 232 95 34 chr5 9807878 9808005 -193277527 - MLT1C LTR MaLR -284 183 65 2324 102 50 44 chr5 9808143 9808354 -193277178 - THE1B LTR MaLR 0 364 148 2036 114 4 4 chr5 9808354 9808664 -193276868 + AluSc SINE Alu 1 310 0 2324 102 50 44 chr5 9808664 9808813 -193276719 - THE1B LTR MaLR -216 148 1 310 217 98 22 chr5 9809546 9809638 -193275894 - MLT1D LTR MaLR -356 149 51 230 285 156 38 chr5 9810848 9811034 -193274498 + MIR SINE MIR 31 238 -24 628 201 98 24 chr5 9813127 9813291 -193272241 - MER45A DNA AcHobo 0 178 3 5427 106 24 20 chr5 9813583 9813616 -193271916 + L1PA16 LINE L1 5332 5363 -803 1156 59 0 182 chr5 9813616 9813852 -193271680 + 7SK RNA RNA 1 193 0 5427 106 24 20 chr5 9813852 9814649 -193270883 + L1PA16 LINE L1 5363 6165 -1 2262 100 0 10 chr5 9815340 9815649 -193269883 + AluSg SINE Alu 2 307 -3 316 215 88 73 chr5 9815650 9815855 -193269677 + L1M4 LINE L1 3115 3322 -2824 2652 243 43 28 chr5 9815859 9816817 -193268715 + L1M4 LINE L1 3575 4546 -1600 887 97 0 0 chr5 9816822 9816935 -193268597 - AluSq SINE Alu -48 265 153 607 256 6 0 chr5 9816942 9817098 -193268434 + L1M4 LINE L1 4563 4719 -1427 360 0 0 0 chr5 9817165 9817205 -193268327 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 166 7 0 chr5 9817208 9817347 -193268185 - FLAM_C SINE Alu -3 140 1 25 0 0 0 chr5 9818128 9818153 -193267379 + AT_rich Low_complexity Low_complexity 1 25 0 1797 127 67 0 chr5 9818253 9818520 -193267012 - AluSq SINE Alu -28 285 1 244 215 83 42 chr5 9818863 9819007 -193266525 + L1M4 LINE L1 5189 5338 -808 903 85 0 0 chr5 9819302 9819420 -193266112 - AluY SINE Alu -21 290 173 387 0 0 0 chr5 9819476 9819519 -193266013 + (CA)n Simple_repeat Simple_repeat 2 44 0 2536 186 35 2 chr5 9819538 9820027 -193265505 - MLT1D LTR MaLR 0 505 1 180 0 0 0 chr5 9820102 9820122 -193265410 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 104 0 0 chr5 9820136 9820213 -193265319 + AT_rich Low_complexity Low_complexity 1 77 0 456 294 0 27 chr5 9820328 9820512 -193265020 + (TG)n Simple_repeat Simple_repeat 2 180 0 186 261 0 0 chr5 9822002 9822048 -193263484 + L2 LINE L2 3015 3060 -253 224 156 0 0 chr5 9822754 9822799 -193262733 + L2 LINE L2 3018 3062 -210 1762 71 0 0 chr5 9823337 9823548 -193261984 - AluSg/x SINE Alu -25 287 77 1963 131 103 25 chr5 9823675 9824042 -193261490 + MLT2C1 LTR ERVL 2 397 0 710 141 43 12 chr5 9826106 9826418 -193259114 + (CA)n Simple_repeat Simple_repeat 1 321 0 1487 190 65 50 chr5 9826424 9826808 -193258724 + MLT1B LTR MaLR 1 390 0 1913 289 52 72 chr5 9826817 9827792 -193257740 - ERVL LTR ERVL -2955 2809 1854 398 292 39 8 chr5 9827822 9827952 -193257580 + L2 LINE L2 3138 3271 -1 1280 215 134 6 chr5 9828576 9828911 -193256621 - L1MD3 LINE L1 -13 7982 7605 1386 222 57 40 chr5 9829281 9829651 -193255881 - MLT2B3 LTR ERVL -4 550 175 313 259 65 0 chr5 9829657 9829765 -193255767 - MLT1J2 LTR MaLR -313 137 23 180 240 87 87 chr5 9830642 9830746 -193254786 + L2 LINE L2 2729 2832 -482 614 241 143 52 chr5 9831064 9831424 -193254108 - MLT1J2 LTR MaLR -1 445 41 1180 275 142 53 chr5 9831512 9832133 -193253399 - MER50 LTR ERV1 -58 676 1 257 262 71 24 chr5 9833145 9833229 -193252303 + MER91B DNA MER1_type 44 131 -59 292 321 12 0 chr5 9833242 9833326 -193252206 + MER91B DNA MER1_type 93 177 -13 4237 129 41 124 chr5 9833732 9834776 -193250756 - L1MC2 LINE L1 -11 6333 5377 2067 108 3 0 chr5 9835523 9835830 -193249702 + AluSx SINE Alu 1 312 0 208 358 42 0 chr5 9835974 9836069 -193249463 + L3 LINE CR1 1459 1557 -20 1870 136 3 3 chr5 9836260 9836554 -193248978 - L1PB1 LINE L1 -1 6150 5857 3957 118 21 4 chr5 9836554 9837279 -193248253 + L1PB1 LINE L1 5117 5853 -298 320 309 73 0 chr5 9837443 9837553 -193247979 + L2 LINE L2 3155 3272 0 224 319 43 76 chr5 9840389 9840574 -193244958 + L3 LINE CR1 597 775 -802 30 45 0 0 chr5 9841420 9841464 -193244068 + AT_rich Low_complexity Low_complexity 1 44 0 2311 61 7 3 chr5 9841652 9841946 -193243586 + AluY SINE Alu 1 295 -16 826 235 90 45 chr5 9842720 9843103 -193242429 - MLT1C LTR MaLR -1 466 12 1755 167 0 3 chr5 9843395 9843688 -193241844 + AluJb SINE Alu 1 292 -20 263 250 114 0 chr5 9844136 9844214 -193241318 + MIR3 SINE MIR 110 200 -8 2245 104 0 0 chr5 9844214 9844523 -193241009 - AluSx SINE Alu -3 309 1 239 282 220 22 chr5 9845974 9846247 -193239285 - L2 LINE L2 -342 2972 2646 2222 110 0 0 chr5 9846268 9846578 -193238954 + AluSx SINE Alu 1 310 -2 852 152 0 0 chr5 9846714 9846846 -193238686 - AluSq/x SINE Alu -180 132 1 1695 147 109 32 chr5 9847013 9847361 -193238171 + THE1C LTR MaLR 1 375 0 300 354 31 36 chr5 9848467 9848659 -193236873 - HAL1b LINE L1 -1052 296 106 2478 44 0 0 chr5 9848692 9848987 -193236545 + AluY SINE Alu 1 295 -16 1733 129 42 18 chr5 9848989 9849275 -193236257 - AluJo SINE Alu -19 293 1 431 133 0 0 chr5 9849367 9849427 -193236105 + 5S rRNA rRNA 31 90 -31 2044 135 0 0 chr5 9849759 9850062 -193235470 - AluSx SINE Alu -9 303 1 403 314 128 33 chr5 9851047 9851468 -193234064 - L1MEd LINE L1 -5198 921 461 240 345 73 0 chr5 9851471 9851636 -193233896 - L1MEd LINE L1 -5939 180 4 1696 151 4 0 chr5 9853371 9853636 -193231896 + AluSx SINE Alu 1 266 -46 246 32 0 0 chr5 9853650 9853681 -193231851 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1981 120 7 14 chr5 9853755 9854047 -193231485 + AluSx SINE Alu 2 291 -21 1854 135 10 13 chr5 9855215 9855519 -193230013 - AluJb SINE Alu -9 303 1 1403 187 73 0 chr5 9856440 9856592 -193228940 - AluJo SINE Alu -19 293 154 207 0 0 0 chr5 9856592 9856615 -193228917 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1403 187 73 0 chr5 9856615 9856735 -193228797 - AluJo SINE Alu -158 154 1 407 232 21 0 chr5 9857046 9857141 -193228391 - MIR SINE MIR -98 164 68 849 40 0 151 chr5 9857235 9857533 -193227999 + L1PA3 LINE L1 5891 6143 -12 346 266 65 16 chr5 9857650 9857774 -193227758 - L1 LINE L1 -2945 3201 3072 242 194 28 28 chr5 9857834 9857906 -193227626 + (CCCCG)n Simple_repeat Simple_repeat 5 76 0 21 36 0 0 chr5 9857916 9857944 -193227588 + GC_rich Low_complexity Low_complexity 1 28 0 180 158 0 0 chr5 9857952 9857990 -193227542 + (TCG)n Simple_repeat Simple_repeat 2 39 0 31 0 0 0 chr5 9858053 9858084 -193227448 + GC_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr5 9858137 9858168 -193227364 + GC_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 9858279 9858315 -193227217 + GC_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 9858362 9858396 -193227136 + GC_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 9858789 9858819 -193226713 + AT_rich Low_complexity Low_complexity 1 30 0 1423 228 102 28 chr5 9863443 9863966 -193221566 - MLT1E3 LTR MaLR 0 624 18 807 97 0 0 chr5 9864219 9864379 -193221153 + AluSc SINE Alu 168 327 0 198 0 0 0 chr5 9866204 9866226 -193219306 + (T)n Simple_repeat Simple_repeat 1 22 0 957 159 53 0 chr5 9866502 9866672 -193218860 + MER3 DNA MER1_type 1 179 -30 259 326 47 29 chr5 9867046 9867218 -193218314 - MIR SINE MIR -17 245 71 180 286 57 14 chr5 9867738 9867808 -193217724 - MIR SINE MIR -118 144 72 343 296 11 0 chr5 9868552 9868640 -193216892 - MIR SINE MIR -161 101 13 2221 104 0 0 chr5 9868698 9869005 -193216527 + AluY SINE Alu 1 307 -4 262 330 11 11 chr5 9869777 9869871 -193215661 - MIR SINE MIR -4 258 165 196 308 49 56 chr5 9871209 9871352 -193214180 + L2 LINE L2 2921 3062 -251 308 247 12 35 chr5 9871946 9872031 -193213501 - MER117 DNA MER1_type -60 137 55 270 109 18 18 chr5 9872483 9872538 -193212994 - L1ME4a LINE L1 -10 6111 6057 262 276 29 48 chr5 9872855 9872960 -193212572 + MIR SINE MIR 82 184 -78 180 0 0 0 chr5 9874413 9874433 -193211099 + (A)n Simple_repeat Simple_repeat 1 20 0 826 186 12 12 chr5 9875201 9875362 -193210170 - FRAM SINE Alu -5 161 1 196 314 14 43 chr5 9877716 9877786 -193207746 - L2 LINE L2 -10 3303 3236 2243 115 0 16 chr5 9879406 9879719 -193205813 - AluSc SINE Alu -1 308 1 470 281 22 14 chr5 9884484 9884623 -193200909 - MIR SINE MIR -35 227 88 207 250 42 94 chr5 9887138 9887234 -193198298 + MER5A DNA MER1_type 92 182 -7 427 246 108 0 chr5 9889055 9889222 -193196310 + MER3 DNA MER1_type 3 187 -22 207 292 31 62 chr5 9890871 9890967 -193194565 - L2 LINE L2 -1 3271 3179 1506 168 70 16 chr5 9893555 9893924 -193191608 - Charlie5 DNA MER1_type 0 2624 2236 26 50 0 0 chr5 9894522 9894562 -193190970 + AT_rich Low_complexity Low_complexity 1 40 0 2138 145 0 3 chr5 9897914 9898217 -193187315 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 9900408 9900432 -193185100 + AT_rich Low_complexity Low_complexity 1 24 0 1296 138 0 0 chr5 9900991 9901172 -193184360 + AluSg/x SINE Alu 120 300 -12 2095 113 3 0 chr5 9901452 9901754 -193183778 - AluSx SINE Alu 0 303 1 239 306 74 19 chr5 9903567 9903675 -193181857 - MIR3 SINE MIR -14 194 81 363 221 102 31 chr5 9904441 9904568 -193180964 + MIR SINE MIR 27 162 -46 229 245 0 0 chr5 9904915 9904964 -193180568 + MLT1L LTR MaLR 4 52 -563 525 133 37 3 chr5 9904967 9905103 -193180429 + MER53 DNA DNA 1 184 -5 372 306 137 32 chr5 9905229 9905477 -193180055 + MLT1J LTR MaLR 238 511 0 556 259 57 31 chr5 9906217 9906410 -193179122 - MER5C DNA MER1_type -3 321 124 243 293 60 26 chr5 9906732 9906848 -193178684 - MER5B DNA MER1_type -58 120 1 21 0 0 0 chr5 9907003 9907024 -193178508 + AT_rich Low_complexity Low_complexity 1 21 0 1193 40 14 0 chr5 9912007 9912155 -193173377 + L1PA2 LINE L1 6006 6155 0 566 219 5 110 chr5 9912313 9912370 -193173162 + L1M4 LINE L1 3294 3355 -2791 1537 133 12 40 chr5 9912370 9912618 -193172914 - AluJo SINE Alu -14 298 58 566 219 5 110 chr5 9912618 9912779 -193172753 + L1M4 LINE L1 3355 3489 -2657 19417 123 35 27 chr5 9912907 9916381 -193169151 + L1P LINE L1 12 3513 -2633 4508 74 0 0 chr5 9916381 9916947 -193168585 + L1PA7 LINE L1 5586 6152 -2 537 253 6 77 chr5 9917014 9917138 -193168394 + L1ME1 LINE L1 5993 6102 -64 2462 70 3 0 chr5 9917138 9917436 -193168096 - AluSp SINE Alu -14 299 1 537 253 6 77 chr5 9917436 9917493 -193168039 + L1ME1 LINE L1 6102 6161 -5 4812 205 82 10 chr5 9918823 9919204 -193166328 + Cheshire DNA MER1_type 532 884 -1536 1767 171 51 3 chr5 9919204 9919496 -193166036 + AluJb SINE Alu 1 306 -6 4812 205 82 10 chr5 9919496 9920845 -193164687 + Cheshire DNA MER1_type 884 2415 -5 683 134 79 31 chr5 9922139 9922266 -193163266 + FLAM_C SINE Alu 1 133 0 216 290 197 2 chr5 9922561 9922683 -193162849 - MIR SINE MIR -62 146 9 297 250 138 20 chr5 9922801 9922997 -193162535 + L1ME4a LINE L1 5881 6099 -22 999 219 90 68 chr5 9924157 9924477 -193161055 + MER93b LTR ERV1 1 331 -42 1739 124 98 0 chr5 9924477 9924742 -193160790 - AluSq SINE Alu -22 291 1 999 219 90 68 chr5 9924742 9924786 -193160746 + MER93b LTR ERV1 331 373 0 217 198 77 121 chr5 9925982 9926073 -193159459 + L2 LINE L2 3186 3272 0 307 344 118 24 chr5 9927164 9927376 -193158156 - MIR SINE MIR -16 246 15 246 204 0 0 chr5 9927807 9927851 -193157681 - MIR SINE MIR -147 115 72 1198 132 0 16 chr5 9928416 9928624 -193156908 - AluSg/x SINE Alu 0 338 134 2115 68 4 4 chr5 9931684 9931989 -193153543 - AluY SINE Alu 0 305 1 1391 129 0 0 chr5 9932286 9932495 -193153037 + AluSg/x SINE Alu 89 297 -13 1541 173 80 26 chr5 9932785 9933137 -193152395 - THE1C LTR MaLR 0 375 5 1858 147 0 7 chr5 9933748 9934041 -193151491 - AluJb SINE Alu -21 291 1 1678 167 17 0 chr5 9934449 9934736 -193150796 - AluSq SINE Alu -21 292 1 309 130 0 0 chr5 9935046 9935092 -193150440 - FLAM SINE Alu -7 126 81 1408 152 110 15 chr5 9936157 9936421 -193149111 + AluSx SINE Alu 5 293 -19 31 0 0 0 chr5 9936453 9936484 -193149048 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 9936664 9936693 -193148839 + AT_rich Low_complexity Low_complexity 1 29 0 404 319 105 26 chr5 9938524 9938790 -193146742 + L3 LINE CR1 626 912 -665 201 74 0 0 chr5 9939739 9939766 -193145766 + (T)n Simple_repeat Simple_repeat 1 27 0 637 255 30 81 chr5 9939874 9939930 -193145602 - MIR SINE MIR 0 262 205 2336 88 3 0 chr5 9939930 9940238 -193145294 - AluSp SINE Alu -4 309 1 637 255 30 81 chr5 9940238 9940416 -193145116 - MIR SINE MIR -57 205 40 2433 57 0 0 chr5 9941038 9941337 -193144195 - AluY SINE Alu -12 299 1 258 32 0 0 chr5 9941431 9941462 -193144070 + (TTA)n Simple_repeat Simple_repeat 1 31 0 199 286 143 0 chr5 9941486 9941556 -193143976 + MIR SINE MIR 7 86 -176 23 33 0 0 chr5 9945742 9945772 -193139760 + AT_rich Low_complexity Low_complexity 1 30 0 3323 203 20 16 chr5 9946131 9946865 -193138667 - L1MB3 LINE L1 -10 6173 5437 195 171 0 29 chr5 9947925 9947960 -193137572 - MIR SINE MIR -142 66 33 2322 81 10 0 chr5 9948747 9949055 -193136477 - AluSx SINE Alu -1 311 1 917 248 22 47 chr5 9950703 9951025 -193134507 - L1MB7 LINE L1 -10 6174 5861 22 0 0 0 chr5 9951404 9951426 -193134106 + AT_rich Low_complexity Low_complexity 1 22 0 2071 99 27 10 chr5 9952169 9952463 -193133069 - AluSx SINE Alu -13 299 1 1635 160 0 45 chr5 9952492 9952804 -193132728 + AluJb SINE Alu 1 298 -14 216 300 171 33 chr5 9953290 9953500 -193132032 - L3 LINE CR1 -912 665 427 227 273 45 0 chr5 9954065 9954131 -193131401 - Charlie5 DNA MER1_type -2543 69 1 209 346 39 0 chr5 9954740 9954818 -193130714 + MIR SINE MIR 59 139 -123 183 240 60 0 chr5 9955940 9955990 -193129542 - L3 LINE CR1 -1169 408 356 2429 43 0 7 chr5 9956285 9956586 -193128946 + AluY SINE Alu 1 299 -12 1760 132 11 0 chr5 9956904 9957169 -193128363 + AluSg SINE Alu 28 295 -15 2413 69 3 0 chr5 9959156 9959460 -193126072 - AluY SINE Alu -6 305 1 276 342 37 19 chr5 9960860 9961021 -193124511 - MIR SINE MIR -41 221 58 23 0 0 0 chr5 9963310 9963333 -193122199 + AT_rich Low_complexity Low_complexity 1 23 0 1956 270 124 21 chr5 9963873 9964829 -193120703 - L1MC4 LINE L1 -52 7990 6936 589 282 108 35 chr5 9964919 9965291 -193120241 + HAL1 LINE L1 578 976 -1531 245 289 138 36 chr5 9965711 9966016 -193119516 + L1MC4a LINE L1 5688 6023 -1785 1574 202 136 0 chr5 9966069 9966436 -193119096 - MER47B DNA MER2_type 0 418 2 312 217 79 21 chr5 9966744 9966895 -193118637 + MLT1F LTR MaLR 24 189 -378 2373 204 78 2 chr5 9966911 9967425 -193118107 - MER68 LTR ERV1 0 562 10 439 226 0 39 chr5 9967467 9967569 -193117963 + MLT1F LTR MaLR 314 411 -182 2383 128 0 0 chr5 9967619 9967954 -193117578 - THE1B LTR MaLR 0 364 30 4766 132 69 55 chr5 9967973 9968859 -193116673 - MER49 LTR ERV1 -25 898 1 618 194 45 8 chr5 9968859 9968992 -193116540 + MLT1F LTR MaLR 405 542 0 602 230 11 79 chr5 9968992 9969131 -193116401 + MIR SINE MIR 69 195 -67 4309 71 54 2 chr5 9969131 9969709 -193115823 + LTR14B LTR ERVK 1 608 0 602 230 11 79 chr5 9969709 9969747 -193115785 + MIR SINE MIR 195 234 -28 748 223 127 75 chr5 9970622 9970968 -193114564 - LTR16A LTR ERVL -2 448 85 2379 55 0 23 chr5 9971158 9971468 -193114064 + AluY SINE Alu 1 303 -8 510 296 102 39 chr5 9973128 9973166 -193112366 - L1MC4a LINE L1 -1842 5966 5932 1901 141 10 0 chr5 9973166 9973457 -193112075 - AluSx SINE Alu -18 294 1 510 296 102 39 chr5 9973457 9973780 -193111752 - L1MC4a LINE L1 -1876 5932 5582 456 275 85 106 chr5 9973852 9975128 -193110404 + L1M2 LINE L1 1595 4189 -2659 317 330 77 84 chr5 9975194 9975727 -193109805 + L1M4 LINE L1 3956 4484 -2364 272 252 16 32 chr5 9975906 9976029 -193109503 + L1M4 LINE L1 4630 4750 -2098 833 133 15 30 chr5 9976050 9976185 -193109347 - AluSq/x SINE Alu -179 134 2 337 282 77 29 chr5 9976400 9976570 -193108962 + L1M4 LINE L1 5906 6083 -765 315 176 305 53 chr5 9977199 9977330 -193108202 + L2 LINE L2 3147 3310 -3 1293 213 168 22 chr5 9978860 9979264 -193106268 - MLT1C LTR MaLR 0 467 5 207 224 41 0 chr5 9979900 9979949 -193105583 + CT-rich Low_complexity Low_complexity 3 53 0 22 35 0 0 chr5 9981043 9981072 -193104460 + GC_rich Low_complexity Low_complexity 1 29 0 241 256 124 41 chr5 9982451 9982572 -193102960 + MIR3 SINE MIR 74 204 -4 1616 188 161 49 chr5 9982581 9982766 -193102766 + LTR44 LTR ERV1 1 164 -355 775 224 18 12 chr5 9982766 9982931 -193102601 - FRAM SINE Alu 0 166 1 1616 188 161 49 chr5 9982931 9983212 -193102320 + LTR44 LTR ERV1 164 519 0 328 310 123 7 chr5 9983498 9983653 -193101879 + L1MC4a LINE L1 5265 5437 -727 668 303 100 20 chr5 9983678 9984028 -193101504 + L1MC4a LINE L1 5517 5894 -1914 2185 141 33 33 chr5 9984627 9984989 -193100543 + THE1B LTR MaLR 3 364 0 1060 188 0 11 chr5 9986763 9986949 -193098583 - AluJb SINE Alu -10 302 119 1695 191 13 34 chr5 9986953 9987323 -193098209 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 9987442 9987472 -193098060 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2566 65 10 0 chr5 9988211 9988519 -193097013 - AluY SINE Alu 0 311 1 2396 97 0 3 chr5 9988521 9988821 -193096711 - AluSg SINE Alu -11 299 1 538 241 82 55 chr5 9989022 9989279 -193096253 - LTR37B LTR ERV1 -64 404 141 540 219 48 37 chr5 9989991 9990178 -193095354 + MER53 DNA DNA 1 189 0 371 232 18 9 chr5 9990406 9990518 -193095014 - MER89 LTR ERV1 0 559 447 634 192 41 7 chr5 9990892 9991038 -193094494 + MER20 DNA MER1_type 3 153 -66 509 236 76 55 chr5 9991486 9991761 -193093771 - MLT2F LTR ERVL -149 514 234 240 299 39 24 chr5 9991795 9991922 -193093610 - MLT2F LTR ERVL -533 130 2 479 111 0 67 chr5 9992181 9992271 -193093261 + FLAM_C SINE Alu 60 143 0 401 210 5 38 chr5 9992358 9992544 -193092988 + CT-rich Low_complexity Low_complexity 1 180 0 372 315 0 0 chr5 9993044 9993206 -193092326 + A-rich Low_complexity Low_complexity 1 162 0 429 110 37 0 chr5 9993344 9993426 -193092106 + CT-rich Low_complexity Low_complexity 4 88 0 21 57 0 0 chr5 9994120 9994155 -193091377 + AT_rich Low_complexity Low_complexity 1 35 0 377 68 14 7 chr5 9994161 9994233 -193091299 - MLT2A1 LTR ERVL 0 453 400 181 160 20 20 chr5 9994251 9994301 -193091231 + (TA)n Simple_repeat Simple_repeat 2 51 0 2935 78 5 5 chr5 9994374 9994772 -193090760 - MLT2A1 LTR ERVL -44 400 3 369 252 0 27 chr5 9994831 9994942 -193090590 - L1MC5 LINE L1 -48 7913 7806 243 0 0 0 chr5 9994961 9994988 -193090544 + (CA)n Simple_repeat Simple_repeat 1 27 0 232 279 35 35 chr5 9995204 9995290 -193090242 + L2 LINE L2 3136 3221 -51 403 229 221 0 chr5 9995500 9995640 -193089892 - MER5B DNA MER1_type -1 177 7 616 252 157 34 chr5 9996092 9996597 -193088935 + MLT1E2 LTR MaLR 1 574 -52 288 0 0 0 chr5 9996625 9996657 -193088875 + (TA)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr5 9996656 9996678 -193088854 + (CA)n Simple_repeat Simple_repeat 2 23 0 * 1631 179 26 47 chr5 9996678 9996710 -193088822 - L1MB4 LINE L1 -17 6163 6132 2133 109 0 45 chr5 9996710 9997021 -193088511 - AluSx SINE Alu -13 299 3 1631 179 26 47 chr5 9997021 9997373 -193088159 - L1MB4 LINE L1 -48 6132 5787 254 254 45 0 chr5 9997597 9997664 -193087868 - MIR SINE MIR -104 158 89 1241 81 192 0 chr5 9998073 9998307 -193087225 - L1MA7 LINE L1 0 6291 6013 528 225 47 30 chr5 9998781 9998950 -193086582 - MER5B DNA MER1_type -6 172 1 793 305 105 35 chr5 9999107 9999710 -193085822 + L1ME3A LINE L1 3613 4172 -1974 2292 96 10 0 chr5 9999710 10000002 -193085530 + AluY SINE Alu 1 295 -16 793 305 105 35 chr5 10000002 10000742 -193084790 + L1ME3A LINE L1 4172 5093 -1053 1368 256 73 16 chr5 10000828 10001469 -193084063 + L1ME3A LINE L1 5262 5939 -231 * 4193 182 32 78 chr5 10001467 10001661 -193083871 - L1MB1 LINE L1 -5 6163 5962 2374 128 81 2 chr5 10001661 10002058 -193083474 - MSTC LTR MaLR 0 428 1 4193 182 32 78 chr5 10002058 10002961 -193082571 - L1MB1 LINE L1 -206 5962 5019 1100 95 0 0 chr5 10002961 10003098 -193082434 - AluSc SINE Alu -45 264 128 4193 182 32 78 chr5 10003098 10003695 -193081837 - L1MB1 LINE L1 -1149 5019 4396 2533 69 0 0 chr5 10003695 10003998 -193081534 - AluY SINE Alu -8 303 1 4193 182 32 78 chr5 10003998 10004187 -193081345 - L1MB1 LINE L1 -1772 4396 4259 180 0 0 0 chr5 10004187 10004207 -193081325 + (TG)n Simple_repeat Simple_repeat 1 20 0 4193 182 32 78 chr5 10004207 10004332 -193081200 - L1MB1 LINE L1 -1909 4259 4130 798 227 23 6 chr5 10005909 10006081 -193079451 - MLT1A2 LTR MaLR -184 346 172 698 269 45 25 chr5 10006535 10006983 -193078549 - MER76 LTR ERV -167 521 1 1031 319 92 67 chr5 10008267 10008350 -193077182 + L1M4 LINE L1 2160 2239 -3907 1406 197 100 4 chr5 10008350 10008619 -193076913 + AluJo SINE Alu 1 295 -17 1031 319 92 67 chr5 10008619 10009477 -193076055 + L1M4 LINE L1 2239 3130 -3016 2520 64 3 0 chr5 10009477 10009775 -193075757 - AluY SINE Alu -12 299 1 1031 319 92 67 chr5 10009775 10009824 -193075708 + L1M4 LINE L1 3130 3176 -2970 319 282 77 29 chr5 10011077 10011247 -193074285 - L1M4 LINE L1 -765 5381 5204 2126 134 3 0 chr5 10011461 10011759 -193073773 + AluSq SINE Alu 1 299 -14 2908 182 32 13 chr5 10011768 10012389 -193073143 + L1MB8 LINE L1 5511 6143 -35 236 320 124 0 chr5 10012809 10012906 -193072626 + MIR3 SINE MIR 6 114 -94 2277 106 25 17 chr5 10013471 10013829 -193071703 - THE1C LTR MaLR -2 373 13 2038 92 0 32 chr5 10014886 10015167 -193070365 + AluSx SINE Alu 34 305 -7 504 254 294 13 chr5 10015167 10015535 -193069997 - L2 LINE L2 -1733 1581 1103 336 269 11 0 chr5 10015655 10015748 -193069784 - MER5A DNA MER1_type -83 106 13 1097 273 39 3 chr5 10015978 10016333 -193069199 + MER87 LTR ERV1 174 541 0 259 307 144 20 chr5 10016336 10016538 -193068994 - L2 LINE L2 -2833 481 255 1097 269 70 14 chr5 10017045 10017476 -193068056 - MLT1C LTR MaLR 0 467 13 348 24 0 0 chr5 10017958 10017999 -193067533 + (TG)n Simple_repeat Simple_repeat 2 42 0 890 220 6 0 chr5 10018031 10018213 -193067319 - MLT1A2 LTR MaLR -187 187 5 334 224 0 0 chr5 10019517 10019584 -193065948 + MER20 DNA MER1_type 1 67 -152 2058 191 20 54 chr5 10019609 10019722 -193065810 - L1MB5 LINE L1 0 6174 6059 2364 84 11 0 chr5 10019722 10020009 -193065523 - AluSq SINE Alu -21 292 3 2058 191 20 54 chr5 10020009 10020391 -193065141 - L1MB5 LINE L1 -115 6059 5696 892 183 18 0 chr5 10020398 10020562 -193064970 + MER20 DNA MER1_type 50 216 -3 928 285 171 34 chr5 10020666 10021350 -193064182 + L2 LINE L2 2499 3313 0 1081 109 16 0 chr5 10022507 10022837 -193062695 + (TCCA)n Simple_repeat Simple_repeat 2 513 0 377 319 35 0 chr5 10022849 10022962 -193062570 - L2 LINE L2 -1 3312 3196 361 323 93 0 chr5 10022960 10023121 -193062411 - MIR3 SINE MIR -13 195 20 * 2145 148 32 53 chr5 10023286 10023718 -193061814 - Tigger2a DNA MER2_type -11 423 1 973 214 15 9 chr5 10023784 10024074 -193061458 - MLT2B1 LTR ERVL -164 250 1 2323 102 23 3 chr5 10024435 10024739 -193060793 - AluSx SINE Alu -2 310 1 436 267 125 46 chr5 10026667 10026907 -193058625 + L1MB3 LINE L1 4399 4657 -1489 615 341 41 45 chr5 10027245 10027568 -193057964 + L1MB3 LINE L1 5215 5540 -940 206 61 0 30 chr5 10027568 10027601 -193057931 + (TGGGGG)n Simple_repeat Simple_repeat 4 35 0 615 341 41 45 chr5 10027601 10027775 -193057757 + L1MB3 LINE L1 5540 5713 -767 485 207 17 9 chr5 10027827 10027943 -193057589 + MLT2C1 LTR ERVL 1 117 -280 2627 161 21 2 chr5 10027943 10028415 -193057117 - MER41B LTR ERV1 0 635 155 2458 85 3 0 chr5 10028466 10028771 -193056761 - AluSp SINE Alu -7 306 1 613 193 14 0 chr5 10030396 10030541 -193054991 + GA-rich Low_complexity Low_complexity 3 149 0 1001 105 15 90 chr5 10031268 10031365 -193054167 - MER2 DNA MER2_type -160 185 109 1815 166 14 3 chr5 10031365 10031654 -193053878 - AluJb SINE Alu -20 292 1 1001 105 15 90 chr5 10031654 10031756 -193053776 - MER2 DNA MER2_type -236 109 1 830 321 118 0 chr5 10031794 10032143 -193053389 + MLT1J LTR MaLR 1 390 -121 24 0 0 0 chr5 10034411 10034435 -193051097 + AT_rich Low_complexity Low_complexity 1 24 0 1552 32 0 11 chr5 10034475 10034663 -193050869 - L1PA4 LINE L1 -1 6154 5969 483 182 71 14 chr5 10035264 10035428 -193050104 - MLT2C2 LTR ERVL 0 414 202 1490 170 58 21 chr5 10035490 10035820 -193049712 - MLT2C2 LTR ERVL -122 342 1 280 318 11 0 chr5 10035886 10035974 -193049558 + MIR SINE MIR 94 182 -80 459 296 121 19 chr5 10037181 10037387 -193048145 - L3 LINE CR1 -11 1566 1340 2796 35 0 0 chr5 10037387 10037699 -193047833 - AluYb8 SINE Alu -1 317 6 1108 191 18 0 chr5 10038101 10038326 -193047206 + L1MB3 LINE L1 5744 5972 -211 662 226 0 7 chr5 10038328 10038474 -193047058 + L1MB3 LINE L1 6036 6180 -3 880 225 96 51 chr5 10038947 10039302 -193046230 + MLT1A2 LTR MaLR 4 374 0 235 301 55 33 chr5 10040161 10040344 -193045188 - L1MEd LINE L1 -5903 216 30 480 350 10 10 chr5 10040585 10040779 -193044753 - L3 LINE CR1 -729 848 655 311 366 77 11 chr5 10040920 10041103 -193044429 - L3 LINE CR1 -988 589 395 957 172 6 0 chr5 10042406 10042580 -193042952 - MER53 DNA DNA -13 176 2 1476 236 31 74 chr5 10043089 10043644 -193041888 + MER65B LTR ERV1 1 531 0 2324 98 46 52 chr5 10043908 10044274 -193041258 + THE1B LTR MaLR 1 364 0 816 234 49 16 chr5 10044772 10045016 -193040516 + MER34 LTR ERV1 34 285 -257 1162 218 99 92 chr5 10045016 10045831 -193039701 + MER65B-int LTR ERV1 725 2490 -2381 1567 85 9 9 chr5 10045831 10046055 -193039477 - L1PA10 LINE L1 -1 6167 5944 369 0 0 0 chr5 10046235 10046276 -193039256 + (TA)n Simple_repeat Simple_repeat 2 42 0 2375 108 0 0 chr5 10046276 10046581 -193038951 - AluSq SINE Alu -8 305 1 259 170 30 156 chr5 10046608 10046743 -193038789 + MER65B-int LTR ERV1 1601 1718 -6402 366 277 49 48 chr5 10046877 10047135 -193038397 + MER65B-int LTR ERV1 2944 4195 -1719 437 275 21 47 chr5 10047432 10047625 -193037907 + MER65B-int LTR ERV1 3545 3732 -2866 1479 194 10 14 chr5 10047674 10049230 -193036302 + MER65B-int LTR ERV1 2842 5772 -491 1315 257 81 19 chr5 10049236 10049606 -193035926 + MER65B-int LTR ERV1 3629 4021 -850 2190 110 0 42 chr5 10049928 10049959 -193035573 - AluSq SINE Alu -16 297 266 2444 57 14 7 chr5 10049959 10050255 -193035277 - AluY SINE Alu -13 298 1 2190 110 0 42 chr5 10050255 10050533 -193034999 - AluSq SINE Alu -47 266 1 1251 275 22 6 chr5 10050623 10050987 -193034545 + MER65B-int LTR ERV1 4502 4871 0 1675 236 29 45 chr5 10050987 10051066 -193034466 + MER65B LTR ERV1 1 80 -451 2510 118 47 35 chr5 10051066 10051489 -193034043 + MSTA LTR MaLR 1 428 0 1675 236 29 45 chr5 10051489 10051769 -193033763 + MER65B LTR ERV1 80 352 -179 2066 45 16 0 chr5 10051769 10052013 -193033519 + AluY SINE Alu 62 309 -2 1675 236 29 45 chr5 10052013 10052169 -193033363 + MER65B LTR ERV1 352 509 -22 216 307 98 42 chr5 10052238 10052637 -193032895 - L2 LINE L2 -203 3110 2647 1973 153 124 3 chr5 10054026 10054404 -193031128 - MSTA LTR MaLR -4 424 1 587 238 131 0 chr5 10054440 10054600 -193030932 - MLT1D LTR MaLR 0 505 325 741 223 60 30 chr5 10054641 10054874 -193030658 - MLT1D LTR MaLR -258 247 8 183 42 0 0 chr5 10054952 10054976 -193030556 + (GGCTG)n Simple_repeat Simple_repeat 1 24 0 1015 234 52 101 chr5 10057222 10057706 -193027826 + MLT1C LTR MaLR 6 465 -2 225 259 0 0 chr5 10057860 10057914 -193027618 - MLT1E3 LTR MaLR -17 607 554 2297 88 3 3 chr5 10057915 10058222 -193027310 + L1PB1 LINE L1 5843 6149 -2 1383 220 79 86 chr5 10058231 10058803 -193026729 - MLT1E1 LTR MaLR -24 630 63 614 289 87 24 chr5 10059347 10059645 -193025887 + L1MC4a LINE L1 5578 5894 -1914 2200 138 33 33 chr5 10060244 10060606 -193024926 + THE1B LTR MaLR 3 364 0 1074 183 0 11 chr5 10062380 10062566 -193022966 - AluJb SINE Alu -10 302 119 1695 191 13 34 chr5 10062570 10062940 -193022592 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 10063059 10063089 -193022443 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2555 65 10 0 chr5 10063828 10064136 -193021396 - AluY SINE Alu 0 311 1 2396 97 0 3 chr5 10064138 10064438 -193021094 - AluSg SINE Alu -11 299 1 527 245 82 55 chr5 10064643 10064900 -193020632 - LTR37B LTR ERV1 -64 404 141 540 219 48 37 chr5 10065612 10065799 -193019733 + MER53 DNA DNA 1 189 0 401 223 18 9 chr5 10066028 10066140 -193019392 - MER89 LTR ERV1 0 559 447 634 192 41 7 chr5 10066514 10066660 -193018872 + MER20 DNA MER1_type 3 153 -66 487 240 76 55 chr5 10067109 10067384 -193018148 - MLT2F LTR ERVL -149 514 234 235 299 39 24 chr5 10067418 10067545 -193017987 - MLT2F LTR ERVL -533 130 2 504 106 0 64 chr5 10067800 10067894 -193017638 + FLAM_C SINE Alu 56 143 0 728 169 29 0 chr5 10068047 10068219 -193017313 + CT-rich Low_complexity Low_complexity 4 180 0 970 320 77 68 chr5 10068544 10069417 -193016115 + L1M4 LINE L1 2246 3129 -3017 2560 60 3 0 chr5 10069417 10069717 -193015815 - AluY SINE Alu -10 301 1 970 320 77 68 chr5 10069717 10069766 -193015766 + L1M4 LINE L1 3129 3176 -2970 234 0 0 0 chr5 10070451 10070477 -193015055 + (TG)n Simple_repeat Simple_repeat 2 27 0 1430 160 9 4 chr5 10070504 10070735 -193014797 + AluSg/x SINE Alu 65 296 -14 182 191 0 32 chr5 10070815 10070878 -193014654 + CT-rich Low_complexity Low_complexity 4 64 0 184 246 290 14 chr5 10071350 10071488 -193014044 + MER5B DNA MER1_type 3 178 0 473 245 64 56 chr5 10071855 10072058 -193013474 + MIR SINE MIR 3 207 -55 502 283 83 86 chr5 10072228 10072649 -193012883 - L2 LINE L2 -5 3267 2848 189 281 104 21 chr5 10072781 10072877 -193012655 + MIR3 SINE MIR 77 180 -28 453 320 172 24 chr5 10075735 10076113 -193009419 + L1M4 LINE L1 4399 4832 -1314 434 341 155 17 chr5 10077986 10078347 -193007185 + L2 LINE L2 2555 2965 -349 3212 207 47 5 chr5 10079003 10079896 -193005636 - L1 LINE L1 -2583 3563 2633 1449 168 47 7 chr5 10080186 10080483 -193005049 + L1PB3 LINE L1 5845 6153 -1 5395 144 41 3 chr5 10083522 10085021 -193000511 - L1PB3 LINE L1 0 6154 4601 249 180 0 0 chr5 10087385 10087435 -192998097 + (TATG)n Simple_repeat Simple_repeat 2 51 0 4061 213 54 16 chr5 10087514 10089281 -192996251 - L1P LINE L1 -3638 3159 1326 2103 242 3 45 chr5 10089284 10089909 -192995623 + L1P LINE L1 3152 3750 -3047 1252 89 187 0 chr5 10090123 10090358 -192995174 + L1MA7 LINE L1 6013 6291 0 241 269 45 0 chr5 10090763 10090830 -192994702 + MIR SINE MIR 89 158 -104 1755 179 32 17 chr5 10091055 10091402 -192994130 + L1MB3 LINE L1 5788 6139 -44 2034 105 0 45 chr5 10091407 10091720 -192993812 + AluSx SINE Alu 3 301 -11 423 0 0 0 chr5 10091753 10091800 -192993732 + (TG)n Simple_repeat Simple_repeat 2 48 0 207 325 0 0 chr5 10092069 10092152 -192993380 + A-rich Low_complexity Low_complexity 1 83 0 236 259 0 0 chr5 10092501 10092555 -192992977 - MLT1E3 LTR MaLR -17 607 554 2290 86 3 3 chr5 10092556 10092860 -192992672 + L1PB1 LINE L1 5843 6146 -5 1605 213 79 86 chr5 10092872 10093444 -192992088 - MLT1E1 LTR MaLR -24 630 63 1158 133 4 4 chr5 10094996 10095239 -192990293 + (TCCA)n Simple_repeat Simple_repeat 1 243 0 700 123 0 15 chr5 10095252 10095382 -192990150 + (TCCA)n Simple_repeat Simple_repeat 2 129 0 533 171 7 110 chr5 10096078 10096146 -192989386 - MLT1C LTR MaLR 0 467 394 1718 94 109 8 chr5 10096146 10096402 -192989130 + AluSc SINE Alu 1 282 -27 206 32 32 0 chr5 10096407 10096438 -192989094 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 533 171 7 110 chr5 10096438 10096509 -192989023 - MLT1C LTR MaLR -77 390 337 2102 129 67 14 chr5 10098234 10098590 -192986942 - THE1C LTR MaLR 0 375 1 256 228 18 0 chr5 10102052 10102109 -192983423 - MIR SINE MIR -69 139 82 1724 140 20 3 chr5 10107152 10107445 -192978087 - AluJo SINE Alu -3 309 12 1593 169 23 36 chr5 10107774 10108082 -192977450 - AluJo SINE Alu -8 304 1 189 74 0 0 chr5 10109481 10109508 -192976024 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 971 216 53 0 chr5 10109632 10109840 -192975692 - MER20 DNA MER1_type 0 219 1 262 369 110 28 chr5 10109886 10110203 -192975329 - L2 LINE L2 -1 3271 2929 326 91 18 0 chr5 10110243 10110298 -192975234 + (TG)n Simple_repeat Simple_repeat 2 57 0 837 266 19 9 chr5 10110332 10110546 -192974986 + MIR SINE MIR 47 262 0 329 354 0 19 chr5 10111406 10111567 -192973965 + (TG)n Simple_repeat Simple_repeat 1 158 0 2175 105 0 10 chr5 10113139 10113443 -192972089 - AluSx SINE Alu -11 301 1 554 243 36 0 chr5 10113855 10113995 -192971537 - MER20 DNA MER1_type -68 151 7 1500 228 85 7 chr5 10114256 10114681 -192970851 - MLT1C LTR MaLR -4 463 6 485 327 23 32 chr5 10116202 10116419 -192969113 - MIR SINE MIR -32 230 16 243 328 113 41 chr5 10121569 10121764 -192963768 - MIR SINE MIR -32 230 22 210 333 114 40 chr5 10121971 10122172 -192963360 - MIR SINE MIR -26 236 21 384 148 59 2 chr5 10123049 10123138 -192962394 + MLT1J2 LTR MaLR 68 141 -309 435 373 97 35 chr5 10123368 10124164 -192961368 + L1ME LINE L1 4657 5512 -764 1480 231 73 31 chr5 10124832 10125375 -192960157 + MLT1F1 LTR MaLR 1 566 -1 448 246 62 61 chr5 10125626 10125792 -192959740 + L1ME LINE L1 5495 5666 -455 195 184 0 0 chr5 10126052 10126090 -192959442 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 322 0 78 chr5 10126701 10126791 -192958741 + L3 LINE CR1 356 438 -1139 310 267 0 40 chr5 10126991 10127092 -192958440 - L1MC4 LINE L1 -1338 6704 6608 262 219 42 0 chr5 10127132 10127228 -192958304 + (TA)n Simple_repeat Simple_repeat 1 100 0 1771 171 45 19 chr5 10128957 10129331 -192956201 + MLT1B LTR MaLR 4 387 -3 237 111 0 63 chr5 10129373 10129436 -192956096 + (GGGA)n Simple_repeat Simple_repeat 2 60 0 269 326 0 0 chr5 10130512 10130598 -192954934 + GA-rich Low_complexity Low_complexity 1 86 0 1931 144 3 0 chr5 10131307 10131606 -192953926 + AluSx SINE Alu 7 306 -6 832 88 0 18 chr5 10132499 10132613 -192952919 + AluSp/q SINE Alu 185 296 -17 2464 53 0 0 chr5 10132661 10132989 -192952543 + AluY SINE Alu 1 328 0 1553 216 71 38 chr5 10136626 10137074 -192948458 + Charlie4a DNA MER1_type 4 466 -42 474 291 7 0 chr5 10138880 10139021 -192946511 + MIR SINE MIR 102 243 -19 412 276 41 29 chr5 10140889 10141059 -192944473 + MER5B DNA MER1_type 7 178 0 1771 133 14 30 chr5 10142037 10142377 -192943155 + MLT1B LTR MaLR 1 390 0 1946 141 7 7 chr5 10142405 10142695 -192942837 + AluJo SINE Alu 1 290 -22 243 152 0 0 chr5 10142843 10142889 -192942643 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr5 10144228 10144253 -192941279 + AT_rich Low_complexity Low_complexity 1 25 0 250 303 9 28 chr5 10145342 10145451 -192940081 + MIR3 SINE MIR 102 208 0 326 330 0 58 chr5 10146830 10147021 -192938511 + G-rich Low_complexity Low_complexity 1 180 0 24 0 0 0 chr5 10147264 10147288 -192938244 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 10147302 10147330 -192938202 + GC_rich Low_complexity Low_complexity 1 28 0 38 68 0 0 chr5 10147728 10147801 -192937731 + GC_rich Low_complexity Low_complexity 1 73 0 194 0 0 37 chr5 10147849 10147876 -192937656 + (CGAA)n Simple_repeat Simple_repeat 4 29 0 1083 139 0 0 chr5 10148213 10148393 -192937139 + (TTC)n Simple_repeat Simple_repeat 1 180 0 764 224 11 38 chr5 10148447 10148630 -192936902 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 10149204 10149578 -192935954 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 10150314 10150449 -192935083 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 10150540 10150753 -192934779 + L1MC1 LINE L1 3895 4111 -2035 363 205 18 36 chr5 10151519 10151749 -192933783 + (TATAA)n Simple_repeat Simple_repeat 1 225 0 228 217 29 0 chr5 10151722 10151791 -192933741 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 10151820 10151857 -192933675 + AT_rich Low_complexity Low_complexity 1 37 0 5340 204 15 16 chr5 10152052 10153055 -192932477 + L1MC1 LINE L1 4819 5821 -512 375 23 0 0 chr5 10153055 10153099 -192932433 + (CA)n Simple_repeat Simple_repeat 1 44 0 5340 204 15 16 chr5 10153099 10153247 -192932285 + L1MC1 LINE L1 5821 5968 -365 2044 149 3 0 chr5 10153247 10153556 -192931976 + AluSx SINE Alu 1 310 -2 5340 204 15 16 chr5 10153556 10153920 -192931612 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 10154004 10154127 -192931405 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 10154127 10154431 -192931101 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 10154431 10154507 -192931025 + MIR SINE MIR 184 262 0 2085 124 25 0 chr5 10155315 10155597 -192929935 + AluSg SINE Alu 5 293 -17 210 118 0 0 chr5 10156066 10156100 -192929432 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 10156101 10156232 -192929300 + L1ME4a LINE L1 5947 6091 -30 202 146 0 24 chr5 10156857 10156898 -192928634 + (TA)n Simple_repeat Simple_repeat 1 40 0 1456 95 21 45 chr5 10157037 10157280 -192928252 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 10158622 10158659 -192926873 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 10158831 10158918 -192926614 + MIR SINE MIR 52 154 -108 816 267 42 14 chr5 10159861 10160208 -192925324 + L1ME LINE L1 524 873 -5197 680 191 58 143 chr5 10162249 10162393 -192923139 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 10162393 10162756 -192922776 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 10162756 10162904 -192922628 - MLT1B LTR MaLR -230 160 1 327 165 22 11 chr5 10163484 10163575 -192921957 + (CA)n Simple_repeat Simple_repeat 2 93 0 535 299 58 17 chr5 10163938 10164179 -192921353 - LTR16C LTR ERVL -94 397 147 1297 163 0 5 chr5 10164256 10164465 -192921067 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 10164479 10164516 -192921016 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 10164751 10165302 -192920230 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 10166229 10166288 -192919244 + L2 LINE L2 3249 3308 -5 1937 103 107 7 chr5 10169569 10169850 -192915682 + AluSx SINE Alu 1 309 -3 766 235 6 0 chr5 10170732 10170894 -192914638 - MLT1E2 LTR MaLR -6 499 337 1162 249 24 42 chr5 10170944 10171322 -192914210 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 10171339 10171675 -192913857 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 10172078 10172231 -192913301 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 10172454 10172561 -192912971 + MER50 LTR ERV1 497 604 -130 908 249 128 21 chr5 10175019 10175348 -192910184 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 10175468 10175576 -192909956 - MLT2C2 LTR ERVL -357 107 1 1453 237 58 17 chr5 10176330 10176747 -192908785 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 10176759 10176941 -192908591 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 10177728 10178021 -192907511 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 10178542 10178579 -192906953 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 10178593 10178695 -192906837 + MIR3 SINE MIR 86 185 -23 407 339 5 16 chr5 10179508 10179700 -192905832 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 10180370 10180437 -192905095 + CT-rich Low_complexity Low_complexity 2 68 0 669 145 51 0 chr5 10182249 10182387 -192903145 + L1MA5 LINE L1 6155 6299 -1 2946 143 65 6 chr5 10182530 10183020 -192902512 - LTR44 LTR ERV1 0 519 1 3055 77 10 2 chr5 10183187 10183588 -192901944 + MLT2A1 LTR ERVL 1 404 -40 326 132 38 0 chr5 10183597 10183650 -192901882 + L1MC4 LINE L1 6649 6703 -1339 231 133 0 0 chr5 10183664 10183709 -192901823 + (TA)n Simple_repeat Simple_repeat 2 46 0 362 253 48 0 chr5 10183718 10183801 -192901731 + L1MC4 LINE L1 6614 6700 -1342 256 85 149 0 chr5 10183802 10183849 -192901683 + MLT2A1 LTR ERVL 391 444 0 306 78 39 0 chr5 10183849 10183900 -192901632 + MLT2A1 LTR ERVL 348 400 -44 213 182 0 0 chr5 10183900 10183933 -192901599 + (TG)n Simple_repeat Simple_repeat 1 33 0 361 270 44 20 chr5 10183933 10184121 -192901411 + L1MC4 LINE L1 6532 6703 -1139 256 85 149 0 chr5 10184122 10184169 -192901363 + MLT2A1 LTR ERVL 391 444 0 430 100 213 0 chr5 10184169 10184209 -192901323 + MLT2A1 LTR ERVL 348 378 -66 228 67 0 0 chr5 10184209 10184239 -192901293 + (TA)n Simple_repeat Simple_repeat 2 31 0 430 100 213 0 chr5 10184239 10184278 -192901254 + MLT2A1 LTR ERVL 378 444 0 294 95 0 0 chr5 10184755 10184797 -192900735 + (TG)n Simple_repeat Simple_repeat 1 42 0 315 49 0 0 chr5 10185256 10185297 -192900235 + (TG)n Simple_repeat Simple_repeat 1 41 0 1542 113 8 8 chr5 10185504 10185743 -192899789 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 10186013 10186037 -192899495 + AT_rich Low_complexity Low_complexity 1 24 0 1398 122 15 5 chr5 10186079 10186284 -192899248 - MER57B LTR ERV1 -227 207 1 1704 196 60 3 chr5 10186494 10186811 -192898721 + MLT1A1 LTR MaLR 9 343 -22 557 144 33 0 chr5 10186978 10187068 -192898464 + FLAM_A SINE Alu 32 124 -18 2222 106 6 3 chr5 10188176 10188487 -192897045 - AluSx SINE Alu 0 312 1 389 65 0 81 chr5 10189605 10189645 -192895887 - MLT2B1 LTR ERVL 0 520 485 990 125 0 0 chr5 10189645 10189821 -192895711 + (TA)n Simple_repeat Simple_repeat 2 177 0 389 65 0 81 chr5 10189821 10189842 -192895690 - MLT2B1 LTR ERVL -35 485 464 440 249 18 30 chr5 10189853 10190069 -192895463 + L1MC4 LINE L1 6538 6703 -1139 334 356 0 0 chr5 10189959 10190074 -192895458 - L1MC4 LINE L1 -1339 6703 6589 * 438 223 0 43 chr5 10190073 10190167 -192895365 + L1MC4 LINE L1 6614 6703 -1339 359 306 90 15 chr5 10190145 10190279 -192895253 - L1MC4 LINE L1 -1337 6705 6562 * 1549 234 105 18 chr5 10192408 10192866 -192892666 - MLT1D LTR MaLR 0 505 8 423 255 56 87 chr5 10192892 10193123 -192892409 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 10193778 10193801 -192891731 + AT_rich Low_complexity Low_complexity 1 23 0 1999 113 0 3 chr5 10194414 10194757 -192890775 + AluSx SINE Alu 1 342 0 224 269 10 0 chr5 10194952 10195056 -192890476 + (TG)n Simple_repeat Simple_repeat 2 106 0 847 239 50 18 chr5 10195404 10195622 -192889910 - MLT1B LTR MaLR 0 390 166 436 189 7 28 chr5 10195624 10195767 -192889765 + CT-rich Low_complexity Low_complexity 1 140 0 755 57 9 0 chr5 10195895 10196000 -192889532 + (TTC)n Simple_repeat Simple_repeat 1 106 0 677 94 48 27 chr5 10196100 10196626 -192888906 + (TG)n Simple_repeat Simple_repeat 1 537 0 795 48 59 12 chr5 10196646 10197041 -192888491 + (TG)n Simple_repeat Simple_repeat 1 413 0 257 50 0 25 chr5 10197583 10197623 -192887909 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 220 281 116 42 chr5 10197728 10197911 -192887621 - MIR SINE MIR -48 160 17 1818 114 0 43 chr5 10198264 10198603 -192886929 + AluSx SINE Alu 14 340 0 430 215 145 50 chr5 10198728 10198970 -192886562 + L1ME4a LINE L1 5720 5984 -137 782 306 31 5 chr5 10200031 10200253 -192885279 - MIR SINE MIR -22 240 13 218 306 74 25 chr5 10200487 10200608 -192884924 - MIR3 SINE MIR -52 156 30 229 299 0 26 chr5 10200655 10200732 -192884800 + G-rich Low_complexity Low_complexity 1 75 0 1066 243 125 33 chr5 10200850 10201293 -192884239 + MLT1G3 LTR MaLR 4 469 -61 6257 134 19 6 chr5 10201341 10203144 -192882388 + L1PA14 LINE L1 4144 6050 -111 2629 99 0 25 chr5 10203144 10203508 -192882024 + THE1A LTR MaLR 1 355 0 6257 134 19 6 chr5 10203508 10203620 -192881912 + L1PA14 LINE L1 6050 6159 -2 310 233 0 14 chr5 10203622 10203695 -192881837 + MLT1G3 LTR MaLR 496 567 0 655 248 125 80 chr5 10203719 10204159 -192881373 + LTR67 LTR ERVL 98 557 0 252 301 96 20 chr5 10204351 10204497 -192881035 + MER117 DNA MER1_type 4 160 -37 368 274 226 12 chr5 10204794 10204958 -192880574 - MLT1J LTR MaLR -312 199 1 293 374 20 20 chr5 10205413 10205616 -192879916 - ERVL LTR ERVL -5133 631 429 29 0 0 0 chr5 10205727 10205756 -192879776 + AT_rich Low_complexity Low_complexity 1 29 0 2002 101 0 14 chr5 10206173 10206449 -192879083 + AluSx SINE Alu 1 272 -40 25 31 0 0 chr5 10206467 10206499 -192879033 + AT_rich Low_complexity Low_complexity 1 32 0 866 142 64 0 chr5 10206509 10206650 -192878882 - FRAM SINE Alu -30 146 1 1992 128 0 10 chr5 10207534 10207832 -192877700 + AluSx SINE Alu 1 295 -17 2419 222 30 29 chr5 10207856 10208481 -192877051 - L1ME2 LINE L1 -4 6160 5535 285 29 0 0 chr5 10208905 10208939 -192876593 + (GA)n Simple_repeat Simple_repeat 1 34 0 2192 101 0 0 chr5 10210468 10210764 -192874768 + AluSx SINE Alu 1 296 -16 1096 178 6 10 chr5 10212096 10212438 -192873094 + MLT1B LTR MaLR 1 390 0 185 300 67 33 chr5 10212966 10213086 -192872446 + L2 LINE L2 3171 3294 -19 5259 130 19 50 chr5 10213923 10214374 -192871158 + L1MA5A LINE L1 5375 5838 -459 1746 117 0 4 chr5 10214374 10214631 -192870901 + AluSx SINE Alu 39 294 -18 5259 130 19 50 chr5 10214631 10214886 -192870646 + L1MA5A LINE L1 5838 6047 -250 2030 143 18 21 chr5 10214886 10215221 -192870311 - MER1B DNA MER1_type 0 337 4 5259 130 19 50 chr5 10215221 10215460 -192870072 + L1MA5A LINE L1 6047 6292 -5 276 200 0 0 chr5 10215618 10215678 -192869854 + CT-rich Low_complexity Low_complexity 2 61 0 260 253 126 0 chr5 10216175 10216262 -192869270 + MIR SINE MIR 93 190 -72 986 243 9 0 chr5 10216388 10216598 -192868934 - MER20 DNA MER1_type -6 213 2 742 175 139 0 chr5 10216717 10216854 -192868678 - AluJb SINE Alu -126 186 31 1982 128 3 0 chr5 10217122 10217419 -192868113 - AluSx SINE Alu -14 298 1 265 279 0 0 chr5 10217478 10217546 -192867986 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 328 266 40 102 chr5 10217573 10217750 -192867782 + L1MC4 LINE L1 6539 6704 -1338 1681 172 0 0 chr5 10217956 10218265 -192867267 - AluJo SINE Alu 0 313 5 763 119 23 28 chr5 10219202 10219378 -192866154 + GA-rich Low_complexity Low_complexity 2 176 0 218 217 0 17 chr5 10219404 10219464 -192866068 + GA-rich Low_complexity Low_complexity 3 61 0 259 254 79 79 chr5 10219511 10219676 -192865856 + MER5B DNA MER1_type 7 171 -7 1896 102 0 38 chr5 10220873 10221210 -192864322 + AluY SINE Alu 1 326 0 1914 117 14 0 chr5 10221283 10221565 -192863967 - AluSc SINE Alu -15 294 9 210 37 0 0 chr5 10221576 10221603 -192863929 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 * 728 119 8 0 chr5 10221597 10221715 -192863817 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 995 208 55 128 chr5 10221847 10222177 -192863355 - MLT1C LTR MaLR -5 462 178 2180 101 10 0 chr5 10222177 10222483 -192863049 - AluSc SINE Alu 0 309 1 995 208 55 128 chr5 10222483 10222643 -192862889 - MLT1C LTR MaLR -289 178 8 1469 166 28 110 chr5 10223729 10224156 -192861376 + MLT1B LTR MaLR 1 505 0 207 0 0 0 chr5 10225015 10225038 -192860494 + (GGGTG)n Simple_repeat Simple_repeat 2 24 0 306 145 24 76 chr5 10225040 10225158 -192860374 - MER20 DNA MER1_type -62 157 5 200 293 40 13 chr5 10225737 10225812 -192859720 - L3 LINE CR1 -1041 536 460 1594 141 23 19 chr5 10226096 10226359 -192859173 - MER1B DNA MER1_type -2 337 74 513 118 0 0 chr5 10226359 10226427 -192859105 - MER1B DNA MER1_type -156 141 74 744 128 105 45 chr5 10226427 10226560 -192858972 - MER1B DNA MER1_type -156 141 1 209 256 0 0 chr5 10227231 10227274 -192858258 - MIR SINE MIR -80 128 86 207 273 91 23 chr5 10227300 10227388 -192858144 - MIR SINE MIR -80 128 35 525 182 20 0 chr5 10228730 10228829 -192856703 + MLT2C1 LTR ERVL 4 104 -293 1272 209 147 34 chr5 10228834 10229241 -192856291 + MLT1C LTR MaLR 6 458 -9 200 282 55 55 chr5 10229297 10229407 -192856125 + MIR SINE MIR 14 123 -139 192 135 0 0 chr5 10229719 10229756 -192855776 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 1261 159 25 107 chr5 10229925 10230252 -192855280 + AluYb8 SINE Alu 1 300 -18 21 0 0 0 chr5 10230260 10230281 -192855251 + AT_rich Low_complexity Low_complexity 1 21 0 866 264 47 12 chr5 10230309 10230653 -192854879 + L1MC4 LINE L1 7687 8042 0 21 0 0 0 chr5 10230667 10230688 -192854844 + AT_rich Low_complexity Low_complexity 1 21 0 256 267 95 95 chr5 10231316 10231537 -192853995 - L2 LINE L2 -38 3234 3014 390 312 40 40 chr5 10232369 10232542 -192852990 + MER5B DNA MER1_type 1 173 -5 676 228 17 6 chr5 10232580 10232760 -192852772 - MER5A DNA MER1_type -4 185 4 185 195 0 24 chr5 10233863 10233904 -192851628 + L2 LINE L2 128 167 -3147 378 162 0 0 chr5 10234486 10234554 -192850978 - L1MD3 LINE L1 0 7995 7928 1937 206 63 20 chr5 10234638 10234820 -192850712 - L1MD3 LINE L1 -70 7925 7752 1305 199 15 103 chr5 10234820 10235218 -192850314 - MLT1A1 LTR MaLR -2 363 1 1937 206 63 20 chr5 10235218 10235524 -192850008 - L1MD3 LINE L1 -243 7752 7416 320 193 0 60 chr5 10235524 10235607 -192849925 - MLT1F1 LTR MaLR -435 132 55 213 20 0 102 chr5 10238165 10238214 -192847318 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 261 327 26 9 chr5 10238294 10238407 -192847125 - MIR3 SINE MIR -4 204 90 1968 114 3 20 chr5 10238818 10239116 -192846416 + AluSx SINE Alu 1 293 -19 869 148 49 12 chr5 10239179 10239341 -192846191 - FRAM SINE Alu -11 165 1 320 331 79 16 chr5 10239981 10240108 -192845424 + MIR3 SINE MIR 66 200 -8 1258 232 30 46 chr5 10240465 10240835 -192844697 + MLT1A1 LTR MaLR 1 364 -1 345 259 22 45 chr5 10240873 10240995 -192844537 + MIR3 SINE MIR 66 187 -21 1102 308 139 35 chr5 10241654 10242923 -192842609 + HAL1 LINE L1 753 2153 -354 304 342 40 27 chr5 10243129 10243351 -192842181 + HAL1 LINE L1 2246 2470 -37 231 257 0 0 chr5 10243848 10243949 -192841583 + (CA)n Simple_repeat Simple_repeat 2 102 0 274 196 0 0 chr5 10244761 10244817 -192840715 + L1MC4 LINE L1 6648 6703 -1339 186 189 0 0 chr5 10244825 10244862 -192840670 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 279 239 57 34 chr5 10245160 10245248 -192840284 - MLT1I LTR MaLR -130 279 190 997 238 124 46 chr5 10245979 10246391 -192839141 - MLT1C LTR MaLR -2 465 22 334 263 91 0 chr5 10246554 10246653 -192838879 + MIR SINE MIR 86 193 -69 517 109 42 30 chr5 10246772 10247039 -192838493 + (CA)n Simple_repeat Simple_repeat 1 270 0 233 29 0 29 chr5 10248562 10248597 -192836935 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 298 62 0 0 chr5 10248699 10248747 -192836785 - L1MA7 LINE L1 0 6291 6244 3542 109 35 7 chr5 10248749 10249288 -192836244 + MER41A LTR ERV1 1 554 0 291 119 0 0 chr5 10249288 10249330 -192836202 - L1M2 LINE L1 -604 5687 5646 629 101 10 20 chr5 10249330 10249429 -192836103 + MER4A LTR ERV1 1 98 -566 1890 135 3 33 chr5 10249429 10249785 -192835747 + MER4A LTR ERV1 261 664 0 2029 162 31 0 chr5 10249786 10250144 -192835388 - L1M2 LINE L1 -643 5648 5280 209 224 0 17 chr5 10250173 10250231 -192835301 + T-rich Low_complexity Low_complexity 4 60 0 2069 113 20 0 chr5 10250460 10250752 -192834780 - AluSx SINE Alu -14 298 1 214 196 36 89 chr5 10250909 10250965 -192834567 - MIR3 SINE MIR -20 188 136 483 260 68 56 chr5 10252326 10252406 -192833126 - MER46C DNA MER2_type -5 333 255 1955 164 72 18 chr5 10252406 10252795 -192832737 + MLT2D LTR ERVL 1 410 -4 483 260 68 56 chr5 10252795 10252964 -192832568 - MER46C DNA MER2_type -83 255 81 230 220 40 0 chr5 10253865 10253915 -192831617 + MLT1I LTR MaLR 228 279 -130 1677 191 34 96 chr5 10255003 10255147 -192830385 + MLT1D LTR MaLR 3 154 -351 1695 167 141 26 chr5 10255147 10255531 -192830001 - MSTA LTR MaLR 0 428 1 1677 191 34 96 chr5 10255531 10255916 -192829616 + MLT1D LTR MaLR 154 499 -6 203 246 271 16 chr5 10256203 10256325 -192829207 - L2 LINE L2 -3 3269 3117 824 265 28 14 chr5 10256557 10256772 -192828760 - MIR SINE MIR -44 218 1 719 187 99 33 chr5 10256933 10257115 -192828417 - MER3 DNA MER1_type -5 204 11 2404 118 24 21 chr5 10257280 10257654 -192827878 - THE1C LTR MaLR 0 375 1 182 348 0 0 chr5 10258449 10258495 -192827037 - L2 LINE L2 -17 3255 3210 1608 240 49 3 chr5 10258544 10258911 -192826621 - LTR39 LTR ERV1 0 783 400 365 98 43 174 chr5 10258911 10259003 -192826529 - MADE1 DNA Mariner 0 80 1 * 2271 179 33 0 chr5 10259003 10259391 -192826141 - LTR39 LTR ERV1 -382 401 1 2703 3 0 13 chr5 10259579 10259891 -192825641 - AluYa5 SINE Alu -3 308 1 322 303 79 20 chr5 10260137 10260289 -192825243 + MIR SINE MIR 90 250 -12 351 0 0 0 chr5 10260290 10260329 -192825203 + (CAT)n Simple_repeat Simple_repeat 1 39 0 823 269 83 74 chr5 10260347 10260804 -192824728 + LTR16B LTR ERVL 1 461 -3 212 0 36 0 chr5 10261425 10261453 -192824079 + (CAA)n Simple_repeat Simple_repeat 2 30 0 315 150 0 0 chr5 10261983 10262043 -192823489 + (CAT)n Simple_repeat Simple_repeat 3 62 0 2300 85 0 3 chr5 10262645 10262950 -192822582 - AluSc SINE Alu -5 304 1 1274 221 39 13 chr5 10263182 10263490 -192822042 + MLT1C LTR MaLR 1 316 -151 502 272 37 88 chr5 10263543 10263642 -192821890 - L1M4 LINE L1 -2098 4048 3945 189 94 0 0 chr5 10263648 10263680 -192821852 + (TTTAA)n Simple_repeat Simple_repeat 4 35 0 2097 95 3 0 chr5 10263680 10263958 -192821574 - AluSc SINE Alu -27 282 1 502 272 37 88 chr5 10263958 10264130 -192821402 - L1M4 LINE L1 -2201 3945 3791 1765 118 44 36 chr5 10264182 10264707 -192820825 + MER4A LTR ERV1 1 663 -1 562 254 157 14 chr5 10264707 10264985 -192820547 + MLT1G1 LTR MaLR 27 344 -251 680 252 19 0 chr5 10265014 10265173 -192820359 + MLT1G1 LTR MaLR 429 590 -5 463 280 118 40 chr5 10265187 10265712 -192819820 - L1M4 LINE L1 -2385 3761 3196 434 213 0 21 chr5 10265995 10266089 -192819443 + MER94 DNA DNA 1 92 -42 685 319 91 45 chr5 10266120 10266678 -192818854 - L1M4 LINE L1 -3252 2894 2311 410 201 72 86 chr5 10267505 10267644 -192817888 - L2 LINE L2 -24 3289 3153 200 265 193 12 chr5 10268078 10268161 -192817371 - MIR SINE MIR -115 147 50 270 309 90 71 chr5 10270899 10271310 -192814222 + L2 LINE L2 2830 3248 -24 226 284 63 0 chr5 10272933 10273028 -192812504 - MER5A DNA MER1_type -80 109 9 218 317 81 32 chr5 10273074 10273197 -192812335 + MER5A DNA MER1_type 35 163 -26 1579 205 39 55 chr5 10273213 10273598 -192811934 - MLT1B LTR MaLR -11 379 1 321 248 341 0 chr5 10275340 10275469 -192810063 - MIR SINE MIR -30 232 60 1755 153 6 32 chr5 10276205 10276518 -192809014 - AluJo SINE Alu -5 307 3 246 285 58 44 chr5 10276642 10276779 -192808753 + L1MC/D LINE L1 5711 5849 -1959 184 338 38 0 chr5 10276867 10276947 -192808585 + MER5A DNA MER1_type 7 89 -100 221 333 151 34 chr5 10276968 10277319 -192808213 + L2 LINE L2 2092 2483 -831 321 389 65 44 chr5 10277451 10277744 -192807788 + L2 LINE L2 2972 3270 -2 315 0 0 0 chr5 10279890 10279925 -192805607 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 58 39 0 chr5 10280060 10280112 -192805420 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 7326 18 0 0 chr5 10280112 10280933 -192804599 - L1PA2 LINE L1 -16 6139 5319 1181 255 56 36 chr5 10280933 10281325 -192804207 + MLT1C LTR MaLR 68 467 0 675 230 49 97 chr5 10283112 10283460 -192802072 - MLT1J LTR MaLR -64 447 81 309 190 88 36 chr5 10283497 10283634 -192801898 + (CAGAGA)n Simple_repeat Simple_repeat 6 149 0 1450 191 50 0 chr5 10286172 10286450 -192799082 - Tigger3b DNA MER2_type 0 1232 941 1414 60 5 0 chr5 10286450 10286634 -192798898 - L1PA8A LINE L1 -266 5865 5681 554 77 0 0 chr5 10286634 10286704 -192798828 + L1PA8 LINE L1 6094 6171 -1 4816 113 39 95 chr5 10286705 10287707 -192797825 - Tigger3b DNA MER2_type -284 947 2 1712 188 58 80 chr5 10288161 10288677 -192796855 + MLT1D LTR MaLR 1 505 0 383 360 77 31 chr5 10290098 10290618 -192794914 + L2 LINE L2 724 1267 -2047 219 210 43 70 chr5 10290773 10290845 -192794687 - MER5B DNA MER1_type -56 128 61 237 239 0 14 chr5 10290882 10290953 -192794579 - MLT1B LTR MaLR 0 390 321 590 119 0 12 chr5 10290954 10291038 -192794494 - AluS SINE Alu -229 84 2 633 248 135 66 chr5 10291041 10291431 -192794101 - MLT1D LTR MaLR -59 408 1 1496 293 119 21 chr5 10291432 10292477 -192793055 - L1ME3A LINE L1 -28 6142 4964 282 269 141 60 chr5 10295333 10295482 -192790050 - MIR3 SINE MIR -15 193 33 1190 229 28 76 chr5 10295917 10296388 -192789144 + MLT1C LTR MaLR 3 450 -17 472 111 0 0 chr5 10296840 10296903 -192788629 - AluSc SINE Alu -92 217 155 254 86 0 0 chr5 10296903 10296938 -192788594 + 5S rRNA rRNA 62 96 -25 182 289 41 66 chr5 10297554 10297675 -192787857 - L2 LINE L2 -815 2499 2382 326 195 13 0 chr5 10297965 10298042 -192787490 + CT-rich Low_complexity Low_complexity 1 78 0 255 61 0 0 chr5 10298050 10298083 -192787449 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 477 241 85 51 chr5 10299301 10299498 -192786034 - MIR SINE MIR -39 223 15 471 188 6 0 chr5 10300579 10300672 -192784860 - Tigger4(Zombi) DNA MER2_type -2634 97 1 826 78 93 16 chr5 10302240 10302369 -192783163 - MER85 DNA T2_type 0 139 1 2040 142 7 3 chr5 10302505 10302814 -192782718 + AluSg SINE Alu 1 310 0 326 275 167 0 chr5 10302823 10302943 -192782589 + L1ME4a LINE L1 5775 5914 -207 224 320 70 0 chr5 10303499 10303599 -192781933 + L2 LINE L2 2346 2452 -862 327 315 12 85 chr5 10303615 10303961 -192781571 - MLT1I LTR MaLR -17 392 98 306 145 126 58 chr5 10304018 10304132 -192781400 + MER34 LTR ERV1 433 536 -6 1827 186 0 3 chr5 10304345 10304646 -192780886 - AluJb SINE Alu -7 305 6 1138 248 42 45 chr5 10304650 10305097 -192780435 - MLT1D LTR MaLR -59 446 1 286 330 134 0 chr5 10305262 10305456 -192780076 + MIR SINE MIR 22 241 -21 259 253 40 80 chr5 10306644 10306693 -192778839 + Charlie4 DNA MER1_type 1818 1867 -94 2334 102 0 3 chr5 10306693 10306996 -192778536 - AluSx SINE Alu -10 302 1 259 253 40 80 chr5 10306996 10307096 -192778436 + Charlie4 DNA MER1_type 1867 1961 0 264 59 0 0 chr5 10307568 10307602 -192777930 + (TG)n Simple_repeat Simple_repeat 2 35 0 268 353 0 0 chr5 10307619 10307735 -192777797 + (TG)n Simple_repeat Simple_repeat 1 116 0 256 306 0 14 chr5 10308073 10308145 -192777387 - L2 LINE L2 -2 3270 3200 338 142 125 2 chr5 10308825 10308919 -192776613 + MLT1G LTR MaLR 13 156 -393 532 231 75 0 chr5 10310224 10310358 -192775174 - MER58B DNA MER1_type -1 340 197 360 217 179 0 chr5 10311327 10311433 -192774099 - LTR40a LTR ERVL 0 519 395 473 124 16 141 chr5 10311513 10311634 -192773898 - MER20 DNA MER1_type -5 214 109 1546 178 3 51 chr5 10312699 10313019 -192772513 + AluJo SINE Alu 7 312 0 1898 177 138 5 chr5 10313103 10313481 -192772051 - MSTA LTR MaLR 0 428 1 9230 154 22 54 chr5 10313481 10315186 -192770346 - MSTA-int LTR MaLR 0 1651 1 1968 139 121 67 chr5 10315186 10315590 -192769942 - MSTA LTR MaLR 0 428 3 273 214 135 11 chr5 10315941 10316030 -192769502 - LTR16C LTR ERVL -3 488 389 216 0 0 0 chr5 10319073 10319097 -192766435 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 867 246 65 35 chr5 10319136 10319506 -192766026 - LTR37A LTR ERV1 -7 419 39 201 267 19 95 chr5 10319894 10319999 -192765533 + MIR3 SINE MIR 74 170 -38 477 278 237 0 chr5 10321426 10321620 -192763912 + MIR SINE MIR 13 252 -10 752 276 24 42 chr5 10322716 10323049 -192762483 - LTR16B LTR ERVL -137 327 1 1962 109 0 4 chr5 10324360 10324627 -192760905 - AluSx SINE Alu -46 266 1 188 238 64 87 chr5 10325798 10325970 -192759562 - MER5C DNA MER1_type -136 188 21 275 295 98 8 chr5 10326559 10326681 -192758851 - MIR SINE MIR -4 258 126 480 193 283 0 chr5 10327196 10327341 -192758191 - MER53 DNA DNA 0 189 4 261 0 0 0 chr5 10327599 10327628 -192757904 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2046 189 23 25 chr5 10327654 10328087 -192757445 + Tigger2a DNA MER2_type 3 434 0 946 189 99 128 chr5 10328166 10328448 -192757084 + MLT1C LTR MaLR 37 303 -164 2051 107 0 4 chr5 10328448 10328718 -192756814 + AluSq SINE Alu 1 269 -44 946 189 99 128 chr5 10328718 10328879 -192756653 + MLT1C LTR MaLR 303 467 0 459 209 55 0 chr5 10330000 10330110 -192755422 - L1MA9 LINE L1 -385 5927 5812 776 154 83 6 chr5 10330111 10330140 -192755392 + L1MA9 LINE L1 6122 6147 -165 324 0 0 0 chr5 10330140 10330176 -192755356 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr5 10330175 10330196 -192755336 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 776 154 83 6 chr5 10330176 10330335 -192755197 + L1MA9 LINE L1 6147 6303 -9 780 272 27 5 chr5 10331879 10332103 -192753429 + MLT1C LTR MaLR 239 467 0 180 358 15 0 chr5 10332542 10332609 -192752923 + L2 LINE L2 3246 3313 0 270 179 0 0 chr5 10334467 10334523 -192751009 + GA-rich Low_complexity Low_complexity 3 58 0 2314 107 3 3 chr5 10335824 10336133 -192749399 + AluSx SINE Alu 1 309 -3 1682 174 102 6 chr5 10336179 10336512 -192749020 + MLT1A1 LTR MaLR 1 365 0 251 228 0 0 chr5 10337652 10337709 -192747823 + T-rich Low_complexity Low_complexity 1 57 0 1133 224 82 55 chr5 10338112 10338492 -192747040 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 10341489 10341512 -192744020 + AT_rich Low_complexity Low_complexity 1 23 0 278 258 251 26 chr5 10341603 10341874 -192743658 + L1MC3 LINE L1 5574 5905 -1903 279 351 11 0 chr5 10342076 10342170 -192743362 + MIR SINE MIR 158 252 -10 2047 105 3 20 chr5 10342276 10342571 -192742961 + AluSx SINE Alu 9 298 -14 588 204 0 0 chr5 10343304 10343417 -192742115 + L1MC3 LINE L1 6739 6851 -934 41 21 0 0 chr5 10343434 10343482 -192742050 + AT_rich Low_complexity Low_complexity 1 48 0 936 172 15 25 chr5 10343548 10343752 -192741780 + L1MC3 LINE L1 6893 7094 -691 403 228 54 0 chr5 10343755 10343847 -192741685 + MLT1F1 LTR MaLR 35 131 -436 2630 214 28 7 chr5 10343848 10344418 -192741114 + L1MC3 LINE L1 7202 7783 -2 1866 121 0 4 chr5 10344483 10344740 -192740792 - AluSg SINE Alu -13 297 42 712 218 155 35 chr5 10344740 10345046 -192740486 - Zaphod DNA AcHobo -756 3275 2928 1282 246 53 40 chr5 10345166 10345249 -192740283 - Zaphod DNA AcHobo -1529 2502 2422 957 163 0 27 chr5 10345249 10345433 -192740099 - L1MA9 LINE L1 0 6312 6134 1282 246 53 40 chr5 10345433 10345541 -192739991 - Zaphod DNA AcHobo -1609 2422 2317 2478 91 0 0 chr5 10345541 10345850 -192739682 - AluY SINE Alu -2 309 1 1282 246 53 40 chr5 10345850 10346162 -192739370 - Zaphod DNA AcHobo -1714 2317 1991 234 233 33 0 chr5 10346212 10346272 -192739260 - Zaphod DNA AcHobo -2049 1982 1921 3982 233 66 32 chr5 10346436 10349117 -192736415 - L1MCa LINE L1 -3158 3406 569 1413 203 52 0 chr5 10349291 10349562 -192735970 - L1PB4 LINE L1 -3 6153 5869 766 295 48 63 chr5 10349574 10349987 -192735545 - L1MCa LINE L1 -5638 407 1 476 186 8 0 chr5 10350084 10350202 -192735330 + CT-rich Low_complexity Low_complexity 2 120 0 521 256 32 78 chr5 10350876 10351220 -192734312 - L1MEd LINE L1 -4884 1235 908 234 128 0 0 chr5 10351278 10351317 -192734215 + (TG)n Simple_repeat Simple_repeat 2 40 0 303 143 0 0 chr5 10351481 10351530 -192734002 - L1PA12 LINE L1 0 6168 6120 * 1797 71 0 8 chr5 10351509 10351748 -192733784 + L1PA6 LINE L1 5706 5942 -212 235 308 19 28 chr5 10351777 10351884 -192733648 - MIR SINE MIR -60 202 97 2948 6 0 0 chr5 10351915 10352226 -192733306 + AluYa5 SINE Alu 1 311 0 300 349 88 51 chr5 10352980 10353748 -192731784 - L1MEd LINE L1 -5275 844 48 189 0 0 0 chr5 10355883 10355904 -192729628 + (T)n Simple_repeat Simple_repeat 1 21 0 2107 231 28 36 chr5 10357405 10358065 -192727467 - L1MD3 LINE L1 -34 7948 7108 315 300 0 0 chr5 10358065 10358155 -192727377 + L1MC4 LINE L1 6614 6703 -1339 260 150 0 0 chr5 10358174 10358214 -192727318 - Alu SINE Alu -10 291 252 795 231 36 12 chr5 10358299 10358546 -192726986 - L1 LINE L1 -2118 4028 3776 2401 112 0 0 chr5 10358546 10358858 -192726674 - AluSx SINE Alu 0 312 1 1415 170 30 102 chr5 10358859 10359253 -192726279 - L1MD3 LINE L1 -826 7169 6804 377 223 158 7 chr5 10360877 10361016 -192724516 + LTR33 LTR ERVL 293 452 -69 28 61 0 0 chr5 10361080 10361129 -192724403 + AT_rich Low_complexity Low_complexity 1 49 0 1932 265 34 27 chr5 10361180 10361804 -192723728 - MLT1E3 LTR MaLR -4 620 5 184 121 61 0 chr5 10363259 10363292 -192722240 + L3b LINE CR1 1436 1470 -113 878 269 137 28 chr5 10364352 10364635 -192720897 - LTR16A LTR ERVL -3 447 108 2675 91 8 0 chr5 10364635 10364987 -192720545 - THE1A LTR MaLR 0 355 1 878 269 137 28 chr5 10364987 10365097 -192720435 - LTR16A LTR ERVL -342 108 11 414 294 85 28 chr5 10365219 10365430 -192720102 + MER112 DNA MER1_type 17 239 -21 * 3548 139 55 3 chr5 10365401 10365969 -192719563 + MER50 LTR ERV1 115 711 -23 216 0 0 0 chr5 10367410 10367434 -192718098 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 971 241 65 32 chr5 10367473 10367842 -192717690 - LTR37A LTR ERV1 -7 419 39 361 272 148 0 chr5 10369749 10369911 -192715621 + MIR SINE MIR 13 198 -64 1429 279 33 4 chr5 10370806 10371257 -192714275 - LTR16B LTR ERVL 0 464 1 195 303 156 9 chr5 10371618 10371727 -192713805 + L2 LINE L2 3179 3303 -10 2025 170 29 24 chr5 10372441 10372537 -192712995 - MSTA LTR MaLR 0 428 334 2696 108 11 0 chr5 10372537 10372908 -192712624 - THE1C LTR MaLR 0 375 1 2025 170 29 24 chr5 10372908 10373039 -192712493 - MSTA LTR MaLR -94 334 205 2073 126 7 10 chr5 10373039 10373341 -192712191 - AluSx SINE Alu -11 301 1 2025 170 29 24 chr5 10373341 10373494 -192712038 - MSTA LTR MaLR -223 205 45 2606 193 14 60 chr5 10373648 10374228 -192711304 - MER68 LTR ERV1 -8 554 2 258 271 94 12 chr5 10374474 10374559 -192710973 - L1ME LINE L1 -548 5573 5482 207 0 0 0 chr5 10374968 10374991 -192710541 + (T)n Simple_repeat Simple_repeat 1 23 0 2071 178 35 0 chr5 10375374 10375751 -192709781 + MLT1B LTR MaLR 1 390 0 423 56 42 0 chr5 10375906 10375977 -192709555 + (TTGTG)n Simple_repeat Simple_repeat 1 74 0 356 309 15 7 chr5 10376460 10376596 -192708936 + MER5A DNA MER1_type 50 186 -3 339 177 46 0 chr5 10376771 10376901 -192708631 + (TG)n Simple_repeat Simple_repeat 2 137 0 240 278 28 0 chr5 10376926 10376998 -192708534 + (TG)n Simple_repeat Simple_repeat 1 74 0 209 330 35 52 chr5 10378169 10378284 -192707248 - L2 LINE L2 -43 3229 3117 218 335 47 43 chr5 10378389 10378667 -192706865 - L2 LINE L2 -805 2509 2231 552 265 163 30 chr5 10378779 10379111 -192706421 - L2 LINE L2 -570 2744 2369 2428 130 11 3 chr5 10379135 10379496 -192706036 - THE1B LTR MaLR 0 364 1 272 200 12 0 chr5 10381105 10381185 -192704347 + CT-rich Low_complexity Low_complexity 3 83 0 383 233 39 10 chr5 10383182 10383285 -192702247 + MLT1J LTR MaLR 103 208 -303 535 299 99 5 chr5 10383537 10383748 -192701784 - MIR SINE MIR -7 255 25 290 192 0 0 chr5 10385148 10385200 -192700332 - L1MA8 LINE L1 -23 6268 6217 836 166 31 6 chr5 10385256 10385419 -192700113 - L1MA6 LINE L1 -197 6103 5937 * 1642 152 4 0 chr5 10385418 10385681 -192699851 + L1MA8 LINE L1 5636 5899 -392 5522 175 31 32 chr5 10387115 10387335 -192698197 + L1MC1 LINE L1 5160 5379 -954 2152 104 21 0 chr5 10387335 10387623 -192697909 + AluSx SINE Alu 1 294 -18 5522 175 31 32 chr5 10387623 10388574 -192696958 + L1MC1 LINE L1 5379 6333 0 237 186 0 0 chr5 10388911 10388954 -192696578 - L1M4 LINE L1 -940 5206 5164 180 0 0 0 chr5 10388954 10388974 -192696558 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 254 318 57 0 chr5 10389259 10389347 -192696185 - MIR SINE MIR -73 189 97 480 154 82 27 chr5 10389504 10389614 -192695918 - MER95 LTR ERV 0 431 316 304 300 40 50 chr5 10390107 10390307 -192695225 - L3 LINE CR1 -87 1490 1293 539 41 27 0 chr5 10390373 10390446 -192695086 + (TTTTC)n Simple_repeat Simple_repeat 2 76 0 180 111 0 0 chr5 10391146 10391173 -192694359 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 414 0 0 0 chr5 10391174 10391220 -192694312 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 1301 194 127 12 chr5 10392872 10393218 -192692314 - MLT1C LTR MaLR 0 467 82 282 161 148 37 chr5 10393345 10393426 -192692106 - MLT1C LTR MaLR -375 92 3 947 161 7 13 chr5 10393838 10393993 -192691539 - AluSq SINE Alu -159 154 1 2817 216 112 111 chr5 10394004 10394032 -192691500 - Zaphod DNA AcHobo -1692 2339 2313 1797 107 122 0 chr5 10394032 10394295 -192691237 - AluSq SINE Alu -18 295 1 2817 216 112 111 chr5 10394295 10395682 -192689850 - Zaphod DNA AcHobo -1718 2313 928 1699 122 122 0 chr5 10395682 10395944 -192689588 + AluSq SINE Alu 1 294 -19 2817 216 112 111 chr5 10395944 10395983 -192689549 - Zaphod DNA AcHobo -3103 928 891 2025 134 10 7 chr5 10395983 10396275 -192689257 + AluSq SINE Alu 1 293 -20 2817 216 112 111 chr5 10396275 10396520 -192689012 - Zaphod DNA AcHobo -3140 891 637 548 254 18 47 chr5 10396642 10396811 -192688721 - Zaphod DNA AcHobo -3795 236 73 271 302 65 30 chr5 10396967 10397136 -192688396 + L1ME3A LINE L1 5749 5923 -247 259 273 27 82 chr5 10397248 10397431 -192688101 + L1ME3A LINE L1 5989 6161 -9 190 30 152 0 chr5 10397495 10397528 -192688004 - L2 LINE L2 -2 3311 3274 2002 138 7 0 chr5 10397557 10397848 -192687684 + AluY SINE Alu 1 293 -18 2162 183 54 31 chr5 10397964 10398445 -192687087 - LTR22B LTR ERVK 0 492 1 197 211 19 0 chr5 10400314 10400366 -192685166 + GA-rich Low_complexity Low_complexity 1 53 0 263 296 0 12 chr5 10400367 10400382 -192685150 + G-rich Low_complexity Low_complexity 2 16 -65 1800 193 19 43 chr5 10400382 10400756 -192684776 - MLT1A1 LTR MaLR 0 365 1 263 296 0 12 chr5 10400756 10400821 -192684711 + G-rich Low_complexity Low_complexity 16 81 0 24 0 0 0 chr5 10400978 10401002 -192684530 + AT_rich Low_complexity Low_complexity 1 24 0 722 262 103 11 chr5 10401250 10401624 -192683908 - L1M4 LINE L1 -1484 4662 4250 1014 194 55 27 chr5 10404584 10404913 -192680619 + L1MC2 LINE L1 4979 5316 -830 * 5192 166 19 22 chr5 10404908 10406099 -192679433 - L1PA16 LINE L1 -12 6154 4975 2877 201 24 39 chr5 10406101 10406771 -192678761 + L1MC2 LINE L1 5304 5963 -381 386 340 42 50 chr5 10407378 10407640 -192677892 - L2 LINE L2 -1907 1407 1148 2304 109 7 0 chr5 10407654 10407958 -192677574 + AluSg SINE Alu 1 306 -4 1910 181 3 0 chr5 10407976 10408285 -192677247 + AluSx SINE Alu 1 310 -2 1204 275 44 6 chr5 10408396 10408716 -192676816 + LTR16A LTR ERVL 116 447 -3 1200 293 84 42 chr5 10408722 10409565 -192675967 + L2 LINE L2 2201 3091 -222 2244 116 0 0 chr5 10409565 10409868 -192675664 + AluSq SINE Alu 11 313 0 1200 293 84 42 chr5 10409868 10410101 -192675431 + L2 LINE L2 3091 3313 0 818 163 43 22 chr5 10410327 10410511 -192675021 - MER53 DNA DNA 0 189 2 512 307 88 47 chr5 10410894 10411317 -192674215 + LTR33 LTR ERVL 5 444 -77 3080 169 78 31 chr5 10411318 10411541 -192673991 + MER7C DNA MER2_type 1 212 -2816 188 67 33 0 chr5 10411541 10411571 -192673961 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 3080 169 78 31 chr5 10411571 10411922 -192673610 + MER7C DNA MER2_type 212 602 0 2470 124 3 0 chr5 10412615 10412962 -192672570 - L1PA13 LINE L1 -14 6149 5802 21 57 0 0 chr5 10414325 10414360 -192671172 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr5 10414391 10414445 -192671087 + AT_rich Low_complexity Low_complexity 1 54 0 1627 90 36 0 chr5 10414578 10414800 -192670732 + L1PA10 LINE L1 5935 6164 -4 36 53 0 0 chr5 10414929 10414986 -192670546 + AT_rich Low_complexity Low_complexity 1 57 0 270 285 51 15 chr5 10415119 10415256 -192670276 - MIR SINE MIR -40 222 81 345 24 0 0 chr5 10415271 10415313 -192670219 + (TG)n Simple_repeat Simple_repeat 2 43 0 1369 214 206 3 chr5 10415316 10415694 -192669838 - MLT2B2 LTR ERVL -60 455 1 235 296 0 35 chr5 10415811 10415926 -192669606 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 * 274 275 58 7 chr5 10415867 10416005 -192669527 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 1798 138 64 3 chr5 10416244 10416527 -192669005 - AluJb SINE Alu -12 300 1 12608 176 22 8 chr5 10417809 10419529 -192666003 - L1PB3 LINE L1 0 6154 4460 230 29 59 0 chr5 10419529 10419563 -192665969 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 12608 176 22 8 chr5 10419563 10419968 -192665564 - L1PB3 LINE L1 -1694 4460 4062 1962 138 10 3 chr5 10419968 10420264 -192665268 - AluSg SINE Alu -12 298 1 12608 176 22 8 chr5 10420264 10421609 -192663923 - L1PB3 LINE L1 -2092 4062 2633 1164 221 31 7 chr5 10421881 10422186 -192663346 - L1MB5 LINE L1 0 6180 5867 1114 219 16 27 chr5 10422185 10422441 -192663091 + L1MB5 LINE L1 5625 5877 -297 * 24 0 0 0 chr5 10422824 10422848 -192662684 + AT_rich Low_complexity Low_complexity 1 24 0 254 250 7 0 chr5 10424125 10424277 -192661255 + (CA)n Simple_repeat Simple_repeat 2 154 0 323 118 20 0 chr5 10424962 10425013 -192660519 - MLT1A1 LTR MaLR -313 52 1 298 294 28 18 chr5 10425107 10425216 -192660316 + MER94 DNA DNA 3 112 -22 1609 135 54 0 chr5 10425312 10425571 -192659961 - AluSx SINE Alu 0 312 40 21 36 0 0 chr5 10426506 10426534 -192658998 + AT_rich Low_complexity Low_complexity 1 28 0 1664 184 23 26 chr5 10428727 10429037 -192656495 + AluJo SINE Alu 1 309 -3 201 178 22 0 chr5 10429641 10429686 -192655846 + L2 LINE L2 3268 3313 0 306 0 0 0 chr5 10431439 10431473 -192654059 + (CA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 10432023 10432046 -192653486 + AT_rich Low_complexity Low_complexity 1 23 0 229 297 33 11 chr5 10432419 10432510 -192653022 - MLT1H LTR MaLR 0 549 457 2235 206 11 31 chr5 10434304 10434751 -192650781 + MLT2B3 LTR ERVL 9 446 -108 426 265 54 20 chr5 10435795 10435942 -192649590 + LTR33 LTR ERVL 316 467 -54 1817 157 10 3 chr5 10435964 10436269 -192649263 - AluSx SINE Alu -1 311 5 1529 93 29 0 chr5 10437018 10437223 -192648309 + AluSc SINE Alu 93 303 -6 274 290 20 60 chr5 10437266 10437366 -192648166 - MIR SINE MIR -73 135 40 320 313 106 28 chr5 10438003 10438148 -192647384 + L2 LINE L2 1548 1717 -1597 2228 115 0 16 chr5 10438148 10438462 -192647070 + AluSx SINE Alu 1 309 -3 320 313 106 28 chr5 10438462 10438533 -192646999 + L2 LINE L2 1717 1781 -1533 665 272 123 6 chr5 10438578 10438894 -192646638 + L2 LINE L2 2073 2425 -889 192 237 17 0 chr5 10438910 10438969 -192646563 + L2 LINE L2 2366 2425 -889 422 301 35 12 chr5 10439218 10439391 -192646141 + L2 LINE L2 2366 2542 -772 1334 186 54 11 chr5 10439396 10439675 -192645857 - MER2 DNA MER2_type -7 338 48 441 50 0 0 chr5 10440199 10440259 -192645273 + (TG)n Simple_repeat Simple_repeat 1 60 0 317 161 345 0 chr5 10440328 10440415 -192645117 - L2 LINE L2 -4 3309 3193 392 118 15 0 chr5 10440491 10440559 -192644973 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 1490 208 83 38 chr5 10440942 10441385 -192644147 + MLT1C LTR MaLR 5 467 0 347 153 56 14 chr5 10441530 10441602 -192643930 + MIR SINE MIR 98 172 -90 208 107 0 0 chr5 10441600 10441628 -192643904 - MIR SINE MIR -218 44 17 * 1680 196 32 27 chr5 10444342 10444714 -192640818 + MLT2D LTR ERVL 1 374 -40 305 179 45 0 chr5 10444786 10444853 -192640679 + MLT2D LTR ERVL 451 520 0 2164 126 0 0 chr5 10446616 10446909 -192638623 - AluSx SINE Alu -14 298 6 21 0 0 0 chr5 10447340 10447361 -192638171 + AT_rich Low_complexity Low_complexity 1 21 0 1101 231 43 61 chr5 10447410 10447786 -192637746 + MLT1A2 LTR MaLR 2 370 -4 23 0 0 0 chr5 10448006 10448029 -192637503 + AT_rich Low_complexity Low_complexity 1 23 0 1683 156 33 77 chr5 10448842 10448860 -192636672 - MER93b LTR ERV1 0 373 356 1994 134 13 29 chr5 10448860 10449167 -192636365 + AluSx SINE Alu 1 302 -10 1683 156 33 77 chr5 10449167 10449538 -192635994 - MER93b LTR ERV1 -17 356 1 634 300 77 13 chr5 10449547 10449780 -192635752 - MIR SINE MIR -1 261 14 1397 224 43 19 chr5 10450626 10451042 -192634490 + MLT1C LTR MaLR 1 426 -41 267 333 90 9 chr5 10451682 10451821 -192633711 + MIR SINE MIR 17 166 -63 1230 157 101 173 chr5 10455666 10455947 -192629585 - MLT1C LTR MaLR 0 467 236 2233 112 3 0 chr5 10455947 10456250 -192629282 + AluSx SINE Alu 5 308 -4 1230 157 101 173 chr5 10456250 10456471 -192629061 - MLT1C LTR MaLR -231 236 1 299 271 51 25 chr5 10457129 10457247 -192628285 + MIR SINE MIR 16 136 -72 207 288 25 76 chr5 10458675 10458793 -192626739 - MIR SINE MIR -42 220 109 1949 159 21 40 chr5 10458980 10459352 -192626180 - MLT1A1 LTR MaLR 0 365 1 1947 198 15 69 chr5 10459377 10459842 -192625690 - MLT1A1-int LTR MaLR -42 1693 1254 * 2504 253 73 63 chr5 10459809 10459969 -192625563 - MLT1A1-int LTR MaLR -630 1105 948 2794 175 26 72 chr5 10459969 10460610 -192624922 + LTR9 LTR ERV1 1 612 0 2504 253 73 63 chr5 10460610 10461374 -192624158 - MLT1A1-int LTR MaLR -787 948 171 993 218 27 46 chr5 10461395 10461656 -192623876 + MLT1A1 LTR MaLR 1 256 -109 536 205 0 17 chr5 10461656 10461773 -192623759 - L1PA15 LINE L1 0 6165 6051 567 186 18 0 chr5 10461875 10461988 -192623544 - L1PA15 LINE L1 -549 5619 5505 427 240 0 56 chr5 10461989 10462114 -192623418 + MLT1A1 LTR MaLR 246 363 -2 364 269 0 21 chr5 10462116 10462209 -192623323 - MLT1A1 LTR MaLR -272 93 3 22 0 0 0 chr5 10463766 10463788 -192621744 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 10463853 10463880 -192621652 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 949 93 29 88 chr5 10463880 10464085 -192621447 - L1PA10 LINE L1 -13 6155 5963 937 179 72 9 chr5 10464195 10464418 -192621114 + L1MC2 LINE L1 6099 6335 -9 2115 137 7 0 chr5 10465613 10465919 -192619613 - AluSx SINE Alu -4 308 1 2208 150 6 107 chr5 10466492 10466749 -192618783 - MER41C LTR ERV1 -1 634 352 2165 142 129 5 chr5 10466749 10467130 -192618402 + MSTA LTR MaLR 1 428 0 2208 150 6 107 chr5 10467130 10467488 -192618044 - MER41C LTR ERV1 -283 352 1 1322 209 81 60 chr5 10468005 10468387 -192617145 + MLT1B LTR MaLR 1 390 0 22 35 0 0 chr5 10470231 10470260 -192615272 + AT_rich Low_complexity Low_complexity 1 29 0 2602 108 5 24 chr5 10472027 10472398 -192613134 + THE1B LTR MaLR 1 364 0 351 0 0 0 chr5 10472958 10472997 -192612535 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 861 255 180 19 chr5 10476316 10476688 -192608844 + MLT1H LTR MaLR 1 432 -117 251 293 19 24 chr5 10476690 10476799 -192608733 - MIR SINE MIR -94 114 4 264 77 0 0 chr5 10476960 10476999 -192608533 + (TC)n Simple_repeat Simple_repeat 1 39 0 1688 172 14 24 chr5 10477664 10477961 -192607571 + AluJb SINE Alu 5 298 -14 274 325 73 24 chr5 10477967 10478090 -192607442 - MIR SINE MIR -74 188 60 1977 63 35 3 chr5 10478557 10478842 -192606690 + L1PA10 LINE L1 5731 6024 -144 1745 122 0 0 chr5 10478948 10479203 -192606329 + L1PA13 LINE L1 5907 6161 -2 339 250 88 56 chr5 10479223 10479383 -192606149 - L1MC/D LINE L1 -2341 5467 5303 435 236 0 0 chr5 10479476 10479565 -192605967 + MER58A DNA MER1_type 1 89 -18 2198 134 7 0 chr5 10480016 10480323 -192605209 + AluSx SINE Alu 1 309 -3 647 270 23 0 chr5 10481315 10481489 -192604043 - MER5B DNA MER1_type 0 178 1 310 252 61 30 chr5 10481691 10481822 -192603710 - MIR SINE MIR -100 162 28 2321 108 0 0 chr5 10484431 10484736 -192600796 + AluSx SINE Alu 7 311 -1 1964 142 33 0 chr5 10486470 10486772 -192598760 - AluJo SINE Alu 0 312 1 713 235 110 83 chr5 10487406 10487997 -192597535 + MLT1F1 LTR MaLR 1 567 0 21 0 0 0 chr5 10488054 10488075 -192597457 + AT_rich Low_complexity Low_complexity 1 21 0 337 247 41 14 chr5 10488076 10488149 -192597383 + MER21B LTR ERV1 15 89 -774 2886 243 110 8 chr5 10488171 10488937 -192596595 + MER21B LTR ERV1 19 862 -1 459 288 24 90 chr5 10490504 10490757 -192594775 - MIR SINE MIR -10 252 23 237 163 0 0 chr5 10490980 10491023 -192594509 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 654 257 44 79 chr5 10491472 10491787 -192593745 + L2 LINE L2 2979 3282 -31 431 225 163 78 chr5 10491825 10491916 -192593616 + HAL1 LINE L1 1010 1092 -1415 2103 121 0 0 chr5 10491916 10492198 -192593334 + AluSx SINE Alu 1 282 -30 431 225 163 78 chr5 10492198 10492364 -192593168 + HAL1 LINE L1 1092 1289 -1218 592 249 92 18 chr5 10492405 10492634 -192592898 + LTR33 LTR ERVL 4 249 -272 247 219 16 31 chr5 10492995 10493059 -192592473 + LTR33 LTR ERVL 456 518 -3 373 273 74 34 chr5 10493071 10493247 -192592285 + HAL1 LINE L1 1336 1518 -989 549 288 47 56 chr5 10494708 10494962 -192590570 + MIR SINE MIR 3 246 -16 2084 174 16 8 chr5 10495508 10495894 -192589638 - L1MA7 LINE L1 -1 7709 7321 3367 33 5 18 chr5 10495896 10496293 -192589239 + L1PA4 LINE L1 5764 6155 0 6175 147 28 27 chr5 10496296 10497996 -192587536 - L1MA7 LINE L1 -373 7337 5644 377 178 46 36 chr5 10498016 10498407 -192587125 + (TATAA)n Simple_repeat Simple_repeat 1 394 0 8779 216 53 13 chr5 10498536 10500988 -192584544 - L1MA7 LINE L1 -1918 5647 3084 41 0 0 0 chr5 10501012 10501053 -192584479 + AT_rich Low_complexity Low_complexity 1 41 0 439 147 8 9 chr5 10501059 10501168 -192584364 - L1M2 LINE L1 -513 5778 5597 2291 48 4 0 chr5 10501168 10501436 -192584096 - L1PA5 LINE L1 0 6154 5886 517 111 0 0 chr5 10501541 10501613 -192583919 - AluS SINE Alu -8 303 232 2017 158 0 0 chr5 10501656 10501960 -192583572 - AluSx SINE Alu -8 304 1 886 303 27 30 chr5 10502470 10502800 -192582732 - LTR16A LTR ERVL 0 450 122 2183 178 11 13 chr5 10504392 10504768 -192580764 - THE1C LTR MaLR 0 375 1 379 288 65 51 chr5 10505471 10506038 -192579494 + L1ME LINE L1 5257 5856 -265 232 308 0 0 chr5 10506201 10506266 -192579266 + A-rich Low_complexity Low_complexity 1 65 0 297 355 0 0 chr5 10509686 10509793 -192575739 + L3b LINE CR1 1249 1355 -228 3622 201 47 17 chr5 10511066 10511384 -192574148 - L1MB7 LINE L1 -30 6154 5847 1207 144 55 15 chr5 10511384 10511586 -192573946 - MER6B DNA MER2_type 0 210 1 3622 201 47 17 chr5 10511586 10512238 -192573294 - L1MB7 LINE L1 -337 5847 5147 238 214 0 0 chr5 10512272 10512314 -192573218 - MER106B DNA MER1_type 0 1059 1018 581 215 90 42 chr5 10512335 10512479 -192573053 - MER106B DNA MER1_type -908 151 1 215 170 43 0 chr5 10513948 10513995 -192571537 + CT-rich Low_complexity Low_complexity 1 49 0 2099 152 0 0 chr5 10514897 10515200 -192570332 - AluSx SINE Alu -9 303 1 630 78 0 0 chr5 10515508 10515585 -192569947 + MADE1 DNA Mariner 4 80 0 9116 76 26 1 chr5 10516466 10517621 -192567911 + HERVL LTR ERVL 2047 3230 -2424 14144 72 6 17 chr5 10517626 10519448 -192566084 + HERVL LTR ERVL 3503 5304 -350 875 282 109 30 chr5 10519480 10520023 -192565509 - L1MB7 LINE L1 -1741 4405 3820 538 333 143 28 chr5 10520094 10520781 -192564751 - L1MEc LINE L1 -4131 2432 1667 221 29 0 57 chr5 10520793 10520828 -192564704 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 214 125 42 0 chr5 10520860 10520908 -192564624 + (TA)n Simple_repeat Simple_repeat 1 50 0 236 330 18 0 chr5 10520908 10521020 -192564512 - L1MEc LINE L1 -4899 1485 1372 1177 227 139 17 chr5 10521870 10522013 -192563519 + MSTD LTR MaLR 2 126 -270 2231 120 3 0 chr5 10522013 10522314 -192563218 + AluSx SINE Alu 1 302 -10 1177 227 139 17 chr5 10522314 10522522 -192563010 + MSTD LTR MaLR 126 396 0 329 271 232 13 chr5 10523249 10523404 -192562128 + MIR SINE MIR 57 245 -17 208 356 0 14 chr5 10523792 10523865 -192561667 - MIR SINE MIR -169 93 22 345 194 0 0 chr5 10524053 10524115 -192561417 + FLAM_A SINE Alu 71 132 -1 36 0 0 0 chr5 10524115 10524151 -192561381 + AT_rich Low_complexity Low_complexity 1 36 0 204 67 0 0 chr5 10524151 10524181 -192561351 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 863 169 0 26 chr5 10524186 10524199 -192561333 + AluJo SINE Alu 123 135 -177 2071 118 35 3 chr5 10524199 10524487 -192561045 + AluSx SINE Alu 1 297 -15 863 169 0 26 chr5 10524487 10524616 -192560916 + AluJo SINE Alu 135 263 -49 249 83 0 0 chr5 10524616 10524652 -192560880 + (CAA)n Simple_repeat Simple_repeat 1 36 0 1385 176 77 35 chr5 10524847 10525159 -192560373 + MLT1A1 LTR MaLR 39 363 -2 648 218 292 9 chr5 10526191 10526786 -192558746 + LTR50 LTR ERVL 9 794 -1 2010 233 45 11 chr5 10526828 10527271 -192558261 + MLT1C LTR MaLR 1 458 -9 348 252 53 30 chr5 10527496 10527627 -192557905 + LTR16A LTR ERVL 233 366 -84 2188 97 3 7 chr5 10528637 10528925 -192556607 - AluSq SINE Alu -13 300 14 25 31 0 0 chr5 10529101 10529133 -192556399 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 10530107 10530136 -192555396 + AT_rich Low_complexity Low_complexity 1 29 0 670 211 28 22 chr5 10530587 10530767 -192554765 + L1ME3 LINE L1 4424 4604 -1542 307 233 207 9 chr5 10530787 10530903 -192554629 - L1M4 LINE L1 -1524 4622 4484 442 245 161 10 chr5 10531055 10531247 -192554285 - L1M4 LINE L1 -2846 3300 3080 5502 150 45 15 chr5 10531256 10531518 -192554014 + L1PB1 LINE L1 4883 5136 -1015 2198 107 0 41 chr5 10531518 10531836 -192553696 - AluSg SINE Alu -5 305 1 5502 150 45 15 chr5 10531836 10532738 -192552794 + L1PB1 LINE L1 5136 6150 -1 1620 229 103 63 chr5 10532802 10533552 -192551980 + L1ME3 LINE L1 5298 6077 -85 217 311 54 0 chr5 10533615 10533689 -192551843 + L2 LINE L2 2966 3043 -229 288 141 55 16 chr5 10534369 10534497 -192551035 + (TA)n Simple_repeat Simple_repeat 2 134 0 242 211 37 28 chr5 10534527 10534636 -192550896 + (TA)n Simple_repeat Simple_repeat 1 110 0 1035 235 90 36 chr5 10534770 10535379 -192550153 + MER76 LTR ERV 3 682 -6 245 261 15 15 chr5 10536694 10536759 -192548773 - L2 LINE L2 -5 3267 3203 2513 119 107 20 chr5 10536844 10537238 -192548294 - MSTA LTR MaLR 0 428 1 2682 136 2 5 chr5 10537238 10537643 -192547889 - MSTA-int LTR MaLR 0 1651 1248 14486 154 50 12 chr5 10538054 10544054 -192541478 - L1PB1 LINE L1 -1 6866 634 1098 182 5 0 chr5 10544057 10544249 -192541283 - L1PB1 LINE L1 -6668 195 3 1777 148 14 11 chr5 10544276 10544554 -192540978 - AluSg SINE Alu -18 292 14 2274 102 54 23 chr5 10544884 10545237 -192540295 + THE1B LTR MaLR 1 364 0 11455 103 10 1 chr5 10545237 10546803 -192538729 + THE1B-int LTR MaLR 1 1580 0 2195 108 60 28 chr5 10546803 10547156 -192538376 + THE1B LTR MaLR 1 364 0 182 313 15 0 chr5 10547300 10547367 -192538165 + MIR3 SINE MIR 111 178 -30 285 291 3 11 chr5 10548453 10548554 -192536978 + MIR SINE MIR 20 121 -87 1763 214 63 0 chr5 10549430 10549808 -192535724 - MER57A LTR ERV1 -1 402 1 184 254 9 9 chr5 10550220 10550334 -192535198 + (TG)n Simple_repeat Simple_repeat 1 114 0 325 281 0 15 chr5 10550346 10550481 -192535051 + (TG)n Simple_repeat Simple_repeat 2 134 0 214 167 46 56 chr5 10552111 10552219 -192533313 + (TATAA)n Simple_repeat Simple_repeat 2 108 0 498 104 14 49 chr5 10552223 10552367 -192533165 + (TA)n Simple_repeat Simple_repeat 1 139 0 284 164 0 82 chr5 10553292 10553365 -192532167 - MLT2B1 LTR ERVL 0 520 454 970 243 58 29 chr5 10553379 10553692 -192531840 + MER2 DNA MER2_type 4 325 -20 324 0 0 0 chr5 10553706 10553742 -192531790 + (CA)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr5 10553829 10553852 -192531680 + (A)n Simple_repeat Simple_repeat 1 23 0 2087 244 30 38 chr5 10553897 10554469 -192531063 + MER90 LTR ERV1 5 573 -41 1847 207 11 3 chr5 10554469 10554831 -192530701 - MLT1A1 LTR MaLR 0 365 1 2087 244 30 38 chr5 10554831 10554869 -192530663 + MER90 LTR ERV1 573 610 -4 217 302 54 39 chr5 10555038 10555167 -192530365 - L2 LINE L2 -256 3057 2927 2253 108 0 0 chr5 10555555 10555842 -192529690 - AluSx SINE Alu -25 287 1 21 36 0 0 chr5 10555972 10556000 -192529532 + AT_rich Low_complexity Low_complexity 1 28 0 781 239 91 0 chr5 10556127 10556357 -192529175 - MIR SINE MIR 0 262 12 21 0 0 0 chr5 10557326 10557347 -192528185 + AT_rich Low_complexity Low_complexity 1 21 0 547 125 0 0 chr5 10557825 10557905 -192527627 + MADE1 DNA Mariner 1 80 0 180 295 16 0 chr5 10558028 10558089 -192527443 + L2 LINE L2 2691 2752 -562 935 214 45 67 chr5 10558145 10558458 -192527074 + MLT1B LTR MaLR 85 390 0 205 229 0 49 chr5 10559086 10559147 -192526385 + CT-rich Low_complexity Low_complexity 1 58 0 214 306 74 8 chr5 10559499 10559620 -192525912 - L2 LINE L2 -1 3312 3184 190 308 33 0 chr5 10560511 10560602 -192524930 - MIR SINE MIR -120 142 49 2284 107 0 0 chr5 10562248 10562558 -192522974 - AluSx SINE Alu -2 310 1 608 262 29 14 chr5 10563524 10563734 -192521798 - MER20 DNA MER1_type -3 216 4 817 229 124 1 chr5 10565199 10565424 -192520108 - MLT1D LTR MaLR 0 505 226 1004 138 0 0 chr5 10565458 10565603 -192519929 + AluSg/x SINE Alu 135 279 -33 261 0 0 0 chr5 10565604 10565633 -192519899 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 434 183 17 126 chr5 10565650 10565724 -192519808 - MLT1D LTR MaLR -349 156 110 1999 194 3 6 chr5 10565724 10566090 -192519442 + MLT1A1 LTR MaLR 1 365 0 434 183 17 126 chr5 10566090 10566190 -192519342 - MLT1D LTR MaLR -395 110 1 558 299 7 0 chr5 10567076 10567220 -192518312 - MIR SINE MIR -105 157 13 28 29 0 0 chr5 10569035 10569070 -192516462 + AT_rich Low_complexity Low_complexity 1 35 0 3364 235 40 23 chr5 10569288 10570071 -192515461 - L1ME1 LINE L1 -49 6117 5327 2135 140 0 3 chr5 10570071 10570378 -192515154 + AluSg SINE Alu 1 306 -4 3364 235 40 23 chr5 10570378 10570530 -192515002 - L1ME1 LINE L1 -839 5327 5179 1416 207 155 17 chr5 10570530 10570830 -192514702 + MSTD LTR MaLR 1 357 -39 2740 126 34 0 chr5 10570830 10571244 -192514288 - MSTA LTR MaLR 0 428 1 1416 207 155 17 chr5 10571244 10571291 -192514241 + MSTD LTR MaLR 357 396 0 2015 255 48 14 chr5 10571335 10572144 -192513388 - L1ME1 LINE L1 -1025 5121 4285 1284 19 0 37 chr5 10572211 10572373 -192513159 - L1PA4 LINE L1 0 6155 6000 1532 6 0 0 chr5 10573491 10573658 -192511874 - L1PA4 LINE L1 -212 5943 5777 1750 20 0 0 chr5 10573658 10573852 -192511680 + L1PA4 LINE L1 5956 6153 -2 292 250 144 47 chr5 10574164 10574337 -192511195 - MLT1H1 LTR MaLR -1 554 354 4440 98 21 2 chr5 10574361 10574975 -192510557 - MER41B LTR ERV1 -9 626 1 265 297 93 33 chr5 10575098 10575267 -192510265 - MLT1H1 LTR MaLR -290 265 76 753 268 13 31 chr5 10576384 10576445 -192509087 - MER58A DNA MER1_type -2196 224 163 2255 147 50 21 chr5 10576445 10576882 -192508650 + LTR7 LTR ERV1 1 450 0 753 268 13 31 chr5 10576882 10577048 -192508484 - MER58A DNA MER1_type -2257 163 1 469 233 23 39 chr5 10577053 10577182 -192508350 - MER5A DNA MER1_type 0 189 63 345 315 47 7 chr5 10577578 10577727 -192507805 - MIR SINE MIR 0 262 108 294 295 11 0 chr5 10577733 10577828 -192507704 - MIR SINE MIR -90 172 77 2234 102 30 25 chr5 10579827 10580370 -192505162 - MER51A LTR ERV1 0 634 1 1503 199 192 12 chr5 10580373 10580780 -192504752 - MLT2B1 LTR ERVL -40 480 1 878 188 81 22 chr5 10582307 10582530 -192503002 - LTR34 LTR ERV1 0 699 464 1435 75 27 0 chr5 10582546 10582732 -192502800 - MER30 DNA MER1_type -34 196 6 2010 131 84 73 chr5 10582737 10582902 -192502630 - LTR34 LTR ERV1 -228 471 309 1686 141 80 29 chr5 10582902 10583178 -192502354 + AluSg SINE Alu 1 290 -20 2010 131 84 73 chr5 10583178 10583478 -192502054 - LTR34 LTR ERV1 -390 309 1 222 220 0 0 chr5 10584888 10584947 -192500585 + CT-rich Low_complexity Low_complexity 4 62 0 342 188 52 52 chr5 10584972 10585068 -192500464 - L2 LINE L2 -49 3264 3169 211 263 90 15 chr5 10585370 10585503 -192500029 - L2 LINE L2 -422 2892 2750 2647 108 11 0 chr5 10586666 10587037 -192498495 - THE1C LTR MaLR 0 375 1 480 256 0 0 chr5 10587843 10587999 -192497533 + (TG)n Simple_repeat Simple_repeat 1 156 0 423 262 0 0 chr5 10588021 10588166 -192497366 + (TG)n Simple_repeat Simple_repeat 2 146 0 352 296 0 0 chr5 10588189 10588304 -192497228 - MIR SINE MIR -128 134 20 573 256 45 5 chr5 10588855 10589054 -192496478 + L2 LINE L2 2950 3156 -157 1965 197 28 30 chr5 10589076 10589403 -192496129 - L1MB5 LINE L1 -17 6157 5830 2129 125 0 3 chr5 10589403 10589706 -192495826 - AluSx SINE Alu -10 302 1 1965 197 28 30 chr5 10589706 10589815 -192495717 - L1MB5 LINE L1 -344 5830 5722 5315 145 34 14 chr5 10589815 10590697 -192494835 - MER49 LTR ERV1 0 923 24 419 177 104 0 chr5 10590711 10590807 -192494725 - L1MB5 LINE L1 -449 5725 5620 26 30 0 0 chr5 10591177 10591210 -192494322 + AT_rich Low_complexity Low_complexity 1 33 0 385 260 10 102 chr5 10591452 10591648 -192493884 - MER5B DNA MER1_type 0 178 1 220 261 0 31 chr5 10591844 10591909 -192493623 + MER5A DNA MER1_type 8 70 -119 417 290 111 12 chr5 10592794 10592956 -192492576 + L3b LINE CR1 1343 1520 -63 318 240 50 0 chr5 10593203 10593303 -192492229 + GA-rich Low_complexity Low_complexity 1 105 0 3858 139 7 2 chr5 10594004 10594558 -192490974 + MER41D LTR ERV1 1 557 0 551 191 48 34 chr5 10595190 10595337 -192490195 + MER103 DNA DNA 2 150 -16 1533 239 12 6 chr5 10595623 10595954 -192489578 + MER58B DNA MER1_type 1 333 -8 1961 47 9 0 chr5 10595954 10596186 -192489346 - L1PA7 LINE L1 -475 5679 5446 3665 74 4 13 chr5 10596186 10596657 -192488875 + L1PA7 LINE L1 5685 6154 0 2125 122 0 3 chr5 10597550 10597844 -192487688 + AluSx SINE Alu 9 301 -11 2548 158 58 16 chr5 10599303 10599751 -192485781 - MLT1C LTR MaLR 0 467 1 308 358 42 0 chr5 10599852 10599972 -192485560 + MER5B DNA MER1_type 21 145 -33 6904 137 8 64 chr5 10600292 10600451 -192485081 - HSMAR2 DNA Mariner -118 1184 1018 2111 128 0 7 chr5 10600451 10600747 -192484785 + AluSx SINE Alu 1 294 -18 6904 137 8 64 chr5 10600747 10601840 -192483692 - HSMAR2 DNA Mariner -284 1018 2 6313 211 27 37 chr5 10602967 10605640 -192479892 - L1MC1 LINE L1 -314 6019 3376 2313 136 33 25 chr5 10606014 10606375 -192479157 - THE1B LTR MaLR 0 364 1 210 118 0 0 chr5 10608112 10608146 -192477386 + (GA)n Simple_repeat Simple_repeat 1 34 0 2197 259 28 44 chr5 10611268 10611562 -192473970 - L1MD3 LINE L1 -7 8035 7738 2171 113 0 0 chr5 10611562 10611845 -192473687 - AluSq SINE Alu -26 287 5 2197 259 28 44 chr5 10611845 10612335 -192473197 - L1MD3 LINE L1 -304 7738 7280 2623 125 8 3 chr5 10612335 10612696 -192472836 - THE1B LTR MaLR -1 363 1 2197 259 28 44 chr5 10612696 10612763 -192472769 - L1MD3 LINE L1 -762 7280 7213 23 33 0 0 chr5 10612885 10612915 -192472617 + AT_rich Low_complexity Low_complexity 1 30 0 364 297 71 23 chr5 10613494 10613760 -192471772 + L1M4 LINE L1 2697 2975 -3171 283 354 77 0 chr5 10614787 10614917 -192470615 + MIR SINE MIR 8 147 -115 419 143 0 0 chr5 10614917 10614980 -192470552 - MSTA LTR MaLR 0 428 366 * 647 160 0 25 chr5 10614967 10615086 -192470446 - MSTA LTR MaLR -312 116 1 2044 102 26 22 chr5 10615086 10615399 -192470133 - MSTA-int LTR MaLR 0 1580 1267 638 148 289 0 chr5 10615399 10615534 -192469998 - MSTA LTR MaLR -252 176 3 1302 177 262 12 chr5 10615545 10615703 -192469829 + MSTA LTR MaLR 19 136 -292 189 0 0 0 chr5 10615703 10615724 -192469808 + (TC)n Simple_repeat Simple_repeat 1 21 0 1302 177 262 12 chr5 10615724 10615893 -192469639 + MSTA LTR MaLR 136 428 0 268 242 67 67 chr5 10615893 10616013 -192469519 + MIR SINE MIR 143 262 0 258 262 24 0 chr5 10616213 10616297 -192469235 + L1ME LINE L1 52 137 -5933 1877 272 73 47 chr5 10616698 10618936 -192466596 + L1ME LINE L1 390 2693 -3387 * 2404 263 92 4 chr5 10618933 10619756 -192465776 - L1M4 LINE L1 -1342 4804 3909 465 293 6 13 chr5 10619751 10619908 -192465624 + L1ME1 LINE L1 6006 6161 -5 * 256 278 120 0 chr5 10621682 10621790 -192463742 + L1ME4a LINE L1 5999 6119 -2 235 217 17 17 chr5 10623713 10623773 -192461759 + MIR SINE MIR 86 145 -117 1351 226 43 48 chr5 10624009 10624381 -192461151 - MLT1A2 LTR MaLR -1 373 4 594 54 14 0 chr5 10627180 10627254 -192458278 - MER4B LTR ERV1 -8 602 528 636 311 34 0 chr5 10629147 10629356 -192456176 - MIR SINE MIR -45 217 2 234 0 0 0 chr5 10629364 10629390 -192456142 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 227 311 8 25 chr5 10629400 10629522 -192456010 + L1MEd LINE L1 53 172 -5947 744 182 8 8 chr5 10629938 10630070 -192455462 + FRAM SINE Alu 34 165 -11 396 0 0 0 chr5 10630519 10630563 -192454969 + (CA)n Simple_repeat Simple_repeat 2 45 0 250 311 56 28 chr5 10630970 10631150 -192454382 + L2 LINE L2 2775 2959 -355 205 305 102 0 chr5 10631082 10631200 -192454332 + MIR SINE MIR 59 188 -74 * 2283 73 20 3 chr5 10631787 10631907 -192453625 + AluY SINE Alu 1 118 -193 495 33 0 0 chr5 10631907 10631968 -192453564 + (CA)n Simple_repeat Simple_repeat 2 62 0 2283 73 20 3 chr5 10631968 10632147 -192453385 + AluY SINE Alu 118 305 -6 273 128 0 0 chr5 10632613 10632660 -192452872 + (CA)n Simple_repeat Simple_repeat 2 48 0 699 125 8 25 chr5 10634990 10635110 -192450422 + MER4D LTR ERV1 1 118 -785 * 3840 128 37 37 chr5 10635103 10635745 -192449787 - MER4D LTR ERV1 -90 782 141 307 259 82 0 chr5 10635756 10635841 -192449691 + MLT2B1 LTR ERVL 370 461 -59 3785 200 46 12 chr5 10635871 10636625 -192448907 + MLT-int LTR MaLR 1 780 -955 302 344 103 43 chr5 10636760 10637393 -192448139 + L2 LINE L2 2088 2758 -556 2529 142 61 0 chr5 10637558 10637953 -192447579 - MSTA LTR MaLR -9 419 1 600 279 83 10 chr5 10638692 10639007 -192446525 - L1ME3A LINE L1 -12 6158 5815 278 355 142 18 chr5 10639036 10639318 -192446214 + L3 LINE CR1 1258 1574 -3 1794 150 0 24 chr5 10640460 10640754 -192444778 - AluSx SINE Alu -15 297 11 232 125 0 42 chr5 10641671 10641719 -192443813 + LTR66 LTR ERVL 394 439 -171 391 231 22 52 chr5 10642563 10642697 -192442835 - Charlie7 DNA MER1_type -1927 685 556 231 380 0 0 chr5 10642755 10642826 -192442706 + L2 LINE L2 3143 3213 -59 375 311 40 13 chr5 10642876 10643027 -192442505 - L2 LINE L2 -224 3089 2935 302 229 19 57 chr5 10643040 10643145 -192442387 - Charlie7 DNA MER1_type -2088 524 424 1743 293 26 26 chr5 10643145 10643239 -192442293 - L1MEc LINE L1 -5646 750 657 1883 81 102 42 chr5 10643239 10643522 -192442010 + AluY SINE Alu 1 300 -11 1743 293 26 26 chr5 10643522 10644143 -192441389 - L1MEc LINE L1 -5738 658 35 277 313 75 0 chr5 10644259 10644393 -192441139 - Charlie7 DNA MER1_type -2208 404 261 985 257 168 32 chr5 10645457 10645932 -192439600 - L1ME2 LINE L1 -2 6162 5623 1436 316 36 30 chr5 10645933 10646334 -192439198 - MLT1G1 LTR MaLR -66 529 123 2136 191 14 3 chr5 10646334 10646691 -192438841 + MLT1A1 LTR MaLR 1 361 -4 1436 316 36 30 chr5 10646691 10646815 -192438717 - MLT1G1 LTR MaLR -472 123 1 1197 286 130 12 chr5 10647035 10647542 -192437990 + MLT1F1 LTR MaLR 1 567 0 301 228 65 22 chr5 10647868 10647960 -192437572 + MIR SINE MIR 119 214 -48 300 156 31 0 chr5 10649775 10649839 -192435693 - L1MA7 LINE L1 0 6291 6226 320 356 95 11 chr5 10650152 10650416 -192435116 - L1ME LINE L1 -5526 544 259 2630 208 65 50 chr5 10650724 10651321 -192434211 + MER82 DNA MER2_type 2 607 -46 300 300 36 70 chr5 10651443 10651773 -192433759 - L1MEc LINE L1 -5580 816 498 264 331 61 13 chr5 10652014 10652154 -192433378 - L1MEd LINE L1 -1610 4519 4387 2188 111 0 7 chr5 10652154 10652461 -192433071 - AluSg SINE Alu -5 305 1 264 331 61 13 chr5 10652461 10652631 -192432901 - L1MEd LINE L1 -1742 4387 4194 945 311 136 60 chr5 10652646 10653580 -192431952 - L1MEd LINE L1 -1979 4150 3288 1789 174 7 3 chr5 10653580 10653879 -192431653 + AluJb SINE Alu 1 300 -12 945 311 136 60 chr5 10653879 10654339 -192431193 - L1MEd LINE L1 -2841 3288 2864 2297 104 0 7 chr5 10654339 10654636 -192430896 + AluSg SINE Alu 1 295 -15 945 311 136 60 chr5 10654636 10654845 -192430687 - L1MEd LINE L1 -3265 2864 2425 35 83 0 0 chr5 10654852 10654936 -192430596 + AT_rich Low_complexity Low_complexity 1 84 0 303 246 49 55 chr5 10654971 10655064 -192430468 - L1MEd LINE L1 -3756 2373 2280 1096 224 121 44 chr5 10655064 10655403 -192430129 + MLT1A1 LTR MaLR 1 365 0 303 246 49 55 chr5 10655403 10655492 -192430040 - L1MEd LINE L1 -3849 2280 2192 283 86 0 0 chr5 10655900 10655935 -192429597 + THE1A LTR MaLR 321 355 0 * 816 113 8 6 chr5 10655921 10655935 -192429597 - MSTB LTR MaLR -292 136 124 12771 85 6 2 chr5 10655935 10657509 -192428023 + THE1B-int LTR MaLR 1 1580 0 2128 132 21 66 chr5 10657510 10657890 -192427642 + THE1B LTR MaLR 2 364 0 816 113 8 6 chr5 10657890 10658005 -192427527 - MSTB LTR MaLR -303 125 3 391 377 54 14 chr5 10658125 10658475 -192427057 - L1MEd LINE L1 -5472 647 284 2099 95 6 63 chr5 10658863 10659178 -192426354 - AluSq SINE Alu -12 301 5 417 271 46 30 chr5 10659193 10659427 -192426105 - L1MD3 LINE L1 0 8041 7823 318 269 175 18 chr5 10659530 10659701 -192425831 - L2 LINE L2 -970 2344 2147 199 0 0 61 chr5 10660277 10660310 -192425222 + (CA)n Simple_repeat Simple_repeat 2 32 0 1346 31 9 0 chr5 10661821 10662043 -192423489 + (CTCA)n Simple_repeat Simple_repeat 1 224 0 1558 164 4 14 chr5 10662703 10662978 -192422554 - AluJo SINE Alu -22 290 19 308 24 24 0 chr5 10663286 10663327 -192422205 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 496 269 86 0 chr5 10663734 10663920 -192421612 - LTR16C LTR ERVL -4 487 286 524 222 120 24 chr5 10664616 10664783 -192420749 + MLT1J2 LTR MaLR 1 183 -267 882 256 106 41 chr5 10664930 10665419 -192420113 - LTR33 LTR ERVL 0 521 1 189 299 37 65 chr5 10665844 10665951 -192419581 - L2 LINE L2 -15 3257 3154 2102 111 0 27 chr5 10666159 10666456 -192419076 + AluSg SINE Alu 1 289 -21 285 296 170 18 chr5 10667086 10667309 -192418223 - MIR SINE MIR -2 260 4 309 322 113 0 chr5 10667508 10667623 -192417909 - L2 LINE L2 0 3272 3145 216 67 0 0 chr5 10668174 10668204 -192417328 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr5 10669321 10669343 -192416189 + AT_rich Low_complexity Low_complexity 1 22 0 400 302 118 12 chr5 10669527 10669696 -192415836 + MIR SINE MIR 28 214 -48 191 186 34 34 chr5 10669982 10670041 -192415491 + MIR SINE MIR 87 145 -63 709 276 91 53 chr5 10670340 10670790 -192414742 + MLT1C LTR MaLR 1 467 0 774 290 81 39 chr5 10671024 10671358 -192414174 + L1PA15 LINE L1 408 755 -6032 15221 219 18 24 chr5 10671391 10676960 -192408572 + L1PA15 LINE L1 1262 6815 -1 1499 224 153 20 chr5 10677159 10677303 -192408229 - MLT1D LTR MaLR 0 505 381 186 71 0 0 chr5 10677303 10677331 -192408201 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1499 224 153 20 chr5 10677331 10677632 -192407900 - MLT1D LTR MaLR -124 381 1 1899 147 0 33 chr5 10678643 10678942 -192406590 + AluSx SINE Alu 1 289 -23 3061 169 60 3 chr5 10679388 10679955 -192405577 + MER6A DNA MER2_type 1 599 -6 237 314 19 38 chr5 10680298 10680403 -192405129 + MIR3 SINE MIR 12 114 -94 462 49 0 0 chr5 10680418 10680479 -192405053 + (TG)n Simple_repeat Simple_repeat 2 62 0 2131 108 3 7 chr5 10680498 10680793 -192404739 + AluSg1 SINE Alu 1 294 -15 2464 166 74 21 chr5 10680886 10681320 -192404212 + MSTB2 LTR MaLR 1 457 0 1057 228 58 67 chr5 10681669 10682189 -192403343 + MLT2D LTR ERVL 1 520 0 300 53 0 0 chr5 10682209 10682247 -192403285 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 299 245 19 19 chr5 10682756 10682862 -192402670 + (TA)n Simple_repeat Simple_repeat 2 107 0 673 254 0 0 chr5 10682879 10683005 -192402527 - FLAM_A SINE Alu -3 130 5 189 244 22 0 chr5 10683139 10683184 -192402348 + L2 LINE L2 3258 3303 -10 1672 158 34 4 chr5 10683726 10684041 -192401491 + AluSx SINE Alu 11 333 0 384 209 41 12 chr5 10684464 10684617 -192400915 - L1MA9 LINE L1 -7 6290 6021 21 57 0 0 chr5 10684880 10684915 -192400617 + AT_rich Low_complexity Low_complexity 1 35 0 538 362 33 9 chr5 10685647 10685984 -192399548 + L2 LINE L2 2026 2370 -944 395 287 47 16 chr5 10686082 10686211 -192399321 + MLT1J2 LTR MaLR 13 145 -305 244 241 19 0 chr5 10686293 10686347 -192399185 - L2 LINE L2 -2 3311 3257 325 306 59 41 chr5 10686541 10686711 -192398821 + MIR SINE MIR 7 179 -83 28 61 0 0 chr5 10687976 10688025 -192397507 + AT_rich Low_complexity Low_complexity 1 49 0 322 260 52 0 chr5 10689447 10689543 -192395989 - MER5A DNA MER1_type -80 109 9 521 341 81 47 chr5 10691208 10691309 -192394223 + L2 LINE L2 1791 1887 -1427 1807 148 121 12 chr5 10691309 10691647 -192393885 - THE1C LTR MaLR 0 375 1 521 341 81 47 chr5 10691647 10692260 -192393272 + L2 LINE L2 1887 2530 -784 200 293 88 66 chr5 10692910 10693091 -192392441 + L2 LINE L2 3033 3217 -96 327 322 11 0 chr5 10694779 10694869 -192390663 + MIR3 SINE MIR 75 165 -43 1619 177 67 0 chr5 10694932 10695215 -192390317 - AluJb SINE Alu -2 310 9 191 266 0 47 chr5 10695260 10695324 -192390208 - L2 LINE L2 -4 3268 3208 1455 182 78 4 chr5 10696477 10696746 -192388786 + AluJb SINE Alu 10 298 -14 1253 223 56 68 chr5 10696944 10697408 -192388124 + MLT2D LTR ERVL 1 454 -66 2518 123 62 10 chr5 10697528 10697928 -192387604 + MSTA LTR MaLR 1 421 -7 1465 235 51 8 chr5 10698486 10698860 -192386672 - MLT1C LTR MaLR -75 392 3 22 0 0 0 chr5 10700486 10700508 -192385024 + AT_rich Low_complexity Low_complexity 1 22 0 1517 239 13 32 chr5 10701150 10701522 -192384010 + MLT1A1 LTR MaLR 1 365 0 2079 170 101 0 chr5 10701667 10702055 -192383477 + MSTA LTR MaLR 2 428 0 417 291 35 62 chr5 10703265 10703523 -192382009 - LTR16B LTR ERVL 0 464 214 616 292 62 62 chr5 10703730 10704134 -192381398 - L2 LINE L2 -101 3212 2809 1974 196 65 128 chr5 10704165 10704906 -192380626 - LTR8A LTR ERV1 0 727 34 1098 187 57 30 chr5 10705163 10705393 -192380139 + MER46A DNA MER2_type 1 236 0 21 36 0 0 chr5 10705814 10705842 -192379690 + AT_rich Low_complexity Low_complexity 1 28 0 183 315 62 23 chr5 10706019 10706149 -192379383 - MIR SINE MIR -114 148 14 295 291 51 17 chr5 10706384 10706603 -192378929 - L1 LINE L1 -1687 4459 4234 1092 212 77 90 chr5 10706871 10707314 -192378218 + MLT1D LTR MaLR 69 505 0 314 182 0 0 chr5 10707787 10707842 -192377690 - MLT1K LTR MaLR -20 568 514 555 117 0 36 chr5 10708145 10708256 -192377276 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 195 42 0 0 chr5 10708479 10708503 -192377029 + (TAA)n Simple_repeat Simple_repeat 1 24 0 185 283 0 0 chr5 10708503 10708549 -192376983 - L2 LINE L2 -17 3255 3210 1937 153 134 28 chr5 10708574 10708836 -192376696 + MSTA LTR MaLR 1 319 -109 1902 144 76 51 chr5 10708836 10709191 -192376341 - THE1B LTR MaLR 0 364 1 1937 153 134 28 chr5 10709191 10709315 -192376217 + MSTA LTR MaLR 319 428 0 555 271 0 0 chr5 10709336 10709458 -192376074 - MIR SINE MIR -129 133 12 229 323 96 0 chr5 10709496 10709694 -192375838 - L1 LINE L1 -2168 3978 3762 2784 153 39 37 chr5 10710295 10710483 -192375049 + L1MB3 LINE L1 5606 5792 -391 2223 115 0 0 chr5 10710483 10710787 -192374745 - AluSc SINE Alu -5 304 1 2784 153 39 37 chr5 10710787 10711139 -192374393 + L1MB3 LINE L1 5792 6147 -36 182 330 124 0 chr5 10711171 10711268 -192374264 - MIR SINE MIR -62 146 38 2453 165 19 36 chr5 10711298 10711840 -192373692 + LTR27 LTR ERV1 3 501 0 1046 254 70 53 chr5 10712033 10712392 -192373140 - MLT1A1 LTR MaLR 0 365 1 508 107 63 60 chr5 10713673 10714109 -192371423 + GA-rich Low_complexity Low_complexity 1 437 0 253 158 63 0 chr5 10714142 10714237 -192371295 + (CAGGG)n Simple_repeat Simple_repeat 2 102 0 226 232 63 11 chr5 10714241 10714336 -192371196 + GA-rich Low_complexity Low_complexity 1 100 0 438 203 58 0 chr5 10714678 10715010 -192370522 + GA-rich Low_complexity Low_complexity 1 351 0 2173 143 38 41 chr5 10716816 10717181 -192368351 - THE1B LTR MaLR 0 364 1 345 248 90 28 chr5 10717220 10717365 -192368167 + MIR SINE MIR 61 214 -48 5571 236 72 38 chr5 10717790 10718484 -192367048 + L1MB8 LINE L1 14 683 -6276 315 0 0 0 chr5 10718484 10718519 -192367013 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5571 236 72 38 chr5 10718519 10719565 -192365967 + L1MB8 LINE L1 683 1848 -5111 2201 104 3 0 chr5 10719565 10719862 -192365670 + AluSc SINE Alu 1 298 -11 5571 236 72 38 chr5 10719862 10720385 -192365147 + L1MB8 LINE L1 1848 2352 -4607 366 107 0 0 chr5 10720388 10720444 -192365088 + (CA)n Simple_repeat Simple_repeat 2 57 0 10175 226 69 31 chr5 10720639 10725024 -192360508 + L1MB8 LINE L1 2471 6977 -12 24 32 0 0 chr5 10728606 10728637 -192356895 + AT_rich Low_complexity Low_complexity 1 31 0 271 273 30 20 chr5 10729541 10729640 -192355892 - L3 LINE CR1 -419 1158 1059 1707 236 25 9 chr5 10730203 10730594 -192354938 - MSTD LTR MaLR 0 396 9 588 157 50 41 chr5 10730749 10730870 -192354662 - MLT1A2 LTR MaLR -54 320 199 186 298 12 48 chr5 10731426 10731510 -192354022 - L2 LINE L2 0 3313 3233 1671 266 196 42 chr5 10731847 10733424 -192352108 + HAL1 LINE L1 250 2069 -438 1323 154 0 5 chr5 10733432 10733646 -192351886 + AluSg/x SINE Alu 87 299 -13 243 223 62 77 chr5 10733726 10733856 -192351676 + HAL1 LINE L1 2221 2348 -159 * 468 277 15 0 chr5 10733855 10733985 -192351547 + L1MC5 LINE L1 6698 6829 -1132 903 205 58 99 chr5 10734067 10734384 -192351148 + L1MC5 LINE L1 6858 7157 -804 2486 78 0 0 chr5 10734384 10734690 -192350842 - AluY SINE Alu -5 306 1 903 205 58 99 chr5 10734690 10734767 -192350765 + L1MC5 LINE L1 7157 7236 -725 225 172 78 16 chr5 10735100 10735164 -192350368 + LTR13 LTR ERVK 648 715 -292 4384 112 8 16 chr5 10736394 10737011 -192348521 - MER51A LTR ERV1 0 634 23 1187 331 141 14 chr5 10737656 10738324 -192347208 - L2 LINE L2 -518 2796 2044 377 274 17 28 chr5 10738517 10738696 -192346836 + (CATG)n Simple_repeat Simple_repeat 2 178 0 703 233 181 44 chr5 10739111 10739449 -192346083 - MLT1F1 LTR MaLR -1 541 138 1757 142 36 33 chr5 10739449 10739780 -192345752 - L1MA4A LINE L1 -6 6297 5966 703 233 181 44 chr5 10739780 10739939 -192345593 - MLT1F1 LTR MaLR -404 138 2 225 65 0 0 chr5 10741674 10741705 -192343827 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2305 82 0 0 chr5 10741708 10741989 -192343543 - AluY SINE Alu -30 281 1 2320 78 3 3 chr5 10742787 10743071 -192342461 + AluSp SINE Alu 1 284 -29 185 0 40 0 chr5 10743088 10743113 -192342419 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 306 173 29 0 chr5 10744626 10744775 -192340757 + (TA)n Simple_repeat Simple_repeat 1 153 0 1543 194 0 7 chr5 10746217 10746525 -192339007 + AluJb SINE Alu 1 306 0 210 277 71 45 chr5 10748094 10748249 -192337283 + MIR3 SINE MIR 50 208 0 282 189 11 67 chr5 10748386 10748476 -192337056 + (TAGA)n Simple_repeat Simple_repeat 1 85 0 200 311 0 0 chr5 10749535 10749580 -192335952 - L2 LINE L2 -89 3183 3139 180 0 0 0 chr5 10749606 10749626 -192335906 + (T)n Simple_repeat Simple_repeat 1 20 0 559 203 27 27 chr5 10749916 10750064 -192335468 + LTR67 LTR ERVL 407 554 -3 327 177 0 0 chr5 10750943 10751005 -192334527 + CT-rich Low_complexity Low_complexity 2 63 0 234 245 0 0 chr5 10752653 10752702 -192332830 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 1168 247 150 71 chr5 10753290 10753864 -192331668 + MLT1E2 LTR MaLR 6 624 -2 1346 203 17 24 chr5 10755225 10755521 -192330011 - AluJo SINE Alu -7 295 2 21 0 0 0 chr5 10756244 10756265 -192329267 + AT_rich Low_complexity Low_complexity 1 21 0 214 338 84 33 chr5 10756591 10756804 -192328728 + L3 LINE CR1 653 876 -701 338 234 16 81 chr5 10760015 10760139 -192325393 - L2 LINE L2 0 3313 3198 581 239 28 35 chr5 10760261 10760403 -192325129 + L1MEc LINE L1 431 571 -5825 1771 149 0 31 chr5 10760467 10760818 -192324714 + AluSg SINE Alu 1 342 0 689 274 89 35 chr5 10760829 10761347 -192324185 + L1MEc LINE L1 1315 1860 -4536 472 167 0 12 chr5 10761351 10761435 -192324097 - AluSg/x SINE Alu -20 289 207 1516 150 75 4 chr5 10761451 10761704 -192323828 - AluSx SINE Alu -41 271 1 2417 64 3 22 chr5 10761711 10762022 -192323510 - AluY SINE Alu -6 305 1 1416 111 0 5 chr5 10762150 10762348 -192323184 + AluSg/x SINE Alu 116 312 0 1530 251 52 34 chr5 10762348 10762906 -192322626 + L1MEc LINE L1 2326 2893 -3322 1299 309 108 41 chr5 10762907 10763891 -192321641 - L2 LINE L2 -293 3020 1971 263 319 88 0 chr5 10764160 10764251 -192321281 + MLT1I LTR MaLR 138 236 -173 404 19 38 0 chr5 10764842 10764895 -192320637 - MLT2A2 LTR ERVL 0 453 399 324 167 12 24 chr5 10764895 10764979 -192320553 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 2761 115 0 10 chr5 10764979 10765363 -192320169 - MLT2A2 LTR ERVL -73 380 1 270 0 0 0 chr5 10766541 10766571 -192318961 + (CA)n Simple_repeat Simple_repeat 2 31 0 216 247 194 0 chr5 10766639 10766732 -192318800 - L2 LINE L2 -2 3311 3201 2642 105 13 8 chr5 10767489 10767862 -192317670 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr5 10768430 10768463 -192317069 + AT_rich Low_complexity Low_complexity 1 33 0 604 329 74 18 chr5 10768866 10769310 -192316222 - L1MC/D LINE L1 -2026 5782 5314 402 337 111 49 chr5 10769311 10770071 -192315461 - L1MC/D LINE L1 -866 5280 4474 188 176 28 28 chr5 10770160 10770268 -192315264 + (TATAA)n Simple_repeat Simple_repeat 5 112 0 210 211 0 28 chr5 10770271 10770342 -192315190 + (TTTA)n Simple_repeat Simple_repeat 2 70 0 313 287 43 64 chr5 10770545 10770827 -192314705 - L1MC/D LINE L1 -2022 4124 3849 24 67 0 0 chr5 10771468 10771513 -192314019 + AT_rich Low_complexity Low_complexity 1 45 0 358 291 89 58 chr5 10771614 10771927 -192313605 - L1ME4a LINE L1 -174 5947 5625 282 73 0 0 chr5 10772025 10772066 -192313466 + (TGAA)n Simple_repeat Simple_repeat 3 43 0 768 287 69 28 chr5 10772173 10772519 -192313013 - MLT1I LTR MaLR -2 407 42 189 0 0 0 chr5 10772519 10772540 -192312992 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 768 287 69 28 chr5 10772540 10772583 -192312949 - MLT1I LTR MaLR -367 42 2 214 191 0 0 chr5 10772762 10772804 -192312728 + (TAA)n Simple_repeat Simple_repeat 1 42 0 27 81 0 0 chr5 10773120 10773182 -192312350 + AT_rich Low_complexity Low_complexity 1 62 0 3584 119 6 24 chr5 10773345 10773882 -192311650 - MER1A DNA MER1_type 0 527 1 2443 75 0 0 chr5 10774044 10774336 -192311196 - AluY SINE Alu -19 292 1 1918 153 20 0 chr5 10775394 10775689 -192309843 + AluSx SINE Alu 1 301 -11 336 289 67 21 chr5 10776697 10776891 -192308641 - LTR33 LTR ERVL -304 217 15 360 0 0 0 chr5 10777751 10777791 -192307741 + (CA)n Simple_repeat Simple_repeat 2 41 0 223 239 22 43 chr5 10778631 10778723 -192306809 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 556 301 36 18 chr5 10778807 10779026 -192306506 - LTR16C LTR ERVL 0 491 269 1965 157 7 0 chr5 10779584 10779889 -192305643 - AluSx SINE Alu -5 307 1 272 217 0 12 chr5 10783354 10783437 -192302095 + GA-rich Low_complexity Low_complexity 4 85 0 491 313 124 17 chr5 10787701 10787992 -192297540 - L2 LINE L2 0 3313 2992 325 299 0 9 chr5 10789744 10789851 -192295681 - MIR3 SINE MIR -16 192 87 374 311 11 33 chr5 10790533 10790617 -192294915 + GA-rich Low_complexity Low_complexity 3 87 -91 2092 115 4 4 chr5 10790617 10790920 -192294612 + AluSc SINE Alu 1 303 0 374 311 11 33 chr5 10790920 10791012 -192294520 + GA-rich Low_complexity Low_complexity 87 178 0 331 182 26 0 chr5 10792225 10792302 -192293230 - MER116 DNA Mariner -1 79 1 1366 170 13 9 chr5 10792630 10792860 -192292672 + MLT2B3 LTR ERVL 1 231 -323 326 220 10 0 chr5 10792860 10792960 -192292572 + CT-rich Low_complexity Low_complexity 2 102 0 566 163 11 0 chr5 10792974 10793066 -192292466 + MLT2B3 LTR ERVL 235 327 -227 478 211 8 29 chr5 10793412 10793661 -192291871 + GA-rich Low_complexity Low_complexity 1 243 0 421 281 90 53 chr5 10795132 10795872 -192289660 + L1MEd LINE L1 756 1516 -4613 2036 47 0 28 chr5 10796028 10796283 -192289249 + AluY SINE Alu 64 311 0 360 64 0 0 chr5 10796283 10796330 -192289202 + (TA)n Simple_repeat Simple_repeat 1 47 0 1510 267 100 28 chr5 10796682 10797618 -192287914 + L1MEd LINE L1 2113 3116 -3013 469 113 0 0 chr5 10797632 10797694 -192287838 + AluJ/FLAM SINE Alu 1 62 -250 670 120 0 0 chr5 10798676 10798776 -192286756 - AluSg/x SINE Alu -5 307 208 187 348 130 36 chr5 10798932 10799070 -192286462 - L2 LINE L2 -4 3268 3118 2034 39 0 0 chr5 10799551 10799781 -192285751 - L1PA5 LINE L1 -3 6151 5922 251 242 207 60 chr5 10799957 10800029 -192285503 + HAL1 LINE L1 814 874 -1633 195 42 0 0 chr5 10800029 10800053 -192285479 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 251 242 207 60 chr5 10800053 10800294 -192285238 + HAL1 LINE L1 874 1173 -1334 1251 246 153 25 chr5 10800398 10800837 -192284695 + MLT1D LTR MaLR 3 497 -8 244 263 132 9 chr5 10800852 10800966 -192284566 + HAL1 LINE L1 1276 1403 -1104 587 207 8 0 chr5 10800968 10801089 -192284443 - MSTD LTR MaLR 0 396 275 202 264 128 111 chr5 10801411 10801764 -192283768 - L2 LINE L2 -396 2918 2560 1586 199 38 0 chr5 10803203 10803320 -192282212 + AluJo SINE Alu 1 112 -200 198 0 0 0 chr5 10803320 10803342 -192282190 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1586 199 38 0 chr5 10803342 10803511 -192282021 + AluJo SINE Alu 112 298 -14 974 258 97 52 chr5 10803579 10804017 -192281515 + MLT1C LTR MaLR 5 467 0 304 130 0 0 chr5 10804293 10804339 -192281193 - MADE1 DNA Mariner 0 80 35 2982 199 90 55 chr5 10804724 10805522 -192280010 + LTR1B LTR ERV1 1 826 0 2411 169 0 5 chr5 10805733 10806100 -192279432 - MLT1A1 LTR MaLR 0 365 1 189 375 116 0 chr5 10806596 10806708 -192278824 + L2 LINE L2 3126 3250 -22 1887 129 30 23 chr5 10806752 10807055 -192278477 + AluSx SINE Alu 1 305 -7 1805 142 0 0 chr5 10807055 10807308 -192278224 + AluSx SINE Alu 1 253 -59 402 21 0 0 chr5 10807313 10807360 -192278172 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 485 333 101 16 chr5 10808023 10808341 -192277191 - MLT1L LTR MaLR -44 571 227 560 77 188 51 chr5 10808346 10808444 -192277088 + L1MA7 LINE L1 6156 6274 -17 2056 132 48 38 chr5 10808444 10808815 -192276717 - THE1C LTR MaLR 0 375 1 560 77 188 51 chr5 10808815 10808833 -192276699 + L1MA7 LINE L1 6274 6288 -3 259 179 18 0 chr5 10809228 10809284 -192276248 + LTR33A LTR ERVL 467 523 0 479 271 147 66 chr5 10810073 10810556 -192274976 + LTR33A LTR ERVL 1 522 -1 21 57 0 0 chr5 10811105 10811140 -192274392 + AT_rich Low_complexity Low_complexity 1 35 0 217 135 27 0 chr5 10811399 10811436 -192274096 + CT-rich Low_complexity Low_complexity 2 39 0 269 218 0 69 chr5 10811664 10811751 -192273781 - L1MC4 LINE L1 -1321 6721 6641 180 286 71 12 chr5 10811798 10811882 -192273650 + MIR SINE MIR 97 185 -77 305 138 0 17 chr5 10813222 10813280 -192272252 + (TAA)n Simple_repeat Simple_repeat 3 59 0 250 318 55 46 chr5 10813660 10813847 -192271685 + MIR SINE MIR 9 192 -67 2281 108 0 0 chr5 10814395 10814700 -192270832 + AluSq SINE Alu 1 305 -8 23 0 0 0 chr5 10814834 10814857 -192270675 + AT_rich Low_complexity Low_complexity 1 23 0 662 291 167 25 chr5 10816510 10817202 -192268330 + L2 LINE L2 2360 3147 -166 249 180 0 0 chr5 10817933 10817983 -192267549 + (TATG)n Simple_repeat Simple_repeat 2 51 0 4877 214 24 15 chr5 10818064 10819885 -192265647 - L1P LINE L1 -3638 3159 1326 11586 214 18 29 chr5 10819888 10821120 -192264412 + L1P LINE L1 3152 4397 -2400 1914 141 0 7 chr5 10821120 10821442 -192264090 + AluY SINE Alu 1 320 0 11586 214 18 29 chr5 10821442 10822973 -192262559 + L1P LINE L1 4397 5884 -913 1220 124 27 0 chr5 10822973 10823158 -192262374 + L1PA15 LINE L1 5955 6144 -21 636 335 129 30 chr5 10823664 10824192 -192261340 - L2 LINE L2 -223 3049 2464 410 150 0 0 chr5 10824808 10824868 -192260664 + THE1B LTR MaLR 305 364 0 * 1240 161 187 22 chr5 10824868 10825130 -192260402 - MSTA LTR MaLR -122 306 1 185 283 0 0 chr5 10825155 10825201 -192260331 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 10825201 10825225 -192260307 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 10825448 10825559 -192259973 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 10825862 10825917 -192259615 + MLT1K LTR MaLR 514 568 -20 1005 205 75 110 chr5 10826390 10826843 -192258689 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 10827111 10827330 -192258202 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 10827566 10827696 -192257836 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 10827873 10827901 -192257631 + AT_rich Low_complexity Low_complexity 1 28 0 1084 191 57 30 chr5 10828322 10828552 -192256980 - MER46A DNA MER2_type 0 236 1 1976 195 61 127 chr5 10828809 10829552 -192255980 + LTR8A LTR ERV1 34 727 0 600 295 62 62 chr5 10829583 10829987 -192255545 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 10830194 10830452 -192255080 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 10831663 10832051 -192253481 - MSTA LTR MaLR 0 428 2 1489 242 13 32 chr5 10832196 10832568 -192252964 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 10833210 10833232 -192252300 + AT_rich Low_complexity Low_complexity 1 22 0 1429 241 51 8 chr5 10834861 10835235 -192250297 + MLT1C LTR MaLR 3 392 -75 3497 229 95 19 chr5 10836508 10837698 -192247834 - L1M4 LINE L1 -821 5325 4045 443 303 152 28 chr5 10845042 10845332 -192240200 - L2 LINE L2 -945 2369 2044 372 278 12 29 chr5 10845529 10845702 -192239830 + (CATG)n Simple_repeat Simple_repeat 2 171 0 331 240 10 83 chr5 10845730 10845922 -192239610 + (CATG)n Simple_repeat Simple_repeat 2 179 0 569 325 132 45 chr5 10846565 10847358 -192238174 + L1MC/D LINE L1 4419 5280 -866 243 285 73 28 chr5 10847359 10847538 -192237994 + L1MC/D LINE L1 5314 5500 -2308 920 206 77 111 chr5 10847896 10848348 -192237184 + MLT1D LTR MaLR 69 505 0 232 189 38 0 chr5 10848805 10848858 -192236674 - MLT1K LTR MaLR -20 568 514 459 131 0 30 chr5 10849153 10849252 -192236280 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 333 272 95 55 chr5 10849596 10850220 -192235312 + L1MDa LINE L1 1279 1927 -4613 1929 48 0 36 chr5 10850377 10850620 -192234912 + AluY SINE Alu 64 298 -8 360 64 0 0 chr5 10850620 10850667 -192234865 + (TA)n Simple_repeat Simple_repeat 1 47 0 24 0 0 0 chr5 10850700 10850724 -192234808 + AT_rich Low_complexity Low_complexity 1 24 0 822 147 37 0 chr5 10851104 10851240 -192234292 - L1PA15 LINE L1 -70 6095 5955 6744 195 28 26 chr5 10851240 10852776 -192232756 - L1PA15 LINE L1 -913 5233 3695 1325 116 10 76 chr5 10852828 10853129 -192232403 - AluY SINE Alu -28 283 3 2176 78 14 4 chr5 10853747 10854028 -192231504 - AluSp SINE Alu -29 284 1 381 223 96 0 chr5 10855389 10855483 -192230049 + MER58 DNA MER1_type 1 103 -112 832 292 83 29 chr5 10855618 10856039 -192229493 + MLT1J2 LTR MaLR 4 447 -3 1164 55 0 0 chr5 10856957 10857103 -192228429 - L1P LINE L1 -5999 147 2 225 0 0 0 chr5 10857728 10857753 -192227779 + (TG)n Simple_repeat Simple_repeat 2 26 0 306 338 40 14 chr5 10857753 10857901 -192227631 - L1MC4a LINE L1 -1882 5926 5775 1898 206 64 7 chr5 10858153 10858521 -192227011 + L1M4 LINE L1 4917 5338 -846 1882 55 16 8 chr5 10858521 10858777 -192226755 + L1PA13 LINE L1 5901 6158 -5 1898 206 64 7 chr5 10858777 10859025 -192226507 + L1M4 LINE L1 5338 5570 -614 390 263 16 3 chr5 10859094 10859203 -192226329 + L1M4 LINE L1 5529 5640 -543 25 31 0 0 chr5 10859222 10859254 -192226278 + AT_rich Low_complexity Low_complexity 1 32 0 964 125 7 0 chr5 10859333 10859485 -192226047 + L1M4 LINE L1 5637 5789 -395 307 49 0 0 chr5 10859586 10859627 -192225905 + L1PA3 LINE L1 6112 6152 -3 2555 131 5 0 chr5 10860975 10861348 -192224184 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr5 10862091 10862133 -192223399 + AT_rich Low_complexity Low_complexity 1 42 0 400 318 103 18 chr5 10863802 10864025 -192221507 + MIR SINE MIR 9 250 -12 9915 74 7 37 chr5 10865607 10867526 -192218006 - L1PA7 LINE L1 -5 6149 4295 2293 104 0 0 chr5 10867526 10867823 -192217709 - AluSc SINE Alu -12 297 1 9915 74 7 37 chr5 10867823 10868173 -192217359 - L1PA7 LINE L1 -1859 4295 3936 342 366 137 26 chr5 10869437 10869852 -192215680 + L2 LINE L2 2812 3272 0 601 71 0 0 chr5 10869923 10870027 -192215505 + AluY SINE Alu 197 300 0 198 143 0 0 chr5 10870205 10870240 -192215292 + (TCC)n Simple_repeat Simple_repeat 3 37 0 484 317 12 19 chr5 10870908 10871069 -192214463 + MIR SINE MIR 16 175 -87 523 203 0 0 chr5 10871358 10871491 -192214041 - MER96B DNA MER1_type? -241 176 44 351 211 39 19 chr5 10871515 10871619 -192213913 + MIR SINE MIR 155 260 -2 840 304 103 21 chr5 10873364 10873782 -192211750 + L2 LINE L2 2855 3306 -7 29 70 0 0 chr5 10874092 10874149 -192211383 + AT_rich Low_complexity Low_complexity 1 57 0 446 279 39 26 chr5 10875509 10875663 -192209869 + MIR SINE MIR 34 189 -73 31 58 0 0 chr5 10877873 10877925 -192207607 + AT_rich Low_complexity Low_complexity 1 52 0 227 260 58 29 chr5 10878156 10878260 -192207272 - L1MC/D LINE L1 -1940 5868 5762 1210 212 48 79 chr5 10878270 10878600 -192206932 - MLT1F LTR MaLR -20 522 203 1181 130 27 0 chr5 10928682 10928867 -192156665 - L1PA15 LINE L1 -21 6144 5955 11275 215 17 30 chr5 10928867 10930402 -192155130 - L1P LINE L1 -913 5233 3748 1965 130 0 14 chr5 10930402 10930738 -192154794 - AluY SINE Alu 0 332 1 11275 215 17 30 chr5 10930738 10931970 -192153562 - L1P LINE L1 -2398 3748 2501 4693 216 22 14 chr5 10931973 10933794 -192151738 + L1P LINE L1 1326 3159 -3638 249 180 0 0 chr5 10933875 10933925 -192151607 + (CATA)n Simple_repeat Simple_repeat 2 51 0 546 296 150 25 chr5 10934551 10935348 -192150184 - L2 LINE L2 0 3313 2360 21 0 0 0 chr5 10937001 10937022 -192148510 + AT_rich Low_complexity Low_complexity 1 21 0 2264 108 0 0 chr5 10937156 10937461 -192148071 - AluSq SINE Alu -8 305 1 250 318 55 46 chr5 10938008 10938195 -192147337 - MIR SINE MIR -67 141 9 326 121 0 17 chr5 10938574 10938632 -192146900 + (TTA)n Simple_repeat Simple_repeat 3 59 0 182 182 0 0 chr5 10938956 10938989 -192146543 - L2 LINE L2 -8 3264 3232 187 286 71 12 chr5 10939974 10940058 -192145474 - MIR SINE MIR -77 185 97 232 224 0 71 chr5 10940105 10940190 -192145342 + L1MC4 LINE L1 6641 6719 -1323 217 135 27 0 chr5 10940416 10940453 -192145079 + GA-rich Low_complexity Low_complexity 2 39 0 451 272 144 68 chr5 10941295 10941780 -192143752 - LTR33A LTR ERVL -1 522 1 2312 106 6 3 chr5 10943067 10943378 -192142154 - AluSx SINE Alu 0 312 1 252 100 0 0 chr5 10944638 10944678 -192140854 + (TA)n Simple_repeat Simple_repeat 2 41 0 378 250 23 0 chr5 10944682 10944770 -192140762 + L1MC4 LINE L1 6614 6703 -1339 228 198 0 62 chr5 10944776 10944872 -192140660 + L1MC4 LINE L1 6614 6703 -1339 396 232 21 42 chr5 10944874 10945034 -192140498 + L1MC3 LINE L1 6526 6703 -1139 386 184 0 82 chr5 10945016 10945114 -192140418 + L1MC4 LINE L1 6614 6703 -1339 * 210 171 0 0 chr5 10945118 10945159 -192140373 + (TA)n Simple_repeat Simple_repeat 2 42 0 2564 199 16 40 chr5 10945176 10945212 -192140320 - MLT2B3 LTR ERVL -15 539 504 954 46 46 17 chr5 10945212 10945387 -192140145 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2564 199 16 40 chr5 10945387 10945894 -192139638 - MLT2B3 LTR ERVL -50 504 9 251 250 7 0 chr5 10946831 10946979 -192138553 + (CA)n Simple_repeat Simple_repeat 2 150 0 323 118 20 0 chr5 10947665 10947716 -192137816 - MLT1A1 LTR MaLR -313 52 1 298 294 28 18 chr5 10947810 10947919 -192137613 + MER94 DNA DNA 3 112 -22 1609 135 54 0 chr5 10948015 10948274 -192137258 - AluSx SINE Alu 0 312 40 21 36 0 0 chr5 10949210 10949238 -192136294 + AT_rich Low_complexity Low_complexity 1 28 0 1693 181 23 26 chr5 10951430 10951740 -192133792 + AluJo SINE Alu 1 309 -3 201 178 22 0 chr5 10952344 10952389 -192133143 + L2 LINE L2 3268 3313 0 306 0 0 0 chr5 10954141 10954175 -192131357 + (CA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 10954725 10954748 -192130784 + AT_rich Low_complexity Low_complexity 1 23 0 229 297 33 11 chr5 10955121 10955212 -192130320 - MLT1H LTR MaLR 0 549 457 479 315 81 40 chr5 10957092 10957489 -192128043 + LTR33 LTR ERVL 5 417 -104 3091 168 78 28 chr5 10957513 10957736 -192127796 + MER7C DNA MER2_type 1 211 -2817 188 67 33 0 chr5 10957736 10957766 -192127766 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 3091 168 78 28 chr5 10957766 10958115 -192127417 + MER7C DNA MER2_type 211 602 0 2500 121 3 0 chr5 10958808 10959155 -192126377 - L1PA13 LINE L1 -14 6149 5802 21 57 0 0 chr5 10960522 10960557 -192124975 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr5 10960588 10960642 -192124890 + AT_rich Low_complexity Low_complexity 1 54 0 1613 95 36 0 chr5 10960775 10960997 -192124535 + L1PA10 LINE L1 5935 6164 -4 36 53 0 0 chr5 10961126 10961183 -192124349 + AT_rich Low_complexity Low_complexity 1 57 0 270 285 51 15 chr5 10961316 10961453 -192124079 - MIR SINE MIR -40 222 81 363 23 0 0 chr5 10961468 10961512 -192124020 + (TG)n Simple_repeat Simple_repeat 2 45 0 1369 214 206 3 chr5 10961515 10961893 -192123639 - MLT2B2 LTR ERVL -60 455 1 235 296 0 35 chr5 10962010 10962125 -192123407 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 * 274 275 58 7 chr5 10962066 10962204 -192123328 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 1807 137 63 3 chr5 10962443 10962727 -192122805 - AluJb SINE Alu -11 301 1 12665 176 22 8 chr5 10964125 10965846 -192119686 - L1PB3 LINE L1 0 6154 4460 230 29 59 0 chr5 10965846 10965880 -192119652 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 12665 176 22 8 chr5 10965880 10966285 -192119247 - L1PB3 LINE L1 -1694 4460 4062 1962 138 10 3 chr5 10966285 10966581 -192118951 - AluSg SINE Alu -12 298 1 12665 176 22 8 chr5 10966581 10967924 -192117608 - L1PB3 LINE L1 -2092 4062 2633 1164 221 31 7 chr5 10968196 10968501 -192117031 - L1MB5 LINE L1 0 6180 5867 1097 223 16 27 chr5 10968500 10968756 -192116776 + L1MB5 LINE L1 5625 5877 -297 * 24 0 0 0 chr5 10969139 10969163 -192116369 + AT_rich Low_complexity Low_complexity 1 24 0 246 381 25 8 chr5 10969928 10970046 -192115486 - L2 LINE L2 -2047 1267 1148 2282 112 7 0 chr5 10970060 10970364 -192115168 + AluSg SINE Alu 1 306 -4 1888 184 3 0 chr5 10970382 10970691 -192114841 + AluSx SINE Alu 1 310 -2 1204 275 44 6 chr5 10970802 10971122 -192114410 + LTR16A LTR ERVL 116 447 -3 473 307 70 30 chr5 10971128 10971457 -192114075 + L2 LINE L2 2201 2542 -772 933 250 63 31 chr5 10973045 10973400 -192112132 - MLT2D LTR ERVL -8 389 1 279 371 60 12 chr5 10974080 10974247 -192111285 + MIR3 SINE MIR 3 177 -31 476 296 66 49 chr5 10974355 10974581 -192110951 + MIR SINE MIR 9 238 -24 250 192 207 14 chr5 10974623 10974733 -192110799 + MIR SINE MIR 33 154 -68 275 297 40 20 chr5 10975690 10975791 -192109741 + MIR SINE MIR 50 152 -110 198 370 76 0 chr5 10976661 10976780 -192108752 - L2 LINE L2 -22 3250 3123 21 36 0 0 chr5 10977020 10977048 -192108484 + AT_rich Low_complexity Low_complexity 1 28 0 708 141 62 8 chr5 10977400 10977528 -192108004 - L1MB5 LINE L1 0 6174 6040 2406 72 0 7 chr5 10977669 10977975 -192107557 - AluY SINE Alu -7 304 1 624 51 0 25 chr5 10977975 10978054 -192107478 - AluY SINE Alu -177 134 58 1088 166 59 63 chr5 10978434 10978624 -192106908 - L1MB5 LINE L1 -122 6052 5862 1726 179 43 18 chr5 10978624 10978953 -192106579 + MER1B DNA MER1_type 1 337 0 1088 166 59 63 chr5 10978953 10979033 -192106499 - L1MB5 LINE L1 -312 5862 5783 1079 203 11 103 chr5 10979052 10979431 -192106101 - MLT1B LTR MaLR -32 358 15 1230 199 139 42 chr5 10979449 10979688 -192105844 - L1MB5 LINE L1 -386 5788 5507 2238 125 3 0 chr5 10979688 10979999 -192105533 - AluSx SINE Alu 0 312 1 1230 199 139 42 chr5 10979999 10980091 -192105441 - L1MB5 LINE L1 -667 5507 5425 471 247 61 47 chr5 10980089 10980324 -192105208 - L1MC/D LINE L1 -350 5771 5541 * 3204 199 61 15 chr5 10980527 10981281 -192104251 - L1MB5 LINE L1 -1910 4236 3448 3299 191 30 80 chr5 10981284 10982136 -192103396 + L1PA12 LINE L1 5347 6156 -12 269 250 47 0 chr5 10982465 10982529 -192103003 + L2 LINE L2 2897 2963 -309 636 209 32 0 chr5 10982531 10982674 -192102858 - L1MC4 LINE L1 -964 7062 6884 231 267 0 80 chr5 10982775 10982850 -192102682 + L2 LINE L2 3245 3313 0 1244 209 133 37 chr5 10983527 10983951 -192101581 + MER66A LTR ERV1 97 478 0 239 284 81 20 chr5 10984888 10985036 -192100496 - L1 LINE L1 -1723 4423 4267 2504 284 72 37 chr5 10985941 10987652 -192097880 - L1 LINE L1 -2230 3916 2146 378 260 42 0 chr5 10987673 10987769 -192097763 + MER45A DNA AcHobo 79 178 0 254 254 218 0 chr5 10987917 10988027 -192097505 - MIR SINE MIR -2 260 127 230 341 44 0 chr5 10988054 10988145 -192097387 - MIR SINE MIR -123 139 45 189 0 0 0 chr5 10989342 10989363 -192096169 + (A)n Simple_repeat Simple_repeat 1 21 0 186 43 0 0 chr5 10989779 10989802 -192095730 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1377 112 0 16 chr5 10989822 10990009 -192095523 - AluSx SINE Alu -127 185 2 1023 214 119 35 chr5 10990972 10991320 -192094212 - MER31B LTR ERV1 0 543 74 4131 136 47 16 chr5 10993060 10993738 -192091794 - LTR34 LTR ERV1 0 699 1 25 0 0 0 chr5 10995138 10995163 -192090369 + AT_rich Low_complexity Low_complexity 1 25 0 497 274 80 63 chr5 10995280 10995642 -192089890 + L1ME4a LINE L1 5574 5941 -180 363 282 24 8 chr5 10995835 10995874 -192089658 - L1MA10 LINE L1 -14 6320 6282 1758 252 35 46 chr5 10995874 10996465 -192089067 - L1ME1 LINE L1 -44 6122 5538 6648 92 18 3 chr5 10996491 10997725 -192087807 - L1PA10 LINE L1 0 6168 4917 425 286 86 52 chr5 10997800 10998069 -192087463 - LTR43 LTR ERV1 -145 457 180 988 217 9 9 chr5 10998584 10998796 -192086736 - L1ME1 LINE L1 -629 5537 5326 2618 231 113 86 chr5 10998798 10999049 -192086483 + L1M4 LINE L1 3611 3854 -2292 372 111 0 0 chr5 10999049 10999112 -192086420 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2618 231 113 86 chr5 10999112 10999358 -192086174 + L1M4 LINE L1 3854 4092 -2054 1970 138 3 25 chr5 10999358 10999677 -192085855 - AluSx SINE Alu 0 312 1 2618 231 113 86 chr5 10999677 11000727 -192084805 + L1M4 LINE L1 4092 5335 -811 2219 119 64 9 chr5 11001004 11001348 -192084184 - THE1B LTR MaLR -1 363 1 203 187 40 27 chr5 11002397 11002472 -192083060 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 312 318 30 38 chr5 11002844 11002976 -192082556 - MIR SINE MIR -112 150 20 730 293 127 21 chr5 11002982 11003361 -192082171 - L2 LINE L2 -1 3312 2894 283 275 113 50 chr5 11003669 11003829 -192081703 + MIR3 SINE MIR 13 182 -26 212 100 50 0 chr5 11004779 11004819 -192080713 + (TG)n Simple_repeat Simple_repeat 2 43 0 879 161 6 25 chr5 11005572 11005734 -192079798 - THE1C LTR MaLR 0 375 217 583 162 9 9 chr5 11005738 11005843 -192079689 - THE1C LTR MaLR -321 107 3 354 163 28 0 chr5 11008000 11008072 -192077460 + Tigger4(Zombi) DNA MER2_type -2 2717 -14 1810 166 7 14 chr5 11008346 11008641 -192076891 + AluJb SINE Alu 1 293 -19 709 258 79 97 chr5 11009457 11009965 -192075567 + MLT1F LTR MaLR 28 526 -16 5137 106 13 12 chr5 11010531 11011221 -192074311 - LTR8 LTR ERV1 0 691 1 2314 165 89 50 chr5 11012148 11012681 -192072851 + LTR8A LTR ERV1 1 554 -173 2256 162 77 2 chr5 11012681 11013083 -192072449 + MER57B LTR ERV1 3 434 0 880 222 20 86 chr5 11013896 11014198 -192071334 + MER33 DNA MER1_type 7 288 -36 411 163 163 0 chr5 11014221 11014319 -192071213 + L1MA8 LINE L1 6170 6283 -8 226 131 66 82 chr5 11014324 11014385 -192071147 + MER33 DNA MER1_type 258 317 -7 329 305 207 53 chr5 11014929 11015267 -192070265 - L1ME LINE L1 -5629 441 52 3241 159 19 62 chr5 11015541 11016181 -192069351 - LTR9 LTR ERV1 0 612 1 2044 189 84 25 chr5 11016584 11017200 -192068332 - MER39 LTR ERV1 -5 702 2 281 261 51 72 chr5 11017348 11017486 -192068046 + MLT1H LTR MaLR 37 171 -378 320 287 18 43 chr5 11017592 11017657 -192067875 + MER41B LTR ERV1 54 119 -516 2455 79 0 10 chr5 11017657 11017962 -192067570 + AluY SINE Alu 1 302 -9 320 287 18 43 chr5 11017962 11018145 -192067387 + MER41B LTR ERV1 119 430 -205 250 260 130 41 chr5 11018534 11018657 -192066875 + MLT1H LTR MaLR 400 533 -16 1769 165 9 36 chr5 11018782 11019115 -192066417 + MER65A LTR ERV1 3 326 -119 554 90 51 0 chr5 11019105 11019183 -192066349 + MER51B LTR ERV1 296 377 0 * 1800 199 18 15 chr5 11020827 11021169 -192064363 + MER61A LTR ERV1 1 343 0 4456 133 61 22 chr5 11021169 11021927 -192063605 + MER61A-int LTR ERV1 1 787 -4430 * 26128 98 27 14 chr5 11021912 11025712 -192059820 + MER61A-int LTR ERV1 1320 5216 -1 1913 164 26 23 chr5 11025712 11026054 -192059478 + MER61A LTR ERV1 1 343 0 455 273 62 11 chr5 11026187 11026363 -192059169 - MIR SINE MIR -58 204 20 641 284 39 0 chr5 11026944 11027148 -192058384 + L1ME2 LINE L1 5364 5575 -2210 553 169 0 0 chr5 11027157 11027240 -192058292 + AluJ/FLAM SINE Alu 2 84 -228 282 256 156 11 chr5 11027240 11027330 -192058202 + L1ME2 LINE L1 5573 5675 -489 1670 221 56 25 chr5 11027474 11027923 -192057609 + L1ME2 LINE L1 5683 6145 -19 2092 164 62 34 chr5 11028310 11028726 -192056806 - MSTA LTR MaLR 0 428 1 1422 236 15 18 chr5 11028749 11029143 -192056389 + Charlie1b DNA MER1_type 2 394 -129 26 30 0 0 chr5 11029143 11029176 -192056356 + AT_rich Low_complexity Low_complexity 1 33 0 299 279 52 52 chr5 11029421 11029593 -192055939 + MIR SINE MIR 47 218 -44 201 206 175 16 chr5 11029803 11029866 -192055666 + L2 LINE L2 3200 3272 0 21 57 0 0 chr5 11030149 11030184 -192055348 + AT_rich Low_complexity Low_complexity 1 35 0 2008 186 49 3 chr5 11031860 11032209 -192053323 - MLT1A1 LTR MaLR 0 365 1 189 141 41 59 chr5 11032267 11032437 -192053095 + (TTATA)n Simple_repeat Simple_repeat 3 169 0 * 252 124 87 6 chr5 11032406 11032567 -192052965 + (TA)n Simple_repeat Simple_repeat 1 174 0 28 29 0 0 chr5 11032637 11032672 -192052860 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 74 3 chr5 11033248 11033585 -192051947 + MLT1A1 LTR MaLR 4 364 -1 1612 196 95 83 chr5 11033934 11034000 -192051532 - MLT1D LTR MaLR 0 505 441 2095 113 0 7 chr5 11034000 11034284 -192051248 + AluSx SINE Alu 1 282 -30 1612 196 95 83 chr5 11034284 11034713 -192050819 - MLT1D LTR MaLR -64 441 4 485 117 64 0 chr5 11035452 11035546 -192049986 - L1MA8 LINE L1 -101 6190 6091 571 173 9 0 chr5 11035546 11035640 -192049892 + L1MA8 LINE L1 6179 6289 -2 252 322 9 0 chr5 11035707 11035822 -192049710 + L1MCc LINE L1 1285 1400 -5023 572 223 81 39 chr5 11035831 11036156 -192049376 + MLT1F LTR MaLR 175 542 0 1238 249 36 42 chr5 11036156 11036634 -192048898 + L1ME3A LINE L1 5646 6120 -50 4648 174 111 32 chr5 11038508 11039585 -192045947 - MER52C LTR ERV1 0 1278 116 276 77 0 0 chr5 11040330 11040369 -192045163 + (CA)n Simple_repeat Simple_repeat 2 40 0 2040 148 35 27 chr5 11040731 11041103 -192044429 + THE1C LTR MaLR 1 375 0 402 317 7 21 chr5 11041620 11041762 -192043770 - L2 LINE L2 -1 3312 3173 1113 294 75 21 chr5 11041851 11042408 -192043124 - L2 LINE L2 -413 2901 2315 1285 268 26 52 chr5 11042415 11042878 -192042654 + MLT1C LTR MaLR 10 460 -7 565 283 143 7 chr5 11042892 11043185 -192042347 - L2 LINE L2 -1001 2313 1981 2088 204 20 32 chr5 11043204 11043646 -192041886 + MER70A LTR ERVL 36 472 0 259 284 128 0 chr5 11043723 11043832 -192041700 - L2 LINE L2 -1391 1923 1801 298 320 77 13 chr5 11043947 11044103 -192041429 + L2 LINE L2 2623 2788 -526 366 326 99 38 chr5 11044199 11044648 -192040884 + L1MC/D LINE L1 5269 5743 -419 * 618 225 8 0 chr5 11044625 11044754 -192040778 - L1M2 LINE L1 -494 5818 5689 769 180 0 0 chr5 11044754 11044885 -192040647 + L1MA9 LINE L1 6174 6312 0 746 231 9 59 chr5 11044889 11044977 -192040555 + L1MD1 LINE L1 6033 6124 -118 2264 124 0 0 chr5 11044977 11045283 -192040249 - AluSq SINE Alu -7 306 1 746 231 9 59 chr5 11045283 11045415 -192040117 + L1MD1 LINE L1 6124 6242 0 625 274 96 15 chr5 11045854 11046124 -192039408 - HAL1 LINE L1 -2213 294 3 1866 196 2 45 chr5 11046136 11046533 -192038999 - MLT1B LTR MaLR -8 382 3 1615 180 39 29 chr5 11046849 11047155 -192038377 - AluJb SINE Alu -3 309 1 560 244 77 18 chr5 11047627 11047795 -192037737 - MER45A DNA AcHobo 0 178 1 2356 60 4 0 chr5 11048916 11049236 -192036296 + AluY SINE Alu 1 321 0 3280 149 39 6 chr5 11049933 11050443 -192035089 - MER1A DNA MER1_type 0 527 1 533 233 43 43 chr5 11051047 11051335 -192034197 + MLT1D LTR MaLR 128 505 0 468 218 0 15 chr5 11051859 11051977 -192033555 - L1MC4 LINE L1 -364 7631 7448 270 0 0 0 chr5 11051990 11052020 -192033512 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 211 124 63 chr5 11053231 11053805 -192031727 + MLT1E2 LTR MaLR 2 610 -16 2427 185 57 19 chr5 11055921 11055941 -192029591 - L1MC2 LINE L1 -1 6343 6325 2514 64 0 0 chr5 11055941 11056237 -192029295 - AluY SINE Alu -15 296 1 2427 185 57 19 chr5 11056237 11056747 -192028785 - L1MC2 LINE L1 -19 6325 5793 2029 145 0 0 chr5 11056757 11057054 -192028478 - AluSx SINE Alu -13 299 3 871 127 14 18 chr5 11057068 11057285 -192028247 - L1MC1 LINE L1 -271 6062 5698 2003 102 3 108 chr5 11058025 11058348 -192027184 + AluSq SINE Alu 1 289 -14 13336 207 14 9 chr5 11058506 11058553 -192026979 - L1PA15 LINE L1 -1 6164 6119 2053 144 0 0 chr5 11058553 11058894 -192026638 - AluSx SINE Alu 0 312 1 13336 207 14 9 chr5 11058894 11062237 -192023295 - L1PA15 LINE L1 -46 6119 2761 185 0 40 0 chr5 11062237 11062262 -192023270 + (TTG)n Simple_repeat Simple_repeat 2 27 0 13336 207 14 9 chr5 11062262 11062485 -192023047 - L1PA15 LINE L1 -3404 2761 2540 278 260 91 0 chr5 11064675 11064752 -192020780 - LTR33A LTR ERVL -3 520 437 343 273 78 8 chr5 11064849 11064977 -192020555 - LTR50 LTR ERVL -160 635 499 263 298 142 60 chr5 11065631 11065933 -192019599 - HERVL LTR ERVL -255 5399 5073 1793 327 76 27 chr5 11066013 11067248 -192018284 - HERVL LTR ERVL -1234 4530 3157 21 57 0 0 chr5 11067301 11067336 -192018196 + AT_rich Low_complexity Low_complexity 1 35 0 488 89 40 20 chr5 11067834 11067935 -192017597 + GA-rich Low_complexity Low_complexity 3 105 0 848 110 6 33 chr5 11067935 11068117 -192017415 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 214 184 0 0 chr5 11068117 11068155 -192017377 + GA-rich Low_complexity Low_complexity 2 39 0 1942 191 100 12 chr5 11068161 11068590 -192016942 - MLT1C LTR MaLR 0 467 1 3624 203 44 48 chr5 11068967 11069884 -192015648 - L1MC3 LINE L1 0 7785 6873 1678 197 16 55 chr5 11069884 11070130 -192015402 - MLT1A1 LTR MaLR 0 365 138 1580 221 106 81 chr5 11070130 11070837 -192014695 - LTR8A LTR ERV1 -2 725 1 1678 197 16 55 chr5 11070837 11070970 -192014562 - MLT1A1 LTR MaLR -227 138 1 1216 197 68 17 chr5 11070970 11071265 -192014267 - L1MC3 LINE L1 -936 6849 6540 2933 141 136 2 chr5 11071301 11071825 -192013707 - LTR29 LTR ERV1 -28 594 1 5142 191 55 6 chr5 11071825 11072871 -192012661 - L1MC3 LINE L1 -1242 6543 5446 2723 32 0 0 chr5 11072874 11073185 -192012347 - AluYa5 SINE Alu 0 311 1 226 161 54 54 chr5 11074143 11074199 -192011333 - MLT1-int LTR MaLR -1311 60 5 245 315 69 22 chr5 11074620 11074810 -192010722 - MIR3 SINE MIR -46 216 15 2301 254 63 15 chr5 11076125 11076732 -192008800 - MER92B LTR ERV1 0 636 1 277 297 78 16 chr5 11077993 11078121 -192007411 - L1MDa LINE L1 -4840 1700 1565 2184 223 109 24 chr5 11078273 11078941 -192006591 + MER50 LTR ERV1 10 734 0 2811 187 36 11 chr5 11079343 11079397 -192006135 + MER44D DNA MER2_type 2 53 -2434 4185 99 51 14 chr5 11079397 11079985 -192005547 - MER4B LTR ERV1 0 610 1 2811 187 36 11 chr5 11079985 11080464 -192005068 + MER44D DNA MER2_type 53 603 -2 2242 78 0 11 chr5 11081189 11081496 -192004036 - AluSc SINE Alu 0 304 1 1276 210 4 0 chr5 11082619 11082857 -192002675 - AluJb SINE Alu -73 239 1 652 301 65 16 chr5 11083709 11083955 -192001577 + LTR16B LTR ERVL 196 453 -11 430 304 75 76 chr5 11084238 11085019 -192000513 + L2 LINE L2 2272 3051 -221 255 31 0 0 chr5 11085070 11085102 -192000430 + (TG)n Simple_repeat Simple_repeat 2 33 0 1850 121 0 72 chr5 11085102 11085409 -192000123 - AluSx SINE Alu -27 285 1 187 243 79 121 chr5 11085547 11085687 -191999845 + L3 LINE CR1 1443 1576 -1 399 236 6 51 chr5 11086087 11086265 -191999267 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 1588 259 112 27 chr5 11086753 11087228 -191998304 + MLT1E LTR MaLR 75 589 -4 578 157 0 0 chr5 11087351 11087434 -191998098 + AluS SINE Alu 2 84 -229 3707 130 28 30 chr5 11088234 11088835 -191996697 + MER4A LTR ERV1 1 600 0 21 57 0 0 chr5 11088964 11088999 -191996533 + AT_rich Low_complexity Low_complexity 1 35 0 274 232 0 0 chr5 11089544 11089600 -191995932 + LTR33 LTR ERVL 77 132 -389 2813 107 3 3 chr5 11089754 11090118 -191995414 + THE1B LTR MaLR 1 364 0 244 261 33 11 chr5 11090148 11090240 -191995292 + LTR33 LTR ERVL 397 490 -31 253 342 7 40 chr5 11090242 11090391 -191995141 - MIR SINE MIR -59 203 60 298 316 162 0 chr5 11091115 11091232 -191994300 - L2 LINE L2 -15 3257 3122 2486 91 0 0 chr5 11092827 11093135 -191992397 + AluSx SINE Alu 1 308 -4 762 308 115 16 chr5 11093505 11093950 -191991582 + LTR33 LTR ERVL 24 512 -9 1667 206 41 15 chr5 11095466 11095805 -191989727 - MER7A DNA MER2_type 0 346 1 234 91 0 0 chr5 11095991 11096024 -191989508 + (TA)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr5 11096077 11096099 -191989433 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 462 49 0 0 chr5 11096098 11096159 -191989373 + (GA)n Simple_repeat Simple_repeat 2 62 0 1522 234 105 18 chr5 11097922 11098380 -191987152 - MLT1D LTR MaLR 0 505 8 409 255 56 87 chr5 11098406 11098637 -191986895 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 11099292 11099315 -191986217 + AT_rich Low_complexity Low_complexity 1 23 0 2140 117 0 0 chr5 11099928 11100255 -191985277 + AluSx SINE Alu 1 327 0 224 269 10 0 chr5 11100450 11100554 -191984978 + (TG)n Simple_repeat Simple_repeat 2 106 0 841 239 50 18 chr5 11100902 11101120 -191984412 - MLT1B LTR MaLR 0 390 166 507 157 21 21 chr5 11101122 11101262 -191984270 + CT-rich Low_complexity Low_complexity 1 140 0 1053 140 0 0 chr5 11101268 11101446 -191984086 + (TTC)n Simple_repeat Simple_repeat 3 180 0 236 267 0 0 chr5 11101455 11101515 -191984017 - FLAM SINE Alu -1 132 73 * 764 224 11 38 chr5 11101499 11101682 -191983850 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 11102256 11102630 -191982902 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 11103366 11103501 -191982031 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 11103592 11103805 -191981727 + L1MC1 LINE L1 3895 4111 -2035 383 205 18 35 chr5 11104572 11104807 -191980725 + (TATAA)n Simple_repeat Simple_repeat 1 230 0 228 217 29 0 chr5 11104780 11104849 -191980683 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 11104878 11104915 -191980617 + AT_rich Low_complexity Low_complexity 1 37 0 5354 203 15 16 chr5 11105110 11106113 -191979419 + L1MC1 LINE L1 4819 5821 -512 432 37 0 0 chr5 11106113 11106167 -191979365 + (CA)n Simple_repeat Simple_repeat 1 54 0 5354 203 15 16 chr5 11106167 11106315 -191979217 + L1MC1 LINE L1 5821 5968 -365 2022 152 3 0 chr5 11106315 11106624 -191978908 + AluSx SINE Alu 1 310 -2 5354 203 15 16 chr5 11106624 11106988 -191978544 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 11107072 11107195 -191978337 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 11107195 11107499 -191978033 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 11107499 11107575 -191977957 + MIR SINE MIR 184 262 0 2051 128 25 0 chr5 11108383 11108664 -191976868 + AluSg SINE Alu 5 292 -18 210 118 0 0 chr5 11109135 11109169 -191976363 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 11109170 11109301 -191976231 + L1ME4a LINE L1 5947 6091 -30 185 105 0 26 chr5 11109932 11109970 -191975562 + (TA)n Simple_repeat Simple_repeat 2 38 0 1473 91 21 45 chr5 11110109 11110352 -191975180 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 11111694 11111731 -191973801 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 11111903 11111990 -191973542 + MIR SINE MIR 52 154 -108 816 271 45 16 chr5 11112911 11113280 -191972252 + L1ME LINE L1 498 873 -5197 680 191 58 143 chr5 11115321 11115465 -191970067 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 11115465 11115828 -191969704 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 11115828 11115976 -191969556 - MLT1B LTR MaLR -230 160 1 294 176 22 11 chr5 11116556 11116647 -191968885 + (CA)n Simple_repeat Simple_repeat 2 93 0 508 303 59 17 chr5 11117010 11117248 -191968284 - LTR16C LTR ERVL -94 397 150 1297 163 0 5 chr5 11117327 11117536 -191967996 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 11117550 11117587 -191967945 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 11117822 11118373 -191967159 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 11119300 11119359 -191966173 + L2 LINE L2 3249 3308 -5 1929 104 107 7 chr5 11122640 11122920 -191962612 + AluSx SINE Alu 1 308 -4 766 235 6 0 chr5 11123802 11123964 -191961568 - MLT1E2 LTR MaLR -6 499 337 1152 235 34 53 chr5 11124014 11124392 -191961140 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 11124409 11124745 -191960787 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 11125148 11125301 -191960231 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 11125524 11125631 -191959901 + MER50 LTR ERV1 497 604 -130 907 249 128 21 chr5 11128089 11128418 -191957114 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 11128538 11128646 -191956886 - MLT2C2 LTR ERVL -357 107 1 1441 240 58 17 chr5 11129400 11129817 -191955715 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 11129829 11130011 -191955521 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 11130799 11131092 -191954440 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 11131612 11131649 -191953883 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 11131663 11131765 -191953767 + MIR3 SINE MIR 86 185 -23 407 339 5 16 chr5 11132578 11132770 -191952762 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 11133440 11133507 -191952025 + CT-rich Low_complexity Low_complexity 2 68 0 669 145 51 0 chr5 11135319 11135457 -191950075 + L1MA5 LINE L1 6155 6299 -1 2967 141 65 6 chr5 11135600 11136090 -191949442 - LTR44 LTR ERV1 0 519 1 3096 77 8 2 chr5 11136257 11136659 -191948873 + MLT2A1 LTR ERVL 1 404 -40 648 173 0 0 chr5 11136670 11136820 -191948712 + (TA)n Simple_repeat Simple_repeat 1 150 0 225 140 0 88 chr5 11136843 11136900 -191948632 + LTR66 LTR ERVL 398 449 -161 * 324 98 59 0 chr5 11136883 11136934 -191948598 + MLT2A1 LTR ERVL 391 444 0 273 119 0 0 chr5 11137411 11137453 -191948079 + (TG)n Simple_repeat Simple_repeat 1 42 0 279 54 0 0 chr5 11137912 11137949 -191947583 + (TG)n Simple_repeat Simple_repeat 1 37 0 1548 113 8 8 chr5 11138156 11138395 -191947137 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 11138665 11138689 -191946843 + AT_rich Low_complexity Low_complexity 1 24 0 1397 122 15 5 chr5 11138731 11138936 -191946596 - MER57B LTR ERV1 -227 207 1 1741 195 57 3 chr5 11139146 11139464 -191946068 + MLT1A1 LTR MaLR 9 343 -22 469 162 0 0 chr5 11139631 11139705 -191945827 + FLAM_A SINE Alu 32 105 -37 451 101 0 14 chr5 11140291 11140360 -191945172 - MER4A LTR ERV1 -596 68 1 233 303 0 9 chr5 11140361 11140470 -191945062 - L1MEd LINE L1 -4583 2138 2031 920 96 7 44 chr5 11140476 11140611 -191944921 + FRAM SINE Alu 20 149 -27 274 314 16 21 chr5 11140617 11140811 -191944721 - L1MEd LINE L1 -4550 1990 1798 186 43 0 0 chr5 11140841 11140864 -191944668 + (T)n Simple_repeat Simple_repeat 1 23 0 332 325 22 39 chr5 11140987 11141294 -191944238 - L1MEd LINE L1 -4890 1640 1278 210 37 0 0 chr5 11141307 11141334 -191944198 + (TTG)n Simple_repeat Simple_repeat 1 27 0 191 114 29 0 chr5 11141426 11141461 -191944071 + (TCTA)n Simple_repeat Simple_repeat 4 39 0 250 394 7 19 chr5 11142163 11142318 -191943214 - MER5A DNA MER1_type -36 153 1 252 0 0 0 chr5 11143016 11143044 -191942488 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2200 64 44 17 chr5 11143633 11143930 -191941602 + AluY SINE Alu 1 305 -6 258 156 0 0 chr5 11145553 11145598 -191939934 + GA-rich Low_complexity Low_complexity 2 46 0 291 54 0 0 chr5 11146406 11146443 -191939089 + (CA)n Simple_repeat Simple_repeat 2 38 0 1047 202 40 0 chr5 11146460 11146658 -191938874 - MER20 DNA MER1_type -9 210 5 2176 129 26 6 chr5 11146708 11147050 -191938482 + MER49 LTR ERV1 10 358 -565 931 189 0 11 chr5 11147050 11147230 -191938302 + MER49 LTR ERV1 746 923 0 212 364 31 8 chr5 11147605 11147734 -191937798 - MIR SINE MIR -111 151 20 204 132 26 0 chr5 11148599 11148637 -191936895 + CT-rich Low_complexity Low_complexity 2 40 0 285 29 0 0 chr5 11148637 11148671 -191936861 + (CA)n Simple_repeat Simple_repeat 1 34 0 571 227 244 27 chr5 11150528 11151020 -191934512 - LTR50 LTR ERVL -4 791 83 260 243 21 7 chr5 11152327 11152471 -191933061 + (CA)n Simple_repeat Simple_repeat 1 146 0 2548 164 67 61 chr5 11155263 11155885 -191929647 - L1MC1 LINE L1 -1 6332 5710 221 278 19 0 chr5 11156048 11156102 -191929430 + L2 LINE L2 3006 3060 -253 24 0 0 0 chr5 11156426 11156450 -191929082 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 11156614 11156637 -191928895 + AT_rich Low_complexity Low_complexity 1 23 0 1058 214 34 8 chr5 11156677 11156911 -191928621 - MLT1G LTR MaLR 0 590 351 1503 186 84 12 chr5 11156984 11157317 -191928215 - MLT1A1 LTR MaLR 0 365 9 621 228 28 62 chr5 11157318 11157529 -191928003 - MLT1G LTR MaLR -391 204 1 23 0 0 0 chr5 11157640 11157663 -191927869 + AT_rich Low_complexity Low_complexity 1 23 0 1104 173 309 19 chr5 11158503 11158851 -191926681 + MER31B LTR ERV1 6 505 -9 1175 160 5 0 chr5 11158954 11159142 -191926390 - MSTB LTR MaLR -235 191 3 9269 180 21 8 chr5 11159144 11160774 -191924758 - MSTB-int LTR MaLR 0 1651 1 2113 185 28 28 chr5 11160778 11161200 -191924332 - MSTB LTR MaLR -3 423 2 304 325 126 15 chr5 11161778 11161984 -191923548 - LTR33 LTR ERVL 0 521 293 208 250 11 11 chr5 11162427 11162435 -191923097 + (TA)n Simple_repeat Simple_repeat 2 9 -80 2392 87 0 3 chr5 11162435 11162747 -191922785 - AluY SINE Alu 0 311 1 208 250 11 11 chr5 11162747 11162826 -191922706 + (TA)n Simple_repeat Simple_repeat 8 89 0 252 350 26 8 chr5 11163208 11163325 -191922207 - L2 LINE L2 -4 3268 3150 27 29 0 0 chr5 11163977 11164011 -191921521 + AT_rich Low_complexity Low_complexity 1 34 0 2450 96 0 3 chr5 11164364 11164677 -191920855 - AluSp SINE Alu -1 312 1 1735 250 53 21 chr5 11165277 11166108 -191919424 + L1ME2 LINE L1 4905 5768 -396 1111 209 34 47 chr5 11166110 11166406 -191919126 + L1ME2 LINE L1 5863 6154 -10 1984 219 35 22 chr5 11166458 11166947 -191918585 - MLT1D LTR MaLR -8 497 3 493 289 41 5 chr5 11167240 11167437 -191918095 - MER114 LTR ERV 0 648 445 955 239 15 31 chr5 11167544 11167989 -191917543 - L1ME2 LINE L1 -118 6046 5515 697 225 127 12 chr5 11167989 11168242 -191917290 - MER114 LTR ERV -366 282 1 2385 90 3 0 chr5 11168337 11168637 -191916895 + AluSp SINE Alu 1 301 -12 629 319 86 0 chr5 11169181 11169391 -191916141 - LTR16A LTR ERVL 0 450 223 288 359 23 0 chr5 11169426 11169554 -191915978 - LTR16A LTR ERVL -304 146 16 25 31 0 0 chr5 11171799 11171831 -191913701 + AT_rich Low_complexity Low_complexity 1 32 0 1799 147 0 4 chr5 11174752 11175010 -191910522 + AluSx SINE Alu 36 292 -20 412 257 73 0 chr5 11175424 11175560 -191909972 - L1ME3A LINE L1 -317 5922 5777 268 273 70 21 chr5 11175580 11175723 -191909809 - L1ME3A LINE L1 -554 5685 5536 243 251 80 68 chr5 11175772 11175810 -191909722 - L1ME3A LINE L1 -1553 4662 4626 1959 144 18 37 chr5 11175810 11176192 -191909340 + THE1C LTR MaLR 1 375 0 243 251 80 68 chr5 11176192 11176316 -191909216 - L1ME3A LINE L1 -1589 4626 4498 325 286 42 60 chr5 11176337 11176383 -191909149 - L1MEc LINE L1 -3903 2316 2271 1609 145 64 28 chr5 11176383 11176665 -191908867 - AluJb SINE Alu -20 292 1 325 286 42 60 chr5 11176665 11176956 -191908576 - L1MEc LINE L1 -3948 2271 2016 315 281 189 18 chr5 11176992 11177273 -191908259 - L1MEc LINE L1 -4441 1955 1627 228 189 0 0 chr5 11177502 11177539 -191907993 - L1P LINE L1 -1225 4921 4885 188 309 107 0 chr5 11178052 11178136 -191907396 - MIR SINE MIR -130 132 40 826 186 6 19 chr5 11178669 11178825 -191906707 - MLT1D LTR MaLR -351 154 1 473 250 0 0 chr5 11178835 11178939 -191906593 + L1MC5 LINE L1 7315 7418 -543 239 274 128 10 chr5 11181541 11181643 -191903889 - MIR SINE MIR -110 152 39 547 258 84 50 chr5 11181646 11181853 -191903679 + LTR16A1 LTR ERVL 16 214 -243 1884 211 8 6 chr5 11181853 11182217 -191903315 + MLT1A1 LTR MaLR 1 365 0 547 258 84 50 chr5 11182217 11182392 -191903140 + LTR16A1 LTR ERVL 214 456 -1 839 338 42 11 chr5 11182393 11182840 -191902692 + HERV16 LTR ERVL 1 461 -4535 814 323 73 46 chr5 11182872 11183994 -191901538 + ERVL LTR ERVL 3841 5021 -743 873 270 41 55 chr5 11184443 11184902 -191900630 + LTR16A1 LTR ERVL 1 453 -4 30 45 0 0 chr5 11186187 11186231 -191899301 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 11186558 11186579 -191898953 + AT_rich Low_complexity Low_complexity 1 21 0 234 220 38 8 chr5 11186783 11186915 -191898617 + (TA)n Simple_repeat Simple_repeat 2 137 0 2255 156 80 3 chr5 11186924 11187314 -191898218 - MSTA LTR MaLR 0 428 9 250 259 104 50 chr5 11187348 11187568 -191897964 - L1M4 LINE L1 -2370 3776 3545 286 294 112 36 chr5 11187697 11188170 -191897362 - L1M4 LINE L1 -2782 3364 2856 2649 20 0 3 chr5 11188262 11188558 -191896974 + AluY SINE Alu 1 295 -16 3433 192 61 9 chr5 11188813 11190167 -191895365 - L1MA9 LINE L1 -113 6199 4772 810 186 35 66 chr5 11190308 11190534 -191894998 + MER20 DNA MER1_type 1 219 0 1688 227 30 35 chr5 11191097 11191559 -191893973 + L1MB5 LINE L1 5714 6173 -1 2440 126 27 10 chr5 11191569 11191975 -191893557 + L1MA3 LINE L1 5893 6305 0 1757 171 105 0 chr5 11193453 11193758 -191891774 - MER1B DNA MER1_type 0 337 1 1932 112 7 0 chr5 11193797 11194075 -191891457 + L1PA12 LINE L1 5748 6027 -141 1960 113 17 125 chr5 11194369 11194777 -191890755 + THE1B LTR MaLR 1 364 0 1314 160 22 9 chr5 11195031 11195262 -191890270 - MLT1C LTR MaLR -233 234 1 1643 115 0 49 chr5 11195331 11195618 -191889914 - AluSx SINE Alu -16 296 24 10390 98 25 16 chr5 11196235 11197819 -191887713 - HERVH LTR ERV1 -6114 1599 1 3473 62 5 7 chr5 11197821 11198270 -191887262 - LTR7 LTR ERV1 -2 448 1 2478 144 10 5 chr5 11198270 11198659 -191886873 - L1PA15 LINE L1 -260 5905 5515 321 96 19 0 chr5 11198656 11198708 -191886824 + L1PA15 LINE L1 5474 5526 -642 * 694 292 116 10 chr5 11198961 11199411 -191886121 + MLT1G LTR MaLR 13 549 -41 626 349 7 0 chr5 11199652 11199921 -191885611 - L1ME LINE L1 -356 5765 5495 1986 108 36 29 chr5 11200325 11200631 -191884901 + AluSx SINE Alu 1 308 -4 9935 96 11 12 chr5 11200832 11202253 -191883279 + HERVH LTR ERV1 1569 2987 -4726 812 169 20 0 chr5 11202247 11202395 -191883137 + HERVH LTR ERV1 3140 3290 -4423 * 3334 122 6 2 chr5 11202385 11202885 -191882647 + HERVH LTR ERV1 3492 3993 -3720 4386 144 3 1 chr5 11202887 11203548 -191881984 + HERVH LTR ERV1 4488 5149 -2564 902 113 7 13 chr5 11203549 11203699 -191881833 + HERVH LTR ERV1 5600 5748 -1965 1850 74 8 0 chr5 11203730 11203988 -191881544 + HERVH LTR ERV1 7429 7688 -25 1603 143 32 11 chr5 11203997 11204018 -191881514 + L1PA15 LINE L1 5880 5899 -266 3482 64 0 9 chr5 11204018 11204470 -191881062 + LTR7 LTR ERV1 1 448 -2 1603 143 32 11 chr5 11204470 11204728 -191880804 + L1PA15 LINE L1 5899 6165 0 2534 153 70 98 chr5 11205257 11205990 -191879542 - LTR8A LTR ERV1 0 691 1 420 167 0 0 chr5 11206540 11206606 -191878926 + MER41C LTR ERV1 1 66 -488 273 111 0 0 chr5 11206602 11206638 -191878894 + MER41C LTR ERV1 25 60 -494 * 300 116 23 0 chr5 11206638 11206681 -191878851 + MER41C LTR ERV1 23 66 -488 243 111 28 0 chr5 11206677 11206713 -191878819 + MER41C LTR ERV1 25 61 -493 * 3138 131 82 0 chr5 11206713 11207203 -191878329 + MER41C LTR ERV1 25 554 0 251 237 31 82 chr5 11207229 11207326 -191878206 + MIR SINE MIR 92 183 -79 248 278 67 0 chr5 11207426 11207516 -191878016 - MER117 DNA MER1_type -37 160 65 2279 98 3 0 chr5 11208235 11208541 -191876991 - AluSp SINE Alu -6 307 1 2505 116 16 8 chr5 11208943 11209315 -191876217 + THE1C LTR MaLR 1 375 0 10410 116 30 15 chr5 11209315 11210872 -191874660 + THE1C-int LTR MaLR 1 1580 0 2560 116 14 5 chr5 11210872 11211243 -191874289 + THE1C LTR MaLR 1 374 -1 243 231 81 46 chr5 11211644 11211817 -191873715 + L1MCc LINE L1 1291 1469 -4954 320 241 43 43 chr5 11211942 11212058 -191873474 + L1MCc LINE L1 1907 2022 -4919 216 0 0 0 chr5 11212060 11212084 -191873448 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5492 116 39 5 chr5 11212086 11212765 -191872767 - L1PA13 LINE L1 -11 6152 5497 2249 87 3 6 chr5 11212765 11213077 -191872455 - AluY SINE Alu 0 311 1 5492 116 39 5 chr5 11213077 11213786 -191871746 - L1PA13 LINE L1 -666 5497 4757 22 0 0 0 chr5 11213929 11213951 -191871581 + AT_rich Low_complexity Low_complexity 1 22 0 1638 163 3 26 chr5 11214085 11214391 -191871141 - AluJo SINE Alu -13 299 1 316 266 36 27 chr5 11214414 11214525 -191871007 + MIR SINE MIR 16 122 -93 3356 286 171 29 chr5 11214550 11216506 -191869026 + L2 LINE L2 1060 3312 -1 293 230 127 56 chr5 11217119 11217245 -191868287 - MIR3 SINE MIR -51 157 23 215 234 78 52 chr5 11217784 11217861 -191867671 + MIR SINE MIR 61 139 -69 698 208 127 34 chr5 11217995 11218382 -191867150 + MER31B LTR ERV1 1 543 0 1344 235 87 20 chr5 11220133 11220571 -191864961 + MLT1C LTR MaLR 1 467 0 1702 231 62 9 chr5 11221120 11221557 -191863975 - MLT1C LTR MaLR 0 467 8 23 33 0 0 chr5 11223308 11223338 -191862194 + AT_rich Low_complexity Low_complexity 1 30 0 1528 294 63 10 chr5 11223932 11224157 -191861375 - L1ME3A LINE L1 0 6170 5946 579 292 153 44 chr5 11224157 11224686 -191860846 - L1MB4 LINE L1 -259 5921 5451 2879 158 68 2 chr5 11224686 11225213 -191860319 - MER34B LTR ERV1 0 565 4 579 292 153 44 chr5 11225213 11225779 -191859753 - L1MB4 LINE L1 -729 5451 4685 22 0 0 0 chr5 11225803 11225825 -191859707 + AT_rich Low_complexity Low_complexity 1 22 0 1929 109 37 3 chr5 11225827 11226121 -191859411 - AluSg SINE Alu -6 304 1 798 214 11 21 chr5 11226139 11226326 -191859206 - MLT1A2 LTR MaLR -1 373 189 187 354 12 24 chr5 11234094 11234176 -191851356 + L2 LINE L2 2875 2955 -359 2620 78 8 30 chr5 11234662 11235034 -191850498 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr5 11235903 11235923 -191849609 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 323 261 30 36 chr5 11236531 11236696 -191848836 - L1ME4a LINE L1 -1 6120 5957 383 302 188 0 chr5 11236907 11237056 -191848476 - MIR SINE MIR -19 243 67 2129 96 7 3 chr5 11237216 11237518 -191848014 - AluSg SINE Alu -7 303 1 278 261 0 29 chr5 11239206 11239275 -191846257 + L2 LINE L2 3239 3305 -8 1668 182 72 36 chr5 11240254 11240617 -191844915 + MLT1C LTR MaLR 1 376 -91 907 167 94 42 chr5 11240616 11240808 -191844724 + MLT1C LTR MaLR 266 467 0 * 1805 89 15 74 chr5 11243294 11243618 -191841914 + AluY SINE Alu 1 305 -6 1695 113 19 30 chr5 11243921 11244223 -191841309 + AluSq SINE Alu 24 322 0 1831 151 46 40 chr5 11245159 11245530 -191840002 + THE1C LTR MaLR 1 373 -2 544 126 0 23 chr5 11245536 11245623 -191839909 + THE1C-int LTR MaLR 4 88 -1492 * 1355 106 21 0 chr5 11245597 11245785 -191839747 + THE1C-int LTR MaLR 891 1082 -498 241 167 0 42 chr5 11245785 11245833 -191839699 + MSTB LTR MaLR 381 426 0 933 240 4 39 chr5 11246041 11246270 -191839262 + MER58A DNA MER1_type 4 224 0 259 366 43 6 chr5 11246331 11246495 -191839037 + MIR SINE MIR 67 236 -26 1394 157 15 168 chr5 11247427 11247480 -191838052 - MLT2D LTR ERVL -3 394 335 261 0 0 0 chr5 11247480 11247509 -191838023 + (CA)n Simple_repeat Simple_repeat 2 30 0 1394 157 15 168 chr5 11247509 11247789 -191837743 - MLT2D LTR ERVL -62 335 111 5262 165 30 24 chr5 11247803 11249063 -191836469 - L1MA7 LINE L1 -5 6286 5020 565 158 61 0 chr5 11249065 11249179 -191836353 - MLT2D LTR ERVL -293 121 1 2076 177 3 0 chr5 11249183 11249527 -191836005 - MER7A DNA MER2_type 0 346 4 428 328 62 29 chr5 11249830 11250071 -191835461 + MIR SINE MIR 2 250 -12 472 252 171 85 chr5 11251064 11251499 -191834033 + L1ME LINE L1 858 1339 -5033 317 248 69 0 chr5 11251521 11251647 -191833885 + L1ME LINE L1 1269 1568 -4977 2493 255 90 25 chr5 11252689 11253677 -191831855 - L1MC4a LINE L1 -35 7773 6722 273 260 65 32 chr5 11255286 11255409 -191830123 - L2 LINE L2 -25 3288 3162 2269 70 0 10 chr5 11255857 11256157 -191829375 - AluY SINE Alu -14 297 1 181 295 62 47 chr5 11256179 11256308 -191829224 - L2 LINE L2 -725 2589 2459 320 247 84 101 chr5 11256622 11256800 -191828732 - HAL1 LINE L1 -1231 1276 1102 222 237 0 82 chr5 11256869 11256966 -191828566 + C-rich Low_complexity Low_complexity 3 91 0 2089 109 13 3 chr5 11260604 11260906 -191824626 + AluSx SINE Alu 1 305 -7 184 329 73 12 chr5 11261273 11261355 -191824177 - MIR SINE MIR -79 183 97 2004 106 0 4 chr5 11262676 11262951 -191822581 - AluSg SINE Alu -19 291 18 700 276 61 82 chr5 11263353 11264009 -191821523 + L1MEd LINE L1 457 1098 -5021 2035 190 55 65 chr5 11264597 11265102 -191820430 + MLT2B3 LTR ERVL 1 500 -54 195 175 0 0 chr5 11265105 11265162 -191820370 + A-rich Low_complexity Low_complexity 1 57 0 393 121 0 30 chr5 11265163 11265229 -191820303 + MLT2A2 LTR ERVL 390 453 0 786 237 62 126 chr5 11266191 11267027 -191818505 + L1ME2 LINE L1 854 1851 -4756 * 1583 192 60 6 chr5 11267016 11267365 -191818167 + L1MD1 LINE L1 5875 6242 0 358 284 5 59 chr5 11267361 11267451 -191818081 + L1ME2 LINE L1 1839 1932 -4675 * 1942 151 0 6 chr5 11267451 11267763 -191817769 + AluSx SINE Alu 1 310 -2 358 284 5 59 chr5 11267763 11267876 -191817656 + L1ME2 LINE L1 1932 2031 -4576 1934 170 89 25 chr5 11268267 11268672 -191816860 + Tigger2a DNA MER2_type 1 431 -3 603 238 72 18 chr5 11268724 11268947 -191816585 + L1ME2 LINE L1 5209 5443 -983 904 188 4 2 chr5 11268953 11269199 -191816333 + AluJb SINE Alu 2 295 -17 1396 254 48 8 chr5 11269202 11269719 -191815813 + L1ME2 LINE L1 5450 5987 -457 414 349 9 5 chr5 11269791 11270006 -191815526 + L1ME2 LINE L1 6122 6337 -107 1955 197 48 5 chr5 11270375 11270771 -191814761 + MLT2C2 LTR ERVL 4 416 -48 183 184 0 0 chr5 11270776 11270814 -191814718 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 249 65 0 0 chr5 11270822 11270853 -191814679 - MLT2C2 LTR ERVL 0 464 434 266 174 0 0 chr5 11270873 11270919 -191814613 + MLT2C2 LTR ERVL 509 554 0 342 343 30 18 chr5 11273278 11273447 -191812085 + MIR SINE MIR 86 256 -6 21 0 0 0 chr5 11275088 11275109 -191810423 + AT_rich Low_complexity Low_complexity 1 21 0 1854 108 36 33 chr5 11275230 11275536 -191809996 - AluSx SINE Alu -5 307 1 622 349 7 0 chr5 11275941 11276210 -191809322 + L1ME LINE L1 5495 5765 -356 698 261 113 8 chr5 11276449 11276706 -191808826 - MLT1G LTR MaLR -41 549 266 275 243 43 0 chr5 11276829 11276899 -191808633 - MLT1G LTR MaLR -505 85 13 321 96 19 0 chr5 11277151 11277203 -191808329 - L1PA15 LINE L1 -642 5526 5474 3957 136 20 15 chr5 11277203 11277589 -191807943 + L1PA15 LINE L1 5515 5910 -255 3492 64 0 9 chr5 11277589 11278041 -191807491 + LTR7 LTR ERV1 1 448 -2 3957 136 20 15 chr5 11278041 11278299 -191807233 + L1PA15 LINE L1 5910 6165 0 2672 152 67 97 chr5 11278828 11279563 -191805969 - LTR8A LTR ERV1 0 691 1 238 345 9 9 chr5 11279863 11279973 -191805559 + CT-rich Low_complexity Low_complexity 1 110 0 370 274 12 41 chr5 11280006 11280216 -191805316 + CT-rich Low_complexity Low_complexity 1 203 0 302 229 57 0 chr5 11281151 11281221 -191804311 - MER5A DNA MER1_type -71 118 45 984 118 11 17 chr5 11282005 11282011 -191803521 + (TTCC)n Simple_repeat Simple_repeat 1 182 0 984 118 11 17 chr5 11282011 11282189 -191803343 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 327 342 185 14 chr5 11283542 11284056 -191801476 + L2 LINE L2 2174 2775 -539 237 286 69 51 chr5 11284131 11284306 -191801226 + L2 LINE L2 2912 3089 -224 21 0 0 0 chr5 11284856 11284877 -191800655 + AT_rich Low_complexity Low_complexity 1 21 0 395 60 0 150 chr5 11286766 11286899 -191798633 + AluY SINE Alu 1 113 -188 277 43 43 0 chr5 11287159 11287206 -191798326 + (CA)n Simple_repeat Simple_repeat 2 50 0 1096 148 9 33 chr5 11290698 11290908 -191794624 + AluSx SINE Alu 11 215 -97 882 122 27 40 chr5 11293630 11293778 -191791754 - THE1B LTR MaLR -218 146 1 370 257 88 27 chr5 11293814 11293962 -191791570 + MIR SINE MIR 58 214 -48 1614 238 60 47 chr5 11294387 11294854 -191790678 + L1M4 LINE L1 14 486 -6373 3078 216 90 27 chr5 11295001 11296060 -191789472 + L1M4 LINE L1 5083 6219 -766 1613 82 41 15 chr5 11301424 11301569 -191783963 - AluY SINE Alu -36 275 118 301 43 43 0 chr5 11301569 11301616 -191783916 + (TG)n Simple_repeat Simple_repeat 2 50 0 1613 82 41 15 chr5 11301616 11301738 -191783794 - AluY SINE Alu -193 118 1 236 314 97 0 chr5 11302315 11302439 -191783093 - MIR SINE MIR -68 194 59 229 301 57 24 chr5 11302371 11302494 -191783038 - L2 LINE L2 -355 2959 2833 * 216 184 0 0 chr5 11304708 11304746 -191780786 + GA-rich Low_complexity Low_complexity 1 38 0 2175 181 103 30 chr5 11308350 11308811 -191776721 - THE1-int LTR MaLR -575 1005 498 2088 154 0 0 chr5 11308811 11309122 -191776410 - AluSx SINE Alu -1 311 1 2175 181 103 30 chr5 11309122 11309192 -191776340 - THE1-int LTR MaLR -1082 498 435 3133 191 50 24 chr5 11311967 11312633 -191772899 - MLT1A2-int LTR MaLR -1052 683 1 309 259 82 0 chr5 11312663 11312748 -191772784 - MLT2B1 LTR ERVL -59 461 370 1627 115 83 40 chr5 11312759 11313037 -191772495 + MER4D LTR ERV1 141 430 -442 221 95 0 24 chr5 11315802 11315844 -191769688 + (GAAAA)n Simple_repeat Simple_repeat 4 44 0 299 245 19 19 chr5 11316352 11316458 -191769074 + (TA)n Simple_repeat Simple_repeat 2 107 0 610 244 0 8 chr5 11316474 11316601 -191768931 - FLAM_A SINE Alu -3 130 5 1310 169 19 8 chr5 11317257 11317518 -191768014 + ERVL-B1 LTR ERVL 5492 5755 -9 1877 209 95 35 chr5 11317520 11317949 -191767583 + MLT2B1 LTR ERVL 1 460 -60 186 43 0 0 chr5 11317949 11317972 -191767560 + (TC)n Simple_repeat Simple_repeat 2 24 0 1877 209 95 35 chr5 11317972 11317996 -191767536 + MLT2B1 LTR ERVL 460 481 -39 1401 270 87 34 chr5 11318498 11319946 -191765586 + L1MEc LINE L1 1313 2800 -3415 188 237 34 17 chr5 11320379 11320438 -191765094 + MIR SINE MIR 87 146 -62 1274 226 43 48 chr5 11320673 11321045 -191764487 - MLT1A2 LTR MaLR -1 373 4 806 185 14 7 chr5 11321675 11321821 -191763711 - AluJb SINE Alu -162 150 4 6582 68 12 19 chr5 11321874 11323046 -191762486 - L1PA7 LINE L1 -2 6152 4997 265 224 45 0 chr5 11323888 11323955 -191761577 - MIR SINE MIR -91 171 102 3198 177 2 104 chr5 11324425 11325311 -191760221 + L1P LINE L1 3843 4638 -1508 219 223 42 42 chr5 11325587 11325753 -191759779 + (CACAC)n Simple_repeat Simple_repeat 5 170 0 460 296 115 27 chr5 11326176 11326848 -191758684 + L1MEd LINE L1 965 1737 -4573 1955 159 0 7 chr5 11326990 11327292 -191758240 - AluJb SINE Alu -12 300 1 294 260 52 0 chr5 11329101 11329197 -191756335 + MER5A DNA MER1_type 9 109 -80 7224 92 14 11 chr5 11329690 11330668 -191754864 + MSTA-int LTR MaLR 592 1572 -8 572 171 0 27 chr5 11330694 11330805 -191754727 + MSTA LTR MaLR 9 116 -312 416 143 0 0 chr5 11330792 11330855 -191754677 + MSTA LTR MaLR 366 428 0 * 244 354 77 0 chr5 11330855 11330985 -191754547 - MIR SINE MIR -115 147 8 2639 113 10 3 chr5 11331420 11331811 -191753721 - L1PA11 LINE L1 -235 5939 5546 901 218 32 18 chr5 11331813 11332033 -191753499 - MIR SINE MIR -35 227 5 529 323 11 5 chr5 11333355 11333541 -191751991 - MIR SINE MIR -48 214 28 525 233 125 8 chr5 11333648 11333768 -191751764 + MER63 DNA MER1_type 1 760 -302 3052 66 47 0 chr5 11334213 11334697 -191750835 - L1P2 LINE L1 -682 5473 4966 1525 107 5 5 chr5 11334697 11334913 -191750619 + THE1C LTR MaLR 160 375 0 248 175 87 87 chr5 11335131 11335234 -191750298 + L3 LINE CR1 1192 1294 -283 1906 129 11 0 chr5 11335235 11335513 -191750019 - AluSx SINE Alu -1 311 31 199 0 0 61 chr5 11335939 11335972 -191749560 + (TG)n Simple_repeat Simple_repeat 2 32 0 272 269 175 18 chr5 11336544 11336715 -191748817 + L2 LINE L2 2147 2344 -970 347 256 46 73 chr5 11336823 11337042 -191748490 + L1MC4 LINE L1 7823 8035 -7 285 100 0 0 chr5 11337075 11337115 -191748417 + Alu SINE Alu 5 44 -256 200 57 0 57 chr5 11337311 11337346 -191748186 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 258 247 185 0 chr5 11338655 11338736 -191746796 + MARNA DNA Mariner 265 360 -226 21 82 0 0 chr5 11338761 11338810 -191746722 + AT_rich Low_complexity Low_complexity 1 49 0 243 253 13 27 chr5 11338828 11338903 -191746629 - Charlie4a DNA MER1_type 0 508 435 851 144 0 0 chr5 11338918 11339036 -191746496 + FLAM_C SINE Alu 1 118 -25 227 247 12 0 chr5 11339074 11339155 -191746377 - Charlie4a DNA MER1_type -71 437 356 2162 122 3 3 chr5 11339155 11339459 -191746073 - AluSx SINE Alu -8 304 1 790 176 0 15 chr5 11339581 11339712 -191745820 - AluJb SINE Alu -99 213 85 415 257 115 11 chr5 11339712 11339895 -191745637 - Charlie4a DNA MER1_type -147 361 160 756 37 9 18 chr5 11340461 11340570 -191744962 + AluY SINE Alu 200 307 -4 638 318 17 13 chr5 11341330 11341566 -191743966 - MIR SINE MIR -25 237 1 3381 120 53 18 chr5 11342827 11343336 -191742196 + MER1A DNA MER1_type 1 527 0 2034 114 0 57 chr5 11344157 11344473 -191741059 - AluSc SINE Alu -11 298 1 9334 46 17 2 chr5 11345034 11346213 -191739319 - L1PA13 LINE L1 -3396 3401 2197 181 267 0 0 chr5 11347962 11348022 -191737510 - L2 LINE L2 -151 3162 3103 1029 203 30 9 chr5 11348055 11348287 -191737245 + MLT2C1 LTR ERVL 1 237 -160 1355 206 81 79 chr5 11348955 11349449 -191736083 + Charlie1b DNA MER1_type 7 501 -22 218 267 15 30 chr5 11349764 11349895 -191735637 + (CACAA)n Simple_repeat Simple_repeat 5 133 0 4442 101 44 35 chr5 11350695 11351377 -191734155 + LTR12 LTR ERV1 1 688 0 239 354 31 8 chr5 11351394 11351524 -191734008 - MIR SINE MIR -64 198 66 216 0 0 0 chr5 11351945 11351969 -191733563 + (A)n Simple_repeat Simple_repeat 1 24 0 450 231 388 0 chr5 11353145 11353483 -191732049 + LTR50 LTR ERVL 2 470 -325 225 299 0 15 chr5 11354464 11354531 -191731001 + MER5A DNA MER1_type 7 72 -117 373 82 0 0 chr5 11354535 11354584 -191730948 + HY4 scRNA scRNA 1 49 -44 260 271 0 0 chr5 11354584 11354643 -191730889 + MER5A DNA MER1_type 64 122 -67 2161 84 0 0 chr5 11354695 11354958 -191730574 - AluSc SINE Alu -7 302 40 664 268 188 29 chr5 11357384 11357794 -191727738 - L1ME2 LINE L1 -67 6097 5623 1382 315 40 30 chr5 11357795 11358196 -191727336 - MLT1G1 LTR MaLR -66 529 120 2136 191 14 3 chr5 11358196 11358553 -191726979 + MLT1A1 LTR MaLR 1 361 -4 1382 315 40 30 chr5 11358553 11358675 -191726857 - MLT1G1 LTR MaLR -475 120 1 267 257 38 19 chr5 11358895 11359000 -191726532 + MLT1F1 LTR MaLR 1 107 -460 2168 134 9 170 chr5 11359219 11359435 -191726097 + Charlie1 DNA MER1_type 2198 2447 -314 1527 179 10 56 chr5 11359435 11359737 -191725795 + AluJo SINE Alu 1 288 -24 228 67 0 0 chr5 11359747 11359777 -191725755 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2168 134 9 170 chr5 11359777 11359847 -191725685 + Charlie1 DNA MER1_type 2457 2537 -224 2125 127 7 10 chr5 11359847 11360154 -191725378 - AluSx SINE Alu -6 306 1 2168 134 9 170 chr5 11360154 11360396 -191725136 + Charlie1 DNA MER1_type 2537 2614 -147 2302 100 0 0 chr5 11360396 11360687 -191724845 - AluSx SINE Alu -21 291 1 2168 134 9 170 chr5 11360687 11360809 -191724723 + Charlie1 DNA MER1_type 2614 2754 -7 386 336 0 16 chr5 11361768 11361896 -191723636 + L2 LINE L2 3188 3313 0 333 68 0 0 chr5 11362169 11362213 -191723319 + (TA)n Simple_repeat Simple_repeat 2 45 0 1074 55 0 0 chr5 11363038 11363166 -191722366 + AluY SINE Alu 174 301 -10 5163 154 35 11 chr5 11363166 11364300 -191721232 - L1MB3 LINE L1 -10 6173 5015 300 300 36 70 chr5 11366051 11366381 -191719151 + L1MEc LINE L1 498 816 -5580 313 243 97 19 chr5 11366386 11366489 -191719043 + L1MEc LINE L1 1056 1166 -5230 2630 208 65 50 chr5 11366502 11367099 -191718433 - MER82 DNA MER2_type -46 607 2 1741 237 71 33 chr5 11367496 11368074 -191717458 + L1ME1 LINE L1 5562 6161 -5 215 233 0 0 chr5 11369302 11369345 -191716187 + L2 LINE L2 1545 1587 -1727 847 258 125 31 chr5 11371750 11372134 -191713398 + L1MD3 LINE L1 5527 5946 -2049 23 78 0 0 chr5 11372151 11372202 -191713330 + AT_rich Low_complexity Low_complexity 1 51 0 2521 76 0 0 chr5 11372888 11373192 -191712340 + AluY SINE Alu 1 304 -7 297 272 184 53 chr5 11373196 11373402 -191712130 + L2 LINE L2 3076 3308 -5 828 174 95 26 chr5 11373478 11373668 -191711864 + MER105 DNA DNA 1 203 -1 186 317 0 0 chr5 11374622 11374682 -191710850 + MIR SINE MIR 57 116 -146 2323 194 26 7 chr5 11375371 11375788 -191709744 - MSTB LTR MaLR 0 426 2 184 275 0 0 chr5 11375909 11375949 -191709583 - L3b LINE CR1 -13 1570 1531 216 111 0 0 chr5 11376003 11376039 -191709493 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 15203 86 26 3 chr5 11376121 11379048 -191706484 + L1PA8 LINE L1 3161 6152 -20 238 277 175 15 chr5 11379050 11379187 -191706345 - L3 LINE CR1 -193 1384 1226 2555 55 7 0 chr5 11379196 11379505 -191706027 - AluY SINE Alu 0 311 1 284 341 11 21 chr5 11380452 11380570 -191704962 - MER5B DNA MER1_type -4 174 65 1552 217 45 12 chr5 11380632 11380969 -191704563 + MER7A DNA MER2_type 1 346 0 342 0 0 0 chr5 11381734 11381772 -191703760 + (CA)n Simple_repeat Simple_repeat 2 39 0 2336 80 0 22 chr5 11381945 11382258 -191703274 - AluSp SINE Alu -7 306 1 196 352 28 0 chr5 11382543 11382614 -191702918 - MIR SINE MIR -82 126 54 233 291 0 0 chr5 11383690 11383745 -191701787 + MIR SINE MIR 95 149 -113 3278 211 114 20 chr5 11384097 11385088 -191700444 - Charlie1a DNA MER1_type -49 1406 323 1331 216 172 13 chr5 11385218 11385695 -191699837 - Charlie1a DNA MER1_type -602 853 301 664 269 55 0 chr5 11385701 11385902 -191699630 - Charlie1a DNA MER1_type -1184 271 60 232 303 92 7 chr5 11387395 11387547 -191697985 - MIR SINE MIR -78 184 20 23 0 0 0 chr5 11387566 11387589 -191697943 + AT_rich Low_complexity Low_complexity 1 23 0 1120 178 50 9 chr5 11387808 11388027 -191697505 - MER46A DNA MER2_type 0 236 9 1702 123 24 0 chr5 11388244 11388497 -191697035 - AluSp SINE Alu -54 259 1 200 86 52 17 chr5 11388527 11388585 -191696947 + (TA)n Simple_repeat Simple_repeat 1 60 0 1314 179 0 0 chr5 11388597 11388804 -191696728 + AluSx SINE Alu 1 207 -105 410 143 33 44 chr5 11388804 11388895 -191696637 - L1MA7 LINE L1 -252 6039 5950 1473 201 144 17 chr5 11388899 11389403 -191696129 - Charlie1 DNA MER1_type -884 1877 5 2954 171 54 139 chr5 11390036 11390382 -191695150 + L1MB5 LINE L1 5298 5672 -502 1686 70 33 5 chr5 11390382 11390597 -191694935 + AluSq SINE Alu 1 221 -92 2954 171 54 139 chr5 11390597 11391208 -191694324 + L1MB5 LINE L1 5672 6174 0 557 133 11 22 chr5 11391206 11391296 -191694236 - L1MD1 LINE L1 -53 6189 6101 * 1296 97 0 0 chr5 11391297 11391462 -191694070 + AluSx SINE Alu 2 166 -146 320 214 14 0 chr5 11391462 11391532 -191694000 - L1MD2 LINE L1 -144 6215 6145 543 191 56 0 chr5 11391534 11391660 -191693872 + MER58 DNA MER1_type 86 218 -2202 1163 149 58 10 chr5 11391660 11391868 -191693664 - AluJo SINE Alu -2 310 93 2128 258 29 51 chr5 11392151 11392218 -191693314 + L1MC4 LINE L1 7213 7280 -762 2605 127 8 3 chr5 11392218 11392579 -191692953 + THE1B LTR MaLR 1 363 -1 2128 258 29 51 chr5 11392579 11393071 -191692461 + L1MC4 LINE L1 7280 7733 -309 2139 110 3 0 chr5 11393071 11393353 -191692179 + AluSq SINE Alu 5 287 -26 2128 258 29 51 chr5 11393353 11393650 -191691882 + L1MC4 LINE L1 7733 8035 -7 1830 127 0 31 chr5 11394657 11394981 -191690551 + L1PA5 LINE L1 5841 6154 0 534 299 118 14 chr5 11395153 11395364 -191690168 + MIR SINE MIR 20 252 -10 1016 205 132 99 chr5 11395549 11395913 -191689619 + MLT1D LTR MaLR 5 451 -116 2131 131 3 0 chr5 11395913 11396210 -191689322 - AluSx SINE Alu -14 298 1 1016 205 132 99 chr5 11396210 11396323 -191689209 + MLT1D LTR MaLR 451 559 -8 604 116 16 41 chr5 11396668 11396789 -191688743 - AluSg1 SINE Alu -180 129 12 621 224 128 98 chr5 11397308 11397391 -191688141 - MLT1J LTR MaLR -3 508 429 1920 157 0 10 chr5 11397391 11397691 -191687841 + AluJb SINE Alu 1 297 -15 621 224 128 98 chr5 11397691 11397973 -191687559 - MLT1J LTR MaLR -82 429 132 4031 109 78 10 chr5 11398087 11398693 -191686839 + THE1C-int LTR MaLR 934 1580 0 2347 108 54 38 chr5 11398693 11398842 -191686690 + THE1C LTR MaLR 1 146 -229 1822 149 0 23 chr5 11398842 11399143 -191686389 - AluSg SINE Alu -16 294 1 2347 108 54 38 chr5 11399143 11399362 -191686170 + THE1C LTR MaLR 146 375 0 234 0 0 0 chr5 11399401 11399427 -191686105 + (TG)n Simple_repeat Simple_repeat 2 27 0 260 204 82 20 chr5 11399465 11399563 -191685969 + ERVL LTR ERVL 5474 5577 -187 255 61 0 0 chr5 11400239 11400272 -191685260 + (TAA)n Simple_repeat Simple_repeat 1 33 0 395 183 62 42 chr5 11400483 11400600 -191684932 + MIR SINE MIR 33 149 -62 2298 109 0 0 chr5 11400664 11400968 -191684564 - AluSx SINE Alu -8 304 1 2198 74 0 4 chr5 11402386 11402656 -191682876 - AluSx SINE Alu -43 269 1 1015 209 34 34 chr5 11402981 11403216 -191682316 + MIR SINE MIR 28 262 0 254 248 143 8 chr5 11403447 11403580 -191681952 - L2 LINE L2 -1159 2155 2005 236 375 0 0 chr5 11405236 11405316 -191680216 - MIR3 SINE MIR -21 187 108 368 310 10 0 chr5 11405524 11405624 -191679908 + MIR SINE MIR 162 262 0 2513 128 34 0 chr5 11405733 11406085 -191679447 + THE1B LTR MaLR 1 364 0 299 192 51 39 chr5 11406615 11406693 -191678839 + MLT2D LTR ERVL 270 348 -66 2479 123 65 10 chr5 11406823 11407222 -191678310 + MSTA LTR MaLR 1 421 -7 228 327 127 0 chr5 11408554 11408664 -191676868 + L2 LINE L2 3149 3272 0 2340 77 6 29 chr5 11410057 11410369 -191675163 - AluSx SINE Alu -7 305 1 1531 165 27 44 chr5 11410372 11410669 -191674863 + AluJo SINE Alu 12 303 -9 181 269 58 0 chr5 11410724 11410776 -191674756 + MIR3 SINE MIR 149 203 -5 762 114 8 16 chr5 11411191 11411314 -191674218 - THE1C-int LTR MaLR -1457 123 2 2469 129 13 24 chr5 11411315 11411694 -191673838 - THE1C LTR MaLR 0 375 1 1679 115 27 51 chr5 11411719 11412015 -191673517 + HSMAR2 DNA Mariner 2 290 -1012 * 2284 153 0 11 chr5 11412012 11412384 -191673148 + HSMAR2 DNA Mariner 186 553 -749 2970 140 23 47 chr5 11412384 11412665 -191672867 - L1P4 LINE L1 -549 5616 5330 1669 197 0 13 chr5 11412665 11412964 -191672568 + AluJb SINE Alu 3 297 -15 2970 140 23 47 chr5 11412964 11413589 -191671943 - L1P4 LINE L1 -835 5330 4726 773 256 55 35 chr5 11415976 11416230 -191669302 + MIR SINE MIR 2 260 -2 391 356 55 36 chr5 11416399 11416652 -191668880 - L1M4 LINE L1 -2193 3953 3696 288 0 0 0 chr5 11416656 11416688 -191668844 + (TG)n Simple_repeat Simple_repeat 2 33 0 23 33 0 0 chr5 11416713 11416743 -191668789 + AT_rich Low_complexity Low_complexity 1 30 0 28 61 0 0 chr5 11418556 11418605 -191666927 + AT_rich Low_complexity Low_complexity 1 49 0 533 256 43 89 chr5 11421984 11422242 -191663290 - L1MC4 LINE L1 -1339 6703 6458 1850 130 79 0 chr5 11422966 11423243 -191662289 - AluJo SINE Alu -13 299 1 838 241 10 39 chr5 11423285 11423492 -191662040 + MER63A DNA MER1_type 1 201 -9 256 278 120 0 chr5 11425468 11425576 -191659956 - L1ME4a LINE L1 -2 6119 5999 254 340 124 18 chr5 11427599 11428228 -191657304 + L1M4 LINE L1 4118 4813 -1333 22 0 0 0 chr5 11428228 11428250 -191657282 + AT_rich Low_complexity Low_complexity 1 22 0 352 155 36 0 chr5 11429360 11429444 -191656088 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 1037 181 5 26 chr5 11429451 11429644 -191655888 - AluSg/x SINE Alu -14 298 110 2336 135 44 95 chr5 11429674 11430080 -191655452 + LTR54 LTR ERV1 27 452 -58 1528 129 98 59 chr5 11430080 11430367 -191655165 - AluJo SINE Alu -14 298 1 2336 135 44 95 chr5 11430367 11430428 -191655104 + LTR54 LTR ERV1 452 469 -41 1721 154 3 23 chr5 11430428 11430734 -191654798 + AluSx SINE Alu 1 300 -12 2336 135 44 95 chr5 11430734 11430770 -191654762 + LTR54 LTR ERV1 469 505 -5 227 197 28 42 chr5 11431282 11431353 -191654179 + T-rich Low_complexity Low_complexity 3 72 0 12565 55 15 1 chr5 11431430 11433078 -191652454 + L1P LINE L1 3161 4831 -1315 439 266 0 43 chr5 11433273 11433461 -191652071 + A-rich Low_complexity Low_complexity 1 180 0 312 281 96 44 chr5 11433579 11433714 -191651818 - MER5A DNA MER1_type -1 188 47 871 160 48 43 chr5 11433715 11433903 -191651629 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 11434018 11434051 -191651481 + AT_rich Low_complexity Low_complexity 1 33 0 2160 78 53 0 chr5 11435150 11435431 -191650101 - AluSp SINE Alu -13 300 5 186 43 0 0 chr5 11436689 11436712 -191648820 + (GA)n Simple_repeat Simple_repeat 1 23 0 360 281 91 16 chr5 11437129 11437250 -191648282 - L3 LINE CR1 -73 1504 1375 2384 184 23 12 chr5 11437331 11437810 -191647722 + L1 LINE L1 4416 4899 -1247 739 269 64 42 chr5 11437854 11438118 -191647414 + MSTD LTR MaLR 36 305 -91 875 53 0 26 chr5 11438610 11438758 -191646774 - AluY SINE Alu 0 311 180 486 300 112 15 chr5 11438786 11439046 -191646486 - L3 LINE CR1 -306 1271 987 2284 158 42 0 chr5 11439185 11439590 -191645942 + L1 LINE L1 4672 5093 -1053 323 284 107 58 chr5 11439779 11440004 -191645528 - MLT1K LTR MaLR -342 246 11 4995 52 41 11 chr5 11440056 11440714 -191644818 - LTR17 LTR ERV1 0 780 103 2118 158 26 123 chr5 11440838 11441408 -191644124 - L1MCa LINE L1 -5467 959 445 524 273 153 0 chr5 11442713 11442929 -191642603 + MIR SINE MIR 1 249 -13 2171 177 28 8 chr5 11443462 11443858 -191641674 - MER65C LTR ERV1 -57 404 1 198 232 87 58 chr5 11443860 11443929 -191641603 + MIR SINE MIR 82 152 -110 2458 63 0 3 chr5 11444524 11444823 -191640709 - AluY SINE Alu -11 300 3 272 215 9 109 chr5 11446822 11446961 -191638571 + L1MDb LINE L1 1194 1316 -5080 249 262 39 29 chr5 11446934 11447037 -191638495 + L1M4 LINE L1 3696 3799 -2607 * 445 175 0 0 chr5 11447046 11447109 -191638423 - AluJ/FLAM SINE Alu -248 64 2 2239 244 52 60 chr5 11447110 11447343 -191638189 + L1M4 LINE L1 3804 4037 -2369 2140 115 3 16 chr5 11447343 11447648 -191637884 + AluSx SINE Alu 1 301 -11 2239 244 52 60 chr5 11447648 11448061 -191637471 + L1M4 LINE L1 4037 4444 -1962 1782 115 19 8 chr5 11448061 11448321 -191637211 - AluSq SINE Alu -50 263 1 2239 244 52 60 chr5 11448321 11448554 -191636978 + L1M4 LINE L1 4444 4677 -1729 517 283 147 5 chr5 11448744 11448935 -191636597 + MIR SINE MIR 19 236 -26 2107 98 7 20 chr5 11448995 11449291 -191636241 - AluSg SINE Alu -18 292 1 1879 120 17 17 chr5 11449988 11450280 -191635252 + AluSx SINE Alu 1 292 -20 1561 157 15 11 chr5 11450600 11450862 -191634670 + AluJb SINE Alu 39 301 -11 505 295 170 18 chr5 11450957 11451181 -191634351 - MIR SINE MIR -3 259 2 335 126 53 53 chr5 11451218 11451313 -191634219 + MLT1J2 LTR MaLR 24 118 -332 1307 157 60 4 chr5 11451325 11451560 -191633972 - AluJb SINE Alu 0 312 65 225 333 13 0 chr5 11451663 11451738 -191633794 + MLT1J2 LTR MaLR 226 301 -149 2071 143 0 13 chr5 11451823 11452131 -191633401 + AluSq SINE Alu 1 304 -9 357 272 66 135 chr5 11453242 11453591 -191631941 - L3 LINE CR1 -808 769 445 481 173 70 177 chr5 11453765 11453905 -191631627 - MIR SINE MIR -27 235 129 1719 146 52 4 chr5 11453905 11454197 -191631335 + AluJb SINE Alu 1 305 0 481 173 70 177 chr5 11454197 11454298 -191631234 - MIR SINE MIR -133 129 19 2454 90 0 3 chr5 11454661 11454972 -191630560 - AluSp SINE Alu 0 313 4 1064 132 6 0 chr5 11455111 11455270 -191630262 - AluSc SINE Alu -4 305 146 565 274 0 0 chr5 11455465 11455618 -191629914 - MIR SINE MIR -16 246 94 5517 106 49 17 chr5 11456025 11456316 -191629216 + L1PA16 LINE L1 5106 5386 -780 2012 124 7 39 chr5 11456316 11456622 -191628910 + AluSx SINE Alu 1 296 -16 5517 106 49 17 chr5 11456622 11457353 -191628179 + L1PA16 LINE L1 5386 6157 -9 1924 132 35 0 chr5 11457503 11457791 -191627741 + AluSx SINE Alu 1 298 -14 210 37 0 0 chr5 11457791 11457818 -191627714 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 266 368 65 11 chr5 11458073 11458258 -191627274 - MIR SINE MIR -34 228 34 770 229 59 80 chr5 11458535 11458823 -191626709 + LTR1B LTR ERV1 545 826 0 1541 241 73 44 chr5 11458887 11459406 -191626126 - L1ME1 LINE L1 -14 6152 5619 2054 133 0 3 chr5 11459499 11459785 -191625747 - AluSx SINE Alu -15 297 13 759 181 12 41 chr5 11459795 11459966 -191625566 + L1MB5 LINE L1 6009 6174 0 1233 138 0 0 chr5 11460057 11460231 -191625301 - AluSq SINE Alu -10 303 130 440 143 14 0 chr5 11461823 11461893 -191623639 + AluSx SINE Alu 3 73 -239 6274 130 13 15 chr5 11461894 11462865 -191622667 + LTR5 LTR ERVK 1 969 0 1616 129 0 13 chr5 11462866 11463091 -191622441 + AluSx SINE Alu 71 292 -20 6130 137 49 56 chr5 11463617 11464637 -191620895 - Tigger3b DNA MER2_type -1798 1230 205 216 0 0 0 chr5 11464637 11464661 -191620871 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2062 108 7 0 chr5 11464663 11464941 -191620591 - AluSx SINE Alu -32 280 1 6130 137 49 56 chr5 11464941 11465155 -191620377 - Tigger3b DNA MER2_type -2824 204 1 1962 147 3 10 chr5 11465161 11465467 -191620065 - AluSx SINE Alu 0 312 9 684 245 88 80 chr5 11465474 11465685 -191619847 - L1ME4a LINE L1 -243 6673 6456 2499 54 3 0 chr5 11465685 11465981 -191619551 - AluY SINE Alu -14 297 1 684 245 88 80 chr5 11465981 11466145 -191619387 - L1ME4a LINE L1 -460 6456 6295 1087 127 0 24 chr5 11466219 11466385 -191619147 - AluSg/x SINE Alu -12 300 139 825 38 114 0 chr5 11466508 11466613 -191618919 + AluY SINE Alu 1 117 -194 286 130 19 56 chr5 11467917 11467971 -191617561 + MER69 DNA AcHobo 15 66 -2460 591 213 28 14 chr5 11468100 11468241 -191617291 + MER69 DNA AcHobo 2380 2522 -4 267 31 0 0 chr5 11468374 11468406 -191617126 + (TG)n Simple_repeat Simple_repeat 2 33 0 1446 179 6 80 chr5 11469779 11469911 -191615621 + AluJo SINE Alu 2 142 -170 2183 78 7 4 chr5 11469911 11470192 -191615340 + AluSc SINE Alu 1 282 -27 1446 179 6 80 chr5 11470192 11470371 -191615161 + AluJo SINE Alu 142 290 -22 1903 69 0 4 chr5 11470373 11470604 -191614928 + AluY SINE Alu 1 230 -81 1710 203 29 29 chr5 11470705 11471085 -191614447 - L1MDa LINE L1 -6158 382 3 777 282 97 24 chr5 11471953 11472365 -191613167 + LTR33 LTR ERVL 42 483 -38 2032 146 14 0 chr5 11472489 11472784 -191612748 + AluJo SINE Alu 1 299 -13 2064 83 6 51 chr5 11472812 11473115 -191612417 + AluSx SINE Alu 1 291 -21 278 26 26 0 chr5 11473115 11473154 -191612378 + (CA)n Simple_repeat Simple_repeat 2 41 0 2780 78 3 0 chr5 11474233 11474594 -191610938 + SVA Other Other 15 376 -1010 366 234 263 7 chr5 11474834 11474971 -191610561 - MIR SINE MIR -84 178 7 242 94 0 0 chr5 11474971 11475003 -191610529 + MLT1H LTR MaLR 12 43 -506 2498 235 50 54 chr5 11475393 11476424 -191609108 - L1ME4a LINE L1 -739 6220 5178 375 237 32 12 chr5 11476435 11476576 -191608956 - L1MCc LINE L1 -4887 1536 1410 273 0 0 96 chr5 11476926 11476978 -191608554 + (TTTCG)n Simple_repeat Simple_repeat 2 48 0 220 200 0 36 chr5 11477135 11477190 -191608342 + CT-rich Low_complexity Low_complexity 3 55 0 284 203 31 0 chr5 11477452 11477516 -191608016 - L1MCc LINE L1 -5938 993 928 4850 70 3 16 chr5 11477517 11478136 -191607396 - SVA Other Other -1 1385 775 353 86 0 71 chr5 11478236 11478306 -191607226 + AluY SINE Alu 238 302 0 288 0 0 0 chr5 11478405 11478437 -191607095 + (GA)n Simple_repeat Simple_repeat 1 32 0 2351 82 7 0 chr5 11479469 11479760 -191605772 + AluSp SINE Alu 1 293 -20 578 179 0 86 chr5 11479774 11479891 -191605641 + L1ME LINE L1 5477 5583 -583 1605 134 53 53 chr5 11479891 11480233 -191605299 + MER4A LTR ERV1 1 342 -322 2238 105 0 3 chr5 11480235 11480530 -191605002 + AluSg SINE Alu 1 294 -16 716 155 181 73 chr5 11480543 11480820 -191604712 + MER4C LTR ERV1 157 465 0 470 188 0 0 chr5 11480820 11480900 -191604632 + L1ME LINE L1 5580 5659 -507 531 298 66 40 chr5 11480971 11481273 -191604259 - L2 LINE L2 -444 2870 2561 2548 55 0 0 chr5 11481321 11481614 -191603918 - AluY SINE Alu -18 293 1 496 188 0 70 chr5 11481841 11481969 -191603563 - L1MC4 LINE L1 -11 8031 7913 219 203 0 0 chr5 11481969 11482033 -191603499 + CT-rich Low_complexity Low_complexity 1 64 0 14248 109 27 44 chr5 11482097 11482906 -191602626 - Tigger1 DNA MER2_type 0 2418 1597 2394 72 0 7 chr5 11482906 11483196 -191602336 - AluY SINE Alu -12 299 12 14248 109 27 44 chr5 11483196 11484655 -191600877 - Tigger1 DNA MER2_type -821 1597 188 399 296 164 0 chr5 11484988 11485177 -191600355 - MIR SINE MIR -15 247 28 2187 95 28 0 chr5 11486199 11486484 -191599048 + AluSc SINE Alu 1 293 -16 1458 160 0 89 chr5 11486582 11486920 -191598612 - AluJb SINE Alu -4 308 1 3599 195 21 75 chr5 11486971 11487886 -191597646 - L1ME1 LINE L1 -19 6147 5299 2261 89 3 0 chr5 11487886 11488209 -191597323 - AluY SINE Alu 0 324 1 3599 195 21 75 chr5 11488209 11488318 -191597214 - L1ME1 LINE L1 -867 5299 5186 2011 148 3 3 chr5 11488397 11488695 -191596837 - AluSx SINE Alu -14 298 1 2257 123 0 3 chr5 11488804 11489112 -191596420 + AluSg SINE Alu 1 307 -3 609 252 66 26 chr5 11489169 11489540 -191595992 + L1ME LINE L1 5254 5644 -477 192 241 93 0 chr5 11490846 11490900 -191594632 + MER5A DNA MER1_type 63 121 -68 1780 177 0 7 chr5 11491191 11491490 -191594042 - AluJo SINE Alu -15 297 1 209 33 33 0 chr5 11491501 11491531 -191594001 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 2330 34 9 96 chr5 11491541 11491863 -191593669 - AluY SINE Alu -17 294 1 1588 168 111 18 chr5 11492024 11492357 -191593175 + MLT1A1 LTR MaLR 1 364 -1 362 222 121 0 chr5 11492408 11492507 -191593025 - L2 LINE L2 -11 3302 3192 2242 111 0 7 chr5 11492578 11492876 -191592656 - AluSx SINE Alu -16 296 1 552 234 43 33 chr5 11492879 11493063 -191592469 - MIR SINE MIR -64 198 13 288 277 92 25 chr5 11493726 11493845 -191591687 + MIR SINE MIR 107 233 -29 342 218 97 1 chr5 11493949 11494040 -191591492 - MIR3 SINE MIR -51 157 59 182 167 0 0 chr5 11496132 11496162 -191589370 + L2 LINE L2 3261 3290 -23 2294 94 3 7 chr5 11496270 11496568 -191588964 - AluSx SINE Alu -15 297 1 431 219 73 0 chr5 11496898 11496994 -191588538 - MLT1I LTR MaLR 0 409 307 249 324 0 0 chr5 11497073 11497147 -191588385 - MLT1I LTR MaLR -254 155 82 2308 70 35 0 chr5 11497166 11497452 -191588080 + AluY SINE Alu 1 296 -15 724 50 350 0 chr5 11497453 11497573 -191587959 + AluSc SINE Alu 132 293 -16 1627 142 11 21 chr5 11498021 11498092 -191587440 - Tigger5 DNA MER2_type 0 2323 2253 2052 138 3 13 chr5 11498092 11498397 -191587135 - AluJb SINE Alu -10 302 1 1627 142 11 21 chr5 11498397 11498606 -191586926 - Tigger5 DNA MER2_type -70 2253 2046 376 304 14 10 chr5 11498896 11499067 -191586465 + A-rich Low_complexity Low_complexity 3 299 0 244 289 12 12 chr5 11499097 11499180 -191586352 + GA-rich Low_complexity Low_complexity 2 84 0 279 289 0 0 chr5 11499512 11499602 -191585930 + L1MC4 LINE L1 6614 6703 -1339 269 216 0 69 chr5 11499521 11499623 -191585909 - L1MC4 LINE L1 -1340 6702 6608 * 231 250 24 12 chr5 11500399 11500483 -191585049 + L1ME3 LINE L1 4757 4841 -1305 462 279 43 5 chr5 11500537 11500879 -191584653 + L1ME3 LINE L1 5071 5426 -738 258 32 0 0 chr5 11500928 11500959 -191584573 + (CAA)n Simple_repeat Simple_repeat 2 32 0 551 280 73 35 chr5 11500961 11501222 -191584310 + L1ME3 LINE L1 5560 5830 -332 2297 92 13 0 chr5 11501223 11501528 -191584004 + AluSg SINE Alu 1 309 -1 2127 85 41 30 chr5 11501595 11501890 -191583642 + AluY SINE Alu 1 298 -13 240 368 53 0 chr5 11501948 11502043 -191583489 - L2 LINE L2 -39 3233 3134 185 413 11 11 chr5 11502134 11502226 -191583306 - L2 LINE L2 -195 3077 2986 1504 77 39 14 chr5 11502290 11502498 -191583034 - AluSg/x SINE Alu -20 292 80 1812 151 0 37 chr5 11502955 11503253 -191582279 - AluJo SINE Alu -13 299 13 754 137 8 23 chr5 11503284 11503415 -191582117 - FLAM_A SINE Alu -1 132 4 1882 101 3 67 chr5 11503451 11503767 -191581765 + AluSp SINE Alu 1 296 -17 2293 78 0 3 chr5 11504538 11504831 -191580701 - AluY SINE Alu -19 292 1 891 237 9 26 chr5 11505145 11505373 -191580159 + MIR SINE MIR 8 231 -31 312 282 22 83 chr5 11505410 11505584 -191579948 - MER5A DNA MER1_type -12 166 1 942 269 119 66 chr5 11506513 11506944 -191578588 - MLT1L LTR MaLR -13 602 195 2312 110 0 0 chr5 11506944 11507243 -191578289 + AluSx SINE Alu 1 299 -13 942 269 119 66 chr5 11507243 11507334 -191578198 - MLT1L LTR MaLR -420 195 110 2078 115 21 0 chr5 11507334 11507621 -191577911 + AluSx SINE Alu 5 297 -15 942 269 119 66 chr5 11507621 11507669 -191577863 - MLT1L LTR MaLR -505 110 1 2236 54 14 4 chr5 11507774 11508052 -191577480 - AluY SINE Alu -30 281 1 259 341 11 21 chr5 11508994 11509112 -191576420 - MER5B DNA MER1_type -4 174 65 1461 217 45 12 chr5 11509174 11509511 -191576021 + MER7A DNA MER2_type 1 346 0 451 182 96 13 chr5 11510096 11510259 -191575273 - L1 LINE L1 -2326 3820 3650 6259 153 20 11 chr5 11510259 11511262 -191574270 - ERVL LTR ERVL -3179 2585 1574 677 245 23 54 chr5 11511267 11511533 -191573999 - MER4C LTR ERV1 -2 695 273 2238 102 0 0 chr5 11511554 11511837 -191573695 + AluSq SINE Alu 1 283 -30 515 328 123 26 chr5 11512541 11513086 -191572446 + L2 LINE L2 1404 2001 -1313 1945 139 10 26 chr5 11513095 11513405 -191572127 + AluJb SINE Alu 1 305 -7 1647 152 16 70 chr5 11513548 11513864 -191571668 - AluJb SINE Alu -7 305 7 432 328 38 21 chr5 11513867 11514105 -191571427 + L2 LINE L2 2306 2547 -767 1110 174 104 14 chr5 11514111 11514323 -191571209 - MER8 DNA MER2_type -1 238 8 2005 95 12 67 chr5 11514353 11514680 -191570852 - AluSx SINE Alu 0 312 4 853 111 14 14 chr5 11514692 11514836 -191570696 - AluYb8 SINE Alu 0 318 175 975 216 183 30 chr5 11515315 11515643 -191569889 + LTR33 LTR ERVL 1 378 -143 1839 153 24 20 chr5 11515715 11516010 -191569522 - AluJb SINE Alu -16 296 1 192 315 22 34 chr5 11516274 11516363 -191569169 - MIR SINE MIR -105 103 16 525 227 108 35 chr5 11516635 11516838 -191568694 + MIR SINE MIR 19 236 -26 2098 131 0 19 chr5 11516848 11517162 -191568370 + AluSx SINE Alu 1 308 -4 237 129 32 16 chr5 11518503 11518565 -191566967 + (CAT)n Simple_repeat Simple_repeat 1 63 0 236 269 73 91 chr5 11518568 11518691 -191566841 - MIR SINE MIR -12 250 131 2304 99 3 0 chr5 11518691 11518983 -191566549 + AluSp SINE Alu 2 294 -19 236 269 73 91 chr5 11518983 11519078 -191566454 - MIR SINE MIR -131 131 36 941 99 19 6 chr5 11519116 11519278 -191566254 + (TTTC)n Simple_repeat Simple_repeat 3 166 0 546 167 10 10 chr5 11519562 11519658 -191565874 + Tigger7 DNA MER2_type 2392 2487 0 545 252 132 6 chr5 11519658 11519815 -191565717 + MLT1J2 LTR MaLR 198 374 -76 2100 121 0 0 chr5 11519816 11520098 -191565434 - AluSx SINE Alu -17 295 14 2464 91 0 7 chr5 11521540 11521849 -191563683 - AluSg SINE Alu -3 307 1 2126 121 3 13 chr5 11522313 11522618 -191562914 - AluSq SINE Alu -5 308 7 519 106 0 0 chr5 11522748 11522814 -191562718 + U6 snRNA snRNA 41 106 -1 21 0 0 0 chr5 11522814 11522835 -191562697 + AT_rich Low_complexity Low_complexity 1 21 0 2065 123 3 0 chr5 11522896 11523217 -191562315 + AluSq SINE Alu 1 322 0 234 262 0 0 chr5 11524222 11524306 -191561226 + A-rich Low_complexity Low_complexity 1 84 0 7410 189 71 28 chr5 11524839 11526319 -191559213 - ERVL LTR ERVL -4168 1596 54 346 232 14 106 chr5 11526478 11526620 -191558912 - L2 LINE L2 -1 3312 3184 918 254 29 55 chr5 11526621 11526896 -191558636 - LTR16C LTR ERVL 0 491 224 294 106 0 0 chr5 11528303 11528350 -191557182 + (TG)n Simple_repeat Simple_repeat 1 47 0 23 86 0 0 chr5 11528997 11529055 -191556477 + AT_rich Low_complexity Low_complexity 1 58 0 345 82 0 0 chr5 11529364 11529413 -191556119 + (TG)n Simple_repeat Simple_repeat 1 49 0 603 272 55 32 chr5 11529913 11530130 -191555402 + MIR SINE MIR 20 241 -21 313 282 104 49 chr5 11530636 11530671 -191554861 - MER5B DNA MER1_type -3 175 143 2290 92 7 0 chr5 11530671 11530966 -191554566 + AluSc SINE Alu 1 297 -12 313 282 104 49 chr5 11530966 11531093 -191554439 - MER5B DNA MER1_type -35 143 4 238 259 15 118 chr5 11531094 11531229 -191554303 - MIR3 SINE MIR -46 162 42 347 273 23 30 chr5 11531464 11531596 -191553936 + MIR SINE MIR 52 182 -80 217 317 52 71 chr5 11532195 11532504 -191553028 + L2 LINE L2 2599 2901 -413 2420 53 0 26 chr5 11532528 11532832 -191552700 - AluY SINE Alu -15 296 1 2041 137 0 10 chr5 11533205 11533505 -191552027 - AluSx SINE Alu -13 299 3 2303 48 19 63 chr5 11534694 11535010 -191550522 + AluY SINE Alu 1 302 -9 2276 112 0 10 chr5 11535490 11535793 -191549739 - AluSx SINE Alu -12 300 1 2168 130 0 16 chr5 11535806 11536121 -191549411 - AluSx SINE Alu -2 310 1 328 208 111 0 chr5 11536601 11536673 -191548859 + MER58 DNA MER1_type 11 90 -125 2599 65 0 7 chr5 11536697 11537006 -191548526 + AluSp SINE Alu 1 307 -6 569 163 61 7 chr5 11537059 11537206 -191548326 + L1M4 LINE L1 5119 5273 -873 454 290 58 8 chr5 11537383 11537557 -191547975 + MIR SINE MIR 37 217 -45 475 123 123 12 chr5 11537822 11537903 -191547629 + 5S rRNA rRNA 1 90 -31 2189 99 20 3 chr5 11538089 11538381 -191547151 + AluSx SINE Alu 1 297 -15 406 274 60 0 chr5 11538401 11538518 -191547014 - L2 LINE L2 0 3313 3190 38 0 0 0 chr5 11538625 11538663 -191546869 + AT_rich Low_complexity Low_complexity 1 38 0 183 268 0 0 chr5 11539006 11539047 -191546485 + MIR SINE MIR 108 148 -60 1523 253 72 5 chr5 11539070 11539461 -191546071 - MLT1J2 LTR MaLR -18 432 16 198 311 14 0 chr5 11539472 11539546 -191545986 + MIR SINE MIR 152 226 -36 256 286 31 76 chr5 11539946 11540170 -191545362 + L2 LINE L2 2662 2875 -439 215 240 231 39 chr5 11540166 11540270 -191545262 - L2 LINE L2 0 3313 3190 * 355 317 44 28 chr5 11540408 11540588 -191544944 + L2 LINE L2 3120 3302 -11 225 65 0 0 chr5 11540588 11540619 -191544913 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 183 277 15 15 chr5 11542204 11542269 -191543263 - MER5A DNA MER1_type -7 182 118 2235 106 0 20 chr5 11542321 11542623 -191542909 - AluSg SINE Alu -14 296 1 850 204 74 6 chr5 11542928 11543090 -191542442 - MER21B LTR ERV1 -364 499 327 512 259 15 7 chr5 11543133 11543268 -191542264 - MER5B DNA MER1_type 0 178 43 835 250 37 14 chr5 11543270 11543486 -191542046 + AluJo SINE Alu 1 221 -91 268 98 0 59 chr5 11543486 11543537 -191541995 + FLAM_A SINE Alu 86 133 0 186 43 0 0 chr5 11543560 11543583 -191541949 + (CA)n Simple_repeat Simple_repeat 2 24 0 2018 149 0 0 chr5 11543603 11543892 -191541640 - AluSx SINE Alu -23 289 1 182 191 0 143 chr5 11543900 11543963 -191541569 + MER5B DNA MER1_type 124 177 -1 200 269 0 0 chr5 11544068 11544120 -191541412 - L2 LINE L2 0 3313 3262 1205 156 39 15 chr5 11544678 11544883 -191540649 - AluJo SINE Alu -102 210 1 2028 122 7 0 chr5 11545576 11545878 -191539654 - AluSx SINE Alu 0 308 5 222 37 0 0 chr5 11547117 11547144 -191538388 + (T)n Simple_repeat Simple_repeat 1 27 0 1501 123 0 14 chr5 11547239 11547458 -191538074 - AluSq SINE Alu -97 216 1 389 244 154 32 chr5 11547691 11547847 -191537685 - MIR SINE MIR -38 224 50 593 179 222 12 chr5 11547979 11548141 -191537391 - MIR SINE MIR 0 262 67 227 185 0 19 chr5 11548730 11548768 -191536764 + CT-rich Low_complexity Low_complexity 2 40 -14 2336 80 10 22 chr5 11548768 11549081 -191536451 - AluSp SINE Alu -4 309 1 227 185 0 19 chr5 11549081 11549096 -191536436 + CT-rich Low_complexity Low_complexity 40 54 0 1595 173 11 4 chr5 11549097 11549369 -191536163 - AluJo SINE Alu -38 274 1 1868 137 0 18 chr5 11549399 11549676 -191535856 + AluJo SINE Alu 11 282 -30 387 0 0 0 chr5 11549679 11549722 -191535810 + (CAA)n Simple_repeat Simple_repeat 2 44 0 273 179 30 45 chr5 11550148 11550215 -191535317 + L3 LINE CR1 1493 1558 -19 2334 71 0 3 chr5 11550791 11551099 -191534433 + AluY SINE Alu 1 307 0 1703 152 27 17 chr5 11551300 11551596 -191533936 + AluJo SINE Alu 2 300 -12 458 243 104 107 chr5 11551741 11552021 -191533511 - L1MC4 LINE L1 -17 8025 7648 1322 146 5 24 chr5 11552021 11552234 -191533298 + AluJb SINE Alu 85 293 -19 2255 107 17 0 chr5 11552267 11552566 -191532966 + AluJb SINE Alu 1 304 -8 1076 93 0 0 chr5 11552850 11552990 -191532542 - AluSp/q SINE Alu -2 311 172 2067 132 3 0 chr5 11553948 11554236 -191531296 - AluSx SINE Alu -23 289 1 21 36 0 0 chr5 11555670 11555698 -191529834 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 11556216 11556248 -191529284 + AT_rich Low_complexity Low_complexity 1 32 0 1590 162 40 7 chr5 11557862 11558134 -191527398 + AluJb SINE Alu 9 289 -23 1462 177 85 0 chr5 11558144 11558415 -191527117 + AluJo SINE Alu 1 294 -18 1951 102 60 11 chr5 11558421 11558704 -191526828 + AluSx SINE Alu 1 297 -15 27 51 0 17 chr5 11558707 11558726 -191526806 + AT_rich Low_complexity Low_complexity 1 19 -39 1736 149 73 3 chr5 11558726 11559015 -191526517 + AluSx SINE Alu 1 309 -3 27 51 0 17 chr5 11559015 11559054 -191526478 + AT_rich Low_complexity Low_complexity 19 58 0 203 302 47 0 chr5 11560824 11560930 -191524602 + (CATA)n Simple_repeat Simple_repeat 4 114 0 345 296 96 7 chr5 11560961 11561096 -191524436 - MIR SINE MIR -51 211 65 221 328 90 25 chr5 11561813 11561935 -191523597 - MIR SINE MIR -110 152 23 1040 150 0 72 chr5 11563512 11563705 -191521827 - AluJb SINE Alu -3 309 131 31 44 0 0 chr5 11563764 11563809 -191521723 + AT_rich Low_complexity Low_complexity 1 45 0 303 180 0 0 chr5 11563848 11563898 -191521634 - Alu SINE Alu -253 50 1 186 138 35 0 chr5 11565169 11565198 -191520334 + L2 LINE L2 3184 3213 -100 2423 102 30 24 chr5 11566079 11566452 -191519080 + THE1C LTR MaLR 1 375 0 2198 103 40 0 chr5 11568474 11568774 -191516758 + AluSx SINE Alu 1 312 0 242 287 101 23 chr5 11569307 11569436 -191516096 - L1ME LINE L1 -413 5740 5602 330 278 124 43 chr5 11569463 11569672 -191515860 + L1MC/D LINE L1 5316 5541 -2267 514 301 115 27 chr5 11570009 11570524 -191515008 - L1ME LINE L1 -1881 4248 3689 775 146 33 33 chr5 11570657 11570808 -191514724 + MLT1C LTR MaLR 1 151 -316 909 294 178 12 chr5 11570911 11571483 -191514049 + HAL1 LINE L1 114 780 -1727 2848 193 72 23 chr5 11571726 11572411 -191513121 + L1MB7 LINE L1 5459 6176 -8 549 264 80 41 chr5 11572415 11572979 -191512553 + HAL1 LINE L1 1091 1708 -799 450 295 8 76 chr5 11573311 11573548 -191511984 + MIR SINE MIR 27 247 -15 362 248 218 34 chr5 11573576 11573810 -191511722 + HAL1 LINE L1 2035 2311 -196 236 305 81 29 chr5 11574342 11574516 -191511016 - L1ME LINE L1 -4938 1181 999 443 366 41 53 chr5 11575909 11576321 -191509211 - L2 LINE L2 0 3272 2866 551 217 95 13 chr5 11576639 11576794 -191508738 - L1MD3 LINE L1 0 8040 7881 361 303 192 4 chr5 11576787 11577021 -191508511 - L1MC4 LINE L1 -191 7851 7574 * 414 207 36 45 chr5 11577054 11577099 -191508433 + MER20 DNA MER1_type 31 75 -144 2885 183 74 13 chr5 11577099 11577628 -191507904 - MER68 LTR ERV1 -1 561 1 414 207 36 45 chr5 11577628 11577693 -191507839 + MER20 DNA MER1_type 75 140 -79 1774 179 0 16 chr5 11578263 11578576 -191506956 + AluJo SINE Alu 3 310 -2 181 109 43 0 chr5 11578984 11579030 -191506502 + T-rich Low_complexity Low_complexity 3 50 0 835 254 96 35 chr5 11581500 11581976 -191503556 + MER110A LTR ERV1 1 486 0 1932 196 78 43 chr5 11582170 11582654 -191502878 + MLT1D LTR MaLR 2 502 -3 419 272 0 26 chr5 11582693 11582807 -191502725 + MIR SINE MIR 152 262 0 1939 166 103 70 chr5 11583336 11583782 -191501750 - MLT2C2 LTR ERVL 0 464 4 1752 185 0 3 chr5 11583915 11584223 -191501309 - AluJo SINE Alu -5 307 1 309 289 85 69 chr5 11586592 11586852 -191498680 - ERVL LTR ERVL -5148 616 353 703 164 15 52 chr5 11587156 11587316 -191498216 + L1MA7 LINE L1 5859 6016 -165 1435 126 18 22 chr5 11587316 11587536 -191497996 + L1PB4 LINE L1 5928 6149 -7 1308 178 36 14 chr5 11587536 11587807 -191497725 + L1MA7 LINE L1 6008 6288 -3 2357 97 3 0 chr5 11588671 11588969 -191496563 - AluSp SINE Alu -14 299 1 1003 169 0 0 chr5 11589019 11589167 -191496365 - AluJb SINE Alu -33 279 132 288 291 39 39 chr5 11589369 11589496 -191496036 + L2 LINE L2 3186 3312 -1 598 224 161 98 chr5 11589750 11590085 -191495447 + LTR18A LTR ERVL 1 356 -1 238 318 111 35 chr5 11590129 11590390 -191495142 + MLT1K LTR MaLR 99 379 -209 22 35 0 0 chr5 11590852 11590881 -191494651 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr5 11590924 11590947 -191494585 + (T)n Simple_repeat Simple_repeat 1 23 0 1093 211 126 38 chr5 11591112 11591182 -191494350 + MSTC LTR MaLR 10 72 -356 1928 149 3 31 chr5 11591182 11591504 -191494028 + AluSq SINE Alu 1 313 0 1093 211 126 38 chr5 11591504 11591750 -191493782 + MSTC LTR MaLR 72 354 -74 1422 222 19 134 chr5 11592090 11592639 -191492893 - L1ME1 LINE L1 -3 6163 5697 2084 142 3 0 chr5 11592639 11592935 -191492597 - AluSx SINE Alu -15 297 1 1422 222 19 134 chr5 11592935 11593028 -191492504 - L1ME1 LINE L1 -469 5697 5595 7158 75 8 4 chr5 11593028 11594943 -191490589 + L1PA8 LINE L1 4310 6163 -9 622 200 100 6 chr5 11594985 11595145 -191490387 + L1ME LINE L1 5406 5580 -586 277 350 77 0 chr5 11595159 11595342 -191490190 + L2 LINE L2 2550 2746 -568 2338 77 3 10 chr5 11595774 11596073 -191489459 - AluSg SINE Alu -13 297 1 696 226 83 0 chr5 11596771 11596939 -191488593 + MER58B DNA MER1_type 160 341 0 734 251 127 41 chr5 11596944 11597211 -191488321 - L2 LINE L2 -616 2698 2409 796 275 116 37 chr5 11597231 11597781 -191487751 + L2 LINE L2 2702 3309 -4 332 331 126 24 chr5 11597999 11598286 -191487246 + L2 LINE L2 2757 3069 -244 25 0 0 0 chr5 11599203 11599228 -191486304 + GC_rich Low_complexity Low_complexity 1 25 0 312 127 0 0 chr5 11599569 11599624 -191485908 + (CCCCG)n Simple_repeat Simple_repeat 5 59 0 497 245 126 0 chr5 11601607 11601758 -191483774 - MER58C DNA MER1_type 0 215 46 1379 140 26 0 chr5 11603990 11604218 -191481314 - MER50 LTR ERV1 -500 234 1 206 231 96 0 chr5 11604219 11604271 -191481261 + MIR3 SINE MIR 150 206 -2 462 18 0 0 chr5 11606297 11606352 -191479180 + (TG)n Simple_repeat Simple_repeat 2 56 0 1861 124 0 89 chr5 11607702 11608017 -191477515 + AluSx SINE Alu 26 312 0 2510 127 6 3 chr5 11608508 11608871 -191476661 + THE1B LTR MaLR 1 364 0 879 189 39 149 chr5 11609694 11610472 -191475060 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr5 11611885 11611915 -191473617 + (CA)n Simple_repeat Simple_repeat 2 31 0 887 172 60 142 chr5 11613434 11613765 -191471767 + MLT1A1 LTR MaLR 20 323 -42 198 286 0 16 chr5 11614088 11614151 -191471381 + L2 LINE L2 2979 3040 -232 798 238 14 43 chr5 11614315 11614525 -191471007 + MER3 DNA MER1_type 6 209 0 390 321 42 31 chr5 11614927 11615120 -191470412 - L2 LINE L2 -497 2817 2623 2094 192 116 63 chr5 11617016 11617604 -191467928 + MLT1E3 LTR MaLR 1 619 -5 315 232 0 43 chr5 11618042 11618111 -191467421 - MER103 DNA DNA -78 88 23 183 129 0 0 chr5 11618165 11618196 -191467336 - MER5C DNA MER1_type -289 35 5 262 282 64 18 chr5 11618662 11618772 -191466760 + L1M4 LINE L1 4741 4855 -1291 293 239 95 23 chr5 11619056 11619308 -191466224 + L1M1 LINE L1 5192 5479 -701 471 237 8 8 chr5 11619714 11619832 -191465700 + LTR37B LTR ERV1 351 468 0 2394 76 0 3 chr5 11619939 11620243 -191465289 + AluY SINE Alu 1 303 -8 863 237 28 14 chr5 11620309 11620524 -191465008 + MER20 DNA MER1_type 1 218 -1 624 222 6 56 chr5 11622046 11622208 -191463324 - MER20 DNA MER1_type -6 213 60 981 253 177 59 chr5 11622626 11622892 -191462640 + MLT1E LTR MaLR 25 258 -335 2083 128 35 64 chr5 11622892 11623267 -191462265 + THE1B LTR MaLR 1 364 0 981 253 177 59 chr5 11623267 11623509 -191462023 + MLT1E LTR MaLR 258 593 0 1175 262 26 12 chr5 11623659 11624002 -191461530 + MER90 LTR ERV1 29 376 -199 2053 163 46 37 chr5 11624009 11624563 -191460969 - MLT2A2 LTR ERVL 0 554 1 458 266 35 74 chr5 11624564 11624767 -191460765 + MER90 LTR ERV1 420 614 0 440 292 9 0 chr5 11725823 11725936 -191359596 + MER81 DNA DNA 1 114 0 1024 277 140 69 chr5 11726620 11727481 -191358051 + HAL1 LINE L1 839 1596 -911 447 203 109 31 chr5 11728022 11728150 -191357382 + L2 LINE L2 3172 3309 -4 554 284 98 82 chr5 11728178 11728656 -191356876 + HAL1 LINE L1 2007 2492 -15 1569 193 3 23 chr5 11728766 11729071 -191356461 - AluJo SINE Alu -13 299 1 1096 307 98 46 chr5 11730421 11730606 -191354926 + L1MEc LINE L1 2115 2289 -3926 2076 119 7 0 chr5 11730606 11730900 -191354632 + AluSx SINE Alu 1 296 -16 1096 307 98 46 chr5 11730900 11731576 -191353956 + L1MEc LINE L1 2289 2977 -3238 302 263 12 25 chr5 11731989 11732069 -191353463 + L1MC4 LINE L1 6625 6703 -1339 * 316 194 0 56 chr5 11732052 11732124 -191353408 - L1MCa LINE L1 -4362 2064 1997 3076 165 29 8 chr5 11732143 11732731 -191352801 + L1MC1 LINE L1 5734 6333 0 1401 161 56 21 chr5 11733235 11733521 -191352011 - AluJb SINE Alu -16 296 1 541 250 12 54 chr5 11734044 11734100 -191351432 - MER45A DNA AcHobo -1420 161 104 2404 59 0 13 chr5 11734100 11734405 -191351127 + AluY SINE Alu 1 301 -10 541 250 12 54 chr5 11734405 11734516 -191351016 - MER45A DNA AcHobo -1477 104 1 206 288 119 8 chr5 11738203 11738321 -191347211 - L2 LINE L2 -2523 791 661 281 289 0 0 chr5 11738676 11738752 -191346780 - MIR SINE MIR -110 152 77 195 360 13 0 chr5 11738804 11738879 -191346653 - L2 LINE L2 -13 3300 3225 4012 161 18 60 chr5 11738889 11739708 -191345824 + LTR1 LTR ERV1 1 785 0 261 0 0 0 chr5 11740736 11740765 -191344767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2561 174 47 19 chr5 11741031 11741559 -191343973 + MER67A LTR ERV1 1 543 0 630 183 215 5 chr5 11742447 11742607 -191342925 + LTR28 LTR ERV1 1 139 -286 312 197 14 0 chr5 11742618 11742689 -191342843 + LTR1 LTR ERV1 119 190 -595 * 3140 179 129 16 chr5 11742658 11743295 -191342237 + LTR28 LTR ERV1 308 1016 -4 206 178 22 0 chr5 11743330 11743375 -191342157 - MIR SINE MIR -70 138 93 293 204 0 107 chr5 11744292 11744395 -191341137 + HsTC2 DNA Tc2 5 96 -1802 1253 179 31 0 chr5 11744752 11745009 -191340523 + L1MB3 LINE L1 5919 6183 0 1800 101 12 0 chr5 11745012 11745270 -191340262 + AluSc SINE Alu 36 296 -13 1515 180 11 7 chr5 11745322 11745606 -191339926 + AluJb SINE Alu 1 285 -27 2845 121 27 16 chr5 11746892 11747340 -191338192 + MER4C LTR ERV1 5 457 -8 261 139 0 0 chr5 11747909 11747952 -191337580 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 683 273 6 27 chr5 11748215 11748398 -191337134 - MER5A DNA MER1_type -4 185 7 1442 273 83 53 chr5 11748507 11749112 -191336420 + MER21B LTR ERV1 189 811 -52 269 170 21 85 chr5 11749210 11749304 -191336228 + (CATTG)n Simple_repeat Simple_repeat 1 88 0 616 277 15 29 chr5 11750411 11750606 -191334926 - MER20B DNA MER1_type -17 202 7 314 293 61 24 chr5 11750700 11750968 -191334564 + L1 LINE L1 2888 3163 -2983 268 245 60 119 chr5 11751007 11751158 -191334374 + LTR33A LTR ERVL 21 162 -361 305 200 0 15 chr5 11751397 11751462 -191334070 + LTR33A LTR ERVL 442 505 -18 248 235 0 0 chr5 11751461 11751512 -191334020 + LTR33A LTR ERVL 473 523 0 * 32 26 0 0 chr5 11751625 11751664 -191333868 + AT_rich Low_complexity Low_complexity 1 39 0 320 281 63 37 chr5 11751904 11752210 -191333322 + L1 LINE L1 3687 3999 -2147 239 293 0 0 chr5 11752218 11752293 -191333239 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 28 29 0 0 chr5 11752349 11752384 -191333148 + AT_rich Low_complexity Low_complexity 1 35 0 674 113 0 10 chr5 11753150 11753247 -191332285 + MER4A LTR ERV1 1 96 -568 2715 107 12 12 chr5 11753248 11753650 -191331882 + MER4A LTR ERV1 263 664 0 2284 51 24 0 chr5 11754607 11754899 -191330633 + AluY SINE Alu 1 299 -12 645 161 0 8 chr5 11754900 11755018 -191330514 - MER5A DNA MER1_type -54 135 19 360 0 0 0 chr5 11756018 11756058 -191329474 + (CA)n Simple_repeat Simple_repeat 1 40 0 2149 207 153 56 chr5 11756512 11757359 -191328173 + LTR1B LTR ERV1 1 826 0 445 220 164 95 chr5 11757627 11757859 -191327673 + MLT2B1 LTR ERVL 265 512 -8 372 318 48 16 chr5 11759518 11759707 -191325825 + L3 LINE CR1 753 947 -630 180 111 0 0 chr5 11760230 11760257 -191325275 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 23 0 0 0 chr5 11763677 11763700 -191321832 + AT_rich Low_complexity Low_complexity 1 23 0 355 131 0 0 chr5 11765010 11765071 -191320461 - L1MA4 LINE L1 -5 6295 6235 198 339 0 0 chr5 11765711 11765776 -191319756 + MIR3 SINE MIR 144 208 0 197 162 0 27 chr5 11767741 11767778 -191317754 - L2 LINE L2 -10 3303 3268 707 227 54 125 chr5 11768198 11768550 -191316982 - MER46C DNA MER2_type -5 333 7 295 317 49 28 chr5 11768644 11768786 -191316746 - MIR3 SINE MIR -28 180 36 276 279 60 117 chr5 11769323 11769656 -191315876 + L2 LINE L2 2958 3271 -1 317 95 0 0 chr5 11770035 11770077 -191315455 + L2 LINE L2 3261 3302 -11 194 293 0 52 chr5 11770334 11770392 -191315140 - L3 LINE CR1 -123 1454 1400 2169 139 0 3 chr5 11771869 11772171 -191313361 - AluSc SINE Alu -8 301 1 4732 112 4 8 chr5 11772715 11773428 -191312104 + L1PA13 LINE L1 5452 6161 -2 2326 97 3 0 chr5 11773858 11774158 -191311374 + AluSx SINE Alu 1 301 -11 973 259 79 36 chr5 11776106 11776716 -191308816 - L1MC5 LINE L1 -36 7925 7290 451 281 6 11 chr5 11776850 11777028 -191308504 - L1MC5 LINE L1 -733 7228 7052 244 211 33 22 chr5 11777094 11777184 -191308348 - L1MC4 LINE L1 -1098 6944 6854 3796 77 10 27 chr5 11777194 11777428 -191308104 - LTR10C LTR ERV1 -37 596 360 2829 13 0 0 chr5 11777428 11777741 -191307791 - AluYb8 SINE Alu -5 313 1 3796 77 10 27 chr5 11777741 11778087 -191307445 - LTR10C LTR ERV1 -273 360 1 282 233 26 86 chr5 11778095 11778211 -191307321 - L1MC5 LINE L1 -1191 6770 6662 23 33 0 0 chr5 11778237 11778267 -191307265 + AT_rich Low_complexity Low_complexity 1 30 0 672 250 75 4 chr5 11778722 11778950 -191306582 - L1MC5 LINE L1 -1866 5942 5699 337 115 0 0 chr5 11778958 11779010 -191306522 - MADE1 DNA Mariner 0 80 29 315 0 0 0 chr5 11779209 11779244 -191306288 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 290 105 9 chr5 11779521 11779753 -191305779 + MIR3 SINE MIR 4 256 -6 2388 111 6 6 chr5 11780216 11780566 -191304966 + THE1B LTR MaLR 3 352 -12 887 201 8 72 chr5 11780575 11780838 -191304694 + MER4A LTR ERV1 1 246 -418 525 253 28 75 chr5 11780863 11781131 -191304401 + MER4C LTR ERV1 208 290 -175 2095 114 3 13 chr5 11781131 11781430 -191304102 - AluSc SINE Alu -13 296 1 525 253 28 75 chr5 11781430 11781599 -191303933 + MER4C LTR ERV1 290 465 0 189 304 89 13 chr5 11781600 11781679 -191303853 + MIR SINE MIR 58 142 -66 2298 88 7 3 chr5 11782161 11782457 -191303075 + AluSg SINE Alu 1 297 -13 26 101 0 0 chr5 11782953 11783042 -191302490 + AT_rich Low_complexity Low_complexity 1 89 0 1813 156 21 15 chr5 11783091 11783419 -191302113 - L1PA16 LINE L1 0 6166 5837 33 73 0 0 chr5 11784165 11784233 -191301299 + AT_rich Low_complexity Low_complexity 1 68 0 410 65 16 0 chr5 11784390 11784452 -191301080 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 214 267 58 33 chr5 11785979 11786099 -191299433 + MIR SINE MIR 118 240 -22 2447 73 3 0 chr5 11786290 11786591 -191298941 + AluY SINE Alu 1 302 -9 1636 191 36 25 chr5 11787256 11787592 -191297940 + L1MA4 LINE L1 5896 6238 -62 3168 201 27 60 chr5 11787592 11788446 -191297086 + LTR1B LTR ERV1 1 826 0 1636 191 36 25 chr5 11788446 11788502 -191297030 + L1MA4 LINE L1 6238 6292 -8 350 237 10 9 chr5 11789224 11789334 -191296198 + L1PB1 LINE L1 4985 5094 -1052 2793 19 27 0 chr5 11789335 11789701 -191295831 - L1P LINE L1 -944 5202 4827 * 3876 11 0 0 chr5 11789679 11790138 -191295394 + L1PA2 LINE L1 5693 6151 -4 3514 113 40 3 chr5 11790150 11790843 -191294689 + L1PB1 LINE L1 5083 5791 -360 308 202 32 75 chr5 11790856 11790950 -191294582 - L1MC4 LINE L1 -1339 6703 6614 190 130 0 43 chr5 11790953 11790999 -191294533 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 2129 140 22 8 chr5 11791005 11791019 -191294513 + L1PB1 LINE L1 5782 5794 -357 194 88 0 29 chr5 11791019 11791053 -191294479 + (TA)n Simple_repeat Simple_repeat 2 34 0 2129 140 22 8 chr5 11791053 11791402 -191294130 + L1PB1 LINE L1 5794 6150 -1 282 216 41 21 chr5 11791528 11791625 -191293907 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1717 147 38 42 chr5 11792044 11792357 -191293175 + AluSx SINE Alu 1 312 0 260 332 39 19 chr5 11792560 11792768 -191292764 + L1ME3A LINE L1 114 325 -6071 212 128 21 21 chr5 11793189 11793236 -191292296 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 3210 261 75 45 chr5 11793373 11794302 -191291230 + L1ME3A LINE L1 1624 2524 -3691 1806 63 14 5 chr5 11794302 11794558 -191290974 + AluY SINE Alu 60 317 0 3210 261 75 45 chr5 11794558 11796079 -191289453 + L1ME3A LINE L1 2524 4117 -2098 444 278 47 21 chr5 11796124 11796358 -191289174 + L1ME2 LINE L1 5924 6163 -1 5922 215 43 28 chr5 11798600 11799967 -191285565 + L1MC/D LINE L1 3524 4869 -1440 2193 124 0 16 chr5 11799967 11800282 -191285250 + AluSx SINE Alu 2 311 -1 5922 215 43 28 chr5 11800282 11800300 -191285232 + L1MC/D LINE L1 4869 4885 -1424 2771 7 0 0 chr5 11800300 11800603 -191284929 - AluYa5 SINE Alu -8 303 1 5922 215 43 28 chr5 11800603 11801219 -191284313 + L1MC/D LINE L1 4885 5566 -743 420 266 73 78 chr5 11801278 11801635 -191283897 + L1ME3A LINE L1 4999 5353 -862 1031 263 163 48 chr5 11801673 11802427 -191283105 + L1ME3A LINE L1 5391 6231 -8 307 269 74 28 chr5 11802504 11802612 -191282920 - MIR3 SINE MIR -8 200 88 24 0 0 0 chr5 11804355 11804379 -191281153 + AT_rich Low_complexity Low_complexity 1 24 0 485 167 9 26 chr5 11805092 11805206 -191280326 + L1MA10 LINE L1 6223 6334 0 37 39 0 0 chr5 11805353 11805404 -191280128 + AT_rich Low_complexity Low_complexity 1 51 0 420 226 189 6 chr5 11805553 11805717 -191279815 + MLT1J2 LTR MaLR 190 383 -67 332 124 22 45 chr5 11806004 11806093 -191279439 + GA-rich Low_complexity Low_complexity 2 88 0 180 0 0 0 chr5 11806620 11806640 -191278892 + (GA)n Simple_repeat Simple_repeat 1 20 0 407 310 44 44 chr5 11806958 11807116 -191278416 + MER5A DNA MER1_type 30 187 -2 207 340 30 0 chr5 11808053 11808153 -191277379 - MIR SINE MIR -1 261 159 219 279 38 56 chr5 11808740 11808910 -191276622 - MER5B DNA MER1_type -7 182 2 203 333 93 47 chr5 11809198 11809327 -191276205 + L2 LINE L2 3137 3271 -1 528 268 39 15 chr5 11809787 11809950 -191275582 + MIR SINE MIR 3 167 -58 2077 106 0 45 chr5 11810490 11810802 -191274730 - AluSg1 SINE Alu -11 298 1 227 267 0 0 chr5 11812387 11812432 -191273100 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2001 139 10 3 chr5 11812630 11812925 -191272607 - AluJb SINE Alu -15 297 1 225 0 0 0 chr5 11813583 11813608 -191271924 + (CA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr5 11813725 11813754 -191271778 + AT_rich Low_complexity Low_complexity 1 29 0 1205 197 9 0 chr5 11814548 11814771 -191270761 + AluJb SINE Alu 86 310 -2 2321 216 70 4 chr5 11815457 11815984 -191269548 - MER68 LTR ERV1 0 562 1 248 326 167 8 chr5 11818079 11818211 -191267321 - MIR3 SINE MIR -46 162 10 21 36 0 0 chr5 11820054 11820082 -191265450 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 11820411 11820445 -191265087 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 333 63 56 chr5 11821727 11821853 -191263679 - MIR SINE MIR -122 140 14 209 220 0 20 chr5 11822947 11822997 -191262535 + (CA)n Simple_repeat Simple_repeat 2 50 0 221 301 14 14 chr5 11823676 11823749 -191261783 - L2 LINE L2 -1 3271 3199 280 405 7 0 chr5 11825891 11826039 -191259493 - MIR SINE MIR -109 153 5 345 279 78 23 chr5 11827469 11827646 -191257886 + MIR SINE MIR 4 187 -73 7421 164 36 13 chr5 11830636 11831914 -191253618 + L1M1 LINE L1 14 1320 -6245 * 11028 151 29 23 chr5 11831913 11832995 -191252537 + L1M1 LINE L1 2252 3325 -4240 2317 65 0 0 chr5 11832995 11833272 -191252260 + AluY SINE Alu 22 298 -13 11028 151 29 23 chr5 11833272 11835791 -191249741 + L1M1 LINE L1 3325 5887 -1678 2921 129 50 58 chr5 11835771 11836069 -191249463 + L1M1 LINE L1 6453 6752 -972 * 2212 113 7 0 chr5 11836069 11836378 -191249154 + AluSp SINE Alu 1 311 -2 2921 129 50 58 chr5 11836378 11836812 -191248720 + L1M1 LINE L1 6752 7197 -527 233 174 0 29 chr5 11837965 11838034 -191247498 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 342 113 68 0 chr5 11838039 11838172 -191247360 + (TA)n Simple_repeat Simple_repeat 1 142 0 35 0 0 0 chr5 11838172 11838207 -191247325 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 11838361 11838394 -191247138 + (TAA)n Simple_repeat Simple_repeat 2 34 0 473 196 0 59 chr5 11838738 11838840 -191246692 - MER3 DNA MER1_type -1 208 113 458 191 159 48 chr5 11838845 11838971 -191246561 - MER3 DNA MER1_type -26 183 44 533 319 14 93 chr5 11839454 11839871 -191245661 - L2 LINE L2 -1 3312 2929 414 85 0 0 chr5 11840444 11840503 -191245029 + (TG)n Simple_repeat Simple_repeat 1 59 0 551 261 84 51 chr5 11841348 11841659 -191243873 + L1MD2 LINE L1 5702 6022 -337 * 1340 234 75 7 chr5 11841388 11841802 -191243730 + L1MB8 LINE L1 5737 6178 0 2148 82 0 0 chr5 11841814 11842081 -191243451 + AluY SINE Alu 44 310 -1 334 64 21 0 chr5 11843381 11843428 -191242104 - THE1C LTR MaLR -322 53 6 442 81 0 27 chr5 11843955 11844029 -191241503 + (TCTCC)n Simple_repeat Simple_repeat 2 73 0 284 304 71 76 chr5 11844345 11844569 -191240963 + MIR SINE MIR 37 259 -3 300 303 97 0 chr5 11847258 11847403 -191238129 - MIR SINE MIR -6 256 98 249 221 0 0 chr5 11848366 11848434 -191237098 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 331 273 16 50 chr5 11848682 11848803 -191236729 - L2 LINE L2 -238 3034 2918 28 29 0 0 chr5 11849485 11849520 -191236012 + AT_rich Low_complexity Low_complexity 1 35 0 388 216 41 10 chr5 11850376 11850473 -191235059 - L2 LINE L2 0 3313 3214 361 301 103 10 chr5 11850525 11850728 -191234804 + LTR50 LTR ERVL 19 240 -555 694 231 231 0 chr5 11851111 11851375 -191234157 + LTR50 LTR ERVL 471 795 0 450 227 82 0 chr5 11851887 11851997 -191233535 + LTR50 LTR ERVL 9 127 -668 292 304 40 40 chr5 11852047 11852172 -191233360 + MIR3 SINE MIR 30 154 -54 193 0 0 0 chr5 11853756 11853780 -191231752 + MIR SINE MIR 129 152 -110 2152 313 23 37 chr5 11853837 11854674 -191230858 + L1M4b LINE L1 11 835 -6024 1845 186 65 35 chr5 11854675 11855012 -191230520 + L1MA9 LINE L1 5833 6158 -154 483 18 0 0 chr5 11855012 11855068 -191230464 + (CA)n Simple_repeat Simple_repeat 1 56 0 1845 186 65 35 chr5 11855068 11855123 -191230409 + L1MA9 LINE L1 6158 6210 -102 222 37 0 0 chr5 11855123 11855150 -191230382 + (TG)n Simple_repeat Simple_repeat 2 28 0 1845 186 65 35 chr5 11855150 11855185 -191230347 + L1MA9 LINE L1 6210 6274 -38 744 226 111 9 chr5 11855196 11855209 -191230323 + L1M4b LINE L1 1546 1556 -5299 2027 135 0 10 chr5 11855209 11855546 -191229986 + AluSg SINE Alu 1 310 0 744 226 111 9 chr5 11855546 11855819 -191229713 + L1M4b LINE L1 1556 1855 -5000 416 185 6 92 chr5 11855860 11855970 -191229562 + L1M4b LINE L1 2087 2205 -4753 2144 169 45 85 chr5 11855970 11856462 -191229070 + MER70A LTR ERVL 1 472 0 416 185 6 92 chr5 11856462 11856486 -191229046 + L1M4b LINE L1 2205 2609 -4349 * 3053 177 80 49 chr5 11856481 11857222 -191228310 + L1MB7 LINE L1 5421 6184 0 1302 245 40 0 chr5 11861187 11861514 -191224018 + MER63B DNA MER1_type 1 340 -96 315 260 173 36 chr5 11862057 11862334 -191223198 + L1ME LINE L1 5522 5836 -285 7409 59 10 0 chr5 11862611 11863661 -191221871 - L1PA7 LINE L1 -3 6151 5096 2205 114 3 18 chr5 11863663 11863995 -191221537 - L1PA7 LINE L1 -1127 5019 4693 324 307 203 63 chr5 11866113 11866478 -191219054 - L1M2 LINE L1 -5908 941 526 323 298 13 25 chr5 11866479 11866637 -191218895 + G-rich Low_complexity Low_complexity 2 157 0 3946 149 99 45 chr5 11867422 11867780 -191217752 - pTR5 LTR ERV1 0 2606 2269 2909 0 0 0 chr5 11867780 11868087 -191217445 + AluYa5 SINE Alu 1 307 -4 3946 149 99 45 chr5 11868087 11869145 -191216387 - pTR5 LTR ERV1 -337 2269 1524 281 276 69 41 chr5 11870216 11870381 -191215151 - Charlie8 DNA MER1_type -2153 264 104 839 198 135 21 chr5 11870551 11870743 -191214789 + MER58A DNA MER1_type 4 217 -7 183 100 0 0 chr5 11870843 11870873 -191214659 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 34 72 0 0 chr5 11872144 11872213 -191213319 + AT_rich Low_complexity Low_complexity 1 69 0 991 286 95 24 chr5 11872422 11872929 -191212603 - MLT1H LTR MaLR 0 549 7 512 209 0 0 chr5 11873306 11873411 -191212121 + MLT1B LTR MaLR 31 135 -255 269 292 49 49 chr5 11873930 11874074 -191211458 - MER5B DNA MER1_type -18 160 17 831 158 8 0 chr5 11874934 11875054 -191210478 - FLAM_C SINE Alu -21 122 2 2215 89 4 0 chr5 11875949 11876259 -191209273 + AluSp SINE Alu 1 311 0 622 232 33 7 chr5 11876374 11876525 -191209007 - MER69A DNA AcHobo -1 176 22 252 0 0 0 chr5 11876525 11876553 -191208979 + (TG)n Simple_repeat Simple_repeat 1 28 0 2228 134 132 5 chr5 11877541 11877921 -191207611 - MSTA LTR MaLR 0 428 1 376 285 72 80 chr5 11878214 11878640 -191206892 - L1 LINE L1 -1359 4787 4357 601 221 58 96 chr5 11878690 11878898 -191206634 + MIR SINE MIR 21 220 -42 24 0 0 0 chr5 11878960 11878984 -191206548 + AT_rich Low_complexity Low_complexity 1 24 0 356 326 86 29 chr5 11879068 11879381 -191206151 - L1 LINE L1 -1908 4238 3908 21 36 0 0 chr5 11879657 11879685 -191205847 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 11879731 11879759 -191205773 + AT_rich Low_complexity Low_complexity 1 28 0 1755 190 54 2 chr5 11879805 11880229 -191205303 + LTR53 LTR ERVL 1 519 0 810 143 45 184 chr5 11880477 11880700 -191204832 - 7SK RNA RNA -1 192 1 25 31 0 0 chr5 11881008 11881040 -191204492 + AT_rich Low_complexity Low_complexity 1 32 0 1590 210 7 3 chr5 11881145 11881445 -191204087 - AluJo SINE Alu -11 301 1 354 351 71 37 chr5 11882192 11882514 -191203018 - HAL1b LINE L1 -784 564 232 29 0 5 0 chr5 11883126 11883183 -191202349 + AT_rich Low_complexity Low_complexity 1 29 0 461 240 16 32 chr5 11883247 11883372 -191202160 + MIR SINE MIR 118 240 -22 35 63 0 0 chr5 11883391 11883454 -191202078 + AT_rich Low_complexity Low_complexity 1 63 0 253 301 24 0 chr5 11884751 11884834 -191200698 + L2 LINE L2 3227 3311 -2 261 0 0 0 chr5 11885219 11885248 -191200284 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 565 330 48 21 chr5 11885757 11886090 -191199442 + L1M2 LINE L1 11 352 -6497 11108 238 20 34 chr5 11886848 11889476 -191196056 + L1PA12 LINE L1 2231 4960 -2624 1988 134 108 15 chr5 11889476 11889819 -191195713 + THE1C LTR MaLR 1 375 0 11108 238 20 34 chr5 11889819 11890921 -191194611 + L1PA12 LINE L1 4960 6076 -1508 13000 150 18 25 chr5 11890929 11893170 -191192362 + L1P LINE L1 11 2237 -3909 6058 166 4 10 chr5 11893170 11894366 -191191166 + L1MA4 LINE L1 5105 6294 -6 2370 205 8 149 chr5 11895441 11895523 -191190009 - MLT2B3 LTR ERVL 0 515 423 677 86 0 17 chr5 11895523 11895639 -191189893 + (TAGA)n Simple_repeat Simple_repeat 1 114 0 2370 205 8 149 chr5 11895639 11896141 -191189391 - MLT2B3 LTR ERVL -92 423 13 279 203 0 0 chr5 11896668 11896727 -191188805 + (CA)n Simple_repeat Simple_repeat 1 59 0 22 103 0 0 chr5 11897577 11897655 -191187877 + AT_rich Low_complexity Low_complexity 1 78 0 320 308 65 54 chr5 11897744 11898098 -191187434 + L1MEd LINE L1 846 1203 -4916 748 202 75 144 chr5 11898124 11898715 -191186817 - LTR34 LTR ERV1 -4 695 135 464 160 57 19 chr5 11898788 11898894 -191186638 - MER4C LTR ERV1 -353 112 3 1413 192 63 63 chr5 11898952 11899332 -191186200 - MSTD LTR MaLR -2 394 15 218 189 0 0 chr5 11901202 11901239 -191184293 + CT-rich Low_complexity Low_complexity 2 38 0 201 273 105 70 chr5 11901296 11901468 -191184064 + MIR SINE MIR 30 207 -55 2553 222 21 9 chr5 11901876 11902408 -191183124 - MER74A LTR ERVL -18 540 3 384 304 71 30 chr5 11904387 11904555 -191180977 + MIR SINE MIR 68 242 -20 279 79 0 0 chr5 11904568 11904606 -191180926 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 631 218 15 0 chr5 11905783 11905916 -191179616 + L1MA10 LINE L1 4685 4819 -1327 * 3488 204 7 59 chr5 11905912 11906779 -191178753 + L1MA10 LINE L1 5512 6333 -1 1655 187 126 6 chr5 11907796 11908122 -191177410 + MLT1A1 LTR MaLR 1 365 0 259 160 32 96 chr5 11908654 11908748 -191176784 - Looper DNA T2_type -97 1461 1374 644 175 10 0 chr5 11908796 11908893 -191176639 + MER2 DNA MER2_type 1 98 -247 1011 251 105 19 chr5 11908893 11909208 -191176324 - MER2 DNA MER2_type 0 345 4 652 235 39 59 chr5 11909209 11909328 -191176204 + MER2 DNA MER2_type 95 215 -130 2168 124 0 0 chr5 11909328 11909627 -191175905 - AluSx SINE Alu -13 299 1 652 235 39 59 chr5 11909627 11909762 -191175770 + MER2 DNA MER2_type 215 344 -1 203 315 41 0 chr5 11910013 11910086 -191175446 - MER91 DNA MER1_type 0 140 65 319 246 37 59 chr5 11910191 11910378 -191175154 - L1MEd LINE L1 -4891 1228 1046 1164 205 43 26 chr5 11910597 11910899 -191174633 - L1MC3 LINE L1 0 7785 7479 2271 114 0 0 chr5 11911154 11911452 -191174080 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 11911461 11911482 -191174050 + AT_rich Low_complexity Low_complexity 1 21 0 1870 125 39 11 chr5 11911501 11911782 -191173750 - AluSx SINE Alu -13 299 11 2031 157 80 27 chr5 11911932 11912308 -191173224 + MSTD LTR MaLR 1 396 0 22 35 0 0 chr5 11912457 11912486 -191173046 + AT_rich Low_complexity Low_complexity 1 29 0 715 285 191 19 chr5 11912648 11913066 -191172466 + LTR16C LTR ERVL 2 491 0 262 305 69 30 chr5 11913157 11913288 -191172244 - MIR3 SINE MIR -66 142 7 6920 82 6 6 chr5 11914919 11915818 -191169714 + HERVL-A2 LTR ERVL 4756 5654 0 2209 160 36 31 chr5 11915818 11916366 -191169166 + MLT2A2 LTR ERVL 1 554 0 217 191 0 43 chr5 11917021 11917068 -191168464 + GA-rich Low_complexity Low_complexity 4 48 0 225 0 0 0 chr5 11917332 11917357 -191168175 + (TG)n Simple_repeat Simple_repeat 2 26 0 2001 230 91 48 chr5 11917357 11917965 -191167567 - MER21B LTR ERV1 -86 777 144 355 279 23 0 chr5 11918080 11918166 -191167366 - MER21B LTR ERV1 -764 99 12 208 211 58 19 chr5 11918572 11918624 -191166908 + MIR SINE MIR 99 153 -55 1977 181 68 32 chr5 11918654 11919097 -191166435 - LTR2B LTR ERV1 0 490 32 1251 244 54 21 chr5 11919616 11919948 -191165584 - LTR48B LTR ERV1 -4 640 298 4203 169 80 38 chr5 11919949 11920923 -191164609 - LTR48B-int LTR ERV1 -508 5823 4809 375 152 0 15 chr5 11920921 11920987 -191164545 - LTR48B-int LTR ERV1 -4475 1856 1792 * 258 159 23 0 chr5 11921076 11921120 -191164412 - LTR48B-int LTR ERV1 -4699 1632 1588 299 247 11 22 chr5 11921673 11921762 -191163770 - LTR48B-int LTR ERV1 -4954 1377 1290 4766 195 53 86 chr5 11921813 11923145 -191162387 - LTR48B-int LTR ERV1 -5042 1289 1 2668 171 79 53 chr5 11923147 11923236 -191162296 - LTR48B LTR ERV1 0 644 559 2949 84 19 11 chr5 11923236 11923607 -191161925 - THE1C LTR MaLR 0 375 2 2668 171 79 53 chr5 11923607 11923916 -191161616 - LTR48B LTR ERV1 -85 559 222 2433 83 0 3 chr5 11923916 11924228 -191161304 + AluY SINE Alu 1 311 0 2668 171 79 53 chr5 11924228 11924435 -191161097 - LTR48B LTR ERV1 -422 222 22 704 270 89 31 chr5 11924601 11924860 -191160672 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 11926037 11926067 -191159465 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 11926099 11926297 -191159235 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 11926301 11926327 -191159205 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 11926872 11926916 -191158616 - MIR SINE MIR -64 198 156 3342 159 35 0 chr5 11926916 11927451 -191158081 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 11927451 11927579 -191157953 - MIR SINE MIR -106 156 23 5367 139 33 20 chr5 11928788 11929670 -191155862 + MER4D LTR ERV1 3 895 -8 660 111 0 0 chr5 11929965 11930064 -191155468 + (TA)n Simple_repeat Simple_repeat 1 99 0 2929 81 103 5 chr5 11930065 11930473 -191155059 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 11930474 11930517 -191155015 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 11930674 11930767 -191154765 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 11930948 11931220 -191154312 + L1MD3 LINE L1 7547 7759 -236 2236 75 0 0 chr5 11931220 11931498 -191154034 + AluY SINE Alu 26 303 -8 1040 153 38 169 chr5 11931498 11931597 -191153935 + L1MD3 LINE L1 7759 7869 -126 913 223 98 53 chr5 11931616 11932183 -191153349 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 11932183 11932306 -191153226 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 11932469 11932556 -191152976 + MIR SINE MIR 58 146 -62 1376 214 28 64 chr5 11932556 11932817 -191152715 - MLT1A2 LTR MaLR 0 374 130 1912 120 223 11 chr5 11932817 11933167 -191152365 - MSTA LTR MaLR -4 424 1 1376 214 28 64 chr5 11933167 11933293 -191152239 - MLT1A2 LTR MaLR -244 130 1 2261 164 46 21 chr5 11934229 11934746 -191150786 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 11937782 11937814 -191147718 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 11937841 11937998 -191147534 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 11937974 11938171 -191147361 - Tigger2 DNA MER2_type -2509 209 8 885 150 44 12 chr5 11938441 11938601 -191146931 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 11939900 11939923 -191145609 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 11939945 11940048 -191145484 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 11940138 11940176 -191145356 - MER5A DNA MER1_type -152 37 1 602 195 109 35 chr5 11940197 11940371 -191145161 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 11941548 11941855 -191143677 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 11943379 11943435 -191142097 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 11943874 11943896 -191141636 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 11945177 11945371 -191140161 + L1PA5 LINE L1 5957 6150 -4 24 32 0 0 chr5 11945417 11945448 -191140084 + AT_rich Low_complexity Low_complexity 1 31 0 358 235 99 0 chr5 11945688 11945769 -191139763 - MER117 DNA MER1_type -107 90 2 925 181 0 6 chr5 11945991 11946151 -191139381 - AluSg/x SINE Alu -38 272 114 636 174 36 36 chr5 11946262 11946400 -191139132 - AluSg/x SINE Alu -81 229 92 1695 244 17 3 chr5 11948365 11948725 -191136807 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 11949193 11949260 -191136272 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 11949643 11949805 -191135727 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 11949841 11950040 -191135492 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 11950275 11950486 -191135046 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 11951111 11951714 -191133818 - L1MC4 LINE L1 -248 7794 7179 589 304 116 42 chr5 11951745 11952203 -191133329 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 11952263 11952318 -191133214 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 11953795 11953874 -191131658 + CT-rich Low_complexity Low_complexity 2 77 0 440 346 33 22 chr5 11954134 11954351 -191131181 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 11955671 11955710 -191129822 + AT_rich Low_complexity Low_complexity 1 39 0 2184 108 0 3 chr5 11957132 11957427 -191128105 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 11957520 11957795 -191127737 + MER33 DNA MER1_type 3 267 -2318 2226 80 3 13 chr5 11957795 11958095 -191127437 - AluSp SINE Alu -16 297 1 1137 210 30 63 chr5 11958095 11958152 -191127380 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 11958356 11958440 -191127092 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 11961491 11961534 -191123998 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 11961590 11961617 -191123915 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 11961933 11961979 -191123553 + (TA)n Simple_repeat Simple_repeat 2 47 0 5406 110 16 21 chr5 11962454 11963282 -191122250 + L1PA13 LINE L1 5333 6162 -1 263 136 0 0 chr5 11963323 11963367 -191122165 - L1MA9 LINE L1 -35 6277 6234 445 152 15 38 chr5 11963438 11963570 -191121962 + CT-rich Low_complexity Low_complexity 2 130 0 401 206 10 0 chr5 11963673 11963770 -191121762 + CT-rich Low_complexity Low_complexity 3 100 0 358 197 0 0 chr5 11963770 11963836 -191121696 - L1MA8 LINE L1 -130 6161 6096 2211 304 140 22 chr5 11965452 11966949 -191118583 + L2 LINE L2 1382 3107 -206 2656 111 3 11 chr5 11966949 11967327 -191118205 + THE1C LTR MaLR 1 375 0 2211 304 140 22 chr5 11967327 11967552 -191117980 + L2 LINE L2 3107 3304 -9 351 200 16 96 chr5 11967613 11967738 -191117794 - MIR SINE MIR -138 124 10 192 314 35 47 chr5 11967757 11967778 -191117754 - L2 LINE L2 -54 3218 3198 1925 193 85 9 chr5 11967778 11968203 -191117329 - MSTB2 LTR MaLR 0 457 1 192 314 35 47 chr5 11968203 11968267 -191117265 - L2 LINE L2 -74 3198 3134 1592 243 49 27 chr5 11968502 11968991 -191116541 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 11969302 11969348 -191116184 + T-rich Low_complexity Low_complexity 3 47 0 2319 57 0 0 chr5 11970068 11970401 -191115131 - AluY SINE Alu 0 333 1 2290 107 0 0 chr5 11970471 11970771 -191114761 - AluY SINE Alu -11 300 1 215 284 210 33 chr5 11970794 11971037 -191114495 - L2 LINE L2 -527 2787 2502 26 93 0 0 chr5 11971706 11971781 -191113751 + AT_rich Low_complexity Low_complexity 1 75 0 1616 179 14 0 chr5 11972212 11972526 -191113006 - AluJb SINE Alu 0 318 1 1108 278 65 15 chr5 11973839 11974242 -191111290 + LTR16A LTR ERVL 25 447 -3 1832 132 30 40 chr5 11974984 11975356 -191110176 - THE1C LTR MaLR 0 375 8 5712 198 14 50 chr5 11975888 11975905 -191109627 - L1P3 LINE L1 -4290 2171 2155 14056 128 7 6 chr5 11975905 11979000 -191106532 - L1PA8A LINE L1 -6 6125 3030 5712 198 14 50 chr5 11979000 11980878 -191104654 - L1P3 LINE L1 -4306 2155 259 685 198 16 101 chr5 11981112 11981360 -191104172 + LTR12 LTR ERV1 238 464 -250 1517 104 3 97 chr5 11981389 11981677 -191103855 - L1P3 LINE L1 -5613 262 2 189 215 62 62 chr5 11982434 11982499 -191103033 - MIR SINE MIR -88 174 110 715 215 34 10 chr5 11982825 11983030 -191102502 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 11983945 11983974 -191101558 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 11984424 11984445 -191101087 + AT_rich Low_complexity Low_complexity 1 21 0 2052 147 3 3 chr5 11985611 11985911 -191099621 + AluJb SINE Alu 4 303 -9 13156 128 8 3 chr5 11986103 11988996 -191096536 + L1PA8A LINE L1 3229 6125 -6 1885 131 24 40 chr5 11989611 11989985 -191095547 + THE1C LTR MaLR 8 375 0 1108 278 65 15 chr5 11990727 11991130 -191094402 - LTR16A LTR ERVL -3 447 25 1603 179 14 0 chr5 11992443 11992769 -191092763 + AluJb SINE Alu 1 330 0 26 93 0 0 chr5 11993200 11993275 -191092257 + AT_rich Low_complexity Low_complexity 1 75 0 212 282 212 33 chr5 11993945 11994186 -191091346 + L2 LINE L2 2502 2785 -529 2281 107 0 0 chr5 11994211 11994510 -191091022 + AluY SINE Alu 1 299 -12 2320 57 0 0 chr5 11994580 11994933 -191090599 + AluY SINE Alu 1 353 0 208 174 0 22 chr5 11995653 11995699 -191089833 + A-rich Low_complexity Low_complexity 3 47 0 1631 226 26 94 chr5 11996034 11996497 -191089035 - L1M4 LINE L1 -934 5448 5050 306 87 0 0 chr5 11996497 11996543 -191088989 + (TA)n Simple_repeat Simple_repeat 2 47 0 1631 226 26 94 chr5 11996543 11996801 -191088731 - L1M4 LINE L1 -1332 5050 4776 4790 161 48 25 chr5 11996810 11997920 -191087612 - L1MA7 LINE L1 0 6291 5158 229 218 0 0 chr5 11997980 11998035 -191087497 - L1M4 LINE L1 -3921 2463 2409 417 272 159 46 chr5 11998037 11998320 -191087212 - L1M4 LINE L1 -786 5360 5046 1915 144 57 28 chr5 11998326 11998680 -191086852 - THE1B LTR MaLR 0 364 1 10030 106 24 35 chr5 11998680 11999776 -191085756 - THE1B-int LTR MaLR 0 1580 505 2555 82 14 6 chr5 11999776 12000129 -191085403 - L1PA8A LINE L1 0 6131 5776 10030 106 24 35 chr5 12000129 12000628 -191084904 - THE1B-int LTR MaLR -1075 505 2 1747 171 39 15 chr5 12000629 12000963 -191084569 - THE1B LTR MaLR 0 364 23 5672 61 16 0 chr5 12000966 12001899 -191083633 - L1PA7 LINE L1 -115 6039 5092 2111 192 17 28 chr5 12001897 12002821 -191082711 + L1PA7 LINE L1 3757 5115 -1031 * 1026 243 117 23 chr5 12002828 12003196 -191082336 - MSTD LTR MaLR 0 396 1 4192 208 32 23 chr5 12003199 12004649 -191080883 + L1MA10 LINE L1 4438 5874 -460 2026 174 13 16 chr5 12004649 12005023 -191080509 + THE1C LTR MaLR 3 375 0 9436 125 12 73 chr5 12005028 12006709 -191078823 + THE1C-int LTR MaLR 1 1580 0 2270 140 11 21 chr5 12006709 12007088 -191078444 + THE1C LTR MaLR 1 375 0 4192 208 32 23 chr5 12007088 12007501 -191078031 + L1MA10 LINE L1 5876 6332 -2 315 223 19 19 chr5 12007494 12007597 -191077935 - L1M4 LINE L1 -1239 4907 4805 * 323 109 0 0 chr5 12007762 12007817 -191077715 - L1MA3 LINE L1 -1 6304 6250 617 269 90 54 chr5 12007834 12008448 -191077084 - L1MEc LINE L1 -4934 1462 827 2171 149 68 13 chr5 12008470 12008866 -191076666 + MSTB LTR MaLR 9 426 0 565 310 125 48 chr5 12009591 12010261 -191075271 + L2 LINE L2 2567 3283 -30 229 203 29 14 chr5 12011257 12011326 -191074206 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 1451 140 0 0 chr5 12012151 12012365 -191073167 - AluSg/x SINE Alu -15 297 84 1360 110 24 89 chr5 12012994 12013240 -191072292 + MER30 DNA MER1_type 1 230 0 744 226 92 36 chr5 12013537 12013958 -191071574 + MLT1D LTR MaLR 21 501 -4 327 203 0 0 chr5 12014287 12014356 -191071176 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 22 0 0 0 chr5 12015932 12015954 -191069578 + AT_rich Low_complexity Low_complexity 1 22 0 2247 105 0 25 chr5 12016435 12016749 -191068783 + AluSg SINE Alu 1 306 -4 324 294 81 48 chr5 12017251 12017647 -191067885 - L2 LINE L2 -174 3139 2734 307 319 93 30 chr5 12018354 12018624 -191066908 - L3 LINE CR1 -428 1149 863 2283 95 10 0 chr5 12019303 12019607 -191065925 - AluSp SINE Alu -6 307 1 3232 233 41 10 chr5 12021423 12022222 -191063310 + L1MB7 LINE L1 5352 6175 -9 428 0 19 0 chr5 12023029 12023081 -191062451 + (TG)n Simple_repeat Simple_repeat 2 54 0 221 309 37 0 chr5 12023787 12023868 -191061664 + L3 LINE CR1 1492 1575 -2 1416 230 69 34 chr5 12023942 12024384 -191061148 + MER31B LTR ERV1 3 657 -4 1047 213 58 5 chr5 12024384 12024537 -191060995 + MER20 DNA MER1_type 2 170 -49 234 62 0 0 chr5 12024537 12024569 -191060963 + (CA)n Simple_repeat Simple_repeat 1 32 0 1047 213 58 5 chr5 12024569 12024622 -191060910 + MER20 DNA MER1_type 170 219 0 358 252 106 31 chr5 12024798 12025059 -191060473 - MLT1J2 LTR MaLR -10 436 152 310 271 115 78 chr5 12026063 12026332 -191059200 - MLT1J2 LTR MaLR -65 385 107 1634 149 112 6 chr5 12026367 12026689 -191058843 - LTR18B LTR ERVL 0 614 259 1381 101 11 0 chr5 12026909 12027098 -191058434 - LTR18B LTR ERVL -423 191 1 270 292 42 0 chr5 12027098 12027189 -191058343 - MLT1J1 LTR MaLR -343 103 9 989 257 159 0 chr5 12029008 12029265 -191056267 - MER77 LTR ERV1 0 605 308 1064 232 62 77 chr5 12029383 12029719 -191055813 - MER77 LTR ERV1 -253 352 22 207 0 0 0 chr5 12030277 12030300 -191055232 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1762 158 36 4 chr5 12030572 12030851 -191054681 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 12031734 12031773 -191053759 - MLT2B1 LTR ERVL -1 413 378 255 61 0 0 chr5 12031773 12031806 -191053726 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 12031806 12032195 -191053337 - MLT2B1 LTR ERVL -36 378 1 264 312 8 48 chr5 12032977 12033102 -191052430 - L2 LINE L2 -13 3300 3181 528 265 139 0 chr5 12034677 12034843 -191050689 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 12035068 12035096 -191050436 + AT_rich Low_complexity Low_complexity 1 28 0 765 300 76 103 chr5 12036318 12036990 -191048542 + L3 LINE CR1 36 684 -893 5617 147 14 3 chr5 12036990 12038211 -191047321 + L1PA15 LINE L1 4933 6161 -4 765 300 76 103 chr5 12038211 12038351 -191047181 + L3 LINE CR1 684 826 -751 2408 161 48 22 chr5 12038414 12038831 -191046701 - MSTA LTR MaLR 0 428 1 332 285 46 39 chr5 12039166 12039296 -191046236 + L3 LINE CR1 1426 1556 -21 282 29 0 0 chr5 12039352 12039387 -191046145 + (CA)n Simple_repeat Simple_repeat 1 35 0 2273 101 0 3 chr5 12041390 12041688 -191043844 - AluSq SINE Alu -16 297 1 409 283 6 17 chr5 12042967 12043147 -191042385 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 205 309 14 7 chr5 12043166 12043305 -191042227 + (TATATG)n Simple_repeat Simple_repeat 3 142 0 414 293 17 0 chr5 12043395 12043569 -191041963 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 200 213 0 0 chr5 12043635 12043682 -191041850 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 210 333 7 20 chr5 12043756 12043906 -191041626 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 275 29 0 0 chr5 12045071 12045106 -191040426 + L1PA6 LINE L1 6111 6145 -9 1983 145 0 23 chr5 12045138 12045442 -191040090 - AluSx SINE Alu -15 297 1 191 310 17 0 chr5 12045681 12045739 -191039793 + L2 LINE L2 3214 3272 0 1491 139 31 5 chr5 12046453 12046676 -191038856 + MER30 DNA MER1_type 2 230 0 180 273 0 0 chr5 12047431 12047497 -191038035 + CT-rich Low_complexity Low_complexity 4 69 0 199 361 48 30 chr5 12047825 12047991 -191037541 - L2 LINE L2 -428 2886 2718 246 326 181 7 chr5 12047993 12048131 -191037401 + L2 LINE L2 3152 3313 0 332 351 89 0 chr5 12048857 12049025 -191036507 + MIR SINE MIR 8 190 -72 208 315 126 16 chr5 12049510 12049637 -191035895 - MIR SINE MIR -59 203 63 339 285 164 15 chr5 12050570 12050744 -191034788 + MIR SINE MIR 45 241 -21 2117 104 0 44 chr5 12050899 12051217 -191034315 - AluSx SINE Alu -8 304 1 9362 238 84 22 chr5 12051336 12056141 -191029391 - L1MC3 LINE L1 -14 7771 2638 2144 139 7 3 chr5 12056141 12056451 -191029081 + AluSx SINE Alu 1 311 -1 9362 238 84 22 chr5 12056451 12056672 -191028860 - L1MC3 LINE L1 -5147 2638 2432 1282 260 100 91 chr5 12056705 12057085 -191028447 + MLT1E2 LTR MaLR 1 392 -234 1009 203 124 95 chr5 12057085 12057538 -191027994 + MER31B LTR ERV1 1 466 0 1282 260 100 91 chr5 12057538 12057665 -191027867 + MLT1E2 LTR MaLR 392 516 -110 213 39 0 0 chr5 12059952 12059978 -191025554 + (TG)n Simple_repeat Simple_repeat 2 27 0 507 173 9 27 chr5 12060956 12061066 -191024466 + MER67D LTR ERV1 1 108 -406 344 188 25 12 chr5 12061101 12061181 -191024351 + MER67D LTR ERV1 430 510 -4 2299 154 35 31 chr5 12061609 12062158 -191023374 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 12063058 12063083 -191022449 + (TC)n Simple_repeat Simple_repeat 2 26 0 1793 147 6 35 chr5 12063838 12064150 -191021382 + AluJb SINE Alu 1 303 -9 26 30 0 0 chr5 12064215 12064248 -191021284 + AT_rich Low_complexity Low_complexity 1 33 0 2198 110 0 26 chr5 12064540 12064849 -191020683 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 12066136 12066228 -191019304 - MLT1B LTR MaLR -32 358 264 1246 208 82 38 chr5 12066232 12066598 -191018934 + MLT1B LTR MaLR 6 387 -3 2492 67 0 3 chr5 12067386 12067686 -191017846 + AluY SINE Alu 1 299 -12 183 80 0 0 chr5 12070755 12070780 -191014752 + (A)n Simple_repeat Simple_repeat 1 25 0 240 227 18 118 chr5 12071119 12071229 -191014303 - MIR SINE MIR -7 255 157 800 114 0 64 chr5 12071231 12071371 -191014161 - AluSg/x SINE Alu -1 309 179 180 0 0 0 chr5 12071371 12071391 -191014141 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 227 323 43 0 chr5 12071399 12071492 -191014040 - MIR SINE MIR -110 152 56 297 287 33 47 chr5 12071761 12071911 -191013621 + MIR SINE MIR 91 238 -24 1217 241 177 9 chr5 12073458 12073922 -191011610 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 12074406 12074644 -191010888 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 12075598 12075624 -191009908 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2502 76 0 0 chr5 12076502 12076803 -191008729 + AluSc SINE Alu 1 301 -8 2145 126 0 3 chr5 12077123 12077424 -191008108 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 12077521 12077730 -191007802 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 12081323 12081626 -191003906 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 12081626 12082023 -191003509 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 12082044 12082161 -191003371 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 12082810 12083055 -191002477 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 12083055 12083348 -191002184 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 12083348 12083839 -191001693 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 12083835 12084180 -191001352 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 12084180 12084201 -191001331 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 12084201 12084772 -191000760 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 12084874 12084901 -191000631 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 12085039 12085142 -191000390 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 12085298 12085385 -191000147 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 12085396 12085445 -191000087 + (TA)n Simple_repeat Simple_repeat 2 48 0 776 230 95 24 chr5 12085602 12085971 -190999561 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 12085976 12086017 -190999515 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 12086017 12086464 -190999068 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 12086464 12086548 -190998984 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1963 193 32 17 chr5 12086765 12087175 -190998357 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 12087191 12087252 -190998280 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 12087286 12087310 -190998222 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 12087327 12087423 -190998109 + L1MC4 LINE L1 6614 6703 -1339 180 0 0 0 chr5 12087427 12087447 -190998085 + (GA)n Simple_repeat Simple_repeat 2 21 0 245 139 93 0 chr5 12087465 12087508 -190998024 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 12088687 12088804 -190996728 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 12088886 12089094 -190996438 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 12091310 12092279 -190993253 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 12092866 12093381 -190992151 - MLT2B1 LTR ERVL 0 520 1 929 245 54 51 chr5 12093915 12094246 -190991286 - MLT1E LTR MaLR -199 394 63 373 66 33 0 chr5 12094920 12094981 -190990551 + (TG)n Simple_repeat Simple_repeat 2 64 0 1713 226 6 43 chr5 12096387 12096801 -190988731 - L1ME1 LINE L1 -168 6067 5672 2178 82 43 0 chr5 12096801 12097080 -190988452 - AluY SINE Alu -5 306 16 1713 226 6 43 chr5 12097080 12097148 -190988384 - L1ME1 LINE L1 -563 5672 5603 1032 274 84 37 chr5 12097156 12097754 -190987778 - L1ME1 LINE L1 -2054 4161 3536 875 150 4 177 chr5 12098027 12098269 -190987263 + MER51C LTR ERV1 446 640 0 421 287 15 7 chr5 12098272 12098408 -190987124 - L1ME1 LINE L1 -2681 3534 3398 3902 185 62 6 chr5 12098412 12099218 -190986314 - L1MB2 LINE L1 -5 6166 5316 3328 262 56 30 chr5 12099210 12101960 -190983572 - L1ME1 LINE L1 -2797 3418 639 * 458 277 196 5 chr5 12101967 12102151 -190983381 + MER20 DNA MER1_type 1 219 0 1402 297 41 17 chr5 12102154 12102743 -190982789 - L1ME1 LINE L1 -5760 636 34 27 62 0 0 chr5 12103015 12103063 -190982469 + AT_rich Low_complexity Low_complexity 1 48 0 597 140 13 33 chr5 12104363 12104513 -190981019 + CT-rich Low_complexity Low_complexity 2 148 0 22 0 0 0 chr5 12105230 12105252 -190980280 + AT_rich Low_complexity Low_complexity 1 22 0 2290 131 41 16 chr5 12105558 12105924 -190979608 + THE1C LTR MaLR 1 375 0 7963 159 40 33 chr5 12105924 12107494 -190978038 + THE1C-int LTR MaLR 1 1580 0 2214 138 42 8 chr5 12107496 12107857 -190977675 + THE1C LTR MaLR 3 375 0 1131 225 14 0 chr5 12108117 12108339 -190977193 + AluJb SINE Alu 5 229 -83 1110 238 47 0 chr5 12109367 12109644 -190975888 - MER58B DNA MER1_type -6 335 46 395 303 117 7 chr5 12111810 12112091 -190973441 + MLT1J2 LTR MaLR 18 329 -121 277 300 0 0 chr5 12113080 12113160 -190972372 + (TG)n Simple_repeat Simple_repeat 2 81 0 1647 110 44 0 chr5 12114082 12114309 -190971223 - AluSg/x SINE Alu -4 306 70 644 211 172 16 chr5 12115922 12116178 -190969354 - MER69 DNA AcHobo -94 2432 2137 995 271 83 95 chr5 12116248 12116583 -190968949 - MER69B DNA AcHobo -1609 917 580 244 150 0 67 chr5 12116583 12116643 -190968889 + LTR66 LTR ERVL 384 439 -171 333 68 0 0 chr5 12116643 12116687 -190968845 + (TG)n Simple_repeat Simple_repeat 2 45 0 995 271 83 95 chr5 12116687 12116698 -190968834 - MER69B DNA AcHobo -1945 581 571 2242 109 0 10 chr5 12116698 12117001 -190968531 - AluSq SINE Alu -13 300 1 995 271 83 95 chr5 12117001 12117406 -190968126 - MER69B DNA AcHobo -1955 571 72 2479 67 0 7 chr5 12117889 12118189 -190967343 - AluY SINE Alu -13 298 1 2225 121 0 13 chr5 12118196 12118511 -190967021 - AluSq SINE Alu -1 312 2 22 0 0 0 chr5 12118687 12118709 -190966823 + AT_rich Low_complexity Low_complexity 1 22 0 223 249 73 0 chr5 12120044 12120136 -190965396 + MER5A DNA MER1_type 63 152 -26 261 0 0 0 chr5 12120208 12120237 -190965295 + (A)n Simple_repeat Simple_repeat 1 29 0 378 245 23 35 chr5 12121092 12121233 -190964299 + MIR SINE MIR 45 184 -63 2212 167 53 17 chr5 12121294 12121678 -190963854 - MSTA LTR MaLR 0 428 27 2955 63 115 5 chr5 12121678 12122037 -190963495 + MLT2A1 LTR ERVL 2 411 -33 905 90 0 8 chr5 12122037 12122171 -190963361 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2955 63 115 5 chr5 12122171 12122210 -190963322 + MLT2A1 LTR ERVL 411 444 0 2212 167 53 17 chr5 12122210 12122238 -190963294 - MSTA LTR MaLR -401 27 1 37743 93 13 7 chr5 12123514 12129668 -190955864 + L1PA6 LINE L1 11 6154 0 35 24 0 0 chr5 12129910 12129952 -190955580 + AT_rich Low_complexity Low_complexity 1 42 0 312 27 0 0 chr5 12130247 12130284 -190955248 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 193 0 0 chr5 12130921 12130978 -190954554 + (CA)n Simple_repeat Simple_repeat 2 58 0 1520 257 38 16 chr5 12134676 12135127 -190950405 - LTR53 LTR ERVL -7 512 52 547 270 37 18 chr5 12135667 12135830 -190949702 + MIR SINE MIR 60 225 -37 775 267 115 33 chr5 12135871 12136298 -190949234 + MLT1C LTR MaLR 1 462 -5 191 214 0 71 chr5 12136400 12136456 -190949076 - L2 LINE L2 -5 3267 3216 229 189 0 0 chr5 12137410 12137447 -190948085 + MER81 DNA DNA 1 37 -77 238 301 0 0 chr5 12140384 12140457 -190945075 - MIR SINE MIR -129 133 61 2469 146 34 2 chr5 12141460 12141871 -190943661 + MSTA LTR MaLR 1 424 -4 650 242 159 5 chr5 12142119 12142533 -190942999 + MLT1G1 LTR MaLR 30 541 -49 1386 207 34 14 chr5 12143130 12143425 -190942107 + AluJb SINE Alu 1 301 -1 696 276 148 6 chr5 12145922 12146259 -190939273 - L1MC4 LINE L1 -151 7891 7507 2080 140 21 32 chr5 12146364 12146743 -190938789 - THE1C LTR MaLR 0 375 1 1527 196 145 0 chr5 12148224 12148576 -190936956 - MER57A LTR ERV1 0 403 1 320 44 0 0 chr5 12148614 12148659 -190936873 + AluSp/q SINE Alu 255 299 -4 519 219 0 47 chr5 12150558 12150686 -190934846 + MLT1A1 LTR MaLR 1 122 -243 1234 202 34 15 chr5 12151004 12151266 -190934266 + MLT1A1 LTR MaLR 99 365 0 5405 130 13 7 chr5 12151585 12152563 -190932969 - L1PA14 LINE L1 -66 6095 5112 1801 140 184 11 chr5 12152729 12153094 -190932438 + MSTA LTR MaLR 1 428 0 993 114 0 0 chr5 12153116 12153256 -190932276 + MSTA-int LTR MaLR 59 198 -1382 238 269 0 0 chr5 12153256 12153308 -190932224 + (TG)n Simple_repeat Simple_repeat 2 53 0 2488 159 33 28 chr5 12153608 12154067 -190931465 - MLT1C LTR MaLR -1 466 6 326 89 78 0 chr5 12154189 12154279 -190931253 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 2356 106 0 6 chr5 12155560 12155872 -190929660 - AluSp SINE Alu -2 311 2 249 287 53 0 chr5 12156546 12156640 -190928892 + MIR SINE MIR 132 230 -32 21 95 0 0 chr5 12157359 12157422 -190928110 + AT_rich Low_complexity Low_complexity 1 63 0 240 291 57 70 chr5 12157436 12157543 -190927989 - L1P LINE L1 -2364 3782 3676 288 0 0 0 chr5 12157543 12157575 -190927957 + (TG)n Simple_repeat Simple_repeat 2 33 0 240 291 57 70 chr5 12157575 12157625 -190927907 - L1P LINE L1 -2470 3676 3627 22 0 0 0 chr5 12161132 12161154 -190924378 + AT_rich Low_complexity Low_complexity 1 22 0 874 268 27 27 chr5 12162736 12163035 -190922497 + L1MD2 LINE L1 4398 4696 -1450 * 2760 240 67 62 chr5 12163030 12163972 -190921560 + L1MD2 LINE L1 5056 6042 -317 1806 158 45 24 chr5 12163972 12164302 -190921230 + MER1B DNA MER1_type 1 337 0 2760 240 67 62 chr5 12164302 12164612 -190920920 + L1MD2 LINE L1 6042 6349 -10 392 254 46 23 chr5 12164764 12164894 -190920638 + HAL1b LINE L1 681 813 -535 5020 224 44 12 chr5 12165059 12165995 -190919537 - L1 LINE L1 -951 5195 4290 258 105 0 0 chr5 12165995 12166033 -190919499 + (TG)n Simple_repeat Simple_repeat 1 38 0 5020 224 44 12 chr5 12166033 12166113 -190919419 - L1 LINE L1 -1856 4290 4214 258 32 0 0 chr5 12166113 12166144 -190919388 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5020 224 44 12 chr5 12166144 12166499 -190919033 - L1 LINE L1 -1932 4214 3779 2365 189 37 18 chr5 12166501 12167120 -190918412 + L1MA9 LINE L1 5207 5840 -472 2049 161 9 0 chr5 12167270 12167618 -190917914 + L1PA16 LINE L1 5811 6161 -5 387 145 0 0 chr5 12167899 12167968 -190917564 + (CAT)n Simple_repeat Simple_repeat 2 70 0 180 286 202 0 chr5 12168485 12168604 -190916928 + L2 LINE L2 3102 3244 -69 2147 116 7 7 chr5 12170316 12170619 -190914913 - AluSx SINE Alu -8 304 2 328 224 152 8 chr5 12170899 12171024 -190914508 + Charlie7 DNA MER1_type 49 191 -2421 508 237 16 37 chr5 12171324 12171514 -190914018 + Charlie7 DNA MER1_type 581 766 -1846 1540 271 73 54 chr5 12172019 12173131 -190912401 + Charlie7 DNA MER1_type 1312 2444 -168 21 0 0 0 chr5 12173426 12173447 -190912085 + AT_rich Low_complexity Low_complexity 1 21 0 221 226 15 73 chr5 12173976 12174113 -190911419 + T-rich Low_complexity Low_complexity 2 130 0 216 0 0 0 chr5 12175161 12175185 -190910347 + (TG)n Simple_repeat Simple_repeat 1 24 0 375 243 43 64 chr5 12175244 12175384 -190910148 - MIR SINE MIR -109 153 17 790 163 7 14 chr5 12176199 12176340 -190909192 - FLAM_A SINE Alu -2 140 1 2010 112 0 0 chr5 12176788 12177074 -190908458 + AluSq SINE Alu 26 311 0 2135 217 84 42 chr5 12177074 12177982 -190907550 - L1MEc LINE L1 -2939 3276 2331 256 274 126 0 chr5 12178008 12178198 -190907334 - L1MEc LINE L1 -4094 2302 2089 1221 112 96 0 chr5 12178962 12179150 -190906382 - LTR12 LTR ERV1 -132 582 377 367 213 11 0 chr5 12179151 12179245 -190906287 - LTR30 LTR ERV1 -80 642 548 6114 96 43 61 chr5 12179245 12180419 -190905113 - pTR5 LTR ERV1 -409 2029 741 609 277 104 38 chr5 12181022 12181581 -190903951 + L1ME LINE L1 4885 5333 -813 340 264 47 0 chr5 12181594 12181700 -190903832 + L1ME LINE L1 5543 5653 -468 593 304 104 36 chr5 12182892 12183363 -190902169 - MLT1K LTR MaLR -6 582 80 24 32 0 0 chr5 12183667 12183698 -190901834 + AT_rich Low_complexity Low_complexity 1 31 0 391 184 10 10 chr5 12185627 12185725 -190899807 + CT-rich Low_complexity Low_complexity 4 101 0 237 266 0 0 chr5 12187087 12187181 -190898351 + (CA)n Simple_repeat Simple_repeat 2 95 0 234 191 0 0 chr5 12187519 12187566 -190897966 + GA-rich Low_complexity Low_complexity 3 49 0 349 324 55 14 chr5 12187578 12187723 -190897809 + MIR SINE MIR 3 153 -109 21 0 0 0 chr5 12190213 12190234 -190895298 + AT_rich Low_complexity Low_complexity 1 21 0 2325 250 42 44 chr5 12191328 12192680 -190892852 + L1MB8 LINE L1 914 2258 -4701 829 259 48 48 chr5 12192718 12193027 -190892505 - MLT1C LTR MaLR -3 464 156 2141 264 75 48 chr5 12193035 12193813 -190891719 + L1MB8 LINE L1 3556 4312 -2645 264 59 0 0 chr5 12193813 12193847 -190891685 + (CA)n Simple_repeat Simple_repeat 1 34 0 576 106 0 141 chr5 12193853 12193995 -190891537 + L1MA8 LINE L1 6169 6290 -1 2141 264 75 48 chr5 12193995 12194502 -190891030 + L1MB8 LINE L1 4316 4883 -2074 4040 212 37 25 chr5 12194526 12196076 -190889456 - L1MB3 LINE L1 -12 6171 4597 1077 264 30 15 chr5 12196080 12196474 -190889058 + L1MB8 LINE L1 4875 5274 -1683 * 2319 223 25 28 chr5 12196469 12196683 -190888849 + L1MB8 LINE L1 5689 5902 -1087 2398 75 0 0 chr5 12196683 12196976 -190888556 + AluY SINE Alu 1 293 -18 2319 223 25 28 chr5 12196976 12197895 -190887637 + L1MB8 LINE L1 5902 6989 0 265 314 88 10 chr5 12199932 12200034 -190885498 + L2 LINE L2 2872 2981 -332 23 0 0 0 chr5 12200406 12200429 -190885103 + AT_rich Low_complexity Low_complexity 1 23 0 247 323 39 23 chr5 12200788 12200918 -190884614 - L2 LINE L2 0 3272 3141 4179 118 53 16 chr5 12202129 12202824 -190882708 + L1PA13 LINE L1 5443 6163 0 1678 189 123 3 chr5 12203195 12203384 -190882148 - MSTA LTR MaLR 0 428 263 309 26 0 0 chr5 12203384 12203422 -190882110 + (GA)n Simple_repeat Simple_repeat 2 39 0 1678 189 123 3 chr5 12203422 12203614 -190881918 - MSTA LTR MaLR -165 263 1 2227 226 107 16 chr5 12203661 12204648 -190880884 + L1MC/D LINE L1 4362 5446 -743 4146 109 10 0 chr5 12204695 12205312 -190880220 - L1P LINE L1 -2329 3817 3195 6566 85 1 3 chr5 12205315 12206294 -190879238 + L1PA8 LINE L1 5179 6155 -17 582 114 0 0 chr5 12206297 12206385 -190879147 + (TA)n Simple_repeat Simple_repeat 1 88 0 32 86 0 0 chr5 12207538 12207619 -190877913 + AT_rich Low_complexity Low_complexity 1 81 0 26 50 0 0 chr5 12207960 12208000 -190877532 + AT_rich Low_complexity Low_complexity 1 40 0 284 367 36 22 chr5 12208231 12208509 -190877023 + L1MEc LINE L1 34 315 -6081 23 33 0 0 chr5 12209145 12209175 -190876357 + AT_rich Low_complexity Low_complexity 1 30 0 532 286 93 35 chr5 12209192 12209786 -190875746 + L1MEc LINE L1 1039 1666 -4730 27 0 0 0 chr5 12210217 12210244 -190875288 + AT_rich Low_complexity Low_complexity 1 27 0 357 134 12 24 chr5 12210925 12211007 -190874525 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 192 152 0 0 chr5 12211053 12211086 -190874446 + GA-rich Low_complexity Low_complexity 3 35 0 2270 60 0 0 chr5 12211517 12211798 -190873734 - L1PA7 LINE L1 -8 6146 5866 227 203 17 0 chr5 12214601 12214660 -190870872 + CT-rich Low_complexity Low_complexity 1 60 0 328 298 89 0 chr5 12214954 12215078 -190870454 - L2 LINE L2 0 3313 3179 186 375 0 0 chr5 12215617 12215681 -190869851 - L2 LINE L2 -298 2974 2911 2075 137 42 28 chr5 12216038 12216397 -190869135 - THE1B LTR MaLR 0 364 1 430 374 40 34 chr5 12216673 12216994 -190868538 + L2 LINE L2 2325 2647 -667 1135 36 0 0 chr5 12217351 12217488 -190868044 - L1PA5 LINE L1 0 6154 6018 215 226 170 0 chr5 12217740 12217793 -190867739 + L2 LINE L2 3186 3247 -25 712 256 103 38 chr5 12218166 12218564 -190866968 + MER45B DNA AcHobo 3 424 -616 * 974 217 46 11 chr5 12218563 12218844 -190866688 + MER45R DNA AcHobo 1291 1581 0 1442 184 7 47 chr5 12218929 12219228 -190866304 + AluJb SINE Alu 1 287 -25 292 324 89 11 chr5 12220472 12220651 -190864881 + HAL1b LINE L1 247 439 -909 434 288 70 77 chr5 12220761 12221179 -190864353 - MLT1J LTR MaLR -10 501 6 440 327 101 19 chr5 12222081 12222677 -190862855 + L1M4 LINE L1 4193 4837 -1309 254 252 86 7 chr5 12223080 12223219 -190862313 + L1ME LINE L1 4366 4515 -1631 236 269 2 30 chr5 12223214 12223320 -190862212 + L1ME LINE L1 5318 5420 -701 * 526 266 27 73 chr5 12223347 12223536 -190861996 + L1ME LINE L1 5508 5648 -522 2167 116 3 0 chr5 12223536 12223839 -190861693 - AluSx SINE Alu -6 306 3 526 266 27 73 chr5 12223839 12223883 -190861649 + L1ME LINE L1 5648 5692 -478 754 285 64 13 chr5 12224047 12224440 -190861092 - L1M4 LINE L1 -1556 4590 4178 368 298 81 44 chr5 12224449 12224699 -190860833 - L1MEd LINE L1 -4688 1622 1383 2332 66 0 3 chr5 12224699 12224986 -190860546 - AluY SINE Alu -5 306 21 368 298 81 44 chr5 12224986 12225589 -190859943 - L1MEd LINE L1 -4927 1383 708 5374 238 61 51 chr5 12225905 12229289 -190856243 - L1MC2 LINE L1 -12 6612 3195 3026 147 18 110 chr5 12229299 12230043 -190855489 - L1MA7 LINE L1 -22 6269 5595 253 190 0 0 chr5 12230062 12230120 -190855412 - L1MC2 LINE L1 -3234 3192 3135 4093 49 8 0 chr5 12230317 12230831 -190854701 - L1PA5 LINE L1 -1 6153 5636 1071 269 60 8 chr5 12230836 12231590 -190853942 - L1MC2 LINE L1 -4390 2217 1230 783 337 52 30 chr5 12231889 12232447 -190853085 - ERVL LTR ERVL -1053 4640 4032 2108 145 34 8 chr5 12232504 12232855 -190852677 + THE1C LTR MaLR 1 360 -15 1877 159 26 34 chr5 12232984 12233362 -190852170 + THE1C LTR MaLR 1 375 0 251 277 30 0 chr5 12233546 12233647 -190851885 - ERVL LTR ERVL -1731 3265 3162 6391 96 8 4 chr5 12233952 12234909 -190850623 + L1PA10 LINE L1 5200 6159 -9 1106 171 0 0 chr5 12234909 12235090 -190850442 + AluJb SINE Alu 129 309 -3 21 0 0 0 chr5 12236304 12236325 -190849207 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 12237192 12237222 -190848310 + AT_rich Low_complexity Low_complexity 1 30 0 2305 127 50 21 chr5 12237815 12238029 -190847503 - L1PA13 LINE L1 -3 6160 5954 2366 75 0 3 chr5 12238029 12238321 -190847211 - AluY SINE Alu -9 302 12 2305 127 50 21 chr5 12238321 12238530 -190847002 - L1PA13 LINE L1 -209 5954 5725 1992 131 0 42 chr5 12238527 12238809 -190846723 + L1P4 LINE L1 5410 5677 -491 * 2457 65 7 10 chr5 12238809 12239118 -190846414 + AluY SINE Alu 4 311 0 1992 131 0 42 chr5 12239118 12239171 -190846361 + L1P4 LINE L1 5677 5731 -437 23 0 0 0 chr5 12242100 12242123 -190843409 + AT_rich Low_complexity Low_complexity 1 23 0 2780 13 0 0 chr5 12242338 12242641 -190842891 + AluYa5 SINE Alu 1 303 -8 498 212 10 0 chr5 12244225 12244324 -190841208 - MER94 DNA DNA -33 101 2 261 83 0 0 chr5 12245130 12245166 -190840366 + (T)n Simple_repeat Simple_repeat 1 36 0 390 271 100 29 chr5 12245173 12245343 -190840189 + L1ME1 LINE L1 5911 6092 -74 7608 27 0 70 chr5 12245365 12246470 -190839062 - L1PA3 LINE L1 -3 6152 5073 2484 129 6 3 chr5 12246917 12247280 -190838252 - THE1B LTR MaLR 0 364 1 1147 230 34 73 chr5 12249029 12249412 -190836120 - MLT1A2 LTR MaLR -6 368 1 536 217 70 0 chr5 12250069 12250198 -190835334 + L1MC3 LINE L1 36 173 -6223 * 1033 154 0 6 chr5 12250197 12250372 -190835160 - L1P LINE L1 -1387 4759 4586 196 214 0 24 chr5 12250372 12250414 -190835118 + MER5A DNA MER1_type 148 188 -1 1266 168 39 0 chr5 12250434 12250666 -190834866 + L1MB3 LINE L1 5664 5904 -279 1889 141 14 4 chr5 12250669 12250946 -190834586 + AluSq SINE Alu 1 280 -33 414 0 0 0 chr5 12250946 12250992 -190834540 + (CA)n Simple_repeat Simple_repeat 1 46 0 524 300 22 11 chr5 12250992 12251172 -190834360 + L1MC3 LINE L1 160 341 -6055 850 246 97 8 chr5 12251300 12251548 -190833984 + MER57A LTR ERV1 132 401 -2 893 224 110 24 chr5 12252599 12252982 -190832550 + MER57-int LTR ERV1 1040 1455 -3481 6520 31 4 0 chr5 12253036 12253806 -190831726 - L1PA4 LINE L1 0 6155 5383 4428 28 4 0 chr5 12253802 12254344 -190831188 - L1PA4 LINE L1 -2505 3641 3098 * 234 0 0 0 chr5 12254480 12254506 -190831026 + (TA)n Simple_repeat Simple_repeat 2 27 0 602 208 26 106 chr5 12254664 12254826 -190830706 + MER57-int LTR ERV1 2331 2504 -2619 1853 168 0 0 chr5 12254826 12255100 -190830432 + AluSx SINE Alu 11 284 -28 378 0 0 0 chr5 12255104 12255146 -190830386 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 602 208 26 106 chr5 12255146 12255242 -190830290 + MER57-int LTR ERV1 2507 2573 -2550 404 266 37 27 chr5 12255214 12255402 -190830130 + MER57-int LTR ERV1 2457 2646 -2290 * 1077 198 20 41 chr5 12255477 12255785 -190829747 + MER57-int LTR ERV1 3339 5488 -1498 390 196 33 22 chr5 12255785 12255877 -190829655 + Alu SINE Alu 202 294 -7 1053 236 14 82 chr5 12256535 12256939 -190828593 + MER57-int LTR ERV1 5830 6387 -1357 986 339 37 55 chr5 12257411 12257681 -190827851 + MER57-int LTR ERV1 6232 6505 -1032 2137 112 3 7 chr5 12257681 12257977 -190827555 + AluSg SINE Alu 1 295 -15 986 339 37 55 chr5 12257977 12258642 -190826890 + MER57-int LTR ERV1 6505 7151 -386 717 268 80 23 chr5 12258691 12259045 -190826487 + MER57A LTR ERV1 69 389 -14 792 281 79 76 chr5 12259083 12259664 -190825868 + L1MC3 LINE L1 360 942 -5454 939 259 128 34 chr5 12259691 12260073 -190825459 + L1MCb LINE L1 12 429 -5616 1368 286 65 19 chr5 12260159 12261146 -190824386 + L1MCb LINE L1 2732 3763 -2801 2174 279 63 21 chr5 12261391 12262556 -190822976 + L1MC3 LINE L1 2383 3596 -2619 872 299 63 0 chr5 12262569 12262933 -190822599 + L1MC3 LINE L1 3797 4183 -2032 198 50 75 0 chr5 12262933 12262973 -190822559 + (TA)n Simple_repeat Simple_repeat 1 43 0 275 130 65 11 chr5 12263006 12263098 -190822434 + (TA)n Simple_repeat Simple_repeat 1 97 0 5452 227 65 16 chr5 12263100 12263738 -190821794 + L1MC3 LINE L1 4876 5481 -734 201 74 0 0 chr5 12263738 12263765 -190821767 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 5452 227 65 16 chr5 12263765 12264643 -190820889 + L1MC3 LINE L1 5481 5091 -1124 282 116 0 0 chr5 12264643 12264686 -190820846 + (CA)n Simple_repeat Simple_repeat 2 44 0 5452 227 65 16 chr5 12264686 12265089 -190820443 + L1MC3 LINE L1 5090 5472 -743 1461 221 98 51 chr5 12265090 12265557 -190819975 - MLT1D LTR MaLR 0 505 17 198 71 0 0 chr5 12265568 12265596 -190819936 + (CA)n Simple_repeat Simple_repeat 2 29 0 263 143 0 100 chr5 12265602 12265672 -190819860 + L1MC3 LINE L1 6946 7008 -846 282 106 21 0 chr5 12265695 12265742 -190819790 - L1MA9 LINE L1 -1 6311 6264 568 207 67 0 chr5 12265745 12265895 -190819637 + L1MC3 LINE L1 7014 7173 -681 1168 237 20 4 chr5 12265925 12266366 -190819166 + L1MC3 LINE L1 7274 7807 -47 697 280 45 48 chr5 12266395 12266978 -190818554 + L1MEc LINE L1 1000 1580 -4816 2586 99 8 0 chr5 12267032 12267384 -190818148 + THE1A LTR MaLR 1 355 0 11241 100 12 2 chr5 12267384 12267863 -190817669 + THE1A-int LTR MaLR 1 474 -1106 225 0 0 0 chr5 12267863 12267888 -190817644 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 11241 100 12 2 chr5 12267888 12268972 -190816560 + THE1A-int LTR MaLR 474 1580 0 2479 85 9 0 chr5 12268972 12269300 -190816232 + THE1A LTR MaLR 1 331 -24 840 105 0 0 chr5 12269341 12269455 -190816077 + THE1A LTR MaLR 1 114 -241 1450 245 64 52 chr5 12269507 12270173 -190815359 + L1MEc LINE L1 1670 2326 -3889 424 126 10 39 chr5 12270173 12270276 -190815256 + L1MA9 LINE L1 6202 6301 -11 1450 245 64 52 chr5 12270276 12270344 -190815188 + L1MEc LINE L1 2326 2392 -3823 2075 100 60 0 chr5 12270344 12270625 -190814907 - AluSq SINE Alu -15 298 1 1450 245 64 52 chr5 12270625 12270796 -190814736 + L1MEc LINE L1 2392 2549 -3666 1416 130 5 0 chr5 12271397 12271597 -190813935 - AluSp SINE Alu -5 308 108 1857 283 49 33 chr5 12271713 12272720 -190812812 + L1MEc LINE L1 3391 4413 -1802 1171 202 27 12 chr5 12272738 12272995 -190812537 + MLT1B LTR MaLR 130 390 0 591 263 38 19 chr5 12273042 12273308 -190812224 + L1MEc LINE L1 5027 5297 -918 40 37 0 0 chr5 12273360 12273414 -190812118 + AT_rich Low_complexity Low_complexity 1 54 0 8861 192 56 20 chr5 12273468 12276098 -190809434 + L1M1 LINE L1 2920 5658 -642 2024 142 3 6 chr5 12276146 12276497 -190809035 - AluSq SINE Alu 0 350 1 235 180 0 0 chr5 12276515 12276565 -190808967 + L1MA10 LINE L1 6282 6331 -3 4056 158 20 4 chr5 12277313 12278020 -190807512 - L1PA16 LINE L1 -5 6161 5444 237 196 0 0 chr5 12279225 12279276 -190806256 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2475 64 0 0 chr5 12279864 12280160 -190805372 + AluY SINE Alu 1 296 -15 1330 248 85 25 chr5 12280675 12281110 -190804422 + MLT1F LTR MaLR 82 542 0 184 328 0 16 chr5 12285781 12285842 -190799690 + MIR SINE MIR 74 133 -75 1492 228 35 68 chr5 12286881 12287292 -190798240 + MLT1C LTR MaLR 1 395 -72 543 190 112 9 chr5 12287292 12287408 -190798124 - FLAM_A SINE Alu -1 132 5 1492 228 35 68 chr5 12287408 12287479 -190798053 + MLT1C LTR MaLR 395 467 0 1571 168 31 25 chr5 12287494 12287862 -190797670 - Charlie3 DNA MER1_type 0 2712 1 256 295 93 23 chr5 12288386 12288515 -190797017 + MIR SINE MIR 108 245 -17 194 284 181 8 chr5 12288662 12288789 -190796743 - MIR SINE MIR -11 251 103 242 267 56 11 chr5 12289637 12289727 -190795805 - MIR SINE MIR -103 159 66 1233 212 41 132 chr5 12289730 12290418 -190795114 + L1MC3 LINE L1 6675 7299 -486 929 252 56 51 chr5 12290431 12290859 -190794673 - MLT1C LTR MaLR -14 453 24 1828 184 123 2 chr5 12290886 12291315 -190794217 + L1MC3 LINE L1 7296 7776 -9 186 133 0 0 chr5 12292224 12292254 -190793278 + (TG)n Simple_repeat Simple_repeat 2 31 0 223 402 0 0 chr5 12293757 12293849 -190791683 - MIR SINE MIR -72 190 99 2529 127 6 0 chr5 12297336 12297698 -190787834 + THE1B LTR MaLR 1 364 0 1024 295 54 28 chr5 12297744 12298243 -190787289 - L2 LINE L2 -646 2668 2157 196 397 13 0 chr5 12298636 12298714 -190786818 + MIR SINE MIR 20 98 -164 2064 189 25 7 chr5 12300007 12300451 -190785081 + MER66A LTR ERV1 27 478 0 195 42 0 0 chr5 12302924 12302948 -190782584 + (TTA)n Simple_repeat Simple_repeat 2 25 0 14889 101 8 5 chr5 12302952 12305955 -190779577 - L1PA7 LINE L1 -13 6141 3129 698 107 9 0 chr5 12305955 12306067 -190779465 + L1P LINE L1 4649 4761 -1385 13537 142 26 110 chr5 12306100 12309541 -190775991 - L1PA7 LINE L1 -2994 3152 1 5941 116 19 2 chr5 12359646 12360527 -190725005 - THE1A-int LTR MaLR -684 896 1 2155 130 11 26 chr5 12360527 12360874 -190724658 - THE1A LTR MaLR 0 355 14 1343 185 181 0 chr5 12361048 12361155 -190724377 + AluSx SINE Alu 3 89 -213 396 0 0 0 chr5 12361155 12361199 -190724333 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1343 185 181 0 chr5 12361199 12361345 -190724187 + AluSx SINE Alu 89 302 0 1907 208 75 23 chr5 12361587 12362067 -190723465 - MLT1D LTR MaLR 0 505 1 318 329 106 29 chr5 12362232 12362582 -190722950 - L2 LINE L2 -341 2973 2597 1424 186 0 40 chr5 12362996 12363297 -190722235 + L1MA9 LINE L1 6024 6312 0 280 208 0 0 chr5 12366430 12366483 -190719049 - MIR SINE MIR -32 230 178 406 288 28 79 chr5 12368509 12368724 -190716808 - MIR SINE MIR -56 206 3 203 133 0 0 chr5 12369377 12369407 -190716125 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 14783 21 0 0 chr5 12369721 12372628 -190712904 + L1PA2 LINE L1 3244 6153 -2 1611 199 80 0 chr5 12372630 12372992 -190712540 + L1MD3 LINE L1 7432 7822 -173 3471 214 58 22 chr5 12372998 12373928 -190711604 + L1MB2 LINE L1 5174 6139 -32 1971 155 0 0 chr5 12373950 12374275 -190711257 - AluSx SINE Alu 0 325 1 308 337 58 5 chr5 12374275 12374480 -190711052 + L1MC4a LINE L1 5843 6058 -1750 21 104 0 0 chr5 12374543 12374620 -190710912 + AT_rich Low_complexity Low_complexity 1 77 0 418 351 145 22 chr5 12374648 12375104 -190710428 - L2 LINE L2 -2352 962 451 1258 254 85 7 chr5 12375338 12375795 -190709737 - MLT2B2 LTR ERVL -20 495 3 418 330 112 31 chr5 12375816 12376174 -190709358 - L2 LINE L2 -2697 617 231 24539 41 43 2 chr5 12377310 12380335 -190705197 - L1P LINE L1 -2997 3149 1 2350 233 66 13 chr5 12380331 12381031 -190704501 - L1 LINE L1 -947 5199 4463 * 341 230 63 40 chr5 12381083 12381209 -190704323 - L1MC/D LINE L1 -2066 5742 5614 1208 71 7 7 chr5 12381261 12381416 -190704116 - L1PB1 LINE L1 -1 6150 5996 406 324 134 44 chr5 12381504 12382250 -190703282 - L1MC/D LINE L1 -946 5200 4377 387 329 41 21 chr5 12382517 12382857 -190702675 + L1M4 LINE L1 3715 4061 -2085 4090 260 64 30 chr5 12384315 12384859 -190700673 - L1M4 LINE L1 -1471 4675 4151 1305 260 109 60 chr5 12384859 12385456 -190700076 + MLT1E2 LTR MaLR 1 626 0 4090 260 64 30 chr5 12385456 12386764 -190698768 - L1M4 LINE L1 -1995 4151 2760 206 347 0 0 chr5 12388021 12388096 -190697436 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 209 30 61 0 chr5 12389133 12389166 -190696366 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 306 0 0 0 chr5 12394278 12394312 -190691220 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 216 198 45 chr5 12394363 12394474 -190691058 - MIR SINE MIR -71 191 64 350 306 32 8 chr5 12394488 12394612 -190690920 + MIR SINE MIR 13 139 -123 186 191 0 0 chr5 12394763 12394805 -190690727 + CT-rich Low_complexity Low_complexity 2 43 0 401 145 13 0 chr5 12394841 12394917 -190690615 + CT-rich Low_complexity Low_complexity 3 79 0 186 133 0 0 chr5 12395094 12395124 -190690408 + (T)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 12396035 12396057 -190689475 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 12399473 12399494 -190686038 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 12399865 12399914 -190685618 + AT_rich Low_complexity Low_complexity 1 49 0 1292 177 0 57 chr5 12400067 12400315 -190685217 + AluSq SINE Alu 1 234 -79 254 299 52 31 chr5 12400557 12400654 -190684878 - L2 LINE L2 -15 3298 3200 275 244 13 13 chr5 12400918 12400996 -190684536 + MIR SINE MIR 156 233 -29 304 262 52 95 chr5 12401100 12401405 -190684127 - L2 LINE L2 -640 2674 2383 239 291 145 37 chr5 12402367 12402663 -190682869 - MLT1J1 LTR MaLR -41 405 78 22 35 0 0 chr5 12403563 12403592 -190681940 + AT_rich Low_complexity Low_complexity 1 29 0 2315 105 3 0 chr5 12403714 12404010 -190681522 + AluSp SINE Alu 1 297 -16 320 298 65 48 chr5 12404103 12404503 -190681029 + L1M4 LINE L1 4513 4919 -1227 2920 91 3 0 chr5 12404593 12404956 -190680576 + THE1B LTR MaLR 1 364 0 270 212 9 88 chr5 12405315 12405428 -190680104 + L1M LINE L1 5326 5429 -2379 197 265 59 15 chr5 12405494 12405562 -190679970 - L2 LINE L2 0 3313 3243 24 77 0 0 chr5 12405849 12405901 -190679631 + AT_rich Low_complexity Low_complexity 1 52 0 24 67 0 0 chr5 12407489 12407534 -190677998 + AT_rich Low_complexity Low_complexity 1 45 0 23 68 0 0 chr5 12408507 12408551 -190676981 + AT_rich Low_complexity Low_complexity 1 44 0 203 0 37 0 chr5 12409649 12409676 -190675856 + (TG)n Simple_repeat Simple_repeat 1 28 0 2143 159 85 10 chr5 12412492 12412882 -190672650 - MSTA LTR MaLR 0 428 10 1900 195 34 6 chr5 12413034 12413383 -190672149 + MLT1A1 LTR MaLR 7 365 0 1158 233 131 23 chr5 12413483 12413889 -190671643 + MLT1C LTR MaLR 1 446 -11 967 318 23 8 chr5 12413898 12414250 -190671282 + ERVL LTR ERVL 830 1186 -3810 866 259 63 22 chr5 12414607 12414924 -190670608 + ERVL LTR ERVL 1675 2004 -2992 446 291 58 39 chr5 12414953 12415159 -190670373 + LTR1B LTR ERV1 39 248 -578 570 249 65 6 chr5 12415198 12415367 -190670165 + LTR28 LTR ERV1 396 574 -446 229 242 20 141 chr5 12415379 12415528 -190670004 + LTR28 LTR ERV1 848 978 -42 1187 345 28 13 chr5 12415574 12416177 -190669355 + ERVL LTR ERVL 2029 2640 -3014 420 365 14 0 chr5 12416225 12416370 -190669162 + ERVL LTR ERVL 2713 2859 -2137 323 292 44 9 chr5 12416413 12416526 -190669006 + ERVL LTR ERVL 2937 3053 -1943 290 312 49 28 chr5 12416660 12416907 -190668625 + ERVL LTR ERVL 3288 3539 -2225 569 332 80 44 chr5 12416944 12417921 -190667611 + ERVL LTR ERVL 3275 4610 -1154 273 319 9 0 chr5 12418525 12418641 -190666891 + LTR16A LTR ERVL 256 372 -78 276 284 121 21 chr5 12419193 12419334 -190666198 - MIR SINE MIR -86 176 22 183 415 62 8 chr5 12424596 12424726 -190660806 + L2 LINE L2 3136 3272 0 273 283 33 33 chr5 12424835 12424927 -190660605 + GA-rich Low_complexity Low_complexity 4 95 0 1209 234 62 9 chr5 12425713 12426050 -190659482 + MLT1A1 LTR MaLR 11 365 0 253 333 24 0 chr5 12426509 12426593 -190658939 - L2 LINE L2 -4 3309 3224 352 322 54 20 chr5 12426810 12426959 -190658573 - L2 LINE L2 -250 3063 2910 182 306 85 45 chr5 12427508 12427707 -190657825 - L2 LINE L2 -416 2898 2692 21 0 0 0 chr5 12427783 12427804 -190657728 + AT_rich Low_complexity Low_complexity 1 21 0 4834 177 23 11 chr5 12428570 12429795 -190655737 + L1MA4 LINE L1 5062 6300 0 1524 187 31 48 chr5 12429853 12429937 -190655595 + MER7A DNA MER2_type 2 86 -2952 1917 119 50 11 chr5 12429937 12430214 -190655318 - AluSx SINE Alu -24 288 1 1524 187 31 48 chr5 12430214 12430482 -190655050 + MER7A DNA MER2_type 86 346 0 402 237 30 108 chr5 12430849 12431081 -190654451 - MLT1I LTR MaLR 0 409 196 1759 77 0 104 chr5 12431519 12431846 -190653686 - L1P LINE L1 -921 5225 4933 26 30 0 0 chr5 12434636 12434669 -190650863 + AT_rich Low_complexity Low_complexity 1 33 0 294 266 28 9 chr5 12436335 12436444 -190649088 - L1MC4 LINE L1 -134 7908 7798 269 333 123 49 chr5 12436968 12437211 -190648321 + L2 LINE L2 3053 3313 0 356 360 114 24 chr5 12437646 12438384 -190647148 - L1M4 LINE L1 -2969 3177 2374 202 282 0 0 chr5 12438507 12438578 -190646954 + A-rich Low_complexity Low_complexity 1 71 0 186 143 0 0 chr5 12438610 12438645 -190646887 + (CA)n Simple_repeat Simple_repeat 2 36 0 1502 214 3 28 chr5 12438863 12439180 -190646352 + AluJb SINE Alu 1 309 -3 300 281 133 56 chr5 12439706 12439902 -190645630 + L1MC4a LINE L1 5783 5993 -1815 1793 186 0 0 chr5 12440026 12440306 -190645226 - AluJb SINE Alu -20 292 13 247 308 97 43 chr5 12440409 12440851 -190644681 + L1MC4a LINE L1 6219 6684 -1124 12176 207 48 15 chr5 12440969 12441708 -190643824 + L1M1 LINE L1 16 729 -6927 180 77 0 0 chr5 12441708 12441734 -190643798 + (TAA)n Simple_repeat Simple_repeat 2 27 0 12176 207 48 15 chr5 12441734 12446205 -190639327 + L1M1 LINE L1 729 6913 -743 369 221 59 22 chr5 12446487 12446623 -190638909 + L1MC4 LINE L1 7110 7250 -792 217 158 26 0 chr5 12447812 12447850 -190637682 + (TG)n Simple_repeat Simple_repeat 2 40 0 301 276 76 9 chr5 12449080 12449185 -190636347 - MIR3 SINE MIR -12 196 85 1129 260 123 20 chr5 12449941 12449991 -190635541 + L1MD3 LINE L1 6550 6593 -1265 273 29 0 0 chr5 12449991 12450025 -190635507 + (CA)n Simple_repeat Simple_repeat 1 34 0 1129 260 123 20 chr5 12450025 12450605 -190634927 + L1MD3 LINE L1 6593 7275 -583 481 227 47 0 chr5 12450609 12450737 -190634795 + MLT1F1 LTR MaLR 2 135 -432 21 0 0 0 chr5 12451266 12451287 -190634245 + AT_rich Low_complexity Low_complexity 1 21 0 2560 45 0 10 chr5 12451407 12451720 -190633812 - AluY SINE Alu -1 310 1 272 306 0 9 chr5 12452055 12452166 -190633366 + (CTA)n Simple_repeat Simple_repeat 1 110 0 519 155 0 0 chr5 12452171 12452274 -190633258 + (CCA)n Simple_repeat Simple_repeat 1 103 0 541 263 23 0 chr5 12452317 12452450 -190633082 + MER45A DNA AcHobo 3 138 -40 237 227 91 15 chr5 12452450 12452516 -190633016 - L1MCa LINE L1 -6330 96 26 194 0 0 37 chr5 12455552 12455579 -190629953 + (TTA)n Simple_repeat Simple_repeat 2 27 0 417 45 5 119 chr5 12456780 12456982 -190628550 + (TA)n Simple_repeat Simple_repeat 1 179 0 282 77 15 77 chr5 12457007 12457137 -190628395 + (TA)n Simple_repeat Simple_repeat 1 122 0 189 0 0 0 chr5 12458725 12458746 -190626786 + (CA)n Simple_repeat Simple_repeat 1 21 0 384 313 0 11 chr5 12458766 12458945 -190626587 + (CA)n Simple_repeat Simple_repeat 2 178 0 344 341 0 6 chr5 12459005 12459172 -190626360 + (CA)n Simple_repeat Simple_repeat 1 166 0 275 294 26 3 chr5 12460100 12460231 -190625301 - MIR SINE MIR -62 146 13 190 356 70 9 chr5 12460321 12460436 -190625096 - MIR3 SINE MIR -2 206 85 546 146 188 48 chr5 12461762 12461927 -190623605 - MER4A LTR ERV1 -1 464 277 2000 125 8 55 chr5 12461945 12462429 -190623103 - MER4A LTR ERV1 -241 423 1 1273 213 47 18 chr5 12463139 12463477 -190622055 + MLT2D LTR ERVL 7 354 -60 200 234 0 16 chr5 12463562 12463626 -190621906 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 264 130 0 0 chr5 12463639 12463685 -190621847 + (CA)n Simple_repeat Simple_repeat 1 46 0 1533 160 110 22 chr5 12463691 12464010 -190621522 + MER7A DNA MER2_type 1 345 -1 276 111 0 0 chr5 12464010 12464055 -190621477 + (TC)n Simple_repeat Simple_repeat 1 45 0 977 200 53 12 chr5 12464784 12465140 -190620392 + MLT2B3 LTR ERVL 183 554 0 384 260 60 7 chr5 12465220 12465370 -190620162 - MER106B DNA MER1_type -4 1055 898 288 67 22 0 chr5 12466137 12466182 -190619350 - MADE1 DNA Mariner -34 46 1 254 357 31 10 chr5 12468024 12468122 -190617410 - MIR SINE MIR -115 147 48 1388 175 0 0 chr5 12469625 12469842 -190615690 + AluSx SINE Alu 6 222 -90 486 0 0 0 chr5 12469848 12469902 -190615630 + (TAA)n Simple_repeat Simple_repeat 3 56 0 751 253 52 18 chr5 12469902 12470289 -190615243 - L1M4 LINE L1 -2840 4117 3718 2235 104 13 10 chr5 12470862 12471170 -190614362 + AluSx SINE Alu 1 309 -3 602 216 36 18 chr5 12471334 12471556 -190613976 + L1M4 LINE L1 2996 3221 -2925 2025 146 123 5 chr5 12471754 12472137 -190613395 - MSTA LTR MaLR 0 428 1 716 328 123 5 chr5 12472155 12472560 -190612972 - L1M4 LINE L1 -6071 788 336 1805 142 178 8 chr5 12472610 12472976 -190612556 + MSTA LTR MaLR 1 428 0 6009 163 21 42 chr5 12472978 12474188 -190611344 + MSTA-int LTR MaLR 3 1187 -393 1566 200 14 19 chr5 12474746 12475106 -190610426 - L1MD1 LINE L1 -3 6239 5882 2161 113 0 12 chr5 12475142 12475488 -190610044 + L1PB1 LINE L1 5438 5779 -372 554 41 14 0 chr5 12475489 12475562 -190609970 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 552 192 17 0 chr5 12475562 12475682 -190609850 - L1MD1 LINE L1 -45 6197 6076 408 20 0 0 chr5 12475690 12475739 -190609793 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2089 128 48 0 chr5 12475739 12476074 -190609458 + L1PB1 LINE L1 5799 6149 -2 427 233 166 38 chr5 12476096 12476595 -190608937 + Charlie2 DNA MER1_type 2276 2838 -24 1235 219 26 89 chr5 12477829 12477919 -190607613 + MLT1B LTR MaLR 1 95 -295 2116 149 16 19 chr5 12477919 12478295 -190607237 + THE1C LTR MaLR 1 375 0 1235 219 26 89 chr5 12478295 12478620 -190606912 + MLT1B LTR MaLR 95 390 0 1715 189 0 0 chr5 12479365 12479656 -190605876 - AluJb SINE Alu -21 291 1 782 267 84 28 chr5 12480675 12480745 -190604787 - LTR52 LTR ERVL -3 418 353 444 51 0 0 chr5 12480745 12480804 -190604728 + (CA)n Simple_repeat Simple_repeat 2 60 0 782 267 84 28 chr5 12480804 12481126 -190604406 - LTR52 LTR ERVL -68 353 4 1469 233 20 7 chr5 12482862 12483265 -190602267 - L1MD1 LINE L1 0 6242 5835 895 198 28 75 chr5 12483268 12483627 -190601905 - L1MDa LINE L1 -4767 1773 1432 399 106 0 0 chr5 12483738 12483804 -190601728 + (TG)n Simple_repeat Simple_repeat 1 66 0 11736 186 2 0 chr5 12484102 12487534 -190597998 + L1PA14 LINE L1 2766 6160 -1 2352 72 0 0 chr5 12488173 12488464 -190597068 - AluY SINE Alu -20 291 1 380 306 69 43 chr5 12491102 12491334 -190594198 - MIR SINE MIR -16 246 9 1477 248 46 36 chr5 12491679 12492203 -190593329 - MER65B LTR ERV1 0 531 3 1629 233 80 19 chr5 12492329 12492805 -190592727 - MLT1D LTR MaLR 0 505 1 334 230 120 78 chr5 12492944 12493135 -190592397 + L1ME LINE L1 3580 3778 -2368 40808 31 24 1 chr5 12493176 12499184 -190586348 + L1PA2 LINE L1 4 6155 0 346 260 64 87 chr5 12499184 12499357 -190586175 + L1ME LINE L1 3842 4010 -2136 327 287 16 16 chr5 12499373 12499495 -190586037 + L1ME LINE L1 5314 5435 -686 498 128 21 11 chr5 12499836 12499930 -190585602 + L1PA14 LINE L1 6066 6160 -1 5716 176 56 58 chr5 12500558 12502726 -190582806 + L1M4c LINE L1 391 2656 -3726 713 225 110 23 chr5 12502740 12502958 -190582574 + L1MB3 LINE L1 5929 6165 -18 279 180 0 0 chr5 12502979 12503029 -190582503 - MLT1C LTR MaLR -59 408 359 664 249 100 33 chr5 12503474 12503803 -190581729 - MLT1C LTR MaLR -116 351 1 447 269 159 16 chr5 12503812 12503968 -190581564 - MIR SINE MIR -58 150 16 223 217 22 0 chr5 12505578 12505624 -190579908 + GA-rich Low_complexity Low_complexity 2 48 0 249 331 39 62 chr5 12507341 12507471 -190578061 - L2 LINE L2 -5 3308 3182 962 281 19 11 chr5 12507721 12508088 -190577444 - MER63B DNA MER1_type -66 370 1 2571 29 0 16 chr5 12508246 12508562 -190576970 - AluY SINE Alu 0 311 1 26 0 0 0 chr5 12510377 12510403 -190575129 + AT_rich Low_complexity Low_complexity 1 26 0 2714 88 16 3 chr5 12510405 12510789 -190574743 - L1PA10 LINE L1 -11 6157 5769 22 0 0 0 chr5 12513112 12513134 -190572398 + AT_rich Low_complexity Low_complexity 1 22 0 24 91 0 0 chr5 12513532 12513598 -190571934 + AT_rich Low_complexity Low_complexity 1 66 0 189 0 0 0 chr5 12515520 12515541 -190569991 + (A)n Simple_repeat Simple_repeat 1 21 0 225 65 0 0 chr5 12515577 12515608 -190569924 + (TC)n Simple_repeat Simple_repeat 2 32 0 255 31 0 0 chr5 12515608 12515640 -190569892 + (CA)n Simple_repeat Simple_repeat 1 32 0 469 160 30 8 chr5 12519185 12519316 -190566216 + (TA)n Simple_repeat Simple_repeat 2 135 0 2259 105 0 3 chr5 12519766 12520072 -190565460 + AluSg SINE Alu 1 305 -5 282 29 0 0 chr5 12520155 12520190 -190565342 + (TG)n Simple_repeat Simple_repeat 2 36 0 1380 149 65 68 chr5 12520903 12521258 -190564274 - MLT1A2 LTR MaLR -20 354 1 25 0 0 0 chr5 12521365 12521390 -190564142 + AT_rich Low_complexity Low_complexity 1 25 0 2775 127 7 7 chr5 12522332 12522766 -190562766 - MER57B LTR ERV1 0 434 1 436 174 51 14 chr5 12523387 12523525 -190562007 + CT-rich Low_complexity Low_complexity 4 146 0 1799 158 35 0 chr5 12523530 12523814 -190561718 - AluJb SINE Alu -8 304 11 209 77 51 0 chr5 12524108 12524147 -190561385 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 1040 250 28 0 chr5 12524235 12524487 -190561045 + L1ME3 LINE L1 5896 6154 -8 230 196 0 0 chr5 12525202 12525248 -190560284 - L2 LINE L2 -4 3309 3264 674 303 0 5 chr5 12525518 12525713 -190559819 - MIR SINE MIR -42 220 27 826 277 81 63 chr5 12526214 12526744 -190558788 + MLT1F1 LTR MaLR 18 559 -8 214 275 154 0 chr5 12527259 12527350 -190558182 - L2 LINE L2 -5 3308 3204 183 111 0 0 chr5 12527396 12527423 -190558109 - L2 LINE L2 -22 3250 3224 201 375 34 0 chr5 12527458 12527546 -190557986 - MIR SINE MIR -124 138 48 304 294 86 37 chr5 12528904 12529091 -190556441 + MIR SINE MIR 65 260 -2 1675 132 191 38 chr5 12529435 12529806 -190555726 + MSTA LTR MaLR 1 428 0 873 258 30 17 chr5 12530249 12530548 -190554984 - L1M4 LINE L1 -5309 1233 931 1421 175 62 31 chr5 12531387 12531741 -190553791 - MLT1A1 LTR MaLR 0 365 1 769 258 114 54 chr5 12634251 12634817 -190450715 - MLT1F1 LTR MaLR -2 593 14 449 243 20 0 chr5 12635149 12635301 -190450231 - L1 LINE L1 -2793 3353 3199 5701 186 30 0 chr5 12635306 12636427 -190449105 + L1 LINE L1 3729 4883 -1263 2873 87 14 2 chr5 12636529 12636945 -190448587 + HERVL-A1 LTR ERVL 5234 5654 0 2941 71 2 40 chr5 12636945 12637365 -190448167 + MLT2A1 LTR ERVL 1 404 -40 307 196 0 0 chr5 12637377 12637433 -190448099 + L1MC4 LINE L1 6648 6703 -1339 406 91 0 9 chr5 12637449 12637513 -190448019 + MLT2A1 LTR ERVL 388 442 -2 369 123 18 0 chr5 12637514 12637571 -190447961 - MSTA LTR MaLR -370 58 1 1642 262 27 53 chr5 12637574 12638311 -190447221 + L1ME1 LINE L1 5441 6158 -8 2117 150 0 0 chr5 12639011 12639324 -190446208 + AluSq SINE Alu 1 313 0 242 261 35 61 chr5 12639715 12639830 -190445702 - MLT1J2 LTR MaLR -1 449 338 214 296 49 12 chr5 12640155 12640236 -190445296 + L2 LINE L2 2602 2685 -629 564 284 79 41 chr5 12640236 12640553 -190444979 + L2 LINE L2 2818 3146 -167 869 211 6 0 chr5 12640705 12640876 -190444656 - MER2 DNA MER2_type -172 173 2 246 246 15 15 chr5 12640881 12640946 -190444586 + L2 LINE L2 3152 3216 -97 299 296 6 17 chr5 12641067 12641246 -190444286 + (TA)n Simple_repeat Simple_repeat 2 178 0 3500 25 3 0 chr5 12641824 12642270 -190443262 - L1PA3 LINE L1 -484 5671 5225 3944 28 2 0 chr5 12642277 12642773 -190442759 + L1PA3 LINE L1 5671 6167 0 1500 197 112 0 chr5 12644428 12644733 -190440799 + MLT1A1 LTR MaLR 15 353 -12 738 299 37 13 chr5 12646668 12647114 -190438418 - MLT1F1 LTR MaLR -9 558 14 1261 120 0 6 chr5 12647219 12647442 -190438090 + AluSp SINE Alu 132 353 0 267 40 40 20 chr5 12648179 12648229 -190437303 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 298 234 138 48 chr5 12650042 12650187 -190435345 - MLT1J2 LTR MaLR -2 448 291 1904 152 7 0 chr5 12650366 12650662 -190434870 - AluSx SINE Alu -14 298 1 9895 189 33 25 chr5 12652362 12654194 -190431338 - L1M1 LINE L1 -3948 3617 1072 2093 164 5 19 chr5 12654194 12654561 -190430971 - THE1B LTR MaLR 0 364 3 9895 189 33 25 chr5 12654561 12655634 -190429898 - L1M1 LINE L1 -6493 1072 9 524 140 11 0 chr5 12655672 12655765 -190429767 + GA-rich Low_complexity Low_complexity 1 94 0 656 184 32 130 chr5 12655815 12655936 -190429596 + L1MC3 LINE L1 5215 5346 -1041 2206 109 0 0 chr5 12655936 12656229 -190429303 + AluSx SINE Alu 3 295 -17 656 184 32 130 chr5 12656229 12656512 -190429020 + L1MC3 LINE L1 5346 5571 -816 271 227 93 27 chr5 12656532 12656607 -190428925 + L1MC3 LINE L1 5524 5603 -2182 5561 220 53 45 chr5 12656609 12658239 -190427293 + L1MC3 LINE L1 5914 7556 -229 193 229 0 42 chr5 12658855 12658903 -190426629 - L2 LINE L2 -9 3263 3218 2353 73 0 0 chr5 12659327 12659628 -190425904 + AluY SINE Alu 1 301 -10 218 222 0 16 chr5 12660171 12660234 -190425298 + (TA)n Simple_repeat Simple_repeat 2 63 0 414 248 0 44 chr5 12661192 12661329 -190424203 - L1 LINE L1 -3207 2939 2809 23 68 0 0 chr5 12661329 12661373 -190424159 + AT_rich Low_complexity Low_complexity 1 44 0 1064 179 145 4 chr5 12661602 12661753 -190423779 + MLT1C LTR MaLR 28 156 -311 348 24 0 0 chr5 12661753 12661794 -190423738 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 35 0 0 chr5 12661793 12661822 -190423710 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 1064 179 145 4 chr5 12661794 12661904 -190423628 + MLT1C LTR MaLR 156 294 -173 1465 306 72 8 chr5 12662236 12662990 -190422542 + L1ME LINE L1 27 828 -5242 1365 271 103 21 chr5 12663052 12663520 -190422012 - MLT2B1 LTR ERVL -14 506 1 340 248 0 9 chr5 12663531 12663640 -190421892 + L1ME LINE L1 884 991 -5079 198 0 0 0 chr5 12663653 12663675 -190421857 + (TC)n Simple_repeat Simple_repeat 1 22 0 456 136 0 0 chr5 12664107 12664173 -190421359 + AluS SINE Alu 1 66 -244 355 385 95 22 chr5 12664225 12664583 -190420949 + L1ME1 LINE L1 228 611 -5785 1544 225 62 58 chr5 12664588 12665086 -190420446 + MLT1D LTR MaLR 6 505 0 261 254 106 48 chr5 12665137 12665520 -190420012 + L1ME1 LINE L1 670 1025 -5180 4761 281 72 41 chr5 12665748 12668989 -190416543 + L1ME1 LINE L1 1316 4682 -1558 2058 121 0 0 chr5 12668989 12669271 -190416261 + AluSq SINE Alu 21 302 -11 4761 281 72 41 chr5 12669271 12670114 -190415418 + L1ME1 LINE L1 4682 5497 -743 1031 271 54 19 chr5 12670137 12670562 -190414970 + L1ME1 LINE L1 5789 6228 -7 222 338 13 13 chr5 12671198 12671275 -190414257 - L2 LINE L2 -24 3248 3172 247 243 14 27 chr5 12672496 12672570 -190412962 + GA-rich Low_complexity Low_complexity 2 74 0 30 59 0 0 chr5 12672894 12672945 -190412587 + AT_rich Low_complexity Low_complexity 1 51 0 481 281 121 0 chr5 12673501 12673700 -190411832 + L1M4 LINE L1 14 236 -6306 1221 150 50 32 chr5 12673713 12673933 -190411599 + AluSg/x SINE Alu 87 310 0 1499 281 102 31 chr5 12673957 12674545 -190410987 + L1M4 LINE L1 274 903 -5639 479 260 39 43 chr5 12674554 12674762 -190410770 + L1M4 LINE L1 1487 1693 -4953 2379 259 97 24 chr5 12674765 12675918 -190409614 + L1M4 LINE L1 4701 5943 -733 2233 134 32 16 chr5 12675918 12676287 -190409245 - MSTA LTR MaLR 0 428 27 3179 73 4 77 chr5 12676287 12676684 -190408848 + MLT2A1 LTR ERVL 1 403 -41 217 71 0 48 chr5 12676684 12676726 -190408806 + (TA)n Simple_repeat Simple_repeat 2 41 0 3179 73 4 77 chr5 12676726 12676766 -190408766 + MLT2A1 LTR ERVL 403 444 0 31845 82 4 1 chr5 12676770 12681112 -190404420 + HERVL-A1 LTR ERVL 5 4362 -1292 1929 111 26 15 chr5 12681212 12681553 -190403979 + L1MA3 LINE L1 3273 3617 -3948 207 100 0 0 chr5 12681597 12681658 -190403874 + (CA)n Simple_repeat Simple_repeat 1 91 0 207 100 0 0 chr5 12681658 12681688 -190403844 + (CA)n Simple_repeat Simple_repeat 1 30 0 1053 227 141 29 chr5 12681724 12682107 -190403425 + L1MA3 LINE L1 3628 4053 -3512 7463 111 9 0 chr5 12682107 12683202 -190402330 + THE1C-int LTR MaLR 476 1580 0 505 66 197 0 chr5 12683202 12683278 -190402254 + THE1C LTR MaLR 1 91 -284 235 211 0 35 chr5 12683299 12683356 -190402176 + MST-int LTR MaLR 1 55 -1596 2097 125 48 28 chr5 12683368 12683760 -190401772 + MSTA LTR MaLR 29 428 0 5590 166 15 22 chr5 12683760 12685185 -190400347 + L1MA3 LINE L1 5829 7240 -484 2354 97 3 0 chr5 12685185 12685485 -190400047 + AluSp SINE Alu 1 301 -12 5590 166 15 22 chr5 12685485 12685966 -190399566 + L1MA3 LINE L1 7240 7723 -1 411 269 0 14 chr5 12686012 12686157 -190399375 - L1M4 LINE L1 -1114 5032 4890 310 216 85 45 chr5 12686174 12686350 -190399182 - L1MCa LINE L1 -4413 2231 2049 467 31 10 188 chr5 12686393 12686433 -190399099 + MADE1 DNA Mariner 1 16 -64 2439 73 3 0 chr5 12686433 12686736 -190398796 - AluY SINE Alu -7 304 1 467 31 10 188 chr5 12686736 12686791 -190398741 + MADE1 DNA Mariner 16 79 -1 602 246 191 15 chr5 12686817 12687146 -190398386 - L1MCa LINE L1 -4887 1759 1373 303 330 183 16 chr5 12687147 12687529 -190398003 - L1MCa LINE L1 -5202 1344 899 278 295 9 9 chr5 12687607 12687712 -190397820 - L1MCa LINE L1 -5668 874 770 396 296 24 19 chr5 12688184 12688390 -190397142 - L1MCa LINE L1 -6320 222 16 553 234 0 7 chr5 12689625 12689779 -190395753 - L1MA10 LINE L1 -1 6333 6181 543 249 42 14 chr5 12689795 12689989 -190395543 + MLT1F1 LTR MaLR 388 565 -2 26 74 0 0 chr5 12689992 12690046 -190395486 + AT_rich Low_complexity Low_complexity 1 54 0 189 159 0 0 chr5 12691767 12691811 -190393721 + (TG)n Simple_repeat Simple_repeat 1 44 0 290 349 127 16 chr5 12692953 12693142 -190392390 + MIR SINE MIR 15 224 -38 188 381 0 0 chr5 12695430 12695527 -190390005 + L2 LINE L2 2397 2493 -821 553 117 53 12 chr5 12696107 12696278 -190389254 + (CA)n Simple_repeat Simple_repeat 1 178 0 449 86 43 0 chr5 12696358 12696451 -190389081 + (CA)n Simple_repeat Simple_repeat 2 98 0 24 0 0 0 chr5 12697393 12697417 -190388115 + AT_rich Low_complexity Low_complexity 1 24 0 1456 200 28 17 chr5 12697417 12697707 -190387825 - AluJo SINE Alu -19 293 1 201 94 0 0 chr5 12697746 12697778 -190387754 + (CA)n Simple_repeat Simple_repeat 1 32 0 231 36 0 0 chr5 12698067 12698095 -190387437 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 64 0 0 chr5 12698520 12698567 -190386965 + AT_rich Low_complexity Low_complexity 1 47 0 225 247 23 132 chr5 12699085 12699259 -190386273 + MLT1H LTR MaLR 392 546 -3 364 391 31 9 chr5 12699903 12700128 -190385404 - MIR SINE MIR -17 245 16 192 125 0 0 chr5 12700556 12700588 -190384944 + (TG)n Simple_repeat Simple_repeat 1 32 0 2211 109 10 3 chr5 12701592 12701896 -190383636 - AluSc SINE Alu -3 306 1 2446 75 16 0 chr5 12702931 12703236 -190382296 - AluSg SINE Alu 0 310 1 561 232 91 17 chr5 12703590 12703798 -190381734 - MLT1C LTR MaLR -19 428 227 1831 172 0 26 chr5 12704591 12704899 -190380633 - AluSx SINE Alu -12 300 1 232 310 69 0 chr5 12705620 12705736 -190379796 + L2 LINE L2 3189 3312 -1 505 294 133 64 chr5 12705790 12706225 -190379307 - L2 LINE L2 -1 3312 2848 554 262 142 44 chr5 12706258 12706689 -190378843 + L2 LINE L2 2324 2796 -518 258 313 14 21 chr5 12706706 12706850 -190378682 - LTR33 LTR ERVL -2 519 377 33 25 0 0 chr5 12707513 12707553 -190377979 + AT_rich Low_complexity Low_complexity 1 40 0 275 143 0 18 chr5 12707580 12707636 -190377896 + (TG)n Simple_repeat Simple_repeat 1 55 0 1045 240 108 39 chr5 12707654 12708088 -190377444 - MLT2B1 LTR ERVL -54 466 3 21 0 0 0 chr5 12708412 12708433 -190377099 + AT_rich Low_complexity Low_complexity 1 21 0 1130 216 115 49 chr5 12708472 12708940 -190376592 + MLT1D LTR MaLR 7 505 0 432 266 147 39 chr5 12710392 12710678 -190374854 + L2 LINE L2 2027 2343 -971 383 305 107 27 chr5 12712061 12712323 -190373209 - L2 LINE L2 -11 3302 3020 210 91 0 0 chr5 12712355 12712388 -190373144 + (CA)n Simple_repeat Simple_repeat 2 34 0 374 309 0 5 chr5 12712403 12712617 -190372915 + (CA)n Simple_repeat Simple_repeat 1 212 0 459 356 0 0 chr5 12712631 12712811 -190372721 + (CA)n Simple_repeat Simple_repeat 1 180 0 2447 130 8 3 chr5 12713134 12713496 -190372036 + THE1B LTR MaLR 1 364 0 627 391 65 15 chr5 12714075 12714617 -190370915 + L3 LINE CR1 209 777 -800 65 35 0 0 chr5 12715101 12715187 -190370345 + AT_rich Low_complexity Low_complexity 1 86 0 23 0 0 0 chr5 12717522 12717545 -190367987 + AT_rich Low_complexity Low_complexity 1 23 0 689 209 0 0 chr5 12719908 12720056 -190365476 - L1MA3 LINE L1 0 6305 6158 816 155 128 59 chr5 12720060 12720216 -190365316 - MSTA LTR MaLR -228 200 56 1995 136 51 28 chr5 12720216 12720569 -190364963 + THE1B LTR MaLR 4 364 0 11443 105 3 5 chr5 12720569 12722152 -190363380 + THE1B-int LTR MaLR 1 1580 0 1917 140 68 31 chr5 12722152 12722503 -190363029 + THE1B LTR MaLR 1 364 0 816 155 128 59 chr5 12722503 12722531 -190363001 - MSTA LTR MaLR -371 57 1 3347 183 13 10 chr5 12722533 12723243 -190362289 - L1MA3 LINE L1 -145 6160 5449 2664 175 24 0 chr5 12723247 12723934 -190361598 + L1M1 LINE L1 4783 5489 -743 482 135 0 67 chr5 12724057 12724161 -190361371 - L1PB4 LINE L1 -8 6148 6052 1833 268 44 33 chr5 12724180 12724930 -190360602 - L1ME1 LINE L1 -4 6162 5405 22 0 0 0 chr5 12725183 12725205 -190360327 + AT_rich Low_complexity Low_complexity 1 22 0 195 69 0 0 chr5 12725228 12725257 -190360275 + (TATAA)n Simple_repeat Simple_repeat 2 30 0 4918 217 45 63 chr5 12725261 12726549 -190358983 + L1 LINE L1 3302 4551 -1595 826 86 0 0 chr5 12726549 12726665 -190358867 + L1PA13 LINE L1 6041 6156 -7 4918 217 45 63 chr5 12726665 12727165 -190358367 + L1 LINE L1 4551 5058 -1088 1840 264 28 10 chr5 12727506 12728112 -190357420 + L1MD3 LINE L1 7321 7937 -58 773 259 18 54 chr5 12728128 12728460 -190357072 - L1MA9 LINE L1 -40 6272 5953 776 268 20 0 chr5 12730929 12731179 -190354353 + L1MD3 LINE L1 7741 7995 0 277 301 87 0 chr5 12731678 12731781 -190353751 - L2 LINE L2 0 3272 3161 29 60 0 0 chr5 12733493 12733543 -190351989 + AT_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr5 12734150 12734178 -190351354 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 12735059 12735087 -190350445 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 12736663 12736686 -190348846 + AT_rich Low_complexity Low_complexity 1 23 0 307 94 0 0 chr5 12738690 12738743 -190346789 + AluSc SINE Alu 247 299 0 265 335 98 56 chr5 12740499 12740980 -190344552 - L2 LINE L2 -3 3310 2810 561 228 35 7 chr5 12741157 12741302 -190344230 - Tigger7 DNA MER2_type 0 2587 2439 * 1646 186 39 6 chr5 12741297 12741630 -190343902 - Tigger7 DNA MER2_type -2143 344 1 669 323 26 9 chr5 12745014 12745246 -190340286 - MIR SINE MIR -18 244 9 738 236 33 19 chr5 12747022 12747234 -190338298 + MER20 DNA MER1_type 1 215 -4 855 108 8 0 chr5 12748483 12748612 -190336920 - L1PA7 LINE L1 -1 6153 6024 220 358 0 0 chr5 12748974 12749041 -190336491 + L2 LINE L2 2448 2514 -800 222 301 83 95 chr5 12749320 12749839 -190335693 - L2 LINE L2 -264 3049 2504 22 56 0 0 chr5 12752529 12752565 -190332967 + AT_rich Low_complexity Low_complexity 1 36 0 498 194 7 21 chr5 12753156 12753300 -190332232 + GA-rich Low_complexity Low_complexity 3 144 0 1805 182 13 3 chr5 12756355 12756777 -190328755 - AluJb SINE Alu 0 425 1 4736 91 48 14 chr5 12756819 12757532 -190328000 - L1PA11 LINE L1 -2 6172 5436 1152 220 81 55 chr5 12758771 12759046 -190326486 + MLT1C LTR MaLR 1 294 -173 2127 126 3 10 chr5 12759046 12759355 -190326177 + AluSq SINE Alu 5 311 -2 1152 220 81 55 chr5 12759355 12759534 -190325998 + MLT1C LTR MaLR 294 467 0 324 279 9 36 chr5 12761964 12762075 -190323457 + MIR SINE MIR 23 130 -132 481 268 118 52 chr5 12762107 12762488 -190323044 - LTR33A LTR ERVL 0 523 118 2691 92 16 3 chr5 12763638 12764008 -190321524 + THE1C LTR MaLR 1 375 0 414 129 5 4 chr5 12764038 12764248 -190321284 - AluSc SINE Alu -18 291 1 21 36 0 0 chr5 12764281 12764309 -190321223 + AT_rich Low_complexity Low_complexity 1 28 0 1282 137 11 157 chr5 12764310 12764667 -190320865 - L1MA4 LINE L1 -281 6019 5715 1998 153 3 0 chr5 12764693 12764993 -190320539 + AluSx SINE Alu 1 301 -11 302 271 126 13 chr5 12765637 12765788 -190319744 + MER58C DNA MER1_type 44 211 -4 302 260 30 40 chr5 12765871 12765971 -190319561 - L2 LINE L2 -6 3307 3209 501 291 77 52 chr5 12766004 12766406 -190319126 - MLT1H LTR MaLR 0 549 138 215 53 0 53 chr5 12768618 12768656 -190316876 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 747 326 94 32 chr5 12769161 12769416 -190316116 + L2 LINE L2 2445 2683 -630 360 0 0 0 chr5 12769416 12769456 -190316076 + (CA)n Simple_repeat Simple_repeat 2 41 0 747 326 94 32 chr5 12769456 12770010 -190315522 + L2 LINE L2 2683 3313 0 229 293 65 49 chr5 12770127 12770250 -190315282 + MIR SINE MIR 23 147 -61 186 402 8 8 chr5 12771852 12771969 -190313563 - MIR3 SINE MIR -54 154 38 929 230 102 59 chr5 12772058 12772120 -190313412 - MLT1C LTR MaLR -4 463 405 2707 75 0 0 chr5 12772120 12772468 -190313064 + L1PA7 LINE L1 5799 6146 -8 929 230 102 59 chr5 12772468 12772844 -190312688 - MLT1C LTR MaLR -62 405 6 268 301 81 97 chr5 12773412 12773598 -190311934 - MIR SINE MIR -12 250 68 21 0 0 0 chr5 12774570 12774591 -190310941 + AT_rich Low_complexity Low_complexity 1 21 0 1462 226 88 94 chr5 12775718 12776590 -190308942 + LTR28 LTR ERV1 1 1020 0 254 372 96 5 chr5 12776696 12776884 -190308648 + MIR SINE MIR 40 244 -18 188 357 161 0 chr5 12777230 12777342 -190308190 + L2 LINE L2 2931 3060 -253 1584 225 59 47 chr5 12778073 12778684 -190306848 + MLT1B-int LTR MaLR 1 726 -645 1304 264 59 25 chr5 12779024 12779429 -190306103 + MLT1B-int LTR MaLR 1317 1735 0 810 216 98 84 chr5 12779444 12779801 -190305731 + MLT1B LTR MaLR 13 374 -16 212 179 0 0 chr5 12780652 12780691 -190304841 + T-rich Low_complexity Low_complexity 1 39 0 1014 82 0 0 chr5 12781206 12781352 -190304180 + (CAT)n Simple_repeat Simple_repeat 3 148 0 743 215 145 8 chr5 12781724 12781966 -190303566 + L1ME1 LINE L1 5887 6161 -5 209 89 44 22 chr5 12783431 12783476 -190302056 + A-rich Low_complexity Low_complexity 2 47 0 1280 174 103 88 chr5 12783605 12784002 -190301530 + MER57A LTR ERV1 1 403 0 331 282 92 6 chr5 12785558 12785732 -190299800 + LTR16A LTR ERVL 161 349 -101 301 188 0 14 chr5 12785752 12785821 -190299711 - MLT2B1 LTR ERVL -47 367 300 198 0 0 0 chr5 12785849 12785871 -190299661 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 742 261 15 44 chr5 12785920 12786192 -190299340 - MLT2B1 LTR ERVL -255 265 2 681 231 11 0 chr5 12786529 12786715 -190298817 - MER53 DNA DNA -1 188 1 1407 229 54 9 chr5 12787977 12788326 -190297206 + MLT1A1 LTR MaLR 1 365 0 28 29 0 0 chr5 12788359 12788394 -190297138 + AT_rich Low_complexity Low_complexity 1 35 0 635 327 133 35 chr5 12788959 12789620 -190295912 - L2 LINE L2 -8 3305 2563 1972 129 7 0 chr5 12790402 12790705 -190294827 - AluSq SINE Alu 0 305 1 9307 199 22 20 chr5 12791754 12795131 -190290401 - L1MA6 LINE L1 -5 6295 2915 225 323 50 0 chr5 12798086 12798185 -190287347 + MIR SINE MIR 104 207 -55 1726 185 12 0 chr5 12798249 12798595 -190286937 - MLT1B LTR MaLR -40 350 1 281 285 123 37 chr5 12798746 12799121 -190286411 - L1ME4a LINE L1 -65 6056 5650 379 315 27 9 chr5 12799139 12799250 -190286282 + L2 LINE L2 3160 3272 0 1131 178 102 6 chr5 12801221 12801540 -190283992 - MER47B DNA MER2_type 0 418 1 262 361 31 0 chr5 12802398 12802495 -190283037 - MIR SINE MIR -73 135 36 249 299 11 35 chr5 12803164 12803251 -190282281 - MER5B DNA MER1_type -73 105 21 211 313 16 16 chr5 12803194 12803258 -190282274 + MER5A DNA MER1_type 113 176 -13 * 597 219 55 7 chr5 12804550 12804696 -190280836 - MER5A DNA MER1_type -34 155 3 295 160 0 0 chr5 12805592 12805642 -190279890 + MER5A DNA MER1_type 3 52 -137 36 23 0 0 chr5 12805999 12806042 -190279490 + AT_rich Low_complexity Low_complexity 1 43 0 260 311 53 62 chr5 12811167 12811489 -190274043 - L1MEd LINE L1 -5483 636 318 499 168 40 12 chr5 12811960 12812133 -190273399 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 21 36 0 0 chr5 12813478 12813506 -190272026 + AT_rich Low_complexity Low_complexity 1 28 0 611 62 0 0 chr5 12813701 12813781 -190271751 + MADE1 DNA Mariner 1 80 0 526 261 109 32 chr5 12814437 12814840 -190270692 + MLT1J LTR MaLR 1 511 0 343 329 57 14 chr5 12815588 12815728 -190269804 - L2 LINE L2 -1 3312 3167 308 298 56 76 chr5 12816413 12816611 -190268921 - L1ME2 LINE L1 -23 6141 5948 1324 246 39 48 chr5 12816663 12817370 -190268162 - L1ME3A LINE L1 -298 5864 5153 3188 3 0 6 chr5 12817386 12817748 -190267784 - L1PA2 LINE L1 0 6155 5796 390 21 0 0 chr5 12820117 12820164 -190265368 + (CA)n Simple_repeat Simple_repeat 2 48 0 1371 217 37 80 chr5 12824080 12824568 -190260964 - MLT1C LTR MaLR 0 467 1 306 0 0 0 chr5 12824818 12824852 -190260680 + (TG)n Simple_repeat Simple_repeat 1 34 0 1763 103 91 0 chr5 12825330 12825593 -190259939 + AluSx SINE Alu 1 287 -25 472 239 45 30 chr5 12826527 12826661 -190258871 - L2 LINE L2 0 3313 3178 2064 134 0 13 chr5 12826998 12827312 -190258220 - AluSg SINE Alu 0 310 1 181 365 21 21 chr5 12827590 12827686 -190257846 + L2 LINE L2 2589 2684 -630 2811 60 0 0 chr5 12827766 12828119 -190257413 - L1PA8 LINE L1 -3 6169 5817 2517 60 0 19 chr5 12828616 12828931 -190256601 + AluY SINE Alu 1 309 -2 235 102 20 20 chr5 12830122 12830171 -190255361 + (TA)n Simple_repeat Simple_repeat 1 49 0 325 146 8 49 chr5 12830230 12830353 -190255179 + (TA)n Simple_repeat Simple_repeat 1 118 0 396 201 0 50 chr5 12830407 12830586 -190254946 + (TA)n Simple_repeat Simple_repeat 1 170 0 468 172 0 59 chr5 12830610 12831079 -190254453 + (TA)n Simple_repeat Simple_repeat 1 441 0 1591 172 58 3 chr5 12831820 12832111 -190253421 + AluJo SINE Alu 2 308 -4 323 333 32 0 chr5 12833170 12833296 -190252236 + (TATG)n Simple_repeat Simple_repeat 2 131 0 520 250 11 0 chr5 12833298 12833474 -190252058 + (TA)n Simple_repeat Simple_repeat 1 178 0 702 344 4 0 chr5 12833498 12833728 -190251804 - MIR SINE MIR -12 250 20 982 206 54 10 chr5 12833736 12833940 -190251592 - MER20 DNA MER1_type 0 219 7 234 270 119 16 chr5 12833992 12834118 -190251414 - L1ME4a LINE L1 -31 6090 5952 1499 203 3 14 chr5 12834179 12834497 -190251035 - AluJo SINE Alu 0 312 1 21 82 0 0 chr5 12834646 12834695 -190250837 + AT_rich Low_complexity Low_complexity 1 49 0 818 169 19 20 chr5 12835099 12835366 -190250166 + AluJ SINE Alu 7 306 -6 24 32 0 0 chr5 12835405 12835436 -190250096 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr5 12835529 12835558 -190249974 + (TG)n Simple_repeat Simple_repeat 2 30 0 252 59 0 0 chr5 12836454 12836488 -190249044 + (TG)n Simple_repeat Simple_repeat 2 35 0 2595 173 12 12 chr5 12837266 12837532 -190248000 - MSTA LTR MaLR 0 428 160 2440 34 40 7 chr5 12837532 12837830 -190247702 + AluY SINE Alu 1 308 -3 2595 173 12 12 chr5 12837830 12837990 -190247542 - MSTA LTR MaLR -267 161 2 709 250 10 39 chr5 12838699 12838907 -190246625 + MER20 DNA MER1_type 14 215 -4 1913 125 16 13 chr5 12839390 12839695 -190245837 - AluSx SINE Alu -6 306 1 2290 100 0 13 chr5 12840158 12840469 -190245063 + AluSx SINE Alu 1 307 -5 445 331 0 0 chr5 12840731 12840861 -190244671 + GA-rich Low_complexity Low_complexity 2 131 0 207 286 48 36 chr5 12841064 12841148 -190244384 - L2 LINE L2 -20 3252 3168 423 0 0 0 chr5 12841587 12841634 -190243898 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 12843064 12843094 -190242438 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 12843511 12843541 -190241991 + AT_rich Low_complexity Low_complexity 1 30 0 1685 309 68 25 chr5 12843548 12843918 -190241614 + L1MEc LINE L1 297 650 -5746 2209 110 3 10 chr5 12843918 12844226 -190241306 + AluSq SINE Alu 3 308 -5 1685 309 68 25 chr5 12844226 12844863 -190240669 + L1MEc LINE L1 650 1347 -5049 401 285 27 37 chr5 12845025 12845249 -190240283 - L1MCa LINE L1 -894 1893 1511 586 293 86 80 chr5 12845299 12845685 -190239847 + MLT1F1 LTR MaLR 3 390 -152 4880 115 1 0 chr5 12845687 12846348 -190239184 + THE1A-int LTR MaLR 919 1580 0 2557 113 6 8 chr5 12846348 12846702 -190238830 + THE1A LTR MaLR 1 353 -2 420 281 114 33 chr5 12846943 12847153 -190238379 + MIR SINE MIR 6 232 -30 187 356 20 20 chr5 12847567 12847668 -190237864 + MIR3 SINE MIR 65 165 -43 2364 157 3 3 chr5 12847677 12848041 -190237491 + THE1B LTR MaLR 1 364 0 931 276 85 34 chr5 12849235 12849587 -190235945 - MLT1A2 LTR MaLR -4 370 1 22 0 0 0 chr5 12849945 12849967 -190235565 + AT_rich Low_complexity Low_complexity 1 22 0 2352 110 0 0 chr5 12850632 12850942 -190234590 - AluSx SINE Alu -2 310 1 226 228 98 43 chr5 12851349 12851441 -190234091 + MIR SINE MIR 94 190 -72 264 300 31 31 chr5 12853687 12853817 -190231715 - MER5A DNA MER1_type -6 183 54 27 29 0 0 chr5 12853938 12853972 -190231560 + AT_rich Low_complexity Low_complexity 1 34 0 210 37 0 0 chr5 12855018 12855045 -190230487 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 182 58 0 chr5 12855049 12855203 -190230329 + (TA)n Simple_repeat Simple_repeat 2 164 0 1680 175 77 72 chr5 12855369 12855757 -190229775 - MLT1B LTR MaLR 0 390 1 200 91 0 30 chr5 12856910 12856943 -190228589 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2069 144 7 0 chr5 12857566 12857898 -190227634 + AluSg SINE Alu 1 334 0 1683 175 0 0 chr5 12857898 12858172 -190227360 + MER7A DNA MER2_type 65 336 -10 608 214 27 86 chr5 12859352 12859572 -190225960 + MIR SINE MIR 32 238 -24 224 174 0 22 chr5 12859586 12859632 -190225900 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2094 131 3 0 chr5 12861153 12861450 -190224082 + AluSq SINE Alu 1 298 -15 2235 88 0 33 chr5 12864943 12865248 -190220284 - AluY SINE Alu -16 295 1 1402 127 0 0 chr5 12865290 12865502 -190220030 + AluSg/x SINE Alu 98 309 -3 915 104 7 30 chr5 12865651 12865786 -190219746 - L1PB1 LINE L1 -4 6147 6016 2337 163 5 21 chr5 12866594 12866975 -190218557 - THE1C LTR MaLR 0 375 1 757 231 14 53 chr5 12867455 12867663 -190217869 - MER20 DNA MER1_type -18 201 2 719 262 99 26 chr5 12867691 12867924 -190217608 - MIR SINE MIR -16 246 1 686 311 101 15 chr5 12868324 12868904 -190216628 + L1MC4 LINE L1 6336 7062 -980 2182 128 0 10 chr5 12868988 12869301 -190216231 - AluSx SINE Alu -2 310 1 381 271 62 8 chr5 12869587 12869716 -190215816 + L1MC4a LINE L1 7275 7410 -398 334 243 7 30 chr5 12871070 12871376 -190214156 + GA-rich Low_complexity Low_complexity 1 298 0 29 47 0 0 chr5 12871716 12871759 -190213773 + AT_rich Low_complexity Low_complexity 1 43 0 1874 142 35 0 chr5 12873790 12874079 -190211453 + AluSq SINE Alu 1 299 -14 922 281 29 32 chr5 12874616 12874993 -190210539 + L1MC4a LINE L1 6542 6917 -891 3582 150 47 66 chr5 12875794 12876381 -190209151 - MER50 LTR ERV1 -23 711 139 1994 129 37 0 chr5 12876381 12876676 -190208856 - AluSx SINE Alu -6 306 1 3582 150 47 66 chr5 12876676 12876813 -190208719 - MER50 LTR ERV1 -595 139 1 3582 166 33 24 chr5 12877219 12878151 -190207381 + L1MA4 LINE L1 4647 5606 -694 1994 138 3 0 chr5 12878151 12878440 -190207092 + AluSp SINE Alu 2 291 -22 3582 166 33 24 chr5 12878440 12878781 -190206751 + L1MA4 LINE L1 5606 5943 -357 2207 128 0 0 chr5 12879618 12879915 -190205617 + AluSx SINE Alu 3 299 -13 1324 217 92 73 chr5 12880054 12880338 -190205194 + MER77 LTR ERV1 180 522 -155 1727 149 34 3 chr5 12880338 12880634 -190204898 - AluSx SINE Alu -3 309 5 1324 217 92 73 chr5 12880634 12880789 -190204743 + MER77 LTR ERV1 522 673 -4 1134 261 157 76 chr5 12880901 12882209 -190203323 - HAL1 LINE L1 -1 2506 1093 23 86 0 0 chr5 12882235 12882293 -190203239 + AT_rich Low_complexity Low_complexity 1 58 0 571 277 158 55 chr5 12882372 12882896 -190202636 - HAL1 LINE L1 -1433 1074 497 234 229 330 0 chr5 12883002 12883111 -190202421 - HAL1 LINE L1 -2341 166 22 192 77 0 0 chr5 12884264 12884290 -190201242 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2480 60 13 3 chr5 12888090 12888390 -190197142 - AluY SINE Alu -8 303 1 631 132 88 0 chr5 12888787 12888901 -190196631 + MSTB LTR MaLR 1 124 -302 32 57 0 0 chr5 12892459 12892512 -190193020 + AT_rich Low_complexity Low_complexity 1 53 0 414 0 0 0 chr5 12892551 12892597 -190192935 + (TG)n Simple_repeat Simple_repeat 2 47 0 1894 169 0 0 chr5 12894453 12894749 -190190783 - AluSx SINE Alu -16 296 1 1654 236 97 39 chr5 12896378 12896517 -190189015 + MLT1F1 LTR MaLR 1 131 -436 1707 196 58 3 chr5 12896517 12896863 -190188669 + MLT1A1 LTR MaLR 1 365 0 1654 236 97 39 chr5 12896863 12897258 -190188274 + MLT1F1 LTR MaLR 131 566 -1 827 329 19 3 chr5 12897268 12897590 -190187942 + L1ME3A LINE L1 5655 5981 -189 743 263 56 5 chr5 12897659 12897872 -190187660 - MER58A DNA MER1_type 0 224 1 281 342 96 33 chr5 12899084 12899482 -190186050 + HsTC2 DNA Tc2 469 891 -1007 197 0 71 0 chr5 12900616 12900644 -190184888 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 22 35 0 0 chr5 12900972 12901001 -190184531 + AT_rich Low_complexity Low_complexity 1 29 0 677 149 11 33 chr5 12901027 12901208 -190184324 + GA-rich Low_complexity Low_complexity 2 178 0 330 93 13 53 chr5 12901208 12901283 -190184249 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 195 184 0 0 chr5 12902569 12902607 -190182925 + CT-rich Low_complexity Low_complexity 2 39 0 345 197 0 0 chr5 12903053 12903129 -190182403 + GA-rich Low_complexity Low_complexity 3 78 0 21 0 0 0 chr5 12904914 12904935 -190180597 + AT_rich Low_complexity Low_complexity 1 21 0 2924 194 28 36 chr5 12905543 12905706 -190179826 + L1MC3 LINE L1 7050 7213 -572 2150 91 13 39 chr5 12905706 12906014 -190179518 - AluY SINE Alu -11 300 1 2924 194 28 36 chr5 12906014 12906464 -190179068 + L1MC3 LINE L1 7213 7658 -127 791 146 0 6 chr5 12907672 12907836 -190177696 + (TG)n Simple_repeat Simple_repeat 2 164 0 249 33 0 0 chr5 12911277 12911307 -190174225 + (T)n Simple_repeat Simple_repeat 1 30 0 2463 53 0 7 chr5 12913942 12914244 -190171288 - AluY SINE Alu -11 300 1 315 0 0 0 chr5 12914760 12914795 -190170737 + (TG)n Simple_repeat Simple_repeat 2 36 0 278 267 0 0 chr5 12914919 12914979 -190170553 + MER63 DNA MER1_type 689 748 -313 229 188 21 0 chr5 12914982 12915030 -190170502 + MER63 DNA MER1_type 978 1026 -35 2624 199 25 12 chr5 12915224 12915712 -190169820 - MER21B LTR ERV1 -369 494 1 189 0 0 0 chr5 12916391 12916412 -190169120 + (CA)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 13018779 13018807 -190066725 + AT_rich Low_complexity Low_complexity 1 28 0 818 220 39 17 chr5 13019011 13019243 -190066289 - L1MB3 LINE L1 -7 6176 5940 2395 88 0 0 chr5 13019245 13019540 -190065992 + AluSg SINE Alu 1 295 -15 2179 105 52 50 chr5 13019540 13019903 -190065629 - THE1B LTR MaLR 0 364 1 230 190 0 17 chr5 13021155 13021213 -190064319 + (TA)n Simple_repeat Simple_repeat 1 57 0 2078 117 0 0 chr5 13021686 13021967 -190063565 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 13021971 13021992 -190063540 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1869 31 0 0 chr5 13022112 13022337 -190063195 - L1PA4 LINE L1 -1 6154 5930 228 100 0 0 chr5 13022461 13022501 -190063031 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 234 0 0 0 chr5 13023246 13023272 -190062260 + (CA)n Simple_repeat Simple_repeat 2 27 0 768 201 24 6 chr5 13024142 13024306 -190061226 + FRAM SINE Alu 2 168 -8 2569 115 5 3 chr5 13024366 13024750 -190060782 - L1PA10 LINE L1 -15 6153 5769 580 239 86 24 chr5 13024759 13024989 -190060543 - L1MC4 LINE L1 -1020 7022 6689 2472 39 0 36 chr5 13025681 13026016 -190059516 - L1PA3 LINE L1 0 6155 5833 6643 62 26 2 chr5 13026176 13027800 -190057732 + L1PA8 LINE L1 4509 6166 -6 204 273 18 18 chr5 13027891 13027946 -190057586 + L2 LINE L2 3259 3313 0 379 169 0 0 chr5 13028171 13028236 -190057296 + MER89 LTR ERV1 7 71 -488 1453 223 29 14 chr5 13028244 13028594 -190056938 + MER89 LTR ERV1 185 539 -20 690 206 31 10 chr5 13028596 13028790 -190056742 + MLT1A1 LTR MaLR 1 198 -167 821 315 108 11 chr5 13029174 13029293 -190056239 - L2 LINE L2 -4 3309 3203 2503 197 14 18 chr5 13029293 13029800 -190055732 + MLT1D LTR MaLR 1 505 0 821 315 108 11 chr5 13029800 13030134 -190055398 - L2 LINE L2 -110 3203 2812 450 302 17 22 chr5 13030143 13030322 -190055210 - MER5B DNA MER1_type 0 178 1 402 338 45 13 chr5 13030322 13030349 -190055183 - L2 LINE L2 -503 2811 2787 198 0 0 0 chr5 13030349 13030371 -190055161 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 402 338 45 13 chr5 13030371 13030486 -190055046 - L2 LINE L2 -527 2787 2664 360 304 98 47 chr5 13030487 13030701 -190054831 - L2 LINE L2 -1098 2216 1992 830 309 53 25 chr5 13030729 13031127 -190054405 - LTR16A LTR ERVL -7 443 35 226 207 0 107 chr5 13031690 13031840 -190053692 + A-rich Low_complexity Low_complexity 3 136 0 2972 265 85 25 chr5 13031989 13034470 -190051062 + L1MC/D LINE L1 2663 5359 -883 234 0 0 0 chr5 13034470 13034496 -190051036 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2972 265 85 25 chr5 13034496 13034763 -190050769 + L1MC/D LINE L1 5359 5608 -634 1645 180 9 27 chr5 13034926 13035259 -190050273 - L1 LINE L1 -1977 4169 3843 1831 128 3 48 chr5 13035635 13035925 -190049607 - AluSx SINE Alu -35 277 1 24 67 0 0 chr5 13035973 13036018 -190049514 + AT_rich Low_complexity Low_complexity 1 45 0 10475 173 17 10 chr5 13036301 13038379 -190047153 + L1P LINE L1 1550 3642 -2504 648 319 63 77 chr5 13038774 13039550 -190045982 - L2 LINE L2 -128 3185 2399 401 330 135 0 chr5 13039873 13040060 -190045472 + MIR SINE MIR 40 249 -13 449 325 65 50 chr5 13040116 13040166 -190045366 - MLT1K LTR MaLR -254 334 286 1962 154 103 10 chr5 13040166 13040556 -190044976 - MSTA LTR MaLR -2 426 1 449 325 65 50 chr5 13040556 13040828 -190044704 - MLT1K LTR MaLR -302 286 7 3106 161 15 22 chr5 13041477 13042073 -190043459 - MER39B LTR ERV1 -5 648 57 750 82 0 0 chr5 13042173 13042270 -190043262 + L1PA10 LINE L1 6056 6152 -16 633 178 0 0 chr5 13042344 13042451 -190043081 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 13042525 13042553 -190042979 + AT_rich Low_complexity Low_complexity 1 28 0 362 301 44 56 chr5 13043704 13043935 -190041597 - MIR SINE MIR 0 262 36 1779 208 208 4 chr5 13044438 13044905 -190040627 - MLT1F1 LTR MaLR -1 566 5 346 333 23 34 chr5 13045569 13045746 -190039786 + HAL1 LINE L1 1116 1290 -1217 613 332 76 4 chr5 13046129 13046367 -190039165 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 13047371 13047543 -190037989 - LTR8 LTR ERV1 -9 682 510 7509 34 6 7 chr5 13047546 13049197 -190036335 - L1PA3 LINE L1 -3 6152 4505 8443 163 7 7 chr5 13049343 13050036 -190035496 + L1PA11 LINE L1 3644 4336 -1838 2826 7 0 0 chr5 13050036 13050342 -190035190 + AluY SINE Alu 1 306 -5 8443 163 7 7 chr5 13050342 13052191 -190033341 + L1PA11 LINE L1 4335 6172 -2 228 100 0 0 chr5 13053857 13053897 -190031635 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 13053896 13053921 -190031611 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3357 197 65 17 chr5 13054551 13055334 -190030198 + L1MB8 LINE L1 5352 6172 -6 217 354 42 0 chr5 13055592 13055688 -190029844 + L2 LINE L2 3173 3272 0 234 91 0 0 chr5 13056898 13056931 -190028601 + (TG)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr5 13057270 13057299 -190028233 + AT_rich Low_complexity Low_complexity 1 29 0 605 164 98 0 chr5 13058393 13058515 -190027017 - L1MB8 LINE L1 -5 6173 6040 472 161 120 16 chr5 13058610 13058802 -190026730 - L1MB8 LINE L1 -170 6008 5797 799 188 56 64 chr5 13059401 13059635 -190025897 - MER96B DNA MER1_type? -185 232 1 814 154 19 0 chr5 13060178 13060340 -190025192 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 193 303 43 99 chr5 13061119 13061281 -190024251 + L2 LINE L2 3115 3267 -5 4862 91 1 41 chr5 13061518 13062299 -190023233 + L1P LINE L1 2 751 -5395 233 219 62 0 chr5 13063085 13063149 -190022383 + L3 LINE CR1 792 859 -718 355 289 243 14 chr5 13063317 13063535 -190021997 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 13063593 13063839 -190021693 + AluY SINE Alu 55 300 -11 315 313 23 47 chr5 13063844 13063972 -190021560 + L3 LINE CR1 1383 1507 -70 7423 101 7 19 chr5 13065096 13066181 -190019351 + MER11C LTR ERVK 1 1071 0 254 302 16 0 chr5 13066253 13066316 -190019216 - MIR SINE MIR -104 104 41 954 187 34 10 chr5 13067398 13067607 -190017925 + MER61C LTR ERV1 216 429 -5 279 0 0 0 chr5 13067647 13067678 -190017854 + (CA)n Simple_repeat Simple_repeat 1 31 0 202 281 52 118 chr5 13068279 13068414 -190017118 - MIR3 SINE MIR -45 163 38 2256 105 13 7 chr5 13068550 13068855 -190016677 + AluSg SINE Alu 3 309 -1 326 315 124 41 chr5 13069148 13069415 -190016117 + L2 LINE L2 2929 3217 -96 620 334 128 17 chr5 13069487 13069704 -190015828 - L2 LINE L2 -25 3288 3097 1633 182 0 47 chr5 13069704 13070022 -190015510 + AluJo SINE Alu 1 303 -9 620 334 128 17 chr5 13070022 13070440 -190015092 - L2 LINE L2 -216 3097 2591 295 138 313 25 chr5 13070444 13070524 -190015008 + MER51A LTR ERV1 1 103 -531 * 2280 111 2 34 chr5 13070518 13070865 -190014667 + MER51B LTR ERV1 50 377 0 262 291 0 0 chr5 13070874 13070953 -190014579 - L2 LINE L2 -741 2573 2495 244 184 13 92 chr5 13070961 13071037 -190014495 - L1MA10 LINE L1 -552 5782 5713 2395 158 59 20 chr5 13071038 13071544 -190013988 + L1MA10 LINE L1 5806 6331 -3 1377 303 141 11 chr5 13071595 13072331 -190013201 - L2 LINE L2 -865 2449 1618 2647 124 11 49 chr5 13072546 13072991 -190012541 - MSTA LTR MaLR 0 428 1 1872 134 16 26 chr5 13075857 13076163 -190009369 + AluJb SINE Alu 3 305 -7 2128 92 0 3 chr5 13076355 13076659 -190008873 - AluY SINE Alu -8 303 1 487 163 43 0 chr5 13076922 13077014 -190008518 + L1PB3 LINE L1 5985 6080 -74 40 17 0 17 chr5 13077126 13077156 -190008376 + AT_rich Low_complexity Low_complexity 1 31 -26 1905 107 3 75 chr5 13077156 13077475 -190008057 - AluSx SINE Alu -16 296 1 40 17 0 17 chr5 13077475 13077502 -190008030 + AT_rich Low_complexity Low_complexity 31 57 0 1522 57 43 19 chr5 13077510 13077719 -190007813 + AluSq SINE Alu 79 292 -21 329 281 57 62 chr5 13078630 13078840 -190006692 + MIR SINE MIR 11 219 -43 288 317 14 28 chr5 13078935 13079080 -190006452 + MIR SINE MIR 85 227 -35 30027 32 13 0 chr5 13079971 13083724 -190001808 - L1P LINE L1 -733 5422 1630 572 106 0 62 chr5 13083724 13083837 -190001695 - LTR8 LTR ERV1 -176 515 410 * 887 138 0 22 chr5 13083831 13083969 -190001563 - LTR8 LTR ERV1 -556 135 1 359 129 38 53 chr5 13084163 13084286 -190001246 + MER61B LTR ERV1 2 216 -209 1110 88 0 0 chr5 13084412 13084549 -190000983 - AluSq/x SINE Alu -176 137 1 414 225 26 89 chr5 13084555 13084746 -190000786 - L1MC5 LINE L1 -180 7781 7603 301 359 21 7 chr5 13084773 13084918 -190000614 - L1M4 LINE L1 -996 5150 5004 230 208 125 0 chr5 13085090 13085162 -190000370 + L2 LINE L2 1135 1215 -2099 1652 246 107 66 chr5 13085171 13085573 -189999959 + L2 LINE L2 1326 1710 -1604 2200 113 3 0 chr5 13085573 13085873 -189999659 - AluSq SINE Alu -12 301 1 1652 246 107 66 chr5 13085873 13085964 -189999568 + L2 LINE L2 1710 1796 -1518 2124 133 3 0 chr5 13085964 13086257 -189999275 - AluSx SINE Alu -18 294 1 1652 246 107 66 chr5 13086257 13086626 -189998906 + L2 LINE L2 1796 2224 -1090 1759 118 0 0 chr5 13086634 13086872 -189998660 + AluSx SINE Alu 56 293 -19 1580 219 6 18 chr5 13086910 13087239 -189998293 + MER82 DNA MER2_type 37 361 -292 2481 61 0 19 chr5 13087916 13088227 -189997305 + AluY SINE Alu 1 305 -6 569 249 142 20 chr5 13088410 13088607 -189996925 + MIR SINE MIR 3 223 -39 968 180 135 61 chr5 13088616 13088683 -189996849 - MLT1D LTR MaLR -2 503 442 2329 94 3 3 chr5 13088683 13088990 -189996542 + AluSp SINE Alu 1 307 -6 968 180 135 61 chr5 13088990 13089280 -189996252 - MLT1D LTR MaLR -63 442 95 2866 112 30 112 chr5 13089705 13090278 -189995254 - Tigger1 DNA MER2_type 0 2418 1893 1342 177 27 10 chr5 13090792 13091209 -189994323 + LTR54 LTR ERV1 1 510 0 288 0 0 0 chr5 13091478 13091510 -189994022 + (TC)n Simple_repeat Simple_repeat 2 33 0 333 0 0 0 chr5 13094027 13094064 -189991468 + (TG)n Simple_repeat Simple_repeat 2 38 0 586 193 56 43 chr5 13095356 13095517 -189990015 - LTR23 LTR ERV1 0 437 275 1205 167 5 33 chr5 13095868 13095953 -189989579 - MER3 DNA MER1_type 0 209 123 1884 115 0 0 chr5 13095953 13096197 -189989335 + AluSg SINE Alu 52 295 -15 1205 167 5 33 chr5 13096197 13096326 -189989206 - MER3 DNA MER1_type -86 123 1 458 181 96 50 chr5 13097040 13097272 -189988260 - LTR48 LTR ERV1 -48 739 300 420 141 94 0 chr5 13097290 13097375 -189988157 - LTR49 LTR ERV1 -349 246 154 3835 206 26 30 chr5 13097494 13098924 -189986608 + L1MA9 LINE L1 4361 5788 -524 241 191 16 48 chr5 13098947 13099010 -189986522 - L1M2 LINE L1 -512 5788 5728 2311 196 46 24 chr5 13099034 13099331 -189986201 + L1MA9 LINE L1 5776 6091 -221 1975 81 0 8 chr5 13099331 13099629 -189985903 - AluY SINE Alu 0 333 38 2311 196 46 24 chr5 13099629 13099831 -189985701 + L1MA9 LINE L1 6091 6287 -25 697 295 33 26 chr5 13099865 13100136 -189985396 + MLT1K LTR MaLR 307 579 -9 331 241 35 23 chr5 13101747 13101834 -189983698 - L2 LINE L2 -16 3297 3210 354 236 50 36 chr5 13101882 13102022 -189983510 + L1MC4 LINE L1 7900 8041 -1 2481 46 19 10 chr5 13102336 13102643 -189982889 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 13102735 13102758 -189982774 + (A)n Simple_repeat Simple_repeat 1 23 0 279 0 0 0 chr5 13103180 13103211 -189982321 + (TTA)n Simple_repeat Simple_repeat 3 33 0 306 30 0 0 chr5 13103211 13103244 -189982288 - L1PA6 LINE L1 -18 6136 6104 1457 229 66 92 chr5 13104140 13104704 -189980828 - MLT1E2 LTR MaLR -2 624 76 302 281 118 30 chr5 13104611 13104746 -189980786 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 13105042 13105081 -189980451 + (TA)n Simple_repeat Simple_repeat 2 40 0 2227 115 0 16 chr5 13105081 13105394 -189980138 - AluSx SINE Alu -4 308 1 497 273 32 7 chr5 13105838 13105992 -189979540 + LTR67 LTR ERVL 400 557 0 1441 179 3 102 chr5 13106350 13106674 -189978858 + AluJo SINE Alu 1 292 -20 1301 136 19 0 chr5 13106788 13107002 -189978530 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 13107205 13107238 -189978294 + (TG)n Simple_repeat Simple_repeat 1 33 0 1832 132 13 55 chr5 13107469 13107780 -189977752 - AluSq SINE Alu -14 299 2 2308 100 3 0 chr5 13107793 13108094 -189977438 - AluSc SINE Alu -7 302 1 2065 136 3 7 chr5 13108122 13108432 -189977100 - AluSg1 SINE Alu 0 309 1 235 311 41 33 chr5 13108511 13108633 -189976899 + LTR67 LTR ERVL 421 543 -14 376 295 54 27 chr5 13110209 13110358 -189975174 - MIR SINE MIR -97 165 13 2228 105 0 10 chr5 13111337 13111632 -189973900 + AluSg SINE Alu 3 294 -16 2375 75 0 31 chr5 13111634 13111955 -189973577 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 13111965 13112006 -189973526 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 13112005 13112029 -189973503 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 601 264 37 12 chr5 13112404 13112567 -189972965 - MER5A DNA MER1_type -7 182 16 317 167 56 158 chr5 13112619 13112834 -189972698 + L1M4 LINE L1 4969 5161 -985 1900 109 21 0 chr5 13112835 13113118 -189972414 - AluSq SINE Alu -15 298 10 295 271 21 49 chr5 13113442 13113586 -189971946 + C-rich Low_complexity Low_complexity 3 142 0 273 302 9 35 chr5 13114903 13115019 -189970513 + C-rich Low_complexity Low_complexity 3 115 0 552 168 84 8 chr5 13115280 13115411 -189970121 - LTR37A LTR ERV1 0 426 286 2215 112 10 0 chr5 13115513 13115817 -189969715 + AluSx SINE Alu 5 311 -1 426 190 229 45 chr5 13116415 13116594 -189968938 + LTR37A LTR ERV1 8 219 -207 708 162 0 0 chr5 13116609 13116708 -189968824 - AluJ/FLAM SINE Alu -212 100 2 3291 172 54 72 chr5 13116755 13117006 -189968526 - MER72 LTR ERV1 0 722 468 1592 172 0 34 chr5 13117006 13117302 -189968230 - AluJo SINE Alu -26 286 1 3291 172 54 72 chr5 13117302 13117771 -189967761 - MER72 LTR ERV1 -254 468 15 330 277 27 20 chr5 13117797 13117945 -189967587 + LTR37A LTR ERV1 278 426 0 850 110 16 8 chr5 13117956 13118083 -189967449 - MER4D LTR ERV1 0 903 776 1067 230 103 75 chr5 13118183 13118486 -189967046 - MLT1E2 LTR MaLR -77 549 224 1947 131 30 0 chr5 13118486 13118784 -189966748 - AluSx SINE Alu -5 307 1 1067 230 103 75 chr5 13118784 13119015 -189966517 - MLT1E2 LTR MaLR -402 224 1 419 136 0 0 chr5 13119302 13119361 -189966171 - AluJo SINE Alu -16 296 238 3761 133 49 30 chr5 13119361 13119917 -189965615 + MER50 LTR ERV1 1 574 -160 2256 104 0 7 chr5 13119917 13120225 -189965307 - AluSx SINE Alu -6 306 1 3761 133 49 30 chr5 13120225 13120366 -189965166 + MER50 LTR ERV1 574 711 -23 1357 168 16 29 chr5 13120367 13120611 -189964921 - AluJo SINE Alu -71 241 1 1117 158 254 7 chr5 13120626 13120905 -189964627 - Charlie1 DNA MER1_type -369 2392 2045 1602 168 28 7 chr5 13120906 13121191 -189964341 - AluJo SINE Alu -21 291 1 765 222 81 0 chr5 13121217 13121402 -189964130 - Charlie1a DNA MER1_type -1251 204 5 1256 173 140 0 chr5 13121808 13122080 -189963452 - MER2 DNA MER2_type -26 319 10 349 248 153 38 chr5 13122909 13123066 -189962466 + MIR SINE MIR 1 175 -87 2061 107 35 10 chr5 13124420 13124709 -189960823 - AluSq SINE Alu -17 296 1 863 111 8 0 chr5 13125029 13125146 -189960386 + MLT1B LTR MaLR 273 390 0 * 2111 157 11 11 chr5 13125146 13125494 -189960038 - MLT2C1 LTR ERVL -49 348 1 635 190 129 95 chr5 13125826 13126058 -189959474 - MIR SINE MIR -13 249 10 1969 156 3 0 chr5 13126547 13126842 -189958690 - AluJb SINE Alu -16 296 1 813 159 0 57 chr5 13127301 13127458 -189958074 + AluJo SINE Alu 11 158 -154 1930 116 0 48 chr5 13127486 13127797 -189957735 + AluSx SINE Alu 1 296 -16 2023 138 7 0 chr5 13128184 13128480 -189957052 - AluSx SINE Alu -12 300 3 709 215 99 25 chr5 13128551 13128802 -189956730 + MLT1C LTR MaLR 39 344 -123 2142 117 117 30 chr5 13128802 13129154 -189956378 + MSTA LTR MaLR 1 392 -36 2254 107 0 29 chr5 13129154 13129463 -189956069 - AluSq SINE Alu -13 300 1 2142 117 117 30 chr5 13129463 13129504 -189956028 + MSTA LTR MaLR 392 428 0 709 215 99 25 chr5 13129504 13129638 -189955894 + MLT1C LTR MaLR 344 467 0 2059 110 0 37 chr5 13129710 13130009 -189955523 + AluSx SINE Alu 1 288 -24 4004 166 11 60 chr5 13130037 13130797 -189954735 + MER72 LTR ERV1 1 722 0 365 223 93 39 chr5 13131622 13131817 -189953715 + L1MC4a LINE L1 7193 7414 -394 275 156 0 0 chr5 13131817 13131862 -189953670 - MLT1F1 LTR MaLR 0 567 523 813 199 76 0 chr5 13131889 13132060 -189953472 - MLT1F1 LTR MaLR -362 205 22 1678 126 17 55 chr5 13132060 13132353 -189953179 + AluSx SINE Alu 1 282 -30 240 232 14 14 chr5 13132354 13132423 -189953109 + GA-rich Low_complexity Low_complexity 1 69 0 530 176 15 15 chr5 13132619 13132755 -189952777 + GA-rich Low_complexity Low_complexity 1 136 0 930 106 12 12 chr5 13132761 13132921 -189952611 + (GGAA)n Simple_repeat Simple_repeat 3 162 0 2397 82 0 25 chr5 13133012 13133331 -189952201 + AluSx SINE Alu 2 312 0 1877 183 64 43 chr5 13133332 13133583 -189951949 - MER74A LTR ERVL -111 447 203 1964 146 58 18 chr5 13133583 13133913 -189951619 + MER61A LTR ERV1 1 343 0 1877 183 64 43 chr5 13133913 13134079 -189951453 - MER74A LTR ERVL -355 203 18 2246 131 3 6 chr5 13134079 13134392 -189951140 + AluSx SINE Alu 1 312 0 1877 183 64 43 chr5 13134392 13134411 -189951121 - MER74A LTR ERVL -540 18 1 1276 213 88 29 chr5 13134411 13134795 -189950737 - MLT1F1 LTR MaLR -41 526 124 2338 149 81 2 chr5 13134795 13135192 -189950340 - MSTC LTR MaLR 0 428 1 1276 213 88 29 chr5 13135192 13135231 -189950301 - MLT1F1 LTR MaLR -443 124 89 454 241 121 7 chr5 13135335 13135476 -189950056 - MSTC-int LTR MaLR 0 1371 1215 1701 142 0 73 chr5 13135690 13135992 -189949540 + AluJb SINE Alu 1 280 -32 303 341 121 0 chr5 13136022 13136195 -189949337 - MSTC-int LTR MaLR -486 885 692 937 127 20 76 chr5 13136434 13136631 -189948901 + MSTB LTR MaLR 1 186 -240 1430 179 12 4 chr5 13136648 13136894 -189948638 + AluJb SINE Alu 22 269 -43 1515 160 8 34 chr5 13136903 13137165 -189948367 - AluJo SINE Alu -57 255 1 276 125 0 0 chr5 13137165 13137205 -189948327 + MSTA LTR MaLR 389 428 0 622 292 68 13 chr5 13137205 13137513 -189948019 - MSTC-int LTR MaLR -770 601 277 850 196 37 0 chr5 13137528 13137691 -189947841 + FRAM SINE Alu 1 169 -7 259 239 146 15 chr5 13137701 13137831 -189947701 - MSTC-int LTR MaLR -1221 150 4 993 259 105 51 chr5 13137843 13138154 -189947378 - MLT1F LTR MaLR 0 542 249 234 81 0 0 chr5 13138154 13138191 -189947341 + (CA)n Simple_repeat Simple_repeat 2 38 0 993 259 105 51 chr5 13138191 13138267 -189947265 - MLT1F LTR MaLR -293 249 179 2262 104 50 50 chr5 13138267 13138365 -189947167 + THE1B LTR MaLR 1 98 -266 2274 112 0 3 chr5 13138365 13138661 -189946871 - AluSq SINE Alu -18 295 1 2262 104 50 50 chr5 13138661 13138926 -189946606 + THE1B LTR MaLR 97 364 0 993 259 105 51 chr5 13138926 13139051 -189946481 - MLT1F LTR MaLR -363 179 1 1182 134 31 76 chr5 13139980 13140203 -189945329 + AluJb SINE Alu 86 298 -14 1310 131 149 62 chr5 13140408 13140446 -189945086 - MSTC LTR MaLR 0 365 332 2123 117 0 0 chr5 13140446 13140762 -189944770 + AluSx SINE Alu 1 316 0 1310 131 149 62 chr5 13140762 13141058 -189944474 - MSTC LTR MaLR -33 332 1 454 208 10 10 chr5 13141100 13141196 -189944336 + MLT2F LTR ERVL 1 96 -567 2332 105 0 22 chr5 13141323 13141638 -189943894 + AluSx SINE Alu 1 308 -4 913 162 7 19 chr5 13141643 13141835 -189943697 + FRAM SINE Alu 1 176 0 313 207 50 83 chr5 13142080 13142201 -189943331 + L1 LINE L1 3083 3199 -2947 654 179 87 22 chr5 13142362 13142546 -189942986 - L1PB3 LINE L1 -274 5880 5685 250 232 295 11 chr5 13143572 13143667 -189941865 + MIR SINE MIR 32 153 -55 2255 125 0 3 chr5 13143747 13144052 -189941480 + AluJb SINE Alu 9 312 0 1905 169 3 13 chr5 13144140 13144271 -189941261 + AluJo SINE Alu 1 132 -180 2296 105 7 0 chr5 13144271 13144567 -189940965 + AluSg SINE Alu 1 298 -12 1905 169 3 13 chr5 13144567 13144749 -189940783 + AluJo SINE Alu 132 311 -1 2193 144 34 3 chr5 13144953 13145308 -189940224 - MER47A DNA MER2_type 0 366 1 1911 120 53 3 chr5 13145959 13146242 -189939290 - AluSx SINE Alu -15 297 1 2404 84 0 3 chr5 13146630 13146926 -189938606 - AluSg SINE Alu -13 297 3 1962 152 13 3 chr5 13146934 13147237 -189938295 - AluJb SINE Alu -6 306 1 2335 108 0 0 chr5 13147554 13147860 -189937672 - AluSx SINE Alu -6 306 1 1669 184 3 3 chr5 13148220 13148502 -189937030 + AluJo SINE Alu 1 282 -30 2138 112 0 7 chr5 13148668 13148964 -189936568 + AluSx SINE Alu 1 294 -18 2022 146 0 10 chr5 13149505 13149830 -189935702 + AluSx SINE Alu 1 312 0 2366 84 7 3 chr5 13149904 13150200 -189935332 + AluSx SINE Alu 1 297 -15 4625 161 48 9 chr5 13150701 13151563 -189933969 + MER54A LTR ERVL 1 895 -6 231 217 0 0 chr5 13151567 13151613 -189933919 + MIR SINE MIR 102 147 -115 2262 183 56 41 chr5 13152096 13152351 -189933181 - Charlie5 DNA MER1_type -30 2594 2344 1951 128 13 13 chr5 13152351 13152655 -189932877 + AluSx SINE Alu 1 304 -8 2262 183 56 41 chr5 13152655 13153010 -189932522 - Charlie5 DNA MER1_type -280 2344 1975 2304 99 10 0 chr5 13153016 13153318 -189932214 - AluSx SINE Alu -7 305 1 337 261 45 9 chr5 13153320 13153431 -189932101 - Charlie5 DNA MER1_type -2464 148 34 410 180 72 18 chr5 13153533 13153644 -189931888 + LTR34 LTR ERV1 1 117 -547 926 215 96 96 chr5 13153722 13154190 -189931342 + LTR34 LTR ERV1 136 695 -4 2791 103 0 8 chr5 13154722 13155100 -189930432 + THE1C LTR MaLR 1 375 0 263 238 60 24 chr5 13155286 13155370 -189930162 - MLT1L LTR MaLR -2 613 527 1651 135 31 0 chr5 13155963 13156223 -189929309 + MER50 LTR ERV1 1 268 -466 704 78 0 0 chr5 13156567 13156657 -189928875 + THE1C LTR MaLR 1 90 -285 1337 171 89 0 chr5 13156668 13156926 -189928606 + MER50 LTR ERV1 431 711 -23 1859 173 0 16 chr5 13157399 13157711 -189927821 - AluJb SINE Alu -5 307 1 307 342 45 42 chr5 13157812 13158052 -189927480 - MLT1I LTR MaLR -52 357 114 3173 122 75 58 chr5 13158052 13158219 -189927313 - MER39B LTR ERV1 -1 652 489 1764 155 30 0 chr5 13158219 13158490 -189927042 - AluJo SINE Alu -22 290 12 3173 122 75 58 chr5 13158490 13158959 -189926573 - MER39B LTR ERV1 -164 489 5 307 342 45 42 chr5 13158959 13159031 -189926501 - MLT1I LTR MaLR -295 114 44 660 170 78 7 chr5 13159180 13159321 -189926211 - MLT1E2 LTR MaLR -7 619 469 338 224 0 0 chr5 13159456 13159514 -189926018 - AluJ/FLAM SINE Alu -244 58 1 352 188 24 71 chr5 13160413 13160498 -189925034 + L2 LINE L2 3229 3309 -4 746 246 173 24 chr5 13160618 13161028 -189924504 - L1MC4 LINE L1 -89 7953 7483 235 267 133 0 chr5 13162009 13162099 -189923433 - MIR SINE MIR -48 214 113 241 167 0 0 chr5 13162142 13162184 -189923348 + MER2 DNA MER2_type 1 42 -303 445 202 0 0 chr5 13162185 13162269 -189923263 + MER2 DNA MER2_type 1 84 -261 675 208 8 0 chr5 13162401 13162531 -189923001 + FLAM_A SINE Alu 1 131 -2 1971 118 10 20 chr5 13162611 13162908 -189922624 - AluSx SINE Alu -18 294 1 24 0 0 0 chr5 13163006 13163030 -189922502 + AT_rich Low_complexity Low_complexity 1 24 0 1319 116 0 0 chr5 13163320 13163501 -189922031 - AluSg/x SINE Alu -12 298 118 270 185 19 0 chr5 13163820 13163874 -189921658 + MER20 DNA MER1_type 159 213 -6 187 309 112 39 chr5 13164207 13164385 -189921147 - MIR SINE MIR -10 252 62 210 260 26 39 chr5 13164809 13164886 -189920646 + L2 LINE L2 2905 2980 -333 252 0 0 0 chr5 13166017 13166045 -189919487 + (T)n Simple_repeat Simple_repeat 1 28 0 609 243 47 42 chr5 13166352 13166566 -189918966 + MIR SINE MIR 18 232 -30 211 200 40 0 chr5 13166578 13166628 -189918904 - MIR SINE MIR -144 118 67 1706 117 58 21 chr5 13166660 13166951 -189918581 - AluSx SINE Alu -9 303 2 858 120 15 0 chr5 13167249 13167382 -189918150 + FRAM SINE Alu 18 152 -24 1704 147 4 19 chr5 13168326 13168584 -189916948 + AluJo SINE Alu 34 287 -25 1686 181 29 40 chr5 13169282 13169462 -189916070 + L1MB8 LINE L1 5762 5943 -235 2055 117 3 43 chr5 13169462 13169786 -189915746 - AluSx SINE Alu -1 311 1 1686 181 29 40 chr5 13169786 13170026 -189915506 + L1MB8 LINE L1 5943 6177 -1 1922 165 3 3 chr5 13170172 13170469 -189915063 - AluJb SINE Alu -15 297 1 2390 106 0 3 chr5 13170483 13170795 -189914737 - AluY SINE Alu 0 311 1 186 260 205 24 chr5 13170813 13170940 -189914592 - MIR SINE MIR -109 153 4 2060 142 13 7 chr5 13171004 13171306 -189914226 - AluJo SINE Alu -8 304 1 6686 134 40 10 chr5 13171349 13171388 -189914144 + Tigger1 DNA MER2_type 2 38 -2380 700 204 0 23 chr5 13171388 13171520 -189914012 - FLAM_A SINE Alu -1 132 4 6686 134 40 10 chr5 13171520 13172437 -189913095 + Tigger1 DNA MER2_type 38 999 -1419 2343 91 24 0 chr5 13172437 13172733 -189912799 - AluSg SINE Alu -7 303 1 6686 134 40 10 chr5 13172733 13172894 -189912638 + Tigger1 DNA MER2_type 999 1154 -1264 1253 104 11 16 chr5 13173009 13173191 -189912341 - AluJb SINE Alu -131 181 1 2458 74 0 3 chr5 13173258 13173555 -189911977 - AluY SINE Alu -15 296 1 2370 95 3 0 chr5 13173555 13173851 -189911681 - AluSx SINE Alu -15 297 1 599 162 0 0 chr5 13173946 13174051 -189911481 - FRAM SINE Alu -8 168 64 2321 110 3 3 chr5 13174148 13174458 -189911074 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 13174458 13174479 -189911053 + AT_rich Low_complexity Low_complexity 1 21 0 926 229 85 98 chr5 13174485 13174614 -189910918 + L1ME1 LINE L1 5692 5821 -345 2422 88 0 28 chr5 13174614 13174933 -189910599 - AluSg SINE Alu 0 310 1 926 229 85 98 chr5 13174933 13175252 -189910280 + L1ME1 LINE L1 5821 6134 -32 705 151 19 0 chr5 13175253 13175359 -189910173 + FLAM_C SINE Alu 2 109 -34 1766 171 0 16 chr5 13175431 13175741 -189909791 - AluJo SINE Alu 0 312 8 1693 132 4 0 chr5 13176204 13176439 -189909093 - AluSq SINE Alu -14 299 64 851 242 30 36 chr5 13176723 13177117 -189908415 - MLT1H LTR MaLR 0 549 43 204 217 0 0 chr5 13177849 13177895 -189907637 + L2 LINE L2 2911 2956 -316 233 333 0 0 chr5 13179041 13179113 -189906419 + L2 LINE L2 2902 2973 -299 2125 196 52 5 chr5 13179514 13179958 -189905574 + L1MB7 LINE L1 5579 6043 -141 1979 101 7 35 chr5 13180110 13180419 -189905113 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 13181538 13181581 -189903951 + AT_rich Low_complexity Low_complexity 1 43 0 1903 186 38 55 chr5 13181581 13181704 -189903828 + MLT1D LTR MaLR 1 125 -380 2153 101 10 10 chr5 13181704 13181724 -189903808 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 13181724 13181745 -189903787 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2153 101 10 10 chr5 13181745 13182022 -189903510 - AluSx SINE Alu -31 281 2 1903 186 38 55 chr5 13182022 13182404 -189903128 + MLT1D LTR MaLR 125 497 -8 908 242 54 0 chr5 13182588 13182811 -189902721 + L1MC4 LINE L1 6800 7034 -1008 1234 156 0 0 chr5 13182824 13182997 -189902535 - AluSq SINE Alu -140 173 1 1924 226 66 20 chr5 13183030 13183623 -189901909 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 13183641 13183666 -189901866 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 276 227 93 0 chr5 13183669 13183744 -189901788 + L1MB4 LINE L1 5812 5893 -278 1226 176 146 23 chr5 13183744 13184005 -189901527 + AluSg1 SINE Alu 2 294 -15 2388 104 0 0 chr5 13184007 13184314 -189901218 + AluSx SINE Alu 3 309 -3 1408 160 73 7 chr5 13184323 13184611 -189900921 + L1MB4 LINE L1 5873 6179 -1 1230 167 32 104 chr5 13184653 13184760 -189900772 + L1MC4 LINE L1 6210 6323 -1719 848 65 28 0 chr5 13184760 13184867 -189900665 + HY1 scRNA scRNA 2 111 -1 1230 167 32 104 chr5 13184867 13184880 -189900652 + L1MC4 LINE L1 6323 6335 -1707 207 114 0 0 chr5 13184880 13184915 -189900617 + (TG)n Simple_repeat Simple_repeat 2 36 0 1230 167 32 104 chr5 13184915 13184931 -189900601 + L1MC4 LINE L1 6335 6351 -1691 2428 99 0 0 chr5 13184931 13185234 -189900298 + AluSx SINE Alu 1 303 -9 1230 167 32 104 chr5 13185234 13185458 -189900074 + L1MC4 LINE L1 6351 8028 -14 3319 73 22 44 chr5 13185754 13186208 -189899324 + MLT2A1 LTR ERVL 1 444 0 821 235 105 17 chr5 13186303 13186597 -189898935 + L1ME3 LINE L1 5843 6162 0 1827 195 40 2 chr5 13187255 13187696 -189897836 - MER89 LTR ERV1 0 559 2 517 202 176 8 chr5 13187851 13187970 -189897562 + MER2 DNA MER2_type 206 344 -1 243 143 71 7 chr5 13188687 13188841 -189896691 + (TA)n Simple_repeat Simple_repeat 2 165 0 306 215 107 50 chr5 13188850 13188971 -189896561 + L1MC4 LINE L1 7910 8037 -5 350 305 48 0 chr5 13189335 13189440 -189896092 - L2 LINE L2 -2 3311 3202 371 224 135 13 chr5 13189515 13189671 -189895861 - Charlie2 DNA MER1_type -17 2845 2671 288 0 0 0 chr5 13189784 13189816 -189895716 + (CA)n Simple_repeat Simple_repeat 1 32 0 382 371 45 0 chr5 13189872 13190050 -189895482 - L1MEd LINE L1 -5482 637 452 2007 121 24 13 chr5 13190342 13190640 -189894892 + AluSx SINE Alu 1 301 -11 760 218 175 26 chr5 13191025 13191333 -189894199 - L1MC4 LINE L1 -5 8037 7684 2325 99 0 0 chr5 13191336 13191629 -189893903 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 13191808 13191844 -189893688 + (CA)n Simple_repeat Simple_repeat 2 37 0 1555 150 59 28 chr5 13191892 13192014 -189893518 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 13192014 13192038 -189893494 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1555 150 59 28 chr5 13192038 13192201 -189893331 + AluJb SINE Alu 118 295 -17 269 268 65 89 chr5 13192378 13192624 -189892908 + MLT1K LTR MaLR 189 428 -160 220 192 0 39 chr5 13192773 13192825 -189892707 + MIR SINE MIR 213 262 0 880 165 0 122 chr5 13193284 13193472 -189892060 + FRAM SINE Alu 1 165 -1 193 93 0 47 chr5 13194682 13194725 -189890807 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 13195045 13195110 -189890422 + GC_rich Low_complexity Low_complexity 1 65 0 432 292 99 5 chr5 13195935 13196127 -189889405 - MIR SINE MIR -52 210 1 635 280 101 5 chr5 13196565 13196783 -189888749 - MIR SINE MIR -6 256 18 572 0 15 0 chr5 13197283 13197351 -189888181 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 2114 117 0 0 chr5 13197353 13197635 -189887897 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 13197647 13197669 -189887863 + AT_rich Low_complexity Low_complexity 1 22 0 205 237 136 0 chr5 13198031 13198090 -189887442 - MIR3 SINE MIR -21 187 121 21 0 0 0 chr5 13198153 13198174 -189887358 + AT_rich Low_complexity Low_complexity 1 21 0 871 215 58 174 chr5 13198661 13198905 -189886627 - L2 LINE L2 0 3313 3042 666 39 0 0 chr5 13198905 13198983 -189886549 - AluY SINE Alu -11 301 224 871 215 58 174 chr5 13198983 13199325 -189886207 - L2 LINE L2 -271 3042 2709 1196 172 43 0 chr5 13199331 13199538 -189885994 - MER2 DNA MER2_type 0 345 130 4034 133 82 20 chr5 13199538 13200244 -189885288 + Tigger2 DNA MER2_type 1 750 -1968 286 121 176 11 chr5 13200289 13200380 -189885152 + Tigger2 DNA MER2_type 2461 2566 -152 856 167 92 17 chr5 13200432 13200606 -189884926 - Tigger2 DNA MER2_type -2526 192 6 273 163 0 0 chr5 13200606 13200655 -189884877 + MER2 DNA MER2_type 128 176 -169 * 365 112 19 149 chr5 13200636 13200661 -189884871 + Tigger2 DNA MER2_type 2532 2559 -159 2184 92 0 3 chr5 13200661 13200953 -189884579 + AluSx SINE Alu 1 291 -21 365 112 19 149 chr5 13200953 13201034 -189884498 + Tigger2 DNA MER2_type 2559 2624 -94 2414 72 3 0 chr5 13201209 13201502 -189884030 - AluSp SINE Alu -19 294 1 873 171 126 31 chr5 13201845 13202289 -189883243 - Charlie1 DNA MER1_type -1 2760 2186 3757 201 89 10 chr5 13202297 13203556 -189881976 + L1MB8 LINE L1 4810 6174 -4 780 181 7 34 chr5 13203554 13203703 -189881829 + L1ME LINE L1 5421 5565 -601 * 363 236 172 19 chr5 13203879 13203957 -189881575 - LTR41 LTR ERVL -592 181 116 180 0 0 0 chr5 13203957 13203977 -189881555 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 363 236 172 19 chr5 13203977 13204055 -189881477 - LTR41 LTR ERVL -657 116 1 232 228 69 59 chr5 13204237 13204249 -189881283 - LTR33A LTR ERVL -363 160 150 2327 92 3 0 chr5 13204249 13204542 -189880990 - AluSq SINE Alu -19 294 1 232 228 69 59 chr5 13204542 13204630 -189880902 - LTR33A LTR ERVL -373 150 59 2211 76 32 0 chr5 13204733 13205031 -189880501 - AluSp SINE Alu 0 307 1 1714 146 84 0 chr5 13205386 13205661 -189879871 - AluSx SINE Alu -14 298 1 265 111 0 0 chr5 13205867 13205903 -189879629 + L1MC3 LINE L1 7238 7273 -512 482 95 0 0 chr5 13205907 13205970 -189879562 - LTR3b LTR ERVK 0 500 438 2003 162 51 56 chr5 13205970 13206401 -189879131 - LTR3 LTR ERVK 0 429 1 2218 158 113 13 chr5 13206401 13206431 -189879101 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 13206431 13206452 -189879080 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 2218 158 113 13 chr5 13206452 13206882 -189878650 + L1MC3 LINE L1 7297 7777 -8 975 279 54 56 chr5 13207699 13207789 -189877743 - MLT1I LTR MaLR 0 409 320 1643 139 12 89 chr5 13207789 13208008 -189877524 + AluJo SINE Alu 1 189 -123 1845 139 30 20 chr5 13208008 13208311 -189877221 - AluSx SINE Alu -6 306 1 1643 139 12 89 chr5 13208311 13208415 -189877117 + AluJo SINE Alu 189 299 -13 975 279 54 56 chr5 13208415 13208732 -189876800 - MLT1I LTR MaLR -89 320 3 2101 195 64 50 chr5 13208927 13209486 -189876046 - L1ME1 LINE L1 -3 6163 5597 1910 155 3 10 chr5 13209534 13209844 -189875688 - AluJo SINE Alu -3 309 2 629 120 56 9 chr5 13209868 13209976 -189875556 - L1MB3 LINE L1 -4 6179 6067 242 192 0 19 chr5 13210149 13210201 -189875331 + L1M LINE L1 5310 5360 -802 222 280 220 38 chr5 13210649 13210781 -189874751 + MIR SINE MIR 82 237 -25 2316 99 74 42 chr5 13210781 13211134 -189874398 - THE1B LTR MaLR 0 364 1 763 252 52 0 chr5 13211305 13211460 -189874072 + AluJo SINE Alu 13 175 -137 888 201 99 11 chr5 13212084 13212347 -189873185 - Charlie1b DNA MER1_type -129 394 109 917 178 6 12 chr5 13212358 13212521 -189873011 + FRAM SINE Alu 1 162 -14 2851 155 18 26 chr5 13214419 13215027 -189870505 + pTR5 LTR ERV1 742 1344 -1094 4551 124 15 126 chr5 13215043 13215967 -189869565 + LTR12 LTR ERV1 5 826 0 769 231 61 47 chr5 13217662 13217874 -189867658 - MIR SINE MIR 0 262 48 684 184 56 90 chr5 13218582 13218848 -189866684 - L1MC5 LINE L1 -94 7867 7611 2417 64 0 20 chr5 13218905 13219203 -189866329 - AluY SINE Alu -18 293 2 24 0 0 0 chr5 13219207 13219231 -189866301 + AT_rich Low_complexity Low_complexity 1 24 0 764 188 0 0 chr5 13219231 13219348 -189866184 - FLAM_C SINE Alu -25 118 2 333 0 0 0 chr5 13219599 13219636 -189865896 + (TG)n Simple_repeat Simple_repeat 2 38 0 2205 117 0 3 chr5 13220087 13220386 -189865146 + AluSx SINE Alu 1 298 -14 8979 73 12 1 chr5 13220513 13221703 -189863829 - L1P LINE L1 -928 5218 4016 22 70 0 0 chr5 13222241 13222284 -189863248 + AT_rich Low_complexity Low_complexity 1 43 0 378 306 50 19 chr5 13222302 13222462 -189863070 - L1ME4a LINE L1 -26 6095 5931 2386 246 49 15 chr5 13222917 13223534 -189861998 - L1MEc LINE L1 -5722 674 37 2668 184 30 18 chr5 13224073 13224675 -189860857 - L1M4 LINE L1 -812 5334 4726 411 368 149 13 chr5 13224734 13224962 -189860570 + L2 LINE L2 2999 3257 -15 647 178 118 0 chr5 13225482 13225617 -189859915 + L1MC3 LINE L1 7634 7784 -1 394 247 37 117 chr5 13225624 13225924 -189859608 - L1ME4a LINE L1 -16 6105 5830 629 72 0 0 chr5 13225927 13226010 -189859522 - Alu SINE Alu -4 306 224 1032 147 0 0 chr5 13226010 13226160 -189859372 - AluSq SINE Alu -160 153 4 323 262 68 0 chr5 13226170 13226273 -189859259 - L1ME4a LINE L1 -2005 5803 5694 2508 54 0 0 chr5 13226275 13226573 -189858959 - AluY SINE Alu -13 298 1 246 347 47 2 chr5 13227131 13227274 -189858258 + MIR SINE MIR 9 155 -66 204 163 0 0 chr5 13228463 13228506 -189857026 + (TATG)n Simple_repeat Simple_repeat 2 44 0 354 226 32 40 chr5 13228549 13228673 -189856859 + L1M4 LINE L1 4696 4818 -1328 2687 116 11 24 chr5 13228791 13229171 -189856361 + THE1C LTR MaLR 1 375 0 275 299 20 20 chr5 13229248 13229395 -189856137 + L1M4 LINE L1 4466 4612 -1534 1412 134 20 136 chr5 13229927 13230326 -189855206 + Tigger5 DNA MER2_type 11 2322 -1 483 262 6 98 chr5 13230326 13230562 -189854970 + L1MC4 LINE L1 7040 7252 -733 1285 243 83 98 chr5 13230564 13231145 -189854387 - MLT1G LTR MaLR -3 587 16 275 345 36 24 chr5 13231166 13231334 -189854198 + L1MC4 LINE L1 7261 7430 -612 1560 170 5 0 chr5 13231344 13231627 -189853905 + MER90 LTR ERV1 1 325 -289 2396 51 7 0 chr5 13231893 13232188 -189853344 + AluY SINE Alu 1 297 -14 210 224 0 0 chr5 13232461 13232510 -189853022 + CT-rich Low_complexity Low_complexity 3 51 0 252 0 0 0 chr5 13232684 13232712 -189852820 + (A)n Simple_repeat Simple_repeat 1 28 0 1804 174 3 3 chr5 13232716 13233021 -189852511 + AluJo SINE Alu 1 305 -7 1705 101 5 0 chr5 13234447 13234665 -189850867 + AluSx SINE Alu 1 219 -93 1956 170 60 0 chr5 13235096 13235414 -189850118 + MER1B DNA MER1_type 1 337 0 1916 140 0 0 chr5 13235565 13235843 -189849689 - AluSg SINE Alu -8 302 25 40 21 0 0 chr5 13236519 13236566 -189848966 + AT_rich Low_complexity Low_complexity 1 47 0 2302 79 0 36 chr5 13236850 13237154 -189848378 + AluSp SINE Alu 1 293 -20 1919 173 0 0 chr5 13237717 13238017 -189847515 - AluJb SINE Alu -12 300 1 940 95 0 4 chr5 13239410 13239631 -189845901 + AluSg SINE Alu 2 300 -12 2120 134 3 0 chr5 13239692 13239991 -189845541 + AluSx SINE Alu 1 300 -12 373 320 114 7 chr5 13240622 13240894 -189844638 + HAL1 LINE L1 1463 1763 -744 790 228 147 75 chr5 13241129 13241646 -189843886 + L1ME3 LINE L1 4820 5368 -797 431 309 0 0 chr5 13241647 13241757 -189843775 - MER8 DNA MER2_type -127 112 3 2367 242 111 12 chr5 13241757 13242480 -189843052 + L1ME3 LINE L1 5367 6160 -2 332 292 225 15 chr5 13242688 13243017 -189842515 + L1M4 LINE L1 2217 2614 -3532 523 219 8 17 chr5 13243230 13243349 -189842183 - FLAM_C SINE Alu -21 122 5 1167 277 78 10 chr5 13243512 13244097 -189841435 - L2 LINE L2 -204 3109 2475 597 263 56 9 chr5 13244097 13244310 -189841222 - L2 LINE L2 -1327 1987 1765 245 254 83 55 chr5 13246018 13246199 -189839333 - MIR SINE MIR -6 256 71 220 160 40 20 chr5 13246347 13246397 -189839135 + MIR SINE MIR 90 140 -122 186 333 103 40 chr5 13246441 13246567 -189838965 - L2 LINE L2 -1 3271 3138 1714 171 10 10 chr5 13246815 13247107 -189838425 - AluJo SINE Alu -20 292 1 2246 130 34 6 chr5 13247774 13248128 -189837404 - THE1B LTR MaLR 0 364 1 985 200 15 15 chr5 13248128 13248333 -189837199 - MER3 DNA MER1_type -4 205 1 640 180 0 0 chr5 13248796 13248896 -189836636 - FRAM SINE Alu -32 144 45 734 167 0 0 chr5 13250128 13250242 -189835290 + FLAM_C SINE Alu 5 118 -25 933 83 0 0 chr5 13250350 13250470 -189835062 - AluSq/x SINE Alu -192 120 1 1751 175 34 3 chr5 13250537 13250829 -189834703 - AluSx SINE Alu -11 301 1 1264 216 163 25 chr5 13251318 13251716 -189833816 - MLT1H LTR MaLR 0 549 97 473 118 0 0 chr5 13252153 13252221 -189833311 + AluS SINE Alu 233 300 -12 265 324 56 0 chr5 13252331 13252439 -189833093 - L2 LINE L2 -17 3296 3183 1648 165 7 65 chr5 13252515 13252824 -189832708 - AluJb SINE Alu -21 291 1 184 282 145 30 chr5 13252829 13252960 -189832572 - L2 LINE L2 -241 3072 2927 216 268 18 0 chr5 13253205 13253261 -189832271 + L2 LINE L2 2882 2938 -334 27 0 0 0 chr5 13253468 13253495 -189832037 + AT_rich Low_complexity Low_complexity 1 27 0 2521 67 0 0 chr5 13254249 13254548 -189830984 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 13254711 13254748 -189830784 + AT_rich Low_complexity Low_complexity 1 37 0 552 261 154 0 chr5 13255073 13255261 -189830271 - MLT1L LTR MaLR -8 607 391 213 245 0 167 chr5 13255568 13255760 -189829772 - L2 LINE L2 -38 3234 3075 405 221 139 17 chr5 13258678 13258850 -189826682 + Charlie7 DNA MER1_type 2417 2609 -3 431 246 56 85 chr5 13259063 13259453 -189826079 - L1MC5 LINE L1 -272 7689 7311 235 267 126 58 chr5 13259439 13259645 -189825887 - L1MC4 LINE L1 -549 7493 7274 * 628 268 83 20 chr5 13259921 13260175 -189825357 - L1MC4 LINE L1 -981 7061 6792 1996 130 29 0 chr5 13263482 13263818 -189821714 - AluSx SINE Alu 0 344 1 310 333 63 0 chr5 13263912 13264023 -189821509 - L2 LINE L2 -2 3270 3153 229 377 31 13 chr5 13264428 13264587 -189820945 - MIR3 SINE MIR -5 203 42 254 88 0 0 chr5 13265100 13265134 -189820398 + AluSp/q SINE Alu 244 277 -26 405 223 45 36 chr5 13265731 13265843 -189819689 + MER81 DNA DNA 2 114 0 326 227 134 10 chr5 13266306 13266403 -189819129 + MLT1C LTR MaLR 5 113 -354 2182 113 0 0 chr5 13266420 13266703 -189818829 - AluSx SINE Alu -29 283 1 614 129 0 11 chr5 13266775 13266868 -189818664 - AluS SINE Alu -221 92 1 1153 214 58 90 chr5 13266868 13267246 -189818286 + MLT1C LTR MaLR 102 467 0 508 112 31 0 chr5 13267705 13267803 -189817729 + CT-rich Low_complexity Low_complexity 2 102 0 283 187 13 27 chr5 13268437 13268512 -189817020 - MLT1K LTR MaLR -323 265 192 408 40 0 0 chr5 13268872 13268922 -189816610 + (GA)n Simple_repeat Simple_repeat 2 51 0 * 558 0 0 0 chr5 13268921 13268983 -189816549 + (TG)n Simple_repeat Simple_repeat 2 63 0 1278 210 102 46 chr5 13269037 13269249 -189816283 + L1MD3 LINE L1 7459 7658 -384 2414 104 0 0 chr5 13269249 13269558 -189815974 + AluSx SINE Alu 1 309 -3 1278 210 102 46 chr5 13269558 13269573 -189815959 + L1MD3 LINE L1 7658 7671 -371 3433 191 10 2 chr5 13269573 13270171 -189815361 - MER77 LTR ERV1 -2 603 1 1278 210 102 46 chr5 13270171 13270436 -189815096 + L1MD3 LINE L1 7671 8041 -1 2379 80 23 0 chr5 13270456 13270755 -189814777 + AluSx SINE Alu 1 306 -6 381 283 80 22 chr5 13271300 13271438 -189814094 + L2 LINE L2 3166 3311 -2 2060 146 0 7 chr5 13271621 13271798 -189813734 - AluSx SINE Alu -6 306 130 189 74 0 0 chr5 13271798 13271825 -189813707 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2060 146 0 7 chr5 13271825 13271955 -189813577 - AluSx SINE Alu -182 130 1 1660 187 124 26 chr5 13272349 13272767 -189812765 + MLT1C LTR MaLR 1 459 -8 266 115 19 0 chr5 13272769 13272821 -189812711 + (TATAA)n Simple_repeat Simple_repeat 1 53 0 232 247 98 46 chr5 13273070 13273264 -189812268 + L1ME3A LINE L1 5273 5476 -2332 2210 229 61 42 chr5 13273333 13273927 -189811605 + MER77 LTR ERV1 1 605 0 1502 189 70 22 chr5 13274385 13274755 -189810777 + MLT1B LTR MaLR 1 388 -2 206 245 75 0 chr5 13276526 13276579 -189808953 - L2 LINE L2 -16 3256 3200 410 303 19 19 chr5 13276600 13276755 -189808777 + MIR SINE MIR 90 244 -18 1712 159 0 70 chr5 13277056 13277371 -189808161 - AluJo SINE Alu -19 293 1 321 260 107 34 chr5 13277372 13277518 -189808014 + MER112 DNA MER1_type 6 140 -120 387 0 0 0 chr5 13277518 13277561 -189807971 + (TG)n Simple_repeat Simple_repeat 2 44 0 1416 180 67 0 chr5 13277561 13277828 -189807704 - AluJb SINE Alu -27 285 1 321 260 107 34 chr5 13277828 13277857 -189807675 + MER112 DNA MER1_type 139 195 -65 442 260 133 73 chr5 13278435 13278789 -189806743 + MLT1J2 LTR MaLR 31 405 -45 1533 224 80 23 chr5 13278904 13279341 -189806191 + MLT1C LTR MaLR 6 467 0 2170 118 3 0 chr5 13279552 13279840 -189805692 - AluSx SINE Alu -18 294 6 2144 98 3 18 chr5 13280222 13280554 -189804978 - AluSx SINE Alu 0 328 1 1158 216 16 0 chr5 13280614 13280859 -189804673 - MLT1C LTR MaLR -6 461 213 1865 149 0 17 chr5 13280860 13281169 -189804363 - AluSx SINE Alu 0 304 1 1478 260 32 46 chr5 13281186 13281709 -189803823 + L1ME3A LINE L1 5595 6110 -60 2179 95 0 63 chr5 13281828 13282145 -189803387 + AluSx SINE Alu 1 297 -15 1244 106 0 0 chr5 13282150 13282311 -189803221 + AluSq SINE Alu 139 299 -14 208 121 0 0 chr5 13282353 13282386 -189803146 + MIR SINE MIR 218 250 -12 331 230 50 20 chr5 13282502 13282602 -189802930 + L1ME3A LINE L1 6060 6162 -8 230 289 56 0 chr5 13282622 13282712 -189802820 + MIR SINE MIR 148 242 -20 568 253 143 47 chr5 13282736 13282837 -189802695 - MER46C DNA MER2_type -6 332 242 2686 161 66 19 chr5 13282837 13283323 -189802209 - LTR22 LTR ERVK 0 509 1 568 253 143 47 chr5 13283323 13283522 -189802010 - MER46C DNA MER2_type -96 242 3 350 244 56 0 chr5 13283893 13283983 -189801549 + MER53 DNA DNA 1 95 -94 * 380 191 278 8 chr5 13283909 13284035 -189801497 - MER53 DNA DNA -7 182 23 2055 171 34 8 chr5 13284099 13284479 -189801053 + MLT1B LTR MaLR 1 390 0 1901 145 21 0 chr5 13285133 13285416 -189800116 - AluSx SINE Alu -23 289 1 671 237 19 0 chr5 13285526 13285682 -189799850 - MER20 DNA MER1_type -14 205 47 259 160 40 0 chr5 13286658 13286708 -189798824 - MER5B DNA MER1_type -126 52 1 247 256 73 0 chr5 13286723 13286805 -189798727 + MER5B DNA MER1_type 58 145 -33 325 203 35 7 chr5 13286973 13287052 -189798480 + MER5A DNA MER1_type 13 109 -80 181 287 85 43 chr5 13287094 13287188 -189798344 - MIR3 SINE MIR -39 169 72 428 331 51 28 chr5 13287799 13287923 -189797609 - MARNA DNA Mariner -242 344 224 1967 132 7 26 chr5 13287923 13288226 -189797306 - AluJb SINE Alu -15 297 1 428 331 51 28 chr5 13288226 13288355 -189797177 - MARNA DNA Mariner -362 224 85 429 76 38 13 chr5 13288450 13288529 -189797003 + CT-rich Low_complexity Low_complexity 2 82 0 1706 221 35 20 chr5 13289132 13289588 -189795944 - MLT1C LTR MaLR -2 465 3 2111 121 0 0 chr5 13289650 13289959 -189795573 - AluSx SINE Alu 0 313 5 2420 84 0 10 chr5 13290066 13290415 -189795117 - AluSq SINE Alu 0 313 1 426 198 57 38 chr5 13291023 13291180 -189794352 - MLT1D LTR MaLR -16 451 292 591 180 55 0 chr5 13291272 13291400 -189794132 - MLT1D LTR MaLR -366 139 5 302 212 0 115 chr5 13291811 13291924 -189793608 + MER5A DNA MER1_type 10 109 -80 379 291 62 34 chr5 13292473 13292652 -189792880 + MLT1K LTR MaLR 145 328 -260 239 268 28 0 chr5 13292920 13292991 -189792541 + MLT1K LTR MaLR 509 581 -7 1955 156 0 3 chr5 13293270 13293558 -189791974 - AluJb SINE Alu -25 287 1 369 118 36 154 chr5 13293558 13293668 -189791864 - AluJo SINE Alu -167 135 39 401 301 75 7 chr5 13293934 13294080 -189791452 + MIR SINE MIR 107 262 0 381 246 82 58 chr5 13294861 13295032 -189790500 - MLT1C LTR MaLR -287 180 6 2281 92 17 0 chr5 13295478 13295771 -189789761 - AluSx SINE Alu -14 298 1 1140 262 36 23 chr5 13295776 13296079 -189789453 + LTR40a LTR ERVL 65 371 -148 1429 198 40 11 chr5 13296079 13296531 -189789001 + MER74A LTR ERVL 1 558 0 837 131 35 0 chr5 13296534 13296679 -189788853 + LTR40a LTR ERVL 370 519 0 443 196 0 28 chr5 13296970 13297077 -189788455 - MER5A DNA MER1_type -84 105 2 228 235 0 0 chr5 13297410 13297461 -189788071 + L2 LINE L2 3221 3271 -1 2314 89 14 0 chr5 13297674 13297965 -189787567 + AluSp SINE Alu 1 295 -18 224 295 64 27 chr5 13298381 13298496 -189787036 + MIR SINE MIR 40 157 -75 1615 192 65 57 chr5 13298941 13299399 -189786133 + MLT1C LTR MaLR 6 467 0 2204 138 0 0 chr5 13299773 13300070 -189785462 - AluSx SINE Alu -15 297 1 194 289 62 99 chr5 13300235 13300446 -189785086 + MIR SINE MIR 55 257 -5 1332 190 40 0 chr5 13300506 13300780 -189784752 + MER58B DNA MER1_type 57 341 0 367 300 138 9 chr5 13300780 13300990 -189784542 + MIR SINE MIR 26 262 0 688 281 76 38 chr5 13301556 13301926 -189783606 + MLT1J2 LTR MaLR 59 442 -8 312 269 107 54 chr5 13301926 13302075 -189783457 - MIR3 SINE MIR -40 168 12 35 0 0 0 chr5 13302081 13302116 -189783416 + AT_rich Low_complexity Low_complexity 1 35 0 1339 263 68 41 chr5 13302254 13302669 -189782863 - LTR41 LTR ERVL -6 767 342 1096 290 91 22 chr5 13302947 13303498 -189782034 - MLT1E LTR MaLR 0 593 5 2118 144 3 3 chr5 13303536 13303848 -189781684 - AluSx SINE Alu 0 312 1 1399 226 54 57 chr5 13304093 13304553 -189780979 - MLT1C LTR MaLR 0 467 9 275 238 33 90 chr5 13304837 13304959 -189780573 + MIR SINE MIR 81 195 -67 468 86 14 20 chr5 13304962 13305047 -189780485 + MLT1E1 LTR MaLR 1 81 -512 424 304 26 41 chr5 13305164 13305358 -189780174 - MLT1K LTR MaLR -244 344 154 847 313 80 17 chr5 13305762 13306222 -189779310 + LTR33 LTR ERVL 1 489 -32 2042 142 0 31 chr5 13306273 13306590 -189778942 + AluSx SINE Alu 4 310 -2 1778 164 3 40 chr5 13308215 13308519 -189777013 - AluJo SINE Alu -14 298 6 2469 73 13 0 chr5 13308544 13308844 -189776688 - AluY SINE Alu -7 304 1 2606 134 11 17 chr5 13309917 13310380 -189775152 + MER4C LTR ERV1 3 462 -3 1722 198 19 11 chr5 13310583 13310956 -189774576 + MLT1B LTR MaLR 15 390 0 2010 108 56 10 chr5 13311863 13312151 -189773381 - AluSq SINE Alu -12 301 1 2569 62 3 3 chr5 13312177 13312485 -189773047 - AluY SINE Alu -3 308 1 405 279 93 6 chr5 13313890 13314062 -189771470 + L2 LINE L2 3107 3293 -20 1980 125 25 7 chr5 13314790 13315107 -189770425 - AluSq SINE Alu 0 322 1 3144 181 71 72 chr5 13315422 13316285 -189769247 + MER21B LTR ERV1 1 862 -1 469 310 139 40 chr5 13317817 13318593 -189766939 - L2 LINE L2 -40 3273 2428 337 258 106 46 chr5 13319569 13319720 -189765812 - MER63A DNA MER1_type 0 210 51 2386 101 0 3 chr5 13321208 13321514 -189764018 - AluSq SINE Alu -8 305 1 196 297 121 0 chr5 13322836 13322927 -189762605 + MIR SINE MIR 99 200 -62 1777 174 16 7 chr5 13323295 13323599 -189761933 + AluJo SINE Alu 1 307 -5 466 254 8 8 chr5 13323798 13323916 -189761616 + L2 LINE L2 3193 3310 -3 2270 101 0 3 chr5 13325082 13325378 -189760154 + AluSx SINE Alu 1 295 -17 447 52 0 0 chr5 13325379 13325437 -189760095 + (CA)n Simple_repeat Simple_repeat 2 59 0 1918 118 54 25 chr5 13325441 13325721 -189759811 + AluSx SINE Alu 1 288 -24 401 75 0 15 chr5 13325724 13325791 -189759741 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2389 76 9 22 chr5 13326917 13327233 -189758299 + AluSp SINE Alu 1 312 -1 2088 135 10 0 chr5 13328187 13328483 -189757049 - AluSx SINE Alu -13 299 1 299 296 171 19 chr5 13329549 13329765 -189755767 + MIR SINE MIR 14 262 0 2034 148 0 22 chr5 13329808 13330125 -189755407 - AluJb SINE Alu -2 310 1 555 225 59 59 chr5 13331016 13331047 -189754485 + MER20 DNA MER1_type 33 63 -156 2062 125 3 10 chr5 13331047 13331343 -189754189 - AluSx SINE Alu -18 294 1 555 225 59 59 chr5 13331343 13331498 -189754034 + MER20 DNA MER1_type 62 219 0 1866 180 10 0 chr5 13331770 13332076 -189753456 - AluJo SINE Alu -3 309 1 2183 85 14 3 chr5 13332449 13332754 -189752778 + AluSq SINE Alu 1 308 0 1551 178 132 64 chr5 13332997 13333394 -189752138 + MLT1D LTR MaLR 3 438 -67 2873 7 0 0 chr5 13333394 13333696 -189751836 - AluYb8 SINE Alu -16 302 1 1551 178 132 64 chr5 13333696 13333769 -189751763 + MLT1D LTR MaLR 438 505 0 804 136 0 0 chr5 13333846 13333964 -189751568 - FLAM_C SINE Alu -15 118 1 22 0 0 0 chr5 13333985 13334007 -189751525 + AT_rich Low_complexity Low_complexity 1 22 0 357 315 151 50 chr5 13336019 13336105 -189749427 + L1ME4a LINE L1 5439 5515 -2293 1791 87 101 56 chr5 13336105 13336391 -189749141 + AluSg SINE Alu 3 301 -9 357 315 151 50 chr5 13336391 13336542 -189748990 + L1ME4a LINE L1 5515 5700 -2108 331 271 192 34 chr5 13336594 13336771 -189748761 + L1ME4a LINE L1 5841 6045 -76 422 289 175 42 chr5 13336806 13337416 -189748116 - L2 LINE L2 0 3313 2625 1527 203 115 18 chr5 13337441 13337894 -189747638 - L1M4 LINE L1 -848 5298 4802 26 64 0 0 chr5 13340517 13340564 -189744968 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 13340971 13340995 -189744537 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2088 110 0 22 chr5 13341020 13341339 -189744193 + AluSx SINE Alu 1 312 0 543 53 0 0 chr5 13341339 13341414 -189744118 + (TA)n Simple_repeat Simple_repeat 1 75 0 24 32 0 0 chr5 13342651 13342682 -189742850 + AT_rich Low_complexity Low_complexity 1 31 0 1982 110 45 0 chr5 13343848 13344138 -189741394 + AluSx SINE Alu 1 303 -9 190 354 108 0 chr5 13344697 13344827 -189740705 + MIR SINE MIR 100 243 -19 324 94 0 0 chr5 13345366 13345419 -189740113 + (CA)n Simple_repeat Simple_repeat 1 53 0 2297 88 0 25 chr5 13346434 13346751 -189738781 + AluSc SINE Alu 1 309 0 483 273 123 0 chr5 13346751 13346932 -189738600 + L2 LINE L2 2364 2567 -747 366 299 76 28 chr5 13347224 13347337 -189738195 + MIR3 SINE MIR 25 148 -60 2020 115 0 20 chr5 13347337 13347642 -189737890 + AluSx SINE Alu 1 299 -13 366 299 76 28 chr5 13347642 13347672 -189737860 + MIR3 SINE MIR 148 175 -33 274 347 80 15 chr5 13347919 13348118 -189737414 + MIR SINE MIR 11 222 -40 2091 117 0 16 chr5 13348397 13348713 -189736819 + AluSx SINE Alu 2 312 0 239 351 92 51 chr5 13349166 13349798 -189735734 - L2 LINE L2 -337 2977 2320 2774 151 49 31 chr5 13352219 13352774 -189732758 + MER34B LTR ERV1 1 565 0 329 324 92 61 chr5 13354287 13354580 -189730952 - HAL1 LINE L1 -1060 1447 1146 926 94 101 7 chr5 13355308 13355457 -189730075 - AluSp SINE Alu -150 163 1 23 0 0 0 chr5 13355574 13355597 -189729935 + AT_rich Low_complexity Low_complexity 1 23 0 2146 100 3 10 chr5 13355597 13355897 -189729635 - AluSp SINE Alu -15 298 1 3055 181 36 6 chr5 13355898 13356543 -189728989 - L1M4 LINE L1 -815 5331 4668 850 124 0 0 chr5 13356551 13356680 -189728852 - FLAM_C SINE Alu -1 142 14 491 93 67 0 chr5 13356776 13356851 -189728681 - MADE1 DNA Mariner 0 80 1 2053 120 7 0 chr5 13356964 13357272 -189728260 + AluSx SINE Alu 1 310 -2 329 272 48 20 chr5 13357820 13357967 -189727565 - MER77 LTR ERV1 -28 577 427 293 257 27 14 chr5 13358044 13358118 -189727414 - MER68 LTR ERV1 -264 298 224 2117 113 7 3 chr5 13358587 13359012 -189726520 + AluSq SINE Alu 1 426 0 2024 117 0 3 chr5 13359040 13359330 -189726202 + AluSx SINE Alu 1 289 -23 1299 180 21 28 chr5 13359817 13360100 -189725432 + AluJo SINE Alu 27 307 -5 472 239 72 24 chr5 13360171 13360338 -189725194 + MIR SINE MIR 62 236 -26 1940 139 0 7 chr5 13360457 13360801 -189724731 - AluSx SINE Alu 0 312 1 2198 110 0 0 chr5 13360805 13361114 -189724418 - AluSx SINE Alu -3 309 1 325 243 47 81 chr5 13361426 13361574 -189723958 - MLT1J LTR MaLR -135 376 234 736 223 16 77 chr5 13362219 13362466 -189723066 + MARNA DNA Mariner 184 415 -171 228 191 0 43 chr5 13363167 13363214 -189722318 - L2 LINE L2 0 3272 3228 2577 30 3 0 chr5 13363429 13363733 -189721799 - AluY SINE Alu -6 305 1 2163 119 86 6 chr5 13364153 13364490 -189721042 + THE1B LTR MaLR 1 364 0 297 155 0 0 chr5 13364616 13364674 -189720858 + (CA)n Simple_repeat Simple_repeat 1 58 0 692 268 84 9 chr5 13365026 13365239 -189720293 - MIR SINE MIR -19 243 15 503 256 151 77 chr5 13365323 13365869 -189719663 - MLT1G LTR MaLR -6 584 5 1838 89 4 0 chr5 13366198 13366446 -189719086 + AluSp SINE Alu 54 302 -11 1922 86 25 4 chr5 13367129 13367435 -189718097 + AluSx SINE Alu 1 312 0 412 246 0 79 chr5 13367530 13367656 -189717876 + MIR SINE MIR 115 230 -32 32 67 0 0 chr5 13368184 13368244 -189717288 + AT_rich Low_complexity Low_complexity 1 60 0 2016 124 0 7 chr5 13368250 13368548 -189716984 - AluSg SINE Alu -14 296 1 3332 225 70 78 chr5 13368574 13368637 -189716895 - L1MC4 LINE L1 -23 8019 7957 2100 121 0 3 chr5 13368637 13368942 -189716590 - AluSx SINE Alu -8 304 1 3332 225 70 78 chr5 13368942 13369544 -189715988 - L1MC4 LINE L1 -85 7957 7368 2121 108 0 14 chr5 13369544 13369840 -189715692 - AluSq SINE Alu -21 292 1 3332 225 70 78 chr5 13369840 13370447 -189715085 - L1MC4 LINE L1 -674 7368 6757 1977 122 10 0 chr5 13370662 13370958 -189714574 + AluSp SINE Alu 1 299 -14 948 238 75 34 chr5 13370962 13371227 -189714305 + MLT1C LTR MaLR 192 467 0 337 331 0 17 chr5 13371304 13371485 -189714047 + (CA)n Simple_repeat Simple_repeat 2 179 0 288 360 0 6 chr5 13371591 13371769 -189713763 + (CA)n Simple_repeat Simple_repeat 2 178 0 325 358 0 0 chr5 13371782 13371961 -189713571 + (CA)n Simple_repeat Simple_repeat 2 180 0 344 300 0 44 chr5 13371966 13372146 -189713386 + (CACG)n Simple_repeat Simple_repeat 2 173 0 247 380 16 0 chr5 13372188 13372381 -189713151 - L1MC/D LINE L1 -302 5819 5625 678 226 55 6 chr5 13372387 13372551 -189712981 - L1MA10 LINE L1 0 6334 6163 759 176 15 0 chr5 13372559 13372690 -189712842 - FLAM_A SINE Alu 0 133 1 779 205 42 6 chr5 13373248 13373414 -189712118 + MER20 DNA MER1_type 34 205 -14 2146 100 0 10 chr5 13373502 13373812 -189711720 + AluSx SINE Alu 1 307 -5 810 218 41 0 chr5 13374497 13374667 -189710865 - MER45A DNA AcHobo -1 177 1 2577 124 28 5 chr5 13374840 13375228 -189710304 - MLT2C1 LTR ERVL 0 397 1 284 209 353 14 chr5 13376320 13376459 -189709073 - MER5A DNA MER1_type -3 186 1 926 196 41 0 chr5 13376774 13376993 -189708539 + L1MB7 LINE L1 5955 6182 -2 203 287 107 57 chr5 13377169 13377291 -189708241 - MIR3 SINE MIR -5 203 76 1757 166 0 10 chr5 13377620 13377922 -189707610 - AluJb SINE Alu -13 299 1 592 188 0 60 chr5 13378530 13378647 -189706885 + MER81 DNA DNA 2 111 -3 2047 106 24 0 chr5 13379379 13379671 -189705861 + AluSq SINE Alu 1 299 -14 221 116 58 43 chr5 13379672 13379741 -189705791 + GA-rich Low_complexity Low_complexity 1 70 0 257 274 84 106 chr5 13380142 13380321 -189705211 - MIR SINE MIR -14 248 74 315 235 0 0 chr5 13380411 13380479 -189705053 - MER5A DNA MER1_type -106 83 16 490 241 196 9 chr5 13380634 13380803 -189704729 - L1MD2 LINE L1 -9 6350 6128 180 0 0 0 chr5 13380803 13380823 -189704709 + (TG)n Simple_repeat Simple_repeat 2 21 0 490 241 196 9 chr5 13380823 13380877 -189704655 - L1MD2 LINE L1 -231 6128 6085 * 601 297 61 0 chr5 13380873 13381085 -189704447 - L1MD1 LINE L1 -159 6083 5859 2206 74 7 10 chr5 13381363 13381659 -189703873 - AluSc SINE Alu -14 295 1 1573 167 3 31 chr5 13381684 13382004 -189703528 - AluJo SINE Alu 0 312 1 399 222 114 68 chr5 13382040 13382246 -189703286 - L1 LINE L1 -2799 3347 3106 323 277 92 0 chr5 13382253 13382383 -189703149 - L1 LINE L1 -3136 3010 2869 1904 130 60 41 chr5 13382916 13383284 -189702248 + THE1C LTR MaLR 1 375 0 2213 97 0 0 chr5 13383315 13383615 -189701917 - AluY SINE Alu -11 300 1 326 215 158 51 chr5 13384374 13384532 -189701000 - MER5A DNA MER1_type -6 183 9 745 196 27 71 chr5 13384547 13384613 -189700919 - MER5B DNA MER1_type 0 178 111 2474 75 0 0 chr5 13384613 13384921 -189700611 + AluSq SINE Alu 1 308 -5 745 196 27 71 chr5 13384921 13385038 -189700494 - MER5B DNA MER1_type -67 111 3 1979 107 4 0 chr5 13385300 13385607 -189699925 + AluSx SINE Alu 1 308 0 1847 159 3 7 chr5 13385943 13386252 -189699280 + AluJo SINE Alu 1 308 -4 618 289 132 0 chr5 13386272 13386500 -189699032 + MLT1H LTR MaLR 165 422 -127 2205 115 0 0 chr5 13386625 13386937 -189698595 + AluSx SINE Alu 1 312 0 261 0 0 0 chr5 13387175 13387204 -189698328 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1772 131 4 0 chr5 13387212 13387487 -189698045 - AluJb SINE Alu -36 276 1 25 0 0 0 chr5 13387738 13387763 -189697769 + AT_rich Low_complexity Low_complexity 1 25 0 1944 117 3 0 chr5 13387968 13388258 -189697274 + AluSx SINE Alu 1 291 -21 199 185 385 41 chr5 13389011 13389133 -189696399 + L2 LINE L2 2919 3080 -233 204 40 0 0 chr5 13389818 13389843 -189695689 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 406 248 73 0 chr5 13389915 13390024 -189695508 - MIR SINE MIR -35 227 111 641 72 155 0 chr5 13390661 13390758 -189694774 + THE1C LTR MaLR 1 112 -263 264 59 0 0 chr5 13391141 13391175 -189694357 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 40 0 0 0 chr5 13392335 13392375 -189693157 + GC_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 13392558 13392582 -189692950 + GC_rich Low_complexity Low_complexity 1 24 0 23 101 0 0 chr5 13392764 13392843 -189692689 + GC_rich Low_complexity Low_complexity 1 79 0 21 0 0 0 chr5 13394683 13394704 -189690828 + AT_rich Low_complexity Low_complexity 1 21 0 2457 61 0 22 chr5 13394773 13395106 -189690426 + AluY SINE Alu 1 311 0 1613 148 104 4 chr5 13395223 13395493 -189690039 + AluJb SINE Alu 1 297 -15 1954 138 0 7 chr5 13395820 13396096 -189689436 + AluSx SINE Alu 31 304 -8 191 314 43 0 chr5 13396325 13396395 -189689137 + MIR SINE MIR 2 74 -188 276 98 18 6 chr5 13396879 13396933 -189688599 + Alu SINE Alu 1 37 -264 223 89 0 44 chr5 13396933 13396978 -189688554 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 2482 81 0 0 chr5 13398117 13398413 -189687119 + AluSg SINE Alu 1 296 -14 205 363 29 29 chr5 13398594 13398696 -189686836 + L2 LINE L2 3210 3311 -2 961 205 6 0 chr5 13399721 13399887 -189685645 + AluJb SINE Alu 136 302 -10 2071 147 6 16 chr5 13400585 13400899 -189684633 - AluJo SINE Alu -1 311 1 243 0 0 0 chr5 13401714 13401741 -189683791 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2275 85 3 3 chr5 13401742 13402052 -189683480 - AluSq SINE Alu 0 310 1 273 146 0 0 chr5 13402653 13402701 -189682831 + (CA)n Simple_repeat Simple_repeat 1 48 0 2111 89 55 27 chr5 13403407 13403700 -189681832 + AluSx SINE Alu 1 301 -11 1436 274 65 23 chr5 13404183 13404737 -189680795 + L1ME3A LINE L1 5583 6159 -11 188 35 35 0 chr5 13404737 13404766 -189680766 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 441 119 0 0 chr5 13404772 13404831 -189680701 - AluJ/FLAM SINE Alu -252 60 2 226 360 45 9 chr5 13404888 13404999 -189680533 + MIR SINE MIR 148 262 0 2155 123 0 3 chr5 13405478 13405771 -189679761 + AluSq SINE Alu 1 292 -21 681 255 0 25 chr5 13405865 13406026 -189679506 + MIR SINE MIR 98 254 -8 2347 94 3 3 chr5 13406742 13407041 -189678491 + AluSq SINE Alu 1 299 -14 905 234 75 34 chr5 13407045 13407310 -189678222 + MLT1C LTR MaLR 192 467 0 367 341 0 0 chr5 13407431 13407610 -189677922 + (CA)n Simple_repeat Simple_repeat 2 180 0 294 366 0 0 chr5 13407667 13407842 -189677690 + (CA)n Simple_repeat Simple_repeat 2 176 0 343 352 0 0 chr5 13407877 13408056 -189677476 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 346 291 0 53 chr5 13408008 13408197 -189677335 + (CACG)n Simple_repeat Simple_repeat 1 179 0 243 380 16 0 chr5 13408261 13408454 -189677078 - L1MC/D LINE L1 -302 5819 5625 648 226 55 6 chr5 13408460 13408624 -189676908 - L1MA10 LINE L1 0 6334 6163 825 188 0 0 chr5 13408632 13408765 -189676767 - FLAM_A SINE Alu 0 133 1 1610 143 4 24 chr5 13409299 13409551 -189675981 - AluJo SINE Alu -38 274 28 1070 196 50 36 chr5 13409702 13410003 -189675529 - LTR37A LTR ERV1 0 426 122 1499 214 33 82 chr5 13410009 13410495 -189675037 + MLT1C LTR MaLR 6 467 0 477 165 31 31 chr5 13410495 13410620 -189674912 - LTR37A LTR ERV1 -301 125 1 675 35 0 0 chr5 13411435 13411521 -189674011 + (GA)n Simple_repeat Simple_repeat 2 87 0 927 141 7 0 chr5 13411521 13411663 -189673869 - AluSg/x SINE Alu -41 271 129 885 189 0 0 chr5 13411681 13411824 -189673708 - FLAM_C SINE Alu 0 143 1 2352 107 0 0 chr5 13412620 13412918 -189672614 - AluSx SINE Alu -14 298 1 413 312 29 12 chr5 13412982 13413152 -189672380 + MLT1L LTR MaLR 433 605 -10 1294 140 151 65 chr5 13413759 13414063 -189671469 + AluJo SINE Alu 1 302 0 192 234 106 64 chr5 13414491 13414585 -189670947 - MIR SINE MIR -36 226 129 428 290 23 8 chr5 13414667 13414798 -189670734 - LTR67 LTR ERVL -1 556 424 180 0 0 0 chr5 13414828 13414848 -189670684 + (A)n Simple_repeat Simple_repeat 1 20 0 2387 227 48 5 chr5 13414862 13415448 -189670084 - L1MC3 LINE L1 -25 7760 7150 819 159 0 43 chr5 13415881 13416019 -189669513 + FLAM_C SINE Alu 1 132 -1 2194 109 0 61 chr5 13416078 13416407 -189669125 - AluSx SINE Alu -3 309 1 1570 189 115 9 chr5 13416664 13417002 -189668530 + MLT1A2 LTR MaLR 1 374 0 271 208 0 57 chr5 13418442 13418548 -189666984 + (CTCA)n Simple_repeat Simple_repeat 4 103 0 184 246 70 0 chr5 13419347 13419404 -189666128 + MIR SINE MIR 180 240 -22 183 146 0 0 chr5 13419967 13420008 -189665524 + (A)n Simple_repeat Simple_repeat 1 41 0 485 289 18 36 chr5 13420133 13420299 -189665233 + L1ME1 LINE L1 5953 6115 -51 330 250 7 46 chr5 13420312 13420464 -189665068 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 1995 121 3 35 chr5 13420523 13420838 -189664694 + AluSx SINE Alu 1 305 -7 2108 132 3 10 chr5 13420850 13421146 -189664386 + AluJo SINE Alu 5 298 -14 216 0 0 0 chr5 13421790 13421814 -189663718 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2317 81 14 0 chr5 13422366 13422662 -189662870 - AluSc SINE Alu -9 300 1 976 139 7 0 chr5 13422662 13422806 -189662726 - FRAM SINE Alu -14 162 18 231 248 9 55 chr5 13423332 13423441 -189662091 + G-rich Low_complexity Low_complexity 2 105 0 1644 232 64 2 chr5 13423614 13424049 -189661483 - MLT1C LTR MaLR 0 467 6 2211 111 0 3 chr5 13424491 13424780 -189660752 - AluSx SINE Alu -24 288 1 331 231 64 22 chr5 13425012 13425167 -189660365 - MER63 DNA MER1_type -2 1686 675 470 254 42 28 chr5 13425198 13425340 -189660192 - MIR SINE MIR -92 170 27 323 307 68 0 chr5 13425358 13425521 -189660011 - L1ME4a LINE L1 -224 5897 5724 413 249 6 0 chr5 13425851 13426028 -189659504 + (CA)n Simple_repeat Simple_repeat 1 178 0 2151 182 42 7 chr5 13426306 13426576 -189658956 - MLT1C LTR MaLR -16 451 192 6547 84 9 15 chr5 13426576 13426958 -189658574 + L1PA10 LINE L1 5106 5489 -679 2384 93 0 3 chr5 13426958 13427258 -189658274 + AluSp SINE Alu 1 299 -14 6547 84 9 15 chr5 13427258 13427929 -189657603 + L1PA10 LINE L1 5489 6155 -13 198 0 0 0 chr5 13427929 13427951 -189657581 + (TTAAA)n Simple_repeat Simple_repeat 4 25 0 6547 84 9 15 chr5 13427951 13427962 -189657570 + L1PA10 LINE L1 6155 6165 -3 2151 182 42 7 chr5 13427962 13428124 -189657408 - MLT1C LTR MaLR -275 192 4 189 0 0 0 chr5 13428292 13428313 -189657219 + (T)n Simple_repeat Simple_repeat 1 21 0 3970 198 45 29 chr5 13428749 13429736 -189655796 - MER70-int LTR ERVL -754 4269 3268 1445 163 39 14 chr5 13429919 13430201 -189655331 - AluJo SINE Alu -23 289 1 22 0 0 0 chr5 13430310 13430332 -189655200 + AT_rich Low_complexity Low_complexity 1 22 0 789 104 16 0 chr5 13434749 13434874 -189650658 + MER4D LTR ERV1 202 328 -575 43 35 0 0 chr5 13434982 13435039 -189650493 + AT_rich Low_complexity Low_complexity 1 57 0 238 245 83 54 chr5 13436012 13436216 -189649316 - L1P5 LINE L1 -692 5464 5255 286 285 68 50 chr5 13436253 13436695 -189648837 - L1MEd LINE L1 -4865 1254 805 504 254 159 38 chr5 13437112 13437376 -189648156 - L1M4 LINE L1 -2808 3338 3043 1921 158 144 23 chr5 13437772 13438201 -189647331 + MLT2B1 LTR ERVL 1 481 -39 23 86 0 0 chr5 13438206 13438264 -189647268 + AT_rich Low_complexity Low_complexity 1 58 0 202 145 14 14 chr5 13438286 13438355 -189647177 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 95 0 0 chr5 13438367 13438430 -189647102 + AT_rich Low_complexity Low_complexity 1 63 0 788 258 174 39 chr5 13438764 13439326 -189646206 + L1ME3A LINE L1 5334 5971 -199 304 275 119 0 chr5 13439363 13439472 -189646060 + L1ME3A LINE L1 6048 6169 -1 977 274 125 38 chr5 13439536 13440265 -189645267 + L1ME4a LINE L1 4342 5133 -1013 24 0 0 0 chr5 13440285 13440309 -189645223 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr5 13441677 13441712 -189643820 + AT_rich Low_complexity Low_complexity 1 35 0 218 167 17 0 chr5 13441967 13442027 -189643505 + CT-rich Low_complexity Low_complexity 2 62 0 896 208 137 9 chr5 13443133 13443345 -189642187 + MER8 DNA MER2_type 1 239 0 405 0 0 0 chr5 13443478 13443523 -189642009 + (TG)n Simple_repeat Simple_repeat 2 46 0 31 0 0 0 chr5 13443977 13444008 -189641524 + AT_rich Low_complexity Low_complexity 1 31 0 1989 120 21 0 chr5 13444411 13444694 -189640838 - AluSx SINE Alu -23 289 1 337 226 117 29 chr5 13444792 13444929 -189640603 - L1M4 LINE L1 -2881 3265 3117 275 268 118 0 chr5 13444943 13445070 -189640462 - L1M4 LINE L1 -3136 3010 2869 549 259 157 39 chr5 13445441 13445873 -189639659 + L2 LINE L2 2831 3313 0 1955 161 7 0 chr5 13445944 13446249 -189639283 - AluJb SINE Alu -5 307 1 731 211 42 6 chr5 13446959 13447125 -189638407 + MER20 DNA MER1_type 34 205 -14 1714 111 14 18 chr5 13447217 13447496 -189638036 + AluSx SINE Alu 4 281 -31 235 286 104 26 chr5 13447695 13447887 -189637645 + L1ME LINE L1 5679 5885 -236 328 241 13 5 chr5 13448075 13448159 -189637373 + L1ME4a LINE L1 5479 5559 -562 262 297 143 15 chr5 13448247 13448590 -189636942 + L1ME4a LINE L1 5700 6086 -35 988 118 0 0 chr5 13448753 13448888 -189636644 + AluSq/x SINE Alu 1 135 -178 1083 95 0 0 chr5 13448888 13449025 -189636507 + AluSq SINE Alu 50 186 -127 354 61 0 0 chr5 13449150 13449199 -189636333 + (TA)n Simple_repeat Simple_repeat 2 50 0 547 220 46 12 chr5 13449204 13449344 -189636188 - MER31B LTR ERV1 -205 261 2 24 0 0 0 chr5 13450596 13450620 -189634912 + AT_rich Low_complexity Low_complexity 1 24 0 1788 196 25 23 chr5 13450864 13451256 -189634276 + Tigger2a DNA MER2_type 1 393 -41 204 250 0 0 chr5 13451271 13451319 -189634213 + (TA)n Simple_repeat Simple_repeat 1 48 0 543 244 68 99 chr5 13451400 13451724 -189633808 + MER39 LTR ERV1 264 577 -130 * 1128 44 0 7 chr5 13451719 13451855 -189633677 + THE1B LTR MaLR 228 362 -2 367 231 97 8 chr5 13452405 13452539 -189632993 - MER5C DNA MER1_type -164 160 15 22 0 0 0 chr5 13453671 13453693 -189631839 + AT_rich Low_complexity Low_complexity 1 22 0 1530 154 31 18 chr5 13453802 13454088 -189631444 + AluJo SINE Alu 1 290 -22 1838 181 15 52 chr5 13454224 13454628 -189630904 + MLT1B LTR MaLR 1 389 -1 276 30 0 0 chr5 13455158 13455191 -189630341 + (TG)n Simple_repeat Simple_repeat 2 34 0 1202 273 93 21 chr5 13455191 13455620 -189629912 - MLT1E LTR MaLR -24 569 110 211 340 109 13 chr5 13456009 13456165 -189629367 - L2 LINE L2 -1358 1956 1786 322 383 12 12 chr5 13456412 13456579 -189628953 - L2 LINE L2 -221 3051 2885 788 221 120 98 chr5 13456615 13456972 -189628560 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 13457188 13457210 -189628322 + AT_rich Low_complexity Low_complexity 1 22 0 2219 149 54 32 chr5 13458164 13458604 -189626928 - MSTA LTR MaLR 0 428 1 503 161 0 0 chr5 13458741 13458828 -189626704 - L1M2 LINE L1 -810 5481 5395 1858 121 10 43 chr5 13458841 13459146 -189626386 + THE1B LTR MaLR 68 362 -2 2315 195 4 16 chr5 13459148 13459655 -189625877 - L1M2 LINE L1 -744 5402 4902 2441 157 40 62 chr5 13459661 13460229 -189625303 + L1MA9 LINE L1 5757 6312 0 1489 190 71 6 chr5 13461278 13461604 -189623928 - MER31A LTR ERV1 -14 471 125 28 29 0 0 chr5 13461606 13461641 -189623891 + AT_rich Low_complexity Low_complexity 1 35 0 601 96 39 28 chr5 13461674 13461852 -189623680 + (TA)n Simple_repeat Simple_repeat 1 180 0 336 120 22 11 chr5 13461868 13461960 -189623572 + (TA)n Simple_repeat Simple_repeat 2 94 0 1447 115 0 0 chr5 13462075 13462292 -189623240 + HERVH LTR ERV1 2771 2987 -4726 883 135 20 0 chr5 13462286 13462434 -189623098 + HERVH LTR ERV1 3140 3290 -4423 * 3261 121 4 6 chr5 13462424 13462927 -189622605 + HERVH LTR ERV1 3492 3993 -3720 4396 142 0 1 chr5 13462929 13463592 -189621940 + HERVH LTR ERV1 4488 5149 -2564 1320 148 19 0 chr5 13463593 13463809 -189621723 + HERVH LTR ERV1 5600 5819 -1894 2368 96 50 13 chr5 13463809 13464185 -189621347 + HERVH LTR ERV1 7324 7713 0 2630 77 119 5 chr5 13464185 13464587 -189620945 + LTR7 LTR ERV1 1 448 -2 901 315 106 21 chr5 13464758 13465145 -189620387 - MLT1G1 LTR MaLR -161 434 15 1040 30 23 8 chr5 13465870 13466003 -189619529 - THE1B LTR MaLR -2 362 228 254 234 28 65 chr5 13465998 13466105 -189619427 - MER39 LTR ERV1 -130 577 475 * 301 280 0 13 chr5 13466320 13466395 -189619137 - L2 LINE L2 0 3313 3240 1390 175 51 22 chr5 13466716 13467012 -189618520 + AluJo SINE Alu 1 304 0 200 321 19 9 chr5 13467371 13467477 -189618055 - L2 LINE L2 -129 3184 3078 9475 188 14 19 chr5 13467477 13469270 -189616262 + LTR33-int LTR ERVL 2985 4768 -255 1054 222 84 53 chr5 13469459 13469815 -189615717 + MLT1C LTR MaLR 45 411 -56 305 274 66 0 chr5 13469811 13469917 -189615615 + LTR33 LTR ERVL 17 129 -392 * 1685 245 49 15 chr5 13470406 13470875 -189614657 + MLT1E3 LTR MaLR 140 624 0 1312 148 0 24 chr5 13471767 13471977 -189613555 + MLT1A1 LTR MaLR 1 205 -160 231 274 62 82 chr5 13472017 13472163 -189613369 - MIR SINE MIR -38 224 82 261 0 0 0 chr5 13472634 13472663 -189612869 + (CA)n Simple_repeat Simple_repeat 1 29 0 219 69 0 0 chr5 13473225 13473254 -189612278 + (CAT)n Simple_repeat Simple_repeat 2 30 0 346 315 88 11 chr5 13473280 13473461 -189612071 + MIR SINE MIR 20 214 -48 6193 125 19 16 chr5 13475580 13476546 -189608986 - LTR5 LTR ERVK 0 969 1 1978 80 278 6 chr5 13476826 13477178 -189608354 + LTR7 LTR ERV1 1 448 -2 17952 88 35 18 chr5 13477180 13479842 -189605690 + HERVH LTR ERV1 1 2706 -5007 311 336 52 0 chr5 13479970 13480086 -189605446 - MIR SINE MIR -71 137 16 561 275 22 14 chr5 13480804 13480942 -189604590 + LTR16A LTR ERVL 110 248 -202 477 241 44 29 chr5 13481401 13481538 -189603994 + LTR16A LTR ERVL 295 433 -17 4523 69 38 3 chr5 13482825 13483827 -189601705 + MER11A LTR ERVK 1 1266 0 24 85 0 0 chr5 13484160 13484219 -189601313 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr5 13485765 13485786 -189599746 + AT_rich Low_complexity Low_complexity 1 21 0 241 243 38 30 chr5 13486291 13486384 -189599148 + MIR SINE MIR 56 151 -57 221 203 20 7 chr5 13487690 13487843 -189597689 + (TA)n Simple_repeat Simple_repeat 1 155 0 224 205 39 0 chr5 13487859 13487937 -189597595 + (TA)n Simple_repeat Simple_repeat 2 82 0 2082 168 139 17 chr5 13487943 13488361 -189597171 - MLT2B1 LTR ERVL -51 469 1 472 251 160 39 chr5 13488773 13489080 -189596452 + L1M4 LINE L1 3052 3395 -2751 21 57 0 0 chr5 13490012 13490047 -189595485 + AT_rich Low_complexity Low_complexity 1 35 0 187 164 33 0 chr5 13490304 13490365 -189595167 + CT-rich Low_complexity Low_complexity 2 64 0 3644 142 9 17 chr5 13490701 13491342 -189594190 - L1PB2 LINE L1 -7 6144 5509 286 338 99 14 chr5 13491487 13491709 -189593823 + MIR SINE MIR 12 252 -10 220 378 44 0 chr5 13493488 13493578 -189591954 + MIR3 SINE MIR 81 174 -34 1630 63 0 0 chr5 13495116 13495322 -189590210 + AluY SINE Alu 99 304 -7 22 56 0 0 chr5 13496050 13496086 -189589446 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr5 13496366 13496401 -189589131 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 13496535 13496559 -189588973 + AT_rich Low_complexity Low_complexity 1 24 0 346 251 146 41 chr5 13496602 13497306 -189588226 - L1M4 LINE L1 -1027 5119 4342 958 279 184 14 chr5 13497369 13498079 -189587453 - L1ME3A LINE L1 -1 6169 5331 1290 225 19 3 chr5 13498545 13498852 -189586680 - L1MA9 LINE L1 -136 6176 5865 217 172 31 0 chr5 13499243 13499307 -189586225 + (TA)n Simple_repeat Simple_repeat 1 66 0 642 267 97 49 chr5 13499407 13499815 -189585717 - LTR38 LTR ERV1 -9 547 140 302 292 39 15 chr5 13500271 13500401 -189585131 - LTR38-int LTR ERV1 -449 6227 6095 670 309 46 33 chr5 13501596 13502003 -189583529 - LTR38-int LTR ERV1 -1214 5877 5372 1293 326 36 79 chr5 13502291 13503103 -189582429 - LTR38-int LTR ERV1 -2978 4144 3404 450 351 28 34 chr5 13503539 13503966 -189581566 - LTR38-int LTR ERV1 -1692 3262 2660 1053 45 0 32 chr5 13503967 13504122 -189581410 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 746 128 0 0 chr5 13504125 13504234 -189581298 - AluSq/x SINE Alu -204 109 1 2351 312 52 67 chr5 13504414 13506271 -189579261 - LTR38-int LTR ERV1 -4778 2344 517 665 333 32 21 chr5 13506481 13506878 -189578654 - LTR38-int LTR ERV1 -1730 3224 2636 1053 45 0 32 chr5 13506879 13507034 -189578498 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 630 123 28 0 chr5 13507037 13507143 -189578389 - AluSq/x SINE Alu -204 109 1 322 314 40 9 chr5 13507321 13507532 -189578000 - LTR38-int LTR ERV1 -4778 2975 2208 2137 311 49 49 chr5 13507936 13509222 -189576310 - LTR38-int LTR ERV1 -5384 1738 453 430 249 77 44 chr5 13509189 13509370 -189576162 - LTR38-int LTR ERV1 -1162 624 438 * 2917 142 15 15 chr5 13509370 13509848 -189575684 + MSTA-int LTR MaLR 1082 1559 -21 936 194 104 36 chr5 13509848 13510159 -189575373 + MSTA LTR MaLR 71 428 0 1956 201 27 12 chr5 13510863 13511277 -189574255 - MSTB LTR MaLR -2 424 5 270 223 115 20 chr5 13511905 13512053 -189573479 - Charlie7 DNA MER1_type 0 2612 2451 517 210 4 4 chr5 13512295 13512534 -189572998 + (TA)n Simple_repeat Simple_repeat 1 239 0 263 304 71 36 chr5 13513115 13513283 -189572249 + L1M4b LINE L1 28 201 -6658 2346 233 48 25 chr5 13513962 13514979 -189570553 + L1M4b LINE L1 1007 2143 -4814 464 238 40 0 chr5 13514993 13515119 -189570413 - L1M4 LINE L1 -1278 4868 4738 355 283 17 0 chr5 13515155 13515275 -189570257 - L1M4 LINE L1 -1578 4568 4447 2338 199 106 42 chr5 13515281 13515996 -189569536 + HERVL74 LTR ERVL 1336 2096 -3589 3122 271 38 43 chr5 13516154 13516721 -189568811 + HERVL74 LTR ERVL 2093 2653 -3032 2369 171 14 18 chr5 13516721 13517155 -189568377 - MSTB1 LTR MaLR 0 432 1 3122 271 38 43 chr5 13517155 13517626 -189567906 + HERVL74 LTR ERVL 2653 3125 -2560 217 322 154 7 chr5 13517872 13518021 -189567511 + MIR SINE MIR 17 187 -75 471 146 24 0 chr5 13518159 13518241 -189567291 - MSTB1 LTR MaLR -348 84 1 1300 256 53 55 chr5 13518241 13518714 -189566818 + HERVL74 LTR ERVL 2654 3125 -2560 490 317 78 9 chr5 13518969 13519199 -189566333 + MIR SINE MIR 17 262 0 2347 139 49 7 chr5 13519231 13519640 -189565892 - MSTA LTR MaLR -2 426 1 218 283 108 54 chr5 13519756 13519922 -189565610 - MIR SINE MIR -14 248 74 1891 132 3 14 chr5 13520573 13520861 -189564671 + AluSp SINE Alu 1 285 -28 368 347 62 27 chr5 13521217 13521442 -189564090 + MIR SINE MIR 30 262 0 2677 179 22 89 chr5 13522277 13523018 -189562514 + LTR8 LTR ERV1 1 691 0 455 98 134 12 chr5 13523631 13523713 -189561819 - MER34 LTR ERV1 0 542 451 * 1440 135 30 0 chr5 13523710 13523947 -189561585 + MER4D LTR ERV1 85 328 -575 44 35 0 0 chr5 13524055 13524113 -189561419 + AT_rich Low_complexity Low_complexity 1 58 0 569 318 125 26 chr5 13526064 13526528 -189559004 - L1ME3A LINE L1 -224 5946 5437 352 297 118 25 chr5 13527156 13527545 -189557987 - L1ME3A LINE L1 -236 5934 5499 684 243 130 7 chr5 13528709 13528985 -189556547 - MER5C DNA MER1_type -14 310 1 22 0 0 0 chr5 13530119 13530141 -189555391 + AT_rich Low_complexity Low_complexity 1 22 0 1612 159 21 17 chr5 13530251 13530540 -189554992 + AluJo SINE Alu 1 290 -22 1850 183 12 52 chr5 13530678 13531083 -189554449 + MLT1B LTR MaLR 1 389 -1 276 30 0 0 chr5 13531618 13531651 -189553881 + (TG)n Simple_repeat Simple_repeat 2 34 0 1376 269 74 42 chr5 13531651 13532149 -189553383 - MLT1E LTR MaLR -24 569 56 5606 169 9 3 chr5 13632664 13633647 -189451885 - L1P LINE L1 -3678 2468 1480 2460 107 26 31 chr5 13633648 13634039 -189451493 + L1PA11 LINE L1 5786 6174 0 646 226 16 45 chr5 13634581 13634929 -189450603 + MLT1C LTR MaLR 1 459 -8 2267 84 40 7 chr5 13635668 13635967 -189449565 + AluSp SINE Alu 1 309 -4 1984 95 21 67 chr5 13637531 13637858 -189447674 - AluSx SINE Alu 0 312 1 234 0 0 0 chr5 13638087 13638113 -189447419 + (CA)n Simple_repeat Simple_repeat 2 27 0 195 42 0 0 chr5 13638162 13638186 -189447346 + (CATA)n Simple_repeat Simple_repeat 2 25 0 306 252 76 50 chr5 13638426 13638545 -189446987 + L1ME LINE L1 5324 5445 -676 774 196 0 0 chr5 13638688 13638841 -189446691 + L1P LINE L1 2662 2814 -3332 2257 126 0 0 chr5 13639235 13639545 -189445987 - AluSx SINE Alu -2 310 1 195 42 0 0 chr5 13639550 13639574 -189445958 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 775 165 0 23 chr5 13639586 13639719 -189445813 - FLAM_C SINE Alu -3 130 1 828 168 8 0 chr5 13639750 13639881 -189445651 + FLAM_C SINE Alu 2 133 0 1524 223 50 17 chr5 13639890 13640289 -189445243 - L1ME2 LINE L1 -10 6154 5734 3739 183 44 39 chr5 13640309 13641127 -189444405 - L1MB4 LINE L1 -1 6179 5358 3103 213 62 14 chr5 13641164 13641900 -189443632 - L1ME2 LINE L1 -9 6155 5384 464 167 0 0 chr5 13643256 13643340 -189442192 - MER5A DNA MER1_type -97 92 9 2103 138 0 3 chr5 13643794 13644092 -189441440 - AluJb SINE Alu -15 297 1 2181 129 0 0 chr5 13644247 13644541 -189440991 - AluSx SINE Alu -18 294 1 21 36 0 0 chr5 13644835 13644863 -189440669 + AT_rich Low_complexity Low_complexity 1 28 0 2352 88 10 0 chr5 13644875 13645170 -189440362 - AluSq SINE Alu -15 298 1 2174 136 0 3 chr5 13645170 13645471 -189440061 - AluSx SINE Alu -12 300 1 237 65 0 0 chr5 13645489 13645520 -189440012 + (A)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr5 13645644 13645684 -189439848 + AT_rich Low_complexity Low_complexity 1 40 0 2257 208 46 17 chr5 13645829 13646348 -189439184 - MLT1F LTR MaLR -8 534 1 2369 116 0 0 chr5 13646496 13646807 -189438725 - AluSq SINE Alu -2 311 1 32 57 0 0 chr5 13647320 13647373 -189438159 + AT_rich Low_complexity Low_complexity 1 53 0 400 107 0 0 chr5 13647432 13647488 -189438044 + Alu SINE Alu 2 57 -253 1545 161 0 50 chr5 13647591 13647914 -189437618 - AluSq SINE Alu -6 307 1 949 270 58 52 chr5 13648057 13648420 -189437112 - MLT1I LTR MaLR -5 404 40 2014 136 0 29 chr5 13648950 13649258 -189436274 + AluSx SINE Alu 1 299 -13 353 200 14 0 chr5 13649799 13649869 -189435663 - MER96 DNA MER1_type? -104 71 1 922 173 146 48 chr5 13649909 13650154 -189435378 + MER33 DNA MER1_type 1 281 -2304 1768 144 47 0 chr5 13650154 13650432 -189435100 + AluJb SINE Alu 1 291 -21 922 173 146 48 chr5 13650432 13650481 -189435051 + MER33 DNA MER1_type 281 324 0 2148 152 0 0 chr5 13650510 13650819 -189434713 + AluSx SINE Alu 1 309 -3 560 311 68 7 chr5 13650829 13651109 -189434423 + L1ME4a LINE L1 5288 5584 -658 1000 171 63 15 chr5 13651141 13651346 -189434186 + MER20 DNA MER1_type 1 215 -4 2128 101 7 0 chr5 13651650 13651951 -189433581 + AluSq SINE Alu 5 307 0 1868 163 83 3 chr5 13653075 13653413 -189432119 - MLT1A1 LTR MaLR 0 365 1 1768 67 0 27 chr5 13654165 13654388 -189431144 - AluY SINE Alu -9 302 86 2240 98 0 3 chr5 13654512 13654798 -189430734 + AluSc SINE Alu 11 295 -14 1617 196 54 39 chr5 13654845 13654874 -189430658 - MLT2D LTR ERVL 0 414 387 324 0 0 0 chr5 13654874 13654910 -189430622 + (TG)n Simple_repeat Simple_repeat 2 37 0 1617 196 54 39 chr5 13654910 13655288 -189430244 - MLT2D LTR ERVL -27 387 1 669 170 0 0 chr5 13655347 13655453 -189430079 - FLAM_C SINE Alu -36 107 2 2323 108 3 0 chr5 13655488 13655784 -189429748 + AluSq SINE Alu 1 297 -16 398 335 23 36 chr5 13656158 13656459 -189429073 + L1ME4a LINE L1 5585 5881 -240 2228 121 10 0 chr5 13657168 13657466 -189428066 + AluSq SINE Alu 1 301 -12 449 189 95 0 chr5 13657685 13657780 -189427752 - MLT1A1 LTR MaLR -2 363 260 * 1181 210 18 18 chr5 13657779 13658060 -189427472 - MLT1A1 LTR MaLR -49 316 36 911 317 136 18 chr5 13658097 13659041 -189426491 + L2 LINE L2 2237 3299 -14 1773 286 163 11 chr5 13661552 13662424 -189423108 - L1MC4a LINE L1 -383 7425 6422 606 230 142 13 chr5 13662430 13662656 -189422876 - LTR37B LTR ERV1 -4 464 210 1198 143 36 41 chr5 13662664 13662982 -189422550 + MLT1A2 LTR MaLR 1 363 -11 189 121 0 0 chr5 13663671 13663704 -189421828 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 644 249 35 0 chr5 13664337 13664506 -189421026 - MLT1A1 LTR MaLR -190 175 1 2253 131 0 0 chr5 13664969 13665312 -189420220 - AluSx SINE Alu 0 343 1 601 246 7 0 chr5 13665711 13665853 -189419679 - MER5A DNA MER1_type -40 149 7 194 289 13 26 chr5 13666511 13666587 -189418945 + L2 LINE L2 3230 3304 -9 340 332 40 15 chr5 13667530 13667732 -189417800 - MLT1L LTR MaLR -221 394 188 2364 89 0 3 chr5 13669073 13669364 -189416168 - AluSq SINE Alu -23 290 1 584 136 32 136 chr5 13669365 13669520 -189416012 - AluJo SINE Alu -169 143 5 196 316 152 38 chr5 13669785 13670101 -189415431 - L2 LINE L2 -337 2977 2626 395 182 0 0 chr5 13670181 13670247 -189415285 - AluJb SINE Alu -177 125 60 382 354 125 12 chr5 13670252 13670846 -189414686 - L2 LINE L2 -787 2527 1867 1026 152 20 50 chr5 13671410 13671608 -189413924 - MER39B LTR ERV1 -28 625 434 1112 141 12 0 chr5 13671609 13671779 -189413753 + AluSg/x SINE Alu 137 308 -4 1834 123 155 37 chr5 13671779 13672160 -189413372 - MER39B LTR ERV1 -227 426 1 3706 165 19 15 chr5 13672332 13673049 -189412483 - MER72 LTR ERV1 -1 721 2 2337 98 0 16 chr5 13673652 13673969 -189411563 - AluSx SINE Alu 0 312 1 2361 100 3 0 chr5 13673979 13674280 -189411252 - AluSc SINE Alu -7 302 1 1916 232 44 3 chr5 13674290 13674944 -189410588 - L1MC3 LINE L1 0 7785 7051 276 278 208 17 chr5 13674955 13675128 -189410404 - MIR SINE MIR -56 206 1 2186 131 13 0 chr5 13675339 13675637 -189409895 - AluSx SINE Alu -10 302 1 1669 182 10 26 chr5 13677211 13677513 -189408019 + AluJo SINE Alu 1 297 -15 757 203 13 48 chr5 13677723 13677950 -189407582 + MER20 DNA MER1_type 1 219 0 342 0 0 0 chr5 13678307 13678345 -189407187 + (CA)n Simple_repeat Simple_repeat 2 39 0 251 261 23 51 chr5 13679892 13680068 -189405464 + (CGCGG)n Simple_repeat Simple_repeat 4 174 0 251 261 23 51 chr5 13680233 13680409 -189405123 + (CGCGG)n Simple_repeat Simple_repeat 4 174 0 927 194 0 7 chr5 13680604 13680896 -189404636 + (CAT)n Simple_repeat Simple_repeat 1 290 0 639 181 0 53 chr5 13680900 13681088 -189404444 + (CACCAT)n Simple_repeat Simple_repeat 2 179 0 416 250 276 0 chr5 13681120 13681272 -189404260 - MIR SINE MIR -11 251 58 776 295 86 35 chr5 13681884 13682315 -189403217 + MLT1J LTR MaLR 17 469 -42 485 340 25 0 chr5 13682316 13682475 -189403057 + MIR SINE MIR 5 167 -95 226 234 0 0 chr5 13682566 13682613 -189402919 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1880 162 3 3 chr5 13682778 13683068 -189402464 + AluJb SINE Alu 1 290 -22 714 279 122 20 chr5 13683789 13684083 -189401449 + MER77 LTR ERV1 275 598 -7 1747 113 52 78 chr5 13685125 13685471 -189400061 - MER1B DNA MER1_type 0 337 1 39 60 0 0 chr5 13686854 13686921 -189398611 + AT_rich Low_complexity Low_complexity 1 67 0 277 220 93 34 chr5 13687829 13687947 -189397585 - MIR SINE MIR -115 147 23 354 341 153 27 chr5 13688211 13688545 -189396987 - L2 LINE L2 -416 2898 2523 1105 247 78 13 chr5 13688707 13689079 -189396453 + LTR53 LTR ERVL 94 489 -30 486 181 11 60 chr5 13689137 13689177 -189396355 - MER5A DNA MER1_type -68 110 70 1079 246 68 42 chr5 13689177 13689632 -189395900 + MLT1C LTR MaLR 1 467 0 486 181 11 60 chr5 13689632 13689715 -189395817 - MER5A DNA MER1_type -108 70 4 225 236 47 75 chr5 13691477 13691689 -189393843 + L1MC4a LINE L1 5038 5243 -903 2243 88 58 0 chr5 13691738 13692033 -189393499 + AluSx SINE Alu 1 312 0 368 269 62 56 chr5 13692054 13692214 -189393318 + L1MC4a LINE L1 5287 5447 -2361 451 336 64 26 chr5 13692219 13692531 -189393001 + L1MC4a LINE L1 5505 5828 -1980 223 83 21 42 chr5 13700836 13700884 -189384648 + (CCCCAG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 13701175 13701204 -189384328 + GC_rich Low_complexity Low_complexity 1 29 0 1364 148 76 0 chr5 13701924 13702160 -189383372 - AluJo SINE Alu -58 254 1 2473 72 3 0 chr5 13702238 13702531 -189383001 - AluSp SINE Alu -19 294 1 2081 170 3 27 chr5 13703003 13703379 -189382153 + MLT2C1 LTR ERVL 1 367 -30 2096 117 3 17 chr5 13703600 13703899 -189381633 + AluSx SINE Alu 1 295 -17 1087 166 47 14 chr5 13704936 13705147 -189380385 - MER20 DNA MER1_type 0 219 2 308 177 29 56 chr5 13705414 13705532 -189380000 + MLT1L LTR MaLR 389 607 -8 432 236 73 48 chr5 13706033 13706198 -189379334 + LTR16C LTR ERVL 300 468 -23 2388 102 0 13 chr5 13707162 13707475 -189378057 - AluSx SINE Alu -3 309 1 1069 186 28 19 chr5 13707589 13707804 -189377728 + MER20 DNA MER1_type 1 217 -2 2282 127 0 0 chr5 13707806 13708114 -189377418 + AluSg SINE Alu 1 308 -2 433 308 58 2 chr5 13708303 13708547 -189376985 - MIR SINE MIR 0 262 8 336 270 58 87 chr5 13709339 13709480 -189376052 + L1MD3 LINE L1 7564 7697 -298 2463 81 7 0 chr5 13709480 13709789 -189375743 + AluSx SINE Alu 1 311 -1 336 270 58 87 chr5 13709789 13709888 -189375644 + L1MD3 LINE L1 7697 7797 -198 1420 199 76 6 chr5 13709936 13710277 -189375255 + MLT1A1 LTR MaLR 1 365 0 274 250 11 65 chr5 13710444 13710536 -189374996 - MIR SINE MIR -52 210 124 222 280 97 0 chr5 13711913 13712006 -189373526 - L2 LINE L2 -12 3260 3159 347 167 0 17 chr5 13712608 13712668 -189372864 - MER20 DNA MER1_type -160 59 1 1862 187 11 11 chr5 13713198 13713562 -189371970 + MLT2D LTR ERVL 6 369 -45 198 0 0 0 chr5 13713598 13713620 -189371912 + (CA)n Simple_repeat Simple_repeat 2 23 0 221 0 0 33 chr5 13713783 13713813 -189371719 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 214 256 39 51 chr5 13715865 13715943 -189369589 + MIR SINE MIR 95 171 -91 227 303 30 15 chr5 13717259 13717325 -189368207 + MIR SINE MIR 26 92 -170 3517 145 55 66 chr5 13717332 13718145 -189367387 - L1MB8 LINE L1 -6 6172 5369 1594 224 46 30 chr5 13718541 13719001 -189366531 + MLT1C LTR MaLR 1 467 0 1887 155 24 0 chr5 13724369 13724665 -189360867 - AluJo SINE Alu -9 303 1 375 268 89 40 chr5 13725049 13725273 -189360259 - L1ME4a LINE L1 -83 6038 5804 13896 117 31 18 chr5 13726487 13728442 -189357090 + Tigger1 DNA MER2_type 6 2067 -351 2196 137 0 13 chr5 13728442 13728757 -189356775 - AluSx SINE Alu -1 311 1 13896 117 31 18 chr5 13728757 13729114 -189356418 + Tigger1 DNA MER2_type 2067 2418 0 3600 168 58 30 chr5 13730865 13731574 -189353958 - L1MB3 LINE L1 -32 6151 5423 302 242 53 0 chr5 13732709 13732804 -189352728 - Charlie5 DNA MER1_type -102 2510 2411 344 243 243 5 chr5 13733050 13733239 -189352293 - L3 LINE CR1 -283 1294 1061 297 75 0 0 chr5 13733655 13733695 -189351837 + (CA)n Simple_repeat Simple_repeat 2 41 0 341 321 78 55 chr5 13733988 13734206 -189351326 - MIR SINE MIR -1 261 39 351 338 63 0 chr5 13734769 13734911 -189350621 + MIR SINE MIR 22 172 -90 279 79 0 0 chr5 13734926 13734964 -189350568 + (CA)n Simple_repeat Simple_repeat 1 38 0 270 293 123 0 chr5 13737049 13737155 -189348377 + MIR SINE MIR 106 224 -38 225 0 0 0 chr5 13738824 13738849 -189346683 + (A)n Simple_repeat Simple_repeat 1 25 0 2296 138 122 9 chr5 13739290 13739716 -189345816 - MER101 LTR ERV1 0 474 1 264 59 0 0 chr5 13739717 13739751 -189345781 + (CCTA)n Simple_repeat Simple_repeat 2 35 0 183 343 14 0 chr5 13741183 13741253 -189344279 - L2 LINE L2 -5 3308 3238 24 0 0 0 chr5 13742106 13742130 -189343402 + AT_rich Low_complexity Low_complexity 1 24 0 352 242 11 11 chr5 13742255 13742350 -189343182 - MER94 DNA DNA 0 134 40 202 304 18 0 chr5 13742699 13742755 -189342777 + L2 LINE L2 3201 3257 -15 1011 232 49 1 chr5 13744655 13744950 -189340582 - MER46C DNA MER2_type -11 327 22 365 240 88 0 chr5 13745580 13745705 -189339827 - MER103 DNA DNA -7 159 24 855 295 33 0 chr5 13746781 13747022 -189338510 - MIR SINE MIR 0 262 14 264 270 5 63 chr5 13748091 13748280 -189337252 + (GTGTG)n Simple_repeat Simple_repeat 1 178 0 243 161 21 140 chr5 13748755 13748848 -189336684 + MER112 DNA MER1_type 2 83 -177 728 169 0 6 chr5 13748851 13749011 -189336521 + (CA)n Simple_repeat Simple_repeat 2 160 0 311 271 0 0 chr5 13749095 13749165 -189336367 + MER112 DNA MER1_type 183 252 -8 311 277 122 34 chr5 13750417 13750565 -189334967 + MER5A DNA MER1_type 20 180 -9 210 345 35 0 chr5 13750842 13750929 -189334603 - MIR SINE MIR -63 145 56 2254 145 26 0 chr5 13752529 13752881 -189332651 + MLT1B LTR MaLR 30 390 0 246 293 0 61 chr5 13753543 13753564 -189331968 + Charlie4 DNA MER1_type 44 65 -1896 330 87 0 0 chr5 13753564 13753610 -189331922 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 246 293 0 61 chr5 13753610 13753687 -189331845 + Charlie4 DNA MER1_type 65 136 -1825 301 284 58 8 chr5 13754076 13754215 -189331317 - MIR SINE MIR -61 147 12 907 230 104 77 chr5 13754681 13755046 -189330486 + Charlie4a DNA MER1_type 2 376 -132 2353 132 43 31 chr5 13755162 13755585 -189329947 + MSTA LTR MaLR 1 428 0 3086 76 25 36 chr5 13756925 13757374 -189328158 + MLT2A1 LTR ERVL 1 444 0 6856 62 7 2 chr5 13757374 13758224 -189327308 + HERVL-A1 LTR ERVL 1 854 -4800 * 19709 72 2 1 chr5 13758223 13760638 -189324894 + HERVL-A1 LTR ERVL 1462 3879 -1775 444 80 93 40 chr5 13760654 13760729 -189324803 + HERVL-A1 LTR ERVL 205 283 -5371 * 1234 72 0 0 chr5 13760726 13760878 -189324654 - HERVL LTR ERVL -2109 3545 3394 * 14079 67 19 8 chr5 13760877 13762649 -189322883 + HERVL-A1 LTR ERVL 3865 5654 0 2866 92 25 10 chr5 13762649 13763042 -189322490 + MLT2A1 LTR ERVL 1 399 -45 390 204 45 9 chr5 13763054 13763165 -189322367 - L1MCa LINE L1 -1339 6983 1995 371 237 54 0 chr5 13763065 13763177 -189322355 + L1MC4 LINE L1 6571 6646 -1139 * 186 324 95 0 chr5 13763882 13763956 -189321576 - MIR SINE MIR -105 103 23 194 208 75 0 chr5 13765005 13765058 -189320474 - MIR SINE MIR -125 137 81 284 291 122 58 chr5 13766297 13766486 -189319046 + MIR SINE MIR 14 214 -48 346 271 205 7 chr5 13766907 13767058 -189318474 + MER5A DNA MER1_type 2 182 -7 374 280 88 102 chr5 13767216 13767738 -189317794 - LTR40b LTR ERVL -2 460 3 182 258 76 91 chr5 13768080 13768278 -189317254 - L2 LINE L2 -808 2506 2312 2137 131 6 50 chr5 13768284 13768644 -189316888 + MER2 DNA MER2_type 1 344 0 200 205 0 0 chr5 13769355 13769394 -189316138 + GA-rich Low_complexity Low_complexity 1 39 0 361 349 47 31 chr5 13770626 13770818 -189314714 + L2 LINE L2 3119 3313 0 344 243 168 23 chr5 13772219 13772392 -189313140 + MLT1L LTR MaLR 178 375 -240 2912 172 61 19 chr5 13772717 13773305 -189312227 - L1MB5 LINE L1 0 6174 5562 2778 161 36 6 chr5 13773333 13773695 -189311837 - L1MB2 LINE L1 -3 6168 5784 474 18 0 0 chr5 13773695 13773750 -189311782 + (TG)n Simple_repeat Simple_repeat 2 56 0 2778 161 36 6 chr5 13773750 13773908 -189311624 - L1MB2 LINE L1 -387 5784 5632 233 280 149 47 chr5 13773989 13774096 -189311436 + MIR3 SINE MIR 88 205 -3 279 159 14 29 chr5 13775387 13775456 -189310076 + Charlie7 DNA MER1_type 83 150 -2462 972 215 85 38 chr5 13775682 13776022 -189309510 + Charlie7 DNA MER1_type 366 721 -1891 475 209 73 47 chr5 13776015 13776206 -189309326 + Charlie7 DNA MER1_type 2417 2612 0 * 1949 177 88 18 chr5 13776407 13776841 -189308691 + MLT1C LTR MaLR 1 464 -3 2238 99 3 3 chr5 13777606 13777918 -189307614 + AluSx SINE Alu 1 312 0 2819 221 67 54 chr5 13778271 13778289 -189307243 + L1MC4 LINE L1 7163 7179 -606 2190 155 52 47 chr5 13778289 13778754 -189306778 + MLT1C LTR MaLR 1 467 0 2819 221 67 54 chr5 13778754 13779463 -189306069 + L1MC4 LINE L1 7179 7641 -144 2261 100 0 0 chr5 13779463 13779773 -189305759 + AluY SINE Alu 1 310 -1 2819 221 67 54 chr5 13779773 13779920 -189305612 + L1MC4 LINE L1 7641 7785 0 1567 278 118 50 chr5 13780132 13780330 -189305202 + L1MCc LINE L1 1012 1195 -5927 297 0 0 0 chr5 13780330 13780363 -189305169 + (CA)n Simple_repeat Simple_repeat 1 33 0 1567 278 118 50 chr5 13780363 13781504 -189304028 + L1MCc LINE L1 1195 2642 -4480 727 204 22 113 chr5 13781504 13781611 -189303921 - MER63A DNA MER1_type -1478 210 134 1723 171 0 7 chr5 13781611 13781903 -189303629 + AluJb SINE Alu 1 290 -22 727 204 22 113 chr5 13781903 13782025 -189303507 - MER63A DNA MER1_type -1554 134 2 1567 278 118 50 chr5 13782025 13782161 -189303371 + L1MCc LINE L1 2642 2767 -4355 232 175 0 0 chr5 13782165 13782205 -189303327 - MER58 DNA MER1_type -3 2417 2378 837 231 29 63 chr5 13782206 13782444 -189303088 - MER82 DNA MER2_type 0 653 424 4205 211 47 75 chr5 13782450 13782795 -189302737 - L1MC4a LINE L1 -551 7257 6904 2092 99 27 0 chr5 13782795 13783089 -189302443 + AluSq SINE Alu 1 302 -11 4205 211 47 75 chr5 13783089 13783467 -189302065 - L1MC4a LINE L1 -904 6904 6517 309 51 0 0 chr5 13783467 13783506 -189302026 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 4205 211 47 75 chr5 13783506 13784102 -189301430 - L1MC4a LINE L1 -1291 6517 5974 427 318 95 14 chr5 13785149 13785360 -189300172 + MIR SINE MIR 18 245 -17 319 273 28 128 chr5 13785365 13785654 -189299878 + MIR SINE MIR 3 262 0 298 272 117 0 chr5 13786439 13786542 -189298990 + MER46C DNA MER2_type 1 115 -223 256 211 135 0 chr5 13786594 13786646 -189298886 + MER46C DNA MER2_type 194 252 -86 2150 108 0 3 chr5 13786865 13787170 -189298362 - AluSx SINE Alu -6 306 3 325 322 54 13 chr5 13787489 13787638 -189297894 + MIR SINE MIR 48 202 -60 3602 191 56 3 chr5 13789354 13790103 -189295429 - L1MB7 LINE L1 -1 6183 5395 321 326 34 7 chr5 13790140 13790287 -189295245 + MER103 DNA DNA 16 166 0 180 0 0 0 chr5 13790287 13790307 -189295225 + (T)n Simple_repeat Simple_repeat 1 20 0 180 344 120 8 chr5 13790421 13790546 -189294986 + MIR SINE MIR 45 183 -79 642 305 147 32 chr5 13791072 13791666 -189293866 - L1MEd LINE L1 -5108 1011 350 1746 178 39 21 chr5 13792111 13792494 -189293038 + MLT1B LTR MaLR 1 390 0 274 200 27 80 chr5 13793106 13793181 -189292351 + MIR SINE MIR 2 72 -136 231 257 0 0 chr5 13793181 13793255 -189292277 + (TG)n Simple_repeat Simple_repeat 1 74 0 563 278 50 22 chr5 13793255 13793435 -189292097 + MIR SINE MIR 78 262 0 252 225 0 70 chr5 13795463 13795534 -189289998 + MLT1D LTR MaLR 44 109 -517 1954 140 48 70 chr5 13795581 13795995 -189289537 + MLT1D LTR MaLR 98 502 -3 267 140 53 18 chr5 13796155 13796212 -189289320 + MLT1J2 LTR MaLR 369 427 -23 1713 167 27 10 chr5 13796408 13796701 -189288831 + AluJb SINE Alu 1 298 -14 2072 122 3 3 chr5 13797822 13798116 -189287416 - AluSq SINE Alu -19 294 1 231 203 47 0 chr5 13798173 13798237 -189287295 + MIR SINE MIR 182 248 -14 21 0 0 0 chr5 13798749 13798770 -189286762 + AT_rich Low_complexity Low_complexity 1 21 0 185 269 0 45 chr5 13799210 13799277 -189286255 - MIR3 SINE MIR -53 155 92 1926 118 15 0 chr5 13799480 13799743 -189285789 + AluSx SINE Alu 34 300 -12 2259 103 0 13 chr5 13800287 13800597 -189284935 - AluSx SINE Alu -6 306 1 29 47 0 0 chr5 13801460 13801503 -189284029 + GC_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr5 13801723 13801753 -189283779 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 13801779 13801802 -189283730 + GC_rich Low_complexity Low_complexity 1 23 0 303 28 0 0 chr5 13801929 13801965 -189283567 + (CGGGGG)n Simple_repeat Simple_repeat 1 36 0 220 283 33 0 chr5 13801965 13802025 -189283507 + G-rich Low_complexity Low_complexity 5 66 0 2473 151 121 29 chr5 13802384 13802939 -189282593 + MER4B LTR ERV1 1 606 -4 575 287 106 56 chr5 13803117 13803618 -189281914 + L2 LINE L2 1755 2280 -1034 226 237 0 51 chr5 13803853 13803912 -189281620 + HsTC2 DNA Tc2 95 150 -1748 779 221 32 40 chr5 13803999 13804248 -189281284 + HsTC2 DNA Tc2 1647 1893 -5 3992 135 44 44 chr5 13804421 13805130 -189280402 + MER50 LTR ERV1 3 711 -23 471 305 60 60 chr5 13805351 13805702 -189279830 + MLT1J LTR MaLR 94 444 -67 584 278 188 39 chr5 13805762 13805908 -189279624 + L2 LINE L2 2791 2914 -399 1739 183 65 3 chr5 13805908 13806231 -189279301 + MER61A LTR ERV1 1 343 0 584 278 188 39 chr5 13806231 13806504 -189279028 + L2 LINE L2 2914 3298 -15 1410 170 0 44 chr5 13807082 13807353 -189278179 - AluSx SINE Alu 0 312 54 325 267 19 29 chr5 13807477 13807582 -189277950 + MIR SINE MIR 84 187 -75 2104 140 81 21 chr5 13808026 13808398 -189277134 + MSTD LTR MaLR 3 396 0 210 224 0 0 chr5 13808627 13808676 -189276856 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 68 0 0 chr5 13809387 13809431 -189276101 + AT_rich Low_complexity Low_complexity 1 44 0 230 272 0 43 chr5 13809464 13809556 -189275976 - L1ME4a LINE L1 -64 6057 5970 568 198 62 68 chr5 13809593 13809770 -189275762 - L1MC3 LINE L1 -362 7423 7248 994 211 0 5 chr5 13810859 13811063 -189274469 + MLT2D LTR ERVL 1 203 -211 287 152 14 0 chr5 13811069 13811143 -189274389 + MLT2D LTR ERVL 321 445 -19 280 98 0 5 chr5 13811148 13811160 -189274372 + MLT2C1 LTR ERVL 358 369 -28 351 0 0 0 chr5 13811160 13811199 -189274333 + (CA)n Simple_repeat Simple_repeat 1 39 0 280 98 0 5 chr5 13811199 13811237 -189274295 + MLT2C1 LTR ERVL 369 395 -2 1105 189 77 6 chr5 13811875 13812198 -189273334 - L1MB1 LINE L1 0 6168 5733 259 226 216 10 chr5 13812670 13812772 -189272760 - L2 LINE L2 -1 3312 3190 926 237 37 0 chr5 13813107 13813322 -189272210 + MER58A DNA MER1_type 1 223 -1 854 208 38 6 chr5 13813331 13813514 -189272018 + MER5A DNA MER1_type 1 189 0 867 245 42 0 chr5 13814787 13814999 -189270533 + MER58A DNA MER1_type 4 224 0 2270 85 0 0 chr5 13815222 13815527 -189270005 - AluY SINE Alu 0 305 1 512 288 45 5 chr5 13816864 13817065 -189268467 + MIR SINE MIR 33 240 -22 527 316 0 37 chr5 13817711 13817898 -189267634 + (CA)n Simple_repeat Simple_repeat 1 180 0 647 265 11 42 chr5 13818087 13818276 -189267256 + MER63A DNA MER1_type 14 196 -14 195 313 52 42 chr5 13819607 13819703 -189265829 - MIR SINE MIR -74 134 38 3733 199 60 7 chr5 13819760 13820515 -189265017 + L1M2b LINE L1 1 795 -6414 27274 80 5 7 chr5 13820520 13821772 -189263760 + L1P LINE L1 31 1284 -4862 2482 72 0 0 chr5 13821772 13822065 -189263467 - AluY SINE Alu -18 293 1 27274 80 5 7 chr5 13822065 13824407 -189261125 + L1P LINE L1 1284 3617 -2529 1875 24 0 0 chr5 13824404 13824613 -189260919 - L1P LINE L1 -1891 4255 4047 * 642 53 0 0 chr5 13824614 13824690 -189260842 - AluY SINE Alu -161 150 75 1006 132 13 0 chr5 13824690 13824842 -189260690 + L1MA5 LINE L1 5514 5667 -636 1161 191 65 0 chr5 13824844 13825059 -189260473 + AluJo SINE Alu 59 287 -25 474 18 0 0 chr5 13825059 13825114 -189260418 + (CA)n Simple_repeat Simple_repeat 2 56 0 3512 155 18 8 chr5 13825115 13825728 -189259804 + L1MA5 LINE L1 5656 6274 -26 390 252 0 10 chr5 13826042 13826145 -189259387 + MIR SINE MIR 54 155 -107 423 163 175 50 chr5 13826246 13826406 -189259126 + MER104 DNA MER2_type 1 180 0 609 194 25 50 chr5 13826726 13826886 -189258646 - MER106B DNA MER1_type 0 1059 904 263 156 22 0 chr5 13826942 13826987 -189258545 - MER106B DNA MER1_type -1012 47 2 1396 131 0 0 chr5 13827882 13828081 -189257451 + AluSg/x SINE Alu 111 309 -3 2248 93 0 0 chr5 13828612 13828890 -189256642 - AluSx SINE Alu -34 278 1 244 343 18 41 chr5 13829472 13829641 -189255891 + MIR SINE MIR 48 212 -50 1269 272 115 29 chr5 13830245 13830609 -189254923 - MLT1L LTR MaLR -5 610 180 1642 187 169 26 chr5 13830609 13830679 -189254853 - MLT2B1 LTR ERVL 0 520 461 180 77 0 0 chr5 13830679 13830705 -189254827 + (TG)n Simple_repeat Simple_repeat 2 27 0 1642 187 169 26 chr5 13830705 13831089 -189254443 - MLT2B1 LTR ERVL -59 461 1 1269 272 115 29 chr5 13831089 13831282 -189254250 - MLT1L LTR MaLR -435 180 5 255 352 0 0 chr5 13831342 13831430 -189254102 - MIR SINE MIR -5 257 170 23 0 0 0 chr5 13831733 13831756 -189253776 + AT_rich Low_complexity Low_complexity 1 23 0 2130 156 18 8 chr5 13832186 13832571 -189252961 + MLT1B LTR MaLR 2 390 0 187 293 43 86 chr5 13832685 13832965 -189252567 + L2 LINE L2 2825 3092 -180 2317 201 122 29 chr5 13832975 13833547 -189251985 + MER50 LTR ERV1 10 654 -80 2234 121 0 0 chr5 13833547 13833852 -189251680 - AluSc SINE Alu -4 305 1 2317 201 122 29 chr5 13833852 13833942 -189251590 + MER50 LTR ERV1 654 734 0 203 176 0 0 chr5 13834878 13834912 -189250620 + T-rich Low_complexity Low_complexity 1 34 0 257 287 90 42 chr5 13835394 13835561 -189249971 - LTR16A1 LTR ERVL -13 444 270 287 190 130 60 chr5 13835765 13835811 -189249721 - MER58C DNA MER1_type -2223 197 156 2183 121 32 27 chr5 13835811 13836184 -189249348 + THE1C LTR MaLR 1 375 0 287 190 130 60 chr5 13836184 13836237 -189249295 - MER58C DNA MER1_type -2264 156 91 1715 257 95 55 chr5 13836283 13836467 -189249065 - L1MC5 LINE L1 -752 7209 7034 1336 201 15 96 chr5 13836467 13836864 -189248668 - MLT1A1 LTR MaLR 0 365 1 1715 257 95 55 chr5 13836864 13837025 -189248507 - L1MC5 LINE L1 -927 7034 6881 2401 139 27 61 chr5 13837025 13837499 -189248033 - L1MB8 LINE L1 0 6178 5721 1715 257 95 55 chr5 13837499 13838673 -189246859 - L1MC5 LINE L1 -1080 6881 5612 1059 192 25 70 chr5 13838713 13838999 -189246533 - L1MC5 LINE L1 -770 7191 6919 526 301 62 49 chr5 13839001 13840001 -189245531 - L1MC5 LINE L1 -743 5403 4431 373 202 219 0 chr5 13840897 13841011 -189244521 - L2 LINE L2 0 3313 3175 940 87 16 0 chr5 13841157 13841284 -189244248 + AluSg/x SINE Alu 174 302 -8 633 232 10 63 chr5 13841671 13841878 -189243654 - L2 LINE L2 -427 2887 2692 330 236 34 22 chr5 13841911 13842000 -189243532 - MIR SINE MIR -150 112 23 22 56 0 0 chr5 13842042 13842078 -189243454 + AT_rich Low_complexity Low_complexity 1 36 0 209 286 98 90 chr5 13842143 13842276 -189243256 - L2 LINE L2 -1 3271 3138 196 228 0 70 chr5 13843528 13843585 -189241947 - L2 LINE L2 0 3313 3261 2323 91 3 0 chr5 13844024 13844321 -189241211 - AluSp SINE Alu -15 298 1 14584 116 25 8 chr5 13844924 13847131 -189238401 + Tigger1 DNA MER2_type 1 2242 -176 2483 74 0 0 chr5 13847131 13847429 -189238103 + AluY SINE Alu 1 298 -13 14584 116 25 8 chr5 13847429 13847609 -189237923 + Tigger1 DNA MER2_type 2242 2418 0 259 233 0 33 chr5 13847617 13847677 -189237855 + HsTC2 DNA Tc2 33 90 -1808 221 319 77 0 chr5 13848236 13848327 -189237205 - L2 LINE L2 -12 3260 3163 23 33 0 0 chr5 13849308 13849338 -189236194 + AT_rich Low_complexity Low_complexity 1 30 0 2163 118 0 0 chr5 13850256 13850545 -189234987 - AluSx SINE Alu -2 310 22 352 250 5 162 chr5 13851785 13852001 -189233531 - MIR3 SINE MIR -8 200 19 23386 177 29 22 chr5 13852475 13858647 -189226885 + L1PA11 LINE L1 287 6486 -3 199 315 212 7 chr5 13859191 13859337 -189226195 - MIR3 SINE MIR -8 200 25 788 163 105 17 chr5 13859442 13859614 -189225918 + MER20 DNA MER1_type 33 219 0 567 321 83 18 chr5 13859630 13859848 -189225684 + MIR SINE MIR 28 259 -3 18307 197 15 12 chr5 13859879 13864466 -189221066 - L1PA13 LINE L1 -1374 5423 808 6231 216 41 29 chr5 13864569 13866006 -189219526 - L1PA13 LINE L1 -5333 1454 1 278 282 66 18 chr5 13866081 13866308 -189219224 - HAL1 LINE L1 -1385 1122 885 5153 176 14 7 chr5 13866311 13867357 -189218175 + L1 LINE L1 786 5403 -743 1052 235 238 8 chr5 13867616 13867994 -189217538 + LTR50 LTR ERVL 1 465 -330 1863 230 126 26 chr5 13868052 13868591 -189216941 + MLT1E LTR MaLR 1 593 0 437 332 92 18 chr5 13868625 13868908 -189216624 - L1MEd LINE L1 -5758 361 58 289 296 130 0 chr5 13869908 13870016 -189215516 - MIR SINE MIR -70 192 71 3608 162 30 2 chr5 13870075 13870681 -189214851 - L1PB4 LINE L1 -5 6151 5529 1086 213 79 136 chr5 13870983 13871527 -189214005 - L1ME3A LINE L1 -5 6165 5653 21 57 0 0 chr5 13871755 13871790 -189213742 + AT_rich Low_complexity Low_complexity 1 35 0 2247 109 3 0 chr5 13871797 13872091 -189213441 + AluSx SINE Alu 1 295 -17 257 51 26 0 chr5 13872091 13872130 -189213402 + (TA)n Simple_repeat Simple_repeat 2 41 0 2367 95 10 0 chr5 13872311 13872616 -189212916 - AluSx SINE Alu -4 308 1 529 321 71 12 chr5 13873484 13873724 -189211808 + MIR SINE MIR 7 260 -2 859 227 54 111 chr5 13873825 13874195 -189211337 - MLT1A2 LTR MaLR -3 371 23 203 271 24 47 chr5 13874334 13874419 -189211113 - MIR SINE MIR -74 134 52 1518 171 60 21 chr5 13875427 13875708 -189209824 - AluJo SINE Alu -8 304 13 270 318 0 0 chr5 13875752 13875837 -189209695 - MIR SINE MIR -6 256 172 2396 92 3 0 chr5 13876893 13877196 -189208336 + AluSp SINE Alu 1 304 -9 1700 120 0 0 chr5 13977599 13977833 -189107699 + AluSx SINE Alu 63 296 -16 290 289 12 0 chr5 13977987 13978070 -189107462 - MER81 DNA DNA -29 85 2 227 291 45 62 chr5 13978234 13978413 -189107119 - L1MC/D LINE L1 -1979 5829 5654 * 2152 256 56 21 chr5 13978408 13978971 -189106561 - L1ME LINE L1 -348 5816 5197 1869 179 19 16 chr5 13978971 13979335 -189106197 + MLT1A1 LTR MaLR 1 365 0 2152 256 56 21 chr5 13979335 13979752 -189105780 - L1ME LINE L1 -967 5197 4796 385 270 55 98 chr5 13982127 13982192 -189103340 - MER110 LTR ERV1 -4 487 421 2352 199 26 59 chr5 13982192 13982764 -189102768 - MLT2B3 LTR ERVL 0 554 2 385 270 55 98 chr5 13982764 13983005 -189102527 - MER110 LTR ERV1 -70 421 194 347 243 171 7 chr5 13983102 13983242 -189102290 - MER110A LTR ERV1 -298 170 8 276 330 103 27 chr5 13983429 13983574 -189101958 - MIR SINE MIR -13 249 86 1636 179 127 21 chr5 13983574 13983992 -189101540 + MER31B LTR ERV1 5 466 0 276 330 103 27 chr5 13983992 13984031 -189101501 - MIR SINE MIR -176 86 51 183 218 0 0 chr5 13984816 13984871 -189100661 + (TTCA)n Simple_repeat Simple_repeat 4 58 0 3032 131 51 29 chr5 13985174 13985760 -189099772 + L1MA8 LINE L1 5690 6288 -3 794 191 125 0 chr5 13987259 13987427 -189098105 - MER20 DNA MER1_type 0 219 31 452 249 52 58 chr5 13987604 13987777 -189097755 - MER5B DNA MER1_type -3 175 4 1761 76 0 5 chr5 13987990 13988214 -189097318 + AluSp SINE Alu 85 307 -6 1012 239 56 54 chr5 13988512 13989012 -189096520 + L1MEc LINE L1 2100 2546 -3669 3429 41 4 82 chr5 13989179 13989665 -189095867 + L1PA7 LINE L1 5707 6154 0 294 279 54 0 chr5 13989668 13989797 -189095735 + L1MDa LINE L1 2305 2440 -4100 2121 104 7 0 chr5 13990540 13990818 -189094714 + AluSq SINE Alu 4 283 -30 207 100 0 0 chr5 13991343 13991373 -189094159 + (T)n Simple_repeat Simple_repeat 1 30 0 409 188 46 151 chr5 13991643 13991861 -189093671 - MIR SINE MIR -10 252 58 478 196 20 72 chr5 13991892 13991948 -189093584 + L1MDa LINE L1 2734 2791 -3749 2403 129 22 0 chr5 13991948 13992304 -189093228 - THE1B LTR MaLR 0 364 1 478 196 20 72 chr5 13992304 13992400 -189093132 + L1MDa LINE L1 2791 2878 -3662 277 247 286 0 chr5 13992543 13992697 -189092835 - MIR SINE MIR -15 247 50 284 349 88 5 chr5 13992800 13992992 -189092540 - MIR SINE MIR -8 254 47 1545 206 142 5 chr5 13993228 13993664 -189091868 - LTR54B LTR ERV1 -2 496 1 467 221 68 55 chr5 13993934 13993978 -189091554 - L1ME3A LINE L1 -8 6162 6120 2383 121 11 35 chr5 13993978 13994351 -189091181 - THE1B LTR MaLR 0 364 1 467 221 68 55 chr5 13994351 13994469 -189091063 - L1ME3A LINE L1 -50 6120 5998 2350 86 7 0 chr5 13995376 13995666 -189089866 + AluSc SINE Alu 1 292 -17 1889 184 28 31 chr5 13996195 13996586 -189088946 + MLT1B LTR MaLR 1 390 0 186 43 0 0 chr5 13996854 13996877 -189088655 + (TTG)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr5 13996943 13996964 -189088568 + AT_rich Low_complexity Low_complexity 1 21 0 541 157 17 0 chr5 13997112 13997227 -189088305 + (TA)n Simple_repeat Simple_repeat 1 117 0 207 0 0 0 chr5 13999336 13999359 -189086173 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 479 311 68 0 chr5 13999938 14000099 -189085433 + MIR SINE MIR 35 206 -56 909 108 23 0 chr5 14000104 14000234 -189085298 - AluSq/x SINE Alu -179 133 1 2120 117 0 41 chr5 14000238 14000555 -189084977 - AluSg SINE Alu -6 304 1 377 234 52 73 chr5 14001169 14001361 -189084171 + L2 LINE L2 3126 3313 0 1889 108 7 54 chr5 14002029 14002171 -189083361 - MLT2A2 LTR ERVL -170 283 161 2010 134 28 0 chr5 14002171 14002462 -189083070 + AluSx SINE Alu 1 299 -13 1889 108 7 54 chr5 14002462 14002616 -189082916 - MLT2A2 LTR ERVL -292 161 1 1677 179 100 39 chr5 14003234 14003643 -189081889 - Tigger2a DNA MER2_type 0 434 1 296 347 92 34 chr5 14004453 14004715 -189080817 - L2 LINE L2 -2 3270 2994 475 302 157 15 chr5 14005147 14005415 -189080117 - L2 LINE L2 -3 3310 3005 239 217 0 0 chr5 14005447 14005493 -189080039 - L2 LINE L2 -660 2654 2609 1502 160 81 138 chr5 14006359 14006852 -189078680 + MER4C LTR ERV1 1 465 0 21 57 0 0 chr5 14006884 14006919 -189078613 + AT_rich Low_complexity Low_complexity 1 35 0 202 350 67 17 chr5 14009685 14009805 -189075727 - L2 LINE L2 0 3272 3147 328 283 43 0 chr5 14009836 14009928 -189075604 + MIR SINE MIR 59 154 -108 276 338 114 27 chr5 14009945 14010164 -189075368 + L3 LINE CR1 1259 1496 -81 261 309 73 44 chr5 14010260 14010396 -189075136 - L2 LINE L2 -5 3308 3169 22 0 0 0 chr5 14010744 14010766 -189074766 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr5 14010794 14010820 -189074712 + (TTTAA)n Simple_repeat Simple_repeat 5 30 0 405 272 112 42 chr5 14012174 14012558 -189072974 + L1MB2 LINE L1 3566 3980 -2166 281 300 49 38 chr5 14012744 14013011 -189072521 + L1MB2 LINE L1 4110 4379 -1767 236 287 50 30 chr5 14013015 14013116 -189072416 - L1ME3A LINE L1 -88 6082 5980 1520 151 52 66 chr5 14013178 14013272 -189072260 + AluJo SINE Alu 1 95 -217 2375 133 30 25 chr5 14013272 14013634 -189071898 + THE1B LTR MaLR 1 364 0 1520 151 52 66 chr5 14013634 14013844 -189071688 + AluJo SINE Alu 95 301 -11 267 316 46 17 chr5 14013901 14014075 -189071457 - L1ME3A LINE L1 -248 5922 5744 813 164 0 15 chr5 14014721 14014855 -189070677 + FLAM_A SINE Alu 2 133 0 30 27 0 0 chr5 14015039 14015076 -189070456 + AT_rich Low_complexity Low_complexity 1 37 0 325 279 122 34 chr5 14015266 14015413 -189070119 + L1MB2 LINE L1 5338 5497 -681 394 212 50 10 chr5 14015419 14015518 -189070014 + L1MB2 LINE L1 5559 5661 -460 379 309 208 10 chr5 14015549 14015756 -189069776 + MIR SINE MIR 14 261 -1 592 288 211 3 chr5 14016284 14016635 -189068897 - L2 LINE L2 -22 3291 2868 * 1088 262 149 19 chr5 14016632 14017163 -189068369 - L2 LINE L2 -1203 2111 1512 189 310 0 0 chr5 14017229 14017287 -189068245 + MER5B DNA MER1_type 36 93 -85 505 160 160 0 chr5 14017720 14017820 -189067712 - MLT1A1 LTR MaLR -78 287 172 1975 168 48 0 chr5 14018072 14018423 -189067109 + L1MB2 LINE L1 5802 6169 -2 198 303 0 0 chr5 14018427 14018516 -189067016 + A-rich Low_complexity Low_complexity 1 89 0 * 886 123 11 22 chr5 14018506 14018685 -189066847 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 352 205 9 18 chr5 14019727 14019839 -189065693 + (TATG)n Simple_repeat Simple_repeat 1 111 0 256 220 0 0 chr5 14019842 14019892 -189065640 + MER4-int LTR ERV1 1111 1160 -5438 350 303 99 7 chr5 14020717 14020859 -189064673 - MIR SINE MIR -70 192 38 205 235 39 0 chr5 14022535 14022586 -189062946 - L2 LINE L2 0 3313 3261 2435 59 0 0 chr5 14022665 14022952 -189062580 + AluY SINE Alu 1 287 -24 415 13 13 53 chr5 14022955 14023031 -189062501 + (TAAAA)n Simple_repeat Simple_repeat 2 74 0 1629 152 99 9 chr5 14023682 14024005 -189061527 - L1MA8 LINE L1 -5 6286 5935 688 233 34 45 chr5 14027123 14027299 -189058233 + MER5B DNA MER1_type 2 175 -3 2089 101 11 4 chr5 14027404 14027681 -189057851 + AluSq SINE Alu 1 279 -34 641 143 20 10 chr5 14028556 14028654 -189056878 + AluJb SINE Alu 195 293 -19 257 259 133 30 chr5 14029151 14029286 -189056246 - L3 LINE CR1 -53 1524 1376 327 243 107 14 chr5 14030377 14030517 -189055015 - L3 LINE CR1 -205 1372 1220 2005 137 0 0 chr5 14030614 14030921 -189054611 + L1P3 LINE L1 1351 1657 -4804 7566 55 7 0 chr5 14030924 14032568 -189052964 + L1PA6 LINE L1 4504 6153 -1 1629 278 88 14 chr5 14033112 14033840 -189051692 - L1MEc LINE L1 -3255 2960 2179 28 0 0 0 chr5 14034201 14034229 -189051303 + AT_rich Low_complexity Low_complexity 1 28 0 906 296 85 44 chr5 14034301 14035140 -189050392 - L1MEc LINE L1 -4733 1663 791 262 224 41 61 chr5 14035308 14035406 -189050126 - L1MEc LINE L1 -5737 468 373 524 234 30 85 chr5 14035630 14035831 -189049701 - MLT1C LTR MaLR -275 192 3 4384 74 7 0 chr5 14036172 14036725 -189048807 + HERVL LTR ERVL 4018 4574 -1080 1150 141 0 0 chr5 14036731 14036901 -189048631 - LTR45B LTR ERV1 -319 170 1 203 310 14 0 chr5 14037225 14037296 -189048236 + CT-rich Low_complexity Low_complexity 4 75 0 482 298 137 0 chr5 14037441 14037602 -189047930 - MER5A DNA MER1_type -3 186 4 180 354 0 0 chr5 14038816 14038864 -189046668 - L2 LINE L2 -4 3268 3221 28 0 0 0 chr5 14041176 14041204 -189044328 + AT_rich Low_complexity Low_complexity 1 28 0 182 222 28 0 chr5 14041795 14041831 -189043701 + L3b LINE CR1 1439 1475 -108 2126 112 0 25 chr5 14041834 14042148 -189043384 + AluSx SINE Alu 3 308 -4 393 274 47 0 chr5 14042921 14043027 -189042505 - L2 LINE L2 0 3313 3203 263 295 54 27 chr5 14043437 14043586 -189041946 + L1ME2 LINE L1 6009 6161 -5 452 298 93 27 chr5 14043668 14043893 -189041639 - MIR SINE MIR -13 249 10 2462 67 0 0 chr5 14044230 14044529 -189041003 - AluY SINE Alu -12 299 1 5381 145 7 61 chr5 14045839 14045952 -189039580 + MER49 LTR ERV1 1 118 -805 5457 53 5 2 chr5 14045952 14046593 -189038939 + L1PA8 LINE L1 5526 6168 -4 5381 145 7 61 chr5 14046593 14047434 -189038098 + MER49 LTR ERV1 118 905 -18 2413 44 3 7 chr5 14047434 14047728 -189037804 - AluY SINE Alu -18 293 1 5381 145 7 61 chr5 14047728 14047744 -189037788 + MER49 LTR ERV1 905 920 -3 200 215 32 21 chr5 14047754 14047847 -189037685 + CT-rich Low_complexity Low_complexity 3 96 0 182 337 22 45 chr5 14049039 14049128 -189036404 - L2 LINE L2 -18 3254 3168 2549 129 22 0 chr5 14049263 14049619 -189035913 - THE1B LTR MaLR 0 364 1 1877 236 47 2 chr5 14051063 14051534 -189033998 - MLT1D LTR MaLR -7 498 7 1996 144 0 10 chr5 14052416 14052708 -189032824 + AluSx SINE Alu 5 293 -19 320 271 135 29 chr5 14053478 14053648 -189031884 - MLT1K LTR MaLR -26 562 375 603 312 51 38 chr5 14053726 14053963 -189031569 - MLT1K LTR MaLR -342 246 7 1427 194 90 15 chr5 14054563 14054898 -189030634 - MLT1A1 LTR MaLR 0 365 6 620 279 124 13 chr5 14054905 14055203 -189030329 - L1MEc LINE L1 -6017 379 49 308 272 67 67 chr5 14055448 14055643 -189029889 + LTR67 LTR ERVL 70 264 -293 2139 150 109 10 chr5 14055658 14056051 -189029481 - MSTB1 LTR MaLR 0 432 1 423 267 17 17 chr5 14057441 14057557 -189027975 - MIR3 SINE MIR -27 181 66 2015 176 16 11 chr5 14057557 14057920 -189027612 + MLT1A1 LTR MaLR 1 365 0 3873 88 13 2 chr5 14057970 14058502 -189027030 + L1PB1 LINE L1 5610 6147 -4 377 248 23 38 chr5 14058940 14059073 -189026459 + L3 LINE CR1 901 1031 -546 202 323 169 10 chr5 14059074 14059275 -189026257 + L3 LINE CR1 1343 1575 -2 401 253 79 42 chr5 14059291 14059481 -189026051 + MIR SINE MIR 59 255 -7 362 284 113 7 chr5 14059657 14059798 -189025734 + MLT1K LTR MaLR 376 531 -57 434 266 76 13 chr5 14060650 14060808 -189024724 - LTR52 LTR ERVL 0 421 254 475 210 94 22 chr5 14060881 14061019 -189024513 - MLT1C LTR MaLR -314 153 6 1992 189 16 13 chr5 14061517 14061893 -189023639 - MLT1B LTR MaLR -13 377 1 2180 99 7 0 chr5 14062377 14062661 -189022871 + AluSq SINE Alu 26 311 -2 1755 192 149 11 chr5 14062727 14063170 -189022362 + MLT1D LTR MaLR 1 504 -1 637 165 0 0 chr5 14063876 14063991 -189021541 - L1MB1 LINE L1 -1465 4681 4567 4935 165 25 27 chr5 14063995 14064907 -189020625 + L1MB1 LINE L1 4697 5610 -558 2272 110 48 28 chr5 14064907 14065262 -189020270 + THE1B LTR MaLR 3 364 0 4935 165 25 27 chr5 14065262 14065458 -189020074 + L1MB1 LINE L1 5610 5805 -363 795 195 87 0 chr5 14065458 14065607 -189019925 + FAM SINE Alu 2 163 -12 4935 165 25 27 chr5 14065607 14065965 -189019567 + L1MB1 LINE L1 5805 6159 -9 1787 203 47 19 chr5 14066041 14066465 -189019067 - MER63B DNA MER1_type 0 436 1 26 30 0 0 chr5 14066623 14066656 -189018876 + AT_rich Low_complexity Low_complexity 1 33 0 430 179 143 9 chr5 14066787 14066899 -189018633 + MER53 DNA DNA 1 127 -62 2316 107 13 0 chr5 14066907 14067207 -189018325 + AluSp SINE Alu 1 304 -9 2294 134 180 53 chr5 14067310 14067463 -189018069 + LTR18B LTR ERVL 1 133 -481 2214 108 0 10 chr5 14067463 14067758 -189017774 - AluSq SINE Alu -21 292 1 2294 134 180 53 chr5 14067758 14068149 -189017383 + LTR18B LTR ERVL 133 614 0 272 253 69 0 chr5 14069492 14069579 -189015953 - MLT1L LTR MaLR -155 460 368 629 272 156 82 chr5 14069794 14070346 -189015186 + MLT1G1 LTR MaLR 1 593 -2 2390 79 7 0 chr5 14071109 14071401 -189014131 - AluSp SINE Alu -19 294 1 430 205 0 0 chr5 14072668 14072751 -189012781 - MER5A DNA MER1_type -98 91 9 677 234 86 11 chr5 14072806 14072981 -189012551 + MER5A DNA MER1_type 1 188 -1 701 203 0 0 chr5 14073079 14073237 -189012295 - FLAM_A SINE Alu 0 133 3 954 217 14 27 chr5 14073561 14073782 -189011750 + MER20 DNA MER1_type 2 219 0 495 295 78 0 chr5 14074585 14074802 -189010730 - MER46C DNA MER2_type -21 317 84 210 133 67 22 chr5 14076180 14076270 -189009262 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 201 129 0 0 chr5 14077583 14077614 -189007918 + (CA)n Simple_repeat Simple_repeat 2 32 0 1747 168 55 26 chr5 14079068 14079450 -189006082 - L1MB4 LINE L1 -1 6179 5787 325 204 126 68 chr5 14079450 14079553 -189005979 + L1PB4 LINE L1 6045 6153 -3 * 821 153 0 21 chr5 14079545 14079689 -189005843 - L1MB4 LINE L1 -374 5806 5666 213 94 0 0 chr5 14080594 14080626 -189004906 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 430 259 23 30 chr5 14080638 14080769 -189004763 - MIR SINE MIR -118 144 15 1152 176 5 0 chr5 14082078 14082266 -189003266 + MER5A DNA MER1_type 1 189 0 2007 159 0 0 chr5 14082636 14082931 -189002601 - AluJb SINE Alu -17 295 1 6893 54 15 3 chr5 14084879 14086249 -188999283 + L1PA7 LINE L1 4788 6169 0 273 242 0 105 chr5 14086339 14086434 -188999098 - MER5A DNA MER1_type -96 93 9 240 59 0 0 chr5 14086765 14086799 -188998733 + (CA)n Simple_repeat Simple_repeat 2 35 0 3786 145 22 16 chr5 14087790 14088473 -188997059 + L1MA4 LINE L1 5606 6292 -8 296 311 95 48 chr5 14088812 14089191 -188996341 + L2 LINE L2 2581 2977 -337 227 249 50 138 chr5 14089230 14089491 -188996041 + L2 LINE L2 3076 3313 0 2221 106 0 0 chr5 14089970 14090302 -188995230 + AluSx SINE Alu 1 332 0 234 156 0 0 chr5 14091098 14091143 -188994389 + (CCA)n Simple_repeat Simple_repeat 1 45 0 376 108 18 63 chr5 14092794 14092905 -188992627 + (TCCCC)n Simple_repeat Simple_repeat 2 107 0 236 157 39 20 chr5 14093766 14093817 -188991715 + CT-rich Low_complexity Low_complexity 5 56 0 205 333 104 9 chr5 14094514 14094631 -188990901 + MER5A DNA MER1_type 1 138 -51 203 308 19 67 chr5 14095111 14095215 -188990317 + MER5B DNA MER1_type 5 103 -75 2151 107 0 0 chr5 14097085 14097396 -188988136 - AluSx SINE Alu 0 312 1 367 176 10 88 chr5 14098537 14098639 -188986893 - L1ME4a LINE L1 -62 6059 5966 289 203 236 32 chr5 14098654 14098777 -188986755 - HAL1 LINE L1 0 2507 2360 261 206 0 63 chr5 14099473 14099662 -188985870 + G-rich Low_complexity Low_complexity 2 178 0 1187 280 134 57 chr5 14099999 14101421 -188984111 - L2 LINE L2 -705 2609 1065 295 277 79 98 chr5 14101532 14101774 -188983758 - L2 LINE L2 -2784 530 298 2274 116 0 0 chr5 14101774 14102075 -188983457 - AluSc SINE Alu -8 301 1 295 277 79 98 chr5 14102075 14102262 -188983270 - L2 LINE L2 -3016 298 109 2429 84 0 0 chr5 14102490 14102787 -188982745 + AluSc SINE Alu 1 297 -12 1724 158 66 39 chr5 14103809 14104144 -188981388 - MER2 DNA MER2_type 0 344 1 2311 95 0 0 chr5 14105419 14105713 -188979819 + AluSg SINE Alu 1 294 -16 545 208 20 67 chr5 14105969 14106118 -188979414 - MER5B DNA MER1_type -36 142 1 266 286 176 8 chr5 14106576 14106695 -188978837 + L2 LINE L2 3132 3270 -2 2159 108 19 32 chr5 14109660 14109975 -188975557 + AluSp SINE Alu 1 311 -2 824 304 113 50 chr5 14110256 14111053 -188974479 - L2 LINE L2 -213 3059 2196 783 52 21 0 chr5 14111056 14111152 -188974380 + L1PA7 LINE L1 6056 6153 -1 302 248 47 54 chr5 14111454 14111583 -188973949 + MLT1J1 LTR MaLR 39 166 -280 358 245 44 57 chr5 14111599 14111758 -188973774 + MLT1J2 LTR MaLR 268 424 -26 21 36 0 0 chr5 14112138 14112166 -188973366 + AT_rich Low_complexity Low_complexity 1 28 0 189 378 0 0 chr5 14112263 14112345 -188973187 + L2 LINE L2 3232 3313 0 244 299 13 39 chr5 14113134 14113211 -188972321 + MLT1J LTR MaLR 203 277 -234 1600 187 17 43 chr5 14113344 14113691 -188971841 + MLT1D LTR MaLR 2 339 -166 622 227 68 0 chr5 14114120 14114283 -188971249 + MER69A DNA AcHobo 1 174 -3 2225 118 0 10 chr5 14116382 14116695 -188968837 - AluSx SINE Alu -2 310 1 198 0 0 0 chr5 14117160 14117182 -188968350 + (ATG)n Simple_repeat Simple_repeat 2 23 0 274 224 13 26 chr5 14117806 14117882 -188967650 - MIR SINE MIR -138 124 50 467 383 17 0 chr5 14117914 14118144 -188967388 + L3 LINE CR1 950 1183 -394 976 190 79 129 chr5 14118153 14118659 -188966873 + MER39 LTR ERV1 1 707 0 484 337 103 16 chr5 14118662 14118914 -188966618 + L3 LINE CR1 1206 1479 -98 1187 182 117 5 chr5 14121189 14121403 -188964129 - MER8 DNA MER2_type 0 239 2 2031 114 3 23 chr5 14121956 14122255 -188963277 - AluSx SINE Alu -19 293 1 327 314 0 0 chr5 14122721 14122823 -188962709 - L1MC4 LINE L1 -1348 6694 6593 4722 136 14 8 chr5 14123280 14123886 -188961646 + Tigger1 DNA MER2_type 144 756 -1662 2409 77 7 0 chr5 14123886 14124185 -188961347 - AluSg SINE Alu -9 301 1 4722 136 14 8 chr5 14124185 14124301 -188961231 + Tigger1 DNA MER2_type 756 870 -1548 581 172 0 0 chr5 14124298 14124391 -188961141 + Tigger1 DNA MER2_type 2326 2418 0 * 215 178 22 0 chr5 14125408 14125453 -188960079 + (TA)n Simple_repeat Simple_repeat 1 46 0 468 247 65 49 chr5 14128358 14128550 -188956982 + MIR SINE MIR 62 262 0 2165 129 10 0 chr5 14131526 14131835 -188953697 - AluSx SINE Alu 0 312 1 850 93 0 9 chr5 14132378 14132485 -188953047 + U6 snRNA snRNA 1 106 -1 204 40 0 0 chr5 14132781 14132806 -188952726 + (TG)n Simple_repeat Simple_repeat 2 26 0 2295 166 58 32 chr5 14133547 14133889 -188951643 - L1MB2 LINE L1 -2 6169 5808 1798 172 3 3 chr5 14133889 14134185 -188951347 - AluSx SINE Alu -14 298 3 2295 166 58 32 chr5 14134185 14134341 -188951191 - L1MB2 LINE L1 -363 5808 5658 12544 157 43 28 chr5 14134344 14136703 -188948829 - L1M4c LINE L1 -3884 2500 100 2145 220 30 65 chr5 14136703 14137275 -188948257 + MLT2B3 LTR ERVL 1 552 -2 12544 157 43 28 chr5 14137275 14137361 -188948171 - L1M4c LINE L1 -6284 100 17 1584 235 201 4 chr5 14137842 14138305 -188947227 + L1MD2 LINE L1 5793 6346 -13 2039 117 0 4 chr5 14138727 14139001 -188946531 + AluSg SINE Alu 1 273 -37 240 35 0 0 chr5 14139005 14139034 -188946498 + (CAA)n Simple_repeat Simple_repeat 1 29 0 2364 8 0 0 chr5 14140054 14140302 -188945230 - L1PA3 LINE L1 -4 6151 5904 1954 209 41 53 chr5 14140302 14140809 -188944723 - MLT1D LTR MaLR -4 501 1 1492 130 126 15 chr5 14141606 14141867 -188943665 - AluSg1 SINE Alu -19 290 1 256 205 26 111 chr5 14142663 14142780 -188942752 + MER31-int LTR ERV1 3334 3440 -1496 2225 151 3 26 chr5 14143370 14143715 -188941817 + MER1B DNA MER1_type 1 337 0 279 79 0 0 chr5 14144250 14144288 -188941244 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 2124 134 3 3 chr5 14144958 14145264 -188940268 + AluSx SINE Alu 1 306 -6 1338 112 0 0 chr5 14145270 14145449 -188940083 + AluSg/x SINE Alu 129 307 -5 384 180 29 151 chr5 14147027 14147199 -188938333 - MER103 DNA DNA -1 165 15 186 43 0 0 chr5 14149720 14149743 -188935789 + (TA)n Simple_repeat Simple_repeat 1 23 0 487 248 141 27 chr5 14150135 14150284 -188935248 - MLT1D LTR MaLR -3 464 337 2349 176 36 7 chr5 14150332 14150747 -188934785 - MSTB1 LTR MaLR 0 432 6 867 225 28 51 chr5 14150757 14151010 -188934522 - MLT1D LTR MaLR -258 247 1 2329 179 60 18 chr5 14151249 14151696 -188933836 + MLT1C LTR MaLR 2 467 0 23 0 0 0 chr5 14151906 14151929 -188933603 + AT_rich Low_complexity Low_complexity 1 23 0 262 0 26 26 chr5 14152003 14152042 -188933490 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1105 215 9 18 chr5 14154037 14154256 -188931276 - MER20 DNA MER1_type -2 217 1 2559 181 94 6 chr5 14155747 14156260 -188929272 + MER89 LTR ERV1 2 559 0 21 57 0 0 chr5 14157035 14157070 -188928462 + AT_rich Low_complexity Low_complexity 1 35 0 971 232 222 3 chr5 14157557 14157921 -188927611 + MER110A LTR ERV1 48 470 0 465 309 40 17 chr5 14159391 14159566 -188925966 - MIR SINE MIR -13 249 71 21 36 0 0 chr5 14159942 14159970 -188925562 + AT_rich Low_complexity Low_complexity 1 28 0 257 225 96 75 chr5 14160608 14160795 -188924737 + LTR48 LTR ERV1 547 737 -50 24 32 0 0 chr5 14161642 14161673 -188923859 + AT_rich Low_complexity Low_complexity 1 31 0 786 172 0 8 chr5 14161673 14161795 -188923737 - FLAM_A SINE Alu -12 121 1 237 239 22 87 chr5 14161992 14162130 -188923402 - MER5A DNA MER1_type -2 187 59 2680 111 5 24 chr5 14162433 14162804 -188922728 + THE1B LTR MaLR 1 364 0 11875 99 8 0 chr5 14162805 14164372 -188921160 + THE1B-int LTR MaLR 2 1580 0 2649 119 5 24 chr5 14164372 14164743 -188920789 + THE1B LTR MaLR 1 364 0 265 227 0 15 chr5 14165030 14165096 -188920436 + (TA)n Simple_repeat Simple_repeat 1 65 0 630 271 261 28 chr5 14166124 14166884 -188918648 + L2 LINE L2 2199 3221 -92 2138 139 0 0 chr5 14166884 14167187 -188918345 - AluSq SINE Alu -10 303 1 630 271 261 28 chr5 14167187 14167308 -188918224 + L2 LINE L2 3221 3313 0 530 204 88 15 chr5 14167882 14168019 -188917513 + Charlie2 DNA MER1_type 41 187 -2675 2431 239 89 15 chr5 14168166 14169040 -188916492 + Charlie2 DNA MER1_type 1908 2846 -16 4992 105 35 70 chr5 14170784 14171215 -188914317 + MER4E LTR ERV1 1 391 -388 2325 106 0 0 chr5 14171215 14171516 -188914016 - AluSc SINE Alu -8 301 1 4992 105 35 70 chr5 14171516 14171892 -188913640 + MER4E LTR ERV1 391 779 0 21 0 0 0 chr5 14173060 14173081 -188912451 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 14173308 14173329 -188912203 + AT_rich Low_complexity Low_complexity 1 21 0 268 257 14 29 chr5 14173404 14173474 -188912058 - MER5B DNA MER1_type 0 178 110 183 200 0 0 chr5 14173488 14173523 -188912009 + MER5B DNA MER1_type 138 172 -6 207 331 23 77 chr5 14173793 14173812 -188911720 - L2 LINE L2 -8 3264 3246 2487 55 0 7 chr5 14173812 14174120 -188911412 + AluY SINE Alu 1 306 -5 207 331 23 77 chr5 14174120 14174230 -188911302 - L2 LINE L2 -26 3246 3142 419 118 12 0 chr5 14174825 14174910 -188910622 + (GA)n Simple_repeat Simple_repeat 1 86 0 719 283 38 47 chr5 14175093 14175762 -188909770 + L1MCc LINE L1 1171 1949 -4887 * 880 270 81 12 chr5 14175758 14176080 -188909452 + L1MCc LINE L1 2176 2519 -4603 267 203 0 0 chr5 14176116 14176180 -188909352 + G-rich Low_complexity Low_complexity 1 64 0 1614 177 0 43 chr5 14176434 14176734 -188908798 + AluSx SINE Alu 1 287 -25 225 341 0 12 chr5 14181161 14181243 -188904289 - L2 LINE L2 -1 3271 3191 1574 287 120 15 chr5 14182312 14183362 -188902170 - L2 LINE L2 -14 3299 2142 237 344 149 0 chr5 14184726 14184947 -188900585 + L2 LINE L2 2827 3080 -233 5351 166 25 28 chr5 14184947 14185971 -188899561 + L1MA7 LINE L1 4923 5948 -343 1873 146 4 7 chr5 14185971 14186251 -188899281 + AluSx SINE Alu 1 279 -33 420 37 0 0 chr5 14186251 14186305 -188899227 + (CA)n Simple_repeat Simple_repeat 1 54 0 5351 166 25 28 chr5 14186305 14186580 -188898952 + L1MA7 LINE L1 5947 6226 -65 1261 168 58 13 chr5 14186580 14186806 -188898726 - MER46A DNA MER2_type 0 236 1 5351 166 25 28 chr5 14186806 14186862 -188898670 + L1MA7 LINE L1 6226 6281 -10 1862 125 40 3 chr5 14186884 14187181 -188898351 + L1MB5 LINE L1 5867 6174 0 552 182 40 40 chr5 14187228 14187376 -188898156 + L2 LINE L2 3158 3305 -8 265 270 110 10 chr5 14189924 14190024 -188895508 - MIR SINE MIR -70 192 83 442 335 62 5 chr5 14194222 14194446 -188891086 + MLT1J1 LTR MaLR 208 444 -2 2061 119 3 0 chr5 14194906 14195199 -188890333 + AluSx SINE Alu 1 294 -18 2432 125 15 9 chr5 14195563 14195898 -188889634 + MER1B DNA MER1_type 1 337 0 4139 256 68 30 chr5 14195986 14197478 -188888054 - L1MEc LINE L1 -4813 1583 36 2189 99 50 0 chr5 14199659 14199942 -188885590 - AluSc SINE Alu -12 297 1 1065 252 71 27 chr5 14200922 14201339 -188884193 - L1MEc LINE L1 -4904 1492 1095 185 0 40 0 chr5 14201339 14201364 -188884168 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 2955 57 6 0 chr5 14201364 14201714 -188883818 - L1PA7 LINE L1 -19 6135 5784 1065 252 71 27 chr5 14201714 14201775 -188883757 - L1MEc LINE L1 -5300 1096 992 419 100 14 0 chr5 14201933 14202003 -188883529 + (GA)n Simple_repeat Simple_repeat 2 72 0 222 288 4 44 chr5 14202260 14202359 -188883173 - MIR SINE MIR -61 147 52 243 0 0 0 chr5 14203307 14203334 -188882198 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 319 285 23 15 chr5 14204609 14204739 -188880793 + L1ME4a LINE L1 5773 5903 -218 223 292 14 0 chr5 14205121 14205193 -188880339 + (TA)n Simple_repeat Simple_repeat 2 74 0 333 0 0 0 chr5 14207066 14207103 -188878429 + (TG)n Simple_repeat Simple_repeat 2 38 0 2521 90 0 0 chr5 14208149 14208460 -188877072 - AluSx SINE Alu -1 311 1 2127 132 10 0 chr5 14208567 14208871 -188876661 + AluSx SINE Alu 1 307 -5 935 217 14 5 chr5 14210499 14210716 -188874816 + MER20 DNA MER1_type 1 219 0 557 322 55 0 chr5 14211335 14211537 -188873995 + L1ME LINE L1 5588 5800 -321 473 267 60 0 chr5 14211695 14211845 -188873687 + MER97c DNA MER1_type? 20 178 -912 763 261 101 13 chr5 14211896 14212202 -188873330 + MLT1J LTR MaLR 40 372 -139 522 272 60 30 chr5 14216807 14216988 -188868544 + MIR SINE MIR 11 202 -60 1799 197 43 47 chr5 14216988 14217027 -188868505 + MLT1D LTR MaLR 1 39 -466 2484 67 0 10 chr5 14217027 14217326 -188868206 - AluY SINE Alu -14 297 2 1799 197 43 47 chr5 14217326 14217793 -188867739 + MLT1D LTR MaLR 39 505 0 522 272 60 30 chr5 14217793 14217846 -188867686 + MIR SINE MIR 202 252 -10 589 249 14 84 chr5 14217870 14218039 -188867493 + MIR SINE MIR 2 151 -111 2436 87 3 6 chr5 14218039 14218351 -188867181 + AluY SINE Alu 1 311 0 589 249 14 84 chr5 14218351 14218422 -188867110 + MIR SINE MIR 151 225 -37 877 264 5 5 chr5 14218475 14218691 -188866841 + MER58A DNA MER1_type 2 217 -7 346 207 37 24 chr5 14220990 14221072 -188864460 + MER5B DNA MER1_type 90 172 -6 209 367 24 12 chr5 14221218 14221387 -188864145 - MER5B DNA MER1_type -4 174 4 998 200 19 23 chr5 14221402 14221617 -188863915 + MER20 DNA MER1_type 5 218 -1 2131 113 0 36 chr5 14221956 14222265 -188863267 + AluSx SINE Alu 3 300 -12 438 225 116 7 chr5 14223638 14223776 -188861756 - MER5A DNA MER1_type -4 185 33 239 220 250 30 chr5 14223946 14224046 -188861486 - MIR SINE MIR -70 192 71 21 36 0 0 chr5 14224372 14224400 -188861132 + AT_rich Low_complexity Low_complexity 1 28 0 187 323 86 21 chr5 14227143 14227236 -188858296 + L2 LINE L2 3149 3247 -25 227 140 0 60 chr5 14227846 14227896 -188857636 - L1M3e LINE L1 -5955 1075 1029 557 163 8 57 chr5 14228559 14228682 -188856850 + MER20 DNA MER1_type 56 172 -47 203 186 12 116 chr5 14228787 14228873 -188856659 - MER5A DNA MER1_type -2 187 111 716 253 29 6 chr5 14229699 14229873 -188855659 - MER58C DNA MER1_type 0 215 38 2491 71 3 0 chr5 14231198 14231494 -188854038 + AluSp SINE Alu 1 297 -16 247 336 57 8 chr5 14231669 14231791 -188853741 - L2 LINE L2 -11 3261 3134 989 234 42 73 chr5 14232738 14233122 -188852410 + MLT1E2-int LTR MaLR 1000 1371 0 1503 241 109 66 chr5 14233122 14233716 -188851816 + MLT1E2 LTR MaLR 1 620 -6 720 65 75 0 chr5 14233900 14234513 -188851019 + (TA)n Simple_repeat Simple_repeat 1 658 0 2474 63 0 7 chr5 14236684 14236985 -188848547 + AluY SINE Alu 1 299 -12 1455 211 39 14 chr5 14237499 14237855 -188847677 + MLT1A1 LTR MaLR 1 365 0 2256 124 3 0 chr5 14238523 14238830 -188846702 - AluSp SINE Alu -5 308 1 1463 248 86 79 chr5 14239079 14239699 -188845833 + MLT1E2 LTR MaLR 1 626 0 1189 198 27 7 chr5 14241115 14241433 -188844099 + MLT1A1 LTR MaLR 1 357 -8 326 264 87 28 chr5 14241756 14242010 -188843522 + L2 LINE L2 2458 2781 -533 488 237 53 0 chr5 14242161 14242292 -188843240 + L2 LINE L2 3168 3305 -8 1290 229 97 26 chr5 14243028 14243597 -188841935 - MLT1E2 LTR MaLR 0 626 1 1809 144 0 0 chr5 14244182 14244439 -188841093 - AluSx SINE Alu -55 257 1 1614 189 114 43 chr5 14244895 14245361 -188840171 - MLT1D LTR MaLR -5 500 2 27 29 0 0 chr5 14245993 14246027 -188839505 + AT_rich Low_complexity Low_complexity 1 34 0 1913 180 3 0 chr5 14246126 14246432 -188839100 - AluJb SINE Alu -5 307 1 2139 151 56 8 chr5 14246984 14247362 -188838170 + MSTD LTR MaLR 1 396 0 2457 36 4 0 chr5 14247787 14248067 -188837465 - AluY SINE Alu -7 304 24 239 247 49 35 chr5 14248074 14248175 -188837357 + MIR SINE MIR 64 162 -46 2342 171 58 18 chr5 14248454 14248903 -188836629 - MLT1C LTR MaLR 0 467 1 603 162 20 116 chr5 14250207 14250309 -188835223 + MER96B DNA MER1_type? 1 76 -341 455 116 70 0 chr5 14250309 14250395 -188835137 - L1MB3 LINE L1 -9 6174 6083 603 162 20 116 chr5 14250395 14250490 -188835042 + MER96B DNA MER1_type? 76 179 -238 285 236 14 0 chr5 14250550 14250622 -188834910 - MIR SINE MIR -115 147 75 191 325 0 26 chr5 14251325 14251402 -188834130 + L2 LINE L2 3185 3259 -13 290 370 16 16 chr5 14251556 14251740 -188833792 + MIR SINE MIR 8 191 -71 212 360 26 9 chr5 14252568 14252682 -188832850 - L2 LINE L2 -328 2944 2829 2341 213 31 6 chr5 14252959 14253517 -188832015 + L1MB5 LINE L1 5566 6167 -7 2371 90 6 0 chr5 14255793 14256104 -188829428 - AluSq SINE Alu 0 313 1 1368 175 4 41 chr5 14257484 14257752 -188827780 + Tigger3(Golem) DNA MER2_type 2781 3038 0 2207 118 7 0 chr5 14258160 14258457 -188827075 + AluSx SINE Alu 1 299 -13 194 253 38 51 chr5 14259292 14259371 -188826161 + L2 LINE L2 2677 2754 -560 1989 189 52 18 chr5 14259823 14260268 -188825264 - MLT1C LTR MaLR -2 465 6 683 288 16 0 chr5 14266286 14266470 -188819062 + MER58A DNA MER1_type 30 216 -8 1974 131 0 11 chr5 14267048 14267331 -188818201 + AluSg SINE Alu 1 280 -30 180 111 0 0 chr5 14267335 14267362 -188818170 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 387 41 0 0 chr5 14268063 14268112 -188817420 + (CA)n Simple_repeat Simple_repeat 2 50 0 1293 208 79 22 chr5 14268233 14268714 -188816818 + MLT1F1 LTR MaLR 3 559 -8 1675 201 137 27 chr5 14269070 14269517 -188816015 - MLT1D LTR MaLR -8 497 2 183 80 0 0 chr5 14269620 14269645 -188815887 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 236 318 24 0 chr5 14269650 14269735 -188815797 - L2 LINE L2 -22 3291 3205 477 301 67 16 chr5 14269757 14269950 -188815582 + L2 LINE L2 2864 3066 -247 22 35 0 0 chr5 14270856 14270885 -188814647 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 14271252 14271294 -188814238 + AT_rich Low_complexity Low_complexity 1 42 0 2362 80 7 3 chr5 14271425 14271725 -188813807 - AluY SINE Alu -10 301 1 1693 181 0 32 chr5 14272875 14273184 -188812348 - AluJb SINE Alu -13 299 1 231 88 0 0 chr5 14273993 14274027 -188811505 + (GA)n Simple_repeat Simple_repeat 1 34 0 2050 176 74 49 chr5 14274080 14274552 -188810980 + MER110 LTR ERV1 8 491 0 466 230 197 7 chr5 14275155 14275307 -188810225 - MIR SINE MIR -3 259 79 359 204 20 20 chr5 14275565 14275663 -188809869 - L1MA8 LINE L1 -5 6286 6189 324 70 0 0 chr5 14275740 14275783 -188809749 + (CA)n Simple_repeat Simple_repeat 2 44 0 2605 129 3 6 chr5 14275922 14276287 -188809245 - THE1B LTR MaLR 0 364 1 239 351 92 7 chr5 14276356 14276540 -188808992 - MIR SINE MIR -57 205 6 268 315 82 20 chr5 14276922 14277068 -188808464 - L2 LINE L2 -203 3069 2915 296 136 254 0 chr5 14277202 14277261 -188808271 - MADE1 DNA Mariner 0 80 7 299 271 17 59 chr5 14277280 14277398 -188808134 - MER5B DNA MER1_type -33 145 33 208 188 21 21 chr5 14277576 14277624 -188807908 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 234 260 65 65 chr5 14278338 14278461 -188807071 + LTR33 LTR ERVL 99 221 -300 200 346 59 20 chr5 14278710 14278811 -188806721 - L2 LINE L2 -508 2806 2702 678 223 0 7 chr5 14278919 14279058 -188806474 - L1MB5 LINE L1 -3 6171 6034 513 299 226 26 chr5 14279066 14279601 -188805931 - L2 LINE L2 -609 2705 2064 24 0 0 0 chr5 14280804 14280828 -188804704 + AT_rich Low_complexity Low_complexity 1 24 0 249 193 53 0 chr5 14280834 14280891 -188804641 - MIR SINE MIR -17 245 186 372 316 95 7 chr5 14280904 14281216 -188804316 - L1ME LINE L1 -453 5668 5318 30 77 0 0 chr5 14282682 14282747 -188802785 + AT_rich Low_complexity Low_complexity 1 65 0 186 405 101 0 chr5 14283562 14283710 -188801822 - L2 LINE L2 -4 3268 3106 1250 113 0 27 chr5 14284319 14284505 -188801027 + AluSg/x SINE Alu 132 312 0 645 122 0 0 chr5 14284614 14284696 -188800836 - AluS SINE Alu -228 84 3 26 0 0 0 chr5 14284926 14284952 -188800580 + AT_rich Low_complexity Low_complexity 1 26 0 1946 141 82 25 chr5 14285218 14285573 -188799959 + THE1C LTR MaLR 1 375 0 874 96 39 31 chr5 14286828 14287441 -188798091 + (TG)n Simple_repeat Simple_repeat 1 617 0 2365 102 0 3 chr5 14288724 14289037 -188796495 - AluSq SINE Alu -1 312 1 243 191 0 0 chr5 14289049 14289112 -188796420 + CT-rich Low_complexity Low_complexity 1 63 0 209 333 42 61 chr5 14290291 14290504 -188795028 + L2 LINE L2 2969 3177 -95 6675 92 13 13 chr5 14292430 14293808 -188791724 + L1PA10 LINE L1 4789 6166 -2 270 280 34 42 chr5 14293938 14294056 -188791476 + MLT1J LTR MaLR 358 474 -37 402 216 35 26 chr5 14294107 14294223 -188791309 + L2 LINE L2 3101 3217 -96 241 256 0 37 chr5 14294475 14294517 -188791015 + L2 LINE L2 3235 3274 -39 2446 168 26 16 chr5 14294517 14294946 -188790586 + Tigger2a DNA MER2_type 1 433 -1 241 256 0 37 chr5 14294946 14294985 -188790547 + L2 LINE L2 3274 3313 0 828 209 44 11 chr5 14295818 14296000 -188789532 + MER58A DNA MER1_type 37 224 0 882 276 107 31 chr5 14296648 14297256 -188788276 + MLT2F LTR ERVL 2 655 -8 1850 227 29 48 chr5 14297535 14298050 -188787482 + MLT1D LTR MaLR 1 505 0 768 265 70 90 chr5 14299714 14300345 -188785187 + HAL1 LINE L1 734 1351 -1156 450 229 251 16 chr5 14300424 14300607 -188784925 + HAL1 LINE L1 1557 1782 -725 233 238 99 50 chr5 14303999 14304100 -188781432 - MIR SINE MIR -22 240 135 23 0 0 0 chr5 14304594 14304617 -188780915 + AT_rich Low_complexity Low_complexity 1 23 0 2534 64 0 3 chr5 14305845 14306157 -188779375 - AluY SINE Alu 0 311 1 466 248 113 89 chr5 14306166 14306468 -188779064 + L2 LINE L2 3004 3312 -1 252 0 0 0 chr5 14306561 14306589 -188778943 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2413 105 0 0 chr5 14307970 14308283 -188777249 - AluSq SINE Alu 0 313 1 743 67 0 0 chr5 14308610 14308729 -188776803 - AluSg/x SINE Alu 0 311 193 832 145 0 0 chr5 14308736 14308853 -188776679 - FLAM_C SINE Alu -16 117 1 201 164 16 33 chr5 14310358 14310419 -188775113 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 221 310 178 8 chr5 14311100 14311229 -188774303 + MIR SINE MIR 89 239 -23 3045 78 3 0 chr5 14312192 14312576 -188772956 + L1PA7 LINE L1 5770 6154 0 276 259 101 62 chr5 14313210 14313546 -188771986 + L1M4 LINE L1 4310 4658 -1488 366 228 26 35 chr5 14314045 14314159 -188771373 - L1ME LINE L1 -663 5499 5387 658 272 52 35 chr5 14314159 14314574 -188770958 + L1M4 LINE L1 4418 4836 -1310 2057 78 8 0 chr5 14314861 14315119 -188770413 + AluY SINE Alu 43 302 -9 1853 148 30 3 chr5 14315306 14315603 -188769929 + AluSx SINE Alu 5 309 -3 287 277 12 0 chr5 14316179 14316262 -188769270 + MER69 DNA AcHobo 2434 2517 -9 292 349 137 11 chr5 14316571 14316746 -188768786 - L2 LINE L2 -678 2636 2440 31 0 0 0 chr5 14317088 14317119 -188768413 + AT_rich Low_complexity Low_complexity 1 31 0 268 230 11 23 chr5 14318988 14319075 -188766457 + (TA)n Simple_repeat Simple_repeat 1 86 0 437 288 86 56 chr5 14319721 14319954 -188765578 + L2 LINE L2 2670 2909 -405 489 317 18 23 chr5 14320044 14320265 -188765267 + L2 LINE L2 3075 3294 -19 1623 209 45 73 chr5 14321381 14321900 -188763632 + MLT1D LTR MaLR 2 567 0 296 264 76 69 chr5 14322888 14323032 -188762500 - MER70-int LTR ERVL -2933 2090 1946 425 120 43 0 chr5 14323164 14323256 -188762276 + CT-rich Low_complexity Low_complexity 3 98 0 1431 206 109 6 chr5 14324649 14324960 -188760572 + MLT1D LTR MaLR 1 343 -162 1741 176 7 0 chr5 14327706 14327995 -188757537 + AluJb SINE Alu 5 295 -17 606 276 190 41 chr5 14330824 14330937 -188754595 + L2 LINE L2 2788 2883 -430 1269 240 88 30 chr5 14330937 14331378 -188754154 + MLT1C LTR MaLR 1 467 0 606 276 190 41 chr5 14331378 14331598 -188753934 + L2 LINE L2 2883 3069 -244 2578 138 14 8 chr5 14331598 14331960 -188753572 - THE1B LTR MaLR 0 364 1 606 276 190 41 chr5 14331960 14332088 -188753444 + L2 LINE L2 3069 3313 0 518 223 0 25 chr5 14332477 14332598 -188752934 - MIR SINE MIR -122 140 23 2143 111 3 40 chr5 14333238 14333562 -188751970 + AluSx SINE Alu 1 312 0 1899 148 21 0 chr5 14333667 14333958 -188751574 - AluJo SINE Alu -15 297 1 929 193 6 11 chr5 14334539 14334715 -188750817 + AluJo SINE Alu 122 296 -16 258 32 0 0 chr5 14334821 14334852 -188750680 + (TG)n Simple_repeat Simple_repeat 2 32 0 363 193 0 0 chr5 14334852 14334935 -188750597 + (TA)n Simple_repeat Simple_repeat 2 84 0 186 133 0 0 chr5 14334978 14335008 -188750524 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 2898 16 0 0 chr5 14335244 14335557 -188749975 + L1PA2 LINE L1 5841 6153 -2 1424 147 137 13 chr5 14336126 14336425 -188749107 + THE1C LTR MaLR 1 336 -39 10887 119 30 12 chr5 14336426 14337978 -188747554 + THE1C-int LTR MaLR 1 1580 0 2088 127 63 30 chr5 14337978 14338341 -188747191 + THE1C LTR MaLR 1 375 0 327 85 0 0 chr5 14338890 14338937 -188746595 + (TG)n Simple_repeat Simple_repeat 1 47 0 333 229 0 0 chr5 14339330 14339435 -188746097 + (CA)n Simple_repeat Simple_repeat 1 105 0 428 308 62 7 chr5 14339528 14339674 -188745858 - MIR SINE MIR -48 214 61 1745 167 89 30 chr5 14339937 14340332 -188745200 + LTR52 LTR ERVL 1 418 -3 916 204 82 0 chr5 14340688 14340884 -188744648 - MER20 DNA MER1_type -7 212 1 2538 74 0 0 chr5 14342187 14342497 -188743035 - AluY SINE Alu -1 310 1 1128 143 0 30 chr5 14342673 14342841 -188742691 - FRAM SINE Alu -1 165 3 283 188 0 25 chr5 14343861 14343941 -188741591 + (CATATA)n Simple_repeat Simple_repeat 3 80 0 203 190 0 35 chr5 14344870 14344928 -188740604 + (CCCTG)n Simple_repeat Simple_repeat 3 58 0 750 107 43 14 chr5 14345286 14345857 -188739675 + (CA)n Simple_repeat Simple_repeat 1 587 0 465 143 41 21 chr5 14345880 14346359 -188739173 + (CA)n Simple_repeat Simple_repeat 1 488 0 224 204 0 56 chr5 14346413 14346467 -188739065 + L2 LINE L2 2718 2768 -546 787 211 43 0 chr5 14347665 14347850 -188737682 + MER20 DNA MER1_type 27 219 0 222 316 24 97 chr5 14347932 14348138 -188737394 + MIR SINE MIR 22 212 -50 382 267 43 105 chr5 14348390 14348667 -188736865 + MIR SINE MIR 2 261 -1 2370 99 7 0 chr5 14349459 14349763 -188735769 - AluSx SINE Alu -6 306 1 1724 201 64 31 chr5 14350445 14350928 -188734604 + MLT1D LTR MaLR 7 505 0 382 268 159 78 chr5 14351291 14351411 -188734121 - L2 LINE L2 -64 3249 3140 1515 188 124 28 chr5 14351411 14351837 -188733695 + MLT1C LTR MaLR 1 467 0 382 268 159 78 chr5 14351837 14352218 -188733314 - L2 LINE L2 -173 3140 2690 243 298 35 0 chr5 14352219 14352318 -188733214 + L1ME2 LINE L1 6065 6324 -10 313 260 175 15 chr5 14352326 14352526 -188733006 - L2 LINE L2 -613 2701 2470 254 256 29 12 chr5 14353510 14353682 -188731850 + (TA)n Simple_repeat Simple_repeat 2 176 0 1534 221 42 16 chr5 14354425 14354805 -188730727 - MER90 LTR ERV1 0 614 225 324 0 0 0 chr5 14355635 14355671 -188729861 + (TC)n Simple_repeat Simple_repeat 2 37 0 240 35 0 0 chr5 14355670 14355699 -188729833 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 1999 155 3 0 chr5 14355699 14355995 -188729537 - AluJo SINE Alu -15 297 1 26 30 0 0 chr5 14356266 14356299 -188729233 + AT_rich Low_complexity Low_complexity 1 33 0 977 261 78 7 chr5 14356362 14356809 -188728723 - MER119 DNA MER1_type -2 581 6 27 29 0 0 chr5 14357112 14357146 -188728386 + AT_rich Low_complexity Low_complexity 1 34 0 479 306 40 69 chr5 14357698 14357948 -188727584 - MIR SINE MIR -11 251 6 2148 117 47 36 chr5 14358490 14358850 -188726682 + THE1B LTR MaLR 1 364 0 398 138 25 38 chr5 14359951 14360031 -188725501 + MER20 DNA MER1_type 141 219 0 202 387 69 15 chr5 14360962 14361166 -188724366 + L2 LINE L2 2551 2765 -549 367 298 48 42 chr5 14361557 14361725 -188723807 + L2 LINE L2 3127 3295 -18 1127 190 14 23 chr5 14361988 14362209 -188723323 - MER20 DNA MER1_type 0 219 1 1872 124 66 30 chr5 14362542 14362904 -188722628 - THE1C LTR MaLR 0 375 1 784 187 7 0 chr5 14364157 14364312 -188721220 + MLT2C1 LTR ERVL 27 182 -215 722 172 0 0 chr5 14364318 14364440 -188721092 + MLT2C2 LTR ERVL 295 416 -48 377 261 124 23 chr5 14364484 14364805 -188720727 + MLT1F LTR MaLR 231 527 -15 601 181 110 1 chr5 14365730 14365954 -188719578 - MSTD LTR MaLR -119 277 1 454 147 60 86 chr5 14367256 14367372 -188718160 + LTR54 LTR ERV1 81 193 -317 1056 170 102 18 chr5 14367376 14367659 -188717873 + LTR54B LTR ERV1 169 475 -23 2643 61 0 0 chr5 14367659 14367970 -188717562 + AluY SINE Alu 1 311 0 299 258 40 0 chr5 14368514 14368638 -188716894 + L1ME4a LINE L1 5757 5885 -236 282 95 0 0 chr5 14368670 14368712 -188716820 + (TG)n Simple_repeat Simple_repeat 1 42 0 463 306 115 25 chr5 14368954 14369232 -188716300 - L3 LINE CR1 -393 1184 882 568 162 52 15 chr5 14369375 14369511 -188716021 + MLT1C LTR MaLR 1 141 -326 491 205 0 0 chr5 14369519 14369602 -188715930 - MER58A DNA MER1_type -18 89 7 259 365 48 12 chr5 14369612 14369779 -188715753 - MIR SINE MIR -89 173 1 1884 158 0 10 chr5 14369826 14370130 -188715402 + AluSx SINE Alu 1 301 -11 2284 100 0 19 chr5 14370877 14371188 -188714344 - AluSg SINE Alu -5 305 1 2327 86 0 0 chr5 14372065 14372357 -188713175 - AluSx SINE Alu -20 292 1 1788 150 0 64 chr5 14373481 14373808 -188711724 + AluSx SINE Alu 3 308 -4 640 316 18 4 chr5 14374206 14374431 -188711101 + MIR SINE MIR 3 230 -32 350 210 20 10 chr5 14376357 14376457 -188709075 + MER112 DNA MER1_type 148 248 -12 32 57 0 0 chr5 14377174 14377227 -188708305 + AT_rich Low_complexity Low_complexity 1 53 0 1556 175 68 22 chr5 14378037 14378402 -188707130 + MER58D DNA MER1_type 2 383 -3 22 35 0 0 chr5 14378420 14378449 -188707083 + AT_rich Low_complexity Low_complexity 1 29 0 865 231 18 27 chr5 14380289 14380514 -188705018 - MIR SINE MIR -25 237 15 305 261 52 30 chr5 14381400 14381534 -188703998 - L2 LINE L2 -1059 2255 2119 668 225 89 0 chr5 14381534 14381747 -188703785 + L2 LINE L2 1981 2212 -1102 1277 235 43 56 chr5 14381767 14382235 -188703297 + MLT1C LTR MaLR 6 467 0 21 0 0 0 chr5 14382556 14382577 -188702955 + AT_rich Low_complexity Low_complexity 1 21 0 1876 146 11 0 chr5 14382679 14383009 -188702523 - AluSx SINE Alu 0 333 1 371 283 209 4 chr5 14383515 14383759 -188701773 - L2 LINE L2 0 3313 3020 289 269 52 30 chr5 14383833 14383967 -188701565 - L2 LINE L2 -1059 2255 2119 594 220 93 9 chr5 14383967 14384181 -188701351 + L2 LINE L2 1981 2212 -1102 307 281 39 23 chr5 14384198 14384326 -188701206 + MER94 DNA DNA 3 132 -2 941 283 172 40 chr5 14384329 14384793 -188700739 + L2 LINE L2 2216 2754 -560 2626 119 21 26 chr5 14384793 14385220 -188700312 - MSTA LTR MaLR -3 425 1 941 283 172 40 chr5 14385220 14385261 -188700271 + L2 LINE L2 2754 2788 -526 1253 213 37 48 chr5 14385491 14385867 -188699665 - MLT1A2 LTR MaLR 0 374 3 1856 175 25 48 chr5 14386715 14387114 -188698418 - MLT1B LTR MaLR 0 390 1 685 174 132 4 chr5 14387114 14387321 -188698211 - MLT1G1 LTR MaLR -13 582 281 204 265 0 0 chr5 14387445 14387494 -188698038 + L2 LINE L2 3247 3295 -18 2435 100 0 0 chr5 14388572 14388882 -188696650 + AluSg SINE Alu 1 310 0 3781 88 30 2 chr5 14389444 14389981 -188695551 - L1PA10 LINE L1 -1 6167 5616 1522 172 72 60 chr5 14390127 14390587 -188694945 + MER31B LTR ERV1 1 661 0 351 268 70 7 chr5 14391197 14391339 -188694193 + L1ME2 LINE L1 4906 5056 -1090 329 331 111 12 chr5 14391532 14391704 -188693828 - MIR SINE MIR -41 221 33 532 295 88 32 chr5 14391832 14392242 -188693290 + L1ME2 LINE L1 5454 5886 -278 1921 141 74 52 chr5 14392285 14392690 -188692842 + MLT2D LTR ERVL 1 414 0 291 164 0 0 chr5 14393983 14394044 -188691488 + A-rich Low_complexity Low_complexity 1 61 0 22 35 0 0 chr5 14396434 14396463 -188689069 + AT_rich Low_complexity Low_complexity 1 29 0 216 217 0 0 chr5 14396950 14396996 -188688536 + L2 LINE L2 3267 3312 -1 1627 176 91 38 chr5 14397366 14397571 -188687961 + MLT1C LTR MaLR 3 196 -271 2205 134 27 21 chr5 14397571 14397944 -188687588 + THE1C LTR MaLR 1 375 0 1627 176 91 38 chr5 14397944 14398135 -188687397 + MLT1C LTR MaLR 196 420 -47 303 270 6 103 chr5 14398161 14398335 -188687197 - MIR SINE MIR -28 234 78 4186 204 102 36 chr5 14399143 14399758 -188685774 + Charlie1a DNA MER1_type 8 581 -2180 13560 36 0 0 chr5 14399758 14402174 -188683358 + L1PA4 LINE L1 3737 6154 -1 4186 204 102 36 chr5 14402174 14402915 -188682617 + Charlie1a DNA MER1_type 581 1454 -1 1920 158 23 0 chr5 14403346 14403649 -188681883 - AluJo SINE Alu -2 310 1 551 259 114 15 chr5 14403902 14404103 -188681429 + MIR SINE MIR 2 222 -40 21 0 0 0 chr5 14404119 14404140 -188681392 + AT_rich Low_complexity Low_complexity 1 21 0 206 296 133 10 chr5 14404539 14404637 -188680895 - MIR SINE MIR -67 141 32 815 142 32 53 chr5 14405742 14405932 -188679600 + MER53 DNA DNA 3 188 -1 1929 113 28 7 chr5 14406189 14406222 -188679310 - AluSg SINE Alu -20 290 259 207 0 0 0 chr5 14406222 14406245 -188679287 + (GGCTG)n Simple_repeat Simple_repeat 5 27 0 1929 113 28 7 chr5 14406245 14406495 -188679037 - AluSg SINE Alu -51 259 1 520 337 36 8 chr5 14408509 14408761 -188676771 + MIR SINE MIR 2 260 -2 2356 100 31 31 chr5 14408977 14409326 -188676206 + THE1B LTR MaLR 1 349 -15 344 50 0 0 chr5 14409327 14409367 -188676165 + THE1B LTR MaLR 316 355 0 221 57 29 0 chr5 14409483 14409518 -188676014 + (CA)n Simple_repeat Simple_repeat 2 37 0 194 105 26 0 chr5 14409553 14409591 -188675941 + (CA)n Simple_repeat Simple_repeat 2 40 0 318 169 96 36 chr5 14409665 14409748 -188675784 - MER69 DNA AcHobo -9 2517 2430 219 36 0 0 chr5 14410125 14410153 -188675379 + (CTTG)n Simple_repeat Simple_repeat 3 30 0 671 301 31 9 chr5 14410297 14410526 -188675006 - MIR SINE MIR -21 241 8 707 344 74 40 chr5 14410774 14411467 -188674065 - L2 LINE L2 -24 3248 2525 284 289 40 59 chr5 14412204 14412356 -188673176 + MARNA DNA Mariner 86 234 -352 360 0 0 0 chr5 14412483 14412523 -188673009 + (TG)n Simple_repeat Simple_repeat 2 41 0 1825 202 14 16 chr5 14412983 14413349 -188672183 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr5 14413392 14413420 -188672112 + AT_rich Low_complexity Low_complexity 1 28 0 821 156 106 110 chr5 14413482 14413700 -188671832 - MER58A DNA MER1_type -4 220 4 1975 156 178 6 chr5 14413950 14414315 -188671217 - MSTA LTR MaLR 0 428 1 3822 135 8 12 chr5 14414317 14414911 -188670621 + MSTA-int LTR MaLR 989 1580 0 1742 151 177 45 chr5 14414911 14415289 -188670243 + MSTA LTR MaLR 1 428 0 287 195 78 109 chr5 14415304 14415432 -188670100 - L2 LINE L2 -1 3312 3189 * 332 241 46 19 chr5 14415405 14415513 -188670019 + L2 LINE L2 3202 3312 -1 215 244 116 58 chr5 14415538 14415710 -188669822 + L2 LINE L2 2350 2531 -783 246 290 35 0 chr5 14415902 14416047 -188669485 + (CA)n Simple_repeat Simple_repeat 2 151 0 366 233 47 6 chr5 14416066 14416238 -188669294 + (CA)n Simple_repeat Simple_repeat 1 179 0 258 279 35 6 chr5 14416345 14416517 -188669015 + (CA)n Simple_repeat Simple_repeat 1 177 0 305 273 35 6 chr5 14416697 14416869 -188668663 + (CA)n Simple_repeat Simple_repeat 1 177 0 236 237 27 11 chr5 14416912 14417097 -188668435 + (CA)n Simple_repeat Simple_repeat 1 189 0 234 174 33 16 chr5 14417108 14417229 -188668303 + (CA)n Simple_repeat Simple_repeat 1 123 0 302 225 50 6 chr5 14417269 14417429 -188668103 + (CA)n Simple_repeat Simple_repeat 1 167 0 3081 48 11 0 chr5 14417474 14417825 -188667707 - THE1A LTR MaLR 0 355 1 2205 110 132 6 chr5 14418904 14419267 -188666265 - MSTA LTR MaLR -19 409 1 1578 154 0 54 chr5 14419547 14419845 -188665687 - AluJo SINE Alu -30 282 1 703 175 28 34 chr5 14420040 14420217 -188665315 - MER53 DNA DNA 0 189 14 195 239 22 0 chr5 14421350 14421396 -188664136 - MIR SINE MIR -9 253 207 1185 137 0 0 chr5 14421396 14421571 -188663961 - AluSg/x SINE Alu -5 307 133 252 267 40 0 chr5 14421571 14421646 -188663886 - MIR SINE MIR -48 214 137 360 0 0 0 chr5 14421646 14421686 -188663846 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3886 39 2 0 chr5 14421686 14422122 -188663410 - L1PA4 LINE L1 -18 6137 5701 1749 19 0 0 chr5 14422122 14422332 -188663200 + L1P2 LINE L1 5268 5477 -678 568 242 32 38 chr5 14422337 14422494 -188663038 - MIR SINE MIR -106 156 1 664 303 154 31 chr5 14423316 14424062 -188661470 + L2 LINE L2 925 1762 -1552 30 0 0 0 chr5 14424096 14424126 -188661406 + AT_rich Low_complexity Low_complexity 1 30 0 396 210 48 32 chr5 14424137 14424261 -188661271 - MIR SINE MIR -25 237 112 615 254 155 9 chr5 14424272 14424504 -188661028 + L2 LINE L2 3043 3308 -5 26 0 0 0 chr5 14424561 14424587 -188660945 + AT_rich Low_complexity Low_complexity 1 26 0 2071 127 0 0 chr5 14424677 14424998 -188660534 - AluSx SINE Alu 0 321 1 2224 123 48 31 chr5 14425655 14426013 -188659519 - THE1B LTR MaLR 0 364 1 248 109 0 22 chr5 14426896 14426942 -188658590 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr5 14428211 14428235 -188657297 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1092 195 45 84 chr5 14428238 14428525 -188657007 - AluJo SINE Alu -34 278 3 293 263 162 79 chr5 14428692 14428856 -188656676 - L2 LINE L2 -835 2479 2289 487 165 13 0 chr5 14428856 14428935 -188656597 - MADE1 DNA Mariner 0 80 1 293 263 162 79 chr5 14428935 14428998 -188656534 - L2 LINE L2 -1025 2289 2233 833 175 56 94 chr5 14430456 14430776 -188654756 - Charlie2 DNA MER1_type -413 2449 2142 * 2258 232 91 25 chr5 14430775 14431443 -188654089 + MER72 LTR ERV1 10 721 -1 278 231 0 0 chr5 14431446 14431511 -188654021 - Charlie2 DNA MER1_type -711 2151 2087 208 132 85 151 chr5 14432017 14432123 -188653409 - MER5A DNA MER1_type -77 112 14 345 239 231 17 chr5 14432923 14433040 -188652492 - MER5A DNA MER1_type -2 187 46 1644 162 3 44 chr5 14433464 14433779 -188651753 - AluJb SINE Alu -6 306 5 1896 131 47 86 chr5 14434050 14434345 -188651187 - MLT1B LTR MaLR 0 390 114 2091 125 3 0 chr5 14434345 14434632 -188650900 - AluSx SINE Alu -24 288 1 1896 131 47 86 chr5 14434632 14434742 -188650790 - MLT1B LTR MaLR -276 114 1 2577 52 0 40 chr5 14435367 14435691 -188649841 + AluY SINE Alu 1 311 0 1319 141 187 38 chr5 14435716 14435978 -188649554 + AluSq SINE Alu 1 301 -2 187 286 79 0 chr5 14436784 14436847 -188648685 + L2 LINE L2 3246 3313 0 22 70 0 0 chr5 14436900 14436943 -188648589 + AT_rich Low_complexity Low_complexity 1 43 0 1307 137 43 0 chr5 14436950 14437161 -188648371 + L1MA6 LINE L1 5996 6215 -85 2481 63 3 0 chr5 14437171 14437470 -188648062 + AluSp SINE Alu 1 300 -13 2305 159 55 14 chr5 14437645 14437909 -188647623 - L1MB4 LINE L1 -3 6177 5886 2124 144 86 12 chr5 14437909 14438248 -188647284 + THE1B LTR MaLR 1 364 0 2305 159 55 14 chr5 14438248 14438422 -188647110 - L1MB4 LINE L1 -294 5886 5721 1455 164 0 4 chr5 14438429 14438661 -188646871 - AluJb SINE Alu 0 312 82 225 273 30 0 chr5 14438897 14438963 -188646569 - MLT1F LTR MaLR -178 364 297 386 328 8 0 chr5 14439013 14439144 -188646388 - MLT1F LTR MaLR -393 149 18 768 155 28 14 chr5 14439374 14439516 -188646016 + L1MA6 LINE L1 6144 6287 -13 204 255 20 0 chr5 14440197 14440248 -188645284 + CT-rich Low_complexity Low_complexity 2 53 0 4354 102 18 55 chr5 14440803 14441461 -188644071 + MER51A LTR ERV1 1 634 0 408 262 18 24 chr5 14441822 14441986 -188643546 + (TA)n Simple_repeat Simple_repeat 1 163 0 183 42 0 0 chr5 14442022 14442046 -188643486 + (CA)n Simple_repeat Simple_repeat 1 24 0 2704 23 7 3 chr5 14444105 14444415 -188641117 - AluY SINE Alu 0 311 1 697 142 0 71 chr5 14444654 14444758 -188640774 + MLT1C LTR MaLR 350 445 -22 1696 170 106 6 chr5 14444758 14445088 -188640444 + MLT1A1 LTR MaLR 3 365 0 697 142 0 71 chr5 14445088 14445110 -188640422 + MLT1C LTR MaLR 445 467 0 287 271 149 56 chr5 14445595 14445916 -188639616 + L3 LINE CR1 587 937 -640 371 297 16 0 chr5 14445981 14446109 -188639423 + MIR SINE MIR 107 236 -26 463 303 62 43 chr5 14446367 14446575 -188638957 + L3 LINE CR1 1264 1475 -102 1651 170 10 17 chr5 14446904 14447198 -188638334 + AluJo SINE Alu 2 293 -19 2414 28 43 0 chr5 14449301 14449583 -188635949 + AluY SINE Alu 2 295 -16 186 43 0 0 chr5 14449732 14449755 -188635777 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 183 80 0 0 chr5 14450945 14450970 -188634562 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 237 65 0 0 chr5 14453615 14453646 -188631886 + (A)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr5 14454357 14454391 -188631141 + AT_rich Low_complexity Low_complexity 1 34 0 630 265 57 14 chr5 14454497 14454708 -188630824 - MIR SINE MIR -33 229 10 1978 111 0 4 chr5 14455067 14455329 -188630203 + AluSg SINE Alu 35 295 -15 36 23 0 0 chr5 14455532 14455575 -188629957 + AT_rich Low_complexity Low_complexity 1 43 0 661 111 0 0 chr5 14457598 14457688 -188627844 + L1PA10 LINE L1 6018 6107 -61 922 132 7 0 chr5 14457603 14457747 -188627785 + L1PA10 LINE L1 6023 6167 -1 180 0 0 0 chr5 14458240 14458260 -188627272 + (T)n Simple_repeat Simple_repeat 1 20 0 344 285 158 23 chr5 14458314 14458535 -188626997 - MIR SINE MIR -11 251 1 2236 108 0 3 chr5 14458700 14458995 -188626537 + AluSg SINE Alu 1 294 -16 2447 203 38 9 chr5 14459783 14460418 -188625114 + L1MA6 LINE L1 2482 3134 -3012 7505 160 18 25 chr5 14460435 14463018 -188622514 + L1MA6 LINE L1 3730 6295 -5 25 0 0 0 chr5 14463772 14463797 -188621735 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr5 14466193 14466217 -188619315 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2151 103 0 0 chr5 14466217 14466498 -188619034 - AluSq SINE Alu -32 281 1 818 194 0 0 chr5 14466499 14466633 -188618899 - AluJo SINE Alu -178 134 1 393 286 70 41 chr5 14466641 14466812 -188618720 + MIR SINE MIR 51 226 -36 1331 242 21 6 chr5 14467996 14468326 -188617206 - MER58B DNA MER1_type 0 341 7 23 33 0 0 chr5 14471840 14471870 -188613662 + AT_rich Low_complexity Low_complexity 1 30 0 360 322 61 22 chr5 14473902 14474082 -188611450 + MIR SINE MIR 25 211 -51 463 262 202 57 chr5 14474763 14475095 -188610437 - L2 LINE L2 -4 3309 2930 355 341 28 34 chr5 14475398 14475577 -188609955 - MER5A DNA MER1_type -3 186 9 544 206 0 9 chr5 14477916 14478023 -188607509 - MER5A DNA MER1_type -80 109 4 235 144 115 4 chr5 14478091 14478145 -188607387 - Alu SINE Alu -254 47 2 748 164 8 8 chr5 14478431 14478553 -188606979 - FLAM_A SINE Alu -10 123 2 261 279 81 68 chr5 14478687 14478848 -188606684 + MER5B DNA MER1_type 1 163 -15 261 0 0 0 chr5 14479953 14479982 -188605550 + (T)n Simple_repeat Simple_repeat 1 29 0 26 0 0 0 chr5 14480562 14480588 -188604944 + AT_rich Low_complexity Low_complexity 1 26 0 1715 163 82 18 chr5 14481069 14481412 -188604120 + MLT1A1 LTR MaLR 1 365 0 315 0 0 0 chr5 14481490 14481525 -188604007 + (TG)n Simple_repeat Simple_repeat 2 36 0 2245 107 0 19 chr5 14482222 14482532 -188603000 - AluSg SINE Alu -6 304 1 546 297 17 17 chr5 14484531 14484706 -188600826 + MIR SINE MIR 18 192 -70 21 71 0 0 chr5 14484709 14484751 -188600781 + AT_rich Low_complexity Low_complexity 1 42 0 1509 321 51 34 chr5 14486048 14486804 -188598728 + L2 LINE L2 2269 3036 -277 2281 84 0 0 chr5 14486863 14487190 -188598342 + AluY SINE Alu 1 327 0 821 120 0 0 chr5 14487190 14487315 -188598217 + L1PA16 LINE L1 6034 6158 -8 261 308 179 0 chr5 14487374 14487491 -188598041 + L2 LINE L2 3167 3304 -9 1829 129 4 14 chr5 14487494 14487773 -188597759 + AluSx SINE Alu 1 276 -36 459 0 0 0 chr5 14487773 14487824 -188597708 + (TG)n Simple_repeat Simple_repeat 2 52 0 484 290 116 99 chr5 14489802 14490340 -188595192 - L1M2 LINE L1 -5708 1141 585 216 0 0 0 chr5 14490340 14490364 -188595168 + (CGG)n Simple_repeat Simple_repeat 3 26 0 484 290 116 99 chr5 14490364 14490586 -188594946 - L1M2 LINE L1 -6264 585 368 203 204 0 23 chr5 14491785 14491829 -188593703 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 417 206 186 0 chr5 14491892 14491989 -188593543 + L2 LINE L2 3192 3306 -7 621 262 12 23 chr5 14492192 14492364 -188593168 + MER5B DNA MER1_type 7 176 -2 393 253 74 79 chr5 14492376 14492566 -188592966 + MER5A DNA MER1_type 1 189 0 344 271 12 0 chr5 14492582 14492667 -188592865 - MER5A DNA MER1_type -87 102 17 593 219 84 11 chr5 14493487 14493665 -188591867 + MER3 DNA MER1_type 19 209 0 1468 156 58 56 chr5 14494905 14495265 -188590267 + MER46B DNA MER2_type 1 236 0 226 214 0 0 chr5 14497230 14497272 -188588260 + GA-rich Low_complexity Low_complexity 1 42 0 695 264 153 42 chr5 14498989 14499537 -188585995 + L2 LINE L2 2687 3312 -1 25 0 0 0 chr5 14502554 14502579 -188582953 + AT_rich Low_complexity Low_complexity 1 25 0 204 304 94 47 chr5 14505898 14506069 -188579463 - MIR SINE MIR -56 206 28 442 313 99 30 chr5 14506761 14506994 -188578538 - MIR SINE MIR 0 262 14 2762 70 3 8 chr5 14508211 14508580 -188576952 - L1PA8 LINE L1 -1 6171 5805 224 303 11 11 chr5 14509044 14509133 -188576399 + L2 LINE L2 2968 3056 -257 328 136 136 12 chr5 14509152 14509233 -188576299 - Charlie1 DNA MER1_type -1 2760 2670 621 275 38 0 chr5 14509258 14509469 -188576063 - Charlie1 DNA MER1_type -2536 225 7 217 296 70 26 chr5 14509491 14509606 -188575926 + L2 LINE L2 3106 3225 -88 2174 122 26 0 chr5 14509783 14510087 -188575445 - AluSx SINE Alu 0 312 1 989 193 17 0 chr5 14510596 14510777 -188574755 + AluSc SINE Alu 117 300 -9 1976 116 7 0 chr5 14511072 14511347 -188574185 + AluSq SINE Alu 29 305 -8 417 173 27 55 chr5 14513138 14513248 -188572284 + LTR33 LTR ERVL 114 220 -301 421 296 40 11 chr5 14513264 14513440 -188572092 + LTR33 LTR ERVL 341 521 0 403 343 85 45 chr5 14514319 14514957 -188570575 - L1M4 LINE L1 -3216 2930 2268 24 0 0 0 chr5 14515178 14515202 -188570330 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 14515632 14515653 -188569879 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 14515733 14515777 -188569755 + AT_rich Low_complexity Low_complexity 1 44 0 2234 114 0 7 chr5 14516052 14516349 -188569183 - AluSg SINE Alu -15 295 1 24 67 0 0 chr5 14518463 14518508 -188567024 + AT_rich Low_complexity Low_complexity 1 45 0 289 310 44 44 chr5 14518734 14518892 -188566640 - MER5A DNA MER1_type -1 188 31 * 358 314 26 39 chr5 14518755 14518911 -188566621 + MER5A DNA MER1_type 35 188 -1 1241 239 136 21 chr5 14519094 14519529 -188566003 + MLT1D LTR MaLR 21 505 0 198 288 201 29 chr5 14519611 14519750 -188565782 - MIR SINE MIR -48 214 52 4698 100 29 0 chr5 14519778 14520459 -188565073 - L1PA14 LINE L1 0 6161 5461 1334 212 0 47 chr5 14520511 14520808 -188564724 + AluJo SINE Alu 13 295 -17 28 0 0 0 chr5 14521470 14521498 -188564034 + AT_rich Low_complexity Low_complexity 1 28 0 559 309 78 9 chr5 14522235 14522452 -188563080 - MIR SINE MIR -2 260 29 383 240 12 29 chr5 14522482 14522653 -188562879 + L1ME LINE L1 5135 5302 -844 572 291 97 15 chr5 14522711 14523103 -188562429 + L1ME LINE L1 5350 5773 -397 2319 123 5 46 chr5 14523129 14523302 -188562230 + HSMAR2 DNA Mariner 2 181 -1121 2213 95 3 0 chr5 14523302 14523621 -188561911 + AluSp SINE Alu 1 320 0 2319 123 5 46 chr5 14523621 14523862 -188561670 + HSMAR2 DNA Mariner 181 400 -902 402 100 29 0 chr5 14523896 14523966 -188561566 + HSMAR2 DNA Mariner 1230 1301 -1 345 205 0 0 chr5 14524136 14524248 -188561284 + (TA)n Simple_repeat Simple_repeat 1 112 0 2073 128 3 3 chr5 14525220 14525525 -188560007 + AluSg SINE Alu 1 305 -5 472 288 58 17 chr5 14526230 14526470 -188559062 + MER41B LTR ERV1 181 430 -205 365 258 25 55 chr5 14527029 14527177 -188558355 + MIR SINE MIR 93 233 -29 1239 217 239 11 chr5 14529275 14529630 -188555902 + L1MD2 LINE L1 5687 5960 -399 231 114 0 0 chr5 14529630 14529665 -188555867 + (CA)n Simple_repeat Simple_repeat 2 36 0 1239 217 239 11 chr5 14529665 14529844 -188555688 + L1MD2 LINE L1 5960 6343 -16 190 179 36 0 chr5 14529991 14530047 -188555485 + GA-rich Low_complexity Low_complexity 3 60 0 1744 183 121 7 chr5 14530986 14531417 -188554115 + MER31A LTR ERV1 1 480 -5 4447 208 47 21 chr5 14531516 14532453 -188553079 + MER45B DNA AcHobo 2 968 -613 2147 141 0 7 chr5 14532453 14532757 -188552775 - AluSx SINE Alu -10 302 1 4447 208 47 21 chr5 14532757 14532821 -188552711 + MER45B DNA AcHobo 968 1029 -11 2683 77 9 0 chr5 14533023 14533373 -188552159 - THE1A LTR MaLR -2 353 1 204 309 49 89 chr5 14533629 14533752 -188551780 + L2 LINE L2 3063 3180 -92 2177 123 3 0 chr5 14535147 14535448 -188550084 + AluSg SINE Alu 1 302 -8 696 283 86 47 chr5 14536524 14537058 -188548474 + MLT1H1 LTR MaLR 1 555 0 21 57 0 0 chr5 14537215 14537250 -188548282 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 14537299 14537319 -188548213 + (T)n Simple_repeat Simple_repeat 1 20 0 2348 83 0 7 chr5 14538140 14538440 -188547092 + AluY SINE Alu 1 298 -13 2307 249 30 31 chr5 14538460 14538600 -188546932 + L1ME2 LINE L1 5381 5520 -644 2264 166 36 24 chr5 14538600 14539021 -188546511 - MSTB LTR MaLR 0 426 1 2307 249 30 31 chr5 14539021 14539467 -188546065 + L1ME2 LINE L1 5520 5968 -196 183 80 0 0 chr5 14539467 14539492 -188546040 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2307 249 30 31 chr5 14539492 14539679 -188545853 + L1ME2 LINE L1 5968 6154 -10 2273 75 0 26 chr5 14540280 14540619 -188544913 - AluY SINE Alu 0 311 1 668 257 74 0 chr5 14540621 14540823 -188544709 - MER58A DNA MER1_type -6 218 2 337 308 67 47 chr5 14541354 14541607 -188543925 + L3 LINE CR1 1314 1571 -6 294 258 21 43 chr5 14543443 14543536 -188541996 - L2 LINE L2 0 3313 3223 903 146 0 7 chr5 14544715 14544852 -188540680 - FRAM SINE Alu -18 158 23 549 0 0 0 chr5 14544918 14544979 -188540553 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 216 158 0 0 chr5 14544979 14545017 -188540515 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 760 164 0 22 chr5 14545017 14545151 -188540381 - FLAM_C SINE Alu -2 131 1 2076 109 0 70 chr5 14546546 14546877 -188538655 - AluSg SINE Alu -2 308 1 334 307 92 6 chr5 14547236 14547399 -188538133 - L1ME4a LINE L1 -22 6099 5923 242 92 58 42 chr5 14547955 14548075 -188537457 + (TTATA)n Simple_repeat Simple_repeat 5 126 0 210 129 81 0 chr5 14548103 14548165 -188537367 + (TA)n Simple_repeat Simple_repeat 2 68 0 859 58 53 12 chr5 14548347 14548518 -188537014 + (TG)n Simple_repeat Simple_repeat 1 178 0 318 82 71 0 chr5 14548564 14548649 -188536883 + (TG)n Simple_repeat Simple_repeat 1 91 0 246 339 51 17 chr5 14548927 14549045 -188536487 + MIR SINE MIR 51 172 -90 1543 150 0 0 chr5 14549682 14549902 -188535630 + AluSg/x SINE Alu 86 305 -7 1352 238 75 23 chr5 14550180 14550617 -188534915 - MLT1C LTR MaLR -6 461 2 2104 135 0 7 chr5 14551144 14551448 -188534084 - AluSx SINE Alu -8 304 3 285 332 72 10 chr5 14551491 14551684 -188533848 + MLT1I LTR MaLR 5 209 -200 1624 157 8 4 chr5 14552280 14552547 -188532985 + AluSx SINE Alu 42 309 -3 27 73 0 0 chr5 14553470 14553525 -188532007 + AT_rich Low_complexity Low_complexity 1 55 0 1589 146 3 106 chr5 14553859 14554180 -188531352 - AluJb SINE Alu -14 288 1 450 312 37 21 chr5 14554862 14555051 -188530481 + L2 LINE L2 3106 3297 -16 2483 82 0 3 chr5 14555795 14556101 -188529431 + AluSg SINE Alu 1 305 -5 42 0 0 0 chr5 14556241 14556283 -188529249 + AT_rich Low_complexity Low_complexity 1 42 0 1145 135 140 0 chr5 14556621 14556828 -188528704 + MER46A DNA MER2_type 1 236 0 221 300 30 80 chr5 14558245 14558345 -188527187 - MIR SINE MIR -147 115 21 2229 113 0 0 chr5 14559324 14559626 -188525906 + AluSc SINE Alu 8 309 0 2064 125 3 19 chr5 14559768 14560079 -188525453 - AluSx SINE Alu -6 306 1 180 0 0 0 chr5 14561126 14561146 -188524386 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 260 270 0 0 chr5 14562200 14562263 -188523269 - MIR SINE MIR -23 239 177 1196 131 44 48 chr5 14562302 14562508 -188523024 + AluJo SINE Alu 6 210 -102 261 283 135 10 chr5 14562658 14562754 -188522778 - MIR SINE MIR -95 113 16 338 263 291 28 chr5 14563120 14563299 -188522233 + MIR SINE MIR 24 249 -13 1555 174 9 62 chr5 14563926 14564247 -188521285 - AluJo SINE Alu -8 304 1 286 284 0 23 chr5 14564281 14564369 -188521163 + MIR SINE MIR 177 262 0 355 275 265 28 chr5 14565736 14565947 -188519585 + L2 LINE L2 2815 2975 -338 1973 127 35 0 chr5 14565947 14566230 -188519302 + AluSc SINE Alu 1 293 -16 355 275 265 28 chr5 14566230 14566414 -188519118 + L2 LINE L2 2975 3304 -9 277 288 62 0 chr5 14566821 14566901 -188518631 - MIR3 SINE MIR 0 208 124 25 31 0 0 chr5 14567815 14567847 -188517685 + AT_rich Low_complexity Low_complexity 1 32 0 31 0 0 0 chr5 14567916 14567947 -188517585 + AT_rich Low_complexity Low_complexity 1 31 0 567 211 139 36 chr5 14569279 14569473 -188516059 - L2 LINE L2 -1 3312 3099 649 325 146 2 chr5 14569545 14570003 -188515529 - L2 LINE L2 -337 2977 2454 1556 159 35 0 chr5 14571211 14571443 -188514089 - AluJo SINE Alu -36 276 37 637 294 134 43 chr5 14573823 14574375 -188511157 - L1MEd LINE L1 -5233 886 285 2139 171 13 50 chr5 14575287 14575331 -188510201 - L1MC3 LINE L1 -19 7766 7722 2217 112 10 0 chr5 14575331 14575625 -188509907 + AluSp SINE Alu 1 297 -16 2139 171 13 50 chr5 14575625 14576055 -188509477 - L1MC3 LINE L1 -63 7722 7310 351 0 0 0 chr5 14576132 14576171 -188509361 + (TA)n Simple_repeat Simple_repeat 2 40 0 2312 91 0 0 chr5 14576171 14576468 -188509064 - AluY SINE Alu -14 297 1 1049 171 23 0 chr5 14578111 14578286 -188507246 + AluSg/x SINE Alu 129 307 -5 1873 149 3 37 chr5 14581041 14581362 -188504170 - AluJb SINE Alu -2 310 1 423 301 29 0 chr5 14581520 14581656 -188503876 - MIR SINE MIR -26 236 97 1509 174 0 46 chr5 14582573 14582876 -188502656 - AluJo SINE Alu 0 312 32 5037 147 12 20 chr5 14584204 14585491 -188500041 - L1PA13 LINE L1 -21 6142 4864 369 0 0 0 chr5 14585837 14585878 -188499654 + (TG)n Simple_repeat Simple_repeat 2 42 0 525 246 29 6 chr5 14586400 14586571 -188498961 - MER96B DNA MER1_type? -241 176 2 1130 163 49 0 chr5 14586617 14586801 -188498731 + AluJb SINE Alu 86 278 -34 519 135 0 0 chr5 14586801 14586897 -188498635 + (GA)n Simple_repeat Simple_repeat 1 96 0 824 303 101 51 chr5 14587622 14588691 -188496841 - L2 LINE L2 0 3313 2197 657 296 107 70 chr5 14590129 14590548 -188494984 + L1MC/D LINE L1 4181 4583 -1661 297 75 0 0 chr5 14590548 14590588 -188494944 + (TG)n Simple_repeat Simple_repeat 1 40 0 657 296 107 70 chr5 14590588 14591415 -188494117 + L1MC/D LINE L1 4583 5478 -766 406 266 32 19 chr5 14591721 14591875 -188493657 + GA-rich Low_complexity Low_complexity 4 159 0 23 33 0 0 chr5 14592015 14592045 -188493487 + AT_rich Low_complexity Low_complexity 1 30 0 1362 204 137 0 chr5 14592767 14593125 -188492407 - MER63B DNA MER1_type -29 407 1 2289 249 47 20 chr5 14593792 14594572 -188490960 - L1ME1 LINE L1 -50 6116 5316 22 56 0 0 chr5 14594965 14595001 -188490531 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 14595535 14595571 -188489961 + AT_rich Low_complexity Low_complexity 1 36 0 195 167 0 0 chr5 14595812 14595854 -188489678 + (CA)n Simple_repeat Simple_repeat 2 43 0 950 194 0 11 chr5 14596040 14596215 -188489317 + AluJb SINE Alu 137 309 -3 736 241 25 63 chr5 14596534 14596771 -188488761 - MIR SINE MIR -21 241 14 208 318 0 16 chr5 14597578 14597704 -188487828 + (TA)n Simple_repeat Simple_repeat 1 124 0 330 26 0 0 chr5 14597704 14597743 -188487789 + (TG)n Simple_repeat Simple_repeat 2 40 0 236 284 0 16 chr5 14597823 14597950 -188487582 + (TA)n Simple_repeat Simple_repeat 1 125 0 1659 143 42 4 chr5 14597985 14598244 -188487288 + AluSx SINE Alu 1 269 -43 474 136 0 0 chr5 14598244 14598310 -188487222 + Alu SINE Alu 219 284 -26 21 71 0 0 chr5 14599127 14599169 -188486363 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr5 14599670 14599708 -188485824 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 14600571 14600601 -188484931 + AT_rich Low_complexity Low_complexity 1 30 0 291 259 140 28 chr5 14602601 14602744 -188482788 - L2 LINE L2 -231 3082 2924 324 300 94 11 chr5 14604639 14604819 -188480713 - L1MC5 LINE L1 -64 7897 7703 417 284 58 8 chr5 14604920 14605163 -188480369 - L1MC5 LINE L1 -370 7591 7337 239 235 59 0 chr5 14605448 14605499 -188480033 + L2 LINE L2 3210 3263 -9 1203 192 43 34 chr5 14606766 14606918 -188478614 + MLT1A1 LTR MaLR 10 159 -206 2269 88 3 61 chr5 14606918 14607247 -188478285 + AluY SINE Alu 1 310 -1 1203 192 43 34 chr5 14607247 14607443 -188478089 + MLT1A1 LTR MaLR 159 361 -4 251 313 61 10 chr5 14607446 14607545 -188477987 - L2 LINE L2 -19 3294 3191 29 47 0 0 chr5 14607685 14607728 -188477804 + AT_rich Low_complexity Low_complexity 1 43 0 605 276 74 10 chr5 14607766 14607969 -188477563 + L2 LINE L2 62 277 -3037 246 62 0 0 chr5 14609441 14609473 -188476059 + (CTG)n Simple_repeat Simple_repeat 1 32 0 333 369 43 0 chr5 14611384 14611525 -188474007 + MIR SINE MIR 6 152 -110 633 272 56 12 chr5 14611619 14611869 -188473663 + L1MA9 LINE L1 6015 6275 -37 222 318 82 0 chr5 14612221 14612306 -188473226 + L2 LINE L2 2544 2635 -679 2201 115 3 0 chr5 14613818 14614113 -188471419 + AluSx SINE Alu 1 296 -16 212 330 52 31 chr5 14614869 14614966 -188470566 - L3b LINE CR1 -4 1579 1481 1604 160 7 41 chr5 14615127 14615421 -188470111 - AluJo SINE Alu -19 293 10 245 318 24 12 chr5 14615482 14615567 -188469965 + MER5A DNA MER1_type 12 97 -92 2132 116 3 3 chr5 14615840 14616132 -188469400 + AluSx SINE Alu 4 295 -17 252 229 85 102 chr5 14616590 14616708 -188468824 - MIR SINE MIR -71 137 22 26 0 0 0 chr5 14616798 14616824 -188468708 + AT_rich Low_complexity Low_complexity 1 26 0 793 216 6 23 chr5 14617291 14617462 -188468070 + MER45A DNA AcHobo 9 176 -2 24 0 0 0 chr5 14619129 14619153 -188466379 + AT_rich Low_complexity Low_complexity 1 24 0 1223 171 4 34 chr5 14619166 14619400 -188466132 + AluJo SINE Alu 83 309 -3 214 149 21 21 chr5 14619429 14619476 -188466056 + (TA)n Simple_repeat Simple_repeat 1 47 0 942 147 21 0 chr5 14619998 14620141 -188465391 - AluSg/x SINE Alu -20 290 145 1374 176 8 31 chr5 14621042 14621303 -188464229 + AluJo SINE Alu 37 291 -21 1898 237 60 21 chr5 14621439 14621525 -188464007 + L1M4 LINE L1 4066 4147 -1999 243 0 0 0 chr5 14621525 14621552 -188463980 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1898 237 60 21 chr5 14621552 14622116 -188463416 + L1M4 LINE L1 4147 4741 -1405 788 149 65 0 chr5 14622635 14622789 -188462743 - L1MA9 LINE L1 -6 6306 6143 1534 69 0 5 chr5 14622789 14622988 -188462544 + L1PA8 LINE L1 5967 6169 -3 32 0 0 0 chr5 14622988 14623020 -188462512 + AT_rich Low_complexity Low_complexity 1 32 0 478 169 0 0 chr5 14623030 14623113 -188462419 - L1MA9 LINE L1 -173 6139 6057 709 176 7 0 chr5 14623116 14623258 -188462274 + L1MA9 LINE L1 5898 6040 -272 625 176 0 0 chr5 14623269 14623371 -188462161 + Tigger3(Golem) DNA MER2_type 9 110 -2919 * 3782 104 60 53 chr5 14623360 14624107 -188461425 + Tigger3(Golem) DNA MER2_type 2277 3028 -1 189 0 0 0 chr5 14624194 14624215 -188461317 + (CA)n Simple_repeat Simple_repeat 2 22 0 213 384 88 8 chr5 14624273 14624398 -188461134 - MIR SINE MIR -115 147 13 559 344 166 11 chr5 14624418 14624773 -188460759 + L2 LINE L2 1757 2166 -1148 204 67 0 0 chr5 14624931 14624961 -188460571 + (TAGG)n Simple_repeat Simple_repeat 2 31 0 2296 107 0 25 chr5 14625042 14625360 -188460172 + AluSq SINE Alu 1 310 -3 417 249 16 124 chr5 14626517 14626710 -188458822 + MIR SINE MIR 90 261 -1 195 314 0 0 chr5 14626814 14626865 -188458667 + L2 LINE L2 3215 3265 -7 218 287 293 7 chr5 14627453 14627603 -188457929 + MIR3 SINE MIR 10 202 -6 2339 160 82 29 chr5 14630824 14631087 -188454445 + MER6A DNA MER2_type 67 315 -550 2006 151 10 0 chr5 14631087 14631386 -188454146 - AluSx SINE Alu -10 302 1 2339 160 82 29 chr5 14631386 14631634 -188453898 + MER6A DNA MER2_type 315 605 0 388 260 20 10 chr5 14631790 14631890 -188453642 - MIR SINE MIR -47 215 115 2306 170 85 4 chr5 14631890 14632432 -188453100 + L1MB4 LINE L1 5595 6180 0 330 272 22 66 chr5 14632435 14632571 -188452961 - MIR SINE MIR -132 130 1 181 266 137 73 chr5 14632913 14633037 -188452495 + L2 LINE L2 3138 3269 -3 2053 136 7 0 chr5 14636527 14636828 -188448704 + AluSx SINE Alu 1 303 -9 696 258 95 28 chr5 14637162 14637445 -188448087 + LTR16A LTR ERVL 56 357 -93 217 318 61 0 chr5 14637725 14637791 -188447741 - L2 LINE L2 -22 3291 3222 409 263 44 18 chr5 14638942 14639056 -188446476 - MER5A DNA MER1_type -65 124 8 1881 137 43 10 chr5 14639517 14639816 -188445716 + AluSq SINE Alu 2 310 -3 2111 108 14 3 chr5 14640091 14640388 -188445144 + AluSq SINE Alu 1 300 -13 410 273 62 0 chr5 14641102 14641230 -188444302 + MIR SINE MIR 124 259 -3 1766 181 3 10 chr5 14641233 14641547 -188443985 - AluJo SINE Alu 0 312 1 3857 86 0 0 chr5 14641557 14642067 -188443465 + L1PB1 LINE L1 5641 6150 -1 514 250 31 66 chr5 14642118 14642314 -188443218 + MER5A DNA MER1_type 1 189 0 2265 96 0 19 chr5 14644935 14645247 -188440285 + AluSx SINE Alu 1 306 -6 1713 136 27 0 chr5 14645697 14645955 -188439577 - AluSx SINE Alu -9 303 39 262 231 179 43 chr5 14645999 14646116 -188439416 + MIR SINE MIR 130 262 0 513 279 18 18 chr5 14646309 14646474 -188439058 + MER5B DNA MER1_type 14 178 0 566 209 41 102 chr5 14646996 14647240 -188438292 - MER106A DNA MER1_type -5 231 3 367 149 27 0 chr5 14648746 14648820 -188436712 + L1MB8 LINE L1 6097 6172 -6 477 307 47 25 chr5 14648995 14649272 -188436260 + L1MEd LINE L1 543 825 -5294 596 82 0 0 chr5 14649355 14649440 -188436092 - AluY SINE Alu -9 302 218 1048 218 87 3 chr5 14649517 14649815 -188435717 + L1ME1 LINE L1 5517 5839 -327 1808 112 7 86 chr5 14649884 14650020 -188435512 + AluSx SINE Alu 1 101 -211 2281 96 3 16 chr5 14650020 14650334 -188435198 + AluSg SINE Alu 1 310 0 1808 112 7 86 chr5 14650334 14650501 -188435031 + AluSx SINE Alu 101 280 -32 192 40 0 0 chr5 14650501 14650526 -188435006 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1933 136 36 7 chr5 14650573 14650875 -188434657 + AluSx SINE Alu 1 311 -1 911 200 109 115 chr5 14650898 14651468 -188434064 + L1MB5 LINE L1 5599 6166 -8 258 248 73 9 chr5 14651651 14651760 -188433772 + L1 LINE L1 4224 4339 -1807 327 314 64 59 chr5 14651985 14652174 -188433358 + L1ME3 LINE L1 4821 5014 -1132 1951 129 18 0 chr5 14652174 14652511 -188433021 + AluSx SINE Alu 1 342 0 327 314 64 59 chr5 14652511 14652556 -188432976 + L1ME3 LINE L1 5014 5057 -1089 465 304 96 29 chr5 14652720 14653367 -188432165 + L1ME3 LINE L1 5257 5946 -216 499 271 85 34 chr5 14655238 14655474 -188430058 - MIR SINE MIR -3 259 12 1213 169 111 29 chr5 14656621 14656773 -188428759 - AluJb SINE Alu 0 302 164 2237 121 0 6 chr5 14656773 14657087 -188428445 - AluSq SINE Alu 0 313 2 1213 169 111 29 chr5 14657087 14657213 -188428319 - AluJb SINE Alu -138 164 1 196 326 49 12 chr5 14657757 14657891 -188427641 - MIR SINE MIR -68 140 3 321 346 57 13 chr5 14659685 14659844 -188425688 + MIR SINE MIR 97 262 0 185 108 27 0 chr5 14660098 14660135 -188425397 + (TA)n Simple_repeat Simple_repeat 1 38 0 203 161 0 0 chr5 14660282 14660313 -188425219 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr5 14661316 14661339 -188424193 + AT_rich Low_complexity Low_complexity 1 23 0 983 265 71 82 chr5 14662366 14662997 -188422535 - MLT1E3 LTR MaLR 0 624 1 289 353 39 13 chr5 14663357 14663510 -188422022 - L2 LINE L2 0 3272 3116 387 0 0 0 chr5 14663531 14663574 -188421958 + (TG)n Simple_repeat Simple_repeat 1 43 0 1678 165 4 14 chr5 14663578 14663857 -188421675 - AluJb SINE Alu -33 279 4 435 238 111 22 chr5 14663924 14664105 -188421427 + MIR SINE MIR 5 201 -61 312 375 21 0 chr5 14665238 14665382 -188420150 + MIR SINE MIR 108 254 -8 2056 124 0 23 chr5 14666951 14667250 -188418282 + AluSx SINE Alu 1 292 -20 276 229 176 46 chr5 14669239 14669392 -188416140 + MLT1J2 LTR MaLR 256 428 -22 350 324 87 27 chr5 14670393 14670578 -188414954 + MIR SINE MIR 51 246 -16 317 326 0 16 chr5 14672061 14672190 -188413342 - L1MEc LINE L1 -4604 1792 1666 514 93 0 23 chr5 14672338 14672424 -188413108 - Alu SINE Alu -3 309 226 868 251 56 48 chr5 14672426 14672928 -188412604 - L1MEc LINE L1 -4915 1481 976 1631 263 140 6 chr5 14672941 14673568 -188411964 - L1MEc LINE L1 -5466 930 220 936 158 14 53 chr5 14674940 14675201 -188410331 + MLT1A1 LTR MaLR 3 365 0 2540 265 149 50 chr5 14675230 14676976 -188408556 - HAL1 LINE L1 -421 2086 168 417 238 54 81 chr5 14676977 14677162 -188408370 + MER104 DNA Tc2 1 180 0 393 272 221 26 chr5 14678237 14678432 -188407100 + MIR SINE MIR 30 262 0 384 267 144 28 chr5 14679419 14679599 -188405933 - MIR SINE MIR -13 249 49 273 386 18 6 chr5 14679789 14679952 -188405580 + L3 LINE CR1 995 1159 -418 241 327 40 7 chr5 14680873 14681023 -188404509 + L2 LINE L2 1949 2103 -1211 381 348 148 28 chr5 14681145 14681536 -188403996 + L2 LINE L2 2342 2779 -535 44 63 0 0 chr5 14681547 14681626 -188403906 + AT_rich Low_complexity Low_complexity 1 79 0 2160 101 0 0 chr5 14683572 14683850 -188401682 + AluSg SINE Alu 1 278 -32 351 44 0 0 chr5 14683852 14683897 -188401635 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 190 243 27 54 chr5 14683918 14683992 -188401540 - MIR SINE MIR -126 136 65 24 32 0 0 chr5 14684339 14684370 -188401162 + AT_rich Low_complexity Low_complexity 1 31 0 216 294 153 0 chr5 14685408 14685493 -188400039 - MIR SINE MIR -109 153 56 770 328 153 33 chr5 14685762 14686665 -188398867 - L3 LINE CR1 -7 1570 560 268 240 62 27 chr5 14687100 14687246 -188398286 + Charlie7 DNA MER1_type 2462 2612 0 212 319 0 0 chr5 14687389 14687458 -188398074 - MIR3 SINE MIR -41 167 99 21 0 0 0 chr5 14690624 14690645 -188394887 + AT_rich Low_complexity Low_complexity 1 21 0 422 0 38 0 chr5 14690665 14690718 -188394814 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 578 307 109 60 chr5 14690746 14691322 -188394210 - L2 LINE L2 -37 3276 2665 324 0 0 0 chr5 14694477 14694513 -188391019 + (CA)n Simple_repeat Simple_repeat 2 37 0 2280 88 7 0 chr5 14695248 14695544 -188389988 - AluY SINE Alu -13 298 1 608 265 100 28 chr5 14695893 14696142 -188389390 + LTR7 LTR ERV1 184 450 0 275 365 7 0 chr5 14696428 14696573 -188388959 - HAL1b LINE L1 -829 519 374 779 147 6 0 chr5 14697312 14697489 -188388043 + CT-rich Low_complexity Low_complexity 1 178 0 183 42 0 0 chr5 14697489 14697513 -188388019 + (TTCC)n Simple_repeat Simple_repeat 4 27 0 574 282 55 0 chr5 14697939 14698194 -188387338 + L1ME3A LINE L1 4638 4906 -1240 427 246 42 36 chr5 14698312 14698479 -188387053 + L1ME3A LINE L1 5065 5232 -914 852 281 69 46 chr5 14698533 14698635 -188386897 + L1ME3A LINE L1 5301 5399 -771 2534 114 6 0 chr5 14698635 14698996 -188386536 + THE1B LTR MaLR 1 363 -1 852 281 69 46 chr5 14698996 14699459 -188386073 + L1ME3A LINE L1 5399 5879 -291 355 91 127 0 chr5 14699479 14699534 -188385998 + MADE1 DNA Mariner 1 62 -18 21 36 0 0 chr5 14700627 14700655 -188384877 + AT_rich Low_complexity Low_complexity 1 28 0 1445 203 57 0 chr5 14702761 14703042 -188382490 - AluJb SINE Alu -15 297 1 412 183 61 0 chr5 14703267 14703349 -188382183 - MIR SINE MIR -90 172 86 1786 140 122 33 chr5 14704010 14704403 -188381129 - MSTA LTR MaLR 0 428 1 2201 135 0 0 chr5 14705604 14705908 -188379624 + AluSx SINE Alu 1 304 -8 24 77 0 0 chr5 14706700 14706752 -188378780 + AT_rich Low_complexity Low_complexity 1 52 0 32 43 0 0 chr5 14707303 14707349 -188378183 + AT_rich Low_complexity Low_complexity 1 46 0 346 105 64 23 chr5 14707830 14708001 -188377531 + (TA)n Simple_repeat Simple_repeat 2 179 0 256 280 190 10 chr5 14708933 14709033 -188376499 - L2 LINE L2 -6 3266 3149 242 213 33 90 chr5 14710513 14710635 -188374897 - L2 LINE L2 -104 3209 3095 302 238 95 48 chr5 14710658 14710763 -188374769 - L2 LINE L2 -512 2802 2693 1255 257 118 47 chr5 14710991 14711586 -188373946 + MLT1E2 LTR MaLR 1 626 0 591 325 23 52 chr5 14711609 14711914 -188373618 - L2 LINE L2 -829 2485 2190 2295 211 35 7 chr5 14712028 14712482 -188373050 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 14712612 14712634 -188372898 + AT_rich Low_complexity Low_complexity 1 22 0 1299 285 38 77 chr5 14713411 14714224 -188371308 + L2 LINE L2 2186 2957 -315 23 33 0 0 chr5 14714747 14714777 -188370755 + AT_rich Low_complexity Low_complexity 1 30 0 219 233 19 0 chr5 14715602 14715667 -188369865 - MIR SINE MIR -62 146 95 2952 83 5 5 chr5 14716150 14716524 -188369008 + THE1C LTR MaLR 1 374 -1 2020 127 0 20 chr5 14716676 14716976 -188368556 + AluSx SINE Alu 1 294 -18 578 307 109 60 chr5 14769796 14770372 -188315160 + L2 LINE L2 2665 3276 -37 351 0 0 0 chr5 14770400 14770439 -188315093 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 468 289 121 25 chr5 14772474 14772713 -188312819 - L3 LINE CR1 -756 821 560 268 240 62 27 chr5 14773148 14773294 -188312238 + Charlie7 DNA MER1_type 2462 2612 0 212 319 0 0 chr5 14773437 14773506 -188312026 - MIR3 SINE MIR -41 167 99 203 161 0 0 chr5 14773954 14773985 -188311547 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 185 108 27 0 chr5 14774132 14774169 -188311363 + (TA)n Simple_repeat Simple_repeat 1 38 0 306 342 63 13 chr5 14774423 14774581 -188310951 - MIR SINE MIR 0 262 97 23 0 0 0 chr5 14776424 14776447 -188309085 + AT_rich Low_complexity Low_complexity 1 23 0 241 327 40 7 chr5 14777336 14777486 -188308046 + L2 LINE L2 1949 2103 -1211 381 348 148 28 chr5 14777608 14777999 -188307533 + L2 LINE L2 2342 2779 -535 43 64 0 0 chr5 14778010 14778088 -188307444 + AT_rich Low_complexity Low_complexity 1 78 0 1058 165 23 0 chr5 14779024 14779200 -188306332 - AluSg/x SINE Alu -4 308 129 637 290 107 27 chr5 14780253 14780998 -188304534 - L1ME3 LINE L1 -216 5946 5148 1941 129 18 0 chr5 14781110 14781443 -188304089 - AluSx SINE Alu 0 338 1 327 336 47 8 chr5 14781443 14781571 -188303961 - L1ME3 LINE L1 -1130 5016 4884 9245 106 18 4 chr5 14781746 14783161 -188302371 + L1P LINE L1 2762 4195 -1951 302 238 95 48 chr5 14783387 14783492 -188302040 + L2 LINE L2 2693 2802 -512 242 213 33 90 chr5 14783515 14783637 -188301895 + L2 LINE L2 3095 3209 -104 180 323 194 0 chr5 14785117 14785210 -188300322 + L2 LINE L2 3149 3259 -13 344 171 26 26 chr5 14785398 14785474 -188300058 + L1MC1 LINE L1 6244 6319 -14 6373 134 16 36 chr5 14786789 14788020 -188297512 + L1P3 LINE L1 28 1123 -5023 271 203 31 117 chr5 14789588 14789716 -188295816 - MER104 DNA Tc2 -63 117 1 256 321 36 9 chr5 14789717 14789829 -188295703 + HAL1 LINE L1 168 282 -2225 995 273 172 40 chr5 14789914 14790735 -188294797 + HAL1 LINE L1 418 1346 -1161 393 272 221 26 chr5 14791393 14791588 -188293944 + MIR SINE MIR 30 262 0 346 105 64 23 chr5 14792949 14793120 -188292412 + (TA)n Simple_repeat Simple_repeat 2 179 0 32 43 0 0 chr5 14793601 14793647 -188291885 + AT_rich Low_complexity Low_complexity 1 46 0 24 77 0 0 chr5 14794198 14794250 -188291282 + AT_rich Low_complexity Low_complexity 1 52 0 2144 102 0 0 chr5 14794514 14794789 -188290743 + AluSg SINE Alu 4 278 -32 351 44 0 0 chr5 14794791 14794836 -188290696 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 190 243 27 54 chr5 14794857 14794931 -188290601 - MIR SINE MIR -126 136 65 24 32 0 0 chr5 14795278 14795309 -188290223 + AT_rich Low_complexity Low_complexity 1 31 0 216 294 153 0 chr5 14796347 14796432 -188289100 - MIR SINE MIR -109 153 56 190 303 174 58 chr5 14796701 14797011 -188288521 - L3 LINE CR1 -7 1570 1225 384 267 144 28 chr5 14797315 14797495 -188288037 - MIR SINE MIR -13 249 49 273 386 18 6 chr5 14797685 14797848 -188287684 + L3 LINE CR1 995 1159 -418 336 24 0 0 chr5 14798812 14798853 -188286679 + (GA)n Simple_repeat Simple_repeat 2 42 0 396 191 67 0 chr5 14798861 14798950 -188286582 - L1M4 LINE L1 -1202 4944 4850 288 266 0 0 chr5 14799332 14799396 -188286136 + L2 LINE L2 3250 3313 0 180 383 32 0 chr5 14799944 14800038 -188285494 + MIR SINE MIR 76 172 -90 418 165 0 25 chr5 14800137 14800216 -188285316 - THE1B LTR MaLR 0 364 288 601 230 27 0 chr5 14800226 14800374 -188285158 - L1P LINE L1 -3529 2617 2466 2201 135 0 0 chr5 14800943 14801247 -188284285 + AluSx SINE Alu 1 304 -8 270 0 0 0 chr5 14802910 14802940 -188282592 + (CA)n Simple_repeat Simple_repeat 2 31 0 2260 92 7 0 chr5 14803676 14803971 -188281561 - AluY SINE Alu -14 297 1 247 264 27 18 chr5 14805697 14805807 -188279725 + L1MEc LINE L1 36 146 -6250 1396 188 89 0 chr5 14806208 14806512 -188279020 + MER2 DNA MER2_type 8 338 -7 408 160 80 0 chr5 14807715 14807790 -188277742 - L1PA16 LINE L1 -9 6157 6077 258 282 137 55 chr5 14808225 14808679 -188276853 - L1MEd LINE L1 -5321 798 308 2280 166 13 50 chr5 14809612 14809656 -188275876 - L1MC3 LINE L1 -19 7766 7722 2188 112 10 0 chr5 14809656 14809950 -188275582 + AluSp SINE Alu 1 297 -16 2280 166 13 50 chr5 14809950 14810380 -188275152 - L1MC3 LINE L1 -63 7722 7310 243 0 0 0 chr5 14810457 14810484 -188275048 + (TA)n Simple_repeat Simple_repeat 2 28 0 2211 95 3 0 chr5 14810484 14810778 -188274754 - AluY SINE Alu -16 295 1 2056 124 0 23 chr5 14812119 14812418 -188273114 + AluSx SINE Alu 1 292 -20 813 175 8 0 chr5 14814394 14814519 -188271013 + MER1B DNA MER1_type 21 146 -151 376 20 78 0 chr5 14814519 14814570 -188270962 - MLT2A2 LTR ERVL 0 453 399 369 162 0 0 chr5 14814570 14814638 -188270894 + (CA)n Simple_repeat Simple_repeat 1 68 0 203 318 16 0 chr5 14814648 14814711 -188270821 + (CATA)n Simple_repeat Simple_repeat 4 67 0 234 245 0 43 chr5 14814711 14814805 -188270727 + L1MC4 LINE L1 6614 6703 -1339 246 208 0 0 chr5 14814808 14814861 -188270671 + (TA)n Simple_repeat Simple_repeat 1 53 0 2870 108 0 26 chr5 14814861 14815285 -188270247 - MLT2A2 LTR ERVL -40 413 1 722 196 76 71 chr5 14815292 14815476 -188270056 + MER1B DNA MER1_type 155 339 0 1881 135 35 0 chr5 14816896 14817178 -188268354 + AluSc SINE Alu 1 292 -17 337 281 158 14 chr5 14817823 14817962 -188267570 + MIR SINE MIR 35 193 -69 373 385 7 7 chr5 14818756 14818891 -188266641 + MER91A DNA MER1_type 15 149 -47 303 183 42 0 chr5 14819557 14819628 -188265904 + L1MB7 LINE L1 6106 6179 -5 555 307 47 25 chr5 14819798 14820075 -188265457 + L1MEd LINE L1 543 825 -5294 594 82 0 0 chr5 14820158 14820243 -188265289 - AluY SINE Alu -9 302 218 1132 218 87 3 chr5 14820320 14820618 -188264914 + L1ME1 LINE L1 5517 5839 -327 1800 112 7 86 chr5 14820687 14820823 -188264709 + AluSx SINE Alu 1 101 -211 2264 96 3 16 chr5 14820823 14821137 -188264395 + AluSg SINE Alu 1 310 0 1800 112 7 86 chr5 14821137 14821304 -188264228 + AluSx SINE Alu 101 280 -32 192 40 0 0 chr5 14821304 14821329 -188264203 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1902 136 36 7 chr5 14821376 14821678 -188263854 + AluSx SINE Alu 1 311 -1 1044 200 109 115 chr5 14821701 14822271 -188263261 + L1MB5 LINE L1 5599 6166 -8 1540 159 35 0 chr5 14823756 14823988 -188261544 - AluJo SINE Alu -36 276 37 21 36 0 0 chr5 14826813 14826841 -188258691 + AT_rich Low_complexity Low_complexity 1 28 0 1445 203 57 0 chr5 14828946 14829227 -188256305 - AluJb SINE Alu -15 297 1 412 183 61 0 chr5 14829452 14829534 -188255998 - MIR SINE MIR -90 172 86 966 167 19 89 chr5 14830195 14830464 -188255068 - THE1B LTR MaLR 0 364 115 500 271 85 34 chr5 14832190 14832426 -188253106 - MIR SINE MIR -3 259 12 1200 169 111 29 chr5 14833566 14833718 -188251814 - AluJb SINE Alu 0 302 164 2213 121 0 6 chr5 14833718 14834032 -188251500 - AluSq SINE Alu 0 313 2 1200 169 111 29 chr5 14834032 14834158 -188251374 - AluJb SINE Alu -138 164 1 407 215 11 21 chr5 14834739 14834832 -188250700 + LTR7 LTR ERV1 359 450 0 275 365 7 0 chr5 14835118 14835263 -188250269 - HAL1b LINE L1 -829 519 374 807 140 0 0 chr5 14836021 14836192 -188249340 + (CCTG)n Simple_repeat Simple_repeat 2 172 0 299 65 22 0 chr5 14836181 14836227 -188249305 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 * 574 282 55 0 chr5 14836653 14836908 -188248624 + L1ME3A LINE L1 4638 4906 -1240 427 246 42 36 chr5 14837026 14837193 -188248339 + L1ME3A LINE L1 5065 5232 -914 889 282 71 39 chr5 14837247 14837348 -188248184 + L1ME3A LINE L1 5301 5397 -773 2371 114 17 3 chr5 14837348 14837706 -188247826 + THE1B LTR MaLR 1 363 -1 889 282 71 39 chr5 14837706 14838165 -188247367 + L1ME3A LINE L1 5397 5879 -291 355 91 127 0 chr5 14838185 14838240 -188247292 + MADE1 DNA Mariner 1 62 -18 1057 137 11 16 chr5 14839233 14839416 -188246116 - L1MC1 LINE L1 -83 6250 6069 435 193 18 97 chr5 14839463 14839510 -188246022 - L1MC1 LINE L1 -2171 5637 5588 243 79 0 0 chr5 14839510 14839548 -188245984 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1706 119 4 8 chr5 14839548 14839785 -188245747 - AluSg SINE Alu -28 282 47 435 193 18 97 chr5 14839785 14839856 -188245676 - L1MC1 LINE L1 -2218 5590 5533 228 182 0 0 chr5 14840540 14840584 -188244948 + (TG)n Simple_repeat Simple_repeat 1 44 0 971 128 0 0 chr5 14840584 14840782 -188244750 - L1P3 LINE L1 -4677 1469 1272 1061 93 0 0 chr5 14840785 14840924 -188244608 + L1P3 LINE L1 946 1084 -5377 726 244 107 99 chr5 14841911 14842276 -188243256 + MER57B LTR ERV1 67 434 0 1875 140 35 77 chr5 14843148 14843577 -188241955 - L1 LINE L1 -1801 4345 3935 22 35 0 0 chr5 14844182 14844211 -188241321 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 14844616 14844644 -188240888 + AT_rich Low_complexity Low_complexity 1 28 0 1555 254 94 31 chr5 14845395 14846001 -188239531 + HsTC2a DNA Tc2 14 657 -87 240 191 36 12 chr5 14846041 14846125 -188239407 + CT-rich Low_complexity Low_complexity 3 88 0 983 265 71 82 chr5 14846771 14847402 -188238130 - MLT1E3 LTR MaLR 0 624 1 289 353 39 13 chr5 14847762 14847915 -188237617 - L2 LINE L2 0 3272 3116 369 0 0 0 chr5 14847936 14847977 -188237555 + (TG)n Simple_repeat Simple_repeat 1 41 0 1678 165 4 14 chr5 14847981 14848260 -188237272 - AluJb SINE Alu -33 279 4 435 238 111 22 chr5 14848327 14848508 -188237024 + MIR SINE MIR 5 201 -61 350 324 87 27 chr5 14850629 14850814 -188234718 + MIR SINE MIR 51 246 -16 317 326 0 16 chr5 14852300 14852429 -188233103 - L1MEc LINE L1 -4604 1792 1666 514 93 0 23 chr5 14852577 14852663 -188232869 - Alu SINE Alu -3 308 225 2313 257 126 30 chr5 14852665 14853816 -188231716 - L1MEc LINE L1 -4915 1481 220 225 219 87 0 chr5 14854886 14854962 -188230570 + MIR3 SINE MIR 99 159 -49 887 306 84 19 chr5 14855425 14855885 -188229647 + L2 LINE L2 2752 3253 -60 204 385 32 37 chr5 14855917 14856135 -188229397 - MIR SINE MIR -30 232 16 458 312 64 64 chr5 14856175 14856505 -188229027 - L2 LINE L2 -436 2878 2549 353 131 35 35 chr5 14856660 14856805 -188228727 + (TA)n Simple_repeat Simple_repeat 2 146 0 1914 163 0 3 chr5 14857329 14857636 -188227896 - AluJb SINE Alu -6 306 1 208 236 101 22 chr5 14857726 14857815 -188227717 + MIR SINE MIR 112 207 -55 986 170 72 26 chr5 14858421 14858479 -188227053 - L1P LINE L1 -3630 2516 2462 519 60 0 0 chr5 14858479 14858546 -188226986 + (TA)n Simple_repeat Simple_repeat 2 68 0 986 170 72 26 chr5 14858546 14858752 -188226780 - L1P LINE L1 -3684 2462 2240 1611 178 41 46 chr5 14858752 14859118 -188226414 - THE1B LTR MaLR 0 364 1 2457 217 16 9 chr5 14861638 14862187 -188223345 - MER74A LTR ERVL 0 558 6 21 36 0 0 chr5 14862259 14862287 -188223245 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 14862718 14862739 -188222793 + AT_rich Low_complexity Low_complexity 1 21 0 2127 130 0 0 chr5 14862916 14863216 -188222316 - AluSx SINE Alu -12 300 1 555 203 149 31 chr5 14863922 14864144 -188221388 + MER46C DNA MER2_type 86 333 -5 197 274 39 0 chr5 14864764 14864815 -188220717 + L2 LINE L2 3214 3266 -6 1943 147 10 0 chr5 14865435 14865727 -188219805 + AluSx SINE Alu 1 295 -17 505 110 20 20 chr5 14865732 14865832 -188219700 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 347 289 60 27 chr5 14866644 14866793 -188218739 + MIR3 SINE MIR 20 173 -35 318 104 0 0 chr5 14867071 14867119 -188218413 - MADE1 DNA Mariner 0 80 33 500 266 149 0 chr5 14867393 14867581 -188217951 - MIR SINE MIR -43 219 4 453 279 127 23 chr5 14867633 14867950 -188217582 - L1ME3A LINE L1 -338 5832 5479 1781 192 3 3 chr5 14869420 14869728 -188215804 - AluJo SINE Alu -4 308 1 2025 127 0 20 chr5 14870728 14871028 -188214504 - AluSx SINE Alu -18 294 1 2762 83 5 5 chr5 14871180 14871554 -188213978 - THE1C LTR MaLR -1 374 1 216 233 19 0 chr5 14872038 14872103 -188213429 + MIR SINE MIR 95 146 -62 23 33 0 0 chr5 14872928 14872958 -188212574 + AT_rich Low_complexity Low_complexity 1 30 0 1320 294 69 71 chr5 14873300 14874294 -188211238 - L2 LINE L2 -126 3187 2186 22 0 0 0 chr5 14875071 14875093 -188210439 + AT_rich Low_complexity Low_complexity 1 22 0 2088 211 35 7 chr5 14875222 14875676 -188209856 - MLT1C LTR MaLR 0 467 1 402 305 0 58 chr5 14875790 14875964 -188209568 + L2 LINE L2 2190 2353 -961 2076 245 2 27 chr5 14876172 14876301 -188209231 - MER82 DNA MER2_type -140 513 382 2454 49 26 10 chr5 14876301 14876607 -188208925 - AluY SINE Alu 0 311 1 2076 245 2 27 chr5 14876607 14877000 -188208532 - MER82 DNA MER2_type -271 382 4 316 231 185 9 chr5 14877066 14877174 -188208358 - L2 LINE L2 -1 3312 3186 * 350 322 151 5 chr5 14877171 14877269 -188208263 - MIR SINE MIR -10 252 170 208 50 0 50 chr5 14877269 14877309 -188208223 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 350 322 151 5 chr5 14877309 14877409 -188208123 - MIR SINE MIR -92 170 25 921 251 0 0 chr5 14877414 14877617 -188207915 - MLT1A1 LTR MaLR -7 358 156 1822 123 4 14 chr5 14877944 14878221 -188207311 + AluSq SINE Alu 28 301 -12 1218 203 66 11 chr5 14878920 14879191 -188206341 - AluJo SINE Alu -16 296 11 28 48 0 0 chr5 14879212 14879254 -188206278 + AT_rich Low_complexity Low_complexity 1 42 0 2322 78 0 3 chr5 14879396 14879733 -188205799 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 14879974 14879995 -188205537 + AT_rich Low_complexity Low_complexity 1 21 0 2501 18 0 11 chr5 14880050 14880333 -188205199 - AluYb8 SINE Alu 0 318 39 190 303 66 13 chr5 14881511 14881587 -188203945 - MIR SINE MIR -71 191 112 5038 146 15 22 chr5 14881793 14883030 -188202502 + L1PA13 LINE L1 4911 6142 -21 1478 179 0 46 chr5 14884359 14884661 -188200871 + AluJo SINE Alu 32 312 0 423 301 29 0 chr5 14885604 14885740 -188199792 + MIR SINE MIR 97 236 -26 1873 149 3 37 chr5 14885898 14886219 -188199313 + AluJb SINE Alu 1 310 -2 2480 71 3 3 chr5 14889575 14889885 -188195647 + AluY SINE Alu 1 310 -1 265 260 39 0 chr5 14890020 14890097 -188195435 - MIR3 SINE MIR -11 197 118 318 339 110 44 chr5 14892683 14893434 -188192098 + L2 LINE L2 1935 2780 -492 686 158 24 134 chr5 14893434 14893680 -188191852 - MER20 DNA MER1_type 0 219 1 318 339 110 44 chr5 14893680 14893997 -188191535 + L2 LINE L2 2780 3075 -197 235 276 17 0 chr5 14894627 14894685 -188190847 + L2 LINE L2 3210 3268 -4 251 288 42 8 chr5 14894789 14894907 -188190625 + MLT1K LTR MaLR 138 259 -329 312 326 16 16 chr5 14896003 14896132 -188189400 + L3 LINE CR1 326 454 -1123 2137 128 75 9 chr5 14896560 14897013 -188188519 - MER1A DNA MER1_type -4 525 1 267 269 183 32 chr5 14897017 14897203 -188188329 + L3 LINE CR1 672 885 -692 457 341 5 28 chr5 14897232 14897497 -188188035 - MIR SINE MIR 0 262 2 222 329 26 0 chr5 14897552 14897628 -188187904 + L3 LINE CR1 958 1035 -542 440 313 106 17 chr5 14897845 14898024 -188187508 + L3 LINE CR1 1371 1565 -12 243 0 0 0 chr5 14898186 14898213 -188187319 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1071 164 6 0 chr5 14898589 14898760 -188186772 - FRAM SINE Alu -4 172 1 397 240 46 139 chr5 14899474 14899612 -188185920 - L1M4 LINE L1 -791 5355 5206 2233 92 0 7 chr5 14899612 14899894 -188185638 + AluSq SINE Alu 17 296 -17 397 240 46 139 chr5 14899894 14900143 -188185389 - L1M4 LINE L1 -940 5206 5004 2232 232 41 41 chr5 14900353 14902278 -188183254 + L1M4b LINE L1 151 2160 -4799 1893 169 0 0 chr5 14902424 14902720 -188182812 + AluSg SINE Alu 1 296 -14 349 315 121 58 chr5 14903589 14904128 -188181404 - L2 LINE L2 -1122 2192 1620 2053 136 7 0 chr5 14906538 14906839 -188178693 + AluSx SINE Alu 1 303 -9 696 258 95 28 chr5 14907173 14907456 -188178076 + LTR16A LTR ERVL 56 357 -93 217 318 61 0 chr5 14907736 14907802 -188177730 - L2 LINE L2 -22 3291 3222 409 263 44 18 chr5 14908953 14909067 -188176465 - MER5A DNA MER1_type -65 124 8 1846 137 43 13 chr5 14909528 14909828 -188175704 + AluSq SINE Alu 2 310 -3 2111 108 14 3 chr5 14910103 14910400 -188175132 + AluSq SINE Alu 1 300 -13 410 273 62 0 chr5 14911114 14911242 -188174290 + MIR SINE MIR 124 259 -3 1590 175 23 10 chr5 14911245 14911553 -188173979 - AluJo SINE Alu 0 312 1 3857 86 0 0 chr5 14911563 14912073 -188173459 + L1PB1 LINE L1 5641 6150 -1 514 250 31 66 chr5 14912124 14912320 -188173212 + MER5A DNA MER1_type 1 189 0 2265 96 0 19 chr5 14914941 14915253 -188170279 + AluSx SINE Alu 1 306 -6 1713 136 27 0 chr5 14915703 14915961 -188169571 - AluSx SINE Alu -9 303 39 262 231 179 43 chr5 14916005 14916122 -188169410 + MIR SINE MIR 130 262 0 513 279 18 18 chr5 14916315 14916480 -188169052 + MER5B DNA MER1_type 14 178 0 566 209 41 102 chr5 14917001 14917245 -188168287 - MER106A DNA MER1_type -5 231 3 261 0 0 0 chr5 14919085 14919114 -188166418 + (TG)n Simple_repeat Simple_repeat 2 30 0 510 251 29 6 chr5 14919636 14919807 -188165725 - MER96B DNA MER1_type? -241 176 2 1142 158 49 0 chr5 14919853 14920037 -188165495 + AluJb SINE Alu 86 278 -34 519 135 0 0 chr5 14920037 14920133 -188165399 + (GA)n Simple_repeat Simple_repeat 1 96 0 824 303 101 51 chr5 14920858 14921927 -188163605 - L2 LINE L2 0 3313 2197 559 294 105 79 chr5 14923365 14923784 -188161748 + L1MC/D LINE L1 4181 4587 -1657 270 0 0 0 chr5 14923784 14923814 -188161718 + (TG)n Simple_repeat Simple_repeat 1 30 0 559 294 105 79 chr5 14923814 14924655 -188160877 + L1MC/D LINE L1 4587 5478 -766 406 266 32 19 chr5 14924961 14925115 -188160417 + GA-rich Low_complexity Low_complexity 4 159 0 23 33 0 0 chr5 14925255 14925285 -188160247 + AT_rich Low_complexity Low_complexity 1 30 0 1376 201 137 0 chr5 14926009 14926367 -188159165 - MER63B DNA MER1_type -29 407 1 299 308 35 21 chr5 14927034 14927177 -188158355 - L1ME1 LINE L1 -50 6116 5972 1650 214 58 8 chr5 14927486 14927974 -188157558 - L1MD1 LINE L1 -397 5769 5316 22 56 0 0 chr5 14928367 14928403 -188157129 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 14928936 14928972 -188156560 + AT_rich Low_complexity Low_complexity 1 36 0 195 167 0 0 chr5 14929212 14929254 -188156278 + (CA)n Simple_repeat Simple_repeat 2 43 0 950 194 0 11 chr5 14929439 14929614 -188155918 + AluJb SINE Alu 137 309 -3 736 241 25 63 chr5 14929933 14930170 -188155362 - MIR SINE MIR -21 241 14 208 318 0 16 chr5 14930977 14931103 -188154429 + (TA)n Simple_repeat Simple_repeat 1 124 0 348 24 0 0 chr5 14931103 14931144 -188154388 + (TG)n Simple_repeat Simple_repeat 2 42 0 236 284 0 16 chr5 14931224 14931351 -188154181 + (TA)n Simple_repeat Simple_repeat 1 125 0 1659 143 42 4 chr5 14931386 14931645 -188153887 + AluSx SINE Alu 1 269 -43 474 136 0 0 chr5 14931645 14931711 -188153821 + Alu SINE Alu 219 284 -26 21 71 0 0 chr5 14932528 14932570 -188152962 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr5 14933218 14933256 -188152276 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 14934119 14934149 -188151383 + AT_rich Low_complexity Low_complexity 1 30 0 248 242 114 47 chr5 14936151 14936300 -188149232 - L2 LINE L2 -231 3082 2924 28 0 0 0 chr5 14940020 14940048 -188145484 + AT_rich Low_complexity Low_complexity 1 28 0 247 288 27 14 chr5 14940105 14940178 -188145354 - MIR3 SINE MIR -29 179 106 1811 153 0 4 chr5 14940878 14941152 -188144380 - AluSx SINE Alu -39 273 1 927 215 9 36 chr5 14941328 14941551 -188143981 + MER20 DNA MER1_type 3 219 0 453 248 222 7 chr5 14941561 14941714 -188143818 + MER5A DNA MER1_type 4 189 0 225 234 0 0 chr5 14943721 14943785 -188141747 + (TA)n Simple_repeat Simple_repeat 2 65 0 187 225 28 14 chr5 14943955 14944026 -188141506 + (CATATA)n Simple_repeat Simple_repeat 2 73 0 521 224 11 28 chr5 14944052 14944231 -188141301 + (CATATA)n Simple_repeat Simple_repeat 3 178 0 240 167 0 61 chr5 14944263 14944329 -188141203 - LTR66 LTR ERVL -172 438 377 884 306 92 34 chr5 14944590 14945058 -188140474 - L2 LINE L2 -4 3309 2815 1084 243 85 47 chr5 14945108 14945668 -188139864 + MER97c DNA MER1_type? 40 723 -367 3365 30 0 2 chr5 14945668 14946070 -188139462 - L1PA4 LINE L1 -3 6152 5752 1084 243 85 47 chr5 14946070 14946453 -188139079 + MER97c DNA MER1_type? 723 1090 0 2259 108 0 0 chr5 14946824 14947121 -188138411 + AluY SINE Alu 2 298 -13 1672 185 0 20 chr5 14947401 14947698 -188137834 - AluJo SINE Alu -21 291 1 22 35 0 0 chr5 14948278 14948307 -188137225 + AT_rich Low_complexity Low_complexity 1 29 0 239 172 0 17 chr5 14948480 14948538 -188136994 + CT-rich Low_complexity Low_complexity 3 59 0 480 315 38 46 chr5 14948630 14948868 -188136664 - MIR SINE MIR -10 252 17 227 283 104 0 chr5 14948920 14949026 -188136506 - L1ME LINE L1 -455 5666 5550 222 293 79 43 chr5 14950504 14950668 -188134864 + L2 LINE L2 3119 3288 -25 21 0 0 0 chr5 14950970 14950991 -188134541 + AT_rich Low_complexity Low_complexity 1 21 0 333 283 133 0 chr5 14951136 14951256 -188134276 + MIR SINE MIR 7 142 -120 2226 124 3 0 chr5 14951740 14952046 -188133486 - AluSg SINE Alu -3 307 1 486 291 23 102 chr5 14952207 14952472 -188133060 - MIR SINE MIR -4 258 15 2139 141 120 5 chr5 14952473 14952857 -188132675 + MSTA LTR MaLR 1 428 0 8928 179 19 12 chr5 14952857 14954496 -188131036 + MSTA-int LTR MaLR 1 1651 0 1986 171 119 10 chr5 14954496 14954882 -188130650 + MSTA LTR MaLR 1 428 0 2766 172 72 27 chr5 14955078 14955502 -188130030 - L1MA9 LINE L1 -67 6245 5781 396 0 0 0 chr5 14955502 14955546 -188129986 + (TG)n Simple_repeat Simple_repeat 2 45 0 2766 172 72 27 chr5 14955546 14955760 -188129772 - L1MA9 LINE L1 -531 5781 5578 359 248 66 22 chr5 14956344 14956481 -188129051 - L1ME4a LINE L1 -156 5965 5823 1336 226 27 6 chr5 14956626 14956954 -188128578 - MER58B DNA MER1_type -5 336 2 333 230 90 50 chr5 14957862 14957962 -188127570 - L2 LINE L2 0 3272 3169 496 301 87 18 chr5 14958073 14958292 -188127240 - MIR SINE MIR -21 241 8 207 281 16 16 chr5 14958341 14958405 -188127127 - L2 LINE L2 -253 3060 2997 337 264 221 24 chr5 14958493 14958701 -188126831 - L2 LINE L2 -503 2811 2563 2342 91 0 0 chr5 14958833 14959131 -188126401 - AluSg SINE Alu -12 298 1 29 78 0 0 chr5 14959392 14959456 -188126076 + AT_rich Low_complexity Low_complexity 1 64 0 218 31 0 31 chr5 14959554 14959586 -188125946 + (TA)n Simple_repeat Simple_repeat 2 32 0 1722 164 10 16 chr5 14960651 14960961 -188124571 + AluSx SINE Alu 1 308 -4 22 70 0 0 chr5 14962294 14962337 -188123195 + AT_rich Low_complexity Low_complexity 1 43 0 318 231 13 0 chr5 14962380 14962458 -188123074 - MLT1I LTR MaLR -2 407 329 268 340 40 10 chr5 14964117 14964217 -188121315 - L2 LINE L2 -16 3256 3154 312 328 84 0 chr5 14966082 14966213 -188119319 + L1ME4a LINE L1 5884 6025 -96 1423 246 35 71 chr5 14966425 14966945 -188118587 + MLT1E LTR MaLR 47 547 -46 887 282 60 0 chr5 14967087 14967420 -188118112 - L1ME1 LINE L1 -5 6161 5809 2461 53 3 3 chr5 14967463 14967763 -188117769 + AluY SINE Alu 1 300 -11 1035 174 0 0 chr5 14968710 14968871 -188116661 - AluJb SINE Alu -17 295 135 23 54 0 0 chr5 14968937 14968974 -188116558 + AT_rich Low_complexity Low_complexity 1 37 0 884 200 85 0 chr5 14969418 14969653 -188115879 - L1ME1 LINE L1 -90 6076 5822 24 0 0 0 chr5 14970662 14970686 -188114846 + AT_rich Low_complexity Low_complexity 1 24 0 2228 107 7 7 chr5 14970919 14971228 -188114304 + AluSc SINE Alu 1 309 0 2103 110 34 3 chr5 14971724 14972015 -188113517 - AluSx SINE Alu -12 300 1 21 0 0 0 chr5 14972035 14972056 -188113476 + AT_rich Low_complexity Low_complexity 1 21 0 507 257 72 0 chr5 14972191 14972343 -188113189 - MIR SINE MIR 0 262 100 417 340 70 0 chr5 14972434 14972619 -188112913 + MIR SINE MIR 65 262 0 27 62 0 0 chr5 14973191 14973239 -188112293 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr5 14973310 14973331 -188112201 + AT_rich Low_complexity Low_complexity 1 21 0 2252 114 0 16 chr5 14973956 14974264 -188111268 + AluSg SINE Alu 1 303 -7 255 332 70 2 chr5 14975106 14975277 -188110255 + MIR SINE MIR 5 185 -62 2391 73 0 22 chr5 14975282 14975595 -188109937 + AluY SINE Alu 1 306 -5 296 365 24 8 chr5 14975886 14976012 -188109520 - L3 LINE CR1 -1084 493 366 24 32 0 0 chr5 14976948 14976979 -188108553 + AT_rich Low_complexity Low_complexity 1 31 0 1022 167 0 0 chr5 14977317 14977518 -188108014 - AluSg/x SINE Alu 0 327 127 2175 121 3 3 chr5 14977519 14977826 -188107706 - AluSx SINE Alu -5 307 1 2255 120 25 33 chr5 14977910 14977950 -188107582 - THE1B LTR MaLR 0 364 325 2025 114 13 17 chr5 14977950 14978249 -188107283 + AluSx SINE Alu 1 298 -14 2255 120 25 33 chr5 14978249 14978575 -188106957 - THE1B LTR MaLR -39 325 1 184 341 83 15 chr5 14979735 14979863 -188105669 - MIR SINE MIR -55 153 20 283 342 171 0 chr5 14980334 14980486 -188105046 - L3 LINE CR1 -9 1568 1391 408 40 0 0 chr5 14980486 14980536 -188104996 + (CA)n Simple_repeat Simple_repeat 2 51 0 180 320 59 110 chr5 14981067 14981286 -188104246 - L3 LINE CR1 -218 1359 1152 30 27 0 0 chr5 14981352 14981389 -188104143 + AT_rich Low_complexity Low_complexity 1 37 0 696 266 80 11 chr5 14981458 14981863 -188103669 + L1PB4 LINE L1 5447 5884 -272 * 1912 185 15 10 chr5 14981552 14981963 -188103569 + L1MB8 LINE L1 5573 5985 -193 466 284 28 14 chr5 14982134 14982469 -188103063 - MLT1G1 LTR MaLR 0 588 217 2490 119 5 13 chr5 14983138 14983516 -188102016 - THE1C LTR MaLR 0 375 1 211 375 10 0 chr5 14984287 14984391 -188101141 - L2 LINE L2 -2 3311 3207 181 266 137 73 chr5 14985724 14985848 -188099684 - L2 LINE L2 -3 3269 3138 330 272 22 66 chr5 14986189 14986325 -188099207 + MIR SINE MIR 1 130 -132 2281 169 85 6 chr5 14986328 14986871 -188098661 - L1MB4 LINE L1 0 6180 5595 388 260 20 10 chr5 14986871 14986971 -188098561 + MIR SINE MIR 115 215 -47 2323 162 82 29 chr5 14987127 14987375 -188098157 - MER6A DNA MER2_type -260 605 372 2006 151 10 0 chr5 14987375 14987674 -188097858 + AluSx SINE Alu 1 302 -10 2323 162 82 29 chr5 14987674 14987937 -188097595 - MER6A DNA MER2_type -493 372 67 207 293 293 7 chr5 14991158 14991308 -188094224 - MIR3 SINE MIR -6 202 10 180 333 0 0 chr5 14991895 14991946 -188093586 - L2 LINE L2 -7 3265 3215 417 249 16 124 chr5 14992050 14992243 -188093289 - MIR SINE MIR -1 261 90 2304 107 0 25 chr5 14993400 14993719 -188091813 - AluSq SINE Alu -2 311 1 204 67 0 0 chr5 14993800 14993830 -188091702 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 557 343 166 14 chr5 14993988 14994344 -188091188 - L2 LINE L2 -1148 2166 1757 213 384 88 8 chr5 14994364 14994489 -188091043 + MIR SINE MIR 13 147 -115 189 0 0 0 chr5 14994546 14994567 -188090965 + (TG)n Simple_repeat Simple_repeat 2 22 0 3715 99 59 49 chr5 14994730 14995445 -188090087 - Tigger3(Golem) DNA MER2_type -31 2998 2277 611 187 0 4 chr5 14995434 14995547 -188089985 - Tigger3(Golem) DNA MER2_type -2954 75 1 * 728 169 7 0 chr5 14995547 14995689 -188089843 - L1MA9 LINE L1 -272 6040 5898 478 169 0 0 chr5 14995692 14995775 -188089757 + L1MA9 LINE L1 6057 6139 -173 32 0 0 0 chr5 14995785 14995817 -188089715 + AT_rich Low_complexity Low_complexity 1 32 0 1534 69 0 5 chr5 14995817 14996021 -188089511 - L1PA8 LINE L1 -3 6169 5967 788 149 65 0 chr5 14996021 14996170 -188089362 + L1MA9 LINE L1 6143 6306 -6 1879 238 60 21 chr5 14996689 14997253 -188088279 - L1M4 LINE L1 -1405 4741 4147 243 0 0 0 chr5 14997253 14997280 -188088252 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1879 238 60 21 chr5 14997280 14997366 -188088166 - L1M4 LINE L1 -1999 4147 4066 1374 176 8 31 chr5 14997502 14997763 -188087769 - AluJo SINE Alu -21 291 37 942 147 21 0 chr5 14998663 14998806 -188086726 + AluSg/x SINE Alu 147 292 -20 214 149 21 21 chr5 14999328 14999375 -188086157 + (TA)n Simple_repeat Simple_repeat 1 47 0 1219 162 8 34 chr5 14999404 14999638 -188085894 - AluJo SINE Alu -2 310 83 24 0 0 0 chr5 14999651 14999675 -188085857 + AT_rich Low_complexity Low_complexity 1 24 0 793 216 6 23 chr5 15001341 15001512 -188084020 - MER45A DNA AcHobo -2 176 9 26 0 0 0 chr5 15001979 15002005 -188083527 + AT_rich Low_complexity Low_complexity 1 26 0 252 229 85 102 chr5 15002095 15002213 -188083319 + MIR SINE MIR 22 137 -71 2152 113 3 3 chr5 15002671 15002964 -188082568 - AluSx SINE Alu -16 296 4 245 318 24 12 chr5 15003237 15003322 -188082210 - MER5A DNA MER1_type -92 97 12 1604 160 7 41 chr5 15003383 15003677 -188081855 + AluJo SINE Alu 10 293 -19 212 330 52 31 chr5 15003838 15003935 -188081597 + L3b LINE CR1 1481 1579 -4 2177 119 3 0 chr5 15004689 15004984 -188080548 - AluSx SINE Alu -16 296 1 222 318 82 0 chr5 15006496 15006581 -188078951 - L2 LINE L2 -679 2635 2544 619 276 56 12 chr5 15006933 15007183 -188078349 - L1MA9 LINE L1 -37 6275 6015 333 369 43 0 chr5 15007277 15007418 -188078114 - MIR SINE MIR -110 152 6 246 62 0 0 chr5 15009329 15009361 -188076171 + (CAG)n Simple_repeat Simple_repeat 1 32 0 605 276 74 10 chr5 15010833 15011036 -188074496 - L2 LINE L2 -3037 277 62 29 47 0 0 chr5 15011074 15011117 -188074415 + AT_rich Low_complexity Low_complexity 1 43 0 251 313 61 10 chr5 15011257 15011356 -188074176 + L2 LINE L2 3191 3294 -19 1218 197 40 34 chr5 15011359 15011556 -188073976 - MLT1A1 LTR MaLR -4 361 160 2269 88 3 61 chr5 15011556 15011885 -188073647 - AluY SINE Alu -1 310 1 1218 197 40 34 chr5 15011885 15012037 -188073495 - MLT1A1 LTR MaLR -205 160 10 192 250 68 0 chr5 15013312 15013356 -188072176 - L2 LINE L2 -16 3256 3210 394 281 62 8 chr5 15013641 15013883 -188071649 + L1MC5 LINE L1 7337 7591 -370 334 296 101 11 chr5 15013984 15014163 -188071369 + L1MC5 LINE L1 7703 7897 -64 234 0 0 0 chr5 15064820 15064846 -188020686 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 218 318 0 0 chr5 15064896 15064959 -188020573 - MIR SINE MIR -162 100 38 223 245 128 43 chr5 15065203 15065297 -188020235 + MIR3 SINE MIR 10 111 -97 270 162 147 0 chr5 15065674 15065742 -188019790 + L1M LINE L1 5284 5361 -813 2176 155 51 0 chr5 15065742 15066096 -188019436 + MSTC LTR MaLR 1 372 -56 226 247 45 11 chr5 15066196 15066285 -188019247 + L1MC1 LINE L1 4296 4387 -1759 2514 184 80 11 chr5 15066295 15066819 -188018713 + L1MC1 LINE L1 5550 6115 -218 618 191 0 8 chr5 15066819 15066950 -188018582 + L1MB7 LINE L1 6055 6184 0 2514 184 80 11 chr5 15066950 15066978 -188018554 + L1MC1 LINE L1 6115 6140 -193 378 298 144 49 chr5 15068608 15068744 -188016788 - HAL1b LINE L1 -33 1315 1193 474 120 0 0 chr5 15068744 15068819 -188016713 + (TA)n Simple_repeat Simple_repeat 2 76 0 378 298 144 49 chr5 15068819 15069168 -188016364 - HAL1b LINE L1 -155 1193 784 187 219 47 31 chr5 15069168 15069232 -188016300 + MIR SINE MIR 191 255 -7 245 247 35 0 chr5 15069262 15069347 -188016185 - HAL1b LINE L1 -557 791 704 1655 176 22 25 chr5 15069348 15069705 -188015827 + MLT1A1 LTR MaLR 4 359 -6 2210 106 25 6 chr5 15070354 15070712 -188014820 - L1PA7 LINE L1 -867 5279 4915 6547 57 37 2 chr5 15070714 15071580 -188013952 + L1PA7 LINE L1 5258 6153 -1 530 282 0 0 chr5 15072037 15072161 -188013371 - MIR SINE MIR -42 220 97 1139 236 82 20 chr5 15072229 15072581 -188012951 - MLT1A2 LTR MaLR 0 374 1 873 222 44 0 chr5 15073114 15073317 -188012215 - MER20 DNA MER1_type -7 212 1 2638 187 24 2 chr5 15073738 15074272 -188011260 - L1MB4 LINE L1 -1 6179 5634 22 0 0 0 chr5 15074940 15074962 -188010570 + AT_rich Low_complexity Low_complexity 1 22 0 348 62 10 0 chr5 15075561 15075613 -188009919 - Alu SINE Alu -7 295 251 3814 219 15 25 chr5 15075614 15076601 -188008931 - L1P LINE L1 -822 5324 4347 6823 59 14 1 chr5 15076601 15077771 -188007761 + L1PA7 LINE L1 4952 6139 -15 3814 219 15 25 chr5 15077771 15077851 -188007681 - L1P LINE L1 -1799 4347 4268 663 158 0 0 chr5 15077892 15078006 -188007526 - L1MA2 LINE L1 0 6304 6191 2333 62 3 3 chr5 15079011 15079299 -188006233 + AluY SINE Alu 1 288 -23 211 229 66 0 chr5 15079369 15079430 -188006102 - MIR SINE MIR -49 213 149 266 293 0 27 chr5 15080173 15080248 -188005284 + L2 LINE L2 3145 3217 -55 1359 259 91 77 chr5 15081560 15082210 -188003322 + L2 LINE L2 2247 2905 -409 303 28 0 0 chr5 15082530 15082566 -188002966 + (CA)n Simple_repeat Simple_repeat 2 37 0 319 248 131 27 chr5 15082567 15082966 -188002566 + L1MC5 LINE L1 4151 7513 -448 1905 157 64 6 chr5 15083284 15083628 -188001904 + THE1B LTR MaLR 1 364 0 10513 99 33 29 chr5 15083628 15085202 -188000330 + THE1B-int LTR MaLR 1 1580 0 2165 111 38 54 chr5 15085202 15085572 -187999960 + THE1B LTR MaLR 1 364 0 642 282 80 50 chr5 15085643 15086220 -187999312 + L1MC/D LINE L1 4892 5480 -802 641 215 12 0 chr5 15086321 15086484 -187999048 + GA-rich Low_complexity Low_complexity 3 167 0 2112 128 0 0 chr5 15086521 15086809 -187998723 + AluSx SINE Alu 1 288 -24 396 331 126 53 chr5 15086919 15087182 -187998350 + L2 LINE L2 2874 3155 -158 581 260 18 40 chr5 15089706 15089929 -187995603 - MER20 DNA MER1_type 0 219 2 2323 101 3 3 chr5 15089981 15090289 -187995243 - AluSp SINE Alu 0 313 6 1448 209 34 90 chr5 15090677 15091130 -187994402 + MLT1D LTR MaLR 1 421 -84 1796 188 0 0 chr5 15091130 15091417 -187994115 + AluJo SINE Alu 4 290 -22 1448 209 34 90 chr5 15091417 15091498 -187994034 + MLT1D LTR MaLR 421 505 0 186 264 75 0 chr5 15091706 15091759 -187993773 + L2 LINE L2 3201 3257 -15 194 348 130 0 chr5 15093108 15093200 -187992332 + MIR SINE MIR 47 150 -112 2233 117 0 0 chr5 15093406 15093704 -187991828 - AluSg SINE Alu -12 298 1 28 61 0 0 chr5 15093822 15093871 -187991661 + AT_rich Low_complexity Low_complexity 1 49 0 883 213 51 121 chr5 15094055 15094259 -187991273 + Charlie4a DNA MER1_type 72 289 -1672 1551 123 111 0 chr5 15094259 15094502 -187991030 - AluSx SINE Alu -37 275 6 883 213 51 121 chr5 15094502 15094767 -187990765 + Charlie4a DNA MER1_type 289 508 0 391 238 24 0 chr5 15094825 15094909 -187990623 + MER5A DNA MER1_type 27 112 -77 26 0 0 0 chr5 15094961 15094987 -187990545 + AT_rich Low_complexity Low_complexity 1 26 0 2065 110 33 0 chr5 15095787 15096088 -187989444 - AluSq SINE Alu -2 311 1 4957 125 11 16 chr5 15096236 15097060 -187988472 - L1PA16 LINE L1 -5 6161 5342 1887 220 18 0 chr5 15097060 15097505 -187988027 + L1 LINE L1 3808 4260 -1886 * 2725 103 20 11 chr5 15097493 15097940 -187987592 + L1MA2 LINE L1 5806 6256 -48 2273 193 53 12 chr5 15099107 15099620 -187985912 - MER44D DNA MER2_type -16 589 1 1277 202 73 48 chr5 15100255 15100612 -187984920 + MLT1A2 LTR MaLR 5 370 -4 355 233 18 12 chr5 15101006 15101169 -187984363 + GA-rich Low_complexity Low_complexity 3 166 0 26 30 0 0 chr5 15101621 15101654 -187983878 + AT_rich Low_complexity Low_complexity 1 33 0 418 297 114 20 chr5 15102044 15102246 -187983286 - L1M4 LINE L1 -3025 3121 2901 228 67 0 0 chr5 15102526 15102556 -187982976 + (CAT)n Simple_repeat Simple_repeat 1 30 0 217 171 0 0 chr5 15104668 15104703 -187980829 - L3 LINE CR1 -978 599 565 1595 149 0 8 chr5 15104939 15105181 -187980351 + AluJo SINE Alu 64 303 -9 1740 162 23 44 chr5 15105457 15105845 -187979687 - MLT1B LTR MaLR -4 386 7 908 303 141 53 chr5 15105954 15106568 -187978964 - L2 LINE L2 0 3313 2644 1993 142 39 31 chr5 15106628 15106988 -187978544 + THE1B LTR MaLR 1 363 -1 572 115 50 86 chr5 15108170 15108309 -187977223 + MLT1B LTR MaLR 1 134 -256 712 113 75 23 chr5 15108330 15108463 -187977069 + THE1C LTR MaLR 3 142 -233 984 70 5 153 chr5 15108466 15108681 -187976851 + THE1C-int LTR MaLR 1398 1580 0 1710 150 102 40 chr5 15108681 15109034 -187976498 + THE1C LTR MaLR 1 375 0 1170 134 101 0 chr5 15109036 15109253 -187976279 + MLT1B LTR MaLR 152 390 0 327 25 0 0 chr5 15109262 15109302 -187976230 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 0 0 0 chr5 15109462 15109485 -187976047 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 385 293 29 98 chr5 15110033 15110072 -187975460 - L1M4 LINE L1 -1851 4295 4255 2313 97 0 0 chr5 15110072 15110370 -187975162 + AluSx SINE Alu 1 298 -14 385 293 29 98 chr5 15110370 15110576 -187974956 - L1M4 LINE L1 -1891 4255 4067 226 206 68 0 chr5 15111866 15111939 -187973593 + L1ME1 LINE L1 6089 6166 0 332 140 0 0 chr5 15112079 15112129 -187973403 + LTR29 LTR ERV1 3 52 -570 296 310 41 0 chr5 15113410 15113555 -187971977 + L1M4 LINE L1 2699 2849 -3297 24 53 0 0 chr5 15113687 15113725 -187971807 + AT_rich Low_complexity Low_complexity 1 38 0 2067 134 0 0 chr5 15114003 15114328 -187971204 + AluSx SINE Alu 1 325 0 1579 168 50 92 chr5 15114550 15114680 -187970852 + MLT1B LTR MaLR 1 135 -255 2456 93 3 0 chr5 15114680 15114991 -187970541 + AluSx SINE Alu 1 312 0 1579 168 50 92 chr5 15114991 15115264 -187970268 + MLT1B LTR MaLR 135 387 -3 1194 260 140 22 chr5 15115548 15116697 -187968835 + L1MDa LINE L1 1687 2982 -3558 1037 225 42 123 chr5 15116755 15117076 -187968456 + MLT1F1 LTR MaLR 69 414 -153 428 0 19 0 chr5 15117076 15117128 -187968404 + (CA)n Simple_repeat Simple_repeat 1 53 0 1037 225 42 123 chr5 15117128 15117281 -187968251 + MLT1F1 LTR MaLR 414 496 -71 2139 135 0 0 chr5 15117281 15117585 -187967947 - AluSx SINE Alu -8 304 1 1037 225 42 123 chr5 15117585 15117652 -187967880 + MLT1F1 LTR MaLR 496 567 0 30 0 0 0 chr5 15117691 15117721 -187967811 + AT_rich Low_complexity Low_complexity 1 30 0 218 56 28 0 chr5 15117801 15117837 -187967695 + (TA)n Simple_repeat Simple_repeat 1 37 0 851 283 85 34 chr5 15117841 15118513 -187967019 + L1MDa LINE L1 3873 4578 -1962 2074 198 46 32 chr5 15118515 15119011 -187966521 + MLT1D LTR MaLR 3 505 0 1071 269 55 16 chr5 15119101 15119611 -187965921 + L1MDa LINE L1 4715 5244 -1296 362 265 73 60 chr5 15119646 15119880 -187965652 - Charlie2 DNA MER1_type -2516 266 30 2066 185 19 19 chr5 15120581 15120992 -187964540 + LTR57 LTR ERVL 1 411 0 401 330 144 3 chr5 15121186 15121471 -187964061 + L3 LINE CR1 560 884 -693 1314 304 95 13 chr5 15122188 15122891 -187962641 + MER69B DNA AcHobo 114 874 -352 595 199 121 48 chr5 15122891 15123057 -187962475 + MER20 DNA MER1_type 2 179 -40 1188 8 0 0 chr5 15123057 15123190 -187962342 + AluYb8 SINE Alu 184 316 -2 303 100 0 0 chr5 15123190 15123230 -187962302 + MER20 DNA MER1_type 172 211 -8 818 213 158 26 chr5 15123235 15123545 -187961987 + MER69B DNA AcHobo 863 1213 -13 712 261 132 69 chr5 15123583 15124062 -187961470 - MLT1H LTR MaLR 0 549 41 245 206 29 0 chr5 15124134 15124202 -187961330 - L1MEd LINE L1 -4992 1127 1058 1565 137 391 44 chr5 15124202 15124632 -187960900 - LTR18B LTR ERVL -13 601 23 612 294 64 47 chr5 15124648 15125114 -187960418 - L1MEd LINE L1 -5074 1045 572 2241 130 28 0 chr5 15125313 15125667 -187959865 - THE1B LTR MaLR 0 364 1 344 276 135 21 chr5 15125730 15125922 -187959610 - L1MEd LINE L1 -5904 215 2 25 0 0 0 chr5 15126559 15126584 -187958948 + AT_rich Low_complexity Low_complexity 1 25 0 1394 175 56 28 chr5 15126922 15127208 -187958324 - AluJo SINE Alu -8 294 1 195 69 0 0 chr5 15128233 15128262 -187957270 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 267 305 136 0 chr5 15128269 15128387 -187957145 - L2 LINE L2 0 3313 3180 598 298 41 25 chr5 15128420 15128736 -187956796 - L1MC/D LINE L1 -2162 5646 5326 1723 223 113 18 chr5 15128754 15129320 -187956212 - L1MC4a LINE L1 -114 7694 7075 285 361 19 7 chr5 15130350 15130505 -187955027 + MLT1I LTR MaLR 253 409 0 339 235 12 0 chr5 15130523 15130608 -187954924 - L1P5 LINE L1 -471 5680 5595 477 264 8 0 chr5 15130749 15130874 -187954658 - Charlie1 DNA MER1_type -7 2754 2629 242 179 0 75 chr5 15131497 15131564 -187953968 + CT-rich Low_complexity Low_complexity 3 64 0 202 143 16 48 chr5 15133745 15133808 -187951724 + (TA)n Simple_repeat Simple_repeat 2 62 0 193 93 0 47 chr5 15133945 15133988 -187951544 + (TA)n Simple_repeat Simple_repeat 1 41 0 2550 190 141 136 chr5 15135281 15135863 -187949669 - L1MD3 LINE L1 -7 7988 7411 502 220 17 8 chr5 15135863 15135981 -187949551 - MLT1F1 LTR MaLR -448 119 1 2550 190 141 136 chr5 15135981 15136543 -187948989 - L1MD3 LINE L1 -584 7411 6720 900 294 49 53 chr5 15137245 15137738 -187947794 - MLT1J LTR MaLR 0 511 21 24 32 0 0 chr5 15139562 15139593 -187945939 + AT_rich Low_complexity Low_complexity 1 31 0 503 230 37 15 chr5 15141379 15141514 -187944018 - MLT1E LTR MaLR -455 138 1 1330 210 162 125 chr5 15141572 15142158 -187943374 + MLT1E2 LTR MaLR 43 622 -4 185 208 42 10 chr5 15142314 15142410 -187943122 + (TA)n Simple_repeat Simple_repeat 1 99 0 1206 105 2 0 chr5 15143268 15143738 -187941794 + (CTA)n Simple_repeat Simple_repeat 1 471 0 4367 184 85 14 chr5 15143827 15145105 -187940427 - L1MA5A LINE L1 -5 6292 4939 6784 174 25 29 chr5 15145169 15145859 -187939673 - L1MA5A LINE L1 -1207 4939 4247 6919 60 8 0 chr5 15145859 15147219 -187938313 - L1PA7 LINE L1 -11 6143 4778 6784 174 25 29 chr5 15147219 15148030 -187937502 - L1MA5A LINE L1 -1899 4247 3445 4635 172 48 39 chr5 15148024 15149164 -187936368 + L1MA5A LINE L1 2296 3446 -2700 * 796 180 0 0 chr5 15149166 15149327 -187936205 - MER53 DNA DNA -28 161 1 2399 91 0 0 chr5 15149642 15149949 -187935583 - AluY SINE Alu -4 307 1 21 0 0 0 chr5 15150210 15150231 -187935301 + AT_rich Low_complexity Low_complexity 1 21 0 2075 161 70 0 chr5 15150239 15150611 -187934921 - L1MC3 LINE L1 -88 7697 7300 2134 132 0 16 chr5 15151416 15151719 -187933813 - AluSg SINE Alu -12 298 1 258 209 43 87 chr5 15153336 15153451 -187932081 - L2 LINE L2 -100 3213 3104 235 330 21 0 chr5 15153669 15153763 -187931769 - L2 LINE L2 -669 2645 2550 281 266 34 110 chr5 15154871 15155108 -187930424 + L2 LINE L2 2834 3052 -261 24 53 0 0 chr5 15155376 15155414 -187930118 + AT_rich Low_complexity Low_complexity 1 38 0 211 280 32 89 chr5 15156099 15156256 -187929276 + L2 LINE L2 3153 3300 -13 540 267 56 11 chr5 15156446 15156626 -187928906 - MER5A DNA MER1_type 0 189 2 310 312 172 13 chr5 15156915 15157072 -187928460 - MIR SINE MIR -67 195 14 283 325 67 8 chr5 15157485 15157605 -187927927 - MIR SINE MIR -113 149 23 342 265 31 10 chr5 15157715 15157813 -187927719 - L2 LINE L2 0 3313 3214 260 179 0 0 chr5 15157872 15157928 -187927604 + MLT2C2 LTR ERVL 1 56 -408 2080 273 111 36 chr5 15157928 15159182 -187926350 - L2 LINE L2 -124 3189 1835 192 158 0 0 chr5 15161019 15161057 -187924475 + (CA)n Simple_repeat Simple_repeat 2 39 0 2000 208 18 0 chr5 15161080 15161479 -187924053 - MLT2C2 LTR ERVL -58 406 1 23 33 0 0 chr5 15162200 15162230 -187923302 + AT_rich Low_complexity Low_complexity 1 30 0 772 52 0 0 chr5 15162233 15162330 -187923202 - L1PA7 LINE L1 -6 6148 6052 2120 130 45 28 chr5 15162941 15163294 -187922238 + THE1B LTR MaLR 6 364 0 492 336 86 12 chr5 15163297 15163541 -187921991 - MLT1K LTR MaLR -172 416 155 29 60 0 0 chr5 15163899 15163949 -187921583 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 15164292 15164316 -187921216 + AT_rich Low_complexity Low_complexity 1 24 0 5314 165 29 11 chr5 15164545 15165141 -187920391 - L1MA6 LINE L1 -4 6296 5712 261 0 0 0 chr5 15165141 15165170 -187920362 + (TA)n Simple_repeat Simple_repeat 2 30 0 5314 165 29 11 chr5 15165170 15165921 -187919611 - L1MA6 LINE L1 -588 5712 4924 22 0 0 0 chr5 15166727 15166749 -187918783 + AT_rich Low_complexity Low_complexity 1 22 0 734 299 83 64 chr5 15167084 15167560 -187917972 - MLT1G1 LTR MaLR -4 591 101 2468 129 11 5 chr5 15167560 15167933 -187917599 + THE1C LTR MaLR 1 375 0 734 299 83 64 chr5 15167933 15168021 -187917511 - MLT1G1 LTR MaLR -494 101 16 316 350 10 0 chr5 15168039 15168142 -187917390 - MIR SINE MIR -6 256 153 252 367 114 6 chr5 15168533 15168691 -187916841 - MIR3 SINE MIR -10 198 24 23 33 0 0 chr5 15169393 15169423 -187916109 + AT_rich Low_complexity Low_complexity 1 30 0 261 189 38 0 chr5 15169792 15169845 -187915687 + MLT1B LTR MaLR 1 55 -335 246 128 0 0 chr5 15170495 15170534 -187914998 + (A)n Simple_repeat Simple_repeat 1 39 0 965 218 29 124 chr5 15170537 15170923 -187914609 + MLT1B LTR MaLR 42 390 0 706 335 30 46 chr5 15171181 15171641 -187913891 + L1MB1 LINE L1 173 625 -5688 605 79 0 11 chr5 15171768 15171857 -187913675 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 2431 240 42 32 chr5 15171900 15173111 -187912421 + L1MB1 LINE L1 795 1895 -4489 10084 215 44 29 chr5 15173244 15173636 -187911896 + L1MB1 LINE L1 2170 2555 -3849 2187 173 28 30 chr5 15173636 15174063 -187911469 - MSTB LTR MaLR 0 426 1 10084 215 44 29 chr5 15174063 15174172 -187911360 + L1MB1 LINE L1 2555 2661 -3743 245 75 25 0 chr5 15174172 15174212 -187911320 + (TA)n Simple_repeat Simple_repeat 2 42 0 10084 215 44 29 chr5 15174212 15174372 -187911160 + L1MB1 LINE L1 2661 2817 -3587 1706 189 33 19 chr5 15174372 15174732 -187910800 - MLT1A1 LTR MaLR 0 365 1 10084 215 44 29 chr5 15174732 15174977 -187910555 + L1MB1 LINE L1 2817 3057 -3347 4129 162 25 6 chr5 15174977 15175685 -187909847 + MER72 LTR ERV1 1 722 0 10084 215 44 29 chr5 15175685 15176236 -187909296 + L1MB1 LINE L1 3057 3598 -2806 1363 255 28 6 chr5 15176236 15176593 -187908939 - MLT1A1 LTR MaLR 0 365 1 10084 215 44 29 chr5 15176593 15177401 -187908131 + L1MB1 LINE L1 3598 4393 -2011 386 52 0 17 chr5 15177401 15177459 -187908073 + (CA)n Simple_repeat Simple_repeat 2 58 0 10084 215 44 29 chr5 15177459 15177623 -187907909 + L1MB1 LINE L1 4393 4553 -1851 1817 219 14 0 chr5 15177623 15177980 -187907552 - MLT1A1 LTR MaLR 0 365 4 10084 215 44 29 chr5 15177980 15179467 -187906065 + L1MB1 LINE L1 4553 6155 -249 1117 226 80 50 chr5 15179696 15180059 -187905473 + MLT1A2 LTR MaLR 1 374 0 400 313 95 9 chr5 15184041 15184507 -187901025 + L1ME4a LINE L1 5316 5822 -299 306 264 85 0 chr5 15184606 15184712 -187900820 + L1ME4a LINE L1 6004 6118 -3 384 275 26 52 chr5 15187965 15188158 -187897374 - MIR SINE MIR -53 209 22 26 0 0 0 chr5 15188801 15188827 -187896705 + AT_rich Low_complexity Low_complexity 1 26 0 417 292 134 90 chr5 15191900 15192753 -187892779 + L1M2 LINE L1 291 1142 -5707 209 319 11 11 chr5 15193303 15193394 -187892138 + CT-rich Low_complexity Low_complexity 3 93 0 315 293 16 81 chr5 15195824 15195947 -187889585 - L2 LINE L2 0 3313 3199 236 273 0 45 chr5 15196591 15196679 -187888853 + MIR SINE MIR 172 255 -7 250 322 41 25 chr5 15197571 15197692 -187887840 - L2 LINE L2 0 3313 3191 894 171 84 60 chr5 15197890 15198281 -187887251 - MLT1C LTR MaLR 0 390 1 196 253 0 133 chr5 15198331 15198414 -187887118 - L2 LINE L2 -44 3269 3198 396 103 0 0 chr5 15199196 15199254 -187886278 + (TG)n Simple_repeat Simple_repeat 2 59 0 212 365 67 10 chr5 15200592 15200696 -187884836 - L3 LINE CR1 -249 1328 1219 656 181 44 0 chr5 15200700 15200882 -187884650 - Charlie5 DNA MER1_type 0 2624 2435 2313 93 0 0 chr5 15200882 15201184 -187884348 - AluY SINE Alu -9 302 1 180 303 79 46 chr5 15201212 15201364 -187884168 - L3 LINE CR1 -686 891 735 192 290 73 73 chr5 15201546 15201670 -187883862 - L3 LINE CR1 -1083 494 371 389 295 9 9 chr5 15201823 15201935 -187883597 - MIR3 SINE MIR -7 201 90 189 366 24 0 chr5 15202567 15202649 -187882883 + MIR SINE MIR 151 234 -28 354 100 0 0 chr5 15203814 15203874 -187881658 + (TC)n Simple_repeat Simple_repeat 2 61 0 277 260 24 51 chr5 15203876 15204245 -187881287 + MLT1G LTR MaLR 190 584 -6 516 250 18 0 chr5 15204741 15204909 -187880623 - MER104 DNA Tc2 -5 175 5 209 56 0 28 chr5 15205924 15205960 -187879572 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 213 372 28 28 chr5 15206441 15206586 -187878946 - MIR3 SINE MIR -6 202 58 2273 253 24 33 chr5 15207508 15208451 -187877081 + L1M4 LINE L1 2844 3778 -2368 1632 188 24 7 chr5 15208480 15208773 -187876759 - AluJb SINE Alu -14 298 1 688 137 41 14 chr5 15209059 15209205 -187876327 - L1MA8 LINE L1 -2 6289 6140 2106 232 58 62 chr5 15209691 15209808 -187875724 - L1ME1 LINE L1 -9 6226 6110 2239 116 0 0 chr5 15209808 15210109 -187875423 + AluSx SINE Alu 1 301 -11 2106 232 58 62 chr5 15210109 15210661 -187874871 - L1ME1 LINE L1 -125 6110 5558 2061 164 0 0 chr5 15210661 15210973 -187874559 - AluJb SINE Alu 0 312 1 2106 232 58 62 chr5 15210973 15211324 -187874208 - L1ME1 LINE L1 -677 5558 5207 2357 92 3 3 chr5 15211324 15211630 -187873902 - AluY SINE Alu -5 306 1 2106 232 58 62 chr5 15211630 15211949 -187873583 - L1ME1 LINE L1 -1028 5207 4888 2459 57 3 0 chr5 15211949 15212245 -187873287 - AluY SINE Alu -13 298 2 2106 232 58 62 chr5 15212245 15212766 -187872766 - L1ME1 LINE L1 -1347 4888 4376 887 270 22 32 chr5 15212767 15212965 -187872567 - L1PA13 LINE L1 -6512 275 76 2065 133 48 23 chr5 15212965 15213319 -187872213 - THE1B LTR MaLR -1 363 1 11204 103 13 4 chr5 15213319 15214884 -187870648 - THE1B-int LTR MaLR 0 1580 1 2061 124 47 47 chr5 15214884 15215077 -187870455 - THE1B LTR MaLR 0 364 169 2225 117 0 0 chr5 15215077 15215384 -187870148 - AluSq SINE Alu -6 307 1 2061 124 47 47 chr5 15215384 15215554 -187869978 - THE1B LTR MaLR -194 170 1 887 270 22 32 chr5 15215554 15215631 -187869901 - L1PA13 LINE L1 -6708 79 1 1795 282 79 27 chr5 15215650 15217761 -187867771 - L1ME1 LINE L1 -2440 3775 1598 685 132 0 0 chr5 15217867 15217981 -187867551 - MLT1A1-int LTR MaLR -1620 115 2 1698 224 6 8 chr5 15217983 15218349 -187867183 - MLT1A1 LTR MaLR 0 365 1 268 290 59 2 chr5 15218451 15218604 -187866928 + HAL1b LINE L1 372 1614 -815 192 234 0 0 chr5 15218779 15218826 -187866706 + (TA)n Simple_repeat Simple_repeat 1 47 0 241 271 24 0 chr5 15218829 15218914 -187866618 + L1MC4 LINE L1 6617 6703 -1339 192 152 0 0 chr5 15218917 15218950 -187866582 + (TA)n Simple_repeat Simple_repeat 2 34 0 654 211 0 0 chr5 15218996 15219110 -187866422 + FLAM_A SINE Alu 1 114 -19 470 304 104 47 chr5 15219177 15219648 -187865884 + L1ME3A LINE L1 4082 4579 -1567 3335 92 0 4 chr5 15219785 15220468 -187865064 + L1PA13 LINE L1 5509 6168 0 317 82 49 16 chr5 15220408 15220469 -187865063 + L1PA13 LINE L1 6101 6163 0 1439 128 179 0 chr5 15220601 15220858 -187864674 + AluJb SINE Alu 1 303 -9 299 291 56 42 chr5 15220912 15221125 -187864407 + L1ME3A LINE L1 5347 5562 -600 409 330 90 29 chr5 15221154 15221466 -187864066 + L1ME3A LINE L1 5528 5858 -312 21 0 0 0 chr5 15222293 15222314 -187863218 + AT_rich Low_complexity Low_complexity 1 21 0 2374 65 0 3 chr5 15223090 15223398 -187862134 + AluY SINE Alu 1 307 -4 291 140 0 0 chr5 15223622 15223672 -187861860 + (CA)n Simple_repeat Simple_repeat 1 50 0 22 35 0 0 chr5 15223959 15223988 -187861544 + AT_rich Low_complexity Low_complexity 1 29 0 415 342 45 23 chr5 15224329 15224639 -187860893 + L1M4 LINE L1 2892 3208 -2938 1517 161 14 3 chr5 15224639 15224930 -187860602 + L1MA9 LINE L1 6017 6310 -2 493 298 72 44 chr5 15225031 15225420 -187860112 + L1M4 LINE L1 3692 4091 -2055 1969 127 3 0 chr5 15225736 15226019 -187859513 + AluY SINE Alu 1 284 -27 222 91 0 0 chr5 15226023 15226056 -187859476 + (TAA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr5 15226574 15226597 -187858935 + AT_rich Low_complexity Low_complexity 1 23 0 2087 99 3 13 chr5 15226933 15227236 -187858296 - AluSc SINE Alu -9 300 1 35 24 0 0 chr5 15228489 15228531 -187857001 + AT_rich Low_complexity Low_complexity 1 42 0 29 0 0 0 chr5 15228714 15228743 -187856789 + AT_rich Low_complexity Low_complexity 1 29 0 1121 67 0 0 chr5 15231112 15231246 -187854286 - AluSg/x SINE Alu -23 289 156 206 320 0 0 chr5 15231412 15231462 -187854070 - MIR SINE MIR -62 146 97 25 95 0 0 chr5 15234441 15234515 -187851017 + AT_rich Low_complexity Low_complexity 1 74 0 201 332 128 33 chr5 15234738 15234949 -187850583 - L2 LINE L2 -570 2744 2514 1803 224 0 38 chr5 15235596 15236072 -187849460 + MER89 LTR ERV1 2 557 -2 1272 286 99 63 chr5 15236074 15236187 -187849345 + MER89-int LTR ERV1 1 108 -6693 1933 143 53 34 chr5 15236187 15236544 -187848988 - THE1B LTR MaLR 0 364 1 1272 286 99 63 chr5 15236544 15236599 -187848933 + MER89-int LTR ERV1 108 160 -6641 1975 134 137 13 chr5 15236599 15236980 -187848552 + MSTA LTR MaLR 1 428 0 1272 286 99 63 chr5 15236980 15237309 -187848223 + MER89-int LTR ERV1 160 534 -6267 261 0 0 0 chr5 15237309 15237338 -187848194 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 1272 286 99 63 chr5 15237338 15237534 -187847998 + MER89-int LTR ERV1 534 721 -6080 2425 251 73 24 chr5 15237584 15238338 -187847194 + MER89-int LTR ERV1 1741 2531 -4270 2350 255 90 58 chr5 15238503 15239457 -187846075 + MER89-int LTR ERV1 213 3328 -3473 2202 288 73 40 chr5 15239470 15240426 -187845106 + MER89-int LTR ERV1 3435 4422 -2379 975 255 15 22 chr5 15240447 15240714 -187844818 - MER89-int LTR ERV1 -2119 4682 4418 507 113 0 0 chr5 15240718 15240798 -187844734 + (GGAA)n Simple_repeat Simple_repeat 2 81 0 320 305 193 27 chr5 15240798 15241043 -187844489 - LTR16B LTR ERVL -151 313 22 1770 190 26 26 chr5 15241043 15241433 -187844099 + MLT1B LTR MaLR 1 390 0 320 305 193 27 chr5 15241433 15241446 -187844086 - LTR16B LTR ERVL -442 22 12 362 250 167 15 chr5 15241480 15241612 -187843920 - MIR SINE MIR -94 168 17 230 330 0 75 chr5 15242133 15242239 -187843293 + MIR3 SINE MIR 64 161 -47 24 0 0 0 chr5 15242642 15242666 -187842866 + AT_rich Low_complexity Low_complexity 1 24 0 185 136 0 23 chr5 15243337 15243381 -187842151 + (ATG)n Simple_repeat Simple_repeat 2 44 0 365 292 31 84 chr5 15243395 15243621 -187841911 - MIR SINE MIR -6 256 43 283 315 117 31 chr5 15243868 15244030 -187841502 + MIR3 SINE MIR 28 203 -5 1772 196 32 50 chr5 15244685 15245124 -187840408 - MSTB2 LTR MaLR -12 445 15 2196 161 57 43 chr5 15245198 15245590 -187839942 - L1MB8 LINE L1 -6 6172 5770 3125 133 36 82 chr5 15245590 15245871 -187839661 - MER7C DNA MER2_type -2426 602 310 2070 125 6 3 chr5 15245871 15246182 -187839350 + AluSx SINE Alu 1 312 0 3125 133 36 82 chr5 15246182 15246530 -187839002 - MER7C DNA MER2_type -2718 310 2 2196 161 57 43 chr5 15246530 15246666 -187838866 - L1MB8 LINE L1 -408 5770 5637 240 35 0 0 chr5 15246735 15246764 -187838768 + (TG)n Simple_repeat Simple_repeat 1 29 0 349 275 37 108 chr5 15347513 15347782 -187737750 + L1ME LINE L1 5548 5797 -324 231 259 0 0 chr5 15348108 15348162 -187737370 + L1ME LINE L1 5368 5421 -753 398 307 71 17 chr5 15348248 15348486 -187737046 + L1ME LINE L1 5497 5747 -374 16912 202 24 28 chr5 15348546 15351574 -187733958 + L1PA15 LINE L1 1990 4971 -2632 2256 89 7 3 chr5 15351574 15351866 -187733666 + AluSg SINE Alu 1 293 -17 16912 202 24 28 chr5 15351866 15354477 -187731055 + L1PA15 LINE L1 4971 7591 -12 185 359 113 0 chr5 15354494 15354600 -187730932 - L2 LINE L2 -33 3239 3122 330 264 38 0 chr5 15354888 15354994 -187730538 + (TA)n Simple_repeat Simple_repeat 2 111 0 195 129 0 0 chr5 15355011 15355042 -187730490 + (TA)n Simple_repeat Simple_repeat 2 32 0 226 217 0 0 chr5 15355042 15355111 -187730421 - L1MC4 LINE L1 -1339 6703 6635 418 392 76 3 chr5 15355159 15355447 -187730085 - L2 LINE L2 -715 2599 2291 387 269 19 0 chr5 15355618 15355726 -187729806 + MLT1L LTR MaLR 142 251 -364 2170 173 57 40 chr5 15356018 15356474 -187729058 + MLT2C2 LTR ERVL 1 464 0 2229 47 0 106 chr5 15356499 15356838 -187728694 - AluY SINE Alu -8 303 1 34 0 0 0 chr5 15357893 15357927 -187727605 + AT_rich Low_complexity Low_complexity 1 34 0 211 315 98 0 chr5 15358047 15358139 -187727393 - L2 LINE L2 0 3313 3213 908 349 44 14 chr5 15358568 15358935 -187726597 - L2 LINE L2 -2795 519 142 464 297 16 23 chr5 15359134 15359262 -187726270 + MER5A DNA MER1_type 9 135 -54 5263 2 0 0 chr5 15359272 15359854 -187725678 + L1HS LINE L1 5558 6139 -16 318 26 0 0 chr5 15359854 15359893 -187725639 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 182 138 0 0 chr5 15359923 15359952 -187725580 - MER5B DNA MER1_type -129 49 21 1515 180 21 28 chr5 15361627 15361910 -187723622 - AluJb SINE Alu -31 281 1 26 64 0 0 chr5 15362059 15362106 -187723426 + AT_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr5 15362366 15362388 -187723144 + AT_rich Low_complexity Low_complexity 1 22 0 2583 155 9 16 chr5 15362748 15363175 -187722357 + MSTC LTR MaLR 5 428 0 896 317 48 8 chr5 15363986 15364342 -187721190 + LTR16A LTR ERVL 76 445 -5 203 179 0 0 chr5 15365705 15365744 -187719788 + (TA)n Simple_repeat Simple_repeat 2 40 0 262 320 10 0 chr5 15365903 15366003 -187719529 + L1M4 LINE L1 4876 4976 -1170 1507 281 112 20 chr5 15366056 15367159 -187718373 + L1MC4 LINE L1 6097 7406 -636 497 305 81 29 chr5 15367207 15367372 -187718160 + L1MC4 LINE L1 7545 7700 -342 2331 69 0 13 chr5 15367372 15367678 -187717854 + AluY SINE Alu 1 302 -9 497 305 81 29 chr5 15367678 15367856 -187717676 + L1MC4 LINE L1 7700 7906 -136 199 338 0 0 chr5 15369091 15369162 -187716370 + L2 LINE L2 3154 3224 -48 1660 233 81 11 chr5 15369172 15369640 -187715892 + MLT1D LTR MaLR 3 503 -2 511 269 22 0 chr5 15369659 15369793 -187715739 - MLT1D LTR MaLR -82 423 287 269 77 0 0 chr5 15370449 15370488 -187715044 - MLT2A2 LTR ERVL -414 39 1 332 155 0 17 chr5 15370488 15370546 -187714986 - MLT1A1-int LTR MaLR -1310 61 5 1272 184 30 110 chr5 15370553 15370585 -187714947 - MLT1A1 LTR MaLR -4 453 420 2693 7 0 0 chr5 15370585 15370880 -187714652 + AluYa5 SINE Alu 17 311 0 1272 184 30 110 chr5 15370880 15371248 -187714284 - MLT1A1 LTR MaLR -37 420 1 1978 258 21 2 chr5 15371254 15371769 -187713763 - L1ME1 LINE L1 -58 6108 5584 1747 118 20 0 chr5 15371776 15372031 -187713501 + AluSq SINE Alu 1 260 -53 2766 143 5 5 chr5 15372087 15372515 -187713017 + MSTA LTR MaLR 1 428 0 653 194 252 34 chr5 15372528 15372822 -187712710 + LTR37A LTR ERV1 61 418 -8 970 283 77 74 chr5 15372830 15373452 -187712080 - L1ME LINE L1 -5446 624 1 21 71 0 0 chr5 15376841 15376883 -187708649 + AT_rich Low_complexity Low_complexity 1 42 0 41 58 0 0 chr5 15377221 15377290 -187708242 + AT_rich Low_complexity Low_complexity 1 69 0 810 269 60 62 chr5 15378641 15379087 -187706445 + MLT1E LTR MaLR 3 504 -89 929 193 6 11 chr5 15379087 15379263 -187706269 - FAM SINE Alu 0 175 1 810 269 60 62 chr5 15379263 15379353 -187706179 + MLT1E LTR MaLR 504 593 0 197 159 23 0 chr5 15381936 15381980 -187703552 + CT-rich Low_complexity Low_complexity 3 47 0 261 374 106 11 chr5 15382810 15382989 -187702543 + L2 LINE L2 3073 3268 -4 452 222 0 9 chr5 15383131 15383239 -187702293 + FLAM_C SINE Alu 1 107 -36 1863 156 148 8 chr5 15383458 15383829 -187701703 - MSTA LTR MaLR 0 428 6 181 339 142 47 chr5 15384252 15384379 -187701153 - L2 LINE L2 0 3272 3134 2315 81 0 3 chr5 15385413 15385710 -187699822 + AluY SINE Alu 1 296 -15 263 349 37 9 chr5 15385785 15385894 -187699638 + MIR SINE MIR 30 141 -121 27 0 0 0 chr5 15385961 15385988 -187699544 + AT_rich Low_complexity Low_complexity 1 27 0 1501 173 3 48 chr5 15385989 15386140 -187699392 - AluJo SINE Alu -30 282 149 192 97 0 0 chr5 15386140 15386171 -187699361 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1501 173 3 48 chr5 15386171 15386308 -187699224 - AluJo SINE Alu -163 149 7 225 287 43 85 chr5 15386708 15386896 -187698636 + MIR3 SINE MIR 1 180 -28 36 23 0 0 chr5 15387678 15387721 -187697811 + AT_rich Low_complexity Low_complexity 1 43 0 5069 102 7 0 chr5 15387722 15388441 -187697091 - L1PA10 LINE L1 -5 6163 5440 2219 157 14 0 chr5 15388458 15388873 -187696659 + L1P LINE L1 2955 3375 -2771 271 301 124 26 chr5 15389211 15389437 -187696095 + L2 LINE L2 2614 2861 -453 670 298 39 21 chr5 15389535 15389923 -187695609 - L1 LINE L1 -2161 3985 3587 205 86 0 29 chr5 15390084 15390119 -187695413 + (CTTTA)n Simple_repeat Simple_repeat 2 35 0 24 32 0 0 chr5 15390427 15390458 -187695074 + AT_rich Low_complexity Low_complexity 1 31 0 2225 98 0 22 chr5 15390689 15391032 -187694500 - AluSc SINE Alu 0 336 1 376 378 22 16 chr5 15391138 15391323 -187694209 + L2 LINE L2 2829 3014 -299 5410 159 108 8 chr5 15391326 15392373 -187693159 - Tigger1 DNA MER2_type -1266 1152 1 1352 228 94 12 chr5 15394874 15395216 -187690316 - MLT1A2 LTR MaLR -4 370 1 1948 235 65 5 chr5 15395216 15395663 -187689869 - MLT1A2-int LTR MaLR 0 1735 1262 230 344 0 16 chr5 15395659 15395720 -187689812 - MLT1A2-int LTR MaLR -416 1319 1260 * 2233 219 68 3 chr5 15395850 15396487 -187689045 - MLT1A2-int LTR MaLR -482 889 1 685 248 57 1 chr5 15396491 15396796 -187688736 - MLT1A2 LTR MaLR -4 370 7 30445 118 12 56 chr5 15397616 15404039 -187681493 - L1PA7 LINE L1 -8 6146 18 588 331 12 6 chr5 15404041 15404207 -187681325 - LTR16C LTR ERVL -257 234 68 28 0 0 0 chr5 15404719 15404747 -187680785 + AT_rich Low_complexity Low_complexity 1 28 0 1568 132 0 60 chr5 15404796 15405077 -187680455 - L1P LINE L1 -2521 3625 3362 1662 132 16 0 chr5 15405172 15405422 -187680110 - MER47A DNA MER2_type -100 266 13 2516 59 0 0 chr5 15405530 15405836 -187679696 + AluY SINE Alu 1 306 -5 4653 194 25 6 chr5 15406310 15407297 -187678235 + L1 LINE L1 3382 4387 -1759 245 305 12 0 chr5 15407296 15407378 -187678154 + L1PB4 LINE L1 2632 2714 -3432 * 1393 133 4 34 chr5 15407377 15407751 -187677781 + L1MA2 LINE L1 5117 5479 -743 2652 168 21 6 chr5 15407751 15408265 -187677267 + L1MA2 LINE L1 5774 6298 -6 2010 188 22 18 chr5 15408265 15408713 -187676819 + L1PB4 LINE L1 4364 4813 -1333 1873 178 14 6 chr5 15408812 15409160 -187676372 + L1PB4 LINE L1 5432 5782 -374 737 242 6 17 chr5 15409165 15409343 -187676189 + FRAM SINE Alu 1 176 0 282 70 0 53 chr5 15409345 15409402 -187676130 + (GGA)n Simple_repeat Simple_repeat 3 56 0 804 220 12 3 chr5 15409428 15409743 -187675789 + GA-rich Low_complexity Low_complexity 1 317 0 1909 150 48 3 chr5 15409751 15410085 -187675447 + L1PB4 LINE L1 5770 6118 -38 1622 173 29 45 chr5 15410104 15410156 -187675376 + L1MA9 LINE L1 5937 5988 -324 1566 165 210 11 chr5 15410156 15410513 -187675019 + MSTA LTR MaLR 1 428 0 1622 173 29 45 chr5 15410513 15410842 -187674690 + L1MA9 LINE L1 5988 6312 0 21 0 0 0 chr5 15411486 15411507 -187674025 + AT_rich Low_complexity Low_complexity 1 21 0 257 232 107 54 chr5 15412190 15412302 -187673230 - L1MDa LINE L1 -4567 1859 1592 25 65 0 0 chr5 15412697 15412743 -187672789 + AT_rich Low_complexity Low_complexity 1 46 0 2405 130 5 16 chr5 15412788 15413156 -187672376 - THE1B LTR MaLR 0 364 1 657 326 72 14 chr5 15413166 15413608 -187671924 - L1MDa LINE L1 -5219 1197 730 195 42 0 0 chr5 15414767 15414791 -187670741 + (TA)n Simple_repeat Simple_repeat 2 25 0 24 53 0 0 chr5 15415143 15415181 -187670351 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr5 15417479 15417510 -187668022 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 15418123 15418148 -187667384 + AT_rich Low_complexity Low_complexity 1 25 0 228 252 237 37 chr5 15418247 15418382 -187667150 + MLT1H LTR MaLR 1 162 -387 354 295 161 51 chr5 15418447 15418664 -187666868 + MLT1H LTR MaLR 309 549 0 28 0 0 0 chr5 15418739 15418767 -187666765 + AT_rich Low_complexity Low_complexity 1 28 0 51 65 0 0 chr5 15418805 15418898 -187666634 + AT_rich Low_complexity Low_complexity 1 93 0 16805 210 18 20 chr5 15418928 15424194 -187661338 - L1PA15 LINE L1 -15 7588 2319 261 348 89 19 chr5 15425197 15425456 -187660076 - L1PA15 LINE L1 -7301 280 4 2861 38 8 16 chr5 15425625 15425991 -187659541 - L1PA6 LINE L1 -5 6149 5787 12042 68 11 0 chr5 15425991 15428089 -187657443 - L1PA6 LINE L1 -298 5856 3734 1538 154 0 8 chr5 15428791 15429044 -187656488 - L1MC1 LINE L1 -14 6319 6069 309 133 0 0 chr5 15429091 15429136 -187656396 - L1MC1 LINE L1 -2171 5637 5593 1540 115 5 9 chr5 15429136 15429381 -187656151 - AluSg/x SINE Alu 0 311 68 13427 138 12 16 chr5 15429381 15431598 -187653934 - L1P LINE L1 -3927 2219 11 22 0 0 0 chr5 15432163 15432185 -187653347 + AT_rich Low_complexity Low_complexity 1 22 0 2056 68 0 0 chr5 15432461 15432726 -187652806 - L1PA10 LINE L1 -287 5881 5617 1718 114 38 0 chr5 15432722 15432984 -187652548 + L1PA10 LINE L1 5877 6148 -20 * 333 0 0 0 chr5 15432987 15433024 -187652508 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 6512 151 43 13 chr5 15433267 15434462 -187651070 - Tigger3b DNA MER2_type 0 1231 1 223 299 15 0 chr5 15435321 15435388 -187650144 + MIR3 SINE MIR 119 186 -22 566 212 68 0 chr5 15436614 15436760 -187648772 - L1MD2 LINE L1 -22 6337 6182 270 81 0 0 chr5 15436768 15436805 -187648727 + (TG)n Simple_repeat Simple_repeat 2 38 0 546 207 0 25 chr5 15436809 15436930 -187648602 - L1MD2 LINE L1 -229 6130 6013 423 308 56 69 chr5 15437066 15437443 -187648089 - LTR16C LTR ERVL -3 488 117 1344 170 156 22 chr5 15437763 15437808 -187647724 - MLT2D LTR ERVL 0 414 376 906 29 36 7 chr5 15437808 15437947 -187647585 + (TAGA)n Simple_repeat Simple_repeat 2 144 0 1344 170 156 22 chr5 15437947 15438266 -187647266 - MLT2D LTR ERVL -38 376 1 1172 216 57 14 chr5 15439170 15439452 -187646080 + MLT1D LTR MaLR 1 294 -211 442 252 162 56 chr5 15439910 15440176 -187645356 + L2 LINE L2 3020 3313 0 279 167 0 0 chr5 15443368 15443434 -187642098 + GA-rich Low_complexity Low_complexity 2 67 0 1001 172 28 189 chr5 15444610 15444964 -187640568 + MLT1A1 LTR MaLR 64 360 -5 337 324 76 25 chr5 15445952 15446319 -187639213 - L1MEc LINE L1 -4564 1832 1447 29 0 0 0 chr5 15446758 15446787 -187638745 + AT_rich Low_complexity Low_complexity 1 29 0 188 83 0 28 chr5 15447161 15447197 -187638335 + (TA)n Simple_repeat Simple_repeat 2 36 0 2192 177 114 0 chr5 15447707 15448147 -187637385 + LTR44 LTR ERV1 26 515 -4 445 227 70 39 chr5 15448974 15449102 -187636430 - MER20 DNA MER1_type -87 132 1 772 143 42 0 chr5 15449408 15449527 -187636005 + MER2 DNA MER2_type 1 124 -221 468 121 30 202 chr5 15449659 15449857 -187635675 + MER2 DNA MER2_type 125 288 -57 716 325 28 0 chr5 15450235 15450487 -187635045 - MIR SINE MIR -3 259 1 1080 183 27 5 chr5 15450849 15451068 -187634464 + MLT1C LTR MaLR 1 224 -243 351 270 98 54 chr5 15553640 15553844 -187531688 - L1MC4 LINE L1 -1 8041 7829 594 211 34 91 chr5 15553886 15554095 -187531437 - L1ME2 LINE L1 -19 6145 5949 408 144 22 44 chr5 15554161 15554251 -187531281 - L1M1 LINE L1 -512 5793 5706 286 114 0 0 chr5 15554246 15554290 -187531242 + L1M2 LINE L1 5787 5830 -482 * 817 362 111 21 chr5 15554292 15555106 -187530426 + L2 LINE L2 2075 2961 -353 2186 117 3 7 chr5 15555265 15555572 -187529960 + AluSx SINE Alu 1 306 -6 360 269 19 10 chr5 15555609 15555713 -187529819 + MLT1J LTR MaLR 119 223 -288 300 200 0 0 chr5 15555809 15555879 -187529653 + (CA)n Simple_repeat Simple_repeat 2 71 0 287 339 79 18 chr5 15555992 15556157 -187529375 + L2 LINE L2 3139 3313 0 228 341 23 0 chr5 15556258 15556346 -187529186 - MER5B DNA MER1_type -82 96 7 339 96 0 0 chr5 15557014 15557066 -187528466 + (TA)n Simple_repeat Simple_repeat 1 52 0 385 168 30 30 chr5 15558032 15558133 -187527399 - MER53 DNA DNA -88 101 1 411 208 0 0 chr5 15558252 15558324 -187527208 + LTR16B LTR ERVL 393 464 0 351 271 98 20 chr5 15559042 15559294 -187526238 + L1ME1 LINE L1 5914 6141 -25 185 0 40 0 chr5 15559663 15559688 -187525844 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 336 303 70 13 chr5 15559948 15560149 -187525383 + L1MEc LINE L1 1010 1196 -5009 4617 68 45 0 chr5 15560149 15560750 -187524782 + MER11D LTR ERVK 270 897 0 7842 207 24 19 chr5 15560750 15563301 -187522231 - L1MA6 LINE L1 -328 5972 3338 574 200 9 0 chr5 15563302 15563407 -187522125 - U6 snRNA snRNA 0 107 2 342 306 110 23 chr5 15563416 15563635 -187521897 + L1MEc LINE L1 1220 1457 -4758 236 316 32 0 chr5 15563661 15563756 -187521776 + L1MC4 LINE L1 7573 7670 -372 1575 294 37 55 chr5 15564785 15565405 -187520127 + L1MA5 LINE L1 1 609 -6600 11889 236 35 36 chr5 15565756 15567375 -187518157 + L1MA5 LINE L1 1762 3381 -3827 1704 163 176 6 chr5 15567375 15567738 -187517794 + MSTA LTR MaLR 1 425 -3 11889 236 35 36 chr5 15567738 15568646 -187516886 + L1MA5 LINE L1 3381 4288 -2920 2160 176 31 12 chr5 15568646 15569066 -187516466 - MSTA LTR MaLR 0 428 1 11889 236 35 36 chr5 15569066 15571190 -187514342 + L1MA5 LINE L1 4288 6415 -793 836 88 64 0 chr5 15571190 15571315 -187514217 + MER85 DNA T2_type 1 133 -6 4905 163 30 4 chr5 15571316 15572239 -187513293 + L1MA5 LINE L1 6414 7360 -2 2492 253 40 12 chr5 15573052 15573772 -187511760 - L1ME1 LINE L1 -44 6122 5383 288 111 0 0 chr5 15573863 15573908 -187511624 + (GAAAA)n Simple_repeat Simple_repeat 2 46 0 1288 175 13 4 chr5 15574004 15574233 -187511299 + AluJb SINE Alu 82 312 0 450 324 92 33 chr5 15574435 15574770 -187510762 + L1M4 LINE L1 3392 3769 -2377 679 127 40 33 chr5 15574770 15574920 -187510612 + L1MA9 LINE L1 6162 6312 0 450 324 92 33 chr5 15574920 15575093 -187510439 + L1M4 LINE L1 3769 3930 -2216 763 234 139 50 chr5 15575237 15575284 -187510248 + LTR37B LTR ERV1 10 51 -417 1812 157 149 11 chr5 15575284 15575660 -187509872 - MSTA LTR MaLR 0 428 1 763 234 139 50 chr5 15575660 15575898 -187509634 + LTR37B LTR ERV1 51 346 -122 189 0 0 0 chr5 15575898 15575919 -187509613 + (TA)n Simple_repeat Simple_repeat 1 21 0 763 234 139 50 chr5 15575919 15576050 -187509482 + LTR37B LTR ERV1 346 464 -4 24 32 0 0 chr5 15576165 15576196 -187509336 + AT_rich Low_complexity Low_complexity 1 31 0 416 226 59 58 chr5 15577047 15577273 -187508259 + MER5C DNA MER1_type 6 321 -3 1828 206 72 28 chr5 15579164 15579624 -187505908 - L1MB7 LINE L1 0 6184 5705 1616 175 22 3 chr5 15579624 15579938 -187505594 + L1MB1 LINE L1 5848 6167 -1 243 0 0 0 chr5 15580004 15580031 -187505501 + (T)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr5 15580266 15580293 -187505239 + AT_rich Low_complexity Low_complexity 1 27 0 26 30 0 0 chr5 15581751 15581784 -187503748 + AT_rich Low_complexity Low_complexity 1 33 0 212 402 0 0 chr5 15582155 15582237 -187503295 + MIR SINE MIR 32 113 -149 324 307 150 38 chr5 15582812 15583105 -187502427 + L2 LINE L2 2827 3152 -161 288 307 59 10 chr5 15583132 15583233 -187502299 - MIR SINE MIR -125 137 32 244 349 148 10 chr5 15583499 15583708 -187501824 + MIR SINE MIR 18 255 -7 596 187 2 15 chr5 15583753 15583888 -187501644 - L1MD3 LINE L1 -1 7980 7666 510 250 78 31 chr5 15583877 15584069 -187501463 - L1MC4 LINE L1 -1226 6816 6616 * 23 33 0 0 chr5 15584191 15584221 -187501311 + AT_rich Low_complexity Low_complexity 1 30 0 3604 146 74 9 chr5 15584303 15584993 -187500539 + L1MA6 LINE L1 5564 6298 -2 1551 167 6 77 chr5 15585039 15585362 -187500170 - AluJo SINE Alu -12 300 1 4134 98 48 32 chr5 15585515 15586168 -187499364 - L1PA13 LINE L1 -4 6159 5497 4090 226 50 2 chr5 15586168 15586970 -187498562 - L1PA13 LINE L1 -5923 864 25 1745 162 66 41 chr5 15587089 15587453 -187498079 + Tigger2 DNA MER2_type 2334 2706 -12 3528 257 90 12 chr5 15587636 15589125 -187496407 + L1M4b LINE L1 1098 2693 -4874 435 258 0 0 chr5 15589128 15589221 -187496311 + MLT1A2 LTR MaLR 1 93 -281 225 182 0 0 chr5 15589232 15589265 -187496267 + MLT1A2 LTR MaLR 237 269 -96 231 94 0 0 chr5 15589292 15589324 -187496208 + LTR9 LTR ERV1 581 612 0 316 175 111 0 chr5 15589373 15589436 -187496096 + MLT1A2 LTR MaLR 293 362 -12 1401 244 40 93 chr5 15589475 15590118 -187495414 + LTR9 LTR ERV1 4 612 0 425 290 6 12 chr5 15590187 15590349 -187495183 + L1M4b LINE L1 2850 3010 -4555 2222 154 21 14 chr5 15590584 15591005 -187494527 + L1MA3 LINE L1 5882 6305 0 325 254 55 26 chr5 15591101 15591389 -187494143 + L1M4b LINE L1 3364 3625 -3942 374 284 69 0 chr5 15591420 15591536 -187493996 + L1M4b LINE L1 4567 4690 -2875 702 217 60 9 chr5 15591547 15591764 -187493768 + L1MB8 LINE L1 3657 3884 -3681 * 2038 250 28 17 chr5 15591762 15592507 -187493025 + L1MB8 LINE L1 4531 5283 -2282 1561 181 19 161 chr5 15592508 15592949 -187492583 + LTR60 LTR ERV1 1 340 -246 2091 164 22 11 chr5 15592949 15593320 -187492212 - THE1C LTR MaLR 0 375 1 1561 181 19 161 chr5 15593320 15593462 -187492070 + LTR60 LTR ERV1 340 501 -85 855 175 86 129 chr5 15593341 15593667 -187491865 + TAR1 Satellite telomeric 2 313 -1798 * 3937 212 54 73 chr5 15593667 15593801 -187491731 + L1MB8 LINE L1 5282 5417 -2186 2244 124 48 20 chr5 15593801 15594155 -187491377 + THE1B LTR MaLR 1 364 0 3937 212 54 73 chr5 15594155 15594267 -187491265 + L1MB8 LINE L1 5417 5530 -2073 3124 92 0 22 chr5 15594267 15594724 -187490808 - L1PA7 LINE L1 -5 6149 5703 3937 212 54 73 chr5 15594724 15595453 -187490079 + L1MB8 LINE L1 5530 6271 -1332 2254 74 0 3 chr5 15595453 15595759 -187489773 + AluY SINE Alu 2 306 0 3937 212 54 73 chr5 15595759 15595975 -187489557 + L1MB8 LINE L1 6271 6490 -1113 3828 111 45 2 chr5 15595975 15596552 -187488980 - LTR43 LTR ERV1 0 602 1 3937 212 54 73 chr5 15596552 15596846 -187488686 + L1MB8 LINE L1 6490 6788 -815 4368 110 16 6 chr5 15596846 15597484 -187488048 + LTR9B LTR ERV1 1 644 0 3937 212 54 73 chr5 15597484 15597945 -187487587 + L1MB8 LINE L1 6788 7206 -397 2240 145 78 15 chr5 15597947 15598150 -187487382 + LTR59 LTR ERV1 1 190 -407 4475 135 54 4 chr5 15598150 15598892 -187486640 - MER4E LTR ERV1 0 779 1 2240 145 78 15 chr5 15598892 15599096 -187486436 + LTR59 LTR ERV1 190 434 -163 6222 146 1 24 chr5 15599114 15599500 -187486032 - L1PB1 LINE L1 -2 6149 5756 234 0 0 0 chr5 15599500 15599526 -187486006 + (GA)n Simple_repeat Simple_repeat 2 27 0 6222 146 1 24 chr5 15599526 15600525 -187485007 - L1PB1 LINE L1 -395 5756 4800 2170 120 0 0 chr5 15600525 15600825 -187484707 - AluSg SINE Alu -10 300 1 6222 146 1 24 chr5 15600825 15600929 -187484603 - L1PB1 LINE L1 -1351 4800 4695 891 179 0 35 chr5 15600929 15601102 -187484430 + LTR59 LTR ERV1 426 592 -5 1228 223 67 32 chr5 15601105 15601478 -187484054 + L1MB8 LINE L1 7211 7596 -1 190 209 70 116 chr5 15602031 15602117 -187483415 - MIR SINE MIR -116 146 65 279 349 83 18 chr5 15603889 15604118 -187481414 - LTR16A1 LTR ERVL 0 457 214 353 259 143 19 chr5 15604315 15604493 -187481039 - MLT1H1 LTR MaLR -305 250 73 622 333 15 26 chr5 15604574 15604838 -187480694 - HERVL40 LTR ERVL -4017 1513 1253 1264 297 59 34 chr5 15604911 15605416 -187480116 - HERVL40 LTR ERVL -4415 1115 598 2289 85 0 19 chr5 15605444 15605762 -187479770 - AluSx SINE Alu 0 312 1 923 227 82 32 chr5 15605942 15606277 -187479255 + MSTD LTR MaLR 8 396 0 608 275 22 17 chr5 15606313 15606491 -187479041 - MLT1J2 LTR MaLR -251 199 21 21 0 0 0 chr5 15607566 15607587 -187477945 + AT_rich Low_complexity Low_complexity 1 21 0 2360 67 0 0 chr5 15607674 15607983 -187477549 - AluSg SINE Alu 0 309 1 27 29 0 0 chr5 15608597 15608631 -187476901 + AT_rich Low_complexity Low_complexity 1 34 0 27 73 0 0 chr5 15609206 15609261 -187476271 + AT_rich Low_complexity Low_complexity 1 55 0 2237 112 0 0 chr5 15611399 15611695 -187473837 - AluSg SINE Alu -14 296 1 1684 171 61 25 chr5 15612188 15612550 -187472982 + THE1C LTR MaLR 1 375 0 9643 138 7 33 chr5 15612553 15614139 -187471393 + THE1C-int LTR MaLR 4 1547 -33 2021 102 3 31 chr5 15614402 15614696 -187470836 - AluSp SINE Alu -8 305 20 1390 198 7 4 chr5 15614977 15615250 -187470282 - AluJo SINE Alu -14 298 25 35 41 0 0 chr5 15615622 15615671 -187469861 + AT_rich Low_complexity Low_complexity 1 49 0 2570 48 0 7 chr5 15617113 15617423 -187468109 - AluY SINE Alu 0 311 4 398 281 72 60 chr5 15617424 15617659 -187467873 - L1MDb LINE L1 -5082 1862 1625 271 300 0 0 chr5 15618143 15618213 -187467319 + (TG)n Simple_repeat Simple_repeat 2 71 0 6617 149 19 33 chr5 15618402 15619273 -187466259 - Tigger3b DNA MER2_type -1833 1195 344 2081 123 3 10 chr5 15619273 15619574 -187465958 - AluSx SINE Alu -9 303 5 6617 149 19 33 chr5 15619574 15619913 -187465619 - Tigger3b DNA MER2_type -2684 344 2 2317 53 0 7 chr5 15620276 15620559 -187464973 + AluY SINE Alu 3 283 -28 21 36 0 0 chr5 15621448 15621476 -187464056 + AT_rich Low_complexity Low_complexity 1 28 0 402 313 53 60 chr5 15621886 15621913 -187463619 + L2 LINE L2 1205 1231 -2083 2050 124 59 34 chr5 15621913 15622268 -187463264 - THE1B LTR MaLR 0 364 1 402 313 53 60 chr5 15622268 15622540 -187462992 + L2 LINE L2 1231 1502 -1812 562 217 39 34 chr5 15622541 15622720 -187462812 + MER33 DNA MER1_type 1 166 -93 1023 166 5 0 chr5 15622721 15622908 -187462624 + L1M2 LINE L1 2499 2686 -4163 515 204 34 54 chr5 15622908 15623055 -187462477 + MER33 DNA MER1_type 216 359 -4 2486 315 75 51 chr5 15623065 15624571 -187460961 + L2 LINE L2 1515 3054 -259 204 40 0 0 chr5 15625093 15625118 -187460414 + (A)n Simple_repeat Simple_repeat 1 25 0 210 71 0 0 chr5 15625176 15625204 -187460328 + (TTA)n Simple_repeat Simple_repeat 2 29 0 809 200 7 7 chr5 15625206 15625351 -187460181 - FRAM SINE Alu -30 146 2 22 35 0 0 chr5 15626824 15626853 -187458679 + AT_rich Low_complexity Low_complexity 1 29 0 1108 251 101 79 chr5 15627542 15627831 -187457701 - L1MDb LINE L1 -5017 1406 1125 2243 82 0 16 chr5 15627831 15628147 -187457385 - AluY SINE Alu 0 311 1 1108 251 101 79 chr5 15628147 15628463 -187457069 - L1MDb LINE L1 -5298 1125 788 24 0 0 0 chr5 15630154 15630178 -187455354 + AT_rich Low_complexity Low_complexity 1 24 0 922 186 16 5 chr5 15631682 15631870 -187453662 - Tigger4(Zombi) DNA MER2_type -2 2729 2540 * 1440 159 44 30 chr5 15631858 15632128 -187453404 - MER7A DNA MER2_type -64 282 11 679 343 56 75 chr5 15632346 15633055 -187452477 - L1MEd LINE L1 -5032 1087 392 409 106 0 15 chr5 15633732 15633798 -187451734 + L1PB4 LINE L1 6080 6144 -12 1140 232 89 35 chr5 15634103 15634473 -187451059 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr5 15635812 15635834 -187449698 + AT_rich Low_complexity Low_complexity 1 22 0 450 79 0 0 chr5 15636071 15636134 -187449398 + (TG)n Simple_repeat Simple_repeat 1 63 0 326 320 10 0 chr5 15637507 15637610 -187447922 + GA-rich Low_complexity Low_complexity 2 105 0 201 348 82 27 chr5 15637641 15637825 -187447707 + MIR SINE MIR 22 215 -47 1049 220 102 34 chr5 15637906 15638201 -187447331 - MLT1A1 LTR MaLR 0 365 51 27 81 0 0 chr5 15638271 15638333 -187447199 + AT_rich Low_complexity Low_complexity 1 62 0 289 313 0 24 chr5 15639002 15639085 -187446447 - L1MEd LINE L1 -5467 652 572 284 258 30 91 chr5 15639773 15639905 -187445627 - L2 LINE L2 -1 3271 3148 210 344 43 74 chr5 15639964 15640000 -187445532 - MIR3 SINE MIR -18 190 154 2116 91 0 0 chr5 15640000 15640287 -187445245 + L1PA5 LINE L1 5867 6153 -1 210 344 43 74 chr5 15640287 15640413 -187445119 - MIR3 SINE MIR -54 154 33 34 0 0 0 chr5 15640566 15640600 -187444932 + AT_rich Low_complexity Low_complexity 1 34 0 474 293 223 4 chr5 15642986 15643259 -187442273 - MLT1H LTR MaLR -16 533 201 736 346 74 0 chr5 15643314 15643623 -187441909 - MLT2E LTR ERVL -258 370 39 275 289 91 3 chr5 15643721 15643867 -187441665 - L1ME2 LINE L1 -49 6113 5967 1622 271 89 14 chr5 15643895 15644815 -187440717 - L1MD2 LINE L1 -462 5897 4899 4020 161 1 1 chr5 15644900 15645571 -187439961 - L1PA15 LINE L1 -3 7600 6930 10042 218 49 14 chr5 15645594 15647683 -187437849 - L1PA15 LINE L1 -913 6671 4473 1180 116 83 0 chr5 15647683 15647864 -187437668 + MER107 DNA MER1_type 1 196 -1 10042 218 49 14 chr5 15647864 15648344 -187437188 - L1PA15 LINE L1 -3111 4473 4011 4632 235 31 10 chr5 15648345 15650119 -187435413 - L1PA15 LINE L1 -3749 3835 2022 456 326 39 26 chr5 15651456 15651766 -187433766 - L1PA15 LINE L1 -7261 320 7 1623 264 129 38 chr5 15651787 15653176 -187432356 - L1MCb LINE L1 -4491 2073 570 649 282 116 70 chr5 15653381 15653796 -187431736 - L1MCb LINE L1 -5673 372 65 24 32 0 0 chr5 15653818 15653849 -187431683 + AT_rich Low_complexity Low_complexity 1 31 0 2139 119 0 0 chr5 15654032 15654335 -187431197 - AluY SINE Alu -8 303 1 1774 203 48 8 chr5 15655074 15655449 -187430083 + MLT1B LTR MaLR 1 390 0 190 325 60 0 chr5 15655941 15656024 -187429508 - L2 LINE L2 0 3313 3226 511 325 69 12 chr5 15656659 15656979 -187428553 - MER46C DNA MER2_type 0 338 1 549 311 98 36 chr5 15657114 15657963 -187427569 - HAL1 LINE L1 -732 1775 875 251 362 54 33 chr5 15658296 15658572 -187426960 - HERV16 LTR ERVL -4006 990 709 249 213 16 0 chr5 15658773 15658834 -187426698 - MLT1E3 LTR MaLR 0 624 563 2059 255 74 12 chr5 15658844 15659409 -187426123 - MLT1E3 LTR MaLR -24 600 1 608 211 164 18 chr5 15659549 15659842 -187425690 + MLT1C LTR MaLR 6 352 -38 1240 239 4 0 chr5 15660234 15660502 -187425030 - MLT2D LTR ERVL -141 273 5 2193 104 0 7 chr5 15660506 15660815 -187424717 + AluSc SINE Alu 1 307 -2 240 250 47 0 chr5 15661045 15661109 -187424423 - MIR3 SINE MIR -19 189 123 25 105 0 0 chr5 15661611 15661706 -187423826 + AT_rich Low_complexity Low_complexity 1 95 0 2332 97 0 3 chr5 15661784 15662095 -187423437 - AluSg SINE Alu 0 310 1 22 56 0 0 chr5 15662281 15662317 -187423215 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 15662397 15662426 -187423106 + AT_rich Low_complexity Low_complexity 1 29 0 1699 259 111 8 chr5 15662785 15662806 -187422726 + L1MD2 LINE L1 3796 3813 -2333 5005 52 0 0 chr5 15662806 15663421 -187422111 + L1PA5 LINE L1 5534 6148 -6 1699 259 111 8 chr5 15663421 15664021 -187421511 + L1MD2 LINE L1 3813 4481 -1665 2658 267 98 16 chr5 15664097 15664859 -187420673 + L1MD2 LINE L1 4641 5339 -1020 213 39 0 0 chr5 15664859 15664885 -187420647 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2658 267 98 16 chr5 15664885 15665703 -187419829 + L1MD2 LINE L1 5339 6348 -11 2180 190 13 43 chr5 15665871 15666093 -187419439 + MER74C LTR ERVL 11 213 -247 1865 181 39 31 chr5 15666093 15666480 -187419052 + MLT1B LTR MaLR 1 390 0 2180 190 13 43 chr5 15666480 15666721 -187418811 + MER74C LTR ERVL 213 460 0 293 266 58 22 chr5 15666741 15666880 -187418652 + L1MDa LINE L1 2311 2454 -4086 909 276 121 29 chr5 15666936 15667564 -187417968 + L1MDa LINE L1 2607 3292 -3248 1526 224 94 4 chr5 15667584 15668222 -187417310 - L1MCa LINE L1 -3947 2479 1867 375 183 149 10 chr5 15668225 15668402 -187417130 - MER67D LTR ERV1 0 514 236 1512 239 66 20 chr5 15668403 15668902 -187416630 - L1MCa LINE L1 -4756 1670 1149 246 207 17 0 chr5 15668907 15668965 -187416567 + L1ME2 LINE L1 6079 6137 -27 1412 176 3 76 chr5 15668983 15669272 -187416260 + AluJb SINE Alu 1 268 -44 1544 103 5 5 chr5 15669272 15669486 -187416046 + AluSg/x SINE Alu 93 306 -4 14732 176 25 17 chr5 15671624 15673658 -187411874 - L1MA2 LINE L1 0 7723 5707 2087 118 0 16 chr5 15673658 15673964 -187411568 - AluSx SINE Alu -11 301 1 14732 176 25 17 chr5 15673964 15674983 -187410549 - L1MA2 LINE L1 -2016 5707 4698 2275 88 6 31 chr5 15674983 15675302 -187410230 - AluY SINE Alu 0 311 1 14732 176 25 17 chr5 15675302 15679906 -187405626 - L1MA2 LINE L1 -3025 4698 16 1571 270 56 51 chr5 15680124 15680746 -187404786 + MLT1E2 LTR MaLR 2 626 0 368 262 94 78 chr5 15680808 15680999 -187404533 - MIR SINE MIR -14 248 55 481 271 68 50 chr5 15681004 15681443 -187404089 - Charlie2a DNA MER1_type -486 2376 1930 337 211 61 9 chr5 15681490 15681604 -187403928 - Charlie2a DNA MER1_type -1236 1626 1507 452 349 68 24 chr5 15682514 15682763 -187402769 - MIR SINE MIR 0 262 3 1139 195 46 4 chr5 15683722 15683963 -187401569 + L1PA16 LINE L1 5913 6163 -3 26 64 0 0 chr5 15684012 15684059 -187401473 + AT_rich Low_complexity Low_complexity 1 47 0 1437 301 86 32 chr5 15684175 15684932 -187400600 + L2 LINE L2 20 817 -2497 690 294 84 4 chr5 15684935 15685197 -187400335 + L2 LINE L2 1413 1695 -1619 1049 222 77 14 chr5 15685742 15686039 -187399493 + L1ME1 LINE L1 5847 6162 -4 37 99 0 0 chr5 15686200 15686321 -187399211 + AT_rich Low_complexity Low_complexity 1 121 0 1691 174 65 11 chr5 15686438 15686794 -187398738 + THE1C LTR MaLR 1 375 0 9245 138 12 39 chr5 15686796 15688417 -187397115 + THE1C-int LTR MaLR 3 1580 0 1598 182 78 28 chr5 15688417 15688774 -187396758 + THE1C LTR MaLR 1 375 0 3886 247 43 22 chr5 15688781 15690143 -187395389 + L1M4 LINE L1 3906 5296 -850 630 234 22 0 chr5 15690125 15690309 -187395223 + L1MA7 LINE L1 6104 6291 0 * 293 176 0 0 chr5 15690356 15690407 -187395125 + L1MD3 LINE L1 7749 7799 -196 * 1183 204 40 30 chr5 15690401 15690430 -187395102 + L1MC2 LINE L1 6013 6040 -304 805 241 172 30 chr5 15690430 15690836 -187394696 + MER31B LTR ERV1 3 466 0 1183 204 40 30 chr5 15690836 15691110 -187394422 + L1MC2 LINE L1 6040 6319 -25 366 341 139 8 chr5 15691191 15691443 -187394089 - L2 LINE L2 -1004 2310 2026 335 103 21 98 chr5 15691679 15691873 -187393659 + (TA)n Simple_repeat Simple_repeat 2 180 0 639 87 0 77 chr5 15691920 15692115 -187393417 + (TA)n Simple_repeat Simple_repeat 1 180 0 654 75 0 80 chr5 15692155 15692342 -187393190 + (TA)n Simple_repeat Simple_repeat 1 172 0 726 72 0 77 chr5 15692358 15692553 -187392979 + (TA)n Simple_repeat Simple_repeat 1 180 0 1886 147 4 0 chr5 15692557 15692836 -187392696 - AluSx SINE Alu -32 280 1 241 319 35 26 chr5 15692847 15692963 -187392569 + MER89 LTR ERV1 405 521 -38 1283 244 90 17 chr5 15694150 15694617 -187390915 - MLT1D LTR MaLR 0 505 5 23 0 0 0 chr5 15694774 15694797 -187390735 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 15695586 15695616 -187389916 + AT_rich Low_complexity Low_complexity 1 30 0 413 276 0 0 chr5 15696546 15696644 -187388888 - MER5A DNA MER1_type -81 108 11 23 33 0 0 chr5 15696777 15696807 -187388725 + AT_rich Low_complexity Low_complexity 1 30 0 545 281 79 0 chr5 15697462 15697626 -187387906 + MIR SINE MIR 78 254 -8 1648 172 75 26 chr5 15697626 15697974 -187387558 - MLT1A1 LTR MaLR 0 365 1 646 249 150 43 chr5 15698147 15698400 -187387132 - MER110 LTR ERV1 -6 485 206 293 67 0 22 chr5 15699084 15699129 -187386403 + (TTCCC)n Simple_repeat Simple_repeat 5 48 0 326 195 22 28 chr5 15699137 15699317 -187386215 + CT-rich Low_complexity Low_complexity 1 179 0 307 60 40 0 chr5 15699315 15699365 -187386167 + (TCC)n Simple_repeat Simple_repeat 3 54 0 * 186 226 11 32 chr5 15700187 15700280 -187385252 + GA-rich Low_complexity Low_complexity 2 92 0 246 132 85 19 chr5 15700586 15700692 -187384840 + (TA)n Simple_repeat Simple_repeat 2 114 0 1387 141 60 56 chr5 15700703 15700987 -187384545 - THE1B LTR MaLR 0 364 80 620 51 26 0 chr5 15701129 15701207 -187384325 - THE1B LTR MaLR -284 80 1 340 208 0 62 chr5 15701259 15701355 -187384177 - L1MC4 LINE L1 -1339 6703 6614 48 32 0 0 chr5 15701531 15701593 -187383939 + AT_rich Low_complexity Low_complexity 1 62 0 863 181 80 43 chr5 15701959 15702147 -187383385 - MER20 DNA MER1_type -24 195 1 25 0 0 0 chr5 15702377 15702402 -187383130 + AT_rich Low_complexity Low_complexity 1 25 0 504 278 50 6 chr5 15703082 15703262 -187382270 + MER5A DNA MER1_type 2 189 0 375 23 0 0 chr5 15704162 15704206 -187381326 + (TG)n Simple_repeat Simple_repeat 2 45 0 2291 57 0 17 chr5 15705049 15705348 -187380184 - AluY SINE Alu -17 294 1 251 319 48 32 chr5 15705720 15705908 -187379624 - MARNA DNA Mariner -15 571 381 29 28 0 0 chr5 15705911 15705947 -187379585 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 15706043 15706064 -187379468 + AT_rich Low_complexity Low_complexity 1 21 0 269 109 22 0 chr5 15706107 15706153 -187379379 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 34 24 0 0 chr5 15706185 15706226 -187379306 + AT_rich Low_complexity Low_complexity 1 41 0 1672 147 3 20 chr5 15706483 15706789 -187378743 - AluJo SINE Alu -8 304 4 293 280 0 0 chr5 15707382 15707475 -187378057 + GA-rich Low_complexity Low_complexity 2 94 0 396 0 0 0 chr5 15708763 15708807 -187376725 + (CA)n Simple_repeat Simple_repeat 2 45 0 200 289 0 0 chr5 15708819 15708871 -187376661 + GA-rich Low_complexity Low_complexity 2 53 0 1340 222 40 0 chr5 15708872 15709196 -187376336 - MLT2C2 LTR ERVL -61 336 1 747 313 85 42 chr5 15709199 15709944 -187375588 + L2 LINE L2 2424 3192 -121 29 47 0 0 chr5 15710346 15710389 -187375143 + AT_rich Low_complexity Low_complexity 1 43 0 501 311 8 56 chr5 15710550 15710801 -187374731 + L1MDa LINE L1 102 340 -6200 1653 254 89 24 chr5 15711003 15711990 -187373542 + L1MDa LINE L1 990 5739 -801 1765 239 91 6 chr5 15712051 15712577 -187372955 + L1M2c LINE L1 1387 1957 -4832 654 224 39 54 chr5 15712584 15712843 -187372689 - MER69 DNA AcHobo -91 2435 2181 5182 158 2 36 chr5 15712856 15713874 -187371658 - L1PA15 LINE L1 -2 6163 5180 771 152 0 33 chr5 15714170 15714321 -187371211 + L1MA4 LINE L1 6151 6296 -4 29 28 0 0 chr5 15714368 15714404 -187371128 + AT_rich Low_complexity Low_complexity 1 36 0 7007 51 12 0 chr5 15715501 15717201 -187368331 + L1PA7 LINE L1 4437 6146 -8 1797 187 14 36 chr5 15717646 15718066 -187367466 + MLT1B LTR MaLR 1 390 0 3343 11 0 0 chr5 15718525 15718906 -187366626 - L1HS LINE L1 -1 6154 5774 16219 23 0 0 chr5 15718906 15720834 -187364698 + L1P LINE L1 2419 4346 -1800 2109 72 4 0 chr5 15721855 15722119 -187363413 - AluSq SINE Alu -26 287 23 221 224 35 47 chr5 15723086 15723171 -187362361 + GA-rich Low_complexity Low_complexity 2 85 0 791 355 61 28 chr5 15723285 15723778 -187361754 + LTR33 LTR ERVL 6 514 -7 23 0 0 0 chr5 15724575 15724598 -187360934 + AT_rich Low_complexity Low_complexity 1 23 0 491 254 66 75 chr5 15724772 15724985 -187360547 - MLT1H LTR MaLR -338 211 1 483 291 71 11 chr5 15725495 15725677 -187359855 - MLT1E1 LTR MaLR -83 571 379 399 258 210 0 chr5 15725759 15725926 -187359606 - MLT1E1 LTR MaLR -420 204 3 4406 89 8 2 chr5 15726576 15727184 -187358348 + LTR10E LTR ERV1 1 612 -21 1089 354 70 23 chr5 15727309 15728845 -187356687 + HERVL LTR ERVL 2061 3628 -2026 480 276 76 30 chr5 15729340 15729604 -187355928 + L1ME3 LINE L1 5650 5925 -237 2796 131 9 9 chr5 15729389 15729847 -187355685 + L1PA16 LINE L1 5709 6166 0 396 364 96 29 chr5 15731030 15731373 -187354159 + L2 LINE L2 2942 3307 -6 21 0 0 0 chr5 15732018 15732039 -187353493 + AT_rich Low_complexity Low_complexity 1 21 0 342 67 0 0 chr5 15732696 15732741 -187352791 + (TG)n Simple_repeat Simple_repeat 1 45 0 282 95 0 0 chr5 15732743 15732785 -187352747 + (GA)n Simple_repeat Simple_repeat 2 43 0 17896 200 16 12 chr5 15732946 15739652 -187345880 + L1PA13 LINE L1 1 6746 -68 1003 215 45 4 chr5 15739639 15739885 -187345647 + L1M4 LINE L1 3514 3769 -2377 * 340 222 20 0 chr5 15739891 15739990 -187345542 + L1M4 LINE L1 4949 5049 -1097 2475 198 50 9 chr5 15741436 15741971 -187343561 - MER89 LTR ERV1 -2 557 1 617 347 125 15 chr5 15742011 15742420 -187343112 + L2 LINE L2 2812 3265 -48 487 289 65 18 chr5 15743203 15743542 -187341990 + L1MC/D LINE L1 3105 3459 -2687 391 279 58 0 chr5 15743607 15743779 -187341753 + L1MC/D LINE L1 3592 3773 -2373 1357 250 82 52 chr5 15743871 15744683 -187340849 + L1MC/D LINE L1 4229 5065 -1081 411 21 0 0 chr5 15744834 15744882 -187340650 + (TG)n Simple_repeat Simple_repeat 2 49 0 322 256 11 0 chr5 15744889 15744979 -187340553 + L1ME1 LINE L1 6070 6160 -6 230 346 8 8 chr5 15744986 15745113 -187340419 + L1MEc LINE L1 1624 1750 -4646 308 77 19 0 chr5 15745352 15745404 -187340128 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 1848 137 0 45 chr5 15745406 15745698 -187339834 - AluSx SINE Alu -33 279 1 505 304 60 54 chr5 15745727 15746319 -187339213 + L1MEc LINE L1 2047 2676 -3539 269 209 12 23 chr5 15746374 15746460 -187339072 + L1MC/D LINE L1 5265 5349 -797 487 322 51 30 chr5 15746516 15746811 -187338721 + L1MC/D LINE L1 5462 5762 -2046 337 239 31 8 chr5 15746811 15746941 -187338591 + (TA)n Simple_repeat Simple_repeat 1 133 0 248 299 72 66 chr5 15748197 15748364 -187337168 + L2 LINE L2 2797 2964 -350 342 67 0 0 chr5 15748551 15748596 -187336936 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 268 127 0 chr5 15748597 15748668 -187336864 + L2 LINE L2 3193 3272 0 2669 184 39 35 chr5 15749590 15750182 -187335350 + L1MB1 LINE L1 5547 6140 -49 1739 210 71 5 chr5 15750186 15750385 -187335147 - MSTB LTR MaLR -4 422 237 270 0 0 0 chr5 15750385 15750415 -187335117 + (GA)n Simple_repeat Simple_repeat 1 30 0 1739 210 71 5 chr5 15750415 15750611 -187334921 - MSTB LTR MaLR -189 237 1 4191 179 35 5 chr5 15750611 15751372 -187334160 - MSTB-int LTR MaLR 0 1651 868 1754 159 159 5 chr5 15751481 15751851 -187333681 + MSTA LTR MaLR 1 427 -1 612 116 54 0 chr5 15751855 15751967 -187333565 - L1MA7 LINE L1 -2 6289 6172 2380 67 0 0 chr5 15752453 15752770 -187332762 - AluY SINE Alu 0 317 1 206 259 7 140 chr5 15753375 15753518 -187332014 + L2 LINE L2 3186 3309 -4 951 322 98 33 chr5 15753663 15754232 -187331300 + L1MA6 LINE L1 89 694 -6155 715 321 4 2 chr5 15754470 15754688 -187330844 + L1MA6 LINE L1 1335 1565 -5284 * 3764 235 99 6 chr5 15754685 15755965 -187329567 + L1MA6 LINE L1 2799 4202 -2646 760 73 0 18 chr5 15755969 15756078 -187329454 + LTR7 LTR ERV1 342 448 -2 15538 104 52 12 chr5 15756080 15758919 -187326613 + HERVH LTR ERV1 1 2995 -4718 944 140 7 0 chr5 15758898 15759048 -187326484 + HERVH LTR ERV1 3140 3290 -4423 * 1053 142 0 6 chr5 15759038 15759200 -187326332 + HERVH LTR ERV1 3492 3652 -4061 * 4607 62 5 8 chr5 15759192 15759802 -187325730 + HERVH LTR ERV1 7106 7713 0 1587 127 65 113 chr5 15759802 15760235 -187325297 + LTR7 LTR ERV1 1 412 -38 4611 205 69 52 chr5 15760276 15761084 -187324448 + L1MA6 LINE L1 4212 5005 -2015 1214 123 5 5 chr5 15761084 15761288 -187324244 - L1MA2 LINE L1 0 6304 6101 4611 205 69 52 chr5 15761288 15763184 -187322348 + L1MA6 LINE L1 5005 7020 0 3259 93 9 9 chr5 15763291 15763743 -187321789 - MLT2A2 LTR ERVL -1 452 1 25 31 0 0 chr5 15764394 15764426 -187321106 + AT_rich Low_complexity Low_complexity 1 32 0 2034 131 0 26 chr5 15765294 15765607 -187319925 + AluSg SINE Alu 1 305 -5 252 59 0 0 chr5 15765670 15765704 -187319828 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 278 66 5 chr5 15766017 15766229 -187319303 + MIR SINE MIR 8 232 -30 21 57 0 0 chr5 15766254 15766289 -187319243 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 15766329 15766361 -187319171 + AT_rich Low_complexity Low_complexity 1 32 0 556 115 18 0 chr5 15766657 15766770 -187318762 + (TAGA)n Simple_repeat Simple_repeat 3 117 0 264 353 98 20 chr5 15766778 15767073 -187318459 + L2 LINE L2 2325 2642 -672 327 305 69 11 chr5 15767139 15767313 -187318219 - MIR SINE MIR -16 246 63 185 254 164 74 chr5 15767520 15767642 -187317890 + L2 LINE L2 3139 3271 -1 705 238 84 5 chr5 15768583 15768785 -187316747 - MLT1A1 LTR MaLR 0 365 148 3204 123 20 2 chr5 15768830 15769332 -187316200 - L1PA13 LINE L1 0 6163 5653 549 148 11 0 chr5 15769332 15769420 -187316112 + L1PA13 LINE L1 5529 5620 -543 2353 126 0 17 chr5 15769420 15769776 -187315756 + THE1C LTR MaLR 24 373 -2 14513 186 20 2 chr5 15769783 15772647 -187312885 - L1PA13 LINE L1 -845 5301 2386 561 283 26 7 chr5 15772651 15772803 -187312729 - MLT1A1 LTR MaLR -209 156 2 19615 168 14 10 chr5 15772987 15775655 -187309877 - L1PA11 LINE L1 0 6174 3472 2172 122 24 29 chr5 15775655 15776032 -187309500 + THE1C LTR MaLR 1 375 0 19615 168 14 10 chr5 15776032 15778008 -187307524 - L1PA11 LINE L1 -2702 3472 1507 295 146 18 18 chr5 15778069 15778124 -187307408 - THE1C-int LTR MaLR -1594 57 3 1859 137 76 25 chr5 15778126 15778483 -187307049 - THE1C LTR MaLR 0 375 1 1120 190 35 9 chr5 15778483 15778715 -187306817 - THE1C LTR MaLR -137 238 1 275 267 12 12 chr5 15778745 15778831 -187306701 + LTR37B LTR ERV1 222 307 -161 24 0 0 0 chr5 15779938 15779962 -187305570 + AT_rich Low_complexity Low_complexity 1 24 0 808 222 27 53 chr5 15780555 15780780 -187304752 - MER20 DNA MER1_type 0 219 1 244 214 0 0 chr5 15780973 15781015 -187304517 + MLT1K LTR MaLR 201 242 -346 1375 192 75 153 chr5 15781636 15781674 -187303858 - MER67D LTR ERV1 0 514 475 2358 124 14 8 chr5 15781674 15782036 -187303496 + THE1B LTR MaLR 1 364 0 1375 192 75 153 chr5 15782036 15782554 -187302978 - MER67D LTR ERV1 -39 475 1 21 0 0 0 chr5 15782627 15782648 -187302884 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 15782686 15782721 -187302811 + AT_rich Low_complexity Low_complexity 1 35 0 2551 91 14 0 chr5 15783799 15784149 -187301383 - THE1A LTR MaLR 0 355 1 6215 151 65 7 chr5 15784149 15784743 -187300789 - THE1A-int LTR MaLR 0 1651 1093 1945 138 0 33 chr5 15784743 15785047 -187300485 - AluSq SINE Alu -19 294 1 6215 151 65 7 chr5 15785047 15785877 -187299655 - THE1A-int LTR MaLR -558 1093 3 1865 116 8 0 chr5 15785879 15786146 -187299386 - THE1A LTR MaLR 0 355 87 2367 160 31 12 chr5 15786153 15786571 -187298961 + MSTB LTR MaLR 1 426 0 352 275 0 0 chr5 15786671 15786762 -187298770 - MER3 DNA MER1_type -111 98 8 2231 160 28 28 chr5 15787308 15787740 -187297792 + MSTB1 LTR MaLR 1 432 0 938 338 51 20 chr5 15787961 15788552 -187296980 - L2 LINE L2 -906 2408 1800 30 0 0 0 chr5 15788989 15789019 -187296513 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr5 15789346 15789402 -187296130 + AT_rich Low_complexity Low_complexity 1 56 0 2878 217 133 60 chr5 15789641 15790157 -187295375 - L1MC3 LINE L1 -60 7725 7248 2668 48 6 0 chr5 15790157 15790490 -187295042 + L1PA4 LINE L1 5821 6155 0 2878 217 133 60 chr5 15790490 15790969 -187294563 - L1MC3 LINE L1 -537 7248 6657 2220 198 14 14 chr5 15791052 15791472 -187294060 - MSTC LTR MaLR -6 422 3 3024 284 43 30 chr5 15791473 15792612 -187292920 - L1MCb LINE L1 -4889 1156 3 1280 160 0 5 chr5 15793302 15793515 -187292017 - L1PA15 LINE L1 0 6165 5954 356 286 121 57 chr5 15794499 15794779 -187290753 - L2 LINE L2 -4 3309 3012 * 481 295 0 0 chr5 15794772 15794911 -187290621 - MIR SINE MIR -38 224 86 212 186 17 0 chr5 15795146 15795205 -187290327 + (TA)n Simple_repeat Simple_repeat 2 61 0 329 277 36 9 chr5 15795395 15795507 -187290025 - MIR SINE MIR 0 262 148 26 0 0 0 chr5 15795633 15795659 -187289873 + AT_rich Low_complexity Low_complexity 1 26 0 1038 247 60 60 chr5 15796507 15797037 -187288495 - L1M4 LINE L1 -967 5179 4650 665 279 116 22 chr5 15797099 15797608 -187287924 - L1MEc LINE L1 -4153 2243 1687 13170 252 25 26 chr5 15797643 15799509 -187286023 + L1PB4 LINE L1 1 1868 -4939 2114 103 3 14 chr5 15799509 15799799 -187285733 - AluSx SINE Alu -12 300 14 13170 252 25 26 chr5 15799799 15800265 -187285267 + L1PB4 LINE L1 1868 2333 -4474 5550 28 0 0 chr5 15800265 15800914 -187284618 + L1PA3 LINE L1 5507 6155 0 13170 252 25 26 chr5 15800914 15801026 -187284506 + L1PB4 LINE L1 2333 2444 -4363 2357 157 23 23 chr5 15801026 15801382 -187284150 + MSTA LTR MaLR 1 359 -69 1664 189 18 0 chr5 15801382 15801668 -187283864 - AluJb SINE Alu -16 296 6 2357 157 23 23 chr5 15801668 15801739 -187283793 + MSTA LTR MaLR 358 428 0 13170 252 25 26 chr5 15801739 15802267 -187283265 + L1PB4 LINE L1 2444 2971 -3836 3069 139 12 10 chr5 15802267 15802779 -187282753 + MER75 DNA T2_type 1 513 -1 13170 252 25 26 chr5 15802779 15806069 -187279463 + L1PB4 LINE L1 2971 6807 0 25 75 0 0 chr5 15806073 15806126 -187279406 + AT_rich Low_complexity Low_complexity 1 53 0 465 350 69 41 chr5 15806231 15806341 -187279191 + L1ME3A LINE L1 5282 5387 -783 761 167 0 0 chr5 15806341 15806461 -187279071 + L1PB4 LINE L1 6022 6141 -15 465 350 69 41 chr5 15806461 15806991 -187278541 + L1ME3A LINE L1 5387 5940 -230 26 64 0 0 chr5 15807051 15807098 -187278434 + AT_rich Low_complexity Low_complexity 1 47 0 443 320 57 21 chr5 15807842 15808036 -187277496 + MIR SINE MIR 1 201 -61 1793 90 25 4 chr5 15808356 15808714 -187276818 + AluSc SINE Alu 35 397 0 212 231 15 31 chr5 15809309 15809374 -187276158 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2377 114 0 11 chr5 15809940 15810291 -187275241 - THE1B LTR MaLR -17 347 1 1838 125 25 4 chr5 15810774 15811054 -187274478 - AluSg SINE Alu -24 286 1 25 51 0 0 chr5 15811054 15811093 -187274439 + AT_rich Low_complexity Low_complexity 1 39 0 265 130 0 56 chr5 15811098 15811152 -187274380 - AluSg/x SINE Alu -132 170 120 21 36 0 0 chr5 15811152 15811180 -187274352 + AT_rich Low_complexity Low_complexity 1 28 0 595 24 12 12 chr5 15812492 15812574 -187272958 + (TA)n Simple_repeat Simple_repeat 2 83 0 22 35 0 0 chr5 15812875 15812904 -187272628 + AT_rich Low_complexity Low_complexity 1 29 0 499 299 61 50 chr5 15813025 15813469 -187272063 + HAL1b LINE L1 149 597 -751 267 238 76 121 chr5 15813707 15813831 -187271701 - L2 LINE L2 -12 3301 3190 2043 162 12 0 chr5 15813831 15814164 -187271368 + MER1B DNA MER1_type 1 337 0 267 238 76 121 chr5 15814164 15814262 -187271270 - L2 LINE L2 -123 3190 3089 514 270 0 43 chr5 15814364 15814549 -187270983 - HERVL40 LTR ERVL -4256 1274 1098 1248 101 66 53 chr5 15814701 15814928 -187270604 - MER30 DNA MER1_type 0 230 1 1261 238 13 50 chr5 15815028 15815407 -187270125 - MLT1A1 LTR MaLR 0 365 1 237 330 27 9 chr5 15815482 15815594 -187269938 + LTR16C LTR ERVL 378 491 0 212 162 0 0 chr5 15815988 15816025 -187269507 + (CAA)n Simple_repeat Simple_repeat 2 38 0 683 236 17 28 chr5 15816060 15816238 -187269294 - FRAM SINE Alu 0 176 1 23 33 0 0 chr5 15816396 15816426 -187269106 + AT_rich Low_complexity Low_complexity 1 30 0 32 57 0 0 chr5 15818296 15818349 -187267183 + AT_rich Low_complexity Low_complexity 1 53 0 1799 168 3 0 chr5 15818785 15819070 -187266462 + AluJb SINE Alu 6 291 -21 24 0 0 0 chr5 15819229 15819253 -187266279 + AT_rich Low_complexity Low_complexity 1 24 0 2261 60 42 0 chr5 15819528 15819813 -187265719 + AluY SINE Alu 1 297 -14 27 49 0 0 chr5 15820025 15820066 -187265466 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 15820917 15820940 -187264592 + AT_rich Low_complexity Low_complexity 1 23 0 2213 105 3 0 chr5 15821259 15821564 -187263968 + AluSg1 SINE Alu 1 306 -3 30 0 0 0 chr5 15821854 15821884 -187263648 + AT_rich Low_complexity Low_complexity 1 30 0 2111 124 0 3 chr5 15822041 15822347 -187263185 - AluSx SINE Alu -7 305 1 2592 192 98 32 chr5 15823178 15823872 -187261660 - MER45R DNA AcHobo -1 1580 828 2084 187 57 9 chr5 15823872 15824278 -187261254 - LOR1b LTR ERV1 -2 459 29 257 50 0 25 chr5 15824278 15824318 -187261214 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2084 187 57 9 chr5 15824318 15824349 -187261183 - LOR1b LTR ERV1 -432 29 1 2592 192 98 32 chr5 15824349 15824429 -187261103 - MER45R DNA AcHobo -753 828 755 22 0 0 0 chr5 15824617 15824639 -187260893 + AT_rich Low_complexity Low_complexity 1 22 0 1308 207 17 20 chr5 15824655 15824950 -187260582 - AluJo SINE Alu -18 294 1 296 346 0 44 chr5 15825627 15825763 -187259769 + LTR33 LTR ERVL 17 146 -375 2792 235 88 17 chr5 15825881 15825957 -187259575 - L1M4 LINE L1 -869 5277 5208 1684 181 25 0 chr5 15825957 15826271 -187259261 - L1PA16 LINE L1 0 6166 5845 2792 235 88 17 chr5 15826271 15827177 -187258355 - L1M4 LINE L1 -938 5208 4226 186 133 0 0 chr5 15827204 15827234 -187258298 + (TATG)n Simple_repeat Simple_repeat 1 30 0 492 287 33 0 chr5 15827356 15827478 -187258054 - L1M4 LINE L1 -2022 4124 3999 677 187 0 8 chr5 15827508 15827631 -187257901 - L1PA16 LINE L1 -3 6163 6042 242 183 0 61 chr5 15828799 15828881 -187256651 + (TA)n Simple_repeat Simple_repeat 2 78 0 894 192 78 0 chr5 15828991 15829158 -187256374 - AluJo SINE Alu -132 180 1 241 221 0 35 chr5 15829636 15829722 -187255810 - L1ME3A LINE L1 -194 5976 5894 1986 142 64 6 chr5 15829798 15830142 -187255390 - THE1B LTR MaLR 0 364 1 10269 105 1 2 chr5 15830142 15831723 -187253809 - THE1B-int LTR MaLR 0 1580 1 2388 122 48 20 chr5 15831723 15832077 -187253455 - THE1B LTR MaLR 0 364 1 238 255 51 10 chr5 15832093 15832191 -187253341 - L1ME3A LINE L1 -382 5796 5695 320 349 34 7 chr5 15832213 15832359 -187253173 + LTR16A LTR ERVL 1 150 -300 655 349 49 0 chr5 15832548 15832832 -187252700 + MERVL LTR ERVL 8 305 -4691 411 313 61 15 chr5 15832839 15833037 -187252495 + MERVL LTR ERVL 1693 1899 -3097 287 385 29 10 chr5 15833260 15833465 -187252067 + MERVL LTR ERVL 4738 4946 -539 517 274 75 53 chr5 15833991 15834552 -187250980 - L1ME3A LINE L1 -1319 4827 4255 713 138 9 0 chr5 15834554 15834663 -187250869 - THE1C LTR MaLR 0 375 266 28 29 0 0 chr5 15935256 15935291 -187150241 + AT_rich Low_complexity Low_complexity 1 35 0 186 103 0 0 chr5 15935291 15935320 -187150212 + (TG)n Simple_repeat Simple_repeat 2 30 0 913 62 62 0 chr5 15935587 15935716 -187149816 + L1PA13 LINE L1 6027 6163 0 25 75 0 0 chr5 15935840 15935893 -187149639 + AT_rich Low_complexity Low_complexity 1 53 0 4092 208 32 23 chr5 15937991 15938850 -187146682 + L1MC3 LINE L1 6725 7575 -210 2338 81 7 0 chr5 15938850 15939159 -187146373 + AluY SINE Alu 1 311 0 4092 208 32 23 chr5 15939159 15939223 -187146309 + L1MC3 LINE L1 7575 7637 -148 1224 163 42 102 chr5 15939223 15939584 -187145948 - MER44D DNA MER2_type 0 609 1 4092 208 32 23 chr5 15939584 15939659 -187145873 + L1MC3 LINE L1 7637 7733 -52 630 208 0 11 chr5 15939659 15939795 -187145737 + MLT1A1 LTR MaLR 8 126 -239 522 83 24 0 chr5 15939985 15940069 -187145463 - L1PA13 LINE L1 -147 6016 5931 857 286 22 41 chr5 15940097 15940637 -187144895 - L1ME3A LINE L1 -2369 3777 3254 350 246 51 51 chr5 15940785 15940903 -187144629 + L2 LINE L2 2102 2219 -1095 222 37 0 0 chr5 15941305 15941332 -187144200 + (TG)n Simple_repeat Simple_repeat 2 28 0 220 218 18 0 chr5 15942635 15942690 -187142842 + (CATATA)n Simple_repeat Simple_repeat 6 61 0 338 178 11 33 chr5 15943386 15943476 -187142056 + L1MA8 LINE L1 6200 6287 -4 267 271 67 51 chr5 15943482 15943737 -187141795 + L1M4 LINE L1 4349 4607 -1539 954 101 25 0 chr5 15944009 15944167 -187141365 - HERVL LTR ERVL -147 5507 5346 182 316 40 13 chr5 15944275 15944351 -187141181 - L2 LINE L2 -780 2534 2457 699 210 7 45 chr5 15944413 15944701 -187140831 - MLT1A1 LTR MaLR 0 374 1 31 26 0 0 chr5 15944728 15944766 -187140766 + AT_rich Low_complexity Low_complexity 1 38 0 280 383 93 35 chr5 15944766 15945336 -187140196 - L2 LINE L2 -962 2352 1750 342 143 0 0 chr5 15945448 15945504 -187140028 - MLT2A2 LTR ERVL 0 515 460 265 344 0 0 chr5 15945506 15945631 -187139901 + (CATA)n Simple_repeat Simple_repeat 4 128 0 2987 91 20 2 chr5 15945632 15946038 -187139494 - MLT2A2 LTR ERVL -40 413 1 856 259 87 54 chr5 15946558 15947005 -187138527 - MLT1C LTR MaLR 0 467 6 737 229 18 6 chr5 15948592 15948758 -187136774 - L1MC3 LINE L1 -1218 6567 6400 3767 234 84 17 chr5 15948759 15949162 -187136370 - L1MC3 LINE L1 -748 5398 5024 306 0 0 0 chr5 15949162 15949196 -187136336 + (CA)n Simple_repeat Simple_repeat 2 35 0 3767 234 84 17 chr5 15949196 15950577 -187134955 - L1MC3 LINE L1 -1122 5024 4385 21 0 0 0 chr5 15951788 15951809 -187133723 + AT_rich Low_complexity Low_complexity 1 21 0 2076 117 10 0 chr5 15951862 15952161 -187133371 + AluSp SINE Alu 1 302 -11 213 152 43 0 chr5 15952656 15952702 -187132830 + (TG)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 15953120 15953141 -187132391 + AT_rich Low_complexity Low_complexity 1 21 0 323 334 132 24 chr5 15954054 15954470 -187131062 - L1MC3 LINE L1 -3417 2729 2269 37 62 0 0 chr5 15954633 15954698 -187130834 + AT_rich Low_complexity Low_complexity 1 65 0 247 258 16 0 chr5 15955269 15955331 -187130201 + (TG)n Simple_repeat Simple_repeat 2 64 0 342 0 0 0 chr5 15956109 15956147 -187129385 + (CA)n Simple_repeat Simple_repeat 2 39 0 303 49 0 0 chr5 15956146 15956187 -187129345 + (TC)n Simple_repeat Simple_repeat 1 41 0 * 12905 159 44 8 chr5 15956187 15958512 -187127020 - Tigger1 DNA MER2_type -9 2409 1 486 290 50 35 chr5 15958512 15958795 -187126737 - L1MC4 LINE L1 -134 7908 7622 295 239 34 60 chr5 15959998 15960115 -187125417 + MER104 DNA Tc2 20 133 -47 425 238 50 38 chr5 15961080 15961240 -187124292 + MER46C DNA MER2_type 103 264 -74 24 53 0 0 chr5 15961306 15961344 -187124188 + AT_rich Low_complexity Low_complexity 1 38 0 1835 207 16 8 chr5 15961405 15961792 -187123740 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 15962256 15962277 -187123255 + AT_rich Low_complexity Low_complexity 1 21 0 1948 151 26 32 chr5 15962288 15962665 -187122867 + THE1C LTR MaLR 1 375 0 185 305 0 73 chr5 15963420 15963502 -187122030 - L3 LINE CR1 -617 960 885 674 236 72 29 chr5 15964390 15964737 -187120795 - L1M4 LINE L1 -2598 3548 3187 1097 229 103 0 chr5 15964798 15965069 -187120463 + L1MC3 LINE L1 7027 7325 -460 649 249 5 11 chr5 15965068 15965257 -187120275 + L1MC3 LINE L1 7594 7781 -4 * 2318 124 21 0 chr5 15965294 15965672 -187119860 - L1PA13 LINE L1 -1 6162 5777 959 135 12 5 chr5 15965672 15965832 -187119700 + L1PA13 LINE L1 5607 5754 -409 208 367 65 43 chr5 15966732 15966871 -187118661 + MIR SINE MIR 8 149 -113 1786 258 105 37 chr5 15967162 15967178 -187118354 + L1ME1 LINE L1 4979 4992 -1172 198 118 0 0 chr5 15967178 15967212 -187118320 + (CA)n Simple_repeat Simple_repeat 2 35 0 1786 258 105 37 chr5 15967212 15968280 -187117252 + L1ME1 LINE L1 4992 6152 -12 2048 122 0 34 chr5 15968411 15968732 -187116800 - AluSg SINE Alu 0 310 1 322 262 0 47 chr5 15968931 15969021 -187116511 + T-rich Low_complexity Low_complexity 3 85 -59 1567 112 23 11 chr5 15969021 15969281 -187116251 - L1MA1 LINE L1 0 6302 6040 322 262 0 47 chr5 15969281 15969339 -187116193 + T-rich Low_complexity Low_complexity 85 144 0 1460 196 31 78 chr5 15969484 15969867 -187115665 - MLT1A1 LTR MaLR 0 365 1 2272 70 0 7 chr5 15970883 15971182 -187114350 + AluY SINE Alu 1 297 -14 34 55 0 0 chr5 15972631 15972686 -187112846 + AT_rich Low_complexity Low_complexity 1 55 0 36670 95 10 3 chr5 15974188 15979177 -187106355 - HERVL LTR ERVL -2 5652 626 2591 164 38 10 chr5 15980032 15980539 -187104993 - L1PA16 LINE L1 0 6166 5646 772 216 0 0 chr5 15980558 15980725 -187104807 - L1P LINE L1 -2631 3515 3349 1024 242 0 9 chr5 15981439 15981662 -187103870 - MER58A DNA MER1_type -1 223 3 21 36 0 0 chr5 15982102 15982130 -187103402 + AT_rich Low_complexity Low_complexity 1 28 0 2470 59 0 0 chr5 15982375 15982680 -187102852 - AluY SINE Alu -6 305 1 312 270 117 55 chr5 15982776 15982939 -187102593 - MIR SINE MIR -50 212 40 33 25 0 0 chr5 15983042 15983082 -187102450 + AT_rich Low_complexity Low_complexity 1 40 0 6217 137 36 3 chr5 15983333 15984340 -187101192 + Tigger2 DNA MER2_type 1676 2715 -3 11759 161 41 47 chr5 15988464 15990018 -187095514 + Tigger1 DNA MER2_type 1 1535 -883 2325 93 3 0 chr5 15990018 15990320 -187095212 + AluSx SINE Alu 1 303 -9 11759 161 41 47 chr5 15990320 15991199 -187094333 + Tigger1 DNA MER2_type 1535 2418 0 283 281 153 44 chr5 15991551 15991754 -187093778 - MLT1F LTR MaLR -298 244 20 1744 126 43 22 chr5 15993207 15993484 -187092048 + AluSq SINE Alu 1 283 -30 314 109 36 0 chr5 15993484 15993539 -187091993 + GA-rich Low_complexity Low_complexity 2 58 0 271 289 0 0 chr5 15993548 15993637 -187091895 + (CTGGGG)n Simple_repeat Simple_repeat 1 89 0 24 75 0 0 chr5 15993800 15993840 -187091692 + GC_rich Low_complexity Low_complexity 1 40 0 428 144 29 10 chr5 15994881 15994985 -187090547 + (TA)n Simple_repeat Simple_repeat 2 107 0 181 224 86 17 chr5 15996862 15996920 -187088612 + L2 LINE L2 3192 3253 -60 773 294 163 11 chr5 15997006 15997282 -187088250 - MLT1E2 LTR MaLR -7 619 302 2502 56 3 3 chr5 15997303 15997622 -187087910 + L1PA7 LINE L1 5835 6153 -1 523 228 0 105 chr5 15997779 15997965 -187087567 - MLT1E3 LTR MaLR -306 210 59 233 36 0 0 chr5 15998205 15998233 -187087299 + MSTA LTR MaLR 342 369 -59 388 261 107 102 chr5 15999738 15999954 -187085578 - L2 LINE L2 -1 3312 3092 192 77 0 0 chr5 15999954 15999980 -187085552 + (TG)n Simple_repeat Simple_repeat 2 27 0 388 261 107 102 chr5 15999980 16000146 -187085386 - L2 LINE L2 -221 3092 2928 561 268 98 16 chr5 16000156 16000350 -187085182 + MER63A DNA MER1_type 1 210 0 280 313 16 55 chr5 16000350 16000478 -187085054 - L2 LINE L2 -455 2859 2737 1595 179 152 16 chr5 16001319 16001693 -187083839 + MSTA LTR MaLR 1 425 -3 297 0 0 0 chr5 16002326 16002359 -187083173 + (TG)n Simple_repeat Simple_repeat 1 33 0 1544 186 68 22 chr5 16002466 16002788 -187082744 + MER1B DNA MER1_type 1 337 0 297 197 0 0 chr5 16002798 16002869 -187082663 + CT-rich Low_complexity Low_complexity 1 71 0 381 284 28 37 chr5 16005288 16005397 -187080135 - MLT1E LTR MaLR -441 152 45 379 284 97 94 chr5 16005524 16005866 -187079666 - MLT1E-int LTR MaLR -44 1327 985 317 310 47 35 chr5 16006003 16006174 -187079358 - MLT1E-int LTR MaLR -488 883 711 1042 293 48 6 chr5 16006421 16006888 -187078644 - MLT1E-int LTR MaLR -765 606 1 1776 275 65 27 chr5 16006893 16007449 -187078083 - MLT1E LTR MaLR -7 586 10 22 56 0 0 chr5 16008942 16008978 -187076554 + AT_rich Low_complexity Low_complexity 1 36 0 1232 184 31 0 chr5 16010000 16010223 -187075309 - AluJb SINE Alu -82 230 1 229 239 37 18 chr5 16010670 16010779 -187074753 + (TA)n Simple_repeat Simple_repeat 2 112 0 273 146 0 0 chr5 16010821 16010869 -187074663 + (TG)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 16010919 16010940 -187074592 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 16011016 16011047 -187074485 + AT_rich Low_complexity Low_complexity 1 31 0 1656 130 8 4 chr5 16011787 16012049 -187073483 - L1PA11 LINE L1 -15 6159 5897 353 260 16 16 chr5 16012761 16012884 -187072648 - LTR33 LTR ERVL -7 514 392 4955 235 50 10 chr5 16013856 16015205 -187070327 - L1M1 LINE L1 -5750 1815 22 306 0 0 0 chr5 16015244 16015278 -187070254 + (TA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr5 16015279 16015303 -187070229 + (GA)n Simple_repeat Simple_repeat 1 24 0 273 277 118 30 chr5 16015303 16015599 -187069933 - L1MCc LINE L1 -4620 2502 2181 35 24 0 0 chr5 16015607 16015649 -187069883 + AT_rich Low_complexity Low_complexity 1 42 0 237 122 49 0 chr5 16015658 16015699 -187069833 - L1MA3 LINE L1 -23 6282 6240 1356 274 64 83 chr5 16015711 16017383 -187068149 - L1MCc LINE L1 -4906 1517 365 283 317 94 28 chr5 16017829 16018116 -187067416 - L1MCc LINE L1 -6100 323 18 204 40 0 0 chr5 16018338 16018363 -187067169 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5209 190 49 23 chr5 16018930 16020333 -187065199 - L1MCa LINE L1 -4413 2013 483 258 49 0 0 chr5 16020405 16020446 -187065086 + L1MA3 LINE L1 6265 6305 0 1638 245 55 39 chr5 16020464 16020953 -187064579 - L1MCa LINE L1 -5929 497 1 1092 277 19 60 chr5 16021044 16021474 -187064058 + MER92A LTR ERV1 1 412 0 275 377 29 0 chr5 16021719 16021857 -187063675 - MIR SINE MIR -115 147 6 406 240 10 0 chr5 16022417 16022513 -187063019 - FLAM_C SINE Alu -6 127 31 2289 133 55 38 chr5 16022516 16022739 -187062793 - MSTA LTR MaLR 0 428 193 2210 112 3 13 chr5 16022739 16023051 -187062481 - AluSx SINE Alu -3 309 1 2289 133 55 38 chr5 16023051 16023248 -187062284 - MSTA LTR MaLR -235 193 1 619 183 26 0 chr5 16024336 16024451 -187061081 - L1MC3 LINE L1 -1645 6140 6023 * 1114 215 102 50 chr5 16024444 16025222 -187060310 - L1MC3 LINE L1 -743 5403 4746 280 289 18 0 chr5 16025217 16025331 -187060201 - L1MC3 LINE L1 -1798 4348 4233 * 2076 232 40 8 chr5 16025341 16026000 -187059532 - L1 LINE L1 -2650 3496 2817 1665 161 3 31 chr5 16026018 16026336 -187059196 - AluSx SINE Alu 0 310 1 3344 247 45 47 chr5 16026336 16027531 -187058001 - L1M4 LINE L1 -1489 4657 3461 7606 27 3 7 chr5 16027531 16028877 -187056655 - L1PA4 LINE L1 0 6155 4810 3344 247 45 47 chr5 16028877 16028924 -187056608 - L1M4 LINE L1 -2685 3461 3415 2385 98 0 0 chr5 16028924 16029229 -187056303 + AluSc SINE Alu 3 307 -2 3344 247 45 47 chr5 16029229 16029623 -187055909 - L1M4 LINE L1 -2731 3415 3024 751 320 119 8 chr5 16029616 16029985 -187055547 - L1MCb LINE L1 -5430 615 206 * 5485 136 37 0 chr5 16029990 16030819 -187054713 - HERVL18 LTR ERVL -790 5257 4398 5626 172 1 2 chr5 16030825 16031686 -187053846 - HERVL18 LTR ERVL -2468 3579 2720 1429 137 11 2 chr5 16031685 16031956 -187053576 - HERVL18 LTR ERVL -3595 2452 2119 * 1140 188 17 10 chr5 16031955 16032312 -187053220 - HERVL18 LTR ERVL -4237 1810 1388 * 471 209 0 0 chr5 16032300 16032391 -187053141 - HERVL18 LTR ERVL -5086 961 871 * 3965 219 22 3 chr5 16032389 16033144 -187052388 - HERVL18 LTR ERVL -5277 770 1 713 254 136 55 chr5 16033150 16033480 -187052052 - LTR18A LTR ERVL 0 357 1 1009 269 86 35 chr5 16033619 16034047 -187051485 - MLT1D LTR MaLR -5 500 51 2302 60 7 0 chr5 16035152 16035434 -187050098 - AluY SINE Alu -27 284 1 27 62 0 0 chr5 16035441 16035489 -187050043 + AT_rich Low_complexity Low_complexity 1 48 0 190 385 101 0 chr5 16035877 16035986 -187049546 - L3 LINE CR1 -417 1160 1041 852 234 155 33 chr5 16036499 16036951 -187048581 + Charlie4a DNA MER1_type 1 507 -1 2184 86 16 13 chr5 16036957 16037261 -187048271 + AluY SINE Alu 1 305 -6 4991 186 16 0 chr5 16037467 16038395 -187047137 - L1MC1 LINE L1 -5 6328 5386 263 189 0 0 chr5 16038408 16038461 -187047071 + Tigger1 DNA MER2_type 7 59 -2359 5648 91 23 9 chr5 16038461 16038754 -187046778 - L1PA10 LINE L1 -15 6153 5861 1419 228 48 70 chr5 16038754 16039655 -187045877 - L1MC3 LINE L1 -757 5389 4978 2123 115 3 3 chr5 16039952 16040247 -187045285 - AluSx SINE Alu -17 295 1 352 356 79 50 chr5 16041757 16042400 -187043132 + HERVL LTR ERVL 1454 2115 -3539 699 252 45 36 chr5 16042467 16042796 -187042736 - L1MC3 LINE L1 -1503 4643 4307 382 292 121 38 chr5 16042806 16043121 -187042411 - L1MC3 LINE L1 -2003 4143 3803 894 76 61 0 chr5 16043528 16043659 -187041873 - MER85 DNA T2_type 0 139 1 495 255 26 57 chr5 16044161 16044353 -187041179 + Ricksha DNA DNA 9 194 -3052 * 931 186 89 13 chr5 16044212 16044449 -187041083 - Ricksha DNA DNA -14 3232 2978 2489 154 39 25 chr5 16044449 16044884 -187040648 - Ricksha DNA DNA -1116 2130 1690 871 186 42 7 chr5 16044876 16045075 -187040457 - Ricksha DNA DNA -1899 147 1 * 1012 203 188 32 chr5 16045328 16045732 -187039800 + MLT1C LTR MaLR 1 467 0 306 125 0 0 chr5 16046329 16046377 -187039155 + (A)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr5 16046730 16046780 -187038752 + AT_rich Low_complexity Low_complexity 1 50 0 1407 237 106 3 chr5 16048993 16049351 -187036181 - MSTD LTR MaLR 0 396 2 1408 160 109 37 chr5 16049677 16050027 -187035505 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr5 16050138 16050159 -187035373 + AT_rich Low_complexity Low_complexity 1 21 0 387 313 61 30 chr5 16050518 16050716 -187034816 + MLT1H LTR MaLR 5 208 -341 410 284 15 8 chr5 16051586 16051642 -187033890 - MLT1E3 LTR MaLR 0 624 570 1561 101 4 40 chr5 16051642 16051906 -187033626 + AluSp SINE Alu 65 320 0 410 284 15 8 chr5 16051906 16051982 -187033550 - MLT1E3 LTR MaLR -54 570 490 5485 90 19 3 chr5 16051982 16052728 -187032804 - HERVL LTR ERVL -3248 2406 1649 833 184 74 23 chr5 16053118 16053335 -187032197 - L1ME LINE L1 -614 5548 5321 1732 282 52 16 chr5 16053351 16054180 -187031352 - L1ME LINE L1 -907 5239 4381 332 281 116 14 chr5 16054441 16054587 -187030945 + MLT1H LTR MaLR 382 542 -7 21 0 0 0 chr5 16054918 16054939 -187030593 + AT_rich Low_complexity Low_complexity 1 21 0 185 371 126 0 chr5 16055147 16055314 -187030218 - L2 LINE L2 -672 2642 2455 1884 114 53 23 chr5 16056397 16056696 -187028836 - AluSg SINE Alu 0 310 3 185 196 18 0 chr5 16057026 16057082 -187028450 + CT-rich Low_complexity Low_complexity 2 58 0 23 33 0 0 chr5 16057437 16057467 -187028065 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 16058677 16058708 -187026824 + AT_rich Low_complexity Low_complexity 1 31 0 587 313 100 42 chr5 16058967 16059376 -187026156 - L2 LINE L2 0 3313 2881 48 67 0 0 chr5 16059665 16059755 -187025777 + AT_rich Low_complexity Low_complexity 1 90 0 302 115 19 0 chr5 16059921 16059973 -187025559 + GA-rich Low_complexity Low_complexity 4 56 0 381 58 0 0 chr5 16060494 16060546 -187024986 + (TG)n Simple_repeat Simple_repeat 2 53 0 278 270 95 16 chr5 16061253 16061379 -187024153 + MIR SINE MIR 75 210 -52 1883 27 0 0 chr5 16061527 16061747 -187023785 - L1PA3 LINE L1 -1949 4197 3978 9789 28 8 0 chr5 16061748 16063686 -187021846 + L1PA3 LINE L1 4211 6155 0 3322 156 52 17 chr5 16063686 16064314 -187021218 + L1PB4 LINE L1 5484 6140 -16 1209 283 120 25 chr5 16064423 16065258 -187020274 - L1ME3A LINE L1 -86 6084 5173 860 272 16 10 chr5 16065473 16065785 -187019747 - L1ME3A LINE L1 -1367 4779 4466 22 35 0 0 chr5 16065819 16065848 -187019684 + AT_rich Low_complexity Low_complexity 1 29 0 1042 207 82 28 chr5 16065863 16066159 -187019373 - L1MB8 LINE L1 -12 6166 5848 271 344 48 0 chr5 16066862 16066987 -187018545 + L2 LINE L2 3179 3309 -4 22 0 0 0 chr5 16067353 16067375 -187018157 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 16067870 16067895 -187017637 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 16068667 16068688 -187016844 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 16068927 16068950 -187016582 + (A)n Simple_repeat Simple_repeat 1 23 0 362 341 114 26 chr5 16069684 16069992 -187015540 + MLT1I LTR MaLR 1 335 -74 25 0 0 0 chr5 16070138 16070163 -187015369 + AT_rich Low_complexity Low_complexity 1 25 0 528 190 72 138 chr5 16070478 16070606 -187014926 + MER20 DNA MER1_type 38 150 -69 477 0 0 0 chr5 16070606 16070659 -187014873 + (CA)n Simple_repeat Simple_repeat 1 53 0 528 190 72 138 chr5 16070659 16070725 -187014807 + MER20 DNA MER1_type 150 219 0 1868 112 42 14 chr5 16071016 16071303 -187014229 + AluSx SINE Alu 1 295 -17 305 375 33 25 chr5 16071727 16071970 -187013562 - L2 LINE L2 -869 2445 2201 * 707 284 28 14 chr5 16071962 16072180 -187013352 - MIR SINE MIR -2 260 40 1484 242 14 16 chr5 16072746 16073110 -187012422 - MLT1A1 LTR MaLR -2 363 1 21 36 0 0 chr5 16073158 16073186 -187012346 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 16073867 16073914 -187011618 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 284 204 0 chr5 16076186 16076274 -187009258 - L2 LINE L2 0 3313 3208 245 167 15 76 chr5 16076466 16076532 -187009000 - L1MCa LINE L1 -5720 844 783 204 231 19 0 chr5 16076615 16076667 -187008865 + T-rich Low_complexity Low_complexity 2 54 0 1244 264 82 23 chr5 16076670 16077185 -187008347 - L1MCa LINE L1 -5493 552 8 7547 202 41 5 chr5 16078637 16081259 -187004273 + L1PA16 LINE L1 3437 6153 -13 51 0 0 0 chr5 16081259 16081310 -187004222 + AT_rich Low_complexity Low_complexity 1 51 0 221 270 10 0 chr5 16081650 16081750 -187003782 + GA-rich Low_complexity Low_complexity 4 104 0 1983 261 83 26 chr5 16081783 16082638 -187002894 - L1M4 LINE L1 -5034 1821 908 231 205 154 0 chr5 16082650 16082728 -187002804 - L1M4 LINE L1 -6664 195 106 543 280 143 19 chr5 16082837 16083376 -187002156 + L1M4 LINE L1 3898 4503 -1643 5317 118 2 2 chr5 16083410 16085015 -187000517 - L1PA13 LINE L1 -4 6159 4533 10586 209 44 22 chr5 16085126 16088387 -186997145 + L1M1 LINE L1 2233 5562 -743 455 144 89 0 chr5 16088547 16088637 -186996895 + MER4A LTR ERV1 1 98 -566 1518 134 22 76 chr5 16088637 16089002 -186996530 + MER4A LTR ERV1 261 664 0 226 156 22 0 chr5 16089187 16089232 -186996300 - MLT2B1 LTR ERVL 0 464 419 1278 213 94 2 chr5 16089313 16089686 -186995846 - MLT2B1 LTR ERVL -56 459 1 1485 188 0 17 chr5 16089793 16090091 -186995441 - MER4A LTR ERV1 0 664 372 406 125 42 31 chr5 16090140 16090236 -186995296 - MER4A LTR ERV1 -567 97 1 353 293 78 53 chr5 16090313 16090596 -186994936 + L1M4 LINE L1 3086 3375 -2771 1768 135 55 50 chr5 16091843 16092205 -186993327 - THE1B LTR MaLR 0 364 1 11797 102 4 0 chr5 16092205 16093779 -186991753 - THE1B-int LTR MaLR 0 1580 1 1741 138 92 43 chr5 16093779 16094126 -186991406 - THE1B LTR MaLR 0 364 1 315 209 0 30 chr5 16094301 16094368 -186991164 + MER50 LTR ERV1 11 75 -659 2057 207 49 6 chr5 16094483 16094994 -186990538 + MER50 LTR ERV1 202 734 0 324 291 68 19 chr5 16095738 16095841 -186989691 - MIR SINE MIR -122 140 33 253 315 117 5 chr5 16096539 16096752 -186988780 - MLT1I-int LTR MaLR -850 521 285 1592 178 36 0 chr5 16097105 16097380 -186988152 - AluJb SINE Alu -17 295 11 1983 183 57 20 chr5 16097785 16098245 -186987287 + LTR9B LTR ERV1 7 483 -161 189 0 0 0 chr5 16098964 16098985 -186986547 + (TA)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr5 16099523 16099545 -186985987 + AT_rich Low_complexity Low_complexity 1 22 0 1881 147 77 14 chr5 16100800 16101153 -186984379 + THE1C LTR MaLR 1 375 0 391 210 1 10 chr5 16101170 16101269 -186984263 - MLT1I LTR MaLR -3 421 317 200 208 0 57 chr5 16101730 16101783 -186983749 + A-rich Low_complexity Low_complexity 4 53 0 21 0 0 0 chr5 16101809 16101830 -186983702 + AT_rich Low_complexity Low_complexity 1 21 0 385 274 76 61 chr5 16102034 16102231 -186983301 + MIR SINE MIR 63 262 0 1562 194 7 10 chr5 16102309 16102598 -186982934 - AluJb SINE Alu -23 289 2 27 0 0 0 chr5 16102598 16102625 -186982907 + AT_rich Low_complexity Low_complexity 1 27 0 1285 225 10 40 chr5 16102699 16103001 -186982531 - AluJb SINE Alu -15 297 5 506 245 22 14 chr5 16103010 16103149 -186982383 - FLAM_C SINE Alu -3 140 1 1523 187 3 10 chr5 16103213 16103502 -186982030 + AluJb SINE Alu 13 299 -13 1122 249 52 33 chr5 16103655 16104020 -186981512 - MLT1A2 LTR MaLR -2 372 1 1365 196 66 0 chr5 16104080 16104381 -186981151 + L1MA9 LINE L1 5468 5788 -503 2409 168 46 5 chr5 16104387 16104798 -186980734 - MSTA LTR MaLR 0 428 1 293 222 0 14 chr5 16104798 16104870 -186980662 - MSTA-int LTR MaLR 0 1651 1581 8044 193 16 23 chr5 16104876 16106513 -186979019 - MSTA-int LTR MaLR -24 1627 2 2059 199 49 2 chr5 16106522 16106929 -186978603 - MSTA LTR MaLR -2 426 1 2011 185 27 35 chr5 16106943 16107457 -186978075 + L1MA9 LINE L1 5803 6312 0 217 358 0 0 chr5 16107793 16107860 -186977672 - L2 LINE L2 -84 3188 3122 45 79 0 0 chr5 16109936 16110037 -186975495 + AT_rich Low_complexity Low_complexity 1 101 0 4656 153 42 25 chr5 16110560 16111448 -186974084 - MER4D LTR ERV1 0 903 1 1236 240 121 37 chr5 16112776 16113142 -186972390 + MER90 LTR ERV1 1 424 -151 1853 178 7 0 chr5 16113142 16113446 -186972086 + AluSx SINE Alu 1 306 -6 1236 240 121 37 chr5 16113446 16113592 -186971940 + MER90 LTR ERV1 424 556 -19 353 212 18 26 chr5 16113601 16113714 -186971818 + Charlie1a DNA MER1_type 69 180 -1275 1345 95 16 33 chr5 16113833 16114075 -186971457 + L1MA1 LINE L1 6064 6301 -1 954 208 14 0 chr5 16114087 16114299 -186971233 - L1MD3 LINE L1 -52 7943 7729 551 172 20 0 chr5 16114915 16115014 -186970518 + FLAM_C SINE Alu 13 113 -30 622 150 158 8 chr5 16116494 16116621 -186968911 + MSTA LTR MaLR 283 428 0 234 234 78 0 chr5 16116764 16116841 -186968691 - Charlie8 DNA MER1_type -989 1428 1346 * 257 257 32 53 chr5 16116840 16117059 -186968473 - Charlie8 DNA MER1_type -2116 301 26 1758 113 3 42 chr5 16117094 16117404 -186968128 - AluSx SINE Alu -10 302 5 806 127 54 95 chr5 16117456 16117771 -186967761 + L1PA14 LINE L1 5770 6071 -90 640 250 44 40 chr5 16117939 16118187 -186967345 - LTR10D LTR ERV1 -145 368 120 237 283 0 0 chr5 16118541 16118594 -186966938 + MER5A DNA MER1_type 1 53 -136 264 178 0 0 chr5 16119131 16119176 -186966356 - Alu SINE Alu -254 45 1 261 343 86 0 chr5 16119180 16119285 -186966247 - MIR SINE MIR -59 149 36 1837 169 23 7 chr5 16119325 16119632 -186965900 + AluJo SINE Alu 1 312 0 1822 146 7 14 chr5 16119654 16119970 -186965562 - AluSx SINE Alu 0 314 1 752 206 88 21 chr5 16120024 16120218 -186965314 + MER20 DNA MER1_type 13 219 0 1393 52 0 0 chr5 16120287 16120461 -186965071 + THE1B LTR MaLR 1 174 -190 2201 126 3 7 chr5 16120780 16121089 -186964443 - AluSg SINE Alu -2 308 1 1943 238 65 22 chr5 16121144 16121698 -186963834 - MLT1E LTR MaLR -4 589 12 868 127 169 0 chr5 16121884 16122050 -186963482 - MSTA LTR MaLR -232 196 3 234 91 0 0 chr5 16122081 16122114 -186963418 + (A)n Simple_repeat Simple_repeat 1 33 0 1482 123 46 42 chr5 16122256 16122516 -186963016 - THE1B LTR MaLR 0 364 104 347 82 0 0 chr5 16122510 16122559 -186962973 - AluSq SINE Alu -121 182 134 * 722 182 0 0 chr5 16122559 16122691 -186962841 - AluJo/FLAM SINE Alu -170 132 1 510 301 101 37 chr5 16122808 16123183 -186962349 + LTR33 LTR ERVL 1 399 -122 231 198 83 62 chr5 16124715 16124811 -186960721 - MIR3 SINE MIR -48 160 63 2116 154 23 5 chr5 16125743 16126140 -186959392 + MSTA-int LTR MaLR 1248 1651 0 492 173 19 10 chr5 16126140 16126244 -186959288 + MSTA LTR MaLR 1 105 -323 299 286 125 5 chr5 16126347 16126571 -186958961 - MER113 DNA MER1_type? -107 414 164 2236 96 0 0 chr5 16126598 16126928 -186958604 - AluSq SINE Alu 0 331 2 990 188 0 0 chr5 16126963 16127128 -186958404 + AluJb SINE Alu 132 296 -16 1200 174 100 22 chr5 16127128 16127398 -186958134 - L1MB8 LINE L1 -124 6054 5764 23 0 0 0 chr5 16128011 16128034 -186957498 + AT_rich Low_complexity Low_complexity 1 23 0 271 367 54 0 chr5 16129070 16129217 -186956315 + L2 LINE L2 2797 2951 -363 327 325 56 6 chr5 16130097 16130257 -186955275 + L1MC4a LINE L1 5591 5758 -2050 262 211 130 32 chr5 16130266 16130389 -186955143 + L1MC4a LINE L1 5785 5919 -1889 1306 248 98 19 chr5 16130621 16131287 -186954245 - Looper DNA T2_type -805 753 36 270 314 16 0 chr5 16131855 16131976 -186953556 + L1MEd LINE L1 596 718 -5401 2089 241 76 105 chr5 16132014 16133139 -186952393 - MER52A LTR ERV1 0 1755 664 621 305 87 40 chr5 16133147 16133550 -186951982 + L1MEd LINE L1 755 1176 -4943 343 317 38 11 chr5 16134064 16134247 -186951285 + L1MEd LINE L1 2455 2642 -3487 361 268 67 6 chr5 16134417 16134581 -186950951 + L1MEd LINE L1 2866 3039 -3090 1364 243 56 12 chr5 16134887 16135747 -186949785 + Charlie1 DNA MER1_type 1645 2601 -160 2100 130 140 13 chr5 16135763 16136141 -186949391 - MSTA LTR MaLR 0 428 3 8140 209 35 3 chr5 16136148 16137742 -186947790 - MSTA-int LTR MaLR -6 1645 1 1624 155 160 37 chr5 16137742 16138123 -186947409 - MSTA LTR MaLR 0 428 1 260 257 73 15 chr5 16138156 16138292 -186947240 + Charlie1 DNA MER1_type 2618 2761 0 5197 141 104 36 chr5 16138549 16139732 -186945800 - MER11A LTR ERVK 0 1266 4 6833 75 4 0 chr5 16140054 16141495 -186944037 - L1PA8 LINE L1 -7 6165 4726 30 27 0 0 chr5 16141526 16141563 -186943969 + AT_rich Low_complexity Low_complexity 1 37 0 284 209 0 30 chr5 16145786 16145853 -186939679 - MIR SINE MIR -70 192 128 199 308 0 0 chr5 16146089 16146141 -186939391 + MIR SINE MIR 3 54 -208 256 131 66 0 chr5 16146158 16146219 -186939313 + MER41B LTR ERV1 481 545 -90 1718 237 109 31 chr5 16146935 16147708 -186937824 + Looper DNA T2_type 19 851 -707 427 228 22 52 chr5 16148496 16148632 -186936900 - LTR45 LTR ERV1 0 525 394 1945 217 80 5 chr5 16148772 16149196 -186936336 + LTR32 LTR ERVL 16 471 0 1192 91 0 0 chr5 16150026 16150191 -186935341 - L1PA8 LINE L1 -5 6167 6003 362 316 84 10 chr5 16150480 16150696 -186934836 + MIR SINE MIR 19 250 -12 2068 134 3 0 chr5 16151258 16151557 -186933975 + AluSq SINE Alu 1 300 -13 2097 124 7 3 chr5 16151782 16152080 -186933452 + AluSx SINE Alu 1 299 -13 436 242 121 16 chr5 16153463 16153587 -186931945 - MIR SINE MIR -125 137 1 198 279 48 77 chr5 16153587 16153639 -186931893 + MIR SINE MIR 154 202 -60 38 51 0 0 chr5 16154647 16154706 -186930826 + AT_rich Low_complexity Low_complexity 1 59 0 12428 199 42 16 chr5 16154707 16158829 -186926703 + L1MA6 LINE L1 2747 6999 -3 1012 171 25 75 chr5 16159324 16159563 -186925969 + L1M2 LINE L1 5533 5759 -541 5865 255 30 22 chr5 16159583 16161554 -186923978 + L1MC1 LINE L1 2879 4866 -1280 2479 189 17 11 chr5 16161561 16162081 -186923451 + L1MC1 LINE L1 5800 6322 -11 26 50 0 0 chr5 16162183 16162223 -186923309 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 16162351 16162373 -186923159 + AT_rich Low_complexity Low_complexity 1 22 0 1033 164 0 38 chr5 16162780 16162963 -186922569 - AluJo SINE Alu -17 295 120 712 199 8 0 chr5 16162997 16163128 -186922404 - AluJo SINE Alu -170 132 1 3512 148 2 2 chr5 16165582 16166109 -186919423 + MER1A DNA MER1_type 1 527 0 475 333 41 52 chr5 16166112 16166499 -186919033 + L1ME3A LINE L1 662 1044 -5352 253 294 28 35 chr5 16166602 16166745 -186918787 + L1ME3A LINE L1 2731 2872 -3343 1674 283 64 30 chr5 16166989 16167554 -186917978 - MLT1E LTR MaLR -9 584 1 757 298 104 53 chr5 16167566 16167697 -186917835 + LTR33 LTR ERVL 26 149 -372 2190 117 0 0 chr5 16167697 16167995 -186917537 + AluSx SINE Alu 15 312 0 757 298 104 53 chr5 16167995 16168333 -186917199 + LTR33 LTR ERVL 149 519 -2 478 258 66 59 chr5 16168353 16168640 -186916892 + L1ME3A LINE L1 3947 4235 -1980 26 0 0 0 chr5 16168773 16168799 -186916733 + AT_rich Low_complexity Low_complexity 1 26 0 228 182 0 0 chr5 16168857 16168901 -186916631 + L1ME3A LINE L1 4637 4680 -1535 446 278 115 36 chr5 16168976 16169394 -186916138 + L1ME3A LINE L1 4702 5152 -1063 1779 284 71 24 chr5 16169498 16169661 -186915871 + L1ME3A LINE L1 5324 5478 -761 2071 115 7 0 chr5 16169661 16169956 -186915576 + AluY SINE Alu 1 297 -14 1779 284 71 24 chr5 16169956 16170454 -186915078 + L1ME3A LINE L1 5478 6037 -202 261 0 0 0 chr5 16170454 16170483 -186915049 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1779 284 71 24 chr5 16170483 16170683 -186914849 + L1ME3A LINE L1 6037 6226 -13 383 316 113 39 chr5 16170694 16171029 -186914503 + L1MC3 LINE L1 5480 5839 -1946 29 28 0 0 chr5 16174094 16174130 -186911402 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 16174212 16174234 -186911298 + AT_rich Low_complexity Low_complexity 1 22 0 2521 153 2 5 chr5 16176333 16176738 -186908794 + MSTB-int LTR MaLR 1248 1651 0 927 219 55 48 chr5 16176738 16177030 -186908502 + MSTB LTR MaLR 1 294 -132 322 372 11 27 chr5 16177312 16177495 -186908037 + MER5A DNA MER1_type 7 186 -3 290 276 98 57 chr5 16177907 16178084 -186907448 - MIR3 SINE MIR -62 200 14 29 28 0 0 chr5 16178287 16178323 -186907209 + AT_rich Low_complexity Low_complexity 1 36 0 5007 67 6 0 chr5 16178424 16179078 -186906454 + L1PA7 LINE L1 5497 6154 0 296 219 0 0 chr5 16179489 16179553 -186905979 + MLT1A2 LTR MaLR 309 372 -2 315 0 0 0 chr5 16179716 16179751 -186905781 + (TG)n Simple_repeat Simple_repeat 2 36 0 2639 113 0 3 chr5 16180615 16180987 -186904545 + THE1C LTR MaLR 5 375 0 21 36 0 0 chr5 16181585 16181613 -186903919 + AT_rich Low_complexity Low_complexity 1 28 0 249 172 0 0 chr5 16182463 16182527 -186903005 + (TA)n Simple_repeat Simple_repeat 1 64 0 685 258 31 0 chr5 16183323 16183486 -186902046 - MER5A DNA MER1_type -6 183 16 399 138 11 32 chr5 16183993 16184087 -186901445 + GA-rich Low_complexity Low_complexity 2 93 0 676 282 7 0 chr5 16184177 16184326 -186901206 + MER45A DNA AcHobo 1 150 -28 1734 174 7 0 chr5 16185406 16185700 -186899832 - AluSx SINE Alu -14 298 3 388 347 67 0 chr5 16185829 16186022 -186899510 + MIR SINE MIR 31 236 -26 225 381 36 0 chr5 16186368 16186507 -186899025 - MIR3 SINE MIR -18 190 47 300 301 11 0 chr5 16187053 16187146 -186898386 + (TA)n Simple_repeat Simple_repeat 2 95 0 34 42 0 0 chr5 16187184 16187232 -186898300 + AT_rich Low_complexity Low_complexity 1 48 0 297 362 38 48 chr5 16187569 16187859 -186897673 + L2 LINE L2 2665 2950 -363 688 289 111 14 chr5 16188762 16189112 -186896420 + L1MC4a LINE L1 5591 5974 -1834 25 51 0 0 chr5 16189133 16189172 -186896360 + AT_rich Low_complexity Low_complexity 1 39 0 6565 79 14 0 chr5 16189320 16190632 -186894900 + L1PA8 LINE L1 4838 6169 -3 2886 202 66 28 chr5 16190756 16192277 -186893255 - L1MA9 LINE L1 -10 6302 4548 417 291 10 15 chr5 16192257 16192463 -186893069 + L1 LINE L1 3024 3228 -4337 * 5153 188 15 19 chr5 16192465 16193181 -186892351 + L1 LINE L1 4873 5585 -1980 2269 101 0 3 chr5 16193181 16193489 -186892043 + AluY SINE Alu 1 307 -4 5153 188 15 19 chr5 16193489 16193892 -186891640 + L1 LINE L1 5585 5988 -1577 1983 143 3 3 chr5 16193900 16194201 -186891331 - AluSq SINE Alu -12 301 1 4970 71 27 1 chr5 16195153 16195830 -186889702 + L1PA8 LINE L1 5465 6158 -14 2990 227 72 38 chr5 16196005 16196911 -186888621 - Charlie1 DNA MER1_type -199 2562 1626 2101 131 3 10 chr5 16197482 16197796 -186887736 - AluSx SINE Alu 0 312 1 25 31 0 0 chr5 16199312 16199344 -186886188 + AT_rich Low_complexity Low_complexity 1 32 0 202 203 43 14 chr5 16199808 16199877 -186885655 + (AAATG)n Simple_repeat Simple_repeat 4 74 0 811 221 169 66 chr5 16200157 16200515 -186885017 + MER50 LTR ERV1 10 439 -295 3189 111 47 12 chr5 16200515 16201009 -186884523 - MER9 LTR ERVK 0 511 1 811 221 169 66 chr5 16201009 16201166 -186884366 + MER50 LTR ERV1 439 578 -156 4337 31 4 0 chr5 16201207 16201725 -186883807 - L1PA3 LINE L1 0 6155 5636 4744 18 0 5 chr5 16201725 16202511 -186883021 + L1PA3 LINE L1 4825 5608 -547 852 204 0 0 chr5 16202512 16202674 -186882858 + MER50 LTR ERV1 573 734 0 2338 178 18 7 chr5 16202876 16203332 -186882200 + LOR1b LTR ERV1 1 461 0 22 56 0 0 chr5 16203442 16203478 -186882054 + AT_rich Low_complexity Low_complexity 1 36 0 307 336 18 0 chr5 16204004 16204117 -186881415 + (TG)n Simple_repeat Simple_repeat 2 116 0 1965 193 49 27 chr5 16204230 16204580 -186880952 - LOR1b LTR ERV1 -1 460 96 1966 140 3 0 chr5 16204580 16204873 -186880659 + AluSx SINE Alu 17 310 -2 1965 193 49 27 chr5 16204873 16204972 -186880560 - LOR1b LTR ERV1 -365 96 1 3389 21 9 17 chr5 16205311 16205730 -186879802 - L1PA3 LINE L1 -3 6152 5737 1869 202 77 7 chr5 16207740 16208155 -186877377 + MSTB2 LTR MaLR 14 457 0 207 0 0 0 chr5 16209377 16209400 -186876132 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr5 16209673 16209698 -186875834 + (TG)n Simple_repeat Simple_repeat 2 26 0 349 327 119 0 chr5 16210732 16210891 -186874641 - MIR SINE MIR 0 262 85 250 376 12 0 chr5 16211094 16211179 -186874353 + MLT1I LTR MaLR 223 308 -101 502 272 89 103 chr5 16211285 16211722 -186873810 - LTR16A LTR ERVL -3 447 17 523 338 40 15 chr5 16212047 16212248 -186873284 - LTR16A LTR ERVL -162 288 83 13832 74 6 3 chr5 16212331 16214112 -186871420 - HERVL-A1 LTR ERVL -3867 1787 1 2823 101 47 7 chr5 16214112 16214152 -186871380 - MLT2A1 LTR ERVL 0 444 407 486 88 0 0 chr5 16214152 16214220 -186871312 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 2823 101 47 7 chr5 16214220 16214606 -186870926 - MLT2A1 LTR ERVL -37 407 1 225 0 0 0 chr5 16215302 16215327 -186870205 + (TG)n Simple_repeat Simple_repeat 2 26 0 213 269 0 11 chr5 16215857 16215950 -186869582 + T-rich Low_complexity Low_complexity 5 96 0 8350 121 12 7 chr5 16216071 16217377 -186868155 - L1PA8A LINE L1 -1205 4941 3629 6156 95 3 1 chr5 16217377 16218557 -186866975 + L1PA8A LINE L1 4949 6127 -4 215 227 34 11 chr5 16218560 16218648 -186866884 + (TA)n Simple_repeat Simple_repeat 2 91 0 306 0 0 0 chr5 16218665 16218699 -186866833 + (TA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 16219389 16219417 -186866115 + AT_rich Low_complexity Low_complexity 1 28 0 2301 92 7 0 chr5 16220265 16220571 -186864961 - AluSq SINE Alu -5 308 1 250 254 0 0 chr5 16220807 16220862 -186864670 + MLT1J LTR MaLR 110 164 -347 1987 97 0 71 chr5 16220981 16221292 -186864240 + AluSx SINE Alu 1 289 -23 262 239 28 0 chr5 16221517 16221588 -186863944 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 324 342 10 1 chr5 16221603 16221726 -186863806 + MIR SINE MIR 21 143 -65 2070 134 7 0 chr5 16222826 16223132 -186862400 - AluSc SINE Alu -1 308 1 2378 75 0 0 chr5 16223213 16223505 -186862027 + AluY SINE Alu 1 292 -19 339 150 0 0 chr5 16224048 16224108 -186861424 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 1221 212 43 11 chr5 16224367 16224645 -186860887 + MER90 LTR ERV1 328 614 0 3055 252 55 77 chr5 16225503 16226387 -186859145 - L1M4 LINE L1 -1328 4818 3991 314 22 0 65 chr5 16226387 16226433 -186859099 - L1PA12 LINE L1 -10 6158 6116 3055 252 55 77 chr5 16226433 16227302 -186858230 - L1M4 LINE L1 -2155 3991 3104 226 222 111 0 chr5 16228547 16228610 -186856922 + L1ME LINE L1 5675 5744 -377 183 318 11 80 chr5 16228848 16228936 -186856596 + L2 LINE L2 3181 3262 -10 22 0 0 0 chr5 16229037 16229059 -186856473 + AT_rich Low_complexity Low_complexity 1 22 0 225 286 32 0 chr5 16229920 16229983 -186855549 - L2 LINE L2 -7 3306 3242 369 0 0 0 chr5 16230072 16230087 -186855445 + (TG)n Simple_repeat Simple_repeat 1 56 0 369 0 0 0 chr5 16230087 16230128 -186855404 + (TG)n Simple_repeat Simple_repeat 2 42 0 2425 160 2 5 chr5 16230234 16230634 -186854898 - Tigger2 DNA MER2_type -53 2665 2267 360 246 0 0 chr5 16230618 16230687 -186854845 - Tigger2 DNA MER2_type -2649 69 1 * 373 338 113 42 chr5 16230723 16231102 -186854430 - L2 LINE L2 -2071 1243 838 1549 179 71 15 chr5 16232808 16233132 -186852400 - L1M3 LINE L1 -524 5810 5469 * 1648 182 119 7 chr5 16233130 16233543 -186851989 + L1MA10 LINE L1 5873 6331 -3 691 295 48 0 chr5 16233591 16233798 -186851734 + MIR SINE MIR 15 231 -31 832 251 4 39 chr5 16234013 16234244 -186851288 - MER58A DNA MER1_type -1 223 1 225 263 0 0 chr5 16235809 16235866 -186849666 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 538 287 113 12 chr5 16236741 16236943 -186848589 + MER5C DNA MER1_type 1 234 -90 3755 171 24 19 chr5 16236943 16237698 -186847834 - L1MA9 LINE L1 -13 6299 5541 538 287 113 12 chr5 16237698 16237742 -186847790 + MER5C DNA MER1_type 234 272 -52 318 67 0 0 chr5 16237746 16237791 -186847741 + (CA)n Simple_repeat Simple_repeat 1 45 0 366 42 0 0 chr5 16238602 16238650 -186846882 + (CA)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 16238913 16238935 -186846597 + AT_rich Low_complexity Low_complexity 1 22 0 582 78 0 0 chr5 16239451 16239528 -186846004 + MADE1 DNA Mariner 1 77 -3 180 77 0 0 chr5 16240323 16240349 -186845183 + (CACCAT)n Simple_repeat Simple_repeat 2 27 0 25 90 0 0 chr5 16240922 16240989 -186844543 + AT_rich Low_complexity Low_complexity 1 67 0 589 302 94 47 chr5 16241798 16242182 -186843350 + MLT1I LTR MaLR 8 409 0 335 195 0 58 chr5 16243969 16244056 -186841476 - MER53 DNA DNA -85 104 23 * 402 178 0 56 chr5 16243978 16244068 -186841464 + MER53 DNA DNA 105 189 0 250 320 88 7 chr5 16245564 16245711 -186839821 - MIR SINE MIR -57 205 47 881 232 45 114 chr5 16245887 16245984 -186839548 + MLT1A1 LTR MaLR 3 105 -321 3136 166 103 3 chr5 16245984 16246636 -186838896 + LTR62 LTR ERVK 1 717 -2 881 232 45 114 chr5 16246636 16246931 -186838601 + MLT1A1 LTR MaLR 105 426 0 300 371 53 50 chr5 16246957 16247294 -186838238 + L2 LINE L2 2480 2817 -497 304 77 39 0 chr5 16247378 16247430 -186838102 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 205 148 19 19 chr5 16247573 16247627 -186837905 + CT-rich Low_complexity Low_complexity 4 57 0 1679 171 52 3 chr5 16247925 16248253 -186837279 - L1PB4 LINE L1 0 6156 5813 514 292 67 54 chr5 16248380 16248678 -186836854 - MLT1I LTR MaLR -29 380 79 285 272 37 12 chr5 16248831 16248912 -186836620 + L2 LINE L2 3186 3268 -4 288 91 0 0 chr5 16251008 16251052 -186834480 + (CA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 16251126 16251147 -186834385 + AT_rich Low_complexity Low_complexity 1 21 0 403 301 82 0 chr5 16253458 16253604 -186831928 + LTR16C LTR ERVL 108 265 -226 849 260 18 18 chr5 16253608 16253835 -186831697 - AluJo SINE Alu -16 296 70 2230 148 41 24 chr5 16256249 16256668 -186828864 - MSTA LTR MaLR -2 426 1 628 316 92 25 chr5 16257289 16257647 -186827885 - MLT1K LTR MaLR -27 561 180 288 0 0 0 chr5 16257647 16257679 -186827853 + (T)n Simple_repeat Simple_repeat 1 32 0 930 247 37 15 chr5 16258305 16258633 -186826899 - LTR37A LTR ERV1 -3 423 89 308 268 76 0 chr5 16260099 16260265 -186825267 + L1P LINE L1 3739 3920 -2226 376 61 0 0 chr5 16260375 16260424 -186825108 + MLT2A1 LTR ERVL 1 49 -404 1550 104 0 9 chr5 16260425 16260646 -186824886 + MLT2A1 LTR ERVL 219 437 -7 41269 84 23 7 chr5 16260647 16266209 -186819323 + HERVL-A1-A1 LTR ERVL 1 5654 0 2918 90 0 5 chr5 16266209 16266597 -186818935 + MLT2A1 LTR ERVL 1 386 -58 1616 143 122 31 chr5 16266597 16266918 -186818614 - THE1B LTR MaLR 0 364 15 10894 103 13 2 chr5 16266920 16268483 -186817049 - THE1B-int LTR MaLR 0 1580 1 503 109 0 87 chr5 16268483 16268575 -186816957 - THE1B LTR MaLR 0 355 272 252 121 61 91 chr5 16268573 16268639 -186816893 + MLT2A1 LTR ERVL 390 453 0 * 586 304 185 14 chr5 16268717 16269138 -186816394 - L1M4 LINE L1 -1540 4606 4114 450 174 37 9 chr5 16269176 16269285 -186816247 - L1MB7 LINE L1 0 6184 6073 459 283 60 46 chr5 16269292 16269436 -186816096 + L1ME LINE L1 5129 5270 -900 1935 153 27 0 chr5 16269436 16269731 -186815801 + AluSx SINE Alu 1 303 -9 459 283 60 46 chr5 16269731 16269934 -186815598 + L1ME LINE L1 5270 5481 -689 256 188 145 42 chr5 16270109 16270240 -186815292 + L1ME LINE L1 5725 5865 -305 211 345 25 50 chr5 16270534 16270653 -186814879 - MIR3 SINE MIR -84 124 9 231 227 0 15 chr5 16271639 16271705 -186813827 + L1MC4 LINE L1 7965 8029 -13 526 282 129 37 chr5 16271787 16272297 -186813235 - L1MC4 LINE L1 -412 7630 7074 26 50 0 0 chr5 16272687 16272727 -186812805 + AT_rich Low_complexity Low_complexity 1 40 0 2411 161 25 0 chr5 16273120 16273566 -186811966 + L1MA4 LINE L1 5838 6294 -6 236 318 123 53 chr5 16273736 16273906 -186811626 - MIR SINE MIR -47 215 34 4566 19 0 2 chr5 16274949 16275526 -186810006 + L1PA2 LINE L1 5619 6194 0 21 0 0 0 chr5 16276729 16276750 -186808782 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 16276942 16276970 -186808562 + AT_rich Low_complexity Low_complexity 1 28 0 270 374 62 65 chr5 16278305 16278658 -186806874 - L2 LINE L2 -5 3267 2916 222 321 101 34 chr5 16278705 16278942 -186806590 + L2 LINE L2 1472 1724 -1590 261 370 47 30 chr5 16278947 16279182 -186806350 - L2 LINE L2 -527 2787 2549 219 69 0 0 chr5 16279771 16279800 -186805732 + (CA)n Simple_repeat Simple_repeat 2 30 0 191 257 59 69 chr5 16279959 16280060 -186805472 + MIR3 SINE MIR 109 208 0 565 286 132 12 chr5 16280212 16280586 -186804946 - LTR16C LTR ERVL -10 481 33 249 196 0 0 chr5 16281711 16281762 -186803770 + (TG)n Simple_repeat Simple_repeat 1 51 0 303 326 0 22 chr5 16281762 16281854 -186803678 - L1MC4 LINE L1 -1340 6702 6613 305 143 111 0 chr5 16281777 16281840 -186803692 + L1MCa LINE L1 1995 2064 -4362 1309 238 79 9 chr5 16281898 16282239 -186803293 + MLT1A1 LTR MaLR 1 365 0 6545 210 83 34 chr5 16282239 16283894 -186801638 + MLT1A1-int LTR MaLR 1 1735 0 1114 261 64 3 chr5 16283894 16284188 -186801344 + MLT1A1 LTR MaLR 1 312 -53 2806 134 7 0 chr5 16284188 16284614 -186800918 + MER57B LTR ERV1 1 429 -5 355 158 0 0 chr5 16284619 16284676 -186800856 + MLT1A1 LTR MaLR 309 365 0 282 257 43 0 chr5 16284676 16284745 -186800787 + MLT1C LTR MaLR 84 155 -350 564 255 41 7 chr5 16284804 16284949 -186800583 + MLT1C LTR MaLR 318 467 0 1187 222 56 56 chr5 16285286 16285660 -186799872 - MLT1A2 LTR MaLR 0 374 1 26 30 0 0 chr5 16286453 16286486 -186799046 + AT_rich Low_complexity Low_complexity 1 33 0 365 168 69 59 chr5 16286596 16286697 -186798835 + MLT1A1 LTR MaLR 27 128 -377 * 1228 207 16 43 chr5 16286677 16286982 -186798550 + MLT1D LTR MaLR 209 505 0 892 178 35 11 chr5 16287132 16287306 -186798226 + L1MA2 LINE L1 16 193 -7372 * 9439 171 42 6 chr5 16287290 16289907 -186795625 + L1MA2 LINE L1 4025 6813 -910 262 67 44 0 chr5 16289907 16289952 -186795580 + (CTAAT)n Simple_repeat Simple_repeat 3 49 0 9439 171 42 6 chr5 16289952 16290894 -186794638 + L1MA2 LINE L1 6813 7720 -3 2253 109 0 0 chr5 16290915 16291218 -186794314 + AluSg SINE Alu 1 303 -7 242 164 18 0 chr5 16293225 16293280 -186792252 + (TA)n Simple_repeat Simple_repeat 1 56 0 1985 152 3 0 chr5 16294568 16294865 -186790667 + AluJb SINE Alu 1 298 -14 451 294 78 65 chr5 16295302 16295476 -186790056 + HAL1 LINE L1 1810 1980 -527 1908 224 32 60 chr5 16295476 16296043 -186789489 - MLT2B3 LTR ERVL 0 554 4 451 294 78 65 chr5 16296043 16296252 -186789280 + HAL1 LINE L1 1980 2198 -309 1986 321 37 11 chr5 16296781 16297529 -186788003 - ERVL LTR ERVL -2956 2808 2041 1763 237 63 83 chr5 16297752 16298727 -186786805 - L1M LINE L1 -749 5397 4460 190 342 13 25 chr5 16298857 16298936 -186786596 - MIR3 SINE MIR -32 176 99 397 276 152 69 chr5 16299243 16299913 -186785619 - LTR41 LTR ERVL -47 726 1 201 292 83 0 chr5 16300221 16300293 -186785239 + L2 LINE L2 1561 1638 -1676 2510 309 78 40 chr5 16300305 16301347 -186784185 + L2 LINE L2 1772 2864 -449 1726 246 52 6 chr5 16301347 16301830 -186783702 - MLT1D LTR MaLR 0 505 1 2510 309 78 40 chr5 16301830 16301960 -186783572 + L2 LINE L2 2864 2988 -325 395 303 14 28 chr5 16402313 16402458 -186683074 - L1M2 LINE L1 -5782 1067 925 316 263 68 25 chr5 16402621 16402739 -186682793 - L1M2 LINE L1 -6018 831 709 877 288 29 34 chr5 16403268 16403685 -186681847 - L1PA12 LINE L1 -7166 415 1 184 380 30 48 chr5 16404432 16404598 -186680934 - L2 LINE L2 -264 3008 2846 206 339 139 17 chr5 16404765 16404880 -186680652 + MIR3 SINE MIR 59 187 -21 4428 164 73 32 chr5 16404959 16405831 -186679701 - MER21A LTR ERV1 0 931 24 189 74 0 0 chr5 16405831 16405858 -186679674 + (TC)n Simple_repeat Simple_repeat 2 28 0 240 143 0 0 chr5 16405861 16405903 -186679629 + (CA)n Simple_repeat Simple_repeat 1 42 0 212 282 35 12 chr5 16408836 16408921 -186676611 + (CATA)n Simple_repeat Simple_repeat 4 90 0 387 0 0 0 chr5 16409513 16409556 -186675976 + (TG)n Simple_repeat Simple_repeat 1 43 0 753 191 33 16 chr5 16409891 16410074 -186675458 + L1MA6 LINE L1 6112 6297 -3 403 249 100 53 chr5 16410338 16410417 -186675115 - L1ME3A LINE L1 -286 5884 5810 387 315 11 11 chr5 16410417 16410595 -186674937 + MER5B DNA MER1_type 1 178 0 403 249 100 53 chr5 16410595 16410796 -186674736 - L1ME3A LINE L1 -360 5810 5591 2601 105 8 0 chr5 16410834 16411195 -186674337 - THE1B LTR MaLR 0 364 1 3627 197 57 3 chr5 16411347 16412355 -186673177 + L1PA16 LINE L1 4517 5575 -591 2653 146 81 6 chr5 16412364 16412857 -186672675 + L1PA16 LINE L1 5637 6166 0 1645 196 17 8 chr5 16412857 16413212 -186672320 + L1MB4 LINE L1 5815 6179 -1 422 300 141 7 chr5 16413377 16413654 -186671878 + L1M4 LINE L1 4514 4827 -1319 495 0 0 0 chr5 16413712 16413767 -186671765 + (CA)n Simple_repeat Simple_repeat 2 56 0 236 290 86 27 chr5 16413802 16414023 -186671509 + L1M4 LINE L1 5045 5278 -868 3327 212 97 54 chr5 16414177 16415403 -186670129 - L1M4 LINE L1 -1599 4547 3269 446 211 108 58 chr5 16415509 16415732 -186669800 - L1M4 LINE L1 -2314 3832 3599 2335 184 29 66 chr5 16415988 16416515 -186669017 + MLT2B2 LTR ERVL 1 507 -8 491 297 44 29 chr5 16416520 16416867 -186668665 - L1M4 LINE L1 -2841 3305 2932 23 0 0 0 chr5 16417009 16417032 -186668500 + AT_rich Low_complexity Low_complexity 1 23 0 1653 211 63 41 chr5 16419125 16419617 -186665915 + MLT1D LTR MaLR 3 505 0 2262 167 2 18 chr5 16421514 16421729 -186663803 - MLT1B LTR MaLR 0 390 173 901 29 50 7 chr5 16421729 16421868 -186663664 + (TCTA)n Simple_repeat Simple_repeat 2 146 0 2043 117 14 0 chr5 16421869 16422150 -186663382 - AluSx SINE Alu -25 287 3 2262 167 2 18 chr5 16422150 16422328 -186663204 - MLT1B LTR MaLR -216 174 1 443 188 26 60 chr5 16422754 16422871 -186662661 - MIR SINE MIR -44 218 106 1703 238 88 62 chr5 16422886 16423486 -186662046 - MLT1E2 LTR MaLR -8 618 1 271 298 75 92 chr5 16423565 16423954 -186661578 - MLT1H LTR MaLR -145 404 23 712 269 122 0 chr5 16424091 16424288 -186661244 - MER58A DNA MER1_type -3 221 1 888 308 39 57 chr5 16424293 16424635 -186660897 + MSTB2 LTR MaLR 1 414 -43 184 250 0 67 chr5 16425605 16425665 -186659867 + MER5B DNA MER1_type 3 58 -120 726 271 143 31 chr5 16425804 16426356 -186659176 - MLT1G LTR MaLR -7 583 13 228 159 87 58 chr5 16427131 16427200 -186658332 - L2 LINE L2 -1 3312 3242 186 189 0 0 chr5 16427926 16427963 -186657569 + (CATATA)n Simple_repeat Simple_repeat 6 42 0 225 245 20 0 chr5 16429177 16429226 -186656306 - L2 LINE L2 -23 3290 3241 910 193 10 40 chr5 16429418 16429620 -186655912 + MSTC LTR MaLR 31 226 -202 696 24 0 0 chr5 16429645 16429727 -186655805 + (TG)n Simple_repeat Simple_repeat 1 82 0 1665 192 34 3 chr5 16429952 16430295 -186655237 - MLT2C1 LTR ERVL -39 425 1 276 301 62 9 chr5 16430902 16431015 -186654517 - MIR SINE MIR -66 196 78 2743 16 7 0 chr5 16431817 16432125 -186653407 - AluY SINE Alu -1 310 1 245 392 31 31 chr5 16433332 16433559 -186651973 + MIR SINE MIR 6 232 -30 187 364 0 0 chr5 16433851 16433917 -186651615 - L3 LINE CR1 -863 714 649 1028 296 71 21 chr5 16434085 16434608 -186650924 - MLT1H1 LTR MaLR 0 555 1 238 268 78 56 chr5 16434636 16434778 -186650754 - MLT1H1-int LTR MaLR -30 1341 1197 2268 95 0 3 chr5 16435312 16435606 -186649926 - AluSg SINE Alu -1 309 17 661 128 0 0 chr5 16435618 16435712 -186649820 - L1P LINE L1 -1545 4601 4508 573 266 32 48 chr5 16435976 16436038 -186649494 + MER20 DNA MER1_type 35 96 -123 2705 165 18 8 chr5 16436038 16436528 -186649004 - LOR1a LTR ERV1 -2 495 1 573 266 32 48 chr5 16436528 16436653 -186648879 + MER20 DNA MER1_type 96 219 0 5056 134 29 1 chr5 16436700 16437550 -186647982 - L1PA11 LINE L1 -804 5342 4469 5214 117 22 16 chr5 16437551 16438365 -186647167 + L1PA11 LINE L1 5356 6174 0 331 293 0 28 chr5 16438450 16438556 -186646976 - MLT1H1-int LTR MaLR -856 515 413 289 267 29 9 chr5 16438537 16438642 -186646890 - MLT1H1-int LTR MaLR -1261 110 4 * 1126 269 52 3 chr5 16438645 16439118 -186646414 - MLT1H1 LTR MaLR 0 555 1 189 0 0 0 chr5 16439709 16439730 -186645802 + (A)n Simple_repeat Simple_repeat 1 21 0 1676 166 16 29 chr5 16439737 16440050 -186645482 + AluJb SINE Alu 1 309 -3 342 301 109 60 chr5 16440432 16440862 -186644670 + HAL1b LINE L1 12 394 -954 1120 170 25 23 chr5 16440919 16441239 -186644293 + THE1C LTR MaLR 1 375 0 339 321 177 9 chr5 16441247 16441462 -186644070 + HAL1b LINE L1 478 728 -620 2517 69 0 0 chr5 16442040 16442344 -186643188 + AluY SINE Alu 1 304 -7 453 286 18 41 chr5 16442360 16442580 -186642952 + L1MC5 LINE L1 6963 7177 -784 391 272 80 34 chr5 16442778 16443017 -186642515 + L1MC5 LINE L1 7323 7572 -389 991 194 108 108 chr5 16443155 16443569 -186641963 + MLT1E2 LTR MaLR 137 553 -73 5660 114 18 18 chr5 16443569 16444599 -186640933 + L1PA15 LINE L1 5128 6165 0 991 194 108 108 chr5 16444599 16444674 -186640858 + MLT1E2 LTR MaLR 552 626 0 262 294 49 0 chr5 16444679 16444781 -186640751 + L1MC4 LINE L1 7761 7867 -175 304 259 38 84 chr5 16445461 16445592 -186639940 - L2 LINE L2 -10 3303 3179 758 235 94 0 chr5 16446144 16446357 -186639175 - MER33 DNA MER1_type -91 233 1 904 249 75 25 chr5 16446977 16447258 -186638274 - MLT1H LTR MaLR -19 530 236 219 69 0 0 chr5 16448222 16448251 -186637281 + (TG)n Simple_repeat Simple_repeat 2 30 0 950 249 100 39 chr5 16448251 16448661 -186636871 - L1ME LINE L1 -2377 3703 3269 323 122 92 6 chr5 16448735 16448899 -186636633 + (TA)n Simple_repeat Simple_repeat 2 179 0 334 132 66 32 chr5 16448899 16449321 -186636211 + (TATATG)n Simple_repeat Simple_repeat 1 436 0 242 89 63 25 chr5 16449421 16449500 -186636032 + (TA)n Simple_repeat Simple_repeat 1 82 0 1007 261 89 66 chr5 16449500 16450534 -186634998 - L1ME LINE L1 -4425 1655 482 319 294 18 88 chr5 16450685 16450898 -186634634 - L1ME LINE L1 -5592 478 273 306 328 118 20 chr5 16451303 16451498 -186634034 - L1ME LINE L1 -5845 225 12 23 54 0 0 chr5 16451837 16451874 -186633658 + AT_rich Low_complexity Low_complexity 1 37 0 575 271 135 14 chr5 16451894 16452175 -186633357 - MER46C DNA MER2_type -6 332 18 23 0 0 0 chr5 16452257 16452280 -186633252 + AT_rich Low_complexity Low_complexity 1 23 0 2008 175 39 3 chr5 16452446 16452828 -186632704 - MSTD LTR MaLR 0 396 1 22 99 0 0 chr5 16453515 16453586 -186631946 + AT_rich Low_complexity Low_complexity 1 71 0 5664 163 20 21 chr5 16454354 16454780 -186630752 + L1MA5 LINE L1 4683 5108 -1192 1824 122 0 0 chr5 16454780 16455034 -186630498 + AluSg SINE Alu 47 300 -10 5664 163 20 21 chr5 16455034 16456221 -186629311 + L1MA5 LINE L1 5108 6294 -6 505 231 32 26 chr5 16457302 16457458 -186628074 - LTR37B LTR ERV1 -1 467 311 420 207 47 98 chr5 16457572 16457765 -186627767 - LTR37B LTR ERV1 -206 262 80 21 36 0 0 chr5 16458100 16458128 -186627404 + AT_rich Low_complexity Low_complexity 1 28 0 346 304 41 50 chr5 16458320 16458540 -186626992 - L2 LINE L2 0 3313 3096 1565 229 24 41 chr5 16458540 16458955 -186626577 + LTR52 LTR ERVL 1 408 -13 579 305 110 64 chr5 16458968 16459662 -186625870 - L2 LINE L2 -227 3086 2360 4921 67 6 21 chr5 16459851 16460318 -186625214 - L1PA8 LINE L1 -4 6168 5712 1865 146 45 0 chr5 16460318 16460605 -186624927 + AluSx SINE Alu 1 300 -12 4921 67 6 21 chr5 16460605 16460807 -186624725 - L1PA8 LINE L1 -460 5712 5509 6461 106 19 11 chr5 16460810 16461493 -186624039 - L1P LINE L1 -755 5391 4696 315 0 0 0 chr5 16461493 16461528 -186624004 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6461 106 19 11 chr5 16461528 16461868 -186623664 - L1P LINE L1 -1450 4696 4360 528 219 16 8 chr5 16462591 16462719 -186622813 + L1MB7 LINE L1 6033 6161 -23 23 33 0 0 chr5 16463224 16463254 -186622278 + AT_rich Low_complexity Low_complexity 1 30 0 2563 190 91 12 chr5 16463483 16463978 -186621554 + MLT2B3 LTR ERVL 2 535 -19 225 0 0 0 chr5 16463979 16464004 -186621528 + (CCTA)n Simple_repeat Simple_repeat 3 27 0 341 346 6 19 chr5 16464160 16464316 -186621216 + MLT1I LTR MaLR 79 232 -177 315 0 0 0 chr5 16464769 16464804 -186620728 + (TA)n Simple_repeat Simple_repeat 1 35 0 231 289 0 11 chr5 16464804 16464894 -186620638 - L1MC4 LINE L1 -1339 6703 6615 225 234 0 16 chr5 16464865 16464929 -186620603 - L1MC4 LINE L1 -1339 6703 6641 * 226 250 0 33 chr5 16464973 16465065 -186620467 + L1MC4 LINE L1 6614 6702 -1340 236 239 28 0 chr5 16465126 16465197 -186620335 + L1MC3 LINE L1 6574 6646 -1139 256 240 0 62 chr5 16465205 16465301 -186620231 + L1MC4 LINE L1 6614 6703 -1339 324 341 7 22 chr5 16465745 16465883 -186619649 - MLT1I LTR MaLR -177 232 97 246 234 63 72 chr5 16465950 16466061 -186619471 - L1MC4 LINE L1 -1324 6718 6609 276 179 64 0 chr5 16466061 16466139 -186619393 + (TA)n Simple_repeat Simple_repeat 1 83 0 994 270 56 20 chr5 16466484 16466899 -186618633 - MLT2F LTR ERVL -122 541 67 1710 245 62 29 chr5 16467645 16468130 -186617402 - MLT1E2 LTR MaLR -9 617 117 3811 71 29 20 chr5 16469003 16469552 -186615980 + MER41A LTR ERV1 1 554 0 270 130 338 13 chr5 16469552 16469629 -186615903 + MER41A-int LTR ERV1 1 102 -5844 2095 182 50 66 chr5 16470449 16470695 -186614837 + MER67D LTR ERV1 6 254 -260 2030 106 48 10 chr5 16470695 16470987 -186614545 + AluSx SINE Alu 1 303 -9 2095 182 50 66 chr5 16470987 16471257 -186614275 + MER67D LTR ERV1 254 514 0 1433 249 78 42 chr5 16471708 16472207 -186613325 - LTR40a LTR ERVL 0 519 3 519 298 123 52 chr5 16472280 16472606 -186612926 + L2 LINE L2 2438 2786 -528 443 285 133 67 chr5 16472648 16473009 -186612523 + L2 LINE L2 2920 3304 -9 767 210 11 54 chr5 16473353 16473539 -186611993 - L1MC1 LINE L1 -1 6332 6155 1954 145 3 0 chr5 16473539 16473835 -186611697 + AluSx SINE Alu 1 297 -15 1590 176 0 17 chr5 16473845 16474135 -186611397 + AluSx SINE Alu 2 286 -26 1307 132 4 33 chr5 16474154 16474396 -186611136 - L1MC1 LINE L1 -174 6159 5925 1422 189 81 39 chr5 16474400 16474700 -186610832 + MER7A DNA MER2_type 2 317 -2721 2255 122 18 52 chr5 16474700 16475086 -186610446 + THE1C LTR MaLR 1 373 -2 1422 189 81 39 chr5 16475086 16475118 -186610414 + MER7A DNA MER2_type 317 346 0 2252 185 21 19 chr5 16475118 16475583 -186609949 - L1MC1 LINE L1 -410 5923 5458 3047 97 43 7 chr5 16476105 16476567 -186608965 - L1MA1 LINE L1 -5 6297 5819 328 62 0 0 chr5 16476594 16476642 -186608890 - Alu SINE Alu 0 300 253 2711 120 0 0 chr5 16476642 16477043 -186608489 - L1MA1 LINE L1 -474 5828 5428 7601 204 29 16 chr5 16477057 16478854 -186606678 - L1PB4 LINE L1 0 6156 4317 1455 97 0 5 chr5 16478854 16479061 -186606471 - AluY SINE Alu 0 311 106 7601 204 29 16 chr5 16479061 16479757 -186605775 - L1PB4 LINE L1 -1839 4317 3632 1023 193 14 41 chr5 16480068 16480286 -186605246 + AluJo SINE Alu 89 300 -12 989 264 56 56 chr5 16480371 16480834 -186604698 - MLT1C LTR MaLR -4 463 1 299 294 28 14 chr5 16480993 16481136 -186604396 + L1ME1 LINE L1 4980 5124 -1022 287 262 134 55 chr5 16481192 16481356 -186604176 + L1MD2 LINE L1 6011 6187 -172 2266 235 113 33 chr5 16481391 16482175 -186603357 + L1ME1 LINE L1 5315 6161 -5 220 349 173 34 chr5 16482410 16482943 -186602589 + L2 LINE L2 1642 2248 -1066 21 0 0 0 chr5 16483345 16483366 -186602166 + AT_rich Low_complexity Low_complexity 1 21 0 277 200 0 0 chr5 16483407 16483462 -186602070 - MSTD LTR MaLR -13 383 329 1102 221 31 3 chr5 16483462 16483788 -186601744 + L1 LINE L1 4844 5193 -953 * 2058 171 5 3 chr5 16483784 16484170 -186601362 - L1P LINE L1 -978 5168 4782 1980 139 3 15 chr5 16484170 16484495 -186601037 + L1PA13 LINE L1 5831 6163 0 3097 145 30 0 chr5 16484496 16485073 -186600459 + L1P5 LINE L1 5184 5773 -381 216 97 0 0 chr5 16485079 16485110 -186600422 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 1914 186 63 32 chr5 16485259 16485722 -186599810 + L1MC2 LINE L1 5858 6334 -10 5779 84 12 24 chr5 16485748 16486609 -186598923 + L1PA11 LINE L1 5363 6213 0 22 35 0 0 chr5 16486616 16486645 -186598887 + AT_rich Low_complexity Low_complexity 1 29 0 657 333 46 11 chr5 16486649 16487021 -186598511 - MLT1I LTR MaLR -10 399 15 207 0 0 0 chr5 16487812 16487835 -186597697 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 312 155 0 0 chr5 16487865 16487936 -186597596 + CT-rich Low_complexity Low_complexity 2 72 0 740 223 28 107 chr5 16487989 16488247 -186597285 + L1M4c LINE L1 1371 1648 -4735 2602 105 0 21 chr5 16488247 16488619 -186596913 - THE1B LTR MaLR 0 364 1 740 223 28 107 chr5 16488619 16488716 -186596816 + L1M4c LINE L1 1648 2100 -4283 3982 233 41 11 chr5 16488851 16490039 -186595493 + L1 LINE L1 4110 5333 -813 1115 279 16 32 chr5 16490041 16490480 -186595052 + L1 LINE L1 1621 2063 -5146 * 3394 183 77 8 chr5 16490479 16491268 -186594264 + L1 LINE L1 5072 5915 -1293 1912 87 48 84 chr5 16492198 16492507 -186593025 - AluSx SINE Alu -14 298 1 21 57 0 0 chr5 16492639 16492674 -186592858 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 16492807 16492828 -186592704 + AT_rich Low_complexity Low_complexity 1 21 0 934 241 4 13 chr5 16493188 16493425 -186592107 + L1PA16 LINE L1 1361 1595 -5254 6948 221 40 12 chr5 16493431 16494611 -186590921 + L1PA16 LINE L1 1731 2877 -3972 2381 91 3 0 chr5 16494611 16494918 -186590614 + AluY SINE Alu 1 308 -3 6948 221 40 12 chr5 16494918 16496718 -186588814 + L1PA16 LINE L1 2877 4804 -2045 497 250 14 0 chr5 16496719 16496863 -186588669 + L1 LINE L1 4868 5013 -1836 1499 155 99 40 chr5 16496863 16497217 -186588315 + THE1C LTR MaLR 1 375 0 9494 131 16 37 chr5 16497219 16498832 -186586700 + THE1C-int LTR MaLR 3 1580 0 792 174 85 57 chr5 16498832 16499044 -186586488 + THE1C LTR MaLR 1 218 -146 4230 162 53 30 chr5 16499044 16499453 -186586079 + L1PA16 LINE L1 5530 5928 -941 2398 140 57 2 chr5 16499453 16499859 -186585673 - MSTA LTR MaLR 0 428 1 4230 162 53 30 chr5 16499859 16500768 -186584764 + L1PA16 LINE L1 5928 6869 0 832 274 93 17 chr5 16501727 16502147 -186583385 + HsTC2 DNA Tc2 40 491 -1407 409 206 58 26 chr5 16502217 16502372 -186583160 + HsTC2 DNA Tc2 1741 1900 0 478 234 72 9 chr5 16504245 16504356 -186581176 + MER5C DNA MER1_type 2 119 -205 200 233 183 0 chr5 16504475 16504535 -186580997 + MER5C DNA MER1_type 247 317 -7 189 0 0 0 chr5 16505136 16505157 -186580375 + (CA)n Simple_repeat Simple_repeat 1 21 0 282 116 0 0 chr5 16505211 16505254 -186580278 + (CA)n Simple_repeat Simple_repeat 1 43 0 201 121 0 0 chr5 16505310 16505343 -186580189 + (CA)n Simple_repeat Simple_repeat 1 33 0 204 97 0 0 chr5 16505415 16505446 -186580086 + (CA)n Simple_repeat Simple_repeat 1 31 0 468 314 103 0 chr5 16505699 16505874 -186579658 + MIR SINE MIR 40 232 -30 200 35 35 0 chr5 16506396 16506425 -186579107 + (GA)n Simple_repeat Simple_repeat 2 31 0 1701 166 51 7 chr5 16507030 16507325 -186578207 - AluJb SINE Alu -4 308 1 1530 195 35 27 chr5 16507744 16507924 -186577608 + L1MB8 LINE L1 5462 5639 -527 2161 130 18 50 chr5 16507924 16508323 -186577209 + MLT1B LTR MaLR 5 390 0 1530 195 35 27 chr5 16508323 16508695 -186576837 + L1MB8 LINE L1 5639 6121 -45 699 86 0 0 chr5 16508732 16508825 -186576707 - AluS SINE Alu -212 101 9 1352 134 19 0 chr5 16508825 16509034 -186576498 + AluSg/x SINE Alu 97 309 -3 235 372 28 0 chr5 16511820 16511953 -186573579 - MIR3 SINE MIR -15 193 53 2670 178 46 48 chr5 16512036 16512055 -186573477 + L1MC3 LINE L1 6603 6621 -1164 449 141 26 0 chr5 16512055 16512133 -186573399 + MADE1 DNA Mariner 1 80 0 2670 178 46 48 chr5 16512133 16512827 -186572705 + L1MC3 LINE L1 6621 7315 -470 461 296 0 40 chr5 16512828 16512980 -186572552 + MLT1G1 LTR MaLR 167 312 -283 593 219 18 43 chr5 16513000 16513164 -186572368 - MLT1G1 LTR MaLR -435 160 1 522 325 181 42 chr5 16513164 16514079 -186571453 - L2 LINE L2 -1568 1746 704 276 239 86 129 chr5 16514880 16515135 -186570397 - L2 LINE L2 -57 3256 3013 722 250 128 76 chr5 16515574 16516106 -186569426 - MLT1F1 LTR MaLR -4 563 10 2286 128 5 16 chr5 16517746 16518114 -186567418 - THE1B LTR MaLR 0 364 1 1367 159 29 40 chr5 16518114 16518391 -186567141 - MER50 LTR ERV1 -28 706 433 1237 129 36 18 chr5 16518385 16518610 -186566922 - MER50 LTR ERV1 -505 229 1 * 386 244 79 55 chr5 16518697 16518861 -186566671 - MLT1H LTR MaLR 0 549 382 744 212 139 124 chr5 16518901 16519377 -186566155 + MER21B LTR ERV1 9 491 -372 3586 275 35 53 chr5 16519399 16521476 -186564056 + L1M4c LINE L1 48 1976 -5192 1921 163 78 3 chr5 16521787 16522148 -186563384 + MLT1B LTR MaLR 1 388 -2 1199 94 49 67 chr5 16522242 16522466 -186563066 + MER50 LTR ERV1 1 220 -514 1517 272 103 28 chr5 16522592 16523156 -186562376 - L2 LINE L2 -802 2512 1895 213 39 0 0 chr5 16523156 16523182 -186562350 + (ATG)n Simple_repeat Simple_repeat 3 28 0 1517 272 103 28 chr5 16523182 16523250 -186562282 - L2 LINE L2 -1419 1895 1833 354 298 33 13 chr5 16523326 16523477 -186562055 - L2 LINE L2 -2241 1073 920 377 197 0 0 chr5 16523482 16523553 -186561979 - MLT1A2 LTR MaLR -2 372 302 1734 194 38 29 chr5 16523553 16524101 -186561431 + MLT2A2 LTR ERVL 1 554 0 1078 103 62 36 chr5 16524217 16524411 -186561121 + MER50 LTR ERV1 22 220 -514 1428 124 3 78 chr5 16524413 16524695 -186560837 + MER50 LTR ERV1 437 697 -37 1144 266 43 26 chr5 16525480 16525901 -186559631 - LTR16A LTR ERVL -9 441 14 258 353 37 20 chr5 16526368 16526668 -186558864 - HERV16 LTR ERVL -764 5000 4696 1261 365 51 29 chr5 16526761 16528297 -186557235 - HERV16 LTR ERVL -1206 4558 2988 41122 30 22 1 chr5 16528542 16534571 -186550961 + L1HS LINE L1 1 6154 -1 306 292 110 38 chr5 16534574 16534783 -186550749 + L1M4c LINE L1 3006 3229 -3940 1971 296 69 36 chr5 16534975 16536034 -186549498 - HERV16 LTR ERVL -3710 1286 193 263 301 69 45 chr5 16536081 16536333 -186549199 - LTR16A LTR ERVL -139 311 61 22 35 0 0 chr5 16536674 16536703 -186548829 + AT_rich Low_complexity Low_complexity 1 29 0 241 356 69 20 chr5 16536928 16537029 -186548503 + L2 LINE L2 3161 3266 -6 572 244 199 42 chr5 16537522 16537878 -186547654 + MLT1J LTR MaLR 53 464 -47 1625 223 61 51 chr5 16538779 16539286 -186546246 - LTR40a LTR ERVL -7 512 1 2321 56 0 11 chr5 16539330 16539701 -186545831 + AluY SINE Alu 1 368 0 727 204 50 0 chr5 16539701 16539882 -186545650 + MER3 DNA MER1_type 19 208 -1 1614 215 33 62 chr5 16540196 16540716 -186544816 - MLT1D LTR MaLR 0 505 1 754 328 67 51 chr5 16540771 16541303 -186544229 - L2 LINE L2 -82 3231 2709 1896 155 0 13 chr5 16541303 16541607 -186543925 - AluSx SINE Alu -7 305 6 754 328 67 51 chr5 16541607 16542060 -186543472 - L2 LINE L2 -604 2709 2210 300 53 0 0 chr5 16542060 16542098 -186543434 + (TA)n Simple_repeat Simple_repeat 2 39 0 754 328 67 51 chr5 16542098 16542276 -186543256 - L2 LINE L2 -1103 2210 2036 1548 129 14 7 chr5 16542276 16542555 -186542977 + L1MA7 LINE L1 6011 6291 0 3777 170 7 3 chr5 16542560 16543279 -186542253 - L1PA15 LINE L1 -2026 4120 3399 5440 162 20 11 chr5 16543281 16543768 -186541764 + L1PA15 LINE L1 4153 4634 -1531 1598 188 67 0 chr5 16543768 16544050 -186541482 + AluSx SINE Alu 1 301 -11 5440 162 20 11 chr5 16544050 16545431 -186540101 + L1PA15 LINE L1 4634 6034 -131 1824 126 22 7 chr5 16545435 16545706 -186539826 + AluSx SINE Alu 1 275 -37 417 103 0 15 chr5 16545706 16545774 -186539758 + L1PA15 LINE L1 6092 6158 -7 216 216 0 0 chr5 16545898 16545949 -186539583 + (TA)n Simple_repeat Simple_repeat 1 51 0 717 308 152 38 chr5 16545966 16546551 -186538981 - L2 LINE L2 -1268 2046 1395 457 298 62 19 chr5 16546894 16547055 -186538477 - MIR SINE MIR -74 188 21 1889 155 15 48 chr5 16549031 16549339 -186536193 - MLT1B LTR MaLR 0 390 96 2140 109 0 0 chr5 16549339 16549623 -186535909 + AluSg SINE Alu 7 290 -20 1889 155 15 48 chr5 16549623 16549708 -186535824 - MLT1B LTR MaLR -294 96 10 3430 25 5 0 chr5 16549712 16550113 -186535419 + L1PA3 LINE L1 5743 6145 -10 188 308 154 0 chr5 16550385 16550502 -186535030 - L2 LINE L2 -242 3030 2896 25 0 0 0 chr5 16551552 16551577 -186533955 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 16551793 16551821 -186533711 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 16552760 16552802 -186532730 + AT_rich Low_complexity Low_complexity 1 42 0 182 171 98 0 chr5 16552994 16553035 -186532497 - L2 LINE L2 -5 3267 3223 25 65 0 0 chr5 16553826 16553872 -186531660 + AT_rich Low_complexity Low_complexity 1 46 0 208 182 15 45 chr5 16554060 16554126 -186531406 + A-rich Low_complexity Low_complexity 1 64 0 218 240 219 0 chr5 16555043 16555139 -186530393 - MIR SINE MIR -24 238 122 331 319 83 13 chr5 16555418 16555607 -186529925 + MIR SINE MIR 13 214 -48 338 265 0 13 chr5 16556431 16556582 -186528950 + (CATATA)n Simple_repeat Simple_repeat 6 154 0 32 0 0 0 chr5 16556798 16556830 -186528702 + AT_rich Low_complexity Low_complexity 1 32 0 1338 41 18 0 chr5 16558412 16558581 -186526951 + L1PA4 LINE L1 5984 6155 0 1581 292 143 8 chr5 16558666 16559434 -186526098 + L2 LINE L2 35 906 -2408 766 149 6 48 chr5 16559450 16559482 -186526050 + MLT1A2 LTR MaLR 2 34 -340 2367 137 18 0 chr5 16559482 16559868 -186525664 - L1PA11 LINE L1 -5 6169 5777 766 149 6 48 chr5 16559868 16560003 -186525529 + MLT1A2 LTR MaLR 34 162 -212 339 25 0 0 chr5 16560021 16560061 -186525471 + (TC)n Simple_repeat Simple_repeat 2 41 0 234 0 0 0 chr5 16560938 16560964 -186524568 + (A)n Simple_repeat Simple_repeat 1 26 0 306 73 0 0 chr5 16561114 16561155 -186524377 + (TG)n Simple_repeat Simple_repeat 1 41 0 196 231 83 37 chr5 16561367 16561475 -186524057 + L2 LINE L2 2975 3087 -226 1327 220 52 65 chr5 16561481 16561945 -186523587 + MLT2C2 LTR ERVL 7 464 0 287 159 0 0 chr5 16562214 16562272 -186523260 + MLT2C1 LTR ERVL 350 397 0 499 288 35 53 chr5 16562435 16562661 -186522871 - MIR SINE MIR -36 226 5 215 171 0 0 chr5 16564666 16564701 -186520831 + L3 LINE CR1 932 966 -611 407 284 32 13 chr5 16564938 16565093 -186520439 + MER90 LTR ERV1 404 561 -14 425 257 151 0 chr5 16565155 16565307 -186520225 - MER5A DNA MER1_type -6 183 9 189 336 217 14 chr5 16565323 16565466 -186520066 + MER5B DNA MER1_type 1 172 -6 404 308 60 33 chr5 16567629 16567928 -186517604 + L1ME4a LINE L1 5078 5384 -762 607 317 35 16 chr5 16568013 16568385 -186517147 + L1ME4a LINE L1 5483 5861 -260 729 197 58 24 chr5 16568887 16569174 -186516358 - MLT1A2 LTR MaLR -1 373 43 1718 172 35 3 chr5 16569272 16569557 -186515975 + AluJb SINE Alu 1 294 -18 342 0 0 0 chr5 16569564 16569602 -186515930 + (TA)n Simple_repeat Simple_repeat 2 39 0 206 317 79 10 chr5 16570315 16570416 -186515116 + MIR SINE MIR 42 149 -59 344 214 0 24 chr5 16570455 16570539 -186514993 + L1ME4a LINE L1 5960 6041 -80 24 67 0 0 chr5 16570654 16570699 -186514833 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 16570859 16570880 -186514652 + AT_rich Low_complexity Low_complexity 1 21 0 1622 194 56 31 chr5 16571306 16571662 -186513870 + MLT1A1 LTR MaLR 1 365 0 2087 178 34 15 chr5 16571974 16572370 -186513162 - L1MA8 LINE L1 0 6291 5904 2601 145 9 23 chr5 16572370 16572804 -186512728 + MSTC LTR MaLR 1 428 0 2087 178 34 15 chr5 16572804 16572861 -186512671 - L1MA8 LINE L1 -387 5904 5826 216 0 0 0 chr5 16572861 16572885 -186512647 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2087 178 34 15 chr5 16572885 16572896 -186512636 - L1MA8 LINE L1 -465 5826 5817 * 5277 141 23 18 chr5 16572890 16573572 -186511960 - L1PA15 LINE L1 -5 6811 6134 2192 112 36 7 chr5 16573572 16573876 -186511656 - AluSq SINE Alu 0 313 1 5277 141 23 18 chr5 16573876 16575183 -186510349 - L1PA15 LINE L1 -682 6134 4829 5638 217 11 60 chr5 16575194 16576263 -186509269 - L1PA15 LINE L1 -3078 3719 2599 2282 87 3 0 chr5 16576263 16576550 -186508982 + AluY SINE Alu 1 288 -23 5638 217 11 60 chr5 16576550 16577984 -186507548 - L1PA15 LINE L1 -4198 2599 1332 2111 291 19 26 chr5 16578061 16578790 -186506742 - L1PA15 LINE L1 -6063 724 1 9852 174 24 66 chr5 16578806 16579314 -186506218 - L1MA8 LINE L1 -478 5822 5294 2468 104 14 14 chr5 16579314 16579669 -186505863 - THE1A LTR MaLR 0 355 1 9852 174 24 66 chr5 16579669 16581464 -186504068 - L1MA8 LINE L1 -1006 5294 3518 1188 65 19 0 chr5 16581464 16581662 -186503870 - AluY SINE Alu 0 327 127 9852 174 24 66 chr5 16581662 16582263 -186503269 - L1MA8 LINE L1 -2782 3518 2893 2115 212 38 26 chr5 16582264 16582844 -186502688 + MER49 LTR ERV1 180 766 -157 680 255 0 5 chr5 16582983 16583167 -186502365 - L1MA8 LINE L1 -3251 2895 2713 1044 230 119 28 chr5 16583384 16583565 -186501967 + MSTD LTR MaLR 1 164 -232 2009 130 29 35 chr5 16583565 16583941 -186501591 - THE1C LTR MaLR 0 375 2 1044 230 119 28 chr5 16583941 16584120 -186501412 + MSTD LTR MaLR 164 394 -2 6404 228 62 35 chr5 16584122 16585694 -186499838 + MSTD-int LTR MaLR 2 1623 -112 2310 98 0 7 chr5 16585694 16586001 -186499531 - AluSq SINE Alu -8 305 1 6404 228 62 35 chr5 16586001 16586118 -186499414 + MSTD-int LTR MaLR 1623 1735 0 910 210 55 53 chr5 16586118 16586460 -186499072 + MLT1A1 LTR MaLR 1 429 -3 280 319 203 12 chr5 16587020 16587183 -186498349 + MIR SINE MIR 37 230 -32 931 234 152 34 chr5 16587537 16588155 -186497377 + LTR50 LTR ERVL 4 791 -4 334 197 0 0 chr5 16588231 16588292 -186497240 - MER81 DNA DNA -1 113 53 1305 176 119 62 chr5 16588557 16588926 -186496606 - MLT1B LTR MaLR 0 390 1 26 0 0 0 chr5 16588979 16589005 -186496527 + AT_rich Low_complexity Low_complexity 1 26 0 216 125 0 0 chr5 16590748 16590780 -186494752 + L2 LINE L2 3240 3271 -1 3153 77 31 4 chr5 16591011 16591465 -186494067 - MER41A LTR ERV1 0 554 89 2121 244 31 4 chr5 16591568 16592078 -186493454 + MLT-int LTR MaLR 1050 1625 -110 2466 79 0 6 chr5 16592079 16592394 -186493138 - AluSq SINE Alu 0 313 1 1576 123 68 0 chr5 16592797 16593033 -186492499 - AluSx SINE Alu -18 294 43 1517 188 21 3 chr5 16594193 16594518 -186491014 + L1MB3 LINE L1 5851 6181 -2 2432 111 28 8 chr5 16594624 16595096 -186490436 + MER1A DNA MER1_type 2 529 0 228 274 53 32 chr5 16595371 16595466 -186490066 - L3 LINE CR1 -3 1574 1478 2340 114 14 3 chr5 16598216 16598567 -186486965 - THE1A LTR MaLR 0 355 1 198 182 30 121 chr5 16599550 16599616 -186485916 - L2 LINE L2 -1 3312 3253 305 314 126 42 chr5 16599757 16600018 -186485514 - L2 LINE L2 -182 3090 2808 329 265 112 39 chr5 16600865 16601064 -186484468 - MIR SINE MIR -46 216 2 897 135 11 17 chr5 16601384 16601562 -186483970 + CT-rich Low_complexity Low_complexity 4 180 0 190 303 71 30 chr5 16604056 16604155 -186481377 + MER5B DNA MER1_type 31 133 -45 281 316 53 23 chr5 16604351 16604484 -186481048 - MIR3 SINE MIR -51 157 21 457 124 41 28 chr5 16604484 16604629 -186480903 + (TCTA)n Simple_repeat Simple_repeat 3 149 0 385 296 228 29 chr5 16605459 16606051 -186479481 + L2 LINE L2 2157 2866 -448 187 283 22 0 chr5 16606166 16606212 -186479320 + L2 LINE L2 3015 3061 -252 801 201 41 55 chr5 16609297 16609516 -186476016 + MER20 DNA MER1_type 3 218 -1 808 59 0 0 chr5 16610666 16610768 -186474764 + AluY SINE Alu 206 307 -4 463 336 7 7 chr5 16611274 16611420 -186474112 + MIR3 SINE MIR 27 172 -36 1927 140 70 22 chr5 16611528 16611886 -186473646 - THE1C LTR MaLR 0 375 1 226 324 65 14 chr5 16612417 16612556 -186472976 + L2 LINE L2 1714 1859 -1455 2237 115 0 3 chr5 16612583 16612888 -186472644 + AluSx SINE Alu 1 304 -8 923 247 57 22 chr5 16614366 16614735 -186470797 - L1ME3 LINE L1 0 6162 5781 1539 204 45 47 chr5 16614741 16615163 -186470369 + MER63B DNA MER1_type 6 426 -10 785 258 155 15 chr5 16615176 16615871 -186469661 - L1ME3 LINE L1 -383 5787 5004 1201 101 9 85 chr5 16618488 16618804 -186466728 - AluY SINE Alu -19 292 1 532 291 59 25 chr5 16619639 16619842 -186465690 - MIR SINE MIR 0 262 53 31 0 0 0 chr5 16619872 16619903 -186465629 + AT_rich Low_complexity Low_complexity 1 31 0 556 246 126 6 chr5 16620739 16620922 -186464610 + MER58C DNA MER1_type 9 213 -2 216 0 0 0 chr5 16621600 16621624 -186463908 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1785 150 34 0 chr5 16621624 16621891 -186463641 - AluJb SINE Alu -32 280 5 235 257 0 40 chr5 16622027 16622101 -186463431 + MER69 DNA AcHobo 2456 2526 0 1039 165 30 9 chr5 16622359 16622589 -186462943 - L1PA13 LINE L1 -790 5356 5122 5529 94 5 4 chr5 16622595 16623420 -186462112 + L1PA13 LINE L1 5338 6163 0 304 239 54 15 chr5 16624708 16624838 -186460694 - L1ME4a LINE L1 -246 5875 5741 2083 117 4 4 chr5 16625115 16625396 -186460136 + AluSp SINE Alu 1 281 -32 635 60 0 0 chr5 16625839 16625923 -186459609 + L1PA4 LINE L1 6069 6152 -3 1640 115 70 25 chr5 16627231 16627545 -186457987 - MER46B DNA MER2_type -1 235 33 1620 179 50 52 chr5 16628016 16628436 -186457096 + LTR52 LTR ERVL 1 419 -2 222 195 0 0 chr5 16628490 16628531 -186457001 + CT-rich Low_complexity Low_complexity 4 44 0 21 57 0 0 chr5 16628657 16628692 -186456840 + AT_rich Low_complexity Low_complexity 1 35 0 211 292 0 0 chr5 16629851 16629899 -186455633 + polypyrimidine Low_complexity Low_complexity 6 53 0 226 278 19 0 chr5 16629926 16629980 -186455552 - L3 LINE CR1 -4 1573 1519 204 97 0 0 chr5 16630409 16630440 -186455092 + (CAA)n Simple_repeat Simple_repeat 3 33 0 10136 35 7 0 chr5 16631049 16633057 -186452475 + L1PA5 LINE L1 4128 6146 -8 21 57 0 0 chr5 16634083 16634118 -186451414 + AT_rich Low_complexity Low_complexity 1 35 0 6471 109 23 21 chr5 16635316 16636623 -186448909 - L1MA5A LINE L1 0 6297 4993 287 96 19 0 chr5 16636725 16636777 -186448755 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 319 311 110 26 chr5 16637963 16638183 -186447349 - MIR SINE MIR -11 251 16 852 271 121 31 chr5 16638912 16639293 -186446239 - L2 LINE L2 0 3313 2898 503 200 350 0 chr5 16639293 16639433 -186446099 + MER5A DNA MER1_type 1 189 0 1907 252 96 17 chr5 16639445 16640081 -186445451 - L2 LINE L2 -426 2888 2203 2102 137 16 26 chr5 16640394 16640773 -186444759 - THE1C LTR MaLR 0 375 1 28 0 0 0 chr5 16641692 16641720 -186443812 + AT_rich Low_complexity Low_complexity 1 28 0 2002 148 0 16 chr5 16641856 16642173 -186443359 - AluSx SINE Alu 0 312 1 986 114 8 0 chr5 16642178 16642310 -186443222 - AluSq/x SINE Alu -179 133 1 1959 96 0 99 chr5 16643226 16643548 -186441984 + AluSq SINE Alu 1 290 -23 24 0 0 0 chr5 16643848 16643872 -186441660 + AT_rich Low_complexity Low_complexity 1 24 0 507 304 54 87 chr5 16644974 16645422 -186440110 - L2 LINE L2 -13 3300 2868 1473 186 29 43 chr5 16645599 16645971 -186439561 - MLT1A2 LTR MaLR -4 622 1 216 238 0 0 chr5 16646190 16646253 -186439279 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 394 308 178 0 chr5 16646708 16646877 -186438655 + MIR SINE MIR 63 261 -1 1314 188 19 58 chr5 16647131 16647286 -186438246 + MLT1A1 LTR MaLR 1 160 -205 2181 100 3 10 chr5 16647286 16647577 -186437955 + AluSx SINE Alu 3 291 -21 1314 188 19 58 chr5 16647577 16647783 -186437749 + MLT1A1 LTR MaLR 160 348 -17 1630 192 49 3 chr5 16647814 16648101 -186437431 - AluJo SINE Alu -12 300 1 222 195 39 65 chr5 16648130 16648207 -186437325 + MIR3 SINE MIR 130 204 -4 2157 97 13 13 chr5 16648949 16649247 -186436285 + AluSp SINE Alu 1 298 -15 2046 80 0 0 chr5 16649250 16649523 -186436009 + AluY SINE Alu 32 304 0 227 325 197 21 chr5 16649998 16650186 -186435346 - MIR SINE MIR -12 250 30 23 0 0 0 chr5 16650368 16650391 -186435141 + AT_rich Low_complexity Low_complexity 1 23 0 221 265 0 0 chr5 16650905 16650954 -186434578 + CT-rich Low_complexity Low_complexity 3 51 0 181 345 12 12 chr5 16651840 16651924 -186433608 - L2 LINE L2 -1 3271 3188 22 0 0 0 chr5 16652153 16652175 -186433357 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 16652479 16652528 -186433004 + AT_rich Low_complexity Low_complexity 1 49 0 258 311 126 38 chr5 16653541 16653724 -186431808 + L2 LINE L2 2606 2804 -510 2101 122 7 0 chr5 16654001 16654289 -186431243 + AluSg SINE Alu 1 290 -20 386 307 36 115 chr5 16654512 16654955 -186430577 + L2 LINE L2 2865 3272 0 2667 129 55 0 chr5 16654969 16655371 -186430161 - MSTB LTR MaLR -2 424 1 2211 147 39 0 chr5 16655371 16655760 -186429772 - MSTB-int LTR MaLR 0 1651 1248 1220 228 54 0 chr5 16656109 16656407 -186429125 + MER58B DNA MER1_type 1 314 -27 1491 171 87 7 chr5 16659281 16659567 -186425965 + AluJb SINE Alu 3 311 -1 633 282 89 4 chr5 16660088 16660336 -186425196 - HAL1 LINE L1 -1814 693 425 309 181 14 28 chr5 16660341 16660413 -186425119 - HAL1 LINE L1 -2234 273 203 483 282 20 0 chr5 16660426 16660575 -186424957 - HAL1 LINE L1 -2355 152 1 289 267 118 30 chr5 16661594 16661729 -186423803 + MIR3 SINE MIR 21 167 -41 26 30 0 0 chr5 16661912 16661945 -186423587 + AT_rich Low_complexity Low_complexity 1 33 0 1198 158 48 0 chr5 16663960 16664169 -186421363 - MER20 DNA MER1_type 0 219 1 316 265 29 0 chr5 16664773 16664875 -186420657 + (TCTCTG)n Simple_repeat Simple_repeat 1 105 0 2342 126 11 0 chr5 16666103 16666467 -186419065 - L1PB1 LINE L1 -2 6149 5782 327 241 23 23 chr5 16666467 16666554 -186418978 - L1MC4 LINE L1 -1340 6702 6616 310 287 0 21 chr5 16666479 16666573 -186418959 + L1MC4 LINE L1 6615 6706 -1336 * 348 248 0 0 chr5 16666575 16666724 -186418808 + (TA)n Simple_repeat Simple_repeat 1 149 0 325 214 0 82 chr5 16666734 16666832 -186418700 - L1MC4 LINE L1 -1339 6703 6614 9007 187 25 13 chr5 16666854 16669545 -186415987 - L1P5 LINE L1 -369 6498 3774 1787 183 87 3 chr5 16669554 16670160 -186415372 - L1P5 LINE L1 -5162 1701 901 797 279 8 0 chr5 16670159 16670421 -186415111 - L1P5 LINE L1 -6593 270 7 * 239 57 0 0 chr5 16670492 16670527 -186415005 - L1MA1 LINE L1 -120 6182 6148 40 21 0 0 chr5 16670538 16670585 -186414947 + AT_rich Low_complexity Low_complexity 1 47 0 292 210 0 32 chr5 16671086 16671148 -186414384 + L2 LINE L2 3254 3313 0 207 139 0 0 chr5 16671446 16671482 -186414050 + (T)n Simple_repeat Simple_repeat 1 36 0 418 313 30 8 chr5 16672066 16672197 -186413335 - MIR SINE MIR -104 158 25 3629 155 32 60 chr5 16672289 16673095 -186412437 - LTR1 LTR ERV1 -1 784 1 1255 208 46 74 chr5 16673895 16674356 -186411176 - MLT1C LTR MaLR -16 451 4 2033 131 25 68 chr5 16674471 16674660 -186410872 - L1MA8 LINE L1 -2 6289 6093 2257 87 3 10 chr5 16674660 16674959 -186410573 + AluY SINE Alu 1 297 -14 2033 131 25 68 chr5 16674959 16675213 -186410319 - L1MA8 LINE L1 -198 6093 5865 250 272 22 22 chr5 16676025 16676117 -186409415 - MLT1J1 LTR MaLR -289 157 66 365 307 58 117 chr5 16676297 16676476 -186409056 - L2 LINE L2 -2480 834 646 798 255 57 9 chr5 16676476 16676688 -186408844 + MIR SINE MIR 7 228 -34 365 307 58 117 chr5 16676688 16676932 -186408600 - L2 LINE L2 -2668 646 237 188 302 56 71 chr5 16677174 16677300 -186408232 + L2 LINE L2 2380 2503 -811 2235 116 0 7 chr5 16680235 16680536 -186404996 - AluSg SINE Alu -11 299 1 427 358 116 20 chr5 16680542 16680844 -186404688 - L2 LINE L2 0 3272 2942 328 326 57 14 chr5 16680856 16680997 -186404535 - L2 LINE L2 -6 3307 3161 2919 208 40 3 chr5 16681005 16681626 -186403906 - MER82 DNA MER2_type -8 645 2 1676 211 47 23 chr5 16681685 16682069 -186403463 - MSTD LTR MaLR 0 396 4 206 220 17 51 chr5 16682582 16682641 -186402891 + L2 LINE L2 3255 3311 -2 399 183 0 0 chr5 16684077 16684159 -186401373 + (TG)n Simple_repeat Simple_repeat 1 82 0 588 302 53 26 chr5 16684199 16684388 -186401144 - MIR SINE MIR -18 244 51 479 270 60 30 chr5 16684885 16685085 -186400447 + MIR SINE MIR 3 208 -54 915 196 37 28 chr5 16686216 16686430 -186399102 - MER20 DNA MER1_type -1 218 3 619 205 60 7 chr5 16686947 16687098 -186398434 + MER69A DNA AcHobo 19 177 0 23 78 0 0 chr5 16688568 16688619 -186396913 + AT_rich Low_complexity Low_complexity 1 51 0 309 314 57 0 chr5 16688650 16688755 -186396777 + L1ME LINE L1 5513 5623 -498 292 284 52 52 chr5 16690105 16690221 -186395311 - L2 LINE L2 0 3272 3157 1756 131 57 41 chr5 16690271 16690638 -186394894 - THE1C LTR MaLR 0 375 3 9049 131 47 36 chr5 16690640 16692201 -186393331 - THE1C-int LTR MaLR 0 1580 3 1396 142 112 30 chr5 16692205 16692547 -186392985 - THE1C LTR MaLR -2 426 1 533 165 23 23 chr5 16692761 16692894 -186392638 - L1MA7 LINE L1 -3 6288 6156 894 154 0 0 chr5 16692909 16693071 -186392461 - L1MA6 LINE L1 -5 6295 6134 225 313 72 0 chr5 16693485 16693568 -186391964 - L2 LINE L2 -229 3084 2996 1775 82 50 14 chr5 16693993 16694274 -186391258 + L1MA3 LINE L1 6015 6305 0 457 292 46 29 chr5 16698093 16698305 -186387227 + MIR SINE MIR 2 218 -44 1871 168 31 11 chr5 16698433 16698791 -186386741 + MLT1A1 LTR MaLR 1 365 0 414 237 178 13 chr5 16699250 16699402 -186386130 + MER5B DNA MER1_type 2 178 0 1548 117 17 176 chr5 16699411 16699814 -186385718 + MER44D DNA MER2_type 1 609 0 436 296 66 13 chr5 16700147 16700299 -186385233 - MER5A DNA MER1_type 0 189 30 2039 235 87 17 chr5 16700314 16700833 -186384699 - L1M4c LINE L1 -3656 3301 2819 2171 186 104 8 chr5 16700833 16701302 -186384230 + MER67D LTR ERV1 1 514 0 2039 235 87 17 chr5 16701302 16701746 -186383786 - L1M4c LINE L1 -4138 2819 2321 409 224 0 0 chr5 16702158 16702234 -186383298 - MER2 DNA MER2_type -3 342 267 769 188 0 8 chr5 16702287 16702420 -186383112 - MER2 DNA MER2_type -213 132 1 1568 206 124 16 chr5 16702612 16703063 -186382469 - MLT1D LTR MaLR 0 505 6 414 39 0 0 chr5 16703211 16703263 -186382269 + (CAT)n Simple_repeat Simple_repeat 1 52 0 377 319 0 0 chr5 16703327 16703421 -186382111 + MER5A DNA MER1_type 12 105 -84 512 234 120 33 chr5 16703472 16703656 -186381876 - MIR SINE MIR -50 212 13 1285 190 16 71 chr5 16704500 16704514 -186381018 + AluJo SINE Alu 1 14 -298 2300 98 47 36 chr5 16704514 16704873 -186380659 - THE1B LTR MaLR 0 364 2 1285 190 16 71 chr5 16704873 16705168 -186380364 + AluJo SINE Alu 14 293 -19 297 267 103 26 chr5 16705403 16705519 -186380013 - MIR SINE MIR -70 192 68 2355 49 0 7 chr5 16706742 16707078 -186378454 - AluY SINE Alu 0 334 1 405 230 31 42 chr5 16707321 16707500 -186378032 - L1M4c LINE L1 -4563 2315 2136 1782 157 67 14 chr5 16707500 16707856 -186377676 + THE1C LTR MaLR 1 375 0 405 230 31 42 chr5 16707856 16707872 -186377660 - L1M4c LINE L1 -4742 2136 1721 332 213 0 54 chr5 16707879 16707994 -186377538 - L1M4c LINE L1 -5062 1895 1679 2186 197 22 9 chr5 16708000 16708180 -186377352 + MLT1C LTR MaLR 1 177 -290 3353 80 18 7 chr5 16708180 16708628 -186376904 + MLT2A2 LTR ERVL 1 453 0 2186 197 22 9 chr5 16708628 16708908 -186376624 + MLT1C LTR MaLR 177 467 0 446 158 55 24 chr5 16708914 16709041 -186376491 - L1M4c LINE L1 -5179 1680 1550 1377 111 0 18 chr5 16709041 16709266 -186376266 - L1PA13 LINE L1 0 6163 5943 2372 142 23 40 chr5 16709274 16709715 -186375817 + L1P4 LINE L1 4861 5297 -866 1987 42 23 8 chr5 16709715 16709956 -186375576 + L1PA4 LINE L1 5887 6152 -3 2372 142 23 40 chr5 16709956 16710258 -186375274 + L1P4 LINE L1 5297 5603 -560 1157 204 21 71 chr5 16710261 16710639 -186374893 - L1M4c LINE L1 -5296 1563 1205 513 288 33 66 chr5 16711252 16711526 -186374006 - L1M4c LINE L1 -5914 945 681 1536 298 58 12 chr5 16711527 16712118 -186373414 - L1M4c LINE L1 -6231 628 11 209 348 116 34 chr5 16712453 16712660 -186372872 - L2 LINE L2 -24 3248 3025 455 299 118 16 chr5 16713295 16713482 -186372050 - MIR SINE MIR -23 239 34 22 0 0 0 chr5 16714413 16714435 -186371097 + AT_rich Low_complexity Low_complexity 1 22 0 262 235 29 39 chr5 16715019 16715121 -186370411 + CT-rich Low_complexity Low_complexity 1 101 0 288 0 0 0 chr5 16715459 16715491 -186370041 + (TG)n Simple_repeat Simple_repeat 1 32 0 402 267 67 0 chr5 16716991 16717096 -186368436 + MIR SINE MIR 81 192 -70 1720 38 0 0 chr5 16717785 16717995 -186367537 - L1PA4 LINE L1 0 6155 5946 2035 216 29 86 chr5 16718146 16718771 -186366761 + MLT1E LTR MaLR 5 593 0 231 190 0 0 chr5 16719464 16719522 -186366010 + A-rich Low_complexity Low_complexity 1 58 0 43 0 0 0 chr5 16719548 16719591 -186365941 + AT_rich Low_complexity Low_complexity 1 43 0 399 281 33 0 chr5 16721002 16721123 -186364409 + MER90 LTR ERV1 451 575 0 1509 234 87 15 chr5 16721129 16721671 -186363861 - L1ME3A LINE L1 -85 6085 5505 446 313 8 8 chr5 16721672 16721803 -186363729 + MER5B DNA MER1_type 48 178 0 417 207 31 56 chr5 16722279 16722416 -186363116 - L1PA8A LINE L1 -636 5495 5367 2134 101 3 7 chr5 16722416 16722714 -186362818 - AluY SINE Alu -14 297 1 417 207 31 56 chr5 16722714 16722739 -186362793 - L1PA8A LINE L1 -764 5367 5343 216 298 0 0 chr5 16722781 16722828 -186362704 + MIR SINE MIR 48 94 -168 21 36 0 0 chr5 16722924 16722952 -186362580 + AT_rich Low_complexity Low_complexity 1 28 0 207 293 19 47 chr5 16723143 16723249 -186362283 - MIR SINE MIR -129 133 31 262 256 207 0 chr5 16723455 16723537 -186361995 - L2 LINE L2 -17 3255 3157 284 48 24 0 chr5 16723602 16723644 -186361888 + (TG)n Simple_repeat Simple_repeat 2 44 0 517 312 177 48 chr5 16724540 16725299 -186360233 + L2 LINE L2 1985 2870 -444 1925 164 0 10 chr5 16725299 16725597 -186359935 - AluSx SINE Alu -17 295 1 517 312 177 48 chr5 16725597 16725703 -186359829 + L2 LINE L2 2870 2961 -353 25 0 0 0 chr5 16726017 16726042 -186359490 + AT_rich Low_complexity Low_complexity 1 25 0 1022 247 30 13 chr5 16726864 16727099 -186358433 - MIR SINE MIR -1 261 23 2189 134 8 35 chr5 16727179 16727553 -186357979 - THE1B LTR MaLR 0 364 1 11454 92 17 3 chr5 16727553 16729110 -186356422 - THE1B-int LTR MaLR 0 1580 1 2177 133 8 37 chr5 16729110 16729485 -186356047 - THE1B LTR MaLR 0 364 1 350 317 49 75 chr5 16730183 16730448 -186355084 + MIR SINE MIR 5 262 0 234 265 0 0 chr5 16730611 16730660 -186354872 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 429 344 69 45 chr5 16730660 16730951 -186354581 - L2 LINE L2 -5 3267 2970 747 250 37 14 chr5 16731232 16731448 -186354084 + LTR16C LTR ERVL 271 491 0 469 236 172 6 chr5 16731499 16731656 -186353876 + MLT2E LTR ERVL 31 213 -415 621 219 7 7 chr5 16731737 16731888 -186353644 + MLT2E LTR ERVL 472 622 -6 573 289 124 30 chr5 16731926 16732127 -186353405 - MIR SINE MIR -18 244 25 2418 204 32 6 chr5 16732370 16732869 -186352663 + MLT2B1 LTR ERVL 1 512 -8 1986 157 31 9 chr5 16732898 16733248 -186352284 - THE1B LTR MaLR -2 362 5 297 344 60 33 chr5 16733250 16733433 -186352099 - MIR SINE MIR -53 209 22 405 271 69 78 chr5 16735334 16735552 -186349980 + MLT1J LTR MaLR 256 471 -40 904 298 127 26 chr5 16735581 16736081 -186349451 + L2 LINE L2 2764 3313 0 762 305 34 17 chr5 16737233 16737472 -186348060 + MIR SINE MIR 3 245 -17 2708 118 7 41 chr5 16738374 16738816 -186346716 - MSTA LTR MaLR -1 427 1 26 98 0 0 chr5 16738965 16739047 -186346485 + AT_rich Low_complexity Low_complexity 1 82 0 27 29 0 0 chr5 16739469 16739503 -186346029 + AT_rich Low_complexity Low_complexity 1 34 0 371 258 11 0 chr5 16740243 16740332 -186345200 + MIR SINE MIR 1 90 -172 1929 128 11 4 chr5 16741054 16741335 -186344197 + AluSx SINE Alu 3 285 -27 360 70 35 0 chr5 16742308 16742365 -186343167 - MADE1 DNA Mariner 0 80 22 2255 172 28 15 chr5 16743015 16743481 -186342051 - L1MA8 LINE L1 -5 6286 5815 1573 46 0 0 chr5 16743483 16743677 -186341855 + L1PA4 LINE L1 5962 6155 0 27 0 0 0 chr5 16743706 16743733 -186341799 + AT_rich Low_complexity Low_complexity 1 27 0 1586 138 11 0 chr5 16743737 16744012 -186341520 - L1MA8 LINE L1 -486 5805 5528 234 281 16 0 chr5 16744034 16744098 -186341434 + L2 LINE L2 2280 2344 -970 248 216 21 93 chr5 16744166 16744263 -186341269 + L2 LINE L2 3158 3247 -66 314 141 0 16 chr5 16744277 16744341 -186341191 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 212 83 0 28 chr5 16744642 16744678 -186340854 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 21 0 0 0 chr5 16744730 16744751 -186340781 + AT_rich Low_complexity Low_complexity 1 21 0 2076 125 42 33 chr5 16744991 16745352 -186340180 - THE1B LTR MaLR 0 364 1 191 320 24 40 chr5 16745595 16745720 -186339812 - MER5A DNA MER1_type -4 185 63 21 36 0 0 chr5 16746231 16746259 -186339273 + AT_rich Low_complexity Low_complexity 1 28 0 375 185 0 0 chr5 16746333 16746398 -186339134 + Tigger2 DNA MER2_type 5 69 -2649 774 271 0 0 chr5 16746433 16746610 -186338922 - MER8 DNA MER2_type -62 177 1 248 68 0 23 chr5 16746611 16746655 -186338877 + (CA)n Simple_repeat Simple_repeat 2 44 0 891 270 102 47 chr5 16746723 16747215 -186338317 - LTR33A LTR ERVL -4 519 1 319 340 93 15 chr5 16747541 16747800 -186337732 + L2 LINE L2 1790 2068 -1246 4661 165 30 25 chr5 16747801 16749420 -186336112 - L1PA15 LINE L1 0 6165 4532 228 343 59 62 chr5 16749425 16749746 -186335786 + L2 LINE L2 2076 2395 -919 1881 180 8 8 chr5 16749853 16750214 -186335318 + MLT1A1 LTR MaLR 2 362 -3 290 278 56 0 chr5 16750263 16750335 -186335197 + L2 LINE L2 3151 3226 -46 2167 137 0 0 chr5 16750563 16750869 -186334663 - AluSx SINE Alu -6 306 1 2174 113 0 0 chr5 16751124 16751139 -186334393 - AluSc SINE Alu -17 292 278 207 0 0 0 chr5 16751139 16751162 -186334370 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2174 113 0 0 chr5 16751162 16751438 -186334094 - AluSc SINE Alu -30 279 1 1461 181 0 19 chr5 16751939 16752199 -186333333 - AluJo SINE Alu -16 296 42 3328 166 48 21 chr5 16752206 16752916 -186332616 - L1PB4 LINE L1 -1 6155 5427 1033 104 38 47 chr5 16753038 16753295 -186332237 - L1M LINE L1 -762 5384 5163 2088 181 36 90 chr5 16753318 16753904 -186331628 + MLT2B3 LTR ERVL 1 554 0 204 200 18 18 chr5 16756213 16756268 -186329264 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 3259 173 74 28 chr5 16757283 16758010 -186327522 - LTR48 LTR ERV1 0 787 27 374 354 38 14 chr5 16758800 16759012 -186326520 - L2 LINE L2 -554 2760 2544 200 209 0 0 chr5 16759016 16759059 -186326473 + (ACTAG)n Simple_repeat Simple_repeat 5 47 0 240 330 52 21 chr5 16759082 16759179 -186326353 - L2 LINE L2 -776 2538 2439 266 280 0 21 chr5 16759187 16759280 -186326252 - L2 LINE L2 -1296 2018 1928 211 353 0 14 chr5 16760012 16760098 -186325434 + MIR SINE MIR 77 162 -46 6884 121 14 16 chr5 16760353 16765992 -186319540 - L1PA8 LINE L1 -15 6472 768 853 116 0 0 chr5 16765985 16766106 -186319426 - L1PA8 LINE L1 -6330 131 11 * 1550 182 69 21 chr5 16766293 16766584 -186318948 - AluJb SINE Alu -7 305 1 2209 111 7 3 chr5 16767133 16767430 -186318102 + AluSx SINE Alu 1 298 -14 364 307 93 0 chr5 16767438 16767578 -186317954 + MIR3 SINE MIR 44 196 -12 183 374 24 0 chr5 16767887 16767970 -186317562 + MIR SINE MIR 2 86 -176 515 281 8 48 chr5 16770377 16770626 -186314906 - HAL1 LINE L1 -17 2490 2252 307 280 84 21 chr5 16770627 16770770 -186314762 - HAL1 LINE L1 -833 1674 1523 241 253 182 0 chr5 16770817 16770987 -186314545 - HAL1 LINE L1 -1058 1449 1249 5463 117 15 9 chr5 16771075 16771947 -186313585 - L1MA3 LINE L1 -8 6297 5421 3009 185 23 19 chr5 16771947 16772609 -186312923 - L1MB1 LINE L1 -240 5928 5260 1324 166 40 68 chr5 16773053 16773349 -186312183 - AluJb SINE Alu -7 305 18 657 191 77 10 chr5 16773659 16773868 -186311664 + MER69 DNA AcHobo 2294 2516 -10 262 408 0 0 chr5 16773892 16773995 -186311537 + L2 LINE L2 3145 3247 -25 189 317 8 98 chr5 16774243 16774289 -186311243 + MIR SINE MIR 110 159 -103 1657 170 60 7 chr5 16774289 16774571 -186310961 + AluJo SINE Alu 9 305 -7 189 317 8 98 chr5 16774571 16774647 -186310885 + MIR SINE MIR 159 221 -41 1996 118 50 68 chr5 16775094 16775476 -186310056 - THE1C LTR MaLR 0 375 1 210 71 0 0 chr5 16775777 16775805 -186309727 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 22 0 0 0 chr5 16775954 16775976 -186309556 + AT_rich Low_complexity Low_complexity 1 22 0 210 301 150 9 chr5 16776032 16776145 -186309387 - L2 LINE L2 0 3313 3185 1141 212 58 69 chr5 16777762 16778224 -186307308 - LTR16A1 LTR ERVL 0 457 1 412 271 42 42 chr5 16778723 16779066 -186306466 + MLT1J1 LTR MaLR 63 446 0 1045 269 37 50 chr5 16780553 16781095 -186304437 + L1MC5 LINE L1 5255 5789 -2019 644 261 55 100 chr5 16781729 16781897 -186303635 + L1MC5 LINE L1 6668 6842 -1119 1507 187 21 28 chr5 16781897 16782181 -186303351 + AluJb SINE Alu 5 286 -26 644 261 55 100 chr5 16782181 16782561 -186302971 + L1MC5 LINE L1 6842 7191 -770 622 272 24 70 chr5 16782740 16782928 -186302604 + L1MDa LINE L1 64 228 -6312 2323 101 48 31 chr5 16782928 16783286 -186302246 + THE1B LTR MaLR 1 364 0 622 272 24 70 chr5 16783286 16783468 -186302064 + L1MDa LINE L1 228 417 -6123 534 230 105 52 chr5 16783616 16783864 -186301668 - L1MC4a LINE L1 -1623 6185 5925 490 272 117 10 chr5 16784021 16784227 -186301305 - MIR SINE MIR -19 243 16 488 315 84 60 chr5 16786455 16786906 -186298626 + L2 LINE L2 2811 3272 0 1534 132 0 0 chr5 16787335 16787555 -186297977 + AluSg/x SINE Alu 83 302 -10 270 0 0 0 chr5 16787619 16787649 -186297883 + (TG)n Simple_repeat Simple_repeat 2 31 0 225 373 60 7 chr5 16789432 16789582 -186295950 + L2 LINE L2 3151 3308 -5 2318 110 0 0 chr5 16789910 16790211 -186295321 - AluSx SINE Alu -11 301 1 24 32 0 0 chr5 16790898 16790929 -186294603 + AT_rich Low_complexity Low_complexity 1 31 0 641 285 113 88 chr5 16791256 16792318 -186293214 + L1ME LINE L1 4479 5561 -560 577 62 62 0 chr5 16792374 16792495 -186293037 + L1PA5 LINE L1 6051 6176 0 1033 191 84 82 chr5 16792545 16792731 -186292801 - LTR52 LTR ERVL -6 415 231 1518 64 5 20 chr5 16792731 16792935 -186292597 + L1PA10 LINE L1 5964 6164 -4 1033 191 84 82 chr5 16792935 16793162 -186292370 - LTR52 LTR ERVL -190 231 1 362 255 9 19 chr5 16794123 16794229 -186291303 - MIR SINE MIR -127 135 31 2368 97 3 0 chr5 16794308 16794617 -186290915 - AluSx SINE Alu -2 310 1 1132 198 46 73 chr5 16794654 16795022 -186290510 - LTR47B LTR ERVL -85 358 1 364 170 27 125 chr5 16795073 16795185 -186290347 - L1PA16 LINE L1 -9 6157 6057 * 2917 200 3 2 chr5 16795182 16795817 -186289715 + L1 LINE L1 4394 5029 -1117 456 279 188 26 chr5 16797925 16798233 -186287299 + L2 LINE L2 2956 3313 0 25 0 0 0 chr5 16798581 16798606 -186286926 + AT_rich Low_complexity Low_complexity 1 25 0 1540 184 146 82 chr5 16799259 16799780 -186285752 - MLT2B3 LTR ERVL 0 554 1 3646 98 217 116 chr5 16799964 16801366 -186284166 - pTR5 LTR ERV1 0 2438 743 40 21 0 0 chr5 16801770 16801817 -186283715 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr5 16803568 16803592 -186281940 + AT_rich Low_complexity Low_complexity 1 24 0 1906 140 31 0 chr5 16804368 16804660 -186280872 - AluSx SINE Alu -11 301 1 216 326 134 44 chr5 16808292 16808902 -186276630 + L2 LINE L2 1359 2023 -1291 285 337 43 43 chr5 16810695 16810781 -186274751 + MIR SINE MIR 51 139 -123 1700 161 67 78 chr5 16810781 16811217 -186274315 - MSTB1 LTR MaLR -1 431 1 285 337 43 43 chr5 16811217 16811293 -186274239 + MIR SINE MIR 138 213 -49 1398 256 62 22 chr5 16811299 16811848 -186273684 - MLT1F1 LTR MaLR 0 567 1 200 361 8 54 chr5 16812244 16812374 -186273158 - L2 LINE L2 -211 3061 2938 817 202 67 29 chr5 16812419 16812627 -186272905 + MER58A DNA MER1_type 9 224 0 1992 143 6 34 chr5 16813470 16813791 -186271741 - AluSx SINE Alu 0 312 1 2140 132 48 28 chr5 16814121 16814478 -186271054 - THE1B LTR MaLR 0 364 1 2014 189 18 73 chr5 16814529 16814856 -186270676 - L1MC3 LINE L1 0 7785 7504 2035 151 19 24 chr5 16814856 16815233 -186270299 - THE1C LTR MaLR 0 375 1 2014 189 18 73 chr5 16815233 16815504 -186270028 - L1MC3 LINE L1 -281 7504 7220 426 145 48 0 chr5 16815501 16815584 -186269948 - L1MC3 LINE L1 -781 7004 6918 * 225 116 0 0 chr5 16815599 16815642 -186269890 - LTR66 LTR ERVL -174 436 394 * 283 191 0 0 chr5 16815605 16815673 -186269859 + LTR66 LTR ERVL 395 462 -148 6672 196 54 14 chr5 16815673 16817614 -186267918 - L1MC3 LINE L1 -743 5403 4815 2197 75 0 3 chr5 16817626 16817921 -186267611 - L1PA10 LINE L1 -14 6154 5861 1541 130 0 0 chr5 16817921 16818159 -186267373 + L1P4 LINE L1 5479 5716 -452 * 2422 248 65 16 chr5 16818139 16819044 -186266488 - L1MC3 LINE L1 -1313 4833 3884 216 97 0 0 chr5 16819227 16819258 -186266274 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 267 54 0 0 chr5 16819748 16819785 -186265747 + (CA)n Simple_repeat Simple_repeat 2 38 0 2056 189 30 69 chr5 16821171 16821387 -186264145 + MLT1D LTR MaLR 1 224 -281 2003 172 12 10 chr5 16821387 16821788 -186263744 + L1MA4 LINE L1 5893 6294 -6 2056 189 30 69 chr5 16821788 16822096 -186263436 + MLT1D LTR MaLR 224 505 0 207 0 0 0 chr5 16823038 16823061 -186262471 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 2168 83 14 3 chr5 16823528 16823816 -186261716 + AluY SINE Alu 1 291 -20 1622 118 7 0 chr5 16824409 16824681 -186260851 - L1MA2 LINE L1 0 6304 6031 853 151 0 8 chr5 16824925 16825051 -186260481 - FLAM_C SINE Alu -18 125 1 709 108 0 17 chr5 16825110 16825230 -186260302 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 449 269 102 12 chr5 16826568 16826735 -186258797 - MLT1L LTR MaLR -4 611 430 704 276 6 0 chr5 16826970 16827126 -186258406 + MER5A DNA MER1_type 2 158 -31 1488 236 110 70 chr5 16828082 16828683 -186256849 - MLT1E1 LTR MaLR -29 625 1 1352 175 119 26 chr5 16829794 16830182 -186255350 + MLT1C LTR MaLR 44 467 0 25 0 0 0 chr5 16830716 16830741 -186254791 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 16831928 16831967 -186253565 + AT_rich Low_complexity Low_complexity 1 39 0 227 279 87 19 chr5 16832073 16832177 -186253355 - MIR SINE MIR -35 227 117 538 274 142 47 chr5 16832206 16832545 -186252987 - MLT1J2 LTR MaLR -8 442 72 27 0 0 0 chr5 16832701 16832728 -186252804 + AT_rich Low_complexity Low_complexity 1 27 0 346 295 0 19 chr5 16833476 16833581 -186251951 - L2 LINE L2 -8 3264 3162 684 245 77 10 chr5 16834681 16834889 -186250643 + MLT1G LTR MaLR 369 590 0 24 0 0 0 chr5 16835385 16835409 -186250123 + AT_rich Low_complexity Low_complexity 1 24 0 957 193 65 103 chr5 16835691 16836136 -186249396 - LTR8A LTR ERV1 -13 714 287 685 176 154 147 chr5 16836174 16836453 -186249079 - LTR8 LTR ERV1 -446 281 1 238 314 0 0 chr5 16837075 16837145 -186248387 + MLT1E1 LTR MaLR 1 70 -584 1051 233 101 3 chr5 16837262 16837550 -186247982 + MLT1E2 LTR MaLR 303 618 -8 2150 186 94 34 chr5 16838315 16838900 -186246632 + Cheshire DNA MER1_type 1782 2401 -19 420 276 120 100 chr5 16838924 16839414 -186246118 + L2 LINE L2 2811 3310 -3 1072 311 73 31 chr5 16840111 16840156 -186245376 - MER115 DNA AcHobo -28 665 623 1927 138 31 56 chr5 16840156 16840512 -186245020 - MER7A DNA MER2_type 0 346 2 1072 311 73 31 chr5 16840512 16840948 -186244584 - MER115 DNA AcHobo -70 623 164 780 179 50 0 chr5 16840947 16841113 -186244419 - MER58B DNA MER1_type -8 333 157 * 522 218 21 28 chr5 16841424 16841566 -186243966 - L2 LINE L2 -702 2612 2472 1789 216 39 28 chr5 16841608 16842070 -186243462 - MLT1C LTR MaLR 0 467 1 207 0 0 0 chr5 16842488 16842511 -186243021 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1036 168 0 6 chr5 16842924 16843091 -186242441 - AluJo SINE Alu -22 290 125 21 0 0 0 chr5 16844064 16844085 -186241447 + AT_rich Low_complexity Low_complexity 1 21 0 580 234 71 50 chr5 16844297 16844497 -186241035 - L1MDa LINE L1 -5764 776 449 1379 245 58 41 chr5 16844663 16845129 -186240403 - MLT1E2 LTR MaLR -2 624 151 667 275 66 30 chr5 16845408 16845713 -186239819 - MLT1J2 LTR MaLR -129 321 6 25 31 0 0 chr5 16846459 16846491 -186239041 + AT_rich Low_complexity Low_complexity 1 32 0 2374 83 0 13 chr5 16847596 16847896 -186237636 + AluY SINE Alu 1 296 -15 412 272 177 7 chr5 16847896 16848043 -186237489 + MER5A DNA MER1_type 17 188 -1 186 43 0 0 chr5 16848077 16848100 -186237432 + (CA)n Simple_repeat Simple_repeat 2 24 0 3977 152 6 13 chr5 16848914 16849546 -186235986 + LTR48B LTR ERV1 1 628 -16 202 255 79 26 chr5 16850810 16850921 -186234611 - MIR SINE MIR -64 144 56 375 268 84 21 chr5 16850958 16851100 -186234432 + MIR SINE MIR 30 180 -82 686 322 62 11 chr5 16851525 16851798 -186233734 + LTR16A1 LTR ERVL 49 335 -122 1749 167 75 56 chr5 16851798 16852184 -186233348 - MSTA LTR MaLR 0 428 34 257 276 57 9 chr5 16852197 16852302 -186233230 + LTR16A1 LTR ERVL 348 457 0 2822 152 56 51 chr5 16852571 16852606 -186232926 - MER67C LTR ERV1 -1 709 676 1774 199 38 30 chr5 16852606 16852977 -186232555 + MLT1A2 LTR MaLR 1 374 0 2822 152 56 51 chr5 16852977 16853513 -186232019 - MER67C LTR ERV1 -34 676 135 796 177 8 0 chr5 16853514 16853638 -186231894 - FLAM_C SINE Alu -17 126 2 671 204 62 0 chr5 16853639 16853801 -186231731 - MER67C LTR ERV1 -538 172 1 839 149 39 72 chr5 16854125 16854304 -186231228 - LTR8A LTR ERV1 0 727 555 1935 163 18 127 chr5 16854304 16854856 -186230676 + LTR22B LTR ERVK 1 492 0 2675 132 108 32 chr5 16854912 16855413 -186230119 - LTR8A LTR ERV1 -188 539 1 298 275 88 0 chr5 16855775 16855866 -186229666 - MIR SINE MIR -62 146 48 4014 128 62 3 chr5 16856010 16856119 -186229413 - LTR9 LTR ERV1 0 612 511 185 0 0 39 chr5 16856119 16856145 -186229387 + (GAGAA)n Simple_repeat Simple_repeat 2 26 0 4014 128 62 3 chr5 16856145 16856613 -186228919 - LTR9 LTR ERV1 -101 511 1 257 269 0 54 chr5 16856626 16856719 -186228813 - MER112 DNA MER1_type -17 243 156 542 150 110 24 chr5 16856734 16856861 -186228671 + L1MA8 LINE L1 6148 6285 -6 283 231 77 0 chr5 16856877 16856955 -186228577 - MER112 DNA MER1_type -103 157 74 367 328 63 11 chr5 16856986 16857160 -186228372 - MIR3 SINE MIR -19 189 7 201 39 0 0 chr5 16857587 16857613 -186227919 + (GGCTG)n Simple_repeat Simple_repeat 1 26 0 285 215 15 15 chr5 16857653 16857718 -186227814 + MIR SINE MIR 89 153 -109 855 129 29 0 chr5 16857996 16858135 -186227397 + L1MC3 LINE L1 6905 7047 -738 1787 131 3 77 chr5 16858141 16858514 -186227018 - MER4A LTR ERV1 0 664 261 514 161 54 0 chr5 16858514 16858607 -186226925 - MER4A LTR ERV1 -566 98 1 2511 172 203 20 chr5 16858607 16858980 -186226552 + L1MC3 LINE L1 7038 7341 -444 2440 71 3 0 chr5 16858980 16859277 -186226255 - AluSc SINE Alu -11 298 1 2511 172 203 20 chr5 16859277 16859513 -186226019 + L1MC3 LINE L1 7341 7759 -26 234 279 293 7 chr5 16859779 16859926 -186225606 - L2 LINE L2 -923 2391 2203 216 365 31 0 chr5 16860018 16860114 -186225418 + MIR SINE MIR 56 154 -108 313 314 66 15 chr5 16861603 16861740 -186223792 + MIR SINE MIR 47 190 -72 2714 74 19 93 chr5 16862091 16862173 -186223359 - MLT2A1 LTR ERVL 0 444 357 315 0 0 0 chr5 16862173 16862208 -186223324 + (CA)n Simple_repeat Simple_repeat 2 36 0 2714 74 19 93 chr5 16862208 16862597 -186222935 - MLT2A1 LTR ERVL -87 357 8 1675 206 90 30 chr5 16862743 16863145 -186222387 + MLT1C LTR MaLR 1 426 -41 459 223 76 76 chr5 16863185 16863342 -186222190 + L2 LINE L2 3153 3309 -4 1423 227 56 82 chr5 16863735 16863946 -186221586 - MLT1D LTR MaLR 0 505 290 2462 127 16 21 chr5 16863946 16864323 -186221209 - THE1C LTR MaLR 0 375 1 11054 117 15 30 chr5 16864323 16865927 -186219605 - THE1C-int LTR MaLR 0 1580 1 2073 124 69 36 chr5 16865927 16866290 -186219242 - THE1C LTR MaLR 0 375 1 1423 227 56 82 chr5 16866290 16866566 -186218966 - MLT1D LTR MaLR -213 292 27 450 36 0 0 chr5 16866566 16866622 -186218910 + (TG)n Simple_repeat Simple_repeat 1 56 0 1423 227 56 82 chr5 16866622 16866646 -186218886 - MLT1D LTR MaLR -478 27 4 443 268 51 25 chr5 16866892 16867049 -186218483 + MER103 DNA DNA 4 164 -2 2586 125 37 0 chr5 16867382 16867758 -186217774 + MLT1B LTR MaLR 1 390 0 1745 183 134 78 chr5 16869172 16869648 -186215884 - MLT1D LTR MaLR 0 505 3 243 319 64 14 chr5 16870844 16870985 -186214547 + MIR SINE MIR 61 208 -54 2202 97 23 19 chr5 16871773 16872083 -186213449 - AluY SINE Alu 0 311 1 228 250 29 15 chr5 16872139 16872207 -186213325 - L2 LINE L2 -16 3297 3229 1695 296 131 23 chr5 16872210 16872340 -186213192 + L2 LINE L2 2043 2158 -1155 923 222 27 40 chr5 16872340 16872565 -186212967 - MER58A DNA MER1_type 0 224 3 1695 296 131 23 chr5 16872565 16873568 -186211964 + L2 LINE L2 2158 3313 0 26 0 0 0 chr5 16874963 16874989 -186210543 + AT_rich Low_complexity Low_complexity 1 26 0 1467 176 119 62 chr5 16875042 16875411 -186210121 + MLT1B LTR MaLR 1 390 0 359 197 0 0 chr5 16875676 16875737 -186209795 + MER81 DNA DNA 53 113 -1 1078 233 152 34 chr5 16875813 16876431 -186209101 - LTR50 LTR ERVL -4 791 4 267 346 39 15 chr5 16876818 16876948 -186208584 - MIR SINE MIR -93 169 37 1021 212 55 53 chr5 16877508 16877850 -186207682 - MLT1A1 LTR MaLR -3 429 1 7043 233 57 33 chr5 16877850 16877967 -186207565 - MSTD-int LTR MaLR 0 1735 1622 2379 95 0 6 chr5 16877967 16878282 -186207250 + AluSq SINE Alu 1 313 0 7043 233 57 33 chr5 16878282 16879858 -186205674 - MSTD-int LTR MaLR -113 1622 2 1199 227 119 28 chr5 16879860 16880039 -186205493 - MSTD LTR MaLR -2 394 233 2170 133 29 35 chr5 16880039 16880415 -186205117 + THE1C LTR MaLR 2 375 0 1199 227 119 28 chr5 16880415 16880596 -186204936 - MSTD LTR MaLR -163 233 1 793 245 0 5 chr5 16880813 16880997 -186204535 + L1MA8 LINE L1 2713 2895 -3251 2355 214 43 28 chr5 16881088 16881716 -186203816 - MER49 LTR ERV1 -66 766 180 9794 199 26 31 chr5 16881728 16882320 -186203212 + L1MA8 LINE L1 2903 3496 -2795 1204 65 19 0 chr5 16882320 16882518 -186203014 + AluY SINE Alu 127 327 0 9794 199 26 31 chr5 16882518 16884313 -186201219 + L1MA8 LINE L1 3496 5318 -973 2660 101 14 14 chr5 16884313 16884668 -186200864 + THE1A LTR MaLR 1 355 0 9794 199 26 31 chr5 16884668 16885208 -186200324 + L1MA8 LINE L1 5318 5859 -432 2367 282 30 26 chr5 16885192 16885913 -186199619 + L1PA15 LINE L1 1 724 -6063 * 6191 225 13 42 chr5 16885990 16887374 -186198158 + L1PA15 LINE L1 1332 2621 -4176 2292 87 3 0 chr5 16887374 16887661 -186197871 - AluY SINE Alu -23 288 1 6191 225 13 42 chr5 16887661 16888730 -186196802 + L1PA15 LINE L1 2621 3719 -3078 5797 136 14 18 chr5 16888738 16890048 -186195484 + L1PA15 LINE L1 4826 6128 -688 2179 112 36 7 chr5 16890048 16890352 -186195180 + AluSq SINE Alu 1 313 0 5797 136 14 18 chr5 16890352 16891034 -186194498 + L1PA15 LINE L1 6128 6811 -5 216 0 0 0 chr5 16891039 16891063 -186194469 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2336 180 32 15 chr5 16891063 16891120 -186194412 + L1MA8 LINE L1 5823 5878 -413 2775 150 9 23 chr5 16891120 16891554 -186193978 - MSTC LTR MaLR 0 428 1 2336 180 32 15 chr5 16891554 16891951 -186193581 + L1MA8 LINE L1 5878 6291 0 1797 191 56 31 chr5 16892263 16892619 -186192913 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr5 16893045 16893066 -186192466 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr5 16893226 16893271 -186192261 + AT_rich Low_complexity Low_complexity 1 45 0 383 214 0 24 chr5 16893386 16893470 -186192062 - L1ME4a LINE L1 -80 6041 5960 194 297 79 10 chr5 16893509 16893610 -186191922 - MIR SINE MIR -59 149 42 270 0 0 0 chr5 16894323 16894353 -186191179 + (TA)n Simple_repeat Simple_repeat 2 31 0 1707 171 35 3 chr5 16894360 16894646 -186190886 - AluJb SINE Alu -17 295 1 830 190 68 25 chr5 16894731 16895031 -186190501 + MLT1A2 LTR MaLR 1 373 -1 733 324 52 21 chr5 16895529 16896108 -186189424 - L1ME4a LINE L1 -260 5861 5258 397 245 10 20 chr5 16898491 16898589 -186186943 + MER5B DNA MER1_type 82 178 0 424 257 151 0 chr5 16898605 16898757 -186186775 + MER5A DNA MER1_type 9 183 -6 459 284 32 13 chr5 16898819 16898974 -186186558 - MER90 LTR ERV1 -14 561 404 215 171 0 0 chr5 16899211 16899246 -186186286 - L3 LINE CR1 -611 966 932 499 288 35 53 chr5 16901251 16901477 -186184055 + MIR SINE MIR 5 226 -36 287 159 0 0 chr5 16901640 16901698 -186183834 - MLT2C1 LTR ERVL 0 397 350 1327 220 52 65 chr5 16901967 16902431 -186183101 - MLT2C2 LTR ERVL 0 464 7 196 231 83 37 chr5 16902437 16902545 -186182987 - L2 LINE L2 -226 3087 2975 360 64 0 0 chr5 16902757 16902804 -186182728 + (CA)n Simple_repeat Simple_repeat 1 47 0 243 0 0 0 chr5 16902954 16902981 -186182551 + (T)n Simple_repeat Simple_repeat 1 27 0 2260 103 60 20 chr5 16903673 16904023 -186181509 - THE1B LTR MaLR 0 364 1 11193 90 37 3 chr5 16904023 16905551 -186179981 - THE1B-int LTR MaLR 0 1580 1 2139 126 51 28 chr5 16905551 16905907 -186179625 - THE1B LTR MaLR 0 364 1 2602 141 30 2 chr5 16907049 16907518 -186178014 - L1MB2 LINE L1 -2 6169 5688 329 310 108 8 chr5 16908147 16908276 -186177256 + MIR SINE MIR 47 188 -74 635 259 99 12 chr5 16909764 16910007 -186175525 - LTR16B LTR ERVL -12 452 189 541 329 52 49 chr5 16910027 16910799 -186174733 - ERVL LTR ERVL -388 5376 4603 1265 303 38 28 chr5 16910800 16910898 -186174634 - ERVL LTR ERVL -2765 2231 2135 2028 118 55 30 chr5 16910898 16911264 -186174268 + THE1C LTR MaLR 1 375 0 1265 303 38 28 chr5 16911264 16911666 -186173866 - ERVL LTR ERVL -2861 2135 1726 2207 220 56 58 chr5 16911666 16912405 -186173127 - L1M4c LINE L1 -4703 1943 1205 4353 63 4 0 chr5 16912405 16912962 -186172570 + L1PA8 LINE L1 5606 6164 -8 2207 220 56 58 chr5 16912962 16913193 -186172339 - L1M4c LINE L1 -5441 1205 975 468 108 14 0 chr5 16913300 16913374 -186172158 - AluY SINE Alu -11 300 226 1185 105 6 0 chr5 16913374 16913536 -186171996 - AluY SINE Alu -148 163 1 2607 224 43 87 chr5 16913546 16914513 -186171019 - L1M4c LINE L1 -5613 929 5 1278 315 116 34 chr5 16914812 16916020 -186169512 + L2 LINE L2 1420 2726 -588 249 295 16 33 chr5 16916757 16916879 -186168653 + MLT1H LTR MaLR 411 530 -19 201 147 0 0 chr5 16917785 16917819 -186167713 + (TA)n Simple_repeat Simple_repeat 1 34 0 194 62 31 0 chr5 16918710 16918742 -186166790 + (TA)n Simple_repeat Simple_repeat 2 34 0 1413 208 30 30 chr5 16919519 16919880 -186165652 - MLT1A1 LTR MaLR 0 365 5 1215 176 19 85 chr5 16920096 16920415 -186165117 + MER67D LTR ERV1 14 311 -203 701 235 104 0 chr5 16920469 16920652 -186164880 + MER67D LTR ERV1 310 511 -3 1051 261 157 28 chr5 16921092 16921725 -186163807 - L2 LINE L2 0 3313 2580 715 207 36 72 chr5 16921727 16921949 -186163583 - MER20 DNA MER1_type -5 214 1 304 333 175 0 chr5 16921950 16922070 -186163462 - L2 LINE L2 -725 2589 2449 281 306 127 8 chr5 16922071 16922205 -186163327 - LTR16A LTR ERVL -300 150 1 359 280 99 74 chr5 16923329 16923465 -186162067 - MIR SINE MIR 0 262 116 1989 149 7 0 chr5 16923465 16923761 -186161771 + AluSx SINE Alu 1 298 -14 359 280 99 74 chr5 16923761 16923867 -186161665 - MIR SINE MIR -146 116 14 222 150 0 0 chr5 16924746 16924786 -186160746 + (CA)n Simple_repeat Simple_repeat 2 41 0 249 295 95 42 chr5 16926115 16926305 -186159227 + L2 LINE L2 3050 3249 -64 1522 17 0 0 chr5 16926611 16926784 -186158748 + L1PA3 LINE L1 5979 6151 -4 278 294 20 0 chr5 16927095 16927197 -186158335 + (TA)n Simple_repeat Simple_repeat 1 104 0 200 280 27 40 chr5 16928992 16929067 -186156465 - L2 LINE L2 -522 2792 2719 1006 302 40 3 chr5 16929559 16929959 -186155573 - L2 LINE L2 -252 3061 2646 189 250 0 0 chr5 16931163 16931211 -186154321 - L2 LINE L2 0 3313 3266 4029 81 9 4 chr5 16932498 16933083 -186152449 + L1PA14 LINE L1 5327 5913 -248 2099 119 19 25 chr5 16933084 16933446 -186152086 + THE1C LTR MaLR 15 374 -1 1884 86 0 0 chr5 16933446 16933702 -186151830 + L1PA14 LINE L1 5906 6161 0 22 0 0 0 chr5 16933707 16933729 -186151803 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr5 16934178 16934222 -186151310 + AT_rich Low_complexity Low_complexity 1 44 0 22 70 0 0 chr5 16934527 16934570 -186150962 + AT_rich Low_complexity Low_complexity 1 43 0 2329 60 0 7 chr5 16937298 16937605 -186147927 + AluY SINE Alu 1 305 0 18753 55 1 7 chr5 16937646 16940833 -186144699 + L1PA6 LINE L1 2970 6153 -1 2009 117 33 0 chr5 16941346 16941680 -186143852 - AluSx SINE Alu 0 343 1 1025 160 0 11 chr5 16942296 16942483 -186143049 - Tigger4(Zombi) DNA MER2_type 0 2731 2547 33 0 0 0 chr5 16942537 16942570 -186142962 + AT_rich Low_complexity Low_complexity 1 33 0 254 149 0 0 chr5 16942574 16942621 -186142911 - Tigger4(Zombi) DNA MER2_type -191 2540 2494 1280 165 41 0 chr5 16942627 16942869 -186142663 - Tigger4(Zombi) DNA MER2_type -2479 252 1 417 253 63 76 chr5 16943476 16943634 -186141898 + L2 LINE L2 3158 3313 0 365 293 66 82 chr5 16943635 16943698 -186141834 + L2 LINE L2 2444 2506 -808 2310 128 103 5 chr5 16943698 16944088 -186141444 + MSTA LTR MaLR 1 428 0 365 293 66 82 chr5 16944088 16944341 -186141191 + L2 LINE L2 2506 2755 -559 22 0 0 0 chr5 16944676 16944698 -186140834 + AT_rich Low_complexity Low_complexity 1 22 0 236 317 98 32 chr5 16945274 16945397 -186140135 - MER91C DNA MER1_type -9 131 1 203 432 0 0 chr5 16945401 16945489 -186140043 + MIR SINE MIR 31 118 -90 221 258 22 22 chr5 16945513 16945602 -186139930 + (TA)n Simple_repeat Simple_repeat 2 90 0 24 0 0 0 chr5 16945779 16945803 -186139729 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 16946701 16946723 -186138809 + AT_rich Low_complexity Low_complexity 1 22 0 312 229 110 18 chr5 16946787 16946896 -186138636 + MER94 DNA DNA 3 121 -13 249 265 1 27 chr5 16947613 16947688 -186137844 + MER21B LTR ERV1 24 125 -480 2183 119 0 0 chr5 16947832 16948125 -186137407 + AluSc SINE Alu 1 293 -16 1060 266 58 44 chr5 16948139 16948567 -186136965 + MER21B LTR ERV1 254 687 -176 1853 181 16 5 chr5 16950384 16950562 -186134970 + MLT1B LTR MaLR 1 176 -214 2321 114 13 0 chr5 16950562 16950870 -186134662 + AluSx SINE Alu 1 312 0 1853 181 16 5 chr5 16950870 16951072 -186134460 + MLT1B LTR MaLR 176 385 -5 2404 46 0 3 chr5 16951292 16951575 -186133957 + AluY SINE Alu 1 282 -29 22 0 0 0 chr5 16952028 16952050 -186133482 + AT_rich Low_complexity Low_complexity 1 22 0 2312 68 0 43 chr5 16953073 16953395 -186132137 + AluY SINE Alu 1 308 -3 3370 112 89 4 chr5 16953399 16953960 -186131572 + L1MA3 LINE L1 5697 6305 0 945 272 41 0 chr5 16954535 16954781 -186130751 - MIR SINE MIR -1 261 6 1936 177 0 0 chr5 16954921 16955220 -186130312 - AluJb SINE Alu -13 299 1 277 349 23 16 chr5 16956080 16956209 -186129323 - MER5B DNA MER1_type -48 130 1 21 0 0 0 chr5 16956644 16956665 -186128867 + AT_rich Low_complexity Low_complexity 1 21 0 181 222 0 44 chr5 16957258 16957303 -186128229 - L2 LINE L2 -2894 420 378 722 250 282 0 chr5 16957676 16957992 -186127540 - L2 LINE L2 -1 3312 2908 830 205 21 7 chr5 16957998 16958244 -186127288 + MLT1A1 LTR MaLR 5 334 -31 791 286 99 40 chr5 16958377 16958874 -186126658 - L2 LINE L2 -986 2328 1803 1150 95 0 0 chr5 16960931 16961079 -186124453 + AluSg SINE Alu 1 148 -162 477 299 120 0 chr5 16962591 16962775 -186122757 + MIR SINE MIR 47 252 -10 2388 83 0 7 chr5 16963157 16963459 -186122073 + AluSg SINE Alu 1 300 -10 798 112 112 22 chr5 16963514 16963692 -186121840 + L1MB3 LINE L1 5988 6181 -2 633 316 30 30 chr5 16964018 16964252 -186121280 - MIR SINE MIR -26 236 3 22 35 0 0 chr5 16964277 16964306 -186121226 + AT_rich Low_complexity Low_complexity 1 29 0 1457 205 47 10 chr5 16964399 16964696 -186120836 - AluJo SINE Alu -4 308 1 1984 157 3 3 chr5 16964853 16965165 -186120367 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 16966149 16966173 -186119359 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr5 16966279 16966325 -186119207 + AT_rich Low_complexity Low_complexity 1 46 0 3331 142 13 31 chr5 16967576 16967675 -186117857 + L1MB2 LINE L1 5569 5668 -503 1903 150 7 7 chr5 16967675 16967955 -186117577 + AluSx SINE Alu 2 281 -31 270 0 0 0 chr5 16967961 16967991 -186117541 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3331 142 13 31 chr5 16967991 16968498 -186117034 + L1MB2 LINE L1 5673 6171 0 2626 102 11 5 chr5 16968978 16969349 -186116183 + THE1C LTR MaLR 1 373 -2 3875 108 65 76 chr5 16969349 16970100 -186115432 + THE1C-int LTR MaLR 4 746 -834 1512 88 5 5 chr5 16970100 16970317 -186115215 + THE1C-int LTR MaLR 1364 1580 0 2621 102 16 5 chr5 16970317 16970688 -186114844 + THE1C LTR MaLR 1 375 0 1908 250 37 47 chr5 16971047 16971618 -186113914 + MLT1E LTR MaLR 29 593 0 21 0 0 0 chr5 16971927 16971948 -186113584 + AT_rich Low_complexity Low_complexity 1 21 0 392 229 83 14 chr5 16973585 16973729 -186111803 + MER103 DNA DNA 4 157 -9 343 264 101 27 chr5 16974440 16974610 -186110922 - MIR SINE MIR -52 210 30 946 92 0 14 chr5 16974635 16974777 -186110755 + L1PA13 LINE L1 6023 6162 -1 269 321 75 0 chr5 16975250 16975356 -186110176 + L2 LINE L2 3197 3310 -3 2249 107 0 13 chr5 16975773 16976072 -186109460 + AluSg SINE Alu 1 295 -15 266 254 105 27 chr5 16976173 16976297 -186109235 - MIR3 SINE MIR -49 159 25 21 0 0 0 chr5 16976841 16976862 -186108670 + AT_rich Low_complexity Low_complexity 1 21 0 241 232 18 0 chr5 16977105 16977161 -186108371 - L2 LINE L2 -1 3312 3256 717 279 135 22 chr5 16977184 16977630 -186107902 - L2 LINE L2 -219 3094 2590 1937 112 22 0 chr5 16977638 16977905 -186107627 + AluSx SINE Alu 22 294 -18 3247 153 44 10 chr5 16977907 16978526 -186107006 + LTR9B LTR ERV1 5 644 0 185 325 26 34 chr5 16978534 16978651 -186106881 - L2 LINE L2 -749 2565 2450 372 208 0 0 chr5 16978672 16978744 -186106788 - MLT1D LTR MaLR -433 72 1 1241 285 148 4 chr5 16978759 16979271 -186106261 - L2 LINE L2 -881 2433 1848 1436 244 99 38 chr5 16979277 16979851 -186105681 + MLT1E2 LTR MaLR 13 621 -5 327 284 341 21 chr5 16979854 16980273 -186105259 - L2 LINE L2 -1457 1857 1305 2095 122 6 13 chr5 16980307 16980618 -186104914 - AluY SINE Alu -2 309 1 452 194 0 0 chr5 16980635 16980738 -186104794 - L1MA7 LINE L1 -2 6289 6187 315 301 30 38 chr5 16980816 16980865 -186104667 - MIR3 SINE MIR -9 199 151 3234 108 16 85 chr5 16980865 16981428 -186104104 + MER1A DNA MER1_type 4 527 0 315 301 30 38 chr5 16981428 16981511 -186104021 - MIR3 SINE MIR -57 151 68 2120 113 0 0 chr5 16984712 16985134 -186100398 + AluSq SINE Alu 1 422 0 535 196 0 10 chr5 16985290 16985392 -186100140 + MER69A DNA AcHobo 4 104 -73 412 334 88 34 chr5 16985694 16986047 -186099485 + L2 LINE L2 2475 2846 -468 577 180 16 8 chr5 16986048 16986170 -186099362 + MLT1C LTR MaLR 1 123 -344 368 80 293 13 chr5 16986169 16986244 -186099288 + MLT1C LTR MaLR 372 467 0 * 250 322 53 13 chr5 16986297 16986449 -186099083 + L2 LINE L2 2921 3078 -194 252 315 0 0 chr5 16986764 16986818 -186098714 + L2 LINE L2 3202 3255 -17 28 0 0 0 chr5 16988370 16988398 -186097134 + AT_rich Low_complexity Low_complexity 1 28 0 1951 149 0 38 chr5 16988437 16988753 -186096779 - AluSx SINE Alu -8 304 1 1355 99 25 0 chr5 16988759 16988960 -186096572 - L1PA15 LINE L1 -16 6149 5944 1992 140 16 13 chr5 16990057 16990365 -186095167 + AluSx SINE Alu 1 309 -3 180 97 0 0 chr5 16990383 16990414 -186095118 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3075 123 25 82 chr5 16990975 16991534 -186093998 - MER1A DNA MER1_type 0 527 1 454 32 63 0 chr5 16991673 16991736 -186093796 - L1PA4 LINE L1 -2 6153 6087 21 57 0 0 chr5 16993814 16993849 -186091683 + AT_rich Low_complexity Low_complexity 1 35 0 1953 154 3 7 chr5 16993926 16994224 -186091308 - AluJb SINE Alu -15 297 1 24545 103 26 67 chr5 16994395 16994778 -186090754 + L1PA7 LINE L1 8 405 -6056 2372 89 3 0 chr5 16994778 16995081 -186090451 - AluSp SINE Alu -9 304 1 24545 103 26 67 chr5 16995081 16997819 -186087713 + L1PA7 LINE L1 405 2851 -3610 2831 0 0 0 chr5 16997819 16998122 -186087410 - AluYa5 SINE Alu -8 303 1 24545 103 26 67 chr5 16998122 17000616 -186084916 + L1PA7 LINE L1 2851 5446 -1015 4454 67 3 0 chr5 17000616 17001193 -186084339 + L1PA7 LINE L1 5887 6469 0 273 250 74 48 chr5 17002809 17002958 -186082574 + MLT1J LTR MaLR 1 126 -320 701 235 24 24 chr5 17002986 17003156 -186082376 - MER5B DNA MER1_type -7 171 2 503 303 15 20 chr5 17003213 17003408 -186082124 + MLT1J LTR MaLR 315 508 -3 401 252 41 32 chr5 17003583 17003706 -186081826 + L2 LINE L2 3186 3309 -4 2186 110 13 0 chr5 17004291 17004590 -186080942 + AluSx SINE Alu 4 306 -6 29 28 0 0 chr5 17005455 17005491 -186080041 + AT_rich Low_complexity Low_complexity 1 36 0 590 301 167 53 chr5 17005776 17006586 -186078946 + L2 LINE L2 2072 2973 -341 2158 98 49 0 chr5 17007620 17007906 -186077626 - AluSc SINE Alu -9 300 1 344 311 34 0 chr5 17009550 17009669 -186075863 + L2 LINE L2 3149 3271 -1 2114 113 26 47 chr5 17009825 17010205 -186075327 + THE1C LTR MaLR 2 373 -2 233 271 29 0 chr5 17010779 17010849 -186074683 + MIR SINE MIR 117 188 -74 238 258 108 42 chr5 17012250 17012417 -186073115 + L1ME4a LINE L1 5944 6121 0 216 0 0 0 chr5 17012419 17012443 -186073089 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 249 255 255 0 chr5 17012717 17012815 -186072717 + MIR SINE MIR 82 204 -58 614 245 137 8 chr5 17012817 17013183 -186072349 + LTR16A1 LTR ERVL 8 442 -15 254 282 119 66 chr5 17014596 17014915 -186070617 - LTR33 LTR ERVL -183 338 3 368 323 55 30 chr5 17014921 17015156 -186070376 - L1M4 LINE L1 -1535 4611 4371 917 210 10 68 chr5 17015463 17015748 -186069784 + L1PB4 LINE L1 5903 6296 -2 201 208 21 0 chr5 17015943 17015991 -186069541 + (TTA)n Simple_repeat Simple_repeat 1 49 0 215 79 26 0 chr5 17016255 17016293 -186069239 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 814 174 0 0 chr5 17016293 17016414 -186069118 - FLAM_C SINE Alu -22 121 1 1750 199 3 0 chr5 17017138 17017430 -186068102 - AluSx SINE Alu -19 293 1 2271 103 10 0 chr5 17017799 17018100 -186067432 + AluSq SINE Alu 1 304 -9 2068 251 30 48 chr5 17019509 17020345 -186065187 + L1M3de LINE L1 938 1867 -5619 6732 234 15 14 chr5 17020359 17021907 -186063625 + L1M3de LINE L1 1199 2535 -4951 534 165 11 0 chr5 17021907 17021998 -186063534 - Tigger5 DNA MER2_type 0 2323 2232 286 240 0 27 chr5 17022047 17022122 -186063410 - Tigger5 DNA MER2_type 0 2323 2251 286 175 0 35 chr5 17022089 17022146 -186063386 - Tigger5 DNA MER2_type -2268 55 1 6117 222 52 31 chr5 17022146 17025159 -186060373 + L1M3de LINE L1 2259 5293 -2272 188 109 0 109 chr5 17025794 17025840 -186059692 + L2 LINE L2 3273 3313 0 25 0 0 0 chr5 17026558 17026583 -186058949 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 17026938 17026962 -186058570 + AT_rich Low_complexity Low_complexity 1 24 0 418 212 53 44 chr5 17027017 17027130 -186058402 + MIR SINE MIR 90 203 -59 2030 116 7 13 chr5 17027168 17027471 -186058061 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 17027475 17027500 -186058032 + AT_rich Low_complexity Low_complexity 1 25 0 195 129 0 0 chr5 17027520 17027551 -186057981 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 104 0 0 chr5 17027879 17027927 -186057605 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 542 259 157 5 chr5 17029398 17029583 -186055949 + MIR SINE MIR 50 262 0 364 330 146 40 chr5 17030082 17030891 -186054641 + L2 LINE L2 748 1642 -1672 435 283 101 25 chr5 17030943 17031141 -186054391 + L2 LINE L2 2916 3128 -185 660 296 45 42 chr5 17031309 17031711 -186053821 + L1ME4a LINE L1 5530 5932 -189 24 67 0 0 chr5 17031774 17031819 -186053713 + AT_rich Low_complexity Low_complexity 1 45 0 1681 206 138 16 chr5 17032040 17032541 -186052991 + MER68 LTR ERV1 1 562 0 2139 111 3 3 chr5 17032738 17033035 -186052497 + AluSx SINE Alu 1 297 -15 693 167 65 14 chr5 17034888 17035026 -186050506 + MLT1D LTR MaLR 1 145 -360 233 306 62 42 chr5 17035288 17035432 -186050100 - L3b LINE CR1 -133 1450 1304 255 229 0 0 chr5 17036100 17036161 -186049371 + L1MA7 LINE L1 6197 6257 -34 24 67 0 0 chr5 17036206 17036251 -186049281 + AT_rich Low_complexity Low_complexity 1 45 0 364 252 37 0 chr5 17036660 17036767 -186048765 - MER103 DNA DNA -45 121 11 2689 3 0 3 chr5 17037597 17037891 -186047641 + AluYa5 SINE Alu 1 293 -18 1628 265 122 53 chr5 17038254 17039301 -186046231 + L2 LINE L2 2183 3305 -8 368 155 70 120 chr5 17039615 17039757 -186045775 - MER103 DNA DNA -12 154 20 238 347 57 32 chr5 17040017 17040141 -186045391 - MIR3 SINE MIR -67 141 15 1458 301 44 9 chr5 17040397 17040856 -186044676 + MLT1H1 LTR MaLR 26 500 -55 474 303 55 55 chr5 17041120 17041358 -186044174 + MIR SINE MIR 3 240 -22 1404 293 54 71 chr5 17041400 17041534 -186043998 + L2 LINE L2 1894 2029 -1285 2289 107 7 0 chr5 17041534 17041844 -186043688 - AluSx SINE Alu 0 312 1 1404 293 54 71 chr5 17041844 17042748 -186042784 + L2 LINE L2 2029 2914 -400 27 87 0 0 chr5 17044224 17044293 -186041239 + AT_rich Low_complexity Low_complexity 1 69 0 446 326 160 39 chr5 17044809 17045196 -186040336 + L1MEd LINE L1 29 462 -5657 348 250 12 0 chr5 17045209 17045293 -186040239 - MER58 DNA MER1_type -60 281 197 501 309 77 50 chr5 17045359 17046103 -186039429 + L1MEd LINE L1 489 1252 -4867 25 51 0 0 chr5 17046166 17046205 -186039327 + AT_rich Low_complexity Low_complexity 1 39 0 464 344 41 36 chr5 17046212 17046575 -186038957 + L1MEd LINE L1 1321 1685 -4444 340 281 154 19 chr5 17046661 17046921 -186038611 + L1MEd LINE L1 1877 2171 -3958 197 199 60 0 chr5 17046935 17047101 -186038431 + (TA)n Simple_repeat Simple_repeat 1 176 0 288 246 20 91 chr5 17047184 17047242 -186038290 + L1MEd LINE L1 2196 2257 -3872 1961 167 0 0 chr5 17047242 17047553 -186037979 + AluJb SINE Alu 1 311 -1 288 246 20 91 chr5 17047553 17047693 -186037839 + L1MEd LINE L1 2257 2380 -3749 1596 196 125 3 chr5 17047806 17048159 -186037373 + MSTD LTR MaLR 1 396 0 4866 143 37 18 chr5 17048165 17049057 -186036475 + L1MC1 LINE L1 5425 6333 0 593 301 54 24 chr5 17049124 17049699 -186035833 + L1MEd LINE L1 2647 3238 -2891 2239 82 7 0 chr5 17049762 17050042 -186035490 + AluSx SINE Alu 1 282 -30 1734 136 55 16 chr5 17051768 17052076 -186033456 - MER44D DNA MER2_type 0 609 20 277 351 97 9 chr5 17052390 17052504 -186033028 + L2 LINE L2 3137 3260 -12 956 259 8 29 chr5 17052786 17053029 -186032503 + MIR SINE MIR 4 241 -21 239 270 40 10 chr5 17055019 17055119 -186030413 + (TA)n Simple_repeat Simple_repeat 1 103 0 239 257 28 37 chr5 17055181 17055290 -186030242 + (TA)n Simple_repeat Simple_repeat 1 108 0 212 250 0 0 chr5 17055481 17055525 -186030007 - L2 LINE L2 -2 3311 3268 180 200 40 20 chr5 17056005 17056055 -186029477 + L2 LINE L2 3263 3313 0 388 230 20 0 chr5 17057860 17057960 -186027572 + L1MC5 LINE L1 7797 7898 -63 37 0 0 0 chr5 17058722 17058759 -186026773 + AT_rich Low_complexity Low_complexity 1 37 0 30 0 0 0 chr5 17059209 17059239 -186026293 + AT_rich Low_complexity Low_complexity 1 30 0 237 197 33 0 chr5 17059560 17059621 -186025911 + L1MC4 LINE L1 6641 6703 -1339 233 342 13 0 chr5 17060254 17060333 -186025199 - L2 LINE L2 0 3313 3234 1536 201 102 56 chr5 17060595 17061079 -186024453 + MLT1F1 LTR MaLR 7 513 -54 2190 99 13 7 chr5 17061079 17061381 -186024151 - AluSg SINE Alu -6 304 1 1536 201 102 56 chr5 17061381 17061439 -186024093 + MLT1F1 LTR MaLR 513 567 0 1181 125 31 18 chr5 17062247 17062413 -186023119 - L1MA4A LINE L1 0 6303 6132 522 42 111 0 chr5 17062413 17062485 -186023047 - MADE1 DNA Mariner 0 80 1 1181 125 31 18 chr5 17062485 17062542 -186022990 - L1MA4A LINE L1 -171 6132 6077 572 27 0 0 chr5 17063629 17063702 -186021830 + L1PA4 LINE L1 6080 6152 -3 426 79 0 0 chr5 17064026 17064089 -186021443 + (TC)n Simple_repeat Simple_repeat 2 64 0 396 0 0 0 chr5 17064089 17064133 -186021399 + (CA)n Simple_repeat Simple_repeat 1 44 0 2294 99 0 3 chr5 17065059 17065362 -186020170 + AluSx SINE Alu 2 303 -9 2263 85 3 7 chr5 17066375 17066670 -186018862 + AluSq SINE Alu 1 294 -19 238 273 0 136 chr5 17066686 17066796 -186018736 - MIR SINE MIR -104 104 10 564 275 60 64 chr5 17066862 17067007 -186018525 + MIR SINE MIR 12 157 -105 2400 90 3 0 chr5 17067007 17067308 -186018224 + AluSp SINE Alu 1 302 -11 564 275 60 64 chr5 17067308 17067413 -186018119 + MIR SINE MIR 157 261 -1 2188 127 5 42 chr5 17068028 17068405 -186017127 - THE1B LTR MaLR -1 363 1 381 203 0 0 chr5 17068468 17068542 -186016990 + MER81 DNA DNA 10 83 -31 30 27 0 0 chr5 17069684 17069721 -186015811 + AT_rich Low_complexity Low_complexity 1 37 0 2130 90 3 72 chr5 17069826 17070158 -186015374 + AluSc SINE Alu 1 309 0 3923 135 33 19 chr5 17071422 17072124 -186013408 + L1MB2 LINE L1 5457 6168 -3 378 266 53 9 chr5 17072556 17072669 -186012863 + MIR SINE MIR 141 258 -4 578 267 9 59 chr5 17072815 17073036 -186012496 - MER63A DNA MER1_type 0 210 1 292 269 145 0 chr5 17074022 17074167 -186011365 - L1ME4a LINE L1 -1 6120 5955 262 269 76 19 chr5 17074461 17074632 -186010900 - L1ME4a LINE L1 -206 5915 5728 231 200 20 0 chr5 17074712 17074762 -186010770 - L2 LINE L2 -1 3312 3262 192 390 88 48 chr5 17075062 17075357 -186010175 - L2 LINE L2 -367 2947 2641 232 321 124 22 chr5 17075400 17075537 -186009995 - L2 LINE L2 -926 2388 2238 804 221 38 9 chr5 17075543 17075756 -186009776 - MER20 DNA MER1_type 0 219 1 277 256 64 13 chr5 17075843 17075921 -186009611 - MER91B DNA MER1_type -107 83 2 225 188 0 42 chr5 17075926 17075974 -186009558 + L2 LINE L2 3268 3313 0 2269 113 7 0 chr5 17076123 17076423 -186009109 + AluSx SINE Alu 1 302 -10 766 292 144 14 chr5 17076548 17077061 -186008471 + MLT1G1 LTR MaLR 8 587 -8 275 331 47 24 chr5 17077121 17077248 -186008284 - L2 LINE L2 -1480 1834 1705 560 298 36 6 chr5 17078730 17078898 -186006634 + MIR3 SINE MIR 18 190 -18 355 270 88 15 chr5 17079628 17079765 -186005767 - MIR SINE MIR -74 188 42 3349 167 12 78 chr5 17080559 17081303 -186004229 + MER44D DNA MER2_type 10 704 -1 258 348 25 8 chr5 17081711 17081829 -186003703 + L2 LINE L2 3188 3307 -6 22 0 0 0 chr5 17083019 17083041 -186002491 + AT_rich Low_complexity Low_complexity 1 22 0 748 191 23 23 chr5 17083112 17083285 -186002247 - MER5B DNA MER1_type -5 173 1 261 286 78 0 chr5 17083494 17083571 -186001961 + L2 LINE L2 3231 3313 0 1809 158 7 17 chr5 17083689 17083986 -186001546 + AluJo SINE Alu 6 299 -13 2622 117 33 35 chr5 17085062 17085548 -185999984 + MER31A LTR ERV1 1 485 0 243 305 84 130 chr5 17085820 17086128 -185999404 - L2 LINE L2 0 3272 2979 23 0 0 0 chr5 17086808 17086831 -185998701 + AT_rich Low_complexity Low_complexity 1 23 0 1811 160 7 10 chr5 17088217 17088517 -185997015 - AluJb SINE Alu -13 299 1 285 281 11 22 chr5 17089438 17089527 -185996005 - L2 LINE L2 -1 3312 3225 499 204 68 20 chr5 17089550 17089697 -185995835 - MER104 DNA Tc2 -26 154 1 213 313 45 15 chr5 17089946 17090013 -185995519 + MIR SINE MIR 5 73 -189 854 291 10 14 chr5 17090552 17090841 -185994691 + HsTC2b DNA Tc2 64 351 -564 529 218 218 5 chr5 17090837 17091039 -185994493 + HsTC2b DNA Tc2 640 884 -34 * 2200 88 32 3 chr5 17092904 17093189 -185992343 - AluSp SINE Alu -20 293 1 2076 148 0 10 chr5 17093822 17094133 -185991399 - AluJo SINE Alu -4 308 1 941 114 0 23 chr5 17095405 17095536 -185989996 - FRAM SINE Alu -24 152 25 21 0 0 0 chr5 17095663 17095684 -185989848 + AT_rich Low_complexity Low_complexity 1 21 0 2285 115 0 6 chr5 17096307 17096621 -185988911 - AluSx SINE Alu 0 312 1 2254 131 91 10 chr5 17097627 17098023 -185987509 + MSTA LTR MaLR 1 428 0 311 218 0 0 chr5 17098918 17098973 -185986559 + L2 LINE L2 3211 3265 -7 36 0 0 0 chr5 17100173 17100209 -185985323 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 17100422 17100464 -185985068 + AT_rich Low_complexity Low_complexity 1 42 0 201 182 0 0 chr5 17100567 17100600 -185984932 + (TA)n Simple_repeat Simple_repeat 1 33 0 454 287 56 9 chr5 17100606 17100822 -185984710 - L1ME4a LINE L1 -238 5883 5658 249 229 29 131 chr5 17100904 17101079 -185984453 - L1ME4a LINE L1 -2337 5471 5315 1917 120 45 0 chr5 17101570 17101858 -185983674 - AluSx SINE Alu 0 302 3 2282 89 3 3 chr5 17102299 17102591 -185982941 + AluSq SINE Alu 1 292 -21 952 239 42 5 chr5 17103026 17103239 -185982293 + MER58A DNA MER1_type 4 224 0 27 49 0 0 chr5 17103786 17103827 -185981705 + AT_rich Low_complexity Low_complexity 1 41 0 256 185 0 0 chr5 17103832 17103886 -185981646 - MIR SINE MIR -108 154 101 220 217 0 0 chr5 17103927 17103973 -185981559 - MIR SINE MIR -114 148 103 2365 112 0 0 chr5 17103975 17104287 -185981245 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 17104514 17104543 -185980989 + AT_rich Low_complexity Low_complexity 1 29 0 1026 126 11 33 chr5 17104608 17104791 -185980741 - L1MA10 LINE L1 0 6334 6156 21 0 0 0 chr5 17104880 17104901 -185980631 + AT_rich Low_complexity Low_complexity 1 21 0 834 183 102 42 chr5 17105101 17105470 -185980062 - MER31B LTR ERV1 0 466 1 1690 156 30 13 chr5 17105722 17105909 -185979623 + LTR64 LTR ERVK 1 197 -361 2269 85 3 3 chr5 17105909 17106222 -185979310 + AluSx SINE Alu 1 313 0 1690 156 30 13 chr5 17106222 17106335 -185979197 + LTR64 LTR ERVK 197 307 -251 1199 142 118 5 chr5 17106356 17106568 -185978964 - AluJo SINE Alu -66 246 11 860 211 211 0 chr5 17106582 17106809 -185978723 + LTR64 LTR ERVK 284 558 0 259 56 0 0 chr5 17108421 17108457 -185977075 - L1PB1 LINE L1 -1 6866 6831 18121 134 59 24 chr5 17108519 17108814 -185976718 - L1PB1 LINE L1 -40 6827 6544 210 71 0 0 chr5 17108814 17108842 -185976690 + (TG)n Simple_repeat Simple_repeat 2 29 0 18121 134 59 24 chr5 17108842 17109461 -185976071 - L1PB1 LINE L1 -323 6544 5948 2087 134 6 13 chr5 17109461 17109775 -185975757 - AluSx SINE Alu 0 312 1 18121 134 59 24 chr5 17109775 17110235 -185975297 - L1PB1 LINE L1 -919 5948 5505 210 37 0 0 chr5 17110235 17110262 -185975270 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 18121 134 59 24 chr5 17110262 17115479 -185970053 - L1PB1 LINE L1 -1362 5505 4 282 95 0 0 chr5 17115528 17115570 -185969962 + AluJo SINE Alu 89 130 -172 1879 225 83 7 chr5 17115578 17116022 -185969510 + MLT1D LTR MaLR 28 505 0 272 93 167 0 chr5 17116133 17116187 -185969345 + MIR SINE MIR 84 146 -116 2228 159 21 45 chr5 17116296 17116718 -185968814 + MER65A LTR ERV1 1 412 -33 1845 148 40 3 chr5 17116740 17117037 -185968495 - AluJb SINE Alu -3 309 2 254 204 0 0 chr5 17117037 17117086 -185968446 + MER65A LTR ERV1 397 445 0 1814 142 78 26 chr5 17117684 17118029 -185967503 - THE1B LTR MaLR 0 364 2 240 264 27 109 chr5 17118384 17118494 -185967038 + LTR67 LTR ERVL 100 200 -357 731 224 48 0 chr5 17118503 17118650 -185966882 + AluJo SINE Alu 137 290 -22 2124 206 60 37 chr5 17118845 17119303 -185966229 + MER44D DNA MER2_type 1 447 -2040 198 0 0 0 chr5 17119303 17119325 -185966207 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 294 29 0 0 chr5 17119324 17119359 -185966173 + (CA)n Simple_repeat Simple_repeat 2 36 0 2124 206 60 37 chr5 17119325 17119438 -185966094 + MER44D DNA MER2_type 447 605 0 21 36 0 0 chr5 17119571 17119599 -185965933 + AT_rich Low_complexity Low_complexity 1 28 0 598 185 35 17 chr5 17119990 17120126 -185965406 - MLT1A1 LTR MaLR -2 570 260 1669 190 78 13 chr5 17120820 17121134 -185964398 + MLT2D LTR ERVL 6 351 -63 2023 159 45 0 chr5 17121134 17121467 -185964065 + MER7A DNA MER2_type 1 346 0 1669 190 78 13 chr5 17121467 17121536 -185963996 + MLT2D LTR ERVL 351 414 0 644 305 35 39 chr5 17121580 17122134 -185963398 + L2 LINE L2 2725 3312 -1 * 1081 250 167 56 chr5 17122123 17122446 -185963086 + L2 LINE L2 1700 1986 -1327 2186 108 3 16 chr5 17122446 17122751 -185962781 - AluSc SINE Alu -8 301 1 1081 250 167 56 chr5 17122751 17123857 -185961675 + L2 LINE L2 1986 3308 -5 262 260 78 0 chr5 17123912 17123989 -185961543 + L2 LINE L2 3149 3231 -41 2377 141 16 33 chr5 17124416 17124843 -185960689 + MER95 LTR ERV 7 426 -5 202 401 0 0 chr5 17125082 17125259 -185960273 + (TGAA)n Simple_repeat Simple_repeat 1 177 0 262 360 27 0 chr5 17125599 17125749 -185959783 + MER5B DNA MER1_type 1 154 -24 774 184 7 0 chr5 17125954 17126095 -185959437 - Charlie1 DNA MER1_type 0 2761 2620 435 223 291 0 chr5 17126089 17126264 -185959268 - Charlie1 DNA MER1_type -2534 227 2 * 763 211 94 55 chr5 17126519 17126827 -185958705 + MLT1D LTR MaLR 9 328 -177 5049 41 0 2 chr5 17126827 17127437 -185958095 - L1P LINE L1 -1679 4467 3859 5319 36 0 0 chr5 17127437 17128043 -185957489 + L1PA5 LINE L1 5528 6143 -11 333 0 0 0 chr5 17128044 17128081 -185957451 + (TA)n Simple_repeat Simple_repeat 1 37 0 754 164 26 77 chr5 17128081 17128276 -185957256 + MLT1D LTR MaLR 320 504 -1 362 255 50 56 chr5 17129731 17129892 -185955640 + LTR16C LTR ERVL 332 491 0 2124 92 50 3 chr5 17130185 17130467 -185955065 + AluSx SINE Alu 2 296 -16 2297 108 0 13 chr5 17131030 17131335 -185954197 - AluSx SINE Alu -11 301 1 2234 97 0 23 chr5 17131341 17131640 -185953892 - AluSg SINE Alu -18 292 1 324 219 91 91 chr5 17131909 17132096 -185953436 + L1ME4a LINE L1 5787 5976 -145 2561 63 0 0 chr5 17132096 17132396 -185953136 - AluY SINE Alu -11 300 1 324 219 91 91 chr5 17132396 17132495 -185953037 + L1ME4a LINE L1 5975 6073 -48 1086 211 9 5 chr5 17132506 17132724 -185952808 - MIR SINE MIR -26 236 18 195 139 0 0 chr5 17132766 17132802 -185952730 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 2398 87 0 3 chr5 17132884 17133195 -185952337 + AluY SINE Alu 1 310 -1 2220 122 3 0 chr5 17133199 17133503 -185952029 + AluSq SINE Alu 1 305 -8 738 119 22 0 chr5 17134099 17134233 -185951299 + GA-rich Low_complexity Low_complexity 3 139 0 1887 223 57 94 chr5 17138070 17138811 -185946721 - MER69B DNA AcHobo -9 1217 505 392 145 36 36 chr5 17138830 17138913 -185946619 - MLT1A1 LTR MaLR -282 83 1 4045 196 63 20 chr5 17138921 17139733 -185945799 - MLT1A1-int LTR MaLR -2 1733 887 3382 118 58 74 chr5 17139737 17140099 -185945433 - MLT1A1-int LTR MaLR -1107 628 243 280 0 28 0 chr5 17140099 17140135 -185945397 - tRNA-Cys-TGC tRNA tRNA -38 37 1 3382 118 58 74 chr5 17140135 17140375 -185945157 - MLT1A1-int LTR MaLR -1492 243 1 1635 206 13 68 chr5 17140375 17140460 -185945072 - MLT1A1 LTR MaLR 0 365 277 2380 101 0 0 chr5 17140460 17140756 -185944776 - AluSx SINE Alu -16 296 1 1635 206 13 68 chr5 17140756 17141054 -185944478 - MLT1A1 LTR MaLR -88 277 3 518 162 179 0 chr5 17141058 17141175 -185944357 - MER69B DNA AcHobo -1087 139 2 2209 119 0 0 chr5 17141490 17141784 -185943748 - AluSx SINE Alu -18 294 1 3841 169 34 18 chr5 17141811 17142549 -185942983 - L1MB1 LINE L1 -1 6167 5418 1513 201 87 47 chr5 17142636 17143083 -185942449 + MLT1C LTR MaLR 1 465 -2 703 102 17 17 chr5 17143085 17143203 -185942329 - L1P LINE L1 -747 5419 5302 4585 129 17 8 chr5 17143203 17143925 -185941607 + L1PA16 LINE L1 5438 6166 0 2339 96 3 19 chr5 17143961 17144274 -185941258 - AluY SINE Alu -3 308 1 192 77 0 0 chr5 17144277 17144303 -185941229 + (T)n Simple_repeat Simple_repeat 1 26 0 2209 116 0 0 chr5 17144516 17144808 -185940724 - AluSc SINE Alu -17 292 1 27 0 0 0 chr5 17145435 17145462 -185940070 + AT_rich Low_complexity Low_complexity 1 27 0 883 211 161 70 chr5 17146153 17146698 -185938834 + MLT1G1 LTR MaLR 1 595 0 328 254 91 0 chr5 17147150 17147260 -185938272 + MIR SINE MIR 25 144 -64 374 300 33 0 chr5 17147365 17147485 -185938047 + MIR3 SINE MIR 54 177 -31 323 308 8 38 chr5 17148737 17148870 -185936662 + MIR SINE MIR 13 141 -121 1882 179 54 14 chr5 17148947 17149316 -185936216 - MLT1B LTR MaLR -6 384 1 271 244 24 12 chr5 17149674 17149756 -185935776 + L2 LINE L2 3197 3279 -34 2282 119 3 0 chr5 17150502 17150813 -185934719 + AluSx SINE Alu 1 312 0 225 239 25 25 chr5 17150850 17150951 -185934581 + GA-rich Low_complexity Low_complexity 2 105 -55 1874 115 28 65 chr5 17150951 17151272 -185934260 + AluSx SINE Alu 1 309 -3 225 239 25 25 chr5 17151272 17151329 -185934203 + GA-rich Low_complexity Low_complexity 104 160 0 229 229 0 43 chr5 17151338 17151408 -185934124 + L2 LINE L2 3246 3312 -1 524 245 123 19 chr5 17152524 17152785 -185932747 - L1ME4a LINE L1 -2 6119 5832 195 69 0 0 chr5 17154465 17154494 -185931038 + (CGCGG)n Simple_repeat Simple_repeat 3 31 0 1593 115 24 77 chr5 17155017 17155355 -185930177 - MER33 DNA MER1_type 0 324 5 3342 131 10 4 chr5 17155368 17155858 -185929674 - MER1A DNA MER1_type 0 529 37 2245 94 3 7 chr5 17155969 17156266 -185929266 - AluSq SINE Alu -17 296 1 2045 118 20 10 chr5 17156266 17156563 -185928969 - AluSx SINE Alu -12 300 1 302 264 65 52 chr5 17157022 17157177 -185928355 - MIR SINE MIR -47 215 59 2204 125 0 0 chr5 17157920 17158209 -185927323 - AluSx SINE Alu -23 289 1 209 241 69 0 chr5 17158277 17158335 -185927197 + L2 LINE L2 3244 3305 -8 2368 108 10 0 chr5 17158488 17158795 -185926737 + AluSg SINE Alu 1 310 0 244 306 0 0 chr5 17158836 17158898 -185926634 - MIR SINE MIR -105 103 42 826 292 58 65 chr5 17160451 17161003 -185924529 + LTR67 LTR ERVL 2 549 -8 5603 125 2 6 chr5 17161008 17161872 -185923660 - L1P LINE L1 -1033 5113 4253 2195 108 35 20 chr5 17161872 17162201 -185923331 + L1PA10 LINE L1 5817 6164 -4 237 214 0 18 chr5 17162491 17162547 -185922985 - MLT2C1 LTR ERVL -2 518 464 420 20 0 0 chr5 17162563 17162612 -185922920 + (CA)n Simple_repeat Simple_repeat 1 49 0 739 229 78 0 chr5 17162638 17162804 -185922728 - MLT2C1 LTR ERVL -40 357 179 778 163 23 8 chr5 17163292 17163421 -185922111 + AluJ SINE Alu 5 135 -177 7143 23 0 1 chr5 17163421 17164236 -185921296 - L1PA4 LINE L1 -4 6151 5338 914 216 0 0 chr5 17164237 17164404 -185921128 + AluJ SINE Alu 134 300 -12 693 248 40 0 chr5 17164737 17164939 -185920593 + LTR37B LTR ERV1 4 213 -255 438 204 0 45 chr5 17165003 17165091 -185920441 + FLAM_A SINE Alu 36 119 -23 186 133 0 0 chr5 17165104 17165134 -185920398 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 239 22 43 chr5 17165135 17165227 -185920305 + L1MC4 LINE L1 6614 6703 -1339 253 278 0 0 chr5 17165227 17165299 -185920233 + LTR37B LTR ERV1 217 288 -180 329 204 54 0 chr5 17165345 17165438 -185920094 + LTR37B LTR ERV1 368 465 -3 1319 218 35 58 chr5 17166392 17166791 -185918741 - MLT1B LTR MaLR 0 390 1 198 316 231 0 chr5 17166893 17167010 -185918522 - L2 LINE L2 0 3272 3129 2153 122 3 7 chr5 17167530 17167825 -185917707 - AluSx SINE Alu -18 294 1 32 43 0 0 chr5 17167886 17167932 -185917600 + AT_rich Low_complexity Low_complexity 1 46 0 208 158 0 26 chr5 17168533 17168571 -185916961 + (TG)n Simple_repeat Simple_repeat 2 38 0 2307 116 0 0 chr5 17169320 17169621 -185915911 - AluSx SINE Alu -11 301 1 3759 164 13 80 chr5 17170512 17171230 -185914302 + L1MB8 LINE L1 5382 6036 -142 1874 148 32 3 chr5 17171230 17171514 -185914018 + AluJb SINE Alu 1 292 -20 3759 164 13 80 chr5 17171514 17171648 -185913884 + L1MB8 LINE L1 6036 6177 -1 208 327 69 40 chr5 17172927 17173129 -185912403 + L2 LINE L2 1168 1375 -1939 598 256 63 5 chr5 17173335 17173526 -185912006 + MIR SINE MIR 51 252 -10 200 203 62 16 chr5 17173543 17173607 -185911925 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1420 120 0 0 chr5 17173641 17173825 -185911707 - AluSg SINE Alu -126 184 1 269 290 206 0 chr5 17174413 17174520 -185911012 - MER94 DNA DNA -4 130 2 243 319 33 44 chr5 17174755 17174937 -185910595 + L2 LINE L2 2221 2400 -914 228 320 70 33 chr5 17175185 17175429 -185910103 + L2 LINE L2 1789 2041 -1273 218 277 89 0 chr5 17175429 17175541 -185909991 - L2 LINE L2 -917 2397 2276 528 156 11 0 chr5 17175546 17175636 -185909896 - MER3 DNA MER1_type 0 209 119 387 206 0 0 chr5 17176079 17176152 -185909380 + L2 LINE L2 3240 3312 -1 257 109 22 0 chr5 17176153 17176199 -185909333 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 291 280 127 38 chr5 17176934 17176993 -185908539 - MIR SINE MIR -67 195 143 2247 108 76 15 chr5 17176993 17177336 -185908196 - THE1B LTR MaLR 0 364 1 291 280 127 38 chr5 17177336 17177433 -185908099 - MIR SINE MIR -119 143 25 1399 228 13 0 chr5 17177699 17177997 -185907535 + MLT1H1 LTR MaLR 254 555 0 249 338 45 15 chr5 17178942 17179075 -185906457 - L3b LINE CR1 -8 1575 1439 227 167 48 0 chr5 17179199 17179241 -185906291 - MER91 DNA MER1_type -11 185 142 1183 183 19 60 chr5 17180299 17180527 -185905005 + L1MB5 LINE L1 5912 6129 -45 2281 99 3 0 chr5 17180527 17180821 -185904711 + AluSx SINE Alu 1 295 -17 1183 183 19 60 chr5 17180821 17180860 -185904672 + L1MB5 LINE L1 6129 6168 -6 293 103 0 0 chr5 17180909 17180948 -185904584 + Charlie8 DNA MER1_type 123 161 -2256 1405 205 88 57 chr5 17181336 17181789 -185903743 - MLT1C LTR MaLR 0 467 1 354 233 35 0 chr5 17181830 17181916 -185903616 + L2 LINE L2 3206 3294 -19 325 274 26 26 chr5 17182324 17182437 -185903095 + MER5A DNA MER1_type 2 114 -75 749 297 40 11 chr5 17182686 17182962 -185902570 + MLT1L LTR MaLR 7 290 -325 2277 170 60 44 chr5 17183089 17183588 -185901944 - LTR53 LTR ERVL -2 517 11 262 111 0 0 chr5 17183943 17183979 -185901553 + LTR16C LTR ERVL 456 491 0 2121 121 46 35 chr5 17184907 17185278 -185900254 + THE1C LTR MaLR 1 375 0 264 206 44 15 chr5 17185560 17185628 -185899904 + MIR SINE MIR 79 148 -114 735 199 18 47 chr5 17185634 17185805 -185899727 + MER45A DNA AcHobo 6 171 -7 2104 139 0 0 chr5 17185902 17186219 -185899313 + AluJb SINE Alu 1 317 0 414 256 62 23 chr5 17186688 17186817 -185898715 + MER46C DNA MER2_type 4 137 -201 1701 186 0 4 chr5 17186890 17187170 -185898362 + AluJb SINE Alu 1 279 -33 1058 99 0 8 chr5 17187171 17187438 -185898094 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 292 213 33 0 chr5 17187438 17187499 -185898033 + MER46C DNA MER2_type 275 337 -1 2105 122 3 16 chr5 17187572 17187884 -185897648 + AluSq SINE Alu 1 308 -5 2673 144 32 18 chr5 17187890 17188389 -185897143 + L1MB3 LINE L1 5668 6173 -10 2175 114 0 10 chr5 17188389 17188695 -185896837 - AluSc SINE Alu -6 303 1 2011 195 54 40 chr5 17189114 17189612 -185895920 - MLT1D LTR MaLR 0 505 1 2358 81 14 0 chr5 17189652 17189821 -185895711 - AluY SINE Alu -11 300 124 252 0 0 0 chr5 17189821 17189849 -185895683 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2358 81 14 0 chr5 17189849 17189975 -185895557 - AluY SINE Alu -187 124 1 1257 285 101 41 chr5 17190142 17190679 -185894853 + L1ME2 LINE L1 1 569 -5550 917 216 33 29 chr5 17191449 17191722 -185893810 + L1ME2 LINE L1 4388 4661 -1468 602 174 36 151 chr5 17191731 17191821 -185893711 - LTR16B LTR ERVL 0 464 412 2266 115 0 0 chr5 17191821 17192116 -185893416 + AluSq SINE Alu 1 295 -18 602 174 36 151 chr5 17192116 17192244 -185893288 - LTR16B LTR ERVL -52 412 271 387 228 48 120 chr5 17192290 17192457 -185893075 - LTR16B LTR ERVL -307 157 3 3144 225 77 28 chr5 17192457 17192883 -185892649 + L1ME2 LINE L1 4665 5069 -1078 1690 66 5 5 chr5 17192883 17193094 -185892438 + AluY SINE Alu 92 302 -9 3144 225 77 28 chr5 17193094 17194065 -185891467 + L1ME2 LINE L1 5069 6138 -9 987 164 7 0 chr5 17194104 17194256 -185891276 + AluJb SINE Alu 137 289 -23 2310 92 16 7 chr5 17194457 17194762 -185890770 - AluSq SINE Alu -5 308 1 1984 255 73 43 chr5 17194875 17195658 -185889874 - L2 LINE L2 -3 3310 2473 2198 117 3 32 chr5 17195658 17195974 -185889558 + AluSx SINE Alu 6 312 0 1984 255 73 43 chr5 17195974 17196164 -185889368 - L2 LINE L2 -840 2473 2290 5001 113 54 22 chr5 17196164 17196341 -185889191 + Tigger3(Golem) DNA MER2_type 2188 2358 -670 2376 78 3 3 chr5 17196341 17196636 -185888896 + AluSq SINE Alu 1 295 -18 5001 113 54 22 chr5 17196636 17197273 -185888259 + Tigger3(Golem) DNA MER2_type 2358 3028 0 285 61 61 61 chr5 17197273 17197322 -185888210 + MLT2B1 LTR ERVL 472 520 0 300 242 161 32 chr5 17197323 17197509 -185888023 - L2 LINE L2 -2208 1106 897 1160 194 24 0 chr5 17198524 17198735 -185886797 + MER20 DNA MER1_type 2 217 -2 2081 149 28 3 chr5 17198827 17199190 -185886342 + L1PA16 LINE L1 5794 6165 -1 184 255 117 43 chr5 17199199 17199293 -185886239 - MIR SINE MIR -157 105 5 2526 49 0 0 chr5 17199320 17199608 -185885924 + AluY SINE Alu 19 306 -5 736 211 31 6 chr5 17199845 17200006 -185885526 + MIR SINE MIR 76 240 -22 2900 173 59 2 chr5 17200728 17201305 -185884227 - L1MB5 LINE L1 -13 6161 5552 376 316 153 4 chr5 17201414 17201642 -185883890 + MIR SINE MIR 1 262 0 347 253 0 0 chr5 17201892 17201987 -185883545 - L2 LINE L2 0 3313 3219 542 182 0 10 chr5 17201987 17202086 -185883446 + MER4A LTR ERV1 1 98 -566 1551 145 155 97 chr5 17202086 17202466 -185883066 + MER4A LTR ERV1 263 664 0 224 224 69 0 chr5 17202467 17202525 -185883007 - L2 LINE L2 -92 3221 3160 452 297 109 17 chr5 17202526 17202579 -185882953 - MIR SINE MIR 0 262 215 1107 237 0 18 chr5 17202579 17202807 -185882725 + MER58A DNA MER1_type 1 224 0 452 297 109 17 chr5 17202807 17202992 -185882540 - MIR SINE MIR -47 215 2 457 317 145 25 chr5 17203139 17203615 -185881917 - L2 LINE L2 -347 2967 2435 334 158 0 18 chr5 17203909 17203966 -185881566 - LTR67 LTR ERVL -388 169 114 284 125 0 94 chr5 17203925 17203989 -185881543 - MLT1J LTR MaLR -363 148 91 * 2224 92 0 10 chr5 17204056 17204350 -185881182 + AluSx SINE Alu 1 291 -21 245 327 36 0 chr5 17204441 17204551 -185880981 - L2 LINE L2 -893 2421 2308 26 64 0 0 chr5 17204757 17204804 -185880728 + AT_rich Low_complexity Low_complexity 1 47 0 2552 205 58 45 chr5 17205101 17206308 -185879224 + L1ME1 LINE L1 4603 5869 -309 413 218 0 0 chr5 17206312 17206399 -185879133 - MER119 DNA MER1_type -36 547 461 * 454 296 114 0 chr5 17206393 17206525 -185879007 - MER119 DNA MER1_type -436 147 1 641 196 120 48 chr5 17206525 17206734 -185878798 + L1ME1 LINE L1 5938 6161 -5 1510 139 4 24 chr5 17206747 17206998 -185878534 + AluJo SINE Alu 31 276 -36 2191 121 3 3 chr5 17206999 17207304 -185878228 + AluSp SINE Alu 1 305 -8 206 108 54 0 chr5 17207319 17207356 -185878176 + A-rich Low_complexity Low_complexity 2 40 0 466 272 58 5 chr5 17207868 17208059 -185877473 - MIR SINE MIR -5 257 57 463 216 32 32 chr5 17208917 17209042 -185876490 - MER94 DNA DNA -9 125 1 764 228 19 0 chr5 17209152 17209314 -185876218 + MER33 DNA MER1_type 1 165 -159 1116 136 0 0 chr5 17209314 17209468 -185876064 + AluJb SINE Alu 133 286 -26 2021 127 3 10 chr5 17209537 17209828 -185875704 - AluSx SINE Alu -19 293 5 1722 159 3 28 chr5 17209834 17210117 -185875415 - AluJo SINE Alu -21 291 16 467 180 150 0 chr5 17210186 17210286 -185875246 + MER33 DNA MER1_type 210 324 0 2311 109 0 0 chr5 17210407 17210710 -185874822 + AluSg SINE Alu 1 303 -7 301 250 25 0 chr5 17210721 17210801 -185874731 + GA-rich Low_complexity Low_complexity 2 83 0 458 232 10 10 chr5 17211966 17212065 -185873467 + MER99 DNA DNA 3 101 -727 988 195 0 0 chr5 17212072 17212236 -185873296 - AluJb SINE Alu -11 301 138 2226 114 3 0 chr5 17212320 17212617 -185872915 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 17212622 17213038 -185872494 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 17213038 17213428 -185872104 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 17213428 17213670 -185871862 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 17213833 17214095 -185871437 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 17214739 17214783 -185870749 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 17215167 17215334 -185870198 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 17215351 17215409 -185870123 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 17215409 17215707 -185869825 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 17215707 17216002 -185869530 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 17216006 17216289 -185869243 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 17216735 17216765 -185868767 + (CA)n Simple_repeat Simple_repeat 1 30 0 1521 208 0 40 chr5 17217348 17217651 -185867881 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 17217792 17217885 -185867647 - MLT1I LTR MaLR 0 409 318 1025 231 98 11 chr5 17217930 17218216 -185867316 - MLT1C LTR MaLR -141 326 16 382 274 52 7 chr5 17218243 17218378 -185867154 - MLT1J2 LTR MaLR -236 214 74 619 42 0 0 chr5 17219538 17219609 -185865923 + MER30 DNA MER1_type 12 82 -148 1859 136 7 23 chr5 17219612 17219914 -185865618 + AluSx SINE Alu 1 297 -15 968 155 19 0 chr5 17219939 17220100 -185865432 + MER30 DNA MER1_type 66 229 -1 1727 136 48 22 chr5 17220657 17220930 -185864602 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 17221090 17221384 -185864148 + AluSx SINE Alu 5 299 -13 249 146 0 42 chr5 17221436 17221484 -185864048 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 17221507 17221632 -185863900 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1131 167 51 0 chr5 17221632 17221847 -185863685 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 17221847 17222132 -185863400 - AluY SINE Alu -21 290 6 740 215 0 6 chr5 17222704 17222876 -185862656 - Charlie1 DNA MER1_type 0 2761 2591 848 141 78 0 chr5 17222884 17223026 -185862506 - AluJb SINE Alu -22 290 138 1805 141 0 59 chr5 17223048 17223354 -185862178 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 17223413 17223494 -185862038 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 1054 239 62 7 chr5 17223513 17223822 -185861710 - Charlie1 DNA MER1_type -147 2614 2289 1219 107 6 0 chr5 17223922 17224081 -185861451 - AluSx SINE Alu -148 164 5 1678 161 7 28 chr5 17224087 17224372 -185861160 - AluJo SINE Alu -21 291 13 467 180 150 0 chr5 17224420 17224520 -185861012 + Charlie5 DNA MER1_type 2471 2585 -27 2327 108 0 0 chr5 17224641 17224946 -185860586 + AluSg SINE Alu 1 305 -5 301 250 25 0 chr5 17224958 17225038 -185860494 + GA-rich Low_complexity Low_complexity 2 83 0 470 222 10 10 chr5 17226203 17226302 -185859230 + MER99 DNA DNA 3 101 -727 952 200 0 0 chr5 17226309 17226469 -185859063 - AluJb SINE Alu -15 297 138 2226 114 3 0 chr5 17226553 17226850 -185858682 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 17226855 17227271 -185858261 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 17227271 17227661 -185857871 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 17227661 17227903 -185857629 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 17228066 17228328 -185857204 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 17228972 17229016 -185856516 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 17229400 17229567 -185855965 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 17229584 17229642 -185855890 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 17229642 17229940 -185855592 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 17229940 17230235 -185855297 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 17230239 17230522 -185855010 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 17230969 17230999 -185854533 + (CA)n Simple_repeat Simple_repeat 1 30 0 1527 209 0 36 chr5 17231579 17231881 -185853651 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 17232021 17232114 -185853418 - MLT1I LTR MaLR 0 409 318 1007 234 98 11 chr5 17232159 17232445 -185853087 - MLT1C LTR MaLR -141 326 16 379 263 45 8 chr5 17232474 17232607 -185852925 - MLT1J2 LTR MaLR -239 211 74 1362 99 12 115 chr5 17233767 17233840 -185851692 + MER30 DNA MER1_type 12 91 -139 2062 146 3 0 chr5 17233840 17234149 -185851383 + AluSx SINE Alu 1 310 -2 1362 99 12 115 chr5 17234149 17234318 -185851214 + MER30 DNA MER1_type 91 229 -1 1696 139 48 22 chr5 17234875 17235148 -185850384 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 17235308 17235602 -185849930 + AluSx SINE Alu 5 299 -13 234 171 0 0 chr5 17235661 17235702 -185849830 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 17235725 17235850 -185849682 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1207 166 42 0 chr5 17235850 17236067 -185849465 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 17236067 17236352 -185849180 - AluY SINE Alu -21 290 6 750 209 0 6 chr5 17236924 17237096 -185848436 - Charlie1a DNA MER1_type 0 1455 1285 848 141 78 0 chr5 17237104 17237246 -185848286 - AluJb SINE Alu -22 290 138 1762 141 3 59 chr5 17237268 17237573 -185847959 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 17237632 17237713 -185847819 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 4897 206 64 25 chr5 17237732 17238265 -185847267 - Charlie1a DNA MER1_type -1453 1308 797 2414 66 7 3 chr5 17238265 17238566 -185846966 - AluSp SINE Alu -11 302 1 4897 206 64 25 chr5 17238566 17239289 -185846243 - Charlie1a DNA MER1_type -1964 797 3 1081 252 52 14 chr5 17239344 17239634 -185845898 - LTR16C LTR ERVL -4 487 187 429 316 47 57 chr5 17239671 17240054 -185845478 + L2 LINE L2 2935 3313 0 207 0 0 0 chr5 17240608 17240631 -185844901 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 284 14 32 chr5 17242366 17242584 -185842948 - MIR SINE MIR -22 240 27 2464 42 0 11 chr5 17242802 17243125 -185842407 + AluY SINE Alu 1 320 0 1777 158 9 29 chr5 17243470 17243786 -185841746 + AluJo SINE Alu 1 310 -2 2346 89 7 0 chr5 17244504 17244795 -185840737 + AluSq SINE Alu 1 293 -20 2593 208 66 36 chr5 17245438 17245639 -185839893 + L1MC4 LINE L1 6812 7005 -1037 2276 98 7 0 chr5 17245639 17245935 -185839597 + AluSx SINE Alu 1 298 -14 2593 208 66 36 chr5 17245935 17246427 -185839105 + L1MC4 LINE L1 7005 7526 -516 2340 82 0 14 chr5 17246527 17246821 -185838711 + AluSx SINE Alu 23 312 0 1168 224 98 90 chr5 17246821 17247330 -185838202 + L1MC4 LINE L1 7518 8030 -12 241 277 96 21 chr5 17247819 17247913 -185837619 + MLT1H LTR MaLR 432 532 -17 2211 95 0 7 chr5 17247925 17248241 -185837291 + AluSq SINE Alu 1 314 0 1992 130 3 14 chr5 17248321 17248613 -185836919 + AluJo SINE Alu 9 297 -15 2524 73 0 3 chr5 17249340 17249643 -185835889 + AluSq SINE Alu 1 302 -11 229 291 23 35 chr5 17251364 17251450 -185834082 - MIR SINE MIR -163 99 15 2265 110 10 3 chr5 17252557 17252867 -185832665 - AluSx SINE Alu 0 312 1 6200 192 49 20 chr5 17253021 17254486 -185831046 + L1MB7 LINE L1 3960 5516 -668 2360 115 0 0 chr5 17254486 17254798 -185830734 + AluSx SINE Alu 1 312 0 6200 192 49 20 chr5 17254798 17255488 -185830044 + L1MB7 LINE L1 5516 6184 0 1965 161 0 0 chr5 17255551 17255843 -185829689 - AluJb SINE Alu -20 292 1 599 273 113 30 chr5 17255871 17256102 -185829430 + MLT1L LTR MaLR 1 250 -365 692 219 65 7 chr5 17256153 17256308 -185829224 + FRAM SINE Alu 1 164 -2 1015 123 0 11 chr5 17256288 17256467 -185829065 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 2097 136 3 0 chr5 17257012 17257321 -185828211 - AluSx SINE Alu -2 310 1 2042 81 33 0 chr5 17257867 17258138 -185827394 + AluSc SINE Alu 8 287 -22 1290 177 52 30 chr5 17258155 17258426 -185827106 + AluJo SINE Alu 1 277 -35 2302 100 0 0 chr5 17258427 17258738 -185826794 - AluSx SINE Alu -1 311 1 5643 208 52 16 chr5 17258785 17260006 -185825526 + L1M4b LINE L1 90 1353 -5506 1026 225 66 68 chr5 17260029 17260510 -185825022 + LTR10B LTR ERV1 17 542 -4 862 198 5 11 chr5 17260528 17260715 -185824817 + L1M4b LINE L1 1349 1534 -5325 2237 96 0 0 chr5 17260715 17261016 -185824516 + AluY SINE Alu 1 301 -10 240 266 21 21 chr5 17261041 17261135 -185824397 + L1M4b LINE L1 2630 2723 -4415 304 255 6 89 chr5 17261152 17261309 -185824223 + L1MEc LINE L1 1762 1905 -4491 1878 147 3 0 chr5 17261400 17261692 -185823840 - AluSx SINE Alu -19 293 1 327 283 144 29 chr5 17261692 17261865 -185823667 + L1MEc LINE L1 1928 2120 -4097 2206 86 3 49 chr5 17262317 17262644 -185822888 + AluSp SINE Alu 1 312 -1 1932 141 0 26 chr5 17263468 17263780 -185821752 - AluSx SINE Alu -8 304 1 307 223 0 108 chr5 17264034 17264173 -185821359 - L1MEd LINE L1 -4865 1254 1131 1002 216 126 48 chr5 17264394 17264751 -185820781 - L1ME2 LINE L1 -16 6148 5764 231 349 167 19 chr5 17264896 17265154 -185820378 + L2 LINE L2 2954 3249 -23 377 305 0 11 chr5 17266266 17266361 -185819171 - MIR SINE MIR -66 142 49 633 269 13 118 chr5 17267679 17267984 -185817548 + MLT1J LTR MaLR 156 428 -83 218 274 0 0 chr5 17268484 17268535 -185816997 + GA-rich Low_complexity Low_complexity 4 54 0 189 0 0 0 chr5 17268546 17268567 -185816965 + (AATAG)n Simple_repeat Simple_repeat 2 22 0 2209 121 3 16 chr5 17268759 17269073 -185816459 + MER1B DNA MER1_type 30 339 0 734 224 12 47 chr5 17269073 17269243 -185816289 - MIR SINE MIR -64 198 35 479 254 25 25 chr5 17269341 17269463 -185816069 + L2 LINE L2 3191 3312 -1 282 198 136 25 chr5 17269684 17269765 -185815767 - MIR SINE MIR -50 212 123 775 250 135 56 chr5 17269987 17270513 -185815019 - MLT1G1 LTR MaLR -38 529 1 1993 116 11 0 chr5 17270964 17271296 -185814236 - AluSc SINE Alu 0 309 6 3187 153 9 22 chr5 17272126 17272663 -185812869 - LTR26B LTR ERV1 0 531 2 1879 227 74 16 chr5 17272799 17273208 -185812324 - MLT2B2 LTR ERVL -2 513 70 2479 62 0 0 chr5 17273208 17273516 -185812016 - AluY SINE Alu -3 308 1 1879 227 74 16 chr5 17273516 17273591 -185811941 - MLT2B2 LTR ERVL -445 70 1 393 318 26 0 chr5 17273652 17273803 -185811729 + MIR SINE MIR 98 252 -10 2134 105 0 0 chr5 17273834 17274141 -185811391 + AluSq SINE Alu 1 307 0 436 229 28 28 chr5 17274530 17274639 -185810893 - L2 LINE L2 -1 3312 3204 313 257 176 20 chr5 17274639 17274787 -185810745 - MARNA DNA Mariner -208 378 208 247 253 44 66 chr5 17274916 17275007 -185810525 - L1ME4a LINE L1 -73 6048 5960 423 309 16 0 chr5 17275203 17275326 -185810206 - MARNA DNA Mariner -393 193 69 1822 157 3 10 chr5 17277410 17277709 -185807823 + AluSx SINE Alu 3 299 -13 1016 194 144 19 chr5 17278200 17278355 -185807177 - AluJo SINE Alu -10 302 168 297 0 0 0 chr5 17278355 17278388 -185807144 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1016 194 144 19 chr5 17278388 17278495 -185807037 - AluJo SINE Alu -144 168 7 649 236 176 5 chr5 17278999 17279198 -185806334 - LTR16A LTR ERVL -193 257 25 1947 130 0 13 chr5 17279478 17279614 -185805918 + AluSx SINE Alu 1 137 -175 2126 112 3 0 chr5 17279614 17279910 -185805622 + AluSq SINE Alu 1 297 -16 1947 130 0 13 chr5 17279910 17280074 -185805458 + AluSx SINE Alu 137 297 -15 426 345 130 25 chr5 17280195 17280801 -185804731 - L2 LINE L2 -641 2673 2004 230 244 12 24 chr5 17281309 17281391 -185804141 - L2 LINE L2 -1442 1872 1792 2223 89 7 0 chr5 17281722 17282015 -185803517 + AluSp SINE Alu 1 295 -18 408 207 189 9 chr5 17282106 17282223 -185803309 - MLT1I LTR MaLR 0 446 277 403 194 61 31 chr5 17282318 17282416 -185803116 - MLT1J2 LTR MaLR -331 119 19 2305 89 0 6 chr5 17282621 17282935 -185802597 - AluSq SINE Alu 0 313 2 214 209 93 0 chr5 17283019 17283062 -185802470 + L2 LINE L2 3257 3303 -10 197 289 87 87 chr5 17283577 17283681 -185801851 - L2 LINE L2 -9 3304 3201 1911 106 40 0 chr5 17284113 17284416 -185801116 - AluSq SINE Alu 0 314 1 531 291 115 0 chr5 17284758 17284940 -185800592 - MIR SINE MIR -56 206 4 582 104 0 0 chr5 17285102 17285198 -185800334 + (TCCA)n Simple_repeat Simple_repeat 3 98 0 820 258 50 50 chr5 17287710 17287970 -185797562 - MIR SINE MIR 0 262 3 1596 202 0 0 chr5 17288005 17288307 -185797225 - AluJo SINE Alu -10 302 1 1968 120 31 0 chr5 17288370 17288661 -185796871 - AluSx SINE Alu -12 300 1 700 290 34 0 chr5 17289090 17289297 -185796235 + LTR33 LTR ERVL 1 214 -307 3986 171 23 32 chr5 17289899 17290010 -185795522 - L1MB7 LINE L1 -11 6173 6063 2156 96 0 0 chr5 17290010 17290290 -185795242 - AluSx SINE Alu -24 288 9 3986 171 23 32 chr5 17290290 17290662 -185794870 - L1MB7 LINE L1 -121 6063 5697 1621 161 12 43 chr5 17290662 17290984 -185794548 + AluJo SINE Alu 1 312 0 3986 171 23 32 chr5 17290984 17291319 -185794213 - L1MB7 LINE L1 -487 5697 5361 252 297 0 0 chr5 17291329 17291393 -185794139 - MER46C DNA MER2_type -3 335 272 2383 121 19 16 chr5 17292460 17292833 -185792699 + THE1C LTR MaLR 1 374 -1 335 217 0 0 chr5 17293113 17293173 -185792359 - MIR SINE MIR -107 101 42 818 293 111 40 chr5 17293842 17294043 -185791489 + L2 LINE L2 2771 2956 -357 2178 112 0 0 chr5 17294043 17294338 -185791194 - AluSx SINE Alu -16 296 2 818 293 111 40 chr5 17294338 17294636 -185790896 + L2 LINE L2 2956 3313 0 860 196 33 0 chr5 17294840 17294993 -185790539 - FRAM SINE Alu -5 161 4 231 167 0 0 chr5 17295548 17295590 -185789942 + (CA)n Simple_repeat Simple_repeat 2 43 0 2214 87 0 3 chr5 17296748 17297057 -185788475 - AluY SINE Alu -3 308 1 2253 62 31 0 chr5 17297059 17297349 -185788183 - AluSc SINE Alu -10 299 1 6530 168 28 54 chr5 17297921 17299352 -185786180 - L1MC3 LINE L1 -2 7783 6390 32 0 0 0 chr5 17300438 17300470 -185785062 + GC_rich Low_complexity Low_complexity 1 32 0 203 157 61 43 chr5 17300479 17300594 -185784938 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 * 234 296 0 0 chr5 17300573 17300671 -185784861 + (CCG)n Simple_repeat Simple_repeat 1 98 0 25 51 0 0 chr5 17301451 17301490 -185784042 + GC_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 17301778 17301799 -185783733 + (CGG)n Simple_repeat Simple_repeat 2 22 0 387 283 99 81 chr5 17303355 17303638 -185781894 + L3 LINE CR1 1286 1573 -4 279 352 62 25 chr5 17304038 17304200 -185781332 - MIR3 SINE MIR -31 177 10 701 219 113 42 chr5 17307052 17307290 -185778242 + L1ME1 LINE L1 5862 6116 -50 234 149 64 0 chr5 17307507 17307554 -185777978 + L1ME LINE L1 5388 5437 -684 381 75 0 0 chr5 17308242 17308295 -185777237 + (TG)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 17309175 17309198 -185776334 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2248 82 0 7 chr5 17309229 17309540 -185775992 - AluSg1 SINE Alu 0 312 4 5877 202 71 44 chr5 17312065 17313601 -185771931 - L1MC4 LINE L1 -76 7966 6390 915 164 0 4 chr5 17314254 17314499 -185771033 + CT-rich Low_complexity Low_complexity 1 244 0 1742 176 17 10 chr5 17314511 17314807 -185770725 - AluJb SINE Alu -14 298 1 2294 96 0 0 chr5 17315064 17315357 -185770175 + AluSc SINE Alu 1 293 -16 252 204 23 102 chr5 17315381 17315469 -185770063 + L1MB7 LINE L1 5996 6076 -108 1784 167 3 22 chr5 17315469 17315787 -185769745 + AluJo SINE Alu 1 312 0 241 271 102 8 chr5 17315844 17315962 -185769570 - MIR SINE MIR -56 206 78 2253 87 20 13 chr5 17316486 17316785 -185768747 - AluSc SINE Alu -8 301 1 2031 124 21 0 chr5 17317835 17318126 -185767406 - AluSx SINE Alu -15 297 1 273 258 96 107 chr5 17318524 17318658 -185766874 - MER5A DNA MER1_type -2 187 43 1450 216 28 0 chr5 17318658 17318940 -185766592 - AluJo SINE Alu -22 290 1 273 258 96 107 chr5 17318940 17318983 -185766549 - MER5A DNA MER1_type -146 43 1 1805 114 51 89 chr5 17319722 17319921 -185765611 - AluSg SINE Alu -6 304 120 2678 87 5 23 chr5 17319921 17320310 -185765222 - L1PA8 LINE L1 -3 6169 5788 1805 114 51 89 chr5 17320310 17320426 -185765106 - AluSg SINE Alu -190 120 1 2632 142 47 2 chr5 17322041 17322484 -185763048 - L1PA16 LINE L1 0 6166 5704 185 229 0 0 chr5 17323527 17323562 -185761970 + MIR SINE MIR 218 252 -10 183 129 0 0 chr5 17326147 17326178 -185759354 + (T)n Simple_repeat Simple_repeat 1 31 0 201 74 0 0 chr5 17326958 17326985 -185758547 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 215 255 0 0 chr5 17327385 17327432 -185758100 - L2 LINE L2 -2 3270 3224 2017 125 16 0 chr5 17327449 17327754 -185757778 - AluSx SINE Alu -2 310 1 2383 121 19 16 chr5 17328903 17329276 -185756256 - THE1C LTR MaLR -1 374 1 250 297 0 0 chr5 17330343 17330407 -185755125 + MER46C DNA MER2_type 272 335 -3 4024 171 23 32 chr5 17330417 17330752 -185754780 + L1MB7 LINE L1 5361 5697 -487 1700 171 12 40 chr5 17330752 17331073 -185754459 - AluJo SINE Alu 0 312 1 4024 171 23 32 chr5 17331073 17331445 -185754087 + L1MB7 LINE L1 5697 6063 -121 2282 96 0 0 chr5 17331445 17331725 -185753807 + AluSx SINE Alu 9 288 -24 4024 171 23 32 chr5 17331725 17331836 -185753696 + L1MB7 LINE L1 6063 6173 -11 677 290 34 0 chr5 17332438 17332645 -185752887 - LTR33 LTR ERVL -307 214 1 2067 117 31 7 chr5 17333074 17333365 -185752167 + AluSx SINE Alu 1 298 -14 1701 201 0 0 chr5 17333428 17333727 -185751805 + AluJo SINE Alu 1 299 -13 732 225 58 5 chr5 17333768 17333959 -185751573 + MIR SINE MIR 6 206 -56 582 104 0 0 chr5 17336537 17336633 -185748899 + (TGGA)n Simple_repeat Simple_repeat 3 98 0 483 295 109 0 chr5 17336795 17336978 -185748554 + MIR SINE MIR 4 206 -56 2355 69 31 0 chr5 17337321 17337611 -185747921 + AluSc SINE Alu 1 299 -10 2332 87 0 3 chr5 17337613 17337922 -185747610 + AluY SINE Alu 1 308 -3 231 167 0 0 chr5 17339082 17339124 -185746408 + (TG)n Simple_repeat Simple_repeat 2 43 0 857 196 33 0 chr5 17339679 17339832 -185745700 + FRAM SINE Alu 4 161 -5 657 291 111 40 chr5 17340036 17340334 -185745198 - L2 LINE L2 0 3313 2956 2307 112 0 0 chr5 17340334 17340629 -185744903 + AluSx SINE Alu 2 296 -16 657 291 111 40 chr5 17340629 17340830 -185744702 - L2 LINE L2 -357 2956 2771 226 234 0 0 chr5 17341499 17341546 -185743986 + MIR SINE MIR 42 88 -120 24 0 0 29 chr5 17342460 17342479 -185743053 + AT_rich Low_complexity Low_complexity 1 20 -14 2135 120 3 7 chr5 17342479 17342771 -185742761 - AluSx SINE Alu -21 291 1 24 0 0 29 chr5 17342771 17342786 -185742746 + AT_rich Low_complexity Low_complexity 20 34 0 1117 187 53 78 chr5 17342794 17342931 -185742601 - AluJo SINE Alu -35 277 149 2227 103 10 0 chr5 17342931 17343231 -185742301 - AluSq SINE Alu -10 303 1 1117 187 53 78 chr5 17343231 17343377 -185742155 - AluJo SINE Alu -163 149 1 2511 58 3 0 chr5 17343657 17343949 -185741583 - AluY SINE Alu -18 293 1 287 232 167 51 chr5 17346118 17346256 -185739276 + Charlie1 DNA MER1_type 1419 1572 -1189 198 0 0 0 chr5 17348550 17348572 -185736960 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 236 307 109 0 chr5 17348799 17348936 -185736596 - MIR SINE MIR -27 235 84 600 213 89 6 chr5 17349566 17349735 -185735797 + L1MC5 LINE L1 7720 7902 -59 1914 133 151 34 chr5 17350800 17351183 -185734349 + MSTA LTR MaLR 1 428 0 208 314 85 8 chr5 17353245 17353363 -185732169 - MIR SINE MIR -36 226 100 189 0 0 0 chr5 17354982 17355003 -185730529 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 397 242 40 16 chr5 17355075 17355199 -185730333 + L2 LINE L2 3114 3240 -73 219 186 0 0 chr5 17356319 17356362 -185729170 + (TA)n Simple_repeat Simple_repeat 1 43 0 226 125 54 0 chr5 17356363 17356419 -185729113 - L1MCa LINE L1 -4362 2064 2006 267 157 0 0 chr5 17356424 17356475 -185729057 + (TA)n Simple_repeat Simple_repeat 2 52 0 249 262 70 66 chr5 17356529 17356773 -185728759 + L1MC4a LINE L1 5786 6030 -1778 2512 241 143 51 chr5 17357177 17358482 -185727050 + L1MC5 LINE L1 6512 7925 -36 721 176 171 9 chr5 17358643 17358851 -185726681 - MLT1A1 LTR MaLR -125 249 1 813 176 149 0 chr5 17359200 17359388 -185726144 + L1MB7 LINE L1 5953 6168 -16 299 239 145 8 chr5 17362655 17362772 -185722760 + L1ME LINE L1 85 217 -5853 478 223 10 114 chr5 17362817 17363010 -185722522 + L1ME LINE L1 438 610 -5460 250 303 53 0 chr5 17365912 17365988 -185719544 + L2 LINE L2 3223 3302 -11 1522 158 19 15 chr5 17366012 17366278 -185719254 + AluSx SINE Alu 41 307 -5 192 135 0 0 chr5 17366279 17366316 -185719216 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 21 82 0 0 chr5 17366876 17366925 -185718607 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 17367793 17367821 -185717711 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 17368145 17368180 -185717352 + AT_rich Low_complexity Low_complexity 1 35 0 212 260 0 0 chr5 17368554 17368604 -185716928 + (CATA)n Simple_repeat Simple_repeat 3 52 0 250 306 20 10 chr5 17374253 17374351 -185711181 + MIR SINE MIR 45 143 -119 259 250 56 69 chr5 17375781 17375925 -185709607 - L1ME3 LINE L1 -66 6096 5955 2278 163 60 8 chr5 17375926 17376326 -185709206 + MSTB LTR MaLR 1 421 -5 538 262 74 37 chr5 17376403 17376445 -185709087 - L1ME3 LINE L1 -222 5948 5909 2187 143 37 8 chr5 17376445 17376796 -185708736 + MER46B DNA MER2_type 1 236 0 538 262 74 37 chr5 17376796 17376997 -185708535 - L1ME3 LINE L1 -261 5909 5696 1556 81 61 0 chr5 17377936 17378134 -185707398 + AluSg/x SINE Alu 72 281 -29 291 200 46 15 chr5 17378151 17378216 -185707316 - Charlie1b DNA MER1_type -46 477 411 1514 229 98 10 chr5 17378246 17378644 -185706888 - Charlie1b DNA MER1_type -90 433 1 1469 152 65 14 chr5 17378692 17378969 -185706563 + AluJb SINE Alu 1 291 -21 304 303 138 0 chr5 17381379 17381488 -185704044 + MIR SINE MIR 90 213 -49 291 274 69 10 chr5 17383276 17383378 -185702154 + L2 LINE L2 3155 3262 -10 203 323 62 8 chr5 17383458 17383588 -185701944 + MIR SINE MIR 96 232 -30 2357 96 0 0 chr5 17384248 17384549 -185700983 - AluSg SINE Alu -9 301 1 1038 186 10 29 chr5 17389542 17389746 -185695786 + AluJo SINE Alu 87 286 -26 731 283 68 0 chr5 17390123 17390342 -185695190 + MIR SINE MIR 7 240 -22 22 0 0 0 chr5 17390663 17390685 -185694847 + AT_rich Low_complexity Low_complexity 1 22 0 277 289 134 43 chr5 17392628 17392815 -185692717 + MIR SINE MIR 11 214 -48 261 295 50 58 chr5 17393381 17393520 -185692012 - MIR SINE MIR -89 173 36 1214 176 8 64 chr5 17394983 17395233 -185690299 + MER46A DNA MER2_type 1 236 0 835 200 126 33 chr5 17395423 17395638 -185689894 + L1MB8 LINE L1 5939 6173 -5 842 143 0 16 chr5 17396372 17396498 -185689034 + FLAM_C SINE Alu 5 128 -5 24 0 0 0 chr5 17396498 17396522 -185689010 + AT_rich Low_complexity Low_complexity 1 24 0 193 371 63 25 chr5 17396805 17396964 -185688568 - MIR SINE MIR -64 198 34 28 86 0 0 chr5 17397354 17397424 -185688108 + AT_rich Low_complexity Low_complexity 1 70 0 1455 186 39 39 chr5 17398240 17398552 -185686980 + AluJo SINE Alu 1 312 0 603 150 42 58 chr5 17398578 17398698 -185686834 + AluJo SINE Alu 87 204 -108 1779 163 0 30 chr5 17398828 17399129 -185686403 - AluJb SINE Alu -16 296 5 237 231 333 8 chr5 17399735 17399852 -185685680 - L2 LINE L2 0 3313 3159 383 237 86 20 chr5 17400156 17400308 -185685224 + MIR SINE MIR 65 226 -36 254 247 34 45 chr5 17401313 17401402 -185684130 - MIR SINE MIR -36 226 139 260 156 0 0 chr5 17401874 17401919 -185683613 + MER20B DNA MER1_type 43 87 -696 318 26 0 0 chr5 17401956 17401995 -185683537 + (CA)n Simple_repeat Simple_repeat 2 40 0 607 256 43 6 chr5 17402072 17402236 -185683296 + MER20B DNA MER1_type 288 457 -326 482 222 141 65 chr5 17402918 17403103 -185682429 + MER58A DNA MER1_type 9 207 -17 24 32 0 0 chr5 17403214 17403245 -185682287 + AT_rich Low_complexity Low_complexity 1 31 0 1021 78 0 0 chr5 17403437 17403565 -185681967 - AluSg/x SINE Alu -6 306 179 1436 185 114 81 chr5 17406467 17407041 -185678491 + MLT1E1 LTR MaLR 2 641 -13 204 236 67 34 chr5 17407341 17407430 -185678102 - MIR3 SINE MIR -36 172 81 36 23 0 0 chr5 17408027 17408070 -185677462 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 17408163 17408188 -185677344 + AT_rich Low_complexity Low_complexity 1 25 0 187 238 0 0 chr5 17409132 17409174 -185676358 - MIR3 SINE MIR -5 203 162 330 286 34 25 chr5 17409645 17409659 -185675873 + MER5A DNA MER1_type 3 17 -172 246 308 128 15 chr5 17409659 17409792 -185675740 - MER5A DNA MER1_type -2 187 40 334 203 0 0 chr5 17409940 17410004 -185675528 + MER112 DNA MER1_type 4 67 -193 14371 116 50 25 chr5 17410007 17412295 -185673237 - Tigger1 DNA MER2_type -19 2399 55 210 143 0 0 chr5 17412296 17412331 -185673201 + (GAA)n Simple_repeat Simple_repeat 2 36 0 269 212 68 76 chr5 17412403 17412521 -185673011 + MER112 DNA MER1_type 79 195 -65 260 290 97 11 chr5 17412615 17412708 -185672824 - MER5A DNA MER1_type -63 126 26 305 247 75 0 chr5 17415390 17415483 -185670049 + MIR SINE MIR 7 106 -156 788 262 104 9 chr5 17416226 17416447 -185669085 - MIR SINE MIR -9 253 12 246 333 56 0 chr5 17416741 17416831 -185668701 - MIR3 SINE MIR -6 202 108 259 192 10 40 chr5 17418962 17419061 -185666471 + (TA)n Simple_repeat Simple_repeat 2 97 0 213 193 18 35 chr5 17419091 17419148 -185666384 + GA-rich Low_complexity Low_complexity 5 60 0 1598 156 6 95 chr5 17420198 17420524 -185665008 - AluJo SINE Alu -15 297 1 21 36 0 0 chr5 17420734 17420762 -185664770 + AT_rich Low_complexity Low_complexity 1 28 0 255 303 11 22 chr5 17421384 17421473 -185664059 + G-rich Low_complexity Low_complexity 5 92 0 180 77 0 0 chr5 17421724 17421750 -185663782 + (CAA)n Simple_repeat Simple_repeat 2 27 0 262 221 151 0 chr5 17423180 17423266 -185662266 + MIR SINE MIR 72 170 -92 1126 214 148 28 chr5 17423434 17423793 -185661739 - MER57B LTR ERV1 -32 402 1 3295 194 57 16 chr5 17423794 17424621 -185660911 - L1ME1 LINE L1 -122 6044 5195 180 0 0 0 chr5 17424621 17424641 -185660891 + (TC)n Simple_repeat Simple_repeat 2 21 0 866 178 0 33 chr5 17424641 17424793 -185660739 - FRAM SINE Alu -30 146 1 335 122 10 31 chr5 17424795 17424893 -185660639 + (TG)n Simple_repeat Simple_repeat 2 97 0 418 129 12 59 chr5 17424921 17425091 -185660441 + (TG)n Simple_repeat Simple_repeat 1 162 0 782 147 17 0 chr5 17425091 17425207 -185660325 - FLAM_C SINE Alu -23 120 3 585 232 138 6 chr5 17425209 17425390 -185660142 - L1ME1 LINE L1 -950 5196 4992 1552 189 10 7 chr5 17425996 17426298 -185659234 + AluJb SINE Alu 1 303 -9 2037 134 3 7 chr5 17426323 17426622 -185658910 + AluSx SINE Alu 1 298 -14 606 212 35 24 chr5 17427415 17427585 -185657947 - MIR SINE MIR -5 257 86 443 307 98 16 chr5 17429031 17429275 -185656257 - MARNA DNA Mariner -95 491 228 269 232 53 53 chr5 17429281 17429376 -185656156 - MLT1H LTR MaLR -1 548 454 26 50 0 0 chr5 17429386 17429426 -185656106 + AT_rich Low_complexity Low_complexity 1 40 0 1809 142 14 142 chr5 17429437 17429854 -185655678 - THE1B LTR MaLR 0 364 1 1229 67 6 39 chr5 17429923 17430101 -185655431 + MER30 DNA MER1_type 1 172 -58 2189 53 15 0 chr5 17430214 17430479 -185655053 - L1PA4 LINE L1 0 6155 5887 2452 77 3 6 chr5 17431054 17431367 -185654165 - AluSp SINE Alu -1 312 1 341 288 97 45 chr5 17431780 17432068 -185653464 - L2 LINE L2 0 3313 3011 1700 124 158 0 chr5 17433124 17433389 -185652143 - AluSx SINE Alu -5 307 1 222 243 27 40 chr5 17433877 17433951 -185651581 + MIR3 SINE MIR 135 207 -1 279 257 134 37 chr5 17434049 17434236 -185651296 + L1ME4a LINE L1 5850 6054 -67 2420 202 58 22 chr5 17434255 17434756 -185650776 + LTR40a LTR ERVL 1 519 0 265 246 0 18 chr5 17434783 17434840 -185650692 + LTR67 LTR ERVL 499 554 -3 181 282 14 14 chr5 17434965 17435036 -185650496 - L2 LINE L2 -20 3252 3182 309 191 174 61 chr5 17435580 17435695 -185649837 + MIR SINE MIR 19 146 -116 2366 92 0 7 chr5 17435901 17436206 -185649326 - AluSx SINE Alu -9 303 1 3125 224 87 50 chr5 17436492 17437561 -185647971 + L1MC4 LINE L1 6935 8042 0 1501 152 0 69 chr5 17439809 17440098 -185645434 + AluJb SINE Alu 40 308 -4 407 103 15 44 chr5 17440788 17440856 -185644676 - AluJo SINE Alu -11 301 236 939 190 11 17 chr5 17440857 17441031 -185644501 - AluJo SINE Alu -139 173 1 1734 151 31 17 chr5 17442321 17442613 -185642919 + AluJo SINE Alu 2 297 -15 549 211 99 14 chr5 17443885 17444027 -185641505 + MIR SINE MIR 1 154 -108 2135 138 0 0 chr5 17445464 17445768 -185639764 + AluSx SINE Alu 1 304 -8 409 312 59 15 chr5 17450151 17450353 -185635179 + L3 LINE CR1 667 877 -700 1735 164 15 0 chr5 17451517 17451785 -185633747 - AluJo SINE Alu -40 272 1 2275 91 0 28 chr5 17452211 17452530 -185633002 - AluSx SINE Alu 0 312 3 1246 154 133 87 chr5 17452606 17452892 -185632640 + AluJb SINE Alu 1 299 -3 22 0 0 0 chr5 17452901 17452923 -185632609 + AT_rich Low_complexity Low_complexity 1 22 0 420 320 31 0 chr5 17453711 17453839 -185631693 - MER94 DNA DNA -2 132 1 1372 161 88 19 chr5 17455598 17455859 -185629673 + AluJb SINE Alu 1 279 -33 2391 65 3 0 chr5 17455861 17456151 -185629381 - AluY SINE Alu -20 291 1 708 156 0 74 chr5 17456183 17456318 -185629214 - FLAM_C SINE Alu -7 126 2 476 92 0 40 chr5 17457032 17457108 -185628424 + L1PA8 LINE L1 6094 6166 -6 1106 216 151 26 chr5 17457191 17457576 -185627956 - Charlie4a DNA MER1_type -37 471 39 2041 97 38 60 chr5 17458829 17459148 -185626384 + AluSx SINE Alu 1 312 0 315 278 68 30 chr5 17460230 17460363 -185625169 + L1MC4 LINE L1 7904 8041 -1 1887 125 16 0 chr5 17461536 17461839 -185623693 + AluSx SINE Alu 1 308 -4 203 204 114 0 chr5 17461856 17461900 -185623632 + L2 LINE L2 3224 3272 0 201 74 0 0 chr5 17462300 17462327 -185623205 + (TCTCCC)n Simple_repeat Simple_repeat 1 27 0 202 229 0 0 chr5 17465697 17465732 -185619800 - MIR SINE MIR -10 252 218 2622 142 47 2 chr5 17466773 17467216 -185618316 + L1PA16 LINE L1 5704 6166 0 1805 114 53 37 chr5 17468831 17468947 -185616585 + AluSg SINE Alu 1 114 -196 2797 88 0 13 chr5 17468947 17469324 -185616208 + L1PA8 LINE L1 5788 6159 -13 197 33 33 0 chr5 17469329 17469359 -185616173 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1805 114 53 37 chr5 17469359 17469535 -185615997 + AluSg SINE Alu 117 304 -6 319 258 96 107 chr5 17470273 17470316 -185615216 + MER5B DNA MER1_type 1 43 -135 1352 216 28 0 chr5 17470316 17470598 -185614934 + AluJo SINE Alu 1 290 -22 319 258 96 107 chr5 17470598 17470732 -185614800 + MER5B DNA MER1_type 43 176 -2 1908 124 21 0 chr5 17471130 17471421 -185614111 + AluSx SINE Alu 1 297 -15 2113 90 20 13 chr5 17472470 17472769 -185612763 + AluSc SINE Alu 1 301 -8 299 272 99 7 chr5 17473280 17473417 -185612115 + MIR SINE MIR 64 213 -49 1737 168 3 16 chr5 17473468 17473784 -185611748 - AluJo SINE Alu 0 312 1 248 204 23 102 chr5 17473784 17473872 -185611660 - L1MB7 LINE L1 -108 6076 5996 2171 96 0 0 chr5 17473896 17474189 -185611343 - AluSc SINE Alu -16 293 1 1624 170 17 10 chr5 17474443 17474731 -185610801 + AluJb SINE Alu 1 290 -22 954 144 0 0 chr5 17474731 17474911 -185610621 + (GA)n Simple_repeat Simple_repeat 1 180 0 537 185 0 0 chr5 17474912 17475031 -185610501 + GA-rich Low_complexity Low_complexity 2 120 0 5639 201 78 43 chr5 17475684 17477208 -185608324 + L1MC4 LINE L1 6390 7966 -76 2124 82 0 7 chr5 17479716 17480027 -185605505 + AluSg1 SINE Alu 4 312 0 186 43 0 0 chr5 17480058 17480081 -185605451 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 363 78 0 0 chr5 17480961 17481012 -185604520 + (CA)n Simple_repeat Simple_repeat 2 52 0 233 149 64 0 chr5 17481700 17481747 -185603785 - L1ME LINE L1 -684 5437 5388 710 214 168 32 chr5 17481914 17482202 -185603330 - L1ME1 LINE L1 -50 6116 5862 279 352 62 25 chr5 17485055 17485217 -185600315 + MIR3 SINE MIR 10 177 -31 387 283 99 81 chr5 17485617 17485900 -185599632 - L3 LINE CR1 -4 1573 1286 189 0 0 0 chr5 17487456 17487477 -185598055 + (CCG)n Simple_repeat Simple_repeat 2 22 0 25 51 0 0 chr5 17487765 17487804 -185597728 + GC_rich Low_complexity Low_complexity 1 39 0 234 296 0 0 chr5 17488583 17488681 -185596851 + (CGG)n Simple_repeat Simple_repeat 1 98 0 203 157 61 43 chr5 17488660 17488775 -185596757 + (CCGCG)n Simple_repeat Simple_repeat 5 121 0 * 32 0 0 0 chr5 17488784 17488816 -185596716 + GC_rich Low_complexity Low_complexity 1 32 0 6515 168 28 54 chr5 17489902 17491333 -185594199 + L1MC3 LINE L1 6390 7783 -2 2336 60 30 0 chr5 17491905 17492205 -185593327 + AluSc SINE Alu 1 309 0 2190 91 0 3 chr5 17492213 17492522 -185593010 + AluY SINE Alu 1 308 -3 231 167 0 0 chr5 17493680 17493722 -185591810 + (TG)n Simple_repeat Simple_repeat 2 43 0 845 199 33 0 chr5 17494277 17494428 -185591104 + FRAM SINE Alu 4 159 -7 812 293 111 40 chr5 17494632 17494930 -185590602 - L2 LINE L2 0 3313 2956 2178 112 0 0 chr5 17494930 17495225 -185590307 + AluSx SINE Alu 2 296 -16 812 293 111 40 chr5 17495225 17495426 -185590106 - L2 LINE L2 -357 2956 2771 334 217 0 0 chr5 17496095 17496155 -185589377 + MIR SINE MIR 42 101 -107 2383 121 19 16 chr5 17496435 17496808 -185588724 - THE1C LTR MaLR -1 374 1 252 297 0 0 chr5 17497875 17497939 -185587593 + MER46C DNA MER2_type 272 335 -3 3945 171 23 35 chr5 17497949 17498287 -185587245 + L1MB7 LINE L1 5361 5702 -482 1612 166 12 44 chr5 17498287 17498607 -185586925 - AluJo SINE Alu -2 310 1 3945 171 23 35 chr5 17498607 17498979 -185586553 + L1MB7 LINE L1 5702 6062 -122 2140 100 0 0 chr5 17498979 17499259 -185586273 + AluSx SINE Alu 9 288 -24 3945 171 23 35 chr5 17499259 17499370 -185586162 + L1MB7 LINE L1 6062 6173 -11 700 290 34 0 chr5 17499972 17500179 -185585353 - LTR33 LTR ERVL -307 214 1 1968 120 31 0 chr5 17500608 17500899 -185584633 + AluSx SINE Alu 1 300 -12 1542 209 0 0 chr5 17500962 17501264 -185584268 + AluJo SINE Alu 1 302 -10 820 258 50 50 chr5 17501299 17501559 -185583973 + MIR SINE MIR 3 262 0 546 109 0 0 chr5 17504071 17504163 -185581369 + (TGGA)n Simple_repeat Simple_repeat 3 94 0 554 295 109 0 chr5 17504325 17504508 -185581024 + MIR SINE MIR 4 206 -56 1912 106 40 0 chr5 17504851 17505159 -185580373 + AluSq SINE Alu 1 319 0 197 289 87 87 chr5 17505591 17505695 -185579837 + L2 LINE L2 3201 3304 -9 214 209 93 0 chr5 17506210 17506253 -185579279 - L2 LINE L2 -10 3303 3257 2270 93 0 6 chr5 17506337 17506650 -185578882 + AluSq SINE Alu 2 312 -1 403 194 61 31 chr5 17506855 17506953 -185578579 + MLT1J2 LTR MaLR 19 119 -331 408 207 189 9 chr5 17507048 17507165 -185578367 + MLT1I LTR MaLR 277 446 0 2208 92 7 0 chr5 17507256 17507549 -185577983 - AluSp SINE Alu -18 295 1 230 244 12 24 chr5 17507880 17507962 -185577570 + L2 LINE L2 1792 1872 -1442 432 343 130 25 chr5 17508470 17509076 -185576456 + L2 LINE L2 2004 2673 -641 1947 130 0 13 chr5 17509197 17509361 -185576171 - AluSx SINE Alu -15 297 132 2149 108 3 0 chr5 17509361 17509658 -185575874 - AluSq SINE Alu -15 298 1 1947 130 0 13 chr5 17509658 17509728 -185575804 - AluSx SINE Alu -179 133 2 487 92 0 0 chr5 17509728 17509793 -185575739 - AluS SINE Alu -247 66 2 649 236 176 5 chr5 17510074 17510273 -185575259 + LTR16A LTR ERVL 25 257 -193 1116 194 144 19 chr5 17510776 17510883 -185574649 + AluJo SINE Alu 7 99 -213 378 0 0 0 chr5 17510883 17510925 -185574607 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1116 194 144 19 chr5 17510925 17511080 -185574452 + AluJo SINE Alu 99 302 -10 1941 157 3 10 chr5 17511570 17511869 -185573663 - AluSx SINE Alu -13 299 3 439 303 15 8 chr5 17513945 17514077 -185571455 + MARNA DNA Mariner 61 193 -393 284 231 44 66 chr5 17514273 17514364 -185571168 + L1ME4a LINE L1 5960 6048 -73 323 257 176 20 chr5 17514493 17514641 -185570891 + MARNA DNA Mariner 208 378 -208 389 229 28 28 chr5 17514641 17514750 -185570782 + L2 LINE L2 3204 3312 -1 2257 105 0 0 chr5 17515139 17515446 -185570086 - AluSq SINE Alu 0 307 1 320 318 26 0 chr5 17515477 17515628 -185569904 - MIR SINE MIR -10 252 98 1332 223 62 101 chr5 17515689 17515764 -185569768 + MLT2B2 LTR ERVL 1 77 -438 2400 70 0 0 chr5 17515764 17516049 -185569483 + AluY SINE Alu 1 285 -26 1332 223 62 101 chr5 17516049 17516507 -185569025 + MLT2B2 LTR ERVL 77 513 -2 2869 150 13 42 chr5 17516643 17517189 -185568343 + LTR26B LTR ERV1 2 531 0 2112 103 11 0 chr5 17518021 17518340 -185567192 + AluSc SINE Alu 6 327 0 750 251 135 59 chr5 17518804 17519331 -185566201 + MLT1G1 LTR MaLR 1 529 -38 248 198 136 25 chr5 17519553 17519634 -185565898 + MIR SINE MIR 123 212 -50 427 254 25 25 chr5 17519854 17519976 -185565556 - L2 LINE L2 -1 3312 3191 1609 156 6 95 chr5 17520760 17521086 -185564446 - AluJo SINE Alu -15 297 1 22 35 0 0 chr5 17521296 17521325 -185564207 + AT_rich Low_complexity Low_complexity 1 29 0 255 303 11 22 chr5 17521947 17522036 -185563496 + G-rich Low_complexity Low_complexity 5 92 0 180 77 0 0 chr5 17522287 17522313 -185563219 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1873 181 36 0 chr5 17523331 17523667 -185561865 - MER7A DNA MER2_type 0 346 1 2416 73 0 0 chr5 17524810 17525096 -185560436 + AluSx SINE Alu 15 300 -12 190 312 167 22 chr5 17525974 17526112 -185559420 + MIR3 SINE MIR 17 174 -34 21 36 0 0 chr5 17527761 17527789 -185557743 + AT_rich Low_complexity Low_complexity 1 28 0 2713 107 0 3 chr5 17528869 17529234 -185556298 + THE1B LTR MaLR 1 364 0 542 261 113 15 chr5 17530639 17530842 -185554690 - MIR SINE MIR -12 250 28 594 287 143 0 chr5 17533374 17533597 -185551935 - MIR SINE MIR -2 260 6 2282 272 123 26 chr5 17534619 17535743 -185549789 - L1MC4 LINE L1 0 7808 6613 750 200 7 5 chr5 17535747 17536316 -185549216 + (TCCA)n Simple_repeat Simple_repeat 1 570 0 349 251 6 12 chr5 17536390 17536553 -185548979 + (CCCA)n Simple_repeat Simple_repeat 2 163 0 588 249 80 24 chr5 17536553 17536766 -185548766 - L1MC4 LINE L1 -1355 6687 6463 183 273 0 0 chr5 17537180 17537224 -185548308 - L2 LINE L2 -22 3250 3207 319 269 9 19 chr5 17537257 17537365 -185548167 + T-rich Low_complexity Low_complexity 3 109 0 2159 116 0 10 chr5 17538156 17538450 -185547082 - AluSx SINE Alu -21 291 1 22 0 0 0 chr5 17540051 17540073 -185545459 + AT_rich Low_complexity Low_complexity 1 22 0 292 218 85 128 chr5 17541189 17541377 -185544155 - MER3 DNA MER1_type 0 209 30 244 274 66 28 chr5 17545233 17545339 -185540193 + MER5A DNA MER1_type 23 132 -57 1211 131 0 0 chr5 17547829 17547997 -185537535 - AluSg/x SINE Alu -13 299 132 2167 100 50 13 chr5 17547997 17548162 -185537370 - AluSx SINE Alu 0 312 130 2273 107 0 3 chr5 17548162 17548462 -185537070 - AluSx SINE Alu -13 299 1 2167 100 50 13 chr5 17548462 17548597 -185536935 - AluSx SINE Alu -182 130 1 232 250 15 15 chr5 17549882 17549950 -185535582 + (CA)n Simple_repeat Simple_repeat 1 68 0 22 35 0 0 chr5 17550168 17550197 -185535335 + AT_rich Low_complexity Low_complexity 1 29 0 2420 67 0 10 chr5 17550756 17551055 -185534477 + AluSc SINE Alu 1 296 -13 1153 295 45 22 chr5 17551673 17552181 -185533351 + MER20B DNA MER1_type 264 783 0 662 271 92 75 chr5 17552305 17552759 -185532773 + MLT1J LTR MaLR 1 462 -49 1484 95 128 128 chr5 17655422 17655663 -185429869 + L1MCa LINE L1 1706 1946 -4480 2161 115 0 3 chr5 17655663 17655975 -185429557 - AluY SINE Alu 0 311 1 1484 95 128 128 chr5 17655975 17655996 -185429536 + L1MCa LINE L1 1946 1966 -4460 2002 124 13 19 chr5 17655996 17656310 -185429222 - AluSx SINE Alu 0 312 1 1484 95 128 128 chr5 17656310 17656437 -185429095 + L1MCa LINE L1 1965 2096 -4330 986 279 182 21 chr5 17657686 17658170 -185427362 - L2 LINE L2 -386 2928 2367 712 161 42 14 chr5 17658341 17658484 -185427048 + Charlie4 DNA MER1_type 1815 1961 0 1826 186 0 3 chr5 17658507 17658814 -185426718 - LOR1a LTR ERV1 0 497 192 2644 105 32 2 chr5 17658814 17659214 -185426318 + LOR1-int LTR ERV1 2946 3357 -4763 745 193 50 22 chr5 17659226 17659407 -185426125 + LOR1a LTR ERV1 266 451 -46 273 98 0 0 chr5 17659708 17659749 -185425783 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 225 0 0 0 chr5 17659875 17659900 -185425632 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2211 181 78 71 chr5 17660276 17660811 -185424721 - MLT1F LTR MaLR 0 542 4 433 0 35 0 chr5 17661099 17661156 -185424376 + (TG)n Simple_repeat Simple_repeat 2 60 0 374 212 10 0 chr5 17661974 17662073 -185423459 + CT-rich Low_complexity Low_complexity 4 103 0 304 301 24 48 chr5 17662316 17662482 -185423050 + LTR16A LTR ERVL 1 162 -288 1214 167 20 80 chr5 17662673 17662972 -185422560 - LTR55 LTR ERV -266 282 2 2361 87 0 13 chr5 17662990 17663299 -185422233 - AluSg SINE Alu -5 305 1 327 365 0 0 chr5 17663638 17663745 -185421787 + L2 LINE L2 3182 3288 -25 279 0 0 0 chr5 17663746 17663777 -185421755 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 243 94 0 94 chr5 17664115 17664168 -185421364 - L1MA10 LINE L1 -2 6332 6285 680 174 14 7 chr5 17664171 17664235 -185421297 - MLT1A1 LTR MaLR 0 365 303 2272 98 6 16 chr5 17664235 17664551 -185420981 + AluSq SINE Alu 1 313 0 680 174 14 7 chr5 17664551 17664624 -185420908 - MLT1A1 LTR MaLR -62 303 227 439 188 20 30 chr5 17664823 17664924 -185420608 - MLT1A1 LTR MaLR -265 100 1 351 109 0 31 chr5 17664924 17664988 -185420544 - L1MA10 LINE L1 -48 6286 6225 242 194 16 16 chr5 17665249 17665311 -185420221 - L1P LINE L1 -948 5198 5137 1701 136 40 48 chr5 17665488 17665864 -185419668 - L1MA8 LINE L1 -10 6281 5909 1922 190 16 13 chr5 17665866 17666250 -185419282 - MSTD LTR MaLR -11 385 1 3729 151 35 0 chr5 17666250 17667305 -185418227 - L1MA8 LINE L1 -379 5912 4825 209 222 0 0 chr5 17667905 17667950 -185417582 + (TTA)n Simple_repeat Simple_repeat 2 46 0 848 242 123 89 chr5 17667954 17668491 -185417041 - MLT1L LTR MaLR -56 559 5 21 57 0 0 chr5 17668782 17668817 -185416715 + AT_rich Low_complexity Low_complexity 1 35 0 345 264 68 47 chr5 17670111 17670259 -185415273 - MIR SINE MIR -38 224 74 234 0 0 0 chr5 17671213 17671239 -185414293 + (A)n Simple_repeat Simple_repeat 1 26 0 334 173 0 25 chr5 17671606 17671687 -185413845 - Charlie4 DNA MER1_type -1829 132 54 6295 92 6 0 chr5 17671869 17672775 -185412757 - L1P LINE L1 -1751 4395 3485 7057 54 6 6 chr5 17672778 17673754 -185411778 + L1PA8 LINE L1 5184 6159 -13 215 266 138 18 chr5 17673913 17674022 -185411510 - MIR SINE MIR 0 262 141 498 223 84 9 chr5 17674152 17674395 -185411137 + MER33 DNA MER1_type 1 361 -2 403 338 136 26 chr5 17674403 17674456 -185411076 - L2 LINE L2 -4 3309 3263 2080 161 64 5 chr5 17674456 17674860 -185410672 - MSTA LTR MaLR 0 428 1 403 338 136 26 chr5 17674860 17675152 -185410380 - L2 LINE L2 -50 3263 2926 400 204 57 70 chr5 17676814 17676971 -185408561 - Charlie4 DNA MER1_type 0 1961 1807 6319 165 46 19 chr5 17676971 17678312 -185407220 + L1MCa LINE L1 1 1377 -5049 34406 88 17 17 chr5 17678416 17683757 -185401775 + L1P LINE L1 50 5393 -753 182 271 51 34 chr5 17683918 17683977 -185401555 + MIR3 SINE MIR 118 177 -31 24 0 0 0 chr5 17684039 17684063 -185401469 + AT_rich Low_complexity Low_complexity 1 24 0 3586 134 4 9 chr5 17684491 17685021 -185400511 - MER1A DNA MER1_type 0 527 1 210 301 68 80 chr5 17685145 17685321 -185400211 + L3b LINE CR1 1322 1495 -88 222 37 0 0 chr5 17685322 17685349 -185400183 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 218 254 91 0 chr5 17685666 17685721 -185399811 + L3 LINE CR1 1425 1484 -93 233 179 12 0 chr5 17685868 17685952 -185399580 + (CA)n Simple_repeat Simple_repeat 1 85 0 528 221 8 25 chr5 17687174 17687296 -185398236 + MER94 DNA DNA 3 122 -12 22 0 0 0 chr5 17689204 17689226 -185396306 + AT_rich Low_complexity Low_complexity 1 22 0 734 189 47 21 chr5 17689538 17689728 -185395804 - MER20 DNA MER1_type -7 212 18 3789 155 138 7 chr5 17689814 17690544 -185394988 + LTR1B LTR ERV1 1 826 0 200 215 46 15 chr5 17690632 17690697 -185394835 - L3b LINE CR1 -197 1386 1320 273 330 146 0 chr5 17692176 17692279 -185393253 - L2 LINE L2 -5 3308 3191 1057 224 149 17 chr5 17692617 17693019 -185392513 + L1MC4 LINE L1 7438 7892 -150 1797 173 35 3 chr5 17693064 17693406 -185392126 - MLT2C2 LTR ERVL -111 353 1 283 311 74 7 chr5 17693452 17693587 -185391945 - L2 LINE L2 -924 2390 2247 313 278 20 80 chr5 17693906 17693992 -185391540 + MIR SINE MIR 65 140 -122 2428 103 0 0 chr5 17693992 17694304 -185391228 + AluSq SINE Alu 1 312 -1 313 278 20 80 chr5 17694304 17694368 -185391164 + MIR SINE MIR 140 206 -56 2494 64 0 0 chr5 17694432 17694729 -185390803 + AluY SINE Alu 1 297 -14 509 182 101 0 chr5 17695430 17695529 -185390003 - L2 LINE L2 -4 3309 3201 180 371 57 0 chr5 17695538 17695608 -185389924 - L2 LINE L2 -10 3262 3189 3410 169 12 2 chr5 17695738 17696342 -185389190 - MER72 LTR ERV1 -22 700 91 25 0 0 0 chr5 17696726 17696751 -185388781 + AT_rich Low_complexity Low_complexity 1 25 0 180 77 0 0 chr5 17696889 17696915 -185388617 + (CA)n Simple_repeat Simple_repeat 2 27 0 328 410 87 3 chr5 17696945 17697255 -185388277 - L2 LINE L2 -512 2802 2467 197 274 53 95 chr5 17698367 17698462 -185387070 - MER5A DNA MER1_type -7 182 92 308 344 91 82 chr5 17700024 17700364 -185385168 - L2 LINE L2 -105 3167 2825 595 325 68 37 chr5 17701140 17701598 -185383934 - L1MEd LINE L1 -5204 915 444 442 328 45 76 chr5 17701691 17702048 -185383484 - L1MEd LINE L1 -5770 349 4 204 300 33 0 chr5 17703313 17703373 -185382159 + MIR SINE MIR 9 70 -192 2088 175 8 3 chr5 17703401 17703784 -185381748 + MLT1B LTR MaLR 6 390 0 2043 144 73 52 chr5 17703828 17703888 -185381644 - MSTB1 LTR MaLR 0 432 375 2358 98 0 3 chr5 17703888 17704194 -185381338 - AluY SINE Alu -6 305 1 2043 144 73 52 chr5 17704194 17704556 -185380976 - MSTB1 LTR MaLR -57 375 1 2700 23 0 0 chr5 17704576 17704876 -185380656 + AluYb8 SINE Alu 1 300 -18 246 32 0 0 chr5 17704876 17704907 -185380625 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 21 36 0 0 chr5 17705013 17705041 -185380491 + AT_rich Low_complexity Low_complexity 1 28 0 2078 155 0 0 chr5 17708882 17709185 -185376347 + AluSx SINE Alu 1 303 -9 2074 84 77 0 chr5 17709495 17709781 -185375751 + AluY SINE Alu 1 308 -3 1738 157 43 6 chr5 17709805 17710156 -185375376 - Tigger1 DNA MER2_type 0 2418 2055 5421 58 29 7 chr5 17710161 17710920 -185374612 - L1PA6 LINE L1 0 6154 5379 507 272 136 17 chr5 17711218 17711519 -185374013 + MER46C DNA MER2_type 2 338 0 266 267 147 42 chr5 17711631 17711822 -185373710 - MIR SINE MIR -32 230 20 1945 211 25 25 chr5 17711937 17712453 -185373079 + Charlie1b DNA MER1_type 7 522 -1 743 270 109 0 chr5 17712453 17712664 -185372868 + MIR SINE MIR 8 241 -21 456 146 109 88 chr5 17713574 17713711 -185371821 + MIR SINE MIR 79 218 -44 807 244 218 36 chr5 17713797 17714296 -185371236 - MLT1G LTR MaLR 0 590 1 1989 117 39 0 chr5 17714462 17714745 -185370787 + AluSx SINE Alu 1 294 -18 364 266 16 14 chr5 17715123 17715260 -185370272 - MLT1J LTR MaLR -291 194 21 23 33 0 0 chr5 17715276 17715306 -185370226 + AT_rich Low_complexity Low_complexity 1 30 0 2125 104 0 0 chr5 17715870 17716138 -185369394 + AluSx SINE Alu 35 302 -10 231 197 171 13 chr5 17716173 17716249 -185369283 + MIR SINE MIR 82 169 -93 2494 75 0 0 chr5 17716548 17716853 -185368679 - AluY SINE Alu -6 305 1 463 90 0 0 chr5 17717018 17717085 -185368447 + L1MA2 LINE L1 6234 6300 -4 1799 164 3 10 chr5 17717732 17718030 -185367502 + AluJo SINE Alu 1 296 -16 193 248 227 43 chr5 17718769 17718910 -185366622 - MIR SINE MIR -18 244 78 293 259 137 33 chr5 17720480 17720692 -185364840 - MIR SINE MIR -28 234 1 395 63 16 0 chr5 17721536 17721599 -185363933 + (TA)n Simple_repeat Simple_repeat 2 65 0 1277 147 43 5 chr5 17721706 17721917 -185363615 + MER20 DNA MER1_type 1 219 0 2528 66 0 3 chr5 17722202 17722507 -185363025 + AluY SINE Alu 1 304 -7 763 224 36 18 chr5 17722644 17722863 -185362669 + MER58A DNA MER1_type 2 224 0 192 282 0 115 chr5 17722935 17723013 -185362519 + MER5A DNA MER1_type 1 69 -120 12329 107 17 19 chr5 17723941 17725837 -185359695 + HERVH LTR ERV1 641 2532 -5181 1050 169 0 0 chr5 17725829 17726007 -185359525 + HERVH LTR ERV1 2810 2987 -4726 * 914 130 20 0 chr5 17726001 17726147 -185359385 + HERVH LTR ERV1 3140 3288 -4425 * 3411 113 4 8 chr5 17726139 17726642 -185358890 + HERVH LTR ERV1 3492 3992 -3721 4502 135 0 3 chr5 17726645 17727306 -185358226 + HERVH LTR ERV1 4488 5146 -2567 1352 126 17 42 chr5 17727289 17727527 -185358005 + HERVH LTR ERV1 5588 5819 -1894 * 2397 96 53 13 chr5 17727525 17727902 -185357630 + HERVH LTR ERV1 7322 7713 0 2858 71 95 5 chr5 17727902 17728313 -185357219 + LTR7 LTR ERV1 1 448 -2 629 245 37 0 chr5 17729147 17729310 -185356222 - MIR SINE MIR -38 224 56 587 189 79 31 chr5 17730175 17730302 -185355230 + FLAM_A SINE Alu 1 133 0 252 0 0 0 chr5 17731023 17731051 -185354481 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 232 264 0 42 chr5 17731144 17731216 -185354316 - MIR SINE MIR -19 243 175 851 265 111 21 chr5 17731586 17731911 -185353621 + L1MC5 LINE L1 5537 5890 -1918 23 54 0 0 chr5 17732173 17732210 -185353322 + AT_rich Low_complexity Low_complexity 1 37 0 1555 171 30 23 chr5 17732220 17732519 -185353013 + AluJb SINE Alu 1 301 -11 1973 108 90 4 chr5 17732525 17732802 -185352730 + AluSx SINE Alu 1 301 -11 2133 172 6 6 chr5 17733133 17733494 -185352038 + MLT2D LTR ERVL 1 361 -53 294 148 0 0 chr5 17733495 17733549 -185351983 + (GA)n Simple_repeat Simple_repeat 2 55 0 265 93 70 0 chr5 17733549 17733592 -185351940 + MLT2D LTR ERVL 419 464 0 216 351 92 30 chr5 17733680 17733811 -185351721 + L2 LINE L2 3128 3266 -6 246 250 92 0 chr5 17735212 17735288 -185350244 + L1ME LINE L1 5590 5672 -449 * 354 231 137 53 chr5 17735281 17735580 -185349952 + L1MC5 LINE L1 6778 7101 -860 540 274 147 5 chr5 17735737 17735934 -185349598 + LTR16A LTR ERVL 212 436 -14 2671 275 83 40 chr5 17735950 17736693 -185348839 + HERV16 LTR ERVL 3 813 -4183 1107 229 5 0 chr5 17736693 17736911 -185348621 + MER58A DNA MER1_type 3 221 -3 2671 275 83 40 chr5 17736911 17737301 -185348231 + HERV16 LTR ERVL 813 1185 -3811 1833 148 63 27 chr5 17737302 17737634 -185347898 - MER2 DNA MER2_type 0 344 1 3323 155 55 0 chr5 17737636 17738177 -185347355 + Tigger7 DNA MER2_type 1 571 -162 676 123 9 44 chr5 17738171 17738285 -185347247 + Tigger7 DNA MER2_type 2382 2491 0 * 519 312 13 0 chr5 17738285 17738442 -185347090 + HERV16 LTR ERVL 1185 1343 -3653 455 325 21 11 chr5 17738507 17738698 -185346834 + HERV16 LTR ERVL 1375 1567 -3429 1471 304 73 21 chr5 17738715 17739413 -185346119 + HERV16 LTR ERVL 1705 2486 -2716 866 356 6 6 chr5 17739421 17739764 -185345768 + HERVL LTR ERVL 4198 4540 -1114 4648 122 87 65 chr5 17739838 17741276 -185344256 - pTR5 LTR ERV1 0 2438 66 1899 112 19 0 chr5 17741371 17741639 -185343893 + AluSx SINE Alu 1 273 -39 371 267 80 17 chr5 17741652 17741828 -185343704 + HERVL LTR ERVL 4785 4971 -793 704 286 41 15 chr5 17742394 17742660 -185342872 + LTR16A LTR ERVL 173 445 -5 1358 206 85 135 chr5 17743614 17743768 -185341764 - L1MC5 LINE L1 -36 7925 7765 408 55 0 0 chr5 17743768 17743823 -185341709 + (CA)n Simple_repeat Simple_repeat 1 55 0 1358 206 85 135 chr5 17743823 17744876 -185340656 - L1MC5 LINE L1 -196 7765 6778 248 232 101 0 chr5 17744869 17744938 -185340594 - L1ME LINE L1 -449 5672 5597 * 596 209 139 11 chr5 17746557 17746744 -185338788 - Charlie1a DNA MER1_type 0 1455 1245 973 189 51 108 chr5 17746745 17747079 -185338453 + L1MA7 LINE L1 5997 6311 -1 4033 196 21 33 chr5 17747265 17748201 -185337331 - Charlie1a DNA MER1_type -337 1118 194 1133 223 64 63 chr5 17748269 17748691 -185336841 - MER39 LTR ERV1 -88 619 9 622 246 11 44 chr5 17748718 17748901 -185336631 - Charlie1a DNA MER1_type -1275 180 4 280 119 0 2 chr5 17749022 17749072 -185336460 - L1ME LINE L1 -652 5522 5474 25 31 0 0 chr5 17749073 17749105 -185336427 + AT_rich Low_complexity Low_complexity 1 32 0 216 244 139 12 chr5 17750625 17750711 -185334821 + MIR SINE MIR 58 154 -108 202 284 12 37 chr5 17750787 17750868 -185334664 - L2 LINE L2 -86 3186 3108 411 21 0 0 chr5 17751162 17751210 -185334322 + (CA)n Simple_repeat Simple_repeat 1 48 0 1746 206 23 3 chr5 17751210 17751564 -185333968 + MLT1A1 LTR MaLR 2 362 -3 234 0 0 0 chr5 17751564 17751590 -185333942 + (CA)n Simple_repeat Simple_repeat 2 27 0 2155 119 3 6 chr5 17752049 17752360 -185333172 + AluSx SINE Alu 2 311 -1 210 37 0 0 chr5 17754907 17754934 -185330598 + (TG)n Simple_repeat Simple_repeat 1 27 0 273 301 24 0 chr5 17755527 17755610 -185329922 - L2 LINE L2 -4 3309 3225 2258 109 3 10 chr5 17755615 17755926 -185329606 + AluSx SINE Alu 1 309 -3 212 266 0 0 chr5 17755969 17756033 -185329499 - L2 LINE L2 -83 3230 3167 797 294 12 8 chr5 17756054 17756299 -185329233 + MIR SINE MIR 8 253 -9 300 298 105 5 chr5 17756316 17756648 -185328884 - L2 LINE L2 -167 3146 2781 498 271 54 12 chr5 17757418 17757584 -185327948 - MER5B DNA MER1_type 0 178 6 481 202 101 17 chr5 17757909 17758028 -185327504 - L2 LINE L2 -3 3310 3182 798 259 79 40 chr5 17758137 17758558 -185326974 + LTR33 LTR ERVL 49 518 -3 285 276 0 0 chr5 17759419 17759477 -185326055 - MER81 DNA DNA -2 112 55 206 247 236 0 chr5 17760156 17760245 -185325287 - MER5B DNA MER1_type -7 171 62 1113 64 0 14 chr5 17760274 17760415 -185325117 - Alu SINE Alu -7 304 166 220 236 69 0 chr5 17760544 17760616 -185324916 - MIR3 SINE MIR -19 189 113 182 150 25 0 chr5 17761252 17761292 -185324240 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 348 127 0 0 chr5 17761807 17761862 -185323670 + (TA)n Simple_repeat Simple_repeat 1 55 0 261 152 0 0 chr5 17761864 17761910 -185323622 - LTR66 LTR ERVL -171 439 394 367 242 0 22 chr5 17762822 17762913 -185322619 - L2 LINE L2 -6 3266 3178 462 311 8 0 chr5 17762982 17763114 -185322418 - L2 LINE L2 -252 3061 2929 2531 261 211 29 chr5 17763891 17764125 -185321407 + L2 LINE L2 601 791 -2523 2334 113 0 0 chr5 17764125 17764425 -185321107 - AluSx SINE Alu -12 300 1 2531 261 211 29 chr5 17764425 17765566 -185319966 + L2 LINE L2 791 2208 -1106 1028 132 19 6 chr5 17765671 17765830 -185319702 - AluJb SINE Alu -151 161 1 2292 180 92 29 chr5 17765831 17766436 -185319096 + L1MCa LINE L1 1926 2608 -3999 1777 177 14 3 chr5 17766436 17766730 -185318802 + AluJb SINE Alu 1 297 -15 2292 180 92 29 chr5 17766730 17766850 -185318682 + L1MCa LINE L1 2608 2719 -3888 653 117 48 19 chr5 17766852 17766955 -185318577 + AluSx SINE Alu 3 108 -205 471 70 0 0 chr5 17766980 17767051 -185318481 + L1MC1 LINE L1 1926 1996 -4430 1476 116 14 0 chr5 17767051 17767258 -185318274 + AluSx SINE Alu 86 295 -15 7766 203 86 18 chr5 17767258 17769145 -185316387 + L1MC1 LINE L1 2672 4429 -2184 1091 214 78 42 chr5 17769145 17769477 -185316055 + MER2 DNA MER2_type 1 344 0 7766 203 86 18 chr5 17769477 17771252 -185314280 + L1MC1 LINE L1 4429 6600 -13 22 35 0 0 chr5 17771252 17771281 -185314251 + AT_rich Low_complexity Low_complexity 1 29 0 1013 188 79 4 chr5 17771287 17771553 -185313979 - Charlie4a DNA MER1_type -153 355 70 41126 33 21 1 chr5 17771565 17777595 -185307937 + L1PA2 LINE L1 2 6155 0 272 221 44 0 chr5 17777600 17777668 -185307864 - Charlie4a DNA MER1_type -421 87 17 1745 178 45 31 chr5 17777896 17778255 -185307277 + MLT1A1 LTR MaLR 1 364 -1 263 234 32 32 chr5 17778661 17778755 -185306777 + MLT1I LTR MaLR 291 384 -25 1195 200 39 60 chr5 17779077 17779446 -185306086 + MLT1A2 LTR MaLR 11 374 0 550 303 144 5 chr5 17779675 17779870 -185305662 - MIR SINE MIR -25 237 16 2070 82 3 55 chr5 17780040 17780370 -185305162 - L1PA13 LINE L1 -2 6161 5849 256 139 292 14 chr5 17780451 17780523 -185305009 + MER39 LTR ERV1 1 92 -615 478 165 91 0 chr5 17780533 17780654 -185304878 + LTR48 LTR ERV1 177 308 -479 516 234 98 61 chr5 17780663 17780997 -185304535 + LTR48 LTR ERV1 238 774 0 531 298 88 0 chr5 17781077 17781292 -185304240 - L2 LINE L2 0 3313 3080 3939 148 21 27 chr5 17781486 17782201 -185303331 - MER50 LTR ERV1 -23 711 1 1162 214 132 82 chr5 17782641 17782973 -185302559 + MLT1E2 LTR MaLR 111 477 -149 2351 99 3 0 chr5 17782973 17783285 -185302247 - AluSp SINE Alu 0 313 1 1162 214 132 82 chr5 17783285 17783443 -185302089 + MLT1E2 LTR MaLR 477 626 0 315 49 0 0 chr5 17784237 17784278 -185301254 + (TTAGGG)n Simple_repeat Simple_repeat 3 43 0 1561 177 9 47 chr5 17784490 17784807 -185300725 + AluJo SINE Alu 1 305 -7 202 234 21 0 chr5 17785115 17785162 -185300370 - L2 LINE L2 -8 3264 3217 22 0 0 0 chr5 17785554 17785576 -185299956 + AT_rich Low_complexity Low_complexity 1 22 0 296 260 10 50 chr5 17785587 17785687 -185299845 - L1MEd LINE L1 -5585 534 439 21 0 0 0 chr5 17785837 17785858 -185299674 + AT_rich Low_complexity Low_complexity 1 21 0 863 233 91 24 chr5 17786022 17786352 -185299180 - MER34 LTR ERV1 -45 520 146 240 174 33 76 chr5 17786362 17786454 -185299078 - MER65A LTR ERV1 -2 443 356 347 252 38 15 chr5 17786630 17786761 -185298771 - MER65A LTR ERV1 -311 134 1 445 236 18 9 chr5 17786779 17786889 -185298643 - MER34 LTR ERV1 -431 111 1 1269 226 53 55 chr5 17786924 17787358 -185298174 - LTR47B LTR ERVL 0 443 11 270 0 0 0 chr5 17787369 17787399 -185298133 + (CA)n Simple_repeat Simple_repeat 2 31 0 198 167 0 0 chr5 17787790 17787826 -185297706 + (CA)n Simple_repeat Simple_repeat 1 36 0 2287 89 0 19 chr5 17788079 17788392 -185297140 + AluSx SINE Alu 1 307 -5 260 270 27 14 chr5 17788392 17788466 -185297066 + MER21B LTR ERV1 16 90 -773 468 271 28 40 chr5 17788519 17788696 -185296836 + MER21B LTR ERV1 98 272 -591 5853 144 16 8 chr5 17788699 17789823 -185295709 + L1P LINE L1 4293 5418 -750 4824 132 40 2 chr5 17789938 17790739 -185294793 - Tigger1 DNA MER2_type -1585 833 3 259 219 14 0 chr5 17790741 17790814 -185294718 - MER82 DNA MER2_type -453 200 127 2320 146 24 19 chr5 17790875 17791300 -185294232 - MSTA LTR MaLR 0 428 2 512 275 69 48 chr5 17791328 17791703 -185293829 - L1ME LINE L1 -471 5691 5309 390 291 106 20 chr5 17791908 17792162 -185293370 - L1ME LINE L1 -966 5180 4905 358 207 193 0 chr5 17792177 17792317 -185293215 - L1ME LINE L1 -1497 4649 4483 22 0 0 0 chr5 17792409 17792431 -185293101 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 17792468 17792511 -185293021 + AT_rich Low_complexity Low_complexity 1 43 0 226 263 68 17 chr5 17792521 17792639 -185292893 - L1ME LINE L1 -1954 4192 4069 2120 164 53 10 chr5 17794144 17794541 -185290991 - MLT2D LTR ERVL 0 414 1 628 76 0 0 chr5 17794542 17794634 -185290898 + L1PB1 LINE L1 6060 6151 0 2409 71 0 14 chr5 17795207 17795504 -185290028 - AluY SINE Alu -18 293 1 2245 125 0 0 chr5 17795598 17795903 -185289629 - AluSx SINE Alu -7 305 1 217 233 0 0 chr5 17796316 17796359 -185289173 - L2 LINE L2 -2 3311 3269 1063 199 130 51 chr5 17797703 17798034 -185287498 + MLT1A1 LTR MaLR 1 357 -8 433 246 25 34 chr5 17798164 17798310 -185287222 + MIR SINE MIR 27 172 -63 235 274 17 120 chr5 17798513 17798630 -185286902 + MER5B DNA MER1_type 6 110 -68 251 91 0 23 chr5 17799483 17799527 -185286005 + (CA)n Simple_repeat Simple_repeat 2 44 0 183 156 0 0 chr5 17799529 17799561 -185285971 + (TG)n Simple_repeat Simple_repeat 1 32 0 254 335 164 7 chr5 17799756 17799908 -185285624 - MLT1L LTR MaLR -88 527 352 635 249 46 20 chr5 17800502 17800699 -185284833 - MLT1A2 LTR MaLR -16 358 157 586 193 8 0 chr5 17800791 17800910 -185284622 + MER96B DNA MER1_type? 298 417 0 21 71 0 0 chr5 17800978 17801020 -185284512 + AT_rich Low_complexity Low_complexity 1 42 0 302 320 33 53 chr5 17802109 17802259 -185283273 + MIR3 SINE MIR 30 176 -32 1441 224 58 18 chr5 17802545 17803089 -185282443 - MER90 LTR ERV1 0 614 10 733 165 256 6 chr5 17803927 17804091 -185281441 - MER7A DNA MER2_type -143 203 1 960 187 74 37 chr5 17804097 17804396 -185281136 + L1MC5 LINE L1 7601 7910 -51 2149 98 39 0 chr5 17804398 17804683 -185280849 + AluSq SINE Alu 1 296 -17 23 0 0 0 chr5 17804693 17804716 -185280816 + AT_rich Low_complexity Low_complexity 1 23 0 269 305 153 3 chr5 17805026 17805205 -185280327 + MIR SINE MIR 4 262 0 1834 204 22 53 chr5 17805306 17805811 -185279721 - MER65B LTR ERV1 -42 489 1 2150 152 33 35 chr5 17805814 17806243 -185279289 - Tigger2a DNA MER2_type 0 434 7 313 309 72 15 chr5 17806843 17807036 -185278496 - MIR SINE MIR 0 208 5 288 130 0 0 chr5 17807108 17807154 -185278378 + (GA)n Simple_repeat Simple_repeat 1 46 0 25 95 0 0 chr5 17807221 17807295 -185278237 + AT_rich Low_complexity Low_complexity 1 74 0 2441 58 0 35 chr5 17807375 17807685 -185277847 - AluY SINE Alu -12 299 1 2674 76 103 5 chr5 17807872 17808280 -185277252 + LTR7 LTR ERV1 1 448 -2 3857 81 12 7 chr5 17808282 17808864 -185276668 + HERVH LTR ERV1 1 585 -7128 919 153 71 53 chr5 17810162 17810332 -185275200 - AluJb SINE Alu -7 305 133 259 222 181 0 chr5 17811820 17811892 -185273640 + MIR SINE MIR 63 147 -115 606 192 46 91 chr5 17813016 17813235 -185272297 + MER3 DNA MER1_type 1 209 0 1790 239 82 23 chr5 17813321 17814063 -185271469 + L1ME3A LINE L1 5285 6122 -48 1622 151 80 19 chr5 17814063 17814387 -185271145 + MER2 DNA MER2_type 1 344 0 1790 239 82 23 chr5 17814387 17814434 -185271098 + L1ME3A LINE L1 6122 6165 -5 279 233 41 41 chr5 17814501 17814574 -185270958 + MIR SINE MIR 184 256 -6 672 212 0 29 chr5 17814632 17814769 -185270763 - FLAM_A SINE Alu 0 133 1 2200 275 113 20 chr5 17814962 17815989 -185269543 - L2 LINE L2 -70 3243 2119 1627 183 39 3 chr5 17816446 17816731 -185268801 + AluJb SINE Alu 1 295 -17 1619 188 58 50 chr5 17818210 17818571 -185266961 + MLT1A1 LTR MaLR 2 365 0 269 245 53 21 chr5 17818851 17818945 -185266587 - L2 LINE L2 -4 3309 3213 933 215 88 8 chr5 17820432 17820683 -185264849 - MER33 DNA MER1_type -13 311 41 2277 84 0 7 chr5 17820738 17821037 -185264495 + AluSx SINE Alu 1 297 -15 305 300 114 64 chr5 17821177 17821521 -185264011 + L2 LINE L2 2736 3102 -211 1471 215 217 25 chr5 17821531 17821968 -185263564 - MLT1F LTR MaLR 0 542 22 435 228 0 0 chr5 17822025 17822104 -185263428 - MER81 DNA DNA -34 80 2 279 224 214 10 chr5 17822128 17822226 -185263306 + L2 LINE L2 3192 3309 -4 216 0 0 0 chr5 17822907 17822931 -185262601 + (T)n Simple_repeat Simple_repeat 1 24 0 2387 142 83 0 chr5 17823575 17823970 -185261562 + MSTA LTR MaLR 1 428 0 257 251 133 94 chr5 17824693 17824844 -185260688 + MIR SINE MIR 3 160 -48 1705 199 53 3 chr5 17824865 17825187 -185260345 - MER58B DNA MER1_type 0 341 4 395 328 23 0 chr5 17825192 17825323 -185260209 - MIR SINE MIR -66 196 63 216 135 0 0 chr5 17828759 17828796 -185256736 + (T)n Simple_repeat Simple_repeat 1 37 0 250 306 20 10 chr5 17934378 17934476 -185151056 + MIR SINE MIR 45 143 -119 237 257 56 69 chr5 17935906 17936050 -185149482 - L1ME3 LINE L1 -66 6096 5955 2278 163 60 8 chr5 17936051 17936451 -185149081 + MSTB LTR MaLR 1 421 -5 538 262 74 37 chr5 17936528 17936570 -185148962 - L1ME3 LINE L1 -222 5948 5909 2187 143 37 8 chr5 17936570 17936921 -185148611 + MER46B DNA MER2_type 1 236 0 538 262 74 37 chr5 17936921 17937122 -185148410 - L1ME3 LINE L1 -261 5909 5696 339 282 28 7 chr5 17937389 17937531 -185148001 + (CCA)n Simple_repeat Simple_repeat 1 145 0 365 303 148 27 chr5 17941864 17942230 -185143302 + MLT1J LTR MaLR 87 496 -15 234 248 139 20 chr5 17942427 17942528 -185143004 - L2 LINE L2 -15 3257 3145 2359 112 0 0 chr5 17943233 17943545 -185141987 + AluSx SINE Alu 1 312 0 26 50 0 0 chr5 17943545 17943585 -185141947 + AT_rich Low_complexity Low_complexity 1 40 0 2298 60 0 3 chr5 17943937 17944219 -185141313 - AluY SINE Alu -8 303 23 23 0 0 0 chr5 17945139 17945162 -185140370 + AT_rich Low_complexity Low_complexity 1 23 0 247 231 48 115 chr5 17946333 17946437 -185139095 + L2 LINE L2 3164 3260 -12 6965 51 15 12 chr5 17946619 17946933 -185138599 - L1PA7 LINE L1 -20 6134 5822 2426 78 3 7 chr5 17946933 17947240 -185138292 - AluY SINE Alu -5 306 1 6965 51 15 12 chr5 17947240 17947889 -185137643 - L1PA7 LINE L1 -332 5822 5171 671 177 194 16 chr5 17951606 17951792 -185133740 - MER20 DNA MER1_type 0 219 1 365 285 117 46 chr5 17953667 17954018 -185131514 + L2 LINE L2 2856 3231 -82 314 294 65 33 chr5 17954428 17954612 -185130920 - L1MC4a LINE L1 -1838 5970 5781 488 260 96 14 chr5 17954890 17955109 -185130423 - L1ME3 LINE L1 -2302 5506 5270 291 361 17 0 chr5 17955783 17955902 -185129630 - MER5A DNA MER1_type 0 189 69 729 137 29 79 chr5 17956785 17956924 -185128608 - AluJo SINE Alu -140 172 41 568 217 38 0 chr5 17956929 17957035 -185128497 + FRAM SINE Alu 37 146 -30 183 42 0 0 chr5 17957037 17957061 -185128471 + (CA)n Simple_repeat Simple_repeat 2 25 0 252 174 0 45 chr5 17957082 17957138 -185128394 + Alu SINE Alu 245 283 -19 245 225 0 10 chr5 17957182 17957238 -185128294 + FAM SINE Alu 107 158 -17 408 276 74 28 chr5 17957755 17957972 -185127560 + MARNA DNA Mariner 178 404 -182 1971 62 39 0 chr5 17959124 17959381 -185126151 - L1P3 LINE L1 -350 5804 5538 343 252 0 41 chr5 17959629 17959752 -185125780 + G-rich Low_complexity Low_complexity 3 120 0 2350 116 0 0 chr5 17961144 17961455 -185124077 + AluSq SINE Alu 1 311 -2 2251 112 0 13 chr5 17962454 17962767 -185122765 + AluSx SINE Alu 1 309 -3 380 269 111 50 chr5 17963230 17963509 -185122023 + L1MC5 LINE L1 5635 5930 -1878 183 379 29 0 chr5 17963872 17963975 -185121557 + L2 LINE L2 2491 2596 -718 214 175 105 18 chr5 17965017 17965074 -185120458 + MIR SINE MIR 72 133 -129 241 264 132 33 chr5 17965941 17966062 -185119470 + MLT1F1 LTR MaLR 188 320 -247 241 252 78 43 chr5 17966055 17966170 -185119362 + MLT1E LTR MaLR 384 502 -91 * 289 267 38 61 chr5 17966165 17966296 -185119236 - MER58B DNA MER1_type -17 324 197 672 268 0 0 chr5 17966514 17966671 -185118861 - L1MC5 LINE L1 -1169 6792 6636 2133 148 16 47 chr5 17966752 17967138 -185118394 + THE1C LTR MaLR 1 374 -1 873 215 125 81 chr5 17967140 17967549 -185117983 + L1MC5 LINE L1 6807 7233 -728 207 0 0 0 chr5 17967727 17967750 -185117782 + (TC)n Simple_repeat Simple_repeat 1 23 0 656 235 163 45 chr5 17967798 17968062 -185117470 + L1MC5 LINE L1 7308 7540 -421 1952 161 0 3 chr5 17968062 17968361 -185117171 + AluJo SINE Alu 1 298 -14 656 235 163 45 chr5 17968361 17968649 -185116883 + L1MC5 LINE L1 7540 7925 -36 1573 162 96 35 chr5 17968723 17969068 -185116464 - MER47A DNA MER2_type 0 366 1 922 143 0 43 chr5 17969735 17969896 -185115636 + FRAM SINE Alu 22 175 -1 401 238 67 72 chr5 17973968 17974191 -185111341 + MLT1J LTR MaLR 97 318 -193 243 254 0 0 chr5 17976384 17976439 -185109093 + L1MB7 LINE L1 6120 6174 -10 234 182 0 0 chr5 17976463 17976507 -185109025 + L1MC3 LINE L1 6885 6928 -857 2177 121 7 3 chr5 17976703 17977001 -185108531 + AluSx SINE Alu 1 299 -13 2050 122 14 0 chr5 17977888 17978167 -185107365 - AluSq SINE Alu -30 283 1 28 29 0 0 chr5 17978751 17978786 -185106746 + AT_rich Low_complexity Low_complexity 1 35 0 200 267 6 19 chr5 17979912 17980073 -185105459 + GA-rich Low_complexity Low_complexity 1 159 0 21 0 0 0 chr5 17981387 17981408 -185104124 + AT_rich Low_complexity Low_complexity 1 21 0 204 150 50 0 chr5 17981460 17981500 -185104032 + GA-rich Low_complexity Low_complexity 5 46 0 324 221 32 32 chr5 17982884 17982902 -185102630 - L1MA10 LINE L1 -2 6332 6315 2560 235 75 19 chr5 17982902 17983668 -185101864 - L1ME2 LINE L1 -9 6155 5356 245 298 12 12 chr5 17984042 17984126 -185101406 - MIR3 SINE MIR -33 175 92 226 294 87 76 chr5 17984400 17984584 -185100948 + MIR SINE MIR 6 191 -71 506 310 51 0 chr5 17986279 17986437 -185099095 + MIR SINE MIR 11 176 -86 2058 103 45 7 chr5 17986440 17986732 -185098800 + AluSx SINE Alu 1 303 -9 1916 153 0 54 chr5 17988850 17989183 -185096349 + MER1B DNA MER1_type 1 315 -24 2413 114 11 3 chr5 17989922 17990282 -185095250 + L1PA15 LINE L1 5799 6161 -4 419 311 0 22 chr5 17990677 17990860 -185094672 + (CA)n Simple_repeat Simple_repeat 1 179 0 368 333 6 17 chr5 17990886 17991066 -185094466 + (CA)n Simple_repeat Simple_repeat 1 178 0 355 331 0 22 chr5 17991164 17991345 -185094187 + (CA)n Simple_repeat Simple_repeat 2 178 0 205 387 6 12 chr5 17991359 17991527 -185094005 + (CATA)n Simple_repeat Simple_repeat 4 170 0 210 237 34 51 chr5 17993230 17993289 -185092243 - L3 LINE CR1 -1075 502 445 1933 119 78 0 chr5 17994163 17994432 -185091100 + AluSx SINE Alu 1 290 -22 195 212 136 45 chr5 17995489 17995555 -185089977 - MIR SINE MIR -111 151 80 3404 192 30 66 chr5 17996081 17996954 -185088578 + L1MD2 LINE L1 5505 6345 -14 284 222 19 0 chr5 17997008 17997062 -185088470 + Tigger5 DNA MER2_type 1 55 -2268 * 300 156 26 91 chr5 17997033 17997110 -185088422 + Tigger5 DNA MER2_type 2252 2323 0 249 400 39 0 chr5 17998466 17998596 -185086936 - L2 LINE L2 -2 3270 3136 2541 65 0 10 chr5 17999582 17999891 -185085641 - AluY SINE Alu -5 306 1 1120 137 22 22 chr5 18000752 18000934 -185084598 - AluJb SINE Alu -15 297 116 1090 143 22 22 chr5 18001295 18001477 -185084055 - AluJb SINE Alu -15 297 116 193 373 0 0 chr5 18002283 18002358 -185083174 - L2 LINE L2 -562 2752 2678 21 0 0 0 chr5 18003167 18003188 -185082344 + AT_rich Low_complexity Low_complexity 1 21 0 1842 159 6 25 chr5 18004549 18004863 -185080669 - AluJo SINE Alu -4 308 1 592 261 5 59 chr5 18005317 18005503 -185080029 + L1MC4 LINE L1 6457 6633 -1409 180 0 0 0 chr5 18005503 18005523 -185080009 + (CA)n Simple_repeat Simple_repeat 2 21 0 592 261 5 59 chr5 18005523 18005539 -185079993 + L1MC4 LINE L1 6633 6648 -1394 363 222 94 17 chr5 18006374 18006491 -185079041 - MIR SINE MIR -80 182 57 291 280 200 7 chr5 18007678 18007828 -185077704 - MIR SINE MIR -21 241 63 265 293 28 0 chr5 18009109 18009204 -185076328 - MIR SINE MIR -63 145 76 309 215 77 0 chr5 18010494 18010559 -185074973 + Tigger2 DNA MER2_type 2 71 -2647 245 224 103 0 chr5 18010563 18010621 -185074911 - MER2 DNA MER2_type 0 345 282 * 352 246 0 0 chr5 18010598 18010663 -185074869 - MER8 DNA MER2_type -62 177 113 1586 182 75 3 chr5 18010925 18011260 -185074272 - MLT1A1 LTR MaLR -2 363 5 259 282 0 0 chr5 18011747 18011825 -185073707 + MIR SINE MIR 78 155 -107 25 0 0 0 chr5 18012863 18012888 -185072644 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 18013052 18013074 -185072458 + AT_rich Low_complexity Low_complexity 1 22 0 2351 106 3 0 chr5 18013080 18013392 -185072140 + AluSq SINE Alu 1 313 0 23 0 0 0 chr5 18013596 18013619 -185071913 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr5 18014867 18014890 -185070642 + (TC)n Simple_repeat Simple_repeat 2 24 0 2294 145 51 12 chr5 18014890 18015303 -185070229 + MSTB1 LTR MaLR 2 430 -2 638 260 92 36 chr5 18015545 18015795 -185069737 + MER46C DNA MER2_type 36 299 -39 182 222 185 0 chr5 18015830 18015884 -185069648 - MIR SINE MIR -109 153 90 184 345 0 0 chr5 18017230 18017285 -185068247 + MIR SINE MIR 97 151 -57 2743 107 0 0 chr5 18018493 18018857 -185066675 - THE1B LTR MaLR 0 364 1 189 307 46 46 chr5 18019184 18019402 -185066130 + L2 LINE L2 2834 3051 -221 21 36 0 0 chr5 18019935 18019963 -185065569 + AT_rich Low_complexity Low_complexity 1 28 0 1275 175 6 86 chr5 18022072 18022397 -185063135 - AluSx SINE Alu -13 299 1 2256 107 0 3 chr5 18022399 18022699 -185062833 - AluSx SINE Alu -13 299 1 1008 105 8 0 chr5 18022701 18022834 -185062698 - AluSq/x SINE Alu -179 134 1 232 250 15 15 chr5 18024119 18024187 -185061345 + (CA)n Simple_repeat Simple_repeat 1 68 0 22 35 0 0 chr5 18024405 18024434 -185061098 + AT_rich Low_complexity Low_complexity 1 29 0 2422 63 0 10 chr5 18024993 18025292 -185060240 + AluSc SINE Alu 1 296 -13 1123 296 54 22 chr5 18025910 18026414 -185059118 + MER20B DNA MER1_type 264 783 0 634 283 91 71 chr5 18026538 18026991 -185058541 + MLT1J LTR MaLR 1 462 -49 2141 116 0 10 chr5 18029558 18029852 -185055680 + AluSx SINE Alu 1 291 -21 319 269 9 19 chr5 18030644 18030752 -185054780 + A-rich Low_complexity Low_complexity 3 109 0 199 273 0 0 chr5 18030785 18030829 -185054703 + L2 LINE L2 3207 3250 -22 599 244 80 24 chr5 18031243 18031456 -185054076 + L1MC4 LINE L1 6463 6687 -1355 349 251 6 12 chr5 18031456 18031619 -185053913 + (TGGG)n Simple_repeat Simple_repeat 2 163 0 820 222 26 6 chr5 18031622 18031940 -185053592 + (TGGA)n Simple_repeat Simple_repeat 1 324 0 601 198 6 16 chr5 18031962 18032144 -185053388 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 693 278 48 39 chr5 18032265 18032710 -185052822 + L1MC4 LINE L1 7386 7808 0 1958 184 36 0 chr5 18033677 18034013 -185051519 - MER7A DNA MER2_type 0 346 1 184 274 39 0 chr5 18034212 18034263 -185051269 - L2 LINE L2 -15 3298 3246 357 250 223 6 chr5 18034521 18034720 -185050812 + MIR SINE MIR 2 230 -32 284 264 66 28 chr5 18035496 18035602 -185049930 - MER5A DNA MER1_type -57 132 23 299 218 85 128 chr5 18039314 18039502 -185046030 + MER3 DNA MER1_type 30 209 0 22 0 0 0 chr5 18040618 18040640 -185044892 + AT_rich Low_complexity Low_complexity 1 22 0 605 261 113 15 chr5 18042219 18042422 -185043110 - MIR SINE MIR -12 250 28 674 283 143 0 chr5 18044955 18045178 -185040354 - MIR SINE MIR -2 260 6 1395 130 4 48 chr5 18045594 18045824 -185039708 - AluJo SINE Alu -9 303 84 235 307 160 20 chr5 18046956 18047106 -185038426 - MIR3 SINE MIR -21 187 17 2463 74 0 0 chr5 18047984 18048280 -185037252 - AluSx SINE Alu -2 310 15 24 0 0 29 chr5 18049924 18049943 -185035589 + AT_rich Low_complexity Low_complexity 1 20 -14 2150 116 3 7 chr5 18049943 18050235 -185035297 - AluSx SINE Alu -21 291 1 24 0 0 29 chr5 18050235 18050250 -185035282 + AT_rich Low_complexity Low_complexity 20 34 0 1105 187 53 78 chr5 18050258 18050395 -185035137 - AluJo SINE Alu -35 277 149 2209 103 10 0 chr5 18050395 18050695 -185034837 - AluSq SINE Alu -10 303 1 1105 187 53 78 chr5 18050695 18050841 -185034691 - AluJo SINE Alu -163 149 1 2476 61 3 0 chr5 18051121 18051414 -185034118 - AluY SINE Alu -17 294 1 285 225 167 51 chr5 18053583 18053721 -185031811 + Charlie1 DNA MER1_type 1419 1572 -1189 198 0 0 0 chr5 18056015 18056037 -185029495 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 271 307 109 0 chr5 18056264 18056401 -185029131 - MIR SINE MIR -27 235 84 612 217 76 14 chr5 18057032 18057239 -185028293 + L1MD3 LINE L1 7720 7993 -2 2000 135 151 39 chr5 18058266 18058651 -185026881 + MSTA LTR MaLR 1 428 0 238 314 85 8 chr5 18060710 18060828 -185024704 - MIR SINE MIR -36 226 100 189 0 0 0 chr5 18062450 18062471 -185023061 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 416 262 35 28 chr5 18062526 18062667 -185022865 + L2 LINE L2 3099 3240 -73 219 186 0 0 chr5 18063787 18063830 -185021702 + (TA)n Simple_repeat Simple_repeat 1 43 0 235 125 54 0 chr5 18063831 18063887 -185021645 - L1MCa LINE L1 -4362 2064 2006 251 140 20 0 chr5 18063892 18063942 -185021590 + (TA)n Simple_repeat Simple_repeat 2 52 0 383 319 49 45 chr5 18063996 18064262 -185021270 + L1MC4a LINE L1 5786 6052 -1756 2512 241 143 51 chr5 18064645 18065950 -185019582 + L1MC5 LINE L1 6512 7925 -36 708 182 171 9 chr5 18066111 18066319 -185019213 - MLT1A1 LTR MaLR -125 249 1 813 176 149 0 chr5 18066668 18066856 -185018676 + L1MB7 LINE L1 5953 6168 -16 307 239 145 8 chr5 18070124 18070241 -185015291 + L1ME LINE L1 85 217 -5853 477 223 10 114 chr5 18070286 18070479 -185015053 + L1ME LINE L1 438 610 -5460 260 303 53 0 chr5 18073450 18073526 -185012006 + L2 LINE L2 3223 3302 -11 1451 158 19 15 chr5 18073550 18073816 -185011716 + AluSx SINE Alu 41 307 -5 192 135 0 0 chr5 18073817 18073854 -185011678 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 21 82 0 0 chr5 18074414 18074463 -185011069 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 18075331 18075359 -185010173 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 18075683 18075718 -185009814 + AT_rich Low_complexity Low_complexity 1 35 0 212 260 0 0 chr5 18076092 18076142 -185009390 + (CATA)n Simple_repeat Simple_repeat 3 52 0 1510 214 14 103 chr5 18085937 18086530 -184999002 + L1ME LINE L1 2248 2787 -3293 649 178 78 0 chr5 18089339 18089468 -184996064 - FLAM_A SINE Alu -3 139 1 283 308 22 22 chr5 18089521 18089612 -184995920 + L2 LINE L2 3198 3288 -25 998 192 9 57 chr5 18089806 18090035 -184995497 - MER20 DNA MER1_type 0 219 2 1228 182 40 121 chr5 18090302 18090698 -184994834 + MLT1A1 LTR MaLR 1 364 -1 393 212 25 76 chr5 18092632 18092750 -184992782 + MIR3 SINE MIR 66 177 -31 207 0 0 0 chr5 18094380 18094403 -184991129 + (TA)n Simple_repeat Simple_repeat 1 23 0 5202 94 42 7 chr5 18094965 18095697 -184989835 - L1PA7 LINE L1 -13 6141 5384 1301 67 0 0 chr5 18095700 18095864 -184989668 - L1PA4 LINE L1 -3 6152 5989 2009 121 10 0 chr5 18098664 18098961 -184986571 - AluSx SINE Alu -12 300 1 242 306 22 72 chr5 18098962 18099142 -184986390 + MIR3 SINE MIR 36 206 -2 2065 157 48 45 chr5 18100424 18100865 -184984667 - MER65A LTR ERV1 0 445 4 708 218 0 0 chr5 18101335 18101468 -184984064 + FLAM_A SINE Alu 1 133 0 280 250 33 94 chr5 18101767 18101947 -184983585 - L2 LINE L2 0 3313 3145 2298 81 3 0 chr5 18103177 18103484 -184982048 - AluSx SINE Alu -4 308 1 253 351 36 56 chr5 18103768 18104019 -184981513 + L2 LINE L2 2838 3083 -189 426 286 140 12 chr5 18104920 18105091 -184980441 + MIR3 SINE MIR 16 208 0 474 242 11 0 chr5 18105097 18105192 -184980340 + MIR SINE MIR 81 176 -86 545 132 28 0 chr5 18105251 18105357 -184980175 - L1MA8 LINE L1 0 6291 6183 2583 178 36 4 chr5 18105374 18105869 -184979663 - L1MB5 LINE L1 -8 6166 5656 2524 159 28 30 chr5 18107513 18107986 -184977546 + MER70A LTR ERVL 1 472 0 3077 191 46 3 chr5 18107986 18109059 -184976473 + MER70A-int LTR ERVL 1 1191 -3832 1864 186 40 40 chr5 18109080 18109505 -184976027 + MER70A-int LTR ERVL 2387 2811 -2212 * 5461 164 31 41 chr5 18109490 18110222 -184975310 + MER70A-int LTR ERVL 2947 3685 -1338 1996 174 88 8 chr5 18110222 18110618 -184974914 + MSTA LTR MaLR 1 428 0 5461 164 31 41 chr5 18110618 18110820 -184974712 + MER70A-int LTR ERVL 3685 3888 -1135 2173 119 3 0 chr5 18110820 18111131 -184974401 - AluSx SINE Alu 0 312 1 5461 164 31 41 chr5 18111131 18111587 -184973945 + MER70A-int LTR ERVL 3888 4347 -676 963 51 7 15 chr5 18111587 18111724 -184973808 - L1PA4 LINE L1 0 6155 6020 5461 164 31 41 chr5 18111724 18112195 -184973337 + MER70A-int LTR ERVL 4347 4882 -141 2208 209 15 0 chr5 18112195 18112607 -184972925 + MER70A LTR ERVL 55 472 0 2060 92 3 38 chr5 18113053 18113369 -184972163 + AluSp SINE Alu 3 307 -6 217 253 76 38 chr5 18113784 18113863 -184971669 + L2 LINE L2 2412 2493 -821 21 0 0 0 chr5 18118475 18118496 -184967036 + AT_rich Low_complexity Low_complexity 1 21 0 1887 125 17 0 chr5 18118937 18119269 -184966263 - AluSx SINE Alu 0 337 1 1845 181 65 11 chr5 18119952 18120322 -184965210 - MLT1B LTR MaLR 0 390 1 311 297 183 15 chr5 18120380 18120582 -184964950 - MIR SINE MIR -25 237 2 354 281 53 18 chr5 18120618 18120732 -184964800 - MIR3 SINE MIR -77 131 14 21 0 0 0 chr5 18122742 18122763 -184962769 + AT_rich Low_complexity Low_complexity 1 21 0 3788 226 92 29 chr5 18122765 18122992 -184962540 - L1MC4a LINE L1 -5 7803 7592 516 118 53 0 chr5 18122992 18123068 -184962464 + MADE1 DNA Mariner 1 80 0 3788 226 92 29 chr5 18123068 18123347 -184962185 - L1MC4a LINE L1 -216 7592 7332 1676 164 80 22 chr5 18123347 18123671 -184961861 - MER61A LTR ERV1 0 343 1 3788 226 92 29 chr5 18123671 18124266 -184961266 - L1MC4a LINE L1 -476 7332 6631 2118 114 93 32 chr5 18124355 18124698 -184960834 - THE1B LTR MaLR 0 364 1 4204 80 25 6 chr5 18124698 18125248 -184960284 - THE1B-int LTR MaLR 0 1580 1020 694 202 87 149 chr5 18125275 18125690 -184959842 - L1MC4a LINE L1 -1226 6582 6194 1532 190 104 20 chr5 18125729 18126076 -184959456 - MLT1B LTR MaLR -12 378 3 2223 123 20 0 chr5 18127268 18127569 -184957963 - AluSg SINE Alu -3 307 1 192 238 139 30 chr5 18130889 18130990 -184954542 + L3 LINE CR1 1424 1535 -42 309 300 11 0 chr5 18131072 18131162 -184954370 + MIR SINE MIR 65 155 -107 207 200 33 33 chr5 18132776 18132836 -184952696 + MIR SINE MIR 77 136 -126 207 69 0 0 chr5 18134390 18134419 -184951113 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 2094 122 10 7 chr5 18135203 18135507 -184950025 + AluSx SINE Alu 1 305 -7 27 0 0 0 chr5 18135687 18135714 -184949818 + AT_rich Low_complexity Low_complexity 1 27 0 207 0 0 0 chr5 18136369 18136392 -184949140 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 251 295 21 0 chr5 18140669 18140764 -184944768 - MIR SINE MIR -120 142 46 248 311 47 0 chr5 18140808 18140914 -184944618 - L2 LINE L2 -14 3299 3189 201 191 24 0 chr5 18141296 18141338 -184944194 + T-rich Low_complexity Low_complexity 4 46 0 2120 118 17 0 chr5 18142195 18142483 -184943049 - AluSx SINE Alu -19 293 1 229 296 31 31 chr5 18142855 18142953 -184942579 - L2 LINE L2 -2 3270 3173 6500 122 144 125 chr5 18143002 18144679 -184940853 - pTR5 LTR ERV1 0 2438 375 24 0 0 0 chr5 18145628 18145652 -184939880 + GC_rich Low_complexity Low_complexity 1 24 0 321 284 11 0 chr5 18146532 18146627 -184938905 - L2 LINE L2 -24 3289 3194 184 306 14 56 chr5 18147032 18147104 -184938428 + L2 LINE L2 3162 3230 -42 1158 147 11 0 chr5 18147833 18148010 -184937522 + AluSg/x SINE Alu 124 302 -10 2473 84 0 3 chr5 18148157 18148468 -184937064 - AluY SINE Alu -1 310 1 1578 201 194 11 chr5 18154016 18154460 -184931072 - MER77 LTR ERV1 -4 601 77 231 291 35 12 chr5 18154931 18155017 -184930515 - L1ME4a LINE L1 -98 6023 5936 247 273 11 34 chr5 18155068 18155156 -184930376 - L1ME4a LINE L1 -1940 5868 5783 725 202 60 27 chr5 18155173 18155356 -184930176 - MIR SINE MIR -17 245 57 21 0 0 0 chr5 18155360 18155381 -184930151 + AT_rich Low_complexity Low_complexity 1 21 0 1910 140 17 3 chr5 18155786 18156079 -184929453 + AluJo SINE Alu 1 297 -15 261 250 107 6 chr5 18157346 18157514 -184928018 + L1M4 LINE L1 3029 3213 -2933 388 268 27 0 chr5 18160191 18160303 -184925229 + L2 LINE L2 3156 3270 -2 28 48 0 0 chr5 18161158 18161200 -184924332 + AT_rich Low_complexity Low_complexity 1 42 0 278 245 21 43 chr5 18162739 18162833 -184922699 + MIR SINE MIR 153 244 -18 1810 158 3 38 chr5 18162918 18163234 -184922298 - AluJo SINE Alu -7 305 1 23 33 0 0 chr5 18164159 18164189 -184921343 + AT_rich Low_complexity Low_complexity 1 30 0 2298 112 6 6 chr5 18164770 18165082 -184920450 + AluSx SINE Alu 1 312 0 4706 210 96 9 chr5 18165615 18166770 -184918762 - Charlie1a DNA MER1_type -200 1255 1 1548 182 13 48 chr5 18166931 18167244 -184918288 + AluJo SINE Alu 1 302 -10 29 28 0 0 chr5 18167911 18167947 -184917585 + AT_rich Low_complexity Low_complexity 1 36 0 990 176 0 6 chr5 18169072 18169242 -184916290 + FAM SINE Alu 3 171 -4 773 142 0 0 chr5 18169325 18169438 -184916094 + FLAM_A SINE Alu 21 133 -9 222 91 0 0 chr5 18170022 18170055 -184915477 + (T)n Simple_repeat Simple_repeat 1 33 0 228 135 0 0 chr5 18170530 18170567 -184914965 - MER5A DNA MER1_type -152 37 1 203 326 57 46 chr5 18171420 18171595 -184913937 - L2 LINE L2 -39 3274 3098 27 29 0 0 chr5 18172458 18172492 -184913040 + AT_rich Low_complexity Low_complexity 1 34 0 1994 177 55 13 chr5 18172858 18173315 -184912217 - L1MB3 LINE L1 -2 6181 5706 693 321 19 0 chr5 18173617 18173829 -184911703 - MIR SINE MIR -41 221 6 2416 87 0 7 chr5 18173964 18174262 -184911270 + AluSp SINE Alu 1 296 -17 405 205 0 0 chr5 18175760 18175877 -184909655 + (CGG)n Simple_repeat Simple_repeat 3 119 0 27 73 0 0 chr5 18176026 18176081 -184909451 + GC_rich Low_complexity Low_complexity 1 55 0 1938 101 42 49 chr5 18178259 18178546 -184906986 + AluSg SINE Alu 1 285 -25 234 0 0 0 chr5 18181360 18181386 -184904146 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1311 239 30 66 chr5 18181448 18181513 -184904019 - MLT2D LTR ERVL -2 412 346 9452 150 77 92 chr5 18181513 18182880 -184902652 + Tigger1 DNA MER2_type 1 1387 -1031 2130 141 0 0 chr5 18182880 18183179 -184902353 + AluSx SINE Alu 1 299 -13 9452 150 77 92 chr5 18183179 18183950 -184901582 + Tigger1 DNA MER2_type 1387 2101 -317 2236 96 7 7 chr5 18183950 18184242 -184901290 + AluY SINE Alu 1 292 -19 9452 150 77 92 chr5 18184242 18184556 -184900976 + Tigger1 DNA MER2_type 2101 2418 0 1311 239 30 66 chr5 18184556 18184917 -184900615 - MLT2D LTR ERVL -68 346 1 2357 87 3 3 chr5 18188035 18188335 -184897197 + AluY SINE Alu 1 300 -11 1899 145 23 13 chr5 18188875 18189179 -184896353 + AluJb SINE Alu 1 307 -5 22 56 0 0 chr5 18189319 18189355 -184896177 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 18189459 18189481 -184896051 + AT_rich Low_complexity Low_complexity 1 22 0 869 237 48 24 chr5 18190466 18190757 -184894775 - MER33 DNA MER1_type 0 324 27 300 301 70 6 chr5 18191098 18191254 -184894278 + MER105 DNA DNA 2 167 -37 433 233 137 9 chr5 18191793 18192012 -184893520 - MLT1H LTR MaLR -230 319 73 335 212 82 0 chr5 18193812 18193897 -184891635 + MER69A DNA AcHobo 32 123 -54 557 287 79 0 chr5 18194679 18194881 -184890651 + MIR SINE MIR 35 252 -10 218 231 0 19 chr5 18194998 18195050 -184890482 - MIR SINE MIR -118 144 94 415 278 11 28 chr5 18199542 18199722 -184885810 + (TGG)n Simple_repeat Simple_repeat 3 179 0 206 302 75 9 chr5 18200778 18200884 -184884648 + MIR SINE MIR 79 191 -71 362 376 18 0 chr5 18201808 18201973 -184883559 + MIR SINE MIR 86 253 -9 1365 254 13 11 chr5 18202675 18203062 -184882470 + MER54A LTR ERVL 472 896 -5 28 48 0 0 chr5 18204148 18204190 -184881342 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr5 18204403 18204433 -184881099 + AT_rich Low_complexity Low_complexity 1 30 0 2510 64 0 3 chr5 18205096 18205394 -184880138 + AluY SINE Alu 8 304 -7 1549 197 10 27 chr5 18207146 18207445 -184878087 - AluJo SINE Alu -18 294 1 2363 119 0 0 chr5 18207512 18207824 -184877708 - AluSx SINE Alu 0 312 1 456 181 43 0 chr5 18208419 18208513 -184877019 + MIR SINE MIR 65 162 -100 320 297 27 18 chr5 18208932 18209043 -184876489 - L2 LINE L2 -1 3312 3201 278 156 0 47 chr5 18210147 18210211 -184875321 - L1MB2 LINE L1 0 6171 6111 196 258 48 32 chr5 18213367 18213429 -184872103 - L2 LINE L2 -5 3267 3205 477 0 0 0 chr5 18216764 18216817 -184868715 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 2219 114 3 3 chr5 18216853 18217152 -184868380 + AluSx SINE Alu 1 299 -13 690 194 0 0 chr5 18218375 18218499 -184867033 + FLAM_A SINE Alu 1 124 -9 207 0 0 0 chr5 18219456 18219479 -184866053 + (T)n Simple_repeat Simple_repeat 1 23 0 577 170 0 0 chr5 18219497 18219603 -184865929 + FRAM SINE Alu 70 175 -1 2582 173 44 23 chr5 18220589 18221129 -184864403 - L1MB3 LINE L1 -12 6171 5617 1883 181 34 0 chr5 18221129 18221482 -184864050 + MLT1A1 LTR MaLR 1 365 0 2582 173 44 23 chr5 18221482 18221512 -184864020 - L1MB3 LINE L1 -566 5617 5589 233 304 59 20 chr5 18221636 18221738 -184863794 + L2 LINE L2 2701 2806 -508 213 286 0 0 chr5 18221744 18221793 -184863739 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 0 0 0 chr5 18225746 18225766 -184859766 + (A)n Simple_repeat Simple_repeat 1 20 0 2047 125 14 0 chr5 18226209 18226552 -184858980 - AluSx SINE Alu 0 347 1 1856 178 65 11 chr5 18227235 18227605 -184857927 - MLT1B LTR MaLR 0 390 1 226 309 62 0 chr5 18227712 18227793 -184857739 - MIR SINE MIR -78 184 99 320 272 53 18 chr5 18227902 18228016 -184857516 - MIR3 SINE MIR -77 131 14 21 0 0 0 chr5 18230025 18230046 -184855486 + AT_rich Low_complexity Low_complexity 1 21 0 3788 226 92 29 chr5 18230048 18230275 -184855257 - L1MC4a LINE L1 -5 7803 7592 516 118 53 0 chr5 18230275 18230351 -184855181 + MADE1 DNA Mariner 1 80 0 3788 226 92 29 chr5 18230351 18230630 -184854902 - L1MC4a LINE L1 -216 7592 7332 1664 167 80 22 chr5 18230630 18230954 -184854578 - MER61A LTR ERV1 0 343 1 3788 226 92 29 chr5 18230954 18231549 -184853983 - L1MC4a LINE L1 -476 7332 6631 2118 114 93 32 chr5 18231638 18231981 -184853551 - THE1B LTR MaLR 0 364 1 4204 80 25 6 chr5 18231981 18232531 -184853001 - THE1B-int LTR MaLR 0 1580 1020 670 207 80 142 chr5 18232558 18232973 -184852559 - L1MC4a LINE L1 -1226 6582 6194 1528 189 103 26 chr5 18233012 18233361 -184852171 - MLT1B LTR MaLR -12 378 3 2237 120 20 0 chr5 18234553 18234854 -184850678 - AluSg SINE Alu -3 307 1 192 238 139 30 chr5 18238174 18238275 -184847257 + L3 LINE CR1 1424 1535 -42 309 300 11 0 chr5 18238357 18238447 -184847085 + MIR SINE MIR 65 155 -107 207 200 33 33 chr5 18240062 18240122 -184845410 + MIR SINE MIR 77 136 -126 207 69 0 0 chr5 18241676 18241705 -184843827 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 2094 122 10 7 chr5 18242489 18242793 -184842739 + AluSx SINE Alu 1 305 -7 27 0 0 0 chr5 18242973 18243000 -184842532 + AT_rich Low_complexity Low_complexity 1 27 0 207 0 0 0 chr5 18243655 18243678 -184841854 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 251 295 21 0 chr5 18247955 18248050 -184837482 - MIR SINE MIR -120 142 46 248 311 47 0 chr5 18248094 18248200 -184837332 - L2 LINE L2 -14 3299 3189 201 191 24 0 chr5 18248582 18248624 -184836908 + T-rich Low_complexity Low_complexity 4 46 0 2120 118 17 0 chr5 18249481 18249769 -184835763 - AluSx SINE Alu -19 293 1 229 296 31 31 chr5 18250141 18250239 -184835293 - L2 LINE L2 -2 3270 3173 6517 122 144 125 chr5 18250288 18251965 -184833567 - pTR5 LTR ERV1 0 2438 375 28 0 0 0 chr5 18252914 18252942 -184832590 + GC_rich Low_complexity Low_complexity 1 28 0 321 284 11 0 chr5 18253820 18253915 -184831617 - L2 LINE L2 -24 3289 3194 184 306 14 56 chr5 18254320 18254392 -184831140 + L2 LINE L2 3162 3230 -42 1158 147 11 0 chr5 18255121 18255298 -184830234 + AluSg/x SINE Alu 124 302 -10 2438 87 0 3 chr5 18255445 18255756 -184829776 - AluY SINE Alu -1 310 1 1578 201 194 11 chr5 18261304 18261748 -184823784 - MER77 LTR ERV1 -4 601 77 231 291 35 12 chr5 18262219 18262305 -184823227 - L1ME4a LINE L1 -98 6023 5936 247 273 11 34 chr5 18262356 18262444 -184823088 - L1ME4a LINE L1 -1940 5868 5783 725 202 60 27 chr5 18262461 18262644 -184822888 - MIR SINE MIR -17 245 57 21 0 0 0 chr5 18262648 18262669 -184822863 + AT_rich Low_complexity Low_complexity 1 21 0 1910 140 17 3 chr5 18263074 18263367 -184822165 + AluJo SINE Alu 1 297 -15 261 250 107 6 chr5 18264630 18264798 -184820734 + L1M4 LINE L1 3029 3213 -2933 392 261 27 0 chr5 18267472 18267583 -184817949 + L2 LINE L2 3157 3270 -2 28 48 0 0 chr5 18268440 18268482 -184817050 + AT_rich Low_complexity Low_complexity 1 42 0 278 245 21 43 chr5 18270020 18270114 -184815418 + MIR SINE MIR 153 244 -18 1810 158 3 38 chr5 18270199 18270515 -184815017 - AluJo SINE Alu -7 305 1 23 33 0 0 chr5 18271439 18271469 -184814063 + AT_rich Low_complexity Low_complexity 1 30 0 2298 112 6 6 chr5 18272050 18272362 -184813170 + AluSx SINE Alu 1 312 0 4471 203 100 10 chr5 18272895 18274050 -184811482 - Charlie1a DNA MER1_type -200 1255 1 1621 176 13 48 chr5 18274211 18274524 -184811008 + AluJo SINE Alu 1 302 -10 29 28 0 0 chr5 18275191 18275227 -184810305 + AT_rich Low_complexity Low_complexity 1 36 0 1017 176 0 6 chr5 18276352 18276522 -184809010 + FAM SINE Alu 3 171 -4 802 142 0 0 chr5 18276605 18276718 -184808814 + FLAM_A SINE Alu 21 133 -9 222 91 0 0 chr5 18277302 18277335 -184808197 + (T)n Simple_repeat Simple_repeat 1 33 0 265 84 42 141 chr5 18277776 18277847 -184807685 - MER5A DNA MER1_type -125 64 1 222 326 57 46 chr5 18278700 18278875 -184806657 - L2 LINE L2 -39 3274 3098 27 29 0 0 chr5 18279738 18279772 -184805760 + AT_rich Low_complexity Low_complexity 1 34 0 2120 177 55 13 chr5 18280138 18280595 -184804937 - L1MB3 LINE L1 -2 6181 5706 731 321 19 0 chr5 18280897 18281109 -184804423 - MIR SINE MIR -41 221 6 2410 87 0 7 chr5 18281244 18281542 -184803990 + AluSp SINE Alu 1 296 -17 405 205 0 0 chr5 18283040 18283157 -184802375 + (CGG)n Simple_repeat Simple_repeat 3 119 0 27 73 0 0 chr5 18283306 18283361 -184802171 + GC_rich Low_complexity Low_complexity 1 55 0 1925 101 42 49 chr5 18285537 18285824 -184799708 + AluSg SINE Alu 1 285 -25 234 0 0 0 chr5 18288639 18288665 -184796867 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1256 239 30 66 chr5 18288727 18288792 -184796740 - MLT2D LTR ERVL -2 412 346 10260 148 78 91 chr5 18288792 18290157 -184795375 + Tigger1 DNA MER2_type 1 1383 -1035 2103 144 0 0 chr5 18290157 18290456 -184795076 + AluSx SINE Alu 1 299 -13 10260 148 78 91 chr5 18290456 18291227 -184794305 + Tigger1 DNA MER2_type 1383 2101 -317 2223 96 7 7 chr5 18291227 18291519 -184794013 + AluY SINE Alu 1 292 -19 10260 148 78 91 chr5 18291519 18291833 -184793699 + Tigger1 DNA MER2_type 2101 2418 0 1256 239 30 66 chr5 18291833 18292194 -184793338 - MLT2D LTR ERVL -68 346 1 2348 87 3 3 chr5 18295310 18295610 -184789922 + AluY SINE Alu 1 300 -11 1894 145 23 13 chr5 18296150 18296454 -184789078 + AluJb SINE Alu 1 307 -5 226 200 0 0 chr5 18296552 18296602 -184788930 + L1ME3A LINE L1 6113 6162 -8 22 0 0 0 chr5 18296734 18296756 -184788776 + AT_rich Low_complexity Low_complexity 1 22 0 871 237 68 23 chr5 18297741 18298049 -184787483 - MER33 DNA MER1_type 0 324 3 274 301 70 6 chr5 18298373 18298529 -184787003 + MER105 DNA DNA 2 167 -37 390 228 151 23 chr5 18299068 18299287 -184786245 - MLT1H LTR MaLR -230 319 73 324 188 82 0 chr5 18301087 18301172 -184784360 + MER69A DNA AcHobo 32 123 -54 592 282 79 0 chr5 18301954 18302156 -184783376 + MIR SINE MIR 35 252 -10 229 231 0 19 chr5 18302273 18302325 -184783207 - MIR SINE MIR -118 144 94 431 228 60 20 chr5 18306931 18307080 -184778452 - L1M4 LINE L1 -1383 4763 4609 477 0 0 0 chr5 18307166 18307219 -184778313 + (TC)n Simple_repeat Simple_repeat 2 54 0 477 0 0 0 chr5 18307218 18307271 -184778261 + (TA)n Simple_repeat Simple_repeat 2 54 0 2227 70 11 21 chr5 18307271 18307558 -184777974 - AluY SINE Alu -27 284 1 572 223 74 75 chr5 18307565 18307815 -184777717 - L1ME3 LINE L1 -19 6147 5894 * 4171 208 54 23 chr5 18307810 18307885 -184777647 - L1MD1 LINE L1 0 6636 6565 2431 101 0 3 chr5 18307885 18308193 -184777339 + AluSp SINE Alu 1 307 -6 4171 208 54 23 chr5 18308193 18308761 -184776771 - L1MD1 LINE L1 -71 6565 6016 1830 103 10 164 chr5 18308761 18309157 -184776375 - MER1B DNA MER1_type -2 335 1 4171 208 54 23 chr5 18309157 18309828 -184775704 - L1MD1 LINE L1 -620 6016 5367 2284 108 0 0 chr5 18309828 18310125 -184775407 + AluY SINE Alu 1 297 -14 4171 208 54 23 chr5 18310125 18310753 -184774779 - L1MD1 LINE L1 -1269 5367 4628 2282 105 6 10 chr5 18310769 18311082 -184774450 - AluSx SINE Alu 0 312 1 472 182 23 0 chr5 18311117 18311205 -184774327 + Tigger5 DNA MER2_type 2234 2323 0 1458 184 48 6 chr5 18311205 18311521 -184774011 - L1MD1 LINE L1 -4332 2208 1880 399 266 42 91 chr5 18311526 18311767 -184773765 - MER34 LTR ERV1 0 542 314 1142 221 13 4 chr5 18311787 18312018 -184773514 + AluJo SINE Alu 1 233 -79 495 163 12 0 chr5 18312018 18312098 -184773434 - AluS SINE Alu -229 83 3 452 122 14 0 chr5 18312100 18312174 -184773358 - AluS SINE Alu -7 304 230 541 145 0 0 chr5 18312175 18312251 -184773281 + AluJo SINE Alu 217 292 -20 2289 224 43 8 chr5 18312511 18313061 -184772471 - L1MD1 LINE L1 -5638 902 18 5786 109 9 56 chr5 18314028 18314720 -184770812 - L1PA14 LINE L1 -3 6158 5557 2464 87 0 0 chr5 18314720 18315019 -184770513 - AluSx SINE Alu -11 301 3 5786 109 9 56 chr5 18315019 18315750 -184769782 - L1PA14 LINE L1 -604 5557 4793 2409 98 7 0 chr5 18316130 18316437 -184769095 + AluSx SINE Alu 1 309 -3 1057 251 98 24 chr5 18316607 18317057 -184768475 - MLT1D LTR MaLR 0 505 23 274 308 228 8 chr5 18317184 18317447 -184768085 + L2 LINE L2 2422 2742 -572 246 281 56 119 chr5 18317560 18317863 -184767669 + L2 LINE L2 2933 3216 -56 2332 106 0 0 chr5 18317924 18318225 -184767307 - AluSx SINE Alu -1 311 11 280 213 75 11 chr5 18318810 18318904 -184766628 - LTR33 LTR ERVL -2 519 420 481 232 86 7 chr5 18318960 18319111 -184766421 - LTR33 LTR ERVL -338 183 21 4760 139 39 44 chr5 18319148 18319531 -184766001 + L1MC1 LINE L1 5452 5836 -497 2185 128 0 0 chr5 18319531 18319829 -184765703 + AluSx SINE Alu 3 300 -12 4760 139 39 44 chr5 18319829 18320323 -184765209 + L1MC1 LINE L1 5836 6324 -9 2237 104 0 0 chr5 18320326 18320647 -184764885 + AluSx SINE Alu 3 323 0 2437 98 0 0 chr5 18321626 18321933 -184763599 - AluSx SINE Alu -5 307 1 22 0 0 0 chr5 18322062 18322084 -184763448 + AT_rich Low_complexity Low_complexity 1 22 0 2377 78 3 3 chr5 18322674 18322969 -184762563 - AluSc SINE Alu -14 295 1 1156 253 40 33 chr5 18323198 18323335 -184762197 + L1ME LINE L1 4369 4504 -1642 2335 101 0 3 chr5 18323335 18323632 -184761900 - AluSg SINE Alu -14 296 1 1156 253 40 33 chr5 18323632 18323959 -184761573 + L1ME LINE L1 4504 4815 -1331 2165 114 14 3 chr5 18323993 18324290 -184761242 - AluSx SINE Alu -12 300 1 242 296 0 0 chr5 18324752 18324833 -184760699 + L1ME LINE L1 5727 5807 -314 22 0 0 0 chr5 18324891 18324913 -184760619 + AT_rich Low_complexity Low_complexity 1 22 0 329 143 16 16 chr5 18325185 18325248 -184760284 + MER5A DNA MER1_type 9 71 -118 1866 98 4 0 chr5 18325325 18325571 -184759961 - AluSx SINE Alu -10 302 56 263 234 290 0 chr5 18325843 18325950 -184759582 + MER5A DNA MER1_type 46 183 -6 2183 115 13 0 chr5 18326094 18326398 -184759134 + AluSp SINE Alu 2 309 -4 358 253 152 0 chr5 18327212 18327311 -184758221 - MER81 DNA DNA 0 114 1 2481 57 3 29 chr5 18328634 18328949 -184756583 - AluY SINE Alu -4 307 1 2074 113 46 65 chr5 18329040 18329368 -184756164 + THE1B LTR MaLR 1 323 -41 2603 64 0 6 chr5 18329368 18329679 -184755853 - AluY SINE Alu -2 309 1 2074 113 46 65 chr5 18329679 18329721 -184755811 + THE1B LTR MaLR 323 364 0 2379 95 3 9 chr5 18330731 18331046 -184754486 - AluSq SINE Alu 0 313 1 719 208 8 0 chr5 18331093 18331218 -184754314 + FLAM_A SINE Alu 2 127 -6 825 197 26 0 chr5 18331661 18331813 -184753719 + FRAM SINE Alu 1 156 -20 1248 174 4 37 chr5 18331876 18332118 -184753414 - L1MD3 LINE L1 -1022 6973 6740 2021 113 3 7 chr5 18332119 18332425 -184753107 + AluSx SINE Alu 1 305 0 2535 53 0 10 chr5 18332523 18332822 -184752710 - AluY SINE Alu -15 296 1 8263 166 23 88 chr5 18332823 18333916 -184751616 - L1M2 LINE L1 -1765 5443 4280 2188 122 20 0 chr5 18333916 18334219 -184751313 - AluSx SINE Alu 0 312 4 8263 166 23 88 chr5 18334219 18334714 -184750818 - L1M2 LINE L1 -2928 4280 3754 2311 118 0 6 chr5 18334714 18335028 -184750504 - AluSx SINE Alu 0 312 1 8263 166 23 88 chr5 18335028 18335347 -184750185 - L1M2 LINE L1 -3454 3754 3686 1734 114 0 0 chr5 18335347 18335574 -184749958 - AluSg/x SINE Alu -8 302 76 8263 166 23 88 chr5 18335574 18335793 -184749739 - L1M2 LINE L1 -3522 3686 3454 2259 127 99 23 chr5 18335796 18336189 -184749343 - MSTA LTR MaLR 0 428 6 5048 198 89 41 chr5 18336245 18337683 -184747849 - L1M2 LINE L1 -3788 3420 1920 327 260 53 77 chr5 18337683 18337852 -184747680 - MLT1K LTR MaLR -19 569 405 466 245 76 54 chr5 18337853 18338196 -184747336 - L1M2 LINE L1 -5297 1912 1539 * 2097 253 137 30 chr5 18338172 18338871 -184746661 - L1M2 LINE L1 -6399 810 37 1167 134 21 0 chr5 18338871 18339057 -184746475 - AluSg/x SINE Alu -2 310 121 278 213 0 0 chr5 18339059 18339106 -184746426 - L1 LINE L1 -6790 59 13 232 261 0 31 chr5 18339260 18339325 -184746207 + MLT1K LTR MaLR 1 63 -525 411 259 85 110 chr5 18339374 18339810 -184745722 + MLT1K LTR MaLR 164 588 0 355 241 7 7 chr5 18341043 18341180 -184744352 + CT-rich Low_complexity Low_complexity 2 138 0 453 321 18 87 chr5 18341748 18341782 -184743750 - L2 LINE L2 -1 3312 3277 294 29 0 0 chr5 18341782 18341817 -184743715 + (TG)n Simple_repeat Simple_repeat 1 35 0 453 321 18 87 chr5 18341817 18341948 -184743584 - L2 LINE L2 -36 3277 3139 2224 135 15 42 chr5 18341948 18342349 -184743183 + MLT1B LTR MaLR 1 390 0 453 321 18 87 chr5 18342349 18342562 -184742970 - L2 LINE L2 -174 3139 2959 14481 118 32 53 chr5 18342787 18342964 -184742568 - Tigger1 DNA MER2_type 0 2418 2239 2179 121 7 0 chr5 18342964 18343261 -184742271 + AluSc SINE Alu 1 299 -10 14481 118 32 53 chr5 18343261 18343686 -184741846 - Tigger1 DNA MER2_type -179 2239 1807 2432 91 0 0 chr5 18343686 18343995 -184741537 + AluSg SINE Alu 1 309 -1 14481 118 32 53 chr5 18343995 18345860 -184739672 - Tigger1 DNA MER2_type -611 1807 1 2068 238 24 24 chr5 18346768 18347226 -184738306 + LTR40a LTR ERVL 62 519 0 22 56 0 0 chr5 18347244 18347280 -184738252 + AT_rich Low_complexity Low_complexity 1 36 0 1896 88 0 0 chr5 18347338 18347566 -184737966 - AluSc SINE Alu -21 288 61 555 329 32 5 chr5 18347606 18347822 -184737710 - MIR SINE MIR -4 258 37 2011 178 20 0 chr5 18347968 18348316 -184737216 + MLT1A1 LTR MaLR 11 365 0 1885 117 50 18 chr5 18348775 18349057 -184736475 + AluSq SINE Alu 1 291 -22 2190 133 33 28 chr5 18349831 18350193 -184735339 + THE1B LTR MaLR 1 364 0 2504 78 0 0 chr5 18350759 18351065 -184734467 - AluY SINE Alu -5 306 1 236 307 58 58 chr5 18351091 18351228 -184734304 + MER5B DNA MER1_type 20 156 -22 2791 135 57 60 chr5 18351410 18352011 -184733521 - MER4D LTR ERV1 -1 865 307 2285 117 0 0 chr5 18352011 18352310 -184733222 + AluSx SINE Alu 1 299 -13 4031 145 45 24 chr5 18352319 18352600 -184732932 + MER50 LTR ERV1 1 275 -459 1934 108 0 7 chr5 18352600 18352878 -184732654 - AluSc SINE Alu 0 309 34 4031 145 45 24 chr5 18352878 18353293 -184732239 + MER50 LTR ERV1 275 711 -23 4583 119 26 45 chr5 18353294 18353979 -184731553 + MER49 LTR ERV1 196 892 -31 2081 130 0 26 chr5 18353979 18354286 -184731246 + AluSx SINE Alu 1 299 -13 222 37 0 0 chr5 18354286 18354313 -184731219 + (GA)n Simple_repeat Simple_repeat 2 28 0 4583 119 26 45 chr5 18354313 18354368 -184731164 + MER49 LTR ERV1 890 923 0 2368 99 0 7 chr5 18354772 18355074 -184730458 + AluSx SINE Alu 2 301 -11 2227 105 3 0 chr5 18356319 18356615 -184728917 + AluSp SINE Alu 1 297 -16 316 229 160 38 chr5 18357092 18357223 -184728309 - MIR SINE MIR 0 262 116 946 188 17 6 chr5 18357230 18357406 -184728126 - MLT1A1 LTR MaLR -185 180 3 954 248 58 69 chr5 18357411 18357802 -184727730 - MLT1G LTR MaLR -217 338 16 429 54 0 0 chr5 18358516 18358572 -184726960 + (TG)n Simple_repeat Simple_repeat 1 56 0 451 276 0 24 chr5 18358713 18358840 -184726692 + MLT1K LTR MaLR 437 560 -28 703 276 112 53 chr5 18359806 18359892 -184725640 - HAL1 LINE L1 -127 2380 2300 2056 126 10 7 chr5 18359892 18360201 -184725331 - AluSx SINE Alu -2 310 1 703 276 112 53 chr5 18360201 18360658 -184724874 - HAL1 LINE L1 -207 2300 1805 1440 124 179 19 chr5 18360800 18360915 -184724617 - AluSg1 SINE Alu -11 298 203 2487 99 8 6 chr5 18360915 18361269 -184724263 - THE1A LTR MaLR 0 355 1 11621 105 5 1 chr5 18361269 18362842 -184722690 - THE1A-int LTR MaLR 0 1580 1 2485 107 8 8 chr5 18362842 18363197 -184722335 - THE1A LTR MaLR 0 355 1 1440 124 179 19 chr5 18363197 18363336 -184722196 - AluSg1 SINE Alu -105 204 1 259 301 21 11 chr5 18363585 18363678 -184721854 + MIR SINE MIR 31 124 -138 181 261 23 68 chr5 18363919 18364007 -184721525 - MIR SINE MIR -1 261 178 2072 140 10 0 chr5 18364021 18364452 -184721080 - AluSx SINE Alu 0 434 1 454 222 90 35 chr5 18364498 18364642 -184720890 + MIR SINE MIR 111 262 0 196 261 0 0 chr5 18365009 18365055 -184720477 + L2 LINE L2 3256 3301 -12 1489 78 74 18 chr5 18365277 18365494 -184720038 - MER30 DNA MER1_type -1 229 1 296 198 209 11 chr5 18365703 18365794 -184719738 - L2 LINE L2 0 3313 3205 1987 159 0 3 chr5 18366257 18366558 -184718974 + AluJb SINE Alu 1 300 -12 707 228 7 0 chr5 18367131 18367280 -184718252 + MER58B DNA MER1_type 7 156 -185 1019 168 0 6 chr5 18367282 18367443 -184718089 + FRAM SINE Alu 1 155 -21 715 207 14 21 chr5 18367518 18367663 -184717869 + MER58B DNA MER1_type 196 339 -2 316 268 109 7 chr5 18367859 18367997 -184717535 - L1ME4a LINE L1 -39 6082 5931 455 274 91 32 chr5 18368050 18368236 -184717296 - MLT1K LTR MaLR -111 477 281 1857 190 16 38 chr5 18368270 18368643 -184716889 - MLT1A1 LTR MaLR 0 365 1 345 329 20 13 chr5 18368749 18368898 -184716634 - MIR3 SINE MIR -2 206 57 650 229 0 0 chr5 18369032 18369163 -184716369 + FLAM_A SINE Alu 2 132 -1 2449 91 3 0 chr5 18369165 18369474 -184716058 + AluY SINE Alu 1 310 -1 193 308 145 38 chr5 18369953 18370068 -184715464 - L2 LINE L2 -2 3270 3132 2203 117 0 13 chr5 18370068 18370377 -184715155 - AluSx SINE Alu -7 305 1 193 308 145 38 chr5 18370377 18370420 -184715112 - L2 LINE L2 -140 3132 3095 21 0 0 0 chr5 18370989 18371010 -184714522 + AT_rich Low_complexity Low_complexity 1 21 0 349 125 0 0 chr5 18371023 18371079 -184714453 - Alu SINE Alu -1 301 246 1340 160 38 52 chr5 18371081 18371368 -184714164 - L1M3 LINE L1 -557 5623 5341 1244 184 5 9 chr5 18371371 18371594 -184713938 - AluJo SINE Alu -5 307 86 963 262 0 5 chr5 18371651 18371872 -184713660 - AluJo SINE Alu -92 220 1 458 252 31 25 chr5 18372145 18372304 -184713228 - MIR SINE MIR -55 207 48 1317 123 238 12 chr5 18372361 18372605 -184712927 - AluSg1 SINE Alu -10 299 1 6741 167 123 38 chr5 18372634 18374199 -184711333 + pTR5 LTR ERV1 741 2438 0 238 156 0 0 chr5 18374557 18374593 -184710939 + L1MB3 LINE L1 6107 6145 -38 2090 119 7 14 chr5 18374593 18374886 -184710646 + AluSx SINE Alu 1 291 -21 632 261 101 5 chr5 18375468 18375656 -184709876 - MIR SINE MIR -30 232 27 464 225 46 40 chr5 18376195 18376346 -184709186 + MIR SINE MIR 109 260 -2 23 0 0 0 chr5 18377347 18377370 -184708162 + GC_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 18377507 18377531 -184708001 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 2058 92 3 68 chr5 18378054 18378380 -184707152 + AluSg SINE Alu 1 305 -5 1200 231 132 21 chr5 18384097 18384549 -184700983 - MLT1J LTR MaLR -4 482 7 412 272 185 30 chr5 18384591 18385029 -184700503 - L2 LINE L2 -1 3312 2807 684 154 9 0 chr5 18385044 18385154 -184700378 + MER81 DNA DNA 3 113 -1 1926 130 35 3 chr5 18385209 18385493 -184700039 + AluSx SINE Alu 1 293 -19 217 232 147 32 chr5 18385787 18385882 -184699650 + MER5B DNA MER1_type 7 112 -66 268 247 78 0 chr5 18385924 18386001 -184699531 - MER5A DNA MER1_type -106 83 1 270 288 62 0 chr5 18386684 18386764 -184698768 + L3 LINE CR1 762 846 -731 431 327 82 67 chr5 18387232 18387341 -184698191 + L3 LINE CR1 911 1017 -560 1519 219 60 0 chr5 18387341 18387660 -184697872 + MER58B DNA MER1_type 4 341 0 431 327 82 67 chr5 18387660 18387880 -184697652 + L3 LINE CR1 1017 1245 -332 224 298 0 0 chr5 18388232 18388289 -184697243 + L3 LINE CR1 1254 1310 -267 240 306 114 42 chr5 18388352 18388712 -184696820 + L2 LINE L2 2885 3270 -2 199 295 98 0 chr5 18388722 18388844 -184696688 + L3 LINE CR1 1363 1496 -81 243 0 0 0 chr5 18391181 18391208 -184694324 + (T)n Simple_repeat Simple_repeat 1 27 0 855 185 107 56 chr5 18392211 18392570 -184692962 - MSTC LTR MaLR 0 428 1 261 255 51 20 chr5 18392582 18392680 -184692852 + MIR SINE MIR 47 147 -115 260 324 28 19 chr5 18392701 18392809 -184692723 - MIR SINE MIR 0 262 154 247 298 48 24 chr5 18392886 18393010 -184692522 - MIR SINE MIR -105 157 31 312 297 11 0 chr5 18393016 18393107 -184692425 + MIR SINE MIR 153 244 -18 375 335 65 6 chr5 18393969 18394139 -184691393 + L1MC/D LINE L1 5578 5757 -2051 685 136 0 59 chr5 18394147 18394265 -184691267 + FRAM SINE Alu 43 153 -23 228 268 14 0 chr5 18394290 18394361 -184691171 + L1MC/D LINE L1 5788 5859 -1949 2109 125 3 3 chr5 18394747 18395044 -184690488 + AluSp SINE Alu 1 297 -16 2757 77 30 6 chr5 18395580 18395946 -184689586 + THE1C LTR MaLR 1 375 0 245 289 132 35 chr5 18396140 18396254 -184689278 - MIR SINE MIR -118 144 20 23 86 0 0 chr5 18396322 18396380 -184689152 + AT_rich Low_complexity Low_complexity 1 58 0 1745 180 10 3 chr5 18397981 18398276 -184687256 - AluJb SINE Alu -15 297 1 3597 180 85 12 chr5 18398428 18399323 -184686209 - L1ME1 LINE L1 -29 6137 5180 203 161 0 0 chr5 18399425 18399456 -184686076 + (TG)n Simple_repeat Simple_repeat 2 32 0 1443 206 4 11 chr5 18399590 18399862 -184685670 + AluJo SINE Alu 1 270 -42 291 57 0 0 chr5 18399862 18399897 -184685635 - THE1A LTR MaLR 0 355 321 * 332 80 22 0 chr5 18399885 18399939 -184685593 - THE1B LTR MaLR -300 55 1 10897 97 12 46 chr5 18399939 18401574 -184683958 - THE1B-int LTR MaLR 0 1580 1 2156 116 53 44 chr5 18401574 18401935 -184683597 - THE1B LTR MaLR 0 364 1 296 219 68 68 chr5 18402053 18402199 -184683333 - MIR SINE MIR -57 205 60 2285 102 0 3 chr5 18402487 18402782 -184682750 + AluSx SINE Alu 1 294 -18 432 330 97 0 chr5 18403400 18403606 -184681926 + MIR SINE MIR 19 244 -18 1583 202 36 28 chr5 18403757 18404114 -184681418 - MLT1A1 LTR MaLR -5 360 1 2532 30 40 0 chr5 18405163 18405459 -184680073 - AluY SINE Alu -3 308 1 261 238 0 0 chr5 18406372 18406452 -184679080 + (TA)n Simple_repeat Simple_repeat 1 80 0 2017 184 25 70 chr5 18406659 18407186 -184678346 + MLT1D LTR MaLR 1 503 -2 656 122 47 61 chr5 18408423 18408470 -184677062 - L1MB3 LINE L1 -4 6179 6133 2241 96 7 3 chr5 18408470 18408763 -184676769 - AluSq SINE Alu -19 294 1 656 122 47 61 chr5 18408763 18408863 -184676669 - L1MB3 LINE L1 -50 6133 6034 277 247 112 0 chr5 18411527 18411616 -184673916 - MER5C DNA MER1_type 0 324 226 257 164 104 15 chr5 18411628 18411695 -184673837 - MER5C DNA MER1_type -202 122 50 2143 109 6 16 chr5 18412659 18412970 -184672562 + AluSx SINE Alu 1 308 -4 2393 93 0 13 chr5 18413607 18413919 -184671613 + AluSq SINE Alu 3 310 -3 300 212 0 0 chr5 18413919 18413985 -184671547 + (TA)n Simple_repeat Simple_repeat 1 66 0 1095 106 0 0 chr5 18414054 18414196 -184671336 + AluSg/x SINE Alu 155 296 -14 2240 228 101 136 chr5 18416795 18417472 -184668060 + L1MEc LINE L1 588 1287 -5109 1852 164 13 7 chr5 18417472 18417776 -184667756 + AluJo SINE Alu 1 306 -6 2240 228 101 136 chr5 18417776 18418132 -184667400 + L1MEc LINE L1 1287 1654 -4742 791 195 0 0 chr5 18418132 18418260 -184667272 + FAM SINE Alu 41 168 -17 2240 228 101 136 chr5 18418260 18418290 -184667242 + L1MEc LINE L1 1654 1684 -4712 2055 138 6 10 chr5 18418290 18418601 -184666931 + AluSx SINE Alu 1 310 -2 2240 228 101 136 chr5 18418601 18418801 -184666731 + L1MEc LINE L1 1684 1889 -4507 2360 95 0 0 chr5 18418801 18419096 -184666436 + AluSx SINE Alu 1 295 -17 2240 228 101 136 chr5 18419096 18419191 -184666341 + L1MEc LINE L1 1889 1986 -4410 2299 101 0 23 chr5 18419191 18419497 -184666035 + AluSc SINE Alu 1 299 -10 2240 228 101 136 chr5 18419497 18419769 -184665763 + L1MEc LINE L1 1986 2288 -4108 264 200 0 0 chr5 18419908 18419968 -184665564 + (TA)n Simple_repeat Simple_repeat 1 60 0 27 29 0 0 chr5 18420276 18420310 -184665222 + AT_rich Low_complexity Low_complexity 1 34 0 245 192 104 104 chr5 18420548 18420673 -184664859 - MLT1K LTR MaLR 0 588 464 1942 167 24 0 chr5 18422487 18422816 -184662716 + L1MA9 LINE L1 5376 5712 -600 494 143 62 27 chr5 18422849 18422961 -184662571 - L1MA9 LINE L1 -30 6282 6167 2031 172 154 44 chr5 18423008 18423100 -184662432 + L1MA9 LINE L1 5681 5762 -550 345 24 0 0 chr5 18423100 18423142 -184662390 + (CA)n Simple_repeat Simple_repeat 1 42 0 2031 172 154 44 chr5 18423142 18423596 -184661936 + L1MA9 LINE L1 5762 6287 -25 4782 141 19 70 chr5 18424261 18424648 -184660884 - L1MB8 LINE L1 -6 6172 5767 1591 191 32 0 chr5 18424648 18424930 -184660602 - AluJb SINE Alu -17 295 5 4782 141 19 70 chr5 18424930 18425409 -184660123 - L1MB8 LINE L1 -411 5767 5265 2121 133 36 30 chr5 18425409 18425770 -184659762 - THE1B LTR MaLR 0 364 2 2075 117 7 7 chr5 18425770 18426051 -184659481 - AluSx SINE Alu -31 281 1 4782 141 19 70 chr5 18426051 18426205 -184659327 - L1MB8 LINE L1 -911 5267 5180 21 0 0 0 chr5 18426662 18426683 -184658849 + AT_rich Low_complexity Low_complexity 1 21 0 2012 141 7 7 chr5 18426963 18427268 -184658264 - AluJb SINE Alu -7 305 1 186 235 0 0 chr5 18427548 18427582 -184657950 + MIR SINE MIR 25 58 -150 2410 97 3 0 chr5 18427622 18427930 -184657602 - AluSx SINE Alu -3 309 1 2241 111 7 0 chr5 18428472 18428779 -184656753 + AluSc SINE Alu 1 309 0 261 342 63 9 chr5 18428838 18428949 -184656583 - L2 LINE L2 -12 3260 3144 1967 122 3 18 chr5 18429074 18429360 -184656172 + AluSx SINE Alu 30 311 -1 504 179 75 0 chr5 18429590 18429696 -184655836 + L1PA8A LINE L1 5990 6103 -28 393 226 11 21 chr5 18431081 18431174 -184654358 + L1PA8A LINE L1 6038 6150 -4 222 37 0 0 chr5 18431232 18431259 -184654273 + (CA)n Simple_repeat Simple_repeat 2 28 0 448 163 50 0 chr5 18431260 18431340 -184654192 + L2 LINE L2 3175 3258 -55 853 181 0 0 chr5 18432760 18432893 -184652639 - FLAM_C SINE Alu -10 133 1 2609 62 3 0 chr5 18433511 18433818 -184651714 - AluSp SINE Alu -5 308 1 5010 131 26 33 chr5 18433840 18434679 -184650853 - L1PB4 LINE L1 -7 6149 5317 5787 167 16 104 chr5 18436656 18437020 -184648512 - L1PB4 LINE L1 -1069 5077 4682 237 90 28 0 chr5 18437020 18437059 -184648473 - Alu SINE Alu -11 288 253 5787 167 16 104 chr5 18437059 18437077 -184648455 - L1PB4 LINE L1 -1464 4682 4664 1224 157 104 74 chr5 18437077 18437376 -184648156 - AluSg SINE Alu 0 310 3 5787 167 16 104 chr5 18437376 18437559 -184647973 - L1PB4 LINE L1 -1482 4664 4466 1761 92 4 0 chr5 18437559 18437787 -184647745 - AluY SINE Alu -1 310 82 5787 167 16 104 chr5 18437787 18438133 -184647399 - L1PB4 LINE L1 -1680 4466 4091 2297 113 3 0 chr5 18438133 18438442 -184647090 + AluSx SINE Alu 1 310 -2 5787 167 16 104 chr5 18438442 18439301 -184646231 - L1PB4 LINE L1 -2055 4091 3465 1368 54 12 6 chr5 18439301 18439469 -184646063 - L1MA1 LINE L1 -4 6298 6130 5787 167 16 104 chr5 18439469 18439537 -184645995 - L1PB4 LINE L1 -2681 3465 3393 2251 105 10 3 chr5 18439546 18439842 -184645690 - AluSq SINE Alu -15 298 1 1842 187 56 37 chr5 18439870 18440263 -184645269 + Charlie1b DNA MER1_type 50 455 -2306 2831 178 30 44 chr5 18440263 18440829 -184644703 - MER74A LTR ERVL 0 558 1 1842 187 56 37 chr5 18440829 18440900 -184644632 + Charlie1b DNA MER1_type 455 523 0 348 189 14 27 chr5 18440900 18440972 -184644560 - MLT1I LTR MaLR -16 393 323 336 233 41 0 chr5 18441744 18441817 -184643715 + MIR SINE MIR 3 78 -184 1272 122 0 94 chr5 18443110 18443365 -184642167 - AluSg/x SINE Alu -5 307 77 439 105 0 79 chr5 18443365 18443387 -184642145 - AluSq/x SINE Alu -166 146 124 189 0 0 0 chr5 18443387 18443408 -184642124 + (TA)n Simple_repeat Simple_repeat 1 21 0 439 105 0 79 chr5 18443408 18443461 -184642071 - AluSq/x SINE Alu -188 124 77 1066 57 0 0 chr5 18443499 18443621 -184641911 - AluSg SINE Alu -188 122 1 2588 48 0 16 chr5 18443644 18443957 -184641575 - AluY SINE Alu -3 308 1 442 250 110 22 chr5 18444745 18444881 -184640651 - MIR SINE MIR -37 225 78 760 204 0 58 chr5 18445018 18445169 -184640363 + MLT1A2 LTR MaLR 1 142 -232 1519 170 110 28 chr5 18445169 18445487 -184640045 - MER2 DNA MER2_type 0 344 1 760 204 0 58 chr5 18445487 18445507 -184640025 + MLT1A2 LTR MaLR 142 162 -212 1552 199 33 16 chr5 18445511 18445817 -184639715 + AluJo SINE Alu 1 311 -1 2732 161 14 6 chr5 18445820 18446312 -184639220 + L1MA4 LINE L1 4701 5196 -950 1011 153 153 5 chr5 18446312 18446560 -184638972 + AluJo SINE Alu 73 350 0 2547 139 83 14 chr5 18446563 18447059 -184638473 + L1MA4 LINE L1 5769 6298 -2 1151 210 306 9 chr5 18448964 18449196 -184636336 - Charlie2 DNA MER1_type -290 2572 2410 1621 169 24 0 chr5 18449196 18449444 -184636088 + AluJo SINE Alu 1 254 -58 1151 210 306 9 chr5 18449444 18449783 -184635749 - Charlie2 DNA MER1_type -452 2410 1831 641 245 121 109 chr5 18449825 18450234 -184635298 - Charlie2b DNA MER1_type -2099 683 265 1216 181 67 38 chr5 18450234 18450397 -184635135 - MER33 DNA MER1_type -2261 324 167 1973 149 7 0 chr5 18450397 18450685 -184634847 + AluJb SINE Alu 1 290 -22 1216 181 67 38 chr5 18450685 18450836 -184634696 - MER33 DNA MER1_type -2418 167 1 641 245 121 109 chr5 18450836 18450965 -184634567 - Charlie2b DNA MER1_type -2517 265 139 3311 84 8 61 chr5 18451302 18451780 -184633752 - MLT2A2 LTR ERVL 0 453 1 1415 165 59 87 chr5 18452071 18452428 -184633104 - MLT1A2 LTR MaLR -27 347 1 1026 57 0 0 chr5 18452856 18452979 -184632553 + L1PA8 LINE L1 6050 6172 0 2197 115 0 34 chr5 18453728 18454049 -184631483 + AluSx SINE Alu 1 310 -2 326 186 302 25 chr5 18454128 18454263 -184631269 - Charlie7 DNA MER1_type -35 2577 2481 2200 109 0 7 chr5 18454263 18454557 -184630975 - AluSx SINE Alu -14 298 7 326 186 302 25 chr5 18454557 18454663 -184630869 - Charlie7 DNA MER1_type -131 2481 2269 1783 172 10 0 chr5 18454664 18454955 -184630577 - AluSx SINE Alu -14 298 5 2584 140 45 51 chr5 18454982 18455116 -184630416 - L1MC3 LINE L1 -6 7779 7646 1969 131 10 10 chr5 18455116 18455406 -184630126 - AluJb SINE Alu -11 301 12 2584 140 45 51 chr5 18455406 18455784 -184629748 - L1MC3 LINE L1 -139 7646 7270 1469 203 25 69 chr5 18455784 18455978 -184629554 - ERVL LTR ERVL -2346 3418 3242 1294 176 80 83 chr5 18455978 18456267 -184629265 - AluJo SINE Alu -14 288 1 1469 203 25 69 chr5 18456267 18456392 -184629140 - ERVL LTR ERVL -2522 3242 3113 6072 223 64 12 chr5 18456421 18457204 -184628328 - ERVL LTR ERVL -2769 2995 2254 2177 91 0 49 chr5 18457204 18457512 -184628020 - AluSg SINE Alu -17 293 1 6072 223 64 12 chr5 18457512 18458369 -184627163 - ERVL LTR ERVL -3510 2254 1205 792 158 16 8 chr5 18458374 18458501 -184627031 + ERVL LTR ERVL 2065 2192 -3572 443 252 39 31 chr5 18458498 18458625 -184626907 - ERVL LTR ERVL -4509 1171 1018 * 1710 234 55 7 chr5 18458625 18459065 -184626467 - MLT1C LTR MaLR 0 467 7 295 271 181 65 chr5 18459219 18459544 -184625988 + L2 LINE L2 2599 2961 -353 23 97 0 0 chr5 18460456 18460528 -184625004 + GC_rich Low_complexity Low_complexity 1 72 0 30 27 0 0 chr5 18460556 18460593 -184624939 + GC_rich Low_complexity Low_complexity 1 37 0 329 135 19 0 chr5 18461525 18461577 -184623955 - MSTB LTR MaLR -373 53 1 1781 163 7 7 chr5 18462951 18463245 -184622287 - AluJo SINE Alu -16 296 3 2254 101 0 3 chr5 18464654 18464950 -184620582 + AluSq SINE Alu 1 295 -18 1716 181 7 3 chr5 18465062 18465349 -184620183 + AluJo SINE Alu 1 288 -24 1497 103 48 44 chr5 18465387 18465639 -184619893 - L1MA5A LINE L1 -24 6273 6021 22 35 0 0 chr5 18465943 18465972 -184619560 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr5 18465993 18466021 -184619511 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 18466159 18466182 -184619350 + AT_rich Low_complexity Low_complexity 1 23 0 1196 192 4 4 chr5 18466186 18466415 -184619117 - AluJo SINE Alu -21 291 63 349 212 40 71 chr5 18466890 18466989 -184618543 - MIR3 SINE MIR -23 185 90 393 313 52 57 chr5 18467435 18467646 -184617886 - MIR SINE MIR -45 217 8 299 262 124 34 chr5 18468118 18468385 -184617147 - HAL1 LINE L1 -2060 447 157 2031 102 56 22 chr5 18470000 18470046 -184615486 - HSMAR2 DNA Mariner -2 1300 1257 1909 159 10 0 chr5 18470046 18470348 -184615184 + AluJo SINE Alu 1 305 -7 2031 102 56 22 chr5 18470348 18470625 -184614907 - HSMAR2 DNA Mariner -45 1257 966 1524 101 5 0 chr5 18470618 18470836 -184614696 - HSMAR2 DNA Mariner -1081 221 3 * 876 232 71 5 chr5 18471440 18471638 -184613894 + MER58A DNA MER1_type 4 214 -10 316 304 18 9 chr5 18471662 18471774 -184613758 - L1MEd LINE L1 -5771 348 236 270 256 128 23 chr5 18471905 18471991 -184613541 + L2 LINE L2 3151 3245 -27 22 0 0 0 chr5 18472698 18472720 -184612812 + AT_rich Low_complexity Low_complexity 1 22 0 515 283 66 33 chr5 18472720 18472932 -184612600 + L2 LINE L2 3046 3264 -8 461 270 215 59 chr5 18473484 18474147 -184611385 - L2 LINE L2 -5 3308 2528 235 238 16 0 chr5 18474920 18474983 -184610549 + L2 LINE L2 2484 2547 -767 23 33 0 0 chr5 18475199 18475229 -184610303 + AT_rich Low_complexity Low_complexity 1 30 0 2239 99 0 3 chr5 18476349 18476643 -184608889 + AluSq SINE Alu 1 293 -20 435 81 0 54 chr5 18477838 18477912 -184607620 + L1PA16 LINE L1 6097 6166 0 1099 90 6 6 chr5 18477912 18478068 -184607464 + Tigger1 DNA MER2_type 2083 2238 -180 387 315 81 81 chr5 18478072 18478630 -184606902 + L3 LINE CR1 787 1344 -233 656 137 36 86 chr5 18478709 18478848 -184606684 + FLAM_A SINE Alu 1 132 -1 229 225 0 0 chr5 18479154 18479194 -184606338 + Alu SINE Alu 145 184 -119 25 31 0 0 chr5 18481822 18481854 -184603678 + AT_rich Low_complexity Low_complexity 1 32 0 1114 186 0 29 chr5 18481877 18482087 -184603445 - AluJo SINE Alu -16 296 93 395 270 95 16 chr5 18484003 18484129 -184601403 + L2 LINE L2 3136 3271 -1 467 244 120 49 chr5 18484540 18484765 -184600767 - MIR SINE MIR 0 262 22 2626 189 51 2 chr5 18485904 18486416 -184599116 - MLT1F1 LTR MaLR -29 538 2 3039 158 58 75 chr5 18487242 18488234 -184597298 - L1MB8 LINE L1 -81 6089 5234 23 0 0 0 chr5 18488252 18488275 -184597257 + AT_rich Low_complexity Low_complexity 1 23 0 331 167 0 0 chr5 18489061 18489115 -184596417 - tRNA-Met-e tRNA tRNA -21 54 1 24 0 0 0 chr5 18490830 18490854 -184594678 + AT_rich Low_complexity Low_complexity 1 24 0 219 139 0 0 chr5 18492619 18492655 -184592877 + (TG)n Simple_repeat Simple_repeat 2 37 0 2067 115 3 0 chr5 18492762 18493049 -184592483 - AluSx SINE Alu -24 288 1 197 259 155 0 chr5 18494366 18494424 -184591108 + MIR SINE MIR 176 242 -20 239 296 126 37 chr5 18494460 18494595 -184590937 + MIR SINE MIR 46 192 -70 284 252 184 27 chr5 18495590 18495737 -184589795 - L1MC/D LINE L1 -2322 5486 5317 217 235 92 51 chr5 18496007 18496105 -184589427 - L2 LINE L2 -3 3269 3168 260 279 0 36 chr5 18496132 18496272 -184589260 + C-rich Low_complexity Low_complexity 4 138 0 266 286 14 0 chr5 18497496 18497566 -184587966 - MER91 DNA MER1_type -3 137 67 220 256 22 89 chr5 18497881 18497971 -184587561 - L2 LINE L2 -1005 2309 2226 199 320 72 21 chr5 18498634 18498731 -184586801 - MIR SINE MIR -69 139 38 351 0 0 0 chr5 18498897 18498936 -184586596 + (A)n Simple_repeat Simple_repeat 1 39 0 2353 75 0 3 chr5 18499622 18499928 -184585604 + AluSc SINE Alu 1 305 -4 193 283 65 22 chr5 18500007 18500099 -184585433 + L3 LINE CR1 1043 1138 -439 842 160 0 0 chr5 18500600 18500731 -184584801 - FLAM_A SINE Alu -2 131 1 365 225 36 36 chr5 18500954 18501065 -184584467 - MIR3 SINE MIR -1 207 97 2116 117 0 3 chr5 18504468 18504766 -184580766 - AluSq SINE Alu -16 297 1 27 29 0 0 chr5 18505469 18505503 -184580029 + AT_rich Low_complexity Low_complexity 1 34 0 187 139 0 0 chr5 18507067 18507103 -184578429 - L2 LINE L2 -24 3248 3213 1085 294 256 15 chr5 18507180 18508345 -184577187 + L2 LINE L2 463 1908 -1406 2175 99 7 3 chr5 18510701 18511003 -184574529 - AluSq SINE Alu -10 303 1 315 316 37 15 chr5 18511598 18511734 -184573798 - L1ME1 LINE L1 -18 6148 6010 1792 122 37 0 chr5 18511793 18512091 -184573441 + AluSx SINE Alu 2 309 0 2912 248 163 73 chr5 18512923 18513282 -184572250 + HAL1 LINE L1 117 443 -2064 1423 158 8 0 chr5 18513282 18513516 -184572016 - MER46A DNA MER2_type 0 236 1 2912 248 163 73 chr5 18513516 18514102 -184571430 + HAL1 LINE L1 443 975 -1532 1909 104 3 31 chr5 18514102 18514390 -184571142 + AluSp SINE Alu 2 281 -32 2912 248 163 73 chr5 18514390 18515257 -184570275 + HAL1 LINE L1 975 2092 -415 2469 56 3 0 chr5 18517222 18517527 -184568005 + AluY SINE Alu 1 306 -5 3804 216 92 20 chr5 18517944 18518944 -184566588 + L1MC3 LINE L1 6702 7773 -12 1371 166 109 7 chr5 18518955 18519238 -184566294 + AluJo SINE Alu 1 312 0 2047 130 3 0 chr5 18519610 18519911 -184565621 + AluSp SINE Alu 3 304 -9 245 310 82 6 chr5 18520706 18520864 -184564668 + MIR SINE MIR 16 185 -77 181 244 67 0 chr5 18520875 18520920 -184564612 + MER5C DNA MER1_type 31 78 -246 337 191 148 26 chr5 18521206 18521321 -184564211 + L1ME4a LINE L1 5990 6118 -3 1516 91 0 0 chr5 18521323 18521521 -184564011 - AluSc SINE Alu -16 293 96 290 287 30 0 chr5 18521889 18521990 -184563542 - L2 LINE L2 -491 2823 2720 561 204 116 33 chr5 18523273 18523454 -184562078 + L1MB2 LINE L1 5976 6171 0 389 255 161 21 chr5 18523723 18523915 -184561617 - MIR SINE MIR -23 239 21 2140 89 10 0 chr5 18524628 18524921 -184560611 - AluSx SINE Alu -12 300 5 991 81 7 0 chr5 18524923 18525059 -184560473 - AluSq/x SINE Alu -175 137 1 480 363 11 6 chr5 18528244 18528426 -184557106 - MIR SINE MIR -74 188 6 1782 154 173 23 chr5 18529657 18530083 -184555449 + LTR10A LTR ERV1 13 548 -61 458 100 0 0 chr5 18530764 18530834 -184554698 + L1MA3 LINE L1 6236 6305 0 1549 195 160 15 chr5 18531069 18531475 -184554057 - MLT1C LTR MaLR -2 465 1 288 0 0 0 chr5 18531579 18531611 -184553921 + (T)n Simple_repeat Simple_repeat 1 32 0 205 228 11 54 chr5 18532196 18532288 -184553244 + CT-rich Low_complexity Low_complexity 2 89 0 272 254 0 0 chr5 18532312 18532367 -184553165 + MER91A DNA MER1_type 1 55 -141 531 132 211 44 chr5 18534219 18534333 -184551199 + FLAM_C SINE Alu 1 133 0 215 360 81 0 chr5 18534512 18534623 -184550909 - L2 LINE L2 -21 3251 3132 2223 112 0 0 chr5 18534707 18535012 -184550520 + AluSx SINE Alu 1 305 -7 301 222 148 64 chr5 18535243 18535428 -184550104 + MIR3 SINE MIR 14 202 -6 180 176 0 0 chr5 18541859 18541893 -184543639 + CT-rich Low_complexity Low_complexity 2 35 0 3654 63 21 7 chr5 18541900 18542414 -184543118 - LTR8 LTR ERV1 -104 587 1 570 79 40 0 chr5 18542414 18542490 -184543042 - HUERS-P1 LTR ERV1 0 6263 6185 204 238 32 32 chr5 18542493 18542556 -184542976 - MIR SINE MIR -196 66 4 1506 147 77 25 chr5 18542870 18543155 -184542377 + AluJo SINE Alu 1 300 -12 286 337 151 35 chr5 18543387 18543586 -184541946 + MIR SINE MIR 34 255 -7 406 310 70 0 chr5 18544405 18544534 -184540998 + MIR3 SINE MIR 24 161 -47 182 234 43 0 chr5 18545936 18545983 -184539549 + L2 LINE L2 2995 3043 -229 1543 190 7 7 chr5 18547598 18547888 -184537644 + AluJo SINE Alu 1 290 -22 549 336 184 16 chr5 18548325 18548831 -184536701 - L2 LINE L2 -1366 1948 1358 216 0 0 0 chr5 18549368 18549392 -184536140 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2014 109 53 0 chr5 18550366 18550651 -184534881 + AluSq SINE Alu 1 300 -13 234 271 57 0 chr5 18550662 18550732 -184534800 - L3 LINE CR1 -23 1554 1481 226 79 53 0 chr5 18551263 18551301 -184534231 - L2 LINE L2 -2 3311 3272 35 0 0 0 chr5 18552986 18553021 -184532511 + AT_rich Low_complexity Low_complexity 1 35 0 3169 186 55 2 chr5 18553386 18554019 -184531513 + L1MB3 LINE L1 5517 6183 0 286 331 8 8 chr5 18554543 18554676 -184530856 - L1ME LINE L1 -355 5766 5634 184 245 61 0 chr5 18554841 18554890 -184530642 + L2 LINE L2 3221 3272 0 1807 164 3 22 chr5 18555040 18555352 -184530180 + AluJo SINE Alu 1 306 -6 540 176 0 0 chr5 18555353 18555455 -184530077 + GA-rich Low_complexity Low_complexity 5 106 0 2646 172 15 13 chr5 18556428 18556894 -184528638 + MLT1C LTR MaLR 1 467 0 773 238 144 61 chr5 18557054 18557335 -184528197 + LTR56 LTR ERV1 1 328 -117 2188 100 3 7 chr5 18557335 18557636 -184527896 - AluSx SINE Alu -12 300 1 773 238 144 61 chr5 18557636 18557765 -184527767 + LTR56 LTR ERV1 328 445 0 193 343 82 0 chr5 18558951 18559024 -184526508 - L2 LINE L2 -9 3263 3185 1947 120 40 0 chr5 18559380 18559680 -184525852 + AluSx SINE Alu 1 312 0 1743 249 55 38 chr5 18559685 18560212 -184525320 + MLT1H LTR MaLR 1 536 -13 1740 170 0 14 chr5 18561683 18561995 -184523537 + AluJo SINE Alu 1 308 0 29 28 0 0 chr5 18563060 18563096 -184522436 + AT_rich Low_complexity Low_complexity 1 36 0 186 103 0 0 chr5 18565198 18565227 -184520305 + (TG)n Simple_repeat Simple_repeat 1 29 0 1097 138 20 26 chr5 18565709 18565904 -184519628 - L1MC1 LINE L1 0 6333 6140 1691 90 65 29 chr5 18565906 18566185 -184519347 - Tigger7 DNA MER2_type 0 2487 2199 996 207 6 0 chr5 18566174 18566348 -184519184 - Tigger7 DNA MER2_type -2312 175 1 * 481 130 0 26 chr5 18566353 18566430 -184519102 - L1MC1 LINE L1 -194 6139 6065 610 91 0 0 chr5 18566855 18566932 -184518600 + LTR32 LTR ERVL 12 88 -383 272 170 0 57 chr5 18566912 18566965 -184518567 + LTR32 LTR ERVL 15 64 -407 * 1153 132 21 32 chr5 18566979 18567168 -184518364 + LTR32 LTR ERVL 285 471 0 2072 125 23 0 chr5 18567212 18567517 -184518015 + AluSx SINE Alu 1 312 0 368 177 35 71 chr5 18567534 18567647 -184517885 - MER104 DNA Tc2 -66 114 6 964 246 56 59 chr5 18568300 18568691 -184516841 + LTR16A1 LTR ERVL 1 390 -67 231 36 0 0 chr5 18568924 18568952 -184516580 + (T)n Simple_repeat Simple_repeat 1 28 0 307 316 11 11 chr5 18569144 18569239 -184516293 + MIR SINE MIR 20 114 -148 336 226 69 29 chr5 18569314 18569416 -184516116 + L2 LINE L2 3208 3313 0 1103 118 0 0 chr5 18570018 18570179 -184515353 - AluSg/x SINE Alu -19 291 131 534 205 67 80 chr5 18570221 18570445 -184515087 + L2 LINE L2 3092 3312 -1 683 136 10 0 chr5 18570516 18570619 -184514913 - MER44D DNA MER2_type -9 596 493 1442 144 4 61 chr5 18570631 18570909 -184514623 - AluJo SINE Alu -14 298 37 1152 96 126 0 chr5 18570910 18571108 -184514424 - MER44D DNA MER2_type -115 494 2 758 261 131 97 chr5 18571148 18572071 -184513461 - L2 LINE L2 -254 3059 2120 2113 112 0 10 chr5 18572573 18572885 -184512647 + AluSq SINE Alu 1 309 -4 438 346 120 37 chr5 18573979 18574976 -184510556 + L2 LINE L2 685 1764 -1550 276 371 21 14 chr5 18575045 18575188 -184510344 + L2 LINE L2 3122 3265 -7 2082 125 7 0 chr5 18575834 18576137 -184509395 + AluSx SINE Alu 1 305 -7 583 272 161 27 chr5 18577816 18578040 -184507492 - MIR SINE MIR -6 256 3 392 0 21 0 chr5 18578863 18578911 -184506621 + (CA)n Simple_repeat Simple_repeat 2 50 0 203 333 23 0 chr5 18579789 18579876 -184505656 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 18580796 18581200 -184504332 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 18581346 18581642 -184503890 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 18581820 18581982 -184503550 + L1ME4a LINE L1 4456 4615 -1531 501 293 84 73 chr5 18582147 18582605 -184502927 + L1ME4a LINE L1 5374 5844 -277 2438 93 0 0 chr5 18582605 18582906 -184502626 + AluSx SINE Alu 1 301 -11 501 293 84 73 chr5 18582906 18583094 -184502438 + L1ME4a LINE L1 5844 6028 -93 2227 101 3 3 chr5 18584519 18584807 -184500725 + AluSx SINE Alu 1 288 -24 1921 133 7 0 chr5 18585304 18585582 -184499950 - AluSx SINE Alu -32 280 1 1880 148 0 7 chr5 18586204 18586482 -184499050 - AluSx SINE Alu -36 276 1 229 356 28 34 chr5 18586512 18586689 -184498843 - MIR SINE MIR -30 232 57 191 244 0 0 chr5 18587444 18587485 -184498047 - L2 LINE L2 -19 3253 3213 2228 95 0 7 chr5 18588265 18588548 -184496984 + AluSq SINE Alu 1 281 -32 742 106 7 7 chr5 18588548 18588699 -184496833 + (TA)n Simple_repeat Simple_repeat 2 152 0 2012 128 3 33 chr5 18591139 18591444 -184494088 + AluSx SINE Alu 1 296 -16 15377 121 22 10 chr5 18594077 18596291 -184489241 + Tigger1 DNA MER2_type 58 2302 -116 1938 166 7 3 chr5 18596291 18596598 -184488934 - AluJo SINE Alu -4 308 1 15377 121 22 10 chr5 18596598 18596716 -184488816 + Tigger1 DNA MER2_type 2302 2417 -1 242 299 174 12 chr5 18597394 18597561 -184487971 - MER112 DNA MER1_type -35 225 32 319 349 105 33 chr5 18597652 18598203 -184487329 + L2 LINE L2 2242 2832 -482 258 143 0 0 chr5 18598445 18598487 -184487045 + L2 LINE L2 3265 3306 -7 299 235 53 46 chr5 18598590 18598767 -184486765 - MER112 DNA MER1_type 0 260 2 2133 144 0 6 chr5 18598839 18599152 -184486380 - AluSx SINE Alu -1 311 1 2318 96 0 0 chr5 18599475 18599768 -184485764 - AluSq SINE Alu -20 293 1 232 219 14 41 chr5 18599771 18599844 -184485688 - MIR SINE MIR -116 146 76 1326 77 6 0 chr5 18600560 18600729 -184484803 + MLT2A1 LTR ERVL 1 170 -274 1251 163 75 3 chr5 18601694 18601989 -184483543 + MER33 DNA MER1_type 5 320 -4 2284 63 42 3 chr5 18602358 18602644 -184482888 + AluY SINE Alu 1 297 -14 411 38 0 0 chr5 18603945 18603998 -184481534 + (TG)n Simple_repeat Simple_repeat 1 53 0 437 213 46 0 chr5 18604280 18604388 -184481144 - MER81 DNA DNA -1 113 1 483 279 82 0 chr5 18607574 18607721 -184477811 + MIR SINE MIR 13 171 -91 2217 107 7 7 chr5 18607938 18608236 -184477296 + AluSx SINE Alu 1 298 -14 452 250 14 21 chr5 18608259 18608403 -184477129 + MIR SINE MIR 114 256 -6 15210 40 12 0 chr5 18609117 18611711 -184473821 + L1PA5 LINE L1 3552 6151 -3 917 62 0 23 chr5 18611712 18611840 -184473692 + L1PA4 LINE L1 6031 6155 0 29 28 0 0 chr5 18611840 18611876 -184473656 + AT_rich Low_complexity Low_complexity 1 36 0 203 333 23 0 chr5 18612764 18612851 -184472681 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 18613771 18614175 -184471357 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 18614321 18614617 -184470915 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 18614795 18614957 -184470575 + L1ME4a LINE L1 4456 4615 -1531 504 293 84 73 chr5 18615123 18615581 -184469951 + L1ME4a LINE L1 5374 5844 -277 2427 96 0 0 chr5 18615581 18615882 -184469650 + AluSx SINE Alu 1 301 -11 504 293 84 73 chr5 18615882 18616070 -184469462 + L1ME4a LINE L1 5844 6028 -93 2082 113 17 7 chr5 18617497 18617797 -184467735 + AluSx SINE Alu 1 303 -9 2049 113 14 0 chr5 18618636 18618911 -184466621 + AluSx SINE Alu 1 279 -33 391 0 0 0 chr5 18618911 18618953 -184466579 + LTR17 LTR ERV1 1 42 -738 2040 98 4 4 chr5 18619114 18619378 -184466154 - AluSq SINE Alu -49 264 1 329 193 211 26 chr5 18619747 18619861 -184465671 - AluJo SINE Alu -163 139 5 258 213 7 37 chr5 18620251 18620387 -184465145 + CT-rich Low_complexity Low_complexity 1 132 0 398 136 53 24 chr5 18620409 18620578 -184464954 + CT-rich Low_complexity Low_complexity 2 175 0 193 232 33 20 chr5 18620554 18620705 -184464827 + T-rich Low_complexity Low_complexity 5 157 0 * 372 73 0 18 chr5 18620769 18620824 -184464708 + MLT2A2 LTR ERVL 400 453 0 2194 132 0 0 chr5 18622350 18622653 -184462879 - AluSx SINE Alu -7 305 3 382 196 131 65 chr5 18623341 18623494 -184462038 - L1ME4a LINE L1 -3 6118 5956 900 97 0 0 chr5 18623723 18623837 -184461695 + AluJb SINE Alu 1 114 -198 6771 11 0 1 chr5 18623839 18624589 -184460943 + L1HS LINE L1 5407 6155 0 207 188 0 0 chr5 18624589 18624637 -184460895 + A-rich Low_complexity Low_complexity 1 48 0 892 170 31 6 chr5 18624638 18624797 -184460735 + AluJb SINE Alu 122 284 -28 2261 97 3 7 chr5 18625401 18625699 -184459833 - AluSq SINE Alu -16 297 1 216 67 0 0 chr5 18627358 18627388 -184458144 + (A)n Simple_repeat Simple_repeat 1 30 0 1020 113 113 87 chr5 18627758 18627988 -184457544 + MER31B LTR ERV1 1 236 -230 349 130 0 43 chr5 18627973 18628042 -184457490 + MER31B LTR ERV1 401 466 0 * 1593 187 0 4 chr5 18628231 18628493 -184457039 + AluJo SINE Alu 33 293 -19 217 245 235 20 chr5 18629456 18629554 -184455978 + L2 LINE L2 3137 3255 -17 1801 150 14 31 chr5 18629559 18629852 -184455680 + AluJo SINE Alu 1 288 -24 202 260 91 26 chr5 18631487 18631564 -184453968 + MIR3 SINE MIR 89 170 -38 21 0 0 0 chr5 18632211 18632232 -184453300 + AT_rich Low_complexity Low_complexity 1 21 0 1380 142 0 39 chr5 18633108 18633341 -184452191 + AluSg/x SINE Alu 86 309 0 2442 90 0 10 chr5 18633605 18633916 -184451616 + AluSq SINE Alu 1 308 -5 1736 181 0 0 chr5 18634830 18635141 -184450391 + AluJb SINE Alu 1 311 0 351 0 0 0 chr5 18635147 18635186 -184450346 + (CA)n Simple_repeat Simple_repeat 2 40 0 1788 156 125 51 chr5 18635599 18636030 -184449502 - MER31B LTR ERV1 -3 463 1 1790 158 10 10 chr5 18636062 18636359 -184449173 + AluJb SINE Alu 1 297 -15 1232 160 78 3 chr5 18637347 18637641 -184447891 + MER33 DNA MER1_type 5 320 -4 2324 60 42 0 chr5 18638010 18638293 -184447239 + AluY SINE Alu 1 295 -16 2189 124 0 10 chr5 18638890 18639197 -184446335 + AluSx SINE Alu 1 304 -8 2163 141 0 3 chr5 18640592 18640898 -184444634 - AluJb SINE Alu -7 305 1 328 242 11 22 chr5 18641713 18641804 -184443728 + MIR SINE MIR 108 197 -65 665 217 104 64 chr5 18642068 18642317 -184443215 + MLT1J2 LTR MaLR 21 279 -171 445 284 83 54 chr5 18642471 18642675 -184442857 - MIR SINE MIR -41 221 12 1755 111 15 114 chr5 18643455 18643805 -184441727 + AluSp SINE Alu 1 313 0 216 158 0 0 chr5 18643806 18643844 -184441688 + T-rich Low_complexity Low_complexity 3 40 0 2292 98 3 3 chr5 18644150 18644455 -184441077 + AluSg SINE Alu 1 305 -5 375 41 0 0 chr5 18645756 18645805 -184439727 + (TG)n Simple_repeat Simple_repeat 1 49 0 437 213 46 0 chr5 18646087 18646195 -184439337 - MER81 DNA DNA -1 113 1 464 274 89 0 chr5 18649381 18649527 -184436005 + MIR SINE MIR 13 171 -91 2217 107 7 7 chr5 18649744 18650042 -184435490 + AluSx SINE Alu 1 298 -14 477 255 7 21 chr5 18650065 18650210 -184435322 + MIR SINE MIR 114 256 -6 15320 39 12 0 chr5 18650924 18653518 -184432014 + L1PA5 LINE L1 3552 6151 -3 947 55 0 23 chr5 18653519 18653647 -184431885 + L1PA4 LINE L1 6031 6155 0 29 28 0 0 chr5 18653647 18653683 -184431849 + AT_rich Low_complexity Low_complexity 1 36 0 1782 175 14 20 chr5 18656498 18656541 -184428991 - L1MB3 LINE L1 0 6183 6141 2155 140 0 0 chr5 18656541 18656841 -184428691 - AluSx SINE Alu -11 301 2 1782 175 14 20 chr5 18656841 18657152 -184428380 - L1MB3 LINE L1 -42 6141 5831 2092 151 3 0 chr5 18658416 18658721 -184426811 - AluSx SINE Alu -6 306 1 180 0 0 0 chr5 18658795 18658815 -184426717 + (A)n Simple_repeat Simple_repeat 1 20 0 192 77 0 0 chr5 18660590 18660616 -184424916 + (TA)n Simple_repeat Simple_repeat 2 27 0 2447 89 0 10 chr5 18661092 18661405 -184424127 - AluSq SINE Alu -3 310 1 1894 144 6 51 chr5 18661958 18662271 -184423261 + AluSx SINE Alu 1 299 -13 2035 116 14 0 chr5 18663109 18663384 -184422148 + AluSx SINE Alu 1 279 -33 4971 92 10 34 chr5 18663384 18664110 -184421422 + LTR17 LTR ERV1 1 708 -72 1285 77 0 12 chr5 18664192 18664362 -184421170 - LTR17 LTR ERV1 -612 168 1 1930 168 7 0 chr5 18667248 18667546 -184417986 + AluJo SINE Alu 1 300 -12 577 109 0 20 chr5 18667766 18667867 -184417665 - L1PA13 LINE L1 -5 6158 6060 1953 163 0 3 chr5 18668542 18668837 -184416695 + AluJb SINE Alu 1 294 -18 435 110 0 0 chr5 18668906 18668979 -184416553 - AluSp/q SINE Alu -6 307 235 1665 131 55 70 chr5 18669646 18669958 -184415574 + AluJo SINE Alu 1 307 -5 206 360 93 22 chr5 18670048 18670370 -184415162 + L2 LINE L2 2560 2904 -410 288 310 108 8 chr5 18670546 18670675 -184414857 + L2 LINE L2 3172 3313 0 228 67 0 0 chr5 18671080 18671110 -184414422 + (A)n Simple_repeat Simple_repeat 1 30 0 607 128 4 25 chr5 18671282 18671519 -184414013 + AluJ SINE Alu 1 312 0 263 247 104 0 chr5 18671661 18671738 -184413794 - MIR SINE MIR -113 149 65 2266 105 16 10 chr5 18672622 18672926 -184412606 + AluSq SINE Alu 2 307 -6 390 245 93 0 chr5 18673205 18673344 -184412188 + L1ME2 LINE L1 5648 5799 -322 1200 108 154 0 chr5 18673393 18673588 -184411944 - L1PB2 LINE L1 -2 6149 5925 2033 118 0 4 chr5 18673683 18674018 -184411514 + AluSg SINE Alu 2 335 0 1928 177 67 10 chr5 18674262 18674652 -184410880 - L1MB4 LINE L1 0 6180 5769 604 181 78 42 chr5 18674896 18675062 -184410470 + L1ME2 LINE L1 5963 6134 -30 293 175 0 0 chr5 18676010 18676067 -184409465 - AluSq SINE Alu 0 301 245 1984 97 19 0 chr5 18676072 18676329 -184409203 - AluSq SINE Alu -51 262 1 2203 120 7 0 chr5 18677205 18677505 -184408027 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr5 18678464 18678485 -184407047 + AT_rich Low_complexity Low_complexity 1 21 0 1744 177 10 0 chr5 18679183 18679482 -184406050 + AluJo SINE Alu 1 302 -10 209 316 10 20 chr5 18680099 18680197 -184405335 + (CATA)n Simple_repeat Simple_repeat 4 100 0 * 359 255 115 67 chr5 18680186 18680229 -184405303 + L1ME4a LINE L1 5902 5941 -180 2317 87 3 0 chr5 18680229 18680517 -184405015 + AluSp SINE Alu 1 289 -24 30 27 0 0 chr5 18680517 18680554 -184404978 + AT_rich Low_complexity Low_complexity 1 37 0 359 255 115 67 chr5 18680554 18680681 -184404851 + L1ME4a LINE L1 5940 6119 -2 1779 88 4 0 chr5 18681314 18681553 -184403979 - AluSq SINE Alu -72 241 2 1801 132 55 0 chr5 18682138 18682427 -184403105 + AluJb SINE Alu 1 305 -7 331 240 0 37 chr5 18682520 18682666 -184402866 + MIR SINE MIR 49 260 -2 2384 15 0 0 chr5 18682803 18683071 -184402461 - AluYb8 SINE Alu -14 304 37 1830 124 3 58 chr5 18683627 18683957 -184401575 - AluSx SINE Alu 0 312 1 651 79 0 264 chr5 18683957 18684135 -184401397 - AluJo/FLAM SINE Alu -171 131 1 336 175 0 0 chr5 18686008 18686071 -184399461 + A-rich Low_complexity Low_complexity 1 63 0 33 80 0 0 chr5 18686768 18686843 -184398689 + GC_rich Low_complexity Low_complexity 1 75 0 1960 184 126 2 chr5 18688402 18688816 -184396716 - L1MB5 LINE L1 0 6174 5710 22 0 0 0 chr5 18689216 18689238 -184396294 + AT_rich Low_complexity Low_complexity 1 22 0 383 226 68 9 chr5 18689362 18689480 -184396052 - MLT1J2 LTR MaLR -278 233 70 795 296 61 20 chr5 18689720 18690496 -184395036 + HERV16 LTR ERVL 1607 2433 -2563 1099 229 66 104 chr5 18691723 18692157 -184393375 - MLT1D LTR MaLR 0 505 43 700 170 23 53 chr5 18692260 18692431 -184393101 - L1MB1 LINE L1 -66 6102 5937 2069 102 0 23 chr5 18692484 18692787 -184392745 + AluSx SINE Alu 1 296 -16 444 155 0 155 chr5 18693169 18693440 -184392092 - AluJo SINE Alu -80 232 4 262 229 0 0 chr5 18694079 18694127 -184391405 + MIR3 SINE MIR 112 159 -49 185 207 183 24 chr5 18695553 18695635 -184389897 - MIR SINE MIR -60 148 54 2328 82 0 0 chr5 18695712 18696016 -184389516 + AluY SINE Alu 2 305 -6 2064 163 34 11 chr5 18696587 18696944 -184388588 + MLT1A1 LTR MaLR 1 365 0 189 278 0 19 chr5 18697039 18697093 -184388439 - MIR3 SINE MIR -5 203 151 2011 95 7 3 chr5 18698441 18698749 -184386783 - AluSp SINE Alu 0 309 1 650 200 50 22 chr5 18698953 18699133 -184386399 - MER5A DNA MER1_type -1 188 4 3172 29 19 9 chr5 18699492 18699973 -184385559 + L1P2 LINE L1 5185 5670 -485 4244 127 34 0 chr5 18700121 18700805 -184384727 - L1PA13 LINE L1 -146 6017 5311 1883 102 0 0 chr5 18702055 18702310 -184383222 - AluSx SINE Alu -57 255 1 500 282 56 49 chr5 18702313 18702597 -184382935 + HAL1 LINE L1 352 637 -1870 451 276 283 14 chr5 18703112 18703554 -184381978 + L2 LINE L2 233 793 -2521 2200 88 13 3 chr5 18703570 18703877 -184381655 - AluY SINE Alu -1 310 1 1204 182 84 65 chr5 18704421 18704729 -184380803 + MLT2B1 LTR ERVL 206 519 -1 2167 67 21 3 chr5 18704878 18705160 -184380372 + L1PA5 LINE L1 5866 6152 -2 1079 218 45 73 chr5 18705329 18705567 -184379965 + L1ME2 LINE L1 5662 5884 -280 1925 95 4 0 chr5 18705567 18705831 -184379701 + AluSx SINE Alu 35 299 -13 1079 218 45 73 chr5 18705831 18706033 -184379499 + L1ME2 LINE L1 5884 6090 -74 210 347 0 20 chr5 18706446 18706544 -184378988 + GA-rich Low_complexity Low_complexity 2 97 0 196 280 90 80 chr5 18706839 18706939 -184378593 - MER5A DNA MER1_type -35 154 54 * 244 224 20 0 chr5 18706927 18706976 -184378556 - L2 LINE L2 -7 3306 3257 354 308 75 0 chr5 18707320 18707479 -184378053 + MER112 DNA MER1_type 74 244 -16 2108 108 3 0 chr5 18710083 18710380 -184375152 - AluSx SINE Alu -13 299 2 2382 78 3 0 chr5 18710769 18711077 -184374455 + AluSc SINE Alu 1 309 0 1613 166 38 3 chr5 18711960 18712250 -184373282 + AluJo SINE Alu 5 304 -8 1972 123 17 0 chr5 18713409 18713702 -184371830 + AluSx SINE Alu 5 302 -10 2250 160 59 7 chr5 18714146 18714552 -184370980 + MSTA LTR MaLR 1 427 -1 280 216 62 21 chr5 18715334 18715431 -184370101 + MER104 DNA Tc2 35 135 -45 28 48 0 0 chr5 18715724 18715766 -184369766 + AT_rich Low_complexity Low_complexity 1 42 0 1178 128 57 18 chr5 18715859 18716086 -184369446 - L1PB1 LINE L1 -2 6149 5914 261 177 108 54 chr5 18716312 18716442 -184369090 + MLT1F LTR MaLR 189 325 -217 194 350 100 0 chr5 18716537 18716657 -184368875 + L2 LINE L2 2287 2418 -896 1621 178 69 72 chr5 18716682 18717049 -184368483 + MLT2D LTR ERVL 2 369 -45 416 19 0 19 chr5 18717049 18717103 -184368429 + (CA)n Simple_repeat Simple_repeat 1 53 0 1621 178 69 72 chr5 18717103 18717139 -184368393 + MLT2D LTR ERVL 369 404 -10 183 156 0 0 chr5 18718135 18718167 -184367365 + (TG)n Simple_repeat Simple_repeat 2 33 0 345 318 74 42 chr5 18718351 18718568 -184366964 + L2 LINE L2 3045 3268 -4 800 252 102 15 chr5 18720172 18720446 -184365086 - MLT1H LTR MaLR -243 306 9 1581 176 89 35 chr5 18720521 18720925 -184364607 + MSTB LTR MaLR 1 426 0 408 174 62 104 chr5 18721213 18721357 -184364175 + MLT1J LTR MaLR 1 138 -373 714 248 207 51 chr5 18721357 18721865 -184363667 + MLT1G LTR MaLR 1 587 -3 228 275 145 15 chr5 18721868 18721999 -184363533 + MLT1G-int LTR MaLR 2 149 -1222 1048 227 59 18 chr5 18722504 18722790 -184362742 - LTR16C LTR ERVL 0 491 194 1958 240 45 6 chr5 18722993 18723509 -184362023 + MER82 DNA MER2_type 1 536 -117 2063 124 3 0 chr5 18723958 18724256 -184361276 + AluSx SINE Alu 1 299 -13 1701 130 10 33 chr5 18725176 18725476 -184360056 - AluSx SINE Alu -12 300 8 357 93 0 0 chr5 18725679 18725733 -184359799 + Alu SINE Alu 247 300 0 7137 43 28 0 chr5 18725902 18727451 -184358081 - L1PA4 LINE L1 -18 6137 4563 1969 106 57 0 chr5 18728248 18728531 -184357001 - AluSg SINE Alu -11 299 1 557 239 14 7 chr5 18728731 18728873 -184356659 - L2 LINE L2 -319 2994 2852 1926 202 14 11 chr5 18729804 18730165 -184355367 + MLT1A1 LTR MaLR 1 362 -3 1892 125 17 3 chr5 18731130 18731426 -184354106 - AluSx SINE Alu -12 300 1 1613 153 28 10 chr5 18731649 18731937 -184353595 + AluSp SINE Alu 1 293 -20 21 57 0 0 chr5 18731972 18732007 -184353525 + AT_rich Low_complexity Low_complexity 1 35 0 16168 55 24 4 chr5 18732557 18734683 -184350849 + L1P LINE L1 593 2760 -3386 2777 146 24 0 chr5 18736291 18736744 -184348788 - L1MC2 LINE L1 -234 6110 5647 276 292 219 28 chr5 18736760 18737182 -184348350 - L3 LINE CR1 -608 969 423 323 275 22 11 chr5 18737639 18737730 -184347802 - MER45C DNA AcHobo -378 575 484 881 301 127 29 chr5 18737920 18738164 -184347368 + L2 LINE L2 2425 2644 -669 1793 152 10 3 chr5 18738164 18738467 -184347065 + AluSx SINE Alu 1 305 -7 881 301 127 29 chr5 18738467 18738781 -184346751 + L2 LINE L2 2644 3035 -278 7369 71 8 15 chr5 18738783 18739770 -184345762 + L1P LINE L1 1 980 -5166 23 68 0 0 chr5 18739954 18739998 -184345534 + AT_rich Low_complexity Low_complexity 1 44 0 912 134 6 137 chr5 18739999 18740313 -184345219 - AluSx SINE Alu -28 284 12 22 35 0 0 chr5 18740847 18740876 -184344656 + AT_rich Low_complexity Low_complexity 1 29 0 189 237 0 0 chr5 18741192 18741230 -184344302 + L3 LINE CR1 925 962 -615 1104 32 0 0 chr5 18741539 18741684 -184343848 + L1PA10 LINE L1 6025 6169 0 382 18 36 0 chr5 18741944 18741999 -184343533 + (TG)n Simple_repeat Simple_repeat 2 58 0 1024 192 42 9 chr5 18742086 18742300 -184343232 + MER45C DNA AcHobo 3 223 -730 1309 174 15 104 chr5 18742490 18742817 -184342715 - AluJb SINE Alu -4 298 1 208 272 97 29 chr5 18743135 18743238 -184342294 - L2 LINE L2 -238 3034 2925 557 271 133 57 chr5 18743268 18743688 -184341844 - L2 LINE L2 -5 3267 2816 402 266 87 52 chr5 18744372 18744545 -184340987 - MIR SINE MIR -6 256 78 1177 254 38 83 chr5 18745258 18745744 -184339788 - L1MC5 LINE L1 -516 7445 6993 2261 127 30 25 chr5 18745744 18746105 -184339427 + THE1B LTR MaLR 1 363 -1 1177 254 38 83 chr5 18746105 18746253 -184339279 - L1MC5 LINE L1 -968 6993 6840 484 236 139 6 chr5 18746665 18746830 -184338702 - L3 LINE CR1 -7 1570 1384 469 309 115 20 chr5 18746871 18747166 -184338366 - L2 LINE L2 -37 3235 2913 591 242 129 0 chr5 18747288 18747482 -184338050 - MIR SINE MIR -37 225 7 2105 86 38 0 chr5 18749705 18749996 -184335536 - AluY SINE Alu -9 302 1 711 219 62 21 chr5 18750300 18750492 -184335040 - MER58A DNA MER1_type -3 221 22 13769 34 16 7 chr5 18750636 18752394 -184333138 - L1P LINE L1 -1550 4596 2822 739 259 28 53 chr5 18752668 18752915 -184332617 - MLT1F1 LTR MaLR -326 241 1 343 276 42 121 chr5 18752928 18753283 -184332249 - MLT1F1-int LTR MaLR -16 1355 1029 2037 129 3 0 chr5 18753612 18753907 -184331625 + AluSx SINE Alu 1 296 -16 226 191 11 85 chr5 18754369 18754463 -184331069 - HsTC2 DNA Tc2 -1811 87 1 479 236 9 9 chr5 18755059 18755165 -184330367 + MER94 DNA DNA 9 114 -20 1790 194 23 127 chr5 18755904 18756511 -184329021 + MER21B LTR ERV1 1 544 -319 1392 181 4 11 chr5 18756514 18756790 -184328742 + AluJo SINE Alu 1 274 -38 229 101 11 79 chr5 18756793 18756882 -184328650 + (TG)n Simple_repeat Simple_repeat 2 84 0 1021 242 125 45 chr5 18757732 18758181 -184327351 + L1MC4 LINE L1 6505 6924 -884 1163 155 5 23 chr5 18758198 18758417 -184327115 + AluJb SINE Alu 83 297 -15 770 304 117 50 chr5 18758422 18758822 -184326710 + L1MC4 LINE L1 7107 7479 -563 1914 139 0 3 chr5 18758822 18759123 -184326409 - AluSq SINE Alu -13 300 1 1822 129 61 0 chr5 18759123 18759402 -184326130 - AluSx SINE Alu -15 297 1 770 304 117 50 chr5 18759402 18759741 -184325791 + L1MC4 LINE L1 7479 7916 -126 383 0 0 21 chr5 18759741 18759789 -184325743 + (TG)n Simple_repeat Simple_repeat 2 48 0 770 304 117 50 chr5 18759789 18759918 -184325614 + L1MC4 LINE L1 7916 8035 -7 2220 109 0 0 chr5 18761059 18761361 -184324171 - AluSx SINE Alu -10 302 1 379 253 163 11 chr5 18762155 18762345 -184323187 - L2 LINE L2 -117 3196 2978 22 0 0 0 chr5 18764438 18764460 -184321072 + AT_rich Low_complexity Low_complexity 1 22 0 1130 172 23 18 chr5 18766233 18766454 -184319078 - AluJb SINE Alu -10 302 81 681 205 94 12 chr5 18766608 18766779 -184318753 + MER21B LTR ERV1 622 806 -57 2318 183 16 55 chr5 18766800 18766849 -184318683 - LTR54 LTR ERV1 0 510 461 2419 61 0 10 chr5 18766849 18767162 -184318370 + AluY SINE Alu 1 310 -1 2318 183 16 55 chr5 18767162 18767625 -184317907 - LTR54 LTR ERV1 -49 461 18 746 100 0 0 chr5 18767625 18767725 -184317807 + HY1 scRNA scRNA 1 100 -12 1486 129 125 4 chr5 18767758 18768022 -184317510 - AluJb SINE Alu -16 296 1 275 331 106 7 chr5 18768825 18768967 -184316565 + L2 LINE L2 2264 2419 -895 188 83 0 28 chr5 18769936 18769972 -184315560 + (TTTTG)n Simple_repeat Simple_repeat 5 39 0 1492 107 0 41 chr5 18770180 18770450 -184315082 + AluSq SINE Alu 37 295 -18 2367 70 0 0 chr5 18770501 18770799 -184314733 + AluY SINE Alu 1 298 -13 21 57 0 0 chr5 18770933 18770968 -184314564 + AT_rich Low_complexity Low_complexity 1 35 0 790 144 50 29 chr5 18771358 18771497 -184314035 - FLAM_C SINE Alu 0 143 2 1991 117 0 3 chr5 18771502 18771792 -184313740 - AluSg SINE Alu -21 289 1 1877 166 0 0 chr5 18772465 18772767 -184312765 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 18773632 18773656 -184311876 + AT_rich Low_complexity Low_complexity 1 24 0 2307 80 0 3 chr5 18773733 18774034 -184311498 - AluSq SINE Alu -13 300 1 252 329 108 13 chr5 18775326 18775484 -184310048 - MIR SINE MIR -70 192 20 308 137 40 63 chr5 18775667 18775691 -184309841 + MLT1H LTR MaLR 477 500 -49 1927 119 13 7 chr5 18775691 18775994 -184309538 + AluSp SINE Alu 1 305 -8 308 137 40 63 chr5 18775994 18776057 -184309475 + MLT1H LTR MaLR 500 549 0 847 194 4 106 chr5 18777030 18777257 -184308275 - MER63A DNA MER1_type 0 210 7 1798 105 49 0 chr5 18777493 18777759 -184307773 + AluSg SINE Alu 1 279 -31 222 333 68 68 chr5 18777800 18777992 -184307540 - L2 LINE L2 -524 2790 2599 836 278 28 0 chr5 18778664 18778880 -184306652 - MER58A DNA MER1_type 0 224 3 1870 164 7 0 chr5 18779215 18779525 -184306007 - AluJo SINE Alu 0 312 1 2394 125 14 6 chr5 18779554 18779915 -184305617 + THE1B LTR MaLR 1 364 0 226 233 0 0 chr5 18780215 18780275 -184305257 + T-rich Low_complexity Low_complexity 1 60 0 822 199 13 0 chr5 18780471 18780622 -184304910 + AluJb SINE Alu 140 292 -20 1071 164 19 56 chr5 18780640 18780853 -184304679 - MER2 DNA MER2_type -140 205 1 1565 250 59 27 chr5 18781994 18782551 -184302981 + L1MC4a LINE L1 5254 5828 -1980 25 51 0 0 chr5 18782782 18782821 -184302711 + AT_rich Low_complexity Low_complexity 1 39 0 2519 45 0 10 chr5 18782826 18783138 -184302394 + AluY SINE Alu 1 309 -2 21 0 0 0 chr5 18784295 18784316 -184301216 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 18784481 18784505 -184301027 + GC_rich Low_complexity Low_complexity 1 24 0 2120 116 73 14 chr5 18785071 18785425 -184300107 - THE1C LTR MaLR 0 375 1 191 254 34 34 chr5 18787136 18787195 -184298337 + L2 LINE L2 3200 3258 -14 292 227 19 63 chr5 18787212 18787345 -184298187 - L1ME3A LINE L1 -4 6166 6038 415 181 14 35 chr5 18787819 18787963 -184297569 + GA-rich Low_complexity Low_complexity 1 141 0 198 0 0 0 chr5 18788528 18788550 -184296982 + (CCG)n Simple_repeat Simple_repeat 2 23 0 203 213 27 40 chr5 18788560 18788635 -184296897 + G-rich Low_complexity Low_complexity 1 74 0 31 107 0 0 chr5 18788672 18788794 -184296738 + GC_rich Low_complexity Low_complexity 1 122 0 705 179 179 0 chr5 18789598 18789749 -184295783 + MER45A DNA AcHobo 1 178 0 837 132 62 7 chr5 18789973 18790138 -184295394 + AluY SINE Alu 136 308 0 26 30 0 0 chr5 18790953 18790986 -184294546 + AT_rich Low_complexity Low_complexity 1 33 0 182 36 0 36 chr5 18791466 18791494 -184294038 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1964 118 0 20 chr5 18791496 18791793 -184293739 - AluSq SINE Alu -20 293 3 313 232 99 49 chr5 18792027 18792169 -184293363 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 18792169 18792199 -184293333 + AT_rich Low_complexity Low_complexity 1 30 0 660 237 147 30 chr5 18793235 18793383 -184292149 + L1MC4a LINE L1 5807 5936 -1872 315 0 0 0 chr5 18793383 18793418 -184292114 + (TG)n Simple_repeat Simple_repeat 1 35 0 660 237 147 30 chr5 18793418 18793602 -184291930 + L1MC4a LINE L1 5936 6178 -1630 21 0 0 0 chr5 18794203 18794224 -184291308 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 18794711 18794735 -184290797 + (A)n Simple_repeat Simple_repeat 1 24 0 3568 134 13 19 chr5 18794971 18795153 -184290379 + MER1A DNA MER1_type 2 184 -2516 2345 80 0 0 chr5 18795153 18795453 -184290079 - AluSc SINE Alu -9 300 1 3568 134 13 19 chr5 18795453 18795799 -184289733 + MER1A DNA MER1_type 184 527 0 192 40 0 0 chr5 18795912 18795937 -184289595 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 894 141 0 0 chr5 18795940 18796082 -184289450 - AluSg/x SINE Alu -39 273 132 841 147 0 37 chr5 18796298 18796434 -184289098 + AluJo SINE Alu 1 131 -171 368 269 90 22 chr5 18796522 18796656 -184288876 - MIR SINE MIR -17 245 103 264 313 0 0 chr5 18796675 18796742 -184288790 - L3 LINE CR1 -3 1574 1508 839 220 0 0 chr5 18796767 18796935 -184288597 + AluJo SINE Alu 137 304 -8 267 182 30 15 chr5 18797547 18797613 -184287919 - MLT1K LTR MaLR -339 249 183 298 274 36 0 chr5 18797923 18798007 -184287525 - MLT1D LTR MaLR -418 87 1 821 129 41 18 chr5 18798007 18798033 -184287499 - Charlie5 DNA MER1_type -55 2569 2545 2270 97 0 0 chr5 18798033 18798342 -184287190 + AluSg SINE Alu 1 309 -1 821 129 41 18 chr5 18798342 18798485 -184287047 - Charlie5 DNA MER1_type -79 2545 2396 284 200 147 0 chr5 18799217 18799292 -184286240 - MLT1K LTR MaLR -320 268 183 2430 98 48 25 chr5 18800075 18800431 -184285101 + THE1B LTR MaLR 1 364 0 192 273 36 0 chr5 18801158 18801213 -184284319 - MIR SINE MIR -27 235 179 * 716 226 177 16 chr5 18801200 18801443 -184284089 - L2 LINE L2 -2 3311 3030 1578 287 136 19 chr5 18801543 18802321 -184283211 - L2 LINE L2 -550 2764 1896 181 209 23 0 chr5 18802320 18802363 -184283169 - MIR SINE MIR -82 180 137 * 2125 101 9 22 chr5 18802373 18802689 -184282843 - AluSx SINE Alu 0 312 1 359 309 0 137 chr5 18802689 18802750 -184282782 - MIR SINE MIR -62 146 78 3746 149 17 46 chr5 18802750 18803303 -184282229 + L1MA8 LINE L1 5568 6135 -156 2083 102 7 7 chr5 18803303 18803598 -184281934 + AluY SINE Alu 1 295 -16 3746 149 17 46 chr5 18803598 18803663 -184281869 + L1MA8 LINE L1 6135 6200 -91 1934 144 0 0 chr5 18803663 18803954 -184281578 - AluSx SINE Alu -21 291 1 3746 149 17 46 chr5 18803954 18804040 -184281492 + L1MA8 LINE L1 6200 6253 -38 2282 72 0 3 chr5 18804040 18804332 -184281200 - AluY SINE Alu -20 291 1 3746 149 17 46 chr5 18804332 18804370 -184281162 + L1MA8 LINE L1 6253 6291 0 359 309 0 137 chr5 18804370 18804478 -184281054 - MIR SINE MIR -130 78 5 1457 171 61 11 chr5 18805229 18805509 -184280023 - AluJb SINE Alu -15 297 4 1121 261 68 30 chr5 18805533 18805959 -184279573 - MLT1C LTR MaLR -3 464 23 285 256 143 57 chr5 18806236 18806466 -184279066 + MIR SINE MIR 6 255 -7 198 0 0 0 chr5 18807199 18807221 -184278311 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 503 291 146 0 chr5 18807536 18807694 -184277838 - MER5A DNA MER1_type 0 189 9 2125 124 13 0 chr5 18807816 18808122 -184277410 - AluSx SINE Alu -2 310 1 1883 154 55 19 chr5 18808463 18808788 -184276744 + MER1B DNA MER1_type 1 337 0 300 316 92 40 chr5 18809025 18809199 -184276333 - MIR SINE MIR -70 192 10 2079 106 0 0 chr5 18809398 18809711 -184275821 + AluSx SINE Alu 1 313 0 1625 86 5 5 chr5 18809822 18810075 -184275457 + AluSq SINE Alu 64 316 0 1768 190 16 25 chr5 18810531 18810742 -184274790 - MLT1A1 LTR MaLR 0 365 157 2139 110 3 0 chr5 18810742 18811042 -184274490 - AluSq SINE Alu -12 301 1 1768 190 16 25 chr5 18811042 18811198 -184274334 - MLT1A1 LTR MaLR -208 157 1 1953 131 10 0 chr5 18811806 18812097 -184273435 + AluSq SINE Alu 1 294 -19 384 77 0 0 chr5 18812568 18812620 -184272912 + (TA)n Simple_repeat Simple_repeat 2 53 0 1858 117 43 0 chr5 18812620 18812901 -184272631 - AluSg SINE Alu -17 293 1 246 148 37 19 chr5 18812902 18812956 -184272576 - Alu SINE Alu 0 308 254 949 246 86 0 chr5 18813024 18813256 -184272276 + MIR SINE MIR 8 259 -3 819 198 113 35 chr5 18813367 18813624 -184271908 - LTR19C LTR ERV1 -13 766 490 * 1464 199 24 95 chr5 18813606 18813738 -184271794 - LTR9 LTR ERV1 -221 391 251 2028 95 3 3 chr5 18813738 18814034 -184271498 - AluSx SINE Alu -16 296 1 1464 199 24 95 chr5 18814034 18814253 -184271279 - LTR9 LTR ERV1 -361 251 72 1941 96 10 14 chr5 18814253 18814546 -184270986 + AluSx SINE Alu 1 292 -20 1464 199 24 95 chr5 18814546 18814614 -184270918 - LTR9 LTR ERV1 -540 72 1 425 276 5 95 chr5 18814846 18815056 -184270476 + L1ME3A LINE L1 5704 5894 -276 1981 118 14 0 chr5 18815151 18815439 -184270093 + AluSx SINE Alu 3 294 -18 524 268 196 30 chr5 18815620 18815665 -184269867 - L1ME4a LINE L1 -11 6110 6074 2070 96 7 16 chr5 18815665 18815968 -184269564 - AluY SINE Alu -3 308 9 3525 62 0 17 chr5 18815976 18816440 -184269092 - L1PA7 LINE L1 -1 6153 5698 2118 115 0 31 chr5 18816448 18816771 -184268761 + AluSq SINE Alu 1 313 0 524 268 196 30 chr5 18816771 18817110 -184268422 - L1ME4a LINE L1 -57 6064 5641 192 125 47 0 chr5 18817133 18817197 -184268335 + (TA)n Simple_repeat Simple_repeat 2 68 0 413 214 14 93 chr5 18817198 18817338 -184268194 - L1ME LINE L1 -446 5675 5547 412 280 28 156 chr5 18818178 18818639 -184266893 + L2 LINE L2 2871 3272 0 26 0 0 0 chr5 18818710 18818736 -184266796 + AT_rich Low_complexity Low_complexity 1 26 0 2287 79 3 0 chr5 18818790 18819081 -184266451 - AluSg1 SINE Alu -17 292 1 190 156 250 0 chr5 18819103 18819167 -184266365 + MIR SINE MIR 72 151 -111 189 296 0 0 chr5 18820739 18820783 -184264749 + L2 LINE L2 3191 3234 -79 2308 86 3 6 chr5 18820919 18821233 -184264299 - AluSp SINE Alu 0 313 1 2907 132 5 2 chr5 18823641 18824067 -184261465 + MSTA LTR MaLR 2 428 0 2126 93 0 4 chr5 18824099 18824378 -184261154 + AluSq SINE Alu 19 296 -17 198 0 0 0 chr5 18824841 18824863 -184260669 + (TA)n Simple_repeat Simple_repeat 2 23 0 2000 119 7 0 chr5 18824879 18825173 -184260359 - AluSg SINE Alu -14 296 1 263 189 38 0 chr5 18825806 18825859 -184259673 + Tigger5 DNA MER2_type 1 55 -2268 293 165 0 165 chr5 18825869 18825972 -184259560 + Tigger5 DNA MER2_type 2237 2322 -1 366 183 0 0 chr5 18825987 18826058 -184259474 + (TG)n Simple_repeat Simple_repeat 2 72 0 1097 228 57 15 chr5 18826071 18826334 -184259198 - MLT2D LTR ERVL -50 364 91 577 185 20 80 chr5 18826406 18826557 -184258975 - MER103 DNA DNA -22 144 3 1984 76 0 0 chr5 18827052 18827302 -184258230 - AluY SINE Alu -12 299 50 597 75 0 12 chr5 18827468 18827548 -184257984 - MADE1 DNA Mariner -1 79 1 1986 147 39 52 chr5 18827996 18828039 -184257493 - MER57A LTR ERV1 0 403 361 1874 121 4 4 chr5 18828039 18828319 -184257213 + AluJb SINE Alu 1 280 -32 180 0 0 0 chr5 18828320 18828340 -184257192 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1986 147 39 52 chr5 18828340 18828702 -184256830 - MER57A LTR ERV1 -41 362 1 1984 115 11 0 chr5 18829735 18830022 -184255510 - AluSx SINE Alu -22 290 1 554 267 16 37 chr5 18830483 18830674 -184254858 + LTR33 LTR ERVL 1 187 -334 198 0 0 0 chr5 18830682 18830704 -184254828 + (T)n Simple_repeat Simple_repeat 1 22 0 1922 85 4 0 chr5 18830794 18831053 -184254479 - AluSp SINE Alu -53 260 1 4148 117 13 13 chr5 18831108 18831741 -184253791 + MER51A LTR ERV1 1 633 -1 680 286 65 13 chr5 18832256 18832487 -184253045 - MIR SINE MIR 0 262 20 653 273 157 0 chr5 18833240 18833456 -184252076 + MIR SINE MIR 13 262 0 194 254 0 84 chr5 18833477 18833503 -184252029 - MIR SINE MIR -86 122 95 2207 158 30 25 chr5 18833503 18833865 -184251667 + THE1B LTR MaLR 1 364 0 194 254 0 84 chr5 18833865 18833909 -184251623 - MIR SINE MIR -113 95 58 236 299 11 58 chr5 18834225 18834312 -184251220 + L2 LINE L2 3230 3312 -1 234 357 49 21 chr5 18834714 18834857 -184250675 - L2 LINE L2 -671 2643 2497 180 77 0 0 chr5 18835151 18835177 -184250355 + (TC)n Simple_repeat Simple_repeat 1 26 0 1094 33 22 44 chr5 18836126 18836309 -184249223 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 862 219 0 0 chr5 18836331 18836477 -184249055 - FRAM SINE Alu -30 146 1 737 236 64 55 chr5 18836593 18836909 -184248623 + MER39 LTR ERV1 1 533 -174 1348 136 84 1 chr5 18836932 18837337 -184248195 - LTR54 LTR ERV1 -5 505 10 700 189 8 0 chr5 18837357 18837489 -184248043 + MER39 LTR ERV1 553 685 -22 3637 149 18 43 chr5 18837565 18837905 -184247627 + MER39B LTR ERV1 1 317 -336 2038 143 10 0 chr5 18837905 18838212 -184247320 + AluSx SINE Alu 1 310 -2 3637 149 18 43 chr5 18838212 18838537 -184246995 + MER39B LTR ERV1 317 649 -4 2274 90 7 0 chr5 18838621 18838920 -184246612 + AluSx SINE Alu 12 312 0 2099 137 0 0 chr5 18840025 18840317 -184245215 - AluSx SINE Alu -8 304 13 302 365 34 17 chr5 18840573 18840751 -184244781 - L1MC4a LINE L1 -1836 5972 5792 1219 176 70 19 chr5 18840931 18841244 -184244288 + L1MC4a LINE L1 6163 6491 -1317 1500 183 3 24 chr5 18841335 18841759 -184243773 - AluJo SINE Alu 0 418 1 288 280 43 11 chr5 18843230 18843323 -184242209 - MIR3 SINE MIR -3 205 110 2020 110 0 18 chr5 18843382 18843663 -184241869 - AluSx SINE Alu -36 276 1 1977 141 0 3 chr5 18844668 18844959 -184240573 - AluSx SINE Alu -18 294 5 2149 90 38 3 chr5 18845100 18845389 -184240143 + AluSc SINE Alu 1 299 -10 1743 163 3 29 chr5 18845419 18845725 -184239807 + AluJo SINE Alu 1 298 -14 207 0 0 0 chr5 18845932 18845955 -184239577 + (TA)n Simple_repeat Simple_repeat 2 24 0 2488 161 91 106 chr5 18845957 18846913 -184238619 + MER21A LTR ERV1 26 924 -7 2306 92 0 3 chr5 18847047 18847340 -184238192 - AluSx SINE Alu -20 292 1 1693 101 20 2 chr5 18847589 18847903 -184237629 + MER51B LTR ERV1 1 377 0 234 326 93 88 chr5 18847905 18847964 -184237568 + MIR SINE MIR 69 126 -136 2237 118 0 13 chr5 18847964 18848278 -184237254 - AluSx SINE Alu 0 312 3 234 326 93 88 chr5 18848278 18848411 -184237121 + MIR SINE MIR 126 262 0 2415 48 3 29 chr5 18848533 18848844 -184236688 + AluY SINE Alu 1 303 -8 2424 97 0 0 chr5 18848874 18849182 -184236350 - AluSq SINE Alu -5 308 1 1504 172 24 31 chr5 18849263 18849553 -184235979 + AluJo SINE Alu 5 292 -20 2309 107 0 0 chr5 18849612 18849912 -184235620 - AluSg1 SINE Alu -9 300 1 300 300 0 0 chr5 18849999 18850079 -184235453 - L1MC/D LINE L1 -2024 5784 5705 2924 186 36 42 chr5 18850180 18850819 -184234713 + L1MB5 LINE L1 5527 6161 -13 1641 141 116 0 chr5 18851486 18851763 -184233769 + AluJb SINE Alu 1 309 -3 3784 185 24 10 chr5 18851944 18852659 -184232873 - L1MB5 LINE L1 -8 6166 5442 4251 209 44 59 chr5 18852667 18853980 -184231552 - L1MB5 LINE L1 -755 5391 4099 252 246 33 0 chr5 18853979 18854040 -184231492 + L1MB5 LINE L1 4068 4130 -2016 * 2267 120 0 0 chr5 18854930 18855231 -184230301 + AluSx SINE Alu 1 301 -11 618 219 39 16 chr5 18855419 18855547 -184229985 + MER94 DNA DNA 4 134 0 2210 96 7 0 chr5 18855572 18855865 -184229667 - AluSq SINE Alu -16 297 3 213 289 122 33 chr5 18856841 18857028 -184228504 + MIR SINE MIR 41 241 -21 2353 88 3 0 chr5 18857226 18857522 -184228010 - AluSq SINE Alu -16 297 1 262 301 43 11 chr5 18857894 18857987 -184227545 - MLT1L LTR MaLR -366 249 154 2045 100 82 0 chr5 18858865 18859145 -184226387 + AluSx SINE Alu 1 303 -9 29 0 0 0 chr5 18859670 18859699 -184225833 + AT_rich Low_complexity Low_complexity 1 29 0 2552 63 0 0 chr5 18859936 18860236 -184225296 - AluY SINE Alu -11 300 1 2300 99 7 3 chr5 18860796 18861099 -184224433 - AluSx SINE Alu -8 304 1 23 0 0 0 chr5 18861240 18861263 -184224269 + AT_rich Low_complexity Low_complexity 1 23 0 304 272 19 58 chr5 18863244 18863347 -184222185 + L2 LINE L2 3191 3289 -24 229 386 35 7 chr5 18864052 18864197 -184221335 - MIR3 SINE MIR -2 206 58 2894 239 72 27 chr5 18864884 18865812 -184219720 - L1ME3A LINE L1 -5 6234 5265 369 109 0 0 chr5 18865813 18865868 -184219664 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 1840 172 7 0 chr5 18865895 18866198 -184219334 - AluJb SINE Alu -7 305 1 773 271 75 47 chr5 18866198 18866692 -184218840 - L1ME3A LINE L1 -948 5267 4760 658 256 80 67 chr5 18866893 18867206 -184218326 - L1ME3A LINE L1 -1980 4235 3919 914 173 0 84 chr5 18867223 18867425 -184218107 - MLT1A1 LTR MaLR -46 319 135 316 288 16 40 chr5 18867433 18867558 -184217974 - L1ME3A LINE L1 -2301 3914 3793 2579 189 53 4 chr5 18867558 18868070 -184217462 - MER90 LTR ERV1 0 614 78 2092 142 9 15 chr5 18868062 18868387 -184217145 + MER1B DNA MER1_type 17 339 0 * 1130 169 25 158 chr5 18868430 18868792 -184216740 + MER31B LTR ERV1 1 314 -152 318 286 139 61 chr5 18868795 18869089 -184216443 - L1ME3A LINE L1 -4205 2191 1875 2234 123 3 0 chr5 18869547 18869849 -184215683 - AluSx SINE Alu -9 303 1 1745 158 133 36 chr5 18871651 18872011 -184213521 - MLT2C1 LTR ERVL -1 396 2 32 0 0 0 chr5 18872526 18872558 -184212974 + AT_rich Low_complexity Low_complexity 1 32 0 1664 168 4 18 chr5 18872565 18872845 -184212687 - AluJo SINE Alu -36 276 1 2616 146 54 5 chr5 18873982 18874387 -184211145 - MSTB LTR MaLR -1 425 1 2220 125 3 0 chr5 18874602 18874907 -184210625 - AluSg SINE Alu -4 306 1 358 215 23 17 chr5 18875079 18875256 -184210276 + (CCTAT)n Simple_repeat Simple_repeat 3 180 0 252 0 0 0 chr5 18875518 18875546 -184209986 + (TG)n Simple_repeat Simple_repeat 2 29 0 993 169 47 0 chr5 18879211 18879383 -184206149 - MER5A DNA MER1_type -7 182 3 364 326 160 15 chr5 18879472 18880009 -184205523 + L2 LINE L2 1895 2509 -805 2179 89 7 20 chr5 18880167 18880471 -184205061 - AluY SINE Alu -11 300 1 1790 155 3 26 chr5 18880585 18880894 -184204638 - AluJo SINE Alu -10 302 1 218 222 32 16 chr5 18880922 18880985 -184204547 - MIR SINE MIR -95 167 104 656 207 76 0 chr5 18881294 18881439 -184204093 - L1MD2 LINE L1 -10 6349 6194 1320 185 63 15 chr5 18881445 18881715 -184203817 - L1MD2 LINE L1 -218 6141 5859 277 123 35 18 chr5 18881714 18881771 -184203761 - L1MDa LINE L1 -3918 2622 2565 * 6064 210 76 36 chr5 18881767 18881794 -184203738 - L1MDa LINE L1 -4781 1759 1735 2104 119 0 13 chr5 18881794 18881812 -184203720 - AluSx SINE Alu -6 306 289 210 71 0 0 chr5 18881812 18881840 -184203692 + (TATG)n Simple_repeat Simple_repeat 2 29 0 2104 119 0 13 chr5 18881840 18882131 -184203401 - AluSx SINE Alu -23 289 1 6064 210 76 36 chr5 18882131 18882433 -184203099 - L1MDa LINE L1 -4805 1735 1447 1462 122 0 0 chr5 18882433 18882629 -184202903 - AluSx SINE Alu -116 196 1 6064 210 76 36 chr5 18882629 18883661 -184201871 - L1MDa LINE L1 -5093 1447 318 2315 109 0 6 chr5 18883661 18883974 -184201558 - AluSx SINE Alu -1 311 1 6064 210 76 36 chr5 18883974 18884232 -184201300 - L1MDa LINE L1 -6222 318 72 257 292 14 0 chr5 18884602 18884674 -184200858 + L2 LINE L2 2588 2660 -654 182 373 71 28 chr5 18884803 18885015 -184200517 + L2 LINE L2 2829 3049 -223 645 283 150 4 chr5 18885136 18885362 -184200170 + MIR SINE MIR 3 261 -1 1219 206 42 8 chr5 18885964 18886225 -184199307 - MLT1A1 LTR MaLR -2 363 94 1613 135 69 99 chr5 18886225 18886506 -184199026 + MER47A DNA MER2_type 1 270 -2053 1853 150 0 7 chr5 18886506 18886780 -184198752 - AluSx SINE Alu -21 291 20 1613 135 69 99 chr5 18886780 18886862 -184198670 + MER47A DNA MER2_type 270 353 -13 445 141 54 43 chr5 18886872 18886964 -184198568 - MLT1A1 LTR MaLR -279 95 3 901 183 7 0 chr5 18887006 18887159 -184198373 - L1PB4 LINE L1 -5 6151 5998 1591 128 143 0 chr5 18887553 18887804 -184197728 - AluSx SINE Alu -24 288 2 236 116 47 0 chr5 18888047 18888090 -184197442 + L2 LINE L2 2935 2979 -334 217 254 60 15 chr5 18888087 18888154 -184197378 - L2 LINE L2 -370 2944 2875 * 1919 157 6 10 chr5 18888392 18888705 -184196827 + AluJo SINE Alu 1 312 0 798 221 60 45 chr5 18888955 18889255 -184196277 + MLT1J2 LTR MaLR 64 367 -42 489 283 177 0 chr5 18889342 18889540 -184195992 + MIR SINE MIR 7 239 -23 439 213 66 37 chr5 18889820 18889956 -184195576 + MLT1G LTR MaLR 56 195 -372 1686 187 7 14 chr5 18889991 18890275 -184195257 - AluJo SINE Alu -30 282 1 833 248 0 0 chr5 18890283 18890440 -184195092 - FRAM SINE Alu -18 158 2 588 264 203 5 chr5 18890494 18890706 -184194826 + MLT1G LTR MaLR 251 504 -86 1590 247 84 40 chr5 18890706 18891229 -184194303 + L1ME3A LINE L1 5391 5936 -234 674 259 32 48 chr5 18891335 18891586 -184193946 + L1ME3A LINE L1 5924 6170 0 366 263 21 0 chr5 18891653 18891748 -184193784 + MLT1G LTR MaLR 499 595 0 277 324 45 36 chr5 18891860 18891971 -184193561 + L2 LINE L2 3155 3266 -6 2401 92 3 0 chr5 18892366 18892669 -184192863 - AluSx SINE Alu -8 304 1 431 319 64 43 chr5 18892840 18893028 -184192504 + MIR3 SINE MIR 14 205 -3 1929 146 14 3 chr5 18893088 18893382 -184192150 - AluSq SINE Alu -16 297 1 2471 154 73 0 chr5 18895314 18895710 -184189822 - MSTB LTR MaLR 0 426 2 289 265 12 12 chr5 18895782 18895865 -184189667 + MIR SINE MIR 172 254 -8 586 260 47 58 chr5 18895957 18896215 -184189317 - MLT1H LTR MaLR 0 549 295 465 244 148 0 chr5 18896277 18896412 -184189120 - MLT1H LTR MaLR -394 155 1 1213 254 81 73 chr5 18896819 18897323 -184188209 + MLT1K LTR MaLR 67 574 -14 298 311 175 39 chr5 18898164 18898473 -184187059 + L2 LINE L2 2921 3271 -1 2232 124 16 59 chr5 18898599 18898952 -184186580 - MER4D LTR ERV1 0 872 536 1685 112 16 8 chr5 18898952 18899210 -184186322 + AluSq SINE Alu 54 313 0 2232 124 16 59 chr5 18899210 18899244 -184186288 - MER4D LTR ERV1 -336 536 502 2124 88 56 7 chr5 18899243 18899549 -184185983 - MER4D LTR ERV1 -551 321 1 * 5072 135 58 15 chr5 18899801 18900659 -184184873 + MER4D LTR ERV1 1 895 -8 583 110 9 46 chr5 18901554 18901663 -184183869 + L1MA4 LINE L1 6196 6300 0 1111 224 56 14 chr5 18902026 18902312 -184183220 - LTR16C LTR ERVL 0 491 194 3101 227 19 9 chr5 18902516 18903163 -184182369 + MER82 DNA MER2_type 1 653 0 2398 88 3 0 chr5 18903165 18903462 -184182070 - AluSq SINE Alu -13 300 3 1861 98 0 0 chr5 18903990 18904234 -184181298 + AluSq SINE Alu 52 295 -18 1906 128 17 27 chr5 18904397 18904731 -184180801 + AluSx SINE Alu 1 312 0 764 243 23 18 chr5 18905013 18905231 -184180301 - L2 LINE L2 -1 3312 3094 265 313 98 40 chr5 18905428 18905776 -184179756 + LTR16C LTR ERVL 122 489 -2 1623 141 0 104 chr5 18905827 18906174 -184179358 + AluY SINE Alu 1 311 0 291 281 83 8 chr5 18906304 18906425 -184179107 - L2 LINE L2 -428 2886 2757 185 195 24 0 chr5 18906688 18906729 -184178803 - L2 LINE L2 -1 3312 3271 1099 120 29 17 chr5 18906790 18906965 -184178567 - L1MB4 LINE L1 0 6180 6004 1655 196 62 57 chr5 18906978 18907397 -184178135 + MER31B LTR ERV1 1 421 -45 3739 172 32 15 chr5 18907436 18907503 -184178029 - L1MB4 LINE L1 -190 5990 5926 1930 199 37 0 chr5 18907503 18907855 -184177677 - MLT1A1 LTR MaLR 0 365 1 3739 172 32 15 chr5 18907855 18908528 -184177004 - L1MB4 LINE L1 -254 5926 5240 1513 223 105 50 chr5 18908545 18909030 -184176502 + MLT2B1 LTR ERVL 1 512 -8 1693 145 0 0 chr5 18909317 18909559 -184175973 - AluSq SINE Alu -71 242 1 371 186 356 17 chr5 18909776 18909894 -184175638 + MER5A DNA MER1_type 32 189 0 4084 120 62 74 chr5 18909918 18911309 -184174223 - pTR5 LTR ERV1 0 2438 66 334 336 25 17 chr5 18911342 18911461 -184174071 - MIR3 SINE MIR -5 203 84 266 255 112 20 chr5 18911555 18911653 -184173879 - MIR3 SINE MIR -11 197 91 780 281 33 83 chr5 18911670 18911732 -184173800 - MLT1I LTR MaLR -3 406 342 2154 105 3 11 chr5 18911732 18912045 -184173487 - AluSx SINE Alu 0 311 1 780 281 33 83 chr5 18912045 18912340 -184173192 - MLT1I LTR MaLR -67 342 66 569 217 169 63 chr5 18912340 18912529 -184173003 + MER63A DNA MER1_type 1 209 -1 2139 114 20 0 chr5 18912593 18912891 -184172641 + AluSx SINE Alu 3 306 -6 25 0 0 0 chr5 18913471 18913496 -184172036 + AT_rich Low_complexity Low_complexity 1 25 0 1917 169 0 3 chr5 18913496 18913804 -184171728 - AluJo SINE Alu -5 307 1 893 260 31 35 chr5 18914339 18914593 -184170939 - MIR SINE MIR -2 260 8 240 305 61 53 chr5 18914945 18915076 -184170456 - L3 LINE CR1 -251 1326 1195 526 244 15 37 chr5 18916042 18916177 -184169355 - MER94 DNA DNA -2 132 1 468 328 101 4 chr5 18916909 18917147 -184168385 + MIR SINE MIR 2 262 0 1590 90 11 93 chr5 18917376 18917644 -184167888 + L1MA5 LINE L1 6053 6298 -2 283 95 0 0 chr5 18917687 18917729 -184167803 - AluSx SINE Alu -4 297 256 1688 96 0 0 chr5 18917730 18917939 -184167593 - AluSx SINE Alu -93 219 11 264 351 23 15 chr5 18918543 18918674 -184166858 - MIR SINE MIR -128 134 3 272 75 25 0 chr5 18919142 18919182 -184166350 + MADE1 DNA Mariner 40 80 0 371 268 62 39 chr5 18920803 18920982 -184164550 - MIR SINE MIR -14 248 66 568 298 19 29 chr5 18921109 18921317 -184164215 + MIR SINE MIR 2 207 -55 25 83 0 0 chr5 18921346 18921406 -184164126 + AT_rich Low_complexity Low_complexity 1 60 0 2083 135 7 0 chr5 18921993 18922289 -184163243 - AluSx SINE Alu -14 298 1 256 324 18 36 chr5 18922364 18922475 -184163057 + L2 LINE L2 2660 2768 -546 322 316 86 48 chr5 18922510 18922719 -184162813 + L2 LINE L2 2757 2973 -341 786 218 12 18 chr5 18922755 18922925 -184162607 + MER5B DNA MER1_type 7 175 -3 618 344 39 23 chr5 18922925 18923182 -184162350 + L2 LINE L2 3011 3271 -1 222 88 18 35 chr5 18926414 18926471 -184159061 + (TA)n Simple_repeat Simple_repeat 1 56 0 470 300 64 55 chr5 18926477 18926697 -184158835 - MIR SINE MIR -28 234 13 201 74 0 0 chr5 18926842 18926869 -184158663 + (TAA)n Simple_repeat Simple_repeat 3 29 0 1624 194 105 25 chr5 18927522 18927711 -184157821 - MLT1B LTR MaLR 0 390 218 2095 141 0 3 chr5 18927711 18928015 -184157517 - AluSx SINE Alu -9 303 1 1624 194 105 25 chr5 18928015 18928186 -184157346 - MLT1B LTR MaLR -172 218 1 235 313 113 9 chr5 18928549 18928664 -184156868 - L2 LINE L2 -9 3263 3137 2820 158 41 6 chr5 18929056 18929524 -184156008 - MER31A LTR ERV1 0 485 2 2188 99 0 40 chr5 18929571 18929893 -184155639 + AluSc SINE Alu 1 309 0 318 411 8 0 chr5 18929997 18930121 -184155411 - L2 LINE L2 -3 3269 3145 25 31 0 0 chr5 18930860 18930892 -184154640 + AT_rich Low_complexity Low_complexity 1 32 0 734 168 0 9 chr5 18931059 18931172 -184154360 + FLAM_A SINE Alu 6 117 -25 449 268 89 56 chr5 18931313 18931526 -184154006 + MIR SINE MIR 4 223 -39 2312 91 3 10 chr5 18932021 18932330 -184153202 - AluSq SINE Alu -6 307 1 432 329 13 0 chr5 18932554 18932709 -184152823 - MLT1K LTR MaLR -8 580 424 613 143 0 38 chr5 18932919 18933024 -184152508 - MER45C DNA AcHobo 0 953 853 1180 78 0 0 chr5 18933027 18933168 -184152364 + AluSp/q SINE Alu 156 296 -17 1735 254 88 70 chr5 18933168 18933194 -184152338 - MER45C DNA AcHobo -716 865 841 345 47 0 0 chr5 18933194 18933237 -184152295 + (TA)n Simple_repeat Simple_repeat 2 44 0 1735 254 88 70 chr5 18933237 18933518 -184152014 - MER45C DNA AcHobo -740 841 566 2534 128 26 0 chr5 18933518 18933870 -184151662 - THE1B LTR MaLR -3 361 1 1735 254 88 70 chr5 18933870 18934359 -184151173 - MER45C DNA AcHobo -1015 566 54 2144 109 0 34 chr5 18934845 18935165 -184150367 - AluSc SINE Alu 0 309 1 27 0 0 0 chr5 18935519 18935546 -184149986 + AT_rich Low_complexity Low_complexity 1 27 0 927 113 0 0 chr5 18935546 18935670 -184149862 - AluJb SINE Alu -187 125 2 2208 110 3 0 chr5 18936788 18937079 -184148453 + AluSx SINE Alu 1 292 -20 709 235 12 0 chr5 18938206 18938368 -184147164 + MER20 DNA MER1_type 56 219 0 2192 126 0 3 chr5 18939105 18939414 -184146118 + AluSx SINE Alu 1 308 -4 1569 259 92 36 chr5 18939442 18940026 -184145506 - HERVL LTR ERVL -1575 4079 3463 1444 216 276 28 chr5 18940026 18940555 -184144977 - MLT2F LTR ERVL 0 663 4 709 265 25 10 chr5 18940558 18940754 -184144778 - HERVL LTR ERVL -2258 3506 3308 4434 58 0 2 chr5 18940809 18941331 -184144201 - L1PA8 LINE L1 -6 6166 5646 310 350 73 32 chr5 18941435 18941749 -184143783 - L1MEd LINE L1 -5044 1075 749 2983 149 60 9 chr5 18944268 18944798 -184140734 + MER89 LTR ERV1 2 558 -1 2236 114 68 52 chr5 18945093 18945462 -184140070 - THE1C LTR MaLR 0 375 1 228 329 0 0 chr5 18945493 18945566 -184139966 - L2 LINE L2 -15 3298 3226 273 57 0 0 chr5 18945739 18945774 -184139758 + (TG)n Simple_repeat Simple_repeat 2 36 0 231 333 22 11 chr5 18945785 18945875 -184139657 + MIR SINE MIR 84 174 -88 369 294 196 0 chr5 18946349 18946512 -184139020 + L2 LINE L2 2563 2757 -557 23 33 0 0 chr5 18947215 18947245 -184138287 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 18947468 18947497 -184138035 + AT_rich Low_complexity Low_complexity 1 29 0 430 327 96 56 chr5 18947531 18948085 -184137447 + L2 LINE L2 2736 3311 -2 325 303 97 7 chr5 18948090 18948245 -184137287 - L1ME4a LINE L1 -176 5945 5777 261 116 0 0 chr5 18948255 18948298 -184137234 - L1M4 LINE L1 -971 5175 5133 300 287 87 20 chr5 18948904 18949054 -184136478 + HAL1b LINE L1 424 583 -765 189 0 0 0 chr5 18949397 18949418 -184136114 + (T)n Simple_repeat Simple_repeat 1 21 0 2310 102 0 0 chr5 18949700 18949994 -184135538 + AluSc SINE Alu 1 294 -15 1500 242 142 11 chr5 18950067 18950616 -184134916 + L2 LINE L2 1591 2211 -1103 490 205 70 16 chr5 18950621 18950752 -184134780 - MLT1C LTR MaLR 0 467 345 1898 150 72 85 chr5 18951090 18951426 -184134106 - MSTD LTR MaLR 0 396 64 790 183 15 0 chr5 18951426 18951557 -184133975 + FLAM_C SINE Alu 1 133 0 1898 150 72 85 chr5 18951557 18951621 -184133911 - MSTD LTR MaLR -332 64 1 302 310 84 35 chr5 18952303 18952445 -184133087 + MIR SINE MIR 12 160 -102 1751 109 4 0 chr5 18952656 18952886 -184132646 - AluSx SINE Alu -81 231 1 2887 171 62 10 chr5 18954633 18955113 -184130419 - MLT1D LTR MaLR 0 505 1 258 358 29 15 chr5 18955276 18955413 -184130119 - ERVL LTR ERVL -499 5265 5127 844 265 81 58 chr5 18955622 18956451 -184129081 - L1MEd LINE L1 -4863 1256 520 400 363 126 27 chr5 18956980 18957465 -184128067 - ERVL LTR ERVL -1148 4616 4084 212 162 0 0 chr5 18957834 18957871 -184127661 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2878 157 32 52 chr5 18957910 18958423 -184127109 - L1MA9 LINE L1 -33 6279 5758 6566 138 84 12 chr5 18958423 18958860 -184126672 - Tigger3b DNA MER2_type -1797 1231 827 2233 116 0 0 chr5 18958860 18959152 -184126380 + AluSg SINE Alu 1 292 -18 6566 138 84 12 chr5 18959152 18959863 -184125669 - Tigger3b DNA MER2_type -2201 827 1 264 30 0 0 chr5 18959863 18959896 -184125636 + (TA)n Simple_repeat Simple_repeat 1 33 0 2878 157 32 52 chr5 18959896 18959998 -184125534 - L1MA9 LINE L1 -552 5760 5675 222 296 91 11 chr5 18961908 18961996 -184123536 - L2 LINE L2 -1 3312 3218 237 65 0 0 chr5 18962064 18962095 -184123437 + (GA)n Simple_repeat Simple_repeat 2 32 0 1131 288 81 22 chr5 18962131 18962740 -184122792 - L2 LINE L2 0 3313 2661 3174 116 30 25 chr5 18963014 18963544 -184121988 + MLT2A2 LTR ERVL 1 520 0 348 313 31 25 chr5 18964130 18964290 -184121242 + L3 LINE CR1 1412 1572 -5 743 243 29 33 chr5 18964579 18964789 -184120743 + MER3 DNA MER1_type 1 209 0 623 163 20 7 chr5 18964969 18965122 -184120410 + (TCTA)n Simple_repeat Simple_repeat 4 158 0 28 48 0 0 chr5 18966724 18966766 -184118766 + AT_rich Low_complexity Low_complexity 1 42 0 14920 204 32 32 chr5 18966766 18971643 -184113889 - L1MA5 LINE L1 -6 7315 2455 6815 130 17 247 chr5 18971624 18974219 -184111313 - L1MA5 LINE L1 -5167 2001 5 * 309 308 15 31 chr5 18974261 18974391 -184111141 - LTR16B LTR ERVL -298 166 39 2506 60 7 0 chr5 18974482 18974783 -184110749 + MLT2A1 LTR ERVL 8 310 -134 45505 65 9 1 chr5 18974783 18980383 -184105149 + HERVL-A1-A1 LTR ERVL 13 5654 0 3736 65 0 9 chr5 18980383 18980831 -184104701 + MLT2A1 LTR ERVL 1 444 0 499 313 71 6 chr5 18980832 18981014 -184104518 - ERVL LTR ERVL -1487 4277 4084 1240 146 58 120 chr5 18982346 18982655 -184102877 - L1MC/D LINE L1 -2008 5777 5488 * 1433 165 189 3 chr5 18982652 18983022 -184102510 + L1MCa LINE L1 1830 2268 -4158 240 250 0 0 chr5 18983229 18983297 -184102235 - L1MC4 LINE L1 -1339 6703 6636 507 197 88 15 chr5 18983321 18983458 -184102074 + HAL1b LINE L1 349 495 -853 227 268 145 22 chr5 18983449 18983587 -184101945 - HAL1b LINE L1 -473 875 721 * 4734 43 9 0 chr5 18983731 18984312 -184101220 - L1P LINE L1 -751 5395 4810 6859 184 10 12 chr5 18984412 18986097 -184099435 + L1P5 LINE L1 3885 5564 -587 1603 232 5 19 chr5 18986284 18986663 -184098869 + MLT1A2 LTR MaLR 1 374 0 770 263 202 11 chr5 18986667 18987058 -184098474 + MLT1C LTR MaLR 1 466 -1 184 280 20 20 chr5 18987305 18987355 -184098177 + L2 LINE L2 3223 3272 0 244 255 0 0 chr5 18987549 18987596 -184097936 + polypurine Low_complexity Low_complexity 4 50 0 511 252 7 28 chr5 18987686 18987829 -184097703 - MLT1D LTR MaLR -365 140 1 3802 146 140 7 chr5 18988036 18988764 -184096768 + LTR1B LTR ERV1 2 826 0 210 301 55 0 chr5 18988824 18988897 -184096635 + MIR SINE MIR 71 147 -115 639 272 72 38 chr5 18989283 18989518 -184096014 - MIR SINE MIR -16 246 4 365 149 149 37 chr5 18991517 18991624 -184093908 - L1MB7 LINE L1 -19 6165 6047 22 0 0 0 chr5 18992466 18992488 -184093044 + AT_rich Low_complexity Low_complexity 1 22 0 288 303 53 53 chr5 18992518 18992670 -184092862 + MIR SINE MIR 79 230 -32 1595 152 114 20 chr5 18993644 18993986 -184091546 + THE1C LTR MaLR 2 375 0 288 179 51 51 chr5 18994161 18994239 -184091293 + MLT1L LTR MaLR 231 390 -203 1651 192 36 9 chr5 18996631 18996964 -184088568 - L1PA16 LINE L1 -22 6144 5803 612 363 49 14 chr5 18997193 18997559 -184087973 - LTR16C LTR ERVL 0 491 113 242 210 0 60 chr5 18998151 18998318 -184087214 + (TA)n Simple_repeat Simple_repeat 2 158 0 2227 147 0 16 chr5 18998361 18998735 -184086797 + L1PB1 LINE L1 5776 6143 -8 24 32 0 0 chr5 18998741 18998772 -184086760 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 19000433 19000458 -184085074 + AT_rich Low_complexity Low_complexity 1 25 0 356 390 52 0 chr5 19001317 19001662 -184083870 - ERVL LTR ERVL -3700 2064 1656 1162 119 0 0 chr5 19002340 19002528 -184083004 - AluSg/x SINE Alu 0 321 134 1770 96 118 11 chr5 19002528 19002799 -184082733 - AluSg1 SINE Alu -9 300 1 2300 112 48 31 chr5 19003640 19003998 -184081534 + THE1B LTR MaLR 1 364 0 258 62 0 0 chr5 19003998 19004030 -184081502 + THE1B-int LTR MaLR 1 32 -1548 * 3421 111 62 0 chr5 19004028 19004525 -184081007 + THE1B-int LTR MaLR 1053 1580 0 2094 133 48 25 chr5 19004527 19004881 -184080651 + THE1B LTR MaLR 3 364 0 2266 113 0 0 chr5 19005589 19005890 -184079642 - AluSx SINE Alu -11 301 1 303 291 43 10 chr5 19005918 19006037 -184079495 + MIR3 SINE MIR 78 202 -6 184 70 47 47 chr5 19006514 19006557 -184078975 + T-rich Low_complexity Low_complexity 2 44 0 717 185 143 37 chr5 19006587 19006776 -184078756 + MER3 DNA MER1_type 1 209 0 805 216 38 56 chr5 19006955 19007168 -184078364 + MER58A DNA MER1_type 1 209 -15 2128 104 22 32 chr5 19007561 19007877 -184077655 - AluSq SINE Alu 0 313 1 304 281 107 8 chr5 19008384 19008505 -184077027 + MLT1H1 LTR MaLR 422 554 -1 2311 105 0 3 chr5 19008766 19009072 -184076460 + AluSx SINE Alu 1 305 -7 3014 127 82 24 chr5 19009151 19009649 -184075883 + MER1A DNA MER1_type 1 527 0 353 361 5 25 chr5 19009714 19009916 -184075616 - L2 LINE L2 -3 3310 3113 282 341 157 18 chr5 19009935 19010152 -184075380 - L2 LINE L2 -885 2429 2183 941 235 110 25 chr5 19010452 19010558 -184074974 + L1M4 LINE L1 2728 2824 -3322 2286 108 0 9 chr5 19010558 19010873 -184074659 + AluSq SINE Alu 1 312 -1 941 235 110 25 chr5 19010873 19011276 -184074256 + L1M4 LINE L1 2824 3280 -2866 1179 133 5 0 chr5 19011470 19011666 -184073866 - L1MA2 LINE L1 0 6304 6108 778 69 0 0 chr5 19011723 19011824 -184073708 - L1P1 LINE L1 -414 5741 5641 * 2528 74 17 14 chr5 19011744 19012096 -184073436 + L1PA2 LINE L1 5657 6009 -146 853 51 8 17 chr5 19012280 19012397 -184073135 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 19012397 19012417 -184073115 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1685 101 0 0 chr5 19012472 19012709 -184072823 - L1PA8 LINE L1 -11 6161 5925 2150 130 0 0 chr5 19015407 19015715 -184069817 - AluSx SINE Alu -2 310 3 194 300 56 56 chr5 19015887 19015977 -184069555 - L3b LINE CR1 -94 1489 1400 2193 121 0 0 chr5 19016312 19016609 -184068923 - AluSx SINE Alu -13 299 3 188 253 147 27 chr5 19016905 19016980 -184068552 - MIR SINE MIR -69 139 56 233 312 11 21 chr5 19017903 19017996 -184067536 - MIR SINE MIR -81 127 36 339 328 90 25 chr5 19018327 19018528 -184067004 + MIR SINE MIR 20 233 -29 237 65 0 0 chr5 19019438 19019469 -184066063 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3495 219 55 32 chr5 19020020 19020118 -184065414 - L1MD1 LINE L1 -3 6633 6539 1291 261 19 11 chr5 19020118 19020489 -184065043 - MLT1A2 LTR MaLR 0 374 1 3495 219 55 32 chr5 19020489 19022291 -184063241 - L1MD1 LINE L1 -97 6539 4654 1750 164 31 65 chr5 19022290 19022627 -184062905 - L1MD1 LINE L1 -4582 1958 1638 * 997 69 0 0 chr5 19022627 19022758 -184062774 - L1PB1 LINE L1 -1 6150 6020 1750 164 31 65 chr5 19022758 19022866 -184062666 - L1MD1 LINE L1 -4902 1638 1528 1682 194 66 17 chr5 19022868 19023232 -184062300 - MLT2D LTR ERVL -40 480 1 3841 243 56 21 chr5 19023232 19024513 -184061019 - L1MD1 LINE L1 -5038 1502 19 35 24 0 0 chr5 19025085 19025127 -184060405 + AT_rich Low_complexity Low_complexity 1 42 0 32 0 0 0 chr5 19025156 19025188 -184060344 + AT_rich Low_complexity Low_complexity 1 32 0 278 249 27 141 chr5 19025312 19025497 -184060035 - MIR SINE MIR -79 183 20 4264 276 98 56 chr5 19025763 19027579 -184057953 + L1MEc LINE L1 82 1821 -4394 2256 96 13 10 chr5 19027579 19027881 -184057651 + AluSc SINE Alu 1 303 -6 4264 276 98 56 chr5 19027881 19028938 -184056594 + L1MEc LINE L1 1821 2833 -3382 2235 153 11 0 chr5 19028938 19029298 -184056234 + MER47A DNA MER2_type 1 364 -2 4264 276 98 56 chr5 19029298 19029972 -184055560 + L1MEc LINE L1 2833 3478 -2737 386 20 0 0 chr5 19029972 19030023 -184055509 + L1PA2 LINE L1 6103 6153 -2 4264 276 98 56 chr5 19030023 19031182 -184054350 + L1MEc LINE L1 3478 4919 -1296 679 200 0 13 chr5 19031277 19031432 -184054100 + L1MB8 LINE L1 6025 6177 -1 1359 273 99 13 chr5 19031447 19031913 -184053619 + L1MEc LINE L1 233 738 -5658 2946 207 39 12 chr5 19031933 19032681 -184052851 - L1M4 LINE L1 -981 5165 4398 26018 31 0 0 chr5 19032683 19036604 -184048928 - L1PA3 LINE L1 -3 6152 2233 14834 56 3 4 chr5 19036600 19038553 -184046979 - L1PA3 LINE L1 -4187 1959 9 868 193 0 0 chr5 19038562 19038759 -184046773 - L1M4 LINE L1 -1717 4429 4233 * 1244 224 36 11 chr5 19038754 19039245 -184046287 + L1ME1 LINE L1 5088 5594 -572 461 247 16 35 chr5 19039249 19039874 -184045658 + (TATATG)n Simple_repeat Simple_repeat 1 612 0 468 245 0 33 chr5 19039893 19040077 -184045455 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 310 268 0 62 chr5 19040101 19040198 -184045334 + L1MC4 LINE L1 6615 6705 -1337 306 337 0 0 chr5 19040141 19040230 -184045302 - L1MC4 LINE L1 -1340 6702 6614 * 212 220 20 0 chr5 19040231 19040281 -184045251 + (TA)n Simple_repeat Simple_repeat 1 51 0 1524 227 79 47 chr5 19040281 19040496 -184045036 + L1ME1 LINE L1 5613 5820 -346 476 32 16 0 chr5 19040496 19040558 -184044974 + (CA)n Simple_repeat Simple_repeat 2 64 0 1524 227 79 47 chr5 19040558 19040874 -184044658 + L1ME1 LINE L1 5820 6161 -5 2968 225 54 53 chr5 19041523 19042754 -184042778 + L1ME1 LINE L1 4021 5253 -913 3684 142 18 5 chr5 19042754 19043379 -184042153 + L1PB4 LINE L1 5510 6142 -14 2968 225 54 53 chr5 19043379 19044290 -184041242 + L1ME1 LINE L1 5253 6161 -5 565 207 49 0 chr5 19044300 19044464 -184041068 + L1 LINE L1 2269 2440 -3706 45 75 0 0 chr5 19044839 19044933 -184040599 + AT_rich Low_complexity Low_complexity 1 94 0 1616 154 49 10 chr5 19046347 19046653 -184038879 - MER46B DNA MER2_type 0 236 44 210 37 0 0 chr5 19047020 19047047 -184038485 + (TG)n Simple_repeat Simple_repeat 2 28 0 1335 256 62 41 chr5 19048066 19048205 -184037327 + MER74B LTR ERVL 58 193 -429 2325 95 0 0 chr5 19048205 19048500 -184037032 + AluSc SINE Alu 1 295 -14 1335 256 62 41 chr5 19048500 19048848 -184036684 + MER74B LTR ERVL 193 555 -67 1844 214 36 42 chr5 19048947 19049077 -184036455 + MLT1D LTR MaLR 1 130 -375 1823 146 93 74 chr5 19049077 19049425 -184036107 + MSTB LTR MaLR 1 360 -66 2096 142 0 0 chr5 19049425 19049721 -184035811 + AluSq SINE Alu 1 296 -17 1823 146 93 74 chr5 19049721 19049790 -184035742 + MSTB LTR MaLR 360 426 0 1844 214 36 42 chr5 19049790 19050154 -184035378 + MLT1D LTR MaLR 130 492 -13 389 268 32 24 chr5 19051745 19051868 -184033664 + MIR3 SINE MIR 67 190 -18 2154 176 5 17 chr5 19053384 19053741 -184031791 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 19053741 19053766 -184031766 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 19053766 19053818 -184031714 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 19053819 19054531 -184031001 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 19054608 19054739 -184030793 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 19054740 19055199 -184030333 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 19055668 19055787 -184029745 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 19055928 19056443 -184029089 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 19056443 19056745 -184028787 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 19056745 19056907 -184028625 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 19056916 19062243 -184023289 + L1M2 LINE L1 4 5525 -803 2016 172 36 33 chr5 19062243 19062793 -184022739 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 19062793 19062899 -184022633 + L1M2 LINE L1 5521 5626 -856 * 10347 162 20 7 chr5 19062894 19063706 -184021826 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 19063706 19064109 -184021423 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 19064109 19066353 -184019179 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 19066353 19066808 -184018724 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 19066808 19066855 -184018677 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 19067292 19067606 -184017926 - AluSx SINE Alu 0 312 1 492 296 26 16 chr5 19068042 19068231 -184017301 + LTR16C LTR ERVL 301 491 0 477 280 0 0 chr5 19068610 19068710 -184016822 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 19068727 19068750 -184016782 + AT_rich Low_complexity Low_complexity 1 23 0 2486 65 0 3 chr5 19068852 19069161 -184016371 - AluY SINE Alu -3 308 1 2266 81 3 0 chr5 19071642 19071948 -184013584 + AluSp SINE Alu 1 307 0 1263 238 59 0 chr5 19073181 19073501 -184012031 + MER58B DNA MER1_type 1 339 -2 2293 169 24 10 chr5 19073825 19074240 -184011292 + MSTB LTR MaLR 1 421 -5 568 314 207 5 chr5 19074246 19074632 -184010900 + L2 LINE L2 2199 2662 -652 2251 185 114 67 chr5 19075796 19076585 -184008947 + LTR1B LTR ERV1 1 826 0 366 264 32 0 chr5 19077581 19077706 -184007826 + GA-rich Low_complexity Low_complexity 1 129 0 310 270 133 60 chr5 19077709 19077942 -184007590 + L1MCa LINE L1 2229 2478 -3948 323 186 76 25 chr5 19078137 19078255 -184007277 - Charlie1 DNA MER1_type 0 2761 2638 * 1508 209 103 2 chr5 19078254 19078653 -184006879 - Charlie1 DNA MER1_type -1746 1015 576 836 233 30 34 chr5 19078653 19078979 -184006553 - MER92B LTR ERV1 -2 634 94 254 188 16 16 chr5 19078983 19079047 -184006485 + MER58B DNA MER1_type 278 341 0 339 271 17 25 chr5 19079774 19079892 -184005640 - L2 LINE L2 -5 3308 3192 22 0 0 0 chr5 19080024 19080046 -184005486 + AT_rich Low_complexity Low_complexity 1 22 0 2139 151 64 25 chr5 19080631 19081035 -184004497 - MSTA LTR MaLR -4 424 5 1405 152 12 4 chr5 19081581 19081838 -184003694 - L1M2 LINE L1 -718 5573 5315 923 145 6 0 chr5 19081841 19082013 -184003519 + CT-rich Low_complexity Low_complexity 4 176 0 707 218 64 5 chr5 19082252 19082488 -184003044 + L1MEc LINE L1 2055 2269 -4157 285 259 19 19 chr5 19082500 19082608 -184002924 + (TA)n Simple_repeat Simple_repeat 1 108 0 189 281 0 85 chr5 19082619 19082670 -184002862 - MIR SINE MIR -147 115 72 2571 108 3 13 chr5 19082670 19083049 -184002483 - THE1C LTR MaLR 0 375 1 189 281 0 85 chr5 19083049 19083079 -184002453 - MIR SINE MIR -190 72 41 2042 146 66 32 chr5 19084231 19084747 -184000785 - MLT2A2 LTR ERVL 0 554 1 1815 166 26 55 chr5 19084892 19085277 -184000255 - MLT1B LTR MaLR -16 374 1 195 191 71 0 chr5 19085412 19085454 -184000078 - L2 LINE L2 -230 3042 2998 1012 312 44 21 chr5 19085473 19085718 -183999814 - L2 LINE L2 -10 3303 3065 2015 142 95 12 chr5 19085718 19086127 -183999405 - MER65A LTR ERV1 0 445 3 1012 312 44 21 chr5 19086127 19086462 -183999070 - L2 LINE L2 -248 3065 2712 884 180 115 0 chr5 19086469 19086652 -183998880 + MER3 DNA MER1_type 6 209 0 374 299 149 5 chr5 19086660 19086861 -183998671 - L2 LINE L2 -617 2697 2468 324 278 0 21 chr5 19087262 19087359 -183998173 - L1ME LINE L1 -463 5707 5613 1872 199 5 39 chr5 19087361 19087745 -183997787 + MLT2D LTR ERVL 1 372 -42 450 0 0 0 chr5 19087745 19087795 -183997737 + (CA)n Simple_repeat Simple_repeat 2 51 0 1872 199 5 39 chr5 19087795 19087822 -183997710 + MLT2D LTR ERVL 372 398 -16 299 364 19 6 chr5 19087869 19088031 -183997501 - L1ME LINE L1 -641 5525 5362 453 337 105 32 chr5 19088283 19088903 -183996629 - L1ME LINE L1 -1098 5048 4384 237 121 0 0 chr5 19089193 19089226 -183996306 - MLT1I LTR MaLR -8 401 369 296 278 56 16 chr5 19089466 19089592 -183995940 - MLT1J2 LTR MaLR -319 131 1 355 231 152 63 chr5 19089597 19089900 -183995632 - L1ME LINE L1 -2154 3992 3663 328 330 155 10 chr5 19089987 19090187 -183995345 - L1ME LINE L1 -2717 3429 3201 274 343 43 36 chr5 19090428 19090568 -183994964 + MIR3 SINE MIR 55 195 -13 307 252 67 17 chr5 19090595 19090714 -183994818 + MLT1I LTR MaLR 20 144 -265 1379 179 67 22 chr5 19091608 19091920 -183993612 + L1MB8 LINE L1 5853 6178 0 2236 179 20 20 chr5 19092215 19092611 -183992921 + MSTD LTR MaLR 1 396 0 7843 232 29 21 chr5 19092613 19094333 -183991199 + MSTD-int LTR MaLR 2 1735 0 2276 178 18 25 chr5 19094333 19094731 -183990801 + MSTD LTR MaLR 1 395 -1 2232 106 3 3 chr5 19095009 19095310 -183990222 + AluSg SINE Alu 1 301 -9 462 278 80 6 chr5 19096139 19096315 -183989217 + MIR3 SINE MIR 20 208 0 1856 160 65 9 chr5 19097163 19097488 -183988044 - MER61A LTR ERV1 0 343 1 752 248 96 26 chr5 19097584 19097669 -183987863 - MIR SINE MIR -7 255 177 2094 211 54 66 chr5 19097669 19098243 -183987289 + MLT1F1 LTR MaLR 1 567 0 752 248 96 26 chr5 19098243 19098387 -183987145 - MIR SINE MIR -85 177 10 1446 189 3 40 chr5 19099658 19099959 -183985573 + AluJb SINE Alu 3 292 -20 646 221 41 67 chr5 19100681 19100876 -183984656 - MLT1E2 LTR MaLR -377 249 60 267 280 153 25 chr5 19101245 19101363 -183984169 + MIR SINE MIR 129 261 -1 325 358 37 30 chr5 19101423 19101557 -183983975 + L2 LINE L2 3138 3272 0 360 279 23 0 chr5 19101579 19101665 -183983867 - Charlie8 DNA MER1_type -2329 88 1 270 226 71 24 chr5 19103112 19103196 -183982336 + MLT1G LTR MaLR 33 120 -435 470 300 3 6 chr5 19103486 19103644 -183981888 + MLT1G LTR MaLR 109 274 -314 751 333 110 25 chr5 19103667 19104229 -183981303 + L2 LINE L2 2225 2834 -480 248 286 0 0 chr5 19104329 19104413 -183981119 + L1MC4 LINE L1 6619 6702 -1340 489 321 0 21 chr5 19104518 19104658 -183980874 + L2 LINE L2 3136 3272 0 2393 87 7 0 chr5 19105287 19105587 -183979945 - AluSc SINE Alu -7 302 1 277 283 121 42 chr5 19105588 19105754 -183979778 - L2 LINE L2 -987 2327 2149 295 270 111 32 chr5 19106680 19106806 -183978726 - MER5B DNA MER1_type 0 178 43 741 65 0 0 chr5 19107156 19107264 -183978268 + (TC)n Simple_repeat Simple_repeat 2 109 0 1619 179 8 0 chr5 19107264 19107521 -183978011 - AluJb SINE Alu -48 264 6 273 89 0 0 chr5 19108991 19109036 -183976496 + (A)n Simple_repeat Simple_repeat 1 45 0 353 331 0 6 chr5 19109361 19109539 -183975993 + (TA)n Simple_repeat Simple_repeat 2 178 0 2146 89 0 0 chr5 19109625 19109894 -183975638 + AluSg SINE Alu 36 304 -6 2169 118 0 26 chr5 19110313 19110618 -183974914 - AluSx SINE Alu -15 297 1 2622 134 11 30 chr5 19111246 19111687 -183973845 - L1MB3 LINE L1 -7 6176 5744 4834 157 36 33 chr5 19111722 19112438 -183973094 - pTR5 LTR ERV1 -238 2200 1488 203 77 0 26 chr5 19112438 19112477 -183973055 + (CGGG)n Simple_repeat Simple_repeat 3 40 0 4834 157 36 33 chr5 19112477 19112951 -183972581 - pTR5 LTR ERV1 -950 1488 281 268 232 18 0 chr5 19112955 19113011 -183972521 - U6 snRNA snRNA -49 58 2 716 168 6 0 chr5 19113480 19113653 -183971879 + (ATG)n Simple_repeat Simple_repeat 1 174 0 402 253 0 0 chr5 19113661 19113756 -183971776 - MIR SINE MIR -16 246 152 7688 48 0 0 chr5 19113756 19115114 -183970418 - L1PA6 LINE L1 0 6154 4804 17535 49 2 1 chr5 19115114 19117282 -183968250 + L1PA6 LINE L1 2631 4802 -1344 316 286 67 19 chr5 19117282 19117387 -183968145 - MIR SINE MIR -103 159 50 684 294 68 0 chr5 19118627 19118848 -183966684 + MIR SINE MIR 1 236 -26 216 0 0 0 chr5 19119297 19119321 -183966211 + (GA)n Simple_repeat Simple_repeat 1 24 0 461 269 90 6 chr5 19119767 19119934 -183965598 - MIR SINE MIR -53 209 29 433 252 37 55 chr5 19120998 19121412 -183964120 + L1MC4 LINE L1 7411 8042 0 194 244 0 0 chr5 19121651 19121696 -183963836 + MIR SINE MIR 68 112 -150 1986 130 3 3 chr5 19123164 19123449 -183962083 - AluSx SINE Alu -24 288 4 1942 167 3 0 chr5 19124319 19124625 -183960907 - AluJo SINE Alu -5 307 1 1705 139 53 47 chr5 19124916 19125255 -183960277 + MER4A LTR ERV1 1 341 -323 2176 98 17 7 chr5 19125257 19125552 -183959980 + AluSg SINE Alu 1 298 -12 607 163 195 65 chr5 19125570 19125830 -183959702 + MER4C LTR ERV1 157 457 -8 915 146 0 7 chr5 19126616 19126753 -183958779 - U8 snRNA snRNA 0 136 1 649 304 5 27 chr5 19127852 19128076 -183957456 - MIR SINE MIR -4 258 40 22 0 0 0 chr5 19128163 19128185 -183957347 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr5 19129367 19129389 -183956143 + (TG)n Simple_repeat Simple_repeat 1 22 0 372 211 167 26 chr5 19129448 19129562 -183955970 + MER96 DNA MER1_type? 32 161 -14 3556 94 2 13 chr5 19130112 19130570 -183954962 - MLT2A2 LTR ERVL 0 453 1 580 253 36 24 chr5 19130744 19130910 -183954622 + MER5B DNA MER1_type 1 168 -10 298 253 48 0 chr5 19132097 19132180 -183953352 + MIR SINE MIR 176 262 0 358 305 13 20 chr5 19132284 19132435 -183953097 - MIR SINE MIR -24 238 89 207 0 0 0 chr5 19133266 19133289 -183952243 + (TG)n Simple_repeat Simple_repeat 2 24 0 480 111 0 0 chr5 19135071 19135143 -183950389 + (TA)n Simple_repeat Simple_repeat 2 73 0 253 224 0 0 chr5 19135214 19135263 -183950269 - L1ME4a LINE L1 -106 6015 5967 4198 180 51 28 chr5 19136671 19137395 -183948137 - L1MB2 LINE L1 -4 6167 5461 2265 131 60 23 chr5 19137395 19137746 -183947786 - THE1B LTR MaLR 0 364 1 4198 180 51 28 chr5 19137746 19137876 -183947656 - L1MB2 LINE L1 -710 5461 5335 279 0 0 0 chr5 19137876 19137907 -183947625 + (TG)n Simple_repeat Simple_repeat 2 32 0 4198 180 51 28 chr5 19137907 19138505 -183947027 - L1MB2 LINE L1 -836 5335 4677 336 379 17 34 chr5 19138702 19138879 -183946653 + MIR3 SINE MIR 32 205 -3 367 137 27 0 chr5 19138992 19139065 -183946467 + (TA)n Simple_repeat Simple_repeat 2 76 0 299 223 6 3 chr5 19139966 19140093 -183945439 + MER5A DNA MER1_type 4 188 -1 396 0 0 0 chr5 19140678 19140722 -183944810 + (TG)n Simple_repeat Simple_repeat 2 45 0 1989 197 69 17 chr5 19141303 19141449 -183944083 - L1MD3 LINE L1 -8 7987 7850 2727 155 7 0 chr5 19141449 19141874 -183943658 + MSTC LTR MaLR 1 428 0 1989 197 69 17 chr5 19141874 19142251 -183943281 - L1MD3 LINE L1 -145 7850 7437 16073 208 29 18 chr5 19142388 19149104 -183936428 - L1PA15 LINE L1 -3 6813 6 783 295 115 25 chr5 19150001 19150167 -183935365 + LTR16C LTR ERVL 91 241 -250 1165 161 19 5 chr5 19150167 19150372 -183935160 + MER3 DNA MER1_type 1 208 -1 783 295 115 25 chr5 19150372 19150571 -183934961 + LTR16C LTR ERVL 241 489 -2 2479 55 14 0 chr5 19151052 19151345 -183934187 - AluSp SINE Alu -16 297 1 1020 276 77 8 chr5 19151890 19152397 -183933135 + L1ME3A LINE L1 4177 4718 -1428 1386 248 31 26 chr5 19152552 19152824 -183932708 + L1ME3A LINE L1 4923 5192 -978 2258 121 98 3 chr5 19152824 19153213 -183932319 - MSTA LTR MaLR -2 426 1 1386 248 31 26 chr5 19153213 19153689 -183931843 + L1ME3A LINE L1 5192 5672 -498 186 43 0 0 chr5 19153776 19153799 -183931733 + (TG)n Simple_repeat Simple_repeat 2 24 0 307 209 60 0 chr5 19153848 19153982 -183931550 + (TA)n Simple_repeat Simple_repeat 2 143 0 1351 203 161 5 chr5 19153983 19154388 -183931144 + L1ME3A LINE L1 5660 6127 -43 324 321 7 15 chr5 19155355 19155492 -183930040 + L1M3c LINE L1 1 136 -6005 * 559 343 40 17 chr5 19155461 19155863 -183929669 + L1M3c LINE L1 13 423 -5718 328 254 55 0 chr5 19156020 19156130 -183929402 + L1M3c LINE L1 814 929 -5212 3747 144 80 38 chr5 19156131 19156956 -183928576 + L1MA10 LINE L1 5472 6331 -3 1858 181 13 10 chr5 19160141 19160450 -183925082 - AluJo SINE Alu -2 310 1 1311 172 65 8 chr5 19160654 19160979 -183924553 - Tigger4(Zombi) DNA MER2_type 0 2731 12 757 138 60 0 chr5 19161277 19161393 -183924139 + FLAM_C SINE Alu 2 124 -9 339 143 0 0 chr5 19161431 19161494 -183924038 + L1MA5A LINE L1 4408 4470 -1676 6401 140 12 15 chr5 19161494 19163360 -183922172 + L1MA5A LINE L1 4435 6291 -6 852 313 60 13 chr5 19164383 19164837 -183920695 - LTR33 LTR ERVL -8 513 39 205 238 95 16 chr5 19166685 19166748 -183918784 + L2 LINE L2 3155 3222 -50 258 267 22 11 chr5 19167061 19167151 -183918381 + MER117 DNA MER1_type 1 91 -106 1140 176 63 4 chr5 19168791 19169029 -183916503 - L1MA4 LINE L1 -11 6289 6038 1356 153 18 0 chr5 19169048 19169270 -183916262 - L1PA16 LINE L1 -9 6157 5932 417 161 86 0 chr5 19169270 19169363 -183916169 - L1MA4 LINE L1 -255 6045 5945 * 1681 181 27 6 chr5 19169361 19169726 -183915806 + L1 LINE L1 4616 4988 -1158 1665 211 48 4 chr5 19169727 19170182 -183915350 - Charlie4a DNA MER1_type 0 508 34 2453 81 0 3 chr5 19170182 19170491 -183915041 - AluSx SINE Alu -4 308 1 2278 118 16 16 chr5 19170517 19170890 -183914642 - THE1C LTR MaLR 0 375 3 394 270 100 91 chr5 19171228 19171469 -183914063 - L2 LINE L2 0 3272 3030 319 368 59 30 chr5 19171553 19171993 -183913539 - L2 LINE L2 -421 2893 2441 449 332 111 9 chr5 19172067 19172410 -183913122 - L2 LINE L2 -1209 2105 1728 1374 239 116 64 chr5 19172797 19173390 -183912142 - MLT1E3 LTR MaLR 0 624 1 912 284 61 19 chr5 19173590 19173949 -183911583 - LTR16B LTR ERVL -81 383 10 593 14 0 0 chr5 19174511 19174583 -183910949 - L1P LINE L1 -3665 2481 2410 290 263 13 0 chr5 19174879 19174955 -183910577 + Charlie8 DNA MER1_type 2341 2417 0 254 340 70 49 chr5 19175083 19175268 -183910264 - L2 LINE L2 -130 3183 2995 318 223 58 29 chr5 19176522 19176609 -183908923 + L1PB4 LINE L1 6046 6138 -28 185 0 40 0 chr5 19176609 19176634 -183908898 + (TA)n Simple_repeat Simple_repeat 2 27 0 318 223 58 29 chr5 19176634 19176649 -183908883 + L1PB4 LINE L1 6138 6151 -15 382 193 211 0 chr5 19176701 19176815 -183908717 - LTR16C LTR ERVL -1 490 353 408 265 66 13 chr5 19176914 19177065 -183908467 - L2 LINE L2 0 3313 3155 1061 202 27 62 chr5 19177077 19177413 -183908119 + MER33 DNA MER1_type 1 324 0 397 224 31 20 chr5 19177439 19177537 -183907995 + MER5A DNA MER1_type 14 112 -77 3648 287 83 68 chr5 19177726 19178830 -183906702 - L2 LINE L2 -262 3051 1914 2204 126 96 18 chr5 19178830 19179227 -183906305 - MSTA LTR MaLR 0 428 1 3648 287 83 68 chr5 19179227 19179924 -183905608 - L2 LINE L2 -1399 1914 1229 249 303 83 7 chr5 19179926 19180071 -183905461 + MLT1J LTR MaLR 1 156 -355 387 0 0 0 chr5 19180188 19180231 -183905301 + (TA)n Simple_repeat Simple_repeat 1 43 0 225 204 20 10 chr5 19180312 19180410 -183905122 + (TA)n Simple_repeat Simple_repeat 2 100 0 755 277 103 5 chr5 19180466 19180913 -183904619 + MLT1G1 LTR MaLR 84 595 0 273 302 108 35 chr5 19181064 19181352 -183904180 + MLT1G1-int LTR MaLR 255 563 -808 364 263 30 126 chr5 19181923 19182229 -183903303 + MLT1G1-int LTR MaLR 1032 1297 -74 2941 160 0 16 chr5 19182229 19182722 -183902810 + MER66B LTR ERV1 1 485 -1 364 263 30 126 chr5 19182722 19182787 -183902745 + MLT1G1-int LTR MaLR 1297 1367 -4 1097 250 44 14 chr5 19182787 19183083 -183902449 + MLT1G1 LTR MaLR 1 305 -290 458 289 7 14 chr5 19183144 19183286 -183902246 + MLT1G1 LTR MaLR 453 593 -2 489 312 69 14 chr5 19183299 19183575 -183901957 - L1MEc LINE L1 -4831 1479 1189 262 154 108 0 chr5 19183636 19183701 -183901831 + L1M4c LINE L1 1266 1337 -5047 249 216 102 0 chr5 19183728 19183816 -183901716 - L1MEc LINE L1 -5123 996 900 304 324 9 0 chr5 19183940 19184051 -183901481 - L1MEc LINE L1 -5448 671 560 464 317 94 64 chr5 19184148 19184583 -183900949 - L1MEc LINE L1 -5663 456 9 185 0 40 0 chr5 19185514 19185539 -183899993 + (TAA)n Simple_repeat Simple_repeat 2 27 0 946 49 16 44 chr5 19186096 19186130 -183899402 + (TTTC)n Simple_repeat Simple_repeat 1 211 0 946 49 16 44 chr5 19186130 19186313 -183899219 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 668 204 0 0 chr5 19186398 19186511 -183899021 - FLAM_A SINE Alu -29 113 1 378 0 0 0 chr5 19186690 19186732 -183898800 + (TA)n Simple_repeat Simple_repeat 1 42 0 1776 161 0 0 chr5 19186785 19187059 -183898473 + AluSx SINE Alu 38 311 -1 770 189 6 47 chr5 19187524 19187716 -183897816 + MLT2C2 LTR ERVL 214 464 0 216 0 0 0 chr5 19187748 19187772 -183897760 + (CA)n Simple_repeat Simple_repeat 2 25 0 204 259 9 17 chr5 19189111 19189227 -183896305 + GA-rich Low_complexity Low_complexity 1 115 0 19437 156 105 14 chr5 19189296 19194788 -183890744 + L1M1 LINE L1 13 6028 -1537 2104 94 0 4 chr5 19194788 19195063 -183890469 + AluSq SINE Alu 40 313 0 2639 171 63 4 chr5 19195068 19195530 -183890002 + MER41D LTR ERV1 63 551 -6 1233 285 93 2 chr5 19195553 19195970 -183889562 - L2 LINE L2 -730 2584 2130 216 322 76 8 chr5 19195963 19196081 -183889451 - MIR SINE MIR -89 173 48 * 279 317 110 37 chr5 19196692 19196856 -183888676 - MIR3 SINE MIR -1 207 32 476 284 85 0 chr5 19197097 19197238 -183888294 + MIR SINE MIR 110 262 0 202 321 51 51 chr5 19197256 19197393 -183888139 + MIR SINE MIR 40 143 -65 24 77 0 0 chr5 19199031 19199083 -183886449 + AT_rich Low_complexity Low_complexity 1 52 0 638 106 10 0 chr5 19199084 19199188 -183886344 - L1PA13 LINE L1 -5 6158 6054 1820 250 88 20 chr5 19200081 19201262 -183884270 + L1MEc LINE L1 1846 3066 -3149 1128 266 155 12 chr5 19201446 19202051 -183883481 + L1MEc LINE L1 3333 4024 -2191 33 0 0 23 chr5 19202071 19202091 -183883441 + AT_rich Low_complexity Low_complexity 1 20 -23 1738 176 0 37 chr5 19202091 19202415 -183883117 - AluSx SINE Alu 0 312 1 33 0 0 23 chr5 19202415 19202438 -183883094 + AT_rich Low_complexity Low_complexity 20 43 0 1355 258 74 27 chr5 19202473 19203027 -183882505 + L1MEc LINE L1 4608 5187 -1028 2025 156 106 14 chr5 19203280 19203697 -183881835 - MLT1D LTR MaLR -10 495 41 1944 136 3 20 chr5 19205821 19206122 -183879410 - AluSq SINE Alu -17 296 1 546 284 124 63 chr5 19206622 19206953 -183878579 + L2 LINE L2 2963 3313 0 314 222 19 28 chr5 19207535 19207643 -183877889 + (TA)n Simple_repeat Simple_repeat 2 108 0 3587 26 0 0 chr5 19208437 19208860 -183876672 - L1PA2 LINE L1 0 6155 5733 408 71 0 0 chr5 19208937 19208993 -183876539 + (TG)n Simple_repeat Simple_repeat 2 57 0 1677 167 70 19 chr5 19209330 19209701 -183875831 + MLT1B LTR MaLR 1 390 0 232 220 20 0 chr5 19209790 19209840 -183875692 + MLT1H LTR MaLR 73 123 -426 * 598 314 29 41 chr5 19209834 19210165 -183875367 + LTR33 LTR ERVL 5 357 -164 2042 122 74 14 chr5 19210165 19210518 -183875014 + THE1C LTR MaLR 2 375 0 598 314 29 41 chr5 19210518 19210630 -183874902 + LTR33 LTR ERVL 357 469 -52 180 0 0 0 chr5 19210743 19210763 -183874769 + (TGG)n Simple_repeat Simple_repeat 3 22 0 830 235 181 91 chr5 19211132 19211191 -183874341 + MLT1H LTR MaLR 1 53 -496 2371 116 11 30 chr5 19211191 19211562 -183873970 - THE1B LTR MaLR 0 364 1 830 235 181 91 chr5 19211562 19211955 -183873577 + MLT1H LTR MaLR 53 534 -15 353 324 7 21 chr5 19211976 19212121 -183873411 - MLT1J LTR MaLR -141 370 228 3593 71 9 4 chr5 19212490 19212957 -183872575 - MER41A LTR ERV1 -85 469 1 13170 86 23 4 chr5 19212957 19214775 -183870757 - MER41A-int LTR ERV1 -2 5944 4092 * 14110 124 84 42 chr5 19214757 19218303 -183867229 - MER41A-int LTR ERV1 -2189 3757 1 21 0 0 0 chr5 19218432 19218453 -183867079 + AT_rich Low_complexity Low_complexity 1 21 0 390 237 52 10 chr5 19218816 19218913 -183866619 - MER5C DNA MER1_type -204 120 20 683 279 66 61 chr5 19219036 19219413 -183866119 - LTR16C LTR ERVL -15 476 98 22 0 0 0 chr5 19219992 19220014 -183865518 + AT_rich Low_complexity Low_complexity 1 22 0 1820 130 61 66 chr5 19220346 19220723 -183864809 + THE1C LTR MaLR 1 375 0 244 217 174 0 chr5 19220998 19221067 -183864465 - MIR SINE MIR -76 186 106 312 294 81 36 chr5 19221604 19222101 -183863431 - L1M4 LINE L1 -1527 4619 4101 757 129 0 0 chr5 19223669 19223785 -183861747 + AluY SINE Alu 194 309 -2 2434 90 0 0 chr5 19223934 19224244 -183861288 - AluSx SINE Alu -2 310 1 248 292 136 58 chr5 19225234 19225542 -183859990 + MLT1K LTR MaLR 210 541 -47 24 0 0 0 chr5 19225564 19225588 -183859944 + AT_rich Low_complexity Low_complexity 1 24 0 249 174 0 0 chr5 19225614 19225660 -183859872 + L2 LINE L2 2998 3043 -229 238 255 0 0 chr5 19226423 19226474 -183859058 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 314 74 35 chr5 19226729 19227012 -183858520 - L2 LINE L2 -1074 2240 1947 3970 221 46 25 chr5 19227018 19228430 -183857102 + L1M4 LINE L1 3119 4574 -2991 2312 111 19 6 chr5 19228461 19228820 -183856712 + L1PB1 LINE L1 5788 6151 0 1577 329 86 32 chr5 19228839 19229981 -183855551 - L2 LINE L2 -1362 1952 750 396 269 186 84 chr5 19229981 19230315 -183855217 - L2 LINE L2 -2825 489 122 364 337 151 12 chr5 19231406 19231572 -183853960 + MIR3 SINE MIR 9 197 -11 309 293 84 19 chr5 19231630 19231845 -183853687 + L1ME LINE L1 5383 5611 -510 395 91 0 15 chr5 19231931 19231997 -183853535 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 21 0 0 0 chr5 19232152 19232173 -183853359 + AT_rich Low_complexity Low_complexity 1 21 0 193 330 50 20 chr5 19232189 19232289 -183853243 - L2 LINE L2 0 3313 3211 243 0 0 0 chr5 19232364 19232391 -183853141 + (T)n Simple_repeat Simple_repeat 1 27 0 564 332 19 5 chr5 19232391 19232596 -183852936 - L2 LINE L2 -251 3062 2855 1044 267 26 114 chr5 19232710 19233351 -183852181 - L2 LINE L2 -458 2856 2272 1210 281 53 41 chr5 19234326 19234814 -183850718 - MLT1K LTR MaLR -4 584 91 1439 187 79 50 chr5 19234817 19235196 -183850336 - MLT1B LTR MaLR 0 390 1 446 318 46 0 chr5 19235821 19235994 -183849538 + LTR16A LTR ERVL 1 181 -269 248 212 91 15 chr5 19236011 19236143 -183849389 + L1M4 LINE L1 5651 5792 -1773 3342 311 61 21 chr5 19236503 19238279 -183847253 - HERV16 LTR ERVL -3085 1911 1 1050 312 122 15 chr5 19238285 19238686 -183846846 - LTR16A LTR ERVL -6 444 1 1098 120 0 13 chr5 19238724 19238882 -183846650 - AluSg/x SINE Alu -1 311 156 338 308 68 27 chr5 19238925 19239217 -183846315 - L1M4 LINE L1 -5128 1414 1111 27 0 0 0 chr5 19239602 19239629 -183845903 + AT_rich Low_complexity Low_complexity 1 27 0 1456 124 42 0 chr5 19239633 19239874 -183845658 - L1MA5A LINE L1 -9 6288 6038 397 227 0 0 chr5 19239795 19239883 -183845649 - L1MA4A LINE L1 -185 6118 6031 417 312 108 19 chr5 19239986 19240143 -183845389 + MER91A DNA MER1_type 1 171 -25 523 347 134 48 chr5 19240940 19241297 -183844235 + L2 LINE L2 2877 3264 -8 1266 163 30 72 chr5 19241389 19241653 -183843879 + AluJo SINE Alu 1 253 -59 7697 204 60 6 chr5 19241879 19244740 -183840792 - L1MB4 LINE L1 -2 6676 3659 1999 161 3 0 chr5 19244779 19245090 -183840442 - AluJb SINE Alu 0 312 1 4806 226 99 20 chr5 19245097 19246964 -183838568 - L1MB4 LINE L1 -3773 2871 802 381 282 69 42 chr5 19247310 19247526 -183838006 - L1MB4 LINE L1 -6320 222 1 198 0 0 0 chr5 19247533 19247555 -183837977 + (T)n Simple_repeat Simple_repeat 1 22 0 1186 171 60 51 chr5 19248735 19249043 -183836489 - L1PB4 LINE L1 -7 6149 5841 21 71 0 0 chr5 19251664 19251706 -183833826 + AT_rich Low_complexity Low_complexity 1 42 0 1606 171 193 11 chr5 19255103 19255465 -183830067 + MSTA LTR MaLR 1 428 0 8401 146 10 41 chr5 19255468 19256908 -183828624 + MSTA-int LTR MaLR 4 1399 -181 563 206 0 0 chr5 19257083 19257180 -183828352 - Tigger7 DNA MER2_type -1 2486 2390 1526 201 15 0 chr5 19257181 19257444 -183828088 - Tigger7 DNA MER2_type -2220 267 1 187 250 132 29 chr5 19257502 19257570 -183827962 + L2 LINE L2 3194 3268 -4 992 227 9 14 chr5 19257639 19257859 -183827673 + MER20 DNA MER1_type 1 219 0 1256 158 35 0 chr5 19260311 19260565 -183824967 - L1MA9 LINE L1 -6 6306 6044 25 90 0 0 chr5 19260693 19260760 -183824772 + AT_rich Low_complexity Low_complexity 1 67 0 223 250 0 0 chr5 19261557 19261601 -183823931 + polypurine Low_complexity Low_complexity 1 44 0 904 296 96 39 chr5 19262129 19262654 -183822878 + L2 LINE L2 2757 3311 -2 772 256 55 0 chr5 19262760 19262959 -183822573 - MER63A DNA MER1_type 0 210 1 374 345 9 0 chr5 19262981 19263094 -183822438 + MIR SINE MIR 36 149 -59 364 329 48 17 chr5 19263360 19263652 -183821880 - L1MEc LINE L1 -2469 3746 3446 207 162 0 0 chr5 19264281 19264318 -183821214 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 301 196 0 0 chr5 19264322 19264378 -183821154 - L1MC4 LINE L1 -1339 6703 6648 378 215 81 13 chr5 19264443 19264592 -183820940 - L1MEc LINE L1 -3784 2431 2273 330 280 82 48 chr5 19264884 19265091 -183820441 - L1MEc LINE L1 -4567 1829 1616 302 376 8 8 chr5 19265384 19265501 -183820031 - L2 LINE L2 -5 3308 3192 235 219 16 47 chr5 19265774 19265838 -183819694 - L1P LINE L1 -3276 2870 2809 497 271 54 50 chr5 19266004 19266284 -183819248 - MLT1J LTR MaLR 0 511 231 236 279 15 0 chr5 19266331 19266399 -183819133 - MLT1L LTR MaLR -342 273 205 1214 256 0 6 chr5 19267270 19267606 -183817926 - L1PB1 LINE L1 -1017 5129 4796 * 5882 107 9 0 chr5 19267599 19268550 -183816982 + L1PB1 LINE L1 5147 6104 -47 202 106 43 21 chr5 19268984 19269031 -183816501 + GA-rich Low_complexity Low_complexity 2 49 0 241 301 215 22 chr5 19269045 19269361 -183816171 - L2 LINE L2 -635 2679 2303 236 258 113 0 chr5 19269414 19269476 -183816056 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 19269788 19270007 -183815525 + MIR SINE MIR 2 235 -27 547 338 97 25 chr5 19270042 19270566 -183814966 - L2 LINE L2 -1225 2089 1528 383 242 20 10 chr5 19272638 19272737 -183812795 - MER103 DNA DNA -64 102 3 1996 118 4 0 chr5 19274233 19274496 -183811036 - AluSp SINE Alu -47 266 3 345 267 109 43 chr5 19274686 19275011 -183810521 + MLT1J2 LTR MaLR 1 448 -2 296 341 10 73 chr5 19275703 19275908 -183809624 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 19276988 19277038 -183808494 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 343 279 27 23 chr5 19277114 19277308 -183808224 + L1M4b LINE L1 -533 4294967217 -6359 730 164 62 69 chr5 19277384 19277553 -183807979 - MLT1A1 LTR MaLR 0 365 212 416 271 5 145 chr5 19278025 19278239 -183807293 + MER5A DNA MER1_type 3 186 -3 1280 232 42 10 chr5 19278981 19279364 -183806168 + MER114 LTR ERV 7 401 -247 895 311 37 63 chr5 19279431 19279894 -183805638 + L1M4b LINE L1 175 625 -5688 272 271 59 12 chr5 19279878 19279963 -183805569 + L1M4b LINE L1 985 1073 -5240 * 3229 219 33 7 chr5 19280172 19281006 -183804526 + L1M4b LINE L1 777 1783 -4530 42 20 0 0 chr5 19281055 19281104 -183804428 + AT_rich Low_complexity Low_complexity 1 49 0 417 188 0 0 chr5 19281104 19281189 -183804343 + (TA)n Simple_repeat Simple_repeat 2 86 0 246 276 23 0 chr5 19281190 19281277 -183804255 - L1MC4 LINE L1 -1339 6703 6615 307 173 0 0 chr5 19281282 19281334 -183804198 - L1MC4 LINE L1 -1339 6703 6652 957 218 120 61 chr5 19281642 19282010 -183803522 + MLT1G1 LTR MaLR 1 357 -185 786 196 5 43 chr5 19282465 19282649 -183802883 - MER5B DNA MER1_type 0 178 2 2647 158 22 16 chr5 19282771 19283219 -183802313 + LTR32 LTR ERVL 21 471 0 525 302 108 26 chr5 19283283 19283661 -183801871 + MLT1I LTR MaLR 1 409 0 1848 231 73 28 chr5 19284761 19285293 -183800239 - MER74A LTR ERVL -2 556 1 1423 257 70 23 chr5 19285369 19285844 -183799688 - MLT1F1 LTR MaLR 0 567 71 292 209 236 18 chr5 19286145 19286193 -183799339 + MER94 DNA DNA 1 37 -97 2566 107 6 11 chr5 19286193 19286559 -183798973 + THE1B LTR MaLR 1 364 0 292 209 236 18 chr5 19286559 19286620 -183798912 + MER94 DNA DNA 37 134 0 35434 35 19 1 chr5 19287243 19292799 -183792733 + L1PA3 LINE L1 13 5697 -458 1207 33 0 13 chr5 19293369 19293521 -183792011 + L1PA3 LINE L1 6006 6155 0 2381 94 0 0 chr5 19293957 19294254 -183791278 - AluY SINE Alu -14 297 1 236 231 22 22 chr5 19295062 19295153 -183790379 + MLT1H LTR MaLR 68 137 -272 1052 221 71 69 chr5 19295175 19295568 -183789964 + MSTD LTR MaLR 3 396 0 234 236 34 101 chr5 19295694 19295842 -183789690 + MLT1H LTR MaLR 405 542 -7 1469 210 25 33 chr5 19295994 19296356 -183789176 + MLT1A1 LTR MaLR 2 360 -5 5252 88 12 7 chr5 19296981 19297732 -183787800 + L1PA13 LINE L1 5408 6162 -1 183 353 140 7 chr5 19297881 19298017 -183787515 + L2 LINE L2 366 519 -2795 348 367 117 9 chr5 19298045 19298361 -183787171 - L2 LINE L2 -461 2853 2504 330 26 0 0 chr5 19299529 19299568 -183785964 + (TG)n Simple_repeat Simple_repeat 2 40 0 1227 213 62 58 chr5 19299972 19300437 -183785095 + MLT1C LTR MaLR 1 467 0 403 206 0 64 chr5 19300437 19300578 -183784954 + MER96B DNA MER1_type? 43 174 -243 225 0 0 0 chr5 19304059 19304084 -183781448 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1653 166 57 38 chr5 19305205 19305572 -183779960 - MLT1A2 LTR MaLR 0 374 1 255 230 14 54 chr5 19305595 19305669 -183779863 + L2 LINE L2 3025 3095 -177 1782 155 8 20 chr5 19305936 19306318 -183779214 - Tigger3(Golem) DNA MER2_type -1 3028 4 21 0 0 0 chr5 19306349 19306370 -183779162 + AT_rich Low_complexity Low_complexity 1 21 0 466 196 122 14 chr5 19306882 19307030 -183778502 + MER5C DNA MER1_type 127 290 -34 1006 170 100 5 chr5 19307447 19307647 -183777885 - MER20 DNA MER1_type 0 219 1 311 287 49 25 chr5 19307672 19307794 -183777738 - MIR SINE MIR -93 169 45 42153 36 0 3 chr5 19308011 19314218 -183771314 + L1PA3 LINE L1 1 6191 0 286 305 21 0 chr5 19314386 19314527 -183771005 - L1ME4a LINE L1 -229 5892 5749 182 363 62 0 chr5 19314583 19314663 -183770869 - MIR SINE MIR -40 222 138 2046 127 0 10 chr5 19315129 19315421 -183770111 + AluSx SINE Alu 22 310 -2 336 328 21 21 chr5 19315901 19316090 -183769442 - MLT1J LTR MaLR -92 419 231 1117 256 0 6 chr5 19317173 19317509 -183768023 - L1PB1 LINE L1 -1017 5129 4796 * 5577 109 5 0 chr5 19317502 19318455 -183767077 + L1PB1 LINE L1 5147 6104 -47 180 111 0 0 chr5 19318898 19318925 -183766607 + (GA)n Simple_repeat Simple_repeat 2 28 0 263 298 215 22 chr5 19318950 19319266 -183766266 - L2 LINE L2 -635 2679 2303 237 258 113 0 chr5 19319319 19319381 -183766151 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 19319694 19319913 -183765619 + MIR SINE MIR 2 235 -27 565 336 97 25 chr5 19319948 19320472 -183765060 - L2 LINE L2 -1225 2089 1528 350 237 21 10 chr5 19322541 19322638 -183762894 - MER103 DNA DNA -64 102 5 2032 113 4 0 chr5 19324136 19324401 -183761131 - AluSp SINE Alu -47 266 1 308 269 78 14 chr5 19324615 19324756 -183760776 + MLT1J2 LTR MaLR 34 183 -267 263 255 137 65 chr5 19324757 19324910 -183760622 + MLT1J2 LTR MaLR 285 448 -2 296 341 10 73 chr5 19325602 19325807 -183759725 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 19326887 19326937 -183758595 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 303 270 24 22 chr5 19327013 19327175 -183758357 + L1M4b LINE L1 -533 4294967217 -6359 677 162 65 65 chr5 19327283 19327437 -183758095 - MLT1A1 LTR MaLR 0 365 212 422 271 5 145 chr5 19327924 19328138 -183757394 + MER5A DNA MER1_type 3 186 -3 1181 232 42 10 chr5 19328880 19329263 -183756269 + MER114 LTR ERV 7 401 -247 752 311 37 63 chr5 19329330 19329793 -183755739 + L1M4b LINE L1 175 625 -5688 242 253 67 13 chr5 19329787 19329862 -183755670 + L1M4b LINE L1 995 1073 -5240 * 2969 219 34 7 chr5 19330071 19330904 -183754628 + L1M4b LINE L1 777 1783 -4530 312 252 84 15 chr5 19330973 19331104 -183754428 + L1M4b LINE L1 1881 2020 -4362 * 333 303 0 0 chr5 19331053 19331142 -183754390 - L1MC4 LINE L1 -1339 6703 6615 311 182 0 0 chr5 19331147 19331202 -183754330 - L1MC4 LINE L1 -1339 6703 6649 858 219 120 61 chr5 19331507 19331875 -183753657 + MLT1G1 LTR MaLR 1 357 -185 782 196 5 43 chr5 19332326 19332510 -183753022 - MER5B DNA MER1_type 0 178 2 2492 158 22 16 chr5 19332632 19333080 -183752452 + LTR32 LTR ERVL 21 471 0 493 301 108 29 chr5 19333144 19333523 -183752009 + MLT1I LTR MaLR 1 409 0 1882 226 73 28 chr5 19334623 19335155 -183750377 - MER74A LTR ERVL -2 556 1 1285 257 70 23 chr5 19335231 19335706 -183749826 - MLT1F1 LTR MaLR 0 567 71 262 213 241 19 chr5 19336007 19336055 -183749477 + MER94 DNA DNA 1 37 -97 2586 104 6 11 chr5 19336055 19336421 -183749111 + THE1B LTR MaLR 1 364 0 262 213 241 19 chr5 19336421 19336480 -183749052 + MER94 DNA DNA 37 132 -2 40405 34 22 2 chr5 19337105 19343159 -183742373 + L1PA3 LINE L1 13 6193 0 319 305 21 0 chr5 19343328 19343469 -183742063 - L1ME4a LINE L1 -229 5892 5749 181 363 62 0 chr5 19343525 19343605 -183741927 - MIR SINE MIR -40 222 138 2037 114 0 11 chr5 19344069 19344350 -183741182 + AluSx SINE Alu 22 299 -13 271 296 52 37 chr5 19344997 19345132 -183740400 + MER117 DNA MER1_type 3 139 -58 1795 251 48 39 chr5 19345756 19346576 -183738956 - Charlie2 DNA MER1_type -11 2851 2025 2527 66 3 0 chr5 19346742 19347045 -183738487 + AluSp SINE Alu 2 305 -8 25 0 0 0 chr5 19347400 19347425 -183738107 + AT_rich Low_complexity Low_complexity 1 25 0 2105 152 8 14 chr5 19347508 19347871 -183737661 + MLT1A1 LTR MaLR 5 365 0 317 159 0 14 chr5 19348433 19348502 -183737030 + (TG)n Simple_repeat Simple_repeat 2 69 0 656 328 50 55 chr5 19348744 19349329 -183736203 + ERVL LTR ERVL 3617 4405 -798 334 354 137 15 chr5 19349341 19349604 -183735928 - L2 LINE L2 -566 2748 2454 5920 212 10 6 chr5 19350717 19351060 -183734472 - L1PA16 LINE L1 -1 6165 5825 189 74 0 0 chr5 19351060 19351087 -183734445 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2002 109 22 0 chr5 19351087 19351363 -183734169 - AluSc SINE Alu -27 282 1 5920 212 10 6 chr5 19351363 19353145 -183732387 - L1PA16 LINE L1 -340 5826 4043 243 376 40 10 chr5 19353193 19353294 -183732238 - L2 LINE L2 -2 3311 3208 620 150 9 0 chr5 19354529 19354642 -183730890 + GA-rich Low_complexity Low_complexity 1 114 0 435 252 118 0 chr5 19354752 19354871 -183730661 + MLT1J2 LTR MaLR 72 204 -246 267 308 98 7 chr5 19356706 19356849 -183728683 - MIR SINE MIR -44 218 63 1151 349 69 40 chr5 19358006 19359010 -183726522 + ERVL LTR ERVL 791 1823 -3941 6159 97 21 1 chr5 19359022 19359981 -183725551 - L1PB1 LINE L1 -1 6150 5174 7756 201 22 45 chr5 19359981 19360022 -183725510 + L1 LINE L1 3234 3274 -2872 2599 42 3 0 chr5 19360022 19360329 -183725203 + AluY SINE Alu 1 308 -3 7756 201 22 45 chr5 19360329 19361527 -183724005 + L1 LINE L1 3274 4414 -1732 209 0 97 0 chr5 19361527 19361558 -183723974 + A-rich Low_complexity Low_complexity 4 37 0 7756 201 22 45 chr5 19361558 19362290 -183723242 + L1 LINE L1 4414 5161 -985 1564 326 99 36 chr5 19362293 19364106 -183721426 + ERVL LTR ERVL 1775 3708 -1777 1300 313 18 20 chr5 19364393 19364837 -183720695 + ERVL LTR ERVL 4109 4551 -1213 877 310 56 9 chr5 19364941 19365260 -183720272 + ERVL LTR ERVL 4745 5078 -686 297 75 0 0 chr5 19365553 19365593 -183719939 + (TA)n Simple_repeat Simple_repeat 1 40 0 1627 177 62 6 chr5 19366505 19366827 -183718705 + MER2 DNA MER2_type 6 345 0 24 32 0 0 chr5 19367074 19367105 -183718427 + AT_rich Low_complexity Low_complexity 1 31 0 198 244 165 55 chr5 19367729 19367856 -183717676 + L2 LINE L2 3173 3313 0 240 278 113 17 chr5 19367923 19368038 -183717494 - MIR SINE MIR -67 141 16 2212 231 68 49 chr5 19368331 19369233 -183716299 - L1M4 LINE L1 -838 6119 5201 1685 233 36 10 chr5 19370442 19370828 -183714704 - L1M4 LINE L1 -6460 399 4 563 327 48 56 chr5 19370840 19371894 -183713638 - L1MEc LINE L1 -5312 1084 39 24 67 0 0 chr5 19371915 19371960 -183713572 + AT_rich Low_complexity Low_complexity 1 45 0 2045 144 3 0 chr5 19373055 19373354 -183712178 + AluSx SINE Alu 1 300 -12 299 122 0 0 chr5 19373553 19373616 -183711916 + Alu SINE Alu 239 301 0 345 24 0 0 chr5 19373907 19373949 -183711583 + (TG)n Simple_repeat Simple_repeat 1 42 0 367 311 49 18 chr5 19374080 19374244 -183711288 + MIR SINE MIR 5 173 -89 205 328 17 0 chr5 19374775 19374833 -183710699 + L2 LINE L2 3012 3070 -243 23 86 0 0 chr5 19375335 19375393 -183710139 + AT_rich Low_complexity Low_complexity 1 58 0 239 313 0 36 chr5 19375587 19375699 -183709833 + MLT1H LTR MaLR 66 173 -376 4266 170 11 12 chr5 19375814 19376548 -183708984 - MER44D DNA MER2_type 0 605 1 22 56 0 0 chr5 19376675 19376711 -183708821 + AT_rich Low_complexity Low_complexity 1 36 0 442 326 75 27 chr5 19376840 19377134 -183708398 + L1ME4a LINE L1 5576 5883 -238 3034 124 17 2 chr5 19377267 19377839 -183707693 - L1PA16 LINE L1 0 6166 5486 3190 203 18 18 chr5 19377846 19378631 -183706901 + L1 LINE L1 3103 3887 -2259 366 316 83 23 chr5 19378975 19379108 -183706424 - MLT1K LTR MaLR -408 180 40 1946 157 0 20 chr5 19380170 19380476 -183705056 - AluSx SINE Alu -12 300 1 188 344 58 63 chr5 19380646 19380835 -183704697 + MIR3 SINE MIR 16 203 -5 565 218 18 0 chr5 19380934 19381044 -183704488 + HERVL40 LTR ERVL 2794 2905 -2625 739 301 53 61 chr5 19381216 19381592 -183703940 - L2 LINE L2 -682 2632 2260 242 246 14 0 chr5 19381601 19381670 -183703862 - L2 LINE L2 -1320 1994 1925 391 377 52 0 chr5 19381676 19381867 -183703665 - L2 LINE L2 -2070 1244 1044 1697 297 25 6 chr5 19381879 19382398 -183703134 + HERVL40 LTR ERVL 2641 3169 -2595 397 171 40 0 chr5 19382423 19382499 -183703033 - LTR40a LTR ERVL -416 103 25 1315 263 64 12 chr5 19382511 19382838 -183702694 + LTR40a LTR ERVL 169 512 -7 364 250 28 19 chr5 19382851 19382959 -183702573 + HERVL40 LTR ERVL 8 116 -5414 370 254 87 22 chr5 19383261 19383399 -183702133 + HERVL40 LTR ERVL 1077 1223 -4307 342 208 0 26 chr5 19383489 19383566 -183701966 + HERVL40 LTR ERVL 1455 1529 -4001 3002 253 78 16 chr5 19383630 19384436 -183701096 + HERVL40 LTR ERVL 2050 2905 -2625 256 150 0 0 chr5 19384439 19384479 -183701053 + LTR40b LTR ERVL 423 462 0 619 241 19 6 chr5 19384490 19384648 -183700884 - LTR40a LTR ERVL -359 160 1 2847 244 62 25 chr5 19384687 19385037 -183700495 + HERVL40 LTR ERVL 3765 4101 -1663 1854 180 30 45 chr5 19385037 19385437 -183700095 - MSTD LTR MaLR 0 396 3 2847 244 62 25 chr5 19385437 19385873 -183699659 + HERVL40 LTR ERVL 4101 4580 -1184 438 231 28 7 chr5 19385879 19386022 -183699510 - L1M LINE L1 -761 5401 5256 1817 130 75 132 chr5 19386142 19386596 -183698936 - MSTA LTR MaLR 0 428 1 953 293 94 19 chr5 19387100 19387481 -183698051 + MLT1H LTR MaLR 15 487 -62 2268 71 34 0 chr5 19387481 19387777 -183697755 - AluY SINE Alu -5 306 1 953 293 94 19 chr5 19387777 19387841 -183697691 + MLT1H LTR MaLR 487 545 -4 1195 68 0 0 chr5 19388265 19388413 -183697119 + AluY SINE Alu 155 302 -9 2044 109 40 7 chr5 19388430 19388732 -183696800 - AluSx SINE Alu 0 312 1 375 264 210 12 chr5 19388876 19389043 -183696489 + MIR SINE MIR 53 252 -10 203 286 29 14 chr5 19389400 19389470 -183696062 - MIR SINE MIR -110 152 82 248 234 143 26 chr5 19390379 19390456 -183695076 - MIR SINE MIR -85 123 38 3848 143 27 15 chr5 19390597 19391141 -183694391 + L1PA16 LINE L1 5485 6040 -126 2436 50 3 3 chr5 19391141 19391443 -183694089 + AluY SINE Alu 1 302 -9 3848 143 27 15 chr5 19391443 19391562 -183693970 + L1PA16 LINE L1 6040 6156 -10 354 154 0 0 chr5 19391785 19391837 -183693695 + tRNA-Arg-CGC tRNA tRNA 2 53 -23 24 0 0 0 chr5 19392386 19392410 -183693122 + AT_rich Low_complexity Low_complexity 1 24 0 892 207 87 115 chr5 19392592 19392993 -183692539 + MLT1C LTR MaLR 35 424 -43 27 49 0 0 chr5 19394277 19394318 -183691214 + AT_rich Low_complexity Low_complexity 1 41 0 1145 204 47 52 chr5 19395566 19395948 -183689584 + LTR37A LTR ERV1 1 380 -46 738 308 25 8 chr5 19395986 19396226 -183689306 - MIR SINE MIR -1 261 18 1276 207 118 5 chr5 19397112 19397494 -183688038 - L1M4 LINE L1 -876 5270 4846 1110 253 38 40 chr5 19397703 19398074 -183687458 - MLT1A2 LTR MaLR -4 370 1 371 287 55 44 chr5 19398178 19398359 -183687173 - MIR3 SINE MIR -6 202 20 1728 138 70 48 chr5 19400495 19400851 -183684681 - THE1B LTR MaLR 0 364 1 34839 91 11 12 chr5 19401101 19407258 -183678274 + L1PA6 LINE L1 11 6153 -1 191 370 9 44 chr5 19407757 19407984 -183677548 - L2 LINE L2 -2652 662 444 182 234 156 62 chr5 19411405 19411469 -183674063 + MER5B DNA MER1_type 35 104 -74 1899 119 36 103 chr5 19412614 19413002 -183672530 + THE1B LTR MaLR 1 362 -2 878 167 111 12 chr5 19413067 19413423 -183672109 + MLT1D LTR MaLR 85 505 0 3062 161 19 9 chr5 19414660 19415239 -183670293 + L1MA9 LINE L1 5728 6312 0 195 42 0 0 chr5 19416614 19416638 -183668894 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 313 0 15 chr5 19416891 19416958 -183668574 - L2 LINE L2 -9 3263 3198 2027 135 10 3 chr5 19417018 19417306 -183668226 + AluSx SINE Alu 1 290 -22 1126 248 148 19 chr5 19417348 19417858 -183667674 + MER52A LTR ERV1 1 656 -1099 594 222 37 7 chr5 19417855 19417990 -183667542 + MER52A LTR ERV1 1616 1754 -1 * 917 214 99 60 chr5 19418405 19418807 -183666725 - MLT1C LTR MaLR -4 463 46 323 302 19 19 chr5 19420598 19420704 -183664828 + MIR3 SINE MIR 98 203 -5 1509 159 23 13 chr5 19422604 19422905 -183662627 - L1MA7 LINE L1 0 6291 5988 1874 181 38 30 chr5 19422917 19423457 -183662075 - MLT2A2 LTR ERVL -8 546 1 1859 185 30 5 chr5 19423460 19423833 -183661699 - L1MA7 LINE L1 -304 5987 5606 * 1879 178 30 25 chr5 19423831 19424263 -183661269 + L1 LINE L1 4869 5302 -844 319 24 0 0 chr5 19424268 19424309 -183661223 - L1PB1 LINE L1 -254 5897 5857 1707 73 30 0 chr5 19424309 19424532 -183661000 + L1PB1 LINE L1 5911 6151 0 376 111 69 0 chr5 19424538 19424610 -183660922 + L1ME LINE L1 5177 5253 -893 257 358 19 6 chr5 19425159 19425321 -183660211 + L1ME LINE L1 5362 5525 -641 1698 199 5 39 chr5 19425368 19425395 -183660137 - MLT2D LTR ERVL -16 398 372 504 0 0 0 chr5 19425395 19425451 -183660081 + (TG)n Simple_repeat Simple_repeat 2 57 0 1698 199 5 39 chr5 19425451 19425835 -183659697 - MLT2D LTR ERVL -42 372 1 289 278 0 21 chr5 19425837 19425934 -183659598 + L1ME LINE L1 5613 5707 -463 374 299 149 5 chr5 19426335 19426536 -183658996 + L2 LINE L2 2468 2697 -617 884 180 115 0 chr5 19426544 19426727 -183658805 - MER3 DNA MER1_type 0 209 6 799 296 40 61 chr5 19426734 19427069 -183658463 + L2 LINE L2 2712 3027 -286 1865 146 86 29 chr5 19427069 19427488 -183658044 + MER65A LTR ERV1 3 445 0 799 296 40 61 chr5 19427488 19427760 -183657772 + L2 LINE L2 3027 3303 -10 405 303 43 32 chr5 19429104 19429292 -183656240 - MIR3 SINE MIR -17 191 2 685 293 67 9 chr5 19430628 19430853 -183654679 + MIR SINE MIR 25 262 0 1169 231 111 0 chr5 19433720 19434027 -183651505 - MER58B DNA MER1_type 0 341 1 2254 118 0 0 chr5 19436825 19437130 -183648402 + AluSx SINE Alu 1 305 -7 21 36 0 0 chr5 19437221 19437249 -183648283 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 19437653 19437683 -183647849 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 19437868 19437897 -183647635 + AT_rich Low_complexity Low_complexity 1 29 0 2451 57 40 0 chr5 19438136 19438434 -183647098 + AluY SINE Alu 2 311 0 229 305 8 31 chr5 19438472 19438600 -183646932 + L1ME LINE L1 5663 5787 -334 237 143 71 0 chr5 19439937 19439979 -183645553 + MER3 DNA MER1_type 46 90 -119 * 719 216 122 0 chr5 19439942 19440123 -183645409 - MER3 DNA MER1_type -6 203 1 275 394 117 0 chr5 19440738 19440875 -183644657 + L2 LINE L2 3111 3263 -9 204 216 0 0 chr5 19442045 19442082 -183643450 + GA-rich Low_complexity Low_complexity 4 40 0 274 227 231 28 chr5 19442313 19442418 -183643114 - MIR SINE MIR -67 141 31 572 179 86 0 chr5 19442442 19442559 -183642973 - MER5A DNA MER1_type -2 187 61 180 163 0 0 chr5 19444638 19444681 -183640851 + CT-rich Low_complexity Low_complexity 1 43 0 1741 75 40 0 chr5 19444978 19445228 -183640304 + L1PA8 LINE L1 5921 6172 0 312 120 0 0 chr5 19446963 19447013 -183638519 + (TG)n Simple_repeat Simple_repeat 2 51 0 27 49 0 0 chr5 19447254 19447295 -183638237 + AT_rich Low_complexity Low_complexity 1 41 0 1099 217 4 17 chr5 19447322 19447552 -183637980 - MIR SINE MIR -35 227 1 2742 267 75 29 chr5 19449919 19450903 -183634629 + L1M4 LINE L1 3292 4339 -1807 2227 115 0 3 chr5 19450903 19451207 -183634325 + AluSx SINE Alu 1 303 -9 2742 267 75 29 chr5 19451207 19451377 -183634155 + L1M4 LINE L1 4339 4500 -1646 1178 57 0 0 chr5 19453663 19453803 -183631729 + AluY SINE Alu 152 291 -20 1798 208 129 15 chr5 19454717 19455188 -183630344 + LTR1B LTR ERV1 1 525 -301 518 279 29 0 chr5 19455236 19455376 -183630156 + LTR1B LTR ERV1 675 818 -8 573 257 92 39 chr5 19455974 19456460 -183629072 + MLT1G1 LTR MaLR 1 515 -40 276 227 15 0 chr5 19456567 19456633 -183628899 + MIR3 SINE MIR 126 192 -16 729 129 22 29 chr5 19456773 19456912 -183628620 + L1MB8 LINE L1 6035 6172 -6 208 139 0 0 chr5 19457119 19457155 -183628377 + (T)n Simple_repeat Simple_repeat 1 36 0 426 251 184 39 chr5 19457176 19457333 -183628199 + MIR SINE MIR 15 210 -52 261 0 0 0 chr5 19457333 19457362 -183628170 + (CA)n Simple_repeat Simple_repeat 2 30 0 426 251 184 39 chr5 19457362 19457411 -183628121 + MIR SINE MIR 210 251 -11 205 349 63 0 chr5 19458808 19458871 -183626661 + L2 LINE L2 3121 3187 -85 1202 205 23 5 chr5 19459027 19459055 -183626477 + MER20 DNA MER1_type 1 27 -192 180 0 0 0 chr5 19459055 19459075 -183626457 + (CCCTA)n Simple_repeat Simple_repeat 1 20 0 1202 205 23 5 chr5 19459075 19459261 -183626271 + MER20 DNA MER1_type 27 219 0 4975 126 34 68 chr5 19459962 19460817 -183624715 + LTR1B LTR ERV1 1 826 0 361 234 114 0 chr5 19461352 19461488 -183624044 + MIR SINE MIR 27 175 -62 342 0 0 0 chr5 19461520 19461558 -183623974 + (CA)n Simple_repeat Simple_repeat 2 39 0 3337 212 87 16 chr5 19461559 19462329 -183623203 + MER21B LTR ERV1 22 846 -17 30 45 0 0 chr5 19462627 19462671 -183622861 + AT_rich Low_complexity Low_complexity 1 44 0 343 193 121 0 chr5 19462984 19463067 -183622465 - MIR3 SINE MIR -39 169 77 2072 122 96 35 chr5 19463222 19463565 -183621967 + THE1B LTR MaLR 1 364 0 10467 91 7 94 chr5 19463565 19465295 -183620237 + THE1B-int LTR MaLR 1 1580 0 1532 169 156 29 chr5 19465295 19465609 -183619923 + THE1A LTR MaLR 1 354 -1 3078 112 73 36 chr5 19466221 19466782 -183618750 - L1MA4 LINE L1 -6 6294 5713 950 147 0 0 chr5 19467228 19467357 -183618175 - FLAM_C SINE Alu -4 129 1 2375 88 3 0 chr5 19468198 19468492 -183617040 - AluSq SINE Alu -16 297 3 785 188 0 0 chr5 19470176 19470309 -183615223 + FLAM_A SINE Alu 1 133 0 269 329 172 20 chr5 19470556 19470957 -183614575 - L2 LINE L2 -203 3069 2619 380 348 43 19 chr5 19470970 19471180 -183614352 - L2 LINE L2 -830 2484 2270 1762 112 14 22 chr5 19471454 19471732 -183613800 + AluSx SINE Alu 37 312 0 366 286 64 36 chr5 19472493 19472633 -183612899 - L2 LINE L2 -2 3311 3168 520 268 102 61 chr5 19472663 19472958 -183612574 + L2 LINE L2 2552 2858 -456 1271 205 266 7 chr5 19472958 19473360 -183612172 + MLT1H LTR MaLR 1 549 0 850 326 84 26 chr5 19473362 19473791 -183611741 + L2 LINE L2 2855 3308 -5 1898 168 32 69 chr5 19473955 19474360 -183611172 + MLT1B LTR MaLR 1 390 0 1117 276 59 10 chr5 19475642 19476048 -183609484 - Charlie7 DNA MER1_type -1926 686 261 379 0 0 38 chr5 19476442 19476495 -183609037 + (TG)n Simple_repeat Simple_repeat 2 52 0 341 362 7 7 chr5 19478692 19478833 -183606699 + LTR33 LTR ERVL 111 251 -270 201 133 0 0 chr5 19479604 19479634 -183605898 + (TG)n Simple_repeat Simple_repeat 1 30 0 294 29 0 0 chr5 19481106 19481141 -183604391 + (CA)n Simple_repeat Simple_repeat 2 36 0 502 307 68 6 chr5 19482412 19482588 -183602944 + MIR3 SINE MIR 7 193 -15 1364 230 168 59 chr5 19484049 19484544 -183600988 + MLT1H LTR MaLR 1 549 0 234 91 0 0 chr5 19484587 19484620 -183600912 + (CA)n Simple_repeat Simple_repeat 2 34 0 1356 139 86 0 chr5 19484658 19484867 -183600665 + MER30 DNA MER1_type 4 230 0 400 274 55 33 chr5 19484885 19485153 -183600379 + L1ME4a LINE L1 5290 5569 -775 806 210 160 70 chr5 19485177 19485504 -183600028 + MSTD LTR MaLR 1 386 -10 454 249 142 31 chr5 19485670 19485931 -183599601 + L1ME4a LINE L1 5748 6037 -84 198 0 0 0 chr5 19485931 19485953 -183599579 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 318 87 0 0 chr5 19485952 19485998 -183599534 + (CA)n Simple_repeat Simple_repeat 1 46 0 25 51 0 0 chr5 19486520 19486559 -183598973 + AT_rich Low_complexity Low_complexity 1 39 0 2189 145 14 19 chr5 19486672 19487038 -183598494 + THE1B LTR MaLR 1 364 0 10996 120 25 26 chr5 19487041 19488619 -183596913 + THE1B-int LTR MaLR 5 1580 0 2691 120 3 8 chr5 19488619 19488985 -183596547 + THE1B LTR MaLR 1 364 0 308 345 49 30 chr5 19488985 19489252 -183596280 + L1 LINE L1 2222 2493 -3653 445 289 88 63 chr5 19489427 19489825 -183595707 + L1 LINE L1 2740 3147 -2999 228 273 82 59 chr5 19490019 19490239 -183595293 + L1 LINE L1 3543 3767 -2379 215 163 82 0 chr5 19490422 19490471 -183595061 - MIR SINE MIR -1 261 209 318 232 121 10 chr5 19490755 19490854 -183594678 - L2 LINE L2 -14 3299 3190 216 0 0 0 chr5 19491262 19491286 -183594246 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2139 76 0 129 chr5 19492186 19492542 -183592990 - AluSp SINE Alu -3 310 1 328 312 71 24 chr5 19493547 19493717 -183591815 + MIR SINE MIR 85 262 0 505 246 8 25 chr5 19494588 19494710 -183590822 + L1MC3 LINE L1 7131 7250 -535 1180 176 106 100 chr5 19494711 19495070 -183590462 + MLT1A1 LTR MaLR 1 361 -4 189 222 22 0 chr5 19496075 19496120 -183589412 + L3 LINE CR1 1516 1561 -16 212 143 0 0 chr5 19496448 19496483 -183589049 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 627 269 55 38 chr5 19496768 19497006 -183588526 - MIR SINE MIR -6 256 15 232 232 0 0 chr5 19498282 19498338 -183587194 + (CAGAGA)n Simple_repeat Simple_repeat 2 57 0 571 241 11 0 chr5 19498866 19499027 -183586505 + L1ME3 LINE L1 5460 5625 -537 447 290 0 26 chr5 19499044 19499199 -183586333 + MLT1H LTR MaLR 22 172 -377 1257 264 49 3 chr5 19499321 19499688 -183585844 + L1ME3 LINE L1 5778 6161 -1 438 282 26 48 chr5 19500702 19500929 -183584603 - L1ME LINE L1 -298 5823 5602 515 85 12 0 chr5 19501121 19501203 -183584329 + (TG)n Simple_repeat Simple_repeat 2 84 0 966 240 68 84 chr5 19501673 19502186 -183583346 + MLT1J LTR MaLR 5 509 -2 310 280 84 38 chr5 19502261 19502500 -183583032 + L1MC/D LINE L1 2583 2832 -3314 398 277 73 55 chr5 19502683 19502957 -183582575 + L1MC/D LINE L1 5317 5595 -2213 28 0 0 0 chr5 19503439 19503467 -183582065 + AT_rich Low_complexity Low_complexity 1 28 0 197 273 55 0 chr5 19503761 19503816 -183581716 + MIR SINE MIR 205 262 0 1827 162 55 0 chr5 19504666 19504994 -183580538 - MER7A DNA MER2_type -2 344 1 4954 176 80 3 chr5 19505087 19506719 -183578813 + L1MA4 LINE L1 4349 6120 -180 1546 72 36 18 chr5 19506721 19506943 -183578589 - L1PA10 LINE L1 -1 6167 5942 984 164 11 5 chr5 19506943 19507131 -183578401 + L1MA8 LINE L1 6096 6285 -6 268 207 0 0 chr5 19507146 19507204 -183578328 - Charlie1 DNA MER1_type -524 2237 2180 21 57 0 0 chr5 19507204 19507239 -183578293 + AT_rich Low_complexity Low_complexity 1 35 0 208 143 67 38 chr5 19508235 19508340 -183577192 + (TTATA)n Simple_repeat Simple_repeat 1 108 0 * 267 187 58 23 chr5 19508285 19508456 -183577076 + (TA)n Simple_repeat Simple_repeat 2 178 0 23 33 0 0 chr5 19508456 19508486 -183577046 + AT_rich Low_complexity Low_complexity 1 30 0 1238 56 0 12 chr5 19509069 19509231 -183576301 - L1PA5 LINE L1 -6 6148 5989 21 0 0 0 chr5 19510156 19510177 -183575355 + AT_rich Low_complexity Low_complexity 1 21 0 434 284 101 51 chr5 19510540 19510797 -183574735 + L2 LINE L2 3044 3313 0 268 308 117 25 chr5 19510951 19511071 -183574461 - MIR SINE MIR -130 132 2 582 220 24 6 chr5 19511576 19511744 -183573788 + L1M4 LINE L1 2213 2383 -3763 700 204 20 70 chr5 19511744 19511945 -183573587 + MLT1A1 LTR MaLR 1 191 -174 537 313 156 8 chr5 19512194 19512670 -183572862 + L2 LINE L2 2508 3065 -248 2350 181 145 124 chr5 19512713 19513295 -183572237 - L1MC3 LINE L1 -17 7768 7200 246 219 151 0 chr5 19513295 19513368 -183572164 - MLT1F1 LTR MaLR -448 119 36 2350 181 145 124 chr5 19513368 19513382 -183572150 - L1MC3 LINE L1 -585 7200 7188 284 56 0 0 chr5 19513382 19513418 -183572114 - tRNA-Gly-GGG tRNA tRNA -38 36 1 2350 181 145 124 chr5 19513418 19513875 -183571657 - L1MC3 LINE L1 -597 7188 6583 208 283 12 24 chr5 19514127 19514293 -183571239 + (TA)n Simple_repeat Simple_repeat 1 164 0 270 294 0 0 chr5 19514302 19514387 -183571145 - L1MC3 LINE L1 -1214 6571 6487 291 146 0 0 chr5 19514390 19514438 -183571094 - MLT2D LTR ERVL 0 414 367 236 244 0 0 chr5 19514438 19514483 -183571049 + (TG)n Simple_repeat Simple_repeat 1 45 0 503 177 0 0 chr5 19514575 19514654 -183570878 - Tigger5 DNA MER2_type -2244 79 1 198 0 0 0 chr5 19514663 19514685 -183570847 + (TG)n Simple_repeat Simple_repeat 2 23 0 1122 232 37 92 chr5 19514685 19515173 -183570359 - MLT2B1 LTR ERVL -59 461 1 348 285 66 40 chr5 19515228 19515379 -183570153 + L2 LINE L2 3158 3312 -1 198 0 0 0 chr5 19518596 19518618 -183566914 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1327 13 0 0 chr5 19518618 19518769 -183566763 - L1PA2 LINE L1 -13 6142 5992 1010 227 106 11 chr5 19518948 19519230 -183566302 + MER58B DNA MER1_type 32 340 -1 594 331 6 0 chr5 19521277 19521449 -183564083 - MIR SINE MIR -6 256 84 790 275 140 25 chr5 19522358 19522802 -183562730 + MLT1G1 LTR MaLR 90 584 -11 861 254 37 18 chr5 19522939 19523156 -183562376 + MIR SINE MIR 8 228 -34 305 271 170 90 chr5 19526460 19526964 -183558568 + L1M2 LINE L1 525 1022 -5827 210 37 0 0 chr5 19526967 19526994 -183558538 + (CGG)n Simple_repeat Simple_repeat 1 27 0 329 313 104 65 chr5 19527184 19527774 -183557758 - L1M2 LINE L1 -5595 1254 790 221 313 30 0 chr5 19528425 19528492 -183557040 - MIR SINE MIR -120 142 74 921 289 81 41 chr5 19529716 19530205 -183555327 + L2 LINE L2 2421 2927 -345 2209 97 0 35 chr5 19530269 19530579 -183554953 + AluSq SINE Alu 1 299 -14 217 380 36 36 chr5 19531522 19531659 -183553873 + L2 LINE L2 3136 3272 0 228 290 32 0 chr5 19532769 19532831 -183552701 - L2 LINE L2 -224 3048 2985 1195 171 0 5 chr5 19532895 19533094 -183552438 + AluJb SINE Alu 107 304 -8 297 319 7 44 chr5 19533870 19534005 -183551527 + L2 LINE L2 3183 3312 -1 619 273 66 0 chr5 19534096 19534338 -183551194 - MIR SINE MIR 0 262 5 628 109 10 0 chr5 19534455 19534556 -183550976 + L1MB4 LINE L1 6077 6178 -2 226 211 28 70 chr5 19534981 19535052 -183550480 + L2 LINE L2 3201 3268 -4 2194 95 3 10 chr5 19535482 19535778 -183549754 + AluSx SINE Alu 5 298 -14 3271 28 0 3 chr5 19536536 19536924 -183548608 + L1PA5 LINE L1 5756 6142 -12 290 291 39 0 chr5 19536939 19537071 -183548461 - MER39 LTR ERV1 -320 387 115 233 174 0 0 chr5 19537098 19537144 -183548388 - MER39 LTR ERV1 -661 46 1 477 165 72 0 chr5 19537312 19537409 -183548123 + MER58C DNA MER1_type 112 215 0 708 139 23 8 chr5 19538018 19538147 -183547385 + MER20 DNA MER1_type 30 160 -59 202 293 82 48 chr5 19538773 19538981 -183546551 - L2 LINE L2 -1284 2030 1816 2250 109 0 0 chr5 19539024 19539317 -183546215 + AluSx SINE Alu 1 293 -19 2061 197 24 74 chr5 19539397 19539691 -183545841 - MER21B LTR ERV1 -3 860 553 1735 145 19 0 chr5 19539691 19539953 -183545579 + AluJb SINE Alu 2 268 -44 2061 197 24 74 chr5 19539953 19539968 -183545564 - MER21B LTR ERV1 -310 553 539 207 0 0 0 chr5 19539968 19539991 -183545541 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2061 197 24 74 chr5 19539991 19540234 -183545298 - MER21B LTR ERV1 -324 539 335 6162 91 2 0 chr5 19540234 19541076 -183544456 + THE1B-int LTR MaLR 737 1580 0 2103 141 30 25 chr5 19541076 19541438 -183544094 + THE1B LTR MaLR 1 364 0 269 337 0 12 chr5 19541929 19542015 -183543517 + L2 LINE L2 3186 3270 -2 1450 218 22 14 chr5 19542157 19542515 -183543017 - MLT1H1 LTR MaLR 0 555 195 569 255 6 19 chr5 19542515 19542676 -183542856 + MER20 DNA MER1_type 3 161 -58 248 253 149 0 chr5 19542719 19542806 -183542726 - MLT1H1 LTR MaLR -351 204 105 234 293 20 20 chr5 19542819 19542918 -183542614 - MLT1H LTR MaLR -389 160 62 392 276 32 19 chr5 19543596 19543752 -183541780 + Charlie8 DNA MER1_type 62 219 -2198 249 119 0 0 chr5 19543857 19543899 -183541633 + (TAA)n Simple_repeat Simple_repeat 2 43 0 323 297 77 46 chr5 19544140 19544335 -183541197 + MLT1H LTR MaLR 119 319 -230 314 236 9 27 chr5 19544480 19544590 -183540942 - L1MC5 LINE L1 -48 7913 7806 1778 169 7 0 chr5 19545105 19545395 -183540137 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 19545467 19545872 -183539660 - L1MC/D LINE L1 -2000 5808 5379 294 183 37 0 chr5 19545872 19545954 -183539578 + (TA)n Simple_repeat Simple_repeat 2 86 0 198 71 0 0 chr5 19545955 19545983 -183539549 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 19545987 19546149 -183539383 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 19546253 19546737 -183538795 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 19547650 19547796 -183537736 - LTR67 LTR ERVL -5 552 410 1325 262 91 29 chr5 19548088 19548572 -183536960 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 19548653 19548686 -183536846 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 19549322 19549395 -183536137 - L1M4 LINE L1 -3172 2974 2898 448 276 97 21 chr5 19549628 19549773 -183535759 - MIR SINE MIR -70 192 37 2199 107 48 46 chr5 19550480 19550853 -183534679 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 19550945 19550994 -183534538 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 19551083 19551138 -183534394 + AT_rich Low_complexity Low_complexity 1 55 0 22616 160 8 10 chr5 19551726 19556653 -183528879 - L1PA11 LINE L1 -2 7610 2695 1940 122 131 24 chr5 19556657 19556986 -183528546 + THE1B LTR MaLR 1 364 0 12070 89 4 0 chr5 19556986 19558542 -183526990 + THE1B-int LTR MaLR 1 1562 -18 4782 210 15 41 chr5 19558549 19559579 -183525953 - L1PA11 LINE L1 -6576 1005 3 497 217 42 28 chr5 19559614 19559757 -183525775 - L1MA9 LINE L1 -25 6287 6143 1015 148 0 13 chr5 19559763 19559918 -183525614 + AluJb SINE Alu 142 294 -18 1411 172 96 98 chr5 19560221 19560587 -183524945 + MLT1A1 LTR MaLR 1 365 0 1691 190 133 12 chr5 19560593 19560993 -183524539 + MER39 LTR ERV1 260 707 0 298 295 78 62 chr5 19561003 19561247 -183524285 + L1MC/D LINE L1 5394 5641 -2167 810 236 39 0 chr5 19561379 19561561 -183523971 + AluJo SINE Alu 120 308 -4 1149 125 20 50 chr5 19562374 19562574 -183522958 - MER31A LTR ERV1 -291 194 1 202 349 75 0 chr5 19563126 19563232 -183522300 - L2 LINE L2 -827 2487 2374 2852 220 9 5 chr5 19563830 19564472 -183521060 - L1 LINE L1 -2890 3256 2612 233 226 38 9 chr5 19564709 19564815 -183520717 + (TA)n Simple_repeat Simple_repeat 1 109 0 1085 190 7 108 chr5 19565700 19565798 -183519734 - MLT1A2 LTR MaLR -109 265 159 333 0 0 0 chr5 19565798 19565835 -183519697 + (CA)n Simple_repeat Simple_repeat 2 38 0 1085 190 7 108 chr5 19565835 19566031 -183519501 - MLT1A2 LTR MaLR -215 159 1 218 300 121 0 chr5 19566129 19566234 -183519298 + MIR SINE MIR 45 160 -69 1199 80 0 0 chr5 19566246 19566396 -183519136 + AluY SINE Alu 160 309 -2 287 287 21 21 chr5 19566407 19566501 -183519031 + MIR SINE MIR 153 246 -16 260 333 17 34 chr5 19569238 19569415 -183516117 - L1ME LINE L1 -349 5772 5599 653 305 5 15 chr5 19569803 19570006 -183515526 + MIR SINE MIR 11 211 -51 242 290 16 0 chr5 19570056 19570118 -183515414 - L2 LINE L2 -12 3301 3239 242 270 16 16 chr5 19570183 19570246 -183515286 + L2 LINE L2 3210 3272 0 180 0 0 0 chr5 19572811 19572831 -183512701 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 222 37 0 0 chr5 19572830 19572857 -183512675 + (CA)n Simple_repeat Simple_repeat 1 27 0 1840 138 76 3 chr5 19572945 19573236 -183512296 + AluSx SINE Alu 1 312 0 2156 123 0 3 chr5 19574167 19574469 -183511063 - AluSx SINE Alu -7 305 5 204 118 29 0 chr5 19574716 19574750 -183510782 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1836 130 7 43 chr5 19574751 19575051 -183510481 - AluSx SINE Alu -23 289 1 204 172 31 31 chr5 19575225 19575289 -183510243 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 2300 105 0 7 chr5 19575624 19575929 -183509603 + AluSg SINE Alu 1 303 -7 1827 121 37 7 chr5 19576043 19576315 -183509217 - AluSq SINE Alu -6 307 28 184 292 104 97 chr5 19577179 19577467 -183508065 - L2 LINE L2 -56 3216 2927 2437 99 79 15 chr5 19577494 19577836 -183507696 + THE1B LTR MaLR 1 364 0 253 333 0 0 chr5 19577992 19578070 -183507462 - L2 LINE L2 -990 2324 2247 513 256 78 57 chr5 19578133 19578363 -183507169 - L2 LINE L2 -1240 2074 1840 245 313 88 31 chr5 19578529 19578721 -183506811 - L2 LINE L2 -1723 1591 1389 693 309 82 10 chr5 19578723 19579014 -183506518 + L2 LINE L2 2326 2637 -677 1484 231 99 12 chr5 19579022 19579447 -183506085 + MLT1C LTR MaLR 6 467 0 768 266 171 37 chr5 19579450 19580038 -183505494 + L2 LINE L2 2650 3313 0 193 296 0 0 chr5 19580395 19580439 -183505093 + MIR3 SINE MIR 148 191 -17 252 213 0 0 chr5 19580463 19580524 -183505008 + CT-rich Low_complexity Low_complexity 1 61 0 2260 205 50 8 chr5 19581663 19582145 -183503387 - MLT1D LTR MaLR -1 504 3 489 161 0 0 chr5 19582770 19582857 -183502675 + (TA)n Simple_repeat Simple_repeat 1 87 0 2018 108 114 6 chr5 19582857 19583191 -183502341 + MSTA LTR MaLR 59 428 0 641 351 130 11 chr5 19583225 19583687 -183501845 + L2 LINE L2 2371 2887 -427 1438 218 55 72 chr5 19584423 19584803 -183500729 - L1ME2 LINE L1 -3 6159 5787 2497 58 0 0 chr5 19584803 19585098 -183500434 + AluY SINE Alu 1 295 -16 1438 218 55 72 chr5 19585098 19585204 -183500328 - L1ME2 LINE L1 -375 5787 5681 455 215 51 0 chr5 19585366 19585524 -183500008 - L1ME2 LINE L1 -1679 4467 4302 1177 243 31 50 chr5 19585631 19585682 -183499850 - L1ME2 LINE L1 -3015 3131 3081 2368 97 0 3 chr5 19585682 19585992 -183499540 - AluSq SINE Alu -4 309 1 1177 243 31 50 chr5 19585992 19586040 -183499492 - L1ME2 LINE L1 -3065 3081 3034 2090 114 7 16 chr5 19586040 19586347 -183499185 - AluJb SINE Alu -8 304 1 1177 243 31 50 chr5 19586347 19586670 -183498862 - L1ME2 LINE L1 -3112 3034 2716 985 246 191 18 chr5 19586672 19587099 -183498433 - MLT1H LTR MaLR -1 548 9 495 263 84 19 chr5 19587246 19587459 -183498073 - L1ME2 LINE L1 -3607 2539 2313 426 157 48 0 chr5 19587497 19587580 -183497952 - MER93b LTR ERV1 -111 262 176 939 198 6 0 chr5 19587602 19587759 -183497773 + MER93b LTR ERV1 1 158 -215 529 170 50 10 chr5 19587764 19587864 -183497668 + MER93b LTR ERV1 270 373 0 2090 137 0 3 chr5 19587945 19588252 -183497280 - AluSx SINE Alu -6 306 1 475 220 0 0 chr5 19588322 19588413 -183497119 - MLT1D LTR MaLR -414 91 1 1359 109 139 0 chr5 19588720 19588922 -183496610 + MER30 DNA MER1_type 1 230 0 1023 278 57 44 chr5 19590271 19590608 -183494924 + MER115 DNA AcHobo 1 332 -361 2688 108 17 8 chr5 19590608 19590969 -183494563 - THE1B LTR MaLR 0 364 1 1023 278 57 44 chr5 19590969 19591262 -183494270 + MER115 DNA AcHobo 332 693 0 260 270 16 0 chr5 19591371 19591434 -183494098 + MIR SINE MIR 40 103 -159 1920 274 82 9 chr5 19591522 19592069 -183493463 - MLT1G1 LTR MaLR -2 593 7 299 271 99 26 chr5 19592717 19592868 -183492664 + MIR SINE MIR 101 262 0 2083 129 7 7 chr5 19596345 19596640 -183488892 + AluSx SINE Alu 3 297 -15 292 276 67 19 chr5 19596646 19596751 -183488781 - L2 LINE L2 0 3313 3204 683 309 39 4 chr5 19597052 19597282 -183488250 + MIR SINE MIR 20 257 -5 2983 110 20 22 chr5 19597340 19597839 -183487693 + L1MA4 LINE L1 5411 5908 -395 348 24 0 0 chr5 19598267 19598308 -183487224 + (CA)n Simple_repeat Simple_repeat 1 41 0 2063 151 29 0 chr5 19598308 19598685 -183486847 + L1MA4 LINE L1 5913 6300 0 294 189 18 41 chr5 19599495 19599664 -183485868 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 457 319 83 6 chr5 19599824 19599993 -183485539 - MIR SINE MIR -15 247 66 24 53 0 0 chr5 19600043 19600081 -183485451 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 19600471 19600496 -183485036 + AT_rich Low_complexity Low_complexity 1 25 0 250 125 100 113 chr5 19600726 19600806 -183484726 + MIR SINE MIR 67 145 -63 21 36 0 0 chr5 19600883 19600911 -183484621 + AT_rich Low_complexity Low_complexity 1 28 0 266 273 71 30 chr5 19601224 19601323 -183484209 - L2 LINE L2 -3 3269 3167 225 362 38 0 chr5 19601746 19601851 -183483681 + MIR SINE MIR 102 210 -52 227 385 19 10 chr5 19603035 19603139 -183482393 + MIR3 SINE MIR 52 156 -52 418 352 6 6 chr5 19603149 19603328 -183482204 - MER117 DNA MER1_type -18 179 1 1767 146 42 74 chr5 19604408 19604811 -183480721 - MLT1B LTR MaLR 0 390 1 334 207 155 78 chr5 19604836 19604952 -183480580 - MIR SINE MIR -46 216 92 577 159 0 0 chr5 19605010 19605098 -183480434 + 5S rRNA rRNA 2 89 -32 2286 109 0 6 chr5 19605279 19605591 -183479941 - AluSq SINE Alu -3 310 1 180 224 96 88 chr5 19605816 19605941 -183479591 - MIR SINE MIR -85 177 52 844 212 37 5 chr5 19607453 19607642 -183477890 - MSTD LTR MaLR -2 394 200 814 113 0 43 chr5 19607668 19607682 -183477850 - MSTD LTR MaLR -261 135 122 2208 107 41 39 chr5 19607682 19608045 -183477487 + THE1B LTR MaLR 1 364 0 814 113 0 43 chr5 19608045 19608171 -183477361 - MSTD LTR MaLR -274 122 1 204 290 20 70 chr5 19608259 19608359 -183477173 - MIR SINE MIR -6 256 162 257 200 0 18 chr5 19609816 19609871 -183475661 + MIR SINE MIR 20 73 -189 2285 88 0 7 chr5 19610348 19610642 -183474890 - AluSc SINE Alu -17 292 1 728 224 141 21 chr5 19610725 19610917 -183474615 - MIR SINE MIR -43 219 5 2379 170 73 20 chr5 19611760 19612254 -183473278 + MLT2B1 LTR ERVL 1 520 0 214 266 0 47 chr5 19612976 19613040 -183472492 - L3 LINE CR1 -7 1570 1510 243 128 0 0 chr5 19613430 19613469 -183472063 - MSTB LTR MaLR 0 428 390 2337 104 3 0 chr5 19613469 19613800 -183471732 + AluSg SINE Alu 1 332 0 1760 168 29 70 chr5 19613800 19614216 -183471316 - MSTB LTR MaLR -27 399 1 582 310 27 11 chr5 19615930 19616117 -183469415 - MIR SINE MIR -50 212 23 343 244 49 0 chr5 19616851 19616974 -183468558 + MLT1D-int LTR MaLR 1243 1371 0 1414 249 70 33 chr5 19616974 19617461 -183468071 + MLT1D LTR MaLR 1 505 0 430 285 151 16 chr5 19617461 19617766 -183467766 + MLT1J1 LTR MaLR 101 446 0 614 104 10 0 chr5 19618075 19618171 -183467361 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 241 231 0 0 chr5 19618171 19618223 -183467309 + (CCTA)n Simple_repeat Simple_repeat 1 52 0 229 204 0 0 chr5 19618264 19618313 -183467219 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 292 335 48 18 chr5 19618501 19618668 -183466864 - L2 LINE L2 -289 2983 2812 25 0 0 0 chr5 19618745 19618770 -183466762 + AT_rich Low_complexity Low_complexity 1 25 0 580 253 136 68 chr5 19621461 19621844 -183463688 - LTR67 LTR ERVL -39 518 110 279 0 0 0 chr5 19621955 19621986 -183463546 + (GA)n Simple_repeat Simple_repeat 2 32 0 181 210 272 37 chr5 19621987 19622068 -183463464 + MIR3 SINE MIR 103 202 -6 547 305 26 26 chr5 19623604 19623873 -183461659 + MARNA DNA Mariner 299 567 -19 226 347 104 7 chr5 19623877 19624021 -183461511 - L3b LINE CR1 -118 1465 1308 403 296 85 40 chr5 19624035 19624211 -183461321 - MIR SINE MIR -71 191 8 13533 146 48 6 chr5 19624563 19626765 -183458767 + Tigger1 DNA MER2_type 1 2306 -112 2289 96 7 0 chr5 19626765 19627066 -183458466 - AluY SINE Alu -8 303 1 13533 146 48 6 chr5 19627066 19627184 -183458348 + Tigger1 DNA MER2_type 2306 2418 0 2187 206 52 74 chr5 19627764 19628396 -183457136 - MLT1E2 LTR MaLR -8 618 1 359 356 42 6 chr5 19628884 19629065 -183456467 + MIR SINE MIR 17 204 -58 280 350 50 0 chr5 19629090 19629210 -183456322 - L2 LINE L2 -6 3307 3182 384 178 0 0 chr5 19629285 19629358 -183456174 + CT-rich Low_complexity Low_complexity 2 74 0 260 216 0 0 chr5 19631366 19631417 -183454115 + L2 LINE L2 3262 3312 -1 1789 181 3 0 chr5 19631479 19631777 -183453755 + AluSx SINE Alu 1 299 -13 448 360 42 21 chr5 19632259 19632448 -183453084 - MER91A DNA MER1_type -3 193 1 448 297 80 42 chr5 19633122 19633361 -183452171 + MIR SINE MIR 15 262 0 680 295 135 3 chr5 19634848 19634902 -183450630 - LTR16A LTR ERVL 0 450 404 216 23 0 68 chr5 19634902 19634946 -183450586 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 680 295 135 3 chr5 19634946 19635203 -183450329 - LTR16A LTR ERVL -46 404 98 4699 167 41 4 chr5 19635676 19636597 -183448935 + L1MA4 LINE L1 5345 6299 -1 1269 243 6 9 chr5 19636588 19636930 -183448602 + L1MA9 LINE L1 5934 6274 -38 * 2177 128 0 0 chr5 19636941 19637238 -183448294 - AluSc SINE Alu -12 297 1 542 271 42 12 chr5 19637254 19637420 -183448112 + MLT1A2 LTR MaLR 156 326 -48 180 0 0 0 chr5 19637421 19637441 -183448091 + (A)n Simple_repeat Simple_repeat 1 20 0 518 301 9 32 chr5 19638129 19638345 -183447187 - MIR SINE MIR 0 262 52 219 346 45 45 chr5 19638657 19638813 -183446719 + L3 LINE CR1 137 292 -1285 335 360 42 78 chr5 19639082 19639365 -183446167 + L2 LINE L2 2995 3267 -5 190 263 229 8 chr5 19639334 19639452 -183446080 + L3 LINE CR1 957 1100 -477 * 201 276 9 148 chr5 19639613 19639830 -183445702 + L3 LINE CR1 1243 1429 -148 216 308 103 13 chr5 19641461 19641539 -183443993 + L2 LINE L2 3188 3272 0 21 0 0 0 chr5 19642364 19642385 -183443147 + AT_rich Low_complexity Low_complexity 1 21 0 980 186 64 0 chr5 19642451 19642655 -183442877 - MER20 DNA MER1_type 0 219 3 190 233 0 0 chr5 19643738 19643781 -183441751 - L2 LINE L2 0 3313 3271 282 260 73 31 chr5 19644087 19644183 -183441349 - MER5B DNA MER1_type -78 100 1 597 195 9 9 chr5 19644191 19644304 -183441228 - MER5B DNA MER1_type 0 178 66 533 261 28 28 chr5 19644333 19644475 -183441057 + MER5B DNA MER1_type 1 142 -36 185 277 134 45 chr5 19644884 19644996 -183440536 + MIR3 SINE MIR 1 122 -86 326 261 104 0 chr5 19645739 19645854 -183439678 - MER63 DNA MER1_type -309 753 1 9422 216 46 27 chr5 19645932 19649727 -183435805 + L1MA9 LINE L1 971 4690 -1858 1775 116 4 0 chr5 19649727 19649969 -183435563 + AluSx SINE Alu 37 279 -33 9422 216 46 27 chr5 19649969 19651035 -183434497 + L1MA9 LINE L1 4690 6058 -490 261 0 0 0 chr5 19651035 19651064 -183434468 + (CA)n Simple_repeat Simple_repeat 2 30 0 9422 216 46 27 chr5 19651064 19651560 -183433972 + L1MA9 LINE L1 6058 6543 -5 2242 78 51 3 chr5 19652472 19652768 -183432764 + AluY SINE Alu 1 310 -1 226 216 0 0 chr5 19653754 19653805 -183431727 - L1ME4a LINE L1 -69 6052 6002 258 239 15 112 chr5 19653827 19653961 -183431571 - MLT1H LTR MaLR -1 548 428 201 204 0 20 chr5 19654265 19654314 -183431218 + (TA)n Simple_repeat Simple_repeat 1 48 0 314 222 33 22 chr5 19654315 19654405 -183431127 + L1MC4 LINE L1 6613 6703 -1339 300 289 52 0 chr5 19654416 19654513 -183431019 + MIR SINE MIR 151 252 -10 1614 176 35 26 chr5 19654519 19654859 -183430673 + MLT1A2 LTR MaLR 1 343 -31 444 264 111 57 chr5 19654894 19655138 -183430394 - L1ME4a LINE L1 -248 5873 5600 575 250 9 0 chr5 19655423 19655539 -183429993 - FLAM_A SINE Alu -16 117 1 243 281 75 38 chr5 19656011 19656171 -183429361 - HAL1 LINE L1 -715 1792 1627 210 250 21 0 chr5 19656418 19656466 -183429066 + CT-rich Low_complexity Low_complexity 4 52 0 289 304 29 74 chr5 19656572 19656815 -183428717 - MLT1J LTR MaLR -52 459 228 23 0 0 0 chr5 19657711 19657734 -183427798 + AT_rich Low_complexity Low_complexity 1 23 0 189 213 0 0 chr5 19658375 19658422 -183427110 + GA-rich Low_complexity Low_complexity 2 48 0 2238 239 33 26 chr5 19658685 19659332 -183426200 - L1MC4a LINE L1 -146 7653 6992 180 0 0 0 chr5 19659332 19659352 -183426180 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 2238 239 33 26 chr5 19659352 19659687 -183425845 - L1MC4a LINE L1 -807 6992 6661 1004 217 8 16 chr5 19659701 19659954 -183425578 - L1M4 LINE L1 -1366 5016 4766 2782 190 9 57 chr5 19660972 19661467 -183424065 - L1MB3 LINE L1 -2 6181 5728 2240 112 0 0 chr5 19661467 19661770 -183423762 + AluSx SINE Alu 6 308 -4 2782 190 9 57 chr5 19661770 19661975 -183423557 - L1MB3 LINE L1 -455 5728 5515 * 6025 159 30 30 chr5 19661973 19663590 -183421942 - L1M4 LINE L1 -3427 2955 1332 842 243 28 0 chr5 19663581 19663795 -183421737 + L1ME LINE L1 5496 5715 -451 * 233 213 0 43 chr5 19663938 19663985 -183421547 - L2 LINE L2 -82 3190 3146 228 260 55 27 chr5 19664158 19664231 -183421301 + MER5C DNA MER1_type 20 94 -230 23 33 0 0 chr5 19664297 19664327 -183421205 + AT_rich Low_complexity Low_complexity 1 30 0 452 156 67 22 chr5 19664336 19664471 -183421061 + L1MC4 LINE L1 7902 8042 0 21 0 0 0 chr5 19664518 19664539 -183420993 + AT_rich Low_complexity Low_complexity 1 21 0 1586 248 42 48 chr5 19664594 19665094 -183420438 - MLT1D LTR MaLR -5 500 4 232 404 57 10 chr5 19665132 19665429 -183420103 - L2 LINE L2 -452 2862 2552 314 198 49 35 chr5 19665584 19665712 -183419820 - MLT2F LTR ERVL -9 654 336 484 126 76 0 chr5 19665828 19665935 -183419597 - MLT1E3 LTR MaLR -446 208 46 376 272 0 76 chr5 19665934 19666092 -183419440 - MLT2F LTR ERVL -517 146 1 * 356 186 14 14 chr5 19667939 19668079 -183417453 + GA-rich Low_complexity Low_complexity 1 140 0 417 318 19 0 chr5 19668961 19669115 -183416417 + MLT2E LTR ERVL 3 159 -469 357 189 24 94 chr5 19669217 19669293 -183416239 + MLT2E LTR ERVL 504 570 -58 1990 127 3 0 chr5 19669293 19669606 -183415926 + AluSx SINE Alu 1 314 0 357 189 24 94 chr5 19669606 19669655 -183415877 + MLT2E LTR ERVL 570 621 -7 213 284 45 0 chr5 19669827 19669894 -183415638 - L2 LINE L2 -1 3312 3243 430 269 8 0 chr5 19669908 19670027 -183415505 + MER94 DNA DNA 2 121 -13 455 233 127 57 chr5 19670550 19670778 -183414754 + MIR SINE MIR 18 261 -1 1954 102 44 4 chr5 19672398 19672705 -183412827 - AluSx SINE Alu 0 318 1 549 270 138 50 chr5 19673204 19673491 -183412041 + LTR33 LTR ERVL 100 419 -102 1300 181 33 109 chr5 19673491 19673884 -183411648 - MLT1A1 LTR MaLR 0 365 3 549 270 138 50 chr5 19673884 19673914 -183411618 + LTR33 LTR ERVL 419 445 -76 7325 156 15 12 chr5 19673914 19674942 -183410590 - Tigger1 DNA MER2_type 0 2418 1395 2248 111 3 3 chr5 19674942 19675240 -183410292 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr5 19675243 19675263 -183410269 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7325 156 15 12 chr5 19675263 19676585 -183408947 - Tigger1 DNA MER2_type -1024 1394 1 1306 168 54 19 chr5 19676609 19676937 -183408595 + MLT2C1 LTR ERVL 4 424 -37 311 287 17 17 chr5 19676937 19677052 -183408480 + (TATATG)n Simple_repeat Simple_repeat 3 117 0 2047 233 25 18 chr5 19677053 19677563 -183407969 - MLT2B3 LTR ERVL -40 514 1 790 210 74 0 chr5 19679206 19679382 -183406150 + MER5A DNA MER1_type 1 189 0 234 239 156 18 chr5 19679528 19679637 -183405895 - MIR SINE MIR -99 163 40 1240 200 42 93 chr5 19680146 19680531 -183405001 + MLT1A1 LTR MaLR 1 365 0 192 77 0 0 chr5 19681198 19681224 -183404308 + (CAGAA)n Simple_repeat Simple_repeat 1 26 0 423 230 52 63 chr5 19682257 19682431 -183403101 - MER34B LTR ERV1 0 565 394 354 194 0 0 chr5 19682702 19682769 -183402763 - MER34 LTR ERV1 -473 69 3 306 268 12 20 chr5 19682780 19682896 -183402636 - MIR SINE MIR -78 130 19 2107 173 10 18 chr5 19684279 19684672 -183400860 - MLT1B LTR MaLR 0 390 1 285 75 0 0 chr5 19684837 19684877 -183400655 + (ATG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 19685139 19685160 -183400372 + AT_rich Low_complexity Low_complexity 1 21 0 2161 108 0 26 chr5 19685393 19685698 -183399834 - AluSq SINE Alu -16 297 1 268 243 14 27 chr5 19685990 19686064 -183399468 + CT-rich Low_complexity Low_complexity 6 78 0 574 224 17 103 chr5 19686160 19686392 -183399140 + MLT1F1 LTR MaLR 7 218 -324 * 855 219 85 0 chr5 19686379 19686603 -183398929 + MLT1F1 LTR MaLR 323 565 -2 681 311 55 21 chr5 19686655 19686944 -183398588 + L2 LINE L2 3014 3312 -1 1666 245 66 32 chr5 19687463 19687986 -183397546 + L2 LINE L2 2451 3000 -313 2821 74 3 11 chr5 19687986 19688363 -183397169 + THE1C LTR MaLR 2 375 0 1666 245 66 32 chr5 19688363 19688526 -183397006 + L2 LINE L2 3000 3156 -157 213 244 0 0 chr5 19688552 19688597 -183396935 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 259 111 0 0 chr5 19688704 19688740 -183396792 - MER5A DNA MER1_type -150 39 4 914 176 11 11 chr5 19688751 19688938 -183396594 - MER3 DNA MER1_type -5 204 18 1021 166 0 6 chr5 19688953 19689134 -183396398 - MER3 DNA MER1_type -24 185 6 384 233 42 33 chr5 19689148 19689268 -183396264 + L2 LINE L2 3192 3312 -1 264 341 159 16 chr5 19689272 19689398 -183396134 + L2 LINE L2 3126 3269 -3 299 65 22 0 chr5 19690521 19690567 -183394965 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2148 131 3 0 chr5 19692657 19692962 -183392570 + AluSx SINE Alu 1 306 -6 2132 137 0 13 chr5 19693049 19693364 -183392168 + AluSx SINE Alu 1 311 -1 1466 208 0 14 chr5 19695082 19695371 -183390161 + AluJb SINE Alu 2 286 -26 504 0 0 0 chr5 19695371 19695427 -183390105 + (TA)n Simple_repeat Simple_repeat 2 57 0 280 309 24 0 chr5 19695741 19695825 -183389707 + L2 LINE L2 3228 3313 0 192 296 182 0 chr5 19695898 19695986 -183389546 + L2 LINE L2 3201 3304 -9 2274 97 3 3 chr5 19695988 19696287 -183389245 - AluSc SINE Alu -9 300 2 488 79 53 0 chr5 19697832 19697908 -183387624 - MADE1 DNA Mariner 0 80 1 746 253 18 27 chr5 19698021 19698242 -183387290 + MER46C DNA MER2_type 19 237 -101 272 191 95 0 chr5 19700480 19700543 -183384989 - MIR SINE MIR -79 129 61 191 326 59 30 chr5 19702668 19702803 -183382729 + L2 LINE L2 2603 2741 -573 2777 152 57 50 chr5 19703028 19703648 -183381884 + L1MB2 LINE L1 5544 6167 -4 250 224 0 0 chr5 19705106 19705155 -183380377 + L1ME4a LINE L1 5967 6015 -106 296 175 16 0 chr5 19705226 19705289 -183380243 + (TA)n Simple_repeat Simple_repeat 2 65 0 319 24 0 0 chr5 19755934 19755975 -183329557 - L1PB1 LINE L1 -254 5897 5857 1707 73 30 0 chr5 19755975 19756198 -183329334 + L1PB1 LINE L1 5911 6151 0 1405 176 20 26 chr5 19756204 19756329 -183329203 + L1M2 LINE L1 5177 5301 -990 1059 139 0 0 chr5 19756329 19756509 -183329023 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1405 176 20 26 chr5 19756509 19756788 -183328744 + L1M2 LINE L1 5301 5573 -718 2139 151 64 25 chr5 19757334 19757738 -183327794 + MSTA LTR MaLR 5 424 -4 22 0 0 0 chr5 19758323 19758345 -183327187 + AT_rich Low_complexity Low_complexity 1 22 0 339 271 17 25 chr5 19758477 19758595 -183326937 + L2 LINE L2 3192 3308 -5 254 188 16 16 chr5 19759322 19759386 -183326146 - MER58B DNA MER1_type 0 341 278 836 233 30 34 chr5 19759390 19759716 -183325816 + MER92B LTR ERV1 94 634 -2 * 1508 209 103 2 chr5 19759716 19760115 -183325417 + Charlie1 DNA MER1_type 576 1015 -1746 323 186 76 25 chr5 19760114 19760232 -183325300 + Charlie1 DNA MER1_type 2638 2761 0 * 242 232 0 0 chr5 19760446 19760507 -183325025 + (TTA)n Simple_repeat Simple_repeat 1 61 0 395 267 0 27 chr5 19760641 19760787 -183324745 + T-rich Low_complexity Low_complexity 4 145 0 1724 190 128 54 chr5 19761784 19762427 -183323105 - LTR1B LTR ERV1 0 826 137 358 288 15 17 chr5 19762543 19762700 -183322832 + L1ME1 LINE L1 5455 5590 -572 416 248 16 36 chr5 19762700 19763315 -183322217 + (TATATG)n Simple_repeat Simple_repeat 1 602 0 468 245 0 33 chr5 19763334 19763518 -183322014 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 310 268 0 62 chr5 19763542 19763639 -183321893 + L1MC4 LINE L1 6615 6705 -1337 306 337 0 0 chr5 19763582 19763671 -183321861 - L1MC4 LINE L1 -1340 6702 6614 * 212 220 20 0 chr5 19763672 19763722 -183321810 + (TA)n Simple_repeat Simple_repeat 1 51 0 1494 227 79 49 chr5 19763722 19763938 -183321594 + L1ME1 LINE L1 5613 5821 -345 476 32 16 0 chr5 19763938 19764000 -183321532 + (CA)n Simple_repeat Simple_repeat 2 64 0 1494 227 79 49 chr5 19764000 19764316 -183321216 + L1ME1 LINE L1 5821 6161 -5 477 280 0 0 chr5 19765034 19765134 -183320398 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 19765151 19765174 -183320358 + AT_rich Low_complexity Low_complexity 1 23 0 2486 65 0 3 chr5 19765276 19765585 -183319947 - AluY SINE Alu -3 308 1 2266 81 3 0 chr5 19768066 19768372 -183317160 + AluSp SINE Alu 1 307 0 1263 238 59 0 chr5 19769605 19769925 -183315607 + MER58B DNA MER1_type 1 339 -2 2293 169 24 10 chr5 19770249 19770664 -183314868 + MSTB LTR MaLR 1 421 -5 568 314 207 5 chr5 19770670 19771056 -183314476 + L2 LINE L2 2199 2662 -652 1236 154 9 9 chr5 19772220 19772453 -183313079 + LTR1 LTR ERV1 1 233 -552 630 60 0 0 chr5 19772585 19772668 -183312864 + (TCCCC)n Simple_repeat Simple_repeat 2 84 0 2036 142 3 0 chr5 19772668 19772963 -183312569 - AluSg SINE Alu -14 296 1 184 70 47 47 chr5 19773198 19773241 -183312291 + T-rich Low_complexity Low_complexity 2 44 0 707 185 143 37 chr5 19773271 19773460 -183312072 + MER3 DNA MER1_type 1 209 0 754 215 33 56 chr5 19773639 19773853 -183311679 + MER58A DNA MER1_type 1 209 -15 2166 105 22 29 chr5 19774246 19774561 -183310971 - AluSq SINE Alu 0 313 1 285 264 107 8 chr5 19775068 19775189 -183310343 + MLT1H1 LTR MaLR 422 554 -1 2343 99 0 3 chr5 19775450 19775754 -183309778 + AluSx SINE Alu 1 303 -9 3041 127 82 24 chr5 19775833 19776331 -183309201 + MER1A DNA MER1_type 1 527 0 347 361 5 25 chr5 19776396 19776598 -183308934 - L2 LINE L2 -3 3310 3113 273 341 157 18 chr5 19776617 19776834 -183308698 - L2 LINE L2 -885 2429 2183 850 228 133 34 chr5 19777141 19777240 -183308292 + L1M4 LINE L1 2735 2823 -3323 2287 111 0 9 chr5 19777240 19777555 -183307977 + AluSq SINE Alu 1 312 -1 850 228 133 34 chr5 19777555 19778065 -183307467 + L1M4 LINE L1 2823 3404 -2742 1159 133 5 0 chr5 19778157 19778353 -183307179 - L1MA2 LINE L1 0 6304 6108 742 69 0 0 chr5 19778410 19778511 -183307021 - L1P1 LINE L1 -414 5741 5641 * 3591 60 12 10 chr5 19778431 19778928 -183306604 + L1PA2 LINE L1 5657 6154 -1 1245 284 164 23 chr5 19778927 19780087 -183305445 + L1M4 LINE L1 3528 4850 -1296 * 664 200 0 13 chr5 19780182 19780337 -183305195 + L1MB8 LINE L1 6025 6177 -1 1213 273 99 13 chr5 19780352 19780818 -183304714 + L1MEc LINE L1 233 738 -5658 2753 207 39 12 chr5 19780838 19781586 -183303946 - L1M4 LINE L1 -981 5165 4398 25998 31 0 0 chr5 19781588 19785509 -183300023 - L1PA3 LINE L1 -3 6152 2233 14789 57 3 4 chr5 19785509 19787458 -183298074 - L1PA3 LINE L1 -4191 1955 9 868 193 0 0 chr5 19787467 19787664 -183297868 - L1M4 LINE L1 -1717 4429 4233 * 895 236 71 3 chr5 19787659 19787955 -183297577 + L1M4 LINE L1 5088 5403 -743 387 0 0 0 chr5 19790049 19790092 -183295440 + (CA)n Simple_repeat Simple_repeat 2 44 0 295 320 109 39 chr5 19790724 19790852 -183294680 - L2 LINE L2 -33 3239 3103 2381 102 0 3 chr5 19791303 19791617 -183293915 + AluSp SINE Alu 1 313 0 932 151 19 73 chr5 19792530 19792735 -183292797 - MER20 DNA MER1_type -25 194 1 207 0 0 0 chr5 19795276 19795299 -183290233 + (T)n Simple_repeat Simple_repeat 1 23 0 256 321 63 31 chr5 19795422 19795581 -183289951 - MIR SINE MIR -70 192 29 2267 103 7 0 chr5 19796564 19796864 -183288668 - AluSp SINE Alu 0 313 12 17874 27 6 0 chr5 19797174 19800086 -183285446 + L1PA4 LINE L1 3240 6148 -7 337 271 47 9 chr5 19800391 19800498 -183285034 - MIR3 SINE MIR -6 202 92 197 189 170 19 chr5 19801244 19801297 -183284235 + L2 LINE L2 3253 3313 0 1042 263 100 15 chr5 19801742 19802141 -183283391 + MLT2B1 LTR ERVL 1 433 -87 34 42 0 0 chr5 19802197 19802245 -183283287 + AT_rich Low_complexity Low_complexity 1 48 0 269 88 48 6 chr5 19802281 19802336 -183283196 + MLT2C2 LTR ERVL 397 464 0 26 30 0 0 chr5 19802823 19802856 -183282676 + AT_rich Low_complexity Low_complexity 1 33 0 393 22 0 0 chr5 19803322 19803368 -183282164 + (CA)n Simple_repeat Simple_repeat 2 47 0 1882 163 3 3 chr5 19804251 19804540 -183280992 - AluSx SINE Alu -23 289 1 1586 170 35 84 chr5 19804759 19805012 -183280520 - MSTB1 LTR MaLR 0 432 209 3204 116 8 25 chr5 19805012 19805530 -183280002 - MER75 DNA T2_type -2 512 4 1586 170 35 84 chr5 19805530 19805730 -183279802 - MSTB1 LTR MaLR -223 209 1 2230 124 0 0 chr5 19806907 19807205 -183278327 + AluSx SINE Alu 2 299 -13 2936 37 3 0 chr5 19807262 19807616 -183277916 + L1PA5 LINE L1 5792 6146 -8 182 62 31 0 chr5 19807630 19807662 -183277870 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 202 247 65 39 chr5 19807705 19807782 -183277750 - L2 LINE L2 -1 3312 3234 2322 97 0 25 chr5 19809362 19809683 -183275849 + AluSq SINE Alu 1 313 0 502 245 0 0 chr5 19809746 19809885 -183275647 - L1MB7 LINE L1 -52 6132 5994 1324 234 118 60 chr5 19810464 19811149 -183274383 + MER50 LTR ERV1 10 734 0 1775 110 91 19 chr5 19812163 19812471 -183273061 + AluSq SINE Alu 1 327 0 1126 184 14 5 chr5 19814431 19814648 -183270884 + MER20 DNA MER1_type 1 219 0 767 183 178 4 chr5 19814802 19815032 -183270500 + MLT1E1 LTR MaLR 1 270 -384 1097 213 16 4 chr5 19815073 19815317 -183270215 + MLT1E1 LTR MaLR 403 649 -5 2265 124 0 0 chr5 19815326 19815632 -183269900 + AluSx SINE Alu 5 310 -2 2024 135 58 6 chr5 19815771 19816118 -183269414 + MLT1A1 LTR MaLR 1 365 0 288 267 113 51 chr5 19816510 19816705 -183268827 + MIR3 SINE MIR 2 208 0 21 0 0 0 chr5 19816792 19816813 -183268719 + AT_rich Low_complexity Low_complexity 1 21 0 190 277 85 32 chr5 19817509 19817603 -183267929 - MIR SINE MIR 0 262 164 530 209 13 20 chr5 19817603 19817756 -183267776 - MER106B DNA MER1_type 0 1059 908 1946 156 13 7 chr5 19817885 19818192 -183267340 - AluJo SINE Alu -3 309 1 2529 222 52 21 chr5 19818196 19818827 -183266705 + MER82 DNA MER2_type 1 651 -2 560 252 50 71 chr5 19818895 19819133 -183266399 + MIR SINE MIR 23 255 -7 2076 108 44 36 chr5 19819665 19820025 -183265507 + THE1B LTR MaLR 2 364 0 438 171 12 0 chr5 19820483 19820565 -183264967 + MLT1F1 LTR MaLR 1 83 -484 274 197 155 0 chr5 19820569 19820640 -183264892 + MER5A DNA MER1_type 105 186 -3 231 329 43 29 chr5 19820815 19820955 -183264577 + MIR SINE MIR 11 152 -110 1928 130 19 82 chr5 19821003 19821427 -183264105 - MLT2C1 LTR ERVL 0 397 1 34 55 0 0 chr5 19821747 19821802 -183263730 + AT_rich Low_complexity Low_complexity 1 55 0 204 179 0 0 chr5 19823585 19823624 -183261908 + (TG)n Simple_repeat Simple_repeat 2 40 0 257 176 54 0 chr5 19823865 19823939 -183261593 - L1MA9 LINE L1 -22 6290 6213 2251 186 19 11 chr5 19824129 19824607 -183260925 - L1MB4 LINE L1 0 6180 5699 287 216 0 0 chr5 19825379 19825455 -183260077 + AluS SINE Alu 229 304 0 551 169 0 0 chr5 19825623 19825712 -183259820 - AluSg/x SINE Alu -17 295 207 1555 169 4 0 chr5 19825712 19825948 -183259584 - AluSx SINE Alu -75 237 1 574 255 66 66 chr5 19826263 19826475 -183259057 + MIR SINE MIR 21 232 -30 1748 159 10 24 chr5 19826671 19826966 -183258566 + AluJo SINE Alu 9 299 -13 269 364 10 0 chr5 19827229 19827328 -183258204 + L2 LINE L2 3133 3232 -40 1459 224 35 13 chr5 19827569 19827944 -183257588 - MLT1C LTR MaLR -34 433 51 4431 143 22 7 chr5 19829291 19830002 -183255530 + MER72 LTR ERV1 1 722 0 198 330 74 74 chr5 19830038 19830214 -183255318 + MIR3 SINE MIR 10 185 -23 216 0 0 0 chr5 19832336 19832360 -183253172 + (T)n Simple_repeat Simple_repeat 1 24 0 3183 164 38 38 chr5 19832555 19833183 -183252349 - MER21B LTR ERV1 -24 839 212 594 167 0 10 chr5 19833351 19833453 -183252079 - FLAM_C SINE Alu -19 124 24 216 325 26 60 chr5 19833703 19833854 -183251678 + MIR3 SINE MIR 37 182 -26 552 284 175 0 chr5 19834064 19834275 -183251257 + MIR SINE MIR 5 252 -10 381 160 13 0 chr5 19835848 19835923 -183249609 - MER116 DNA Mariner -4 76 1 2095 127 0 0 chr5 19836322 19836614 -183248918 - AluSx SINE Alu -20 292 1 350 287 115 32 chr5 19837362 19837519 -183248013 - MIR SINE MIR -33 229 60 211 264 231 22 chr5 19837619 19837710 -183247822 + MIR SINE MIR 23 132 -76 2303 92 0 3 chr5 19837849 19838143 -183247389 + AluSc SINE Alu 4 296 -13 2495 68 0 0 chr5 19838412 19838708 -183246824 - AluY SINE Alu -15 296 1 259 378 140 7 chr5 19839254 19839561 -183245971 - L2 LINE L2 -375 2939 2592 2008 148 135 5 chr5 19840249 19840628 -183244904 - MSTA LTR MaLR 0 428 1 2419 83 0 3 chr5 19841169 19841471 -183244061 + AluSq SINE Alu 1 301 -12 405 295 0 0 chr5 19842157 19842262 -183243270 + MIR SINE MIR 73 177 -85 398 339 95 31 chr5 19842273 19842929 -183242603 - L2 LINE L2 -29 3284 2527 203 321 74 12 chr5 19844533 19844614 -183240918 - L2 LINE L2 -1 3312 3227 368 260 110 14 chr5 19844656 19844802 -183240730 + L1ME3A LINE L1 5628 5787 -383 606 287 29 55 chr5 19844802 19845074 -183240458 + L2 LINE L2 3047 3311 -2 345 257 20 20 chr5 19845074 19845175 -183240357 + GA-rich Low_complexity Low_complexity 1 101 0 290 293 0 10 chr5 19845191 19845290 -183240242 + L1ME3A LINE L1 5808 5905 -265 2063 215 44 40 chr5 19845292 19846035 -183239497 - L1MA9 LINE L1 -743 5403 4658 * 3274 160 47 68 chr5 19846033 19846913 -183238619 + L1MA9 LINE L1 5410 6270 -42 185 222 67 22 chr5 19848316 19848361 -183237171 + MIR SINE MIR 94 140 -68 328 303 0 20 chr5 19848793 19848892 -183236640 - MIR SINE MIR -11 251 155 965 191 65 8 chr5 19849663 19849925 -183235607 - L1MB4 LINE L1 -6 6174 5898 23 33 0 0 chr5 19850444 19850474 -183235058 + AT_rich Low_complexity Low_complexity 1 30 0 2236 70 7 7 chr5 19850592 19850877 -183234655 + AluY SINE Alu 2 286 -25 1950 181 123 23 chr5 19851271 19851702 -183233830 + MLT2B1 LTR ERVL 1 474 -46 847 57 51 23 chr5 19851715 19851890 -183233642 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 368 71 18 0 chr5 19851988 19852044 -183233488 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 213 65 0 0 chr5 19852611 19852642 -183232890 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 279 316 173 0 chr5 19853099 19853232 -183232300 - MER5A DNA MER1_type 0 189 34 284 284 45 58 chr5 19853270 19853425 -183232107 + MIR SINE MIR 91 243 -19 236 214 0 0 chr5 19854177 19854219 -183231313 + MIR SINE MIR 106 147 -115 370 354 62 85 chr5 19854221 19854729 -183230803 - L2 LINE L2 0 3272 2792 2369 96 0 0 chr5 19854729 19855030 -183230502 - AluSc SINE Alu -8 301 1 370 354 62 85 chr5 19855030 19855213 -183230319 - L2 LINE L2 -480 2792 2606 230 291 133 86 chr5 19855231 19855660 -183229872 - L2 LINE L2 -939 2375 1927 1517 179 65 17 chr5 19858056 19858408 -183227124 - MER58D DNA MER1_type -11 375 7 226 255 0 0 chr5 19858559 19858610 -183226922 - MIR SINE MIR -3 259 209 1410 148 63 77 chr5 19858655 19859006 -183226526 + MER4A LTR ERV1 1 346 -318 594 92 242 25 chr5 19859101 19859221 -183226311 + MER4C LTR ERV1 300 445 -20 435 258 13 5 chr5 19859251 19859392 -183226140 - MIR SINE MIR -62 146 33 470 252 34 20 chr5 19859445 19859592 -183225940 + MARNA DNA Mariner 12 160 -426 2416 205 42 7 chr5 19859953 19860406 -183225126 + MER70A LTR ERVL 4 472 0 261 309 31 80 chr5 19860745 19860907 -183224625 + L2 LINE L2 2231 2384 -930 1103 194 63 63 chr5 19861011 19861082 -183224450 - MER33 DNA MER1_type -2266 319 249 2124 131 0 16 chr5 19861082 19861250 -183224282 - AluSx SINE Alu -11 301 139 2294 98 0 0 chr5 19861250 19861547 -183223985 - AluSx SINE Alu -15 297 1 2124 131 0 16 chr5 19861547 19861684 -183223848 - AluSx SINE Alu -173 139 1 1103 194 63 63 chr5 19861684 19861931 -183223601 - MER33 DNA MER1_type -2335 250 1 240 155 138 0 chr5 19862364 19862422 -183223110 + L2 LINE L2 3188 3253 -60 231 278 0 0 chr5 19862545 19862599 -183222933 + L2 LINE L2 3215 3268 -4 1870 121 0 4 chr5 19863533 19863805 -183221727 - MER66B LTR ERV1 0 486 216 479 222 0 26 chr5 19863807 19863924 -183221608 - MER66B LTR ERV1 -372 114 1 2327 153 31 0 chr5 19864365 19864718 -183220814 + THE1B LTR MaLR 1 364 0 519 231 75 81 chr5 19865756 19865987 -183219545 + L1MC4a LINE L1 5822 6052 -1756 2284 116 0 0 chr5 19865987 19866288 -183219244 + AluSx SINE Alu 1 301 -11 519 231 75 81 chr5 19866288 19866351 -183219181 + L1MC4a LINE L1 6052 6114 -1694 229 65 0 0 chr5 19866353 19866399 -183219133 - LTR66 LTR ERVL -171 439 394 233 232 0 37 chr5 19866401 19866483 -183219049 - L1MC4 LINE L1 -1347 6695 6617 * 259 160 187 0 chr5 19866411 19866486 -183219046 + L1MC4 LINE L1 6617 6705 -1337 428 296 8 0 chr5 19866616 19866741 -183218791 + L1MC4 LINE L1 7793 7918 -124 186 133 0 0 chr5 19866755 19866785 -183218747 + (CA)n Simple_repeat Simple_repeat 1 30 0 1693 202 8 60 chr5 19866874 19867255 -183218277 + MLT1A1 LTR MaLR 5 365 0 5889 135 26 14 chr5 19870523 19870623 -183214909 + L1MC1 LINE L1 5351 5448 -885 1888 143 77 44 chr5 19870623 19870986 -183214546 - THE1C LTR MaLR 0 375 1 10368 120 26 42 chr5 19870987 19872591 -183212941 - MSTA-int LTR MaLR -1 1579 3 1923 143 172 21 chr5 19872593 19872965 -183212567 - MSTA LTR MaLR 0 428 1 5889 135 26 14 chr5 19872965 19873829 -183211703 + L1MC1 LINE L1 5448 6331 -2 545 285 98 32 chr5 19874643 19874959 -183210573 + L2 LINE L2 2174 2510 -804 347 323 36 12 chr5 19875733 19875900 -183209632 - MIR SINE MIR -10 252 82 279 122 0 0 chr5 19876614 19876663 -183208869 + (CTATA)n Simple_repeat Simple_repeat 4 52 0 1727 211 62 57 chr5 19876860 19877297 -183208235 + MER77 LTR ERV1 167 605 0 306 250 0 13 chr5 19877493 19877569 -183207963 + L3 LINE CR1 1096 1170 -407 271 258 61 74 chr5 19877604 19877767 -183207765 - MLT1J LTR MaLR -49 462 302 2426 57 0 10 chr5 19878146 19878446 -183207086 + AluY SINE Alu 1 297 -14 3449 139 43 0 chr5 19878469 19879022 -183206510 + L1MA8 LINE L1 5708 6284 -7 23 0 0 0 chr5 19879025 19879048 -183206484 + AT_rich Low_complexity Low_complexity 1 23 0 2195 148 33 33 chr5 19879084 19879448 -183206084 + THE1B LTR MaLR 1 364 0 279 284 45 23 chr5 19879998 19880086 -183205446 + L3 LINE CR1 1481 1570 -7 373 288 34 0 chr5 19880143 19880261 -183205271 + L1ME4a LINE L1 5973 6094 -27 209 196 0 39 chr5 19882158 19882209 -183203323 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 220 289 53 13 chr5 19882297 19882373 -183203159 + MIR SINE MIR 63 141 -67 641 266 48 19 chr5 19882603 19882810 -183202722 - MIR SINE MIR 0 262 50 392 292 112 29 chr5 19883894 19884222 -183201310 + MLT1J LTR MaLR 9 328 -122 2436 74 0 3 chr5 19884260 19884557 -183200975 - AluY SINE Alu -15 296 1 630 211 105 37 chr5 19884694 19884884 -183200648 + MER3 DNA MER1_type 1 203 -6 237 164 91 0 chr5 19886479 19886534 -183198998 + HsTC2 DNA Tc2 1233 1292 -606 809 252 57 9 chr5 19886577 19886807 -183198725 - MIR SINE MIR -21 241 1 4427 78 7 4 chr5 19887468 19888020 -183197512 + MER41A LTR ERV1 1 554 0 180 97 0 0 chr5 19888357 19888388 -183197144 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2157 103 3 0 chr5 19888482 19888772 -183196760 - AluSx SINE Alu -21 291 1 274 310 78 47 chr5 19888833 19888962 -183196570 + L2 LINE L2 3126 3258 -14 238 227 18 100 chr5 19889165 19889275 -183196257 + L2 LINE L2 2430 2530 -784 1900 128 83 0 chr5 19889567 19889855 -183195677 + AluSx SINE Alu 1 312 0 1932 59 0 0 chr5 19890582 19890819 -183194713 + AluY SINE Alu 75 311 0 2433 104 28 43 chr5 19890846 19891275 -183194257 - THE1C LTR MaLR 0 375 1 181 387 44 29 chr5 19891480 19891684 -183193848 - L2 LINE L2 -213 3059 2853 377 382 7 13 chr5 19892436 19892588 -183192944 + MIR3 SINE MIR 10 160 -48 881 256 100 14 chr5 19892745 19893088 -183192444 - LTR16A LTR ERVL 0 457 60 218 250 243 40 chr5 19893222 19893370 -183192162 + MIR SINE MIR 25 202 -6 21 0 0 0 chr5 19893932 19893953 -183191579 + AT_rich Low_complexity Low_complexity 1 21 0 266 235 39 29 chr5 19896056 19896180 -183189352 + MIR SINE MIR 96 216 -46 419 256 103 54 chr5 19896815 19897057 -183188475 + MIR SINE MIR 9 262 0 200 263 0 40 chr5 19897237 19897313 -183188219 + CT-rich Low_complexity Low_complexity 2 74 0 584 266 168 12 chr5 19899228 19899472 -183186060 - L3 LINE CR1 -40 1537 1256 1851 158 6 29 chr5 19899498 19899785 -183185747 + MER47A DNA MER2_type 27 306 -2017 2086 116 3 0 chr5 19899785 19900069 -183185463 - AluSq SINE Alu -24 289 5 1851 158 6 29 chr5 19900069 19900129 -183185403 + MER47A DNA MER2_type 306 366 0 1679 203 14 28 chr5 19900957 19901317 -183184215 + MLT1A1 LTR MaLR 11 365 0 3369 195 82 1 chr5 19901330 19902001 -183183531 + MER44D DNA MER2_type 1 597 -8 328 294 24 141 chr5 19902062 19902439 -183183093 + L2 LINE L2 2981 3313 0 696 288 18 9 chr5 19902442 19902668 -183182864 + MIR SINE MIR 29 256 -6 306 224 0 0 chr5 19903763 19903821 -183181711 - MER5A DNA MER1_type -118 71 14 2550 118 30 23 chr5 19904081 19904378 -183181154 - MER57B LTR ERV1 0 434 131 2098 120 0 0 chr5 19904378 19904696 -183180836 - AluSx SINE Alu 0 318 1 2550 118 30 23 chr5 19904696 19904828 -183180704 - MER57B LTR ERV1 -303 131 1 288 77 0 0 chr5 19905941 19905980 -183179552 + (CA)n Simple_repeat Simple_repeat 2 40 0 411 282 90 115 chr5 19907111 19907753 -183177779 + L1M2 LINE L1 530 1155 -5694 182 175 0 35 chr5 19908556 19908613 -183176919 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2391 116 79 20 chr5 19909143 19909547 -183175985 - MSTC LTR MaLR 0 428 1 213 255 61 133 chr5 19909722 19909820 -183175712 - MIR3 SINE MIR -51 157 67 352 293 47 0 chr5 19910357 19910463 -183175069 + L2 LINE L2 3162 3272 0 3029 202 116 33 chr5 19910784 19911689 -183173843 + L1MDa LINE L1 617 1596 -4944 1414 141 101 4 chr5 19911689 19911965 -183173567 + L1MD1 LINE L1 5930 6232 -10 356 299 77 1 chr5 19913288 19913430 -183172102 - MIR SINE MIR -49 213 63 310 160 28 57 chr5 19913755 19913861 -183171671 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2448 125 77 10 chr5 19914379 19914780 -183170752 - MSTA LTR MaLR 0 428 1 384 283 37 64 chr5 19914785 19914972 -183170560 - MLT1J2 LTR MaLR -4 446 265 407 230 20 0 chr5 19915029 19915129 -183170403 - MLT1J LTR MaLR -325 186 85 871 320 46 38 chr5 19915241 19915635 -183169897 - L2 LINE L2 -37 3276 2880 1276 321 158 45 chr5 19916078 19916486 -183169046 - L2 LINE L2 -426 2888 2527 1477 173 70 11 chr5 19916486 19916770 -183168762 + AluJo SINE Alu 7 307 -5 1276 321 158 45 chr5 19916770 19917668 -183167864 - L2 LINE L2 -787 2527 1435 364 329 71 52 chr5 19918226 19918332 -183167200 + LTR16A LTR ERVL 130 233 -217 884 257 23 0 chr5 19918332 19918546 -183166986 - MER20 DNA MER1_type 0 219 1 364 329 71 52 chr5 19918546 19918649 -183166883 + LTR16A LTR ERVL 233 343 -107 460 300 94 23 chr5 19918715 19919022 -183166510 + HERV16 LTR ERVL 13 341 -4655 461 349 37 0 chr5 19919106 19919324 -183166208 + LTR16A LTR ERVL 172 397 -53 382 328 102 4 chr5 19919381 19919616 -183165916 + L2 LINE L2 1705 1962 -1352 1313 256 152 72 chr5 19919646 19919856 -183165676 + L2 LINE L2 639 831 -2483 2493 158 9 21 chr5 19919856 19920287 -183165245 + MSTC LTR MaLR 3 428 0 1313 256 152 72 chr5 19920287 19921000 -183164532 + L2 LINE L2 831 1635 -1679 976 291 77 31 chr5 19921041 19921457 -183164075 + LTR16C LTR ERVL 57 491 0 2238 298 65 48 chr5 19921523 19921997 -183163535 + L2 LINE L2 1765 2230 -1084 1062 119 24 0 chr5 19921997 19922165 -183163367 - L1MA3 LINE L1 0 6305 6134 2238 298 65 48 chr5 19922165 19922704 -183162828 + L2 LINE L2 2230 2795 -519 1841 177 0 13 chr5 19923354 19923664 -183161868 + AluJb SINE Alu 1 306 -6 2163 188 65 62 chr5 19924537 19925165 -183160367 + LTR8A LTR ERV1 45 674 -53 299 291 43 10 chr5 19927603 19927722 -183157810 - MIR3 SINE MIR -6 202 78 2289 113 0 0 chr5 19927750 19928051 -183157481 + AluSx SINE Alu 1 301 -11 2098 133 48 25 chr5 19928759 19929113 -183156419 - THE1B LTR MaLR 0 364 3 3231 111 62 0 chr5 19929115 19929612 -183155920 - THE1B-int LTR MaLR 0 1580 1053 246 62 0 0 chr5 19929610 19929642 -183155890 - THE1B-int LTR MaLR -1548 32 1 * 2306 112 48 31 chr5 19929642 19930000 -183155532 - THE1B LTR MaLR 0 364 1 850 51 8 17 chr5 19931114 19931231 -183154301 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 19931231 19931251 -183154281 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1695 101 0 0 chr5 19931305 19931542 -183153990 - L1PA8 LINE L1 -11 6161 5925 2166 130 0 0 chr5 19934240 19934548 -183150984 - AluSx SINE Alu -2 310 3 192 300 56 56 chr5 19934720 19934810 -183150722 - L3b LINE CR1 -94 1489 1400 2208 124 0 0 chr5 19935145 19935444 -183150088 - AluSx SINE Alu -13 299 1 189 253 147 27 chr5 19935738 19935813 -183149719 - MIR SINE MIR -69 139 56 1926 144 27 3 chr5 19936590 19936882 -183148650 - AluSx SINE Alu -12 300 2 2479 68 10 0 chr5 19936965 19937272 -183148260 + AluY SINE Alu 1 310 -1 3846 146 140 7 chr5 19937551 19938279 -183147253 + LTR1B LTR ERV1 2 826 0 209 301 55 0 chr5 19938339 19938412 -183147120 + MIR SINE MIR 71 147 -115 643 272 72 38 chr5 19938798 19939033 -183146499 - MIR SINE MIR -16 246 4 2154 176 5 17 chr5 19940322 19940679 -183144853 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 19940679 19940704 -183144828 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 19940704 19940756 -183144776 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 19940757 19941469 -183144063 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 19941547 19941678 -183143854 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 19941679 19942138 -183143394 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 19942607 19942726 -183142806 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 19942867 19943382 -183142150 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 19943382 19943684 -183141848 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 19943684 19943846 -183141686 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 19943855 19949181 -183136351 + L1M3f LINE L1 4 5525 -803 2016 172 36 33 chr5 19949181 19949731 -183135801 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 19949731 19949837 -183135695 + L1PA16 LINE L1 5339 5444 -859 * 10347 162 20 7 chr5 19949832 19950644 -183134888 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 19950644 19951047 -183134485 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 19951047 19953291 -183132241 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 19953291 19953746 -183131786 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 19953746 19953793 -183131739 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 19954230 19954544 -183130988 - AluSx SINE Alu 0 312 1 513 286 26 16 chr5 19954980 19955169 -183130363 + LTR16C LTR ERVL 301 491 0 1539 192 36 9 chr5 19957677 19958010 -183127522 - L1PA16 LINE L1 -22 6144 5803 495 355 52 16 chr5 19958239 19958605 -183126927 - LTR16C LTR ERVL 0 491 113 271 109 0 78 chr5 19959073 19959137 -183126395 - Alu SINE Alu -1 301 243 389 268 32 24 chr5 19960578 19960701 -183124831 - MIR3 SINE MIR -18 190 67 1844 214 36 42 chr5 19962292 19962656 -183122876 - MLT1D LTR MaLR -13 492 130 1823 146 93 74 chr5 19962656 19962725 -183122807 - MSTB LTR MaLR 0 426 360 2073 145 0 0 chr5 19962725 19963021 -183122511 - AluSq SINE Alu -17 296 1 1823 146 93 74 chr5 19963021 19963369 -183122163 - MSTB LTR MaLR -66 360 1 1844 214 36 42 chr5 19963369 19963499 -183122033 - MLT1D LTR MaLR -375 130 1 1335 256 62 41 chr5 19963598 19963946 -183121586 - MER74B LTR ERVL -67 555 193 2325 95 0 0 chr5 19963946 19964241 -183121291 - AluSc SINE Alu -14 295 1 1335 256 62 41 chr5 19964241 19964380 -183121152 - MER74B LTR ERVL -429 193 58 192 40 0 0 chr5 19965399 19965424 -183120108 + (CA)n Simple_repeat Simple_repeat 2 26 0 1616 154 49 10 chr5 19965787 19966093 -183119439 + MER46B DNA MER2_type 44 236 0 45 75 0 0 chr5 19967508 19967602 -183117930 + AT_rich Low_complexity Low_complexity 1 94 0 565 207 49 0 chr5 19967977 19968141 -183117391 - L1M4 LINE L1 -3706 2440 2269 3577 268 74 36 chr5 19968151 19969062 -183116470 - L1ME1 LINE L1 -5 6230 5355 3684 142 18 5 chr5 19969062 19969687 -183115845 - L1PB4 LINE L1 -14 6142 5510 3577 268 74 36 chr5 19969687 19971854 -183113678 - L1ME1 LINE L1 -880 5355 3273 2229 150 11 0 chr5 19971854 19972214 -183113318 - MER47A DNA MER2_type -2 364 1 3577 268 74 36 chr5 19972214 19973271 -183112261 - L1ME1 LINE L1 -2962 3273 2258 2241 100 13 10 chr5 19973271 19973570 -183111962 - AluSc SINE Alu -9 300 1 3577 268 74 36 chr5 19973570 19975386 -183110146 - L1ME1 LINE L1 -3977 2258 82 281 249 27 141 chr5 19975651 19975836 -183109696 + MIR SINE MIR 20 183 -79 32 0 0 0 chr5 19975960 19975992 -183109540 + AT_rich Low_complexity Low_complexity 1 32 0 35 24 0 0 chr5 19976021 19976063 -183109469 + AT_rich Low_complexity Low_complexity 1 42 0 3468 240 89 14 chr5 19976635 19977912 -183107620 + L1MD1 LINE L1 19 1502 -5038 1564 193 66 14 chr5 19977912 19978260 -183107272 + MLT2D LTR ERVL 1 366 -48 1627 164 31 65 chr5 19978278 19978386 -183107146 + L1MD1 LINE L1 1528 1638 -4902 994 69 0 0 chr5 19978386 19978517 -183107015 + L1PB1 LINE L1 6020 6150 -1 1627 164 31 65 chr5 19978517 19978854 -183106678 + L1MD1 LINE L1 1638 1958 -4582 * 3254 218 57 32 chr5 19978853 19980651 -183104881 + L1MD1 LINE L1 4654 6539 -97 1297 256 22 14 chr5 19980651 19981022 -183104510 + MLT1A2 LTR MaLR 1 374 0 3254 218 57 32 chr5 19981022 19981120 -183104412 + L1MD1 LINE L1 6539 6633 -3 417 39 0 0 chr5 19981670 19981721 -183103811 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 340 328 90 25 chr5 19982631 19982832 -183102700 - MIR SINE MIR -29 233 20 257 313 10 21 chr5 19983162 19983280 -183102252 + MIR SINE MIR 35 127 -81 314 264 124 35 chr5 19983288 19983546 -183101986 - MLT1J LTR MaLR 0 511 231 1593 152 114 20 chr5 19983721 19984063 -183101469 - THE1C LTR MaLR 0 375 2 283 303 53 53 chr5 19985037 19985189 -183100343 - MIR SINE MIR -32 230 79 21 0 0 0 chr5 19985219 19985240 -183100292 + AT_rich Low_complexity Low_complexity 1 21 0 339 139 158 40 chr5 19986085 19986186 -183099346 + L1MB7 LINE L1 6053 6165 -19 223 320 165 0 chr5 19986963 19987066 -183098466 + L2 LINE L2 3150 3269 -3 318 321 142 5 chr5 19987088 19987300 -183098232 + L2 LINE L2 3002 3242 -71 1746 96 122 11 chr5 19988284 19988554 -183096978 + AluSg1 SINE Alu 1 300 -9 1161 119 0 0 chr5 19988554 19988742 -183096790 + AluSg/x SINE Alu 134 321 0 275 401 89 0 chr5 19989480 19989762 -183095770 + ERVL LTR ERVL 1758 2064 -3700 25 0 0 0 chr5 19990621 19990646 -183094886 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 19992308 19992339 -183093193 + AT_rich Low_complexity Low_complexity 1 31 0 2212 147 0 16 chr5 19992345 19992719 -183092813 - L1PB1 LINE L1 -8 6143 5776 305 192 0 60 chr5 19992762 19992929 -183092603 + (TA)n Simple_repeat Simple_repeat 2 158 0 343 209 22 52 chr5 19992951 19993085 -183092447 + (TATATG)n Simple_repeat Simple_repeat 4 133 0 7208 177 8 7 chr5 19993102 19995178 -183090354 - L1PB1 LINE L1 -371 5780 3706 1679 228 5 16 chr5 19995437 19995815 -183089717 + MLT1A2 LTR MaLR 1 374 0 681 255 205 11 chr5 19995819 19996209 -183089323 + MLT1C LTR MaLR 1 466 -1 181 280 20 20 chr5 19996456 19996506 -183089026 + L2 LINE L2 3223 3272 0 244 255 0 0 chr5 19996700 19996747 -183088785 + polypurine Low_complexity Low_complexity 4 50 0 36 40 0 0 chr5 19998098 19998148 -183087384 + AT_rich Low_complexity Low_complexity 1 50 0 981 126 82 6 chr5 19998253 19998436 -183087096 + THE1C LTR MaLR 179 375 0 7742 141 113 8 chr5 19998436 19999867 -183085665 + THE1C-int LTR MaLR 1 1580 0 2035 144 65 8 chr5 19999867 20000222 -183085310 + THE1C LTR MaLR 1 375 0 2043 146 0 3 chr5 20000944 20001238 -183084294 + AluSx SINE Alu 1 293 -19 1573 200 35 9 chr5 20002841 20003181 -183082351 - MLT1A2 LTR MaLR -20 354 6 544 257 74 29 chr5 20003185 20003360 -183082172 + MLT1G LTR MaLR 108 290 -300 932 18 9 0 chr5 20103926 20104035 -182981497 + L1HS LINE L1 6044 6153 -2 23 54 0 0 chr5 20104035 20104072 -182981460 + AT_rich Low_complexity Low_complexity 1 37 0 43485 30 21 2 chr5 20104754 20110789 -182974743 + L1HS LINE L1 2 6155 0 22 0 0 0 chr5 20110847 20110869 -182974663 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 20112562 20112586 -182972946 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 20113525 20113546 -182971986 + (TTTAA)n Simple_repeat Simple_repeat 5 25 0 732 104 0 9 chr5 20113551 20113657 -182971875 - L1MA5A LINE L1 -5 6292 6188 2145 177 11 16 chr5 20115805 20116172 -182969360 + MLT1A1 LTR MaLR 1 365 0 2367 69 3 3 chr5 20117938 20118227 -182967305 + AluSp SINE Alu 1 289 -24 207 261 36 9 chr5 20118227 20118338 -182967194 + (TA)n Simple_repeat Simple_repeat 1 114 0 318 305 23 38 chr5 20119857 20119988 -182965544 + L2 LINE L2 3185 3313 0 1889 157 4 0 chr5 20120172 20120453 -182965079 - AluSx SINE Alu -30 282 1 1886 108 0 4 chr5 20121026 20121276 -182964256 + AluSx SINE Alu 48 296 -16 2492 58 3 10 chr5 20121362 20121671 -182963861 + AluY SINE Alu 1 307 -4 317 276 79 8 chr5 20121986 20122113 -182963419 - L1ME4a LINE L1 -11 6110 5975 467 121 0 0 chr5 20122122 20122188 -182963344 + MADE1 DNA Mariner 15 80 0 203 0 0 36 chr5 20123008 20123036 -182962496 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1677 111 103 0 chr5 20123038 20123299 -182962233 - AluSp SINE Alu -25 288 1 425 250 72 72 chr5 20124062 20124169 -182961363 + MIR SINE MIR 9 118 -144 2542 50 3 0 chr5 20124169 20124469 -182961063 - AluY SINE Alu -10 301 1 425 250 72 72 chr5 20124469 20124541 -182960991 + MIR SINE MIR 117 188 -74 228 213 0 0 chr5 20124638 20124685 -182960847 + L2 LINE L2 3265 3311 -2 513 292 167 33 chr5 20124757 20125147 -182960385 + L2 LINE L2 2547 2998 -315 1057 230 164 39 chr5 20125186 20125594 -182959938 + LTR33 LTR ERVL 58 516 -5 736 249 106 26 chr5 20125595 20125868 -182959664 + L2 LINE L2 3019 3313 0 2116 144 0 45 chr5 20126556 20126764 -182958768 - MER1B DNA MER1_type -2373 337 150 2156 92 44 0 chr5 20126764 20127059 -182958473 + AluSp SINE Alu 1 308 -5 2116 144 0 45 chr5 20127059 20127203 -182958329 - MER1B DNA MER1_type -2560 150 1 712 238 23 23 chr5 20127565 20127737 -182957795 - MER5B DNA MER1_type -6 172 1 2120 106 0 4 chr5 20128788 20129108 -182956424 + AluSx SINE Alu 13 331 0 263 188 16 31 chr5 20131011 20131075 -182954457 - MER4-int LTR ERV1 -5433 1165 1103 1648 160 16 39 chr5 20131284 20131590 -182953942 + AluJb SINE Alu 1 299 -13 1498 289 66 38 chr5 20131784 20132361 -182953171 + MLT1E LTR MaLR 1 593 0 1007 232 79 92 chr5 20132689 20132821 -182952711 + MLT1B LTR MaLR 1 133 -257 1820 79 0 0 chr5 20132821 20133048 -182952484 + AluY SINE Alu 83 309 -2 1007 232 79 92 chr5 20133048 20133294 -182952238 + MLT1B LTR MaLR 133 374 -16 3034 129 9 5 chr5 20135065 20135491 -182950041 + MSTA LTR MaLR 1 428 0 4676 82 28 3 chr5 20135637 20136256 -182949276 + L1PB1 LINE L1 5515 6148 -3 24 0 0 0 chr5 20136260 20136284 -182949248 + AT_rich Low_complexity Low_complexity 1 24 0 322 240 44 115 chr5 20136309 20136492 -182949040 + MIR SINE MIR 90 259 -3 240 0 49 24 chr5 20136565 20136606 -182948926 + (TA)n Simple_repeat Simple_repeat 1 42 0 631 194 304 28 chr5 20136614 20136867 -182948665 - MER5C DNA MER1_type -1 323 1 327 254 55 65 chr5 20137198 20137399 -182948133 + LTR67 LTR ERVL 359 557 0 344 246 71 48 chr5 20138258 20138384 -182947148 - MER5B DNA MER1_type -49 129 1 180 333 0 0 chr5 20140204 20140255 -182945277 + MIR SINE MIR 66 116 -92 30568 100 19 12 chr5 20140893 20146609 -182938923 - L1PA7 LINE L1 0 6469 691 1764 187 0 0 chr5 20147193 20147477 -182938055 - AluJb SINE Alu -28 284 1 258 229 47 153 chr5 20147635 20147805 -182937727 - L2 LINE L2 -48 3265 3114 720 230 42 21 chr5 20147961 20148152 -182937380 + MLT1E LTR MaLR 1 195 -398 622 217 7 35 chr5 20148258 20148401 -182937131 + MLT1B LTR MaLR 423 561 -6 448 239 20 70 chr5 20148418 20148619 -182936913 - L2 LINE L2 -172 3141 2951 205 266 138 27 chr5 20148654 20148842 -182936690 - MIR SINE MIR -30 232 24 1975 251 65 45 chr5 20148855 20149180 -182936352 - MLT1E2 LTR MaLR -4 622 278 2433 86 0 0 chr5 20149180 20149481 -182936051 - AluSc SINE Alu -8 301 1 1975 251 65 45 chr5 20149481 20149753 -182935779 - MLT1E2 LTR MaLR -348 278 13 237 338 86 7 chr5 20149920 20150071 -182935461 - L2 LINE L2 -218 3054 2892 2971 87 3 8 chr5 20150391 20150769 -182934763 + L1PA8A LINE L1 5753 6128 -3 233 346 0 12 chr5 20151578 20151659 -182933873 + GA-rich Low_complexity Low_complexity 6 85 0 422 333 22 30 chr5 20152231 20152462 -182933070 + MLT1K LTR MaLR 350 578 -10 387 191 63 35 chr5 20152834 20152953 -182932579 - MSTB1 LTR MaLR 0 432 246 465 165 23 11 chr5 20153001 20153106 -182932426 - MSTB1 LTR MaLR 0 432 346 286 27 27 0 chr5 20153170 20153207 -182932325 - MSTB1 LTR MaLR 0 432 395 1591 165 32 51 chr5 20153373 20153726 -182931806 - MSTB1 LTR MaLR -72 324 4 333 315 135 17 chr5 20154692 20154861 -182930671 + MIR SINE MIR 61 253 -9 2356 138 30 25 chr5 20154861 20155223 -182930309 - THE1B LTR MaLR 0 364 1 204 227 0 0 chr5 20155323 20155367 -182930165 + L2 LINE L2 3265 3308 -5 516 345 21 21 chr5 20156319 20156513 -182929019 + MIR3 SINE MIR 6 199 -9 403 305 47 8 chr5 20157339 20157467 -182928065 + MIR SINE MIR 12 144 -118 226 162 0 0 chr5 20157468 20157505 -182928027 - MER20 DNA MER1_type 0 219 183 2315 141 8 3 chr5 20157508 20157870 -182927662 + THE1B LTR MaLR 1 364 0 521 207 43 0 chr5 20157882 20157998 -182927534 - MER20 DNA MER1_type -98 121 1 224 107 89 0 chr5 20159052 20159108 -182926424 + (TA)n Simple_repeat Simple_repeat 1 61 0 858 202 69 28 chr5 20159790 20160008 -182925524 + MIR SINE MIR 3 229 -33 254 258 90 0 chr5 20160091 20160180 -182925352 + MIR3 SINE MIR 84 180 -28 355 320 121 40 chr5 20160219 20160561 -182924971 + L1ME4a LINE L1 5539 5935 -186 198 0 0 0 chr5 20160561 20160583 -182924949 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 355 320 121 40 chr5 20160583 20160737 -182924795 + L1ME4a LINE L1 5935 6075 -46 1316 102 5 32 chr5 20160738 20160954 -182924578 - L1PA13 LINE L1 -1 6162 5953 2175 98 9 15 chr5 20160954 20161290 -182924242 + THE1A LTR MaLR 22 355 0 563 309 47 21 chr5 20161360 20161593 -182923939 + MIR SINE MIR 18 256 -6 652 282 86 21 chr5 20164117 20164351 -182921181 + MIR SINE MIR 2 250 -12 333 0 0 0 chr5 20165454 20165491 -182920041 + (TG)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr5 20165659 20165684 -182919848 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 20167162 20167187 -182918345 + AT_rich Low_complexity Low_complexity 1 25 0 520 275 105 16 chr5 20167248 20167452 -182918080 + MIR SINE MIR 3 219 -43 2257 135 34 8 chr5 20167588 20167943 -182917589 - THE1B LTR MaLR 0 364 1 2261 107 0 0 chr5 20168625 20168923 -182916609 + AluSg SINE Alu 1 298 -12 1887 224 75 47 chr5 20169194 20169788 -182915744 - MLT1E1 LTR MaLR -12 642 28 2773 85 11 11 chr5 20169788 20170163 -182915369 + THE1C LTR MaLR 1 375 0 1887 224 75 47 chr5 20170163 20170192 -182915340 - MLT1E1 LTR MaLR -626 28 1 405 332 129 11 chr5 20170232 20170518 -182915014 - L1MC/D LINE L1 -2457 5585 5266 927 233 12 27 chr5 20170640 20170898 -182914634 + MER93b LTR ERV1 108 361 -12 2487 60 0 3 chr5 20171315 20171615 -182913917 - AluY SINE Alu -12 299 1 245 203 8 55 chr5 20173358 20173486 -182912046 + (TA)n Simple_repeat Simple_repeat 1 122 0 337 298 142 19 chr5 20173842 20174047 -182911485 - L2 LINE L2 -1 3312 3083 1905 152 45 22 chr5 20174376 20174732 -182910800 - THE1B LTR MaLR 0 364 1 6002 121 16 3 chr5 20174732 20175658 -182909874 - THE1B-int LTR MaLR 0 1580 643 550 274 83 94 chr5 20175714 20176437 -182909095 + L1M4 LINE L1 3782 4492 -1654 2306 88 20 0 chr5 20176437 20176732 -182908800 - AluSc SINE Alu -8 301 1 550 274 83 94 chr5 20176732 20177066 -182908466 + L1M4 LINE L1 4492 4828 -1318 206 256 13 0 chr5 20177490 20177568 -182907964 + GA-rich Low_complexity Low_complexity 1 79 0 318 299 57 32 chr5 20177801 20178272 -182907260 + L1M4 LINE L1 4878 5360 -786 1783 166 47 36 chr5 20178771 20179132 -182906400 + MLT1A1 LTR MaLR 1 365 0 1089 298 55 70 chr5 20180597 20181111 -182904421 + L2 LINE L2 2806 3311 -2 246 259 37 49 chr5 20181149 20181230 -182904302 + L2 LINE L2 3192 3271 -42 218 281 151 60 chr5 20181594 20181779 -182903753 + MIR SINE MIR 13 214 -48 256 219 37 24 chr5 20182533 20182615 -182902917 - MIR SINE MIR -128 134 52 695 236 37 11 chr5 20182788 20183185 -182902347 - LTR37B LTR ERV1 0 468 6 1677 159 49 62 chr5 20183813 20184127 -182901405 + MLT1A1 LTR MaLR 1 311 -54 2383 125 28 17 chr5 20184127 20184487 -182901045 - THE1B LTR MaLR 0 364 1 1677 159 49 62 chr5 20184487 20184542 -182900990 + MLT1A1 LTR MaLR 311 365 0 339 197 94 158 chr5 20186708 20186779 -182898753 - MER69 DNA AcHobo -1036 190 116 360 0 0 0 chr5 20186779 20186819 -182898713 + (TG)n Simple_repeat Simple_repeat 2 41 0 2196 109 0 0 chr5 20186819 20187103 -182898429 - AluSx SINE Alu -28 284 1 339 197 94 158 chr5 20187103 20187233 -182898299 - MER69 DNA AcHobo -1108 118 1 180 0 0 0 chr5 20188034 20188054 -182897478 + (CCA)n Simple_repeat Simple_repeat 3 22 0 652 249 22 5 chr5 20188856 20189041 -182896491 - MER53 DNA DNA -1 188 1 336 239 123 71 chr5 20189058 20189213 -182896319 - MIR SINE MIR 0 262 100 1187 236 121 11 chr5 20189523 20189879 -182895653 + MSTD LTR MaLR 2 396 0 181 400 19 0 chr5 20190191 20190296 -182895236 - L2 LINE L2 -221 3051 2945 2130 133 0 0 chr5 20190586 20190888 -182894644 + AluSx SINE Alu 1 302 -10 180 359 127 21 chr5 20191341 20191483 -182894049 + MIR3 SINE MIR 15 171 -37 235 331 129 8 chr5 20192348 20192472 -182893060 + MIR3 SINE MIR 62 200 -8 2441 62 0 56 chr5 20192985 20193309 -182892223 - AluSx SINE Alu -6 306 1 261 326 170 36 chr5 20193379 20193796 -182891736 + L3 LINE CR1 1064 1536 -41 227 343 0 0 chr5 20194245 20194315 -182891217 + MIR SINE MIR 42 111 -151 * 780 203 39 44 chr5 20194311 20194493 -182891039 + MER5A DNA MER1_type 8 188 -1 373 233 167 17 chr5 20194493 20194612 -182890920 + MIR SINE MIR 102 238 -24 2028 126 0 38 chr5 20194917 20195234 -182890298 - AluSc SINE Alu -4 305 1 365 288 23 23 chr5 20195752 20195884 -182889648 - MIR SINE MIR -122 140 9 33 43 0 0 chr5 20196018 20196065 -182889467 + AT_rich Low_complexity Low_complexity 1 47 0 205 299 75 59 chr5 20196174 20196361 -182889171 - L2 LINE L2 -8 3264 3075 194 163 70 23 chr5 20196358 20196401 -182889131 + MER5B DNA MER1_type 102 146 -32 * 585 206 7 35 chr5 20198089 20198230 -182887302 + MER58B DNA MER1_type 204 340 -1 369 0 0 0 chr5 20198560 20198601 -182886931 + (CA)n Simple_repeat Simple_repeat 1 41 0 248 188 16 0 chr5 20199148 20199212 -182886320 + (CA)n Simple_repeat Simple_repeat 2 66 0 2399 137 6 6 chr5 20199438 20199802 -182885730 - THE1B LTR MaLR 0 364 1 266 308 125 10 chr5 20200161 20200265 -182885267 - MIR SINE MIR -63 145 30 2925 123 32 20 chr5 20200652 20201018 -182884514 - L1PB3 LINE L1 0 6154 5779 267 103 0 0 chr5 20201018 20201057 -182884475 + (TA)n Simple_repeat Simple_repeat 2 40 0 2925 123 32 20 chr5 20201057 20201187 -182884345 - L1PB3 LINE L1 -375 5779 5652 255 240 260 0 chr5 20202540 20202636 -182882896 - MER103 DNA DNA -44 122 2 6918 62 3 3 chr5 20202717 20204102 -182881430 - L1PA7 LINE L1 0 6154 4768 4802 75 3 0 chr5 20204102 20204780 -182880752 + L1PA7 LINE L1 4080 4759 -1387 6311 79 5 5 chr5 20204789 20205678 -182879854 - L1PA8 LINE L1 -6 6166 5278 2122 149 21 21 chr5 20205688 20206076 -182879456 + MLT1B LTR MaLR 1 388 -2 282 327 55 35 chr5 20206395 20206594 -182878938 - L2 LINE L2 -2 3311 3109 2224 119 0 0 chr5 20206729 20207023 -182878509 - AluSq SINE Alu -16 297 4 246 277 34 67 chr5 20207744 20207863 -182877669 - MIR SINE MIR 0 262 148 185 265 0 20 chr5 20207920 20207969 -182877563 - MIR SINE MIR -201 61 14 225 290 16 0 chr5 20208513 20208575 -182876957 - L2 LINE L2 -24 3248 3186 2044 128 33 3 chr5 20210063 20210367 -182875165 + AluSq SINE Alu 1 313 0 274 299 55 8 chr5 20210636 20210763 -182874769 - MER94 DNA DNA -1 133 1 243 327 37 9 chr5 20211183 20211290 -182874242 + MIR3 SINE MIR 98 207 -1 2033 164 5 44 chr5 20212038 20212386 -182873146 + MLT1B LTR MaLR 1 334 -56 2290 135 12 24 chr5 20212386 20212727 -182872805 - MER1B DNA MER1_type 0 337 1 2033 164 5 44 chr5 20212727 20212762 -182872770 + MLT1B LTR MaLR 334 369 -21 209 33 33 0 chr5 20212804 20212834 -182872698 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1615 191 0 3 chr5 20212836 20213119 -182872413 - AluJo SINE Alu -30 282 1 269 341 0 11 chr5 20213693 20213784 -182871748 + GA-rich Low_complexity Low_complexity 2 91 0 645 307 115 48 chr5 20214166 20214352 -182871180 - L2 LINE L2 -10 3303 3131 2201 118 3 0 chr5 20214352 20214648 -182870884 + AluSx SINE Alu 1 297 -15 645 307 115 48 chr5 20214648 20215274 -182870258 - L2 LINE L2 -182 3131 2440 420 97 0 0 chr5 20215608 20215670 -182869862 + (CA)n Simple_repeat Simple_repeat 2 63 0 1840 214 36 13 chr5 20216033 20216421 -182869111 + MLT2C1 LTR ERVL 1 397 0 289 307 143 7 chr5 20216653 20216793 -182868739 + MIR SINE MIR 104 262 0 2291 98 3 3 chr5 20217643 20217948 -182867584 + AluSp SINE Alu 1 305 -8 206 303 90 11 chr5 20218151 20218240 -182867292 + L2 LINE L2 3138 3233 -39 247 359 53 23 chr5 20219710 20219841 -182865691 + MER91A DNA MER1_type 26 160 -36 213 280 0 0 chr5 20219847 20219897 -182865635 + MER91A DNA MER1_type 137 186 -10 255 318 23 8 chr5 20219956 20220088 -182865444 - MER94 DNA DNA 0 134 1 1154 214 10 0 chr5 20220821 20221027 -182864505 - MER58A DNA MER1_type -15 209 2 189 0 0 0 chr5 20222339 20222360 -182863172 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 296 283 71 0 chr5 20223484 20223583 -182861949 + L2 LINE L2 3207 3312 -1 1045 233 97 44 chr5 20223714 20224126 -182861406 + MLT1C LTR MaLR 34 467 0 267 247 27 130 chr5 20224743 20224889 -182860643 + Tigger8 DNA MER2_type 527 657 -9 420 271 30 98 chr5 20225357 20225560 -182859972 + LTR33 LTR ERVL 13 201 -320 382 243 179 7 chr5 20225654 20225794 -182859738 + LTR33 LTR ERVL 328 491 -30 230 336 65 43 chr5 20226069 20226301 -182859231 - MIR SINE MIR -5 257 21 490 284 110 5 chr5 20226810 20227028 -182858504 - MIR SINE MIR 0 262 22 297 304 52 52 chr5 20227126 20227320 -182858212 + L3 LINE CR1 771 964 -613 200 270 16 32 chr5 20227888 20227951 -182857581 + L3 LINE CR1 1220 1281 -296 2218 103 10 0 chr5 20228155 20228457 -182857075 + AluY SINE Alu 1 305 -6 998 124 65 0 chr5 20228458 20228611 -182856921 + AluSc SINE Alu 132 294 -15 1783 213 63 16 chr5 20229012 20229453 -182856079 + MLT1C LTR MaLR 6 467 0 224 322 123 20 chr5 20229843 20229989 -182855543 + L2 LINE L2 2944 3104 -209 1131 246 146 25 chr5 20230069 20230500 -182855032 - MLT1D LTR MaLR -2 503 21 28 29 0 0 chr5 20230579 20230614 -182854918 + AT_rich Low_complexity Low_complexity 1 35 0 195 162 0 0 chr5 20231009 20231046 -182854486 + GA-rich Low_complexity Low_complexity 2 38 0 2213 163 78 8 chr5 20232426 20232824 -182852708 - MSTB LTR MaLR 0 426 1 209 290 129 16 chr5 20232995 20233119 -182852413 - MIR3 SINE MIR -3 205 68 1202 304 198 49 chr5 20233328 20234697 -182850835 + L2 LINE L2 87 1707 -1607 6254 66 8 1 chr5 20234697 20235459 -182850073 + L1PA7 LINE L1 5373 6139 -15 1202 304 198 49 chr5 20235459 20235613 -182849919 + L2 LINE L2 1707 1837 -1477 507 254 115 90 chr5 20235668 20236199 -182849333 - HAL1 LINE L1 -100 2407 1864 1839 151 37 14 chr5 20237822 20238172 -182847360 - L1MA4 LINE L1 -7 6293 5936 334 214 10 61 chr5 20238802 20238900 -182846632 - MER5B DNA MER1_type -82 96 4 183 318 114 0 chr5 20238979 20239067 -182846465 - L2 LINE L2 -1900 1414 1317 252 0 0 0 chr5 20239558 20239586 -182845946 + (T)n Simple_repeat Simple_repeat 1 28 0 395 327 47 0 chr5 20240080 20240230 -182845302 + MIR SINE MIR 50 206 -56 22 56 0 0 chr5 20241204 20241240 -182844292 + AT_rich Low_complexity Low_complexity 1 36 0 885 228 73 23 chr5 20242898 20243321 -182842211 + MLT1D LTR MaLR 22 503 -2 1565 160 49 45 chr5 20243657 20243945 -182841587 - AluJo SINE Alu -23 289 1 21 0 0 0 chr5 20243954 20243975 -182841557 + AT_rich Low_complexity Low_complexity 1 21 0 1467 199 10 23 chr5 20244108 20244409 -182841123 + AluJo SINE Alu 1 297 -15 375 261 164 29 chr5 20244594 20244801 -182840731 - MIR SINE MIR -8 254 20 2143 111 27 10 chr5 20245238 20245535 -182839997 + AluSq SINE Alu 3 304 -9 193 225 25 0 chr5 20245690 20245730 -182839802 - MIR SINE MIR -137 71 31 219 333 0 35 chr5 20246118 20246205 -182839327 + MIR SINE MIR 30 113 -95 371 302 107 18 chr5 20246445 20246642 -182838890 + MIR SINE MIR 3 215 -47 297 341 9 67 chr5 20246795 20247018 -182838514 - MLT1J LTR MaLR -193 318 109 899 285 10 24 chr5 20247352 20247640 -182837892 - L1MC4a LINE L1 0 7808 7525 2300 106 0 0 chr5 20248755 20249057 -182836475 - AluY SINE Alu -9 302 1 1709 142 11 4 chr5 20250046 20250314 -182835218 + L1PA11 LINE L1 5905 6174 0 294 29 0 0 chr5 20251228 20251263 -182834269 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 216 0 0 0 chr5 20251264 20251288 -182834244 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 252 321 28 9 chr5 20251469 20251575 -182833957 - L2 LINE L2 -948 2366 2259 1736 200 26 29 chr5 20252074 20252459 -182833073 + MER58D DNA MER1_type 3 386 0 526 313 32 36 chr5 20252497 20252731 -182832801 - MIR SINE MIR -26 236 6 474 165 35 0 chr5 20253142 20253227 -182832305 + MLT2B3 LTR ERVL 1 88 -466 1191 226 19 70 chr5 20253234 20253548 -182831984 + MLT2B3 LTR ERVL 257 554 0 247 228 94 134 chr5 20254020 20254169 -182831363 - MIR SINE MIR -118 144 2 435 234 6 126 chr5 20254623 20254790 -182830742 - MIR SINE MIR -68 194 48 1611 228 129 9 chr5 20254940 20255366 -182830166 + MLT1E LTR MaLR 111 587 -6 1591 185 27 10 chr5 20255466 20255758 -182829774 + AluJb SINE Alu 1 297 -15 180 245 0 20 chr5 20257258 20257307 -182828225 + MIR3 SINE MIR 157 204 -4 407 213 0 25 chr5 20257484 20257564 -182827968 + L2 LINE L2 3189 3266 -47 180 77 0 0 chr5 20257585 20257611 -182827921 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr5 20257727 20257749 -182827783 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 20258338 20258367 -182827165 + AT_rich Low_complexity Low_complexity 1 29 0 245 222 0 0 chr5 20258808 20258853 -182826679 - MER20 DNA MER1_type 0 219 175 651 156 78 0 chr5 20258861 20258989 -182826543 + L1PA16 LINE L1 6029 6166 0 207 100 0 0 chr5 20261917 20261947 -182823585 + (CA)n Simple_repeat Simple_repeat 1 30 0 388 354 15 56 chr5 20263120 20263173 -182822359 - MIR3 SINE MIR -4 204 150 512 212 258 7 chr5 20263173 20263324 -182822208 + MER5A DNA MER1_type 1 189 0 388 354 15 56 chr5 20263324 20263468 -182822064 - MIR3 SINE MIR -58 150 15 180 0 0 0 chr5 20264816 20264836 -182820696 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 661 74 279 0 chr5 20265058 20265180 -182820352 - L1PA7 LINE L1 0 6154 5999 283 302 113 9 chr5 20267156 20267262 -182818270 + L2 LINE L2 3196 3312 -1 372 303 59 17 chr5 20267319 20267438 -182818094 + MER91A DNA MER1_type 20 143 -53 2427 61 0 3 chr5 20267698 20267994 -182817538 - AluY SINE Alu -16 295 1 2358 108 0 0 chr5 20268070 20268377 -182817155 - AluSx SINE Alu -5 307 1 1087 204 195 0 chr5 20268411 20268642 -182816890 + AluJo SINE Alu 32 307 -5 2062 122 59 6 chr5 20268650 20268987 -182816545 - THE1B LTR MaLR 0 364 10 1077 204 23 9 chr5 20269057 20269273 -182816259 - MER20 DNA MER1_type 0 219 1 658 289 29 49 chr5 20370478 20370724 -182714808 - MIR SINE MIR -13 249 9 289 342 9 18 chr5 20374053 20374164 -182711368 - L2 LINE L2 -23 3290 3181 329 332 57 16 chr5 20374467 20374660 -182710872 - L2 LINE L2 -490 2824 2624 193 326 20 31 chr5 20374661 20374759 -182710773 + MIR SINE MIR 164 260 -2 271 295 213 21 chr5 20375980 20376397 -182709135 - L2 LINE L2 -23 3290 2743 219 36 0 0 chr5 20377765 20377793 -182707739 + (TG)n Simple_repeat Simple_repeat 2 29 0 352 288 83 49 chr5 20378214 20378419 -182707113 + L1 LINE L1 3560 3771 -2375 215 163 82 0 chr5 20378601 20378650 -182706882 - MIR SINE MIR -1 261 209 303 242 121 10 chr5 20378934 20379033 -182706499 - L2 LINE L2 -14 3299 3190 216 0 0 0 chr5 20379439 20379463 -182706069 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2118 76 0 134 chr5 20380363 20380720 -182704812 - AluSp SINE Alu -4 309 1 328 312 71 24 chr5 20381725 20381895 -182703637 + MIR SINE MIR 85 262 0 505 246 8 25 chr5 20382766 20382888 -182702644 + L1MC3 LINE L1 7131 7250 -535 865 185 109 112 chr5 20382889 20383202 -182702330 + MLT1A1 LTR MaLR 1 312 -53 297 294 0 0 chr5 20383354 20383439 -182702093 - L1MC3 LINE L1 -1214 6571 6487 261 163 0 0 chr5 20383442 20383483 -182702049 - MLT2B1 LTR ERVL 0 520 477 282 116 0 0 chr5 20383483 20383526 -182702006 + (TG)n Simple_repeat Simple_repeat 2 44 0 539 177 0 0 chr5 20383661 20383740 -182701792 - Tigger5 DNA MER2_type -2244 79 1 234 0 0 0 chr5 20383749 20383775 -182701757 + (TG)n Simple_repeat Simple_repeat 2 27 0 1291 232 37 92 chr5 20383775 20384263 -182701269 - MLT2B1 LTR ERVL -59 461 1 337 285 66 40 chr5 20384318 20384469 -182701063 + L2 LINE L2 3158 3312 -1 198 0 0 0 chr5 20387687 20387709 -182697823 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1409 13 0 0 chr5 20387709 20387860 -182697672 - L1PA2 LINE L1 -13 6142 5992 1141 227 106 11 chr5 20388039 20388321 -182697211 + MER58B DNA MER1_type 32 340 -1 581 331 6 0 chr5 20390369 20390541 -182694991 - MIR SINE MIR -6 256 84 966 260 146 31 chr5 20391450 20391896 -182693636 + MLT1G1 LTR MaLR 90 586 -9 851 254 37 18 chr5 20392031 20392248 -182693284 + MIR SINE MIR 8 228 -34 229 188 14 29 chr5 20395665 20395734 -182689798 + (CTG)n Simple_repeat Simple_repeat 3 70 0 25 51 0 0 chr5 20395760 20395799 -182689733 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr5 20396026 20396054 -182689478 + GC_rich Low_complexity Low_complexity 1 28 0 210 37 0 0 chr5 20396059 20396086 -182689446 + (CGG)n Simple_repeat Simple_repeat 1 27 0 209 277 0 50 chr5 20396224 20396325 -182689207 + G-rich Low_complexity Low_complexity 4 99 0 218 310 0 0 chr5 20396428 20396515 -182689017 + G-rich Low_complexity Low_complexity 1 87 0 296 297 56 146 chr5 20398507 20398776 -182686756 - L2 LINE L2 -2 3270 3065 2080 116 7 7 chr5 20398776 20399079 -182686453 - AluSc SINE Alu -6 303 1 296 297 56 146 chr5 20399079 20399310 -182686222 - L2 LINE L2 -207 3065 2815 186 280 152 45 chr5 20399864 20400128 -182685404 - L2 LINE L2 -1207 2107 1816 2218 113 0 0 chr5 20400171 20400463 -182685069 + AluSx SINE Alu 1 292 -20 2304 194 24 72 chr5 20400541 20400835 -182684697 - MER21B LTR ERV1 -3 860 553 1730 145 19 0 chr5 20400835 20401097 -182684435 + AluJb SINE Alu 2 268 -44 2304 194 24 72 chr5 20401097 20401112 -182684420 - MER21B LTR ERV1 -310 553 539 255 31 0 0 chr5 20401112 20401144 -182684388 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2304 194 24 72 chr5 20401144 20401386 -182684146 - MER21B LTR ERV1 -324 539 335 6551 93 2 0 chr5 20401386 20402228 -182683304 + THE1B-int LTR MaLR 737 1580 0 2272 141 30 25 chr5 20402228 20402590 -182682942 + THE1B LTR MaLR 1 364 0 261 337 0 12 chr5 20403081 20403167 -182682365 + L2 LINE L2 3186 3270 -2 1573 221 22 14 chr5 20403309 20403667 -182681865 - MLT1H1 LTR MaLR 0 555 195 663 224 6 60 chr5 20403667 20403850 -182681682 + MER20 DNA MER1_type 3 175 -44 277 215 91 135 chr5 20403866 20404116 -182681416 - MLT1H1 LTR MaLR -300 249 1 453 276 32 19 chr5 20404748 20404904 -182680628 + Charlie8 DNA MER1_type 62 219 -2198 276 111 0 0 chr5 20405009 20405054 -182680478 + (TAA)n Simple_repeat Simple_repeat 2 46 0 383 297 77 46 chr5 20405295 20405490 -182680042 + MLT1H LTR MaLR 119 319 -230 353 244 8 32 chr5 20405622 20405745 -182679787 - L1MC5 LINE L1 -36 7925 7806 1778 166 7 0 chr5 20406260 20406550 -182678982 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 20406622 20407027 -182678505 - L1MC/D LINE L1 -2000 5808 5379 292 175 25 12 chr5 20407027 20407107 -182678425 + (TA)n Simple_repeat Simple_repeat 1 81 0 198 71 0 0 chr5 20407108 20407136 -182678396 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 20407140 20407302 -182678230 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 20407406 20407890 -182677642 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 20408803 20408949 -182676583 - LTR67 LTR ERVL -5 552 410 1349 260 91 29 chr5 20409241 20409725 -182675807 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 20409806 20409839 -182675693 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 20410475 20410548 -182674984 - L1M4 LINE L1 -3172 2974 2898 461 276 97 21 chr5 20410781 20410926 -182674606 - MIR SINE MIR -70 192 37 2026 107 48 46 chr5 20411633 20412006 -182673526 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 20412098 20412147 -182673385 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 20412236 20412291 -182673241 + AT_rich Low_complexity Low_complexity 1 55 0 189 222 22 0 chr5 20413657 20413702 -182671830 + L3 LINE CR1 1516 1561 -16 627 269 55 38 chr5 20414350 20414588 -182670944 - MIR SINE MIR -6 256 15 232 232 0 0 chr5 20415863 20415919 -182669613 + (CAGAGA)n Simple_repeat Simple_repeat 2 57 0 571 241 11 0 chr5 20416447 20416608 -182668924 + L1ME3 LINE L1 5460 5625 -537 447 290 0 26 chr5 20416625 20416780 -182668752 + MLT1H LTR MaLR 22 172 -377 1257 264 49 3 chr5 20416902 20417269 -182668263 + L1ME3 LINE L1 5778 6161 -1 438 282 26 48 chr5 20418282 20418509 -182667023 - L1ME LINE L1 -298 5823 5602 461 92 13 0 chr5 20418701 20418777 -182666755 + (TG)n Simple_repeat Simple_repeat 2 78 0 362 335 85 6 chr5 20419034 20419284 -182666248 - L1ME LINE L1 -1973 4173 3889 958 242 68 84 chr5 20420743 20421256 -182664276 + MLT1J LTR MaLR 5 509 -2 310 280 84 38 chr5 20421331 20421570 -182663962 + L1MC/D LINE L1 2583 2832 -3314 398 277 73 55 chr5 20421753 20422027 -182663505 + L1MC/D LINE L1 5317 5595 -2213 28 0 0 0 chr5 20422509 20422537 -182662995 + AT_rich Low_complexity Low_complexity 1 28 0 197 273 55 0 chr5 20422831 20422886 -182662646 + MIR SINE MIR 205 262 0 1853 158 55 0 chr5 20423736 20424064 -182661468 - MER7A DNA MER2_type -2 344 1 4928 177 83 1 chr5 20424157 20425782 -182659750 + L1MA4 LINE L1 4349 6120 -180 1546 72 36 18 chr5 20425784 20426006 -182659526 - L1PA10 LINE L1 -1 6167 5942 984 164 11 5 chr5 20426006 20426194 -182659338 + L1MA8 LINE L1 6096 6285 -6 268 207 0 0 chr5 20426209 20426267 -182659265 - Charlie1 DNA MER1_type -524 2237 2180 21 57 0 0 chr5 20426267 20426302 -182659230 + AT_rich Low_complexity Low_complexity 1 35 0 33 43 0 0 chr5 20427301 20427348 -182658184 + AT_rich Low_complexity Low_complexity 1 47 0 361 153 86 0 chr5 20427348 20427511 -182658021 + (TA)n Simple_repeat Simple_repeat 1 177 0 23 33 0 0 chr5 20427511 20427541 -182657991 + AT_rich Low_complexity Low_complexity 1 30 0 1238 56 0 12 chr5 20428125 20428287 -182657245 - L1PA5 LINE L1 -6 6148 5989 21 0 0 0 chr5 20429212 20429233 -182656299 + AT_rich Low_complexity Low_complexity 1 21 0 434 284 101 51 chr5 20429595 20429852 -182655680 + L2 LINE L2 3044 3313 0 268 308 117 25 chr5 20430006 20430126 -182655406 - MIR SINE MIR -130 132 2 582 220 24 6 chr5 20430630 20430798 -182654734 + L1M4 LINE L1 2213 2383 -3763 732 198 54 164 chr5 20430798 20431243 -182654289 + MLT1A1 LTR MaLR 1 396 0 831 216 82 4 chr5 20431243 20431488 -182654044 + L1M4 LINE L1 2379 2642 -3504 724 223 53 49 chr5 20431558 20431805 -182653727 - MER46C DNA MER2_type -5 333 86 519 315 156 8 chr5 20431827 20432303 -182653229 + L2 LINE L2 2508 3065 -248 2148 178 160 140 chr5 20432346 20432905 -182652627 - L1MC3 LINE L1 -17 7768 7222 253 219 115 62 chr5 20432905 20433001 -182652531 - MLT1F1 LTR MaLR -431 136 36 2148 178 160 140 chr5 20433001 20433015 -182652517 - L1MC3 LINE L1 -563 7222 7210 284 56 0 0 chr5 20433015 20433051 -182652481 - tRNA-Gly-GGG tRNA tRNA -38 36 1 2148 178 160 140 chr5 20433051 20433519 -182652013 - L1MC3 LINE L1 -575 7210 6572 226 287 9 9 chr5 20433634 20433742 -182651790 + (TA)n Simple_repeat Simple_repeat 1 108 0 930 276 91 52 chr5 20434758 20435219 -182650313 + L2 LINE L2 2421 2899 -415 2158 107 0 35 chr5 20435311 20435621 -182649911 + AluSq SINE Alu 1 299 -14 218 380 36 36 chr5 20436564 20436701 -182648831 + L2 LINE L2 3136 3272 0 228 290 32 0 chr5 20437811 20437873 -182647659 - L2 LINE L2 -224 3048 2985 1213 171 0 5 chr5 20437937 20438136 -182647396 + AluJb SINE Alu 107 304 -8 297 319 7 44 chr5 20438912 20439047 -182646485 + L2 LINE L2 3183 3312 -1 642 269 66 0 chr5 20439138 20439380 -182646152 - MIR SINE MIR 0 262 5 628 109 10 0 chr5 20439497 20439598 -182645934 + L1MB4 LINE L1 6077 6178 -2 226 211 28 70 chr5 20440023 20440094 -182645438 + L2 LINE L2 3201 3268 -4 2233 91 3 10 chr5 20440518 20440815 -182644717 + AluSx SINE Alu 5 299 -13 21 0 0 0 chr5 20441527 20441548 -182643984 + AT_rich Low_complexity Low_complexity 1 21 0 1237 214 40 3 chr5 20441578 20441882 -182643650 - MER39 LTR ERV1 0 707 393 3544 33 0 0 chr5 20441926 20442345 -182643187 + L1PA5 LINE L1 5724 6142 -12 290 291 39 0 chr5 20442360 20442492 -182643040 - MER39 LTR ERV1 -320 387 115 233 174 0 0 chr5 20442519 20442565 -182642967 - MER39 LTR ERV1 -661 46 1 477 165 72 0 chr5 20442733 20442830 -182642702 + MER58C DNA MER1_type 112 215 0 708 139 23 8 chr5 20443439 20443568 -182641964 + MER20 DNA MER1_type 30 160 -59 1072 125 20 50 chr5 20444300 20444500 -182641032 + MER31A LTR ERV1 1 194 -291 807 239 27 0 chr5 20445312 20445496 -182640036 - AluJo SINE Alu -4 308 120 419 307 101 51 chr5 20445498 20445873 -182639659 - L1MC/D LINE L1 -456 5665 5394 1512 190 133 12 chr5 20445883 20446283 -182639249 - MER39 LTR ERV1 0 707 260 1256 172 96 98 chr5 20446289 20446655 -182638877 - MLT1A1 LTR MaLR 0 365 1 1028 148 0 13 chr5 20446957 20447112 -182638420 - AluJb SINE Alu -18 294 142 432 217 42 28 chr5 20447118 20447261 -182638271 + L1MA9 LINE L1 6143 6287 -25 4454 209 15 41 chr5 20447296 20448326 -182637206 + L1PA11 LINE L1 3 1005 -6576 11401 88 2 1 chr5 20448333 20449893 -182635639 - THE1B-int LTR MaLR -18 1562 1 1785 122 131 24 chr5 20449893 20450222 -182635310 - THE1B LTR MaLR 0 364 1 20685 155 8 10 chr5 20450222 20455093 -182630439 + L1PA11 LINE L1 2680 7551 -61 218 32 32 0 chr5 20455376 20455407 -182630125 + (TC)n Simple_repeat Simple_repeat 1 32 0 517 297 36 12 chr5 20455786 20455951 -182629581 - MIR SINE MIR -59 203 35 2435 118 30 57 chr5 20455968 20456408 -182629124 + MSTA LTR MaLR 1 428 0 2138 143 31 8 chr5 20456424 20456780 -182628752 + THE1B LTR MaLR 1 364 0 387 351 30 71 chr5 20457076 20457415 -182628117 + L1MEd LINE L1 244 568 -5551 2657 168 48 5 chr5 20457738 20458298 -182627234 + L1PB4 LINE L1 5573 6156 0 791 234 15 10 chr5 20458641 20458842 -182626690 - MER45C DNA AcHobo -751 202 1 284 179 77 6 chr5 20458842 20458919 -182626613 - MER90 LTR ERV1 -526 88 1 553 278 115 86 chr5 20458920 20459291 -182626241 - HAL1 LINE L1 -1873 634 233 507 119 24 0 chr5 20459291 20459419 -182626113 + L1PB1 LINE L1 6053 6182 0 553 278 115 86 chr5 20459419 20459660 -182625872 - HAL1 LINE L1 -2274 233 1 609 264 68 0 chr5 20460304 20460452 -182625080 - MER63A DNA MER1_type 0 210 53 3289 326 130 26 chr5 20462519 20464639 -182620893 - L2 LINE L2 0 3313 863 2039 116 71 14 chr5 20464639 20464992 -182620540 + THE1C LTR MaLR 1 373 -2 3289 326 130 26 chr5 20464992 20465639 -182619893 - L2 LINE L2 -2450 863 285 394 232 101 43 chr5 20465651 20465789 -182619743 - L2 LINE L2 -1 3312 3167 1832 200 42 26 chr5 20466070 20466525 -182619007 - MLT1C LTR MaLR 0 467 6 1468 174 82 55 chr5 20466781 20467161 -182618371 + MLT1B LTR MaLR 1 390 0 216 217 0 0 chr5 20467286 20467332 -182618200 - L2 LINE L2 -5 3308 3263 637 244 167 9 chr5 20468424 20468645 -182616887 + MIR SINE MIR 2 257 -5 207 0 0 0 chr5 20469114 20469137 -182616395 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 20469888 20469910 -182615622 + AT_rich Low_complexity Low_complexity 1 22 0 386 340 20 7 chr5 20471704 20471851 -182613681 + MER5A DNA MER1_type 40 188 -1 659 315 37 42 chr5 20471967 20472370 -182613162 + L2 LINE L2 2544 2944 -370 565 286 172 54 chr5 20473612 20474097 -182611435 - MLT1H1 LTR MaLR 0 555 16 413 289 78 94 chr5 20474107 20474480 -182611052 + L2 LINE L2 2946 3312 -1 180 333 14 0 chr5 20474916 20474988 -182610544 - MIR SINE MIR -1 261 189 27 73 0 0 chr5 20476260 20476315 -182609217 + AT_rich Low_complexity Low_complexity 1 55 0 5858 149 13 24 chr5 20476588 20477729 -182607803 + L1MA4 LINE L1 5160 6296 -4 23 33 0 0 chr5 20477729 20477759 -182607773 + AT_rich Low_complexity Low_complexity 1 30 0 1042 186 11 0 chr5 20479067 20479250 -182606282 - MER58A DNA MER1_type 0 224 40 5064 158 12 63 chr5 20479250 20480075 -182605457 + L1MA9 LINE L1 5117 5873 -439 2616 146 14 9 chr5 20480075 20480501 -182605031 + MSTA LTR MaLR 1 428 0 5064 158 12 63 chr5 20480501 20480896 -182604636 + L1MA9 LINE L1 5873 6287 -25 1839 164 37 11 chr5 20481664 20482018 -182603514 + L1MC1 LINE L1 5968 6330 -3 1191 251 152 15 chr5 20482220 20482736 -182602796 + MLT1G1 LTR MaLR 5 557 -10 22 0 0 0 chr5 20483022 20483044 -182602488 + AT_rich Low_complexity Low_complexity 1 22 0 273 145 14 29 chr5 20484005 20484074 -182601458 + CT-rich Low_complexity Low_complexity 1 68 0 423 309 104 31 chr5 20484150 20484438 -182601094 - MLT1L LTR MaLR -157 458 150 270 394 32 36 chr5 20484554 20485084 -182600448 + L2 LINE L2 2048 2575 -739 321 298 41 8 chr5 20485183 20485304 -182600228 + L2 LINE L2 3159 3283 -30 181 365 14 0 chr5 20485641 20485715 -182599817 + MIR3 SINE MIR 133 207 -1 308 281 243 29 chr5 20486362 20486525 -182599007 - MIR3 SINE MIR -66 142 7 534 316 73 66 chr5 20486835 20487685 -182597847 + L1MEc LINE L1 22 877 -5519 591 284 64 56 chr5 20487795 20488168 -182597364 + L1MEc LINE L1 1438 1813 -4583 201 154 0 0 chr5 20488230 20488269 -182597263 + T-rich Low_complexity Low_complexity 2 40 0 1769 251 139 9 chr5 20488296 20489214 -182596318 + L1MEc LINE L1 2623 3660 -2555 2258 126 0 3 chr5 20489267 20489576 -182595956 - AluSc SINE Alu -1 308 1 819 236 219 0 chr5 20489858 20490168 -182595364 + L2 LINE L2 1735 2112 -1202 317 212 64 136 chr5 20490178 20490316 -182595216 + MER112 DNA MER1_type 40 156 -104 5201 146 19 36 chr5 20490316 20491235 -182594297 - MER4D LTR ERV1 0 903 1 317 212 64 136 chr5 20491235 20491332 -182594200 + MER112 DNA MER1_type 156 258 -2 1726 315 134 10 chr5 20491336 20492391 -182593141 + L2 LINE L2 2118 3311 -2 2827 97 2 15 chr5 20492408 20492810 -182592722 + MSTA-int LTR MaLR 1184 1580 0 1473 153 216 46 chr5 20492810 20493176 -182592356 + MSTA LTR MaLR 1 428 0 314 310 138 76 chr5 20493556 20493953 -182591579 - L2 LINE L2 -1 3271 2850 315 335 102 42 chr5 20494078 20494559 -182590973 - L2 LINE L2 -665 2649 2140 303 206 55 0 chr5 20495112 20495185 -182590347 + MER69 DNA AcHobo 2450 2526 0 21 82 0 0 chr5 20495222 20495271 -182590261 + AT_rich Low_complexity Low_complexity 1 49 0 2059 120 0 0 chr5 20495709 20496000 -182589532 - AluSx SINE Alu -9 303 13 498 99 0 0 chr5 20496252 20496323 -182589209 + Alu SINE Alu 233 303 -6 320 286 122 0 chr5 20496578 20496676 -182588856 + MIR SINE MIR 37 146 -62 370 283 101 44 chr5 20497221 20497380 -182588152 - MIR3 SINE MIR -20 188 21 309 265 82 41 chr5 20498282 20498380 -182587152 + MIR SINE MIR 42 143 -65 267 191 103 0 chr5 20499030 20499098 -182586434 + L2 LINE L2 3221 3295 -18 200 246 88 35 chr5 20499806 20499863 -182585669 + MIR SINE MIR 84 143 -65 554 175 103 0 chr5 20500168 20500294 -182585238 - MER69 DNA AcHobo -5 2521 2383 290 279 174 75 chr5 20500406 20500567 -182584965 - MER5A DNA MER1_type 0 189 13 1998 233 100 50 chr5 20500717 20500888 -182584644 + Charlie2 DNA MER1_type 1858 2019 -843 1588 181 28 21 chr5 20500888 20501175 -182584357 + AluJo SINE Alu 1 289 -23 1998 233 100 50 chr5 20501175 20501272 -182584260 + Charlie2 DNA MER1_type 2019 2110 -752 1903 86 12 0 chr5 20501272 20501528 -182584004 - L1PA11 LINE L1 -5 6169 5911 1998 233 100 50 chr5 20501528 20502215 -182583317 + Charlie2 DNA MER1_type 2110 2862 0 1523 185 52 37 chr5 20502396 20502796 -182582736 - MLT1C LTR MaLR -2 388 1 537 305 80 25 chr5 20502812 20503324 -182582208 + L2 LINE L2 2005 2611 -703 191 278 37 0 chr5 20503326 20503380 -182582152 + L2 LINE L2 2756 2811 -503 1147 254 27 19 chr5 20503381 20503755 -182581777 + LTR37B LTR ERV1 77 453 -15 2027 125 3 22 chr5 20503898 20504253 -182581279 - AluSx SINE Alu 0 349 1 223 209 0 0 chr5 20503916 20504270 -182581262 + CT-rich Low_complexity Low_complexity 2 44 0 1424 126 22 37 chr5 20504998 20505269 -182580263 + L1MA8 LINE L1 6020 6286 -5 269 203 16 16 chr5 20505762 20505826 -182579706 + MER31-int LTR ERV1 3400 3463 -1473 915 229 30 60 chr5 20506142 20506274 -182579258 + MER99 DNA DNA 569 691 -137 2045 141 7 0 chr5 20506274 20506572 -182578960 - AluSx SINE Alu -11 301 2 915 229 30 60 chr5 20506572 20506706 -182578826 + MER99 DNA DNA 691 827 -1 1416 191 47 42 chr5 20506707 20507110 -182578422 + LTR37B LTR ERV1 57 461 -7 193 337 50 30 chr5 20507201 20507302 -182578230 + L2 LINE L2 3151 3253 -19 7462 86 16 6 chr5 20507510 20508662 -182576870 + L1MA1 LINE L1 5141 6302 0 365 244 144 82 chr5 20508984 20509352 -182576180 + MER110 LTR ERV1 80 440 -51 1031 233 0 0 chr5 20510278 20510484 -182575048 - MER58A DNA MER1_type 0 224 19 26 0 0 0 chr5 20510989 20511015 -182574517 + AT_rich Low_complexity Low_complexity 1 26 0 885 132 0 7 chr5 20511960 20512096 -182573436 + MLT2B2 LTR ERVL 5 139 -376 641 203 0 51 chr5 20512099 20512217 -182573315 + FLAM_A SINE Alu 12 123 -19 * 1119 204 21 38 chr5 20512211 20512490 -182573042 + MLT2B1 LTR ERVL 132 457 -63 1977 177 32 6 chr5 20512490 20512829 -182572703 + MER7A DNA MER2_type 1 346 0 1119 204 21 38 chr5 20512829 20512891 -182572641 + MLT2B1 LTR ERVL 457 519 -1 9696 26 10 206 chr5 20513245 20514970 -182570562 - SVA Other Other 0 1386 1 4202 55 19 21 chr5 20515178 20515745 -182569787 - SVA Other Other -820 566 1 226 253 34 79 chr5 20515749 20515927 -182569605 - MER97c DNA MER1_type? -27 1063 894 1330 224 55 42 chr5 20516024 20516176 -182569356 + MLT1C LTR MaLR 84 233 -234 3561 185 136 22 chr5 20516176 20516917 -182568615 + LTR1B LTR ERV1 1 826 0 1330 224 55 42 chr5 20516917 20517143 -182568389 + MLT1C LTR MaLR 233 467 0 312 278 19 9 chr5 20517143 20517250 -182568282 - MER97c DNA MER1_type? -221 869 762 2145 205 148 61 chr5 20517530 20518280 -182567252 - LTR1B LTR ERV1 -2 824 10 2182 252 39 22 chr5 20518359 20518954 -182566578 - MER97c DNA MER1_type? -485 605 1 1579 161 61 21 chr5 20518985 20519366 -182566166 - MLT1C LTR MaLR 0 390 1 287 272 49 12 chr5 20520251 20520356 -182565176 - MIR SINE MIR -90 118 9 299 298 8 50 chr5 20522478 20522599 -182562933 + MLT1J LTR MaLR 18 133 -378 521 125 0 12 chr5 20522611 20522691 -182562841 - MSTA LTR MaLR 0 428 350 760 119 0 10 chr5 20522692 20522793 -182562739 - AluSg SINE Alu -209 101 2 1804 89 4 0 chr5 20522795 20523031 -182562501 - THE1A LTR MaLR -118 237 1 1046 158 0 12 chr5 20523191 20523355 -182562177 + FRAM SINE Alu 3 164 -2 475 232 114 38 chr5 20523665 20523876 -182561656 - L1MC5 LINE L1 -35 7926 7700 1518 96 9 32 chr5 20523880 20524098 -182561434 + AluSp SINE Alu 90 302 -11 661 296 108 76 chr5 20524515 20525064 -182560468 - L2 LINE L2 0 3313 2738 1644 281 101 102 chr5 20525075 20526870 -182558662 - L2 LINE L2 -729 2585 793 562 270 8 0 chr5 20526879 20527005 -182558527 + MER33 DNA MER1_type 1 127 -197 960 304 44 44 chr5 20527902 20528353 -182557179 - L2 LINE L2 0 3313 2863 1287 208 38 58 chr5 20528386 20528427 -182557105 + MER96B DNA MER1_type? 25 65 -352 8043 32 0 1 chr5 20528427 20529328 -182556204 + L1PA4 LINE L1 5254 6153 -2 1287 208 38 58 chr5 20529328 20529686 -182555846 + MER96B DNA MER1_type? 65 416 -1 5180 191 54 20 chr5 20529724 20530826 -182554706 - L1MC3 LINE L1 0 7785 6646 27 29 0 0 chr5 20530910 20530944 -182554588 + AT_rich Low_complexity Low_complexity 1 34 0 201 196 0 0 chr5 20531208 20531254 -182554278 + CT-rich Low_complexity Low_complexity 4 49 0 1105 158 42 35 chr5 20531357 20531617 -182553915 + MER65A-int LTR ERV1 5419 5680 -651 1541 250 52 29 chr5 20531624 20532104 -182553428 + MER65A-int LTR ERV1 4381 4871 0 1575 209 85 40 chr5 20532104 20532526 -182553006 + MER65A LTR ERV1 1 441 -4 894 328 87 12 chr5 20532562 20533111 -182552421 + L2 LINE L2 2714 3301 -12 372 43 0 0 chr5 20533242 20533288 -182552244 + (CA)n Simple_repeat Simple_repeat 2 47 0 206 192 19 0 chr5 20533293 20533345 -182552187 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 7296 206 10 11 chr5 20533746 20535298 -182550234 - L1P LINE L1 -2583 3563 2013 9004 172 13 21 chr5 20535301 20537800 -182547732 + L1PA13 LINE L1 3620 6159 -4 230 79 0 26 chr5 20537830 20537868 -182547664 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 268 330 146 0 chr5 20539023 20539126 -182546406 - L2 LINE L2 -5 3308 3191 1232 224 149 17 chr5 20539464 20539866 -182545666 + L1MC4 LINE L1 7438 7892 -150 1951 173 35 3 chr5 20539911 20540253 -182545279 - MLT2C2 LTR ERVL -111 353 1 279 314 57 0 chr5 20540299 20540404 -182545128 - L2 LINE L2 -924 2390 2280 308 282 7 45 chr5 20540753 20540839 -182544693 + MIR SINE MIR 66 141 -121 2426 103 0 0 chr5 20540839 20541151 -182544381 + AluSq SINE Alu 1 312 -1 308 282 7 45 chr5 20541151 20541215 -182544317 + MIR SINE MIR 141 206 -56 2512 64 0 0 chr5 20541279 20541576 -182543956 + AluY SINE Alu 1 297 -14 507 182 101 0 chr5 20542277 20542376 -182543156 - L2 LINE L2 -4 3309 3201 3639 169 13 2 chr5 20542585 20543188 -182542344 - MER72 LTR ERV1 -22 700 91 25 0 0 0 chr5 20543572 20543597 -182541935 + AT_rich Low_complexity Low_complexity 1 25 0 180 77 0 0 chr5 20543735 20543761 -182541771 + (CA)n Simple_repeat Simple_repeat 2 27 0 323 398 98 4 chr5 20543837 20544101 -182541431 - L2 LINE L2 -559 2755 2467 186 274 53 95 chr5 20545212 20545307 -182540225 - MER5A DNA MER1_type -7 182 92 184 271 51 34 chr5 20546432 20546491 -182539041 + MIR3 SINE MIR 118 177 -31 24 0 0 0 chr5 20546553 20546577 -182538955 + AT_rich Low_complexity Low_complexity 1 24 0 3832 134 4 11 chr5 20547005 20547536 -182537996 - MER1A DNA MER1_type 0 527 1 197 301 68 80 chr5 20547660 20547836 -182537696 + L3b LINE CR1 1322 1495 -88 222 37 0 0 chr5 20547837 20547864 -182537668 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 216 254 91 0 chr5 20548181 20548236 -182537296 + L3 LINE CR1 1425 1484 -93 210 37 0 0 chr5 20549713 20549740 -182535792 + (TG)n Simple_repeat Simple_repeat 1 27 0 295 301 24 0 chr5 20550333 20550416 -182535116 - L2 LINE L2 -4 3309 3225 2241 109 3 10 chr5 20550421 20550732 -182534800 + AluSx SINE Alu 1 309 -3 231 266 0 0 chr5 20550775 20550839 -182534693 - L2 LINE L2 -83 3230 3167 860 299 12 8 chr5 20550860 20551114 -182534418 + MIR SINE MIR 8 262 0 423 298 103 4 chr5 20551123 20551456 -182534076 - L2 LINE L2 -167 3146 2781 183 170 75 38 chr5 20551798 20551851 -182533681 + MIR SINE MIR 136 190 -72 550 271 54 12 chr5 20552226 20552392 -182533140 - MER5B DNA MER1_type 0 178 6 521 202 101 17 chr5 20552717 20552836 -182532696 - L2 LINE L2 -3 3310 3182 787 259 79 40 chr5 20552945 20553366 -182532166 + LTR33 LTR ERVL 49 518 -3 286 276 0 0 chr5 20554227 20554285 -182531247 - MER81 DNA DNA -2 112 55 234 247 236 0 chr5 20554963 20555052 -182530480 - MER5B DNA MER1_type -7 171 62 1105 64 0 14 chr5 20555081 20555222 -182530310 - Alu SINE Alu -7 304 166 242 225 84 0 chr5 20555351 20555422 -182530110 - MIR3 SINE MIR -19 189 113 182 150 25 0 chr5 20556060 20556100 -182529432 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 348 127 0 0 chr5 20556615 20556670 -182528862 + (TA)n Simple_repeat Simple_repeat 2 56 0 267 152 0 0 chr5 20556672 20556718 -182528814 - LTR66 LTR ERVL -171 439 394 473 315 289 3 chr5 20557630 20557941 -182527591 - L2 LINE L2 -6 3307 2908 2855 261 194 24 chr5 20558697 20558931 -182526601 + L2 LINE L2 601 794 -2520 2321 113 0 0 chr5 20558931 20559231 -182526301 - AluSx SINE Alu -12 300 1 2855 261 194 24 chr5 20559231 20560365 -182525167 + L2 LINE L2 794 2201 -1113 1212 167 35 18 chr5 20560367 20560595 -182524937 - LOR1a LTR ERV1 0 497 266 2644 105 32 2 chr5 20560607 20561007 -182524525 - LOR1-int LTR ERV1 -4763 3357 2946 1826 186 0 3 chr5 20561007 20561314 -182524218 + LOR1a LTR ERV1 192 497 0 712 161 42 14 chr5 20561337 20561480 -182524052 - Charlie4 DNA MER1_type 0 1961 1815 1161 297 144 19 chr5 20561652 20562427 -182523105 + L2 LINE L2 2367 3242 -71 2001 157 69 5 chr5 20562427 20562803 -182522729 + MSTA LTR MaLR 1 400 -28 6975 54 14 22 chr5 20563118 20564092 -182521440 - L1PA8 LINE L1 -13 6159 5184 11426 98 3 6 chr5 20564095 20565814 -182519718 + L1PA8 LINE L1 3485 5198 -948 351 109 0 31 chr5 20566075 20566139 -182519393 + L1MA10 LINE L1 6225 6286 -48 442 166 18 142 chr5 20566139 20566308 -182519224 + MLT1A1 LTR MaLR 1 148 -217 241 245 10 51 chr5 20566426 20566524 -182519008 + LTR55 LTR ERV 412 505 -43 * 423 268 33 55 chr5 20566513 20566524 -182519008 - MER21B LTR ERV1 -587 276 266 6305 148 11 0 chr5 20566524 20567195 -182518337 - L1PA11 LINE L1 -1 6173 5511 2272 84 14 3 chr5 20567195 20567491 -182518041 - AluY SINE Alu -12 299 1 6305 148 11 0 chr5 20567491 20568686 -182516846 - L1PA11 LINE L1 -663 5511 4282 423 268 33 55 chr5 20568686 20568857 -182516675 - MER21B LTR ERV1 -597 266 98 260 270 27 14 chr5 20568910 20568984 -182516548 - MER21B LTR ERV1 -773 90 16 2287 89 0 19 chr5 20568984 20569297 -182516235 - AluSx SINE Alu -5 307 1 198 167 0 0 chr5 20569550 20569586 -182515946 + (TG)n Simple_repeat Simple_repeat 1 36 0 270 0 0 0 chr5 20569977 20570007 -182515525 + (TG)n Simple_repeat Simple_repeat 2 31 0 1269 226 53 55 chr5 20570018 20570452 -182515080 + LTR47B LTR ERVL 11 443 0 445 236 18 9 chr5 20570487 20570597 -182514935 + MER34 LTR ERV1 1 111 -431 347 252 38 15 chr5 20570615 20570746 -182514786 + MER65A LTR ERV1 1 134 -311 599 221 32 25 chr5 20571180 20571407 -182514125 + MER34 LTR ERV1 273 520 -45 21 0 0 0 chr5 20571572 20571593 -182513939 + AT_rich Low_complexity Low_complexity 1 21 0 296 260 10 50 chr5 20571743 20571843 -182513689 + L1MEd LINE L1 439 534 -5585 22 0 0 0 chr5 20571855 20571877 -182513655 + AT_rich Low_complexity Low_complexity 1 22 0 227 219 207 0 chr5 20571924 20572006 -182513526 - HsTC2 DNA Tc2 -1793 105 7 476 256 135 42 chr5 20572071 20572286 -182513246 + MIR SINE MIR 9 243 -19 190 261 43 0 chr5 20572255 20572301 -182513231 + L2 LINE L2 3217 3264 -8 * 1561 177 9 47 chr5 20572608 20572925 -182512607 - AluJo SINE Alu -7 305 1 315 49 0 0 chr5 20573137 20573178 -182512354 + (CCCTAA)n Simple_repeat Simple_repeat 3 43 0 963 75 0 0 chr5 20573767 20573901 -182511631 + L1PA2 LINE L1 6022 6155 0 272 221 44 0 chr5 20573906 20573974 -182511558 - Charlie4 DNA MER1_type -1874 87 17 1681 182 48 31 chr5 20574202 20574560 -182510972 + MLT1A1 LTR MaLR 1 364 -1 263 234 32 32 chr5 20574966 20575060 -182510472 + MLT1I LTR MaLR 291 384 -25 1195 200 39 60 chr5 20575381 20575750 -182509782 + MLT1A2 LTR MaLR 11 374 0 550 303 144 5 chr5 20575979 20576174 -182509358 - MIR SINE MIR -25 237 16 2040 82 3 57 chr5 20576344 20576675 -182508857 - L1PA13 LINE L1 -2 6161 5849 256 139 292 14 chr5 20576756 20576828 -182508704 + MER39 LTR ERV1 1 92 -615 478 165 91 0 chr5 20576838 20576959 -182508573 + LTR48 LTR ERV1 177 308 -479 516 234 98 61 chr5 20576968 20577302 -182508230 + LTR48 LTR ERV1 238 774 0 544 283 58 0 chr5 20577382 20577573 -182507959 - L2 LINE L2 0 3313 3112 3939 148 21 27 chr5 20577792 20578507 -182507025 - MER50 LTR ERV1 -23 711 1 1162 214 132 82 chr5 20578947 20579279 -182506253 + MLT1E2 LTR MaLR 111 477 -149 2351 99 3 0 chr5 20579279 20579591 -182505941 - AluSp SINE Alu 0 313 1 1162 214 132 82 chr5 20579591 20579749 -182505783 + MLT1E2 LTR MaLR 477 626 0 219 239 130 33 chr5 20580266 20580358 -182505174 + MIR SINE MIR 96 196 -66 8650 24 0 0 chr5 20580394 20582178 -182503354 - L1PA3 LINE L1 -1 6154 4369 30480 39 34 5 chr5 20582278 20586299 -182499233 - L1PA3 LINE L1 -2007 4139 2 1013 188 79 4 chr5 20586311 20586577 -182498955 + Charlie4a DNA MER1_type 70 355 -153 22 35 0 0 chr5 20586583 20586612 -182498920 + AT_rich Low_complexity Low_complexity 1 29 0 7843 203 86 18 chr5 20586612 20588386 -182497146 - L1MC1 LINE L1 -13 6389 4737 1123 214 78 42 chr5 20588386 20588718 -182496814 - MER2 DNA MER2_type 0 344 1 7843 203 86 18 chr5 20588718 20590607 -182494925 - L1MC1 LINE L1 -1665 4737 2461 1476 116 14 0 chr5 20590607 20590814 -182494718 - AluSx SINE Alu -15 297 88 471 70 0 0 chr5 20590814 20590885 -182494647 - L1MCa LINE L1 -4430 1996 1926 653 117 48 19 chr5 20590910 20591013 -182494519 - AluSx SINE Alu -205 108 3 2072 197 35 38 chr5 20591015 20591135 -182494397 - L1MC1 LINE L1 -3888 2508 2389 1777 177 14 3 chr5 20591135 20591429 -182494103 - AluJb SINE Alu -15 297 1 2072 197 35 38 chr5 20591429 20592035 -182493497 - L1MC1 LINE L1 -4007 2389 1820 2107 123 6 19 chr5 20592037 20592353 -182493179 + AluSx SINE Alu 1 312 0 1995 118 0 0 chr5 20592374 20592653 -182492879 + AluY SINE Alu 1 279 -32 2405 67 0 17 chr5 20592787 20593085 -182492447 + AluY SINE Alu 1 293 -18 628 76 0 0 chr5 20593658 20593750 -182491782 - L1PB1 LINE L1 0 6151 6060 2178 165 48 10 chr5 20593751 20594150 -182491382 + MLT2D LTR ERVL 1 414 0 267 261 59 17 chr5 20595654 20595773 -182489759 + L1ME LINE L1 4069 4192 -1954 22 70 0 0 chr5 20595783 20595826 -182489706 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 20595863 20595885 -182489647 + AT_rich Low_complexity Low_complexity 1 22 0 358 207 193 0 chr5 20595977 20596117 -182489415 + L1ME LINE L1 4483 4649 -1497 390 291 106 20 chr5 20596132 20596386 -182489146 + L1ME LINE L1 4905 5180 -966 479 275 72 48 chr5 20596591 20596965 -182488567 + L1ME LINE L1 5309 5691 -471 2350 146 24 16 chr5 20596993 20597417 -182488115 + MSTA LTR MaLR 2 428 0 259 219 14 0 chr5 20597478 20597551 -182487981 + MER82 DNA MER2_type 127 200 -453 1237 151 75 0 chr5 20597553 20597792 -182487740 + Tigger1 DNA MER2_type 3 259 -2159 528 221 8 25 chr5 20599087 20599209 -182486323 + MER94 DNA DNA 3 122 -12 22 0 0 0 chr5 20601119 20601141 -182484391 + AT_rich Low_complexity Low_complexity 1 22 0 734 189 47 21 chr5 20601453 20601643 -182483889 - MER20 DNA MER1_type -7 212 18 3789 155 138 7 chr5 20601729 20602459 -182483073 + LTR1B LTR ERV1 1 826 0 200 215 46 15 chr5 20602547 20602612 -182482920 - L3b LINE CR1 -197 1386 1320 415 134 98 0 chr5 20604828 20604910 -182480622 - MER34C LTR ERV1 0 585 496 1253 162 13 0 chr5 20604913 20605148 -182480384 + L1MA8 LINE L1 4817 5054 -1092 368 257 68 47 chr5 20605447 20605595 -182479937 - MIR SINE MIR -38 224 74 234 0 0 0 chr5 20606537 20606563 -182478969 + (A)n Simple_repeat Simple_repeat 1 26 0 407 223 19 0 chr5 20606926 20607029 -182478503 - Charlie4a DNA MER1_type -376 132 28 400 204 57 70 chr5 20608900 20609057 -182476475 - Charlie4 DNA MER1_type 0 1961 1807 7755 158 39 28 chr5 20609057 20610760 -182474772 + L1MCa LINE L1 1 1806 -4620 3729 147 30 4 chr5 20610864 20611739 -182473793 + L1MA8 LINE L1 5024 5912 -379 1922 190 16 13 chr5 20611739 20612123 -182473409 + MSTD LTR MaLR 1 385 -11 1799 131 31 47 chr5 20612125 20612506 -182473026 + L1MA8 LINE L1 5909 6283 -8 1647 206 42 44 chr5 20612528 20613004 -182472528 - MER34B LTR ERV1 -80 485 11 2162 247 177 13 chr5 20613014 20613974 -182471558 - L1ME3A LINE L1 -97 6073 4957 2133 119 3 6 chr5 20615272 20615583 -182469949 - AluSx SINE Alu -1 311 2 234 0 0 0 chr5 20616042 20616068 -182469464 + (TG)n Simple_repeat Simple_repeat 2 27 0 1487 206 14 3 chr5 20616068 20616360 -182469172 - MLT1A1 LTR MaLR -3 362 68 429 20 0 0 chr5 20616458 20616508 -182469024 + (TG)n Simple_repeat Simple_repeat 1 50 0 226 284 12 37 chr5 20616802 20616883 -182468649 + L2 LINE L2 3108 3186 -86 * 285 293 193 19 chr5 20616879 20617091 -182468441 - MIR SINE MIR -13 249 1 25 31 0 0 chr5 20618565 20618597 -182466935 + AT_rich Low_complexity Low_complexity 1 32 0 282 119 0 2 chr5 20618598 20618648 -182466884 + L1M3 LINE L1 5474 5522 -652 678 263 10 36 chr5 20618769 20618963 -182466569 + Charlie1a DNA MER1_type 4 192 -1263 1145 224 65 63 chr5 20618969 20619399 -182466133 + MER39 LTR ERV1 1 619 -88 4877 195 25 23 chr5 20619467 20620499 -182465033 + Charlie1a DNA MER1_type 194 1227 -228 994 186 38 113 chr5 20620504 20620822 -182464710 - L1MA7 LINE L1 -22 6290 5997 620 209 139 11 chr5 20620823 20621010 -182464522 + Charlie1a DNA MER1_type 1245 1455 0 182 300 33 17 chr5 20622070 20622130 -182463402 - MIR SINE MIR -200 62 2 273 98 0 0 chr5 20622199 20622240 -182463292 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 225 0 0 0 chr5 20622366 20622391 -182463141 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2375 181 66 70 chr5 20622767 20623309 -182462223 - MLT1F LTR MaLR 0 542 3 281 344 91 82 chr5 20623635 20623975 -182461557 - L2 LINE L2 -105 3167 2825 827 305 82 77 chr5 20624738 20625658 -182459874 - L1MEd LINE L1 -5192 927 4 207 300 33 0 chr5 20626923 20626983 -182458549 + MIR SINE MIR 9 70 -192 2265 175 8 3 chr5 20627011 20627394 -182458138 + MLT1B LTR MaLR 6 390 0 2219 147 73 52 chr5 20627438 20627498 -182458034 - MSTB1 LTR MaLR 0 432 375 2375 97 0 3 chr5 20627498 20627806 -182457726 - AluY SINE Alu -4 307 1 2219 147 73 52 chr5 20627806 20628168 -182457364 - MSTB1 LTR MaLR -57 375 1 2749 23 0 0 chr5 20628188 20628491 -182457041 + AluYb8 SINE Alu 1 303 -15 219 36 0 0 chr5 20628491 20628519 -182457013 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 20628626 20628654 -182456878 + AT_rich Low_complexity Low_complexity 1 28 0 2055 155 0 0 chr5 20632495 20632798 -182452734 + AluSx SINE Alu 1 303 -9 239 216 59 0 chr5 20633056 20633107 -182452425 - MER82 DNA MER2_type -395 258 205 2117 80 77 0 chr5 20633108 20633394 -182452138 + AluY SINE Alu 1 308 -3 1980 157 40 3 chr5 20633418 20633769 -182451763 - Tigger1 DNA MER2_type 0 2418 2055 39157 82 16 6 chr5 20633774 20639857 -182445675 - L1PA6 LINE L1 0 6154 11 4389 125 68 1 chr5 20639875 20640563 -182444969 - Tigger1 DNA MER2_type -334 2084 1351 * 6893 130 50 2 chr5 20640549 20641609 -182443923 - Tigger1 DNA MER2_type -1305 1113 3 292 219 14 0 chr5 20641611 20641684 -182443848 - MER82 DNA MER2_type -453 200 127 626 282 66 48 chr5 20641686 20641745 -182443787 - L1ME LINE L1 -396 5774 5718 2550 146 24 16 chr5 20641745 20642169 -182443363 - MSTA LTR MaLR 0 428 2 626 282 66 48 chr5 20642169 20642572 -182442960 - L1ME LINE L1 -452 5718 5309 290 245 168 34 chr5 20642676 20642974 -182442558 - L1ME LINE L1 -846 5300 4963 255 228 297 43 chr5 20643046 20643511 -182442021 - L1ME LINE L1 -1497 4649 4067 2353 168 48 10 chr5 20645014 20645413 -182440119 - MLT2D LTR ERVL 0 414 1 675 76 0 0 chr5 20645414 20645506 -182440026 + L1PB1 LINE L1 6060 6151 0 2421 71 0 14 chr5 20646079 20646376 -182439156 - AluY SINE Alu -18 293 1 2234 125 0 0 chr5 20646470 20646775 -182438757 - AluSx SINE Alu -7 305 1 214 233 0 0 chr5 20647188 20647231 -182438301 - L2 LINE L2 -2 3311 3269 1183 184 142 63 chr5 20648575 20648906 -182436626 + MLT1A1 LTR MaLR 1 357 -8 424 246 25 34 chr5 20649036 20649182 -182436350 + MIR SINE MIR 27 172 -63 230 274 17 120 chr5 20649385 20649502 -182436030 + MER5B DNA MER1_type 6 110 -68 236 109 0 22 chr5 20650355 20650401 -182435131 + (CA)n Simple_repeat Simple_repeat 2 46 0 183 156 0 0 chr5 20650403 20650435 -182435097 + (TG)n Simple_repeat Simple_repeat 1 32 0 303 335 164 7 chr5 20650630 20650782 -182434750 - MLT1L LTR MaLR -88 527 352 723 253 40 20 chr5 20651376 20651574 -182433958 - MLT1A2 LTR MaLR -16 358 157 615 202 8 0 chr5 20651666 20651785 -182433747 + MER96B DNA MER1_type? 298 417 0 21 71 0 0 chr5 20651853 20651895 -182433637 + AT_rich Low_complexity Low_complexity 1 42 0 297 320 33 53 chr5 20652985 20653135 -182432397 + MIR3 SINE MIR 30 176 -32 1613 222 57 22 chr5 20653421 20653973 -182431559 - MER90 LTR ERV1 0 614 5 811 165 256 6 chr5 20654803 20654967 -182430565 - MER7A DNA MER2_type -143 203 1 1106 187 74 37 chr5 20654973 20655272 -182430260 + L1MC5 LINE L1 7601 7910 -51 2180 95 39 0 chr5 20655274 20655559 -182429973 + AluSq SINE Alu 1 296 -17 23 0 0 0 chr5 20655569 20655592 -182429940 + AT_rich Low_complexity Low_complexity 1 23 0 267 305 153 3 chr5 20655902 20656081 -182429451 + MIR SINE MIR 4 262 0 2050 198 24 55 chr5 20656182 20656687 -182428845 - MER65B LTR ERV1 -42 489 1 2358 152 33 35 chr5 20656690 20657119 -182428413 - Tigger2a DNA MER2_type 0 434 7 306 309 72 15 chr5 20657719 20657912 -182427620 - MIR SINE MIR 0 208 5 257 128 21 0 chr5 20657984 20658031 -182427501 + GA-rich Low_complexity Low_complexity 5 52 0 25 95 0 0 chr5 20658099 20658173 -182427359 + AT_rich Low_complexity Low_complexity 1 74 0 2464 58 0 32 chr5 20658253 20658562 -182426970 - AluY SINE Alu -12 299 1 2930 76 98 5 chr5 20658749 20659159 -182426373 + LTR7 LTR ERV1 1 448 -2 17487 96 7 22 chr5 20659161 20661732 -182423800 + HERVH LTR ERV1 1 2532 -5181 1041 169 0 0 chr5 20661724 20661902 -182423630 + HERVH LTR ERV1 2810 2987 -4726 * 913 130 20 0 chr5 20661896 20662042 -182423490 + HERVH LTR ERV1 3140 3288 -4425 * 3400 113 4 8 chr5 20662034 20662537 -182422995 + HERVH LTR ERV1 3492 3992 -3721 4520 135 0 1 chr5 20662540 20663200 -182422332 + HERVH LTR ERV1 4488 5146 -2567 1349 126 17 42 chr5 20663183 20663421 -182422111 + HERVH LTR ERV1 5588 5819 -1894 * 2396 94 53 13 chr5 20663422 20663796 -182421736 + HERVH LTR ERV1 7325 7713 0 3014 71 95 5 chr5 20663796 20664207 -182421325 + LTR7 LTR ERV1 1 448 -2 680 245 37 0 chr5 20665041 20665204 -182420328 - MIR SINE MIR -38 224 56 639 189 79 31 chr5 20666069 20666196 -182419336 + FLAM_A SINE Alu 1 133 0 252 0 0 0 chr5 20666917 20666945 -182418587 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 250 325 0 0 chr5 20667038 20667118 -182418414 - MIR SINE MIR -19 243 164 180 338 88 0 chr5 20667126 20667206 -182418326 + MIR SINE MIR 17 103 -159 875 265 111 21 chr5 20667480 20667805 -182417727 + L1MC5 LINE L1 5537 5890 -1918 23 54 0 0 chr5 20668067 20668104 -182417428 + AT_rich Low_complexity Low_complexity 1 37 0 1541 171 30 23 chr5 20668114 20668413 -182417119 + AluJb SINE Alu 1 301 -11 1960 108 90 4 chr5 20668419 20668696 -182416836 + AluSx SINE Alu 1 301 -11 2124 172 6 6 chr5 20669026 20669387 -182416145 + MLT2D LTR ERVL 1 361 -53 294 148 0 0 chr5 20669388 20669442 -182416090 + (GA)n Simple_repeat Simple_repeat 2 55 0 266 93 70 0 chr5 20669442 20669485 -182416047 + MLT2D LTR ERVL 419 464 0 252 351 92 30 chr5 20669573 20669704 -182415828 + L2 LINE L2 3128 3266 -6 207 361 37 9 chr5 20671006 20671114 -182414418 - MIR SINE MIR -149 113 3 251 232 101 0 chr5 20671115 20671184 -182414348 + L1ME LINE L1 5597 5672 -449 * 1435 209 84 134 chr5 20671177 20672230 -182413302 + L1MC5 LINE L1 6778 7765 -196 390 57 0 0 chr5 20672230 20672283 -182413249 + (TG)n Simple_repeat Simple_repeat 1 53 0 1435 209 84 134 chr5 20672283 20672437 -182413095 + L1MC5 LINE L1 7765 7925 -36 719 282 41 15 chr5 20673393 20673659 -182411873 - LTR16A LTR ERVL -5 445 173 372 267 80 17 chr5 20674225 20674401 -182411131 - HERV16 LTR ERVL -793 4971 4785 1875 112 19 0 chr5 20674414 20674682 -182410850 - AluSx SINE Alu -39 273 1 4537 118 103 78 chr5 20674777 20676215 -182409317 + pTR5 LTR ERV1 66 2438 0 870 356 6 6 chr5 20676289 20676632 -182408900 - HERV16 LTR ERVL -1114 4540 4198 1447 305 73 22 chr5 20676640 20677338 -182408194 - HERV16 LTR ERVL -2716 2280 1705 458 324 19 24 chr5 20677355 20677568 -182407964 - HERV16 LTR ERVL -3429 1567 1356 517 312 13 0 chr5 20677611 20677768 -182407764 - HERV16 LTR ERVL -3653 1343 1185 695 130 0 43 chr5 20677768 20677883 -182407649 - Tigger7 DNA MER2_type 0 2491 2382 * 3331 155 55 0 chr5 20677877 20678418 -182407114 - Tigger7 DNA MER2_type -162 571 1 1936 148 63 27 chr5 20678420 20678752 -182406780 + MER2 DNA MER2_type 1 344 0 2684 276 83 38 chr5 20678753 20679141 -182406391 - HERV16 LTR ERVL -3811 1185 816 1167 230 5 0 chr5 20679141 20679358 -182406174 - MER58A DNA MER1_type -4 220 3 2684 276 83 38 chr5 20679358 20680101 -182405431 - HERV16 LTR ERVL -4180 816 3 774 272 134 55 chr5 20680117 20680521 -182405011 - LTR16A LTR ERVL -14 436 1 374 212 10 0 chr5 20680764 20680863 -182404669 + GA-rich Low_complexity Low_complexity 4 103 0 387 0 0 0 chr5 20681681 20681724 -182403808 + (CA)n Simple_repeat Simple_repeat 2 44 0 644 272 136 17 chr5 20681984 20682285 -182403247 + MER46C DNA MER2_type 2 338 0 264 267 147 42 chr5 20682397 20682588 -182402944 - MIR SINE MIR -32 230 20 2162 214 25 23 chr5 20682703 20683218 -182402314 + Charlie1b DNA MER1_type 7 522 -1 742 270 109 0 chr5 20683218 20683429 -182402103 + MIR SINE MIR 8 241 -21 451 146 109 88 chr5 20684340 20684477 -182401055 + MIR SINE MIR 79 218 -44 805 246 218 36 chr5 20684563 20685062 -182400470 - MLT1G LTR MaLR 0 590 1 1952 120 39 0 chr5 20685228 20685511 -182400021 + AluSx SINE Alu 1 294 -18 358 266 16 14 chr5 20685889 20686026 -182399506 - MLT1J LTR MaLR -291 194 21 23 33 0 0 chr5 20686042 20686072 -182399460 + AT_rich Low_complexity Low_complexity 1 30 0 2111 104 0 0 chr5 20686636 20686904 -182398628 + AluSx SINE Alu 35 302 -10 253 197 171 13 chr5 20686939 20687015 -182398517 + MIR SINE MIR 82 169 -93 2468 75 0 0 chr5 20687314 20687619 -182397913 - AluY SINE Alu -6 305 1 478 90 0 0 chr5 20687784 20687851 -182397681 + L1MA1 LINE L1 6232 6298 -4 1769 168 3 10 chr5 20688498 20688796 -182396736 + AluJo SINE Alu 1 296 -16 234 253 259 46 chr5 20689534 20689708 -182395824 - MIR SINE MIR -18 244 34 362 226 156 52 chr5 20691245 20691457 -182394075 - MIR SINE MIR -28 234 1 245 100 20 0 chr5 20692297 20692347 -182393185 + (TA)n Simple_repeat Simple_repeat 2 52 0 1353 152 43 5 chr5 20692454 20692665 -182392867 + MER20 DNA MER1_type 1 219 0 2533 65 0 3 chr5 20692950 20693258 -182392274 + AluY SINE Alu 1 307 -4 833 224 36 18 chr5 20693396 20693615 -182391917 + MER58A DNA MER1_type 2 224 0 197 263 26 118 chr5 20693687 20693763 -182391769 + MER5A DNA MER1_type 1 69 -120 905 153 71 53 chr5 20694840 20695010 -182390522 - AluJb SINE Alu -7 305 133 257 222 181 0 chr5 20696499 20696571 -182388961 + MIR SINE MIR 63 147 -115 700 192 46 91 chr5 20697697 20697916 -182387616 + MER3 DNA MER1_type 1 209 0 2032 249 107 29 chr5 20698008 20698744 -182386788 + L1ME3A LINE L1 5288 6123 -47 1809 148 80 19 chr5 20698744 20699068 -182386464 + MER2 DNA MER2_type 1 344 0 2032 249 107 29 chr5 20699068 20699115 -182386417 + L1ME3A LINE L1 6123 6165 -5 279 233 41 41 chr5 20699182 20699255 -182386277 + MIR SINE MIR 184 256 -6 721 212 0 29 chr5 20699313 20699450 -182386082 - FLAM_A SINE Alu 0 133 1 2174 271 117 16 chr5 20699683 20700670 -182384862 - L2 LINE L2 -106 3207 2119 1627 183 39 3 chr5 20701127 20701412 -182384120 + AluJb SINE Alu 1 295 -17 1619 188 58 50 chr5 20702891 20703252 -182382280 + MLT1A1 LTR MaLR 2 365 0 269 245 53 21 chr5 20703532 20703626 -182381906 - L2 LINE L2 -4 3309 3213 933 215 88 8 chr5 20705113 20705364 -182380168 - MER33 DNA MER1_type -13 311 41 2277 84 0 7 chr5 20705419 20705718 -182379814 + AluSx SINE Alu 1 297 -15 305 300 114 64 chr5 20705858 20706202 -182379330 + L2 LINE L2 2736 3102 -211 1471 215 217 25 chr5 20706212 20706649 -182378883 - MLT1F LTR MaLR 0 542 22 435 228 0 0 chr5 20706706 20706785 -182378747 - MER81 DNA DNA -34 80 2 279 224 214 10 chr5 20706809 20706907 -182378625 + L2 LINE L2 3192 3309 -4 207 0 0 0 chr5 20707588 20707611 -182377921 + (T)n Simple_repeat Simple_repeat 1 23 0 2387 142 83 0 chr5 20708255 20708650 -182376882 + MSTA LTR MaLR 1 428 0 257 251 133 94 chr5 20709373 20709524 -182376008 + MIR SINE MIR 3 160 -48 1715 199 53 3 chr5 20709545 20709867 -182375665 - MER58B DNA MER1_type 0 341 4 395 328 23 0 chr5 20709872 20710003 -182375529 - MIR SINE MIR -66 196 63 216 135 0 0 chr5 20713402 20713439 -182372093 + (T)n Simple_repeat Simple_repeat 1 37 0 383 331 55 44 chr5 20714840 20715021 -182370511 - MIR3 SINE MIR -23 185 3 3127 66 37 12 chr5 20715262 20715669 -182369863 + L1PA11 LINE L1 5758 6174 0 2141 174 63 10 chr5 20715935 20716350 -182369182 - L1MB7 LINE L1 0 6184 5748 1093 161 22 0 chr5 20717044 20717224 -182368308 + MER5A DNA MER1_type 2 185 -4 288 264 208 0 chr5 20718168 20718293 -182367239 + MIR SINE MIR 80 230 -32 563 271 0 12 chr5 20718697 20718722 -182366810 - L1MA10 LINE L1 -3 6331 6307 2551 216 78 45 chr5 20718722 20719426 -182366106 - L1ME1 LINE L1 -19 6147 5421 348 352 164 30 chr5 20722279 20722682 -182362850 - L2 LINE L2 -9 3263 2807 280 208 59 79 chr5 20723120 20723221 -182362311 - L2 LINE L2 0 3313 3215 22 0 0 0 chr5 20723433 20723455 -182362077 + AT_rich Low_complexity Low_complexity 1 22 0 559 123 0 0 chr5 20724133 20724206 -182361326 - AluJ/FLAM SINE Alu -233 79 7 279 312 172 19 chr5 20725219 20725376 -182360156 - MIR3 SINE MIR -5 203 23 333 239 84 35 chr5 20726724 20726866 -182358666 - MER5A DNA MER1_type -40 149 1 2210 220 70 42 chr5 20726924 20727546 -182357986 + L1MEc LINE L1 35 679 -5717 2391 91 0 3 chr5 20727546 20727855 -182357677 + AluSc SINE Alu 1 308 -1 2210 220 70 42 chr5 20727855 20727899 -182357633 + L1MEc LINE L1 679 720 -5676 23 0 0 0 chr5 20728714 20728737 -182356795 + AT_rich Low_complexity Low_complexity 1 23 0 420 251 0 26 chr5 20729322 20729443 -182356089 - MIR SINE MIR -69 193 77 227 286 0 0 chr5 20729815 20729864 -182355668 - L2 LINE L2 -14 3258 3210 201 304 179 0 chr5 20730085 20730197 -182355335 + L2 LINE L2 3178 3309 -4 826 182 0 0 chr5 20730480 20730612 -182354920 + FLAM_C SINE Alu 1 132 -1 333 0 0 0 chr5 20730938 20730975 -182354557 + (TC)n Simple_repeat Simple_repeat 1 37 0 189 0 0 0 chr5 20730974 20730995 -182354537 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 21 0 0 0 chr5 20732984 20733005 -182352527 + AT_rich Low_complexity Low_complexity 1 21 0 2909 103 31 10 chr5 20733085 20733502 -182352030 + MSTA LTR MaLR 1 426 -2 4951 161 41 11 chr5 20733504 20734365 -182351167 + MSTA-int LTR MaLR 1 887 -764 1575 74 0 0 chr5 20734365 20734555 -182350977 + AluY SINE Alu 104 293 -18 1235 273 84 18 chr5 20734978 20735417 -182350115 - MLT1J LTR MaLR -43 468 1 806 196 116 6 chr5 20735560 20735733 -182349799 - MER58A DNA MER1_type -23 201 10 445 254 95 0 chr5 20735845 20735971 -182349561 - MIR SINE MIR -12 250 113 290 221 90 41 chr5 20736465 20736587 -182348945 - MER117 DNA MER1_type -51 146 19 4257 119 53 25 chr5 20736888 20737173 -182348359 - Tigger3(Golem) DNA MER2_type 0 3029 2754 2089 132 3 0 chr5 20737173 20737469 -182348063 + AluJb SINE Alu 1 297 -15 4257 119 53 25 chr5 20737469 20737913 -182347619 - Tigger3(Golem) DNA MER2_type -275 2754 2279 467 202 149 0 chr5 20737905 20737999 -182347533 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 724 260 20 59 chr5 20739858 20740112 -182345420 - MIR SINE MIR -5 257 14 2050 133 0 7 chr5 20740264 20740587 -182344945 - AluSx SINE Alu 0 321 1 24 32 0 0 chr5 20740665 20740696 -182344836 + AT_rich Low_complexity Low_complexity 1 31 0 2488 64 0 7 chr5 20740702 20741000 -182344532 - AluY SINE Alu -15 296 1 460 250 72 7 chr5 20741030 20741182 -182344350 + MLT1H1 LTR MaLR 2 163 -392 233 248 138 18 chr5 20741206 20741315 -182344217 + L1ME LINE L1 5785 5906 -215 2298 88 16 7 chr5 20742130 20742435 -182343097 + AluSg1 SINE Alu 1 308 -1 2933 80 8 0 chr5 20742637 20743000 -182342532 - L1PA10 LINE L1 -4 6164 5799 253 357 0 0 chr5 20743360 20743458 -182342074 - MIR SINE MIR -1 261 164 180 338 88 0 chr5 20743466 20743546 -182341986 + MIR SINE MIR 17 103 -159 866 268 111 21 chr5 20743820 20744145 -182341387 + L1MC4a LINE L1 5537 5890 -1918 23 54 0 0 chr5 20744407 20744444 -182341088 + AT_rich Low_complexity Low_complexity 1 37 0 888 172 30 86 chr5 20744454 20744722 -182340810 + AluJo SINE Alu 1 253 -59 180 0 0 0 chr5 20744763 20744783 -182340749 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 194 234 181 21 chr5 20746351 20746445 -182339087 + L2 LINE L2 3136 3244 -28 817 149 32 4 chr5 20747394 20747616 -182337916 - AluJb SINE Alu -1 311 2 1832 144 9 41 chr5 20750648 20750968 -182334564 + AluJb SINE Alu 2 311 -1 2220 114 0 40 chr5 20751440 20751765 -182333767 + AluSx SINE Alu 1 312 0 2457 204 2 2 chr5 20752038 20752454 -182333078 + MER47B DNA MER2_type 1 416 -2 1880 143 199 6 chr5 20752565 20752922 -182332610 - MSTB LTR MaLR 0 426 1 367 240 31 21 chr5 20753696 20753792 -182331740 + MLT1J LTR MaLR 82 178 -333 1056 212 25 17 chr5 20753808 20754049 -182331483 + MER57-int LTR ERV1 4 246 -7291 572 163 54 16 chr5 20754693 20754822 -182330710 + MER57-int LTR ERV1 302 435 -4501 2951 87 3 0 chr5 20755469 20755838 -182329694 - L1PB1 LINE L1 0 6151 5782 300 97 48 0 chr5 20755838 20755900 -182329632 + (TA)n Simple_repeat Simple_repeat 2 66 0 2085 81 0 0 chr5 20755902 20756173 -182329359 - L1PB1 LINE L1 -360 5791 5521 438 304 22 27 chr5 20757334 20757518 -182328014 + MER5A DNA MER1_type 1 183 -6 804 191 0 7 chr5 20757754 20757895 -182327637 + FLAM_C SINE Alu 2 141 -2 186 266 138 75 chr5 20758253 20758347 -182327185 + L2 LINE L2 3127 3226 -46 274 217 89 72 chr5 20758617 20758797 -182326735 - Charlie7 DNA MER1_type -9 2603 2421 279 240 146 0 chr5 20758797 20758893 -182326639 + L1MC/D LINE L1 5714 5823 -1985 330 189 25 8 chr5 20758983 20759230 -182326302 + (TA)n Simple_repeat Simple_repeat 1 251 0 275 250 62 0 chr5 20759260 20759356 -182326176 + GA-rich Low_complexity Low_complexity 3 104 0 180 264 0 57 chr5 20759655 20759708 -182325824 - L2 LINE L2 -80 3192 3143 2217 99 0 3 chr5 20761241 20761563 -182323969 - AluSg SINE Alu 0 310 1 245 130 0 0 chr5 20761600 20761646 -182323886 - MADE1 DNA Mariner 0 80 35 25 0 0 0 chr5 20761646 20761671 -182323861 + AT_rich Low_complexity Low_complexity 1 25 0 1707 191 33 3 chr5 20763657 20763960 -182321572 + AluJo SINE Alu 1 312 0 204 200 0 0 chr5 20763960 20764005 -182321527 + GA-rich Low_complexity Low_complexity 2 46 0 1596 233 76 42 chr5 20764007 20764557 -182320975 - L1MD3 LINE L1 -23 7972 7404 348 204 0 139 chr5 20764557 20764665 -182320867 - MLT1F1 LTR MaLR -442 125 33 362 187 73 107 chr5 20764684 20764834 -182320698 - L1MD3 LINE L1 -903 7092 6948 322 247 138 122 chr5 20765800 20766335 -182319197 - L1M2 LINE L1 -5452 1397 773 1758 187 42 79 chr5 20766696 20767124 -182318408 - MLT2D LTR ERVL -2 412 1 193 200 17 33 chr5 20767636 20767696 -182317836 - MIR SINE MIR -26 236 178 947 291 140 6 chr5 20767798 20768162 -182317370 + LTR16A LTR ERVL 26 438 -12 416 223 11 0 chr5 20768184 20768278 -182317254 - MIR SINE MIR -156 106 12 2564 68 0 0 chr5 20768788 20769096 -182316436 - AluY SINE Alu -3 308 1 618 254 14 0 chr5 20769747 20769889 -182315643 - MER58B DNA MER1_type 0 341 198 21 36 0 0 chr5 20770231 20770259 -182315273 + AT_rich Low_complexity Low_complexity 1 28 0 338 191 169 0 chr5 20771042 20771131 -182314401 + LTR16A LTR ERVL 342 445 -5 681 223 32 27 chr5 20771289 20771477 -182314055 + MIR SINE MIR 27 215 -47 2111 102 39 0 chr5 20771578 20771862 -182313670 + AluSx SINE Alu 1 295 -17 210 222 16 32 chr5 20771953 20772016 -182313516 + GA-rich Low_complexity Low_complexity 3 64 0 341 268 134 30 chr5 20772108 20772272 -182313260 - MIR SINE MIR -22 240 60 193 330 128 34 chr5 20772368 20772547 -182312985 - L2 LINE L2 -4 3268 3073 2042 87 0 4 chr5 20773231 20773485 -182312047 + AluSg SINE Alu 1 253 -57 2483 48 10 0 chr5 20774038 20774329 -182311203 - AluY SINE Alu -17 294 1 773 300 185 13 chr5 20774637 20775091 -182310441 - LTR67 LTR ERVL -10 547 16 528 168 72 32 chr5 20775154 20775279 -182310253 + FLAM_C SINE Alu 1 130 -3 414 285 31 15 chr5 20775864 20775994 -182309538 - L2 LINE L2 0 3272 3141 183 343 85 20 chr5 20778113 20778314 -182307218 - MIR SINE MIR -20 242 29 1435 127 5 0 chr5 20778486 20778683 -182306849 + AluSg/x SINE Alu 85 282 -30 297 243 135 9 chr5 20778939 20779050 -182306482 - MIR3 SINE MIR -1 207 83 346 309 8 0 chr5 20779430 20779553 -182305979 - MIR SINE MIR -29 233 110 2310 67 0 7 chr5 20779680 20779964 -182305568 - AluY SINE Alu -2 309 28 820 187 19 16 chr5 20782088 20782334 -182303198 + MLT1A1 LTR MaLR 1 365 0 2155 125 3 0 chr5 20782400 20782704 -182302828 + AluSg SINE Alu 6 310 0 628 43 22 11 chr5 20782716 20782808 -182302724 + (GGAA)n Simple_repeat Simple_repeat 2 94 0 293 310 23 0 chr5 20783008 20783067 -182302465 - L1MA10 LINE L1 -7 6327 6269 356 238 50 44 chr5 20783067 20783227 -182302305 - L1ME2 LINE L1 -57 6107 5947 3116 205 72 38 chr5 20783819 20784380 -182301152 - L1ME1 LINE L1 -5 6161 5621 2276 107 0 0 chr5 20784380 20784678 -182300854 + AluSx SINE Alu 1 298 -14 3116 205 72 38 chr5 20784678 20784957 -182300575 - L1ME1 LINE L1 -545 5621 5353 2321 108 0 0 chr5 20784957 20785262 -182300270 - AluSq SINE Alu -8 305 1 3116 205 72 38 chr5 20785262 20785804 -182299728 - L1ME1 LINE L1 -813 5353 4739 433 256 33 0 chr5 20786415 20786536 -182298996 + MIR SINE MIR 117 241 -21 198 0 0 0 chr5 20786562 20786584 -182298948 + (CAG)n Simple_repeat Simple_repeat 2 23 0 1710 185 3 3 chr5 20787151 20787454 -182298078 - AluJo SINE Alu -9 303 1 279 223 202 0 chr5 20789450 20789544 -182295988 + MLT1I LTR MaLR 281 393 -16 574 152 43 0 chr5 20789820 20789912 -182295620 + MLT1A2 LTR MaLR 277 372 -2 22 0 0 0 chr5 20791252 20791274 -182294258 + AT_rich Low_complexity Low_complexity 1 22 0 2015 178 123 5 chr5 20791676 20792092 -182293440 + L1MB5 LINE L1 5710 6174 0 1567 189 173 16 chr5 20792705 20793139 -182292393 - MLT1D LTR MaLR -3 502 1 435 272 34 28 chr5 20794174 20794387 -182291145 + L1ME4a LINE L1 5734 5949 -213 289 248 15 22 chr5 20794397 20794534 -182290998 + (TA)n Simple_repeat Simple_repeat 2 137 0 302 225 50 0 chr5 20795686 20795766 -182289766 - L1ME2 LINE L1 -246 5875 5792 483 298 93 54 chr5 20795842 20796141 -182289391 + L2 LINE L2 2912 3231 -82 2044 138 3 3 chr5 20796141 20796438 -182289094 - AluSx SINE Alu -15 297 1 483 298 93 54 chr5 20796438 20796524 -182289008 + L2 LINE L2 3231 3312 -1 354 243 46 33 chr5 20796553 20796705 -182288827 + L1ME4a LINE L1 5967 6120 -1 21 36 0 0 chr5 20796883 20796911 -182288621 + AT_rich Low_complexity Low_complexity 1 28 0 2390 60 10 17 chr5 20797140 20797440 -182288092 - AluY SINE Alu -7 304 7 21 36 0 0 chr5 20797552 20797580 -182287952 + AT_rich Low_complexity Low_complexity 1 28 0 2228 108 0 0 chr5 20797821 20798116 -182287416 - AluSx SINE Alu -17 295 1 693 201 136 0 chr5 20798838 20799007 -182286525 + MSTD LTR MaLR 1 192 -204 301 241 0 0 chr5 20799007 20799090 -182286442 + A-rich Low_complexity Low_complexity 1 83 0 1010 188 0 11 chr5 20799099 20799275 -182286257 + FRAM SINE Alu 1 173 -3 1104 195 39 0 chr5 20799275 20799480 -182286052 + MSTD LTR MaLR 184 396 0 2429 70 0 0 chr5 20802203 20802538 -182282994 + AluY SINE Alu 2 336 0 2421 88 3 3 chr5 20803020 20803328 -182282204 + AluSp SINE Alu 2 309 -4 2385 153 102 40 chr5 20803548 20804066 -182281466 + L1MC3 LINE L1 7218 7767 -18 1826 168 0 7 chr5 20804242 20804546 -182280986 - AluJo SINE Alu -10 302 1 261 312 73 46 chr5 20806951 20807169 -182278363 - L2 LINE L2 -4 3268 3045 206 206 0 0 chr5 20807354 20807388 -182278144 + (CA)n Simple_repeat Simple_repeat 2 35 0 1860 169 3 13 chr5 20808660 20808974 -182276558 + AluJo SINE Alu 1 311 -1 2278 103 0 17 chr5 20809260 20809562 -182275970 - AluSx SINE Alu -15 297 1 904 157 35 50 chr5 20809621 20809819 -182275713 + L1MB1 LINE L1 5942 6136 -32 210 71 0 0 chr5 20810266 20810294 -182275238 + (T)n Simple_repeat Simple_repeat 1 28 0 1582 251 75 19 chr5 20810651 20811129 -182274403 + MLT1D LTR MaLR 1 505 0 22 80 0 0 chr5 20812533 20812583 -182272949 + AT_rich Low_complexity Low_complexity 1 50 0 2277 107 0 0 chr5 20813200 20813498 -182272034 - AluSx SINE Alu -13 299 2 2533 75 3 0 chr5 20813889 20814196 -182271336 + AluSc SINE Alu 1 308 -1 2328 111 0 6 chr5 20814720 20815035 -182270497 - AluSq SINE Alu 0 313 1 208 134 15 149 chr5 20815644 20815711 -182269821 + MER5A DNA MER1_type 47 104 -85 237 204 20 0 chr5 20815733 20815782 -182269750 - L2 LINE L2 -7 3306 3257 393 296 75 0 chr5 20816126 20816285 -182269247 + MER112 DNA MER1_type 74 244 -16 814 227 85 71 chr5 20817075 20817270 -182268262 - L1MC5 LINE L1 -51 7910 7719 2305 93 0 43 chr5 20817270 20817458 -182268074 - AluSc SINE Alu 0 309 114 197 33 33 0 chr5 20817458 20817488 -182268044 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2359 60 14 0 chr5 20817488 20817770 -182267762 - AluSp SINE Alu -27 286 1 2305 93 0 43 chr5 20817770 20817903 -182267629 - AluSc SINE Alu -193 116 1 814 227 85 71 chr5 20817903 20818022 -182267510 - L1MC5 LINE L1 -242 7719 7603 213 39 0 0 chr5 20818022 20818048 -182267484 + (CA)n Simple_repeat Simple_repeat 1 26 0 814 227 85 71 chr5 20818048 20818631 -182266901 - L1MC5 LINE L1 -358 7603 6985 2261 127 30 25 chr5 20818631 20818992 -182266540 + THE1B LTR MaLR 1 363 -1 814 227 85 71 chr5 20818992 20819141 -182266391 - L1MC5 LINE L1 -976 6985 6840 484 236 139 6 chr5 20819554 20819719 -182265813 - L3 LINE CR1 -7 1570 1384 469 309 115 20 chr5 20819760 20820055 -182265477 - L2 LINE L2 -37 3235 2913 643 240 110 0 chr5 20820177 20820377 -182265155 - MIR SINE MIR -37 225 4 2827 143 22 0 chr5 20820497 20820951 -182264581 - L1MC2 LINE L1 -234 6110 5647 276 293 219 30 chr5 20820967 20821390 -182264142 - L3 LINE CR1 -608 969 423 1484 245 59 64 chr5 20821847 20822423 -182263109 - MER45C DNA AcHobo -378 575 3 400 18 35 0 chr5 20822510 20822567 -182262965 + (CA)n Simple_repeat Simple_repeat 2 60 0 180 0 0 0 chr5 20822824 20822844 -182262688 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1087 40 0 0 chr5 20822845 20822969 -182262563 - L1PA10 LINE L1 -20 6148 6025 189 237 0 0 chr5 20823278 20823316 -182262216 - L3 LINE CR1 -615 962 925 23 33 0 0 chr5 20823634 20823664 -182261868 + AT_rich Low_complexity Low_complexity 1 30 0 1565 150 0 41 chr5 20824189 20824483 -182261049 + AluSx SINE Alu 3 284 -28 24 67 0 0 chr5 20824483 20824528 -182261004 + AT_rich Low_complexity Low_complexity 1 45 0 2533 76 15 6 chr5 20824944 20825285 -182260247 + L1PB1 LINE L1 5807 6150 -1 210 281 62 0 chr5 20825303 20825367 -182260165 - MIR3 SINE MIR -1 207 140 23 68 0 0 chr5 20825381 20825425 -182260107 + AT_rich Low_complexity Low_complexity 1 44 0 279 237 52 10 chr5 20825721 20825818 -182259714 - MER104 DNA Tc2 -45 135 35 2280 161 59 5 chr5 20826602 20827007 -182258525 - MSTA LTR MaLR -1 427 1 275 322 23 11 chr5 20827484 20827571 -182257961 + MER5A DNA MER1_type 56 143 -46 191 286 0 18 chr5 20827589 20827645 -182257887 + MIR3 SINE MIR 151 205 -3 2000 158 33 19 chr5 20827738 20828098 -182257434 - MLT1A1 LTR MaLR 0 365 1 1948 191 31 13 chr5 20829103 20829486 -182256046 - MLT1B LTR MaLR 0 390 1 1768 116 54 4 chr5 20830354 20830657 -182254875 - AluSx SINE Alu 0 312 1 257 257 27 27 chr5 20831656 20831730 -182253802 - MIR SINE MIR -112 150 77 602 202 6 0 chr5 20831770 20831948 -182253584 + (CA)n Simple_repeat Simple_repeat 2 180 0 5194 132 11 5 chr5 20833207 20834012 -182251520 + L1PA14 LINE L1 5311 6120 -41 374 266 32 24 chr5 20834296 20834420 -182251112 + L2 LINE L2 3136 3260 -12 1937 122 17 3 chr5 20835435 20835729 -182249803 + AluSx SINE Alu 5 302 -10 262 229 0 0 chr5 20837066 20837114 -182248418 + MIR3 SINE MIR 112 159 -49 448 280 70 42 chr5 20838098 20838347 -182247185 + MIR SINE MIR 3 256 -6 557 271 133 57 chr5 20839014 20839434 -182246098 + L2 LINE L2 2816 3267 -5 208 272 97 29 chr5 20839464 20839567 -182245965 + L2 LINE L2 2925 3034 -238 1309 174 15 104 chr5 20839885 20840212 -182245320 + AluJb SINE Alu 1 298 -4 231 291 181 16 chr5 20840576 20840703 -182244829 - L2 LINE L2 -1 3271 3124 1901 282 133 40 chr5 20840703 20841025 -182244507 + HAL1 LINE L1 16 307 -2200 1966 98 0 0 chr5 20841025 20841290 -182244242 - AluSx SINE Alu -47 265 1 1901 282 133 40 chr5 20841290 20842074 -182243458 + HAL1 LINE L1 307 1017 -1490 1346 185 86 20 chr5 20842074 20842366 -182243166 + AluJo SINE Alu 1 311 -1 1901 282 133 40 chr5 20842366 20842379 -182243153 + HAL1 LINE L1 1017 1027 -1480 2322 97 3 0 chr5 20842379 20842688 -182242844 - AluSx SINE Alu -2 310 1 1901 282 133 40 chr5 20842688 20843196 -182242336 + HAL1 LINE L1 1027 1797 -710 427 213 184 7 chr5 20843502 20843643 -182241889 + HAL1 LINE L1 2057 2222 -285 2059 94 3 3 chr5 20843718 20844027 -182241505 + AluSp SINE Alu 1 309 0 326 257 122 8 chr5 20845218 20845366 -182240166 + MIR SINE MIR 29 192 -62 1356 193 8 89 chr5 20846601 20846995 -182238537 - MLT1A1 LTR MaLR -3 362 1 1434 291 36 16 chr5 20847928 20848368 -182237164 + L2 LINE L2 2852 3300 -13 1777 118 0 11 chr5 20848398 20848660 -182236872 + AluSx SINE Alu 45 303 -9 1176 133 6 0 chr5 20849029 20849209 -182236323 - AluSq SINE Alu -132 181 1 1883 126 3 7 chr5 20849446 20849732 -182235800 + AluSx SINE Alu 1 285 -27 318 272 22 22 chr5 20849734 20849826 -182235706 - L1MC4 LINE L1 -1338 6704 6613 183 204 0 0 chr5 20849827 20849871 -182235661 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 23 33 0 0 chr5 20850307 20850337 -182235195 + AT_rich Low_complexity Low_complexity 1 30 0 2856 91 3 0 chr5 20850469 20850832 -182234700 + THE1B LTR MaLR 1 364 0 1967 124 0 3 chr5 20851419 20851709 -182233823 + AluSg SINE Alu 1 289 -21 790 144 50 29 chr5 20851714 20851853 -182233679 + FLAM_C SINE Alu 2 143 0 27 29 0 0 chr5 20852233 20852267 -182233265 + AT_rich Low_complexity Low_complexity 1 34 0 2382 67 0 0 chr5 20852401 20852699 -182232833 - AluY SINE Alu -13 298 1 2103 100 4 0 chr5 20852763 20853044 -182232488 - AluSp SINE Alu -31 282 1 22 0 0 0 chr5 20853334 20853356 -182232176 + AT_rich Low_complexity Low_complexity 1 22 0 445 264 154 55 chr5 20854181 20854595 -182230937 - L1 LINE L1 -1219 3307 2935 219 36 0 0 chr5 20854595 20854623 -182230909 + (TCCCC)n Simple_repeat Simple_repeat 4 31 0 1868 126 20 3 chr5 20854629 20854931 -182230601 - AluSx SINE Alu -5 307 1 445 264 154 55 chr5 20854931 20854942 -182230590 - L1 LINE L1 -1595 2931 876 582 260 105 0 chr5 20855758 20855939 -182229593 - MER3 DNA MER1_type -9 200 1 340 246 68 34 chr5 20855945 20856063 -182229469 + MIR SINE MIR 85 206 -56 638 206 50 22 chr5 20856661 20856841 -182228691 - MER5A DNA MER1_type -1 188 4 7227 44 14 2 chr5 20857200 20858158 -182227374 + L1PA5 LINE L1 5185 6152 -2 1198 249 57 48 chr5 20858327 20858566 -182226966 + L1ME2 LINE L1 5662 5898 -266 1938 98 0 0 chr5 20858566 20858830 -182226702 + AluSx SINE Alu 35 298 -14 1198 249 57 48 chr5 20858830 20859068 -182226464 + L1ME2 LINE L1 5898 6143 -21 29 0 0 0 chr5 20859262 20859291 -182226241 + AT_rich Low_complexity Low_complexity 1 29 0 386 257 88 41 chr5 20859665 20859836 -182225696 - L1ME3A LINE L1 -249 5921 5743 1366 249 63 34 chr5 20861033 20861592 -182223940 + L1MC4a LINE L1 5254 5828 -1980 25 51 0 0 chr5 20861824 20861863 -182223669 + AT_rich Low_complexity Low_complexity 1 39 0 2508 48 0 10 chr5 20861868 20862181 -182223351 + AluY SINE Alu 1 310 -1 21 0 0 0 chr5 20863337 20863358 -182222174 + GC_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 20863523 20863549 -182221983 + GC_rich Low_complexity Low_complexity 1 26 0 243 250 11 22 chr5 20863742 20863834 -182221698 + G-rich Low_complexity Low_complexity 5 95 0 21 0 0 0 chr5 20863931 20863952 -182221580 + GC_rich Low_complexity Low_complexity 1 21 0 385 183 14 35 chr5 20864420 20864562 -182220970 + CT-rich Low_complexity Low_complexity 1 139 0 292 227 19 63 chr5 20865035 20865168 -182220364 + L1ME3 LINE L1 6038 6166 -4 191 254 34 34 chr5 20865185 20865244 -182220288 - L2 LINE L2 -14 3258 3200 2120 116 73 14 chr5 20866959 20867313 -182218219 + THE1C LTR MaLR 1 375 0 191 242 0 65 chr5 20867571 20867633 -182217899 + L2 LINE L2 3208 3265 -7 275 331 106 7 chr5 20868518 20868660 -182216872 - L2 LINE L2 -895 2419 2264 1606 129 121 4 chr5 20869465 20869729 -182215803 + AluJb SINE Alu 1 295 -17 743 100 0 0 chr5 20869762 20869862 -182215670 - HY1 scRNA scRNA -12 100 1 2337 183 16 56 chr5 20869862 20870326 -182215206 + LTR54 LTR ERV1 18 461 -49 2563 60 0 10 chr5 20870326 20870640 -182214892 - AluY SINE Alu 0 311 1 2337 183 16 56 chr5 20870640 20870689 -182214843 + LTR54 LTR ERV1 461 510 0 910 257 75 12 chr5 20870710 20870963 -182214569 - MER21B LTR ERV1 -57 806 538 525 131 0 0 chr5 20870975 20871059 -182214473 + (CA)n Simple_repeat Simple_repeat 2 85 0 1635 184 4 0 chr5 20871059 20871337 -182214195 - AluJo SINE Alu -33 279 1 1777 194 23 127 chr5 20871340 20871947 -182213585 - MER21B LTR ERV1 -319 544 1 477 236 9 9 chr5 20872687 20872793 -182212739 - MER94 DNA DNA -20 114 9 303 233 0 33 chr5 20873382 20873472 -182212060 + HsTC2 DNA Tc2 1 87 -1811 1819 298 125 38 chr5 20874372 20874733 -182210799 + L1MC4 LINE L1 6707 7035 -1007 1471 158 0 0 chr5 20874733 20874948 -182210584 + AluJb SINE Alu 83 297 -15 1819 298 125 38 chr5 20874948 20875353 -182210179 + L1MC4 LINE L1 7035 7403 -639 1989 140 3 3 chr5 20875353 20875653 -182209879 - AluSq SINE Alu -13 300 1 1938 129 61 0 chr5 20875653 20875932 -182209600 - AluSx SINE Alu -16 296 1 1819 298 125 38 chr5 20875932 20876263 -182209269 + L1MC4 LINE L1 7682 7926 -116 423 0 0 0 chr5 20876263 20876310 -182209222 + (TG)n Simple_repeat Simple_repeat 2 48 0 1819 298 125 38 chr5 20876310 20876438 -182209094 + L1MC4 LINE L1 7926 8041 -1 357 197 0 0 chr5 20876711 20876777 -182208755 - AluS SINE Alu -7 294 229 1398 106 0 15 chr5 20876844 20877042 -182208490 - AluSx SINE Alu -117 195 1 183 319 28 14 chr5 20877166 20877238 -182208294 - L2 LINE L2 -14 3258 3186 270 362 91 26 chr5 20877436 20877931 -182207601 - L2 LINE L2 -346 2968 2421 1633 179 68 70 chr5 20877931 20877978 -182207554 - MLT2D LTR ERVL 0 414 368 402 21 0 0 chr5 20877978 20878025 -182207507 + (TG)n Simple_repeat Simple_repeat 1 47 0 1633 179 68 70 chr5 20878025 20878391 -182207141 - MLT2D LTR ERVL -46 368 2 270 362 91 26 chr5 20878391 20878536 -182206996 - L2 LINE L2 -893 2421 2287 249 177 108 54 chr5 20878631 20878761 -182206771 - MLT1F LTR MaLR -217 325 189 2307 103 0 3 chr5 20878918 20879230 -182206302 + AluY SINE Alu 1 311 0 8493 32 5 11 chr5 20879387 20881159 -182204373 - L1PA4 LINE L1 -18 6137 4367 264 217 62 108 chr5 20881283 20881327 -182204205 + L2 LINE L2 3190 3234 -79 1731 138 24 3 chr5 20881327 20881616 -182203916 - AluSx SINE Alu -16 296 2 264 217 62 108 chr5 20881616 20881700 -182203832 + L2 LINE L2 3234 3312 -1 270 255 54 34 chr5 20881728 20881877 -182203655 + L1ME4a LINE L1 5968 6119 -2 558 285 29 7 chr5 20882381 20882518 -182203014 - MER21B LTR ERV1 -186 677 538 750 154 0 0 chr5 20882530 20882660 -182202872 + (CA)n Simple_repeat Simple_repeat 2 131 0 1635 184 4 0 chr5 20882660 20882938 -182202594 - AluJo SINE Alu -33 279 1 1777 194 23 127 chr5 20882941 20883548 -182201984 - MER21B LTR ERV1 -319 544 1 477 236 9 9 chr5 20884287 20884393 -182201139 - MER94 DNA DNA -20 114 9 303 233 0 33 chr5 20884982 20885072 -182200460 + HsTC2 DNA Tc2 1 87 -1811 1796 296 124 40 chr5 20885970 20886330 -182199202 + L1MC4 LINE L1 6707 7035 -1007 1479 157 0 0 chr5 20886330 20886546 -182198986 + AluJb SINE Alu 83 298 -14 1796 296 124 40 chr5 20886546 20886951 -182198581 + L1MC4 LINE L1 7035 7404 -638 2035 139 0 3 chr5 20886951 20887252 -182198280 - AluSq SINE Alu -13 300 1 1906 134 60 0 chr5 20887252 20887534 -182197998 - AluSx SINE Alu -12 300 1 1796 296 124 40 chr5 20887534 20887865 -182197667 + L1MC4 LINE L1 7404 7706 -336 477 0 0 0 chr5 20887865 20887918 -182197614 + (TG)n Simple_repeat Simple_repeat 2 54 0 1796 296 124 40 chr5 20887918 20888050 -182197482 + L1MC4 LINE L1 7706 8042 0 2209 124 0 0 chr5 20888322 20888621 -182196911 - AluSx SINE Alu -13 299 1 183 319 28 14 chr5 20888745 20888817 -182196715 - L2 LINE L2 -14 3258 3186 277 362 91 26 chr5 20889015 20889510 -182196022 - L2 LINE L2 -346 2968 2421 1624 181 68 70 chr5 20889510 20889557 -182195975 - MLT2D LTR ERVL 0 414 368 315 0 0 0 chr5 20889557 20889592 -182195940 + (TG)n Simple_repeat Simple_repeat 1 35 0 1624 181 68 70 chr5 20889592 20889958 -182195574 - MLT2D LTR ERVL -46 368 2 277 362 91 26 chr5 20889958 20890103 -182195429 - L2 LINE L2 -893 2421 2287 249 177 108 54 chr5 20890198 20890328 -182195204 - MLT1F LTR MaLR -217 325 189 2351 93 0 3 chr5 20890485 20890797 -182194735 + AluY SINE Alu 1 311 0 3361 52 7 5 chr5 20890960 20891382 -182194150 - L1PA4 LINE L1 -18 6137 5715 1038 198 40 12 chr5 20891415 20891663 -182193869 + MER39 LTR ERV1 393 647 -60 21532 45 12 5 chr5 20891663 20894340 -182191192 - L1P LINE L1 -2762 3384 687 227 127 0 73 chr5 20894539 20894594 -182190938 + Alu SINE Alu 2 52 -249 1053 81 6 43 chr5 20894718 20894879 -182190653 + AluSq SINE Alu 140 294 -19 2513 67 0 0 chr5 20894930 20895228 -182190304 + AluY SINE Alu 1 298 -13 27 29 0 0 chr5 20895362 20895396 -182190136 + AT_rich Low_complexity Low_complexity 1 34 0 806 142 58 0 chr5 20895796 20895916 -182189616 - FLAM_C SINE Alu -16 127 1 2113 117 0 3 chr5 20895920 20896210 -182189322 - AluSg SINE Alu -21 289 1 2012 164 0 0 chr5 20896885 20897189 -182188343 - AluSx SINE Alu -8 304 1 24 0 0 0 chr5 20898057 20898081 -182187451 + AT_rich Low_complexity Low_complexity 1 24 0 2438 80 0 3 chr5 20898158 20898459 -182187073 - AluSq SINE Alu -13 300 1 2349 109 0 0 chr5 20900336 20900638 -182184894 - AluSx SINE Alu -10 302 1 301 253 163 11 chr5 20901431 20901621 -182183911 - L2 LINE L2 -117 3196 2978 936 202 62 5 chr5 20902633 20902841 -182182691 + MER58A DNA MER1_type 2 221 -3 2324 93 27 0 chr5 20903147 20903448 -182182084 + AluSc SINE Alu 1 309 0 586 205 105 53 chr5 20903453 20903643 -182181889 + L1MC5 LINE L1 7711 7910 -51 393 296 75 0 chr5 20904433 20904592 -182180940 - MER112 DNA MER1_type -16 244 74 237 204 20 0 chr5 20904936 20904985 -182180547 + L2 LINE L2 3257 3306 -7 208 134 15 149 chr5 20905007 20905074 -182180458 - MER5A DNA MER1_type -85 104 47 186 329 25 51 chr5 20905452 20905610 -182179922 + L2 LINE L2 2809 2962 -310 2364 105 0 6 chr5 20905684 20905997 -182179535 + AluSq SINE Alu 1 311 -2 2525 75 3 0 chr5 20906522 20906828 -182178704 - AluSc SINE Alu -2 307 1 2234 112 0 0 chr5 20907219 20907514 -182178018 + AluSx SINE Alu 2 296 -16 7539 32 8 4 chr5 20907803 20909243 -182176289 + L1PA4 LINE L1 4695 6155 0 2298 103 0 3 chr5 20909945 20910245 -182175287 + AluSx SINE Alu 1 299 -13 322 298 181 23 chr5 20910256 20910555 -182174977 + L2 LINE L2 2967 3312 -1 1817 167 24 3 chr5 20910944 20911237 -182174295 - AluJo SINE Alu -13 299 1 27237 50 9 5 chr5 20911291 20914660 -182170872 + L1P LINE L1 1 3384 -2762 271 181 23 98 chr5 20914660 20914793 -182170739 - MER39 LTR ERV1 -60 647 525 3219 52 24 9 chr5 20915003 20915425 -182170107 + L1PA5 LINE L1 5725 6152 -2 1193 245 57 49 chr5 20915593 20915832 -182169700 + L1ME2 LINE L1 5662 5897 -267 2059 98 0 0 chr5 20915832 20916097 -182169435 + AluSx SINE Alu 35 299 -13 1193 245 57 49 chr5 20916097 20916327 -182169205 + L1ME2 LINE L1 5897 6135 -29 29 0 0 0 chr5 20916529 20916558 -182168974 + AT_rich Low_complexity Low_complexity 1 29 0 402 257 88 41 chr5 20916933 20917104 -182168428 - L1ME3A LINE L1 -249 5921 5743 1068 180 0 0 chr5 20917919 20918091 -182167441 - FAM SINE Alu -3 172 1 1794 174 11 0 chr5 20918093 20918380 -182167152 - AluJb SINE Alu -22 290 1 2271 90 24 0 chr5 20918391 20918679 -182166853 - AluY SINE Alu -16 295 1 2255 124 0 0 chr5 20918695 20918993 -182166539 - AluSx SINE Alu -14 298 1 2441 92 0 0 chr5 20919842 20920145 -182165387 - AluSc SINE Alu -6 303 1 1279 191 68 18 chr5 20920167 20920445 -182165087 - AluJo SINE Alu -20 292 1 384 22 0 0 chr5 20920850 20920895 -182164637 + (TG)n Simple_repeat Simple_repeat 2 46 0 471 206 84 8 chr5 20922298 20922429 -182163103 + MIR SINE MIR 34 174 -88 243 125 0 0 chr5 20922487 20922527 -182163005 + (TATG)n Simple_repeat Simple_repeat 1 40 0 1344 167 119 19 chr5 20922921 20923190 -182162342 - AluJo SINE Alu -3 309 14 2266 96 0 10 chr5 20924685 20924986 -182160546 - AluSq SINE Alu -15 298 1 21 0 0 0 chr5 20924996 20925017 -182160515 + AT_rich Low_complexity Low_complexity 1 21 0 261 75 0 0 chr5 20925389 20925429 -182160103 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 2006 128 3 3 chr5 20925429 20925711 -182159821 - AluSx SINE Alu -30 282 1 1235 146 0 0 chr5 20925883 20926075 -182159457 - Tigger5 DNA MER2_type 0 2323 2132 1989 144 10 0 chr5 20926090 20926381 -182159151 - AluJb SINE Alu -18 294 1 10409 122 59 12 chr5 20926386 20928059 -182157473 - Tigger1 DNA MER2_type -627 1791 40 3288 157 47 8 chr5 20928185 20928514 -182157018 - L1MB7 LINE L1 -5 6179 5864 2258 98 3 0 chr5 20928514 20928810 -182156722 - AluSp SINE Alu -16 297 1 3288 157 47 8 chr5 20928810 20929103 -182156429 - L1MB7 LINE L1 -320 5864 5533 189 0 0 0 chr5 20930324 20930345 -182155187 + (A)n Simple_repeat Simple_repeat 1 21 0 1512 103 94 5 chr5 20930361 20930584 -182154948 - AluSx SINE Alu -69 243 1 2049 98 11 14 chr5 20930663 20930940 -182154592 - AluSg SINE Alu -30 280 5 234 297 9 63 chr5 20932057 20932168 -182153364 - MIR SINE MIR -63 145 41 2346 101 0 0 chr5 20932326 20932623 -182152909 + AluSg SINE Alu 1 297 -13 1519 182 27 17 chr5 20933596 20933892 -182151640 + AluJb SINE Alu 1 299 -13 5867 87 1 5 chr5 20933954 20934758 -182150774 - L1PB1 LINE L1 0 6151 5351 1451 189 65 3 chr5 20934757 20935133 -182150399 - L1MD1 LINE L1 -70 6172 5626 * 363 23 0 0 chr5 20935135 20935179 -182150353 + (TG)n Simple_repeat Simple_repeat 1 44 0 242 258 0 15 chr5 20935286 20935352 -182150180 - L1ME LINE L1 -456 5665 5601 2088 115 17 3 chr5 20935605 20935901 -182149631 - AluSx SINE Alu -12 300 1 270 81 0 0 chr5 20935937 20935974 -182149558 + (TG)n Simple_repeat Simple_repeat 2 38 0 248 237 79 26 chr5 20936814 20936890 -182148642 + L2 LINE L2 3144 3223 -49 713 126 150 8 chr5 20936980 20937131 -182148401 + FRAM SINE Alu 1 169 0 1899 120 0 47 chr5 20937214 20937514 -182148018 - AluSx SINE Alu -3 309 24 208 225 42 56 chr5 20937775 20937846 -182147686 - MIR SINE MIR -152 110 41 304 236 176 34 chr5 20937923 20938071 -182147461 + MIR SINE MIR 80 248 -14 2146 114 7 10 chr5 20938274 20938573 -182146959 + AluSx SINE Alu 1 298 -14 280 326 50 21 chr5 20939427 20939568 -182145964 - MIR SINE MIR -14 248 104 2104 126 0 22 chr5 20939681 20939998 -182145534 - AluSg SINE Alu 0 310 1 879 204 6 0 chr5 20940001 20940158 -182145374 - AluSg/x SINE Alu -19 291 134 485 250 149 0 chr5 20940281 20940469 -182145063 - MER112 DNA MER1_type -38 222 7 2307 81 0 3 chr5 20940966 20941273 -182144259 - AluSc SINE Alu 0 306 1 470 207 0 63 chr5 20941431 20941542 -182143990 - MER20 DNA MER1_type -80 139 36 180 150 0 0 chr5 20942068 20942087 -182143445 + (C)n Simple_repeat Simple_repeat 1 19 -21 2494 63 3 7 chr5 20942087 20942390 -182143142 + AluY SINE Alu 1 302 -9 180 150 0 0 chr5 20942390 20942410 -182143122 + (C)n Simple_repeat Simple_repeat 18 40 0 1990 130 0 11 chr5 20942415 20942699 -182142833 - AluSx SINE Alu -31 281 1 2653 48 0 0 chr5 20942906 20943217 -182142315 + AluY SINE Alu 1 311 0 265 294 95 47 chr5 20943294 20943505 -182142027 + L2 LINE L2 2988 3208 -105 908 79 173 0 chr5 20943614 20943753 -182141779 - L1PA11 LINE L1 0 6174 6012 187 239 0 0 chr5 20943777 20943823 -182141709 - MIR SINE MIR -15 247 202 2720 51 0 0 chr5 20944125 20944436 -182141096 + AluY SINE Alu 1 311 0 352 156 82 4 chr5 20944713 20945081 -182140451 + (TA)n Simple_repeat Simple_repeat 1 396 0 1701 168 16 20 chr5 20947148 20947451 -182138081 + AluJb SINE Alu 1 302 -10 504 48 0 0 chr5 20947474 20947537 -182137995 + (CA)n Simple_repeat Simple_repeat 2 64 0 2286 100 0 0 chr5 20948771 20949060 -182136472 + AluSg SINE Alu 2 290 -20 2421 71 10 0 chr5 20949060 20949356 -182136176 + AluSc SINE Alu 1 299 -10 2287 84 7 7 chr5 20949534 20949830 -182135702 - AluSc SINE Alu -13 296 1 235 304 0 0 chr5 20950277 20950346 -182135186 + L2 LINE L2 3242 3310 -3 1044 222 17 17 chr5 20950435 20950669 -182134863 + MER46A DNA MER2_type 2 235 -1 731 176 24 0 chr5 20950715 20950840 -182134692 - FLAM_A SINE Alu -2 131 4 1784 228 77 57 chr5 20951379 20951443 -182134089 - MLT1E2 LTR MaLR 0 626 565 2423 49 3 23 chr5 20951443 20951747 -182133785 + AluY SINE Alu 1 298 -13 1784 228 77 57 chr5 20951747 20952296 -182133236 - MLT1E2 LTR MaLR -61 565 1 1205 200 0 96 chr5 20952308 20952653 -182132879 - AluJo SINE Alu 0 312 1 24 0 0 0 chr5 20952947 20952971 -182132561 + AT_rich Low_complexity Low_complexity 1 24 0 1928 157 0 3 chr5 20954042 20954348 -182131184 + AluJb SINE Alu 1 305 -7 765 242 68 5 chr5 20954523 20954713 -182130819 + MER20 DNA MER1_type 1 202 -17 2273 101 10 3 chr5 20954792 20955099 -182130433 - AluSx SINE Alu -3 309 1 1612 162 72 7 chr5 20955099 20955377 -182130155 - AluJo SINE Alu -16 296 1 2354 90 7 0 chr5 20956917 20957216 -182128316 + AluSg SINE Alu 1 301 -9 1757 165 16 32 chr5 20957390 20957706 -182127826 - AluJo SINE Alu -1 311 1 280 211 0 77 chr5 20959206 20959225 -182126307 - L1MA9 LINE L1 0 6312 6293 2288 70 13 20 chr5 20959225 20959523 -182126009 - AluY SINE Alu -15 296 1 1815 126 13 53 chr5 20959523 20959825 -182125707 - AluSx SINE Alu -22 290 1 280 211 0 77 chr5 20959825 20959908 -182125624 - L1MA9 LINE L1 -17 6295 6217 2285 110 13 0 chr5 20960399 20960707 -182124825 - AluSx SINE Alu 0 312 1 1618 141 21 4 chr5 20960969 20961210 -182124322 - AluJb SINE Alu -22 290 46 601 105 0 0 chr5 20961210 20961296 -182124236 - AluS SINE Alu -225 87 2 1768 156 24 17 chr5 20962449 20962744 -182122788 - AluJb SINE Alu -15 297 1 1657 139 45 45 chr5 20962744 20963053 -182122479 - AluJb SINE Alu -3 309 1 2432 78 10 0 chr5 20963203 20963511 -182122021 - AluY SINE Alu 0 311 1 1144 169 74 4 chr5 20963544 20963787 -182121745 - L1MB2 LINE L1 -4 6167 5908 1325 181 24 0 chr5 20963788 20964036 -182121496 - L1MB3 LINE L1 -214 5969 5716 2044 127 0 13 chr5 20964376 20964675 -182120857 + AluSx SINE Alu 1 295 -17 752 178 0 8 chr5 20965482 20965611 -182119921 - FLAM_C SINE Alu -14 129 2 2091 132 0 3 chr5 20966094 20966390 -182119142 + AluSx SINE Alu 1 295 -17 30 0 0 0 chr5 20966929 20966959 -182118573 + AT_rich Low_complexity Low_complexity 1 30 0 2443 164 107 35 chr5 20967528 20967632 -182117900 - L1MB5 LINE L1 0 6174 6079 1650 182 35 43 chr5 20967632 20968028 -182117504 - MSTD LTR MaLR 0 396 4 2443 164 107 35 chr5 20968028 20968194 -182117338 - L1MB5 LINE L1 -95 6079 5509 595 251 61 79 chr5 20968194 20968505 -182117027 - L1PB4 LINE L1 -287 5869 5563 1488 143 4 8 chr5 20968505 20968742 -182116790 - MER46A DNA MER2_type 0 236 1 595 251 61 79 chr5 20968742 20968760 -182116772 - L1PB4 LINE L1 -593 5563 5546 1090 171 0 11 chr5 20968953 20969140 -182116392 - MLT1B LTR MaLR -205 185 1 840 125 5 27 chr5 20969388 20969572 -182115960 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 422 239 8 0 chr5 20969543 20969677 -182115855 + CT-rich Low_complexity Low_complexity 2 136 0 * 2168 107 7 3 chr5 20969678 20969977 -182115555 - AluSg SINE Alu -10 300 1 435 191 0 32 chr5 20970009 20970103 -182115429 - L1MB3 LINE L1 -1 6182 6092 638 148 0 17 chr5 20970105 20970220 -182115312 + FLAM_C SINE Alu 30 142 -1 501 146 63 101 chr5 20970226 20970277 -182115255 - L1MB4 LINE L1 -76 6104 6053 2094 119 11 0 chr5 20970277 20970563 -182114969 - AluSx SINE Alu -23 289 1 501 146 63 101 chr5 20970563 20970669 -182114863 - L1MB4 LINE L1 -127 6053 5953 22 0 0 0 chr5 20971494 20971516 -182114016 + AT_rich Low_complexity Low_complexity 1 22 0 2399 63 7 10 chr5 20971947 20972249 -182113283 - AluSp SINE Alu -11 302 2 23 0 0 0 chr5 20972252 20972275 -182113257 + AT_rich Low_complexity Low_complexity 1 23 0 1949 154 7 0 chr5 20972275 20972574 -182112958 + AluSx SINE Alu 1 301 -11 318 107 0 0 chr5 20973697 20973753 -182111779 + (TC)n Simple_repeat Simple_repeat 1 56 0 255 61 0 0 chr5 20973753 20973786 -182111746 + (TG)n Simple_repeat Simple_repeat 2 34 0 315 122 0 0 chr5 20974306 20974355 -182111177 + (TG)n Simple_repeat Simple_repeat 2 50 0 222 171 0 0 chr5 20974958 20974999 -182110533 + (TA)n Simple_repeat Simple_repeat 1 41 0 2000 142 21 48 chr5 20975129 20975503 -182110029 - THE1B LTR MaLR 0 364 1 1704 144 46 25 chr5 20976090 20976374 -182109158 - AluSx SINE Alu -7 305 16 893 204 73 11 chr5 20976596 20976787 -182108745 - MER58A DNA MER1_type -16 208 6 253 281 70 53 chr5 20976862 20977090 -182108442 + L2 LINE L2 1522 1753 -1561 312 329 96 14 chr5 20977230 20977449 -182108083 + L2 LINE L2 2229 2465 -849 367 204 29 29 chr5 20977462 20977565 -182107967 - L1ME2 LINE L1 -7 6157 6055 2114 67 22 8 chr5 20977805 20978073 -182107459 + AluSx SINE Alu 5 276 -36 270 310 0 11 chr5 20978090 20978177 -182107355 + L2 LINE L2 2688 2773 -541 207 0 0 0 chr5 20978260 20978283 -182107249 + (T)n Simple_repeat Simple_repeat 1 23 0 2077 120 0 0 chr5 20978730 20979006 -182106526 - AluSx SINE Alu -36 276 1 26 0 0 0 chr5 20979006 20979032 -182106500 + AT_rich Low_complexity Low_complexity 1 26 0 260 83 0 0 chr5 20979073 20979109 -182106423 - MER5B DNA MER1_type -140 38 3 1025 193 25 55 chr5 20979159 20979259 -182106273 - MER46A DNA MER2_type 0 236 144 733 231 61 39 chr5 20979259 20979488 -182106044 + MER46A DNA MER2_type 3 236 0 285 266 76 0 chr5 20979683 20979762 -182105770 - MLT1I LTR MaLR -6 403 319 2309 110 0 16 chr5 20979989 20980306 -182105226 - AluSx SINE Alu 0 312 1 236 277 116 0 chr5 20980647 20980759 -182104773 - MLT1L LTR MaLR -10 605 481 194 283 67 0 chr5 20982084 20982144 -182103388 - L2 LINE L2 -56 3257 3194 233 135 96 19 chr5 20983219 20983271 -182102261 + MER58A DNA MER1_type 1 56 -168 593 176 44 52 chr5 20983305 20983441 -182102091 - L1MB3 LINE L1 -7 6176 6042 1048 174 35 0 chr5 20983450 20983622 -182101910 + MER58A DNA MER1_type 47 224 0 230 313 75 34 chr5 20983622 20983769 -182101763 - MIR3 SINE MIR -48 160 8 774 176 8 0 chr5 20984365 20984490 -182101042 + FLAM_A SINE Alu 4 129 -4 2279 107 0 0 chr5 20984514 20984814 -182100718 + AluSx SINE Alu 1 300 -12 2160 123 3 7 chr5 20985693 20985993 -182099539 + AluSx SINE Alu 1 299 -13 2051 169 64 10 chr5 20986779 20986904 -182098628 - MER61C LTR ERV1 0 434 317 2647 36 7 0 chr5 20986904 20987206 -182098326 + AluY SINE Alu 1 304 -7 2051 169 64 10 chr5 20987206 20987510 -182098022 - MER61C LTR ERV1 -117 317 1 2308 96 3 10 chr5 20987745 20988057 -182097475 + AluSg SINE Alu 1 310 0 333 281 195 14 chr5 20988114 20988324 -182097208 - MIR SINE MIR -6 256 9 283 263 21 11 chr5 20989539 20989634 -182095898 + L1M4 LINE L1 4102 4197 -1949 1913 159 0 10 chr5 20989702 20990010 -182095522 + AluJb SINE Alu 1 305 -7 2137 94 4 0 chr5 20990011 20990278 -182095254 + AluSg SINE Alu 13 280 -30 243 0 0 0 chr5 20990282 20990309 -182095223 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 862 168 52 7 chr5 20990309 20990464 -182095068 + FRAM SINE Alu 1 158 -18 183 246 98 0 chr5 20990864 20990925 -182094607 - L2 LINE L2 0 3313 3247 34 24 0 0 chr5 20991118 20991159 -182094373 + AT_rich Low_complexity Low_complexity 1 41 0 2517 71 0 7 chr5 20991178 20991487 -182094045 + AluY SINE Alu 1 307 -4 1283 160 9 5 chr5 20992220 20992433 -182093099 - AluJo SINE Alu -12 300 87 1009 242 125 24 chr5 20992816 20993192 -182092340 - L1ME1 LINE L1 -5 6161 5748 2452 71 3 3 chr5 20993467 20993764 -182091768 + AluSp SINE Alu 1 297 -16 186 43 0 0 chr5 20993990 20994013 -182091519 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1710 178 0 7 chr5 20994019 20994362 -182091170 + AluJb SINE Alu 1 341 0 265 246 53 18 chr5 20994509 20994623 -182090909 - L1P5 LINE L1 -556 5600 5483 2084 139 7 0 chr5 20994829 20995139 -182090393 + AluSp SINE Alu 1 312 -1 862 157 11 62 chr5 20995641 20995819 -182089713 - FRAM SINE Alu -15 161 1 753 107 27 9 chr5 20995834 20995946 -182089586 + FLAM_C SINE Alu 6 119 -24 252 0 0 0 chr5 20995946 20995974 -182089558 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2204 94 7 17 chr5 20996257 20996554 -182088978 + AluSx SINE Alu 1 294 -18 1894 165 0 9 chr5 20996921 20997236 -182088296 + AluJb SINE Alu 1 312 0 1813 187 25 104 chr5 20997789 20997919 -182087613 - Charlie1b DNA MER1_type -2238 523 384 2271 113 0 0 chr5 20997919 20998210 -182087322 + AluSx SINE Alu 1 291 -21 1813 187 25 104 chr5 20998210 20998423 -182087109 - Charlie1b DNA MER1_type -2377 384 156 2136 118 3 13 chr5 20998423 20998729 -182086803 + AluSx SINE Alu 1 303 -9 1813 187 25 104 chr5 20998729 20998872 -182086660 - Charlie1b DNA MER1_type -2605 156 3 1539 128 178 8 chr5 20998872 20999130 -182086402 + AluY SINE Alu 1 302 -9 1840 85 38 114 chr5 20999136 20999452 -182086080 + AluYb8 SINE Alu 5 296 -22 1813 187 25 104 chr5 20999452 20999513 -182086019 - Charlie1b DNA MER1_type -2686 75 11 609 270 95 0 chr5 21000040 21000262 -182085270 + MIR SINE MIR 15 257 -5 21 36 0 0 chr5 21000291 21000319 -182085213 + AT_rich Low_complexity Low_complexity 1 28 0 2690 78 101 12 chr5 21000362 21000770 -182084762 - MLT2A1 LTR ERVL 0 444 1 2422 95 0 0 chr5 21000909 21001213 -182084319 + AluSx SINE Alu 2 305 -7 2077 124 3 10 chr5 21001729 21002028 -182083504 - AluSx SINE Alu -10 302 6 2131 129 7 16 chr5 21002907 21003216 -182082316 - AluSx SINE Alu -6 306 1 243 0 0 0 chr5 21003750 21003777 -182081755 + (T)n Simple_repeat Simple_repeat 1 27 0 1479 169 23 49 chr5 21003936 21004244 -182081288 + AluJo SINE Alu 1 300 -12 2198 116 0 0 chr5 21004602 21004916 -182080616 + AluSq SINE Alu 1 314 0 304 256 40 72 chr5 21004981 21005106 -182080426 - MIR SINE MIR -94 168 48 2351 85 0 31 chr5 21005404 21005722 -182079810 - AluY SINE Alu -2 309 2 2413 75 3 3 chr5 21006671 21006966 -182078566 + AluSq SINE Alu 1 295 -18 539 268 42 19 chr5 21007029 21007249 -182078283 - MIR SINE MIR 0 262 37 274 321 37 8 chr5 21007278 21007412 -182078120 - MIR SINE MIR -55 207 70 1891 157 0 20 chr5 21007942 21008242 -182077290 + AluJb SINE Alu 13 306 -6 991 176 0 0 chr5 21008538 21008551 -182076981 - AluJb SINE Alu -17 295 283 426 20 0 0 chr5 21008551 21008602 -182076930 + (TG)n Simple_repeat Simple_repeat 1 51 0 991 176 0 0 chr5 21008602 21008747 -182076785 - AluJb SINE Alu -28 284 137 1901 149 0 56 chr5 21008747 21009068 -182076464 - AluJb SINE Alu -5 307 5 818 213 94 109 chr5 21009375 21009525 -182076007 + L1MC5 LINE L1 7451 7602 -359 1774 171 30 7 chr5 21009525 21009823 -182075709 + AluJo SINE Alu 1 305 -7 818 213 94 109 chr5 21009823 21010160 -182075372 + L1MC5 LINE L1 7602 7931 -30 2354 60 0 0 chr5 21010426 21010730 -182074802 + AluY SINE Alu 1 304 0 212 258 0 0 chr5 21011408 21011470 -182074062 + T-rich Low_complexity Low_complexity 1 62 0 196 82 31 72 chr5 21011807 21011904 -182073628 + (TTTAA)n Simple_repeat Simple_repeat 3 95 0 2309 105 3 0 chr5 21012120 21012424 -182073108 + AluSx SINE Alu 1 305 -7 2264 92 6 16 chr5 21012424 21012738 -182072794 + AluY SINE Alu 1 311 0 2163 119 0 16 chr5 21013305 21013615 -182071917 + AluSx SINE Alu 1 305 -7 369 223 87 10 chr5 21013627 21013730 -182071802 + MER104 DNA Tc2 58 168 -12 1928 115 49 18 chr5 21014124 21014410 -182071122 + AluSg SINE Alu 5 299 -11 2232 100 4 0 chr5 21014872 21015177 -182070355 - AluSp SINE Alu 0 306 1 22 0 0 0 chr5 21015467 21015489 -182070043 + AT_rich Low_complexity Low_complexity 1 22 0 2111 105 7 0 chr5 21016382 21016658 -182068874 - AluSx SINE Alu -6 306 29 309 51 0 0 chr5 21017246 21017285 -182068247 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 226 159 0 23 chr5 21017285 21017329 -182068203 + CT-rich Low_complexity Low_complexity 1 43 0 1999 122 6 47 chr5 21017335 21017654 -182067878 + AluSx SINE Alu 1 306 -6 961 189 6 0 chr5 21017655 21017824 -182067708 + AluJb SINE Alu 135 304 -8 2484 74 0 3 chr5 21017888 21018254 -182067278 - AluY SINE Alu 0 365 1 291 284 46 0 chr5 21019032 21019141 -182066391 - HsTC2 DNA Tc2 0 1900 1787 530 314 135 4 chr5 21019145 21019397 -182066135 - HsTC2 DNA Tc2 -1487 411 127 4330 80 5 0 chr5 21019427 21019978 -182065554 + MER41A LTR ERV1 1 554 0 1826 156 3 34 chr5 21020166 21020487 -182065045 - AluJo SINE Alu -1 311 1 2330 84 7 7 chr5 21020534 21020833 -182064699 - AluSq SINE Alu -14 299 1 251 309 48 16 chr5 21020836 21020962 -182064570 - L3 LINE CR1 -194 1383 1254 887 215 74 8 chr5 21021858 21022114 -182063418 - L1MC2 LINE L1 0 6344 6072 2076 131 0 0 chr5 21022233 21022530 -182063002 - AluSx SINE Alu -15 297 1 1897 144 3 0 chr5 21022761 21023052 -182062480 - AluSp SINE Alu -21 292 1 1842 121 36 4 chr5 21023066 21023347 -182062185 - AluSq SINE Alu -17 296 7 21 0 0 0 chr5 21023738 21023759 -182061773 + AT_rich Low_complexity Low_complexity 1 21 0 323 282 132 35 chr5 21025998 21026172 -182059360 - L1ME4a LINE L1 -6 6115 5925 277 222 67 44 chr5 21026336 21026426 -182059106 - L1ME4a LINE L1 -462 5659 5568 313 303 191 0 chr5 21026489 21026641 -182058891 + L1ME LINE L1 5265 5445 -719 883 192 48 0 chr5 21026683 21026850 -182058682 - FAM SINE Alu 0 175 1 252 224 0 17 chr5 21026915 21026973 -182058559 + L1ME LINE L1 5521 5577 -544 2103 123 0 0 chr5 21026979 21027280 -182058252 - AluSg SINE Alu -9 301 1 716 248 82 19 chr5 21028011 21028217 -182057315 - MER20 DNA MER1_type 0 219 1 1420 185 82 4 chr5 21030187 21030468 -182055064 - AluJo SINE Alu -9 303 1 2280 91 0 0 chr5 21031071 21031368 -182054164 - AluSq SINE Alu -16 297 1 264 268 28 14 chr5 21032552 21032623 -182052909 + MIR3 SINE MIR 114 185 -23 2186 119 0 0 chr5 21032727 21033039 -182052493 - AluSx SINE Alu 0 312 1 249 163 0 0 chr5 21033621 21033670 -182051862 + CT-rich Low_complexity Low_complexity 3 51 0 231 211 74 53 chr5 21033960 21034055 -182051477 - L1ME3A LINE L1 0 6170 6074 1906 118 0 21 chr5 21034242 21034551 -182050981 + AluSx SINE Alu 1 303 0 2225 92 0 0 chr5 21034552 21034846 -182050686 + AluSg1 SINE Alu 5 298 -11 315 206 0 29 chr5 21035705 21035773 -182049759 - MLT1L LTR MaLR -218 397 332 2363 61 24 0 chr5 21036147 21036444 -182049088 + AluY SINE Alu 1 304 -7 276 267 100 0 chr5 21036781 21036871 -182048661 - MER5C DNA MER1_type 0 324 226 264 30 0 0 chr5 21036871 21036904 -182048628 + LTR12 LTR ERV1 285 317 -397 319 271 0 0 chr5 21037001 21037071 -182048461 - MER5C DNA MER1_type -202 122 53 236 269 142 22 chr5 21037130 21037317 -182048215 + MIR SINE MIR 45 262 0 1054 178 50 31 chr5 21038612 21038870 -182046662 - MER33 DNA MER1_type -1 323 61 281 170 57 0 chr5 21038909 21038956 -182046576 - MER58A DNA MER1_type -1 223 174 614 210 118 0 chr5 21038956 21039075 -182046457 - MER58A DNA MER1_type 0 136 4 701 271 33 28 chr5 21039285 21039499 -182046033 + MIR SINE MIR 4 218 -44 227 356 0 0 chr5 21039519 21039609 -182045923 + (CTA)n Simple_repeat Simple_repeat 1 90 0 2117 104 10 3 chr5 21039805 21040103 -182045429 + AluSx SINE Alu 1 300 -12 245 288 55 0 chr5 21040357 21040430 -182045102 + MIR SINE MIR 157 233 -29 2136 114 0 28 chr5 21040497 21040814 -182044718 + AluSg SINE Alu 1 308 -2 213 116 23 47 chr5 21041078 21041121 -182044411 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 4367 207 121 16 chr5 21041522 21042484 -182043048 - L1MD3 LINE L1 -754 5392 5333 2326 58 0 39 chr5 21042484 21042795 -182042737 - AluY SINE Alu -12 299 1 4367 207 121 16 chr5 21042795 21043356 -182042176 - L1MD3 LINE L1 -813 5333 4832 2059 90 0 17 chr5 21045132 21045471 -182040061 + AluY SINE Alu 1 334 0 441 95 0 0 chr5 21045852 21045915 -182039617 + (CA)n Simple_repeat Simple_repeat 2 64 0 2138 115 0 0 chr5 21045915 21046210 -182039322 - AluSp SINE Alu -18 295 1 1511 108 5 9 chr5 21046561 21046784 -182038748 - pTR5 LTR ERV1 -2046 392 171 375 214 31 20 chr5 21046786 21046884 -182038648 - LTR30 LTR ERV1 -80 642 544 6433 157 67 36 chr5 21046884 21048125 -182037407 - pTR5 LTR ERV1 -419 2019 741 1968 126 3 17 chr5 21048756 21049058 -182036474 + AluSx SINE Alu 1 298 -14 206 346 0 0 chr5 21049066 21049118 -182036414 + MIR SINE MIR 92 143 -65 2564 26 3 0 chr5 21049383 21049685 -182035847 - AluY SINE Alu -8 303 1 2230 101 0 0 chr5 21050134 21050430 -182035102 - AluSx SINE Alu -16 296 1 657 214 0 13 chr5 21050448 21050602 -182034930 - L1MB8 LINE L1 0 6178 6027 860 128 8 8 chr5 21050624 21050757 -182034775 + AluSp SINE Alu 38 170 -143 243 0 0 0 chr5 21050770 21050797 -182034735 + (A)n Simple_repeat Simple_repeat 1 27 0 430 216 0 0 chr5 21050797 21050871 -182034661 - Tigger3(Golem) DNA MER2_type -2954 75 2 30 0 0 0 chr5 21051066 21051096 -182034436 + AT_rich Low_complexity Low_complexity 1 30 0 1541 132 48 0 chr5 21051098 21051348 -182034184 - L1MA2 LINE L1 -29 6275 6014 1588 58 0 19 chr5 21051376 21051583 -182033949 - AluY SINE Alu -39 272 70 249 250 0 0 chr5 21052143 21052195 -182033337 + L2 LINE L2 3261 3312 -1 204 40 0 0 chr5 21054057 21054082 -182031450 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 429 254 154 54 chr5 21054244 21054393 -182031139 + L1MC5 LINE L1 7593 7726 -235 2188 64 51 0 chr5 21054393 21054688 -182030844 - AluSg SINE Alu 0 310 1 429 254 154 54 chr5 21054688 21054818 -182030714 + L1MC5 LINE L1 7726 7900 -61 1435 257 150 2 chr5 21056380 21056894 -182028638 - MLT1E LTR MaLR -3 590 1 234 282 83 83 chr5 21056903 21057059 -182028473 + L2 LINE L2 2949 3104 -168 1802 168 0 3 chr5 21057326 21057624 -182027908 + AluJo SINE Alu 1 297 -15 2856 91 3 0 chr5 21058903 21059266 -182026266 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr5 21059398 21059428 -182026104 + AT_rich Low_complexity Low_complexity 1 30 0 183 204 0 0 chr5 21059864 21059908 -182025624 + (TATATG)n Simple_repeat Simple_repeat 6 49 0 318 272 22 22 chr5 21059909 21060001 -182025531 + L1MC4 LINE L1 6613 6704 -1338 1984 105 3 7 chr5 21060003 21060289 -182025243 - AluSx SINE Alu -27 285 1 21 71 0 0 chr5 21060294 21060336 -182025196 + AT_rich Low_complexity Low_complexity 1 42 0 625 246 177 0 chr5 21061128 21061360 -182024172 + MER5C DNA MER1_type 8 280 -44 1483 155 45 38 chr5 21061853 21062144 -182023388 - AluJb SINE Alu -19 293 1 2277 86 0 16 chr5 21062279 21062592 -182022940 - AluSc SINE Alu -1 308 1 256 147 29 44 chr5 21063194 21063262 -182022270 + GA-rich Low_complexity Low_complexity 3 69 0 1901 211 21 0 chr5 21063881 21064260 -182021272 - MLT1B LTR MaLR -1 389 3 1874 149 3 0 chr5 21065485 21065794 -182019738 - AluSx SINE Alu -2 310 1 861 139 0 0 chr5 21066374 21066518 -182019014 - AluSg/x SINE Alu -2 310 167 215 188 0 14 chr5 21067109 21067178 -182018354 + CT-rich Low_complexity Low_complexity 1 68 0 2384 57 0 0 chr5 21067266 21067565 -182017967 + AluY SINE Alu 1 299 -12 1547 173 37 0 chr5 21067787 21068100 -182017432 - AluJo SINE Alu 0 323 1 22 0 0 0 chr5 21068102 21068124 -182017408 + AT_rich Low_complexity Low_complexity 1 22 0 2106 107 7 0 chr5 21068479 21068769 -182016763 - AluSg SINE Alu -18 292 1 328 261 17 9 chr5 21068778 21068893 -182016639 + T-rich Low_complexity Low_complexity 1 116 0 2269 91 0 0 chr5 21069314 21069612 -182015920 - AluSg SINE Alu -11 299 2 24 67 0 0 chr5 21070001 21070046 -182015486 + AT_rich Low_complexity Low_complexity 1 45 0 2211 98 0 0 chr5 21070841 21071137 -182014395 - AluSx SINE Alu -16 296 1 1701 135 4 11 chr5 21072922 21073188 -182012344 - AluJb SINE Alu -32 280 17 869 243 69 107 chr5 21073428 21073742 -182011790 - L1MC5 LINE L1 -44 7917 7593 2369 104 3 0 chr5 21073742 21074050 -182011482 - AluSx SINE Alu -3 309 1 869 243 69 107 chr5 21074050 21074458 -182011074 - L1MC5 LINE L1 -368 7593 7222 2343 100 0 0 chr5 21074473 21074772 -182010760 - AluSx SINE Alu -13 299 1 2485 67 0 3 chr5 21074903 21075201 -182010331 - AluY SINE Alu -14 297 1 979 199 108 111 chr5 21075806 21076147 -182009385 + MER2 DNA MER2_type 6 345 0 338 258 16 70 chr5 21076939 21077067 -182008465 - MIR SINE MIR -37 225 105 2274 99 3 0 chr5 21077424 21077717 -182007815 - AluSp SINE Alu -6 307 14 1847 165 4 0 chr5 21078835 21079147 -182006385 - AluJo SINE Alu 0 315 3 2121 101 38 3 chr5 21079362 21079649 -182005883 + AluSq SINE Alu 1 297 -16 1401 118 77 14 chr5 21079689 21079910 -182005622 - MER46A DNA MER2_type 0 236 2 1721 166 38 3 chr5 21080681 21080971 -182004561 + AluJo SINE Alu 5 304 -8 2015 125 17 3 chr5 21081125 21081421 -182004111 - AluSx SINE Alu -12 300 1 1784 154 20 10 chr5 21081645 21081938 -182003594 + AluSp SINE Alu 1 296 -17 21 57 0 0 chr5 21081973 21082008 -182003524 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 21083378 21083400 -182002132 + AT_rich Low_complexity Low_complexity 1 22 0 1211 155 24 19 chr5 21085192 21085398 -182000134 - AluJb SINE Alu -25 287 81 213 344 56 16 chr5 21085867 21085992 -181999540 + L2 LINE L2 3141 3270 -2 2190 124 3 0 chr5 21086366 21086664 -181998868 + AluSx SINE Alu 1 299 -13 2179 106 3 23 chr5 21087588 21087891 -181997641 - AluSx SINE Alu -15 297 1 2255 105 0 3 chr5 21088128 21088423 -181997109 + AluSq SINE Alu 1 294 -19 2513 67 0 0 chr5 21088474 21088772 -181996760 + AluY SINE Alu 1 298 -13 27 29 0 0 chr5 21088906 21088940 -181996592 + AT_rich Low_complexity Low_complexity 1 34 0 806 142 58 0 chr5 21089340 21089460 -181996072 - FLAM_C SINE Alu -16 127 1 2113 117 0 3 chr5 21089464 21089754 -181995778 - AluSg SINE Alu -21 289 1 2012 164 0 0 chr5 21090429 21090733 -181994799 - AluSx SINE Alu -8 304 1 23 0 0 0 chr5 21091601 21091624 -181993908 + AT_rich Low_complexity Low_complexity 1 23 0 2438 80 0 3 chr5 21091701 21092002 -181993530 - AluSq SINE Alu -13 300 1 2357 109 0 0 chr5 21093879 21094182 -181991350 - AluSx SINE Alu -9 303 1 301 253 163 11 chr5 21094975 21095165 -181990367 - L2 LINE L2 -117 3196 2978 936 202 62 5 chr5 21096177 21096385 -181989147 + MER58A DNA MER1_type 2 221 -3 2228 86 38 0 chr5 21096691 21096982 -181988550 + AluY SINE Alu 1 302 -9 2088 106 57 0 chr5 21100972 21101255 -181984277 - AluSg SINE Alu -11 299 1 550 297 29 24 chr5 21102006 21102215 -181983317 - L1MD2 LINE L1 -10 6349 6140 1068 164 19 56 chr5 21102248 21102461 -181983071 + MER2 DNA MER2_type 1 205 -140 801 205 13 0 chr5 21102479 21102630 -181982902 - AluJb SINE Alu -20 292 140 2453 122 11 6 chr5 21103163 21103525 -181982007 - THE1B LTR MaLR 0 364 1 1968 168 7 0 chr5 21103554 21103864 -181981668 + AluJo SINE Alu 1 312 0 928 269 23 0 chr5 21104195 21104414 -181981118 + MER58A DNA MER1_type 1 224 0 222 318 73 73 chr5 21105087 21105279 -181980253 + L2 LINE L2 2599 2790 -524 1916 105 49 0 chr5 21105321 21105587 -181979945 - AluSg SINE Alu -31 279 1 838 194 4 106 chr5 21105823 21106050 -181979482 + MER63A DNA MER1_type 7 210 0 1463 287 67 25 chr5 21107027 21107090 -181978442 - MLT1H LTR MaLR 0 549 490 2199 106 23 3 chr5 21107090 21107391 -181978141 - AluSq SINE Alu -6 307 1 1463 287 67 25 chr5 21107391 21107846 -181977686 - MLT1H LTR MaLR -59 490 9 1889 176 94 8 chr5 21107921 21108313 -181977219 + MSTB LTR MaLR 1 426 0 423 150 59 124 chr5 21108601 21108745 -181976787 + MLT1J LTR MaLR 1 134 -377 883 273 130 55 chr5 21108745 21109256 -181976276 + MLT1G1 LTR MaLR 1 592 -3 592 330 42 13 chr5 21109259 21109702 -181975830 + MLT1G1-int LTR MaLR 2 576 -795 2210 128 0 0 chr5 21109934 21110232 -181975300 - AluSx SINE Alu -14 298 1 289 262 69 55 chr5 21110773 21110918 -181974614 + MLT1G1-int LTR MaLR 1574 1720 -15 789 254 24 52 chr5 21110930 21111178 -181974354 + MLT1F1 LTR MaLR 1 241 -326 356 286 93 54 chr5 21111335 21111453 -181974079 + L1M4 LINE L1 4129 4241 -1905 21296 29 8 6 chr5 21111453 21114777 -181970755 + L1PA4 LINE L1 2822 6155 0 356 286 93 54 chr5 21114777 21114938 -181970594 + L1M4 LINE L1 4241 4419 -1727 2243 108 0 3 chr5 21115479 21115776 -181969756 + AluSx SINE Alu 1 296 -16 311 313 180 27 chr5 21115787 21116087 -181969445 + L2 LINE L2 2967 3312 -1 1737 170 38 3 chr5 21116476 21116765 -181968767 - AluJo SINE Alu -13 299 1 27395 48 9 5 chr5 21116819 21120188 -181965344 + L1P LINE L1 1 3384 -2762 1047 192 49 8 chr5 21120188 21120433 -181965099 - MER39 LTR ERV1 -60 647 393 3517 42 16 5 chr5 21120466 21120899 -181964633 + L1PA4 LINE L1 5715 6152 -3 973 203 85 42 chr5 21120932 21121043 -181964489 + MLT1D LTR MaLR 6 111 -394 2096 120 14 0 chr5 21121043 21121327 -181964205 + AluSg SINE Alu 1 288 -22 973 203 85 42 chr5 21121327 21121667 -181963865 + MLT1D LTR MaLR 111 505 0 1778 131 134 7 chr5 21121970 21122275 -181963257 + MER2 DNA MER2_type 1 344 0 2120 105 14 14 chr5 21122418 21122713 -181962819 + AluSc SINE Alu 2 296 -13 764 267 73 54 chr5 21122772 21123143 -181962389 - MLT1J1 LTR MaLR 0 446 69 770 266 46 14 chr5 21123383 21123601 -181961931 + HERV16 LTR ERVL 1607 1831 -3165 1046 299 46 19 chr5 21123709 21124234 -181961298 + HERV16 LTR ERVL 2006 2506 -2490 503 283 279 24 chr5 21124608 21125064 -181960468 + L2 LINE L2 237 576 -2738 2452 88 7 0 chr5 21125064 21125372 -181960160 - AluY SINE Alu -1 310 1 503 283 279 24 chr5 21125372 21125622 -181959910 + L2 LINE L2 576 761 -2553 2127 164 126 42 chr5 21125622 21126099 -181959433 + MLT2B1 LTR ERVL 3 519 -1 503 283 279 24 chr5 21126099 21126377 -181959155 + L2 LINE L2 761 1473 -1841 865 299 165 24 chr5 21126414 21126781 -181958751 + L2 LINE L2 2259 2573 -740 1908 152 10 3 chr5 21126781 21127084 -181958448 + AluSx SINE Alu 1 305 -7 865 299 165 24 chr5 21127084 21127399 -181958133 + L2 LINE L2 2573 3035 -278 43672 44 11 5 chr5 21127401 21133212 -181952320 + L1PA4 LINE L1 1 5844 -311 1052 140 59 16 chr5 21134872 21135058 -181950474 - AluSq SINE Alu 0 313 120 569 100 100 10 chr5 21135498 21135598 -181949934 - AluSq SINE Alu -170 143 35 2183 112 0 7 chr5 21136629 21136924 -181948608 + AluSg SINE Alu 2 294 -16 1522 185 82 4 chr5 21137527 21137808 -181947724 + AluJo SINE Alu 1 303 -9 702 248 82 19 chr5 21139778 21139984 -181945548 + MER20 DNA MER1_type 1 219 0 573 128 0 32 chr5 21140682 21140776 -181944756 - 5S rRNA rRNA -30 91 1 2493 63 0 13 chr5 21141381 21141681 -181943851 - AluY SINE Alu -15 296 1 188 333 93 0 chr5 21141949 21142057 -181943475 - MIR3 SINE MIR -6 202 85 269 106 0 21 chr5 21142624 21142671 -181942861 + (TTCC)n Simple_repeat Simple_repeat 1 46 0 2440 95 0 0 chr5 21142687 21142993 -181942539 - AluSg SINE Alu -4 306 1 1866 120 25 32 chr5 21143660 21143944 -181941588 + AluSx SINE Alu 1 282 -30 21 0 0 0 chr5 21144165 21144186 -181941346 + AT_rich Low_complexity Low_complexity 1 21 0 2163 95 3 14 chr5 21144188 21144500 -181941032 + AluSg SINE Alu 1 309 0 1043 149 0 0 chr5 21145645 21145799 -181939733 + FRAM SINE Alu 1 154 -22 933 138 6 50 chr5 21146305 21146465 -181939067 + AluSx SINE Alu 1 153 -159 665 110 0 63 chr5 21146553 21146680 -181938852 + AluSp/q SINE Alu 189 307 -6 927 142 20 0 chr5 21146926 21147074 -181938458 - FAM SINE Alu -13 172 22 2025 107 16 23 chr5 21147529 21147839 -181937693 + AluSq SINE Alu 3 310 -3 826 159 32 16 chr5 21147850 21148039 -181937493 + Charlie5 DNA MER1_type 2380 2571 -41 198 0 0 0 chr5 21148923 21148945 -181936587 + (T)n Simple_repeat Simple_repeat 1 22 0 350 188 27 9 chr5 21149207 21149319 -181936213 + CT-rich Low_complexity Low_complexity 3 116 0 2162 127 10 0 chr5 21149627 21149934 -181935598 - AluSx SINE Alu -2 310 1 693 176 0 0 chr5 21149951 21150059 -181935473 - FLAM_C SINE Alu -23 120 13 198 0 0 0 chr5 21150444 21150466 -181935066 + (TG)n Simple_repeat Simple_repeat 2 23 0 418 274 64 32 chr5 21151667 21151824 -181933708 - MIR SINE MIR -66 196 35 1125 220 52 12 chr5 21151841 21152221 -181933311 + L1MC3 LINE L1 7349 7778 -7 2212 125 3 3 chr5 21152562 21152867 -181932665 - AluSx SINE Alu -6 306 2 2671 51 0 6 chr5 21153008 21153321 -181932211 - AluY SINE Alu 0 311 1 1720 180 0 7 chr5 21153570 21153875 -181931657 - AluSx SINE Alu -8 304 2 180 296 0 0 chr5 21154155 21154199 -181931333 - L2 LINE L2 -41 3272 3229 1128 160 9 41 chr5 21154591 21154810 -181930722 - L1MB7 LINE L1 -20 6164 5953 * 2726 166 34 19 chr5 21154809 21154876 -181930656 - L1MB8 LINE L1 -213 5965 5901 1306 167 3 108 chr5 21154876 21155217 -181930315 - AluSx SINE Alu -7 305 1 2726 166 34 19 chr5 21155217 21155356 -181930176 - L1MB8 LINE L1 -277 5901 5766 2234 117 0 0 chr5 21155356 21155655 -181929877 - AluSx SINE Alu -8 304 6 2726 166 34 19 chr5 21155655 21156001 -181929531 - L1MB8 LINE L1 -412 5766 5472 546 141 8 25 chr5 21156643 21156764 -181928768 + CT-rich Low_complexity Low_complexity 2 120 0 1504 112 0 0 chr5 21156786 21156982 -181928550 - AluSg/x SINE Alu -32 280 85 1984 149 0 22 chr5 21156982 21157298 -181928234 - AluJb SINE Alu -3 309 1 1277 185 60 57 chr5 21157423 21157575 -181927957 - AluJo SINE Alu -13 299 144 1659 109 5 0 chr5 21157575 21157795 -181927737 - AluSp SINE Alu -14 299 79 1277 185 60 57 chr5 21157795 21157940 -181927592 - AluJo SINE Alu -168 144 1 224 282 13 0 chr5 21158022 21158100 -181927432 + (TGGA)n Simple_repeat Simple_repeat 3 81 0 2182 132 0 0 chr5 21158396 21158699 -181926833 + AluSx SINE Alu 1 303 -9 2146 136 0 0 chr5 21159226 21159536 -181925996 - AluSx SINE Alu -2 310 1 2221 116 3 3 chr5 21160493 21160796 -181924736 - AluSx SINE Alu -9 303 1 331 155 52 0 chr5 21161338 21161396 -181924136 + MER20 DNA MER1_type 155 215 -4 1603 172 37 17 chr5 21161776 21162073 -181923459 - AluJb SINE Alu -4 308 6 237 183 256 0 chr5 21162515 21162597 -181922935 - MER58B DNA MER1_type -37 304 202 2597 69 0 0 chr5 21162972 21163277 -181922255 + AluY SINE Alu 1 305 -6 1996 243 80 19 chr5 21163287 21163930 -181921602 - L1ME1 LINE L1 -6 6160 5465 2013 152 3 7 chr5 21165982 21166292 -181919240 - AluSx SINE Alu -3 309 1 184 241 56 0 chr5 21166581 21166635 -181918897 + MIR SINE MIR 74 130 -132 2443 104 3 6 chr5 21167195 21167551 -181917981 - L1PB2 LINE L1 0 6151 5797 374 246 109 0 chr5 21168047 21168185 -181917347 + MIR SINE MIR 15 167 -95 1616 184 46 23 chr5 21168981 21169329 -181916203 - MLT1A1 LTR MaLR 0 365 10 2104 127 0 0 chr5 21169333 21169625 -181915907 + AluSx SINE Alu 1 292 -20 1909 127 0 18 chr5 21170045 21170328 -181915204 - AluSx SINE Alu 0 312 35 2514 58 92 0 chr5 21171015 21171340 -181914192 + THE1A LTR MaLR 1 355 0 11507 92 10 19 chr5 21171340 21171847 -181913685 + THE1A-int LTR MaLR 1 511 -1069 2385 83 0 0 chr5 21171847 21172137 -181913395 - AluY SINE Alu -21 290 1 11507 92 10 19 chr5 21172137 21173223 -181912309 + THE1A-int LTR MaLR 511 1580 0 2710 67 32 3 chr5 21173223 21173568 -181911964 + THE1A LTR MaLR 1 355 0 1435 189 88 1 chr5 21173653 21173955 -181911577 - L1MB2 LINE L1 -7 6164 5837 1646 178 28 0 chr5 21174570 21174857 -181910675 - AluJb SINE Alu -17 295 1 828 207 5 5 chr5 21174991 21175179 -181910353 + L1MB3 LINE L1 5986 6173 -10 1974 104 3 10 chr5 21175281 21175579 -181909953 - AluSp SINE Alu -14 299 4 395 202 225 23 chr5 21175671 21175800 -181909732 - MER5A DNA MER1_type -21 168 14 270 81 0 0 chr5 21176244 21176281 -181909251 + (CCCCCT)n Simple_repeat Simple_repeat 5 41 0 21 36 0 0 chr5 21176293 21176321 -181909211 + AT_rich Low_complexity Low_complexity 1 28 0 1619 145 0 30 chr5 21176322 21176619 -181908913 - AluSx SINE Alu -24 288 1 915 197 82 41 chr5 21176627 21176866 -181908666 - AluJo SINE Alu -24 288 35 2123 82 0 50 chr5 21176866 21177185 -181908347 + AluY SINE Alu 1 303 -8 915 197 82 41 chr5 21177185 21177214 -181908318 - AluJo SINE Alu -277 35 9 2126 87 0 10 chr5 21177586 21177885 -181907647 - AluY SINE Alu -15 296 1 386 216 0 0 chr5 21179683 21179757 -181905775 - MER116 DNA Mariner -6 74 1 477 0 0 0 chr5 21180151 21180204 -181905328 + (TG)n Simple_repeat Simple_repeat 2 54 0 600 176 91 30 chr5 21180204 21180363 -181905169 - L1MB4 LINE L1 -7 6173 6005 1353 114 3 70 chr5 21180364 21180702 -181904830 - AluSx SINE Alu 0 312 21 1714 182 0 0 chr5 21182129 21182431 -181903101 - AluJb SINE Alu -10 302 1 25 0 0 0 chr5 21183666 21183691 -181901841 + AT_rich Low_complexity Low_complexity 1 25 0 269 309 47 54 chr5 21184289 21184438 -181901094 - MIR SINE MIR -74 188 41 2169 92 0 20 chr5 21184660 21184964 -181900568 - AluSq SINE Alu -15 298 1 559 253 53 24 chr5 21185091 21185261 -181900271 + MER5B DNA MER1_type 3 177 -1 189 147 0 0 chr5 21185463 21185497 -181900035 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 338 299 53 48 chr5 21185668 21185855 -181899677 + MER5A DNA MER1_type 2 189 0 242 143 0 0 chr5 21186451 21186486 -181899046 + MLT1A1 LTR MaLR 1 35 -330 1531 178 8 4 chr5 21186499 21186763 -181898769 - AluJo SINE Alu -26 286 22 1914 179 24 3 chr5 21186777 21187106 -181898426 + MLT1A1 LTR MaLR 26 361 -4 1989 139 0 0 chr5 21187275 21187570 -181897962 - AluSg SINE Alu -15 295 1 180 0 0 0 chr5 21187789 21187809 -181897723 + (T)n Simple_repeat Simple_repeat 1 20 0 800 215 143 5 chr5 21187926 21188135 -181897397 + MER58 DNA MER1_type 1 238 -2182 332 265 59 56 chr5 21188333 21188483 -181897049 + MER5B DNA MER1_type 5 165 -24 798 239 11 37 chr5 21188582 21188770 -181896762 - MER5A DNA MER1_type 0 189 7 305 222 201 21 chr5 21189406 21189550 -181895982 + MER96 DNA MER1_type? 4 173 -2 2027 112 31 0 chr5 21189691 21189977 -181895555 - AluSx SINE Alu -17 295 1 203 314 0 0 chr5 21190630 21190681 -181894851 + L3 LINE CR1 326 376 -1201 2072 119 3 3 chr5 21191201 21191504 -181894028 - AluSq SINE Alu -10 303 1 225 0 0 0 chr5 21191508 21191533 -181893999 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1282 205 38 40 chr5 21191553 21191900 -181893632 - L1MB8 LINE L1 -37 6141 5796 1435 257 150 2 chr5 21193920 21194434 -181891098 - MLT1E LTR MaLR -3 590 1 202 289 83 83 chr5 21194443 21194599 -181890933 + L2 LINE L2 2949 3104 -168 1802 168 0 3 chr5 21194866 21195164 -181890368 + AluJo SINE Alu 1 297 -15 2856 91 3 0 chr5 21196444 21196807 -181888725 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr5 21196939 21196969 -181888563 + AT_rich Low_complexity Low_complexity 1 30 0 183 204 0 0 chr5 21197405 21197449 -181888083 + (TATATG)n Simple_repeat Simple_repeat 6 49 0 318 272 22 22 chr5 21197450 21197542 -181887990 + L1MC4 LINE L1 6613 6704 -1338 1984 105 3 7 chr5 21197544 21197830 -181887702 - AluSx SINE Alu -27 285 1 21 71 0 0 chr5 21197835 21197877 -181887655 + AT_rich Low_complexity Low_complexity 1 42 0 625 246 177 0 chr5 21198669 21198901 -181886631 + MER5C DNA MER1_type 8 280 -44 1483 155 45 38 chr5 21199394 21199685 -181885847 - AluJb SINE Alu -19 293 1 2277 86 0 16 chr5 21199821 21200134 -181885398 - AluSc SINE Alu -1 308 1 256 147 29 44 chr5 21200736 21200804 -181884728 + GA-rich Low_complexity Low_complexity 3 69 0 1901 211 21 0 chr5 21201423 21201802 -181883730 - MLT1B LTR MaLR -1 389 3 1874 149 3 0 chr5 21203028 21203337 -181882195 - AluSx SINE Alu -2 310 1 861 139 0 0 chr5 21203917 21204061 -181881471 - AluSg/x SINE Alu -2 308 165 215 188 0 14 chr5 21204652 21204721 -181880811 + CT-rich Low_complexity Low_complexity 1 68 0 2384 57 0 0 chr5 21204809 21205108 -181880424 + AluY SINE Alu 1 299 -12 1547 173 37 0 chr5 21205330 21205643 -181879889 - AluJo SINE Alu 0 323 1 22 0 0 0 chr5 21205645 21205667 -181879865 + AT_rich Low_complexity Low_complexity 1 22 0 2106 107 7 0 chr5 21206022 21206312 -181879220 - AluSg SINE Alu -18 292 1 328 261 17 9 chr5 21206321 21206436 -181879096 + T-rich Low_complexity Low_complexity 1 116 0 2269 91 0 0 chr5 21206857 21207155 -181878377 - AluSg SINE Alu -11 299 2 24 67 0 0 chr5 21207544 21207589 -181877943 + AT_rich Low_complexity Low_complexity 1 45 0 2211 98 0 0 chr5 21208384 21208680 -181876852 - AluSx SINE Alu -16 296 1 1596 135 4 11 chr5 21210465 21210731 -181874801 - AluJb SINE Alu -32 280 17 591 263 70 47 chr5 21210971 21211272 -181874260 - L1MC5 LINE L1 -44 7917 7610 2168 117 0 0 chr5 21211285 21211594 -181873938 - AluSx SINE Alu -3 309 1 1630 184 46 23 chr5 21211598 21211946 -181873586 + MLT1A1 LTR MaLR 10 365 0 436 246 109 0 chr5 21212741 21212879 -181872653 - MIR SINE MIR -95 167 15 1880 107 11 0 chr5 21213377 21213649 -181871883 + L1PB1 LINE L1 5797 6071 -80 1902 151 3 3 chr5 21214540 21214844 -181870688 + AluSx SINE Alu 1 304 -8 2041 135 0 0 chr5 21215801 21216112 -181869420 + AluSx SINE Alu 1 311 -1 2009 139 0 0 chr5 21216639 21216942 -181868590 - AluSx SINE Alu -9 303 1 224 282 13 0 chr5 21217238 21217316 -181868216 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 1329 178 60 57 chr5 21217398 21217543 -181867989 + AluJo SINE Alu 1 144 -158 1570 109 5 0 chr5 21217543 21217763 -181867769 + AluSp SINE Alu 79 299 -14 1329 178 60 57 chr5 21217763 21217915 -181867617 + AluJo SINE Alu 144 299 -3 1842 154 0 25 chr5 21218040 21218359 -181867173 + AluJb SINE Alu 1 311 -1 1403 124 10 0 chr5 21218360 21218569 -181866963 + AluSg/x SINE Alu 86 296 -16 774 127 13 7 chr5 21218577 21218727 -181866805 + GA-rich Low_complexity Low_complexity 2 152 0 2728 165 35 17 chr5 21219371 21219717 -181865815 + L1MB8 LINE L1 5472 5810 -368 2111 117 0 0 chr5 21219717 21220016 -181865516 + AluSx SINE Alu 6 304 -8 2728 165 35 17 chr5 21220016 21220155 -181865377 + L1MB8 LINE L1 5810 5910 -268 1680 146 7 45 chr5 21220155 21220464 -181865068 + AluSx SINE Alu 1 297 -15 2728 165 35 17 chr5 21220464 21220522 -181865010 + L1MB8 LINE L1 5910 5965 -213 1126 160 9 41 chr5 21220539 21220758 -181864774 + L1MB7 LINE L1 5953 6164 -20 199 313 0 0 chr5 21221150 21221198 -181864334 + L2 LINE L2 3229 3276 -37 1616 180 0 7 chr5 21221474 21221779 -181863753 + AluSx SINE Alu 2 304 -8 2425 62 0 7 chr5 21222028 21222335 -181863197 + AluY SINE Alu 1 305 -6 2043 127 3 7 chr5 21222469 21222776 -181862756 + AluSx SINE Alu 2 307 -5 1131 220 52 12 chr5 21223117 21223497 -181862035 - L1MC3 LINE L1 -7 7778 7349 417 310 51 25 chr5 21223513 21223671 -181861861 + MIR SINE MIR 35 196 -66 414 0 0 0 chr5 21224869 21224915 -181860617 + (CA)n Simple_repeat Simple_repeat 2 47 0 697 176 0 0 chr5 21225300 21225408 -181860124 + FLAM_C SINE Alu 13 120 -23 2056 124 10 0 chr5 21225425 21225732 -181859800 + AluSx SINE Alu 1 310 -2 350 188 27 9 chr5 21226040 21226152 -181859380 + GA-rich Low_complexity Low_complexity 3 116 0 1123 202 22 45 chr5 21227320 21227519 -181858013 - MER33 DNA MER1_type -2275 310 119 2291 85 13 0 chr5 21227519 21227824 -181857708 - AluSq SINE Alu -4 309 1 1123 202 22 45 chr5 21227824 21227936 -181857596 - MER33 DNA MER1_type -2466 119 6 2035 86 39 0 chr5 21227989 21228269 -181857263 + AluSx SINE Alu 11 301 -11 1901 110 30 7 chr5 21228468 21228768 -181856764 + AluSq SINE Alu 1 307 -6 2120 120 0 0 chr5 21228832 21229141 -181856391 + AluSx SINE Alu 1 309 -3 2038 111 31 0 chr5 21229858 21230147 -181855385 - AluSx SINE Alu -14 298 1 1017 130 65 16 chr5 21231158 21231343 -181854189 - AluSq SINE Alu 0 313 120 903 97 60 8 chr5 21231782 21231916 -181853616 - AluSq SINE Alu -170 143 3 226 217 17 17 chr5 21231979 21232039 -181853493 - L2 LINE L2 0 3313 3254 510 252 31 117 chr5 21232126 21232245 -181853287 - MIR SINE MIR 0 262 169 2070 84 7 14 chr5 21232245 21232530 -181853002 + AluSg SINE Alu 3 285 -25 510 252 31 117 chr5 21232530 21232632 -181852900 - MIR SINE MIR -93 169 60 2788 209 49 17 chr5 21233020 21233765 -181851767 + MER21B LTR ERV1 1 816 -47 2360 58 0 0 chr5 21233765 21234058 -181851474 + AluY SINE Alu 1 293 -18 2788 209 49 17 chr5 21234058 21234087 -181851445 + MER21B LTR ERV1 816 843 -20 194 0 39 0 chr5 21234649 21234675 -181850857 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 678 222 151 5 chr5 21235433 21235618 -181849914 - MER20 DNA MER1_type -5 214 3 2236 102 0 6 chr5 21235947 21236261 -181849271 + AluSx SINE Alu 1 312 0 202 297 81 27 chr5 21236362 21236436 -181849096 - MIR SINE MIR -183 79 2 1876 125 7 14 chr5 21237069 21237357 -181848175 + AluSx SINE Alu 1 286 -26 1986 109 36 0 chr5 21237364 21237662 -181847870 + AluSx SINE Alu 1 308 0 1284 160 15 0 chr5 21237914 21238120 -181847412 + L1MB5 LINE L1 5819 6027 -147 2477 107 3 50 chr5 21238134 21238345 -181847187 - THE1B LTR MaLR 0 364 177 2029 104 7 3 chr5 21238345 21238642 -181846890 + AluSg SINE Alu 1 298 -12 2477 107 3 50 chr5 21238642 21238812 -181846720 - THE1B LTR MaLR -187 177 1 2357 162 29 5 chr5 21238821 21239229 -181846303 + MSTB1 LTR MaLR 15 432 0 611 203 55 3 chr5 21239232 21239387 -181846145 + L1MB5 LINE L1 6022 6184 0 263 286 58 56 chr5 21239437 21239559 -181845973 - MIR SINE MIR -78 130 28 233 277 118 8 chr5 21239566 21239685 -181845847 + MIR SINE MIR 130 261 -1 620 295 34 54 chr5 21239716 21239979 -181845553 - MIR SINE MIR -5 257 3 476 183 0 0 chr5 21240183 21240265 -181845267 + FLAM SINE Alu 45 126 -17 1154 84 168 45 chr5 21240483 21240570 -181844962 - MER30 DNA MER1_type 0 230 155 1762 169 3 0 chr5 21240570 21240872 -181844660 + AluJb SINE Alu 2 304 -8 2275 79 10 0 chr5 21240874 21241166 -181844366 + AluSq SINE Alu 1 295 -18 198 0 0 0 chr5 21241171 21241193 -181844339 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1154 84 168 45 chr5 21241193 21241298 -181844234 - MER30 DNA MER1_type -78 152 4 486 230 40 40 chr5 21241315 21241467 -181844065 + Charlie8 DNA MER1_type 28 179 -2238 459 0 0 0 chr5 21241921 21241972 -181843560 + (CA)n Simple_repeat Simple_repeat 1 51 0 254 294 37 28 chr5 21244134 21244243 -181841289 + MIR3 SINE MIR 65 174 -34 2200 102 0 3 chr5 21244795 21245100 -181840432 + AluSx SINE Alu 1 304 -8 216 0 0 0 chr5 21245527 21245551 -181839981 + (A)n Simple_repeat Simple_repeat 1 24 0 1036 210 19 5 chr5 21246456 21246670 -181838862 - MER20 DNA MER1_type 0 219 3 1240 185 3 70 chr5 21246694 21247007 -181838525 + AluJo SINE Alu 1 292 -20 2401 84 6 0 chr5 21247614 21247925 -181837607 - AluSp SINE Alu 0 313 1 180 274 73 48 chr5 21248094 21248218 -181837314 - L3 LINE CR1 -155 1422 1296 2063 125 0 3 chr5 21248219 21248530 -181837002 + AluSx SINE Alu 1 310 -2 798 294 9 5 chr5 21248568 21248782 -181836750 + MIR SINE MIR 34 248 -14 2042 127 0 13 chr5 21248819 21248955 -181836577 + AluSx SINE Alu 1 137 -175 2177 109 0 0 chr5 21248955 21249249 -181836283 + AluSc SINE Alu 1 294 -15 2042 127 0 13 chr5 21249249 21249427 -181836105 + AluSx SINE Alu 137 311 -1 1492 243 120 24 chr5 21249442 21249947 -181835585 + L1MD3 LINE L1 5791 7977 -18 2104 92 3 3 chr5 21249960 21250287 -181835245 + AluSx SINE Alu 1 327 0 213 121 0 0 chr5 21250752 21250785 -181834747 + (A)n Simple_repeat Simple_repeat 1 33 0 726 178 64 99 chr5 21250862 21251064 -181834468 + MER20 DNA MER1_type 1 195 -24 2226 88 3 0 chr5 21251067 21251363 -181834169 + AluSx SINE Alu 1 297 -15 1849 168 0 0 chr5 21251883 21252192 -181833340 + AluJb SINE Alu 1 309 -3 2338 64 3 3 chr5 21252425 21252721 -181832811 - AluY SINE Alu -15 296 1 303 71 0 0 chr5 21252788 21252830 -181832702 + (CA)n Simple_repeat Simple_repeat 2 43 0 1694 186 0 0 chr5 21252945 21253246 -181832286 + AluJo SINE Alu 1 301 -11 363 228 124 41 chr5 21253627 21253772 -181831760 + L1ME LINE L1 5600 5756 -365 1396 198 98 76 chr5 21253861 21253968 -181831564 + Zaphod DNA AcHobo 2786 2889 -1142 2458 60 0 3 chr5 21253968 21254270 -181831262 - AluY SINE Alu -10 301 1 1396 198 98 76 chr5 21254270 21254606 -181830926 + Zaphod DNA AcHobo 2889 3246 -785 1825 94 0 4 chr5 21254606 21254851 -181830681 - AluSq SINE Alu -69 244 1 1396 198 98 76 chr5 21254851 21254958 -181830574 + Zaphod DNA AcHobo 3246 3349 -682 631 168 154 0 chr5 21254971 21255114 -181830418 - MER46A DNA MER2_type -9 227 63 638 209 87 15 chr5 21255114 21255310 -181830222 + L1MA4 LINE L1 6086 6295 -5 356 180 0 0 chr5 21255320 21255381 -181830151 - MER46A DNA MER2_type -175 61 1 1952 206 136 22 chr5 21255382 21255559 -181829973 + Zaphod DNA AcHobo 3349 3504 -527 1846 165 0 0 chr5 21255559 21255862 -181829670 + AluSx SINE Alu 1 303 -9 1952 206 136 22 chr5 21255862 21256286 -181829246 + Zaphod DNA AcHobo 3504 4019 -12 2242 73 0 0 chr5 21256444 21256761 -181828771 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 21257320 21257349 -181828183 + AT_rich Low_complexity Low_complexity 1 29 0 1713 97 58 0 chr5 21257358 21257616 -181827916 - AluSx SINE Alu -25 287 15 2091 118 0 0 chr5 21257701 21258006 -181827526 + AluY SINE Alu 1 305 -6 2456 50 0 3 chr5 21258089 21258392 -181827140 - AluY SINE Alu -9 302 1 1067 219 13 17 chr5 21258590 21258828 -181826704 + MIR SINE MIR 1 237 -25 389 215 0 0 chr5 21258830 21258895 -181826637 + MER2 DNA MER2_type 1 65 -280 * 637 127 85 42 chr5 21258890 21259008 -181826524 + MER2 DNA MER2_type 223 345 0 187 293 181 17 chr5 21259786 21259902 -181825630 - MIR SINE MIR -15 247 113 2237 78 3 0 chr5 21260129 21260445 -181825087 + AluSp SINE Alu 1 317 0 252 210 16 48 chr5 21261472 21261534 -181823998 - L2 LINE L2 -18 3295 3236 1431 137 125 0 chr5 21261937 21262193 -181823339 - AluJb SINE Alu -24 288 1 916 205 95 0 chr5 21262287 21262487 -181823045 + MER20 DNA MER1_type 1 219 0 195 281 37 37 chr5 21263111 21263193 -181822339 + MIR3 SINE MIR 93 174 -34 30 0 0 0 chr5 21264603 21264633 -181820899 + GC_rich Low_complexity Low_complexity 1 30 0 279 217 0 89 chr5 21265436 21265593 -181819939 + (CCCCG)n Simple_repeat Simple_repeat 1 143 0 188 294 118 0 chr5 21266411 21266479 -181819053 + MER5C DNA MER1_type 248 323 -1 225 159 0 101 chr5 21266492 21266561 -181818971 + L2 LINE L2 2989 3050 -222 926 146 35 12 chr5 21267177 21267348 -181818184 + L1MC2 LINE L1 6168 6342 -2 348 247 94 47 chr5 21269745 21269830 -181815702 + MER45A DNA AcHobo 1 89 -89 1155 36 0 0 chr5 21269936 21270076 -181815456 + (TTCC)n Simple_repeat Simple_repeat 4 143 0 1819 103 14 14 chr5 21270076 21270357 -181815175 - AluSq SINE Alu -32 281 1 200 151 0 38 chr5 21270652 21270705 -181814827 + T-rich Low_complexity Low_complexity 3 53 0 1562 153 42 39 chr5 21271144 21271452 -181814080 - AluJo SINE Alu -3 309 1 401 206 0 0 chr5 21271683 21271756 -181813776 - MER45A DNA AcHobo -4 174 102 2186 106 0 10 chr5 21271759 21272070 -181813462 + AluSx SINE Alu 1 308 -4 627 204 0 0 chr5 21272084 21272192 -181813340 + FRAM SINE Alu 8 115 -61 641 159 0 19 chr5 21272216 21272323 -181813209 + U6 snRNA snRNA 1 105 -2 2088 118 0 3 chr5 21272351 21272656 -181812876 + AluSq SINE Alu 1 304 -9 2159 66 0 11 chr5 21272664 21272950 -181812582 + AluY SINE Alu 1 283 -28 1288 59 71 0 chr5 21272956 21273126 -181812406 - AluY SINE Alu -128 183 2 1233 142 20 32 chr5 21273137 21273390 -181812142 - L1MA3 LINE L1 0 6305 6056 404 242 117 62 chr5 21273430 21273558 -181811974 - MER45 DNA AcHobo -71 107 1 941 146 35 12 chr5 21275955 21276126 -181809406 - L1MC2 LINE L1 -2 6342 6168 225 159 0 101 chr5 21276742 21276811 -181808721 - L2 LINE L2 -222 3050 2989 188 294 118 0 chr5 21276824 21276892 -181808640 - MER5C DNA MER1_type -1 323 248 279 217 0 89 chr5 21277710 21277867 -181807665 + (CGGGG)n Simple_repeat Simple_repeat 1 143 0 30 0 0 0 chr5 21278670 21278700 -181806832 + GC_rich Low_complexity Low_complexity 1 30 0 195 281 37 37 chr5 21280109 21280191 -181805341 - MIR3 SINE MIR -34 174 93 916 205 95 0 chr5 21280815 21281015 -181804517 - MER20 DNA MER1_type 0 219 1 1444 137 125 0 chr5 21281109 21281365 -181804167 + AluJb SINE Alu 1 288 -24 252 210 16 48 chr5 21281772 21281834 -181803698 + L2 LINE L2 3236 3295 -18 2245 78 3 0 chr5 21282863 21283179 -181802353 - AluSp SINE Alu 0 317 1 200 293 181 17 chr5 21283406 21283522 -181802010 + MIR SINE MIR 113 247 -15 637 127 85 42 chr5 21284300 21284418 -181801114 - MER2 DNA MER2_type 0 345 223 389 215 0 0 chr5 21284413 21284478 -181801054 - MER2 DNA MER2_type -280 65 1 * 1088 214 13 17 chr5 21284480 21284718 -181800814 - MIR SINE MIR -25 237 1 2215 50 0 4 chr5 21284916 21285195 -181800337 + AluY SINE Alu 1 278 -33 198 0 0 0 chr5 21285195 21285217 -181800315 + (CA)n Simple_repeat Simple_repeat 1 22 0 1801 162 0 22 chr5 21286111 21286425 -181799107 - AluJb SINE Alu -5 307 1 317 294 42 34 chr5 21287174 21287293 -181798239 - MIR SINE MIR -59 203 84 230 132 19 0 chr5 21287497 21287550 -181797982 + (TA)n Simple_repeat Simple_repeat 1 54 0 1624 187 0 3 chr5 21287550 21287839 -181797693 - AluJb SINE Alu -20 292 5 779 267 20 0 chr5 21288121 21288316 -181797216 - MER58A DNA MER1_type 0 224 26 5367 84 95 4 chr5 21288968 21289725 -181795807 + LTR12 LTR ERV1 1 826 0 1713 141 20 17 chr5 21289963 21290260 -181795272 - AluSx SINE Alu -14 298 1 304 271 226 0 chr5 21290291 21290424 -181795108 + MER5A DNA MER1_type 14 176 -13 303 324 38 9 chr5 21290519 21290624 -181794908 - MER5A DNA MER1_type -35 154 47 227 320 86 23 chr5 21290520 21290648 -181794884 + MER5A DNA MER1_type 47 182 -7 * 2077 80 0 28 chr5 21290753 21291041 -181794491 - AluSc SINE Alu -14 295 16 823 0 63 0 chr5 21291716 21291843 -181793689 + (TA)n Simple_repeat Simple_repeat 2 136 0 1875 128 0 20 chr5 21291918 21292222 -181793310 + AluJb SINE Alu 1 298 -14 414 0 0 0 chr5 21292227 21292273 -181793259 + (CA)n Simple_repeat Simple_repeat 2 47 0 2090 109 3 0 chr5 21292420 21292723 -181792809 - AluSx SINE Alu -8 304 1 2488 33 0 13 chr5 21292930 21293230 -181792302 - AluY SINE Alu -15 296 1 309 89 0 0 chr5 21293451 21293496 -181792036 + (T)n Simple_repeat Simple_repeat 1 45 0 340 137 0 0 chr5 21293498 21293549 -181791983 - MER4E LTR ERV1 -66 700 650 1694 183 0 3 chr5 21293669 21293980 -181791552 - AluJo SINE Alu -2 310 1 482 270 72 69 chr5 21293991 21294073 -181791459 - HAL1b LINE L1 -1 1347 1267 2295 70 0 20 chr5 21294073 21294373 -181791159 + AluY SINE Alu 1 294 -17 482 270 72 69 chr5 21294373 21294608 -181790924 - HAL1b LINE L1 -81 1267 1029 289 167 30 121 chr5 21294624 21294699 -181790833 - HAL1b LINE L1 -535 813 753 1625 151 19 45 chr5 21294699 21294871 -181790661 - AluSx SINE Alu -9 303 141 2485 56 0 0 chr5 21294871 21295176 -181790356 - AluY SINE Alu -6 305 1 1625 151 19 45 chr5 21295176 21295314 -181790218 - AluSx SINE Alu -171 141 1 289 167 30 121 chr5 21295314 21295370 -181790162 - HAL1b LINE L1 -595 753 694 482 217 80 7 chr5 21295380 21295518 -181790014 - HAL1b LINE L1 -782 566 419 2184 94 3 3 chr5 21295529 21295837 -181789695 + AluY SINE Alu 1 308 -3 898 185 0 22 chr5 21295846 21296024 -181789508 + AluJb SINE Alu 133 306 -6 297 197 0 0 chr5 21296024 21296085 -181789447 + GA-rich Low_complexity Low_complexity 1 61 0 253 133 50 17 chr5 21296165 21296225 -181789307 + GA-rich Low_complexity Low_complexity 2 63 0 268 330 88 21 chr5 21296249 21296488 -181789044 - HAL1b LINE L1 -1005 343 89 243 265 161 108 chr5 21296720 21296872 -181788660 + MIR SINE MIR 1 144 -118 2341 77 0 6 chr5 21296872 21297185 -181788347 + AluY SINE Alu 1 311 0 243 265 161 108 chr5 21297185 21297213 -181788319 + MIR SINE MIR 144 169 -93 2290 78 0 10 chr5 21297213 21297522 -181788010 + AluY SINE Alu 1 306 -5 243 265 161 108 chr5 21297522 21297589 -181787943 + MIR SINE MIR 169 262 0 1515 176 10 17 chr5 21298400 21298701 -181786831 - AluJo SINE Alu -13 299 1 1919 139 0 0 chr5 21298818 21299131 -181786401 - AluSx SINE Alu 0 313 1 612 161 18 17 chr5 21299133 21299250 -181786282 - MLT1A1 LTR MaLR -11 374 250 655 131 49 33 chr5 21299261 21299383 -181786149 - MLT1A1 LTR MaLR -241 124 1 1661 144 4 0 chr5 21299635 21299891 -181785641 + AluSx SINE Alu 38 294 -18 392 275 93 103 chr5 21300102 21300393 -181785139 - L2 LINE L2 -844 2470 2183 1585 143 14 29 chr5 21300420 21300700 -181784832 + AluJo SINE Alu 1 276 -36 220 121 0 0 chr5 21300914 21300947 -181784585 + MER5A DNA MER1_type 138 170 -19 2022 104 7 14 chr5 21301091 21301380 -181784152 + AluSg SINE Alu 1 287 -23 259 43 22 22 chr5 21301383 21301429 -181784103 + (TG)n Simple_repeat Simple_repeat 1 46 0 1614 108 0 0 chr5 21301441 21301664 -181783868 + AluSq SINE Alu 1 223 -90 688 170 7 64 chr5 21301845 21301986 -181783546 + FLAM_C SINE Alu 1 133 0 2542 3 0 0 chr5 21302020 21302333 -181783199 + AluY SINE Alu 1 313 0 533 298 193 12 chr5 21302677 21303003 -181782529 - L3 LINE CR1 -24 1553 1169 2109 102 14 0 chr5 21303055 21303350 -181782182 - AluSp SINE Alu -14 299 1 1509 164 54 11 chr5 21303380 21303660 -181781872 + AluJo SINE Alu 1 292 -20 947 153 7 0 chr5 21303665 21303815 -181781717 - MLT1D LTR MaLR 0 505 355 975 179 31 20 chr5 21303846 21304041 -181781491 - MLT1D LTR MaLR -308 197 1 265 330 21 10 chr5 21304054 21304151 -181781381 - L3 LINE CR1 -595 982 885 632 197 210 108 chr5 21304165 21304536 -181780996 + MLT1I LTR MaLR 1 409 0 1877 108 32 4 chr5 21304559 21304838 -181780694 - AluSc SINE Alu -22 287 1 2239 75 3 36 chr5 21304850 21305157 -181780375 - AluSp SINE Alu -16 297 1 379 133 0 0 chr5 21305184 21305249 -181780283 - Alu SINE Alu -256 46 1 2065 114 0 3 chr5 21305417 21305715 -181779817 - AluSg SINE Alu -13 297 1 183 374 86 16 chr5 21305750 21305937 -181779595 - L3 LINE CR1 -1164 413 214 1467 203 0 7 chr5 21305977 21306273 -181779259 + AluSx SINE Alu 1 294 -18 2136 70 13 46 chr5 21306278 21306580 -181778952 - AluY SINE Alu -19 292 1 939 108 51 6 chr5 21306968 21307125 -181778407 + AluY SINE Alu 129 292 -19 1467 203 0 7 chr5 21307130 21307426 -181778106 - AluSx SINE Alu -18 294 1 183 374 86 16 chr5 21307466 21307653 -181777879 + L3 LINE CR1 214 413 -1164 2325 68 0 3 chr5 21307688 21307995 -181777537 + AluSg SINE Alu 1 306 -4 1815 148 33 0 chr5 21308096 21308399 -181777133 + AluSp SINE Alu 1 313 0 720 186 8 0 chr5 21308452 21308576 -181776956 - FLAM_C SINE Alu -17 126 2 201 373 0 15 chr5 21308646 21308713 -181776819 + MIR SINE MIR 3 68 -194 389 273 67 62 chr5 21308756 21308898 -181776634 + MIR SINE MIR 57 197 -65 2198 89 0 10 chr5 21308898 21309200 -181776332 + AluSg SINE Alu 1 299 -11 2186 105 0 0 chr5 21309202 21309497 -181776035 + AluSg SINE Alu 2 296 -14 389 273 67 62 chr5 21309497 21309545 -181775987 + MIR SINE MIR 197 251 -11 1039 183 10 14 chr5 21310678 21310886 -181774646 - MER45B DNA AcHobo 0 1040 834 939 66 0 0 chr5 21310886 21311007 -181774525 + AluY SINE Alu 175 295 -16 574 110 0 44 chr5 21311019 21311110 -181774422 - AluSc SINE Alu -13 296 210 1539 97 0 0 chr5 21311168 21311375 -181774157 + AluSq SINE Alu 12 218 -95 357 109 0 0 chr5 21311376 21311431 -181774101 + (GGGAA)n Simple_repeat Simple_repeat 4 58 0 239 93 70 0 chr5 21311431 21311474 -181774058 - MER45B DNA AcHobo -261 779 734 2490 194 104 75 chr5 21311482 21311581 -181773951 - MER45B DNA AcHobo -261 779 684 1443 208 7 10 chr5 21311581 21311870 -181773662 + AluJo SINE Alu 1 288 -24 2490 194 104 75 chr5 21311870 21311900 -181773632 - MER45B DNA AcHobo -356 684 656 2179 123 39 28 chr5 21311900 21312258 -181773274 - THE1B LTR MaLR -2 362 1 2490 194 104 75 chr5 21312258 21312884 -181772648 - MER45B DNA AcHobo -384 656 1 713 130 0 0 chr5 21313129 21313229 -181772303 + AluJ/FLAM SINE Alu 2 101 -211 1890 107 50 0 chr5 21313267 21313547 -181771985 - AluSg SINE Alu -14 296 3 32 0 0 0 chr5 21313552 21313584 -181771948 + AT_rich Low_complexity Low_complexity 1 32 0 2286 74 3 3 chr5 21313790 21314089 -181771443 + AluSg SINE Alu 2 300 -10 595 135 0 29 chr5 21314119 21314223 -181771309 - MER53 DNA DNA -88 101 1 1915 143 27 0 chr5 21314394 21314695 -181770837 + AluJb SINE Alu 1 309 -3 1619 207 139 20 chr5 21314823 21315282 -181770250 - MER69 DNA AcHobo -3 2523 2010 23 33 0 0 chr5 21315363 21315393 -181770139 + AT_rich Low_complexity Low_complexity 1 30 0 2459 39 3 26 chr5 21315394 21315704 -181769828 - AluY SINE Alu -8 303 1 2178 98 7 0 chr5 21315756 21316062 -181769470 - AluSc SINE Alu -1 308 1 686 126 0 0 chr5 21316062 21316157 -181769375 - AluJb SINE Alu -17 295 201 559 272 125 66 chr5 21316167 21316293 -181769239 - MER69 DNA AcHobo -763 463 346 1560 191 0 10 chr5 21316293 21316587 -181768945 + AluJb SINE Alu 1 291 -21 1941 89 0 41 chr5 21316592 21316927 -181768605 + AluSg SINE Alu 1 323 0 559 272 125 66 chr5 21316927 21316969 -181768563 - MER69 DNA AcHobo -883 343 305 1868 141 10 0 chr5 21316969 21317259 -181768273 - AluJb SINE Alu -19 293 1 2037 152 75 15 chr5 21317260 21317649 -181767883 + MLT2D LTR ERVL 3 414 0 559 272 125 66 chr5 21317649 21317878 -181767654 - MER69 DNA AcHobo -920 306 32 2550 131 81 2 chr5 21317917 21318314 -181767218 - LTR12 LTR ERV1 -234 480 53 253 231 0 0 chr5 21318314 21318366 -181767166 - LTR30 LTR ERV1 -670 52 1 595 277 55 82 chr5 21318420 21318588 -181766944 + L2 LINE L2 1537 1693 -1621 1987 118 3 3 chr5 21318588 21318885 -181766647 - AluSx SINE Alu -15 297 1 595 277 55 82 chr5 21318885 21319044 -181766488 + L2 LINE L2 1693 1855 -1459 251 192 121 61 chr5 21319078 21319177 -181766355 + MLT1J LTR MaLR 374 478 -33 21 36 0 0 chr5 21319281 21319309 -181766223 + AT_rich Low_complexity Low_complexity 1 28 0 1810 172 0 104 chr5 21319350 21319594 -181765938 - MLT1B LTR MaLR -4 386 205 2022 130 0 0 chr5 21319594 21319887 -181765645 - AluSg SINE Alu -17 293 1 1810 172 0 104 chr5 21319887 21320073 -181765459 - MLT1B LTR MaLR -185 205 1 1582 178 0 4 chr5 21320121 21320402 -181765130 + AluJo SINE Alu 21 300 -12 300 300 53 53 chr5 21320431 21320601 -181764931 - L1MEd LINE L1 -5643 476 307 1538 151 134 35 chr5 21320710 21320995 -181764537 - L1MC2 LINE L1 0 7995 7740 2116 100 28 0 chr5 21320995 21321286 -181764246 - AluSc SINE Alu -10 299 1 1538 151 134 35 chr5 21321286 21321361 -181764171 - L1MC2 LINE L1 -255 7740 6264 1807 124 7 0 chr5 21321382 21321657 -181763875 - AluSx SINE Alu -2 310 34 28 0 0 0 chr5 21321834 21321862 -181763670 + AT_rich Low_complexity Low_complexity 1 28 0 1204 179 93 7 chr5 21322558 21322838 -181762694 - AluJo SINE Alu -8 304 1 349 250 235 50 chr5 21322841 21323041 -181762491 - MIR SINE MIR -6 256 20 247 293 25 83 chr5 21323113 21323230 -181762302 + MIR SINE MIR 83 190 -72 2452 52 0 3 chr5 21323230 21323539 -181761993 + AluY SINE Alu 1 308 -3 247 293 25 83 chr5 21323539 21323578 -181761954 + MIR SINE MIR 190 230 -32 1215 114 0 47 chr5 21323609 21323845 -181761687 + AluSx SINE Alu 1 225 -87 1937 110 0 0 chr5 21324813 21325077 -181760455 - AluSg SINE Alu -45 265 2 2190 90 0 10 chr5 21325079 21325380 -181760152 - AluSg SINE Alu -12 298 1 401 290 94 7 chr5 21325384 21325522 -181760010 - MIR SINE MIR -56 206 57 201 373 0 15 chr5 21325565 21325632 -181759900 - MIR SINE MIR -194 68 3 720 186 8 0 chr5 21325708 21325832 -181759700 + FLAM_C SINE Alu 2 126 -17 1845 145 33 0 chr5 21325885 21326188 -181759344 - AluSp SINE Alu 0 313 1 2587 26 3 16 chr5 21326289 21326599 -181758933 - AluY SINE Alu -5 306 1 2131 118 3 7 chr5 21326607 21326912 -181758620 - AluSq SINE Alu -9 304 1 646 159 0 19 chr5 21326940 21327047 -181758485 - U6 snRNA snRNA -2 105 1 602 193 0 9 chr5 21327071 21327180 -181758352 - FRAM SINE Alu -61 115 8 2314 106 0 10 chr5 21327194 21327505 -181758027 - AluSx SINE Alu -4 308 1 403 206 0 0 chr5 21327508 21327581 -181757951 + MER45A DNA AcHobo 102 174 -4 1675 153 42 39 chr5 21327812 21328120 -181757412 + AluJo SINE Alu 1 309 -3 200 151 0 38 chr5 21328559 21328612 -181756920 + A-rich Low_complexity Low_complexity 3 53 0 1979 121 13 16 chr5 21328907 21329188 -181756344 + AluSq SINE Alu 1 282 -31 1103 42 0 7 chr5 21329188 21329330 -181756202 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 1979 121 13 16 chr5 21329330 21329362 -181756170 + AluSq SINE Alu 282 313 0 280 288 0 0 chr5 21329370 21329450 -181756082 + L1MC/D LINE L1 5722 5801 -2007 323 271 224 47 chr5 21329453 21329821 -181755711 - MLT1H LTR MaLR 0 549 101 1551 153 113 11 chr5 21329821 21330095 -181755437 - AluSx SINE Alu -10 302 1 323 271 224 47 chr5 21330095 21330132 -181755400 - MLT1H LTR MaLR -448 101 72 1761 181 62 8 chr5 21330161 21330515 -181755017 - L1MB5 LINE L1 -13 6161 5789 915 151 87 6 chr5 21330531 21330703 -181754829 - MER30 DNA MER1_type -44 186 1 1341 131 100 0 chr5 21330703 21330932 -181754600 - L1MB5 LINE L1 -378 5796 5545 1353 66 52 104 chr5 21331064 21331135 -181754397 + AluSg/x SINE Alu 82 155 -156 2165 121 3 3 chr5 21331135 21331441 -181754091 + AluSx SINE Alu 1 306 -6 1353 66 52 104 chr5 21331441 21331610 -181753922 + AluSg/x SINE Alu 155 311 0 820 144 0 8 chr5 21331660 21331778 -181753754 + FLAM_C SINE Alu 2 118 -25 27 0 0 48 chr5 21331778 21331804 -181753728 + AT_rich Low_complexity Low_complexity 1 26 -14 2159 141 126 8 chr5 21331804 21332186 -181753346 + MSTA LTR MaLR 2 428 0 27 0 0 48 chr5 21332186 21332201 -181753331 + AT_rich Low_complexity Low_complexity 26 40 0 437 152 13 38 chr5 21332381 21332460 -181753072 + THE1C LTR MaLR 299 375 0 1541 131 11 69 chr5 21332460 21332735 -181752797 + MLT1B LTR MaLR 132 390 0 268 411 58 5 chr5 21332735 21332942 -181752590 - L2 LINE L2 -214 3058 2841 442 271 47 0 chr5 21332989 21333096 -181752436 + MER63 DNA MER1_type 2 739 -97 2392 89 0 16 chr5 21333099 21333414 -181752118 - AluY SINE Alu -1 310 1 1048 186 4 26 chr5 21333772 21334003 -181751529 - AluJb SINE Alu -2 310 85 1439 96 216 24 chr5 21334003 21334253 -181751279 - AluSg1 SINE Alu -7 302 5 310 243 77 163 chr5 21334292 21334630 -181750902 + L2 LINE L2 2834 3199 -114 790 267 42 9 chr5 21334630 21334847 -181750685 + MER58A DNA MER1_type 1 224 0 310 243 77 163 chr5 21334847 21334872 -181750660 + L2 LINE L2 3199 3225 -88 1742 130 102 128 chr5 21334872 21335047 -181750485 + MSTA LTR MaLR 1 179 -249 2100 121 0 0 chr5 21335047 21335328 -181750204 + AluSg SINE Alu 1 281 -29 1742 130 102 128 chr5 21335328 21335355 -181750177 + MSTA LTR MaLR 179 205 -223 2247 105 0 3 chr5 21335355 21335651 -181749881 + AluSx SINE Alu 1 295 -17 1742 130 102 128 chr5 21335651 21335819 -181749713 + MSTA LTR MaLR 205 362 -66 2344 100 0 7 chr5 21335819 21336128 -181749404 + AluSx SINE Alu 1 307 -5 1742 130 102 128 chr5 21336128 21336194 -181749338 + MSTA LTR MaLR 362 428 0 310 243 77 163 chr5 21336194 21336307 -181749225 + L2 LINE L2 3225 3270 -43 2542 52 0 10 chr5 21336338 21336646 -181748886 + AluY SINE Alu 1 305 -6 498 170 0 0 chr5 21336761 21336855 -181748677 + (TG)n Simple_repeat Simple_repeat 2 95 0 382 159 14 14 chr5 21336870 21336939 -181748593 - FRAM SINE Alu -29 137 69 707 228 41 0 chr5 21337077 21337248 -181748284 + MER58A DNA MER1_type 47 224 0 1736 187 0 3 chr5 21337529 21337818 -181747714 + AluJb SINE Alu 5 292 -20 211 130 37 0 chr5 21337818 21337872 -181747660 + (TA)n Simple_repeat Simple_repeat 1 56 0 269 294 42 34 chr5 21338076 21338195 -181747337 + MIR SINE MIR 84 203 -59 1917 162 0 22 chr5 21338944 21339258 -181746274 + AluJb SINE Alu 1 307 -5 198 0 0 0 chr5 21340152 21340174 -181745358 + (TG)n Simple_repeat Simple_repeat 1 22 0 2019 84 3 25 chr5 21340174 21340458 -181745074 - AluY SINE Alu -33 278 1 1993 90 4 0 chr5 21340590 21340835 -181744697 + AluSp SINE Alu 1 246 -67 3781 126 40 30 chr5 21340835 21341496 -181744036 - pTR5 LTR ERV1 -7 2431 366 894 191 4 49 chr5 21341596 21341821 -181743711 - pTR5 LTR ERV1 -1481 957 743 413 56 0 0 chr5 21341821 21341875 -181743657 + AluSp SINE Alu 243 296 -17 2060 97 57 17 chr5 21342025 21342324 -181743208 + AluSq SINE Alu 1 311 -2 2473 84 3 3 chr5 21343132 21343441 -181742091 - AluSx SINE Alu -3 309 1 212 309 0 56 chr5 21343703 21343829 -181741703 + GA-rich Low_complexity Low_complexity 4 122 0 2252 120 7 0 chr5 21344058 21344366 -181741166 + AluSx SINE Alu 1 310 -2 1785 148 56 3 chr5 21344377 21344661 -181740871 + AluJo SINE Alu 1 299 -13 1312 157 0 5 chr5 21346544 21346748 -181738784 - AluJo SINE Alu -24 288 86 2318 91 3 58 chr5 21346827 21346959 -181738573 + L1PB1 LINE L1 5809 5947 -204 2493 63 0 0 chr5 21346959 21347258 -181738274 + AluY SINE Alu 3 301 -10 2318 91 3 58 chr5 21347258 21347488 -181738044 + L1PB1 LINE L1 5947 6151 0 2529 53 0 7 chr5 21347889 21348193 -181737339 + AluY SINE Alu 1 302 -9 1971 143 6 22 chr5 21348380 21348694 -181736838 - AluJo SINE Alu -3 309 1 2376 94 0 3 chr5 21348827 21349134 -181736398 + AluSc SINE Alu 1 306 -3 1654 142 40 0 chr5 21349134 21349381 -181736151 + AluSq SINE Alu 1 257 -56 2276 67 42 0 chr5 21349503 21349787 -181735745 - AluY SINE Alu -15 296 1 665 170 64 38 chr5 21349788 21349979 -181735553 + L1MB3 LINE L1 5914 6104 -71 2051 146 0 0 chr5 21350677 21350978 -181734554 + AluSx SINE Alu 9 309 -3 625 275 59 13 chr5 21351237 21351473 -181734059 + MIR SINE MIR 15 261 -1 1181 248 77 57 chr5 21351943 21352175 -181733357 - L1MC5 LINE L1 -219 7742 7516 1632 157 44 31 chr5 21352175 21352468 -181733064 - AluJo SINE Alu -14 298 2 1181 248 77 57 chr5 21352468 21352888 -181732644 - L1MC5 LINE L1 -445 7516 7077 1465 113 34 0 chr5 21352933 21353137 -181732395 - AluSg/x SINE Alu -6 304 94 21 0 0 0 chr5 21353278 21353299 -181732233 + AT_rich Low_complexity Low_complexity 1 21 0 2443 89 0 6 chr5 21353690 21354004 -181731528 + AluSq SINE Alu 1 312 -1 1087 192 63 120 chr5 21355506 21355588 -181729944 - LTR52 LTR ERVL -3 418 333 1705 119 55 0 chr5 21355588 21355823 -181729709 - AluSx SINE Alu -32 280 33 1087 192 63 120 chr5 21355823 21356183 -181729349 - LTR52 LTR ERVL -88 333 1 185 56 0 56 chr5 21356341 21356377 -181729155 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 2326 77 0 45 chr5 21356426 21356736 -181728796 + AluY SINE Alu 1 296 -15 2201 95 14 0 chr5 21356982 21357267 -181728265 + AluSx SINE Alu 1 289 -23 194 301 157 12 chr5 21357271 21357354 -181728178 - MIR3 SINE MIR -31 177 83 403 155 48 128 chr5 21357737 21357757 -181727775 - L1MC1 LINE L1 0 7769 7749 2308 98 0 3 chr5 21357757 21358054 -181727478 + AluSq SINE Alu 1 296 -17 403 155 48 128 chr5 21358054 21358709 -181726823 - L1MC1 LINE L1 -20 7749 7043 2219 113 0 20 chr5 21358709 21359010 -181726522 - AluSg SINE Alu -15 295 1 403 155 48 128 chr5 21359010 21359181 -181726351 - L1MC1 LINE L1 -726 7043 6132 180 228 0 0 chr5 21359185 21359242 -181726290 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 347 237 6 0 chr5 21359279 21359435 -181726097 + (TCTA)n Simple_repeat Simple_repeat 4 160 0 935 199 26 60 chr5 21359453 21359638 -181725894 - L1MC3 LINE L1 -739 7046 6871 2449 59 13 23 chr5 21359638 21359944 -181725588 - AluY SINE Alu -8 303 1 935 199 26 60 chr5 21359944 21360024 -181725508 - L1MC3 LINE L1 -914 6871 6790 1709 120 11 34 chr5 21360124 21360390 -181725142 - AluSq SINE Alu -53 260 1 1752 178 13 3 chr5 21360612 21360916 -181724616 + AluJb SINE Alu 1 307 -5 1790 159 3 20 chr5 21361500 21361801 -181723731 + AluJo SINE Alu 6 301 -11 672 60 0 0 chr5 21362154 21362237 -181723295 - AluY SINE Alu -11 300 218 1515 66 0 11 chr5 21362237 21362418 -181723114 - AluY SINE Alu -132 179 1 1376 187 79 4 chr5 21362999 21363158 -181722374 - Tigger7 DNA MER2_type -1 2486 2340 2424 92 0 0 chr5 21363158 21363462 -181722070 + AluSx SINE Alu 1 304 -8 1376 187 79 4 chr5 21363462 21363580 -181721952 - Tigger7 DNA MER2_type -147 2340 2188 2164 126 7 7 chr5 21363894 21364204 -181721328 - AluSx SINE Alu -2 310 1 545 203 0 120 chr5 21364324 21364457 -181721075 + FLAM_A SINE Alu 5 121 -12 1118 156 0 0 chr5 21364466 21364639 -181720893 - AluSg/x SINE Alu -3 307 135 1466 158 43 84 chr5 21364661 21364983 -181720549 - AluJb SINE Alu -3 309 1 1544 208 0 3 chr5 21364985 21365269 -181720263 - AluJo SINE Alu -13 299 17 929 133 0 0 chr5 21365441 21365569 -181719963 + FLAM_C SINE Alu 6 133 -10 2464 58 0 19 chr5 21365573 21365884 -181719648 - AluY SINE Alu -6 305 1 1549 182 12 49 chr5 21466408 21466732 -181618800 - AluJb SINE Alu 0 312 1 221 95 0 48 chr5 21466740 21466782 -181618750 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 2045 117 17 3 chr5 21466793 21467084 -181618448 - AluSx SINE Alu -17 295 1 455 92 0 0 chr5 21467329 21467394 -181618138 + MER41B LTR ERV1 483 547 -88 231 211 132 13 chr5 21467514 21467590 -181617942 - L2 LINE L2 -1 3312 3228 2160 104 0 3 chr5 21467598 21467886 -181617646 - AluSx SINE Alu -12 300 14 631 242 163 8 chr5 21467993 21468330 -181617202 - L2 LINE L2 -249 3064 2673 442 261 78 58 chr5 21468902 21469159 -181616373 - MIR SINE MIR 0 262 1 2370 101 0 0 chr5 21469359 21469665 -181615867 - AluY SINE Alu -5 306 1 2319 104 3 0 chr5 21470111 21470419 -181615113 - AluSp SINE Alu -2 311 3 2127 133 0 3 chr5 21470419 21470719 -181614813 - AluJb SINE Alu -11 301 3 27 29 0 0 chr5 21470727 21470761 -181614771 + AT_rich Low_complexity Low_complexity 1 34 0 2270 104 7 3 chr5 21471179 21471478 -181614054 + AluSp SINE Alu 1 300 -13 2185 115 3 0 chr5 21471648 21471943 -181613589 - AluSx SINE Alu -16 296 1 29 0 0 0 chr5 21472151 21472180 -181613352 + AT_rich Low_complexity Low_complexity 1 29 0 29 70 0 0 chr5 21472229 21472286 -181613246 + AT_rich Low_complexity Low_complexity 1 57 0 947 87 109 0 chr5 21472462 21472600 -181612932 + AluSc SINE Alu 150 302 -7 22 35 0 0 chr5 21472926 21472955 -181612577 + AT_rich Low_complexity Low_complexity 1 29 0 257 188 31 0 chr5 21473889 21473953 -181611579 + CT-rich Low_complexity Low_complexity 3 68 0 2289 104 7 3 chr5 21473953 21474262 -181611270 - AluSx SINE Alu -2 310 1 277 211 0 0 chr5 21474720 21474772 -181610760 + LTR30 LTR ERV1 1 52 -670 1258 105 4 81 chr5 21474772 21474998 -181610534 + LTR12 LTR ERV1 94 284 -430 397 238 10 0 chr5 21474998 21475099 -181610433 + LTR30 LTR ERV1 552 653 -69 618 141 0 0 chr5 21475099 21475191 -181610341 + LTR12 LTR ERV1 623 714 0 957 192 0 6 chr5 21475283 21475450 -181610082 + FRAM SINE Alu 1 166 -10 2173 127 0 7 chr5 21475508 21475808 -181609724 + AluSq SINE Alu 1 298 -15 333 232 0 24 chr5 21476487 21476569 -181608963 - MIR3 SINE MIR -28 180 101 1220 183 46 13 chr5 21477389 21477685 -181607847 - LTR54 LTR ERV1 0 510 177 403 160 53 0 chr5 21477685 21477760 -181607772 - AluSc SINE Alu -143 166 88 361 240 41 25 chr5 21477760 21477881 -181607651 - LTR54B LTR ERV1 -375 123 1 1950 137 3 44 chr5 21478829 21479144 -181606388 + AluSx SINE Alu 1 302 -10 2437 91 0 0 chr5 21479181 21479490 -181606042 + AluY SINE Alu 1 309 -2 1953 125 3 16 chr5 21479585 21479888 -181605644 + AluSx SINE Alu 1 299 -13 822 83 18 0 chr5 21479959 21480068 -181605464 - HY1 scRNA scRNA -1 111 1 2147 114 0 3 chr5 21480555 21480861 -181604671 - AluSx SINE Alu -7 305 1 211 270 0 40 chr5 21481425 21481499 -181604033 + A-rich Low_complexity Low_complexity 4 74 0 2175 59 28 59 chr5 21481562 21481883 -181603649 + AluY SINE Alu 1 311 0 2069 94 3 24 chr5 21481948 21482246 -181603286 + AluSg SINE Alu 1 292 -18 447 284 80 12 chr5 21483143 21483305 -181602227 - MIR SINE MIR -22 240 68 242 325 51 38 chr5 21483375 21483532 -181602000 - L2 LINE L2 -613 2701 2543 1857 94 18 22 chr5 21483544 21483647 -181601885 + AluSq SINE Alu 33 135 -178 2218 75 0 0 chr5 21483647 21483962 -181601570 + AluY SINE Alu 1 315 0 1857 94 18 22 chr5 21483962 21484132 -181601400 + AluSq SINE Alu 135 307 -6 292 260 80 114 chr5 21484372 21484749 -181600783 + LTR16A1 LTR ERVL 2 365 -92 1875 146 37 89 chr5 21484750 21485094 -181600438 + MLT1B LTR MaLR 3 324 -66 1918 98 24 14 chr5 21485094 21485404 -181600128 - AluY SINE Alu 0 311 1 1875 146 37 89 chr5 21485404 21485463 -181600069 + MLT1B LTR MaLR 324 385 -5 460 220 0 10 chr5 21485467 21485567 -181599965 + LTR16A1 LTR ERVL 359 457 0 248 362 39 16 chr5 21486001 21486062 -181599470 + MIR3 SINE MIR 3 61 -147 1923 103 187 27 chr5 21486062 21486431 -181599101 - MSTA LTR MaLR 0 428 1 248 362 39 16 chr5 21486431 21486496 -181599036 + MIR3 SINE MIR 61 132 -76 180 97 0 0 chr5 21486514 21486545 -181598987 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 802 121 17 29 chr5 21487179 21487352 -181598180 + CT-rich Low_complexity Low_complexity 2 172 0 2105 120 0 3 chr5 21487354 21487663 -181597869 - AluSg SINE Alu -2 308 1 2130 97 3 3 chr5 21487839 21488128 -181597404 - AluSc SINE Alu -19 290 2 199 350 87 39 chr5 21488210 21488313 -181597219 + L2 LINE L2 3188 3295 -18 207 278 103 21 chr5 21488428 21488525 -181597007 + L2 LINE L2 3209 3313 0 2011 96 48 3 chr5 21488643 21488934 -181596598 - AluSg SINE Alu -6 304 1 1117 188 38 8 chr5 21489123 21489363 -181596169 + L1ME2 LINE L1 5910 6156 -8 253 355 58 25 chr5 21489628 21489749 -181595783 - MIR3 SINE MIR -78 130 6 430 146 45 0 chr5 21489750 21489860 -181595672 + CT-rich Low_complexity Low_complexity 1 115 0 2018 122 0 3 chr5 21489860 21490146 -181595386 - AluSx SINE Alu -27 285 1 340 303 97 14 chr5 21490198 21490343 -181595189 + MIR SINE MIR 40 196 -66 1853 128 3 3 chr5 21491152 21491476 -181594056 + AluJo SINE Alu 1 324 0 1547 142 4 18 chr5 21492397 21492672 -181592860 - AluJo SINE Alu -11 301 31 5254 81 135 7 chr5 21492672 21493404 -181592128 - LTR12 LTR ERV1 0 826 1 225 176 0 0 chr5 21493404 21493438 -181592094 - AluJo SINE Alu -268 34 1 22 0 0 0 chr5 21493949 21493971 -181591561 + AT_rich Low_complexity Low_complexity 1 22 0 1810 138 7 43 chr5 21494654 21494958 -181590574 + AluJb SINE Alu 1 293 -19 1820 217 127 55 chr5 21495698 21495917 -181589615 - L1MD2 LINE L1 0 6359 6157 189 0 0 0 chr5 21495917 21495938 -181589594 + (TG)n Simple_repeat Simple_repeat 2 22 0 1820 217 127 55 chr5 21495938 21496009 -181589523 - L1MD2 LINE L1 -202 6157 6093 1650 152 7 34 chr5 21496009 21496306 -181589226 + AluJo SINE Alu 1 289 -23 1820 217 127 55 chr5 21496306 21496625 -181588907 - L1MD2 LINE L1 -266 6093 5699 2169 116 3 0 chr5 21496625 21496927 -181588605 - AluSp SINE Alu -10 303 1 1820 217 127 55 chr5 21496927 21496951 -181588581 - L1MD2 LINE L1 -660 5699 5678 1752 145 0 7 chr5 21497078 21497367 -181588165 + AluSx SINE Alu 5 291 -21 22 0 0 0 chr5 21497373 21497395 -181588137 + AT_rich Low_complexity Low_complexity 1 22 0 1001 139 61 139 chr5 21497632 21497789 -181587743 + MER33 DNA MER1_type 8 125 -2460 1370 176 45 48 chr5 21497789 21498102 -181587430 + AluJo SINE Alu 1 312 0 1001 139 61 139 chr5 21498102 21498288 -181587244 + MER33 DNA MER1_type 125 324 0 226 316 0 0 chr5 21498293 21498350 -181587182 - MIR SINE MIR -131 131 75 1100 206 107 69 chr5 21498424 21498788 -181586744 - MSTD LTR MaLR -2 394 17 401 311 115 4 chr5 21499179 21499414 -181586118 - MIR SINE MIR 0 262 2 2243 101 0 3 chr5 21499602 21499910 -181585622 - AluSp SINE Alu -6 307 1 2395 62 0 0 chr5 21499921 21500225 -181585307 - AluY SINE Alu -7 304 1 2157 106 7 0 chr5 21500337 21500639 -181584893 - AluSx SINE Alu -8 304 1 812 215 29 17 chr5 21500786 21500958 -181584574 - MER58B DNA MER1_type 0 341 168 1975 103 48 0 chr5 21501009 21501301 -181584231 - AluSp SINE Alu -7 306 1 190 350 70 0 chr5 21501308 21501408 -181584124 - MIR SINE MIR -61 147 41 226 239 0 60 chr5 21501583 21501650 -181583882 - L1ME3A LINE L1 -143 6027 5965 569 288 37 12 chr5 21502017 21502180 -181583352 + MIR SINE MIR 77 243 -19 873 132 0 0 chr5 21502240 21502361 -181583171 - FLAM_C SINE Alu -22 121 1 195 338 13 60 chr5 21502365 21502516 -181583016 + L3 LINE CR1 638 781 -796 966 127 0 0 chr5 21502567 21502709 -181582823 + FLAM_C SINE Alu 1 142 -1 2314 84 3 0 chr5 21502722 21503021 -181582511 + AluSp SINE Alu 5 304 -9 903 38 0 0 chr5 21503032 21503138 -181582394 + AluY SINE Alu 1 106 -205 1198 173 0 41 chr5 21503138 21503381 -181582151 + pTR5 LTR ERV1 743 975 -1463 1488 51 0 30 chr5 21503392 21503589 -181581943 + AluY SINE Alu 107 297 -14 1276 150 165 49 chr5 21503643 21503970 -181581562 + MLT1A1 LTR MaLR 1 365 0 2126 102 7 3 chr5 21503981 21504285 -181581247 - AluSg SINE Alu -4 306 2 344 331 39 17 chr5 21504328 21504506 -181581026 + MIR SINE MIR 6 187 -75 531 333 59 13 chr5 21504776 21505082 -181580450 + L3b LINE CR1 1109 1428 -155 824 142 0 45 chr5 21505152 21505286 -181580246 + FLAM_C SINE Alu 2 129 -14 2139 104 0 25 chr5 21505295 21505611 -181579921 + AluY SINE Alu 1 308 -3 2201 100 7 0 chr5 21506196 21506495 -181579037 + AluSx SINE Alu 1 301 -11 627 202 0 0 chr5 21506595 21506699 -181578833 + MER58 DNA MER1_type 2 105 -236 901 227 0 18 chr5 21506704 21506929 -181578603 + AluJb SINE Alu 87 307 -5 802 89 0 12 chr5 21507098 21507215 -181578317 - L1ME3A LINE L1 -525 5647 5552 189 0 0 0 chr5 21507348 21507369 -181578163 + (CAA)n Simple_repeat Simple_repeat 2 22 0 2025 98 4 0 chr5 21507855 21508171 -181577361 - AluSq SINE Alu 0 325 9 742 105 0 53 chr5 21508980 21509170 -181576362 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1837 136 0 0 chr5 21509200 21509472 -181576060 - AluSx SINE Alu -39 273 2 1486 185 33 0 chr5 21510580 21510856 -181574676 - AluJo SINE Alu -23 289 5 369 327 19 0 chr5 21510947 21511054 -181574478 - MER81 DNA DNA 0 114 6 397 102 0 220 chr5 21511151 21511198 -181574334 - L1MB2 LINE L1 -7 6164 6108 1896 177 24 0 chr5 21511198 21511537 -181573995 + MER7A DNA MER2_type 2 346 0 2056 118 14 0 chr5 21511538 21511835 -181573697 - AluSx SINE Alu 0 312 12 397 102 0 220 chr5 21511835 21511903 -181573629 - L1MB2 LINE L1 -62 6109 6073 209 308 13 26 chr5 21512359 21512437 -181573095 + L2 LINE L2 3237 3313 0 1788 170 3 6 chr5 21512480 21512792 -181572740 - AluJo SINE Alu -1 311 1 2037 116 24 0 chr5 21513325 21513619 -181571913 - AluSx SINE Alu -10 302 2 1667 158 29 4 chr5 21513642 21513920 -181571612 - AluJo SINE Alu -27 285 1 591 295 119 15 chr5 21514035 21514303 -181571229 - LTR16A LTR ERVL -53 397 102 260 263 0 0 chr5 21514558 21514615 -181570917 + GA-rich Low_complexity Low_complexity 2 58 0 215 332 68 58 chr5 21515120 21515325 -181570207 + L2 LINE L2 365 571 -2743 2390 66 0 7 chr5 21515465 21515770 -181569762 + AluY SINE Alu 1 303 -8 1027 260 89 9 chr5 21515875 21516190 -181569342 - LTR16C LTR ERVL 0 491 152 2300 101 0 0 chr5 21516215 21516522 -181569010 + AluSq SINE Alu 1 307 -6 1042 340 113 37 chr5 21517185 21518181 -181567351 + L2 LINE L2 1904 2975 -339 202 295 36 62 chr5 21518376 21518488 -181567044 + L2 LINE L2 3125 3233 -80 1616 153 9 87 chr5 21518651 21518984 -181566548 - AluJo SINE Alu -5 307 1 540 122 98 0 chr5 21519342 21519424 -181566108 - 5S rRNA rRNA -31 90 1 192 256 0 0 chr5 21519598 21519637 -181565895 + L3b LINE CR1 1443 1481 -102 243 358 20 57 chr5 21519838 21520084 -181565448 + L2 LINE L2 2823 3059 -213 312 229 16 0 chr5 21520157 21520218 -181565314 + MER91B DNA MER1_type 1 62 -128 215 354 80 18 chr5 21520746 21520859 -181564673 + L2 LINE L2 3127 3246 -26 2323 52 10 0 chr5 21520988 21521279 -181564253 - AluSc SINE Alu -7 302 9 760 276 86 0 chr5 21521280 21521490 -181564042 - MIR SINE MIR -34 228 1 1674 185 3 0 chr5 21521647 21521964 -181563568 - AluJb SINE Alu 0 318 1 2156 101 0 0 chr5 21522584 21522872 -181562660 - AluSx SINE Alu -14 298 11 1503 188 0 21 chr5 21522939 21523221 -181562311 - AluJo SINE Alu -32 280 5 2363 75 0 3 chr5 21523451 21523758 -181561774 + AluSc SINE Alu 1 306 -3 1929 184 30 45 chr5 21524120 21524397 -181561135 - MLT1B LTR MaLR 0 390 110 2265 87 0 10 chr5 21524397 21524709 -181560823 - AluSc SINE Alu 0 309 1 1929 184 30 45 chr5 21524709 21524729 -181560803 - MLT1B LTR MaLR -280 110 91 2272 137 87 20 chr5 21524729 21525130 -181560402 - MSTA LTR MaLR 0 428 1 1929 184 30 45 chr5 21525130 21525227 -181560305 - MLT1B LTR MaLR -299 91 1 222 233 12 12 chr5 21525366 21525452 -181560080 + (TAA)n Simple_repeat Simple_repeat 2 87 0 1745 120 3 45 chr5 21526148 21526440 -181559092 - AluSx SINE Alu -19 293 14 1491 178 45 42 chr5 21527314 21527691 -181557841 - LTR37A LTR ERV1 -3 423 46 2174 89 0 3 chr5 21528001 21528292 -181557240 - AluSc SINE Alu 0 309 20 274 241 0 128 chr5 21528764 21528897 -181556635 - L1ME1 LINE L1 -18 6148 6033 2386 76 0 0 chr5 21528927 21529230 -181556302 - AluY SINE Alu -8 303 1 254 214 40 40 chr5 21529239 21529365 -181556167 + Charlie7 DNA MER1_type 2451 2576 -36 336 258 32 11 chr5 21530449 21530542 -181554990 + Charlie7 DNA MER1_type 2509 2603 -9 1931 116 13 26 chr5 21530956 21531259 -181554273 - AluSx SINE Alu -13 299 1 1792 158 7 3 chr5 21531291 21531583 -181553949 + AluJb SINE Alu 1 293 -19 2119 112 0 0 chr5 21532400 21532695 -181552837 + AluSx SINE Alu 1 295 -17 1891 125 0 23 chr5 21533350 21533655 -181551877 - AluSx SINE Alu -14 298 1 697 125 0 2 chr5 21533697 21533927 -181551605 + AluJb SINE Alu 12 295 -17 234 0 0 0 chr5 21533951 21533977 -181551555 + (CA)n Simple_repeat Simple_repeat 2 27 0 665 144 24 72 chr5 21533978 21534103 -181551429 - FLAM_C SINE Alu -23 120 2 1923 104 4 7 chr5 21534111 21534390 -181551142 - AluSc SINE Alu -2 307 30 810 250 71 98 chr5 21534531 21535074 -181550458 + L1MC4 LINE L1 6634 7142 -819 2294 217 32 62 chr5 21535107 21535653 -181549879 + L1ME1 LINE L1 5520 6044 -122 2016 108 3 3 chr5 21535653 21535939 -181549593 - AluSc SINE Alu -13 296 11 2294 217 32 62 chr5 21535939 21536056 -181549476 + L1ME1 LINE L1 6044 6163 -3 608 286 79 26 chr5 21536091 21536395 -181549137 + L1MC4a LINE L1 7110 7429 -379 2217 96 13 0 chr5 21536497 21536799 -181548733 + AluSc SINE Alu 3 308 -1 1197 108 6 0 chr5 21536845 21537011 -181548521 + AluSx SINE Alu 1 167 -145 240 208 62 0 chr5 21537039 21537087 -181548445 + L1MC4 LINE L1 7843 7893 -149 262 115 39 0 chr5 21537090 21537142 -181548390 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 333 262 78 19 chr5 21537235 21537338 -181548194 + MER5B DNA MER1_type 37 145 -33 891 213 105 35 chr5 21537372 21537658 -181547874 - MLT1G LTR MaLR -57 533 228 285 280 90 50 chr5 21537658 21537716 -181547816 - MER5A DNA MER1_type -8 181 116 2076 118 0 0 chr5 21537716 21538013 -181547519 + AluSx SINE Alu 1 297 -15 285 280 90 50 chr5 21538013 21538054 -181547478 - MER5A DNA MER1_type -73 116 78 2135 121 0 3 chr5 21538394 21538708 -181546824 - AluSq SINE Alu 0 313 1 2201 88 3 0 chr5 21539429 21539724 -181545808 - AluSx SINE Alu -16 296 1 836 240 13 69 chr5 21539832 21540065 -181545467 + MER58A DNA MER1_type 5 224 0 691 289 95 29 chr5 21540313 21540555 -181544977 + MIR SINE MIR 5 262 0 762 200 0 65 chr5 21540721 21540849 -181544683 + MER5A DNA MER1_type 2 120 -69 738 246 60 15 chr5 21540849 21541048 -181544484 + MER63A DNA MER1_type 3 210 0 762 200 0 65 chr5 21541048 21541074 -181544458 + MER5A DNA MER1_type 120 146 -43 260 282 127 0 chr5 21541134 21541205 -181544327 + MIR SINE MIR 21 100 -162 1945 100 14 11 chr5 21541632 21541933 -181543599 - AluSc SINE Alu 0 302 1 580 302 62 23 chr5 21542143 21542278 -181543254 + MLT1L LTR MaLR 10 138 -477 877 217 24 38 chr5 21542278 21542404 -181543128 + MER3 DNA MER1_type 1 127 -82 216 0 0 0 chr5 21542404 21542428 -181543104 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 1999 131 0 0 chr5 21542429 21542726 -181542806 - AluSx SINE Alu -15 297 1 877 217 24 38 chr5 21542726 21542809 -181542723 + MER3 DNA MER1_type 126 209 0 580 302 62 23 chr5 21542809 21542931 -181542601 + MLT1L LTR MaLR 138 277 -338 864 314 20 0 chr5 21543099 21543354 -181542178 - MIR SINE MIR -1 261 2 286 292 33 25 chr5 21543388 21543508 -181542024 + MLT1L LTR MaLR 494 614 -1 250 184 41 0 chr5 21544408 21544457 -181541075 - L2 LINE L2 -1 3312 3262 1808 148 7 3 chr5 21544478 21544768 -181540764 - AluSx SINE Alu -21 291 1 208 342 108 8 chr5 21544897 21545017 -181540515 - MIR SINE MIR -95 167 36 195 304 160 50 chr5 21545637 21545818 -181539714 - MIR SINE MIR -54 208 8 814 149 8 0 chr5 21545850 21545971 -181539561 - FLAM_A SINE Alu -11 122 1 202 341 12 47 chr5 21545985 21546070 -181539462 - MIR3 SINE MIR -34 174 93 201 39 0 0 chr5 21546253 21546279 -181539253 + (TG)n Simple_repeat Simple_repeat 1 26 0 246 156 0 52 chr5 21546682 21546695 -181538837 + A-rich Low_complexity Low_complexity 2 14 -60 953 167 12 24 chr5 21546695 21546863 -181538669 + FRAM SINE Alu 1 166 0 246 156 0 52 chr5 21546863 21546926 -181538606 + A-rich Low_complexity Low_complexity 14 74 0 1436 217 26 0 chr5 21547494 21547804 -181537728 - AluJo SINE Alu 0 318 1 253 154 0 46 chr5 21547841 21547906 -181537626 + CT-rich Low_complexity Low_complexity 2 63 0 279 190 0 0 chr5 21549245 21549303 -181536229 + (TG)n Simple_repeat Simple_repeat 1 58 0 578 315 75 4 chr5 21549304 21549545 -181535987 + MIR SINE MIR 4 261 -1 2192 95 7 0 chr5 21551332 21551637 -181533895 - AluSq SINE Alu -6 307 1 1491 198 113 19 chr5 21551657 21552081 -181533451 - MLT1C LTR MaLR -3 464 1 2196 107 0 0 chr5 21553929 21554227 -181531305 + AluSx SINE Alu 1 298 -14 422 289 75 46 chr5 21554713 21554886 -181530646 - L3b LINE CR1 -29 1554 1377 24 0 0 0 chr5 21555434 21555458 -181530074 + AT_rich Low_complexity Low_complexity 1 24 0 2136 93 3 7 chr5 21555458 21555747 -181529785 - AluSx SINE Alu -24 288 1 1157 257 118 22 chr5 21556031 21556490 -181529042 + MLT1D LTR MaLR 1 503 -2 2180 110 3 0 chr5 21556723 21557032 -181528500 - AluSg SINE Alu 0 310 1 1825 143 7 0 chr5 21557234 21557527 -181528005 + AluSq SINE Alu 5 299 -14 549 222 0 0 chr5 21557590 21557698 -181527834 + MIR SINE MIR 44 151 -111 511 127 13 0 chr5 21557698 21557777 -181527755 + MADE1 DNA Mariner 1 80 0 380 257 95 0 chr5 21557778 21557883 -181527649 + MIR SINE MIR 148 262 0 863 128 0 0 chr5 21559459 21559584 -181525948 + FLAM_C SINE Alu 3 127 -6 180 0 0 0 chr5 21559597 21559617 -181525915 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1753 147 3 11 chr5 21559624 21559945 -181525587 + AluJb SINE Alu 1 319 0 1267 186 35 17 chr5 21559945 21560203 -181525329 + MLT1D LTR MaLR 252 505 0 544 244 118 0 chr5 21560228 21560363 -181525169 - MER58B DNA MER1_type 0 341 191 1507 103 0 5 chr5 21560462 21560676 -181524856 + AluSg/x SINE Alu 85 297 -15 2019 123 0 3 chr5 21560694 21560979 -181524553 + AluSx SINE Alu 1 284 -28 216 67 0 0 chr5 21560979 21561009 -181524523 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 355 327 64 26 chr5 21561106 21561262 -181524270 + MIR3 SINE MIR 4 165 -43 885 160 70 6 chr5 21561284 21561440 -181524092 - FRAM SINE Alu 0 166 1 2053 97 0 7 chr5 21561645 21561934 -181523598 + AluSc SINE Alu 1 287 -22 213 121 0 0 chr5 21561934 21561967 -181523565 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 2002 132 13 10 chr5 21562207 21562342 -181523190 + AluSx SINE Alu 1 134 -178 1907 108 54 0 chr5 21562342 21562619 -181522913 + AluSp SINE Alu 1 292 -21 2002 132 13 10 chr5 21562619 21562794 -181522738 + AluSx SINE Alu 134 312 0 716 197 27 7 chr5 21562930 21563077 -181522455 - MER3 DNA MER1_type -43 166 17 210 37 0 0 chr5 21563649 21563676 -181521856 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 204 286 107 45 chr5 21564070 21564132 -181521400 - L3 LINE CR1 -7 1570 1513 8198 57 4 6 chr5 21564132 21565141 -181520391 + LTR13 LTR ERVK 1 1007 0 204 286 107 45 chr5 21565141 21565190 -181520342 - L3 LINE CR1 -64 1513 1452 1911 119 14 0 chr5 21565962 21566248 -181519284 - AluSg SINE Alu -20 290 1 1037 81 0 7 chr5 21566248 21566384 -181519148 - AluSq/x SINE Alu -178 135 1 1799 166 0 10 chr5 21566459 21566772 -181518760 - AluJb SINE Alu -2 310 1 2392 78 3 0 chr5 21566978 21567285 -181518247 - AluY SINE Alu -3 308 1 2254 86 3 0 chr5 21568311 21568615 -181516917 + AluSq SINE Alu 1 305 -8 572 284 70 74 chr5 21568783 21569026 -181516506 + MIR SINE MIR 21 262 0 1852 148 7 7 chr5 21569448 21569753 -181515779 - AluJb SINE Alu -7 305 1 559 157 167 9 chr5 21569870 21569978 -181515554 + FLAM_C SINE Alu 1 125 -8 465 309 125 17 chr5 21570128 21570423 -181515109 - MLT1I LTR MaLR -19 390 64 416 203 14 0 chr5 21570642 21570716 -181514816 + MER58 DNA MER1_type 2344 2418 -2 676 160 80 16 chr5 21570737 21570850 -181514682 + FLAM_C SINE Alu 1 124 -178 225 0 0 0 chr5 21570850 21570875 -181514657 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 676 160 80 16 chr5 21570875 21570886 -181514646 + FLAM_C SINE Alu 124 133 -169 1286 201 37 40 chr5 21571335 21571634 -181513898 + AluJo SINE Alu 5 302 0 2103 85 34 3 chr5 21571634 21571927 -181513605 - AluSq SINE Alu -10 303 2 348 235 73 89 chr5 21572133 21572548 -181512984 + L1MC4a LINE L1 5943 6325 -1483 2022 123 0 29 chr5 21572548 21572864 -181512668 + AluSq SINE Alu 1 307 -6 348 235 73 89 chr5 21572864 21572903 -181512629 + L1MC4a LINE L1 6325 6363 -1445 545 221 24 80 chr5 21573203 21573416 -181512116 - MLT1B LTR MaLR -12 378 178 1967 124 10 3 chr5 21573451 21573758 -181511774 - AluSc SINE Alu 0 309 1 2323 73 0 19 chr5 21573772 21574089 -181511443 - AluY SINE Alu 0 311 1 335 274 21 21 chr5 21574256 21574351 -181511181 - MER5B DNA MER1_type 0 178 84 1656 146 47 23 chr5 21574827 21575128 -181510404 - AluJb SINE Alu -4 308 1 238 242 32 32 chr5 21575201 21575263 -181510269 + MER5B DNA MER1_type 117 178 0 1181 183 35 4 chr5 21575395 21575624 -181509908 + AluJo SINE Alu 1 236 -76 2325 134 34 18 chr5 21575667 21576048 -181509484 + MER61D LTR ERV1 114 500 -1 379 176 0 15 chr5 21576048 21576116 -181509416 + AluJo SINE Alu 234 300 -2 2416 53 0 28 chr5 21576116 21576436 -181509096 + AluY SINE Alu 1 311 0 1657 178 39 43 chr5 21576838 21577254 -181508278 - pTR5 LTR ERV1 -1279 1159 746 425 82 33 0 chr5 21577271 21577332 -181508200 + AluJo SINE Alu 239 301 -10 1989 122 3 0 chr5 21577844 21578130 -181507402 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr5 21578130 21578150 -181507382 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 197 338 0 29 chr5 21578606 21578674 -181506858 - L2 LINE L2 -24 3289 3224 363 291 97 84 chr5 21578879 21579428 -181506104 - L2 LINE L2 -1317 1997 1442 352 278 0 52 chr5 21579475 21579590 -181505942 + L2 LINE L2 3196 3304 -9 495 245 190 27 chr5 21579876 21580060 -181505472 + MER58C DNA MER1_type 2 215 0 2089 104 0 3 chr5 21580345 21580633 -181504899 + AluSq SINE Alu 1 287 -26 183 114 0 0 chr5 21580636 21580671 -181504861 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 1318 196 0 4 chr5 21580682 21580912 -181504620 + AluJo SINE Alu 1 229 -83 180 77 0 0 chr5 21580948 21580974 -181504558 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 812 248 73 100 chr5 21581325 21581868 -181503664 + L1MC4 LINE L1 6634 7142 -819 2333 217 32 60 chr5 21581901 21582446 -181503086 + L1ME1 LINE L1 5520 6044 -122 2125 109 3 3 chr5 21582446 21582731 -181502801 - AluSc SINE Alu -14 295 11 2333 217 32 60 chr5 21582731 21582848 -181502684 + L1ME1 LINE L1 6044 6163 -3 617 286 79 26 chr5 21582883 21583187 -181502345 + L1MC4a LINE L1 7110 7429 -379 2240 106 13 3 chr5 21583289 21583591 -181501941 + AluSc SINE Alu 3 307 -2 2271 74 7 3 chr5 21583789 21584072 -181501460 - AluY SINE Alu -24 287 4 406 168 117 97 chr5 21584075 21584271 -181501261 + L1MB8 LINE L1 5966 6165 -13 1752 81 0 5 chr5 21584488 21584710 -181500822 - AluSg/x SINE Alu -11 299 79 227 415 36 23 chr5 21584967 21585268 -181500264 - L3 LINE CR1 -1158 419 115 540 238 146 31 chr5 21585311 21585559 -181499973 + L1ME3A LINE L1 5671 5951 -211 257 258 16 0 chr5 21585679 21585741 -181499791 + L1ME3A LINE L1 6010 6072 -98 860 128 0 30 chr5 21587007 21587140 -181498392 + FLAM_C SINE Alu 11 139 -4 2383 81 3 0 chr5 21587145 21587441 -181498091 + AluY SINE Alu 1 297 -14 25 0 0 0 chr5 21587441 21587466 -181498066 + AT_rich Low_complexity Low_complexity 1 25 0 4452 123 70 20 chr5 21587481 21588223 -181497309 - MER4E LTR ERV1 0 779 1 225 0 0 0 chr5 21588504 21588529 -181497003 + (A)n Simple_repeat Simple_repeat 1 25 0 2525 63 0 0 chr5 21588820 21589119 -181496413 - AluSc SINE Alu -10 299 1 431 62 0 0 chr5 21589385 21589449 -181496083 + AluSp/q SINE Alu 243 306 -7 1450 132 23 39 chr5 21589449 21589756 -181495776 - MER4E-int LTR ERV1 -150 6608 6265 2605 66 0 0 chr5 21589756 21590061 -181495471 - AluY SINE Alu -6 305 1 1450 132 23 39 chr5 21590061 21590113 -181495419 - MER4E-int LTR ERV1 -493 6265 6214 453 121 0 0 chr5 21590117 21590183 -181495349 + LTR7 LTR ERV1 1 66 -384 412 204 16 0 chr5 21590328 21590418 -181495114 - L1P5 LINE L1 -473 5678 5585 648 225 46 0 chr5 21590520 21590671 -181494861 + MER33 DNA MER1_type 3 160 -164 537 163 85 47 chr5 21590676 21590805 -181494727 + AluJo SINE Alu 2 135 -177 1684 194 14 7 chr5 21590805 21591094 -181494438 + AluJo SINE Alu 1 291 -21 578 178 29 63 chr5 21591096 21591179 -181494353 + MER33 DNA MER1_type 196 271 -2353 1554 208 10 0 chr5 21591179 21591477 -181494055 - AluJo SINE Alu -11 301 1 578 178 29 63 chr5 21591477 21591567 -181493965 + MER33 DNA MER1_type 271 363 0 345 319 66 28 chr5 21591627 21591652 -181493880 + MIR SINE MIR 32 55 -207 1808 143 4 4 chr5 21591652 21591924 -181493608 - AluSx SINE Alu -40 272 1 345 319 66 28 chr5 21591924 21592111 -181493421 + MIR SINE MIR 55 252 -10 2440 170 0 57 chr5 21592839 21592890 -181492642 - L1MB3 LINE L1 0 6183 6131 2301 88 7 0 chr5 21592890 21593186 -181492346 - AluSc SINE Alu -3 306 9 2440 170 0 57 chr5 21593186 21593658 -181491874 - L1MB3 LINE L1 -52 6131 5690 1878 150 0 7 chr5 21593707 21593987 -181491545 + AluSx SINE Alu 1 278 -34 1874 130 3 27 chr5 21594228 21594520 -181491012 + AluJb SINE Alu 14 298 -14 2321 103 3 3 chr5 21595524 21595826 -181489706 + AluSg SINE Alu 1 302 -8 1835 141 6 28 chr5 21597752 21598071 -181487461 - AluJo SINE Alu 0 312 1 2338 92 3 0 chr5 21598567 21598860 -181486672 - AluSg SINE Alu -16 294 1 564 286 69 18 chr5 21599020 21599237 -181486295 + MIR SINE MIR 35 262 0 889 227 85 48 chr5 21599906 21600089 -181485443 - Charlie7 DNA MER1_type -1889 723 548 2258 107 0 0 chr5 21600089 21600379 -181485153 - AluSx SINE Alu -22 290 1 889 227 85 48 chr5 21600379 21600548 -181484984 - Charlie7 DNA MER1_type -2064 548 358 837 265 78 48 chr5 21601332 21601770 -181483762 - HAL1 LINE L1 -10 2497 2047 1578 274 172 35 chr5 21601931 21602104 -181483428 - HAL1 LINE L1 -698 1809 1661 1812 179 10 7 chr5 21602104 21602411 -181483121 + AluJb SINE Alu 1 308 -4 1578 274 172 35 chr5 21602411 21603050 -181482482 - HAL1 LINE L1 -846 1661 1111 1878 128 82 0 chr5 21603050 21603212 -181482320 - AluSq SINE Alu -5 308 161 477 0 0 0 chr5 21603212 21603265 -181482267 + (TG)n Simple_repeat Simple_repeat 2 54 0 1878 128 82 0 chr5 21603265 21603383 -181482149 - AluSq SINE Alu -152 161 5 1578 274 172 35 chr5 21603383 21603722 -181481810 - HAL1 LINE L1 -1396 1111 499 360 266 18 26 chr5 21604791 21604904 -181480628 - MLT1I LTR MaLR 0 409 298 542 296 31 0 chr5 21604943 21605105 -181480427 - MLT1I LTR MaLR -197 212 46 197 250 17 17 chr5 21605195 21605255 -181480277 - MIR SINE MIR -87 175 116 537 128 0 0 chr5 21605428 21605506 -181480026 - AluSg/x SINE Alu -20 292 215 2602 44 0 0 chr5 21605714 21606008 -181479524 - AluY SINE Alu -17 294 1 22 56 0 0 chr5 21606010 21606046 -181479486 + AT_rich Low_complexity Low_complexity 1 36 0 2364 43 22 0 chr5 21606340 21606641 -181478891 + AluY SINE Alu 1 307 0 324 70 0 0 chr5 21607536 21607579 -181477953 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1654 167 48 4 chr5 21607581 21607733 -181477799 - AluJb SINE Alu -30 282 111 235 0 57 0 chr5 21607733 21607768 -181477764 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 1654 167 48 4 chr5 21607768 21607885 -181477647 - AluJb SINE Alu -201 111 1 1788 147 37 4 chr5 21608465 21608738 -181476794 + AluSx SINE Alu 1 282 -30 601 191 55 0 chr5 21609585 21609695 -181475837 - MLT1B LTR MaLR -7 383 268 1921 83 124 8 chr5 21609696 21609961 -181475571 - AluSg1 SINE Alu -13 296 1 1892 112 40 14 chr5 21610464 21610771 -181474761 - AluSx SINE Alu 0 314 1 274 319 178 24 chr5 21611401 21611784 -181473748 + L2 LINE L2 2824 3265 -7 2130 108 0 7 chr5 21613757 21614077 -181471455 + AluSx SINE Alu 1 318 0 2479 72 0 7 chr5 21615169 21615473 -181470059 - AluY SINE Alu -9 302 1 1136 72 144 0 chr5 21615880 21616047 -181469485 - MER30 DNA MER1_type -37 193 3 2356 90 0 3 chr5 21616175 21616476 -181469056 - AluSq SINE Alu -13 300 1 1972 75 0 43 chr5 21616977 21617282 -181468250 + AluY SINE Alu 1 292 -19 2190 79 54 0 chr5 21617451 21617731 -181467801 + AluSc SINE Alu 1 295 -14 2106 130 0 17 chr5 21618971 21619272 -181466260 + AluSx SINE Alu 1 296 -16 1535 155 14 25 chr5 21619823 21620100 -181465432 + L1MC1 LINE L1 6050 6323 -10 427 207 65 83 chr5 21620910 21621025 -181464507 + MIR SINE MIR 76 189 -73 2095 150 0 0 chr5 21621025 21621332 -181464200 + AluSx SINE Alu 1 307 -5 427 207 65 83 chr5 21621332 21621385 -181464147 + MIR SINE MIR 189 241 -21 21 57 0 0 chr5 21621430 21621465 -181464067 + AT_rich Low_complexity Low_complexity 1 35 0 534 209 37 15 chr5 21621555 21621685 -181463847 - MLT1A1 LTR MaLR 0 365 220 592 162 29 9 chr5 21621709 21621814 -181463718 - U6 snRNA snRNA 0 107 1 2143 106 3 3 chr5 21621855 21622172 -181463360 - AluSx SINE Alu 0 317 1 474 171 0 0 chr5 21622172 21622248 -181463284 - FRAM SINE Alu -35 141 66 297 100 0 0 chr5 21622255 21622305 -181463227 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 723 197 0 33 chr5 21622314 21622466 -181463066 - MLT1A1 LTR MaLR -218 147 1 2424 87 0 0 chr5 21623028 21623326 -181462206 + AluY SINE Alu 1 298 -13 1990 129 38 0 chr5 21624510 21624797 -181460735 + AluSx SINE Alu 1 298 -14 2608 56 3 0 chr5 21625421 21625727 -181459805 - AluY SINE Alu -4 307 1 290 204 11 34 chr5 21625770 21625858 -181459674 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 304 181 60 43 chr5 21625858 21625974 -181459558 + L1MC4 LINE L1 7925 8042 0 1308 218 85 13 chr5 21627407 21627723 -181457809 - MER58B DNA MER1_type -2 339 1 569 220 90 40 chr5 21627731 21627908 -181457624 - MER5A DNA MER1_type 0 189 4 1955 136 35 0 chr5 21627959 21628245 -181457287 + AluSx SINE Alu 1 296 -16 318 150 0 163 chr5 21629395 21629438 -181456094 - THE1B LTR MaLR 0 375 349 2386 88 0 0 chr5 21629438 21629733 -181455799 + AluSc SINE Alu 1 295 -14 318 150 0 163 chr5 21629733 21629769 -181455763 - THE1B LTR MaLR -26 349 309 2071 124 17 3 chr5 21629786 21630084 -181455448 - AluSq SINE Alu -11 302 1 1060 112 82 12 chr5 21630084 21630254 -181455278 - THE1B LTR MaLR -181 183 2 1814 117 18 15 chr5 21630254 21630528 -181455004 - AluSx SINE Alu -37 275 1 32 43 0 0 chr5 21630970 21631016 -181454516 + AT_rich Low_complexity Low_complexity 1 46 0 4051 158 100 26 chr5 21631766 21632690 -181452842 + pTR5 LTR ERV1 742 2025 -413 355 183 56 75 chr5 21632690 21632797 -181452735 + LTR30 LTR ERV1 544 721 -73 1174 127 1 7 chr5 21632797 21632987 -181452545 + pTR5 LTR ERV1 75 396 -2042 2162 128 0 0 chr5 21633082 21633372 -181452160 + AluSx SINE Alu 1 290 -22 274 291 0 13 chr5 21633666 21633745 -181451787 - MIR3 SINE MIR -28 180 103 2396 88 3 0 chr5 21633965 21634261 -181451271 + AluSq SINE Alu 1 297 -16 1283 229 79 39 chr5 21634308 21634740 -181450792 + MLT2B1 LTR ERVL 3 414 0 270 300 100 0 chr5 21634795 21634885 -181450647 - L2 LINE L2 0 3313 3215 1684 153 75 14 chr5 21634886 21635180 -181450352 + AluJb SINE Alu 1 312 0 516 200 0 0 chr5 21635181 21635291 -181450241 + GA-rich Low_complexity Low_complexity 1 110 0 1980 139 0 20 chr5 21635304 21635636 -181449896 - AluSg SINE Alu 0 310 1 892 152 21 0 chr5 21635646 21635791 -181449741 - L1MB5 LINE L1 -8 6166 6019 1339 202 11 0 chr5 21635795 21636057 -181449475 - L1MB5 LINE L1 -250 5924 5660 205 215 62 15 chr5 21636165 21636201 -181449331 + MIR SINE MIR 195 228 -34 4607 63 10 0 chr5 21636201 21636784 -181448748 + L1PA14 LINE L1 5573 6161 0 205 215 62 15 chr5 21636784 21636812 -181448720 + MIR SINE MIR 228 262 0 215 73 49 0 chr5 21637024 21637065 -181448467 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 426 227 62 0 chr5 21639319 21639416 -181446116 + Tigger7 DNA MER2_type 1 103 -630 713 197 42 0 chr5 21639532 21639674 -181445858 + Tigger7 DNA MER2_type 118 265 -285 642 158 0 0 chr5 21639675 21639770 -181445762 + Tigger7 DNA MER2_type 2395 2489 -2 2173 122 10 0 chr5 21639930 21640226 -181445306 + AluSx SINE Alu 1 299 -13 250 278 0 0 chr5 21640811 21640865 -181444667 + polypurine Low_complexity Low_complexity 2 55 0 424 220 93 8 chr5 21640927 21641045 -181444487 - MIR SINE MIR -65 143 16 283 319 164 13 chr5 21641108 21641340 -181444192 + L1MC4a LINE L1 5650 5916 -1892 283 0 0 0 chr5 21642296 21642331 -181443201 + L1MA8 LINE L1 6237 6271 -20 184 165 0 38 chr5 21642717 21642796 -181442736 + (TTATA)n Simple_repeat Simple_repeat 2 77 0 340 273 98 74 chr5 21642938 21643037 -181442495 + Charlie8 DNA MER1_type 21 116 -225 2053 125 3 3 chr5 21643037 21643326 -181442206 + AluSx SINE Alu 8 296 -16 340 273 98 74 chr5 21643326 21643482 -181442050 + Charlie8 DNA MER1_type 116 282 -59 21 36 0 0 chr5 21644262 21644290 -181441242 + AT_rich Low_complexity Low_complexity 1 28 0 2145 105 10 20 chr5 21644305 21644601 -181440931 - AluSq SINE Alu -20 293 1 2207 112 0 7 chr5 21645779 21646097 -181439435 + AluSx SINE Alu 2 312 0 21 0 0 0 chr5 21646161 21646182 -181439350 + AT_rich Low_complexity Low_complexity 1 21 0 496 260 106 19 chr5 21646182 21646390 -181439142 - MIR SINE MIR -31 231 6 227 155 69 35 chr5 21646495 21646553 -181438979 - MLT2B1 LTR ERVL 0 515 456 352 189 11 11 chr5 21646595 21646685 -181438847 + (TA)n Simple_repeat Simple_repeat 1 90 0 319 215 0 151 chr5 21646723 21646816 -181438716 + Tigger3(Golem) DNA MER2_type 2 80 -2949 338 256 44 0 chr5 21646931 21647021 -181438511 + Tigger3(Golem) DNA MER2_type 2944 3037 0 1943 178 66 6 chr5 21647051 21647452 -181438080 - MLT2B1 LTR ERVL -44 471 1 367 268 0 0 chr5 21647811 21647882 -181437650 - LTR53 LTR ERVL 0 519 449 1982 120 4 4 chr5 21648472 21648748 -181436784 + AluSg SINE Alu 1 276 -34 842 104 48 0 chr5 21648748 21648873 -181436659 + AluY SINE Alu 174 304 -7 1840 154 31 0 chr5 21649192 21649478 -181436054 - AluJb SINE Alu -17 295 1 2000 127 0 23 chr5 21650127 21650426 -181435106 - AluSg SINE Alu -18 292 1 255 241 284 7 chr5 21650556 21650697 -181434835 + MER5A DNA MER1_type 9 188 -1 2173 121 16 0 chr5 21650908 21651213 -181434319 - AluSx SINE Alu -2 310 1 2035 140 13 0 chr5 21651689 21651997 -181433535 + AluSx SINE Alu 1 312 0 26 30 0 0 chr5 21652614 21652647 -181432885 + AT_rich Low_complexity Low_complexity 1 33 0 1993 169 0 6 chr5 21652867 21653181 -181432351 - AluJb SINE Alu 0 312 1 202 280 140 0 chr5 21653275 21653382 -181432150 - L2 LINE L2 -11 3302 3181 501 271 133 0 chr5 21653696 21653877 -181431655 - MIR SINE MIR -18 244 40 251 324 83 52 chr5 21654227 21654543 -181430989 + L2 LINE L2 74 402 -2912 2306 94 3 0 chr5 21654543 21654830 -181430702 - AluSx SINE Alu -12 300 13 248 354 89 15 chr5 21654874 21655269 -181430263 + L2 LINE L2 2554 2977 -337 2403 119 14 27 chr5 21655319 21655688 -181429844 + THE1B LTR MaLR 1 364 0 695 273 123 50 chr5 21655778 21656240 -181429292 - L2 LINE L2 0 3313 2818 537 229 121 0 chr5 21656278 21656418 -181429114 + MER45A DNA AcHobo 2 158 -20 838 329 45 26 chr5 21656464 21656662 -181428870 - L2 LINE L2 -526 2788 2595 2004 134 0 3 chr5 21656662 21656784 -181428748 + AluSx SINE Alu 12 133 -179 2174 103 24 0 chr5 21656784 21657075 -181428457 + AluSg SINE Alu 1 298 -12 2004 134 0 3 chr5 21657075 21657235 -181428297 + AluSx SINE Alu 133 293 -19 838 329 45 26 chr5 21657235 21657565 -181427967 - L2 LINE L2 -719 2595 2250 4411 173 18 35 chr5 21657571 21658086 -181427446 - L1MA7 LINE L1 -4 6287 5792 1604 169 68 14 chr5 21658086 21658381 -181427151 - AluJb SINE Alu -1 311 1 4411 173 18 35 chr5 21658381 21658760 -181426772 - L1MA7 LINE L1 -499 5792 5408 819 188 0 0 chr5 21658773 21658906 -181426626 - FLAM_C SINE Alu -10 133 1 293 213 32 85 chr5 21658909 21659003 -181426529 + L2 LINE L2 3184 3272 0 2502 84 3 0 chr5 21659300 21659609 -181425923 - AluSx SINE Alu -2 310 1 2150 112 17 0 chr5 21660290 21660584 -181424948 + AluSx SINE Alu 1 299 -13 747 62 0 0 chr5 21660976 21661073 -181424459 + (GGAA)n Simple_repeat Simple_repeat 1 97 0 180 0 0 0 chr5 21661324 21661344 -181424188 + (TG)n Simple_repeat Simple_repeat 2 21 0 197 0 0 67 chr5 21661435 21661465 -181424067 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 369 109 0 0 chr5 21662184 21662239 -181423293 + (TG)n Simple_repeat Simple_repeat 2 56 0 1852 149 10 3 chr5 21662242 21662530 -181423002 - AluSx SINE Alu -20 292 3 1570 177 9 40 chr5 21663062 21663384 -181422148 + AluSx SINE Alu 1 312 0 1664 150 52 36 chr5 21663667 21663974 -181421558 + AluJo SINE Alu 1 312 0 21 36 0 0 chr5 21665542 21665570 -181419962 + AT_rich Low_complexity Low_complexity 1 28 0 226 272 102 75 chr5 21666489 21666636 -181418896 - MIR3 SINE MIR -37 171 21 799 142 0 22 chr5 21666988 21667122 -181418410 - FLAM_C SINE Alu -2 131 1 195 69 0 0 chr5 21667331 21667360 -181418172 + (T)n Simple_repeat Simple_repeat 1 29 0 488 36 48 0 chr5 21668061 21668144 -181417388 + (GA)n Simple_repeat Simple_repeat 1 87 0 23 68 0 0 chr5 21668456 21668500 -181417032 + GC_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr5 21668511 21668548 -181416984 + GC_rich Low_complexity Low_complexity 1 37 0 874 177 6 0 chr5 21669050 21669208 -181416324 - AluJb SINE Alu -21 291 133 37 0 0 0 chr5 21670028 21670065 -181415467 + AT_rich Low_complexity Low_complexity 1 37 0 236 302 47 39 chr5 21671529 21671658 -181413874 - MIR SINE MIR -9 253 124 2234 118 3 10 chr5 21671990 21672303 -181413229 - AluSx SINE Alu -1 311 1 1802 132 75 0 chr5 21672666 21672971 -181412561 + AluSx SINE Alu 1 312 0 196 195 0 0 chr5 21673189 21673230 -181412302 + MIR SINE MIR 89 129 -133 25 0 0 0 chr5 21673230 21673255 -181412277 + AT_rich Low_complexity Low_complexity 1 25 0 2312 104 3 3 chr5 21673788 21674096 -181411436 + AluSp SINE Alu 1 308 -5 22 35 0 0 chr5 21675792 21675821 -181409711 + AT_rich Low_complexity Low_complexity 1 29 0 270 56 0 0 chr5 21676240 21676276 -181409256 + (A)n Simple_repeat Simple_repeat 1 36 0 2147 118 0 20 chr5 21676282 21676586 -181408946 + AluSg SINE Alu 5 302 -8 2193 96 10 35 chr5 21677255 21677569 -181407963 - AluSx SINE Alu -2 310 5 241 171 24 49 chr5 21680566 21680648 -181404884 + L1MA7 LINE L1 6146 6225 -66 886 122 0 15 chr5 21680667 21680798 -181404734 + FLAM_C SINE Alu 5 133 0 2542 63 0 3 chr5 21680951 21681252 -181404280 + AluY SINE Alu 1 300 -11 602 276 12 0 chr5 21681543 21681713 -181403819 - MIR SINE MIR -55 207 36 23 33 0 0 chr5 21683049 21683079 -181402453 + AT_rich Low_complexity Low_complexity 1 30 0 730 131 0 62 chr5 21683079 21683209 -181402323 - FLAM_C SINE Alu -11 122 1 2399 128 3 35 chr5 21684700 21685076 -181400456 + THE1B LTR MaLR 1 364 0 315 354 12 49 chr5 21685559 21685723 -181399809 - MER5A DNA MER1_type -29 160 3 253 286 31 31 chr5 21687434 21687532 -181398000 + MIR SINE MIR 47 144 -64 21 0 0 0 chr5 21689006 21689027 -181396505 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 21689997 21690019 -181395513 + AT_rich Low_complexity Low_complexity 1 22 0 1997 157 0 6 chr5 21690595 21690908 -181394624 + AluJb SINE Alu 1 311 -1 841 199 12 18 chr5 21691091 21691257 -181394275 + MER58B DNA MER1_type 177 341 0 258 344 26 7 chr5 21691604 21691755 -181393777 + MIR SINE MIR 45 198 -64 273 323 76 55 chr5 21692094 21692385 -181393147 + L2 LINE L2 2172 2468 -846 234 279 96 0 chr5 21692528 21692632 -181392900 + MLT1J LTR MaLR 225 338 -173 529 147 0 0 chr5 21692673 21692775 -181392757 - L1MA4 LINE L1 -5 6295 6194 584 128 0 0 chr5 21692782 21692884 -181392648 - L1MA4 LINE L1 -5 6295 6194 568 136 0 0 chr5 21692891 21692994 -181392538 - L1MA4 LINE L1 -5 6295 6193 383 301 24 0 chr5 21693023 21693146 -181392386 + MLT1J LTR MaLR 379 504 -7 2581 64 0 0 chr5 21693205 21693516 -181392016 + AluY SINE Alu 1 311 0 2160 117 3 19 chr5 21693862 21694170 -181391362 + AluSx SINE Alu 1 303 -9 1774 154 7 0 chr5 21696891 21697196 -181388336 - AluJb SINE Alu 0 315 9 2112 109 0 26 chr5 21697606 21697909 -181387623 - AluSg SINE Alu -15 295 1 192 277 54 45 chr5 21698220 21698332 -181387200 + MIR SINE MIR 21 133 -129 22 0 0 0 chr5 21698552 21698574 -181386958 + AT_rich Low_complexity Low_complexity 1 22 0 1713 137 7 26 chr5 21698783 21699054 -181386478 - AluSg SINE Alu -12 298 33 235 150 83 33 chr5 21699161 21699221 -181386311 + MER20 DNA MER1_type 155 217 -2 2371 79 23 0 chr5 21699855 21700159 -181385373 - AluY SINE Alu 0 311 1 3024 123 40 80 chr5 21700190 21700767 -181384765 + MER41A LTR ERV1 1 554 0 2042 119 10 16 chr5 21702007 21702333 -181383199 - AluSx SINE Alu 0 312 1 814 163 0 15 chr5 21702875 21703010 -181382522 - FLAM_C SINE Alu 0 133 1 2350 87 3 3 chr5 21703018 21703316 -181382216 - AluSx SINE Alu -14 298 1 1970 120 64 25 chr5 21703395 21703754 -181381778 + THE1C LTR MaLR 1 373 -2 2137 110 13 32 chr5 21704280 21704609 -181380923 - AluSx SINE Alu 0 331 9 505 143 0 0 chr5 21704702 21704779 -181380753 - L1MA8 LINE L1 -139 6152 6076 486 168 8 48 chr5 21704779 21704899 -181380633 + L1MA8 LINE L1 6169 6288 -3 21 0 0 0 chr5 21704902 21704923 -181380609 + AT_rich Low_complexity Low_complexity 1 21 0 508 114 0 0 chr5 21705133 21705203 -181380329 - AluS SINE Alu -238 75 6 1095 79 0 0 chr5 21705213 21705353 -181380179 - AluSg/x SINE Alu 0 310 171 1974 130 0 7 chr5 21705507 21705791 -181379741 - AluSx SINE Alu -30 282 1 1563 104 146 15 chr5 21705845 21706105 -181379427 - AluSq SINE Alu -9 294 1 2189 85 24 3 chr5 21706110 21706404 -181379128 - AluSx SINE Alu -12 300 1 847 267 14 0 chr5 21706500 21706721 -181378811 - MER58A DNA MER1_type 0 224 1 2654 84 3 11 chr5 21707497 21707864 -181377668 + LTR7 LTR ERV1 85 448 -2 9247 144 73 23 chr5 21707865 21708331 -181377201 - MER4B-int LTR ERV1 -543 6215 5774 2260 112 3 0 chr5 21708331 21708634 -181376898 - AluSx SINE Alu -8 304 1 9247 144 73 23 chr5 21708634 21709744 -181375788 - MER4B-int LTR ERV1 -984 5774 4549 1893 126 42 3 chr5 21709744 21710029 -181375503 - AluSg SINE Alu -14 296 1 9247 144 73 23 chr5 21710029 21710122 -181375410 - MER4B-int LTR ERV1 -2209 4549 4462 5982 119 30 45 chr5 21710146 21711710 -181373822 - pTR5 LTR ERV1 0 2438 743 2537 140 70 0 chr5 21711710 21712111 -181373421 - MER4B-int LTR ERV1 -2683 4075 3647 2218 101 20 0 chr5 21712111 21712409 -181373123 + AluSp SINE Alu 1 304 -9 429 279 108 29 chr5 21712528 21712768 -181372764 + MIR SINE MIR 1 259 -3 1435 242 37 67 chr5 21713138 21713252 -181372280 + L2 LINE L2 2166 2282 -1032 1861 162 3 10 chr5 21713252 21713555 -181371977 - AluJo SINE Alu -11 301 1 1435 242 37 67 chr5 21713555 21714011 -181371521 + L2 LINE L2 2282 2719 -595 189 74 0 0 chr5 21714017 21714044 -181371488 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2129 115 0 0 chr5 21714047 21714325 -181371207 - AluSx SINE Alu -29 283 6 1506 114 4 26 chr5 21714774 21715001 -181370531 - AluJb SINE Alu -4 308 87 491 220 61 45 chr5 21715020 21715152 -181370380 + L2 LINE L2 3180 3313 0 1864 123 0 4 chr5 21715262 21715514 -181370018 - AluSx SINE Alu -61 251 1 1018 111 7 0 chr5 21715514 21715649 -181369883 - AluSq/x SINE Alu -177 136 1 2102 103 10 10 chr5 21718179 21718469 -181367063 + AluSx SINE Alu 1 290 -22 1160 132 12 0 chr5 21718485 21718652 -181366880 + AluSg/x SINE Alu 125 293 -19 2272 90 27 7 chr5 21718652 21718952 -181366580 + AluSg SINE Alu 1 306 -4 622 239 149 0 chr5 21722519 21722707 -181362825 - MIR SINE MIR -38 224 9 180 0 0 0 chr5 21724489 21724509 -181361023 + (A)n Simple_repeat Simple_repeat 1 20 0 206 250 0 0 chr5 21724830 21724874 -181360658 + (TATATG)n Simple_repeat Simple_repeat 1 44 0 26 0 0 0 chr5 21727261 21727287 -181358245 + GC_rich Low_complexity Low_complexity 1 26 0 42 71 0 0 chr5 21727973 21728057 -181357475 + GC_rich Low_complexity Low_complexity 1 84 0 321 155 0 0 chr5 21728210 21728268 -181357264 + (CCG)n Simple_repeat Simple_repeat 2 59 0 460 310 0 22 chr5 21728289 21728473 -181357059 + C-rich Low_complexity Low_complexity 1 180 0 252 260 0 88 chr5 21728515 21728707 -181356825 + C-rich Low_complexity Low_complexity 3 177 0 459 113 0 0 chr5 21728752 21728832 -181356700 + (TC)n Simple_repeat Simple_repeat 1 80 0 995 132 20 93 chr5 21730224 21730428 -181355104 - MER20 DNA MER1_type -30 189 1 21 0 0 0 chr5 21730908 21730929 -181354603 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 21732098 21732122 -181353410 + AT_rich Low_complexity Low_complexity 1 24 0 279 146 73 18 chr5 21732185 21732240 -181353292 + MER20 DNA MER1_type 160 217 -2 815 272 25 0 chr5 21732871 21733110 -181352422 - AluSg/x SINE Alu 0 312 68 406 265 66 29 chr5 21733630 21733766 -181351766 - L1ME LINE L1 -5924 146 6 293 322 131 0 chr5 21733779 21733879 -181351653 - MIR SINE MIR -2 260 174 221 81 0 27 chr5 21733879 21733916 -181351616 + (CAT)n Simple_repeat Simple_repeat 2 37 0 293 322 131 0 chr5 21733916 21733998 -181351534 - MIR SINE MIR -88 174 54 2264 90 19 26 chr5 21734022 21734334 -181351198 - AluSg SINE Alu 0 310 1 2191 82 3 0 chr5 21734334 21734616 -181350916 - AluY SINE Alu -28 283 1 578 291 11 34 chr5 21734656 21734835 -181350697 - MER5B DNA MER1_type 0 178 4 1171 167 0 19 chr5 21735976 21736192 -181349340 - AluSx SINE Alu -98 214 3 350 319 9 0 chr5 21736481 21736597 -181348935 + Charlie2 DNA MER1_type 1908 2024 -838 875 206 6 0 chr5 21738175 21738335 -181347197 - AluSx SINE Alu -29 281 121 27557 133 14 15 chr5 21738366 21743538 -181341994 - L1PA8A LINE L1 0 6446 1223 234 62 0 0 chr5 21743538 21743570 -181341962 + (TTG)n Simple_repeat Simple_repeat 2 33 0 27557 133 14 15 chr5 21743570 21744788 -181340744 - L1PA8A LINE L1 -5223 1223 5 718 158 108 0 chr5 21744789 21744909 -181340623 - AluSx SINE Alu -178 134 2 1257 259 87 65 chr5 21744909 21745892 -181339640 - L1M4b LINE L1 -4611 2527 1350 224 188 87 58 chr5 21746236 21746305 -181339227 + MIR SINE MIR 80 150 -112 2091 139 3 0 chr5 21746403 21746705 -181338827 - AluSq SINE Alu -10 303 1 2393 87 3 3 chr5 21747320 21747631 -181337901 + AluY SINE Alu 1 311 0 192 77 0 0 chr5 21747936 21747962 -181337570 + (TTA)n Simple_repeat Simple_repeat 1 26 0 485 324 104 5 chr5 21747966 21748188 -181337344 - MIR SINE MIR -8 254 11 210 245 128 75 chr5 21748233 21748327 -181337205 - MIR SINE MIR -92 116 18 329 247 0 13 chr5 21748419 21748496 -181337036 - MLT1F1 LTR MaLR -450 117 42 1969 164 48 8 chr5 21748496 21748727 -181336805 - L1MC3 LINE L1 -695 7090 6837 3110 107 9 24 chr5 21748727 21749194 -181336338 - L1PA15 LINE L1 0 6165 5706 1969 164 48 8 chr5 21749194 21749334 -181336198 - L1MC3 LINE L1 -948 6837 6704 550 270 53 11 chr5 21749364 21749553 -181335979 + L1ME3A LINE L1 5964 6160 -10 186 103 0 0 chr5 21749568 21749597 -181335935 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 328 280 68 34 chr5 21749634 21749752 -181335780 + MIR SINE MIR 45 166 -96 209 219 0 16 chr5 21749824 21749853 -181335679 + (TA)n Simple_repeat Simple_repeat 2 30 -34 2759 220 31 32 chr5 21749853 21750507 -181335025 - MER82 DNA MER2_type 0 653 1 209 219 0 16 chr5 21750507 21750541 -181334991 + (TA)n Simple_repeat Simple_repeat 30 64 0 183 245 102 0 chr5 21750738 21750787 -181334745 - L2 LINE L2 -65 3248 3195 834 309 39 21 chr5 21752102 21752490 -181333042 + LTR16B LTR ERVL 66 460 -4 330 348 18 9 chr5 21753379 21753491 -181332041 + MIR SINE MIR 18 130 -78 264 161 0 32 chr5 21753910 21753972 -181331560 + L1MC4 LINE L1 6646 6705 -1337 207 229 0 0 chr5 21753972 21754033 -181331499 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 25 51 0 0 chr5 21754078 21754117 -181331415 + AT_rich Low_complexity Low_complexity 1 39 0 210 143 0 0 chr5 21754424 21754459 -181331073 + (A)n Simple_repeat Simple_repeat 1 35 0 1592 126 3 86 chr5 21755000 21755143 -181330389 + LTR8 LTR ERV1 1 154 -537 2474 70 0 0 chr5 21755143 21755443 -181330089 - AluY SINE Alu -11 300 1 8021 62 4 2 chr5 21755443 21757184 -181328348 - L1PA6 LINE L1 -6 6148 4405 1592 126 3 86 chr5 21757184 21757341 -181328191 + LTR8 LTR ERV1 152 277 -414 874 115 43 14 chr5 21757360 21757499 -181328033 + LTR8 LTR ERV1 549 691 0 180 154 0 0 chr5 21757604 21757630 -181327902 + MER5A DNA MER1_type 1 26 -163 4025 138 19 12 chr5 21757631 21758083 -181327449 + L1PA16 LINE L1 5524 5984 -182 2062 134 0 0 chr5 21758083 21758424 -181327108 + AluSx SINE Alu 1 341 0 4025 138 19 12 chr5 21758424 21758608 -181326924 + L1PA16 LINE L1 5984 6165 -1 761 238 24 0 chr5 21758614 21758778 -181326754 + MER5A DNA MER1_type 11 178 -11 204 294 73 0 chr5 21758880 21758948 -181326584 - MIR SINE MIR -64 144 72 327 49 0 0 chr5 21759319 21759360 -181326172 + (TG)n Simple_repeat Simple_repeat 1 41 0 1968 136 37 0 chr5 21760866 21761161 -181324371 - AluSx SINE Alu -6 306 1 1696 191 3 7 chr5 21761166 21761470 -181324062 - AluJb SINE Alu -9 303 1 191 227 0 0 chr5 21762691 21762735 -181322797 + L2 LINE L2 3270 3313 0 1461 158 31 15 chr5 21764322 21764582 -181320950 + L1MC1 LINE L1 6070 6333 0 24 77 0 0 chr5 21765706 21765758 -181319774 + AT_rich Low_complexity Low_complexity 1 52 0 527 248 55 14 chr5 21765844 21765989 -181319543 + L1ME1 LINE L1 6011 6161 -5 2795 96 3 0 chr5 21766259 21766613 -181318919 - THE1A LTR MaLR 0 355 1 2319 74 0 0 chr5 21766743 21767064 -181318468 + AluY SINE Alu 1 321 0 2046 231 13 18 chr5 21767070 21767520 -181318012 - LTR40b LTR ERVL -14 448 1 206 333 131 0 chr5 21768146 21768245 -181317287 + L2 LINE L2 3161 3272 0 4222 125 49 29 chr5 21768279 21768998 -181316534 + L1MA8 LINE L1 5542 6274 -17 297 0 0 0 chr5 21770506 21770539 -181314993 + (CA)n Simple_repeat Simple_repeat 1 33 0 541 338 96 39 chr5 21770541 21771177 -181314355 + L2 LINE L2 339 1010 -2304 327 370 39 8 chr5 21771420 21771547 -181313985 + L2 LINE L2 3134 3264 -8 237 209 0 0 chr5 21771547 21771590 -181313942 + (CA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr5 21772906 21772926 -181312606 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2559 164 58 14 chr5 21773894 21774448 -181311084 - LTR1 LTR ERV1 0 785 208 241 267 11 11 chr5 21774844 21774934 -181310598 + L1MEc LINE L1 787 876 -5520 439 249 89 69 chr5 21775202 21775563 -181309969 - MLT1E3 LTR MaLR 0 624 257 1658 174 0 13 chr5 21776015 21776326 -181309206 - AluSx SINE Alu -3 309 3 365 310 9 0 chr5 21776615 21776731 -181308801 + Charlie2 DNA MER1_type 1908 2024 -838 443 249 89 69 chr5 21778635 21778996 -181306536 - MLT1E3 LTR MaLR 0 624 257 229 278 41 0 chr5 21779122 21779219 -181306313 - MLT1E3 LTR MaLR -547 107 7 1461 207 3 13 chr5 21779467 21779767 -181305765 - AluSx SINE Alu -13 299 3 804 156 8 0 chr5 21779991 21780119 -181305413 + AluSq/x SINE Alu 1 129 -183 244 203 153 17 chr5 21780473 21780591 -181304941 + Charlie7 DNA MER1_type 23 156 -2456 1603 195 3 0 chr5 21780657 21780939 -181304593 + AluJb SINE Alu 1 283 -29 4085 183 35 26 chr5 21781962 21782926 -181302606 + L1PB3 LINE L1 5157 6127 -27 339 236 34 11 chr5 21783129 21783218 -181302314 + L1PB3 LINE L1 6064 6154 0 2078 122 7 7 chr5 21783637 21783932 -181301600 - AluSc SINE Alu -14 295 1 1221 240 0 24 chr5 21786017 21786309 -181299223 + AluJb SINE Alu 5 289 -23 4097 201 31 50 chr5 21787176 21788438 -181297094 + L1MA8 LINE L1 5032 6265 -26 1234 266 16 16 chr5 21788457 21788840 -181296692 + L1MC1 LINE L1 5946 6328 -5 1114 271 29 4 chr5 21789948 21790229 -181295303 + AluJb SINE Alu 1 288 -14 268 331 27 14 chr5 21791092 21791240 -181294292 + L1MCa LINE L1 6 155 -6271 4579 199 40 25 chr5 21791273 21792786 -181292746 + L1MA8 LINE L1 4727 6266 -25 1402 262 9 5 chr5 21792812 21793174 -181292358 + L1MC1 LINE L1 5961 6316 -17 216 115 58 19 chr5 21793335 21793387 -181292145 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 4684 104 9 0 chr5 21795302 21795966 -181289566 + L1PA8 LINE L1 5467 6136 -36 374 147 39 108 chr5 21796075 21796139 -181289393 + MER20B DNA MER1_type 475 527 -256 2754 133 26 12 chr5 21796139 21796561 -181288971 + MSTA LTR MaLR 1 428 0 374 147 39 108 chr5 21796561 21796625 -181288907 + MER20B DNA MER1_type 527 594 -189 273 208 0 0 chr5 21796724 21796777 -181288755 + MER116 DNA Mariner 1 53 -27 888 146 0 28 chr5 21797416 21797560 -181287972 + FLAM_C SINE Alu 4 143 0 450 285 87 49 chr5 21798804 21799359 -181286173 + L1MCa LINE L1 998 1573 -5034 2038 123 41 0 chr5 21799759 21800052 -181285480 - AluSq SINE Alu -8 305 1 189 184 26 0 chr5 21800264 21800302 -181285230 - MIR SINE MIR -6 256 218 * 195 225 25 0 chr5 21800268 21800308 -181285224 - L2 LINE L2 -16 3256 3216 * 203 162 27 0 chr5 21800277 21800314 -181285218 + L2 LINE L2 1242 1279 -2035 2214 114 0 0 chr5 21801300 21801606 -181283926 + AluSc SINE Alu 1 306 -3 611 334 93 25 chr5 21803041 21803517 -181282015 + L2 LINE L2 2638 3163 -150 2029 159 0 0 chr5 21803517 21803818 -181281714 - AluSx SINE Alu -11 301 1 611 334 93 25 chr5 21803818 21803958 -181281574 + L2 LINE L2 3163 3292 -21 2055 151 40 57 chr5 21804058 21804429 -181281103 + MER47A DNA MER2_type 1 365 -1 189 74 0 0 chr5 21804430 21804457 -181281075 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 380 156 0 13 chr5 21804456 21804533 -181280999 + (TA)n Simple_repeat Simple_repeat 1 76 0 276 30 0 0 chr5 21804563 21804596 -181280936 + (TG)n Simple_repeat Simple_repeat 1 33 0 208 122 0 49 chr5 21805375 21805416 -181280116 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 375 331 19 38 chr5 21806696 21806853 -181278679 - MIR SINE MIR -108 154 1 1564 178 31 14 chr5 21806899 21807192 -181278340 + AluSx SINE Alu 6 303 -9 539 116 0 21 chr5 21807192 21807287 -181278245 + (GGGGA)n Simple_repeat Simple_repeat 2 94 0 1167 120 6 0 chr5 21807313 21807471 -181278061 - AluSx SINE Alu -153 159 1 228 216 27 54 chr5 21807697 21807771 -181277761 + GA-rich Low_complexity Low_complexity 4 75 0 506 227 39 121 chr5 21807829 21808216 -181277316 - L1MC4 LINE L1 0 8042 7688 203 333 11 0 chr5 21811202 21811295 -181274237 + GA-rich Low_complexity Low_complexity 1 94 0 1744 142 35 48 chr5 21811674 21811985 -181273547 + AluJo SINE Alu 1 307 -5 498 335 107 5 chr5 21812089 21812286 -181273246 - MIR SINE MIR -2 260 44 231 343 71 52 chr5 21813285 21813495 -181272037 - MIR SINE MIR -2 260 47 735 269 165 35 chr5 21815181 21815910 -181269622 + L2 LINE L2 2483 3310 -3 669 267 0 0 chr5 21816827 21816947 -181268585 + FLAM_A SINE Alu 1 120 -13 22 43 0 21 chr5 21816953 21816984 -181268548 + AT_rich Low_complexity Low_complexity 1 32 -14 1691 152 11 11 chr5 21816984 21817253 -181268279 + AluJb SINE Alu 17 285 -27 22 43 0 21 chr5 21817253 21817268 -181268264 + AT_rich Low_complexity Low_complexity 32 46 0 216 226 0 38 chr5 21817273 21817326 -181268206 + MIR SINE MIR 212 262 0 22 35 0 0 chr5 21817549 21817578 -181267954 + AT_rich Low_complexity Low_complexity 1 29 0 450 0 0 0 chr5 21817763 21817813 -181267719 + (AATAG)n Simple_repeat Simple_repeat 1 50 0 2494 83 3 0 chr5 21817824 21818136 -181267396 + AluSp SINE Alu 1 313 0 480 286 91 42 chr5 21819495 21819848 -181265684 - MLT1E3 LTR MaLR 0 624 255 331 295 31 8 chr5 21820091 21820220 -181265312 - MLT1E3 LTR MaLR -522 132 1 866 219 77 48 chr5 21820389 21820804 -181264728 + Charlie2 DNA MER1_type 2404 2830 -32 25 31 0 0 chr5 21821096 21821128 -181264404 + AT_rich Low_complexity Low_complexity 1 32 0 336 218 127 9 chr5 21821968 21822078 -181263454 + Charlie7 DNA MER1_type 25 147 -2465 1313 180 3 113 chr5 21822147 21822474 -181263058 + AluSp SINE Alu 13 303 -10 25 0 0 0 chr5 21822763 21822788 -181262744 + AT_rich Low_complexity Low_complexity 1 25 0 27 29 0 0 chr5 21823149 21823183 -181262349 + AT_rich Low_complexity Low_complexity 1 34 0 197 108 27 0 chr5 21824130 21824167 -181261365 + (TG)n Simple_repeat Simple_repeat 2 39 0 37 62 0 0 chr5 21824259 21824324 -181261208 + AT_rich Low_complexity Low_complexity 1 65 0 207 127 55 18 chr5 21824547 21824602 -181260930 + (TA)n Simple_repeat Simple_repeat 2 58 0 320 230 30 30 chr5 21824602 21824702 -181260830 + L1MC4 LINE L1 6604 6703 -1339 181 315 127 61 chr5 21824744 21825153 -181260379 + L2 LINE L2 1456 1891 -1423 2173 89 34 3 chr5 21825273 21825564 -181259968 - AluSg SINE Alu -10 300 1 2306 107 3 7 chr5 21826684 21826993 -181258539 - AluSp SINE Alu -5 308 1 859 232 61 52 chr5 21827115 21827443 -181258089 + MLT1C LTR MaLR 137 467 0 742 241 41 24 chr5 21827851 21828021 -181257511 - MER45A DNA AcHobo -1 177 5 266 213 37 19 chr5 21828535 21828643 -181256889 + (TTATA)n Simple_repeat Simple_repeat 5 114 0 226 67 0 0 chr5 21828669 21828699 -181256833 - Alu SINE Alu -11 291 262 255 59 0 0 chr5 21828735 21828769 -181256763 - Alu SINE Alu -7 295 262 1962 129 24 7 chr5 21828804 21829099 -181256433 - AluSx SINE Alu -12 300 1 11610 166 1 22 chr5 21829168 21829378 -181256154 - L1PA14 LINE L1 -1 6160 5947 1917 153 14 7 chr5 21829378 21829672 -181255860 - AluSx SINE Alu -16 296 1 11610 166 1 22 chr5 21829672 21832312 -181253220 - L1PA14 LINE L1 -214 5947 3373 1719 170 7 14 chr5 21832416 21832705 -181252827 - AluJo SINE Alu -23 289 3 6600 128 28 16 chr5 21832723 21834200 -181251332 - L1MA3 LINE L1 0 6305 4810 388 349 31 5 chr5 21835060 21835255 -181250277 - MIR SINE MIR -6 256 57 198 71 0 0 chr5 21836064 21836092 -181249440 + (CA)n Simple_repeat Simple_repeat 2 29 0 273 29 0 0 chr5 21836612 21836646 -181248886 + (CA)n Simple_repeat Simple_repeat 2 35 0 2130 130 0 13 chr5 21838114 21838415 -181247117 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 21838473 21838494 -181247038 + AT_rich Low_complexity Low_complexity 1 21 0 1859 160 0 14 chr5 21838500 21838793 -181246739 - AluJb SINE Alu -23 289 1 2339 206 47 30 chr5 21838851 21839417 -181246115 - L1MB8 LINE L1 0 6178 5600 2214 117 0 3 chr5 21839417 21839717 -181245815 - AluSq SINE Alu -14 299 1 2339 206 47 30 chr5 21839717 21839748 -181245784 - L1MB8 LINE L1 -578 5600 5571 2323 157 100 25 chr5 21840737 21840768 -181244764 + MLT1D LTR MaLR 1 28 -477 306 0 0 0 chr5 21840768 21840802 -181244730 + (CA)n Simple_repeat Simple_repeat 1 34 0 2323 157 100 25 chr5 21840802 21841240 -181244292 + MLT1D LTR MaLR 28 505 0 2030 142 3 7 chr5 21842130 21842433 -181243099 + AluSx SINE Alu 1 302 -10 269 297 42 68 chr5 21843717 21843835 -181241697 + MER102a DNA MER1_type 213 327 -3 1005 178 91 17 chr5 21844031 21844261 -181241271 + L1M4 LINE L1 5321 5567 -607 804 183 27 27 chr5 21844332 21844518 -181241014 - MER5A DNA MER1_type -3 186 1 545 290 107 34 chr5 21844532 21844860 -181240672 - MLT1I LTR MaLR -57 352 1 242 106 21 0 chr5 21845285 21845332 -181240200 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 26 0 0 0 chr5 21846290 21846316 -181239216 + AT_rich Low_complexity Low_complexity 1 26 0 441 255 57 126 chr5 21846726 21846895 -181238637 + MIR SINE MIR 33 212 -50 1939 83 0 30 chr5 21846895 21847183 -181238349 + AluSg SINE Alu 24 303 0 441 255 57 126 chr5 21847183 21847235 -181238297 + MIR SINE MIR 212 239 -23 2280 138 11 8 chr5 21847235 21847589 -181237943 + THE1A LTR MaLR 1 355 0 441 255 57 126 chr5 21847589 21847612 -181237920 + MIR SINE MIR 239 262 0 2250 117 3 3 chr5 21847950 21848258 -181237274 + AluSq SINE Alu 1 308 -5 782 192 13 13 chr5 21848540 21848691 -181236841 + LTR23 LTR ERV1 1 151 -286 741 197 42 104 chr5 21848768 21849001 -181236531 + LTR56 LTR ERV1 167 380 -57 2207 134 3 0 chr5 21849001 21849306 -181236226 - AluSx SINE Alu -6 306 1 741 197 42 104 chr5 21849306 21849361 -181236171 + LTR56 LTR ERV1 380 437 0 1279 177 5 5 chr5 21849401 21849621 -181235911 + MLT2B2 LTR ERVL 1 220 -295 477 270 23 46 chr5 21849625 21849813 -181235719 - MER93b LTR ERV1 -4 399 192 1438 201 5 19 chr5 21849948 21850307 -181235225 + MLT2B1 LTR ERVL 211 520 0 2372 127 33 28 chr5 21850329 21850691 -181234841 - THE1B LTR MaLR 0 364 1 207 211 0 0 chr5 21851346 21851384 -181234148 + GA-rich Low_complexity Low_complexity 3 40 0 196 309 15 59 chr5 21851863 21851931 -181233601 - MER5A DNA MER1_type -64 125 61 1491 183 26 15 chr5 21852324 21852597 -181232935 - AluJo SINE Alu -32 280 5 2613 120 8 19 chr5 21852693 21853061 -181232471 - THE1B LTR MaLR 0 364 1 1341 211 50 74 chr5 21853869 21854379 -181231153 - MLT1F1 LTR MaLR -71 496 1 325 285 118 68 chr5 21854663 21855003 -181230529 - MLT1K LTR MaLR -36 552 196 2077 110 7 4 chr5 21855281 21855678 -181229854 - AluSx SINE Alu 0 398 1 363 194 0 0 chr5 21856225 21856287 -181229245 + AluJ/FRAM SINE Alu 222 283 -19 327 25 0 0 chr5 21856500 21856540 -181228992 + (TG)n Simple_repeat Simple_repeat 1 40 0 223 245 0 0 chr5 21857330 21857379 -181228153 - L2 LINE L2 0 3313 3265 638 305 110 40 chr5 21857507 21857885 -181227647 - L2 LINE L2 -212 3060 2652 1769 122 108 11 chr5 21857885 21858164 -181227368 + AluSx SINE Alu 1 306 -6 638 305 110 40 chr5 21858164 21858208 -181227324 - L2 LINE L2 -620 2652 2612 2039 163 8 58 chr5 21858340 21858647 -181226885 - MLT1A1 LTR MaLR -1 364 78 2333 93 3 10 chr5 21858647 21858957 -181226575 + AluSc SINE Alu 2 309 0 2039 163 8 58 chr5 21858957 21859030 -181226502 - MLT1A1 LTR MaLR -287 78 3 254 198 71 71 chr5 21859052 21859178 -181226354 + Charlie7 DNA MER1_type 2453 2578 -34 1373 188 86 0 chr5 21859178 21859295 -181226237 + AluJo SINE Alu 5 111 -201 297 0 0 0 chr5 21859295 21859328 -181226204 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1373 188 86 0 chr5 21859328 21859466 -181226066 + AluJo SINE Alu 111 282 -30 286 283 53 0 chr5 21859570 21859683 -181225849 - L2 LINE L2 -706 2608 2490 2870 123 34 5 chr5 21860264 21860614 -181224918 + MSTA LTR MaLR 1 366 -62 2093 117 30 3 chr5 21860614 21860914 -181224618 - AluSg SINE Alu -2 308 1 2870 123 34 5 chr5 21860914 21860979 -181224553 + MSTA LTR MaLR 366 428 0 485 88 0 15 chr5 21861816 21861884 -181223648 + 7SK RNA RNA 127 193 0 2194 101 3 10 chr5 21862040 21862338 -181223194 - AluSp SINE Alu -17 296 1 2230 125 3 0 chr5 21862364 21862667 -181222865 + AluSx SINE Alu 1 304 -8 1969 191 58 25 chr5 21863124 21863573 -181221959 - MLT1D LTR MaLR -41 464 1 260 49 0 73 chr5 21863593 21863634 -181221898 + LTR67 LTR ERVL 102 139 -418 * 756 162 111 79 chr5 21863625 21863711 -181221821 + MER96B DNA MER1_type? 9 91 -326 2145 135 0 0 chr5 21863711 21864008 -181221524 - AluSx SINE Alu -15 297 1 756 162 111 79 chr5 21864008 21864137 -181221395 + MER96B DNA MER1_type? 91 231 -186 345 331 52 7 chr5 21864378 21864532 -181221000 + LTR67 LTR ERVL 394 554 -3 2265 100 3 13 chr5 21864676 21864986 -181220546 + AluSx SINE Alu 5 311 -1 575 148 0 9 chr5 21866299 21866407 -181219125 + (TTCC)n Simple_repeat Simple_repeat 4 110 0 228 89 0 54 chr5 21866452 21866508 -181219024 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 1286 191 12 8 chr5 21866531 21866783 -181218749 - AluJb SINE Alu -1 311 59 234 211 66 26 chr5 21866951 21867027 -181218505 - LTR33A LTR ERVL -6 517 439 820 136 0 0 chr5 21867584 21867702 -181217830 + FLAM_C SINE Alu 1 118 -25 27 0 0 0 chr5 21867702 21867729 -181217803 + AT_rich Low_complexity Low_complexity 1 27 0 636 330 82 28 chr5 21867749 21868215 -181217317 - L2 LINE L2 -12 3301 2811 1811 150 0 0 chr5 21868950 21869072 -181216460 + AluJb SINE Alu 1 122 -190 298 0 48 0 chr5 21869072 21869114 -181216418 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1811 150 0 0 chr5 21869114 21869271 -181216261 + AluJb SINE Alu 121 280 -32 230 196 22 0 chr5 21870884 21870930 -181214602 + L2 LINE L2 3214 3260 -12 2195 109 0 0 chr5 21871029 21871342 -181214190 - AluSq SINE Alu 0 313 1 332 236 136 26 chr5 21871471 21871662 -181213870 - L1MC5 LINE L1 -210 7751 7540 2556 122 25 0 chr5 21871732 21872085 -181213447 + THE1B LTR MaLR 3 364 0 225 130 43 22 chr5 21872218 21872264 -181213268 - THE1B LTR MaLR 0 355 309 * 953 116 102 0 chr5 21872245 21872392 -181213140 - THE1B LTR MaLR -202 162 1 209 160 0 40 chr5 21872393 21872443 -181213089 + (CATA)n Simple_repeat Simple_repeat 4 51 0 1354 155 28 1 chr5 21872464 21872745 -181212787 - MLT2C2 LTR ERVL -67 330 1 2153 120 6 19 chr5 21873035 21873351 -181212181 + AluSx SINE Alu 1 312 0 4927 121 10 0 chr5 21873469 21874156 -181211376 - L1PA15 LINE L1 -4 6161 5468 1740 210 9 9 chr5 21874467 21874810 -181210722 + MLT2C1 LTR ERVL 3 345 -52 216 184 0 0 chr5 21874815 21874853 -181210679 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 256 152 22 0 chr5 21874865 21874911 -181210621 + MLT2C1 LTR ERVL 350 396 -1 276 211 0 13 chr5 21875277 21875353 -181210179 + (TA)n Simple_repeat Simple_repeat 1 75 0 3073 161 59 51 chr5 21876958 21877565 -181207967 - LTR9 LTR ERV1 0 612 1 1723 113 0 0 chr5 21877926 21878156 -181207376 - AluSx SINE Alu -17 295 66 1031 176 111 111 chr5 21878156 21878598 -181206934 - LTR7 LTR ERV1 -7 443 2 560 115 0 13 chr5 21878598 21878676 -181206856 - AluSx SINE Alu -235 78 2 1090 208 253 5 chr5 21879029 21879404 -181206128 + MER110 LTR ERV1 10 477 -14 1653 172 3 27 chr5 21879661 21879958 -181205574 + AluJo SINE Alu 1 290 -22 2114 118 0 26 chr5 21879958 21880262 -181205270 - AluSx SINE Alu -16 296 1 35 0 0 0 chr5 21880268 21880303 -181205229 + AT_rich Low_complexity Low_complexity 1 35 0 485 300 70 30 chr5 21880737 21880845 -181204687 - L1ME4a LINE L1 -279 5842 5740 195 42 0 0 chr5 21880845 21880869 -181204663 + (TA)n Simple_repeat Simple_repeat 2 25 0 485 300 70 30 chr5 21880869 21881030 -181204502 - L1ME4a LINE L1 -381 5740 5562 610 286 119 69 chr5 21881890 21882503 -181203029 - L2 LINE L2 -15 3298 2633 2251 96 3 0 chr5 21882503 21882796 -181202736 + AluSx SINE Alu 8 301 -11 610 286 119 69 chr5 21882796 21882903 -181202629 - L2 LINE L2 -680 2633 2533 1903 226 79 92 chr5 21882906 21882968 -181202564 - MER21B LTR ERV1 -75 788 727 180 0 0 0 chr5 21882968 21882988 -181202544 + (CAATT)n Simple_repeat Simple_repeat 2 21 0 1903 226 79 92 chr5 21882988 21883722 -181201810 - MER21B LTR ERV1 -136 727 2 2112 113 10 0 chr5 21884839 21885130 -181200402 - AluSx SINE Alu -18 294 1 234 224 37 84 chr5 21885452 21885559 -181199973 + Charlie7 DNA MER1_type 3 104 -2508 256 253 105 11 chr5 21885742 21885837 -181199695 - MER5A DNA MER1_type -43 146 43 2122 127 3 3 chr5 21885846 21886153 -181199379 - AluSx SINE Alu -5 307 1 1863 160 0 29 chr5 21886153 21886459 -181199073 - AluJo SINE Alu -15 297 1 669 322 34 39 chr5 21886969 21887326 -181198206 + Charlie2 DNA MER1_type 10 364 -2498 857 183 70 111 chr5 21887329 21887432 -181198100 + Charlie2 DNA MER1_type 2231 2337 -525 2208 110 3 16 chr5 21887432 21887742 -181197790 - AluSx SINE Alu -6 306 1 857 183 70 111 chr5 21887742 21888023 -181197509 + Charlie2 DNA MER1_type 2337 2597 -265 1645 168 56 11 chr5 21888023 21888309 -181197223 - AluJo SINE Alu -13 299 1 857 183 70 111 chr5 21888309 21888365 -181197167 + Charlie2 DNA MER1_type 2597 2654 -208 7544 20 13 0 chr5 21888408 21889274 -181196258 - L1PA4 LINE L1 -1 6154 5278 497 131 0 65 chr5 21889274 21889381 -181196151 + Charlie2 DNA MER1_type 2694 2793 -69 184 315 9 18 chr5 21889562 21889673 -181195859 - L2 LINE L2 -1641 1673 1564 233 163 20 0 chr5 21891332 21891381 -181194151 + CT-rich Low_complexity Low_complexity 6 55 0 7258 60 42 3 chr5 21891862 21892944 -181192588 - L1PA7 LINE L1 0 6154 5062 1986 125 4 4 chr5 21892944 21893225 -181192307 - AluSx SINE Alu -31 281 1 7258 60 42 3 chr5 21893225 21893263 -181192269 - L1PA7 LINE L1 -1092 5062 5027 2120 125 0 3 chr5 21893594 21893889 -181191643 - AluSx SINE Alu -18 294 1 564 272 10 41 chr5 21893904 21894099 -181191433 + L2 LINE L2 3116 3304 -9 284 300 50 10 chr5 21897166 21897266 -181188266 - MIR3 SINE MIR -24 184 81 2012 130 0 7 chr5 21897522 21897806 -181187726 + AluSx SINE Alu 1 282 -30 1913 244 58 50 chr5 21897984 21898570 -181186962 + MLT1E LTR MaLR 1 591 -2 284 308 144 0 chr5 21898937 21899083 -181186449 - MIR SINE MIR -77 185 19 2228 116 3 0 chr5 21899112 21899406 -181186126 + AluSx SINE Alu 1 295 -17 249 139 0 0 chr5 21900157 21900200 -181185332 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 458 274 186 51 chr5 21900681 21901053 -181184479 + L2 LINE L2 1138 1559 -1755 1675 283 82 13 chr5 21901077 21901625 -181183907 + MLT1E LTR MaLR 4 589 -4 1261 175 62 19 chr5 21901713 21902022 -181183510 - MER33 DNA MER1_type -2 322 1 2155 103 3 13 chr5 21902040 21902340 -181183192 + AluSq SINE Alu 1 297 -16 1997 141 10 0 chr5 21902377 21902683 -181182849 - AluSx SINE Alu 0 312 4 875 141 0 8 chr5 21902723 21902851 -181182681 + FLAM_C SINE Alu 2 128 -5 393 117 0 0 chr5 21902851 21902911 -181182621 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 2080 131 3 0 chr5 21904142 21904432 -181181100 - AluSq SINE Alu -22 291 1 22 0 0 0 chr5 21904432 21904454 -181181078 + AT_rich Low_complexity Low_complexity 1 22 0 1927 153 0 3 chr5 21904454 21904742 -181180790 - AluSx SINE Alu -25 287 1 345 232 56 136 chr5 21904989 21905239 -181180293 + MLT1J LTR MaLR 226 455 -56 2124 136 7 0 chr5 21905374 21905682 -181179850 - AluSx SINE Alu -2 310 1 2404 78 0 3 chr5 21906276 21906570 -181178962 - AluY SINE Alu -18 293 1 234 316 0 0 chr5 21908558 21908634 -181176898 - Charlie2a DNA MER1_type -1125 1737 1662 235 308 58 25 chr5 21910642 21910762 -181174770 - MLT1E3 LTR MaLR -346 278 155 3686 207 32 32 chr5 21911283 21912668 -181172864 - L1MA8 LINE L1 -178 6113 4723 413 303 20 13 chr5 21912692 21912844 -181172688 - L1MCa LINE L1 -6268 158 6 28 29 0 0 chr5 21913021 21913056 -181172476 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 21913323 21913346 -181172186 + AT_rich Low_complexity Low_complexity 1 23 0 1039 244 70 15 chr5 21913713 21913984 -181171548 - AluJb SINE Alu -16 286 1 208 146 0 55 chr5 21914959 21915014 -181170518 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 845 108 0 0 chr5 21915187 21915298 -181170234 - AluSq/x SINE Alu -202 111 1 1695 175 0 10 chr5 21915521 21915838 -181169694 + AluSx SINE Alu 3 316 0 239 247 65 11 chr5 21916043 21916136 -181169396 + MLT1E3 LTR MaLR 12 109 -545 556 277 118 45 chr5 21916192 21916614 -181168918 + MLT1E3 LTR MaLR 172 624 0 272 306 19 102 chr5 21919712 21919918 -181165614 - MLT1L LTR MaLR -204 411 223 348 305 46 15 chr5 21923044 21923175 -181162357 + MIR3 SINE MIR 33 167 -41 1832 132 189 11 chr5 21924372 21924743 -181160789 - LTR23 LTR ERV1 0 437 1 327 231 0 0 chr5 21925414 21925548 -181159984 + (TG)n Simple_repeat Simple_repeat 2 135 0 240 138 73 0 chr5 21925884 21925993 -181159539 + (TTATA)n Simple_repeat Simple_repeat 4 120 0 180 152 0 0 chr5 21926201 21926234 -181159298 + T-rich Low_complexity Low_complexity 3 35 0 2251 166 54 29 chr5 21928022 21928468 -181157064 - MLT1C LTR MaLR -10 457 1 2093 108 31 0 chr5 21928649 21928936 -181156596 + AluSg SINE Alu 1 296 -14 2826 125 31 7 chr5 21928970 21929387 -181156145 + MSTA LTR MaLR 1 427 -1 272 212 0 45 chr5 21929676 21929742 -181155790 + MLT1K LTR MaLR 49 111 -456 2633 209 22 24 chr5 21929742 21930027 -181155505 + L1MD3 LINE L1 7403 7687 -308 1943 136 0 52 chr5 21930027 21930337 -181155195 + AluSx SINE Alu 1 294 -18 2633 209 22 24 chr5 21930337 21930645 -181154887 + L1MD3 LINE L1 7687 7995 0 997 229 9 9 chr5 21931504 21931722 -181153810 - MLT2B1 LTR ERVL -300 220 3 559 276 114 14 chr5 21931726 21931936 -181153596 + MLT1K LTR MaLR 75 305 -244 1745 194 7 3 chr5 21932230 21932540 -181152992 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr5 21932737 21932758 -181152774 + AT_rich Low_complexity Low_complexity 1 21 0 1774 144 81 11 chr5 21933806 21934090 -181151442 - AluJb SINE Alu -8 304 1 237 352 74 0 chr5 21934159 21934267 -181151265 - L2 LINE L2 -6 3307 3192 593 271 107 20 chr5 21934892 21935136 -181150396 + MLT1K LTR MaLR 322 586 -2 380 237 59 41 chr5 21935291 21935460 -181150072 + HAL1b LINE L1 663 834 -514 2066 70 0 79 chr5 21935616 21935650 -181149882 - AluY SINE Alu -1 310 275 2208 65 0 81 chr5 21935650 21935972 -181149560 - AluY SINE Alu 0 311 16 2066 70 0 79 chr5 21935972 21936252 -181149280 - AluY SINE Alu -36 275 21 2326 45 0 21 chr5 21936253 21936541 -181148991 - AluY SINE Alu -29 282 1 1002 229 69 28 chr5 22136714 22137076 -180948456 + L1MC3 LINE L1 4619 4995 -1151 1377 228 3 13 chr5 22137096 22137399 -180948133 + AluJo SINE Alu 12 311 -1 2672 219 101 32 chr5 22137403 22138572 -180946960 + L1MC3 LINE L1 5000 5395 -751 258 301 7 21 chr5 22138609 22138752 -180946780 + L1M4 LINE L1 4559 4699 -1447 830 250 88 45 chr5 22138823 22139298 -180946234 + L1M4 LINE L1 2938 3448 -2698 2197 103 6 13 chr5 22139298 22139610 -180945922 + AluSg SINE Alu 1 310 0 830 250 88 45 chr5 22139610 22139773 -180945759 + L1M4 LINE L1 3448 3603 -2543 2254 95 89 11 chr5 22140054 22140402 -180945130 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr5 22140465 22140500 -180945032 + AT_rich Low_complexity Low_complexity 1 35 0 31 92 0 0 chr5 22141585 22141672 -180943860 + AT_rich Low_complexity Low_complexity 1 87 0 1224 217 38 28 chr5 22143088 22143406 -180942126 + L1MB4 LINE L1 5860 6180 0 1557 209 67 35 chr5 22143407 22143987 -180941545 + L1MC5 LINE L1 7326 7924 -37 918 237 23 47 chr5 22144228 22144528 -180941004 - L1ME LINE L1 -420 5746 5454 1908 144 3 3 chr5 22144643 22144935 -180940597 - AluSx SINE Alu -20 292 1 183 129 0 0 chr5 22144991 22145022 -180940510 + (TG)n Simple_repeat Simple_repeat 2 32 0 246 135 0 0 chr5 22145024 22145061 -180940471 + MLT2D LTR ERVL 378 414 0 2719 22 0 0 chr5 22145116 22145427 -180940105 + AluY SINE Alu 1 311 0 1732 128 99 0 chr5 22145896 22146169 -180939363 - AluSx SINE Alu -7 305 6 372 309 21 0 chr5 22146225 22146322 -180939210 - MLT1G1 LTR MaLR -421 174 76 26 0 0 0 chr5 22147718 22147744 -180937788 + AT_rich Low_complexity Low_complexity 1 26 0 35 24 0 0 chr5 22148345 22148387 -180937145 + AT_rich Low_complexity Low_complexity 1 42 0 205 149 43 0 chr5 22148708 22148755 -180936777 + (TA)n Simple_repeat Simple_repeat 1 49 0 1876 128 4 0 chr5 22148809 22149075 -180936457 + AluSg SINE Alu 37 303 -7 49 43 0 0 chr5 22150238 22150308 -180935224 + AT_rich Low_complexity Low_complexity 1 70 0 850 118 15 0 chr5 22151564 22151700 -180933832 - L1PA14 LINE L1 -3 6158 6021 11371 192 39 7 chr5 22151701 22155524 -180930008 - L1PA12 LINE L1 -1938 5646 1697 287 299 68 20 chr5 22155805 22155952 -180929580 + L1MEc LINE L1 1628 1781 -4615 264 305 66 12 chr5 22156028 22156195 -180929337 + L1MEc LINE L1 1907 2082 -4314 1644 191 3 0 chr5 22156283 22156565 -180928967 - AluJo SINE Alu -23 289 7 22 0 0 0 chr5 22156584 22156606 -180928926 + AT_rich Low_complexity Low_complexity 1 22 0 321 269 122 21 chr5 22156897 22157097 -180928435 + L1MEc LINE L1 2474 2711 -3504 3099 135 22 8 chr5 22157097 22157587 -180927945 - LOR1a LTR ERV1 0 497 1 321 269 122 21 chr5 22157587 22157665 -180927867 + L1MEc LINE L1 2711 2780 -3435 2101 97 7 30 chr5 22157733 22158032 -180927500 - AluSg SINE Alu -18 292 1 21 36 0 0 chr5 22158743 22158771 -180926761 + AT_rich Low_complexity Low_complexity 1 28 0 396 184 10 19 chr5 22158834 22158937 -180926595 + L1MA4 LINE L1 6197 6298 -2 24 32 0 0 chr5 22159121 22159152 -180926380 + AT_rich Low_complexity Low_complexity 1 31 0 1582 203 101 0 chr5 22160120 22160436 -180925096 - MER7A DNA MER2_type 0 346 1 21 0 0 0 chr5 22160779 22160800 -180924732 + AT_rich Low_complexity Low_complexity 1 21 0 1444 188 3 39 chr5 22160810 22161118 -180924414 + AluJb SINE Alu 3 299 -13 200 143 29 0 chr5 22161688 22161723 -180923809 + (TA)n Simple_repeat Simple_repeat 1 36 0 10079 196 74 24 chr5 22161777 22162684 -180922848 + L1MCa LINE L1 16 877 -5730 419 122 61 0 chr5 22162684 22162766 -180922766 - L1PA13 LINE L1 -1 6162 6076 10079 196 74 24 chr5 22162766 22164374 -180921158 + L1MCa LINE L1 877 2693 -3914 242 129 24 5 chr5 22164474 22164526 -180921006 - THE1A LTR MaLR -259 96 45 1155 250 11 39 chr5 22164567 22164927 -180920605 + L1M4 LINE L1 4516 4865 -1281 245 203 51 0 chr5 22164938 22164997 -180920535 - MSTB1 LTR MaLR -13 419 358 1916 154 36 36 chr5 22164997 22165361 -180920171 - THE1B LTR MaLR 0 364 1 340 333 0 9 chr5 22165473 22165587 -180919945 - L1ME LINE L1 -5059 1325 1213 386 288 79 43 chr5 22165596 22166130 -180919402 - L1ME LINE L1 -5075 1297 745 230 166 95 136 chr5 22166332 22166501 -180919031 - L1ME LINE L1 -5859 513 352 2166 93 10 0 chr5 22166548 22166839 -180918693 + AluSq SINE Alu 1 294 -19 1009 181 12 81 chr5 22167349 22167608 -180917924 - MER65C LTR ERV1 0 461 221 270 191 91 55 chr5 22167700 22167810 -180917722 - MER51D LTR ERV1 -43 614 501 2009 116 4 0 chr5 22168003 22168302 -180917230 - AluSc SINE Alu 0 302 3 1085 215 14 5 chr5 22168590 22168813 -180916719 - MER65C LTR ERV1 -236 225 1 207 214 0 0 chr5 22170197 22170239 -180915293 + A-rich Low_complexity Low_complexity 2 43 0 24 32 0 0 chr5 22172210 22172241 -180913291 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 22172346 22172381 -180913151 + AT_rich Low_complexity Low_complexity 1 35 0 792 277 81 39 chr5 22173778 22173952 -180911580 - MLT1D LTR MaLR -2 503 338 2167 80 6 68 chr5 22173952 22174277 -180911255 + AluSq SINE Alu 1 305 -8 792 277 81 39 chr5 22174277 22174585 -180910947 - MLT1D LTR MaLR -167 338 1 1300 232 33 129 chr5 22174608 22175129 -180910403 - MLT1D-int LTR MaLR -24 1347 877 2053 244 28 62 chr5 22175208 22175996 -180909536 - MLT1D-int LTR MaLR -488 883 5 793 261 82 76 chr5 22176000 22176341 -180909191 - MLT1D LTR MaLR 0 505 125 215 355 55 18 chr5 22177364 22177474 -180908058 + MIR SINE MIR 1 114 -148 357 336 28 49 chr5 22177609 22177933 -180907599 + MLT1I LTR MaLR 76 392 -17 260 229 124 9 chr5 22177942 22178047 -180907485 + MIR SINE MIR 146 262 0 1783 107 8 4 chr5 22178133 22178385 -180907147 + AluSc SINE Alu 1 253 -56 29 28 0 0 chr5 22180240 22180276 -180905256 + AT_rich Low_complexity Low_complexity 1 36 0 302 323 99 25 chr5 22180495 22180696 -180904836 - L1MC/D LINE L1 -2004 5804 5589 1947 136 45 0 chr5 22181050 22181337 -180904195 - AluSx SINE Alu -10 302 3 296 238 25 84 chr5 22181514 22181658 -180903874 + LTR41 LTR ERVL 73 226 -569 320 244 10 8 chr5 22183611 22183709 -180901823 + MLT1I LTR MaLR 71 143 -266 226 339 99 33 chr5 22183901 22184022 -180901510 + LTR67 LTR ERVL 131 259 -298 2844 205 37 18 chr5 22184210 22184835 -180900697 - LTR9B LTR ERV1 -1 643 7 246 288 81 36 chr5 22185805 22185916 -180899616 + L1ME LINE L1 121 236 -5834 431 327 23 8 chr5 22186171 22186434 -180899098 + L1M4 LINE L1 3211 3477 -2669 211 247 14 27 chr5 22186464 22186537 -180898995 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 1455 282 76 64 chr5 22186610 22187836 -180897696 + L1M4 LINE L1 3787 5043 -1103 514 162 15 167 chr5 22187957 22188155 -180897377 + L1MA8 LINE L1 5876 6043 -257 3076 171 139 5 chr5 22188669 22189295 -180896237 - Tigger1 DNA MER2_type -1 2417 1708 264 236 42 7 chr5 22189315 22189459 -180896073 + (TA)n Simple_repeat Simple_repeat 1 149 0 288 77 0 0 chr5 22189490 22189529 -180896003 + (TA)n Simple_repeat Simple_repeat 2 40 0 2388 98 37 13 chr5 22189529 22189906 -180895626 - MLT2A1 LTR ERVL -58 386 1 7905 217 40 24 chr5 22189906 22190070 -180895462 - Tigger1 DNA MER2_type -707 1711 1551 2415 114 22 3 chr5 22190070 22190438 -180895094 - THE1C LTR MaLR 0 375 1 7905 217 40 24 chr5 22190438 22191942 -180893590 - Tigger1 DNA MER2_type -867 1551 17 191 257 14 0 chr5 22192426 22192500 -180893032 + (TATG)n Simple_repeat Simple_repeat 2 76 0 798 158 0 0 chr5 22192556 22192689 -180892843 - FLAM_C SINE Alu 0 133 1 305 210 119 74 chr5 22192789 22192965 -180892567 + MER112 DNA MER1_type 65 248 -12 359 331 44 11 chr5 22193322 22193503 -180892029 - MIR SINE MIR -70 192 6 1199 198 0 117 chr5 22193549 22193745 -180891787 - AluJo SINE Alu -12 300 157 1587 72 5 0 chr5 22193745 22193940 -180891592 - AluSp SINE Alu -117 196 1 1199 198 0 117 chr5 22193940 22194076 -180891456 - AluJo SINE Alu -155 157 7 228 298 0 36 chr5 22194400 22194484 -180891048 + L3 LINE CR1 1381 1461 -116 315 179 18 0 chr5 22194536 22194592 -180890940 + L2 LINE L2 3257 3313 0 186 321 137 61 chr5 22194625 22194887 -180890645 - L3b LINE CR1 -13 1570 1289 897 228 38 0 chr5 22194961 22195145 -180890387 + MER58A DNA MER1_type 3 193 -31 22 0 0 0 chr5 22195146 22195168 -180890364 + AT_rich Low_complexity Low_complexity 1 22 0 7134 87 31 5 chr5 22195168 22197002 -180888530 - L1PA8 LINE L1 -13 6159 4297 10040 119 10 0 chr5 22197002 22198559 -180886973 + L1PA8 LINE L1 2711 4283 -1863 11568 218 27 41 chr5 22198609 22203492 -180882040 + L1PA16 LINE L1 1 4648 -2221 1918 169 36 14 chr5 22203492 22203848 -180881684 + THE1B LTR MaLR 1 364 0 11568 218 27 41 chr5 22203848 22206040 -180879492 + L1PA16 LINE L1 4648 6869 0 447 247 79 44 chr5 22206611 22206960 -180878572 - LTR15 LTR ERV1 0 595 141 24 77 0 0 chr5 22207049 22207101 -180878431 + AT_rich Low_complexity Low_complexity 1 52 0 488 147 0 0 chr5 22207732 22207807 -180877725 + L1PA16 LINE L1 6044 6118 -48 420 268 91 16 chr5 22207930 22208173 -180877359 + L1ME2 LINE L1 4476 4736 -1410 2391 73 0 3 chr5 22208173 22208474 -180877058 - AluY SINE Alu -7 304 5 341 174 81 12 chr5 22208498 22208659 -180876873 + (TA)n Simple_repeat Simple_repeat 1 172 0 316 153 58 36 chr5 22208680 22208817 -180876715 + (TA)n Simple_repeat Simple_repeat 1 140 0 308 261 27 69 chr5 22208827 22209087 -180876445 + L1ME2 LINE L1 4812 5060 -1086 200 200 25 0 chr5 22209181 22209221 -180876311 + (TG)n Simple_repeat Simple_repeat 2 42 0 1368 252 58 78 chr5 22209370 22210040 -180875492 + L1ME2 LINE L1 5360 6016 -148 2303 62 7 7 chr5 22210642 22210951 -180874581 - AluY SINE Alu -2 309 1 330 349 17 8 chr5 22213077 22213269 -180872263 + L1MC/D LINE L1 5462 5659 -510 552 324 74 71 chr5 22213662 22214271 -180871261 + L1ME3 LINE L1 5302 5915 -247 839 309 75 24 chr5 22214468 22214801 -180870731 - MLT1I LTR MaLR 0 409 60 35 63 0 0 chr5 22215411 22215474 -180870058 + AT_rich Low_complexity Low_complexity 1 63 0 206 190 25 38 chr5 22215514 22215593 -180869939 + T-rich Low_complexity Low_complexity 5 82 0 348 222 0 68 chr5 22216928 22217045 -180868487 - MER34C LTR ERV1 -3 582 474 292 177 104 73 chr5 22217332 22217428 -180868104 - MER34B LTR ERV1 -444 121 23 29 28 0 0 chr5 22217867 22217903 -180867629 + AT_rich Low_complexity Low_complexity 1 36 0 202 24 24 73 chr5 22217975 22218016 -180867516 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 186 103 0 0 chr5 22218462 22218491 -180867041 + (CAT)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr5 22220456 22220482 -180865050 + AT_rich Low_complexity Low_complexity 1 26 0 261 211 0 0 chr5 22220580 22220637 -180864895 + (CA)n Simple_repeat Simple_repeat 2 58 0 271 331 32 16 chr5 22221627 22221751 -180863781 + LTR33A LTR ERVL 61 186 -337 413 297 273 8 chr5 22221940 22222321 -180863211 + L2 LINE L2 1752 2233 -1081 324 267 85 120 chr5 22222330 22222906 -180862626 - MLT1F1 LTR MaLR -25 542 3 1066 323 141 22 chr5 22222929 22223731 -180861801 + L2 LINE L2 2258 3183 -130 2887 193 29 8 chr5 22223731 22224321 -180861211 + MER6A DNA MER2_type 4 605 0 1066 323 141 22 chr5 22224321 22224470 -180861062 + L2 LINE L2 3183 3313 0 311 260 30 0 chr5 22224518 22224618 -180860914 + (TG)n Simple_repeat Simple_repeat 2 104 0 2082 190 0 35 chr5 22224857 22224999 -180860533 - MER66B LTR ERV1 -88 398 253 2120 96 10 0 chr5 22224999 22225290 -180860242 - AluSx SINE Alu -18 294 1 2082 190 0 35 chr5 22225290 22225553 -180859979 - MER66B LTR ERV1 -233 253 7 362 390 139 12 chr5 22226227 22226802 -180858730 - L2 LINE L2 -857 2457 1810 1436 209 7 40 chr5 22227038 22227340 -180858192 - AluJb SINE Alu -10 292 1 23 0 0 0 chr5 22227473 22227496 -180858036 + AT_rich Low_complexity Low_complexity 1 23 0 874 191 46 8 chr5 22228243 22228462 -180857070 + MER61D LTR ERV1 340 501 0 23 33 0 0 chr5 22228845 22228875 -180856657 + AT_rich Low_complexity Low_complexity 1 30 0 1418 176 108 3 chr5 22228997 22229321 -180856211 - L1MC1 LINE L1 -197 6136 5779 23 68 0 0 chr5 22229358 22229402 -180856130 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 22229662 22229691 -180855841 + AT_rich Low_complexity Low_complexity 1 29 0 236 30 30 0 chr5 22230203 22230236 -180855296 + (TA)n Simple_repeat Simple_repeat 2 35 0 696 355 83 23 chr5 22230828 22231092 -180854440 + L1M3c LINE L1 1364 1611 -5885 2209 137 28 19 chr5 22231092 22231451 -180854081 + THE1B LTR MaLR 3 364 0 696 355 83 23 chr5 22231451 22231665 -180853867 + L1M3c LINE L1 1611 1871 -5625 2501 271 78 26 chr5 22231769 22232936 -180852596 + L1M3c LINE L1 2017 3100 -4465 2409 65 3 0 chr5 22232936 22233230 -180852302 + AluY SINE Alu 1 295 -16 2501 271 78 26 chr5 22233230 22233573 -180851959 + L1M3c LINE L1 3100 3424 -4141 29 0 0 0 chr5 22233847 22233876 -180851656 + AT_rich Low_complexity Low_complexity 1 29 0 2375 69 0 10 chr5 22234997 22235302 -180850230 + AluY SINE Alu 1 302 -9 200 229 0 21 chr5 22236533 22236581 -180848951 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 436 315 14 7 chr5 22238130 22238276 -180847256 + MIR SINE MIR 48 194 -68 1688 232 25 0 chr5 22238649 22239003 -180846529 + MLT1A1 LTR MaLR 1 363 -2 324 345 80 20 chr5 22239030 22239230 -180846302 + L1MEd LINE L1 71 282 -5837 23 0 0 0 chr5 22239525 22239548 -180845984 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 22239707 22239736 -180845796 + AT_rich Low_complexity Low_complexity 1 29 0 806 251 83 74 chr5 22239888 22240322 -180845210 + L1MCa LINE L1 43 406 -5639 * 2061 249 56 50 chr5 22240319 22241450 -180844082 + L1M3c LINE L1 4174 5311 -2254 2031 189 31 14 chr5 22241451 22241869 -180843663 - LOR1b LTR ERV1 0 461 37 2476 176 7 0 chr5 22242056 22242459 -180843073 - L1PA12 LINE L1 -5867 1714 1309 1573 157 61 66 chr5 22242459 22242836 -180842696 + THE1C LTR MaLR 1 375 0 7396 206 75 5 chr5 22242838 22244374 -180841158 + THE1C-int LTR MaLR 3 1646 -5 1727 168 75 9 chr5 22244381 22244726 -180840806 + THE1C LTR MaLR 5 372 -3 3041 209 4 0 chr5 22244729 22245235 -180840297 - L1PA12 LINE L1 -6274 1307 800 30 77 0 0 chr5 22245510 22245575 -180839957 + AT_rich Low_complexity Low_complexity 1 65 0 213 39 0 0 chr5 22245599 22245625 -180839907 + (TG)n Simple_repeat Simple_repeat 1 26 0 232 91 0 0 chr5 22246244 22246277 -180839255 - L1MEc LINE L1 -916 5299 5267 2350 200 4 0 chr5 22246283 22246753 -180838779 + L1P LINE L1 4035 4506 -1640 887 278 89 25 chr5 22246757 22247365 -180838167 - L1MEc LINE L1 -967 5248 4602 1231 241 20 7 chr5 22247442 22247741 -180837791 - MER58B DNA MER1_type -2 339 37 504 271 65 48 chr5 22247749 22248041 -180837491 - L1MEc LINE L1 -1827 4388 4092 1377 250 76 45 chr5 22248053 22248858 -180836674 - L1MEc LINE L1 -3185 3030 2201 3687 134 35 58 chr5 22248859 22249584 -180835948 - LTR1 LTR ERV1 0 785 78 1675 92 35 0 chr5 22249585 22249812 -180835720 - LTR12 LTR ERV1 0 714 480 277 319 9 0 chr5 22249813 22249929 -180835603 - LTR30 LTR ERV1 -80 642 526 1159 64 0 0 chr5 22249929 22250070 -180835462 - LTR12 LTR ERV1 -455 259 119 257 250 0 0 chr5 22250070 22250122 -180835410 - LTR30 LTR ERV1 -670 52 1 * 303 231 46 0 chr5 22250122 22250171 -180835361 - LTR1 LTR ERV1 -702 83 32 1806 168 3 7 chr5 22250380 22250684 -180834848 - AluSg SINE Alu -6 304 2 529 279 48 86 chr5 22250688 22251130 -180834402 - L1MEc LINE L1 -4320 2076 1670 7484 28 3 1 chr5 22251130 22252206 -180833326 + L1PA4 LINE L1 5078 6155 0 529 279 48 86 chr5 22252206 22252473 -180833059 - L1MEc LINE L1 -4726 1670 1394 26 0 0 0 chr5 22253058 22253084 -180832448 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 22253120 22253142 -180832390 + AT_rich Low_complexity Low_complexity 1 22 0 888 299 25 25 chr5 22254157 22254478 -180831054 - LTR16A LTR ERVL -102 348 28 2173 106 3 3 chr5 22254785 22255077 -180830455 + AluSx SINE Alu 3 294 -18 241 250 37 56 chr5 22255655 22255755 -180829777 - MLT1H1 LTR MaLR -2 553 456 1466 237 85 38 chr5 22255755 22256177 -180829355 + MLT2B1 LTR ERVL 1 442 -78 198 143 0 0 chr5 22256180 22256215 -180829317 + (T)n Simple_repeat Simple_repeat 1 35 0 1804 203 39 6 chr5 22256316 22256680 -180828852 + MSTA LTR MaLR 53 428 0 350 322 61 23 chr5 22256828 22257189 -180828343 + L1ME3 LINE L1 5767 6141 -23 547 241 6 13 chr5 22257598 22257756 -180827776 - LTR38B LTR ERV1 -18 592 436 794 219 12 0 chr5 22257762 22257926 -180827606 + FRAM SINE Alu 1 166 -10 400 274 100 47 chr5 22257944 22258291 -180827241 - LTR38B LTR ERV1 -191 381 1 1851 117 51 11 chr5 22259013 22259286 -180826246 - AluSx SINE Alu -28 284 1 1991 234 37 14 chr5 22259726 22260157 -180825375 + MER21B LTR ERV1 94 534 -329 387 259 105 6 chr5 22260157 22260319 -180825213 + L1M4 LINE L1 5654 5831 -331 2135 263 40 34 chr5 22260382 22260491 -180825041 - MER44D DNA MER2_type -1882 605 498 3594 172 59 17 chr5 22260491 22260827 -180824705 + MER72 LTR ERV1 1 321 -401 2293 103 0 0 chr5 22260827 22261128 -180824404 - AluSc SINE Alu -8 301 1 3594 172 59 17 chr5 22261128 22261484 -180824048 + MER72 LTR ERV1 321 722 0 2135 263 40 34 chr5 22261484 22262103 -180823429 - MER44D DNA MER2_type -1989 498 1 539 308 33 17 chr5 22262103 22262343 -180823189 + L1ME1 LINE L1 5919 6162 -4 885 217 21 5 chr5 22262929 22263118 -180822414 - MLT1B LTR MaLR -8 382 191 289 89 0 36 chr5 22263189 22263245 -180822287 + (TTC)n Simple_repeat Simple_repeat 1 54 0 2398 67 0 3 chr5 22263260 22263560 -180821972 + AluY SINE Alu 1 299 -12 1228 223 22 4 chr5 22263560 22263829 -180821703 - AluJo SINE Alu -36 276 3 567 276 0 7 chr5 22263873 22264025 -180821507 - MLT1B LTR MaLR -238 152 2 27 49 0 0 chr5 22265005 22265046 -180820486 + AT_rich Low_complexity Low_complexity 1 41 0 234 231 0 0 chr5 22265767 22265819 -180819713 - L1MEc LINE L1 -6177 219 168 446 258 163 64 chr5 22265891 22265932 -180819600 - L1M4 LINE L1 -1032 5114 5078 2081 135 7 0 chr5 22265932 22266235 -180819297 + AluSx SINE Alu 5 309 -3 446 258 163 64 chr5 22266235 22266286 -180819246 - L1M4 LINE L1 -1068 5078 5033 1939 144 10 0 chr5 22266286 22266584 -180818948 - AluSx SINE Alu -9 303 3 446 258 163 64 chr5 22266584 22267049 -180818483 - L1M4 LINE L1 -1113 5033 4501 24 53 0 0 chr5 22267282 22267320 -180818212 + AT_rich Low_complexity Low_complexity 1 38 0 364 313 126 27 chr5 22268252 22268626 -180816906 + L1M4 LINE L1 4433 4843 -1303 29 70 0 0 chr5 22268661 22268718 -180816814 + AT_rich Low_complexity Low_complexity 1 57 0 238 279 39 29 chr5 22268772 22268876 -180816656 - MER21B LTR ERV1 -272 591 487 789 280 55 8 chr5 22269777 22270159 -180815373 + L1MC1 LINE L1 2650 3049 -3097 540 276 22 0 chr5 22270695 22270880 -180814652 + L1MC1 LINE L1 3230 3418 -2728 5051 269 37 11 chr5 22270897 22272581 -180812951 + L1MC1 LINE L1 3508 5236 -910 359 228 40 0 chr5 22272583 22272684 -180812848 + L1MA9 LINE L1 6181 6285 -27 21 0 0 0 chr5 22272708 22272729 -180812803 + AT_rich Low_complexity Low_complexity 1 21 0 748 121 0 92 chr5 22272786 22272927 -180812605 + LTR12 LTR ERV1 42 169 -545 4650 142 70 0 chr5 22273014 22273837 -180811695 + L1MC1 LINE L1 5313 6193 -140 1742 71 3 160 chr5 22273857 22274195 -180811337 + LTR12 LTR ERV1 1 285 -429 302 256 11 0 chr5 22274196 22274286 -180811246 + LTR30 LTR ERV1 553 643 -79 662 82 0 0 chr5 22274287 22274372 -180811160 + LTR12 LTR ERV1 481 565 -149 422 209 90 52 chr5 22274372 22274506 -180811026 + L1MC1 LINE L1 6195 6333 0 200 365 35 30 chr5 22274635 22274832 -180810700 + L2 LINE L2 1854 2051 -1263 1876 199 48 70 chr5 22275194 22275752 -180809780 + MLT2B3 LTR ERVL 1 546 -8 30 45 0 0 chr5 22276895 22276939 -180808593 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 22277104 22277130 -180808402 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 22277167 22277202 -180808330 + AT_rich Low_complexity Low_complexity 1 35 0 3251 169 26 20 chr5 22277333 22277936 -180807596 + MER4D LTR ERV1 1 607 -296 1914 39 0 22 chr5 22277936 22278167 -180807365 - AluY SINE Alu -2 309 84 1177 68 0 56 chr5 22278167 22278329 -180807203 - AluY SINE Alu -158 153 1 1055 165 181 34 chr5 22278340 22278577 -180806955 + MER4D LTR ERV1 603 874 -29 40 59 0 0 chr5 22278580 22278648 -180806884 + AT_rich Low_complexity Low_complexity 1 68 0 21 0 0 0 chr5 22278953 22278974 -180806558 + AT_rich Low_complexity Low_complexity 1 21 0 2792 165 162 18 chr5 22279038 22279649 -180805883 - LTR34 LTR ERV1 0 699 1 2094 152 16 31 chr5 22279652 22280033 -180805499 - THE1C LTR MaLR 0 375 1 2074 120 7 13 chr5 22280079 22280388 -180805144 - AluSx SINE Alu -5 307 1 2442 70 0 3 chr5 22280746 22281045 -180804487 + AluY SINE Alu 1 298 -13 401 270 45 25 chr5 22281169 22281369 -180804163 + L1MC/D LINE L1 5318 5521 -2287 482 348 44 45 chr5 22282309 22282883 -180802649 - HERVL LTR ERVL -381 5273 4701 255 319 35 18 chr5 22282997 22283110 -180802422 - HERVL LTR ERVL -1180 4584 4470 227 158 18 18 chr5 22284505 22284539 -180800993 + (TA)n Simple_repeat Simple_repeat 2 38 -20 1359 134 51 90 chr5 22284539 22284928 -180800604 + THE1C LTR MaLR 2 375 0 227 158 18 18 chr5 22284928 22284950 -180800582 + (TA)n Simple_repeat Simple_repeat 37 58 0 21 0 0 0 chr5 22285985 22286006 -180799526 + AT_rich Low_complexity Low_complexity 1 21 0 468 123 0 0 chr5 22286240 22286313 -180799219 + (TCCC)n Simple_repeat Simple_repeat 2 74 0 1356 223 24 7 chr5 22286313 22286600 -180798932 - AluJo SINE Alu -10 292 1 257 352 46 50 chr5 22287173 22287454 -180798078 + L2 LINE L2 2113 2392 -922 303 206 0 0 chr5 22287978 22288041 -180797491 - L1MC4 LINE L1 -1339 6703 6641 956 273 68 65 chr5 22288846 22289183 -180796349 + MLT1E LTR MaLR 48 388 -205 2237 113 3 0 chr5 22289183 22289483 -180796049 + AluSp SINE Alu 1 301 -12 956 273 68 65 chr5 22289483 22289529 -180796003 + MLT1E LTR MaLR 388 432 -161 417 94 0 0 chr5 22289529 22289593 -180795939 - L1P LINE L1 -3053 3093 3030 426 285 40 13 chr5 22289593 22289744 -180795788 + MLT1E LTR MaLR 430 584 -9 232 139 23 0 chr5 22289788 22289831 -180795701 - MER116 DNA Mariner 0 80 37 2523 51 0 10 chr5 22290005 22290316 -180795216 + AluY SINE Alu 2 309 -2 28 86 0 0 chr5 22290657 22290727 -180794805 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr5 22291689 22291710 -180793822 + AT_rich Low_complexity Low_complexity 1 21 0 317 125 18 0 chr5 22291759 22291815 -180793717 + GA-rich Low_complexity Low_complexity 3 59 0 21 36 0 0 chr5 22292025 22292053 -180793479 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 22292192 22292223 -180793309 + AT_rich Low_complexity Low_complexity 1 31 0 358 139 0 25 chr5 22292485 22292564 -180792968 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 227 191 15 0 chr5 22292951 22293019 -180792513 + (TA)n Simple_repeat Simple_repeat 1 69 0 238 146 18 18 chr5 22293019 22293074 -180792458 + GA-rich Low_complexity Low_complexity 1 55 0 231 178 0 22 chr5 22293152 22293197 -180792335 + LTR16B LTR ERVL 2 45 -419 2289 198 68 28 chr5 22293509 22293976 -180791556 + MLT2B1 LTR ERVL 1 448 -72 327 49 0 0 chr5 22293976 22294017 -180791515 + (TC)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr5 22294016 22294043 -180791489 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 2289 198 68 28 chr5 22294017 22294075 -180791457 + MLT2B1 LTR ERVL 448 520 0 573 341 97 40 chr5 22294875 22295424 -180790108 + HERV16 LTR ERVL 993 1572 -3424 1118 323 57 19 chr5 22295493 22296241 -180789291 + HERV16 LTR ERVL 1758 2515 -2481 10516 109 54 14 chr5 22296323 22298094 -180787438 - MER4-int LTR ERV1 -246 6352 4511 42952 33 21 1 chr5 22298096 22304127 -180781405 + L1PA2 LINE L1 2 6155 0 189 0 0 0 chr5 22304131 22304152 -180781380 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 3529 102 70 20 chr5 22304152 22304738 -180780794 - MER4-int LTR ERV1 -2072 4526 3912 2495 102 65 65 chr5 22304772 22305312 -180780220 - MER4-int LTR ERV1 -3321 3277 2738 1149 209 16 19 chr5 22305313 22305571 -180779961 + LTR8 LTR ERV1 1 257 -434 4036 81 62 21 chr5 22305571 22306236 -180779296 - MER4A-int LTR ERV1 -4103 2495 1804 1304 99 74 79 chr5 22306234 22306324 -180779208 - MER4A-int LTR ERV1 -4210 1268 1179 * 2584 64 0 0 chr5 22306324 22306635 -180778897 + AluY SINE Alu 1 311 0 1304 99 74 79 chr5 22306635 22306933 -180778599 - MER4A-int LTR ERV1 -4299 1179 510 2459 108 136 89 chr5 22306940 22307191 -180778341 - MER4A-int LTR ERV1 -6019 579 341 2111 52 88 0 chr5 22307191 22307463 -180778069 + AluY SINE Alu 1 296 -15 2459 108 136 89 chr5 22307463 22307764 -180777768 - MER4A-int LTR ERV1 -6257 341 1 1434 156 78 47 chr5 22307768 22308101 -180777431 - MER4A LTR ERV1 -1 663 262 255 111 22 22 chr5 22308101 22308146 -180777386 - MER4A LTR ERV1 -566 98 54 850 297 90 29 chr5 22308467 22308619 -180776913 + LTR16B LTR ERVL 1 142 -322 1242 218 84 30 chr5 22308619 22309046 -180776486 - LTR7 LTR ERV1 0 450 1 850 297 90 29 chr5 22309046 22309314 -180776218 + LTR16B LTR ERVL 142 447 -17 746 196 7 0 chr5 22309416 22309559 -180775973 - L1PB4 LINE L1 -7 6149 6006 1644 226 64 10 chr5 22310366 22310774 -180774758 - MER87 LTR ERV1 -2 539 110 397 226 130 35 chr5 22310792 22310907 -180774625 - MER87 LTR ERV1 -397 144 19 227 365 83 39 chr5 22310929 22311110 -180774422 - L2 LINE L2 -38 3234 3046 379 304 136 29 chr5 22312038 22312311 -180773221 + MLT1J2 LTR MaLR 25 312 -134 3110 186 36 3 chr5 22312334 22312920 -180772612 - LTR62 LTR ERVK -2 717 113 491 290 51 42 chr5 22314323 22314537 -180770995 + MER20 DNA MER1_type 3 218 -1 192 77 0 0 chr5 22315195 22315221 -180770311 + (T)n Simple_repeat Simple_repeat 1 26 0 2357 98 0 0 chr5 22315224 22315531 -180770001 - AluY SINE Alu -4 307 1 668 37 0 0 chr5 22315701 22315783 -180769749 + HERVL-A2 LTR ERVL 5573 5654 0 2931 109 24 31 chr5 22315783 22316234 -180769298 + MLT2A2 LTR ERVL 1 448 -5 469 310 46 6 chr5 22316422 22316596 -180768936 + MLT1L LTR MaLR 371 551 -64 181 352 38 0 chr5 22316649 22316754 -180768778 + MIR SINE MIR 154 262 0 221 204 19 0 chr5 22316768 22316822 -180768710 + (TTA)n Simple_repeat Simple_repeat 3 57 0 25 0 0 0 chr5 22316946 22316971 -180768561 + AT_rich Low_complexity Low_complexity 1 25 0 3139 207 75 20 chr5 22318462 22318936 -180766596 - L1MB3 LINE L1 0 6183 5736 1923 190 130 21 chr5 22318936 22319468 -180766064 + LTR49 LTR ERV1 2 591 -4 3139 207 75 20 chr5 22319468 22320235 -180765297 - L1MB3 LINE L1 -447 5736 4870 4822 140 41 32 chr5 22320235 22320506 -180765026 - MER4D LTR ERV1 0 903 636 1891 120 4 7 chr5 22320506 22320782 -180764750 - AluSx SINE Alu 0 312 38 4822 140 41 32 chr5 22320782 22321405 -180764127 - MER4D LTR ERV1 -267 636 1 3139 207 75 20 chr5 22321405 22321422 -180764110 - L1MB3 LINE L1 -1313 4870 4855 185 182 18 0 chr5 22321909 22321964 -180763568 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 22322065 22322089 -180763443 + AT_rich Low_complexity Low_complexity 1 24 0 2200 123 51 14 chr5 22323010 22323361 -180762171 + THE1B LTR MaLR 1 364 0 11304 102 6 3 chr5 22323361 22324917 -180760615 + THE1B-int LTR MaLR 1 1562 -18 2105 85 85 29 chr5 22324924 22325264 -180760268 + THE1B LTR MaLR 1 359 -5 510 147 42 14 chr5 22325430 22325573 -180759959 + GA-rich Low_complexity Low_complexity 1 147 0 2032 214 57 42 chr5 22326947 22327495 -180758037 + MER34B LTR ERV1 10 565 0 24 0 0 0 chr5 22327856 22327880 -180757652 + AT_rich Low_complexity Low_complexity 1 24 0 2474 60 0 10 chr5 22328503 22328802 -180756730 - AluY SINE Alu -11 300 5 1882 154 30 3 chr5 22331058 22331357 -180754175 + AluSx SINE Alu 1 307 -5 1690 141 96 37 chr5 22331445 22331799 -180753733 + THE1C LTR MaLR 1 375 0 230 224 0 17 chr5 22331818 22331876 -180753656 + L1MCa LINE L1 2006 2062 -4364 * 250 234 0 64 chr5 22331860 22331954 -180753578 - L1MC4 LINE L1 -1340 6702 6615 238 203 0 17 chr5 22331904 22331963 -180753569 + L1MCa LINE L1 2006 2063 -4363 * 183 205 0 0 chr5 22331964 22332003 -180753529 + (TA)n Simple_repeat Simple_repeat 2 40 0 227 174 0 0 chr5 22332003 22332049 -180753483 - LTR66 LTR ERVL -171 439 394 488 106 55 12 chr5 22332055 22332294 -180753238 + (TA)n Simple_repeat Simple_repeat 1 249 0 250 84 74 21 chr5 22332338 22332433 -180753099 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 34 0 0 0 chr5 22332534 22332568 -180752964 + AT_rich Low_complexity Low_complexity 1 34 0 645 93 22 44 chr5 22332568 22332751 -180752781 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 270 123 31 31 chr5 22332756 22332821 -180752711 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 560 152 51 0 chr5 22332822 22333126 -180752406 + (TA)n Simple_repeat Simple_repeat 1 319 0 228 214 0 0 chr5 22333266 22333308 -180752224 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 206 9 103 chr5 22333311 22333418 -180752114 - MLT1E LTR MaLR -7 586 490 1563 143 129 57 chr5 22334142 22334492 -180751040 + THE1C LTR MaLR 1 375 0 192 77 0 0 chr5 22334648 22334674 -180750858 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 244 208 38 0 chr5 22334803 22334856 -180750676 + CT-rich Low_complexity Low_complexity 2 56 0 641 387 88 27 chr5 22334864 22335492 -180750040 - HAL1 LINE L1 -1830 677 12 241 333 0 0 chr5 22335809 22335875 -180749657 - MIR SINE MIR -149 113 48 3417 137 29 19 chr5 22335884 22336554 -180748978 + MER50 LTR ERV1 3 711 -23 9817 160 31 11 chr5 22337001 22339964 -180745568 - L1MA1 LINE L1 0 6302 3272 1070 158 37 84 chr5 22340383 22340680 -180744852 + L1MA7 LINE L1 6007 6289 -2 22 0 0 0 chr5 22340680 22340702 -180744830 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 22341416 22341447 -180744085 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 22342327 22342356 -180743176 + AT_rich Low_complexity Low_complexity 1 29 0 1771 118 0 12 chr5 22342527 22342781 -180742751 - AluSx SINE Alu -25 287 37 456 35 0 0 chr5 22343981 22344039 -180741493 + (CA)n Simple_repeat Simple_repeat 2 59 0 347 279 78 0 chr5 22344340 22344469 -180741063 - MIR SINE MIR -3 259 121 674 302 62 19 chr5 22344727 22344830 -180740702 + MER45C DNA AcHobo 1 98 -855 2067 128 3 3 chr5 22344830 22345128 -180740404 - AluSc SINE Alu -11 298 1 674 302 62 19 chr5 22345128 22345282 -180740250 + MER45C DNA AcHobo 98 269 -684 486 328 0 0 chr5 22345332 22345454 -180740078 + MER45C DNA AcHobo 414 535 -418 4694 190 77 30 chr5 22346179 22346429 -180739103 + L1MA8 LINE L1 3989 4226 -2065 2579 65 0 0 chr5 22346429 22346739 -180738793 + AluY SINE Alu 1 310 -1 4694 190 77 30 chr5 22346739 22347314 -180738218 + L1MA8 LINE L1 4226 4772 -1519 655 134 53 53 chr5 22347314 22347501 -180738031 + L1MA7 LINE L1 6104 6290 -1 4694 190 77 30 chr5 22347501 22348147 -180737385 + L1MA8 LINE L1 4772 5386 -905 2547 40 0 7 chr5 22348147 22348449 -180737083 - AluY SINE Alu -11 300 1 4694 190 77 30 chr5 22348449 22349170 -180736362 + L1MA8 LINE L1 5386 6289 -2 186 103 0 0 chr5 22349262 22349291 -180736241 + (CA)n Simple_repeat Simple_repeat 2 30 0 402 285 146 106 chr5 22349297 22350216 -180735316 - L2 LINE L2 -901 2413 1458 1833 129 27 20 chr5 22350742 22351036 -180734496 - AluSq SINE Alu -9 304 9 524 345 35 16 chr5 22351111 22351427 -180734105 + LTR16C LTR ERVL 170 491 0 239 340 159 39 chr5 22351428 22351725 -180733807 - L2 LINE L2 -2323 991 731 2095 120 0 7 chr5 22351725 22352036 -180733496 + AluSx SINE Alu 2 310 0 239 340 159 39 chr5 22352036 22352278 -180733254 - L2 LINE L2 -2583 731 386 288 268 5 32 chr5 22352490 22352601 -180732931 + MIR SINE MIR 40 149 -65 989 274 72 93 chr5 22353431 22353500 -180732032 - MLT1E LTR MaLR -14 579 510 2302 94 7 0 chr5 22353500 22353808 -180731724 - AluSx SINE Alu -2 310 1 989 274 72 93 chr5 22353808 22354388 -180731144 - MLT1E LTR MaLR -83 510 9 1855 173 35 3 chr5 22354495 22354842 -180730690 - MER46B DNA MER2_type 0 236 4 355 325 96 37 chr5 22354884 22355002 -180730530 - L2 LINE L2 -164 3149 3015 1948 129 26 59 chr5 22355002 22355390 -180730142 - THE1C LTR MaLR 0 375 1 355 325 96 37 chr5 22355390 22355459 -180730073 - L2 LINE L2 -298 3015 2951 384 318 221 21 chr5 22355483 22355589 -180729943 - L2 LINE L2 -529 2785 2701 4631 30 4 4 chr5 22355589 22356147 -180729385 + LTR6B LTR ERV1 1 558 0 384 318 221 21 chr5 22356147 22356370 -180729162 - L2 LINE L2 -612 2702 2390 257 381 36 7 chr5 22356395 22356534 -180728998 - L2 LINE L2 -1167 2147 2005 182 279 47 100 chr5 22356582 22356657 -180728875 - L2 LINE L2 -2156 1158 1081 2190 111 0 16 chr5 22356657 22356972 -180728560 + AluSg SINE Alu 1 310 0 182 279 47 100 chr5 22356972 22357086 -180728446 - L2 LINE L2 -2233 1081 979 1292 168 50 0 chr5 22357086 22357324 -180728208 + MER31A LTR ERV1 1 250 -235 22 0 0 0 chr5 22357595 22357617 -180727915 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 22357676 22357704 -180727828 + AT_rich Low_complexity Low_complexity 1 28 0 4775 62 0 0 chr5 22357706 22358304 -180727228 + L1PA7 LINE L1 5557 6154 0 1375 179 57 24 chr5 22358334 22358631 -180726901 + AluSg SINE Alu 1 307 -3 2466 161 52 0 chr5 22359325 22359766 -180725766 - Tigger1 DNA MER2_type 0 2418 1955 2523 197 30 8 chr5 22359786 22360288 -180725244 - Tigger1 DNA MER2_type -1902 516 4 248 105 0 0 chr5 22360323 22360361 -180725171 - MLT2A2 LTR ERVL 0 453 416 225 178 0 0 chr5 22360379 22360424 -180725108 + L1MC4 LINE L1 6659 6703 -1339 2969 74 28 0 chr5 22360432 22360824 -180724708 - MLT2A1 LTR ERVL -40 404 2 30 0 0 0 chr5 22361148 22361178 -180724354 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 22361484 22361507 -180724025 + AT_rich Low_complexity Low_complexity 1 23 0 276 370 16 16 chr5 22362053 22362180 -180723352 + L2 LINE L2 2593 2719 -595 1869 119 10 31 chr5 22362180 22362474 -180723058 + AluSx SINE Alu 1 288 -24 182 128 26 0 chr5 22362476 22362515 -180723017 + G-rich Low_complexity Low_complexity 2 41 0 325 292 99 55 chr5 22362515 22362717 -180722815 + L2 LINE L2 2703 2913 -401 385 291 38 87 chr5 22362731 22363020 -180722512 + L2 LINE L2 3021 3295 -18 2308 87 3 0 chr5 22364724 22365023 -180720509 - AluY SINE Alu -11 300 1 707 270 25 94 chr5 22365228 22365621 -180719911 - Charlie6 DNA MER1_type -12 3488 3123 215 122 0 24 chr5 22365623 22365664 -180719868 + (TA)n Simple_repeat Simple_repeat 2 41 0 333 152 10 101 chr5 22365664 22365763 -180719769 - L1MC4 LINE L1 -1339 6703 6614 1026 157 15 46 chr5 22365805 22366002 -180719530 - AluSg/x SINE Alu -27 285 95 225 198 70 23 chr5 22366197 22366283 -180719249 - L1MC4 LINE L1 -1339 6703 6614 1546 188 3 31 chr5 22366312 22366605 -180718927 - AluSx SINE Alu -27 285 1 1478 255 20 70 chr5 22366746 22367447 -180718085 + L1ME LINE L1 82 747 -5323 3182 243 35 23 chr5 22367471 22368412 -180717120 - Charlie6 DNA MER1_type -1248 2252 1301 912 214 52 128 chr5 22368419 22368812 -180716720 + MLT1A2 LTR MaLR 11 456 -1 2319 279 105 35 chr5 22368833 22369900 -180715632 - Charlie6 DNA MER1_type -2229 1271 130 2060 115 3 0 chr5 22370449 22370737 -180714795 + AluSx SINE Alu 1 289 -23 1443 172 42 103 chr5 22370834 22371202 -180714330 - MLT1D LTR MaLR 0 505 161 2173 146 33 28 chr5 22371202 22371592 -180713940 + Tigger2a DNA MER2_type 1 392 -42 450 213 13 97 chr5 22371651 22371806 -180713726 - MLT1D LTR MaLR -363 142 1 280 301 21 14 chr5 22372111 22372254 -180713278 + (TA)n Simple_repeat Simple_repeat 2 145 0 231 200 0 0 chr5 22372257 22372307 -180713225 - L1MC4 LINE L1 -1340 6702 6653 1385 269 0 3 chr5 22372374 22372686 -180712846 - MER82 DNA MER2_type -34 619 309 4692 193 34 6 chr5 22372686 22373562 -180711970 + MER54A LTR ERVL 1 901 0 1224 199 46 42 chr5 22373566 22373698 -180711834 - MER82 DNA MER2_type -344 309 179 4098 88 52 5 chr5 22373698 22374279 -180711253 - LTR14B LTR ERVK 0 608 1 1224 199 46 42 chr5 22374279 22374453 -180711079 - MER82 DNA MER2_type -474 179 2 351 0 0 0 chr5 22374508 22374547 -180710985 + (TA)n Simple_repeat Simple_repeat 1 39 0 2323 100 6 0 chr5 22374783 22375094 -180710438 + AluSp SINE Alu 1 313 0 2111 125 3 0 chr5 22375500 22375805 -180709727 - AluSx SINE Alu -6 306 1 22 0 0 0 chr5 22378175 22378197 -180707335 + AT_rich Low_complexity Low_complexity 1 22 0 2373 43 0 0 chr5 22380358 22380662 -180704870 + AluY SINE Alu 1 304 0 373 307 98 7 chr5 22380693 22380846 -180704686 - MIR SINE MIR -64 198 32 269 212 131 10 chr5 22381423 22381522 -180704010 - MIR SINE MIR -74 188 78 315 213 25 0 chr5 22382925 22383005 -180702527 - L1M4c LINE L1 -4198 2186 2105 675 197 120 0 chr5 22383015 22383157 -180702375 - FRAM SINE Alu -19 157 1 1044 243 12 52 chr5 22383166 22383629 -180701903 - L1M4c LINE L1 -4285 2099 1560 312 27 0 0 chr5 22383629 22383666 -180701866 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 263 0 0 chr5 22383682 22383739 -180701793 - L1MEc LINE L1 -3961 2254 2198 425 35 0 0 chr5 22384692 22384750 -180700782 + L1PB1 LINE L1 6094 6151 0 24 67 0 0 chr5 22385126 22385171 -180700361 + AT_rich Low_complexity Low_complexity 1 45 0 622 232 16 0 chr5 22385818 22385943 -180699589 + FRAM SINE Alu 5 131 -45 423 56 0 0 chr5 22385945 22385999 -180699533 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 2144 110 0 3 chr5 22389071 22389362 -180696170 - AluSx SINE Alu -22 290 1 205 268 189 37 chr5 22389520 22389684 -180695848 + L2 LINE L2 3124 3312 -1 23 33 0 0 chr5 22390020 22390050 -180695482 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 22390130 22390166 -180695366 + AT_rich Low_complexity Low_complexity 1 36 0 260 312 21 11 chr5 22390199 22390292 -180695240 - MER76 LTR ERV -402 286 193 551 264 46 23 chr5 22390340 22390514 -180695018 - MER76 LTR ERV -509 179 2 1008 298 156 42 chr5 22390668 22390769 -180694763 - L1MEc LINE L1 -5480 916 828 3804 130 15 40 chr5 22390769 22391492 -180694040 - L1MA4 LINE L1 -3 6297 5593 1008 298 156 42 chr5 22391492 22392178 -180693354 - L1MEc LINE L1 -5568 828 39 22 56 0 0 chr5 22393396 22393432 -180692100 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 22393630 22393659 -180691873 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 22394006 22394194 -180691338 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 22394379 22394552 -180690980 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 22394629 22394657 -180690875 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 22394657 22395241 -180690291 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 22395241 22395266 -180690266 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 22395266 22396174 -180689358 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 22396847 22396907 -180688625 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 22396922 22397054 -180688478 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 22397651 22397782 -180687750 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 22398232 22398262 -180687270 + AT_rich Low_complexity Low_complexity 1 30 0 40640 44 39 1 chr5 22398821 22404748 -180680784 + L1HS LINE L1 2 6155 0 22 56 0 0 chr5 22405543 22405579 -180679953 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 22405777 22405806 -180679726 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 22406153 22406341 -180679191 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 22406526 22406699 -180678833 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 22406776 22406804 -180678728 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 22406804 22407388 -180678144 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 22407388 22407413 -180678119 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 22407413 22408321 -180677211 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 22408994 22409054 -180676478 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 22409069 22409201 -180676331 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 22409798 22409929 -180675603 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 22410379 22410409 -180675123 + AT_rich Low_complexity Low_complexity 1 30 0 207 234 0 0 chr5 22411368 22411445 -180674087 + CT-rich Low_complexity Low_complexity 2 78 0 390 294 22 50 chr5 22412145 22412325 -180673207 + L1MC4 LINE L1 6458 6632 -1410 598 219 63 85 chr5 22412334 22412404 -180673128 + L1MC4 LINE L1 6860 6930 -961 215 30 0 30 chr5 22412404 22412437 -180673095 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 598 219 63 85 chr5 22412437 22412758 -180672774 + L1MC4 LINE L1 6930 7395 -496 2171 91 0 14 chr5 22413401 22413697 -180671835 + AluSp SINE Alu 1 292 -21 33 56 0 0 chr5 22413939 22413993 -180671539 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr5 22414250 22414278 -180671254 + AT_rich Low_complexity Low_complexity 1 28 0 237 316 105 13 chr5 22414700 22414852 -180670680 - L2 LINE L2 -1232 2082 1917 25 0 0 0 chr5 22414873 22414898 -180670634 + AT_rich Low_complexity Low_complexity 1 25 0 187 387 0 0 chr5 22415056 22415118 -180670414 + MIR SINE MIR 65 126 -136 21 36 0 0 chr5 22416965 22416993 -180668539 + AT_rich Low_complexity Low_complexity 1 28 0 2082 117 30 0 chr5 22417099 22417399 -180668133 + AluSc SINE Alu 1 309 0 288 182 0 0 chr5 22418742 22418797 -180666735 - MLT1E2 LTR MaLR -1 625 571 1561 274 30 62 chr5 22419741 22420350 -180665182 + MLT1E LTR MaLR 5 593 0 665 281 36 5 chr5 22420614 22420810 -180664722 - MER20 DNA MER1_type -17 202 1 37 23 0 0 chr5 22421112 22421156 -180664376 + AT_rich Low_complexity Low_complexity 1 44 0 443 331 43 46 chr5 22421269 22421619 -180663913 + ERVL LTR ERVL 3806 4154 -1610 2365 134 3 6 chr5 22421635 22422000 -180663532 - THE1B LTR MaLR 0 364 1 1161 183 58 6 chr5 22422224 22422659 -180662873 - LTR54 LTR ERV1 0 510 1 2265 213 104 19 chr5 22422824 22423398 -180662134 + MER67B LTR ERV1 39 661 0 771 172 161 33 chr5 22423827 22424209 -180661323 - LTR54B LTR ERV1 -37 461 1 338 254 113 54 chr5 22424397 22424582 -180660950 + LTR33A LTR ERVL 321 516 -7 684 226 0 0 chr5 22424613 22424737 -180660795 + FLAM_A SINE Alu 2 125 -8 296 232 14 14 chr5 22424769 22424907 -180660625 + (TA)n Simple_repeat Simple_repeat 2 139 0 200 197 0 33 chr5 22425565 22425626 -180659906 + (TATATG)n Simple_repeat Simple_repeat 6 64 0 323 325 98 31 chr5 22425931 22426217 -180659315 - L1MC4 LINE L1 -25 8017 7713 630 65 37 19 chr5 22426287 22426395 -180659137 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 962 260 82 11 chr5 22426399 22426680 -180658852 - AluJb SINE Alu -1 301 1 643 289 12 6 chr5 22426681 22426847 -180658685 - MER110 LTR ERV1 -264 227 61 345 78 182 39 chr5 22427805 22427882 -180657650 + MSTB LTR MaLR 1 88 -338 319 304 112 0 chr5 22427882 22428043 -180657489 - MER69 DNA AcHobo -854 372 194 767 271 102 24 chr5 22428111 22428681 -180656851 + L1MC2 LINE L1 3445 4169 -1977 * 31503 109 11 36 chr5 22428677 22434754 -180650778 + L1PA7 LINE L1 223 6467 -2 666 257 53 5 chr5 22434922 22435128 -180650404 + L1MC2 LINE L1 4733 4948 -1198 4924 183 41 43 chr5 22435246 22436153 -180649379 + L1MC2 LINE L1 4925 5832 -512 1662 193 6 3 chr5 22436153 22436464 -180649068 + AluJb SINE Alu 1 312 0 4924 183 41 43 chr5 22436464 22436485 -180649047 + L1MC2 LINE L1 5832 5852 -492 2305 117 0 0 chr5 22436485 22436794 -180648738 + AluSg SINE Alu 1 309 -1 195 42 0 0 chr5 22436799 22436823 -180648709 + (GA)n Simple_repeat Simple_repeat 1 24 0 4924 183 41 43 chr5 22436823 22437311 -180648221 + L1MC2 LINE L1 5856 6344 0 189 242 121 15 chr5 22438260 22438326 -180647206 + MIR SINE MIR 170 242 -20 195 42 0 0 chr5 22440111 22440135 -180645397 + (TG)n Simple_repeat Simple_repeat 2 25 0 211 234 21 0 chr5 22440149 22440196 -180645336 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 225 0 0 0 chr5 22440202 22440227 -180645305 + (TG)n Simple_repeat Simple_repeat 2 26 0 2200 119 0 13 chr5 22441733 22442045 -180643487 - AluSc SINE Alu 0 309 2 378 283 14 86 chr5 22442325 22442604 -180642928 + MLT1L LTR MaLR 46 304 -311 282 310 39 8 chr5 22442716 22442845 -180642687 + MLT1L LTR MaLR 470 602 -13 243 406 0 10 chr5 22443871 22443972 -180641560 + L2 LINE L2 3173 3272 0 234 328 35 52 chr5 22444323 22444439 -180641093 - MER5B DNA MER1_type -63 115 2 254 307 92 31 chr5 22444862 22445025 -180640507 + MIR SINE MIR 88 260 -2 200 297 0 77 chr5 22445290 22445381 -180640151 - L2 LINE L2 0 3313 3230 213 164 36 55 chr5 22445832 22445887 -180639645 - L2 LINE L2 -670 2644 2591 1155 247 29 47 chr5 22446036 22446376 -180639156 + MLT1B LTR MaLR 5 338 -52 1890 127 3 41 chr5 22446942 22447270 -180638262 + AluSx SINE Alu 1 317 0 2024 187 16 28 chr5 22447547 22448000 -180637532 + MSTB LTR MaLR 6 425 -1 8290 208 15 7 chr5 22448002 22449638 -180635894 + MSTB-int LTR MaLR 2 1651 0 2480 160 12 14 chr5 22449638 22450063 -180635469 + MSTB LTR MaLR 1 424 -2 206 385 66 0 chr5 22450238 22450360 -180635172 + MIR SINE MIR 54 183 -79 438 20 0 0 chr5 22450423 22450474 -180635058 + (CA)n Simple_repeat Simple_repeat 2 52 0 2884 141 42 4 chr5 22451280 22451775 -180633757 - MER75 DNA T2_type 0 514 1 1448 220 43 12 chr5 22451844 22452171 -180633361 + MER1B DNA MER1_type 1 337 0 24 32 0 0 chr5 22452297 22452328 -180633204 + AT_rich Low_complexity Low_complexity 1 31 0 24 67 0 0 chr5 22452716 22452761 -180632771 + AT_rich Low_complexity Low_complexity 1 45 0 3071 94 4 58 chr5 22452970 22453322 -180632210 - L1MA2 LINE L1 0 6304 5989 2304 96 0 0 chr5 22453322 22453613 -180631919 - AluSg SINE Alu -9 301 11 3071 94 4 58 chr5 22453613 22453793 -180631739 - L1MA2 LINE L1 -315 5989 5801 1791 174 22 17 chr5 22453969 22454331 -180631201 - L1 LINE L1 -1372 4774 4411 2038 113 6 41 chr5 22454331 22454519 -180631013 - AluSq SINE Alu -6 307 133 5305 153 30 45 chr5 22454519 22455605 -180629927 + MER11C LTR ERVK 1 1070 -1 2038 113 6 41 chr5 22455605 22455734 -180629798 - AluSq SINE Alu -180 133 1 385 71 29 0 chr5 22455748 22455818 -180629714 + L1MA7 LINE L1 6220 6291 0 1781 188 16 24 chr5 22456147 22456530 -180629002 + MLT1B LTR MaLR 3 382 -8 639 228 49 38 chr5 22456651 22456835 -180628697 + MER5A DNA MER1_type 4 189 0 255 264 107 41 chr5 22457001 22457122 -180628410 - Charlie8 DNA MER1_type -2273 144 16 2021 136 0 0 chr5 22457259 22457570 -180627962 + AluSg SINE Alu 1 311 0 2340 89 0 10 chr5 22460549 22460862 -180624670 + AluSx SINE Alu 1 310 -2 874 287 15 42 chr5 22461766 22462101 -180623431 + MLT2C1 LTR ERVL 13 338 -59 1548 237 62 21 chr5 22462247 22462715 -180622817 - MLT1D LTR MaLR -18 487 1 29 0 0 0 chr5 22462846 22462875 -180622657 + AT_rich Low_complexity Low_complexity 1 29 0 1454 234 33 9 chr5 22463299 22463628 -180621904 - MLT1A1 LTR MaLR -28 337 1 1387 164 194 10 chr5 22464580 22464873 -180620659 - MER47A DNA MER2_type 0 366 20 1050 33 8 0 chr5 22465209 22465331 -180620201 + AluY SINE Alu 1 123 -188 556 201 49 10 chr5 22465435 22465639 -180619893 + AluY SINE Alu 89 300 -11 1484 185 34 27 chr5 22465921 22466213 -180619319 - AluSx SINE Alu -18 294 1 21 57 0 0 chr5 22466219 22466254 -180619278 + AT_rich Low_complexity Low_complexity 1 35 0 1958 117 0 0 chr5 22466666 22466939 -180618593 - AluSg SINE Alu -37 273 1 326 304 31 62 chr5 22467101 22467262 -180618270 - L2 LINE L2 0 3313 3158 252 301 22 44 chr5 22467439 22467575 -180617957 + L2 LINE L2 3009 3141 -172 419 233 50 76 chr5 22469175 22469347 -180616185 + MLT1E2 LTR MaLR 82 260 -264 409 215 47 56 chr5 22469398 22469505 -180616027 + MLT1E2 LTR MaLR 391 496 -130 234 91 0 0 chr5 22469528 22469561 -180615971 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 4559 204 8 70 chr5 22469561 22470770 -180614762 + L1P LINE L1 2466 3599 -2547 21 36 0 0 chr5 22470894 22470922 -180614610 + AT_rich Low_complexity Low_complexity 1 28 0 865 229 61 109 chr5 22473108 22473349 -180612183 - MER67C LTR ERV1 -4 706 455 2132 96 10 3 chr5 22473349 22473652 -180611880 - AluY SINE Alu -6 305 1 1470 186 0 41 chr5 22473662 22473957 -180611575 - AluJo SINE Alu -22 290 8 865 229 61 109 chr5 22473957 22474325 -180611207 - MER67C LTR ERV1 -264 446 116 546 274 68 32 chr5 22474448 22474828 -180610704 - Charlie2 DNA MER1_type -1 2861 2468 820 205 10 10 chr5 22474976 22475171 -180610361 - Charlie2 DNA MER1_type -636 2226 2032 275 257 29 29 chr5 22475204 22475255 -180610277 - Charlie2 DNA MER1_type -897 1965 1915 216 0 0 0 chr5 22475255 22475279 -180610253 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 275 257 29 29 chr5 22475279 22475332 -180610200 - Charlie2 DNA MER1_type -946 1916 1861 444 273 122 63 chr5 22475347 22475633 -180609899 - Charlie2 DNA MER1_type -2465 317 15 1855 151 6 39 chr5 22475840 22476151 -180609381 - AluSx SINE Alu -11 301 1 1052 178 17 0 chr5 22476216 22476390 -180609142 + AluJb SINE Alu 117 293 -19 1668 204 14 19 chr5 22478059 22478426 -180607106 - MER89 LTR ERV1 0 559 195 264 183 11 86 chr5 22478398 22478491 -180607041 - MER89 LTR ERV1 -473 86 1 * 226 309 22 43 chr5 22479062 22479201 -180606331 + MLT1I LTR MaLR 11 146 -263 2154 126 0 0 chr5 22479447 22479740 -180605792 - AluSg SINE Alu -17 293 1 342 0 0 0 chr5 22481095 22481133 -180604399 + (TG)n Simple_repeat Simple_repeat 1 38 0 517 272 82 31 chr5 22482350 22482545 -180602987 - MLT1J2 LTR MaLR -6 444 240 1480 212 0 0 chr5 22483200 22483459 -180602073 + AluSq SINE Alu 1 259 -54 5488 57 48 8 chr5 22484633 22485368 -180600164 + L1PA6 LINE L1 5390 6153 -1 659 165 38 8 chr5 22486081 22486214 -180599318 - LTR3b LTR ERVK -47 453 317 4630 159 31 43 chr5 22486214 22487564 -180597968 - HERVK3 LTR ERVK -384 5561 1321 427 255 0 31 chr5 22487552 22487650 -180597882 - HERVK3 LTR ERVK -6563 680 586 * 641 241 89 15 chr5 22487706 22487909 -180597623 - HERVK3 LTR ERVK -6971 272 55 265 127 254 0 chr5 22487973 22488028 -180597504 - HERVK3 LTR ERVK -7025 218 150 219 182 36 0 chr5 22488121 22488176 -180597356 + (CTACT)n Simple_repeat Simple_repeat 4 60 0 562 230 179 63 chr5 22488564 22488899 -180596633 - MLT1A2 LTR MaLR 0 374 1 219 170 0 0 chr5 22491814 22491861 -180593671 + (TA)n Simple_repeat Simple_repeat 2 48 0 30 0 0 0 chr5 22492631 22492661 -180592871 + AT_rich Low_complexity Low_complexity 1 30 0 228 35 0 0 chr5 22493174 22493203 -180592329 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 82 0 0 chr5 22493674 22493723 -180591809 + AT_rich Low_complexity Low_complexity 1 49 0 1209 229 10 10 chr5 22493852 22494140 -180591392 + AluJo SINE Alu 1 288 -24 430 277 111 65 chr5 22494464 22494789 -180590743 + L1ME1 LINE L1 1093 1432 -4994 509 209 0 9 chr5 22494878 22494988 -180590544 + L1ME1 LINE L1 4388 4496 -1930 22 0 0 0 chr5 22495067 22495089 -180590443 + AT_rich Low_complexity Low_complexity 1 22 0 1645 181 64 61 chr5 22495185 22495392 -180590140 - LTR57 LTR ERVL 0 411 201 2573 48 0 0 chr5 22495392 22495702 -180589830 - AluY SINE Alu -1 310 1 1645 181 64 61 chr5 22495702 22495903 -180589629 - LTR57 LTR ERVL -210 201 2 276 257 89 46 chr5 22496015 22496252 -180589280 + L1ME1 LINE L1 4737 4983 -1443 216 130 0 43 chr5 22496267 22496313 -180589219 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 954 291 64 15 chr5 22496351 22496743 -180588789 + L1ME1 LINE L1 6031 6441 -5 2165 102 0 10 chr5 22497062 22497375 -180588157 - AluSg SINE Alu 0 310 1 23 33 0 0 chr5 22497480 22497510 -180588022 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 22497692 22497735 -180587797 + AT_rich Low_complexity Low_complexity 1 43 0 216 265 231 34 chr5 22499045 22499162 -180586370 + MER5B DNA MER1_type 4 143 -35 2328 60 0 0 chr5 22499249 22499551 -180585981 - L1PA5 LINE L1 0 6154 5853 2162 38 0 4 chr5 22499551 22499814 -180585718 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 22499820 22499842 -180585690 + AT_rich Low_complexity Low_complexity 1 22 0 205 171 0 0 chr5 22500063 22500098 -180585434 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 937 308 68 16 chr5 22500178 22500604 -180584928 + MLT1J LTR MaLR 4 451 -60 202 258 15 45 chr5 22500606 22500672 -180584860 + MER5B DNA MER1_type 3 66 -112 1953 137 7 0 chr5 22501173 22501465 -180584067 - AluSx SINE Alu -18 294 1 30 93 0 0 chr5 22501545 22501631 -180583901 + AT_rich Low_complexity Low_complexity 1 86 0 1096 253 133 41 chr5 22503032 22503550 -180581982 - MLT1F1 LTR MaLR -2 565 3 213 318 73 9 chr5 22503603 22503713 -180581819 + L2 LINE L2 854 970 -2344 333 279 152 44 chr5 22503766 22503924 -180581608 + MER5B DNA MER1_type 1 175 -3 804 240 55 10 chr5 22503982 22504182 -180581350 + MER58A DNA MER1_type 4 212 -12 267 31 0 0 chr5 22504220 22504252 -180581280 + (TC)n Simple_repeat Simple_repeat 1 32 0 266 297 52 58 chr5 22504912 22505067 -180580465 - HAL1 LINE L1 -2043 464 311 666 193 183 67 chr5 22505172 22505565 -180579967 - MER31B LTR ERV1 0 514 1 1796 179 105 10 chr5 22505635 22506026 -180579506 - MSTA LTR MaLR 0 428 1 1901 150 29 42 chr5 22506058 22506438 -180579094 + THE1C LTR MaLR 1 375 0 213 226 0 0 chr5 22506514 22506567 -180578965 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 599 244 93 39 chr5 22506762 22507020 -180578512 - MER20B DNA MER1_type -278 505 234 2215 115 3 0 chr5 22507733 22508045 -180577487 - AluSp SINE Alu 0 313 1 729 256 112 48 chr5 22508105 22508397 -180577135 + MER65A LTR ERV1 1 330 -115 2052 131 150 5 chr5 22508397 22508771 -180576761 + MSTA LTR MaLR 1 428 0 729 256 112 48 chr5 22508771 22508896 -180576636 + MER65A LTR ERV1 330 445 0 448 230 0 0 chr5 22509163 22509263 -180576269 + LTR23-int LTR ERV1 891 990 -4133 304 204 186 9 chr5 22509265 22509378 -180576154 + MER34C LTR ERV1 160 292 -293 862 246 83 102 chr5 22509430 22510871 -180574661 + LTR23-int LTR ERV1 1161 2573 -2550 384 236 18 9 chr5 22510869 22510979 -180574553 + LTR23-int LTR ERV1 2481 2591 -2345 * 1773 282 45 53 chr5 22510986 22511738 -180573794 + L1PA12 LINE L1 2 747 -6834 5679 111 31 9 chr5 22511740 22512612 -180572920 + L1PA15 LINE L1 5275 6165 0 1315 161 113 127 chr5 22512672 22513231 -180572301 + LTR23-int LTR ERV1 4026 4576 -1755 417 226 57 0 chr5 22614354 22614460 -180471072 - MIR SINE MIR -120 142 31 2629 51 0 3 chr5 22615505 22615817 -180469715 - AluY SINE Alu 0 311 1 9271 69 5 15 chr5 22616443 22617259 -180468273 - L1PA3 LINE L1 0 6155 5333 2210 101 7 0 chr5 22617259 22617546 -180467986 - AluSx SINE Alu -17 295 7 9271 69 5 15 chr5 22617546 22618754 -180466778 - L1P1 LINE L1 -822 5333 4126 1981 21 0 0 chr5 22618754 22618988 -180466544 + L1P1 LINE L1 5350 5583 -572 1886 88 0 0 chr5 22619091 22619331 -180466201 + AluSq SINE Alu 74 313 0 1987 106 67 0 chr5 22620838 22621121 -180464411 - AluSg1 SINE Alu -7 302 1 789 163 75 0 chr5 22621232 22621379 -180464153 - AluSg/x SINE Alu -13 296 139 300 306 61 66 chr5 22621845 22622041 -180463491 + LTR33 LTR ERVL 304 498 -23 24 67 0 0 chr5 22622069 22622114 -180463418 + AT_rich Low_complexity Low_complexity 1 45 0 2016 143 62 11 chr5 22622168 22622525 -180463007 + THE1C LTR MaLR 1 375 0 8446 138 22 43 chr5 22622562 22623391 -180462141 + THE1C-int LTR MaLR 59 845 -735 2339 76 7 7 chr5 22623391 22623693 -180461839 + AluY SINE Alu 1 302 -9 8446 138 22 43 chr5 22623693 22624295 -180461237 + THE1C-int LTR MaLR 845 1459 -121 1128 139 19 48 chr5 22624300 22624509 -180461023 + THE1C LTR MaLR 173 375 0 191 348 22 22 chr5 22624958 22625050 -180460482 - L2 LINE L2 0 3272 3181 279 262 131 0 chr5 22625199 22625283 -180460249 - MER3 DNA MER1_type -114 95 1 763 268 68 19 chr5 22625332 22625597 -180459935 - LTR16C LTR ERVL -71 420 143 475 222 81 45 chr5 22625740 22625938 -180459594 - MER3 DNA MER1_type 0 209 5 21 0 0 0 chr5 22627030 22627051 -180458481 + AT_rich Low_complexity Low_complexity 1 21 0 6158 160 25 0 chr5 22627550 22628617 -180456915 - Tigger1 DNA MER2_type 0 2418 1325 257 242 0 0 chr5 22628621 22628687 -180456845 + (TA)n Simple_repeat Simple_repeat 2 67 0 7183 158 20 3 chr5 22628864 22630075 -180455457 - Tigger1 DNA MER2_type -1187 1231 1 1997 247 36 0 chr5 22630097 22630518 -180455014 + MER70A LTR ERVL 1 436 -36 264 115 213 16 chr5 22630523 22630584 -180454948 + MER70A LTR ERVL 400 472 0 2554 59 0 3 chr5 22630654 22630961 -180454571 - AluY SINE Alu -5 306 1 269 188 0 31 chr5 22631417 22631481 -180454051 + L1MB8 LINE L1 6108 6169 -9 382 224 82 34 chr5 22631957 22632104 -180453428 - L2 LINE L2 -2429 885 732 22 56 0 0 chr5 22632964 22633000 -180452532 + AT_rich Low_complexity Low_complexity 1 36 0 1012 98 0 0 chr5 22633117 22633249 -180452283 + AluY SINE Alu 1 132 -179 531 335 58 29 chr5 22634055 22634330 -180451202 + MLT1J LTR MaLR 5 287 -224 360 337 87 17 chr5 22635317 22635489 -180450043 - MER5A DNA MER1_type 0 189 6 322 320 81 6 chr5 22635897 22636069 -180449463 - MER5A DNA MER1_type -1 188 4 762 157 101 6 chr5 22636087 22636246 -180449286 - MLT1D LTR MaLR -192 313 140 2526 231 26 10 chr5 22636252 22636948 -180448584 + L1ME1 LINE L1 5304 5944 -222 301 316 38 30 chr5 22637022 22637155 -180448377 + L1MB7 LINE L1 6036 6169 -15 1303 238 134 47 chr5 22638214 22638722 -180446810 + MLT1E3 LTR MaLR 72 623 -1 2198 116 0 0 chr5 22639926 22640228 -180445304 + AluSg1 SINE Alu 1 302 -7 197 343 57 0 chr5 22640546 22640616 -180444916 + MER5B DNA MER1_type 1 74 -104 250 269 103 0 chr5 22640957 22641035 -180444497 + MIR SINE MIR 119 204 -58 29 47 0 0 chr5 22641178 22641221 -180444311 + AT_rich Low_complexity Low_complexity 1 43 0 6961 112 7 16 chr5 22642196 22643222 -180442310 + L1PA10 LINE L1 4305 5322 -824 2181 101 7 0 chr5 22643222 22643509 -180442023 + AluSx SINE Alu 7 295 -17 6961 112 7 16 chr5 22643509 22643575 -180441957 + L1PA10 LINE L1 5322 5387 -759 4802 113 10 10 chr5 22643675 22644402 -180441130 + L1PA10 LINE L1 5424 6150 -18 216 380 43 11 chr5 22644806 22644898 -180440634 - MIR SINE MIR -166 96 2 204 209 0 0 chr5 22645515 22645558 -180439974 + L2 LINE L2 3263 3305 -8 2265 151 8 16 chr5 22647113 22647491 -180438041 + THE1C LTR MaLR 1 375 0 225 178 0 0 chr5 22648252 22648297 -180437235 + (TA)n Simple_repeat Simple_repeat 2 46 0 25 0 0 0 chr5 22649915 22649940 -180435592 + AT_rich Low_complexity Low_complexity 1 25 0 381 339 37 37 chr5 22650186 22650375 -180435157 - MER5A DNA MER1_type 0 189 1 253 108 0 0 chr5 22650511 22650548 -180434984 + Tigger3(Golem) DNA MER2_type 2935 2971 -58 1071 127 20 241 chr5 22650554 22650674 -180434858 - Tigger3b DNA MER2_type -1798 1231 1086 2682 68 8 0 chr5 22650674 22651026 -180434506 - THE1A LTR MaLR 0 355 1 1071 127 20 241 chr5 22651026 22651308 -180434224 - Tigger3b DNA MER2_type -1943 1086 918 2196 165 26 29 chr5 22651310 22651728 -180433804 - MSTB LTR MaLR -9 417 1 * 4548 148 72 12 chr5 22651728 22652603 -180432929 - Tigger3b DNA MER2_type -304 927 1 348 214 162 26 chr5 22652604 22652758 -180432774 + L1ME1 LINE L1 4377 4551 -1595 1052 153 61 57 chr5 22652829 22652884 -180432648 - L1MA9 LINE L1 0 6312 6259 3475 216 30 49 chr5 22652884 22653760 -180431772 - MER21B LTR ERV1 -4 859 1 1052 153 61 57 chr5 22653760 22653932 -180431600 - L1MA9 LINE L1 -53 6259 6084 230 200 31 0 chr5 22653944 22654009 -180431523 + L1ME1 LINE L1 4538 4604 -1542 1641 244 45 62 chr5 22654036 22654586 -180430946 + MER77 LTR ERV1 56 596 -9 1313 252 89 21 chr5 22654593 22655021 -180430511 + MLT1C LTR MaLR 9 465 -2 1306 273 73 58 chr5 22655053 22655394 -180430138 + L1ME1 LINE L1 4616 4950 -1216 2040 135 0 3 chr5 22655394 22655690 -180429842 - AluSg SINE Alu -15 295 1 1306 273 73 58 chr5 22655690 22656859 -180428673 + L1ME1 LINE L1 4950 6161 -5 261 128 0 0 chr5 22657538 22657585 -180427947 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 853 160 0 0 chr5 22657716 22657860 -180427672 + Tigger2 DNA MER2_type 2468 2611 -107 2286 97 7 0 chr5 22658036 22658334 -180427198 + AluSc SINE Alu 1 300 -9 280 393 34 15 chr5 22658557 22658822 -180426710 + HERVL LTR ERVL 1379 1648 -4116 532 294 184 21 chr5 22658894 22659176 -180426356 + MLT1G1 LTR MaLR 268 595 0 374 369 29 35 chr5 22659556 22659903 -180425629 + HERVL LTR ERVL 3588 3932 -1722 4154 262 33 39 chr5 22660023 22660076 -180425456 + L1M4 LINE L1 114 166 -6376 1875 160 10 0 chr5 22660076 22660383 -180425149 + AluSx SINE Alu 1 310 -2 4154 262 33 39 chr5 22660383 22661778 -180423754 + L1M4 LINE L1 166 1554 -4988 1669 249 33 22 chr5 22661788 22662428 -180423104 + L1M4 LINE L1 1604 2393 -4432 1482 222 15 3 chr5 22662582 22662916 -180422616 + L1M4 LINE L1 5901 6238 -444 1037 218 30 106 chr5 22662989 22663384 -180422148 + MLT1A1 LTR MaLR 1 365 0 1043 103 0 0 chr5 22663390 22663536 -180421996 + AluSg/x SINE Alu 165 310 -2 434 169 56 0 chr5 22663616 22663713 -180421819 - L1MA9 LINE L1 -9 6282 6176 1559 158 1 110 chr5 22663750 22664176 -180421356 - L1MA9 LINE L1 -726 5586 5203 1692 150 21 67 chr5 22664535 22664862 -180420670 + AluJb SINE Alu 1 312 0 1665 225 49 33 chr5 22666485 22666974 -180418558 - MLT1D LTR MaLR -4 501 5 2068 126 0 13 chr5 22667316 22667633 -180417899 + AluSq SINE Alu 1 313 0 327 213 0 0 chr5 22667638 22667713 -180417819 + GA-rich Low_complexity Low_complexity 3 77 0 22 0 0 0 chr5 22668465 22668487 -180417045 + AT_rich Low_complexity Low_complexity 1 22 0 565 146 0 4 chr5 22668555 22668774 -180416758 + AluSx SINE Alu 1 296 -13 731 280 56 47 chr5 22669075 22669414 -180416118 - LTR16A1 LTR ERVL -60 397 56 358 164 0 0 chr5 22669895 22669950 -180415582 + AluSg/x SINE Alu 210 264 -38 1008 347 53 34 chr5 22670303 22670871 -180414661 - HERV16 LTR ERVL -2640 2356 1778 1487 195 48 7 chr5 22671314 22671606 -180413926 - AluJo SINE Alu -7 305 2 2198 231 155 30 chr5 22671747 22672275 -180413257 + L1MCa LINE L1 1632 2093 -4864 2420 56 3 3 chr5 22672275 22672578 -180412954 + AluY SINE Alu 1 303 -8 2198 231 155 30 chr5 22672578 22672846 -180412686 + L1MCa LINE L1 2093 2326 -4631 1218 121 16 0 chr5 22672846 22673028 -180412504 - L1PA10 LINE L1 -11 6157 5973 2198 231 155 30 chr5 22673028 22673422 -180412110 + L1MCa LINE L1 2326 2972 -3985 1749 280 98 17 chr5 22673429 22674131 -180411401 + L1MCa LINE L1 7 837 -6022 1929 211 44 0 chr5 22674206 22674619 -180410913 - MSTB1 LTR MaLR 0 432 2 1643 162 65 31 chr5 22674634 22674986 -180410546 + THE1B LTR MaLR 1 364 0 11209 98 10 0 chr5 22674986 22676550 -180408982 + THE1B-int LTR MaLR 1 1580 0 2004 146 36 30 chr5 22676550 22676912 -180408620 + THE1B LTR MaLR 1 364 0 653 291 37 3 chr5 22676997 22677323 -180408209 + L1MCa LINE L1 3813 4149 -2808 5310 165 19 4 chr5 22677331 22678445 -180407087 - L1PA16 LINE L1 -1 6165 5034 425 257 0 0 chr5 22678569 22678674 -180406858 + L1MA10 LINE L1 6229 6333 -1 242 306 28 0 chr5 22679195 22679267 -180406265 - MIR SINE MIR -1 261 188 240 143 0 0 chr5 22679290 22679332 -180406200 + (CA)n Simple_repeat Simple_repeat 1 42 0 205 302 209 0 chr5 22679339 22679425 -180406107 - MIR SINE MIR -121 141 38 2455 119 0 11 chr5 22679500 22679878 -180405654 - L1PA13 LINE L1 -2 6161 5788 2134 138 37 11 chr5 22679878 22680233 -180405299 + THE1B LTR MaLR 1 364 0 392 125 78 0 chr5 22680240 22680368 -180405164 + (TA)n Simple_repeat Simple_repeat 1 138 0 1804 127 3 3 chr5 22680393 22680676 -180404856 + L1P4 LINE L1 5312 5594 -569 359 83 17 0 chr5 22681055 22681115 -180404417 + (TTTTA)n Simple_repeat Simple_repeat 2 62 0 3239 26 0 0 chr5 22681115 22681498 -180404034 - L1PA2 LINE L1 -11 6144 5762 585 0 0 0 chr5 22681498 22681566 -180403966 + L1PA2 LINE L1 5709 5776 -379 916 305 124 25 chr5 22681905 22682390 -180403142 - MLT1H1 LTR MaLR -3 552 20 1935 108 14 4 chr5 22682592 22682871 -180402661 - AluSx SINE Alu -20 292 11 239 331 120 42 chr5 22683496 22683638 -180401894 + MIR3 SINE MIR 21 173 -35 33 80 0 0 chr5 22683705 22683780 -180401752 + AT_rich Low_complexity Low_complexity 1 75 0 21 0 0 0 chr5 22684866 22684887 -180400645 + AT_rich Low_complexity Low_complexity 1 21 0 467 272 122 38 chr5 22685578 22685940 -180399592 - L1MC4 LINE L1 -1 8041 7555 272 241 111 19 chr5 22686129 22686237 -180399295 - L1MC5 LINE L1 -574 7387 7270 24 67 0 0 chr5 22686614 22686659 -180398873 + AT_rich Low_complexity Low_complexity 1 45 0 215 235 29 20 chr5 22686671 22686773 -180398759 + (TAA)n Simple_repeat Simple_repeat 1 103 0 22 0 0 0 chr5 22687605 22687627 -180397905 + AT_rich Low_complexity Low_complexity 1 22 0 2790 13 0 0 chr5 22687628 22687939 -180397593 + AluYa5 SINE Alu 1 311 0 977 141 0 6 chr5 22688359 22688529 -180397003 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 492 225 0 0 chr5 22688529 22688658 -180396874 + GA-rich Low_complexity Low_complexity 3 131 0 24 32 0 0 chr5 22689037 22689068 -180396464 + AT_rich Low_complexity Low_complexity 1 31 0 690 265 98 38 chr5 22690602 22690949 -180394583 - L1ME3A LINE L1 0 6170 5803 2262 256 89 19 chr5 22691067 22691975 -180393557 - L1M4 LINE L1 -2613 3533 2539 2290 113 0 0 chr5 22691975 22692284 -180393248 + AluSq SINE Alu 1 309 -4 2262 256 89 19 chr5 22692284 22692436 -180393096 - L1M4 LINE L1 -3607 2539 2399 213 178 0 0 chr5 22692599 22692644 -180392888 + (TG)n Simple_repeat Simple_repeat 2 46 0 1862 228 32 94 chr5 22692658 22692949 -180392583 + L1M4 LINE L1 1046 1354 -5292 1374 217 4 7 chr5 22692949 22693230 -180392302 - AluJo SINE Alu -30 282 3 1862 228 32 94 chr5 22693230 22694024 -180391508 + L1M4 LINE L1 1354 2054 -4592 403 304 39 88 chr5 22694194 22694582 -180390950 + L1M4 LINE L1 2144 2512 -4313 2846 273 69 15 chr5 22694668 22696028 -180389504 + L1M4 LINE L1 2561 3956 -2688 323 179 107 24 chr5 22696049 22696133 -180389399 + MLT1A1 LTR MaLR 1 91 -337 741 188 0 16 chr5 22696159 22696306 -180389226 + MLT1A1 LTR MaLR 229 388 -2 1650 254 37 44 chr5 22696313 22697017 -180388515 + L1M4 LINE L1 3967 4665 -1979 257 208 69 0 chr5 22697055 22697127 -180388405 - LTR67 LTR ERVL 0 557 481 2100 248 29 29 chr5 22697389 22697982 -180387550 + MLT1E LTR MaLR 1 593 0 472 266 66 80 chr5 22698062 22698412 -180387120 + L1MDa LINE L1 2208 2552 -3988 1289 249 126 9 chr5 22699002 22699541 -180385991 - L1MC4 LINE L1 -375 7667 7066 485 255 141 47 chr5 22699557 22699855 -180385677 - L1MC4 LINE L1 -1205 6837 6512 1927 119 92 9 chr5 22700380 22700708 -180384824 + THE1A LTR MaLR 1 355 0 944 267 73 25 chr5 22702576 22702946 -180382586 + MLT1D LTR MaLR 120 505 0 274 319 57 25 chr5 22703182 22703339 -180382193 + MIR SINE MIR 72 233 -29 25 0 0 0 chr5 22703636 22703661 -180381871 + AT_rich Low_complexity Low_complexity 1 25 0 227 285 65 32 chr5 22704566 22704689 -180380843 + MER65A LTR ERV1 2 128 -317 559 299 134 0 chr5 22705433 22705657 -180379875 + LTR16C LTR ERVL 236 489 -2 1907 149 30 0 chr5 22705911 22706212 -180379320 - AluSq SINE Alu -1 312 3 1807 162 53 48 chr5 22706538 22706737 -180378795 + L1PA16 LINE L1 5779 5982 -184 1240 207 88 14 chr5 22706737 22707022 -180378510 + AluJo SINE Alu 1 306 -6 1807 162 53 48 chr5 22707022 22707198 -180378334 + L1PA16 LINE L1 5982 6156 -10 262 298 0 53 chr5 22708036 22708130 -180377402 - MIR SINE MIR -10 252 164 614 309 40 28 chr5 22708132 22708384 -180377148 + MIR SINE MIR 2 256 -6 268 292 108 31 chr5 22708937 22709067 -180376465 + MIR SINE MIR 74 213 -49 258 281 85 0 chr5 22709199 22709281 -180376251 - MER117 DNA MER1_type -1 196 108 240 299 134 8 chr5 22709529 22709656 -180375876 - MIR SINE MIR -70 192 50 379 43 0 0 chr5 22710115 22710161 -180375371 + MSTA LTR MaLR 1 46 -382 2994 138 58 48 chr5 22710161 22710763 -180374769 - MER4B LTR ERV1 0 610 3 1533 145 4 8 chr5 22710765 22711007 -180374525 - MER4B-int LTR ERV1 0 6758 6518 4557 111 3 44 chr5 22711008 22711731 -180373801 + L1PA7 LINE L1 1 693 -5768 * 6488 92 10 10 chr5 22711728 22714855 -180370677 + L1PA7 LINE L1 3263 6463 -6 9472 153 69 13 chr5 22714856 22716788 -180368744 - MER4B-int LTR ERV1 -227 6531 4452 2892 162 42 4 chr5 22716787 22717250 -180368282 - MER4B-int LTR ERV1 -2670 4088 3540 * 306 0 0 0 chr5 22717250 22717284 -180368248 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2892 162 42 4 chr5 22717284 22717407 -180368125 - MER4B-int LTR ERV1 -3218 3540 3423 * 5096 197 81 51 chr5 22717402 22719687 -180365845 - MER4B-int LTR ERV1 -3012 3586 1804 1394 106 59 51 chr5 22719704 22719977 -180365555 - MER4B-int LTR ERV1 -5331 1267 993 253 156 0 44 chr5 22719997 22720042 -180365490 - LTR49 LTR ERV1 -282 313 271 259 169 0 130 chr5 22720042 22720119 -180365413 - MER4B-int LTR ERV1 -5845 753 687 329 177 0 0 chr5 22720135 22720197 -180365335 - MER4B-int LTR ERV1 -5786 812 751 2981 129 143 29 chr5 22720523 22720582 -180364950 - MER4B-int LTR ERV1 -5906 692 641 204 40 0 0 chr5 22720582 22720607 -180364925 + (CA)n Simple_repeat Simple_repeat 2 26 0 2981 129 143 29 chr5 22720607 22721168 -180364364 - MER4B-int LTR ERV1 -5957 641 1 2929 154 57 45 chr5 22721173 22721775 -180363757 - MER4B LTR ERV1 -1 609 1 1606 163 142 23 chr5 22721775 22722119 -180363413 + MSTA LTR MaLR 43 427 -1 2893 63 0 0 chr5 22722235 22722600 -180362932 - L1PA7 LINE L1 -14 6140 5776 2898 261 39 23 chr5 22722900 22723690 -180361842 - MER21B LTR ERV1 -60 803 1 273 324 0 0 chr5 22723691 22723762 -180361770 + LTR16A LTR ERVL 380 450 0 1356 117 40 22 chr5 22723842 22723949 -180361583 - AluSg/x SINE Alu 0 312 208 5202 90 41 9 chr5 22723949 22724705 -180360827 + LTR17 LTR ERV1 1 780 0 1356 117 40 22 chr5 22724705 22724820 -180360712 - AluSg/x SINE Alu -104 208 86 221 258 0 0 chr5 22724878 22724940 -180360592 + A-rich Low_complexity Low_complexity 1 62 0 581 300 107 21 chr5 22725271 22725644 -180359888 - LTR38 LTR ERV1 -11 545 141 278 248 85 35 chr5 22725614 22725755 -180359777 - LTR36 LTR ERV1 -416 195 48 * 875 10 0 0 chr5 22725756 22725856 -180359676 - L1PA4 LINE L1 -258 5897 5798 207 0 0 0 chr5 22726043 22726066 -180359466 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 631 234 27 11 chr5 22726188 22726376 -180359156 + MER83B-int LTR ERV1 3168 3358 -1522 495 143 0 120 chr5 22726364 22726497 -180359035 - LOR1-int LTR ERV1 -3644 4476 4360 * 468 245 83 52 chr5 22726509 22726778 -180358754 + LTR56 LTR ERV1 191 437 0 1240 203 14 31 chr5 22726825 22727002 -180358530 - L1 LINE L1 -2625 3521 3351 4649 94 23 6 chr5 22727002 22727651 -180357881 + PABL_A LTR ERV1 1 660 0 1240 203 14 31 chr5 22727651 22727822 -180357710 - L1 LINE L1 -2795 3351 3179 2452 141 32 2 chr5 22727829 22728324 -180357208 + L1PB1 LINE L1 5698 6205 0 681 218 0 0 chr5 22728632 22728831 -180356701 + FLAM_C SINE Alu 1 199 0 378 181 8 126 chr5 22729772 22729811 -180355721 + L1M4 LINE L1 4448 4490 -1656 1861 143 25 3 chr5 22729811 22730097 -180355435 - AluSx SINE Alu -20 292 1 378 181 8 126 chr5 22730097 22730184 -180355348 + L1M4 LINE L1 4490 4559 -1587 198 103 0 0 chr5 22730184 22730213 -180355319 + (CA)n Simple_repeat Simple_repeat 2 30 0 738 214 50 23 chr5 22730215 22730431 -180355101 - L1MC4a LINE L1 -1155 6630 6401 475 251 92 26 chr5 22730443 22730638 -180354894 + L2 LINE L2 2695 2902 -412 572 280 30 6 chr5 22730638 22730806 -180354726 + L1ME1 LINE L1 5975 6146 -20 1393 155 24 40 chr5 22730914 22731166 -180354366 + AluJo SINE Alu 33 280 -32 429 189 89 0 chr5 22731920 22732052 -180353480 - FLAM_A SINE Alu 0 160 21 1926 152 0 20 chr5 22732255 22732558 -180352974 + AluSx SINE Alu 3 299 -13 274 286 134 36 chr5 22733100 22733324 -180352208 + MIR SINE MIR 7 252 -10 1712 168 3 14 chr5 22733356 22733653 -180351879 - AluJb SINE Alu -18 294 1 198 296 19 0 chr5 22734048 22734102 -180351430 + L2 LINE L2 3203 3257 -15 2385 116 8 30 chr5 22734597 22734969 -180350563 + THE1B LTR MaLR 1 364 0 363 350 51 47 chr5 22736064 22736278 -180349254 + L2 LINE L2 2646 2860 -454 826 130 20 175 chr5 22736412 22736658 -180348874 + MER2 DNA MER2_type 2 209 -136 235 401 20 7 chr5 22736884 22737031 -180348501 + L2 LINE L2 3122 3270 -2 190 169 0 26 chr5 22737576 22737653 -180347879 + (TA)n Simple_repeat Simple_repeat 1 75 0 267 325 97 26 chr5 22738403 22738557 -180346975 - MER5B DNA MER1_type -6 172 8 366 299 56 0 chr5 22738566 22738673 -180346859 - MIR3 SINE MIR -50 158 46 288 111 0 0 chr5 22739842 22739887 -180345645 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 204 130 0 chr5 22740372 22740426 -180345106 + MIR3 SINE MIR 123 183 -25 1866 182 23 11 chr5 22741276 22741627 -180343905 + MLT1A1 LTR MaLR 11 365 0 1887 201 28 25 chr5 22741755 22742188 -180343344 + MER101 LTR ERV1 11 444 -30 2079 92 0 34 chr5 22742411 22742564 -180342968 - AluSc SINE Alu -27 282 125 441 0 0 0 chr5 22742564 22742613 -180342919 + (TG)n Simple_repeat Simple_repeat 2 50 0 2394 67 0 0 chr5 22742615 22742912 -180342620 - AluY SINE Alu -14 297 1 2079 92 0 34 chr5 22742912 22743047 -180342485 - AluSc SINE Alu -185 124 1 182 286 44 55 chr5 22743991 22744082 -180341450 - MER5B DNA MER1_type -85 93 4 988 106 0 0 chr5 22744088 22744220 -180341312 + AluSg/x SINE Alu 165 296 -16 307 275 33 33 chr5 22744872 22744992 -180340540 - L2 LINE L2 -323 2990 2871 391 232 66 137 chr5 22746102 22746343 -180339189 - MER21B LTR ERV1 -27 836 613 2178 141 113 13 chr5 22746349 22746608 -180338924 - MSTA LTR MaLR 0 428 116 1969 143 71 31 chr5 22746608 22746958 -180338574 + THE1B LTR MaLR 1 364 0 2178 141 113 13 chr5 22746958 22747087 -180338445 - MSTA LTR MaLR -312 116 1 2120 269 6 8 chr5 22747110 22747605 -180337927 - MER21B LTR ERV1 -270 593 100 319 301 176 7 chr5 22748578 22748714 -180336818 - MIR SINE MIR -56 206 48 1913 107 0 11 chr5 22748816 22749077 -180336455 + AluSq SINE Alu 2 259 -54 187 361 126 8 chr5 22749317 22749436 -180336096 - L2 LINE L2 -4 3268 3136 208 200 0 40 chr5 22749474 22749524 -180336008 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 252 361 12 0 chr5 22750560 22750643 -180334889 - L2 LINE L2 -633 2681 2598 639 228 32 6 chr5 22750657 22750807 -180334725 - MLT1A1 LTR MaLR 0 365 228 848 288 66 35 chr5 22750816 22751112 -180334420 + Charlie7 DNA MER1_type 885 1199 -1413 958 55 40 0 chr5 22751112 22751312 -180334220 + (TCTA)n Simple_repeat Simple_repeat 1 208 0 848 288 66 35 chr5 22751312 22751409 -180334123 + Charlie7 DNA MER1_type 1199 1292 -1320 25 65 0 0 chr5 22751421 22751467 -180334065 + AT_rich Low_complexity Low_complexity 1 46 0 280 247 0 14 chr5 22752117 22752190 -180333342 + CT-rich Low_complexity Low_complexity 2 73 0 1787 221 89 7 chr5 22752302 22752749 -180332783 + MLT1D LTR MaLR 21 504 -1 274 265 162 29 chr5 22752941 22753077 -180332455 + L2 LINE L2 3159 3312 -1 746 235 6 0 chr5 22753250 22753412 -180332120 + FRAM SINE Alu 1 163 -3 204 39 0 118 chr5 22754255 22754306 -180331226 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 227 371 88 24 chr5 22754614 22754943 -180330589 - L2 LINE L2 -524 2790 2441 1963 85 72 17 chr5 22754992 22755285 -180330247 + AluY SINE Alu 1 309 -2 25 83 0 0 chr5 22755450 22755510 -180330022 + AT_rich Low_complexity Low_complexity 1 60 0 21 36 0 0 chr5 22756074 22756102 -180329430 + AT_rich Low_complexity Low_complexity 1 28 0 1804 258 41 15 chr5 22757554 22757967 -180327565 - MLT1D LTR MaLR -2 503 75 745 228 147 54 chr5 22757967 22758301 -180327231 - MLT1A1 LTR MaLR 0 365 1 1804 258 41 15 chr5 22758301 22758353 -180327179 - MLT1D LTR MaLR -430 75 26 10074 31 1 2 chr5 22758730 22759981 -180325551 - L1P LINE L1 -779 5377 4126 6760 20 23 0 chr5 22759981 22760769 -180324763 + L1PA3 LINE L1 5340 6155 0 2620 52 0 0 chr5 22761398 22761708 -180323824 + AluY SINE Alu 1 310 -1 2178 84 10 13 chr5 22762096 22762395 -180323137 + AluSp SINE Alu 16 313 0 2077 116 7 3 chr5 22762409 22762719 -180322813 + AluSx SINE Alu 1 311 -1 436 228 89 13 chr5 22766089 22766247 -180319285 + MER3 DNA MER1_type 1 123 -86 1203 104 42 10 chr5 22766263 22766455 -180319077 + Tigger1 DNA MER2_type 2081 2278 -140 213 267 0 27 chr5 22766455 22766530 -180319002 + (TA)n Simple_repeat Simple_repeat 1 73 0 13125 147 29 28 chr5 22766530 22768945 -180316587 - Tigger1 DNA MER2_type 0 2418 1 482 218 158 57 chr5 22769731 22770080 -180315452 - L1MC5 LINE L1 -60 7901 7518 5033 251 35 70 chr5 22770108 22772420 -180313112 + L1MB5 LINE L1 2935 5165 -981 1339 215 91 14 chr5 22772442 22772795 -180312737 - MLT1B LTR MaLR 0 390 11 3296 192 89 25 chr5 22772798 22773719 -180311813 + L1MB5 LINE L1 5184 6166 -8 258 322 0 11 chr5 22774405 22774495 -180311037 - MLT1J LTR MaLR -299 212 124 318 235 61 10 chr5 22775964 22776062 -180309470 - MLT1J LTR MaLR -14 497 395 253 322 142 27 chr5 22776213 22776396 -180309136 - MLT1J LTR MaLR -303 208 5 2228 253 68 15 chr5 22777139 22777923 -180307609 - MER99 DNA DNA -1 827 3 1687 148 50 4 chr5 22779240 22779518 -180306014 - AluSx SINE Alu -21 291 1 28 0 0 0 chr5 22779693 22779721 -180305811 + AT_rich Low_complexity Low_complexity 1 28 0 280 333 0 0 chr5 22780564 22780666 -180304866 + CT-rich Low_complexity Low_complexity 2 103 0 25 31 0 0 chr5 22781302 22781334 -180304198 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 22781499 22781531 -180304001 + AT_rich Low_complexity Low_complexity 1 32 0 357 313 19 19 chr5 22781769 22781929 -180303603 + LTR1B LTR ERV1 39 198 -628 588 222 54 36 chr5 22782028 22782195 -180303337 + LTR28 LTR ERV1 405 574 -446 252 235 50 76 chr5 22782280 22782399 -180303133 + LTR28 LTR ERV1 905 1020 0 241 188 25 25 chr5 22782445 22782525 -180303007 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 758 282 55 42 chr5 22783545 22784003 -180301529 - L1MCa LINE L1 -5102 1324 861 509 298 105 41 chr5 22783999 22784563 -180300969 + L1M4 LINE L1 2968 3567 -2579 * 497 260 25 55 chr5 22784733 22784933 -180300599 + LTR4 LTR ERV1 7 200 -396 596 232 53 68 chr5 22785137 22785400 -180300132 + LTR4 LTR ERV1 331 589 -7 1930 259 99 34 chr5 22785582 22785751 -180299781 + L1M4 LINE L1 4111 4268 -1878 2313 74 16 22 chr5 22785751 22786063 -180299469 + AluY SINE Alu 1 310 -1 1930 259 99 34 chr5 22786063 22786876 -180298656 + L1M4 LINE L1 4268 5157 -989 1877 77 4 0 chr5 22788936 22789184 -180296348 - L1PA6 LINE L1 -4 6150 5902 27 0 0 0 chr5 22789516 22789543 -180295989 + AT_rich Low_complexity Low_complexity 1 27 0 393 256 20 94 chr5 22791414 22791617 -180293915 + LTR41 LTR ERVL 575 762 -11 1476 219 92 16 chr5 22793002 22793436 -180292096 + MLT1C LTR MaLR 1 467 0 351 0 0 0 chr5 22793497 22793536 -180291996 + (CA)n Simple_repeat Simple_repeat 1 39 0 27 29 0 0 chr5 22794094 22794128 -180291404 + AT_rich Low_complexity Low_complexity 1 34 0 21 23 0 47 chr5 22794700 22794720 -180290812 + AT_rich Low_complexity Low_complexity 1 20 -21 1543 184 0 4 chr5 22794720 22794987 -180290545 - AluJo SINE Alu -26 286 21 21 23 0 47 chr5 22794987 22795009 -180290523 + AT_rich Low_complexity Low_complexity 20 41 0 336 379 51 27 chr5 22795085 22795378 -180290154 - L2 LINE L2 0 3313 3014 537 210 0 16 chr5 22796292 22796416 -180289116 + L1MA8 LINE L1 6164 6285 -6 3599 115 46 7 chr5 22796710 22797414 -180288118 + L1PA12 LINE L1 5097 5834 -334 3373 99 16 4 chr5 22797414 22797908 -180287624 + L1PA13 LINE L1 5660 6159 -4 23 0 0 0 chr5 22797932 22797955 -180287577 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr5 22797992 22798020 -180287512 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr5 22798489 22798528 -180287004 + AT_rich Low_complexity Low_complexity 1 39 0 258 362 68 34 chr5 22799242 22799449 -180286083 - MIR SINE MIR -24 238 25 12291 193 54 29 chr5 22800465 22800977 -180284555 - L1MA8 LINE L1 -10 7302 6804 342 0 0 0 chr5 22800977 22801015 -180284517 + (TG)n Simple_repeat Simple_repeat 2 39 0 12291 193 54 29 chr5 22801015 22803660 -180281872 - L1MA8 LINE L1 -508 6804 4012 1942 154 0 0 chr5 22803660 22803958 -180281574 - AluSx SINE Alu -14 298 1 12291 193 54 29 chr5 22803958 22804795 -180280737 - L1MA8 LINE L1 -3300 4012 3197 2527 281 77 23 chr5 22804803 22805995 -180279537 - L1MA8 LINE L1 -4174 2994 1753 273 175 16 0 chr5 22807043 22807106 -180278426 + L1MC4 LINE L1 6640 6703 -1339 207 0 0 0 chr5 22807608 22807631 -180277901 + (A)n Simple_repeat Simple_repeat 1 23 0 1325 162 40 166 chr5 22807664 22807881 -180277651 - MSTD LTR MaLR 0 396 264 1903 119 3 44 chr5 22807881 22808200 -180277332 - AluSq SINE Alu -7 306 1 1325 162 40 166 chr5 22808200 22808433 -180277099 - MSTD LTR MaLR -132 264 3 29 0 0 0 chr5 22809280 22809309 -180276223 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 22809695 22809722 -180275810 + AT_rich Low_complexity Low_complexity 1 27 0 2064 108 0 0 chr5 22809940 22810226 -180275306 + AluSx SINE Alu 1 286 -26 23 0 0 0 chr5 22810226 22810249 -180275283 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr5 22810406 22810458 -180275074 + AT_rich Low_complexity Low_complexity 1 52 0 26 50 0 0 chr5 22810664 22810704 -180274828 + AT_rich Low_complexity Low_complexity 1 40 0 449 328 74 55 chr5 22810876 22811242 -180274290 - L2 LINE L2 -14 3299 2927 21 0 0 0 chr5 22811932 22811953 -180273579 + AT_rich Low_complexity Low_complexity 1 21 0 2341 62 3 3 chr5 22812020 22812347 -180273185 - AluY SINE Alu 0 311 1 932 218 166 6 chr5 22812486 22812885 -180272647 - MLT2B1 LTR ERVL 0 515 1 25 0 0 0 chr5 22814009 22814034 -180271498 + AT_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr5 22815027 22815069 -180270463 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr5 22815355 22815400 -180270132 + (TG)n Simple_repeat Simple_repeat 2 46 0 364 256 22 6 chr5 22816928 22817053 -180268479 + MLT1J2 LTR MaLR 78 201 -208 23 68 0 0 chr5 22817158 22817202 -180268330 + AT_rich Low_complexity Low_complexity 1 44 0 718 219 5 23 chr5 22817270 22817485 -180268047 - L1MA4 LINE L1 -3 6297 6087 704 245 39 10 chr5 22817485 22817689 -180267843 + MLT1A1 LTR MaLR 145 354 -11 2188 238 72 30 chr5 22817700 22818459 -180267073 + MLT1A1-int LTR MaLR 1 883 -488 1965 196 25 20 chr5 22818809 22819217 -180266315 + MLT1A1-int LTR MaLR 1326 1735 0 1343 234 33 17 chr5 22819217 22819576 -180265956 + MLT1A1 LTR MaLR 1 365 0 694 171 53 35 chr5 22819799 22819969 -180265563 - L1MA7 LINE L1 0 6291 6119 * 831 202 26 16 chr5 22819966 22820159 -180265373 + L1MA7 LINE L1 5931 6125 -166 24 32 0 0 chr5 22821586 22821617 -180263915 + AT_rich Low_complexity Low_complexity 1 31 0 817 233 11 0 chr5 22821781 22821957 -180263575 + MSTD LTR MaLR 219 396 0 1184 164 36 87 chr5 22821972 22822307 -180263225 - L1PB4 LINE L1 -301 5855 5538 * 2328 199 12 52 chr5 22822300 22823153 -180262379 + L1PB4 LINE L1 4731 5543 -613 22 94 0 0 chr5 22823155 22823219 -180262313 + AT_rich Low_complexity Low_complexity 1 64 0 2420 108 11 19 chr5 22823564 22823942 -180261590 + THE1C LTR MaLR 1 375 0 4262 215 45 12 chr5 22823952 22824959 -180260573 - L1PB4 LINE L1 -725 5429 4376 360 0 0 0 chr5 22824959 22824999 -180260533 + (TG)n Simple_repeat Simple_repeat 1 40 0 4262 215 45 12 chr5 22824999 22825199 -180260333 - L1PB4 LINE L1 -1778 4376 4184 257 92 123 77 chr5 22825343 22825408 -180260124 - L1ME LINE L1 -304 5862 5795 245 348 104 0 chr5 22825759 22825923 -180259609 - L2 LINE L2 -2 3311 3131 262 347 100 44 chr5 22826083 22826354 -180259178 - L2 LINE L2 -437 2877 2592 207 316 79 40 chr5 22826389 22826541 -180258991 - L2 LINE L2 -802 2512 2355 718 233 0 28 chr5 22929311 22929491 -180156041 - FRAM SINE Alu -1 175 1 2227 64 4 0 chr5 22929524 22929839 -180155693 + AluY SINE Alu 1 316 0 231 200 0 0 chr5 22931353 22931398 -180154134 + GA-rich Low_complexity Low_complexity 1 45 0 226 288 75 12 chr5 22932055 22932135 -180153397 + L2 LINE L2 3188 3272 0 372 289 7 27 chr5 22933189 22933338 -180152194 + MER113 DNA MER1_type? 225 370 -151 235 149 21 0 chr5 22933386 22933433 -180152099 - LTR66 LTR ERVL -171 439 392 200 184 0 0 chr5 22933433 22933471 -180152061 + CT-rich Low_complexity Low_complexity 1 38 0 337 270 214 8 chr5 22933483 22933609 -180151923 + MER5A DNA MER1_type 9 160 -29 354 213 0 43 chr5 22933624 22933718 -180151814 + MER113 DNA MER1_type? 358 447 -74 655 229 77 11 chr5 22933730 22933913 -180151619 + MER3 DNA MER1_type 10 204 -5 721 307 81 81 chr5 22934159 22934826 -180150706 + HAL1 LINE L1 25 691 -1816 769 289 140 65 chr5 22934841 22935589 -180149943 + HAL1 LINE L1 1080 1924 -583 1550 179 13 47 chr5 22935589 22935907 -180149625 + AluJo SINE Alu 6 312 0 769 289 140 65 chr5 22935907 22936166 -180149366 + HAL1 LINE L1 1924 2162 -345 276 287 89 20 chr5 22936458 22936559 -180148973 - L2 LINE L2 -13 3300 3193 438 329 109 40 chr5 22936711 22937088 -180148444 + L2 LINE L2 2910 3312 -1 21 36 0 0 chr5 22937196 22937224 -180148308 + AT_rich Low_complexity Low_complexity 1 28 0 749 152 0 35 chr5 22937924 22938069 -180147463 - FLAM_C SINE Alu -1 142 3 283 286 134 0 chr5 22938948 22939067 -180146465 + MIR SINE MIR 108 242 -20 21 0 0 0 chr5 22940011 22940032 -180145500 + AT_rich Low_complexity Low_complexity 1 21 0 750 305 65 21 chr5 22941277 22941615 -180143917 - MLT1K LTR MaLR 0 588 236 238 244 233 0 chr5 22943724 22943814 -180141718 + MER5B DNA MER1_type 1 111 -67 1606 135 42 45 chr5 22943814 22943935 -180141597 - MER39B LTR ERV1 -366 287 167 1963 163 0 0 chr5 22943935 22944235 -180141297 - AluSx SINE Alu -10 302 3 1606 135 42 45 chr5 22944235 22944401 -180141131 - MER39B LTR ERV1 -486 167 1 32 75 0 0 chr5 22944659 22944726 -180140806 + AT_rich Low_complexity Low_complexity 1 67 0 1488 192 10 30 chr5 22944781 22945078 -180140454 - AluJb SINE Alu -21 291 1 251 154 0 19 chr5 22945551 22945603 -180139929 + (CATA)n Simple_repeat Simple_repeat 3 53 0 1759 178 51 3 chr5 22945625 22945957 -180139575 - MLT2C1 LTR ERVL -49 348 1 387 0 0 0 chr5 22946917 22946960 -180138572 + (TG)n Simple_repeat Simple_repeat 2 44 0 373 264 160 0 chr5 22948337 22948481 -180137051 - MER5B DNA MER1_type 0 178 12 819 234 72 10 chr5 22948865 22949155 -180136377 + LTR37A LTR ERV1 115 422 -4 2103 123 35 30 chr5 22949500 22949873 -180135659 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr5 22950400 22950435 -180135097 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 22950843 22950864 -180134668 + AT_rich Low_complexity Low_complexity 1 21 0 308 221 59 73 chr5 22951226 22951362 -180134170 - L2 LINE L2 0 3313 3180 2008 78 25 3 chr5 22951483 22951816 -180133716 + L1PA7 LINE L1 5848 6186 0 225 169 0 0 chr5 22954058 22954117 -180131415 + (TA)n Simple_repeat Simple_repeat 2 60 0 285 383 17 0 chr5 22954319 22954439 -180131093 - L3 LINE CR1 -4 1573 1452 1944 111 44 0 chr5 22955377 22955687 -180129845 + AluSq SINE Alu 1 322 0 212 210 0 32 chr5 22956143 22956205 -180129327 + A-rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr5 22956671 22956693 -180128839 + AT_rich Low_complexity Low_complexity 1 22 0 1881 293 161 56 chr5 22957794 22958428 -180127104 - L2 LINE L2 -1680 1634 1068 1894 139 10 26 chr5 22958428 22958738 -180126794 + AluSx SINE Alu 1 305 -7 1881 293 161 56 chr5 22958738 22958913 -180126619 - L2 LINE L2 -2246 1068 913 2252 90 0 10 chr5 22958913 22959214 -180126318 + AluY SINE Alu 1 298 -13 1881 293 161 56 chr5 22959214 22959712 -180125820 - L2 LINE L2 -2401 913 188 2885 101 10 2 chr5 22960266 22960661 -180124871 - MER1A DNA MER1_type 0 529 132 1784 137 7 11 chr5 22960665 22960943 -180124589 - AluJb SINE Alu -34 278 2 218 284 84 0 chr5 22961646 22961741 -180123791 + MIR SINE MIR 160 262 0 218 344 21 21 chr5 22961755 22961851 -180123681 + MIR3 SINE MIR 60 155 -53 198 0 0 0 chr5 22963711 22963733 -180121799 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 275 133 0 4 chr5 22963744 22963948 -180121584 + AluSc SINE Alu 1 289 -10 23 0 0 0 chr5 22964319 22964342 -180121190 + AT_rich Low_complexity Low_complexity 1 23 0 285 51 0 0 chr5 22965231 22965270 -180120262 + (CA)n Simple_repeat Simple_repeat 2 40 0 1164 128 37 11 chr5 22965276 22965464 -180120068 + MSTA LTR MaLR 6 198 -230 241 323 65 0 chr5 22965516 22965640 -180119892 + L1MC/D LINE L1 5742 5873 -1935 208 281 0 0 chr5 22965737 22965794 -180119738 + (TG)n Simple_repeat Simple_repeat 2 58 0 214 237 0 0 chr5 22965864 22965902 -180119630 + polypyrimidine Low_complexity Low_complexity 5 42 0 2303 88 0 0 chr5 22965906 22966211 -180119321 - AluY SINE Alu -6 305 1 185 156 0 22 chr5 22966228 22966273 -180119259 + CT-rich Low_complexity Low_complexity 2 45 0 27 62 0 0 chr5 22966391 22966439 -180119093 + AT_rich Low_complexity Low_complexity 1 48 0 5275 117 25 5 chr5 22966584 22967420 -180118112 - L1MA3 LINE L1 0 6305 5453 244 370 19 9 chr5 22967538 22967646 -180117886 - L2 LINE L2 -6 3307 3199 1603 169 41 41 chr5 22967791 22968153 -180117379 + THE1B LTR MaLR 1 362 -2 1430 228 206 21 chr5 22968762 22969341 -180116191 + MER76 LTR ERV 1 686 -2 235 343 56 49 chr5 22969463 22969747 -180115785 - L2 LINE L2 -86 3227 2941 374 43 58 0 chr5 22969806 22969875 -180115657 + (TA)n Simple_repeat Simple_repeat 1 73 0 277 320 34 7 chr5 22970086 22970233 -180115299 + L1ME LINE L1 5669 5819 -302 22 35 0 0 chr5 22970342 22970371 -180115161 + AT_rich Low_complexity Low_complexity 1 29 0 1745 158 61 0 chr5 22971064 22971184 -180114348 + AluSx SINE Alu 1 112 -200 183 42 0 0 chr5 22971184 22971208 -180114324 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1745 158 61 0 chr5 22971208 22971366 -180114166 + AluSx SINE Alu 112 296 -16 252 130 0 0 chr5 22971939 22971985 -180113547 + (TC)n Simple_repeat Simple_repeat 1 46 0 1033 222 46 24 chr5 22973020 22973459 -180112073 + MLT1D LTR MaLR 1 505 0 369 0 0 0 chr5 22973473 22973514 -180112018 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 95 0 0 chr5 22973586 22973649 -180111883 + AT_rich Low_complexity Low_complexity 1 63 0 186 275 0 0 chr5 22973705 22973785 -180111747 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 2011 128 52 30 chr5 22974008 22974375 -180111157 + THE1C LTR MaLR 1 375 0 450 252 17 8 chr5 22974902 22975021 -180110511 - MER45A DNA AcHobo 0 178 59 242 265 48 12 chr5 22975179 22975262 -180110270 - MIR3 SINE MIR -9 199 114 23 0 0 0 chr5 22975651 22975674 -180109858 + AT_rich Low_complexity Low_complexity 1 23 0 2541 258 80 34 chr5 22976137 22976266 -180109266 + L1MDa LINE L1 1023 1145 -5395 2211 122 6 3 chr5 22976266 22976577 -180108955 + AluSx SINE Alu 1 312 0 2541 258 80 34 chr5 22976577 22977726 -180107806 + L1MDa LINE L1 1145 2360 -4180 1221 189 31 22 chr5 22977743 22977970 -180107562 + Tigger3b DNA MER2_type 1 229 -1002 1977 156 30 24 chr5 22977970 22978341 -180107191 + THE1C LTR MaLR 1 373 -2 6819 141 33 19 chr5 22978343 22979842 -180105690 + THE1C-int LTR MaLR 1 1580 0 2084 166 11 21 chr5 22979842 22980221 -180105311 + THE1C LTR MaLR 1 375 0 4815 165 41 17 chr5 22980221 22980338 -180105194 + Tigger3b DNA MER2_type 225 338 -2690 2153 58 0 0 chr5 22980338 22980595 -180104937 + AluY SINE Alu 47 303 -8 4815 165 41 17 chr5 22980595 22981455 -180104077 + Tigger3b DNA MER2_type 338 1225 -6 727 199 60 5 chr5 22981461 22981677 -180103855 + L1MDa LINE L1 2379 2606 -3934 23 0 0 0 chr5 22981734 22981757 -180103775 + AT_rich Low_complexity Low_complexity 1 23 0 2192 91 0 7 chr5 22981876 22982210 -180103322 - AluY SINE Alu 0 332 1 189 0 0 0 chr5 22982368 22982389 -180103143 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1524 118 93 89 chr5 22982391 22982671 -180102861 - AluSx SINE Alu -31 281 1 259 326 96 7 chr5 22983113 22983248 -180102284 + MIR SINE MIR 13 159 -103 2673 204 72 54 chr5 22983857 22984617 -180100915 + MER4E LTR ERV1 1 774 -5 243 323 120 15 chr5 22986240 22986373 -180099159 - MIR SINE MIR -56 206 60 22 88 0 0 chr5 22986396 22986453 -180099079 + AT_rich Low_complexity Low_complexity 1 57 0 542 323 72 43 chr5 22987013 22987431 -180098101 + L1MEd LINE L1 668 1097 -5022 28 0 0 0 chr5 22987835 22987863 -180097669 + AT_rich Low_complexity Low_complexity 1 28 0 6357 174 11 14 chr5 22988036 22989054 -180096478 - L1PA14 LINE L1 0 6161 5141 2078 120 38 27 chr5 22989054 22989422 -180096110 + THE1C LTR MaLR 1 372 -3 6357 174 11 14 chr5 22989422 22990480 -180095052 - L1PA14 LINE L1 -1020 5141 4088 2983 187 20 16 chr5 22990480 22990751 -180094781 + L1P LINE L1 2121 2390 -3756 2190 88 0 57 chr5 22990751 22991069 -180094463 + AluSc SINE Alu 1 300 -9 2983 187 20 16 chr5 22991069 22991407 -180094125 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 22991824 22991858 -180093674 + (CA)n Simple_repeat Simple_repeat 2 35 0 316 297 42 0 chr5 22991915 22992033 -180093499 - L1ME2 LINE L1 -16 6148 6026 928 260 35 22 chr5 22992039 22992405 -180093127 - L1MEc LINE L1 -3373 3009 2639 353 278 52 48 chr5 22992434 22992597 -180092935 - L1MEc LINE L1 -3959 2604 2438 1474 202 33 50 chr5 22992597 22992993 -180092539 + MLT1B LTR MaLR 2 390 0 353 278 52 48 chr5 22992993 22993077 -180092455 - L1MEc LINE L1 -4125 2438 2356 292 333 62 24 chr5 22993222 22993591 -180091941 - L1MEc LINE L1 -4899 1381 999 339 309 13 34 chr5 22993616 22993765 -180091767 - L1MEc LINE L1 -5477 1086 941 344 39 0 20 chr5 22994217 22994268 -180091264 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 688 225 0 12 chr5 22994270 22994430 -180091102 - L1PA16 LINE L1 -10 6156 5999 427 154 26 0 chr5 22994435 22994513 -180091019 + L1P LINE L1 5141 5220 -926 29 0 0 0 chr5 22995688 22995717 -180089815 + AT_rich Low_complexity Low_complexity 1 29 0 186 171 0 0 chr5 22997263 22997304 -180088228 + T-rich Low_complexity Low_complexity 1 41 0 877 219 128 0 chr5 22997410 22997606 -180087926 - MER58A DNA MER1_type -3 221 1 374 278 46 9 chr5 22997613 22997721 -180087811 + L2 LINE L2 3188 3299 -14 338 346 81 11 chr5 22999351 22999536 -180085996 - MIR SINE MIR -13 249 52 431 319 78 71 chr5 22999638 22999871 -180085661 + MLT1F-int LTR MaLR 961 1200 -171 2777 103 2 7 chr5 22999871 23000279 -180085253 + L1PA10 LINE L1 5763 6168 0 431 319 78 71 chr5 23000279 23000453 -180085079 + MLT1F-int LTR MaLR 1200 1371 0 548 237 135 70 chr5 23000454 23000815 -180084717 + MLT1F LTR MaLR 2 443 -99 1417 277 36 11 chr5 23000890 23001360 -180084172 + L1MC4 LINE L1 7350 7831 -211 2112 151 0 0 chr5 23001681 23001993 -180083539 + AluSx SINE Alu 1 312 0 21 0 0 0 chr5 23004021 23004042 -180081490 + AT_rich Low_complexity Low_complexity 1 21 0 1280 201 29 42 chr5 23004044 23004357 -180081175 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 23005449 23005472 -180080060 + AT_rich Low_complexity Low_complexity 1 23 0 183 222 0 0 chr5 23006518 23006563 -180078969 + GA-rich Low_complexity Low_complexity 2 46 0 30 45 0 0 chr5 23007556 23007600 -180077932 + AT_rich Low_complexity Low_complexity 1 44 0 183 204 0 0 chr5 23007626 23007680 -180077852 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 35 0 0 chr5 23007688 23007717 -180077815 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 23007971 23007996 -180077536 + AT_rich Low_complexity Low_complexity 1 25 0 2089 115 0 3 chr5 23009270 23009566 -180075966 - AluSq SINE Alu -18 295 1 259 286 0 17 chr5 23009594 23009713 -180075819 + (TA)n Simple_repeat Simple_repeat 2 118 0 221 250 19 0 chr5 23009853 23009905 -180075627 + (TG)n Simple_repeat Simple_repeat 2 54 0 2667 7 0 0 chr5 23010945 23011245 -180074287 - L1P1 LINE L1 -536 5619 5320 272 0 0 0 chr5 23011245 23011284 -180074248 + L1PA2 LINE L1 6116 6154 -1 209 135 0 27 chr5 23011285 23011322 -180074210 + (TA)n Simple_repeat Simple_repeat 2 37 0 1423 194 56 18 chr5 23012813 23013097 -180072435 - AluJb SINE Alu -7 295 1 1462 251 82 24 chr5 23013120 23013571 -180071961 + MLT2B1 LTR ERVL 3 479 -41 284 216 0 8 chr5 23013574 23013708 -180071824 + (TA)n Simple_repeat Simple_repeat 1 133 0 202 227 15 0 chr5 23013720 23013786 -180071746 + (TA)n Simple_repeat Simple_repeat 2 68 0 405 296 53 15 chr5 23014160 23014424 -180071108 - HAL1 LINE L1 -698 1809 1536 250 319 22 29 chr5 23014660 23014798 -180070734 - HAL1 LINE L1 -1120 1387 1251 226 348 65 36 chr5 23015150 23015288 -180070244 - HAL1 LINE L1 -1599 908 767 262 291 187 0 chr5 23015941 23016075 -180069457 - L1MC4 LINE L1 -91 7951 7793 21 0 0 0 chr5 23018263 23018284 -180067248 + AT_rich Low_complexity Low_complexity 1 21 0 2352 97 0 0 chr5 23019334 23019645 -180065887 + AluSx SINE Alu 2 312 0 255 286 0 0 chr5 23020213 23020276 -180065256 + GA-rich Low_complexity Low_complexity 3 65 0 368 357 19 13 chr5 23021459 23021616 -180063916 + MIR SINE MIR 17 174 -88 534 280 43 33 chr5 23021777 23021988 -180063544 - MIR SINE MIR -16 246 34 295 168 56 0 chr5 23022610 23022753 -180062779 + (TA)n Simple_repeat Simple_repeat 1 151 0 21 36 0 0 chr5 23023113 23023141 -180062391 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 23023670 23023693 -180061839 + AT_rich Low_complexity Low_complexity 1 23 0 1531 164 65 44 chr5 23023988 23024355 -180061177 - THE1C LTR MaLR 0 375 1 1408 253 91 32 chr5 23024574 23025037 -180060495 + MLT1E2 LTR MaLR 137 626 0 3171 89 269 0 chr5 23025873 23026415 -180059117 + LTR12 LTR ERV1 1 688 0 659 214 91 0 chr5 23076727 23076798 -180008734 - L1MA9 LINE L1 -73 6239 6176 192 77 0 0 chr5 23076798 23076824 -180008708 + (TG)n Simple_repeat Simple_repeat 1 26 0 659 214 91 0 chr5 23076824 23076939 -180008593 - L1MA9 LINE L1 -136 6176 6036 1361 115 19 0 chr5 23077168 23077403 -180008129 + L1PA7 LINE L1 5932 6170 0 2192 104 0 7 chr5 23077403 23077702 -180007830 + AluSx SINE Alu 1 297 -15 2299 136 24 56 chr5 23078344 23078649 -180006883 - LTR23 LTR ERV1 0 437 149 2183 110 3 3 chr5 23078649 23078950 -180006582 + AluSg SINE Alu 1 301 -9 2299 136 24 56 chr5 23078950 23079094 -180006438 - LTR23 LTR ERV1 -288 149 2 24 32 0 0 chr5 23079133 23079164 -180006368 + AT_rich Low_complexity Low_complexity 1 31 0 499 162 43 17 chr5 23079463 23079580 -180005952 + L1MD1 LINE L1 6108 6227 -15 229 257 27 0 chr5 23079666 23079740 -180005792 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 207 295 137 42 chr5 23079942 23080037 -180005495 - L2 LINE L2 0 3272 3169 366 245 107 71 chr5 23080193 23080389 -180005143 - MER20 DNA MER1_type -16 203 1 382 242 29 117 chr5 23080596 23080681 -180004851 - L2 LINE L2 -523 2791 2700 517 266 9 0 chr5 23080681 23080794 -180004738 - MER81 DNA DNA 0 114 1 382 242 29 117 chr5 23080794 23080823 -180004709 - L2 LINE L2 -614 2700 2670 2095 166 34 0 chr5 23080823 23081202 -180004330 + L1PB3 LINE L1 5763 6154 0 382 242 29 117 chr5 23081202 23081326 -180004206 - L2 LINE L2 -644 2670 2573 285 292 183 7 chr5 23081330 23081467 -180004065 - L2 LINE L2 -956 2358 2198 1361 214 84 25 chr5 23081467 23081823 -180003709 + MLT1B LTR MaLR 1 377 -13 2181 75 9 40 chr5 23082173 23082494 -180003038 - AluY SINE Alu 0 311 1 184 337 145 24 chr5 23082581 23082830 -180002702 - L2 LINE L2 -1841 1473 1195 2038 121 0 0 chr5 23084289 23084569 -180000963 + AluSx SINE Alu 21 300 -12 196 231 26 0 chr5 23084636 23084714 -180000818 + (TA)n Simple_repeat Simple_repeat 2 81 0 249 228 6 51 chr5 23086932 23087090 -179998442 + GA-rich Low_complexity Low_complexity 6 156 0 242 309 9 27 chr5 23087830 23087940 -179997592 - MLT1I LTR MaLR -1 408 301 4389 10 4 0 chr5 23088278 23088781 -179996751 + L1PA2 LINE L1 5650 6154 -1 21 0 0 0 chr5 23088853 23088874 -179996658 + AT_rich Low_complexity Low_complexity 1 21 0 252 59 0 0 chr5 23089646 23089680 -179995852 + (ATG)n Simple_repeat Simple_repeat 2 35 0 34 24 0 0 chr5 23091714 23091755 -179993777 + AT_rich Low_complexity Low_complexity 1 41 0 197 239 75 45 chr5 23091948 23092015 -179993517 - MIR SINE MIR 0 262 194 1540 97 5 0 chr5 23092999 23093216 -179992316 + L1PA8 LINE L1 5953 6170 -2 1043 143 0 0 chr5 23094582 23094767 -179990765 - AluSg/x SINE Alu 0 316 132 535 279 9 92 chr5 23094767 23094996 -179990536 - MIR SINE MIR -50 212 3 1997 113 0 55 chr5 23095462 23095790 -179989742 + AluSp SINE Alu 1 310 -3 7133 42 0 1 chr5 23097317 23098182 -179987350 - L1PA5 LINE L1 -13 6141 5278 * 17151 79 5 2 chr5 23098181 23101016 -179984516 + L1PA7 LINE L1 3019 5858 -296 1526 244 135 37 chr5 23101349 23101889 -179983643 - MLT1E LTR MaLR 0 593 1 320 308 7 28 chr5 23101928 23102071 -179983461 + GA-rich Low_complexity Low_complexity 4 143 0 225 236 158 47 chr5 23102586 23102713 -179982819 + MIR SINE MIR 113 253 -9 344 284 92 0 chr5 23102914 23103023 -179982509 - L2 LINE L2 -1 3312 3194 32 43 0 0 chr5 23103072 23103118 -179982414 + AT_rich Low_complexity Low_complexity 1 46 0 32 91 0 0 chr5 23104454 23104542 -179980990 + AT_rich Low_complexity Low_complexity 1 88 0 2482 47 3 0 chr5 23104550 23104848 -179980684 + AluY SINE Alu 1 299 -12 28 61 0 0 chr5 23104875 23104924 -179980608 + AT_rich Low_complexity Low_complexity 1 49 0 549 237 0 0 chr5 23106025 23106139 -179979393 + FLAM_A SINE Alu 22 135 -7 341 348 82 44 chr5 23106255 23106620 -179978912 + HAL1 LINE L1 1323 1701 -806 1549 239 74 69 chr5 23106628 23107194 -179978338 + L1MA8 LINE L1 23 591 -6439 1169 293 21 24 chr5 23107248 23107780 -179977752 + L1MA8 LINE L1 1864 2393 -4644 7404 178 67 38 chr5 23107789 23109652 -179975880 + L1MA8 LINE L1 4258 6065 -1261 190 0 67 0 chr5 23109652 23109682 -179975850 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 7404 178 67 38 chr5 23109682 23109729 -179975803 + L1MA8 LINE L1 6065 6109 -1217 228 35 0 0 chr5 23109729 23109758 -179975774 + (CA)n Simple_repeat Simple_repeat 2 30 0 7404 178 67 38 chr5 23109758 23109956 -179975576 + L1MA8 LINE L1 6109 6300 -1026 1718 189 70 57 chr5 23109956 23110496 -179975036 + LTR10B LTR ERV1 1 547 0 7404 178 67 38 chr5 23110496 23111275 -179974257 + L1MA8 LINE L1 6300 7326 0 1966 156 116 0 chr5 23111327 23111732 -179973800 - LTR47A LTR ERVL 0 452 1 2045 174 65 55 chr5 23111799 23112305 -179973227 + MER67D LTR ERV1 1 511 -3 306 275 107 34 chr5 23112498 23112760 -179972772 + L1ME LINE L1 5542 5822 -299 27 49 0 0 chr5 23113215 23113256 -179972276 + AT_rich Low_complexity Low_complexity 1 41 0 2181 89 9 16 chr5 23114056 23114403 -179971129 - AluSp SINE Alu 0 313 1 21 36 0 0 chr5 23115030 23115058 -179970474 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr5 23115190 23115241 -179970291 + AT_rich Low_complexity Low_complexity 1 51 0 194 233 17 0 chr5 23115291 23115351 -179970181 + (TA)n Simple_repeat Simple_repeat 2 62 0 242 260 82 14 chr5 23116041 23116114 -179969418 - L2 LINE L2 -11 3302 3225 516 323 37 28 chr5 23116118 23116505 -179969027 - L2 LINE L2 -246 3067 2681 196 260 0 0 chr5 23118362 23118412 -179967120 - L2 LINE L2 0 3313 3264 1398 172 0 119 chr5 23118710 23119053 -179966479 - AluSg SINE Alu -8 302 1 285 51 0 0 chr5 23119094 23119133 -179966399 + (GA)n Simple_repeat Simple_repeat 1 39 0 208 354 124 31 chr5 23119468 23119629 -179965903 - L2 LINE L2 -847 2467 2292 483 258 86 38 chr5 23122524 23122733 -179962799 - LTR16A LTR ERVL -95 355 137 311 113 19 0 chr5 23123434 23123487 -179962045 + GA-rich Low_complexity Low_complexity 1 54 0 278 269 255 14 chr5 23123599 23123744 -179961788 + MIR SINE MIR 81 260 -2 311 294 29 10 chr5 23124554 23124656 -179960876 + L2 LINE L2 3208 3311 -2 2578 48 0 3 chr5 23124961 23125270 -179960262 - AluY SINE Alu -3 308 1 2516 39 0 3 chr5 23125738 23126044 -179959488 - AluY SINE Alu -6 305 1 22 0 0 0 chr5 23126797 23126819 -179958713 + AT_rich Low_complexity Low_complexity 1 22 0 354 80 0 0 chr5 23126938 23126988 -179958544 + (TG)n Simple_repeat Simple_repeat 1 50 0 8477 205 39 90 chr5 23128945 23129978 -179955554 + L1MA2 LINE L1 14 1098 -6467 2184 105 17 0 chr5 23129978 23130272 -179955260 + AluSc SINE Alu 1 299 -10 8477 205 39 90 chr5 23130272 23131939 -179953593 + L1MA2 LINE L1 1098 2912 -4653 6510 93 1 0 chr5 23131939 23132992 -179952540 + L1PA8 LINE L1 5106 6159 -13 8477 205 39 90 chr5 23132992 23133028 -179952504 + L1MA2 LINE L1 2912 2948 -4617 7643 164 56 13 chr5 23132998 23134692 -179950840 + L1MA2 LINE L1 4914 6533 -1190 * 2280 105 19 40 chr5 23134692 23134864 -179950668 + THE1B LTR MaLR 1 175 -189 1815 120 0 0 chr5 23134864 23135123 -179950409 + AluY SINE Alu 51 309 -2 2280 105 19 40 chr5 23135123 23135322 -179950210 + THE1B LTR MaLR 175 364 0 11152 104 7 2 chr5 23135322 23136895 -179948637 + THE1B-int LTR MaLR 1 1580 0 2060 148 22 22 chr5 23136895 23137259 -179948273 + THE1B LTR MaLR 1 364 0 7643 164 56 13 chr5 23137259 23138223 -179947309 + L1MA2 LINE L1 6532 7716 -7 1378 244 107 32 chr5 23138261 23138700 -179946832 + MLT1E LTR MaLR 113 584 -9 277 295 86 19 chr5 23138831 23138936 -179946596 + MIR SINE MIR 99 210 -52 195 162 0 0 chr5 23139459 23139496 -179946036 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2358 70 3 3 chr5 23139755 23140053 -179945479 + AluY SINE Alu 1 298 -13 460 196 0 11 chr5 23140760 23140852 -179944680 + FLAM_A SINE Alu 47 137 -5 1200 183 82 63 chr5 23141416 23141783 -179943749 - MLT1A2 LTR MaLR 0 374 1 475 106 12 12 chr5 23142017 23142102 -179943430 + (TCCC)n Simple_repeat Simple_repeat 2 86 0 * 655 121 54 12 chr5 23142093 23142259 -179943273 + CT-rich Low_complexity Low_complexity 1 173 0 324 64 0 0 chr5 23142259 23142378 -179943154 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 1875 150 0 19 chr5 23142306 23142331 -179943201 - AluSx SINE Alu -5 307 283 324 64 0 0 chr5 23142331 23142378 -179943154 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1875 150 0 19 chr5 23142378 23142665 -179942867 - AluSx SINE Alu -29 283 1 426 20 0 0 chr5 23142794 23142845 -179942687 + (CA)n Simple_repeat Simple_repeat 2 52 0 351 0 0 0 chr5 23142844 23142883 -179942649 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 2254 61 0 4 chr5 23142944 23143221 -179942311 - AluY SINE Alu -20 291 16 623 342 48 58 chr5 23144586 23145001 -179940531 - L3 LINE CR1 -476 1101 691 22 35 0 0 chr5 23145050 23145079 -179940453 + AT_rich Low_complexity Low_complexity 1 29 0 314 65 65 0 chr5 23145083 23145129 -179940403 + MADE1 DNA Mariner 1 49 -31 356 354 65 65 chr5 23145153 23145342 -179940190 - L3 LINE CR1 -1023 554 363 2178 120 0 7 chr5 23145342 23145642 -179939890 + AluSx SINE Alu 3 300 -12 356 354 65 65 chr5 23145642 23145822 -179939710 - L3 LINE CR1 -1213 364 185 2014 175 41 34 chr5 23146636 23147185 -179938347 + MLT2A2 LTR ERVL 1 554 0 262 282 161 16 chr5 23148152 23148276 -179937256 + MIR SINE MIR 65 206 -56 216 146 0 49 chr5 23148390 23148431 -179937101 + L2 LINE L2 3216 3254 -18 1738 147 69 40 chr5 23148435 23148783 -179936749 + MLT1A1 LTR MaLR 1 358 -7 1186 29 0 0 chr5 23149262 23149400 -179936132 - AluY SINE Alu -21 290 153 28 71 0 0 chr5 23151552 23151608 -179933924 + AT_rich Low_complexity Low_complexity 1 56 0 25 31 0 0 chr5 23153057 23153089 -179932443 + AT_rich Low_complexity Low_complexity 1 32 0 220 321 71 18 chr5 23154421 23154533 -179930999 - MIR3 SINE MIR -49 159 42 33 0 0 0 chr5 23155031 23155064 -179930468 + AT_rich Low_complexity Low_complexity 1 33 0 1923 151 0 16 chr5 23157645 23157950 -179927582 + AluSx SINE Alu 1 300 -12 26745 45 2 0 chr5 23158476 23162609 -179922923 + L1PA5 LINE L1 2015 6154 0 2056 142 0 0 chr5 23165469 23165772 -179919760 - AluSg SINE Alu -3 307 5 236 162 0 0 chr5 23165821 23165858 -179919674 + MLT2B3 LTR ERVL 473 509 -45 205 207 17 0 chr5 23165858 23165916 -179919616 + (TA)n Simple_repeat Simple_repeat 1 59 0 * 211 232 18 0 chr5 23165878 23165934 -179919598 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 348 352 23 0 chr5 23166376 23166504 -179919028 + MIR SINE MIR 48 178 -84 2107 91 39 0 chr5 23166809 23167127 -179918405 + AluSx SINE Alu 1 312 0 24 32 0 0 chr5 23167241 23167272 -179918260 + AT_rich Low_complexity Low_complexity 1 31 0 248 313 12 0 chr5 23168206 23168286 -179917246 - MLT1L LTR MaLR -405 210 130 21 0 0 0 chr5 23169500 23169521 -179916011 + AT_rich Low_complexity Low_complexity 1 21 0 338 367 39 50 chr5 23169725 23170082 -179915450 - L2 LINE L2 -408 2906 2554 5848 233 38 65 chr5 23170105 23171940 -179913592 + L1MA4A LINE L1 1 1785 -5064 * 8123 173 23 21 chr5 23171938 23174495 -179911037 + L1MA4A LINE L1 4366 6930 -75 1477 183 55 18 chr5 23174495 23174769 -179910763 - AluJb SINE Alu -23 289 6 8123 173 23 21 chr5 23174769 23174841 -179910691 + L1MA4A LINE L1 6930 7000 -5 1369 219 11 21 chr5 23177694 23178008 -179907524 - AluJo SINE Alu 0 313 3 437 326 31 31 chr5 23179370 23179563 -179905969 - HAL1 LINE L1 -1126 1381 1189 237 296 28 0 chr5 23179941 23180012 -179905520 - AluJ/FRAM SINE Alu -16 286 214 193 102 68 23 chr5 23180052 23180140 -179905392 + (TA)n Simple_repeat Simple_repeat 2 93 0 231 161 56 7 chr5 23180151 23180294 -179905238 + (TA)n Simple_repeat Simple_repeat 2 151 0 446 272 83 74 chr5 23180326 23180650 -179904882 - HAL1 LINE L1 -2178 329 3 2019 112 3 3 chr5 23180767 23181081 -179904451 - AluSq SINE Alu 0 316 3 2631 35 0 6 chr5 23182196 23182509 -179903023 + AluY SINE Alu 1 311 0 23 54 0 0 chr5 23182924 23182961 -179902571 + AT_rich Low_complexity Low_complexity 1 37 0 1528 240 55 83 chr5 23183292 23183628 -179901904 + MER67D LTR ERV1 1 318 -196 1916 134 147 32 chr5 23183628 23183838 -179901694 - MSTA LTR MaLR -4 424 240 2121 127 3 3 chr5 23183838 23184145 -179901387 - AluSp SINE Alu -6 307 1 1916 134 147 32 chr5 23184145 23184314 -179901218 - MSTA LTR MaLR -188 240 1 1528 240 55 83 chr5 23184314 23184506 -179901026 + MER67D LTR ERV1 318 514 0 29 28 0 0 chr5 23184790 23184826 -179900706 + AT_rich Low_complexity Low_complexity 1 36 0 51 83 0 0 chr5 23185180 23185301 -179900231 + AT_rich Low_complexity Low_complexity 1 121 0 465 290 0 0 chr5 23185426 23185526 -179900006 + MER110-int LTR ERV1 3720 3819 -828 556 290 35 56 chr5 23185751 23186037 -179899495 + MER110-int LTR ERV1 3981 4260 -387 23 54 0 0 chr5 23186269 23186306 -179899226 + AT_rich Low_complexity Low_complexity 1 37 0 2369 54 14 3 chr5 23187606 23187901 -179897631 - AluY SINE Alu -13 298 1 297 75 0 0 chr5 23187968 23188008 -179897524 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 88 0 0 chr5 23188395 23188452 -179897080 + AT_rich Low_complexity Low_complexity 1 57 0 440 62 16 0 chr5 23188521 23188585 -179896947 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 22 0 0 0 chr5 23188585 23188607 -179896925 + AT_rich Low_complexity Low_complexity 1 22 0 239 311 139 8 chr5 23189139 23189261 -179896271 - L2 LINE L2 -255 3058 2921 222 191 0 0 chr5 23189315 23189357 -179896175 - L2 LINE L2 0 3313 3272 22 0 0 0 chr5 23189840 23189862 -179895670 + AT_rich Low_complexity Low_complexity 1 22 0 367 271 165 29 chr5 23190357 23190527 -179895005 + MIR SINE MIR 65 257 -5 567 284 98 55 chr5 23190961 23191434 -179894098 + MLT1D LTR MaLR 7 387 -3 3549 230 35 114 chr5 23191437 23192952 -179892580 + MLT1D-int LTR MaLR 1 1371 0 984 281 56 46 chr5 23192952 23193451 -179892081 + MLT1D LTR MaLR 1 504 -1 732 305 44 30 chr5 23193575 23193870 -179891662 - L2 LINE L2 -962 2352 2054 460 240 120 40 chr5 23194304 23194504 -179891028 - LTR45 LTR ERV1 -7 518 303 427 258 95 58 chr5 23195022 23195270 -179890262 + MLT1J LTR MaLR 64 288 -162 1755 188 19 9 chr5 23195652 23195977 -179889555 + MLT1B LTR MaLR 9 336 -54 418 90 13 13 chr5 23197116 23197194 -179888338 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 705 196 0 21 chr5 23198410 23198553 -179886979 - FLAM_C SINE Alu -3 140 1 1305 249 35 46 chr5 23199626 23200060 -179885472 + MLT1C LTR MaLR 39 467 0 3266 234 48 29 chr5 23200060 23200931 -179884601 + MLT1C-int LTR MaLR 1 888 -483 670 239 75 6 chr5 23201061 23201220 -179884312 + MLT1B LTR MaLR 298 467 0 303 306 27 18 chr5 23201229 23201340 -179884192 - MIR SINE MIR -120 142 31 29 0 0 0 chr5 23202115 23202144 -179883388 + AT_rich Low_complexity Low_complexity 1 29 0 2128 121 10 0 chr5 23202887 23203192 -179882340 + AluSq SINE Alu 3 310 -3 1824 182 0 39 chr5 23203727 23204085 -179881447 + MER2 DNA MER2_type 1 344 0 239 380 67 37 chr5 23205090 23205553 -179879979 + L2 LINE L2 2282 2758 -556 292 273 42 7 chr5 23206513 23206656 -179878876 + (TATATG)n Simple_repeat Simple_repeat 6 153 0 29 0 0 0 chr5 23207317 23207346 -179878186 + AT_rich Low_complexity Low_complexity 1 29 0 4106 117 48 0 chr5 23208054 23208677 -179876855 + MER39B LTR ERV1 1 653 0 196 344 113 41 chr5 23209207 23209402 -179876130 - MIR SINE MIR -29 233 25 194 345 63 63 chr5 23210751 23211006 -179874526 + L2 LINE L2 1536 1790 -1524 202 322 150 46 chr5 23211106 23211652 -179873880 - L2 LINE L2 -1044 2270 1668 27 49 0 0 chr5 23212685 23212726 -179872806 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr5 23213222 23213252 -179872280 + AT_rich Low_complexity Low_complexity 1 30 0 285 266 79 89 chr5 23213295 23213556 -179871976 + MLT1H LTR MaLR 1 291 -258 225 229 14 29 chr5 23213724 23213794 -179871738 + MLT1B-int LTR MaLR 5 73 -1298 2695 19 0 3 chr5 23214016 23214324 -179871208 - AluY SINE Alu -4 307 1 1284 224 65 20 chr5 23214934 23215176 -179870356 - Charlie1a DNA MER1_type -1311 1450 1220 1423 240 22 52 chr5 23215176 23215584 -179869948 + MSTD LTR MaLR 1 396 0 1284 224 65 20 chr5 23215584 23215893 -179869639 - Charlie1a DNA MER1_type -1541 1220 811 24 32 0 0 chr5 23215917 23215948 -179869584 + AT_rich Low_complexity Low_complexity 1 31 0 5857 76 14 30 chr5 23215951 23216547 -179868985 - L1P LINE L1 -1544 4602 3998 2005 116 0 0 chr5 23216547 23216824 -179868708 + AluSq SINE Alu 1 277 -36 189 0 0 0 chr5 23216833 23216854 -179868678 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5857 76 14 30 chr5 23216854 23217103 -179868429 - L1P LINE L1 -2156 3990 3761 6827 139 6 36 chr5 23217103 23219136 -179866396 - L1PA10 LINE L1 -17 6151 4154 6503 71 1 0 chr5 23219140 23219981 -179865551 - L1PA7 LINE L1 -6 6148 5307 2746 150 34 26 chr5 23219985 23220491 -179865041 - L1PA10 LINE L1 -1958 4188 3679 1667 241 62 69 chr5 23220491 23221228 -179864304 - Charlie1a DNA MER1_type -676 779 48 2538 51 0 0 chr5 23221668 23222006 -179863526 + AluY SINE Alu 1 338 0 38 0 0 0 chr5 23222040 23222078 -179863454 + AT_rich Low_complexity Low_complexity 1 38 0 448 306 149 0 chr5 23222315 23222576 -179862956 + MLT1H LTR MaLR 250 549 0 223 167 0 45 chr5 23223005 23223026 -179862506 + (TA)n Simple_repeat Simple_repeat 2 22 -42 189 0 0 0 chr5 23223026 23223047 -179862485 + (GA)n Simple_repeat Simple_repeat 2 22 0 223 167 0 45 chr5 23223047 23223091 -179862441 + (TA)n Simple_repeat Simple_repeat 22 64 0 241 129 0 65 chr5 23223091 23223153 -179862379 + LTR66 LTR ERVL 394 451 -159 34 42 0 0 chr5 23223636 23223684 -179861848 + AT_rich Low_complexity Low_complexity 1 48 0 2019 97 0 0 chr5 23223894 23224161 -179861371 + AluSc SINE Alu 38 304 -5 250 102 51 17 chr5 23224227 23224286 -179861246 + T-rich Low_complexity Low_complexity 2 62 0 233 303 14 32 chr5 23224892 23225038 -179860494 + CT-rich Low_complexity Low_complexity 1 143 0 2191 111 0 0 chr5 23225127 23225416 -179860116 - AluSg SINE Alu -21 289 1 635 307 59 70 chr5 23225595 23225966 -179859566 - MLT1J LTR MaLR -144 367 1 194 62 31 0 chr5 23226100 23226132 -179859400 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 240 229 84 24 chr5 23226139 23226222 -179859310 - L1MC4 LINE L1 -1339 6703 6616 230 79 0 26 chr5 23226394 23226432 -179859100 + (TG)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr5 23226962 23226984 -179858548 + AT_rich Low_complexity Low_complexity 1 22 0 1415 190 7 28 chr5 23227043 23227387 -179858145 - AluJb SINE Alu 0 338 1 21 36 0 0 chr5 23227432 23227460 -179858072 + AT_rich Low_complexity Low_complexity 1 28 0 5787 148 72 27 chr5 23229181 23230357 -179855175 + Tigger3b DNA MER2_type 3 1231 0 243 61 0 0 chr5 23230494 23230527 -179855005 + (TG)n Simple_repeat Simple_repeat 2 34 0 35 41 0 0 chr5 23231466 23231515 -179854017 + AT_rich Low_complexity Low_complexity 1 49 0 348 290 130 35 chr5 23231515 23231746 -179853786 - MIR SINE MIR 0 262 10 190 380 44 0 chr5 23232396 23232509 -179853023 + L2 LINE L2 2296 2413 -901 991 91 14 14 chr5 23232826 23232954 -179852578 + LTR8 LTR ERV1 1 128 -563 2812 110 23 0 chr5 23232954 23233353 -179852179 + MLT2A2 LTR ERVL 2 409 -44 227 156 0 0 chr5 23233361 23233406 -179852126 - LTR66 LTR ERVL -171 439 395 255 125 0 0 chr5 23233432 23233472 -179852060 + (TG)n Simple_repeat Simple_repeat 1 40 0 367 94 0 0 chr5 23233472 23233525 -179852007 + MLT2A2 LTR ERVL 399 451 -2 3580 105 40 42 chr5 23233527 23233888 -179851644 + LTR8 LTR ERV1 123 484 -207 3586 51 2 47 chr5 23233888 23234397 -179851135 + L1PA5 LINE L1 5664 6149 -5 3580 105 40 42 chr5 23234397 23234604 -179850928 + LTR8 LTR ERV1 484 690 -1 21 0 0 0 chr5 23234902 23234923 -179850609 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 23235501 23235523 -179850009 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 180 0 0 0 chr5 23235662 23235682 -179849850 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 230 314 74 138 chr5 23236056 23236352 -179849180 + L2 LINE L2 2995 3271 -1 620 205 92 31 chr5 23236470 23236665 -179848867 - MER3 DNA MER1_type -1 208 2 41 78 0 0 chr5 23236775 23236865 -179848667 + AT_rich Low_complexity Low_complexity 1 90 0 1844 220 74 28 chr5 23238405 23238878 -179846654 - MLT1D LTR MaLR -5 500 6 1858 151 10 0 chr5 23239662 23239953 -179845579 - AluSx SINE Alu -18 294 1 563 237 0 0 chr5 23240309 23240423 -179845109 + FLAM_A SINE Alu 2 115 -18 215 313 0 25 chr5 23241787 23241867 -179843665 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 * 221 246 0 33 chr5 23241815 23241876 -179843656 + (TATATG)n Simple_repeat Simple_repeat 3 61 0 186 43 0 0 chr5 23245210 23245233 -179840299 + (TTC)n Simple_repeat Simple_repeat 2 24 0 980 184 5 74 chr5 23245809 23246026 -179839506 + AluJb SINE Alu 1 202 -110 378 0 0 0 chr5 23246161 23246203 -179839329 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 290 48 0 chr5 23246458 23246520 -179839012 + L2 LINE L2 3206 3270 -2 2047 207 40 72 chr5 23250004 23250752 -179834780 - L1MC3 LINE L1 -528 7257 6534 31 44 0 0 chr5 23251246 23251291 -179834241 + AT_rich Low_complexity Low_complexity 1 45 0 180 296 62 25 chr5 23251786 23251867 -179833665 + L2 LINE L2 2979 3062 -210 266 0 0 29 chr5 23252202 23252237 -179833295 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 354 222 0 0 chr5 23252551 23252623 -179832909 - MLT1A2 LTR MaLR -302 72 1 266 344 194 13 chr5 23252626 23252940 -179832592 - L2 LINE L2 -390 2924 2554 642 214 55 39 chr5 23253042 23253224 -179832308 + MER5A DNA MER1_type 2 186 -3 631 333 94 15 chr5 23253234 23253576 -179831956 - L2 LINE L2 -996 2318 1950 485 242 89 32 chr5 23253586 23253776 -179831756 + MER63B DNA MER1_type 1 201 -235 252 0 0 0 chr5 23253777 23253805 -179831727 + (TA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 23254335 23254356 -179831176 + AT_rich Low_complexity Low_complexity 1 21 0 1179 141 0 0 chr5 23254651 23254821 -179830711 - LTR8 LTR ERV1 -1 690 521 1085 36 7 0 chr5 23254858 23254995 -179830537 - L1PA5 LINE L1 -5 6149 6012 21 71 0 0 chr5 23257787 23257829 -179827703 + AT_rich Low_complexity Low_complexity 1 42 0 338 336 115 65 chr5 23258618 23259112 -179826420 + L2 LINE L2 2296 2814 -500 381 328 147 31 chr5 23259252 23259578 -179825954 + L2 LINE L2 2950 3313 0 23 0 0 0 chr5 23259586 23259609 -179825923 + AT_rich Low_complexity Low_complexity 1 23 0 7694 186 11 15 chr5 23259692 23262148 -179823384 + L1MA6 LINE L1 3786 6239 -61 21 36 0 0 chr5 23262197 23262225 -179823307 + AT_rich Low_complexity Low_complexity 1 28 0 355 210 0 0 chr5 23262739 23262801 -179822731 - MLT1C LTR MaLR 0 467 406 1936 151 3 7 chr5 23262801 23263099 -179822433 - AluSx SINE Alu -15 297 1 594 245 20 7 chr5 23263115 23263266 -179822266 - MLT1A2 LTR MaLR -221 153 1 314 375 157 6 chr5 23263268 23263593 -179821939 - L2 LINE L2 -387 2927 2554 645 337 78 42 chr5 23263644 23263697 -179821835 - L2 LINE L2 -943 2371 2321 684 213 49 38 chr5 23263697 23263880 -179821652 + MER5A DNA MER1_type 2 186 -3 645 337 78 42 chr5 23263880 23264235 -179821297 - L2 LINE L2 -993 2321 1948 1204 252 67 22 chr5 23264244 23264553 -179820979 + MER63B DNA MER1_type 1 335 -727 243 0 0 0 chr5 23264553 23264580 -179820952 + (TG)n Simple_repeat Simple_repeat 2 28 0 1204 252 67 22 chr5 23264580 23264687 -179820845 + MER63B DNA MER1_type 335 436 0 796 216 17 11 chr5 23265498 23265674 -179819858 - MLT1C LTR MaLR 0 467 291 1069 155 0 0 chr5 23265675 23265889 -179819643 - AluSg/x SINE Alu 0 345 132 2041 129 0 17 chr5 23265889 23266048 -179819484 - AluSx SINE Alu -20 292 139 2430 74 0 0 chr5 23266048 23266345 -179819187 - AluSg SINE Alu -13 297 1 2041 129 0 17 chr5 23266345 23266480 -179819052 - AluSx SINE Alu -173 139 3 935 249 64 10 chr5 23266480 23266777 -179818755 - MLT1C LTR MaLR -152 315 3 25 31 0 0 chr5 23267522 23267554 -179817978 + AT_rich Low_complexity Low_complexity 1 32 0 1901 120 36 7 chr5 23267978 23268275 -179817257 + AluY SINE Alu 1 305 0 583 238 49 12 chr5 23268511 23268675 -179816857 - L1MA9 LINE L1 -194 6118 5949 2151 127 0 0 chr5 23268997 23269304 -179816228 - AluSq SINE Alu -6 307 1 2060 102 41 0 chr5 23269314 23269607 -179815925 - AluSx SINE Alu -7 305 1 24 32 0 0 chr5 23269898 23269929 -179815603 + AT_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr5 23269996 23270043 -179815489 + AT_rich Low_complexity Low_complexity 1 47 0 21 71 0 0 chr5 23271966 23272008 -179813524 + AT_rich Low_complexity Low_complexity 1 42 0 2188 145 5 35 chr5 23272239 23272612 -179812920 + THE1B LTR MaLR 1 362 -2 1777 152 11 0 chr5 23273004 23273287 -179812245 + AluSx SINE Alu 2 287 -25 292 184 0 26 chr5 23273287 23273363 -179812169 + GA-rich Low_complexity Low_complexity 3 76 0 332 343 127 26 chr5 23273529 23273658 -179811874 + L2 LINE L2 2214 2329 -985 1704 182 0 3 chr5 23273658 23273949 -179811583 + AluJo SINE Alu 13 302 -10 189 0 0 0 chr5 23273955 23273976 -179811556 + (CAGAA)n Simple_repeat Simple_repeat 2 22 0 332 343 127 26 chr5 23273976 23274425 -179811107 + L2 LINE L2 2333 2937 -377 245 29 29 0 chr5 23274560 23274594 -179810938 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2393 78 7 0 chr5 23275061 23275368 -179810164 - AluSc SINE Alu 0 309 1 290 257 18 53 chr5 23275493 23275606 -179809926 + Zaphod DNA AcHobo 3923 4031 0 639 285 75 46 chr5 23275649 23275954 -179809578 + L2 LINE L2 2995 3308 -5 28 71 0 0 chr5 23276943 23276999 -179808533 + AT_rich Low_complexity Low_complexity 1 56 0 309 298 0 22 chr5 23277268 23277374 -179808158 + MER5A DNA MER1_type 7 121 -68 1554 171 21 114 chr5 23277523 23277945 -179807587 - MLT1B LTR MaLR -7 383 1 257 0 30 0 chr5 23278680 23278713 -179806819 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1408 193 11 19 chr5 23278718 23278987 -179806545 - AluJo SINE Alu -30 282 16 8617 40 4 3 chr5 23279087 23280195 -179805337 + L1P LINE L1 2287 3395 -2751 2309 144 13 3 chr5 23280347 23280736 -179804796 - L1MC1 LINE L1 -5 6328 5936 1187 129 18 0 chr5 23280951 23281121 -179804411 + MER1B DNA MER1_type 167 339 0 638 256 14 14 chr5 23281121 23281340 -179804192 - L1M4 LINE L1 -1566 4580 4362 4883 203 10 27 chr5 23281617 23282937 -179802595 + L1MA6 LINE L1 4933 6239 -61 291 289 40 0 chr5 23283381 23283457 -179802075 - AluJ/FLAM SINE Alu -223 79 1 2656 322 81 64 chr5 23283552 23284599 -179800933 + L2 LINE L2 1069 2097 -1216 1319 224 107 57 chr5 23284599 23285040 -179800492 - MER31B LTR ERV1 0 466 4 2656 322 81 64 chr5 23285040 23286203 -179799329 + L2 LINE L2 2097 3312 -1 226 333 0 0 chr5 23286680 23286740 -179798792 - MIR SINE MIR -139 123 64 444 280 60 6 chr5 23287553 23287721 -179797811 - MER115 DNA AcHobo 0 693 517 23 78 0 0 chr5 23288181 23288232 -179797300 + AT_rich Low_complexity Low_complexity 1 51 0 3711 117 29 15 chr5 23289827 23290416 -179795116 - L1PA13 LINE L1 -4 6159 5563 2515 52 0 0 chr5 23290875 23291184 -179794348 + AluY SINE Alu 1 309 -2 187 381 24 0 chr5 23292049 23292133 -179793399 - L2 LINE L2 -6 3266 3181 1692 176 7 7 chr5 23293043 23293338 -179792194 + AluJb SINE Alu 5 299 -13 3985 166 71 42 chr5 23293844 23294751 -179790781 + L1MA10 LINE L1 5401 6333 -1 461 330 198 18 chr5 23296076 23296409 -179789123 - L2 LINE L2 0 3313 2921 756 189 17 83 chr5 23296429 23296609 -179788923 + AluJo SINE Alu 65 232 -80 1222 219 0 33 chr5 23297912 23298208 -179787324 - AluJo SINE Alu 0 308 22 2335 85 3 7 chr5 23299185 23299491 -179786041 - AluSp SINE Alu -8 305 1 1757 123 4 0 chr5 23299797 23300040 -179785492 - AluSx SINE Alu -68 244 1 194 91 30 0 chr5 23300298 23300331 -179785201 + A-rich Low_complexity Low_complexity 3 36 0 2337 216 12 26 chr5 23301172 23301680 -179783852 + MER74A LTR ERVL 3 503 -55 327 110 0 220 chr5 23301754 23301796 -179783736 + MADE1 DNA Mariner 1 10 -70 2510 53 0 37 chr5 23301796 23302117 -179783415 - AluY SINE Alu 0 311 3 327 110 0 220 chr5 23302117 23302174 -179783358 + MADE1 DNA Mariner 10 78 -2 1666 140 61 4 chr5 23302453 23302731 -179782801 - AluJb SINE Alu -7 305 12 1977 167 2 57 chr5 23303764 23304166 -179781366 - L1PA16 LINE L1 -20 6146 5767 1789 170 35 67 chr5 23304223 23304275 -179781257 - MLT1B LTR MaLR -2 388 336 1020 136 29 83 chr5 23304275 23304517 -179781015 + MER30 DNA MER1_type 2 230 0 1789 170 35 67 chr5 23304517 23304865 -179780667 - MLT1B LTR MaLR -54 336 1 2049 135 3 0 chr5 23305118 23305414 -179780118 - AluSx SINE Alu -15 297 1 653 339 55 28 chr5 23305623 23306204 -179779328 + L2 LINE L2 2716 3313 0 213 333 62 49 chr5 23306366 23306591 -179778941 - L2 LINE L2 -230 3042 2815 3124 201 8 5 chr5 23306872 23307474 -179778058 + MER6A DNA MER2_type 1 604 -1 207 232 0 0 chr5 23308340 23308396 -179777136 + (TA)n Simple_repeat Simple_repeat 2 57 0 424 266 66 111 chr5 23308716 23308942 -179776590 - MIR SINE MIR -24 238 23 559 270 111 136 chr5 23309373 23309718 -179775814 + L2 LINE L2 1842 2194 -1119 709 236 30 50 chr5 23309718 23309917 -179775615 + MIR SINE MIR 45 239 -23 559 270 111 136 chr5 23309917 23310403 -179775129 + L2 LINE L2 2194 2691 -622 2146 117 0 32 chr5 23310403 23310719 -179774813 - AluSx SINE Alu -6 306 1 559 270 111 136 chr5 23310719 23311181 -179774351 + L2 LINE L2 2691 3280 -33 444 219 0 0 chr5 23311476 23311572 -179773960 - L1MA6 LINE L1 -6 6294 6199 22 70 0 0 chr5 23311577 23311620 -179773912 + AT_rich Low_complexity Low_complexity 1 43 0 1928 143 0 31 chr5 23311657 23311979 -179773553 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 23314506 23314527 -179771005 + AT_rich Low_complexity Low_complexity 1 21 0 2580 110 3 6 chr5 23314869 23315234 -179770298 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr5 23315269 23315301 -179770231 + AT_rich Low_complexity Low_complexity 1 32 0 279 54 0 0 chr5 23315403 23315440 -179770092 + (CA)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr5 23317793 23317820 -179767712 + AT_rich Low_complexity Low_complexity 1 27 0 2958 180 36 170 chr5 23318175 23318923 -179766609 - L1MC3 LINE L1 -8 7777 7221 279 309 0 0 chr5 23318923 23319004 -179766528 - MLT1F1 LTR MaLR -442 125 45 2958 180 36 170 chr5 23319004 23319613 -179765919 - L1MC3 LINE L1 -564 7221 6532 31 44 0 0 chr5 23320106 23320151 -179765381 + AT_rich Low_complexity Low_complexity 1 45 0 1722 239 34 30 chr5 23320466 23320969 -179764563 - MLT1D LTR MaLR 0 505 1 4866 118 18 24 chr5 23320974 23321736 -179763796 + MER4E LTR ERV1 1 758 -21 21 0 0 0 chr5 23322772 23322793 -179762739 + AT_rich Low_complexity Low_complexity 1 21 0 918 182 13 0 chr5 23323289 23323448 -179762084 + MER2 DNA MER2_type 1 161 -184 230 371 0 0 chr5 23323500 23323570 -179761962 + MER2 DNA MER2_type 272 341 -4 2186 130 0 0 chr5 23323659 23323959 -179761573 - AluSq SINE Alu -13 300 1 21 57 0 0 chr5 23324017 23324052 -179761480 + AT_rich Low_complexity Low_complexity 1 35 0 452 250 47 75 chr5 23324182 23324511 -179761021 + L1ME LINE L1 5333 5653 -517 189 0 0 0 chr5 23324699 23324720 -179760812 + (TG)n Simple_repeat Simple_repeat 2 22 0 1498 135 104 4 chr5 23325543 23325802 -179759730 + AluSx SINE Alu 2 286 -26 2091 125 0 10 chr5 23326427 23326730 -179758802 + AluSg SINE Alu 1 300 -10 27 62 0 0 chr5 23326775 23326823 -179758709 + AT_rich Low_complexity Low_complexity 1 48 0 301 389 21 21 chr5 23327339 23327483 -179758049 + L1ME LINE L1 443 586 -5533 619 296 100 52 chr5 23327590 23328229 -179757303 + L1ME LINE L1 4121 4790 -1339 300 341 0 0 chr5 23328482 23328611 -179756921 + L1ME LINE L1 4941 5069 -1060 294 281 66 53 chr5 23328701 23329004 -179756528 + L1ME LINE L1 5241 5547 -598 1877 158 0 0 chr5 23329273 23329565 -179755967 + AluJb SINE Alu 1 292 -20 23 0 0 0 chr5 23329789 23329812 -179755720 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 23330056 23330086 -179755446 + AT_rich Low_complexity Low_complexity 1 30 0 356 56 38 62 chr5 23330323 23330402 -179755130 + MLT2C2 LTR ERVL 348 464 0 267 259 0 0 chr5 23331940 23331994 -179753538 - MER115 DNA AcHobo -639 54 1 2038 86 0 0 chr5 23332185 23332440 -179753092 - AluY SINE Alu -12 299 45 244 286 101 17 chr5 23332568 23332687 -179752845 + MIR SINE MIR 125 253 -9 30 45 0 0 chr5 23332977 23333021 -179752511 + AT_rich Low_complexity Low_complexity 1 44 0 192 77 0 0 chr5 23333738 23333764 -179751768 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 31 0 0 0 chr5 23333991 23334022 -179751510 + AT_rich Low_complexity Low_complexity 1 31 0 883 223 66 15 chr5 23334409 23334606 -179750926 - MER58A DNA MER1_type -16 208 2 200 346 103 22 chr5 23336002 23336187 -179749345 + L2 LINE L2 2164 2363 -951 25 40 0 20 chr5 23336729 23336746 -179748786 + AT_rich Low_complexity Low_complexity 1 17 -32 1773 162 0 17 chr5 23336746 23337048 -179748484 - AluJb SINE Alu -15 297 1 25 40 0 20 chr5 23337048 23337080 -179748452 + AT_rich Low_complexity Low_complexity 17 49 0 239 0 32 0 chr5 23337543 23337574 -179747958 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 4025 31 4 0 chr5 23337575 23338058 -179747474 - L1PA4 LINE L1 -3 6152 5668 225 167 0 0 chr5 23338061 23338097 -179747435 - MLT1I LTR MaLR -276 133 98 333 218 0 0 chr5 23338239 23338317 -179747215 + GA-rich Low_complexity Low_complexity 3 80 0 182 269 0 19 chr5 23338847 23338899 -179746633 - L2 LINE L2 -1 3312 3262 9770 252 53 26 chr5 23339048 23341734 -179743798 - HERVL-C1 LTR ERVL -2897 2757 1 335 125 0 0 chr5 23341734 23341782 -179743750 - MLT2C1 LTR ERVL 0 397 350 367 259 14 0 chr5 23341785 23341924 -179743608 + (TA)n Simple_repeat Simple_repeat 2 142 0 1700 244 6 57 chr5 23341927 23341950 -179743582 - MLT2B1 LTR ERVL -41 479 456 428 0 19 0 chr5 23341950 23342002 -179743530 + (GA)n Simple_repeat Simple_repeat 2 54 0 1700 244 6 57 chr5 23342002 23342483 -179743049 - MLT2B1 LTR ERVL -64 456 1 22 0 0 0 chr5 23342807 23342829 -179742703 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 23343411 23343438 -179742094 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 23343563 23343591 -179741941 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr5 23344376 23344423 -179741109 + AT_rich Low_complexity Low_complexity 1 47 0 718 240 87 45 chr5 23344475 23344762 -179740770 + HAL1 LINE L1 248 546 -1961 516 32 0 0 chr5 23345118 23345180 -179740352 + (TA)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 23345620 23345661 -179739871 + AT_rich Low_complexity Low_complexity 1 41 0 32 0 0 0 chr5 23345718 23345750 -179739782 + AT_rich Low_complexity Low_complexity 1 32 0 506 236 214 11 chr5 23345934 23346116 -179739416 + MER20 DNA MER1_type 1 219 0 258 309 27 27 chr5 23346214 23346324 -179739208 + MIR SINE MIR 23 132 -76 234 250 0 0 chr5 23346919 23346967 -179738565 + MLT1G1 LTR MaLR 144 191 -404 2240 90 9 0 chr5 23346997 23347319 -179738213 - L1PB1 LINE L1 0 6151 5827 44 0 0 0 chr5 23347687 23347731 -179737801 + AT_rich Low_complexity Low_complexity 1 44 0 1327 60 6 0 chr5 23347769 23347935 -179737597 - AluY SINE Alu -16 295 129 2520 45 6 6 chr5 23347937 23348248 -179737284 - AluY SINE Alu 0 311 1 341 173 107 0 chr5 23348467 23348542 -179736990 + MER103 DNA DNA 82 164 -2 1899 163 33 0 chr5 23348612 23348944 -179736588 - MER2 DNA MER2_type 0 344 2 319 345 40 40 chr5 23348967 23349193 -179736339 + MIR SINE MIR 37 262 0 345 117 0 0 chr5 23349195 23349255 -179736277 + (TGG)n Simple_repeat Simple_repeat 1 60 0 2995 93 61 4 chr5 23350180 23350640 -179734892 + LTR19A LTR ERV1 1 486 0 383 136 0 0 chr5 23350712 23350771 -179734761 - MER20 DNA MER1_type 0 219 161 767 224 18 54 chr5 23351197 23351420 -179734112 - MER20 DNA MER1_type -3 216 2 339 180 11 22 chr5 23351430 23351519 -179734013 - MER5C DNA MER1_type -1 323 236 940 179 0 0 chr5 23351695 23351851 -179733681 - FRAM SINE Alu -10 156 1 183 129 0 0 chr5 23353007 23353038 -179732494 + (TA)n Simple_repeat Simple_repeat 1 31 0 448 349 40 9 chr5 23354218 23354539 -179730993 + MER46C DNA MER2_type 7 337 -1 207 331 100 23 chr5 23354541 23354671 -179730861 - MIR3 SINE MIR -36 172 33 191 250 34 102 chr5 23355927 23356015 -179729517 + MIR SINE MIR 127 208 -54 1519 219 7 3 chr5 23357322 23357614 -179727918 + AluJb SINE Alu 2 294 -18 21 57 0 0 chr5 23358497 23358532 -179727000 + AT_rich Low_complexity Low_complexity 1 35 0 1959 133 0 3 chr5 23358714 23359030 -179726502 - AluSg SINE Alu 0 315 1 22 0 0 0 chr5 23359923 23359945 -179725587 + AT_rich Low_complexity Low_complexity 1 22 0 1475 158 3 108 chr5 23361724 23362059 -179723473 - AluJb SINE Alu -2 300 1 1262 317 129 27 chr5 23362635 23363678 -179721854 + L2 LINE L2 1732 2881 -433 1291 198 19 64 chr5 23363875 23364189 -179721343 + MLT1B LTR MaLR 87 386 -4 23 78 0 0 chr5 23364509 23364560 -179720972 + AT_rich Low_complexity Low_complexity 1 51 0 2098 129 3 0 chr5 23365213 23365516 -179720016 - AluY SINE Alu -7 304 1 686 242 14 14 chr5 23366285 23366504 -179719028 + L1M4 LINE L1 4362 4580 -1566 1113 134 17 12 chr5 23366504 23366676 -179718856 - MER1B DNA MER1_type 0 339 167 2311 144 13 3 chr5 23366881 23367270 -179718262 + L1MC1 LINE L1 5936 6328 -5 25 65 0 0 chr5 23367996 23368042 -179717490 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 23368355 23368377 -179717155 + AT_rich Low_complexity Low_complexity 1 22 0 2310 180 80 4 chr5 23369460 23369937 -179715595 + MER67D LTR ERV1 2 514 0 25 75 0 0 chr5 23371686 23371739 -179713793 + AT_rich Low_complexity Low_complexity 1 53 0 279 198 55 33 chr5 23372055 23372146 -179713386 + L1MB3 LINE L1 6090 6182 -1 27 0 0 0 chr5 23372312 23372339 -179713193 + AT_rich Low_complexity Low_complexity 1 27 0 1083 254 40 4 chr5 23372920 23373172 -179712360 + Tigger7 DNA MER2_type 3 263 -470 306 207 17 0 chr5 23373174 23373232 -179712300 + Tigger7 DNA MER2_type 2433 2491 0 30 59 0 0 chr5 23373364 23373415 -179712117 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 23373526 23373549 -179711983 + AT_rich Low_complexity Low_complexity 1 23 0 202 281 158 0 chr5 23373685 23373767 -179711765 + L3b LINE CR1 1195 1289 -294 29 78 0 0 chr5 23374177 23374241 -179711291 + AT_rich Low_complexity Low_complexity 1 64 0 2648 29 0 0 chr5 23374817 23375128 -179710404 + AluYa5 SINE Alu 1 311 0 343 224 9 0 chr5 23375642 23375874 -179709658 + (TA)n Simple_repeat Simple_repeat 1 234 0 1418 150 16 8 chr5 23375997 23376320 -179709212 - L1M1 LINE L1 -743 5403 5194 2040 134 42 25 chr5 23376445 23376802 -179708730 - THE1B LTR MaLR 0 364 2 434 304 139 22 chr5 23377082 23377441 -179708091 - L1MC/D LINE L1 -2144 5664 5264 1376 149 5 111 chr5 23377567 23377709 -179707823 - L1M1 LINE L1 -530 5775 5691 1959 141 10 0 chr5 23377709 23378015 -179707517 - AluSc SINE Alu 0 309 1 1376 149 5 111 chr5 23378015 23378215 -179707317 - L1M1 LINE L1 -614 5691 5471 25 51 0 0 chr5 23378607 23378646 -179706886 + AT_rich Low_complexity Low_complexity 1 39 0 2227 107 7 7 chr5 23379009 23379319 -179706213 - AluSx SINE Alu -2 310 1 22 56 0 0 chr5 23381082 23381118 -179704414 + AT_rich Low_complexity Low_complexity 1 36 0 2690 149 32 17 chr5 23381458 23381927 -179703605 - Tigger1 DNA MER2_type 0 2418 1943 2057 195 71 2 chr5 23381927 23382322 -179703210 + MSTA LTR MaLR 1 422 -6 10875 147 19 29 chr5 23382329 23382818 -179702714 - Tigger1 DNA MER2_type -473 1945 1453 1935 113 25 0 chr5 23382818 23383119 -179702413 - AluSx SINE Alu 0 308 1 10875 147 19 29 chr5 23383119 23384096 -179701436 - Tigger1 DNA MER2_type -965 1453 499 2120 117 3 3 chr5 23384096 23384395 -179701137 - AluSp SINE Alu -13 300 2 10875 147 19 29 chr5 23384395 23384861 -179700671 - Tigger1 DNA MER2_type -1919 499 30 22 56 0 0 chr5 23385038 23385074 -179700458 + AT_rich Low_complexity Low_complexity 1 36 0 1880 84 0 0 chr5 23386843 23387082 -179698450 - AluSg/x SINE Alu -6 304 66 1205 166 34 126 chr5 23388166 23388329 -179697203 - AluJb SINE Alu -6 296 176 2024 144 0 0 chr5 23388329 23388634 -179696898 - AluSx SINE Alu -7 305 1 1205 166 34 126 chr5 23388634 23388796 -179696736 - AluJb SINE Alu -126 176 1 180 307 123 26 chr5 23389872 23389986 -179695546 + MIR SINE MIR 16 140 -122 237 159 0 0 chr5 23391461 23391505 -179694027 + CT-rich Low_complexity Low_complexity 2 45 0 4797 131 27 67 chr5 23393601 23394517 -179691015 + THE1-int LTR MaLR 267 1146 -434 525 76 0 0 chr5 23394516 23394595 -179690937 - L1PBa LINE L1 -4427 2436 2358 * 365 295 14 7 chr5 23395107 23395246 -179690286 - L1ME LINE L1 -365 5805 5666 425 339 148 23 chr5 23395926 23396499 -179689033 + L3 LINE CR1 579 1223 -354 2102 120 3 0 chr5 23396850 23397170 -179688362 - AluSx SINE Alu 0 323 3 305 283 109 18 chr5 23397193 23397416 -179688116 - L1ME3A LINE L1 -302 5868 5616 439 294 80 54 chr5 23397924 23398486 -179687046 - L1MEd LINE L1 -4772 1497 946 5225 38 3 0 chr5 23398636 23399263 -179686269 + L1PA5 LINE L1 5517 6145 -9 26 0 0 0 chr5 23399263 23399289 -179686243 + AT_rich Low_complexity Low_complexity 1 26 0 1299 190 149 31 chr5 23399568 23399608 -179685924 + MSTD LTR MaLR 38 72 -324 2109 104 37 13 chr5 23399608 23399906 -179685626 - AluSq SINE Alu -8 305 1 1299 190 149 31 chr5 23399906 23400186 -179685346 + MSTD LTR MaLR 72 396 0 407 330 65 33 chr5 23400254 23400530 -179685002 + LTR33 LTR ERVL 235 519 -2 379 190 27 15 chr5 23400618 23400889 -179684643 + (TA)n Simple_repeat Simple_repeat 1 274 0 494 341 51 20 chr5 23401478 23401733 -179683799 + L2 LINE L2 1443 1705 -1609 193 195 0 24 chr5 23401902 23401943 -179683589 + L3 LINE CR1 1441 1480 -97 641 297 113 63 chr5 23402196 23402738 -179682794 + L2 LINE L2 1776 2344 -970 610 191 20 7 chr5 23402742 23402889 -179682643 + L1MC3 LINE L1 7636 7784 -1 2090 113 37 0 chr5 23405529 23405829 -179679703 + AluSx SINE Alu 1 311 -1 249 318 69 42 chr5 23406023 23406212 -179679320 + L2 LINE L2 2221 2414 -900 420 294 14 65 chr5 23406386 23406600 -179678932 - MLT1K LTR MaLR -3 585 383 209 286 0 0 chr5 23407345 23407394 -179678138 + L2 LINE L2 3255 3303 -10 2386 74 3 3 chr5 23408565 23408686 -179676846 + AluY SINE Alu 1 121 -190 209 30 61 0 chr5 23408686 23408719 -179676813 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2386 74 3 3 chr5 23408719 23408907 -179676625 + AluY SINE Alu 120 310 -1 2084 120 0 13 chr5 23408925 23409224 -179676308 + AluSq SINE Alu 1 295 -18 206 121 0 0 chr5 23409822 23409855 -179675677 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 209 286 54 62 chr5 23410217 23410329 -179675203 + L2 LINE L2 2915 3025 -288 267 220 10 160 chr5 23410392 23410492 -179675040 + L2 LINE L2 3186 3270 -2 1890 149 68 11 chr5 23411013 23411368 -179674164 + THE1C LTR MaLR 1 375 0 209 323 96 30 chr5 23411845 23412043 -179673489 + L2 LINE L2 2258 2468 -846 539 292 92 26 chr5 23412822 23413017 -179672515 + MIR SINE MIR 27 234 -28 23 0 0 0 chr5 23413913 23413936 -179671596 + AT_rich Low_complexity Low_complexity 1 23 0 727 114 18 0 chr5 23413962 23414076 -179671456 - L1PA13 LINE L1 -18 6145 6030 610 100 11 0 chr5 23414076 23414166 -179671366 + L1PA12 LINE L1 5893 5983 -185 1231 304 154 14 chr5 23416082 23416867 -179668665 - L2 LINE L2 -942 2372 1478 1133 221 32 39 chr5 23417765 23418120 -179667412 + MLT2D LTR ERVL 2 408 -6 1961 137 64 19 chr5 23419131 23419490 -179666042 + THE1C LTR MaLR 1 375 0 3855 131 65 0 chr5 23419491 23420086 -179665446 + THE1C-int LTR MaLR 2 635 -945 2514 94 11 0 chr5 23420086 23420437 -179665095 - THE1A LTR MaLR 0 355 1 6236 129 18 15 chr5 23420437 23421384 -179664148 + THE1C-int LTR MaLR 631 1580 0 1816 148 93 6 chr5 23421384 23421729 -179663803 + THE1C LTR MaLR 1 375 0 522 316 130 33 chr5 23422748 23423109 -179662423 + MLT1J2 LTR MaLR 1 396 -54 317 362 67 37 chr5 23423863 23424161 -179661371 + L2 LINE L2 2217 2523 -791 248 328 69 9 chr5 23424273 23424389 -179661143 - LTR33 LTR ERVL -91 430 308 510 263 53 46 chr5 23424490 23424642 -179660890 - LTR33 LTR ERVL -358 163 11 194 222 111 71 chr5 23424869 23424968 -179660564 + L2 LINE L2 663 765 -2549 222 346 48 119 chr5 23426925 23427430 -179658102 - L2 LINE L2 0 3272 2804 558 184 0 0 chr5 23427490 23427577 -179657955 - Tigger7 DNA MER2_type 0 2487 2401 256 135 0 19 chr5 23427580 23427632 -179657900 - Tigger7 DNA MER2_type -1961 526 476 1229 218 39 18 chr5 23427633 23427913 -179657619 - Tigger7 DNA MER2_type -2201 286 1 206 206 15 29 chr5 23428373 23428441 -179657091 + A-rich Low_complexity Low_complexity 4 70 0 252 248 120 48 chr5 23428469 23428594 -179656938 + L1MC5 LINE L1 7010 7143 -818 216 241 0 35 chr5 23429343 23429401 -179656131 + (CATA)n Simple_repeat Simple_repeat 3 58 0 223 286 12 24 chr5 23429450 23429497 -179656035 + G-rich Low_complexity Low_complexity 4 51 -35 1662 201 27 56 chr5 23429497 23429644 -179655888 + MLT1A1 LTR MaLR 1 151 -214 1585 191 3 33 chr5 23429644 23429948 -179655584 - AluJo SINE Alu -17 295 1 1662 201 27 56 chr5 23429948 23430174 -179655358 + MLT1A1 LTR MaLR 151 363 -2 223 286 12 24 chr5 23430174 23430210 -179655322 + G-rich Low_complexity Low_complexity 51 86 0 201 125 0 0 chr5 23430759 23430791 -179654741 - MIR SINE MIR -112 150 119 2376 143 6 3 chr5 23431489 23431852 -179653680 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr5 23433003 23433031 -179652501 + AT_rich Low_complexity Low_complexity 1 28 0 636 304 122 61 chr5 23433111 23433679 -179651853 + L1M4 LINE L1 2382 2914 -3232 1424 259 72 13 chr5 23433679 23434154 -179651378 - MLT1D LTR MaLR 0 505 3 636 304 122 61 chr5 23434154 23434771 -179650761 + L1M4 LINE L1 2914 3635 -2511 267 195 134 0 chr5 23434942 23435024 -179650508 + L1MB8 LINE L1 1149 1241 -5301 14843 233 31 40 chr5 23435028 23435230 -179650302 + L1PA15 LINE L1 2 204 -6612 16487 48 5 1 chr5 23435230 23438088 -179647444 + L1PA5 LINE L1 3274 6147 -7 14843 233 31 40 chr5 23438088 23444381 -179641151 + L1PA15 LINE L1 204 6608 -208 2168 166 38 24 chr5 23444381 23444803 -179640729 - MSTA LTR MaLR 0 428 1 14843 233 31 40 chr5 23444803 23444990 -179640542 + L1PA15 LINE L1 6608 6795 -21 794 133 7 22 chr5 23444993 23445128 -179640404 + MSTA LTR MaLR 296 428 0 1755 254 33 52 chr5 23445161 23446090 -179639442 + L1MB8 LINE L1 1202 2099 -4547 25 0 0 0 chr5 23446145 23446170 -179639362 + AT_rich Low_complexity Low_complexity 1 25 0 1808 235 68 24 chr5 23446197 23446694 -179638838 + MLT2B1 LTR ERVL 1 519 -1 977 249 83 51 chr5 23446774 23447454 -179638078 + L1MB8 LINE L1 2363 3069 -3575 3225 219 45 47 chr5 23447457 23448414 -179637118 + L1MB8 LINE L1 4805 5761 -915 1957 115 7 4 chr5 23448414 23448717 -179636815 + AluSg SINE Alu 3 306 0 3225 219 45 47 chr5 23448717 23449631 -179635901 + L1MB8 LINE L1 5761 6675 -1 1982 177 43 33 chr5 23450905 23451449 -179634083 - MLT2A2 LTR ERVL 0 554 1 2147 73 0 3 chr5 23451570 23451856 -179633676 + AluY SINE Alu 24 308 -3 209 310 20 76 chr5 23451865 23452062 -179633470 - L2 LINE L2 -221 3051 2866 196 368 29 0 chr5 23452124 23452192 -179633340 + MIR SINE MIR 49 118 -90 189 107 0 0 chr5 23452205 23452233 -179633299 + (T)n Simple_repeat Simple_repeat 1 28 0 332 374 138 7 chr5 23453538 23453801 -179631731 + L2 LINE L2 2556 2783 -530 2078 203 49 79 chr5 23453801 23454372 -179631160 - MLT2B3 LTR ERVL 0 554 1 332 374 138 7 chr5 23454372 23454520 -179631012 + L2 LINE L2 2783 3017 -296 386 248 78 35 chr5 23454554 23454695 -179630837 + L2 LINE L2 3167 3313 0 23 0 0 0 chr5 23455446 23455469 -179630063 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr5 23456515 23456538 -179628994 + (T)n Simple_repeat Simple_repeat 1 23 0 12417 158 51 19 chr5 23456538 23458829 -179626703 + Tigger1 DNA MER2_type 55 2417 -1 257 266 65 78 chr5 23459724 23459878 -179625654 - MARNA DNA Mariner -358 228 77 336 343 41 30 chr5 23459893 23460062 -179625470 + MIR SINE MIR 15 185 -77 26 50 0 0 chr5 23460128 23460168 -179625364 + AT_rich Low_complexity Low_complexity 1 40 0 1160 254 58 29 chr5 23460176 23460519 -179625013 - MLT1A2 LTR MaLR -4 370 18 246 245 19 0 chr5 23461959 23462012 -179623520 - L2 LINE L2 -20 3252 3199 211 226 78 87 chr5 23463936 23464051 -179621481 + L2 LINE L2 3012 3125 -188 1771 154 26 47 chr5 23464074 23464457 -179621075 - THE1C LTR MaLR 0 375 1 563 141 45 58 chr5 23464488 23464644 -179620888 + L1MB7 LINE L1 6031 6184 0 966 337 106 33 chr5 23465943 23466587 -179618945 + L2 LINE L2 2129 2819 -495 198 0 0 0 chr5 23466771 23466793 -179618739 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 711 146 26 32 chr5 23466797 23467062 -179618470 + CT-rich Low_complexity Low_complexity 1 263 0 2164 123 7 0 chr5 23467068 23467378 -179618154 - AluSq SINE Alu -1 312 1 1961 114 23 0 chr5 23467416 23467715 -179617817 - AluSp SINE Alu -2 311 6 339 407 66 4 chr5 23467909 23468167 -179617365 + L2 LINE L2 2493 2766 -548 1106 262 16 50 chr5 23469105 23469605 -179615927 + L1ME3 LINE L1 5295 5777 -385 826 155 8 0 chr5 23469645 23469774 -179615758 - AluJb SINE Alu -30 282 153 341 227 0 13 chr5 23469775 23469850 -179615682 - AluSp SINE Alu -106 197 124 349 284 96 57 chr5 23469858 23470201 -179615331 + L1ME3 LINE L1 5791 6160 -6 216 0 0 0 chr5 23470212 23470236 -179615296 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 449 250 39 0 chr5 23470953 23471057 -179614475 - MLT1D LTR MaLR -5 500 393 21 57 0 0 chr5 23471239 23471274 -179614258 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 23472323 23472356 -179613176 + AT_rich Low_complexity Low_complexity 1 33 0 277 233 41 0 chr5 23472475 23472548 -179612984 + (CATA)n Simple_repeat Simple_repeat 1 76 0 362 307 41 5 chr5 23472550 23472768 -179612764 - L1MC4 LINE L1 -122 7920 7695 22 0 0 0 chr5 23472869 23472891 -179612641 + AT_rich Low_complexity Low_complexity 1 22 0 1208 159 5 45 chr5 23473288 23473508 -179612024 - AluJb SINE Alu -99 213 3 21 0 0 0 chr5 23473643 23473664 -179611868 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 23474695 23474719 -179610813 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 23476855 23476883 -179608649 + AT_rich Low_complexity Low_complexity 1 28 0 1969 146 21 29 chr5 23477011 23477389 -179608143 - THE1C LTR MaLR 0 375 1 379 282 103 8 chr5 23477475 23477592 -179607940 - MIR SINE MIR -75 187 60 869 218 29 0 chr5 23477740 23477910 -179607622 - FAM SINE Alu 0 175 1 530 358 100 40 chr5 23478607 23479074 -179606458 + L2 LINE L2 2051 2566 -748 2542 36 0 3 chr5 23479074 23479380 -179606152 - AluY SINE Alu -6 305 1 530 358 100 40 chr5 23479380 23479533 -179605999 + L2 LINE L2 2566 2708 -606 186 341 93 66 chr5 23479641 23479867 -179605665 + L2 LINE L2 2736 2967 -347 372 243 142 20 chr5 23480034 23480182 -179605350 - MER52C LTR ERV1 -139 1139 974 411 160 75 0 chr5 23481035 23481141 -179604391 + L1PB4 LINE L1 6042 6155 -1 2214 147 106 3 chr5 23481187 23481574 -179603958 - MSTC LTR MaLR -1 427 1 183 204 0 0 chr5 23481638 23481682 -179603850 + CT-rich Low_complexity Low_complexity 2 45 0 * 242 106 21 0 chr5 23481677 23481724 -179603808 + (TC)n Simple_repeat Simple_repeat 2 49 0 666 212 45 18 chr5 23482198 23482377 -179603155 + MLT1J LTR MaLR 1 150 -259 241 260 68 48 chr5 23482487 23482633 -179602899 + MLT1L LTR MaLR 445 593 -22 222 37 0 0 chr5 23482961 23482988 -179602544 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 630 185 0 25 chr5 23482988 23483107 -179602425 - FLAM_C SINE Alu -25 118 3 23 0 0 0 chr5 23483507 23483530 -179602002 + AT_rich Low_complexity Low_complexity 1 23 0 1024 185 70 33 chr5 23483881 23484151 -179601381 - L1MA10 LINE L1 -1 6333 6054 640 286 58 0 chr5 23484203 23484392 -179601140 - MER20 DNA MER1_type 0 219 20 433 285 80 0 chr5 23484434 23484571 -179600961 - MLT1J1 LTR MaLR -266 180 33 480 102 66 6 chr5 23484796 23484962 -179600570 + (TA)n Simple_repeat Simple_repeat 1 176 0 1435 225 49 28 chr5 23485106 23485493 -179600039 + MSTD LTR MaLR 2 396 0 2085 135 79 15 chr5 23486960 23487300 -179598232 + THE1B LTR MaLR 3 364 0 6897 91 4 8 chr5 23487300 23488253 -179597279 + THE1B-int LTR MaLR 1 949 -631 1437 67 0 0 chr5 23488250 23488430 -179597102 + THE1B-int LTR MaLR 1391 1570 -10 * 1123 128 59 32 chr5 23488430 23488617 -179596915 + THE1B LTR MaLR 173 364 0 247 221 0 15 chr5 23488622 23488690 -179596842 + (TA)n Simple_repeat Simple_repeat 2 68 0 1470 197 18 82 chr5 23490021 23490411 -179595121 - MLT1A1 LTR MaLR 0 365 1 697 237 139 32 chr5 23490558 23490896 -179594636 - MLT1A2 LTR MaLR 0 374 1 862 47 0 0 chr5 23491156 23491263 -179594269 - THE1-int LTR MaLR -1207 373 267 880 215 38 10 chr5 23492548 23492757 -179592775 - L1MB1 LINE L1 -22 6167 5953 323 255 89 51 chr5 23492806 23492963 -179592569 + MIR SINE MIR 34 196 -66 912 206 38 10 chr5 23495455 23495664 -179589868 - L1MB1 LINE L1 -22 6167 5953 276 341 116 12 chr5 23497674 23497847 -179587685 + MIR SINE MIR 24 214 -48 255 278 63 63 chr5 23497936 23498127 -179587405 - MIR SINE MIR -58 204 14 23 0 0 0 chr5 23498487 23498510 -179587022 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 23498752 23498788 -179586744 + (TG)n Simple_repeat Simple_repeat 2 37 0 1428 93 4 18 chr5 23501691 23501916 -179583616 - L1MA1 LINE L1 -3 6299 6078 3403 218 60 17 chr5 23502623 23502765 -179582767 - L1MB8 LINE L1 -1 6177 6043 2115 116 0 3 chr5 23502765 23503057 -179582475 - AluSc SINE Alu -17 292 2 3403 218 60 17 chr5 23503057 23504149 -179581383 - L1MB8 LINE L1 -135 6043 4900 345 263 15 80 chr5 23504174 23504311 -179581221 + MIR SINE MIR 108 235 -27 2073 138 0 0 chr5 23504536 23504840 -179580692 + AluSc SINE Alu 1 304 -5 1709 168 0 23 chr5 23504928 23505237 -179580295 - AluJb SINE Alu -10 302 1 25 65 0 0 chr5 23507220 23507266 -179578266 + AT_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr5 23507385 23507410 -179578122 + AT_rich Low_complexity Low_complexity 1 25 0 307 350 186 4 chr5 23507807 23508087 -179577445 - L3 LINE CR1 0 1577 1247 437 314 116 5 chr5 23508359 23508566 -179576966 - L3 LINE CR1 -368 1209 980 222 237 130 21 chr5 23508920 23509037 -179576495 + MIR SINE MIR 43 174 -88 269 263 13 0 chr5 23509359 23509435 -179576097 + GA-rich Low_complexity Low_complexity 4 80 0 1752 189 117 8 chr5 23509498 23509884 -179575648 + MSTB1 LTR MaLR 1 428 -4 658 203 0 15 chr5 23510530 23510663 -179574869 - FLAM_A SINE Alu -2 140 10 259 352 0 9 chr5 23510765 23510870 -179574662 - L2 LINE L2 0 3313 3210 204 40 0 0 chr5 23511454 23511479 -179574053 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1233 163 5 5 chr5 23511481 23511683 -179573849 - AluJo SINE Alu -30 282 81 226 222 0 0 chr5 23512296 23512359 -179573173 - L1MC4 LINE L1 -1339 6703 6641 4274 72 5 12 chr5 23512359 23512944 -179572588 - L1PA8 LINE L1 -13 6159 5579 929 124 39 0 chr5 23512947 23513100 -179572432 + L1P LINE L1 4793 4951 -1195 23 0 0 0 chr5 23513101 23513124 -179572408 + AT_rich Low_complexity Low_complexity 1 23 0 2408 59 0 10 chr5 23513610 23513915 -179571617 + AluY SINE Alu 1 302 -9 23 33 0 0 chr5 23514078 23514108 -179571424 + AT_rich Low_complexity Low_complexity 1 30 0 2391 55 0 13 chr5 23514813 23515125 -179570407 + AluY SINE Alu 1 308 -3 1189 229 98 33 chr5 23515211 23515577 -179569955 + MLT1B LTR MaLR 1 390 0 2243 111 3 0 chr5 23515650 23515948 -179569584 - AluSq SINE Alu -14 299 1 531 0 0 0 chr5 23516204 23516263 -179569269 + (TA)n Simple_repeat Simple_repeat 1 59 0 315 0 0 0 chr5 23516263 23516298 -179569234 + (TG)n Simple_repeat Simple_repeat 1 35 0 1763 165 32 3 chr5 23517420 23517705 -179567827 + AluSx SINE Alu 1 293 -19 310 350 68 38 chr5 23517991 23518391 -179567141 + MLT1L LTR MaLR 175 586 -29 483 331 124 0 chr5 23518541 23518807 -179566725 + L2 LINE L2 2127 2425 -889 198 312 111 75 chr5 23518846 23519125 -179566407 + L2 LINE L2 2606 2894 -420 200 337 48 53 chr5 23519440 23519627 -179565905 + L2 LINE L2 3090 3275 -38 214 292 28 0 chr5 23522524 23522596 -179562936 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 297 0 0 0 chr5 23522657 23522690 -179562842 + (CA)n Simple_repeat Simple_repeat 2 34 0 197 353 0 14 chr5 23522745 23522826 -179562706 - MIR SINE MIR -58 150 70 357 62 0 0 chr5 23523017 23523065 -179562467 + (CA)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr5 23524009 23524050 -179561482 + AT_rich Low_complexity Low_complexity 1 41 0 359 293 157 15 chr5 23524129 23524327 -179561205 - L1ME LINE L1 -313 5808 5583 23 0 0 0 chr5 23525188 23525211 -179560321 + AT_rich Low_complexity Low_complexity 1 23 0 180 372 12 12 chr5 23525762 23525848 -179559684 - L2 LINE L2 -13 3300 3215 248 301 68 8 chr5 23526887 23527020 -179558512 + L1M4 LINE L1 2448 2588 -3558 24 0 0 0 chr5 23527020 23527044 -179558488 + AT_rich Low_complexity Low_complexity 1 24 0 206 327 0 0 chr5 23529609 23529664 -179555868 + L2 LINE L2 3200 3254 -18 23 0 0 0 chr5 23529928 23529951 -179555581 + AT_rich Low_complexity Low_complexity 1 23 0 525 340 15 30 chr5 23530140 23530402 -179555130 - MIR SINE MIR -3 259 2 542 247 52 72 chr5 23530625 23530684 -179554848 + MIR SINE MIR 41 100 -162 2209 111 0 7 chr5 23530684 23530991 -179554541 - AluSc SINE Alu -4 305 1 542 247 52 72 chr5 23530991 23531125 -179554407 + MIR SINE MIR 100 230 -32 207 324 42 0 chr5 23532960 23533031 -179552501 - L2 LINE L2 -2 3311 3238 1725 109 7 29 chr5 23533106 23533381 -179552151 + AluSg SINE Alu 38 306 -4 2076 144 0 0 chr5 23533392 23533698 -179551834 + AluSx SINE Alu 1 306 -6 5507 150 62 64 chr5 23533829 23535063 -179550469 + Tigger3b DNA MER2_type 1 1231 0 981 262 63 77 chr5 23536100 23536706 -179548826 + MER77 LTR ERV1 119 679 -4 335 131 33 0 chr5 23537395 23537456 -179548076 + LTR60 LTR ERV1 1 63 -523 230 0 33 0 chr5 23537569 23537599 -179547933 + (CA)n Simple_repeat Simple_repeat 2 32 0 1727 147 41 80 chr5 23537633 23538021 -179547511 + THE1C LTR MaLR 1 373 -2 3831 110 79 90 chr5 23538025 23538806 -179546726 + THE1C-int LTR MaLR 3 775 -805 2451 109 0 62 chr5 23538783 23539215 -179546317 + THE1C-int LTR MaLR 1176 1580 0 * 1886 144 61 25 chr5 23539215 23539577 -179545955 + THE1C LTR MaLR 1 375 0 201 340 70 10 chr5 23539715 23539815 -179545717 + L2 LINE L2 3137 3242 -30 469 345 11 6 chr5 23541512 23541686 -179543846 - MIR SINE MIR -75 187 13 32 26 0 0 chr5 23541758 23541797 -179543735 + AT_rich Low_complexity Low_complexity 1 39 0 3160 109 4 0 chr5 23541797 23542266 -179543266 - L1PB2 LINE L1 0 6151 5681 309 293 89 0 chr5 23542268 23542391 -179543141 - L1ME LINE L1 -293 5828 5695 32 43 0 0 chr5 23542417 23542463 -179543069 + AT_rich Low_complexity Low_complexity 1 46 0 186 284 99 25 chr5 23542669 23542750 -179542782 + MIR SINE MIR 48 134 -128 511 123 0 0 chr5 23543046 23543119 -179542413 - MLT1A1 LTR MaLR 0 365 293 930 160 0 0 chr5 23543166 23543310 -179542222 - MLT1A1 LTR MaLR -221 144 1 2554 194 36 1 chr5 23543469 23544242 -179541290 - L1MC3 LINE L1 0 7785 5428 21 36 0 0 chr5 23544925 23544953 -179540579 + AT_rich Low_complexity Low_complexity 1 28 0 409 254 110 44 chr5 23545244 23545630 -179539902 - L1MEc LINE L1 -4554 1878 1501 325 235 18 123 chr5 23545761 23545931 -179539601 - L1MEc LINE L1 -5136 1273 1122 21 0 0 0 chr5 23546135 23546156 -179539376 + AT_rich Low_complexity Low_complexity 1 21 0 835 249 39 53 chr5 23546278 23546563 -179538969 - MLT1A1 LTR MaLR -84 281 1 679 254 69 78 chr5 23546687 23547201 -179538331 - MLT1E1 LTR MaLR -10 644 1 349 336 78 33 chr5 23547377 23547621 -179537911 + MIR SINE MIR 8 262 0 216 67 0 0 chr5 23547801 23547831 -179537701 + (CAA)n Simple_repeat Simple_repeat 2 31 0 383 282 50 77 chr5 23548692 23548873 -179536659 + MER5B DNA MER1_type 3 178 0 1955 192 0 26 chr5 23549664 23550054 -179535478 - MLT1B LTR MaLR -7 383 4 202 216 0 0 chr5 23550054 23550091 -179535441 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 279 0 0 0 chr5 23550091 23550122 -179535410 + (CA)n Simple_repeat Simple_repeat 2 32 0 1654 223 58 24 chr5 23550126 23550538 -179534994 + MLT1C LTR MaLR 42 467 0 23 54 0 0 chr5 23550567 23550604 -179534928 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 23550880 23550907 -179534625 + AT_rich Low_complexity Low_complexity 1 27 0 363 311 56 22 chr5 23551635 23551815 -179533717 + MIR SINE MIR 31 216 -46 181 340 52 26 chr5 23552403 23552556 -179532976 + MIR SINE MIR 106 262 0 319 322 49 28 chr5 23552645 23552788 -179532744 + MIR SINE MIR 21 166 -96 28 29 0 0 chr5 23553031 23553066 -179532466 + AT_rich Low_complexity Low_complexity 1 35 0 1311 140 48 40 chr5 23555033 23555283 -179530249 + THE1B LTR MaLR 113 364 0 5279 134 5 0 chr5 23555283 23556084 -179529448 + THE1B-int LTR MaLR 1 805 -775 257 267 47 0 chr5 23556186 23556272 -179529260 + MLT1D LTR MaLR 163 252 -253 197 62 0 31 chr5 23556279 23556311 -179529221 + (TA)n Simple_repeat Simple_repeat 1 31 0 361 189 22 0 chr5 23556846 23556936 -179528596 + (TA)n Simple_repeat Simple_repeat 2 93 0 234 75 100 0 chr5 23557087 23557127 -179528405 - L1MA6 LINE L1 -349 5951 5908 2754 179 30 4 chr5 23557298 23557858 -179527674 - L1MA6 LINE L1 -401 5899 5325 1703 174 41 41 chr5 23558073 23558436 -179527096 + MLT1A1 LTR MaLR 1 363 -2 21 0 0 0 chr5 23558558 23558579 -179526953 + AT_rich Low_complexity Low_complexity 1 21 0 316 273 159 15 chr5 23558833 23558965 -179526567 + MIR SINE MIR 73 223 -39 21 0 0 0 chr5 23559409 23559430 -179526102 + AT_rich Low_complexity Low_complexity 1 21 0 237 186 72 41 chr5 23559461 23559558 -179525974 + Charlie1 DNA MER1_type 2575 2674 -87 34 65 0 0 chr5 23559805 23559867 -179525665 + AT_rich Low_complexity Low_complexity 1 62 0 574 186 0 0 chr5 23559867 23559969 -179525563 - FLAM_A SINE Alu -23 119 18 237 255 0 0 chr5 23560054 23560105 -179525427 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 524 305 68 39 chr5 23560247 23560639 -179524893 + L1MC/D LINE L1 5258 5664 -747 5352 168 46 7 chr5 23561044 23562102 -179523430 + L1MA4 LINE L1 5196 6289 -11 29 0 0 0 chr5 23562102 23562131 -179523401 + AT_rich Low_complexity Low_complexity 1 29 0 231 368 9 9 chr5 23563492 23563606 -179521926 - MIR3 SINE MIR -6 202 89 2073 84 0 11 chr5 23564082 23564410 -179521122 - AluY SINE Alu 0 325 1 260 253 27 0 chr5 23564514 23564589 -179520943 - MER67D LTR ERV1 -4 510 434 * 781 284 125 17 chr5 23564563 23564915 -179520617 - MER31B LTR ERV1 -76 390 1 227 167 24 0 chr5 23565029 23565071 -179520461 - MLT1J LTR MaLR -336 175 133 472 232 146 40 chr5 23565544 23565846 -179519686 - MER69 DNA AcHobo -6 2520 2187 228 214 36 24 chr5 23565905 23565989 -179519543 - MER69 DNA AcHobo -449 2077 1993 * 439 293 38 0 chr5 23565975 23566108 -179519424 - MER69 DNA AcHobo -1861 665 528 2223 90 0 13 chr5 23566172 23566473 -179519059 - AluY SINE Alu -14 297 1 18263 29 3 0 chr5 23566589 23568856 -179516676 - L1P1 LINE L1 -680 5475 3203 932 152 91 0 chr5 23568856 23569021 -179516511 - THE1B LTR MaLR -183 181 2 408 125 0 0 chr5 23569251 23569315 -179516217 + (TA)n Simple_repeat Simple_repeat 2 65 0 228 152 0 0 chr5 23569315 23569361 -179516171 - LTR66 LTR ERVL -171 439 394 185 217 12 0 chr5 23569361 23569444 -179516088 + (TA)n Simple_repeat Simple_repeat 2 85 0 21 71 0 0 chr5 23569909 23569951 -179515581 + AT_rich Low_complexity Low_complexity 1 42 0 30 27 0 0 chr5 23570238 23570275 -179515257 + AT_rich Low_complexity Low_complexity 1 37 0 241 220 170 64 chr5 23572465 23572606 -179512926 - MLT1J1 LTR MaLR -22 424 269 256 257 14 0 chr5 23572998 23573068 -179512464 + MIR SINE MIR 89 159 -103 2208 115 0 0 chr5 23573514 23573818 -179511714 - AluSx SINE Alu -6 306 3 1643 267 83 20 chr5 23575329 23575835 -179509697 - MLT1E LTR MaLR -30 563 26 836 281 32 5 chr5 23576758 23576979 -179508553 + MER45R DNA AcHobo 1 227 -1354 250 154 0 0 chr5 23577054 23577093 -179508439 + AluJ/FLAM SINE Alu 20 58 -244 343 342 40 7 chr5 23577299 23577448 -179508084 + LTR33 LTR ERVL 12 165 -356 233 224 106 75 chr5 23577515 23577676 -179507856 + LTR33 LTR ERVL 304 469 -52 300 200 0 0 chr5 23578130 23578200 -179507332 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 255 272 0 22 chr5 23578202 23578294 -179507238 + L1MC4 LINE L1 6614 6703 -1339 492 146 0 0 chr5 23578301 23578390 -179507142 + (TATG)n Simple_repeat Simple_repeat 4 92 0 225 0 0 0 chr5 23578394 23578419 -179507113 + (CA)n Simple_repeat Simple_repeat 2 26 0 1413 179 10 34 chr5 23578423 23578720 -179506812 - AluJo SINE Alu -10 302 13 30 27 0 0 chr5 23579709 23579746 -179505786 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 23579877 23579900 -179505632 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 23580106 23580144 -179505388 + AT_rich Low_complexity Low_complexity 1 38 0 1854 128 19 29 chr5 23580419 23580731 -179504801 + AluSc SINE Alu 1 309 0 3092 144 55 48 chr5 23581236 23581834 -179503698 + MER7C DNA MER2_type 1 602 0 6897 58 4 14 chr5 23582221 23582674 -179502858 + L1PA7 LINE L1 5020 5476 -678 2636 23 0 7 chr5 23582674 23582978 -179502554 + AluY SINE Alu 1 302 -9 6897 58 4 14 chr5 23582978 23583667 -179501865 + L1PA7 LINE L1 5476 6153 -1 459 312 15 7 chr5 23584169 23584339 -179501193 - L1MC/D LINE L1 -528 5638 5486 1570 209 42 35 chr5 23584516 23584917 -179500615 + MLT2C2 LTR ERVL 1 404 -60 1127 246 88 33 chr5 23585433 23585831 -179499701 - LTR52 LTR ERVL 0 421 2 402 294 47 58 chr5 23586561 23586836 -179498696 + L1MEd LINE L1 495 766 -5353 2482 50 3 0 chr5 23586907 23587206 -179498326 + AluY SINE Alu 1 300 -11 225 0 0 0 chr5 23587638 23587663 -179497869 + (TA)n Simple_repeat Simple_repeat 1 25 0 4167 183 32 15 chr5 23588045 23588920 -179496612 + L1MC1 LINE L1 5444 6333 0 210 256 37 0 chr5 23589461 23589543 -179495989 + (TATG)n Simple_repeat Simple_repeat 4 88 0 1407 214 0 11 chr5 23590156 23590465 -179495067 - AluJb SINE Alu 0 309 4 268 144 72 41 chr5 23590764 23590861 -179494671 - Charlie1 DNA MER1_type -87 2674 2575 21 0 0 0 chr5 23590892 23590913 -179494619 + AT_rich Low_complexity Low_complexity 1 21 0 307 290 160 8 chr5 23591357 23591488 -179494044 - MIR SINE MIR -39 223 73 21 0 0 0 chr5 23591742 23591763 -179493769 + AT_rich Low_complexity Low_complexity 1 21 0 1639 172 44 52 chr5 23591885 23592251 -179493281 - MLT1A1 LTR MaLR -2 363 1 2702 10 0 10 chr5 23592479 23592793 -179492739 + AluYa5 SINE Alu 1 311 0 2933 159 29 4 chr5 23592794 23593347 -179492185 + L1MA6 LINE L1 5333 5899 -401 234 75 100 0 chr5 23593518 23593558 -179491974 + L1MA6 LINE L1 5908 5951 -349 361 189 22 0 chr5 23593709 23593799 -179491733 + (TA)n Simple_repeat Simple_repeat 2 93 0 197 62 0 31 chr5 23594334 23594366 -179491166 + (TA)n Simple_repeat Simple_repeat 1 31 0 1104 215 18 0 chr5 23594373 23594596 -179490936 - MLT1D LTR MaLR -253 252 26 642 370 95 7 chr5 23595891 23596343 -179489189 + L3 LINE CR1 665 1156 -421 2168 109 0 3 chr5 23596913 23597215 -179488317 + AluSq SINE Alu 2 302 -11 1773 160 41 39 chr5 23597361 23597724 -179487808 + THE1B LTR MaLR 1 364 0 27 62 0 0 chr5 23598635 23598683 -179486849 + AT_rich Low_complexity Low_complexity 1 48 0 240 266 37 83 chr5 23598701 23598810 -179486722 + L3 LINE CR1 1242 1345 -232 32 57 0 0 chr5 23599426 23599479 -179486053 + AT_rich Low_complexity Low_complexity 1 53 0 241 270 0 0 chr5 23600101 23600164 -179485368 + T-rich Low_complexity Low_complexity 1 63 0 277 217 46 23 chr5 23600560 23600735 -179484797 + (TA)n Simple_repeat Simple_repeat 2 180 0 32 43 0 0 chr5 23600756 23600802 -179484730 + AT_rich Low_complexity Low_complexity 1 46 0 731 276 151 23 chr5 23601272 23601640 -179483892 + MLT1F1 LTR MaLR 39 452 -115 48 32 0 0 chr5 23601673 23601735 -179483797 + AT_rich Low_complexity Low_complexity 1 62 0 252 258 0 15 chr5 23601738 23601804 -179483728 + MLT1F1 LTR MaLR 478 542 0 280 306 0 0 chr5 23602014 23602099 -179483433 + (AATAG)n Simple_repeat Simple_repeat 4 88 0 257 0 30 0 chr5 23602145 23602178 -179483354 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 23602283 23602304 -179483228 + AT_rich Low_complexity Low_complexity 1 21 0 1855 131 0 4 chr5 23602330 23602597 -179482935 + AluSq SINE Alu 46 311 -2 414 294 36 31 chr5 23602669 23602968 -179482564 - MER68 LTR ERV1 -199 363 1 3072 132 7 0 chr5 23602996 23603460 -179482072 - L1PA13 LINE L1 -177 5986 5520 1695 195 7 0 chr5 23603487 23603790 -179481742 + AluJb SINE Alu 1 305 -7 275 269 112 30 chr5 23604367 23604564 -179480968 + MER113 DNA MER1_type? 67 279 -242 1824 160 55 25 chr5 23606693 23607055 -179478477 - THE1C LTR MaLR -2 373 1 2346 131 15 32 chr5 23607055 23607459 -179478073 - THE1C-int LTR MaLR 0 1580 1184 339 218 0 0 chr5 23608530 23608584 -179476948 - AluJ/FRAM SINE Alu -20 282 229 1287 80 0 0 chr5 23608584 23608746 -179476786 + THE1C LTR MaLR 1 162 -213 1442 194 3 41 chr5 23609153 23609207 -179476325 - AluJo SINE Alu -30 282 228 2303 134 5 18 chr5 23609207 23609587 -179475945 + THE1C LTR MaLR 1 375 0 1442 194 3 41 chr5 23609587 23609825 -179475707 - AluJo SINE Alu -84 228 1 1812 179 32 16 chr5 23610051 23610420 -179475112 - THE1C LTR MaLR 0 375 1 198 0 0 0 chr5 23610832 23610854 -179474678 + (TAAAAA)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr5 23611162 23611197 -179474335 + AT_rich Low_complexity Low_complexity 1 35 0 1858 135 32 0 chr5 23611824 23612105 -179473427 + AluSx SINE Alu 1 290 -22 255 133 0 0 chr5 23612289 23612334 -179473198 + (CA)n Simple_repeat Simple_repeat 2 46 0 205 161 0 0 chr5 23613480 23613511 -179472021 + (CA)n Simple_repeat Simple_repeat 2 32 0 2632 82 3 3 chr5 23613801 23614156 -179471376 - THE1A LTR MaLR 0 355 1 21 0 0 0 chr5 23614180 23614201 -179471331 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 23614408 23614431 -179471101 + AT_rich Low_complexity Low_complexity 1 23 0 297 206 31 21 chr5 23614817 23614914 -179470618 + (TA)n Simple_repeat Simple_repeat 1 98 0 5241 174 25 8 chr5 23614938 23615141 -179470391 - L1PA16 LINE L1 -14 6152 5954 1970 116 65 34 chr5 23615141 23615494 -179470038 - THE1B LTR MaLR 0 364 1 5241 174 25 8 chr5 23615494 23617041 -179468491 - L1PA16 LINE L1 -212 5954 4375 492 306 71 37 chr5 23618217 23618485 -179467047 + L2 LINE L2 2873 3149 -164 498 278 32 0 chr5 23618633 23618759 -179466773 - MLT2D LTR ERVL -48 366 237 21 0 0 0 chr5 23618968 23618989 -179466543 + AT_rich Low_complexity Low_complexity 1 21 0 301 235 15 0 chr5 23619047 23619115 -179466417 + MIR3 SINE MIR 121 189 -19 364 237 80 27 chr5 23619191 23619316 -179466216 - MER90 LTR ERV1 0 614 445 2114 180 42 75 chr5 23620878 23621450 -179464082 - MLT2B3 LTR ERVL 0 554 2 189 263 26 66 chr5 23622111 23622187 -179463345 + L2 LINE L2 3193 3265 -7 24 0 0 0 chr5 23622694 23622718 -179462814 + AT_rich Low_complexity Low_complexity 1 24 0 1669 196 27 9 chr5 23623583 23623919 -179461613 + MER2 DNA MER2_type 3 344 0 345 293 104 21 chr5 23624041 23624635 -179460897 - L1ME2 LINE L1 -258 5906 5265 1499 242 35 12 chr5 23625617 23626047 -179459485 - L1MC4 LINE L1 -396 7646 7207 211 216 0 0 chr5 23626067 23626118 -179459414 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 402 288 133 51 chr5 23626133 23626449 -179459083 + L1MC4 LINE L1 7695 8036 -6 545 277 66 51 chr5 23627450 23627724 -179457808 - MER110 LTR ERV1 -48 443 166 228 244 13 39 chr5 23627801 23627879 -179457653 - MER110A LTR ERV1 -298 170 95 249 57 0 0 chr5 23628572 23628607 -179456925 + (TG)n Simple_repeat Simple_repeat 2 36 0 2302 110 0 0 chr5 23629829 23630139 -179455393 - AluSg SINE Alu 0 310 1 355 309 41 0 chr5 23630154 23630251 -179455281 - L2 LINE L2 -14 3299 3199 359 279 12 0 chr5 23630330 23630416 -179455116 - MER110 LTR ERV1 0 491 405 2058 181 38 20 chr5 23630416 23630815 -179454717 + MLT2D LTR ERVL 1 406 -8 848 289 63 38 chr5 23630819 23631213 -179454319 - MER110 LTR ERV1 -83 408 5 2264 95 0 0 chr5 23633563 23633857 -179451675 - AluSg1 SINE Alu -15 294 1 240 264 46 46 chr5 23634309 23634396 -179451136 - L2 LINE L2 -1 3312 3226 258 105 0 0 chr5 23634400 23634438 -179451094 + (T)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr5 23634566 23634588 -179450944 + AT_rich Low_complexity Low_complexity 1 22 0 387 245 108 22 chr5 23636511 23636650 -179448882 + L3b LINE CR1 1224 1374 -209 211 194 0 0 chr5 23636795 23636831 -179448701 + (TATG)n Simple_repeat Simple_repeat 4 39 0 632 301 79 86 chr5 23636879 23637085 -179448447 + L2 LINE L2 2615 2821 -492 1513 70 10 10 chr5 23637085 23637285 -179448247 - AluY SINE Alu -13 298 99 632 301 79 86 chr5 23637285 23637664 -179447868 + L2 LINE L2 2821 3199 -114 2590 26 0 10 chr5 23637664 23637977 -179447555 + AluYa5 SINE Alu 2 311 0 632 301 79 86 chr5 23637977 23638058 -179447474 + L2 LINE L2 3199 3279 -34 7242 45 0 6 chr5 23638791 23639725 -179445807 + L1PA4 LINE L1 5226 6154 -1 1049 118 59 38 chr5 23639726 23639912 -179445620 + THE1B LTR MaLR 175 364 0 1814 145 75 28 chr5 23639917 23640275 -179445257 + THE1C LTR MaLR 1 375 0 428 267 68 23 chr5 23640358 23640606 -179444926 + L1MDa LINE L1 1816 2044 -857 24 53 0 0 chr5 23640776 23640814 -179444718 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 23641031 23641054 -179444478 + AT_rich Low_complexity Low_complexity 1 23 0 723 288 53 109 chr5 23641435 23642372 -179443160 - L2 LINE L2 0 3313 2419 1882 144 47 39 chr5 23642384 23642745 -179442787 + THE1B LTR MaLR 1 364 0 6283 102 15 91 chr5 23642745 23643861 -179441671 + THE1B-int LTR MaLR 1 1031 -549 201 323 0 0 chr5 23643882 23643944 -179441588 - MIR SINE MIR -181 81 20 26 30 0 0 chr5 23644283 23644316 -179441216 + AT_rich Low_complexity Low_complexity 1 33 0 210 345 99 35 chr5 23644614 23644846 -179440686 + L3 LINE CR1 483 729 -848 259 356 51 8 chr5 23645475 23645593 -179439939 + MIR SINE MIR 4 126 -136 22 0 0 0 chr5 23646817 23646839 -179438693 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 23647077 23647113 -179438419 + AT_rich Low_complexity Low_complexity 1 36 0 372 22 0 0 chr5 23647677 23647722 -179437810 + (TG)n Simple_repeat Simple_repeat 2 46 0 1991 108 0 24 chr5 23647940 23648236 -179437296 + AluSg1 SINE Alu 1 289 -20 479 322 74 17 chr5 23648431 23648661 -179436871 + MIR SINE MIR 19 261 -1 22 0 0 0 chr5 23649249 23649271 -179436261 + AT_rich Low_complexity Low_complexity 1 22 0 199 186 0 43 chr5 23651142 23651212 -179434320 + A-rich Low_complexity Low_complexity 2 68 0 2171 118 0 22 chr5 23652523 23652862 -179432670 - AluSg SINE Alu 0 332 1 1559 152 57 30 chr5 23653473 23653769 -179431763 + AluJo SINE Alu 4 307 -5 1694 298 24 26 chr5 23654362 23654979 -179430553 + MLT2E LTR ERVL 11 626 -2 369 58 0 0 chr5 23655090 23655142 -179430390 + (TG)n Simple_repeat Simple_repeat 2 53 0 1716 164 11 14 chr5 23655143 23655430 -179430102 - AluSx SINE Alu -26 286 1 1810 118 16 26 chr5 23655806 23656111 -179429421 - AluSq SINE Alu -11 302 1 2084 99 13 16 chr5 23656730 23657033 -179428499 - AluSq SINE Alu -11 302 1 1774 148 0 14 chr5 23657487 23657784 -179427748 - AluSc SINE Alu 0 309 17 206 86 71 57 chr5 23657873 23657943 -179427589 + (TA)n Simple_repeat Simple_repeat 1 71 0 2096 292 129 20 chr5 23657951 23659153 -179426379 - L2 LINE L2 -13 3300 1967 312 27 0 0 chr5 23660992 23661029 -179424503 + (TG)n Simple_repeat Simple_repeat 1 37 0 181 152 22 65 chr5 23662840 23662886 -179422646 - L2 LINE L2 0 3272 3229 209 373 32 32 chr5 23662962 23663088 -179422444 - L2 LINE L2 -193 3120 2995 876 308 36 98 chr5 23663251 23663917 -179421615 - L2 LINE L2 -650 2664 2040 233 288 27 0 chr5 23663993 23664066 -179421466 - L1MC/D LINE L1 -2211 5597 5523 21 36 0 0 chr5 23665073 23665101 -179420431 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 23665610 23665638 -179419894 + AT_rich Low_complexity Low_complexity 1 28 0 1163 116 12 0 chr5 23665786 23665959 -179419573 - AluSg/x SINE Alu 0 312 138 535 339 117 31 chr5 23666450 23666896 -179418636 - L1MEc LINE L1 -721 1855 1325 22 56 0 0 chr5 23669725 23669761 -179415771 + AT_rich Low_complexity Low_complexity 1 36 0 819 251 16 11 chr5 23672814 23672997 -179412535 + MER5A DNA MER1_type 6 189 0 767 227 92 19 chr5 23673006 23673213 -179412319 + MER58A DNA MER1_type 2 223 -1 464 267 42 36 chr5 23673512 23673677 -179411855 + MLT1I LTR MaLR 244 409 0 200 284 102 0 chr5 23673906 23673994 -179411538 - L2 LINE L2 -559 2755 2659 255 281 0 0 chr5 23674445 23674509 -179411023 - MLT1I LTR MaLR -242 167 104 227 240 104 10 chr5 23674966 23675062 -179410470 - LTR16C LTR ERVL -133 358 254 1854 171 3 0 chr5 23675377 23675686 -179409846 + AluSx SINE Alu 1 310 -2 235 324 139 0 chr5 23675929 23676037 -179409495 - MIR SINE MIR -14 248 126 184 148 11 227 chr5 23676726 23676789 -179408743 - MIR SINE MIR -57 151 110 2251 103 0 3 chr5 23676789 23677089 -179408443 + AluSx SINE Alu 5 303 -9 184 148 11 227 chr5 23677089 23677113 -179408419 - MIR SINE MIR -98 110 83 356 157 68 20 chr5 23677591 23677738 -179407794 + (TA)n Simple_repeat Simple_repeat 2 155 0 21 0 0 0 chr5 23677738 23677759 -179407773 + AT_rich Low_complexity Low_complexity 1 21 0 224 339 68 31 chr5 23679573 23679765 -179405767 + L3 LINE CR1 845 1043 -534 353 326 54 0 chr5 23679794 23679923 -179405609 + L3 LINE CR1 1211 1346 -231 266 127 0 48 chr5 23680007 23680070 -179405462 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 2347 241 92 23 chr5 23680236 23681474 -179404058 - L1ME1 LINE L1 -6 6160 4850 202 262 49 0 chr5 23682421 23682482 -179403050 + A-rich Low_complexity Low_complexity 2 65 0 286 297 0 33 chr5 23682741 23682832 -179402700 + MLT1H LTR MaLR 455 542 -7 2050 129 0 3 chr5 23683090 23683393 -179402139 - AluSq SINE Alu -11 302 1 362 345 100 31 chr5 23687256 23687575 -179397957 + L3 LINE CR1 318 658 -919 780 332 18 25 chr5 23688916 23689193 -179396339 + LTR16A LTR ERVL 167 441 -9 345 47 0 0 chr5 23689213 23689256 -179396276 + (CA)n Simple_repeat Simple_repeat 2 44 0 312 314 139 25 chr5 23689666 23689911 -179395621 - MLT1J1 LTR MaLR -173 273 1 663 195 12 41 chr5 23690503 23690672 -179394860 - L1MB2 LINE L1 -17 6154 5991 2148 74 19 42 chr5 23691091 23691400 -179394132 - AluY SINE Alu -3 308 7 764 253 82 17 chr5 23691579 23691884 -179393648 - MSTD LTR MaLR -27 368 1 2311 86 0 13 chr5 23692037 23692338 -179393194 + AluY SINE Alu 1 297 -14 430 293 38 0 chr5 23692402 23692535 -179392997 + MER69 DNA AcHobo 528 665 -1861 444 212 119 38 chr5 23692664 23692966 -179392566 + MER69 DNA AcHobo 2187 2520 -6 232 368 9 9 chr5 23693538 23693652 -179391880 + MIR3 SINE MIR 89 202 -6 29 0 0 0 chr5 23695011 23695040 -179390492 + AT_rich Low_complexity Low_complexity 1 29 0 5297 168 46 7 chr5 23695040 23696098 -179389434 - L1MA4 LINE L1 -11 6289 5196 517 308 71 41 chr5 23696503 23696895 -179388637 - L1MB2 LINE L1 -747 5612 5258 237 255 0 0 chr5 23697037 23697088 -179388444 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 586 186 0 0 chr5 23697173 23697275 -179388257 + FLAM_A SINE Alu 18 119 -23 34 65 0 0 chr5 23697275 23697337 -179388195 + AT_rich Low_complexity Low_complexity 1 62 0 385 292 111 68 chr5 23697393 23697415 -179388117 - L1MB2 LINE L1 -1724 4422 4402 2226 122 0 0 chr5 23697415 23697719 -179387813 + AluSx SINE Alu 1 304 -8 385 292 111 68 chr5 23697719 23698298 -179387234 - L1MB2 LINE L1 -1744 4402 3795 4356 128 26 12 chr5 23698463 23699712 -179385820 + HERV9 LTR ERV1 5832 7121 -1278 2209 114 7 0 chr5 23700401 23700707 -179384825 - AluSx SINE Alu -4 308 1 429 20 0 0 chr5 23701004 23701054 -179384478 + (CA)n Simple_repeat Simple_repeat 1 50 0 243 331 38 11 chr5 23701774 23701958 -179383574 - MARNA DNA Mariner -197 389 201 23 0 0 0 chr5 23702084 23702107 -179383425 + AT_rich Low_complexity Low_complexity 1 23 0 771 261 41 15 chr5 23702173 23702368 -179383164 + MER58A DNA MER1_type 23 222 -2 239 173 19 0 chr5 23702775 23702827 -179382705 + (TA)n Simple_repeat Simple_repeat 2 54 0 710 250 29 0 chr5 23703199 23703371 -179382161 - MER45A DNA AcHobo -1 177 1 230 323 39 24 chr5 23703450 23703577 -179381955 - MIR SINE MIR -10 252 124 259 350 92 48 chr5 23703802 23704139 -179381393 - L2 LINE L2 -33 3280 2929 673 347 85 58 chr5 23704191 23705006 -179380526 - L2 LINE L2 -462 2852 2016 410 343 62 0 chr5 23706613 23706759 -179378773 - MIR SINE MIR -71 191 37 2397 85 0 0 chr5 23707538 23707833 -179377699 - AluSg SINE Alu -15 295 1 345 303 174 13 chr5 23708354 23708509 -179377023 + MER5A DNA MER1_type 9 188 -1 324 308 74 52 chr5 23709411 23709736 -179375796 + L1M4 LINE L1 2894 3225 -2921 1907 124 0 11 chr5 23709758 23710040 -179375492 + AluSx SINE Alu 1 279 -33 480 35 0 0 chr5 23710040 23710098 -179375434 + (CA)n Simple_repeat Simple_repeat 1 58 0 407 132 0 3 chr5 23710437 23710509 -179375023 - MLT1B-int LTR MaLR -1570 81 11 1057 230 50 66 chr5 23710541 23710937 -179374595 - MLT1B LTR MaLR 0 390 1 4297 240 25 68 chr5 23710967 23712128 -179373404 - MLT1A2-int LTR MaLR -32 1339 247 829 90 53 0 chr5 23712128 23712261 -179373271 - L1PA12 LINE L1 -1 6167 6028 4297 240 25 68 chr5 23712261 23712498 -179373034 - MLT1A2-int LTR MaLR -1124 247 1 1157 239 99 18 chr5 23712511 23712845 -179372687 - MLT1A2 LTR MaLR -13 361 1 883 122 6 58 chr5 23713300 23713456 -179372076 + Charlie3 DNA MER1_type 2559 2706 -4 559 281 69 10 chr5 23713475 23713678 -179371854 - LTR16A LTR ERVL -235 215 1 2394 169 39 14 chr5 23713727 23713832 -179371700 - L1MA7 LINE L1 -4 6287 6186 2533 122 3 11 chr5 23713832 23714210 -179371322 + THE1C LTR MaLR 1 375 0 2394 169 39 14 chr5 23714210 23714612 -179370920 - L1MA7 LINE L1 -105 6186 5767 945 188 16 26 chr5 23714612 23714804 -179370728 + L1MA7 LINE L1 5567 5756 -535 317 371 60 38 chr5 23715291 23715822 -179369710 - ERVL LTR ERVL -808 4956 4414 868 320 22 30 chr5 23716470 23716833 -179368699 - LTR16A LTR ERVL -2 448 89 2306 77 0 3 chr5 23716977 23717277 -179368255 + AluY SINE Alu 1 299 -12 22 0 0 0 chr5 23717574 23717596 -179367936 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 23718474 23718494 -179367038 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2174 124 0 3 chr5 23718897 23719203 -179366329 + AluSx SINE Alu 6 310 -2 218 103 0 26 chr5 23719214 23719253 -179366279 + (GAAAA)n Simple_repeat Simple_repeat 5 42 0 251 264 32 13 chr5 23719642 23719797 -179365735 + (TA)n Simple_repeat Simple_repeat 2 159 0 1317 219 66 80 chr5 23719810 23720254 -179365278 + MLT2B1 LTR ERVL 1 419 -45 444 82 0 0 chr5 23720254 23720315 -179365217 + (TA)n Simple_repeat Simple_repeat 2 62 0 1317 219 66 80 chr5 23720315 23720361 -179365171 + MLT2B1 LTR ERVL 419 464 0 254 247 0 35 chr5 23720962 23721047 -179364485 - L1ME LINE L1 -477 5644 5563 2547 59 0 0 chr5 23721141 23721444 -179364088 + AluY SINE Alu 1 303 -8 537 249 69 29 chr5 23721817 23721990 -179363542 + MIR SINE MIR 68 247 -15 41 0 0 0 chr5 23722004 23722045 -179363487 + AT_rich Low_complexity Low_complexity 1 41 0 3700 119 9 0 chr5 23722365 23722927 -179362605 + L1PA13 LINE L1 5597 6163 0 1129 177 109 53 chr5 23724335 23724618 -179360914 + AluJo SINE Alu 1 299 -3 279 365 119 25 chr5 23727211 23727496 -179358036 - L2 LINE L2 -436 2878 2567 201 39 0 0 chr5 23730342 23730368 -179355164 + (CAA)n Simple_repeat Simple_repeat 2 27 0 237 33 0 0 chr5 23732133 23732163 -179353369 + (TTTAG)n Simple_repeat Simple_repeat 3 32 0 2473 61 0 0 chr5 23732305 23732602 -179352930 + AluY SINE Alu 1 297 -14 1517 196 13 64 chr5 23732722 23733099 -179352433 - L1MB8 LINE L1 -258 5920 5563 6100 200 112 26 chr5 23733099 23734644 -179350888 - MER52A LTR ERV1 0 1755 1 844 230 71 97 chr5 23734647 23736721 -179348811 - L1MB8 LINE L1 -621 5563 3459 2603 97 33 3 chr5 23736721 23737111 -179348421 + L1PA13 LINE L1 5756 6157 -6 844 230 71 97 chr5 23737111 23737818 -179347714 - L1MB8 LINE L1 -2725 3459 2735 876 206 53 123 chr5 23737825 23738184 -179347348 - MLT1A1 LTR MaLR -24 341 8 260 237 0 0 chr5 23738199 23738258 -179347274 - L1MB8 LINE L1 -3424 2722 2664 1533 194 52 52 chr5 23739556 23739943 -179345589 - MLT1B LTR MaLR 0 390 4 487 200 33 0 chr5 23740677 23740767 -179344765 - MER7A DNA MER2_type -253 93 3 1118 190 5 14 chr5 23741128 23741339 -179344193 - AluJo SINE Alu 0 312 104 896 139 0 22 chr5 23741339 23741476 -179344056 - FLAM_C SINE Alu -3 140 7 22 0 0 0 chr5 23741518 23741540 -179343992 + AT_rich Low_complexity Low_complexity 1 22 0 705 282 100 38 chr5 23742214 23742554 -179342978 + L3 LINE CR1 1201 1561 -16 191 377 65 29 chr5 23742903 23743041 -179342491 + L2 LINE L2 3171 3313 0 26 0 0 0 chr5 23743835 23743861 -179341671 + AT_rich Low_complexity Low_complexity 1 26 0 265 319 88 35 chr5 23745657 23745999 -179339533 + HAL1 LINE L1 1197 1556 -951 599 250 12 6 chr5 23746615 23746783 -179338749 - MER3 DNA MER1_type -87 122 1 25 31 0 0 chr5 23746800 23746832 -179338700 + AT_rich Low_complexity Low_complexity 1 32 0 1073 201 91 77 chr5 23746855 23747218 -179338314 - MLT1A2 LTR MaLR -4 370 3 2216 118 0 0 chr5 23749196 23749500 -179336032 + AluSx SINE Alu 1 304 -8 2110 126 49 20 chr5 23750556 23750906 -179334626 - THE1B LTR MaLR -4 360 1 321 346 15 8 chr5 23751068 23751201 -179334331 + MIR SINE MIR 1 134 -128 248 109 0 22 chr5 23751208 23751254 -179334278 + (CAT)n Simple_repeat Simple_repeat 2 46 0 237 219 0 0 chr5 23751777 23751850 -179333682 + (CAT)n Simple_repeat Simple_repeat 3 75 0 4442 134 6 6 chr5 23752175 23752873 -179332659 - L1P LINE L1 -1754 4392 3694 276 30 0 0 chr5 23752873 23752906 -179332626 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6070 76 32 8 chr5 23752919 23754472 -179331060 + L1PA8A LINE L1 4553 6125 -6 22 0 0 0 chr5 23754816 23754838 -179330694 + AT_rich Low_complexity Low_complexity 1 22 0 712 223 121 64 chr5 23755687 23756091 -179329441 - MSTC LTR MaLR 0 428 2 237 338 58 22 chr5 23756092 23756231 -179329301 + L2 LINE L2 2213 2356 -958 2495 124 6 3 chr5 23756232 23756595 -179328937 - THE1B LTR MaLR 0 364 1 240 122 0 0 chr5 23756673 23756714 -179328818 + (CA)n Simple_repeat Simple_repeat 2 42 0 361 366 52 6 chr5 23756781 23756953 -179328579 + L2 LINE L2 2525 2704 -610 22 56 0 0 chr5 23757053 23757089 -179328443 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 23757196 23757224 -179328308 + AT_rich Low_complexity Low_complexity 1 28 0 227 333 0 12 chr5 23757440 23757521 -179328011 + L2 LINE L2 3234 3313 0 194 296 0 0 chr5 23757502 23757556 -179327976 - L2 LINE L2 -803 2511 2458 * 207 0 0 0 chr5 23757969 23757992 -179327540 + (ATG)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 23759494 23759516 -179326016 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 23760662 23760684 -179324848 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 23760769 23760793 -179324739 + AT_rich Low_complexity Low_complexity 1 24 0 1914 158 3 0 chr5 23760883 23761193 -179324339 - AluSx SINE Alu -1 311 1 1646 211 118 10 chr5 23761844 23762260 -179323272 - LOR1b LTR ERV1 0 461 1 31 58 0 0 chr5 23762370 23762422 -179323110 + AT_rich Low_complexity Low_complexity 1 52 0 2514 180 20 14 chr5 23762581 23763091 -179322441 + LTR10D LTR ERV1 1 513 0 306 259 103 9 chr5 23763112 23763228 -179322304 + MIR SINE MIR 47 173 -89 789 250 116 16 chr5 23763279 23763591 -179321941 + MER57B LTR ERV1 3 369 -65 259 170 0 21 chr5 23763600 23763647 -179321885 + LTR12 LTR ERV1 54 99 -615 * 33505 108 27 8 chr5 23763645 23768591 -179316941 + HERV9 LTR ERV1 3357 8399 0 266 211 0 0 chr5 23768591 23768643 -179316889 + LTR30 LTR ERV1 1 52 -670 757 176 94 28 chr5 23768643 23768900 -179316632 + LTR12 LTR ERV1 55 274 -440 308 206 38 57 chr5 23768904 23769010 -179316522 + LTR30 LTR ERV1 375 475 -94 663 138 0 0 chr5 23769010 23769104 -179316428 + LTR12 LTR ERV1 489 582 -132 1976 171 6 9 chr5 23769110 23769454 -179316078 + MER21A LTR ERV1 589 931 0 232 299 100 53 chr5 23769567 23769868 -179315664 - L1M4 LINE L1 -1979 4167 3853 1343 91 25 0 chr5 23769912 23770109 -179315423 - HERV9 LTR ERV1 -26 8373 8172 431 300 68 34 chr5 23770109 23770346 -179315186 + L1M4 LINE L1 16 260 -6282 2336 97 0 3 chr5 23770352 23770663 -179314869 + AluSx SINE Alu 3 312 0 845 111 0 0 chr5 23771079 23771196 -179314336 - AluY SINE Alu -43 268 152 365 256 16 16 chr5 23772050 23772171 -179313361 - Looper DNA T2_type -8 1550 1430 1103 233 17 10 chr5 23772189 23772477 -179313055 - Looper DNA T2_type -598 960 671 23 54 0 0 chr5 23772477 23772514 -179313018 + AT_rich Low_complexity Low_complexity 1 37 0 556 292 78 10 chr5 23772528 23772720 -179312812 - MER3 DNA MER1_type 0 209 5 648 248 31 0 chr5 23772728 23772889 -179312643 - Looper DNA T2_type -893 665 500 221 176 0 59 chr5 23773151 23773219 -179312313 + GA-rich Low_complexity Low_complexity 1 64 0 413 133 36 24 chr5 23773345 23773428 -179312104 - MLT1D LTR MaLR 0 505 422 2150 238 72 65 chr5 23773428 23773782 -179311750 - L1MCb LINE L1 -4881 1026 676 1856 154 24 0 chr5 23773782 23774075 -179311457 + AluSx SINE Alu 1 300 -12 2150 238 72 65 chr5 23774075 23774492 -179311040 - L1MCb LINE L1 -5231 676 264 2099 111 0 0 chr5 23774492 23774808 -179310724 - AluSc SINE Alu 0 316 1 2150 238 72 65 chr5 23774808 23775063 -179310469 - L1MCb LINE L1 -5643 264 12 228 67 0 0 chr5 23775063 23775093 -179310439 + (TA)n Simple_repeat Simple_repeat 1 30 0 228 35 0 0 chr5 23775094 23775123 -179310409 + (GA)n Simple_repeat Simple_repeat 2 30 0 2150 238 72 65 chr5 23775123 23775430 -179310102 - L1MCb LINE L1 -5575 332 29 5755 40 0 19 chr5 23776255 23776989 -179308543 - L1PA3 LINE L1 -3 6152 5433 28 61 0 0 chr5 23777663 23777712 -179307820 + AT_rich Low_complexity Low_complexity 1 49 0 228 94 0 0 chr5 23777912 23777944 -179307588 + U3 snRNA snRNA 1 32 -185 23 68 0 0 chr5 23777970 23778014 -179307518 + AT_rich Low_complexity Low_complexity 1 44 0 451 221 0 16 chr5 23778441 23778563 -179306969 - MER53 DNA DNA 0 189 70 453 222 0 17 chr5 23778599 23778716 -179306816 - MER53 DNA DNA -74 115 1 545 333 75 4 chr5 23778722 23778950 -179306582 + MLT2E LTR ERVL 18 261 -367 417 284 38 49 chr5 23778971 23779154 -179306378 + MLT2E LTR ERVL 386 566 -62 2398 305 50 47 chr5 23779449 23780736 -179304796 + ERVL-E LTR ERVL 4448 5739 -25 243 273 91 11 chr5 23780738 23780826 -179304706 + MLT2E LTR ERVL 11 105 -523 1459 294 83 37 chr5 23781025 23781272 -179304260 + MLT1E LTR MaLR 1 235 -358 2340 185 12 26 chr5 23781272 23781765 -179303767 + MER66B LTR ERV1 1 486 0 1459 294 83 37 chr5 23781765 23782084 -179303448 + MLT1E LTR MaLR 235 593 0 251 236 0 0 chr5 23782084 23782137 -179303395 + MLT2E LTR ERVL 576 628 0 21 0 0 0 chr5 23782461 23782482 -179303050 + AT_rich Low_complexity Low_complexity 1 21 0 246 341 8 32 chr5 23782519 23782642 -179302890 + MER5A DNA MER1_type 38 157 -32 28 0 0 0 chr5 23783089 23783117 -179302415 + AT_rich Low_complexity Low_complexity 1 28 0 255 93 0 0 chr5 23783591 23783634 -179301898 + (TTAG)n Simple_repeat Simple_repeat 2 44 0 1925 130 7 0 chr5 23783634 23783919 -179301613 - AluSx SINE Alu -25 287 1 41 36 0 0 chr5 23784564 23784619 -179300913 + AT_rich Low_complexity Low_complexity 1 55 0 2265 52 0 0 chr5 23784637 23784909 -179300623 - AluY SINE Alu -11 300 29 23 86 0 0 chr5 23785150 23785208 -179300324 + AT_rich Low_complexity Low_complexity 1 58 0 338 214 20 0 chr5 23785678 23785776 -179299756 + (TATG)n Simple_repeat Simple_repeat 4 103 0 212 184 0 0 chr5 23785809 23785847 -179299685 + (TA)n Simple_repeat Simple_repeat 2 39 0 181 353 59 34 chr5 23786060 23786179 -179299353 - L2 LINE L2 -464 2850 2729 23 0 0 0 chr5 23786954 23786977 -179298555 + AT_rich Low_complexity Low_complexity 1 23 0 3879 178 32 11 chr5 23787269 23788088 -179297444 - L1MA8 LINE L1 -3 6288 5453 279 130 0 19 chr5 23788088 23788170 -179297362 + Alu SINE Alu 226 306 0 473 178 14 55 chr5 23788173 23788319 -179297213 - L1MCb LINE L1 -4965 1080 941 431 276 16 8 chr5 23788315 23788438 -179297094 - L1MCb LINE L1 -6267 297 174 * 25 31 0 0 chr5 23788465 23788497 -179297035 + AT_rich Low_complexity Low_complexity 1 32 0 713 279 82 34 chr5 23788614 23789090 -179296442 - L1ME3A LINE L1 -5 6165 5667 340 222 12 0 chr5 23789420 23789501 -179296031 - L1MB4 LINE L1 0 6180 6099 2473 178 28 0 chr5 23789509 23789976 -179295556 - L1MB4 LINE L1 -524 5809 5330 1261 234 39 28 chr5 23789971 23790360 -179295172 + L1M4 LINE L1 4687 5079 -1067 * 337 316 128 45 chr5 23791637 23791925 -179293607 - HAL1 LINE L1 -1386 1121 810 221 308 19 10 chr5 23792865 23792969 -179292563 - MIR SINE MIR -14 248 144 231 149 0 0 chr5 23793779 23793826 -179291706 + LTR66 LTR ERVL 394 440 -170 631 275 47 65 chr5 23793889 23794395 -179291137 + HAL1 LINE L1 828 1324 -1183 279 0 0 0 chr5 23794451 23794482 -179291050 + (CA)n Simple_repeat Simple_repeat 2 32 0 1533 203 36 46 chr5 23794682 23794907 -179290625 - MLT1B LTR MaLR 0 390 169 2193 59 6 86 chr5 23794907 23795244 -179290288 - AluY SINE Alu -1 310 1 1533 203 36 46 chr5 23795244 23795407 -179290125 - MLT1B LTR MaLR -221 169 6 208 208 0 42 chr5 23795431 23795479 -179290053 + (TAAAG)n Simple_repeat Simple_repeat 2 47 0 798 231 71 130 chr5 23795522 23795959 -179289573 + MLT2D LTR ERVL 4 414 0 449 429 49 7 chr5 23795961 23796378 -179289154 - L2 LINE L2 -270 3043 2609 8546 220 16 9 chr5 23797476 23797602 -179287930 - L1PA15 LINE L1 -2 7601 7477 3301 88 5 0 chr5 23797602 23798044 -179287488 - MLT2A1 LTR ERVL 0 444 1 8546 220 16 9 chr5 23798044 23800799 -179284733 - L1PA15 LINE L1 -126 7477 4707 950 251 42 26 chr5 23800805 23800907 -179284625 - L1P LINE L1 -3788 3796 3697 2116 164 14 22 chr5 23800907 23801274 -179284258 + THE1B LTR MaLR 1 364 0 950 251 42 26 chr5 23801274 23801516 -179284016 - L1P LINE L1 -3887 3697 3447 1933 125 45 17 chr5 23801532 23801885 -179283647 - L1PA10 LINE L1 -13 6155 5793 4716 265 51 30 chr5 23802218 23802464 -179283068 - L1PA15 LINE L1 -3896 3688 3448 5752 110 19 4 chr5 23802464 23803474 -179282058 - L1PA10 LINE L1 -13 6155 5136 4716 265 51 30 chr5 23803474 23805801 -179279731 - L1PA15 LINE L1 -4136 3448 1071 1139 306 43 10 chr5 23805824 23806307 -179279225 - L1PA15 LINE L1 -7076 505 7 418 167 0 0 chr5 23806449 23806515 -179279017 + FLAM_A SINE Alu 2 67 -65 2152 110 3 7 chr5 23807039 23807338 -179278194 - AluSg SINE Alu -12 298 1 2306 161 31 10 chr5 23807539 23807955 -179277577 - MSTA LTR MaLR 0 428 4 28 0 0 0 chr5 23808073 23808101 -179277431 + AT_rich Low_complexity Low_complexity 1 28 0 705 258 53 27 chr5 23808298 23808765 -179276767 - L1ME LINE L1 -562 5602 5121 1810 91 91 31 chr5 23809248 23809568 -179275964 + HERVH LTR ERV1 7375 7713 0 997 185 124 79 chr5 23809568 23809962 -179275570 + LTR7 LTR ERV1 1 412 -38 186 208 0 0 chr5 23810471 23810519 -179275013 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 261 284 106 80 chr5 23810839 23811114 -179274418 + LTR33 LTR ERVL 217 498 -23 305 237 10 72 chr5 23811209 23811306 -179274226 - L1MC4 LINE L1 -1337 6705 6615 218 191 0 16 chr5 23811317 23811380 -179274152 + (TA)n Simple_repeat Simple_repeat 1 62 0 21 0 0 0 chr5 23811650 23811671 -179273861 + AT_rich Low_complexity Low_complexity 1 21 0 41 66 0 0 chr5 23811760 23811836 -179273696 + AT_rich Low_complexity Low_complexity 1 76 0 2967 177 49 13 chr5 23811844 23812397 -179273135 - Tigger7 DNA MER2_type -159 574 2 1400 208 40 55 chr5 23812403 23812782 -179272750 - MER67D LTR ERV1 -140 374 2 1715 113 16 0 chr5 23813036 23813284 -179272248 + L1PB1 LINE L1 5540 5791 -360 311 149 75 9 chr5 23813284 23813391 -179272141 + (TA)n Simple_repeat Simple_repeat 1 114 0 2410 126 0 13 chr5 23813394 23813768 -179271764 + L1PB1 LINE L1 5782 6150 -1 1152 242 38 46 chr5 23813981 23814374 -179271158 - MLT1B LTR MaLR 0 390 1 1983 98 10 13 chr5 23815149 23815454 -179270078 - L1PA13 LINE L1 -208 5960 5657 1295 121 5 0 chr5 23815454 23815647 -179269885 + L1PA13 LINE L1 5957 6155 -8 563 208 29 87 chr5 23816350 23816456 -179269076 + MLT1A1 LTR MaLR 170 260 -105 1989 161 31 6 chr5 23816456 23816811 -179268721 + THE1B LTR MaLR 1 364 0 563 208 29 87 chr5 23816811 23816911 -179268621 + MLT1A1 LTR MaLR 260 364 -1 2434 51 0 0 chr5 23818335 23818629 -179266903 - AluY SINE Alu -17 294 1 2057 113 3 10 chr5 23819205 23819506 -179266026 + AluSx SINE Alu 1 299 -13 1474 153 80 0 chr5 23819525 23819787 -179265745 + AluJb SINE Alu 1 283 -29 2077 124 7 0 chr5 23820518 23820808 -179264724 - AluSg SINE Alu -18 292 1 21 57 0 0 chr5 23821852 23821887 -179263645 + AT_rich Low_complexity Low_complexity 1 35 0 1509 202 94 11 chr5 23822079 23822535 -179262997 + LTR54B LTR ERV1 1 494 -4 332 117 0 17 chr5 23822674 23822734 -179262798 + (TCC)n Simple_repeat Simple_repeat 3 61 0 5864 131 40 16 chr5 23822855 23823738 -179261794 + L1MA4A LINE L1 5166 6077 -226 528 92 0 0 chr5 23823738 23823814 -179261718 - MADE1 DNA Mariner -1 79 4 5864 131 40 16 chr5 23823814 23824044 -179261488 + L1MA4A LINE L1 6077 6300 -3 16559 171 63 32 chr5 23825051 23825448 -179260084 + L1MA1 LINE L1 16 399 -7166 253 125 0 0 chr5 23825448 23825488 -179260044 - MADE1 DNA Mariner -14 66 27 16559 171 63 32 chr5 23825488 23828382 -179257150 + L1MA1 LINE L1 399 3449 -4116 259 0 0 197 chr5 23828381 23828442 -179257090 - L1M1 LINE L1 -4466 3099 3051 * 5944 203 32 17 chr5 23828417 23829967 -179255565 - L1 LINE L1 -2497 5068 3478 1050 8 0 0 chr5 23829967 23830086 -179255446 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 5944 203 32 17 chr5 23830086 23830467 -179255065 - L1 LINE L1 -4087 3478 3104 * 6727 186 16 18 chr5 23830465 23831893 -179253639 + L1MA1 LINE L1 5160 6585 -980 3622 140 18 5 chr5 23832437 23833120 -179252412 + L1MA1 LINE L1 6576 7267 -454 760 58 19 0 chr5 23835665 23835769 -179249763 + L1PA7 LINE L1 6048 6153 -1 181 438 10 0 chr5 23835960 23836056 -179249476 + L2 LINE L2 3160 3256 -16 294 169 92 15 chr5 23837801 23837866 -179247666 + Tigger5 DNA MER2_type 10 79 -2244 * 1126 210 25 4 chr5 23837859 23838097 -179247435 + Tigger5 DNA MER2_type 2081 2323 0 253 309 25 0 chr5 23839114 23839195 -179246337 - L2 LINE L2 -4 3268 3186 300 352 27 32 chr5 23839785 23840004 -179245528 - L2 LINE L2 -1 3312 3095 203 378 26 39 chr5 23839983 23840139 -179245393 - L2 LINE L2 -836 2478 2325 * 969 131 0 0 chr5 23841109 23841246 -179244286 + FLAM_C SINE Alu 7 143 0 1158 180 5 14 chr5 23841247 23841458 -179244074 + AluJo SINE Alu 104 312 0 1900 158 48 0 chr5 23841814 23842144 -179243388 + MER7A DNA MER2_type 3 346 0 233 57 29 0 chr5 23842476 23842511 -179243021 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1064 193 80 75 chr5 23843259 23843621 -179241911 + MLT1A1 LTR MaLR 1 364 -1 1654 260 87 49 chr5 23843666 23844346 -179241186 - L1M4 LINE L1 -1062 5084 4360 1333 214 32 21 chr5 23844346 23844631 -179240901 - AluJo SINE Alu -24 288 1 1654 260 87 49 chr5 23844631 23844846 -179240686 - L1M4 LINE L1 -1786 4360 4155 702 276 112 23 chr5 23844869 23845324 -179240208 - L1M4 LINE L1 -2606 3540 3010 2008 136 7 0 chr5 23845324 23845626 -179239906 - AluSc SINE Alu -5 304 1 702 276 112 23 chr5 23845626 23845812 -179239720 - L1M4 LINE L1 -3136 3010 2842 261 249 110 29 chr5 23845912 23846085 -179239447 + L1ME1 LINE L1 1412 1598 -4942 1059 242 68 42 chr5 23846087 23846454 -179239078 + L1ME1 LINE L1 5769 6153 -407 2404 65 3 0 chr5 23846454 23846761 -179238771 + AluY SINE Alu 1 308 -3 1059 242 68 42 chr5 23846761 23846887 -179238645 + L1ME1 LINE L1 6153 6274 -286 354 107 0 0 chr5 23847185 23847241 -179238291 + (TG)n Simple_repeat Simple_repeat 1 56 0 278 245 0 11 chr5 23847253 23847347 -179238185 + CT-rich Low_complexity Low_complexity 4 96 0 932 234 0 5 chr5 23851573 23851787 -179233745 + L1MB5 LINE L1 5950 6162 -12 197 350 98 16 chr5 23851914 23852037 -179233495 + L2 LINE L2 3140 3272 0 213 289 0 0 chr5 23852388 23852440 -179233092 + (TATG)n Simple_repeat Simple_repeat 4 55 0 570 318 53 0 chr5 23852555 23852744 -179232788 + MIR SINE MIR 18 216 -46 225 65 0 0 chr5 23854274 23854305 -179231227 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 275 250 65 82 chr5 23854703 23854749 -179230783 + L1MC5 LINE L1 7122 7167 -794 1890 145 3 38 chr5 23854749 23855067 -179230465 - AluSq SINE Alu -6 307 1 275 250 65 82 chr5 23855067 23855204 -179230328 + L1MC5 LINE L1 7167 7302 -659 918 252 129 90 chr5 23855265 23855722 -179229810 + MLT1C-int LTR MaLR 876 1350 -21 659 251 81 14 chr5 23855777 23856047 -179229485 + MLT1C LTR MaLR 64 415 -52 250 158 0 0 chr5 23856339 23856377 -179229155 + MLT1C LTR MaLR 427 464 -3 267 327 38 25 chr5 23856542 23856701 -179228831 - MIR SINE MIR -49 213 53 1188 222 177 11 chr5 23856923 23857284 -179228248 + MLT1C LTR MaLR 1 421 -46 2113 115 10 22 chr5 23857623 23857937 -179227595 - AluSq SINE Alu -3 310 1 192 364 18 45 chr5 23858435 23858545 -179226987 - L2 LINE L2 -21 3292 3186 557 336 36 40 chr5 23858939 23859213 -179226319 + HERVL40 LTR ERVL 5254 5526 -4 1544 174 4 8 chr5 23859544 23859809 -179225723 - AluJo SINE Alu -48 264 1 299 213 33 0 chr5 23859825 23859886 -179225646 - HERVL40 LTR ERVL -5450 80 18 960 284 29 75 chr5 23859900 23860382 -179225150 - LTR40a LTR ERVL -2 460 1 1735 348 36 18 chr5 23860384 23861317 -179224215 - HERVL40 LTR ERVL -2094 2902 1953 974 310 86 26 chr5 23861586 23862086 -179223446 - HERVL40 LTR ERVL -3419 1577 1048 2521 325 176 29 chr5 23863921 23865068 -179220464 + L2 LINE L2 460 1437 -1877 1981 146 3 0 chr5 23865068 23865369 -179220163 + AluSx SINE Alu 1 302 -10 2521 325 176 29 chr5 23865369 23866205 -179219327 + L2 LINE L2 1437 2734 -580 196 186 23 0 chr5 23866433 23866476 -179219056 + L2 LINE L2 3258 3301 -12 21 57 0 0 chr5 23867057 23867092 -179218440 + AT_rich Low_complexity Low_complexity 1 35 0 675 231 35 35 chr5 23867178 23867377 -179218155 + MER3 DNA MER1_type 10 208 -1 1334 200 79 24 chr5 23868115 23868445 -179217087 + MLT1A1 LTR MaLR 1 348 -17 2092 120 90 0 chr5 23868446 23868780 -179216752 - THE1B LTR MaLR 0 364 1 9229 122 34 47 chr5 23868780 23870382 -179215150 - THE1B-int LTR MaLR 0 1580 1 1989 148 77 3 chr5 23870382 23870721 -179214811 - THE1B LTR MaLR 0 364 1 225 321 0 0 chr5 23871958 23872014 -179213518 + MIR3 SINE MIR 149 204 -4 1591 184 54 64 chr5 23874771 23875163 -179210369 + MLT1B LTR MaLR 1 388 -2 26 0 0 0 chr5 23875239 23875265 -179210267 + AT_rich Low_complexity Low_complexity 1 26 0 227 286 39 0 chr5 23875394 23875471 -179210061 - L1M4 LINE L1 -1998 4148 4069 27 73 0 0 chr5 23875566 23875621 -179209911 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 23876064 23876085 -179209447 + AT_rich Low_complexity Low_complexity 1 21 0 201 108 0 0 chr5 23876414 23876451 -179209081 + (TG)n Simple_repeat Simple_repeat 1 37 0 22 56 0 0 chr5 23876881 23876917 -179208615 + AT_rich Low_complexity Low_complexity 1 36 0 1714 123 43 4 chr5 23877063 23877339 -179208193 - L1PA10 LINE L1 -9 6159 5873 24 0 0 0 chr5 23878177 23878201 -179207331 + AT_rich Low_complexity Low_complexity 1 24 0 216 331 48 30 chr5 23878489 23878655 -179206877 + L2 LINE L2 1936 2104 -1210 23 0 0 0 chr5 23879780 23879803 -179205729 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr5 23880691 23880718 -179204814 + (CA)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 23880762 23880788 -179204744 + AT_rich Low_complexity Low_complexity 1 26 0 1897 112 114 97 chr5 23880923 23881344 -179204188 + MSTA LTR MaLR 1 428 0 35 63 0 0 chr5 23881864 23881927 -179203605 + AT_rich Low_complexity Low_complexity 1 63 0 26 0 0 0 chr5 23882697 23882723 -179202809 + AT_rich Low_complexity Low_complexity 1 26 0 196 225 0 0 chr5 23884315 23884355 -179201177 - MIR3 SINE MIR -17 191 152 396 291 93 7 chr5 23884409 23884560 -179200972 - MER58A DNA MER1_type 0 164 1 189 107 0 0 chr5 23884770 23884798 -179200734 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 234 0 0 0 chr5 23884798 23884824 -179200708 + (T)n Simple_repeat Simple_repeat 1 26 0 604 114 0 0 chr5 23884854 23884942 -179200590 + AluS SINE Alu 1 88 -225 1317 113 5 10 chr5 23887740 23887944 -179197588 - AluSg SINE Alu -107 203 1 453 331 84 0 chr5 23889052 23889351 -179196181 + L1ME3A LINE L1 4959 5282 -864 636 303 108 32 chr5 23889459 23889951 -179195581 + L1ME3A LINE L1 5440 5968 -202 21 0 0 0 chr5 23890149 23890170 -179195362 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 23890388 23890418 -179195114 + AT_rich Low_complexity Low_complexity 1 30 0 689 310 91 60 chr5 23890479 23891120 -179194412 - L2 LINE L2 -15 3298 2603 759 331 92 28 chr5 23891120 23891661 -179193871 - L2 LINE L2 -981 2333 1758 1525 120 178 0 chr5 23891785 23892109 -179193423 + AluSq SINE Alu 1 367 0 687 256 0 0 chr5 23892291 23892451 -179193081 - L1PA16 LINE L1 -7 6159 6000 1027 322 88 23 chr5 23892492 23893107 -179192425 - L2 LINE L2 -1786 1528 874 225 294 29 49 chr5 23894783 23894885 -179190647 + MIR SINE MIR 41 140 -68 180 0 0 0 chr5 23894924 23894944 -179190588 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 27 29 0 0 chr5 23895300 23895334 -179190198 + AT_rich Low_complexity Low_complexity 1 34 0 1799 72 19 26 chr5 23895337 23895601 -179189931 - L1PB1 LINE L1 -9 6142 5881 1958 131 17 0 chr5 23895601 23895891 -179189641 - AluSx SINE Alu -17 295 1 2172 104 13 3 chr5 23896483 23896781 -179188751 - AluSq SINE Alu -12 301 1 191 267 109 103 chr5 23897372 23897537 -179187995 + MIR3 SINE MIR 18 183 -25 2100 125 0 0 chr5 23897600 23897888 -179187644 - AluSx SINE Alu -24 288 1 243 274 10 69 chr5 23897920 23898022 -179187510 + MER58C DNA MER1_type 120 215 0 1644 229 20 0 chr5 23899161 23899519 -179186013 - MLT1A1 LTR MaLR 0 365 1 2281 139 5 83 chr5 23900137 23900583 -179184949 + MLT2D LTR ERVL 1 411 -3 2306 89 0 0 chr5 23900707 23901000 -179184532 + AluY SINE Alu 1 293 -18 2124 221 16 0 chr5 23901744 23902193 -179183339 + MER74C LTR ERVL 5 460 0 393 346 60 41 chr5 23902704 23903117 -179182415 + L1ME1 LINE L1 26 446 -5624 467 286 62 50 chr5 23903166 23903924 -179181608 + L1ME1 LINE L1 525 1272 -4808 207 0 0 0 chr5 23903924 23903947 -179181585 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 467 286 62 50 chr5 23903947 23904182 -179181350 + L1ME1 LINE L1 1272 1503 -4577 669 252 87 0 chr5 23904191 23904433 -179181099 + L1ME1 LINE L1 4715 4977 -1103 1957 264 67 18 chr5 23904435 23905373 -179180159 + L1ME1 LINE L1 5022 6012 -88 309 309 70 30 chr5 23905527 23905757 -179179775 + L1ME LINE L1 2960 3198 -2882 485 228 16 0 chr5 23906824 23906951 -179178581 - L1MB4 LINE L1 0 6180 6052 21 0 0 0 chr5 23907359 23907380 -179178152 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 23907688 23907717 -179177815 + AT_rich Low_complexity Low_complexity 1 29 0 2065 115 7 0 chr5 23907876 23908159 -179177373 + AluSx SINE Alu 1 286 -22 620 62 21 0 chr5 23908159 23908256 -179177276 + (TATAA)n Simple_repeat Simple_repeat 4 102 0 228 222 0 19 chr5 23908444 23908498 -179177034 - LTR33A LTR ERVL -20 503 451 229 359 26 34 chr5 23908725 23908842 -179176690 - MLT2E LTR ERVL -481 147 32 217 222 0 0 chr5 23909744 23909789 -179175743 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 222 0 0 chr5 23910823 23910868 -179174664 + (TG)n Simple_repeat Simple_repeat 2 46 0 255 240 62 47 chr5 23911246 23911375 -179174157 - LTR16A LTR ERVL -18 432 302 2439 206 42 4 chr5 23911444 23911925 -179173607 + MER68 LTR ERV1 55 553 -9 1797 141 10 33 chr5 23912089 23912393 -179173139 + AluSq SINE Alu 1 297 -16 352 361 73 55 chr5 23912923 23913057 -179172475 - HERV16 LTR ERVL -765 4999 4869 2259 88 0 3 chr5 23913057 23913353 -179172179 + AluY SINE Alu 1 295 -16 352 361 73 55 chr5 23913353 23913694 -179171838 - HERV16 LTR ERVL -895 4869 4504 2038 127 0 25 chr5 23913694 23914010 -179171522 + AluSg SINE Alu 1 308 -2 352 361 73 55 chr5 23914010 23914255 -179171277 - HERV16 LTR ERVL -1260 4504 4265 413 328 34 21 chr5 23914440 23914675 -179170857 - HERV16 LTR ERVL -1672 3982 3745 298 341 90 0 chr5 23914900 23915242 -179170290 - HERV16 LTR ERVL -2333 3321 2938 789 213 87 43 chr5 23915671 23915878 -179169654 + MER20 DNA MER1_type 1 216 -3 263 297 20 20 chr5 23915930 23916031 -179169501 - HERV16 LTR ERVL -4440 556 456 245 284 37 37 chr5 23916332 23916441 -179169091 - LTR16A1 LTR ERVL -348 109 1 28 0 0 0 chr5 23916533 23916561 -179168971 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 23916991 23917015 -179168517 + AT_rich Low_complexity Low_complexity 1 24 0 547 143 58 209 chr5 23917593 23917851 -179167681 + MER20 DNA MER1_type 1 219 0 22 35 0 0 chr5 23918135 23918164 -179167368 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 23918982 23919009 -179166523 + AT_rich Low_complexity Low_complexity 1 27 0 252 220 34 0 chr5 23919251 23919310 -179166222 + MLT1L LTR MaLR 549 609 -6 339 318 109 25 chr5 23920203 23920486 -179165046 - HERV16 LTR ERVL -2154 3331 3025 2229 112 49 27 chr5 23920488 23920855 -179164677 - THE1C LTR MaLR 0 375 1 911 360 72 26 chr5 23920906 23921493 -179164039 + L3 LINE CR1 521 1134 -443 27 29 0 0 chr5 23921520 23921554 -179163978 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 23921676 23921704 -179163828 + AT_rich Low_complexity Low_complexity 1 28 0 638 328 26 15 chr5 23921727 23921998 -179163534 - LTR16B LTR ERVL 0 464 191 2126 112 3 16 chr5 23922019 23922322 -179163210 + AluSg SINE Alu 2 300 -10 228 418 29 22 chr5 23922659 23922932 -179162600 - LTR16B LTR ERVL -144 320 46 23 0 0 0 chr5 23923535 23923558 -179161974 + AT_rich Low_complexity Low_complexity 1 23 0 580 319 120 3 chr5 23923666 23923967 -179161565 - HERV16 LTR ERVL -1064 4700 4365 709 347 43 27 chr5 23925034 23925420 -179160112 - HERV16 LTR ERVL -1910 3086 2736 2204 181 124 46 chr5 23925421 23926023 -179159509 - LTR48B LTR ERV1 0 787 4 964 302 66 67 chr5 23926143 23926931 -179158601 - HERV16 LTR ERVL -2613 2383 1597 706 313 80 39 chr5 23927052 23927442 -179158090 - HERV16 LTR ERVL -3608 1388 983 546 303 70 95 chr5 23927465 23927850 -179157682 - MER77 LTR ERV1 -27 578 336 2538 46 20 0 chr5 23927850 23928155 -179157377 - AluY SINE Alu 0 311 1 546 303 70 95 chr5 23928155 23928432 -179157100 - MER77 LTR ERV1 -269 336 54 1841 70 12 0 chr5 23928861 23929104 -179156428 + L1PA7 LINE L1 5908 6153 -1 1198 172 19 94 chr5 23929259 23929578 -179155954 - AluJb SINE Alu -7 295 1 1532 184 35 49 chr5 23929687 23930035 -179155497 - MER7A DNA MER2_type -4 342 2 484 316 92 10 chr5 23930084 23930280 -179155252 + MIR SINE MIR 21 232 -30 302 260 87 31 chr5 23931238 23931365 -179154167 + L1MCa LINE L1 66 199 -6227 208 320 10 10 chr5 23931806 23931909 -179153623 + (TATG)n Simple_repeat Simple_repeat 2 104 0 247 256 11 22 chr5 23932229 23932319 -179153213 - L1ME LINE L1 -536 5585 5497 23 0 0 0 chr5 23932695 23932718 -179152814 + AT_rich Low_complexity Low_complexity 1 23 0 220 197 92 53 chr5 23933343 23933419 -179152113 - MIR3 SINE MIR -22 186 108 2115 126 3 0 chr5 23933459 23933753 -179151779 + AluSx SINE Alu 3 297 -15 189 74 0 0 chr5 23934088 23934115 -179151417 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2635 107 0 10 chr5 23934458 23934850 -179150682 + L1PA13 LINE L1 5772 6159 -4 1634 227 76 56 chr5 23936485 23936983 -179148549 - MLT2B1 LTR ERVL -8 512 5 4069 185 37 13 chr5 23937013 23937793 -179147739 - ERVL-B1 LTR ERVL -242 5522 4724 267 269 0 15 chr5 23937797 23937864 -179147668 - MER2 DNA MER2_type 0 345 280 1071 225 5 0 chr5 23937902 23938111 -179147421 - MER2 DNA MER2_type -135 210 1 4228 228 50 21 chr5 23938129 23938640 -179146892 - HERV16 LTR ERVL -3466 2298 1804 189 0 0 0 chr5 23938640 23938661 -179146871 + (TC)n Simple_repeat Simple_repeat 2 22 0 4228 228 50 21 chr5 23938661 23939251 -179146281 - HERV16 LTR ERVL -3960 1804 1128 1525 124 128 22 chr5 23939251 23939525 -179146007 - L1P4 LINE L1 -437 5729 5427 2246 142 8 13 chr5 23939525 23939905 -179145627 + L1PA16 LINE L1 5787 6164 -2 723 146 8 0 chr5 23939915 23940038 -179145494 - HERV16 LTR ERVL -4627 1137 1014 * 2484 253 43 30 chr5 23940037 23940705 -179144827 - HERV16 LTR ERVL -4877 887 211 999 214 60 0 chr5 23940706 23940745 -179144787 + AluSg/x SINE Alu 84 119 -193 243 0 0 0 chr5 23940745 23940772 -179144760 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 999 214 60 0 chr5 23940772 23940933 -179144599 + AluSg/x SINE Alu 119 296 -16 920 325 64 9 chr5 23941555 23941979 -179143553 + LTR16A LTR ERVL 1 447 -3 240 226 16 0 chr5 23941984 23942046 -179143486 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 312 321 76 8 chr5 23942163 23942294 -179143238 + MIR SINE MIR 53 192 -70 11435 210 47 32 chr5 23942321 23945995 -179139537 + L1MA4A LINE L1 1 3616 -3749 1703 177 0 3 chr5 23945995 23946277 -179139255 + AluJo SINE Alu 7 287 -25 224 29 0 29 chr5 23946280 23946314 -179139218 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 11435 210 47 32 chr5 23946314 23949615 -179135917 + L1MA4A LINE L1 3617 7361 -4 29 28 0 0 chr5 23951198 23951234 -179134298 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 23951274 23951296 -179134236 + AT_rich Low_complexity Low_complexity 1 22 0 676 295 24 9 chr5 23951296 23951506 -179134026 - MER20 DNA MER1_type 0 219 7 29 47 0 0 chr5 23951538 23951581 -179133951 + AT_rich Low_complexity Low_complexity 1 43 0 320 322 60 0 chr5 23951804 23951987 -179133545 - L1M4 LINE L1 -3156 2990 2797 26 30 0 0 chr5 23951987 23952020 -179133512 + AT_rich Low_complexity Low_complexity 1 33 0 327 278 142 13 chr5 23952039 23952341 -179133191 - L1M4 LINE L1 -3614 2532 2192 328 158 12 12 chr5 23952374 23952456 -179133076 + (TA)n Simple_repeat Simple_repeat 1 82 0 25 0 0 0 chr5 23952744 23952769 -179132763 + AT_rich Low_complexity Low_complexity 1 25 0 2681 226 46 8 chr5 23952974 23953603 -179131929 + MLT-int LTR MaLR 5 657 -1078 299 169 31 31 chr5 23953746 23953811 -179131721 + MLT-int LTR MaLR 677 741 -994 890 162 94 26 chr5 23953839 23954030 -179131502 - MSTA LTR MaLR -131 297 94 26 30 0 0 chr5 23954657 23954690 -179130842 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 23955169 23955190 -179130342 + AT_rich Low_complexity Low_complexity 1 21 0 1308 164 4 0 chr5 23955383 23955621 -179129911 + L1PA14 LINE L1 5923 6161 0 892 252 39 25 chr5 23956739 23957025 -179128507 - MLT1A1 LTR MaLR -75 290 1 1266 205 48 44 chr5 23957444 23957737 -179127795 + MLT2B1 LTR ERVL 1 294 -226 350 323 0 0 chr5 23958422 23958518 -179127014 + L2 LINE L2 3217 3312 -1 201 365 8 0 chr5 23958608 23958697 -179126835 - MIR SINE MIR -61 147 89 3444 125 2 4 chr5 23959899 23960403 -179125129 - MER9 LTR ERVK -8 503 1 3025 166 59 16 chr5 23960902 23961542 -179123990 - MER41-int LTR ERV1 -3922 3894 3227 * 3221 143 18 31 chr5 23961535 23962081 -179123451 - MER41-int LTR ERV1 -5351 595 57 872 193 28 0 chr5 23964779 23964955 -179120577 - L1PBa LINE L1 -6682 181 1 32 67 0 0 chr5 23965647 23965707 -179119825 + AT_rich Low_complexity Low_complexity 1 60 0 21 36 0 0 chr5 23965954 23965982 -179119550 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 23966591 23966620 -179118912 + AT_rich Low_complexity Low_complexity 1 29 0 304 242 0 0 chr5 23968136 23968202 -179117330 + MLT1F1 LTR MaLR 59 124 -443 2230 209 45 25 chr5 23968209 23968768 -179116764 + L1MC3 LINE L1 7196 7765 -20 196 197 16 16 chr5 23970673 23970734 -179114798 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1816 128 51 65 chr5 23970739 23971092 -179114440 + THE1C LTR MaLR 28 375 0 354 123 0 0 chr5 23971094 23971151 -179114381 + (TA)n Simple_repeat Simple_repeat 2 58 0 617 327 73 20 chr5 23971559 23971807 -179113725 + LTR16C LTR ERVL 171 431 -60 274 354 9 9 chr5 23972177 23972290 -179113242 + MLT2E LTR ERVL 47 159 -469 1458 72 25 130 chr5 23972746 23973022 -179112510 + AluYb8 SINE Alu 61 307 -11 2237 177 24 5 chr5 23973047 23973471 -179112061 + MSTB1 LTR MaLR 1 432 0 2840 220 69 3 chr5 23973471 23974122 -179111410 + MSTB1-int LTR MaLR 1 694 -957 308 265 41 10 chr5 23974223 23974321 -179111211 + L1MC2 LINE L1 6229 6329 -15 204 179 0 0 chr5 23974333 23974372 -179111160 + A-rich Low_complexity Low_complexity 1 39 0 290 326 35 47 chr5 23974587 23974759 -179110773 + L1MCc LINE L1 259 428 -5995 856 76 0 8 chr5 23974851 23974969 -179110563 - AluSp/q SINE Alu -9 304 188 216 0 0 0 chr5 23975062 23975086 -179110446 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 291 337 0 0 chr5 23975148 23975234 -179110298 + L1MCc LINE L1 824 909 -5514 1130 255 85 46 chr5 23976079 23976538 -179108994 - MLT1D LTR MaLR -3 502 26 326 197 26 0 chr5 23977914 23977990 -179107542 - MER67D LTR ERV1 -5 509 432 1958 144 26 7 chr5 23978043 23978349 -179107183 + AluSx SINE Alu 1 312 0 1165 237 40 23 chr5 23978436 23978801 -179106731 + MER66A LTR ERV1 169 459 -19 1022 183 0 7 chr5 23978807 23978999 -179106533 + MER66-int LTR ERV1 1733 2173 -4503 261 57 0 0 chr5 23978999 23979034 -179106498 + (T)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 23979339 23979362 -179106170 + AT_rich Low_complexity Low_complexity 1 23 0 741 267 169 73 chr5 23980007 23980212 -179105320 + MLT1E1 LTR MaLR 19 203 -451 1292 238 3 10 chr5 23980212 23980511 -179105021 + AluJb SINE Alu 1 297 -15 741 267 169 73 chr5 23980511 23980784 -179104748 + MLT1E1 LTR MaLR 203 543 -111 264 167 0 0 chr5 23982261 23982303 -179103229 + MLT1A1 LTR MaLR 5 46 -328 234 0 0 0 chr5 23982361 23982387 -179103145 + (ATG)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr5 23982387 23982411 -179103121 + (TTA)n Simple_repeat Simple_repeat 3 26 0 3116 31 0 3 chr5 23982419 23982803 -179102729 + L1P LINE L1 3635 4017 -2129 388 165 35 0 chr5 23982791 23982876 -179102656 - L1MA3 LINE L1 -179 6126 6039 * 1060 149 0 0 chr5 23982876 23983051 -179102481 + L1MA3 LINE L1 6125 6305 0 1268 264 32 5 chr5 23983052 23983367 -179102165 + MLT1A1 LTR MaLR 37 361 -4 21 36 0 0 chr5 23983872 23983900 -179101632 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 23984721 23984773 -179100759 + AT_rich Low_complexity Low_complexity 1 52 0 37 52 0 0 chr5 23984819 23984877 -179100655 + AT_rich Low_complexity Low_complexity 1 58 0 667 219 0 0 chr5 23984929 23985066 -179100466 - MSTC LTR MaLR 0 428 292 1698 94 0 55 chr5 23985592 23985846 -179099686 - AluSg SINE Alu -21 289 50 299 160 42 34 chr5 23987805 23987924 -179097608 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 353 57 95 25 chr5 23987927 23987943 -179097589 + (TA)n Simple_repeat Simple_repeat 2 15 -155 2644 41 0 0 chr5 23987943 23988260 -179097272 - AluYb8 SINE Alu -1 317 1 353 57 95 25 chr5 23988260 23988401 -179097131 + (TA)n Simple_repeat Simple_repeat 15 170 0 25 31 0 0 chr5 23988439 23988471 -179097061 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 23988665 23988687 -179096845 + AT_rich Low_complexity Low_complexity 1 22 0 615 260 86 32 chr5 23989571 23989965 -179095567 - MSTD LTR MaLR 0 396 3 200 250 0 0 chr5 23990044 23990084 -179095448 + MER5A DNA MER1_type 10 49 -140 22 0 0 0 chr5 23990983 23991005 -179094527 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 23991207 23991228 -179094304 + AT_rich Low_complexity Low_complexity 1 21 0 328 294 110 48 chr5 23991832 23991978 -179093554 - L2 LINE L2 -1 3271 3117 339 192 222 20 chr5 23992413 23992512 -179093020 - L2 LINE L2 -5 3308 3190 1767 111 0 4 chr5 23993380 23993641 -179091891 + L1PB1 LINE L1 5892 6151 0 21 0 0 0 chr5 23994309 23994330 -179091202 + AT_rich Low_complexity Low_complexity 1 21 0 224 328 0 30 chr5 23994356 23994423 -179091109 + L2 LINE L2 3234 3298 -15 337 279 79 63 chr5 23994661 23994915 -179090617 - L1MC/D LINE L1 -2294 5514 5257 351 0 0 0 chr5 23996394 23996433 -179089099 + (TG)n Simple_repeat Simple_repeat 1 39 0 309 26 0 0 chr5 23996432 23996470 -179089062 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 1997 147 0 0 chr5 23997105 23997391 -179088141 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr5 23998515 23998540 -179086992 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 24001104 24001133 -179084399 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 24001188 24001226 -179084306 + AT_rich Low_complexity Low_complexity 1 38 0 1160 66 0 6 chr5 24002425 24002591 -179082941 - L1P LINE L1 -727 5427 5263 6223 90 1 6 chr5 24002691 24003561 -179081971 - L1P LINE L1 -1242 4904 4039 438 168 30 20 chr5 24004642 24004743 -179080789 - L1ME3A LINE L1 -182 5988 5887 22 0 0 0 chr5 24004885 24004907 -179080625 + AT_rich Low_complexity Low_complexity 1 22 0 233 169 92 31 chr5 24004933 24004998 -179080534 + MLT1I LTR MaLR 318 386 -23 232 280 13 0 chr5 24005029 24005104 -179080428 - L1MEc LINE L1 -3806 2576 2501 347 303 93 47 chr5 24005492 24006165 -179079367 - L1MEc LINE L1 -4671 1713 1013 1447 210 17 0 chr5 24006248 24006539 -179078993 + AluJb SINE Alu 1 296 -16 1801 281 71 26 chr5 24006619 24007051 -179078481 - L1ME1 LINE L1 -5 6161 5750 1470 222 48 16 chr5 24007051 24007429 -179078103 - MLT1B LTR MaLR 0 390 1 1801 281 71 26 chr5 24007429 24008647 -179076885 - L1ME1 LINE L1 -416 5750 4441 22 35 0 0 chr5 24008793 24008822 -179076710 + AT_rich Low_complexity Low_complexity 1 29 0 204 163 23 0 chr5 24011149 24011192 -179074340 + (TA)n Simple_repeat Simple_repeat 2 45 0 1717 160 0 22 chr5 24011564 24011883 -179073649 + AluSx SINE Alu 1 312 0 1919 116 27 3 chr5 24012172 24012473 -179073059 + AluSq SINE Alu 3 310 -3 342 0 0 0 chr5 24012729 24012767 -179072765 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1910 121 0 0 chr5 24013023 24013315 -179072217 + AluSq SINE Alu 21 312 0 28 48 0 0 chr5 24013997 24014039 -179071493 + AT_rich Low_complexity Low_complexity 1 42 0 180 368 81 0 chr5 24014043 24014130 -179071402 - MIR3 SINE MIR -28 180 87 748 155 13 2 chr5 24014130 24014284 -179071248 - MLT1A1 LTR MaLR -2 363 236 357 182 20 81 chr5 24014293 24014392 -179071140 - MLT1A1 LTR MaLR -266 99 7 1337 216 68 60 chr5 24014584 24015085 -179070447 + MLT1D LTR MaLR 1 505 0 32 67 0 0 chr5 24015545 24015605 -179069927 + AT_rich Low_complexity Low_complexity 1 60 0 261 350 88 8 chr5 24016663 24016903 -179068629 + MIR SINE MIR 3 261 -1 27 29 0 0 chr5 24016986 24017020 -179068512 + AT_rich Low_complexity Low_complexity 1 34 0 24492 150 15 14 chr5 24018320 24020916 -179064616 - L1PA8A LINE L1 -1 6445 3854 207 0 0 0 chr5 24020916 24020939 -179064593 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 24492 150 15 14 chr5 24020939 24024709 -179060823 - L1PA8A LINE L1 -2592 3854 4 1837 166 0 0 chr5 24024886 24025193 -179060339 - AluSx SINE Alu -5 307 1 1420 130 0 14 chr5 24025230 24025445 -179060087 + AluSx SINE Alu 5 216 -96 239 220 40 20 chr5 24027376 24027476 -179058056 + (TA)n Simple_repeat Simple_repeat 2 103 0 1045 241 120 35 chr5 24027636 24027952 -179057580 - MLT1A2 LTR MaLR -31 343 1 180 302 128 12 chr5 24028044 24028130 -179057402 + L2 LINE L2 2111 2206 -1108 204 370 77 6 chr5 24028231 24028412 -179057120 + L2 LINE L2 3120 3313 0 347 290 161 14 chr5 24028559 24028776 -179056756 + MER110 LTR ERV1 91 339 -152 2959 127 33 0 chr5 24028779 24029228 -179056304 + MER1A DNA MER1_type 66 529 0 305 279 130 13 chr5 24029242 24029396 -179056136 + MER110 LTR ERV1 320 491 0 469 251 95 56 chr5 24030155 24030386 -179055146 - MER68 LTR ERV1 -77 485 246 1716 173 3 14 chr5 24031376 24031671 -179053861 - AluJb SINE Alu 0 312 21 25 51 0 0 chr5 24032320 24032359 -179053173 + AT_rich Low_complexity Low_complexity 1 39 0 947 206 27 38 chr5 24032895 24032961 -179052571 - L1MC3 LINE L1 -21 7764 7699 2508 113 22 8 chr5 24032961 24033331 -179052201 + THE1C LTR MaLR 1 375 0 947 206 27 38 chr5 24033331 24033526 -179052006 - L1MC3 LINE L1 -86 7699 7506 605 247 48 12 chr5 24034144 24034310 -179051222 - MIR SINE MIR -2 260 89 1140 160 52 5 chr5 24034401 24034614 -179050918 + MER39 LTR ERV1 485 707 0 240 174 0 22 chr5 24034645 24034691 -179050841 + MER39 LTR ERV1 660 704 -3 2131 127 135 5 chr5 24035107 24035486 -179050046 - MSTA LTR MaLR 0 428 1 966 242 29 6 chr5 24035790 24036104 -179049428 - MER33 DNA MER1_type 0 324 4 405 279 0 36 chr5 24036123 24036234 -179049298 + MER5A DNA MER1_type 9 115 -74 181 291 18 0 chr5 24036212 24036267 -179049265 - MER5B DNA MER1_type -121 57 2 * 203 244 0 0 chr5 24036517 24036562 -179048970 + (TG)n Simple_repeat Simple_repeat 2 46 0 242 407 0 9 chr5 24037088 24037196 -179048336 + MIR SINE MIR 6 112 -150 3368 116 16 4 chr5 24037228 24037729 -179047803 - MER84 LTR ERV1 0 507 1 225 94 0 0 chr5 24037988 24038020 -179047512 + (CAT)n Simple_repeat Simple_repeat 1 32 0 1326 99 6 0 chr5 24038080 24038252 -179047280 - AluSp SINE Alu -17 296 124 194 300 170 0 chr5 24038264 24038364 -179047168 - MIR SINE MIR -81 181 65 1774 169 24 71 chr5 24038631 24039040 -179046492 + MLT1B LTR MaLR 1 390 0 363 253 0 11 chr5 24039038 24039129 -179046403 - Tigger5 DNA MER2_type 0 2323 2234 376 133 0 17 chr5 24039179 24039239 -179046293 - Tigger5 DNA MER2_type 0 2323 2265 369 109 0 0 chr5 24039438 24039493 -179046039 + (TAA)n Simple_repeat Simple_repeat 1 55 0 815 304 124 13 chr5 24040386 24040781 -179044751 + MER110-int LTR ERV1 4177 4615 -32 808 274 46 69 chr5 24040969 24041359 -179044173 + MER110 LTR ERV1 103 483 -8 23 33 0 0 chr5 24042703 24042733 -179042799 + AT_rich Low_complexity Low_complexity 1 30 0 390 42 0 0 chr5 24042943 24042991 -179042541 + (TG)n Simple_repeat Simple_repeat 1 48 0 214 186 0 23 chr5 24042991 24043034 -179042498 + GA-rich Low_complexity Low_complexity 5 46 0 1485 185 10 49 chr5 24043090 24043398 -179042134 + AluJo SINE Alu 12 307 -5 24 77 0 0 chr5 24043503 24043555 -179041977 + AT_rich Low_complexity Low_complexity 1 52 0 2467 54 0 3 chr5 24044589 24044887 -179040645 - AluY SINE Alu -1 310 14 2737 136 17 110 chr5 24046060 24046641 -179038891 + MER1A DNA MER1_type 1 527 0 1360 194 91 97 chr5 24046695 24047133 -179038399 + MER34B LTR ERV1 35 474 -91 2294 102 3 0 chr5 24047133 24047437 -179038095 + AluSc SINE Alu 1 305 -4 1360 194 91 97 chr5 24047437 24047520 -179038012 + MER34B LTR ERV1 474 510 -55 3372 229 47 33 chr5 24047520 24047912 -179037620 - MER21B LTR ERV1 -3 860 475 1545 187 0 28 chr5 24047912 24048196 -179037336 - AluJo SINE Alu -31 281 6 3372 229 47 33 chr5 24048196 24048651 -179036881 - MER21B LTR ERV1 -388 475 1 1360 194 91 97 chr5 24048651 24048706 -179036826 + MER34B LTR ERV1 510 564 -1 1045 248 63 27 chr5 24048718 24049017 -179036515 + MLT1E LTR MaLR 284 593 0 421 255 38 118 chr5 24049386 24049649 -179035883 - MIR SINE MIR 0 262 21 25 31 0 0 chr5 24050516 24050548 -179034984 + AT_rich Low_complexity Low_complexity 1 32 0 5548 121 18 1 chr5 24050548 24051386 -179034146 - L1PA10 LINE L1 -11 7595 6744 2313 161 3 0 chr5 24051389 24051755 -179033777 - THE1C LTR MaLR -8 367 1 23160 192 13 35 chr5 24051757 24053380 -179032152 - L1PA10 LINE L1 -841 6743 5086 2195 92 0 7 chr5 24053380 24053690 -179031842 - AluY SINE Alu 0 308 1 23160 192 13 35 chr5 24053690 24057609 -179027923 - L1PA10 LINE L1 -2498 5086 11 379 286 34 20 chr5 24058432 24058579 -179026953 + MIR SINE MIR 103 251 -11 252 161 0 18 chr5 24058683 24058739 -179026793 - L1PA12 LINE L1 -2 6166 6112 1901 145 35 29 chr5 24058740 24059050 -179026482 - AluSx SINE Alu 0 312 1 2236 109 0 7 chr5 24059949 24060252 -179025280 - AluSq SINE Alu -12 301 1 404 164 0 0 chr5 24061073 24061134 -179024398 - AluS SINE Alu -240 63 3 23 33 0 0 chr5 24061992 24062022 -179023510 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 24062064 24062106 -179023426 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 24062179 24062201 -179023331 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 24062683 24062705 -179022827 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 24062910 24062944 -179022588 + AT_rich Low_complexity Low_complexity 1 34 0 223 355 13 0 chr5 24063272 24063348 -179022184 - L2 LINE L2 0 3313 3237 204 289 58 0 chr5 24063687 24063739 -179021793 - L2 LINE L2 -558 2756 2702 258 143 0 0 chr5 24063747 24063796 -179021736 + (TG)n Simple_repeat Simple_repeat 2 50 0 372 385 6 0 chr5 24063925 24064086 -179021446 - L2 LINE L2 -782 2532 2371 18320 122 16 12 chr5 24064338 24067162 -179018370 + L1PA6 LINE L1 11 2843 -3303 17587 71 6 0 chr5 24067165 24070371 -179015161 + L1PA6 LINE L1 2975 6154 0 206 306 134 30 chr5 24071386 24071520 -179014012 - MIR SINE MIR -33 229 82 375 278 144 0 chr5 24072089 24072269 -179013263 - LTR33A LTR ERVL 0 523 318 261 208 8 136 chr5 24072290 24072415 -179013117 - LTR33A LTR ERVL -413 110 2 24 32 0 0 chr5 24072509 24072540 -179012992 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 24072667 24072695 -179012837 + AT_rich Low_complexity Low_complexity 1 28 0 900 232 38 0 chr5 24072868 24073079 -179012453 + MER58A DNA MER1_type 1 219 -5 1594 229 8 11 chr5 24074791 24075149 -179010383 + MLT1A1 LTR MaLR 1 357 -8 180 0 0 0 chr5 24075482 24075502 -179010030 + (TC)n Simple_repeat Simple_repeat 1 20 0 516 16 0 0 chr5 24075505 24075566 -179009966 + (CA)n Simple_repeat Simple_repeat 2 62 0 358 337 86 29 chr5 24075643 24075922 -179009610 + MLT1K LTR MaLR 279 573 -15 3973 158 38 6 chr5 24076073 24076762 -179008770 - MER50 LTR ERV1 -23 711 1 380 297 0 0 chr5 24076766 24076857 -179008675 + MER63A DNA MER1_type 102 192 -18 6221 196 84 33 chr5 24076955 24078362 -179007170 + L1MC1 LINE L1 25 1672 -4754 2049 137 3 13 chr5 24078362 24078675 -179006857 + AluSg SINE Alu 1 310 0 6221 196 84 33 chr5 24078675 24079655 -179005877 + L1MC1 LINE L1 1672 2601 -3825 1851 89 4 0 chr5 24079661 24079896 -179005636 + AluSp SINE Alu 1 236 -77 886 90 0 0 chr5 24079896 24080007 -179005525 - AluSp SINE Alu -202 111 1 4937 230 31 26 chr5 24080018 24082227 -179003305 + L1MC1 LINE L1 4391 6607 -6 25 0 0 0 chr5 24082245 24082270 -179003262 + AT_rich Low_complexity Low_complexity 1 25 0 270 0 0 0 chr5 24082478 24082508 -179003024 + (TG)n Simple_repeat Simple_repeat 2 31 0 1953 147 25 77 chr5 24082522 24082924 -179002608 + Tigger2 DNA MER2_type 2338 2718 0 323 324 40 47 chr5 24084223 24084371 -179001161 - MIR SINE MIR -64 198 52 1437 210 7 20 chr5 24084792 24085097 -179000435 - AluJo SINE Alu -11 301 1 1479 174 48 7 chr5 24085243 24085513 -179000019 - MLT1A1 LTR MaLR -4 361 81 2130 152 16 21 chr5 24085513 24085889 -178999643 + THE1C LTR MaLR 2 375 0 24 0 0 0 chr5 24086034 24086058 -178999474 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 24086417 24086439 -178999093 + AT_rich Low_complexity Low_complexity 1 22 0 252 200 215 0 chr5 24086676 24086741 -178998791 + MER58B DNA MER1_type 12 90 -251 23 33 0 0 chr5 24086741 24086771 -178998761 + AT_rich Low_complexity Low_complexity 1 30 0 524 248 41 7 chr5 24086771 24086916 -178998616 + MER58B DNA MER1_type 168 317 -24 1036 261 178 53 chr5 24087186 24087865 -178997667 + LTR41 LTR ERVL 9 772 -1 22 56 0 0 chr5 24088649 24088685 -178996847 + AT_rich Low_complexity Low_complexity 1 36 0 1629 188 47 3 chr5 24088813 24089154 -178996378 + L1MA6 LINE L1 5940 6295 -5 2302 72 13 35 chr5 24089335 24089653 -178995879 - AluSp SINE Alu -2 311 1 2082 54 108 0 chr5 24089661 24089939 -178995593 - AluY SINE Alu -3 308 1 21 71 0 0 chr5 24090427 24090469 -178995063 + AT_rich Low_complexity Low_complexity 1 42 0 2411 73 0 19 chr5 24090622 24090935 -178994597 - AluY SINE Alu 0 311 5 2258 91 0 28 chr5 24091793 24092111 -178993421 + AluY SINE Alu 2 310 -1 297 312 110 9 chr5 24093472 24093581 -178991951 - MIR SINE MIR -114 148 29 548 228 38 97 chr5 24094521 24094758 -178990774 + MIR SINE MIR 17 239 -23 2145 118 23 0 chr5 24094836 24095142 -178990390 - AluSp SINE Alu 0 313 1 1133 245 70 47 chr5 24095171 24095616 -178989916 + LTR40b LTR ERVL 8 462 0 1270 272 30 92 chr5 24095632 24096209 -178989323 + HERVL40 LTR ERVL 28 568 -4962 494 333 12 0 chr5 24096252 24096417 -178989115 + HERVL40 LTR ERVL 565 731 -4799 1270 205 32 87 chr5 24096424 24096804 -178988728 - MLT1A2 LTR MaLR 0 374 16 195 42 0 0 chr5 24096807 24096831 -178988701 + (CATTA)n Simple_repeat Simple_repeat 1 24 0 372 296 0 78 chr5 24096883 24097025 -178988507 + HERVL40 LTR ERVL 784 914 -4616 1133 307 63 35 chr5 24097029 24097566 -178987966 + HERVL40 LTR ERVL 1064 1615 -3915 1966 114 17 10 chr5 24097647 24097955 -178987577 + AluY SINE Alu 1 311 0 452 334 48 48 chr5 24097998 24098372 -178987160 + MER89-int LTR ERV1 6118 6491 -310 * 782 255 43 51 chr5 24098350 24098605 -178986927 + HERVL40 LTR ERVL 5278 5530 0 1528 265 51 18 chr5 24098617 24099108 -178986424 + LTR40a LTR ERVL 13 519 0 407 253 22 90 chr5 24099205 24099257 -178986275 + MIR SINE MIR 76 130 -132 1527 250 124 48 chr5 24099257 24099862 -178985670 + MLT1E1 LTR MaLR 1 651 -3 407 253 22 90 chr5 24099862 24099987 -178985545 + MIR SINE MIR 130 241 -21 420 55 0 0 chr5 24100542 24100597 -178984935 + (CA)n Simple_repeat Simple_repeat 2 56 0 203 250 36 24 chr5 24100624 24100708 -178984824 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 2157 106 0 16 chr5 24101224 24101527 -178984005 + AluSg SINE Alu 1 298 -12 1215 191 233 11 chr5 24101755 24102137 -178983395 + MLT1C LTR MaLR 1 467 0 966 227 35 5 chr5 24102137 24102340 -178983192 + MER58A DNA MER1_type 10 218 -6 486 321 46 25 chr5 24102667 24102904 -178982628 - MIR SINE MIR -16 246 5 303 363 32 19 chr5 24102915 24103072 -178982460 + L2 LINE L2 416 574 -2740 247 295 16 57 chr5 24103113 24103235 -178982297 + L2 LINE L2 1046 1162 -2152 3732 134 45 3 chr5 24103553 24104171 -178981361 + LTR9B LTR ERV1 1 644 0 744 295 40 80 chr5 24104249 24104312 -178981220 + HERVL LTR ERVL 4218 4282 -1206 789 235 61 24 chr5 24104312 24104525 -178981007 - MER58A DNA MER1_type 0 224 4 744 295 40 80 chr5 24104525 24104861 -178980671 + HERVL LTR ERVL 4282 4604 -884 319 273 16 48 chr5 24105058 24105199 -178980333 - MLT1I LTR MaLR -225 184 91 612 318 70 32 chr5 24105524 24105955 -178979577 + HERVL LTR ERVL 4898 5344 -420 1873 161 18 174 chr5 24106184 24106743 -178978789 + MER70A LTR ERVL 1 472 0 213 450 0 0 chr5 24106992 24107112 -178978420 + MIR SINE MIR 30 149 -59 29 0 0 0 chr5 24107320 24107349 -178978183 + AT_rich Low_complexity Low_complexity 1 29 0 438 181 23 12 chr5 24107370 24107541 -178977991 + (TA)n Simple_repeat Simple_repeat 2 174 0 469 134 28 34 chr5 24107560 24107739 -178977793 + (TA)n Simple_repeat Simple_repeat 1 178 0 22 0 0 0 chr5 24107751 24107773 -178977759 + AT_rich Low_complexity Low_complexity 1 22 0 278 167 31 31 chr5 24107784 24107946 -178977586 + (TA)n Simple_repeat Simple_repeat 1 162 0 29 0 0 0 chr5 24107967 24107996 -178977536 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 24108102 24108138 -178977394 + AT_rich Low_complexity Low_complexity 1 36 0 193 224 12 12 chr5 24108248 24108333 -178977199 + (TA)n Simple_repeat Simple_repeat 1 85 0 21 0 0 0 chr5 24108343 24108364 -178977168 + AT_rich Low_complexity Low_complexity 1 21 0 47 19 0 0 chr5 24108439 24108493 -178977039 + AT_rich Low_complexity Low_complexity 1 54 0 269 194 48 32 chr5 24108789 24108851 -178976681 + MER115 DNA AcHobo 10 72 -621 357 24 0 0 chr5 24108888 24108930 -178976602 + (CA)n Simple_repeat Simple_repeat 2 43 0 1382 137 66 0 chr5 24108977 24109218 -178976314 + MER67C LTR ERV1 7 263 -447 2237 106 109 0 chr5 24109218 24109558 -178975974 - MER51B LTR ERV1 0 377 1 1896 151 78 0 chr5 24109562 24109881 -178975651 - MER51B-int LTR ERV1 -3 7813 7470 557 194 85 8 chr5 24109881 24110010 -178975522 - LTR54B LTR ERV1 -357 141 3 10552 122 55 22 chr5 24110010 24111696 -178973836 - MER51B-int LTR ERV1 -389 7148 5407 1992 119 5 4 chr5 24111683 24112083 -178973449 - MER51B-int LTR ERV1 -2563 2654 2210 * 891 220 5 28 chr5 24112092 24112310 -178973222 - MER51B-int LTR ERV1 -3258 1959 1747 3854 104 23 95 chr5 24112320 24113014 -178972518 + LTR9B LTR ERV1 1 644 0 1463 151 23 0 chr5 24113015 24113273 -178972259 - MER51B-int LTR ERV1 -2859 3087 2824 6687 117 68 8 chr5 24113288 24114604 -178970928 - MER51B-int LTR ERV1 -4551 3265 1810 541 135 114 115 chr5 24114604 24114801 -178970731 - MER4A LTR ERV1 -131 648 276 3907 170 10 13 chr5 24114872 24115582 -178969950 - MER51B-int LTR ERV1 -6321 1495 788 822 55 0 71 chr5 24115585 24115712 -178969820 - MER51B-int LTR ERV1 -7698 118 1 1896 136 121 9 chr5 24115712 24115809 -178969723 - MER51B LTR ERV1 0 377 292 2290 102 3 0 chr5 24115809 24116114 -178969418 + AluSp SINE Alu 1 306 -7 1896 136 121 9 chr5 24116114 24116355 -178969177 - MER51B LTR ERV1 -85 292 1 * 2760 141 13 2 chr5 24116355 24116801 -178968731 + MER67C LTR ERV1 260 710 0 313 389 46 11 chr5 24116810 24116985 -178968547 + MER115 DNA AcHobo 153 333 -360 201 39 0 0 chr5 24117048 24117074 -178968458 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 243 260 48 27 chr5 24117467 24117613 -178967919 + Zaphod DNA AcHobo 3851 3999 -32 868 237 117 53 chr5 24118090 24118432 -178967100 + MLT1A1 LTR MaLR 2 365 0 306 87 0 0 chr5 24118904 24118950 -178966582 + (CA)n Simple_repeat Simple_repeat 1 46 0 24 67 0 0 chr5 24119594 24119639 -178965893 + AT_rich Low_complexity Low_complexity 1 45 0 1445 119 13 0 chr5 24120080 24120307 -178965225 - L1MA1 LINE L1 0 6302 6073 360 291 60 0 chr5 24120691 24120825 -178964707 - LTR50 LTR ERVL -653 142 1 25 0 0 0 chr5 24121398 24121423 -178964109 + AT_rich Low_complexity Low_complexity 1 25 0 295 56 0 0 chr5 24121612 24121648 -178963884 + U2 snRNA snRNA 1 36 -152 183 42 0 0 chr5 24122386 24122410 -178963122 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 421 272 113 51 chr5 24122426 24122547 -178962985 + MLT1I LTR MaLR 85 224 -185 1989 158 116 13 chr5 24122547 24122934 -178962598 - MSTA LTR MaLR 0 428 2 421 272 113 51 chr5 24122934 24123007 -178962525 + MLT1I LTR MaLR 224 291 -118 345 276 129 72 chr5 24123294 24123332 -178962200 + HAL1 LINE L1 1032 1066 -1441 2077 84 0 24 chr5 24123332 24123619 -178961913 - AluSp SINE Alu -21 292 13 345 276 129 72 chr5 24123619 24123953 -178961579 + HAL1 LINE L1 1066 1425 -1082 294 282 69 88 chr5 24123996 24124494 -178961038 + HAL1 LINE L1 1519 2025 -482 3123 106 22 2 chr5 24124494 24124938 -178960594 + MLT2A2 LTR ERVL 1 453 0 294 282 69 88 chr5 24124938 24124969 -178960563 + HAL1 LINE L1 2025 2055 -452 1955 102 47 70 chr5 24124969 24125127 -178960405 + THE1C LTR MaLR 1 161 -214 2015 88 3 82 chr5 24125127 24125458 -178960074 - AluSq SINE Alu -6 307 3 1955 102 47 70 chr5 24125458 24125683 -178959849 + THE1C LTR MaLR 161 375 0 294 282 69 88 chr5 24125683 24126038 -178959494 + HAL1 LINE L1 2055 2387 -120 5224 167 28 15 chr5 24126643 24128104 -178957428 - L1MA8 LINE L1 -42 6249 4777 347 274 0 0 chr5 24129827 24129911 -178955621 - L2 LINE L2 -1346 1968 1885 394 242 0 32 chr5 24130014 24130109 -178955423 + MLT1E1 LTR MaLR 60 151 -503 1553 172 14 84 chr5 24130174 24130439 -178955093 + Tigger2a DNA MER2_type 3 236 -2472 2087 107 30 0 chr5 24130439 24130738 -178954794 + AluY SINE Alu 1 308 -3 1553 172 14 84 chr5 24130738 24130839 -178954693 + Tigger2a DNA MER2_type 236 343 -91 686 325 55 52 chr5 24131286 24131502 -178954030 + LTR16A LTR ERVL 36 255 -195 1107 40 33 13 chr5 24131502 24131679 -178953853 - L1PA3 LINE L1 0 6155 5998 686 325 55 52 chr5 24131679 24131862 -178953670 + LTR16A LTR ERVL 255 436 -14 711 275 51 36 chr5 24131880 24132156 -178953376 + HERV16 LTR ERVL 8 287 -4709 618 335 43 33 chr5 24132261 24132658 -178952874 + HERV16 LTR ERVL 458 858 -4138 2135 109 7 0 chr5 24132673 24132958 -178952574 + AluSp SINE Alu 3 289 -24 395 372 46 10 chr5 24132986 24133290 -178952242 + HERV16 LTR ERVL 1002 1316 -3680 398 381 25 12 chr5 24133479 24133723 -178951809 + HERV16 LTR ERVL 1334 1580 -3416 2306 310 99 30 chr5 24133780 24134593 -178950939 + HERV16 LTR ERVL 1710 2648 -2348 1556 238 31 8 chr5 24134593 24134980 -178950552 + MSTD LTR MaLR 1 396 0 2306 310 99 30 chr5 24134980 24135456 -178950076 + HERV16 LTR ERVL 2648 3089 -1907 599 283 76 83 chr5 24135935 24136213 -178949319 + HERV16 LTR ERVL 3315 3591 -2063 1876 169 85 2 chr5 24136213 24136615 -178948917 + LTR23 LTR ERV1 1 435 -2 599 283 76 83 chr5 24136615 24136756 -178948776 + HERV16 LTR ERVL 3591 3731 -1923 258 344 23 16 chr5 24137054 24137182 -178948350 + LTR16A LTR ERVL 178 306 -144 237 132 26 0 chr5 24137183 24137221 -178948311 - MLT2B1 LTR ERVL 0 444 406 305 81 68 0 chr5 24137230 24137304 -178948228 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 655 246 92 77 chr5 24137311 24137660 -178947872 - MLT2B1 LTR ERVL -60 354 1 357 343 43 0 chr5 24137662 24137802 -178947730 + LTR16A LTR ERVL 305 450 0 250 245 10 39 chr5 24138120 24138222 -178947310 - MER97b DNA MER1_type? -871 182 84 730 185 167 0 chr5 24138269 24138431 -178947101 + MER5A DNA MER1_type 1 189 0 25 0 0 0 chr5 24138456 24138481 -178947051 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 24139192 24139217 -178946315 + AT_rich Low_complexity Low_complexity 1 25 0 184 77 51 0 chr5 24139997 24140036 -178945496 + (TA)n Simple_repeat Simple_repeat 2 42 0 31 0 0 0 chr5 24140089 24140120 -178945412 + AT_rich Low_complexity Low_complexity 1 31 0 2261 109 0 0 chr5 24140465 24140776 -178944756 - AluY SINE Alu 0 311 1 692 174 0 8 chr5 24142072 24142204 -178943328 + FLAM_C SINE Alu 3 133 0 220 310 103 35 chr5 24143925 24144070 -178941462 - MER5A DNA MER1_type -28 161 7 26 0 0 0 chr5 24144615 24144641 -178940891 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 24144931 24144955 -178940577 + AT_rich Low_complexity Low_complexity 1 24 0 229 191 43 0 chr5 24146366 24146413 -178939119 - L1MC4 LINE L1 -1340 6702 6654 2159 141 75 0 chr5 24146420 24146795 -178938737 - MER57A LTR ERV1 0 403 1 315 299 85 37 chr5 24146883 24147154 -178938378 - L1ME4a LINE L1 -12 6109 5826 207 0 0 0 chr5 24147167 24147190 -178938342 + (CTATT)n Simple_repeat Simple_repeat 2 24 0 1157 276 42 30 chr5 24147225 24147627 -178937905 + MLT1C LTR MaLR 60 466 -1 386 275 0 0 chr5 24147631 24147711 -178937821 - Tigger7 DNA MER2_type -5 2482 2403 1761 136 25 113 chr5 24147718 24148071 -178937461 + Tigger3(Golem) DNA MER2_type 26 3028 -1 2200 235 17 0 chr5 24148083 24148543 -178936989 - Tigger7 DNA MER2_type -213 520 53 2037 118 0 33 chr5 24148756 24149062 -178936470 + AluSg SINE Alu 3 298 -12 24 77 0 0 chr5 24149550 24149602 -178935930 + AT_rich Low_complexity Low_complexity 1 52 0 2000 152 0 0 chr5 24150228 24150537 -178934995 - AluSx SINE Alu -3 309 1 22 0 0 0 chr5 24150580 24150602 -178934930 + AT_rich Low_complexity Low_complexity 1 22 0 684 313 38 4 chr5 24151062 24151302 -178934230 - MIR SINE MIR -12 250 3 225 157 0 39 chr5 24151481 24151532 -178934000 + (TA)n Simple_repeat Simple_repeat 2 50 0 234 0 0 0 chr5 24151532 24151558 -178933974 + (CA)n Simple_repeat Simple_repeat 2 27 0 2581 58 0 0 chr5 24151743 24152054 -178933478 - AluY SINE Alu 0 311 1 903 299 78 25 chr5 24152734 24153092 -178932440 - LTR16C LTR ERVL -14 477 101 26 30 0 0 chr5 24153632 24153665 -178931867 + AT_rich Low_complexity Low_complexity 1 33 0 202 338 135 23 chr5 24153945 24154078 -178931454 - L2 LINE L2 -795 2519 2372 1840 170 141 5 chr5 24154082 24154459 -178931073 + MSTA LTR MaLR 1 428 0 8581 205 11 2 chr5 24154461 24156096 -178929436 + MSTA-int LTR MaLR 2 1651 0 1531 197 186 19 chr5 24156096 24156420 -178929112 + MSTB LTR MaLR 1 270 -156 192 97 0 0 chr5 24156420 24156451 -178929081 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1743 193 3 0 chr5 24156451 24156747 -178928785 - AluJb SINE Alu -15 297 1 1531 197 186 19 chr5 24156747 24156786 -178928746 + MSTB LTR MaLR 269 426 0 382 155 0 0 chr5 24157054 24157125 -178928407 + L1PB4 LINE L1 6086 6156 0 525 296 75 19 chr5 24159077 24159502 -178926030 + L1ME3A LINE L1 4884 5332 -814 1179 290 94 2 chr5 24159518 24159998 -178925534 + L1ME3A LINE L1 5406 5929 -241 1474 236 67 0 chr5 24159998 24160384 -178925148 + L1MB4 LINE L1 5768 6179 -1 336 258 91 40 chr5 24160393 24160591 -178924941 + L1ME3A LINE L1 5661 5868 -253 303 297 79 79 chr5 24160831 24160996 -178924536 + L1ME3A LINE L1 5995 6159 -11 200 213 0 0 chr5 24162343 24162390 -178923142 + A-rich Low_complexity Low_complexity 1 47 0 25 65 0 0 chr5 24163617 24163663 -178921869 + AT_rich Low_complexity Low_complexity 1 46 0 36 70 0 0 chr5 24165454 24165525 -178920007 + AT_rich Low_complexity Low_complexity 1 71 0 319 358 91 11 chr5 24165531 24165718 -178919814 - MIR SINE MIR -5 257 56 50 42 0 0 chr5 24165875 24165946 -178919586 + AT_rich Low_complexity Low_complexity 1 71 0 1190 243 24 36 chr5 24166107 24166436 -178919096 - MSTD LTR MaLR -8 388 64 205 343 86 23 chr5 24166681 24166856 -178918676 - MIR SINE MIR -48 214 29 397 327 31 75 chr5 24166998 24167252 -178918280 - MIR SINE MIR -18 244 2 13005 189 60 21 chr5 24168503 24170227 -178915305 - L1PB1 LINE L1 -2 6865 5210 2196 114 3 0 chr5 24170227 24170525 -178915007 - AluSp SINE Alu -14 299 1 13005 189 60 21 chr5 24170525 24174635 -178910897 - L1PB1 LINE L1 -1657 5210 620 871 197 5 30 chr5 24174620 24174818 -178910714 - L1PB1 LINE L1 -6668 195 3 * 279 0 0 0 chr5 24175401 24175432 -178910100 + (CA)n Simple_repeat Simple_repeat 2 32 0 266 255 130 57 chr5 24175452 24175820 -178909712 + L1MEc LINE L1 1389 1932 -4284 310 243 148 33 chr5 24176283 24176493 -178909039 + L1MEc LINE L1 2199 2432 -3783 22 35 0 0 chr5 24177297 24177326 -178908206 + AT_rich Low_complexity Low_complexity 1 29 0 657 123 47 0 chr5 24177366 24177472 -178908060 + HY1 scRNA scRNA 1 111 -1 24 0 0 0 chr5 24177472 24177496 -178908036 + AT_rich Low_complexity Low_complexity 1 24 0 1165 121 0 0 chr5 24177517 24177674 -178907858 - AluSg1 SINE Alu -25 287 131 249 169 17 51 chr5 24180509 24180568 -178904964 + MLT1H LTR MaLR 102 158 -391 384 193 151 82 chr5 24180612 24180979 -178904553 + MLT1H LTR MaLR 152 563 -4 201 133 0 0 chr5 24182709 24182739 -178902793 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 699 158 108 0 chr5 24183543 24183682 -178901850 - AluSg1 SINE Alu -153 156 3 181 385 13 13 chr5 24184616 24184694 -178900838 + L2 LINE L2 3195 3272 0 2184 109 0 0 chr5 24185236 24185539 -178899993 - AluSc SINE Alu -6 303 1 190 325 92 33 chr5 24185825 24185945 -178899587 - L2 LINE L2 -896 2418 2292 1774 266 101 50 chr5 24185952 24186525 -178899007 + L1MC3 LINE L1 784 1326 -5100 318 26 0 0 chr5 24186525 24186564 -178898968 + (CA)n Simple_repeat Simple_repeat 2 40 0 1774 266 101 50 chr5 24186564 24188203 -178897329 + L1MC3 LINE L1 1326 3310 -3116 1112 221 107 56 chr5 24188249 24188684 -178896848 - MLT2B1 LTR ERVL -8 512 1 530 267 50 50 chr5 24188687 24188945 -178896587 + L1MC3 LINE L1 4354 4611 -1815 1614 274 27 22 chr5 24188975 24189416 -178896116 + L1MC3 LINE L1 4682 5128 -1298 1883 144 45 28 chr5 24189416 24189771 -178895761 - THE1B LTR MaLR -3 361 1 1614 274 27 22 chr5 24189771 24189950 -178895582 + L1MC3 LINE L1 5128 5305 -1121 6909 236 93 37 chr5 24189983 24191501 -178894031 + L1MC3 LINE L1 5287 6717 -1348 204 40 0 0 chr5 24191501 24191526 -178894006 + (TG)n Simple_repeat Simple_repeat 2 26 0 6909 236 93 37 chr5 24191526 24192166 -178893366 + L1MC3 LINE L1 6717 7319 -746 1501 201 82 37 chr5 24192166 24192545 -178892987 - MSTD LTR MaLR 0 396 1 6909 236 93 37 chr5 24192545 24193013 -178892519 + L1MC3 LINE L1 7319 8064 -1 2659 174 8 63 chr5 24193133 24193335 -178892197 + MER41C LTR ERV1 1 212 -342 2234 127 0 0 chr5 24193335 24193634 -178891898 - AluSx SINE Alu -11 301 3 2659 174 8 63 chr5 24193634 24194017 -178891515 + MER41C LTR ERV1 212 554 0 420 261 0 0 chr5 24194147 24194239 -178891293 - MER69 DNA AcHobo 0 2526 2435 403 203 38 0 chr5 24194392 24194471 -178891061 - MER69 DNA AcHobo -2444 82 1 263 357 100 21 chr5 24194545 24194884 -178890648 - L2 LINE L2 -732 2582 2217 188 211 154 0 chr5 24195157 24195209 -178890323 - MIR SINE MIR -94 168 109 2981 196 5 32 chr5 24195369 24195951 -178889581 + L1MB5 LINE L1 5536 6101 -73 2307 97 3 0 chr5 24195951 24196249 -178889283 - AluSp SINE Alu -14 299 1 2981 196 5 32 chr5 24196249 24196295 -178889237 + L1MB5 LINE L1 6101 6147 -27 1472 173 54 26 chr5 24196900 24197455 -178888077 - L1MC3 LINE L1 -2 7783 7077 1426 225 74 64 chr5 24197455 24197957 -178887575 - MER76 LTR ERV -147 541 35 342 237 52 30 chr5 24197962 24198097 -178887435 - L1M4 LINE L1 -2697 3449 3312 193 284 52 69 chr5 24198830 24198946 -178886586 + MER5A DNA MER1_type 70 183 -6 854 217 12 0 chr5 24199669 24199830 -178885702 + FRAM SINE Alu 1 162 -14 294 408 26 64 chr5 24200144 24200471 -178885061 + L2 LINE L2 2700 3016 -297 4129 146 12 1 chr5 24200471 24201142 -178884390 + L1PA15 LINE L1 5488 6165 0 294 408 26 64 chr5 24201142 24201191 -178884341 + L2 LINE L2 3016 3065 -248 324 65 0 0 chr5 24201217 24201263 -178884269 - MADE1 DNA Mariner -34 46 1 1856 234 53 40 chr5 24201324 24201453 -178884079 + LTR53 LTR ERVL 8 134 -385 2081 108 24 0 chr5 24201453 24201750 -178883782 - AluSq SINE Alu -9 304 1 1856 234 53 40 chr5 24201750 24202125 -178883407 + LTR53 LTR ERVL 134 519 0 1652 275 69 36 chr5 24202502 24202748 -178882784 + MLT1E2 LTR MaLR 26 263 -363 2311 58 0 67 chr5 24202748 24203076 -178882456 + AluY SINE Alu 2 307 -4 1652 275 69 36 chr5 24203076 24203411 -178882121 + MLT1E2 LTR MaLR 263 626 0 2262 69 0 3 chr5 24203948 24204237 -178881295 + AluY SINE Alu 1 288 -23 189 0 0 0 chr5 24204244 24204265 -178881267 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 408 145 41 0 chr5 24205125 24205209 -178880323 - L1M1 LINE L1 -618 5547 5452 956 128 14 0 chr5 24205231 24205379 -178880153 + AluSc SINE Alu 156 305 -4 23 0 0 0 chr5 24205385 24205408 -178880124 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 24206060 24206081 -178879451 + AT_rich Low_complexity Low_complexity 1 21 0 771 90 23 45 chr5 24206542 24206675 -178878857 - L1PA16 LINE L1 0 6166 6037 1078 197 14 14 chr5 24206678 24206891 -178878641 - L1PA16 LINE L1 -307 5859 5647 2400 186 14 10 chr5 24206894 24207717 -178877815 + L1PA16 LINE L1 4806 5626 -540 289 247 17 15 chr5 24208164 24208286 -178877246 - L1MC4 LINE L1 0 8042 7701 300 120 0 0 chr5 24208286 24208336 -178877196 + (CA)n Simple_repeat Simple_repeat 2 51 0 230 304 83 0 chr5 24208617 24208785 -178876747 - L1MC4a LINE L1 0 7808 7627 1533 216 62 10 chr5 24208841 24209257 -178876275 - L1MC4a LINE L1 -190 7618 7181 1062 240 146 21 chr5 24210779 24211163 -178874369 + MLT1C LTR MaLR 6 437 -30 1597 235 27 10 chr5 24211168 24211576 -178873956 + MLT1C-int LTR MaLR 19 433 -938 600 277 36 43 chr5 24211729 24211982 -178873550 - MER4B-int LTR ERV1 -2407 4351 4101 2318 85 0 16 chr5 24212356 24212663 -178872869 + AluSx SINE Alu 1 302 -10 210 171 0 0 chr5 24212685 24212720 -178872812 + (TA)n Simple_repeat Simple_repeat 1 35 0 759 190 110 112 chr5 24262930 24263357 -178822175 - L1MC4 LINE L1 -3 8039 7614 27 0 0 0 chr5 24263808 24263835 -178821697 + AT_rich Low_complexity Low_complexity 1 27 0 1605 266 100 21 chr5 24264170 24264699 -178820833 - MLT1E2 LTR MaLR 0 626 56 215 182 0 36 chr5 24265051 24265106 -178820426 + T-rich Low_complexity Low_complexity 2 54 0 2454 54 30 0 chr5 24265292 24265590 -178819942 + AluY SINE Alu 1 307 -4 546 339 9 14 chr5 24265902 24266121 -178819411 + LTR16A LTR ERVL 86 303 -147 6098 164 62 7 chr5 24266121 24267288 -178818244 + Tigger3b DNA MER2_type 1 1231 0 21 36 0 0 chr5 24268331 24268359 -178817173 + AT_rich Low_complexity Low_complexity 1 28 0 2239 239 29 63 chr5 24268575 24269260 -178816272 + LTR8 LTR ERV1 30 691 0 723 368 42 17 chr5 24269749 24270159 -178815373 - LTR16A LTR ERVL -13 437 18 198 103 0 0 chr5 24271086 24271115 -178814417 + (TG)n Simple_repeat Simple_repeat 2 30 0 504 335 30 15 chr5 24271296 24271499 -178814033 - HERVL LTR ERVL -1332 4322 4117 1563 259 38 79 chr5 24271959 24272075 -178813457 + L1MB5 LINE L1 3415 3534 -2612 240 35 0 0 chr5 24272075 24272104 -178813428 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1563 259 38 79 chr5 24272104 24272374 -178813158 + L1MB5 LINE L1 3534 3813 -2333 2129 107 10 10 chr5 24272374 24272683 -178812849 + AluSc SINE Alu 1 309 0 1563 259 38 79 chr5 24272683 24273080 -178812452 + L1MB5 LINE L1 3813 4167 -1979 1569 122 59 105 chr5 24273279 24273629 -178811903 + THE1C LTR MaLR 2 334 -41 2074 128 3 3 chr5 24273629 24273941 -178811591 - AluSx SINE Alu 0 312 1 1569 122 59 105 chr5 24273941 24273982 -178811550 + THE1C LTR MaLR 334 375 0 779 206 29 75 chr5 24274000 24274312 -178811220 + L1MB5 LINE L1 5186 5483 -687 2121 107 10 3 chr5 24274366 24274666 -178810866 + AluSg SINE Alu 1 302 -8 263 311 0 0 chr5 24274760 24274863 -178810669 + L1MA10 LINE L1 6169 6271 -63 1224 93 6 0 chr5 24274864 24275025 -178810507 + AluSg/x SINE Alu 137 298 -14 538 254 43 0 chr5 24276328 24276479 -178809053 - MLT1G1 LTR MaLR 0 595 426 626 226 56 58 chr5 24276492 24276769 -178808763 - MLT1G1 LTR MaLR -277 318 11 2569 208 103 33 chr5 24276937 24277668 -178807864 + LTR48 LTR ERV1 1 782 -5 1936 208 12 12 chr5 24277881 24278169 -178807363 + MER57A LTR ERV1 1 291 -112 3902 136 9 3 chr5 24278169 24278800 -178806732 - MER41B LTR ERV1 0 635 1 1936 208 12 12 chr5 24278800 24278914 -178806618 + MER57A LTR ERV1 290 403 0 200 200 0 22 chr5 24279731 24279776 -178805756 + (TG)n Simple_repeat Simple_repeat 2 45 0 1694 284 98 59 chr5 24280065 24281204 -178804328 + L1ME3A LINE L1 7 1189 -5353 1083 185 83 62 chr5 24281230 24281554 -178803978 + L1MB5 LINE L1 5581 5911 -263 1403 145 63 29 chr5 24281554 24281888 -178803644 - MER4A LTR ERV1 0 664 261 673 111 0 10 chr5 24281888 24281987 -178803545 - MER4A LTR ERV1 -566 98 1 671 261 90 8 chr5 24281987 24282221 -178803311 + L1MB5 LINE L1 5914 6166 -8 576 256 52 24 chr5 24283233 24283522 -178802010 + L1ME3A LINE L1 3370 3666 -2978 * 1307 268 58 60 chr5 24283519 24284603 -178800929 + L1ME3A LINE L1 4862 6664 -4 776 228 18 41 chr5 24284722 24284941 -178800591 + MER20 DNA MER1_type 6 219 0 22 35 0 0 chr5 24285487 24285516 -178800016 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr5 24287675 24287708 -178797824 + AT_rich Low_complexity Low_complexity 1 33 0 405 160 13 0 chr5 24287748 24287823 -178797709 - MADE1 DNA Mariner -4 76 1 556 343 25 21 chr5 24288491 24288777 -178796755 - MLT1J LTR MaLR -224 287 1 1841 150 122 18 chr5 24289090 24289476 -178796056 - MSTA LTR MaLR -2 426 1 207 0 0 0 chr5 24290410 24290433 -178795099 + (CATG)n Simple_repeat Simple_repeat 4 26 0 437 123 27 0 chr5 24290731 24290804 -178794728 - L1M4 LINE L1 -395 5779 5705 1064 211 13 0 chr5 24290812 24291040 -178794492 + L1MB2 LINE L1 5934 6164 -7 213 94 0 0 chr5 24291463 24291495 -178794037 + (TG)n Simple_repeat Simple_repeat 2 33 0 2097 74 32 11 chr5 24292271 24292556 -178792976 - AluY SINE Alu -20 291 1 320 296 17 26 chr5 24292607 24292722 -178792810 - LTR33 LTR ERVL -75 446 333 231 355 16 48 chr5 24292835 24292959 -178792573 - LTR33 LTR ERVL -362 159 40 2249 99 7 0 chr5 24293474 24293777 -178791755 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr5 24293965 24293986 -178791546 + AT_rich Low_complexity Low_complexity 1 21 0 3818 45 31 0 chr5 24294325 24294811 -178790721 + L1PA3 LINE L1 5652 6152 -3 758 274 15 15 chr5 24295457 24295661 -178789871 + MER82 DNA MER2_type 448 651 -2 1643 156 26 7 chr5 24295778 24296048 -178789484 + AluSx SINE Alu 2 276 -36 207 0 0 0 chr5 24296050 24296073 -178789459 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1457 209 66 123 chr5 24296293 24297064 -178788468 + LTR8A LTR ERV1 1 727 0 21 0 0 0 chr5 24297290 24297311 -178788221 + AT_rich Low_complexity Low_complexity 1 21 0 377 238 79 0 chr5 24297429 24297530 -178788002 - MLT1E1 LTR MaLR -463 191 83 746 218 210 33 chr5 24297539 24297805 -178787727 + MLT1E1 LTR MaLR 205 423 -231 1175 203 60 100 chr5 24297805 24298274 -178787258 - LTR7 LTR ERV1 0 450 1 746 218 210 33 chr5 24298274 24298343 -178787189 + MLT1E1 LTR MaLR 423 654 0 1192 205 23 91 chr5 24299158 24299543 -178785989 - MLT1A1 LTR MaLR -3 362 4 234 305 42 84 chr5 24300309 24300548 -178784984 - MLT1H1 LTR MaLR -3 552 324 1191 201 31 20 chr5 24300653 24300946 -178784586 - L1MA9 LINE L1 -38 6274 5979 1501 244 63 6 chr5 24300946 24301311 -178784221 - MSTD LTR MaLR 0 396 11 2476 171 60 105 chr5 24301327 24302041 -178783491 - L1MA9 LINE L1 -335 5977 5296 2319 212 63 49 chr5 24302037 24302819 -178782713 + L1 LINE L1 4461 5253 -893 * 201 215 31 0 chr5 24302917 24302982 -178782550 + (TAAA)n Simple_repeat Simple_repeat 3 69 0 2017 119 6 38 chr5 24303014 24303332 -178782200 - AluSc SINE Alu -1 308 1 730 229 0 0 chr5 24305097 24305237 -178780295 + AluJb SINE Alu 159 298 -14 22 56 0 0 chr5 24306138 24306174 -178779358 + AT_rich Low_complexity Low_complexity 1 36 0 726 153 0 8 chr5 24306430 24306554 -178778978 - L1M2 LINE L1 -695 5617 5495 308 330 59 31 chr5 24306661 24306949 -178778583 + L1M4 LINE L1 4213 4508 -1638 230 261 29 14 chr5 24307015 24307084 -178778448 - LTR34 LTR ERV1 -4 695 626 542 133 19 19 chr5 24307192 24307297 -178778235 - MER4A LTR ERV1 -559 105 1 343 228 76 51 chr5 24307353 24307550 -178777982 + L1M4 LINE L1 4645 4846 -1300 1820 159 44 44 chr5 24307710 24308074 -178777458 + THE1B LTR MaLR 1 364 0 562 323 99 11 chr5 24308429 24308711 -178776821 + L2 LINE L2 2020 2326 -988 1971 182 8 0 chr5 24308712 24309063 -178776469 + MER47A DNA MER2_type 13 366 0 1092 321 124 24 chr5 24309068 24309953 -178775579 + L2 LINE L2 2329 3312 -1 236 91 61 30 chr5 24310163 24310229 -178775303 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 191 86 0 29 chr5 24310391 24310426 -178775106 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1098 214 4 76 chr5 24310528 24310804 -178774728 - AluJo SINE Alu -56 256 1 367 379 35 0 chr5 24311143 24311539 -178773993 + L1ME3A LINE L1 5474 5883 -287 34 24 0 0 chr5 24311861 24311902 -178773630 + AT_rich Low_complexity Low_complexity 1 41 0 763 223 70 9 chr5 24312625 24312840 -178772692 + LTR40a LTR ERVL 1 228 -291 1206 240 101 59 chr5 24312840 24312893 -178772639 + MLT2B1 LTR ERVL 1 50 -470 1878 179 36 0 chr5 24312893 24313229 -178772303 - MER7A DNA MER2_type 0 346 1 1206 240 101 59 chr5 24313229 24313650 -178771882 + MLT2B1 LTR ERVL 50 495 -25 656 233 22 56 chr5 24313701 24313881 -178771651 + LTR40b LTR ERVL 289 462 0 25 51 0 0 chr5 24314389 24314428 -178771104 + AT_rich Low_complexity Low_complexity 1 39 0 1278 215 60 24 chr5 24314435 24314817 -178770715 - L1MC3 LINE L1 -24 7761 7366 985 281 107 28 chr5 24314821 24314847 -178770685 + MLT1D LTR MaLR 2 25 -480 1767 181 33 0 chr5 24314847 24315146 -178770386 + AluJb SINE Alu 1 309 -3 985 281 107 28 chr5 24315146 24315586 -178769946 + MLT1D LTR MaLR 25 505 0 419 162 0 0 chr5 24315594 24315662 -178769870 - L1MC3 LINE L1 -426 7359 7292 14854 229 38 25 chr5 24315665 24316473 -178769059 - L1PA15 LINE L1 -1 6815 6019 1936 108 6 99 chr5 24316473 24316817 -178768715 + AluSx SINE Alu 1 312 0 14854 229 38 25 chr5 24316817 24318899 -178766633 - L1PA15 LINE L1 -797 6019 3965 255 49 0 0 chr5 24318899 24318940 -178766592 - AluY SINE Alu 0 301 261 14854 229 38 25 chr5 24318940 24319170 -178766362 - L1PA15 LINE L1 -2851 3965 3739 2531 43 0 3 chr5 24319170 24319469 -178766063 - AluY SINE Alu -13 298 1 14854 229 38 25 chr5 24319469 24322977 -178762555 - L1PA15 LINE L1 -3077 3739 1 1142 235 65 14 chr5 24322989 24323359 -178762173 - L1MC3 LINE L1 -481 7304 6916 1326 207 4 15 chr5 24323400 24323670 -178761862 - AluJo SINE Alu -13 299 33 675 231 0 7 chr5 24323733 24323876 -178761656 - L1MC3 LINE L1 -954 6831 6690 1219 229 142 30 chr5 24323886 24324525 -178761007 - L1MCa LINE L1 -3947 2479 1847 208 346 0 0 chr5 24324774 24324852 -178760680 - L2 LINE L2 -4 3268 3191 29 47 0 0 chr5 24325456 24325499 -178760033 + AT_rich Low_complexity Low_complexity 1 43 0 276 288 12 56 chr5 24325817 24325977 -178759555 + L1MC4a LINE L1 3784 3936 -2210 188 213 16 0 chr5 24326041 24326102 -178759430 + (TA)n Simple_repeat Simple_repeat 2 63 0 251 277 27 20 chr5 24326367 24326515 -178759017 + (TA)n Simple_repeat Simple_repeat 2 150 0 384 111 33 11 chr5 24326676 24326766 -178758766 + (TTTAA)n Simple_repeat Simple_repeat 4 95 0 21 82 0 0 chr5 24326969 24327018 -178758514 + AT_rich Low_complexity Low_complexity 1 49 0 347 251 72 30 chr5 24327342 24327509 -178758023 + L1MC4a LINE L1 5256 5429 -2379 449 316 157 34 chr5 24327544 24327990 -178757542 + L1MC4a LINE L1 5519 6019 -1789 24 0 0 0 chr5 24328874 24328898 -178756634 + AT_rich Low_complexity Low_complexity 1 24 0 1139 152 87 15 chr5 24329394 24329703 -178755829 - MSTA LTR MaLR 0 428 1 5684 201 24 12 chr5 24329705 24330830 -178754702 - MSTA-int LTR MaLR -2 1578 440 3034 202 12 0 chr5 24330828 24331466 -178754066 - L1 LINE L1 -2150 3996 3351 * 242 311 104 44 chr5 24331806 24331989 -178753543 + L2 LINE L2 3117 3310 -3 2292 113 0 0 chr5 24332789 24333090 -178752442 + AluSc SINE Alu 1 301 -8 1681 161 152 6 chr5 24333726 24334061 -178751471 + MSTA LTR MaLR 1 384 -44 884 234 115 40 chr5 24334087 24334570 -178750962 + L1MC/D LINE L1 4979 5509 -883 1452 152 60 39 chr5 24334570 24334853 -178750679 + AluJb SINE Alu 1 289 -23 884 234 115 40 chr5 24334853 24335000 -178750532 + L1MC/D LINE L1 5509 5643 -749 1586 186 7 0 chr5 24335011 24335332 -178750200 - AluJb SINE Alu 0 323 1 662 203 8 0 chr5 24335348 24335466 -178750066 - FLAM_C SINE Alu -20 123 5 1188 223 38 15 chr5 24335468 24335809 -178749723 - L1 LINE L1 -814 5332 4984 2266 113 96 25 chr5 24335853 24336251 -178749281 + MSTA LTR MaLR 1 426 -2 268 241 0 0 chr5 24336607 24336665 -178748867 + L1PA12 LINE L1 2125 2182 -5399 685 281 41 0 chr5 24336942 24337188 -178748344 + L1PA12 LINE L1 2256 2511 -5070 2205 116 0 19 chr5 24339998 24340309 -178745223 - AluSp SINE Alu -8 305 1 1811 132 26 0 chr5 24340311 24340576 -178744956 - AluSx SINE Alu -10 302 31 411 21 0 0 chr5 24340576 24340624 -178744908 + (ATG)n Simple_repeat Simple_repeat 2 49 0 966 157 0 0 chr5 24340639 24340779 -178744753 - FRAM SINE Alu -31 145 6 1806 135 0 44 chr5 24340812 24341108 -178744424 + AluSx SINE Alu 1 283 -29 2020 147 13 13 chr5 24341282 24341594 -178743938 - AluSx SINE Alu 0 312 1 3154 164 25 21 chr5 24342567 24343195 -178742337 - L1MB2 LINE L1 -2 6169 5539 1657 193 25 17 chr5 24343195 24343548 -178741984 + MSTD LTR MaLR 3 358 -38 2184 119 3 0 chr5 24343548 24343851 -178741681 + AluSg SINE Alu 1 304 -6 252 200 0 0 chr5 24343864 24343919 -178741613 + MSTD LTR MaLR 342 396 0 4730 205 7 25 chr5 24343919 24344142 -178741390 - L1MB2 LINE L1 -626 5545 5319 1202 201 12 115 chr5 24344142 24344405 -178741127 - MLT1A2 LTR MaLR 0 374 168 1901 115 39 14 chr5 24344405 24344691 -178740841 - AluSx SINE Alu -19 293 1 1202 201 12 115 chr5 24344691 24344844 -178740688 - MLT1A2 LTR MaLR -206 168 1 4730 205 7 25 chr5 24344844 24344915 -178740617 - L1MB2 LINE L1 -852 5319 5248 2305 91 0 3 chr5 24344915 24345213 -178740319 - AluSq SINE Alu -16 297 1 4730 205 7 25 chr5 24345213 24345225 -178740307 - L1MB2 LINE L1 -923 5248 5237 625 208 15 8 chr5 24345225 24345355 -178740177 - FLAM_A SINE Alu -2 131 1 4730 205 7 25 chr5 24345355 24346333 -178739199 - L1MB2 LINE L1 -934 5237 4286 2304 84 0 0 chr5 24346333 24346620 -178738912 - AluY SINE Alu -24 287 1 4730 205 7 25 chr5 24346620 24346665 -178738867 - L1MB2 LINE L1 -1885 4286 4242 1236 99 0 0 chr5 24346668 24346830 -178738702 - AluSg/x SINE Alu -12 298 137 1608 64 0 68 chr5 24346935 24347155 -178738377 + AluY SINE Alu 96 300 -11 270 238 12 0 chr5 24347163 24347243 -178738289 - L1MB2 LINE L1 -2126 4020 3940 2169 114 0 3 chr5 24347487 24347795 -178737737 + AluSx SINE Alu 1 307 -5 437 254 17 66 chr5 24348120 24348293 -178737239 - MIR SINE MIR -37 225 68 1828 170 0 0 chr5 24349058 24349341 -178736191 - AluJb SINE Alu -27 285 3 1946 118 35 7 chr5 24349354 24349642 -178735890 - AluSq SINE Alu -15 298 3 2202 119 3 0 chr5 24349864 24350167 -178735365 + AluSq SINE Alu 3 306 -7 2186 133 0 0 chr5 24350185 24350487 -178735045 + AluSx SINE Alu 3 304 -8 1906 141 7 7 chr5 24351456 24351739 -178733793 - AluSx SINE Alu -29 283 1 297 331 83 0 chr5 24351745 24351878 -178733654 + MIR SINE MIR 1 144 -118 236 321 12 12 chr5 24352059 24352143 -178733389 + L2 LINE L2 3230 3313 0 22 56 0 0 chr5 24353610 24353646 -178731886 + AT_rich Low_complexity Low_complexity 1 36 0 442 308 151 19 chr5 24355022 24355347 -178730185 - L2 LINE L2 -25 3288 2921 229 299 143 7 chr5 24355405 24355552 -178729980 - L2 LINE L2 -690 2624 2458 181 262 36 48 chr5 24355679 24355763 -178729769 + L2 LINE L2 3184 3266 -6 3651 67 21 18 chr5 24358635 24359146 -178726386 - LTR10D LTR ERV1 0 513 1 195 266 0 0 chr5 24359147 24359211 -178726321 + (TG)n Simple_repeat Simple_repeat 2 65 0 1070 165 97 0 chr5 24359748 24359954 -178725578 - LTR10D-int LTR ERV1 -62 4874 4649 767 126 74 7 chr5 24359954 24360089 -178725443 - LTR23 LTR ERV1 -293 144 1 562 91 0 0 chr5 24360237 24360314 -178725218 - PABL_B LTR ERV1 0 667 591 5567 197 42 13 chr5 24360315 24362517 -178723015 + L1MA5 LINE L1 4042 6300 0 1069 92 1 6 chr5 24363112 24363285 -178722247 + L1P5 LINE L1 5425 5598 -553 262 320 172 34 chr5 24363518 24363809 -178721723 - L2 LINE L2 -92 3221 2891 372 282 0 0 chr5 24363909 24363994 -178721538 - L2 LINE L2 -611 2703 2619 423 356 20 0 chr5 24365649 24365795 -178719737 - MIR SINE MIR -12 250 102 577 152 10 0 chr5 24366824 24366923 -178718609 + MLT1C LTR MaLR 1 100 -367 29 28 0 0 chr5 24368219 24368255 -178717277 + AT_rich Low_complexity Low_complexity 1 36 0 1956 136 9 9 chr5 24368290 24368614 -178716918 - L1PA14 LINE L1 -2 6159 5836 225 351 98 57 chr5 24369959 24370642 -178714890 + L2 LINE L2 958 1668 -1646 292 325 64 32 chr5 24370931 24371088 -178714444 + L2 LINE L2 2622 2783 -531 2020 121 3 51 chr5 24371947 24372121 -178713411 - AluSq SINE Alu -11 302 148 1947 126 36 0 chr5 24372121 24372422 -178713110 - AluSx SINE Alu 0 312 1 2020 121 3 51 chr5 24372422 24372562 -178712970 - AluSq SINE Alu -165 148 3 27 29 0 0 chr5 24372962 24372996 -178712536 + AT_rich Low_complexity Low_complexity 1 34 0 10710 245 38 40 chr5 24372996 24374092 -178711440 - L1PA14 LINE L1 -5 7594 6497 1796 173 7 3 chr5 24374092 24374387 -178711145 - AluSx SINE Alu -16 296 1 10710 245 38 40 chr5 24374387 24376403 -178709129 - L1PA14 LINE L1 -1102 6497 4504 2126 116 3 16 chr5 24376403 24376714 -178708818 - AluSp SINE Alu -6 307 1 10710 245 38 40 chr5 24376714 24378391 -178707141 - L1PA14 LINE L1 -3095 4504 2825 423 0 0 0 chr5 24378863 24378910 -178706622 + (CA)n Simple_repeat Simple_repeat 2 48 0 37 52 0 0 chr5 24378935 24378993 -178706539 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr5 24379115 24379137 -178706395 + AT_rich Low_complexity Low_complexity 1 22 0 3060 183 32 32 chr5 24379877 24380527 -178705005 + MER39B LTR ERV1 1 650 -3 242 275 78 82 chr5 24380865 24381291 -178704241 + L1M4 LINE L1 4634 5057 -1089 22 0 0 0 chr5 24381392 24381414 -178704118 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 24382404 24382426 -178703106 + AT_rich Low_complexity Low_complexity 1 22 0 38 22 0 0 chr5 24382690 24382735 -178702797 + AT_rich Low_complexity Low_complexity 1 45 0 4953 162 21 14 chr5 24382751 24383891 -178701641 - L1PA15 LINE L1 -17 6148 5005 1995 120 17 3 chr5 24383912 24384212 -178701320 + AluSc SINE Alu 1 304 -5 286 282 0 0 chr5 24384690 24384761 -178700771 + L1MEc LINE L1 1664 1734 -4662 333 47 0 0 chr5 24385844 24385887 -178699645 + (CA)n Simple_repeat Simple_repeat 1 43 0 236 250 14 14 chr5 24386874 24386946 -178698586 + (TA)n Simple_repeat Simple_repeat 2 73 0 22 0 0 0 chr5 24388736 24388758 -178696774 + AT_rich Low_complexity Low_complexity 1 22 0 627 144 18 0 chr5 24389431 24389542 -178695990 - L1MB4 LINE L1 -2 6178 6066 1797 139 3 52 chr5 24389552 24389736 -178695796 + AluJo SINE Alu 2 167 -145 366 23 0 0 chr5 24389736 24389779 -178695753 + (TG)n Simple_repeat Simple_repeat 1 43 0 1797 139 3 52 chr5 24389779 24389903 -178695629 + AluJo SINE Alu 167 295 -17 26 30 0 0 chr5 24389913 24389946 -178695586 + AT_rich Low_complexity Low_complexity 1 33 0 231 103 0 0 chr5 24390113 24390152 -178695380 + (CA)n Simple_repeat Simple_repeat 2 40 0 279 294 0 12 chr5 24390353 24390438 -178695094 + CT-rich Low_complexity Low_complexity 3 86 0 456 274 26 7 chr5 24390849 24391002 -178694530 - L1ME3A LINE L1 -14 6156 6001 458 68 41 14 chr5 24391223 24391296 -178694236 + MADE1 DNA Mariner 6 80 0 270 161 25 37 chr5 24391470 24391536 -178693996 + (TA)n Simple_repeat Simple_repeat 2 68 -13 180 0 0 0 chr5 24391536 24391556 -178693976 + (TG)n Simple_repeat Simple_repeat 2 21 0 270 161 25 37 chr5 24391556 24391570 -178693962 + (TA)n Simple_repeat Simple_repeat 68 81 0 228 172 0 0 chr5 24392250 24392308 -178693224 + (TG)n Simple_repeat Simple_repeat 2 59 0 562 339 149 45 chr5 24392539 24393209 -178692323 + L1M4c LINE L1 1093 1984 -4552 1023 299 60 37 chr5 24393406 24393708 -178691824 + L1MCb LINE L1 1 322 -5723 1998 60 38 88 chr5 24393708 24394026 -178691506 - AluSq SINE Alu -11 302 1 1023 299 60 37 chr5 24394026 24394258 -178691274 + L1MCb LINE L1 322 547 -5498 1317 183 15 74 chr5 24394305 24394643 -178690889 + L1MA10 LINE L1 6016 6333 -1 655 258 90 39 chr5 24394677 24394910 -178690622 + L1MCb LINE L1 552 796 -5249 23 54 0 0 chr5 24394993 24395030 -178690502 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr5 24395501 24395525 -178690007 + AT_rich Low_complexity Low_complexity 1 24 0 5744 219 46 76 chr5 24395572 24396734 -178688798 - L1MC3 LINE L1 0 7793 6826 1931 152 152 8 chr5 24396734 24397108 -178688424 + MSTA LTR MaLR 1 428 0 5744 219 46 76 chr5 24397108 24398067 -178687465 - L1MC3 LINE L1 -967 6826 5840 538 157 43 9 chr5 24398084 24398199 -178687333 - L1MB4 LINE L1 -1 6179 6061 420 278 25 101 chr5 24398245 24398522 -178687010 + L2 LINE L2 3041 3296 -17 1848 125 10 35 chr5 24399485 24399807 -178685725 + AluSx SINE Alu 1 315 0 21 0 0 0 chr5 24400513 24400534 -178684998 + AT_rich Low_complexity Low_complexity 1 21 0 31 82 0 0 chr5 24400841 24400914 -178684618 + AT_rich Low_complexity Low_complexity 1 73 0 2076 139 3 0 chr5 24401006 24401309 -178684223 + AluSq SINE Alu 1 304 -9 212 0 0 35 chr5 24401312 24401341 -178684191 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1970 71 0 97 chr5 24401792 24402139 -178683393 + AluY SINE Alu 1 317 0 908 308 99 47 chr5 24402858 24403332 -178682200 + L2 LINE L2 2568 3016 -297 396 0 0 0 chr5 24403332 24403376 -178682156 + (TG)n Simple_repeat Simple_repeat 2 45 0 908 308 99 47 chr5 24403376 24403392 -178682140 + L2 LINE L2 3016 3030 -283 2208 135 0 29 chr5 24403392 24403716 -178681816 - L1PB4 LINE L1 -2 6154 5822 207 0 0 0 chr5 24403716 24403739 -178681793 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1918 108 0 0 chr5 24403741 24404000 -178681532 - AluSc SINE Alu -30 279 21 2208 135 0 29 chr5 24404000 24404046 -178681486 - L1PB4 LINE L1 -335 5821 5790 443 33 16 0 chr5 24404046 24404107 -178681425 + (TA)n Simple_repeat Simple_repeat 1 62 0 908 308 99 47 chr5 24404117 24404314 -178681218 + L2 LINE L2 3030 3282 -31 1858 204 22 3 chr5 24404883 24405241 -178680291 - MLT1A1 LTR MaLR 0 365 1 28 29 0 0 chr5 24405616 24405651 -178679881 + AT_rich Low_complexity Low_complexity 1 35 0 1498 217 22 22 chr5 24407601 24407965 -178677567 - MLT1A1 LTR MaLR 0 365 2 216 256 26 13 chr5 24409633 24409711 -178675821 + (AATAG)n Simple_repeat Simple_repeat 4 82 0 477 230 40 6 chr5 24410632 24410769 -178674763 + L1MC4 LINE L1 6848 7042 -810 430 291 158 0 chr5 24411229 24411432 -178674100 + MIR SINE MIR 12 246 -16 222 342 107 25 chr5 24411444 24411640 -178673892 - MIR SINE MIR -2 260 49 22 0 0 0 chr5 24415461 24415483 -178670049 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr5 24416421 24416473 -178669059 + AT_rich Low_complexity Low_complexity 1 52 0 21 36 0 0 chr5 24416896 24416924 -178668608 + AT_rich Low_complexity Low_complexity 1 28 0 442 332 49 40 chr5 24416931 24417157 -178668375 + MIR SINE MIR 5 232 -30 216 296 112 51 chr5 24417467 24417663 -178667869 + MIR SINE MIR 25 232 -30 260 363 38 25 chr5 24418276 24418433 -178667099 + L2 LINE L2 2865 3023 -290 1636 281 45 37 chr5 24419431 24420003 -178665529 - MLT1E LTR MaLR 0 593 17 3451 127 14 5 chr5 24420003 24420590 -178664942 + L1PB1 LINE L1 5582 6173 0 392 350 33 47 chr5 24420626 24420926 -178664606 + L2 LINE L2 2867 3162 -151 2986 168 29 20 chr5 24421701 24421740 -178663792 - MLT2B3 LTR ERVL 0 554 517 589 58 23 0 chr5 24421740 24421826 -178663706 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 2986 168 29 20 chr5 24421826 24422335 -178663197 - MLT2B3 LTR ERVL -37 517 1 248 231 42 28 chr5 24422449 24422592 -178662940 + L1M4 LINE L1 2146 2290 -3856 236 274 94 9 chr5 24422654 24422760 -178662772 - LTR50 LTR ERVL -61 734 620 381 286 16 0 chr5 24423050 24423176 -178662356 - ERVL LTR ERVL -1731 4033 3906 33 0 0 0 chr5 24423252 24423285 -178662247 + AT_rich Low_complexity Low_complexity 1 33 0 301 270 115 27 chr5 24424879 24425136 -178660396 - L1M4 LINE L1 -1068 5078 4802 418 308 84 41 chr5 24425200 24425593 -178659939 - L1M4 LINE L1 -2449 3697 3288 45 19 0 0 chr5 24426118 24426170 -178659362 + AT_rich Low_complexity Low_complexity 1 52 0 30 89 0 0 chr5 24426239 24426318 -178659214 + AT_rich Low_complexity Low_complexity 1 79 0 348 351 86 34 chr5 24426572 24426897 -178658635 + L1MEc LINE L1 92 433 -5963 2065 135 0 3 chr5 24426973 24427284 -178658248 - AluSg SINE Alu 0 310 1 1003 208 63 4 chr5 24427457 24427726 -178657806 - L1MA7 LINE L1 0 6291 6007 1271 276 70 37 chr5 24427733 24427989 -178657543 + L1MEc LINE L1 1866 2112 -4103 392 66 0 16 chr5 24427989 24428050 -178657482 + (TA)n Simple_repeat Simple_repeat 2 61 0 2189 171 18 0 chr5 24428051 24428432 -178657100 + MLT1B LTR MaLR 3 390 0 1271 276 70 37 chr5 24428432 24428967 -178656565 + L1MEc LINE L1 2112 2672 -3543 1141 259 7 20 chr5 24428967 24429272 -178656260 + AluJo SINE Alu 2 302 0 1271 276 70 37 chr5 24429272 24429652 -178655880 + L1MEc LINE L1 2672 3038 -3177 351 0 0 0 chr5 24429776 24429815 -178655717 + (TG)n Simple_repeat Simple_repeat 2 40 0 30 27 0 0 chr5 24429815 24429852 -178655680 + AT_rich Low_complexity Low_complexity 1 37 0 2655 82 132 7 chr5 24429852 24430255 -178655277 - L1PA8A LINE L1 -10 6121 5669 1944 100 36 0 chr5 24430253 24430606 -178654926 + L1PA8A LINE L1 5086 5448 -683 * 873 291 73 17 chr5 24430609 24431141 -178654391 + L1MEc LINE L1 3362 3923 -2292 1755 206 39 157 chr5 24431148 24431539 -178653993 + L1PB3 LINE L1 5458 5893 -261 519 49 25 62 chr5 24431539 24431620 -178653912 + MADE1 DNA Mariner 1 78 -2 1755 206 39 157 chr5 24431620 24431886 -178653646 + L1PB3 LINE L1 5893 6009 -145 2141 63 19 51 chr5 24431886 24432201 -178653331 + AluY SINE Alu 1 305 -6 1755 206 39 157 chr5 24432201 24432332 -178653200 + L1PB3 LINE L1 6009 6154 0 594 290 109 19 chr5 24432337 24432713 -178652819 + L1MEc LINE L1 3908 4317 -1898 393 306 36 30 chr5 24432716 24433053 -178652479 + L1MEc LINE L1 4335 4673 -1542 23 33 0 0 chr5 24435671 24435701 -178649831 + AT_rich Low_complexity Low_complexity 1 30 0 204 266 57 65 chr5 24436112 24436236 -178649296 - L2 LINE L2 -54 3259 3137 2404 65 0 23 chr5 24436903 24437212 -178648320 + AluSc SINE Alu 1 302 -7 46 45 0 0 chr5 24438189 24438256 -178647276 + AT_rich Low_complexity Low_complexity 1 67 0 5888 175 39 36 chr5 24438256 24440764 -178644768 - L1MA2 LINE L1 0 7723 5229 1687 212 59 29 chr5 24440764 24441304 -178644228 - MLT2A2 LTR ERVL 0 554 1 1816 152 58 19 chr5 24441313 24441674 -178643858 - THE1C LTR MaLR 0 375 1 4541 136 48 11 chr5 24441685 24442412 -178643120 - THE1C-int LTR MaLR -12 1568 815 4023 185 28 5 chr5 24442417 24443535 -178641997 - L1MA2 LINE L1 -3259 4306 2066 1661 204 29 66 chr5 24443535 24443977 -178641555 + MSTB LTR MaLR 1 426 0 5856 218 24 3 chr5 24443977 24445191 -178640341 + MSTB-int LTR MaLR 1 1239 -412 1707 134 4 0 chr5 24445191 24445445 -178640087 - MER51B LTR ERV1 0 377 123 189 0 0 0 chr5 24445545 24445566 -178639966 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3543 83 16 16 chr5 24445567 24446071 -178639461 - L1PA7 LINE L1 -13 6141 5638 3857 62 10 2 chr5 24447255 24447753 -178637779 - L1PA5 LINE L1 -2 6152 5651 915 56 8 8 chr5 24447753 24447879 -178637653 + L1P LINE L1 4464 4589 -1557 1146 97 11 28 chr5 24448377 24448553 -178636979 + AluY SINE Alu 1 173 -138 946 99 0 0 chr5 24448649 24448780 -178636752 + AluY SINE Alu 173 303 -8 646 130 0 0 chr5 24449970 24450070 -178635462 - L1PA5 LINE L1 -632 5534 5435 5083 211 184 23 chr5 24450070 24451352 -178634180 + MER52A LTR ERV1 1 1488 -267 2408 43 7 10 chr5 24451492 24451796 -178633736 + AluY SINE Alu 5 307 -4 180 0 0 0 chr5 24451833 24451853 -178633679 + (CAA)n Simple_repeat Simple_repeat 2 21 0 258 317 16 24 chr5 24454546 24454669 -178630863 + L1ME LINE L1 290 411 -5659 3910 140 102 25 chr5 24455237 24456278 -178629254 + pTR5 LTR ERV1 1065 2606 0 2547 123 0 3 chr5 24456526 24456891 -178628641 + THE1B LTR MaLR 1 364 0 1148 225 126 30 chr5 24457716 24458049 -178627483 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr5 24459522 24459543 -178625989 + (TA)n Simple_repeat Simple_repeat 1 21 0 201 370 49 0 chr5 24460606 24460687 -178624845 + L2 LINE L2 2932 3016 -297 516 215 8 8 chr5 24460851 24460972 -178624560 + MSTB-int LTR MaLR 1530 1650 -1 1551 241 66 3 chr5 24460973 24461354 -178624178 + MSTB LTR MaLR 1 405 -21 246 319 32 0 chr5 24461790 24461884 -178623648 - HAL1b LINE L1 -975 373 277 2100 129 3 7 chr5 24462226 24462536 -178622996 - AluSq SINE Alu 0 313 5 3755 117 28 3 chr5 24462790 24463355 -178622177 - LTR19B LTR ERV1 -1 579 1 297 208 0 0 chr5 24463903 24463975 -178621557 + (TA)n Simple_repeat Simple_repeat 2 73 0 325 287 0 0 chr5 24463978 24464065 -178621467 + L1MC4 LINE L1 6615 6701 -1341 * 338 293 40 10 chr5 24463987 24464086 -178621446 - L1MC4 LINE L1 -1337 6705 6604 22 0 0 0 chr5 24464261 24464283 -178621249 + AT_rich Low_complexity Low_complexity 1 22 0 1536 113 14 102 chr5 24464424 24464707 -178620825 - AluSx SINE Alu -25 287 30 1140 187 4 41 chr5 24465345 24465612 -178619920 - pTR5 LTR ERV1 -1441 997 741 733 25 50 118 chr5 24465818 24465937 -178619595 - HERVK14 LTR ERVK 0 5945 5835 326 191 0 20 chr5 24465937 24466007 -178619525 - MER41C LTR ERV1 -493 61 6 3460 53 6 4 chr5 24466007 24466685 -178618847 - HERVK3 LTR ERVK -181 5764 5013 678 108 0 0 chr5 24466684 24466777 -178618755 - HERVK3 LTR ERVK -1545 4400 4308 * 288 91 254 0 chr5 24466995 24467050 -178618482 - HERVK3 LTR ERVK -7025 218 150 200 203 27 54 chr5 24467057 24467131 -178618401 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 3225 101 37 0 chr5 24467794 24468249 -178617283 - HERVK3 LTR ERVK -3769 2176 1705 5397 70 1 10 chr5 24468283 24468988 -178616544 - HERVK3 LTR ERVK -5246 699 1 2107 99 84 51 chr5 24468988 24469387 -178616145 - LTR14B LTR ERVK 0 608 3 1364 66 61 20 chr5 24469951 24470147 -178615385 - AluY SINE Alu 0 311 108 471 274 116 4 chr5 24471016 24471257 -178614275 + L1PA16 LINE L1 8 275 -7306 4066 141 21 20 chr5 24471259 24471968 -178613564 - MER50 LTR ERV1 -24 710 1 246 311 94 80 chr5 24471968 24472533 -178612999 + L1PA16 LINE L1 272 844 -6737 * 819 291 35 43 chr5 24472520 24472888 -178612644 + L1PA16 LINE L1 1817 2181 -5400 4278 240 34 43 chr5 24473073 24475269 -178610263 + L1PA16 LINE L1 2318 4531 -3053 4300 170 56 49 chr5 24475292 24476325 -178609207 + L1PA16 LINE L1 6185 7223 -381 293 49 49 16 chr5 24476325 24476386 -178609146 + (TA)n Simple_repeat Simple_repeat 1 63 0 4300 170 56 49 chr5 24476386 24476765 -178608767 + L1PA16 LINE L1 7223 7598 -6 1828 181 18 64 chr5 24478560 24479013 -178606519 + MER31A LTR ERV1 1 432 -53 23 33 0 0 chr5 24479514 24479544 -178605988 + AT_rich Low_complexity Low_complexity 1 30 0 35 98 0 0 chr5 24479658 24479770 -178605762 + AT_rich Low_complexity Low_complexity 1 112 0 1942 129 16 13 chr5 24480023 24480332 -178605200 - AluSx SINE Alu -2 310 1 2151 117 0 3 chr5 24480385 24480683 -178604849 - AluSg SINE Alu -13 297 1 545 274 55 92 chr5 24481015 24481395 -178604137 + L2 LINE L2 2945 3310 -3 924 190 11 17 chr5 24483119 24483298 -178602234 + MER52A LTR ERV1 1578 1755 0 3379 193 38 22 chr5 24483298 24484203 -178601329 - L1P4 LINE L1 -728 5438 4533 3011 161 72 2 chr5 24484204 24484774 -178600758 + L1PA16 LINE L1 5547 6156 -10 414 100 0 0 chr5 24484774 24484834 -178600698 + (TA)n Simple_repeat Simple_repeat 1 60 0 238 155 10 117 chr5 24484853 24484912 -178600620 + L1MA8 LINE L1 6180 6225 -66 2175 110 0 10 chr5 24484912 24485213 -178600319 + AluSx SINE Alu 1 298 -14 238 155 10 117 chr5 24485213 24485256 -178600276 + L1MA8 LINE L1 6225 6271 -20 28 0 0 0 chr5 24485273 24485301 -178600231 + AT_rich Low_complexity Low_complexity 1 28 0 614 316 10 0 chr5 24486048 24486257 -178599275 + L1MEc LINE L1 112 322 -6074 1065 193 24 58 chr5 24486268 24486563 -178598969 + L1MEc LINE L1 646 930 -5466 782 298 114 19 chr5 24486659 24487341 -178598191 + L1MEc LINE L1 1115 1861 -4535 483 295 73 91 chr5 24487713 24488274 -178597258 - L2 LINE L2 -67 3246 2687 440 329 20 63 chr5 24488379 24488631 -178596901 - LTR33 LTR ERVL -280 241 1 185 356 69 0 chr5 24488632 24488719 -178596813 + L2 LINE L2 3186 3278 -35 210 363 0 0 chr5 24489036 24489116 -178596416 + L2 LINE L2 3226 3305 -8 2494 44 0 0 chr5 24489183 24489478 -178596054 + AluY SINE Alu 1 295 -16 28 29 0 0 chr5 24490252 24490287 -178595245 + AT_rich Low_complexity Low_complexity 1 35 0 30 59 0 0 chr5 24491197 24491248 -178594284 + AT_rich Low_complexity Low_complexity 1 51 0 377 318 71 6 chr5 24491275 24491445 -178594087 - MIR SINE MIR -74 188 8 1518 121 45 28 chr5 24492325 24492615 -178592917 - L1PA11 LINE L1 0 6174 5880 470 81 0 0 chr5 24492615 24492677 -178592855 + L1P4 LINE L1 5586 5647 -527 741 267 180 66 chr5 24492883 24493310 -178592222 + MLT2F LTR ERVL 186 661 -2 26 50 0 0 chr5 24494058 24494098 -178591434 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 24494315 24494346 -178591186 + AT_rich Low_complexity Low_complexity 1 31 0 2056 134 7 3 chr5 24494925 24495230 -178590302 - AluSg SINE Alu -4 306 1 21 82 0 0 chr5 24495580 24495629 -178589903 + AT_rich Low_complexity Low_complexity 1 49 0 387 296 195 6 chr5 24495756 24495915 -178589617 - MER5A DNA MER1_type 0 189 1 360 231 44 0 chr5 24496036 24496127 -178589405 - MIR SINE MIR -57 205 111 257 288 0 0 chr5 24497140 24497213 -178588319 + L1MDa LINE L1 70 142 -6398 2460 42 13 7 chr5 24497324 24497633 -178587899 - AluY SINE Alu 0 311 1 186 43 0 0 chr5 24497713 24497736 -178587796 + (GA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 24498161 24498183 -178587349 + AT_rich Low_complexity Low_complexity 1 22 0 1774 135 54 14 chr5 24498361 24498658 -178586874 - AluSg SINE Alu -1 309 1 24 0 0 0 chr5 24498959 24498983 -178586549 + AT_rich Low_complexity Low_complexity 1 24 0 661 285 0 22 chr5 24499162 24499341 -178586191 + MIR SINE MIR 32 206 -56 520 231 240 4 chr5 24499558 24499600 -178585932 - MLT1E1 LTR MaLR -5 649 618 195 42 0 0 chr5 24499600 24499624 -178585908 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 520 231 240 4 chr5 24499624 24499931 -178585601 - MLT1E1 LTR MaLR -36 618 178 304 235 94 0 chr5 24499958 24500043 -178585489 - MLT1E1 LTR MaLR -557 97 5 992 258 79 170 chr5 24500075 24501229 -178584303 - MLT1E1-int LTR MaLR -30 1341 293 307 293 57 13 chr5 24501234 24501391 -178584141 - MLT1E1-int LTR MaLR -1207 164 1 766 327 8 4 chr5 24501402 24501665 -178583867 - MLT1E1 LTR MaLR -8 646 383 703 286 73 8 chr5 24501715 24501960 -178583572 - MLT1E1 LTR MaLR -393 261 1 478 273 121 0 chr5 24502234 24502399 -178583133 + L1ME3A LINE L1 5651 5835 -335 1063 197 75 0 chr5 24502789 24503010 -178582522 + MLT1B LTR MaLR 3 240 -150 2276 197 58 4 chr5 24503010 24503493 -178582039 - LTR22 LTR ERVK 0 509 1 844 206 0 7 chr5 24503495 24503650 -178581882 + MLT1B LTR MaLR 236 389 -1 323 250 134 58 chr5 24503651 24503823 -178581709 + L2 LINE L2 3129 3313 0 192 111 0 0 chr5 24504113 24504149 -178581383 + (TG)n Simple_repeat Simple_repeat 2 37 0 2046 127 7 0 chr5 24504409 24504717 -178580815 - AluSg SINE Alu 0 310 1 181 288 30 0 chr5 24506015 24506081 -178579451 + MIR SINE MIR 74 141 -121 25 0 0 0 chr5 24506141 24506166 -178579366 + AT_rich Low_complexity Low_complexity 1 25 0 268 356 55 12 chr5 24506918 24507081 -178578451 - MIR SINE MIR -44 218 49 213 39 0 0 chr5 24507820 24507846 -178577686 + (T)n Simple_repeat Simple_repeat 1 26 0 1710 118 24 0 chr5 24507846 24508092 -178577440 - AluSg SINE Alu -54 256 5 23 68 0 0 chr5 24508179 24508223 -178577309 + AT_rich Low_complexity Low_complexity 1 44 0 407 319 39 48 chr5 24508290 24508519 -178577013 - MIR SINE MIR -28 234 8 292 317 88 19 chr5 24509021 24509226 -178576306 - L2 LINE L2 -151 3162 2944 23 33 0 0 chr5 24509575 24509605 -178575927 + AT_rich Low_complexity Low_complexity 1 30 0 763 184 68 21 chr5 24511370 24511560 -178573972 + MER57-int LTR ERV1 5622 5820 -1717 5378 228 31 21 chr5 24511879 24513181 -178572351 + MER57-int LTR ERV1 5824 7137 -400 661 153 32 8 chr5 24513187 24513311 -178572221 + LTR54B LTR ERV1 1 127 -371 2230 116 0 0 chr5 24515819 24516121 -178569411 - AluSx SINE Alu -10 302 1 246 229 0 0 chr5 24516206 24516254 -178569278 + L1PA12 LINE L1 8 55 -7526 1282 281 133 8 chr5 24518010 24518523 -178567009 + MER119 DNA MER1_type 7 583 0 235 335 129 31 chr5 24518523 24518717 -178566815 + MIR SINE MIR 24 236 -26 30 83 0 0 chr5 24519269 24519341 -178566191 + AT_rich Low_complexity Low_complexity 1 72 0 31 26 0 0 chr5 24520185 24520223 -178565309 + AT_rich Low_complexity Low_complexity 1 38 0 2009 151 0 0 chr5 24520272 24520577 -178564955 - AluSx SINE Alu -7 305 1 525 280 89 48 chr5 24520733 24521004 -178564528 + L1MD2 LINE L1 5860 6141 -218 302 343 22 14 chr5 24521013 24521159 -178564373 + L1MC4a LINE L1 6202 7807 -1 27 49 0 0 chr5 24521767 24521808 -178563724 + AT_rich Low_complexity Low_complexity 1 41 0 2262 93 0 0 chr5 24521854 24522145 -178563387 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 24522159 24522187 -178563345 + AT_rich Low_complexity Low_complexity 1 28 0 207 205 39 13 chr5 24522725 24522803 -178562729 + (TA)n Simple_repeat Simple_repeat 2 81 0 2300 59 10 3 chr5 24522932 24523220 -178562312 + AluY SINE Alu 3 292 -19 699 230 40 50 chr5 24523694 24523894 -178561638 + MER49 LTR ERV1 1 198 -725 252 297 11 0 chr5 24523900 24523991 -178561541 - L1MC4 LINE L1 -1339 6703 6612 234 205 84 12 chr5 24523921 24524004 -178561528 + L1MC4 LINE L1 6615 6703 -1339 * 378 177 0 13 chr5 24524014 24524093 -178561439 + MER49 LTR ERV1 185 262 -661 1208 274 20 15 chr5 24524134 24524477 -178561055 + MER4D LTR ERV1 549 893 -10 2083 149 0 0 chr5 24525429 24525772 -178559760 - AluSx SINE Alu 0 312 4 247 321 9 18 chr5 24526026 24526135 -178559397 - MER34 LTR ERV1 -3 539 432 211 229 0 0 chr5 24526797 24526845 -178558687 + (TA)n Simple_repeat Simple_repeat 1 48 0 304 299 65 60 chr5 24527234 24527418 -178558114 + L1MEd LINE L1 1011 1195 -4924 269 301 27 75 chr5 24527671 24527857 -178557675 - L2 LINE L2 -25 3288 3112 1387 201 28 45 chr5 24528039 24528392 -178557140 - MLT1A1 LTR MaLR -15 350 4 674 284 111 24 chr5 24528393 24528734 -178556798 + MLT1G LTR MaLR 136 506 -84 236 303 0 0 chr5 24529344 24529410 -178556122 + HAL1b LINE L1 421 486 -862 525 140 11 5 chr5 24529513 24529604 -178555928 + MSTB LTR MaLR 2 82 -344 496 196 20 10 chr5 24529612 24529714 -178555818 + L1PB4 LINE L1 5687 5789 -367 232 186 0 0 chr5 24529720 24529763 -178555769 + L1MC4 LINE L1 6658 6700 -1342 301 283 18 26 chr5 24529784 24529897 -178555635 - L1MC4 LINE L1 -1339 6703 6592 672 111 16 47 chr5 24529927 24530185 -178555347 + (TA)n Simple_repeat Simple_repeat 1 249 0 251 209 0 50 chr5 24530212 24530351 -178555181 + (TA)n Simple_repeat Simple_repeat 1 132 0 1874 162 11 35 chr5 24530360 24530736 -178554796 + L1PB4 LINE L1 5789 6155 -1 274 275 0 0 chr5 24530753 24530839 -178554693 + L1MEd LINE L1 2672 2757 -3372 225 0 0 0 chr5 24531690 24531715 -178553817 + (A)n Simple_repeat Simple_repeat 1 25 0 261 98 0 0 chr5 24533004 24533045 -178552487 + (TG)n Simple_repeat Simple_repeat 2 42 0 5081 36 0 3 chr5 24533145 24533758 -178551774 + L1PA4 LINE L1 5545 6155 0 231 180 11 22 chr5 24534110 24534199 -178551333 + (TA)n Simple_repeat Simple_repeat 2 89 0 291 336 135 45 chr5 24534264 24534576 -178550956 - L2 LINE L2 -421 2893 2554 2065 115 54 0 chr5 24534631 24534926 -178550606 + AluSq SINE Alu 1 311 -2 293 211 87 124 chr5 24535361 24535522 -178550010 + MIR SINE MIR 18 172 -90 282 125 0 0 chr5 24535561 24535609 -178549923 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 357 82 0 0 chr5 24535610 24535659 -178549873 + (TAGG)n Simple_repeat Simple_repeat 2 50 0 251 200 50 0 chr5 24536570 24536630 -178548902 + CT-rich Low_complexity Low_complexity 1 63 0 656 177 7 0 chr5 24536821 24536962 -178548570 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 380 381 122 17 chr5 24536978 24537203 -178548329 + L2 LINE L2 2728 2928 -385 2527 123 0 18 chr5 24537203 24537585 -178547947 + THE1C LTR MaLR 1 375 0 380 381 122 17 chr5 24537585 24537887 -178547645 + L2 LINE L2 2928 3305 -8 562 185 0 0 chr5 24538071 24538179 -178547353 - L1MA3 LINE L1 0 6305 6198 1966 125 14 54 chr5 24538179 24538532 -178547000 + THE1B LTR MaLR 1 339 -25 267 152 0 0 chr5 24538571 24538617 -178546915 + (TA)n Simple_repeat Simple_repeat 1 46 0 9912 65 1 1 chr5 24538617 24540965 -178544567 - L1PA6 LINE L1 -15 6139 3793 5042 90 4 6 chr5 24540956 24542095 -178543437 - L1PA6 LINE L1 -2741 3405 2367 * 6834 79 3 8 chr5 24542160 24543099 -178542433 + L1P LINE L1 1536 2470 -3676 274 149 0 15 chr5 24543099 24543153 -178542379 + THE1A LTR MaLR 317 355 0 3624 88 8 4 chr5 24543153 24543655 -178541877 + THE1A-int LTR MaLR 1 504 -1076 1566 179 7 27 chr5 24543837 24544052 -178541480 + AluJb SINE Alu 1 210 -102 1893 117 4 0 chr5 24544052 24544326 -178541206 - AluY SINE Alu -36 275 1 1566 179 7 27 chr5 24544326 24544407 -178541125 + AluJb SINE Alu 210 291 -21 1432 247 87 30 chr5 24544551 24545021 -178540511 - MLT1D LTR MaLR 0 505 9 2165 182 52 28 chr5 24545198 24545664 -178539868 - L1MC1 LINE L1 -4 6329 5853 239 386 82 22 chr5 24545792 24545976 -178539556 + L2 LINE L2 1169 1363 -1951 196 330 88 11 chr5 24546126 24546217 -178539315 + L2 LINE L2 1609 1706 -1608 565 349 64 35 chr5 24546357 24546870 -178538662 + L2 LINE L2 1928 2455 -859 213 304 111 22 chr5 24546869 24547004 -178538528 - MIR SINE MIR -24 238 92 * 257 329 84 17 chr5 24547061 24547298 -178538234 - MARNA DNA Mariner -31 555 303 838 188 12 24 chr5 24547351 24547541 -178537991 + AluJo SINE Alu 120 307 0 206 349 81 15 chr5 24548227 24548425 -178537107 - MIR SINE MIR 0 262 52 22 0 0 0 chr5 24548800 24548822 -178536710 + AT_rich Low_complexity Low_complexity 1 22 0 223 333 40 0 chr5 24549437 24549512 -178536020 + L2 LINE L2 3224 3301 -12 24 0 0 0 chr5 24549634 24549658 -178535874 + AT_rich Low_complexity Low_complexity 1 24 0 1560 240 57 14 chr5 24549716 24550153 -178535379 - MER31B LTR ERV1 -10 456 1 21 36 0 0 chr5 24550512 24550540 -178534992 + AT_rich Low_complexity Low_complexity 1 28 0 293 311 27 40 chr5 24551597 24551745 -178533787 + L1MC5 LINE L1 7720 7865 -96 23 54 0 0 chr5 24551783 24551820 -178533712 + AT_rich Low_complexity Low_complexity 1 37 0 641 194 8 0 chr5 24551828 24551957 -178533575 - MER39B LTR ERV1 -382 271 142 3738 189 20 33 chr5 24551958 24552833 -178532699 - L1MA4 LINE L1 -225 7494 6623 3179 224 40 4 chr5 24552830 24553661 -178531871 - L1MA4 LINE L1 -2481 5084 4224 * 334 127 16 16 chr5 24553659 24553722 -178531810 - L1MA4 LINE L1 -4185 3380 3318 * 277 130 19 0 chr5 24553724 24553778 -178531754 + L1M1 LINE L1 3303 3357 -4208 6878 245 56 83 chr5 24553803 24554453 -178531079 - L1MA4 LINE L1 -4272 3293 2627 2858 6 0 3 chr5 24554453 24554772 -178530760 - AluYb8 SINE Alu 0 318 1 6878 245 56 83 chr5 24554772 24557042 -178528490 - L1MA4 LINE L1 -4938 2627 13 199 243 40 40 chr5 24557132 24557206 -178528326 + L2 LINE L2 3178 3251 -21 27 29 0 0 chr5 24557207 24557241 -178528291 + AT_rich Low_complexity Low_complexity 1 34 0 605 295 90 33 chr5 24557458 24557790 -178527742 - L2 LINE L2 -103 3210 2860 989 181 67 122 chr5 24558243 24558603 -178526929 + MER2 DNA MER2_type 4 343 -1 1694 243 99 11 chr5 24558881 24559355 -178526177 + L1ME1 LINE L1 5559 6074 -92 28 48 0 0 chr5 24559980 24560022 -178525510 + AT_rich Low_complexity Low_complexity 1 42 0 1681 262 30 19 chr5 24560516 24560981 -178524551 + MER70A LTR ERVL 1 470 -2 849 87 0 0 chr5 24561575 24561690 -178523842 - L1MA3 LINE L1 -11 6294 6180 255 31 0 0 chr5 24561867 24561899 -178523633 + (TGG)n Simple_repeat Simple_repeat 2 33 0 499 328 81 39 chr5 24561988 24562345 -178523187 - LTR16C LTR ERVL -56 435 64 1185 255 57 20 chr5 24562362 24562711 -178522821 - MLT1A2 LTR MaLR -2 372 11 343 289 18 18 chr5 24562767 24562881 -178522651 - MIR SINE MIR -76 186 73 1202 215 54 4 chr5 24563324 24563584 -178521948 + L1M1 LINE L1 15 287 -7278 437 202 0 0 chr5 24563577 24563666 -178521866 + L1M1 LINE L1 768 856 -6709 * 1663 143 24 57 chr5 24563671 24564007 -178521525 - THE1B LTR MaLR -35 329 5 7215 118 25 7 chr5 24564009 24565071 -178520461 - THE1B-int LTR MaLR 0 1580 499 5550 64 5 0 chr5 24565177 24566176 -178519356 + L1P2 LINE L1 4646 5649 -505 1574 161 0 0 chr5 24566316 24566559 -178518973 - AluSq SINE Alu -70 243 1 367 316 128 26 chr5 24566598 24566949 -178518583 - L1M4 LINE L1 -3613 2533 2147 200 108 0 27 chr5 24567042 24567079 -178518453 + (GA)n Simple_repeat Simple_repeat 1 36 0 29 28 0 0 chr5 24567295 24567331 -178518201 + AT_rich Low_complexity Low_complexity 1 36 0 2041 96 0 0 chr5 24567333 24567614 -178517918 - L1PA14 LINE L1 -14 6147 5867 1810 164 0 3 chr5 24567786 24568078 -178517454 - AluJb SINE Alu -15 297 7 246 313 90 22 chr5 24568740 24568874 -178516658 + MIR SINE MIR 64 206 -56 264 143 43 0 chr5 24569750 24569820 -178515712 + (TA)n Simple_repeat Simple_repeat 1 73 0 222 91 0 0 chr5 24569821 24569854 -178515678 + (TG)n Simple_repeat Simple_repeat 2 34 0 1485 276 103 43 chr5 24570187 24570931 -178514601 + LTR50 LTR ERVL 1 789 -6 1988 95 0 0 chr5 24571337 24571599 -178513933 + AluSc SINE Alu 31 292 -17 522 258 66 20 chr5 24573424 24573622 -178511910 + MER3 DNA MER1_type 3 209 0 1319 224 31 14 chr5 24573730 24574016 -178511516 - AluJb SINE Alu -9 303 13 346 94 31 0 chr5 24574143 24574207 -178511325 + GA-rich Low_complexity Low_complexity 3 68 0 873 214 143 43 chr5 24574378 24574691 -178510841 + MLT1A2 LTR MaLR 27 467 0 23 0 0 0 chr5 24575938 24575961 -178509571 + AT_rich Low_complexity Low_complexity 1 23 0 2035 111 14 7 chr5 24576429 24576717 -178508815 + AluSx SINE Alu 3 292 -20 243 61 0 0 chr5 24577033 24577066 -178508466 + (TG)n Simple_repeat Simple_repeat 2 34 0 326 338 90 23 chr5 24578395 24578661 -178506871 + HAL1 LINE L1 1368 1651 -856 1091 197 90 79 chr5 24578858 24579214 -178506318 - MLT1A1 LTR MaLR -5 360 1 7561 138 49 34 chr5 24579265 24580574 -178504958 - THE1-int LTR MaLR -85 1495 168 3948 188 79 22 chr5 24580577 24581577 -178503955 - MLT1A1-int LTR MaLR -295 1356 180 694 184 8 0 chr5 24581578 24581703 -178503829 + THE1C LTR MaLR 250 375 0 21 82 0 0 chr5 24582669 24582718 -178502814 + AT_rich Low_complexity Low_complexity 1 49 0 1631 240 32 38 chr5 24583168 24583699 -178501833 - L1MA9 LINE L1 -38 6274 5746 720 200 73 0 chr5 24583807 24583972 -178501560 - L1MA9 LINE L1 -541 5771 5595 230 0 33 0 chr5 24583972 24584002 -178501530 + (TTA)n Simple_repeat Simple_repeat 3 33 0 304 133 0 0 chr5 24584002 24584047 -178501485 - L1PA4 LINE L1 -18 6137 6093 672 13 0 0 chr5 24584047 24584125 -178501407 + L1P2 LINE L1 5706 5783 -372 373 210 0 12 chr5 24584117 24584198 -178501334 - L1MA9 LINE L1 -693 5619 5540 * 1214 209 11 0 chr5 24584205 24584483 -178501049 + L1 LINE L1 3398 3678 -2468 23 0 0 0 chr5 24584491 24584514 -178501018 + AT_rich Low_complexity Low_complexity 1 23 0 1767 271 128 12 chr5 24585762 24586553 -178498979 + L1MDa LINE L1 499 1527 -5013 2056 89 3 71 chr5 24587391 24587727 -178497805 + AluSp SINE Alu 1 313 0 21 0 0 0 chr5 24588142 24588163 -178497369 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 24588791 24588814 -178496718 + AT_rich Low_complexity Low_complexity 1 23 0 722 265 89 22 chr5 24789745 24790115 -178295417 + LTR37B LTR ERV1 1 395 -73 1360 346 114 11 chr5 24790243 24791242 -178294290 - L2 LINE L2 -393 2921 1820 1590 202 39 30 chr5 24791977 24792338 -178293194 + MLT1A1 LTR MaLR 2 365 0 32 0 0 0 chr5 24792736 24792768 -178292764 + AT_rich Low_complexity Low_complexity 1 32 0 279 308 42 25 chr5 24792775 24792895 -178292637 + L1MC4 LINE L1 7557 7678 -364 233 260 0 0 chr5 24792920 24792970 -178292562 + GA-rich Low_complexity Low_complexity 1 50 0 933 169 18 0 chr5 24794772 24794938 -178290594 - MLT1A1 LTR MaLR 0 365 197 2006 229 26 9 chr5 24794943 24795362 -178290170 - MLT2B3 LTR ERVL -128 426 1 281 241 35 46 chr5 24795673 24795760 -178289772 - MER5A DNA MER1_type -2 187 102 2057 138 3 0 chr5 24796156 24796446 -178289086 + AluSx SINE Alu 1 291 -21 495 276 181 26 chr5 24796927 24797159 -178288373 - LTR33 LTR ERVL -250 271 4 3847 15 0 18 chr5 24797269 24797768 -178287764 - L1PA2 LINE L1 0 6155 5706 300 281 35 53 chr5 24797769 24797883 -178287649 + MIR SINE MIR 151 262 0 224 220 9 37 chr5 24798511 24798620 -178286912 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 891 202 6 0 chr5 24799991 24800159 -178285373 + AluJb SINE Alu 136 304 -8 362 340 123 8 chr5 24801964 24802199 -178283333 + MLT1I LTR MaLR 1 262 -147 711 283 61 36 chr5 24802586 24803030 -178282502 - L1M4 LINE L1 -1313 4833 4373 60 27 0 0 chr5 24803030 24803104 -178282428 + AT_rich Low_complexity Low_complexity 1 74 0 1592 199 10 20 chr5 24803282 24803588 -178281944 + AluJb SINE Alu 1 303 -9 295 373 0 0 chr5 24803671 24803789 -178281743 - HERV16 LTR ERVL -2389 3096 2979 414 257 38 9 chr5 24803863 24803968 -178281564 - HERV16 LTR ERVL -3670 1326 1219 540 278 66 26 chr5 24803997 24804224 -178281308 - HERV16 LTR ERVL -3830 1166 931 917 91 68 0 chr5 24804234 24804366 -178281166 + MSTA LTR MaLR 1 141 -287 3454 196 34 17 chr5 24804377 24805478 -178280054 - L1M2 LINE L1 -645 5667 4549 7653 128 17 0 chr5 24805510 24806643 -178278889 - THE1B-int LTR MaLR -428 1152 1 1876 178 40 9 chr5 24806645 24806994 -178278538 - THE1B LTR MaLR -2 362 3 3094 206 16 6 chr5 24806996 24807684 -178277848 - L1M4 LINE L1 -1802 4344 3650 198 103 0 0 chr5 24808313 24808342 -178277190 + (TC)n Simple_repeat Simple_repeat 2 30 0 6012 150 39 34 chr5 24808342 24808856 -178276676 - Tigger3b DNA MER2_type -1798 1230 720 1907 142 3 3 chr5 24808856 24809151 -178276381 - AluSx SINE Alu -17 295 1 6012 150 39 34 chr5 24809151 24809455 -178276077 - Tigger3b DNA MER2_type -2308 720 419 2218 66 0 21 chr5 24809455 24809770 -178275762 + AluY SINE Alu 1 309 0 6012 150 39 34 chr5 24809770 24810170 -178275362 - Tigger3b DNA MER2_type -2609 419 3 305 280 118 40 chr5 24810441 24811227 -178274305 - L1MC5 LINE L1 -492 7470 6780 289 270 14 0 chr5 24811253 24811327 -178274205 - L1MC4a LINE L1 -1092 6716 6642 32 43 0 0 chr5 24811630 24811676 -178273856 + AT_rich Low_complexity Low_complexity 1 46 0 1784 185 48 43 chr5 24811733 24812294 -178273238 - MLT2A2 LTR ERVL 0 554 1 1982 129 7 0 chr5 24812410 24812704 -178272828 + AluSq SINE Alu 1 296 -17 34 79 0 0 chr5 24813684 24813760 -178271772 + AT_rich Low_complexity Low_complexity 1 76 0 774 32 0 0 chr5 24813976 24814069 -178271463 + (TA)n Simple_repeat Simple_repeat 1 93 0 4530 182 43 24 chr5 24814940 24816735 -178268797 - L1MA6 LINE L1 -180 7539 5704 4460 223 45 17 chr5 24816835 24818350 -178267182 - L1MA6 LINE L1 -2719 4846 3281 576 198 0 86 chr5 24818379 24818512 -178267020 + MER4E LTR ERV1 1 222 -650 2097 122 0 0 chr5 24818512 24818806 -178266726 - AluSg SINE Alu -16 294 1 576 198 0 86 chr5 24818806 24818865 -178266667 + MER4E LTR ERV1 222 284 -588 * 1477 207 41 32 chr5 24818862 24819205 -178266327 + MER4D LTR ERV1 546 891 -12 342 264 125 7 chr5 24819265 24819409 -178266123 - L1MA6 LINE L1 -4357 3208 3048 2837 191 62 7 chr5 24819410 24819976 -178265556 + Tigger1 DNA MER2_type 1 597 -1821 21 0 0 0 chr5 24820565 24820586 -178264946 + AT_rich Low_complexity Low_complexity 1 21 0 2264 239 42 16 chr5 24821594 24822142 -178263390 + REP3 LTR ERV 1 562 0 1465 198 13 48 chr5 24822325 24822777 -178262755 - MLT1D LTR MaLR 0 505 1 660 271 48 33 chr5 24824293 24824503 -178261029 + MER58A DNA MER1_type 2 214 -10 423 248 9 0 chr5 24824754 24824867 -178260665 + LTR43 LTR ERV1 180 293 -309 1974 116 4 0 chr5 24824931 24825206 -178260326 - AluSx SINE Alu -3 309 34 356 145 0 92 chr5 24825239 24825315 -178260217 + Charlie3 DNA MER1_type 1 69 -2641 1988 141 7 0 chr5 24826307 24826606 -178258926 + AluSq SINE Alu 6 306 -7 933 236 148 107 chr5 24827979 24828567 -178256965 - MLT1E1 LTR MaLR -37 617 6 290 339 39 15 chr5 24828622 24828752 -178256780 + MIR3 SINE MIR 44 176 -32 324 49 0 0 chr5 24828820 24828861 -178256671 - MADE1 DNA Mariner 0 80 40 1084 319 163 6 chr5 24829493 24830210 -178255322 + L2 LINE L2 1572 2401 -913 284 358 52 36 chr5 24831087 24831394 -178254138 - HERVL LTR ERVL -2297 3357 3046 544 353 33 3 chr5 24831565 24831871 -178253661 - HERVL LTR ERVL -2901 2863 2549 1475 189 47 153 chr5 24832086 24832719 -178252813 + L1MA9 LINE L1 5652 6351 39 1820 196 130 9 chr5 24832719 24833173 -178252359 - LTR22 LTR ERVK 0 509 1 1475 189 47 153 chr5 24833173 24833191 -178252341 + L1MA9 LINE L1 6351 6369 57 180 0 0 0 chr5 24833191 24833211 -178252321 + (TG)n Simple_repeat Simple_repeat 2 21 0 309 68 0 0 chr5 24833217 24833261 -178252271 + (TA)n Simple_repeat Simple_repeat 2 45 0 1475 189 47 153 chr5 24833261 24833298 -178252234 + L1MA9 LINE L1 6235 6274 -38 485 345 66 16 chr5 24833377 24833797 -178251735 - HERVL LTR ERVL -2818 2178 1776 408 327 50 13 chr5 24834932 24835091 -178250441 + MIR SINE MIR 56 220 -42 2189 91 3 7 chr5 24836964 24837260 -178248272 - AluSq SINE Alu -10 303 9 22 0 0 0 chr5 24837480 24837502 -178248030 + AT_rich Low_complexity Low_complexity 1 22 0 1634 256 37 37 chr5 24838157 24838645 -178246887 - LTR40a LTR ERVL -9 510 23 183 391 62 0 chr5 24839246 24839374 -178246158 + L2 LINE L2 1683 1818 -1496 332 333 58 104 chr5 24839467 24839881 -178245651 + L2 LINE L2 2066 2460 -854 2342 82 20 0 chr5 24840247 24840552 -178244980 - AluSx SINE Alu -1 311 1 242 286 13 13 chr5 24840813 24840890 -178244642 + L1M4 LINE L1 4071 4147 -1999 276 171 49 12 chr5 24841091 24841173 -178244359 + (TA)n Simple_repeat Simple_repeat 2 86 0 31 44 0 0 chr5 24842060 24842105 -178243427 + AT_rich Low_complexity Low_complexity 1 45 0 368 254 42 17 chr5 24843031 24843149 -178242383 + MIR SINE MIR 113 233 -29 25 65 0 0 chr5 24844474 24844520 -178241012 + AT_rich Low_complexity Low_complexity 1 46 0 234 105 0 0 chr5 24845047 24845085 -178240447 + (TG)n Simple_repeat Simple_repeat 1 38 0 250 307 22 66 chr5 24845117 24845254 -178240278 + MLT1J LTR MaLR 191 321 -190 194 366 0 21 chr5 24847025 24847118 -178238414 + MIR3 SINE MIR 76 166 -42 25 65 0 0 chr5 24847588 24847634 -178237898 + AT_rich Low_complexity Low_complexity 1 46 0 22 56 0 0 chr5 24847728 24847764 -178237768 + AT_rich Low_complexity Low_complexity 1 36 0 719 197 8 0 chr5 24847948 24848075 -178237457 + FLAM_A SINE Alu 1 128 -5 224 182 0 18 chr5 24848300 24848355 -178237177 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 21 36 0 0 chr5 24848449 24848477 -178237055 + AT_rich Low_complexity Low_complexity 1 28 0 513 236 174 17 chr5 24848677 24848855 -178236677 + MER58A DNA MER1_type 4 209 -15 330 304 106 28 chr5 24848877 24849235 -178236297 - HAL1 LINE L1 -1364 1143 758 206 219 41 0 chr5 24849564 24849637 -178235895 + (TA)n Simple_repeat Simple_repeat 2 77 0 223 157 29 0 chr5 24849650 24849720 -178235812 + (TA)n Simple_repeat Simple_repeat 2 73 0 2272 77 0 35 chr5 24850737 24851049 -178234483 - AluY SINE Alu -10 301 1 2003 128 0 3 chr5 24851260 24851556 -178233976 - AluSx SINE Alu -15 297 3 327 25 0 0 chr5 24851643 24851683 -178233849 + (TG)n Simple_repeat Simple_repeat 2 41 0 1427 212 0 30 chr5 24851759 24852061 -178233471 + AluJb SINE Alu 1 293 -19 559 272 32 6 chr5 24852439 24852597 -178232935 - MLT1D LTR MaLR -2 503 342 4436 112 99 11 chr5 24852597 24853314 -178232218 + LTR17 LTR ERV1 1 780 0 2008 141 84 19 chr5 24853320 24853773 -178231759 - MER1A DNA MER1_type 0 529 6 1344 224 46 40 chr5 24853777 24854103 -178231429 - MLT1D LTR MaLR -157 348 21 414 265 8 17 chr5 24854106 24854223 -178231309 - L1MCc LINE L1 -5535 888 773 609 205 0 8 chr5 24854658 24854775 -178230757 - MER20 DNA MER1_type -11 208 93 1406 254 118 35 chr5 24854781 24854829 -178230703 - MLT1E LTR MaLR -3 590 547 405 0 0 0 chr5 24854829 24854874 -178230658 + (CA)n Simple_repeat Simple_repeat 2 46 0 1406 254 118 35 chr5 24854874 24855181 -178230351 - MLT1E LTR MaLR -46 547 267 1786 174 35 32 chr5 24855181 24855555 -178229977 + THE1C LTR MaLR 1 375 0 8998 147 29 34 chr5 24855555 24857143 -178228389 + THE1C-int LTR MaLR 1 1580 0 2026 160 11 26 chr5 24857143 24857524 -178228008 + THE1C LTR MaLR 1 375 0 1406 254 118 35 chr5 24857524 24857657 -178227875 - MLT1E LTR MaLR -325 268 58 1033 179 25 82 chr5 24857682 24857962 -178227570 + MER21A LTR ERV1 1 264 -667 * 2425 167 125 18 chr5 24857961 24858465 -178227067 + MER21A LTR ERV1 368 925 -6 447 250 11 0 chr5 24858470 24858562 -178226970 - MER20 DNA MER1_type -126 93 1 643 239 92 25 chr5 24858601 24858839 -178226693 - L1MCc LINE L1 -6143 280 27 392 301 148 11 chr5 24859254 24859430 -178226102 - MLT1E LTR MaLR -175 418 219 1199 210 98 61 chr5 24859563 24859757 -178225775 + MLT1B LTR MaLR 1 186 -204 2270 156 49 10 chr5 24859757 24860168 -178225364 + MSTA LTR MaLR 1 427 -1 1199 210 98 61 chr5 24860168 24860349 -178225183 + MLT1B LTR MaLR 186 390 0 2142 129 73 15 chr5 24860407 24860749 -178224783 - THE1B LTR MaLR 0 364 3 28 29 0 0 chr5 24861301 24861336 -178224196 + AT_rich Low_complexity Low_complexity 1 35 0 1850 251 42 21 chr5 24864098 24864628 -178220904 - MER87 LTR ERV1 0 541 1 322 301 12 35 chr5 24865110 24865283 -178220249 - MER57A LTR ERV1 0 403 235 1222 248 18 49 chr5 24865568 24866000 -178219532 - MER57A-int LTR ERV1 -1587 4744 4629 390 219 123 61 chr5 24866007 24866446 -178219086 - MER57A-int LTR ERV1 -2371 3575 1978 251 277 31 0 chr5 24866517 24866582 -178218950 - MER34 LTR ERV1 0 542 476 369 257 38 38 chr5 24866582 24866687 -178218845 - MER34 LTR ERV1 -305 237 133 1813 169 22 33 chr5 24866867 24867235 -178218297 - THE1B LTR MaLR 0 364 1 2340 194 14 22 chr5 24867238 24867727 -178217805 + MER50 LTR ERV1 1 485 -249 1874 158 3 3 chr5 24867727 24868012 -178217520 + AluSx SINE Alu 1 285 -27 225 0 0 0 chr5 24868024 24868049 -178217483 + (TA)n Simple_repeat Simple_repeat 1 25 0 2438 87 0 3 chr5 24868049 24868360 -178217172 - AluSp SINE Alu -3 310 1 1338 157 11 77 chr5 24868394 24868668 -178216864 + MER50 LTR ERV1 479 734 0 360 238 68 46 chr5 24868672 24869111 -178216421 - MER57A-int LTR ERV1 -418 1368 879 225 328 30 30 chr5 24869216 24869350 -178216182 - MER34C LTR ERV1 -158 427 294 306 271 10 31 chr5 24870063 24870159 -178215373 - MER57A-int LTR ERV1 -4560 376 283 1248 197 42 32 chr5 24870211 24870520 -178215012 + AluJo SINE Alu 1 312 0 5116 154 24 27 chr5 24870706 24872355 -178213177 - L1PA13 LINE L1 -2 6161 4519 * 8805 205 21 21 chr5 24872351 24873391 -178212141 + L1P LINE L1 2469 3507 -2639 189 0 0 0 chr5 24873391 24873412 -178212120 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 8805 205 21 21 chr5 24873412 24873477 -178212055 + L1P LINE L1 3507 3570 -2576 1659 139 0 0 chr5 24873477 24873714 -178211818 + AluSq SINE Alu 1 237 -76 8805 205 21 21 chr5 24873714 24874647 -178210885 + L1P LINE L1 3570 4509 -1637 428 282 99 42 chr5 24875486 24875819 -178209713 - MER57A LTR ERV1 -5 429 78 30 45 0 0 chr5 24876457 24876501 -178209031 + AT_rich Low_complexity Low_complexity 1 44 0 1870 162 3 0 chr5 24876590 24876880 -178208652 - AluSx SINE Alu -21 291 1 1249 207 23 4 chr5 24877456 24877717 -178207815 - AluJo SINE Alu -34 278 13 429 285 27 35 chr5 24877744 24878000 -178207532 - L1MEd LINE L1 -4894 1225 972 21 0 0 0 chr5 24878909 24878930 -178206602 + AT_rich Low_complexity Low_complexity 1 21 0 794 173 13 0 chr5 24879330 24879480 -178206052 - MER47A DNA MER2_type -190 176 25 1362 117 0 10 chr5 24879758 24879964 -178205568 - L1PB1 LINE L1 -1 6150 5947 23 0 0 0 chr5 24880352 24880375 -178205157 + AT_rich Low_complexity Low_complexity 1 23 0 258 275 99 11 chr5 24880909 24881000 -178204532 - L2 LINE L2 -2 3270 3172 6382 191 8 6 chr5 24981860 24983152 -178102380 + L1P LINE L1 3274 4568 -1578 29 47 0 0 chr5 24983420 24983463 -178102069 + AT_rich Low_complexity Low_complexity 1 43 0 5762 119 13 11 chr5 24983543 24984829 -178100703 - L1PA13 LINE L1 -2 6161 4870 954 226 51 30 chr5 24984929 24985164 -178100368 + MLT1B LTR MaLR 151 390 0 6323 199 23 46 chr5 24985698 24986831 -178098701 - L1 LINE L1 -909 5237 4104 317 89 0 0 chr5 24986831 24986876 -178098656 - MADE1 DNA Mariner -35 45 1 6323 199 23 46 chr5 24986876 24987289 -178098243 - L1 LINE L1 -2042 4104 3683 1057 130 19 0 chr5 24987289 24987451 -178098081 - AluSg/x SINE Alu -2 310 146 23 0 0 0 chr5 24989576 24989599 -178095933 + AT_rich Low_complexity Low_complexity 1 23 0 360 152 0 0 chr5 24990495 24990561 -178094971 + (TA)n Simple_repeat Simple_repeat 2 67 0 3956 171 30 52 chr5 24990817 24991697 -178093835 - L1MB3 LINE L1 -2 6181 5322 1797 131 7 18 chr5 24993296 24993579 -178091953 + AluSx SINE Alu 4 321 0 343 0 0 0 chr5 24993579 24993617 -178091915 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 790 219 122 15 chr5 24993957 24994183 -178091349 + AluJo SINE Alu 66 312 0 1764 152 18 11 chr5 24994259 24994571 -178090961 - AluSx SINE Alu 0 314 1 408 336 92 37 chr5 24994613 24994940 -178090592 - L1ME LINE L1 -327 5794 5450 9245 186 62 12 chr5 24995853 24996382 -178089150 - L1P LINE L1 -1020 5126 4625 3559 71 2 0 chr5 24996382 24996834 -178088698 - MLT2A2 LTR ERVL 0 453 1 9245 186 62 12 chr5 24996834 24998103 -178087429 - L1P LINE L1 -1521 4625 3218 2097 100 0 7 chr5 24998103 24998412 -178087120 - AluSc SINE Alu 0 307 1 9245 186 62 12 chr5 24998412 24998583 -178086949 - L1P LINE L1 -2928 3218 3057 3997 191 8 0 chr5 24998600 24999360 -178086172 + L1P LINE L1 1924 2689 -3457 1397 246 66 0 chr5 25001389 25001738 -178083794 + MER67D LTR ERV1 5 376 -138 1756 159 55 0 chr5 25001896 25002185 -178083347 - AluSg SINE Alu -3 307 3 26 0 0 0 chr5 25002195 25002221 -178083311 + AT_rich Low_complexity Low_complexity 1 26 0 2953 96 41 2 chr5 25002570 25003006 -178082526 - MLT2A2 LTR ERVL 0 453 1 26 82 0 0 chr5 25003093 25003154 -178082378 + AT_rich Low_complexity Low_complexity 1 61 0 619 298 64 34 chr5 25003717 25004012 -178081520 - LTR16C LTR ERVL 0 491 188 17092 115 42 23 chr5 25004135 25006789 -178078743 + Charlie3 DNA MER1_type 1 2706 -4 1512 236 20 9 chr5 25008185 25008529 -178077003 + MLT2C1 LTR ERVL 2 349 -48 290 87 22 0 chr5 25008534 25008580 -178076952 + (TC)n Simple_repeat Simple_repeat 1 47 0 252 220 0 0 chr5 25008592 25008651 -178076881 + MLT2C1 LTR ERVL 462 520 0 237 288 59 20 chr5 25008818 25008971 -178076561 + L1M2c LINE L1 1822 1980 -4809 304 244 31 75 chr5 25008993 25009153 -178076379 + L1MEc LINE L1 1178 1330 -5066 24 32 0 0 chr5 25009278 25009309 -178076223 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr5 25009421 25009462 -178076070 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 25010030 25010059 -178075473 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr5 25010509 25010530 -178075002 + (A)n Simple_repeat Simple_repeat 1 21 0 263 356 25 0 chr5 25010846 25010964 -178074568 - L2 LINE L2 -852 2462 2342 398 237 58 64 chr5 25011128 25011301 -178074231 + MLT1H LTR MaLR 3 174 -375 244 302 107 65 chr5 25012599 25012814 -178072718 - LTR16A LTR ERVL -202 248 25 265 277 66 36 chr5 25012874 25013011 -178072521 + MLT1H LTR MaLR 3 143 -406 2314 68 0 7 chr5 25013062 25013354 -178072178 + AluY SINE Alu 3 292 -19 232 188 94 16 chr5 25013536 25013600 -178071932 + MLT1H LTR MaLR 481 549 0 25 0 0 0 chr5 25013638 25013663 -178071869 + AT_rich Low_complexity Low_complexity 1 25 0 243 156 13 52 chr5 25014200 25014277 -178071255 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 225 146 0 0 chr5 25014298 25014339 -178071193 - LTR66 LTR ERVL -172 438 398 230 242 22 22 chr5 25014343 25014434 -178071098 + L1MC4 LINE L1 6614 6704 -1338 540 130 16 49 chr5 25014451 25014636 -178070896 + (TA)n Simple_repeat Simple_repeat 2 180 0 216 196 11 22 chr5 25014651 25014743 -178070789 + (TA)n Simple_repeat Simple_repeat 2 92 0 27 49 0 0 chr5 25015625 25015666 -178069866 + AT_rich Low_complexity Low_complexity 1 41 0 2850 6 0 0 chr5 25016803 25017115 -178068417 - AluYb8 SINE Alu -6 312 1 22 70 0 0 chr5 25017142 25017185 -178068347 + AT_rich Low_complexity Low_complexity 1 43 0 24 77 0 0 chr5 25018264 25018316 -178067216 + AT_rich Low_complexity Low_complexity 1 52 0 208 286 22 11 chr5 25018504 25018595 -178066937 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 69 0 35 chr5 25019056 25019143 -178066389 + AT_rich Low_complexity Low_complexity 1 84 0 291 157 0 0 chr5 25019984 25020035 -178065497 + A-rich Low_complexity Low_complexity 1 51 0 216 97 0 0 chr5 25020052 25020083 -178065449 + (TG)n Simple_repeat Simple_repeat 2 32 0 3024 230 22 18 chr5 25020083 25020758 -178064774 - ERVL LTR ERVL -3852 1912 1235 183 80 0 0 chr5 25020758 25020783 -178064749 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 434 62 0 0 chr5 25020785 25020849 -178064683 - Alu SINE Alu -2 310 247 2229 211 17 6 chr5 25020894 25021363 -178064169 + ERVL LTR ERVL 766 1239 -4525 1962 70 12 8 chr5 25021371 25021628 -178063904 + AluSq SINE Alu 1 258 -55 1396 193 23 36 chr5 25021628 25021925 -178063607 + MER61A LTR ERV1 49 343 0 471 72 0 0 chr5 25021981 25022050 -178063482 - AluS SINE Alu -244 69 1 27 0 0 0 chr5 25022758 25022785 -178062747 + AT_rich Low_complexity Low_complexity 1 27 0 1318 187 142 89 chr5 25023821 25024238 -178061294 - Tigger2 DNA MER2_type 0 2718 2280 341 229 0 0 chr5 25024243 25024304 -178061228 + MER8 DNA MER2_type 179 239 0 227 39 96 0 chr5 25024864 25024916 -178060616 + (CCTAA)n Simple_repeat Simple_repeat 4 60 0 288 248 26 17 chr5 25025760 25025877 -178059655 + (TA)n Simple_repeat Simple_repeat 1 118 0 1238 213 109 30 chr5 25026754 25027092 -178058440 - MLT1A1 LTR MaLR 0 365 1 335 143 31 10 chr5 25027282 25027380 -178058152 + (TA)n Simple_repeat Simple_repeat 1 100 0 183 387 16 0 chr5 25027846 25027908 -178057624 + L2 LINE L2 2207 2269 -1045 21 0 0 0 chr5 25027969 25027990 -178057542 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 25028079 25028100 -178057432 + AT_rich Low_complexity Low_complexity 1 21 0 703 230 52 17 chr5 25030996 25031170 -178054362 - MER20 DNA MER1_type -38 181 2 481 138 23 0 chr5 25031757 25031844 -178053688 - L1PA13 LINE L1 0 6163 6075 208 231 22 66 chr5 25032035 25032126 -178053406 - MIR SINE MIR -54 208 122 713 288 5 26 chr5 25033022 25033213 -178052319 - Tigger3(Golem) DNA MER2_type -2842 187 1 22 0 0 0 chr5 25033439 25033461 -178052071 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 25034641 25034662 -178050870 + AT_rich Low_complexity Low_complexity 1 21 0 683 147 202 23 chr5 25034685 25034814 -178050718 - AluSg/x SINE Alu -24 286 135 388 93 27 0 chr5 25034814 25034889 -178050643 + (TA)n Simple_repeat Simple_repeat 1 77 0 1924 123 5 115 chr5 25035919 25036293 -178049239 - MER1B DNA MER1_type -4 335 3 1963 74 0 0 chr5 25036650 25036929 -178048603 - AluY SINE Alu 0 317 39 1710 172 40 0 chr5 25037278 25037575 -178047957 - AluJb SINE Alu -3 309 1 41 21 0 0 chr5 25037636 25037684 -178047848 + AT_rich Low_complexity Low_complexity 1 48 0 3143 196 57 40 chr5 25037688 25037770 -178047762 + L1MB1 LINE L1 5209 5288 -880 185 35 69 0 chr5 25037770 25037799 -178047733 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3143 196 57 40 chr5 25037799 25038542 -178046990 + L1MB1 LINE L1 5288 6029 -139 2382 140 12 22 chr5 25038556 25038969 -178046563 - L1P4 LINE L1 -443 5723 5315 6820 50 42 0 chr5 25038972 25039931 -178045601 - L1PA5 LINE L1 -8 6146 5183 511 271 24 24 chr5 25039956 25039989 -178045543 + L1MA10 LINE L1 6124 6156 -178 243 61 0 0 chr5 25039989 25040022 -178045510 + (CA)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 25040022 25040158 -178045374 + L1MA10 LINE L1 6155 6293 -41 275 302 28 0 chr5 25043649 25043755 -178041777 + HsTC2 DNA Tc2 4 112 -1786 257 330 66 0 chr5 25044159 25044265 -178041267 + ERVL LTR ERVL 1341 1453 -4311 2217 122 9 3 chr5 25044426 25044762 -178040770 + L1PA13 LINE L1 5612 5949 -214 2138 150 22 19 chr5 25044762 25045123 -178040409 - THE1B LTR MaLR 0 364 3 8543 112 4 2 chr5 25045125 25046311 -178039221 - THE1B-int LTR MaLR 0 1580 393 580 129 10 0 chr5 25046311 25046412 -178039120 + L1PA13 LINE L1 6062 6163 0 22 35 0 0 chr5 25046412 25046441 -178039091 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 25046746 25046791 -178038741 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 25047814 25047850 -178037682 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 25048117 25048141 -178037391 + AT_rich Low_complexity Low_complexity 1 24 0 578 326 126 26 chr5 25049390 25049740 -178035792 + L2 LINE L2 1455 1839 -1475 270 352 30 30 chr5 25049773 25050009 -178035523 + L2 LINE L2 3074 3309 -4 879 319 81 23 chr5 25050633 25051065 -178034467 + LTR16B LTR ERVL 8 464 0 965 320 38 12 chr5 25051377 25051796 -178033736 + ERVL LTR ERVL 839 1268 -3728 24 0 0 0 chr5 25053118 25053142 -178032390 + AT_rich Low_complexity Low_complexity 1 24 0 507 303 17 27 chr5 25053262 25053559 -178031973 - L1ME LINE L1 -552 5610 5317 7775 18 0 5 chr5 25053564 25055086 -178030446 - L1PA3 LINE L1 -4 6151 4634 305 253 160 38 chr5 25055238 25055475 -178030057 + L1ME LINE L1 4807 5072 -1074 5191 214 48 6 chr5 25055565 25056872 -178028660 + L1 LINE L1 2300 3661 -2485 1515 209 29 3 chr5 25056874 25057181 -178028351 + L1PB4 LINE L1 5825 6139 -17 497 158 73 0 chr5 25057281 25057363 -178028169 - AluS SINE Alu -225 88 1 14442 211 33 11 chr5 25057364 25057740 -178027792 - L1P LINE L1 -751 5395 5029 2124 100 4 0 chr5 25057740 25058040 -178027492 - AluY SINE Alu 0 301 1 14442 211 33 11 chr5 25058040 25059357 -178026175 - L1P LINE L1 -1117 5029 3742 255 79 0 0 chr5 25059357 25059395 -178026137 + (TG)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 25059395 25061059 -178024473 - L1P LINE L1 -2404 3742 1963 1751 167 27 13 chr5 25061057 25061780 -178023752 - L1PA13 LINE L1 -4892 1895 1 * 22 0 0 0 chr5 25062122 25062144 -178023388 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 25062201 25062222 -178023310 + AT_rich Low_complexity Low_complexity 1 21 0 228 133 89 0 chr5 25064326 25064371 -178021161 - L2 LINE L2 0 3313 3265 25 0 0 0 chr5 25064383 25064408 -178021124 + AT_rich Low_complexity Low_complexity 1 25 0 276 270 144 0 chr5 25064599 25064710 -178020822 + L1ME LINE L1 5562 5688 -433 192 40 0 0 chr5 25065862 25065887 -178019645 + (CA)n Simple_repeat Simple_repeat 2 26 0 213 222 0 0 chr5 25065887 25065950 -178019582 + (TATG)n Simple_repeat Simple_repeat 2 64 0 313 92 0 46 chr5 25066084 25066101 -178019431 + (TAAAAA)n Simple_repeat Simple_repeat 3 19 -45 6140 10 0 0 chr5 25066101 25066794 -178018738 + L1PA3 LINE L1 5463 6155 0 313 92 0 46 chr5 25066794 25066841 -178018691 + (TAAAAA)n Simple_repeat Simple_repeat 19 64 0 1516 123 58 0 chr5 25067055 25067316 -178018216 + L1MA5A LINE L1 6018 6293 -4 483 325 90 62 chr5 25067481 25068014 -178017518 - ERVL LTR ERVL -4311 1453 906 258 185 0 31 chr5 25068837 25068902 -178016630 + (TTTA)n Simple_repeat Simple_repeat 1 63 0 184 197 13 13 chr5 25069274 25069350 -178016182 + (TA)n Simple_repeat Simple_repeat 2 77 0 22 0 0 0 chr5 25069675 25069697 -178015835 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr5 25069865 25069917 -178015615 + AT_rich Low_complexity Low_complexity 1 52 0 229 122 68 0 chr5 25070176 25070250 -178015282 + (TATAA)n Simple_repeat Simple_repeat 1 79 0 346 189 73 12 chr5 25070266 25070430 -178015102 + (TA)n Simple_repeat Simple_repeat 1 174 0 * 352 228 5 54 chr5 25070361 25070545 -178014987 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 469 155 32 75 chr5 25070462 25070719 -178014813 + (CTATA)n Simple_repeat Simple_repeat 1 246 0 2428 197 22 15 chr5 25070723 25071261 -178014271 + L1MC3 LINE L1 7237 7778 -7 5922 127 88 67 chr5 25073460 25075429 -178010103 + pTR5 LTR ERV1 741 2438 0 4777 162 23 13 chr5 25075746 25076161 -178009371 + L1MA8 LINE L1 5363 5772 -519 2181 112 0 0 chr5 25076161 25076445 -178009087 + AluSx SINE Alu 1 287 -25 369 0 0 0 chr5 25076445 25076486 -178009046 + (CATA)n Simple_repeat Simple_repeat 2 42 0 2181 112 0 0 chr5 25076486 25076497 -178009035 + AluSx SINE Alu 286 296 -16 4777 162 23 13 chr5 25076497 25076996 -178008536 + L1MA8 LINE L1 5772 6286 -5 180 0 0 0 chr5 25077090 25077110 -178008422 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 25077327 25077348 -178008184 + AT_rich Low_complexity Low_complexity 1 21 0 1430 147 52 34 chr5 25078213 25078549 -178006983 - Tigger3(Golem) DNA MER2_type -47 2982 1 805 212 61 39 chr5 25078976 25079024 -178006508 + MER46A DNA MER2_type 1 46 -2685 2371 77 0 3 chr5 25079024 25079324 -178006208 - AluY SINE Alu -12 299 1 805 212 61 39 chr5 25079324 25079506 -178006026 + MER46A DNA MER2_type 46 236 0 290 186 12 31 chr5 25079534 25079695 -178005837 + (TA)n Simple_repeat Simple_repeat 2 159 0 212 260 13 0 chr5 25079706 25079783 -178005749 + (TA)n Simple_repeat Simple_repeat 2 79 0 198 0 0 0 chr5 25080435 25080457 -178005075 + (CA)n Simple_repeat Simple_repeat 2 23 0 1920 217 20 80 chr5 25080458 25081047 -178004485 - MLT2B3 LTR ERVL 0 554 1 372 264 95 7 chr5 25081247 25081395 -178004137 + MER90 LTR ERV1 132 292 -283 1052 193 18 14 chr5 25082312 25082530 -178003002 + AluJo SINE Alu 89 307 -5 14541 126 34 33 chr5 25083042 25085635 -177999897 - MER109 Unknown Unknown 0 2432 100 23 33 0 0 chr5 25087081 25087111 -177998421 + AT_rich Low_complexity Low_complexity 1 30 0 4017 213 59 15 chr5 25087121 25088548 -177996984 - L1MA9 LINE L1 -29 6283 4792 3478 205 47 56 chr5 25088547 25088914 -177996618 + L1MB1 LINE L1 3000 3369 -2777 * 1780 119 119 39 chr5 25088914 25089251 -177996281 - THE1B LTR MaLR 0 364 1 3478 205 47 56 chr5 25089251 25089914 -177995618 + L1MB1 LINE L1 3369 4020 -2126 2129 172 15 32 chr5 25089915 25090386 -177995146 + L1MB1 LINE L1 5705 6167 -1 22 35 0 0 chr5 25090468 25090497 -177995035 + AT_rich Low_complexity Low_complexity 1 29 0 27 73 0 0 chr5 25090557 25090612 -177994920 + AT_rich Low_complexity Low_complexity 1 55 0 322 345 110 16 chr5 25090883 25091202 -177994330 - LTR33 LTR ERVL -7 514 166 2244 72 0 0 chr5 25091389 25091665 -177993867 + AluY SINE Alu 34 309 -2 28 29 0 0 chr5 25092221 25092256 -177993276 + AT_rich Low_complexity Low_complexity 1 35 0 6929 160 39 21 chr5 25092269 25093466 -177992066 + L1PA8A LINE L1 4 1282 -5002 198 71 0 0 chr5 25093466 25093494 -177992038 + (CAA)n Simple_repeat Simple_repeat 1 28 0 6929 160 39 21 chr5 25093494 25093769 -177991763 + L1PA8A LINE L1 1282 1550 -4734 6045 218 7 20 chr5 25093873 25095771 -177989761 + L1P3 LINE L1 756 2627 -3834 20148 136 13 16 chr5 25095874 25097647 -177987885 + L1PA8A LINE L1 2206 3984 -2462 2046 103 0 7 chr5 25097647 25097955 -177987577 - AluSg SINE Alu 0 306 1 20148 136 13 16 chr5 25097955 25100424 -177985108 + L1PA8A LINE L1 3984 6418 -28 24 67 0 0 chr5 25101479 25101524 -177984008 + AT_rich Low_complexity Low_complexity 1 45 0 30 59 0 0 chr5 25101586 25101637 -177983895 + AT_rich Low_complexity Low_complexity 1 51 0 2127 130 22 33 chr5 25101817 25102185 -177983347 - THE1B LTR MaLR 0 364 1 1409 251 38 15 chr5 25102573 25103047 -177982485 - Charlie1b DNA MER1_type -34 489 5 492 242 50 28 chr5 25103096 25103278 -177982254 - MER106A DNA MER1_type 0 236 51 1585 232 76 19 chr5 25103672 25104134 -177981398 - L1MD2 LINE L1 -12 6347 5860 2833 101 5 5 chr5 25104794 25105209 -177980323 - L1PA10 LINE L1 -382 5786 5372 2428 104 12 0 chr5 25105211 25105556 -177979976 + L1PA10 LINE L1 5790 6138 -30 197 0 0 67 chr5 25105559 25105589 -177979943 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 41 48 0 0 chr5 25105797 25105859 -177979673 + AT_rich Low_complexity Low_complexity 1 62 0 249 236 0 0 chr5 25105865 25105920 -177979612 - L1MA8 LINE L1 -180 6111 6057 1577 160 33 39 chr5 25106287 25106624 -177978908 - L1MA8 LINE L1 -19 6272 5938 * 4471 182 12 11 chr5 25106613 25107469 -177978063 - L1PA16 LINE L1 -9 6157 5301 250 133 0 0 chr5 25107499 25107544 -177977988 - L1MA8 LINE L1 -4 6287 6243 6254 150 56 18 chr5 25107612 25108797 -177976735 + Tigger3b DNA MER2_type 1 1230 -1 61 90 0 0 chr5 25109150 25109316 -177976216 + AT_rich Low_complexity Low_complexity 1 166 0 1968 125 4 0 chr5 25110219 25110533 -177974999 + AluSx SINE Alu 5 319 0 256 296 44 72 chr5 25110706 25110956 -177974576 + L1MC4a LINE L1 4697 4939 -1207 1304 272 66 55 chr5 25111225 25111864 -177973668 + L1MC4a LINE L1 5265 5910 -1898 655 121 0 10 chr5 25111868 25111967 -177973565 + MER4A LTR ERV1 1 98 -566 1769 130 3 78 chr5 25111967 25112340 -177973192 + MER4A LTR ERV1 261 664 0 2389 93 91 48 chr5 25112343 25112417 -177973115 + MER4A-int LTR ERV1 1 70 -6528 4988 82 28 3 chr5 25112417 25113121 -177972411 - LTR30 LTR ERV1 0 722 1 2389 93 91 48 chr5 25113121 25113464 -177972068 + MER4A-int LTR ERV1 70 436 -6162 479 163 356 0 chr5 25113467 25113602 -177971930 + MER4A-int LTR ERV1 504 686 -5912 234 260 60 30 chr5 25113717 25113817 -177971715 + L2 LINE L2 1693 1795 -1519 808 247 33 2 chr5 25113844 25114049 -177971483 + MER4-int LTR ERV1 1987 2434 -3512 4285 115 25 31 chr5 25114066 25114975 -177970557 + MER4-int LTR ERV1 189 1147 -5611 384 22 0 0 chr5 25114975 25115020 -177970512 + (TG)n Simple_repeat Simple_repeat 2 46 0 3818 105 65 27 chr5 25115025 25115730 -177969802 + MER4-int LTR ERV1 1764 2495 -4103 1308 160 72 0 chr5 25115730 25115967 -177969565 - LTR8 LTR ERV1 -434 257 4 1051 155 42 68 chr5 25115969 25116569 -177968963 + MER4-int LTR ERV1 1861 4148 -2977 1020 169 42 35 chr5 25116585 25116845 -177968687 + MER4-int LTR ERV1 3418 3679 -2919 2625 144 73 32 chr5 25116846 25117381 -177968151 + MER4-int LTR ERV1 3837 4393 -2205 2640 76 0 0 chr5 25117381 25117735 -177967797 - L1P LINE L1 -887 5259 4906 3339 83 40 2 chr5 25117735 25118200 -177967332 + L1PA7 LINE L1 5665 6152 -2 2091 119 37 11 chr5 25118207 25118559 -177966973 + MER4-int LTR ERV1 4392 4752 -1846 319 371 59 11 chr5 25118720 25118906 -177966626 - LTR16C LTR ERVL 0 491 297 410 339 67 38 chr5 25120347 25120719 -177964813 - HERVL LTR ERVL -1708 3946 3564 1233 344 85 73 chr5 25120811 25121192 -177964340 - HERVL LTR ERVL -2262 3392 3017 2375 74 7 3 chr5 25121192 25121501 -177964031 - AluY SINE Alu -1 310 1 1233 344 85 73 chr5 25121501 25123000 -177962532 - HERVL LTR ERVL -2637 3017 1489 289 236 0 47 chr5 25125328 25125455 -177960077 + T-rich Low_complexity Low_complexity 4 124 0 40 67 0 0 chr5 25125751 25125826 -177959706 + AT_rich Low_complexity Low_complexity 1 75 0 29 84 0 0 chr5 25125955 25126026 -177959506 + AT_rich Low_complexity Low_complexity 1 71 0 4106 204 19 38 chr5 25126033 25127575 -177957957 - L1MA4 LINE L1 -5 6166 4591 7774 18 0 2 chr5 25127677 25129278 -177956254 + L1PA2 LINE L1 4550 6151 -4 5302 138 18 0 chr5 25129638 25130783 -177954749 - L1PA14 LINE L1 0 6161 5002 1403 119 0 0 chr5 25130783 25130977 -177954555 - AluY SINE Alu -23 288 95 30 0 0 0 chr5 25131106 25131136 -177954396 + AT_rich Low_complexity Low_complexity 1 30 0 529 314 122 45 chr5 25131173 25131708 -177953824 - L1MEc LINE L1 -1940 4275 3700 387 269 70 57 chr5 25131710 25131810 -177953722 - L1MEc LINE L1 -3198 3017 2920 1832 170 0 0 chr5 25131810 25132132 -177953400 - AluSx SINE Alu 0 322 1 387 269 70 57 chr5 25132132 25132331 -177953201 - L1MEc LINE L1 -3295 2920 2713 441 304 101 29 chr5 25132447 25132873 -177952659 - L1MEc LINE L1 -3639 2576 2148 290 255 39 29 chr5 25133355 25133457 -177952075 - L1MEc LINE L1 -4752 1644 1542 228 293 24 24 chr5 25133578 25133660 -177951872 + MER96 DNA MER1_type? 1 82 -93 9881 207 26 25 chr5 25133812 25135519 -177950013 - L1M LINE L1 -743 5403 3705 1427 176 81 31 chr5 25135519 25135876 -177949656 - THE1C LTR MaLR 0 375 1 9881 207 26 25 chr5 25135876 25136662 -177948870 - L1M LINE L1 -2441 3705 2921 1196 235 104 22 chr5 25136826 25137192 -177948340 - MSTD LTR MaLR 0 396 1 28 0 0 0 chr5 25137327 25137355 -177948177 + AT_rich Low_complexity Low_complexity 1 28 0 1256 229 29 58 chr5 25137521 25137897 -177947635 + MLT1A1 LTR MaLR 1 365 0 1400 132 5 0 chr5 25137964 25138184 -177947348 + L1PA13 LINE L1 5939 6159 -4 728 168 0 23 chr5 25138198 25138329 -177947203 + FLAM_C SINE Alu 1 128 -5 24 53 0 0 chr5 25138344 25138382 -177947150 + AT_rich Low_complexity Low_complexity 1 38 0 949 40 8 16 chr5 25138395 25138519 -177947013 - L1PA5 LINE L1 -5 6149 6027 317 24 24 0 chr5 25138525 25138567 -177946965 + (TCC)n Simple_repeat Simple_repeat 3 45 0 23 0 0 0 chr5 25138922 25138945 -177946587 + AT_rich Low_complexity Low_complexity 1 23 0 197 277 0 0 chr5 25139529 25139576 -177945956 - MER5A DNA MER1_type -3 186 140 2301 64 30 0 chr5 25140326 25140623 -177944909 + AluY SINE Alu 1 306 -5 2077 121 7 0 chr5 25141017 25141315 -177944217 + AluSx SINE Alu 1 300 -12 1597 234 31 50 chr5 25141899 25142381 -177943151 - MLT1D LTR MaLR -7 498 26 910 235 88 22 chr5 25142989 25143261 -177942271 - MER2 DNA MER2_type 0 345 56 24 32 0 0 chr5 25143524 25143555 -177941977 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 25144014 25144039 -177941493 + AT_rich Low_complexity Low_complexity 1 25 0 192 339 100 23 chr5 25144239 25144369 -177941163 - MIR SINE MIR -75 187 48 2073 116 0 0 chr5 25144618 25144938 -177940594 - AluSx SINE Alu 0 320 1 1951 151 7 0 chr5 25146128 25146419 -177939113 - AluSq SINE Alu -18 295 3 1692 175 0 4 chr5 25146492 25146772 -177938760 + AluSx SINE Alu 11 289 -23 2111 134 73 20 chr5 25147188 25147532 -177938000 - THE1B LTR MaLR 0 364 3 11220 113 1 0 chr5 25147534 25149113 -177936419 - THE1B-int LTR MaLR 0 1580 1 1809 155 75 31 chr5 25149113 25149462 -177936070 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 25150584 25150605 -177934927 + AT_rich Low_complexity Low_complexity 1 21 0 23 101 0 0 chr5 25151120 25151199 -177934333 + AT_rich Low_complexity Low_complexity 1 79 0 30 83 0 0 chr5 25151315 25151387 -177934145 + AT_rich Low_complexity Low_complexity 1 72 0 23 33 0 0 chr5 25151568 25151598 -177933934 + AT_rich Low_complexity Low_complexity 1 30 0 261 236 34 67 chr5 25151678 25151767 -177933765 - L2 LINE L2 -3 3269 3184 223 330 68 0 chr5 25151996 25152099 -177933433 + MIR SINE MIR 82 191 -71 256 289 91 44 chr5 25152772 25153140 -177932392 + L1M4 LINE L1 5297 5574 -604 506 291 72 52 chr5 25153439 25153690 -177931842 + L1MCc LINE L1 343 598 -5825 974 292 88 23 chr5 25153732 25154163 -177931369 + L1MCc LINE L1 743 1201 -5222 292 216 103 10 chr5 25154195 25154320 -177931212 + L1MCc LINE L1 1440 1551 -4871 597 296 13 52 chr5 25154489 25154639 -177930893 - MER58A DNA MER1_type -2196 224 85 861 261 61 68 chr5 25154639 25155034 -177930498 + MSTD LTR MaLR 3 394 -2 597 296 13 52 chr5 25155034 25155116 -177930416 - MER58A DNA MER1_type -2335 85 1 202 361 0 0 chr5 25155169 25155230 -177930302 + L2 LINE L2 2698 2758 -556 282 337 111 12 chr5 25155388 25155560 -177929972 + L2 LINE L2 3125 3313 0 736 269 131 64 chr5 25155962 25156504 -177929028 + L1MC4a LINE L1 6448 6997 -811 1346 266 84 62 chr5 25156507 25157019 -177928513 + L1MC4 LINE L1 7238 7768 -274 1723 165 29 38 chr5 25157019 25157334 -177928198 - AluSx SINE Alu 0 312 1 1346 266 84 62 chr5 25157334 25157461 -177928071 + L1MC4 LINE L1 7768 7891 -151 2503 86 8 6 chr5 25157791 25158142 -177927390 - THE1A LTR MaLR -3 352 1 26 30 0 0 chr5 25158677 25158710 -177926822 + AT_rich Low_complexity Low_complexity 1 33 0 1396 208 10 20 chr5 25158944 25159237 -177926295 + AluJo SINE Alu 1 290 -22 1835 158 61 25 chr5 25159328 25159690 -177925842 + THE1C LTR MaLR 1 375 0 7968 165 25 55 chr5 25159693 25161319 -177924213 + THE1C-int LTR MaLR 4 1580 0 1451 165 135 15 chr5 25161321 25161654 -177923878 + THE1C LTR MaLR 3 375 0 218 372 13 0 chr5 25161764 25161842 -177923690 - MER5B DNA MER1_type -51 127 49 34021 42 31 2 chr5 25162561 25166834 -177918698 + L1P LINE L1 7 4404 -1742 27 29 0 0 chr5 25168216 25168250 -177917282 + AT_rich Low_complexity Low_complexity 1 34 0 2204 165 24 21 chr5 25168413 25168831 -177916701 + MSTA LTR MaLR 6 424 -4 827 233 17 0 chr5 25168836 25169012 -177916520 + MER58A DNA MER1_type 46 224 0 25 31 0 0 chr5 25170605 25170637 -177914895 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 25170707 25170728 -177914804 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 25170891 25170916 -177914616 + AT_rich Low_complexity Low_complexity 1 25 0 293 95 0 0 chr5 25171326 25171368 -177914164 + MLT2A1 LTR ERVL 390 431 -13 292 127 0 28 chr5 25171368 25171439 -177914093 + (TA)n Simple_repeat Simple_repeat 1 69 0 2135 122 40 92 chr5 25171474 25171900 -177913632 - MLT2A1 LTR ERVL -40 404 1 2065 213 12 2 chr5 25171900 25172309 -177913223 + MLT2C2 LTR ERVL 4 416 -48 1344 203 30 8 chr5 25172643 25172909 -177912623 - MLT1A1 LTR MaLR -80 285 14 260 210 113 0 chr5 25172921 25172983 -177912549 + Charlie1 DNA MER1_type 2675 2743 -18 220 410 50 3 chr5 25173045 25173328 -177912204 - L3 LINE CR1 -108 1469 1174 22 35 0 0 chr5 25173606 25173635 -177911897 + AT_rich Low_complexity Low_complexity 1 29 0 746 104 0 0 chr5 25173732 25173870 -177911662 - AluY SINE Alu 0 317 180 24 0 0 0 chr5 25173980 25174004 -177911528 + AT_rich Low_complexity Low_complexity 1 24 0 1930 244 84 36 chr5 25174025 25176001 -177909531 - L1MB7 LINE L1 -18 6166 3999 851 86 86 0 chr5 25176001 25176129 -177909403 + MER85 DNA T2_type 1 139 0 1930 244 84 36 chr5 25176129 25176586 -177908946 - L1MB7 LINE L1 -2185 3999 3565 1303 270 69 18 chr5 25176586 25177263 -177908269 - L1M4 LINE L1 -2354 3792 3081 * 2912 249 55 79 chr5 25177257 25177283 -177908249 - L1MC/D LINE L1 -743 5403 5378 200 35 35 0 chr5 25177283 25177312 -177908220 + (TTA)n Simple_repeat Simple_repeat 3 32 0 2912 249 55 79 chr5 25177312 25177787 -177907745 - L1MC/D LINE L1 -768 5378 4893 9490 85 15 1 chr5 25177787 25179885 -177905647 - L1PA7 LINE L1 -4 6150 4031 2912 249 55 79 chr5 25179885 25180300 -177905232 - L1MC/D LINE L1 -1253 4893 4470 2090 90 0 52 chr5 25180300 25180610 -177904922 + AluSg SINE Alu 1 294 -16 2912 249 55 79 chr5 25180610 25181527 -177904005 - L1MC/D LINE L1 -1676 4470 3726 1215 256 75 35 chr5 25181532 25182420 -177903112 - L1ME1 LINE L1 -272 5894 4964 23 54 0 0 chr5 25183610 25183647 -177901885 + AT_rich Low_complexity Low_complexity 1 37 0 2044 132 10 0 chr5 25185968 25186272 -177899260 - AluSx SINE Alu -2 310 4 280 340 40 10 chr5 25187143 25187243 -177898289 - L2 LINE L2 -7 3306 3204 537 257 80 5 chr5 25188188 25188375 -177897157 - MER67D LTR ERV1 -8 506 306 1187 176 59 99 chr5 25188419 25188743 -177896789 - MER67D LTR ERV1 -203 311 1 711 151 120 0 chr5 25189460 25189632 -177895900 - L1MA9 LINE L1 -9 6303 6112 7308 45 1 0 chr5 25189657 25191237 -177894295 - L1PA5 LINE L1 -3 6151 4570 22427 52 9 2 chr5 25191238 25194138 -177891394 + L1PA5 LINE L1 1631 4551 -1595 1417 188 71 8 chr5 25194178 25194444 -177891088 - AluJb SINE Alu -16 296 14 280 239 0 0 chr5 25194444 25194490 -177891042 - AluJ/monomer SINE Alu -257 46 1 1392 224 41 0 chr5 25194498 25194792 -177890740 - AluJo SINE Alu -6 306 1 26 0 0 0 chr5 25194831 25194857 -177890675 + AT_rich Low_complexity Low_complexity 1 26 0 243 322 112 34 chr5 25195128 25195333 -177890199 + L3 LINE CR1 888 1108 -469 552 316 116 12 chr5 25196400 25196720 -177888812 - MLT1K LTR MaLR -24 564 212 277 247 43 21 chr5 25196722 25196815 -177888717 - MLT1I LTR MaLR -8 401 307 1064 124 5 54 chr5 25197573 25197759 -177887773 + AluSg/x SINE Alu 133 309 -1 440 275 127 16 chr5 25198968 25199346 -177886186 + L1MC5 LINE L1 7327 7746 -215 225 279 62 0 chr5 25200545 25200674 -177884858 - L1ME LINE L1 -272 5849 5713 440 333 39 16 chr5 25200745 25201000 -177884532 + MLT1J1 LTR MaLR 7 267 -179 3017 221 62 29 chr5 25201148 25203000 -177882532 - L1MA9 LINE L1 -4 6330 4544 * 3271 242 15 7 chr5 25202987 25203852 -177881680 + L1 LINE L1 3304 4175 -1971 11855 217 23 77 chr5 25203889 25204260 -177881272 + L1PA15 LINE L1 1323 1712 -5104 1569 201 27 0 chr5 25204260 25204553 -177880979 - AluJb SINE Alu -11 301 1 11855 217 23 77 chr5 25204553 25204735 -177880797 + L1PA15 LINE L1 1712 1902 -4914 1977 142 23 7 chr5 25204735 25205038 -177880494 + AluSq SINE Alu 1 308 -5 11855 217 23 77 chr5 25205038 25208647 -177876885 + L1PA15 LINE L1 1902 5063 -1753 519 100 0 12 chr5 25208647 25208727 -177876805 + MADE1 DNA Mariner 2 80 0 11855 217 23 77 chr5 25208727 25210391 -177875141 + L1PA15 LINE L1 5063 6814 -2 1317 171 46 48 chr5 25210452 25210844 -177874688 + L1 LINE L1 4152 4542 -1604 291 380 38 5 chr5 25211905 25212089 -177873443 - LTR33 LTR ERVL -313 208 19 707 233 85 17 chr5 25213929 25214105 -177871427 - MLT1B LTR MaLR -3 387 200 244 206 24 67 chr5 25214449 25214614 -177870918 + (TTATA)n Simple_repeat Simple_repeat 1 158 0 29 0 0 0 chr5 25214757 25214786 -177870746 + AT_rich Low_complexity Low_complexity 1 29 0 225 65 0 0 chr5 25215012 25215043 -177870489 + (TG)n Simple_repeat Simple_repeat 2 32 0 279 289 22 0 chr5 25215043 25215133 -177870399 + (TA)n Simple_repeat Simple_repeat 2 93 0 22 56 0 0 chr5 25215305 25215341 -177870191 + AT_rich Low_complexity Low_complexity 1 36 0 6802 68 0 8 chr5 25215872 25217000 -177868532 - L1PA7 LINE L1 0 6154 5040 294 234 28 28 chr5 25217000 25217107 -177868425 + MER90 LTR ERV1 365 471 -104 526 174 146 56 chr5 25217113 25217257 -177868275 - MER39 LTR ERV1 -2 682 384 663 238 24 30 chr5 25217268 25217436 -177868096 - MER39 LTR ERV1 -201 506 340 451 252 94 16 chr5 25217558 25217685 -177867847 - MER39 LTR ERV1 -569 138 2 38 0 0 0 chr5 25217802 25217840 -177867692 + AT_rich Low_complexity Low_complexity 1 38 0 266 148 37 0 chr5 25218259 25218313 -177867219 + L1MC4 LINE L1 6648 6703 -1339 252 86 0 0 chr5 25218313 25218348 -177867184 + (TA)n Simple_repeat Simple_repeat 1 35 0 274 351 80 66 chr5 25218644 25218994 -177866538 + L2 LINE L2 2918 3272 0 484 295 52 6 chr5 25220250 25220423 -177865109 - MIR SINE MIR -14 248 68 1148 235 40 52 chr5 25220677 25221099 -177864433 - LTR56 LTR ERV1 -20 425 9 375 211 29 44 chr5 25221362 25221593 -177863939 - HERVS71 LTR ERV1 -840 5918 4646 2559 40 3 3 chr5 25222520 25222819 -177862713 + AluY SINE Alu 6 304 -7 2528 116 6 6 chr5 25223696 25224059 -177861473 - THE1B LTR MaLR 0 364 2 2074 86 7 0 chr5 25224670 25224974 -177860558 - L1P LINE L1 -860 5286 4981 3062 62 25 2 chr5 25224974 25225378 -177860154 + L1PA7 LINE L1 5730 6144 -10 1666 199 68 27 chr5 25225710 25225937 -177859595 - MSTB1 LTR MaLR 0 432 179 180 0 0 0 chr5 25225937 25225957 -177859575 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1666 199 68 27 chr5 25225957 25226142 -177859390 - MSTB1 LTR MaLR -253 179 3 285 269 65 11 chr5 25226251 25226344 -177859188 - HERVS71 LTR ERV1 -3390 5588 5491 713 224 13 70 chr5 25226597 25226825 -177858707 + L1P LINE L1 4605 4819 -1327 6170 102 20 0 chr5 25226837 25228273 -177857259 + L1PA11 LINE L1 4719 6172 -2 23 0 0 0 chr5 25229413 25229436 -177856096 + AT_rich Low_complexity Low_complexity 1 23 0 8622 116 23 2 chr5 25229670 25230927 -177854605 + HSMAR1 DNA Mariner 5 1287 0 1050 226 128 0 chr5 25231204 25231430 -177854102 - AluJo SINE Alu -56 256 2 207 0 0 0 chr5 25233150 25233173 -177852359 + (A)n Simple_repeat Simple_repeat 1 23 0 871 218 53 57 chr5 25233810 25234220 -177851312 - LTR56 LTR ERV1 0 437 44 186 317 161 41 chr5 25235120 25235511 -177850021 - L2 LINE L2 -791 2523 2086 404 291 55 12 chr5 25235572 25235737 -177849795 - LTR33A LTR ERVL -5 518 347 231 329 0 0 chr5 25236575 25236648 -177848884 - LTR16A1 LTR ERVL -11 446 374 1700 224 35 69 chr5 25237995 25238127 -177847405 - MLT1C LTR MaLR -2 465 330 2494 68 3 0 chr5 25238127 25238437 -177847095 - AluY SINE Alu 0 311 1 1700 224 35 69 chr5 25238437 25238785 -177846747 - MLT1C LTR MaLR -137 330 1 207 167 0 0 chr5 25238820 25238856 -177846676 + (TG)n Simple_repeat Simple_repeat 1 36 0 458 348 81 24 chr5 25238981 25239464 -177846068 - HERVL LTR ERVL -1900 3096 2816 27 0 0 0 chr5 25239668 25239695 -177845837 + AT_rich Low_complexity Low_complexity 1 27 0 227 37 0 0 chr5 25239958 25239985 -177845547 + L1MA1 LINE L1 6232 6258 -44 299 261 49 44 chr5 25240226 25240382 -177845150 - HERVL LTR ERVL -4083 1681 1484 230 280 108 11 chr5 25240478 25240571 -177844961 - MLT1G1 LTR MaLR -18 577 476 1991 127 0 3 chr5 25241529 25241974 -177843558 + AluY SINE Alu 1 444 0 729 151 96 36 chr5 25242340 25242506 -177843026 + MER96B DNA MER1_type? 4 179 -238 3901 176 32 7 chr5 25243955 25245250 -177840282 - L1PA15 LINE L1 -181 5984 4662 4106 251 40 31 chr5 25245280 25246562 -177838970 - L1PA13 LINE L1 -4470 2327 564 1794 198 110 0 chr5 25246636 25247019 -177838513 + MSTB1 LTR MaLR 5 429 -3 194 361 167 27 chr5 25247022 25247460 -177838072 + L2 LINE L2 926 1424 -1890 270 236 11 34 chr5 25248431 25248520 -177837012 + L1ME4a LINE L1 5970 6056 -65 3870 176 89 50 chr5 25248566 25249523 -177836009 - L1MA9 LINE L1 -30 6282 5289 637 239 15 20 chr5 25249526 25249723 -177835809 + L1MA9 LINE L1 5096 5291 -855 1860 79 35 28 chr5 25249885 25250175 -177835357 - AluY SINE Alu -19 292 1 1916 180 16 0 chr5 25250183 25250560 -177834972 - L1MB1 LINE L1 -5 6163 5781 25 0 0 0 chr5 25251012 25251037 -177834495 + AT_rich Low_complexity Low_complexity 1 25 0 2454 54 0 0 chr5 25251100 25251395 -177834137 - AluY SINE Alu -5 306 12 243 287 10 30 chr5 25251677 25251778 -177833754 + (TATATG)n Simple_repeat Simple_repeat 2 100 0 38 51 0 0 chr5 25251907 25251966 -177833566 + AT_rich Low_complexity Low_complexity 1 59 0 26 93 0 0 chr5 25252199 25252274 -177833258 + AT_rich Low_complexity Low_complexity 1 75 0 22 35 0 0 chr5 25252573 25252602 -177832930 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 25252663 25252687 -177832845 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 25252728 25252766 -177832766 + AT_rich Low_complexity Low_complexity 1 38 0 214 270 0 0 chr5 25254141 25254204 -177831328 + T-rich Low_complexity Low_complexity 1 63 0 230 95 0 24 chr5 25254322 25254364 -177831168 + Alu SINE Alu 241 281 -20 1418 185 22 25 chr5 25254464 25254740 -177830792 + AluJb SINE Alu 38 312 0 9976 164 48 3 chr5 25254899 25255506 -177830026 + Tigger1 DNA MER2_type 1 579 -1839 1885 86 4 0 chr5 25255506 25255750 -177829782 + AluY SINE Alu 51 295 -16 9976 164 48 3 chr5 25255750 25256954 -177828578 + Tigger1 DNA MER2_type 579 1893 -525 6070 64 232 72 chr5 25256955 25258046 -177827486 - MER11A LTR ERVK 0 1266 1 2596 183 27 9 chr5 25258046 25258567 -177826965 + Tigger1 DNA MER2_type 1889 2418 0 1384 328 64 19 chr5 25259214 25259727 -177825805 + L1M4b LINE L1 182 717 -6142 1187 241 13 77 chr5 25259730 25260120 -177825412 + MLT1A2 LTR MaLR 4 368 -6 3286 259 66 24 chr5 25260126 25261803 -177823729 + L1M4b LINE L1 713 2493 -4464 1016 209 27 128 chr5 25261842 25262248 -177823284 - MLT1A1 LTR MaLR 0 365 1 1183 290 36 32 chr5 25262323 25263364 -177822168 + L1M4b LINE L1 2469 3467 -3490 494 310 70 20 chr5 25263437 25263740 -177821792 - L1ME LINE L1 -4999 1071 751 23 0 0 0 chr5 25263796 25263819 -177821713 + AT_rich Low_complexity Low_complexity 1 23 0 212 211 19 19 chr5 25264294 25264346 -177821186 + (TATG)n Simple_repeat Simple_repeat 4 55 0 369 0 0 0 chr5 25264677 25264718 -177820814 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 25265487 25265515 -177820017 + AT_rich Low_complexity Low_complexity 1 28 0 969 244 103 53 chr5 25265908 25266248 -177819284 + MER57A LTR ERV1 47 403 0 729 280 55 21 chr5 25266251 25266487 -177819045 + MER57A-int LTR ERV1 3 246 -7291 21 36 0 0 chr5 25267105 25267133 -177818399 + AT_rich Low_complexity Low_complexity 1 28 0 202 152 0 0 chr5 25267317 25267331 -177818201 + (CAAA)n Simple_repeat Simple_repeat 2 15 -19 1921 167 0 3 chr5 25267331 25267642 -177817890 + AluSx SINE Alu 1 310 -2 202 152 0 0 chr5 25267642 25267660 -177817872 + (CAAA)n Simple_repeat Simple_repeat 14 34 0 973 222 125 27 chr5 25267709 25268038 -177817494 + MER57A-int LTR ERV1 1066 1426 -3510 1908 158 0 3 chr5 25268046 25268331 -177817201 + AluSx SINE Alu 4 287 -25 657 144 10 0 chr5 25268524 25268628 -177816904 + MER34 LTR ERV1 133 237 -305 360 219 0 0 chr5 25268628 25268692 -177816840 + MER34 LTR ERV1 476 539 -3 1544 328 25 28 chr5 25268949 25269669 -177815863 + MER57-int LTR ERV1 6253 6970 -567 862 182 158 111 chr5 25269893 25270234 -177815298 + MER57A LTR ERV1 45 401 -2 241 152 0 0 chr5 25270943 25270989 -177814543 - LTR66 LTR ERVL -171 439 394 611 231 86 27 chr5 25271643 25271829 -177813703 - MER105 DNA DNA -2 202 6 22 0 0 0 chr5 25272379 25272401 -177813131 + AT_rich Low_complexity Low_complexity 1 22 0 190 364 26 0 chr5 25272437 25272514 -177813018 + MIR SINE MIR 74 152 -110 21 36 0 0 chr5 25274079 25274107 -177811425 + AT_rich Low_complexity Low_complexity 1 28 0 32 26 0 0 chr5 25274190 25274229 -177811303 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 25276921 25276944 -177808588 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 25277284 25277305 -177808227 + AT_rich Low_complexity Low_complexity 1 21 0 243 234 130 0 chr5 25277729 25277806 -177807726 + L1MC/D LINE L1 5728 5814 -1994 22 35 0 0 chr5 25278188 25278217 -177807315 + AT_rich Low_complexity Low_complexity 1 29 0 186 133 0 0 chr5 25278670 25278700 -177806832 + (TG)n Simple_repeat Simple_repeat 1 30 0 201 121 0 0 chr5 25279043 25279076 -177806456 + (CA)n Simple_repeat Simple_repeat 2 34 0 358 309 0 0 chr5 25281088 25281172 -177804360 + MLT1E LTR MaLR 324 407 -186 1139 234 53 30 chr5 25281553 25281946 -177803586 - LTR52 LTR ERVL -19 402 1 535 324 48 20 chr5 25282068 25282318 -177803214 - MLT1H LTR MaLR -292 257 1 22 35 0 0 chr5 25283101 25283130 -177802402 + AT_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr5 25283322 25283361 -177802171 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 25284141 25284163 -177801369 + AT_rich Low_complexity Low_complexity 1 22 0 1359 229 104 69 chr5 25284473 25285008 -177800524 + Charlie1 DNA MER1_type 47 609 -2152 1280 238 13 17 chr5 25285008 25285335 -177800197 + AluJo SINE Alu 1 302 0 1359 229 104 69 chr5 25285335 25285424 -177800108 + Charlie1 DNA MER1_type 609 693 -2068 291 182 80 34 chr5 25285427 25285515 -177800017 + Charlie1 DNA MER1_type 921 1012 -1749 1109 221 130 109 chr5 25285531 25286047 -177799485 + Charlie1 DNA MER1_type 1622 2126 -635 2278 62 0 3 chr5 25286047 25286337 -177799195 + AluY SINE Alu 1 289 -22 1109 221 130 109 chr5 25286337 25286606 -177798926 + Charlie1 DNA MER1_type 2126 2388 -373 1778 136 38 14 chr5 25286606 25286893 -177798639 - AluSx SINE Alu -6 306 13 1109 221 130 109 chr5 25286893 25286979 -177798553 + Charlie1 DNA MER1_type 2388 2471 -290 1938 138 37 0 chr5 25286979 25287276 -177798256 - AluSx SINE Alu -4 308 1 1109 221 130 109 chr5 25287276 25287440 -177798092 + Charlie1 DNA MER1_type 2471 2681 -80 560 68 11 23 chr5 25287440 25287528 -177798004 - L1MA3 LINE L1 -13 6292 6206 26 30 0 0 chr5 25287539 25287572 -177797960 + AT_rich Low_complexity Low_complexity 1 33 0 314 156 104 65 chr5 25287895 25287972 -177797560 - Charlie1 DNA MER1_type 0 2761 2682 5130 173 23 8 chr5 25287973 25289818 -177795714 - L1MA3 LINE L1 -156 6149 4273 24 32 0 0 chr5 25289864 25289895 -177795637 + AT_rich Low_complexity Low_complexity 1 31 0 42565 36 21 1 chr5 25290746 25296778 -177788754 - L1PA3 LINE L1 0 6155 2 24 0 0 0 chr5 25297199 25297223 -177788309 + AT_rich Low_complexity Low_complexity 1 24 0 311 171 29 0 chr5 25298959 25299029 -177786503 + (TATG)n Simple_repeat Simple_repeat 4 75 0 1927 154 148 13 chr5 25299781 25300158 -177785374 + MSTA LTR MaLR 1 428 0 26 50 0 0 chr5 25300558 25300598 -177784934 + AT_rich Low_complexity Low_complexity 1 40 0 206 265 0 0 chr5 25300651 25300700 -177784832 + (TA)n Simple_repeat Simple_repeat 1 49 0 210 208 0 0 chr5 25301275 25301323 -177784209 + CT-rich Low_complexity Low_complexity 5 52 0 1904 131 45 0 chr5 25301825 25301944 -177783588 + AluSq SINE Alu 1 113 -200 887 0 0 10 chr5 25301944 25302048 -177783484 + (TAAAA)n Simple_repeat Simple_repeat 2 104 0 1904 131 45 0 chr5 25302048 25302219 -177783313 + AluSq SINE Alu 113 304 -9 22 0 0 0 chr5 25302263 25302285 -177783247 + AT_rich Low_complexity Low_complexity 1 22 0 245 273 42 79 chr5 25302451 25302616 -177782916 + MLT1L LTR MaLR 417 575 -40 21 36 0 0 chr5 25302741 25302769 -177782763 + AT_rich Low_complexity Low_complexity 1 28 0 2282 107 0 0 chr5 25303256 25303566 -177781966 - AluSg SINE Alu 0 310 1 24 0 0 0 chr5 25304981 25305005 -177780527 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 25306029 25306052 -177779480 + AT_rich Low_complexity Low_complexity 1 23 0 210 171 0 0 chr5 25306104 25306139 -177779393 + A-rich Low_complexity Low_complexity 1 35 0 199 333 42 85 chr5 25306743 25306932 -177778600 + L3 LINE CR1 538 718 -859 588 263 44 35 chr5 25307230 25307458 -177778074 - MER115 DNA AcHobo -10 683 454 348 336 137 38 chr5 25307455 25307747 -177777785 - LTR16A1 LTR ERVL -136 321 1 * 1250 359 70 32 chr5 25307874 25309108 -177776424 - ERVL LTR ERVL -380 5384 4103 434 333 46 56 chr5 25309241 25309635 -177775897 - ERVL LTR ERVL -1892 3872 3483 2272 180 31 10 chr5 25309852 25310269 -177775263 + MSTB LTR MaLR 1 426 0 367 283 19 0 chr5 25310647 25310753 -177774779 + HERV16 LTR ERVL 2683 2790 -2206 339 44 0 0 chr5 25310755 25310800 -177774732 + (CA)n Simple_repeat Simple_repeat 2 46 0 236 250 17 0 chr5 25310904 25310964 -177774568 - LTR16A1 LTR ERVL -385 72 12 2084 99 45 3 chr5 25311229 25311521 -177774011 - AluSc SINE Alu -4 305 2 23 33 0 0 chr5 25311780 25311810 -177773722 + AT_rich Low_complexity Low_complexity 1 30 0 30 45 0 0 chr5 25311997 25312041 -177773491 + AT_rich Low_complexity Low_complexity 1 44 0 802 71 18 0 chr5 25312142 25312254 -177773278 + L1PA7 LINE L1 6038 6151 -3 1095 255 59 47 chr5 25312260 25312769 -177772763 - L1ME1 LINE L1 -5 6161 5647 201 245 43 0 chr5 25312774 25312868 -177772664 + T-rich Low_complexity Low_complexity 4 101 0 * 292 260 35 0 chr5 25312821 25312990 -177772542 + (TA)n Simple_repeat Simple_repeat 2 176 0 593 270 53 11 chr5 25313022 25313211 -177772321 - L1ME1 LINE L1 -1886 4260 4064 1962 130 16 3 chr5 25313211 25313519 -177772013 - THE1C LTR MaLR 0 375 64 650 268 6 28 chr5 25313627 25313827 -177771705 - MLT2C1 LTR ERVL -37 427 164 1267 125 0 0 chr5 25313829 25314013 -177771519 + AluSc SINE Alu 126 309 0 608 238 6 25 chr5 25314029 25314142 -177771390 - MLT2C1 LTR ERVL -227 170 59 13007 171 21 3 chr5 25314142 25316517 -177769015 - Tigger1 DNA MER2_type 0 2418 1 608 238 6 25 chr5 25316517 25316563 -177768969 - MLT2C1 LTR ERVL -338 59 14 1901 100 89 0 chr5 25317285 25317555 -177767977 + AluSg SINE Alu 1 294 -16 4298 170 36 26 chr5 25318107 25319325 -177766207 + L1PA16 LINE L1 4930 6161 -5 928 163 48 12 chr5 25319498 25319664 -177765868 - MLT2B2 LTR ERVL -343 172 1 24 0 0 0 chr5 25319816 25319840 -177765692 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5 25320508 25320544 -177764988 + AT_rich Low_complexity Low_complexity 1 36 0 216 286 0 0 chr5 25321267 25321330 -177764202 + T-rich Low_complexity Low_complexity 1 63 0 20352 53 5 2 chr5 25322343 25324980 -177760552 - L1P LINE L1 -1871 4275 1631 7353 39 1 1 chr5 25324981 25326557 -177758975 + L1PA5 LINE L1 4570 6146 -8 793 169 26 32 chr5 25326650 25326804 -177758728 - MSTA LTR MaLR -58 370 218 1742 281 40 12 chr5 25327145 25327797 -177757735 - L1MC4 LINE L1 -479 7563 6894 318 263 88 9 chr5 25327792 25327906 -177757626 + L1MC4 LINE L1 7547 7669 -373 * 762 264 104 22 chr5 25327948 25328350 -177757182 + L1MC4 LINE L1 7605 8039 -3 185 143 0 41 chr5 25328565 25328614 -177756918 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 291 100 29 0 chr5 25329292 25329361 -177756171 - L1PA6 LINE L1 -3 6151 6078 400 321 33 72 chr5 25330951 25331340 -177754192 + HAL1b LINE L1 62 435 -913 21 0 0 0 chr5 25331538 25331559 -177753973 + AT_rich Low_complexity Low_complexity 1 21 0 250 329 92 0 chr5 25331790 25331942 -177753590 - L1MC4 LINE L1 -2337 5471 5306 189 0 0 0 chr5 25332207 25332228 -177753304 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 535 174 107 40 chr5 25332399 25332548 -177752984 + MER76 LTR ERV 12 170 -518 25 0 0 0 chr5 25333062 25333087 -177752445 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 25333536 25333569 -177751963 + AT_rich Low_complexity Low_complexity 1 33 0 5200 169 19 28 chr5 25333569 25333848 -177751684 + L1MA4A LINE L1 5105 5385 -918 297 0 0 0 chr5 25333848 25333881 -177751651 + (TG)n Simple_repeat Simple_repeat 2 34 0 2107 128 3 0 chr5 25333889 25334186 -177751346 - AluSx SINE Alu -14 298 1 5200 169 19 28 chr5 25334186 25335101 -177750431 + L1MA4A LINE L1 5392 6298 -5 1902 148 0 7 chr5 25335286 25335589 -177749943 - AluSx SINE Alu -11 301 1 412 171 40 0 chr5 25335617 25335693 -177749839 + AluS SINE Alu 1 79 -223 1600 158 18 0 chr5 25335817 25336101 -177749431 + AluSx SINE Alu 24 312 0 385 280 136 23 chr5 25336636 25337033 -177748499 - HAL1b LINE L1 -55 1293 852 398 288 9 9 chr5 25337345 25337456 -177748076 - HAL1b LINE L1 -903 445 335 21 0 0 0 chr5 25338507 25338528 -177747004 + AT_rich Low_complexity Low_complexity 1 21 0 1635 100 4 0 chr5 25338865 25339094 -177746438 - MER30 DNA MER1_type 0 230 1 2144 121 0 31 chr5 25339904 25340226 -177745306 - AluSx SINE Alu 0 312 1 209 184 41 0 chr5 25340951 25341000 -177744532 + A-rich Low_complexity Low_complexity 1 51 0 260 385 107 6 chr5 25341053 25341380 -177744152 + L2 LINE L2 2272 2631 -683 337 253 21 0 chr5 25341491 25341586 -177743946 - MER58 DNA MER1_type -22 2398 2302 292 341 47 8 chr5 25342043 25342172 -177743360 + L2 LINE L2 2733 2866 -448 309 327 84 40 chr5 25342254 25342551 -177742981 + L2 LINE L2 3003 3312 -1 1307 229 26 23 chr5 25343011 25343313 -177742219 + AluJo SINE Alu 3 305 -7 41 36 0 0 chr5 25343313 25343368 -177742164 + AT_rich Low_complexity Low_complexity 1 55 0 387 309 18 36 chr5 25344266 25344486 -177741046 - HAL1b LINE L1 -902 446 231 204 40 0 0 chr5 25344916 25344941 -177740591 + (TC)n Simple_repeat Simple_repeat 1 25 0 261 146 0 0 chr5 25344957 25345005 -177740527 + (TA)n Simple_repeat Simple_repeat 1 48 0 1266 151 55 0 chr5 25345842 25346060 -177739472 + MER30 DNA MER1_type 1 230 0 380 324 27 0 chr5 25346502 25346650 -177738882 - MER104 DNA Tc2 -28 152 1 39 22 0 0 chr5 25347508 25347554 -177737978 + AT_rich Low_complexity Low_complexity 1 46 0 552 210 0 0 chr5 25348097 25348197 -177737335 + Tigger3(Golem) DNA MER2_type 1 100 -2929 2451 75 0 0 chr5 25348202 25348509 -177737023 - AluY SINE Alu -4 307 1 3707 145 68 20 chr5 25348519 25349230 -177736302 + Tigger3(Golem) DNA MER2_type 2285 3029 0 439 366 25 15 chr5 25349732 25349974 -177735558 - ERVL LTR ERVL -2835 2209 1910 216 0 0 0 chr5 25351081 25351105 -177734427 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 614 219 4 122 chr5 25351924 25352161 -177733371 + MER63A DNA MER1_type 2 210 0 282 302 123 0 chr5 25352161 25352267 -177733265 - LTR33 LTR ERVL -131 390 272 477 283 66 15 chr5 25352303 25352501 -177733031 - LTR33 LTR ERVL -306 215 8 390 162 0 0 chr5 25352501 25352575 -177732957 + (TA)n Simple_repeat Simple_repeat 2 75 0 1396 214 45 60 chr5 25353310 25353712 -177731820 - MSTD LTR MaLR 0 396 1 24 85 0 0 chr5 25353810 25353869 -177731663 + AT_rich Low_complexity Low_complexity 1 59 0 216 291 0 0 chr5 25353932 25353987 -177731545 - MIR SINE MIR -145 117 63 38 0 0 0 chr5 25354385 25354423 -177731109 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 25354801 25354823 -177730709 + AT_rich Low_complexity Low_complexity 1 22 0 198 192 0 0 chr5 25354946 25354998 -177730534 + (TA)n Simple_repeat Simple_repeat 2 53 0 812 256 20 10 chr5 25355005 25355204 -177730328 - MLT1B LTR MaLR 0 390 190 2427 43 0 3 chr5 25355279 25355614 -177729918 - AluY SINE Alu 0 334 1 1039 72 7 26 chr5 25355621 25355774 -177729758 - L1PA8 LINE L1 -4 6168 6019 985 57 0 0 chr5 25355774 25355898 -177729634 + L1PA8 LINE L1 5733 5856 -316 649 235 24 18 chr5 25355898 25356064 -177729468 - MLT1B LTR MaLR -206 168 2 23 0 0 0 chr5 25356096 25356119 -177729413 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 25356299 25356328 -177729204 + AT_rich Low_complexity Low_complexity 1 29 0 2261 114 0 0 chr5 25357618 25357917 -177727615 + AluSx SINE Alu 5 303 -9 26 0 0 0 chr5 25357983 25358009 -177727523 + AT_rich Low_complexity Low_complexity 1 26 0 411 123 0 0 chr5 25359382 25359463 -177726069 + (TTC)n Simple_repeat Simple_repeat 2 82 0 1401 196 28 25 chr5 25359467 25359753 -177725779 - AluJo SINE Alu -9 303 17 360 0 0 0 chr5 25359754 25359794 -177725738 + (CA)n Simple_repeat Simple_repeat 2 41 0 706 299 55 13 chr5 25359824 25360007 -177725525 - L1MC4a LINE L1 -1870 5938 5764 3439 65 0 7 chr5 25360007 25360456 -177725076 + L1PA5 LINE L1 5696 6141 -13 706 299 55 13 chr5 25360456 25360653 -177724879 - L1MC4a LINE L1 -2044 5764 5542 21 36 0 0 chr5 25362343 25362371 -177723161 + AT_rich Low_complexity Low_complexity 1 28 0 876 255 81 26 chr5 25362406 25362531 -177723001 + MER21B LTR ERV1 451 568 -295 405 0 0 0 chr5 25362531 25362576 -177722956 + (TG)n Simple_repeat Simple_repeat 2 46 0 876 255 81 26 chr5 25362576 25362721 -177722811 + MER21B LTR ERV1 568 736 -127 191 296 182 11 chr5 25363468 25363556 -177721976 - MIR3 SINE MIR -100 108 6 345 298 48 0 chr5 25364616 25364720 -177720812 + MIR SINE MIR 32 140 -122 424 318 47 6 chr5 25365150 25365320 -177720212 - MIR SINE MIR -66 196 20 643 304 22 0 chr5 25365953 25366137 -177719395 - MER5A DNA MER1_type -1 188 1 23 0 0 0 chr5 25366477 25366500 -177719032 + AT_rich Low_complexity Low_complexity 1 23 0 663 81 0 0 chr5 25366916 25367015 -177718517 + (TTC)n Simple_repeat Simple_repeat 2 100 0 22 0 0 0 chr5 25367048 25367070 -177718462 + AT_rich Low_complexity Low_complexity 1 22 0 509 221 125 2 chr5 25367881 25368156 -177717376 + L1MDa LINE L1 2449 2756 -3784 186 189 0 0 chr5 25368162 25368199 -177717333 + (TA)n Simple_repeat Simple_repeat 1 37 0 1149 254 61 20 chr5 25368284 25368744 -177716788 + L1MDa LINE L1 2774 3252 -3288 929 145 32 59 chr5 25368745 25368966 -177716566 + L1MD1 LINE L1 6028 6242 0 2035 106 3 61 chr5 25368975 25369286 -177716246 + AluSx SINE Alu 1 293 -19 311 289 22 0 chr5 25369324 25369414 -177716118 + L1M4 LINE L1 4390 4481 -1665 711 299 38 31 chr5 25369438 25369959 -177715573 + L1M4 LINE L1 4643 5167 -979 652 130 0 0 chr5 25370013 25370113 -177715419 - HY3 scRNA scRNA 0 101 2 248 256 0 13 chr5 25370200 25370252 -177715280 + (TA)n Simple_repeat Simple_repeat 2 54 -24 536 113 0 0 chr5 25370252 25370332 -177715200 + MADE1 DNA Mariner 1 80 0 248 256 0 13 chr5 25370332 25370357 -177715175 + (TA)n Simple_repeat Simple_repeat 54 78 0 1557 209 61 125 chr5 25370378 25370562 -177714970 - MER77 LTR ERV1 0 605 411 1421 246 28 14 chr5 25370562 25370919 -177714613 + MLT1A1 LTR MaLR 4 365 0 1557 209 61 125 chr5 25370919 25371356 -177714176 - MER77 LTR ERV1 -194 411 24 1151 234 19 19 chr5 25371372 25371633 -177713899 + MLT1A1 LTR MaLR 105 365 0 2493 130 3 8 chr5 25371930 25372307 -177713225 + THE1C LTR MaLR 1 375 0 268 397 21 7 chr5 25372805 25372946 -177712586 + HAL1 LINE L1 533 675 -1832 348 251 97 75 chr5 25373019 25373514 -177712018 + HAL1 LINE L1 810 1315 -1192 346 364 48 24 chr5 25373635 25373926 -177711606 + HAL1 LINE L1 1510 1807 -700 742 199 0 8 chr5 25374682 25374813 -177710719 - FLAM_C SINE Alu -13 130 1 191 111 0 28 chr5 25375159 25375195 -177710337 + (GAA)n Simple_repeat Simple_repeat 2 36 0 758 250 71 5 chr5 25376189 25376282 -177709250 + MER58A DNA MER1_type 1 86 -2334 357 24 0 0 chr5 25376282 25376324 -177709208 + (TA)n Simple_repeat Simple_repeat 1 42 0 * 405 0 0 0 chr5 25376323 25376368 -177709164 + (GA)n Simple_repeat Simple_repeat 2 46 0 758 250 71 5 chr5 25376324 25376470 -177709062 + MER58A DNA MER1_type 86 209 -15 22 0 0 0 chr5 25376676 25376698 -177708834 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 25376820 25376846 -177708686 + AT_rich Low_complexity Low_complexity 1 26 0 26 64 0 0 chr5 25377113 25377160 -177708372 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr5 25377192 25377222 -177708310 + AT_rich Low_complexity Low_complexity 1 30 0 1333 205 0 60 chr5 25378048 25378346 -177707186 - AluJo SINE Alu -30 282 3 183 139 0 0 chr5 25379410 25379446 -177706086 + (TC)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 25379675 25379696 -177705836 + AT_rich Low_complexity Low_complexity 1 21 0 192 107 0 0 chr5 25380613 25380641 -177704891 + L2 LINE L2 2215 2242 -1072 254 275 62 0 chr5 25380666 25380746 -177704786 + L2 LINE L2 2216 2300 -1014 602 229 0 16 chr5 25380895 25381017 -177704515 + MLT2C1 LTR ERVL 208 327 -70 6976 206 93 67 chr5 25381022 25383429 -177702103 + Tigger2 DNA MER2_type 1 2468 -250 2322 86 0 0 chr5 25383429 25383719 -177701813 + AluY SINE Alu 1 290 -21 1297 200 13 172 chr5 25383893 25383974 -177701558 + MER67C LTR ERV1 1 93 -551 577 153 95 0 chr5 25383974 25384111 -177701421 - L1MA9 LINE L1 0 6312 6163 1297 200 13 172 chr5 25384111 25384220 -177701312 + MER67C LTR ERV1 93 218 -426 2263 110 3 0 chr5 25384220 25384528 -177701004 - AluSx SINE Alu -3 309 1 1297 200 13 172 chr5 25384528 25384781 -177700751 + MER67C LTR ERV1 218 403 -241 281 138 52 17 chr5 25384808 25384866 -177700666 + MER67D LTR ERV1 455 514 0 505 313 82 5 chr5 25384867 25385075 -177700457 - MLT2F LTR ERVL -152 511 288 1242 156 9 17 chr5 25385131 25385362 -177700170 + MER4D LTR ERV1 1 229 -674 1392 159 30 81 chr5 25385664 25385998 -177699534 - MER44D DNA MER2_type 0 609 23 795 293 12 12 chr5 25387154 25387396 -177698136 + MLT1A1 LTR MaLR 113 354 -11 3041 174 64 33 chr5 25387400 25387512 -177698020 - ERVL LTR ERVL -990 4774 4667 1996 145 129 8 chr5 25387512 25387892 -177697640 - MSTA LTR MaLR -2 426 1 3041 174 64 33 chr5 25387892 25388390 -177697142 - ERVL LTR ERVL -1097 4667 4145 * 10405 220 29 16 chr5 25388387 25390318 -177695214 - ERVL LTR ERVL -1789 3975 2071 1586 165 132 26 chr5 25390318 25390705 -177694827 + MSTA LTR MaLR 1 428 0 7579 176 33 42 chr5 25390705 25391205 -177694327 + MSTA-int LTR MaLR 1 504 -1076 1680 131 29 0 chr5 25391205 25391450 -177694082 + AluSx SINE Alu 61 312 0 7579 176 33 42 chr5 25391450 25392371 -177693161 + MSTA-int LTR MaLR 504 1409 -171 180 0 0 0 chr5 25392371 25392391 -177693141 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 7579 176 33 42 chr5 25392391 25392562 -177692970 + MSTA-int LTR MaLR 1409 1580 0 1914 157 93 42 chr5 25392562 25392749 -177692783 + MSTA LTR MaLR 1 177 -251 2215 130 0 0 chr5 25392749 25393057 -177692475 + AluSx SINE Alu 1 308 -4 1914 157 93 42 chr5 25393057 25393276 -177692256 + MSTA LTR MaLR 177 428 0 10405 220 29 16 chr5 25393276 25395082 -177690450 - ERVL LTR ERVL -3692 2072 102 1438 176 0 4 chr5 25395088 25395344 -177690188 - L1PA15 LINE L1 -1 6164 5910 3928 204 34 18 chr5 25395444 25395939 -177689593 - L1PA15 LINE L1 -303 5863 5377 1870 165 38 22 chr5 25395939 25396308 -177689224 - THE1C LTR MaLR 0 375 1 3928 204 34 18 chr5 25396308 25397443 -177688089 - L1PA15 LINE L1 -789 5377 4207 200 114 45 0 chr5 25397494 25397538 -177687994 + (TTAA)n Simple_repeat Simple_repeat 2 47 0 9812 80 9 3 chr5 25397619 25399748 -177685784 - L1PA7 LINE L1 -3 6151 4011 27 29 0 0 chr5 25400307 25400341 -177685191 + AT_rich Low_complexity Low_complexity 1 34 0 238 220 0 0 chr5 25400738 25400788 -177684744 + (TA)n Simple_repeat Simple_repeat 1 50 0 1155 240 42 0 chr5 25403107 25403415 -177682117 + L1MC3 LINE L1 7342 7662 -123 710 210 41 82 chr5 25403517 25403589 -177681943 - MER6B DNA MER2_type -655 210 137 1191 214 62 22 chr5 25403589 25403864 -177681668 + AluJb SINE Alu 1 286 -16 237 65 0 0 chr5 25403864 25403895 -177681637 + (CATA)n Simple_repeat Simple_repeat 2 32 0 710 210 41 82 chr5 25403895 25404040 -177681492 - MER6B DNA MER2_type -726 139 1 2047 181 14 3 chr5 25404723 25405094 -177680438 - Tigger1 DNA MER2_type -2043 375 1 1198 273 99 44 chr5 25405094 25405548 -177679984 - MLT1F LTR MaLR -63 479 1 2229 281 97 43 chr5 25407520 25410131 -177675401 + L1ME1 LINE L1 3025 5779 -385 673 315 103 7 chr5 25410151 25410576 -177674956 + L1ME2 LINE L1 5689 6154 -10 21 57 0 0 chr5 25410900 25410935 -177674597 + AT_rich Low_complexity Low_complexity 1 35 0 316 273 137 39 chr5 25411189 25411445 -177674087 - L1ME LINE L1 -3132 2948 2668 383 309 73 55 chr5 25411556 25411993 -177673539 - L1ME LINE L1 -3568 2512 2068 1581 220 20 37 chr5 25412465 25412505 -177673027 - MLT2B3 LTR ERVL 0 554 515 594 93 0 0 chr5 25412505 25412591 -177672941 + (TAGA)n Simple_repeat Simple_repeat 2 87 0 1581 220 20 37 chr5 25412591 25413161 -177672371 - MLT2B3 LTR ERVL -39 515 3 208 135 0 0 chr5 25417314 25417351 -177668181 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1629 211 30 19 chr5 25417597 25417958 -177667574 + MLT1A1 LTR MaLR 1 365 0 240 229 16 0 chr5 25418084 25418145 -177667387 + L1ME1 LINE L1 6097 6158 -8 671 276 36 14 chr5 25418172 25418393 -177667139 + L1ME1 LINE L1 5936 6161 -5 452 228 12 84 chr5 25419299 25419462 -177666070 - MLT2F LTR ERVL -4 659 509 444 193 0 23 chr5 25419462 25419543 -177665989 + MER67D LTR ERV1 1 81 -433 659 131 95 0 chr5 25419543 25419680 -177665852 - L1MA9 LINE L1 0 6312 6163 889 213 48 30 chr5 25419704 25419788 -177665744 + MER67C LTR ERV1 64 145 -565 1994 142 3 0 chr5 25419788 25420097 -177665435 - AluSx SINE Alu -2 310 1 889 213 48 30 chr5 25420097 25420242 -177665290 + MER67C LTR ERV1 145 297 -413 3114 181 34 26 chr5 25420350 25420976 -177664556 + ERVL-B3 LTR ERVL 4830 5460 -304 1881 156 24 0 chr5 25420975 25421308 -177664224 + ERVL-B3 LTR ERVL 5417 5757 -7 * 2416 204 43 43 chr5 25421308 25421862 -177663670 + MLT2B3 LTR ERVL 1 554 0 334 259 29 72 chr5 25421865 25422004 -177663528 - L1ME LINE L1 -5445 625 493 502 308 99 58 chr5 25422078 25422494 -177663038 - L1ME LINE L1 -5611 459 27 348 354 59 29 chr5 25422995 25423298 -177662234 - L2 LINE L2 -214 3058 2747 432 314 91 29 chr5 25424571 25424813 -177660719 - MLT1J2 LTR MaLR -2 448 192 2053 125 0 6 chr5 25426538 25426849 -177658683 - AluSc SINE Alu 0 309 1 601 284 16 36 chr5 25426964 25427158 -177658374 + MIR SINE MIR 47 236 -26 21 57 0 0 chr5 25427810 25427845 -177657687 + AT_rich Low_complexity Low_complexity 1 35 0 340 296 126 36 chr5 25428024 25428636 -177656896 + HAL1 LINE L1 796 1462 -1045 2328 70 0 3 chr5 25428732 25429030 -177656502 - AluY SINE Alu -14 297 1 422 238 122 34 chr5 25429824 25429971 -177655561 - MLT1H1 LTR MaLR 0 555 396 2398 67 0 0 chr5 25430057 25430354 -177655178 + AluY SINE Alu 8 304 -7 189 233 27 110 chr5 25430359 25430432 -177655100 - L3b LINE CR1 -235 1348 1282 880 300 65 56 chr5 25431002 25431862 -177653670 + HAL1 LINE L1 1502 2369 -138 271 0 51 0 chr5 25432387 25432426 -177653106 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 490 204 18 9 chr5 25432426 25432539 -177652993 - L1MA9 LINE L1 -37 6275 6162 1044 242 85 24 chr5 25432573 25432866 -177652666 + MER58B DNA MER1_type 5 315 -26 324 0 0 0 chr5 25432867 25432903 -177652629 + (CA)n Simple_repeat Simple_repeat 1 36 0 273 57 0 0 chr5 25434110 25434145 -177651387 + (CA)n Simple_repeat Simple_repeat 2 36 0 270 152 0 0 chr5 25434153 25434199 -177651333 - L2 LINE L2 -1 3312 3267 1818 149 86 6 chr5 25434550 25434886 -177650646 + MER47A DNA MER2_type 2 364 -2 3792 165 27 14 chr5 25435383 25436121 -177649411 - L1PA16 LINE L1 0 6166 5419 2348 252 29 38 chr5 25436131 25437031 -177648501 + L1P LINE L1 2267 3158 -2988 2033 193 94 33 chr5 25437155 25437759 -177647773 - L1M LINE L1 -839 5307 4678 10268 209 50 11 chr5 25437760 25438874 -177646658 - L1PA15-16 LINE L1 -2294 4555 3486 2228 103 7 0 chr5 25438874 25439184 -177646348 - AluSp SINE Alu -1 312 1 10268 209 50 11 chr5 25439184 25441017 -177644515 - L1PA15-16 LINE L1 -3363 3486 3 228 216 0 0 chr5 25441061 25441112 -177644420 + (TATG)n Simple_repeat Simple_repeat 2 52 0 277 287 27 76 chr5 25441631 25441854 -177643678 - HAL1b LINE L1 -820 528 317 6679 76 23 0 chr5 25442810 25443863 -177641669 - L1PA7 LINE L1 0 6154 5093 11392 109 13 0 chr5 25443863 25445539 -177639993 + L1PA7 LINE L1 3393 5090 -1056 316 211 64 11 chr5 25445703 25445810 -177639722 - L1MA7 LINE L1 -109 6203 5982 434 110 0 66 chr5 25445819 25445910 -177639622 + L1MA7 LINE L1 6207 6291 0 182 45 91 0 chr5 25446467 25446511 -177639021 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1327 35 0 41 chr5 25446513 25446684 -177638848 - L1PA3 LINE L1 -3 6152 5989 1558 269 20 18 chr5 25447264 25447766 -177637766 + MLT1D LTR MaLR 3 505 0 1370 128 214 12 chr5 25448443 25448700 -177636832 - AluSg1 SINE Alu 0 309 1 1563 229 6 3 chr5 25448779 25449102 -177636430 - MER89-int LTR ERV1 -1034 5767 5444 718 187 15 0 chr5 25449386 25449520 -177636012 - AluSx SINE Alu 0 312 177 525 268 0 0 chr5 25449520 25449643 -177635889 - AluSx SINE Alu -190 123 1 1563 211 14 16 chr5 25450927 25451347 -177634185 + MLT2B1 LTR ERVL 1 467 -48 633 11 23 11 chr5 25451378 25451465 -177634067 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 330 131 0 33 chr5 25451469 25451530 -177634002 + MLT2B1 LTR ERVL 462 520 0 1657 165 67 20 chr5 25451781 25452186 -177633346 - Charlie1a DNA MER1_type -6 1449 1026 1700 196 24 6 chr5 25452451 25452788 -177632744 - MER61A LTR ERV1 0 343 1 3500 233 28 37 chr5 25452949 25454002 -177631530 - Charlie1a DNA MER1_type -412 1043 1 243 146 0 0 chr5 25454148 25454189 -177631343 + (TAG)n Simple_repeat Simple_repeat 1 41 0 239 324 12 81 chr5 25454309 25454482 -177631050 + LTR67 LTR ERVL 39 199 -358 1950 177 65 76 chr5 25454961 25455487 -177630045 - MLT2B1 LTR ERVL 0 520 1 2489 199 20 18 chr5 25459544 25460037 -177625495 + MER82 DNA MER2_type 1 494 -159 820 271 21 25 chr5 25460175 25460415 -177625117 - MER8 DNA MER2_type 0 239 1 1857 159 52 0 chr5 25460460 25460769 -177624763 + MER7A DNA MER2_type 21 343 -3 934 197 44 19 chr5 25460780 25461034 -177624498 + L1MC4 LINE L1 6774 7021 -787 473 268 127 29 chr5 25461022 25461360 -177624172 + L1MC4 LINE L1 7250 7580 -228 * 990 265 82 16 chr5 25461360 25461726 -177623806 - MLT1B LTR MaLR 0 390 1 473 268 127 29 chr5 25461726 25461875 -177623657 + L1MC4 LINE L1 7580 7713 -95 195 100 0 0 chr5 25461925 25461955 -177623577 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 542 270 212 17 chr5 25461955 25462300 -177623232 + L1MC4 LINE L1 7488 7899 -143 38 81 0 0 chr5 25462357 25462444 -177623088 + AT_rich Low_complexity Low_complexity 1 87 0 332 358 56 39 chr5 25462586 25462818 -177622714 + L1ME LINE L1 5385 5620 -501 3199 161 17 9 chr5 25463078 25463700 -177621832 + MER4D LTR ERV1 266 872 0 432 0 0 0 chr5 25464174 25464222 -177621310 + (TA)n Simple_repeat Simple_repeat 2 49 0 2177 110 0 3 chr5 25464320 25464621 -177620911 - AluSg SINE Alu -10 300 1 1249 166 3 90 chr5 25464701 25464991 -177620541 + L1MA10 LINE L1 6027 6291 -43 550 352 82 40 chr5 25465297 25465894 -177619638 + MLT2F LTR ERVL 8 629 -34 355 271 60 108 chr5 25465994 25466393 -177619139 - L1MEd LINE L1 -4900 1219 840 24 0 0 0 chr5 25466562 25466586 -177618946 + AT_rich Low_complexity Low_complexity 1 24 0 1999 121 3 17 chr5 25466869 25467167 -177618365 - AluSq SINE Alu -19 294 1 370 242 44 11 chr5 25467475 25467566 -177617966 - MER58C DNA MER1_type -3 212 119 23 0 0 0 chr5 25468386 25468409 -177617123 + AT_rich Low_complexity Low_complexity 1 23 0 258 320 30 44 chr5 25468673 25468876 -177616656 + L1ME LINE L1 5536 5735 -386 1830 137 3 44 chr5 25469386 25469707 -177615825 - AluSx SINE Alu -4 308 1 23 33 0 0 chr5 25469885 25469915 -177615617 + AT_rich Low_complexity Low_complexity 1 30 0 1788 115 0 4 chr5 25470314 25470566 -177614966 + AluSq SINE Alu 3 253 -60 312 260 10 0 chr5 25470666 25470762 -177614770 + (TA)n Simple_repeat Simple_repeat 1 97 0 216 0 0 0 chr5 25470778 25470802 -177614730 + (CA)n Simple_repeat Simple_repeat 2 25 0 387 0 0 0 chr5 25470831 25470874 -177614658 + (CA)n Simple_repeat Simple_repeat 2 44 0 202 171 0 49 chr5 25472061 25472102 -177613430 + polypyrimidine Low_complexity Low_complexity 1 39 0 6177 235 45 40 chr5 25472333 25473884 -177611648 - MER89-int LTR ERV1 -270 6531 4970 2747 123 34 5 chr5 25473884 25474299 -177611233 - MSTA LTR MaLR -1 427 1 6177 235 45 40 chr5 25474299 25474379 -177611153 - MER89-int LTR ERV1 -1831 4970 4892 640 306 118 8 chr5 25474440 25474695 -177610837 - MER89-int LTR ERV1 -3866 2935 2653 * 956 244 41 69 chr5 25474667 25475057 -177610475 - MER89-int LTR ERV1 -5546 1255 877 585 242 35 135 chr5 25475273 25475533 -177609999 - MER89-int LTR ERV1 -6088 713 480 2118 216 80 11 chr5 25475533 25475997 -177609535 + MLT1D LTR MaLR 1 496 -9 934 209 52 0 chr5 25476110 25476301 -177609231 - ERVL LTR ERVL -1920 3844 3644 1547 209 23 13 chr5 25476309 25476616 -177608916 - MLT2B3 LTR ERVL -232 322 13 430 272 68 19 chr5 25476631 25476896 -177608636 + L1ME2 LINE L1 1086 1363 -5167 1442 252 26 44 chr5 25476913 25477341 -177608191 + MLT1D LTR MaLR 22 441 -64 271 162 0 29 chr5 25477486 25477554 -177607978 + GA-rich Low_complexity Low_complexity 5 70 0 628 271 60 21 chr5 25477655 25477745 -177607787 + L1ME2 LINE L1 1771 1856 -4684 450 49 0 0 chr5 25477745 25477806 -177607726 + (CA)n Simple_repeat Simple_repeat 2 62 0 628 271 60 21 chr5 25477806 25477999 -177607533 + L1ME2 LINE L1 1856 2065 -4475 22 35 0 0 chr5 25478269 25478298 -177607234 + AT_rich Low_complexity Low_complexity 1 29 0 3425 268 85 50 chr5 25478298 25481128 -177604404 + L1ME2 LINE L1 2535 5464 -1076 739 258 67 48 chr5 25481138 25481406 -177604126 + L1ME2 LINE L1 6286 6558 0 21 0 0 0 chr5 25481627 25481648 -177603884 + AT_rich Low_complexity Low_complexity 1 21 0 247 333 79 0 chr5 25481711 25481825 -177603707 - MIR SINE MIR -1 261 139 1818 160 3 3 chr5 25482107 25482401 -177603131 + AluSx SINE Alu 1 294 -18 482 101 0 13 chr5 25482637 25482716 -177602816 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 1784 156 10 3 chr5 25482828 25483167 -177602365 + AluSx SINE Alu 1 312 0 445 341 109 57 chr5 25484022 25484769 -177600763 - L2 LINE L2 -9 3304 2517 223 186 0 0 chr5 25484901 25484944 -177600588 + A-rich Low_complexity Low_complexity 1 43 0 246 340 50 46 chr5 25485274 25485515 -177600017 + L3 LINE CR1 1136 1377 -200 299 316 26 9 chr5 25485694 25485808 -177599724 + MER94 DNA DNA 18 133 -1 21 36 0 0 chr5 25486358 25486386 -177599146 + AT_rich Low_complexity Low_complexity 1 28 0 32 57 0 0 chr5 25486563 25486616 -177598916 + AT_rich Low_complexity Low_complexity 1 53 0 1073 292 109 81 chr5 25486761 25487621 -177597911 - L2 LINE L2 -5 3308 2429 213 39 0 0 chr5 25487661 25487687 -177597845 + (CAAAAA)n Simple_repeat Simple_repeat 1 26 0 255 31 0 0 chr5 25487740 25487772 -177597760 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2160 44 11 4 chr5 25487789 25488062 -177597470 - L1PA3 LINE L1 -11 6144 5870 315 269 21 0 chr5 25488088 25488181 -177597351 + MER5A DNA MER1_type 16 110 -79 24 0 0 0 chr5 25488470 25488494 -177597038 + AT_rich Low_complexity Low_complexity 1 24 0 206 153 42 42 chr5 25490996 25491068 -177594464 + (TTATA)n Simple_repeat Simple_repeat 3 74 0 301 70 35 0 chr5 25491236 25491293 -177594239 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 189 325 44 62 chr5 25491657 25491817 -177593715 + L2 LINE L2 3005 3161 -152 182 323 199 0 chr5 25492430 25492591 -177592941 + L2 LINE L2 2062 2254 -1060 22 0 0 0 chr5 25492970 25492992 -177592540 + AT_rich Low_complexity Low_complexity 1 22 0 292 268 89 16 chr5 25493091 25493214 -177592318 - LTR67 LTR ERVL -2 555 424 25 31 0 0 chr5 25494072 25494104 -177591428 + AT_rich Low_complexity Low_complexity 1 32 0 1849 230 75 19 chr5 25494339 25494817 -177590715 + MLT1D LTR MaLR 1 505 0 262 227 13 0 chr5 25497395 25497470 -177588062 - MER116 DNA Mariner 0 80 5 225 247 41 52 chr5 25497655 25497752 -177587780 - MLT1I LTR MaLR -194 215 120 210 143 0 0 chr5 25497828 25497863 -177587669 + (CA)n Simple_repeat Simple_repeat 2 36 0 408 229 28 69 chr5 25498321 25498465 -177587067 + MIR SINE MIR 122 259 -3 223 333 105 0 chr5 25498562 25498676 -177586856 - MIR SINE MIR -63 199 74 21 36 0 0 chr5 25499328 25499356 -177586176 + AT_rich Low_complexity Low_complexity 1 28 0 3391 34 2 0 chr5 25499399 25499809 -177585723 + L1PA4 LINE L1 5745 6155 0 345 364 84 34 chr5 25499828 25500125 -177585407 + L3 LINE CR1 170 481 -1096 283 277 51 18 chr5 25500971 25501141 -177584391 - L1MEd LINE L1 -862 1628 1354 414 291 32 67 chr5 25501180 25501493 -177584039 - L1MEd LINE L1 -4953 1166 865 418 337 72 67 chr5 25501517 25501993 -177583539 - L1MEd LINE L1 -5321 798 315 2095 92 3 0 chr5 25501993 25502336 -177583196 - AluSp SINE Alu 0 344 1 418 337 72 67 chr5 25502336 25502617 -177582915 - L1MEd LINE L1 -5804 315 37 262 331 40 33 chr5 25502667 25502818 -177582714 + L3 LINE CR1 610 761 -816 410 354 115 10 chr5 25502949 25503263 -177582269 + L3 LINE CR1 1230 1576 -1 28 0 0 0 chr5 25503554 25503582 -177581950 + AT_rich Low_complexity Low_complexity 1 28 0 374 290 55 59 chr5 25504641 25504896 -177580636 + L2 LINE L2 1821 2074 -1240 215 261 14 43 chr5 25505006 25505075 -177580457 + L2 LINE L2 2544 2610 -704 1667 247 7 51 chr5 25505075 25505525 -177580007 + MLT2B1 LTR ERVL 1 430 -90 1568 156 31 89 chr5 25505514 25505872 -177579660 - MER2 DNA MER2_type -8 337 1 * 317 115 0 0 chr5 25505872 25505929 -177579603 + MLT2C1 LTR ERVL 349 414 0 1377 148 63 11 chr5 25506582 25506866 -177578666 + L1MA8 LINE L1 5973 6271 -20 23 78 0 0 chr5 25506866 25506917 -177578615 + AT_rich Low_complexity Low_complexity 1 51 0 2047 243 20 45 chr5 25506917 25507515 -177578017 + MER92B LTR ERV1 54 636 0 27 62 0 0 chr5 25507826 25507874 -177577658 + AT_rich Low_complexity Low_complexity 1 48 0 25 0 0 0 chr5 25508489 25508514 -177577018 + AT_rich Low_complexity Low_complexity 1 25 0 316 307 37 16 chr5 25508848 25508998 -177576534 + MIR SINE MIR 36 187 -65 1017 217 175 29 chr5 25509632 25509946 -177575586 - MLT1A2 LTR MaLR -11 363 4 1614 239 115 72 chr5 25510508 25511203 -177574329 + MER50 LTR ERV1 10 734 0 247 294 8 8 chr5 25511278 25511404 -177574128 + (TA)n Simple_repeat Simple_repeat 2 127 0 21 0 0 0 chr5 25511410 25511431 -177574101 + AT_rich Low_complexity Low_complexity 1 21 0 2056 133 0 3 chr5 25511767 25512068 -177573464 + AluSg SINE Alu 1 300 -10 26696 76 9 7 chr5 25512168 25515895 -177569637 - L1P LINE L1 -804 5342 1607 26 30 0 0 chr5 25516432 25516465 -177569067 + AT_rich Low_complexity Low_complexity 1 33 0 37 39 0 0 chr5 25516897 25516948 -177568584 + AT_rich Low_complexity Low_complexity 1 51 0 30 27 0 0 chr5 25517043 25517080 -177568452 + AT_rich Low_complexity Low_complexity 1 37 0 1226 321 106 12 chr5 25517819 25518443 -177567089 + L2 LINE L2 2403 2966 -347 1224 198 54 124 chr5 25518443 25518832 -177566700 - MLT1D LTR MaLR 0 505 90 183 42 0 0 chr5 25518832 25518856 -177566676 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1224 198 54 124 chr5 25518856 25518895 -177566637 - MLT1D LTR MaLR -415 90 50 2262 103 0 3 chr5 25518895 25519206 -177566326 - AluSg SINE Alu 0 310 1 1224 198 54 124 chr5 25519206 25519316 -177566216 - MLT1D LTR MaLR -455 50 4 1226 321 106 12 chr5 25519316 25519522 -177566010 + L2 LINE L2 2966 3313 0 22 0 0 0 chr5 25519745 25519767 -177565765 + AT_rich Low_complexity Low_complexity 1 22 0 722 181 0 8 chr5 25519820 25519947 -177565585 + FLAM_C SINE Alu 1 126 -7 244 249 122 19 chr5 25522235 25522397 -177563135 - L1ME LINE L1 -248 5873 5681 193 338 97 72 chr5 25522973 25523898 -177561634 + L2 LINE L2 1729 2676 -638 217 250 0 0 chr5 25524017 25524069 -177561463 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 195 226 38 19 chr5 25524325 25524378 -177561154 - L2 LINE L2 -340 2974 2921 2284 60 0 23 chr5 25524768 25525068 -177560464 - AluY SINE Alu -18 293 1 181 268 0 0 chr5 25525292 25525333 -177560199 + L2 LINE L2 3193 3233 -39 410 307 159 0 chr5 25525472 25525661 -177559871 - L3 LINE CR1 -53 1524 1306 1165 340 176 12 chr5 25525811 25526627 -177558905 + L2 LINE L2 531 1480 -1834 187 156 16 125 chr5 25526629 25526693 -177558839 + L2 LINE L2 2404 2460 -854 832 201 179 45 chr5 25526732 25527041 -177558491 + MER83C LTR ERV1 1 327 -46 21 36 0 0 chr5 25527701 25527729 -177557803 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 25529395 25529416 -177556116 + AT_rich Low_complexity Low_complexity 1 21 0 1248 63 6 0 chr5 25530477 25530672 -177554860 + AluY SINE Alu 134 329 0 21 71 0 0 chr5 25530675 25530717 -177554815 + AT_rich Low_complexity Low_complexity 1 42 0 4052 208 62 20 chr5 25531574 25533086 -177552446 + L1MB2 LINE L1 4589 6171 0 1933 176 77 15 chr5 25533120 25533324 -177552208 - MSTA LTR MaLR 0 428 238 258 32 0 0 chr5 25533324 25533355 -177552177 + (GA)n Simple_repeat Simple_repeat 2 32 0 1933 176 77 15 chr5 25533355 25533553 -177551979 - MSTA LTR MaLR -190 238 1 24 53 0 0 chr5 25534098 25534136 -177551396 + AT_rich Low_complexity Low_complexity 1 38 0 537 314 35 9 chr5 25535139 25535368 -177550164 - L1ME1 LINE L1 -4 6162 5928 2138 108 7 3 chr5 25535619 25535915 -177549617 + AluSx SINE Alu 1 297 -15 785 272 75 0 chr5 25536450 25536729 -177548803 - L1ME3A LINE L1 -12 6158 5859 266 186 0 0 chr5 25536787 25536830 -177548702 - HERVK3 LTR ERVK -7200 43 1 2042 170 66 24 chr5 25536830 25537241 -177548291 - LTR3 LTR ERVK 0 432 5 310 243 19 65 chr5 25537252 25537359 -177548173 - L1ME3A LINE L1 -504 5666 5565 594 171 0 43 chr5 25538185 25538302 -177547230 - AluJb SINE Alu -23 289 178 180 0 0 0 chr5 25538372 25538392 -177547140 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 238 397 17 9 chr5 25539315 25539431 -177546101 + MIR3 SINE MIR 91 207 -1 25 51 0 0 chr5 25540519 25540558 -177544974 + AT_rich Low_complexity Low_complexity 1 39 0 405 335 21 21 chr5 25541317 25541508 -177544024 + L2 LINE L2 3119 3309 -4 618 281 23 0 chr5 25541789 25541960 -177543572 - MER45A DNA AcHobo -3 175 1 233 228 0 18 chr5 25542018 25542075 -177543457 + CT-rich Low_complexity Low_complexity 3 58 0 242 333 105 35 chr5 25542690 25542861 -177542671 - MER5A DNA MER1_type 0 189 7 2556 87 29 3 chr5 25544018 25544396 -177541136 + L1PA13 LINE L1 5771 6158 -5 742 277 128 34 chr5 25544794 25545115 -177540417 + LTR40a LTR ERVL 169 519 0 23 0 0 0 chr5 25545213 25545236 -177540296 + AT_rich Low_complexity Low_complexity 1 23 0 2546 171 96 22 chr5 25545749 25546304 -177539228 - LTR48 LTR ERV1 0 787 192 257 154 0 0 chr5 25546304 25546343 -177539189 - HERVK3 LTR ERVK -7204 39 1 715 200 0 35 chr5 25546349 25546519 -177539013 - LTR3 LTR ERVK -2 430 267 9217 142 18 37 chr5 25546525 25548152 -177537380 + L1P LINE L1 11 1607 -4539 723 199 0 0 chr5 25549665 25549796 -177535736 - FLAM_C SINE Alu -12 131 1 369 388 135 16 chr5 25550006 25550318 -177535214 + L1MEc LINE L1 22 370 -6026 1529 80 9 0 chr5 25550809 25551021 -177534511 - L1PA7 LINE L1 -1 6153 5940 5207 54 15 4 chr5 25551022 25551827 -177533705 + L1PA7 LINE L1 5119 5926 -228 512 292 63 22 chr5 25551846 25552213 -177533319 + L1MEc LINE L1 839 1220 -4985 328 238 173 42 chr5 25552529 25552697 -177532835 + L1MEc LINE L1 1368 1557 -4660 837 303 67 24 chr5 25552706 25552770 -177532762 + L1MEc LINE L1 3158 3218 -2997 1784 166 3 27 chr5 25552770 25553071 -177532461 + AluJb SINE Alu 1 294 -18 180 0 0 0 chr5 25553072 25553092 -177532440 + (AAATG)n Simple_repeat Simple_repeat 1 20 0 837 303 67 24 chr5 25553092 25553606 -177531926 + L1MEc LINE L1 3217 3763 -2452 1632 164 0 10 chr5 25554023 25554333 -177531199 + L1MA7 LINE L1 5985 6291 0 21 0 0 0 chr5 25554581 25554602 -177530930 + AT_rich Low_complexity Low_complexity 1 21 0 1722 132 6 89 chr5 25554942 25555267 -177530265 + AluSx SINE Alu 1 298 -14 23 78 0 0 chr5 25555362 25555413 -177530119 + AT_rich Low_complexity Low_complexity 1 51 0 2114 105 25 0 chr5 25555751 25556037 -177529495 + AluSx SINE Alu 9 301 -11 25 0 0 0 chr5 25556063 25556088 -177529444 + AT_rich Low_complexity Low_complexity 1 25 0 222 222 22 0 chr5 25556940 25556985 -177528547 + L2 LINE L2 3215 3260 -12 23 0 0 0 chr5 25557087 25557110 -177528422 + AT_rich Low_complexity Low_complexity 1 23 0 2296 88 0 32 chr5 25557116 25557424 -177528108 + AluSg1 SINE Alu 4 301 -8 330 343 29 41 chr5 25557521 25557763 -177527769 + HAL1b LINE L1 446 684 -664 21 71 0 0 chr5 25557858 25557900 -177527632 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr5 25559167 25559198 -177526334 + AT_rich Low_complexity Low_complexity 1 31 0 186 133 0 0 chr5 25560144 25560174 -177525358 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 23 0 0 0 chr5 25560711 25560734 -177524798 + AT_rich Low_complexity Low_complexity 1 23 0 1873 133 22 4 chr5 25561058 25561388 -177524144 - AluSq SINE Alu 0 335 1 1398 198 88 18 chr5 25561502 25561845 -177523687 + MLT1A2 LTR MaLR 1 367 -7 957 231 69 26 chr5 25561992 25562338 -177523194 - MLT1A1 LTR MaLR -4 361 1 23 68 0 0 chr5 25562668 25562712 -177522820 + AT_rich Low_complexity Low_complexity 1 44 0 186 133 0 0 chr5 25564153 25564183 -177521349 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 24 53 0 0 chr5 25564815 25564853 -177520679 + AT_rich Low_complexity Low_complexity 1 38 0 234 118 0 118 chr5 25564995 25565046 -177520486 + MER47A DNA MER2_type 81 125 -241 1444 159 12 52 chr5 25565052 25565240 -177520292 - L1MA5 LINE L1 -2 6298 6127 1900 163 0 0 chr5 25565240 25565535 -177519997 - AluSx SINE Alu -17 295 1 1444 159 12 52 chr5 25565535 25565673 -177519859 - L1MA5 LINE L1 -173 6127 5985 1699 127 0 4 chr5 25565673 25565910 -177519622 - AluSx SINE Alu -76 236 1 1704 135 52 1 chr5 25565911 25566287 -177519245 - L1MA5 LINE L1 -719 5581 5189 1440 181 4 8 chr5 25566287 25566553 -177518979 + MER47A DNA MER2_type 102 366 0 2002 135 7 0 chr5 25566740 25567022 -177518510 + AluSc SINE Alu 1 284 -25 5035 44 24 2 chr5 25569479 25570110 -177515422 + L1PA4 LINE L1 5511 6155 0 11648 164 99 5 chr5 25570532 25571006 -177514526 + L1MA2 LINE L1 1167 1595 -5970 183 42 0 0 chr5 25571006 25571030 -177514502 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 11648 164 99 5 chr5 25571030 25572881 -177512651 + L1MA2 LINE L1 1595 3711 -3854 6221 192 19 16 chr5 25572874 25575249 -177510283 + L1MA2 LINE L1 5344 7723 0 * 25 31 0 0 chr5 25575367 25575399 -177510133 + AT_rich Low_complexity Low_complexity 1 32 0 12025 165 81 15 chr5 25576428 25577695 -177507837 - Tigger1 DNA MER2_type 0 2418 1236 2402 132 65 7 chr5 25577695 25578098 -177507434 + MSTA LTR MaLR 3 428 0 12025 165 81 15 chr5 25578098 25579097 -177506435 - Tigger1 DNA MER2_type -1182 1236 2 417 354 0 0 chr5 25579112 25579239 -177506293 + L2 LINE L2 3187 3313 0 348 176 0 0 chr5 25579614 25579682 -177505850 + CT-rich Low_complexity Low_complexity 3 70 0 283 359 28 37 chr5 25579696 25579913 -177505619 - MLT1K LTR MaLR -180 408 194 411 390 10 5 chr5 25580042 25580247 -177505285 + L2 LINE L2 2857 3062 -210 837 206 6 0 chr5 25580371 25580551 -177504981 + L1 LINE L1 5167 5347 -799 298 270 14 0 chr5 25580751 25580825 -177504707 - MER58 DNA MER1_type -13 2407 128 31 68 0 0 chr5 25581782 25581841 -177503691 + AT_rich Low_complexity Low_complexity 1 59 0 367 259 145 23 chr5 25581843 25581974 -177503558 - MIR3 SINE MIR -45 163 17 596 233 90 0 chr5 25582075 25582208 -177503324 - FRAM SINE Alu -31 145 1 5491 219 9 8 chr5 25582268 25584001 -177501531 - L1MA2 LINE L1 -1 7722 5983 1664 170 181 6 chr5 25584001 25584365 -177501167 + MSTA LTR MaLR 1 428 0 5491 219 9 8 chr5 25584365 25584600 -177500932 - L1MA2 LINE L1 -1740 5983 5750 6494 173 106 66 chr5 25584601 25586200 -177499332 + MER52A LTR ERV1 1 1753 -2 5107 189 14 13 chr5 25586203 25587248 -177498284 - L1MA2 LINE L1 -1814 5751 4706 2282 206 9 10 chr5 25587254 25587828 -177497704 - L1MA2 LINE L1 -3457 4108 3534 556 254 56 106 chr5 25587828 25588202 -177497330 - MLT1E3 LTR MaLR -139 487 136 872 274 53 51 chr5 25588204 25588638 -177496894 - MLT2B1 LTR ERVL 0 520 86 249 244 63 55 chr5 25588621 25588748 -177496784 - MLT1K LTR MaLR -428 226 99 * 520 174 0 0 chr5 25588913 25589005 -177496527 - MSTA LTR MaLR 0 428 337 584 234 0 0 chr5 25589012 25589123 -177496409 - MSTA LTR MaLR -317 111 1 274 108 31 31 chr5 25589123 25589188 -177496344 + (CATAT)n Simple_repeat Simple_repeat 3 67 0 2625 164 36 7 chr5 25589188 25589634 -177495898 - MSTA-int LTR MaLR 0 1651 1193 1221 149 5 0 chr5 25589634 25589828 -177495704 - MSTA-int LTR MaLR -568 1012 818 687 119 0 0 chr5 25589827 25589928 -177495604 - MSTA-int LTR MaLR -1357 223 123 * 617 158 0 0 chr5 25589933 25590028 -177495504 - THE1C LTR MaLR -280 95 1 307 192 26 0 chr5 25590124 25590202 -177495330 - L1PB4 LINE L1 -3 6153 6074 1601 200 45 79 chr5 25590305 25590774 -177494758 - MLT1C LTR MaLR -10 457 5 542 347 28 14 chr5 25590859 25591075 -177494457 + MIR SINE MIR 44 262 0 197 381 9 0 chr5 25591341 25591446 -177494086 + L2 LINE L2 2112 2217 -1097 485 286 179 30 chr5 25591482 25591744 -177493788 + L1PB4 LINE L1 150 450 -6399 333 394 89 25 chr5 25591759 25591962 -177493570 + L1PB4 LINE L1 572 787 -6062 356 387 84 31 chr5 25592267 25592458 -177493074 + L1PB4 LINE L1 587 787 -6062 7633 238 61 17 chr5 25592892 25594077 -177491455 + L1PB4 LINE L1 1082 2214 -4634 2202 103 10 0 chr5 25594077 25594378 -177491154 + AluY SINE Alu 1 304 -7 7633 238 61 17 chr5 25594378 25597171 -177488361 + L1PB4 LINE L1 2214 5235 -1613 240 98 39 39 chr5 25597173 25597224 -177488308 + FAM SINE Alu 123 173 -6 387 59 294 15 chr5 25597259 25597299 -177488233 - MLT2A1 LTR ERVL 0 444 416 733 11 21 0 chr5 25597299 25597393 -177488139 + (TA)n Simple_repeat Simple_repeat 2 97 0 387 59 294 15 chr5 25597393 25597420 -177488112 - MLT2A1 LTR ERVL -28 416 358 2882 92 0 0 chr5 25597466 25597846 -177487686 - MLT2A1 LTR ERVL -64 380 1 3419 189 36 55 chr5 25597846 25599454 -177486078 + L1PB4 LINE L1 5263 6838 -20 22 0 0 0 chr5 25599454 25599476 -177486056 + AT_rich Low_complexity Low_complexity 1 22 0 6274 80 10 5 chr5 25599476 25600990 -177484542 - L1PA7 LINE L1 -5 6149 4624 15564 107 11 7 chr5 25600990 25603891 -177481641 + L1P LINE L1 1320 4238 -1908 4171 91 39 5 chr5 25603895 25604480 -177481052 + LTR14B LTR ERVK 4 608 0 5555 66 3 0 chr5 25604480 25605177 -177480355 + HERVK14 LTR ERVK 1 699 -5246 2973 127 51 2 chr5 25605212 25605661 -177479871 + HERVK14 LTR ERVK 1706 2176 -3769 180 246 0 0 chr5 25606386 25606455 -177479077 + GA-rich Low_complexity Low_complexity 2 70 0 250 62 0 0 chr5 25606463 25606495 -177479037 + HERVK3 LTR ERVK 187 218 -7025 949 83 0 0 chr5 25606647 25606768 -177478764 + HERVK3 LTR ERVK 4280 4400 -1545 * 3406 68 23 1 chr5 25606767 25607430 -177478102 + HERVK3 LTR ERVK 5013 5759 -186 318 222 0 18 chr5 25607430 25607505 -177478027 + MER41C LTR ERV1 1 61 -493 774 37 56 28 chr5 25607505 25607613 -177477919 + HERVK14 LTR ERVK 5835 5945 0 3939 98 43 5 chr5 25607617 25608200 -177477332 + LTR14B LTR ERVK 4 608 0 2294 93 14 14 chr5 25608200 25608555 -177476977 + L1P LINE L1 4233 4587 -1559 284 128 21 0 chr5 25609490 25609537 -177475995 - L1PB4 LINE L1 -60 6096 6049 243 369 35 28 chr5 25609610 25609865 -177475667 - L1ME LINE L1 -5712 358 102 231 88 0 0 chr5 25610220 25610254 -177475278 + (CA)n Simple_repeat Simple_repeat 1 34 0 258 339 47 47 chr5 25610594 25610765 -177474767 + MIR SINE MIR 6 176 -86 1495 182 64 33 chr5 25610983 25611313 -177474219 - MER46B DNA MER2_type 0 236 22 2070 120 19 3 chr5 25611333 25611641 -177473891 - AluSp SINE Alu 0 313 1 21 0 0 0 chr5 25612908 25612929 -177472603 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr5 25612962 25613003 -177472529 + AT_rich Low_complexity Low_complexity 1 41 0 427 318 108 0 chr5 25613136 25613312 -177472220 - MIR SINE MIR -65 197 3 734 244 6 0 chr5 25613833 25613997 -177471535 + MER2 DNA MER2_type 1 165 -180 222 204 0 0 chr5 25614236 25614285 -177471247 + (CA)n Simple_repeat Simple_repeat 2 50 0 2252 193 27 2 chr5 25614408 25614822 -177470710 - MSTB LTR MaLR -2 424 1 22 56 0 0 chr5 25615246 25615282 -177470250 + AT_rich Low_complexity Low_complexity 1 36 0 1704 188 10 0 chr5 25615585 25615878 -177469654 - AluSx SINE Alu -16 296 1 362 264 11 0 chr5 25616118 25616205 -177469327 - MIR SINE MIR -97 165 78 1981 146 3 0 chr5 25617187 25617488 -177468044 + AluSx SINE Alu 1 302 -10 206 0 69 0 chr5 25617555 25617584 -177467948 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 221 149 43 0 chr5 25618372 25618419 -177467113 + GA-rich Low_complexity Low_complexity 3 51 0 2618 55 0 0 chr5 25618738 25619047 -177466485 - AluY SINE Alu -2 309 1 6566 68 3 10 chr5 25619355 25620248 -177465284 + L1PA6 LINE L1 5268 6154 0 1080 234 94 12 chr5 25620249 25620505 -177465027 - LTR3 LTR ERVK -151 281 5 7139 98 3 1 chr5 25620509 25621487 -177464045 - HERVK3 LTR ERVK 0 7243 6264 4338 127 11 1 chr5 25621482 25622150 -177463382 - HERVK3 LTR ERVK -1885 5358 4685 * 1364 95 0 0 chr5 25622149 25622338 -177463194 - HERVK3 LTR ERVK -2936 4307 4119 * 15136 127 29 8 chr5 25622325 25624602 -177460930 - HERVK3 LTR ERVK -4333 2910 579 2122 113 0 28 chr5 25624602 25624920 -177460612 - AluSc SINE Alu 0 309 1 15136 127 29 8 chr5 25624920 25625030 -177460502 - HERVK3 LTR ERVK -6664 579 473 1168 193 88 40 chr5 25625030 25625304 -177460228 - LTR3 LTR ERVK -141 291 5 638 174 28 69 chr5 25625299 25625476 -177460056 - LTR48 LTR ERV1 -591 53 3 * 1903 125 4 7 chr5 25625915 25626196 -177459336 + AluSg SINE Alu 1 280 -30 21 0 0 0 chr5 25627547 25627568 -177457964 + AT_rich Low_complexity Low_complexity 1 21 0 476 291 118 17 chr5 25627771 25628008 -177457524 + MLT1J LTR MaLR 12 272 -239 23 0 0 0 chr5 25628386 25628409 -177457123 + AT_rich Low_complexity Low_complexity 1 23 0 207 186 0 0 chr5 25629145 25629188 -177456344 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 29 84 0 0 chr5 25629471 25629542 -177455990 + AT_rich Low_complexity Low_complexity 1 71 0 246 315 11 0 chr5 25634645 25634734 -177450798 + CT-rich Low_complexity Low_complexity 1 90 0 24 32 0 0 chr5 25635934 25635965 -177449567 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr5 25636733 25636759 -177448773 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 25637473 25637502 -177448030 + AT_rich Low_complexity Low_complexity 1 29 0 258 259 0 0 chr5 25637690 25637748 -177447784 - L2 LINE L2 0 3313 3256 605 87 0 0 chr5 25638287 25638379 -177447153 - L1PA15 LINE L1 -2 6163 6072 707 250 91 14 chr5 25638638 25638846 -177446686 + MIR SINE MIR 19 242 -20 23 0 0 0 chr5 25638967 25638990 -177446542 + AT_rich Low_complexity Low_complexity 1 23 0 1566 168 6 84 chr5 25640113 25640447 -177445085 - MER1B DNA MER1_type 0 339 32 734 224 23 74 chr5 25640455 25640793 -177444739 - L1MC/D LINE L1 -743 5403 5220 2055 126 13 3 chr5 25640793 25641103 -177444429 - AluSq SINE Alu 0 313 1 734 224 23 74 chr5 25641103 25641238 -177444294 - L1MC/D LINE L1 -926 5220 5080 242 29 29 0 chr5 25641473 25641508 -177444024 + (TC)n Simple_repeat Simple_repeat 2 37 0 251 276 84 49 chr5 25641642 25641815 -177443717 - MLT1F1 LTR MaLR -365 225 45 272 291 77 8 chr5 25641815 25641932 -177443600 - MLT1G1 LTR MaLR -470 125 1 775 280 54 33 chr5 25641956 25642474 -177443058 + HAL1 LINE L1 1045 1573 -934 263 299 103 39 chr5 25642560 25642841 -177442691 + HAL1 LINE L1 1761 2059 -448 25 31 0 0 chr5 25643165 25643197 -177442335 + AT_rich Low_complexity Low_complexity 1 32 0 284 307 52 16 chr5 25643971 25644222 -177441310 + L1M4 LINE L1 5016 5275 -871 737 354 114 13 chr5 25644327 25644870 -177440662 - L2 LINE L2 -295 2977 2383 272 256 39 0 chr5 25645179 25645257 -177440275 - L1ME3A LINE L1 -4 6166 6086 427 282 79 71 chr5 25645373 25645622 -177439910 - L1MEc LINE L1 -4579 1817 1571 2330 100 0 0 chr5 25645622 25645921 -177439611 + AluSq SINE Alu 1 299 -14 427 282 79 71 chr5 25645921 25646581 -177438951 - L1MEc LINE L1 -4825 1571 901 1734 197 16 94 chr5 25646769 25647052 -177438480 + MLT2C2 LTR ERVL 3 242 -222 1983 131 27 3 chr5 25647052 25647350 -177438182 + AluSx SINE Alu 1 305 -7 1734 197 16 94 chr5 25647350 25647502 -177438030 + MLT2C2 LTR ERVL 242 404 -60 318 294 22 7 chr5 25648787 25648923 -177436609 + (TA)n Simple_repeat Simple_repeat 1 138 0 189 0 0 0 chr5 25649270 25649291 -177436241 + (CA)n Simple_repeat Simple_repeat 2 22 0 988 205 81 77 chr5 25649642 25649939 -177435593 - AluJo SINE Alu -4 298 1 2177 112 0 0 chr5 25651163 25651459 -177434073 - AluSc SINE Alu -13 296 1 1947 186 5 22 chr5 25652491 25652827 -177432705 + MLT1A1 LTR MaLR 1 332 -33 1870 155 77 0 chr5 25652827 25653150 -177432382 - MER7A DNA MER2_type 0 346 1 1947 186 5 22 chr5 25653150 25653183 -177432349 + MLT1A1 LTR MaLR 332 364 -1 682 218 32 110 chr5 25653416 25653758 -177431774 - L1ME3A LINE L1 -743 5403 5224 2084 115 13 3 chr5 25653758 25654062 -177431470 - AluSq SINE Alu -6 307 1 682 218 32 110 chr5 25654062 25654197 -177431335 - L1ME3A LINE L1 -922 5224 5080 1772 244 61 56 chr5 25654215 25654281 -177431251 - L1ME3A LINE L1 -1687 4459 4395 1525 201 10 3 chr5 25654281 25654575 -177430957 - AluJo SINE Alu -5 307 12 1772 244 61 56 chr5 25654575 25655365 -177430167 - L1ME3A LINE L1 -1751 4395 3599 289 263 61 20 chr5 25657276 25657375 -177428157 + MIR SINE MIR 35 137 -71 896 198 71 45 chr5 25657453 25657721 -177427811 - ORSL DNA AcHobo 0 275 1 225 94 0 0 chr5 25658029 25658061 -177427471 + (CA)n Simple_repeat Simple_repeat 2 33 0 209 346 0 26 chr5 25658086 25658164 -177427368 + L2 LINE L2 3016 3091 -181 27 0 0 0 chr5 25660691 25660718 -177424814 + AT_rich Low_complexity Low_complexity 1 27 0 304 250 76 22 chr5 25661309 25661401 -177424131 + MER5A DNA MER1_type 10 106 -83 23 33 0 0 chr5 25661534 25661564 -177423968 + AT_rich Low_complexity Low_complexity 1 30 0 269 256 104 76 chr5 25663431 25663681 -177421851 - MER20B DNA MER1_type -8 775 519 186 103 0 0 chr5 25663691 25663720 -177421812 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 251 355 11 0 chr5 25663720 25663813 -177421719 - L2 LINE L2 -15 3298 3205 198 0 0 0 chr5 25663843 25663865 -177421667 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 704 266 73 68 chr5 25663899 25664397 -177421135 - L2 LINE L2 -279 3034 2531 243 0 0 0 chr5 25664523 25664550 -177420982 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 183 42 0 0 chr5 25665012 25665036 -177420496 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 207 100 0 0 chr5 25665719 25665749 -177419783 + (TA)n Simple_repeat Simple_repeat 2 31 0 226 382 99 8 chr5 25668081 25668212 -177417320 + MIR3 SINE MIR 6 148 -60 26 88 0 0 chr5 25668303 25668371 -177417161 + AT_rich Low_complexity Low_complexity 1 68 0 181 284 171 0 chr5 25669485 25669573 -177415959 - L2 LINE L2 0 3272 3170 2542 40 0 0 chr5 25671509 25671812 -177413720 + AluY SINE Alu 1 303 -8 185 94 31 0 chr5 25671823 25671855 -177413677 + (TTA)n Simple_repeat Simple_repeat 1 33 0 2171 110 0 16 chr5 25671910 25672218 -177413314 + AluSq SINE Alu 3 305 -8 2125 100 0 4 chr5 25672929 25673210 -177412322 + AluSq SINE Alu 1 280 -33 1727 178 7 3 chr5 25673507 25673805 -177411727 + AluJo SINE Alu 1 299 -13 2004 119 3 10 chr5 25673884 25674154 -177411378 + AluSc SINE Alu 1 270 -39 207 0 0 0 chr5 25674154 25674177 -177411355 + (TC)n Simple_repeat Simple_repeat 1 23 0 2004 119 3 10 chr5 25674177 25674217 -177411315 + AluSc SINE Alu 270 309 0 2235 105 0 0 chr5 25674710 25675014 -177410518 + AluSg1 SINE Alu 1 304 -5 21 0 0 0 chr5 25675194 25675215 -177410317 + AT_rich Low_complexity Low_complexity 1 21 0 362 306 142 27 chr5 25675429 25675951 -177409581 - L1MC4a LINE L1 -1914 5894 5313 22 0 0 0 chr5 25676007 25676029 -177409503 + AT_rich Low_complexity Low_complexity 1 22 0 226 236 70 16 chr5 25676292 25676394 -177409138 - L1MC/D LINE L1 -559 5603 5517 783 285 46 54 chr5 25676759 25677248 -177408284 - L2 LINE L2 -26 3287 2799 1924 221 88 7 chr5 25677248 25677713 -177407819 + MLT1D LTR MaLR 1 503 -2 783 285 46 54 chr5 25677713 25677810 -177407722 - L2 LINE L2 -514 2799 2703 476 78 16 0 chr5 25677810 25677896 -177407636 + L1PA12 LINE L1 6031 6120 -41 316 375 11 11 chr5 25677919 25678103 -177407429 + L1M4 LINE L1 3543 3726 -2420 671 76 0 0 chr5 25678140 25678232 -177407300 + L1PA13 LINE L1 6068 6159 -4 905 310 165 36 chr5 25678257 25678986 -177406546 - L2 LINE L2 -783 2531 1709 249 146 0 0 chr5 25678986 25679034 -177406498 + (TA)n Simple_repeat Simple_repeat 2 49 0 350 310 66 40 chr5 25679035 25679639 -177405893 - L1MEc LINE L1 -1984 4231 3612 2925 234 93 25 chr5 25680963 25681932 -177403600 - L1MC2 LINE L1 0 7766 6137 1887 127 34 0 chr5 25682889 25683180 -177402352 - AluSq SINE Alu 0 313 13 376 265 80 10 chr5 25683319 25683519 -177402013 - L1MEc LINE L1 -4113 2283 2070 2067 217 67 22 chr5 25683552 25684086 -177401446 - Tigger6a DNA MER2_type -423 660 103 2356 45 0 7 chr5 25684086 25684374 -177401158 + AluY SINE Alu 1 286 -25 287 206 46 15 chr5 25684374 25684505 -177401027 + (TA)n Simple_repeat Simple_repeat 2 136 0 2525 46 0 0 chr5 25684548 25684852 -177400680 - AluY SINE Alu -7 304 1 231 204 0 0 chr5 25685288 25685342 -177400190 + T-rich Low_complexity Low_complexity 1 54 0 804 228 46 20 chr5 25686342 25686539 -177398993 - MER63A DNA MER1_type -2 208 7 183 80 0 0 chr5 25687453 25687478 -177398054 + (TA)n Simple_repeat Simple_repeat 1 25 0 394 328 109 0 chr5 25687539 25687722 -177397810 - LTR16A LTR ERVL -52 398 196 2078 97 7 10 chr5 25688064 25688363 -177397169 + AluSx SINE Alu 1 298 -14 30 0 0 0 chr5 25688463 25688493 -177397039 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 25688510 25688531 -177397001 + AT_rich Low_complexity Low_complexity 1 21 0 2764 176 45 35 chr5 25688714 25689004 -177396528 - L1MB4 LINE L1 -2 6178 5892 2046 129 0 0 chr5 25689004 25689298 -177396234 - AluSg SINE Alu -14 296 3 2764 176 45 35 chr5 25689298 25689827 -177395705 - L1MB4 LINE L1 -288 5892 5300 2092 254 82 44 chr5 25690336 25691782 -177393750 - L1ME2 LINE L1 -10 6154 4764 2021 142 3 0 chr5 25691782 25692085 -177393447 + AluSx SINE Alu 1 304 -8 2092 254 82 44 chr5 25692085 25692143 -177393389 - L1ME2 LINE L1 -1400 4764 4710 1181 212 53 70 chr5 25692143 25692335 -177393197 - MLT1B LTR MaLR 0 390 196 210 91 0 0 chr5 25692335 25692368 -177393164 + (TG)n Simple_repeat Simple_repeat 1 33 0 1181 212 53 70 chr5 25692368 25692572 -177392960 - MLT1B LTR MaLR -194 196 1 2092 254 82 44 chr5 25692572 25692965 -177392567 - L1ME2 LINE L1 -1454 4710 4147 450 306 49 0 chr5 25693345 25693528 -177392004 + L1MC4 LINE L1 6458 6649 -1393 1081 250 105 10 chr5 25693896 25694280 -177391252 + L1MC4 LINE L1 6664 7052 -943 960 297 94 41 chr5 25694287 25694324 -177391208 + L1MC4 LINE L1 7239 7273 -769 2080 54 12 75 chr5 25694324 25694656 -177390876 - AluY SINE Alu 0 311 1 960 297 94 41 chr5 25694656 25695247 -177390285 + L1MC4 LINE L1 7273 7900 -142 331 323 21 27 chr5 25695321 25695507 -177390025 - L1ME2 LINE L1 -1955 4191 4007 208 357 0 0 chr5 25695615 25695693 -177389839 + MIR SINE MIR 54 132 -76 24 0 0 0 chr5 25696751 25696775 -177388757 + AT_rich Low_complexity Low_complexity 1 24 0 444 314 78 25 chr5 25696996 25697200 -177388332 - MIR SINE MIR 0 262 48 193 289 55 55 chr5 25697449 25697577 -177387955 + MIR SINE MIR 89 216 -46 459 0 0 0 chr5 25697873 25697924 -177387608 + (CA)n Simple_repeat Simple_repeat 2 52 0 24 67 0 0 chr5 25698918 25698963 -177386569 + AT_rich Low_complexity Low_complexity 1 45 0 27 81 0 0 chr5 25699585 25699647 -177385885 + AT_rich Low_complexity Low_complexity 1 62 0 26 50 0 0 chr5 25701359 25701399 -177384133 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 25701551 25701573 -177383959 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 25701685 25701706 -177383826 + AT_rich Low_complexity Low_complexity 1 21 0 435 313 62 35 chr5 25702507 25702734 -177382798 + LTR40a LTR ERVL 245 477 -42 21 36 0 0 chr5 25703217 25703245 -177382287 + AT_rich Low_complexity Low_complexity 1 28 0 300 268 29 36 chr5 25703438 25703576 -177381956 + HAL1 LINE L1 1486 1622 -885 423 0 0 0 chr5 25703604 25703651 -177381881 + (CA)n Simple_repeat Simple_repeat 1 47 0 29 0 0 0 chr5 25706570 25706599 -177378933 + AT_rich Low_complexity Low_complexity 1 29 0 339 381 34 53 chr5 25707138 25707403 -177378129 + MER115 DNA AcHobo 68 327 -366 567 264 50 0 chr5 25707616 25707775 -177377757 + MER115 DNA AcHobo 519 685 -8 209 189 0 0 chr5 25710935 25710972 -177374560 + A-rich Low_complexity Low_complexity 4 40 0 1390 138 5 5 chr5 25712629 25712881 -177372651 - AluSg/x SINE Alu 0 327 76 241 295 9 36 chr5 25713113 25713225 -177372307 - MIR SINE MIR -50 212 104 505 186 99 88 chr5 25713225 25713488 -177372044 - MER33 DNA MER1_type -58 266 1 228 345 86 36 chr5 25713491 25713711 -177371821 + MIR SINE MIR 27 257 -5 183 80 0 0 chr5 25713723 25713748 -177371784 + (TTA)n Simple_repeat Simple_repeat 2 26 0 590 242 95 57 chr5 25713923 25714134 -177371398 + MER20 DNA MER1_type 1 219 0 2629 97 6 0 chr5 25714219 25714581 -177370951 + THE1B LTR MaLR 1 364 0 257 351 58 27 chr5 25714796 25715021 -177370511 - L2 LINE L2 -213 3059 2828 189 74 0 0 chr5 25715964 25715991 -177369541 + (A)n Simple_repeat Simple_repeat 1 27 0 261 358 28 39 chr5 25716902 25716980 -177368552 - MIR SINE MIR -31 231 154 391 75 194 0 chr5 25716980 25717047 -177368485 - MADE1 DNA Mariner 0 80 1 261 358 28 39 chr5 25717047 25717147 -177368385 - MIR SINE MIR -108 154 55 288 237 0 0 chr5 25717948 25718007 -177367525 - L2 LINE L2 0 3272 3214 186 103 0 0 chr5 25718121 25718150 -177367382 + (CA)n Simple_repeat Simple_repeat 2 30 0 1999 132 48 6 chr5 25718225 25718558 -177366974 + MER7A DNA MER2_type 1 345 -1 371 264 14 0 chr5 25718577 25718869 -177366663 + (TA)n Simple_repeat Simple_repeat 1 296 0 23 33 0 0 chr5 25722579 25722609 -177362923 + AT_rich Low_complexity Low_complexity 1 30 0 217 238 0 0 chr5 25722621 25722663 -177362869 + (TATG)n Simple_repeat Simple_repeat 2 43 0 297 0 0 0 chr5 25723479 25723512 -177362020 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 394 318 98 18 chr5 25723513 25723790 -177361742 - HAL1 LINE L1 -722 1785 1487 2036 114 7 0 chr5 25723823 25724147 -177361385 - AluSg SINE Alu 0 326 1 1364 92 63 24 chr5 25724515 25724721 -177360811 - AluSp SINE Alu -12 301 88 1187 113 6 0 chr5 25724724 25724883 -177360649 - AluSp SINE Alu -153 160 1 1563 156 92 18 chr5 25725140 25725422 -177360110 + AluSx SINE Alu 1 303 -9 300 308 33 34 chr5 25725711 25725958 -177359574 - L1MC4a LINE L1 -208 5956 5707 987 226 160 34 chr5 25725983 25726364 -177359168 + MLT1C LTR MaLR 34 462 -5 366 322 40 17 chr5 25726365 25726639 -177358893 - L1MC4a LINE L1 -586 5576 5297 21 0 0 0 chr5 25726871 25726892 -177358640 + AT_rich Low_complexity Low_complexity 1 21 0 2087 144 0 0 chr5 25726955 25727261 -177358271 + AluSx SINE Alu 1 306 -6 390 269 0 0 chr5 25727630 25727775 -177357757 + (TA)n Simple_repeat Simple_repeat 2 146 0 302 302 50 43 chr5 25728572 25728850 -177356682 - L1MC4 LINE L1 -1004 7038 6759 2863 242 54 29 chr5 25729289 25730067 -177355465 + L1MC4a LINE L1 6712 7518 -290 2442 101 31 6 chr5 25730067 25730422 -177355110 - THE1B LTR MaLR 0 364 1 2863 242 54 29 chr5 25730422 25730569 -177354963 + L1MC4a LINE L1 7518 7660 -148 23 33 0 0 chr5 25731027 25731057 -177354475 + AT_rich Low_complexity Low_complexity 1 30 0 257 307 47 13 chr5 25731085 25731235 -177354297 - L1M4 LINE L1 -3316 2830 2676 21 0 0 0 chr5 25731314 25731335 -177354197 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr5 25732039 25732079 -177353453 + AT_rich Low_complexity Low_complexity 1 40 0 328 299 45 8 chr5 25732240 25732374 -177353158 - L2 LINE L2 -240 3073 2935 818 192 7 0 chr5 25732549 25732700 -177352832 - MLT1B LTR MaLR 0 390 239 1911 141 23 3 chr5 25732827 25733132 -177352400 + AluSx SINE Alu 1 311 -1 461 206 98 10 chr5 25733847 25733974 -177351558 + FLAM_A SINE Alu 5 140 0 2262 113 0 14 chr5 25733991 25734344 -177351188 - L1PA13 LINE L1 -5 6158 5811 480 18 0 0 chr5 25734553 25734610 -177350922 + (TC)n Simple_repeat Simple_repeat 2 58 0 2385 75 3 3 chr5 25736607 25736912 -177348620 + AluSg SINE Alu 1 305 -5 1512 208 20 10 chr5 25737327 25737620 -177347912 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr5 25738759 25738780 -177346752 + AT_rich Low_complexity Low_complexity 1 21 0 279 122 0 0 chr5 25740629 25740678 -177344854 + (CAT)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 25741753 25741774 -177343758 + AT_rich Low_complexity Low_complexity 1 21 0 401 333 44 48 chr5 25742467 25742719 -177342813 + MIR SINE MIR 2 252 -10 25 0 0 0 chr5 25742862 25742887 -177342645 + AT_rich Low_complexity Low_complexity 1 25 0 1699 174 7 16 chr5 25742995 25743299 -177342233 - AluSx SINE Alu -11 301 1 2028 137 55 25 chr5 25743673 25744037 -177341495 - THE1C LTR MaLR 0 375 1 242 325 12 24 chr5 25744165 25744248 -177341284 + MER5A DNA MER1_type 78 159 -30 240 257 50 40 chr5 25744264 25744365 -177341167 - MARNA DNA Mariner -348 238 137 336 24 0 0 chr5 25744678 25744719 -177340813 + (TG)n Simple_repeat Simple_repeat 2 42 0 739 321 25 4 chr5 25745821 25746064 -177339468 - MIR SINE MIR -4 258 11 305 315 36 0 chr5 25746612 25746723 -177338809 + L1MC4 LINE L1 6589 6703 -1339 * 307 306 24 0 chr5 25746643 25746728 -177338804 - L1MC4 LINE L1 -1339 6703 6617 240 137 0 0 chr5 25746733 25746784 -177338748 - L1MC4 LINE L1 -1339 6703 6653 943 166 13 0 chr5 25746786 25746937 -177338595 - AluSg/x SINE Alu -25 285 133 24 0 0 0 chr5 25746938 25746962 -177338570 + AT_rich Low_complexity Low_complexity 1 24 0 305 257 0 83 chr5 25747907 25748016 -177337516 - L1MC4 LINE L1 -1329 6713 6614 298 328 44 33 chr5 25749216 25749399 -177336133 - L2 LINE L2 -44 3269 3085 241 254 56 14 chr5 25750608 25750679 -177334853 + MIR3 SINE MIR 96 169 -39 557 314 159 19 chr5 25751397 25751712 -177333820 + L2 LINE L2 2607 2965 -349 324 307 21 7 chr5 25751713 25751853 -177333679 + (TA)n Simple_repeat Simple_repeat 2 143 0 453 304 57 30 chr5 25751866 25752129 -177333403 + L2 LINE L2 2977 3246 -67 1223 241 71 3 chr5 25753570 25753906 -177331626 - MLT1A1 LTR MaLR -2 363 5 1671 173 9 43 chr5 25753928 25754072 -177331460 - MLT1A1-int LTR MaLR 0 1735 1588 2510 54 0 0 chr5 25754072 25754369 -177331163 + AluY SINE Alu 1 297 -14 1671 173 9 43 chr5 25754369 25754547 -177330985 - MLT1A1-int LTR MaLR -147 1588 1424 22 35 0 0 chr5 25754605 25754634 -177330898 + AT_rich Low_complexity Low_complexity 1 29 0 219 295 13 26 chr5 25755597 25755675 -177329857 + MIR3 SINE MIR 129 205 -3 770 202 8 97 chr5 25756229 25756467 -177329065 + MER20 DNA MER1_type 3 219 0 434 339 81 37 chr5 25758035 25758497 -177327035 - L2 LINE L2 -31 3282 2793 1192 252 153 46 chr5 25761425 25761948 -177323584 - MLT1E LTR MaLR 0 593 15 583 186 70 16 chr5 25762134 25762263 -177323269 - AluJo SINE Alu -176 136 1 187 314 0 0 chr5 25762275 25762326 -177323206 + MIR SINE MIR 57 107 -155 213 298 107 0 chr5 25762430 25762514 -177323018 - L2 LINE L2 -19 3253 3161 21 0 0 0 chr5 25763335 25763356 -177322176 + AT_rich Low_complexity Low_complexity 1 21 0 227 374 24 0 chr5 25764779 25764862 -177320670 + L2 LINE L2 3188 3272 0 2353 90 0 0 chr5 25764977 25765276 -177320256 + AluSc SINE Alu 1 299 -10 2272 115 0 0 chr5 25766929 25767241 -177318291 - AluSx SINE Alu 0 312 1 610 157 28 0 chr5 25767243 25767351 -177318181 - L1M2 LINE L1 -839 5473 5363 1788 250 47 20 chr5 25767353 25767861 -177317671 - L1ME1 LINE L1 -11 6155 5634 218 95 40 68 chr5 25768200 25768274 -177317258 + (TTATA)n Simple_repeat Simple_repeat 1 72 0 26 0 0 0 chr5 25768402 25768428 -177317104 + AT_rich Low_complexity Low_complexity 1 26 0 2112 120 7 7 chr5 25769475 25769783 -177315749 - AluSg SINE Alu -2 308 1 1755 205 92 66 chr5 25770707 25770792 -177314740 - MER34 LTR ERV1 -1 541 460 2615 42 3 0 chr5 25770792 25771102 -177314430 + AluY SINE Alu 1 311 0 1755 205 92 66 chr5 25771102 25771519 -177314013 - MER34 LTR ERV1 -82 460 26 24 53 0 0 chr5 25771530 25771568 -177313964 + AT_rich Low_complexity Low_complexity 1 38 0 321 252 56 19 chr5 25771649 25771756 -177313776 - MIR SINE MIR -38 224 114 378 271 28 9 chr5 25771831 25771938 -177313594 - MIR SINE MIR -105 157 49 561 258 71 7 chr5 25772056 25772211 -177313321 - MER45A DNA AcHobo -13 165 1 2145 71 0 14 chr5 25773393 25773688 -177311844 + AluY SINE Alu 1 291 -20 409 340 54 33 chr5 25774866 25775107 -177310425 - MIR SINE MIR -1 261 16 22 0 0 0 chr5 25775863 25775885 -177309647 + AT_rich Low_complexity Low_complexity 1 22 0 2079 127 0 3 chr5 25775914 25776205 -177309327 - AluSx SINE Alu -16 296 7 372 178 0 0 chr5 25776598 25776671 -177308861 + LTR30 LTR ERV1 552 624 -98 200 59 29 0 chr5 25776678 25776712 -177308820 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 26 64 0 0 chr5 25779306 25779353 -177306179 + AT_rich Low_complexity Low_complexity 1 47 0 2024 101 9 32 chr5 25779738 25780054 -177305478 - AluSc SINE Alu 0 309 1 37 62 0 0 chr5 25780858 25780923 -177304609 + AT_rich Low_complexity Low_complexity 1 65 0 25 65 0 0 chr5 25781885 25781931 -177303601 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 25782446 25782468 -177303064 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 25782976 25782997 -177302535 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 25783678 25783715 -177301817 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr5 25785170 25785195 -177300337 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 25785283 25785305 -177300227 + AT_rich Low_complexity Low_complexity 1 22 0 289 351 37 21 chr5 25785505 25785693 -177299839 - MIR SINE MIR -14 248 58 34 24 0 0 chr5 25788460 25788501 -177297031 + AT_rich Low_complexity Low_complexity 1 41 0 199 366 0 14 chr5 25790372 25790443 -177295089 - L2 LINE L2 -5 3308 3239 1575 181 30 20 chr5 25790545 25790729 -177294803 - AluJb SINE Alu 0 312 122 365 38 57 0 chr5 25790729 25790782 -177294750 + T-rich Low_complexity Low_complexity 5 60 0 1575 181 30 20 chr5 25790782 25790900 -177294632 - AluJb SINE Alu -190 122 7 241 269 21 0 chr5 25791247 25791340 -177294192 + (TA)n Simple_repeat Simple_repeat 1 95 0 725 324 161 43 chr5 25792692 25793582 -177291950 + L2 LINE L2 2320 3312 -1 2347 141 61 4 chr5 25793735 25794195 -177291337 + LTR19A LTR ERV1 1 486 0 1150 234 72 34 chr5 25794624 25794863 -177290669 + MER4C LTR ERV1 1 229 -236 2135 105 3 16 chr5 25794863 25795167 -177290365 + AluSx SINE Alu 3 302 -10 1150 234 72 34 chr5 25795167 25795371 -177290161 + MER4C LTR ERV1 229 461 -4 549 121 43 26 chr5 25795500 25795616 -177289916 + MER4C-int LTR ERV1 135 252 -6346 219 23 93 0 chr5 25795779 25795822 -177289710 + (TTTG)n Simple_repeat Simple_repeat 4 50 0 1928 140 0 10 chr5 25795829 25796121 -177289411 - AluSx SINE Alu -23 289 1 1307 198 104 45 chr5 25796346 25796720 -177288812 + MER4C-int LTR ERV1 994 1389 -4942 1280 229 45 138 chr5 25796839 25797554 -177287978 + MER4C-int LTR ERV1 2360 3007 -4530 2676 211 80 69 chr5 25797570 25798510 -177287022 + LTR49-int LTR ERV1 1603 2531 -4255 1764 181 0 0 chr5 25798510 25798791 -177286741 + AluSx SINE Alu 3 283 -29 207 100 0 0 chr5 25798791 25798821 -177286711 + (TAAG)n Simple_repeat Simple_repeat 2 31 0 2676 211 80 69 chr5 25798821 25799706 -177285826 + LTR49-int LTR ERV1 2530 4763 -2023 * 3859 186 28 18 chr5 25799687 25800509 -177285023 + LTR49-int LTR ERV1 4479 5308 -1023 1039 189 75 137 chr5 25800551 25801047 -177284485 + MER4C LTR ERV1 1 465 0 320 244 35 29 chr5 25801413 25801585 -177283947 + (TA)n Simple_repeat Simple_repeat 2 174 0 684 287 78 4 chr5 25803473 25803703 -177281829 - MIR SINE MIR -1 261 15 2025 138 3 0 chr5 25804391 25804696 -177280836 - AluSx SINE Alu -6 306 1 488 267 38 15 chr5 25805624 25805755 -177279777 - MIR SINE MIR -105 157 24 2231 116 3 0 chr5 25806786 25807096 -177278436 + AluSp SINE Alu 3 313 0 25 65 0 0 chr5 25807115 25807161 -177278371 + AT_rich Low_complexity Low_complexity 1 46 0 23 33 0 0 chr5 25807212 25807242 -177278290 + AT_rich Low_complexity Low_complexity 1 30 0 302 271 28 14 chr5 25807282 25807426 -177278106 + (CATATA)n Simple_repeat Simple_repeat 5 150 0 348 250 111 32 chr5 25807658 25807995 -177277537 - L1M4 LINE L1 -3573 2573 2214 639 339 51 60 chr5 25808700 25808917 -177276615 - HAL1b LINE L1 -705 1726 1509 3019 203 21 89 chr5 25808917 25809956 -177275576 - LTR5 LTR ERVK -1 968 1 639 339 51 60 chr5 25809956 25810392 -177275140 - HAL1b LINE L1 -922 1509 1071 2317 156 11 36 chr5 25810392 25810834 -177274698 - MER61C LTR ERV1 -3 431 1 639 339 51 60 chr5 25810834 25810917 -177274615 - HAL1b LINE L1 -1360 1071 42 2816 113 30 38 chr5 25810962 25811431 -177274101 - MER4C LTR ERV1 0 465 1 1175 224 79 65 chr5 25811686 25812178 -177273354 - MLT1D LTR MaLR -2 503 5 2351 171 24 14 chr5 25812337 25812759 -177272773 + MSTB LTR MaLR 1 426 0 22 80 0 0 chr5 25813494 25813544 -177271988 + AT_rich Low_complexity Low_complexity 1 50 0 1731 122 93 4 chr5 25813632 25813902 -177271630 + AluSx SINE Alu 1 294 -18 206 238 38 62 chr5 25813914 25813994 -177271538 + MIR3 SINE MIR 91 168 -40 241 345 17 17 chr5 25814398 25814517 -177271015 - L2 LINE L2 -3 3310 3192 293 313 15 0 chr5 25815950 25816084 -177269448 + (TA)n Simple_repeat Simple_repeat 2 137 0 7456 156 34 39 chr5 25816265 25816847 -177268685 + Tigger1 DNA MER2_type 28 612 -1806 2126 54 0 11 chr5 25816847 25817124 -177268408 + L1PA5 LINE L1 5880 6153 -1 7456 156 34 39 chr5 25817124 25817687 -177267845 + Tigger1 DNA MER2_type 612 1166 -1252 1292 215 0 39 chr5 25817687 25817994 -177267538 + AluJo SINE Alu 1 295 -17 7456 156 34 39 chr5 25817994 25818292 -177267240 + Tigger1 DNA MER2_type 1166 1464 -954 451 129 14 0 chr5 25818359 25818429 -177267103 - Tigger1 DNA MER2_type -1241 1177 1107 5624 130 31 27 chr5 25818447 25818650 -177266882 + Tigger1 DNA MER2_type 1422 1623 -795 1840 136 7 33 chr5 25818650 25818952 -177266580 + AluSc SINE Alu 1 294 -15 5624 130 31 27 chr5 25818952 25819414 -177266118 + Tigger1 DNA MER2_type 1623 2095 -323 1253 158 74 87 chr5 25819414 25819712 -177265820 + AluSq SINE Alu 4 297 -16 5624 130 31 27 chr5 25819712 25820038 -177265494 + Tigger1 DNA MER2_type 2095 2418 0 1734 265 77 17 chr5 25820038 25820673 -177264859 - L1ME2 LINE L1 -115 6049 5377 1284 261 123 66 chr5 25820706 25821468 -177264064 - L1ME2 LINE L1 -1010 5136 4419 414 0 0 0 chr5 25821468 25821514 -177264018 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1870 154 3 3 chr5 25821521 25821806 -177263726 - AluJb SINE Alu -26 286 2 1284 261 123 66 chr5 25821806 25822271 -177263261 - L1ME2 LINE L1 -1732 4414 3831 268 374 9 9 chr5 25822332 25822439 -177263093 - MIR SINE MIR -148 114 8 2862 9 0 0 chr5 25822635 25822951 -177262581 - AluYb8 SINE Alu -2 316 1 4602 95 30 95 chr5 25823939 25824773 -177260759 + LTR17 LTR ERV1 1 780 0 2826 170 45 11 chr5 25825342 25825876 -177259656 + L1MC1 LINE L1 5538 6089 -244 522 0 0 0 chr5 25825883 25825941 -177259591 + (TA)n Simple_repeat Simple_repeat 1 58 0 2170 94 4 0 chr5 25825943 25826219 -177259313 + AluSp SINE Alu 1 277 -36 956 124 0 0 chr5 25826219 25826348 -177259184 + AluSg/x SINE Alu 160 288 -24 217 118 39 0 chr5 25826348 25826399 -177259133 + (TA)n Simple_repeat Simple_repeat 1 53 0 1226 176 9 0 chr5 25826406 25826622 -177258910 + L1MC1 LINE L1 6111 6328 -5 188 317 72 113 chr5 25827373 25827585 -177257947 - L2 LINE L2 -562 2752 2560 1940 197 7 31 chr5 25827585 25828006 -177257526 + LTR57 LTR ERVL 1 411 0 188 317 72 113 chr5 25828006 25828156 -177257376 - L2 LINE L2 -754 2560 2405 28 29 0 0 chr5 25828185 25828220 -177257312 + AT_rich Low_complexity Low_complexity 1 35 0 190 283 0 0 chr5 25829469 25829515 -177256017 + L2 LINE L2 3226 3271 -1 2173 116 0 0 chr5 25829750 25830060 -177255472 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 25830410 25830431 -177255101 + AT_rich Low_complexity Low_complexity 1 21 0 1493 176 50 58 chr5 25831824 25832183 -177253349 + MLT2C1 LTR ERVL 1 356 -41 245 128 21 0 chr5 25832184 25832231 -177253301 + (CA)n Simple_repeat Simple_repeat 2 49 0 2115 154 0 61 chr5 25832266 25832426 -177253106 + Tigger2 DNA MER2_type 2334 2502 -216 2081 86 7 7 chr5 25832426 25832729 -177252803 - AluSc SINE Alu 0 303 1 2115 154 0 61 chr5 25832729 25832975 -177252557 + Tigger2 DNA MER2_type 2502 2716 -2 2092 72 4 0 chr5 25832975 25833252 -177252280 + L1PA8 LINE L1 5875 6152 -20 180 179 0 0 chr5 25833271 25833310 -177252222 + GA-rich Low_complexity Low_complexity 2 40 0 230 311 31 66 chr5 25833773 25833969 -177251563 - MIR SINE MIR -71 191 3 2408 78 0 0 chr5 25834354 25834660 -177250872 + AluY SINE Alu 2 307 -4 25 65 0 0 chr5 25834810 25834856 -177250676 + AT_rich Low_complexity Low_complexity 1 46 0 306 271 16 70 chr5 25835584 25835713 -177249819 + MIR SINE MIR 100 221 -41 309 322 123 17 chr5 25836819 25837055 -177248477 + L1MC4a LINE L1 5607 5867 -1941 1552 194 69 3 chr5 25837098 25837417 -177248115 - MER2 DNA MER2_type -4 340 1 258 32 0 0 chr5 25837418 25837449 -177248083 + (CA)n Simple_repeat Simple_repeat 2 32 0 1317 252 24 24 chr5 25839440 25839813 -177245719 + LTR40a LTR ERVL 98 470 -49 2279 114 0 0 chr5 25840165 25840471 -177245061 - AluSq SINE Alu -7 306 1 22 0 0 0 chr5 25840931 25840953 -177244579 + AT_rich Low_complexity Low_complexity 1 22 0 1823 131 0 0 chr5 25841087 25841354 -177244178 - AluSx SINE Alu 0 312 46 2097 112 7 3 chr5 25842596 25842899 -177242633 + AluSp SINE Alu 1 304 -9 892 294 73 47 chr5 25843740 25844233 -177241299 + L1M4 LINE L1 2400 2878 -3268 2214 110 0 3 chr5 25844233 25844525 -177241007 + AluSc SINE Alu 1 291 -18 892 294 73 47 chr5 25844525 25844602 -177240930 + L1M4 LINE L1 2878 2951 -3195 2194 105 26 76 chr5 25844602 25844983 -177240549 + THE1B LTR MaLR 1 362 -2 892 294 73 47 chr5 25844983 25845228 -177240304 + L1M4 LINE L1 2951 3238 -2908 1198 267 124 32 chr5 25845239 25845771 -177239761 + L1ME3A LINE L1 5580 6160 -10 2921 221 26 10 chr5 25845942 25846567 -177238965 + MER39 LTR ERV1 73 707 0 295 295 63 11 chr5 25846993 25847088 -177238444 + HERVL LTR ERVL 4225 4324 -1161 662 352 35 41 chr5 25847270 25848083 -177237449 + HERVL LTR ERVL 4234 5365 -289 329 282 73 0 chr5 25848258 25848368 -177237164 + LTR16B LTR ERVL 108 225 -239 1077 231 108 10 chr5 25848371 25848678 -177236854 - MER67C LTR ERV1 -307 403 67 504 125 12 0 chr5 25848715 25848795 -177236737 - MER67D LTR ERV1 -433 81 1 271 246 0 0 chr5 25849245 25849302 -177236230 - MER4-int LTR ERV1 -5429 1169 1113 415 333 53 22 chr5 25849865 25850093 -177235439 - MIR SINE MIR -18 244 10 440 93 0 0 chr5 25850725 25850800 -177234732 - Alu SINE Alu 0 310 236 1406 72 0 6 chr5 25850805 25850986 -177234546 + AluSg/x SINE Alu 126 305 -7 2119 119 3 0 chr5 25851117 25851427 -177234105 + AluSp SINE Alu 1 311 -2 21 57 0 0 chr5 25851773 25851808 -177233724 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr5 25851957 25851983 -177233549 + AT_rich Low_complexity Low_complexity 1 26 0 22 70 0 0 chr5 25852090 25852133 -177233399 + AT_rich Low_complexity Low_complexity 1 43 0 34 0 0 0 chr5 25852189 25852223 -177233309 + AT_rich Low_complexity Low_complexity 1 34 0 36 62 0 0 chr5 25852574 25852638 -177232894 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr5 25852967 25852989 -177232543 + AT_rich Low_complexity Low_complexity 1 22 0 5964 254 56 27 chr5 25853707 25855905 -177229627 + L1MA6 LINE L1 168 2301 -4907 1287 225 10 50 chr5 25855905 25856045 -177229487 + AluJo SINE Alu 3 126 -186 2067 92 0 66 chr5 25856045 25856362 -177229170 + AluY SINE Alu 1 296 -15 817 245 16 16 chr5 25856331 25856519 -177229013 + AluJo SINE Alu 101 288 -24 1287 225 10 50 chr5 25856362 25856519 -177229013 + AluJo SINE Alu 126 288 -24 5964 254 56 27 chr5 25856519 25857627 -177227905 + L1MA6 LINE L1 2301 3375 -3833 2320 88 0 3 chr5 25857627 25857943 -177227589 + AluSc SINE Alu 1 315 0 5964 254 56 27 chr5 25857943 25858691 -177226841 + L1MA6 LINE L1 3375 4899 -2309 6414 180 49 5 chr5 25858698 25859361 -177226171 + L1MA6 LINE L1 5009 5641 -1721 222 37 0 0 chr5 25859361 25859388 -177226144 + (CA)n Simple_repeat Simple_repeat 2 28 0 6414 180 49 5 chr5 25859388 25860282 -177225250 + L1MA6 LINE L1 5641 6642 -720 2912 176 177 16 chr5 25860282 25860993 -177224539 + LTR1B LTR ERV1 1 826 0 6414 180 49 5 chr5 25860993 25861022 -177224510 + L1MA6 LINE L1 6642 6668 -694 1803 188 18 18 chr5 25861067 25861456 -177224076 + L1MA6 LINE L1 6974 7362 0 490 304 103 0 chr5 25861641 25861845 -177223687 + MIR SINE MIR 19 243 -19 27 49 0 0 chr5 25861861 25861902 -177223630 + AT_rich Low_complexity Low_complexity 1 41 0 320 319 65 18 chr5 25862204 25862440 -177223092 + L1ME LINE L1 5401 5653 -517 344 333 87 26 chr5 25863101 25863492 -177222040 - L1M4 LINE L1 -1499 4647 4233 2409 57 14 14 chr5 25864152 25864449 -177221083 - AluY SINE Alu -14 297 1 283 315 14 7 chr5 25864761 25864904 -177220628 - L1M4 LINE L1 -3317 2829 2686 22 0 0 0 chr5 25865150 25865172 -177220360 + AT_rich Low_complexity Low_complexity 1 22 0 644 170 28 0 chr5 25865433 25865539 -177219993 + FLAM_C SINE Alu 3 111 -32 325 248 124 55 chr5 25865570 25865788 -177219744 - L1M4 LINE L1 -1560 4586 4354 25 51 0 0 chr5 25866398 25866437 -177219095 + AT_rich Low_complexity Low_complexity 1 39 0 1941 120 25 0 chr5 25866501 25866801 -177218731 - AluSx SINE Alu 0 307 1 29 28 0 0 chr5 25867006 25867042 -177218490 + AT_rich Low_complexity Low_complexity 1 36 0 220 255 32 32 chr5 25867127 25867221 -177218311 + (CATATA)n Simple_repeat Simple_repeat 5 98 0 25 0 0 0 chr5 25868116 25868141 -177217391 + AT_rich Low_complexity Low_complexity 1 25 0 244 321 12 0 chr5 25868195 25868279 -177217253 + (TA)n Simple_repeat Simple_repeat 1 85 0 270 274 145 64 chr5 25868626 25868860 -177216672 + L3 LINE CR1 1138 1390 -187 22 70 0 0 chr5 25871203 25871246 -177214286 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr5 25872389 25872412 -177213120 + AT_rich Low_complexity Low_complexity 1 23 0 1925 235 13 17 chr5 25872470 25872930 -177212602 + MLT1C-int LTR MaLR 247 704 -667 249 167 17 17 chr5 25872927 25872987 -177212545 + MLT1C-int LTR MaLR 828 887 -484 * 994 234 25 12 chr5 25873190 25873434 -177212098 + MLT1C-int LTR MaLR 1125 1371 0 1339 237 90 18 chr5 25873436 25873870 -177211662 + MLT1C LTR MaLR 3 467 0 1691 116 0 0 chr5 25874546 25874779 -177210753 - LTR12 LTR ERV1 -2 712 480 298 274 11 0 chr5 25874779 25874874 -177210658 - LTR30 LTR ERV1 -79 643 548 548 82 0 0 chr5 25874874 25874947 -177210585 - LTR12 LTR ERV1 -433 281 209 5655 100 1 0 chr5 25874950 25875720 -177209812 - HERV17 LTR ERV1 -3 8396 7626 1841 141 69 97 chr5 25875718 25876638 -177208894 - HERV17 LTR ERV1 -5156 1740 703 * 5221 119 6 20 chr5 25876605 25877418 -177208114 - HERV17 LTR ERV1 -3419 4980 4179 2349 143 81 66 chr5 25877418 25877901 -177207631 + LTR2B LTR ERV1 1 490 0 4557 146 64 30 chr5 25877901 25879248 -177206284 + Harlequin LTR ERV1 1 1409 -5487 * 25773 75 2 7 chr5 25879241 25882609 -177202923 + Harlequin LTR ERV1 1818 5169 -1727 5128 97 14 10 chr5 25882597 25883328 -177202204 + Harlequin LTR ERV1 6163 6896 0 * 2260 170 36 45 chr5 25883328 25883822 -177201710 + LTR2B LTR ERV1 1 490 0 28038 104 12 26 chr5 25883822 25888021 -177197511 - HERV9 LTR ERV1 -4217 4182 40 706 137 0 0 chr5 25888034 25888136 -177197396 - LTR12 LTR ERV1 0 714 613 382 211 11 0 chr5 25888136 25888226 -177197306 - LTR30 LTR ERV1 -79 643 553 1781 98 29 8 chr5 25888227 25888534 -177196998 - LTR12 LTR ERV1 -406 2032 57 276 139 0 0 chr5 25888534 25888577 -177196955 - LTR30 LTR ERV1 -679 43 1 35 54 0 0 chr5 25889617 25889673 -177195859 + AT_rich Low_complexity Low_complexity 1 56 0 428 219 65 0 chr5 25890701 25890824 -177194708 + MER94 DNA DNA 1 131 -3 205 138 0 0 chr5 25891089 25891118 -177194414 + (TG)n Simple_repeat Simple_repeat 1 29 0 322 300 0 0 chr5 25891118 25891208 -177194324 - L1MC4 LINE L1 -1340 6702 6613 1775 165 3 25 chr5 25891622 25891937 -177193595 + AluJb SINE Alu 4 311 -1 1284 119 0 6 chr5 25894632 25894809 -177190723 + AluSc SINE Alu 114 289 -20 1965 137 3 13 chr5 25894809 25895122 -177190410 + AluSg SINE Alu 1 310 0 916 186 229 7 chr5 25896184 25896464 -177189068 - MER2 DNA MER2_type -2 342 1 815 159 22 7 chr5 25899600 25899738 -177185794 - L1PA16 LINE L1 -9 6157 6018 6851 64 13 0 chr5 25899800 25901001 -177184531 - L1PA7 LINE L1 -13 6141 4936 270 172 31 0 chr5 25901183 25901247 -177184285 + MER52A LTR ERV1 829 894 -861 22 70 0 0 chr5 25901599 25901642 -177183890 + AT_rich Low_complexity Low_complexity 1 43 0 15818 26 1 0 chr5 25902283 25904161 -177181371 - L1P1 LINE L1 -779 5367 3489 1954 9 0 9 chr5 25904158 25904387 -177181145 + L1P1 LINE L1 5362 5588 -567 * 1284 119 0 6 chr5 25904872 25905049 -177180483 + AluSc SINE Alu 114 289 -20 1965 137 3 13 chr5 25905049 25905362 -177180170 + AluSg SINE Alu 1 310 0 916 186 229 7 chr5 25906424 25906704 -177178828 - MER2 DNA MER2_type -2 342 1 809 159 22 7 chr5 25909840 25909978 -177175554 - L1PA16 LINE L1 -9 6157 6018 6808 65 13 0 chr5 25910040 25911241 -177174291 - L1PA7 LINE L1 -13 6141 4936 265 172 31 0 chr5 25911423 25911487 -177174045 + MER52A LTR ERV1 829 894 -861 22 70 0 0 chr5 25911839 25911882 -177173650 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr5 25912518 25912558 -177172974 + AT_rich Low_complexity Low_complexity 1 40 0 33 43 0 0 chr5 25912851 25912898 -177172634 + AT_rich Low_complexity Low_complexity 1 47 0 244 234 78 0 chr5 25913724 25913801 -177171731 - L1ME LINE L1 -526 5595 5513 23 33 0 0 chr5 25913874 25913904 -177171628 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 25914381 25914409 -177171123 + AT_rich Low_complexity Low_complexity 1 28 0 247 194 48 16 chr5 25914419 25914481 -177171051 - L1ME LINE L1 -454 5667 5604 209 341 23 0 chr5 25914725 25914813 -177170719 + MIR SINE MIR 54 143 -119 881 241 150 88 chr5 25915002 25915561 -177169971 + LTR28 LTR ERV1 1 594 -426 621 245 0 0 chr5 25916114 25916261 -177169271 + L1MA9 LINE L1 5647 5793 -519 230 152 0 0 chr5 25916276 25916322 -177169210 - LTR66 LTR ERVL -171 439 394 2466 159 25 82 chr5 25916324 25916885 -177168647 + L1MA9 LINE L1 5783 6311 -1 373 305 46 23 chr5 25917030 25917204 -177168328 - L1PBb LINE L1 -5656 1929 1752 379 314 131 49 chr5 25917398 25917643 -177167889 - L1PBb LINE L1 -5789 1796 1532 330 345 34 57 chr5 25918267 25918444 -177167088 - L1PBb LINE L1 -6015 1570 1398 896 326 69 49 chr5 25918579 25919177 -177166355 - L1M2 LINE L1 -6397 1188 10 1109 256 10 35 chr5 25919259 25919303 -177166229 - AluJo SINE Alu 0 311 267 2165 95 13 0 chr5 25919303 25919607 -177165925 + AluSp SINE Alu 1 308 -5 1109 256 10 35 chr5 25919607 25919873 -177165659 - AluJo SINE Alu -44 267 8 531 202 9 26 chr5 25919907 25920021 -177165511 - LOR1a LTR ERV1 0 497 386 2360 85 0 0 chr5 25921034 25921339 -177164193 - AluY SINE Alu -6 305 1 4962 68 36 29 chr5 25921869 25922588 -177162944 - L1PA8 LINE L1 -15 6157 5434 182 285 125 75 chr5 25922883 25923083 -177162449 - MIR SINE MIR -3 259 50 23 54 0 0 chr5 25923414 25923451 -177162081 + AT_rich Low_complexity Low_complexity 1 37 0 352 206 9 9 chr5 25923930 25924037 -177161495 + GA-rich Low_complexity Low_complexity 2 108 0 2187 55 7 4 chr5 25924263 25924538 -177160994 + AluY SINE Alu 34 309 -2 4443 194 15 66 chr5 25924551 25925504 -177160028 + L1MA8 LINE L1 4356 5142 -1149 1798 206 9 0 chr5 25925504 25925849 -177159683 - MER7A DNA MER2_type 0 346 1 4443 194 15 66 chr5 25925849 25926934 -177158598 + L1MA8 LINE L1 5142 6281 -10 1985 154 73 14 chr5 25926972 25927316 -177158216 - THE1B LTR MaLR 0 364 1 429 168 66 5 chr5 25927383 25927488 -177158044 - L1MB1 LINE L1 -10 6179 6066 240 122 54 54 chr5 25927492 25927566 -177157966 + (TATAG)n Simple_repeat Simple_repeat 2 75 0 986 160 6 33 chr5 25928082 25928263 -177157269 - AluJb SINE Alu -1 311 136 21 36 0 0 chr5 25928269 25928297 -177157235 + AT_rich Low_complexity Low_complexity 1 28 0 417 233 75 101 chr5 25928336 25928654 -177156878 - MER46C DNA MER2_type -7 331 22 718 194 46 104 chr5 25929615 25930001 -177155531 - MER89 LTR ERV1 -99 460 2 26 30 0 0 chr5 25930400 25930433 -177155099 + AT_rich Low_complexity Low_complexity 1 33 0 549 205 57 0 chr5 25931289 25931411 -177154121 + MLT1F1 LTR MaLR 3 131 -436 1009 239 12 12 chr5 25931413 25931573 -177153959 + L1MD3 LINE L1 7411 7573 -422 2034 211 135 40 chr5 25931573 25932327 -177153205 + LTR1B LTR ERV1 1 826 0 1009 239 12 12 chr5 25932327 25932421 -177153111 + L1MD3 LINE L1 7572 7665 -330 456 302 28 35 chr5 25932421 25932676 -177152856 - MER34B LTR ERV1 0 565 313 692 191 115 27 chr5 25932816 25932999 -177152533 + LTR1B LTR ERV1 369 567 -259 1204 196 69 16 chr5 25933103 25933409 -177152123 + L1MD3 LINE L1 7659 7980 -15 214 403 25 8 chr5 25933666 25933785 -177151747 + MIR SINE MIR 16 136 -72 2446 68 0 0 chr5 25933935 25934246 -177151286 + AluY SINE Alu 1 311 0 547 316 95 7 chr5 25934685 25935376 -177150156 + L1ME LINE L1 4969 5721 -441 312 325 57 0 chr5 25937750 25937873 -177147659 + MLT-int LTR MaLR 1185 1314 -421 2042 190 81 0 chr5 25937939 25938333 -177147199 + MLT1A1-int LTR MaLR 1310 1735 0 1404 215 24 53 chr5 25938333 25938709 -177146823 + MLT1A1 LTR MaLR 1 365 0 1143 188 0 27 chr5 25939318 25939541 -177145991 - AluJo SINE Alu -11 301 85 2274 98 0 0 chr5 25939868 25940164 -177145368 - AluSq SINE Alu -17 296 1 565 244 67 12 chr5 25940241 25940405 -177145127 - MER58B DNA MER1_type -2 339 167 262 203 0 34 chr5 25940416 25940475 -177145057 + Tigger5 DNA MER2_type 2263 2319 -4 26 0 0 0 chr5 25940646 25940672 -177144860 + AT_rich Low_complexity Low_complexity 1 26 0 500 281 96 65 chr5 25941162 25941757 -177143775 + HAL1 LINE L1 739 1351 -1156 2070 131 3 0 chr5 25941795 25942093 -177143439 - AluY SINE Alu -12 299 1 1267 97 102 0 chr5 25942249 25942445 -177143087 + L1PA10 LINE L1 5948 6163 -5 435 326 33 37 chr5 25942491 25942733 -177142799 + HAL1 LINE L1 1390 1630 -877 564 291 114 24 chr5 25942889 25943390 -177142142 + HAL1 LINE L1 1860 2405 -102 220 205 0 0 chr5 25943729 25943768 -177141764 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2163 110 0 17 chr5 25943769 25944069 -177141463 - AluSx SINE Alu -17 295 1 379 240 0 0 chr5 25944070 25944145 -177141387 - Charlie1 DNA MER1_type -1170 1591 1517 29 28 0 0 chr5 25944439 25944475 -177141057 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr5 25945128 25945163 -177140369 + AT_rich Low_complexity Low_complexity 1 35 0 284 246 15 0 chr5 25945889 25945954 -177139578 - tRNA-Phe-TTC tRNA tRNA -7 69 4 365 170 80 62 chr5 25946997 25947109 -177138423 + MER51D LTR ERV1 500 613 -44 1089 233 164 31 chr5 25947246 25947692 -177137840 - MLT1D LTR MaLR 0 505 1 542 304 13 27 chr5 25948578 25948802 -177136730 + ERVL LTR ERVL 4871 5091 -673 451 262 60 13 chr5 25949495 25949644 -177135888 + MLT2E LTR ERVL 32 187 -441 1830 177 124 111 chr5 25951265 25951339 -177134193 - MLT2D LTR ERVL 0 464 392 312 27 0 0 chr5 25951339 25951376 -177134156 + (CA)n Simple_repeat Simple_repeat 2 38 0 1830 177 124 111 chr5 25951376 25951601 -177133931 - MLT2D LTR ERVL -72 392 154 2130 139 128 8 chr5 25951601 25951983 -177133549 + MSTA LTR MaLR 1 428 0 1830 177 124 111 chr5 25951983 25952140 -177133392 - MLT2D LTR ERVL -310 154 1 29 0 0 0 chr5 25952222 25952251 -177133281 + AT_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr5 25952315 25952339 -177133193 + (CATA)n Simple_repeat Simple_repeat 3 26 0 23 0 0 0 chr5 25954747 25954770 -177130762 + AT_rich Low_complexity Low_complexity 1 23 0 775 341 54 60 chr5 25955017 25956173 -177129359 - L2 LINE L2 -4 3309 2152 653 135 0 0 chr5 25956461 25956557 -177128975 + AluJo SINE Alu 5 100 -212 826 214 50 5 chr5 25956681 25956882 -177128650 + AluJo SINE Alu 99 308 -4 592 346 59 30 chr5 25957146 25957748 -177127784 - L2 LINE L2 0 3313 2615 854 345 123 14 chr5 25957826 25958420 -177127112 + L2 LINE L2 1883 2541 -773 266 350 124 0 chr5 25958441 25958578 -177126954 - L2 LINE L2 -1729 1585 1432 530 175 42 0 chr5 25958837 25958957 -177126575 - MLT1D LTR MaLR -2 503 379 2382 144 3 0 chr5 25959117 25959478 -177126054 - THE1B LTR MaLR -2 362 1 332 362 51 7 chr5 25959603 25959741 -177125791 - MIR3 SINE MIR -21 187 44 22 0 0 0 chr5 25961020 25961042 -177124490 + AT_rich Low_complexity Low_complexity 1 22 0 976 303 3 18 chr5 25963022 25963349 -177122183 + ERVL LTR ERVL 4807 5128 -636 26 0 0 0 chr5 25963748 25963774 -177121758 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr5 25964436 25964456 -177121076 + (T)n Simple_repeat Simple_repeat 1 20 0 12102 128 16 54 chr5 25964759 25967632 -177117900 + L1P3 LINE L1 8 2875 -3586 845 81 81 0 chr5 25967632 25967755 -177117777 - LTR12 LTR ERV1 0 714 582 4233 118 82 69 chr5 25967756 25968570 -177116962 - LTR12 LTR ERV1 -1 825 1 692 278 0 48 chr5 25968756 25969029 -177116503 - pTR5 LTR ERV1 -1410 1028 769 5305 100 6 2 chr5 25969037 25969837 -177115695 + L1P LINE L1 2550 3352 -2794 2541 85 12 0 chr5 25969839 25970179 -177115353 + LTR14A LTR ERVK 1 344 0 22386 71 3 6 chr5 25970179 25972090 -177113442 + HERVK14 LTR ERVK 1 1900 -4045 5175 88 91 21 chr5 25972090 25972862 -177112670 - LTR12 LTR ERV1 0 826 1 22386 71 3 6 chr5 25972862 25973822 -177111710 + HERVK14 LTR ERVK 1900 2862 -3083 5621 66 83 8 chr5 25973812 25974584 -177110948 + HERVK14 LTR ERVK 4930 5759 -186 * 363 172 0 18 chr5 25974584 25974658 -177110874 + MER41C LTR ERV1 1 61 -493 757 71 18 35 chr5 25974659 25974772 -177110760 + HERVK14 LTR ERVK 5835 5945 0 2673 51 27 0 chr5 25974775 25975110 -177110422 + LTR14A LTR ERVK 1 344 0 3500 128 26 29 chr5 25975110 25975759 -177109773 + L1P LINE L1 3347 3993 -2153 7001 95 12 7 chr5 25975859 25976884 -177108648 - L1P LINE L1 -798 5348 4319 888 90 0 0 chr5 25976984 25977106 -177108426 + L1PA7 LINE L1 6032 6153 -1 22 0 0 0 chr5 25977143 25977165 -177108367 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 25977234 25977257 -177108275 + AT_rich Low_complexity Low_complexity 1 23 0 275 310 260 5 chr5 25977700 25977900 -177107632 + MIR SINE MIR 1 251 -11 272 188 14 0 chr5 25978379 25978448 -177107084 + T-rich Low_complexity Low_complexity 5 74 0 891 224 6 0 chr5 25978448 25978622 -177106910 - FAM SINE Alu 0 175 1 254 171 14 0 chr5 25978815 25978885 -177106647 + (CA)n Simple_repeat Simple_repeat 2 72 0 2085 113 17 0 chr5 25978893 25979184 -177106348 - AluSx SINE Alu -16 296 1 423 0 0 0 chr5 25979280 25979327 -177106205 + (TA)n Simple_repeat Simple_repeat 1 47 0 28 48 0 0 chr5 25980310 25980352 -177105180 + AT_rich Low_complexity Low_complexity 1 42 0 312 299 51 40 chr5 25980545 25980722 -177104810 + L1MDa LINE L1 2468 2646 -3894 536 297 100 34 chr5 25980838 25981158 -177104374 - L1ME3A LINE L1 -18 6152 5812 1079 263 128 37 chr5 25981180 25981641 -177103891 - MLT1F1 LTR MaLR -2 565 63 850 271 18 7 chr5 25981678 25981951 -177103581 - L1ME3A LINE L1 -372 5798 5523 275 238 0 12 chr5 25981999 25982083 -177103449 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 258 338 107 11 chr5 25982096 25982377 -177103155 - L1ME3A LINE L1 -1214 4932 4625 2305 220 62 37 chr5 25982666 25983261 -177102271 + MER90 LTR ERV1 4 613 -1 322 331 68 55 chr5 25984286 25984659 -177100873 + L2 LINE L2 1944 2326 -988 6443 76 8 5 chr5 25984659 25985529 -177100003 + L1PA7 LINE L1 5278 6150 -4 322 331 68 55 chr5 25985529 25985626 -177099906 + L2 LINE L2 2326 2420 -894 308 237 65 43 chr5 25986021 25986114 -177099418 - MLT1A2 LTR MaLR -275 99 5 2351 73 7 0 chr5 25986558 25986861 -177098671 + AluY SINE Alu 1 305 -6 370 262 78 43 chr5 25987782 25987923 -177097609 - MLT1L LTR MaLR -108 507 362 2472 66 3 0 chr5 25988277 25988581 -177096951 - AluY SINE Alu -6 305 1 331 85 51 0 chr5 25989453 25989512 -177096020 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 21 36 0 0 chr5 25990688 25990716 -177094816 + AT_rich Low_complexity Low_complexity 1 28 0 1235 184 24 14 chr5 25991948 25992236 -177093296 - L1MA4 LINE L1 -5 6295 6005 351 0 0 0 chr5 25992433 25992472 -177093060 + (TAA)n Simple_repeat Simple_repeat 1 39 0 25 0 0 0 chr5 25993978 25994003 -177091529 + AT_rich Low_complexity Low_complexity 1 25 0 37 39 0 0 chr5 25994093 25994144 -177091388 + AT_rich Low_complexity Low_complexity 1 51 0 191 36 36 0 chr5 25995025 25995053 -177090479 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 26 50 0 0 chr5 25995836 25995876 -177089656 + AT_rich Low_complexity Low_complexity 1 40 0 7104 52 3 0 chr5 25996224 25997294 -177088238 + L1PA5 LINE L1 5082 6154 0 2008 116 0 14 chr5 25997689 25997973 -177087559 - AluSx SINE Alu -31 281 2 686 204 120 22 chr5 25997973 25998198 -177087334 - L1MDb LINE L1 -5327 1216 970 435 139 0 0 chr5 25998209 25998288 -177087244 - L1MA7 LINE L1 -6 6285 6207 826 176 47 0 chr5 25998392 25998562 -177086970 - L1MA7 LINE L1 -130 6161 5984 877 296 4 15 chr5 25999184 25999448 -177086084 - L1MDb LINE L1 -6261 279 19 216 0 0 0 chr5 25999513 25999537 -177085995 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2200 98 0 3 chr5 25999539 25999825 -177085707 - AluSq SINE Alu -28 285 1 183 80 0 0 chr5 26000072 26000097 -177085435 + (TC)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr5 26000750 26000772 -177084760 + AT_rich Low_complexity Low_complexity 1 22 0 279 250 39 23 chr5 26001775 26001903 -177083629 + L1MEc LINE L1 484 613 -6212 553 299 48 30 chr5 26002359 26002794 -177082738 + L1MEc LINE L1 1268 1710 -4832 1326 277 69 35 chr5 26003359 26003804 -177081728 + L1M4c LINE L1 1072 1549 -4835 2426 87 0 0 chr5 26003804 26004114 -177081418 + AluY SINE Alu 1 310 -1 1326 277 69 35 chr5 26004114 26004351 -177081181 + L1M4c LINE L1 1549 1777 -4607 218 125 21 0 chr5 26004630 26004678 -177080854 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 31 26 0 0 chr5 26004847 26004885 -177080647 + AT_rich Low_complexity Low_complexity 1 38 0 515 343 103 44 chr5 26004959 26005347 -177080185 - L2 LINE L2 -2816 498 88 2017 119 0 57 chr5 26005665 26005983 -177079549 - AluSq SINE Alu -12 301 2 322 278 142 87 chr5 26006132 26006513 -177079019 - L1ME LINE L1 -462 5659 5258 407 243 90 0 chr5 26006599 26006710 -177078822 - MER3 DNA MER1_type -88 121 1 39 0 0 0 chr5 26007120 26007159 -177078373 + AT_rich Low_complexity Low_complexity 1 39 0 1929 119 16 3 chr5 26007282 26007594 -177077938 - L1MA1 LINE L1 0 6302 5987 827 203 0 21 chr5 26007594 26007781 -177077751 + L1M4c LINE L1 2560 2742 -3640 2539 55 0 0 chr5 26008981 26009289 -177076243 + AluY SINE Alu 1 308 -3 24 0 0 0 chr5 26009922 26009946 -177075586 + AT_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr5 26010063 26010087 -177075445 + (TAA)n Simple_repeat Simple_repeat 2 25 0 286 214 22 22 chr5 26010158 26010247 -177075285 - MER94 DNA DNA -21 113 25 326 319 21 7 chr5 26010260 26010404 -177075128 + L1MC4 LINE L1 6879 7024 -1018 1981 140 36 32 chr5 26010433 26010952 -177074580 + MLT2A2 LTR ERVL 1 421 -32 395 82 98 0 chr5 26011083 26011144 -177074388 + MLT2A2 LTR ERVL 387 453 0 389 269 92 56 chr5 26011150 26011510 -177074022 + L1MC5 LINE L1 7113 7485 -476 418 242 51 47 chr5 26011513 26011728 -177073804 + L1MC5 LINE L1 7631 7846 -115 26 0 0 0 chr5 26011756 26011782 -177073750 + AT_rich Low_complexity Low_complexity 1 26 0 770 297 22 0 chr5 26112687 26112919 -176972613 + MIR SINE MIR 5 241 -21 1115 232 140 29 chr5 26113241 26113590 -176971942 - L1MA9 LINE L1 -301 6011 5624 897 189 18 84 chr5 26113592 26113878 -176971654 + L1MA9 LINE L1 6008 6274 -38 53 90 0 0 chr5 26114680 26114824 -176970708 + AT_rich Low_complexity Low_complexity 1 144 0 32 43 0 0 chr5 26115354 26115400 -176970132 + AT_rich Low_complexity Low_complexity 1 46 0 1278 122 19 24 chr5 26116492 26116697 -176968835 - Charlie3 DNA MER1_type -4 2706 2503 * 1311 169 59 17 chr5 26116684 26116921 -176968611 - Charlie3 DNA MER1_type -2463 247 1 191 356 100 0 chr5 26117083 26117173 -176968359 + L2 LINE L2 3155 3253 -19 26 0 0 0 chr5 26117320 26117346 -176968186 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 26118258 26118286 -176967246 + AT_rich Low_complexity Low_complexity 1 28 0 9708 197 55 36 chr5 26119210 26120041 -176965491 + L1MB3 LINE L1 18 832 -5552 180 0 0 0 chr5 26120041 26120061 -176965471 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9708 197 55 36 chr5 26120061 26121611 -176963921 + L1MB3 LINE L1 832 2444 -3940 980 9 0 0 chr5 26121696 26121809 -176963723 + AluYa5/8 SINE Alu 199 311 0 6339 246 37 19 chr5 26121809 26123600 -176961932 + L1MB3 LINE L1 2667 4503 -1879 255 61 0 0 chr5 26123600 26123633 -176961899 + (CA)n Simple_repeat Simple_repeat 2 34 0 6339 246 37 19 chr5 26123633 26123941 -176961591 + L1MB3 LINE L1 4503 4804 -1578 2390 195 76 52 chr5 26123955 26124114 -176961418 + L1MB3 LINE L1 5073 5227 -1192 2239 110 0 0 chr5 26124114 26124423 -176961109 - AluSc SINE Alu 0 309 1 2390 195 76 52 chr5 26124423 26125257 -176960275 + L1MB3 LINE L1 5227 6084 -335 553 100 0 0 chr5 26125299 26125379 -176960153 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr5 26125408 26125429 -176960103 + AT_rich Low_complexity Low_complexity 1 21 0 390 214 26 146 chr5 26125841 26126033 -176959499 + LTR16A1 LTR ERVL 284 452 -5 281 264 96 60 chr5 26126136 26126303 -176959229 - MLT1J LTR MaLR 0 511 339 381 329 53 12 chr5 26126357 26126600 -176958932 - MLT1J LTR MaLR -258 253 1 21 71 0 0 chr5 26126734 26126776 -176958756 + AT_rich Low_complexity Low_complexity 1 42 0 225 402 8 17 chr5 26127281 26127398 -176958134 + L2 LINE L2 3153 3268 -4 230 157 0 59 chr5 26127790 26127841 -176957691 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 27 49 0 0 chr5 26128631 26128672 -176956860 + AT_rich Low_complexity Low_complexity 1 41 0 1778 160 38 0 chr5 26128972 26129260 -176956272 + AluSq SINE Alu 2 300 -13 26 0 0 0 chr5 26129311 26129337 -176956195 + AT_rich Low_complexity Low_complexity 1 26 0 26 82 0 0 chr5 26129451 26129512 -176956020 + AT_rich Low_complexity Low_complexity 1 61 0 3821 194 30 86 chr5 26130735 26131780 -176953752 + L1MC1 LINE L1 75 1060 -5366 3504 232 63 51 chr5 26131765 26134205 -176951327 + L1MC1 LINE L1 1367 3836 -2590 * 4248 244 73 40 chr5 26134194 26135407 -176950125 + L1MC1 LINE L1 4341 5668 -945 2124 82 0 4 chr5 26135407 26135736 -176949796 + AluSc SINE Alu 2 329 0 4248 244 73 40 chr5 26135736 26136716 -176948816 + L1MC1 LINE L1 5668 6613 0 1962 150 0 0 chr5 26136764 26137051 -176948481 + AluSg SINE Alu 1 287 -23 290 141 0 16 chr5 26137051 26137115 -176948417 + (TA)n Simple_repeat Simple_repeat 2 64 0 32 81 0 0 chr5 26138160 26138234 -176947298 + AT_rich Low_complexity Low_complexity 1 74 0 2085 124 28 0 chr5 26138518 26138808 -176946724 - AluSq SINE Alu -15 298 1 33 0 0 0 chr5 26139981 26140014 -176945518 + AT_rich Low_complexity Low_complexity 1 33 0 265 286 22 11 chr5 26140419 26140510 -176945022 - MLT1J2 LTR MaLR -290 160 69 21 67 0 17 chr5 26140922 26140951 -176944581 + AT_rich Low_complexity Low_complexity 1 29 -30 5373 140 14 3 chr5 26140951 26141977 -176943555 + L1PA16 LINE L1 5128 6164 -2 21 67 0 17 chr5 26141977 26142007 -176943525 + AT_rich Low_complexity Low_complexity 29 59 0 7195 179 56 9 chr5 26142306 26143678 -176941854 + Tigger4(Zombi) DNA MER2_type 13 1448 -1283 263 188 0 0 chr5 26143675 26143723 -176941809 - Tigger4(Zombi) DNA MER2_type -1389 1342 1295 * 2954 156 27 7 chr5 26143720 26144742 -176940790 + Tigger4(Zombi) DNA MER2_type 1638 2729 -2 318 333 81 21 chr5 26144940 26145126 -176940406 + L1ME4a LINE L1 5687 5883 -238 634 321 67 8 chr5 26145148 26145388 -176940144 - MIR SINE MIR -4 258 5 240 200 0 0 chr5 26145412 26145457 -176940075 + L1MC4 LINE L1 6658 6702 -1340 225 284 23 11 chr5 26145460 26145548 -176939984 - L1MC4 LINE L1 -1339 6703 6615 33 94 0 0 chr5 26145578 26145674 -176939858 + AT_rich Low_complexity Low_complexity 1 96 0 1910 145 10 3 chr5 26146582 26146892 -176938640 - AluSx SINE Alu 0 312 1 422 138 0 0 chr5 26146992 26147072 -176938460 - L1MA3 LINE L1 0 6305 6226 23 54 0 0 chr5 26147253 26147290 -176938242 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 26147407 26147437 -176938095 + AT_rich Low_complexity Low_complexity 1 30 0 197 293 41 57 chr5 26147551 26147674 -176937858 + L2 LINE L2 2584 2704 -610 845 156 0 0 chr5 26147733 26147861 -176937671 - FLAM_C SINE Alu -14 129 2 23 0 0 0 chr5 26147941 26147964 -176937568 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 26148320 26148348 -176937184 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 26148804 26148831 -176936701 + AT_rich Low_complexity Low_complexity 1 27 0 422 300 25 8 chr5 26149192 26149312 -176936220 + MIR SINE MIR 30 151 -111 27 29 0 0 chr5 26151322 26151356 -176934176 + AT_rich Low_complexity Low_complexity 1 34 0 326 338 25 13 chr5 26151473 26151630 -176933902 - L2 LINE L2 0 3313 3155 285 253 63 0 chr5 26152182 26152277 -176933255 + MER52A LTR ERV1 1 101 -1654 4197 199 53 10 chr5 26152790 26154144 -176931388 + MER52A LTR ERV1 281 1755 0 3566 157 98 5 chr5 26154600 26155250 -176930282 + MER50 LTR ERV1 1 711 -23 3217 174 69 35 chr5 26156825 26157401 -176928131 - L1MA9 LINE L1 0 6312 5704 369 0 0 0 chr5 26157401 26157442 -176928090 + (TA)n Simple_repeat Simple_repeat 2 42 0 3217 174 69 35 chr5 26157442 26157602 -176927930 - L1MA9 LINE L1 -608 5704 5551 2772 100 24 40 chr5 26158325 26158776 -176926756 - MLT2A1 LTR ERVL 0 444 1 10604 92 5 5 chr5 26158776 26160227 -176925305 - HERVL-A1 LTR ERVL 0 5654 4204 8332 79 1 7 chr5 26160211 26161301 -176924231 - HERVL LTR ERVL -2766 2888 1806 * 336 122 0 0 chr5 26161311 26161360 -176924172 + HERVL LTR ERVL 3136 3184 -2470 1415 100 48 13 chr5 26161382 26161611 -176923921 - MLT2A1 LTR ERVL -207 237 1 578 14 14 0 chr5 26161740 26161811 -176923721 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 3059 43 0 0 chr5 26161970 26162339 -176923193 - L1PA3 LINE L1 0 6155 5787 671 275 45 35 chr5 26163690 26163977 -176921555 + MER67C LTR ERV1 1 290 -420 22 0 0 0 chr5 26165647 26165669 -176919863 + AT_rich Low_complexity Low_complexity 1 22 0 1452 193 119 59 chr5 26165820 26166224 -176919308 - MSTA LTR MaLR 0 428 1 1442 188 76 0 chr5 26167024 26167338 -176918194 + MER44D DNA MER2_type 1 608 -1 1049 144 17 0 chr5 26167392 26167566 -176917966 - L1PA15 LINE L1 -3 6162 5986 2640 108 8 0 chr5 26167580 26168001 -176917531 - L1PA15 LINE L1 -324 5832 5404 27 0 0 0 chr5 26168802 26168829 -176916703 + AT_rich Low_complexity Low_complexity 1 27 0 11548 186 31 30 chr5 26169506 26173142 -176912390 - L1MA8 LINE L1 0 6291 2657 1332 251 56 10 chr5 26174796 26175207 -176910325 - MER99 DNA DNA -44 784 355 990 240 65 14 chr5 26175233 26175508 -176910024 - MER99 DNA DNA -534 294 6 435 328 57 33 chr5 26176423 26176667 -176908865 - MERVL LTR ERVL -4635 1129 880 2376 201 6 46 chr5 26176678 26176957 -176908575 + MLT1D LTR MaLR 6 256 -249 2158 135 0 0 chr5 26176957 26177269 -176908263 + AluSx SINE Alu 1 312 0 2376 201 6 46 chr5 26177269 26177507 -176908025 + MLT1D LTR MaLR 256 502 -3 739 228 6 25 chr5 26178003 26178165 -176907367 - FRAM SINE Alu -17 159 1 1815 158 46 12 chr5 26178595 26178923 -176906609 + THE1C LTR MaLR 1 339 -36 1977 141 30 22 chr5 26178923 26179284 -176906248 + THE1B LTR MaLR 1 364 0 7027 113 8 16 chr5 26179284 26180319 -176905213 + THE1B-int LTR MaLR 1 1027 -553 832 145 0 0 chr5 26180318 26180449 -176905083 - THE1-int LTR MaLR -411 1169 1039 * 1778 170 13 19 chr5 26180449 26180766 -176904766 + THE1B LTR MaLR 50 364 0 231 184 0 0 chr5 26180768 26180806 -176904726 + THE1C LTR MaLR 391 428 0 * 771 309 63 53 chr5 26180806 26181184 -176904348 - MLT2F LTR ERVL -165 498 117 26 50 0 0 chr5 26181955 26181995 -176903537 + AT_rich Low_complexity Low_complexity 1 40 0 22 56 0 0 chr5 26182018 26182054 -176903478 + AT_rich Low_complexity Low_complexity 1 36 0 371 320 35 59 chr5 26182836 26183039 -176902493 - LTR16A1 LTR ERVL -259 198 1 427 315 29 34 chr5 26184044 26184282 -176901250 - MERVL LTR ERVL -3145 2340 2104 1550 206 41 39 chr5 26184374 26184763 -176900769 + MLT1B LTR MaLR 1 390 0 301 235 81 101 chr5 26184879 26185028 -176900504 + LTR16A LTR ERVL 305 450 0 718 311 117 20 chr5 26185117 26185519 -176900013 - LTR16A1 LTR ERVL 0 457 17 22 0 0 0 chr5 26185807 26185829 -176899703 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 26186086 26186111 -176899421 + AT_rich Low_complexity Low_complexity 1 25 0 2105 138 23 0 chr5 26186161 26186629 -176898903 - L1PA16 LINE L1 -566 5600 5124 * 2501 180 24 3 chr5 26186627 26187154 -176898378 + L1PA16 LINE L1 5600 6153 -2 24 32 0 0 chr5 26187303 26187334 -176898198 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 26187782 26187803 -176897729 + AT_rich Low_complexity Low_complexity 1 21 0 388 329 90 8 chr5 26187831 26188065 -176897467 + L1ME4a LINE L1 5691 5943 -178 23 0 0 0 chr5 26188219 26188242 -176897290 + AT_rich Low_complexity Low_complexity 1 23 0 565 324 180 32 chr5 26188698 26189427 -176896105 + L2 LINE L2 1783 2619 -695 1501 43 0 0 chr5 26189597 26189782 -176895750 + L1PA5 LINE L1 5966 6150 -4 181 284 40 27 chr5 26189864 26189938 -176895594 + L2 LINE L2 2891 2965 -349 1817 134 31 0 chr5 26189942 26190232 -176895300 - AluSx SINE Alu -8 304 6 29 47 0 0 chr5 26190394 26190437 -176895095 + AT_rich Low_complexity Low_complexity 1 43 0 235 368 25 37 chr5 26192058 26192221 -176893311 + MIR3 SINE MIR 30 190 -18 2036 109 7 0 chr5 26193038 26193350 -176892182 - AluSx SINE Alu 0 314 1 31 0 0 0 chr5 26193488 26193519 -176892013 + AT_rich Low_complexity Low_complexity 1 31 0 24 67 0 0 chr5 26194984 26195029 -176890503 + AT_rich Low_complexity Low_complexity 1 45 0 865 325 50 37 chr5 26195398 26196152 -176889380 - L1ME3A LINE L1 -114 6056 5293 278 49 0 24 chr5 26196166 26196207 -176889325 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 5526 223 56 21 chr5 26196207 26197901 -176887631 - L1PA3 LINE L1 -24 6131 4283 2282 80 10 16 chr5 26197901 26198212 -176887320 - AluY SINE Alu -2 309 1 5526 223 56 21 chr5 26198212 26198882 -176886650 - L1PA3 LINE L1 -1872 4283 3638 31 76 0 0 chr5 26199194 26199260 -176886272 + AT_rich Low_complexity Low_complexity 1 66 0 447 324 125 0 chr5 26199273 26199569 -176885963 - L1ME3A LINE L1 -1802 4344 4012 329 300 112 52 chr5 26199815 26200242 -176885290 - L1ME3A LINE L1 -2812 3334 2882 512 257 58 18 chr5 26200247 26200473 -176885059 - L1ME3A LINE L1 -3234 2912 2678 1200 274 35 44 chr5 26200576 26201010 -176884522 + LTR40a LTR ERVL 1 430 -89 269 208 129 34 chr5 26201048 26201226 -176884306 - L1ME3A LINE L1 -3577 2569 2375 22 56 0 0 chr5 26201554 26201590 -176883942 + AT_rich Low_complexity Low_complexity 1 36 0 558 242 7 0 chr5 26201592 26201745 -176883787 - L1MA10 LINE L1 -4 6330 6177 1433 258 58 7 chr5 26201817 26202362 -176883170 - L1MD2 LINE L1 -429 5737 5345 606 141 13 39 chr5 26202391 26202547 -176882985 + CT-rich Low_complexity Low_complexity 4 155 0 633 169 7 14 chr5 26202647 26202795 -176882737 + CT-rich Low_complexity Low_complexity 3 149 0 1313 216 34 3 chr5 26202797 26203088 -176882444 - AluJo SINE Alu -12 300 1 401 272 26 26 chr5 26203159 26203350 -176882182 - L1MD2 LINE L1 -1120 5026 4836 303 259 62 89 chr5 26203360 26203584 -176881948 + L1ME4a LINE L1 5799 6016 -105 22 56 0 0 chr5 26203642 26203678 -176881854 + AT_rich Low_complexity Low_complexity 1 36 0 231 61 0 0 chr5 26203752 26203785 -176881747 + (T)n Simple_repeat Simple_repeat 1 33 0 289 298 111 0 chr5 26204396 26204604 -176880928 + L1MDa LINE L1 1674 1904 -4636 246 208 83 0 chr5 26205079 26205151 -176880381 + MLT1J LTR MaLR 404 481 -30 2140 122 7 0 chr5 26205324 26205627 -176879905 - AluY SINE Alu -6 305 1 227 299 58 80 chr5 26206110 26206334 -176879198 + L1MEd LINE L1 995 1213 -4906 616 175 54 19 chr5 26206427 26206584 -176878948 + L1MA8 LINE L1 5954 6130 -161 6009 59 1 0 chr5 26207827 26208585 -176876947 + L1PA7 LINE L1 5392 6150 -4 21 0 0 0 chr5 26208682 26208703 -176876829 + AT_rich Low_complexity Low_complexity 1 21 0 466 262 21 35 chr5 26208725 26208743 -176876789 - MLT1C LTR MaLR -263 204 187 1798 155 7 10 chr5 26208743 26209053 -176876479 - AluSx SINE Alu -3 309 1 466 262 21 35 chr5 26209053 26209179 -176876353 - MLT1C LTR MaLR -280 187 62 23 0 0 0 chr5 26211330 26211353 -176874179 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 26211706 26211738 -176873794 + AT_rich Low_complexity Low_complexity 1 32 0 378 134 60 0 chr5 26211959 26212026 -176873506 - L1MA3 LINE L1 -342 5963 5893 2007 166 6 11 chr5 26212027 26212383 -176873149 + L1P LINE L1 3882 4235 -1911 330 299 40 62 chr5 26212936 26213160 -176872372 - L1M4 LINE L1 -1899 4247 4029 21 0 0 0 chr5 26213176 26213197 -176872335 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 26213494 26213516 -176872016 + (TC)n Simple_repeat Simple_repeat 2 23 0 452 277 43 28 chr5 26213531 26213672 -176871860 - LTR27 LTR ERV1 0 636 494 2281 185 129 13 chr5 26213676 26214234 -176871298 - LTR28 LTR ERV1 -444 576 1 23 0 0 0 chr5 26214966 26214989 -176870543 + AT_rich Low_complexity Low_complexity 1 23 0 1862 157 0 20 chr5 26215051 26215351 -176870181 - AluSx SINE Alu -16 296 3 27 49 0 0 chr5 26216770 26216811 -176868721 + AT_rich Low_complexity Low_complexity 1 41 0 189 281 0 56 chr5 26218831 26218920 -176866612 - L2 LINE L2 -214 3099 3016 4245 107 6 2 chr5 26219257 26219881 -176865651 - L1PA13 LINE L1 0 6163 5537 226 209 0 0 chr5 26221138 26221181 -176864351 + GA-rich Low_complexity Low_complexity 2 44 0 514 135 10 19 chr5 26221486 26221590 -176863942 + L1MA9 LINE L1 6191 6293 -19 21 36 0 0 chr5 26221590 26221618 -176863914 + AT_rich Low_complexity Low_complexity 1 28 0 679 200 18 5 chr5 26221658 26221817 -176863715 + L1MA8 LINE L1 6131 6298 -2 1340 239 18 34 chr5 26223241 26223621 -176861911 - MLT1A2 LTR MaLR 0 374 1 282 295 50 43 chr5 26224568 26224707 -176860825 - MIR SINE MIR -50 212 73 259 17 17 83 chr5 26224953 26225013 -176860519 + (TAA)n Simple_repeat Simple_repeat 3 58 0 2276 96 3 0 chr5 26225016 26225319 -176860213 - AluY SINE Alu -7 304 1 299 330 0 9 chr5 26225350 26225378 -176860154 + CT-rich Low_complexity Low_complexity 3 30 -77 2045 130 7 0 chr5 26225378 26225671 -176859861 - AluSc SINE Alu -14 295 1 299 330 0 9 chr5 26225671 26225748 -176859784 + CT-rich Low_complexity Low_complexity 30 107 0 3044 171 8 64 chr5 26226309 26226964 -176858568 - LTR35 LTR ERV1 0 618 1 1907 157 7 0 chr5 26226990 26227312 -176858220 - AluSx SINE Alu 0 324 1 334 145 0 16 chr5 26227654 26227716 -176857816 - LTR35-int LTR ERV1 -277 6054 5994 8261 193 58 71 chr5 26227796 26228983 -176856549 - MER57-int LTR ERV1 -437 5421 4400 2125 168 100 72 chr5 26228983 26229555 -176855977 - LTR4 LTR ERV1 0 588 1 8261 193 58 71 chr5 26229555 26230907 -176854625 - MER57-int LTR ERV1 -1458 4400 3031 2862 208 55 23 chr5 26230907 26230964 -176854568 + LTR58 LTR ERV1 1 55 -624 2198 181 15 0 chr5 26230964 26231361 -176854171 + MER57A LTR ERV1 1 403 0 2862 208 55 23 chr5 26231361 26231958 -176853574 + LTR58 LTR ERV1 55 676 -3 1121 150 8 69 chr5 26232030 26232290 -176853242 - MER57-int LTR ERV1 -2945 3001 2758 6306 179 6 62 chr5 26232340 26233660 -176851872 - MER57-int LTR ERV1 -3838 2108 863 350 284 78 50 chr5 26234019 26234237 -176851295 - MER57-int LTR ERV1 -6247 1290 1067 3428 159 6 54 chr5 26234256 26234781 -176850751 - LTR35 LTR ERV1 0 618 128 3487 137 73 2 chr5 26234781 26235372 -176850160 + MER41B LTR ERV1 3 635 0 3428 159 6 54 chr5 26235372 26235495 -176850037 - LTR35 LTR ERV1 -490 128 1 186 212 0 0 chr5 26236240 26236273 -176849259 - MER5B DNA MER1_type -145 33 1 1136 184 11 0 chr5 26236277 26236467 -176849065 - LTR1 LTR ERV1 0 785 594 5850 132 182 84 chr5 26236467 26238008 -176847524 + pTR5 LTR ERV1 747 2438 0 2756 133 52 68 chr5 26238018 26238590 -176846942 - LTR1 LTR ERV1 -191 594 32 22 0 0 0 chr5 26239055 26239077 -176846455 + AT_rich Low_complexity Low_complexity 1 22 0 528 212 97 88 chr5 26239214 26239597 -176845935 + LTR35 LTR ERV1 196 556 0 * 565 240 0 0 chr5 26239597 26239699 -176845833 + MER58B DNA MER1_type 240 341 0 497 274 96 0 chr5 26240051 26240197 -176845335 + MER68 LTR ERV1 55 214 -348 42059 32 25 4 chr5 26240244 26246269 -176839263 - L1PA3 LINE L1 -1 6154 2 610 303 51 37 chr5 26246281 26246575 -176838957 + MER68 LTR ERV1 261 558 -4 262 240 0 0 chr5 26248129 26248179 -176837353 + MLT2F LTR ERVL 2 51 -612 1033 248 72 30 chr5 26248240 26248584 -176836948 - MLT1A1 LTR MaLR 0 428 19 305 121 0 69 chr5 26248641 26248699 -176836833 + MLT1E1 LTR MaLR 193 246 -408 22 35 0 0 chr5 26248773 26248802 -176836730 + AT_rich Low_complexity Low_complexity 1 29 0 2169 117 0 0 chr5 26248926 26249242 -176836290 + AluSx SINE Alu 1 316 0 2068 107 21 0 chr5 26249457 26249748 -176835784 - AluSp SINE Alu -16 297 1 771 198 86 26 chr5 26251043 26251158 -176834374 + L1MD3 LINE L1 7732 7839 -156 231 103 0 0 chr5 26251158 26251197 -176834335 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 771 198 86 26 chr5 26251197 26251313 -176834219 + L1MD3 LINE L1 7839 7977 -18 307 330 105 38 chr5 26251315 26251582 -176833950 - L3 LINE CR1 -164 1413 1129 1088 201 85 63 chr5 26251943 26252321 -176833211 - MLT1B LTR MaLR -4 386 1 1753 241 21 17 chr5 26252321 26252741 -176832791 - MLT1B-int LTR MaLR 0 1735 1314 294 281 22 0 chr5 26252828 26252917 -176832615 - MLT1B-int LTR MaLR -969 766 676 1949 232 4 24 chr5 26253059 26253528 -176832004 - MLT1B-int LTR MaLR -649 722 263 664 117 9 9 chr5 26253522 26253633 -176831899 - MLT1B-int LTR MaLR -1620 115 5 * 696 253 152 86 chr5 26253638 26253839 -176831693 - MLT2B1 LTR ERVL -1 519 333 2459 63 0 0 chr5 26253839 26254141 -176831391 - AluY SINE Alu -9 302 1 696 253 152 86 chr5 26254141 26254426 -176831106 - MLT2B1 LTR ERVL -187 333 1 750 324 87 35 chr5 26255396 26256245 -176829287 - L1MEd LINE L1 -4549 1580 682 23 33 0 0 chr5 26256340 26256370 -176829162 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 26256780 26256802 -176828730 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 26256829 26256853 -176828679 + AT_rich Low_complexity Low_complexity 1 24 0 304 314 160 24 chr5 26256854 26257230 -176828302 - L1 LINE L1 -2830 3316 2890 1595 219 76 3 chr5 26257401 26257770 -176827762 - MSTD LTR MaLR 0 396 1 2338 169 5 28 chr5 26257946 26258383 -176827149 - Tigger2a DNA MER2_type -7 427 1 1711 173 133 13 chr5 26258529 26258911 -176826621 - MSTA LTR MaLR 0 428 1 782 252 50 90 chr5 26258982 26259383 -176826149 + MLT1B LTR MaLR 1 385 -5 817 189 17 63 chr5 26259414 26259589 -176825943 + FAM SINE Alu 1 167 -8 202 235 0 51 chr5 26259749 26259847 -176825685 + A-rich Low_complexity Low_complexity 5 97 0 1309 226 82 15 chr5 26261614 26261954 -176823578 + MLT1A1 LTR MaLR 1 363 -2 1396 177 157 20 chr5 26262756 26263100 -176822432 + MSTB LTR MaLR 1 391 -35 7749 98 12 5 chr5 26263371 26265338 -176820194 + L1PA7 LINE L1 4145 6146 -8 450 0 0 0 chr5 26265342 26265392 -176820140 + (GAA)n Simple_repeat Simple_repeat 2 51 0 24 0 0 0 chr5 26265394 26265418 -176820114 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 26266105 26266129 -176819403 + AT_rich Low_complexity Low_complexity 1 24 0 268 196 11 63 chr5 26267216 26267405 -176818127 + (TA)n Simple_repeat Simple_repeat 1 179 0 192 255 20 0 chr5 26267619 26267670 -176817862 - MIR SINE MIR -55 207 156 26 50 0 0 chr5 26269164 26269204 -176816328 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr5 26269809 26269837 -176815695 + AT_rich Low_complexity Low_complexity 1 28 0 35 41 0 0 chr5 26270255 26270304 -176815228 + AT_rich Low_complexity Low_complexity 1 49 0 45 19 0 0 chr5 26272664 26272716 -176812816 + AT_rich Low_complexity Low_complexity 1 52 0 1551 126 7 96 chr5 26274338 26274640 -176810892 + AluSx SINE Alu 1 275 -37 29 0 0 0 chr5 26274650 26274679 -176810853 + AT_rich Low_complexity Low_complexity 1 29 0 1918 143 52 25 chr5 26275485 26275850 -176809682 + THE1C LTR MaLR 1 375 0 2943 28 11 16 chr5 26277577 26277963 -176807569 - L1PA4 LINE L1 0 6155 5794 1943 142 11 0 chr5 26277965 26278247 -176807285 - AluSq SINE Alu -28 285 1 235 257 73 92 chr5 26278845 26279063 -176806469 + L2 LINE L2 3100 3313 0 21 0 0 0 chr5 26279873 26279894 -176805638 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr5 26279973 26280019 -176805513 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1742 259 33 55 chr5 26280051 26280629 -176804903 - MLT1E2 LTR MaLR -25 601 37 285 135 0 0 chr5 26280629 26280681 -176804851 + (TG)n Simple_repeat Simple_repeat 2 53 0 186 300 20 0 chr5 26281153 26281203 -176804329 + L2 LINE L2 3179 3229 -84 20548 202 38 10 chr5 26281220 26281833 -176803699 - L1MA3 LINE L1 0 7724 7130 1493 102 0 23 chr5 26281833 26282049 -176803483 - AluSq SINE Alu -5 308 98 20548 202 38 10 chr5 26282049 26284381 -176801151 - L1MA3 LINE L1 -594 7130 4864 189 0 0 0 chr5 26284381 26284402 -176801130 + (TTA)n Simple_repeat Simple_repeat 2 22 0 20548 202 38 10 chr5 26284402 26284665 -176800867 - L1MA3 LINE L1 -2860 4864 4610 2224 114 0 3 chr5 26284665 26284963 -176800569 - AluSx SINE Alu -15 297 1 20548 202 38 10 chr5 26284963 26285610 -176799922 - L1MA3 LINE L1 -3114 4610 3982 2107 138 0 0 chr5 26285610 26285908 -176799624 - AluSc SINE Alu -11 298 1 20548 202 38 10 chr5 26285908 26286966 -176798566 - L1MA3 LINE L1 -3742 3982 2955 2566 65 0 0 chr5 26286966 26287272 -176798260 - AluY SINE Alu -5 306 1 20548 202 38 10 chr5 26287272 26288357 -176797175 - L1MA3 LINE L1 -4769 2955 1902 414 0 0 0 chr5 26288357 26288403 -176797129 + (TTA)n Simple_repeat Simple_repeat 2 47 0 20548 202 38 10 chr5 26288403 26289798 -176795734 - L1MA3 LINE L1 -5822 1902 30 421 287 51 72 chr5 26289863 26290100 -176795432 - HERVL74 LTR ERVL -4780 905 674 405 322 110 49 chr5 26290121 26290550 -176794982 - L1 LINE L1 -808 5338 4884 237 234 47 16 chr5 26290781 26290845 -176794687 - MIR SINE MIR -64 144 79 1494 314 87 50 chr5 26291148 26292043 -176793489 - HERVL74 LTR ERVL -4755 930 3 1795 221 13 66 chr5 26292060 26292530 -176793002 - MER74C LTR ERVL -12 448 4 548 246 7 7 chr5 26292534 26292676 -176792856 - L1MA10 LINE L1 -14 6320 6179 506 333 56 0 chr5 26293616 26293811 -176791721 - L1MC/D LINE L1 -2144 5664 5459 5212 41 2 2 chr5 26293813 26294445 -176791087 + L1PA5 LINE L1 5515 6146 -8 358 267 9 9 chr5 26294466 26294571 -176790961 + ERVL LTR ERVL 1755 1859 -3905 2675 302 46 48 chr5 26294696 26295958 -176789574 + ERVL LTR ERVL 2054 3317 -2447 5638 37 0 3 chr5 26295958 26296635 -176788897 - L1PA3 LINE L1 -3 6152 5478 2675 302 46 48 chr5 26296635 26296708 -176788824 + ERVL LTR ERVL 3317 3389 -2375 1786 216 58 58 chr5 26296708 26296958 -176788574 + MLT1D LTR MaLR 1 250 -255 2141 134 0 3 chr5 26296958 26297271 -176788261 + AluSq SINE Alu 1 312 -1 186 43 0 0 chr5 26297271 26297294 -176788238 + (GA)n Simple_repeat Simple_repeat 2 24 0 1786 216 58 58 chr5 26297294 26297546 -176787986 + MLT1D LTR MaLR 248 504 -1 2675 302 46 48 chr5 26297546 26297620 -176787912 + ERVL LTR ERVL 3389 3461 -2303 186 143 0 0 chr5 26297635 26297670 -176787862 + (TA)n Simple_repeat Simple_repeat 1 35 0 702 331 18 6 chr5 26298178 26298509 -176787023 + ERVL LTR ERVL 3953 4296 -1190 268 279 33 49 chr5 26298572 26298694 -176786838 + ERVL LTR ERVL 4438 4557 -928 364 359 57 26 chr5 26298796 26299253 -176786279 + ERVL LTR ERVL 4724 5194 -570 226 315 136 19 chr5 26299874 26300087 -176785445 + LTR33 LTR ERVL 284 521 0 42 73 0 24 chr5 26302356 26302480 -176783052 + AT_rich Low_complexity Low_complexity 1 121 0 2062 130 36 0 chr5 26302724 26303025 -176782507 + AluSx SINE Alu 1 312 0 907 170 64 148 chr5 26304088 26304418 -176781114 - AluJb SINE Alu 0 302 1 542 308 75 48 chr5 26304522 26304960 -176780572 + L1ME3 LINE L1 5258 5707 -455 391 253 25 0 chr5 26305043 26305118 -176780414 - Tigger3b DNA MER2_type 0 1232 1156 6536 214 135 14 chr5 26305118 26306682 -176778850 + MER52A LTR ERV1 3 1755 0 5684 163 60 12 chr5 26306685 26307791 -176777741 - Tigger3b DNA MER2_type -72 1159 1 1831 164 0 0 chr5 26308120 26308395 -176777137 - AluSx SINE Alu -37 275 1 1555 280 51 17 chr5 26308405 26309580 -176775952 + L1ME1 LINE L1 2058 3235 -2980 1068 271 96 11 chr5 26309552 26310199 -176775333 + L1ME1 LINE L1 5176 5879 -356 * 423 274 28 65 chr5 26310255 26310503 -176775029 + L1ME1 LINE L1 5982 6220 -15 2315 148 14 5 chr5 26310668 26311039 -176774493 - THE1C LTR MaLR 0 375 2 9367 142 40 7 chr5 26311040 26312569 -176772963 - THE1C-int LTR MaLR 0 1580 2 2172 159 19 5 chr5 26312570 26312940 -176772592 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 26313432 26313453 -176772079 + AT_rich Low_complexity Low_complexity 1 21 0 659 311 53 6 chr5 26313611 26313722 -176771810 + L1ME3 LINE L1 5706 5810 -352 258 32 0 0 chr5 26313722 26313753 -176771779 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 659 311 53 6 chr5 26313753 26313963 -176771569 + L1ME3 LINE L1 5810 6042 -120 270 334 30 25 chr5 26314490 26314855 -176770677 + L1M4 LINE L1 4621 4987 -1159 405 300 72 22 chr5 26314941 26315164 -176770368 + L1M4 LINE L1 5123 5356 -790 22 0 0 0 chr5 26315480 26315502 -176770030 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 26316506 26316527 -176769005 + AT_rich Low_complexity Low_complexity 1 21 0 598 263 74 29 chr5 26316969 26317212 -176768320 - L1MCa LINE L1 -4846 1580 1327 2960 120 20 2 chr5 26317433 26317876 -176767656 + MLT2A2 LTR ERVL 1 451 -2 35000 108 10 8 chr5 26317879 26323588 -176761944 + ERVL-A2 LTR ERVL 2 5654 0 2786 117 25 0 chr5 26323588 26323991 -176761541 + MLT2A2 LTR ERVL 1 413 -40 225 186 0 0 chr5 26323999 26324069 -176761463 + (TA)n Simple_repeat Simple_repeat 2 71 0 259 98 106 0 chr5 26324148 26324280 -176761252 + (TA)n Simple_repeat Simple_repeat 1 146 0 289 135 58 0 chr5 26324286 26324338 -176761194 + MLT2A2 LTR ERVL 390 444 0 409 283 22 36 chr5 26324341 26324564 -176760968 - L1MDa LINE L1 -3302 3080 2861 24 32 0 0 chr5 26324587 26324618 -176760914 + AT_rich Low_complexity Low_complexity 1 31 0 336 134 25 168 chr5 26324775 26324894 -176760638 - L1ME LINE L1 -449 5721 5620 7462 36 3 0 chr5 26324907 26325959 -176759573 - L1PA4 LINE L1 -3 6152 5100 290 292 67 11 chr5 26326033 26326211 -176759321 - L1MDa LINE L1 -3611 2771 2584 511 300 100 30 chr5 26327398 26327768 -176757764 - L1MDa LINE L1 -4447 1935 1540 1171 236 134 52 chr5 26327782 26328243 -176757289 + MLT1D LTR MaLR 1 499 -6 238 299 76 25 chr5 26328245 26328402 -176757130 - L1MDa LINE L1 -4955 1429 1265 305 329 102 27 chr5 26328479 26328850 -176756682 - L1MDa LINE L1 -5212 1351 953 2019 182 26 44 chr5 26329507 26329935 -176755597 + MSTB LTR MaLR 5 424 -2 696 270 15 20 chr5 26332201 26332401 -176753131 + MER3 DNA MER1_type 11 209 0 290 282 77 0 chr5 26333138 26333255 -176752277 - L1ME4a LINE L1 -2 6119 5994 301 330 30 46 chr5 26333313 26333510 -176752022 + L2 LINE L2 1777 1970 -1344 1966 158 135 5 chr5 26333758 26334137 -176751395 + MSTA LTR MaLR 1 428 0 487 267 103 6 chr5 26334793 26334958 -176750574 - MER5A DNA MER1_type -6 183 3 1126 178 0 35 chr5 26335185 26335387 -176750145 - MER1B DNA MER1_type -102 195 1 388 359 67 24 chr5 26335699 26335997 -176749535 - L1ME4a LINE L1 -303 5818 5508 221 163 20 0 chr5 26336214 26336263 -176749269 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 220 163 31 51 chr5 26337716 26337814 -176747718 + (TA)n Simple_repeat Simple_repeat 1 96 0 275 118 11 43 chr5 26337818 26337911 -176747621 + (TTA)n Simple_repeat Simple_repeat 3 92 0 352 124 38 97 chr5 26337925 26338110 -176747422 + (TTATA)n Simple_repeat Simple_repeat 4 177 0 388 164 51 34 chr5 26338170 26338347 -176747185 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 71 0 0 chr5 26338374 26338430 -176747102 + AT_rich Low_complexity Low_complexity 1 56 0 846 215 42 67 chr5 26339293 26339676 -176745856 - MLT1A1 LTR MaLR -7 421 2 3879 240 55 43 chr5 26339677 26340733 -176744799 - MLT1A1-int LTR MaLR 0 1735 667 636 171 20 7 chr5 26340733 26340885 -176744647 - L1MA4A LINE L1 -1 6302 6149 1980 164 26 65 chr5 26340904 26341366 -176744166 - MER65A LTR ERV1 -1 444 1 2143 141 0 0 chr5 26341461 26341773 -176743759 + AluSx SINE Alu 1 312 0 25 31 0 0 chr5 26341779 26341811 -176743721 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 26342758 26342786 -176742746 + AT_rich Low_complexity Low_complexity 1 28 0 2611 51 0 0 chr5 26342986 26343297 -176742235 + AluY SINE Alu 1 311 0 21 36 0 0 chr5 26343606 26343634 -176741898 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 26344179 26344208 -176741324 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 26345128 26345149 -176740383 + AT_rich Low_complexity Low_complexity 1 21 0 1931 164 0 0 chr5 26345159 26345458 -176740074 + AluSx SINE Alu 1 299 -13 222 217 28 49 chr5 26345988 26346131 -176739401 + (TTA)n Simple_repeat Simple_repeat 1 140 0 276 271 62 42 chr5 26346267 26346363 -176739169 + MLT1J1 LTR MaLR 106 203 -243 3546 78 0 2 chr5 26346567 26347040 -176738492 + L1PA8 LINE L1 5701 6172 0 818 213 94 1 chr5 26347955 26348282 -176737250 - MSTD LTR MaLR 0 396 6 3259 269 89 35 chr5 26348297 26349482 -176736050 - MSTD-int LTR MaLR -17 1718 470 2011 117 7 23 chr5 26349489 26349796 -176735736 + AluSq SINE Alu 11 312 -1 432 339 70 26 chr5 26350768 26351154 -176734378 - MLT1L LTR MaLR 0 615 213 1515 152 31 66 chr5 26351336 26351648 -176733884 - AluJb SINE Alu 0 307 6 34 42 0 0 chr5 26352141 26352189 -176733343 + AT_rich Low_complexity Low_complexity 1 48 0 328 289 91 47 chr5 26352345 26352598 -176732934 + L2 LINE L2 3050 3313 0 915 119 143 6 chr5 26352999 26353167 -176732365 - THE1B LTR MaLR -173 191 1 5939 251 97 30 chr5 26353186 26355985 -176729547 + L1MA4A LINE L1 174 3196 -4013 1448 157 106 40 chr5 26355987 26356337 -176729195 - THE1C LTR MaLR -2 373 1 1576 119 26 22 chr5 26356337 26356605 -176728927 - THE1C-int LTR MaLR 0 1580 1312 1984 134 0 3 chr5 26356607 26356897 -176728635 + AluSc SINE Alu 2 290 -19 889 94 8 24 chr5 26356922 26357049 -176728483 - THE1C-int LTR MaLR -253 1327 1203 4685 157 68 48 chr5 26357049 26358010 -176727522 - THE1C-int LTR MaLR -598 982 3 1568 175 57 33 chr5 26358012 26358378 -176727154 - THE1C LTR MaLR 0 375 1 378 191 2 0 chr5 26358378 26358466 -176727066 + L1MA4A LINE L1 3192 3280 -3928 5208 226 28 21 chr5 26358469 26359771 -176725761 + L1PA10 LINE L1 1 1140 -4735 1149 73 0 0 chr5 26359778 26359952 -176725580 + AluSc SINE Alu 146 319 0 7163 205 14 11 chr5 26359966 26361523 -176724009 + L1PA10 LINE L1 1338 2899 -3562 * 9246 146 40 8 chr5 26361516 26362299 -176723233 + L1PA10 LINE L1 4012 4768 -1715 207 0 0 0 chr5 26362299 26362322 -176723210 + (TAA)n Simple_repeat Simple_repeat 2 24 0 9246 146 40 8 chr5 26362322 26363444 -176722088 + L1PA10 LINE L1 4768 6012 -471 1698 179 3 17 chr5 26363444 26363745 -176721787 + AluSx SINE Alu 1 297 -15 9246 146 40 8 chr5 26363745 26364210 -176721322 + L1PA10 LINE L1 6012 6461 -22 204 40 0 0 chr5 26364211 26364236 -176721296 + (TTAAA)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr5 26364393 26364418 -176721114 + AT_rich Low_complexity Low_complexity 1 25 0 11179 200 43 13 chr5 26364655 26365554 -176719978 + L1MA4A LINE L1 3275 4146 -3219 216 0 0 0 chr5 26365554 26365578 -176719954 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 11179 200 43 13 chr5 26365578 26368627 -176716905 + L1MA4A LINE L1 4146 7355 -10 2119 68 0 0 chr5 26369169 26369433 -176716099 - AluY SINE Alu -47 264 1 29 78 0 0 chr5 26369569 26369633 -176715899 + AT_rich Low_complexity Low_complexity 1 64 0 1298 190 11 144 chr5 26370112 26370585 -176714947 + MLT2D LTR ERVL 5 414 0 187 356 127 50 chr5 26370795 26371370 -176714162 - L2 LINE L2 -340 2974 2356 247 345 48 44 chr5 26371840 26372069 -176713463 + L1MC5 LINE L1 7668 7897 -64 28 105 0 0 chr5 26373144 26373249 -176712283 + AT_rich Low_complexity Low_complexity 1 105 0 2158 104 0 23 chr5 26374163 26374472 -176711060 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr5 26374582 26374617 -176710915 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 26375059 26375080 -176710452 + AT_rich Low_complexity Low_complexity 1 21 0 1540 203 36 36 chr5 26375186 26375576 -176709956 + MLT1B LTR MaLR 1 390 0 309 51 0 0 chr5 26375926 26375965 -176709567 + (TA)n Simple_repeat Simple_repeat 2 40 0 265 273 66 71 chr5 26376718 26376901 -176708631 - L2 LINE L2 -449 2865 2684 294 29 0 0 chr5 26376905 26376940 -176708592 + (CA)n Simple_repeat Simple_repeat 2 36 0 1696 197 28 28 chr5 26377372 26377762 -176707770 + MLT1B LTR MaLR 1 390 0 27 62 0 0 chr5 26378126 26378174 -176707358 + AT_rich Low_complexity Low_complexity 1 48 0 368 342 74 19 chr5 26378204 26378419 -176707113 - MIR SINE MIR -19 243 15 2218 114 7 0 chr5 26378426 26378724 -176706808 - AluSc SINE Alu -9 300 1 1767 152 0 0 chr5 26378907 26379170 -176706362 + AluSx SINE Alu 9 271 -41 225 65 0 0 chr5 26379183 26379214 -176706318 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1862 197 112 14 chr5 26379407 26379843 -176705689 - MLT1D LTR MaLR 0 505 27 2067 140 48 28 chr5 26380141 26380498 -176705034 + THE1B LTR MaLR 1 364 0 246 175 48 0 chr5 26381587 26381650 -176703882 - L1MA7 LINE L1 -459 5832 5767 2101 148 8 78 chr5 26381650 26381686 -176703846 + L1MA7 LINE L1 5833 5870 -421 1877 154 133 13 chr5 26381686 26382068 -176703464 + MSTA LTR MaLR 1 428 0 8718 152 19 36 chr5 26382069 26383674 -176701858 + MSTA-int LTR MaLR 3 1580 0 1639 167 159 8 chr5 26383674 26384046 -176701486 + MSTA LTR MaLR 1 428 0 2101 148 8 78 chr5 26384046 26384480 -176701052 + L1MA7 LINE L1 5868 6273 -18 28 48 0 0 chr5 26384490 26384532 -176701000 + AT_rich Low_complexity Low_complexity 1 42 0 1617 188 3 29 chr5 26384665 26384973 -176700559 - AluJb SINE Alu -10 302 3 309 361 101 27 chr5 26385561 26386140 -176699392 + L2 LINE L2 2653 3313 0 195 146 0 0 chr5 26387148 26387189 -176698343 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 26387746 26387775 -176697757 + AT_rich Low_complexity Low_complexity 1 29 0 3495 19 0 9 chr5 26387823 26388244 -176697288 - L1PA2 LINE L1 -2 6153 5737 285 57 0 0 chr5 26388244 26388279 -176697253 + L1P LINE L1 4217 4251 -1895 1984 131 3 0 chr5 26388307 26388597 -176696935 + AluSx SINE Alu 1 291 -21 393 22 0 0 chr5 26388611 26388657 -176696875 + (TA)n Simple_repeat Simple_repeat 1 46 0 294 29 0 0 chr5 26388656 26388691 -176696841 + (CA)n Simple_repeat Simple_repeat 2 36 0 * 1846 139 17 0 chr5 26389086 26389373 -176696159 + AluSx SINE Alu 1 292 -20 267 140 0 0 chr5 26391148 26391198 -176694334 + (CA)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr5 26391683 26391711 -176693821 + AT_rich Low_complexity Low_complexity 1 28 0 324 314 21 64 chr5 26392182 26392370 -176693162 + L2 LINE L2 3117 3296 -17 1038 213 15 56 chr5 26393811 26394079 -176691453 + AluJb SINE Alu 45 301 -11 233 239 11 125 chr5 26394258 26394434 -176691098 + L2 LINE L2 1790 1945 -1369 2313 91 3 0 chr5 26394584 26394892 -176690640 - AluY SINE Alu -2 309 1 199 320 0 0 chr5 26394947 26394997 -176690535 + L2 LINE L2 3217 3266 -6 486 253 188 6 chr5 26395013 26395183 -176690349 + MER52A LTR ERV1 1 201 -1554 * 3820 217 115 17 chr5 26395171 26396066 -176689466 + MER52A LTR ERV1 360 1342 -413 1466 101 5 5 chr5 26396066 26396283 -176689249 - pTR5 LTR ERV1 -2050 388 172 283 224 31 20 chr5 26396286 26396384 -176689148 - LTR30 LTR ERV1 -80 642 544 3847 126 62 101 chr5 26396388 26397372 -176688160 - pTR5 LTR ERV1 -417 2021 797 2236 199 34 2 chr5 26397372 26397840 -176687692 + MER52A LTR ERV1 1272 1754 -1 1836 151 39 36 chr5 26398066 26398430 -176687102 + MER47A DNA MER2_type 2 366 0 1203 256 87 76 chr5 26399616 26400284 -176685248 + L1MD2 LINE L1 5669 6343 -16 293 238 119 31 chr5 26400616 26400776 -176684756 + L1 LINE L1 4093 4266 -1880 1274 236 4 7 chr5 26400890 26401166 -176684366 + AluJo SINE Alu 1 275 -37 367 262 46 46 chr5 26401269 26401532 -176684000 + L1ME LINE L1 4582 4844 -1302 288 294 7 85 chr5 26401766 26401919 -176683613 + MLT1H LTR MaLR 67 207 -342 260 209 134 0 chr5 26402118 26402185 -176683347 + MLT1G1 LTR MaLR 489 564 -31 235 348 18 0 chr5 26402380 26402544 -176682988 + L1ME LINE L1 5268 5434 -728 * 682 263 110 32 chr5 26402530 26402923 -176682609 + L1ME3A LINE L1 5368 5751 -411 419 278 57 36 chr5 26402962 26403210 -176682322 + L1ME3A LINE L1 5888 6140 -30 3679 182 18 36 chr5 26403264 26404049 -176681483 + L1 LINE L1 3514 4284 -1862 1612 249 45 66 chr5 26504065 26504579 -176580953 + MER77 LTR ERV1 101 603 -2 447 19 0 0 chr5 26505203 26505255 -176580277 + (TA)n Simple_repeat Simple_repeat 2 53 0 312 212 15 0 chr5 26505377 26505443 -176580089 - ALR/Alpha Satellite centromeric -33 138 72 7229 61 127 7 chr5 26505443 26506472 -176579060 + L1P LINE L1 4 1156 -4990 512 323 5 0 chr5 26506879 26507096 -176578436 - L1M4 LINE L1 -3578 2568 2351 939 106 17 12 chr5 26507172 26507922 -176577610 + HSATII Satellite Satellite 1 753 -1 1114 124 4 10 chr5 26507949 26509496 -176576036 + HSATII Satellite Satellite 1 1538 -8 243 157 0 0 chr5 26509507 26509558 -176575974 + HSATII Satellite Satellite 1 51 -119 616 122 0 40 chr5 26509658 26509806 -176575726 - HSATII Satellite Satellite -28 142 1 849 91 15 15 chr5 26509866 26510069 -176575463 - HSATII Satellite Satellite -1 203 1 507 95 0 0 chr5 26510081 26510155 -176575377 - HSATII Satellite Satellite -76 94 21 1036 129 25 4 chr5 26510175 26510893 -176574639 - HSATII Satellite Satellite -7 733 1 651 170 0 0 chr5 26510929 26511082 -176574450 - HSATII Satellite Satellite 0 170 18 1220 100 26 11 chr5 26511100 26511643 -176573889 - HSATII Satellite Satellite 0 551 1 944 121 16 19 chr5 26511666 26512465 -176573067 - HSATII Satellite Satellite -23 796 1 1011 120 13 7 chr5 26512567 26513909 -176571623 + HSATII Satellite Satellite 1 1350 -92 993 131 9 11 chr5 26513926 26514766 -176570766 + HSATII Satellite Satellite 1 838 0 830 123 0 18 chr5 26514794 26514957 -176570575 + HSATII Satellite Satellite 7 166 -4 888 129 8 18 chr5 26514996 26516160 -176569372 + HSATII Satellite Satellite 1 1152 -35 853 114 0 34 chr5 26516173 26516348 -176569184 + HSATII Satellite Satellite 2 170 0 994 126 18 17 chr5 26516373 26517196 -176568336 + HSATII Satellite Satellite 1 823 -9 1089 117 9 9 chr5 26517231 26517548 -176567984 + HSATII Satellite Satellite 1 317 0 647 89 57 0 chr5 26517560 26517684 -176567848 + HSATII Satellite Satellite 20 150 -20 801 122 21 9 chr5 26517784 26518114 -176567418 + HSATII Satellite Satellite 1 334 -1 1143 85 26 13 chr5 26518144 26518600 -176566932 + HSATII Satellite Satellite 1 461 -1 1059 121 1 16 chr5 26518637 26519369 -176566163 + HSATII Satellite Satellite 1 721 -17 905 124 9 13 chr5 26519382 26519855 -176565677 + HSATII Satellite Satellite 1 471 0 962 147 3 0 chr5 26519881 26520269 -176565263 + HSATII Satellite Satellite 1 389 0 1053 130 5 0 chr5 26520306 26521119 -176564413 + HSATII Satellite Satellite 1 817 -105 1176 123 9 11 chr5 26521165 26523030 -176562502 + HSATII Satellite Satellite 1 1860 -50 1061 115 4 10 chr5 26523041 26523736 -176561796 + HSATII Satellite Satellite 1 691 -88 1131 105 13 8 chr5 26523841 26525260 -176560272 + HSATII Satellite Satellite 1 1425 0 962 132 13 0 chr5 26525276 26525737 -176559795 + HSATII Satellite Satellite 1 466 0 821 129 13 17 chr5 26525786 26526303 -176559229 + HSATII Satellite Satellite 1 514 -112 895 103 0 34 chr5 26526356 26526531 -176559001 + HSATII Satellite Satellite 1 169 -1 1041 112 10 19 chr5 26526554 26527636 -176557896 + HSATII Satellite Satellite 1 1072 0 974 130 3 19 chr5 26527655 26530162 -176555370 + HSATII Satellite Satellite 1 2465 -1 983 103 9 13 chr5 26530187 26530651 -176554881 + HSATII Satellite Satellite 1 462 -10 1086 129 11 8 chr5 26530662 26533832 -176551700 + HSATII Satellite Satellite 1 3180 0 1106 115 4 11 chr5 26533973 26535064 -176550468 + HSATII Satellite Satellite 1 1083 0 972 114 0 0 chr5 26535093 26535260 -176550272 + HSATII Satellite Satellite 4 170 0 1089 115 0 4 chr5 26535287 26535941 -176549591 + HSATII Satellite Satellite 1 651 -116 1068 123 18 13 chr5 26535959 26537641 -176547891 + HSATII Satellite Satellite 1 1690 0 1097 112 0 13 chr5 26537667 26539050 -176546482 + HSATII Satellite Satellite 1 1365 -7 447 215 0 0 chr5 26539033 26539154 -176546378 + (CACTC)n Simple_repeat Simple_repeat 4 124 0 * 498 70 0 0 chr5 26539233 26539304 -176546228 + (CATTC)n Simple_repeat Simple_repeat 5 75 0 962 121 4 17 chr5 26539681 26540394 -176545138 + HSATII Satellite Satellite 1 703 -1 1091 117 6 23 chr5 26540409 26541342 -176544190 + HSATII Satellite Satellite 1 916 0 186 143 0 0 chr5 26541379 26541414 -176544118 + HSATII Satellite Satellite 10 44 -126 1110 118 12 13 chr5 26541442 26542325 -176543207 + HSATII Satellite Satellite 1 881 0 539 141 70 0 chr5 26542341 26542483 -176543049 + HSATII Satellite Satellite 1 152 -18 767 111 0 21 chr5 26542500 26542644 -176542888 + HSATII Satellite Satellite 30 170 0 692 126 63 0 chr5 26542660 26542819 -176542713 + HSATII Satellite Satellite 1 169 -1 763 106 62 0 chr5 26542859 26543019 -176542513 + HSATII Satellite Satellite 1 170 0 989 130 9 13 chr5 26543041 26545715 -176539817 + HSATII Satellite Satellite 1 2662 0 1041 130 0 12 chr5 26545733 26546210 -176539322 + HSATII Satellite Satellite 1 471 0 1052 138 8 11 chr5 26546229 26547891 -176537641 + HSATII Satellite Satellite 1 1658 -39 857 115 0 19 chr5 26547907 26548063 -176537469 + HSATII Satellite Satellite 1 153 -17 851 160 11 0 chr5 26548090 26548360 -176537172 + HSATII Satellite Satellite 1 273 -93 950 116 1 14 chr5 26548378 26549285 -176536247 + HSATII Satellite Satellite 1 895 -35 1324 153 3 1 chr5 26549387 26558342 -176527190 + ALR/Alpha Satellite centromeric 1 8972 -50 1119 152 3 0 chr5 26558442 26560271 -176525261 + ALR/Alpha Satellite centromeric 1 1833 -57 1144 155 5 0 chr5 26560382 26564431 -176521101 - ALR/Alpha Satellite centromeric 0 4065 1 1109 163 4 1 chr5 26564539 26574685 -176510847 - ALR/Alpha Satellite centromeric 0 10175 1 34734 29 0 1 chr5 26574701 26579669 -176505863 - L1HS LINE L1 -1 6154 1191 775 106 21 0 chr5 26579809 26579950 -176505582 + HSATII Satellite Satellite 9 152 -18 844 113 17 12 chr5 26579961 26580208 -176505324 + HSATII Satellite Satellite 1 248 0 931 99 26 8 chr5 26580226 26580589 -176504943 + HSATII Satellite Satellite 1 369 -106 866 118 12 17 chr5 26580634 26581155 -176504377 + HSATII Satellite Satellite 1 518 -75 214 118 0 59 chr5 26581155 26581223 -176504309 + (CATTC)n Satellite Satellite 2 65 0 938 140 0 19 chr5 26581233 26581554 -176503978 + HSATII Satellite Satellite 1 315 -2 1065 113 0 0 chr5 26581589 26581902 -176503630 + HSATII Satellite Satellite 1 313 0 1016 119 6 17 chr5 26581921 26582637 -176502895 + HSATII Satellite Satellite 1 708 0 912 136 7 7 chr5 26582670 26583816 -176501716 + HSATII Satellite Satellite 1 1146 0 739 147 13 13 chr5 26583839 26584074 -176501458 + HSATII Satellite Satellite 1 235 -10 899 133 12 9 chr5 26584087 26584429 -176501103 + HSATII Satellite Satellite 1 343 0 1058 133 10 5 chr5 26584449 26585719 -176499813 + HSATII Satellite Satellite 1 1277 0 663 123 41 0 chr5 26585739 26585885 -176499647 + HSATII Satellite Satellite 18 169 -1 962 131 0 9 chr5 26585912 26586234 -176499298 + HSATII Satellite Satellite 1 319 -1 734 140 5 0 chr5 26586262 26586463 -176499069 + HSATII Satellite Satellite 1 202 -84 21 36 0 0 chr5 26586643 26586671 -176498861 + AT_rich Low_complexity Low_complexity 1 28 0 303 265 0 24 chr5 26587592 26587675 -176497857 + (CATA)n Simple_repeat Simple_repeat 3 83 0 26 30 0 0 chr5 26587862 26587895 -176497637 + AT_rich Low_complexity Low_complexity 1 33 0 1586 223 18 0 chr5 26587946 26588287 -176497245 + MER7A DNA MER2_type 2 346 0 587 256 130 52 chr5 26588920 26589194 -176496338 - MER77 LTR ERV1 -6 599 323 31 0 0 0 chr5 26589326 26589357 -176496175 + AT_rich Low_complexity Low_complexity 1 31 0 3899 270 73 20 chr5 26589362 26591148 -176494384 + L1MB7 LINE L1 3565 5445 -729 2317 217 53 7 chr5 26591164 26591744 -176493788 + L1MB7 LINE L1 5562 6168 -16 407 342 78 22 chr5 26591751 26592104 -176493428 - L2 LINE L2 -190 3123 2748 266 269 65 106 chr5 26592125 26592370 -176493162 + L3 LINE CR1 760 994 -583 1140 183 22 4 chr5 26593696 26593926 -176491606 + L1MB3 LINE L1 5949 6182 -1 609 330 75 54 chr5 26594035 26594740 -176490792 + L1MEc LINE L1 546 1265 -5131 710 156 31 0 chr5 26594820 26594948 -176490584 - MSTB1 LTR MaLR -300 132 1 26 64 0 0 chr5 26596181 26596228 -176489304 + AT_rich Low_complexity Low_complexity 1 47 0 247 253 44 0 chr5 26596362 26596453 -176489079 - LTR48 LTR ERV1 -48 739 645 211 148 16 16 chr5 26596453 26596514 -176489018 + (TA)n Simple_repeat Simple_repeat 1 61 0 1578 178 84 55 chr5 26596548 26596930 -176488602 - LTR49 LTR ERV1 -168 427 31 1934 133 7 4 chr5 26596930 26597208 -176488324 + AluSq SINE Alu 14 292 -21 1578 178 84 55 chr5 26597208 26597240 -176488292 - LTR49 LTR ERV1 -564 31 1 25 51 0 0 chr5 26597691 26597730 -176487802 + AT_rich Low_complexity Low_complexity 1 39 0 25 31 0 0 chr5 26597934 26597966 -176487566 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 26598365 26598393 -176487139 + AT_rich Low_complexity Low_complexity 1 28 0 1989 227 40 71 chr5 26598402 26599024 -176486508 + MER77 LTR ERV1 1 603 -2 562 346 3 3 chr5 26600168 26600483 -176485049 - L1M4 LINE L1 -3483 2663 2349 1002 126 11 15 chr5 26600558 26602170 -176483362 + HSATII Satellite Satellite 1 1605 -3 1061 108 0 5 chr5 26602199 26602406 -176483126 + HSATII Satellite Satellite 1 205 -13 182 119 48 0 chr5 26602416 26602458 -176483074 + (CATTC)n Satellite Satellite 2 45 0 1023 139 4 8 chr5 26602464 26603219 -176482313 + HSATII Satellite Satellite 1 752 -23 1121 120 8 6 chr5 26603242 26605169 -176480363 + HSATII Satellite Satellite 1 1930 0 888 136 24 9 chr5 26605192 26605816 -176479716 + HSATII Satellite Satellite 1 633 -99 945 130 9 0 chr5 26605828 26606132 -176479400 + HSATII Satellite Satellite 1 306 -1 1032 124 6 3 chr5 26606145 26607177 -176478355 + HSATII Satellite Satellite 1 1035 -80 797 133 14 14 chr5 26607195 26607626 -176477906 + HSATII Satellite Satellite 1 431 -125 352 229 12 0 chr5 26607794 26607877 -176477655 + MER20 DNA MER1_type 133 216 -3 1817 180 46 23 chr5 26607995 26608448 -176477084 - LTR56 LTR ERV1 0 437 1 2184 192 100 11 chr5 26608636 26609178 -176476354 - LTR49 LTR ERV1 -5 590 1 25 31 0 0 chr5 26609765 26609797 -176475735 + AT_rich Low_complexity Low_complexity 1 32 0 279 267 20 27 chr5 26609948 26610094 -176475438 + (TA)n Simple_repeat Simple_repeat 2 146 0 1277 256 48 10 chr5 26611039 26611453 -176474079 - MER54A LTR ERVL 0 901 472 2159 121 74 15 chr5 26611491 26611829 -176473703 - THE1B LTR MaLR 0 364 7 1515 220 52 3 chr5 26611838 26612224 -176473308 - MER54A LTR ERVL -489 412 8 22 0 0 0 chr5 26613394 26613416 -176472116 + AT_rich Low_complexity Low_complexity 1 22 0 1447 227 4 4 chr5 26613416 26613694 -176471838 - AluJb SINE Alu -24 288 11 1068 250 50 83 chr5 26614687 26614929 -176470603 - MLT1D LTR MaLR -2 503 255 1899 143 7 7 chr5 26614929 26615223 -176470309 - AluSc SINE Alu -13 296 3 1068 250 50 83 chr5 26615223 26615496 -176470036 - MLT1D LTR MaLR -250 255 5 21 0 0 0 chr5 26615556 26615577 -176469955 + AT_rich Low_complexity Low_complexity 1 21 0 578 210 18 9 chr5 26615592 26616235 -176469297 + GA-rich Low_complexity Low_complexity 1 648 0 734 271 42 13 chr5 26616329 26616706 -176468826 - L1MCa LINE L1 -3509 2917 2530 260 273 21 35 chr5 26616775 26616918 -176468614 - L1MCa LINE L1 -5031 1395 1255 1409 229 7 7 chr5 26617155 26617448 -176468084 - MLT1A1 LTR MaLR 0 365 73 918 141 5 4 chr5 26617773 26618411 -176467121 + HSATII Satellite Satellite 1 638 -2 211 165 70 9 chr5 26618415 26618530 -176467002 + (ATTCG)n Simple_repeat Simple_repeat 4 125 0 1023 126 8 8 chr5 26618530 26620833 -176464699 + HSATII Satellite Satellite 1 2303 -11 1020 127 8 5 chr5 26620855 26622119 -176463413 + HSATII Satellite Satellite 1 1268 0 985 126 8 20 chr5 26622146 26622870 -176462662 + HSATII Satellite Satellite 1 715 -9 21 36 0 0 chr5 26623050 26623078 -176462454 + AT_rich Low_complexity Low_complexity 1 28 0 264 231 0 51 chr5 26624001 26624079 -176461453 + (CATA)n Simple_repeat Simple_repeat 3 76 0 25 31 0 0 chr5 26624272 26624304 -176461228 + AT_rich Low_complexity Low_complexity 1 32 0 1600 223 18 0 chr5 26624356 26624697 -176460835 + MER7A DNA MER2_type 2 346 0 572 257 139 32 chr5 26625329 26625603 -176459929 - MER77 LTR ERV1 -6 599 323 28 0 0 0 chr5 26625737 26625765 -176459767 + AT_rich Low_complexity Low_complexity 1 28 0 4172 267 68 19 chr5 26625774 26627571 -176457961 + L1MB7 LINE L1 3565 5445 -729 2404 220 35 8 chr5 26627586 26628178 -176457354 + L1MB7 LINE L1 5561 6168 -16 377 363 63 9 chr5 26628251 26628539 -176456993 - L2 LINE L2 -266 3047 2748 1228 164 4 4 chr5 26630134 26630360 -176455172 + L1MB3 LINE L1 5957 6182 -1 378 330 73 53 chr5 26630469 26630826 -176454706 + L1MEc LINE L1 546 909 -5487 273 270 86 39 chr5 26630830 26631167 -176454365 + L1MEc LINE L1 870 1222 -4983 648 191 30 0 chr5 26631248 26631379 -176454153 - MSTB1 LTR MaLR -297 135 1 3056 45 3 0 chr5 26632525 26632904 -176452628 - L1PA2 LINE L1 -6 6149 5770 21 36 0 0 chr5 26633082 26633110 -176452422 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 26633325 26633357 -176452175 + AT_rich Low_complexity Low_complexity 1 32 0 495 243 138 11 chr5 26633609 26633798 -176451734 + MER20 DNA MER1_type 4 216 -3 1821 181 47 19 chr5 26633937 26634362 -176451170 - LTR56 LTR ERV1 0 445 9 2213 189 104 11 chr5 26634554 26635094 -176450438 - LTR49 LTR ERV1 -5 590 1 21 0 0 0 chr5 26635657 26635678 -176449854 + AT_rich Low_complexity Low_complexity 1 21 0 285 273 26 19 chr5 26635828 26635982 -176449550 + (TA)n Simple_repeat Simple_repeat 2 156 0 1376 248 46 10 chr5 26636926 26637341 -176448191 - MER54A LTR ERVL 0 901 472 2130 128 74 12 chr5 26637379 26637716 -176447816 - THE1B LTR MaLR 0 364 7 1565 207 7 3 chr5 26638133 26638433 -176447099 - AluJb SINE Alu -1 311 11 943 272 49 91 chr5 26639433 26639662 -176445870 - MLT1D LTR MaLR -15 490 253 1972 134 7 0 chr5 26639662 26639953 -176445579 - AluY SINE Alu -12 299 7 943 272 49 91 chr5 26639953 26640230 -176445302 - MLT1D LTR MaLR -252 253 5 21 0 0 0 chr5 26640290 26640311 -176445221 + AT_rich Low_complexity Low_complexity 1 21 0 381 88 38 25 chr5 26640325 26640405 -176445127 + GA-rich Low_complexity Low_complexity 4 84 0 591 188 24 0 chr5 26640426 26640591 -176444941 + GA-rich Low_complexity Low_complexity 3 171 0 272 255 19 6 chr5 26640610 26640767 -176444765 + GA-rich Low_complexity Low_complexity 2 160 0 466 210 23 28 chr5 26640778 26640954 -176444578 + GA-rich Low_complexity Low_complexity 3 177 0 847 259 51 13 chr5 26641049 26641423 -176444109 - L1MEc LINE L1 -3509 2706 2319 364 296 40 62 chr5 26641463 26641639 -176443893 - L1MEc LINE L1 -4983 1413 1242 1150 160 5 1 chr5 26641847 26650917 -176434615 + ALR/Alpha Satellite centromeric 1 9108 -36 603 147 4 35 chr5 26650930 26651198 -176434334 - HSATII Satellite Satellite -50 259 1 825 113 18 18 chr5 26651213 26651381 -176434151 - HSATII Satellite Satellite -1 169 2 881 124 12 20 chr5 26651392 26652148 -176433384 - HSATII Satellite Satellite -1 749 1 1034 99 0 17 chr5 26652175 26652347 -176433185 - HSATII Satellite Satellite -1 169 1 1032 146 16 2 chr5 26652386 26653698 -176431834 - HSATII Satellite Satellite 0 1329 1 981 118 2 19 chr5 26653735 26654603 -176430929 - HSATII Satellite Satellite -1 853 1 587 164 21 0 chr5 26654623 26654763 -176430769 - HSATII Satellite Satellite -27 143 1 804 134 23 15 chr5 26654790 26655191 -176430341 - HSATII Satellite Satellite -1 404 1 1197 117 9 12 chr5 26655214 26658937 -176426595 - HSATII Satellite Satellite -39 3709 1 1065 131 8 3 chr5 26658958 26660048 -176425484 - HSATII Satellite Satellite 0 1096 1 1074 133 5 4 chr5 26660064 26661408 -176424124 - HSATII Satellite Satellite -121 1345 1 871 136 8 15 chr5 26661443 26661928 -176423604 - HSATII Satellite Satellite -50 481 1 830 140 6 11 chr5 26661942 26662281 -176423251 - HSATII Satellite Satellite -98 337 1 870 124 0 0 chr5 26662309 26662462 -176423070 - HSATII Satellite Satellite -2 168 16 1011 125 1 12 chr5 26662477 26663203 -176422329 - HSATII Satellite Satellite -1 717 1 758 126 20 0 chr5 26663229 26663380 -176422152 - HSATII Satellite Satellite 0 170 17 795 151 0 0 chr5 26663396 26663555 -176421977 - HSATII Satellite Satellite -7 163 5 923 105 0 8 chr5 26663589 26663939 -176421593 - HSATII Satellite Satellite -14 347 1 1064 105 4 8 chr5 26663966 26664687 -176420845 - HSATII Satellite Satellite -77 718 1 803 107 21 0 chr5 26664699 26664839 -176420693 - HSATII Satellite Satellite -27 143 1 1122 129 5 4 chr5 26664858 26667085 -176418447 - HSATII Satellite Satellite 0 2228 1 943 115 3 16 chr5 26667111 26667484 -176418048 - HSATII Satellite Satellite -8 368 1 921 117 10 18 chr5 26667526 26668390 -176417142 - HSATII Satellite Satellite -3 857 1 950 102 17 0 chr5 26668436 26668790 -176416742 - HSATII Satellite Satellite 0 360 1 713 123 0 36 chr5 26668806 26669068 -176416464 - HSATII Satellite Satellite -1 252 1 3639 201 11 18 chr5 26769071 26769925 -176315607 - L1 LINE L1 -1978 4168 3321 206 227 0 0 chr5 26769995 26770039 -176315493 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1993 120 39 0 chr5 26770076 26770359 -176315173 - AluSg SINE Alu -11 299 6 32 26 0 0 chr5 26770669 26770708 -176314824 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 26770927 26770971 -176314561 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 26771806 26771829 -176313703 + AT_rich Low_complexity Low_complexity 1 23 0 512 155 26 22 chr5 26773987 26774121 -176311411 - MSTA LTR MaLR -252 123 8 3745 199 30 56 chr5 26774232 26774333 -176311199 - L1MA10 LINE L1 -127 6207 6105 225 0 0 0 chr5 26774333 26774358 -176311174 + (TG)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr5 26774357 26774378 -176311154 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 3745 199 30 56 chr5 26774358 26774380 -176311152 - L1MA10 LINE L1 -229 6105 6084 2288 98 0 7 chr5 26774380 26774686 -176310846 - AluSx SINE Alu -5 307 4 3745 199 30 56 chr5 26774686 26774775 -176310757 - L1MA10 LINE L1 -250 6084 5994 1261 206 45 75 chr5 26774775 26775004 -176310528 - MLT1A1 LTR MaLR -2 363 147 2066 83 14 0 chr5 26775004 26775180 -176310352 - AluY SINE Alu 0 309 126 195 42 0 0 chr5 26775180 26775204 -176310328 + (TA)n Simple_repeat Simple_repeat 2 25 0 2066 83 14 0 chr5 26775204 26775332 -176310200 - AluY SINE Alu -183 126 1 1261 206 45 75 chr5 26775332 26775475 -176310057 - MLT1A1 LTR MaLR -218 147 1 3745 199 30 56 chr5 26775475 26776038 -176309494 - L1MA10 LINE L1 -340 5994 5417 1893 117 0 0 chr5 26776038 26776302 -176309230 - AluSq SINE Alu -15 298 35 3745 199 30 56 chr5 26776302 26776992 -176308540 - L1MA10 LINE L1 -917 5417 4789 528 147 49 0 chr5 26776992 26777094 -176308438 + L1MA10 LINE L1 6228 6334 0 363 118 40 0 chr5 26777163 26777239 -176308293 + (TA)n Simple_repeat Simple_repeat 1 79 0 231 316 66 7 chr5 26777990 26778142 -176307390 + L1ME3A LINE L1 5999 6159 -11 * 677 308 100 59 chr5 26778141 26779195 -176306337 + L1MC4 LINE L1 6928 8024 -18 21 0 0 0 chr5 26779914 26779935 -176305597 + AT_rich Low_complexity Low_complexity 1 21 0 499 118 0 0 chr5 26780049 26780125 -176305407 + tRNA-Lys-AAG tRNA tRNA 1 76 0 3377 192 29 67 chr5 26780127 26781134 -176304398 - LTR5 LTR ERVK 0 969 1 260 317 59 30 chr5 26781195 26781397 -176304135 + L1ME2 LINE L1 153 360 -6063 440 308 73 57 chr5 26781843 26783036 -176302496 + L1ME2 LINE L1 1140 2542 -4580 1054 262 108 35 chr5 26783160 26783725 -176301807 + L1ME2 LINE L1 6103 6708 -251 260 138 35 35 chr5 26783754 26783812 -176301720 - MLT1F LTR MaLR -7 535 478 1174 123 6 6 chr5 26783812 26783991 -176301541 + AluSx SINE Alu 1 179 -133 2177 81 3 7 chr5 26784016 26784300 -176301232 + AluSp SINE Alu 1 283 -30 228 173 0 19 chr5 26784357 26784409 -176301123 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1075 276 77 85 chr5 26784552 26785127 -176300405 - MLT1G LTR MaLR 0 590 21 216 195 12 61 chr5 26786371 26786453 -176299079 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 462 263 21 27 chr5 26787101 26787287 -176298245 + Zaphod DNA AcHobo 957 1141 -2890 1172 268 100 33 chr5 26787364 26788031 -176297501 + Zaphod DNA AcHobo 1918 2629 -1402 553 147 6 159 chr5 26788065 26788228 -176297304 + MER1B DNA MER1_type 202 339 0 * 1092 247 123 72 chr5 26788228 26789226 -176296306 + Zaphod DNA AcHobo 2633 3681 -350 531 257 0 0 chr5 26789990 26790103 -176295429 - FLAM_A SINE Alu -24 118 6 2228 108 0 0 chr5 26790155 26790452 -176295080 + AluSx SINE Alu 2 298 -14 472 15 31 0 chr5 26790453 26790518 -176295014 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 876 226 136 31 chr5 26790587 26791042 -176294490 - MER114 LTR ERV -60 588 86 23 54 0 0 chr5 26791367 26791404 -176294128 + AT_rich Low_complexity Low_complexity 1 37 0 1071 231 21 87 chr5 26792035 26792567 -176292965 + LTR5 LTR ERVK 473 969 0 245 302 167 29 chr5 26792758 26793033 -176292499 + L2 LINE L2 1837 2149 -1165 5610 70 16 1 chr5 26793033 26793319 -176292213 + L1PA7 LINE L1 5401 5681 -473 303 28 0 0 chr5 26793319 26793355 -176292177 + (TG)n Simple_repeat Simple_repeat 2 37 0 5610 70 16 1 chr5 26793355 26793811 -176291721 + L1PA7 LINE L1 5681 6154 0 186 43 0 0 chr5 26794259 26794282 -176291250 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1927 97 0 0 chr5 26795241 26795557 -176289975 + L1PA8 LINE L1 5889 6204 0 27 29 0 0 chr5 26795634 26795668 -176289864 + AT_rich Low_complexity Low_complexity 1 34 0 222 343 15 0 chr5 26796259 26796326 -176289206 + MIR SINE MIR 11 78 -184 426 53 0 0 chr5 26796397 26796454 -176289078 + (CA)n Simple_repeat Simple_repeat 2 58 0 21 57 0 0 chr5 26797348 26797383 -176288149 + AT_rich Low_complexity Low_complexity 1 35 0 613 300 46 23 chr5 26797647 26797907 -176287625 - MLT1C LTR MaLR -2 465 200 235 161 0 36 chr5 26797948 26798004 -176287528 - MLT1C LTR MaLR -336 54 1 191 227 23 0 chr5 26798128 26798172 -176287360 + L2 LINE L2 3269 3313 0 249 169 31 0 chr5 26798527 26798592 -176286940 - MER53 DNA DNA -28 161 95 337 263 25 107 chr5 26799432 26799675 -176285857 + L2 LINE L2 3075 3297 -16 27 29 0 0 chr5 26801234 26801268 -176284264 + AT_rich Low_complexity Low_complexity 1 34 0 1139 159 24 19 chr5 26801929 26802137 -176283395 - THE1C LTR MaLR -166 209 1 9973 131 7 28 chr5 26802137 26803751 -176281781 - THE1B-int LTR MaLR 0 1580 1 1663 149 2 140 chr5 26803751 26804173 -176281359 - THE1B LTR MaLR 0 364 1 21 36 0 0 chr5 26804201 26804229 -176281303 + AT_rich Low_complexity Low_complexity 1 28 0 263 289 11 0 chr5 26805172 26805262 -176280270 + LTR67 LTR ERVL 458 548 -9 267 31 0 0 chr5 26805351 26805383 -176280149 + (T)n Simple_repeat Simple_repeat 1 32 0 2025 126 3 7 chr5 26806235 26806545 -176278987 + AluSc SINE Alu 1 309 0 31 26 0 0 chr5 26806646 26806684 -176278848 + AT_rich Low_complexity Low_complexity 1 38 0 2177 120 3 0 chr5 26807326 26807635 -176277897 + AluSx SINE Alu 1 310 -2 1948 207 32 82 chr5 26807982 26808580 -176276952 + MLT2B3 LTR ERVL 1 520 0 236 197 0 30 chr5 26809987 26810053 -176275479 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 31 26 0 0 chr5 26810075 26810113 -176275419 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 26810290 26810319 -176275213 + AT_rich Low_complexity Low_complexity 1 29 0 428 327 58 78 chr5 26812695 26813181 -176272351 + L1M4 LINE L1 3677 4152 -1994 2930 246 128 27 chr5 26813527 26814767 -176270765 + L1MC3 LINE L1 467 1580 -4984 2149 128 3 0 chr5 26814767 26815072 -176270460 - AluSx SINE Alu -6 306 1 2930 246 128 27 chr5 26815072 26816894 -176268638 + L1MC3 LINE L1 1580 4079 -2485 1156 211 5 33 chr5 26816894 26817259 -176268273 + LTR2 LTR ERV1 1 449 0 522 261 14 41 chr5 26817259 26817477 -176268055 + L1MC3 LINE L1 4076 4287 -2277 2010 131 6 10 chr5 26817495 26817808 -176267724 - AluSx SINE Alu 0 312 1 6817 220 45 46 chr5 26817864 26819751 -176265781 + L1MC3 LINE L1 4821 6717 -1486 2025 116 0 0 chr5 26819751 26820047 -176265485 - AluSc SINE Alu 0 298 3 6817 220 45 46 chr5 26820047 26821040 -176264492 + L1MC3 LINE L1 6717 7709 -494 1108 193 79 73 chr5 26821099 26821467 -176264065 + L1MC3 LINE L1 7834 8203 0 317 367 58 60 chr5 26821467 26821898 -176263634 + L1ME LINE L1 5294 5723 -447 25 0 0 0 chr5 26822286 26822311 -176263221 + AT_rich Low_complexity Low_complexity 1 25 0 198 222 0 0 chr5 26823102 26823156 -176262376 + (TA)n Simple_repeat Simple_repeat 1 54 0 2114 182 73 6 chr5 26823454 26823920 -176261612 - L1MA9 LINE L1 -2 6310 5814 * 24250 151 28 18 chr5 26823914 26830238 -176255294 - L1PA8A LINE L1 0 6446 1 639 230 27 4 chr5 26830347 26830508 -176255024 - L1M4 LINE L1 -370 5804 5643 899 214 57 12 chr5 26830515 26830757 -176254775 - L1P4 LINE L1 -470 5698 5452 2262 109 3 0 chr5 26831733 26832037 -176253495 + AluSg SINE Alu 1 305 -5 2496 71 0 0 chr5 26832986 26833296 -176252236 - AluY SINE Alu -1 310 1 415 370 80 9 chr5 26833642 26833866 -176251666 + MIR SINE MIR 10 249 -13 21 57 0 0 chr5 26834197 26834232 -176251300 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 26834541 26834565 -176250967 + AT_rich Low_complexity Low_complexity 1 24 0 1564 184 13 33 chr5 26836173 26836477 -176249055 - AluJo SINE Alu -14 298 1 381 93 0 0 chr5 26836921 26836975 -176248557 + (CA)n Simple_repeat Simple_repeat 2 55 0 456 237 71 44 chr5 26838649 26838954 -176246578 - MER52A LTR ERV1 -51 743 202 408 331 140 0 chr5 26838945 26839081 -176246451 - MER52A LTR ERV1 -931 824 670 * 24 0 0 0 chr5 26839178 26839202 -176246330 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr5 26841140 26841186 -176244346 + AT_rich Low_complexity Low_complexity 1 46 0 4046 121 20 3 chr5 26841186 26841821 -176243711 - L1PA16 LINE L1 -9 6157 5512 605 236 16 0 chr5 26842670 26842861 -176242671 - L1MD3 LINE L1 -2 7993 7800 1029 242 17 0 chr5 26842977 26843208 -176242324 + MLT1D LTR MaLR 3 237 -268 7659 110 22 3 chr5 26843221 26845165 -176240367 + L1PA8 LINE L1 4207 6172 0 560 250 39 69 chr5 26845175 26845407 -176240125 - L1M4 LINE L1 -1060 5086 4862 727 246 174 0 chr5 26845416 26845623 -176239909 + MLT1D LTR MaLR 263 505 0 246 282 0 42 chr5 26845979 26846050 -176239482 + L2 LINE L2 3204 3271 -1 3058 86 14 0 chr5 26846570 26846998 -176238534 + L1PA7 LINE L1 5713 6146 -8 1967 145 44 20 chr5 26847315 26847722 -176237810 - L1MA4 LINE L1 -9 6291 5875 2563 147 44 6 chr5 26847724 26848201 -176237331 + L1MA4 LINE L1 5408 5902 -398 203 278 14 0 chr5 26848859 26848931 -176236601 + (TA)n Simple_repeat Simple_repeat 1 73 0 2286 276 81 33 chr5 26849411 26850497 -176235035 + L1MC4a LINE L1 6667 7804 -4 21 0 0 0 chr5 26850569 26850590 -176234942 + AT_rich Low_complexity Low_complexity 1 21 0 1441 242 57 22 chr5 26850699 26851204 -176234328 + Charlie1b DNA MER1_type 1 523 0 509 316 23 12 chr5 26851231 26851402 -176234130 - MER5B DNA MER1_type 0 178 6 1680 215 36 29 chr5 26852188 26852579 -176232953 + MSTD LTR MaLR 2 374 0 1762 112 14 25 chr5 26853266 26853544 -176231988 + THE1C LTR MaLR 101 375 0 582 15 0 0 chr5 26853662 26853729 -176231803 - L1PA4 LINE L1 -191 5964 5898 198 0 0 0 chr5 26853751 26853773 -176231759 + (TAA)n Simple_repeat Simple_repeat 3 24 0 198 284 0 40 chr5 26853892 26853966 -176231566 + L2 LINE L2 2475 2545 -769 626 349 79 19 chr5 26854313 26854857 -176230675 + L2 LINE L2 2687 3266 -47 2362 78 3 3 chr5 26855349 26855656 -176229876 + AluSc SINE Alu 1 307 -2 715 246 45 6 chr5 26855775 26855954 -176229578 + MER58A DNA MER1_type 2 187 -37 649 292 182 23 chr5 26856816 26857124 -176228408 - MLT1G1 LTR MaLR -78 517 161 1986 188 3 3 chr5 26857233 26857584 -176227948 - MER47A DNA MER2_type 0 366 16 207 162 0 0 chr5 26860155 26860192 -176225340 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 57 0 0 chr5 26860280 26860315 -176225217 + AT_rich Low_complexity Low_complexity 1 35 0 1903 132 7 0 chr5 26860611 26860883 -176224649 - AluSg SINE Alu -32 278 5 327 343 62 37 chr5 26860957 26861310 -176224222 + L1MD2 LINE L1 4801 5162 -984 233 278 78 37 chr5 26861365 26861556 -176223976 + L1MD2 LINE L1 5260 5458 -2350 2291 279 83 40 chr5 26861878 26863127 -176222405 - L1ME1 LINE L1 -5 6161 4967 1386 187 38 54 chr5 26863127 26863443 -176222089 + AluJb SINE Alu 2 312 0 2291 279 83 40 chr5 26863443 26864342 -176221190 - L1ME1 LINE L1 -1199 4967 3765 2675 265 69 31 chr5 26864345 26864482 -176221050 - MER45B DNA AcHobo -541 1040 910 869 92 39 0 chr5 26864482 26864612 -176220920 - L1PA13 LINE L1 -1 6162 6028 2675 265 69 31 chr5 26864612 26865473 -176220059 - MER45B DNA AcHobo -671 910 4 195 162 0 0 chr5 26865496 26865533 -176219999 + (TG)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 26865608 26865631 -176219901 + AT_rich Low_complexity Low_complexity 1 23 0 214 149 21 21 chr5 26865753 26865800 -176219732 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1151 187 37 8 chr5 26866042 26866288 -176219244 + L1MD2 LINE L1 6087 6339 -20 2834 10 0 0 chr5 26867146 26867457 -176218075 - AluYa5 SINE Alu 0 311 1 695 287 54 16 chr5 26867908 26868226 -176217306 + MLT1G LTR MaLR 4 298 -292 1874 280 72 12 chr5 26868243 26869150 -176216382 - L1MC/D LINE L1 -743 5472 4575 1397 296 91 22 chr5 26869128 26869775 -176215757 - L1MC/D LINE L1 -5595 801 99 * 207 114 0 0 chr5 26869775 26869810 -176215722 + (TG)n Simple_repeat Simple_repeat 2 36 0 1397 296 91 22 chr5 26869810 26869878 -176215654 - L1MC/D LINE L1 -6297 99 37 223 227 30 15 chr5 26870117 26870183 -176215349 + GA-rich Low_complexity Low_complexity 5 71 0 556 188 38 30 chr5 26870669 26870802 -176214730 - L1PA15 LINE L1 0 6165 6032 2470 123 36 5 chr5 26870806 26871196 -176214336 + MLT2A1 LTR ERVL 2 403 -41 261 138 0 35 chr5 26871211 26871269 -176214263 + L1MC4 LINE L1 6648 6703 -1339 301 275 11 11 chr5 26871371 26871462 -176214070 + L1MC4 LINE L1 6613 6703 -1339 5441 88 4 4 chr5 26871494 26872218 -176213314 + HERVL-A1 LTR ERVL 2 725 -4929 * 8366 98 14 0 chr5 26872214 26873341 -176212191 + HERVL-A1 LTR ERVL 2227 3369 -2285 5886 105 21 40 chr5 26873342 26874249 -176211283 + HERVL-A1 LTR ERVL 4765 5654 0 2643 117 23 5 chr5 26874249 26874642 -176210890 + MLT2A1 LTR ERVL 1 400 -44 258 130 0 0 chr5 26874666 26874712 -176210820 - LTR66 LTR ERVL -171 439 394 5676 203 23 3 chr5 26874726 26876681 -176208851 - L1PA15 LINE L1 -212 5953 3958 34 0 0 0 chr5 26877280 26877314 -176208218 + AT_rich Low_complexity Low_complexity 1 34 0 7285 17 0 0 chr5 26877314 26878147 -176207385 - L1PA2 LINE L1 0 6155 5323 3859 34 0 0 chr5 26878146 26878620 -176206912 + L1PA2 LINE L1 4880 5353 -793 * 321 271 110 79 chr5 26878838 26879192 -176206340 - L1ME4a LINE L1 -158 5963 5599 657 282 67 20 chr5 26880439 26880694 -176204838 + LTR16A LTR ERVL 158 424 -26 239 312 72 22 chr5 26881436 26881574 -176203958 - MLT1J1 LTR MaLR -281 165 21 213 281 0 35 chr5 26882475 26882532 -176203000 + L3 LINE CR1 1521 1575 -2 408 141 3 67 chr5 26883829 26884463 -176201069 + (TA)n Simple_repeat Simple_repeat 1 593 0 333 0 0 0 chr5 26884482 26884519 -176201013 + (TG)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 26884518 26884543 -176200989 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 50 0 0 0 chr5 26884672 26884722 -176200810 + AT_rich Low_complexity Low_complexity 1 50 0 314 286 11 0 chr5 26884725 26884816 -176200716 + L1MC4 LINE L1 6612 6703 -1339 324 286 0 22 chr5 26884828 26884919 -176200613 + L1MC4 LINE L1 6614 6702 -1340 192 40 0 0 chr5 26884920 26884945 -176200587 + (TA)n Simple_repeat Simple_repeat 1 25 0 2130 116 3 3 chr5 26884950 26885253 -176200279 + AluSx SINE Alu 1 303 -9 228 297 16 0 chr5 26885580 26885644 -176199888 + CT-rich Low_complexity Low_complexity 2 66 0 300 70 0 0 chr5 26885650 26885693 -176199839 + (CA)n Simple_repeat Simple_repeat 2 44 0 371 235 128 28 chr5 26885694 26885873 -176199659 - L1MC4 LINE L1 -147 7895 7699 1335 219 29 4 chr5 26886142 26886436 -176199096 + AluJb SINE Alu 1 301 0 288 330 20 20 chr5 26886573 26886673 -176198859 - L2 LINE L2 0 3313 3214 832 280 48 46 chr5 26887056 26887517 -176198015 + MLT1H LTR MaLR 41 541 -8 274 358 0 59 chr5 26887534 26887721 -176197811 - L2 LINE L2 -660 2654 2479 1213 217 134 93 chr5 26888527 26888970 -176196562 + MLT2B1 LTR ERVL 1 467 -53 192 40 0 0 chr5 26888970 26888995 -176196537 + (TG)n Simple_repeat Simple_repeat 2 26 0 1213 217 134 93 chr5 26888995 26889044 -176196488 + MLT2B1 LTR ERVL 467 513 -7 314 258 150 42 chr5 26889944 26890064 -176195468 - L2 LINE L2 -5 3308 3176 6186 58 47 0 chr5 26890249 26891139 -176194393 - L1PA7 LINE L1 -1 6153 5223 231 114 0 0 chr5 26892099 26892143 -176193389 + (TTAA)n Simple_repeat Simple_repeat 3 46 0 1954 106 4 4 chr5 26892143 26892418 -176193114 - AluSc SINE Alu -32 277 3 933 260 40 173 chr5 26892433 26893079 -176192453 - L2 LINE L2 -275 3038 2527 2657 30 0 0 chr5 26893079 26893383 -176192149 - AluY SINE Alu -7 304 1 933 260 40 173 chr5 26893383 26893849 -176191683 - L2 LINE L2 -786 2527 2001 197 65 32 0 chr5 26894181 26894212 -176191320 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 306 297 134 39 chr5 26894218 26894370 -176191162 - L2 LINE L2 -1358 1956 1820 2234 108 0 3 chr5 26894370 26894675 -176190857 - AluSp SINE Alu -9 304 1 306 297 134 39 chr5 26894675 26894828 -176190704 - L2 LINE L2 -1494 1820 1622 183 339 17 0 chr5 26894926 26894985 -176190547 - L2 LINE L2 -2004 1310 1251 26 50 0 0 chr5 26897015 26897055 -176188477 + AT_rich Low_complexity Low_complexity 1 40 0 1499 168 84 19 chr5 26897601 26897923 -176187609 + MER61A LTR ERV1 1 343 0 541 345 103 11 chr5 26898463 26898814 -176186718 - L2 LINE L2 -1001 2313 1931 21 0 0 0 chr5 26898959 26898980 -176186552 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 26899166 26899188 -176186344 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr5 26899920 26899959 -176185573 + AT_rich Low_complexity Low_complexity 1 39 0 1554 211 140 24 chr5 26900401 26900852 -176184680 - MLT1D LTR MaLR -2 503 1 1252 199 36 20 chr5 26901483 26901789 -176183743 + LTR65 LTR ERV1 83 393 -276 339 283 7 76 chr5 26902003 26902095 -176183437 + LTR65 LTR ERV1 535 615 -54 2384 270 28 15 chr5 26902095 26902770 -176182762 - MER76 LTR ERV 0 688 5 339 283 7 76 chr5 26902770 26902822 -176182710 + LTR65 LTR ERV1 615 669 0 28 0 0 0 chr5 26903959 26903987 -176181545 + AT_rich Low_complexity Low_complexity 1 28 0 504 286 97 31 chr5 26905788 26906047 -176179485 + MLT1I LTR MaLR 116 391 -18 345 355 74 0 chr5 26906129 26906318 -176179214 + HERVL LTR ERVL 1852 2054 -3600 22 0 0 0 chr5 26906358 26906380 -176179152 + AT_rich Low_complexity Low_complexity 1 22 0 231 125 0 0 chr5 26907097 26907137 -176178395 + (CA)n Simple_repeat Simple_repeat 1 40 0 630 271 30 15 chr5 26907331 26907534 -176177998 - L1ME3A LINE L1 -43 6127 5922 22 70 0 0 chr5 26907894 26907937 -176177595 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 26908612 26908634 -176176898 + AT_rich Low_complexity Low_complexity 1 22 0 358 337 17 23 chr5 26909497 26909669 -176175863 + L2 LINE L2 2869 3039 -233 24 0 0 0 chr5 26909853 26909877 -176175655 + AT_rich Low_complexity Low_complexity 1 24 0 305 319 88 0 chr5 26911055 26911168 -176174364 + MIR SINE MIR 66 188 -74 372 43 0 0 chr5 26911253 26911299 -176174233 + (TC)n Simple_repeat Simple_repeat 2 47 0 287 337 6 91 chr5 26913074 26913249 -176172283 - L2 LINE L2 -2802 512 353 1959 120 0 4 chr5 26915631 26915905 -176169627 + AluSx SINE Alu 5 277 -35 21 57 0 0 chr5 26916536 26916571 -176168961 + AT_rich Low_complexity Low_complexity 1 35 0 21 100 0 0 chr5 26917600 26917670 -176167862 + AT_rich Low_complexity Low_complexity 1 70 0 595 328 44 22 chr5 26917815 26918135 -176167397 + L2 LINE L2 2595 2921 -393 296 286 0 22 chr5 26918301 26918392 -176167140 + L2 LINE L2 3225 3313 0 22 0 0 0 chr5 26918562 26918584 -176166948 + AT_rich Low_complexity Low_complexity 1 22 0 765 110 0 0 chr5 26918693 26918811 -176166721 + (TGGA)n Simple_repeat Simple_repeat 1 118 0 1446 211 84 96 chr5 26918865 26919377 -176166155 - LTR53 LTR ERVL 0 519 14 2393 69 0 7 chr5 26919853 26920159 -176165373 + AluY SINE Alu 1 304 -7 26 0 0 0 chr5 26920347 26920373 -176165159 + AT_rich Low_complexity Low_complexity 1 26 0 573 207 69 25 chr5 26920471 26920674 -176164858 - LTR37B LTR ERV1 0 468 257 289 233 19 58 chr5 26920664 26920767 -176164765 - LTR37B LTR ERV1 -167 301 203 * 191 301 27 14 chr5 26920930 26921003 -176164529 - MIR SINE MIR -116 146 73 1711 332 163 24 chr5 26921236 26922934 -176162598 + L2 LINE L2 1367 3301 -12 1980 148 32 37 chr5 26922946 26923323 -176162209 + THE1C LTR MaLR 1 375 0 9932 127 16 30 chr5 26923327 26924926 -176160606 + THE1C-int LTR MaLR 5 1580 0 1560 187 49 38 chr5 26924928 26925297 -176160235 + THE1C LTR MaLR 3 375 0 43 20 0 0 chr5 26926636 26926686 -176158846 + AT_rich Low_complexity Low_complexity 1 50 0 2139 118 0 0 chr5 26927163 26927460 -176158072 - AluSg SINE Alu -13 297 1 1357 259 41 47 chr5 26927546 26928033 -176157499 - MLT1D LTR MaLR -9 496 13 439 235 52 46 chr5 26928053 26928206 -176157326 + MER5A DNA MER1_type 30 183 -6 25 0 0 0 chr5 26928266 26928291 -176157241 + AT_rich Low_complexity Low_complexity 1 25 0 938 241 89 40 chr5 26929427 26929775 -176155757 + MLT1A1 LTR MaLR 1 365 0 230 333 0 34 chr5 26929975 26930092 -176155440 + MIR SINE MIR 137 249 -13 5156 146 7 9 chr5 26930341 26931549 -176153983 - L1PA16 LINE L1 -3 6866 5678 420 133 57 203 chr5 26931551 26931709 -176153823 - L1 LINE L1 -2423 3723 3589 * 6622 251 101 32 chr5 26931707 26934435 -176151097 - L1PA16 LINE L1 -1158 5691 3151 1632 210 7 3 chr5 26934435 26934744 -176150788 - AluJb SINE Alu -2 310 1 6622 251 101 32 chr5 26934744 26934955 -176150577 - L1PA16 LINE L1 -3698 3151 2956 2220 164 76 0 chr5 26934955 26935351 -176150181 + MSTB LTR MaLR 1 426 0 6622 251 101 32 chr5 26935351 26936224 -176149308 - L1PA16 LINE L1 -3893 2956 1415 1224 254 0 43 chr5 26936652 26936955 -176148577 - L1PA16 LINE L1 -6116 733 444 961 307 97 17 chr5 26937691 26938105 -176147427 - L1M2 LINE L1 -6399 450 4 23 33 0 0 chr5 26938647 26938677 -176146855 + AT_rich Low_complexity Low_complexity 1 30 0 216 319 49 49 chr5 26938900 26939063 -176146469 + L2 LINE L2 3151 3313 0 304 216 32 24 chr5 26939145 26939270 -176146262 + (TA)n Simple_repeat Simple_repeat 2 127 0 22 56 0 0 chr5 26939429 26939465 -176146067 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 26939871 26939907 -176145625 + AT_rich Low_complexity Low_complexity 1 36 0 354 282 19 19 chr5 26940086 26940189 -176145343 + L2 LINE L2 3209 3311 -2 21 0 0 0 chr5 26940917 26940938 -176144594 + AT_rich Low_complexity Low_complexity 1 21 0 435 296 9 0 chr5 26940963 26941078 -176144454 + L1MEc LINE L1 131 246 -6150 1223 242 54 84 chr5 27041091 27041184 -176044348 + MLT2B3 LTR ERVL 126 220 -334 5017 114 5 52 chr5 27041184 27042003 -176043529 - LTR17 LTR ERV1 0 780 1 1223 242 54 84 chr5 27042003 27042351 -176043181 + MLT2B3 LTR ERVL 220 554 0 189 298 202 29 chr5 27042488 27042592 -176042940 + MIR SINE MIR 48 169 -93 1708 272 37 54 chr5 27043076 27043672 -176041860 + MLT1E LTR MaLR 1 586 -7 206 0 0 65 chr5 27043739 27043770 -176041762 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 339 307 79 42 chr5 27044088 27044277 -176041255 + MIR SINE MIR 10 205 -57 3182 110 2 40 chr5 27044277 27044804 -176040728 + L1PA13 LINE L1 5657 6163 0 333 279 36 9 chr5 27044869 27044980 -176040552 + MER94 DNA DNA 19 132 -2 22 0 0 0 chr5 27045223 27045245 -176040287 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 27045761 27045792 -176039740 + AT_rich Low_complexity Low_complexity 1 31 0 1653 87 0 0 chr5 27045809 27046027 -176039505 + AluY SINE Alu 92 309 -2 877 168 5 92 chr5 27046382 27046578 -176038954 + AluJb SINE Alu 1 179 -133 387 0 0 0 chr5 27046586 27046629 -176038903 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 304 20 17 chr5 27046714 27046964 -176038568 + GA-rich Low_complexity Low_complexity 1 250 0 222 230 0 44 chr5 27046987 27047122 -176038410 + GA-rich Low_complexity Low_complexity 1 129 0 941 242 4 37 chr5 27047274 27047518 -176038014 + MLT1D LTR MaLR 3 238 -388 189 0 0 0 chr5 27047518 27047539 -176037993 + (TTA)n Simple_repeat Simple_repeat 1 21 0 1411 165 55 4 chr5 27047590 27047845 -176037687 - AluJb SINE Alu -44 268 1 1130 211 0 38 chr5 27047868 27048129 -176037403 + MLT1D LTR MaLR 254 504 -1 3431 34 0 0 chr5 27049096 27049509 -176036023 - L1PA4 LINE L1 -5 6150 5738 24 0 0 0 chr5 27049555 27049579 -176035953 + AT_rich Low_complexity Low_complexity 1 24 0 8582 22 1 0 chr5 27049939 27050948 -176034584 - L1PA4 LINE L1 -1439 4707 3698 7507 33 0 0 chr5 27050948 27052415 -176033117 + L1PA4 LINE L1 4686 6152 -3 295 275 78 115 chr5 27052735 27053030 -176032502 - MLT1H LTR MaLR -156 393 110 963 235 98 15 chr5 27054169 27054487 -176031045 - L1MB7 LINE L1 -10 6174 5831 267 133 0 0 chr5 27054506 27054551 -176030981 + (CA)n Simple_repeat Simple_repeat 1 45 0 180 0 0 0 chr5 27055613 27055633 -176029899 + (A)n Simple_repeat Simple_repeat 1 20 0 1340 219 21 53 chr5 27056910 27056990 -176028542 - MER74C LTR ERVL -3 457 376 1904 129 28 0 chr5 27056990 27057276 -176028256 + AluSx SINE Alu 4 297 -15 1340 219 21 53 chr5 27057276 27057533 -176027999 - MER74C LTR ERVL -84 376 131 1293 221 5 63 chr5 27057541 27057921 -176027611 - L1 LINE L1 -1379 4767 4410 * 4373 177 18 55 chr5 27057917 27059009 -176026523 + L1MB1 LINE L1 5096 6167 -1 2068 135 3 3 chr5 27061333 27061629 -176023903 - AluSx SINE Alu -16 296 1 275 95 0 32 chr5 27062163 27062226 -176023306 + LTR66 LTR ERVL 379 439 -171 273 57 0 0 chr5 27062272 27062307 -176023225 + (GA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr5 27062317 27062338 -176023194 + AT_rich Low_complexity Low_complexity 1 21 0 1554 171 3 52 chr5 27062792 27063101 -176022431 + AluJo SINE Alu 1 294 -18 28 48 0 0 chr5 27064131 27064173 -176021359 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 27064209 27064245 -176021287 + AT_rich Low_complexity Low_complexity 1 36 0 332 377 49 12 chr5 27064660 27064904 -176020628 - L2 LINE L2 -935 2379 2127 189 107 0 0 chr5 27067143 27067171 -176018361 + (CCCCG)n Simple_repeat Simple_repeat 1 28 0 2215 138 69 12 chr5 27067360 27067765 -176017767 - MSTA LTR MaLR 0 428 1 2321 73 0 0 chr5 27068002 27068333 -176017199 + AluY SINE Alu 1 331 0 218 353 168 0 chr5 27070318 27070437 -176015095 - L2 LINE L2 -9 3263 3125 797 272 31 9 chr5 27070586 27070810 -176014722 - MIR SINE MIR -3 259 31 278 0 54 0 chr5 27072569 27072606 -176012926 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1872 169 29 8 chr5 27072612 27072996 -176012536 + L1MA8 LINE L1 5893 6284 -7 2005 137 0 0 chr5 27073072 27073356 -176012176 + AluSg SINE Alu 3 286 -24 30 27 0 0 chr5 27073391 27073428 -176012104 + AT_rich Low_complexity Low_complexity 1 37 0 345 308 103 0 chr5 27074449 27074566 -176010966 + L2 LINE L2 3184 3312 -1 189 0 0 0 chr5 27075382 27075403 -176010129 + (T)n Simple_repeat Simple_repeat 1 21 0 15862 183 51 14 chr5 27075774 27083200 -176002332 - L1MA2 LINE L1 0 7723 15 25 31 0 0 chr5 27083275 27083307 -176002225 + AT_rich Low_complexity Low_complexity 1 32 0 1986 116 10 23 chr5 27083315 27083617 -176001915 - AluSp SINE Alu -15 298 1 24 85 0 0 chr5 27085035 27085094 -176000438 + AT_rich Low_complexity Low_complexity 1 59 0 294 76 114 0 chr5 27085723 27085855 -175999677 + (TA)n Simple_repeat Simple_repeat 1 147 0 360 0 0 0 chr5 27085861 27085901 -175999631 + (CA)n Simple_repeat Simple_repeat 2 41 0 613 168 87 40 chr5 27085902 27086051 -175999481 + AluJb SINE Alu 130 285 -27 252 289 134 35 chr5 27086333 27086475 -175999057 + L2 LINE L2 3158 3313 0 857 269 20 5 chr5 27087045 27087246 -175998286 - MER58A DNA MER1_type 0 224 21 709 185 81 0 chr5 27087250 27087423 -175998109 + MER53 DNA DNA 3 189 0 375 105 0 0 chr5 27087560 27087617 -175997915 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 676 173 0 0 chr5 27087644 27087754 -175997778 - FRAM SINE Alu -71 105 1 3289 101 8 12 chr5 27087754 27088251 -175997281 + L1PB1 LINE L1 5295 5789 -362 290 45 36 80 chr5 27088251 27088363 -175997169 + (TA)n Simple_repeat Simple_repeat 1 107 0 2566 101 3 0 chr5 27088367 27088733 -175996799 + L1PB1 LINE L1 5785 6151 0 30 27 0 0 chr5 27089024 27089061 -175996471 + AT_rich Low_complexity Low_complexity 1 37 0 235 224 86 35 chr5 27089134 27089250 -175996282 - L1M4 LINE L1 -2515 3631 3510 1275 225 10 24 chr5 27089267 27089435 -175996097 - AluJo SINE Alu -23 289 125 252 0 0 0 chr5 27089435 27089463 -175996069 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1275 225 10 24 chr5 27089463 27089587 -175995945 - AluJo SINE Alu -187 125 1 316 261 103 18 chr5 27089592 27089757 -175995775 - L1M4 LINE L1 -2630 3516 3338 718 223 76 65 chr5 27089848 27089934 -175995598 - L1M4 LINE L1 -2921 3225 3141 3057 130 6 6 chr5 27089934 27090419 -175995113 + L1PB2 LINE L1 5663 6147 -4 718 223 76 65 chr5 27090419 27090793 -175994739 - L1M4 LINE L1 -3005 3141 2760 725 61 10 0 chr5 27091508 27091607 -175993925 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 550 143 0 27 chr5 27091712 27091824 -175993708 + (TTTC)n Simple_repeat Simple_repeat 3 111 0 1657 121 23 23 chr5 27091846 27092110 -175993422 - AluSp SINE Alu -47 266 3 21 36 0 0 chr5 27092159 27092187 -175993345 + AT_rich Low_complexity Low_complexity 1 28 0 237 173 0 39 chr5 27092195 27092247 -175993285 + MER76 LTR ERV 8 57 -631 200 313 42 0 chr5 27092370 27092466 -175993066 - MIR SINE MIR -36 226 127 27 81 0 0 chr5 27092537 27092599 -175992933 + AT_rich Low_complexity Low_complexity 1 62 0 380 350 172 13 chr5 27093508 27093968 -175991564 + L3 LINE CR1 968 1500 -77 314 359 59 48 chr5 27094505 27094859 -175990673 + L1MEd LINE L1 270 627 -5492 222 105 0 0 chr5 27094978 27095016 -175990516 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 1782 153 58 9 chr5 27095935 27096262 -175989270 - MER61A LTR ERV1 0 343 1 30 45 0 0 chr5 27097071 27097115 -175988417 + AT_rich Low_complexity Low_complexity 1 44 0 198 398 91 8 chr5 27097367 27097608 -175987924 + L2 LINE L2 2146 2406 -908 1813 158 57 3 chr5 27097857 27098173 -175987359 + MER1B DNA MER1_type 4 336 -1 413 221 16 49 chr5 27098173 27098232 -175987300 + MER20 DNA MER1_type 102 156 -63 1963 186 53 17 chr5 27098232 27098645 -175986887 - MSTA LTR MaLR 0 428 1 413 221 16 49 chr5 27098645 27098707 -175986825 + MER20 DNA MER1_type 156 219 0 225 51 102 85 chr5 27098751 27098810 -175986722 + L1PA10 LINE L1 6107 6166 -2 205 222 42 42 chr5 27099666 27099738 -175985794 - L2 LINE L2 -8 3305 3234 576 261 121 104 chr5 27099887 27100308 -175985224 - MLT1A2 LTR MaLR 0 374 17 24 32 0 0 chr5 27100684 27100715 -175984817 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 27101300 27101335 -175984197 + AT_rich Low_complexity Low_complexity 1 35 0 1063 233 110 36 chr5 27101493 27101802 -175983730 - L1M4b LINE L1 -6515 344 13 194 62 31 0 chr5 27101876 27101908 -175983624 + (TC)n Simple_repeat Simple_repeat 2 34 0 1332 250 80 28 chr5 27101983 27102118 -175983414 + L1M4 LINE L1 560 687 -6172 294 29 0 0 chr5 27102118 27102153 -175983379 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1332 250 80 28 chr5 27102153 27102441 -175983091 + L1M4 LINE L1 687 1005 -5854 1754 236 50 28 chr5 27102449 27103012 -175982520 + L1M4 LINE L1 4303 4877 -2080 324 314 84 42 chr5 27103489 27103893 -175981639 - L1M4 LINE L1 -3168 2978 2558 356 191 16 24 chr5 27104785 27104911 -175980621 + C-rich Low_complexity Low_complexity 5 129 0 184 77 96 0 chr5 27104914 27104966 -175980566 + CT-rich Low_complexity Low_complexity 3 59 0 31 0 0 0 chr5 27105674 27105705 -175979827 + AT_rich Low_complexity Low_complexity 1 31 0 933 236 148 116 chr5 27107477 27108199 -175977333 - L1ME1 LINE L1 -18 6148 5404 241 215 15 15 chr5 27108340 27108405 -175977127 + L1M4 LINE L1 6020 6084 -873 24 32 0 0 chr5 27108408 27108439 -175977093 + AT_rich Low_complexity Low_complexity 1 31 0 493 241 71 61 chr5 27108468 27108671 -175976861 - L1ME1 LINE L1 -3068 3078 2870 668 160 8 8 chr5 27108671 27108802 -175976730 - L1MA6 LINE L1 -7 6293 6163 493 241 71 61 chr5 27108802 27108893 -175976639 - L1ME1 LINE L1 -3276 2870 2781 1056 198 33 5 chr5 27109166 27109378 -175976154 - MER20 DNA MER1_type 0 219 2 16940 126 5 8 chr5 27109414 27112957 -175972575 + L1PA8A LINE L1 2570 6102 -29 2286 98 3 0 chr5 27112994 27113291 -175972241 - AluSp SINE Alu -15 298 1 1450 177 75 39 chr5 27113672 27114034 -175971498 + THE1C LTR MaLR 1 375 0 8484 162 21 40 chr5 27114036 27115644 -175969888 + THE1B-int LTR MaLR 3 1579 -1 1582 171 59 39 chr5 27115644 27116001 -175969531 + THE1B LTR MaLR 1 364 0 2474 245 75 3 chr5 27116576 27117283 -175968249 - L1ME1 LINE L1 -79 6087 5330 47 0 0 0 chr5 27117299 27117346 -175968186 + AT_rich Low_complexity Low_complexity 1 47 0 1613 236 54 58 chr5 27117346 27117848 -175967684 - L1ME1 LINE L1 -826 5320 4820 1977 168 31 11 chr5 27117848 27118205 -175967327 + THE1B LTR MaLR 1 364 0 1613 236 54 58 chr5 27118205 27118354 -175967178 - L1ME1 LINE L1 -1326 4820 4672 3791 219 52 9 chr5 27118522 27119419 -175966113 + L1MD2 LINE L1 5396 6331 -28 7496 199 43 17 chr5 27119505 27120307 -175965225 + L1PA15 LINE L1 3529 4308 -1857 2328 64 3 49 chr5 27120307 27120633 -175964899 - AluY SINE Alu 0 311 1 7496 199 43 17 chr5 27120633 27122052 -175963480 + L1PA15 LINE L1 4308 5802 -363 1332 49 0 12 chr5 27122053 27122215 -175963317 - AluY SINE Alu -151 160 1 1902 171 9 6 chr5 27122247 27122591 -175962941 + L1PA15 LINE L1 5815 6159 -6 3859 41 0 0 chr5 27122629 27123091 -175962441 + L1PA4 LINE L1 5679 6140 -15 351 0 0 0 chr5 27123091 27123130 -175962402 + (TA)n Simple_repeat Simple_repeat 1 39 0 344 341 51 46 chr5 27123326 27123543 -175961989 - MIR SINE MIR 0 262 45 462 368 66 22 chr5 27124116 27124526 -175961006 + LTR16A LTR ERVL 23 450 0 274 296 0 34 chr5 27125064 27125152 -175960380 - MIR SINE MIR -4 258 174 187 345 106 18 chr5 27125635 27125748 -175959784 + MIR SINE MIR 16 138 -124 230 316 88 18 chr5 27128043 27128157 -175957375 - MIR3 SINE MIR -51 157 36 1356 238 23 26 chr5 27128195 27128586 -175956946 + MLT1B LTR MaLR 1 390 0 925 146 20 7 chr5 27128766 27128917 -175956615 - MER4E LTR ERV1 -292 487 335 1314 264 124 60 chr5 27129185 27129984 -175955548 - L1ME1 LINE L1 -5 6161 5312 4576 169 71 5 chr5 27130110 27130941 -175954591 - MER4D LTR ERV1 -17 886 1 782 268 93 12 chr5 27130943 27131372 -175954160 - L1ME1 LINE L1 -912 5234 4771 5313 204 8 20 chr5 27131383 27132451 -175953081 + MSTA-int LTR MaLR 526 1580 0 1668 187 167 8 chr5 27132452 27132811 -175952721 + MSTA LTR MaLR 2 417 -11 258 260 0 49 chr5 27133104 27133227 -175952305 + L1MC4 LINE L1 7926 8042 0 188 289 133 12 chr5 27135303 27135386 -175950146 + MIR SINE MIR 48 140 -122 2225 119 0 0 chr5 27135703 27136013 -175949519 - AluSx SINE Alu 0 312 3 182 321 47 19 chr5 27136729 27136835 -175948697 - L2 LINE L2 -276 3037 2929 26 30 0 0 chr5 27137327 27137360 -175948172 + AT_rich Low_complexity Low_complexity 1 33 0 701 190 22 49 chr5 27137674 27137858 -175947674 + MER53 DNA DNA 11 189 0 941 149 0 0 chr5 27138733 27138881 -175946651 - MER6 DNA MER2_type -1 864 717 876 209 30 25 chr5 27138881 27139082 -175946450 - MER6 DNA MER2_type -663 202 1 1023 253 55 62 chr5 27139441 27140377 -175945155 + L1ME LINE L1 839 3698 -2517 512 297 46 10 chr5 27140369 27140587 -175944945 + L1ME LINE L1 5415 5639 -620 * 426 251 31 9 chr5 27140590 27140735 -175944797 + L1ME LINE L1 5705 5853 -394 1943 145 62 28 chr5 27141347 27141699 -175943833 + THE1B LTR MaLR 1 364 0 2393 80 3 3 chr5 27141900 27142212 -175943320 + AluSp SINE Alu 1 312 -1 2097 167 60 19 chr5 27142665 27143170 -175942362 + MLT2A2 LTR ERVL 1 554 0 29 28 0 0 chr5 27143367 27143403 -175942129 + AT_rich Low_complexity Low_complexity 1 36 0 1649 204 76 20 chr5 27143767 27144173 -175941359 - MSTB1 LTR MaLR -3 429 1 286 326 37 59 chr5 27144185 27144372 -175941160 + MER91B DNA MER1_type 3 185 -5 21 57 0 0 chr5 27145275 27145310 -175940222 + AT_rich Low_complexity Low_complexity 1 35 0 561 170 6 132 chr5 27145380 27145478 -175940054 + MIR SINE MIR 32 104 -158 2828 6 0 0 chr5 27145478 27145789 -175939743 - AluYa5 SINE Alu 0 311 1 561 170 6 132 chr5 27145789 27145849 -175939683 + MIR SINE MIR 104 170 -92 1164 153 0 5 chr5 27145857 27146046 -175939486 + L1PA11 LINE L1 5950 6137 -37 4511 104 23 0 chr5 27146102 27146763 -175938769 - L1PA12 LINE L1 -233 5935 5260 2417 208 10 4 chr5 27146766 27147281 -175938251 - L1PA12 LINE L1 -3734 3850 3333 1704 167 58 25 chr5 27147281 27147640 -175937892 + THE1C LTR MaLR 1 371 -4 1328 175 12 4 chr5 27147644 27147890 -175937642 + THE1C-int LTR MaLR 3 250 -1330 * 1829 213 22 25 chr5 27147887 27148334 -175937198 - L1PA12 LINE L1 -4727 2847 2402 315 0 0 0 chr5 27148358 27148393 -175937139 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3681 246 82 18 chr5 27148394 27149461 -175936071 - L1PA12 LINE L1 -5868 1713 610 356 217 26 72 chr5 27149492 27149644 -175935888 + MIR SINE MIR 87 231 -31 330 328 16 0 chr5 27150853 27150978 -175934554 + MIR SINE MIR 124 250 -12 434 316 88 50 chr5 27151112 27151508 -175934024 + MLT1J2 LTR MaLR 16 426 -24 194 314 144 17 chr5 27152082 27152200 -175933332 + L3b LINE CR1 1273 1405 -178 3593 259 28 26 chr5 27153225 27153701 -175931831 - ERVL LTR ERVL -2355 3409 2935 3003 80 30 18 chr5 27153701 27153745 -175931787 - MLT2A1 LTR ERVL 0 444 402 312 70 0 0 chr5 27153745 27153788 -175931744 + (CA)n Simple_repeat Simple_repeat 2 44 0 3003 80 30 18 chr5 27153788 27154182 -175931350 - MLT2A1 LTR ERVL -42 402 1 3593 259 28 26 chr5 27154182 27154694 -175930838 - ERVL LTR ERVL -2829 2935 2419 3454 234 22 0 chr5 27154924 27155683 -175929849 + ERVL LTR ERVL 1667 2442 -3322 293 212 30 0 chr5 27155684 27155750 -175929782 + MLT2F LTR ERVL 595 662 -1 600 286 5 25 chr5 27155753 27155952 -175929580 + MLT1J2-int LTR MaLR 3 197 -1174 1881 186 30 20 chr5 27156036 27156575 -175928957 - L1MA9 LINE L1 0 6312 5590 1112 257 13 10 chr5 27156605 27156905 -175928627 + MLT1J2-int LTR MaLR 303 603 -768 888 275 27 27 chr5 27157025 27157323 -175928209 + MLT1D LTR MaLR 206 503 -2 465 19 0 0 chr5 27157596 27157650 -175927882 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2096 115 0 7 chr5 27157650 27157946 -175927586 - AluSx SINE Alu -18 294 1 360 64 0 0 chr5 27157983 27158030 -175927502 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 1951 123 0 4 chr5 27158030 27158306 -175927226 - AluSc SINE Alu -32 277 3 1355 193 55 80 chr5 27158535 27158872 -175926660 - MLT1B LTR MaLR 0 390 63 2057 189 30 32 chr5 27158872 27159306 -175926226 + Tigger2a DNA MER2_type 1 433 -1 1355 193 55 80 chr5 27159306 27159368 -175926164 - MLT1B LTR MaLR -327 63 1 2103 112 0 0 chr5 27159584 27159908 -175925624 + AluSq SINE Alu 1 324 0 22 35 0 0 chr5 27159955 27159984 -175925548 + AT_rich Low_complexity Low_complexity 1 29 0 328 162 176 0 chr5 27159990 27160058 -175925474 + MADE1 DNA Mariner 1 80 0 423 338 83 26 chr5 27160671 27160973 -175924559 + L2 LINE L2 1390 1708 -1606 805 85 31 0 chr5 27161015 27161145 -175924387 + (TTTC)n Simple_repeat Simple_repeat 2 135 0 1402 233 3 18 chr5 27161163 27161494 -175924038 - MLT1A1 LTR MaLR -11 354 29 243 0 0 0 chr5 27161621 27161648 -175923884 + (CA)n Simple_repeat Simple_repeat 2 28 0 183 205 0 0 chr5 27162413 27162452 -175923080 + (TG)n Simple_repeat Simple_repeat 2 40 0 578 177 29 17 chr5 27162455 27162630 -175922902 + (TATG)n Simple_repeat Simple_repeat 4 180 0 391 165 24 0 chr5 27162666 27162751 -175922781 + (TA)n Simple_repeat Simple_repeat 2 88 0 230 152 0 0 chr5 27162751 27162797 -175922735 - LTR66 LTR ERVL -171 439 394 230 203 76 0 chr5 27162797 27162876 -175922656 - L1MC4 LINE L1 -1343 6699 6615 342 311 0 0 chr5 27162887 27162977 -175922555 + L1MC4 LINE L1 6614 6703 -1339 * 352 281 0 0 chr5 27162897 27162986 -175922546 - L1MC4 LINE L1 -1339 6703 6615 254 104 0 42 chr5 27162989 27163037 -175922495 + (CATATA)n Simple_repeat Simple_repeat 6 51 0 238 179 0 0 chr5 27163037 27163093 -175922439 - L1MC4 LINE L1 -1339 6703 6648 2047 247 17 17 chr5 27163770 27164236 -175921296 - MER70A LTR ERVL 0 472 7 221 269 162 75 chr5 27164776 27164827 -175920705 + L2 LINE L2 2714 2759 -513 4639 27 7 0 chr5 27164827 27165381 -175920151 + L1PA4 LINE L1 5598 6155 0 221 269 162 75 chr5 27165381 27165553 -175919979 + L2 LINE L2 2759 2956 -316 2030 132 10 0 chr5 27166613 27166916 -175918616 - AluSq SINE Alu -7 306 1 180 224 0 86 chr5 27167477 27167535 -175917997 - MIR3 SINE MIR -44 164 112 325 317 107 4 chr5 27168370 27168651 -175916881 + L1M4 LINE L1 2662 2971 -3175 264 160 0 0 chr5 27168745 27168795 -175916737 + L1ME3A LINE L1 1339 1388 -4996 * 3256 214 36 37 chr5 27168790 27169682 -175915850 + L1MB5 LINE L1 5276 6166 -8 598 284 124 42 chr5 27169784 27170116 -175915416 + L1ME3A LINE L1 3830 4133 -2249 2060 91 14 0 chr5 27170116 27170412 -175915120 + L1PA13 LINE L1 5845 6144 -19 598 284 124 42 chr5 27170412 27170839 -175914693 + L1ME3A LINE L1 4133 4651 -1731 330 26 0 0 chr5 27171018 27171057 -175914475 + (TG)n Simple_repeat Simple_repeat 1 39 0 209 119 24 0 chr5 27171057 27171099 -175914433 + GA-rich Low_complexity Low_complexity 2 44 0 291 300 84 43 chr5 27171108 27171291 -175914241 + L1ME3A LINE L1 4872 5075 -1307 2261 83 0 13 chr5 27171291 27171591 -175913941 + AluY SINE Alu 1 296 -15 291 300 84 43 chr5 27171591 27171730 -175913802 + L1ME3A LINE L1 5075 5207 -1175 2428 216 31 12 chr5 27171730 27172243 -175913289 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 27172245 27172333 -175913199 + Tigger7 DNA MER2_type 2400 2487 0 2252 90 0 7 chr5 27172352 27172653 -175912879 + AluY SINE Alu 13 311 0 472 333 41 35 chr5 27172653 27173022 -175912510 + L1ME3A LINE L1 5217 5587 -795 1641 176 46 30 chr5 27173072 27173441 -175912091 + THE1C LTR MaLR 1 375 0 8855 151 30 36 chr5 27173443 27175030 -175910502 + THE1C-int LTR MaLR 3 1579 -1 1258 200 67 41 chr5 27175030 27175368 -175910164 + THE1C LTR MaLR 1 402 -24 263 264 50 8 chr5 27175436 27175557 -175909975 + L1ME3A LINE L1 5691 5816 -590 607 299 36 25 chr5 27175594 27175872 -175909660 + L1ME3A LINE L1 6121 6401 -5 24 53 0 0 chr5 27176001 27176039 -175909493 + AT_rich Low_complexity Low_complexity 1 38 0 762 249 30 6 chr5 27176890 27177128 -175908404 - L1ME2 LINE L1 -259 5905 5712 27 39 0 19 chr5 27177366 27177392 -175908140 + AT_rich Low_complexity Low_complexity 1 26 -25 1854 141 7 7 chr5 27177392 27177683 -175907849 + AluSp SINE Alu 1 291 -22 27 39 0 19 chr5 27177683 27177708 -175907824 + AT_rich Low_complexity Low_complexity 26 51 0 26 0 0 0 chr5 27177822 27177848 -175907684 + AT_rich Low_complexity Low_complexity 1 26 0 333 0 0 0 chr5 27177932 27177969 -175907563 + (CA)n Simple_repeat Simple_repeat 1 37 0 198 277 50 50 chr5 27178111 27178212 -175907320 + MIR SINE MIR 52 152 -110 376 203 0 0 chr5 27178418 27178497 -175907035 - L1 LINE L1 -1729 4417 4339 4760 172 6 42 chr5 27178522 27180328 -175905204 + L1PA6 LINE L1 4409 6154 0 190 373 49 20 chr5 27180652 27180754 -175904778 - L2 LINE L2 -4 3268 3164 22 35 0 0 chr5 27180779 27180808 -175904724 + AT_rich Low_complexity Low_complexity 1 29 0 1649 225 11 3 chr5 27181751 27182111 -175903421 - MLT1A1 LTR MaLR -2 363 1 318 304 87 72 chr5 27183323 27183489 -175902043 + L2 LINE L2 2538 2711 -603 180 0 0 0 chr5 27183489 27183509 -175902023 + (CA)n Simple_repeat Simple_repeat 1 20 0 318 304 87 72 chr5 27183509 27183618 -175901914 + L2 LINE L2 2711 2817 -497 34 24 0 0 chr5 27184844 27184885 -175900647 + AT_rich Low_complexity Low_complexity 1 41 0 7706 218 20 33 chr5 27184981 27187622 -175897910 - L1P5 LINE L1 -660 5491 2966 292 288 36 9 chr5 27188063 27188174 -175897358 + MLT1J2 LTR MaLR 56 169 -281 1035 236 65 96 chr5 27189121 27189377 -175896155 + MLT2B1 LTR ERVL 3 265 -255 195 42 0 0 chr5 27189377 27189401 -175896131 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1035 236 65 96 chr5 27189401 27189626 -175895906 + MLT2B1 LTR ERVL 265 469 -51 521 15 15 0 chr5 27189626 27189692 -175895840 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 1035 236 65 96 chr5 27189692 27189743 -175895789 + MLT2B1 LTR ERVL 469 520 0 226 267 78 33 chr5 27191477 27191567 -175893965 - MLT1I LTR MaLR -243 166 73 23 54 0 0 chr5 27192567 27192604 -175892928 + AT_rich Low_complexity Low_complexity 1 37 0 305 174 116 0 chr5 27192796 27192882 -175892650 + L1MB3 LINE L1 6081 6176 -7 260 213 25 12 chr5 27193053 27193133 -175892399 + HAL1b LINE L1 1266 1346 -2 22 70 0 0 chr5 27193208 27193251 -175892281 + AT_rich Low_complexity Low_complexity 1 43 0 311 149 0 0 chr5 27194126 27194173 -175891359 + L1MA6 LINE L1 6062 6108 -192 1426 218 0 10 chr5 27194418 27194711 -175890821 + AluJo SINE Alu 2 291 -21 278 344 16 49 chr5 27194764 27194886 -175890646 - L2 LINE L2 -11 3261 3144 183 24 49 49 chr5 27195419 27195460 -175890072 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 472 134 0 0 chr5 27195464 27195531 -175890001 - AluSg/x SINE Alu -26 283 217 337 276 0 35 chr5 27195692 27195779 -175889753 + L2 LINE L2 3227 3310 -3 1942 123 97 32 chr5 27195859 27196201 -175889331 + THE1B LTR MaLR 1 364 0 210 358 132 48 chr5 27196622 27197287 -175888245 - L2 LINE L2 -978 2336 1616 1533 132 0 0 chr5 27199421 27199661 -175885871 + AluSq SINE Alu 68 307 0 462 79 0 0 chr5 27199759 27199822 -175885710 + (TA)n Simple_repeat Simple_repeat 2 64 0 337 349 46 46 chr5 27200583 27200801 -175884731 + MIR SINE MIR 45 262 0 263 49 24 0 chr5 27201014 27201055 -175884477 + (TA)n Simple_repeat Simple_repeat 1 42 0 4280 82 15 0 chr5 27201055 27201654 -175883878 - L1PA4 LINE L1 -19 6136 5529 1016 256 43 75 chr5 27201871 27202336 -175883196 + MLT1D LTR MaLR 3 452 -53 25 0 0 0 chr5 27203126 27203151 -175882381 + AT_rich Low_complexity Low_complexity 1 25 0 5272 48 0 0 chr5 27203471 27204115 -175881417 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 27204115 27204143 -175881389 + AT_rich Low_complexity Low_complexity 1 28 0 453 36 0 0 chr5 27204408 27204463 -175881069 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 459 293 7 0 chr5 27204994 27205141 -175880391 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 27205141 27205165 -175880367 + AT_rich Low_complexity Low_complexity 1 24 0 663 311 44 7 chr5 27205251 27205524 -175880008 - Charlie2 DNA MER1_type -2155 627 345 432 230 69 49 chr5 27205548 27205752 -175879780 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 27205803 27205848 -175879684 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2279 60 43 7 chr5 27206040 27206340 -175879192 - AluY SINE Alu 0 311 1 304 209 48 19 chr5 27206354 27206459 -175879073 - L1MD3 LINE L1 -8 7987 7880 * 673 273 25 50 chr5 27206457 27206699 -175878833 + L1MD3 LINE L1 6742 6977 -1018 184 273 0 0 chr5 27207030 27207074 -175878458 - L2 LINE L2 -7 3306 3263 23 33 0 0 chr5 27207688 27207718 -175877814 + AT_rich Low_complexity Low_complexity 1 30 0 597 261 96 43 chr5 27208856 27209091 -175876441 - MER110 LTR ERV1 -7 484 228 2355 90 3 0 chr5 27209091 27209390 -175876142 + AluSc SINE Alu 1 300 -9 597 261 96 43 chr5 27209390 27209457 -175876075 - MER110 LTR ERV1 -263 228 166 894 202 30 20 chr5 27209916 27210114 -175875418 - MER3 DNA MER1_type -5 204 5 450 114 0 0 chr5 27210983 27211053 -175874479 + (TG)n Simple_repeat Simple_repeat 2 71 0 264 256 12 24 chr5 27211464 27211546 -175873986 - MIR SINE MIR -5 257 177 813 271 28 9 chr5 27211713 27211931 -175873601 - MER58A DNA MER1_type -2 222 1 403 269 215 0 chr5 27212029 27212159 -175873373 - MER63A DNA MER1_type 0 210 53 652 238 21 0 chr5 27212666 27212809 -175872723 + AluJb SINE Alu 164 309 -3 279 350 96 0 chr5 27213186 27213363 -175872169 - LTR33 LTR ERVL -2 519 326 373 336 7 20 chr5 27213460 27213609 -175871923 - LTR33 LTR ERVL -374 147 1 447 204 11 0 chr5 27214718 27214806 -175870726 - MER72 LTR ERV1 -9 713 625 2618 84 24 50 chr5 27214806 27214925 -175870607 + L1PB1 LINE L1 5372 5493 -658 2105 113 0 0 chr5 27214925 27215233 -175870299 + AluY SINE Alu 1 308 0 2618 84 24 50 chr5 27215233 27215529 -175870003 + L1PB1 LINE L1 5493 5777 -374 312 27 0 0 chr5 27215534 27215571 -175869961 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 265 66 0 chr5 27215981 27216147 -175869385 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 202 186 57 0 chr5 27216147 27216287 -175869245 + (TA)n Simple_repeat Simple_repeat 1 148 0 1549 73 0 0 chr5 27216287 27216492 -175869040 + L1PB1 LINE L1 5782 5986 -165 278 68 0 0 chr5 27216493 27216537 -175868995 + L1PB1 LINE L1 6104 6147 -4 25 0 0 0 chr5 27216540 27216565 -175868967 + AT_rich Low_complexity Low_complexity 1 25 0 252 325 76 25 chr5 27216703 27216860 -175868672 - MIR SINE MIR -19 243 79 282 240 31 61 chr5 27217236 27217309 -175868223 + MLT1J LTR MaLR 64 133 -317 2472 123 3 6 chr5 27217309 27217674 -175867858 - THE1B LTR MaLR 0 364 1 282 240 31 61 chr5 27217674 27217698 -175867834 + MLT1J LTR MaLR 133 156 -294 2832 268 82 21 chr5 27217746 27218824 -175866708 + L1MCb LINE L1 1 1143 -4902 2672 248 154 24 chr5 27218826 27218952 -175866580 + L1MD3 LINE L1 5186 4432 -1714 2216 76 13 3 chr5 27218952 27219253 -175866279 + AluY SINE Alu 1 304 -7 2672 248 154 24 chr5 27219253 27220360 -175865172 + L1MD3 LINE L1 4431 5392 -754 2439 202 87 25 chr5 27220355 27220989 -175864543 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 27221098 27221295 -175864237 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 27221471 27221558 -175863974 - L2 LINE L2 -41 3231 3141 1836 86 4 22 chr5 27221828 27222097 -175863435 + AluSg1 SINE Alu 1 264 -45 480 269 60 60 chr5 27222206 27222489 -175863043 - L1M4 LINE L1 -1210 4936 4654 301 293 9 9 chr5 27222815 27222931 -175862601 - L1MCc LINE L1 -6226 197 82 324 48 0 0 chr5 27223471 27223513 -175862019 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 372 298 32 25 chr5 27223592 27223750 -175861782 - MIR SINE MIR -3 259 101 650 249 58 40 chr5 27223791 27224012 -175861520 - MER20 DNA MER1_type 0 219 1 361 245 125 42 chr5 27225466 27225618 -175859914 - L1MC5 LINE L1 -45 7916 7743 1385 203 7 42 chr5 27225618 27225924 -175859608 + AluJb SINE Alu 1 295 -17 361 245 125 42 chr5 27225924 27225963 -175859569 - L1MC5 LINE L1 -218 7743 7709 266 194 14 0 chr5 27226195 27226267 -175859265 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 1653 258 100 21 chr5 27226287 27227013 -175858519 - L1ME2 LINE L1 -120 6324 5542 509 383 17 14 chr5 27227111 27227456 -175858076 + LTR16A LTR ERVL 105 450 0 423 231 103 0 chr5 27227659 27227776 -175857756 + MLT1H1 LTR MaLR 427 555 0 1026 297 93 48 chr5 27227780 27228638 -175856894 - L1ME2 LINE L1 -3006 3420 2602 2781 175 23 17 chr5 27228638 27229159 -175856373 + MER1A DNA MER1_type 1 524 -3 1026 297 93 48 chr5 27229159 27230292 -175855240 - L1ME2 LINE L1 -3824 2602 1171 209 238 63 0 chr5 27230365 27230428 -175855104 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 2164 224 76 39 chr5 27230685 27231242 -175854290 - L1MC2 LINE L1 -195 6429 5894 2069 148 39 20 chr5 27231242 27231599 -175853933 - THE1B LTR MaLR 0 364 1 11339 95 9 2 chr5 27231599 27233168 -175852364 - THE1B-int LTR MaLR 0 1580 1 1815 167 39 25 chr5 27233168 27233527 -175852005 - THE1B LTR MaLR 0 364 1 2164 224 76 39 chr5 27233527 27233678 -175851854 - L1MC2 LINE L1 -729 5895 5693 1478 157 111 98 chr5 27233675 27234154 -175851378 - L1MCa LINE L1 -4944 1482 998 * 1107 220 68 114 chr5 27234162 27234557 -175850975 + MSTD LTR MaLR 20 396 0 3834 187 54 67 chr5 27234557 27235520 -175850012 - L1MCa LINE L1 -5429 997 47 578 239 24 6 chr5 27235541 27235708 -175849824 - L1MC2 LINE L1 -2358 5707 5538 584 271 109 57 chr5 27235814 27236198 -175849334 - L1MC2 LINE L1 -5995 431 28 453 347 50 48 chr5 27236264 27236765 -175848767 - L1M4 LINE L1 -1313 4833 4332 233 307 85 20 chr5 27236885 27237038 -175848494 - L1M4 LINE L1 -1954 4192 4030 21 0 0 0 chr5 27287596 27287617 -175797915 + AT_rich Low_complexity Low_complexity 1 21 0 655 246 50 5 chr5 27287696 27287895 -175797637 - L1MA7 LINE L1 -12 6279 6072 21 36 0 0 chr5 27288138 27288166 -175797366 + AT_rich Low_complexity Low_complexity 1 28 0 1894 106 72 10 chr5 27289954 27290247 -175795285 - AluSx SINE Alu -1 311 1 1776 80 42 0 chr5 27290253 27290490 -175795042 - AluSg SINE Alu -63 247 1 425 327 64 88 chr5 27290512 27291062 -175794470 - L2 LINE L2 -51 3262 2735 261 0 0 0 chr5 27291258 27291287 -175794245 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 592 297 69 29 chr5 27291302 27291578 -175793954 - ERVL LTR ERVL -2116 3648 3362 357 333 32 20 chr5 27291642 27292018 -175793514 - ERVL LTR ERVL -2441 3213 2777 927 320 52 18 chr5 27292186 27292624 -175792908 - ERVL LTR ERVL -3192 2572 2120 478 280 25 13 chr5 27292676 27292833 -175792699 + LTR41 LTR ERVL 10 168 -605 18724 181 33 22 chr5 27292881 27296208 -175789324 - L1MA3 LINE L1 -1 7723 4435 2380 68 7 3 chr5 27296208 27296503 -175789029 - AluY SINE Alu -14 297 2 18724 181 33 22 chr5 27296503 27298080 -175787452 - L1MA3 LINE L1 -3289 4435 2877 2076 174 56 19 chr5 27298080 27298493 -175787039 - MSTA LTR MaLR 0 428 1 18724 181 33 22 chr5 27298493 27301108 -175784424 - L1MA3 LINE L1 -4847 2877 118 905 54 0 0 chr5 27301133 27301244 -175784288 + L1P1 LINE L1 5656 5766 -389 2252 79 3 0 chr5 27301248 27301538 -175783994 - AluSc SINE Alu -18 291 1 637 139 17 9 chr5 27301539 27301654 -175783878 - L1MA3 LINE L1 -7435 130 15 25 0 0 0 chr5 27302302 27302327 -175783205 + AT_rich Low_complexity Low_complexity 1 25 0 2002 320 56 40 chr5 27303234 27304170 -175781362 - L2 LINE L2 -552 2762 1812 273 57 0 0 chr5 27306213 27306248 -175779284 + (TAAAA)n Simple_repeat Simple_repeat 4 38 0 23 0 0 0 chr5 27307820 27307843 -175777689 + AT_rich Low_complexity Low_complexity 1 23 0 201 154 19 58 chr5 27307918 27307970 -175777562 + CT-rich Low_complexity Low_complexity 3 52 0 631 314 18 26 chr5 27308408 27308634 -175776898 - MIR SINE MIR -26 236 13 22 56 0 0 chr5 27308961 27308997 -175776535 + AT_rich Low_complexity Low_complexity 1 36 0 2398 212 27 14 chr5 27308997 27309619 -175775913 - L1 LINE L1 -754 5392 4763 335 147 13 119 chr5 27309614 27309723 -175775809 - L1PA8A LINE L1 -640 5491 5396 * 484 247 27 7 chr5 27309724 27309870 -175775662 + L1MB1 LINE L1 4462 4610 -1536 3006 162 19 6 chr5 27309889 27310425 -175775107 + L1MB1 LINE L1 5535 6077 -91 468 167 12 0 chr5 27310514 27310598 -175774934 + L1MC1 LINE L1 5427 5511 -822 1999 194 51 53 chr5 27310699 27311209 -175774323 + L1MC1 LINE L1 5516 6024 -309 * 4246 74 7 3 chr5 27311207 27311786 -175773746 + L1PA6 LINE L1 3524 4104 -2042 8797 77 28 0 chr5 27311787 27313743 -175771789 + L1PA6 LINE L1 4163 6149 -5 2197 79 7 3 chr5 27314700 27315003 -175770529 - L1PA7 LINE L1 -1 6153 5850 3666 67 8 2 chr5 27315003 27315496 -175770036 + L1P3 LINE L1 5317 5812 -342 26 0 0 0 chr5 27315563 27315589 -175769943 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr5 27316439 27316468 -175769064 + AT_rich Low_complexity Low_complexity 1 29 0 1786 251 70 35 chr5 27317863 27318436 -175767096 + MLT1E LTR MaLR 1 593 0 423 0 0 0 chr5 27318576 27318623 -175766909 + (TG)n Simple_repeat Simple_repeat 2 48 0 589 127 3 7 chr5 27318662 27318772 -175766760 + L1P LINE L1 4981 5087 -1059 22 0 0 0 chr5 27318923 27318945 -175766587 + AT_rich Low_complexity Low_complexity 1 22 0 5317 105 112 29 chr5 27319018 27320095 -175765437 - MER11A LTR ERVK 0 1266 4 46 62 0 0 chr5 27320334 27320415 -175765117 + AT_rich Low_complexity Low_complexity 1 81 0 4358 181 9 11 chr5 27320492 27321785 -175763747 + L1P5 LINE L1 4364 5660 -491 28 0 0 0 chr5 27321825 27321853 -175763679 + AT_rich Low_complexity Low_complexity 1 28 0 3532 108 13 6 chr5 27321853 27322398 -175763134 - L1PB1 LINE L1 -3 6864 6316 14690 173 74 29 chr5 27322505 27328544 -175756988 - L1PB1 LINE L1 -567 6300 1 21 36 0 0 chr5 27328771 27328799 -175756733 + AT_rich Low_complexity Low_complexity 1 28 0 341 372 36 0 chr5 27329945 27330141 -175755391 + MIR SINE MIR 45 247 -15 414 280 46 74 chr5 27330430 27330798 -175754734 + MLT1H LTR MaLR 51 376 -33 23 54 0 0 chr5 27330880 27330917 -175754615 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 27330984 27331012 -175754520 + AT_rich Low_complexity Low_complexity 1 28 0 1447 251 19 40 chr5 27331031 27331400 -175754132 + MLT2D LTR ERVL 1 361 -53 785 253 96 37 chr5 27331400 27331724 -175753808 + MER2 DNA MER2_type 1 343 -1 1447 251 19 40 chr5 27331724 27331777 -175753755 + MLT2D LTR ERVL 361 414 0 2562 249 32 16 chr5 27331779 27332946 -175752586 + ERVL-D LTR ERVL 4 1262 -4502 2532 64 0 3 chr5 27332952 27333264 -175752268 - AluY SINE Alu 0 311 1 1543 194 7 26 chr5 27333278 27333582 -175751950 + ERVL LTR ERVL 4307 4604 -1160 327 237 102 46 chr5 27333582 27333715 -175751817 + MLT1A2 LTR MaLR 1 137 -244 31 26 0 0 chr5 27333726 27333764 -175751768 + AT_rich Low_complexity Low_complexity 1 38 0 633 262 15 0 chr5 27333855 27334015 -175751517 + MLT1A2 LTR MaLR 188 335 -39 210 171 0 0 chr5 27334271 27334312 -175751220 + (TG)n Simple_repeat Simple_repeat 1 41 0 1480 232 49 0 chr5 27334330 27334658 -175750874 + MER7A DNA MER2_type 4 345 -1 1750 185 0 3 chr5 27335151 27335448 -175750084 - AluJb SINE Alu -16 296 1 1124 274 36 27 chr5 27335481 27335846 -175749686 - MLT1A2 LTR MaLR -6 368 1 504 240 0 0 chr5 27336014 27336193 -175749339 + (TA)n Simple_repeat Simple_repeat 2 180 0 10464 238 34 9 chr5 27337063 27338076 -175747456 + L1M2 LINE L1 7 994 -5855 498 17 0 0 chr5 27338076 27338135 -175747397 + (CA)n Simple_repeat Simple_repeat 1 59 0 10464 238 34 9 chr5 27338135 27339514 -175746018 + L1M2 LINE L1 994 2458 -4391 3430 159 16 14 chr5 27339530 27340450 -175745082 + L1MA3 LINE L1 5225 6303 -2 3883 239 13 12 chr5 27340546 27341614 -175743918 - L1 LINE L1 -2081 4065 2997 4933 201 22 15 chr5 27341617 27343661 -175741871 + L1PA15 LINE L1 4100 6160 -5 261 242 0 0 chr5 27343670 27343718 -175741814 + (TA)n Simple_repeat Simple_repeat 1 51 -15 189 0 0 0 chr5 27343718 27343739 -175741793 + (TG)n Simple_repeat Simple_repeat 2 22 0 261 242 0 0 chr5 27343739 27343756 -175741776 + (TA)n Simple_repeat Simple_repeat 50 66 0 1762 153 17 3 chr5 27344015 27344309 -175741223 - AluJb SINE Alu -14 298 1 535 286 63 11 chr5 27344893 27345068 -175740464 + MIR SINE MIR 55 238 -24 21 36 0 0 chr5 27345990 27346018 -175739514 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 27346653 27346674 -175738858 + AT_rich Low_complexity Low_complexity 1 21 0 608 267 84 46 chr5 27346759 27346975 -175738557 - MER77 LTR ERV1 -6 599 407 619 234 82 65 chr5 27346984 27347168 -175738364 - MER77-int LTR ERV1 -1496 2695 2509 1858 264 70 60 chr5 27347168 27348406 -175737126 - MER77-int LTR ERV1 -1712 4974 1920 1527 281 17 12 chr5 27348430 27348847 -175736685 - MER77-int LTR ERV1 -3760 431 13 398 355 153 11 chr5 27348941 27349223 -175736309 - MER77 LTR ERV1 -6 599 278 313 301 0 0 chr5 27349686 27349759 -175735773 - MER2 DNA MER2_type 0 345 273 899 238 15 0 chr5 27349788 27349990 -175735542 - MER2 DNA MER2_type -139 206 2 287 175 0 0 chr5 27349990 27350053 -175735479 + L1MC4 LINE L1 6640 6702 -1340 339 232 0 0 chr5 27350058 27350140 -175735392 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 256 366 80 9 chr5 27350147 27350259 -175735273 - L2 LINE L2 -623 2691 2572 1904 197 33 20 chr5 27350673 27351064 -175734468 - MSTD LTR MaLR 0 396 1 466 210 68 74 chr5 27351384 27351537 -175733995 + MLT1D LTR MaLR 1 152 -353 1771 257 65 23 chr5 27351537 27352129 -175733403 + MER92B LTR ERV1 1 409 -3 1394 228 63 6 chr5 27352133 27352467 -175733065 + MLT1D LTR MaLR 153 505 0 1783 167 3 14 chr5 27352646 27352940 -175732592 + AluSx SINE Alu 1 291 -21 639 71 0 0 chr5 27352943 27353028 -175732504 + (TA)n Simple_repeat Simple_repeat 1 85 0 259 222 19 0 chr5 27353275 27353329 -175732203 - MER50 LTR ERV1 -23 711 657 * 2881 137 12 18 chr5 27353325 27353822 -175731710 - MER50 LTR ERV1 -240 494 1 858 289 52 25 chr5 27354307 27354671 -175730861 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr5 27354862 27354883 -175730649 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 27354929 27354967 -175730565 + AT_rich Low_complexity Low_complexity 1 38 0 326 318 47 47 chr5 27355299 27355467 -175730065 - L1ME LINE L1 -413 5708 5538 977 245 32 86 chr5 27355467 27355875 -175729657 + MLT1B LTR MaLR 5 390 0 326 318 47 47 chr5 27355875 27355917 -175729615 - L1ME LINE L1 -582 5539 5498 297 0 0 0 chr5 27355949 27355982 -175729550 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 0 0 0 chr5 27355981 27356003 -175729529 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 668 131 0 0 chr5 27356527 27356626 -175728906 + HY3 scRNA scRNA 1 99 -2 291 157 0 0 chr5 27356639 27356690 -175728842 + (TA)n Simple_repeat Simple_repeat 2 52 0 2436 60 0 0 chr5 27357052 27357353 -175728179 - AluY SINE Alu -10 301 1 197 315 0 27 chr5 27357641 27357714 -175727818 + MIR SINE MIR 182 252 -10 1045 249 52 33 chr5 27357741 27358106 -175727426 + MER92A LTR ERV1 40 411 -1 2039 137 3 0 chr5 27359139 27359438 -175726094 + AluSp SINE Alu 1 300 -13 213 39 0 0 chr5 27359836 27359862 -175725670 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1852 268 52 14 chr5 27360522 27361112 -175724420 + L1M4 LINE L1 24 636 -5906 967 256 110 66 chr5 27361112 27361550 -175723982 - MLT1D LTR MaLR 0 505 49 905 251 89 20 chr5 27361555 27361612 -175723920 + L1M4 LINE L1 890 942 -5600 3594 104 22 4 chr5 27361612 27362159 -175723373 + L1PA13 LINE L1 5607 6163 0 905 251 89 20 chr5 27362159 27362399 -175723133 + L1M4 LINE L1 942 1218 -5324 1488 196 14 11 chr5 27362399 27362781 -175722751 + AluJb SINE Alu 6 388 0 905 251 89 20 chr5 27362781 27362828 -175722704 + L1M4 LINE L1 1218 1260 -5282 1021 237 11 38 chr5 27362829 27363095 -175722437 - MLT1B LTR MaLR 0 390 132 622 161 65 8 chr5 27363193 27363317 -175722215 - MLT1B LTR MaLR -259 131 1 1970 284 42 33 chr5 27363361 27364673 -175720859 + L1M4 LINE L1 1296 2772 -4053 1034 253 104 15 chr5 27364648 27365119 -175720413 + L1M4 LINE L1 3551 4063 -2581 * 198 0 0 0 chr5 27365337 27365359 -175720173 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1504 147 4 11 chr5 27365360 27365633 -175719899 - L1MA7 LINE L1 -8 6283 6013 248 396 90 4 chr5 27365901 27366146 -175719386 - L1MEc LINE L1 -5952 444 179 548 220 167 12 chr5 27367147 27367359 -175718173 + L1MA8 LINE L1 6036 6272 -40 419 254 58 10 chr5 27368140 27368312 -175717220 - MER92B LTR ERV1 0 556 257 1160 236 143 11 chr5 27368483 27368524 -175717008 - MLT2D LTR ERVL -1 413 379 417 86 0 0 chr5 27368524 27368582 -175716950 + (TG)n Simple_repeat Simple_repeat 1 58 0 1160 236 143 11 chr5 27368582 27368905 -175716627 - MLT2D LTR ERVL -35 379 1 2140 96 0 0 chr5 27369404 27369715 -175715817 - AluSg SINE Alu 0 311 1 1446 121 52 20 chr5 27369859 27370108 -175715424 - L1PA11 LINE L1 0 6174 5918 1664 258 18 2 chr5 27370643 27371140 -175714392 - L1 LINE L1 -2848 3298 2794 3875 184 16 6 chr5 27371183 27371890 -175713642 - MER50 LTR ERV1 -20 714 1 3019 209 1 9 chr5 27371896 27372547 -175712985 - L1 LINE L1 -3351 2795 2150 1672 159 21 3 chr5 27372543 27372883 -175712649 + L1PBa LINE L1 1691 2036 -4827 * 3228 183 16 11 chr5 27372883 27373511 -175712021 - LTR10B-int LTR ERV1 -6014 635 5 2102 226 22 10 chr5 27373511 27374010 -175711522 - LTR10B LTR ERV1 0 505 1 1371 304 31 52 chr5 27374010 27374552 -175710980 + L1ME LINE L1 11 541 -6318 831 320 94 22 chr5 27374610 27375248 -175710284 + L1ME LINE L1 1705 2388 -4571 3034 296 59 56 chr5 27375439 27377532 -175708000 + L1ME LINE L1 2482 4552 -2405 518 212 58 48 chr5 27377540 27377729 -175707803 + L1MB7 LINE L1 5994 6184 0 1052 209 48 101 chr5 27377947 27378324 -175707208 + MLT1A2 LTR MaLR 2 358 -16 2321 86 0 6 chr5 27378414 27378727 -175706805 - AluY SINE Alu 0 311 1 1237 187 52 42 chr5 27379060 27379349 -175706183 + AluJo SINE Alu 1 292 -10 181 0 69 0 chr5 27379982 27380011 -175705521 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 496 269 70 26 chr5 27380102 27380329 -175705203 + L1ME LINE L1 6228 6464 -511 21 0 0 0 chr5 27380500 27380521 -175705011 + AT_rich Low_complexity Low_complexity 1 21 0 215 264 19 0 chr5 27380864 27380917 -175704615 + L2 LINE L2 2854 2907 -365 209 353 57 74 chr5 27381094 27381162 -175704370 + L2 LINE L2 2954 3022 -291 1198 213 77 81 chr5 27381162 27381631 -175703901 + MLT1C LTR MaLR 1 467 0 209 353 57 74 chr5 27381631 27381928 -175703604 + L2 LINE L2 3022 3313 0 360 195 11 35 chr5 27382322 27382409 -175703123 + L1P LINE L1 4573 4657 -1489 22 0 0 0 chr5 27382769 27382791 -175702741 + AT_rich Low_complexity Low_complexity 1 22 0 261 0 0 0 chr5 27383167 27383196 -175702336 + (TG)n Simple_repeat Simple_repeat 2 30 0 1818 138 0 0 chr5 27383198 27383459 -175702073 + AluSq SINE Alu 1 261 -52 1185 310 29 36 chr5 27383474 27384106 -175701426 - L1ME2 LINE L1 -212 6021 5395 802 251 77 32 chr5 27384130 27384505 -175701027 - L1ME2 LINE L1 -855 5360 4969 1607 275 34 63 chr5 27384584 27384964 -175700568 - L1ME2 LINE L1 -1260 4955 4566 1924 250 72 27 chr5 27384964 27385587 -175699945 - MLT1E1 LTR MaLR -2 652 2 1607 275 34 63 chr5 27385587 27385842 -175699690 - L1ME2 LINE L1 -1649 4566 4305 2152 136 37 8 chr5 27385842 27386195 -175699337 + THE1B LTR MaLR 2 364 0 1607 275 34 63 chr5 27386195 27386574 -175698958 - L1ME2 LINE L1 -1910 4305 3969 702 295 84 37 chr5 27386594 27387027 -175698505 - L1ME2 LINE L1 -2763 3452 2976 2033 162 20 11 chr5 27387027 27387385 -175698147 + THE1B LTR MaLR 1 361 -3 702 295 84 37 chr5 27387385 27387439 -175698093 - L1ME2 LINE L1 -3239 2976 2926 512 383 66 27 chr5 27387637 27388047 -175697485 - L1ME2 LINE L1 -5932 464 39 215 162 27 54 chr5 27388232 27388306 -175697226 + A-rich Low_complexity Low_complexity 5 76 0 201 74 0 0 chr5 27388399 27388426 -175697106 + (TTA)n Simple_repeat Simple_repeat 2 28 0 917 215 138 0 chr5 27388429 27388675 -175696857 - AluJo SINE Alu -32 280 1 366 464 106 17 chr5 27388983 27389464 -175696068 + L1MC4a LINE L1 5513 6036 -1772 28 29 0 0 chr5 27389574 27389609 -175695923 + AT_rich Low_complexity Low_complexity 1 35 0 10980 151 14 12 chr5 27389849 27391119 -175694413 - L1PA10 LINE L1 0 6168 4901 1810 153 41 49 chr5 27391119 27391486 -175694046 + THE1B LTR MaLR 1 364 0 10980 151 14 12 chr5 27391486 27392965 -175692567 - L1PA10 LINE L1 -1267 4901 3394 25 31 0 0 chr5 27392998 27393030 -175692502 + AT_rich Low_complexity Low_complexity 1 32 0 240 287 72 62 chr5 27393170 27393379 -175692153 - L1ME LINE L1 -399 5765 5555 1590 188 0 4 chr5 27393668 27393940 -175691592 - AluSx SINE Alu -27 285 15 15796 206 30 22 chr5 27394462 27397212 -175688320 + L1P4 LINE L1 1542 4331 -1830 2548 45 0 3 chr5 27397212 27397524 -175688008 + AluY SINE Alu 1 311 0 15796 206 30 22 chr5 27397524 27398652 -175686880 + L1P4 LINE L1 4331 5448 -713 1479 86 14 14 chr5 27398652 27398873 -175686659 - pTR5 LTR ERV1 -2046 392 172 374 194 31 20 chr5 27398876 27398974 -175686558 - LTR30 LTR ERV1 -80 642 544 4670 133 58 33 chr5 27398975 27400071 -175685461 - pTR5 LTR ERV1 -414 2024 741 31 44 0 0 chr5 27400087 27400132 -175685400 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 27400282 27400303 -175685229 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 27400390 27400438 -175685094 + AT_rich Low_complexity Low_complexity 1 48 0 236 319 0 14 chr5 27401327 27401396 -175684136 + L1MC3 LINE L1 140 207 -6357 1770 142 9 41 chr5 27401400 27401717 -175683815 - AluSx SINE Alu -5 307 1 416 233 0 9 chr5 27401724 27401840 -175683692 + GA-rich Low_complexity Low_complexity 3 117 0 283 254 0 16 chr5 27401917 27401980 -175683552 + L1MC3 LINE L1 499 560 -5485 1064 281 45 36 chr5 27402085 27402904 -175682628 + L1MC3 LINE L1 572 1407 -4852 * 1139 265 106 15 chr5 27402901 27403924 -175681608 + L1MC3 LINE L1 2206 3323 -3241 6812 158 36 9 chr5 27403944 27405207 -175680325 - HSMAR2 DNA Mariner -1 1301 4 869 254 46 23 chr5 27405213 27405473 -175680059 + Tigger3(Golem) DNA MER2_type 2764 3029 0 401 230 42 24 chr5 27405473 27405638 -175679894 - L1M4 LINE L1 -3035 3111 2944 682 149 0 33 chr5 27405652 27405773 -175679759 - Tigger3(Golem) DNA MER2_type -266 2763 2647 1521 269 86 29 chr5 27405779 27406638 -175678894 + L1MC3 LINE L1 4277 5184 -1380 1489 239 119 35 chr5 27406640 27406841 -175678691 + L1MC3 LINE L1 5319 5502 -1062 2487 126 0 3 chr5 27406841 27407197 -175678335 + THE1A LTR MaLR 1 355 0 10772 116 7 4 chr5 27407197 27408772 -175676760 + THE1A-int LTR MaLR 1 1580 0 2444 119 6 0 chr5 27408772 27409125 -175676407 + THE1A LTR MaLR 1 355 0 1489 239 119 35 chr5 27409125 27409784 -175675748 + L1MC3 LINE L1 5501 5739 -825 11408 227 39 21 chr5 27409797 27411897 -175673635 + L1MA3 LINE L1 2215 4420 -1885 826 203 0 25 chr5 27411897 27412060 -175673472 + FRAM SINE Alu 1 159 -7 11408 227 39 21 chr5 27412060 27413980 -175671552 + L1MA3 LINE L1 4420 6303 -2 1008 234 58 24 chr5 27413998 27414327 -175671205 + L1MC3 LINE L1 6257 6596 -1607 448 264 137 22 chr5 27414319 27414815 -175670717 + L1M4 LINE L1 3122 3674 -2472 * 299 171 48 6 chr5 27414921 27415034 -175670498 + L1M4 LINE L1 3867 3977 -2169 1582 267 55 70 chr5 27415037 27416469 -175669063 + L1M4 LINE L1 4240 5644 -530 417 224 24 0 chr5 27416469 27416554 -175668978 - Tigger5 DNA MER2_type 0 2323 2237 21 36 0 0 chr5 27416927 27416955 -175668577 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 27416962 27416990 -175668542 + AT_rich Low_complexity Low_complexity 1 28 0 1262 109 6 0 chr5 27417142 27417316 -175668216 - AluSc SINE Alu -89 220 46 235 173 19 19 chr5 27417410 27417462 -175668070 + CT-rich Low_complexity Low_complexity 2 53 0 264 270 0 0 chr5 27417573 27417647 -175667885 - MER104 DNA Tc2 -71 109 36 2150 94 40 12 chr5 27417679 27418008 -175667524 - L1PA13 LINE L1 -9 6154 5817 922 192 100 78 chr5 27418278 27418559 -175666973 - AluJb SINE Alu -15 287 1 222 20 20 82 chr5 27418634 27418683 -175666849 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 27 49 0 0 chr5 27419094 27419135 -175666397 + AT_rich Low_complexity Low_complexity 1 41 0 423 0 0 0 chr5 27419619 27419666 -175665866 + (GA)n Simple_repeat Simple_repeat 1 47 0 301 152 0 0 chr5 27419924 27419970 -175665562 + MER57A LTR ERV1 177 222 -181 266 300 13 1 chr5 27420142 27420224 -175665308 + MER5A DNA MER1_type 22 99 -79 216 67 0 0 chr5 27420323 27420353 -175665179 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1096 171 40 6 chr5 27420363 27420682 -175664850 + MSTA LTR MaLR 1 424 -4 553 205 0 33 chr5 27420682 27420804 -175664728 - FLAM_C SINE Alu -25 118 1 324 0 0 0 chr5 27421525 27421561 -175663971 + (TC)n Simple_repeat Simple_repeat 1 36 0 360 43 0 0 chr5 27421733 27421779 -175663753 + (TA)n Simple_repeat Simple_repeat 1 46 0 26 0 0 0 chr5 27422071 27422097 -175663435 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr5 27422507 27422551 -175662981 + AT_rich Low_complexity Low_complexity 1 44 0 227 197 45 15 chr5 27423015 27423081 -175662451 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 4625 62 3 2 chr5 27423207 27423847 -175661685 + L1PA7 LINE L1 5551 6154 0 1072 149 0 23 chr5 27423867 27424041 -175661491 + AluSg/x SINE Alu 129 298 -14 1930 155 0 0 chr5 27424051 27424341 -175661191 + AluSx SINE Alu 1 290 -22 2530 104 6 3 chr5 27424351 27424705 -175660827 + THE1A LTR MaLR 1 355 0 9898 109 73 0 chr5 27424705 27426177 -175659355 + THE1A-int LTR MaLR 1 1580 0 2623 99 3 0 chr5 27426177 27426531 -175659001 + THE1A LTR MaLR 1 355 0 2048 159 11 11 chr5 27426602 27426980 -175658552 + MER65A LTR ERV1 40 417 -28 29 47 0 0 chr5 27427707 27427750 -175657782 + AT_rich Low_complexity Low_complexity 1 43 0 652 283 48 53 chr5 27428346 27428781 -175656751 + L1ME1 LINE L1 4791 5223 -923 1469 224 102 100 chr5 27428802 27429496 -175656036 + L1ME1 LINE L1 5285 5962 -204 2199 124 0 10 chr5 27429496 27429810 -175655722 + AluSq SINE Alu 3 313 0 1469 224 102 100 chr5 27429810 27430005 -175655527 + L1ME1 LINE L1 5962 6155 -11 775 152 41 7 chr5 27430651 27430796 -175654736 + L1M2 LINE L1 5444 5593 -719 2216 227 98 73 chr5 27430809 27431218 -175654314 - L1PA15 LINE L1 -5 6160 5763 637 118 29 0 chr5 27431218 27431320 -175654212 - THE1C LTR MaLR -1 374 270 2216 227 98 73 chr5 27431320 27432036 -175653496 - L1PA15 LINE L1 -402 5763 4906 3546 36 32 0 chr5 27432054 27432496 -175653036 - L1PA4 LINE L1 -8 6147 5692 12879 30 1 2 chr5 27432497 27434383 -175651149 + L1PA4 LINE L1 3841 5722 -433 3445 232 14 11 chr5 27434363 27435224 -175650308 - L1 LINE L1 -1227 4919 4056 * 1981 173 26 0 chr5 27436727 27437079 -175648453 + THE1B LTR MaLR 1 361 -3 21 82 0 0 chr5 27437666 27437715 -175647817 + AT_rich Low_complexity Low_complexity 1 49 0 1779 93 8 31 chr5 27438015 27438272 -175647260 - AluY SINE Alu -9 302 52 1046 179 24 0 chr5 27438402 27438609 -175646923 - Tigger1 DNA MER2_type -4 2414 2203 718 195 0 0 chr5 27438611 27438734 -175646798 - Tigger1 DNA MER2_type -2282 136 14 3660 65 6 68 chr5 27438768 27439309 -175646223 - L1PA7 LINE L1 -12 6142 5636 22 0 0 0 chr5 27439685 27439707 -175645825 + AT_rich Low_complexity Low_complexity 1 22 0 2393 4 83 0 chr5 27440149 27440427 -175645105 - AluY SINE Alu -10 301 1 23 0 0 0 chr5 27441314 27441337 -175644195 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr5 27441814 27441842 -175643690 + AT_rich Low_complexity Low_complexity 1 28 0 40 83 0 0 chr5 27441925 27442021 -175643511 + AT_rich Low_complexity Low_complexity 1 96 0 1481 101 0 5 chr5 27442496 27442694 -175642838 - AluSq SINE Alu -15 298 102 481 241 8 72 chr5 27444920 27445156 -175640376 - L1MA9 LINE L1 -40 6272 6052 908 207 11 2 chr5 27445157 27449094 -175636438 - ALR/Alpha Satellite centromeric 0 3971 1 208 176 0 59 chr5 27449105 27449173 -175636359 + (TA)n Simple_repeat Simple_repeat 2 65 0 827 236 7 3 chr5 27449173 27451414 -175634118 - ALR/Alpha Satellite centromeric -5 2251 1 925 221 11 4 chr5 27451429 27455084 -175630448 - ALR/Alpha Satellite centromeric 0 3678 1 878 223 6 2 chr5 27455096 27456445 -175629087 - ALR/Alpha Satellite centromeric 0 1355 1 885 227 6 4 chr5 27456462 27457274 -175628258 - ALR/Alpha Satellite centromeric -4 813 1 6200 79 5 3 chr5 27457275 27458709 -175626823 + L1PA7 LINE L1 4606 6044 -110 996 212 13 4 chr5 27458709 27463143 -175622389 - ALR/Alpha Satellite centromeric 0 6650 1836 2430 72 3 0 chr5 27463143 27463447 -175622085 + AluY SINE Alu 1 305 -6 996 212 13 4 chr5 27463447 27465300 -175620232 - ALR/Alpha Satellite centromeric -4814 1836 1 936 142 65 0 chr5 27465870 27466025 -175619507 + AluSg/x SINE Alu 134 298 -14 23 33 0 0 chr5 27466257 27466287 -175619245 + AT_rich Low_complexity Low_complexity 1 30 0 3882 213 28 44 chr5 27466369 27468056 -175617476 - L1MA9 LINE L1 -38 6274 4561 1981 132 7 3 chr5 27468056 27468352 -175617180 + AluSx SINE Alu 1 297 -15 3882 213 28 44 chr5 27468352 27468513 -175617019 - L1MA9 LINE L1 -1751 4561 4399 1613 143 42 65 chr5 27468513 27468732 -175616800 - THE1C LTR MaLR 0 375 167 2539 27 3 0 chr5 27468732 27469027 -175616505 + AluY SINE Alu 1 296 -15 1613 143 42 65 chr5 27469027 27469191 -175616341 - THE1C LTR MaLR -208 167 1 3882 213 28 44 chr5 27469191 27469440 -175616092 - L1MA9 LINE L1 -1913 4399 4215 2094 113 3 13 chr5 27469766 27470076 -175615456 + AluSx SINE Alu 1 307 -5 3881 186 17 13 chr5 27470174 27470952 -175614580 - L1PB4 LINE L1 -14 6142 5362 196 50 0 50 chr5 27471180 27471220 -175614312 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 2679 186 8 2 chr5 27471224 27471707 -175613825 - THE1C-int LTR MaLR -124 1527 1042 294 132 0 0 chr5 27471712 27471765 -175613767 + (CA)n Simple_repeat Simple_repeat 1 53 0 25 51 0 0 chr5 27471983 27472022 -175613510 + AT_rich Low_complexity Low_complexity 1 39 0 204 40 0 0 chr5 27472268 27472293 -175613239 + (T)n Simple_repeat Simple_repeat 1 25 0 465 269 25 0 chr5 27475703 27475822 -175609710 - MIR SINE MIR -107 155 34 1819 178 3 13 chr5 27475877 27476186 -175609346 - AluSx SINE Alu -4 308 3 1576 179 7 23 chr5 27476268 27476569 -175608963 - AluJo SINE Alu -12 300 5 696 257 34 63 chr5 27476662 27476899 -175608633 + MSTD LTR MaLR 160 389 -7 255 103 0 0 chr5 27477337 27477376 -175608156 + (TG)n Simple_repeat Simple_repeat 2 40 0 369 0 0 0 chr5 27477447 27477488 -175608044 + (CA)n Simple_repeat Simple_repeat 2 42 0 634 157 39 39 chr5 27477845 27477998 -175607534 - L1MA5 LINE L1 -5 6295 6143 1978 208 5 5 chr5 27478008 27478407 -175607125 - L1PB4 LINE L1 -1229 4917 4519 1381 188 7 57 chr5 27478404 27478810 -175606722 - L1P LINE L1 -915 5231 4864 * 696 150 7 52 chr5 27478810 27478959 -175606573 + L1MA10 LINE L1 6178 6323 -11 21 57 0 0 chr5 27479084 27479119 -175606413 + AT_rich Low_complexity Low_complexity 1 35 0 332 221 15 15 chr5 27479531 27479667 -175605865 + (TA)n Simple_repeat Simple_repeat 2 137 0 4208 200 27 17 chr5 27480339 27480650 -175604882 + L1P4 LINE L1 4271 4578 -1588 1687 151 76 25 chr5 27480650 27481007 -175604525 - THE1C LTR MaLR 0 375 1 4208 200 27 17 chr5 27481007 27482103 -175603429 + L1P4 LINE L1 4578 5687 -479 425 229 21 0 chr5 27482109 27482205 -175603327 - AluJ/FLAM SINE Alu -213 99 2 23 33 0 0 chr5 27482442 27482472 -175603060 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr5 27482598 27482636 -175602896 + AT_rich Low_complexity Low_complexity 1 38 0 376 347 12 12 chr5 27482699 27482775 -175602757 + GA-rich Low_complexity Low_complexity 3 78 -91 2418 64 0 0 chr5 27482775 27483070 -175602462 + AluY SINE Alu 1 295 -16 376 347 12 12 chr5 27483070 27483160 -175602372 + GA-rich Low_complexity Low_complexity 77 169 0 331 233 22 0 chr5 27483491 27483581 -175601951 - HSMAR2 DNA Mariner -2 1300 1209 281 178 0 0 chr5 27483569 27483614 -175601918 - Alu SINE Alu -256 45 1 * 12893 93 26 13 chr5 27483614 27485542 -175599990 - LTR2-int LTR ERV1 -1874 3343 1391 2465 185 17 62 chr5 27485517 27485547 -175599985 - LTR2-int LTR ERV1 -4650 567 537 * 1260 227 125 10 chr5 27485547 27485948 -175599584 - LTR2 LTR ERV1 0 449 3 2465 185 17 62 chr5 27485948 27486511 -175599021 - LTR2-int LTR ERV1 -4680 537 1 1649 189 3 66 chr5 27486511 27486877 -175598655 - MER61A LTR ERV1 0 343 1 893 117 61 104 chr5 27486877 27486996 -175598536 - HSMAR2 DNA Mariner -1080 222 99 2109 75 0 0 chr5 27486996 27487263 -175598269 + AluY SINE Alu 40 306 -5 893 117 61 104 chr5 27487263 27487322 -175598210 - HSMAR2 DNA Mariner -1203 99 53 1885 120 29 11 chr5 27487322 27487627 -175597905 - AluSc SINE Alu 0 310 1 893 117 61 104 chr5 27487627 27487676 -175597856 - HSMAR2 DNA Mariner -1249 53 3 336 127 0 0 chr5 27487678 27487733 -175597799 + (TG)n Simple_repeat Simple_repeat 1 55 0 1581 184 3 14 chr5 27488111 27488394 -175597138 - AluJb SINE Alu -22 290 11 256 269 32 21 chr5 27488536 27488629 -175596903 - HsTC2 DNA Tc2 -5 1893 1800 318 300 14 36 chr5 27488641 27488781 -175596751 - HsTC2 DNA Tc2 -309 1589 1277 21 71 0 0 chr5 27488782 27488824 -175596708 + AT_rich Low_complexity Low_complexity 1 42 0 23 68 0 0 chr5 27489209 27489253 -175596279 + AT_rich Low_complexity Low_complexity 1 44 0 417 259 6 82 chr5 27489287 27489457 -175596075 + LTR16A LTR ERVL 35 191 -259 29 28 0 0 chr5 27489965 27490001 -175595531 + AT_rich Low_complexity Low_complexity 1 36 0 226 229 66 0 chr5 27490492 27490553 -175594979 - MLT1H LTR MaLR -6 543 479 210 37 0 0 chr5 27490954 27490981 -175594551 + (TG)n Simple_repeat Simple_repeat 2 28 0 3663 261 28 37 chr5 27491430 27491855 -175593677 + L1 LINE L1 1978 2405 -3741 2023 152 0 0 chr5 27491855 27492152 -175593380 - AluSx SINE Alu -15 297 1 3663 261 28 37 chr5 27492152 27493303 -175592229 + L1 LINE L1 2405 3510 -2636 * 3747 109 0 28 chr5 27493302 27493881 -175591651 - L1PA7 LINE L1 -3538 2608 2046 18642 103 1 12 chr5 27493882 27497424 -175588108 + L1PA7 LINE L1 2606 6152 -2 1260 236 21 41 chr5 27497424 27497763 -175587769 + L1PA16 LINE L1 3780 4111 -2035 4820 187 27 24 chr5 27497763 27499167 -175586365 + L1PA16 LINE L1 4763 6163 -3 22 70 0 0 chr5 27499178 27499221 -175586311 + AT_rich Low_complexity Low_complexity 1 43 0 197 354 163 26 chr5 27499295 27499761 -175585771 - L2 LINE L2 -693 2621 2092 21 0 0 0 chr5 27500904 27500925 -175584607 + AT_rich Low_complexity Low_complexity 1 21 0 305 238 0 0 chr5 27501166 27501246 -175584286 - MIR SINE MIR 0 262 183 29 0 0 0 chr5 27501374 27501403 -175584129 + AT_rich Low_complexity Low_complexity 1 29 0 8034 157 122 23 chr5 27502812 27503005 -175582527 - Tigger1 DNA MER2_type -1 2417 2245 1507 176 6 73 chr5 27503005 27503335 -175582197 + AluJb SINE Alu 2 309 -3 8034 157 122 23 chr5 27503335 27504811 -175580721 - Tigger1 DNA MER2_type -173 2245 582 29 0 0 0 chr5 27504811 27504840 -175580692 + AT_rich Low_complexity Low_complexity 1 29 0 4401 128 28 5 chr5 27504905 27505657 -175579875 - L1MA4A LINE L1 0 6303 5535 213 316 13 26 chr5 27506163 27506239 -175579293 + L2 LINE L2 3198 3272 0 4364 185 45 54 chr5 27507116 27508346 -175577186 - L1MA10 LINE L1 -4 6330 5103 1669 116 3 104 chr5 27508427 27508772 -175576760 + L1PB1 LINE L1 5836 6145 -6 23 33 0 0 chr5 27509101 27509131 -175576401 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr5 27509436 27509471 -175576061 + AT_rich Low_complexity Low_complexity 1 35 0 223 287 59 40 chr5 27509577 27509678 -175575854 - L2 LINE L2 -11 3302 3200 235 221 0 19 chr5 27509942 27510046 -175575486 + GA-rich Low_complexity Low_complexity 3 104 0 27 62 0 0 chr5 27510556 27510604 -175574928 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr5 27511588 27511611 -175573921 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 27511725 27511747 -175573785 + AT_rich Low_complexity Low_complexity 1 22 0 949 276 22 60 chr5 27511812 27512225 -175573307 + MLT2C1 LTR ERVL 1 397 0 317 325 0 17 chr5 27512226 27512343 -175573189 + ERVL-C1 LTR ERVL 3 117 -5647 1019 251 45 57 chr5 27512498 27512852 -175572680 - MLT1B LTR MaLR 0 390 41 822 345 29 11 chr5 27512907 27513258 -175572274 + ERVL-C1 LTR ERVL 346 702 -5062 789 270 72 4 chr5 27513277 27513540 -175571992 + ERVL-C1 LTR ERVL 817 1097 -4667 912 177 14 14 chr5 27513579 27513794 -175571738 - L1P LINE L1 -751 5395 5181 7324 203 19 33 chr5 27513895 27515628 -175569904 - L1P LINE L1 -1269 4877 3169 10100 237 55 58 chr5 27515748 27520951 -175564581 - L1PA12 LINE L1 -2391 5193 5 1138 309 34 2 chr5 27520960 27521368 -175564164 + ERVL-C1 LTR ERVL 1101 1521 -4243 3977 119 10 15 chr5 27521369 27521743 -175563789 + LTR43 LTR ERV1 1 372 -230 2395 140 3 3 chr5 27521743 27522107 -175563425 + THE1B LTR MaLR 1 364 0 3977 119 10 15 chr5 27522107 27522335 -175563197 + LTR43 LTR ERV1 372 600 -2 655 239 0 0 chr5 27522379 27522517 -175563015 + ERVL-C1 LTR ERVL 1576 1713 -4051 311 281 31 10 chr5 27522627 27522723 -175562809 + MLT2E LTR ERVL 450 547 -81 2287 149 3 14 chr5 27522742 27523110 -175562422 + THE1B LTR MaLR 1 364 0 3692 96 15 4 chr5 27524317 27524850 -175560682 + L1MA1 LINE L1 5760 6298 -4 22 35 0 0 chr5 27524850 27524879 -175560653 + AT_rich Low_complexity Low_complexity 1 29 0 267 192 164 0 chr5 27525148 27525221 -175560311 + MLT1D LTR MaLR 12 96 -409 363 157 0 71 chr5 27525242 27525312 -175560220 + Tigger3b DNA MER2_type 38 102 -1129 4562 137 53 45 chr5 27525325 27526033 -175559499 + Tigger3b DNA MER2_type 302 1021 -2007 2035 146 3 3 chr5 27526033 27526342 -175559190 + AluSx SINE Alu 1 309 -3 4562 137 53 45 chr5 27526342 27526555 -175558977 + Tigger3b DNA MER2_type 1021 1231 0 287 253 55 22 chr5 27526556 27526647 -175558885 + MLT1D LTR MaLR 102 195 -310 1276 196 42 42 chr5 27526679 27526782 -175558750 + AluJb SINE Alu 17 119 -191 213 39 0 0 chr5 27526782 27526808 -175558724 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1276 196 42 42 chr5 27526808 27526998 -175558534 + AluJb SINE Alu 118 310 0 1883 238 92 23 chr5 27527160 27527690 -175557842 - MER77 LTR ERV1 -4 601 35 2349 161 11 39 chr5 27527826 27528266 -175557266 - MSTC LTR MaLR 0 428 1 1884 189 20 23 chr5 27528422 27528813 -175556719 - MLT1B LTR MaLR 0 390 1 203 103 26 26 chr5 27529167 27529206 -175556326 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr5 27529915 27529937 -175555595 + AT_rich Low_complexity Low_complexity 1 22 0 1960 203 8 6 chr5 27531040 27531404 -175554128 + MLT1A1 LTR MaLR 1 365 0 386 343 42 7 chr5 27532627 27532770 -175552762 - MIR SINE MIR -79 183 36 46 33 0 0 chr5 27534905 27534965 -175550567 + AT_rich Low_complexity Low_complexity 1 60 0 439 302 38 13 chr5 27535033 27535192 -175550340 - LTR33 LTR ERVL -61 460 298 1606 236 37 8 chr5 27535252 27535633 -175549899 - L1M1 LINE L1 -7160 405 14 602 107 0 115 chr5 27535689 27535811 -175549721 - MER50 LTR ERV1 -130 604 497 435 298 107 17 chr5 27536539 27536717 -175548815 - MIR SINE MIR -68 194 1 23 0 0 0 chr5 27537735 27537758 -175547774 + AT_rich Low_complexity Low_complexity 1 23 0 750 239 0 30 chr5 27537769 27537936 -175547596 + FRAM SINE Alu 1 162 -14 698 330 44 39 chr5 27538381 27538432 -175547100 - L2 LINE L2 -2066 1248 1199 432 0 0 0 chr5 27538432 27538480 -175547052 + (TG)n Simple_repeat Simple_repeat 2 49 0 698 330 44 39 chr5 27538480 27538816 -175546716 - L2 LINE L2 -2115 1199 859 213 299 77 80 chr5 27538829 27539103 -175546429 + L2 LINE L2 3028 3300 -13 23 0 0 0 chr5 27539479 27539502 -175546030 + AT_rich Low_complexity Low_complexity 1 23 0 910 196 43 149 chr5 27540552 27540920 -175544612 - MLT1A2 LTR MaLR -42 332 4 1858 174 0 0 chr5 27542055 27542348 -175543184 + AluSx SINE Alu 1 293 -19 5237 115 7 63 chr5 27542499 27543446 -175542086 + L1P LINE L1 3235 4128 -2018 15817 81 2 11 chr5 27543446 27545529 -175540003 - HERVL LTR ERVL -1035 4619 2557 7824 87 35 13 chr5 27545526 27546656 -175538876 - HERVL LTR ERVL -4499 1155 1 * 231 210 32 0 chr5 27546693 27546755 -175538777 - L1MC4 LINE L1 -1339 6703 6640 2723 98 35 8 chr5 27546761 27547159 -175538373 - MLT2A1 LTR ERVL -35 409 1 23 54 0 0 chr5 27547224 27547261 -175538271 + AT_rich Low_complexity Low_complexity 1 37 0 243 0 0 0 chr5 27547600 27547627 -175537905 + (A)n Simple_repeat Simple_repeat 1 27 0 33 0 0 0 chr5 27548034 27548067 -175537465 + AT_rich Low_complexity Low_complexity 1 33 0 2018 141 19 50 chr5 27549881 27550257 -175535275 - THE1B LTR MaLR 0 364 1 10884 115 11 5 chr5 27550257 27551827 -175533705 - THE1B-int LTR MaLR 0 1580 1 960 97 35 7 chr5 27551847 27551991 -175533541 - THE1B LTR MaLR -215 149 2 2145 90 0 31 chr5 27552013 27552331 -175533201 + AluY SINE Alu 1 309 0 455 279 60 34 chr5 27552675 27552944 -175532588 - HAL1b LINE L1 -861 487 212 1101 288 21 37 chr5 27553125 27553504 -175532028 - MLT1D LTR MaLR -111 394 22 2307 93 3 3 chr5 27553840 27554151 -175531381 - AluY SINE Alu 0 311 1 208 227 27 13 chr5 27555135 27555210 -175530322 + (TA)n Simple_repeat Simple_repeat 2 77 0 27 62 0 0 chr5 27555366 27555414 -175530118 + AT_rich Low_complexity Low_complexity 1 48 0 1088 237 63 4 chr5 27555823 27556093 -175529439 + L1MCa LINE L1 29 314 -6112 481 212 51 8 chr5 27556077 27556195 -175529337 - L1MCa LINE L1 -5798 628 506 * 2000 216 40 27 chr5 27556251 27556729 -175528803 + L1MCa LINE L1 315 798 -5628 1475 207 28 3 chr5 27556744 27557034 -175528498 + L1MC1 LINE L1 5432 5728 -605 2084 170 38 19 chr5 27557040 27557460 -175528072 + MSTB1 LTR MaLR 5 364 0 691 159 38 0 chr5 27557460 27557592 -175527940 + L1MC1 LINE L1 5745 5881 -452 35 40 0 40 chr5 27557607 27557682 -175527850 + AT_rich Low_complexity Low_complexity 1 72 0 429 263 62 70 chr5 27558043 27558286 -175527246 + L1MCa LINE L1 3037 3277 -3149 757 283 76 39 chr5 27558318 27558856 -175526676 + L1MCa LINE L1 3459 4016 -2410 2097 125 0 3 chr5 27558966 27559251 -175526281 + AluSx SINE Alu 1 286 -26 330 98 0 0 chr5 27559251 27559302 -175526230 + (CATA)n Simple_repeat Simple_repeat 2 52 0 722 242 32 44 chr5 27560830 27561105 -175524427 + MLT1B LTR MaLR 123 390 0 304 255 64 0 chr5 27561126 27561220 -175524312 - L1MC4 LINE L1 -1328 6714 6615 274 192 14 14 chr5 27561241 27561314 -175524218 + (TA)n Simple_repeat Simple_repeat 2 74 0 387 196 130 7 chr5 27561327 27561465 -175524067 + L1MC4 LINE L1 7014 7168 -874 1033 213 25 43 chr5 27561531 27561808 -175523724 + MLT1A1 LTR MaLR 1 272 -93 196 304 43 0 chr5 27561843 27561912 -175523620 + L2 LINE L2 2006 2077 -1237 2121 128 0 0 chr5 27562071 27562376 -175523156 - AluSx SINE Alu -7 305 1 1725 169 7 7 chr5 27563312 27563608 -175521924 - AluSx SINE Alu -16 296 1 405 0 0 0 chr5 27563681 27563726 -175521806 + (TG)n Simple_repeat Simple_repeat 2 46 0 1388 177 63 37 chr5 27563809 27564108 -175521424 + AluJb SINE Alu 3 309 -3 2243 94 7 0 chr5 27565004 27565290 -175520242 - AluSx SINE Alu -20 292 5 22 35 0 0 chr5 27565470 27565499 -175520033 + AT_rich Low_complexity Low_complexity 1 29 0 759 176 0 55 chr5 27565507 27565689 -175519843 - FAM SINE Alu -3 172 1 256 268 112 6 chr5 27566350 27566529 -175519003 + L1ME4a LINE L1 5745 5942 -179 2151 113 10 0 chr5 27566677 27566968 -175518564 + AluSg SINE Alu 1 294 -16 859 299 95 38 chr5 27567143 27567587 -175517945 + MLT1J LTR MaLR 32 500 -11 1093 135 5 25 chr5 27567898 27568098 -175517434 - L1P LINE L1 -2149 3997 3802 1260 131 5 15 chr5 27568099 27568305 -175517227 - L1P LINE L1 -3488 2658 2455 393 175 25 0 chr5 27568348 27568428 -175517104 - L1P LINE L1 -3825 2321 2240 2558 98 3 11 chr5 27568428 27568786 -175516746 - THE1A LTR MaLR 0 355 1 10961 105 3 9 chr5 27568786 27570375 -175515157 - THE1A-int LTR MaLR 0 1580 1 2358 77 15 6 chr5 27570375 27570702 -175514830 - THE1A LTR MaLR 0 355 26 256 177 25 13 chr5 27571720 27571871 -175513661 + (TA)n Simple_repeat Simple_repeat 1 152 0 309 253 26 103 chr5 27571913 27572107 -175513425 - MLT1J2 LTR MaLR -8 442 264 263 231 24 0 chr5 27572171 27572230 -175513302 - MLT1J LTR MaLR -287 192 101 181 397 103 22 chr5 27572407 27572543 -175512989 + L2 LINE L2 3125 3271 -1 507 271 73 7 chr5 27572778 27572929 -175512603 + MIR3 SINE MIR 21 181 -27 315 345 28 5 chr5 27573337 27573500 -175512032 + MIR SINE MIR 20 183 -65 412 296 17 9 chr5 27574584 27574699 -175510833 - L2 LINE L2 -11 3302 3187 1358 181 0 45 chr5 27576664 27576929 -175508603 - AluJo SINE Alu -18 294 42 245 234 31 0 chr5 27583676 27583740 -175501792 + L1ME3A LINE L1 6097 6162 -8 1606 169 7 28 chr5 27584739 27585023 -175500509 + AluJo SINE Alu 13 290 -22 2375 85 7 0 chr5 27585528 27585821 -175499711 + AluSg SINE Alu 1 295 -15 30 0 0 0 chr5 27586032 27586062 -175499470 + AT_rich Low_complexity Low_complexity 1 30 0 1876 148 6 19 chr5 27586075 27586386 -175499146 + AluSx SINE Alu 1 307 -5 313 307 67 22 chr5 27587800 27587979 -175497553 - L2 LINE L2 -512 2802 2616 542 329 50 4 chr5 27588083 27588323 -175497209 - L2 LINE L2 -1899 1415 1165 319 286 161 26 chr5 27590172 27590364 -175495168 + L2 LINE L2 2437 2654 -660 698 201 62 6 chr5 27590421 27590600 -175494932 + MER5A DNA MER1_type 1 189 0 249 250 0 0 chr5 27591221 27591281 -175494251 - L2 LINE L2 -219 3053 2994 238 338 46 28 chr5 27591455 27591875 -175493657 - L2 LINE L2 -467 2847 2361 1816 184 0 3 chr5 27594002 27594296 -175491236 + AluJo SINE Alu 1 293 -19 1623 81 0 5 chr5 27595009 27595231 -175490301 - pTR5 LTR ERV1 -2046 392 172 377 248 10 0 chr5 27595234 27595335 -175490197 - LTR30 LTR ERV1 -80 642 541 1385 137 81 53 chr5 27595336 27595621 -175489911 - pTR5 LTR ERV1 -417 2021 1729 584 129 0 0 chr5 27595904 27595997 -175489535 - AluSg/x SINE Alu 0 309 217 225 211 56 42 chr5 27598367 27598438 -175487094 + LTR16A1 LTR ERVL 59 130 -327 839 223 45 36 chr5 27598488 27598735 -175486797 + LTR16A1 LTR ERVL 209 457 0 887 146 139 6 chr5 27598748 27598913 -175486619 - MER5A DNA MER1_type -2 187 1 2138 145 3 0 chr5 27601429 27601739 -175483793 + AluJo SINE Alu 1 311 -1 2133 114 0 26 chr5 27601739 27602046 -175483486 + AluSx SINE Alu 1 300 -12 386 314 46 66 chr5 27603372 27603429 -175482103 + L1MEc LINE L1 1253 1310 -5086 2260 81 10 17 chr5 27603429 27603724 -175481808 + AluSq SINE Alu 2 294 -19 386 314 46 66 chr5 27603724 27604163 -175481369 + L1MEc LINE L1 1310 1739 -4657 580 180 0 0 chr5 27604477 27604577 -175480955 - LTR12 LTR ERV1 0 714 615 259 314 17 0 chr5 27604579 27604697 -175480835 - LTR30 LTR ERV1 -79 643 524 1406 87 3 176 chr5 27604697 27605009 -175480523 - LTR12 LTR ERV1 -456 258 1 541 278 82 76 chr5 27605071 27605664 -175479868 + L1MEc LINE L1 2180 2741 -3474 2158 81 7 45 chr5 27605664 27605973 -175479559 + AluSg SINE Alu 1 297 -13 541 278 82 76 chr5 27605973 27606249 -175479283 + L1MEc LINE L1 2741 3014 -3201 1385 248 103 59 chr5 27606268 27607219 -175478313 + L1MB8 LINE L1 5193 6175 -3 192 40 0 0 chr5 27607865 27607890 -175477642 + (A)n Simple_repeat Simple_repeat 1 25 0 1555 197 4 4 chr5 27608034 27608313 -175477219 + AluJo SINE Alu 1 279 -33 2306 89 0 13 chr5 27608483 27608785 -175476747 - AluY SINE Alu -13 298 1 2049 119 0 7 chr5 27609035 27609328 -175476204 + AluY SINE Alu 5 295 -16 274 320 25 0 chr5 27609507 27609629 -175475903 - LTR67 LTR ERVL -2 555 431 1539 164 26 44 chr5 27609865 27610255 -175475277 + pTR5 LTR ERV1 743 1125 -1313 187 233 0 0 chr5 27710509 27710552 -175374980 - L2 LINE L2 -8 3305 3263 23 33 0 0 chr5 27710673 27710703 -175374829 + AT_rich Low_complexity Low_complexity 1 30 0 378 0 0 0 chr5 27710736 27710778 -175374754 + (TG)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr5 27710895 27710917 -175374615 + AT_rich Low_complexity Low_complexity 1 22 0 181 258 56 101 chr5 27712587 27712676 -175372856 - MIR SINE MIR -99 163 79 1429 171 50 64 chr5 27713705 27714062 -175371470 + THE1C LTR MaLR 3 354 -21 21 0 0 0 chr5 27714290 27714311 -175371221 + AT_rich Low_complexity Low_complexity 1 21 0 254 309 47 27 chr5 27714618 27714767 -175370765 + MLT1H LTR MaLR 30 181 -368 298 256 73 0 chr5 27715052 27715134 -175370398 - L1MC/D LINE L1 -2338 5470 5383 2320 86 0 10 chr5 27715540 27715841 -175369691 - AluY SINE Alu -13 298 1 21 57 0 0 chr5 27715926 27715961 -175369571 + AT_rich Low_complexity Low_complexity 1 35 0 479 231 189 18 chr5 27716452 27716621 -175368911 + MER58A DNA MER1_type 27 224 0 396 293 95 64 chr5 27716697 27716980 -175368552 - L1MEd LINE L1 -4879 1240 949 223 203 29 29 chr5 27717129 27717198 -175368334 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 16646 205 22 11 chr5 27718766 27722697 -175362835 - L1PA14 LINE L1 -3 7596 3708 1959 134 0 0 chr5 27722697 27722973 -175362559 - AluSg SINE Alu -10 300 25 16646 205 22 11 chr5 27722973 27723119 -175362413 - L1PA14 LINE L1 -3891 3708 3565 204 97 0 0 chr5 27723119 27723150 -175362382 + (TG)n Simple_repeat Simple_repeat 2 32 0 1794 32 9 0 chr5 27723155 27723374 -175362158 - L1PA4 LINE L1 -3 6152 5932 16646 205 22 11 chr5 27723374 27724215 -175361317 - L1PA14 LINE L1 -4037 3562 2617 1525 168 39 13 chr5 27724207 27724660 -175360872 - L1M2 LINE L1 -728 5572 5113 * 251 294 29 0 chr5 27724660 27724728 -175360804 - L1ME LINE L1 -402 5768 5699 723 320 137 22 chr5 27725491 27726084 -175359448 - L2 LINE L2 -1367 1947 1287 326 196 128 0 chr5 27726252 27726354 -175359178 + L1M4 LINE L1 3055 3169 -2977 315 122 0 0 chr5 27727064 27727113 -175358419 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 202 118 0 29 chr5 27727123 27727157 -175358375 + (TTTTC)n Simple_repeat Simple_repeat 4 36 0 205 246 9 64 chr5 27729848 27729958 -175355574 + CT-rich Low_complexity Low_complexity 1 104 0 181 343 14 79 chr5 27731451 27731591 -175353941 - MIR SINE MIR -109 153 23 209 313 62 0 chr5 27732034 27732114 -175353418 - L2 LINE L2 -3 3310 3226 760 97 0 0 chr5 27732218 27732354 -175353178 + AluY SINE Alu 181 316 0 1936 187 36 51 chr5 27734293 27734763 -175350769 + MLT1C LTR MaLR 2 464 -3 193 98 49 0 chr5 27734767 27734808 -175350724 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 2561 105 14 3 chr5 27734887 27735258 -175350274 + THE1C LTR MaLR 1 375 0 2113 118 0 13 chr5 27735591 27735905 -175349627 - AluSq SINE Alu -3 310 1 1977 113 40 0 chr5 27736303 27736607 -175348925 + AluSc SINE Alu 1 293 -16 26 0 0 67 chr5 27737413 27737458 -175348074 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 27737707 27737728 -175347804 + AT_rich Low_complexity Low_complexity 1 21 0 390 234 83 76 chr5 27737836 27738126 -175347406 + MER69 DNA AcHobo 2228 2519 -7 2124 81 3 11 chr5 27738525 27738867 -175346665 + AluY SINE Alu 1 340 0 2593 44 0 16 chr5 27739171 27739487 -175346045 - AluY SINE Alu 0 311 1 222 116 0 0 chr5 27740455 27740498 -175345034 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1448 276 31 71 chr5 27740945 27741492 -175344040 - MLT2B3 LTR ERVL -10 544 20 22 0 0 0 chr5 27741816 27741838 -175343694 + AT_rich Low_complexity Low_complexity 1 22 0 27 62 0 0 chr5 27742447 27742495 -175343037 + AT_rich Low_complexity Low_complexity 1 48 0 485 249 45 51 chr5 27742840 27743017 -175342515 + MER82 DNA MER2_type 362 537 -116 * 703 215 17 57 chr5 27743006 27743183 -175342349 + MER82 DNA MER2_type 483 652 -1 282 160 0 0 chr5 27743217 27743267 -175342265 + (TA)n Simple_repeat Simple_repeat 1 50 0 2147 88 7 20 chr5 27744890 27745186 -175340346 + AluSx SINE Alu 1 292 -20 983 203 162 12 chr5 27745552 27745873 -175339659 + L1MB8 LINE L1 5804 6172 -6 629 222 12 18 chr5 27745952 27746123 -175339409 - LTR37B LTR ERV1 -217 251 82 2359 84 0 13 chr5 27746285 27746595 -175338937 - AluSg SINE Alu -4 306 1 1908 238 17 62 chr5 27746708 27746735 -175338797 - MLT2B1 LTR ERVL -8 512 485 356 0 23 0 chr5 27746735 27746779 -175338753 + (TG)n Simple_repeat Simple_repeat 2 46 0 1908 238 17 62 chr5 27746779 27747218 -175338314 - MLT2B1 LTR ERVL -35 485 70 2359 43 0 0 chr5 27747218 27747494 -175338038 + AluY SINE Alu 23 298 -13 1908 238 17 62 chr5 27747494 27747560 -175337972 - MLT2B1 LTR ERVL -450 70 3 374 298 48 52 chr5 27747778 27748026 -175337506 - MER31-int LTR ERV1 -876 4060 3814 4736 84 9 19 chr5 27748031 27748698 -175336834 - PABL_A LTR ERV1 0 660 1 927 282 157 11 chr5 27749010 27749461 -175336071 + LTR55 LTR ERV 20 536 -12 2356 78 0 0 chr5 27749507 27749802 -175335730 + AluY SINE Alu 1 295 -16 24 0 0 0 chr5 27750485 27750509 -175335023 + AT_rich Low_complexity Low_complexity 1 24 0 1973 152 134 11 chr5 27750938 27751319 -175334213 + MSTA LTR MaLR 1 428 0 9130 153 6 35 chr5 27751321 27752946 -175332586 + MSTA-int LTR MaLR 3 1580 0 1586 197 145 18 chr5 27752946 27753326 -175332206 + MSTA LTR MaLR 1 428 0 2215 101 3 3 chr5 27753441 27753739 -175331793 + AluY SINE Alu 1 298 -13 24 53 0 0 chr5 27753910 27753948 -175331584 + AT_rich Low_complexity Low_complexity 1 38 0 2319 81 0 3 chr5 27754048 27754344 -175331188 - AluY SINE Alu -16 295 1 25 31 0 0 chr5 27754349 27754381 -175331151 + AT_rich Low_complexity Low_complexity 1 32 0 237 65 0 0 chr5 27754975 27755006 -175330526 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 477 0 0 0 chr5 27755049 27755102 -175330430 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 273 169 0 0 chr5 27755115 27755174 -175330358 + GA-rich Low_complexity Low_complexity 2 60 0 730 240 89 36 chr5 27755283 27755642 -175329890 - LTR37B LTR ERV1 -5 463 86 24 67 0 0 chr5 27755707 27755752 -175329780 + AT_rich Low_complexity Low_complexity 1 45 0 659 311 58 48 chr5 27756046 27756394 -175329138 + L1MEc LINE L1 141 495 -5901 4498 157 36 27 chr5 27756394 27757258 -175328274 - MER4D LTR ERV1 0 872 1 659 311 58 48 chr5 27757258 27757324 -175328208 + L1MEc LINE L1 495 559 -5837 465 203 86 48 chr5 27757645 27757832 -175327700 + L1ME LINE L1 5301 5494 -672 1819 145 4 0 chr5 27759071 27759340 -175326192 + AluSx SINE Alu 33 302 -10 361 299 110 16 chr5 27759803 27760057 -175325475 + L2 LINE L2 2934 3211 -102 292 317 108 41 chr5 27760238 27760506 -175325026 - L2 LINE L2 -2954 360 75 2558 65 0 0 chr5 27760653 27760962 -175324570 + AluY SINE Alu 2 310 -1 1385 221 0 41 chr5 27761316 27761633 -175323899 - AluJo SINE Alu -7 305 2 1893 113 3 53 chr5 27762401 27762739 -175322793 - AluSx SINE Alu 0 323 1 270 211 0 0 chr5 27764138 27764190 -175321342 + LTR30 LTR ERV1 1 52 -670 1339 81 46 136 chr5 27764190 27764498 -175321034 + LTR12 LTR ERV1 57 277 -437 322 263 10 0 chr5 27764498 27764597 -175320935 + LTR30 LTR ERV1 544 643 -79 1632 128 4 0 chr5 27764597 27764831 -175320701 + LTR12 LTR ERV1 480 714 0 207 351 79 18 chr5 27764889 27765003 -175320529 - L2 LINE L2 -2503 811 691 286 329 0 7 chr5 27765266 27765418 -175320114 + L1ME LINE L1 4518 4668 -1478 545 172 43 9 chr5 27765651 27765767 -175319765 + L1MA3 LINE L1 14 133 -7432 * 12330 150 40 17 chr5 27765764 27767227 -175318305 + L1MA3 LINE L1 1099 2527 -5038 2285 88 16 3 chr5 27767227 27767533 -175317999 + AluY SINE Alu 1 310 -1 12330 150 40 17 chr5 27767533 27767720 -175317812 + L1MA3 LINE L1 2527 2708 -4857 2007 179 87 5 chr5 27767720 27768144 -175317388 - LOR1b LTR ERV1 -2 459 1 12330 150 40 17 chr5 27768144 27768663 -175316869 + L1MA3 LINE L1 2708 3318 -4247 1242 123 0 0 chr5 27768663 27768842 -175316690 - AluSg/x SINE Alu -3 309 131 183 152 0 0 chr5 27768844 27768890 -175316642 + (TA)n Simple_repeat Simple_repeat 2 47 0 966 108 0 0 chr5 27768893 27769022 -175316510 - AluY SINE Alu -182 129 1 1140 158 76 3 chr5 27769025 27769316 -175316216 + L1MA3 LINE L1 3312 3623 -3942 * 4999 142 14 42 chr5 27769312 27769403 -175316129 + L1MA3 LINE L1 6805 6897 -827 2174 89 4 4 chr5 27769403 27769720 -175315812 + AluSc SINE Alu 1 317 0 4999 142 14 42 chr5 27769720 27770572 -175314960 + L1MA3 LINE L1 6897 7724 0 325 295 93 51 chr5 27770976 27771125 -175314407 + L1ME LINE L1 5323 5487 -677 783 261 84 72 chr5 27771125 27771394 -175314138 - MLT1D LTR MaLR 0 505 226 186 43 0 0 chr5 27771394 27771417 -175314115 + (CACAT)n Simple_repeat Simple_repeat 5 27 0 783 261 84 72 chr5 27771417 27771646 -175313886 - MLT1D LTR MaLR -279 226 1 325 295 93 51 chr5 27771646 27771733 -175313799 + L1ME LINE L1 5487 5569 -595 280 127 62 49 chr5 27772026 27772105 -175313427 + L1M4 LINE L1 5767 5845 -309 670 271 14 14 chr5 27772472 27772682 -175312850 - MER58A DNA MER1_type -8 216 7 286 310 11 0 chr5 27774299 27774386 -175311146 + L2 LINE L2 3221 3308 -5 22 0 0 0 chr5 27774598 27774620 -175310912 + AT_rich Low_complexity Low_complexity 1 22 0 3886 198 39 18 chr5 27774643 27775545 -175309987 + L1MC2 LINE L1 5423 6343 -1 1398 220 0 31 chr5 27775563 27775854 -175309678 + AluJo SINE Alu 1 282 -30 495 248 169 31 chr5 27776310 27776674 -175308858 + MER57A LTR ERV1 22 403 0 1674 176 66 55 chr5 27777330 27777768 -175307764 - MER65A LTR ERV1 -2 443 1 1690 265 35 25 chr5 27777769 27777969 -175307563 - MER65A-int LTR ERV1 -1 4870 4673 2526 123 0 6 chr5 27777969 27778335 -175307197 + THE1B LTR MaLR 1 364 0 10491 115 12 27 chr5 27778335 27779934 -175305598 + THE1B-int LTR MaLR 1 1576 -4 2364 116 52 0 chr5 27779940 27780284 -175305248 + THE1B LTR MaLR 3 364 0 1690 265 35 25 chr5 27780284 27780596 -175304936 - MER65A-int LTR ERV1 -202 4669 4345 2782 255 61 57 chr5 27780694 27781295 -175304237 - MER65A-int LTR ERV1 -699 4172 3562 2437 77 0 6 chr5 27781295 27781606 -175303926 + AluY SINE Alu 1 309 -2 2782 255 61 57 chr5 27781606 27782181 -175303351 - MER65A-int LTR ERV1 -1309 3562 2991 2127 180 82 18 chr5 27782196 27782647 -175302885 - LTR1B LTR ERV1 0 826 347 1840 133 71 40 chr5 27782784 27783137 -175302395 + LTR10A LTR ERV1 185 548 -61 712 222 157 22 chr5 27783150 27783380 -175302152 - LTR1B LTR ERV1 -476 350 90 876 188 92 125 chr5 27783382 27784425 -175301107 - MER65A-int LTR ERV1 -1586 4745 2528 321 236 87 55 chr5 27784506 27784633 -175300899 - MER65A-int LTR ERV1 -2867 3731 3601 664 228 31 108 chr5 27785043 27785678 -175299854 - MER65A-int LTR ERV1 -2816 2307 1541 1691 190 91 79 chr5 27785800 27786521 -175299011 - MER65A-int LTR ERV1 -5903 1913 954 329 211 0 13 chr5 27786521 27786597 -175298935 - LTR57-int LTR ERVL -4588 755 681 4070 136 40 61 chr5 27786657 27787427 -175298105 + LTR1 LTR ERV1 32 785 0 1024 170 44 126 chr5 27787427 27787857 -175297675 - MER65A-int LTR ERV1 -3319 1552 1158 422 230 3 90 chr5 27788058 27788216 -175297316 - MER65A-int LTR ERV1 -890 896 689 465 216 11 63 chr5 27788282 27788411 -175297121 + MER54B LTR ERVL 95 195 -598 2043 207 130 56 chr5 27788411 27789178 -175296354 + LTR1B LTR ERV1 1 824 -2 465 216 11 63 chr5 27789178 27789213 -175296319 + MER54B LTR ERVL 195 230 -563 978 236 33 61 chr5 27789248 27789817 -175295715 - MER65A-int LTR ERV1 -4231 640 35 1841 183 64 21 chr5 27789854 27789981 -175295551 - MER65A LTR ERV1 -5 440 320 2038 134 6 16 chr5 27789981 27790294 -175295238 + AluSx SINE Alu 1 310 -2 1841 183 64 21 chr5 27790294 27790586 -175294946 - MER65A LTR ERV1 -125 320 3 1037 272 94 3 chr5 27790598 27790940 -175294592 + MLT1A2 LTR MaLR 1 373 -1 918 185 7 0 chr5 27790964 27791115 -175294417 + FRAM SINE Alu 14 165 -11 23 0 0 0 chr5 27791494 27791517 -175294015 + AT_rich Low_complexity Low_complexity 1 23 0 325 277 201 25 chr5 27791564 27791723 -175293809 - L1ME LINE L1 -358 5812 5626 238 188 14 58 chr5 27791831 27791900 -175293632 - L1MEc LINE L1 -4775 1621 1556 246 158 50 25 chr5 27792862 27792982 -175292550 + (TA)n Simple_repeat Simple_repeat 2 124 0 182 191 76 0 chr5 27793009 27793140 -175292392 + (TA)n Simple_repeat Simple_repeat 1 141 0 579 263 62 4 chr5 27793439 27793699 -175291833 - L1MCc LINE L1 -3748 3193 2918 8567 211 86 19 chr5 27793810 27795610 -175289922 - L1MA8 LINE L1 -279 6012 4334 2043 139 0 0 chr5 27795610 27795898 -175289634 - AluSc SINE Alu -19 290 3 8567 211 86 19 chr5 27795898 27796503 -175289029 - L1MA8 LINE L1 -1957 4334 3771 2653 99 0 0 chr5 27796503 27796858 -175288674 + THE1A LTR MaLR 1 355 0 8567 211 86 19 chr5 27796858 27797593 -175287939 - L1MA8 LINE L1 -2520 3771 3087 1466 199 0 70 chr5 27797593 27797920 -175287612 + AluJo SINE Alu 1 304 -8 201 94 0 0 chr5 27797920 27797952 -175287580 + (TA)n Simple_repeat Simple_repeat 2 33 0 8567 211 86 19 chr5 27797952 27798014 -175287518 - L1MA8 LINE L1 -3203 3088 2584 427 276 130 80 chr5 27798021 27798247 -175287285 - L1MCc LINE L1 -4258 2864 2611 2226 77 0 11 chr5 27798247 27798576 -175286956 + AluY SINE Alu 1 326 0 427 276 130 80 chr5 27798576 27798710 -175286822 - L1MCc LINE L1 -4511 2611 2485 1190 282 58 50 chr5 27798713 27799687 -175285845 - L1MCc LINE L1 -4578 2363 1272 2486 74 0 0 chr5 27799687 27799997 -175285535 - AluY SINE Alu -1 310 1 1190 282 58 50 chr5 27799997 27800124 -175285408 - L1MCc LINE L1 -5669 1272 1147 226 311 33 49 chr5 27800195 27800317 -175285215 - L1MCc LINE L1 -5433 990 871 859 256 123 102 chr5 27801593 27802082 -175283450 - MLT1E LTR MaLR -2 591 67 * 5740 144 14 37 chr5 27802070 27803113 -175282419 + Tigger1 DNA MER2_type 782 1800 -618 2794 173 19 0 chr5 27803137 27803623 -175281909 + Tigger1 DNA MER2_type 1923 2417 -1 21 57 0 0 chr5 27803624 27803659 -175281873 + AT_rich Low_complexity Low_complexity 1 35 0 2361 94 0 0 chr5 27803783 27804092 -175281440 + AluY SINE Alu 1 309 -2 23 0 10 0 chr5 27804634 27804702 -175280830 + AT_rich Low_complexity Low_complexity 1 23 0 1994 133 20 0 chr5 27804860 27805154 -175280378 + AluSx SINE Alu 5 304 -8 2385 75 0 3 chr5 27805436 27805743 -175279789 + AluY SINE Alu 6 311 0 432 0 0 0 chr5 27805747 27805795 -175279737 + (TA)n Simple_repeat Simple_repeat 2 49 0 23 54 0 0 chr5 27805866 27805903 -175279629 + AT_rich Low_complexity Low_complexity 1 37 0 3548 153 59 26 chr5 27805903 27806257 -175279275 - L1PB4 LINE L1 -3 6153 5812 288 0 0 0 chr5 27806257 27806289 -175279243 + (TA)n Simple_repeat Simple_repeat 1 32 0 3548 153 59 26 chr5 27806289 27806659 -175278873 - L1PB4 LINE L1 -344 5812 5405 2250 215 15 17 chr5 27806659 27806964 -175278568 + L1 LINE L1 3164 3469 -2677 2598 17 0 10 chr5 27806964 27807257 -175278275 + AluYa5 SINE Alu 1 290 -21 2250 215 15 17 chr5 27807257 27807546 -175277986 + L1 LINE L1 3469 3757 -2389 * 14310 27 1 0 chr5 27807544 27809243 -175276289 - L1P LINE L1 -1092 5054 3355 4281 203 15 17 chr5 27809244 27810145 -175275387 + L1 LINE L1 3753 4653 -1493 4702 96 23 25 chr5 27810145 27810833 -175274699 + LTR12 LTR ERV1 1 687 -1 4281 203 15 17 chr5 27810833 27810956 -175274576 + L1 LINE L1 4653 4775 -1371 1927 129 7 42 chr5 27811395 27811522 -175274010 + AluSx SINE Alu 11 141 -171 2340 91 0 7 chr5 27811522 27811831 -175273701 + AluY SINE Alu 3 309 -2 1927 129 7 42 chr5 27811831 27812012 -175273520 + AluSx SINE Alu 141 308 -4 647 267 88 58 chr5 27812245 27812811 -175272721 - L1M4c LINE L1 -4563 2325 1804 248 200 64 120 chr5 27812810 27812935 -175272597 - L1M4c LINE L1 -3393 3564 3447 * 1274 255 40 57 chr5 27812959 27813605 -175271927 - L1M4c LINE L1 -5104 1751 1123 335 260 36 88 chr5 27813651 27813843 -175271689 - L1M4c LINE L1 -5916 943 762 21 0 0 0 chr5 27813922 27813943 -175271589 + AT_rich Low_complexity Low_complexity 1 21 0 33 0 0 0 chr5 27814188 27814221 -175271311 + AT_rich Low_complexity Low_complexity 1 33 0 2109 137 53 8 chr5 27814232 27814591 -175270941 + THE1C LTR MaLR 1 375 0 2519 34 0 0 chr5 27815019 27815342 -175270190 + L1PA4 LINE L1 5846 6168 0 1943 162 7 0 chr5 27815346 27815655 -175269877 + AluSq SINE Alu 1 311 -2 260 109 0 22 chr5 27815655 27815701 -175269831 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 40 49 0 0 chr5 27815791 27815852 -175269680 + AT_rich Low_complexity Low_complexity 1 61 0 3360 171 52 27 chr5 27816638 27817786 -175267746 + pTR5 LTR ERV1 5 581 -133 1265 215 83 12 chr5 27818403 27818728 -175266804 - MER7A DNA MER2_type 0 346 1 627 359 52 20 chr5 27819284 27819788 -175265744 - HERV16 LTR ERVL -2096 2900 2381 366 354 83 43 chr5 27819918 27820339 -175265193 - HERV16 LTR ERVL -3481 2173 1736 1611 202 50 22 chr5 27822081 27822442 -175263090 - MLT1B LTR MaLR 0 390 20 1977 203 129 28 chr5 27822777 27822999 -175262533 - MER39 LTR ERV1 0 707 509 2515 66 0 0 chr5 27822999 27823301 -175262231 + AluY SINE Alu 1 302 -9 1977 203 129 28 chr5 27823301 27823678 -175261854 - MER39 LTR ERV1 -198 509 7 526 248 40 24 chr5 27823686 27823811 -175261721 + MER58B DNA MER1_type 198 324 -17 23 0 0 0 chr5 27824665 27824688 -175260844 + AT_rich Low_complexity Low_complexity 1 23 0 2177 200 7 99 chr5 27824813 27825377 -175260155 + MLT2B2 LTR ERVL 1 512 -3 2029 126 7 10 chr5 27826023 27826325 -175259207 + AluSg SINE Alu 9 309 -1 4148 188 24 20 chr5 27826338 27827380 -175258152 + L1MB1 LINE L1 5109 6160 -8 619 260 18 6 chr5 27827416 27827585 -175257947 + L1MA10 LINE L1 6156 6326 -8 23 0 0 0 chr5 27828694 27828717 -175256815 + AT_rich Low_complexity Low_complexity 1 23 0 857 191 53 5 chr5 27828768 27828957 -175256575 + MER2 DNA MER2_type 13 210 -135 26 0 0 0 chr5 27829131 27829157 -175256375 + AT_rich Low_complexity Low_complexity 1 26 0 2381 70 0 19 chr5 27829667 27829979 -175255553 - AluY SINE Alu 0 311 6 205 200 0 0 chr5 27830207 27830247 -175255285 + T-rich Low_complexity Low_complexity 1 40 0 323 267 81 0 chr5 27831020 27831106 -175254426 + L2 LINE L2 2216 2308 -1006 489 309 142 27 chr5 27831237 27831692 -175253840 - L2 LINE L2 -164 3149 2657 223 358 126 19 chr5 27831731 27831938 -175253594 + L2 LINE L2 2378 2606 -708 777 340 38 8 chr5 27832352 27832614 -175252918 + L1PA13 LINE L1 1 270 -6517 332 279 114 80 chr5 27832596 27832797 -175252735 + L1PA13 LINE L1 555 762 -6025 * 9183 263 20 24 chr5 27832805 27836404 -175249128 + L1PA13 LINE L1 1272 4859 -1938 4069 99 2 4 chr5 27836404 27836958 -175248574 + THE1B-int LTR MaLR 1016 1568 -12 1976 132 35 59 chr5 27836971 27837342 -175248190 + THE1B LTR MaLR 3 364 0 2849 156 15 35 chr5 27837342 27837869 -175247663 + L1PA15 LINE L1 5648 6165 0 21 0 0 0 chr5 27838291 27838312 -175247220 + AT_rich Low_complexity Low_complexity 1 21 0 321 221 8 16 chr5 27838332 27838454 -175247078 + (TA)n Simple_repeat Simple_repeat 1 121 0 21 36 0 0 chr5 27838830 27838858 -175246674 + AT_rich Low_complexity Low_complexity 1 28 0 260 326 87 32 chr5 27839128 27839346 -175246186 - MLT1J1 LTR MaLR 0 446 217 * 294 253 99 0 chr5 27839345 27839436 -175246096 - MLT1J2 LTR MaLR -288 162 63 31 0 0 0 chr5 27840695 27840726 -175244806 + AT_rich Low_complexity Low_complexity 1 31 0 2313 145 46 8 chr5 27840825 27841219 -175244313 - LTR57 LTR ERVL 0 411 3 2154 142 27 3 chr5 27841221 27841559 -175243973 - LTR57-int LTR ERVL 0 5343 4998 10748 151 29 4 chr5 27842211 27844459 -175241073 - LTR57-int LTR ERVL -353 4990 2626 10092 130 41 43 chr5 27844445 27844625 -175240907 - LTR57-int LTR ERVL -3512 1831 1652 * 378 0 0 0 chr5 27844625 27844667 -175240865 + (CA)n Simple_repeat Simple_repeat 1 42 0 10092 130 41 43 chr5 27844667 27845394 -175240138 - LTR57-int LTR ERVL -3691 1652 925 306 0 0 0 chr5 27845394 27845428 -175240104 + (CA)n Simple_repeat Simple_repeat 2 35 0 10092 130 41 43 chr5 27845428 27846352 -175239180 - LTR57-int LTR ERVL -4418 925 2 186 43 0 0 chr5 27846384 27846407 -175239125 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1929 168 41 27 chr5 27846407 27846602 -175238930 - LTR57 LTR ERVL -37 374 170 462 36 0 0 chr5 27846602 27846658 -175238874 + (TG)n Simple_repeat Simple_repeat 1 56 0 1929 168 41 27 chr5 27846658 27846831 -175238701 - LTR57 LTR ERVL -241 170 1 1863 162 0 0 chr5 27847785 27848087 -175237445 - AluSx SINE Alu 0 312 11 428 283 126 28 chr5 27848316 27848599 -175236933 + L1ME3A LINE L1 5465 5719 -451 2093 150 25 11 chr5 27848599 27848958 -175236574 - THE1B LTR MaLR 0 364 1 428 283 126 28 chr5 27848958 27849211 -175236321 + L1ME3A LINE L1 5719 6087 -83 213 355 159 16 chr5 27849837 27850026 -175235506 - MIR SINE MIR -11 251 36 233 204 20 0 chr5 27850029 27850078 -175235454 + CT-rich Low_complexity Low_complexity 3 52 0 28 29 0 0 chr5 27850488 27850523 -175235009 + AT_rich Low_complexity Low_complexity 1 35 0 922 237 59 37 chr5 27851591 27851912 -175233620 + L1MB4 LINE L1 2437 2764 -3382 2714 238 32 6 chr5 27851944 27852633 -175232899 + L1MB4 LINE L1 5472 6178 -2 484 298 10 47 chr5 27852729 27853016 -175232516 - MLT1H LTR MaLR -127 422 43 28 48 0 0 chr5 27853088 27853130 -175232402 + AT_rich Low_complexity Low_complexity 1 42 0 378 194 19 3 chr5 27853422 27853503 -175232029 + AluJ/FLAM SINE Alu 2 63 -239 763 224 19 0 chr5 27853509 27853670 -175231862 + FRAM SINE Alu 11 174 -2 1577 323 119 33 chr5 27854559 27855394 -175230138 + L2 LINE L2 2135 3077 -236 2241 109 0 3 chr5 27855394 27855696 -175229836 + AluSc SINE Alu 1 301 -8 1577 323 119 33 chr5 27855696 27855941 -175229591 + L2 LINE L2 3077 3299 -14 248 348 22 11 chr5 27855955 27856047 -175229485 - LTR50 LTR ERVL -277 518 426 245 234 63 81 chr5 27856221 27856332 -175229200 - LTR50 LTR ERVL -676 119 11 890 223 28 98 chr5 27856930 27857381 -175228151 - MLT1A1 LTR MaLR -2 394 1 223 252 178 56 chr5 27857787 27857894 -175227638 + MIR SINE MIR 113 232 -30 28 0 0 0 chr5 27858048 27858076 -175227456 + AT_rich Low_complexity Low_complexity 1 28 0 654 182 5 143 chr5 27858087 27858296 -175227236 - MER20 DNA MER1_type -37 182 3 272 313 39 55 chr5 27859616 27859798 -175225734 + MLT1I LTR MaLR 101 279 -130 3299 209 31 3 chr5 27860367 27861145 -175224387 - L1MA7 LINE L1 0 6291 5492 790 173 8 0 chr5 27861145 27861278 -175224254 + MSTB LTR MaLR 2 135 -291 829 167 87 66 chr5 27861303 27861454 -175224078 - L1MA7 LINE L1 -671 5497 5351 2273 91 3 3 chr5 27861454 27861762 -175223770 - AluY SINE Alu -3 308 1 829 167 87 66 chr5 27861762 27861970 -175223562 - L1MA7 LINE L1 -817 5351 5127 2849 6 0 3 chr5 27862020 27862332 -175223200 + AluY SINE Alu 1 311 0 1566 272 48 6 chr5 27863079 27863831 -175221701 - L1MEc LINE L1 -3361 2854 2116 2440 188 24 17 chr5 27863834 27864377 -175221155 - L1MA10 LINE L1 -7 6327 5781 1309 150 63 0 chr5 27864377 27864584 -175220948 + Tigger7 DNA MER2_type 2 221 -484 325 341 63 33 chr5 27864592 27865193 -175220339 - L1MEc LINE L1 -4308 2088 1470 445 231 114 78 chr5 27865215 27865530 -175220002 - LTR48 LTR ERV1 -16 771 245 836 190 178 30 chr5 27865540 27865809 -175219723 - LTR48 LTR ERV1 -478 309 1 329 264 84 7 chr5 27865810 27865965 -175219567 - L1MEc LINE L1 -4935 1461 1295 749 274 5 11 chr5 27865975 27866161 -175219371 - HERVL40 LTR ERVL -4719 811 627 1485 202 161 8 chr5 27866669 27867035 -175218497 - MSTA LTR MaLR -2 426 5 8147 169 19 48 chr5 27867045 27867861 -175217671 - MSTA-int LTR MaLR -9 1571 732 261 57 0 0 chr5 27867861 27867896 -175217636 + (TG)n Simple_repeat Simple_repeat 2 36 0 2078 104 4 7 chr5 27867896 27868176 -175217356 - AluSc SINE Alu -28 281 3 8147 169 19 48 chr5 27868176 27868975 -175216557 - MSTA-int LTR MaLR -846 734 3 1927 178 125 8 chr5 27868977 27869360 -175216172 - MSTA LTR MaLR 0 428 1 574 202 31 16 chr5 27869450 27869579 -175215953 - LTR40b LTR ERVL 0 462 332 2540 157 7 7 chr5 27869590 27870016 -175215516 + MSTA LTR MaLR 1 426 -2 2288 197 62 6 chr5 27870087 27870569 -175214963 + LTR22 LTR ERVK 1 509 0 792 292 64 8 chr5 27870570 27870820 -175214712 - LTR40b LTR ERVL -198 264 1 2103 279 45 54 chr5 27870925 27871871 -175213661 - L1MEc LINE L1 -5415 981 44 201 322 11 11 chr5 27872362 27872452 -175213080 + MIR SINE MIR 117 206 -56 339 164 0 0 chr5 27872561 27872622 -175212910 + (TG)n Simple_repeat Simple_repeat 2 62 0 27 0 0 0 chr5 27872622 27872649 -175212883 + AT_rich Low_complexity Low_complexity 1 27 0 500 294 65 45 chr5 27872656 27872993 -175212539 - MLT1L LTR MaLR -92 523 180 1461 219 67 6 chr5 27873463 27873819 -175211713 - MLT1B LTR MaLR 0 390 13 270 0 0 0 chr5 27873994 27874024 -175211508 + (TG)n Simple_repeat Simple_repeat 1 30 0 195 100 0 0 chr5 27874045 27874075 -175211457 + (TA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr5 27874125 27874153 -175211379 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 27874715 27874743 -175210789 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 27876235 27876264 -175209268 + AT_rich Low_complexity Low_complexity 1 29 0 1047 108 0 0 chr5 27876904 27877052 -175208480 + L1PA11 LINE L1 6024 6171 -3 1231 214 8 0 chr5 27877196 27877430 -175208102 - AluJo SINE Alu -61 251 16 2172 102 7 13 chr5 27877490 27877795 -175207737 - AluY SINE Alu -8 303 1 307 315 24 0 chr5 27878000 27878127 -175207405 + LTR16C LTR ERVL 357 486 -5 2224 121 0 9 chr5 27878221 27878536 -175206996 + AluSx SINE Alu 1 312 0 253 390 7 0 chr5 27878901 27879037 -175206495 + HERV16 LTR ERVL 480 616 -4380 509 298 13 13 chr5 27879447 27879605 -175205927 + HERV16 LTR ERVL 1013 1170 -3826 231 36 0 0 chr5 27879621 27879649 -175205883 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 3502 145 2 19 chr5 27879719 27880285 -175205247 + MER41D LTR ERV1 1 556 -1 332 254 39 147 chr5 27880414 27880721 -175204811 + MER41D-int LTR ERV1 115 388 -7368 1289 139 0 0 chr5 27881078 27881272 -175204260 + HERV16 LTR ERVL 431 624 -4719 464 177 0 0 chr5 27881303 27881382 -175204150 + AluJ/FRAM SINE Alu 219 297 -15 2044 160 0 0 chr5 27881680 27881980 -175203552 - AluSx SINE Alu -10 302 3 363 118 10 88 chr5 27882006 27882108 -175203424 + L1 LINE L1 4316 4409 -1737 1017 148 15 64 chr5 27882114 27882316 -175203216 + Tigger2a DNA MER2_type 1 192 -242 1368 109 0 0 chr5 27882316 27882500 -175203032 - AluSg/x SINE Alu 0 312 129 1888 73 12 0 chr5 27882515 27882774 -175202758 - L1PA5 LINE L1 0 6154 5893 314 194 0 14 chr5 27882775 27882847 -175202685 + HERV16 LTR ERVL 662 732 -4611 639 217 14 0 chr5 27882852 27882990 -175202542 + MER41D-int LTR ERV1 1508 1647 -6473 1423 102 0 158 chr5 27883407 27883477 -175202055 + MER41D-int LTR ERV1 1729 1808 -6312 4059 155 4 1 chr5 27883477 27884160 -175201372 + L1PA15 LINE L1 5481 6165 0 1423 102 0 158 chr5 27884160 27884463 -175201069 + MER41D-int LTR ERV1 1808 2043 -6077 644 183 11 63 chr5 27884470 27884645 -175200887 + MER49-int LTR ERV1 3564 3729 -2869 705 180 86 36 chr5 27884678 27884900 -175200632 + MER49-int LTR ERV1 3731 3963 -2635 369 247 59 32 chr5 27884894 27885083 -175200449 + MER49-int LTR ERV1 2607 4177 -2136 * 727 168 10 117 chr5 27885273 27885470 -175200062 + MER49-int LTR ERV1 3787 3962 -4158 561 150 196 0 chr5 27885650 27885780 -175199752 + MER49-int LTR ERV1 3950 6134 -624 1181 182 24 99 chr5 27885780 27886169 -175199363 + MER49-int LTR ERV1 6379 7097 0 1150 178 24 55 chr5 27886171 27886463 -175199069 + MER49 LTR ERV1 8 290 -633 607 141 20 0 chr5 27886447 27886546 -175198986 + MER49 LTR ERV1 615 715 -208 * 1275 157 18 27 chr5 27886558 27886781 -175198751 + MER41D-int LTR ERV1 4608 4828 -1848 2151 239 11 2 chr5 27887269 27887745 -175197787 + MER41D-int LTR ERV1 6118 6597 -79 363 304 0 0 chr5 27887814 27887916 -175197616 + MER41D-int LTR ERV1 5841 5942 -4 345 88 0 128 chr5 27887916 27888018 -175197514 + MER41D LTR ERV1 1 89 -468 1775 175 27 64 chr5 27888109 27888515 -175197017 + MER41D LTR ERV1 156 546 -11 292 310 9 43 chr5 27888964 27889080 -175196452 + MERVL LTR ERVL 3318 3429 -2056 26 0 0 0 chr5 27889343 27889369 -175196163 + AT_rich Low_complexity Low_complexity 1 26 0 1830 249 19 36 chr5 27889882 27890457 -175195075 - L1MD3 LINE L1 -1 7994 7430 352 162 0 44 chr5 27890472 27890540 -175194992 - MLT1F1 LTR MaLR -452 115 51 564 223 48 37 chr5 27890549 27890737 -175194795 - L1MC3 LINE L1 -681 7087 6898 1258 257 132 16 chr5 27891062 27891756 -175193776 - L1MC3 LINE L1 -743 5386 4950 231 177 16 16 chr5 27892027 27892089 -175193443 + A-rich Low_complexity Low_complexity 4 65 0 25 0 0 0 chr5 27892094 27892119 -175193413 + AT_rich Low_complexity Low_complexity 1 25 0 4361 128 28 1 chr5 27892121 27892833 -175192699 - L1MA3 LINE L1 -8 6297 5567 259 253 67 0 chr5 27892851 27892926 -175192606 - L1MC3 LINE L1 -4879 1240 1161 410 153 15 38 chr5 27893058 27893189 -175192343 + (TA)n Simple_repeat Simple_repeat 1 128 0 254 215 0 15 chr5 27893227 27893292 -175192240 + (TA)n Simple_repeat Simple_repeat 1 64 0 239 154 46 15 chr5 27894763 27894903 -175190629 + (TA)n Simple_repeat Simple_repeat 1 144 0 369 288 23 0 chr5 27895090 27895222 -175190310 + (CATA)n Simple_repeat Simple_repeat 1 135 0 2098 178 21 0 chr5 27895807 27896189 -175189343 + MLT1B LTR MaLR 1 390 0 30 27 0 0 chr5 27896996 27897033 -175188499 + AT_rich Low_complexity Low_complexity 1 37 0 3696 213 50 22 chr5 27897744 27898495 -175187037 - L1MA7 LINE L1 -4 6989 6261 1996 117 0 38 chr5 27898495 27898811 -175186721 - AluSx SINE Alu -6 306 3 3696 213 50 22 chr5 27898811 27899521 -175186011 - L1MA7 LINE L1 -732 6261 5478 * 7062 219 97 13 chr5 27899517 27901135 -175184397 - L1MA7 LINE L1 -5085 1764 11 183 162 0 0 chr5 27902362 27902399 -175183133 + T-rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 27904000 27904023 -175181509 + AT_rich Low_complexity Low_complexity 1 23 0 23 86 0 0 chr5 27904128 27904186 -175181346 + AT_rich Low_complexity Low_complexity 1 58 0 29 70 0 0 chr5 27905785 27905842 -175179690 + AT_rich Low_complexity Low_complexity 1 57 0 32 0 0 0 chr5 27905957 27905989 -175179543 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr5 27906639 27906666 -175178866 + AT_rich Low_complexity Low_complexity 1 27 0 1911 122 30 3 chr5 27906805 27907109 -175178423 + AluSx SINE Alu 1 312 0 989 188 0 90 chr5 27907568 27907791 -175177741 - MLT1B LTR MaLR 0 390 188 253 143 0 0 chr5 27907797 27907839 -175177693 - MLT1B LTR MaLR -348 42 1 497 324 61 44 chr5 27907932 27908275 -175177257 + MLT1J LTR MaLR 18 366 -145 1780 175 43 6 chr5 27908329 27908654 -175176878 + MER2 DNA MER2_type 3 339 -6 246 284 14 0 chr5 27908661 27908735 -175176797 + MLT1J LTR MaLR 437 511 0 981 169 13 0 chr5 27908870 27909024 -175176508 - MER70A LTR ERVL -313 159 4 356 272 89 16 chr5 27909027 27909218 -175176314 - L1M4 LINE L1 -1585 4561 4357 2146 198 74 2 chr5 27910130 27910574 -175174958 + MER31A LTR ERV1 1 476 -9 405 318 123 45 chr5 27910627 27911008 -175174524 - HAL1b LINE L1 -500 848 438 22 56 0 0 chr5 27911245 27911281 -175174251 + AT_rich Low_complexity Low_complexity 1 36 0 1305 157 30 30 chr5 27911321 27911583 -175173949 + THE1A LTR MaLR 1 262 -93 9765 106 4 0 chr5 27911583 27912937 -175172595 + THE1B-int LTR MaLR 222 1580 0 1876 141 36 28 chr5 27912937 27913298 -175172234 + THE1B LTR MaLR 1 364 0 466 341 68 38 chr5 27913688 27914057 -175171475 - HAL1 LINE L1 -1348 1159 780 624 213 24 0 chr5 27914748 27914875 -175170657 + MLT1D LTR MaLR 369 498 -7 180 97 0 0 chr5 27915392 27915423 -175170109 + (CA)n Simple_repeat Simple_repeat 2 32 0 1571 274 133 55 chr5 27916922 27917099 -175168433 - L1MD1 LINE L1 -28 6214 6052 1790 150 150 5 chr5 27917099 27917473 -175168059 - MSTA LTR MaLR 0 428 1 1571 274 133 55 chr5 27917473 27917619 -175167913 - L1MD1 LINE L1 -190 6052 5919 2215 78 0 7 chr5 27917619 27917933 -175167599 + AluY SINE Alu 1 312 0 1571 274 133 55 chr5 27917933 27919611 -175165921 - L1MD1 LINE L1 -323 5919 3877 2199 115 0 0 chr5 27919611 27919916 -175165616 - AluSg SINE Alu -5 305 1 1571 274 133 55 chr5 27919916 27920267 -175165265 - L1MD1 LINE L1 -2365 3877 3555 368 248 29 29 chr5 27920267 27920395 -175165137 + MER45A DNA AcHobo 30 156 -22 23 0 0 0 chr5 27920729 27920752 -175164780 + AT_rich Low_complexity Low_complexity 1 23 0 183 302 129 17 chr5 27921892 27922008 -175163524 - MIR SINE MIR 0 262 134 22 56 0 0 chr5 27922026 27922062 -175163470 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr5 27922444 27922470 -175163062 + AT_rich Low_complexity Low_complexity 1 26 0 1788 176 0 13 chr5 27923574 27923880 -175161652 + AluSx SINE Alu 1 302 -10 26 0 0 0 chr5 27923939 27923965 -175161567 + AT_rich Low_complexity Low_complexity 1 26 0 3684 234 78 18 chr5 27924345 27925888 -175159644 + L1MA10 LINE L1 4433 6111 -223 1286 213 49 24 chr5 27925888 27926216 -175159316 - MER1B DNA MER1_type -1 336 1 3684 234 78 18 chr5 27926216 27926421 -175159111 + L1MA10 LINE L1 6111 6302 -32 39 60 0 0 chr5 27929635 27929702 -175155830 + AT_rich Low_complexity Low_complexity 1 67 0 22 35 0 0 chr5 27929796 27929825 -175155707 + AT_rich Low_complexity Low_complexity 1 29 0 2011 134 0 10 chr5 27931281 27931580 -175153952 + AluSq SINE Alu 1 296 -17 307 366 17 47 chr5 27931648 27931734 -175153798 + MER5B DNA MER1_type 9 89 -89 180 0 0 0 chr5 27931734 27931754 -175153778 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 307 366 17 47 chr5 27931754 27931839 -175153693 + MER5B DNA MER1_type 89 175 -3 3727 289 69 27 chr5 27931849 27933464 -175152068 + L1MB8 LINE L1 11 1697 -5158 609 290 48 55 chr5 27933472 27933906 -175151626 + L1MB8 LINE L1 1979 2409 -4550 6172 271 55 20 chr5 27934134 27936946 -175148586 + L1MB8 LINE L1 2622 5483 -1474 1403 198 26 51 chr5 27936952 27937419 -175148113 + L1MB8 LINE L1 5752 6209 -767 311 145 35 208 chr5 27937714 27937868 -175147664 + LTR45 LTR ERV1 350 518 -7 1642 219 22 124 chr5 27937882 27938273 -175147259 + L1MB8 LINE L1 6187 6616 -373 646 140 9 19 chr5 27938273 27938380 -175147152 + U6 snRNA snRNA 2 107 0 946 106 88 0 chr5 27938380 27938540 -175146992 + L1MA2 LINE L1 6122 6295 -9 1642 219 22 124 chr5 27938540 27939042 -175146490 + L1MB8 LINE L1 6614 6989 0 222 214 0 0 chr5 27939478 27939534 -175145998 + (TA)n Simple_repeat Simple_repeat 2 57 0 29 104 0 0 chr5 27942009 27942115 -175143417 + AT_rich Low_complexity Low_complexity 1 106 0 285 186 106 53 chr5 27942419 27942532 -175143000 - MIR SINE MIR -108 154 36 375 210 85 45 chr5 27943019 27943195 -175142337 - L1MC5 LINE L1 -306 7655 7473 512 309 78 64 chr5 27943960 27944461 -175141071 + L1MEd LINE L1 747 1254 -4865 291 113 0 0 chr5 27944476 27944529 -175141003 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 253 241 0 0 chr5 27944577 27944631 -175140901 - MLT1H LTR MaLR -1 466 413 766 309 125 22 chr5 27944822 27945230 -175140302 - LTR16A LTR ERVL 0 450 1 331 305 48 62 chr5 27945431 27945802 -175139730 + L1MC/D LINE L1 5296 5661 -2147 227 271 129 29 chr5 27945834 27945974 -175139558 + L1MC/D LINE L1 5728 5881 -1927 22 56 0 0 chr5 27946198 27946234 -175139298 + AT_rich Low_complexity Low_complexity 1 36 0 1345 261 105 48 chr5 27946319 27946467 -175139065 + MLT1E LTR MaLR 42 180 -413 2093 139 0 0 chr5 27946467 27946770 -175138762 - AluSx SINE Alu -9 303 1 1345 261 105 48 chr5 27946770 27947143 -175138389 + MLT1E LTR MaLR 180 593 0 21 36 0 0 chr5 27947226 27947254 -175138278 + AT_rich Low_complexity Low_complexity 1 28 0 527 294 44 6 chr5 27947405 27947565 -175137967 + MER5A DNA MER1_type 2 167 -22 293 318 11 0 chr5 27947635 27947723 -175137809 - MLT1H LTR MaLR -163 392 304 340 240 8 132 chr5 27947852 27947973 -175137559 - MLT1H LTR MaLR -377 172 35 307 341 84 0 chr5 27948025 27948192 -175137340 - MLT1I LTR MaLR -224 185 5 22 70 0 0 chr5 27948815 27948858 -175136674 + AT_rich Low_complexity Low_complexity 1 43 0 2089 113 3 0 chr5 27949455 27949747 -175135785 - AluSg SINE Alu -16 294 2 238 314 12 24 chr5 27949888 27950057 -175135475 + (TA)n Simple_repeat Simple_repeat 2 168 0 2037 144 36 28 chr5 27950174 27950534 -175134998 + THE1B LTR MaLR 2 364 0 29 0 0 0 chr5 27950804 27950833 -175134699 + AT_rich Low_complexity Low_complexity 1 29 0 368 318 0 0 chr5 27951585 27951702 -175133830 - MLT2E LTR ERVL -4 624 532 336 274 47 22 chr5 27951804 27951950 -175133582 - MLT2F LTR ERVL -469 159 10 22 0 0 0 chr5 27952969 27952991 -175132541 + AT_rich Low_complexity Low_complexity 1 22 0 315 385 17 0 chr5 27953202 27953319 -175132213 - LTR16A LTR ERVL -114 336 218 423 348 39 29 chr5 27953334 27953541 -175131991 - LTR16A LTR ERVL -114 336 128 1239 251 14 38 chr5 27953657 27954028 -175131504 + MLT1A2 LTR MaLR 12 373 -1 1134 264 19 42 chr5 27954622 27955049 -175130483 + MER63C DNA MER1_type 2 418 -512 1143 204 7 3 chr5 27955049 27955312 -175130220 + MLT2D LTR ERVL 1 337 -60 294 95 0 0 chr5 27955330 27955372 -175130160 + (CA)n Simple_repeat Simple_repeat 1 42 0 1023 178 171 41 chr5 27955401 27955670 -175129862 + MER7A DNA MER2_type 44 345 -1 387 0 0 0 chr5 27955671 27955714 -175129818 + (TG)n Simple_repeat Simple_repeat 2 44 0 754 264 74 0 chr5 27955744 27955960 -175129572 + MER63C DNA MER1_type 418 649 -281 857 246 21 32 chr5 27955973 27956257 -175129275 - MER63C DNA MER1_type -568 362 82 907 246 42 0 chr5 27956263 27956523 -175129009 + MER63C DNA MER1_type 651 921 -9 211 281 0 0 chr5 27956650 27956707 -175128825 + GA-rich Low_complexity Low_complexity 4 60 0 22 35 0 0 chr5 27957245 27957274 -175128258 + AT_rich Low_complexity Low_complexity 1 29 0 214 130 19 19 chr5 27957995 27958049 -175127483 + (TA)n Simple_repeat Simple_repeat 2 55 0 23 0 0 0 chr5 27958711 27958734 -175126798 + AT_rich Low_complexity Low_complexity 1 23 0 309 281 36 66 chr5 27959078 27959274 -175126258 - HAL1 LINE L1 -33 2474 2285 26 64 0 0 chr5 27959291 27959338 -175126194 + AT_rich Low_complexity Low_complexity 1 47 0 2205 134 33 19 chr5 27960336 27960695 -175124837 - THE1B LTR MaLR 0 364 1 323 296 92 34 chr5 27961032 27961238 -175124294 - HAL1 LINE L1 -1487 1020 803 22 0 0 0 chr5 27961715 27961737 -175123795 + AT_rich Low_complexity Low_complexity 1 22 0 490 233 62 40 chr5 27962582 27962758 -175122774 + MER63A DNA MER1_type 3 182 -28 545 100 18 18 chr5 27963456 27963566 -175121966 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 1425 156 22 43 chr5 27964078 27964354 -175121178 + THE1C LTR MaLR 1 270 -105 1758 161 67 28 chr5 27966375 27966736 -175118796 + THE1C LTR MaLR 1 375 0 262 260 80 30 chr5 27968920 27969020 -175116512 - L2 LINE L2 0 3313 3209 1960 182 91 94 chr5 27969179 27969237 -175116295 - MLT2B3 LTR ERVL 0 554 497 473 58 14 0 chr5 27969237 27969306 -175116226 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 1960 182 91 94 chr5 27969306 27969797 -175115735 - MLT2B3 LTR ERVL -57 497 7 1257 209 73 42 chr5 27969798 27969831 -175115701 - MER58B DNA MER1_type -2080 340 309 1577 238 8 8 chr5 27969831 27970196 -175115336 - MLT1A1 LTR MaLR 0 365 1 1257 209 73 42 chr5 27970196 27970492 -175115040 - MER58B DNA MER1_type -2111 309 1 255 297 25 59 chr5 27970660 27970778 -175114754 - L2 LINE L2 0 3313 3200 2011 89 0 73 chr5 27971098 27971414 -175114118 - AluSx SINE Alu -3 309 17 1265 261 32 37 chr5 27971695 27972101 -175113431 + MER67D-int LTR ERV1 398 801 -4135 610 274 74 23 chr5 27972120 27972335 -175113197 + MER67D-int LTR ERV1 4600 4825 -111 920 181 31 84 chr5 27972430 27972656 -175112876 + MER67D LTR ERV1 1 214 -300 229 285 72 25 chr5 27973504 27973781 -175111751 + L1ME1 LINE L1 1230 1522 -4901 383 326 57 65 chr5 27973876 27974159 -175111373 + L1ME1 LINE L1 1829 2110 -5012 1930 121 10 10 chr5 27974159 27974464 -175111068 + AluY SINE Alu 1 305 -6 383 326 57 65 chr5 27974464 27974551 -175110981 + L1ME1 LINE L1 2110 2196 -4926 245 250 73 10 chr5 27974558 27974654 -175110878 + L1ME1 LINE L1 2057 2158 -4785 282 222 265 8 chr5 27974702 27974819 -175110713 + LTR50 LTR ERVL 21 167 -628 251 258 46 62 chr5 27975393 27975553 -175109979 + L1ME1 LINE L1 2159 2468 -4631 1222 106 0 0 chr5 27976183 27976353 -175109179 - AluY SINE Alu -7 304 135 22 35 0 0 chr5 27976429 27976458 -175109074 + AT_rich Low_complexity Low_complexity 1 29 0 332 271 50 55 chr5 27976467 27976666 -175108866 - L1M4 LINE L1 -2278 3868 3671 26 50 0 0 chr5 27976775 27976815 -175108717 + AT_rich Low_complexity Low_complexity 1 40 0 219 36 0 0 chr5 27977027 27977055 -175108477 + (TG)n Simple_repeat Simple_repeat 2 29 0 219 69 0 0 chr5 27977054 27977083 -175108449 + (TA)n Simple_repeat Simple_repeat 1 29 0 2038 251 42 20 chr5 27977395 27977985 -175107547 + LTR26 LTR ERV1 1 603 0 23 33 0 0 chr5 27979225 27979255 -175106277 + AT_rich Low_complexity Low_complexity 1 30 0 269 330 110 0 chr5 27980485 27980603 -175104929 - MLT1J1 LTR MaLR -315 131 1 360 296 89 19 chr5 27980603 27980860 -175104672 + L1ME1 LINE L1 3804 4078 -2863 23 0 0 0 chr5 27981074 27981097 -175104435 + AT_rich Low_complexity Low_complexity 1 23 0 270 325 16 0 chr5 27981949 27982072 -175103460 - LTR33 LTR ERVL -70 451 327 1328 230 25 22 chr5 27982478 27982835 -175102697 + L1ME1 LINE L1 5560 5917 -1024 * 4343 152 25 11 chr5 27982826 27983610 -175101922 + L1MA8 LINE L1 5429 6223 -68 230 195 0 0 chr5 27983629 27983670 -175101862 + Tigger5 DNA MER2_type 21 61 -2262 * 1152 134 27 0 chr5 27983669 27983856 -175101676 + Tigger5 DNA MER2_type 2062 2253 -70 1352 177 53 42 chr5 27983871 27984154 -175101378 - AluSx SINE Alu -26 286 1 24 32 0 0 chr5 27984175 27984206 -175101326 + AT_rich Low_complexity Low_complexity 1 31 0 860 212 16 36 chr5 27984364 27984730 -175100802 + L1ME1 LINE L1 5930 6293 -668 34539 85 62 2 chr5 27984745 27990524 -175095008 + L1PA6 LINE L1 11 6148 -6 1026 266 56 0 chr5 27990523 27990827 -175094705 + L1ME1 LINE L1 6300 6620 -341 * 1073 99 0 41 chr5 27990830 27991001 -175094531 + AluY SINE Alu 139 302 -9 471 293 108 5 chr5 27991020 27991232 -175094300 + L1ME1 LINE L1 6636 6869 -92 438 333 27 5 chr5 27991242 27991428 -175094104 + MLT1J LTR MaLR 6 195 -316 259 312 189 33 chr5 27991858 27992191 -175093341 + L2 LINE L2 2921 3305 -8 183 290 58 14 chr5 27992314 27992383 -175093149 - L2 LINE L2 -90 3223 3152 849 321 118 51 chr5 27992600 27993370 -175092162 - L2 LINE L2 -402 2912 2091 580 373 24 4 chr5 27994278 27994533 -175090999 + L2 LINE L2 569 828 -2486 376 201 63 8 chr5 27995010 27995150 -175090382 + L1MB8 LINE L1 6018 6176 -2 225 315 0 0 chr5 27995150 27995280 -175090252 + (TATATG)n Simple_repeat Simple_repeat 5 134 0 2145 73 0 4 chr5 27995532 27995805 -175089727 - AluY SINE Alu -39 272 1 275 284 62 0 chr5 27996236 27996317 -175089215 + MER69 DNA AcHobo 8 93 -2433 553 242 148 35 chr5 27996323 27996810 -175088722 + MER69 DNA AcHobo 1950 2491 -35 2357 118 3 0 chr5 27996861 27997210 -175088322 - L1PA14 LINE L1 0 6161 5812 21 0 0 0 chr5 27997711 27997732 -175087800 + AT_rich Low_complexity Low_complexity 1 21 0 1837 137 48 3 chr5 27997919 27998211 -175087321 - AluSx SINE Alu -7 305 1 21 57 0 0 chr5 27998564 27998599 -175086933 + AT_rich Low_complexity Low_complexity 1 35 0 234 192 0 0 chr5 27999241 27999293 -175086239 + GA-rich Low_complexity Low_complexity 2 53 0 3079 17 0 0 chr5 27999501 27999857 -175085675 + L1PA2 LINE L1 5798 6153 -2 25 99 0 0 chr5 28000764 28000845 -175084687 + AT_rich Low_complexity Low_complexity 1 81 0 24 0 0 0 chr5 28001659 28001683 -175083849 + AT_rich Low_complexity Low_complexity 1 24 0 1356 196 7 22 chr5 28001990 28002261 -175083271 - AluJb SINE Alu -45 267 1 285 232 61 0 chr5 28002291 28002373 -175083159 - L1MCa LINE L1 -4818 1608 1522 777 310 61 3 chr5 28002663 28002989 -175082543 - L2 LINE L2 -1130 2184 1840 2649 197 9 4 chr5 28002990 28003523 -175082009 + L1PA15 LINE L1 4470 5005 -1141 3732 163 12 40 chr5 28003628 28004427 -175081105 + L1PA15 LINE L1 5382 6158 -7 1358 205 7 34 chr5 28004680 28004978 -175080554 + AluJo SINE Alu 1 290 -22 26 0 0 0 chr5 28005428 28005454 -175080078 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr5 28005499 28005519 -175080013 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 5512 82 48 0 chr5 28005519 28006297 -175079235 - L1PA8 LINE L1 -24 6148 5334 940 106 81 6 chr5 28006450 28006611 -175078921 - L1MA2 LINE L1 -10 6294 6122 647 140 9 19 chr5 28006611 28006718 -175078814 - U6 snRNA snRNA 0 107 2 26994 155 22 77 chr5 28006719 28008909 -175076623 - L1PA8A LINE L1 -396 5736 3429 2137 20 8 0 chr5 28008909 28009159 -175076373 + L1PA4 LINE L1 5901 6153 -2 26994 155 22 77 chr5 28009159 28010602 -175074930 - L1PA8A LINE L1 -2703 3429 1909 1862 140 20 3 chr5 28010602 28010894 -175074638 - AluSg SINE Alu -13 297 1 26994 155 22 77 chr5 28010894 28013321 -175072211 - L1PA8A LINE L1 -4223 1909 10 1029 266 9 4 chr5 28013670 28013903 -175071629 + Tigger5 DNA MER2_type 1 234 -2089 * 2459 163 20 60 chr5 28013887 28013958 -175071574 + Tigger5 DNA MER2_type 1835 1907 -416 2214 107 3 10 chr5 28013958 28014258 -175071274 - AluSx SINE Alu -14 298 1 2459 163 20 60 chr5 28014258 28014321 -175071211 + Tigger5 DNA MER2_type 1907 1971 -352 2177 155 28 0 chr5 28014321 28014675 -175070857 - THE1B LTR MaLR 0 364 1 2459 163 20 60 chr5 28014675 28015043 -175070489 + Tigger5 DNA MER2_type 1971 2318 -5 3818 209 7 62 chr5 28015248 28016280 -175069252 - L1P LINE L1 -2315 3831 2857 4602 162 60 10 chr5 28016307 28017452 -175068080 + L1PA15 LINE L1 4975 6165 0 22 35 0 0 chr5 28018506 28018535 -175066997 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 28018764 28018801 -175066731 + AT_rich Low_complexity Low_complexity 1 37 0 307 337 79 14 chr5 28019098 28019377 -175066155 - L1M4 LINE L1 -3702 2444 2148 270 0 0 0 chr5 28019782 28019812 -175065720 + (TG)n Simple_repeat Simple_repeat 2 31 0 1971 115 0 0 chr5 28019812 28020073 -175065459 - AluSx SINE Alu -50 262 2 242 290 0 19 chr5 28021101 28021208 -175064324 - HAL1 LINE L1 -111 2396 2292 675 47 0 85 chr5 28021429 28021558 -175063974 - AluY SINE Alu 0 306 187 888 311 104 56 chr5 28021991 28022862 -175062670 - HAL1 LINE L1 -714 1793 881 3477 181 16 34 chr5 28023990 28024687 -175060845 + L1M4c LINE L1 6 689 -5695 905 130 13 0 chr5 28024681 28024835 -175060697 + L1M4c LINE L1 1678 1833 -4551 * 259 132 88 0 chr5 28024837 28024894 -175060638 + AluY SINE Alu 1 46 -253 2084 199 33 28 chr5 28024904 28025477 -175060055 + pTR5 LTR ERV1 769 1344 -1094 4272 115 108 42 chr5 28025493 28026264 -175059268 + LTR12 LTR ERV1 5 826 0 2065 66 0 26 chr5 28026264 28026536 -175058996 + AluY SINE Alu 31 295 -16 443 320 44 34 chr5 28027352 28027558 -175057974 - MIR SINE MIR -44 218 11 1011 268 29 29 chr5 28028183 28028741 -175056791 - L1M4 LINE L1 -3668 2976 2469 707 199 52 36 chr5 28029177 28029389 -175056143 + MER61D LTR ERV1 340 790 -4 3366 264 42 53 chr5 28029406 28031023 -175054509 + MER61D-int LTR ERV1 39 1604 -6015 1335 181 13 0 chr5 28031056 28031293 -175054239 + MER61D-int LTR ERV1 2168 2407 -4684 4224 254 26 5 chr5 28031329 28032226 -175053306 + MER61D-int LTR ERV1 2505 3420 -3671 1011 221 108 0 chr5 28032606 28032837 -175052695 + MER52-int LTR ERV1 6537 6792 -299 2462 146 11 3 chr5 28033795 28034165 -175051367 + THE1C-int LTR MaLR 902 1274 -306 1044 65 18 24 chr5 28034147 28034316 -175051216 + THE1C-int LTR MaLR 1407 1574 -6 * 1278 123 5 30 chr5 28034320 28034523 -175051009 + THE1C LTR MaLR 1 198 -177 715 223 46 7 chr5 28034525 28034744 -175050788 + MER61D LTR ERV1 274 425 0 1263 277 80 48 chr5 28034942 28035385 -175050147 - L1M4 LINE L1 -4562 2084 1657 2582 124 0 11 chr5 28035385 28035764 -175049768 + THE1C LTR MaLR 1 375 0 1263 277 80 48 chr5 28035764 28036488 -175049044 - L1M4 LINE L1 -4989 1657 882 415 318 91 56 chr5 28036587 28036721 -175048811 - L1M4 LINE L1 -5660 882 754 213 39 0 0 chr5 28036721 28036747 -175048785 + (TTA)n Simple_repeat Simple_repeat 3 28 0 415 318 91 56 chr5 28036747 28037427 -175048105 - L1M4 LINE L1 -5788 754 40 353 272 149 34 chr5 28038567 28038802 -175046730 + LTR41 LTR ERVL 2 263 -510 490 321 28 9 chr5 28039876 28040091 -175045441 + ERVL LTR ERVL 471 689 -5075 512 340 84 61 chr5 28040311 28040897 -175044635 + ERVL LTR ERVL 1374 1972 -3792 2268 117 0 0 chr5 28040897 28041205 -175044327 + AluSg SINE Alu 3 310 0 2087 110 20 0 chr5 28041976 28042268 -175043264 + AluSp SINE Alu 1 298 -15 1654 132 60 87 chr5 28042564 28042944 -175042588 + THE1C LTR MaLR 1 370 -5 232 26 0 51 chr5 28043119 28043158 -175042374 + (TA)n Simple_repeat Simple_repeat 1 37 0 1762 140 29 42 chr5 28043234 28043612 -175041920 + THE1C LTR MaLR 3 375 0 775 210 6 6 chr5 28046020 28046177 -175039355 + Tigger1 DNA MER2_type 1 157 -2261 * 927 142 186 0 chr5 28046166 28046349 -175039183 + Tigger1 DNA MER2_type 2202 2418 0 1434 191 34 24 chr5 28046656 28046950 -175038582 + AluJo SINE Alu 1 297 -15 682 189 8 0 chr5 28047625 28047757 -175037775 - FLAM_C SINE Alu 0 133 1 440 213 44 52 chr5 28047804 28047940 -175037592 + L1MB5 LINE L1 6037 6171 -3 871 234 109 7 chr5 28048365 28048668 -175036864 - MER33 DNA MER1_type -1 323 1 356 291 57 32 chr5 28050298 28050456 -175035076 - MIR SINE MIR 0 262 101 994 284 68 65 chr5 28050899 28052051 -175033481 - L1M4 LINE L1 -2531 3615 2461 339 335 69 28 chr5 28052052 28052270 -175033262 + L1ME3A LINE L1 4984 5210 -936 1584 280 69 48 chr5 28052318 28053187 -175032345 + L1ME3A LINE L1 5283 6169 -1 1149 283 36 3 chr5 28053357 28053718 -175031814 + L1PB2 LINE L1 6 378 -6485 * 6176 239 10 14 chr5 28053708 28055497 -175030035 + L1PB2 LINE L1 2633 4414 -2448 5937 182 14 18 chr5 28055498 28057802 -175027730 + L1PB2 LINE L1 4574 6867 0 809 228 115 59 chr5 28058337 28058710 -175026822 + MSTD LTR MaLR 1 394 -2 270 339 48 0 chr5 28058755 28058879 -175026653 + MIR3 SINE MIR 40 169 -39 1700 201 12 58 chr5 28059501 28059804 -175025728 + MLT2D LTR ERVL 1 280 -134 1993 125 0 10 chr5 28059804 28060101 -175025431 - AluSg SINE Alu -8 302 9 1700 201 12 58 chr5 28060101 28060229 -175025303 + MLT2D LTR ERVL 280 412 -2 260 284 0 0 chr5 28060876 28060943 -175024589 + CT-rich Low_complexity Low_complexity 2 68 0 21 36 0 0 chr5 28060949 28060977 -175024555 + AT_rich Low_complexity Low_complexity 1 28 0 783 196 0 8 chr5 28060986 28061119 -175024413 - FAM SINE Alu -34 151 20 25 31 0 0 chr5 28061190 28061222 -175024310 + AT_rich Low_complexity Low_complexity 1 32 0 228 286 13 0 chr5 28061295 28061372 -175024160 - L1ME LINE L1 -578 5588 5511 2193 120 0 22 chr5 28061425 28061742 -175023790 - AluSg SINE Alu 0 310 1 2120 94 14 0 chr5 28061861 28062148 -175023384 - AluSc SINE Alu -18 291 1 26 0 0 0 chr5 28062236 28062262 -175023270 + AT_rich Low_complexity Low_complexity 1 26 0 506 311 120 78 chr5 28062279 28063034 -175022498 - L2 LINE L2 -73 3240 2518 695 209 0 0 chr5 28063034 28063163 -175022369 + FLAM_A SINE Alu 1 129 -4 506 311 120 78 chr5 28063163 28063179 -175022353 - L2 LINE L2 -795 2518 2504 1020 79 0 48 chr5 28063179 28063368 -175022164 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 506 311 120 78 chr5 28063368 28063550 -175021982 - L2 LINE L2 -809 2504 1128 5181 89 27 7 chr5 28063912 28064663 -175020869 - MER4E LTR ERV1 0 766 1 7557 143 44 16 chr5 28065512 28067499 -175018033 - MER4E-int LTR ERV1 -113 6645 4452 3507 134 36 67 chr5 28067498 28068169 -175017363 - MER4E-int LTR ERV1 -2670 4088 3439 * 5252 141 54 31 chr5 28068169 28069279 -175016253 - MER4E-int LTR ERV1 -3663 3095 1961 3826 137 37 3 chr5 28069282 28069881 -175015651 - LTR9B LTR ERV1 0 644 26 1358 118 68 18 chr5 28069892 28070079 -175015453 - MER4E-int LTR ERV1 -4794 1964 1757 1747 65 12 29 chr5 28070079 28070325 -175015207 + AluY SINE Alu 63 304 -7 1358 118 68 18 chr5 28070325 28070417 -175015115 - MER4E-int LTR ERV1 -5001 1757 1671 376 222 4 38 chr5 28070844 28070993 -175014539 + pTR5 LTR ERV1 37 685 -95 2814 150 107 29 chr5 28071022 28071683 -175013849 - MER4E-int LTR ERV1 -3363 1652 940 1498 122 262 9 chr5 28071694 28072030 -175013502 - MER4E-int LTR ERV1 -5586 1172 752 1926 132 7 7 chr5 28072030 28072326 -175013206 - MER4E-int LTR ERV1 -6462 296 1 4920 99 27 4 chr5 28072330 28073075 -175012457 - MER4E LTR ERV1 -4 762 1 1936 160 0 0 chr5 28073299 28073587 -175011945 - AluSx SINE Alu -22 290 3 203 162 0 0 chr5 28073633 28073670 -175011862 + T-rich Low_complexity Low_complexity 4 40 0 2034 112 0 0 chr5 28074264 28074542 -175010990 + AluSq SINE Alu 36 313 0 185 409 131 10 chr5 28074560 28074873 -175010659 - L2 LINE L2 -380 2934 2584 1609 178 169 16 chr5 28075330 28075699 -175009833 + MSTA LTR MaLR 4 428 0 8954 156 9 37 chr5 28075701 28077325 -175008207 + MSTA-int LTR MaLR 3 1580 0 1331 201 177 14 chr5 28077325 28077693 -175007839 + MSTA LTR MaLR 1 428 0 396 280 70 13 chr5 28077693 28077850 -175007682 + MIR SINE MIR 95 260 -2 24 53 0 0 chr5 28078262 28078300 -175007232 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 28079684 28079705 -175005827 + AT_rich Low_complexity Low_complexity 1 21 0 1464 185 10 27 chr5 28079742 28080040 -175005492 + AluJb SINE Alu 1 293 -19 26 74 0 0 chr5 28080320 28080374 -175005158 + AT_rich Low_complexity Low_complexity 1 54 0 2380 80 0 0 chr5 28080490 28080791 -175004741 - AluSq SINE Alu -11 302 2 326 198 31 52 chr5 28081356 28081452 -175004080 - MER105 DNA DNA -5 199 106 2014 132 0 4 chr5 28083338 28083618 -175001914 + AluSx SINE Alu 1 279 -33 217 260 60 40 chr5 28083796 28083896 -175001636 + MIR SINE MIR 74 175 -87 22 0 0 0 chr5 28083969 28083991 -175001541 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 28084272 28084301 -175001231 + AT_rich Low_complexity Low_complexity 1 29 0 182 305 17 17 chr5 28085317 28085376 -175000156 - MER5A DNA MER1_type -1 188 130 30 27 0 0 chr5 28085526 28085563 -174999969 + AT_rich Low_complexity Low_complexity 1 37 0 1728 224 15 27 chr5 28085595 28086001 -174999531 + MSTB2 LTR MaLR 4 404 -53 1478 241 88 8 chr5 28087190 28087658 -174997874 + MLT1D LTR MaLR 1 505 0 502 333 128 10 chr5 28088319 28088616 -174996916 - LTR16B LTR ERVL -125 339 8 182 88 0 29 chr5 28088755 28088789 -174996743 + (TA)n Simple_repeat Simple_repeat 2 34 0 370 289 36 6 chr5 28088878 28089044 -174996488 + L1MEc LINE L1 175 345 -6218 870 231 11 16 chr5 28089081 28089267 -174996265 + L1MEc LINE L1 442 626 -5758 416 121 30 0 chr5 28089276 28089342 -174996190 + MADE1 DNA Mariner 13 80 0 4684 261 66 34 chr5 28089347 28089706 -174995826 + L1MB3 LINE L1 2118 2464 -3955 331 113 0 16 chr5 28089706 28089768 -174995764 + L1PA11 LINE L1 6113 6173 -1 4684 261 66 34 chr5 28089768 28093573 -174991959 + L1MB3 LINE L1 2464 6417 -2 24 32 0 0 chr5 28093589 28093620 -174991912 + AT_rich Low_complexity Low_complexity 1 31 0 4186 167 15 1 chr5 28093626 28094364 -174991168 + L1PA16 LINE L1 5415 6162 -4 235 286 19 9 chr5 28094366 28094471 -174991061 + L1MEc LINE L1 1185 1290 -5273 22 0 0 0 chr5 28094521 28094543 -174990989 + AT_rich Low_complexity Low_complexity 1 22 0 261 316 40 67 chr5 28094543 28094768 -174990764 + L1MDa LINE L1 119 337 -6307 854 230 108 26 chr5 28095282 28095762 -174989770 + L1MDa LINE L1 1255 1785 -4859 1676 275 90 26 chr5 28095776 28096978 -174988554 + L1MDa LINE L1 1839 3129 -3515 215 211 18 18 chr5 28097048 28097105 -174988427 + (TA)n Simple_repeat Simple_repeat 1 57 0 287 289 26 0 chr5 28097127 28097203 -174988329 + L1MDa LINE L1 3174 3251 -3393 490 303 97 70 chr5 28097214 28097352 -174988180 + L1MDa LINE L1 8 141 -6401 381 56 19 0 chr5 28097352 28097406 -174988126 + L1PA7 LINE L1 6097 6151 -3 490 303 97 70 chr5 28097406 28097951 -174987581 + L1MDa LINE L1 141 709 -5833 21 0 0 0 chr5 28097970 28097991 -174987541 + AT_rich Low_complexity Low_complexity 1 21 0 1598 231 69 9 chr5 28100150 28100570 -174984962 - MLT1C LTR MaLR -6 461 17 21 0 0 0 chr5 28100699 28100720 -174984812 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 28101162 28101182 -174984350 + (TAA)n Simple_repeat Simple_repeat 2 21 0 207 111 0 28 chr5 28101918 28101954 -174983578 + (GA)n Simple_repeat Simple_repeat 2 36 0 905 112 0 0 chr5 28102083 28102208 -174983324 + THE1B LTR MaLR 236 360 -4 808 213 0 0 chr5 28102547 28102697 -174982835 + FRAM SINE Alu 1 150 -16 26 50 0 0 chr5 28102697 28102737 -174982795 + AT_rich Low_complexity Low_complexity 1 40 0 238 183 32 32 chr5 28102799 28102892 -174982640 + (TA)n Simple_repeat Simple_repeat 1 93 0 2352 74 7 3 chr5 28103024 28103333 -174982199 - AluY SINE Alu -1 310 1 511 77 26 0 chr5 28103445 28103523 -174982009 - MADE1 DNA Mariner 0 80 1 1387 250 66 50 chr5 28104992 28105389 -174980143 + L1MDa LINE L1 2697 3111 -3533 389 36 18 0 chr5 28105389 28105444 -174980088 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 1387 250 66 50 chr5 28105444 28105741 -174979791 + L1MDa LINE L1 3111 3402 -3242 373 256 144 26 chr5 28105902 28106097 -174979435 + L1MDa LINE L1 3971 4188 -2456 2521 281 77 42 chr5 28106187 28107053 -174978479 + L1M4 LINE L1 3477 4312 -1834 1900 165 19 32 chr5 28107053 28107422 -174978110 - THE1B LTR MaLR 0 364 1 10320 121 17 3 chr5 28107422 28108980 -174976552 - THE1B-int LTR MaLR 0 1580 1 1931 167 11 35 chr5 28108980 28109351 -174976181 - THE1B LTR MaLR 0 364 3 2521 281 77 42 chr5 28109351 28110075 -174975457 + L1M4 LINE L1 4312 5133 -1013 1327 184 35 42 chr5 28110075 28110363 -174975169 + AluJb SINE Alu 5 290 -22 2521 281 77 42 chr5 28110363 28110468 -174975064 + L1M4 LINE L1 5133 5233 -913 468 226 54 73 chr5 28110475 28110679 -174974853 + L1ME2 LINE L1 5955 6154 -10 222 171 0 0 chr5 28111216 28111257 -174974275 + CT-rich Low_complexity Low_complexity 4 44 0 339 352 34 22 chr5 28111345 28111524 -174974008 + L2 LINE L2 2635 2815 -499 3266 188 35 23 chr5 28111611 28112363 -174973169 - L1MA10 LINE L1 -9 6325 5565 190 308 0 0 chr5 28113419 28113471 -174972061 + MIR SINE MIR 90 141 -121 28 0 0 0 chr5 28114090 28114118 -174971414 + AT_rich Low_complexity Low_complexity 1 28 0 338 273 55 42 chr5 28114628 28114793 -174970739 + MLT1D LTR MaLR 18 184 -321 574 311 151 33 chr5 28115348 28115584 -174969948 + MLT1G LTR MaLR 1 208 -382 219 36 0 0 chr5 28115584 28115612 -174969920 + (TC)n Simple_repeat Simple_repeat 1 28 0 574 311 151 33 chr5 28115612 28115929 -174969603 + MLT1G LTR MaLR 208 590 0 23 0 0 0 chr5 28116485 28116508 -174969024 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr5 28117875 28117905 -174967627 + (TC)n Simple_repeat Simple_repeat 2 31 0 24 32 0 0 chr5 28118228 28118259 -174967273 + AT_rich Low_complexity Low_complexity 1 31 0 2032 123 3 0 chr5 28118873 28119195 -174966337 - AluSp SINE Alu 0 323 1 765 192 160 54 chr5 28119391 28119990 -174965542 - MER4C LTR ERV1 -8 668 1 439 252 37 133 chr5 28119990 28120208 -174965324 - MIR SINE MIR -37 225 29 296 333 21 28 chr5 28120266 28120407 -174965125 + L2 LINE L2 2707 2846 -468 186 354 89 0 chr5 28120683 28120762 -174964770 + L2 LINE L2 3180 3265 -48 21 36 0 0 chr5 28120762 28120790 -174964742 + AT_rich Low_complexity Low_complexity 1 28 0 1741 137 17 37 chr5 28122675 28123103 -174962429 + Charlie3 DNA MER1_type 6 2711 0 1568 241 70 42 chr5 28123121 28123622 -174961910 + MLT1E2 LTR MaLR 47 561 -65 24 53 0 0 chr5 28123732 28123770 -174961762 + AT_rich Low_complexity Low_complexity 1 38 0 193 45 23 68 chr5 28123776 28123820 -174961712 + (TTTTTA)n Simple_repeat Simple_repeat 6 47 0 215 69 17 52 chr5 28123825 28123883 -174961649 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 435 252 43 0 chr5 28123920 28124035 -174961497 - MER110A LTR ERV1 -348 120 1 22 0 0 0 chr5 28124158 28124180 -174961352 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr5 28124490 28124545 -174960987 + AT_rich Low_complexity Low_complexity 1 55 0 1999 127 10 16 chr5 28124648 28124962 -174960570 - AluSx SINE Alu 0 312 1 34 0 0 0 chr5 28124989 28125023 -174960509 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 28125244 28125265 -174960267 + AT_rich Low_complexity Low_complexity 1 21 0 11217 101 3 34 chr5 28125484 28127901 -174957631 + L1PA7 LINE L1 3752 6153 -1 27 0 0 0 chr5 28127902 28127929 -174957603 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr5 28129202 28129230 -174956302 + AT_rich Low_complexity Low_complexity 1 28 0 272 48 24 0 chr5 28130351 28130393 -174955139 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 683 24 0 0 chr5 28130404 28130488 -174955044 - L1PA3 LINE L1 -5 6150 6067 2824 204 22 22 chr5 28132017 28132609 -174952923 + L1MC1 LINE L1 20 611 -5815 1976 140 50 20 chr5 28132634 28132976 -174952556 + THE1B LTR MaLR 1 352 -12 628 192 8 0 chr5 28133080 28133205 -174952327 + L1MC1 LINE L1 887 1012 -5414 297 0 0 0 chr5 28133221 28133254 -174952278 + (CA)n Simple_repeat Simple_repeat 1 33 0 5144 262 58 54 chr5 28133255 28134851 -174950681 + L1MC1 LINE L1 2526 4170 -2256 249 111 0 0 chr5 28134851 28134887 -174950645 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 5144 262 58 54 chr5 28134887 28135619 -174949913 + L1MC1 LINE L1 4170 4898 -1528 272 217 0 72 chr5 28135629 28135712 -174949820 + L1MC1 LINE L1 5103 5179 -1247 2161 113 0 3 chr5 28135715 28136016 -174949516 - AluSg SINE Alu -8 302 3 921 107 7 7 chr5 28136020 28136160 -174949372 - AluSp/q SINE Alu -6 307 168 4855 189 32 24 chr5 28136272 28136807 -174948725 + L1MC1 LINE L1 5539 6068 -545 891 222 102 68 chr5 28136807 28137190 -174948342 - MSTD LTR MaLR 0 396 1 4855 189 32 24 chr5 28137190 28137713 -174947819 + L1MC1 LINE L1 6068 6606 -7 183 80 0 0 chr5 28137871 28137896 -174947636 + (CA)n Simple_repeat Simple_repeat 1 25 0 194 0 39 0 chr5 28138264 28138290 -174947242 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 776 301 82 43 chr5 28138840 28139278 -174946254 + MLT1H1 LTR MaLR 100 554 -1 209 33 33 0 chr5 28139510 28139540 -174945992 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 233 329 14 70 chr5 28140718 28140861 -174944671 + MIR3 SINE MIR 69 203 -5 22 80 0 0 chr5 28141217 28141267 -174944265 + AT_rich Low_complexity Low_complexity 1 50 0 379 0 0 0 chr5 28142180 28142222 -174943310 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1976 118 3 24 chr5 28142222 28142510 -174943022 - AluSx SINE Alu -31 281 1 251 256 24 24 chr5 28142551 28142633 -174942899 + (CATA)n Simple_repeat Simple_repeat 3 84 0 254 269 106 0 chr5 28143458 28143562 -174941970 - Zaphod DNA AcHobo 0 4031 3917 2304 100 0 3 chr5 28143599 28143898 -174941634 - AluSg SINE Alu 0 310 13 267 378 21 59 chr5 28143920 28144158 -174941374 - MER115 DNA AcHobo -136 557 329 234 67 0 0 chr5 28144317 28144347 -174941185 + 5S rRNA rRNA 52 81 -40 14739 127 50 10 chr5 28144347 28144744 -174940788 + LOR1a-int LTR ERV1 623 1003 -7117 2124 109 22 0 chr5 28144744 28145055 -174940477 + L1PA6 LINE L1 5831 6148 -6 14739 127 50 10 chr5 28145055 28148081 -174937451 + LOR1a-int LTR ERV1 1003 4222 -3898 5917 136 7 8 chr5 28148097 28149041 -174936491 + LOR1a-int LTR ERV1 5122 6064 -2056 572 152 0 11 chr5 28149040 28149132 -174936400 + LOR1a-int LTR ERV1 8030 8120 0 * 2824 164 37 6 chr5 28149132 28149614 -174935918 + LOR1a LTR ERV1 1 497 0 905 231 34 4 chr5 28149710 28149948 -174935584 + L1MC3 LINE L1 7480 7724 -61 236 62 92 46 chr5 28149948 28150013 -174935519 + (TTATA)n Simple_repeat Simple_repeat 5 72 0 31 44 0 0 chr5 28150207 28150252 -174935280 + AT_rich Low_complexity Low_complexity 1 45 0 7950 94 3 32 chr5 28150290 28152318 -174933214 + L1PA7 LINE L1 4159 6153 -1 418 316 66 60 chr5 28152318 28153027 -174932505 + L1M4c LINE L1 1035 1750 -4634 1224 144 0 0 chr5 28153074 28153247 -174932285 + AluSq SINE Alu 1 173 -140 203 211 0 14 chr5 28153247 28153318 -174932214 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 240 202 107 12 chr5 28153318 28153402 -174932130 - L1MC4 LINE L1 -1337 6705 6614 238 253 24 0 chr5 28153331 28153414 -174932118 + L1MC4 LINE L1 6615 6699 -1343 * 510 119 60 12 chr5 28153444 28153612 -174931920 + (TA)n Simple_repeat Simple_repeat 1 176 0 297 105 76 9 chr5 28153651 28153756 -174931776 + (TA)n Simple_repeat Simple_repeat 1 112 0 322 274 0 60 chr5 28153765 28153882 -174931650 + L1MC4 LINE L1 6595 6704 -1338 * 348 206 0 82 chr5 28153815 28153912 -174931620 - L1MC4 LINE L1 -1340 6702 6614 308 245 32 53 chr5 28153911 28154005 -174931527 + L1MC4 LINE L1 6612 6703 -1339 * 309 169 14 28 chr5 28153960 28154031 -174931501 - L1MCa LINE L1 -4359 1856 1787 225 175 0 32 chr5 28154059 28154122 -174931410 - L1MCa LINE L1 -4362 1853 1793 624 131 36 20 chr5 28154124 28154383 -174931149 + (TA)n Simple_repeat Simple_repeat 1 263 0 270 316 34 28 chr5 28154576 28154753 -174930779 + L1MEc LINE L1 1994 2171 -4225 259 214 0 0 chr5 28154758 28154814 -174930718 - L1MB1 LINE L1 -212 5956 5901 274 190 0 0 chr5 28154908 28154966 -174930566 - L1MCa LINE L1 -4714 1682 1625 22 35 0 0 chr5 28155444 28155473 -174930059 + AT_rich Low_complexity Low_complexity 1 29 0 217 326 23 12 chr5 28156756 28156842 -174928690 + MIR SINE MIR 52 138 -124 23 33 0 0 chr5 28157300 28157330 -174928202 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 28157512 28157542 -174927990 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 28159420 28159441 -174926091 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr5 28160652 28160694 -174924838 + AT_rich Low_complexity Low_complexity 1 42 0 21980 60 5 2 chr5 28160906 28164584 -174920948 - L1PA5 LINE L1 0 6154 2468 693 333 42 17 chr5 28164617 28164971 -174920561 - ERVL LTR ERVL -1210 4554 4192 555 301 31 51 chr5 28164984 28165276 -174920256 - ERVL LTR ERVL -1715 4049 3764 301 336 15 45 chr5 28165358 28165492 -174920040 - ERVL LTR ERVL -2039 3615 3486 864 323 33 17 chr5 28165549 28165992 -174919540 - ERVL LTR ERVL -2280 3484 2951 1216 214 157 10 chr5 28166777 28167071 -174918461 - MER1B DNA MER1_type 0 337 1 21 57 0 0 chr5 28167071 28167106 -174918426 + AT_rich Low_complexity Low_complexity 1 35 0 1478 254 17 42 chr5 28167272 28167744 -174917788 - MLT1C LTR MaLR 0 467 8 2542 49 3 0 chr5 28169057 28169361 -174916171 + AluY SINE Alu 1 305 -6 211 209 0 0 chr5 28169565 28169608 -174915924 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 292 138 0 chr5 28169758 28169888 -174915644 - MIR SINE MIR -59 203 56 2513 63 0 0 chr5 28170253 28170555 -174914977 - AluY SINE Alu -9 302 1 713 265 6 0 chr5 28170608 28170778 -174914754 - AluJb SINE Alu -8 304 134 22 35 0 0 chr5 28171346 28171375 -174914157 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 28171439 28171465 -174914067 + AT_rich Low_complexity Low_complexity 1 26 0 28 61 0 0 chr5 28171734 28171783 -174913749 + AT_rich Low_complexity Low_complexity 1 49 0 8168 154 16 41 chr5 28171879 28173377 -174912155 - THE1C-int LTR MaLR -117 1463 3 530 163 10 20 chr5 28173379 28173477 -174912055 - THE1C LTR MaLR 0 375 279 1143 226 23 39 chr5 28173487 28173796 -174911736 + MER31A LTR ERV1 173 476 -9 26 30 0 0 chr5 28174418 28174451 -174911081 + AT_rich Low_complexity Low_complexity 1 33 0 2149 86 131 0 chr5 28174756 28175070 -174910462 - THE1A LTR MaLR 0 355 1 11391 106 2 2 chr5 28175070 28176651 -174908881 - THE1A-int LTR MaLR 0 1580 1 2592 94 8 0 chr5 28176651 28177003 -174908529 - THE1A LTR MaLR 0 355 1 21 89 0 0 chr5 28177359 28177415 -174908117 + AT_rich Low_complexity Low_complexity 1 56 0 278 32 97 16 chr5 28177530 28177592 -174907940 + (TTATA)n Simple_repeat Simple_repeat 5 71 0 6407 112 80 8 chr5 28182177 28183377 -174902155 - LOR1-int LTR ERV1 -4314 3806 2520 304 420 8 0 chr5 28184405 28184524 -174901008 + L1MDb LINE L1 419 538 -5871 2519 214 74 7 chr5 28184575 28185268 -174900264 + L1MDb LINE L1 667 1405 -5004 222 43 0 64 chr5 28185383 28185451 -174900081 + (TTTA)n Simple_repeat Simple_repeat 1 107 0 222 43 0 64 chr5 28185451 28185498 -174900034 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 198 93 87 31 chr5 28185570 28185731 -174899801 + (TATAA)n Simple_repeat Simple_repeat 5 174 0 239 157 72 0 chr5 28185747 28185830 -174899702 + (TA)n Simple_repeat Simple_repeat 1 89 0 494 214 17 8 chr5 28186002 28186119 -174899413 - L1MD1 LINE L1 -25 6217 6100 1682 202 33 19 chr5 28186134 28186500 -174899032 + MER44D DNA MER2_type 14 384 -321 852 251 73 42 chr5 28187364 28187746 -174897786 + LTR52 LTR ERVL 25 418 -3 1882 92 22 4 chr5 28188003 28188275 -174897257 - AluSc SINE Alu -32 277 1 1214 250 60 60 chr5 28188375 28188854 -174896678 + MLT2B1 LTR ERVL 1 482 -38 225 94 0 0 chr5 28188854 28188886 -174896646 + (CA)n Simple_repeat Simple_repeat 1 32 0 1214 250 60 60 chr5 28188886 28188922 -174896610 + MLT2B1 LTR ERVL 481 516 -4 22 35 0 0 chr5 28189754 28189783 -174895749 + AT_rich Low_complexity Low_complexity 1 29 0 1465 181 178 3 chr5 28189792 28190151 -174895381 - MSTA LTR MaLR 0 428 7 870 172 20 0 chr5 28191566 28191717 -174893815 + MER44D DNA MER2_type 580 605 0 2520 244 107 38 chr5 28191721 28191775 -174893757 - L1MD2 LINE L1 -152 6601 6552 251 28 28 0 chr5 28191775 28191811 -174893721 + (TG)n Simple_repeat Simple_repeat 1 37 0 2520 244 107 38 chr5 28191811 28193781 -174891751 - L1MD2 LINE L1 -201 6552 4423 3029 208 48 21 chr5 28193811 28194675 -174890857 - L1MD2 LINE L1 -4857 1683 801 307 420 8 0 chr5 28194726 28194845 -174890687 - L1MD2 LINE L1 -5871 672 553 293 313 101 52 chr5 28195074 28195362 -174890170 + MLT1J LTR MaLR 132 433 -78 1135 283 10 0 chr5 28195907 28196200 -174889332 + MLT1E2 LTR MaLR 331 626 0 276 358 32 8 chr5 28196799 28196922 -174888610 + MIR SINE MIR 20 145 -63 276 30 0 0 chr5 28198034 28198067 -174887465 + (TG)n Simple_repeat Simple_repeat 2 34 0 287 337 91 25 chr5 28198752 28198951 -174886581 + L2 LINE L2 2814 3025 -288 232 273 57 23 chr5 28199062 28199150 -174886382 + L2 LINE L2 3171 3261 -52 1997 94 14 3 chr5 28200749 28201036 -174884496 - AluSg SINE Alu -20 290 1 1693 205 67 29 chr5 28201074 28201566 -174883966 + MER9 LTR ERVK 1 511 0 267 235 15 0 chr5 28202146 28202214 -174883318 + (TA)n Simple_repeat Simple_repeat 2 70 0 202 244 56 100 chr5 28203583 28203673 -174881859 + MIR3 SINE MIR 87 172 -36 2780 53 123 0 chr5 28203755 28204154 -174881378 + LTR7 LTR ERV1 1 448 -2 758 285 102 35 chr5 28205169 28205799 -174879733 + L1ME LINE L1 528 1256 -4824 297 0 0 0 chr5 28205799 28205832 -174879700 + (CA)n Simple_repeat Simple_repeat 2 34 0 758 285 102 35 chr5 28205832 28206167 -174879365 + L1ME LINE L1 1256 1567 -4513 29 0 0 0 chr5 28206486 28206515 -174879017 + AT_rich Low_complexity Low_complexity 1 29 0 288 284 8 15 chr5 28206602 28206736 -174878796 - L1M4 LINE L1 -2146 4236 4104 580 232 58 7 chr5 28206737 28206875 -174878657 - L1MD2 LINE L1 -6370 170 26 573 128 11 0 chr5 28207120 28207214 -174878318 - L1PA3 LINE L1 -3 6152 6058 534 228 121 31 chr5 28207482 28207772 -174877760 - L1M4 LINE L1 -4030 2354 2039 842 236 0 116 chr5 28207810 28208094 -174877438 - MLT1A2 LTR MaLR -123 251 1 27 0 0 0 chr5 28209626 28209653 -174875879 + AT_rich Low_complexity Low_complexity 1 27 0 30 45 0 0 chr5 28209742 28209786 -174875746 + AT_rich Low_complexity Low_complexity 1 44 0 453 310 27 11 chr5 28210667 28210851 -174874681 + MER20 DNA MER1_type 33 219 0 2067 124 0 34 chr5 28211357 28211680 -174873852 + AluSq SINE Alu 1 312 -1 4957 211 46 36 chr5 28213146 28215315 -174870217 - L1MC1 LINE L1 -17 6316 4127 2448 62 0 0 chr5 28215835 28216144 -174869388 + AluY SINE Alu 1 309 -2 33 43 0 0 chr5 28216438 28216485 -174869047 + AT_rich Low_complexity Low_complexity 1 47 0 311 164 107 66 chr5 28216800 28216922 -174868610 + HAL1b LINE L1 1080 1206 -142 450 250 28 7 chr5 28217161 28217305 -174868227 + L1M4 LINE L1 3804 3950 -2196 2319 98 0 0 chr5 28217863 28218158 -174867374 + AluSx SINE Alu 6 300 -12 1773 180 8 42 chr5 28218299 28218654 -174866878 - MER2 DNA MER2_type -2 343 1 261 0 0 0 chr5 28219848 28219877 -174865655 + (TG)n Simple_repeat Simple_repeat 2 30 0 24 96 0 0 chr5 28220638 28220711 -174864821 + AT_rich Low_complexity Low_complexity 1 73 0 287 223 65 93 chr5 28222699 28222838 -174862694 + MER104 DNA Tc2 2 136 -44 1168 121 6 6 chr5 28223032 28223205 -174862327 + AluSp SINE Alu 126 298 -15 337 242 181 40 chr5 28223701 28223850 -174861682 + MER5B DNA MER1_type 2 171 -7 23 97 0 0 chr5 28223908 28223980 -174861552 + AT_rich Low_complexity Low_complexity 1 72 0 659 237 29 23 chr5 28224170 28224343 -174861189 - MER58A DNA MER1_type -3 221 48 2285 80 14 39 chr5 28227074 28227438 -174858094 + L1PA8 LINE L1 5818 6172 0 21 89 0 0 chr5 28227447 28227503 -174858029 + AT_rich Low_complexity Low_complexity 1 56 0 6253 147 34 33 chr5 28227922 28228111 -174857421 - Tigger3b DNA MER2_type -1797 1231 1044 2374 59 16 13 chr5 28228111 28228416 -174857116 + AluY SINE Alu 1 306 -5 6253 147 34 33 chr5 28228416 28229454 -174856078 - Tigger3b DNA MER2_type -1984 1044 3 240 180 49 49 chr5 28229853 28229914 -174855618 - MLT1I LTR MaLR 0 409 349 1136 230 125 26 chr5 28230915 28231219 -174854313 - MLT1A1 LTR MaLR -31 334 1 1715 159 161 11 chr5 28231237 28231609 -174853923 + MSTA LTR MaLR 1 428 0 22 35 0 0 chr5 28231619 28231648 -174853884 + AT_rich Low_complexity Low_complexity 1 29 0 1292 255 50 60 chr5 28232486 28232522 -174853010 - MLT2B1 LTR ERVL -4 516 481 225 94 0 0 chr5 28232522 28232554 -174852978 + (TG)n Simple_repeat Simple_repeat 1 32 0 1292 255 50 60 chr5 28232554 28233038 -174852494 - MLT2B1 LTR ERVL -39 481 1 2011 103 4 4 chr5 28233139 28233420 -174852112 + AluSc SINE Alu 1 281 -28 1105 263 53 33 chr5 28233681 28234076 -174851456 - LTR52 LTR ERVL -3 418 16 330 156 0 0 chr5 28234847 28234911 -174850621 + (TG)n Simple_repeat Simple_repeat 1 64 0 207 0 0 0 chr5 28235841 28235864 -174849668 + (GA)n Simple_repeat Simple_repeat 2 24 0 34 65 0 0 chr5 28235996 28236058 -174849474 + AT_rich Low_complexity Low_complexity 1 62 0 1962 99 62 0 chr5 28236074 28236347 -174849185 + AluSx SINE Alu 1 290 -22 194 371 149 4 chr5 28238129 28238404 -174847128 - L2 LINE L2 -107 3165 2851 306 0 0 0 chr5 28238472 28238498 -174847034 + (TG)n Simple_repeat Simple_repeat 1 60 0 306 0 0 0 chr5 28238498 28238532 -174847000 + (TG)n Simple_repeat Simple_repeat 1 34 0 24 0 0 0 chr5 28239193 28239217 -174846315 + AT_rich Low_complexity Low_complexity 1 24 0 6485 85 35 38 chr5 28239909 28240944 -174844588 - L1PA7 LINE L1 -755 5391 4360 5664 66 5 1 chr5 28240944 28241687 -174843845 + L1PA7 LINE L1 5404 6151 -3 3307 123 14 41 chr5 28241687 28242029 -174843503 + L1PA14 LINE L1 5481 5831 -330 2198 89 0 0 chr5 28242029 28242309 -174843223 + AluSg SINE Alu 1 280 -30 459 0 0 0 chr5 28242312 28242363 -174843169 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 3307 123 14 41 chr5 28242363 28242577 -174842955 + L1PA14 LINE L1 5833 6026 -135 554 227 161 36 chr5 28242848 28243167 -174842365 - MLT1G1 LTR MaLR -182 380 1 592 265 27 58 chr5 28243600 28243823 -174841709 - LTR16C LTR ERVL -94 397 182 355 109 47 16 chr5 28244619 28244683 -174840849 + HERVL LTR ERVL 558 623 -5031 26 0 0 0 chr5 28244720 28244746 -174840786 + AT_rich Low_complexity Low_complexity 1 26 0 259 351 54 0 chr5 28245532 28245643 -174839889 + MIR SINE MIR 25 141 -67 1164 218 16 4 chr5 28245935 28246187 -174839345 - MSTB LTR MaLR -165 261 7 5081 194 18 10 chr5 28246194 28247179 -174838353 - HERVL-B1 LTR ERVL -4643 1011 19 308 121 0 121 chr5 28247208 28247252 -174838280 - MLT2B1 LTR ERVL 0 520 489 279 0 0 0 chr5 28247252 28247283 -174838249 + (CA)n Simple_repeat Simple_repeat 2 32 0 308 121 0 121 chr5 28247283 28247321 -174838211 - MLT2B1 LTR ERVL -31 489 448 733 153 0 0 chr5 28247324 28247435 -174838097 - ERVL LTR ERVL -4856 908 798 969 226 27 93 chr5 28247447 28247995 -174837537 - MLT2A2 LTR ERVL -40 514 1 2204 105 105 28 chr5 28248282 28248324 -174837208 + L1MA3 LINE L1 5884 5921 -384 2885 106 48 33 chr5 28248324 28248806 -174836726 - LTR22B LTR ERVK -3 489 1 2204 105 105 28 chr5 28248806 28249155 -174836377 + L1MA3 LINE L1 5921 6305 0 23 0 0 0 chr5 28249155 28249178 -174836354 + AT_rich Low_complexity Low_complexity 1 23 0 1826 213 14 16 chr5 28249421 28249788 -174835744 + MLT1A2 LTR MaLR 7 372 -2 24 0 0 0 chr5 28250460 28250484 -174835048 + AT_rich Low_complexity Low_complexity 1 24 0 637 203 25 0 chr5 28250599 28250717 -174834815 + MLT1A2 LTR MaLR 6 126 -248 400 232 107 55 chr5 28251010 28251337 -174834195 + L1M4 LINE L1 4334 4677 -1469 22 0 0 0 chr5 28251346 28251368 -174834164 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr5 28251565 28251606 -174833926 + AT_rich Low_complexity Low_complexity 1 41 0 2094 149 22 8 chr5 28252172 28252527 -174833005 + THE1B LTR MaLR 3 362 -2 7201 157 19 9 chr5 28253012 28254299 -174831233 - HSMAR2 DNA Mariner -1 1301 3 2409 74 0 0 chr5 28254548 28254844 -174830688 + AluY SINE Alu 1 296 -15 259 254 0 0 chr5 28254845 28254908 -174830624 + MER53 DNA DNA 26 88 -101 377 246 98 0 chr5 28254999 28255121 -174830411 + L1MA9 LINE L1 6169 6302 -10 252 152 65 0 chr5 28255136 28255182 -174830350 - MER53 DNA DNA -140 49 1 599 322 48 9 chr5 28255221 28255448 -174830084 - MIR SINE MIR -8 254 19 616 295 54 75 chr5 28256150 28256628 -174828904 + MLT1H LTR MaLR 25 492 -57 1867 120 73 0 chr5 28256676 28256951 -174828581 - AluSc SINE Alu -14 295 1 207 114 0 0 chr5 28257070 28257105 -174828427 + (CAT)n Simple_repeat Simple_repeat 2 36 0 754 240 211 71 chr5 28257268 28257771 -174827761 + MLT1F1 LTR MaLR 1 567 0 24 32 0 0 chr5 28258140 28258171 -174827361 + AT_rich Low_complexity Low_complexity 1 31 0 28 99 0 0 chr5 28258265 28258356 -174827176 + AT_rich Low_complexity Low_complexity 1 91 0 22 0 0 0 chr5 28258822 28258844 -174826688 + AT_rich Low_complexity Low_complexity 1 22 0 640 237 5 0 chr5 28258844 28259059 -174826473 - AluYa5 SINE Alu 0 311 96 7552 48 1 1 chr5 28259159 28260829 -174824703 - L1PA5 LINE L1 -46 6108 4439 2718 162 100 42 chr5 28260835 28261423 -174824109 - L1M1 LINE L1 -5130 2435 1814 340 275 11 0 chr5 28263503 28263594 -174821938 + L2 LINE L2 2456 2547 -767 245 278 22 33 chr5 28263596 28263686 -174821846 - LTR16A1 LTR ERVL -3 454 366 511 271 24 24 chr5 28264153 28264289 -174821243 - L1MA10 LINE L1 -41 6293 6155 243 61 0 0 chr5 28264289 28264322 -174821210 + (TG)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 28264322 28264355 -174821177 - L1MA10 LINE L1 -178 6156 6124 6876 48 14 8 chr5 28264380 28265339 -174820193 + L1PA5 LINE L1 5183 6146 -8 2382 140 12 22 chr5 28265342 28265755 -174819777 + L1P4 LINE L1 5315 5723 -443 2912 218 19 8 chr5 28265769 28266412 -174819120 - L1MB1 LINE L1 -160 6029 5380 288 248 26 17 chr5 28267398 28267515 -174818017 + (TA)n Simple_repeat Simple_repeat 1 118 0 1238 213 109 30 chr5 28268392 28268730 -174816802 - MLT1A1 LTR MaLR 0 365 1 335 143 31 10 chr5 28268920 28269018 -174816514 + (TA)n Simple_repeat Simple_repeat 1 100 0 183 387 16 0 chr5 28269484 28269546 -174815986 + L2 LINE L2 2207 2269 -1045 21 0 0 0 chr5 28269607 28269628 -174815904 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 28269717 28269738 -174815794 + AT_rich Low_complexity Low_complexity 1 21 0 204 339 0 0 chr5 28271108 28271173 -174814359 + CT-rich Low_complexity Low_complexity 3 67 0 207 0 0 0 chr5 28271354 28271377 -174814155 + (TTTTTA)n Simple_repeat Simple_repeat 3 25 0 30 0 0 0 chr5 28273008 28273038 -174812494 + AT_rich Low_complexity Low_complexity 1 30 0 1466 147 126 4 chr5 28274767 28275145 -174810387 + MER1A DNA MER1_type 57 519 -14 32 67 0 0 chr5 28275503 28275563 -174809969 + AT_rich Low_complexity Low_complexity 1 60 0 229 258 97 32 chr5 28276084 28276177 -174809355 - MLT1L LTR MaLR -516 99 1 217 174 22 0 chr5 28276798 28276844 -174808688 + T-rich Low_complexity Low_complexity 4 50 0 310 261 142 8 chr5 28277609 28277743 -174807789 - MER67D LTR ERV1 -4 510 359 974 226 67 46 chr5 28277755 28278038 -174807494 - MER67C LTR ERV1 -307 403 115 3772 134 5 15 chr5 28278038 28278700 -174806832 + L1PA14 LINE L1 5187 5841 -320 3366 96 14 2 chr5 28278700 28279180 -174806352 + L1PA14 LINE L1 5666 6160 -1 700 203 49 0 chr5 28279180 28279323 -174806209 - MER67D LTR ERV1 -364 150 1 42381 37 23 2 chr5 28279549 28285341 -174800191 + L1PA3 LINE L1 3 5923 -232 1530 39 0 0 chr5 28285441 28285621 -174799911 - AluY SINE Alu -131 180 1 1704 260 9 0 chr5 28285621 28286075 -174799457 - L1M4 LINE L1 -874 5272 4815 1164 258 37 38 chr5 28287061 28287603 -174797929 - MLT2F LTR ERVL -60 603 9 758 252 104 43 chr5 28287611 28288004 -174797528 - ERVL-F LTR ERVL -18 5746 5330 21 0 0 0 chr5 28288172 28288193 -174797339 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 28288303 28288340 -174797192 + AT_rich Low_complexity Low_complexity 1 37 0 414 56 0 0 chr5 28288846 28288900 -174796632 - MADE1 DNA Mariner -1 79 26 212 189 0 19 chr5 28291135 28291188 -174794344 + A-rich Low_complexity Low_complexity 5 56 0 1712 111 58 4 chr5 28291303 28291564 -174793968 + AluSx SINE Alu 22 296 -16 24 91 0 0 chr5 28292397 28292463 -174793069 + AT_rich Low_complexity Low_complexity 1 66 0 605 255 129 57 chr5 28292476 28292767 -174792765 + MLT1A2 LTR MaLR 1 323 -51 2107 78 4 4 chr5 28292767 28293038 -174792494 - AluSc SINE Alu -13 296 26 605 255 129 57 chr5 28293038 28293095 -174792437 + MLT1A2 LTR MaLR 323 374 0 2370 74 0 3 chr5 28294335 28294634 -174790898 + AluY SINE Alu 2 299 -12 229 180 0 20 chr5 28294769 28294819 -174790713 - MER58 DNA MER1_type -8 2412 2364 209 300 100 14 chr5 28294866 28294936 -174790596 - MIR SINE MIR -180 82 7 210 229 73 94 chr5 28295185 28295281 -174790251 - L2 LINE L2 -12 3260 3167 262 269 30 75 chr5 28295296 28295430 -174790102 + MIR SINE MIR 13 140 -122 213 214 0 0 chr5 28295466 28295508 -174790024 + A-rich Low_complexity Low_complexity 3 44 0 2439 50 9 31 chr5 28295788 28296106 -174789426 + AluY SINE Alu 1 311 0 2068 107 6 31 chr5 28296448 28296767 -174788765 + AluY SINE Alu 1 311 0 1518 170 131 6 chr5 28296958 28297313 -174788219 + MSTA LTR MaLR 1 428 0 541 285 57 45 chr5 28297317 28297609 -174787923 - MLT1E1 LTR MaLR -21 633 275 908 301 81 22 chr5 28298002 28298521 -174787011 + L2 LINE L2 2182 2780 -534 837 229 0 0 chr5 28298525 28298678 -174786854 - FRAM SINE Alu -23 153 1 240 86 0 0 chr5 28299390 28299425 -174786107 + (ATG)n Simple_repeat Simple_repeat 1 35 0 225 291 18 0 chr5 28299848 28299903 -174785629 - MLT1K LTR MaLR -348 240 185 366 340 26 13 chr5 28299979 28300135 -174785397 - L2 LINE L2 -2 3311 3154 369 322 24 29 chr5 28300298 28300506 -174785026 + L1M4 LINE L1 4614 4820 -1326 22 56 0 0 chr5 28300667 28300703 -174784829 + AT_rich Low_complexity Low_complexity 1 36 0 1819 150 29 0 chr5 28301013 28301338 -174784194 + AluSx SINE Alu 1 333 0 1171 201 94 4 chr5 28301342 28301586 -174783946 - AluJo SINE Alu -30 282 17 1504 206 26 84 chr5 28301762 28301816 -174783716 + MER67D LTR ERV1 1 57 -457 318 26 0 0 chr5 28301816 28301855 -174783677 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1504 206 26 84 chr5 28301855 28302252 -174783280 + MER67D LTR ERV1 57 425 -89 2042 175 37 30 chr5 28302252 28302802 -174782730 - MLT2A2 LTR ERVL 0 554 1 2992 177 37 6 chr5 28303000 28303622 -174781910 - L1MA4 LINE L1 -2 6298 5658 22 0 0 0 chr5 28303949 28303971 -174781561 + AT_rich Low_complexity Low_complexity 1 22 0 184 282 154 0 chr5 28304702 28304755 -174780777 - MIR SINE MIR -2 260 217 243 0 0 0 chr5 28304755 28304782 -174780750 + (TG)n Simple_repeat Simple_repeat 2 28 0 184 282 154 0 chr5 28304782 28304838 -174780694 - MIR SINE MIR -45 217 134 6944 208 137 11 chr5 28305171 28306796 -174778736 - MER52A LTR ERV1 -9 1746 21 307 224 0 40 chr5 28307314 28307390 -174778142 - MER52A LTR ERV1 -1682 73 1 1157 144 64 5 chr5 28307392 28307579 -174777953 - MER52A-int LTR ERV1 -2 7089 6892 410 57 0 0 chr5 28307577 28307630 -174777902 - MER52A-int LTR ERV1 -1177 6028 5976 * 762 158 80 34 chr5 28307634 28307943 -174777589 - MER41-int LTR ERV1 -1256 4690 4298 1299 180 176 28 chr5 28308586 28309019 -174776513 - LTR54B LTR ERV1 -1 497 1 26 50 0 0 chr5 28309118 28309158 -174776374 + AT_rich Low_complexity Low_complexity 1 40 0 240 261 65 0 chr5 28309835 28309927 -174775605 - MIR SINE MIR -28 234 137 267 337 121 33 chr5 28309972 28310245 -174775287 - MLT1J2 LTR MaLR -41 409 113 442 284 35 21 chr5 28310352 28310493 -174775039 - MIR SINE MIR -117 145 3 1046 210 63 52 chr5 28312962 28313248 -174772284 + AluJb SINE Alu 1 289 -13 240 250 0 38 chr5 28313259 28313339 -174772193 + L1MC4 LINE L1 6636 6712 -1330 55 62 0 0 chr5 28314424 28314521 -174771011 + AT_rich Low_complexity Low_complexity 1 97 0 23 33 0 0 chr5 28314939 28314969 -174770563 + AT_rich Low_complexity Low_complexity 1 30 0 213 279 35 35 chr5 28315179 28315265 -174770267 - L2 LINE L2 -2 3270 3185 30 59 0 0 chr5 28317749 28317800 -174767732 + AT_rich Low_complexity Low_complexity 1 51 0 185 0 40 0 chr5 28318194 28318219 -174767313 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 614 308 81 45 chr5 28318367 28318729 -174766803 + MLT1G LTR MaLR 1 354 -176 413 240 64 8 chr5 28318728 28318853 -174766679 + MLT1G LTR MaLR 457 588 -2 * 304 373 8 0 chr5 28318901 28319019 -174766513 - L2 LINE L2 -970 2344 2226 2541 20 0 7 chr5 28319799 28320096 -174765436 - AluY SINE Alu -16 295 1 326 337 49 16 chr5 28320541 28320725 -174764807 + L1MEd LINE L1 962 1151 -4968 318 289 146 29 chr5 28320747 28320986 -174764546 + L1MEd LINE L1 1228 1494 -4816 579 305 81 40 chr5 28321169 28321210 -174764322 + MLT1L LTR MaLR 171 209 -406 1811 110 3 51 chr5 28321210 28321502 -174764030 + AluSx SINE Alu 1 278 -34 579 305 81 40 chr5 28321502 28321880 -174763652 + MLT1L LTR MaLR 209 607 -8 1817 152 53 22 chr5 28323437 28323793 -174761739 + L1PA16 LINE L1 5791 6157 -9 27 49 0 0 chr5 28323795 28323836 -174761696 + AT_rich Low_complexity Low_complexity 1 41 0 1752 215 90 35 chr5 28323839 28324318 -174761214 - MLT1D LTR MaLR 0 505 1 24 0 0 0 chr5 28324850 28324874 -174760658 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr5 28324997 28325030 -174760502 + AT_rich Low_complexity Low_complexity 1 33 0 2139 82 0 36 chr5 28325129 28325435 -174760097 - AluY SINE Alu -16 295 1 12586 185 36 17 chr5 28325435 28326677 -174758855 - L1MA2 LINE L1 -18 7705 6488 2203 127 0 0 chr5 28326677 28326984 -174758548 - AluSg SINE Alu -3 307 1 12586 185 36 17 chr5 28326984 28330181 -174755351 - L1MA2 LINE L1 -1235 6488 3169 5024 112 19 29 chr5 28330192 28330517 -174755015 - L1PB1 LINE L1 -5 6862 6535 2754 31 0 3 chr5 28330517 28330836 -174754696 - AluYb8 SINE Alu 0 318 1 5024 112 19 29 chr5 28330836 28331329 -174754203 - L1PB1 LINE L1 -332 6535 6052 * 11320 178 93 18 chr5 28331323 28331979 -174753553 - L1PB1 LINE L1 -1089 5773 5168 189 0 0 0 chr5 28331979 28332000 -174753532 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 11320 178 93 18 chr5 28332000 28336290 -174749242 - L1PB1 LINE L1 -1694 5168 1 2543 143 9 83 chr5 28336299 28336616 -174748916 - L1MA2 LINE L1 -4387 3178 2920 1983 143 0 3 chr5 28336616 28336909 -174748623 + AluSq SINE Alu 1 292 -21 2543 143 9 83 chr5 28336909 28337159 -174748373 - L1MA2 LINE L1 -4645 2920 2653 328 233 0 0 chr5 28337163 28337223 -174748309 - L1MA2 LINE L1 -5672 1893 1834 7958 208 33 8 chr5 28337323 28337465 -174748067 - L1MA2 LINE L1 -5975 1590 1453 350 0 44 0 chr5 28337465 28337510 -174748022 + (CTATT)n Simple_repeat Simple_repeat 2 48 0 7958 208 33 8 chr5 28337510 28338900 -174746632 - L1MA2 LINE L1 -6112 1453 19 513 161 73 3 chr5 28339283 28339394 -174746138 + L1MA9 LINE L1 6166 6282 -18 997 174 20 49 chr5 28340976 28341223 -174744309 - L1MC1 LINE L1 0 6333 6094 17147 60 1 1 chr5 28341538 28344562 -174740970 + L1PA5 LINE L1 3131 6154 0 21 0 0 0 chr5 28344926 28344947 -174740585 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 28344986 28345015 -174740517 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 28345174 28345203 -174740329 + AT_rich Low_complexity Low_complexity 1 29 0 708 182 8 0 chr5 28345328 28345460 -174740072 + FLAM_C SINE Alu 1 133 0 204 290 0 0 chr5 28345476 28345538 -174739994 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 269 271 75 37 chr5 28345568 28345675 -174739857 - L2 LINE L2 -16 3297 3187 26 50 0 0 chr5 28346080 28346120 -174739412 + AT_rich Low_complexity Low_complexity 1 40 0 2269 105 3 10 chr5 28346340 28346654 -174738878 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 28346701 28346725 -174738807 + AT_rich Low_complexity Low_complexity 1 24 0 29 47 0 0 chr5 28347332 28347375 -174738157 + AT_rich Low_complexity Low_complexity 1 43 0 282 95 0 0 chr5 28347508 28347550 -174737982 + (TC)n Simple_repeat Simple_repeat 1 42 0 25 90 0 0 chr5 28347957 28348024 -174737508 + AT_rich Low_complexity Low_complexity 1 67 0 468 231 26 0 chr5 28348527 28348644 -174736888 - L1MA8 LINE L1 0 6291 6172 * 1310 171 12 4 chr5 28348633 28348879 -174736653 + L1MA8 LINE L1 5910 6157 -134 219 36 0 0 chr5 28349527 28349555 -174735977 + (CA)n Simple_repeat Simple_repeat 2 29 0 27 29 0 0 chr5 28350114 28350148 -174735384 + AT_rich Low_complexity Low_complexity 1 34 0 5174 223 27 26 chr5 28350732 28353173 -174732359 + L1MC1 LINE L1 3884 6324 -9 208 231 22 66 chr5 28354115 28354206 -174731326 - MIR SINE MIR -54 208 122 713 288 5 26 chr5 28355102 28355293 -174730239 - Tigger3(Golem) DNA MER2_type -2842 187 1 22 0 0 0 chr5 28355519 28355541 -174729991 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 28356721 28356742 -174728790 + AT_rich Low_complexity Low_complexity 1 21 0 683 147 202 23 chr5 28356765 28356894 -174728638 - AluSg/x SINE Alu -24 288 137 388 93 27 0 chr5 28356894 28356969 -174728563 + (TA)n Simple_repeat Simple_repeat 1 77 0 1924 123 5 115 chr5 28357999 28358373 -174727159 - MER1B DNA MER1_type -4 335 3 1963 74 0 0 chr5 28358730 28359009 -174726523 - AluY SINE Alu 0 317 39 1710 172 40 0 chr5 28359358 28359655 -174725877 - AluJb SINE Alu -3 309 1 41 21 0 0 chr5 28359716 28359764 -174725768 + AT_rich Low_complexity Low_complexity 1 48 0 275 302 28 0 chr5 28363189 28363295 -174722237 + HsTC2 DNA Tc2 4 112 -1786 266 307 78 30 chr5 28363524 28363690 -174721842 + L2 LINE L2 1836 2009 -1305 1512 236 20 9 chr5 28364625 28364969 -174720563 + MLT2C1 LTR ERVL 2 349 -48 290 87 22 0 chr5 28364974 28365020 -174720512 + (TC)n Simple_repeat Simple_repeat 1 47 0 275 203 0 0 chr5 28365032 28365091 -174720441 + MLT2C1 LTR ERVL 462 520 0 237 288 59 20 chr5 28365258 28365411 -174720121 + L1M2c LINE L1 1822 1980 -4809 304 244 31 75 chr5 28365433 28365593 -174719939 + L1MEc LINE L1 1178 1330 -5066 24 32 0 0 chr5 28365718 28365749 -174719783 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr5 28365861 28365902 -174719630 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 28366470 28366499 -174719033 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr5 28366949 28366970 -174718562 + (A)n Simple_repeat Simple_repeat 1 21 0 263 356 25 0 chr5 28367215 28367333 -174718199 - L2 LINE L2 -852 2462 2342 398 237 58 64 chr5 28367497 28367670 -174717862 + MLT1H LTR MaLR 3 174 -375 244 302 107 65 chr5 28368968 28369183 -174716349 - LTR16A LTR ERVL -202 248 25 265 277 66 36 chr5 28369243 28369380 -174716152 + MLT1H LTR MaLR 3 143 -406 2314 68 0 7 chr5 28369431 28369723 -174715809 + AluY SINE Alu 3 292 -19 232 188 94 16 chr5 28369905 28369969 -174715563 + MLT1H LTR MaLR 481 549 0 25 0 0 0 chr5 28370007 28370032 -174715500 + AT_rich Low_complexity Low_complexity 1 25 0 243 156 13 52 chr5 28370569 28370646 -174714886 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 225 146 0 0 chr5 28370667 28370708 -174714824 - LTR66 LTR ERVL -172 438 398 230 242 22 22 chr5 28370712 28370803 -174714729 + L1MC4 LINE L1 6614 6704 -1338 540 130 16 49 chr5 28370819 28371004 -174714528 + (TA)n Simple_repeat Simple_repeat 2 180 0 216 196 11 22 chr5 28371020 28371112 -174714420 + (TA)n Simple_repeat Simple_repeat 2 92 0 27 49 0 0 chr5 28371994 28372035 -174713497 + AT_rich Low_complexity Low_complexity 1 41 0 2840 10 0 0 chr5 28373162 28373474 -174712058 - AluYb8 SINE Alu -6 312 1 22 70 0 0 chr5 28373501 28373544 -174711988 + AT_rich Low_complexity Low_complexity 1 43 0 24 77 0 0 chr5 28374623 28374675 -174710857 + AT_rich Low_complexity Low_complexity 1 52 0 208 286 22 11 chr5 28374863 28374954 -174710578 + (TA)n Simple_repeat Simple_repeat 1 92 0 1298 231 19 53 chr5 28375522 28375898 -174709634 - MLT1A1 LTR MaLR -2 363 1 237 268 0 14 chr5 28376513 28376584 -174708948 + (TA)n Simple_repeat Simple_repeat 2 71 0 24 53 0 0 chr5 28376782 28376820 -174708712 + AT_rich Low_complexity Low_complexity 1 38 0 1794 167 44 101 chr5 28377557 28378012 -174707520 - MSTB1 LTR MaLR 0 432 4 237 242 0 0 chr5 28378715 28378781 -174706751 + L1ME LINE L1 5757 5822 -348 11542 173 15 7 chr5 28378851 28381942 -174703590 + L1PA12 LINE L1 2958 6074 -94 36 40 0 0 chr5 28382047 28382097 -174703435 + AT_rich Low_complexity Low_complexity 1 50 0 26 69 0 35 chr5 28382337 28382424 -174703108 + AT_rich Low_complexity Low_complexity 1 84 0 291 157 0 0 chr5 28383266 28383317 -174702215 + A-rich Low_complexity Low_complexity 1 51 0 216 97 0 0 chr5 28383334 28383365 -174702167 + (TG)n Simple_repeat Simple_repeat 2 32 0 3024 230 22 18 chr5 28383365 28384040 -174701492 - ERVL LTR ERVL -3852 1912 1235 183 80 0 0 chr5 28384040 28384065 -174701467 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 434 62 0 0 chr5 28384067 28384131 -174701401 - Alu SINE Alu -2 308 245 2229 211 17 6 chr5 28384176 28384645 -174700887 + ERVL LTR ERVL 766 1239 -4525 1927 70 12 12 chr5 28384653 28384911 -174700621 + AluSq SINE Alu 1 258 -55 1396 193 23 36 chr5 28384911 28385208 -174700324 + MER61A LTR ERV1 49 343 0 471 72 0 0 chr5 28385264 28385333 -174700199 - AluS SINE Alu -244 69 1 27 0 0 0 chr5 28386041 28386068 -174699464 + AT_rich Low_complexity Low_complexity 1 27 0 1318 187 142 89 chr5 28387104 28387521 -174698011 - Tigger2 DNA MER2_type 0 2718 2280 341 229 0 0 chr5 28387526 28387587 -174697945 + MER8 DNA MER2_type 179 239 0 703 230 52 17 chr5 28390893 28391067 -174694465 - MER20 DNA MER1_type -38 181 2 9539 184 41 29 chr5 28391615 28393242 -174692290 - L1PA13 LINE L1 0 6163 4557 3559 71 2 0 chr5 28393242 28393694 -174691838 - MLT2A2 LTR ERVL 0 453 1 9539 184 41 29 chr5 28393694 28394963 -174690569 - L1PA13 LINE L1 -1606 4557 3224 2097 100 0 7 chr5 28394963 28395272 -174690260 - AluSc SINE Alu 0 307 1 9539 184 41 29 chr5 28395272 28395443 -174690089 - L1PA13 LINE L1 -2939 3224 3057 3997 191 8 0 chr5 28395460 28396220 -174689312 + L1P LINE L1 1924 2689 -3457 1397 246 66 0 chr5 28398082 28398431 -174687101 + MER67D LTR ERV1 5 376 -138 1756 159 55 0 chr5 28398589 28398878 -174686654 - AluSg SINE Alu -3 307 3 26 0 0 0 chr5 28398888 28398914 -174686618 + AT_rich Low_complexity Low_complexity 1 26 0 2953 96 41 2 chr5 28399263 28399699 -174685833 - MLT2A2 LTR ERVL 0 453 1 26 82 0 0 chr5 28399786 28399847 -174685685 + AT_rich Low_complexity Low_complexity 1 61 0 619 298 64 34 chr5 28400410 28400705 -174684827 - LTR16C LTR ERVL 0 491 188 15621 112 47 23 chr5 28400828 28403196 -174682336 + Charlie3 DNA MER1_type 1 2424 -286 1907 139 7 19 chr5 28403296 28403605 -174681927 + Charlie3 DNA MER1_type 2402 2706 -4 241 327 29 0 chr5 28404102 28404206 -174681326 - L2 LINE L2 -1292 2022 1916 408 336 92 37 chr5 28404953 28405280 -174680252 + L1ME LINE L1 5450 5794 -327 1765 152 18 11 chr5 28405322 28405634 -174679898 + AluSx SINE Alu 1 314 0 789 219 122 15 chr5 28405710 28405936 -174679596 - AluJo SINE Alu 0 312 66 1796 131 7 18 chr5 28406276 28406597 -174678935 - AluSx SINE Alu 0 321 4 3956 171 30 52 chr5 28408196 28409076 -174676456 + L1MB3 LINE L1 5322 6181 -2 23 0 0 0 chr5 28410280 28410303 -174675229 + AT_rich Low_complexity Low_complexity 1 23 0 1588 216 39 23 chr5 28412501 28412885 -174672647 + MLT1B LTR MaLR 1 390 0 11368 207 34 31 chr5 28413419 28414552 -174670980 - L1 LINE L1 -909 5237 4109 317 89 0 0 chr5 28414552 28414597 -174670935 - MADE1 DNA Mariner -35 45 1 11368 207 34 31 chr5 28414597 28415010 -174670522 - L1 LINE L1 -2037 4109 3699 2163 128 10 0 chr5 28415010 28415316 -174670216 - AluSx SINE Alu -2 310 2 11368 207 34 31 chr5 28415316 28415343 -174670189 - L1 LINE L1 -2447 3699 3674 1612 201 28 3 chr5 28415343 28415662 -174669870 - L1PB4 LINE L1 -5 6151 5825 11368 207 34 31 chr5 28415662 28416971 -174668561 - L1 LINE L1 -2472 3674 2300 305 253 160 38 chr5 28417061 28417298 -174668234 - L1M4 LINE L1 -1074 5072 4807 7775 18 0 0 chr5 28417450 28418972 -174666560 + L1PA3 LINE L1 4634 6151 -4 507 303 17 27 chr5 28418977 28419274 -174666258 + L1ME LINE L1 5317 5610 -552 24 0 0 0 chr5 28419394 28419418 -174666114 + AT_rich Low_complexity Low_complexity 1 24 0 965 320 38 12 chr5 28420740 28421159 -174664373 - HERV16 LTR ERVL -3728 1268 839 879 319 81 23 chr5 28421471 28421903 -174663629 - LTR16B LTR ERVL 0 464 8 270 352 30 30 chr5 28422527 28422763 -174662769 - L2 LINE L2 -4 3309 3074 578 326 126 26 chr5 28422796 28423146 -174662386 - L2 LINE L2 -1475 1839 1455 24 0 0 0 chr5 28424395 28424419 -174661113 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 28424686 28424722 -174660810 + AT_rich Low_complexity Low_complexity 1 36 0 31 44 0 0 chr5 28425745 28425790 -174659742 + AT_rich Low_complexity Low_complexity 1 45 0 22 35 0 0 chr5 28426095 28426124 -174659408 + AT_rich Low_complexity Low_complexity 1 29 0 580 129 10 0 chr5 28426124 28426225 -174659307 - L1PA13 LINE L1 0 6814 6713 6314 199 108 3 chr5 28426225 28427300 -174658232 + THE1B-int LTR MaLR 393 1580 0 2138 150 22 19 chr5 28427302 28427663 -174657869 + THE1B LTR MaLR 3 364 0 2871 148 9 0 chr5 28427664 28428116 -174657416 - L1PA13 LINE L1 -213 6599 6144 1567 179 21 3 chr5 28428116 28428401 -174657131 - AluSq SINE Alu -23 290 1 14442 211 33 11 chr5 28428402 28428778 -174656754 - L1PA13 LINE L1 -751 6046 5680 2124 100 4 0 chr5 28428778 28429078 -174656454 - AluY SINE Alu 0 301 1 14442 211 33 11 chr5 28429078 28430395 -174655137 - L1PA13 LINE L1 -1117 5680 4393 255 79 0 0 chr5 28430395 28430433 -174655099 + (TG)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 28430433 28432097 -174653435 - L1PA13 LINE L1 -2404 4393 2614 1751 167 27 13 chr5 28432095 28432818 -174652714 - L1PA13 LINE L1 -4892 1895 1 * 22 0 0 0 chr5 28433160 28433182 -174652350 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 28433239 28433260 -174652272 + AT_rich Low_complexity Low_complexity 1 21 0 228 133 89 0 chr5 28435364 28435409 -174650123 - L2 LINE L2 0 3313 3265 25 0 0 0 chr5 28435421 28435446 -174650086 + AT_rich Low_complexity Low_complexity 1 25 0 276 270 144 0 chr5 28435637 28435748 -174649784 + L1ME LINE L1 5562 5688 -433 192 40 0 0 chr5 28436900 28436925 -174648607 + (CA)n Simple_repeat Simple_repeat 2 26 0 213 222 0 0 chr5 28436925 28436988 -174648544 + (TATG)n Simple_repeat Simple_repeat 2 64 0 313 92 0 46 chr5 28437122 28437139 -174648393 + (TAAAAA)n Simple_repeat Simple_repeat 3 19 -45 6140 10 0 0 chr5 28437139 28437832 -174647700 + L1PA3 LINE L1 5463 6155 0 313 92 0 46 chr5 28437832 28437879 -174647653 + (TAAAAA)n Simple_repeat Simple_repeat 19 64 0 1516 123 58 0 chr5 28438093 28438354 -174647178 + L1MA5A LINE L1 6018 6293 -4 483 325 90 62 chr5 28438519 28439052 -174646480 - ERVL LTR ERVL -4311 1453 906 258 185 0 31 chr5 28439875 28439940 -174645592 + (TTTA)n Simple_repeat Simple_repeat 1 63 0 184 197 13 13 chr5 28440312 28440388 -174645144 + (TA)n Simple_repeat Simple_repeat 2 77 0 22 0 0 0 chr5 28440713 28440735 -174644797 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr5 28440903 28440955 -174644577 + AT_rich Low_complexity Low_complexity 1 52 0 229 122 68 0 chr5 28441214 28441288 -174644244 + (TATAA)n Simple_repeat Simple_repeat 1 79 0 346 189 73 12 chr5 28441304 28441468 -174644064 + (TA)n Simple_repeat Simple_repeat 1 174 0 * 352 228 5 54 chr5 28441399 28441583 -174643949 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 469 155 32 75 chr5 28441500 28441757 -174643775 + (CTATA)n Simple_repeat Simple_repeat 1 246 0 2428 197 22 15 chr5 28441761 28442299 -174643233 + L1MC3 LINE L1 7237 7778 -7 5922 127 88 67 chr5 28444498 28446467 -174639065 + pTR5 LTR ERV1 741 2438 0 5991 72 0 0 chr5 28646689 28647510 -174438022 - L1PA7 LINE L1 -2 6152 5328 216 67 0 0 chr5 28647599 28647629 -174437903 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 255 103 0 0 chr5 28649057 28649096 -174436436 + (CA)n Simple_repeat Simple_repeat 2 40 0 285 169 28 45 chr5 28649384 28649562 -174435970 + CT-rich Low_complexity Low_complexity 5 179 0 301 248 88 29 chr5 28649562 28649699 -174435833 - L1M2 LINE L1 -4028 2821 2677 362 308 178 30 chr5 28649705 28650075 -174435457 - HAL1 LINE L1 -1207 1300 876 404 344 73 9 chr5 28651213 28651431 -174434101 + MIR SINE MIR 21 252 -10 371 323 68 68 chr5 28651511 28651759 -174433773 + LTR33 LTR ERVL 12 259 -262 257 305 12 0 chr5 28651834 28651916 -174433616 + LTR33 LTR ERVL 370 452 -69 442 288 23 0 chr5 28652207 28652339 -174433193 - MLT1H LTR MaLR -4 545 411 587 264 82 30 chr5 28652421 28652656 -174432876 - MLT1H LTR MaLR -261 288 1 590 13 53 0 chr5 28652982 28653058 -174432474 - L1PA4 LINE L1 -2 6153 6074 374 339 63 0 chr5 28653467 28653656 -174431876 + MLT1J2 LTR MaLR 12 212 -238 240 254 0 0 chr5 28653668 28653727 -174431805 + CT-rich Low_complexity Low_complexity 2 60 0 647 282 87 21 chr5 28655418 28655659 -174429873 + MIR SINE MIR 5 261 -1 246 270 67 11 chr5 28655714 28655803 -174429729 + L2 LINE L2 3220 3313 0 338 288 153 23 chr5 28655931 28656108 -174429424 + MIR SINE MIR 41 240 -22 269 185 7 40 chr5 28656872 28657023 -174428509 + (TA)n Simple_repeat Simple_repeat 2 147 0 236 325 60 0 chr5 28657046 28657129 -174428403 - L2 LINE L2 -44 3228 3141 267 393 0 0 chr5 28657677 28657761 -174427771 - L2 LINE L2 -38 3234 3151 6060 173 10 14 chr5 28658042 28660156 -174425376 + L1MA3 LINE L1 4190 6305 0 25 31 0 0 chr5 28660160 28660192 -174425340 + AT_rich Low_complexity Low_complexity 1 32 0 292 109 0 36 chr5 28660284 28660339 -174425193 - L1MA10 LINE L1 -14 6320 6268 1360 217 4 0 chr5 28660339 28660569 -174424963 + MER8 DNA MER2_type 2 232 -7 207 69 0 0 chr5 28661745 28661774 -174423758 + (TG)n Simple_repeat Simple_repeat 1 29 0 225 304 0 0 chr5 28661964 28662043 -174423489 + L1MDa LINE L1 1636 1714 -4826 333 236 158 24 chr5 28662051 28662178 -174423354 - L1MCa LINE L1 -3215 3211 3068 21 36 0 0 chr5 28662290 28662318 -174423214 + AT_rich Low_complexity Low_complexity 1 28 0 600 243 61 43 chr5 28662475 28662936 -174422596 - L1MCa LINE L1 -3667 2759 2250 366 231 40 0 chr5 28662975 28663228 -174422304 + (TA)n Simple_repeat Simple_repeat 1 263 0 328 247 35 0 chr5 28663277 28663362 -174422170 + MLT1B LTR MaLR 256 343 -47 2420 272 66 24 chr5 28663363 28663501 -174422031 + L1M4 LINE L1 3117 3248 -2898 2116 96 3 20 chr5 28663501 28663843 -174421689 + AluSc SINE Alu 1 309 0 2420 272 66 24 chr5 28663843 28663917 -174421615 + L1M4 LINE L1 3248 3317 -2829 1919 203 40 26 chr5 28663917 28664190 -174421342 - MSTB1 LTR MaLR 0 432 149 1531 214 7 0 chr5 28664190 28664484 -174421048 + AluJb SINE Alu 1 296 -16 1919 203 40 26 chr5 28664484 28664633 -174420899 - MSTB1 LTR MaLR -283 149 4 2420 272 66 24 chr5 28664633 28665537 -174419995 + L1M4 LINE L1 3317 4281 -1865 1192 126 16 0 chr5 28665528 28665718 -174419814 + L1P5 LINE L1 5410 5602 -549 * 5758 125 12 3 chr5 28665825 28666720 -174418812 + L1PA10 LINE L1 5262 6164 -4 462 262 90 0 chr5 28667457 28667602 -174417930 - MIR SINE MIR -34 228 71 214 361 92 17 chr5 28668686 28668805 -174416727 + MIR SINE MIR 14 141 -121 400 252 8 53 chr5 28668908 28669039 -174416493 + MIR SINE MIR 135 259 -3 23 86 0 0 chr5 28669700 28669758 -174415774 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr5 28670290 28670312 -174415220 + AT_rich Low_complexity Low_complexity 1 22 0 2375 75 7 0 chr5 28670768 28671075 -174414457 - AluY SINE Alu -2 309 1 436 272 40 8 chr5 28674116 28674241 -174411291 + L2 LINE L2 3185 3313 0 1373 243 65 29 chr5 28674619 28675067 -174410465 + MLT1C LTR MaLR 4 467 0 23 33 0 0 chr5 28675082 28675112 -174410420 + AT_rich Low_complexity Low_complexity 1 30 0 1903 161 77 48 chr5 28675236 28675652 -174409880 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 28675684 28675706 -174409826 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 28676287 28676329 -174409203 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 303 326 65 22 chr5 28677083 28677221 -174408311 + MIR SINE MIR 28 171 -91 1429 108 58 0 chr5 28677223 28677464 -174408068 + L1MA6 LINE L1 6040 6294 -6 454 239 181 32 chr5 28677930 28678085 -174407447 - MER5A DNA MER1_type 0 189 12 1579 162 54 40 chr5 28678423 28678793 -174406739 + THE1C LTR MaLR 1 375 0 1820 152 0 0 chr5 28678858 28679141 -174406391 - AluSq SINE Alu -30 283 1 380 111 0 0 chr5 28679165 28679219 -174406313 + MSTB LTR MaLR 2 55 -371 433 159 0 0 chr5 28679219 28679288 -174406244 - L1P LINE L1 -1152 4994 4926 * 1496 123 36 12 chr5 28679285 28679536 -174405996 + L1PA13 LINE L1 5887 6143 -20 1589 201 64 3 chr5 28679572 28679886 -174405646 + MSTB LTR MaLR 94 426 0 437 162 57 57 chr5 28679943 28680048 -174405484 - MLT1D LTR MaLR 0 505 401 279 0 0 0 chr5 28680190 28680221 -174405311 + (TG)n Simple_repeat Simple_repeat 2 32 0 2573 55 0 0 chr5 28681753 28682061 -174403471 - AluY SINE Alu -2 309 2 1811 146 71 31 chr5 28682572 28682895 -174402637 + MER1B DNA MER1_type 2 337 0 27 29 0 0 chr5 28683468 28683502 -174402030 + AT_rich Low_complexity Low_complexity 1 34 0 1771 295 36 14 chr5 28683536 28684037 -174401495 + MLT1F LTR MaLR 29 540 -2 205 248 18 0 chr5 28684246 28684359 -174401173 + (TA)n Simple_repeat Simple_repeat 1 115 0 222 128 0 0 chr5 28685480 28685519 -174400013 + (TG)n Simple_repeat Simple_repeat 2 40 0 242 384 18 0 chr5 28686726 28686838 -174398694 + MER81 DNA DNA 1 114 0 1468 256 39 18 chr5 28686902 28687390 -174398142 + MLT1D LTR MaLR 4 501 -4 2200 39 0 0 chr5 28687836 28688094 -174397438 + AluY SINE Alu 43 300 -11 685 228 57 24 chr5 28688949 28689160 -174396372 - MER39 LTR ERV1 -41 666 449 222 37 0 0 chr5 28689299 28689326 -174396206 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 814 149 0 0 chr5 28689326 28689440 -174396092 - AluJb SINE Alu -192 120 7 25 31 0 0 chr5 28690014 28690046 -174395486 + AT_rich Low_complexity Low_complexity 1 32 0 1288 170 140 8 chr5 28691030 28691295 -174394237 + AluJb SINE Alu 1 300 -2 247 301 166 5 chr5 28691330 28691523 -174394009 + MER46C DNA MER2_type 94 317 -21 250 340 60 10 chr5 28691679 28691779 -174393753 - MIR SINE MIR -81 181 77 1736 199 17 11 chr5 28692698 28693060 -174392472 - MLT1A1 LTR MaLR 0 365 2 1574 167 0 99 chr5 28693252 28693635 -174391897 - MER7A DNA MER2_type 0 346 4 356 167 26 13 chr5 28693657 28693735 -174391797 + MER67C LTR ERV1 595 673 -37 1156 144 18 52 chr5 28694312 28694541 -174390991 - Tigger2a DNA MER2_type -212 222 2 801 63 9 0 chr5 28694695 28694806 -174390726 + LTR22A LTR ERVK 1 112 -346 655 159 16 16 chr5 28694807 28694933 -174390599 - HERVK22 LTR ERVK -6631 206 81 3280 88 11 4 chr5 28694997 28695451 -174390081 - LTR22A LTR ERVK -1 457 1 219 261 0 0 chr5 28695586 28695632 -174389900 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 323 313 35 55 chr5 28696200 28696401 -174389131 - MIR3 SINE MIR 0 208 12 2042 115 4 4 chr5 28696472 28696780 -174388752 - AluSx SINE Alu 0 312 5 1032 225 0 0 chr5 28697072 28697285 -174388247 - L1PB4 LINE L1 -3 6153 5941 422 330 63 42 chr5 28697690 28697975 -174387557 - L2 LINE L2 -2 3311 3021 21 0 0 0 chr5 28698245 28698266 -174387266 + AT_rich Low_complexity Low_complexity 1 21 0 237 349 69 39 chr5 28698410 28698742 -174386790 - L2 LINE L2 -707 2607 2266 2568 53 0 0 chr5 28698745 28699049 -174386483 - AluY SINE Alu -7 304 1 186 373 45 0 chr5 28699681 28699748 -174385784 - L2 LINE L2 -50 3222 3153 588 314 106 16 chr5 28699944 28700247 -174385285 + L2 LINE L2 1299 1628 -1686 183 100 0 0 chr5 28700247 28700277 -174385255 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 1964 61 389 162 chr5 28700278 28700852 -174384680 + LTR12 LTR ERV1 8 711 -3 207 100 0 0 chr5 28700854 28700884 -174384648 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2046 127 7 3 chr5 28700885 28701184 -174384348 - AluSg SINE Alu -8 302 3 485 333 102 19 chr5 28701218 28701533 -174383999 + L2 LINE L2 1642 1982 -1332 495 313 142 16 chr5 28701534 28701850 -174383682 + L2 LINE L2 2185 2540 -774 261 0 0 0 chr5 28701853 28701882 -174383650 + (T)n Simple_repeat Simple_repeat 1 29 0 635 270 11 16 chr5 28702028 28702217 -174383315 - MLT1A2 LTR MaLR 0 374 187 315 0 0 0 chr5 28702220 28702255 -174383277 + (TG)n Simple_repeat Simple_repeat 2 36 0 860 199 42 0 chr5 28702264 28702430 -174383102 - MSTB LTR MaLR -15 411 239 242 220 0 0 chr5 28702436 28702486 -174383046 - MSTB-int LTR MaLR -188 1463 1414 1846 145 49 20 chr5 28702486 28702830 -174382702 + L1PB3 LINE L1 5799 6152 -2 6562 218 46 10 chr5 28702884 28704247 -174381285 - MSTB-int LTR MaLR -234 1417 6 1847 237 21 5 chr5 28704258 28704676 -174380856 - MSTB LTR MaLR 0 426 2 228 122 0 0 chr5 28704676 28704717 -174380815 + (TC)n Simple_repeat Simple_repeat 2 42 0 564 236 7 42 chr5 28704798 28704942 -174380590 - MLT1A2 LTR MaLR -226 139 1 190 333 39 13 chr5 28705060 28705138 -174380394 - L2 LINE L2 -12 3301 3222 198 0 0 0 chr5 28705776 28705798 -174379734 + (T)n Simple_repeat Simple_repeat 1 22 0 221 187 55 22 chr5 28706395 28706486 -174379046 + (TA)n Simple_repeat Simple_repeat 2 95 0 2309 144 38 10 chr5 28707964 28708381 -174377151 + L1PB2 LINE L1 5721 6149 -2 2847 213 92 17 chr5 28708388 28708980 -174376552 + L1MC2 LINE L1 4309 4855 -1489 240 35 0 0 chr5 28708980 28709009 -174376523 + (CA)n Simple_repeat Simple_repeat 1 29 0 2847 213 92 17 chr5 28709009 28710299 -174375233 + L1MC2 LINE L1 4855 6335 -9 750 306 128 18 chr5 28710463 28711034 -174374498 + L1ME2 LINE L1 5316 5949 -215 228 111 0 0 chr5 28711572 28711608 -174373924 + (TA)n Simple_repeat Simple_repeat 1 36 0 1757 135 6 45 chr5 28712000 28712311 -174373221 + AluSx SINE Alu 1 299 -13 225 185 0 74 chr5 28713123 28713177 -174372355 + L2 LINE L2 3264 3313 0 1239 131 78 45 chr5 28713909 28714153 -174371379 - MSTC LTR MaLR -12 416 165 2538 101 14 8 chr5 28714156 28714514 -174371018 - THE1C LTR MaLR -15 360 1 785 193 33 0 chr5 28714514 28714660 -174370872 - MSTC LTR MaLR -277 151 1 2191 102 3 3 chr5 28715367 28715662 -174369870 + AluSp SINE Alu 5 299 -14 197 337 41 0 chr5 28715950 28716048 -174369484 + MIR SINE MIR 148 249 -13 21 71 0 0 chr5 28716376 28716418 -174369114 + AT_rich Low_complexity Low_complexity 1 42 0 1573 164 18 11 chr5 28716517 28716820 -174368712 + AluJo SINE Alu 16 312 0 30 45 0 0 chr5 28722735 28722779 -174362753 + AT_rich Low_complexity Low_complexity 1 44 0 2181 110 3 3 chr5 28723151 28723451 -174362081 + AluSg SINE Alu 7 306 -4 930 85 0 248 chr5 28724034 28724079 -174361453 + MSTC LTR MaLR 1 55 -373 495 0 0 0 chr5 28724079 28724134 -174361398 + (TTTTA)n Simple_repeat Simple_repeat 5 59 0 1771 107 69 4 chr5 28724134 28724396 -174361136 - AluSq SINE Alu -32 281 3 930 85 0 248 chr5 28724396 28724472 -174361060 + MSTC LTR MaLR 54 12 -416 2257 70 0 64 chr5 28724472 28724801 -174360731 + AluY SINE Alu 4 311 0 930 85 0 248 chr5 28724801 28724971 -174360561 + MSTC LTR MaLR 11 221 -207 189 0 0 0 chr5 28725038 28725059 -174360473 + (A)n Simple_repeat Simple_repeat 1 21 0 465 303 263 19 chr5 28725576 28726062 -174359470 + L2 LINE L2 2152 2756 -558 207 379 30 23 chr5 28726126 28726258 -174359274 + L2 LINE L2 2768 2900 -414 2432 63 0 0 chr5 28726521 28726820 -174358712 - AluY SINE Alu -12 299 1 302 122 51 31 chr5 28726998 28727096 -174358436 + (TA)n Simple_repeat Simple_repeat 2 101 0 25 0 0 0 chr5 28727643 28727668 -174357864 + AT_rich Low_complexity Low_complexity 1 25 0 532 338 101 0 chr5 28730403 28730631 -174354901 + MIR SINE MIR 6 256 -6 1646 218 48 10 chr5 28730949 28731344 -174354188 - LTR52 LTR ERVL -9 412 3 29 47 0 0 chr5 28731681 28731724 -174353808 + AT_rich Low_complexity Low_complexity 1 43 0 535 261 62 29 chr5 28732733 28732974 -174352558 + HAL1 LINE L1 1778 2026 -481 21 0 0 0 chr5 28733023 28733044 -174352488 + AT_rich Low_complexity Low_complexity 1 21 0 2091 131 26 0 chr5 28733452 28733757 -174351775 - AluSq SINE Alu 0 313 1 1602 156 7 41 chr5 28734362 28734692 -174350840 - AluJo SINE Alu 0 320 1 1559 336 84 37 chr5 28734777 28736059 -174349473 - L2 LINE L2 -7 3306 1978 215 260 10 21 chr5 28736330 28736426 -174349106 + (TTTAA)n Simple_repeat Simple_repeat 3 97 0 203 282 107 61 chr5 28737754 28737885 -174347647 - L3 LINE CR1 -227 1350 1214 22 0 0 0 chr5 28738024 28738046 -174347486 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 28738295 28738329 -174347203 + AT_rich Low_complexity Low_complexity 1 34 0 28 79 0 0 chr5 28738591 28738654 -174346878 + AT_rich Low_complexity Low_complexity 1 63 0 285 250 25 0 chr5 28740047 28740127 -174345405 + (TA)n Simple_repeat Simple_repeat 2 83 0 181 327 60 60 chr5 28740281 28740431 -174345101 + L2 LINE L2 3016 3165 -107 486 0 0 0 chr5 28741032 28741086 -174344446 + (TA)n Simple_repeat Simple_repeat 1 54 0 27 0 0 0 chr5 28741211 28741238 -174344294 + AT_rich Low_complexity Low_complexity 1 27 0 528 244 159 20 chr5 28741400 28741601 -174343931 + Charlie4 DNA MER1_type 3 231 -1730 242 282 51 8 chr5 28741693 28741810 -174343722 + Charlie4 DNA MER1_type 1840 1961 0 21 57 0 0 chr5 28742950 28742985 -174342547 + AT_rich Low_complexity Low_complexity 1 35 0 233 316 238 6 chr5 28743164 28743332 -174342200 + MIR SINE MIR 28 234 -28 198 0 0 0 chr5 28744084 28744106 -174341426 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 39 22 0 0 chr5 28744519 28744565 -174340967 + AT_rich Low_complexity Low_complexity 1 46 0 42 48 0 0 chr5 28745440 28745503 -174340029 + AT_rich Low_complexity Low_complexity 1 63 0 338 327 138 52 chr5 28745508 28745587 -174339945 + L1MC4a LINE L1 5264 5335 -2473 1707 231 26 22 chr5 28745587 28746050 -174339482 + MLT1C LTR MaLR 3 467 0 338 327 138 52 chr5 28746050 28746508 -174339024 + L1MC4a LINE L1 5335 5847 -1961 749 238 40 113 chr5 28746640 28747040 -174338492 - MLT1A2 LTR MaLR 0 374 4 1535 260 58 64 chr5 28749191 28749389 -174336143 + MLT1E2 LTR MaLR 1 199 -427 2221 88 5 0 chr5 28749389 28749693 -174335839 + AluSx SINE Alu 3 284 -28 1535 260 58 64 chr5 28749693 28750129 -174335403 + MLT1E2 LTR MaLR 199 626 0 459 294 157 0 chr5 28750272 28750425 -174335107 - MER5A DNA MER1_type -1 188 12 2297 80 0 10 chr5 28750721 28751023 -174334509 - AluY SINE Alu -12 299 1 239 0 0 31 chr5 28751671 28751703 -174333829 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 16706 103 42 75 chr5 28754656 28757961 -174327571 + L1PA8 LINE L1 2895 6170 -2 948 279 64 29 chr5 28757961 28758509 -174327023 + L1M4 LINE L1 3168 3734 -2412 395 309 86 0 chr5 28760179 28760318 -174325214 + MIR SINE MIR 18 168 -94 21 57 0 0 chr5 28762280 28762315 -174323217 + AT_rich Low_complexity Low_complexity 1 35 0 222 218 69 92 chr5 28762538 28762625 -174322907 - MIR SINE MIR -10 252 168 310 316 155 26 chr5 28762754 28762909 -174322623 + MIR SINE MIR 12 186 -76 183 333 0 25 chr5 28763611 28763692 -174321840 - MIR SINE MIR -169 93 15 21 57 0 0 chr5 28764713 28764748 -174320784 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 28765360 28765381 -174320151 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 28765642 28765680 -174319852 + AT_rich Low_complexity Low_complexity 1 38 0 2319 58 7 7 chr5 28767065 28767360 -174318172 - AluY SINE Alu -16 295 1 35 78 0 0 chr5 28767446 28767523 -174318009 + AT_rich Low_complexity Low_complexity 1 77 0 1038 8 0 0 chr5 28767614 28767733 -174317799 - L1PA2 LINE L1 -1 6154 6036 25 0 0 0 chr5 28768015 28768040 -174317492 + AT_rich Low_complexity Low_complexity 1 25 0 407 19 19 0 chr5 28768290 28768342 -174317190 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 267 393 0 0 chr5 28769111 28769195 -174316337 + L2 LINE L2 3151 3234 -38 230 345 11 0 chr5 28769201 28769288 -174316244 - MIR SINE MIR -2 260 173 195 170 0 0 chr5 28770574 28770621 -174314911 + (TA)n Simple_repeat Simple_repeat 2 48 0 1982 134 36 38 chr5 28770843 28771208 -174314324 + THE1B LTR MaLR 1 364 0 209 254 28 42 chr5 28771259 28771330 -174314202 + MIR3 SINE MIR 91 160 -48 21 36 0 0 chr5 28771356 28771384 -174314148 + AT_rich Low_complexity Low_complexity 1 28 0 324 0 0 0 chr5 28771834 28771870 -174313662 + (TG)n Simple_repeat Simple_repeat 1 36 0 233 356 45 60 chr5 28773120 28773302 -174312230 + MIR SINE MIR 2 191 -54 1319 153 142 24 chr5 28773483 28773737 -174311795 + THE1B LTR MaLR 81 364 0 354 167 15 0 chr5 28773887 28773953 -174311579 + MSTD LTR MaLR 2 68 -360 575 286 6 40 chr5 28773985 28774160 -174311372 + MSTD LTR MaLR 227 395 -1 27 73 0 0 chr5 28774379 28774434 -174311098 + AT_rich Low_complexity Low_complexity 1 55 0 2103 103 10 0 chr5 28774704 28774994 -174310538 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr5 28775924 28775948 -174309584 + AT_rich Low_complexity Low_complexity 1 24 0 3301 213 23 26 chr5 28776172 28777272 -174308260 + L1MB5 LINE L1 4979 6076 -98 1494 152 110 26 chr5 28778500 28778809 -174306723 - MER44D DNA MER2_type -4 605 1 606 129 34 48 chr5 28779226 28779373 -174306159 - L1MA7 LINE L1 -8 6283 6139 536 224 37 0 chr5 28779392 28779526 -174306006 + L1MA7 LINE L1 6005 6143 -148 208 385 73 6 chr5 28779754 28779933 -174305599 + L2 LINE L2 2522 2712 -602 24 77 0 0 chr5 28780079 28780131 -174305401 + AT_rich Low_complexity Low_complexity 1 52 0 193 333 231 6 chr5 28780390 28780546 -174304986 + L2 LINE L2 3031 3221 -92 1099 260 123 31 chr5 28780677 28781058 -174304474 + MLT2B1 LTR ERVL 103 518 -2 16938 156 47 56 chr5 28781103 28783192 -174302340 + L1M1 LINE L1 16 2202 -5363 2970 168 33 9 chr5 28783192 28783764 -174301768 + LTR60 LTR ERV1 1 586 0 16938 156 47 56 chr5 28783764 28785182 -174300350 + L1M1 LINE L1 2202 3632 -3933 3785 233 39 22 chr5 28785216 28786372 -174299160 + L1M1 LINE L1 3608 4782 -2783 295 121 38 17 chr5 28786474 28786551 -174298981 - L1PA8 LINE L1 -188 5966 5884 1919 146 0 0 chr5 28786939 28787250 -174298282 + AluSx SINE Alu 1 311 0 265 321 57 0 chr5 28787793 28787899 -174297633 + LTR16A1 LTR ERVL 174 285 -172 1516 198 29 0 chr5 28788592 28788747 -174296785 - AluJb SINE Alu -26 286 118 221 0 0 33 chr5 28788747 28788777 -174296755 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1516 198 29 0 chr5 28788777 28788899 -174296633 - AluJb SINE Alu -194 118 1 301 322 11 11 chr5 28789205 28789292 -174296240 - L2 LINE L2 -36 3277 3191 1562 183 0 41 chr5 28789354 28789649 -174295883 - AluJo SINE Alu -20 292 10 2036 118 0 0 chr5 28789929 28790208 -174295324 - AluSx SINE Alu -10 302 24 243 309 11 0 chr5 28791009 28791103 -174294429 - L1MC/D LINE L1 -2339 5469 5375 254 125 21 0 chr5 28791556 28791604 -174293928 + (TA)n Simple_repeat Simple_repeat 2 50 0 207 218 69 20 chr5 28791724 28791825 -174293707 + (TTAAA)n Simple_repeat Simple_repeat 5 110 0 851 216 54 62 chr5 28794055 28794296 -174291236 + MER8 DNA MER2_type 1 239 0 2319 89 0 0 chr5 28794512 28794803 -174290729 - AluSg SINE Alu -14 296 6 1930 151 10 10 chr5 28795609 28795920 -174289612 + AluSx SINE Alu 1 311 -1 1571 137 64 6 chr5 28796312 28796461 -174289071 - L1MA9 LINE L1 0 6312 6173 222 37 0 0 chr5 28796461 28796488 -174289044 + (TG)n Simple_repeat Simple_repeat 2 28 0 1571 137 64 6 chr5 28796488 28796651 -174288881 - L1MA9 LINE L1 -139 6173 5982 362 367 29 61 chr5 28797447 28797793 -174287739 + L1ME LINE L1 332 666 -5539 235 353 26 0 chr5 28797894 28798010 -174287522 + L1MC4 LINE L1 7907 8025 -17 1302 165 34 8 chr5 28798088 28798324 -174287208 - AluJb SINE Alu -8 304 63 299 186 43 0 chr5 28798396 28798466 -174287066 - L1MC/D LINE L1 -764 5400 5328 329 295 20 58 chr5 28798587 28798882 -174286650 - L1MC4 LINE L1 -169 7873 7590 293 309 66 7 chr5 28798884 28799036 -174286496 + L1M4 LINE L1 4622 4782 -1364 234 220 0 0 chr5 28799096 28799155 -174286377 + (TA)n Simple_repeat Simple_repeat 2 60 0 1828 296 68 40 chr5 28799579 28801747 -174283785 + L1ME LINE L1 591 2791 -3424 190 382 66 0 chr5 28802511 28802587 -174282945 + L2 LINE L2 3169 3249 -23 243 313 30 30 chr5 28802704 28802835 -174282697 + L1ME LINE L1 5602 5732 -458 1895 174 3 9 chr5 28802846 28803191 -174282341 + MER2 DNA MER2_type 2 344 0 24 32 0 0 chr5 28803295 28803326 -174282206 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 28803589 28803610 -174281922 + (CAT)n Simple_repeat Simple_repeat 1 21 0 201 121 0 0 chr5 28803758 28803791 -174281741 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1938 118 20 13 chr5 28804323 28804629 -174280903 - AluSg SINE Alu 0 310 3 180 0 0 0 chr5 28804746 28804766 -174280766 + (CAA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 28807112 28807133 -174278399 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr5 28808734 28808766 -174276766 + (T)n Simple_repeat Simple_repeat 1 32 0 410 101 14 0 chr5 28811137 28811206 -174274326 + (TC)n Simple_repeat Simple_repeat 1 70 0 279 355 0 0 chr5 28811600 28811693 -174273839 - MIR SINE MIR -121 141 49 258 160 0 0 chr5 28811774 28811824 -174273708 + (CAT)n Simple_repeat Simple_repeat 1 50 0 411 294 123 42 chr5 28812565 28812874 -174272658 - L2 LINE L2 -439 2875 2542 381 325 58 31 chr5 28813103 28813294 -174272238 + LTR16A1 LTR ERVL 258 453 -4 310 276 11 0 chr5 28813615 28813702 -174271830 + (TA)n Simple_repeat Simple_repeat 2 89 0 1386 182 0 0 chr5 28813702 28813933 -174271599 - MER1B DNA MER1_type -66 231 1 1414 201 33 16 chr5 28813933 28814237 -174271295 + MLT1A1 LTR MaLR 55 363 -2 2833 228 25 32 chr5 28814237 28814460 -174271072 + MLT1A1-int LTR MaLR 5 228 -1143 2244 88 3 16 chr5 28814460 28814765 -174270767 + AluSp SINE Alu 1 301 -12 2833 228 25 32 chr5 28814765 28815280 -174270252 + MLT1A1-int LTR MaLR 228 752 -619 222 37 0 0 chr5 28815344 28815371 -174270161 + (A)n Simple_repeat Simple_repeat 1 27 0 2045 236 36 25 chr5 28815496 28815971 -174269561 + MLT1A1-int LTR MaLR 1255 1734 -1 1247 237 12 96 chr5 28815975 28816174 -174269358 + MLT1A2 LTR MaLR 4 153 -221 302 0 26 0 chr5 28816174 28816212 -174269320 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1247 237 12 96 chr5 28816212 28816417 -174269115 + MLT1A2 LTR MaLR 153 374 0 25 31 0 0 chr5 28817967 28817999 -174267533 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 28818261 28818290 -174267242 + AT_rich Low_complexity Low_complexity 1 29 0 205 226 19 0 chr5 28818295 28818348 -174267184 + (TA)n Simple_repeat Simple_repeat 1 54 0 246 156 0 0 chr5 28818371 28818435 -174267097 + (TA)n Simple_repeat Simple_repeat 2 65 0 195 235 0 0 chr5 28818895 28818946 -174266586 + (TG)n Simple_repeat Simple_repeat 2 52 0 2112 118 3 0 chr5 28819352 28819640 -174265892 - AluSc SINE Alu -17 292 4 442 100 0 0 chr5 28819870 28819930 -174265602 - L1P LINE L1 -900 5246 5187 3694 43 2 4 chr5 28819930 28820389 -174265143 + L1PA4 LINE L1 5695 6155 0 21 36 0 0 chr5 28820535 28820563 -174264969 + AT_rich Low_complexity Low_complexity 1 28 0 2154 113 20 0 chr5 28820610 28820911 -174264621 + AluSc SINE Alu 1 307 -2 184 270 226 0 chr5 28820994 28821109 -174264423 - L2 LINE L2 -62 3251 3111 1058 233 10 24 chr5 28821113 28821409 -174264123 + L1MC3 LINE L1 4728 5019 -1127 295 259 12 0 chr5 28821520 28821605 -174263927 + L1MC3 LINE L1 5026 5111 -1035 8578 204 41 78 chr5 28821612 28823490 -174262042 + L1MC3 LINE L1 5069 7014 -771 297 0 0 0 chr5 28823490 28823523 -174262009 + (TC)n Simple_repeat Simple_repeat 1 33 0 8578 204 41 78 chr5 28823523 28823631 -174261901 + L1MC3 LINE L1 7014 7124 -661 7249 45 3 0 chr5 28823631 28824577 -174260955 + L1PA5 LINE L1 5206 6154 0 8578 204 41 78 chr5 28824577 28824653 -174260879 + L1MC3 LINE L1 7124 7201 -584 1137 217 4 0 chr5 28824653 28824888 -174260644 - MER46A DNA MER2_type 0 236 1 8578 204 41 78 chr5 28824888 28825241 -174260291 + L1MC3 LINE L1 7201 7366 -419 208 0 62 0 chr5 28825241 28825273 -174260259 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8578 204 41 78 chr5 28825273 28825658 -174259874 + L1MC3 LINE L1 7366 7764 -21 293 327 65 93 chr5 28825670 28826207 -174259325 - L2 LINE L2 -188 3125 2606 417 264 37 117 chr5 28826243 28826569 -174258963 - L2 LINE L2 -830 2484 2185 5472 129 4 3 chr5 28826920 28827824 -174257708 + L1PA14 LINE L1 5047 6152 -9 30 0 0 0 chr5 28827824 28827854 -174257678 + AT_rich Low_complexity Low_complexity 1 30 0 737 318 135 21 chr5 28827938 28828375 -174257157 + LTR33 LTR ERVL 31 517 -4 193 255 245 10 chr5 28828459 28828557 -174256975 - L2 LINE L2 -2 3311 3191 931 253 145 22 chr5 28829174 28829589 -174255943 - Charlie4a DNA MER1_type -7 501 36 1808 154 21 0 chr5 28829861 28830146 -174255386 + AluSx SINE Alu 3 293 -19 311 305 91 19 chr5 28830548 28830702 -174254830 - MLT1I LTR MaLR -236 173 9 1085 191 23 27 chr5 28831719 28831975 -174253557 - L1MB1 LINE L1 -18 6150 5896 587 312 67 40 chr5 28832457 28832829 -174252703 - MLT1I LTR MaLR -22 387 6 1303 219 113 24 chr5 28832854 28833279 -174252253 + MLT1C LTR MaLR 3 465 -2 328 206 15 145 chr5 28833453 28833584 -174251948 + MIR SINE MIR 64 177 -85 703 293 10 0 chr5 28833692 28833900 -174251632 + MER2 DNA MER2_type 1 210 -135 25 0 0 0 chr5 28833924 28833949 -174251583 + AT_rich Low_complexity Low_complexity 1 25 0 223 216 137 0 chr5 28834635 28834686 -174250846 - MIR SINE MIR -4 258 201 1283 208 67 31 chr5 28834706 28835066 -174250466 + MER93b LTR ERV1 1 373 0 425 305 123 48 chr5 28835070 28835404 -174250128 + MLT1I LTR MaLR 18 376 -33 692 283 178 28 chr5 28835616 28836083 -174249449 + MER90 LTR ERV1 78 614 0 257 221 0 35 chr5 28836245 28836331 -174249201 + (TA)n Simple_repeat Simple_repeat 1 83 0 21 0 0 0 chr5 28836525 28836546 -174248986 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 28837259 28837288 -174248244 + AT_rich Low_complexity Low_complexity 1 29 0 288 306 64 31 chr5 28838976 28839216 -174246316 + MER20B DNA MER1_type 2 270 -513 205 171 0 0 chr5 28839220 28839261 -174246271 + T-rich Low_complexity Low_complexity 4 44 0 273 299 78 59 chr5 28839316 28839520 -174246012 + MER20B DNA MER1_type 309 516 -267 203 254 0 0 chr5 28839954 28840009 -174245523 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 25 31 0 0 chr5 28841701 28841733 -174243799 + AT_rich Low_complexity Low_complexity 1 32 0 30 27 0 0 chr5 28841842 28841879 -174243653 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 28842234 28842262 -174243270 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr5 28842365 28842392 -174243140 + (CA)n Simple_repeat Simple_repeat 1 27 0 279 317 12 0 chr5 28844679 28844761 -174240771 - MIR3 SINE MIR -25 183 101 1987 130 0 0 chr5 28845414 28845734 -174239798 + AluSx SINE Alu 1 320 0 195 318 229 18 chr5 28846271 28846441 -174239091 - MIR SINE MIR -49 213 8 416 365 131 9 chr5 28847992 28848329 -174237203 + L2 LINE L2 2929 3306 -7 30 59 0 0 chr5 28848340 28848391 -174237141 + AT_rich Low_complexity Low_complexity 1 51 0 322 387 7 0 chr5 28849134 28849284 -174236248 - MIR SINE MIR -79 183 33 190 323 50 30 chr5 28849346 28849445 -174236087 - MIR SINE MIR -65 143 43 1861 155 7 3 chr5 28849741 28850037 -174235495 + AluSx SINE Alu 1 297 -15 205 296 87 56 chr5 28850969 28851165 -174234367 + L3 LINE CR1 1184 1385 -192 196 306 41 0 chr5 28851223 28851272 -174234260 + L2 LINE L2 3242 3292 -21 24 32 0 0 chr5 28853889 28853920 -174231612 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 28854022 28854054 -174231478 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 28854535 28854557 -174230975 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 28854914 28854942 -174230590 + AT_rich Low_complexity Low_complexity 1 28 0 324 70 0 0 chr5 28855110 28855153 -174230379 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr5 28855822 28855843 -174229689 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 28856189 28856213 -174229319 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr5 28856225 28856248 -174229284 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 28856602 28856630 -174228902 + AT_rich Low_complexity Low_complexity 1 28 0 363 72 29 14 chr5 28856667 28856736 -174228796 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 213 39 0 0 chr5 28856811 28856837 -174228695 + (TA)n Simple_repeat Simple_repeat 2 27 0 489 47 0 0 chr5 28857320 28857384 -174228148 + (TG)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr5 28857694 28857715 -174227817 + AT_rich Low_complexity Low_complexity 1 21 0 575 317 65 93 chr5 28863181 28863764 -174221768 + L2 LINE L2 240 806 -2508 22 0 0 0 chr5 28864369 28864391 -174221141 + AT_rich Low_complexity Low_complexity 1 22 0 189 147 0 0 chr5 28864949 28864983 -174220549 + (TAA)n Simple_repeat Simple_repeat 1 34 0 342 356 113 9 chr5 28864990 28865212 -174220320 - MIR SINE MIR -13 249 5 26 30 0 0 chr5 28865767 28865800 -174219732 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr5 28866455 28866487 -174219045 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 28866625 28866647 -174218885 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 28867268 28867289 -174218243 + AT_rich Low_complexity Low_complexity 1 21 0 2281 39 0 1 chr5 28868436 28868743 -174216789 - L1M LINE L1 -758 5388 5101 5268 8 0 0 chr5 28868743 28869335 -174216197 + L1PA2 LINE L1 5561 6152 -3 303 99 28 14 chr5 28869970 28870041 -174215491 + (TA)n Simple_repeat Simple_repeat 2 73 0 263 316 76 80 chr5 28870748 28870998 -174214534 + L2 LINE L2 3004 3252 -20 300 260 58 31 chr5 28871417 28871572 -174213960 - MIR SINE MIR -57 151 37 298 290 61 30 chr5 28871775 28871906 -174213626 + MIR SINE MIR 68 202 -60 23 0 0 0 chr5 28872562 28872585 -174212947 + AT_rich Low_complexity Low_complexity 1 23 0 554 278 138 60 chr5 28872622 28873732 -174211800 - L1MEc LINE L1 -4098 2298 1102 222 224 15 60 chr5 28875347 28875414 -174210118 + MER5B DNA MER1_type 4 67 -111 2283 98 0 0 chr5 28875701 28875998 -174209534 - AluY SINE Alu -14 297 1 2231 95 0 3 chr5 28876004 28876298 -174209234 - AluSx SINE Alu -15 297 5 208 216 0 0 chr5 28876347 28876384 -174209148 + polypyrimidine Low_complexity Low_complexity 1 37 0 2498 133 38 12 chr5 28876772 28877193 -174208339 + MSTB1 LTR MaLR 1 432 0 211 200 22 0 chr5 28878872 28878917 -174206615 + CT-rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr5 28879115 28879143 -174206389 + AT_rich Low_complexity Low_complexity 1 28 0 767 338 63 43 chr5 28879495 28879892 -174205640 - LTR16C LTR ERVL 0 491 87 627 301 66 8 chr5 28880006 28880262 -174205270 + ERVL-E LTR ERVL 2876 3146 -2618 1422 285 96 91 chr5 28880262 28881797 -174203735 + ERVL-E LTR ERVL 4219 5761 -3 317 328 25 17 chr5 28881870 28881989 -174203543 + MLT2E LTR ERVL 34 153 -475 307 341 97 63 chr5 28883367 28883792 -174201740 + L2 LINE L2 2834 3272 0 707 347 51 13 chr5 28883954 28884329 -174201203 + LTR16B LTR ERVL 76 464 0 907 332 60 54 chr5 28884606 28884978 -174200554 + ERVL LTR ERVL 299 678 -4318 2557 40 0 10 chr5 28884978 28885282 -174200250 + AluY SINE Alu 1 301 -10 907 332 60 54 chr5 28885282 28885598 -174199934 + ERVL LTR ERVL 678 991 -4005 461 280 145 91 chr5 28885603 28885975 -174199557 + ERVL LTR ERVL 3986 4549 -619 431 222 0 0 chr5 28886188 28886278 -174199254 - Charlie5 DNA MER1_type -2522 90 1 24 32 0 0 chr5 28886455 28886486 -174199046 + AT_rich Low_complexity Low_complexity 1 31 0 218 390 0 0 chr5 28886692 28886774 -174198758 + MIR SINE MIR 73 154 -108 24 53 0 0 chr5 28888591 28888629 -174196903 + AT_rich Low_complexity Low_complexity 1 38 0 215 383 11 0 chr5 28888654 28888748 -174196784 - L2 LINE L2 0 3272 3178 2297 236 10 19 chr5 28888783 28889303 -174196229 + MLT2B2 LTR ERVL 1 515 0 638 238 17 65 chr5 28889353 28889550 -174195982 + MER58A DNA MER1_type 1 187 -2233 2206 118 0 0 chr5 28889550 28889856 -174195676 - AluSc SINE Alu -3 306 1 638 238 17 65 chr5 28889856 28889889 -174195643 + MER58A DNA MER1_type 187 220 -4 44 63 0 0 chr5 28890024 28890103 -174195429 + AT_rich Low_complexity Low_complexity 1 79 0 232 143 88 0 chr5 28890182 28890273 -174195259 + (TA)n Simple_repeat Simple_repeat 2 100 0 196 344 31 21 chr5 28890748 28890844 -174194688 - MIR SINE MIR -70 192 96 557 298 22 6 chr5 28892449 28892630 -174192902 - MIR SINE MIR -68 194 11 259 357 71 0 chr5 28892752 28892850 -174192682 - L2 LINE L2 -5 3308 3204 280 322 41 0 chr5 28893682 28893803 -174191729 + MLT1J2 LTR MaLR 59 184 -266 15674 194 57 7 chr5 28893955 28900178 -174185354 + L1PA14 LINE L1 61 6883 -716 2431 97 3 43 chr5 28900178 28900224 -174185308 - THE1A LTR MaLR 0 355 309 2388 82 0 3 chr5 28900224 28900528 -174185004 + AluY SINE Alu 1 303 -8 2431 97 3 43 chr5 28900528 28900851 -174184681 - THE1A LTR MaLR -46 309 1 3741 101 8 0 chr5 28900851 28901365 -174184167 - THE1A-int LTR MaLR 0 1580 1063 1124 175 13 0 chr5 28901355 28901584 -174183948 + L1P LINE L1 5058 5289 -857 * 7608 99 14 2 chr5 28901591 28902639 -174182893 - THE1A-int LTR MaLR -519 1061 1 2334 116 29 0 chr5 28902639 28902984 -174182548 - THE1A LTR MaLR 0 355 1 4948 106 4 0 chr5 28902985 28903693 -174181839 + L1PA14 LINE L1 6880 7590 -9 537 140 0 20 chr5 28906536 28906636 -174178896 + AluY SINE Alu 200 297 -14 190 273 66 58 chr5 28906847 28906968 -174178564 - MIR SINE MIR -81 181 60 2344 48 30 0 chr5 28907366 28907486 -174178046 + AluY SINE Alu 1 116 -195 369 0 0 0 chr5 28907486 28907527 -174178005 + (CA)n Simple_repeat Simple_repeat 2 42 0 2344 48 30 0 chr5 28907527 28907701 -174177831 + AluY SINE Alu 116 304 -7 319 318 27 0 chr5 28910366 28910476 -174175056 - L2 LINE L2 -8 3305 3193 296 295 0 0 chr5 28910536 28910614 -174174918 + (TG)n Simple_repeat Simple_repeat 1 78 0 387 0 0 0 chr5 28910650 28910693 -174174839 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1828 153 0 27 chr5 28910698 28910992 -174174540 - AluSx SINE Alu -26 286 1 29 70 0 0 chr5 28911089 28911146 -174174386 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr5 28911188 28911209 -174174323 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 28911385 28911422 -174174110 + AT_rich Low_complexity Low_complexity 1 37 0 195 343 102 9 chr5 28912298 28912406 -174173126 + MIR SINE MIR 66 183 -79 28 48 0 0 chr5 28912532 28912574 -174172958 + AT_rich Low_complexity Low_complexity 1 42 0 439 342 74 0 chr5 28913033 28913223 -174172309 + LTR16A LTR ERVL 146 349 -101 3130 189 42 31 chr5 28913246 28913965 -174171567 + LTR8A LTR ERV1 1 727 0 1278 94 0 21 chr5 28915493 28915506 -174170026 + AluY SINE Alu 121 133 -178 2402 63 0 19 chr5 28915506 28915823 -174169709 + AluY SINE Alu 1 311 0 1278 94 0 21 chr5 28915823 28916001 -174169531 + AluY SINE Alu 133 308 -3 727 352 150 37 chr5 28917243 28917298 -174168234 + L2 LINE L2 1882 1929 -1343 2225 104 0 0 chr5 28917298 28917605 -174167927 - AluSx SINE Alu -5 307 1 727 352 150 37 chr5 28917605 28917629 -174167903 + L2 LINE L2 1929 1949 -1323 2281 196 72 48 chr5 28917629 28918339 -174167193 - LTR8A LTR ERV1 0 727 1 727 352 150 37 chr5 28918339 28918409 -174167123 + L2 LINE L2 1949 2010 -1262 4776 113 7 7 chr5 28918409 28919100 -174166432 - LTR8 LTR ERV1 0 691 1 727 352 150 37 chr5 28919100 28919989 -174165543 + L2 LINE L2 2010 3040 -232 301 285 134 47 chr5 28920243 28920415 -174165117 + MIR3 SINE MIR 19 205 -3 29 28 0 0 chr5 28920438 28920474 -174165058 + AT_rich Low_complexity Low_complexity 1 36 0 307 274 151 28 chr5 28921770 28922022 -174163510 - L1ME4a LINE L1 -126 5995 5713 27 29 0 0 chr5 28922108 28922142 -174163390 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr5 28922506 28922541 -174162991 + AT_rich Low_complexity Low_complexity 1 35 0 2009 165 12 0 chr5 28922924 28923257 -174162275 + MER1B DNA MER1_type 1 337 0 431 313 65 45 chr5 28923260 28923596 -174161936 - L1ME3A LINE L1 -264 5906 5564 29 28 0 0 chr5 28923647 28923683 -174161849 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 28924050 28924083 -174161449 + AT_rich Low_complexity Low_complexity 1 33 0 228 312 32 21 chr5 28924477 28924570 -174160962 + MIR SINE MIR 53 146 -116 202 200 0 29 chr5 28925225 28925295 -174160237 + (TA)n Simple_repeat Simple_repeat 1 68 0 234 0 0 0 chr5 28925317 28925343 -174160189 + (CA)n Simple_repeat Simple_repeat 1 26 0 612 0 0 0 chr5 28926736 28926804 -174158728 + (TA)n Simple_repeat Simple_repeat 1 68 0 1119 197 49 116 chr5 28926942 28927349 -174158183 + MLT1B LTR MaLR 11 390 0 237 65 0 0 chr5 28927486 28927517 -174158015 + (TG)n Simple_repeat Simple_repeat 2 32 0 2153 90 6 26 chr5 28927893 28928204 -174157328 + AluY SINE Alu 1 305 -6 1938 118 0 0 chr5 28928221 28928529 -174157003 + AluSq SINE Alu 21 328 0 26 50 0 0 chr5 28929247 28929287 -174156245 + AT_rich Low_complexity Low_complexity 1 40 0 1140 243 35 30 chr5 28929305 28929671 -174155861 - MER93b LTR ERV1 -1 372 5 884 149 7 0 chr5 28929824 28929965 -174155567 - MER50 LTR ERV1 -23 711 570 225 0 0 0 chr5 28980323 28980348 -174105184 + (A)n Simple_repeat Simple_repeat 1 25 0 1886 118 3 3 chr5 28980358 28980647 -174104885 + AluY SINE Alu 1 289 -22 262 385 7 14 chr5 28980967 28981115 -174104417 + MLT2E LTR ERVL 32 178 -450 21 0 0 0 chr5 28982107 28982128 -174103404 + AT_rich Low_complexity Low_complexity 1 21 0 416 172 0 43 chr5 28982177 28982270 -174103262 + MER57-int LTR ERV1 5257 5345 -2192 24 53 0 0 chr5 28982288 28982326 -174103206 + AT_rich Low_complexity Low_complexity 1 38 0 34 55 0 0 chr5 28982372 28982427 -174103105 + AT_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr5 28982650 28982674 -174102858 + AT_rich Low_complexity Low_complexity 1 24 0 5272 48 0 0 chr5 28983331 28983975 -174101557 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 28983975 28984003 -174101529 + AT_rich Low_complexity Low_complexity 1 28 0 360 64 0 0 chr5 28984268 28984315 -174101217 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 459 293 7 0 chr5 28984848 28984995 -174100537 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 28984995 28985019 -174100513 + AT_rich Low_complexity Low_complexity 1 24 0 692 308 40 7 chr5 28985105 28985381 -174100151 - Charlie2 DNA MER1_type -2155 627 343 431 237 58 53 chr5 28985405 28985612 -174099920 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 28985663 28985708 -174099824 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 857 239 44 17 chr5 28985891 28986205 -174099327 - AluY SINE Alu 0 322 1 375 226 24 0 chr5 28986322 28986406 -174099126 + L1MD3 LINE L1 6742 6827 -1168 1905 246 82 24 chr5 28986513 28987183 -174098349 + L1MCb LINE L1 435 1143 -4902 2667 245 145 26 chr5 28987185 28987311 -174098221 + L1MD3 LINE L1 5186 4419 -1727 2216 76 13 3 chr5 28987311 28987612 -174097920 + AluY SINE Alu 1 304 -7 2667 245 145 26 chr5 28987612 28988719 -174096813 + L1MD3 LINE L1 4418 5392 -754 2414 204 87 25 chr5 28988714 28989348 -174096184 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 28989457 28989654 -174095878 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 28989830 28989917 -174095615 - L2 LINE L2 -41 3231 3141 2285 98 3 0 chr5 28990187 28990494 -174095038 + AluSg1 SINE Alu 1 308 -1 21 0 0 0 chr5 28991315 28991336 -174094196 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 28992602 28992632 -174092900 + AT_rich Low_complexity Low_complexity 1 30 0 673 273 25 50 chr5 28993621 28993863 -174091669 - L1MD3 LINE L1 -1018 6977 6742 304 209 48 19 chr5 28993861 28993966 -174091566 + L1MD3 LINE L1 7880 7987 -8 * 2288 57 43 10 chr5 28993980 28994281 -174091251 + AluY SINE Alu 1 311 0 303 177 0 0 chr5 28994402 28994464 -174091068 + CT-rich Low_complexity Low_complexity 1 62 0 345 24 0 0 chr5 28994898 28994940 -174090592 + (CA)n Simple_repeat Simple_repeat 1 42 0 3225 62 0 0 chr5 28995083 28995499 -174090033 - L1PA5 LINE L1 -8 6146 5731 1384 43 0 0 chr5 28995499 28995663 -174089869 + L1PA5 LINE L1 5574 5737 -417 26 30 0 0 chr5 28996211 28996244 -174089288 + AT_rich Low_complexity Low_complexity 1 33 0 203 301 14 0 chr5 28997223 28997296 -174088236 + (TATG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr5 28997642 28997675 -174087857 + AT_rich Low_complexity Low_complexity 1 33 0 225 255 0 0 chr5 28999377 28999424 -174086108 + (CA)n Simple_repeat Simple_repeat 2 48 0 241 288 85 17 chr5 29000137 29000255 -174085277 + L3 LINE CR1 839 964 -613 199 374 12 0 chr5 29000522 29000605 -174084927 + L3 LINE CR1 1074 1157 -420 511 314 5 32 chr5 29000928 29001116 -174084416 + HERVL-F LTR ERVL 767 949 -4815 475 270 13 26 chr5 29001398 29001550 -174083982 + HERVL-F LTR ERVL 3100 3249 -2405 814 282 53 8 chr5 29001582 29001848 -174083684 + HERVL-F LTR ERVL 3364 3641 -2123 2574 274 63 20 chr5 29001854 29003101 -174082431 + L1ME1 LINE L1 4861 6160 -6 348 304 27 9 chr5 29003132 29003244 -174082288 + HERVL-F LTR ERVL 4442 4555 -1099 361 340 77 10 chr5 29003366 29003560 -174081972 + HERVL-F LTR ERVL 4745 4951 -813 653 288 49 57 chr5 29003611 29004237 -174081295 + HERVL-F LTR ERVL 4997 5752 -12 765 309 78 45 chr5 29004238 29004790 -174080742 + MLT2F LTR ERVL 46 655 -8 237 62 0 0 chr5 29004970 29005002 -174080530 - L1P LINE L1 -746 5420 5389 774 333 62 6 chr5 29005061 29005397 -174080135 + LTR16B LTR ERVL 110 464 0 319 286 27 81 chr5 29005710 29005737 -174079795 + MLT1G LTR MaLR 221 248 -342 3804 148 3 0 chr5 29005737 29006337 -174079195 + LTR43 LTR ERV1 1 602 0 319 286 27 81 chr5 29006337 29006494 -174079038 + MLT1G LTR MaLR 248 395 -195 467 310 94 19 chr5 29006524 29006737 -174078795 + MLT1G LTR MaLR 346 574 -16 2370 117 16 19 chr5 29006849 29007225 -174078307 - THE1C LTR MaLR 0 375 1 1895 141 3 14 chr5 29007762 29008052 -174077480 + AluSx SINE Alu 5 291 -21 321 159 65 9 chr5 29008124 29008231 -174077301 + (TA)n Simple_repeat Simple_repeat 1 113 0 203 331 124 0 chr5 29008231 29008352 -174077180 - MIR SINE MIR 0 262 127 488 95 27 0 chr5 29010493 29010567 -174074965 + MADE1 DNA Mariner 1 76 -4 1843 129 0 4 chr5 29010993 29011271 -174074261 + AluSq SINE Alu 35 311 -2 1258 295 28 36 chr5 29011480 29011951 -174073581 - MLT1C LTR MaLR 0 467 1 2157 185 18 8 chr5 29012161 29012556 -174072976 - MSTB LTR MaLR -27 399 1 185 347 20 0 chr5 29012699 29012748 -174072784 - MIR SINE MIR -160 102 53 22 0 0 0 chr5 29013655 29013677 -174071855 + AT_rich Low_complexity Low_complexity 1 22 0 414 400 91 9 chr5 29013686 29013916 -174071616 + MER115 DNA AcHobo 1 249 -444 * 749 384 12 21 chr5 29013911 29014447 -174071085 + MER115 DNA AcHobo 89 693 0 260 284 14 0 chr5 29015811 29015885 -174069647 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 184 375 0 0 chr5 29015926 29015990 -174069542 - L3 LINE CR1 -3 1574 1511 2705 13 0 0 chr5 29016601 29016904 -174068628 + AluYa5 SINE Alu 1 303 -8 29 0 0 0 chr5 29017003 29017032 -174068500 + AT_rich Low_complexity Low_complexity 1 29 0 180 224 0 86 chr5 29017573 29017631 -174067901 - MIR3 SINE MIR -44 164 112 325 317 107 4 chr5 29018466 29018747 -174066785 + L1M4 LINE L1 2662 2971 -3175 264 160 0 0 chr5 29018841 29018891 -174066641 + L1ME3A LINE L1 1339 1388 -4996 * 3307 215 34 37 chr5 29018886 29019780 -174065752 + L1MB5 LINE L1 5276 6166 -8 598 278 111 74 chr5 29019882 29020214 -174065318 + L1ME3A LINE L1 3830 4148 -2234 2060 91 14 0 chr5 29020214 29020510 -174065022 + L1PA13 LINE L1 5845 6144 -19 598 278 111 74 chr5 29020510 29021132 -174064400 + L1ME3A LINE L1 4148 4746 -1636 312 27 0 0 chr5 29021132 29021169 -174064363 + (TG)n Simple_repeat Simple_repeat 1 37 0 598 278 111 74 chr5 29021169 29021402 -174064130 + L1ME3A LINE L1 4746 4969 -1413 2261 83 0 13 chr5 29021402 29021702 -174063830 + AluY SINE Alu 1 296 -15 598 278 111 74 chr5 29021702 29021841 -174063691 + L1ME3A LINE L1 4969 5207 -1175 2413 218 31 12 chr5 29021841 29022354 -174063178 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 29022356 29022444 -174063088 + Tigger7 DNA MER2_type 2400 2487 0 2252 90 0 7 chr5 29022463 29022764 -174062768 + AluY SINE Alu 13 311 0 480 332 40 35 chr5 29022767 29023137 -174062395 + L1ME3A LINE L1 5216 5587 -795 1641 176 46 30 chr5 29023187 29023556 -174061976 + THE1C LTR MaLR 1 375 0 8855 151 30 36 chr5 29023558 29025145 -174060387 + THE1C-int LTR MaLR 3 1579 -1 1247 203 67 41 chr5 29025145 29025483 -174060049 + THE1C LTR MaLR 1 402 -24 263 264 50 8 chr5 29025551 29025672 -174059860 + L1ME3A LINE L1 5691 5816 -590 593 296 40 25 chr5 29025709 29025986 -174059546 + L1ME3A LINE L1 6121 6401 -5 24 53 0 0 chr5 29026116 29026154 -174059378 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 29028568 29028593 -174056939 + AT_rich Low_complexity Low_complexity 1 25 0 955 238 84 82 chr5 29029342 29029842 -174055690 - MLT1D LTR MaLR -2 503 3 4011 108 26 8 chr5 29030055 29030678 -174054854 + L1PA10 LINE L1 5523 6156 -12 288 346 23 30 chr5 29031360 29031493 -174054039 - MLT2E LTR ERVL -460 168 37 225 0 0 0 chr5 29031659 29031684 -174053848 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 324 0 0 0 chr5 29031683 29031719 -174053813 + (CA)n Simple_repeat Simple_repeat 1 36 0 8185 229 25 59 chr5 29032255 29035288 -174050244 + L1P5 LINE L1 2567 5491 -660 34 24 0 0 chr5 29035384 29035425 -174050107 + AT_rich Low_complexity Low_complexity 1 41 0 584 341 48 8 chr5 29036750 29037002 -174048530 - MIR SINE MIR 0 262 1 23 54 0 0 chr5 29037353 29037390 -174048142 + AT_rich Low_complexity Low_complexity 1 37 0 305 174 116 0 chr5 29037582 29037668 -174047864 + L1MB3 LINE L1 6081 6176 -7 260 213 25 12 chr5 29037839 29037919 -174047613 + HAL1b LINE L1 1266 1346 -2 22 70 0 0 chr5 29037994 29038037 -174047495 + AT_rich Low_complexity Low_complexity 1 43 0 311 149 0 0 chr5 29038914 29038961 -174046571 + L1MA6 LINE L1 6062 6108 -192 1426 218 0 10 chr5 29039206 29039499 -174046033 + AluJo SINE Alu 2 291 -21 278 344 16 49 chr5 29039552 29039674 -174045858 - L2 LINE L2 -11 3261 3144 252 0 0 0 chr5 29040032 29040060 -174045472 + (TA)n Simple_repeat Simple_repeat 2 29 0 183 24 49 49 chr5 29040219 29040260 -174045272 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 472 134 0 0 chr5 29040264 29040331 -174045201 - AluS SINE Alu -26 286 220 337 276 0 35 chr5 29040492 29040579 -174044953 + L2 LINE L2 3227 3310 -3 1967 120 97 32 chr5 29040659 29041001 -174044531 + THE1B LTR MaLR 1 364 0 208 360 131 48 chr5 29041328 29041994 -174043538 - L2 LINE L2 -978 2336 1616 192 396 19 0 chr5 29042078 29042184 -174043348 - L2 LINE L2 -1840 1474 1367 1533 132 0 0 chr5 29044125 29044365 -174041167 + AluSq SINE Alu 68 307 0 210 143 0 0 chr5 29044464 29044499 -174041033 + (TA)n Simple_repeat Simple_repeat 2 36 0 1144 221 54 27 chr5 29044931 29045266 -174040266 + MER2 DNA MER2_type 1 344 0 1464 187 13 97 chr5 29046767 29047186 -174038346 - MER67C LTR ERV1 -243 271 1 326 275 0 0 chr5 29048639 29048719 -174036813 - MER96 DNA MER1_type? -78 97 18 963 325 32 3 chr5 29048725 29049039 -174036493 - MLT2F LTR ERVL -180 483 161 333 203 0 0 chr5 29049069 29049133 -174036399 - MLT2F LTR ERVL -596 67 4 561 319 86 32 chr5 29050809 29051217 -174034315 - MLT1J1 LTR MaLR -14 432 3 28 61 0 0 chr5 29051309 29051358 -174034174 + AT_rich Low_complexity Low_complexity 1 49 0 597 261 96 43 chr5 29052581 29052816 -174032716 - MER110 LTR ERV1 -7 484 228 2310 92 3 0 chr5 29052816 29053110 -174032422 + AluSc SINE Alu 1 295 -14 597 261 96 43 chr5 29053110 29053177 -174032355 - MER110 LTR ERV1 -263 228 166 894 202 30 20 chr5 29053635 29053833 -174031699 - MER3 DNA MER1_type -5 204 5 23 33 0 0 chr5 29054237 29054267 -174031265 + AT_rich Low_complexity Low_complexity 1 30 0 432 118 0 0 chr5 29054685 29054753 -174030779 + (TG)n Simple_repeat Simple_repeat 2 69 0 245 227 0 45 chr5 29055164 29055230 -174030302 - MIR SINE MIR -5 257 195 792 251 31 1 chr5 29055620 29055857 -174029675 - L1ME2 LINE L1 -259 5905 5712 1854 141 7 7 chr5 29056118 29056409 -174029123 + AluSp SINE Alu 1 291 -22 25 0 0 0 chr5 29056409 29056434 -174029098 + AT_rich Low_complexity Low_complexity 1 25 0 315 0 0 0 chr5 29056658 29056693 -174028839 + (CA)n Simple_repeat Simple_repeat 1 35 0 198 277 50 50 chr5 29056835 29056936 -174028596 + MIR SINE MIR 52 152 -110 376 203 0 0 chr5 29057142 29057221 -174028311 - L1 LINE L1 -1729 4417 4339 4790 171 5 42 chr5 29057246 29059054 -174026478 + L1PA6 LINE L1 4409 6154 0 2532 188 32 9 chr5 29059056 29059610 -174025922 + L1MA4 LINE L1 5724 6290 -10 23 0 0 0 chr5 29059667 29059690 -174025842 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr5 29060321 29060357 -174025175 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 29060390 29060418 -174025114 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 29060594 29060627 -174024905 + AT_rich Low_complexity Low_complexity 1 33 0 291 302 147 16 chr5 29060864 29060993 -174024539 + MIR SINE MIR 109 254 -8 29 70 0 0 chr5 29061385 29061442 -174024090 + AT_rich Low_complexity Low_complexity 1 57 0 214 261 0 0 chr5 29061511 29061557 -174023975 + (CATA)n Simple_repeat Simple_repeat 3 48 0 225 0 0 0 chr5 29062198 29062223 -174023309 + (A)n Simple_repeat Simple_repeat 1 25 0 2253 50 3 3 chr5 29062232 29062543 -174022989 + AluY SINE Alu 1 311 0 1494 180 64 15 chr5 29063333 29063661 -174021871 + MER2 DNA MER2_type 1 344 0 371 365 72 14 chr5 29065400 29065677 -174019855 + LTR16A LTR ERVL 78 370 -80 962 256 16 20 chr5 29065753 29065999 -174019533 + LTR53 LTR ERVL 189 433 -86 5734 40 0 1 chr5 29066024 29066727 -174018805 - L1PA4 LINE L1 -1073 5073 4372 7354 36 2 0 chr5 29066727 29067804 -174017728 + L1PA4 LINE L1 5070 6149 -6 186 143 0 0 chr5 29067879 29067914 -174017618 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 300 341 22 7 chr5 29067922 29068060 -174017472 - MIR SINE MIR -109 153 14 27 81 0 0 chr5 29068109 29068171 -174017361 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr5 29068420 29068450 -174017082 + AT_rich Low_complexity Low_complexity 1 30 0 544 160 47 7 chr5 29068613 29068763 -174016769 + GA-rich Low_complexity Low_complexity 4 159 0 226 341 155 0 chr5 29069758 29069887 -174015645 - MIR3 SINE MIR -3 205 57 329 315 132 52 chr5 29070327 29070714 -174014818 + L2 LINE L2 2891 3308 -5 1799 215 47 92 chr5 29071085 29071686 -174013846 - MLT1E2 LTR MaLR 0 626 53 831 217 6 0 chr5 29073423 29073589 -174011943 + FAM SINE Alu 1 167 -8 942 187 115 19 chr5 29074961 29075170 -174010362 + MSTA LTR MaLR 197 425 -3 7983 202 18 13 chr5 29075170 29076811 -174008721 + MSTA-int LTR MaLR 2 1651 0 1885 173 96 10 chr5 29076811 29077205 -174008327 + MSTA LTR MaLR 1 428 0 2466 118 14 0 chr5 29077797 29078163 -174007369 + THE1C LTR MaLR 1 371 -4 27 0 0 0 chr5 29078342 29078369 -174007163 + AT_rich Low_complexity Low_complexity 1 27 0 1452 176 45 62 chr5 29079448 29080150 -174005382 - pTR5 LTR ERV1 -513 1480 119 2256 103 0 0 chr5 29082784 29083084 -174002448 - AluY SINE Alu -9 302 3 307 325 96 28 chr5 29083338 29083740 -174001792 + L1MC/D LINE L1 5482 5900 -347 706 69 6 114 chr5 29084070 29084245 -174001287 + AluSp/q SINE Alu 158 313 0 459 0 0 0 chr5 29084247 29084298 -174001234 + (TA)n Simple_repeat Simple_repeat 1 51 0 1179 280 117 42 chr5 29084399 29086411 -173999121 - L1MCc LINE L1 -3405 3536 1207 180 0 0 0 chr5 29086642 29086662 -173998870 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 270 380 9 0 chr5 29086682 29086795 -173998737 - ERVL LTR ERVL -2132 3632 3519 427 364 67 12 chr5 29087056 29087383 -173998149 - ERVL LTR ERVL -2536 3228 2884 744 59 20 0 chr5 29087384 29087543 -173997989 + AluYa5/8 SINE Alu 177 337 0 781 325 21 64 chr5 29087653 29088217 -173997315 - ERVL LTR ERVL -3046 2718 2179 21 0 0 0 chr5 29091500 29091521 -173994011 + AT_rich Low_complexity Low_complexity 1 21 0 2184 82 0 27 chr5 29092612 29092928 -173992604 - AluY SINE Alu 0 308 1 262 212 30 0 chr5 29093116 29093182 -173992350 + (CATA)n Simple_repeat Simple_repeat 1 68 0 1336 178 4 47 chr5 29093246 29093521 -173992011 - AluJo SINE Alu -13 299 37 207 246 0 66 chr5 29093874 29093935 -173991597 - L2 LINE L2 -8 3305 3249 2188 82 7 13 chr5 29094577 29094882 -173990650 - AluY SINE Alu -3 308 6 28 61 0 0 chr5 29096597 29096646 -173988886 + AT_rich Low_complexity Low_complexity 1 49 0 468 286 103 93 chr5 29097097 29097794 -173987738 + HAL1 LINE L1 963 1666 -841 191 149 0 21 chr5 29098149 29098196 -173987336 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr5 29098240 29098261 -173987271 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 29098763 29098793 -173986739 + AT_rich Low_complexity Low_complexity 1 30 0 271 289 52 21 chr5 29099602 29099699 -173985833 - MLT1H LTR MaLR -195 354 255 2456 114 28 14 chr5 29099700 29100059 -173985473 - THE1B LTR MaLR 0 364 1 269 337 125 19 chr5 29100145 29100409 -173985123 - L2 LINE L2 -759 2555 2264 1834 133 0 14 chr5 29100767 29101099 -173984433 - AluSx SINE Alu 0 338 11 183 308 0 87 chr5 29101363 29101467 -173984065 + MIR SINE MIR 80 174 -88 267 258 0 32 chr5 29102372 29102465 -173983067 + (TA)n Simple_repeat Simple_repeat 1 90 0 511 158 21 95 chr5 29102648 29102894 -173982638 + MER51A LTR ERV1 1 162 -215 * 1797 139 53 10 chr5 29102887 29103189 -173982343 + MER51B LTR ERV1 63 377 0 1678 170 22 19 chr5 29103641 29103958 -173981574 + MER1A DNA MER1_type 1 318 -211 673 118 0 20 chr5 29103958 29104060 -173981472 - MER4A LTR ERV1 0 664 565 * 805 212 110 57 chr5 29104057 29104321 -173981211 - LTR21A LTR ERV1 -16 489 212 578 190 0 0 chr5 29104489 29104589 -173980943 - MER4B LTR ERV1 -96 514 415 2322 61 0 3 chr5 29104592 29104886 -173980646 + AluY SINE Alu 4 296 -15 482 305 37 11 chr5 29104958 29105145 -173980387 + L1ME LINE L1 5515 5706 -458 334 118 0 0 chr5 29105155 29105232 -173980300 + AluJ/FRAM SINE Alu 232 308 0 248 175 0 0 chr5 29105232 29105272 -173980260 - MER4A LTR ERV1 -188 476 437 500 137 7 38 chr5 29105289 29105435 -173980097 - MER4A LTR ERV1 -203 461 262 531 144 21 10 chr5 29105436 29105533 -173979999 - MER4A LTR ERV1 -566 98 1 1323 138 24 0 chr5 29105533 29105743 -173979789 + MER1A DNA MER1_type 315 529 0 2201 81 0 7 chr5 29105872 29106169 -173979363 + AluY SINE Alu 16 310 -1 22 0 0 0 chr5 29106376 29106398 -173979134 + AT_rich Low_complexity Low_complexity 1 22 0 1009 172 37 5 chr5 29106508 29106723 -173978809 - L1MB3 LINE L1 -3 6180 5959 196 303 45 0 chr5 29106814 29106880 -173978652 + L2 LINE L2 2290 2358 -956 1557 212 5 61 chr5 29106990 29107400 -173978132 + MLT1B LTR MaLR 4 390 0 371 314 8 17 chr5 29107784 29107902 -173977630 - MER5A DNA MER1_type -30 159 43 773 257 87 30 chr5 29109025 29109360 -173976172 - MLT1A1 LTR MaLR -4 361 8 428 239 62 9 chr5 29109972 29110085 -173975447 + MER51D LTR ERV1 463 581 -76 21 36 0 0 chr5 29110225 29110253 -173975279 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 29110457 29110508 -173975024 + AT_rich Low_complexity Low_complexity 1 51 0 373 329 55 20 chr5 29111118 29111264 -173974268 - MLT1K LTR MaLR -342 246 96 236 128 0 21 chr5 29111376 29111423 -173974109 + (TA)n Simple_repeat Simple_repeat 1 46 0 1693 219 3 16 chr5 29112431 29112801 -173972731 + MLT1A1 LTR MaLR 1 365 0 186 397 23 8 chr5 29112838 29112969 -173972563 + MIR SINE MIR 109 241 -21 263 232 0 29 chr5 29113075 29113144 -173972388 + MLT1H LTR MaLR 96 162 -387 401 286 71 24 chr5 29113468 29113636 -173971896 + Charlie8 DNA MER1_type 62 237 -2180 383 98 16 0 chr5 29113734 29113795 -173971737 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 370 143 25 chr5 29113993 29114112 -173971420 - L2 LINE L2 -11 3261 3129 330 304 87 72 chr5 29114224 29114333 -173971199 - L2 LINE L2 -497 2817 2711 180 0 0 0 chr5 29114333 29114353 -173971179 + (TG)n Simple_repeat Simple_repeat 1 20 0 330 304 87 72 chr5 29114353 29114519 -173971013 - L2 LINE L2 -603 2711 2538 1649 225 11 3 chr5 29115731 29116091 -173969441 + MLT1A1 LTR MaLR 1 363 -2 22 35 0 0 chr5 29117035 29117064 -173968468 + AT_rich Low_complexity Low_complexity 1 29 0 181 386 50 10 chr5 29117089 29117190 -173968342 + L2 LINE L2 3164 3268 -4 615 187 8 8 chr5 29117938 29118061 -173967471 + FLAM_A SINE Alu 1 123 -10 229 313 40 40 chr5 29119420 29119519 -173966013 - MIR SINE MIR -87 121 23 23 0 0 0 chr5 29120604 29120627 -173964905 + AT_rich Low_complexity Low_complexity 1 23 0 243 260 20 0 chr5 29120838 29120938 -173964594 + (TATAA)n Simple_repeat Simple_repeat 2 103 0 308 329 106 59 chr5 29121634 29122038 -173963494 + L1M4 LINE L1 3540 3962 -2184 233 307 85 20 chr5 29122081 29122234 -173963298 + L1M4 LINE L1 4030 4192 -1954 466 338 52 54 chr5 29122354 29122857 -173962675 + L1M4 LINE L1 4332 4833 -1313 584 271 109 57 chr5 29122923 29123307 -173962225 + L1MC2 LINE L1 28 431 -5995 578 239 24 6 chr5 29123413 29123580 -173961952 + L1MC2 LINE L1 5538 5707 -2358 3804 187 54 67 chr5 29123601 29124565 -173960967 + L1MCa LINE L1 47 997 -5429 1107 220 68 114 chr5 29124565 29124960 -173960572 - MSTD LTR MaLR 0 396 20 1478 157 111 98 chr5 29124968 29125447 -173960085 + L1MCa LINE L1 998 1482 -4944 * 2219 223 74 39 chr5 29125444 29125595 -173959937 + L1MC2 LINE L1 5693 5837 -787 1815 167 39 25 chr5 29125595 29125954 -173959578 + THE1B LTR MaLR 1 364 0 11339 95 9 2 chr5 29125954 29127523 -173958009 + THE1B-int LTR MaLR 1 1580 0 2069 148 39 20 chr5 29127523 29127880 -173957652 + THE1B LTR MaLR 1 364 0 2219 223 74 39 chr5 29127880 29128438 -173957094 + L1MC2 LINE L1 5836 6429 -195 209 238 63 0 chr5 29128695 29128758 -173956774 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 1006 297 95 48 chr5 29128831 29129966 -173955566 + L1ME2 LINE L1 1171 2252 -4174 2792 173 23 17 chr5 29129966 29130487 -173955045 - MER1A DNA MER1_type -3 524 1 1006 297 95 48 chr5 29130487 29131345 -173954187 + L1ME2 LINE L1 2252 3420 -3006 423 231 103 0 chr5 29131349 29131466 -173954066 - MLT1H1 LTR MaLR 0 555 427 509 383 17 14 chr5 29131669 29132014 -173953518 - LTR16A LTR ERVL 0 450 105 1690 258 99 21 chr5 29132112 29132839 -173952693 + L1ME2 LINE L1 5542 6324 -120 266 194 14 0 chr5 29132859 29132931 -173952601 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 398 244 119 42 chr5 29133164 29133204 -173952328 + L1MC5 LINE L1 7709 7744 -217 1487 201 3 33 chr5 29133204 29133508 -173952024 - AluJb SINE Alu -17 295 1 398 244 119 42 chr5 29133508 29133660 -173951872 + L1MC5 LINE L1 7744 7916 -45 670 243 58 40 chr5 29135115 29135336 -173950196 + MER20 DNA MER1_type 1 219 0 372 298 32 25 chr5 29135377 29135535 -173949997 + MIR SINE MIR 101 259 -3 324 48 0 0 chr5 29135614 29135656 -173949876 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 294 302 9 9 chr5 29136196 29136312 -173949220 + L1MCc LINE L1 82 197 -6226 1096 274 80 34 chr5 29136638 29137265 -173948267 + L1M4 LINE L1 4654 5309 -837 226 267 78 33 chr5 29137852 29137942 -173947590 + MLT1I LTR MaLR 73 166 -243 1028 236 65 96 chr5 29139684 29139735 -173945797 - MLT2B1 LTR ERVL 0 520 469 482 0 17 0 chr5 29139735 29139793 -173945739 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1028 236 65 96 chr5 29139793 29140018 -173945514 - MLT2B1 LTR ERVL -51 469 239 195 42 0 0 chr5 29140018 29140042 -173945490 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1028 236 65 96 chr5 29140042 29140298 -173945234 - MLT2B1 LTR ERVL -281 239 3 310 295 27 9 chr5 29141245 29141357 -173944175 - MLT1J2 LTR MaLR -281 169 56 200 286 20 20 chr5 29141923 29142021 -173943511 + (TATATG)n Simple_repeat Simple_repeat 3 100 0 39 0 0 0 chr5 29142158 29142197 -173943335 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr5 29142339 29142380 -173943152 + AT_rich Low_complexity Low_complexity 1 41 0 2713 179 45 70 chr5 29142543 29143230 -173942302 - L1MA10 LINE L1 -14 6320 5651 1488 227 28 6 chr5 29143230 29143587 -173941945 + MLT1A1 LTR MaLR 1 365 0 357 260 68 20 chr5 29143599 29143745 -173941787 + L1 LINE L1 4950 5102 -1044 243 300 106 76 chr5 29143748 29144171 -173941361 - HsTC2a DNA Tc2 -279 465 30 22 0 0 0 chr5 29144342 29144364 -173941168 + AT_rich Low_complexity Low_complexity 1 22 0 1989 131 3 13 chr5 29144627 29144939 -173940593 + AluSx SINE Alu 4 312 0 354 23 0 0 chr5 29145704 29145747 -173939785 + (TG)n Simple_repeat Simple_repeat 2 44 0 26 93 0 0 chr5 29146455 29146530 -173939002 + AT_rich Low_complexity Low_complexity 1 75 0 1295 199 6 67 chr5 29198178 29198494 -173887038 + AluJo SINE Alu 1 297 -15 214 254 7 148 chr5 29198686 29198828 -173886704 - L2 LINE L2 -32 3281 3160 21 0 0 0 chr5 29198966 29198987 -173886545 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr5 29199960 29199996 -173885536 + AT_rich Low_complexity Low_complexity 1 36 0 189 74 0 0 chr5 29202492 29202519 -173883013 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 312 231 109 0 chr5 29203651 29203747 -173881785 - MLT1I LTR MaLR -5 434 310 400 311 47 31 chr5 29203850 29204043 -173881489 - MLT1J2 LTR MaLR -254 196 1 341 197 13 26 chr5 29204306 29204382 -173881150 + L1ME2 LINE L1 5972 6046 -118 24 32 0 0 chr5 29204550 29204581 -173880951 + AT_rich Low_complexity Low_complexity 1 31 0 1809 171 59 35 chr5 29204962 29205384 -173880148 - MSTB1 LTR MaLR 0 432 1 411 73 0 0 chr5 29206320 29206375 -173879157 + (TG)n Simple_repeat Simple_repeat 2 56 0 315 0 0 0 chr5 29207405 29207440 -173878092 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 273 73 53 chr5 29207590 29208050 -173877482 + L1M4 LINE L1 4310 4792 -1354 29 0 0 0 chr5 29208647 29208676 -173876856 + AT_rich Low_complexity Low_complexity 1 29 0 221 333 117 0 chr5 29208691 29208802 -173876730 + MIR SINE MIR 48 171 -91 2104 131 230 2 chr5 29209136 29209532 -173876000 + LTR12 LTR ERV1 2 487 -227 2181 199 75 140 chr5 29209676 29210587 -173874945 - MER21B LTR ERV1 0 902 71 359 138 0 0 chr5 29210685 29210743 -173874789 - MER21A LTR ERV1 -861 70 13 22 0 0 0 chr5 29211170 29211192 -173874340 + AT_rich Low_complexity Low_complexity 1 22 0 8427 120 17 8 chr5 29211222 29212492 -173873040 - HSMAR1 DNA Mariner -5 1282 1 21 0 0 0 chr5 29212522 29212543 -173872989 + AT_rich Low_complexity Low_complexity 1 21 0 21 95 0 0 chr5 29214841 29214904 -173870628 + AT_rich Low_complexity Low_complexity 1 63 0 42 65 0 0 chr5 29215133 29215210 -173870322 + AT_rich Low_complexity Low_complexity 1 77 0 24 32 0 0 chr5 29215744 29215775 -173869757 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 29216007 29216042 -173869490 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 29217045 29217069 -173868463 + AT_rich Low_complexity Low_complexity 1 24 0 1372 88 0 21 chr5 29217362 29217554 -173867978 - AluSg/x SINE Alu -17 295 108 317 230 47 20 chr5 29217824 29217972 -173867560 + L1ME LINE L1 945 1096 -5109 233 250 0 0 chr5 29217979 29218035 -173867497 + L1ME LINE L1 2312 2367 -4029 230 191 21 0 chr5 29218137 29218184 -173867348 + L1ME LINE L1 1161 1208 -4997 2152 184 22 5 chr5 29218323 29218737 -173866795 + MER61C LTR ERV1 14 434 0 763 196 24 100 chr5 29218737 29218987 -173866545 + MER61C-int LTR ERV1 2 232 -4985 * 26891 137 37 28 chr5 29218964 29223791 -173861741 + MER61C-int LTR ERV1 343 5213 -4 2223 181 35 6 chr5 29223791 29224222 -173861310 + MER61C LTR ERV1 6 434 0 393 291 108 21 chr5 29224222 29224656 -173860876 + L1ME LINE L1 1096 1569 -4511 333 323 51 15 chr5 29224630 29224825 -173860707 + L1ME LINE L1 2110 2311 -3769 * 6679 28 0 0 chr5 29224827 29225640 -173859892 + L1PA3 LINE L1 5355 6167 0 780 255 144 23 chr5 29225640 29226076 -173859456 + L1ME LINE L1 2353 2841 -3239 365 304 49 0 chr5 29226077 29226179 -173859353 + L2 LINE L2 3191 3297 -16 2147 113 7 7 chr5 29227169 29227479 -173858053 - AluSg SINE Alu 0 310 1 181 250 0 0 chr5 29227551 29227591 -173857941 - L2 LINE L2 -1 3312 3273 203 176 0 0 chr5 29228012 29228046 -173857486 + (TG)n Simple_repeat Simple_repeat 1 34 0 384 240 118 36 chr5 29228046 29228267 -173857265 - Charlie4 DNA MER1_type -20 1941 1703 439 330 54 10 chr5 29228759 29228962 -173856570 - MIR SINE MIR -26 236 25 216 97 0 0 chr5 29229455 29229486 -173856046 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr5 29229654 29229690 -173855842 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 29230685 29230707 -173854825 + AT_rich Low_complexity Low_complexity 1 22 0 1084 110 0 0 chr5 29230831 29230986 -173854546 - AluSp/q SINE Alu 0 313 159 198 349 105 0 chr5 29232234 29232386 -173853146 - L2 LINE L2 -961 2353 2186 1526 158 26 8 chr5 29232625 29232890 -173852642 - AluSx SINE Alu -4 308 39 186 355 53 26 chr5 29232948 29233137 -173852395 + L2 LINE L2 2660 2853 -461 299 287 23 0 chr5 29233394 29233481 -173852051 + GA-rich Low_complexity Low_complexity 3 91 0 21 0 0 0 chr5 29233921 29233942 -173851590 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 29234661 29234682 -173850850 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 29235135 29235173 -173850359 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 29235190 29235218 -173850314 + AT_rich Low_complexity Low_complexity 1 28 0 31 44 0 0 chr5 29235265 29235310 -173850222 + AT_rich Low_complexity Low_complexity 1 45 0 221 263 0 154 chr5 29236191 29236450 -173849082 + L2 LINE L2 1570 1788 -1526 238 175 0 0 chr5 29236459 29236499 -173849033 + Alu SINE Alu 3 42 -266 466 99 0 0 chr5 29236499 29236570 -173848962 + Alu SINE Alu 232 302 -10 284 329 183 30 chr5 29236676 29237108 -173848424 + L2 LINE L2 1854 2351 -963 1083 358 64 17 chr5 29237553 29238308 -173847224 - HERV16 LTR ERVL -2213 2783 1994 262 242 30 40 chr5 29238317 29238416 -173847116 - MLT1I LTR MaLR -41 368 271 454 317 77 59 chr5 29239295 29239633 -173845899 + LTR33 LTR ERVL 3 346 -175 2561 53 0 0 chr5 29239646 29239950 -173845582 - AluY SINE Alu -7 304 1 22 70 0 0 chr5 29240219 29240262 -173845270 + AT_rich Low_complexity Low_complexity 1 43 0 2147 97 23 3 chr5 29242185 29242485 -173843047 - AluY SINE Alu -5 306 1 206 373 51 0 chr5 29242573 29242691 -173842841 + MIR SINE MIR 118 241 -21 370 230 7 12 chr5 29242835 29242980 -173842552 + MER20 DNA MER1_type 1 219 0 335 310 17 9 chr5 29244815 29244931 -173840601 - L2 LINE L2 -5 3308 3192 26 0 0 0 chr5 29245228 29245254 -173840278 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr5 29246388 29246427 -173839105 + AT_rich Low_complexity Low_complexity 1 39 0 242 236 0 0 chr5 29246517 29246572 -173838960 + L1MC4 LINE L1 6649 6703 -1339 * 256 250 21 73 chr5 29246570 29246666 -173838866 - L1MC4 LINE L1 -1339 6703 6613 195 42 0 0 chr5 29246760 29246784 -173838748 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2418 52 0 13 chr5 29246786 29247091 -173838441 - AluY SINE Alu -10 301 1 231 211 0 0 chr5 29247684 29247736 -173837796 - L1MA9 LINE L1 -13 6299 6248 1694 157 60 43 chr5 29248216 29248585 -173836947 - THE1C LTR MaLR 0 375 1 8955 138 17 38 chr5 29248585 29250195 -173835337 - THE1C-int LTR MaLR 0 1580 4 1195 181 102 42 chr5 29250198 29250552 -173834980 - THE1C LTR MaLR 0 375 1 1648 181 20 16 chr5 29251394 29251697 -173833835 + AluJb SINE Alu 3 306 -6 328 291 9 27 chr5 29252333 29252443 -173833089 + MIR SINE MIR 64 171 -91 1769 117 0 0 chr5 29252627 29252883 -173832649 + AluSx SINE Alu 38 293 -19 32 67 0 0 chr5 29253194 29253254 -173832278 + AT_rich Low_complexity Low_complexity 1 60 0 2307 91 0 0 chr5 29254238 29254535 -173830997 - AluSc SINE Alu -6 303 7 27 87 0 0 chr5 29254828 29254897 -173830635 + AT_rich Low_complexity Low_complexity 1 69 0 1886 122 21 10 chr5 29254965 29255253 -173830279 - AluSx SINE Alu -13 299 9 214 354 51 36 chr5 29256052 29256247 -173829285 + MIR SINE MIR 57 254 -8 2235 164 16 47 chr5 29256328 29256588 -173828944 + L1MA9 LINE L1 5837 6077 -235 715 161 39 15 chr5 29256588 29256718 -173828814 - FLAM_C SINE Alu 0 133 1 2235 164 16 47 chr5 29256718 29256944 -173828588 + L1MA9 LINE L1 6077 6308 -4 524 233 69 31 chr5 29257955 29258114 -173827418 - L1MB7 LINE L1 -7 6177 6013 2590 235 52 25 chr5 29258124 29258163 -173827369 + L1M4 LINE L1 3415 3451 -2695 2390 94 0 0 chr5 29258163 29258472 -173827060 + AluSc SINE Alu 1 309 0 2590 235 52 25 chr5 29258472 29259219 -173826313 + L1M4 LINE L1 3451 4222 -1924 2471 201 23 23 chr5 29259234 29259766 -173825766 + Tigger1 DNA MER2_type 24 555 -1863 1217 277 16 8 chr5 29259766 29260152 -173825380 + L1M4 LINE L1 4696 5084 -1062 2821 85 20 15 chr5 29260405 29260807 -173824725 - MLT2A1 LTR ERVL -40 404 1 41896 93 6 2 chr5 29260807 29266435 -173819097 - HERVL-A1 LTR ERVL 0 5654 4 2802 100 20 35 chr5 29266438 29266478 -173819054 - MLT2A1 LTR ERVL 0 444 405 486 0 0 0 chr5 29266478 29266532 -173819000 + (TA)n Simple_repeat Simple_repeat 2 55 0 2802 100 20 35 chr5 29266532 29266942 -173818590 - MLT2A1 LTR ERVL -39 405 1 680 221 97 66 chr5 29266942 29267231 -173818301 + MLT1D LTR MaLR 152 449 -56 313 276 73 104 chr5 29267830 29268022 -173817510 + L1MC5 LINE L1 7746 7931 -30 2740 7 0 10 chr5 29268450 29268758 -173816774 + AluYa5 SINE Alu 1 305 -6 1121 234 0 58 chr5 29269874 29270233 -173815299 - MER52A LTR ERV1 -34 1721 1384 1584 71 0 0 chr5 29270255 29270451 -173815081 + AluSg/x SINE Alu 113 308 -2 314 287 49 15 chr5 29270640 29270790 -173814742 + MLT1F1 LTR MaLR 417 559 -8 308 224 15 22 chr5 29270877 29271011 -173814521 + (TTA)n Simple_repeat Simple_repeat 2 134 0 264 229 0 0 chr5 29271011 29271059 -173814473 - MLT1B LTR MaLR -336 54 7 * 568 246 0 0 chr5 29271056 29271178 -173814354 + MLT1B LTR MaLR 21 142 -248 886 213 91 15 chr5 29271179 29271442 -173814090 + MLT1B LTR MaLR 67 349 -41 477 0 0 0 chr5 29271981 29272034 -173813498 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 222 37 0 0 chr5 29272034 29272061 -173813471 + (GA)n Simple_repeat Simple_repeat 2 28 0 290 286 97 62 chr5 29272981 29273240 -173812292 + L2 LINE L2 1806 2073 -1241 329 300 30 0 chr5 29273264 29273364 -173812168 - LTR40a LTR ERVL -413 106 4 596 220 135 10 chr5 29274049 29274249 -173811283 - L1MC2 LINE L1 -98 6246 6022 * 6938 252 27 63 chr5 29274240 29275599 -173809933 - L1PA12 LINE L1 -2001 5583 4176 225 0 0 0 chr5 29275599 29275624 -173809908 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6938 252 27 63 chr5 29275624 29277824 -173807708 - L1PA12 LINE L1 -3408 4176 2176 588 382 0 13 chr5 29277816 29278041 -173807491 - L1PA12 LINE L1 -6564 1010 789 * 375 194 101 23 chr5 29278245 29278374 -173807158 - L1MCb LINE L1 -3214 3350 3212 2080 248 42 15 chr5 29278410 29278866 -173806666 - MER70B LTR ERVL -108 470 3 1512 266 28 10 chr5 29278870 29279371 -173806161 - L1MCb LINE L1 -3350 3214 2705 832 284 30 85 chr5 29279419 29279951 -173805581 - L1MCb LINE L1 -5540 505 3 223 338 92 44 chr5 29280192 29280420 -173805112 - MIR SINE MIR -6 256 18 182 116 23 0 chr5 29281392 29281435 -173804097 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr5 29282607 29282635 -173802897 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr5 29282705 29282751 -173802781 + AT_rich Low_complexity Low_complexity 1 46 0 527 219 22 44 chr5 29283219 29283356 -173802176 - LTR5 LTR ERVK -835 134 1 1363 240 116 24 chr5 29283356 29284388 -173801144 + L1MC3 LINE L1 1871 3001 -3425 1598 181 5 32 chr5 29284490 29284871 -173800661 - L1PA16 LINE L1 -592 5574 5204 2913 152 44 67 chr5 29284874 29285468 -173800064 + L1PA16 LINE L1 5581 6160 -6 1224 266 49 18 chr5 29285474 29285921 -173799611 + L1MC3 LINE L1 4670 5130 -1296 1042 200 46 72 chr5 29285934 29286279 -173799253 + L1MC3 LINE L1 5966 6301 -1764 313 264 123 43 chr5 29286303 29286466 -173799066 - L1M4 LINE L1 -3157 2989 2814 4800 209 35 63 chr5 29286506 29287886 -173797646 + L1MC3 LINE L1 6327 7668 -397 711 221 22 50 chr5 29287887 29288109 -173797423 + L1MC3 LINE L1 7819 8034 -31 1687 147 13 121 chr5 29288111 29288498 -173797034 - MER7A DNA MER2_type -1 345 3 23 0 0 0 chr5 29288837 29288860 -173796672 + AT_rich Low_complexity Low_complexity 1 23 0 2554 115 3 3 chr5 29289052 29289426 -173796106 + THE1C LTR MaLR 2 375 0 9592 146 28 5 chr5 29289426 29290970 -173794562 + THE1C-int LTR MaLR 1 1580 0 2465 99 16 37 chr5 29290970 29291352 -173794180 + THE1C LTR MaLR 1 374 -1 261 128 43 0 chr5 29292261 29292308 -173793224 + L1MC4 LINE L1 6652 6700 -1342 26 50 0 0 chr5 29292468 29292508 -173793024 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr5 29292738 29292767 -173792765 + AT_rich Low_complexity Low_complexity 1 29 0 3625 150 0 2 chr5 29293274 29293861 -173791671 - L1PA13 LINE L1 -11 6152 5567 5122 149 14 5 chr5 29293868 29295404 -173790128 + L1PA15 LINE L1 4619 6160 -5 5355 260 36 45 chr5 29295404 29298773 -173786759 - L1PA13 LINE L1 -2943 3854 1 321 125 0 18 chr5 29298781 29298837 -173786695 + L1MB7 LINE L1 6111 6165 -19 30 0 0 0 chr5 29299160 29299190 -173786342 + AT_rich Low_complexity Low_complexity 1 30 0 31 26 0 0 chr5 29299327 29299365 -173786167 + AT_rich Low_complexity Low_complexity 1 38 0 1650 208 19 19 chr5 29300588 29300953 -173784579 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr5 29301301 29301330 -173784202 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 29302082 29302124 -173783408 + AT_rich Low_complexity Low_complexity 1 42 0 1317 268 105 22 chr5 29303201 29303937 -173781595 - L1M4 LINE L1 -2260 3886 3090 23 0 0 0 chr5 29303976 29303999 -173781533 + AT_rich Low_complexity Low_complexity 1 23 0 1598 147 14 11 chr5 29304006 29304291 -173781241 - L1MA6 LINE L1 -5 6295 6010 2507 107 80 5 chr5 29304291 29304682 -173780850 + L1PA11 LINE L1 5743 6174 0 1392 266 49 4 chr5 29304690 29305156 -173780376 + L1MB8 LINE L1 3569 4055 -2091 * 1728 226 68 3 chr5 29305145 29305672 -173779860 + L1MB8 LINE L1 5513 6117 -67 358 261 139 35 chr5 29305682 29305797 -173779735 + MER5A DNA MER1_type 60 186 -3 333 310 0 120 chr5 29306040 29306240 -173779292 - MER5B DNA MER1_type -1 177 2 257 254 197 0 chr5 29306548 29306619 -173778913 - L2 LINE L2 -30 3242 3158 325 291 156 7 chr5 29307014 29307155 -173778377 - MER5B DNA MER1_type -16 162 1 213 259 51 134 chr5 29307652 29307830 -173777702 - L2 LINE L2 -10 3303 3112 1955 117 7 3 chr5 29307830 29308143 -173777389 + AluSp SINE Alu 1 314 0 213 259 51 134 chr5 29308143 29308234 -173777298 - L2 LINE L2 -201 3112 3064 2102 101 14 3 chr5 29308234 29308531 -173777001 + AluSc SINE Alu 1 300 -9 213 259 51 134 chr5 29308531 29308595 -173776937 - L2 LINE L2 -249 3064 2996 623 278 55 3 chr5 29309480 29309771 -173775761 + Charlie4a DNA MER1_type 77 382 -126 31 44 0 0 chr5 29310090 29310135 -173775397 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr5 29310766 29310801 -173774731 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 29311003 29311034 -173774498 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr5 29311292 29311329 -173774203 + AT_rich Low_complexity Low_complexity 1 37 0 680 285 61 20 chr5 29311755 29312001 -173773531 + MIR SINE MIR 7 262 0 21 82 0 0 chr5 29312807 29312856 -173772676 + AT_rich Low_complexity Low_complexity 1 49 0 24 53 0 0 chr5 29314890 29314928 -173770604 + AT_rich Low_complexity Low_complexity 1 38 0 888 192 158 0 chr5 29315960 29316163 -173769369 - MER46A DNA MER2_type -1 235 1 219 242 0 0 chr5 29316295 29316357 -173769175 + (TA)n Simple_repeat Simple_repeat 1 62 0 1439 265 25 92 chr5 29316664 29317295 -173768237 + MLT1E LTR MaLR 1 589 -4 776 165 88 29 chr5 29317561 29317823 -173767709 + MER44D DNA MER2_type 2 517 -92 1135 184 43 4 chr5 29317826 29318060 -173767472 - Tigger2a DNA MER2_type 0 444 202 534 175 62 0 chr5 29318061 29318158 -173767374 + AluSq/x SINE Alu 3 105 -208 951 212 13 42 chr5 29318216 29318452 -173767080 - Tigger2a DNA MER2_type -205 229 1 382 237 66 0 chr5 29318452 29318527 -173767005 + MER44D DNA MER2_type 523 602 -7 240 86 0 0 chr5 29318646 29318681 -173766851 + (TC)n Simple_repeat Simple_repeat 1 35 0 24 85 0 0 chr5 29318897 29318956 -173766576 + AT_rich Low_complexity Low_complexity 1 59 0 207 94 38 19 chr5 29318958 29319011 -173766521 + A-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr5 29319011 29319037 -173766495 + AT_rich Low_complexity Low_complexity 1 26 0 636 244 2 5 chr5 29319037 29319229 -173766303 + L1MB5 LINE L1 5660 5849 -325 21 36 0 0 chr5 29319231 29319259 -173766273 + AT_rich Low_complexity Low_complexity 1 28 0 4032 189 33 9 chr5 29319453 29320836 -173764696 + L1PB4 LINE L1 4376 5791 -365 422 202 16 33 chr5 29320836 29321019 -173764513 + (TA)n Simple_repeat Simple_repeat 1 180 0 1731 182 62 0 chr5 29321062 29321403 -173764129 + L1PB4 LINE L1 5782 6143 -13 28 71 0 0 chr5 29321436 29321492 -173764040 + AT_rich Low_complexity Low_complexity 1 56 0 2245 60 0 18 chr5 29321846 29322130 -173763402 + AluY SINE Alu 1 279 -32 360 0 0 0 chr5 29322130 29322170 -173763362 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1187 211 19 0 chr5 29322184 29322444 -173763088 + L1MA9 LINE L1 6010 6274 -38 28 0 0 0 chr5 29322444 29322472 -173763060 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 29323127 29323149 -173762383 + AT_rich Low_complexity Low_complexity 1 22 0 315 336 17 9 chr5 29324069 29324185 -173761347 + MIR3 SINE MIR 87 203 -5 26 0 0 0 chr5 29324696 29324722 -173760810 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 29324788 29324809 -173760723 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr5 29325375 29325404 -173760128 + (TA)n Simple_repeat Simple_repeat 2 30 0 717 312 66 45 chr5 29325905 29326479 -173759053 - ERVL LTR ERVL -102 5662 5077 1864 102 18 21 chr5 29326492 29326775 -173758757 + AluSx SINE Alu 29 310 -2 1005 293 43 29 chr5 29326822 29327538 -173757994 - ERVL LTR ERVL -932 4832 4053 709 261 118 62 chr5 29328821 29329227 -173756305 + MLT1E2 LTR MaLR 21 449 -177 12475 237 34 17 chr5 29330955 29333502 -173752030 - L1PA16 LINE L1 -9 7595 5092 1575 105 18 0 chr5 29333502 29333751 -173751781 - AluY SINE Alu 0 315 63 12475 237 34 17 chr5 29333751 29334053 -173751479 - L1PA16 LINE L1 -2512 5092 4797 341 22 22 0 chr5 29334053 29334099 -173751433 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 12475 237 34 17 chr5 29334099 29336518 -173749014 - L1PA16 LINE L1 -2807 4797 2197 296 320 0 0 chr5 29336765 29336862 -173748670 - L1PA16 LINE L1 -5400 2181 2085 574 330 33 48 chr5 29336916 29337456 -173748076 - L1PA16 LINE L1 -6167 1407 876 284 222 69 0 chr5 29337570 29337642 -173747890 - MIR SINE MIR -110 152 76 24 96 0 0 chr5 29337970 29338043 -173747489 + AT_rich Low_complexity Low_complexity 1 73 0 22 70 0 0 chr5 29338888 29338931 -173746601 + AT_rich Low_complexity Low_complexity 1 43 0 1648 138 78 67 chr5 29342343 29342714 -173742818 - THE1C LTR MaLR 0 375 1 1483 301 87 15 chr5 29342864 29343448 -173742084 - MLT1E2 LTR MaLR 0 626 1 281 257 134 34 chr5 29343989 29344168 -173741364 - MIR SINE MIR 0 262 66 356 268 71 42 chr5 29344900 29345068 -173740464 - MLT1J2 LTR MaLR 0 450 278 405 301 98 20 chr5 29345417 29345570 -173739962 + Charlie1 DNA MER1_type 7 171 -2590 305 314 17 0 chr5 29345603 29345721 -173739811 + Charlie1 DNA MER1_type 2637 2756 -5 21 89 0 0 chr5 29345775 29345831 -173739701 + AT_rich Low_complexity Low_complexity 1 56 0 3946 164 25 31 chr5 29346035 29346839 -173738693 - Tigger3b DNA MER2_type 0 1231 433 1791 174 81 0 chr5 29346818 29347151 -173738381 - Tigger3b DNA MER2_type -869 362 3 * 215 215 28 9 chr5 29347163 29347270 -173738262 + (TA)n Simple_repeat Simple_repeat 1 109 0 1587 299 119 27 chr5 29347271 29349795 -173735737 + L1ME2 LINE L1 1306 4019 -2196 734 258 219 7 chr5 29349862 29350319 -173735213 + L1ME2 LINE L1 4864 5417 -798 305 283 22 0 chr5 29350333 29350425 -173735107 + L1ME2 LINE L1 5450 5543 -704 452 261 23 28 chr5 29350482 29350658 -173734874 + L1ME2 LINE L1 5905 6079 -154 213 94 0 0 chr5 29350828 29350860 -173734672 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2919 176 96 20 chr5 29351084 29351744 -173733788 - MER67C LTR ERV1 0 710 1 378 269 10 10 chr5 29351888 29351992 -173733540 + L1MC2 LINE L1 6239 6342 -2 11364 138 15 19 chr5 29452371 29454255 -173631277 - L1P LINE L1 -4260 1886 11 32 42 0 42 chr5 29454525 29454597 -173630935 + AT_rich Low_complexity Low_complexity 1 69 0 985 240 62 120 chr5 29454602 29454876 -173630656 - L1ME3A LINE L1 -56 6114 5826 1814 148 140 8 chr5 29454876 29455254 -173630278 + MSTA LTR MaLR 1 428 0 985 240 62 120 chr5 29455254 29455870 -173629662 - L1ME3A LINE L1 -344 5826 5261 1050 205 19 0 chr5 29456031 29456236 -173629296 + MER2 DNA MER2_type 1 209 -136 333 334 125 26 chr5 29456354 29456665 -173628867 - L1ME3A LINE L1 -1046 5100 4759 25 31 0 0 chr5 29456705 29456737 -173628795 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 29457251 29457277 -173628255 + AT_rich Low_complexity Low_complexity 1 26 0 356 318 48 26 chr5 29457753 29457942 -173627590 + MIR SINE MIR 70 262 0 284 287 0 0 chr5 29460048 29460135 -173625397 + (TA)n Simple_repeat Simple_repeat 1 87 0 629 279 76 20 chr5 29460851 29460987 -173624545 - L1ME3A LINE L1 -78 6092 5965 1646 241 23 43 chr5 29460987 29461502 -173624030 + MLT1D LTR MaLR 1 505 0 629 279 76 20 chr5 29461502 29461666 -173623866 - L1ME3A LINE L1 -205 5965 5775 2678 145 40 36 chr5 29461713 29462230 -173623302 + MLT2A1 LTR ERVL 1 515 0 40142 95 13 3 chr5 29462230 29467836 -173617696 + HERVL-A1-A1 LTR ERVL 1 5654 0 3189 66 50 2 chr5 29467836 29468260 -173617272 + MLT2A1 LTR ERVL 1 444 0 263 247 58 11 chr5 29468406 29468520 -173617012 - L1ME3A LINE L1 -565 5599 5481 282 200 47 24 chr5 29468542 29468627 -173616905 - L1ME3A LINE L1 -667 5497 5411 555 220 86 42 chr5 29468653 29468962 -173616570 - L1ME3A LINE L1 -743 5403 5133 2345 85 13 3 chr5 29469643 29469950 -173615582 - AluSg SINE Alu 0 310 1 1075 163 15 0 chr5 29470144 29470340 -173615192 + L1MB1 LINE L1 5970 6168 0 31 26 0 0 chr5 29470430 29470468 -173615064 + AT_rich Low_complexity Low_complexity 1 38 0 230 300 12 0 chr5 29470960 29471040 -173614492 - MER103 DNA DNA -55 111 31 2493 204 63 87 chr5 29471135 29471856 -173613676 - L1MB8 LINE L1 -6 6172 5474 5307 16 13 3 chr5 29471856 29472489 -173613043 - L1PA2 LINE L1 -1 6154 5516 2493 204 63 87 chr5 29472489 29472652 -173612880 - L1MB8 LINE L1 -704 5474 5309 717 185 6 25 chr5 29472672 29472834 -173612698 - L1MB3 LINE L1 -3 6180 6022 6950 174 75 114 chr5 29472837 29473077 -173612455 - L1M4c LINE L1 -4222 2162 1914 798 163 0 15 chr5 29473077 29473212 -173612320 + FLAM_C SINE Alu 1 133 0 6950 174 75 114 chr5 29473212 29474249 -173611283 - L1M4c LINE L1 -4470 1914 867 692 156 52 22 chr5 29474249 29474384 -173611148 - AluJb SINE Alu -173 139 1 6950 174 75 114 chr5 29474384 29475201 -173610331 - L1M4c LINE L1 -5517 867 20 1199 255 24 14 chr5 29476202 29476571 -173608961 + L1MB8 LINE L1 5746 6118 -60 1687 162 73 20 chr5 29476632 29476733 -173608799 - L1MA8 LINE L1 -5 6286 6192 258 81 0 0 chr5 29476733 29476770 -173608762 + (TG)n Simple_repeat Simple_repeat 2 38 0 1687 162 73 20 chr5 29476770 29477445 -173608087 - L1MA8 LINE L1 -99 6192 5377 807 189 37 98 chr5 29477628 29477872 -173607660 - MLT1-int LTR MaLR -723 648 420 281 228 0 0 chr5 29478135 29478192 -173607340 + HERVL68 LTR ERVL 2724 2780 -257 2704 19 0 0 chr5 29478445 29478754 -173606778 + AluYa5 SINE Alu 1 309 -2 253 410 6 6 chr5 29478840 29479001 -173606531 - L2 LINE L2 -557 2757 2597 1515 134 0 0 chr5 29479553 29479769 -173605763 - AluSg/x SINE Alu -13 297 82 27 49 0 0 chr5 29480011 29480052 -173605480 + AT_rich Low_complexity Low_complexity 1 41 0 983 251 43 0 chr5 29480586 29480865 -173604667 - MER63 DNA MER1_type -11 1051 761 1656 174 10 84 chr5 29480882 29481285 -173604247 + MLT1B LTR MaLR 1 373 -17 2279 174 20 3 chr5 29481286 29481676 -173603856 - MSTA LTR MaLR 0 428 32 387 237 61 18 chr5 29481715 29481829 -173603703 - MER63 DNA MER1_type -91 745 1 1508 206 44 12 chr5 29482051 29482391 -173603141 - L1MA4 LINE L1 -21 6279 5929 1329 188 51 8 chr5 29482391 29482647 -173602885 + L1M1 LINE L1 5504 5770 -530 2575 33 3 0 chr5 29482653 29482956 -173602576 - AluY SINE Alu -7 304 1 1061 347 71 40 chr5 29484030 29484984 -173600548 + L2 LINE L2 2308 3300 -13 202 349 65 61 chr5 29485290 29485519 -173600013 - MIR SINE MIR -9 253 24 194 81 27 0 chr5 29485777 29485814 -173599718 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 303 283 22 0 chr5 29486587 29486679 -173598853 + L1M LINE L1 5295 5388 -774 248 371 21 10 chr5 29486982 29487079 -173598453 - MER91A DNA MER1_type -85 111 14 22 35 0 0 chr5 29488096 29488125 -173597407 + AT_rich Low_complexity Low_complexity 1 29 0 27 29 0 0 chr5 29488330 29488364 -173597168 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 29489521 29489551 -173595981 + AT_rich Low_complexity Low_complexity 1 30 0 288 228 43 33 chr5 29490740 29490832 -173594700 - MER5A DNA MER1_type -93 96 4 23 33 0 0 chr5 29491516 29491546 -173593986 + AT_rich Low_complexity Low_complexity 1 30 0 516 272 143 0 chr5 29492479 29492626 -173592906 - MIR SINE MIR -93 169 2 251 195 24 24 chr5 29492949 29493031 -173592501 + (TAGA)n Simple_repeat Simple_repeat 2 83 0 331 304 77 43 chr5 29493473 29493604 -173591928 - L1MEd LINE L1 -4750 1560 1435 2503 48 0 0 chr5 29493604 29493899 -173591633 - AluY SINE Alu -16 295 1 331 304 77 43 chr5 29493899 29494276 -173591256 - L1MEd LINE L1 -4875 1435 988 23 0 0 0 chr5 29495048 29495071 -173590461 + AT_rich Low_complexity Low_complexity 1 23 0 32 43 0 0 chr5 29495235 29495281 -173590251 + AT_rich Low_complexity Low_complexity 1 46 0 2053 125 0 0 chr5 29496646 29496927 -173588605 - AluSg SINE Alu -16 294 14 713 331 39 16 chr5 29500199 29500507 -173585025 - LTR16A1 LTR ERVL 0 457 143 189 276 103 52 chr5 29500733 29500849 -173584683 - L2 LINE L2 -1882 1432 1311 234 91 0 0 chr5 29500873 29500906 -173584626 + (CATA)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr5 29500907 29500928 -173584604 + (GA)n Simple_repeat Simple_repeat 2 22 0 958 231 0 42 chr5 29502152 29502416 -173583116 + L1MD1 LINE L1 5773 6025 -217 24 32 0 0 chr5 29504381 29504412 -173581120 + AT_rich Low_complexity Low_complexity 1 31 0 1891 139 147 21 chr5 29504573 29504953 -173580579 - MSTA LTR MaLR 0 428 1 4231 221 29 50 chr5 29504968 29505698 -173579834 - L1MC3 LINE L1 -189 7596 6901 183 80 0 0 chr5 29505698 29505723 -173579809 + (TG)n Simple_repeat Simple_repeat 2 26 0 4231 221 29 50 chr5 29505723 29506206 -173579326 - L1MC3 LINE L1 -884 6901 6409 288 116 0 0 chr5 29506206 29506249 -173579283 - MADE1 DNA Mariner 0 80 38 27 29 0 0 chr5 29506593 29506627 -173578905 + AT_rich Low_complexity Low_complexity 1 34 0 25 51 0 0 chr5 29506664 29506703 -173578829 + AT_rich Low_complexity Low_complexity 1 39 0 2263 61 3 10 chr5 29506824 29507117 -173578415 + AluY SINE Alu 17 307 -4 38 39 0 0 chr5 29507826 29507878 -173577654 + AT_rich Low_complexity Low_complexity 1 52 0 252 268 236 16 chr5 29508038 29508161 -173577371 + MIR SINE MIR 13 162 -100 1359 117 5 0 chr5 29508966 29509183 -173576349 - AluSg/x SINE Alu 0 303 86 21 36 0 0 chr5 29509466 29509494 -173576038 + AT_rich Low_complexity Low_complexity 1 28 0 1926 267 30 25 chr5 29509756 29510314 -173575218 - MLT1F1 LTR MaLR 0 567 7 279 287 41 107 chr5 29510321 29510638 -173574894 - MLT1F1-int LTR MaLR 0 1371 1076 412 263 168 36 chr5 29510732 29511006 -173574526 + L1ME1 LINE L1 4996 5305 -841 1552 106 38 4 chr5 29511009 29511246 -173574286 + AluSx SINE Alu 52 296 -16 981 284 48 44 chr5 29511405 29511863 -173573669 + L1ME1 LINE L1 5704 6163 -3 27 49 0 0 chr5 29512570 29512611 -173572921 + AT_rich Low_complexity Low_complexity 1 41 0 21 57 0 0 chr5 29513507 29513542 -173571990 + AT_rich Low_complexity Low_complexity 1 35 0 697 236 67 84 chr5 29513763 29514047 -173571485 + MER21B LTR ERV1 492 770 -93 2128 143 0 0 chr5 29514848 29515155 -173570377 - AluSx SINE Alu -5 307 1 1669 100 155 7 chr5 29515296 29515567 -173569965 + AluSx SINE Alu 1 311 -1 237 232 0 18 chr5 29518110 29518166 -173567366 + (CA)n Simple_repeat Simple_repeat 2 56 0 713 242 86 17 chr5 29518610 29518917 -173566615 - L1ME2 LINE L1 -19 6145 5815 416 211 13 122 chr5 29518923 29519079 -173566453 - L1MA9 LINE L1 0 6291 6153 240 35 0 0 chr5 29519246 29519275 -173566257 + (CA)n Simple_repeat Simple_repeat 2 30 0 556 297 128 23 chr5 29519313 29519741 -173565791 - L1ME2 LINE L1 -363 5801 5329 474 283 102 44 chr5 29519791 29520272 -173565260 - L1ME2 LINE L1 -891 5255 4747 * 1299 7 0 0 chr5 29520268 29520416 -173565116 - L1PA3 LINE L1 -1445 4701 4554 7481 36 0 0 chr5 29520416 29521862 -173563670 + L1PA3 LINE L1 4707 6152 -3 655 224 77 77 chr5 29521882 29522257 -173563275 - L1ME2 LINE L1 -1387 4759 4385 23 0 0 0 chr5 29522264 29522287 -173563245 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 29522366 29522389 -173563143 + AT_rich Low_complexity Low_complexity 1 23 0 428 321 158 3 chr5 29522686 29523022 -173562510 - L2 LINE L2 -1665 1649 1262 5728 120 5 2 chr5 29523030 29523897 -173561635 - L1PA13 LINE L1 -2 6161 5293 * 17571 220 27 9 chr5 29523887 29529134 -173556398 - L1P4 LINE L1 -645 6174 781 332 43 22 0 chr5 29529134 29529180 -173556352 + (CA)n Simple_repeat Simple_repeat 1 47 0 17571 220 27 9 chr5 29529180 29529910 -173555622 - L1P4 LINE L1 -6038 781 66 3861 97 20 46 chr5 29529917 29530523 -173555009 + LTR14B LTR ERVK 19 608 0 317 211 0 0 chr5 29530523 29530580 -173554952 - L1P4 LINE L1 -6730 57 1 4780 258 49 55 chr5 29531091 29531990 -173553542 + L1M4b LINE L1 33 936 -5923 480 61 0 0 chr5 29531990 29532056 -173553476 + L1PA6 LINE L1 6086 6151 -3 4780 258 49 55 chr5 29532056 29532230 -173553302 + L1M4b LINE L1 936 1110 -5749 180 0 0 0 chr5 29532230 29532250 -173553282 + (GA)n Simple_repeat Simple_repeat 1 20 0 4780 258 49 55 chr5 29532250 29532797 -173552735 + L1M4b LINE L1 1110 1644 -5215 683 243 28 0 chr5 29532798 29532979 -173552553 + L1M4b LINE L1 3395 3580 -3377 391 229 90 0 chr5 29532978 29533100 -173552432 - L1MB7 LINE L1 -242 5932 5800 * 230 169 85 0 chr5 29533193 29533252 -173552280 - L1MDb LINE L1 -4296 2350 2287 1451 222 63 122 chr5 29533274 29533677 -173551855 - L1MDb LINE L1 -4481 2165 1740 340 98 0 0 chr5 29533677 29533728 -173551804 - Alu SINE Alu 0 301 251 2095 83 0 21 chr5 29533728 29534016 -173551516 - AluSx SINE Alu -30 282 1 1451 222 63 122 chr5 29534016 29534387 -173551145 - L1MDb LINE L1 -4904 1742 1422 * 1708 234 56 63 chr5 29534382 29534972 -173550560 - L1MDb LINE L1 -5414 1128 543 1076 257 96 43 chr5 29535002 29535441 -173550091 - L1MDb LINE L1 -6071 471 10 2983 221 40 47 chr5 29535452 29535577 -173549955 + L1MB8 LINE L1 4848 4972 -1206 1999 101 22 4 chr5 29535577 29535854 -173549678 + AluSx SINE Alu 8 289 -23 2983 221 40 47 chr5 29535854 29536539 -173548993 + L1MB8 LINE L1 4972 5648 -530 1474 184 52 52 chr5 29536539 29536903 -173548629 + THE1B LTR MaLR 1 364 0 2983 221 40 47 chr5 29536903 29537419 -173548113 + L1MB8 LINE L1 5648 6166 -12 229 389 48 31 chr5 29537489 29537718 -173547814 + L2 LINE L2 2932 3164 -149 206 292 14 14 chr5 29537764 29537836 -173547696 + (TA)n Simple_repeat Simple_repeat 2 73 0 771 262 183 37 chr5 29539721 29540103 -173545429 - MLT1D LTR MaLR 0 505 68 363 313 90 30 chr5 29540502 29540668 -173544864 - MLT1C LTR MaLR 0 467 292 747 164 105 33 chr5 29540670 29540822 -173544710 + THE1B LTR MaLR 202 364 0 7210 288 28 34 chr5 29540822 29544005 -173541527 - L1PA12 LINE L1 -1590 5994 2828 2814 184 114 10 chr5 29544006 29544611 -173540921 + L1PA16 LINE L1 5495 6162 -4 304 287 65 70 chr5 29546134 29546364 -173539168 + Charlie8 DNA MER1_type 36 264 -2153 25 51 0 0 chr5 29547115 29547154 -173538378 + AT_rich Low_complexity Low_complexity 1 39 0 1038 229 67 80 chr5 29547687 29548062 -173537470 + MLT1A2 LTR MaLR 5 374 0 55 40 0 0 chr5 29549934 29550010 -173535522 + AT_rich Low_complexity Low_complexity 1 76 0 334 279 130 19 chr5 29550201 29550362 -173535170 + MIR SINE MIR 78 256 -6 1866 193 20 11 chr5 29550512 29550870 -173534662 + MLT1A1 LTR MaLR 1 361 -4 1231 182 12 43 chr5 29552229 29552482 -173533050 + AluJo SINE Alu 1 245 -67 2115 164 37 28 chr5 29552482 29553027 -173532505 - MLT2A2 LTR ERVL 0 554 1 272 179 18 0 chr5 29553027 29553083 -173532449 + FAM SINE Alu 116 172 -3 1215 269 82 65 chr5 29553778 29554336 -173531196 - MLT1E LTR MaLR -19 574 7 256 0 0 71 chr5 29555711 29555753 -173529779 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 628 264 140 13 chr5 29556273 29556508 -173529024 + MER45C DNA AcHobo 688 952 -1 1933 157 34 10 chr5 29556875 29557390 -173528142 + MLT2A2 LTR ERVL 1 554 0 21 57 0 0 chr5 29557856 29557891 -173527641 + AT_rich Low_complexity Low_complexity 1 35 0 384 346 39 0 chr5 29558242 29558369 -173527163 + MIR3 SINE MIR 65 196 -12 232 286 157 0 chr5 29558534 29558674 -173526858 + L1M4 LINE L1 3394 3555 -2591 1593 202 16 3 chr5 29558708 29559025 -173526507 - L1PA16 LINE L1 -17 6149 5829 5092 249 20 17 chr5 29559025 29560597 -173524935 - L1 LINE L1 -1819 4327 2752 3863 88 26 27 chr5 29560604 29561187 -173524345 - L1PA7 LINE L1 -8 6146 5565 1235 164 14 0 chr5 29561329 29561548 -173523984 - HERVH LTR ERV1 -4352 3361 3140 * 11051 138 6 34 chr5 29561527 29563456 -173522076 - HERVH LTR ERV1 -4718 2995 1122 8223 116 23 8 chr5 29563674 29565021 -173520511 + L1P LINE L1 2392 3758 -2388 510 281 79 6 chr5 29565022 29565200 -173520332 - L1 LINE L1 -3371 2775 2585 258 32 0 0 chr5 29565673 29565704 -173519828 + (TA)n Simple_repeat Simple_repeat 2 32 0 378 121 0 0 chr5 29566647 29566713 -173518819 + (GA)n Simple_repeat Simple_repeat 1 66 0 3309 153 50 31 chr5 29567246 29567926 -173517606 + L1MA7 LINE L1 5594 6286 -5 612 183 30 18 chr5 29568347 29568516 -173517016 - L1MC3 LINE L1 -2 7783 7613 468 313 99 45 chr5 29569679 29569992 -173515540 - LTR33 LTR ERVL -132 389 60 312 313 13 20 chr5 29570238 29570388 -173515144 - MERVL LTR ERVL -152 5333 5185 3165 184 46 79 chr5 29570761 29571134 -173514398 + L1MA5 LINE L1 5458 5842 -458 1853 56 0 0 chr5 29571134 29571364 -173514168 + L1PA5 LINE L1 5921 6154 0 3165 184 46 79 chr5 29571364 29571862 -173513670 + L1MA5 LINE L1 5842 6300 0 22 0 0 0 chr5 29572290 29572312 -173513220 + AT_rich Low_complexity Low_complexity 1 22 0 236 283 28 57 chr5 29572482 29572588 -173512944 + MIR SINE MIR 34 136 -126 656 298 41 24 chr5 29572641 29572957 -173512575 - MLT1A1 LTR MaLR -3 362 1 1017 164 35 0 chr5 29573111 29573282 -173512250 + AluJo SINE Alu 120 296 -16 21 0 0 0 chr5 29574952 29574973 -173510559 + AT_rich Low_complexity Low_complexity 1 21 0 2289 67 7 14 chr5 29575405 29575702 -173509830 + AluY SINE Alu 1 295 -16 23 78 0 0 chr5 29576208 29576259 -173509273 + AT_rich Low_complexity Low_complexity 1 51 0 27 0 0 0 chr5 29576977 29577004 -173508528 + AT_rich Low_complexity Low_complexity 1 27 0 22 80 0 0 chr5 29577804 29577854 -173507678 + AT_rich Low_complexity Low_complexity 1 50 0 436 16 33 0 chr5 29578057 29578118 -173507414 + (TA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 29578681 29578702 -173506830 + AT_rich Low_complexity Low_complexity 1 21 0 2266 121 8 5 chr5 29578962 29579333 -173506199 - L1P LINE L1 -3861 2285 1914 * 6511 92 1 4 chr5 29579329 29580243 -173505289 + L1P LINE L1 3758 4668 -1478 7356 42 0 1 chr5 29580243 29581968 -173503564 + L1PA3 LINE L1 4429 6152 -3 680 225 78 75 chr5 29581988 29582362 -173503170 - L1M4 LINE L1 -1387 4759 4385 23 0 0 0 chr5 29582369 29582392 -173503140 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 29582471 29582494 -173503038 + AT_rich Low_complexity Low_complexity 1 23 0 420 324 158 3 chr5 29582791 29583127 -173502405 - L2 LINE L2 -1665 1649 1262 5728 120 5 2 chr5 29583135 29584002 -173501530 - L1PA13 LINE L1 -2 6161 5293 * 6120 185 18 1 chr5 29583992 29585395 -173500137 - L1P4 LINE L1 -645 5838 4417 219 235 143 31 chr5 29587097 29587195 -173498337 + L2 LINE L2 3163 3271 -1 24 32 0 0 chr5 29587954 29587985 -173497547 + AT_rich Low_complexity Low_complexity 1 31 0 25 75 0 0 chr5 29589067 29589120 -173496412 + AT_rich Low_complexity Low_complexity 1 53 0 946 229 30 120 chr5 29589645 29590046 -173495486 - MLT1A1 LTR MaLR 0 365 1 589 256 176 24 chr5 29590408 29590748 -173494784 - MSTD LTR MaLR -4 392 1 899 256 5 19 chr5 29591499 29591710 -173493822 + MER58A DNA MER1_type 1 208 -16 619 229 0 0 chr5 29592196 29592318 -173493214 + AluJo/FLAM SINE Alu 1 122 -190 1647 100 11 38 chr5 29592318 29592579 -173492953 - AluY SINE Alu -14 297 44 29 0 0 0 chr5 29592886 29592915 -173492617 + AT_rich Low_complexity Low_complexity 1 29 0 2123 136 16 35 chr5 29593351 29593720 -173491812 - THE1B LTR MaLR 0 364 3 22 0 0 0 chr5 29594089 29594111 -173491421 + AT_rich Low_complexity Low_complexity 1 22 0 2487 132 0 19 chr5 29595873 29596291 -173489241 - L1P4 LINE L1 -3755 2706 2297 1183 174 0 5 chr5 29596296 29596497 -173489035 - L1P4 LINE L1 -6252 209 10 374 179 155 0 chr5 29596541 29596625 -173488907 + MER92A LTR ERV1 1 97 -315 282 257 0 0 chr5 29596806 29596880 -173488652 + MER92A LTR ERV1 339 412 0 180 0 0 0 chr5 29597181 29597201 -173488331 + (AAATG)n Simple_repeat Simple_repeat 4 23 0 341 252 111 22 chr5 29598921 29599056 -173486476 - MER110 LTR ERV1 -3 465 359 1957 143 26 52 chr5 29599117 29599502 -173486030 - THE1C LTR MaLR 0 375 1 2630 91 6 0 chr5 29599869 29600222 -173485310 - THE1A LTR MaLR 0 355 1 10805 106 5 23 chr5 29600224 29601814 -173483718 - THE1A-int LTR MaLR -19 1561 1 2573 108 3 0 chr5 29601814 29602166 -173483366 - THE1A LTR MaLR 0 355 3 687 298 44 46 chr5 29602449 29602838 -173482694 - MER110-int LTR ERV1 -282 4365 3978 327 274 16 32 chr5 29602837 29602961 -173482571 - MER110-int LTR ERV1 -1229 3418 3297 * 1689 169 31 41 chr5 29603496 29603887 -173481645 + MLT1B LTR MaLR 1 387 -3 251 326 33 49 chr5 29603968 29604152 -173481380 - ERVL LTR ERVL -2266 3498 3318 356 326 81 8 chr5 29604166 29604402 -173481130 - L1ME3A LINE L1 -260 5910 5658 1912 150 33 19 chr5 29604414 29604773 -173480759 + THE1B LTR MaLR 1 364 0 5094 132 14 3 chr5 29604773 29605542 -173479990 + THE1B-int LTR MaLR 1 781 -799 1381 263 36 80 chr5 29605542 29606182 -173479350 + LTR9 LTR ERV1 1 612 0 316 206 59 0 chr5 29606216 29606284 -173479248 + HUERS-P3 LTR ERV1 25 96 -7322 * 1295 228 14 24 chr5 29606277 29606571 -173478961 + HUERS-P3 LTR ERV1 244 534 -6884 5316 173 92 47 chr5 29606589 29607286 -173478246 + HUERS-P3 LTR ERV1 749 1413 -6896 188 261 109 0 chr5 29607286 29607378 -173478154 - MER5C DNA MER1_type -222 102 1 5316 173 92 47 chr5 29607378 29607419 -173478113 + HUERS-P3 LTR ERV1 1413 1451 -6858 360 0 0 0 chr5 29607419 29607459 -173478073 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 5316 173 92 47 chr5 29607459 29608510 -173477022 + HUERS-P3 LTR ERV1 1451 2995 -5314 686 182 10 76 chr5 29608508 29608706 -173476826 + MER83B-int LTR ERV1 2388 4320 -560 * 1004 243 35 52 chr5 29608963 29609309 -173476223 + LTR9 LTR ERV1 273 612 0 5443 130 9 2 chr5 29609309 29610110 -173475422 + THE1B-int LTR MaLR 775 1580 0 2010 164 22 27 chr5 29610110 29610476 -173475056 + THE1B LTR MaLR 1 364 0 631 248 60 41 chr5 29610476 29610844 -173474688 - L1ME3A LINE L1 -520 5650 5276 21 0 0 0 chr5 29611040 29611061 -173474471 + AT_rich Low_complexity Low_complexity 1 21 0 710 127 35 12 chr5 29611136 29611309 -173474223 + GA-rich Low_complexity Low_complexity 4 180 0 234 220 0 0 chr5 29611347 29611406 -173474126 + GA-rich Low_complexity Low_complexity 1 59 0 219 291 29 58 chr5 29611410 29611513 -173474019 + L2 LINE L2 2395 2494 -820 458 255 137 63 chr5 29611737 29612008 -173473524 + L2 LINE L2 3015 3305 -8 338 324 28 28 chr5 29613254 29613430 -173472102 + MIR SINE MIR 23 198 -64 241 318 0 0 chr5 29614217 29614280 -173471252 - L2 LINE L2 0 3313 3251 545 317 102 20 chr5 29614469 29614762 -173470770 - L2 LINE L2 -366 2948 2632 219 277 182 19 chr5 29615101 29615260 -173470272 + MIR SINE MIR 65 249 -13 207 283 81 20 chr5 29615300 29615399 -173470133 - L2 LINE L2 -681 2633 2529 360 0 0 0 chr5 29615401 29615441 -173470091 + (TA)n Simple_repeat Simple_repeat 2 41 0 203 152 0 0 chr5 29616196 29616229 -173469303 + T-rich Low_complexity Low_complexity 4 36 0 1020 219 85 54 chr5 29616421 29616773 -173468759 + MLT1A1 LTR MaLR 3 365 0 21 82 0 0 chr5 29618377 29618426 -173467106 + AT_rich Low_complexity Low_complexity 1 49 0 954 345 106 26 chr5 29618567 29618872 -173466660 - L2 LINE L2 -171 3142 2863 1717 128 37 10 chr5 29618872 29619168 -173466364 + AluSx SINE Alu 1 304 -8 954 345 106 26 chr5 29619168 29619673 -173465859 - L2 LINE L2 -450 2863 2260 5899 251 62 54 chr5 29621339 29622824 -173462708 + L1M3e LINE L1 10 1482 -5624 2402 129 3 6 chr5 29622824 29623189 -173462343 - THE1B LTR MaLR 0 364 1 5899 251 62 54 chr5 29623189 29624229 -173461303 + L1M3e LINE L1 1482 3216 -3890 * 6815 216 48 14 chr5 29624223 29626043 -173459489 + L1M3e LINE L1 3111 4992 -2114 21 71 0 0 chr5 29626498 29626540 -173458992 + AT_rich Low_complexity Low_complexity 1 42 0 1546 282 50 49 chr5 29629522 29630573 -173454959 - L1ME LINE L1 -504 5662 4619 2147 53 50 27 chr5 29630573 29630874 -173454658 + AluY SINE Alu 1 308 -3 1546 282 50 49 chr5 29630874 29631029 -173454503 - L1ME LINE L1 -1547 4619 4466 285 68 17 34 chr5 29631097 29631156 -173454376 + (TA)n Simple_repeat Simple_repeat 1 58 0 * 360 0 0 0 chr5 29631155 29631195 -173454337 + (GA)n Simple_repeat Simple_repeat 2 41 0 519 220 0 0 chr5 29631195 29631286 -173454246 - FLAM_A SINE Alu -36 106 16 433 270 104 24 chr5 29631341 29631552 -173453980 - L1ME LINE L1 -1774 4372 4145 548 365 180 15 chr5 29632035 29632898 -173452634 - L2 LINE L2 -473 2841 1837 609 149 0 0 chr5 29633150 29633244 -173452288 - AluS SINE Alu -218 94 1 35 71 0 0 chr5 29633553 29633623 -173451909 + AT_rich Low_complexity Low_complexity 1 70 0 304 385 86 20 chr5 29635614 29636112 -173449420 - L2 LINE L2 -2116 1198 668 181 0 0 65 chr5 29636168 29636199 -173449333 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 191 353 49 43 chr5 29636348 29636532 -173449000 - L2 LINE L2 -2831 483 299 519 322 33 11 chr5 29637340 29637523 -173448009 - MER5A DNA MER1_type -2 187 1 1778 177 5 39 chr5 29637633 29638045 -173447487 - L1 LINE L1 -1603 4543 4146 693 186 88 44 chr5 29638339 29638543 -173446989 + LTR7 LTR ERV1 238 450 0 569 269 57 26 chr5 29639329 29639522 -173446010 + MIR SINE MIR 18 216 -46 246 284 37 0 chr5 29639634 29639743 -173445789 + (TA)n Simple_repeat Simple_repeat 2 114 0 844 261 61 63 chr5 29639832 29639889 -173445643 - MER92A LTR ERV1 0 412 356 1952 150 51 23 chr5 29639889 29640243 -173445289 - THE1B LTR MaLR 0 364 1 10869 111 10 6 chr5 29640243 29641816 -173443716 - THE1B-int LTR MaLR 0 1580 1 2082 145 48 20 chr5 29641818 29642170 -173443362 - THE1B LTR MaLR -2 362 1 844 261 61 63 chr5 29642170 29642518 -173443014 - MER92A LTR ERV1 -56 356 4 24 0 0 0 chr5 29642785 29642809 -173442723 + AT_rich Low_complexity Low_complexity 1 24 0 209 222 0 0 chr5 29643116 29643161 -173442371 + (TA)n Simple_repeat Simple_repeat 1 45 0 200 228 18 0 chr5 29643556 29643613 -173441919 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 296 188 14 0 chr5 29644004 29644073 -173441459 + (TA)n Simple_repeat Simple_repeat 2 71 0 1543 204 127 32 chr5 29644073 29644505 -173441027 - MLT2B2 LTR ERVL -40 475 3 23 0 0 0 chr5 29644626 29644649 -173440883 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 29645202 29645226 -173440306 + AT_rich Low_complexity Low_complexity 1 24 0 239 325 0 8 chr5 29645357 29645474 -173440058 + (TA)n Simple_repeat Simple_repeat 2 117 0 328 320 0 0 chr5 29646421 29646524 -173439008 + MER103 DNA DNA 3 105 -61 23 0 0 0 chr5 29646727 29646750 -173438782 + AT_rich Low_complexity Low_complexity 1 23 0 601 239 5 46 chr5 29646767 29646964 -173438568 - L1MC3 LINE L1 -1 7784 7596 410 192 0 0 chr5 29647003 29647081 -173438451 - L1MC3 LINE L1 -923 6862 6785 189 0 0 0 chr5 29647135 29647156 -173438376 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 29647948 29647976 -173437556 + AT_rich Low_complexity Low_complexity 1 28 0 383 235 25 17 chr5 29648354 29648473 -173437059 - L1MA10 LINE L1 -2 6332 6213 1394 186 28 28 chr5 29648494 29648704 -173436828 - MLT1B LTR MaLR 0 390 178 2782 105 84 0 chr5 29648704 29649122 -173436410 - MLT2A2 LTR ERVL 0 453 1 1394 186 28 28 chr5 29649122 29649202 -173436330 - MLT1B LTR MaLR -211 179 100 1721 117 0 0 chr5 29649220 29649460 -173436072 - AluSg/x SINE Alu 0 310 71 326 67 0 22 chr5 29649460 29649505 -173436027 + AluS SINE Alu 23 66 -237 297 148 22 237 chr5 29649498 29649570 -173435962 - MLT1B LTR MaLR -284 106 75 * 1948 124 3 16 chr5 29649570 29649876 -173435656 + AluSq SINE Alu 1 302 -11 297 148 22 237 chr5 29649876 29649938 -173435594 - MLT1B LTR MaLR -315 75 1 1780 246 107 17 chr5 29649969 29650906 -173434626 - L1ME1 LINE L1 -161 6005 4991 5334 8 2 0 chr5 29650916 29651540 -173433992 + L1PA2 LINE L1 5544 6168 0 6356 231 50 7 chr5 29652224 29655185 -173430347 + L1PA13 LINE L1 1 3148 -3649 354 258 194 31 chr5 29656475 29656781 -173428751 - MLT1E LTR MaLR 0 542 101 1857 243 67 2 chr5 29657807 29658297 -173427235 + L1M4 LINE L1 3623 4144 -2002 2552 200 6 30 chr5 29658314 29658808 -173426724 + MLT2B3 LTR ERVL 47 528 -26 2648 238 66 23 chr5 29658814 29659689 -173425843 + L1M4 LINE L1 4172 5084 -1062 189 0 0 0 chr5 29660211 29660232 -173425300 + (GA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 29660238 29660259 -173425273 + AT_rich Low_complexity Low_complexity 1 21 0 1515 119 0 0 chr5 29660820 29661038 -173424494 + AluSx SINE Alu 1 218 -94 1894 144 6 16 chr5 29661935 29662247 -173423285 + AluSc SINE Alu 1 309 0 1935 141 0 3 chr5 29662260 29662544 -173422988 + AluSx SINE Alu 4 286 -26 290 245 49 10 chr5 29662592 29662694 -173422838 - L1ME4a LINE L1 -60 6061 5956 4802 107 92 120 chr5 29662747 29662762 -173422770 - pTR5 LTR ERV1 0 2438 2424 765 94 51 0 chr5 29662762 29662879 -173422653 - L1PA15 LINE L1 -4 6161 6039 4802 107 92 120 chr5 29662879 29664459 -173421073 - pTR5 LTR ERV1 -14 2424 136 2073 120 19 0 chr5 29664459 29664775 -173420757 - L1PA15 LINE L1 -121 6044 5723 24 0 0 0 chr5 29665551 29665575 -173419957 + AT_rich Low_complexity Low_complexity 1 24 0 4910 252 45 17 chr5 29666716 29668932 -173416600 - L1MB8 LINE L1 -2 6176 3860 3560 211 107 106 chr5 29668934 29670684 -173414848 + MER52A LTR ERV1 1 1751 -4 1318 251 44 32 chr5 29670690 29671187 -173414345 - L1MB8 LINE L1 -2299 3847 3345 32 86 0 0 chr5 29671208 29671289 -173414243 + AT_rich Low_complexity Low_complexity 1 81 0 258 307 33 43 chr5 29671331 29671634 -173413898 - L1M4 LINE L1 -2260 3886 3587 246 158 0 0 chr5 29672005 29672043 -173413489 - L1 LINE L1 -2475 3671 3634 22 35 0 0 chr5 29672201 29672230 -173413302 + AT_rich Low_complexity Low_complexity 1 29 0 1407 58 0 0 chr5 29672577 29672751 -173412781 - AluY SINE Alu 0 311 138 2023 298 100 22 chr5 29673698 29674609 -173410923 + L2 LINE L2 1716 2697 -617 2042 172 3 0 chr5 29674609 29674946 -173410586 - MER6A DNA MER2_type -267 338 1 1031 172 113 0 chr5 29674946 29675149 -173410383 - L1MC2 LINE L1 -421 5923 5698 498 380 22 47 chr5 29675156 29675480 -173410052 + L2 LINE L2 2722 3038 -275 434 360 66 4 chr5 29676119 29676361 -173409171 + MIR SINE MIR 5 261 -1 238 156 0 0 chr5 29676368 29676417 -173409115 - MLT2B2 LTR ERVL 0 520 480 251 232 0 0 chr5 29676431 29676487 -173409045 + (TA)n Simple_repeat Simple_repeat 2 57 0 201 121 0 0 chr5 29676499 29676532 -173409000 + (TG)n Simple_repeat Simple_repeat 2 34 0 378 0 0 0 chr5 29676532 29676574 -173408958 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 1605 193 145 22 chr5 29676574 29676974 -173408558 - MLT2B2 LTR ERVL -66 449 1 28 29 0 0 chr5 29677504 29677539 -173407993 + AT_rich Low_complexity Low_complexity 1 35 0 295 100 0 0 chr5 29678276 29678326 -173407206 - L1PA4 LINE L1 0 6155 6106 214 257 38 19 chr5 29679217 29679322 -173406210 + (TATG)n Simple_repeat Simple_repeat 2 108 0 2239 116 3 0 chr5 29679662 29679973 -173405559 - AluSx SINE Alu 0 312 1 239 300 14 14 chr5 29680196 29680266 -173405266 - L2 LINE L2 0 3272 3203 23 33 0 0 chr5 29681085 29681115 -173404417 + AT_rich Low_complexity Low_complexity 1 30 0 25 75 0 0 chr5 29681216 29681269 -173404263 + AT_rich Low_complexity Low_complexity 1 53 0 312 222 27 54 chr5 29731550 29731735 -173353797 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 808 230 86 3 chr5 29731735 29732039 -173353493 - L1MDa LINE L1 -4203 2337 2009 24 77 0 0 chr5 29732272 29732324 -173353208 + AT_rich Low_complexity Low_complexity 1 52 0 501 378 95 17 chr5 29732414 29732835 -173352697 + L2 LINE L2 2225 2678 -636 183 42 0 0 chr5 29732924 29732948 -173352584 + (TC)n Simple_repeat Simple_repeat 2 25 0 551 268 131 16 chr5 29732961 29733275 -173352257 - MER69 DNA AcHobo -19 2507 2158 767 324 54 4 chr5 29733373 29733651 -173351881 - MER69 DNA AcHobo -584 642 351 388 91 30 0 chr5 29734159 29734225 -173351307 + CT-rich Low_complexity Low_complexity 3 70 0 244 246 16 0 chr5 29734461 29734522 -173351010 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 29734771 29734812 -173350720 + AT_rich Low_complexity Low_complexity 1 41 0 265 347 38 20 chr5 29735417 29735585 -173349947 + MIR SINE MIR 42 212 -50 263 339 0 11 chr5 29735630 29735807 -173349725 + (CATA)n Simple_repeat Simple_repeat 2 176 0 2066 154 5 29 chr5 29736071 29736453 -173349079 - THE1C LTR MaLR -2 373 1 710 273 27 36 chr5 29736737 29737067 -173348465 - HAL1b LINE L1 -805 543 217 21 36 0 0 chr5 29737081 29737109 -173348423 + AT_rich Low_complexity Low_complexity 1 28 0 210 71 0 0 chr5 29737189 29737217 -173348315 + (TC)n Simple_repeat Simple_repeat 2 29 0 29 28 0 0 chr5 29737833 29737869 -173347663 + AT_rich Low_complexity Low_complexity 1 36 0 318 312 145 17 chr5 29738909 29738982 -173346550 + L1ME3A LINE L1 5633 5695 -475 1436 206 21 14 chr5 29738982 29739273 -173346259 + AluJo SINE Alu 1 293 -19 318 312 145 17 chr5 29739273 29739433 -173346099 + L1ME3A LINE L1 5695 5896 -274 581 213 7 29 chr5 29739555 29739691 -173345841 + AluJo SINE Alu 66 198 -114 22 0 0 0 chr5 29740466 29740488 -173345044 + AT_rich Low_complexity Low_complexity 1 22 0 882 118 31 9 chr5 29740853 29741082 -173344450 + CT-rich Low_complexity Low_complexity 1 233 0 228 211 0 0 chr5 29741082 29741120 -173344412 + polypyrimidine Low_complexity Low_complexity 2 39 0 341 121 84 108 chr5 29741220 29741303 -173344229 - MER51D LTR ERV1 -77 580 500 689 268 69 90 chr5 29742050 29742335 -173343197 + L1MC4a LINE L1 6616 6906 -1055 2075 131 0 20 chr5 29742335 29742641 -173342891 + AluSg SINE Alu 1 300 -10 689 268 69 90 chr5 29742641 29742986 -173342546 + L1MC4a LINE L1 6906 7238 -723 512 287 84 43 chr5 29743129 29743523 -173342009 + L1MC5 LINE L1 7277 7686 -275 180 301 75 32 chr5 29744473 29744566 -173340966 + L2 LINE L2 3203 3299 -14 304 169 15 0 chr5 29745200 29745265 -173340267 - MER116 DNA Mariner -1 79 14 26 74 0 0 chr5 29745792 29745846 -173339686 + AT_rich Low_complexity Low_complexity 1 54 0 27 0 0 0 chr5 29746101 29746128 -173339404 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr5 29746752 29746777 -173338755 + AT_rich Low_complexity Low_complexity 1 25 0 300 286 86 51 chr5 29747167 29747401 -173338131 - HAL1 LINE L1 -1 2506 2265 1397 143 0 9 chr5 29747552 29747762 -173337770 - AluSx SINE Alu -66 246 39 1819 142 0 11 chr5 29748491 29748765 -173336767 + AluSx SINE Alu 1 271 -41 205 167 42 0 chr5 29748773 29748821 -173336711 + T-rich Low_complexity Low_complexity 2 51 0 1252 176 51 62 chr5 29749544 29749923 -173335609 - MER67C LTR ERV1 -242 272 1 3119 227 68 58 chr5 29750176 29750548 -173334984 - L1MD1 LINE L1 0 6636 6269 2272 97 0 13 chr5 29750548 29750859 -173334673 - AluSc SINE Alu -2 307 1 3119 227 68 58 chr5 29750859 29752150 -173333382 - L1MD1 LINE L1 -367 6269 4946 1789 177 36 33 chr5 29752159 29752212 -173333320 + MLT1B LTR MaLR 1 52 -338 2393 107 19 16 chr5 29752212 29752575 -173332957 + THE1B LTR MaLR 1 364 0 1789 177 36 33 chr5 29752575 29752910 -173332622 + MLT1B LTR MaLR 52 390 0 3553 255 90 57 chr5 29752915 29753360 -173332172 - L1MD1 LINE L1 -1607 4933 4504 654 12 0 24 chr5 29753360 29753444 -173332088 + L1PA6 LINE L1 6070 6151 -3 3553 255 90 57 chr5 29753444 29753965 -173331567 - L1MD1 LINE L1 -2036 4504 4002 1956 100 3 91 chr5 29753965 29754294 -173331238 + AluSp SINE Alu 4 303 -10 3553 255 90 57 chr5 29754294 29754755 -173330777 - L1MD1 LINE L1 -2538 4002 3558 881 166 39 34 chr5 29754755 29754960 -173330572 - L1MA3 LINE L1 -2 6303 6098 3553 255 90 57 chr5 29754960 29756061 -173329471 - L1MD1 LINE L1 -2982 3558 2326 291 154 40 20 chr5 29756062 29756211 -173329321 + (TA)n Simple_repeat Simple_repeat 1 152 0 201 126 28 70 chr5 29756189 29756332 -173329200 + (TTATA)n Simple_repeat Simple_repeat 3 139 0 * 27 92 0 0 chr5 29756333 29756409 -173329123 + AT_rich Low_complexity Low_complexity 1 76 0 244 162 40 75 chr5 29756410 29756583 -173328949 + (TATAA)n Simple_repeat Simple_repeat 3 169 0 1181 238 5 68 chr5 29757123 29757493 -173328039 + MLT2C1 LTR ERVL 3 349 -48 210 203 0 51 chr5 29757493 29757552 -173327980 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 1045 270 109 55 chr5 29757616 29758238 -173327294 - L1MC4 LINE L1 -143 7899 7244 689 222 30 15 chr5 29758242 29758440 -173327092 - L1MC4 LINE L1 -952 7090 6890 686 214 12 18 chr5 29758543 29758711 -173326821 - L1MB8 LINE L1 -6 6172 6006 230 164 0 49 chr5 29758718 29758779 -173326753 - L1MB8 LINE L1 -506 5668 5611 1209 194 24 10 chr5 29758802 29759090 -173326442 + L1MB8 LINE L1 5611 5902 -276 1679 161 37 7 chr5 29759091 29759509 -173326023 + L1M2 LINE L1 5148 5574 -717 6614 65 1 1 chr5 29759555 29761044 -173324488 - L1PA5 LINE L1 0 6154 4690 1659 70 0 0 chr5 29761044 29761259 -173324273 + L1PA5 LINE L1 4445 4659 -1487 469 302 37 55 chr5 29761434 29761823 -173323709 + ERVL LTR ERVL 1940 2365 -2864 302 326 36 7 chr5 29762077 29762215 -173323317 + ERVL LTR ERVL 2692 2833 -2163 350 380 62 7 chr5 29762378 29762828 -173322704 + ERVL LTR ERVL 3068 3542 -2112 262 267 50 0 chr5 29763723 29763824 -173321708 - HAL1b LINE L1 -257 1091 986 1221 131 0 6 chr5 29763944 29764120 -173321412 - AluSg/x SINE Alu -49 261 87 370 116 43 43 chr5 29764121 29764190 -173321342 + AluS SINE Alu 9 77 -226 796 59 37 15 chr5 29764255 29764391 -173321141 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 631 301 86 46 chr5 29764530 29765028 -173320504 - HAL1b LINE L1 -741 607 90 1841 135 0 0 chr5 29765429 29765754 -173319778 + AluSx SINE Alu 3 327 0 190 54 27 27 chr5 29765754 29765791 -173319741 + (TA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr5 29767158 29767179 -173318353 + AT_rich Low_complexity Low_complexity 1 21 0 2132 100 0 0 chr5 29768384 29768665 -173316867 + AluY SINE Alu 1 307 0 235 0 0 0 chr5 29768665 29768691 -173316841 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2219 229 10 22 chr5 29768874 29769380 -173316152 - LTR31 LTR ERV1 -16 603 104 23 33 0 0 chr5 29769786 29769816 -173315716 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 29770237 29770270 -173315262 + AT_rich Low_complexity Low_complexity 1 33 0 842 234 12 6 chr5 29770379 29770550 -173314982 + MER45A DNA AcHobo 7 178 0 1384 208 0 41 chr5 29771592 29771921 -173313611 + AluJo SINE Alu 1 317 0 340 354 67 67 chr5 29772180 29772703 -173312829 + L2 LINE L2 2452 2974 -340 1329 137 19 5 chr5 29773263 29773468 -173312064 - AluSg/x SINE Alu -14 298 91 769 176 0 8 chr5 29773482 29773613 -173311919 - FLAM_C SINE Alu -3 130 1 710 191 66 0 chr5 29774100 29774252 -173311280 - MLT1A1 LTR MaLR 0 365 204 1195 159 0 0 chr5 29774384 29774566 -173310966 - AluSg/x SINE Alu -13 299 118 866 200 34 11 chr5 29774598 29774773 -173310759 - MLT1A1 LTR MaLR -183 182 4 1921 163 0 7 chr5 29774975 29775281 -173310251 - AluSx SINE Alu -8 304 1 815 278 163 47 chr5 29775604 29776151 -173309381 - MLT1E2 LTR MaLR 0 654 5 227 306 25 25 chr5 29776779 29776900 -173308632 - MLT1J LTR MaLR -161 350 230 2507 266 45 44 chr5 29778717 29779798 -173305734 + L1MEc LINE L1 1973 3051 -3164 2116 112 10 3 chr5 29779798 29780103 -173305429 + AluSx SINE Alu 1 307 -5 2507 266 45 44 chr5 29780103 29780414 -173305118 + L1MEc LINE L1 3051 3317 -2898 2256 145 67 12 chr5 29780414 29780820 -173304712 + MSTA LTR MaLR 1 428 0 2507 266 45 44 chr5 29780820 29780836 -173304696 + L1MEc LINE L1 3317 3331 -2884 345 296 45 126 chr5 29781056 29781563 -173303969 + L1MC4 LINE L1 7545 8010 -32 785 289 101 50 chr5 29782387 29782844 -173302688 + MLT1F1 LTR MaLR 80 559 -8 23 54 0 0 chr5 29783621 29783658 -173301874 + AT_rich Low_complexity Low_complexity 1 37 0 206 255 0 0 chr5 29783948 29783999 -173301533 + (TTA)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr5 29785752 29785773 -173299759 + AT_rich Low_complexity Low_complexity 1 21 0 6552 99 62 12 chr5 29785810 29786146 -173299386 - L1PA8A LINE L1 -314 5817 5499 2139 114 0 3 chr5 29786146 29786444 -173299088 - AluSg1 SINE Alu -12 297 1 6552 99 62 12 chr5 29786444 29787636 -173297896 - L1PA8A LINE L1 -632 5499 4206 304 163 0 0 chr5 29787636 29787685 -173297847 + MLT1B LTR MaLR 336 384 -6 592 271 68 51 chr5 29787693 29787985 -173297547 + MLT2C1 LTR ERVL 1 297 -100 309 89 0 0 chr5 29787991 29788036 -173297496 + (TC)n Simple_repeat Simple_repeat 2 46 0 363 152 0 0 chr5 29788037 29788116 -173297416 + (CA)n Simple_repeat Simple_repeat 1 79 0 693 208 59 25 chr5 29788170 29788372 -173297160 - L1MD3 LINE L1 0 7995 7787 904 239 77 68 chr5 29788402 29788899 -173296633 - MLT1D LTR MaLR -4 501 1 21 36 0 0 chr5 29789358 29789386 -173296146 + AT_rich Low_complexity Low_complexity 1 28 0 621 136 58 12 chr5 29790098 29790341 -173295191 + CT-rich Low_complexity Low_complexity 1 254 0 2213 100 7 0 chr5 29790817 29791107 -173294425 + AluSc SINE Alu 1 292 -17 22 56 0 0 chr5 29792203 29792239 -173293293 + AT_rich Low_complexity Low_complexity 1 36 0 1247 219 64 3 chr5 29792560 29792843 -173292689 - AluJo SINE Alu -2 300 1 22 56 0 0 chr5 29792965 29793001 -173292531 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 29793476 29793504 -173292028 + AT_rich Low_complexity Low_complexity 1 28 0 445 285 6 0 chr5 29793779 29793898 -173291634 + MIR SINE MIR 39 161 -47 234 300 167 24 chr5 29794442 29794652 -173290880 - L1M4 LINE L1 -1224 4922 4683 277 122 0 0 chr5 29794742 29794783 -173290749 + U2 snRNA snRNA 1 41 -147 2097 153 34 39 chr5 29794807 29795246 -173290286 + LTR56 LTR ERV1 9 445 0 1001 259 60 34 chr5 29795268 29795671 -173289861 - L1M4 LINE L1 -1627 4519 4101 1492 212 76 27 chr5 29795671 29796081 -173289451 + MER57B LTR ERV1 5 434 0 1001 259 60 34 chr5 29796081 29796125 -173289407 - L1M4 LINE L1 -2045 4101 4060 4724 92 36 0 chr5 29799249 29799946 -173285586 + LTR30 LTR ERV1 1 722 0 729 325 90 36 chr5 29800205 29800738 -173284794 + ERVL LTR ERVL 2669 3230 -2534 220 317 19 29 chr5 29801333 29801437 -173284095 + L2 LINE L2 2145 2247 -1067 * 233 376 24 57 chr5 29801427 29801759 -173283773 - L2 LINE L2 -1191 2123 1803 187 393 36 0 chr5 29802866 29802978 -173282554 + L2 LINE L2 1896 2011 -1303 191 278 0 0 chr5 29803115 29803151 -173282381 + L2 LINE L2 3267 3302 -11 347 304 84 31 chr5 29803202 29803429 -173282103 + L2 LINE L2 3075 3313 0 1988 123 13 13 chr5 29804257 29804567 -173280965 + AluSx SINE Alu 1 310 -2 231 274 157 32 chr5 29804896 29805144 -173280388 + HAL1b LINE L1 95 373 -975 983 274 87 19 chr5 29805206 29805575 -173279957 - L1ME3A LINE L1 -328 5842 5449 274 333 56 5 chr5 29805639 29805852 -173279680 + L1M4 LINE L1 5164 5387 -759 23 0 0 0 chr5 29806013 29806036 -173279496 + AT_rich Low_complexity Low_complexity 1 23 0 2318 121 0 50 chr5 29806036 29806246 -173279286 - L1MA2 LINE L1 -7 6297 6078 2372 55 0 0 chr5 29806246 29806535 -173278997 - AluY SINE Alu -17 294 6 207 0 0 0 chr5 29806539 29806562 -173278970 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1871 98 8 0 chr5 29806565 29806810 -173278722 - AluSc SINE Alu -32 277 31 2318 121 0 50 chr5 29806810 29806994 -173278538 - L1MA2 LINE L1 -231 6073 5914 237 315 68 93 chr5 29806996 29807320 -173278212 - L1MEd LINE L1 -5596 523 208 39 50 0 0 chr5 29809494 29809554 -173275978 + AT_rich Low_complexity Low_complexity 1 60 0 237 320 54 54 chr5 29811191 29811338 -173274194 + MER5A DNA MER1_type 36 182 -7 2261 97 0 0 chr5 29812542 29812841 -173272691 - AluY SINE Alu -12 299 1 1785 170 75 154 chr5 29813704 29814494 -173271038 + LTR8A LTR ERV1 1 727 0 189 0 0 0 chr5 29815610 29815631 -173269901 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2198 82 7 0 chr5 29815631 29815911 -173269621 - AluY SINE Alu -29 282 1 890 287 37 6 chr5 29817426 29817774 -173267758 + L1M4 LINE L1 3703 4061 -2085 2653 236 85 6 chr5 29817796 29818940 -173266592 + L1M4 LINE L1 4384 5618 -566 1156 206 61 8 chr5 29818940 29819202 -173266330 + MLT1A1 LTR MaLR 1 276 -89 1075 36 0 29 chr5 29819205 29819345 -173266187 + L1PA10 LINE L1 6031 6166 -2 997 201 16 39 chr5 29819496 29819750 -173265782 + L1PA16 LINE L1 4481 4728 -1418 3990 179 16 30 chr5 29819753 29820583 -173264949 + L1PA16 LINE L1 5312 6129 -37 275 216 46 26 chr5 29820583 29820736 -173264796 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 * 391 209 45 40 chr5 29820720 29820897 -173264635 + (TA)n Simple_repeat Simple_repeat 2 179 0 421 186 36 25 chr5 29820926 29821253 -173264279 + (TA)n Simple_repeat Simple_repeat 1 330 0 24 85 0 0 chr5 29821307 29821366 -173264166 + AT_rich Low_complexity Low_complexity 1 59 0 356 209 33 44 chr5 29821366 29821619 -173263913 + (TA)n Simple_repeat Simple_repeat 1 250 0 244 198 31 62 chr5 29821599 29821761 -173263771 + (TTATA)n Simple_repeat Simple_repeat 5 161 0 * 324 192 45 13 chr5 29821794 29821950 -173263582 + (TA)n Simple_repeat Simple_repeat 1 161 0 23 86 0 0 chr5 29822056 29822114 -173263418 + AT_rich Low_complexity Low_complexity 1 58 0 389 276 248 5 chr5 29822247 29822457 -173263075 - MLT1E1 LTR MaLR -391 263 3 225 218 92 23 chr5 29822619 29822706 -173262826 - L1ME3A LINE L1 -134 6036 5944 973 176 22 39 chr5 29823010 29823192 -173262340 + MER30 DNA MER1_type 52 230 0 629 245 65 43 chr5 29823192 29823462 -173262070 + MER52A LTR ERV1 1 380 -1375 24 91 0 0 chr5 29823516 29823582 -173261950 + AT_rich Low_complexity Low_complexity 1 66 0 429 36 0 0 chr5 29823858 29823913 -173261619 + (TG)n Simple_repeat Simple_repeat 2 56 0 1902 138 16 13 chr5 29824240 29824551 -173260981 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 29825560 29825582 -173259950 + AT_rich Low_complexity Low_complexity 1 22 0 307 282 12 0 chr5 29826550 29826635 -173258897 + MIR SINE MIR 83 168 -94 23 54 0 0 chr5 29826698 29826735 -173258797 + AT_rich Low_complexity Low_complexity 1 37 0 548 226 8 8 chr5 29826923 29827056 -173258476 - MLT1A1 LTR MaLR 0 365 233 256 132 0 179 chr5 29827084 29827190 -173258342 + LTR38B LTR ERV1 27 113 -497 967 215 137 41 chr5 29827281 29827717 -173257815 + LTR38B LTR ERV1 92 556 0 867 220 49 31 chr5 29827717 29827940 -173257592 - MLT1A1 LTR MaLR -129 236 10 2333 311 23 19 chr5 29828537 29829421 -173256111 - ERVL LTR ERVL -2396 3368 2482 28 0 0 0 chr5 29829428 29829456 -173256076 + AT_rich Low_complexity Low_complexity 1 28 0 3620 60 0 11 chr5 29829466 29829932 -173255600 - L1PA7 LINE L1 -11 6143 5683 460 119 0 0 chr5 29829932 29829999 -173255533 + L1PA7 LINE L1 5631 5697 -475 1829 327 41 6 chr5 29830027 29830906 -173254626 - ERVL LTR ERVL -3238 2438 1477 493 314 29 5 chr5 29831076 29831283 -173254249 - ERVL LTR ERVL -4448 1316 1105 322 368 14 0 chr5 29831815 29831959 -173253573 - ERVL LTR ERVL -5154 610 465 423 295 20 13 chr5 29832136 29832285 -173253247 - MLT2F LTR ERVL -513 150 1 648 251 43 21 chr5 29832513 29832700 -173252832 + MER20 DNA MER1_type 29 219 0 186 43 0 0 chr5 29833243 29833266 -173252266 + (A)n Simple_repeat Simple_repeat 1 23 0 70 92 0 0 chr5 29833368 29833564 -173251968 + AT_rich Low_complexity Low_complexity 1 196 0 186 422 37 18 chr5 29833625 29833734 -173251798 - MER5A DNA MER1_type 0 189 79 247 335 64 37 chr5 29834002 29834190 -173251342 - MLT1I LTR MaLR -17 392 200 23 0 0 0 chr5 29835606 29835629 -173249903 + AT_rich Low_complexity Low_complexity 1 23 0 48 0 0 0 chr5 29835646 29835694 -173249838 + AT_rich Low_complexity Low_complexity 1 48 0 1735 154 159 16 chr5 29836509 29836873 -173248659 - MSTA LTR MaLR -12 416 1 1714 86 0 21 chr5 29837275 29837509 -173248023 - AluSp SINE Alu -2 311 83 23 33 0 0 chr5 29837866 29837896 -173247636 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 29838594 29838616 -173246916 + AT_rich Low_complexity Low_complexity 1 22 0 223 300 0 109 chr5 29839272 29839346 -173246186 - L2 LINE L2 -19 3253 3193 1969 159 0 7 chr5 29839346 29839648 -173245884 + AluSx SINE Alu 1 300 -12 223 300 0 109 chr5 29839648 29839683 -173245849 - L2 LINE L2 -79 3193 3156 11370 218 25 20 chr5 29840516 29846446 -173239086 - L1PA16 LINE L1 0 6869 899 21 0 0 0 chr5 29846752 29846773 -173238759 + AT_rich Low_complexity Low_complexity 1 21 0 1974 130 9 13 chr5 29847541 29847856 -173237676 + L1PB4 LINE L1 5830 6143 -13 247 314 58 22 chr5 29847862 29847999 -173237533 + MIR SINE MIR 57 198 -64 940 294 95 24 chr5 29848909 29849967 -173235565 - L1ME3 LINE L1 -50 6112 4921 21 0 0 0 chr5 29850071 29850092 -173235440 + AT_rich Low_complexity Low_complexity 1 21 0 1619 214 58 16 chr5 29850551 29850916 -173234616 + MLT1B LTR MaLR 1 380 -10 245 256 47 12 chr5 29852563 29852649 -173232883 - MLT1I LTR MaLR -17 392 304 29 28 0 0 chr5 29853023 29853059 -173232473 + AT_rich Low_complexity Low_complexity 1 36 0 868 249 40 20 chr5 29853316 29853565 -173231967 + MLT1E1 LTR MaLR 6 259 -395 690 285 34 28 chr5 29854026 29854380 -173231152 - L1ME3 LINE L1 -2197 3949 3594 216 0 0 0 chr5 29854710 29854734 -173230798 + (TA)n Simple_repeat Simple_repeat 2 25 0 318 26 0 0 chr5 29854761 29854800 -173230732 + (CA)n Simple_repeat Simple_repeat 2 40 0 729 191 50 0 chr5 29854823 29854964 -173230568 + Tigger2 DNA MER2_type 4 151 -2567 4074 149 3 46 chr5 29854974 29855717 -173229815 + Tigger2 DNA MER2_type 330 1040 -1678 2004 113 3 0 chr5 29855717 29856025 -173229507 - AluSp SINE Alu 0 309 1 3981 158 72 3 chr5 29856043 29856750 -173228782 + Tigger2 DNA MER2_type 1963 2718 0 309 198 0 0 chr5 29856750 29856836 -173228696 + (TA)n Simple_repeat Simple_repeat 1 86 0 226 303 0 0 chr5 29856849 29856938 -173228594 - L1MC4 LINE L1 -1339 6703 6615 801 195 11 63 chr5 29857052 29857242 -173228290 - MLT2B1 LTR ERVL -264 256 77 773 224 0 0 chr5 29857265 29857408 -173228124 - ERVL LTR ERVL -1022 4742 4600 1433 224 53 28 chr5 29857418 29857779 -173227753 - MLT1A2 LTR MaLR 0 374 5 1467 204 3 19 chr5 29857841 29858155 -173227377 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 29858192 29858220 -173227312 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 29858591 29858623 -173226909 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 29859017 29859038 -173226494 + AT_rich Low_complexity Low_complexity 1 21 0 1954 137 0 4 chr5 29859225 29859563 -173225969 - AluSg SINE Alu 0 341 5 1934 165 0 0 chr5 29859566 29859863 -173225669 - AluSx SINE Alu -15 297 1 485 221 12 86 chr5 29859944 29860107 -173225425 + LTR52 LTR ERVL 1 151 -270 236 127 91 18 chr5 29860108 29860163 -173225369 + L1M4 LINE L1 3651 3709 -2437 1852 148 80 14 chr5 29860166 29860518 -173225014 + THE1C LTR MaLR 1 375 0 1977 148 51 24 chr5 29860521 29860853 -173224679 - THE1B LTR MaLR -8 356 16 11191 112 3 0 chr5 29860860 29862435 -173223097 - THE1B-int LTR MaLR 0 1580 1 1945 138 63 20 chr5 29862435 29862782 -173222750 - THE1B LTR MaLR 0 364 3 5897 182 26 94 chr5 29862790 29864417 -173221115 + L1M2 LINE L1 3708 5164 -1127 263 71 24 0 chr5 29864417 29864459 -173221073 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5897 182 26 94 chr5 29864459 29864839 -173220693 + L1M2 LINE L1 5164 5568 -723 2554 55 3 0 chr5 29864840 29865166 -173220366 + L1P LINE L1 3455 3781 -2365 581 51 0 117 chr5 29865267 29865404 -173220128 - L1P LINE L1 -2480 3666 3546 208 221 0 44 chr5 29967384 29967452 -173118080 + (TATG)n Simple_repeat Simple_repeat 4 68 0 235 138 35 17 chr5 29967566 29967624 -173117908 + (TA)n Simple_repeat Simple_repeat 1 59 0 273 59 0 0 chr5 29967683 29967717 -173117815 - U2 snRNA snRNA -154 34 1 1908 99 24 24 chr5 29967888 29968182 -173117350 + AluSx SINE Alu 1 294 -18 185 91 0 30 chr5 29968231 29968264 -173117268 + (CGGGA)n Simple_repeat Simple_repeat 2 33 0 225 274 0 0 chr5 29968727 29968778 -173116754 + GA-rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 29968872 29968893 -173116639 + AT_rich Low_complexity Low_complexity 1 21 0 749 226 62 4 chr5 29969360 29969703 -173115829 - MLT1D LTR MaLR 0 505 115 327 137 0 0 chr5 29969705 29969756 -173115776 - MADE1 DNA Mariner 0 80 30 280 288 0 0 chr5 29969784 29969850 -173115682 - MLT1D LTR MaLR -439 66 1 4992 201 51 59 chr5 29969886 29971589 -173113943 + L1MC1 LINE L1 4634 6324 -9 285 242 11 55 chr5 29971649 29971740 -173113792 - Tigger5 DNA MER2_type 0 2323 2237 1568 267 29 27 chr5 29971891 29972371 -173113161 - LTR38 LTR ERV1 -11 545 65 375 376 12 32 chr5 29972852 29973102 -173112430 - LTR38-int LTR ERV1 -257 6865 6621 258 196 59 0 chr5 29973096 29973147 -173112385 - PABL_B-int LTR ERV1 -5090 2032 1979 * 469 284 84 47 chr5 29973254 29973613 -173111919 + LTR15 LTR ERV1 104 475 -18 1566 180 40 42 chr5 29973623 29974297 -173111235 - MER49 LTR ERV1 -212 711 1 578 132 5 36 chr5 29974301 29974488 -173111044 - LTR38-int LTR ERV1 -1023 7097 6829 681 237 43 0 chr5 29974506 29974645 -173110887 - LTR38-int LTR ERV1 -608 6150 6006 288 184 78 136 chr5 29974955 29975058 -173110474 - LTR38-int LTR ERV1 -4240 3880 3784 740 201 146 18 chr5 29975255 29975630 -173109902 - LTR38-int LTR ERV1 -4513 2245 1663 2022 100 0 0 chr5 29975634 29975893 -173109639 - AluSc SINE Alu -20 289 31 5802 187 50 33 chr5 29975893 29976320 -173109212 - LTR38-int LTR ERV1 -7 1779 1361 3307 53 2 0 chr5 29976320 29976731 -173108801 + L1PA5 LINE L1 5740 6151 -3 5802 187 50 33 chr5 29976731 29977793 -173107739 - LTR38-int LTR ERV1 -425 1361 284 551 140 119 0 chr5 29978003 29978146 -173107386 - AluYa8 SINE Alu -150 160 1 325 323 128 5 chr5 29978261 29978456 -173107076 - MLT1J LTR MaLR -2 509 291 40 59 0 0 chr5 29978631 29978699 -173106833 + AT_rich Low_complexity Low_complexity 1 68 0 182 37 37 0 chr5 29979088 29979115 -173106417 + (TC)n Simple_repeat Simple_repeat 1 28 0 342 115 0 0 chr5 29979318 29979370 -173106162 + (TG)n Simple_repeat Simple_repeat 1 52 0 2209 148 11 0 chr5 29979548 29979925 -173105607 - L1PA13 LINE L1 0 6163 5783 856 251 103 14 chr5 29980818 29981109 -173104423 + L1ME LINE L1 4034 4350 -1796 1434 247 106 39 chr5 29981157 29981903 -173103629 + L1ME LINE L1 4931 5720 -446 1600 189 0 11 chr5 29981909 29982190 -173103342 - AluJb SINE Alu -34 278 1 839 64 0 0 chr5 29982481 29982590 -173102942 - L1PA5 LINE L1 0 6154 6046 479 17 17 0 chr5 29983349 29983409 -173102123 + (CA)n Simple_repeat Simple_repeat 1 61 0 1193 284 113 21 chr5 29983640 29984250 -173101282 - L2 LINE L2 -499 2815 2150 25 75 0 0 chr5 29984373 29984426 -173101106 + AT_rich Low_complexity Low_complexity 1 53 0 192 344 169 31 chr5 29984512 29984672 -173100860 - MIR3 SINE MIR -15 193 12 22 70 0 0 chr5 29984958 29985001 -173100531 + AT_rich Low_complexity Low_complexity 1 43 0 459 0 0 0 chr5 29985524 29985575 -173099957 + (CA)n Simple_repeat Simple_repeat 2 52 0 1539 198 0 3 chr5 29985683 29985966 -173099566 + AluJb SINE Alu 1 282 -30 338 214 12 24 chr5 29986033 29986117 -173099415 - L1MB1 LINE L1 -55 6134 6052 * 906 115 33 123 chr5 29986112 29986356 -173099176 + L1MA10 LINE L1 6111 6332 -2 21 0 0 0 chr5 29986737 29986758 -173098774 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 29987573 29987603 -173097929 + AT_rich Low_complexity Low_complexity 1 30 0 426 136 25 74 chr5 29989334 29989415 -173096117 - LTR38-int LTR ERV1 -1708 78 2 1558 285 45 24 chr5 29989429 29989962 -173095570 - LTR38 LTR ERV1 -12 544 1 315 253 40 53 chr5 29990021 29990171 -173095361 - L1M4 LINE L1 -3096 3050 2903 368 323 154 18 chr5 29990285 29990622 -173094910 + L1M4 LINE L1 4683 5065 -1081 2226 77 40 7 chr5 29992877 29993177 -173092355 + AluY SINE Alu 1 310 -1 6265 126 23 29 chr5 29993572 29994649 -173090883 - MER11C LTR ERVK 0 1071 1 355 242 42 0 chr5 29994748 29994843 -173090689 - L1MA10 LINE L1 -11 6323 6225 2428 63 0 0 chr5 29995092 29995391 -173090141 + AluY SINE Alu 1 299 -12 301 334 52 83 chr5 29995459 29995866 -173089666 - L1MB1 LINE L1 -2005 5803 5410 393 353 56 24 chr5 29995930 29996179 -173089353 + L2 LINE L2 3056 3312 -1 23 78 0 0 chr5 29998497 29998548 -173086984 + AT_rich Low_complexity Low_complexity 1 51 0 283 286 20 0 chr5 29999159 29999301 -173086231 + (TA)n Simple_repeat Simple_repeat 1 144 0 22 0 0 0 chr5 30000775 30000797 -173084735 + AT_rich Low_complexity Low_complexity 1 22 0 2400 36 0 0 chr5 30001369 30001686 -173083846 - AluY SINE Alu 0 317 1 24 0 0 0 chr5 30001882 30001906 -173083626 + AT_rich Low_complexity Low_complexity 1 24 0 445 284 119 37 chr5 30002053 30002380 -173083152 - L1MDa LINE L1 -2792 3423 3070 1505 210 35 35 chr5 30002381 30002752 -173082780 + MLT1A2 LTR MaLR 4 374 0 351 263 45 8 chr5 30002781 30002914 -173082618 - L1MDa LINE L1 -3147 3068 2931 277 336 105 0 chr5 30003064 30003293 -173082239 - L1MDa LINE L1 -3783 2432 2180 2324 66 10 7 chr5 30003422 30003723 -173081809 + AluY SINE Alu 1 302 -9 301 300 67 45 chr5 30004034 30004628 -173080904 - L1MDa LINE L1 -4571 1644 1072 21 0 0 0 chr5 30006103 30006124 -173079408 + AT_rich Low_complexity Low_complexity 1 21 0 2175 56 11 3 chr5 30006130 30006415 -173079117 + AluY SINE Alu 1 287 -24 564 29 0 0 chr5 30006418 30006488 -173079044 + (TAAAA)n Simple_repeat Simple_repeat 2 71 0 300 211 0 0 chr5 30006745 30006802 -173078730 - L1MC4 LINE L1 -1338 6704 6648 1458 197 14 24 chr5 30006943 30007268 -173078264 - AluJb SINE Alu 0 312 1 234 228 38 25 chr5 30008806 30008885 -173076647 - MER116 DNA Mariner 0 80 1 351 351 119 49 chr5 30010114 30010584 -173074948 + LTR67 LTR ERVL 8 510 -47 1840 140 4 4 chr5 30010638 30010917 -173074615 + AluSx SINE Alu 3 281 -31 254 309 60 24 chr5 30011350 30011518 -173074014 + ERVL LTR ERVL 508 681 -5083 995 254 23 0 chr5 30011896 30012113 -173073419 - MER58A DNA MER1_type -1 223 2 311 302 9 17 chr5 30012818 30012934 -173072598 + ERVL LTR ERVL 2242 2356 -3408 234 222 0 0 chr5 30013238 30013292 -173072240 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 225 0 0 0 chr5 30013324 30013349 -173072183 + (CA)n Simple_repeat Simple_repeat 2 26 0 249 57 0 0 chr5 30013349 30013384 -173072148 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 325 345 0 0 chr5 30013625 30013735 -173071797 + ERVL LTR ERVL 2977 3086 -2568 203 255 0 161 chr5 30013888 30014037 -173071495 + L2 LINE L2 3171 3295 -18 * 662 382 35 39 chr5 30014017 30014618 -173070914 - L2 LINE L2 -157 3156 2560 219 358 6 25 chr5 30014623 30014785 -173070747 + (TGG)n Simple_repeat Simple_repeat 2 160 0 310 282 94 0 chr5 30014796 30014913 -173070619 + MIR SINE MIR 127 254 -8 271 331 58 8 chr5 30016400 30016521 -173069011 + MIR SINE MIR 5 131 -131 25 51 0 0 chr5 30016675 30016714 -173068818 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr5 30017716 30017757 -173067775 + AT_rich Low_complexity Low_complexity 1 41 0 189 264 0 0 chr5 30018049 30018121 -173067411 + GA-rich Low_complexity Low_complexity 1 72 0 273 174 0 54 chr5 30018788 30018880 -173066652 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 214 263 26 13 chr5 30019128 30019204 -173066328 + (TTTA)n Simple_repeat Simple_repeat 1 77 0 18247 77 5 1 chr5 30019613 30022034 -173063498 + L1P LINE L1 1 2431 -3715 2177 54 0 4 chr5 30022050 30022328 -173063204 + L1PA5 LINE L1 5878 6154 0 316 202 24 48 chr5 30022353 30022437 -173063095 + L2 LINE L2 3190 3271 -1 405 282 101 7 chr5 30022539 30022688 -173062844 + MIR SINE MIR 4 166 -96 25 0 0 0 chr5 30023653 30023678 -173061854 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr5 30024258 30024300 -173061232 + AT_rich Low_complexity Low_complexity 1 42 0 28 29 0 0 chr5 30024743 30024778 -173060754 + AT_rich Low_complexity Low_complexity 1 35 0 1498 272 76 18 chr5 30024865 30025937 -173059595 - L1ME3 LINE L1 -222 5940 4799 716 252 79 14 chr5 30025958 30026236 -173059296 - L1ME3 LINE L1 -1518 4628 4333 333 337 134 18 chr5 30026342 30026618 -173058914 + L1ME3A LINE L1 5578 5885 -285 729 191 64 12 chr5 30027955 30028128 -173057404 + L1MA9 LINE L1 6131 6312 0 269 286 8 17 chr5 30029209 30029328 -173056204 + (TA)n Simple_repeat Simple_repeat 2 119 0 431 78 16 0 chr5 30029328 30029392 -173056140 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 398 320 20 34 chr5 30029476 30029623 -173055909 - MIR SINE MIR -113 149 5 18842 193 32 12 chr5 30030849 30035202 -173050330 + L1MA3 LINE L1 13 4457 -3108 6368 146 11 19 chr5 30035191 30036650 -173048882 + L1MA3 LINE L1 6281 7723 -1 * 23 68 0 0 chr5 30036910 30036954 -173048578 + AT_rich Low_complexity Low_complexity 1 44 0 5672 79 4 1 chr5 30036958 30037707 -173047825 - L1PA7 LINE L1 -3 6151 5401 1369 251 24 46 chr5 30038244 30038745 -173046787 + MLT1D LTR MaLR 16 505 0 25 83 0 0 chr5 30038880 30038940 -173046592 + AT_rich Low_complexity Low_complexity 1 60 0 24 53 0 0 chr5 30039037 30039075 -173046457 + AT_rich Low_complexity Low_complexity 1 38 0 417 248 39 26 chr5 30039233 30039386 -173046146 - L1ME1 LINE L1 -5 6161 6007 207 69 0 0 chr5 30039464 30039493 -173046039 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr5 30039723 30039753 -173045779 + AT_rich Low_complexity Low_complexity 1 30 0 383 235 30 18 chr5 30040291 30040457 -173045075 + (TA)n Simple_repeat Simple_repeat 2 169 0 218 173 40 40 chr5 30041859 30041934 -173043598 + L2 LINE L2 2831 2905 -367 183 310 123 37 chr5 30042653 30042840 -173042692 + MIR SINE MIR 60 262 0 249 417 11 0 chr5 30043510 30043685 -173041847 + L2 LINE L2 2496 2672 -642 240 111 0 0 chr5 30043708 30043744 -173041788 + (T)n Simple_repeat Simple_repeat 1 36 0 516 178 90 140 chr5 30043744 30044087 -173041445 - LTR7 LTR ERV1 -38 412 87 1324 81 47 8 chr5 30044089 30044323 -173041209 + SVA Other Other 455 697 -689 700 139 0 0 chr5 30044351 30044459 -173041073 + AluSq/x SINE Alu 1 108 -205 228 35 0 0 chr5 30044471 30044500 -173041032 + (CCAA)n Simple_repeat Simple_repeat 1 29 0 202 365 0 0 chr5 30044540 30044614 -173040918 + CT-rich Low_complexity Low_complexity 2 75 0 335 338 132 64 chr5 30044971 30045772 -173039760 + L1 LINE L1 535 1390 -5459 * 348 286 89 125 chr5 30045426 30046257 -173039275 - L1M2 LINE L1 -5442 1407 607 240 178 0 0 chr5 30047033 30047078 -173038454 + SUBTEL_sa Satellite Satellite 59 103 -71 21 57 0 0 chr5 30048487 30048522 -173037010 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 30049528 30049563 -173035969 + AT_rich Low_complexity Low_complexity 1 35 0 566 302 23 23 chr5 30049583 30049798 -173035734 - MER20 DNA MER1_type -1 218 4 311 288 70 23 chr5 30049934 30050149 -173035383 + L1 LINE L1 5080 5304 -1544 312 295 39 0 chr5 30050177 30050255 -173035277 + L1MCa LINE L1 2 82 -6777 775 179 90 4 chr5 30050283 30050517 -173035015 + L1MCa LINE L1 2745 2998 -3959 1402 326 5 29 chr5 30050517 30051272 -173034260 + L1M4 LINE L1 3718 4454 -1692 400 331 39 6 chr5 30051605 30051783 -173033749 - HERVL LTR ERVL -1331 4433 4250 470 252 104 56 chr5 30051819 30052123 -173033409 - HERVL LTR ERVL -1337 4148 3831 652 196 85 13 chr5 30052157 30052310 -173033222 + MER20 DNA MER1_type 55 218 -1 2097 157 11 11 chr5 30053061 30053436 -173032096 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr5 30053505 30053538 -173031994 + AT_rich Low_complexity Low_complexity 1 33 0 180 375 14 14 chr5 30054058 30054130 -173031402 - L2 LINE L2 -31 3282 3211 279 301 136 0 chr5 30054191 30054294 -173031238 + MER5C DNA MER1_type 8 124 -200 23 68 0 0 chr5 30054439 30054483 -173031049 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 30055249 30055275 -173030257 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr5 30055493 30055537 -173029995 + AT_rich Low_complexity Low_complexity 1 44 0 744 68 17 8 chr5 30057106 30057223 -173028309 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 183 261 0 0 chr5 30057796 30057842 -173027690 + L3b LINE CR1 1536 1581 -2 22 56 0 0 chr5 30058013 30058049 -173027483 + AT_rich Low_complexity Low_complexity 1 36 0 198 103 0 0 chr5 30058239 30058268 -173027264 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 285 333 37 15 chr5 30058638 30058773 -173026759 - MIR SINE MIR -34 228 91 22 56 0 0 chr5 30058798 30058834 -173026698 + AT_rich Low_complexity Low_complexity 1 36 0 1224 195 70 8 chr5 30060610 30060851 -173024681 - MSTB LTR MaLR 0 426 171 4352 210 110 4 chr5 30060856 30061784 -173023748 - MSTB-int LTR MaLR -625 1026 1 2275 190 17 9 chr5 30061784 30062205 -173023327 - MSTB LTR MaLR 0 426 3 482 108 12 0 chr5 30063122 30063205 -173022327 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 2145 125 0 3 chr5 30063863 30064174 -173021358 - AluSx SINE Alu -2 310 1 335 264 23 0 chr5 30064447 30064534 -173020998 + L1MC4 LINE L1 6614 6702 -1340 183 186 0 0 chr5 30064921 30064964 -173020568 + (TA)n Simple_repeat Simple_repeat 1 43 0 2012 131 0 7 chr5 30065007 30065298 -173020234 - AluSx SINE Alu -8 304 16 1151 238 38 3 chr5 30065741 30066031 -173019501 + AluJo SINE Alu 2 301 -1 346 246 24 16 chr5 30066439 30066565 -173018967 + (TA)n Simple_repeat Simple_repeat 1 127 0 235 296 23 0 chr5 30066565 30066653 -173018879 - L1MC4 LINE L1 -1339 6703 6614 222 209 23 0 chr5 30066657 30066700 -173018832 + GA-rich Low_complexity Low_complexity 1 44 0 704 264 0 28 chr5 30066713 30066891 -173018641 - MLT2C2 LTR ERVL -89 375 203 310 138 0 17 chr5 30066912 30066970 -173018562 - MLT2C2 LTR ERVL -407 57 1 31 58 0 0 chr5 30067503 30067555 -173017977 + AT_rich Low_complexity Low_complexity 1 52 0 2240 83 0 17 chr5 30067875 30068177 -173017355 + AluY SINE Alu 1 297 -14 29 47 0 0 chr5 30068378 30068421 -173017111 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 30068446 30068467 -173017065 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 30068505 30068528 -173017004 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 30069146 30069174 -173016358 + AT_rich Low_complexity Low_complexity 1 28 0 205 214 0 0 chr5 30069740 30069782 -173015750 - L2 LINE L2 0 3313 3272 265 214 56 0 chr5 30069814 30069903 -173015629 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 3472 218 44 36 chr5 30071276 30072075 -173013457 - L1MB4 LINE L1 -1 6415 5592 2273 111 0 0 chr5 30072075 30072381 -173013151 - AluSg SINE Alu -4 306 1 3472 218 44 36 chr5 30072381 30072863 -173012669 - L1MB4 LINE L1 -824 5592 5115 972 265 42 11 chr5 30072874 30073233 -173012299 - L1MB4 LINE L1 -3594 2788 2419 2818 244 77 57 chr5 30073302 30074491 -173011041 - L1MB4 LINE L1 -4480 1904 693 28 71 0 0 chr5 30077540 30077596 -173007936 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr5 30077839 30077861 -173007671 + AT_rich Low_complexity Low_complexity 1 22 0 1762 114 9 82 chr5 30077864 30078180 -173007352 - AluSx SINE Alu -19 293 1 198 293 35 0 chr5 30078194 30078252 -173007280 - L2 LINE L2 -62 3251 3192 261 357 54 36 chr5 30078290 30078458 -173007074 - L2 LINE L2 -259 3054 2884 21 82 0 0 chr5 30078471 30078520 -173007012 + AT_rich Low_complexity Low_complexity 1 49 0 2082 102 3 0 chr5 30078833 30079116 -173006416 + AluY SINE Alu 1 284 -27 423 0 0 0 chr5 30079116 30079163 -173006369 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr5 30079224 30079252 -173006280 + AT_rich Low_complexity Low_complexity 1 28 0 195 318 35 75 chr5 30079302 30079475 -173006057 - L2 LINE L2 -212 3060 2895 24 32 0 0 chr5 30079513 30079544 -173005988 + AT_rich Low_complexity Low_complexity 1 31 0 659 236 99 81 chr5 30079625 30079947 -173005585 - L1ME2 LINE L1 -1 6163 5836 1696 287 63 39 chr5 30079950 30080121 -173005411 - L1MEc LINE L1 -4242 2154 1989 1594 70 124 77 chr5 30080121 30080380 -173005152 + AluY SINE Alu 28 298 -13 1696 287 63 39 chr5 30080380 30081076 -173004456 - L1MEc LINE L1 -4407 1989 1266 4814 171 24 21 chr5 30081083 30082387 -173003145 - L1PB3 LINE L1 -4 6866 5554 638 243 0 29 chr5 30082392 30082602 -173002930 - L1PB3 LINE L1 -1713 5149 4946 1992 163 45 59 chr5 30082620 30083100 -173002432 + MLT2A2 LTR ERVL 1 500 -54 261 119 0 0 chr5 30083104 30083146 -173002386 + (TA)n Simple_repeat Simple_repeat 1 42 0 552 203 90 15 chr5 30083146 30083279 -173002253 - L1ME2 LINE L1 -29 6135 5993 207 232 18 0 chr5 30083282 30083338 -173002194 + (TA)n Simple_repeat Simple_repeat 2 58 0 736 171 35 31 chr5 30083340 30083511 -173002021 - MLT2A2 LTR ERVL -35 504 293 341 111 0 0 chr5 30083543 30083597 -173001935 + MLT2A1 LTR ERVL 391 444 0 7204 224 15 22 chr5 30083600 30084637 -173000895 - L1PB3 LINE L1 -1923 4939 3919 1751 151 70 25 chr5 30084637 30084994 -173000538 - THE1C LTR MaLR -2 373 1 7204 224 15 22 chr5 30084994 30085865 -172999667 - L1PB3 LINE L1 -2943 3919 3044 1749 194 126 8 chr5 30085880 30086252 -172999280 - MSTA LTR MaLR -12 416 1 8315 168 11 48 chr5 30086252 30087873 -172997659 - MSTA-int LTR MaLR 0 1580 21 1781 163 127 18 chr5 30087885 30088271 -172997261 - MSTA LTR MaLR 0 428 1 5265 240 62 21 chr5 30088271 30092094 -172993438 - L1PB3 LINE L1 -3814 3048 3 1997 157 7 0 chr5 30092243 30092549 -172992983 + AluSx SINE Alu 2 309 -3 268 321 97 24 chr5 30093310 30093475 -172992057 + L2 LINE L2 2998 3174 -139 21 0 0 0 chr5 30093489 30093510 -172992022 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr5 30094809 30094851 -172990681 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr5 30096069 30096108 -172989424 + AT_rich Low_complexity Low_complexity 1 39 0 10918 34 0 0 chr5 30097216 30099308 -172986224 + L1PA3 LINE L1 4062 6155 0 29 70 0 0 chr5 30099362 30099419 -172986113 + AT_rich Low_complexity Low_complexity 1 57 0 1651 219 38 14 chr5 30099419 30099785 -172985747 + Tigger1 DNA MER2_type 2 376 -2042 6698 141 25 7 chr5 30099789 30100175 -172985357 + Tigger1 DNA MER2_type 792 1170 -1248 1874 148 24 0 chr5 30100175 30100466 -172985066 + AluSx SINE Alu 1 298 -14 6698 141 25 7 chr5 30100466 30101156 -172984376 + Tigger1 DNA MER2_type 1170 1887 -531 2017 234 18 24 chr5 30101167 30101715 -172983817 + L1 LINE L1 3939 4483 -1663 25 51 0 0 chr5 30101766 30101805 -172983727 + AT_rich Low_complexity Low_complexity 1 39 0 267 286 94 72 chr5 30101808 30102084 -172983448 + HAL1 LINE L1 1458 1739 -768 3129 187 26 47 chr5 30102304 30102871 -172982661 + L1MC1 LINE L1 5613 6163 -170 2009 93 0 18 chr5 30102871 30103149 -172982383 + AluSg SINE Alu 35 307 -3 3129 187 26 47 chr5 30103149 30103299 -172982233 + L1MC1 LINE L1 6163 6315 -18 34 55 0 0 chr5 30104292 30104347 -172981185 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 30104811 30104832 -172980700 + AT_rich Low_complexity Low_complexity 1 21 0 204 125 0 0 chr5 30105149 30105181 -172980351 + (TA)n Simple_repeat Simple_repeat 2 33 0 461 216 164 8 chr5 30105895 30106029 -172979503 + MER77 LTR ERV1 444 598 -7 3104 245 33 31 chr5 30106424 30107009 -172978523 - L1MB8 LINE L1 0 6178 5596 1642 175 34 3 chr5 30107009 30107300 -172978232 - AluJb SINE Alu -10 302 3 3104 245 33 31 chr5 30107300 30108335 -172977197 - L1MB8 LINE L1 -582 5596 4557 24 0 0 0 chr5 30108877 30108901 -172976631 + AT_rich Low_complexity Low_complexity 1 24 0 325 316 82 20 chr5 30109497 30109693 -172975839 - HERVL LTR ERVL -3107 2547 2340 438 337 36 5 chr5 30109696 30109889 -172975643 + MIR SINE MIR 7 205 -57 1844 110 0 8 chr5 30111042 30111305 -172974227 + AluSx SINE Alu 1 261 -51 189 0 0 0 chr5 30111959 30111980 -172973552 + (A)n Simple_repeat Simple_repeat 1 21 0 456 282 90 116 chr5 30112601 30113586 -172971946 + L1MEc LINE L1 803 1762 -4634 2577 236 60 27 chr5 30114388 30115054 -172970478 - MER76 LTR ERV 0 688 1 1559 177 46 7 chr5 30115082 30115364 -172970168 + AluSx SINE Alu 7 299 -13 417 311 259 23 chr5 30115389 30115830 -172969702 + HAL1 LINE L1 1023 1567 -940 1878 147 11 7 chr5 30116080 30116500 -172969032 + L1PB3 LINE L1 5262 5778 -376 227 271 0 0 chr5 30116502 30116550 -172968982 + (CATA)n Simple_repeat Simple_repeat 3 50 0 1904 194 3 0 chr5 30116551 30116911 -172968621 + L1PB3 LINE L1 5789 6149 -5 766 293 176 29 chr5 30117192 30117515 -172968017 + HAL1 LINE L1 1624 1898 -609 983 248 94 49 chr5 30117515 30117962 -172967570 + MLT1C LTR MaLR 1 467 0 766 293 176 29 chr5 30117962 30118405 -172967127 + HAL1 LINE L1 1898 2503 -4 22 0 0 0 chr5 30119322 30119344 -172966188 + AT_rich Low_complexity Low_complexity 1 22 0 5539 125 21 42 chr5 30119423 30120389 -172965143 - L1MA2 LINE L1 -7 6297 5353 476 267 80 53 chr5 30120845 30121070 -172964462 + MIR SINE MIR 32 262 0 2060 183 21 0 chr5 30121356 30121738 -172963794 - MLT1B LTR MaLR 0 390 1 1618 185 18 110 chr5 30121780 30122233 -172963299 - MLT2D LTR ERVL 0 553 143 1235 147 36 9 chr5 30122299 30122420 -172963112 - Ricksha DNA DNA -2772 474 348 17508 179 22 16 chr5 30122420 30123014 -172962518 - ERVL-D LTR ERVL -2 5762 5173 2391 106 35 54 chr5 30123014 30123420 -172962112 + MER48 LTR ERV1 1 398 0 17508 179 22 16 chr5 30123420 30125990 -172959542 - ERVL-D LTR ERVL -591 5173 2579 19988 37 0 0 chr5 30125990 30128452 -172957080 - L1P LINE L1 -2285 3861 1399 7992 38 0 1 chr5 30128442 30129412 -172956120 - L1P LINE L1 -1313 4833 3865 * 7617 22 0 0 chr5 30129412 30130812 -172954720 + L1PA2 LINE L1 4770 6169 0 1249 75 0 0 chr5 30130812 30130971 -172954561 - ERVL-D LTR ERVL -3181 2583 2425 230 368 0 0 chr5 30131209 30131285 -172954247 - MIR3 SINE MIR -18 190 115 23 78 0 0 chr5 30132092 30132143 -172953389 + AT_rich Low_complexity Low_complexity 1 51 0 36 23 0 0 chr5 30132290 30132333 -172953199 + AT_rich Low_complexity Low_complexity 1 43 0 2318 45 52 3 chr5 30133147 30133436 -172952096 + AluY SINE Alu 1 303 -8 203 291 0 0 chr5 30133710 30133765 -172951767 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr5 30135668 30135689 -172949843 + AT_rich Low_complexity Low_complexity 1 21 0 704 290 76 37 chr5 30135936 30136264 -172949268 - MER2 DNA MER2_type -3 342 2 1437 275 18 10 chr5 30137013 30137406 -172948126 + MSTD LTR MaLR 1 396 0 5598 264 63 28 chr5 30137408 30139083 -172946449 + MSTD-int LTR MaLR 2 1735 0 1232 249 78 19 chr5 30139083 30139457 -172946075 + MSTD LTR MaLR 1 396 0 22 0 0 0 chr5 30139862 30139884 -172945648 + AT_rich Low_complexity Low_complexity 1 22 0 2186 116 0 0 chr5 30139937 30140231 -172945301 + AluY SINE Alu 1 294 -17 33 25 0 0 chr5 30140679 30140719 -172944813 + AT_rich Low_complexity Low_complexity 1 40 0 24 67 0 0 chr5 30141489 30141534 -172943998 + AT_rich Low_complexity Low_complexity 1 45 0 1863 141 83 3 chr5 30141741 30142068 -172943464 + THE1C LTR MaLR 23 375 0 6620 127 225 43 chr5 30142068 30143404 -172942128 + THE1C-int LTR MaLR 1 1578 -2 1790 147 76 17 chr5 30143406 30143760 -172941772 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr5 30144107 30144131 -172941401 + AT_rich Low_complexity Low_complexity 1 24 0 307 252 126 17 chr5 30144190 30144309 -172941223 + L2 LINE L2 3178 3309 -4 230 247 13 39 chr5 30144393 30144470 -172941062 + GA-rich Low_complexity Low_complexity 4 78 0 28 0 0 0 chr5 30145292 30145320 -172940212 + AT_rich Low_complexity Low_complexity 1 28 0 4992 201 32 7 chr5 30145327 30146435 -172939097 + L1P5 LINE L1 4061 5225 -931 194 0 0 37 chr5 30146435 30146462 -172939070 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4992 201 32 7 chr5 30146462 30147027 -172938505 + L1P5 LINE L1 5225 5775 -381 220 154 62 31 chr5 30148579 30148644 -172936888 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 27 29 0 0 chr5 30148702 30148736 -172936796 + AT_rich Low_complexity Low_complexity 1 34 0 201 175 0 0 chr5 30148817 30148857 -172936675 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 1262 163 262 23 chr5 30149370 30149714 -172935818 - MSTA LTR MaLR 0 428 3 8607 189 16 9 chr5 30149716 30151355 -172934177 - MSTA-int LTR MaLR 0 1651 1 2076 159 82 20 chr5 30151355 30151758 -172933774 - MSTA LTR MaLR 0 428 1 1657 217 133 5 chr5 30152688 30153117 -172932415 + MLT1D LTR MaLR 3 486 -19 292 331 95 25 chr5 30153513 30153755 -172931777 + MLT1H LTR MaLR 286 544 -5 295 238 0 38 chr5 30154049 30154129 -172931403 - MIR SINE MIR 0 262 186 2163 118 3 0 chr5 30154141 30154438 -172931094 - AluSx SINE Alu -14 298 1 1111 234 151 34 chr5 30154827 30155245 -172930287 + MLT1C LTR MaLR 1 467 0 647 148 0 8 chr5 30155297 30155419 -172930113 + (TCC)n Simple_repeat Simple_repeat 1 121 0 2127 109 3 32 chr5 30155419 30155730 -172929802 - AluSq SINE Alu -11 302 1 2020 206 52 82 chr5 30156110 30156741 -172928791 + LTR9 LTR ERV1 1 612 0 23 0 0 0 chr5 30157893 30157916 -172927616 + AT_rich Low_complexity Low_complexity 1 23 0 201 158 0 0 chr5 30158042 30158080 -172927452 + A-rich Low_complexity Low_complexity 1 38 0 28 71 0 0 chr5 30158293 30158349 -172927183 + AT_rich Low_complexity Low_complexity 1 56 0 2155 217 29 3 chr5 30159004 30159540 -172925992 - L1MB2 LINE L1 -10 6161 5490 2200 113 0 7 chr5 30159540 30159840 -172925692 - AluSg SINE Alu -12 298 1 2155 217 29 3 chr5 30159840 30159958 -172925574 - L1MB2 LINE L1 -681 5490 5377 183 239 0 0 chr5 30160322 30160368 -172925164 + (TA)n Simple_repeat Simple_repeat 2 47 0 219 114 0 0 chr5 30160815 30160850 -172924682 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 54 0 0 chr5 30161890 30161927 -172923605 + AT_rich Low_complexity Low_complexity 1 37 0 550 290 30 71 chr5 30162229 30162498 -172923034 + L2 LINE L2 1923 2180 -1134 1068 143 23 97 chr5 30165197 30165264 -172920268 + Tigger2 DNA MER2_type 2479 2549 -169 1791 139 0 73 chr5 30165264 30165580 -172919952 + AluJb SINE Alu 1 293 -19 1068 143 23 97 chr5 30165580 30165771 -172919761 + Tigger2 DNA MER2_type 2549 2718 0 597 282 67 62 chr5 30165774 30166132 -172919400 + L2 LINE L2 2498 2857 -457 21 82 0 0 chr5 30167732 30167781 -172917751 + AT_rich Low_complexity Low_complexity 1 49 0 21 57 0 0 chr5 30167934 30167969 -172917563 + AT_rich Low_complexity Low_complexity 1 35 0 2120 48 0 8 chr5 30168306 30168574 -172916958 - L1PA7 LINE L1 -1 6153 5888 42339 37 22 1 chr5 30168729 30174752 -172910780 - L1PA2 LINE L1 -2 6153 1 3340 87 5 143 chr5 30174753 30175418 -172910114 - L1PA7 LINE L1 -253 5902 5330 380 37 19 0 chr5 30175616 30175670 -172909862 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 366 271 0 70 chr5 30175745 30175874 -172909658 - L1MC4 LINE L1 -1309 6733 6614 993 106 0 0 chr5 30175883 30176063 -172909469 + (TA)n Simple_repeat Simple_repeat 1 180 0 312 284 23 0 chr5 30176066 30176154 -172909378 - L1MC4 LINE L1 -1339 6703 6614 270 143 0 0 chr5 30176101 30176164 -172909368 + (TA)n Simple_repeat Simple_repeat 2 64 0 * 346 255 0 43 chr5 30176166 30176260 -172909272 - L1MC4 LINE L1 -1339 6703 6614 264 148 0 0 chr5 30176263 30176324 -172909208 + (TA)n Simple_repeat Simple_repeat 2 62 0 372 270 0 0 chr5 30176327 30176416 -172909116 - L1MC4 LINE L1 -1340 6702 6614 232 138 69 0 chr5 30176416 30176474 -172909058 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 348 267 47 0 chr5 30176474 30176560 -172908972 + L1MC4 LINE L1 6614 6703 -1339 227 375 47 63 chr5 30176663 30176964 -172908568 - L2 LINE L2 -1157 2157 1862 2135 129 0 3 chr5 30177084 30177436 -172908096 + AluSg SINE Alu 1 310 0 1559 238 42 27 chr5 30177845 30178295 -172907237 + MLT1C LTR MaLR 11 467 0 229 343 125 33 chr5 30178297 30178664 -172906868 - L2 LINE L2 -2203 1111 711 483 296 17 29 chr5 30179041 30179213 -172906319 + L3 LINE CR1 636 805 -772 4674 216 45 1 chr5 30180030 30181297 -172904235 - L1MC2 LINE L1 -9 6335 5016 880 236 45 63 chr5 30181303 30181637 -172903895 + L1MD3 LINE L1 28 355 -6071 1184 162 37 21 chr5 30181655 30182020 -172903512 + L1MD3 LINE L1 1489 1946 -4480 512 216 72 18 chr5 30182016 30182183 -172903349 - L1MC5 LINE L1 -769 7192 7017 * 532 213 15 7 chr5 30182206 30182342 -172903190 + L1MD3 LINE L1 4201 4337 -2089 * 950 276 129 11 chr5 30182332 30183151 -172902381 + L1MD3 LINE L1 5491 6442 -4 243 0 0 0 chr5 30183160 30183187 -172902345 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 228 200 0 0 chr5 30183949 30183999 -172901533 + CT-rich Low_complexity Low_complexity 1 50 0 1017 214 61 36 chr5 30185191 30185631 -172899901 - L1M4 LINE L1 -2918 3228 2778 2883 244 29 37 chr5 30185666 30186574 -172898958 - MLT1-int LTR MaLR -244 1127 258 748 228 89 17 chr5 30186575 30186812 -172898720 - L1MC2 LINE L1 -53 6291 6038 237 291 43 35 chr5 30186885 30186970 -172898562 - HAL1b LINE L1 -751 597 509 2007 147 29 29 chr5 30186970 30187345 -172898187 - THE1C LTR MaLR 0 375 1 237 291 43 35 chr5 30187345 30187400 -172898132 - HAL1b LINE L1 -839 509 456 294 267 38 38 chr5 30188013 30188144 -172897388 - L1MC4 LINE L1 -21 8021 7891 219 69 0 0 chr5 30189020 30189049 -172896483 + (T)n Simple_repeat Simple_repeat 1 29 0 1942 201 40 81 chr5 30190721 30191299 -172894233 - MLT2B3 LTR ERVL 0 554 1 350 346 65 14 chr5 30192010 30192227 -172893305 + MLT1K LTR MaLR 199 426 -162 395 191 76 38 chr5 30192230 30192335 -172893197 + FLAM_A SINE Alu 22 130 -3 284 328 29 35 chr5 30192339 30192510 -172893022 + MLT1K LTR MaLR 417 586 -2 877 77 33 39 chr5 30193021 30193202 -172892330 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 833 132 24 6 chr5 30193218 30193385 -172892147 + GA-rich Low_complexity Low_complexity 3 172 0 198 103 0 0 chr5 30193407 30193436 -172892096 + (GGGGA)n Simple_repeat Simple_repeat 3 31 0 543 210 152 5 chr5 30194986 30195196 -172890336 + MLT1E2 LTR MaLR 73 298 -328 2311 219 16 14 chr5 30195214 30195716 -172889816 + MER67D LTR ERV1 10 512 -2 1115 224 103 4 chr5 30195742 30196014 -172889518 + MLT1E2 LTR MaLR 319 617 -9 1447 202 0 0 chr5 30196617 30196879 -172888653 + AluJb SINE Alu 24 285 -27 284 156 44 0 chr5 30196879 30196969 -172888563 + (TA)n Simple_repeat Simple_repeat 1 94 0 21 0 0 0 chr5 30198253 30198274 -172887258 + AT_rich Low_complexity Low_complexity 1 21 0 369 345 65 49 chr5 30198613 30198938 -172886594 - L2 LINE L2 -342 2972 2643 2467 63 0 0 chr5 30200363 30200663 -172884869 + AluY SINE Alu 1 300 -11 391 321 49 62 chr5 30202123 30202447 -172883085 - MLT1I LTR MaLR -5 404 85 413 149 0 23 chr5 30202914 30203001 -172882531 + (GGGGA)n Simple_repeat Simple_repeat 5 89 0 219 139 0 0 chr5 30203973 30204009 -172881523 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2176 108 0 3 chr5 30204009 30204306 -172881226 - AluSq SINE Alu -17 296 1 232 296 68 30 chr5 30204525 30204657 -172880875 + L1ME LINE L1 5500 5636 -534 235 302 47 0 chr5 30204665 30204771 -172880761 + L1ME LINE L1 5714 5824 -346 1547 134 38 4 chr5 30204938 30205177 -172880355 + AluSg SINE Alu 42 288 -22 337 316 68 11 chr5 30205512 30205689 -172879843 + MIR SINE MIR 41 227 -35 29 84 0 0 chr5 30206835 30206906 -172878626 + AT_rich Low_complexity Low_complexity 1 71 0 24 53 0 0 chr5 30207180 30207218 -172878314 + AT_rich Low_complexity Low_complexity 1 38 0 238 302 66 97 chr5 30207888 30208146 -172877386 - L2 LINE L2 -837 2477 2228 556 367 31 8 chr5 30208286 30208542 -172876990 - MIR SINE MIR 0 262 1 256 182 57 0 chr5 30208684 30208772 -172876760 + CT-rich Low_complexity Low_complexity 2 94 0 518 280 0 32 chr5 30209804 30209988 -172875544 - MER3 DNA MER1_type -1 208 31 1471 191 87 48 chr5 30209988 30210515 -172875017 + MER67C LTR ERV1 1 514 0 8839 32 0 0 chr5 30212356 30214183 -172871349 - L1PA3 LINE L1 -5 6150 4324 22638 31 4 0 chr5 30214185 30216933 -172868599 + L1P LINE L1 1649 4407 -1739 969 323 187 28 chr5 30216943 30217837 -172867695 + L2 LINE L2 1256 2291 -1023 1781 184 34 6 chr5 30217837 30218191 -172867341 + MLT1A1 LTR MaLR 1 364 -1 186 43 0 0 chr5 30218216 30218239 -172867293 + (TTCTG)n Simple_repeat Simple_repeat 3 25 0 4951 29 5 0 chr5 30218239 30218831 -172866701 + L1PA4 LINE L1 5561 6155 0 1048 310 115 39 chr5 30219463 30220120 -172865412 + L2 LINE L2 2340 3041 -272 461 139 15 36 chr5 30220212 30220349 -172865183 + (TA)n Simple_repeat Simple_repeat 2 135 0 1775 171 0 31 chr5 30220568 30220890 -172864642 - AluJo SINE Alu 0 312 1 1451 191 101 42 chr5 30222016 30222085 -172863447 - MSTB1 LTR MaLR 0 432 368 1970 110 0 18 chr5 30222085 30222367 -172863165 + AluSc SINE Alu 1 277 -32 1451 191 101 42 chr5 30222367 30222705 -172862827 - MSTB1 LTR MaLR -64 368 1 204 40 0 0 chr5 30222889 30222914 -172862618 + (TG)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr5 30224091 30224114 -172861418 + (TG)n Simple_repeat Simple_repeat 2 24 0 379 314 16 43 chr5 30224234 30224422 -172861110 - MLT1I LTR MaLR -183 226 44 3936 83 63 3 chr5 30224523 30225091 -172860441 + LTR14B LTR ERVK 7 608 0 30 0 0 0 chr5 30225422 30225452 -172860080 + AT_rich Low_complexity Low_complexity 1 30 0 2095 115 3 0 chr5 30226530 30226818 -172858714 - AluSx SINE Alu -23 289 1 416 182 0 20 chr5 30226883 30226982 -172858550 + (TATATG)n Simple_repeat Simple_repeat 3 99 0 251 107 0 71 chr5 30226987 30227043 -172858489 - L1MC4 LINE L1 -1339 6703 6652 2361 90 3 0 chr5 30227708 30228019 -172857513 + AluSp SINE Alu 2 313 0 2173 108 0 0 chr5 30230995 30231281 -172854251 - AluSx SINE Alu -26 286 1 3746 77 8 6 chr5 30231772 30232293 -172853239 - L1MA1 LINE L1 -527 5775 5254 3161 105 29 25 chr5 30232312 30232825 -172852707 + L1MA1 LINE L1 5781 6295 -7 29 0 0 0 chr5 30232825 30232854 -172852678 + AT_rich Low_complexity Low_complexity 1 29 0 26 64 0 0 chr5 30235092 30235139 -172850393 + AT_rich Low_complexity Low_complexity 1 47 0 337 289 22 0 chr5 30236026 30236116 -172849416 - MIR SINE MIR -95 167 76 1157 154 37 15 chr5 30238546 30238750 -172846782 - MSTA LTR MaLR -10 418 211 1126 194 0 15 chr5 30238849 30239055 -172846477 - MSTA LTR MaLR -225 203 1 1593 175 25 62 chr5 30239905 30240306 -172845226 - L1 LINE L1 -789 5357 4972 198 0 0 0 chr5 30240316 30240338 -172845194 + (CATATA)n Simple_repeat Simple_repeat 3 24 0 2597 145 14 26 chr5 30240370 30240861 -172844671 + L1MA9 LINE L1 5828 6312 0 23 0 0 0 chr5 30240936 30240959 -172844573 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 30241614 30241646 -172843886 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 30241859 30241885 -172843647 + AT_rich Low_complexity Low_complexity 1 26 0 4259 96 3 5 chr5 30242124 30242731 -172842801 - L1PB1 LINE L1 -1 6150 5545 2235 193 73 5 chr5 30242731 30243322 -172842210 + L1P LINE L1 4735 5374 -777 1211 114 0 0 chr5 30243489 30243673 -172841859 - L1MA4 LINE L1 -8 6292 6109 30 0 0 0 chr5 30243821 30243851 -172841681 + AT_rich Low_complexity Low_complexity 1 30 0 422 295 62 53 chr5 30243970 30244197 -172841335 + MIR SINE MIR 34 262 0 300 291 0 12 chr5 30244820 30244906 -172840626 + L2 LINE L2 3227 3311 -2 1903 184 52 33 chr5 30245931 30246472 -172839060 - MLT2A2 LTR ERVL 0 554 4 430 321 14 69 chr5 30246533 30246810 -172838722 - MLT1J LTR MaLR -59 452 191 501 245 83 62 chr5 30246815 30247007 -172838525 + MSTD LTR MaLR 1 196 -169 1469 313 56 25 chr5 30247260 30247944 -172837588 + L2 LINE L2 1634 2338 -976 647 218 81 6 chr5 30248070 30248243 -172837289 + MSTD LTR MaLR 175 383 -2 367 281 56 56 chr5 30248256 30248434 -172837098 - MLT1J LTR MaLR -331 180 3 295 356 23 3 chr5 30248586 30248696 -172836836 + MIR SINE MIR 30 142 -66 27 81 0 0 chr5 30248960 30249022 -172836510 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr5 30249053 30249074 -172836458 + AT_rich Low_complexity Low_complexity 1 21 0 1577 319 70 26 chr5 30249238 30249999 -172835533 - L2 LINE L2 -985 2329 1536 263 276 28 62 chr5 30250140 30250285 -172835247 - L2 LINE L2 -956 2358 2219 1959 144 0 3 chr5 30250542 30250854 -172834678 - AluSq SINE Alu 0 311 1 241 94 113 19 chr5 30252784 30252837 -172832695 + MLT1I LTR MaLR 326 383 -26 21 57 0 0 chr5 30253093 30253128 -172832404 + AT_rich Low_complexity Low_complexity 1 35 0 1349 57 6 0 chr5 30253624 30253800 -172831732 + L1PA4 LINE L1 5971 6147 -8 2457 102 43 0 chr5 30254229 30254603 -172830929 - L1PA10 LINE L1 0 6168 5779 654 67 34 0 chr5 30254603 30254692 -172830840 + L1P4 LINE L1 5554 5645 -523 813 200 14 81 chr5 30254837 30255047 -172830485 + AluJo SINE Alu 87 282 -30 312 27 0 0 chr5 30255059 30255096 -172830436 + (CA)n Simple_repeat Simple_repeat 1 37 0 1498 194 33 14 chr5 30255618 30255983 -172829549 - L1MA6 LINE L1 -11 6289 5918 34 24 0 0 chr5 30257011 30257052 -172828480 + AT_rich Low_complexity Low_complexity 1 41 0 23 78 0 0 chr5 30257230 30257281 -172828251 + AT_rich Low_complexity Low_complexity 1 51 0 391 234 88 58 chr5 30259051 30259256 -172826276 - L2 LINE L2 -793 2521 2311 425 318 87 0 chr5 30259715 30259888 -172825644 + LTR16A1 LTR ERVL 201 388 -69 5065 180 35 17 chr5 30259912 30261002 -172824530 - L1MA6 LINE L1 -1 6299 5190 2317 177 26 71 chr5 30261027 30261798 -172823734 - L1MA6 LINE L1 -464 5836 5111 2291 121 0 3 chr5 30261798 30262111 -172823421 + AluSx SINE Alu 1 312 0 2317 177 26 71 chr5 30262111 30262262 -172823270 - L1MA6 LINE L1 -1189 5111 4955 811 191 0 0 chr5 30262263 30262410 -172823122 + L1MA6 LINE L1 4801 4947 -1199 192 97 0 0 chr5 30263517 30263548 -172821984 + (CA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr5 30263659 30263690 -172821842 + AT_rich Low_complexity Low_complexity 1 31 0 223 184 20 51 chr5 30264401 30264499 -172821033 + (TA)n Simple_repeat Simple_repeat 1 95 0 1109 192 0 33 chr5 30264744 30264984 -172820548 + AluJb SINE Alu 78 309 -3 40 0 0 0 chr5 30266041 30266081 -172819451 + AT_rich Low_complexity Low_complexity 1 40 0 968 232 42 83 chr5 30266140 30266935 -172818597 + MER4C LTR ERV1 1 465 0 1782 188 53 8 chr5 30267308 30267665 -172817867 + MLT2D LTR ERVL 2 374 -40 350 267 23 12 chr5 30267672 30267844 -172817688 + (TA)n Simple_repeat Simple_repeat 2 175 0 189 147 0 0 chr5 30268477 30268511 -172817021 + (TG)n Simple_repeat Simple_repeat 2 35 0 24 96 0 0 chr5 30268827 30268900 -172816632 + AT_rich Low_complexity Low_complexity 1 73 0 927 245 7 114 chr5 30269198 30269611 -172815921 - MLT2B1 LTR ERVL -53 467 99 1239 211 70 29 chr5 30269627 30269939 -172815593 + MER67C LTR ERV1 79 403 -307 255 331 76 7 chr5 30269946 30270091 -172815441 + MER67D LTR ERV1 356 510 -4 2323 38 14 3 chr5 30270458 30270749 -172814783 - AluY SINE Alu -17 294 1 4195 224 16 1 chr5 30270980 30271844 -172813688 - L1M1 LINE L1 -6676 889 13 9623 48 10 0 chr5 30272273 30273767 -172811765 + L1P2 LINE L1 4152 5657 -498 14088 193 37 16 chr5 30273872 30277411 -172808121 + L1MA3 LINE L1 840 4457 -3108 6323 147 11 19 chr5 30277400 30278860 -172806672 + L1MA3 LINE L1 6281 7723 -1 * 23 68 0 0 chr5 30279123 30279167 -172806365 + AT_rich Low_complexity Low_complexity 1 44 0 5666 80 4 1 chr5 30279171 30279920 -172805612 - L1PA7 LINE L1 -3 6151 5401 1346 254 24 46 chr5 30280457 30280958 -172804574 + MLT1D LTR MaLR 16 505 0 25 83 0 0 chr5 30281093 30281153 -172804379 + AT_rich Low_complexity Low_complexity 1 60 0 298 207 24 18 chr5 30281844 30282018 -172803514 + (TA)n Simple_repeat Simple_repeat 1 175 0 23 33 0 0 chr5 30282556 30282586 -172802946 + AT_rich Low_complexity Low_complexity 1 30 0 207 69 0 0 chr5 30282815 30282844 -172802688 + (CA)n Simple_repeat Simple_repeat 2 30 0 402 248 39 26 chr5 30282922 30283075 -172802457 + L1ME1 LINE L1 6007 6161 -5 24 53 0 0 chr5 30283232 30283270 -172802262 + AT_rich Low_complexity Low_complexity 1 38 0 181 75 50 0 chr5 30283511 30283551 -172801981 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 367 205 46 7 chr5 30283551 30283702 -172801830 + (TA)n Simple_repeat Simple_repeat 1 157 0 3327 134 24 7 chr5 30283794 30284460 -172801072 + LTR1 LTR ERV1 17 785 0 2132 128 7 0 chr5 30284783 30285089 -172800443 - AluY SINE Alu -3 308 1 21 36 0 0 chr5 30285809 30285837 -172799695 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 30287136 30287166 -172798366 + AT_rich Low_complexity Low_complexity 1 30 0 347 66 0 82 chr5 30287458 30287519 -172798013 - MLT2A1 LTR ERVL 0 444 389 5513 156 50 21 chr5 30287537 30288608 -172796924 - HERVL-A1 LTR ERVL -155 5499 4399 * 17752 83 16 12 chr5 30288603 30291010 -172794522 - HERVL-A1 LTR ERVL -3238 2416 1 3121 78 32 7 chr5 30291010 30291058 -172794474 - MLT2A1 LTR ERVL 0 444 399 333 0 0 0 chr5 30291058 30291095 -172794437 + (CA)n Simple_repeat Simple_repeat 2 38 0 3121 78 32 7 chr5 30291095 30291479 -172794053 - MLT2A1 LTR ERVL -45 399 1 28 79 0 0 chr5 30292256 30292319 -172793213 + AT_rich Low_complexity Low_complexity 1 63 0 1987 121 39 0 chr5 30292849 30293131 -172792401 + AluSq SINE Alu 1 293 -20 423 0 0 0 chr5 30293272 30293319 -172792213 + (TG)n Simple_repeat Simple_repeat 2 48 0 2542 56 0 0 chr5 30294138 30294444 -172791088 + AluY SINE Alu 1 306 -5 241 277 138 44 chr5 30294975 30295134 -172790398 + L2 LINE L2 2918 3091 -181 22 0 0 0 chr5 30296591 30296613 -172788919 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 30296653 30296675 -172788857 + AT_rich Low_complexity Low_complexity 1 22 0 2122 264 45 65 chr5 30297507 30298584 -172786948 - L1M4c LINE L1 -4440 2385 1287 1998 149 3 0 chr5 30298584 30298880 -172786652 + AluSx SINE Alu 12 308 -4 2122 264 45 65 chr5 30298880 30299021 -172786511 - L1M4c LINE L1 -5538 1287 1145 1547 210 40 0 chr5 30299021 30299321 -172786211 + AluJo SINE Alu 1 312 0 2122 264 45 65 chr5 30299321 30299426 -172786106 - L1M4c LINE L1 -5680 1145 950 5909 92 13 2 chr5 30299439 30300791 -172784741 - L1PA8A LINE L1 -2 6129 4768 7057 133 23 3 chr5 30300792 30301939 -172783593 + L1PA8A LINE L1 3624 4793 -1353 360 261 31 77 chr5 30301933 30302128 -172783404 - L1M4c LINE L1 -5593 949 764 * 5600 251 36 10 chr5 30302237 30303578 -172781954 - ERVL-B3 LTR ERVL -4388 1376 1 2734 193 37 17 chr5 30303578 30303625 -172781907 - MLT2B3 LTR ERVL 0 554 509 459 0 0 0 chr5 30303625 30303676 -172781856 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 2734 193 37 17 chr5 30303676 30304168 -172781364 - MLT2B3 LTR ERVL -45 509 4 22 35 0 0 chr5 30304186 30304215 -172781317 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 30304298 30304322 -172781210 + AT_rich Low_complexity Low_complexity 1 24 0 935 81 22 0 chr5 30305941 30306077 -172779455 + L1PA10 LINE L1 6021 6159 -9 23 68 0 0 chr5 30306280 30306324 -172779208 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr5 30306426 30306470 -172779062 + AT_rich Low_complexity Low_complexity 1 44 0 34664 70 14 1 chr5 30307405 30312013 -172773519 + L1P LINE L1 11 4675 -1471 5353 85 33 1 chr5 30312125 30312914 -172772618 - HERVL-A1 LTR ERVL -4840 814 1 2829 77 53 7 chr5 30312914 30312962 -172772570 - MLT2A1 LTR ERVL 0 444 400 333 0 0 0 chr5 30312962 30312999 -172772533 + (CA)n Simple_repeat Simple_repeat 2 38 0 2829 77 53 7 chr5 30312999 30313368 -172772164 - MLT2A1 LTR ERVL -44 400 8 4054 237 37 5 chr5 30313565 30314798 -172770734 - L1 LINE L1 -2660 3486 2214 274 325 75 20 chr5 30315099 30315299 -172770233 + LTR16C LTR ERVL 279 489 -2 21 36 0 0 chr5 30316226 30316254 -172769278 + AT_rich Low_complexity Low_complexity 1 28 0 603 177 94 22 chr5 30316362 30316543 -172768989 + MER3 DNA MER1_type 7 200 -9 4423 158 80 8 chr5 30316659 30317811 -172767721 - L1PB1 LINE L1 -66 6085 4849 1956 129 7 10 chr5 30317911 30318214 -172767318 - AluSx SINE Alu -10 302 1 864 137 172 20 chr5 30318215 30318419 -172767113 - L1MB2 LINE L1 -343 5828 5594 321 309 67 11 chr5 30318696 30318874 -172766658 - L1M4 LINE L1 -2154 3992 3805 1131 240 58 33 chr5 30319457 30319812 -172765720 + MLT1A1 LTR MaLR 3 365 0 419 173 55 16 chr5 30320392 30320519 -172765013 - Alu SINE Alu -2 308 177 187 340 87 49 chr5 30320784 30321018 -172764514 + L2 LINE L2 1645 1869 -1445 255 61 0 0 chr5 30321018 30321051 -172764481 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2062 133 3 0 chr5 30321057 30321343 -172764189 - AluSg SINE Alu -23 287 1 187 340 87 49 chr5 30321343 30321492 -172764040 + L2 LINE L2 1873 2050 -1264 193 352 38 19 chr5 30321992 30322097 -172763435 + L2 LINE L2 2687 2793 -521 878 262 75 44 chr5 30322169 30322554 -172762978 + MLT2C1 LTR ERVL 1 397 0 282 29 0 0 chr5 30322577 30322612 -172762920 + (TG)n Simple_repeat Simple_repeat 2 36 0 2109 97 0 45 chr5 30322614 30322925 -172762607 - AluSc SINE Alu -12 297 1 1293 288 74 30 chr5 30322994 30323209 -172762323 + ERVL-C1 LTR ERVL 90 294 -5470 1716 163 9 47 chr5 30323209 30323528 -172762004 - AluJb SINE Alu -5 307 1 1293 288 74 30 chr5 30323528 30324006 -172761526 + ERVL-C1 LTR ERVL 294 750 -5014 1751 144 60 41 chr5 30324006 30324374 -172761158 - THE1C LTR MaLR 0 375 1 1293 288 74 30 chr5 30324374 30324688 -172760844 + ERVL-C1 LTR ERVL 750 1213 -4551 2010 189 14 57 chr5 30324690 30325128 -172760404 + MSTB1 LTR MaLR 1 419 -13 5010 255 60 68 chr5 30325175 30327623 -172757909 + ERVL-C1 LTR ERVL 1259 3807 -1957 24 77 0 0 chr5 30327661 30327713 -172757819 + AT_rich Low_complexity Low_complexity 1 52 0 322 248 26 137 chr5 30328710 30328761 -172756771 + MLT1L LTR MaLR 408 463 -152 2227 136 16 19 chr5 30328761 30329137 -172756395 - THE1C LTR MaLR 0 375 1 322 248 26 137 chr5 30329137 30329319 -172756213 + MLT1L LTR MaLR 463 615 0 237 242 62 39 chr5 30329936 30330064 -172755468 - L1M4 LINE L1 -1785 4361 4231 2072 112 0 29 chr5 30330315 30330628 -172754904 - AluSq SINE Alu -9 304 1 331 148 0 0 chr5 30332017 30332071 -172753461 + L1MA7 LINE L1 6045 6098 -193 829 190 45 15 chr5 30332116 30332316 -172753216 + L1MA7 LINE L1 6086 6291 0 496 258 14 120 chr5 30332982 30333199 -172752333 + L2 LINE L2 2772 2965 -349 329 326 0 0 chr5 30333687 30333782 -172751750 + MER69A DNA AcHobo 1 95 -82 215 0 67 0 chr5 30333792 30333822 -172751710 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 555 351 94 23 chr5 30334590 30335068 -172750464 + HAL1 LINE L1 211 722 -1785 306 337 63 11 chr5 30335158 30335333 -172750199 + HAL1 LINE L1 1295 1478 -1029 1819 141 3 21 chr5 30335390 30335680 -172749852 - THE1-int LTR MaLR -631 949 665 4573 115 2 2 chr5 30335702 30336337 -172749195 + THE1C-int LTR MaLR 946 1580 0 2311 144 0 18 chr5 30336337 30336719 -172748813 + THE1C LTR MaLR 1 375 0 1382 222 50 58 chr5 30336799 30337196 -172748336 - MSTD LTR MaLR 0 396 3 288 171 86 0 chr5 30337676 30337746 -172747786 - MSTC LTR MaLR -17 411 336 372 43 0 0 chr5 30337756 30337802 -172747730 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 30338187 30338208 -172747324 + AT_rich Low_complexity Low_complexity 1 21 0 405 337 15 7 chr5 30338581 30338760 -172746772 + MLT1G1 LTR MaLR 248 356 -186 251 192 0 19 chr5 30338828 30338880 -172746652 + MLT1G1 LTR MaLR 490 540 -2 213 347 40 52 chr5 30339032 30339205 -172746327 + MIR SINE MIR 90 260 -2 412 181 0 0 chr5 30339313 30339385 -172746147 - Tigger1 DNA MER2_type 0 2418 2347 2218 255 61 24 chr5 30339391 30340092 -172745440 + MER50 LTR ERV1 8 734 0 11972 148 54 40 chr5 30340093 30341883 -172743649 - Tigger1 DNA MER2_type -71 2347 517 1834 169 24 0 chr5 30341883 30342178 -172743354 - AluSx SINE Alu -10 302 1 11972 148 54 40 chr5 30342178 30342698 -172742834 - Tigger1 DNA MER2_type -1901 517 6 22 80 0 0 chr5 30344221 30344271 -172741261 + AT_rich Low_complexity Low_complexity 1 50 0 744 179 134 6 chr5 30344314 30344493 -172741039 + MLT1B LTR MaLR 1 202 -188 710 233 24 63 chr5 30344485 30344648 -172740884 + MLT2D LTR ERVL 217 372 -42 * 408 20 0 0 chr5 30344648 30344697 -172740835 + (CA)n Simple_repeat Simple_repeat 2 50 0 710 233 24 63 chr5 30344697 30344739 -172740793 + MLT2D LTR ERVL 372 414 0 189 147 0 0 chr5 30344739 30344773 -172740759 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 1478 186 27 10 chr5 30345059 30345355 -172740177 + AluJb SINE Alu 5 305 -7 8463 29 1 0 chr5 30346308 30347324 -172738208 - L1PA4 LINE L1 -1490 4656 3640 7472 30 5 0 chr5 30347324 30348810 -172736722 + L1PA4 LINE L1 4666 6155 0 26 50 0 0 chr5 30349696 30349736 -172735796 + AT_rich Low_complexity Low_complexity 1 40 0 314 294 0 0 chr5 30351092 30351160 -172734372 - tRNA-Glu-GAG tRNA tRNA 0 75 8 350 199 84 96 chr5 30351598 30351764 -172733768 - LTR48 LTR ERV1 0 787 624 207 0 0 0 chr5 30351771 30351794 -172733738 + (T)n Simple_repeat Simple_repeat 1 23 0 1046 201 65 77 chr5 30351832 30352185 -172733347 - LTR49 LTR ERV1 -246 349 1 242 108 0 0 chr5 30355065 30355102 -172730430 + L1MCa LINE L1 1115 1151 -5275 37 0 0 0 chr5 30355142 30355179 -172730353 + AT_rich Low_complexity Low_complexity 1 37 0 1773 202 26 21 chr5 30356546 30356932 -172728600 + MLT1B LTR MaLR 3 390 0 312 27 0 0 chr5 30357436 30357473 -172728059 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1726 71 4 8 chr5 30357836 30358076 -172727456 - L1PA8 LINE L1 0 6172 5934 22 0 0 0 chr5 30358409 30358431 -172727101 + AT_rich Low_complexity Low_complexity 1 22 0 1679 193 36 14 chr5 30359769 30360126 -172725406 - MLT1A1 LTR MaLR 0 365 1 254 294 136 17 chr5 30360402 30360579 -172724953 - L2 LINE L2 -654 2660 2463 278 385 36 15 chr5 30360583 30360778 -172724754 - L2 LINE L2 -1227 2087 1889 578 221 100 122 chr5 30361109 30361520 -172724012 + MER93a LTR ERV1 1 402 0 23 0 0 0 chr5 30361520 30361543 -172723989 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr5 30361740 30361775 -172723757 + AT_rich Low_complexity Low_complexity 1 35 0 357 24 0 0 chr5 30362299 30362341 -172723191 + (TG)n Simple_repeat Simple_repeat 1 42 0 2917 200 30 12 chr5 30362367 30362961 -172722571 + MER6A DNA MER2_type 1 605 0 1862 117 71 0 chr5 30363154 30363435 -172722097 - AluSg SINE Alu -9 301 1 496 375 19 16 chr5 30364369 30364686 -172720846 + HERV16 LTR ERVL 2574 2891 -2105 251 125 47 31 chr5 30364688 30364752 -172720780 + T-rich Low_complexity Low_complexity 3 67 0 842 26 61 0 chr5 30364753 30364868 -172720664 - L1PA4 LINE L1 -3 6152 6031 378 225 56 0 chr5 30364973 30365062 -172720470 - MER69 DNA AcHobo -8 2518 2425 5553 155 62 13 chr5 30365080 30366198 -172719334 + Tigger3b DNA MER2_type 41 1231 0 421 307 23 17 chr5 30367561 30367737 -172717795 - MER45A DNA AcHobo -1 177 1 188 301 55 0 chr5 30369285 30369358 -172716174 + L2 LINE L2 2702 2778 -536 582 342 108 36 chr5 30369433 30369907 -172715625 - L2 LINE L2 -2 3311 2804 1154 112 0 22 chr5 30370385 30370563 -172714969 + MSTA-int LTR MaLR 1313 1486 -94 1572 174 174 8 chr5 30370730 30371097 -172714435 + MSTA LTR MaLR 1 428 0 8434 164 8 43 chr5 30371099 30372734 -172712798 + MSTA-int LTR MaLR 3 1580 0 1903 165 131 8 chr5 30372734 30373115 -172712417 + MSTA LTR MaLR 1 428 0 636 221 21 0 chr5 30373293 30373433 -172712099 - L1PB4 LINE L1 -6 6150 6008 1975 236 40 2 chr5 30373596 30374040 -172711492 + LTR53 LTR ERVL 28 488 -31 236 328 0 0 chr5 30375475 30375539 -172709993 - MER20B DNA MER1_type -634 149 86 402 261 155 18 chr5 30377395 30377621 -172707911 - LTR50 LTR ERVL -527 268 12 1933 134 0 3 chr5 30377811 30378094 -172707438 + AluSg SINE Alu 7 288 -22 2133 105 0 43 chr5 30378443 30378767 -172706765 + AluSx SINE Alu 1 310 -2 1962 177 21 8 chr5 30378787 30379172 -172706360 - L1MA6 LINE L1 -9 6291 5902 30 27 0 0 chr5 30379261 30379298 -172706234 + AT_rich Low_complexity Low_complexity 1 37 0 2099 118 0 3 chr5 30379524 30379845 -172705687 + AluSx SINE Alu 1 320 0 2426 76 3 3 chr5 30380098 30380399 -172705133 + AluSp SINE Alu 1 301 -12 310 191 169 0 chr5 30380633 30380722 -172704810 - L1ME2 LINE L1 -257 5907 5804 575 140 50 0 chr5 30380839 30380939 -172704593 - HERVL74 LTR ERVL -2815 2870 2766 2458 128 186 20 chr5 30380939 30381449 -172704083 - LTR49 LTR ERV1 0 595 1 3713 251 57 73 chr5 30381450 30383113 -172702419 - HERVL74 LTR ERVL -2917 2768 1132 400 221 23 0 chr5 30383182 30383268 -172702264 - HERVL74 LTR ERVL -2623 933 846 2730 234 19 27 chr5 30383291 30383966 -172701566 - HERVL74 LTR ERVL -2883 673 4 1588 230 26 15 chr5 30383992 30384383 -172701149 - LTR52 LTR ERVL -26 395 1 27 81 0 0 chr5 30384944 30385006 -172700526 + AT_rich Low_complexity Low_complexity 1 62 0 854 185 56 26 chr5 30385616 30385811 -172699721 - MER3 DNA MER1_type -2 207 7 21 36 0 0 chr5 30385919 30385947 -172699585 + AT_rich Low_complexity Low_complexity 1 28 0 411 317 49 19 chr5 30386885 30387090 -172698442 - LTR16C LTR ERVL -2 489 279 324 218 24 73 chr5 30387982 30388106 -172697426 - L1ME2 LINE L1 -385 5777 5660 1397 256 180 42 chr5 30388166 30388839 -172696693 - LTR41 LTR ERVL -6 767 2 537 285 21 11 chr5 30390405 30390591 -172694941 - LTR33 LTR ERVL -8 513 326 26 50 0 0 chr5 30390878 30390918 -172694614 + AT_rich Low_complexity Low_complexity 1 40 0 230 360 10 0 chr5 30391075 30391175 -172694357 - LTR33 LTR ERVL -55 466 366 321 225 14 0 chr5 30391408 30391479 -172694053 - LTR33 LTR ERVL -449 72 1 189 74 0 0 chr5 30393379 30393406 -172692126 + (CA)n Simple_repeat Simple_repeat 2 28 0 561 193 18 0 chr5 30393705 30393819 -172691713 - MER46C DNA MER2_type -144 194 79 357 314 50 7 chr5 30393998 30394138 -172691394 - MIR SINE MIR -114 148 3 2054 119 0 29 chr5 30394157 30394469 -172691063 + AluSx SINE Alu 1 303 -9 226 229 21 0 chr5 30394536 30394584 -172690948 + CT-rich Low_complexity Low_complexity 2 50 0 22 35 0 0 chr5 30395151 30395180 -172690352 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 30395605 30395634 -172689898 + AT_rich Low_complexity Low_complexity 1 29 0 635 270 90 4 chr5 30395683 30395950 -172689582 + L1ME1 LINE L1 5876 6165 -1 402 306 46 32 chr5 30396304 30396677 -172688855 - L1MC4 LINE L1 -548 7494 7117 180 77 0 0 chr5 30396817 30396843 -172688689 + (CA)n Simple_repeat Simple_repeat 1 26 0 532 295 53 66 chr5 30396935 30397225 -172688307 - L1MC4 LINE L1 -966 6819 6641 848 298 84 17 chr5 30397724 30398187 -172687345 - L1MC4 LINE L1 -1903 5905 5412 252 176 103 7 chr5 30398302 30398438 -172687094 + (TA)n Simple_repeat Simple_repeat 2 150 0 593 372 42 21 chr5 30398909 30399334 -172686198 - MERVL LTR ERVL -875 4610 4177 1913 152 0 7 chr5 30401077 30401366 -172684166 + AluSg SINE Alu 1 287 -23 1677 143 91 20 chr5 30401935 30402285 -172683247 - THE1C LTR MaLR 0 375 1 209 125 25 0 chr5 30403319 30403359 -172682173 + (TA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 30404245 30404273 -172681259 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 30404629 30404659 -172680873 + AT_rich Low_complexity Low_complexity 1 30 0 466 310 61 56 chr5 30405145 30405358 -172680174 + LTR33 LTR ERVL 11 224 -297 1746 214 119 35 chr5 30406876 30407311 -172678221 - MER70A LTR ERVL 0 472 1 7107 54 10 0 chr5 30407735 30409095 -172676437 - L1PA5 LINE L1 0 6154 4788 32 62 0 0 chr5 30412037 30412085 -172673447 + GC_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr5 30414057 30414081 -172671451 + GC_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 30415402 30415427 -172670105 + AT_rich Low_complexity Low_complexity 1 25 0 305 240 188 52 chr5 30415504 30415754 -172669778 + L1 LINE L1 3092 3375 -2771 234 223 29 50 chr5 30416310 30416449 -172669083 + (CACAA)n Simple_repeat Simple_repeat 4 139 0 205 336 23 8 chr5 30416503 30416634 -172668898 + (CATA)n Simple_repeat Simple_repeat 2 134 0 437 307 23 17 chr5 30417904 30418080 -172667452 + MER45A DNA AcHobo 1 177 -1 5414 153 68 13 chr5 30419449 30420561 -172664971 - Tigger3b DNA MER2_type 0 1231 41 375 218 58 0 chr5 30420581 30420668 -172664864 + MER69 DNA AcHobo 2427 2518 -8 842 26 61 0 chr5 30420773 30420952 -172664580 + L1PA4 LINE L1 6031 6216 0 481 375 19 16 chr5 30420954 30421271 -172664261 - HERV16 LTR ERVL -2105 2891 2574 1961 115 69 0 chr5 30422205 30422493 -172663039 + AluSg SINE Alu 1 308 -2 3025 193 29 12 chr5 30422685 30423280 -172662252 - MER6A DNA MER2_type 0 605 1 351 65 0 0 chr5 30423304 30423350 -172662182 + (CA)n Simple_repeat Simple_repeat 1 46 0 23 33 0 0 chr5 30423881 30423911 -172661621 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr5 30424092 30424131 -172661401 + AT_rich Low_complexity Low_complexity 1 39 0 573 224 100 122 chr5 30424131 30424542 -172660990 - MER93a LTR ERV1 0 402 1 261 385 36 15 chr5 30424873 30425068 -172660464 + L2 LINE L2 1889 2087 -1227 243 309 129 17 chr5 30425072 30425250 -172660282 + L2 LINE L2 2463 2660 -654 1661 194 39 14 chr5 30425526 30425882 -172659650 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 30427220 30427242 -172658290 + AT_rich Low_complexity Low_complexity 1 22 0 1735 67 4 8 chr5 30427575 30427813 -172657719 + L1PA8 LINE L1 5934 6170 -2 276 30 0 0 chr5 30428176 30428209 -172657323 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1759 215 23 18 chr5 30428713 30429099 -172656433 - MLT1B LTR MaLR 0 390 3 23 0 0 0 chr5 30430462 30430485 -172655047 + AT_rich Low_complexity Low_complexity 1 23 0 242 108 0 0 chr5 30430525 30430562 -172654970 - L1MCa LINE L1 -5275 1151 1115 1066 201 65 77 chr5 30433447 30433800 -172651732 + LTR49 LTR ERV1 1 349 -246 346 199 84 96 chr5 30433861 30434027 -172651505 + LTR48 LTR ERV1 624 787 0 250 325 26 40 chr5 30434092 30434243 -172651289 + MER57-int LTR ERV1 1657 1805 -5732 315 294 0 0 chr5 30434465 30434533 -172650999 + tRNA-Glu-GAG tRNA tRNA 8 75 0 26 50 0 0 chr5 30435888 30435928 -172649604 + AT_rich Low_complexity Low_complexity 1 40 0 7327 34 5 0 chr5 30436813 30438294 -172647238 - L1PA4 LINE L1 0 6155 4666 8476 28 1 0 chr5 30438294 30439310 -172646222 + L1PA4 LINE L1 3640 4656 -1490 1500 181 27 10 chr5 30440264 30440556 -172644976 - AluJb SINE Alu -7 305 9 189 147 0 0 chr5 30440847 30440881 -172644651 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 710 233 24 63 chr5 30440881 30440923 -172644609 - MLT2D LTR ERVL 0 414 372 405 0 0 0 chr5 30440923 30440968 -172644564 + (TG)n Simple_repeat Simple_repeat 2 46 0 710 233 24 63 chr5 30440968 30441131 -172644401 - MLT2D LTR ERVL -42 372 217 * 733 179 134 6 chr5 30441123 30441302 -172644230 - MLT1B LTR MaLR -188 202 1 22 80 0 0 chr5 30441345 30441395 -172644137 + AT_rich Low_complexity Low_complexity 1 50 0 12022 148 54 38 chr5 30442921 30443439 -172642093 + Tigger1 DNA MER2_type 6 514 -1904 1854 172 24 0 chr5 30443439 30443736 -172641796 + AluSx SINE Alu 1 304 -8 12022 148 54 38 chr5 30443736 30445523 -172640009 + Tigger1 DNA MER2_type 514 2347 -71 2227 249 62 25 chr5 30445531 30446225 -172639307 - MER50 LTR ERV1 -7 727 8 413 181 0 0 chr5 30446231 30446303 -172639229 + Tigger1 DNA MER2_type 2347 2418 0 197 317 78 54 chr5 30446411 30446578 -172638954 - MIR SINE MIR -2 260 90 258 173 0 19 chr5 30446730 30446782 -172638750 - MLT1G1 LTR MaLR -2 540 490 402 336 15 7 chr5 30446850 30447029 -172638503 - MLT1G1 LTR MaLR -186 391 248 21 0 0 0 chr5 30447402 30447423 -172638109 + AT_rich Low_complexity Low_complexity 1 21 0 318 50 0 0 chr5 30447808 30447848 -172637684 + (CA)n Simple_repeat Simple_repeat 1 40 0 378 175 26 13 chr5 30447858 30447950 -172637582 + MSTC LTR MaLR 301 411 -2 1433 221 51 39 chr5 30448413 30448802 -172636730 + MSTD LTR MaLR 3 396 0 2314 147 0 18 chr5 30448882 30449264 -172636268 - THE1C LTR MaLR 0 375 1 9459 122 40 40 chr5 30449264 30450845 -172634687 - THE1C-int LTR MaLR 0 1580 1 2345 114 27 11 chr5 30450845 30451214 -172634318 - THE1C LTR MaLR 0 375 1 23 54 0 0 chr5 30451317 30451354 -172634178 + AT_rich Low_complexity Low_complexity 1 37 0 902 251 146 69 chr5 30452080 30452678 -172632854 - LTR48B LTR ERV1 0 644 1 720 251 60 8 chr5 30452997 30453232 -172632300 - LTR56 LTR ERV1 0 445 199 750 171 54 93 chr5 30453249 30453507 -172632025 - LTR56 LTR ERV1 -197 248 1 196 220 100 0 chr5 30453525 30453575 -172631957 + MIR SINE MIR 120 174 -88 702 187 0 43 chr5 30453633 30453772 -172631760 + FLAM_C SINE Alu 1 133 0 1483 129 0 5 chr5 30453812 30454036 -172631496 - LOR1b LTR ERV1 -238 223 1 877 298 85 39 chr5 30455101 30455817 -172629715 - HAL1 LINE L1 -7 2500 1752 248 182 0 0 chr5 30455824 30455868 -172629664 - MLT2D LTR ERVL -2 412 369 2224 173 16 42 chr5 30455886 30456383 -172629149 + LTR22B LTR ERVK 5 488 -4 393 75 0 0 chr5 30456393 30456446 -172629086 + (TG)n Simple_repeat Simple_repeat 2 54 0 671 219 16 0 chr5 30456480 30456608 -172628924 - MLT2B1 LTR ERVL -63 457 328 5175 228 121 38 chr5 30456608 30458078 -172627454 - MER52A LTR ERV1 0 1755 269 573 220 145 66 chr5 30458129 30458356 -172627176 - MLT2B1 LTR ERVL -265 255 11 2937 160 30 6 chr5 30458356 30458887 -172626645 + L1MA4 LINE L1 5700 6243 -57 459 313 24 37 chr5 30458932 30459178 -172626354 - HAL1 LINE L1 -814 1693 1451 301 337 63 11 chr5 30459186 30459361 -172626171 - HAL1 LINE L1 -1029 1478 1295 530 359 99 22 chr5 30459451 30459995 -172625537 - HAL1 LINE L1 -1785 722 137 215 0 67 0 chr5 30460697 30460727 -172624805 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 319 326 0 0 chr5 30460737 30460832 -172624700 - MER69A DNA AcHobo -82 95 1 498 258 14 120 chr5 30461321 30461538 -172623994 - L2 LINE L2 -349 2965 2772 185 279 0 0 chr5 30461636 30461679 -172623853 - L2 LINE L2 -1801 1513 1471 807 190 45 15 chr5 30462204 30462404 -172623128 - L1MA7 LINE L1 0 6291 6086 327 148 0 0 chr5 30462449 30462503 -172623029 - L1MA7 LINE L1 -193 6098 6045 2084 115 0 29 chr5 30463891 30464204 -172621328 + AluSq SINE Alu 1 304 -9 374 242 62 39 chr5 30464455 30464583 -172620949 + L1M4 LINE L1 4231 4361 -1785 322 248 26 137 chr5 30465200 30465382 -172620150 - MLT1L LTR MaLR 0 615 463 2227 136 16 19 chr5 30465382 30465758 -172619774 + THE1C LTR MaLR 1 375 0 322 248 26 137 chr5 30465758 30465809 -172619723 - MLT1L LTR MaLR -152 463 408 24 77 0 0 chr5 30466806 30466858 -172618674 + AT_rich Low_complexity Low_complexity 1 52 0 5040 251 63 69 chr5 30466896 30469340 -172616192 - ERVL-C1 LTR ERVL -1957 3807 1259 1997 192 14 57 chr5 30469387 30469825 -172615707 - MSTB1 LTR MaLR -13 419 1 1318 292 73 29 chr5 30469827 30470140 -172615392 - ERVL-C1 LTR ERVL -4551 1213 915 1751 144 60 41 chr5 30470140 30470508 -172615024 + THE1C LTR MaLR 1 375 0 1318 292 73 29 chr5 30470508 30470986 -172614546 - ERVL-C1 LTR ERVL -4849 915 294 1732 160 9 47 chr5 30470986 30471305 -172614227 + AluJb SINE Alu 1 307 -5 1318 292 73 29 chr5 30471305 30471520 -172614012 - ERVL-C1 LTR ERVL -5470 294 90 2109 97 0 45 chr5 30471589 30471900 -172613632 + AluSc SINE Alu 1 297 -12 282 29 0 0 chr5 30471902 30471937 -172613595 + (CA)n Simple_repeat Simple_repeat 2 36 0 893 260 75 44 chr5 30471960 30472345 -172613187 - MLT2C1 LTR ERVL 0 397 1 193 352 38 19 chr5 30472417 30472522 -172613010 - L2 LINE L2 -521 2793 2687 228 334 86 52 chr5 30473022 30473171 -172612361 - L2 LINE L2 -1264 2050 1908 1998 136 4 0 chr5 30473171 30473506 -172612026 + AluSg SINE Alu 1 336 0 228 334 86 52 chr5 30473506 30473762 -172611770 - L2 LINE L2 -1406 1908 1630 205 265 216 20 chr5 30473785 30473887 -172611645 + L2 LINE L2 3191 3312 -1 30 0 0 0 chr5 30474059 30474089 -172611443 + AT_rich Low_complexity Low_complexity 1 30 0 218 310 0 0 chr5 30474378 30474436 -172611096 + L2 LINE L2 3001 3058 -214 23 33 0 0 chr5 30476129 30476159 -172609373 + AT_rich Low_complexity Low_complexity 1 30 0 2337 91 3 0 chr5 30476761 30477058 -172608474 - AluSp SINE Alu -15 298 1 183 42 0 0 chr5 30477163 30477187 -172608345 + (T)n Simple_repeat Simple_repeat 1 24 0 2130 134 0 0 chr5 30477766 30478073 -172607459 + AluSg SINE Alu 1 307 -3 8209 219 69 43 chr5 30478389 30480189 -172605343 - L1MC3 LINE L1 0 9204 7452 1919 106 58 0 chr5 30480189 30480481 -172605051 - AluSg SINE Alu -1 309 1 8209 219 69 43 chr5 30480481 30480503 -172605029 - L1MC3 LINE L1 -1752 7452 7432 2450 63 0 3 chr5 30480503 30480803 -172604729 - AluY SINE Alu -12 299 1 8209 219 69 43 chr5 30480803 30481637 -172603895 - L1MC3 LINE L1 -1772 7432 6478 1711 202 91 28 chr5 30481637 30482098 -172603434 + LTR2B LTR ERV1 1 490 0 8209 219 69 43 chr5 30482098 30482190 -172603342 - L1MC3 LINE L1 -2726 6478 6390 5005 285 48 17 chr5 30482164 30484327 -172601205 - L1MC3 LINE L1 -1774 5791 3561 * 248 230 40 0 chr5 30484329 30484403 -172601129 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 701 277 78 42 chr5 30484425 30485001 -172600531 - L1MC3 LINE L1 -4263 3483 2802 615 256 92 56 chr5 30485038 30485288 -172600244 - L1MC3 LINE L1 -5255 1791 1533 500 297 48 0 chr5 30485566 30485731 -172599801 - MLT1F1 LTR MaLR -385 182 10 183 80 0 0 chr5 30486194 30486219 -172599313 + (CA)n Simple_repeat Simple_repeat 2 26 0 1493 215 32 24 chr5 30486453 30486692 -172598840 - L1MB8 LINE L1 -2 6176 5931 2077 116 3 3 chr5 30486692 30486986 -172598546 - AluSx SINE Alu -18 294 1 1493 215 32 24 chr5 30486986 30487122 -172598410 - L1MB8 LINE L1 -247 5931 5798 497 221 66 22 chr5 30487148 30487329 -172598203 - L1M4 LINE L1 -3782 3175 2987 * 4415 275 68 45 chr5 30487324 30487472 -172598060 - L1M4 LINE L1 -4550 2409 2266 1986 96 30 4 chr5 30487472 30487780 -172597752 - AluSg SINE Alu 0 318 4 4415 275 68 45 chr5 30487780 30488315 -172597217 - L1M4 LINE L1 -4693 2266 1745 2091 107 0 0 chr5 30488315 30488630 -172596902 - AluSc SINE Alu 0 315 1 4415 275 68 45 chr5 30488630 30490290 -172595242 - L1M4 LINE L1 -5214 1745 11 262 391 77 6 chr5 30490850 30491006 -172594526 - MIR3 SINE MIR -38 170 4 26 0 0 0 chr5 30491495 30491521 -172594011 + AT_rich Low_complexity Low_complexity 1 26 0 826 312 54 10 chr5 30491860 30492174 -172593358 - MER69 DNA AcHobo -2198 328 1 181 376 65 0 chr5 30492429 30492522 -172593010 + L2 LINE L2 2716 2814 -500 251 260 156 10 chr5 30492847 30492943 -172592589 + L2 LINE L2 3163 3272 0 7210 171 40 9 chr5 30493105 30494422 -172591110 - Tigger1 DNA MER2_type 0 2418 1061 3122 153 33 0 chr5 30496753 30497294 -172588238 - Tigger1 DNA MER2_type -1339 1079 521 356 135 11 56 chr5 30497295 30497384 -172588148 - L1PA16 LINE L1 -2 6164 6080 274 330 36 9 chr5 30497384 30497496 -172588036 + L2 LINE L2 3196 3310 -3 13055 202 43 8 chr5 30497517 30502680 -172582852 - L1PB1 LINE L1 -5 6862 1517 2096 143 39 22 chr5 30502680 30502879 -172582653 - THE1B LTR MaLR 0 364 155 2344 38 0 3 chr5 30502879 30503169 -172582363 - L1PA2 LINE L1 0 6155 5867 2096 143 39 22 chr5 30503169 30503327 -172582205 - THE1B LTR MaLR -209 155 1 9066 159 10 5 chr5 30503327 30504838 -172580694 - L1PB1 LINE L1 -5342 1521 3 2762 182 19 17 chr5 30504849 30505382 -172580150 - Tigger1 DNA MER2_type -1884 534 1 1350 194 70 65 chr5 30505567 30505954 -172579578 + MLT1B LTR MaLR 1 389 -1 27 81 0 0 chr5 30506049 30506111 -172579421 + AT_rich Low_complexity Low_complexity 1 62 0 230 207 96 111 chr5 30506775 30507046 -172578486 - L1M4 LINE L1 -1484 4662 4396 2287 166 60 66 chr5 30507250 30507617 -172577915 - L1MB2 LINE L1 -2 6169 5805 1978 133 0 10 chr5 30507617 30507945 -172577587 - AluSx SINE Alu 0 312 1 2287 166 60 66 chr5 30507945 30508156 -172577376 - L1MB2 LINE L1 -366 5805 5594 272 315 99 23 chr5 30508140 30508613 -172576919 - L1M4 LINE L1 -1822 4324 3816 * 980 296 32 20 chr5 30508802 30509245 -172576287 - L1M4 LINE L1 -1987 4159 3712 * 4178 209 41 17 chr5 30509240 30511062 -172574470 + L1MA9 LINE L1 4277 6150 -162 237 287 20 164 chr5 30512052 30512400 -172573132 + MLT2F LTR ERVL 157 454 -209 375 176 0 0 chr5 30512424 30512492 -172573040 - AluJ/FLAM SINE Alu -230 72 5 327 314 40 17 chr5 30512502 30512677 -172572855 + MLT2F LTR ERVL 463 641 -22 1975 177 26 31 chr5 30513360 30513817 -172571715 - L1MA8 LINE L1 -3 6288 5834 1248 229 50 37 chr5 30514641 30515100 -172570432 - LTR37B LTR ERV1 0 468 4 23 68 0 0 chr5 30515431 30515475 -172570057 + AT_rich Low_complexity Low_complexity 1 44 0 7349 123 82 109 chr5 30516039 30517785 -172567747 - pTR5 LTR ERV1 0 2438 741 2275 84 6 6 chr5 30517807 30518118 -172567414 + AluY SINE Alu 1 311 0 1189 246 44 33 chr5 30518705 30519066 -172566466 - MLT1A1 LTR MaLR 0 365 1 2103 141 0 0 chr5 30519320 30519632 -172565900 - AluSp SINE Alu -1 312 1 27 81 0 0 chr5 30519769 30519831 -172565701 + AT_rich Low_complexity Low_complexity 1 62 0 341 340 139 4 chr5 30520316 30520554 -172564978 + Charlie2 DNA MER1_type 46 315 -2467 4970 143 4 7 chr5 30520578 30521399 -172564133 + L1PA15 LINE L1 5346 6163 -2 333 267 139 25 chr5 30521525 30521727 -172563805 - L1ME3A LINE L1 -112 6058 5834 310 318 117 0 chr5 30521770 30521924 -172563608 - L1ME3A LINE L1 -404 5766 5595 658 161 36 93 chr5 30522048 30522138 -172563394 + LTR38 LTR ERV1 1 76 -480 1898 150 0 3 chr5 30522138 30522431 -172563101 - AluSx SINE Alu -20 292 1 658 161 36 93 chr5 30522431 30522533 -172562999 + LTR38 LTR ERV1 76 182 -374 5194 177 23 28 chr5 30522533 30523128 -172562404 + L1PA16 LINE L1 4738 5335 -831 351 0 0 0 chr5 30523128 30523167 -172562365 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5194 177 23 28 chr5 30523167 30524008 -172561524 + L1PA16 LINE L1 5335 6157 -9 40 21 0 0 chr5 30524034 30524081 -172561451 + AT_rich Low_complexity Low_complexity 1 47 0 1897 168 64 13 chr5 30524099 30524475 -172561057 + LTR38 LTR ERV1 158 552 -4 23 33 0 0 chr5 30524507 30524537 -172560995 + AT_rich Low_complexity Low_complexity 1 30 0 259 138 15 15 chr5 30524539 30524604 -172560928 + (TATTG)n Simple_repeat Simple_repeat 1 65 0 304 158 0 0 chr5 30524789 30524846 -172560686 - L1MA4 LINE L1 0 6300 6244 * 469 156 46 37 chr5 30524820 30524929 -172560603 - L1M3f LINE L1 -5203 125 16 1664 209 0 0 chr5 30524977 30525288 -172560244 - AluJo SINE Alu -1 311 1 510 315 50 29 chr5 30525411 30525931 -172559601 - L1M4 LINE L1 -2272 3874 3344 1167 258 58 3 chr5 30526819 30527129 -172558403 - MER68 LTR ERV1 -9 553 227 393 172 35 23 chr5 30527128 30527215 -172558317 - LTR52 LTR ERVL -5 416 329 * 253 182 0 0 chr5 30527210 30527254 -172558278 - MER68 LTR ERV1 -467 95 52 * 517 261 30 0 chr5 30527253 30527387 -172558145 - MER77 LTR ERV1 -43 562 425 1179 162 0 5 chr5 30528575 30528766 -172556766 - AluSg/x SINE Alu -25 287 98 26 0 0 0 chr5 30529459 30529485 -172556047 + AT_rich Low_complexity Low_complexity 1 26 0 454 254 38 56 chr5 30529656 30529869 -172555663 + MER3 DNA MER1_type 1 209 0 339 281 175 31 chr5 30529920 30530080 -172555452 - MER5A DNA MER1_type 0 189 7 2206 114 0 0 chr5 30530316 30530615 -172554917 - AluSg SINE Alu -11 299 1 493 331 7 0 chr5 30530825 30530970 -172554562 + MIR SINE MIR 11 156 -106 21 0 0 0 chr5 30531039 30531060 -172554472 + AT_rich Low_complexity Low_complexity 1 21 0 355 269 10 19 chr5 30531413 30531517 -172554015 - MIR SINE MIR -56 206 104 727 303 35 45 chr5 30531526 30531988 -172553544 - L1M4 LINE L1 -1203 4943 4487 480 128 0 0 chr5 30532307 30532385 -172553147 - L1PA13 LINE L1 -4 6159 6082 401 91 0 0 chr5 30532389 30532444 -172553088 + L1PA13 LINE L1 6022 6076 -87 1555 250 15 11 chr5 30532908 30533582 -172551950 + MER21B LTR ERV1 19 750 -113 1329 269 78 47 chr5 30536046 30536596 -172548936 + MLT1E LTR MaLR 1 593 0 298 263 125 38 chr5 30536631 30536791 -172548741 + HERVL LTR ERVL 3165 3338 -2316 2823 189 41 8 chr5 30537317 30537812 -172547720 + MLT2B3 LTR ERVL 1 478 -76 636 51 20 10 chr5 30537812 30537910 -172547622 + (TCTA)n Simple_repeat Simple_repeat 2 100 0 2823 189 41 8 chr5 30537910 30537921 -172547611 + MLT2B3 LTR ERVL 478 487 -67 1998 53 0 4 chr5 30537921 30538183 -172547349 - L1PA4 LINE L1 0 6155 5895 2823 189 41 8 chr5 30538183 30538210 -172547322 + MLT2B3 LTR ERVL 487 553 -1 266 336 9 28 chr5 30538825 30538932 -172546600 - MIR SINE MIR -156 106 2 381 248 21 57 chr5 30539459 30539600 -172545932 + MER77 LTR ERV1 60 195 -410 1017 252 62 100 chr5 30539631 30540162 -172545370 + MER77 LTR ERV1 140 601 -4 22 0 0 0 chr5 30542425 30542447 -172543085 + AT_rich Low_complexity Low_complexity 1 22 0 262 276 87 31 chr5 30542876 30543003 -172542529 - MLT1J2 LTR MaLR -33 417 284 27 0 0 0 chr5 30543844 30543871 -172541661 + AT_rich Low_complexity Low_complexity 1 27 0 205 152 0 0 chr5 30544689 30544722 -172540810 + (TG)n Simple_repeat Simple_repeat 2 34 0 2246 86 0 3 chr5 30545655 30545945 -172539587 + AluSc SINE Alu 8 296 -13 967 249 108 12 chr5 30546225 30546558 -172538974 - MLT1A1 LTR MaLR 0 365 1 931 287 175 5 chr5 30547285 30547703 -172537829 + L2 LINE L2 950 1438 -1876 524 295 86 53 chr5 30548081 30548711 -172536821 - L1MEc LINE L1 -4687 1709 1039 1887 138 0 28 chr5 30548711 30549031 -172536501 - AluY SINE Alu 0 311 1 524 295 86 53 chr5 30549031 30549292 -172536240 - L1MEc LINE L1 -5357 1039 788 206 279 13 13 chr5 30550586 30550665 -172534867 + CT-rich Low_complexity Low_complexity 2 80 0 23 0 0 0 chr5 30552810 30552833 -172532699 + AT_rich Low_complexity Low_complexity 1 23 0 2009 104 3 13 chr5 30553560 30553859 -172531673 + AluY SINE Alu 1 296 -15 2368 57 0 3 chr5 30554825 30555123 -172530409 + AluY SINE Alu 1 297 -14 1326 201 40 63 chr5 30556752 30556875 -172528657 + MLT1B LTR MaLR 1 125 -265 1819 146 0 0 chr5 30556875 30557156 -172528376 + AluSx SINE Alu 30 310 -2 1326 201 40 63 chr5 30557156 30557431 -172528101 + MLT1B LTR MaLR 125 390 0 2035 117 7 0 chr5 30557573 30557872 -172527660 - AluSx SINE Alu -11 301 1 21 36 0 0 chr5 30558126 30558154 -172527378 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 30558204 30558235 -172527297 + AT_rich Low_complexity Low_complexity 1 31 0 707 322 33 0 chr5 30558526 30558737 -172526795 + MIR SINE MIR 41 258 -4 246 160 0 0 chr5 30559100 30559150 -172526382 + CT-rich Low_complexity Low_complexity 1 50 0 220 221 15 29 chr5 30560092 30560160 -172525372 + A-rich Low_complexity Low_complexity 6 72 0 2396 148 22 36 chr5 30560168 30560613 -172524919 - MER65A LTR ERV1 -5 440 2 21 36 0 0 chr5 30560643 30560671 -172524861 + AT_rich Low_complexity Low_complexity 1 28 0 298 372 71 0 chr5 30560937 30561120 -172524412 - MIR SINE MIR -16 246 51 2457 66 0 0 chr5 30561672 30561975 -172523557 + AluY SINE Alu 1 303 -8 363 216 50 144 chr5 30562036 30562175 -172523357 - L2 LINE L2 -8 3305 3180 4182 204 42 15 chr5 30562213 30562518 -172523014 - MER54A LTR ERVL -2 899 604 2099 133 10 51 chr5 30562518 30562873 -172522659 - THE1C LTR MaLR 0 375 36 2015 144 3 0 chr5 30562873 30563178 -172522354 + AluSx SINE Alu 1 306 -6 2099 133 10 51 chr5 30563178 30563213 -172522319 - THE1C LTR MaLR -339 36 1 4182 204 42 15 chr5 30563213 30563761 -172521771 - MER54A LTR ERVL -297 604 23 2905 298 74 40 chr5 30563817 30565198 -172520334 - L2 LINE L2 -215 3098 1651 1649 205 18 12 chr5 30565201 30565543 -172519989 + MLT2D LTR ERVL 1 344 -70 1227 282 164 10 chr5 30565589 30566082 -172519450 - L2 LINE L2 -1815 1499 931 219 69 0 0 chr5 30567295 30567324 -172518208 + (TA)n Simple_repeat Simple_repeat 1 29 0 330 26 0 0 chr5 30567326 30567365 -172518167 + (CA)n Simple_repeat Simple_repeat 2 40 0 1518 179 17 30 chr5 30569260 30569557 -172515975 + AluJo SINE Alu 3 295 -17 429 352 86 25 chr5 30571756 30572183 -172513349 - L1ME4a LINE L1 -296 5825 5372 205 314 11 122 chr5 30573296 30573465 -172512067 - L2 LINE L2 -181 3091 2943 2521 120 3 8 chr5 30573465 30573831 -172511701 - THE1B LTR MaLR 0 364 1 205 314 11 122 chr5 30573831 30573849 -172511683 - L2 LINE L2 -329 2943 2925 329 244 0 12 chr5 30573946 30574032 -172511500 - L1MDa LINE L1 -3381 3159 3075 1588 244 20 0 chr5 30574128 30574484 -172511048 - MLT1A1 LTR MaLR -2 363 1 198 103 0 0 chr5 30574769 30574798 -172510734 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 320 260 13 110 chr5 30574838 30574992 -172510540 - L1MDa LINE L1 -5104 1436 1298 218 122 0 61 chr5 30576107 30576156 -172509376 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 324 0 0 0 chr5 30576166 30576202 -172509330 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 35766 34 113 3 chr5 30576202 30581712 -172503820 - L1PA2 LINE L1 -13 6142 7 965 171 38 86 chr5 30581717 30582009 -172503523 - MER33 DNA MER1_type -41 283 6 22 0 0 0 chr5 30582318 30582340 -172503192 + AT_rich Low_complexity Low_complexity 1 22 0 2424 150 7 41 chr5 30583408 30583869 -172501663 - MER65A LTR ERV1 0 445 1 231 297 22 11 chr5 30584045 30584136 -172501396 + CT-rich Low_complexity Low_complexity 6 97 0 2038 108 4 0 chr5 30585498 30585776 -172499756 + AluSp SINE Alu 35 313 0 214 284 67 20 chr5 30585801 30585900 -172499632 + MIR SINE MIR 34 144 -64 28 29 0 0 chr5 30586874 30586909 -172498623 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 30588481 30588506 -172497026 + AT_rich Low_complexity Low_complexity 1 25 0 207 205 0 0 chr5 30590410 30590449 -172495083 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 2073 219 29 34 chr5 30641466 30642047 -172443485 + L1MB7 LINE L1 5606 6183 -1 308 379 44 20 chr5 30642331 30642579 -172442953 - MIR SINE MIR -8 254 1 24 32 0 0 chr5 30642654 30642685 -172442847 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr5 30643514 30643542 -172441990 + AT_rich Low_complexity Low_complexity 1 28 0 290 259 17 92 chr5 30643575 30643749 -172441783 - L1ME LINE L1 -449 5672 5512 227 317 24 12 chr5 30643961 30644043 -172441489 + MIR SINE MIR 2 84 -178 272 48 24 0 chr5 30644804 30644846 -172440686 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1339 134 10 14 chr5 30644872 30645081 -172440451 - AluSx SINE Alu -73 239 32 346 86 69 0 chr5 30645097 30645155 -172440377 - AluS SINE Alu -201 102 41 874 307 162 21 chr5 30645699 30646450 -172439082 + L2 LINE L2 2374 3234 -79 24 0 0 0 chr5 30646460 30646484 -172439048 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 30646814 30646836 -172438696 + AT_rich Low_complexity Low_complexity 1 22 0 271 353 0 0 chr5 30646861 30646963 -172438569 - MLT1I LTR MaLR -7 402 301 453 103 0 0 chr5 30647067 30647135 -172438397 + (ATTAG)n Simple_repeat Simple_repeat 3 70 0 23 33 0 0 chr5 30647158 30647188 -172438344 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 30647943 30647966 -172437566 + AT_rich Low_complexity Low_complexity 1 23 0 6031 140 15 0 chr5 30647966 30649573 -172435959 - L1PA11 LINE L1 -23 6151 4522 8320 181 8 3 chr5 30649577 30651186 -172434346 + L1PA11 LINE L1 2892 4508 -1638 212 0 36 0 chr5 30651187 30651215 -172434317 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 234 105 0 0 chr5 30652408 30652446 -172433086 + (CAA)n Simple_repeat Simple_repeat 2 39 0 347 320 75 62 chr5 30652831 30653203 -172432329 + L2 LINE L2 2055 2431 -883 364 266 92 43 chr5 30653895 30654102 -172431430 - HAL1b LINE L1 -1008 340 124 28 48 0 0 chr5 30654107 30654149 -172431383 + AT_rich Low_complexity Low_complexity 1 42 0 192 307 27 27 chr5 30654332 30654407 -172431125 - L2 LINE L2 -1263 2051 1977 778 167 34 6 chr5 30654673 30654904 -172430628 + Tigger2 DNA MER2_type 2442 2717 -1 203 252 155 10 chr5 30655204 30655307 -172430225 + L3 LINE CR1 588 705 -872 2320 235 16 29 chr5 30655434 30656051 -172429481 + L1MB7 LINE L1 5479 6087 -97 303 185 0 15 chr5 30656119 30656184 -172429348 + L1MB8 LINE L1 6106 6169 -9 482 199 46 53 chr5 30656291 30656422 -172429110 + L1ME LINE L1 462 591 -5454 44 0 0 0 chr5 30656467 30656511 -172429021 + AT_rich Low_complexity Low_complexity 1 44 0 2923 281 40 18 chr5 30657260 30658673 -172426859 + L1MCc LINE L1 1 1798 -4851 797 227 138 44 chr5 30658685 30659405 -172426127 + L1MCc LINE L1 1844 2717 -4224 2653 200 52 2 chr5 30659405 30659924 -172425608 + MER44D DNA MER2_type 1 600 -5 389 231 111 13 chr5 30659943 30660251 -172425281 + L1MCc LINE L1 2752 3131 -3961 1245 214 49 30 chr5 30660258 30660562 -172424970 + MLT2D LTR ERVL 1 310 -104 585 204 0 0 chr5 30660589 30660736 -172424796 + (TA)n Simple_repeat Simple_repeat 2 148 0 1174 291 30 11 chr5 30660905 30661380 -172424152 + L1MCc LINE L1 3130 3613 -3328 24 91 0 0 chr5 30661781 30661847 -172423685 + AT_rich Low_complexity Low_complexity 1 66 0 35 63 0 0 chr5 30661917 30661980 -172423552 + AT_rich Low_complexity Low_complexity 1 63 0 2359 62 3 0 chr5 30663085 30663389 -172422143 - AluY SINE Alu -6 305 1 287 250 54 45 chr5 30663637 30663749 -172421783 + MIR SINE MIR 24 136 -126 311 256 110 54 chr5 30664090 30664426 -172421106 + L1ME3 LINE L1 5625 5979 -183 369 261 76 78 chr5 30664582 30664913 -172420619 + L1ME LINE L1 1302 1605 -4959 22 0 0 0 chr5 30664976 30664998 -172420534 + AT_rich Low_complexity Low_complexity 1 22 0 369 247 130 55 chr5 30665265 30665877 -172419655 + L1ME LINE L1 2381 2995 -3569 25 0 0 0 chr5 30665913 30665938 -172419594 + AT_rich Low_complexity Low_complexity 1 25 0 1979 148 0 0 chr5 30666503 30666807 -172418725 + AluSx SINE Alu 1 304 -8 24 67 0 0 chr5 30667424 30667469 -172418063 + AT_rich Low_complexity Low_complexity 1 45 0 234 309 46 18 chr5 30667487 30667704 -172417828 + L1ME LINE L1 4136 4358 -2206 12203 108 20 26 chr5 30667704 30669987 -172415545 + MER41B-int LTR ERV1 2994 5945 -1 3144 110 90 0 chr5 30669988 30670488 -172415044 + MER41B LTR ERV1 3 547 -88 376 238 29 29 chr5 30670579 30670684 -172414848 + L1ME LINE L1 4438 4542 -2022 452 288 161 13 chr5 30670786 30671158 -172414374 + L1ME LINE L1 4983 5409 -1155 1304 245 69 58 chr5 30673161 30673908 -172411624 - L1ME1 LINE L1 -163 6397 5589 798 279 60 17 chr5 30674008 30674559 -172410973 - L1ME1 LINE L1 -3718 2822 2249 1953 143 3 13 chr5 30676319 30676634 -172408898 + AluSx SINE Alu 1 312 0 200 196 0 18 chr5 30677904 30677960 -172407572 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2675 170 11 5 chr5 30678142 30678578 -172406954 - Tigger2 DNA MER2_type 0 2718 2280 304 201 18 0 chr5 30678578 30678647 -172406885 - Tigger2 DNA MER2_type -2656 62 1 29 90 0 0 chr5 30678895 30678973 -172406559 + AT_rich Low_complexity Low_complexity 1 78 0 2382 68 0 0 chr5 30678989 30679284 -172406248 + AluY SINE Alu 1 295 -16 1573 183 62 32 chr5 30679869 30680207 -172405325 + MER7A DNA MER2_type 1 346 0 253 276 0 82 chr5 30680260 30680358 -172405174 + L1ME LINE L1 5895 5984 -600 1567 230 28 19 chr5 30680376 30680840 -172404692 - L1MA9 LINE L1 -37 6275 5817 2011 95 0 37 chr5 30680840 30681136 -172404396 - AluSg SINE Alu -12 298 14 1567 230 28 19 chr5 30681136 30681722 -172403810 - L1MA9 LINE L1 -495 5817 5104 219 170 21 0 chr5 30682351 30682398 -172403134 + (CA)n Simple_repeat Simple_repeat 1 48 0 1191 170 9 22 chr5 30683630 30683853 -172401679 - MSTA LTR MaLR -2 426 207 1032 231 23 11 chr5 30683851 30684111 -172401421 - MSTB LTR MaLR -163 263 1 * 2423 119 6 6 chr5 30684329 30684691 -172400841 - THE1B LTR MaLR -2 362 1 784 341 54 20 chr5 30684937 30685476 -172400056 + L1MCc LINE L1 -490 66 -5842 848 289 97 49 chr5 30685595 30686225 -172399307 + L1MCc LINE L1 293 952 -4956 260 248 115 0 chr5 30686330 30686443 -172399089 + L1MCc LINE L1 1201 1326 -5100 39 60 0 0 chr5 30686531 30686598 -172398934 + AT_rich Low_complexity Low_complexity 1 67 0 361 291 53 24 chr5 30686654 30686946 -172398586 + L1MCc LINE L1 1421 1932 -4675 1304 211 25 18 chr5 30687235 30687515 -172398017 + AluJo SINE Alu 1 282 -30 290 272 44 80 chr5 30687664 30687914 -172397618 - L1MC/D LINE L1 -2148 5660 5420 22 35 0 0 chr5 30688253 30688282 -172397250 + AT_rich Low_complexity Low_complexity 1 29 0 1070 228 49 26 chr5 30688325 30688632 -172396900 + L1ME3 LINE L1 5625 5938 -224 432 261 14 19 chr5 30688641 30688810 -172396722 + L1MA10 LINE L1 5988 6316 -18 216 97 0 0 chr5 30690449 30690480 -172395052 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2184 81 40 0 chr5 30690721 30691017 -172394515 - AluY SINE Alu -3 308 1 310 317 10 0 chr5 30691133 30691237 -172394295 + (TATG)n Simple_repeat Simple_repeat 3 107 0 29 0 0 0 chr5 30691336 30691365 -172394167 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr5 30691382 30691408 -172394124 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 27 49 0 0 chr5 30692152 30692193 -172393339 + AT_rich Low_complexity Low_complexity 1 41 0 296 185 64 19 chr5 30692876 30693033 -172392499 + (TA)n Simple_repeat Simple_repeat 2 165 0 1807 189 14 3 chr5 30693080 30693424 -172392108 + MER7A DNA MER2_type 1 346 0 271 338 28 21 chr5 30694085 30694227 -172391305 + MER5A DNA MER1_type 9 151 -38 2153 112 0 0 chr5 30694379 30694673 -172390859 - AluSg1 SINE Alu -15 294 1 1219 244 60 55 chr5 30694708 30695110 -172390422 - MER92A LTR ERV1 -8 404 1 30 27 0 0 chr5 30695157 30695194 -172390338 + AT_rich Low_complexity Low_complexity 1 37 0 897 239 34 10 chr5 30695373 30695578 -172389954 - MLT1H LTR MaLR -274 275 66 2868 155 39 109 chr5 30697671 30698343 -172387189 + MER51A LTR ERV1 1 625 -9 309 350 120 39 chr5 30698442 30698825 -172386707 + L2 LINE L2 2900 3313 0 2066 109 169 11 chr5 30698963 30699331 -172386201 + MSTA LTR MaLR 3 428 0 1955 219 23 10 chr5 30699592 30700071 -172385461 + MER31A LTR ERV1 1 485 0 22 0 0 0 chr5 30700085 30700107 -172385425 + AT_rich Low_complexity Low_complexity 1 22 0 226 282 13 13 chr5 30700995 30701073 -172384459 + MIR SINE MIR 66 143 -119 299 295 74 9 chr5 30701163 30701380 -172384152 + L1M4 LINE L1 4116 4346 -1800 23 0 0 0 chr5 30701531 30701554 -172383978 + AT_rich Low_complexity Low_complexity 1 23 0 375 183 78 26 chr5 30701570 30701685 -172383847 + L1M4 LINE L1 4598 4718 -1428 613 337 42 29 chr5 30703107 30703484 -172382048 + HERV16 LTR ERVL 2116 2497 -2499 22 70 0 0 chr5 30704536 30704579 -172380953 + AT_rich Low_complexity Low_complexity 1 43 0 716 206 67 75 chr5 30705090 30705458 -172380074 + LTR21B LTR ERV1 28 438 0 9168 210 31 34 chr5 30705458 30709581 -172375951 + HERVFH21 LTR ERV1 1 3970 -2559 2952 294 27 41 chr5 30709717 30711133 -172374399 + HERVFH21 LTR ERV1 5354 6529 0 621 214 78 48 chr5 30711152 30711511 -172374021 + LTR21B LTR ERV1 28 438 0 2852 13 0 0 chr5 30711620 30711938 -172373594 + AluYb8 SINE Alu 1 318 0 2982 278 104 48 chr5 30712350 30713172 -172372360 + L1MB7 LINE L1 15 790 -5856 297 68 0 0 chr5 30713172 30713216 -172372316 + (CA)n Simple_repeat Simple_repeat 1 44 0 2982 278 104 48 chr5 30713216 30714351 -172371181 + L1MB7 LINE L1 790 2096 -4550 1194 245 46 14 chr5 30714379 30714768 -172370764 - L1MB5 LINE L1 -8 6166 5764 3839 263 46 46 chr5 30714954 30716847 -172368685 + L1MB7 LINE L1 2536 4426 -2218 2337 101 0 0 chr5 30716847 30717154 -172368378 - AluSx SINE Alu -5 307 1 3839 263 46 46 chr5 30717154 30717371 -172368161 + L1MB7 LINE L1 4426 4642 -2002 773 274 68 3 chr5 30717373 30717665 -172367867 + L1MB7 LINE L1 5367 5677 -967 9523 208 78 7 chr5 30717668 30720681 -172364851 + L1M1 LINE L1 24 2666 -4899 2237 141 8 19 chr5 30720681 30721057 -172364475 + THE1C LTR MaLR 1 372 -3 9523 208 78 7 chr5 30721057 30721211 -172364321 + L1M1 LINE L1 2666 2808 -4757 7387 233 68 25 chr5 30721215 30726659 -172358873 + L1MA6 LINE L1 2097 7707 -12 435 190 28 45 chr5 30726659 30726838 -172358694 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 3339 230 48 9 chr5 30726846 30727800 -172357732 + L1MB7 LINE L1 5686 6674 -8 868 245 21 0 chr5 30727976 30728164 -172357368 - MLT1A1 LTR MaLR 0 365 174 392 176 0 27 chr5 30728172 30728246 -172357286 - MLT1A1 LTR MaLR -356 72 1 27 0 0 0 chr5 30728942 30728969 -172356563 + AT_rich Low_complexity Low_complexity 1 27 0 2077 114 6 9 chr5 30729003 30729327 -172356205 - L1MA2 LINE L1 0 6304 5982 230 246 16 0 chr5 30730760 30730821 -172354711 + (TG)n Simple_repeat Simple_repeat 1 62 0 2626 241 18 7 chr5 30730941 30731621 -172353911 + L1MB1 LINE L1 4406 5092 -1054 1566 188 33 11 chr5 30731637 30732005 -172353527 + L1MB1 LINE L1 5791 6166 -2 262 156 65 13 chr5 30732295 30732372 -172353160 + Charlie6 DNA MER1_type 2806 2886 -614 2624 188 11 6 chr5 30732638 30733106 -172352426 - MER70A LTR ERVL 0 472 3 2171 121 0 3 chr5 30733454 30733752 -172351780 - AluSg SINE Alu -5 305 9 736 203 14 0 chr5 30734853 30734996 -172350536 - AluSg/x SINE Alu -13 299 155 273 196 0 0 chr5 30735333 30735389 -172350143 + (TA)n Simple_repeat Simple_repeat 1 56 0 2822 170 20 7 chr5 30735550 30736091 -172349441 + L1MA4 LINE L1 5742 6289 -11 265 299 21 21 chr5 30737226 30737323 -172348209 + MER69 DNA AcHobo 48 144 -2382 398 200 80 0 chr5 30738119 30738219 -172347313 - MLT1H LTR MaLR -3 546 439 275 279 217 0 chr5 30738339 30738468 -172347064 - MLT1H1 LTR MaLR -341 214 58 * 398 256 60 0 chr5 30738440 30738557 -172346975 - MLT1H LTR MaLR -421 128 5 1153 250 21 62 chr5 30738626 30739014 -172346518 + MLT1A2 LTR MaLR 1 372 -2 286 0 91 0 chr5 30739223 30739267 -172346265 + T-rich Low_complexity Low_complexity 4 51 0 1827 152 0 3 chr5 30739278 30739568 -172345964 - AluSx SINE Alu -23 289 1 1702 222 41 3 chr5 30739663 30740084 -172345448 - L1MB7 LINE L1 0 6184 5745 246 275 0 25 chr5 30740076 30740100 -172345432 - L1MA10 LINE L1 -77 6257 6234 * 497 239 46 95 chr5 30740100 30740363 -172345169 - L1ME1 LINE L1 -92 6074 5825 28 95 0 0 chr5 30740363 30740447 -172345085 + AT_rich Low_complexity Low_complexity 1 84 0 335 169 16 12 chr5 30740455 30740542 -172344990 - L1ME1 LINE L1 -354 5812 5724 1281 258 33 10 chr5 30740713 30741108 -172344424 + L1ME1 LINE L1 5747 6150 -16 320 298 60 13 chr5 30741123 30741358 -172344174 + L1M4 LINE L1 4314 4559 -1587 33 56 0 0 chr5 30741409 30741463 -172344069 + AT_rich Low_complexity Low_complexity 1 54 0 995 176 87 128 chr5 30741918 30742050 -172343482 + AluJo SINE Alu 4 140 -162 1937 139 0 16 chr5 30742050 30742360 -172343172 + AluSq SINE Alu 9 313 0 995 176 87 128 chr5 30742360 30742374 -172343158 + AluJo SINE Alu 140 153 -149 195 69 0 0 chr5 30742374 30742403 -172343129 + (CCAA)n Simple_repeat Simple_repeat 4 32 0 995 176 87 128 chr5 30742403 30742567 -172342965 + AluJo SINE Alu 153 302 0 28 48 0 0 chr5 30743171 30743213 -172342319 + AT_rich Low_complexity Low_complexity 1 42 0 433 250 8 53 chr5 30743255 30743499 -172342033 - L1MC5 LINE L1 -124 7837 7605 379 341 89 20 chr5 30743697 30744090 -172341442 + L1MEd LINE L1 786 1205 -5000 1465 183 61 4 chr5 30744130 30744409 -172341123 + AluJb SINE Alu 7 301 -11 1955 70 60 7 chr5 30744522 30744806 -172340726 + AluY SINE Alu 1 299 -12 313 338 27 0 chr5 30744988 30745136 -172340396 + L1MEd LINE L1 1544 1695 -4701 434 333 36 28 chr5 30745454 30745784 -172339748 + L1MEd LINE L1 2167 2458 -3757 2022 117 3 0 chr5 30746134 30746432 -172339100 + AluSc SINE Alu 1 299 -10 180 0 0 0 chr5 30746485 30746505 -172339027 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 636 272 103 57 chr5 30746763 30747697 -172337835 + L1M4 LINE L1 3871 4847 -1299 808 226 36 5 chr5 30747968 30748163 -172337369 - MER20 DNA MER1_type -18 201 1 266 106 0 43 chr5 30748545 30748592 -172336940 + L1ME3A LINE L1 5907 5951 -211 240 281 50 66 chr5 30748652 30748773 -172336759 + L1ME3A LINE L1 5962 6080 -90 227 241 30 83 chr5 30748832 30748965 -172336567 - L1ME4a LINE L1 -57 6064 5939 339 167 21 10 chr5 30749239 30749335 -172336197 + (TA)n Simple_repeat Simple_repeat 2 98 0 25 75 0 0 chr5 30749368 30749421 -172336111 + AT_rich Low_complexity Low_complexity 1 53 0 22 70 0 0 chr5 30749778 30749821 -172335711 + AT_rich Low_complexity Low_complexity 1 43 0 443 254 127 8 chr5 30750445 30750571 -172334961 + Tigger7 DNA MER2_type 20 160 -545 523 147 83 18 chr5 30750590 30750699 -172334833 + Tigger7 DNA MER2_type 2209 2324 -163 654 162 136 13 chr5 30750964 30751118 -172334414 + Tigger7 DNA MER2_type 2313 2485 -2 21 36 0 0 chr5 30752317 30752345 -172333187 + AT_rich Low_complexity Low_complexity 1 28 0 1187 227 30 57 chr5 30752438 30752804 -172332728 + MLT1A1 LTR MaLR 10 365 0 2198 238 72 27 chr5 30752804 30753561 -172331971 + MLT1A1-int LTR MaLR 1 883 -488 2059 188 22 20 chr5 30753911 30754320 -172331212 + MLT1A1-int LTR MaLR 1326 1735 0 1249 220 38 59 chr5 30754320 30754377 -172331155 + MLT1A1 LTR MaLR 1 58 -307 2523 14 0 0 chr5 30754377 30754657 -172330875 - AluYb8 SINE Alu 0 318 39 1249 220 38 59 chr5 30754657 30754972 -172330560 + MLT1A1 LTR MaLR 58 365 0 596 206 73 0 chr5 30755211 30755376 -172330156 - L1MA7 LINE L1 -3 6288 6112 * 785 190 25 50 chr5 30755366 30755566 -172329966 + L1MA7 LINE L1 5931 6125 -166 776 240 17 0 chr5 30757195 30757370 -172328162 + MSTD LTR MaLR 219 396 0 1309 152 33 84 chr5 30757385 30757720 -172327812 - L1PB4 LINE L1 -301 5855 5538 * 2494 192 11 51 chr5 30757713 30758567 -172326965 + L1PB4 LINE L1 4731 5543 -613 2418 114 11 19 chr5 30758982 30759360 -172326172 + THE1C LTR MaLR 1 375 0 4384 203 72 13 chr5 30759370 30759495 -172326037 - L1PB4 LINE L1 -725 5429 5313 234 0 0 0 chr5 30759495 30759521 -172326011 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4384 203 72 13 chr5 30759521 30760390 -172325142 - L1PB4 LINE L1 -841 5313 4369 198 0 0 0 chr5 30760390 30760412 -172325120 + (TG)n Simple_repeat Simple_repeat 1 22 0 4384 203 72 13 chr5 30760412 30760609 -172324923 - L1PB4 LINE L1 -1785 4369 4185 21 0 0 0 chr5 30760636 30760657 -172324875 + AT_rich Low_complexity Low_complexity 1 21 0 246 302 66 50 chr5 30761154 30761336 -172324196 - L2 LINE L2 -2 3311 3127 541 320 189 36 chr5 30761481 30762038 -172323494 - L2 LINE L2 -437 2877 2236 236 196 0 36 chr5 30762064 30762120 -172323412 + L1P4 LINE L1 5519 5572 -602 230 149 0 0 chr5 30762685 30762732 -172322800 - LTR66 LTR ERVL -170 440 394 390 380 10 10 chr5 30762746 30762954 -172322578 + L1ME3 LINE L1 5683 5890 -272 2150 94 3 3 chr5 30762968 30763255 -172322277 - AluSq SINE Alu -22 291 5 1733 122 107 4 chr5 30763718 30763989 -172321543 - AluSq SINE Alu -14 299 1 2150 132 0 48 chr5 30763989 30764367 -172321165 - L1PA13 LINE L1 -4 6159 5800 1857 129 26 13 chr5 30764445 30764747 -172320785 + AluSx SINE Alu 1 306 -6 314 300 50 25 chr5 30765216 30765336 -172320196 - L2 LINE L2 -219 3053 2931 1513 160 219 17 chr5 30765429 30765785 -172319747 + MSTA LTR MaLR 1 428 0 42 36 0 0 chr5 30766241 30766297 -172319235 + AT_rich Low_complexity Low_complexity 1 56 0 339 320 141 30 chr5 30766299 30766533 -172318999 - MIR SINE MIR 0 262 3 902 329 69 27 chr5 30766576 30767325 -172318207 - L2 LINE L2 -18 3295 2433 307 257 6 18 chr5 30771486 30771598 -172313934 + L1ME LINE L1 5725 5832 -338 245 50 0 25 chr5 30771649 30771689 -172313843 + (TA)n Simple_repeat Simple_repeat 1 39 0 204 154 46 15 chr5 30771859 30771924 -172313608 + (TTATA)n Simple_repeat Simple_repeat 2 68 0 257 254 45 0 chr5 30772230 30772297 -172313235 - L1ME3A LINE L1 -17 6153 6084 300 186 0 0 chr5 30772389 30772448 -172313084 + (TG)n Simple_repeat Simple_repeat 1 59 0 247 250 0 0 chr5 30772489 30772545 -172312987 + (TG)n Simple_repeat Simple_repeat 1 56 0 687 271 142 57 chr5 30772549 30773076 -172312456 - L1ME3A LINE L1 -282 5888 5317 342 280 82 24 chr5 30773540 30773747 -172311785 - L1ME3A LINE L1 -1481 4665 4447 454 326 122 43 chr5 30773795 30773951 -172311581 - L1ME3A LINE L1 -1777 4369 4227 2866 6 0 6 chr5 30773951 30774271 -172311261 - AluYb8 SINE Alu 0 318 1 454 326 122 43 chr5 30774271 30774743 -172310789 - L1ME3A LINE L1 -1919 4227 3691 25 0 0 0 chr5 30775786 30775811 -172309721 + AT_rich Low_complexity Low_complexity 1 25 0 351 280 40 0 chr5 30776512 30776612 -172308920 - MIR SINE MIR -29 233 130 2341 103 0 0 chr5 30777031 30777366 -172308166 - AluSx SINE Alu 0 335 1 713 267 82 55 chr5 30777474 30777872 -172307660 - L1ME LINE L1 -397 5765 5336 314 284 78 51 chr5 30778013 30778258 -172307274 - L1ME LINE L1 -941 5205 4945 2343 97 7 0 chr5 30778258 30778568 -172306964 - AluSx SINE Alu 0 312 1 314 284 78 51 chr5 30778568 30778695 -172306837 - L1ME LINE L1 -1201 4945 4823 23 54 0 0 chr5 30779361 30779398 -172306134 + AT_rich Low_complexity Low_complexity 1 37 0 2314 48 0 83 chr5 30779398 30779734 -172305798 - AluY SINE Alu -3 308 1 56 42 0 11 chr5 30779836 30779860 -172305672 + AT_rich Low_complexity Low_complexity 1 24 -70 1934 159 0 10 chr5 30779860 30780169 -172305363 + AluSx SINE Alu 1 306 -6 56 42 0 11 chr5 30780169 30780239 -172305293 + AT_rich Low_complexity Low_complexity 24 94 0 1758 138 34 20 chr5 30781126 30781424 -172304108 + AluSq SINE Alu 1 302 -11 1307 209 46 114 chr5 30782419 30782637 -172302895 + MLT1D LTR MaLR 12 243 -262 2518 44 0 25 chr5 30782637 30782956 -172302576 + AluY SINE Alu 1 311 0 1307 209 46 114 chr5 30782956 30783263 -172302269 + MLT1D LTR MaLR 243 501 -4 1526 184 86 84 chr5 30785768 30785986 -172299546 - MLT1C LTR MaLR -3 464 248 207 0 0 0 chr5 30785986 30786009 -172299523 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1942 136 0 4 chr5 30786012 30786292 -172299240 - AluSg SINE Alu -31 279 1 1526 184 86 84 chr5 30786292 30786391 -172299141 - MLT1C LTR MaLR -220 247 150 2031 181 36 59 chr5 30786391 30786917 -172298615 - MER67D LTR ERV1 0 514 1 1526 184 86 84 chr5 30786917 30787057 -172298475 - MLT1C LTR MaLR -317 150 1 1442 190 7 49 chr5 30787538 30787843 -172297689 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr5 30788375 30788396 -172297136 + AT_rich Low_complexity Low_complexity 1 21 0 3243 61 42 9 chr5 30789164 30789210 -172296322 - MLT2A1 LTR ERVL 0 444 401 252 0 0 0 chr5 30789210 30789238 -172296294 + (TA)n Simple_repeat Simple_repeat 2 29 0 3243 61 42 9 chr5 30789238 30789619 -172295913 - MLT2A1 LTR ERVL -43 401 3 254 361 162 0 chr5 30789621 30789812 -172295720 - MIR SINE MIR 0 262 41 2126 90 50 10 chr5 30790420 30790720 -172294812 + AluSq SINE Alu 1 312 -1 2711 156 67 27 chr5 30790908 30791472 -172294060 - L1MB1 LINE L1 -14 6175 5589 22 56 0 0 chr5 30792154 30792190 -172293342 + AT_rich Low_complexity Low_complexity 1 36 0 1428 185 26 45 chr5 30792861 30793169 -172292363 + AluJo SINE Alu 1 302 0 206 192 19 0 chr5 30793216 30793268 -172292264 + (TG)n Simple_repeat Simple_repeat 2 54 0 28 48 0 0 chr5 30793498 30793540 -172291992 + AT_rich Low_complexity Low_complexity 1 42 0 1973 175 39 24 chr5 30793685 30794067 -172291465 + MER61D LTR ERV1 114 501 0 16225 197 23 31 chr5 30794950 30799085 -172286447 + L1PA15-16 LINE L1 5 4121 -2728 281 116 14 87 chr5 30799078 30799147 -172286385 + L1PA13 LINE L1 6102 6165 -1 * 642 314 87 28 chr5 30799870 30800384 -172285148 + L2 LINE L2 2528 3082 -231 24717 25 1 0 chr5 30801146 30804095 -172281437 - L1PA2 LINE L1 -1270 4876 1926 7790 16 0 6 chr5 30804095 30805404 -172280128 + L1PA2 LINE L1 4851 6154 -1 21 36 0 0 chr5 30805928 30805956 -172279576 + AT_rich Low_complexity Low_complexity 1 28 0 249 57 0 0 chr5 30806055 30806090 -172279442 + (CA)n Simple_repeat Simple_repeat 2 36 0 1961 162 36 25 chr5 30806117 30806475 -172279057 - THE1B LTR MaLR -2 362 1 6067 106 11 7 chr5 30806954 30808945 -172276587 - L1PA12 LINE L1 0 6819 4818 207 0 0 0 chr5 30808945 30808968 -172276564 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2171 82 7 0 chr5 30808968 30809249 -172276283 - AluY SINE Alu -28 283 1 2268 84 3 0 chr5 30809482 30809769 -172275763 - AluY SINE Alu -23 288 1 6702 233 13 17 chr5 30809769 30811505 -172274027 - L1PA12 LINE L1 -1971 4826 3098 1011 205 17 17 chr5 30811509 30811748 -172273784 - L1P LINE L1 -1668 4478 4240 312 91 0 0 chr5 30811758 30811802 -172273730 + (TA)n Simple_repeat Simple_repeat 2 45 0 10213 222 74 25 chr5 30811802 30814763 -172270769 - L1PA12 LINE L1 -3704 3093 1 2424 73 7 0 chr5 30815342 30815643 -172269889 + AluY SINE Alu 1 303 -8 970 294 52 25 chr5 30816102 30816470 -172269062 + LTR16C LTR ERVL 112 489 -2 2189 109 3 13 chr5 30817092 30817405 -172268127 + AluY SINE Alu 1 310 -1 34 24 0 0 chr5 30818390 30818431 -172267101 + AT_rich Low_complexity Low_complexity 1 41 0 1965 342 67 52 chr5 30818828 30820503 -172265029 + ERVL LTR ERVL 1782 3432 -2332 1522 191 0 66 chr5 30820503 30820822 -172264710 + AluJb SINE Alu 6 303 -9 1965 342 67 52 chr5 30820822 30820838 -172264694 + ERVL LTR ERVL 3432 3446 -2318 2187 188 19 37 chr5 30820838 30821302 -172264230 - MSTB2 LTR MaLR -1 456 1 1965 342 67 52 chr5 30821302 30821742 -172263790 + ERVL LTR ERVL 3446 3944 -1820 2126 149 25 6 chr5 30822808 30823164 -172262368 + THE1B LTR MaLR 1 363 -1 21 71 0 0 chr5 30823683 30823725 -172261807 + AT_rich Low_complexity Low_complexity 1 42 0 308 156 0 26 chr5 30823981 30824058 -172261474 + (TAGA)n Simple_repeat Simple_repeat 3 77 0 213 269 0 0 chr5 30824552 30824604 -172260928 + (TG)n Simple_repeat Simple_repeat 1 52 0 2148 172 36 19 chr5 30824678 30825097 -172260435 + MSTB LTR MaLR 1 426 0 1292 237 51 88 chr5 30825102 30825703 -172259829 + MLT1E2 LTR MaLR 72 624 -2 256 346 92 29 chr5 30825779 30826019 -172259513 + MIR SINE MIR 6 260 -2 275 328 60 0 chr5 30826726 30826860 -172258672 - MER5B DNA MER1_type -30 148 7 27 0 0 0 chr5 30827820 30827847 -172257685 + AT_rich Low_complexity Low_complexity 1 27 0 1948 163 0 0 chr5 30828208 30828509 -172257023 - AluJb SINE Alu -11 301 1 295 241 293 0 chr5 30828661 30828777 -172256755 - MIR SINE MIR -56 206 57 869 277 76 38 chr5 30829008 30829351 -172256181 + MER57A LTR ERV1 42 397 -6 1113 248 78 71 chr5 30829467 30830079 -172255453 + L1M4 LINE L1 2440 3063 -3083 2008 135 6 13 chr5 30830079 30830390 -172255142 + AluSc SINE Alu 1 309 0 1113 248 78 71 chr5 30830390 30830848 -172254684 + L1M4 LINE L1 3063 3517 -2629 278 186 23 58 chr5 30830863 30830949 -172254583 + L1P LINE L1 3595 3677 -2469 771 250 103 25 chr5 30831665 30832061 -172253471 + L1M4 LINE L1 3673 4099 -2047 323 244 64 35 chr5 30832095 30832267 -172253265 + L1M4 LINE L1 4244 4420 -1726 271 258 50 25 chr5 30832339 30832498 -172253034 + L1M4 LINE L1 4590 4752 -1394 1117 211 114 44 chr5 30834184 30834525 -172251007 - MLT1A1 LTR MaLR 0 365 1 1009 247 61 63 chr5 30834640 30835085 -172250447 + MER39 LTR ERV1 246 689 -18 198 316 41 31 chr5 30835942 30836040 -172249492 - L2 LINE L2 -1017 2297 2199 568 196 245 20 chr5 30836535 30836739 -172248793 - MIR SINE MIR -10 252 3 244 277 12 0 chr5 30836994 30837077 -172248455 + (CATATA)n Simple_repeat Simple_repeat 1 84 0 1191 288 46 53 chr5 30837228 30837870 -172247662 + HsTC2a DNA Tc2 14 652 -1248 2116 80 0 57 chr5 30837870 30838218 -172247314 - AluY SINE Alu 0 311 1 1191 288 46 53 chr5 30838218 30838308 -172247224 + HsTC2a DNA Tc2 652 741 -3 182 118 29 0 chr5 30839368 30839402 -172246130 + CT-rich Low_complexity Low_complexity 2 36 0 735 188 65 21 chr5 30841122 30841308 -172244224 + L1MCc LINE L1 41 234 -6189 529 300 52 54 chr5 30841397 30841881 -172243651 + L1MCc LINE L1 1006 1488 -4935 288 302 49 63 chr5 30841894 30841915 -172243617 + L1MCc LINE L1 1505 1525 -5416 13148 40 0 1 chr5 30841915 30844294 -172241238 + L1PA4 LINE L1 3775 6153 -2 288 302 49 63 chr5 30844294 30844903 -172240629 + L1MCc LINE L1 1525 2128 -4813 311 289 102 33 chr5 30844945 30845394 -172240138 + L1MCc LINE L1 2387 2866 -4256 317 317 74 22 chr5 30845428 30845794 -172239738 + L1MCc LINE L1 2999 3383 -3558 1929 173 39 63 chr5 30845843 30845882 -172239650 - MSTB LTR MaLR 0 426 388 1674 170 10 3 chr5 30845882 30846171 -172239361 + AluSx SINE Alu 1 291 -21 1929 173 39 63 chr5 30846171 30846542 -172238990 - MSTB LTR MaLR -38 388 26 552 246 78 50 chr5 30846548 30846961 -172238571 + L1MCc LINE L1 3507 3940 -3001 2011 114 20 27 chr5 30846961 30847259 -172238273 + AluSc SINE Alu 1 296 -13 552 246 78 50 chr5 30847259 30847369 -172238163 + L1MCc LINE L1 3940 4045 -2896 3624 197 29 3 chr5 30847402 30848119 -172237413 - L1PA16 LINE L1 -16 6150 5415 * 9329 225 43 55 chr5 30848111 30851243 -172234289 - L1 LINE L1 -752 6097 3003 36087 97 12 9 chr5 30851252 30857382 -172228150 - L1PA6 LINE L1 -1 6153 11 758 167 36 17 chr5 30857359 30857565 -172227967 - L1PA15-16 LINE L1 -3820 2326 2118 * 1607 218 6 0 chr5 30857555 30857871 -172227661 - L1PA15-16 LINE L1 -4229 2620 2303 468 268 7 0 chr5 30857873 30858011 -172227521 + L1 LINE L1 3346 3484 -2662 1127 267 14 6 chr5 30858024 30858380 -172227152 - L1PA15-16 LINE L1 -4560 2289 1931 404 368 78 45 chr5 30859196 30859712 -172225820 - L1PA15-16 LINE L1 -6175 664 132 865 168 84 35 chr5 30859851 30860053 -172225479 - L1MA7 LINE L1 -171 6120 5909 767 178 35 0 chr5 30860053 30860222 -172225310 + L1MA7 LINE L1 6113 6287 -4 1172 271 82 20 chr5 30860228 30860840 -172224692 + L1M4 LINE L1 4328 4977 -1169 338 294 85 68 chr5 30860931 30861285 -172224247 - L1M4 LINE L1 -795 5351 4992 1752 170 40 30 chr5 30862590 30862961 -172222571 - THE1C LTR MaLR 0 375 1 8891 147 11 36 chr5 30862961 30864578 -172220954 - THE1C-int LTR MaLR 0 1580 4 1382 192 54 40 chr5 30864582 30864952 -172220580 - THE1C LTR MaLR 0 375 1 576 286 102 29 chr5 30865343 30865588 -172219944 - MLT1D LTR MaLR -3 502 240 1795 228 71 9 chr5 30865592 30866013 -172219519 + LOR1b LTR ERV1 11 457 -4 510 232 46 87 chr5 30866017 30866258 -172219274 - MLT1D LTR MaLR -272 233 3 5039 185 43 8 chr5 30866518 30867621 -172217911 - L1MA5 LINE L1 -2 7319 6181 219 36 0 0 chr5 30867621 30867649 -172217883 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2026 118 0 0 chr5 30867649 30867929 -172217603 - AluY SINE Alu -28 283 4 6596 240 94 15 chr5 30867940 30870333 -172215199 - L1MA5 LINE L1 -2377 4790 1969 1474 211 3 0 chr5 30870333 30870622 -172214910 - AluJo SINE Alu -20 292 3 6596 240 94 15 chr5 30870622 30872007 -172213525 - L1MA5 LINE L1 -5198 1969 695 434 343 6 39 chr5 30872015 30872193 -172213339 - L1MA5 LINE L1 -6333 835 664 21 57 0 0 chr5 30872433 30872468 -172213064 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 30872523 30872551 -172212981 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr5 30873067 30873113 -172212419 + (CA)n Simple_repeat Simple_repeat 2 47 0 4876 182 29 13 chr5 30873494 30874796 -172210736 + L1PA16 LINE L1 4833 6157 -9 21 0 0 0 chr5 30874796 30874817 -172210715 + AT_rich Low_complexity Low_complexity 1 21 0 1377 202 52 3 chr5 30874830 30875117 -172210415 + MLT2D LTR ERVL 9 309 -105 251 355 27 0 chr5 30875142 30875252 -172210280 + MLT1I LTR MaLR 26 138 -271 328 275 64 0 chr5 30875377 30875486 -172210046 + MLT1I LTR MaLR 294 409 0 278 375 64 27 chr5 30875547 30876029 -172209503 + ERVL LTR ERVL 1506 2005 -3759 195 42 0 0 chr5 30876186 30876210 -172209322 + (TA)n Simple_repeat Simple_repeat 2 25 0 836 281 40 16 chr5 30876343 30876596 -172208936 + ERVL LTR ERVL 2272 2530 -3124 279 354 49 22 chr5 30876955 30877178 -172208354 + ERVL LTR ERVL 2857 3085 -2569 1683 6 0 0 chr5 30877927 30878110 -172207422 - AluYa5 SINE Alu -128 183 1 333 347 33 49 chr5 30878352 30878802 -172206730 - L1M4 LINE L1 -2691 3455 3013 21 0 0 0 chr5 30878986 30879007 -172206525 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 39 44 chr5 30879113 30879293 -172206239 + (TA)n Simple_repeat Simple_repeat 2 180 0 388 67 4 32 chr5 30879526 30879589 -172205943 + MLT2A1 LTR ERVL 391 444 0 34 0 0 0 chr5 30879608 30879642 -172205890 + AT_rich Low_complexity Low_complexity 1 34 0 2990 91 8 0 chr5 30879695 30880092 -172205440 - MLT2A1 LTR ERVL -40 404 5 4805 140 61 3 chr5 30880146 30880986 -172204546 + L1P3 LINE L1 4 794 -5352 5949 52 18 4 chr5 30880986 30881754 -172203778 + L1PA5 LINE L1 5368 6151 -3 4805 140 61 3 chr5 30881754 30881768 -172203764 + L1P3 LINE L1 794 3783 -2363 237 33 0 0 chr5 30882081 30882111 -172203421 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 77 0 0 chr5 30882441 30882467 -172203065 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 23 33 0 0 chr5 30883885 30883915 -172201617 + AT_rich Low_complexity Low_complexity 1 30 0 243 365 0 0 chr5 30884024 30884128 -172201404 - L1 LINE L1 -1983 4163 4060 37 90 0 0 chr5 30884886 30884986 -172200546 + AT_rich Low_complexity Low_complexity 1 100 0 492 272 84 10 chr5 30885687 30885889 -172199643 + L1MD3 LINE L1 6990 7206 -789 442 246 31 0 chr5 30885896 30886026 -172199506 + MLT1F1 LTR MaLR 1 134 -433 1143 273 37 5 chr5 30886026 30886435 -172199097 + L1MD3 LINE L1 7236 7703 -125 2260 113 8 31 chr5 30886717 30887070 -172198462 - THE1B LTR MaLR -19 345 1 218 300 14 0 chr5 30887781 30887851 -172197681 + GA-rich Low_complexity Low_complexity 1 71 0 1719 190 10 70 chr5 30888553 30888968 -172196564 + MLT1B LTR MaLR 1 390 0 750 140 0 0 chr5 30889583 30889697 -172195835 - AluSp/q SINE Alu -12 301 188 2004 141 0 3 chr5 30889775 30890081 -172195451 - AluSx SINE Alu -7 305 1 206 250 11 68 chr5 30890225 30890313 -172195219 - MIR SINE MIR -56 206 124 22 35 0 0 chr5 30890849 30890878 -172194654 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 30891323 30891344 -172194188 + AT_rich Low_complexity Low_complexity 1 21 0 211 313 123 31 chr5 30891495 30891690 -172193842 + MIR SINE MIR 48 260 -2 1952 62 0 33 chr5 30892030 30892304 -172193228 - L1PA7 LINE L1 0 6154 5890 409 358 48 60 chr5 30892379 30892784 -172192748 - L2 LINE L2 -148 3165 2768 268 337 32 0 chr5 30892792 30892887 -172192645 + MIR SINE MIR 1 98 -164 204 211 0 0 chr5 30893617 30893655 -172191877 + (CA)n Simple_repeat Simple_repeat 2 39 0 384 325 106 56 chr5 30894067 30894424 -172191108 + L1MEd LINE L1 407 781 -5338 318 349 59 21 chr5 30894579 30894817 -172190715 + HAL1 LINE L1 195 441 -2066 2243 127 3 0 chr5 30894820 30895144 -172190388 + L1PB1 LINE L1 5797 6121 -30 21 36 0 0 chr5 30895359 30895387 -172190145 + AT_rich Low_complexity Low_complexity 1 28 0 265 302 101 41 chr5 30895428 30895597 -172189935 + HAL1 LINE L1 743 921 -1586 2757 48 6 14 chr5 30895646 30896002 -172189530 + L1PA5 LINE L1 5797 6149 -5 399 295 58 7 chr5 30896044 30896183 -172189349 - L1ME LINE L1 -2025 4357 4212 * 556 316 21 24 chr5 30896176 30896505 -172189027 - L1ME LINE L1 -3801 2581 2321 21 36 0 0 chr5 30896696 30896724 -172188808 + AT_rich Low_complexity Low_complexity 1 28 0 267 292 67 48 chr5 30896758 30897382 -172188150 - L1ME LINE L1 -4559 2004 1266 198 0 0 0 chr5 30897393 30897415 -172188117 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 4200 146 6 22 chr5 30897415 30898089 -172187443 - L1PA16 LINE L1 -11 6155 5492 2252 107 0 0 chr5 30898089 30898387 -172187145 - AluY SINE Alu -12 299 2 4200 146 6 22 chr5 30898387 30898437 -172187095 - L1PA16 LINE L1 -674 5492 5443 2029 207 47 6 chr5 30898437 30898905 -172186627 + L1P LINE L1 4561 5047 -1099 879 240 64 43 chr5 30900094 30900413 -172185119 - L1MB7 LINE L1 0 6184 5868 2245 112 0 0 chr5 30900443 30900746 -172184786 - AluSx SINE Alu -9 303 1 281 335 23 40 chr5 30901914 30902087 -172183445 - MIR SINE MIR 0 262 93 1397 306 3 67 chr5 30902218 30902548 -172182984 + AluSx SINE Alu 1 309 -3 184 317 48 39 chr5 30902712 30902816 -172182716 - L2 LINE L2 -14 3299 3195 2255 107 0 0 chr5 30903899 30904208 -172181324 + AluSg SINE Alu 1 309 -1 32 57 0 0 chr5 30905234 30905287 -172180245 + AT_rich Low_complexity Low_complexity 1 53 0 913 136 19 7 chr5 30905778 30905932 -172179600 + L1PB2 LINE L1 5993 6148 -3 786 272 15 0 chr5 30906068 30906274 -172179258 + MER3 DNA MER1_type 1 209 0 1389 275 50 44 chr5 30906973 30907831 -172177701 + L1PB4 LINE L1 4 2105 -4925 8373 222 71 36 chr5 30907933 30909005 -172176527 + L1PB4 LINE L1 2350 3382 -3724 1981 155 0 0 chr5 30909005 30909301 -172176231 - AluSx SINE Alu -16 296 1 8373 222 71 36 chr5 30909301 30909756 -172175776 + L1PB4 LINE L1 3382 3819 -3287 2191 120 0 0 chr5 30909756 30910064 -172175468 + AluSg SINE Alu 1 308 -2 8373 222 71 36 chr5 30910064 30911810 -172173722 + L1PB4 LINE L1 3819 6158 -948 2530 205 23 4 chr5 30912460 30913016 -172172516 + L1PB4 LINE L1 6550 7116 0 235 270 16 0 chr5 30913138 30913201 -172172331 + MLT1F1 LTR MaLR 44 107 -460 4630 93 1 30 chr5 30913244 30913335 -172172197 + PABL_A LTR ERV1 1 93 -567 2262 92 3 0 chr5 30913335 30913638 -172171894 + AluSx SINE Alu 1 304 -8 4630 93 1 30 chr5 30913638 30914225 -172171307 + PABL_A LTR ERV1 93 660 0 2509 191 28 8 chr5 30914251 30914749 -172170783 + L1MC3 LINE L1 7260 7767 -18 598 188 15 53 chr5 30914967 30915100 -172170432 - FLAM_A SINE Alu -5 128 1 22 35 0 0 chr5 30916626 30916655 -172168877 + AT_rich Low_complexity Low_complexity 1 29 0 5198 118 14 1 chr5 30916974 30917751 -172167781 + L1PA13 LINE L1 5370 6156 -7 1422 220 28 43 chr5 30918821 30919217 -172166315 + MLT1B LTR MaLR 1 390 0 31 44 0 0 chr5 30919624 30919669 -172165863 + AT_rich Low_complexity Low_complexity 1 45 0 234 200 8 56 chr5 30919682 30919807 -172165725 + A-rich Low_complexity Low_complexity 1 119 0 248 254 18 0 chr5 30920037 30920092 -172165440 - L2 LINE L2 0 3313 3258 199 325 35 44 chr5 30920339 30920453 -172165079 + MIR SINE MIR 27 139 -123 3568 121 27 17 chr5 30920751 30921338 -172164194 + MER4E LTR ERV1 1 593 -173 514 121 17 35 chr5 30971338 30971454 -172114078 + AluYb8 SINE Alu 205 318 0 969 267 4 24 chr5 30971459 30971710 -172113822 - MLT2B1 LTR ERVL -274 246 1 949 369 42 14 chr5 30971936 30972556 -172112976 - HERV16 LTR ERVL -2249 2747 2111 921 193 10 0 chr5 30972733 30972925 -172112607 - L1M4c LINE L1 -4874 1510 1317 4239 196 7 14 chr5 30972934 30973746 -172111786 + Tigger1 DNA MER2_type 1 807 -1611 3161 242 33 33 chr5 30973894 30974910 -172110622 + L1M3 LINE L1 4417 5434 -737 2044 173 53 9 chr5 30974910 30975360 -172110172 + L1PA15 LINE L1 5693 6162 -3 340 98 233 0 chr5 30975525 30975658 -172109874 - AluYa8 SINE Alu -136 164 1 415 226 219 20 chr5 30975736 30975882 -172109650 - AluY SINE Alu 0 311 137 235 234 21 0 chr5 30975901 30975948 -172109584 + MLT2B1 LTR ERVL 303 350 -170 556 200 10 0 chr5 30976010 30976110 -172109422 + MLT2B1 LTR ERVL 342 442 -78 351 0 0 0 chr5 30976111 30976150 -172109382 + (TG)n Simple_repeat Simple_repeat 1 39 0 24 53 0 0 chr5 30977265 30977303 -172108229 + AT_rich Low_complexity Low_complexity 1 38 0 260 172 17 0 chr5 30977511 30977569 -172107963 + (TA)n Simple_repeat Simple_repeat 1 59 0 253 222 0 71 chr5 30977569 30977668 -172107864 - L1MC4 LINE L1 -1339 6703 6612 258 239 18 46 chr5 30977668 30977777 -172107755 + (TATATG)n Simple_repeat Simple_repeat 5 110 0 1176 92 0 0 chr5 30977998 30978162 -172107370 + Tigger1 DNA MER2_type 804 967 -1451 5392 210 19 11 chr5 30978167 30979304 -172106228 + Tigger1 DNA MER2_type 1265 2410 -8 4980 202 44 56 chr5 30979327 30980620 -172104912 - L1M4c LINE L1 -5093 1291 14 187 409 94 6 chr5 30980958 30981117 -172104415 - L2 LINE L2 -295 2977 2805 24 53 0 0 chr5 30981560 30981598 -172103934 + AT_rich Low_complexity Low_complexity 1 38 0 205 222 0 19 chr5 30981636 30981690 -172103842 + (TTATA)n Simple_repeat Simple_repeat 2 54 0 224 57 0 29 chr5 30981762 30981797 -172103735 + (TA)n Simple_repeat Simple_repeat 2 35 0 421 139 63 0 chr5 30981869 30981948 -172103584 - LTR54 LTR ERV1 -40 470 387 453 200 0 11 chr5 30981949 30982044 -172103488 + L1M4 LINE L1 5345 5438 -740 257 241 0 0 chr5 30982065 30982119 -172103413 + L1M4c LINE L1 294 347 -6299 2440 248 113 33 chr5 30982533 30983784 -172101748 + L1M4c LINE L1 825 2165 -4481 2088 126 0 7 chr5 30984080 30984374 -172101158 - AluSc SINE Alu -15 294 3 1229 195 132 0 chr5 30985426 30985698 -172099834 + MLT2C1 LTR ERVL 1 308 -89 239 36 36 55 chr5 30985824 30985879 -172099653 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 3422 225 31 25 chr5 30985945 30986819 -172098713 + MLT1-int LTR MaLR 4 882 -489 2858 52 11 0 chr5 30986954 30987319 -172098213 - L1PA4 LINE L1 -3 6152 5784 26 50 0 0 chr5 30987457 30987497 -172098035 + AT_rich Low_complexity Low_complexity 1 40 0 1029 236 63 53 chr5 30987613 30987942 -172097590 - L1ME3A LINE L1 -180 5990 5655 324 0 0 0 chr5 30987942 30987978 -172097554 + (TG)n Simple_repeat Simple_repeat 2 37 0 1029 236 63 53 chr5 30987978 30988046 -172097486 - L1ME3A LINE L1 -515 5655 5589 223 274 96 67 chr5 30988253 30988487 -172097045 + L2 LINE L2 2929 3216 -97 285 359 0 62 chr5 30988635 30988780 -172096752 + MIR SINE MIR 26 161 -101 2149 114 0 0 chr5 30989123 30989421 -172096111 - AluSg SINE Alu 0 310 13 3334 109 6 0 chr5 30989472 30989967 -172095565 - L1MA1 LINE L1 -1 6301 5804 978 223 47 37 chr5 30990092 30990392 -172095140 - L1MB8 LINE L1 -173 6005 5703 724 214 13 13 chr5 30990467 30990626 -172094906 - L1MB8 LINE L1 -1981 4165 4007 23 33 0 0 chr5 30991047 30991077 -172094455 + AT_rich Low_complexity Low_complexity 1 30 0 404 318 33 14 chr5 30991175 30991389 -172094143 - LTR16A1 LTR ERVL 0 457 240 22 0 0 0 chr5 30991691 30991713 -172093819 + AT_rich Low_complexity Low_complexity 1 22 0 1933 128 3 20 chr5 30992570 30992874 -172092658 - AluSg SINE Alu -8 302 4 24 32 0 0 chr5 30993090 30993121 -172092411 + AT_rich Low_complexity Low_complexity 1 31 0 865 267 22 13 chr5 30993330 30993555 -172091977 - MLT1A1 LTR MaLR 0 365 139 1524 233 46 35 chr5 30993668 30993937 -172091595 + MLT1C LTR MaLR 3 268 -199 311 0 0 25 chr5 30993937 30993977 -172091555 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1524 233 46 35 chr5 30993977 30994022 -172091510 + MLT1C LTR MaLR 268 311 -156 2024 117 7 3 chr5 30994022 30994320 -172091212 - AluSc SINE Alu -8 301 3 1524 233 46 35 chr5 30994320 30994464 -172091068 + MLT1C LTR MaLR 311 467 0 1914 134 57 33 chr5 30994505 30994871 -172090661 - THE1C LTR MaLR 0 375 1 1629 184 21 91 chr5 30995066 30995485 -172090047 + MLT1B LTR MaLR 1 390 0 351 218 0 79 chr5 30995671 30995772 -172089760 + MIR SINE MIR 167 259 -3 29 78 0 0 chr5 30996816 30996880 -172088652 + AT_rich Low_complexity Low_complexity 1 64 0 231 246 8 157 chr5 30996880 30997014 -172088518 - MER58B DNA MER1_type -4 337 224 21 0 0 0 chr5 30997647 30997668 -172087864 + AT_rich Low_complexity Low_complexity 1 21 0 340 291 33 74 chr5 30997982 30998226 -172087306 + L1M4 LINE L1 4384 4617 -1529 324 320 11 11 chr5 30998777 30998952 -172086580 + L1MEc LINE L1 1581 1755 -4641 386 259 68 63 chr5 30999086 30999291 -172086241 + L1MEc LINE L1 3194 3399 -2816 398 373 71 25 chr5 30999292 30999646 -172085886 - L2 LINE L2 -1257 2057 1688 452 316 25 31 chr5 31001235 31001431 -172084101 + L1MC4 LINE L1 6765 6959 -1083 1491 119 9 9 chr5 31001713 31001931 -172083601 + AluSx SINE Alu 62 279 -33 289 119 0 0 chr5 31001931 31001973 -172083559 + AluSc SINE Alu 160 201 -98 504 136 144 42 chr5 31001973 31002091 -172083441 + AluSg/x SINE Alu 170 299 -11 21 36 0 0 chr5 31002240 31002268 -172083264 + AT_rich Low_complexity Low_complexity 1 28 0 1421 269 10 2 chr5 31002291 31002685 -172082847 + L1MEc LINE L1 3857 4253 -1962 5762 79 2 7 chr5 31002855 31004203 -172081329 - L1PA4 LINE L1 -135 6020 4681 1228 276 21 42 chr5 31004217 31004714 -172080818 + MLT1C-int LTR MaLR 962 1735 0 732 269 153 28 chr5 31004767 31005127 -172080405 + MLT1C LTR MaLR 59 463 -4 422 281 0 0 chr5 31005373 31005504 -172080028 - L1MA10 LINE L1 -2 6332 6043 270 300 34 101 chr5 31006492 31006583 -172078949 + L1MC3 LINE L1 -100 4294967292 -5911 2816 167 0 4 chr5 31006583 31007075 -172078457 + L1PA15 LINE L1 5673 6162 -3 270 300 34 101 chr5 31007075 31007250 -172078282 + L1MC3 LINE L1 -4 148 -5759 288 215 140 32 chr5 31007284 31007377 -172078155 + L1MC3 LINE L1 276 378 -5529 1876 99 7 24 chr5 31007398 31007690 -172077842 - MER51C LTR ERV1 0 640 354 486 254 93 8 chr5 31007695 31007963 -172077569 + L1MC3 LINE L1 1841 2235 -4372 21 71 0 0 chr5 31007973 31008015 -172077517 + AT_rich Low_complexity Low_complexity 1 42 0 889 267 95 39 chr5 31008015 31008604 -172076928 + L1MC3 LINE L1 3143 3764 -2662 230 247 32 43 chr5 31008591 31008684 -172076848 + L1MC3 LINE L1 4907 4998 -1428 * 998 203 52 12 chr5 31008684 31009064 -172076468 + L1MC3 LINE L1 5420 5811 -743 * 2541 223 87 3 chr5 31009062 31009730 -172075802 + L1MC3 LINE L1 6191 6914 -1151 962 226 42 38 chr5 31009738 31010003 -172075529 - MER76 LTR ERV -8 680 415 905 280 89 35 chr5 31010104 31010507 -172075025 - MER76 LTR ERV -263 425 1 1035 194 15 20 chr5 31010508 31010709 -172074823 + L1MC3 LINE L1 6911 7110 -955 1002 205 48 4 chr5 31011217 31011485 -172074047 + L1MC3 LINE L1 7108 7387 -678 288 119 45 45 chr5 31011485 31011552 -172073980 - MLT1B LTR MaLR 0 390 324 210 158 0 0 chr5 31011858 31011896 -172073636 + A-rich Low_complexity Low_complexity 1 38 0 1857 280 39 17 chr5 31011917 31012564 -172072968 + L1MB3 LINE L1 5475 6135 -48 774 254 27 11 chr5 31012905 31013090 -172072442 - MER58A DNA MER1_type 0 224 37 630 338 43 23 chr5 31013241 31013640 -172071892 + MLT1I LTR MaLR 1 407 -2 4333 195 37 9 chr5 31014145 31014661 -172070871 - L1MA9 LINE L1 0 6312 5757 243 88 0 0 chr5 31014661 31014695 -172070837 + (TG)n Simple_repeat Simple_repeat 2 35 0 4333 195 37 9 chr5 31014695 31015094 -172070438 - L1MA9 LINE L1 -555 5757 5371 359 360 36 0 chr5 31015141 31015252 -172070280 - L1M2a LINE L1 -6739 429 315 913 156 0 11 chr5 31015383 31015562 -172069970 + CT-rich Low_complexity Low_complexity 4 180 0 195 157 0 0 chr5 31015565 31015616 -172069916 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 901 186 34 0 chr5 31015627 31015804 -172069728 - AluSg/x SINE Alu 0 312 130 26 30 0 0 chr5 31016360 31016393 -172069139 + AT_rich Low_complexity Low_complexity 1 33 0 1884 106 40 7 chr5 31017207 31017513 -172068019 + AluSx SINE Alu 1 315 0 26 30 0 0 chr5 31017877 31017910 -172067622 + AT_rich Low_complexity Low_complexity 1 33 0 312 240 0 13 chr5 31018254 31018329 -172067203 - MIR SINE MIR -16 246 173 1457 257 33 38 chr5 31018474 31019022 -172066510 - LTR55 LTR ERV -2 546 2 201 39 0 0 chr5 31019114 31019140 -172066392 + (GA)n Simple_repeat Simple_repeat 1 26 0 1346 213 78 27 chr5 31019337 31019708 -172065824 - MLT1B LTR MaLR 0 390 1 339 44 0 0 chr5 31019801 31019846 -172065686 + (TG)n Simple_repeat Simple_repeat 2 46 0 328 289 58 10 chr5 31020413 31020517 -172065015 - L2 LINE L2 -36 3277 3169 3338 182 72 49 chr5 31021311 31022169 -172063363 + L1MC3 LINE L1 6895 7772 -13 184 255 0 0 chr5 31023021 31023068 -172062464 - L2 LINE L2 0 3313 3267 4760 154 26 27 chr5 31023900 31024871 -172060661 - L1PA16 LINE L1 -10 6156 5185 338 299 97 61 chr5 31025454 31025847 -172059685 + MLT1G1 LTR MaLR 1 432 -110 1982 84 29 42 chr5 31025847 31026156 -172059376 + AluSg1 SINE Alu 1 305 -4 338 299 97 61 chr5 31026156 31026238 -172059294 + MLT1G1 LTR MaLR 432 510 -32 1941 141 44 36 chr5 31026398 31026759 -172058773 + THE1B LTR MaLR 1 364 0 2108 130 3 0 chr5 31026786 31027094 -172058438 - AluSg SINE Alu -1 309 1 2368 70 26 0 chr5 31027465 31027767 -172057765 - AluY SINE Alu -1 310 1 702 235 25 6 chr5 31027971 31028133 -172057399 - MIR SINE MIR -2 260 96 24 0 0 0 chr5 31028559 31028583 -172056949 + AT_rich Low_complexity Low_complexity 1 24 0 5735 98 9 1 chr5 31028644 31029471 -172056061 - L1PA13 LINE L1 -1 6162 5330 4120 175 21 2 chr5 31029477 31030284 -172055248 + L1PA13 LINE L1 4542 5363 -783 372 22 0 0 chr5 31030686 31030731 -172054801 + (CA)n Simple_repeat Simple_repeat 2 46 0 228 67 0 0 chr5 31032145 31032175 -172053357 + (TG)n Simple_repeat Simple_repeat 1 30 0 313 299 72 24 chr5 31032385 31032552 -172052980 - L1MEc LINE L1 -2734 3481 3307 933 228 12 69 chr5 31032564 31032703 -172052829 - L1ME2 LINE L1 -208 5956 5811 1984 145 3 0 chr5 31032703 31033014 -172052518 - AluSx SINE Alu 0 312 1 933 228 12 69 chr5 31033014 31033207 -172052325 - L1ME2 LINE L1 -353 5811 5643 1812 158 3 0 chr5 31033213 31033510 -172052022 + AluSx SINE Alu 1 298 -14 501 223 154 47 chr5 31033833 31034066 -172051466 - L1MEc LINE L1 -4558 1838 1581 1819 188 0 3 chr5 31034197 31034506 -172051026 - AluJb SINE Alu -4 308 1 1081 203 14 5 chr5 31034506 31034794 -172050738 - MLT1B LTR MaLR -59 331 3 345 188 25 12 chr5 31034795 31034875 -172050657 + MLT1B LTR MaLR 191 271 -119 2240 267 150 46 chr5 31034941 31036624 -172048908 + L1M4 LINE L1 3341 5199 -947 1007 246 38 55 chr5 31036644 31037043 -172048489 - LTR52 LTR ERVL -22 399 8 3154 205 50 15 chr5 31037046 31037944 -172047588 + L1PA16 LINE L1 5198 6157 -9 198 217 0 0 chr5 31038249 31038295 -172047237 - L3 LINE CR1 -874 703 658 21 0 0 0 chr5 31038850 31038871 -172046661 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr5 31039315 31039357 -172046175 + AT_rich Low_complexity Low_complexity 1 42 0 241 250 16 16 chr5 31040147 31040211 -172045321 + L1MEd LINE L1 565 628 -5491 1604 205 106 14 chr5 31040367 31040792 -172044740 - MLT1C LTR MaLR -3 464 1 336 297 67 55 chr5 31040824 31041230 -172044302 + L1MEd LINE L1 895 1646 -844 239 266 91 45 chr5 31041279 31041433 -172044099 - L2 LINE L2 -2418 896 736 1385 178 36 88 chr5 31041528 31041939 -172043593 - MLT1B LTR MaLR 0 390 1 411 263 87 76 chr5 31042341 31042442 -172043090 + LTR37B LTR ERV1 1 99 -369 1539 238 79 2 chr5 31042442 31042874 -172042658 + MLT1C LTR MaLR 3 467 0 411 263 87 76 chr5 31042874 31043152 -172042380 + LTR37B LTR ERV1 99 384 -84 1029 235 110 134 chr5 31043160 31043624 -172041908 - LTR40a LTR ERVL -2 460 8 198 128 0 0 chr5 31043691 31043730 -172041802 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 406 182 0 0 chr5 31043743 31043809 -172041723 + MLT1A1 LTR MaLR 1 66 -299 1352 225 11 4 chr5 31043811 31044091 -172041441 - MLT1A1-int LTR MaLR -1452 283 2 676 265 70 30 chr5 31044095 31044325 -172041207 - MLT1A1 LTR MaLR -2 363 125 1928 245 48 35 chr5 31044325 31045127 -172040405 + MLT1A1-int LTR MaLR 748 1735 0 1536 226 3 13 chr5 31045127 31045445 -172040087 + MLT1A1 LTR MaLR 1 315 -50 2897 34 3 0 chr5 31045449 31045802 -172039730 + L1PA4 LINE L1 5802 6155 0 1048 230 9 0 chr5 31045805 31046018 -172039514 + MLT1A1 LTR MaLR 144 358 -7 2027 153 117 5 chr5 31046018 31046403 -172039129 - MSTA LTR MaLR 0 428 1 580 254 0 0 chr5 31047300 31047438 -172038094 + L1M4 LINE L1 -248 4294967185 -6391 186 103 0 0 chr5 31047438 31047467 -172038065 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 2071 122 0 0 chr5 31047469 31047756 -172037776 - AluSq SINE Alu -25 288 2 1666 251 17 37 chr5 31047757 31048275 -172037257 + L1M4 LINE L1 -124 383 -5897 1282 214 98 11 chr5 31048278 31048634 -172036898 + L1M4 LINE L1 489 875 -5405 352 219 10 0 chr5 31048643 31048739 -172036793 + L1M4 LINE L1 916 1012 -5268 773 237 71 120 chr5 31048741 31049150 -172036382 - MSTD LTR MaLR -7 389 1 218 216 52 15 chr5 31049219 31049353 -172036179 + (TATAA)n Simple_repeat Simple_repeat 1 139 0 447 225 22 77 chr5 31049353 31049504 -172036028 + L1M4 LINE L1 1075 1224 -5056 2046 119 7 3 chr5 31049504 31049807 -172035725 + AluSg SINE Alu 1 304 -6 447 225 22 77 chr5 31049807 31049890 -172035642 + L1M4 LINE L1 1224 1310 -4970 522 167 50 67 chr5 31049892 31050012 -172035520 - MER76 LTR ERV -2 686 569 5141 257 75 65 chr5 31050276 31052660 -172032872 + L1M4 LINE L1 1553 3912 -2470 2156 122 0 10 chr5 31052660 31052963 -172032569 - AluSg SINE Alu -10 300 1 5141 257 75 65 chr5 31052963 31053922 -172031610 + L1M4 LINE L1 3912 5041 -1341 2409 134 3 18 chr5 31053922 31054303 -172031229 + THE1C LTR MaLR 1 375 0 5141 257 75 65 chr5 31054303 31054776 -172030756 + L1M4 LINE L1 5041 5508 -874 1122 94 0 35 chr5 31054799 31054969 -172030563 + L1PA8A LINE L1 5914 6077 -54 596 297 74 8 chr5 31055069 31055459 -172030073 + L1MB7 LINE L1 2085 2500 -3884 3160 226 33 20 chr5 31055470 31056312 -172029220 + L1MB7 LINE L1 5534 6386 -34 456 314 91 32 chr5 31057556 31057808 -172027724 + L2 LINE L2 2699 2965 -349 2511 115 14 0 chr5 31057837 31058203 -172027329 - THE1C LTR MaLR 0 375 5 9399 129 38 13 chr5 31058203 31059743 -172025789 - THE1C-int LTR MaLR 0 1580 2 2286 143 8 0 chr5 31059744 31060116 -172025416 - THE1C LTR MaLR 0 375 1 202 247 0 24 chr5 31061890 31061975 -172023557 + CT-rich Low_complexity Low_complexity 2 84 0 537 234 28 0 chr5 31062402 31062547 -172022985 - L1MA10 LINE L1 -1 6333 6185 * 634 247 46 42 chr5 31062538 31062777 -172022755 - L1ME2 LINE L1 -174 5990 5751 2652 48 0 0 chr5 31062965 31063276 -172022256 + AluY SINE Alu 1 311 0 318 101 0 130 chr5 31064148 31064217 -172021315 + HY4 scRNA scRNA 34 93 0 24 0 0 0 chr5 31064217 31064241 -172021291 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 31065505 31065529 -172020003 + AT_rich Low_complexity Low_complexity 1 24 0 207 347 54 54 chr5 31066498 31066645 -172018887 - MIR3 SINE MIR -55 153 7 180 421 7 21 chr5 31067396 31067536 -172017996 - L3 LINE CR1 -855 722 585 23 0 0 0 chr5 31067866 31067889 -172017643 + AT_rich Low_complexity Low_complexity 1 23 0 1199 264 52 92 chr5 31068387 31069005 -172016527 - MLT1E LTR MaLR 0 593 1 198 0 0 0 chr5 31069223 31069245 -172016287 + (TC)n Simple_repeat Simple_repeat 1 22 0 782 220 117 7 chr5 31069280 31069571 -172015961 - MER33 DNA MER1_type -1 323 1 945 324 27 38 chr5 31069610 31070057 -172015475 + L1MA6 LINE L1 1542 1983 -5503 4451 233 74 49 chr5 31070394 31073373 -172012159 + L1MA6 LINE L1 1929 5002 -2563 * 4504 186 47 33 chr5 31073363 31075330 -172010202 + L1MA6 LINE L1 5718 7717 -2 21 0 0 0 chr5 31075338 31075359 -172010173 + AT_rich Low_complexity Low_complexity 1 21 0 1500 184 88 25 chr5 31075528 31075881 -172009651 - THE1C LTR MaLR 0 375 1 6997 158 32 8 chr5 31076222 31077491 -172008041 - HSMAR2 DNA Mariner -1 1301 2 29 0 0 0 chr5 31077654 31077683 -172007849 + AT_rich Low_complexity Low_complexity 1 29 0 263 222 69 0 chr5 31077712 31077784 -172007748 + L1M2 LINE L1 5106 5182 -964 1873 127 66 61 chr5 31077784 31078146 -172007386 + THE1B LTR MaLR 1 364 0 8218 122 17 2 chr5 31078173 31079422 -172006110 + THE1B-int LTR MaLR 15 1281 -299 866 163 11 37 chr5 31079528 31079718 -172005814 + L1M2 LINE L1 5258 5442 -858 22 0 0 0 chr5 31079770 31079792 -172005740 + AT_rich Low_complexity Low_complexity 1 22 0 253 256 23 12 chr5 31079886 31079972 -172005560 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 335 269 128 32 chr5 31079988 31080144 -172005388 - MIR SINE MIR -61 201 31 2082 153 15 26 chr5 31080237 31081048 -172004484 - L1PA16 LINE L1 -3 6163 5295 2618 211 10 50 chr5 31081051 31081611 -172003921 - L1PA16 LINE L1 -1070 5076 4550 2413 69 0 7 chr5 31081611 31081915 -172003617 - AluY SINE Alu -9 302 1 2618 211 10 50 chr5 31081915 31082081 -172003451 - L1PA16 LINE L1 -1596 4550 4379 710 157 0 0 chr5 31082095 31082216 -172003316 - L1PB1 LINE L1 -1 6150 6030 1252 155 4 17 chr5 31082219 31082451 -172003081 + L1 LINE L1 3974 4202 -1944 * 2240 225 41 2 chr5 31082437 31082996 -172002536 - L1 LINE L1 -1764 4382 3802 258 32 0 0 chr5 31083046 31083077 -172002455 + (T)n Simple_repeat Simple_repeat 1 31 0 619 288 36 39 chr5 31083547 31083856 -172001676 + MER97c DNA MER1_type? 265 572 -518 304 237 44 104 chr5 31083928 31084198 -172001334 + MER97c DNA MER1_type? 830 1083 -7 2038 122 16 3 chr5 31084388 31084505 -172001027 + AluSg SINE Alu 1 115 -195 224 75 0 25 chr5 31084505 31084545 -172000987 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2038 122 16 3 chr5 31084545 31084730 -172000802 + AluSg SINE Alu 115 307 -3 1961 203 5 9 chr5 31084838 31085272 -172000260 + L1MA5 LINE L1 5864 6295 -5 2327 57 3 13 chr5 31085817 31086116 -171999416 - AluY SINE Alu -12 299 4 509 158 0 11 chr5 31086364 31086459 -171999073 + AluY SINE Alu 1 94 -224 876 181 69 81 chr5 31086473 31086733 -171998799 - MER44D DNA MER2_type -81 528 2 261 119 0 0 chr5 31086755 31086797 -171998735 + (TA)n Simple_repeat Simple_repeat 2 43 0 476 127 25 13 chr5 31087547 31087626 -171997906 - L1MA5 LINE L1 -439 5861 5782 659 313 72 50 chr5 31087626 31088152 -171997380 + ERVL LTR ERVL 2211 2746 -2739 717 269 5 5 chr5 31088378 31088571 -171996961 + MLT2B1 LTR ERVL 1 193 -327 2123 221 44 27 chr5 31088575 31089099 -171996433 - L1 LINE L1 -3237 2909 2377 3162 177 17 22 chr5 31089138 31089948 -171995584 + L1MA8 LINE L1 5152 5956 -335 777 216 40 0 chr5 31089952 31090151 -171995381 + L1MA8 LINE L1 6082 6288 -3 22 70 0 0 chr5 31091209 31091252 -171994280 + AT_rich Low_complexity Low_complexity 1 43 0 979 221 76 92 chr5 31091595 31091939 -171993593 + MLT1A2 LTR MaLR 1 349 -25 361 0 20 20 chr5 31091939 31091989 -171993543 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1389 30 0 0 chr5 31091989 31092154 -171993378 - L1PA3 LINE L1 -16 6139 5975 979 221 76 92 chr5 31092154 31092188 -171993344 + MLT1A2 LTR MaLR 347 374 0 21 36 0 0 chr5 31092988 31093016 -171992516 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 31093042 31093070 -171992462 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 31093203 31093239 -171992293 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 31094736 31094773 -171990759 + AT_rich Low_complexity Low_complexity 1 37 0 306 0 0 0 chr5 31094842 31094876 -171990656 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 11365 35 0 1 chr5 31094879 31097011 -171988521 - L1PA4 LINE L1 -8 6147 4017 255 56 28 0 chr5 31097012 31097048 -171988484 + L1PA4 LINE L1 3972 4008 -2138 289 75 38 0 chr5 31097263 31097316 -171988216 + (TG)n Simple_repeat Simple_repeat 2 56 0 204 189 40 27 chr5 31097536 31097610 -171987922 + (TA)n Simple_repeat Simple_repeat 1 75 0 213 154 0 0 chr5 31097613 31097652 -171987880 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 2625 271 48 40 chr5 31097747 31098738 -171986794 + L1MC2 LINE L1 16 1014 -5528 5281 246 52 23 chr5 31098741 31101820 -171983712 + L1MC2 LINE L1 3659 6819 -23 2462 280 90 24 chr5 31101812 31103212 -171982320 + L1M4 LINE L1 3330 4822 -1324 * 362 219 83 10 chr5 31103213 31103309 -171982223 + MLT2B1 LTR ERVL 2 104 -416 2173 283 59 2 chr5 31103722 31104636 -171980896 - L1M4 LINE L1 -3009 3137 2172 317 169 0 145 chr5 31104705 31104829 -171980703 - L1M4 LINE L1 -3261 2885 2780 345 245 59 10 chr5 31104833 31104935 -171980597 + MLT1E LTR MaLR 479 585 -8 2317 202 96 2 chr5 31106412 31106913 -171978619 + MER44D DNA MER2_type 2 604 -1 1430 212 59 52 chr5 31107243 31107668 -171977864 - MSTC LTR MaLR 0 428 1 2172 101 7 0 chr5 31108464 31108762 -171976770 - AluSx SINE Alu -8 304 5 26 30 0 0 chr5 31109513 31109546 -171975986 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr5 31109576 31109612 -171975920 + AT_rich Low_complexity Low_complexity 1 36 0 1627 138 51 0 chr5 31109612 31109865 -171975667 - AluSg SINE Alu -1 309 44 1821 212 52 63 chr5 31109976 31110593 -171974939 + LTR65 LTR ERV1 3 612 -57 410 297 99 24 chr5 31110677 31110970 -171974562 - L2 LINE L2 -61 3252 2938 328 250 0 0 chr5 31111196 31111272 -171974260 - L2 LINE L2 -835 2479 2404 402 352 42 26 chr5 31111315 31111625 -171973907 + L1MEc LINE L1 73 387 -6009 312 191 16 0 chr5 31112197 31112260 -171973272 + MLT1G1 LTR MaLR 516 579 -16 650 250 159 49 chr5 31113019 31113738 -171971794 + L1M4 LINE L1 2657 3454 -2692 665 298 114 41 chr5 31113770 31114315 -171971217 + L1M4 LINE L1 3625 4228 -1918 1565 205 3 0 chr5 31114315 31114603 -171970929 - AluJb SINE Alu -21 291 3 665 298 114 41 chr5 31114603 31114714 -171970818 + L1M4 LINE L1 4228 4329 -1817 201 222 0 22 chr5 31114728 31114773 -171970759 + (TA)n Simple_repeat Simple_repeat 1 44 0 361 275 70 12 chr5 31114986 31115157 -171970375 + L1M4 LINE L1 4413 4593 -1553 286 301 68 28 chr5 31115162 31115338 -171970194 + L1M4 LINE L1 4545 4727 -1419 1341 197 7 7 chr5 31115385 31115669 -171969863 + L1 LINE L1 4537 4820 -1326 7958 189 15 2 chr5 31115669 31118098 -171967434 + L1PA13 LINE L1 3686 6153 -10 237 129 43 29 chr5 31118357 31118427 -171967105 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 293 194 174 0 chr5 31118434 31118532 -171967000 + L1MC4 LINE L1 7914 8028 -14 26 64 0 0 chr5 31118663 31118710 -171966822 + AT_rich Low_complexity Low_complexity 1 47 0 27 62 0 0 chr5 31119630 31119678 -171965854 + AT_rich Low_complexity Low_complexity 1 48 0 357 200 51 126 chr5 31119870 31120045 -171965487 - LTR52 LTR ERVL -4 417 256 10353 249 31 19 chr5 31120080 31124632 -171960900 + L1PA15 LINE L1 2 4817 -1980 254 262 35 43 chr5 31124646 31124787 -171960745 - THE1C LTR MaLR 0 375 236 1377 164 102 31 chr5 31125126 31125450 -171960082 - THE1C LTR MaLR -26 349 3 5259 188 20 9 chr5 31125459 31127000 -171958532 + L1PA15 LINE L1 4830 6390 -426 233 109 22 0 chr5 31127007 31127053 -171958479 + (TA)n Simple_repeat Simple_repeat 2 48 0 313 238 93 75 chr5 31127053 31127267 -171958265 + L1MCa LINE L1 1986 2203 -4223 28 0 0 0 chr5 31127267 31127295 -171958237 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr5 31127323 31127362 -171958170 + (CA)n Simple_repeat Simple_repeat 2 40 0 2077 155 0 29 chr5 31127362 31127743 -171957789 + L1PA15 LINE L1 6445 6814 -2 682 265 60 17 chr5 31127751 31127985 -171957547 - LTR52 LTR ERVL -177 244 1 183 204 0 0 chr5 31128669 31128713 -171956819 + (TA)n Simple_repeat Simple_repeat 2 45 0 25 0 0 0 chr5 31128741 31128766 -171956766 + AT_rich Low_complexity Low_complexity 1 25 0 234 113 48 16 chr5 31128866 31128966 -171956566 + (TA)n Simple_repeat Simple_repeat 1 103 0 507 309 164 4 chr5 31129580 31129849 -171955683 + MLT2E LTR ERVL 188 499 -129 273 296 27 9 chr5 31130144 31130260 -171955272 + L1MEc LINE L1 1532 1673 -903 455 280 62 15 chr5 31130537 31130784 -171954748 - L1ME1 LINE L1 -237 5927 5679 321 303 16 9 chr5 31130982 31131122 -171954410 - L1ME1 LINE L1 -704 5474 5334 637 271 29 45 chr5 31131126 31131370 -171954162 + Charlie1 DNA MER1_type 1764 2003 -758 2913 40 0 0 chr5 31132130 31132479 -171953053 - L1PA3 LINE L1 -186 5969 5620 1377 48 0 0 chr5 31132479 31132645 -171952887 + L1PA3 LINE L1 5988 6155 0 24 77 0 0 chr5 31132908 31132960 -171952572 + AT_rich Low_complexity Low_complexity 1 52 0 24 32 0 0 chr5 31133120 31133151 -171952381 + AT_rich Low_complexity Low_complexity 1 31 0 825 199 70 0 chr5 31133160 31133346 -171952186 - L1MA5A LINE L1 -101 6196 5998 692 236 6 36 chr5 31133373 31133538 -171951994 + FRAM SINE Alu 1 160 -6 27 0 0 0 chr5 31133557 31133584 -171951948 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr5 31133652 31133679 -171951853 + AT_rich Low_complexity Low_complexity 1 27 0 235 323 21 85 chr5 31134663 31134852 -171950680 - MIR SINE MIR -71 191 15 21 71 0 0 chr5 31135400 31135442 -171950090 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr5 31135712 31135742 -171949790 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr5 31135785 31135812 -171949720 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr5 31135992 31136021 -171949511 + AT_rich Low_complexity Low_complexity 1 29 0 450 178 0 0 chr5 31136148 31136238 -171949294 + (TG)n Simple_repeat Simple_repeat 1 90 0 1666 196 18 67 chr5 31136280 31136725 -171948807 + L1MB3 LINE L1 5273 5695 -473 262 200 0 67 chr5 31136735 31136810 -171948722 + L1MB3 LINE L1 5964 6033 -150 1996 194 60 21 chr5 31136843 31137308 -171948224 + L1MB3 LINE L1 5698 6180 -3 5906 86 9 4 chr5 31137739 31138553 -171946979 - L1PA7 LINE L1 -4 6150 5333 * 7275 95 14 20 chr5 31138548 31139666 -171945866 + L1PA7 LINE L1 4228 5339 -807 36 23 0 0 chr5 31140196 31140239 -171945293 + AT_rich Low_complexity Low_complexity 1 43 0 1828 149 38 0 chr5 31140293 31140582 -171944950 - AluSq SINE Alu -13 300 1 697 175 8 8 chr5 31140681 31140801 -171944731 + AluSg/x SINE Alu 129 248 -64 29 28 0 0 chr5 31140882 31140918 -171944614 + AT_rich Low_complexity Low_complexity 1 36 0 241 196 36 0 chr5 31140968 31141024 -171944508 + GA-rich Low_complexity Low_complexity 2 59 0 27 49 0 0 chr5 31141049 31141090 -171944442 + AT_rich Low_complexity Low_complexity 1 41 0 301 292 146 42 chr5 31141161 31141798 -171943734 + L1M4 LINE L1 4144 4846 -1300 261 0 0 0 chr5 31141900 31141929 -171943603 + (CA)n Simple_repeat Simple_repeat 2 30 0 24 67 0 0 chr5 31141955 31142000 -171943532 + AT_rich Low_complexity Low_complexity 1 45 0 227 161 0 16 chr5 31142440 31142502 -171943030 + (TA)n Simple_repeat Simple_repeat 2 62 0 307 194 65 0 chr5 31142503 31142611 -171942921 + (TAGA)n Simple_repeat Simple_repeat 2 116 0 2164 195 40 18 chr5 31142618 31143116 -171942416 - LTR22 LTR ERVK 0 509 1 52 41 0 0 chr5 31145556 31145629 -171939903 + AT_rich Low_complexity Low_complexity 1 73 0 1375 234 18 37 chr5 31146243 31146624 -171938908 + MLT1A2 LTR MaLR 1 374 0 415 27 68 0 chr5 31146754 31146827 -171938705 + (TAGA)n Simple_repeat Simple_repeat 3 80 0 870 258 47 16 chr5 31147244 31147558 -171937974 + MER74C LTR ERVL 13 419 -139 8781 222 20 8 chr5 31148085 31150391 -171935141 - L1PA16 LINE L1 -727 5439 3112 3551 174 39 4 chr5 31150396 31151092 -171934440 + L1PA16 LINE L1 5438 6157 -9 40 49 0 0 chr5 31151498 31151559 -171933973 + AT_rich Low_complexity Low_complexity 1 61 0 21 89 0 0 chr5 31151614 31151670 -171933862 + AT_rich Low_complexity Low_complexity 1 56 0 2392 48 0 7 chr5 31151989 31152284 -171933248 + AluY SINE Alu 1 293 -18 21 0 0 0 chr5 31152780 31152801 -171932731 + AT_rich Low_complexity Low_complexity 1 21 0 241 337 116 39 chr5 31152876 31153134 -171932398 - L2 LINE L2 -851 2463 2186 2025 107 0 38 chr5 31153363 31153681 -171931851 - AluSg SINE Alu -2 308 3 284 0 28 0 chr5 31153681 31153717 -171931815 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 296 111 37 0 chr5 31153800 31153854 -171931678 - L1MD3 LINE L1 -10 7985 7930 342 45 0 0 chr5 31153899 31153943 -171931589 + (TG)n Simple_repeat Simple_repeat 2 45 0 210 339 48 40 chr5 31155901 31156025 -171929507 + MIR SINE MIR 34 158 -104 1927 138 0 28 chr5 31156960 31157279 -171928253 + AluSq SINE Alu 1 310 -3 480 279 182 34 chr5 31157470 31157821 -171927711 - HAL1 LINE L1 -373 2134 1732 372 175 0 0 chr5 31157872 31157929 -171927603 - AluJ/FLAM SINE Alu -245 57 1 867 206 6 0 chr5 31158216 31158376 -171927156 + MSTD LTR MaLR 1 161 -235 283 211 0 28 chr5 31158478 31158549 -171926983 + MSTD LTR MaLR 325 393 -3 2387 209 76 52 chr5 31158652 31159428 -171926104 - L1MCa LINE L1 -4493 2071 1176 1484 254 14 6 chr5 31159428 31159790 -171925742 - MLT1A1 LTR MaLR 0 365 1 2387 209 76 52 chr5 31159790 31160007 -171925525 - L1MCa LINE L1 -5388 1176 966 180 0 0 0 chr5 31160012 31160032 -171925500 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 631 202 0 0 chr5 31160039 31160148 -171925384 - AluJb SINE Alu -182 130 22 2571 246 44 71 chr5 31160148 31161069 -171924463 - L1MCa LINE L1 -5165 894 3 2118 126 3 0 chr5 31161270 31161572 -171923960 - AluSp SINE Alu -10 303 1 1033 271 97 30 chr5 31161805 31162267 -171923265 - MLT1D LTR MaLR 0 505 13 294 392 59 5 chr5 31164589 31164811 -171920721 - MIR SINE MIR -5 257 24 225 315 75 55 chr5 31219168 31219368 -171866164 + L1MEd LINE L1 311 514 -5605 455 315 70 73 chr5 31219431 31219872 -171865660 + L1MEd LINE L1 569 1008 -5111 292 320 48 81 chr5 31220954 31221226 -171864306 + ERVL LTR ERVL 2025 2287 -3367 201 212 0 61 chr5 31221373 31221472 -171864060 + (CACTT)n Simple_repeat Simple_repeat 5 97 0 228 213 37 37 chr5 31221546 31221682 -171863850 + (TTTCG)n Simple_repeat Simple_repeat 4 139 0 857 113 0 7 chr5 31221722 31221864 -171863668 + (TTTC)n Simple_repeat Simple_repeat 3 143 0 1828 164 0 0 chr5 31221869 31222144 -171863388 - AluSx SINE Alu -37 275 1 453 373 89 19 chr5 31222668 31223218 -171862314 + ERVL LTR ERVL 2864 3490 -1902 284 397 14 0 chr5 31223255 31223396 -171862136 + ERVL LTR ERVL 3567 3709 -2055 661 354 86 3 chr5 31223743 31224079 -171861453 + ERVL LTR ERVL 4084 4447 -1317 207 0 0 0 chr5 31224323 31224346 -171861186 + (CAA)n Simple_repeat Simple_repeat 2 24 0 234 158 0 70 chr5 31225621 31225678 -171859854 - MLT2D LTR ERVL -4 511 459 292 134 60 0 chr5 31225679 31225746 -171859786 + (CATA)n Simple_repeat Simple_repeat 2 72 0 1387 222 80 5 chr5 31225757 31226109 -171859423 - MLT2D LTR ERVL -40 480 1 1337 37 0 0 chr5 31226131 31226294 -171859238 - L1PA5 LINE L1 -4 6150 5988 31 0 0 0 chr5 31226295 31226326 -171859206 + AT_rich Low_complexity Low_complexity 1 31 0 378 311 69 72 chr5 31226509 31226885 -171858647 + L1ME LINE L1 3580 3954 -2192 328 299 106 15 chr5 31226923 31227098 -171858434 + L1ME LINE L1 5401 5591 -571 472 89 25 0 chr5 31227727 31227806 -171857726 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 341 250 0 17 chr5 31227806 31227926 -171857606 + GA-rich Low_complexity Low_complexity 2 119 0 245 325 12 0 chr5 31228712 31228795 -171856737 + MIR SINE MIR 178 261 -1 518 57 0 66 chr5 31228903 31229009 -171856523 - AluY SINE Alu 0 311 213 23 55 0 18 chr5 31229240 31229276 -171856256 + AT_rich Low_complexity Low_complexity 1 37 -17 2099 102 3 23 chr5 31229276 31229580 -171855952 - AluSq SINE Alu -15 298 1 23 55 0 18 chr5 31229580 31229598 -171855934 + AT_rich Low_complexity Low_complexity 37 54 0 334 291 18 0 chr5 31229956 31230066 -171855466 - L1M4 LINE L1 -1537 4609 4498 1191 247 85 14 chr5 31230198 31230562 -171854970 + MLT1B LTR MaLR 1 390 0 354 195 13 0 chr5 31230640 31230717 -171854815 - L1PA16 LINE L1 0 6166 6089 1017 269 71 68 chr5 31231416 31231665 -171853867 - L1ME3A LINE L1 -5 6165 5918 2063 205 35 55 chr5 31231665 31232230 -171853302 + MLT2B3 LTR ERVL 1 554 0 1017 269 71 68 chr5 31232230 31232652 -171852880 - L1ME3A LINE L1 -252 5918 5492 535 26 105 0 chr5 31232662 31232738 -171852794 - L1PA4 LINE L1 -3 6152 6069 484 65 0 0 chr5 31232738 31232800 -171852732 + L1PA3 LINE L1 6009 6070 -85 23 0 0 0 chr5 31234757 31234780 -171850752 + AT_rich Low_complexity Low_complexity 1 23 0 240 265 54 41 chr5 31234809 31235000 -171850532 - L1M3 LINE L1 -666 5514 5317 544 329 48 27 chr5 31235285 31235577 -171849955 + MLT1G1 LTR MaLR 13 310 -285 281 51 0 0 chr5 31235579 31235618 -171849914 - MADE1 DNA Mariner 0 80 42 1822 144 0 0 chr5 31236199 31236470 -171849062 + AluSg SINE Alu 1 271 -39 228 209 152 9 chr5 31236516 31236621 -171848911 - L1M4 LINE L1 -1717 4429 4310 30 77 0 0 chr5 31236653 31236718 -171848814 + AT_rich Low_complexity Low_complexity 1 65 0 1223 215 61 25 chr5 31236770 31237049 -171848483 + AluJo SINE Alu 1 289 -13 35 24 0 0 chr5 31237258 31237300 -171848232 + AT_rich Low_complexity Low_complexity 1 42 0 206 222 0 0 chr5 31237854 31237890 -171847642 + (CACG)n Simple_repeat Simple_repeat 3 38 0 479 333 11 6 chr5 31238018 31238195 -171847337 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr5 31238997 31239019 -171846513 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 31239142 31239191 -171846341 + AT_rich Low_complexity Low_complexity 1 49 0 2004 249 30 14 chr5 31239917 31240415 -171845117 + LTR53 LTR ERVL 14 519 0 1049 192 0 0 chr5 31240565 31240768 -171844764 + L1PA15 LINE L1 4697 4899 -1247 2067 140 27 30 chr5 31240768 31241133 -171844399 - THE1B LTR MaLR 0 364 1 5839 126 0 2 chr5 31241133 31241967 -171843565 - THE1B-int LTR MaLR 0 1580 749 244 75 25 25 chr5 31242226 31242266 -171843266 - THE1B LTR MaLR -324 40 1 4808 184 19 34 chr5 31242266 31243565 -171841967 + L1PA15 LINE L1 4895 6162 -3 1060 182 35 13 chr5 31244333 31244564 -171840968 - L1M3 LINE L1 -365 5803 5568 657 232 57 0 chr5 31244561 31244738 -171840794 + L1MB1 LINE L1 5865 6051 -117 * 14070 213 31 11 chr5 31244758 31249919 -171835613 + L1PA13 LINE L1 2 5501 -1296 4073 136 3 10 chr5 31249926 31250542 -171834990 - LTR9 LTR ERV1 0 612 1 11638 156 10 37 chr5 31250545 31252629 -171832903 - HUERS-P3 LTR ERV1 -4 8915 6889 6513 149 29 9 chr5 31252623 31253681 -171831851 - HUERS-P3 LTR ERV1 -2264 6655 5577 * 312 345 69 32 chr5 31254027 31254273 -171831259 - L1MEd LINE L1 -5595 524 270 2142 105 0 3 chr5 31254339 31254633 -171830899 + AluSq SINE Alu 1 293 -20 31 0 0 0 chr5 31254633 31254664 -171830868 + AT_rich Low_complexity Low_complexity 1 31 0 414 0 0 0 chr5 31254787 31254833 -171830699 + (TG)n Simple_repeat Simple_repeat 2 47 0 1277 205 78 53 chr5 31254880 31255241 -171830291 - MLT1A2 LTR MaLR 0 374 5 1008 93 0 7 chr5 31255285 31255424 -171830108 + AluSp/q SINE Alu 166 303 -10 27 0 0 0 chr5 31255424 31255451 -171830081 + AT_rich Low_complexity Low_complexity 1 27 0 2800 206 48 13 chr5 31256001 31256687 -171828845 - MER67C LTR ERV1 0 710 1 2329 75 0 10 chr5 31256924 31257229 -171828303 - AluY SINE Alu -9 302 1 609 266 116 10 chr5 31257996 31258203 -171827329 + Charlie1b DNA MER1_type 7 235 -288 735 249 23 0 chr5 31258203 31258420 -171827112 + MER33 DNA MER1_type 1 222 -102 2379 147 25 23 chr5 31258625 31259066 -171826466 - LTR56 LTR ERV1 -3 442 1 5169 181 50 75 chr5 31259123 31260723 -171824809 - LTR49-int LTR ERV1 -1377 3746 2100 1766 149 59 0 chr5 31260723 31261012 -171824520 - AluSg SINE Alu -4 306 1 5169 181 50 75 chr5 31261012 31261398 -171824134 - LTR49-int LTR ERV1 -3023 2100 1706 346 299 9 9 chr5 31261517 31261624 -171823908 - LTR49-int LTR ERV1 -2884 3447 3341 3889 230 36 36 chr5 31261666 31263111 -171822421 - LTR49-int LTR ERV1 -2994 3337 1894 1474 185 34 24 chr5 31263111 31263408 -171822124 - AluJo SINE Alu -11 301 2 3889 230 36 36 chr5 31263408 31263438 -171822094 - LTR49-int LTR ERV1 -4437 1894 1866 2392 88 3 3 chr5 31263438 31263746 -171821786 - AluSx SINE Alu -4 308 1 3889 230 36 36 chr5 31263746 31263856 -171821676 - LTR49-int LTR ERV1 -4465 1866 1673 244 183 21 0 chr5 31263873 31263966 -171821566 + (TA)n Simple_repeat Simple_repeat 1 95 0 667 162 22 31 chr5 31264001 31264191 -171821341 - LTR49-int LTR ERV1 -4670 1661 1001 375 225 14 0 chr5 31264232 31264303 -171821229 - tRNA-Glu-GAG tRNA tRNA -2 73 2 304 274 12 12 chr5 31264344 31264428 -171821104 - LTR49-int LTR ERV1 -5132 1199 1116 345 184 79 0 chr5 31264546 31264622 -171820910 - LTR49-int LTR ERV1 -3670 1201 1120 297 250 25 25 chr5 31264666 31264746 -171820786 - MER57A LTR ERV1 -40 363 284 947 136 142 0 chr5 31264849 31265018 -171820514 + MSTA LTR MaLR 236 428 0 1243 260 81 50 chr5 31265793 31266297 -171819235 + MLT1E LTR MaLR 72 591 -2 32 43 0 0 chr5 31266607 31266653 -171818879 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 31266695 31266716 -171818816 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 31267038 31267075 -171818457 + AT_rich Low_complexity Low_complexity 1 37 0 1859 177 94 31 chr5 31267480 31267893 -171817639 - Tigger2 DNA MER2_type 0 2718 2280 291 261 0 0 chr5 31267891 31267956 -171817576 - Tigger2 DNA MER2_type -2649 69 5 * 33 25 0 0 chr5 31268615 31268655 -171816877 + AT_rich Low_complexity Low_complexity 1 40 0 212 271 176 41 chr5 31269395 31269565 -171815967 - L2 LINE L2 -836 2478 2286 30 0 0 0 chr5 31269866 31269896 -171815636 + AT_rich Low_complexity Low_complexity 1 30 0 223 303 8 42 chr5 31270006 31270125 -171815407 - L2 LINE L2 -541 2773 2659 1684 141 60 43 chr5 31270271 31270640 -171814892 - THE1C LTR MaLR 0 375 1 432 82 0 0 chr5 31271226 31271287 -171814245 + (CA)n Simple_repeat Simple_repeat 2 62 0 352 321 48 96 chr5 31271429 31271784 -171813748 - MLT1J1 LTR MaLR -44 402 65 185 276 92 11 chr5 31271877 31271964 -171813568 + MIR SINE MIR 124 217 -45 24 32 0 0 chr5 31273109 31273140 -171812392 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr5 31273641 31273668 -171811864 + AT_rich Low_complexity Low_complexity 1 27 0 2152 109 0 10 chr5 31273923 31274227 -171811305 + AluSq SINE Alu 1 301 -12 711 235 207 22 chr5 31274528 31274851 -171810681 - L1ME1 LINE L1 -44 6122 5740 964 92 0 157 chr5 31276060 31276289 -171809243 + 7SK RNA RNA 1 193 0 25 90 0 0 chr5 31276297 31276364 -171809168 + AT_rich Low_complexity Low_complexity 1 67 0 1897 233 61 38 chr5 31276368 31276845 -171808687 - MER70B LTR ERVL -1 577 90 737 229 13 6 chr5 31276841 31276998 -171808534 - MER70B LTR ERVL -416 162 5 * 1532 268 29 29 chr5 31277002 31277514 -171808018 - L1MD2 LINE L1 -34 6325 5814 1022 254 150 31 chr5 31278337 31278691 -171806841 + MSTD LTR MaLR 1 396 0 237 278 40 48 chr5 31278691 31278800 -171806732 + MLT1F1 LTR MaLR 92 199 -343 1203 231 128 14 chr5 31278819 31279170 -171806362 + MLT1F1 LTR MaLR 177 567 0 615 332 22 25 chr5 31279321 31279676 -171805856 + MLT1F1-int LTR MaLR 248 601 -770 482 301 112 39 chr5 31280048 31280334 -171805198 + L2 LINE L2 2537 2843 -471 180 0 0 0 chr5 31280678 31280698 -171804834 + (TAA)n Simple_repeat Simple_repeat 2 21 0 679 270 44 14 chr5 31280830 31281146 -171804386 - MER93b LTR ERV1 -1 372 15 809 130 0 0 chr5 31281304 31281419 -171804113 - AluSq/x SINE Alu -198 115 1 677 117 0 0 chr5 31281427 31281530 -171804002 - AluSp/q SINE Alu -2 311 209 29 78 0 0 chr5 31281549 31281613 -171803919 + AT_rich Low_complexity Low_complexity 1 64 0 912 227 65 47 chr5 31283106 31283489 -171802043 - MLT1B LTR MaLR 0 390 1 1293 293 89 13 chr5 31284523 31285044 -171800488 + MLT1E LTR MaLR 15 591 -2 953 273 13 61 chr5 31285152 31285548 -171799984 + MLT2C1 LTR ERVL 18 394 -3 546 332 42 24 chr5 31285551 31286036 -171799496 + HERVL-C1 LTR ERVL 1 511 -5253 24 67 0 0 chr5 31286157 31286202 -171799330 + AT_rich Low_complexity Low_complexity 1 45 0 15072 184 41 5 chr5 31286454 31289257 -171796275 + L1M1 LINE L1 15 2921 -4644 315 0 0 0 chr5 31289257 31289292 -171796240 + (CAA)n Simple_repeat Simple_repeat 2 36 0 15072 184 41 5 chr5 31289292 31289318 -171796214 + L1M1 LINE L1 2921 2945 -4620 2395 189 104 21 chr5 31289318 31289972 -171795560 - LTR28 LTR ERV1 -3 633 1 3454 186 47 54 chr5 31289972 31290440 -171795092 + L1M1 LINE L1 2877 3347 -4218 1656 169 7 27 chr5 31290440 31290736 -171794796 + AluSx SINE Alu 1 290 -22 3454 186 47 54 chr5 31290736 31291709 -171793823 + L1M1 LINE L1 3347 4316 -3249 416 106 0 0 chr5 31291710 31291776 -171793756 + L1M LINE L1 5265 5330 -975 645 107 18 9 chr5 31291776 31291888 -171793644 + L1MA3 LINE L1 6188 6300 -5 569 299 44 13 chr5 31292539 31292826 -171792706 + L1ME1 LINE L1 4760 5063 -1083 2934 210 30 7 chr5 31292872 31293605 -171791927 + L1PA13 LINE L1 2264 3013 -3133 9727 203 6 3 chr5 31293606 31296548 -171788984 + L1PA13 LINE L1 3230 6152 -11 1366 278 79 27 chr5 31296684 31297513 -171788019 + L1ME1 LINE L1 5209 6078 -88 1498 332 66 16 chr5 31297819 31298606 -171786926 - HERVL LTR ERVL -1128 4526 3701 321 261 134 7 chr5 31298730 31298872 -171786660 + L1MA5 LINE L1 4294 4453 -1693 755 176 152 0 chr5 31299139 31299257 -171786275 + MER3 DNA MER1_type 12 163 -46 233 29 29 0 chr5 31299257 31299291 -171786241 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 755 176 152 0 chr5 31299291 31299337 -171786195 + MER3 DNA MER1_type 163 201 -8 331 306 67 78 chr5 31299591 31299762 -171785770 + MLT1H LTR MaLR 71 240 -309 2260 224 22 4 chr5 31299762 31300226 -171785306 - MER70A LTR ERVL 0 472 1 331 306 67 78 chr5 31300226 31300309 -171785223 + MLT1H LTR MaLR 240 322 -227 511 240 24 0 chr5 31300472 31300597 -171784935 + MLT1H LTR MaLR 420 547 -2 3973 213 42 0 chr5 31300635 31301467 -171784065 - L1 LINE L1 -1980 4166 3300 5051 156 26 64 chr5 31301470 31302695 -171782837 + L1MA5 LINE L1 5119 6299 -1 812 195 12 35 chr5 31303207 31303376 -171782156 + FAM SINE Alu 1 165 -10 252 0 0 0 chr5 31303809 31303837 -171781695 + (CA)n Simple_repeat Simple_repeat 1 28 0 392 284 37 43 chr5 31303841 31304100 -171781432 - MLT1I LTR MaLR -88 321 72 21 0 0 0 chr5 31305151 31305172 -171780360 + AT_rich Low_complexity Low_complexity 1 21 0 188 184 11 58 chr5 31305407 31305494 -171780038 + GA-rich Low_complexity Low_complexity 1 83 0 1105 196 19 169 chr5 31306334 31306660 -171778872 - MLT1C LTR MaLR -30 437 214 2160 118 0 3 chr5 31306660 31306974 -171778558 - AluSq SINE Alu 0 313 1 1105 196 19 169 chr5 31306974 31307161 -171778371 - MLT1C LTR MaLR -253 214 1 2099 132 3 7 chr5 31307335 31307645 -171777887 + AluSq SINE Alu 3 311 -2 23 78 0 0 chr5 31307685 31307736 -171777796 + AT_rich Low_complexity Low_complexity 1 51 0 305 241 46 0 chr5 31308404 31308491 -171777041 + L1MC4 LINE L1 6613 6703 -1339 1457 180 0 73 chr5 31308550 31308867 -171776665 - AluJo SINE Alu -16 296 3 284 355 69 10 chr5 31308868 31309071 -171776461 + L2 LINE L2 2539 2753 -561 250 406 23 33 chr5 31309173 31309387 -171776145 + L2 LINE L2 2852 3063 -209 790 292 13 45 chr5 31310479 31310787 -171774745 - HAL1 LINE L1 -2209 298 1 861 260 15 5 chr5 31310817 31311021 -171774511 - MER58A DNA MER1_type -3 221 16 239 176 0 15 chr5 31311138 31311206 -171774326 + CT-rich Low_complexity Low_complexity 2 68 0 189 94 0 0 chr5 31311206 31311238 -171774294 + (CA)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr5 31312391 31312416 -171773116 + (T)n Simple_repeat Simple_repeat 1 25 0 513 124 47 0 chr5 31313197 31313326 -171772206 + (TA)n Simple_repeat Simple_repeat 1 135 0 1750 156 0 14 chr5 31313455 31313750 -171771782 + AluSx SINE Alu 6 296 -16 1688 144 101 23 chr5 31314016 31314364 -171771168 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 31314654 31314676 -171770856 + AT_rich Low_complexity Low_complexity 1 22 0 547 266 14 50 chr5 31314774 31314996 -171770536 - MER20 DNA MER1_type -1 218 5 21 0 0 0 chr5 31315325 31315346 -171770186 + AT_rich Low_complexity Low_complexity 1 21 0 205 340 26 85 chr5 31318042 31318195 -171767337 - MER5B DNA MER1_type -23 155 12 1131 288 78 17 chr5 31319318 31319794 -171765738 - L1ME1 LINE L1 -15 6151 5647 300 348 77 25 chr5 31320565 31320927 -171764605 - L2 LINE L2 -974 2340 1960 257 222 278 11 chr5 31320973 31321063 -171764469 + MER34 LTR ERV1 9 122 -420 * 1362 261 68 14 chr5 31321040 31321465 -171764067 + MER39 LTR ERV1 260 707 0 646 233 39 28 chr5 31321791 31321971 -171763561 + MER5A DNA MER1_type 3 184 -5 24 32 0 0 chr5 31324161 31324192 -171761340 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr5 31324544 31324567 -171760965 + AT_rich Low_complexity Low_complexity 1 23 0 249 267 27 0 chr5 31324647 31324722 -171760810 + (TA)n Simple_repeat Simple_repeat 1 77 0 365 305 28 42 chr5 31325101 31325314 -171760218 + Charlie7 DNA MER1_type 312 521 -2091 * 425 271 0 0 chr5 31325311 31325429 -171760103 + Charlie7 DNA MER1_type 1722 1839 -773 263 298 153 15 chr5 31325457 31325588 -171759944 - LTR16A LTR ERVL 0 450 302 21 0 0 0 chr5 31325775 31325796 -171759736 + AT_rich Low_complexity Low_complexity 1 21 0 1915 155 0 16 chr5 31325836 31326153 -171759379 - AluSx SINE Alu 0 312 1 246 338 52 34 chr5 31326613 31326882 -171758650 + HAL1 LINE L1 45 318 -2189 875 315 52 65 chr5 31326925 31326965 -171758567 + L1MCb LINE L1 16 55 -5990 2104 78 0 0 chr5 31326965 31327234 -171758298 + AluY SINE Alu 43 311 0 875 315 52 65 chr5 31327234 31327745 -171757787 + L1MCb LINE L1 55 560 -5485 2321 265 95 40 chr5 31327832 31328527 -171757005 + L1MCb LINE L1 573 1228 -5336 2026 113 9 50 chr5 31328527 31328847 -171756685 + AluSx SINE Alu 1 307 -5 2321 265 95 40 chr5 31328847 31330722 -171754810 + L1MCb LINE L1 1228 3330 -3234 886 266 166 10 chr5 31330735 31331036 -171754496 - MSTD LTR MaLR -48 348 1 41 0 0 0 chr5 31332149 31332190 -171753342 + AT_rich Low_complexity Low_complexity 1 41 0 8406 65 3 2 chr5 31332431 31333501 -171752031 + MER11C LTR ERVK 1 1071 0 296 315 0 0 chr5 31333650 31333739 -171751793 - L1ME4a LINE L1 -70 6051 5963 827 196 17 17 chr5 31334286 31334459 -171751073 + AluSc SINE Alu 131 303 -6 961 223 109 8 chr5 31334859 31335291 -171750241 + MLT1D LTR MaLR 7 505 0 367 313 71 0 chr5 31335793 31335991 -171749541 - HAL1 LINE L1 -741 1766 1555 323 236 24 149 chr5 31336272 31336568 -171748964 - L1MEd LINE L1 -5050 1069 811 25 0 0 0 chr5 31337187 31337212 -171748320 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 31337344 31337366 -171748166 + AT_rich Low_complexity Low_complexity 1 22 0 2335 113 3 6 chr5 31339385 31339730 -171745802 - MER9 LTR ERVK 0 511 168 6378 27 0 0 chr5 31339730 31340475 -171745057 - L1P LINE L1 -1890 4256 3512 7699 20 2 0 chr5 31340480 31341580 -171743952 + L1PA2 LINE L1 5054 6155 0 1353 98 5 0 chr5 31341580 31341768 -171743764 - MER9 LTR ERVK -322 189 1 648 249 88 19 chr5 31342306 31342511 -171743021 - MIR SINE MIR -32 230 12 29 0 0 0 chr5 31343787 31343816 -171741716 + AT_rich Low_complexity Low_complexity 1 29 0 256 237 17 0 chr5 31344285 31344344 -171741188 + MIR SINE MIR 167 226 -36 1354 289 26 18 chr5 31345101 31345648 -171739884 + L1MA10 LINE L1 1563 2113 -4917 1209 128 20 15 chr5 31345651 31345855 -171739677 + THE1C LTR MaLR 171 375 0 890 252 40 29 chr5 31345855 31346183 -171739349 + L1MA10 LINE L1 4300 4633 -2473 * 3117 223 123 16 chr5 31346161 31346235 -171739297 + L1MA10 LINE L1 6180 6245 -1049 204 40 0 0 chr5 31346235 31346260 -171739272 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3117 223 123 16 chr5 31346260 31347148 -171738384 + L1MA10 LINE L1 6245 7239 -55 22 88 0 0 chr5 31347154 31347211 -171738321 + AT_rich Low_complexity Low_complexity 1 57 0 13880 213 31 10 chr5 31347506 31349960 -171735572 + L1PB1 LINE L1 6 2409 -4458 199 70 23 23 chr5 31349960 31350003 -171735529 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 13880 213 31 10 chr5 31350003 31352625 -171732907 + L1PB1 LINE L1 2409 5480 -1387 246 32 0 0 chr5 31352625 31352656 -171732876 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 13880 213 31 10 chr5 31352656 31353597 -171731935 + L1PB1 LINE L1 5480 6401 -466 1733 139 89 13 chr5 31353641 31353957 -171731575 + L1PB1 LINE L1 6528 6867 0 254 381 13 13 chr5 31354215 31354370 -171731162 + MLT1J LTR MaLR 3 157 -354 286 216 45 82 chr5 31354493 31354627 -171730905 + MLT1J LTR MaLR 329 457 -54 1969 137 39 41 chr5 31354757 31355083 -171730449 - L1MA5A LINE L1 -3 6294 5968 2266 88 7 0 chr5 31355083 31355379 -171730153 - AluSp SINE Alu -13 300 3 1969 137 39 41 chr5 31355379 31355467 -171730065 - L1MA5A LINE L1 -329 5968 5881 24 32 0 0 chr5 31356061 31356092 -171729440 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 31356770 31356806 -171728726 + AT_rich Low_complexity Low_complexity 1 36 0 1530 198 21 43 chr5 31357141 31357514 -171728018 + MLT1A1 LTR MaLR 1 365 0 193 320 13 13 chr5 31357811 31357886 -171727646 + L2 LINE L2 3223 3297 -16 4603 221 64 21 chr5 31360443 31361780 -171723752 + L1MA9 LINE L1 3429 4822 -1324 1647 165 58 16 chr5 31361797 31362106 -171723426 + THE1C LTR MaLR 54 375 0 9230 130 40 38 chr5 31362106 31363680 -171721852 + THE1C-int LTR MaLR 1 1577 -3 1852 159 61 19 chr5 31363683 31364042 -171721490 + THE1C LTR MaLR 1 374 -1 3699 208 23 45 chr5 31364042 31365529 -171720003 + L1MA9 LINE L1 4816 6272 -40 22 0 0 0 chr5 31365529 31365551 -171719981 + AT_rich Low_complexity Low_complexity 1 22 0 2992 167 0 34 chr5 31365838 31366365 -171719167 - HSMAR2 DNA Mariner -395 907 399 1478 228 3 10 chr5 31366366 31366664 -171718868 + AluJb SINE Alu 17 312 0 719 104 9 0 chr5 31366672 31366787 -171718745 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1611 162 94 0 chr5 31366791 31367119 -171718413 - HSMAR2 DNA Mariner -910 392 34 3989 192 108 24 chr5 31368896 31370383 -171715149 + MER52A LTR ERV1 1 1755 0 2107 110 7 16 chr5 31371012 31371322 -171714210 + AluSq SINE Alu 1 307 -6 191 176 27 27 chr5 31371747 31371821 -171713711 + GA-rich Low_complexity Low_complexity 2 75 0 438 231 0 0 chr5 31372038 31372116 -171713416 + AluJ/FLAM SINE Alu 1 78 -234 458 259 181 0 chr5 31373217 31373383 -171712149 + MIR SINE MIR 67 262 0 799 263 86 97 chr5 31374229 31374822 -171710710 + MER49 LTR ERV1 10 733 -110 2030 132 48 28 chr5 31374822 31375177 -171710355 - THE1B LTR MaLR -2 362 1 799 263 86 97 chr5 31375177 31375286 -171710246 + MER49 LTR ERV1 733 842 -1 1118 214 84 72 chr5 31375725 31376224 -171709308 - MLT1D LTR MaLR 0 505 1 23 33 0 0 chr5 31376814 31376844 -171708688 + AT_rich Low_complexity Low_complexity 1 30 0 465 304 75 40 chr5 31376936 31377137 -171708395 - MIR SINE MIR -21 241 34 21 0 0 0 chr5 31377266 31377287 -171708245 + AT_rich Low_complexity Low_complexity 1 21 0 1071 294 65 18 chr5 31377585 31377922 -171707610 - MLT1E1 LTR MaLR -5 649 297 470 223 23 54 chr5 31378009 31378139 -171707393 - MLT1E1 LTR MaLR -528 126 1 1984 165 27 0 chr5 31378646 31378974 -171706558 + MER1B DNA MER1_type 1 337 0 298 248 113 43 chr5 31380315 31380456 -171705076 - MLT1H1 LTR MaLR 0 555 428 1006 257 143 55 chr5 31380631 31381250 -171704282 - L1M4 LINE L1 -1163 4983 4420 2149 109 3 0 chr5 31381250 31381543 -171703989 + AluSx SINE Alu 1 294 -18 1006 257 143 55 chr5 31381543 31381965 -171703567 - L1M4 LINE L1 -1726 4420 3850 267 277 34 14 chr5 31382272 31382420 -171703112 - L1M4 LINE L1 -3170 2976 2826 2623 144 33 7 chr5 31382460 31382911 -171702621 - L1MA3 LINE L1 -416 5889 5427 2328 118 3 26 chr5 31382910 31383290 -171702242 + L1MA3 LINE L1 5890 6260 -45 * 5998 92 10 12 chr5 31383290 31383663 -171701869 + L1PA8A LINE L1 4986 5358 -773 1862 80 108 31 chr5 31383663 31383951 -171701581 + AluY SINE Alu 1 310 -1 5998 92 10 12 chr5 31383951 31384719 -171700813 + L1PA8A LINE L1 5358 6128 -3 1212 194 84 35 chr5 31384742 31385026 -171700506 - AluJo SINE Alu -2 300 3 245 87 0 0 chr5 31385033 31385079 -171700453 + L1MA2 LINE L1 6259 6304 0 385 308 28 9 chr5 31385122 31385336 -171700196 - L1M4 LINE L1 -3332 2814 2597 3057 219 85 8 chr5 31385342 31386164 -171699368 - L1MC3 LINE L1 0 7785 6901 256 158 12 158 chr5 31386266 31386348 -171699184 - L1MC3 LINE L1 -954 6831 6762 946 241 25 59 chr5 31386356 31386676 -171698856 - L1MC3 LINE L1 -1174 6611 6303 * 1168 222 59 9 chr5 31386670 31386990 -171698542 - L1MC2 LINE L1 -350 5928 5593 1165 113 0 6 chr5 31386992 31387169 -171698363 - L1PA13 LINE L1 -3 6160 5985 3443 121 27 5 chr5 31387173 31387822 -171697710 - L1PA13 LINE L1 -356 5812 5151 2551 185 26 0 chr5 31387820 31387879 -171697653 + L1P LINE L1 4638 4694 -1452 * 347 0 0 23 chr5 31387879 31387923 -171697609 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2551 185 26 0 chr5 31387923 31388366 -171697166 + L1P LINE L1 4694 5153 -993 808 249 32 18 chr5 31388363 31388580 -171696952 - L1MC2 LINE L1 -2116 5603 5384 * 861 294 97 32 chr5 31388671 31390275 -171695257 - L1MC2 LINE L1 -3647 2433 720 9214 136 39 5 chr5 31390827 31392253 -171693279 - HUERS-P3 LTR ERV1 -3248 5671 4197 868 146 7 0 chr5 31392246 31392383 -171693149 + HUERS-P3 LTR ERV1 2372 2509 -6410 * 3290 142 20 2 chr5 31392383 31392940 -171692592 + L1PA13 LINE L1 5595 6161 -2 422 147 18 73 chr5 31392942 31393051 -171692481 + L1MB1 LINE L1 6044 6146 -22 363 96 0 0 chr5 31393062 31393114 -171692418 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 30 0 0 0 chr5 31393643 31393673 -171691859 + AT_rich Low_complexity Low_complexity 1 30 0 191 86 0 29 chr5 31393816 31393851 -171691681 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1467 152 6 107 chr5 31394292 31394620 -171690912 - AluSx SINE Alu -7 295 1 1924 160 36 30 chr5 31394750 31395112 -171690420 + THE1B LTR MaLR 1 364 0 40 0 0 0 chr5 31395188 31395228 -171690304 + AT_rich Low_complexity Low_complexity 1 40 0 270 319 43 58 chr5 31396245 31396433 -171689099 + MLT1I LTR MaLR 104 288 -121 1347 230 114 5 chr5 31396496 31396865 -171688667 - L1 LINE L1 -1045 5101 4693 3760 176 16 7 chr5 31396873 31397604 -171687928 - L1MA6 LINE L1 0 6300 5563 22 35 0 0 chr5 31397656 31397685 -171687847 + AT_rich Low_complexity Low_complexity 1 29 0 1618 203 64 11 chr5 31397698 31398338 -171687194 + L1MA10 LINE L1 3256 3917 -3648 746 44 0 0 chr5 31399916 31400007 -171685525 + MER85 DNA T2_type 44 134 -5 676 218 57 0 chr5 31400007 31400200 -171685332 + L1MA10 LINE L1 4628 4831 -2734 4367 204 21 42 chr5 31400237 31401443 -171684089 + L1MA10 LINE L1 6526 7716 -37 1832 158 0 32 chr5 31402179 31402490 -171683042 - AluSx SINE Alu -11 301 1 185 176 54 0 chr5 31402643 31402717 -171682815 + (TA)n Simple_repeat Simple_repeat 2 79 0 24 0 0 0 chr5 31402727 31402751 -171682781 + AT_rich Low_complexity Low_complexity 1 24 0 343 335 30 12 chr5 31402833 31402997 -171682535 + MLT1I LTR MaLR 121 287 -122 230 348 43 12 chr5 31406649 31406810 -171678722 - MIR SINE MIR -46 216 51 276 91 0 0 chr5 31407808 31407852 -171677680 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 419 105 19 chr5 31408253 31408578 -171676954 + L2 LINE L2 2916 3268 -4 421 315 40 47 chr5 31409243 31409392 -171676140 - MIR SINE MIR -113 149 2 180 125 0 0 chr5 31410905 31410937 -171674595 + (CA)n Simple_repeat Simple_repeat 1 32 0 197 307 89 10 chr5 31411413 31411514 -171674018 - MIR SINE MIR -122 140 32 393 282 98 17 chr5 31412363 31412537 -171672995 + MIR SINE MIR 73 260 -2 240 59 0 0 chr5 31412940 31412974 -171672558 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 302 315 0 0 chr5 31413475 31413583 -171671949 + T-rich Low_complexity Low_complexity 1 108 0 207 215 19 28 chr5 31413635 31413742 -171671790 + T-rich Low_complexity Low_complexity 4 109 0 249 258 23 17 chr5 31413756 31413861 -171671671 + T-rich Low_complexity Low_complexity 1 105 0 2656 39 0 0 chr5 31413868 31414179 -171671353 + AluYb8 SINE Alu 3 313 -5 845 263 111 12 chr5 31415638 31416058 -171669474 - L1MC/D LINE L1 -740 5619 5161 36 0 0 0 chr5 31416096 31416132 -171669400 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 31416413 31416434 -171669098 + AT_rich Low_complexity Low_complexity 1 21 0 205 171 0 0 chr5 31417848 31417889 -171667643 + GA-rich Low_complexity Low_complexity 2 42 0 23 33 0 0 chr5 31418692 31418722 -171666810 + AT_rich Low_complexity Low_complexity 1 30 0 2617 187 104 56 chr5 31418831 31419543 -171665989 - LTR1 LTR ERV1 0 785 40 222 221 29 15 chr5 31419963 31420031 -171665501 + (TAA)n Simple_repeat Simple_repeat 1 69 0 318 359 27 22 chr5 31420075 31420259 -171665273 - MIR SINE MIR -32 230 46 394 294 84 19 chr5 31420578 31420792 -171664740 - LTR16B LTR ERVL -13 451 224 1729 147 0 70 chr5 31420803 31421138 -171664394 + AluSx SINE Alu 1 313 0 265 335 99 38 chr5 31421710 31421922 -171663610 - L2 LINE L2 -778 2536 2312 42 48 0 0 chr5 31422351 31422414 -171663118 + AT_rich Low_complexity Low_complexity 1 63 0 2298 59 3 0 chr5 31424034 31424337 -171661195 - L1PA4 LINE L1 -6 6149 5846 770 260 6 6 chr5 31424369 31424542 -171660990 + MLT1D LTR MaLR 285 457 -48 9003 102 21 3 chr5 31425011 31426442 -171659090 - L1PA7 LINE L1 -2 6152 4682 243 0 0 0 chr5 31426442 31426469 -171659063 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9003 102 21 3 chr5 31426469 31427142 -171658390 - L1PA7 LINE L1 -1472 4682 4022 6448 124 2 0 chr5 31427142 31428141 -171657391 + L1PA7 LINE L1 3024 4024 -2122 21 0 0 0 chr5 31428763 31428784 -171656748 + AT_rich Low_complexity Low_complexity 1 21 0 1860 179 36 22 chr5 31429438 31429795 -171655737 - THE1B LTR MaLR 0 364 3 235 270 40 80 chr5 31430357 31430457 -171655075 - MIR SINE MIR -108 154 59 313 295 67 24 chr5 31431074 31431284 -171654248 + L1MC4 LINE L1 103 321 -6102 227 340 69 14 chr5 31431505 31431793 -171653739 + L1MC4 LINE L1 2495 2798 -4324 322 221 149 39 chr5 31431829 31431983 -171653549 + L1MC4 LINE L1 3177 3347 -3594 956 276 10 3 chr5 31432154 31432447 -171653085 + L1MC4 LINE L1 3312 3606 -3335 319 384 8 8 chr5 31434446 31434691 -171650841 + MER70-int LTR ERVL 4431 4675 -348 1206 187 17 0 chr5 31435258 31435488 -171650044 + L1MC1 LINE L1 6088 6321 -12 290 121 99 0 chr5 31435489 31435580 -171649952 + (TATAA)n Simple_repeat Simple_repeat 1 100 0 192 77 0 0 chr5 31435594 31435620 -171649912 + (TG)n Simple_repeat Simple_repeat 1 26 0 2939 177 8 2 chr5 31435624 31436233 -171649299 - L1MA8 LINE L1 -498 5793 5182 1939 191 54 5 chr5 31436234 31436679 -171648853 + L1MA8 LINE L1 5817 6283 -8 1997 240 99 46 chr5 31436687 31437599 -171647933 + L1MC4 LINE L1 5151 6013 -1273 1633 199 0 26 chr5 31437599 31437905 -171647627 + AluJo SINE Alu 3 300 -12 1997 240 99 46 chr5 31437905 31438073 -171647459 + L1MC4 LINE L1 6013 6171 -1115 2380 215 49 9 chr5 31438073 31438111 -171647421 - MLT2B3 LTR ERVL -2 552 517 990 55 20 0 chr5 31438111 31438257 -171647275 + (TAGA)n Simple_repeat Simple_repeat 4 152 0 2380 215 49 9 chr5 31438257 31438749 -171646783 - MLT2B3 LTR ERVL -37 517 1 1997 240 99 46 chr5 31438749 31438978 -171646554 + L1MC4 LINE L1 6171 6540 -746 910 200 0 54 chr5 31438996 31439201 -171646331 + AluJo SINE Alu 95 288 -24 1500 252 106 98 chr5 31439231 31440323 -171645209 + L1MC4 LINE L1 7006 8299 -491 264 279 115 0 chr5 31440323 31440427 -171645105 + MLT1F1 LTR MaLR 5 120 -447 1500 252 106 98 chr5 31440427 31440923 -171644609 + L1MC4 LINE L1 8299 8789 -1 1045 166 18 14 chr5 31440941 31441164 -171644368 - L1M1 LINE L1 -777 5523 5300 1720 201 24 26 chr5 31441177 31441748 -171643784 + L1M2 LINE L1 4941 5512 -743 302 256 0 61 chr5 31441760 31441842 -171643690 - LTR16B LTR ERVL -292 172 96 401 343 53 46 chr5 31442405 31442839 -171642693 + ERVL LTR ERVL 2127 2563 -3201 388 324 54 10 chr5 31442898 31443102 -171642430 + ERVL LTR ERVL 2633 2845 -2640 1358 355 90 42 chr5 31443182 31443630 -171641902 + ERVL LTR ERVL 2997 3422 -2342 2344 49 0 40 chr5 31443630 31443954 -171641578 - AluY SINE Alu 0 311 1 1358 355 90 42 chr5 31443954 31444825 -171640707 + ERVL LTR ERVL 3422 4380 -1384 1999 119 0 12 chr5 31446205 31446542 -171638990 - L1PA2 LINE L1 -2 6153 5821 439 193 237 0 chr5 31546970 31547105 -171538427 + L1MC3 LINE L1 1792 1958 -4468 1504 249 34 36 chr5 31547144 31547706 -171537826 + L1MC3 LINE L1 3098 3658 -2768 1939 252 66 5 chr5 31547706 31548463 -171537069 + L1MC3 LINE L1 4576 5378 -1048 1586 157 102 0 chr5 31548547 31548860 -171536672 - MER46B DNA MER2_type -16 220 1 534 199 6 50 chr5 31548892 31549053 -171536479 + L1MC3 LINE L1 5432 5585 -841 2619 185 17 106 chr5 31549055 31549323 -171536209 - L1 LINE L1 -773 5373 5083 1955 164 92 3 chr5 31549323 31549713 -171535819 - MSTB LTR MaLR -1 425 1 2619 185 17 106 chr5 31549713 31550197 -171535335 - L1 LINE L1 -1063 5083 4688 * 3986 194 19 0 chr5 31550189 31550945 -171534587 + L1PB4 LINE L1 5379 6148 -8 * 8808 195 49 93 chr5 31550941 31553521 -171532011 + L1MC3 LINE L1 5597 8064 -1 342 303 79 31 chr5 31554104 31554460 -171531072 + L1M4 LINE L1 2154 2526 -3620 198 363 73 26 chr5 31554777 31555011 -171530521 - L2 LINE L2 -1483 1831 1587 454 174 41 33 chr5 31556182 31556303 -171529229 + Tigger6a DNA MER2_type 366 487 -596 820 210 5 16 chr5 31556308 31556494 -171529038 + Tigger6a DNA MER2_type 899 1082 -1 269 235 15 29 chr5 31556815 31556883 -171528649 + MER94 DNA DNA 1 67 -67 23 97 0 0 chr5 31556934 31557006 -171528526 + AT_rich Low_complexity Low_complexity 1 72 0 22 56 0 0 chr5 31557176 31557212 -171528320 + AT_rich Low_complexity Low_complexity 1 36 0 523 256 118 7 chr5 31557247 31557536 -171527996 + MER114 LTR ERV 7 327 -321 475 227 8 30 chr5 31557542 31557674 -171527858 + AluJb SINE Alu 3 131 -181 270 230 177 35 chr5 31559570 31559796 -171525736 + L1ME4a LINE L1 5808 6065 -56 812 277 137 25 chr5 31559937 31560410 -171525122 + MLT1H LTR MaLR 1 526 -23 1848 145 102 3 chr5 31560920 31561252 -171524280 - MER47A DNA MER2_type -1 365 1 22 0 0 0 chr5 31561591 31561613 -171523919 + AT_rich Low_complexity Low_complexity 1 22 0 1077 303 72 35 chr5 31562136 31562563 -171522969 + MLT1H LTR MaLR 3 454 -95 2013 192 6 6 chr5 31562563 31562928 -171522604 - MLT1A1 LTR MaLR 0 365 1 1077 303 72 35 chr5 31562928 31563012 -171522520 + MLT1H LTR MaLR 454 533 -16 445 244 11 68 chr5 31563534 31563710 -171521822 + MER103 DNA DNA 1 166 0 183 269 102 148 chr5 31564039 31564174 -171521358 - MIR SINE MIR -1 261 138 727 215 0 0 chr5 31564174 31564304 -171521228 + FLAM_A SINE Alu 1 130 -3 183 269 102 148 chr5 31564304 31564384 -171521148 - MIR SINE MIR -124 138 56 449 252 29 14 chr5 31564952 31565091 -171520441 - L1MA10 LINE L1 -3 6331 6191 2158 147 44 49 chr5 31565091 31565519 -171520013 - MSTB LTR MaLR 0 426 1 8422 173 47 31 chr5 31565519 31565852 -171519680 - MSTB-int LTR MaLR 0 1651 1325 10409 40 1 1 chr5 31565852 31567894 -171517638 - L1PA4 LINE L1 0 6155 4112 8422 173 47 31 chr5 31567894 31569181 -171516351 - MSTB-int LTR MaLR -326 1325 5 1934 110 0 0 chr5 31569198 31569453 -171516079 - AluY SINE Alu -3 308 54 2441 176 7 16 chr5 31569454 31569879 -171515653 - MSTB LTR MaLR -5 421 1 731 214 35 12 chr5 31569961 31569994 -171515538 - L1ME1 LINE L1 -239 5927 5895 3571 194 66 3 chr5 31569994 31570151 -171515381 - L1MA3 LINE L1 -406 5899 5753 2006 127 96 8 chr5 31570151 31570537 -171514995 - L1MA3 LINE L1 0 6305 5886 3571 194 66 3 chr5 31570537 31571638 -171513894 - L1MA3 LINE L1 -552 5753 4569 329 134 39 79 chr5 31571643 31571710 -171513822 + THE1C LTR MaLR 1 51 -377 4527 111 27 31 chr5 31571710 31572722 -171512810 + MER11A LTR ERVK 1 1265 -1 1510 163 34 37 chr5 31572723 31573049 -171512483 + THE1C LTR MaLR 51 375 0 4381 188 36 8 chr5 31573049 31573975 -171511557 - L1MA3 LINE L1 -1581 4565 3614 307 212 114 0 chr5 31574063 31574182 -171511350 - L1ME LINE L1 -266 5855 5715 3099 42 3 0 chr5 31574330 31574711 -171510821 - L1PA4 LINE L1 0 6155 5774 1833 140 27 71 chr5 31574714 31575079 -171510453 - THE1C LTR MaLR -26 349 1 8973 144 32 41 chr5 31575079 31576673 -171508859 - THE1C-int LTR MaLR 0 1580 1 2007 157 10 63 chr5 31576673 31577069 -171508463 - THE1C LTR MaLR 0 375 1 1401 236 55 18 chr5 31577069 31577184 -171508348 - L1MA3 LINE L1 -2528 3618 3509 2036 158 44 3 chr5 31577184 31577544 -171507988 - THE1C LTR MaLR 0 375 1 9550 132 32 38 chr5 31577544 31579133 -171506399 - THE1C-int LTR MaLR 0 1580 1 2231 150 27 3 chr5 31579133 31579499 -171506033 - THE1C LTR MaLR 0 375 1 1401 236 55 18 chr5 31579499 31579839 -171505693 - L1MA3 LINE L1 -2636 3510 3144 2724 34 0 0 chr5 31579849 31580171 -171505361 - L1PA4 LINE L1 -5 6150 5829 1356 19 0 0 chr5 31580175 31580337 -171505195 + L1P2 LINE L1 5307 5468 -687 970 272 31 4 chr5 31580335 31580596 -171504936 - L1MEc LINE L1 -6089 307 40 * 228 274 14 27 chr5 31580945 31581018 -171504514 + L2 LINE L2 3224 3295 -18 597 117 11 0 chr5 31581310 31581404 -171504128 - L1PA7 LINE L1 -3 6151 6057 606 108 0 0 chr5 31581404 31581490 -171504042 + L1PA7 LINE L1 5978 6066 -88 263 28 28 0 chr5 31581603 31581639 -171503893 + (TG)n Simple_repeat Simple_repeat 1 37 0 198 284 64 37 chr5 31581651 31581760 -171503772 - L2 LINE L2 -461 2853 2742 203 211 0 26 chr5 31582228 31582304 -171503228 + (TATATG)n Simple_repeat Simple_repeat 6 79 0 2061 52 36 62 chr5 31582747 31583054 -171502478 - AluY SINE Alu -12 299 1 21 0 0 0 chr5 31583795 31583816 -171501716 + AT_rich Low_complexity Low_complexity 1 21 0 204 118 29 0 chr5 31584078 31584112 -171501420 + (TGG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 31585170 31585193 -171500339 + AT_rich Low_complexity Low_complexity 1 23 0 2164 115 3 7 chr5 31585826 31586130 -171499402 + AluSc SINE Alu 1 303 -6 284 276 97 52 chr5 31586953 31587087 -171498445 - L1P LINE L1 -1921 4225 4086 726 283 45 0 chr5 31588208 31588385 -171497147 - MER5A DNA MER1_type 0 189 5 274 222 16 0 chr5 31588712 31588775 -171496757 + MER96 DNA MER1_type? 3 66 -109 249 363 102 3 chr5 31591058 31591342 -171494190 + L2 LINE L2 1636 1947 -1367 315 389 116 19 chr5 31591562 31592027 -171493505 + L2 LINE L2 2376 2885 -429 4957 177 48 32 chr5 31592095 31593083 -171492449 - L1MA9 LINE L1 -1 6311 5341 180 0 0 0 chr5 31593083 31593103 -171492429 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4957 177 48 32 chr5 31593103 31593242 -171492290 - L1MA9 LINE L1 -971 5341 5206 1957 164 3 0 chr5 31593242 31593552 -171491980 - AluJb SINE Alu -1 311 1 4957 177 48 32 chr5 31593552 31593655 -171491877 - L1MA9 LINE L1 -1106 5206 5052 37 0 0 0 chr5 31593818 31593855 -171491677 + AT_rich Low_complexity Low_complexity 1 37 0 234 333 205 0 chr5 31593888 31594005 -171491527 + L2 LINE L2 3117 3257 -15 21 36 0 0 chr5 31595415 31595443 -171490089 + AT_rich Low_complexity Low_complexity 1 28 0 1148 118 23 27 chr5 31595445 31595665 -171489867 - L1MA8 LINE L1 -20 6271 6053 2202 131 19 25 chr5 31596021 31596387 -171489145 - THE1B LTR MaLR 0 364 1 11625 93 13 9 chr5 31596387 31597182 -171488350 - THE1B-int LTR MaLR 0 1580 773 1987 204 64 21 chr5 31597182 31597666 -171487866 - LTR22 LTR ERVK -4 505 1 11625 93 13 9 chr5 31597666 31598443 -171487089 - THE1B-int LTR MaLR -807 773 1 2253 113 19 38 chr5 31598443 31598814 -171486718 - THE1B LTR MaLR 0 364 1 788 165 110 18 chr5 31599240 31599404 -171486128 + AluJb SINE Alu 130 308 -4 22 0 0 0 chr5 31600044 31600066 -171485466 + AT_rich Low_complexity Low_complexity 1 22 0 212 200 43 43 chr5 31600614 31600684 -171484848 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 27 29 0 0 chr5 31601350 31601384 -171484148 + AT_rich Low_complexity Low_complexity 1 34 0 280 271 200 53 chr5 31601479 31601649 -171483883 - MIR SINE MIR -8 254 60 183 301 0 55 chr5 31601795 31601868 -171483664 - MIR SINE MIR -116 146 78 497 328 107 12 chr5 31602144 31602397 -171483135 + MLT1K LTR MaLR 147 423 -165 343 99 14 42 chr5 31602588 31602659 -171482873 + (TCCC)n Simple_repeat Simple_repeat 2 70 0 1591 187 29 0 chr5 31602667 31602945 -171482587 - AluJo SINE Alu -26 286 1 1543 74 42 0 chr5 31602961 31603176 -171482356 - L1PA6 LINE L1 0 6154 5931 28 0 0 0 chr5 31603351 31603379 -171482153 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 31604018 31604069 -171481463 + AT_rich Low_complexity Low_complexity 1 51 0 228 351 82 34 chr5 31605397 31605750 -171479782 + L2 LINE L2 1817 2186 -1128 295 296 113 0 chr5 31605816 31605931 -171479601 - MIR SINE MIR -18 244 117 202 79 79 0 chr5 31605942 31606005 -171479527 + (TA)n Simple_repeat Simple_repeat 1 68 0 47 0 0 0 chr5 31606048 31606095 -171479437 + AT_rich Low_complexity Low_complexity 1 47 0 732 60 28 39 chr5 31606095 31606277 -171479255 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 2017 173 37 44 chr5 31606789 31607350 -171478182 - MLT2A2 LTR ERVL 0 554 1 2441 116 19 16 chr5 31607500 31607872 -171477660 - THE1C LTR MaLR -2 373 1 1284 256 39 22 chr5 31607980 31608343 -171477189 + MLT1A2 LTR MaLR 1 369 -5 264 267 139 0 chr5 31608662 31608763 -171476769 - MIR SINE MIR -11 251 137 466 305 100 36 chr5 31608915 31609687 -171475845 + L1MEd LINE L1 861 1732 -4578 291 363 16 8 chr5 31609724 31609848 -171475684 - MIR SINE MIR -111 151 27 286 346 33 27 chr5 31609959 31610133 -171475399 + MIR SINE MIR 19 193 -63 1865 187 22 6 chr5 31610180 31610539 -171474993 + MLT1A1 LTR MaLR 1 365 0 393 250 4 123 chr5 31611004 31611264 -171474268 - L2 LINE L2 -1 3312 3084 240 137 0 0 chr5 31611716 31611767 -171473765 - LTR66 LTR ERVL -166 444 394 186 133 0 0 chr5 31611773 31611803 -171473729 + (TA)n Simple_repeat Simple_repeat 2 31 0 1166 259 114 34 chr5 31611866 31612306 -171473226 - MLT1D LTR MaLR 0 505 31 24 0 0 0 chr5 31612796 31612820 -171472712 + AT_rich Low_complexity Low_complexity 1 24 0 1348 198 24 11 chr5 31614835 31615162 -171470370 + MER47B DNA MER2_type 1 379 -39 771 142 24 8 chr5 31615150 31615277 -171470255 + Tigger5 DNA MER2_type 2194 2322 -1 * 378 293 73 7 chr5 31615406 31615556 -171469976 + MLT1I LTR MaLR 100 259 -150 238 239 15 15 chr5 31615998 31616065 -171469467 + CT-rich Low_complexity Low_complexity 2 68 0 3188 28 3 5 chr5 31616179 31616568 -171468964 - L1PA4 LINE L1 0 6155 5768 2074 141 34 3 chr5 31617774 31618101 -171467431 + MER1B DNA MER1_type 1 337 0 646 301 69 0 chr5 31619231 31619447 -171466085 + MIR SINE MIR 1 231 -31 2460 47 0 28 chr5 31621150 31621470 -171464062 + AluY SINE Alu 1 311 0 198 0 0 0 chr5 31621582 31621604 -171463928 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 28 48 0 0 chr5 31622280 31622322 -171463210 + AT_rich Low_complexity Low_complexity 1 42 0 192 349 0 0 chr5 31622763 31622829 -171462703 - L2 LINE L2 -1066 2248 2183 480 270 80 44 chr5 31622855 31623081 -171462451 - MIR SINE MIR -17 245 12 228 100 0 0 chr5 31623790 31623830 -171461702 + (CA)n Simple_repeat Simple_repeat 2 41 0 314 341 49 0 chr5 31624011 31624134 -171461398 + MIR SINE MIR 32 160 -102 25 0 0 0 chr5 31624635 31624660 -171460872 + AT_rich Low_complexity Low_complexity 1 25 0 29 70 0 0 chr5 31625949 31626006 -171459526 + AT_rich Low_complexity Low_complexity 1 57 0 213 121 0 0 chr5 31626528 31626561 -171458971 + (T)n Simple_repeat Simple_repeat 1 33 0 2594 220 109 18 chr5 31626815 31627575 -171457957 - L1ME1 LINE L1 -7 6159 5331 22 0 0 0 chr5 31627597 31627619 -171457913 + AT_rich Low_complexity Low_complexity 1 22 0 2457 232 106 34 chr5 31627869 31628774 -171456758 - L1ME2 LINE L1 -71 6093 5091 2540 51 0 3 chr5 31628774 31629085 -171456447 + AluY SINE Alu 1 310 -1 2457 232 106 34 chr5 31629085 31629269 -171456263 - L1ME2 LINE L1 -1073 5091 4922 200 288 63 36 chr5 31631242 31631353 -171454179 + MER5A DNA MER1_type 1 114 -75 395 346 118 7 chr5 31633318 31633598 -171451934 - LTR33A LTR ERVL 0 523 213 311 244 13 0 chr5 31633856 31633934 -171451598 + MER116 DNA Mariner 2 80 0 290 346 39 15 chr5 31634073 31634203 -171451329 + L2 LINE L2 3180 3312 -1 25 31 0 0 chr5 31634272 31634304 -171451228 + AT_rich Low_complexity Low_complexity 1 32 0 1797 222 35 78 chr5 31634496 31635073 -171450459 - MLT2B3 LTR ERVL 0 554 3 301 71 71 0 chr5 31635823 31635893 -171449639 + (TA)n Simple_repeat Simple_repeat 2 76 0 2212 165 22 15 chr5 31637987 31638392 -171447140 + MER21-int LTR ERV1 3742 4149 -42 284 256 0 13 chr5 31638471 31638549 -171446983 + (TA)n Simple_repeat Simple_repeat 1 77 0 382 250 40 0 chr5 31638557 31638657 -171446875 + MER21B LTR ERV1 245 348 -515 10870 210 28 39 chr5 31638658 31642624 -171442908 + L1MB1 LINE L1 2246 6167 -1 363 260 86 60 chr5 31642653 31642968 -171442564 + L1ME4a LINE L1 5793 6115 -6 27 81 0 0 chr5 31643424 31643486 -171442046 + AT_rich Low_complexity Low_complexity 1 62 0 217 291 23 23 chr5 31644321 31644407 -171441125 - MIR SINE MIR -120 142 57 32 0 0 0 chr5 31644555 31644587 -171440945 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr5 31645204 31645237 -171440295 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr5 31645524 31645569 -171439963 + AT_rich Low_complexity Low_complexity 1 45 0 288 0 0 0 chr5 31645895 31645927 -171439605 + (TG)n Simple_repeat Simple_repeat 1 32 0 295 323 134 12 chr5 31646725 31646979 -171438553 + MARNA DNA Mariner 84 368 -218 192 250 0 0 chr5 31646991 31647035 -171438497 + L2 LINE L2 3269 3312 -1 38 61 0 30 chr5 31647170 31647269 -171438263 + AT_rich Low_complexity Low_complexity 1 96 0 231 146 0 0 chr5 31647560 31647601 -171437931 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 129 0 0 chr5 31647613 31647644 -171437888 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 0 chr5 31648154 31648182 -171437350 + AT_rich Low_complexity Low_complexity 1 28 0 543 138 46 0 chr5 31648185 31648272 -171437260 + AluSg/x SINE Alu 182 272 -40 201 39 0 0 chr5 31648273 31648299 -171437233 + (TC)n Simple_repeat Simple_repeat 2 27 0 2873 150 38 2 chr5 31648492 31648972 -171436560 + LOR1a LTR ERV1 1 497 0 263 285 100 0 chr5 31649506 31649636 -171435896 + MER103 DNA DNA 22 164 -2 27 62 0 0 chr5 31650526 31650574 -171434958 + AT_rich Low_complexity Low_complexity 1 48 0 302 262 102 97 chr5 31650613 31651055 -171434477 + HAL1 LINE L1 2062 2505 -2 519 100 0 0 chr5 31651310 31651380 -171434152 + LOR1a LTR ERV1 428 497 0 24 77 0 0 chr5 31651527 31651579 -171433953 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 31653215 31653236 -171432296 + AT_rich Low_complexity Low_complexity 1 21 0 6569 64 22 6 chr5 31653406 31654461 -171431071 - L1PA7 LINE L1 0 6154 5076 3959 90 11 4 chr5 31654464 31655021 -171430511 + L1PA7 LINE L1 4530 5090 -1056 1665 280 43 16 chr5 31655221 31655918 -171429614 - L1ME1 LINE L1 -216 5968 5254 245 369 26 55 chr5 31655910 31656292 -171429240 + L1MB2 LINE L1 417 787 -5516 * 2628 238 61 51 chr5 31656377 31657327 -171428205 + L1MB2 LINE L1 779 1636 -4729 1892 142 4 0 chr5 31657327 31657602 -171427930 + AluSx SINE Alu 1 276 -36 2628 238 61 51 chr5 31657602 31657819 -171427713 + L1MB2 LINE L1 1636 1849 -4516 252 167 25 133 chr5 31657844 31657964 -171427568 + L1MB2 LINE L1 2001 2107 -4277 * 5387 219 27 29 chr5 31657956 31659430 -171426102 + L1MB2 LINE L1 4035 5510 -897 4745 63 10 0 chr5 31659430 31660046 -171425486 + L1PA8 LINE L1 5542 6163 -9 5387 219 27 29 chr5 31660046 31660353 -171425179 + L1MB2 LINE L1 5510 5816 -591 2311 120 76 25 chr5 31660353 31660760 -171424772 + MSTA LTR MaLR 1 428 0 5387 219 27 29 chr5 31660760 31660805 -171424727 + L1MB2 LINE L1 5816 5860 -547 1935 170 18 12 chr5 31660805 31661140 -171424392 - MER1B DNA MER1_type 0 337 1 5387 219 27 29 chr5 31661140 31661476 -171424056 + L1MB2 LINE L1 5860 6199 -208 1977 130 7 7 chr5 31661476 31661784 -171423748 + AluSx SINE Alu 5 312 0 5387 219 27 29 chr5 31661784 31661983 -171423549 + L1MB2 LINE L1 6199 6397 -10 1045 255 95 19 chr5 31661993 31662468 -171423064 - L1MEc LINE L1 -1046 5169 4659 290 277 11 0 chr5 31662612 31662706 -171422826 - L1MEc LINE L1 -1783 4432 4338 480 324 36 0 chr5 31662845 31663095 -171422437 - L1MEc LINE L1 -2620 3595 3337 491 233 44 61 chr5 31663126 31663306 -171422226 - AluJo SINE Alu -23 289 113 965 266 97 19 chr5 31663311 31663796 -171421736 - L1MEc LINE L1 -2946 3269 2747 2373 124 3 0 chr5 31663799 31664163 -171421369 + L1P LINE L1 4730 5094 -1052 486 120 0 0 chr5 31664188 31664263 -171421269 + L1PA11 LINE L1 6100 6174 0 982 241 14 9 chr5 31664293 31664513 -171421019 - MLT1C LTR MaLR 0 467 247 628 289 86 84 chr5 31664515 31665024 -171420508 + MER34 LTR ERV1 3 512 -30 437 193 96 72 chr5 31665133 31665299 -171420233 - MLT1C LTR MaLR -292 175 6 2045 285 84 38 chr5 31665305 31666468 -171419064 - L1MEc LINE L1 -3479 2736 1627 5830 43 6 1 chr5 31666468 31667190 -171418342 - L1PA4 LINE L1 -3 6152 5428 2045 285 84 38 chr5 31667190 31667463 -171418069 - L1MEc LINE L1 -4588 1627 1368 1846 116 75 36 chr5 31667463 31667824 -171417708 + THE1C LTR MaLR 1 375 0 2045 285 84 38 chr5 31667824 31668598 -171416934 - L1MEc LINE L1 -4847 1368 468 723 298 49 78 chr5 31668767 31669257 -171416275 + L2 LINE L2 1304 1779 -1535 2154 121 13 52 chr5 31669257 31669645 -171415887 + MER4A LTR ERV1 1 373 -291 498 110 0 0 chr5 31669672 31669745 -171415787 + MER4A LTR ERV1 356 428 -236 1259 168 48 0 chr5 31669874 31670083 -171415449 + MER4A LTR ERV1 411 629 -35 2076 321 92 23 chr5 31670097 31671211 -171414321 + L2 LINE L2 1775 2964 -350 802 166 0 14 chr5 31671516 31671655 -171413877 - FLAM_C SINE Alu -6 137 1 25 51 0 0 chr5 31671659 31671698 -171413834 + AT_rich Low_complexity Low_complexity 1 39 0 311 250 54 71 chr5 31673269 31673381 -171412151 + MER5B DNA MER1_type 69 178 0 1999 129 19 26 chr5 31673915 31674226 -171411306 - AluSx SINE Alu -3 309 1 542 178 15 104 chr5 31676919 31677054 -171408478 + AluSq/x SINE Alu 5 127 -185 7068 53 8 0 chr5 31677062 31678164 -171407368 + L1PA6 LINE L1 5057 6164 0 2255 107 48 22 chr5 31678412 31678767 -171406765 + THE1B LTR MaLR 1 364 0 3803 138 19 7 chr5 31679081 31679698 -171405834 - MER41B LTR ERV1 -8 627 3 21 0 0 0 chr5 31679855 31679876 -171405656 + AT_rich Low_complexity Low_complexity 1 21 0 2651 155 69 42 chr5 31682174 31682753 -171402779 - LTR49 LTR ERV1 0 595 1 2387 136 29 15 chr5 31682753 31683165 -171402367 - LTR49-int LTR ERV1 0 6331 5914 2217 142 145 91 chr5 31683172 31683779 -171401753 + MER4A LTR ERV1 1 640 -24 2177 134 31 0 chr5 31683779 31684129 -171401403 + THE1B LTR MaLR 1 361 -3 1673 176 25 6 chr5 31684132 31684455 -171401077 + THE1B-int LTR MaLR 1 329 -1251 413 18 0 18 chr5 31685979 31686034 -171399498 + (TG)n Simple_repeat Simple_repeat 2 55 0 2252 217 20 40 chr5 31686050 31686603 -171398929 - MLT1E2 LTR MaLR -2 624 83 257 317 73 8 chr5 31686523 31686646 -171398886 - MLT2C1 LTR ERVL -223 174 44 * 425 244 0 12 chr5 31688026 31688108 -171397424 + Tigger3(Golem) DNA MER2_type 2 82 -2947 1737 160 20 3 chr5 31688127 31688427 -171397105 + Tigger3(Golem) DNA MER2_type 2725 3029 0 31 0 0 0 chr5 31689240 31689271 -171396261 + AT_rich Low_complexity Low_complexity 1 31 0 205 169 15 31 chr5 31689335 31689400 -171396132 + (TAA)n Simple_repeat Simple_repeat 1 64 0 228 67 0 0 chr5 31689693 31689723 -171395809 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 232 204 124 73 chr5 31689737 31689874 -171395658 - L1MC5 LINE L1 -31 7930 7787 201 307 80 0 chr5 31690363 31690438 -171395094 - L2 LINE L2 -1 3271 3191 185 285 95 51 chr5 31692063 31692200 -171393332 + MIR SINE MIR 120 262 0 312 364 48 11 chr5 31693214 31693401 -171392131 + L1MC4 LINE L1 6615 6808 -1234 300 270 60 10 chr5 31693490 31693590 -171391942 + MIR SINE MIR 106 210 -52 336 175 52 41 chr5 31694386 31694483 -171391049 + MER103 DNA DNA 53 150 -16 245 276 16 0 chr5 31695566 31695635 -171389897 - MIR SINE MIR -68 140 70 239 93 0 23 chr5 31695970 31696013 -171389519 - L1ME3 LINE L1 -2 6160 6119 320 316 23 0 chr5 31696060 31696193 -171389339 - L1MC4 LINE L1 -142 7900 7765 834 75 0 0 chr5 31696513 31696619 -171388913 + AluY SINE Alu 1 106 -205 25 31 0 0 chr5 31697009 31697041 -171388491 + AT_rich Low_complexity Low_complexity 1 32 0 4411 180 22 55 chr5 31697041 31697207 -171388325 - L1MB5 LINE L1 -8 6166 5996 1759 187 16 27 chr5 31697207 31697576 -171387956 - MLT1A1 LTR MaLR 0 365 1 4411 180 22 55 chr5 31697576 31698659 -171386873 - L1MB5 LINE L1 -178 5996 4960 2301 62 7 0 chr5 31699185 31699498 -171386034 + AluY SINE Alu 1 311 0 2392 51 0 29 chr5 31699745 31700061 -171385471 + AluY SINE Alu 1 307 -4 1941 127 29 23 chr5 31701340 31701648 -171383884 - AluSq SINE Alu -3 310 1 366 204 11 34 chr5 31701691 31701779 -171383753 + MER81 DNA DNA 29 114 0 757 296 113 44 chr5 31701781 31702234 -171383298 - L1MC4 LINE L1 -259 7783 7300 1546 170 125 9 chr5 31702241 31702576 -171382956 - THE1C LTR MaLR -1 374 1 5032 128 26 22 chr5 31702576 31703390 -171382142 - THE1C-int LTR MaLR 0 1580 764 300 53 0 0 chr5 31703390 31703428 -171382104 - MSTA LTR MaLR -390 38 1 560 310 41 0 chr5 31703428 31703670 -171381862 - L1MC4 LINE L1 -755 7287 7036 1889 145 0 7 chr5 31703687 31703963 -171381569 - AluSx SINE Alu -9 303 30 786 234 9 50 chr5 31703963 31704176 -171381356 + AluJo SINE Alu 96 299 -13 871 218 154 4 chr5 31704180 31704446 -171381086 - L1MC4 LINE L1 -1278 6764 6459 631 282 29 0 chr5 31707314 31707488 -171378044 - MIR SINE MIR -2 260 82 5076 214 49 16 chr5 31707588 31709079 -171376453 + L1PA15-16 LINE L1 2762 4304 -2545 187 277 102 66 chr5 31709829 31709966 -171375566 + L2 LINE L2 3168 3309 -4 401 148 12 25 chr5 31710448 31710529 -171375003 + MER5B DNA MER1_type 99 178 0 245 201 54 0 chr5 31711232 31711314 -171374218 + L1MC4 LINE L1 7419 7494 -314 198 71 0 0 chr5 31711320 31711348 -171374184 + (CA)n Simple_repeat Simple_repeat 1 28 0 360 240 185 24 chr5 31711361 31711671 -171373861 + L1MC5 LINE L1 7654 8001 -41 197 211 70 0 chr5 31713303 31713360 -171372172 + MIR SINE MIR 104 164 -98 185 339 0 15 chr5 31713486 31713551 -171371981 + MIR SINE MIR 159 222 -40 2303 228 10 15 chr5 31713733 31714254 -171371278 + L1ME1 LINE L1 5600 6117 -49 6336 169 28 7 chr5 31714365 31716206 -171369326 - L1PBa LINE L1 -4440 1764 1 311 361 128 26 chr5 31716448 31716839 -171368693 + L2 LINE L2 2310 2740 -574 700 171 28 130 chr5 31716885 31716930 -171368602 + MLT1A1 LTR MaLR 1 49 -316 2148 131 0 0 chr5 31716930 31717227 -171368305 - AluSx SINE Alu -15 297 1 700 171 28 130 chr5 31717227 31717397 -171368135 + MLT1A1 LTR MaLR 49 194 -171 399 337 67 13 chr5 31717782 31717982 -171367550 - MIR SINE MIR -10 252 40 500 264 0 8 chr5 31718352 31718477 -171367055 - MIR SINE MIR 0 262 139 221 81 0 27 chr5 31718580 31718617 -171366915 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 499 263 20 40 chr5 31718916 31719068 -171366464 + MLT1J LTR MaLR 1 149 -362 347 206 0 0 chr5 31719209 31719282 -171366250 + MLT1J LTR MaLR 416 488 -23 414 385 42 26 chr5 31719292 31719597 -171365935 - L2 LINE L2 -224 3089 2782 32 75 0 0 chr5 31720157 31720224 -171365308 + AT_rich Low_complexity Low_complexity 1 67 0 29 28 0 0 chr5 31720393 31720429 -171365103 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 31720446 31720479 -171365053 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 31720665 31720686 -171364846 + AT_rich Low_complexity Low_complexity 1 21 0 290 305 23 8 chr5 31720802 31720933 -171364599 - HAL1 LINE L1 -121 2386 2254 22 35 0 0 chr5 31721272 31721301 -171364231 + AT_rich Low_complexity Low_complexity 1 29 0 559 244 126 51 chr5 31721593 31721847 -171363685 - HAL1 LINE L1 -651 1856 1584 23 33 0 0 chr5 31722248 31722278 -171363254 + AT_rich Low_complexity Low_complexity 1 30 0 2379 71 6 10 chr5 31722337 31722648 -171362884 + AluY SINE Alu 1 310 -1 883 115 8 0 chr5 31722877 31723007 -171362525 - L1MA2 LINE L1 0 6304 6174 329 318 86 13 chr5 31723184 31723335 -171362197 - L1ME3 LINE L1 -216 5946 5785 31610 30 4 2 chr5 31774207 31778877 -171306655 + L1PA2 LINE L1 1473 6153 -2 3553 208 55 10 chr5 31778882 31779850 -171305682 + L1 LINE L1 4075 5085 -1061 403 294 87 61 chr5 31779957 31780098 -171305434 + L2 LINE L2 2984 3120 -193 2733 182 2 0 chr5 31780098 31780564 -171304968 - MLT1C LTR MaLR 0 467 1 403 294 87 61 chr5 31780564 31780732 -171304800 + L2 LINE L2 3120 3301 -12 1851 168 26 3 chr5 31782554 31782894 -171302638 - MER7A DNA MER2_type 0 346 1 762 231 94 14 chr5 31783038 31783324 -171302208 + MER33 DNA MER1_type 16 324 0 2040 142 7 0 chr5 31783392 31783688 -171301844 + AluSx SINE Alu 1 298 -14 292 286 0 24 chr5 31784547 31784631 -171300901 - MIR3 SINE MIR -48 160 79 1128 263 62 27 chr5 31787431 31787879 -171297653 - LTR16B LTR ERVL 0 464 1 1959 334 68 56 chr5 31787988 31790377 -171295155 - HERVL LTR ERVL -328 5326 2601 3857 171 78 51 chr5 31790669 31791506 -171294026 - MER21A LTR ERV1 -72 859 1 1304 322 72 20 chr5 31791617 31792362 -171293170 - HERV16 LTR ERVL -3634 1362 579 1370 102 0 0 chr5 31792362 31792539 -171292993 + THE1B LTR MaLR 1 177 -187 3279 126 14 8 chr5 31792539 31793041 -171292491 + THE1B-int LTR MaLR 1076 1580 0 2587 98 3 8 chr5 31793041 31793407 -171292125 + THE1B LTR MaLR 1 364 0 318 354 49 25 chr5 31793613 31793898 -171291634 - HERV16 LTR ERVL -4656 340 49 644 330 29 13 chr5 31793944 31794250 -171291282 - LTR16B LTR ERVL 0 464 154 2052 145 0 3 chr5 31794767 31795071 -171290461 - AluSx SINE Alu -9 303 1 226 195 0 0 chr5 31796167 31796208 -171289324 - MLT2B1 LTR ERVL -8 512 472 15235 148 35 21 chr5 31796211 31798876 -171286656 + Tigger2 DNA MER2_type 11 2712 -6 1412 198 173 32 chr5 31798905 31799305 -171286227 - MLT2B1 LTR ERVL -63 457 2 830 231 0 0 chr5 31800331 31800504 -171285028 + FRAM SINE Alu 1 166 -10 2079 142 0 3 chr5 31800545 31800855 -171284677 + AluSp SINE Alu 1 309 -4 291 317 68 12 chr5 31801030 31801176 -171284356 - L2 LINE L2 0 3313 3156 198 0 0 0 chr5 31801176 31801198 -171284334 + (TG)n Simple_repeat Simple_repeat 1 22 0 291 317 68 12 chr5 31801198 31801212 -171284320 - L2 LINE L2 -157 3156 3144 1722 154 40 0 chr5 31801342 31801614 -171283918 + AluJb SINE Alu 1 283 -29 245 98 24 0 chr5 31801617 31801658 -171283874 + (TA)n Simple_repeat Simple_repeat 2 43 0 301 319 28 16 chr5 31801696 31801878 -171283654 + L1ME LINE L1 5476 5659 -462 255 236 28 14 chr5 31801912 31801984 -171283548 - Tigger5 DNA MER2_type 0 2323 2251 * 273 180 0 20 chr5 31801957 31802007 -171283525 - Tigger5 DNA MER2_type -2273 50 2 337 222 52 78 chr5 31802246 31802399 -171283133 + L1ME4a LINE L1 5970 6118 -3 24 32 0 0 chr5 31803013 31803044 -171282488 + AT_rich Low_complexity Low_complexity 1 31 0 271 265 0 51 chr5 31803114 31803212 -171282320 + L1MC4 LINE L1 6616 6708 -1334 631 333 56 5 chr5 31804352 31804568 -171280964 - MIR SINE MIR 0 262 36 640 326 60 5 chr5 31805076 31805291 -171280241 - MIR SINE MIR 0 262 36 431 312 110 21 chr5 31805519 31805756 -171279776 + MIR SINE MIR 5 262 0 30 45 0 0 chr5 31808914 31808958 -171276574 + AT_rich Low_complexity Low_complexity 1 44 0 288 0 0 0 chr5 31809626 31809658 -171275874 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 0 0 0 chr5 31809839 31809870 -171275662 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 31810224 31810248 -171275284 + AT_rich Low_complexity Low_complexity 1 24 0 1666 269 86 50 chr5 31810990 31812841 -171272691 - L1ME3A LINE L1 -5 6165 4259 795 288 65 8 chr5 31812867 31813235 -171272297 - L1ME3A LINE L1 -1952 4194 3806 29737 119 19 57 chr5 31813917 31820318 -171265214 + L1PA7 LINE L1 12 6154 0 33 94 0 0 chr5 31821028 31821124 -171264408 + AT_rich Low_complexity Low_complexity 1 96 0 21 36 0 0 chr5 31821365 31821393 -171264139 + AT_rich Low_complexity Low_complexity 1 28 0 1413 194 7 31 chr5 31821620 31821929 -171263603 + AluJo SINE Alu 1 302 0 1055 157 0 0 chr5 31822784 31822956 -171262576 + FRAM SINE Alu 1 167 -9 1529 162 57 17 chr5 31823046 31823342 -171262190 + Tigger7 DNA MER2_type 196 503 -1984 819 133 6 110 chr5 31823364 31823504 -171262028 + Tigger7 DNA MER2_type 2433 2554 -33 2026 127 3 0 chr5 31823504 31823816 -171261716 + AluSx SINE Alu 1 313 0 819 133 6 110 chr5 31823816 31823847 -171261685 + Tigger7 DNA MER2_type 2554 2587 0 182 167 28 0 chr5 31824466 31824502 -171261030 + L2 LINE L2 3269 3305 -8 194 286 0 18 chr5 31824756 31824812 -171260720 - L2 LINE L2 0 3313 3259 256 282 12 0 chr5 31825595 31825680 -171259852 + (TA)n Simple_repeat Simple_repeat 1 86 0 201 325 16 16 chr5 31825780 31825903 -171259629 + (CATA)n Simple_repeat Simple_repeat 2 124 0 208 254 17 0 chr5 31826211 31826270 -171259262 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 287 287 16 31 chr5 31826329 31826458 -171259074 + (TATG)n Simple_repeat Simple_repeat 2 128 0 1539 176 13 89 chr5 31827502 31827893 -171257639 - MLT1A1 LTR MaLR -4 361 1 790 298 133 17 chr5 31827996 31828416 -171257116 - LTR33A LTR ERVL 0 523 55 24 0 0 0 chr5 31828862 31828886 -171256646 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 31830525 31830563 -171254969 + AT_rich Low_complexity Low_complexity 1 38 0 2668 200 12 12 chr5 31831694 31832183 -171253349 - MER70B LTR ERVL 0 578 90 767 206 6 24 chr5 31832179 31832344 -171253188 - MER70A LTR ERVL -310 162 1 * 22 56 0 0 chr5 31833418 31833454 -171252078 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 31833577 31833599 -171251933 + AT_rich Low_complexity Low_complexity 1 22 0 3127 180 36 30 chr5 31833707 31834500 -171251032 - L1M2 LINE L1 -743 5403 4652 4438 156 19 25 chr5 31834500 31835355 -171250177 + L1MA7 LINE L1 5440 6289 -2 3127 180 36 30 chr5 31835355 31835366 -171250166 - L1M2 LINE L1 -1494 4652 4643 380 375 119 19 chr5 31837043 31837355 -171248177 - L2 LINE L2 -1 3271 2929 275 271 65 61 chr5 31838201 31838422 -171247110 - MLT1L LTR MaLR -216 295 83 1214 155 0 10 chr5 31838548 31838755 -171246777 - L1PB4 LINE L1 0 6156 5952 956 269 52 55 chr5 31839456 31839820 -171245712 + MLT1G1 LTR MaLR 1 363 -232 500 253 88 24 chr5 31840053 31840223 -171245309 - MIR SINE MIR -10 252 72 311 301 16 32 chr5 31840490 31840613 -171244919 - L2 LINE L2 -4 3309 3189 214 418 34 20 chr5 31840614 31840760 -171244772 + L3 LINE CR1 1428 1575 -2 1920 140 3 7 chr5 31843122 31843422 -171242110 - AluSx SINE Alu -13 299 1 201 337 102 39 chr5 31843713 31843968 -171241564 - L2 LINE L2 -35 3237 2967 289 201 4 0 chr5 31844558 31844623 -171240909 - AluJ/monomer SINE Alu -2 300 245 284 296 16 56 chr5 31844774 31844899 -171240633 + MIR SINE MIR 21 140 -122 2347 94 0 0 chr5 31844911 31845218 -171240314 + AluY SINE Alu 1 307 -4 21 36 0 0 chr5 31845615 31845643 -171239889 + AT_rich Low_complexity Low_complexity 1 28 0 228 324 89 36 chr5 31845832 31846057 -171239475 + L2 LINE L2 2659 2895 -419 484 282 13 19 chr5 31846244 31846481 -171239051 - MLT1K LTR MaLR -181 407 148 213 139 0 23 chr5 31846730 31846773 -171238759 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 188 260 0 26 chr5 31847063 31847140 -171238392 + A-rich Low_complexity Low_complexity 1 75 0 186 43 0 0 chr5 31850622 31850645 -171234887 + (CA)n Simple_repeat Simple_repeat 2 24 0 952 164 0 0 chr5 31850661 31850807 -171234725 - FRAM SINE Alu -29 147 2 693 134 67 8 chr5 31850849 31850983 -171234549 - FLAM_C SINE Alu -1 142 1 293 333 0 0 chr5 31851155 31851239 -171234293 + L2 LINE L2 3227 3310 -3 1087 305 92 10 chr5 31851262 31851741 -171233791 + LTR33 LTR ERVL 1 518 -3 42 48 0 0 chr5 31852244 31852307 -171233225 + AT_rich Low_complexity Low_complexity 1 63 0 3225 103 0 5 chr5 31853658 31854104 -171231428 - MLT2A1 LTR ERVL 0 444 1 232 363 30 6 chr5 31854112 31854280 -171231252 - L1M4 LINE L1 -3317 2829 2658 288 224 0 0 chr5 31854285 31854352 -171231180 + (CATA)n Simple_repeat Simple_repeat 2 68 0 21 0 0 0 chr5 31854430 31854451 -171231081 + AT_rich Low_complexity Low_complexity 1 21 0 5467 195 27 9 chr5 31854809 31856813 -171228719 - L1PA16 LINE L1 0 6869 4778 7481 32 5 2 chr5 31856818 31857996 -171227536 - L1PA2 LINE L1 -1 6154 4976 453 267 44 11 chr5 31858147 31858327 -171227205 - L1ME4a LINE L1 0 6121 5936 681 256 40 20 chr5 31859553 31859752 -171225780 + L2 LINE L2 3111 3313 0 247 325 0 51 chr5 31859843 31859960 -171225572 - MIR SINE MIR -62 200 90 331 386 90 5 chr5 31861688 31861877 -171223655 + MIR SINE MIR 14 218 -44 2069 125 0 3 chr5 31862059 31862347 -171223185 - AluSx SINE Alu -9 303 17 25 51 0 0 chr5 31862438 31862477 -171223055 + AT_rich Low_complexity Low_complexity 1 39 0 311 361 71 23 chr5 31862612 31862878 -171222654 - L1ME4a LINE L1 -267 5903 5625 196 345 239 7 chr5 31862884 31863026 -171222506 - MIR3 SINE MIR -8 200 26 217 303 0 30 chr5 31863171 31863237 -171222295 + MIR SINE MIR 23 86 -122 244 287 179 88 chr5 31863259 31863852 -171221680 + L2 LINE L2 2239 2885 -429 31407 39 36 2 chr5 31863953 31867913 -171217619 - L1P LINE L1 -2047 4099 5 12107 190 16 42 chr5 31867910 31871778 -171213754 - L1PA16 LINE L1 -2064 4785 961 * 216 0 0 0 chr5 31871784 31871808 -171213724 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 880 269 93 48 chr5 31872285 31872682 -171212850 - MER90 LTR ERV1 -160 415 1 237 289 125 66 chr5 31873470 31873622 -171211910 + MIR SINE MIR 54 214 -48 229 276 17 0 chr5 31875316 31875374 -171210158 - L2 LINE L2 0 3272 3214 30 45 0 0 chr5 31876333 31876377 -171209155 + AT_rich Low_complexity Low_complexity 1 44 0 217 327 0 40 chr5 31876602 31876703 -171208829 - L2 LINE L2 -333 2939 2843 9217 113 5 9 chr5 31876741 31878811 -171206721 + L1PA10 LINE L1 3900 5961 -207 1349 329 109 46 chr5 31878969 31879224 -171206308 - L2 LINE L2 -687 2627 2390 1456 177 93 35 chr5 31879224 31879569 -171205963 + MLT1A1 LTR MaLR 1 365 0 1349 329 109 46 chr5 31879569 31880538 -171204994 - L2 LINE L2 -924 2390 1325 295 286 184 51 chr5 31880604 31880859 -171204673 - MLT1J LTR MaLR -212 299 11 185 91 0 30 chr5 31880887 31880920 -171204612 + (GA)n Simple_repeat Simple_repeat 1 32 0 1394 253 107 38 chr5 31881015 31881046 -171204486 - L2 LINE L2 -275 3038 3011 1869 173 0 3 chr5 31881046 31881341 -171204191 + AluJb SINE Alu 1 294 -18 1394 253 107 38 chr5 31881341 31881945 -171203587 - L2 LINE L2 -302 3011 2304 663 300 67 0 chr5 31882046 31882256 -171203276 - MER58A DNA MER1_type 0 224 1 475 295 15 50 chr5 31882343 31882604 -171202928 - MER113 DNA MER1_type? -42 479 228 21 0 0 0 chr5 31882777 31882798 -171202734 + AT_rich Low_complexity Low_complexity 1 21 0 394 257 140 42 chr5 31883136 31883326 -171202206 + MER69 DNA AcHobo 2 2524 -2 572 283 52 82 chr5 31883526 31883855 -171201677 + L2 LINE L2 2957 3275 -38 349 203 16 0 chr5 31883887 31883951 -171201581 - L2 LINE L2 -13 3300 3236 304 302 120 106 chr5 31884094 31884369 -171201163 + L3 LINE CR1 1294 1572 -5 246 231 0 0 chr5 31884378 31884430 -171201102 - L2 LINE L2 0 3313 3262 1034 240 39 4 chr5 31885970 31886199 -171199333 - MIR SINE MIR -12 250 14 23 0 0 0 chr5 31887757 31887780 -171197752 + AT_rich Low_complexity Low_complexity 1 23 0 203 257 14 40 chr5 31890428 31890502 -171195030 - MIR SINE MIR -55 207 136 236 337 84 0 chr5 31892426 31892521 -171193011 - L2 LINE L2 -9 3304 3202 296 197 118 0 chr5 31892736 31892812 -171192720 + MER96 DNA MER1_type? 79 163 -12 23 33 0 0 chr5 31892874 31892904 -171192628 + AT_rich Low_complexity Low_complexity 1 30 0 2238 107 0 0 chr5 31893104 31893413 -171192119 + AluSq SINE Alu 4 312 -1 600 234 0 8 chr5 31893498 31893622 -171191910 + MER94 DNA DNA 12 134 0 474 276 133 41 chr5 31895473 31895842 -171189690 + MLT1J1 LTR MaLR 1 403 -43 226 254 63 0 chr5 31896075 31896138 -171189394 + HsTC2 DNA Tc2 24 90 -1808 194 0 39 0 chr5 31896150 31896176 -171189356 + (TG)n Simple_repeat Simple_repeat 1 27 0 225 0 0 0 chr5 31896176 31896201 -171189331 + (TTG)n Simple_repeat Simple_repeat 2 26 0 490 285 23 0 chr5 31898132 31898262 -171187270 - MER117 DNA MER1_type 0 197 65 262 190 121 0 chr5 31898313 31898371 -171187161 - MIR SINE MIR -187 75 11 1861 168 8 55 chr5 31899211 31899593 -171185939 + THE1B LTR MaLR 1 364 0 427 189 142 14 chr5 31901174 31901322 -171184210 + MER20 DNA MER1_type 49 215 -4 381 305 61 115 chr5 31902056 31902551 -171182981 + L2 LINE L2 2174 2641 -673 360 409 18 0 chr5 31902580 31902805 -171182727 + L2 LINE L2 2827 3055 -217 7750 21 0 0 chr5 31903547 31904638 -171180894 + L1PA2 LINE L1 5063 6155 0 1594 284 67 58 chr5 31904740 31904793 -171180739 + L1ME3A LINE L1 4964 5015 -1155 2003 119 14 14 chr5 31904793 31905088 -171180444 + AluSx SINE Alu 1 295 -17 1594 284 67 58 chr5 31905088 31906208 -171179324 + L1ME3A LINE L1 5015 6153 -17 22 0 0 0 chr5 31906213 31906235 -171179297 + AT_rich Low_complexity Low_complexity 1 22 0 346 281 168 58 chr5 31906976 31907250 -171178282 - L2 LINE L2 -15 3298 2995 410 312 115 17 chr5 31907315 31907549 -171177983 - MIR SINE MIR -3 259 3 1674 302 101 30 chr5 31907643 31907998 -171177534 - L2 LINE L2 -475 2839 2511 2439 37 40 0 chr5 31907998 31908297 -171177235 + AluY SINE Alu 1 311 0 1674 302 101 30 chr5 31908297 31908927 -171176605 - L2 LINE L2 -803 2511 1784 183 42 0 0 chr5 31909005 31909029 -171176503 + (A)n Simple_repeat Simple_repeat 1 24 0 261 264 101 54 chr5 31909260 31909389 -171176143 - L2 LINE L2 -6 3307 3173 386 219 10 0 chr5 31910162 31910258 -171175274 + L1ME LINE L1 5721 5817 -347 191 296 62 62 chr5 31913467 31913548 -171171984 - L2 LINE L2 -624 2690 2610 239 305 114 70 chr5 31913587 31913859 -171171673 - L2 LINE L2 -16 3256 2973 604 364 73 36 chr5 31913963 31914636 -171170896 - L2 LINE L2 -575 2739 2042 225 238 0 0 chr5 31916476 31916556 -171168976 + CT-rich Low_complexity Low_complexity 2 81 0 279 189 27 40 chr5 31916742 31916816 -171168716 - MLT1E LTR MaLR -79 514 442 200 301 48 78 chr5 31917119 31917222 -171168310 + MER5A DNA MER1_type 87 186 -3 237 175 18 0 chr5 31917557 31917614 -171167918 + (TA)n Simple_repeat Simple_repeat 2 59 0 474 118 0 0 chr5 31917669 31917762 -171167770 + (TAGA)n Simple_repeat Simple_repeat 4 96 0 1886 217 73 26 chr5 31917882 31918376 -171167156 + LTR40a LTR ERVL 3 519 0 284 303 45 0 chr5 31919374 31919463 -171166069 - L2 LINE L2 -3 3269 3177 1985 124 25 0 chr5 31919574 31919872 -171165660 - AluSx SINE Alu 0 305 1 467 91 26 0 chr5 31919904 31919981 -171165551 + L1PA7 LINE L1 6076 6154 0 847 236 139 78 chr5 31920218 31920497 -171165035 - MLT1A1 LTR MaLR 0 365 60 1447 170 38 60 chr5 31920497 31920844 -171164688 + MER44D DNA MER2_type 1 609 0 847 236 139 78 chr5 31920844 31920908 -171164624 - MLT1A1 LTR MaLR -305 60 1 1012 194 57 134 chr5 31921374 31921792 -171163740 + MLT1B LTR MaLR 1 386 -4 2241 119 3 0 chr5 31922180 31922492 -171163040 - AluSq SINE Alu 0 313 1 247 345 62 0 chr5 31922783 31922896 -171162636 + LTR33A LTR ERVL 71 190 -333 290 258 54 60 chr5 31923631 31923798 -171161734 + MER103 DNA DNA 1 166 0 395 202 150 58 chr5 31924040 31924213 -171161319 + L2 LINE L2 3124 3312 -1 2234 212 75 0 chr5 31925231 31925708 -171159824 - MLT2B2 LTR ERVL -2 513 1 276 91 0 0 chr5 31927129 31927173 -171158359 + (TTGTG)n Simple_repeat Simple_repeat 4 47 0 297 189 32 0 chr5 31927630 31927725 -171157807 + (TA)n Simple_repeat Simple_repeat 2 99 0 2665 107 0 0 chr5 31928582 31928946 -171156586 + THE1B LTR MaLR 1 364 0 368 294 25 0 chr5 31929120 31929239 -171156293 + MIR3 SINE MIR 85 206 -2 196 276 40 40 chr5 31929788 31929864 -171155668 + MIR SINE MIR 79 154 -108 247 269 31 13 chr5 31929933 31930025 -171155507 - MIR SINE MIR -59 149 54 351 350 101 13 chr5 31930918 31931306 -171154226 + L2 LINE L2 1612 2033 -1281 266 348 119 37 chr5 31931364 31931743 -171153789 + L2 LINE L2 2225 2634 -680 1470 204 3 40 chr5 31932273 31932596 -171152936 - AluJo SINE Alu -1 311 1 310 331 31 19 chr5 31932932 31933092 -171152440 + L2 LINE L2 2239 2400 -914 1663 158 135 14 chr5 31933258 31933606 -171151926 - MLT1B LTR MaLR 0 390 1 475 303 56 17 chr5 31933709 31934025 -171151507 + LTR67 LTR ERVL 199 556 -1 368 305 54 0 chr5 31934554 31934689 -171150843 - MIR SINE MIR -67 141 18 218 355 98 33 chr5 31934694 31934877 -171150655 + L2 LINE L2 2887 3081 -191 23 0 0 0 chr5 31935913 31935936 -171149596 + AT_rich Low_complexity Low_complexity 1 23 0 338 267 164 50 chr5 31936734 31936996 -171148536 - L2 LINE L2 -14 3299 3008 2368 100 0 0 chr5 31937322 31937632 -171147900 - AluSx SINE Alu -2 310 1 2110 116 0 29 chr5 31938212 31938523 -171147009 + AluSx SINE Alu 1 302 -10 1903 130 13 10 chr5 31939455 31939756 -171145776 - AluSx SINE Alu -10 302 1 2243 81 0 3 chr5 31940297 31940580 -171144952 - AluSc SINE Alu -27 282 1 411 56 0 0 chr5 31941901 31941955 -171143577 + (ATG)n Simple_repeat Simple_repeat 3 56 0 243 345 79 92 chr5 31943991 31944319 -171141213 - L2 LINE L2 -17 3255 2932 313 371 123 40 chr5 31944777 31945176 -171140356 - L2 LINE L2 0 3272 2841 244 324 105 0 chr5 31945200 31945305 -171140227 - MIR SINE MIR -74 134 19 30 27 0 0 chr5 31946713 31946750 -171138782 + AT_rich Low_complexity Low_complexity 1 37 0 192 231 176 22 chr5 31949648 31949739 -171135793 + MIR SINE MIR 82 186 -76 675 101 10 0 chr5 31950262 31950361 -171135171 - L1PB3 LINE L1 -3 6151 6052 708 137 57 0 chr5 31950363 31950487 -171135045 + L1P LINE L1 5227 5357 -789 637 294 101 22 chr5 31951149 31951377 -171134155 - MIR SINE MIR -2 260 15 1032 188 65 150 chr5 31952037 31952436 -171133096 - MLT1A1 LTR MaLR 0 365 1 352 333 0 0 chr5 31952623 31952719 -171132813 - L2 LINE L2 -9 3263 3168 869 297 133 29 chr5 31953332 31953716 -171131816 - LTR16B LTR ERVL -6 458 35 472 208 28 9 chr5 31954114 31954220 -171131312 + L1 LINE L1 143 250 -5891 * 2056 163 45 17 chr5 31954206 31954646 -171130886 + L1 LINE L1 4148 4603 -1607 4662 76 14 3 chr5 31954646 31955268 -171130264 + L1PA7 LINE L1 5508 6148 -6 2056 163 45 17 chr5 31955268 31955299 -171130233 + L1 LINE L1 4603 4632 -1578 25 75 0 0 chr5 31955480 31955533 -171129999 + AT_rich Low_complexity Low_complexity 1 53 0 1280 234 120 58 chr5 31956063 31956597 -171128935 + MLT1F1 LTR MaLR 1 567 0 2062 125 0 0 chr5 31956964 31957244 -171128288 - AluSg SINE Alu -30 280 1 341 292 98 119 chr5 31957334 31957941 -171127591 - L2 LINE L2 -32 3281 2702 420 146 37 0 chr5 31957941 31958023 -171127509 + L1MB4 LINE L1 6095 6179 -1 341 292 98 119 chr5 31958023 31958295 -171127237 - L2 LINE L2 -611 2702 2426 180 111 0 0 chr5 31958357 31958384 -171127148 + (GAA)n Simple_repeat Simple_repeat 2 28 0 359 278 124 83 chr5 31959336 31959507 -171126025 - MER5A DNA MER1_type 0 189 3 181 359 72 108 chr5 31959635 31959886 -171125646 + L2 LINE L2 3024 3265 -7 2284 146 35 51 chr5 31959959 31960410 -171125122 - Tigger2 DNA MER2_type -2 2716 2273 254 179 0 0 chr5 31960400 31960439 -171125093 - Tigger2 DNA MER2_type -2649 69 31 * 441 114 0 14 chr5 31960439 31960509 -171125023 - AluS SINE Alu -244 69 1 * 847 148 51 6 chr5 31960509 31960669 -171124863 - MLT1A2 LTR MaLR -207 167 1 22 35 0 0 chr5 31961004 31961033 -171124499 + AT_rich Low_complexity Low_complexity 1 29 0 261 159 0 63 chr5 31961141 31961204 -171124328 - L3 LINE CR1 -606 971 913 2091 163 29 32 chr5 31962883 31963441 -171122091 - MLT2A1 LTR ERVL 0 554 1 25 31 0 0 chr5 31963988 31964020 -171121512 + AT_rich Low_complexity Low_complexity 1 32 0 185 357 0 36 chr5 31964133 31964217 -171121315 - L2 LINE L2 -4 3268 3188 636 245 104 60 chr5 31965157 31965406 -171120126 + MIR SINE MIR 3 262 0 22 0 0 0 chr5 31965545 31965567 -171119965 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 31967215 31967264 -171118268 + AT_rich Low_complexity Low_complexity 1 49 0 1675 199 58 62 chr5 31967854 31968321 -171117211 + MLT1C LTR MaLR 1 465 -2 2807 141 4 47 chr5 31968345 31968785 -171116747 + L1MA8 LINE L1 4817 5230 -916 1347 207 117 38 chr5 31968785 31969152 -171116380 - MSTD LTR MaLR 0 396 1 2807 141 4 47 chr5 31969152 31969265 -171116267 + L1MA8 LINE L1 5230 5346 -800 3244 159 32 21 chr5 31969269 31969626 -171115906 + L1MA8 LINE L1 5441 5809 -482 189 0 0 0 chr5 31969626 31969647 -171115885 + (TA)n Simple_repeat Simple_repeat 2 22 0 3244 159 32 21 chr5 31969647 31969907 -171115625 + L1MA8 LINE L1 5809 6065 -226 1190 79 6 6 chr5 31970308 31970473 -171115059 + L1PA13 LINE L1 5988 6152 -11 1979 152 30 41 chr5 31972498 31972685 -171112847 - MLT1B LTR MaLR 0 390 203 1268 246 21 34 chr5 31972685 31973063 -171112469 - MLT1A2 LTR MaLR -1 373 1 1979 152 30 41 chr5 31973063 31973269 -171112263 - MLT1B LTR MaLR -187 203 1 322 371 11 17 chr5 31973530 31973705 -171111827 + L1MEd LINE L1 967 1140 -4979 * 540 289 51 67 chr5 31973700 31974056 -171111476 + HAL1 LINE L1 1104 1453 -1054 701 167 10 66 chr5 31974118 31974316 -171111216 - MER53 DNA DNA -1 188 2 318 318 86 15 chr5 31974458 31974656 -171110876 + L2 LINE L2 2939 3150 -163 224 174 0 22 chr5 31974689 31974735 -171110797 + L2 LINE L2 3269 3313 0 202 309 238 18 chr5 31974808 31975203 -171110329 - L2 LINE L2 -818 2496 2015 265 161 145 0 chr5 31975346 31975408 -171110124 + MLT1H LTR MaLR 479 549 0 966 172 6 6 chr5 31975509 31975672 -171109860 + FRAM SINE Alu 1 163 -13 229 342 27 76 chr5 31975779 31976109 -171109423 - L2 LINE L2 -1639 1675 1362 952 148 51 60 chr5 31976136 31976352 -171109180 - MER20 DNA MER1_type -5 214 1 235 236 0 18 chr5 31977671 31977726 -171107806 + GA-rich Low_complexity Low_complexity 1 54 0 446 305 2 0 chr5 31978367 31978493 -171107039 + MIR SINE MIR 16 143 -65 754 274 23 50 chr5 31978735 31978901 -171106631 - MIR SINE MIR 0 262 104 1876 169 0 7 chr5 31978901 31979209 -171106323 + AluJo SINE Alu 5 310 -2 754 274 23 50 chr5 31979209 31979301 -171106231 - MIR SINE MIR -158 104 11 27 0 0 0 chr5 31982154 31982181 -171103351 + AT_rich Low_complexity Low_complexity 1 27 0 1660 169 7 21 chr5 31982691 31982981 -171102551 + AluJb SINE Alu 3 288 -24 902 133 19 6 chr5 31983628 31983786 -171101746 + L1MA2 LINE L1 6144 6303 -1 198 0 0 0 chr5 31985731 31985753 -171099779 + (A)n Simple_repeat Simple_repeat 1 22 0 2089 109 13 13 chr5 31987448 31987752 -171097780 + AluSq SINE Alu 1 304 -9 1601 155 11 0 chr5 31988379 31988643 -171096889 - AluJb SINE Alu -12 300 34 30 0 0 0 chr5 31989058 31989088 -171096444 + AT_rich Low_complexity Low_complexity 1 30 0 292 220 0 0 chr5 31989669 31989719 -171095813 + L2 LINE L2 2996 3045 -227 776 226 0 0 chr5 31990125 31990271 -171095261 - AluJb SINE Alu -19 293 148 437 333 65 65 chr5 31990688 31991487 -171094045 - L2 LINE L2 0 3272 2479 237 242 204 32 chr5 31991897 31992054 -171093478 + MLT1L LTR MaLR 374 557 -58 40416 56 3 37 chr5 31992219 31998590 -171086942 + L1PA5 LINE L1 11 6154 0 2241 59 38 17 chr5 31998632 31998921 -171086611 + AluY SINE Alu 3 297 -14 273 315 26 0 chr5 31999275 31999381 -171086151 + MIR SINE MIR 35 148 -60 2592 100 39 0 chr5 31999383 31999744 -171085788 + THE1C LTR MaLR 1 375 0 1672 194 14 0 chr5 31999816 32000105 -171085427 + AluJb SINE Alu 1 293 -19 242 219 167 10 chr5 32002352 32002448 -171083084 + LTR33A LTR ERVL 396 506 -17 748 304 32 24 chr5 32003344 32003597 -171081935 - MIR SINE MIR 0 262 8 2527 158 24 2 chr5 32003749 32004166 -171081366 + MSTB LTR MaLR 1 426 0 249 57 0 0 chr5 32004441 32004476 -171081056 + (TG)n Simple_repeat Simple_repeat 1 35 0 321 316 84 19 chr5 32005910 32006125 -171079407 + L1ME4a LINE L1 5691 5919 -202 315 246 0 0 chr5 32007187 32007256 -171078276 - MIR SINE MIR -113 149 81 30 27 0 0 chr5 32009030 32009067 -171076465 + AT_rich Low_complexity Low_complexity 1 37 0 945 130 101 18 chr5 32010607 32010776 -171074756 + AluSg/x SINE Alu 128 310 0 2423 161 105 10 chr5 32010893 32011409 -171074123 - LTR49 LTR ERV1 -30 565 1 8222 131 30 11 chr5 32011505 32012893 -171072639 - LTR49-int LTR ERV1 -47 6284 4871 2544 164 45 80 chr5 32012897 32013549 -171071983 - LTR49-int LTR ERV1 -3123 3208 2580 1721 230 58 87 chr5 32013550 32014280 -171071252 - LTR49-int LTR ERV1 -3872 2459 1670 186 43 0 0 chr5 32014295 32014318 -171071214 + (TA)n Simple_repeat Simple_repeat 1 23 0 735 166 156 29 chr5 32014341 32014546 -171070986 - LTR49 LTR ERV1 -331 264 34 1156 161 0 0 chr5 32014546 32014720 -171070812 + AluJb SINE Alu 138 311 -1 282 82 0 20 chr5 32014739 32014788 -171070744 - LTR49 LTR ERV1 -547 48 1 823 288 9 0 chr5 32014923 32015149 -171070383 - MIR SINE MIR -29 233 6 2398 92 0 0 chr5 32015751 32016055 -171069477 - AluSg SINE Alu -4 306 3 463 350 17 6 chr5 32016194 32016374 -171069158 + MIR SINE MIR 13 194 -68 23 54 0 0 chr5 32018495 32018532 -171067000 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 71 43 chr5 32019415 32019555 -171065977 + MIR SINE MIR 119 262 0 200 311 26 100 chr5 32019689 32019879 -171065653 - L2 LINE L2 -1 3312 3137 2119 123 0 19 chr5 32020015 32020324 -171065208 - AluSc SINE Alu -6 303 1 194 272 12 49 chr5 32020611 32020692 -171064840 + L2 LINE L2 2900 2977 -336 2317 94 0 31 chr5 32021014 32021332 -171064200 - AluSg1 SINE Alu -1 308 1 484 158 10 10 chr5 32022880 32022981 -171062551 + (TA)n Simple_repeat Simple_repeat 2 102 0 820 204 17 69 chr5 32023443 32023674 -171061858 - MER20 DNA MER1_type 0 219 1 697 261 46 50 chr5 32024102 32024340 -171061192 + MIR SINE MIR 2 238 -24 21 0 0 0 chr5 32024724 32024745 -171060787 + AT_rich Low_complexity Low_complexity 1 21 0 183 411 9 0 chr5 32025366 32025473 -171060059 - MIR SINE MIR -108 154 47 351 130 14 14 chr5 32026393 32026462 -171059070 + MIR SINE MIR 130 198 -64 285 29 0 0 chr5 32026669 32026703 -171058829 + (A)n Simple_repeat Simple_repeat 1 34 0 223 345 131 10 chr5 32027677 32027883 -171057649 + MIR SINE MIR 32 262 0 180 314 100 29 chr5 32029181 32029321 -171056211 + L2 LINE L2 2734 2883 -431 2590 137 24 12 chr5 32029657 32030080 -171055452 - MSTA LTR MaLR 0 428 1 2247 205 70 37 chr5 32031853 32032371 -171053161 + MER34 LTR ERV1 1 535 -7 28 48 0 0 chr5 32032522 32032564 -171052968 + AT_rich Low_complexity Low_complexity 1 42 0 808 229 124 25 chr5 32032626 32032654 -171052878 - MER5C DNA MER1_type 0 324 300 2471 115 22 0 chr5 32032654 32033010 -171052522 + THE1B LTR MaLR 1 364 0 808 229 124 25 chr5 32033010 32033256 -171052276 - MER5C DNA MER1_type -24 300 23 265 222 14 28 chr5 32033490 32033562 -171051970 + MER69 DNA AcHobo 1 71 -106 360 252 87 0 chr5 32033703 32033830 -171051702 + MER69 DNA AcHobo 2382 2519 -7 1420 148 93 21 chr5 32034030 32034103 -171051429 - MER44D DNA MER2_type -1882 609 543 2391 165 19 14 chr5 32034103 32034533 -171050999 + MSTB1 LTR MaLR 1 432 0 1420 148 93 21 chr5 32034533 32034749 -171050783 - MER44D DNA MER2_type -1948 543 29 391 247 41 34 chr5 32034879 32035025 -171050507 - MER112 DNA MER1_type -78 182 36 4506 192 22 9 chr5 32035643 32038583 -171046949 - L1PB1 LINE L1 -38 6113 2976 3988 64 28 4 chr5 32039672 32040204 -171045328 - L1PA8 LINE L1 -1 6171 5627 25 0 0 0 chr5 32040692 32040717 -171044815 + AT_rich Low_complexity Low_complexity 1 25 0 538 266 47 12 chr5 32041409 32041578 -171043954 - MER5B DNA MER1_type -3 175 1 1681 139 14 185 chr5 32041781 32042343 -171043189 + MER31B LTR ERV1 1 466 0 865 83 0 45 chr5 32043951 32044084 -171041448 + MLT1B LTR MaLR 1 127 -263 426 69 46 11 chr5 32044088 32044175 -171041357 + (TTATA)n Simple_repeat Simple_repeat 3 92 0 2587 90 0 59 chr5 32044187 32044574 -171040958 + THE1B LTR MaLR 1 364 0 1067 141 120 34 chr5 32044579 32044813 -171040719 + MLT1B LTR MaLR 135 388 -2 25 0 0 0 chr5 32045023 32045048 -171040484 + AT_rich Low_complexity Low_complexity 1 25 0 389 287 67 13 chr5 32046012 32046162 -171039370 + MIR SINE MIR 104 261 -1 339 164 0 0 chr5 32046743 32046798 -171038734 - MLT1A2 LTR MaLR 0 374 320 * 609 232 32 26 chr5 32046793 32046948 -171038584 - MLT1A2 LTR MaLR -218 156 1 368 135 0 0 chr5 32047769 32047821 -171037711 - MER45C DNA AcHobo -2 951 900 346 328 80 0 chr5 32047817 32047942 -171037590 - MER45C DNA AcHobo -320 633 499 * 534 153 15 124 chr5 32048119 32048226 -171037306 - MER45C DNA AcHobo -762 191 101 1772 97 68 84 chr5 32048226 32048537 -171036995 + AluSx SINE Alu 1 306 -6 534 153 15 124 chr5 32048537 32048566 -171036966 - MER45C DNA AcHobo -852 101 70 1205 131 6 0 chr5 32048936 32049112 -171036420 - AluSq SINE Alu -8 305 129 368 342 81 35 chr5 32049301 32049611 -171035921 - HAL1 LINE L1 -917 1590 1267 2573 136 28 16 chr5 32050632 32051059 -171034473 + MSTB1 LTR MaLR 1 432 0 1844 124 25 3 chr5 32051937 32052220 -171033312 + AluSc SINE Alu 12 300 -9 212 314 32 85 chr5 32052564 32052724 -171032808 - MIR3 SINE MIR -54 154 2 2349 38 42 7 chr5 32053275 32053562 -171031970 + AluY SINE Alu 1 297 -14 24 32 0 0 chr5 32054640 32054671 -171030861 + AT_rich Low_complexity Low_complexity 1 31 0 438 291 40 27 chr5 32055264 32055412 -171030120 - MIR SINE MIR 0 262 113 295 317 14 82 chr5 32055632 32055840 -171029692 - L2 LINE L2 -523 2791 2598 703 314 108 26 chr5 32055862 32056060 -171029472 + MLT1G1 LTR MaLR 1 181 -414 1637 157 14 14 chr5 32056060 32056346 -171029186 - AluJb SINE Alu -26 286 1 703 314 108 26 chr5 32056346 32056600 -171028932 + MLT1G1 LTR MaLR 181 490 -105 234 271 0 0 chr5 32056601 32056660 -171028872 + MLT1G1 LTR MaLR 445 503 -2 28 71 0 0 chr5 32056805 32056861 -171028671 + AT_rich Low_complexity Low_complexity 1 56 0 1967 104 0 18 chr5 32057385 32057663 -171027869 + AluSg SINE Alu 27 299 -11 1335 215 47 64 chr5 32057980 32058389 -171027143 - MER39 LTR ERV1 0 707 306 2576 65 0 3 chr5 32058851 32059160 -171026372 - AluY SINE Alu -2 309 2 181 179 18 18 chr5 32059585 32059641 -171025891 + (TA)n Simple_repeat Simple_repeat 1 56 0 1731 179 65 60 chr5 32060355 32060423 -171025109 - MLT1C LTR MaLR 0 467 401 4416 110 14 50 chr5 32060423 32061140 -171024392 + LTR8 LTR ERV1 1 691 0 1731 179 65 60 chr5 32061140 32061534 -171023998 - MLT1C LTR MaLR -66 401 3 1511 227 172 10 chr5 32061546 32062039 -171023493 + L1MC3 LINE L1 7213 7785 0 184 176 137 39 chr5 32063199 32063250 -171022282 + L2 LINE L2 3187 3242 -30 10015 122 116 15 chr5 32065438 32067167 -171018365 - L1PBa LINE L1 -4327 2536 634 1161 148 10 0 chr5 32067167 32067363 -171018169 - L1PBa LINE L1 -6663 200 3 242 369 43 14 chr5 32067512 32067653 -171017879 + L2 LINE L2 2602 2746 -568 339 357 54 16 chr5 32068159 32068288 -171017244 - L2 LINE L2 0 3272 3139 1058 226 18 0 chr5 32068306 32068527 -171017005 - MIR SINE MIR -4 258 34 566 209 101 0 chr5 32068700 32068809 -171016723 - MIR SINE MIR -44 218 91 2204 105 55 19 chr5 32068809 32069171 -171016361 + THE1C LTR MaLR 1 375 0 566 209 101 0 chr5 32069171 32069200 -171016332 - MIR SINE MIR -171 91 66 181 328 108 20 chr5 32069395 32069590 -171015942 - L2 LINE L2 -481 2833 2622 323 273 142 50 chr5 32070255 32070515 -171015017 - MLT1J LTR MaLR -12 499 216 2569 50 0 0 chr5 32072642 32072944 -171012588 - AluY SINE Alu -9 302 1 194 200 169 62 chr5 32074099 32074164 -171011368 + L2 LINE L2 3207 3278 -35 362 370 59 25 chr5 32074320 32074674 -171010858 - L2 LINE L2 -411 2903 2538 681 346 67 20 chr5 32074729 32075119 -171010413 - L2 LINE L2 -84 3229 2822 815 339 97 42 chr5 32075140 32075859 -171009673 - L2 LINE L2 -926 2388 1630 22 0 0 0 chr5 32075994 32076016 -171009516 + AT_rich Low_complexity Low_complexity 1 22 0 231 114 0 0 chr5 32076081 32076116 -171009416 + (TA)n Simple_repeat Simple_repeat 1 35 0 193 283 57 0 chr5 32076756 32076809 -171008723 - L2 LINE L2 -1 3312 3257 2236 155 101 8 chr5 32077317 32077503 -171008029 + L1P4 LINE L1 5303 5470 -692 2377 55 3 19 chr5 32077503 32077813 -171007719 + AluY SINE Alu 1 305 -6 2236 155 101 8 chr5 32077813 32077971 -171007561 + L1P4 LINE L1 5470 5612 -550 1980 130 0 36 chr5 32077971 32078272 -171007260 - AluSx SINE Alu -22 290 1 2236 155 101 8 chr5 32078272 32078418 -171007114 + L1P4 LINE L1 5612 5838 -324 288 241 23 11 chr5 32078418 32078505 -171007027 + (TA)n Simple_repeat Simple_repeat 2 89 0 239 217 22 44 chr5 32078530 32078710 -171006822 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 * 245 98 24 0 chr5 32078670 32078711 -171006821 + (CA)n Simple_repeat Simple_repeat 2 43 0 478 161 19 37 chr5 32078763 32078924 -171006608 + (CATA)n Simple_repeat Simple_repeat 2 159 0 1984 153 35 11 chr5 32078928 32079294 -171006238 + L1PB4 LINE L1 5782 6156 0 9635 178 7 12 chr5 32079831 32080119 -171005413 + L1PA7 LINE L1 3228 3516 -2635 9244 92 16 0 chr5 32080119 32082182 -171003350 + L1PA7 LINE L1 4077 6154 0 9635 178 7 12 chr5 32082182 32084472 -171001060 + L1PA7 LINE L1 3516 5791 -360 315 268 21 31 chr5 32084515 32084612 -171000920 - L1MC4 LINE L1 -1333 6709 6614 2327 107 3 22 chr5 32084631 32084996 -171000536 + L1PB1 LINE L1 5777 6134 -17 569 137 81 32 chr5 32085222 32085346 -171000186 - MER53 DNA DNA -58 131 2 26 0 0 0 chr5 32086141 32086167 -170999365 + AT_rich Low_complexity Low_complexity 1 26 0 1975 181 62 2 chr5 32087660 32088096 -170997436 - L1PA16 LINE L1 -9 6157 5661 22 0 0 0 chr5 32088520 32088542 -170996990 + AT_rich Low_complexity Low_complexity 1 22 0 452 308 81 13 chr5 32090225 32090459 -170995073 - L3 LINE CR1 -2 1575 1326 230 269 19 0 chr5 32090466 32090518 -170995014 - L3 LINE CR1 -902 675 623 183 359 160 0 chr5 32090697 32090803 -170994729 - L3 LINE CR1 -1217 360 238 220 348 148 17 chr5 32091128 32091418 -170994114 + L2 LINE L2 1990 2317 -997 299 328 40 8 chr5 32091574 32091699 -170993833 + L2 LINE L2 3180 3308 -5 188 182 23 0 chr5 32096575 32096619 -170988913 + (TA)n Simple_repeat Simple_repeat 2 46 0 1677 172 50 0 chr5 32096732 32097011 -170988521 + AluJb SINE Alu 1 293 -19 2462 132 31 24 chr5 32097271 32097696 -170987836 - MSTA LTR MaLR 0 428 1 1778 146 63 33 chr5 32098902 32099266 -170986266 - THE1C LTR MaLR 0 375 1 198 288 30 15 chr5 32099401 32099467 -170986065 - L3 LINE CR1 -322 1255 1189 1683 231 49 22 chr5 32099487 32099937 -170985595 + LTR40b LTR ERVL 1 462 0 2158 163 72 15 chr5 32100274 32100678 -170984854 + MSTA LTR MaLR 2 428 0 207 100 0 0 chr5 32101199 32101229 -170984303 + (T)n Simple_repeat Simple_repeat 1 30 0 186 43 0 0 chr5 32102358 32102381 -170983151 + (TG)n Simple_repeat Simple_repeat 2 24 0 323 310 35 9 chr5 32102693 32102806 -170982726 + L2 LINE L2 3197 3312 -1 268 327 118 7 chr5 32103817 32103970 -170981562 - L3 LINE CR1 -3 1574 1405 202 303 55 46 chr5 32104051 32104160 -170981372 - MIR SINE MIR -52 210 101 1899 209 105 66 chr5 32107900 32108416 -170977116 - MLT1E LTR MaLR 0 593 58 195 238 0 0 chr5 32109630 32109672 -170975860 - L2 LINE L2 -3 3310 3269 214 330 43 43 chr5 32110715 32110809 -170974723 - L2 LINE L2 -1 3271 3178 227 360 67 13 chr5 32110816 32110966 -170974566 + L2 LINE L2 3154 3311 -2 246 271 29 0 chr5 32113302 32113372 -170972160 - MLT1K LTR MaLR -1 587 516 2110 139 0 0 chr5 32113378 32113681 -170971851 + AluSx SINE Alu 1 303 -9 455 188 0 0 chr5 32215015 32215116 -170870416 - Tigger1 DNA MER2_type -752 1666 1566 4276 153 19 88 chr5 32215116 32216493 -170869039 - pTR5 LTR ERV1 0 2606 1524 593 231 8 0 chr5 32216633 32216754 -170868778 - FLAM_A SINE Alu -11 122 1 866 203 68 4 chr5 32216812 32217049 -170868483 - HAL1 LINE L1 -726 1781 1530 1559 168 62 0 chr5 32217052 32217326 -170868206 - AluJb SINE Alu -21 291 1 382 267 144 7 chr5 32217388 32217534 -170867998 + L2 LINE L2 2481 2646 -668 1299 168 5 0 chr5 32217617 32217826 -170867706 + AluSx SINE Alu 2 211 -101 9394 96 12 13 chr5 32217929 32219386 -170866146 - L1P LINE L1 -763 5383 3928 300 250 13 13 chr5 32219611 32219687 -170865845 - MER81 DNA DNA 0 114 39 31 0 0 0 chr5 32220975 32221006 -170864526 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 32221312 32221336 -170864196 + AT_rich Low_complexity Low_complexity 1 24 0 307 280 89 36 chr5 32222090 32222258 -170863274 + MARNA DNA Mariner 229 405 -181 22 0 0 0 chr5 32222536 32222558 -170862974 + AT_rich Low_complexity Low_complexity 1 22 0 2379 158 54 2 chr5 32222639 32223044 -170862488 - MSTB LTR MaLR 0 426 1 229 268 127 0 chr5 32223417 32223488 -170862044 + MIR SINE MIR 19 98 -164 858 198 11 50 chr5 32229192 32229374 -170856158 - FAM SINE Alu 0 175 1 231 188 100 12 chr5 32229382 32229462 -170856070 - L1MC5 LINE L1 -34 7927 7841 1434 196 103 41 chr5 32229475 32229801 -170855731 - L1MC5 LINE L1 -310 7651 7276 813 212 88 5 chr5 32229801 32229994 -170855538 - MER3 DNA MER1_type 0 209 1 1434 196 103 41 chr5 32229994 32230208 -170855324 - L1MC5 LINE L1 -685 7276 7077 352 145 0 105 chr5 32230346 32230422 -170855110 - Tigger5 DNA MER2_type 0 2323 2256 243 250 18 0 chr5 32230434 32230490 -170855042 + Tigger5 DNA MER2_type 2264 2320 -3 * 405 215 0 0 chr5 32230490 32230568 -170854964 - Tigger5 DNA MER2_type -2245 78 1 1835 160 0 11 chr5 32230727 32231014 -170854518 - AluJo SINE Alu -28 284 1 2276 88 10 3 chr5 32231204 32231500 -170854032 + AluSx SINE Alu 8 305 -7 234 228 59 30 chr5 32231524 32231625 -170853907 - L1MC5 LINE L1 -1844 5964 5861 320 250 0 0 chr5 32231627 32231691 -170853841 + AluJ/FLAM SINE Alu 1 64 -238 1079 170 0 0 chr5 32231691 32231856 -170853676 + AluJo/FRAM SINE Alu 130 294 -18 390 21 0 0 chr5 32232115 32232162 -170853370 + (TG)n Simple_repeat Simple_repeat 2 48 0 612 299 51 49 chr5 32232455 32232684 -170852848 - HAL1b LINE L1 -706 642 415 2079 139 0 3 chr5 32232684 32232985 -170852547 + AluJb SINE Alu 1 300 -12 612 299 51 49 chr5 32232985 32233303 -170852229 - HAL1b LINE L1 -933 415 94 2463 73 0 0 chr5 32233665 32233966 -170851566 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 32234678 32234699 -170850833 + AT_rich Low_complexity Low_complexity 1 21 0 224 313 197 50 chr5 32234907 32235117 -170850415 + L3 LINE CR1 1120 1388 -189 1849 151 0 27 chr5 32235117 32235416 -170850116 + AluJb SINE Alu 1 291 -21 224 313 197 50 chr5 32235416 32235505 -170850027 + L3 LINE CR1 1388 1463 -114 221 384 30 0 chr5 32236479 32236578 -170848954 - MIR3 SINE MIR -50 158 57 911 226 28 19 chr5 32236600 32236812 -170848720 - MIR SINE MIR -37 225 12 2332 93 0 0 chr5 32237401 32237701 -170847831 - AluSq SINE Alu -13 300 1 5495 105 14 27 chr5 32237792 32238760 -170846772 - L1PB3 LINE L1 -4 6150 5194 1811 140 59 0 chr5 32238871 32239157 -170846375 - AluJo SINE Alu -7 305 3 2117 141 0 7 chr5 32239471 32239770 -170845762 - AluSx SINE Alu -15 297 1 4401 177 25 16 chr5 32240082 32241099 -170844433 - L1MB8 LINE L1 -1 6177 5144 608 219 0 0 chr5 32241097 32241234 -170844298 - L1MB8 LINE L1 -1461 4685 4549 * 2204 89 94 19 chr5 32241255 32241568 -170843964 - L1PA13 LINE L1 -39 6124 5780 2025 140 0 0 chr5 32241568 32241861 -170843671 - AluSx SINE Alu -19 293 1 2204 89 94 19 chr5 32241861 32241920 -170843612 - L1PA13 LINE L1 -383 5780 5727 276 55 0 73 chr5 32241924 32241979 -170843553 - FAM SINE Alu -1 178 128 3028 228 53 12 chr5 32241979 32242153 -170843379 - L1MB8 LINE L1 -1589 4557 4392 2588 61 0 3 chr5 32242153 32242464 -170843068 - AluY SINE Alu -1 310 1 3028 228 53 12 chr5 32242464 32243192 -170842340 - L1MB8 LINE L1 -1754 4392 3618 271 384 56 0 chr5 32244639 32244764 -170840768 + L2 LINE L2 3141 3272 0 1963 102 80 0 chr5 32245306 32245581 -170839951 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr5 32245675 32245696 -170839836 + AT_rich Low_complexity Low_complexity 1 21 0 193 286 114 0 chr5 32245826 32245896 -170839636 + L3 LINE CR1 1496 1573 -4 1636 164 39 4 chr5 32247204 32247485 -170838047 - AluJo SINE Alu -21 291 1 1178 125 91 159 chr5 32247599 32247983 -170837549 - MER46B DNA MER2_type -3 233 1 2171 207 62 20 chr5 32248902 32249065 -170836467 - MER44D DNA MER2_type -1913 574 419 545 118 11 0 chr5 32249065 32249158 -170836374 + L1PA15 LINE L1 6072 6165 0 2171 207 62 20 chr5 32249158 32249492 -170836040 - MER44D DNA MER2_type -2068 419 1 1589 281 82 48 chr5 32249531 32250399 -170835133 + L2 LINE L2 1841 2737 -577 197 284 28 83 chr5 32250620 32250729 -170834803 - L2 LINE L2 -213 3059 2957 468 0 0 0 chr5 32251827 32251879 -170833653 + (TG)n Simple_repeat Simple_repeat 2 53 0 2255 118 0 0 chr5 32251929 32252226 -170833306 + AluSx SINE Alu 2 298 -14 418 270 13 113 chr5 32253480 32253710 -170831822 + MIR SINE MIR 53 259 -3 2219 79 0 30 chr5 32254766 32255071 -170830461 + AluY SINE Alu 3 298 -13 2316 104 0 0 chr5 32256185 32256483 -170829049 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr5 32257228 32257251 -170828281 + (T)n Simple_repeat Simple_repeat 1 23 0 490 305 6 30 chr5 32257971 32258135 -170827397 + MIR SINE MIR 25 184 -78 646 167 25 8 chr5 32258147 32258267 -170827265 + MER90 LTR ERV1 352 473 -102 239 294 44 0 chr5 32260508 32260576 -170824956 + L2 LINE L2 3201 3271 -1 357 127 16 0 chr5 32260839 32260902 -170824630 - LTR65 LTR ERV1 -6 663 600 567 224 8 0 chr5 32261077 32261211 -170824321 - LTR65 LTR ERV1 -534 135 1 194 314 210 45 chr5 32261421 32261863 -170823669 + L2 LINE L2 2243 2757 -557 235 309 119 0 chr5 32262274 32262358 -170823174 - MIR SINE MIR -121 141 48 303 299 170 26 chr5 32262658 32262852 -170822680 - MIR SINE MIR -21 241 20 24 0 0 0 chr5 32263261 32263285 -170822247 + AT_rich Low_complexity Low_complexity 1 24 0 220 242 0 16 chr5 32264814 32264876 -170820656 + (TA)n Simple_repeat Simple_repeat 1 61 0 21 0 0 0 chr5 32264947 32264968 -170820564 + AT_rich Low_complexity Low_complexity 1 21 0 567 235 129 18 chr5 32265171 32265341 -170820191 + MER5A DNA MER1_type 1 189 0 835 244 10 0 chr5 32266076 32266269 -170819263 - MER58A DNA MER1_type -11 213 19 1622 118 6 156 chr5 32266498 32266863 -170818669 - AluJb SINE Alu -2 310 1 208 277 31 75 chr5 32267535 32267694 -170817838 - L2 LINE L2 -18 3295 3144 720 325 115 21 chr5 32269405 32270015 -170815517 + L2 LINE L2 1955 2621 -693 1566 169 69 4 chr5 32270048 32270308 -170815224 + AluJo SINE Alu 1 277 -35 423 78 0 0 chr5 32270309 32270373 -170815159 + (TC)n Simple_repeat Simple_repeat 2 65 0 248 0 31 0 chr5 32270376 32270408 -170815124 + (CA)n Simple_repeat Simple_repeat 2 34 0 212 356 0 11 chr5 32270701 32270788 -170814744 + L2 LINE L2 2622 2707 -607 599 253 59 0 chr5 32270831 32271017 -170814515 + L2 LINE L2 2057 2253 -1061 255 51 0 0 chr5 32271029 32271068 -170814464 - L1P LINE L1 -854 5300 5262 960 284 123 11 chr5 32271068 32271745 -170813787 + L2 LINE L2 2559 3311 -2 453 285 131 55 chr5 32271843 32272240 -170813292 + L2 LINE L2 2842 3268 -4 21 0 0 0 chr5 32272363 32272384 -170813148 + AT_rich Low_complexity Low_complexity 1 21 0 225 307 148 20 chr5 32273085 32273287 -170812245 - L3b LINE CR1 -87 1496 1269 745 276 39 4 chr5 32273946 32274178 -170811354 - MIR SINE MIR -3 259 20 241 289 44 22 chr5 32274707 32274797 -170810735 - MER5B DNA MER1_type -72 106 15 2094 127 0 7 chr5 32276690 32276982 -170808550 + AluJb SINE Alu 1 290 -22 37 23 0 0 chr5 32277028 32277072 -170808460 + AT_rich Low_complexity Low_complexity 1 44 0 397 237 45 6 chr5 32277187 32277370 -170808162 + L1ME1 LINE L1 5946 6181 -3 1477 178 73 14 chr5 32282107 32282393 -170803139 - AluSx SINE Alu -9 303 1 222 37 0 0 chr5 32282826 32282853 -170802679 + (A)n Simple_repeat Simple_repeat 1 27 0 2263 99 0 25 chr5 32283218 32283532 -170802000 - AluSq SINE Alu -7 306 1 356 299 57 13 chr5 32283645 32283802 -170801730 - L1MC4a LINE L1 -1904 5904 5741 324 178 99 40 chr5 32284387 32284488 -170801044 + L1ME4a LINE L1 5512 5618 -503 974 144 0 0 chr5 32284518 32284657 -170800875 + AluJo SINE Alu 120 258 -54 364 258 94 6 chr5 32284711 32284783 -170800749 + L1ME4a LINE L1 5712 5776 -345 808 232 34 73 chr5 32284783 32285016 -170800516 - MER58A DNA MER1_type 0 224 1 364 258 94 6 chr5 32285016 32285102 -170800430 + L1ME4a LINE L1 5776 5884 -237 225 143 0 0 chr5 32285189 32285231 -170800301 - LTR66 LTR ERVL -172 438 397 1638 106 68 0 chr5 32285545 32285782 -170799750 + AluSg SINE Alu 1 253 -57 239 0 32 0 chr5 32285795 32285826 -170799706 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1241 172 60 84 chr5 32285984 32286316 -170799216 - MER44D DNA MER2_type -6 603 10 38 0 0 0 chr5 32287005 32287043 -170798489 + AT_rich Low_complexity Low_complexity 1 38 0 577 211 0 38 chr5 32288128 32288261 -170797271 - L2 LINE L2 -1 3312 3185 21 0 0 0 chr5 32288420 32288441 -170797091 + AT_rich Low_complexity Low_complexity 1 21 0 2276 98 3 7 chr5 32288470 32288776 -170796756 + AluSx SINE Alu 1 305 -7 348 64 0 0 chr5 32289193 32289240 -170796292 + (CA)n Simple_repeat Simple_repeat 2 48 0 1768 108 0 0 chr5 32289384 32289616 -170795916 - AluSg/x SINE Alu -5 307 76 2138 96 72 86 chr5 32289619 32290021 -170795511 + LTR14B LTR ERVK 3 608 0 5574 54 65 9 chr5 32290021 32290765 -170794767 + HERVK14 LTR ERVK 1 785 -5160 8969 66 25 15 chr5 32290801 32291141 -170794391 + HERV17 LTR ERV1 824 1159 -7467 198 0 0 0 chr5 32291141 32291163 -170794369 + (TA)n Simple_repeat Simple_repeat 1 22 0 8969 66 25 15 chr5 32291163 32292004 -170793528 + HERV17 LTR ERV1 1159 2016 -6610 * 11196 43 5 3 chr5 32291987 32293309 -170792223 + HERV17 LTR ERV1 2430 3754 -4872 1284 20 7 0 chr5 32293288 32293436 -170792096 + HERV17 LTR ERV1 5405 5553 -3073 * 371 41 0 0 chr5 32293435 32293484 -170792048 + HERV17 LTR ERV1 433 481 -8145 * 3534 55 11 16 chr5 32293484 32294140 -170791392 + HERVK14 LTR ERVK 5038 5759 -186 276 249 0 18 chr5 32294140 32294215 -170791317 + MER41C LTR ERV1 1 61 -493 829 19 76 19 chr5 32294215 32294320 -170791212 + HERVK14 LTR ERVK 5835 5945 0 267 85 21 43 chr5 32294323 32294370 -170791162 + LTR14B LTR ERVK 1 46 -562 * 2131 115 85 24 chr5 32294358 32294733 -170790799 + LTR14B LTR ERVK 211 608 0 523 111 0 0 chr5 32294733 32294814 -170790718 - AluJ/FLAM SINE Alu -230 82 2 207 358 118 28 chr5 32295653 32295694 -170789838 - L2 LINE L2 -652 2662 2626 1412 174 112 41 chr5 32295694 32296034 -170789498 - MLT1A1 LTR MaLR -1 364 1 207 358 118 28 chr5 32296034 32296160 -170789372 - L2 LINE L2 -688 2626 2513 1149 201 9 14 chr5 32296160 32296379 -170789153 - MER20 DNA MER1_type 0 219 2 207 358 118 28 chr5 32296379 32296462 -170789070 - L2 LINE L2 -801 2513 2439 2109 111 7 3 chr5 32296462 32296750 -170788782 + AluSq SINE Alu 1 289 -24 207 358 118 28 chr5 32296750 32296888 -170788644 - L2 LINE L2 -875 2439 2237 2336 86 20 0 chr5 32297389 32297693 -170787839 + AluSp SINE Alu 1 310 -3 451 229 153 93 chr5 32297767 32298133 -170787399 + MLT1J1 LTR MaLR 58 445 -1 1281 135 0 30 chr5 32298219 32298419 -170787113 + MSTA LTR MaLR 233 426 -2 8411 147 20 120 chr5 32298419 32298985 -170786547 + MSTA-int LTR MaLR 3 624 -1027 2181 104 7 0 chr5 32298985 32299398 -170786134 - AluSq SINE Alu 0 415 1 8411 147 20 120 chr5 32299398 32300656 -170784876 + MSTA-int LTR MaLR 624 1645 -6 2141 142 67 24 chr5 32300668 32300732 -170784800 + MSTA LTR MaLR 39 99 -329 2347 157 52 0 chr5 32300732 32301139 -170784393 + MSTA LTR MaLR 1 428 0 2141 142 67 24 chr5 32301139 32301448 -170784084 + MSTA LTR MaLR 99 428 0 24 0 0 0 chr5 32301862 32301886 -170783646 + AT_rich Low_complexity Low_complexity 1 24 0 2266 95 6 22 chr5 32301951 32302268 -170783264 + AluSp SINE Alu 1 312 -1 392 178 84 63 chr5 32302593 32302784 -170782748 - L1MC5 LINE L1 -409 7552 7358 259 59 0 0 chr5 32302923 32302957 -170782575 + MLT2D LTR ERVL 1 34 -380 397 117 0 0 chr5 32302960 32303020 -170782512 + MLT1E1 LTR MaLR 595 654 0 1671 127 0 4 chr5 32303049 32303285 -170782247 + AluJb SINE Alu 52 286 -26 1864 163 0 22 chr5 32303371 32303690 -170781842 + AluJo SINE Alu 1 312 0 2067 150 0 0 chr5 32303810 32304110 -170781422 - AluJb SINE Alu -12 300 1 251 371 56 35 chr5 32304179 32304465 -170781067 + L2 LINE L2 2976 3267 -5 2358 90 0 3 chr5 32307585 32307886 -170777646 - AluY SINE Alu -11 300 1 589 145 60 0 chr5 32307889 32308006 -170777526 - MER58 DNA MER1_type -34 2386 2263 * 840 208 48 0 chr5 32308000 32308168 -170777364 - MER58 DNA MER1_type -165 176 1 207 0 0 0 chr5 32308583 32308606 -170776926 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 402 310 119 9 chr5 32309329 32309555 -170775977 + MIR SINE MIR 12 262 0 415 211 138 24 chr5 32310276 32310399 -170775133 - MIR SINE MIR -98 164 28 534 165 220 28 chr5 32311463 32311572 -170773960 - FLAM_C SINE Alu -3 130 1 2429 82 0 13 chr5 32312874 32313189 -170772343 + AluY SINE Alu 1 311 0 2341 119 0 0 chr5 32313597 32313909 -170771623 + AluSx SINE Alu 1 312 0 245 304 51 0 chr5 32314235 32314314 -170771218 + MIR SINE MIR 38 120 -142 1123 84 13 0 chr5 32316545 32316700 -170768832 - L1PA8 LINE L1 -3 6169 6013 194 321 179 0 chr5 32317260 32317366 -170768166 - L2 LINE L2 -10 3262 3138 2057 128 10 0 chr5 32317849 32318158 -170767374 - AluSq SINE Alu -18 295 1 404 289 48 18 chr5 32318437 32318603 -170766929 - LTR16B LTR ERVL -229 235 65 242 329 42 48 chr5 32318913 32319202 -170766330 - L2 LINE L2 -1096 2218 1932 1749 164 27 20 chr5 32319964 32320257 -170765275 - AluJb SINE Alu -17 295 1 1247 95 0 4 chr5 32324138 32324587 -170760945 + (CCAA)n Simple_repeat Simple_repeat 1 446 0 1085 71 32 0 chr5 32324978 32325132 -170760400 + MER41B LTR ERV1 475 633 -2 466 305 74 19 chr5 32325506 32325762 -170759770 + MLT1J LTR MaLR 224 493 -18 4166 117 6 6 chr5 32326321 32326954 -170758578 + MER41B LTR ERV1 1 633 -2 226 293 94 38 chr5 32327732 32328019 -170757513 + HAL1 LINE L1 2169 2471 -36 339 25 0 0 chr5 32328457 32328497 -170757035 + (CA)n Simple_repeat Simple_repeat 2 41 0 2079 134 13 0 chr5 32329610 32329915 -170755617 + AluSx SINE Alu 3 311 -1 343 169 0 24 chr5 32329915 32329998 -170755534 + GA-rich Low_complexity Low_complexity 1 81 0 1605 197 153 22 chr5 32330703 32331149 -170754383 + MLT1D LTR MaLR 2 505 0 2142 146 0 15 chr5 32331258 32331600 -170753932 + MER1B DNA MER1_type 1 337 0 1341 227 71 17 chr5 32331890 32332243 -170753289 + MLT1A2 LTR MaLR 3 374 0 2554 185 25 70 chr5 32332427 32332699 -170752833 + MLT1E3 LTR MaLR 1 284 -340 1333 211 21 18 chr5 32332699 32332979 -170752553 + AluJo SINE Alu 1 281 -31 222 37 0 0 chr5 32332983 32333010 -170752522 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2554 185 25 70 chr5 32333010 32333386 -170752146 + MLT1E3 LTR MaLR 287 624 0 292 310 61 37 chr5 32334123 32334368 -170751164 - MLT1K LTR MaLR -19 569 319 289 309 78 54 chr5 32335052 32335256 -170750276 - L2 LINE L2 -557 2757 2549 187 229 83 64 chr5 32336487 32336596 -170748936 - L2 LINE L2 -911 2403 2293 1874 168 33 41 chr5 32337019 32337241 -170748291 - MLT1B LTR MaLR -1 389 170 2431 81 10 0 chr5 32337241 32337549 -170747983 - AluSp SINE Alu -2 311 1 1874 168 33 41 chr5 32337549 32337718 -170747814 - MLT1B LTR MaLR -220 170 1 1833 184 7 0 chr5 32338172 32338482 -170747050 - AluJo SINE Alu 0 312 1 2217 138 0 0 chr5 32338488 32338792 -170746740 - AluSx SINE Alu -8 304 1 529 293 66 0 chr5 32339838 32340005 -170745527 + MIR SINE MIR 20 197 -65 244 138 35 17 chr5 32340260 32340318 -170745214 + (TA)n Simple_repeat Simple_repeat 1 59 0 616 226 0 15 chr5 32341074 32341211 -170744321 - MIR SINE MIR 0 262 128 1234 148 229 4 chr5 32341603 32341847 -170743685 + AluSq SINE Alu 1 299 -4 337 276 0 0 chr5 32342213 32342289 -170743243 + L2 LINE L2 3238 3313 0 995 262 53 42 chr5 32342298 32342730 -170742802 + HAL1b LINE L1 367 803 -545 779 316 128 44 chr5 32343675 32344649 -170740883 - L2 LINE L2 -1 3271 2222 1845 207 80 4 chr5 32345545 32345995 -170739537 + MLT1E2 LTR MaLR 143 626 0 181 372 145 23 chr5 32346130 32346474 -170739058 + L2 LINE L2 2425 2810 -504 183 308 77 44 chr5 32346568 32346659 -170738873 + L2 LINE L2 2950 3043 -229 1938 162 0 3 chr5 32347870 32348167 -170737365 + AluJb SINE Alu 1 296 -16 27 0 0 0 chr5 32348345 32348372 -170737160 + AT_rich Low_complexity Low_complexity 1 27 0 670 136 0 0 chr5 32349158 32349261 -170736271 - FLAM_C SINE Alu -32 111 9 2261 117 10 0 chr5 32349277 32349586 -170735946 - AluSx SINE Alu 0 312 1 199 225 0 0 chr5 32350208 32350248 -170735284 - L2 LINE L2 0 3313 3274 27 0 0 0 chr5 32350480 32350507 -170735025 + AT_rich Low_complexity Low_complexity 1 27 0 1103 53 0 0 chr5 32350507 32350639 -170734893 - AluY SINE Alu -179 132 1 233 282 104 43 chr5 32351208 32351371 -170734161 + L2 LINE L2 1211 1383 -1931 880 336 78 15 chr5 32351451 32352038 -170733494 + L2 LINE L2 1827 2450 -864 1480 288 76 48 chr5 32352195 32352941 -170732591 + HAL1 LINE L1 146 912 -1595 720 241 32 66 chr5 32353104 32353351 -170732181 + HAL1 LINE L1 1953 2184 -323 243 79 0 0 chr5 32353351 32353389 -170732143 + (TG)n Simple_repeat Simple_repeat 2 39 0 720 241 32 66 chr5 32353389 32353518 -170732014 + HAL1 LINE L1 2184 2316 -191 272 250 14 0 chr5 32353521 32353593 -170731939 + MER116 DNA Mariner 1 73 -7 356 267 124 0 chr5 32353594 32353755 -170731777 + HAL1 LINE L1 2326 2506 -1 46 62 0 0 chr5 32354379 32354460 -170731072 + AT_rich Low_complexity Low_complexity 1 81 0 2467 99 14 11 chr5 32354719 32355084 -170730448 - THE1C LTR MaLR -9 366 1 307 265 41 10 chr5 32357152 32357250 -170728282 + L2 LINE L2 3169 3269 -3 278 252 156 15 chr5 32357510 32357645 -170727887 + MER117 DNA MER1_type 3 156 -41 247 127 42 84 chr5 32357853 32357924 -170727608 + MLT1J1 LTR MaLR 50 117 -329 276 30 0 0 chr5 32358430 32358463 -170727069 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 207 69 0 0 chr5 32359095 32359124 -170726408 + (T)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr5 32359208 32359228 -170726304 + (T)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr5 32360477 32360498 -170725034 + (A)n Simple_repeat Simple_repeat 1 21 0 2526 54 0 10 chr5 32361680 32361993 -170723539 + AluY SINE Alu 1 310 -1 345 47 0 0 chr5 32363317 32363360 -170722172 + (TG)n Simple_repeat Simple_repeat 1 43 0 549 269 12 25 chr5 32367058 32367218 -170718314 - MIR SINE MIR 0 262 105 306 246 15 0 chr5 32367432 32367497 -170718035 - L2 LINE L2 0 3313 3248 2263 117 0 3 chr5 32367673 32367972 -170717560 - AluSx SINE Alu -14 298 1 220 262 106 71 chr5 32368009 32368150 -170717382 - L2 LINE L2 -543 2771 2626 241 263 121 10 chr5 32368708 32368807 -170716725 + MIR SINE MIR 97 206 -56 340 362 73 13 chr5 32369048 32369280 -170716252 + MIR SINE MIR 3 248 -14 195 129 0 0 chr5 32371151 32371182 -170714350 + (CATATA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 32371444 32371468 -170714064 + AT_rich Low_complexity Low_complexity 1 24 0 826 143 66 55 chr5 32371524 32371706 -170713826 - MER20 DNA MER1_type -34 185 2 690 335 23 5 chr5 32372929 32373147 -170712385 - MIR SINE MIR -18 244 23 900 267 105 28 chr5 32373348 32373711 -170711821 - L2 LINE L2 -5 3308 2918 22 0 0 0 chr5 32374002 32374024 -170711508 + AT_rich Low_complexity Low_complexity 1 22 0 1486 11 6 11 chr5 32374405 32374583 -170710949 + L1PA5 LINE L1 5978 6154 0 288 0 0 0 chr5 32375760 32375792 -170709740 + (TG)n Simple_repeat Simple_repeat 1 32 0 251 291 52 112 chr5 32375869 32376014 -170709518 - L2 LINE L2 -420 2894 2742 183 42 0 0 chr5 32376014 32376038 -170709494 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 251 291 52 112 chr5 32376038 32376056 -170709476 - L2 LINE L2 -572 2742 2724 1713 155 30 0 chr5 32376056 32376321 -170709211 - AluJb SINE Alu -39 273 1 251 291 52 112 chr5 32376321 32376407 -170709125 - L2 LINE L2 -590 2724 2659 199 322 63 21 chr5 32376408 32376551 -170708981 - L2 LINE L2 -894 2420 2272 182 200 0 0 chr5 32376662 32376697 -170708835 + L2 LINE L2 3264 3298 -15 1339 154 157 27 chr5 32376845 32377177 -170708355 + THE1C LTR MaLR 1 375 0 9111 145 10 24 chr5 32377179 32378780 -170706752 + MSTA-int LTR MaLR 3 1580 0 1572 141 258 3 chr5 32378780 32379121 -170706411 + MSTA LTR MaLR 1 428 0 1055 267 59 34 chr5 32381465 32382066 -170703466 + L2 LINE L2 2661 3285 -28 653 83 0 0 chr5 32382178 32382262 -170703270 - AluS SINE Alu -228 84 1 1007 225 113 6 chr5 32382821 32383132 -170702400 - MER2 DNA MER2_type 0 344 1 2452 76 0 0 chr5 32384044 32384345 -170701187 - AluSc SINE Alu -8 301 1 395 293 21 21 chr5 32384364 32384504 -170701028 + MER5B DNA MER1_type 37 176 -2 527 252 32 92 chr5 32385357 32385575 -170699957 + L2 LINE L2 3070 3274 -39 1317 43 0 22 chr5 32385761 32385945 -170699587 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 280 111 37 0 chr5 32385947 32386001 -170699531 + CT-rich Low_complexity Low_complexity 3 58 0 1808 151 48 0 chr5 32386003 32386294 -170699238 - AluSx SINE Alu -7 305 1 1658 185 3 7 chr5 32387605 32387892 -170697640 - AluJo SINE Alu -22 290 5 535 323 119 16 chr5 32390066 32390385 -170695147 - L3b LINE CR1 -117 1466 1115 796 303 78 24 chr5 32390661 32391044 -170694488 - MLT1I LTR MaLR -3 406 3 378 269 21 50 chr5 32391978 32392119 -170693413 + MLT1K LTR MaLR 450 586 -2 541 326 46 17 chr5 32392836 32393075 -170692457 - MIR SINE MIR -11 251 6 560 307 0 28 chr5 32393159 32393338 -170692194 - MER91B DNA MER1_type -16 174 1 189 314 80 22 chr5 32394965 32395102 -170690430 - MIR3 SINE MIR -6 202 58 549 284 91 11 chr5 32395490 32395666 -170689866 + L3 LINE CR1 1355 1544 -33 351 238 0 8 chr5 32395870 32395988 -170689544 - L1MC4 LINE L1 -1339 6983 1995 201 74 0 0 chr5 32395990 32396017 -170689515 + (CA)n Simple_repeat Simple_repeat 2 28 0 182 347 31 41 chr5 32396581 32396679 -170688853 - MIR3 SINE MIR -31 177 81 259 277 0 15 chr5 32396711 32396776 -170688756 - MIR3 SINE MIR -23 185 122 319 328 82 6 chr5 32397203 32397374 -170688158 + MIR SINE MIR 65 248 -14 253 156 266 16 chr5 32398699 32398763 -170686769 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 32399817 32399838 -170685694 + AT_rich Low_complexity Low_complexity 1 21 0 407 240 58 0 chr5 32400013 32400117 -170685415 + L1ME LINE L1 5508 5617 -504 357 140 0 0 chr5 32401732 32401789 -170683743 - L2 LINE L2 0 3313 3257 2260 67 0 11 chr5 32451789 32452073 -170633459 - AluY SINE Alu -30 281 1 342 221 0 0 chr5 32452075 32452170 -170633362 + L1M4 LINE L1 4376 4470 -1676 270 168 80 24 chr5 32452208 32452333 -170633199 + (TTAA)n Simple_repeat Simple_repeat 4 135 0 207 0 0 0 chr5 32452989 32453012 -170632520 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1591 203 130 53 chr5 32453340 32453466 -170632066 + MLT1D LTR MaLR 1 116 -389 863 135 8 30 chr5 32453466 32453599 -170631933 + FLAM_C SINE Alu 1 130 -3 1591 203 130 53 chr5 32453599 32453941 -170631591 + MLT1D LTR MaLR 116 505 0 226 175 100 0 chr5 32453957 32453997 -170631535 - Alu SINE Alu -141 159 116 358 152 45 0 chr5 32454058 32454124 -170631408 - L1MB7 LINE L1 -207 5977 5909 248 245 208 28 chr5 32454453 32454559 -170630973 + L2 LINE L2 3189 3313 0 2492 161 78 33 chr5 32455025 32455577 -170629955 - MER34C LTR ERV1 -5 580 4 370 65 98 33 chr5 32455776 32455868 -170629664 + GA-rich Low_complexity Low_complexity 5 102 0 2083 114 24 0 chr5 32455955 32456244 -170629288 + AluSx SINE Alu 1 296 -16 891 259 62 99 chr5 32456791 32456850 -170628682 - HAL1 LINE L1 0 2507 2447 2411 71 0 0 chr5 32456850 32457132 -170628400 + AluSx SINE Alu 9 290 -22 891 259 62 99 chr5 32457132 32457416 -170628116 - HAL1 LINE L1 -60 2447 2154 2135 151 0 0 chr5 32457416 32457727 -170627805 - AluSx SINE Alu -1 311 1 891 259 62 99 chr5 32457727 32458178 -170627354 - HAL1 LINE L1 -353 2154 1742 267 133 0 0 chr5 32458225 32458270 -170627262 + (TG)n Simple_repeat Simple_repeat 1 45 0 3209 118 35 0 chr5 32458319 32458770 -170626762 - LTR24 LTR ERV1 0 467 1 502 211 90 8 chr5 32458770 32458903 -170626629 - LTR24-int LTR ERV1 0 5123 4980 2104 130 3 0 chr5 32458932 32459232 -170626300 + AluSx SINE Alu 4 304 -8 2017 118 7 0 chr5 32459697 32459967 -170625565 - AluSx SINE Alu -14 298 27 591 232 97 69 chr5 32459967 32460256 -170625276 - LTR9 LTR ERV1 0 612 316 * 1393 184 19 126 chr5 32460230 32460365 -170625167 - LTR9 LTR ERV1 -229 383 235 2521 75 0 0 chr5 32460365 32460670 -170624862 - AluY SINE Alu -1 310 6 1393 184 19 126 chr5 32460670 32460963 -170624569 - LTR9 LTR ERV1 -377 235 1 541 346 39 41 chr5 32461047 32461349 -170624183 - LTR23-int LTR ERV1 -596 6526 6224 2497 163 74 59 chr5 32461349 32461888 -170623644 - LTR10B LTR ERV1 0 547 1 541 346 39 41 chr5 32461888 32462099 -170623433 - LTR23-int LTR ERV1 -898 6224 6014 1265 135 0 50 chr5 32462230 32462467 -170623065 - AluSg/x SINE Alu 0 318 92 507 176 12 0 chr5 32462567 32462652 -170622880 + AluYa5 SINE Alu 84 169 -142 * 680 117 0 19 chr5 32462647 32462750 -170622782 + AluSg/x SINE Alu 198 298 -11 2270 102 0 0 chr5 32462755 32463049 -170622483 + AluSq SINE Alu 1 294 -19 927 172 55 0 chr5 32463133 32463296 -170622236 - AluSg/x SINE Alu -14 296 125 2253 121 0 0 chr5 32463530 32463836 -170621696 + AluSg SINE Alu 5 310 0 2372 95 3 0 chr5 32464491 32464796 -170620736 - AluSp SINE Alu -7 306 1 334 288 35 70 chr5 32465667 32465896 -170619636 - LTR23-int LTR ERV1 -3797 4938 4718 324 305 70 91 chr5 32466277 32466496 -170619036 - LTR23-int LTR ERV1 -4374 4052 3830 1812 119 101 0 chr5 32466496 32466764 -170618768 + AluSg SINE Alu 1 295 -15 324 305 70 91 chr5 32466764 32466948 -170618584 - LTR23-int LTR ERV1 -4596 3830 3660 2288 87 33 3 chr5 32466948 32467248 -170618284 - AluSg1 SINE Alu 0 309 1 324 305 70 91 chr5 32467248 32467361 -170618171 - LTR23-int LTR ERV1 -4766 3660 3546 675 309 102 25 chr5 32467426 32467893 -170617639 - LTR23-int LTR ERV1 -4064 3730 219 682 164 19 0 chr5 32468019 32468123 -170617409 - U6 snRNA snRNA -1 106 1 2125 125 0 0 chr5 32468295 32468583 -170616949 - AluSc SINE Alu -21 288 1 2449 82 3 0 chr5 32469557 32469861 -170615671 - AluY SINE Alu -6 305 1 232 33 67 0 chr5 32469959 32469989 -170615543 + U6 snRNA snRNA 1 32 -75 1037 181 0 0 chr5 32469996 32470162 -170615370 + AluJb SINE Alu 131 296 -16 389 187 0 22 chr5 32470291 32470382 -170615150 + GA-rich Low_complexity Low_complexity 2 90 0 2388 53 0 20 chr5 32470473 32470772 -170614760 + AluY SINE Alu 1 293 -18 481 192 0 29 chr5 32471064 32471168 -170614364 - LTR23-int LTR ERV1 -4378 745 645 391 272 98 22 chr5 32471880 32472104 -170613428 - L1ME4a LINE L1 -226 5895 5655 313 278 102 9 chr5 32472125 32472346 -170613186 - L1ME4a LINE L1 -722 5575 5317 307 289 149 82 chr5 32472471 32472943 -170612589 - L1ME4a LINE L1 -989 5157 4718 769 151 0 17 chr5 32472943 32473062 -170612470 + FLAM_C SINE Alu 1 117 -16 307 289 149 82 chr5 32473062 32473133 -170612399 - L1ME4a LINE L1 -1428 4718 4653 1914 167 45 12 chr5 32473133 32473469 -170612063 - MER7A DNA MER2_type 0 346 2 307 289 149 82 chr5 32473469 32473582 -170611950 - L1ME4a LINE L1 -1493 4653 4456 447 269 88 0 chr5 32473769 32473929 -170611603 - MIR SINE MIR -22 240 67 342 294 100 61 chr5 32474720 32475131 -170610401 - L1ME4a LINE L1 -2028 4118 3692 428 288 184 14 chr5 32475616 32475828 -170609704 - MIR SINE MIR -4 258 11 228 271 139 8 chr5 32475970 32476099 -170609433 - L1ME4a LINE L1 -3264 2882 2737 1166 303 46 39 chr5 32476289 32476900 -170608632 + HERVL LTR ERVL 3680 4294 -1360 338 341 61 0 chr5 32476989 32477153 -170608379 + LTR16A LTR ERVL 79 252 -198 743 87 0 29 chr5 32479201 32479304 -170606228 + HY3 scRNA scRNA 1 100 -1 2147 110 0 7 chr5 32479596 32479895 -170605637 + AluSx SINE Alu 1 297 -15 2170 102 0 56 chr5 32479913 32480237 -170605295 + AluSx SINE Alu 1 306 -6 1646 160 26 45 chr5 32480550 32480696 -170604836 + AluJb SINE Alu 1 148 -164 2325 97 3 0 chr5 32480696 32480994 -170604538 + AluSp SINE Alu 1 299 -14 1646 160 26 45 chr5 32480994 32481159 -170604373 + AluJb SINE Alu 148 306 -6 566 237 20 20 chr5 32481172 32481324 -170604208 + L1MB8 LINE L1 6027 6178 0 22 88 0 0 chr5 32481473 32481530 -170604002 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr5 32481666 32481689 -170603843 + AT_rich Low_complexity Low_complexity 1 23 0 2214 108 3 0 chr5 32482346 32482643 -170602889 - AluSx SINE Alu -14 298 1 1593 174 23 10 chr5 32483274 32483579 -170601953 + L1MB2 LINE L1 5863 6171 0 30 0 0 0 chr5 32483641 32483671 -170601861 + AT_rich Low_complexity Low_complexity 1 30 0 504 225 69 81 chr5 32483738 32483898 -170601634 - MIR SINE MIR -95 167 10 264 326 82 20 chr5 32483975 32484073 -170601459 - L2 LINE L2 -23 3249 3146 1681 157 40 23 chr5 32484944 32485244 -170600288 + AluJo SINE Alu 1 305 -7 240 35 0 0 chr5 32485441 32485470 -170600062 + (CA)n Simple_repeat Simple_repeat 1 29 0 227 200 18 0 chr5 32485491 32485546 -170599986 + (CA)n Simple_repeat Simple_repeat 2 57 0 1596 231 122 49 chr5 32486051 32486605 -170598927 + MLT1E2 LTR MaLR 4 623 -3 333 68 0 0 chr5 32487748 32487792 -170597740 + (CA)n Simple_repeat Simple_repeat 2 45 0 1979 141 0 13 chr5 32487876 32488181 -170597351 + AluJo SINE Alu 1 301 -11 1340 157 19 9 chr5 32488257 32488473 -170597059 + MER20 DNA MER1_type 1 218 -1 699 242 36 62 chr5 32488874 32489068 -170596464 + MER5A DNA MER1_type 1 189 0 2088 136 3 0 chr5 32489491 32489793 -170595739 + AluJb SINE Alu 1 303 -9 215 317 33 0 chr5 32490418 32490478 -170595054 + MIR SINE MIR 45 106 -102 2495 83 0 0 chr5 32492428 32492741 -170592791 + AluSq SINE Alu 1 313 0 2224 122 0 13 chr5 32493647 32493783 -170591749 + AluSx SINE Alu 1 137 -175 2427 88 3 0 chr5 32493783 32494090 -170591442 + AluSx SINE Alu 1 308 -4 2224 122 0 13 chr5 32494090 32494264 -170591268 + AluSx SINE Alu 137 307 -5 806 320 96 64 chr5 32496059 32496229 -170589303 + L2 LINE L2 1611 1774 -1540 1199 214 130 49 chr5 32496229 32496575 -170588957 + MLT1A2 LTR MaLR 1 374 0 806 320 96 64 chr5 32496575 32497411 -170588121 + L2 LINE L2 1774 2650 -664 2306 80 40 0 chr5 32498189 32498488 -170587044 + AluY SINE Alu 1 311 0 991 167 13 13 chr5 32498864 32499020 -170586512 - FRAM SINE Alu -10 156 1 730 85 0 0 chr5 32499293 32499387 -170586145 + AluSp/q SINE Alu 211 304 -9 338 289 70 106 chr5 32499417 32499690 -170585842 + L2 LINE L2 2995 3257 -15 222 310 52 9 chr5 32499770 32499886 -170585646 - L2 LINE L2 -1 3271 3151 309 138 52 17 chr5 32501462 32501520 -170584012 - MIR SINE MIR -187 75 16 2124 117 3 0 chr5 32501691 32501989 -170583543 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 32501998 32502019 -170583513 + AT_rich Low_complexity Low_complexity 1 21 0 184 273 0 45 chr5 32502345 32502411 -170583121 - L3 LINE CR1 -2 1575 1513 1172 170 5 45 chr5 32502433 32502657 -170582875 + AluJo SINE Alu 84 298 -14 885 191 30 6 chr5 32503298 32503466 -170582066 - MER58B DNA MER1_type 0 341 170 944 161 68 6 chr5 32503466 32503627 -170581905 + FAM SINE Alu 1 171 -4 1289 195 17 0 chr5 32503668 32503909 -170581623 - Charlie1a DNA MER1_type -276 1179 935 966 215 139 11 chr5 32503924 32504147 -170581385 - Charlie1a DNA MER1_type -2229 532 339 189 0 0 0 chr5 32504147 32504168 -170581364 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 966 215 139 11 chr5 32504168 32504394 -170581138 - Charlie1a DNA MER1_type -2422 339 4 2376 81 0 10 chr5 32504981 32505288 -170580244 + AluY SINE Alu 8 311 0 945 288 156 9 chr5 32506473 32506903 -170578629 - MLT1J LTR MaLR -16 495 3 542 218 98 12 chr5 32507484 32507647 -170577885 - MER58C DNA MER1_type -1 214 32 1746 173 51 27 chr5 32507751 32508087 -170577445 - MER2 DNA MER2_type 0 344 1 1713 154 13 33 chr5 32508496 32508795 -170576737 + AluJb SINE Alu 1 293 -19 482 286 13 0 chr5 32508806 32508956 -170576576 + MIR SINE MIR 38 188 -63 23 86 0 0 chr5 32509466 32509524 -170576008 + AT_rich Low_complexity Low_complexity 1 58 0 396 0 0 0 chr5 32509841 32509885 -170575647 + (TG)n Simple_repeat Simple_repeat 2 45 0 1258 164 36 86 chr5 32510245 32510525 -170575007 + AluJo SINE Alu 39 304 -8 557 211 134 6 chr5 32510552 32510723 -170574809 - MIR SINE MIR 0 262 70 2219 68 0 58 chr5 32510904 32511214 -170574318 + AluY SINE Alu 1 292 -19 2120 125 0 7 chr5 32512021 32512326 -170573206 + AluJb SINE Alu 1 303 -9 2546 44 0 7 chr5 32513037 32513334 -170572198 + AluY SINE Alu 1 295 -16 1544 171 19 11 chr5 32513401 32513670 -170571862 + AluJo SINE Alu 14 284 -28 23 0 0 0 chr5 32513706 32513729 -170571803 + AT_rich Low_complexity Low_complexity 1 23 0 2243 99 10 0 chr5 32513799 32514093 -170571439 - AluSq SINE Alu -16 297 1 271 310 170 0 chr5 32515019 32515119 -170570413 - MIR SINE MIR -73 135 19 2267 144 40 11 chr5 32515260 32515607 -170569925 - THE1B LTR MaLR -7 357 1 12211 84 23 13 chr5 32515607 32516755 -170568777 - THE1B-int LTR MaLR 0 1580 410 2186 125 3 0 chr5 32516755 32517050 -170568482 + AluSx SINE Alu 1 296 -16 12211 84 23 13 chr5 32517050 32517465 -170568067 - THE1B-int LTR MaLR -1170 410 1 2245 137 41 52 chr5 32517465 32517673 -170567859 - THE1B LTR MaLR 0 364 160 2256 112 3 0 chr5 32517673 32517976 -170567556 + AluSp SINE Alu 1 304 -9 2245 137 41 52 chr5 32517976 32518133 -170567399 - THE1B LTR MaLR -204 160 3 298 143 130 39 chr5 32518216 32518293 -170567239 - LTR23 LTR ERV1 -78 359 276 1962 144 20 10 chr5 32518329 32518627 -170566905 + AluJb SINE Alu 1 301 -11 2338 81 14 0 chr5 32519301 32519597 -170565935 - AluSp SINE Alu -13 300 1 22 0 0 0 chr5 32519804 32519826 -170565706 + AT_rich Low_complexity Low_complexity 1 22 0 552 133 105 0 chr5 32519833 32519938 -170565594 + L1MA4 LINE L1 6178 6293 -7 2445 177 115 0 chr5 32520173 32520626 -170564906 + MLT1D LTR MaLR 1 505 0 340 241 167 0 chr5 32521237 32521345 -170564187 + MIR SINE MIR 84 209 -53 231 61 0 0 chr5 32521884 32521917 -170563615 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 556 231 28 0 chr5 32521968 32522076 -170563456 - L2 LINE L2 0 3313 3203 457 77 0 90 chr5 32522193 32522271 -170563261 - FLAM_C SINE Alu -4 139 69 784 135 7 64 chr5 32522197 32522338 -170563194 - AluJo/FLAM SINE Alu -169 133 1 23 0 0 0 chr5 32523300 32523323 -170562209 + AT_rich Low_complexity Low_complexity 1 23 0 2150 103 0 26 chr5 32523930 32524240 -170561292 + AluY SINE Alu 1 302 -9 2060 134 7 13 chr5 32524310 32524617 -170560915 - AluJo SINE Alu -7 305 1 2402 78 10 7 chr5 32524884 32525191 -170560341 - AluSc SINE Alu -1 308 1 878 229 117 65 chr5 32525192 32525533 -170559999 - L1MA9 LINE L1 -38 6274 5916 2502 38 7 3 chr5 32526088 32526381 -170559151 + AluY SINE Alu 1 294 -17 2446 76 0 7 chr5 32526578 32526881 -170558651 + AluSg SINE Alu 1 301 -9 193 365 88 7 chr5 32528029 32528166 -170557366 + L2 LINE L2 3125 3272 0 371 263 78 54 chr5 32529308 32529810 -170555722 + L1MC4a LINE L1 4325 4838 -1308 460 290 93 37 chr5 32529810 32530079 -170555453 - MLT1J2 LTR MaLR -8 442 159 374 239 33 0 chr5 32530086 32530178 -170555354 - MLT1J1 LTR MaLR -351 95 1 1683 146 14 41 chr5 32530392 32530686 -170554846 - AluJb SINE Alu -16 296 11 213 94 0 0 chr5 32530698 32530730 -170554802 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 603 315 62 31 chr5 32530733 32531085 -170554447 - HERV16 LTR ERVL -4375 621 259 985 304 43 35 chr5 32531287 32531655 -170553877 - LTR16C LTR ERVL -1 490 120 462 302 12 64 chr5 32531850 32532022 -170553510 + L1MC4a LINE L1 5494 5656 -2152 2118 186 62 105 chr5 32532035 32532419 -170553113 + LTR8A LTR ERV1 1 347 -380 2275 126 3 0 chr5 32532419 32532720 -170552812 - AluSx SINE Alu -10 302 1 2118 186 62 105 chr5 32532720 32532981 -170552551 + LTR8A LTR ERV1 347 618 -109 2552 104 16 16 chr5 32532998 32533373 -170552159 - THE1C LTR MaLR 0 375 1 10832 105 33 11 chr5 32533373 32533430 -170552102 - THE1C-int LTR MaLR 0 1580 1526 2177 117 3 0 chr5 32533430 32533713 -170551819 + AluSx SINE Alu 1 284 -28 366 23 0 0 chr5 32533713 32533756 -170551776 + (CA)n Simple_repeat Simple_repeat 2 44 0 10832 105 33 11 chr5 32533756 32535227 -170550305 - THE1C-int LTR MaLR -53 1527 17 2638 101 13 16 chr5 32535231 32535607 -170549925 - THE1C LTR MaLR 0 375 1 414 117 64 138 chr5 32535610 32535704 -170549828 + LTR8A LTR ERV1 641 727 0 253 309 133 6 chr5 32535727 32535908 -170549624 + L1MC4a LINE L1 5712 5915 -1893 180 111 0 0 chr5 32535914 32535941 -170549591 + (T)n Simple_repeat Simple_repeat 1 27 0 2119 118 42 63 chr5 32536162 32536545 -170548987 + THE1C LTR MaLR 1 375 0 1909 149 10 13 chr5 32536714 32536850 -170548682 + AluJb SINE Alu 1 136 -176 2268 107 3 3 chr5 32536850 32537149 -170548383 + AluSq SINE Alu 1 299 -14 1909 149 10 13 chr5 32537149 32537314 -170548218 + AluJb SINE Alu 136 301 -11 424 302 71 4 chr5 32537533 32537815 -170547717 + L1MC4a LINE L1 4779 5076 -1070 21 57 0 0 chr5 32537947 32537982 -170547550 + AT_rich Low_complexity Low_complexity 1 35 0 629 278 99 50 chr5 32538005 32538429 -170547103 + L1MC4a LINE L1 5310 5754 -367 604 154 442 24 chr5 32538535 32538743 -170546789 + LTR48 LTR ERV1 1 295 -492 794 184 93 77 chr5 32538762 32539090 -170546442 + LTR48 LTR ERV1 245 784 -3 489 219 0 0 chr5 32539101 32539215 -170546317 + (CATA)n Simple_repeat Simple_repeat 3 116 0 1439 164 44 25 chr5 32539215 32539522 -170546010 - AluJb SINE Alu 0 316 5 24 0 0 0 chr5 32539536 32539560 -170545972 + AT_rich Low_complexity Low_complexity 1 24 0 844 242 10 10 chr5 32539567 32539765 -170545767 - MER3 DNA MER1_type -3 206 9 398 277 157 6 chr5 32539803 32539962 -170545570 + MER5A DNA MER1_type 7 189 0 3988 175 150 144 chr5 32540843 32540877 -170544655 + L1MC4a LINE L1 5874 5906 -1902 2264 87 6 10 chr5 32540877 32541188 -170544344 + AluSq SINE Alu 2 311 -2 3988 175 150 144 chr5 32541188 32541226 -170544306 + L1MC4a LINE L1 5906 5942 -1866 207 0 0 0 chr5 32541226 32541249 -170544283 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 629 188 23 30 chr5 32541253 32541386 -170544146 + FLAM_C SINE Alu 2 133 0 3988 175 150 144 chr5 32541386 32541698 -170543834 + L1MC4a LINE L1 5944 6253 -1555 2417 97 0 0 chr5 32541698 32541997 -170543535 + AluSx SINE Alu 1 299 -13 3988 175 150 144 chr5 32541997 32542229 -170543303 + L1MC4a LINE L1 6253 6482 -1326 809 134 7 78 chr5 32542229 32542315 -170543217 - FLAM_C SINE Alu -180 132 58 4110 105 22 2 chr5 32542315 32542905 -170542627 + LTR43 LTR ERV1 1 602 0 809 134 7 78 chr5 32542905 32542960 -170542572 - FLAM_C SINE Alu -254 58 1 3988 175 150 144 chr5 32542960 32544118 -170541414 + L1MC4a LINE L1 6482 7808 0 1920 53 0 4 chr5 32544341 32544604 -170540928 + AluY SINE Alu 59 320 0 4170 149 75 53 chr5 32544605 32545062 -170540470 + L1MB4 LINE L1 5278 5723 -457 261 0 0 0 chr5 32545062 32545091 -170540441 + (TA)n Simple_repeat Simple_repeat 2 30 0 4170 149 75 53 chr5 32545091 32545245 -170540287 + L1MB4 LINE L1 5723 5872 -308 2537 100 14 14 chr5 32545245 32545606 -170539926 + THE1B LTR MaLR 1 361 -3 4170 149 75 53 chr5 32545606 32545747 -170539785 + L1MB4 LINE L1 5872 6008 -172 2174 126 0 0 chr5 32545747 32546041 -170539491 + AluSx SINE Alu 2 295 -17 4170 149 75 53 chr5 32546041 32546152 -170539380 + L1MB4 LINE L1 6008 6162 -18 705 264 48 9 chr5 32546576 32546803 -170538729 + L1M4 LINE L1 3359 3594 -2552 1078 101 89 0 chr5 32546804 32546962 -170538570 - AluSg/x SINE Alu -4 306 135 976 160 0 0 chr5 32546991 32547141 -170538391 + FRAM SINE Alu 1 150 -16 659 88 29 0 chr5 32547145 32547247 -170538285 + (GGAGAA)n Simple_repeat Simple_repeat 2 106 0 1032 104 0 17 chr5 32547248 32547421 -170538111 + (GAAA)n Simple_repeat Simple_repeat 4 173 0 282 29 0 0 chr5 32547423 32547458 -170538074 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 983 194 26 67 chr5 32547488 32547756 -170537776 + L1M4 LINE L1 3764 4020 -2126 1456 218 24 36 chr5 32547856 32548329 -170537203 - LTR24-int LTR ERV1 -4515 608 1 2736 150 17 28 chr5 32548329 32548471 -170537061 - LTR24 LTR ERV1 0 467 325 2389 76 3 16 chr5 32548471 32548774 -170536758 + AluSc SINE Alu 1 299 -10 2736 150 17 28 chr5 32548774 32549103 -170536429 - LTR24 LTR ERV1 -142 325 1 1388 222 29 110 chr5 32549103 32549437 -170536095 - HAL1 LINE L1 -835 1672 1421 2137 132 0 3 chr5 32549437 32549741 -170535791 - AluJo SINE Alu -9 303 1 1388 222 29 110 chr5 32549741 32550099 -170535433 - HAL1 LINE L1 -1086 1421 1036 311 284 96 76 chr5 32550107 32550144 -170535388 - HAL1 LINE L1 -1674 833 798 2381 70 36 3 chr5 32550144 32550445 -170535087 + AluY SINE Alu 1 311 0 311 284 96 76 chr5 32550445 32550657 -170534875 - HAL1 LINE L1 -1709 798 579 235 267 15 92 chr5 32550692 32550823 -170534709 + HAL1 LINE L1 742 862 -1645 2163 120 0 10 chr5 32551190 32551490 -170534042 - AluSx SINE Alu -11 301 5 317 306 105 8 chr5 32551586 32551739 -170533793 + MIR SINE MIR 49 214 -48 761 289 101 45 chr5 32552057 32552462 -170533070 - LTR33 LTR ERVL 0 521 83 2390 104 3 0 chr5 32552462 32552771 -170532761 + AluSq SINE Alu 2 311 -2 761 289 101 45 chr5 32552771 32552852 -170532680 - LTR33 LTR ERVL -438 83 8 2092 125 17 0 chr5 32554084 32554381 -170531151 + AluSq SINE Alu 1 302 -11 276 296 139 0 chr5 32554646 32554761 -170530771 - MER102b DNA MER1_type -1 340 210 273 302 52 0 chr5 32554797 32554893 -170530639 - MER102b DNA MER1_type -240 101 1 500 209 17 0 chr5 32554902 32555017 -170530515 + MER5B DNA MER1_type 2 118 -60 2473 77 3 0 chr5 32555111 32555409 -170530123 + AluSp SINE Alu 1 299 -14 832 133 126 7 chr5 32555544 32555695 -170529837 - MER3 DNA MER1_type 0 209 41 1834 165 0 46 chr5 32555795 32556122 -170529410 - AluSx SINE Alu 0 312 1 931 172 12 12 chr5 32556207 32556376 -170529156 + FRAM SINE Alu 3 171 -5 2330 94 0 0 chr5 32557220 32557518 -170528014 + AluSx SINE Alu 7 304 -8 2211 114 3 3 chr5 32557867 32558164 -170527368 - AluSx SINE Alu -15 297 1 216 0 0 0 chr5 32558164 32558188 -170527344 + (T)n Simple_repeat Simple_repeat 1 24 0 187 352 65 0 chr5 32558322 32558430 -170527102 - L2 LINE L2 -42 3230 3116 2235 97 3 10 chr5 32559091 32559401 -170526131 + AluSg1 SINE Alu 1 308 -1 2110 137 0 0 chr5 32559462 32559762 -170525770 - AluSx SINE Alu -12 300 1 1022 131 0 0 chr5 32560103 32560256 -170525276 - MER6A DNA MER2_type -1 604 452 1763 186 0 0 chr5 32560256 32560541 -170524991 - AluJb SINE Alu -19 293 9 566 163 0 0 chr5 32560541 32560633 -170524899 - AluJ/FLAM SINE Alu -219 93 2 2653 141 51 0 chr5 32560633 32561067 -170524465 - MER6A DNA MER2_type -149 456 1 2129 133 0 13 chr5 32561138 32561454 -170524078 - AluSx SINE Alu 0 312 1 2354 93 3 3 chr5 32561661 32561963 -170523569 + AluSp SINE Alu 1 302 -11 683 217 49 14 chr5 32562357 32562500 -170523032 + AluJo SINE Alu 4 151 -161 343 89 0 0 chr5 32562500 32562545 -170522987 - Alu SINE Alu -256 45 1 232 278 46 74 chr5 32562550 32562658 -170522874 - MIR SINE MIR -61 147 43 245 264 0 0 chr5 32562868 32562921 -170522611 + L2 LINE L2 3206 3258 -14 1301 150 21 30 chr5 32563764 32563997 -170521535 - AluJo SINE Alu -73 239 9 314 23 23 0 chr5 32564030 32564073 -170521459 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 9328 67 4 9 chr5 32564073 32566041 -170519491 - L1PA6 LINE L1 -24 6130 4170 2555 59 0 7 chr5 32566286 32566592 -170518940 + AluY SINE Alu 1 304 -7 1974 72 0 4 chr5 32567794 32568031 -170517501 + AluSq SINE Alu 2 237 -76 2264 96 0 0 chr5 32568263 32568581 -170516951 - AluSx SINE Alu 0 318 1 1203 249 87 15 chr5 32568987 32569320 -170516212 - LTR16A LTR ERVL -8 442 86 2002 123 0 45 chr5 32569446 32569584 -170515948 + AluSx SINE Alu 1 144 -168 2251 76 59 0 chr5 32569584 32569873 -170515659 + AluSq SINE Alu 3 308 -5 2002 123 0 45 chr5 32569873 32570043 -170515489 + AluSx SINE Alu 144 295 -17 2232 85 7 0 chr5 32570537 32570841 -170514691 + AluSq SINE Alu 1 306 0 2472 204 65 108 chr5 32571545 32571692 -170513840 - L1MC4a LINE L1 0 7808 7656 1240 180 172 8 chr5 32571692 32571948 -170513584 - AluJb SINE Alu -4 298 1 2472 204 65 108 chr5 32571948 32572610 -170512922 - L1MC4a LINE L1 -152 7656 7127 1738 164 33 30 chr5 32572616 32572920 -170512612 - AluJo SINE Alu -7 305 1 712 100 10 270 chr5 32572945 32573070 -170512462 + Charlie5 DNA MER1_type 2403 2480 -144 426 119 0 0 chr5 32573070 32573129 -170512403 + AluJ/FRAM SINE Alu 232 290 -22 712 100 10 270 chr5 32573129 32573245 -170512287 + Charlie5 DNA MER1_type 2480 2624 0 410 250 17 42 chr5 32573257 32573377 -170512155 + MIR SINE MIR 144 260 -2 2305 105 20 0 chr5 32573554 32573860 -170511672 + AluSx SINE Alu 1 312 0 1153 244 8 0 chr5 32574458 32574696 -170510836 - MIR SINE MIR -21 241 2 1075 249 112 27 chr5 32575623 32576061 -170509471 - LTR33 LTR ERVL 0 521 47 591 320 62 89 chr5 32576435 32576636 -170508896 - L2 LINE L2 0 3272 3067 1973 148 3 7 chr5 32576636 32576939 -170508593 + AluJb SINE Alu 1 302 -10 591 320 62 89 chr5 32576939 32576952 -170508580 - L2 LINE L2 -205 3067 3055 1617 166 50 21 chr5 32576952 32577235 -170508297 + AluJo SINE Alu 9 299 -13 2502 81 3 0 chr5 32577237 32577546 -170507986 + AluSp SINE Alu 1 310 -3 591 320 62 89 chr5 32577546 32577975 -170507557 - L2 LINE L2 -218 3054 2659 757 208 13 0 chr5 32578007 32578156 -170507376 - MER58B DNA MER1_type -12 329 179 2133 116 0 0 chr5 32578163 32578478 -170507054 + AluSx SINE Alu 1 315 0 272 317 241 20 chr5 32578571 32578820 -170506712 - L2 LINE L2 -706 2608 2305 726 153 0 0 chr5 32578852 32578963 -170506569 + AluSg/x SINE Alu 193 303 -6 421 327 132 42 chr5 32579000 32579410 -170506122 - L2 LINE L2 -1862 1452 1006 181 324 185 17 chr5 32579416 32579654 -170505878 - L2 LINE L2 -2848 466 189 632 174 76 70 chr5 32580093 32580145 -170505387 - MER96 DNA MER1_type? 0 175 125 1336 136 24 16 chr5 32580145 32580395 -170505137 + L1MA4 LINE L1 6044 6295 -5 632 174 76 70 chr5 32580395 32580514 -170505018 - MER96 DNA MER1_type? -50 125 3 23 0 0 0 chr5 32582245 32582268 -170503264 + AT_rich Low_complexity Low_complexity 1 23 0 2053 153 3 6 chr5 32582268 32582581 -170502951 + AluJb SINE Alu 1 312 0 25 31 0 0 chr5 32582611 32582643 -170502889 + AT_rich Low_complexity Low_complexity 1 32 0 2324 105 0 0 chr5 32583160 32583454 -170502078 - AluSx SINE Alu -18 294 1 2519 87 0 0 chr5 32583932 32584243 -170501289 + AluSq SINE Alu 1 311 -2 245 329 67 20 chr5 32584474 32584623 -170500909 + MER5B DNA MER1_type 23 178 0 2055 144 0 0 chr5 32584652 32584950 -170500582 - AluSx SINE Alu -14 298 1 296 306 90 75 chr5 32585880 32586312 -170499220 - L2 LINE L2 0 3313 2874 184 301 185 34 chr5 32586524 32586670 -170498862 - MIR SINE MIR -1 261 94 23 54 0 0 chr5 32587970 32588007 -170497525 + GC_rich Low_complexity Low_complexity 1 37 0 233 191 0 0 chr5 32588103 32588145 -170497387 + (CGG)n Simple_repeat Simple_repeat 3 44 0 282 164 0 0 chr5 32588852 32588907 -170496625 + CT-rich Low_complexity Low_complexity 3 57 0 1346 177 5 0 chr5 32590384 32590593 -170494939 - AluJb SINE Alu -102 210 1 231 282 109 64 chr5 32591736 32591892 -170493640 + MIR SINE MIR 21 183 -79 1803 104 31 62 chr5 32592632 32592920 -170492612 - AluJb SINE Alu -15 297 19 210 367 109 8 chr5 32593904 32594032 -170491500 - L3b LINE CR1 -3 1580 1440 2382 83 0 3 chr5 32594139 32594439 -170491093 - AluSc SINE Alu -10 299 1 429 281 35 0 chr5 32596028 32596142 -170489390 - MIR SINE MIR -2 260 143 1250 234 105 41 chr5 32596143 32596608 -170488924 - MLT1D LTR MaLR -2 503 9 351 349 31 0 chr5 32596617 32596746 -170488786 - MIR SINE MIR -118 144 12 1236 312 68 11 chr5 32596921 32597466 -170488066 + L2 LINE L2 2125 2700 -614 1572 114 49 92 chr5 32597469 32597837 -170487695 - L1MC1 LINE L1 0 6333 5982 862 158 0 0 chr5 32597848 32597981 -170487551 - FLAM_C SINE Alu 0 133 1 323 279 236 13 chr5 32597981 32598218 -170487314 + L2 LINE L2 2688 2977 -337 185 365 19 10 chr5 32598286 32598390 -170487142 + L2 LINE L2 3139 3243 -70 2348 86 0 17 chr5 32598456 32598758 -170486774 + AluSg SINE Alu 1 297 -13 585 284 0 31 chr5 32599034 32599196 -170486336 - MIR SINE MIR -102 160 4 1708 157 26 0 chr5 32600417 32600592 -170484940 - AluJb SINE Alu 0 309 140 245 27 54 0 chr5 32600592 32600629 -170484903 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1950 135 0 54 chr5 32600629 32600926 -170484606 - AluSg SINE Alu -29 281 1 305 24 24 0 chr5 32600932 32600974 -170484558 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1708 157 26 0 chr5 32600974 32601084 -170484448 - AluJb SINE Alu -173 136 9 2271 118 0 10 chr5 32601528 32601842 -170483690 + AluSx SINE Alu 1 311 -1 331 297 51 8 chr5 32602059 32602177 -170483355 + L2 LINE L2 3189 3311 -2 186 149 0 106 chr5 32602492 32602539 -170482993 - L2 LINE L2 0 3313 3272 2272 86 0 0 chr5 32602582 32602887 -170482645 - AluY SINE Alu 0 305 1 1596 250 213 37 chr5 32602940 32603966 -170481566 + L2 LINE L2 1859 3150 -163 2434 88 3 3 chr5 32603966 32604274 -170481258 - AluSg SINE Alu -2 308 1 1596 250 213 37 chr5 32604274 32604473 -170481059 + L2 LINE L2 3150 3313 0 508 238 98 28 chr5 32604471 32604614 -170480918 - MER5B DNA MER1_type -25 153 1 * 190 389 14 29 chr5 32604982 32605121 -170480411 + L2 LINE L2 2929 3065 -207 1237 328 88 32 chr5 32605965 32606684 -170478848 + L3 LINE CR1 381 1139 -438 243 344 123 53 chr5 32606707 32607420 -170478112 + L2 LINE L2 1007 1669 -1645 2442 80 0 3 chr5 32607420 32607722 -170477810 - AluSg SINE Alu -9 301 1 243 344 123 53 chr5 32607722 32608388 -170477144 + L2 LINE L2 1669 2482 -832 434 321 56 19 chr5 32608432 32608647 -170476885 + L3 LINE CR1 1254 1476 -101 261 279 96 59 chr5 32608769 32608905 -170476627 - MIR SINE MIR -109 153 13 25 0 0 0 chr5 32609134 32609159 -170476373 + AT_rich Low_complexity Low_complexity 1 25 0 1483 184 53 28 chr5 32609159 32609177 -170476355 - AluJo SINE Alu -23 289 273 2807 93 3 8 chr5 32609177 32609554 -170475978 - THE1C LTR MaLR 0 375 1 1483 184 53 28 chr5 32609554 32609699 -170475833 - AluJo SINE Alu -39 273 114 189 0 0 0 chr5 32609699 32609720 -170475812 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1483 184 53 28 chr5 32609720 32609837 -170475695 - AluJo SINE Alu -198 114 1 186 43 0 0 chr5 32610589 32610612 -170474920 + (T)n Simple_repeat Simple_repeat 1 23 0 270 345 0 61 chr5 32610683 32610831 -170474701 + MIR3 SINE MIR 35 173 -35 2111 131 0 0 chr5 32610831 32611136 -170474396 + AluSq SINE Alu 1 305 0 933 227 9 40 chr5 32611213 32611438 -170474094 - MLT1A1 LTR MaLR 0 365 148 2403 72 0 3 chr5 32611439 32611732 -170473800 - AluY SINE Alu -19 292 1 429 167 0 94 chr5 32611732 32611828 -170473704 - MLT1A1 LTR MaLR -287 87 1 361 311 66 9 chr5 32612048 32612154 -170473378 - MIR3 SINE MIR -36 172 79 204 40 0 0 chr5 32612657 32612682 -170472850 + (TG)n Simple_repeat Simple_repeat 1 25 0 732 185 0 8 chr5 32612965 32613104 -170472428 - FLAM_A SINE Alu 0 138 1 256 279 15 0 chr5 32613107 32613175 -170472357 - MLT1J2 LTR MaLR -37 413 345 483 215 0 0 chr5 32613219 32613340 -170472192 + (CA)n Simple_repeat Simple_repeat 1 121 0 407 239 11 0 chr5 32613570 32613658 -170471874 - MLT1J2 LTR MaLR -121 329 241 276 298 12 0 chr5 32613732 32613816 -170471716 - MLT1J LTR MaLR -324 187 103 184 274 57 89 chr5 32614065 32614189 -170471343 + L2 LINE L2 2933 3052 -220 1886 163 41 24 chr5 32614267 32614636 -170470896 + THE1C LTR MaLR 1 375 0 704 252 36 104 chr5 32615717 32615761 -170469771 - L2 LINE L2 0 3313 3268 2682 50 0 0 chr5 32615761 32616064 -170469468 + AluY SINE Alu 1 303 -8 704 252 36 104 chr5 32616064 32616440 -170469092 - L2 LINE L2 -45 3268 2922 2357 109 0 3 chr5 32616656 32616967 -170468565 - AluSg SINE Alu 0 310 1 321 141 77 67 chr5 32617807 32617934 -170467598 + MER20 DNA MER1_type 5 179 -40 1805 152 34 7 chr5 32617934 32618231 -170467301 + AluJo SINE Alu 1 305 -7 321 141 77 67 chr5 32618231 32618273 -170467259 + MER20 DNA MER1_type 179 219 0 195 42 0 0 chr5 32618661 32618685 -170466847 + (TAA)n Simple_repeat Simple_repeat 2 25 0 579 245 20 26 chr5 32618691 32618842 -170466690 - MIR SINE MIR -10 252 103 2316 49 0 21 chr5 32619214 32619525 -170466007 - AluSg SINE Alu 0 305 1 602 290 96 32 chr5 32619525 32619839 -170465693 - LTR16C LTR ERVL -6 485 152 255 341 18 90 chr5 32619930 32620097 -170465435 - L2 LINE L2 -94 3178 3024 208 192 39 19 chr5 32620428 32620480 -170465052 + MIR SINE MIR 81 133 -75 475 255 31 19 chr5 32620548 32620709 -170464823 - MER5A DNA MER1_type -18 171 9 919 215 63 5 chr5 32620766 32620971 -170464561 - MER20 DNA MER1_type -2 217 1 491 302 151 0 chr5 32620991 32621150 -170464382 - MER5A DNA MER1_type -3 186 4 1523 183 70 45 chr5 32622338 32622493 -170463039 + MLT1A1 LTR MaLR 1 151 -214 2409 94 0 0 chr5 32622493 32622790 -170462742 + AluSx SINE Alu 1 297 -15 1523 183 70 45 chr5 32622790 32622990 -170462542 + MLT1A1 LTR MaLR 151 365 0 192 352 32 24 chr5 32623573 32623698 -170461834 - MIR SINE MIR -29 233 108 1774 176 0 16 chr5 32624496 32624802 -170460730 - AluJb SINE Alu -11 301 1 228 143 0 0 chr5 32624957 32624999 -170460533 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2176 94 47 3 chr5 32625358 32625657 -170459875 - AluSx SINE Alu 0 312 1 938 224 9 85 chr5 32626129 32626460 -170459072 + L1ME1 LINE L1 5777 6082 -84 299 203 0 192 chr5 32626403 32626585 -170458947 + L1MA10 LINE L1 6185 6331 -3 * 1844 157 31 0 chr5 32627103 32627389 -170458143 - AluJb SINE Alu -17 295 1 243 103 0 0 chr5 32627941 32627980 -170457552 + (TTGTG)n Simple_repeat Simple_repeat 3 41 0 2118 131 6 10 chr5 32627985 32628298 -170457234 - AluSx SINE Alu 0 312 1 2085 141 0 3 chr5 32629724 32630022 -170455510 - AluSx SINE Alu -2 310 14 261 222 44 11 chr5 32630022 32630112 -170455420 + (TA)n Simple_repeat Simple_repeat 2 94 0 263 311 58 0 chr5 32630541 32630644 -170454888 + L3b LINE CR1 1143 1251 -332 279 0 0 0 chr5 32631159 32631190 -170454342 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 108 0 0 chr5 32631677 32631714 -170453818 + (A)n Simple_repeat Simple_repeat 1 37 0 864 308 44 15 chr5 32632049 32632461 -170453071 - L1MC4a LINE L1 -1913 5895 5472 1101 326 106 36 chr5 32632624 32633287 -170452245 + L2 LINE L2 2267 2975 -339 243 273 39 39 chr5 32633426 32633503 -170452029 + L2 LINE L2 3169 3245 -27 235 276 130 55 chr5 32633504 32633758 -170451774 - L1MC4a LINE L1 -1311 4835 4563 478 258 61 49 chr5 32633853 32633988 -170451544 - L1MC5 LINE L1 -36 7925 7793 1951 162 10 0 chr5 32633988 32634291 -170451241 - AluJb SINE Alu -6 306 1 478 258 61 49 chr5 32634291 32634389 -170451143 - L1MC5 LINE L1 -168 7793 7686 2054 89 6 85 chr5 32634389 32634705 -170450827 + AluSg SINE Alu 1 291 -19 478 258 61 49 chr5 32634705 32634734 -170450798 - L1MC5 LINE L1 -275 7686 7659 21 0 0 0 chr5 32634810 32634831 -170450701 + AT_rich Low_complexity Low_complexity 1 21 0 2278 105 3 10 chr5 32634832 32635137 -170450395 - AluSx SINE Alu -9 303 1 368 233 67 60 chr5 32635195 32635345 -170450187 - L1 LINE L1 -1731 4415 4265 227 98 73 0 chr5 32635734 32635775 -170449757 - MLT1B-int LTR MaLR -973 398 355 977 158 395 12 chr5 32635825 32636076 -170449456 - MLT1B-int LTR MaLR -1172 199 1 1302 201 105 30 chr5 32636076 32636439 -170449093 - MLT1B LTR MaLR 0 390 1 1008 247 53 19 chr5 32636455 32636775 -170448757 - MER46C DNA MER2_type -6 332 2 1091 162 0 32 chr5 32637519 32637704 -170447828 - AluSq SINE Alu -1 312 134 228 35 0 0 chr5 32637704 32637733 -170447799 + (TG)n Simple_repeat Simple_repeat 2 30 0 418 230 19 19 chr5 32637735 32637842 -170447690 - L1MC4 LINE L1 -1339 6983 1977 977 106 8 0 chr5 32637842 32637974 -170447558 - AluSq SINE Alu -179 133 1 958 239 138 52 chr5 32638886 32639350 -170446182 - MLT1D LTR MaLR -1 504 1 189 74 0 0 chr5 32639367 32639394 -170446138 + (ATG)n Simple_repeat Simple_repeat 1 27 0 4528 139 239 92 chr5 32639501 32640980 -170444552 - pTR5 LTR ERV1 0 2438 743 2435 96 0 0 chr5 32641693 32641994 -170443538 - AluSg SINE Alu -9 301 1 383 324 35 18 chr5 32642240 32642425 -170443107 + MIR SINE MIR 30 212 -50 2198 106 33 3 chr5 32642573 32642874 -170442658 + AluSx SINE Alu 1 310 -2 184 30 61 0 chr5 32643230 32643263 -170442269 + T-rich Low_complexity Low_complexity 2 36 0 465 28 0 83 chr5 32643264 32643298 -170442234 - MER41B LTR ERV1 -90 545 518 2402 107 0 0 chr5 32643298 32643607 -170441925 + AluSx SINE Alu 1 309 -3 465 28 0 83 chr5 32643607 32643644 -170441888 - MER41B LTR ERV1 -117 518 480 819 242 51 57 chr5 32643749 32644084 -170441448 + MER96B DNA MER1_type? 49 381 -36 234 91 0 0 chr5 32644669 32644702 -170440830 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 1641 145 30 34 chr5 32644760 32645057 -170440475 - AluJo SINE Alu -16 296 1 398 226 49 85 chr5 32645581 32645636 -170439896 - L1ME4a LINE L1 -4 6117 6062 2313 119 0 0 chr5 32645636 32645946 -170439586 + AluSx SINE Alu 1 310 -2 398 226 49 85 chr5 32645946 32646054 -170439478 - L1ME4a LINE L1 -59 6062 5960 2210 84 14 20 chr5 32646330 32646648 -170438884 - AluSc SINE Alu 0 309 1 2581 45 3 10 chr5 32646758 32647067 -170438465 + AluY SINE Alu 1 307 -4 535 262 41 77 chr5 32647081 32647302 -170438230 - MIR SINE MIR -21 241 29 197 314 57 138 chr5 32647487 32647783 -170437749 - L2 LINE L2 -1 3271 3000 927 110 0 0 chr5 32647909 32648027 -170437505 + AluJb SINE Alu 1 118 -194 1421 121 138 104 chr5 32648036 32648334 -170437198 - AluSg SINE Alu -2 308 1 265 359 8 26 chr5 32649029 32649146 -170436386 - MIR SINE MIR -85 177 63 440 272 9 9 chr5 32649189 32649303 -170436229 - MER81 DNA DNA 0 114 1 201 314 0 0 chr5 32649550 32649601 -170435931 + L2 LINE L2 3262 3312 -1 1697 175 21 7 chr5 32649651 32649937 -170435595 - AluSx SINE Alu -22 290 1 329 333 115 16 chr5 32650627 32650810 -170434722 - MIR SINE MIR -15 247 47 190 213 0 64 chr5 32650849 32650896 -170434636 - MIR3 SINE MIR -34 174 131 3476 55 7 0 chr5 32651660 32652097 -170433435 + L1PA8 LINE L1 5732 6171 -1 464 86 14 0 chr5 32652358 32652428 -170433104 + (TC)n Simple_repeat Simple_repeat 1 71 0 1769 199 24 0 chr5 32652460 32652757 -170432775 - AluJb SINE Alu -8 304 1 326 316 80 38 chr5 32652760 32653048 -170432484 - L1ME4a LINE L1 -117 6004 5705 2170 128 0 0 chr5 32653323 32653611 -170431921 + AluSx SINE Alu 1 288 -24 276 53 0 0 chr5 32653620 32653658 -170431874 + (CA)n Simple_repeat Simple_repeat 2 39 0 185 304 152 0 chr5 32653904 32653983 -170431549 - MIR SINE MIR -6 256 166 2151 116 0 7 chr5 32654198 32654492 -170431040 + AluSx SINE Alu 1 292 -20 479 268 31 16 chr5 32654494 32654621 -170430911 + L2 LINE L2 3185 3313 0 2411 89 0 0 chr5 32654994 32655285 -170430247 + AluSc SINE Alu 1 291 -18 1041 208 78 93 chr5 32655321 32655478 -170430054 + MLT1B LTR MaLR 1 159 -269 2118 43 0 4 chr5 32655478 32655722 -170429810 + L1PA5 LINE L1 5893 6137 -17 192 111 0 0 chr5 32655722 32655758 -170429774 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2118 43 0 4 chr5 32655758 32655769 -170429763 + L1PA5 LINE L1 6137 6147 -7 1041 208 78 93 chr5 32655769 32656004 -170429528 + MLT1B LTR MaLR 159 428 0 1871 146 17 3 chr5 32656061 32656348 -170429184 - AluJo SINE Alu -21 291 1 293 270 157 0 chr5 32657033 32657122 -170428410 - MER91C DNA MER1_type -2 138 36 2426 97 0 0 chr5 32657297 32657606 -170427926 - AluSg SINE Alu -1 309 1 1608 150 26 11 chr5 32657657 32657924 -170427608 + AluJo SINE Alu 33 303 -9 2325 105 0 0 chr5 32658094 32658388 -170427144 + AluSx SINE Alu 1 294 -18 660 254 35 69 chr5 32658831 32658956 -170426576 + MIR SINE MIR 22 137 -125 2353 97 7 0 chr5 32658956 32659254 -170426278 + AluSq SINE Alu 1 300 -13 660 254 35 69 chr5 32659254 32659360 -170426172 + MIR SINE MIR 137 245 -17 383 243 59 66 chr5 32659968 32660120 -170425412 + MIR3 SINE MIR 4 154 -54 585 252 78 139 chr5 32660605 32661160 -170424372 - MLT1H1 LTR MaLR -2 553 33 285 293 146 0 chr5 32661404 32661527 -170424005 + MER117 DNA MER1_type 27 167 -30 1068 170 55 0 chr5 32661879 32662079 -170423453 + MSTB1 LTR MaLR 1 211 -221 1370 117 6 0 chr5 32662079 32662259 -170423273 - AluSx SINE Alu -131 181 1 1084 134 6 0 chr5 32662260 32662431 -170423101 + MSTB1 LTR MaLR 259 430 -2 2413 94 0 3 chr5 32663189 32663498 -170422034 + AluY SINE Alu 1 308 -3 2131 178 43 84 chr5 32664665 32664932 -170420600 - MER74A LTR ERVL 0 558 281 2203 122 0 0 chr5 32664932 32665235 -170420297 + AluSx SINE Alu 1 303 -9 2131 178 43 84 chr5 32665235 32665547 -170419985 - MER74A LTR ERVL -277 281 3 205 288 27 41 chr5 32665740 32665813 -170419719 - L2 LINE L2 -89 3183 3112 2155 138 7 54 chr5 32666829 32667105 -170418427 - MLT1B LTR MaLR -4 386 133 2266 115 3 0 chr5 32667105 32667409 -170418123 - AluY SINE Alu -6 305 1 2155 138 7 54 chr5 32667409 32667537 -170417995 - MLT1B LTR MaLR -257 133 1 262 343 46 0 chr5 32668168 32668276 -170417256 - L2 LINE L2 -2 3270 3158 301 240 13 0 chr5 32668278 32668353 -170417179 - LTR67 LTR ERVL -2 555 480 235 208 28 28 chr5 32668568 32668640 -170416892 - MLT1J LTR MaLR -330 181 110 * 606 258 36 18 chr5 32668581 32668748 -170416784 - LTR67 LTR ERVL -385 172 3 3462 130 36 34 chr5 32668853 32669492 -170416040 - MER39B LTR ERV1 -13 640 1 249 169 13 78 chr5 32669518 32669595 -170415937 - L2 LINE L2 -207 3065 2994 189 0 0 0 chr5 32669926 32669947 -170415585 + (T)n Simple_repeat Simple_repeat 1 21 0 598 276 232 28 chr5 32670287 32670795 -170414737 + L2 LINE L2 2366 2977 -337 2247 108 6 16 chr5 32671084 32671399 -170414133 - AluSx SINE Alu 0 312 1 2385 77 0 0 chr5 32672012 32672330 -170413202 - AluSq SINE Alu 0 318 1 2565 72 3 0 chr5 32672733 32673038 -170412494 + AluSp SINE Alu 1 306 -7 2342 103 0 22 chr5 32673460 32673771 -170411761 + AluSp SINE Alu 1 304 -9 330 287 96 30 chr5 32674419 32674586 -170410946 + MIR3 SINE MIR 4 181 -27 2248 116 0 0 chr5 32674659 32674951 -170410581 + AluSq SINE Alu 1 292 -21 2316 150 57 15 chr5 32675218 32675625 -170409907 - MSTA LTR MaLR 0 428 5 2280 74 30 10 chr5 32675837 32676134 -170409398 + AluSq SINE Alu 1 303 -10 2379 76 3 7 chr5 32676134 32676437 -170409095 + AluY SINE Alu 1 302 -9 627 172 73 104 chr5 32676530 32676722 -170408810 - MER20 DNA MER1_type -14 205 20 874 139 7 40 chr5 32677260 32677433 -170408099 - AluSg/x SINE Alu 0 302 135 2467 74 23 0 chr5 32677515 32677814 -170407718 - AluSq SINE Alu -7 306 1 398 336 32 23 chr5 32677827 32678002 -170407530 - MIR SINE MIR -63 145 16 2248 103 0 0 chr5 32678231 32678545 -170406987 - AluSx SINE Alu 0 314 1 464 0 18 0 chr5 32678972 32679028 -170406504 + (TG)n Simple_repeat Simple_repeat 2 58 0 2437 176 55 61 chr5 32679744 32680362 -170405170 - L1MB5 LINE L1 0 6174 5556 443 358 16 21 chr5 32680398 32680585 -170404947 - L3 LINE CR1 -2 1575 1390 2302 121 0 0 chr5 32681141 32681446 -170404086 - AluSx SINE Alu -7 305 1 266 122 20 0 chr5 32681465 32681514 -170404018 - L1ME3A LINE L1 -5 6165 6116 * 621 229 51 11 chr5 32681495 32681670 -170403862 + L1ME3A LINE L1 5878 6059 -111 629 293 167 4 chr5 32681842 32682112 -170403420 + MLT1K LTR MaLR 82 395 -193 3673 189 50 50 chr5 32682198 32682730 -170402802 - MER21B LTR ERV1 -14 849 315 2315 111 3 0 chr5 32682730 32683036 -170402496 - AluSx SINE Alu -5 307 1 3673 189 50 50 chr5 32683036 32683352 -170402180 - MER21B LTR ERV1 -547 316 1 1149 79 0 7 chr5 32683934 32684074 -170401458 + AluSq/x SINE Alu 1 139 -174 2344 96 0 3 chr5 32684084 32684387 -170401145 + AluSc SINE Alu 3 304 -5 2481 130 61 30 chr5 32685126 32685533 -170399999 + MSTB LTR MaLR 5 424 -2 2650 46 7 0 chr5 32685597 32685903 -170399629 - AluY SINE Alu -3 308 1 607 279 34 17 chr5 32686239 32686418 -170399114 - MIR SINE MIR 0 262 81 231 36 0 0 chr5 32687144 32687172 -170398360 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 2276 108 0 0 chr5 32687322 32687617 -170397915 - AluSx SINE Alu -17 295 1 451 301 72 28 chr5 32687633 32687957 -170397575 + L1ME4a LINE L1 5543 5886 -235 8214 113 22 17 chr5 32687957 32688662 -170396870 - HSMAR2 DNA Mariner -1 1301 586 2631 57 0 16 chr5 32688662 32688978 -170396554 + AluY SINE Alu 1 311 0 8214 113 22 17 chr5 32688978 32689567 -170395965 - HSMAR2 DNA Mariner -716 586 1 451 301 72 28 chr5 32689567 32689601 -170395931 + L1ME4a LINE L1 5886 5917 -204 252 0 0 0 chr5 32689616 32689644 -170395888 + (CA)n Simple_repeat Simple_repeat 2 29 0 334 253 40 10 chr5 32689678 32689777 -170395755 + HAL1b LINE L1 1243 1344 -4 21 0 0 0 chr5 32689783 32689804 -170395728 + AT_rich Low_complexity Low_complexity 1 21 0 256 245 104 28 chr5 32689952 32690058 -170395474 + MIR SINE MIR 19 132 -130 514 262 33 86 chr5 32691006 32691250 -170394282 + MIR SINE MIR 11 241 -21 1875 134 62 7 chr5 32691595 32691885 -170393647 - AluJb SINE Alu -6 306 1 208 294 0 0 chr5 32692099 32692150 -170393382 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 2336 70 0 11 chr5 32693216 32693540 -170391992 + AluY SINE Alu 1 321 0 300 295 70 23 chr5 32693621 32693750 -170391782 - L1ME4a LINE L1 -3 6118 5984 456 220 0 11 chr5 32693782 32693873 -170391659 + L2 LINE L2 3224 3313 0 363 304 51 0 chr5 32694759 32694897 -170390635 + MER117 DNA MER1_type 53 197 0 1129 191 29 100 chr5 32695199 32695322 -170390210 - MER39 LTR ERV1 -3 704 574 2223 93 7 7 chr5 32695322 32695612 -170389920 + AluSg SINE Alu 2 291 -19 1129 191 29 100 chr5 32695612 32695865 -170389667 - MER39 LTR ERV1 -133 574 161 399 217 85 47 chr5 32696707 32696836 -170388696 + MIR SINE MIR 16 149 -59 2398 91 0 0 chr5 32697850 32698148 -170387384 - AluSg SINE Alu -12 298 1 795 261 111 110 chr5 32698805 32699387 -170386145 - L2 LINE L2 -1 3312 2711 2217 114 7 0 chr5 32699387 32699684 -170385848 + AluSq SINE Alu 1 299 -14 795 261 111 110 chr5 32699684 32699974 -170385558 - L2 LINE L2 -602 2711 2423 1724 154 0 97 chr5 32700496 32700693 -170384839 - AluJo SINE Alu -7 305 151 2267 117 3 0 chr5 32700693 32701002 -170384530 + AluSq SINE Alu 1 310 -3 1724 154 0 97 chr5 32701002 32701135 -170384397 - AluJo SINE Alu -161 151 7 188 311 16 0 chr5 32701391 32701452 -170384080 + L2 LINE L2 3247 3308 -5 1590 142 13 4 chr5 32701800 32702064 -170383468 + AluSx SINE Alu 54 319 0 259 272 22 11 chr5 32702089 32702181 -170383351 - Charlie8 DNA MER1_type -2238 179 87 393 383 6 23 chr5 32703085 32703260 -170382272 + MIR3 SINE MIR 14 185 -23 216 340 0 0 chr5 32704754 32704807 -170380725 + L2 LINE L2 3162 3214 -58 1821 172 3 16 chr5 32705428 32705736 -170379796 + AluJo SINE Alu 1 304 -8 2386 80 0 3 chr5 32705736 32706035 -170379497 + AluY SINE Alu 1 298 -13 225 333 123 0 chr5 32706588 32706702 -170378830 + L2 LINE L2 3145 3272 0 2196 92 23 33 chr5 32707968 32708272 -170377260 - AluSx SINE Alu -11 301 1 183 273 146 0 chr5 32708674 32708729 -170376803 - L2 LINE L2 -37 3276 3214 326 250 111 9 chr5 32708957 32709065 -170376467 + L2 LINE L2 3189 3307 -6 2055 150 3 6 chr5 32709067 32709380 -170376152 + AluSx SINE Alu 1 312 0 2498 121 68 34 chr5 32709932 32710006 -170375526 - MSTA LTR MaLR 0 428 358 2242 125 0 0 chr5 32710006 32710303 -170375229 + AluSx SINE Alu 1 297 -15 2498 121 68 34 chr5 32710303 32710642 -170374890 - MSTA LTR MaLR -70 358 1 1112 436 21 14 chr5 32710700 32711008 -170374524 - AluSp SINE Alu 0 311 2 510 261 56 0 chr5 32712030 32712191 -170373341 + L1M3d LINE L1 3 172 -5719 21 0 0 0 chr5 32712289 32712310 -170373222 + AT_rich Low_complexity Low_complexity 1 21 0 2240 123 0 0 chr5 32713240 32713541 -170371991 + AluSx SINE Alu 1 301 -11 1980 157 0 26 chr5 32714334 32714646 -170370886 + AluJb SINE Alu 1 304 -8 1718 171 0 38 chr5 32714821 32715136 -170370396 - AluJb SINE Alu -9 303 1 2147 98 17 7 chr5 32715177 32715472 -170370060 - AluSq SINE Alu -15 298 1 2295 99 0 10 chr5 32715472 32715776 -170369756 - AluSx SINE Alu -11 301 1 181 242 22 77 chr5 32716002 32716093 -170369439 + MER5C DNA MER1_type 174 259 -65 2344 101 3 3 chr5 32716805 32717103 -170368429 + AluSg SINE Alu 1 298 -12 269 290 140 11 chr5 32720254 32720347 -170365185 + MIR3 SINE MIR 58 162 -46 2874 138 74 8 chr5 32720500 32721014 -170364518 + LTR10A LTR ERV1 8 555 -54 1854 149 3 40 chr5 32721803 32722099 -170363433 + AluSx SINE Alu 4 288 -24 401 290 85 25 chr5 32722158 32722349 -170363183 + MIR SINE MIR 6 215 -47 332 259 104 94 chr5 32722808 32722875 -170362657 - L1ME4a LINE L1 -11 6110 6045 2220 115 0 16 chr5 32722875 32723187 -170362345 + AluSq SINE Alu 1 307 -6 332 259 104 94 chr5 32723187 32723320 -170362212 - L1ME4a LINE L1 -76 6045 5908 712 232 57 31 chr5 32723323 32723517 -170362015 + MER63A DNA MER1_type 4 202 -8 378 0 0 0 chr5 32724108 32724150 -170361382 + (TG)n Simple_repeat Simple_repeat 2 43 0 321 284 25 90 chr5 32725128 32725329 -170360203 + L2 LINE L2 2457 2644 -670 858 107 23 46 chr5 32725388 32725400 -170360132 - AluSg SINE Alu -182 128 117 402 21 0 0 chr5 32725400 32725447 -170360085 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 858 107 23 46 chr5 32725447 32725565 -170359967 - AluSg SINE Alu -193 117 1 362 0 20 20 chr5 32725565 32725615 -170359917 + (TTTA)n Simple_repeat Simple_repeat 2 124 0 1691 136 0 45 chr5 32725615 32725880 -170359652 - AluSx SINE Alu -29 283 31 5104 131 132 99 chr5 32725880 32727698 -170357834 + pTR5 LTR ERV1 743 2438 0 266 88 0 0 chr5 32727701 32727735 -170357797 - AluSx SINE Alu -265 34 1 2447 40 7 0 chr5 32728325 32728624 -170356908 - AluY SINE Alu -10 301 1 266 354 53 35 chr5 32728628 32728741 -170356791 + L2 LINE L2 3154 3268 -4 403 269 86 30 chr5 32729784 32729981 -170355551 - MLT1L LTR MaLR -234 381 174 2179 122 0 0 chr5 32730083 32730394 -170355138 + AluSx SINE Alu 1 311 -1 754 119 23 160 chr5 32731139 32731358 -170354174 - MER53 DNA DNA 0 189 1 304 250 50 100 chr5 32731474 32731654 -170353878 + MER5A DNA MER1_type 18 188 -1 2191 111 0 0 chr5 32731659 32731965 -170353567 - AluSx SINE Alu -6 306 1 234 94 0 0 chr5 32732087 32732119 -170353413 + L2 LINE L2 3282 3313 0 2344 75 0 0 chr5 32733578 32733870 -170351662 + AluSg SINE Alu 1 292 -18 329 224 20 61 chr5 32734304 32734402 -170351130 - L1MC4 LINE L1 -1339 6703 6610 1667 164 0 7 chr5 32734406 32734692 -170350840 - AluJo SINE Alu -28 284 1 555 207 95 0 chr5 32735634 32735750 -170349782 - MIR3 SINE MIR -16 192 66 325 253 13 13 chr5 32736633 32736712 -170348820 + MIR3 SINE MIR 121 199 -9 2200 105 0 0 chr5 32737040 32737335 -170348197 + AluSq SINE Alu 1 295 -18 2189 57 7 4 chr5 32737335 32737644 -170347888 + AluY SINE Alu 1 310 0 506 236 117 32 chr5 32737966 32738366 -170347166 - MLT1J LTR MaLR -4 507 1 1970 107 38 0 chr5 32738596 32738885 -170346647 + AluSq SINE Alu 1 300 -13 1970 78 37 7 chr5 32739058 32739348 -170346184 - AluSc SINE Alu 0 298 1 2436 72 0 0 chr5 32739641 32739947 -170345585 - AluY SINE Alu -5 306 1 2367 69 3 16 chr5 32740258 32740575 -170344957 + AluSp SINE Alu 1 313 0 308 257 0 14 chr5 32740962 32741036 -170344496 - MLT1J LTR MaLR -324 187 115 420 260 10 106 chr5 32741240 32741367 -170344165 + MIR SINE MIR 3 100 -162 1971 126 7 3 chr5 32741367 32741668 -170343864 - AluSx SINE Alu -10 302 1 420 260 10 106 chr5 32741668 32741773 -170343759 + MIR SINE MIR 100 213 -49 29 0 0 0 chr5 32741773 32741802 -170343730 + AT_rich Low_complexity Low_complexity 1 29 0 2029 87 3 11 chr5 32741802 32742089 -170343443 - AluSx SINE Alu -27 285 1 184 294 20 0 chr5 32742101 32742152 -170343380 + MIR SINE MIR 211 262 0 557 255 50 6 chr5 32742261 32742422 -170343110 + L2 LINE L2 2849 3016 -297 1988 105 11 3 chr5 32742475 32742761 -170342771 + AluSx SINE Alu 1 288 -24 367 242 248 38 chr5 32743152 32743309 -170342223 + L2 LINE L2 3124 3313 0 2177 81 0 31 chr5 32743336 32743657 -170341875 - AluY SINE Alu 0 311 1 238 83 0 0 chr5 32743690 32743726 -170341806 - L1MA3 LINE L1 0 6305 6270 704 188 12 69 chr5 32744089 32744249 -170341283 - MER106B DNA MER1_type -908 151 1 397 286 97 7 chr5 32745599 32745753 -170339779 + L2 LINE L2 3145 3312 -1 2312 58 0 49 chr5 32745866 32746193 -170339339 - AluY SINE Alu 0 311 1 213 303 15 0 chr5 32746302 32746368 -170339164 - L2 LINE L2 -21 3251 3185 244 121 0 0 chr5 32746369 32746402 -170339130 + Alu SINE Alu 83 115 -188 1257 90 0 0 chr5 32746416 32746583 -170338949 - AluSg SINE Alu -143 167 1 200 250 0 21 chr5 32746967 32747015 -170338517 - L2 LINE L2 -8 3264 3218 187 344 31 42 chr5 32747119 32747215 -170338317 - L2 LINE L2 -191 3081 2987 3038 177 62 7 chr5 32749095 32749660 -170335872 - MER77 LTR ERV1 -9 596 1 700 285 75 11 chr5 32749803 32750070 -170335462 - LTR33 LTR ERVL -237 284 1 486 278 117 29 chr5 32750549 32750754 -170334778 + MIR SINE MIR 13 235 -27 233 288 38 12 chr5 32751071 32751151 -170334381 + MIR SINE MIR 20 101 -107 220 292 45 11 chr5 32751269 32751358 -170334174 - MIR SINE MIR -86 122 31 2051 198 47 72 chr5 32751533 32751591 -170333941 - MER74B LTR ERVL 0 622 564 2461 53 0 0 chr5 32751591 32751894 -170333638 + AluY SINE Alu 1 303 -8 2051 198 47 72 chr5 32751894 32752035 -170333497 - MER74B LTR ERVL -58 564 421 1455 184 0 24 chr5 32752035 32752351 -170333181 - AluJo SINE Alu 0 313 5 2051 198 47 72 chr5 32752351 32752710 -170332822 - MER74B LTR ERVL -201 421 74 1732 145 16 39 chr5 32752710 32753021 -170332511 + AluJo SINE Alu 5 308 -4 364 267 38 29 chr5 32753495 32753600 -170331932 - MIR SINE MIR -153 109 4 1683 141 0 42 chr5 32753864 32754177 -170331355 + AluSx SINE Alu 1 300 -12 1844 174 140 17 chr5 32754635 32755049 -170330483 + MLT1C LTR MaLR 1 465 -2 2312 97 0 3 chr5 32755889 32756197 -170329335 - AluSq SINE Alu -6 307 1 220 294 59 24 chr5 32756333 32756418 -170329114 + MIR SINE MIR 156 243 -19 317 363 44 25 chr5 32757472 32757632 -170327900 - MIR3 SINE MIR -27 181 19 2149 101 3 10 chr5 32757656 32757962 -170327570 + AluSx SINE Alu 1 304 -8 2256 73 0 10 chr5 32759225 32759526 -170326006 - AluY SINE Alu -13 298 1 1354 139 33 37 chr5 32759937 32760210 -170325322 - AluSx SINE Alu -23 289 18 2082 113 0 0 chr5 32760632 32760963 -170324569 + AluSx SINE Alu 1 331 0 506 279 8 0 chr5 32761226 32761355 -170324177 + Charlie7 DNA MER1_type 116 245 -2367 813 183 0 0 chr5 32761396 32761527 -170324005 - AluJo SINE Alu -45 267 137 2070 245 84 52 chr5 32761559 32761669 -170323863 + Charlie7 DNA MER1_type 307 412 -2200 718 176 0 22 chr5 32761669 32761805 -170323727 - AluJo SINE Alu -169 133 1 2070 245 84 52 chr5 32761805 32762093 -170323439 + Charlie7 DNA MER1_type 412 689 -1923 2501 55 0 0 chr5 32762093 32762400 -170323132 + AluY SINE Alu 1 307 -4 2070 245 84 52 chr5 32762400 32762811 -170322721 + Charlie7 DNA MER1_type 689 1143 -1469 772 154 0 0 chr5 32762811 32762928 -170322604 + AluJb SINE Alu 2 118 -194 22 35 0 0 chr5 32762941 32762970 -170322562 + AT_rich Low_complexity Low_complexity 1 29 0 2202 228 94 75 chr5 32762973 32763193 -170322339 + Charlie7 DNA MER1_type 1128 1343 -1269 5014 131 65 43 chr5 32763193 32763476 -170322056 - MER4D LTR ERV1 0 903 628 1864 126 24 0 chr5 32763476 32763769 -170321763 + AluSx SINE Alu 12 311 -1 5014 131 65 43 chr5 32763769 32763885 -170321647 - MER4D LTR ERV1 -275 628 516 2177 118 0 6 chr5 32763885 32764198 -170321334 + AluSq SINE Alu 1 311 -2 5014 131 65 43 chr5 32764198 32764681 -170320851 - MER4D LTR ERV1 -387 516 1 2202 228 94 75 chr5 32764681 32764931 -170320601 + Charlie7 DNA MER1_type 1343 1587 -1025 2482 54 0 0 chr5 32764931 32765227 -170320305 + AluY SINE Alu 1 296 -15 2202 228 94 75 chr5 32765227 32765826 -170319706 + Charlie7 DNA MER1_type 1587 2174 -438 2367 60 0 10 chr5 32765826 32766127 -170319405 + AluY SINE Alu 1 298 -13 2202 228 94 75 chr5 32766127 32766138 -170319394 + Charlie7 DNA MER1_type 2174 2183 -429 1983 130 3 0 chr5 32766138 32766430 -170319102 + AluSx SINE Alu 3 295 -17 2202 228 94 75 chr5 32766430 32766553 -170318979 + Charlie7 DNA MER1_type 2183 2356 -256 204 97 0 0 chr5 32766570 32766601 -170318931 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1855 150 0 0 chr5 32766601 32766888 -170318644 - AluSx SINE Alu -25 287 1 1848 154 0 7 chr5 32766890 32767196 -170318336 - AluJb SINE Alu -8 304 1 730 284 52 55 chr5 32768064 32768299 -170317233 - L1MC4a LINE L1 -1876 5932 5697 2147 123 0 0 chr5 32768299 32768601 -170316931 + AluSx SINE Alu 1 302 -10 730 284 52 55 chr5 32768601 32768805 -170316727 - L1MC4a LINE L1 -2111 5697 5494 1987 148 75 0 chr5 32768995 32769327 -170316205 - LTR45B LTR ERV1 -131 358 2 31 26 0 0 chr5 32769452 32769490 -170316042 + AT_rich Low_complexity Low_complexity 1 38 0 549 31 0 0 chr5 32769490 32769554 -170315978 - U6 snRNA snRNA -31 76 13 322 228 186 80 chr5 32769603 32769915 -170315617 - L1ME LINE L1 -467 5654 5310 33 25 0 0 chr5 32770154 32770194 -170315338 + AT_rich Low_complexity Low_complexity 1 40 0 2343 76 0 0 chr5 32770312 32770603 -170314929 - AluSc SINE Alu -18 291 1 4032 67 13 4 chr5 32770607 32771142 -170314390 - L1PA8 LINE L1 -4 6168 5629 1073 137 33 11 chr5 32771193 32771375 -170314157 - AluJb SINE Alu -7 305 120 252 0 0 0 chr5 32772077 32772105 -170313427 + (A)n Simple_repeat Simple_repeat 1 28 0 1873 127 3 13 chr5 32772118 32772417 -170313115 + AluSg SINE Alu 12 307 -3 551 230 26 0 chr5 32772518 32772631 -170312901 + MLT1E3 LTR MaLR 317 432 -192 2060 187 104 6 chr5 32772631 32773101 -170312431 - MER34 LTR ERV1 0 542 27 651 185 196 35 chr5 32773106 32773279 -170312253 + MLT1E3 LTR MaLR 424 624 0 599 184 0 0 chr5 32773502 32773605 -170311927 + U13 snRNA snRNA 1 103 -1 234 196 22 0 chr5 32773651 32773697 -170311835 + MIR SINE MIR 103 149 -113 344 253 22 0 chr5 32773779 32773870 -170311662 + MIR SINE MIR 164 256 -6 211 352 11 0 chr5 32774679 32774767 -170310765 - MIR SINE MIR 0 262 174 2189 104 0 10 chr5 32775311 32775610 -170309922 + AluSx SINE Alu 1 296 -16 523 267 95 25 chr5 32775704 32775888 -170309644 - MIR SINE MIR -68 140 2 274 333 34 8 chr5 32776111 32776228 -170309304 - L2 LINE L2 0 3313 3194 2250 113 3 0 chr5 32776331 32776642 -170308890 + AluSx SINE Alu 1 312 0 3339 196 104 6 chr5 32776645 32777411 -170308121 - L1MB8 LINE L1 0 6178 5316 1417 194 3 45 chr5 32777411 32777721 -170307811 - AluJo SINE Alu -15 297 1 3339 196 104 6 chr5 32777721 32777831 -170307701 - L1MB8 LINE L1 -862 5316 5218 931 265 31 14 chr5 32777828 32778051 -170307481 - L1M4 LINE L1 -6039 503 277 * 544 209 0 0 chr5 32778053 32778163 -170307369 - L1M4 LINE L1 -6409 133 24 287 313 78 39 chr5 32778193 32778254 -170307278 - L1ME3A LINE L1 -5 6165 6108 1843 116 46 3 chr5 32778254 32778538 -170306994 - AluSx SINE Alu -16 296 1 287 313 78 39 chr5 32778538 32778655 -170306877 - L1ME3A LINE L1 -62 6108 5980 1905 141 20 3 chr5 32778692 32778990 -170306542 + AluSx SINE Alu 1 303 -9 2408 42 0 36 chr5 32779090 32779397 -170306135 - AluY SINE Alu -15 296 1 22 56 0 0 chr5 32779421 32779457 -170306075 + AT_rich Low_complexity Low_complexity 1 36 0 1013 76 8 0 chr5 32780123 32780255 -170305277 + AluSc SINE Alu 1 133 -176 2269 78 7 13 chr5 32780255 32780388 -170305144 + AluSc SINE Alu 1 133 -176 2336 77 0 3 chr5 32780388 32780686 -170304846 + AluSc SINE Alu 1 297 -12 2269 78 7 13 chr5 32780686 32780859 -170304673 + AluSc SINE Alu 133 305 -4 820 148 0 0 chr5 32780973 32781101 -170304431 - FLAM_C SINE Alu -2 141 14 1204 200 17 4 chr5 32781106 32781336 -170304196 + L1MB3 LINE L1 5912 6144 -39 533 122 0 0 chr5 32781360 32781434 -170304098 + U6 snRNA snRNA 1 74 -33 2101 93 0 3 chr5 32781454 32781745 -170303787 + AluSx SINE Alu 1 290 -22 319 73 0 0 chr5 32781745 32781791 -170303741 + L1MB4 LINE L1 6131 6179 -1 1851 168 3 0 chr5 32782108 32782417 -170303115 + AluJb SINE Alu 1 310 -2 581 105 0 0 chr5 32782417 32782493 -170303039 - AluY SINE Alu -223 88 13 649 117 0 0 chr5 32782493 32782587 -170302945 + AluSg/x SINE Alu 217 310 0 1468 66 0 0 chr5 32783629 32783810 -170301722 + L1PA5 LINE L1 5966 6146 -8 189 132 0 0 chr5 32783810 32783848 -170301684 + (TA)n Simple_repeat Simple_repeat 1 38 0 2143 95 10 0 chr5 32784259 32784553 -170300979 + AluSq SINE Alu 1 297 -16 270 290 48 0 chr5 32784721 32784783 -170300749 + L2 LINE L2 3202 3266 -6 1932 127 13 20 chr5 32785151 32785451 -170300081 - AluSx SINE Alu -14 298 1 1913 130 10 10 chr5 32785660 32785998 -170299534 + AluSx SINE Alu 1 312 0 215 360 64 0 chr5 32786151 32786276 -170299256 - MIR3 SINE MIR -38 170 38 2108 111 0 7 chr5 32786364 32786661 -170298871 + AluSx SINE Alu 1 295 -17 833 192 0 29 chr5 32786661 32786833 -170298699 + AluJb SINE Alu 134 300 -12 30 0 0 0 chr5 32786962 32786992 -170298540 + AT_rich Low_complexity Low_complexity 1 30 0 1778 128 0 0 chr5 32787027 32787278 -170298254 - AluSq SINE Alu -58 255 5 230 260 0 52 chr5 32788499 32788595 -170296937 - AluYb8 SINE Alu -96 212 122 22 0 0 0 chr5 32790596 32790618 -170294914 + AT_rich Low_complexity Low_complexity 1 22 0 331 202 4 130 chr5 32791060 32791313 -170294219 - AluSg SINE Alu -19 281 61 855 142 32 53 chr5 32791702 32791892 -170293640 + MER53 DNA DNA 3 188 -1 1828 113 28 7 chr5 32792149 32792182 -170293350 - AluSg SINE Alu -20 290 259 207 0 0 0 chr5 32792182 32792205 -170293327 + (GGCTG)n Simple_repeat Simple_repeat 5 27 0 1828 113 28 7 chr5 32792205 32792455 -170293077 - AluSg SINE Alu -51 259 1 2268 102 3 0 chr5 32792817 32793121 -170292411 - AluSq SINE Alu -8 305 1 1664 128 17 31 chr5 32793527 32793816 -170291716 - AluSx SINE Alu -10 302 18 2082 113 0 0 chr5 32794252 32794583 -170290949 + AluSx SINE Alu 1 331 0 389 221 11 11 chr5 32795042 32795137 -170290395 - MLT1L LTR MaLR -18 597 503 475 234 40 0 chr5 32795891 32796015 -170289517 + HAL1 LINE L1 109 237 -2270 387 268 118 7 chr5 32796157 32796310 -170289222 + HAL1 LINE L1 480 649 -1858 189 284 14 27 chr5 32796399 32796473 -170289059 + MER5B DNA MER1_type 1 73 -105 264 239 0 70 chr5 32796488 32796559 -170288973 - L2 LINE L2 0 3313 3248 1065 213 71 58 chr5 32796621 32797016 -170288516 + HAL1 LINE L1 791 1190 -1317 1029 232 29 8 chr5 32797016 32797257 -170288275 - LTR8 LTR ERV1 0 691 446 1307 167 27 68 chr5 32797884 32797997 -170287535 + AluJb SINE Alu 1 117 -199 2501 113 16 11 chr5 32797997 32798368 -170287164 + THE1C LTR MaLR 1 373 -2 1307 167 27 68 chr5 32798368 32798582 -170286950 + AluJb SINE Alu 117 316 0 504 32 0 0 chr5 32798716 32798778 -170286754 + (TA)n Simple_repeat Simple_repeat 1 62 0 243 61 0 0 chr5 32799529 32799562 -170285970 + (CA)n Simple_repeat Simple_repeat 2 34 0 534 255 32 83 chr5 32799609 32799713 -170285819 + MIR SINE MIR 56 164 -98 2108 106 3 0 chr5 32799713 32800006 -170285526 + AluSc SINE Alu 1 294 -15 2263 99 0 0 chr5 32800011 32800305 -170285227 + AluSg SINE Alu 1 294 -16 534 255 32 83 chr5 32800305 32800410 -170285122 + MIR SINE MIR 168 260 -2 286 280 56 17 chr5 32800606 32800749 -170284783 - MIR SINE MIR -61 201 16 189 234 0 43 chr5 32800874 32800921 -170284611 + MIR3 SINE MIR 12 56 -152 2149 100 10 3 chr5 32801192 32801501 -170284031 - AluSq SINE Alu -2 311 1 1999 121 7 7 chr5 32801582 32801887 -170283645 - AluSx SINE Alu -7 305 1 351 208 104 10 chr5 32802882 32802978 -170282554 - MER53 DNA DNA -80 109 5 285 202 139 116 chr5 32803393 32803522 -170282010 - MER20 DNA MER1_type -87 132 1 202 393 0 11 chr5 32803598 32803687 -170281845 - MIR SINE MIR -85 123 36 575 247 68 36 chr5 32803941 32804192 -170281340 + MIR SINE MIR 1 259 -3 2272 78 0 3 chr5 32804461 32804755 -170280777 - AluSx SINE Alu -19 293 1 186 339 0 0 chr5 32804839 32804895 -170280637 - L2 LINE L2 0 3272 3217 2266 80 13 0 chr5 32806787 32807086 -170278446 + AluSx SINE Alu 1 303 -9 2294 66 0 0 chr5 32807088 32807375 -170278157 + AluY SINE Alu 1 287 -24 810 288 83 17 chr5 32807549 32807789 -170277743 + MIR SINE MIR 7 262 0 320 263 20 72 chr5 32807852 32807882 -170277650 - L1MC4 LINE L1 -1320 6722 6692 2029 108 0 0 chr5 32807882 32808159 -170277373 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr5 32808160 32808180 -170277352 + (TC)n Simple_repeat Simple_repeat 1 20 0 1101 126 0 0 chr5 32808180 32808355 -170277177 + (TA)n Simple_repeat Simple_repeat 2 176 0 320 263 20 72 chr5 32808355 32808473 -170277059 - L1MC4 LINE L1 -1348 6694 6615 * 408 253 23 0 chr5 32808397 32808484 -170277048 + L1MC4 LINE L1 6615 6703 -1339 349 258 77 0 chr5 32808486 32808594 -170276938 + L1MC4 LINE L1 6571 6652 -1133 916 295 26 49 chr5 32808857 32808952 -170276580 - L3b LINE CR1 -138 1445 1349 2197 102 0 0 chr5 32808952 32809256 -170276276 - AluY SINE Alu -7 304 1 916 295 26 49 chr5 32809256 32809509 -170276023 - L3b LINE CR1 -234 1349 1105 2039 123 0 0 chr5 32810179 32810472 -170275060 - AluSg SINE Alu -14 296 4 1947 132 0 16 chr5 32810589 32810899 -170274633 - AluSx SINE Alu 0 312 8 2154 111 0 0 chr5 32810919 32811217 -170274315 - AluSx SINE Alu -14 298 1 252 0 0 0 chr5 32815229 32815257 -170270275 + (TA)n Simple_repeat Simple_repeat 1 28 0 393 162 0 140 chr5 32815259 32815336 -170270196 - HAL1 LINE L1 -33 2474 2422 763 178 0 22 chr5 32815336 32815471 -170270061 - FLAM_C SINE Alu -1 132 1 393 162 0 140 chr5 32815471 32815529 -170270003 - HAL1 LINE L1 -85 2422 2358 755 294 68 4 chr5 32815561 32815809 -170269723 - HAL1 LINE L1 -604 1903 1640 878 245 68 45 chr5 32815810 32816120 -170269412 - HAL1 LINE L1 -900 1607 1291 2037 125 10 0 chr5 32816142 32816446 -170269086 - AluSx SINE Alu -5 307 1 1039 83 0 0 chr5 32816450 32816583 -170268949 - AluSq/x SINE Alu -179 133 1 1148 220 62 70 chr5 32816615 32816687 -170268845 - HAL1 LINE L1 -1253 1254 1183 2286 141 155 124 chr5 32816687 32817052 -170268480 + LTR8A LTR ERV1 3 355 -372 1878 131 14 0 chr5 32817052 32817335 -170268197 - AluSx SINE Alu -25 287 1 2286 141 155 124 chr5 32817335 32817672 -170267860 + LTR8A LTR ERV1 355 727 0 1148 220 62 70 chr5 32817672 32818067 -170267465 - HAL1 LINE L1 -1324 1183 791 264 239 0 70 chr5 32818129 32818200 -170267332 + L2 LINE L2 3248 3313 0 190 246 16 33 chr5 32818215 32818276 -170267256 - MER5B DNA MER1_type -105 73 14 235 231 92 110 chr5 32818394 32818567 -170266965 - HAL1 LINE L1 -1858 649 480 1999 117 3 32 chr5 32818861 32819035 -170266497 - AluSx SINE Alu -5 307 144 1914 104 3 60 chr5 32819035 32819351 -170266181 - AluSg SINE Alu -12 298 1 1999 117 3 32 chr5 32819351 32819492 -170266040 - AluSx SINE Alu -168 144 1 1235 220 124 41 chr5 32820298 32820735 -170264797 + LTR33 LTR ERVL 47 519 -2 2050 107 21 0 chr5 32820831 32821121 -170264411 - AluSq SINE Alu -17 296 1 2472 52 3 0 chr5 32821147 32821454 -170264078 - AluY SINE Alu -3 308 1 1678 161 3 10 chr5 32821607 32821906 -170263626 - AluJo SINE Alu -2 310 14 2379 65 7 0 chr5 32821929 32822238 -170263294 - AluY SINE Alu 0 311 1 1573 192 16 0 chr5 32822299 32822606 -170262926 - AluJb SINE Alu 0 312 1 214 273 36 0 chr5 32823106 32823161 -170262371 - L2 LINE L2 -1 3271 3215 274 335 99 7 chr5 32823206 32823358 -170262174 - MIR3 SINE MIR -6 202 37 213 154 0 0 chr5 32824192 32824231 -170261301 + (CGGGG)n Simple_repeat Simple_repeat 1 39 0 218 217 0 0 chr5 32824241 32824287 -170261245 - L2 LINE L2 -17 3255 3210 2140 97 0 7 chr5 32824471 32824769 -170260763 + AluSg SINE Alu 1 296 -14 278 330 18 9 chr5 32824779 32824891 -170260641 + MIR SINE MIR 81 193 -69 1979 133 0 3 chr5 32825080 32825380 -170260152 - AluSx SINE Alu -13 299 1 1438 53 5 5 chr5 32825712 32825901 -170259631 + AluY SINE Alu 123 311 0 2266 87 0 3 chr5 32826913 32827213 -170258319 + AluSx SINE Alu 1 299 -13 2079 93 17 0 chr5 32827766 32828056 -170257476 - AluSx SINE Alu -17 295 1 868 198 0 16 chr5 32828118 32828300 -170257232 - AluJ SINE Alu 0 312 134 252 0 0 0 chr5 32828450 32828478 -170257054 + (TG)n Simple_repeat Simple_repeat 2 29 0 337 191 0 0 chr5 32829007 32829075 -170256457 - MLT2B1 LTR ERVL -2 518 451 454 225 0 0 chr5 32829104 32829184 -170256348 + Tigger3(Golem) DNA MER2_type 1 80 -2949 579 188 20 0 chr5 32829302 32829403 -170256129 + Tigger3(Golem) DNA MER2_type 2935 3037 0 207 162 0 0 chr5 32829405 32829442 -170256090 + (TA)n Simple_repeat Simple_repeat 1 37 0 1675 148 4 14 chr5 32829486 32829764 -170255768 + AluJo SINE Alu 28 302 -10 344 217 0 0 chr5 32829774 32829834 -170255698 - MLT2D LTR ERVL -74 340 281 432 0 0 0 chr5 32829841 32829889 -170255643 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 832 126 0 16 chr5 32829889 32830009 -170255523 - AluJ SINE Alu -191 121 2 1653 156 48 54 chr5 32830011 32830048 -170255484 - MLT2C2 LTR ERVL -132 332 296 1967 115 18 0 chr5 32830048 32830334 -170255198 - AluSp SINE Alu -20 293 3 1653 156 48 54 chr5 32830334 32830630 -170254902 - MLT2C2 LTR ERVL -168 296 1 2099 138 0 0 chr5 32830787 32831092 -170254440 + AluSx SINE Alu 1 305 -7 2021 125 3 7 chr5 32831610 32831907 -170253625 + AluSx SINE Alu 1 296 -16 287 226 48 0 chr5 32831907 32832031 -170253501 + (TA)n Simple_repeat Simple_repeat 1 130 0 531 323 89 10 chr5 32832099 32832595 -170252937 - L1M4 LINE L1 -1305 4841 4307 1981 139 10 0 chr5 32832596 32832899 -170252633 - AluSx SINE Alu -6 306 1 458 177 194 38 chr5 32833223 32833409 -170252123 + MIR SINE MIR 48 262 0 1538 196 0 11 chr5 32833510 32833826 -170251706 - AluJb SINE Alu 0 313 1 2027 110 4 0 chr5 32833984 32834294 -170251238 - AluSq SINE Alu 0 313 3 2473 30 7 7 chr5 32834863 32835168 -170250364 - AluY SINE Alu -6 305 1 2406 66 0 0 chr5 32835412 32835716 -170249816 + AluY SINE Alu 1 304 -7 2074 90 6 35 chr5 32836218 32836529 -170249003 - AluSq SINE Alu -11 302 1 2352 80 0 3 chr5 32837095 32837406 -170248126 - AluSg SINE Alu 0 310 1 387 0 0 0 chr5 32837633 32837676 -170247856 + (TG)n Simple_repeat Simple_repeat 2 44 0 1963 109 7 30 chr5 32837681 32837983 -170247549 - AluSq SINE Alu -16 297 3 214 164 16 16 chr5 32837983 32838032 -170247500 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2019 105 3 14 chr5 32838032 32838326 -170247206 - AluSx SINE Alu -21 291 1 241 339 41 47 chr5 32838451 32838622 -170246910 - MIR SINE MIR -32 230 61 383 304 24 30 chr5 32839004 32839054 -170246478 - L2 LINE L2 -6 3307 3258 1914 133 20 3 chr5 32839054 32839356 -170246176 + AluSx SINE Alu 1 307 -5 383 304 24 30 chr5 32839356 32839473 -170246059 - L2 LINE L2 -55 3258 3141 2102 128 0 0 chr5 32839524 32839828 -170245704 - AluSx SINE Alu -8 304 1 1610 157 64 0 chr5 32839927 32840208 -170245324 - AluSx SINE Alu -13 299 1 2034 115 0 0 chr5 32840238 32840525 -170245007 + AluSx SINE Alu 1 287 -25 309 51 0 0 chr5 32840531 32840570 -170244962 + (CATA)n Simple_repeat Simple_repeat 1 39 0 203 262 0 0 chr5 32840667 32840709 -170244823 + MIR3 SINE MIR 119 160 -48 1254 142 5 0 chr5 32840900 32841097 -170244435 - AluSg/x SINE Alu -16 294 97 1022 157 0 0 chr5 32841097 32841250 -170244282 - AluSq SINE Alu -160 153 1 219 69 0 0 chr5 32841466 32841495 -170244037 + (A)n Simple_repeat Simple_repeat 1 29 0 440 295 166 0 chr5 32841697 32841938 -170243594 + L1MC4a LINE L1 5585 5865 -1943 1867 108 56 0 chr5 32842220 32842506 -170243026 - AluSq SINE Alu -11 302 1 2187 88 0 7 chr5 32843012 32843308 -170242224 - AluY SINE Alu -17 294 1 222 91 0 0 chr5 32843544 32843577 -170241955 + (CA)n Simple_repeat Simple_repeat 2 34 0 308 200 0 15 chr5 32844453 32844518 -170241014 - L1MDa LINE L1 -4036 2504 2441 1955 96 7 4 chr5 32844530 32844801 -170240731 - AluSx SINE Alu -40 272 1 1911 117 0 29 chr5 32846046 32846353 -170239179 + AluSx SINE Alu 1 298 -14 592 225 174 0 chr5 32846494 32846672 -170238860 + MER3 DNA MER1_type 1 209 0 1323 98 0 16 chr5 32847437 32847613 -170237919 - AluSg/x SINE Alu -3 309 135 2126 116 6 0 chr5 32847613 32847924 -170237608 - AluSp SINE Alu 0 313 1 1323 98 0 16 chr5 32847924 32847940 -170237592 - AluSg/x SINE Alu -177 135 120 1684 151 10 24 chr5 32848221 32848519 -170237013 - AluJo SINE Alu -18 294 1 401 266 35 0 chr5 32848693 32848806 -170236726 + MER94 DNA DNA 2 118 -16 1581 161 0 11 chr5 32848901 32849180 -170236352 - AluJb SINE Alu -36 276 1 191 340 0 0 chr5 32849191 32849238 -170236294 - L2 LINE L2 -102 3170 3124 1926 141 7 3 chr5 32849598 32849904 -170235628 + AluJb SINE Alu 1 307 -5 1906 106 0 60 chr5 32850188 32850522 -170235010 - AluSq SINE Alu 0 316 1 220 67 0 67 chr5 32851186 32851218 -170234314 + (TTCCC)n Simple_repeat Simple_repeat 3 33 -11 1958 108 0 4 chr5 32851218 32851497 -170234035 - AluSg SINE Alu -32 278 1 220 67 0 67 chr5 32851497 32851509 -170234023 + (TTCCC)n Simple_repeat Simple_repeat 33 44 0 1697 202 45 8 chr5 32851519 32851871 -170233661 + MLT1A1 LTR MaLR 1 365 0 309 249 117 61 chr5 32852222 32852419 -170233113 - MIR SINE MIR -14 248 41 492 18 0 0 chr5 32852633 32852690 -170232842 + (TG)n Simple_repeat Simple_repeat 1 57 0 327 246 0 0 chr5 32852797 32852866 -170232666 - L2 LINE L2 0 3272 3204 1559 168 36 11 chr5 32852985 32853265 -170232267 + AluJb SINE Alu 1 287 -25 1883 125 0 14 chr5 32854053 32854350 -170231182 - AluSx SINE Alu -19 293 1 2292 71 10 3 chr5 32855127 32855436 -170230096 - AluY SINE Alu 0 311 1 1913 128 0 20 chr5 32855438 32855742 -170229790 - AluSx SINE Alu -14 298 1 375 290 95 38 chr5 32855849 32855944 -170229588 + MIR SINE MIR 31 119 -143 1845 153 62 37 chr5 32855944 32856297 -170229235 + MLT1A1 LTR MaLR 1 362 -3 375 290 95 38 chr5 32856297 32856409 -170229123 + MIR SINE MIR 119 250 -12 2177 112 7 0 chr5 32857445 32857750 -170227782 + AluSx SINE Alu 1 307 -5 4100 166 62 22 chr5 32857902 32858776 -170226756 - L1MB7 LINE L1 0 6184 5276 1228 128 5 0 chr5 32858788 32858975 -170226557 - AluSg/x SINE Alu -8 302 115 1433 84 14 33 chr5 32858977 32859190 -170226342 + AluSg/x SINE Alu 89 297 -13 257 222 0 0 chr5 32859210 32859264 -170226268 - L1MB7 LINE L1 -1194 4952 4899 335 258 0 34 chr5 32859264 32859353 -170226179 + L1M4 LINE L1 5215 5300 -846 1834 107 7 18 chr5 32859356 32859637 -170225895 + AluSx SINE Alu 35 312 0 1744 164 13 10 chr5 32859674 32859985 -170225547 + AluJo SINE Alu 1 312 0 2089 114 0 25 chr5 32860029 32860346 -170225186 - AluSq SINE Alu -4 309 1 21 36 0 0 chr5 32860348 32860376 -170225156 + AT_rich Low_complexity Low_complexity 1 28 0 264 174 0 0 chr5 32860614 32860660 -170224872 - L2 LINE L2 -2 3270 3225 1452 73 0 5 chr5 32860840 32861032 -170224500 - AluY SINE Alu -10 301 111 233 167 0 100 chr5 32861032 32861092 -170224440 - AluSp SINE Alu -140 163 110 2025 98 0 47 chr5 32861281 32861598 -170223934 - AluSx SINE Alu -10 302 1 1179 120 0 0 chr5 32862325 32862500 -170223032 - AluY SINE Alu -1 310 136 352 193 217 12 chr5 32862581 32862691 -170222841 - AluJ SINE Alu 0 308 182 827 158 0 0 chr5 32862691 32862824 -170222708 - AluJ SINE Alu -179 133 1 2071 123 0 0 chr5 32862875 32863177 -170222355 + AluSx SINE Alu 1 302 -10 1385 191 113 29 chr5 32863456 32863801 -170221731 - MLT1A2 LTR MaLR 0 374 1 2315 97 0 0 chr5 32864118 32864428 -170221104 + AluSg SINE Alu 1 310 0 1907 116 20 7 chr5 32865078 32865370 -170220162 + AluSx SINE Alu 1 296 -16 747 230 53 79 chr5 32866300 32866533 -170218999 - MIR SINE MIR -3 259 32 1924 120 0 47 chr5 32866533 32866710 -170218822 - AluSx SINE Alu -10 302 145 1888 128 54 7 chr5 32866710 32867006 -170218526 - AluSg SINE Alu 0 310 1 1924 120 0 47 chr5 32867006 32867145 -170218387 - AluSx SINE Alu -167 145 1 747 230 53 79 chr5 32867145 32867176 -170218356 - MIR SINE MIR -230 32 2 26 0 0 0 chr5 32867224 32867250 -170218282 + AT_rich Low_complexity Low_complexity 1 26 0 356 303 91 18 chr5 32867540 32867705 -170217827 - MIR SINE MIR -36 226 50 589 303 20 20 chr5 32867886 32868084 -170217448 - LTR67 LTR ERVL -9 548 351 225 94 0 0 chr5 32868349 32868381 -170217151 + (CCCCAG)n Simple_repeat Simple_repeat 1 32 0 1833 182 16 0 chr5 32868410 32868717 -170216815 - MLT1A1 LTR MaLR 0 365 54 239 208 21 0 chr5 32868716 32868764 -170216768 + MLT1B LTR MaLR 8 56 -334 * 261 86 0 0 chr5 32868777 32868812 -170216720 - MLT1A1 LTR MaLR -330 35 1 894 176 12 57 chr5 32869243 32869487 -170216045 + AluSg/x SINE Alu 69 301 -9 1789 151 0 20 chr5 32870456 32870754 -170214778 - AluJb SINE Alu -20 292 1 2291 142 48 5 chr5 32871061 32871458 -170214074 + L1MC1 LINE L1 5677 6089 -244 579 209 32 70 chr5 32871471 32871629 -170213903 - AluJb SINE Alu -158 154 3 996 158 22 33 chr5 32871650 32871833 -170213699 + L1MC1 LINE L1 6103 6283 -50 1283 194 21 0 chr5 32871840 32872110 -170213422 - AluJo SINE Alu 0 312 38 1198 188 28 53 chr5 32872140 32872422 -170213110 - AluJo SINE Alu -37 275 1 180 111 0 0 chr5 32872422 32872449 -170213083 + (T)n Simple_repeat Simple_repeat 1 27 0 280 67 0 22 chr5 32872450 32872495 -170213037 + L1MC1 LINE L1 6281 6324 -9 1556 74 5 0 chr5 32872507 32872709 -170212823 + AluSx SINE Alu 1 203 -109 325 77 0 19 chr5 32872821 32872873 -170212659 + Alu SINE Alu 252 302 0 788 98 0 0 chr5 32872881 32872983 -170212549 + MSTA LTR MaLR 327 428 0 1613 139 75 0 chr5 32873076 32873343 -170212189 - AluJb SINE Alu -21 291 5 2177 112 7 0 chr5 32876218 32876523 -170209009 + AluSx SINE Alu 1 307 -5 4077 166 63 22 chr5 32876675 32877548 -170207984 - L1MB7 LINE L1 0 6184 5276 1778 123 17 17 chr5 32877560 32877853 -170207679 - AluSx SINE Alu -8 304 12 22 0 0 0 chr5 32878969 32878991 -170206541 + AT_rich Low_complexity Low_complexity 1 22 0 5137 165 18 24 chr5 32880393 32881185 -170204347 + L1PA16 LINE L1 4681 5476 -690 1462 166 10 28 chr5 32881185 32881475 -170204057 + AluJo SINE Alu 12 296 -16 2101 102 10 0 chr5 32881485 32881789 -170203743 + AluSq SINE Alu 1 307 -6 5137 165 18 24 chr5 32881789 32882475 -170203057 + L1PA16 LINE L1 5485 6163 -3 2009 108 3 14 chr5 32882607 32882927 -170202605 - AluSx SINE Alu 0 312 1 339 106 0 0 chr5 32883534 32883581 -170201951 - AluS SINE Alu -226 77 31 2069 97 14 0 chr5 32883724 32884003 -170201529 - AluSx SINE Alu -18 294 12 855 202 16 27 chr5 32884591 32884774 -170200758 - MER20 DNA MER1_type -38 181 1 1321 102 0 11 chr5 32884815 32885002 -170200530 + AluSq SINE Alu 1 185 -128 2162 167 30 40 chr5 32885055 32885444 -170200088 + MSTB LTR MaLR 1 387 -39 2286 40 43 17 chr5 32885444 32885746 -170199786 - AluY SINE Alu -1 310 1 2162 167 30 40 chr5 32885746 32885786 -170199746 + MSTB LTR MaLR 387 426 0 555 134 0 0 chr5 32886037 32886119 -170199413 + AluS SINE Alu 3 84 -229 1900 151 0 0 chr5 32886278 32886570 -170198962 - AluSx SINE Alu -20 292 1 1005 111 0 0 chr5 32886570 32886705 -170198827 - AluSq/x SINE Alu -178 135 1 2155 89 0 0 chr5 32887514 32887829 -170197703 + AluSx SINE Alu 3 317 0 2800 152 15 41 chr5 32887849 32888150 -170197382 - L1MB3 LINE L1 -19 6164 5882 2297 88 0 3 chr5 32888150 32888456 -170197076 - AluSq SINE Alu -8 305 1 2800 152 15 41 chr5 32888456 32888692 -170196840 - L1MB3 LINE L1 -301 5882 5641 415 333 7 20 chr5 32888895 32889042 -170196490 + MIR3 SINE MIR 37 181 -27 24 0 0 0 chr5 32889847 32889871 -170195661 + AT_rich Low_complexity Low_complexity 1 24 0 2036 128 0 3 chr5 32890049 32890354 -170195178 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 32891663 32891684 -170193848 + AT_rich Low_complexity Low_complexity 1 21 0 507 217 154 21 chr5 32893131 32893274 -170192258 + MER58C DNA MER1_type 7 168 -47 816 154 0 0 chr5 32893337 32893454 -170192078 - AluSq/x SINE Alu -194 118 2 189 0 0 0 chr5 32897632 32897653 -170187879 + (TG)n Simple_repeat Simple_repeat 2 22 0 775 217 6 25 chr5 32897725 32897882 -170187650 - FRAM SINE Alu -12 154 1 2260 84 0 0 chr5 32898169 32898465 -170187067 + AluSx SINE Alu 1 296 -16 1335 209 148 25 chr5 32899048 32899479 -170186053 + Charlie4a DNA MER1_type 8 491 -17 278 130 0 22 chr5 32899631 32899677 -170185855 - MER5A DNA MER1_type -93 96 52 579 185 8 15 chr5 32901238 32901368 -170184164 - AluSx SINE Alu 0 312 184 1294 135 5 0 chr5 32901561 32901753 -170183779 - AluSx SINE Alu -119 193 1 218 271 163 47 chr5 32901812 32901941 -170183591 - MER5A DNA MER1_type -3 186 43 1436 186 9 47 chr5 32902132 32902454 -170183078 - AluJo SINE Alu -2 310 1 228 189 0 0 chr5 32902521 32902558 -170182974 - MIR SINE MIR -61 147 111 240 330 9 47 chr5 32902891 32902997 -170182535 + MIR SINE MIR 90 191 -71 1241 197 68 4 chr5 32903003 32903267 -170182265 + AluSx SINE Alu 1 281 -31 185 178 22 0 chr5 32903304 32903349 -170182183 + GA-rich Low_complexity Low_complexity 1 46 0 2219 101 3 0 chr5 32904268 32904575 -170180957 + AluSx SINE Alu 1 308 -4 388 153 0 14 chr5 32904826 32904898 -170180634 - LTR67 LTR ERVL -27 530 460 185 252 68 121 chr5 32904906 32905112 -170180420 - L3 LINE CR1 -221 1356 1162 1285 87 0 157 chr5 32905120 32905464 -170180068 - AluSg SINE Alu -11 299 10 293 273 16 66 chr5 32905505 32905626 -170179906 - L3 LINE CR1 -494 1083 969 1281 167 86 0 chr5 32906122 32906360 -170179172 - L1ME1 LINE L1 -6 6158 5966 1998 164 14 25 chr5 32906360 32906569 -170178963 - MLT1A1 LTR MaLR -2 363 158 1500 210 0 3 chr5 32906569 32906878 -170178654 - AluJb SINE Alu -4 308 1 1998 164 14 25 chr5 32906878 32907035 -170178497 - MLT1A1 LTR MaLR -207 158 1 1281 167 86 0 chr5 32907035 32907184 -170178348 - L1ME1 LINE L1 -198 5966 5759 2217 88 3 0 chr5 32908419 32908713 -170176819 - AluSg1 SINE Alu -14 295 1 1913 106 10 45 chr5 32909604 32909915 -170175617 - AluSg SINE Alu -10 300 1 369 264 78 23 chr5 32909920 32910049 -170175483 - L3 LINE CR1 -473 1104 969 1281 167 86 0 chr5 32910545 32910783 -170174749 - L1ME1 LINE L1 -6 6158 5966 1984 164 14 22 chr5 32910783 32910992 -170174540 - MLT1A1 LTR MaLR -2 363 157 1500 210 0 3 chr5 32910992 32911301 -170174231 - AluJb SINE Alu -4 308 1 1984 164 14 22 chr5 32911301 32911457 -170174075 - MLT1A1 LTR MaLR -208 157 1 1281 167 86 0 chr5 32911457 32911606 -170173926 - L1ME1 LINE L1 -198 5966 5759 2134 107 7 7 chr5 32912711 32913019 -170172513 + AluSx SINE Alu 3 310 -2 226 281 144 46 chr5 32913020 32913347 -170172185 + L1 LINE L1 4699 5057 -1089 1455 171 0 73 chr5 32913464 32913592 -170171940 + AluJo SINE Alu 1 137 -175 2081 87 24 0 chr5 32913592 32913879 -170171653 - AluSc SINE Alu -15 294 1 1455 171 0 73 chr5 32913879 32914066 -170171466 + AluJo SINE Alu 137 293 -19 2109 83 0 33 chr5 32914578 32914879 -170170653 + AluSg SINE Alu 1 291 -19 1788 103 0 56 chr5 32915223 32915549 -170169983 - AluSx SINE Alu 0 309 1 2368 213 59 21 chr5 32915550 32916250 -170169282 - L1 LINE L1 -2965 3181 2456 325 182 223 50 chr5 32916250 32916371 -170169161 + L1 LINE L1 3167 3308 -2838 732 56 0 0 chr5 32916371 32916461 -170169071 + AluY SINE Alu 160 249 -62 1425 127 4 4 chr5 32916461 32916495 -170169037 + AluSg/x SINE Alu 83 116 -194 226 43 0 65 chr5 32916495 32916541 -170168991 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1425 127 4 4 chr5 32916541 32916734 -170168798 + AluSg/x SINE Alu 115 310 0 589 152 0 10 chr5 32916850 32916949 -170168583 - FRAM SINE Alu -8 168 71 462 209 22 0 chr5 32917075 32917166 -170168366 - FRAM SINE Alu -84 92 1 2168 109 3 3 chr5 32918205 32918517 -170167015 - AluSq SINE Alu -1 312 1 1499 167 0 25 chr5 32918604 32918880 -170166652 - AluJo SINE Alu -33 279 11 1908 105 0 14 chr5 32918911 32919196 -170166336 - AluSg SINE Alu -28 282 2 43 20 0 0 chr5 32919203 32919253 -170166279 + AT_rich Low_complexity Low_complexity 1 50 0 1909 133 31 0 chr5 32919328 32919614 -170165918 - AluSx SINE Alu -17 295 1 1654 211 72 34 chr5 32919673 32920118 -170165414 - MLT1C LTR MaLR 0 467 6 208 93 70 0 chr5 32920131 32920174 -170165358 + CT-rich Low_complexity Low_complexity 4 49 0 1742 114 54 20 chr5 32920176 32920473 -170165059 - AluSp SINE Alu -6 307 1 27 92 0 0 chr5 32920760 32920836 -170164696 + AT_rich Low_complexity Low_complexity 1 76 0 253 270 40 27 chr5 32920876 32920950 -170164582 + L2 LINE L2 3153 3227 -45 1573 156 4 14 chr5 32921233 32921509 -170164023 + AluJb SINE Alu 21 293 -19 1529 143 99 0 chr5 32921603 32921875 -170163657 - AluSg SINE Alu -6 304 6 262 88 70 88 chr5 32924648 32924674 -170160858 + MADE1 DNA Mariner 1 26 -54 2400 50 0 22 chr5 32924674 32924991 -170160541 - AluY SINE Alu -1 310 1 262 88 70 88 chr5 32924991 32925021 -170160511 + MADE1 DNA Mariner 26 56 -24 3580 112 70 16 chr5 32925027 32925582 -170159950 - LTR9B LTR ERV1 0 644 60 1947 112 7 17 chr5 32925582 32925878 -170159654 + AluSp SINE Alu 1 293 -20 523 263 86 38 chr5 32926061 32926270 -170159262 + MIR SINE MIR 35 253 -9 788 219 0 0 chr5 32927970 32928125 -170157407 + MLT1A1 LTR MaLR 1 155 -210 1622 104 0 0 chr5 32928125 32928347 -170157185 + AluSg/x SINE Alu 74 295 -15 1435 124 18 5 chr5 32928347 32928565 -170156967 + AluSp SINE Alu 2 222 -91 1594 184 0 4 chr5 32928812 32929090 -170156442 - AluJb SINE Alu -35 277 1 549 234 94 16 chr5 32929171 32929299 -170156233 + L2 LINE L2 3133 3270 -2 1783 133 12 62 chr5 32930416 32930647 -170154885 + AluJo SINE Alu 1 214 -98 1890 135 0 0 chr5 32930647 32930957 -170154575 - AluSx SINE Alu 0 310 1 1783 133 12 62 chr5 32930957 32931048 -170154484 + AluJo SINE Alu 214 308 -4 561 256 38 25 chr5 32931220 32931380 -170154152 - LTR40b LTR ERVL -34 428 267 808 178 41 0 chr5 32931458 32931604 -170153928 + AluJb SINE Alu 147 298 -14 1644 88 0 25 chr5 32931954 32932192 -170153340 - THE1B LTR MaLR -132 232 1 1241 157 42 0 chr5 32932489 32932706 -170152826 - AluJo SINE Alu -2 310 85 1930 101 6 35 chr5 32933404 32933721 -170151811 - AluSg SINE Alu -2 308 1 719 178 0 30 chr5 32933728 32933863 -170151669 - FLAM_C SINE Alu -2 131 1 1978 120 0 3 chr5 32934396 32934679 -170150853 + AluSx SINE Alu 1 282 -30 2194 92 14 0 chr5 32935143 32935437 -170150095 + AluY SINE Alu 1 298 -13 2039 107 0 32 chr5 32935993 32936303 -170149229 + AluSx SINE Alu 1 300 -12 323 277 89 27 chr5 32936431 32936503 -170149029 - MIR3 SINE MIR -42 166 88 355 306 105 0 chr5 32936503 32936627 -170148905 + MIR SINE MIR 3 139 -123 2043 132 83 8 chr5 32936762 32937148 -170148384 - L1MB7 LINE L1 -22 6162 5748 226 118 0 59 chr5 32937764 32937815 -170147717 + (GGGAGA)n Simple_repeat Simple_repeat 2 49 0 1048 172 34 10 chr5 32938138 32938342 -170147190 + MER3 DNA MER1_type 1 209 0 351 272 175 34 chr5 32938490 32938696 -170146836 + MIR SINE MIR 21 255 -7 1884 124 28 3 chr5 32938759 32939049 -170146483 + AluSx SINE Alu 1 297 -15 1840 116 43 20 chr5 32939238 32939541 -170145991 + AluSx SINE Alu 1 310 -2 181 269 97 60 chr5 32940340 32940474 -170145058 + L2 LINE L2 2915 3053 -219 2146 120 0 13 chr5 32941484 32941800 -170143732 - AluSx SINE Alu 0 312 1 948 298 110 36 chr5 32941935 32942897 -170142635 + L2 LINE L2 2282 3313 0 400 235 65 26 chr5 32943500 32943653 -170141879 - MIR3 SINE MIR -17 191 33 2277 156 41 30 chr5 32943739 32943823 -170141709 + L1PB4 LINE L1 5707 5789 -367 2209 109 0 6 chr5 32943823 32944136 -170141396 + AluSx SINE Alu 1 311 -1 2277 156 41 30 chr5 32944136 32944487 -170141045 + L1PB4 LINE L1 5789 6147 -9 238 333 62 19 chr5 32944639 32944801 -170140731 - L2 LINE L2 -207 3065 2897 748 230 92 98 chr5 32944850 32945219 -170140313 + MER21B LTR ERV1 134 500 -363 182 339 0 0 chr5 32945221 32945283 -170140249 - L2 LINE L2 -453 2861 2800 234 263 18 0 chr5 32945355 32945412 -170140120 + (TG)n Simple_repeat Simple_repeat 2 59 0 292 314 99 70 chr5 32945426 32945676 -170139856 - L2 LINE L2 -610 2704 2463 453 206 88 0 chr5 32945676 32945778 -170139754 + MER81 DNA DNA 2 112 -2 292 314 99 70 chr5 32945778 32946001 -170139531 - L2 LINE L2 -851 2463 2217 2421 53 13 3 chr5 32947448 32947750 -170137782 - AluSp SINE Alu -8 305 1 28 29 0 0 chr5 32947758 32947793 -170137739 + AT_rich Low_complexity Low_complexity 1 35 0 1466 188 14 3 chr5 32947841 32948134 -170137398 - AluSx SINE Alu -16 296 1 1120 167 155 4 chr5 32948704 32948943 -170136589 - AluJb SINE Alu -15 297 23 543 297 139 32 chr5 32950879 32950994 -170134538 + L3 LINE CR1 810 911 -666 1853 152 7 0 chr5 32950994 32951296 -170134236 + AluJb SINE Alu 1 304 -8 543 297 139 32 chr5 32951296 32951611 -170133921 + L3 LINE CR1 911 1286 -291 1951 113 0 11 chr5 32952514 32952820 -170132712 + AluSx SINE Alu 1 303 0 1442 111 69 5 chr5 32953632 32953848 -170131684 - MER30 DNA MER1_type 0 230 1 201 179 26 0 chr5 32953976 32954015 -170131517 + CT-rich Low_complexity Low_complexity 2 41 0 1849 117 0 0 chr5 32954377 32954634 -170130898 + AluSg SINE Alu 39 295 -15 361 305 67 12 chr5 32955141 32955305 -170130227 - L3 LINE CR1 -341 1236 1064 1628 149 0 71 chr5 32955581 32955750 -170129782 - AluJb SINE Alu -13 299 162 1518 166 18 7 chr5 32955750 32956034 -170129498 - AluSx SINE Alu -6 306 20 1628 149 0 71 chr5 32956034 32956186 -170129346 - AluJb SINE Alu -150 162 1 193 140 0 40 chr5 32956700 32956750 -170128782 + (GGGAGA)n Simple_repeat Simple_repeat 2 49 0 769 128 112 0 chr5 32957371 32957496 -170128036 + MER30 DNA MER1_type 92 230 0 1039 153 0 0 chr5 32958015 32958185 -170127347 + FRAM SINE Alu 1 169 -7 2227 109 3 0 chr5 32959147 32959459 -170126073 - AluSp SINE Alu 0 313 1 2140 161 0 12 chr5 32959490 32959831 -170125701 + MER1B DNA MER1_type 1 337 -2 292 70 42 28 chr5 32961323 32961394 -170124138 + (CA)n Simple_repeat Simple_repeat 1 72 0 2236 118 0 0 chr5 32961550 32961863 -170123669 - AluSq SINE Alu 0 313 1 1651 173 3 19 chr5 32962156 32962463 -170123069 + AluJb SINE Alu 1 302 -10 291 311 11 11 chr5 32962467 32962557 -170122975 - MIR SINE MIR -150 112 23 350 260 82 61 chr5 32963327 32963523 -170122009 - L1ME4a LINE L1 -6 6115 5916 530 281 45 49 chr5 32963548 32963716 -170121816 + MIR SINE MIR 30 198 -64 2255 88 3 0 chr5 32963716 32964013 -170121519 + AluSx SINE Alu 1 298 -14 530 281 45 49 chr5 32964013 32964068 -170121464 + MIR SINE MIR 198 252 -10 1265 177 6 82 chr5 32964209 32964525 -170121007 - AluJo SINE Alu -12 300 9 1482 145 0 0 chr5 32964538 32964765 -170120767 - AluSx SINE Alu -4 306 80 2441 52 0 10 chr5 32964765 32965074 -170120458 - AluY SINE Alu -4 307 1 544 194 0 0 chr5 32965075 32965168 -170120364 - AluSx SINE Alu -219 94 2 855 117 0 8 chr5 32965864 32965992 -170119540 + FLAM_C SINE Alu 1 127 -16 324 0 0 0 chr5 32965993 32966029 -170119503 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1978 95 46 16 chr5 32966137 32966441 -170119091 - AluSq SINE Alu 0 313 1 2036 101 3 35 chr5 32966909 32967227 -170118305 + AluSg SINE Alu 3 310 0 1798 131 10 27 chr5 32967290 32967588 -170117944 + AluJo SINE Alu 1 293 -19 2133 99 26 0 chr5 32967654 32967956 -170117576 + AluSx SINE Alu 1 310 -2 2114 101 0 23 chr5 32968557 32968885 -170116647 + AluSx SINE Alu 1 321 0 1846 134 0 34 chr5 32969050 32969348 -170116184 + AluJb SINE Alu 1 288 -24 593 197 0 73 chr5 32969665 32969802 -170115730 + MER91B DNA MER1_type 2 128 -62 2079 109 0 13 chr5 32970228 32970531 -170115001 - AluSx SINE Alu -13 299 1 44 70 0 0 chr5 32970643 32970729 -170114803 + AT_rich Low_complexity Low_complexity 1 86 0 371 260 144 42 chr5 32970772 32971229 -170114303 - L1ME4a LINE L1 -3 6118 5615 1590 100 30 4 chr5 32972550 32972780 -170112752 - AluSc SINE Alu -2 307 72 2324 86 0 0 chr5 32972783 32973085 -170112447 - AluSx SINE Alu -10 302 1 1836 128 0 26 chr5 32973091 32973395 -170112137 - AluJo SINE Alu -16 296 1 270 273 116 51 chr5 32974611 32974827 -170110705 + L2 LINE L2 3028 3257 -56 1933 135 0 10 chr5 32974998 32975310 -170110222 + AluSx SINE Alu 1 309 -3 295 277 0 0 chr5 32975737 32975802 -170109730 - MIR3 SINE MIR -9 199 135 183 217 200 17 chr5 32976073 32976133 -170109399 + MER5A DNA MER1_type 113 183 -6 1992 116 3 7 chr5 32976983 32977275 -170108257 - AluJo SINE Alu -10 302 12 335 250 12 0 chr5 32977326 32977406 -170108126 + Charlie7 DNA MER1_type 1 81 -2531 207 100 0 0 chr5 32977873 32977903 -170107629 + (TA)n Simple_repeat Simple_repeat 2 31 0 562 109 0 43 chr5 32977903 32977995 -170107537 - AluSg SINE Alu -9 303 216 1083 105 0 20 chr5 32977995 32978148 -170107384 - AluSg SINE Alu -160 150 1 2257 92 7 3 chr5 32978485 32978788 -170106744 - AluSx SINE Alu -8 304 1 21 0 0 0 chr5 32978895 32978916 -170106616 + AT_rich Low_complexity Low_complexity 1 21 0 1831 103 9 97 chr5 32979098 32979437 -170106095 - AluSq SINE Alu -4 309 1 255 268 24 41 chr5 32979708 32979831 -170105701 - MER117 DNA MER1_type -31 166 46 196 207 69 138 chr5 32979888 32979975 -170105557 - L2 LINE L2 -46 3267 3187 1930 110 9 55 chr5 32980019 32980346 -170105186 - AluSx SINE Alu 0 312 1 257 330 69 56 chr5 32980638 32980871 -170104661 - L2 LINE L2 -523 2791 2556 3493 178 50 2 chr5 32981622 32982240 -170103292 + Tigger7 DNA MER2_type 3 650 -1837 2265 132 0 0 chr5 32982240 32982551 -170102981 + AluSx SINE Alu 1 311 -1 961 204 52 0 chr5 32982625 32982816 -170102716 - MER58A DNA MER1_type -23 201 1 191 114 29 0 chr5 32982970 32983005 -170102527 + GA-rich Low_complexity Low_complexity 4 39 0 2378 93 3 6 chr5 32983083 32983394 -170102138 + AluSp SINE Alu 1 310 -3 1117 205 19 0 chr5 32983399 32983609 -170101923 + MLT1A1 LTR MaLR 149 362 -3 479 65 0 0 chr5 32983714 32983776 -170101756 - Alu SINE Alu -255 63 2 24 53 0 0 chr5 32983949 32983987 -170101545 + AT_rich Low_complexity Low_complexity 1 38 0 267 269 0 15 chr5 32984254 32984321 -170101211 - MER94 DNA DNA -5 129 64 1767 170 3 3 chr5 32984337 32984619 -170100913 - AluJo SINE Alu -26 286 5 393 216 14 0 chr5 32984626 32984700 -170100832 - MER94 DNA DNA -59 75 1 305 27 68 27 chr5 32985005 32985078 -170100454 + (CA)n Simple_repeat Simple_repeat 2 77 0 598 42 90 12 chr5 32985090 32985257 -170100275 + (CA)n Simple_repeat Simple_repeat 1 180 0 2427 72 0 0 chr5 32986119 32986410 -170099122 + AluY SINE Alu 1 291 -20 1255 151 5 15 chr5 32986604 32986809 -170098723 + MER2 DNA MER2_type 1 203 -142 1094 44 15 0 chr5 32986820 32986957 -170098575 - SVA Other Other 0 1386 1248 365 278 56 31 chr5 32988039 32988201 -170097331 + MIR SINE MIR 30 195 -67 1876 103 4 11 chr5 32988207 32988468 -170097064 + AluSx SINE Alu 1 259 -53 1912 117 27 24 chr5 32989595 32989893 -170095639 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 32989963 32989992 -170095540 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 32990199 32990273 -170095259 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 32990333 32990361 -170095171 + AT_rich Low_complexity Low_complexity 1 28 0 2140 127 0 3 chr5 32990403 32990710 -170094822 - AluSx SINE Alu -6 306 1 716 245 70 54 chr5 32990783 32990931 -170094601 + L1ME3A LINE L1 5139 5283 -881 2310 98 14 0 chr5 32990931 32991227 -170094305 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 32991231 32991253 -170094279 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 716 245 70 54 chr5 32991253 32991511 -170094021 + L1ME3A LINE L1 5285 5546 -618 593 239 62 0 chr5 32991634 32991764 -170093768 + MER58C DNA MER1_type 34 171 -44 1520 217 66 48 chr5 32991792 32992289 -170093243 + L1ME3A LINE L1 5650 6165 -2 285 200 17 0 chr5 32993715 32993775 -170091757 - MIR SINE MIR -118 144 84 2250 103 10 0 chr5 32994109 32994401 -170091131 - AluSx SINE Alu -17 295 1 1619 159 19 30 chr5 32994721 32995023 -170090509 + AluJo SINE Alu 14 312 0 793 194 133 0 chr5 32995038 32995218 -170090314 + MER3 DNA MER1_type 6 209 0 277 200 0 0 chr5 32995176 32995226 -170090306 - MER3 DNA MER1_type -120 89 40 * 2240 104 0 0 chr5 32996327 32996615 -170088917 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 32996955 32996978 -170088554 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 902 229 0 0 chr5 32996979 32997145 -170088387 - FRAM SINE Alu 0 166 1 404 171 0 0 chr5 32997616 32997692 -170087840 - MER116 DNA Mariner -4 76 1 338 253 30 10 chr5 32998188 32998287 -170087245 + MIR SINE MIR 113 213 -49 2207 134 0 10 chr5 32998483 32998797 -170086735 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 32998915 32998952 -170086580 + AT_rich Low_complexity Low_complexity 1 37 0 212 310 53 26 chr5 32999040 32999153 -170086379 - MIR SINE MIR -119 143 28 1796 159 18 0 chr5 32999392 32999669 -170085863 - AluJo SINE Alu -30 282 1 1999 133 0 33 chr5 33000979 33001280 -170084252 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 33002532 33002555 -170082977 + AT_rich Low_complexity Low_complexity 1 23 0 2418 85 0 10 chr5 33002559 33002864 -170082668 + AluSq SINE Alu 1 302 -11 247 198 302 8 chr5 33004765 33004891 -170080641 + MIR SINE MIR 82 244 -18 201 330 64 18 chr5 33005557 33005666 -170079866 + MIR3 SINE MIR 77 190 -18 22 0 0 0 chr5 33005739 33005761 -170079771 + AT_rich Low_complexity Low_complexity 1 22 0 793 178 0 0 chr5 33005803 33005921 -170079611 + FLAM_C SINE Alu 1 118 -15 641 148 96 26 chr5 33006114 33006229 -170079303 - FLAM_C SINE Alu -16 127 5 2185 127 0 0 chr5 33006566 33006865 -170078667 - AluJb SINE Alu -13 299 1 1954 118 40 0 chr5 33007199 33007520 -170078012 - AluSx SINE Alu 0 332 1 254 254 30 15 chr5 33007810 33007877 -170077655 - L2 LINE L2 -4 3268 3201 337 309 35 50 chr5 33008141 33008342 -170077190 - L3 LINE CR1 -555 1022 825 2315 109 0 3 chr5 33008425 33008729 -170076803 - AluSx SINE Alu -9 303 1 2067 128 7 0 chr5 33008875 33009172 -170076360 + AluSx SINE Alu 4 302 -10 2053 133 7 3 chr5 33009202 33009502 -170076030 + AluSx SINE Alu 1 301 -11 2130 96 7 4 chr5 33009927 33010208 -170075324 + AluSq SINE Alu 1 282 -31 252 0 0 0 chr5 33010209 33010237 -170075295 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2025 133 3 11 chr5 33010245 33010531 -170075001 + AluSx SINE Alu 1 284 -28 1322 213 75 22 chr5 33012009 33012437 -170073095 + L1MC4 LINE L1 7050 7526 -297 2243 117 0 13 chr5 33012742 33013051 -170072481 + AluSg SINE Alu 2 306 -4 833 176 63 31 chr5 33013053 33013212 -170072320 + AluJo/FRAM SINE Alu 131 294 -18 2069 123 0 13 chr5 33013369 33013670 -170071862 + AluSx SINE Alu 5 301 -11 251 282 39 0 chr5 33013758 33013836 -170071696 + L2 LINE L2 3191 3271 -1 2130 106 27 3 chr5 33014602 33014894 -170070638 + AluSx SINE Alu 1 299 -13 1494 106 0 37 chr5 33015582 33015827 -170069705 + AluSg/x SINE Alu 68 303 -9 313 313 35 50 chr5 33015910 33016111 -170069421 + L3 LINE CR1 825 1022 -555 254 254 30 15 chr5 33016375 33016442 -170069090 + L2 LINE L2 3201 3268 -4 1926 108 52 7 chr5 33016732 33017020 -170068512 + AluSx SINE Alu 1 301 -11 862 173 13 0 chr5 33017020 33017176 -170068356 + AluJo/FRAM SINE Alu 135 292 -20 331 144 22 122 chr5 33017177 33017267 -170068265 - L1MB7 LINE L1 -57 6127 6047 429 83 0 17 chr5 33017644 33017741 -170067791 + AluSp/q SINE Alu 226 321 0 2072 126 13 3 chr5 33017769 33018078 -170067454 - AluSq SINE Alu -1 312 1 1991 144 0 3 chr5 33018316 33018615 -170066917 - AluJo SINE Alu -14 298 1 183 80 0 0 chr5 33018727 33018752 -170066780 + (CA)n Simple_repeat Simple_repeat 1 25 0 2473 76 0 16 chr5 33019064 33019381 -170066151 - AluSx SINE Alu 0 312 1 2464 96 0 0 chr5 33020851 33021164 -170064368 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 33021511 33021535 -170063997 + (A)n Simple_repeat Simple_repeat 1 24 0 700 228 91 121 chr5 33021544 33022017 -170063515 - LTR40a LTR ERVL -60 459 1 774 241 131 24 chr5 33024681 33024971 -170060561 - HAL1 LINE L1 -2183 324 4 380 225 142 8 chr5 33025000 33025120 -170060412 - MIR SINE MIR -118 144 9 298 79 0 0 chr5 33025272 33025310 -170060222 - U2 snRNA snRNA -150 38 1 2196 115 3 0 chr5 33025864 33026159 -170059373 - AluSx SINE Alu -16 296 1 2038 133 17 7 chr5 33026595 33026896 -170058636 - AluSx SINE Alu -8 304 1 1900 100 0 0 chr5 33027501 33027741 -170057791 - AluSx SINE Alu -12 300 61 673 157 0 60 chr5 33027742 33027876 -170057656 - FLAM_A SINE Alu -7 126 1 1786 80 59 80 chr5 33028166 33028487 -170057045 - AluY SINE Alu 0 315 1 198 317 12 37 chr5 33029053 33029135 -170056397 + MIR SINE MIR 20 99 -109 2331 95 0 7 chr5 33030082 33030377 -170055155 - AluSg SINE Alu -16 294 2 643 192 45 124 chr5 33030380 33030485 -170055047 + ORSL DNA AcHobo 31 143 -132 2190 108 3 29 chr5 33030485 33030799 -170054733 + AluSc SINE Alu 1 306 -3 643 192 45 124 chr5 33030799 33030959 -170054573 + ORSL DNA AcHobo 143 275 0 312 303 115 46 chr5 33030992 33031210 -170054322 + MIR SINE MIR 20 252 -10 5892 94 46 27 chr5 33031326 33034077 -170051455 + SVA Other Other 12 1369 -17 261 0 0 0 chr5 33034083 33034112 -170051420 + (CAA)n Simple_repeat Simple_repeat 2 30 0 186 103 0 0 chr5 33034133 33034162 -170051370 + (A)n Simple_repeat Simple_repeat 1 29 0 897 28 0 0 chr5 33034170 33034277 -170051255 + AluY SINE Alu 2 108 -203 1774 64 0 30 chr5 33034277 33034510 -170051022 + AluY SINE Alu 69 294 -17 2139 98 3 35 chr5 33034515 33034830 -170050702 + AluSx SINE Alu 1 305 -7 237 303 124 0 chr5 33035151 33035240 -170050292 - MIR3 SINE MIR -32 176 77 364 298 58 0 chr5 33035574 33035695 -170049837 + MIR SINE MIR 20 147 -61 1906 151 3 0 chr5 33035856 33036160 -170049372 - AluSq SINE Alu -8 305 1 2079 117 0 0 chr5 33036280 33036571 -170048961 + AluSq SINE Alu 1 291 -22 1952 117 3 29 chr5 33037652 33037959 -170047573 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 33038029 33038058 -170047474 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 33038264 33038338 -170047194 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 33038398 33038426 -170047106 + AT_rich Low_complexity Low_complexity 1 28 0 1819 154 3 3 chr5 33038468 33038774 -170046758 - AluSx SINE Alu -6 306 1 708 245 70 54 chr5 33038844 33038992 -170046540 + L1ME3A LINE L1 5139 5283 -879 2180 98 14 0 chr5 33038992 33039288 -170046244 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 33039292 33039314 -170046218 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 708 245 70 54 chr5 33039314 33039572 -170045960 + L1ME3A LINE L1 5285 5546 -616 604 231 62 0 chr5 33039695 33039825 -170045707 + MER58C DNA MER1_type 34 171 -44 1503 218 66 48 chr5 33039853 33040350 -170045182 + L1ME3A LINE L1 5650 6165 -2 316 216 54 0 chr5 33041768 33041842 -170043690 - MIR SINE MIR -108 154 77 2123 103 10 0 chr5 33042169 33042461 -170043071 - AluSx SINE Alu -17 295 1 1512 159 19 30 chr5 33042780 33043082 -170042450 + AluJo SINE Alu 14 312 0 786 194 133 0 chr5 33043097 33043277 -170042255 + MER3 DNA MER1_type 6 209 0 280 200 0 0 chr5 33043235 33043285 -170042247 - MER3 DNA MER1_type -120 89 40 * 2117 104 0 0 chr5 33044386 33044674 -170040858 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 33045014 33045037 -170040495 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 909 229 0 0 chr5 33045038 33045204 -170040328 - FRAM SINE Alu 0 166 1 401 171 0 0 chr5 33045675 33045751 -170039781 - MER116 DNA Mariner -4 76 1 390 242 58 25 chr5 33046230 33046350 -170039182 + MIR SINE MIR 94 217 -45 2079 134 0 10 chr5 33046541 33046855 -170038677 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 33046973 33047010 -170038522 + AT_rich Low_complexity Low_complexity 1 37 0 257 343 37 22 chr5 33047098 33047232 -170038300 - MIR SINE MIR -119 143 8 1680 159 18 0 chr5 33047450 33047727 -170037805 - AluJo SINE Alu -30 282 1 1875 133 0 33 chr5 33049037 33049338 -170036194 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 33050586 33050609 -170034923 + AT_rich Low_complexity Low_complexity 1 23 0 2273 85 0 16 chr5 33050613 33050920 -170034612 + AluSq SINE Alu 1 302 -11 296 218 245 20 chr5 33052831 33052978 -170032554 + MIR SINE MIR 82 261 -1 242 330 64 18 chr5 33053624 33053733 -170031799 + MIR3 SINE MIR 77 190 -18 797 178 0 0 chr5 33053870 33053988 -170031544 + FLAM_C SINE Alu 1 118 -15 645 148 96 26 chr5 33054181 33054296 -170031236 - FLAM_C SINE Alu -16 127 5 2073 127 0 0 chr5 33054633 33054933 -170030599 - AluJb SINE Alu -12 300 1 1823 118 40 0 chr5 33055267 33055573 -170029959 - AluSx SINE Alu 0 317 1 283 254 30 15 chr5 33055863 33055930 -170029602 - L2 LINE L2 -4 3268 3201 404 311 29 62 chr5 33056194 33056438 -170029094 - L3 LINE CR1 -555 1022 787 2186 109 0 3 chr5 33056478 33056782 -170028750 - AluSx SINE Alu -9 303 1 2016 133 0 0 chr5 33056925 33057227 -170028305 + AluSx SINE Alu 1 302 -10 1928 133 7 3 chr5 33057257 33057557 -170027975 + AluSx SINE Alu 1 301 -11 2009 96 7 4 chr5 33057982 33058263 -170027269 + AluSq SINE Alu 1 282 -31 216 0 0 0 chr5 33058264 33058288 -170027244 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 1879 136 3 11 chr5 33058296 33058582 -170026950 + AluSx SINE Alu 1 284 -28 1800 213 97 18 chr5 33060061 33060558 -170024974 + L1MC4 LINE L1 7129 7664 -378 288 312 13 0 chr5 33060760 33060837 -170024695 - MER5C DNA MER1_type -245 79 2 1000 215 40 15 chr5 33060917 33061070 -170024462 + L1MC4 LINE L1 7759 7924 -118 186 103 0 0 chr5 33061070 33061099 -170024433 + (TG)n Simple_repeat Simple_repeat 2 30 0 1000 215 40 15 chr5 33061099 33061219 -170024313 + L1MC4 LINE L1 7924 8039 -3 2192 101 7 0 chr5 33061222 33061520 -170024012 + AluSg SINE Alu 1 300 -10 1763 101 90 0 chr5 33062949 33063216 -170022316 + AluSp SINE Alu 1 291 -22 1876 90 0 0 chr5 33064684 33064929 -170020603 + AluSx SINE Alu 1 245 -67 2223 94 0 3 chr5 33067048 33067347 -170018185 - AluSx SINE Alu -14 298 1 198 288 119 34 chr5 33067458 33067576 -170017956 + MIR SINE MIR 2 129 -133 277 240 40 40 chr5 33067611 33067686 -170017846 + L1ME4a LINE L1 5974 6048 -73 2284 101 0 0 chr5 33068239 33068547 -170016985 + AluSx SINE Alu 1 308 -4 21 57 0 0 chr5 33068585 33068620 -170016912 + AT_rich Low_complexity Low_complexity 1 35 0 674 153 8 17 chr5 33068850 33068968 -170016564 - L1MB5 LINE L1 -3 6171 6055 259 275 135 39 chr5 33069373 33069595 -170015937 - MIR SINE MIR 0 262 17 2278 99 0 0 chr5 33069908 33070221 -170015311 + AluSq SINE Alu 1 313 0 2134 115 0 13 chr5 33070595 33070907 -170014625 + AluSg SINE Alu 2 309 -1 837 203 63 6 chr5 33070909 33071067 -170014465 + AluJo/FRAM SINE Alu 131 297 -15 2046 116 3 13 chr5 33071224 33071535 -170013997 + AluSx SINE Alu 5 312 0 2277 79 0 13 chr5 33071772 33072077 -170013455 + AluSq SINE Alu 1 301 -12 2404 72 0 3 chr5 33072314 33072620 -170012912 + AluY SINE Alu 1 305 -6 2985 71 8 5 chr5 33072948 33073342 -170012190 + L1PA10 LINE L1 5771 6165 -3 225 0 0 0 chr5 33073967 33073992 -170011540 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 2050 77 15 4 chr5 33073994 33074267 -170011265 - AluY SINE Alu -34 277 2 2206 103 0 0 chr5 33074272 33074573 -170010959 - AluSx SINE Alu -11 301 1 292 304 232 14 chr5 33074673 33074880 -170010652 + MIR SINE MIR 9 260 -2 307 214 31 51 chr5 33074911 33075009 -170010523 + L1MC4 LINE L1 6614 6709 -1333 262 246 70 53 chr5 33075250 33075421 -170010111 - L1ME4a LINE L1 -7 6114 5941 2081 100 0 17 chr5 33075930 33076230 -170009302 - AluSx SINE Alu -17 295 1 550 250 78 39 chr5 33076521 33076725 -170008807 + MIR SINE MIR 10 221 -41 2108 110 17 0 chr5 33077201 33077501 -170008031 - AluSx SINE Alu -7 305 1 1103 149 26 0 chr5 33077507 33077702 -170007830 - L1MA6 LINE L1 0 6300 6101 2251 88 3 3 chr5 33077702 33077996 -170007536 - AluSx SINE Alu -18 294 1 869 167 28 39 chr5 33078032 33078212 -170007320 - L1 LINE L1 -1439 4707 4530 505 96 27 0 chr5 33078653 33078726 -170006806 - L1MA6 LINE L1 -75 6225 6151 2041 86 0 47 chr5 33078912 33079242 -170006290 - AluSq SINE Alu 0 316 1 1159 175 51 27 chr5 33083453 33083533 -170001999 - L1MD3 LINE L1 -1 7994 7917 2607 66 0 0 chr5 33083533 33083836 -170001696 - AluSg SINE Alu -7 303 1 1159 175 51 27 chr5 33083836 33084012 -170001520 - L1MD3 LINE L1 -78 7917 7732 2284 107 0 0 chr5 33084245 33084543 -170000989 + AluSx SINE Alu 1 298 -14 2226 108 3 0 chr5 33084543 33084838 -170000694 + AluSx SINE Alu 1 296 -16 2471 174 5 18 chr5 33085712 33085949 -169999583 - Tigger2a DNA MER2_type -2276 432 202 2070 148 0 7 chr5 33085949 33086246 -169999286 + AluSx SINE Alu 1 295 -17 2471 174 5 18 chr5 33086246 33086446 -169999086 - Tigger2a DNA MER2_type -2506 202 1 1294 147 15 79 chr5 33086881 33087146 -169998386 + AluJo SINE Alu 51 298 -14 2328 72 0 34 chr5 33087972 33088293 -169997239 - AluY SINE Alu 0 311 2 2213 100 0 7 chr5 33088580 33088870 -169996662 - AluSx SINE Alu -24 288 1 1994 145 34 0 chr5 33089081 33089377 -169996155 - AluJb SINE Alu -6 306 1 2083 93 55 14 chr5 33090223 33090512 -169995020 + AluSx SINE Alu 1 301 -11 414 259 88 0 chr5 33092220 33092367 -169993165 + MER5B DNA MER1_type 19 178 0 669 230 126 0 chr5 33093636 33093810 -169991722 - MIR SINE MIR -59 203 8 441 204 150 26 chr5 33095055 33095168 -169990364 + FLAM_A SINE Alu 1 127 -6 254 273 40 10 chr5 33095359 33095458 -169990074 + L1MEc LINE L1 1259 1360 -5036 185 0 40 0 chr5 33095493 33095518 -169990014 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 928 174 7 0 chr5 33095527 33095682 -169989850 + FRAM SINE Alu 5 160 -16 261 239 206 43 chr5 33095699 33095908 -169989624 + HAL1 LINE L1 1404 1646 -861 537 133 0 0 chr5 33096378 33096453 -169989079 + AluS SINE Alu 2 76 -237 732 158 17 0 chr5 33096614 33096734 -169988798 - AluSg/x SINE Alu -18 292 171 1833 107 23 4 chr5 33096735 33096998 -169988534 + AluSx SINE Alu 44 311 -1 1901 156 7 0 chr5 33097105 33097394 -169988138 + AluJb SINE Alu 1 291 -21 225 0 0 0 chr5 33097394 33097419 -169988113 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 279 305 88 25 chr5 33097419 33097737 -169987795 + L1ME LINE L1 5262 5599 -563 496 208 28 9 chr5 33098059 33098165 -169987367 - MLT1J LTR MaLR -3 508 401 3329 111 56 10 chr5 33098203 33098706 -169986826 - MER1A DNA MER1_type -1 526 1 363 274 9 44 chr5 33098732 33098845 -169986687 - MIR SINE MIR -70 192 84 1077 187 9 14 chr5 33099609 33099823 -169985709 + AluJo SINE Alu 86 298 -14 21 0 0 0 chr5 33102419 33102440 -169983092 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 33103133 33103161 -169982371 + AT_rich Low_complexity Low_complexity 1 28 0 2272 62 0 62 chr5 33103853 33104162 -169981370 + AluY SINE Alu 1 290 -21 499 161 0 0 chr5 33104703 33104790 -169980742 + AluS SINE Alu 2 88 -224 2523 64 3 0 chr5 33105202 33105499 -169980033 + AluSc SINE Alu 1 298 -11 240 347 60 0 chr5 33105749 33105899 -169979633 + L1M4 LINE L1 3729 3887 -2259 2230 89 4 4 chr5 33105923 33106204 -169979328 + AluSx SINE Alu 1 281 -31 767 125 75 0 chr5 33106374 33106494 -169979038 - FLAM_C SINE Alu -13 130 2 2420 87 0 0 chr5 33106667 33106967 -169978565 - AluY SINE Alu -11 300 1 2237 90 0 7 chr5 33106970 33107259 -169978273 - AluSc SINE Alu -14 295 9 354 299 105 36 chr5 33107370 33107704 -169977828 + L1M4 LINE L1 4454 4810 -1336 205 195 0 0 chr5 33107922 33107963 -169977569 + A-rich Low_complexity Low_complexity 2 42 0 302 0 26 0 chr5 33108173 33108211 -169977321 + (CA)n Simple_repeat Simple_repeat 2 40 0 1936 156 0 23 chr5 33108807 33109115 -169976417 + AluJo SINE Alu 1 301 -11 495 265 118 79 chr5 33109526 33109816 -169975716 + HAL1b LINE L1 222 499 -849 2279 89 3 3 chr5 33109816 33110108 -169975424 + AluSg SINE Alu 1 292 -18 495 265 118 79 chr5 33110108 33110409 -169975123 + HAL1b LINE L1 499 836 -512 1925 168 0 3 chr5 33110618 33110916 -169974616 + AluJo SINE Alu 1 297 -15 508 162 36 102 chr5 33110968 33111011 -169974521 - L1MB3 LINE L1 -2 6181 6137 2385 79 7 0 chr5 33111011 33111301 -169974231 - AluSg1 SINE Alu -17 292 1 508 162 36 102 chr5 33111301 33111384 -169974148 - L1MB3 LINE L1 -46 6137 6066 2248 121 0 0 chr5 33111384 33111682 -169973850 - AluSx SINE Alu -14 298 1 508 162 36 102 chr5 33111682 33111721 -169973811 - L1MB3 LINE L1 -117 6066 6026 2378 183 79 82 chr5 33111776 33112082 -169973450 + L1MC5 LINE L1 6649 6955 -1006 1697 165 57 20 chr5 33112082 33112488 -169973044 + L1MA7 LINE L1 5865 6285 -6 2378 183 79 82 chr5 33112488 33112692 -169972840 + L1MC5 LINE L1 6955 7158 -803 2185 104 0 26 chr5 33112692 33113000 -169972532 + AluSg SINE Alu 1 300 -10 2327 57 13 57 chr5 33113005 33113320 -169972212 + AluY SINE Alu 2 302 -9 2378 183 79 82 chr5 33113320 33113688 -169971844 + L1MC5 LINE L1 7162 7531 -430 301 265 43 60 chr5 33113724 33113841 -169971691 + L1ME3A LINE L1 5967 6081 -89 1740 136 123 7 chr5 33114313 33114614 -169970918 + MER1B DNA MER1_type 2 337 0 280 293 193 27 chr5 33114619 33114984 -169970548 + L1MC/D LINE L1 5491 5915 -321 666 219 58 13 chr5 33116710 33116865 -169968667 + MER58A DNA MER1_type 46 207 -17 533 181 145 7 chr5 33119502 33119640 -169965892 + L1ME4a LINE L1 5962 6118 -3 717 200 171 0 chr5 33119749 33119919 -169965613 - MER3 DNA MER1_type -3 206 8 1215 299 68 39 chr5 33120071 33120629 -169964903 + L1MEc LINE L1 109 696 -5700 2037 123 0 25 chr5 33120629 33120947 -169964585 + AluSq SINE Alu 1 310 -3 1215 299 68 39 chr5 33120947 33121141 -169964391 + L1MEc LINE L1 696 883 -5513 481 152 20 61 chr5 33121143 33121242 -169964290 + AluJ SINE Alu 85 179 -133 1592 89 9 22 chr5 33121243 33121467 -169964065 + AluSq SINE Alu 93 313 0 534 251 98 6 chr5 33121481 33121644 -169963888 + MIR SINE MIR 85 262 0 2428 78 0 0 chr5 33122099 33122392 -169963140 - AluY SINE Alu -18 293 1 603 110 110 0 chr5 33122561 33122661 -169962871 + AluJ SINE Alu 183 293 -19 311 357 14 21 chr5 33123025 33123165 -169962367 + L2 LINE L2 3134 3272 0 289 266 43 0 chr5 33123171 33123265 -169962267 + MIR SINE MIR 47 144 -118 298 167 106 15 chr5 33123267 33123333 -169962199 - LTR16A1 LTR ERVL -2 455 384 2217 86 3 80 chr5 33123664 33123811 -169961721 + AluSx SINE Alu 1 109 -203 2475 45 25 0 chr5 33123811 33124097 -169961435 + AluSp SINE Alu 2 294 -19 2217 86 3 80 chr5 33124097 33124285 -169961247 + AluSx SINE Alu 109 310 -2 810 221 55 3 chr5 33124457 33124650 -169960882 - MLT1F1 LTR MaLR -298 251 7 2516 60 0 3 chr5 33124765 33125063 -169960469 - AluY SINE Alu -14 297 1 1466 137 9 5 chr5 33126880 33127099 -169958433 + AluJb SINE Alu 87 306 -6 21 57 0 0 chr5 33127136 33127171 -169958361 + AT_rich Low_complexity Low_complexity 1 35 0 394 147 0 0 chr5 33127638 33127713 -169957819 + L1MB3 LINE L1 6108 6182 -1 24 32 0 0 chr5 33127799 33127830 -169957702 + AT_rich Low_complexity Low_complexity 1 31 0 334 235 221 7 chr5 33128462 33128598 -169956934 + Charlie7 DNA MER1_type 37 201 -2411 483 212 8 17 chr5 33128661 33128779 -169956753 + Charlie7 DNA MER1_type 329 445 -2167 21 36 0 0 chr5 33128982 33129010 -169956522 + AT_rich Low_complexity Low_complexity 1 28 0 970 191 35 111 chr5 33129010 33129134 -169956398 + AluJo SINE Alu 1 133 -169 1942 155 0 10 chr5 33129134 33129430 -169956102 - AluSx SINE Alu -19 293 1 970 191 35 111 chr5 33129430 33129620 -169955912 + AluJo SINE Alu 133 291 -11 484 143 66 11 chr5 33129646 33129737 -169955795 + HY3 scRNA scRNA 3 98 -3 1107 299 124 0 chr5 33129864 33130219 -169955313 + MLT1I LTR MaLR 7 405 -4 1765 166 28 0 chr5 33130805 33131094 -169954438 + AluSx SINE Alu 1 297 -15 2431 80 0 3 chr5 33131104 33131404 -169954128 + AluSq SINE Alu 1 299 -14 1025 174 135 0 chr5 33131554 33131761 -169953771 + MER46A DNA MER2_type 1 235 -1 2099 123 10 7 chr5 33131863 33132165 -169953367 - AluSp SINE Alu -10 303 1 2172 123 0 0 chr5 33132283 33132576 -169952956 + AluSq SINE Alu 1 293 -20 2265 117 0 0 chr5 33132807 33133105 -169952427 - AluSg SINE Alu -8 302 5 351 135 0 0 chr5 33133057 33133109 -169952423 - Alu SINE Alu -250 52 1 23 0 0 0 chr5 33133184 33133207 -169952325 + AT_rich Low_complexity Low_complexity 1 23 0 674 171 105 106 chr5 33133234 33133276 -169952256 - MER33 DNA MER1_type -2267 318 277 186 62 0 31 chr5 33133285 33133317 -169952215 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 1090 58 0 7 chr5 33133317 33133446 -169952086 - L1PA4 LINE L1 -8 6147 6003 674 171 105 106 chr5 33133446 33133756 -169951776 - MER33 DNA MER1_type -2308 277 1 1294 174 8 2 chr5 33134060 33134329 -169951203 - MER2 DNA MER2_type -24 321 2 209 310 103 41 chr5 33134355 33134500 -169951032 + L2 LINE L2 2599 2752 -562 474 246 161 0 chr5 33134653 33134877 -169950655 + HAL1 LINE L1 863 1122 -1385 396 229 124 67 chr5 33134923 33135129 -169950403 + HAL1 LINE L1 1258 1484 -1023 1138 181 110 79 chr5 33135129 33135281 -169950251 + AluJb SINE Alu 1 147 -155 1969 117 19 45 chr5 33135281 33135589 -169949943 + AluSx SINE Alu 1 300 -12 1138 181 110 79 chr5 33135589 33135728 -169949804 + AluJb SINE Alu 147 301 -1 396 229 124 67 chr5 33135728 33135788 -169949744 + HAL1 LINE L1 1484 1539 -968 2031 140 0 3 chr5 33135788 33136088 -169949444 + AluSx SINE Alu 1 299 -13 9073 21 4 272 chr5 33136484 33138369 -169947163 + SVA Other Other 7 1386 0 29 0 0 0 chr5 33138369 33138398 -169947134 + AT_rich Low_complexity Low_complexity 1 29 0 1348 196 16 8 chr5 33139235 33139490 -169946042 + AluJo SINE Alu 26 282 -30 2022 146 7 3 chr5 33140910 33141211 -169944321 + AluJb SINE Alu 1 302 -10 311 242 40 74 chr5 33141620 33141709 -169943823 + L1ME4a LINE L1 5822 5906 -215 1328 123 76 0 chr5 33141709 33141920 -169943612 + MER30 DNA MER1_type 4 230 0 311 242 40 74 chr5 33141920 33141979 -169943553 + L1ME4a LINE L1 5906 5965 -156 689 121 0 0 chr5 33142257 33142356 -169943176 + AluSc SINE Alu 205 303 -6 191 200 200 0 chr5 33142839 33142899 -169942633 + MIR SINE MIR 174 245 -17 463 268 189 25 chr5 33142929 33143209 -169942323 - MER102a DNA MER1_type -3 327 2 1297 121 16 5 chr5 33143394 33143411 -169942121 + AluSq SINE Alu 113 128 -185 2330 85 0 19 chr5 33143411 33143727 -169941805 + AluY SINE Alu 1 310 -1 1297 121 16 5 chr5 33143727 33143899 -169941633 + AluSq SINE Alu 128 304 -9 245 111 222 0 chr5 33144184 33144238 -169941294 + MLT1F1 LTR MaLR 502 567 0 822 198 88 10 chr5 33144238 33144430 -169941102 + L1MB8 LINE L1 5972 6178 0 1987 116 46 0 chr5 33144617 33144902 -169940630 + AluSx SINE Alu 1 298 -14 259 293 111 60 chr5 33144904 33145521 -169940011 + L1M4 LINE L1 4191 4869 -1277 1138 176 72 9 chr5 33145521 33145743 -169939789 - MER46A DNA MER2_type 0 236 1 259 293 111 60 chr5 33145743 33146014 -169939518 + L1M4 LINE L1 4869 5125 -1021 27 51 0 17 chr5 33146121 33146148 -169939384 + AT_rich Low_complexity Low_complexity 1 27 -31 1380 188 74 7 chr5 33146148 33146419 -169939113 + AluJo SINE Alu 1 289 -23 27 51 0 17 chr5 33146419 33146450 -169939082 + AT_rich Low_complexity Low_complexity 27 58 0 1920 141 55 69 chr5 33146613 33147031 -169938501 + L1MB3 LINE L1 5759 6170 -13 2339 101 0 0 chr5 33147031 33147328 -169938204 - AluSg SINE Alu -13 297 1 225 122 82 0 chr5 33147350 33147399 -169938133 + L1MC/D LINE L1 5423 5475 -2333 367 255 176 30 chr5 33148173 33148373 -169937159 - MIR SINE MIR -29 233 11 1643 141 177 3 chr5 33148444 33148749 -169936783 - MER46B DNA MER2_type 0 236 4 240 359 63 0 chr5 33149034 33149176 -169936356 - MIR SINE MIR -111 151 1 698 161 36 0 chr5 33149360 33149472 -169936060 + FRAM SINE Alu 43 158 -18 22 70 0 0 chr5 33149482 33149525 -169936007 + AT_rich Low_complexity Low_complexity 1 43 0 851 153 0 0 chr5 33149525 33149643 -169935889 - FLAM_C SINE Alu -25 118 1 250 316 92 0 chr5 33149822 33149898 -169935634 - L2 LINE L2 -2 3270 3188 2765 32 0 0 chr5 33150051 33150359 -169935173 + AluY SINE Alu 1 308 -3 1995 127 3 34 chr5 33150386 33150708 -169934824 + AluJo SINE Alu 1 312 0 2473 55 0 0 chr5 33151012 33151332 -169934200 + AluY SINE Alu 1 320 0 237 105 0 0 chr5 33151432 33151470 -169934062 + L1MA3 LINE L1 6267 6304 -1 2477 64 0 0 chr5 33151477 33151772 -169933760 + AluY SINE Alu 1 295 -16 2597 53 0 0 chr5 33152063 33152363 -169933169 + AluY SINE Alu 1 300 -11 1749 118 91 8 chr5 33152660 33152923 -169932609 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr5 33152930 33152951 -169932581 + AT_rich Low_complexity Low_complexity 1 21 0 540 224 73 44 chr5 33153505 33153662 -169931870 - MER106B DNA MER1_type 0 1059 908 2369 63 3 10 chr5 33153662 33153961 -169931571 - AluY SINE Alu -14 297 1 540 224 73 44 chr5 33153961 33154041 -169931491 - MER106B DNA MER1_type -151 908 2 29 47 0 0 chr5 33154095 33154138 -169931394 + AT_rich Low_complexity Low_complexity 1 43 0 2159 126 7 0 chr5 33154164 33154465 -169931067 - AluSx SINE Alu -6 306 4 2147 133 0 0 chr5 33154569 33154870 -169930662 + AluSx SINE Alu 1 301 -11 270 269 39 0 chr5 33154958 33155036 -169930496 + L2 LINE L2 3191 3271 -1 2075 121 31 0 chr5 33155803 33156092 -169929440 + AluSq SINE Alu 1 298 -15 2385 108 0 0 chr5 33156435 33156742 -169928790 - AluSq SINE Alu -6 307 1 1803 141 27 37 chr5 33156939 33157236 -169928296 + AluJo SINE Alu 1 294 -18 236 200 235 0 chr5 33157545 33157630 -169927902 - MARNA DNA Mariner -62 524 420 862 119 13 50 chr5 33158106 33158265 -169927267 + FRAM SINE Alu 1 40 0 1869 137 3 31 chr5 33158265 33158557 -169926975 + AluJb SINE Alu 4 287 -25 268 306 38 25 chr5 33158791 33158951 -169926581 + MARNA DNA Mariner 302 463 -123 24 67 0 0 chr5 33159368 33159413 -169926119 + AT_rich Low_complexity Low_complexity 1 45 0 544 191 296 32 chr5 33159420 33159640 -169925892 + L1ME3A LINE L1 5810 6087 -83 563 158 105 18 chr5 33159939 33160053 -169925479 + FLAM_A SINE Alu 5 128 -5 1494 93 69 5 chr5 33160452 33160668 -169924864 + MER30 DNA MER1_type 1 230 0 2334 92 0 3 chr5 33160936 33161242 -169924290 + AluSx SINE Alu 1 305 -7 2298 94 0 7 chr5 33161683 33161992 -169923540 + AluSc SINE Alu 1 307 -2 1078 65 79 0 chr5 33161992 33162131 -169923401 + AluSp SINE Alu 134 283 -30 42 20 0 0 chr5 33163028 33163077 -169922455 + GC_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr5 33163202 33163227 -169922305 + GC_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 33164511 33164536 -169920996 + AT_rich Low_complexity Low_complexity 1 25 0 2647 43 3 0 chr5 33164760 33165064 -169920468 - AluY SINE Alu -6 305 1 1086 152 11 0 chr5 33165168 33165346 -169920186 + FRAM SINE Alu 1 172 -4 2614 40 0 0 chr5 33165348 33165644 -169919888 + AluY SINE Alu 1 296 -15 810 221 55 3 chr5 33165759 33165952 -169919580 + MLT1F1 LTR MaLR 7 251 -298 2140 81 3 50 chr5 33166126 33166298 -169919234 - AluSx SINE Alu 0 307 128 219 36 0 0 chr5 33166298 33166326 -169919206 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2394 44 25 0 chr5 33166326 33166601 -169918931 - AluSp SINE Alu -30 283 2 2140 81 3 50 chr5 33166601 33166748 -169918784 - AluSx SINE Alu -177 130 1 298 167 106 15 chr5 33167079 33167145 -169918387 + LTR16A1 LTR ERVL 384 455 -2 331 234 43 0 chr5 33167147 33167241 -169918291 - MIR SINE MIR -118 144 47 311 357 14 21 chr5 33167247 33167387 -169918145 - L2 LINE L2 0 3272 3134 1737 120 51 55 chr5 33167754 33168046 -169917486 - AluJb SINE Alu -21 291 1 394 314 119 31 chr5 33168219 33168537 -169916995 - L2 LINE L2 -694 2620 2275 2345 92 0 19 chr5 33168546 33168861 -169916671 - AluSc SINE Alu 0 309 1 3344 183 57 28 chr5 33169005 33169248 -169916284 - L1MD2 LINE L1 -23 6336 6102 1869 154 13 19 chr5 33169248 33169560 -169915972 + AluJo SINE Alu 1 310 -2 3344 183 57 28 chr5 33169560 33169945 -169915587 - L1MD2 LINE L1 -257 6102 5682 2171 115 3 0 chr5 33169945 33170259 -169915273 - AluSx SINE Alu 0 312 1 3344 183 57 28 chr5 33170259 33170349 -169915183 - L1MD2 LINE L1 -677 5682 5596 363 135 0 0 chr5 33170415 33170467 -169915065 - L1MD2 LINE L1 -767 5592 5541 1504 103 42 0 chr5 33170615 33170829 -169914703 + MSTC LTR MaLR 1 223 -205 272 231 29 4 chr5 33170831 33170935 -169914597 - MIR SINE MIR -104 158 15 2055 218 77 61 chr5 33171138 33171305 -169914227 + MLT1E1 LTR MaLR 5 168 -486 2360 80 0 0 chr5 33171305 33171592 -169913940 + AluY SINE Alu 5 291 -20 2055 218 77 61 chr5 33171592 33171642 -169913890 + MLT1E1 LTR MaLR 168 216 -438 1779 163 108 44 chr5 33171642 33171697 -169913835 + MSTB1 LTR MaLR 1 51 -381 2060 142 0 22 chr5 33171697 33172014 -169913518 + AluJb SINE Alu 1 310 -2 1779 163 108 44 chr5 33172014 33172364 -169913168 + MSTB1 LTR MaLR 51 432 0 2055 218 77 61 chr5 33172364 33172770 -169912762 + MLT1E1 LTR MaLR 216 639 -15 380 220 110 0 chr5 33172770 33172888 -169912644 + L1MC4a LINE L1 2258 2388 -3758 2457 79 7 0 chr5 33172907 33173211 -169912321 - AluY SINE Alu -5 306 1 1359 179 38 60 chr5 33173212 33173472 -169912060 + L1MC4a LINE L1 4837 5101 -1045 2108 153 0 3 chr5 33173472 33173785 -169911747 - AluSx SINE Alu 0 312 1 1359 179 38 60 chr5 33173785 33173875 -169911657 + L1MC4a LINE L1 5101 5181 -965 2321 102 0 0 chr5 33173875 33174170 -169911362 + AluSg1 SINE Alu 1 295 -14 1359 179 38 60 chr5 33174170 33174186 -169911346 + L1MC4a LINE L1 5181 5196 -950 2299 125 0 0 chr5 33174194 33174506 -169911026 + AluSx SINE Alu 1 312 0 367 226 24 0 chr5 33174516 33174600 -169910932 + L1MC4a LINE L1 5171 5256 -890 2350 130 15 44 chr5 33174600 33174800 -169910732 + MSTB LTR MaLR 1 184 -242 2959 10 0 0 chr5 33174800 33175113 -169910419 + AluYb8 SINE Alu 1 313 -5 2350 130 15 44 chr5 33175113 33175320 -169910212 + MSTB LTR MaLR 184 396 -30 1086 172 0 20 chr5 33175321 33175519 -169910013 - AluJb SINE Alu -3 309 116 743 168 0 0 chr5 33175590 33175703 -169909829 + FLAM_C SINE Alu 21 133 -10 1942 129 17 20 chr5 33175868 33176162 -169909370 + AluJb SINE Alu 5 297 -15 2772 171 9 42 chr5 33176207 33176236 -169909296 + L1 LINE L1 4452 4480 -1666 2317 84 0 7 chr5 33176236 33176540 -169908992 - AluSg SINE Alu 0 302 1 1960 133 24 7 chr5 33176542 33176836 -169908696 - AluSx SINE Alu -13 299 1 2772 171 9 42 chr5 33176836 33177380 -169908152 + L1 LINE L1 4481 5010 -1136 248 219 62 0 chr5 33177383 33177447 -169908085 + L1MB7 LINE L1 6110 6177 -7 2132 122 3 0 chr5 33177991 33178286 -169907246 + AluSg SINE Alu 1 296 -14 2234 97 0 4 chr5 33178575 33178890 -169906642 - AluSx SINE Alu 0 318 5 2429 79 0 0 chr5 33179058 33179362 -169906170 + AluY SINE Alu 7 310 -1 1569 264 114 20 chr5 33179484 33179977 -169905555 - MLT1E LTR MaLR -52 541 3 2297 106 0 0 chr5 33180073 33180366 -169905166 - AluSx SINE Alu -19 293 1 860 249 175 25 chr5 33180424 33180818 -169904714 - MLT1H LTR MaLR -6 543 91 2273 120 0 0 chr5 33181042 33181351 -169904181 - AluSx SINE Alu -3 309 1 1698 271 56 4 chr5 33181401 33181866 -169903666 + L1MC4a LINE L1 5479 5967 -1841 2401 82 0 7 chr5 33181873 33182165 -169903367 - AluSg SINE Alu -20 290 1 24 67 0 0 chr5 33182319 33182364 -169903168 + AT_rich Low_complexity Low_complexity 1 45 0 2448 85 0 0 chr5 33182370 33182676 -169902856 - AluSc SINE Alu -3 306 1 908 142 49 59 chr5 33182688 33182918 -169902614 - L1MB8 LINE L1 -1 6183 5938 644 26 0 0 chr5 33183498 33183576 -169901956 - L1PA2 LINE L1 -3 6152 6075 2594 61 0 3 chr5 33184109 33184421 -169901111 + AluY SINE Alu 1 311 0 2478 94 0 0 chr5 33184817 33185125 -169900407 + AluSx SINE Alu 1 308 -4 361 235 20 0 chr5 33185301 33185399 -169900133 - L1MC4a LINE L1 -1897 5911 5812 299 196 0 0 chr5 33185401 33185452 -169900080 - L1PB4 LINE L1 -12 6144 6094 294 278 95 15 chr5 33185453 33185625 -169899907 - L1MB8 LINE L1 -477 5828 5638 1823 150 0 11 chr5 33185668 33185979 -169899553 - AluJb SINE Alu 0 308 1 2357 91 0 7 chr5 33186054 33186361 -169899171 - AluSx SINE Alu -7 305 1 2171 107 10 3 chr5 33186644 33186954 -169898578 + AluSx SINE Alu 1 312 0 2356 96 0 0 chr5 33187063 33187364 -169898168 - AluSq SINE Alu -12 301 1 22 0 0 0 chr5 33187547 33187569 -169897963 + AT_rich Low_complexity Low_complexity 1 22 0 2012 125 0 16 chr5 33187853 33188156 -169897376 - AluSx SINE Alu -12 300 3 240 35 0 0 chr5 33188649 33188678 -169896854 + (TG)n Simple_repeat Simple_repeat 2 30 0 2487 72 3 0 chr5 33188741 33189048 -169896484 - AluSx SINE Alu -4 308 1 416 119 13 0 chr5 33189159 33189235 -169896297 - L1P5 LINE L1 -703 5451 5375 269 234 0 16 chr5 33189230 33189294 -169896238 + L1ME4a LINE L1 5598 5660 -461 * 351 0 0 0 chr5 33189294 33189333 -169896199 + (CA)n Simple_repeat Simple_repeat 2 40 0 316 269 83 0 chr5 33189448 33189556 -169895976 + L1ME4a LINE L1 6003 6119 -2 409 217 5 13 chr5 33189689 33189779 -169895753 + L1MC4a LINE L1 6699 6776 -1032 438 128 51 0 chr5 33190984 33191062 -169894470 + AluJ/FRAM SINE Alu 231 312 0 280 227 0 30 chr5 33192263 33192329 -169893203 + MIR SINE MIR 127 190 -72 192 77 0 0 chr5 33193093 33193119 -169892413 + (A)n Simple_repeat Simple_repeat 1 26 0 1324 133 39 29 chr5 33193418 33193697 -169891835 - AluY SINE Alu -29 282 1 2548 241 65 16 chr5 33193697 33194554 -169890978 - L1MC4 LINE L1 -76 7966 7068 491 17 17 0 chr5 33194577 33194637 -169890895 - AluSc SINE Alu -14 295 235 1644 128 0 0 chr5 33194750 33194977 -169890555 - AluSx SINE Alu -85 227 1 243 224 0 52 chr5 33195422 33195480 -169890052 + MIR SINE MIR 28 82 -180 342 217 224 42 chr5 33195607 33195750 -169889782 + MIR SINE MIR 31 199 -63 33 43 0 0 chr5 33197927 33197974 -169887558 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr5 33198265 33198293 -169887239 + AT_rich Low_complexity Low_complexity 1 28 0 1706 141 4 23 chr5 33198777 33199040 -169886492 - AluSx SINE Alu -54 258 1 1334 140 169 33 chr5 33199040 33199261 -169886271 - MLT1A1 LTR MaLR -55 310 44 2215 92 6 16 chr5 33199261 33199576 -169885956 - AluSp SINE Alu -1 312 1 1334 140 169 33 chr5 33199576 33199626 -169885906 - MLT1A1 LTR MaLR -321 44 2 257 129 145 32 chr5 33199711 33199774 -169885758 - L1MB7 LINE L1 0 6178 6110 355 181 105 19 chr5 33199779 33199884 -169885648 + FLAM_C SINE Alu 18 131 -2 252 222 210 57 chr5 33200200 33200376 -169885156 + L1MC4a LINE L1 5713 5915 -1893 1087 214 12 20 chr5 33201895 33202147 -169883385 + AluJo SINE Alu 51 300 -12 2139 102 3 48 chr5 33202223 33202538 -169882994 - AluSg SINE Alu -9 301 1 1664 182 120 8 chr5 33202688 33203072 -169882460 + Charlie4a DNA MER1_type 2 428 -80 1140 328 107 66 chr5 33203198 33204660 -169880872 - L1MC4a LINE L1 -847 6961 5439 1489 128 3 42 chr5 33204676 33204964 -169880568 - AluSx SINE Alu -35 277 1 2383 79 0 13 chr5 33205201 33205506 -169880026 - AluSq SINE Alu -12 301 1 2126 115 3 16 chr5 33205743 33206055 -169879477 - AluSx SINE Alu 0 312 5 831 177 63 32 chr5 33206211 33206369 -169879163 - AluJo/FRAM SINE Alu -19 293 131 2211 116 3 10 chr5 33206371 33206681 -169878851 - AluSg SINE Alu -1 309 2 1778 126 9 52 chr5 33207054 33207380 -169878152 - AluSq SINE Alu -1 312 1 4662 95 5 0 chr5 33207380 33207982 -169877550 - THE1A-int LTR MaLR -719 861 257 250 87 0 87 chr5 33207971 33208017 -169877515 - THE1A-int LTR MaLR -1516 64 23 * 263 113 19 57 chr5 33208057 33208110 -169877422 - THE1A LTR MaLR -2 353 303 198 167 0 0 chr5 33208578 33208614 -169876918 + GA-rich Low_complexity Low_complexity 2 37 0 3468 233 43 45 chr5 33208614 33208756 -169876776 + L1MC4 LINE L1 6916 7057 -985 2247 86 3 17 chr5 33208756 33209058 -169876474 + AluSg SINE Alu 1 298 -12 3468 233 43 45 chr5 33209058 33209957 -169875575 + L1MC4 LINE L1 7057 7956 -86 2252 105 0 13 chr5 33209957 33210261 -169875271 + AluY SINE Alu 1 300 -11 3468 233 43 45 chr5 33210261 33210343 -169875189 + L1MC4 LINE L1 7956 8037 -5 2171 131 7 0 chr5 33210766 33211071 -169874461 - AluSx SINE Alu -5 307 1 27 0 0 0 chr5 33262351 33262378 -169823154 + AT_rich Low_complexity Low_complexity 1 27 0 183 80 0 0 chr5 33264838 33264863 -169820669 + (A)n Simple_repeat Simple_repeat 1 25 0 383 55 0 18 chr5 33265401 33265456 -169820076 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 24 0 0 0 chr5 33265838 33265862 -169819670 + AT_rich Low_complexity Low_complexity 1 24 0 186 156 0 0 chr5 33266432 33266477 -169819055 + G-rich Low_complexity Low_complexity 1 45 0 238 330 0 0 chr5 33270816 33270913 -169814619 + G-rich Low_complexity Low_complexity 1 97 0 198 91 0 0 chr5 33271049 33271082 -169814450 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 33271405 33271430 -169814102 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr5 33279208 33279234 -169806298 + (G)n Simple_repeat Simple_repeat 1 26 0 284 145 0 16 chr5 33291072 33291134 -169794398 + (CTG)n Simple_repeat Simple_repeat 2 62 0 234 0 0 0 chr5 33293099 33293125 -169792407 + (G)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 33294703 33294724 -169790808 + GC_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 33298444 33298470 -169787062 + (A)n Simple_repeat Simple_repeat 1 26 0 1456 52 0 0 chr5 33302723 33302895 -169782637 - AluSx SINE Alu -140 172 1 226 150 38 113 chr5 33302895 33302975 -169782557 + MSTC LTR MaLR 355 428 0 1031 132 23 11 chr5 33302977 33303151 -169782381 + LTR1 LTR ERV1 48 223 -562 1875 120 3 19 chr5 33303151 33303460 -169782072 + AluSg SINE Alu 1 304 -6 3232 102 36 24 chr5 33303654 33304156 -169781376 + LTR1 LTR ERV1 278 785 0 1827 151 0 22 chr5 33304215 33304532 -169781000 - AluSx SINE Alu 0 312 3 1769 115 38 7 chr5 33308044 33308331 -169777201 + AluSg SINE Alu 1 296 -14 441 243 88 15 chr5 33308891 33309027 -169776505 - MIR SINE MIR -113 149 4 3124 141 2 80 chr5 33309082 33309346 -169776186 + LTR26B LTR ERV1 1 284 -247 354 23 0 0 chr5 33309346 33309389 -169776143 + (CA)n Simple_repeat Simple_repeat 2 44 0 3124 141 2 80 chr5 33309389 33309517 -169776015 + LTR26B LTR ERV1 284 336 -195 1523 204 11 0 chr5 33309517 33309801 -169775731 + AluJo SINE Alu 1 287 -25 3124 141 2 80 chr5 33309801 33309983 -169775549 + LTR26B LTR ERV1 336 531 0 293 245 0 142 chr5 33310204 33310272 -169775260 + MER45 DNA AcHobo 1 50 -903 1775 138 22 26 chr5 33310272 33310584 -169774948 + AluJo SINE Alu 1 311 -1 293 245 0 142 chr5 33310584 33310621 -169774911 + MER45 DNA AcHobo 50 91 -862 292 89 111 0 chr5 33310618 33310663 -169774869 - AluSp/q SINE Alu -27 276 227 * 2110 154 144 148 chr5 33310820 33311003 -169774529 - MER57-int LTR ERV1 -4070 3467 3285 1895 142 0 7 chr5 33311003 33311298 -169774234 - AluSg SINE Alu -17 293 1 2110 154 144 148 chr5 33311298 33311385 -169774147 - MER57-int LTR ERV1 -4252 3285 3199 180 253 23 115 chr5 33311385 33311472 -169774060 - L3b LINE CR1 -208 1375 1297 2110 154 144 148 chr5 33311472 33311803 -169773729 - MER57-int LTR ERV1 -4338 3199 2782 870 126 13 33 chr5 33311804 33311955 -169773577 - MER57B-int LTR ERV1 -3933 2013 1866 * 5215 164 33 14 chr5 33311954 33312447 -169773085 - MER57B-int LTR ERV1 -5166 2371 1852 2086 76 45 10 chr5 33312447 33312738 -169772794 + AluSg SINE Alu 1 301 -9 5215 164 33 14 chr5 33312738 33313121 -169772411 - MER57B-int LTR ERV1 -5685 1852 1478 1347 91 0 6 chr5 33313149 33313325 -169772207 - MER57B-int LTR ERV1 -6570 967 793 * 2550 141 50 21 chr5 33313323 33313743 -169771789 - MER57B-int LTR ERV1 -6860 677 246 981 95 7 7 chr5 33313750 33313898 -169771634 - MER57B LTR ERV1 0 434 287 1816 146 91 40 chr5 33313905 33314234 -169771298 + MER41-int LTR ERV1 382 727 -5219 1309 144 0 0 chr5 33314233 33314421 -169771111 + MER41-int LTR ERV1 1404 1591 -4355 * 717 126 0 18 chr5 33314419 33314530 -169771002 + MER41-int LTR ERV1 2477 2585 -4952 * 21 0 0 0 chr5 33315121 33315142 -169770390 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr5 33316050 33316077 -169769455 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 33316631 33316659 -169768873 + AT_rich Low_complexity Low_complexity 1 28 0 583 295 60 0 chr5 33316659 33316825 -169768707 - MIR SINE MIR -42 220 45 1187 122 0 0 chr5 33320233 33320397 -169765135 + AluSq SINE Alu 133 296 -17 1892 130 13 29 chr5 33320684 33320991 -169764541 - AluSx SINE Alu -10 302 1 22 35 0 0 chr5 33321546 33321575 -169763957 + AT_rich Low_complexity Low_complexity 1 29 0 2239 82 20 3 chr5 33322059 33322362 -169763170 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr5 33323161 33323182 -169762350 + AT_rich Low_complexity Low_complexity 1 21 0 264 159 89 33 chr5 33324695 33324785 -169760747 - L1MC/D LINE L1 -378 5800 5715 2052 93 7 17 chr5 33325019 33325308 -169760224 + AluSx SINE Alu 2 287 -25 1358 98 221 4 chr5 33325530 33325765 -169759767 + AluSg1 SINE Alu 2 287 -22 284 102 20 0 chr5 33325765 33325814 -169759718 + (GA)n Simple_repeat Simple_repeat 1 50 0 605 110 0 0 chr5 33325828 33325919 -169759613 - AluY SINE Alu -5 306 216 4307 131 53 36 chr5 33326020 33326354 -169759178 + MER41B-int LTR ERV1 2867 3194 -4343 1729 139 34 4 chr5 33326354 33326621 -169758911 + AluSx SINE Alu 2 276 -36 4307 131 53 36 chr5 33326621 33326834 -169758698 + MER41B-int LTR ERV1 3194 3402 -4135 1978 136 3 16 chr5 33326834 33326970 -169758562 + AluSx SINE Alu 1 137 -175 2162 107 0 7 chr5 33326970 33327270 -169758262 + AluSc SINE Alu 1 298 -11 1978 136 3 16 chr5 33327270 33327442 -169758090 + AluSx SINE Alu 137 305 -7 2086 116 3 0 chr5 33327442 33327734 -169757798 + AluSc SINE Alu 1 293 -16 4307 131 53 36 chr5 33327734 33327942 -169757590 + MER41B-int LTR ERV1 3401 3637 -3900 705 94 31 94 chr5 33327930 33327986 -169757546 + MER41B-int LTR ERV1 3300 3358 -2588 * 676 19 65 0 chr5 33327986 33328094 -169757438 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 2223 62 0 21 chr5 33328094 33328382 -169757150 - AluY SINE Alu -25 286 5 705 94 31 94 chr5 33328382 33328483 -169757049 + MER41B-int LTR ERV1 3356 3448 -2498 4571 108 18 5 chr5 33328487 33328507 -169757025 + MER41B-int LTR ERV1 2415 2433 -3513 2234 102 0 6 chr5 33328507 33328820 -169756712 - AluSq SINE Alu -2 311 1 4571 108 18 5 chr5 33328820 33329517 -169756015 + MER41B-int LTR ERV1 2433 4752 -1194 4858 86 8 24 chr5 33329522 33330224 -169755308 + MER41B-int LTR ERV1 5256 5946 0 4007 130 36 7 chr5 33330224 33330841 -169754691 + MER41B LTR ERV1 1 635 0 435 213 65 101 chr5 33331319 33331488 -169754044 - MER102b DNA MER1_type -10 331 169 2026 136 3 0 chr5 33331490 33331798 -169753734 - AluSx SINE Alu -3 309 1 2043 125 10 0 chr5 33332121 33332424 -169753108 + AluSx SINE Alu 1 306 -6 1493 137 15 8 chr5 33332727 33332989 -169752543 - AluSq SINE Alu -49 264 1 813 206 130 132 chr5 33332990 33333529 -169752003 + MER45C DNA AcHobo 96 633 -320 313 192 0 0 chr5 33333525 33333577 -169751955 + MER45C DNA AcHobo 900 951 -2 * 484 225 80 112 chr5 33333593 33333702 -169751830 + MIR SINE MIR 78 180 -82 3169 60 17 70 chr5 33333702 33333737 -169751795 - MLT2A1 LTR ERVL 0 444 409 396 59 0 0 chr5 33333737 33333788 -169751744 + (TA)n Simple_repeat Simple_repeat 1 51 0 3169 60 17 70 chr5 33333788 33334221 -169751311 - MLT2A1 LTR ERVL -35 409 1 484 225 80 112 chr5 33334221 33334298 -169751234 + MIR SINE MIR 180 258 -4 2275 100 0 0 chr5 33334477 33334787 -169750745 - AluY SINE Alu -1 310 1 1770 147 3 46 chr5 33334789 33335095 -169750437 - AluJb SINE Alu -19 293 1 7121 179 95 32 chr5 33335237 33336697 -169748835 - MER52A LTR ERV1 0 1755 204 286 220 0 0 chr5 33337054 33337113 -169748419 - MER52A LTR ERV1 -1696 59 1 1419 168 28 48 chr5 33337197 33337278 -169748254 + MLT1A1 LTR MaLR 1 82 -283 2286 63 70 0 chr5 33337278 33337564 -169747968 + AluSq SINE Alu 1 306 -7 1419 168 28 48 chr5 33337564 33337703 -169747829 + MLT1A1 LTR MaLR 82 216 -149 3478 92 4 48 chr5 33337703 33338142 -169747390 - LOR1a LTR ERV1 0 497 83 1887 137 3 48 chr5 33338142 33338457 -169747075 + AluJb SINE Alu 9 309 -3 3478 92 4 48 chr5 33338457 33338537 -169746995 - LOR1a LTR ERV1 -414 83 1 1419 168 28 48 chr5 33338537 33338606 -169746926 + MLT1A1 LTR MaLR 216 285 -80 1809 98 0 12 chr5 33338745 33338990 -169746542 - AluSq SINE Alu -71 242 1 847 170 157 0 chr5 33339079 33339238 -169746294 + MER8 DNA MER2_type 1 184 -55 25 51 0 0 chr5 33339731 33339770 -169745762 + AT_rich Low_complexity Low_complexity 1 39 0 412 108 40 14 chr5 33340072 33340146 -169745386 + L1PB3 LINE L1 6070 6145 -9 490 153 194 14 chr5 33340358 33340502 -169745030 + MER104 DNA Tc2 6 175 -5 644 129 86 9 chr5 33340637 33340753 -169744779 + FLAM_C SINE Alu 1 125 -8 590 173 40 1 chr5 33341897 33342012 -169743520 - L1MB7 LINE L1 -242 5942 5825 804 155 0 0 chr5 33342400 33342516 -169743016 - AluJo/FRAM SINE Alu -16 296 181 380 172 0 0 chr5 33342518 33342576 -169742956 + AluJo/FRAM SINE Alu 192 249 -53 825 163 71 0 chr5 33342578 33342719 -169742813 - AluJo SINE Alu -143 169 19 956 169 23 23 chr5 33343721 33343893 -169741639 - FAM SINE Alu 0 175 4 1395 174 28 56 chr5 33343908 33343991 -169741541 - AluJo SINE Alu -12 300 216 2229 107 0 3 chr5 33343991 33344331 -169741201 + AluSq SINE Alu 1 339 0 1395 174 28 56 chr5 33344331 33344533 -169740999 - AluJo SINE Alu -96 216 21 271 146 0 0 chr5 33344533 33344574 -169740958 - AluJo SINE Alu -261 41 1 275 207 52 17 chr5 33344746 33344804 -169740728 - MIR SINE MIR -109 99 40 251 240 93 13 chr5 33345002 33345077 -169740455 + L1ME LINE L1 5515 5595 -526 2015 122 22 4 chr5 33345097 33345375 -169740157 - AluSp SINE Alu -30 283 1 378 294 15 15 chr5 33345561 33345697 -169739835 - MIR SINE MIR -1 261 126 966 214 157 5 chr5 33346286 33346325 -169739207 - L1MB5 LINE L1 -1 6183 6151 306 0 0 0 chr5 33346325 33346359 -169739173 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1678 191 0 20 chr5 33346363 33346657 -169738875 + AluJb SINE Alu 1 288 -24 966 214 157 5 chr5 33346657 33346927 -169738605 - L1MB5 LINE L1 -35 6149 5838 800 167 8 0 chr5 33346933 33347065 -169738467 - FLAM_A SINE Alu 0 133 1 399 21 0 0 chr5 33347150 33347198 -169738334 + (GA)n Simple_repeat Simple_repeat 1 48 0 228 67 0 0 chr5 33347206 33347236 -169738296 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1620 191 0 24 chr5 33347236 33347516 -169738016 - AluJo SINE Alu -37 275 1 1632 213 0 0 chr5 33347927 33348218 -169737314 + AluJo SINE Alu 1 291 -21 649 151 134 0 chr5 33349137 33349256 -169736276 + L1MC1 LINE L1 6138 6272 -61 677 181 8 24 chr5 33349258 33349385 -169736147 + Tigger2a DNA MER2_type 3 127 -307 2118 144 0 6 chr5 33349390 33349702 -169735830 + AluSx SINE Alu 1 310 -2 2071 125 0 0 chr5 33349952 33350232 -169735300 + AluSg SINE Alu 1 280 -30 2022 125 11 0 chr5 33351063 33351379 -169734153 + AluSx SINE Alu 1 319 0 204 97 0 0 chr5 33351540 33351571 -169733961 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 279 291 103 41 chr5 33351759 33352129 -169733403 + L1M4 LINE L1 3580 3977 -2169 1613 172 15 4 chr5 33352367 33352635 -169732897 - AluJb SINE Alu -30 282 12 2269 86 7 7 chr5 33352687 33352979 -169732553 - AluSg SINE Alu -16 294 3 1480 128 150 11 chr5 33353205 33353471 -169732061 + AluSg SINE Alu 2 304 -6 1001 145 52 17 chr5 33353560 33353732 -169731800 + AluSx SINE Alu 2 179 -133 1357 174 51 0 chr5 33353834 33354087 -169731445 + L1MB7 LINE L1 5919 6184 0 1520 151 37 74 chr5 33354143 33354467 -169731065 - AluJb SINE Alu 0 312 1 21 36 0 0 chr5 33354486 33354514 -169731018 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 33355152 33355178 -169730354 + AT_rich Low_complexity Low_complexity 1 26 0 415 243 42 13 chr5 33355372 33355562 -169729970 + MIR SINE MIR 13 262 0 741 233 157 38 chr5 33356172 33356459 -169729073 + L1MD2 LINE L1 5899 6219 -140 1947 134 30 13 chr5 33357004 33357302 -169728230 + AluSx SINE Alu 1 303 -9 1196 173 25 38 chr5 33357803 33358040 -169727492 + AluJo SINE Alu 1 234 -78 698 187 0 0 chr5 33358040 33358163 -169727369 + FLAM_C SINE Alu 15 137 -6 2046 218 127 17 chr5 33358163 33358690 -169726842 + L1MB7 LINE L1 5576 6160 -24 2331 89 20 3 chr5 33358945 33359249 -169726283 - AluSg SINE Alu -1 309 1 1362 97 116 5 chr5 33359494 33359701 -169725831 + MER30 DNA MER1_type 1 230 0 1227 172 161 0 chr5 33359710 33359977 -169725555 - AluJb SINE Alu -2 310 1 26 30 0 0 chr5 33359986 33360019 -169725513 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr5 33360195 33360233 -169725299 + AT_rich Low_complexity Low_complexity 1 38 0 1958 64 113 0 chr5 33360273 33360539 -169724993 - AluY SINE Alu -15 296 1 2060 138 10 0 chr5 33360544 33360842 -169724690 - AluSx SINE Alu -11 301 1 361 284 55 28 chr5 33360901 33361119 -169724413 + L1M4 LINE L1 4724 4947 -1199 2211 120 0 0 chr5 33361352 33361652 -169723880 + AluSx SINE Alu 1 300 -12 1321 138 146 16 chr5 33361662 33361916 -169723616 + AluJb SINE Alu 1 287 -25 2534 48 0 23 chr5 33362199 33362509 -169723023 + AluY SINE Alu 1 303 -8 944 132 220 0 chr5 33364812 33364994 -169720538 + MER46A DNA MER2_type 15 236 0 1954 134 17 10 chr5 33365105 33365396 -169720136 + AluJb SINE Alu 1 293 -19 200 273 133 35 chr5 33365403 33365546 -169719986 - MIR SINE MIR -6 256 100 1644 175 30 10 chr5 33365849 33366152 -169719380 - AluJo SINE Alu -3 309 1 1872 129 7 11 chr5 33366155 33366435 -169719097 - AluSx SINE Alu -13 299 21 2312 90 10 3 chr5 33366633 33366934 -169718598 + AluSq SINE Alu 1 303 -10 191 272 44 110 chr5 33366973 33367036 -169718496 - MER5A DNA MER1_type 0 189 138 762 174 8 0 chr5 33367036 33367157 -169718375 + FLAM_C SINE Alu 1 122 -11 191 272 44 110 chr5 33367157 33367229 -169718303 - MER5A DNA MER1_type -51 138 63 262 239 37 83 chr5 33367449 33367558 -169717974 - L1MC4a LINE L1 -1875 5933 5830 404 121 30 0 chr5 33367629 33367694 -169717838 + AluSp/q SINE Alu 232 298 -15 466 175 25 0 chr5 33367694 33367774 -169717758 + AluS SINE Alu 1 82 -231 2595 49 0 16 chr5 33368067 33368375 -169717157 + AluY SINE Alu 1 303 -8 372 152 0 0 chr5 33368439 33368505 -169717027 + (CA)n Simple_repeat Simple_repeat 2 67 0 605 254 112 9 chr5 33368540 33368772 -169716760 - MIR SINE MIR -5 257 2 359 292 84 40 chr5 33369609 33369811 -169715721 - MIR SINE MIR 0 262 52 2217 121 3 0 chr5 33370192 33370490 -169715042 + AluSx SINE Alu 1 299 -13 1882 132 57 10 chr5 33371008 33371304 -169714228 + AluSx SINE Alu 1 310 -2 221 0 0 33 chr5 33371346 33371376 -169714156 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2298 86 0 23 chr5 33371836 33372138 -169713394 + AluSg SINE Alu 1 295 -15 216 278 6 107 chr5 33372505 33372674 -169712858 - MIR SINE MIR 0 262 111 198 0 0 0 chr5 33373247 33373269 -169712263 + (A)n Simple_repeat Simple_repeat 1 22 0 2175 93 4 4 chr5 33373438 33373717 -169711815 + AluSc SINE Alu 1 279 -30 186 43 0 0 chr5 33373720 33373743 -169711789 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 2311 92 7 0 chr5 33374488 33374782 -169710750 - AluSg SINE Alu -14 296 1 188 239 0 159 chr5 33374954 33375019 -169710513 + L2 LINE L2 3219 3260 -53 2512 67 3 0 chr5 33375019 33375316 -169710216 + AluSp SINE Alu 1 298 -15 188 239 0 159 chr5 33375316 33375363 -169710169 + L2 LINE L2 3260 3313 0 469 290 136 32 chr5 33375573 33375794 -169709738 + MIR SINE MIR 19 262 0 297 236 56 90 chr5 33376078 33376222 -169709310 + MIR3 SINE MIR 42 180 -28 293 237 53 26 chr5 33376417 33376531 -169709001 + L1ME4a LINE L1 5843 5959 -162 2349 97 0 0 chr5 33377439 33377737 -169707795 + AluSg SINE Alu 1 298 -12 2345 88 0 14 chr5 33378003 33378300 -169707232 - AluSc SINE Alu -16 293 1 6254 104 42 47 chr5 33378724 33379060 -169706472 + L1MA3 LINE L1 5101 5437 -868 897 56 0 0 chr5 33379060 33379167 -169706365 + U6 snRNA snRNA 1 107 0 6254 104 42 47 chr5 33379167 33379431 -169706101 + L1MA3 LINE L1 5437 5701 -604 1625 186 45 3 chr5 33379431 33379721 -169705811 + AluJo SINE Alu 1 302 -10 6254 104 42 47 chr5 33379721 33380268 -169705264 + L1MA3 LINE L1 5701 6247 -58 2169 87 62 3 chr5 33380268 33380556 -169704976 - AluSx SINE Alu -7 305 1 6254 104 42 47 chr5 33380556 33380610 -169704922 + L1MA3 LINE L1 6247 6300 -5 801 265 191 28 chr5 33381019 33381500 -169704032 + L2 LINE L2 2749 3312 -1 29 70 0 0 chr5 33382096 33382153 -169703379 + GC_rich Low_complexity Low_complexity 1 57 0 2309 89 0 49 chr5 33382854 33383034 -169702498 - AluSq SINE Alu -3 310 123 315 0 0 0 chr5 33383034 33383069 -169702463 + (TG)n Simple_repeat Simple_repeat 2 36 0 2106 91 0 0 chr5 33383069 33383332 -169702200 - AluSg SINE Alu -42 268 6 2309 89 0 49 chr5 33383332 33383476 -169702056 - AluSq SINE Alu -188 125 1 1964 135 20 3 chr5 33383642 33383946 -169701586 + AluSx SINE Alu 3 311 -1 2391 83 10 0 chr5 33384701 33385003 -169700529 + AluSp SINE Alu 1 305 -8 2049 145 0 19 chr5 33385184 33385501 -169700031 + AluJo SINE Alu 1 311 -1 2178 115 6 10 chr5 33385851 33386163 -169699369 + AluSx SINE Alu 1 311 -1 3065 164 66 22 chr5 33386175 33386357 -169699175 - L1MB7 LINE L1 -22 6162 5989 2306 107 7 0 chr5 33386357 33386667 -169698865 - AluSx SINE Alu 0 312 1 3065 164 66 22 chr5 33386667 33387074 -169698458 - L1MB7 LINE L1 -195 5989 5547 1942 125 14 7 chr5 33387780 33388075 -169697457 - AluSx SINE Alu -10 302 6 265 309 24 0 chr5 33388076 33388160 -169697372 + L2 LINE L2 3228 3313 0 23 0 0 0 chr5 33388258 33388281 -169697251 + AT_rich Low_complexity Low_complexity 1 23 0 184 231 58 115 chr5 33388292 33388396 -169697136 + MER5A DNA MER1_type 92 189 0 232 36 0 0 chr5 33388579 33388607 -169696925 + (TTTTC)n Simple_repeat Simple_repeat 4 140 0 2047 99 0 34 chr5 33388607 33388901 -169696631 - AluSx SINE Alu -1 311 1 365 261 0 11 chr5 33389745 33389833 -169695699 + MER5A DNA MER1_type 9 95 -94 346 315 123 0 chr5 33389949 33390079 -169695453 - MER5A DNA MER1_type -7 182 37 2071 129 0 0 chr5 33391868 33392170 -169693362 + AluSx SINE Alu 1 302 -10 276 30 0 0 chr5 33392557 33392590 -169692942 + (CA)n Simple_repeat Simple_repeat 2 34 0 1477 162 219 70 chr5 33392985 33393035 -169692497 - MLT1C LTR MaLR -6 461 420 3173 95 89 42 chr5 33393035 33393538 -169691994 - MER1A DNA MER1_type 0 527 1 1477 162 219 70 chr5 33393538 33393557 -169691975 - MLT1C LTR MaLR -47 420 405 1572 103 5 5 chr5 33393557 33393781 -169691751 - AluSq SINE Alu -4 309 86 1477 162 219 70 chr5 33393781 33394111 -169691421 - MLT1C LTR MaLR -62 405 1 2077 114 7 0 chr5 33394259 33394557 -169690975 - AluSp SINE Alu -13 300 1 886 122 8 8 chr5 33394653 33394784 -169690748 + FLAM_C SINE Alu 1 131 -2 306 312 100 30 chr5 33394911 33395078 -169690454 + MLT1L LTR MaLR 203 392 -223 1886 83 23 11 chr5 33395078 33395342 -169690190 - AluSx SINE Alu -11 301 35 306 312 100 30 chr5 33395342 33395405 -169690127 + MLT1L LTR MaLR 392 449 -166 1934 177 126 19 chr5 33395428 33395858 -169689674 + MLT1D LTR MaLR 30 505 0 278 271 15 68 chr5 33395872 33396005 -169689527 + MLT1L LTR MaLR 489 614 -1 2098 103 31 0 chr5 33396082 33396372 -169689160 - AluSq SINE Alu -14 299 1 381 259 83 24 chr5 33396524 33396759 -169688773 - MLT1J LTR MaLR -164 347 42 1900 139 13 10 chr5 33396974 33397276 -169688256 + AluJb SINE Alu 1 303 -9 503 304 58 12 chr5 33397901 33398072 -169687460 + MIR3 SINE MIR 22 200 -8 1125 167 142 0 chr5 33398411 33398651 -169686881 + AluJb SINE Alu 35 308 -4 2378 79 0 0 chr5 33398831 33399135 -169686397 + AluSg SINE Alu 2 305 -5 1743 140 0 42 chr5 33399335 33399502 -169686030 - AluJb SINE Alu -18 294 121 183 42 0 0 chr5 33399502 33399526 -169686006 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1595 118 68 54 chr5 33399526 33399806 -169685726 - AluSx SINE Alu -28 284 1 1743 140 0 42 chr5 33399806 33399944 -169685588 - AluJb SINE Alu -189 123 1 1581 180 42 67 chr5 33400215 33400664 -169684868 + LTR37B LTR ERV1 15 452 -16 195 129 0 0 chr5 33400678 33400709 -169684823 + (A)n Simple_repeat Simple_repeat 1 31 0 2280 82 0 20 chr5 33400750 33401055 -169684477 - AluSx SINE Alu -13 299 1 1832 183 49 9 chr5 33401077 33401405 -169684127 - MLT1A1 LTR MaLR -2 363 23 255 149 0 0 chr5 33401404 33401451 -169684081 + AluSp/q SINE Alu 253 299 -4 * 338 200 32 74 chr5 33401452 33401547 -169683985 - L1MC4 LINE L1 -1339 6703 6613 313 189 0 0 chr5 33401569 33401622 -169683910 + AluY SINE Alu 123 175 -126 737 174 49 7 chr5 33401623 33401767 -169683765 + AluJb SINE Alu 145 294 -18 731 305 120 19 chr5 33401788 33402202 -169683330 - L2 LINE L2 -66 3247 2797 25 0 0 0 chr5 33402270 33402295 -169683237 + AT_rich Low_complexity Low_complexity 1 25 0 1814 160 0 3 chr5 33402295 33402588 -169682944 - AluJb SINE Alu -20 292 1 1776 149 57 30 chr5 33402622 33402991 -169682541 - L1MD3 LINE L1 -81 7914 7536 2293 57 10 7 chr5 33403156 33403455 -169682077 - AluY SINE Alu -10 301 2 2054 106 0 10 chr5 33403538 33403831 -169681701 + AluSx SINE Alu 5 294 -18 340 298 100 35 chr5 33404020 33404273 -169681259 - L2 LINE L2 -247 3025 2760 306 271 89 94 chr5 33404599 33404749 -169680783 + L2 LINE L2 2067 2216 -1098 246 62 0 0 chr5 33404749 33404781 -169680751 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2014 116 0 0 chr5 33404783 33405067 -169680465 - AluSx SINE Alu -28 284 1 306 271 89 94 chr5 33405067 33405208 -169680324 + L2 LINE L2 2217 2357 -957 2352 73 0 3 chr5 33405208 33405510 -169680022 + AluY SINE Alu 1 301 -10 306 271 89 94 chr5 33405510 33405650 -169679882 + L2 LINE L2 2357 2500 -814 940 183 0 0 chr5 33405676 33405845 -169679687 - AluJ SINE Alu -15 297 129 683 149 9 0 chr5 33407220 33407327 -169678205 - AluJ SINE Alu -165 147 40 2146 123 0 0 chr5 33407603 33407911 -169677621 + AluSq SINE Alu 1 308 -5 1093 167 6 0 chr5 33408369 33408543 -169676989 - FAM SINE Alu 0 175 1 4846 169 11 25 chr5 33408673 33409530 -169676002 - L1MB7 LINE L1 0 6184 5317 5455 113 34 1 chr5 33409530 33409716 -169675816 - L1PA16 LINE L1 -4 6162 5984 1483 175 13 50 chr5 33409716 33410019 -169675513 + AluJo SINE Alu 11 302 -10 5455 113 34 1 chr5 33410019 33410837 -169674695 - L1PA16 LINE L1 -182 5984 5144 279 0 0 0 chr5 33410837 33410868 -169674664 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5455 113 34 1 chr5 33410868 33411350 -169674182 - L1PA16 LINE L1 -1022 5144 4679 4846 169 11 25 chr5 33411350 33411431 -169674101 - L1MB7 LINE L1 -867 5317 5259 1765 137 27 7 chr5 33411604 33411896 -169673636 - AluJb SINE Alu -4 308 11 294 148 111 0 chr5 33412019 33412073 -169673459 + MER94 DNA DNA 1 60 -74 2113 120 0 3 chr5 33412074 33412382 -169673150 + AluSq SINE Alu 1 307 -6 7971 15 0 0 chr5 33412840 33414159 -169671373 + L1PA3 LINE L1 4854 6172 0 345 293 85 48 chr5 33414714 33414984 -169670548 - ERVL LTR ERVL -477 5287 5008 1507 169 3 77 chr5 33415054 33415419 -169670113 + AluSx SINE Alu 1 312 0 1873 307 148 29 chr5 33415641 33415919 -169669613 - ERVL LTR ERVL -2540 3224 2981 1527 227 0 0 chr5 33415919 33416223 -169669309 - AluJb SINE Alu -8 304 1 1873 307 148 29 chr5 33416223 33417123 -169668409 - ERVL LTR ERVL -2783 2981 1905 375 304 87 7 chr5 33418178 33418316 -169667216 + MIR SINE MIR 2 150 -112 281 232 116 80 chr5 33418584 33418722 -169666810 + LTR33A LTR ERVL 10 152 -371 495 239 102 18 chr5 33418887 33419054 -169666478 + LTR33A LTR ERVL 343 523 0 441 192 88 110 chr5 33419116 33419178 -169666354 - MER5B DNA MER1_type 0 178 116 1481 165 3 58 chr5 33419178 33419470 -169666062 + AluJo SINE Alu 1 275 -37 297 0 0 0 chr5 33419470 33419503 -169666029 + (CA)n Simple_repeat Simple_repeat 1 33 0 1481 165 3 58 chr5 33419503 33419537 -169665995 + AluJo SINE Alu 275 309 -3 441 192 88 110 chr5 33419537 33419656 -169665876 - MER5B DNA MER1_type -62 116 1 1843 129 36 0 chr5 33419671 33419951 -169665581 - AluJb SINE Alu -22 290 1 2149 113 3 0 chr5 33421071 33421371 -169664161 - AluSx SINE Alu -11 301 1 411 285 166 25 chr5 33421727 33421903 -169663629 - MLT1L LTR MaLR -69 546 396 2724 150 12 5 chr5 33421903 33422324 -169663208 + MER61B LTR ERV1 1 424 -1 411 285 166 25 chr5 33422324 33422473 -169663059 - MLT1L LTR MaLR -219 396 175 885 141 21 115 chr5 33422504 33422574 -169662958 + MER5A DNA MER1_type 17 92 -97 1599 131 96 4 chr5 33422574 33422834 -169662698 + AluSx SINE Alu 11 294 -18 885 141 21 115 chr5 33422834 33422954 -169662578 + MER5A DNA MER1_type 92 189 0 332 283 192 17 chr5 33423071 33423248 -169662284 + L2 LINE L2 3106 3313 0 1174 290 84 46 chr5 33423732 33424277 -169661255 - MLT1K LTR MaLR -19 569 4 2964 144 16 48 chr5 33425283 33425718 -169659814 - MER41E LTR ERV1 0 512 64 2183 104 0 0 chr5 33425718 33426016 -169659516 - AluSg SINE Alu -12 298 1 2964 144 16 48 chr5 33426016 33426055 -169659477 - MER41E LTR ERV1 -448 64 54 2329 94 3 0 chr5 33426055 33426364 -169659168 - AluSg SINE Alu 0 310 1 2964 144 16 48 chr5 33426364 33426403 -169659129 - MER41E LTR ERV1 -458 54 15 1843 85 3 120 chr5 33427055 33427397 -169658135 - AluSg1 SINE Alu -7 302 1 277 273 45 45 chr5 33427713 33427801 -169657731 + MER91B DNA MER1_type 100 187 -3 545 248 126 30 chr5 33428689 33428887 -169656645 - LTR40a LTR ERVL -118 401 185 2126 102 7 0 chr5 33428887 33429192 -169656340 - AluSx SINE Alu -3 309 3 3907 126 24 8 chr5 33429213 33429807 -169655725 - LTR9B LTR ERV1 0 644 42 1843 137 23 13 chr5 33430027 33430334 -169655198 + AluSx SINE Alu 1 310 -2 356 268 44 68 chr5 33430898 33431103 -169654429 + HAL1b LINE L1 709 908 -440 481 219 1 32 chr5 33431219 33431343 -169654189 + HAL1b LINE L1 849 2357 -150 1931 133 7 0 chr5 33431477 33431771 -169653761 - AluSx SINE Alu -16 296 1 1342 184 20 47 chr5 33431773 33432072 -169653460 - AluJo SINE Alu -21 291 1 3085 155 41 24 chr5 33432210 33432751 -169652781 - MER21A LTR ERV1 -6 925 376 313 164 49 33 chr5 33432756 33432817 -169652715 - MER21A LTR ERV1 -667 264 203 2018 107 0 7 chr5 33432828 33433117 -169652415 + AluSx SINE Alu 1 287 -25 232 325 123 0 chr5 33433246 33433400 -169652132 + L2 LINE L2 2453 2625 -689 817 250 18 0 chr5 33433846 33434014 -169651518 + MER45A DNA AcHobo 8 178 0 2108 95 3 20 chr5 33434140 33434446 -169651086 - AluSg SINE Alu -9 301 1 1016 254 60 80 chr5 33434562 33434975 -169650557 + LTR16C LTR ERVL 87 491 0 2092 107 7 13 chr5 33435271 33435443 -169650089 - AluSx SINE Alu -5 307 136 2256 92 0 7 chr5 33435443 33435749 -169649783 - AluSg SINE Alu -6 304 1 2092 107 7 13 chr5 33435749 33435885 -169649647 - AluSx SINE Alu -176 136 1 1126 254 95 44 chr5 33435917 33436327 -169649205 - MLT1J LTR MaLR -13 498 59 827 156 0 0 chr5 33436327 33436449 -169649083 + FLAM_A SINE Alu 1 122 -11 1126 254 95 44 chr5 33436449 33436511 -169649021 - MLT1J LTR MaLR -452 59 2 830 219 17 6 chr5 33436837 33437011 -169648521 + MLT1I LTR MaLR 1 176 -233 1614 172 44 51 chr5 33437011 33437476 -169648056 + MLT2D LTR ERVL 1 444 -20 211 176 0 39 chr5 33437476 33437527 -169648005 + (TCTCTG)n Simple_repeat Simple_repeat 3 51 0 234 217 0 0 chr5 33437537 33437583 -169647949 - Alu SINE Alu -8 294 249 564 15 0 0 chr5 33437594 33437659 -169647873 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 200 167 48 0 chr5 33437660 33437702 -169647830 + (CAGAGA)n Simple_repeat Simple_repeat 1 44 0 2596 127 3 8 chr5 33437704 33438090 -169647442 + MER50 LTR ERV1 328 711 -23 498 129 0 0 chr5 33438091 33438161 -169647371 - AluJ/FLAM SINE Alu -241 71 2 2064 133 10 3 chr5 33438976 33439285 -169646247 + AluJb SINE Alu 1 311 -1 296 260 106 19 chr5 33439285 33439389 -169646143 - MER5A DNA MER1_type -32 157 45 946 106 8 0 chr5 33440416 33440548 -169644984 + AluSq/x SINE Alu 1 133 -180 231 61 0 0 chr5 33441105 33441138 -169644394 + (TA)n Simple_repeat Simple_repeat 1 33 0 872 219 0 0 chr5 33441138 33441287 -169644245 - AluJb SINE Alu -25 287 136 2136 133 0 7 chr5 33441368 33441669 -169643863 - AluSx SINE Alu -13 299 1 4855 176 22 106 chr5 33442569 33443061 -169642471 + L1MB3 LINE L1 3984 4516 -1667 274 148 229 0 chr5 33443061 33443122 -169642410 + AluJ/FRAM SINE Alu 223 297 -5 2224 111 3 3 chr5 33443127 33443434 -169642098 + AluSp SINE Alu 7 313 0 4855 176 22 106 chr5 33443434 33443832 -169641700 + L1MB3 LINE L1 4520 4950 -1233 2247 132 3 0 chr5 33443832 33444136 -169641396 + AluSx SINE Alu 1 305 -7 4855 176 22 106 chr5 33444136 33444443 -169641089 + L1MB3 LINE L1 4950 5281 -902 2305 126 0 0 chr5 33444443 33444753 -169640779 + AluSq SINE Alu 1 310 -3 4855 176 22 106 chr5 33444753 33444970 -169640562 + L1MB3 LINE L1 5281 5515 -668 1616 99 9 0 chr5 33444970 33445182 -169640350 + AluY SINE Alu 27 240 -71 4855 176 22 106 chr5 33445182 33445212 -169640320 + L1MB3 LINE L1 5515 5546 -637 2027 144 3 28 chr5 33445212 33445532 -169640000 + AluJb SINE Alu 1 312 0 4855 176 22 106 chr5 33445532 33445569 -169639963 + L1MB3 LINE L1 5546 5585 -598 1799 164 27 0 chr5 33445569 33445861 -169639671 + AluSx SINE Alu 1 300 -12 4855 176 22 106 chr5 33445861 33446130 -169639402 + L1MB3 LINE L1 5585 5875 -308 2025 115 6 48 chr5 33446130 33446443 -169639089 + AluSx SINE Alu 1 300 -12 4855 176 22 106 chr5 33446443 33446518 -169639014 + L1MB3 LINE L1 5875 5955 -228 1628 194 3 7 chr5 33446518 33446812 -169638720 - AluJb SINE Alu -19 293 1 4855 176 22 106 chr5 33446812 33447215 -169638317 + L1MB3 LINE L1 5955 6086 -97 1906 178 99 13 chr5 33447217 33447600 -169637932 + MLT2B2 LTR ERVL 1 416 -99 402 108 0 0 chr5 33447600 33447665 -169637867 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2187 148 166 47 chr5 33447668 33448110 -169637422 - MLT2B3 LTR ERVL 0 554 45 2098 136 3 0 chr5 33448110 33448404 -169637128 - AluSx SINE Alu -15 297 3 2187 148 166 47 chr5 33448404 33448456 -169637076 - MLT2B3 LTR ERVL -509 45 1 314 146 0 0 chr5 33448459 33448507 -169637025 + MLT2B2 LTR ERVL 417 464 0 400 104 104 83 chr5 33448507 33448603 -169636929 + L1MB4 LINE L1 6083 6180 0 2211 89 4 0 chr5 33448951 33449278 -169636254 + AluY SINE Alu 1 328 0 23 0 0 0 chr5 33449278 33449301 -169636231 + AT_rich Low_complexity Low_complexity 1 23 0 2076 148 0 7 chr5 33449710 33450013 -169635519 + AluSx SINE Alu 1 301 -11 2188 120 0 3 chr5 33450065 33450366 -169635166 - AluSx SINE Alu -12 300 1 2134 111 16 97 chr5 33451347 33451450 -169634082 - L1MB3 LINE L1 -1 6182 6072 1700 168 10 7 chr5 33451450 33451742 -169633790 - AluJo SINE Alu -19 293 1 2134 111 16 97 chr5 33451742 33451887 -169633645 - L1MB3 LINE L1 -111 6072 5979 2209 118 3 3 chr5 33451887 33452193 -169633339 - AluSq SINE Alu -7 306 1 2134 111 16 97 chr5 33452193 33452366 -169633166 - L1MB3 LINE L1 -204 5979 5794 2058 123 0 23 chr5 33452377 33452677 -169632855 + AluJo SINE Alu 9 301 -11 2265 101 7 0 chr5 33453075 33453381 -169632151 - AluSx SINE Alu 0 312 5 30 45 0 0 chr5 33453408 33453452 -169632080 + AT_rich Low_complexity Low_complexity 1 44 0 463 133 0 0 chr5 33453555 33453630 -169631902 + AluS SINE Alu 223 297 -15 371 263 122 47 chr5 33454029 33454242 -169631290 + MIR SINE MIR 30 258 -4 2397 127 29 59 chr5 33455396 33456020 -169629512 + Tigger2 DNA MER2_type 3 662 -2056 729 179 0 50 chr5 33456020 33456160 -169629372 + FLAM_A SINE Alu 1 133 0 2397 127 29 59 chr5 33456160 33456251 -169629281 + Tigger2 DNA MER2_type 662 754 -1964 1416 134 40 28 chr5 33456331 33456584 -169628948 + Tigger2 DNA MER2_type 2463 2718 0 2199 144 116 40 chr5 33456630 33457080 -169628452 + L1MB2 LINE L1 5609 6092 -79 1291 234 48 50 chr5 33457414 33457913 -169627619 + L1ME2 LINE L1 4731 5228 -918 2726 205 118 24 chr5 33458203 33459027 -169626505 + L1ME2 LINE L1 5254 6154 -10 22 0 0 0 chr5 33459031 33459053 -169626479 + AT_rich Low_complexity Low_complexity 1 22 0 1697 112 29 54 chr5 33459350 33459627 -169625905 - MER1B DNA MER1_type 0 339 70 24 32 0 0 chr5 33459739 33459770 -169625762 + AT_rich Low_complexity Low_complexity 1 31 0 2387 80 0 3 chr5 33460245 33460544 -169624988 + AluSc SINE Alu 1 298 -11 1750 144 35 11 chr5 33460932 33461217 -169624315 + AluJb SINE Alu 1 292 -20 2233 110 0 0 chr5 33462239 33462538 -169622994 + AluSg1 SINE Alu 1 299 -10 2403 68 10 10 chr5 33463174 33463481 -169622051 + AluSq SINE Alu 1 307 -6 1316 76 6 12 chr5 33463481 33463652 -169621880 + AluSp SINE Alu 134 303 -10 1559 160 35 28 chr5 33464866 33465148 -169620384 + AluJo SINE Alu 11 294 -18 806 166 0 14 chr5 33465408 33465553 -169619979 - FLAM_C SINE Alu 0 143 1 21 57 0 0 chr5 33466228 33466263 -169619269 + AT_rich Low_complexity Low_complexity 1 35 0 1986 136 10 0 chr5 33466334 33466628 -169618904 + AluSx SINE Alu 1 297 -15 949 47 78 8 chr5 33467019 33467147 -169618385 + MER85 DNA T2_type 1 137 -2 21 0 0 0 chr5 33468900 33468921 -169616611 + AT_rich Low_complexity Low_complexity 1 21 0 310 331 75 0 chr5 33469316 33469449 -169616083 - MIR SINE MIR -2 260 118 623 86 0 0 chr5 33469459 33469540 -169615992 - MER51B LTR ERV1 -296 81 1 2119 117 28 0 chr5 33469977 33470268 -169615264 + AluSx SINE Alu 4 302 -10 2216 79 3 60 chr5 33470724 33471042 -169614490 + AluSq SINE Alu 1 300 -13 1837 122 0 85 chr5 33471706 33471843 -169613689 + AluJb SINE Alu 1 148 -164 2477 91 0 0 chr5 33471843 33472152 -169613380 + AluSc SINE Alu 1 309 0 1837 122 0 85 chr5 33472152 33472343 -169613189 + AluJb SINE Alu 148 301 -11 2224 118 113 40 chr5 33472923 33473099 -169612433 + MSTA LTR MaLR 1 163 -265 2341 105 0 0 chr5 33473099 33473405 -169612127 + AluSc SINE Alu 1 306 -3 2224 118 113 40 chr5 33473405 33473626 -169611906 + MSTA LTR MaLR 163 427 -1 1417 196 71 37 chr5 33474296 33474648 -169610884 + MLT1A1 LTR MaLR 1 364 -1 1962 113 0 85 chr5 33474771 33475089 -169610443 + AluSx SINE Alu 5 295 -17 637 306 57 21 chr5 33475844 33476298 -169609234 - MARNA DNA Mariner -17 569 58 2170 93 3 46 chr5 33477534 33477915 -169607617 - AluSx SINE Alu 0 367 1 205 288 151 0 chr5 33478483 33478622 -169606910 - MIR SINE MIR -9 253 94 778 216 43 75 chr5 33478625 33478989 -169606543 + MLT1C LTR MaLR 2 417 -50 1958 127 7 14 chr5 33478997 33479273 -169606259 - AluSq SINE Alu -24 289 16 369 269 0 0 chr5 33479273 33479351 -169606181 + Tigger1 DNA MER2_type 2338 2415 -3 1639 173 23 16 chr5 33479356 33479663 -169605869 - L1MB7 LINE L1 -64 6120 5812 3626 126 66 28 chr5 33479670 33480147 -169605385 - L1MB2 LINE L1 -3 6168 5657 1936 133 23 13 chr5 33480147 33480448 -169605084 - AluSx SINE Alu -8 304 1 3626 126 66 28 chr5 33480448 33480638 -169604894 - L1MB2 LINE L1 -514 5657 5476 243 88 0 0 chr5 33480638 33480672 -169604860 + (TTCCC)n Simple_repeat Simple_repeat 3 36 0 226 135 39 19 chr5 33480674 33480726 -169604806 - L1MB2 LINE L1 -692 5488 5436 2052 143 0 0 chr5 33480728 33481022 -169604510 - AluJb SINE Alu -18 294 1 455 294 92 14 chr5 33481167 33481385 -169604147 - MIR SINE MIR -9 253 19 315 264 106 44 chr5 33481785 33482058 -169603474 + MER95 LTR ERV 10 299 -132 362 205 43 0 chr5 33482133 33482216 -169603316 + AluJ/FLAM SINE Alu 2 66 -236 3632 92 317 0 chr5 33482216 33482843 -169602689 - LTR12 LTR ERV1 0 826 1 6794 113 5 8 chr5 33482922 33484109 -169601423 - Harlequin LTR ERV1 -1 8398 504 756 141 138 15 chr5 33484107 33484376 -169601156 - Harlequin LTR ERV1 -5755 1141 840 * 33766 85 4 6 chr5 33484343 33488778 -169596754 - Harlequin LTR ERV1 -3425 4974 548 1934 137 4 0 chr5 33488778 33489056 -169596476 + AluSx SINE Alu 31 309 -3 209 127 16 48 chr5 33489064 33489127 -169596405 + A-rich Low_complexity Low_complexity 6 66 0 1309 243 146 47 chr5 33489147 33489654 -169595878 + MER34B LTR ERV1 6 562 -3 222 37 0 0 chr5 33489719 33489746 -169595786 + (CA)n Simple_repeat Simple_repeat 2 28 0 180 111 0 0 chr5 33489806 33489833 -169595699 + (TA)n Simple_repeat Simple_repeat 2 28 0 327 49 0 0 chr5 33489868 33489909 -169595623 + (TG)n Simple_repeat Simple_repeat 2 42 0 512 278 134 57 chr5 33489990 33490343 -169595189 + MLT1L LTR MaLR 157 437 -74 583 141 0 0 chr5 33490350 33490435 -169595097 - L1MC1 LINE L1 -14 6319 6235 507 293 47 7 chr5 33490480 33490630 -169594902 - MER34 LTR ERV1 -35 507 352 2949 141 29 41 chr5 33490632 33491105 -169594427 - LTR62 LTR ERVK -2 717 240 2264 98 3 0 chr5 33491105 33491410 -169594122 - AluSp SINE Alu -7 306 1 2183 102 6 29 chr5 33491417 33491731 -169593801 - AluSx SINE Alu -5 307 1 2949 141 29 41 chr5 33491731 33491759 -169593773 - LTR62 LTR ERVK -485 234 214 1288 45 0 0 chr5 33491761 33491918 -169593614 + AluY SINE Alu 148 304 -7 1512 127 14 0 chr5 33491918 33492139 -169593393 - LTR62 LTR ERVK -495 224 1 204 40 0 0 chr5 33492295 33492320 -169593212 + (CA)n Simple_repeat Simple_repeat 2 26 0 664 194 16 0 chr5 33492323 33492452 -169593080 - FRAM SINE Alu -35 141 11 381 301 36 31 chr5 33492514 33492710 -169592822 - MER34 LTR ERV1 -345 197 1 1650 128 91 4 chr5 33492719 33492993 -169592539 - L1MC1 LINE L1 -107 6226 5929 390 202 20 20 chr5 33492993 33493092 -169592440 + MLT1L LTR MaLR 513 611 -4 839 194 7 19 chr5 33493245 33493400 -169592132 + FRAM SINE Alu 2 154 -12 268 281 0 62 chr5 33493495 33493591 -169591941 - MIR3 SINE MIR -5 203 114 2014 127 144 8 chr5 33494059 33494373 -169591159 + MLT2D LTR ERVL 3 374 -40 774 32 0 0 chr5 33494373 33494466 -169591066 + (CA)n Simple_repeat Simple_repeat 1 93 0 2014 127 144 8 chr5 33494466 33494512 -169591020 + MLT2D LTR ERVL 374 412 -2 209 186 0 23 chr5 33495059 33495102 -169590430 + G-rich Low_complexity Low_complexity 4 45 0 439 128 2 4 chr5 33495420 33495496 -169590036 + MSTB2 LTR MaLR 351 454 -3 283 203 49 16 chr5 33495690 33495813 -169589719 + (TA)n Simple_repeat Simple_repeat 2 128 0 852 264 14 9 chr5 33496265 33496481 -169589051 + MER20 DNA MER1_type 3 219 0 2192 150 30 57 chr5 33496696 33496914 -169588618 - MSTB1 LTR MaLR -4 428 227 2794 104 67 2 chr5 33496914 33497316 -169588216 + MSTA LTR MaLR 1 428 0 2192 150 30 57 chr5 33497316 33497537 -169587995 - MSTB1 LTR MaLR -205 227 1 1865 138 0 3 chr5 33497792 33498172 -169587360 + AluSx SINE Alu 1 379 0 2062 89 45 0 chr5 33498172 33498464 -169587068 + AluSc SINE Alu 2 306 -3 303 194 21 54 chr5 33498701 33498794 -169586738 + MER96 DNA MER1_type? 1 90 -85 2083 92 0 49 chr5 33499594 33499977 -169585555 - AluSx SINE Alu 0 367 1 270 296 148 0 chr5 33500545 33500687 -169584845 - MIR SINE MIR -9 253 91 1200 194 136 74 chr5 33500687 33501059 -169584473 + MLT1C LTR MaLR 2 441 -64 1932 131 7 14 chr5 33501059 33501350 -169584182 - AluSq SINE Alu -24 289 1 1200 194 136 74 chr5 33501350 33501397 -169584135 + MLT1C LTR MaLR 441 484 -21 230 234 0 0 chr5 33501415 33501462 -169584070 - MIR SINE MIR -168 94 48 266 108 0 0 chr5 33501734 33501771 -169583761 + MIR SINE MIR 94 130 -78 2162 105 0 7 chr5 33501867 33502163 -169583369 + AluSg SINE Alu 1 294 -16 743 133 9 0 chr5 33502163 33502276 -169583256 - L1PB3 LINE L1 -9 6145 6032 23 0 0 0 chr5 33502322 33502345 -169583187 + AT_rich Low_complexity Low_complexity 1 23 0 1974 125 10 6 chr5 33502437 33502748 -169582784 + AluJb SINE Alu 1 312 0 188 111 28 0 chr5 33503473 33503509 -169582023 + (TTA)n Simple_repeat Simple_repeat 2 38 0 245 62 0 0 chr5 33503754 33503786 -169581746 + L1MB7 LINE L1 6008 6039 -145 1912 93 47 47 chr5 33503844 33504144 -169581388 - AluSx SINE Alu -12 300 1 712 118 33 92 chr5 33504145 33504272 -169581260 + L1MB7 LINE L1 6022 6140 -44 1900 113 39 0 chr5 33504272 33504554 -169580978 - AluSc SINE Alu -16 293 1 712 118 33 92 chr5 33504554 33504579 -169580953 + L1MB7 LINE L1 6140 6165 -19 198 261 0 43 chr5 33504585 33504654 -169580878 - L2 LINE L2 0 3313 3248 394 325 65 6 chr5 33504656 33504825 -169580707 - MIR SINE MIR 0 262 84 2823 13 0 0 chr5 33504893 33505210 -169580322 - AluYb8 SINE Alu -1 317 1 402 196 10 49 chr5 33505363 33505465 -169580067 + MLT1J1 LTR MaLR 349 446 0 413 309 18 12 chr5 33505630 33505795 -169579737 - MLT1J LTR MaLR -31 480 315 734 96 0 80 chr5 33505957 33506082 -169579450 - FLAM_C SINE Alu -2 141 27 212 234 62 47 chr5 33506292 33506356 -169579176 - MIR SINE MIR -196 66 2 2200 187 51 26 chr5 33506419 33506912 -169578620 - MLT1D LTR MaLR 0 505 1 1781 116 3 88 chr5 33507238 33507557 -169577975 + AluSx SINE Alu 1 292 -20 293 231 19 48 chr5 33507710 33507814 -169577718 - MER96 DNA MER1_type? -74 101 1 889 158 6 12 chr5 33508049 33508213 -169577319 - AluJo SINE Alu -149 163 1 486 117 48 78 chr5 33508248 33508351 -169577181 + Tigger1 DNA MER2_type 30 129 -2289 1625 194 0 22 chr5 33508352 33508671 -169576861 - AluJb SINE Alu 0 312 1 757 181 0 28 chr5 33508671 33508815 -169576717 - AluJo SINE Alu -171 141 2 7466 107 56 99 chr5 33508815 33509450 -169576082 + Tigger1 DNA MER2_type 965 1626 -792 1552 178 51 4 chr5 33509450 33509726 -169575806 + AluJb SINE Alu 1 289 -23 7466 107 56 99 chr5 33509726 33510400 -169575132 + Tigger1 DNA MER2_type 1626 2328 -90 1859 147 0 0 chr5 33510400 33510686 -169574846 - AluSx SINE Alu -26 286 1 7466 107 56 99 chr5 33510686 33510804 -169574728 + Tigger1 DNA MER2_type 2328 2333 -85 2058 125 0 0 chr5 33510804 33511101 -169574431 - AluSx SINE Alu -15 297 1 2238 113 17 59 chr5 33512081 33512167 -169573365 - L1MB3 LINE L1 -1 6182 6094 1587 178 10 7 chr5 33512167 33512476 -169573056 - AluJo SINE Alu -2 310 1 2238 113 17 59 chr5 33512476 33512621 -169572911 - L1MB3 LINE L1 -89 6094 5944 2027 120 3 3 chr5 33512621 33512920 -169572612 - AluSq SINE Alu -14 299 1 2238 113 17 59 chr5 33512920 33513093 -169572439 - L1MB3 LINE L1 -239 5944 5794 1943 124 0 20 chr5 33513104 33513403 -169572129 + AluJo SINE Alu 9 301 -11 2107 105 7 0 chr5 33513790 33514094 -169571438 - AluSx SINE Alu -2 310 5 2092 102 7 0 chr5 33514152 33514447 -169571085 - AluSq SINE Alu -16 297 1 820 113 14 50 chr5 33514649 33514790 -169570742 - AluJb SINE Alu -175 137 2 2006 118 7 3 chr5 33515346 33515643 -169569889 - AluSx SINE Alu -8 304 7 247 129 188 82 chr5 33515803 33515888 -169569644 + MLT1F1 LTR MaLR 435 528 -39 289 302 245 0 chr5 33516646 33516752 -169568780 - L2 LINE L2 0 3272 3141 1808 119 31 3 chr5 33516833 33517127 -169568405 + AluSq SINE Alu 1 302 -11 200 326 149 0 chr5 33517275 33517450 -169568082 - L2 LINE L2 -337 2977 2777 1956 159 0 0 chr5 33517452 33517761 -169567771 - AluSx SINE Alu -3 309 1 957 204 35 10 chr5 33517786 33517987 -169567545 - AluJo SINE Alu -6 306 101 1717 151 3 57 chr5 33517988 33518305 -169567227 - AluJb SINE Alu -11 301 2 1253 291 132 14 chr5 33518377 33518869 -169566663 - L2 LINE L2 -654 2660 2111 578 264 8 78 chr5 33519317 33519575 -169565957 - L1MC5 LINE L1 -26 7935 7696 706 206 15 0 chr5 33519579 33519710 -169565822 - FLAM_A SINE Alu 0 133 1 1878 121 11 0 chr5 33519806 33520118 -169565414 + AluSx SINE Alu 1 315 0 2073 127 29 19 chr5 33520118 33520486 -169565046 + L1MB1 LINE L1 5792 6167 -1 2338 94 0 0 chr5 33520513 33520822 -169564710 + AluSq SINE Alu 1 309 -4 931 215 51 14 chr5 33521141 33521355 -169564177 + MIR SINE MIR 41 262 0 257 303 41 25 chr5 33522116 33522238 -169563294 + LTR67 LTR ERVL 428 551 -6 556 178 10 0 chr5 33522892 33522993 -169562539 + MLT1A2 LTR MaLR 1 102 -272 692 193 37 15 chr5 33522999 33523134 -169562398 + MLT1A2 LTR MaLR 236 373 -1 544 259 222 32 chr5 33523135 33523482 -169562050 + MLT1L LTR MaLR 30 442 -173 238 262 47 28 chr5 33523510 33523617 -169561915 + MLT1L LTR MaLR 507 615 0 589 259 8 2 chr5 33523727 33523860 -169561672 + MIR SINE MIR 3 133 -75 2154 95 0 3 chr5 33523884 33524169 -169561363 - AluSq SINE Alu -29 284 1 269 216 14 14 chr5 33524193 33524267 -169561265 + MER20B DNA MER1_type 232 305 -478 445 210 25 50 chr5 33524267 33524386 -169561146 + MIR SINE MIR 143 258 -4 1287 71 6 0 chr5 33524509 33524678 -169560854 - AluSp SINE Alu -7 306 137 1962 120 43 0 chr5 33524680 33524979 -169560553 - AluSx SINE Alu 0 312 1 1472 266 34 15 chr5 33525347 33525757 -169559775 + MER20B DNA MER1_type 4 421 -362 820 80 9 0 chr5 33525780 33525892 -169559640 + AluSp SINE Alu 1 113 -200 1997 121 0 24 chr5 33525895 33526193 -169559339 - AluSq SINE Alu -22 291 1 1675 260 57 43 chr5 33526204 33526617 -169558915 - L1ME3A LINE L1 0 6170 5743 1749 154 47 70 chr5 33526617 33526659 -169558873 - THE1C LTR MaLR 0 375 334 2038 113 40 0 chr5 33526659 33526959 -169558573 + AluSx SINE Alu 1 312 0 1749 154 47 70 chr5 33526959 33527300 -169558232 - THE1C LTR MaLR -41 334 1 1675 260 57 43 chr5 33527300 33527539 -169557993 - L1ME3A LINE L1 -427 5743 5509 1160 149 67 37 chr5 33528271 33528597 -169556935 - MSTD LTR MaLR 0 396 16 183 365 0 0 chr5 33528597 33528660 -169556872 + MIR3 SINE MIR 115 177 -31 * 269 282 115 63 chr5 33528645 33528819 -169556713 - MER5A DNA MER1_type -6 183 1 2388 158 58 27 chr5 33529511 33529852 -169555680 - MSTB LTR MaLR -1 425 96 1820 140 70 20 chr5 33529852 33530209 -169555323 + THE1C LTR MaLR 1 375 0 9724 120 18 65 chr5 33530211 33530535 -169554997 + THE1C-int LTR MaLR 3 341 -1239 1604 152 48 4 chr5 33530535 33530827 -169554705 - AluSx SINE Alu 0 304 1 9724 120 18 65 chr5 33530827 33530883 -169554649 + THE1C-int LTR MaLR 341 398 -1182 2020 138 0 3 chr5 33530883 33531188 -169554344 - AluSq SINE Alu -5 308 5 9724 120 18 65 chr5 33531188 33532462 -169553070 + THE1C-int LTR MaLR 398 1580 0 1914 130 82 25 chr5 33532462 33532817 -169552715 + THE1C LTR MaLR 1 375 0 2388 158 58 27 chr5 33532817 33532883 -169552649 - MSTB LTR MaLR -329 97 1 444 277 77 0 chr5 33533116 33533246 -169552286 + MIR3 SINE MIR 30 169 -39 477 194 153 14 chr5 33533254 33533398 -169552134 + MER104 DNA Tc2 14 177 -3 405 312 102 76 chr5 33533536 33534104 -169551428 - L2 LINE L2 -227 3045 2452 1649 152 7 39 chr5 33534104 33534413 -169551119 + AluJb SINE Alu 14 312 0 405 312 102 76 chr5 33534413 33534604 -169550928 - L2 LINE L2 -820 2452 2267 680 209 264 29 chr5 33534649 33534922 -169550610 + LTR33 LTR ERVL 15 351 -170 227 283 0 0 chr5 33534923 33534976 -169550556 + LTR33 LTR ERVL 468 520 -1 1869 124 3 39 chr5 33535641 33535947 -169549585 + AluSp SINE Alu 1 295 -18 1860 310 64 43 chr5 33535972 33536945 -169548587 + HERVL LTR ERVL 2979 3971 -1683 1633 197 124 50 chr5 33536947 33537089 -169548443 + MLT1D LTR MaLR 31 161 -344 1936 152 3 3 chr5 33537089 33537399 -169548133 - AluJo SINE Alu -2 310 1 1633 197 124 50 chr5 33537399 33537488 -169548044 + MLT1D LTR MaLR 161 242 -263 1928 82 56 4 chr5 33537488 33537796 -169547736 + AluSq SINE Alu 1 322 0 1633 197 124 50 chr5 33537796 33537877 -169547655 + MLT1D LTR MaLR 242 316 -189 1913 117 13 23 chr5 33537877 33538186 -169547346 - AluSx SINE Alu -6 306 1 1633 197 124 50 chr5 33538186 33538312 -169547220 + MLT1D LTR MaLR 316 505 0 369 281 10 10 chr5 33538312 33538408 -169547124 + HERVL LTR ERVL 4023 4118 -1646 427 191 0 0 chr5 33538415 33538483 -169547049 - U4 snRNA snRNA -77 68 1 2113 119 0 3 chr5 33538487 33538797 -169546735 - AluSx SINE Alu -3 309 1 744 118 27 0 chr5 33538817 33538927 -169546605 - AluJo SINE Alu -177 135 23 311 179 0 18 chr5 33538943 33538999 -169546533 + HERVL LTR ERVL 4107 4161 -1603 658 267 20 59 chr5 33538999 33539171 -169546361 - MIR SINE MIR -59 203 39 1027 173 34 29 chr5 33539171 33539379 -169546153 - MER3 DNA MER1_type 0 209 1 658 267 20 59 chr5 33539379 33539408 -169546124 - MIR SINE MIR -223 39 10 311 256 0 181 chr5 33539770 33539837 -169545695 - L2 LINE L2 -1 3312 3289 1944 134 7 0 chr5 33539837 33540128 -169545404 - AluJb SINE Alu -19 293 1 311 256 0 181 chr5 33540128 33540220 -169545312 - L2 LINE L2 -24 3289 3182 322 248 20 30 chr5 33540547 33540648 -169544884 + MIR SINE MIR 102 201 -61 2115 111 0 0 chr5 33540675 33540973 -169544559 - AluSx SINE Alu -14 298 1 306 118 15 29 chr5 33540921 33540989 -169544543 - AluSp SINE Alu -116 187 121 227 313 100 40 chr5 33540979 33541129 -169544403 - L2 LINE L2 -602 2712 2554 * 1125 148 0 0 chr5 33541167 33541343 -169544189 + L1MB7 LINE L1 5623 5798 -386 1249 132 29 5 chr5 33541344 33541548 -169543984 + L1MB7 LINE L1 5850 6058 -126 866 223 48 31 chr5 33541548 33541777 -169543755 - MIR SINE MIR -27 235 3 430 288 198 37 chr5 33542087 33542562 -169542970 - L2 LINE L2 -1 3271 2729 2116 132 7 0 chr5 33542802 33543106 -169542426 + AluSx SINE Alu 1 306 -6 302 280 133 35 chr5 33543143 33543154 -169542378 - MIR SINE MIR -35 227 218 1943 151 3 13 chr5 33543154 33543452 -169542080 + AluJb SINE Alu 1 295 -17 302 280 133 35 chr5 33543452 33543583 -169541949 - MIR SINE MIR -44 218 71 2028 90 36 7 chr5 33544339 33544640 -169540892 - AluSg SINE Alu 0 310 1 687 245 217 31 chr5 33544950 33545305 -169540227 + L2 LINE L2 2854 3274 -39 22 35 0 0 chr5 33545711 33545740 -169539792 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 33545787 33545829 -169539703 + GC_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 33546181 33546210 -169539322 + GC_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr5 33546388 33546412 -169539120 + (CGG)n Simple_repeat Simple_repeat 2 25 0 247 151 41 0 chr5 33546536 33546609 -169538923 + (CCCGG)n Simple_repeat Simple_repeat 2 77 0 702 120 77 8 chr5 33547609 33547726 -169537806 - FLAM_C SINE Alu -8 125 1 427 153 194 14 chr5 33547861 33548005 -169537527 - MER104 DNA Tc2 -5 175 6 406 95 40 14 chr5 33548217 33548291 -169537241 - L1PB3 LINE L1 -9 6145 6070 25 51 0 0 chr5 33548593 33548632 -169536900 + AT_rich Low_complexity Low_complexity 1 39 0 785 170 157 0 chr5 33549126 33549285 -169536247 - MER8 DNA MER2_type -55 184 1 2059 116 3 10 chr5 33549374 33549677 -169535855 + AluSx SINE Alu 1 301 -11 2340 95 3 0 chr5 33549980 33550285 -169535247 - AluSx SINE Alu -6 306 1 1040 160 12 0 chr5 33550823 33550992 -169534540 - FRAM SINE Alu -5 171 1 278 298 107 25 chr5 33551637 33551758 -169533774 + MIR SINE MIR 5 135 -127 2314 70 13 3 chr5 33552089 33552391 -169533141 + AluSp SINE Alu 1 305 -8 237 295 129 21 chr5 33552553 33552878 -169532654 + L1M4 LINE L1 4485 4844 -1302 219 284 0 108 chr5 33553332 33553406 -169532126 - L2 LINE L2 -89 3183 3118 265 235 29 15 chr5 33553588 33553656 -169531876 + MIR SINE MIR 29 97 -165 275 262 12 60 chr5 33553765 33553849 -169531683 - L1ME3A LINE L1 -66 6104 6025 545 221 15 23 chr5 33553908 33554039 -169531493 + FLAM_C SINE Alu 9 138 -5 256 262 16 0 chr5 33554046 33554107 -169531425 + MIR SINE MIR 201 262 0 225 245 0 20 chr5 33554144 33554193 -169531339 + L2 LINE L2 3217 3264 -8 2546 51 0 10 chr5 33554225 33554537 -169530995 + AluY SINE Alu 1 309 -2 197 361 39 31 chr5 33555078 33555208 -169530324 + L2 LINE L2 2607 2737 -577 273 283 101 0 chr5 33555323 33555422 -169530110 + MER46C DNA MER2_type 87 195 -143 1427 186 47 24 chr5 33555467 33555763 -169529769 + AluJb SINE Alu 1 303 -9 4505 170 82 44 chr5 33555794 33556594 -169528938 + Looper DNA T2_type 6 775 -783 1488 168 45 11 chr5 33556594 33556880 -169528652 - AluJb SINE Alu -14 298 3 4505 170 82 44 chr5 33556880 33557509 -169528023 + Looper DNA T2_type 775 1548 -10 1569 184 44 17 chr5 33557649 33557942 -169527590 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr5 33557978 33558001 -169527531 + AT_rich Low_complexity Low_complexity 1 23 0 620 135 0 0 chr5 33558051 33558140 -169527392 + AluJo SINE Alu 1 89 -223 866 178 45 5 chr5 33558141 33558343 -169527189 + L1M3 LINE L1 5266 5475 -693 322 216 196 0 chr5 33558349 33558446 -169527086 - Looper DNA T2_type -164 1394 1279 229 217 0 0 chr5 33558444 33558490 -169527042 - Alu SINE Alu -54 248 203 * 1094 174 38 24 chr5 33558490 33558689 -169526843 + AluJo SINE Alu 95 299 -13 586 208 97 39 chr5 33558689 33558843 -169526689 + AluJo/FRAM SINE Alu 137 299 -3 1094 174 38 24 chr5 33558843 33558856 -169526676 + AluJo SINE Alu 299 310 -2 1881 168 7 3 chr5 33559583 33559887 -169525645 - AluJb SINE Alu -7 305 1 519 270 93 28 chr5 33559962 33560501 -169525031 - L1MEd LINE L1 -4865 1254 788 1249 181 63 98 chr5 33560580 33560895 -169524637 - AluJo SINE Alu -8 304 1 502 130 190 0 chr5 33561016 33561116 -169524416 + MER46A DNA MER2_type 118 236 0 358 77 0 19 chr5 33561237 33561289 -169524243 - AluSc SINE Alu -154 145 95 2580 48 0 3 chr5 33561396 33561706 -169523826 + AluY SINE Alu 1 309 -2 220 310 14 14 chr5 33561980 33562051 -169523481 + MER5C DNA MER1_type 4 74 -250 800 205 6 31 chr5 33562098 33562259 -169523273 - AluJo/FRAM SINE Alu -22 290 134 2068 84 8 0 chr5 33562259 33562520 -169523012 - AluSx SINE Alu -16 296 34 4259 198 76 42 chr5 33562547 33563290 -169522242 - L1 LINE L1 -978 5168 4452 1121 163 202 31 chr5 33563290 33563548 -169521984 - AluJb SINE Alu 0 302 1 4259 198 76 42 chr5 33563548 33563766 -169521766 - L1 LINE L1 -1694 4452 4243 1879 152 0 13 chr5 33563766 33564068 -169521464 - AluSx SINE Alu -14 298 1 4259 198 76 42 chr5 33564068 33564402 -169521130 - L1 LINE L1 -1903 4243 3828 304 259 0 47 chr5 33564460 33564545 -169520987 + MIR SINE MIR 15 95 -167 825 193 293 7 chr5 33564754 33564861 -169520671 - Charlie1 DNA MER1_type -4 2757 2682 2170 101 10 3 chr5 33564861 33565158 -169520374 + AluSx SINE Alu 1 299 -13 825 193 293 7 chr5 33565158 33565442 -169520090 - Charlie1 DNA MER1_type -79 2682 1 226 279 34 62 chr5 33565460 33565639 -169519893 - HAL1 LINE L1 -109 2398 2225 2168 90 40 7 chr5 33566121 33566421 -169519111 - AluY SINE Alu -1 310 1 929 236 214 29 chr5 33566502 33567049 -169518483 - HAL1 LINE L1 -590 1917 1270 33 0 0 0 chr5 33567312 33567345 -169518187 + AT_rich Low_complexity Low_complexity 1 33 0 1511 162 70 4 chr5 33567345 33567617 -169517915 - AluJo SINE Alu -22 290 1 1940 159 3 10 chr5 33567860 33568168 -169517364 - AluJo SINE Alu -6 306 1 337 263 21 0 chr5 33568321 33568416 -169517116 + MER94 DNA DNA 4 100 -34 550 275 99 77 chr5 33568970 33569425 -169516107 - L3 LINE CR1 -199 1378 914 1005 147 36 62 chr5 33569846 33570071 -169515461 - MER20 DNA MER1_type 0 219 1 2221 122 0 0 chr5 33571045 33571341 -169514191 + AluSx SINE Alu 1 296 -16 24 53 0 0 chr5 33572299 33572337 -169513195 + AT_rich Low_complexity Low_complexity 1 38 0 2478 72 0 0 chr5 33572398 33572704 -169512828 - AluY SINE Alu -5 306 1 1200 59 0 0 chr5 33573615 33573768 -169511764 + L1PA5 LINE L1 6000 6152 -2 403 297 97 18 chr5 33573822 33573987 -169511545 + MIR3 SINE MIR 23 200 -8 2385 96 3 0 chr5 33574049 33574350 -169511182 - AluSp SINE Alu -11 302 1 196 261 148 0 chr5 33574451 33574539 -169510993 + MIR SINE MIR 42 142 -66 896 167 0 0 chr5 33574586 33574718 -169510814 + FRAM SINE Alu 34 165 -11 279 0 0 0 chr5 33575166 33575197 -169510335 + (CA)n Simple_repeat Simple_repeat 1 31 0 222 319 83 12 chr5 33576463 33576683 -169508849 - L2 LINE L2 -357 2915 2695 25 51 0 0 chr5 33577149 33577188 -169508344 + AT_rich Low_complexity Low_complexity 1 39 0 354 0 89 0 chr5 33577434 33577490 -169508042 + T-rich Low_complexity Low_complexity 1 61 0 2019 100 4 18 chr5 33577499 33577779 -169507753 - AluSx SINE Alu -36 276 1 1795 243 112 70 chr5 33577784 33578730 -169506802 - L1MC4 LINE L1 -15 8027 7019 1140 205 107 25 chr5 33578730 33578976 -169506556 + MER2 DNA MER2_type 1 280 -64 2132 135 0 0 chr5 33578976 33579272 -169506260 - AluSx SINE Alu -13 299 4 1140 205 107 25 chr5 33579272 33579342 -169506190 + MER2 DNA MER2_type 280 343 -1 1795 243 112 70 chr5 33579342 33579592 -169505940 - L1MC4 LINE L1 -1023 7019 6781 268 281 94 35 chr5 33579592 33579763 -169505769 - L1ME LINE L1 -303 5818 5638 1831 141 28 24 chr5 33580064 33580355 -169505177 - AluJb SINE Alu -20 292 1 1251 143 109 13 chr5 33580372 33580602 -169504930 - AluJb SINE Alu -3 309 58 718 129 245 22 chr5 33580688 33580827 -169504705 - AluJb SINE Alu -9 303 134 289 221 15 15 chr5 33580909 33580977 -169504555 - MER2 DNA MER2_type -1 344 277 367 134 15 15 chr5 33580980 33581047 -169504485 + AluS SINE Alu 4 70 -233 216 0 0 0 chr5 33582021 33582045 -169503487 + (T)n Simple_repeat Simple_repeat 1 24 0 188 324 196 0 chr5 33583062 33583164 -169502368 + L2 LINE L2 3141 3262 -10 23 33 0 0 chr5 33583255 33583285 -169502247 + AT_rich Low_complexity Low_complexity 1 30 0 248 145 0 16 chr5 33583394 33583456 -169502076 + (CAG)n Simple_repeat Simple_repeat 1 61 0 385 238 66 74 chr5 33585411 33585533 -169499999 + MIR3 SINE MIR 43 163 -45 181 100 33 0 chr5 33585587 33585617 -169499915 + MIR3 SINE MIR 168 198 -10 1192 191 5 5 chr5 33585686 33585901 -169499631 + AluJb SINE Alu 75 289 -23 220 257 57 76 chr5 33587079 33587184 -169498348 + MIR SINE MIR 92 194 -68 403 341 130 18 chr5 33587628 33587923 -169497609 + L2 LINE L2 1476 1737 -1577 1661 186 3 40 chr5 33587923 33588246 -169497286 - AluJb SINE Alu -1 311 1 403 341 130 18 chr5 33588246 33588604 -169496928 + L2 LINE L2 1737 2202 -1112 404 347 88 60 chr5 33588961 33589540 -169495992 + L2 LINE L2 2672 3267 -5 1377 163 62 56 chr5 33589876 33590164 -169495368 - AluJb SINE Alu -22 290 1 28 29 0 0 chr5 33590472 33590507 -169495025 + AT_rich Low_complexity Low_complexity 1 35 0 243 296 244 7 chr5 33591276 33591411 -169494121 + MIR SINE MIR 67 233 -29 2175 130 0 3 chr5 33591428 33591736 -169493796 - AluSg SINE Alu -3 307 1 1086 146 12 2 chr5 33591802 33592055 -169493477 + AluSx SINE Alu 1 310 0 2582 56 7 3 chr5 33592574 33592880 -169492652 + AluY SINE Alu 1 307 -4 2016 114 17 27 chr5 33592975 33593272 -169492260 + AluSg SINE Alu 1 294 -16 1305 99 0 68 chr5 33593972 33594193 -169491339 - AluSg/x SINE Alu -18 292 87 968 72 7 29 chr5 33594308 33594446 -169491086 - AluSg SINE Alu -175 135 1 2291 127 36 69 chr5 33594616 33594678 -169490854 - Tigger2a DNA MER2_type -2274 434 371 1633 157 34 0 chr5 33594678 33594945 -169490587 - AluJb SINE Alu -16 296 21 2291 127 36 69 chr5 33594945 33595331 -169490201 - Tigger2a DNA MER2_type -2337 371 1 2019 153 16 62 chr5 33596236 33596433 -169489099 - L1MB8 LINE L1 -87 6091 5886 345 124 0 186 chr5 33596433 33596530 -169489002 - MADE1 DNA Mariner 0 80 2 2019 153 16 62 chr5 33596530 33596764 -169488768 - L1MB8 LINE L1 -292 5886 5680 1644 171 60 106 chr5 33597148 33597263 -169488269 - Charlie1b DNA MER1_type -2238 523 404 2306 84 10 3 chr5 33597263 33597559 -169487973 + AluSp SINE Alu 1 298 -15 1644 171 60 106 chr5 33597559 33597900 -169487632 - Charlie1b DNA MER1_type -2357 404 94 2053 147 0 0 chr5 33597900 33598192 -169487340 - AluSx SINE Alu -20 292 1 1644 171 60 106 chr5 33598192 33598282 -169487250 - Charlie1b DNA MER1_type -2667 94 1 295 350 17 8 chr5 33598617 33598734 -169486798 - L2 LINE L2 -22 3291 3174 1429 159 107 15 chr5 33598871 33599141 -169486391 + AluJb SINE Alu 1 295 -17 617 180 0 0 chr5 33599548 33599648 -169485884 - Tigger7 DNA MER2_type 0 2487 2388 * 1172 227 51 8 chr5 33599645 33599901 -169485631 - Tigger7 DNA MER2_type -2220 267 1 359 238 56 88 chr5 33599901 33600121 -169485411 + Charlie8 DNA MER1_type 175 477 -1940 2068 122 0 17 chr5 33600743 33601037 -169484495 - AluSx SINE Alu -23 289 1 302 204 10 3 chr5 33601285 33601367 -169484165 - AluJb SINE Alu -49 253 139 694 203 0 8 chr5 33601424 33601547 -169483985 + FLAM_C SINE Alu 3 124 -19 201 74 0 0 chr5 33602029 33602056 -169483476 + (CATG)n Simple_repeat Simple_repeat 2 28 0 2441 173 63 4 chr5 33602903 33603424 -169482108 + MER57B-int LTR ERV1 3592 4143 -3673 * 15419 132 32 45 chr5 33603422 33603666 -169481866 + MER57B-int LTR ERV1 1853 2099 -5438 2281 103 0 0 chr5 33603666 33603957 -169481575 + AluY SINE Alu 1 291 -20 15419 132 32 45 chr5 33603957 33604066 -169481466 + MER57B-int LTR ERV1 2099 2208 -5329 2240 111 3 0 chr5 33604066 33604355 -169481177 + AluSp SINE Alu 1 290 -23 15419 132 32 45 chr5 33604355 33604790 -169480742 + MER57B-int LTR ERV1 2208 2647 -4890 2582 56 0 3 chr5 33604790 33605093 -169480439 - AluY SINE Alu -9 302 1 15419 132 32 45 chr5 33605093 33606025 -169479507 + MER57B-int LTR ERV1 2647 3590 -3947 5290 106 28 7 chr5 33606025 33606788 -169478744 + MER4E LTR ERV1 1 779 0 15419 132 32 45 chr5 33606788 33608032 -169477500 + MER57B-int LTR ERV1 3590 7146 -391 739 114 23 38 chr5 33608032 33608163 -169477369 + LTR54B LTR ERV1 3 131 -367 1391 108 147 9 chr5 33608166 33608398 -169477134 + MER57B-int LTR ERV1 7274 7537 0 2528 127 13 80 chr5 33608398 33608662 -169476870 + MER57B LTR ERV1 1 222 -212 2515 57 0 3 chr5 33608662 33608961 -169476571 - AluY SINE Alu -13 298 1 2528 127 13 80 chr5 33608961 33609159 -169476373 + MER57B LTR ERV1 222 432 -2 180 0 0 0 chr5 33609192 33609212 -169476320 + (TA)n Simple_repeat Simple_repeat 1 20 0 1482 213 7 0 chr5 33609336 33609613 -169475919 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 33609619 33609640 -169475892 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 2261 99 0 0 chr5 33609821 33610137 -169475395 + AluSx SINE Alu 1 316 0 744 176 0 8 chr5 33610394 33610519 -169475013 + FLAM_A SINE Alu 1 124 -9 240 214 0 0 chr5 33612350 33612406 -169473126 + (CA)n Simple_repeat Simple_repeat 1 56 0 266 276 13 0 chr5 33612995 33613071 -169472461 + MIR SINE MIR 69 145 -63 2486 81 3 0 chr5 33613595 33613905 -169471627 + AluSx SINE Alu 1 311 -1 2183 128 0 0 chr5 33613916 33614214 -169471318 + AluSx SINE Alu 1 298 -14 1906 163 0 0 chr5 33614591 33614917 -169470615 - AluJb SINE Alu 0 326 1 2506 78 3 0 chr5 33614926 33615233 -169470299 - AluY SINE Alu -3 308 1 2018 115 4 4 chr5 33615321 33615599 -169469933 + AluSx SINE Alu 35 312 0 668 270 77 31 chr5 33615692 33615914 -169469618 - MIR SINE MIR -27 235 4 250 259 80 33 chr5 33615927 33615972 -169469560 - L1MC/D LINE L1 -526 5595 5554 1647 149 101 4 chr5 33615972 33616248 -169469284 - AluSx SINE Alu -9 303 1 250 259 80 33 chr5 33616248 33616352 -169469180 - L1MC/D LINE L1 -567 5554 5499 769 197 0 0 chr5 33616956 33617088 -169468444 + AluJb SINE Alu 2 133 -179 2484 92 0 0 chr5 33617134 33617437 -169468095 - AluSp SINE Alu -5 308 6 208 247 148 37 chr5 33617512 33617593 -169467939 - L2 LINE L2 -1 3271 3182 27 0 0 0 chr5 33618035 33618062 -169467470 + AT_rich Low_complexity Low_complexity 1 27 0 648 106 0 0 chr5 33618108 33618202 -169467330 - AluY SINE Alu 0 311 218 210 226 36 12 chr5 33618811 33618895 -169466637 + (CA)n Simple_repeat Simple_repeat 1 86 0 340 289 58 42 chr5 33622361 33622402 -169463130 - MLT1L LTR MaLR -248 367 328 2623 146 19 5 chr5 33622402 33622820 -169462712 + MER61B LTR ERV1 1 424 -1 340 289 58 42 chr5 33622820 33622968 -169462564 - MLT1L LTR MaLR -287 328 175 416 156 0 0 chr5 33622997 33623061 -169462471 + MER5A DNA MER1_type 17 80 -109 1416 164 0 9 chr5 33623067 33623298 -169462234 + AluSx SINE Alu 11 239 -73 439 150 21 34 chr5 33623326 33623426 -169462106 + MER5A DNA MER1_type 50 151 -32 2062 186 55 4 chr5 33625091 33625543 -169459989 + L1 LINE L1 3991 4465 -1681 274 148 229 0 chr5 33625575 33625636 -169459896 + AluJ/FRAM SINE Alu 223 297 -5 1979 118 14 3 chr5 33625641 33625938 -169459594 + AluSx SINE Alu 7 306 -6 1356 118 99 9 chr5 33625939 33626160 -169459372 + MSTA LTR MaLR 188 428 0 863 162 42 65 chr5 33626161 33626377 -169459155 - MSTB1 LTR MaLR -221 211 1 828 190 86 19 chr5 33626805 33627027 -169458505 + MER21B LTR ERV1 548 857 -74 275 181 69 0 chr5 33627113 33627185 -169458347 + L1MC4 LINE L1 7965 8041 -1 2026 122 24 0 chr5 33627193 33627487 -169458045 + AluSx SINE Alu 1 301 -11 428 125 16 0 chr5 33627943 33628007 -169457525 + MLT2B2 LTR ERVL 348 412 -103 366 115 0 0 chr5 33628010 33628071 -169457461 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 2086 145 163 62 chr5 33628074 33628517 -169457015 - MLT2B3 LTR ERVL 0 554 53 1948 127 18 0 chr5 33628517 33628800 -169456732 - AluSx SINE Alu -15 297 10 2086 145 163 62 chr5 33628800 33628859 -169456673 - MLT2B3 LTR ERVL -501 53 1 295 167 0 0 chr5 33628861 33628909 -169456623 + MLT2C2 LTR ERVL 417 464 0 311 143 102 92 chr5 33628909 33629007 -169456525 + L1MB3 LINE L1 6084 6182 -1 1393 172 14 27 chr5 33629588 33629885 -169455647 + AluJo SINE Alu 1 293 -19 526 100 56 0 chr5 33629897 33629987 -169455545 + L1MB4 LINE L1 6086 6180 0 11510 71 26 6 chr5 33631085 33632683 -169452849 + HERV9 LTR ERV1 3049 4678 -3721 1498 174 40 16 chr5 33632894 33633198 -169452334 - L1MB7 LINE L1 -62 6122 5812 3205 128 81 40 chr5 33633205 33633683 -169451849 - L1MB2 LINE L1 -3 6168 5654 1835 120 35 7 chr5 33633683 33633967 -169451565 - AluSx SINE Alu -20 292 1 3205 128 81 40 chr5 33633967 33634154 -169451378 - L1MB2 LINE L1 -517 5654 5476 243 88 0 0 chr5 33634154 33634188 -169451344 + (TTCCC)n Simple_repeat Simple_repeat 3 36 0 226 135 39 19 chr5 33634190 33634242 -169451290 - L1MB2 LINE L1 -692 5488 5436 985 196 25 0 chr5 33634244 33634443 -169451089 - AluJb SINE Alu -19 293 90 1456 263 34 17 chr5 33634867 33635278 -169450254 + MER20B DNA MER1_type 4 421 -362 944 71 0 0 chr5 33635301 33635414 -169450118 + AluSp SINE Alu 1 113 -200 1783 127 28 31 chr5 33635417 33635708 -169449824 - AluSx SINE Alu -22 290 1 1303 267 59 44 chr5 33635719 33636132 -169449400 - L1ME3A LINE L1 0 6170 5744 1728 157 53 58 chr5 33636132 33636174 -169449358 - THE1C LTR MaLR 0 375 334 2052 118 42 0 chr5 33636174 33636461 -169449071 + AluSx SINE Alu 1 299 -13 1728 157 53 58 chr5 33636461 33636795 -169448737 - THE1C LTR MaLR -41 334 1 1303 267 59 44 chr5 33636795 33636954 -169448578 - L1ME3A LINE L1 -426 5744 5589 861 48 105 0 chr5 33638899 33639023 -169446509 + MER85 DNA T2_type 1 137 -2 21 0 0 0 chr5 33640743 33640764 -169444768 + AT_rich Low_complexity Low_complexity 1 21 0 194 311 143 8 chr5 33641156 33641275 -169444257 - MIR SINE MIR -9 253 119 623 86 0 0 chr5 33641285 33641366 -169444166 - MER51B LTR ERV1 -296 81 1 269 135 0 0 chr5 33642960 33642997 -169442535 - MER57A LTR ERV1 -72 331 295 2204 114 10 0 chr5 33644891 33645197 -169440335 + AluSx SINE Alu 1 309 -3 777 249 0 6 chr5 33645629 33645798 -169439734 - FAM SINE Alu -5 170 3 266 203 62 16 chr5 33645858 33645922 -169439610 - L1MC4 LINE L1 -35 8007 7941 * 407 255 166 6 chr5 33645903 33646060 -169439472 - L1MC4 LINE L1 -306 7736 7555 2536 65 3 0 chr5 33646322 33646628 -169438904 - AluY SINE Alu -3 308 2 2210 83 7 3 chr5 33646735 33647023 -169438509 - AluSg1 SINE Alu -9 300 12 2153 125 14 0 chr5 33647403 33647700 -169437832 - AluSx SINE Alu -11 301 1 308 203 40 0 chr5 33647709 33647783 -169437749 - L1MC4 LINE L1 -1 8041 7965 2974 216 88 23 chr5 33647870 33648607 -169436925 - MER21B LTR ERV1 -60 803 19 277 250 87 0 chr5 33648652 33648744 -169436788 - L1MC4 LINE L1 -124 7918 7819 1279 142 132 43 chr5 33648757 33648955 -169436577 - Charlie1 DNA MER1_type -193 2568 2332 1912 130 56 0 chr5 33648955 33649240 -169436292 - AluSq SINE Alu -11 302 2 1279 142 132 43 chr5 33649240 33649344 -169436188 - Charlie1 DNA MER1_type -429 2332 2239 1135 228 32 4 chr5 33649338 33649588 -169435944 - Charlie1 DNA MER1_type -810 1951 1695 * 969 257 130 25 chr5 33649588 33650027 -169435505 - L1MC4 LINE L1 -213 7829 7345 2664 48 0 3 chr5 33650029 33650340 -169435192 - AluY SINE Alu -1 310 1 1927 159 0 10 chr5 33650352 33650666 -169434866 - AluSx SINE Alu -1 311 1 796 269 93 41 chr5 33650759 33651176 -169434356 + ERVL LTR ERVL 4941 5379 -385 242 285 125 35 chr5 33651602 33651802 -169433730 + LTR33 LTR ERVL 302 519 -2 259 197 239 0 chr5 33653510 33653627 -169431905 - MER5C DNA MER1_type -51 273 129 1682 201 3 7 chr5 33653959 33654257 -169431275 - AluJo SINE Alu -15 297 1 24 32 0 0 chr5 33654260 33654291 -169431241 + AT_rich Low_complexity Low_complexity 1 31 0 1714 104 0 0 chr5 33654595 33654816 -169430716 - AluSx SINE Alu -91 221 1 1886 219 86 39 chr5 33654822 33655066 -169430466 - L1MC4a LINE L1 0 7808 7577 2381 97 0 3 chr5 33655066 33655376 -169430156 - AluSg SINE Alu -1 309 1 243 0 0 0 chr5 33655382 33655409 -169430123 + (TG)n Simple_repeat Simple_repeat 2 28 0 1886 219 86 39 chr5 33655409 33655692 -169429840 - L1MC4a LINE L1 -235 7573 7249 499 291 126 34 chr5 33655692 33656074 -169429458 - L2 LINE L2 -2790 524 108 451 242 198 13 chr5 33656100 33656257 -169429275 + MER5A DNA MER1_type 4 189 0 2207 126 0 0 chr5 33656388 33656689 -169428843 - AluSx SINE Alu -11 301 1 361 296 117 11 chr5 33656763 33656942 -169428590 + LTR67 LTR ERVL 353 550 -7 433 254 196 0 chr5 33657371 33657509 -169428023 - L1ME3A LINE L1 -171 5999 5835 299 230 27 0 chr5 33657552 33657626 -169427906 - L1ME3A LINE L1 -304 5866 5791 960 85 46 8 chr5 33658105 33658235 -169427297 + AluJb SINE Alu 1 135 -177 481 240 16 24 chr5 33659164 33659289 -169426243 - L2 LINE L2 -1 3312 3189 434 172 101 10 chr5 33659289 33659388 -169426144 + MER3 DNA MER1_type 1 108 -101 800 144 7 55 chr5 33659496 33659642 -169425890 - L1ME3A LINE L1 -544 5640 5502 1878 163 21 6 chr5 33660118 33660450 -169425082 - L1MC1 LINE L1 -11 6322 5986 294 347 72 16 chr5 33660459 33660652 -169424880 - L3 LINE CR1 -113 1464 1261 204 238 0 95 chr5 33661601 33661685 -169423847 - L3b LINE CR1 -131 1452 1377 441 265 0 26 chr5 33662220 33662337 -169423195 + MIR SINE MIR 46 159 -103 442 250 0 0 chr5 33663439 33663531 -169422001 - Charlie5 DNA MER1_type -2520 92 1 2742 62 10 77 chr5 33663603 33664007 -169421525 + MER51B LTR ERV1 1 377 0 347 230 103 85 chr5 33664038 33664203 -169421329 - MER102b DNA MER1_type -20 321 154 1690 123 20 0 chr5 33665072 33665316 -169420216 + AluSx SINE Alu 64 312 0 243 88 0 0 chr5 33669029 33669063 -169416469 + (TAA)n Simple_repeat Simple_repeat 2 35 0 288 290 0 11 chr5 33669769 33669862 -169415670 + MER103 DNA DNA 37 128 -38 227 222 81 71 chr5 33669976 33670075 -169415457 - MLT1K LTR MaLR -8 580 481 784 214 45 0 chr5 33670105 33670283 -169415249 - MIR SINE MIR -1 261 76 1510 130 88 77 chr5 33670508 33670793 -169414739 + AluSx SINE Alu 1 288 -24 1853 211 54 44 chr5 33671982 33672166 -169413366 - MLT1D LTR MaLR 0 505 324 816 152 0 0 chr5 33672166 33672291 -169413241 - FLAM_C SINE Alu -6 127 3 1853 211 54 44 chr5 33672291 33672604 -169412928 - MLT1D LTR MaLR -181 324 3 242 314 92 16 chr5 33673015 33673200 -169412332 + L1MC/D LINE L1 5703 5901 -1907 2188 85 0 31 chr5 33673356 33673704 -169411828 - AluSx SINE Alu 0 339 1 2245 113 0 3 chr5 33674134 33674435 -169411097 - AluSg SINE Alu -10 300 1 693 124 0 0 chr5 33675638 33675735 -169409797 + AluJ/FLAM SINE Alu 3 99 -213 188 100 25 0 chr5 33675742 33675782 -169409750 + (TA)n Simple_repeat Simple_repeat 1 41 0 2026 104 4 11 chr5 33675788 33676066 -169409466 - AluSx SINE Alu -36 276 1 1299 140 9 28 chr5 33676414 33676628 -169408904 - AluJo SINE Alu -19 293 84 383 177 0 0 chr5 33676703 33676765 -169408767 - AluJ/FLAM SINE Alu -239 63 2 304 250 39 10 chr5 33676784 33676888 -169408644 - L1MC4a LINE L1 -571 7237 7131 * 325 257 164 7 chr5 33676862 33677014 -169408518 - L1MC4 LINE L1 -953 7089 6914 429 66 0 0 chr5 33677093 33677154 -169408378 + Alu SINE Alu 241 301 -11 2679 55 0 0 chr5 33677158 33677468 -169408064 - AluY SINE Alu -1 310 1 1436 186 81 95 chr5 33677471 33677571 -169407961 - L1MC4 LINE L1 -1135 6907 6807 1196 181 67 0 chr5 33677571 33677809 -169407723 - L1MD1 LINE L1 0 6242 5989 1436 186 81 95 chr5 33677809 33677865 -169407667 - L1MC4 LINE L1 -1235 6807 6752 2020 124 7 0 chr5 33677865 33678202 -169407330 + AluSx SINE Alu 1 339 0 1436 186 81 95 chr5 33678202 33678473 -169407059 - L1MC4 LINE L1 -1290 6752 6484 2026 152 0 0 chr5 33678871 33679181 -169406351 + AluJo SINE Alu 1 310 -2 1658 188 3 3 chr5 33679184 33679466 -169406066 - AluJb SINE Alu -30 282 1 2436 93 0 0 chr5 33679937 33680238 -169405294 - AluSx SINE Alu -9 303 3 2421 56 3 20 chr5 33681159 33681462 -169404070 - AluY SINE Alu -13 298 1 402 21 0 0 chr5 33681519 33681566 -169403966 + (CA)n Simple_repeat Simple_repeat 2 48 0 220 234 47 0 chr5 33681642 33681706 -169403826 + MIR SINE MIR 129 195 -67 1894 142 31 0 chr5 33681903 33682192 -169403340 + AluJb SINE Alu 1 298 -14 202 274 20 0 chr5 33682334 33682385 -169403147 - MIR3 SINE MIR -16 192 141 346 255 194 44 chr5 33682399 33682559 -169402973 - MER20B DNA MER1_type -30 189 2 231 240 125 10 chr5 33682559 33682663 -169402869 - MIR SINE MIR -57 151 36 23 68 0 0 chr5 33683763 33683807 -169401725 + AT_rich Low_complexity Low_complexity 1 44 0 303 286 0 60 chr5 33684037 33684170 -169401362 - MARNA DNA Mariner -41 545 421 23 54 0 0 chr5 33684249 33684286 -169401246 + AT_rich Low_complexity Low_complexity 1 37 0 2619 68 0 0 chr5 33684424 33684735 -169400797 + AluSx SINE Alu 1 311 -1 23 33 0 0 chr5 33685161 33685191 -169400341 + AT_rich Low_complexity Low_complexity 1 30 0 248 277 96 11 chr5 33685257 33685351 -169400181 - MARNA DNA Mariner -141 445 344 296 185 25 49 chr5 33685727 33685808 -169399724 + LTR67 LTR ERVL 459 537 -20 557 219 0 62 chr5 33686018 33686178 -169399354 + MIR SINE MIR 64 213 -49 1082 313 68 8 chr5 33687807 33688272 -169397260 + HERVL LTR ERVL 2648 3156 -2329 357 268 52 20 chr5 33688331 33688484 -169397048 - L1ME4a LINE L1 0 6121 5964 347 87 0 0 chr5 33688544 33688590 -169396942 - L1MB1 LINE L1 -1 6167 6122 2198 113 3 0 chr5 33688593 33688886 -169396646 - AluSx SINE Alu -18 294 1 1597 175 20 34 chr5 33689402 33689699 -169395833 + AluJb SINE Alu 1 293 -19 2530 51 0 3 chr5 33690065 33690360 -169395172 + AluY SINE Alu 1 294 -17 860 230 38 49 chr5 33690374 33690639 -169394893 + MER74B LTR ERVL 356 617 -5 1805 151 3 33 chr5 33690652 33690956 -169394576 - AluJo SINE Alu -4 308 14 1997 122 42 0 chr5 33691606 33691892 -169393640 + AluSx SINE Alu 2 299 -13 242 258 81 0 chr5 33692137 33692199 -169393333 + MIR3 SINE MIR 101 167 -41 1278 134 0 26 chr5 33692297 33692538 -169392994 - AluSp SINE Alu -11 302 1 1814 130 8 8 chr5 33692617 33692879 -169392653 + AluSx SINE Alu 40 301 -11 526 298 63 38 chr5 33693062 33693300 -169392232 + MIR SINE MIR 19 262 0 22 0 0 0 chr5 33693383 33693405 -169392127 + AT_rich Low_complexity Low_complexity 1 22 0 2837 129 41 0 chr5 33693665 33694131 -169391401 + MER31A LTR ERV1 1 485 0 285 356 108 0 chr5 33694761 33694955 -169390577 - LTR16C LTR ERVL -200 291 77 2634 111 8 3 chr5 33695496 33695858 -169389674 - THE1B LTR MaLR 0 364 1 1837 144 58 55 chr5 33696112 33696182 -169389350 - THE1B LTR MaLR 0 364 296 2315 109 0 3 chr5 33696182 33696484 -169389048 + AluSx SINE Alu 1 301 -11 1837 144 58 55 chr5 33696484 33696774 -169388758 - THE1B LTR MaLR -68 296 3 11367 103 13 5 chr5 33696776 33698343 -169387189 - THE1B-int LTR MaLR 0 1580 1 1981 150 42 33 chr5 33698343 33698704 -169386828 - THE1B LTR MaLR 0 364 1 380 159 3 0 chr5 33698869 33698933 -169386599 - FLAM SINE Alu -6 127 71 2376 193 219 101 chr5 33698933 33699024 -169386508 - LTR28 LTR ERV1 0 1020 941 10675 103 17 0 chr5 33699024 33701381 -169384151 - L1PA8 LINE L1 -1 6171 3771 2376 193 219 101 chr5 33701381 33702201 -169383331 - LTR28 LTR ERV1 -79 941 1 39762 152 44 35 chr5 33702204 33704557 -169380975 - LTR28-int LTR ERV1 -3 7088 4758 2145 114 7 3 chr5 33704557 33704855 -169380677 - AluSx SINE Alu -13 299 1 39762 152 44 35 chr5 33704855 33708569 -169376963 - LTR28-int LTR ERV1 -2333 4758 947 212 0 36 0 chr5 33708569 33708597 -169376935 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 39762 152 44 35 chr5 33708597 33709548 -169375984 - LTR28-int LTR ERV1 -6144 947 6 641 191 7 29 chr5 33709551 33709687 -169375845 - LTR28 LTR ERV1 0 1020 888 397 211 135 10 chr5 33709668 33709772 -169375760 + LTR28 LTR ERV1 903 1019 -1 * 544 97 0 0 chr5 33709773 33709845 -169375687 - AluJ/FLAM SINE Alu -238 74 3 2116 112 103 23 chr5 33709873 33709946 -169375586 + MER51B LTR ERV1 2 68 -309 1993 138 10 3 chr5 33709946 33710243 -169375289 + AluSq SINE Alu 1 299 -14 2116 112 103 23 chr5 33710243 33710517 -169375015 + MER51B LTR ERV1 68 377 0 591 274 85 13 chr5 33710712 33711098 -169374434 - ERVL LTR ERVL -838 4926 4439 1296 293 52 3 chr5 33711156 33711542 -169373990 - ERVL LTR ERVL -1468 4296 3892 646 292 185 21 chr5 33711557 33711882 -169373650 - MLT1J LTR MaLR -5 506 129 350 280 87 65 chr5 33711922 33712137 -169373395 - ERVL LTR ERVL -3192 2572 2348 2743 56 18 0 chr5 33712137 33712475 -169373057 - LTR14A LTR ERVK 0 344 1 350 280 87 65 chr5 33712475 33712534 -169372998 - ERVL LTR ERVL -3416 2348 2292 3692 86 317 2 chr5 33712702 33713330 -169372202 - LTR12 LTR ERV1 0 826 1 6996 101 14 7 chr5 33713489 33714664 -169370868 - HERV9 LTR ERV1 0 8399 504 732 148 108 22 chr5 33714662 33714940 -169370592 - HERV9 LTR ERV1 -5755 1141 840 * 441 61 45 0 chr5 33714933 33714999 -169370533 - HERV9 LTR ERV1 -3445 4954 4886 * 12387 105 10 10 chr5 33714995 33717790 -169367742 - HERV9 LTR ERV1 -1949 489 17 3972 108 209 17 chr5 33717790 33718483 -169367049 - LTR12 LTR ERV1 0 826 1 1081 227 30 44 chr5 33718669 33718964 -169366568 - pTR5 LTR ERV1 -1410 1028 738 398 345 38 51 chr5 33718958 33719311 -169366221 - ERVL LTR ERVL -3396 2089 1743 * 689 269 0 6 chr5 33719513 33719669 -169365863 - MER96 DNA MER1_type? -14 161 7 695 254 203 20 chr5 33719871 33720166 -169365366 + LTR16A LTR ERVL 90 438 -12 2223 298 40 44 chr5 33720182 33721107 -169364425 + HERV16 LTR ERVL 5 925 -4071 560 276 77 15 chr5 33721228 33721424 -169364108 + HERV16 LTR ERVL 2322 2529 -2467 341 353 15 7 chr5 33721496 33721632 -169363900 - ERVL LTR ERVL -1908 3856 3720 261 327 9 71 chr5 33721799 33721866 -169363666 - ERVL LTR ERVL -4588 1176 1106 1389 178 58 101 chr5 33721866 33722281 -169363251 - MLT2C1 LTR ERVL 0 397 1 261 327 9 71 chr5 33722281 33722424 -169363108 - ERVL LTR ERVL -4658 1106 979 2116 129 0 0 chr5 33722842 33723122 -169362410 - AluSx SINE Alu -32 280 1 309 170 170 10 chr5 33723467 33723567 -169361965 - LTR67 LTR ERVL -14 543 428 1471 164 13 0 chr5 33723666 33723898 -169361634 + MSTB1 LTR MaLR 198 432 0 7987 201 54 11 chr5 33723898 33725481 -169360051 + MSTB1-int LTR MaLR 1 1651 0 32 0 0 0 chr5 33725688 33725720 -169359812 + AT_rich Low_complexity Low_complexity 1 32 0 3095 67 5 7 chr5 33725724 33726128 -169359404 - L1PA7 LINE L1 0 6154 5752 1847 162 22 48 chr5 33726128 33726486 -169359046 + MSTB1 LTR MaLR 44 392 -40 1441 183 37 26 chr5 33726493 33726766 -169358766 + AluJo SINE Alu 14 289 -23 379 80 0 0 chr5 33726766 33726816 -169358716 + MSTB1 LTR MaLR 383 432 0 246 371 0 0 chr5 33726919 33727035 -169358497 + (TTAGGG)n Simple_repeat Simple_repeat 1 116 0 204 324 15 0 chr5 33727784 33727852 -169357680 + L2 LINE L2 3204 3272 0 241 224 0 17 chr5 33728003 33728061 -169357471 + LTR33A LTR ERVL 444 500 -23 312 306 22 22 chr5 33730345 33730479 -169355053 - MLT1J LTR MaLR -377 134 1 552 219 115 74 chr5 33730794 33731303 -169354229 + MLT1H LTR MaLR 20 549 0 225 348 11 11 chr5 33731520 33731612 -169353920 + MLT1K LTR MaLR 186 277 -311 1881 135 7 7 chr5 33732972 33733261 -169352271 + AluJb SINE Alu 5 293 -19 21 0 0 0 chr5 33734658 33734679 -169350853 + AT_rich Low_complexity Low_complexity 1 21 0 16501 143 19 15 chr5 33734685 33735386 -169350146 - L1MA3 LINE L1 0 7724 7027 2385 84 0 13 chr5 33735386 33735697 -169349835 - AluY SINE Alu -4 307 1 16501 143 19 15 chr5 33735697 33739417 -169346115 - L1MA3 LINE L1 -697 7027 3273 1866 108 0 21 chr5 33739417 33739696 -169345836 - L1PA8 LINE L1 0 6172 5900 16501 143 19 15 chr5 33739696 33740538 -169344994 - L1MA3 LINE L1 -4451 3273 2436 6538 55 0 0 chr5 33740525 33741311 -169344221 - L1PA6 LINE L1 0 6154 5369 * 7484 122 3 4 chr5 33741312 33742383 -169343149 - L1MA3 LINE L1 -5101 2464 1395 6708 26 0 4 chr5 33742390 33743162 -169342370 - L1PA3 LINE L1 -3 6152 5384 * 8939 150 9 21 chr5 33743161 33744500 -169341032 - L1MA3 LINE L1 -6151 1414 91 297 0 0 0 chr5 33744500 33744533 -169340999 + (TG)n Simple_repeat Simple_repeat 2 34 0 8939 150 9 21 chr5 33744533 33744610 -169340922 - L1MA3 LINE L1 -7474 91 15 3380 156 76 19 chr5 33745077 33745469 -169340063 + HSMAR2 DNA Mariner 3 444 -858 3027 109 26 12 chr5 33745469 33745891 -169339641 - MSTA LTR MaLR 0 428 1 3380 156 76 19 chr5 33745891 33746113 -169339419 + HSMAR2 DNA Mariner 444 652 -650 2097 155 70 8 chr5 33746110 33746496 -169339036 + MSTA LTR MaLR 19 428 0 * 3854 134 59 11 chr5 33746499 33747113 -169338419 + HSMAR2 DNA Mariner 657 1299 -3 31 44 0 0 chr5 33747411 33747456 -169338076 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 33747547 33747568 -169337964 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 33748126 33748146 -169337386 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr5 33748571 33748600 -169336932 + AT_rich Low_complexity Low_complexity 1 29 0 193 287 115 11 chr5 33748725 33748812 -169336720 + MIR3 SINE MIR 92 187 -21 221 171 0 0 chr5 33749513 33749554 -169335978 + T-rich Low_complexity Low_complexity 1 41 0 357 82 0 0 chr5 33751009 33751058 -169334474 + (TG)n Simple_repeat Simple_repeat 1 49 0 203 133 0 44 chr5 33751311 33751356 -169334176 + (CACCC)n Simple_repeat Simple_repeat 3 45 0 189 107 0 0 chr5 33751678 33751706 -169333826 + (T)n Simple_repeat Simple_repeat 1 28 0 225 159 0 0 chr5 33751968 33752012 -169333520 + (CGG)n Simple_repeat Simple_repeat 1 44 0 400 309 58 5 chr5 33754988 33755176 -169330356 + MIR SINE MIR 59 256 -6 24 53 0 0 chr5 33755725 33755763 -169329769 + AT_rich Low_complexity Low_complexity 1 38 0 597 248 146 36 chr5 33756367 33756641 -169328891 - HAL1 LINE L1 -35 2472 2169 748 129 86 17 chr5 33756642 33756758 -169328774 + FAM SINE Alu 37 160 -25 469 269 48 14 chr5 33756767 33756975 -169328557 - HAL1 LINE L1 -335 2172 1958 12382 65 19 4 chr5 33756980 33758634 -169326898 - L1PA6 LINE L1 -3 6151 4470 189 0 0 0 chr5 33758634 33758655 -169326877 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 12382 65 19 4 chr5 33758655 33759325 -169326207 - L1PA6 LINE L1 -1684 4470 3812 1142 274 71 16 chr5 33759325 33760023 -169325509 - HAL1 LINE L1 -647 1860 1063 22 0 0 0 chr5 33760806 33760828 -169324704 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 33761037 33761080 -169324452 + AT_rich Low_complexity Low_complexity 1 43 0 1435 187 73 11 chr5 33761511 33761784 -169323748 + AluSx SINE Alu 1 290 -22 1251 243 91 32 chr5 33761861 33762235 -169323297 - MSTD LTR MaLR 0 396 1 447 220 10 33 chr5 33763814 33763949 -169321583 - L1MC4 LINE L1 0 8040 7880 438 176 0 0 chr5 33763966 33764051 -169321481 + CT-rich Low_complexity Low_complexity 3 87 0 1890 246 72 56 chr5 33764078 33764774 -169320758 - L1MC4 LINE L1 -115 7927 7221 2634 131 45 0 chr5 33765005 33765409 -169320123 + L1PA16 LINE L1 5743 6164 -2 328 246 58 92 chr5 33765668 33765908 -169319624 - MER112 DNA MER1_type -6 254 23 249 282 0 39 chr5 33765886 33765964 -169319568 - MER112 DNA MER1_type -185 75 1 * 536 236 107 96 chr5 33766855 33767259 -169318273 - L1ME4a LINE L1 -22 6099 5579 1798 166 0 10 chr5 33767259 33767555 -169317977 - AluJb SINE Alu -13 299 7 536 236 107 96 chr5 33767555 33767659 -169317873 - L1ME4a LINE L1 -542 5579 5478 343 302 98 34 chr5 33767666 33767901 -169317631 - L1ME4a LINE L1 -1639 4507 4258 265 274 40 40 chr5 33767901 33768025 -169317507 - L1P LINE L1 -1924 4222 4099 248 154 13 90 chr5 33768063 33768141 -169317391 - L1ME4a LINE L1 -2160 3986 3915 402 310 27 46 chr5 33768159 33768311 -169317221 - L1ME4a LINE L1 -2302 3844 3698 2352 100 0 3 chr5 33768311 33768612 -169316920 + AluSq SINE Alu 1 300 -13 402 310 27 46 chr5 33768612 33768720 -169316812 - L1ME4a LINE L1 -2448 3698 3589 1630 178 24 18 chr5 33768809 33768867 -169316665 - L1MD3 LINE L1 -2 7993 7937 1444 161 64 67 chr5 33768867 33768947 -169316585 - MER46B DNA MER2_type -2496 235 156 207 0 0 0 chr5 33768947 33768970 -169316562 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 357 24 0 0 chr5 33768969 33769011 -169316521 + (TA)n Simple_repeat Simple_repeat 1 42 0 1444 161 64 67 chr5 33768970 33769149 -169316383 - MER46B DNA MER2_type -2575 156 141 2792 19 0 0 chr5 33769149 33769460 -169316072 - AluYa5 SINE Alu 0 311 1 1444 161 64 67 chr5 33769460 33769601 -169315931 - MER46B DNA MER2_type -2590 141 1 1630 178 24 18 chr5 33769601 33769618 -169315914 - L1MD3 LINE L1 -58 7937 7922 2021 164 29 26 chr5 33769618 33769965 -169315567 - MER7A DNA MER2_type 0 346 1 1630 178 24 18 chr5 33769965 33770226 -169315306 - L1MD3 LINE L1 -73 7922 7654 2474 228 48 43 chr5 33770240 33771070 -169314462 + L1M4 LINE L1 3787 4620 -1526 719 204 68 37 chr5 33771090 33771281 -169314251 - L1MC4a LINE L1 -314 7494 7298 293 288 117 55 chr5 33771541 33771704 -169313828 + MIR SINE MIR 86 258 -4 566 281 81 94 chr5 33771923 33772074 -169313458 - MLT1J LTR MaLR -58 453 302 2926 13 0 0 chr5 33772074 33772390 -169313142 + AluYb8 SINE Alu 1 316 -2 566 281 81 94 chr5 33772390 33772697 -169312835 - MLT1J LTR MaLR -209 302 1 2230 105 0 0 chr5 33772921 33773256 -169312276 - AluSq SINE Alu 0 335 1 557 304 43 0 chr5 33774018 33774179 -169311353 + MIR SINE MIR 32 199 -63 246 286 14 14 chr5 33774443 33774513 -169311019 - L2 LINE L2 -3 3310 3241 256 335 92 49 chr5 33774670 33774771 -169310761 + L2 LINE L2 1862 1957 -1357 1062 153 89 11 chr5 33774771 33774961 -169310571 + MER3 DNA MER1_type 3 207 -2 256 335 92 49 chr5 33774961 33775369 -169310163 + L2 LINE L2 1957 2393 -921 336 192 55 89 chr5 33775528 33775674 -169309858 - L1ME4a LINE L1 -1 6120 5980 2435 100 0 0 chr5 33776060 33776370 -169309162 + AluSx SINE Alu 1 310 -2 226 146 21 21 chr5 33777019 33777067 -169308465 + MIR SINE MIR 215 262 0 463 284 35 14 chr5 33777889 33778030 -169307502 + MIR SINE MIR 81 224 -38 26 0 0 0 chr5 33778030 33778056 -169307476 + AT_rich Low_complexity Low_complexity 1 26 0 1998 58 17 0 chr5 33778249 33778489 -169307043 - L1PA7 LINE L1 0 6154 5911 1033 167 0 0 chr5 33779998 33780160 -169305372 - AluJb SINE Alu -19 293 132 229 337 43 11 chr5 33780288 33780380 -169305152 + MIR SINE MIR 21 115 -147 1286 146 82 63 chr5 33780629 33780944 -169304588 - MER33 DNA MER1_type 0 324 4 1945 151 3 3 chr5 33781248 33781539 -169303993 + AluJb SINE Alu 1 291 -21 23 33 0 0 chr5 33781763 33781793 -169303739 + AT_rich Low_complexity Low_complexity 1 30 0 665 186 65 0 chr5 33781877 33782001 -169303531 - FLAM_A SINE Alu -1 132 1 779 211 0 0 chr5 33782452 33782575 -169302957 + FLAM_A SINE Alu 1 123 -10 41 82 0 0 chr5 33782588 33782685 -169302847 + AT_rich Low_complexity Low_complexity 1 97 0 304 332 25 40 chr5 33782690 33782889 -169302643 - L1 LINE L1 -2000 4146 3951 1149 178 39 27 chr5 33783302 33783560 -169301972 - L1MD2 LINE L1 -3 6356 6096 337 185 67 74 chr5 33783562 33783697 -169301835 - L1 LINE L1 -2210 3936 3803 2405 99 0 0 chr5 33784101 33784405 -169301127 - AluSc SINE Alu -5 304 1 219 323 121 36 chr5 33784446 33784669 -169300863 + MIR SINE MIR 2 243 -19 444 282 77 89 chr5 33784811 33785059 -169300473 + L2 LINE L2 2993 3237 -35 198 118 0 0 chr5 33785076 33785110 -169300422 + (TTA)n Simple_repeat Simple_repeat 2 35 0 233 314 0 0 chr5 33785122 33785192 -169300340 - MIR3 SINE MIR -47 161 92 840 251 35 92 chr5 33787170 33787689 -169297843 - HAL1 LINE L1 -46 2461 1973 702 263 86 8 chr5 33787856 33787872 -169297660 - HAL1 LINE L1 -821 1686 1673 1823 169 7 0 chr5 33787872 33788167 -169297365 - AluJb SINE Alu -14 298 2 702 263 86 8 chr5 33788167 33788393 -169297139 - HAL1 LINE L1 -834 1673 1425 715 250 51 76 chr5 33788400 33788867 -169296665 - LTR33A LTR ERVL 0 523 1 878 211 87 26 chr5 33788938 33789204 -169296328 - HAL1 LINE L1 -1247 1260 979 507 254 17 28 chr5 33789211 33789388 -169296144 + MER104 DNA Tc2 6 180 0 1444 254 74 105 chr5 33789424 33790269 -169295263 - HAL1 LINE L1 -1539 968 155 1873 111 0 25 chr5 33790269 33790549 -169294983 - AluSx SINE Alu -39 273 1 1444 254 74 105 chr5 33790549 33790654 -169294878 - HAL1 LINE L1 -2352 155 48 2268 110 0 16 chr5 33792033 33792351 -169293181 + AluSq SINE Alu 1 313 0 198 0 0 0 chr5 33793720 33793742 -169291790 + (T)n Simple_repeat Simple_repeat 1 22 0 2436 67 0 0 chr5 33794954 33795251 -169290281 - AluY SINE Alu -14 297 1 241 298 43 11 chr5 33795800 33795894 -169289638 + L2 LINE L2 1992 2088 -1226 30008 45 2 1 chr5 33795897 33800145 -169285387 - L1PA5 LINE L1 -202 5952 1700 2919 219 64 32 chr5 33800123 33801872 -169283660 - L1ME2 LINE L1 -331 5767 636 * 7286 59 3 52 chr5 33801885 33803378 -169282154 - L1PA7 LINE L1 -2 6152 4698 1413 169 48 54 chr5 33803391 33803705 -169281827 - AluSx SINE Alu 0 312 1 512 278 46 45 chr5 33803708 33804004 -169281528 - L1ME2 LINE L1 -4932 769 498 682 287 69 75 chr5 33804147 33804597 -169280935 - L1ME2 LINE L1 -5539 531 83 2427 100 0 0 chr5 33804597 33804908 -169280624 + AluSq SINE Alu 1 311 -2 682 287 69 75 chr5 33804908 33804980 -169280552 - L1ME2 LINE L1 -5987 83 12 705 230 54 29 chr5 33805852 33806056 -169279476 - LTR33 LTR ERVL 0 521 313 401 213 90 25 chr5 33806167 33806289 -169279243 - LTR33 LTR ERVL -389 132 3 186 43 0 0 chr5 33806715 33806738 -169278794 + (TTA)n Simple_repeat Simple_repeat 2 24 0 272 257 92 18 chr5 33807452 33807561 -169277971 + MIR SINE MIR 144 260 -2 304 266 0 0 chr5 33807569 33807633 -169277899 - MER103 DNA DNA -95 71 8 2028 155 7 0 chr5 33810241 33810544 -169274988 + AluJb SINE Alu 1 305 -7 223 281 18 96 chr5 33810793 33810960 -169274572 + L3b LINE CR1 1276 1429 -154 607 286 108 9 chr5 33812297 33812510 -169273022 - MIR SINE MIR 0 262 29 496 281 29 7 chr5 33812824 33812963 -169272569 - MIR SINE MIR -19 243 102 403 316 60 24 chr5 33813880 33814048 -169271484 - MIR SINE MIR -13 249 76 316 182 15 15 chr5 33815060 33815126 -169270406 + MIR SINE MIR 158 223 -39 1957 112 0 8 chr5 33815387 33815655 -169269877 - AluSq SINE Alu -15 298 33 1947 121 0 4 chr5 33815686 33815951 -169269581 - AluSx SINE Alu -10 302 39 684 278 53 60 chr5 33816204 33816671 -169268861 - L1ME4a LINE L1 -166 5955 5492 1333 229 100 35 chr5 33816746 33817356 -169268176 - L2 LINE L2 0 3313 2662 315 232 184 24 chr5 33817408 33817533 -169267999 + MIR3 SINE MIR 47 191 -17 201 284 0 15 chr5 33819863 33819930 -169265602 + (TAA)n Simple_repeat Simple_repeat 2 67 0 629 256 23 17 chr5 33819952 33820128 -169265404 - MIR SINE MIR -50 212 36 233 163 0 0 chr5 33821352 33821395 -169264137 + MIR SINE MIR 111 153 -109 482 66 11 154 chr5 33821634 33821725 -169263807 + MADE1 DNA Mariner 3 80 0 462 245 68 62 chr5 33823815 33824007 -169261525 + MIR SINE MIR 18 210 -52 1753 143 8 0 chr5 33824285 33824543 -169260989 - AluSx SINE Alu -14 298 39 2131 122 10 16 chr5 33825231 33825543 -169259989 - AluSx SINE Alu -2 310 1 2250 109 3 0 chr5 33832822 33833116 -169252416 - AluSx SINE Alu -17 295 1 274 242 220 0 chr5 33833388 33833479 -169252053 + MIR SINE MIR 126 236 -26 250 329 14 36 chr5 33834675 33834815 -169250717 - MIR SINE MIR -7 255 119 31727 114 21 75 chr5 33834819 33839692 -169245840 + L1PA8A LINE L1 9 4430 -1701 360 0 0 0 chr5 33839692 33839732 -169245800 + (CA)n Simple_repeat Simple_repeat 1 40 0 31727 114 21 75 chr5 33839732 33841342 -169244190 + L1PA8A LINE L1 4430 6126 -5 334 191 15 15 chr5 33841371 33841439 -169244093 - MER116 DNA Mariner -12 68 1 2368 118 3 3 chr5 33841796 33842128 -169243404 - THE1B LTR MaLR -32 332 1 506 195 0 0 chr5 33842408 33842495 -169243037 - MIR SINE MIR -130 132 46 184 346 82 33 chr5 33842597 33842756 -169242776 + L2 LINE L2 2555 2732 -582 3225 161 78 19 chr5 33842756 33843334 -169242198 + LTR9 LTR ERV1 1 612 0 184 346 82 33 chr5 33843334 33843417 -169242115 + L2 LINE L2 2732 2809 -505 330 301 35 0 chr5 33844177 33844290 -169241242 + MIR SINE MIR 57 173 -89 640 149 0 0 chr5 33844488 33844582 -169240950 - LTR12 LTR ERV1 -133 581 488 345 221 71 71 chr5 33844582 33844709 -169240823 - LTR30 LTR ERV1 -67 655 553 791 117 0 209 chr5 33844796 33845026 -169240506 - LTR12 LTR ERV1 -480 234 53 265 231 0 0 chr5 33845026 33845078 -169240454 - LTR30 LTR ERV1 -670 52 1 536 222 142 12 chr5 33845203 33845365 -169240167 - MIR SINE MIR -70 192 10 1669 156 10 50 chr5 33845673 33845974 -169239558 - AluJb SINE Alu -23 289 1 1910 196 20 58 chr5 33846989 33847165 -169238367 - MER63B DNA MER1_type -631 431 250 6745 92 21 21 chr5 33847165 33848352 -169237180 - L1PA13 LINE L1 0 6163 4977 1910 196 20 58 chr5 33848352 33848623 -169236909 - MER63B DNA MER1_type -812 250 1 2159 111 7 7 chr5 33849590 33849888 -169235644 - AluSx SINE Alu -14 298 1 2458 87 0 0 chr5 33850221 33850520 -169235012 + AluSc SINE Alu 1 299 -10 823 255 17 62 chr5 33852110 33852400 -169233132 - L1MEd LINE L1 -5837 282 6 4390 158 8 12 chr5 33853309 33854030 -169231502 - L1MB2 LINE L1 -8 6163 5446 2732 84 14 0 chr5 33855045 33855390 -169230142 + THE1A LTR MaLR 3 352 -3 8858 88 9 2 chr5 33855393 33856560 -169228972 + THE1A-int LTR MaLR 1 1175 -405 180 0 0 0 chr5 33856864 33856884 -169228648 + (A)n Simple_repeat Simple_repeat 1 20 0 236 363 70 6 chr5 33856887 33857044 -169228488 - L2 LINE L2 -508 2806 2640 436 325 0 12 chr5 33857049 33857209 -169228323 - L2 LINE L2 -912 2402 2245 210 37 0 0 chr5 33857224 33857251 -169228281 + (GA)n Simple_repeat Simple_repeat 1 27 0 202 274 16 32 chr5 33857427 33857489 -169228043 + L3 LINE CR1 1515 1575 -2 1949 123 29 16 chr5 33857849 33858157 -169227375 - AluSx SINE Alu 0 312 1 1725 160 77 3 chr5 33858441 33858753 -169226779 + MER47A DNA MER2_type 1 335 -31 27 29 0 0 chr5 33859210 33859244 -169226288 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 33860000 33860030 -169225502 + AT_rich Low_complexity Low_complexity 1 30 0 384 294 0 0 chr5 33860325 33860434 -169225098 - MIR3 SINE MIR -12 196 88 2075 261 63 15 chr5 33860537 33861078 -169224454 - MLT1E LTR MaLR 0 593 27 394 311 60 38 chr5 33861156 33861339 -169224193 + L3 LINE CR1 569 755 -822 2126 203 73 13 chr5 33862112 33862590 -169222942 + MER92B LTR ERV1 5 511 -125 210 136 0 0 chr5 33862590 33862634 -169222898 + (T)n Simple_repeat Simple_repeat 1 44 0 11663 16 0 0 chr5 33862634 33864729 -169220803 - L1HS LINE L1 0 6155 4061 * 27608 36 38 2 chr5 33864721 33868099 -169217433 + L1HS LINE L1 576 4074 -2072 521 192 8 7 chr5 33868099 33868252 -169217280 + MER92B LTR ERV1 506 636 0 288 53 0 0 chr5 33868594 33868632 -169216900 + (TG)n Simple_repeat Simple_repeat 2 39 0 415 244 76 0 chr5 33868751 33868870 -169216662 + L3 LINE CR1 771 898 -679 371 200 0 24 chr5 33868899 33868984 -169216548 - MLT1K LTR MaLR 0 588 506 285 263 43 120 chr5 33869578 33869787 -169215745 + L3 LINE CR1 1062 1254 -323 1237 106 28 0 chr5 33869856 33870035 -169215497 - THE1C LTR MaLR -191 184 1 526 226 65 96 chr5 33870720 33870981 -169214551 - MER112 DNA MER1_type -7 253 1 183 80 0 0 chr5 33871837 33871862 -169213670 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 256 229 24 48 chr5 33872982 33873065 -169212467 + GA-rich Low_complexity Low_complexity 4 84 0 187 256 0 0 chr5 33873434 33873477 -169212055 + L2 LINE L2 3267 3309 -4 761 203 184 0 chr5 33875390 33875548 -169209984 + MER5A DNA MER1_type 1 187 -2 2479 51 3 10 chr5 33875720 33876031 -169209501 - AluY SINE Alu -1 310 2 240 243 0 0 chr5 33876076 33876150 -169209382 + CT-rich Low_complexity Low_complexity 4 77 0 611 258 74 93 chr5 33876167 33876585 -169208947 + MLT1K LTR MaLR 71 480 -108 399 269 131 3 chr5 33877947 33878104 -169207428 - MIR SINE MIR -56 206 34 225 295 137 0 chr5 33879095 33879190 -169206342 - MIR SINE MIR -49 213 106 982 131 91 11 chr5 33879458 33879633 -169205899 - MER53 DNA DNA 0 189 1 508 239 191 21 chr5 33879741 33879929 -169205603 + MIR SINE MIR 33 252 -10 222 239 0 15 chr5 33879995 33880062 -169205470 + (TA)n Simple_repeat Simple_repeat 2 67 0 180 219 0 0 chr5 33880669 33880710 -169204822 + CT-rich Low_complexity Low_complexity 5 45 0 776 160 0 16 chr5 33880842 33880967 -169204565 + FLAM_A SINE Alu 1 123 -10 2235 99 3 3 chr5 33880977 33881269 -169204263 + AluSq SINE Alu 1 292 -21 2238 79 14 0 chr5 33881334 33881625 -169203907 - AluY SINE Alu -16 295 1 826 272 105 8 chr5 33882003 33882242 -169203290 + MER45C DNA AcHobo 1 262 -691 554 271 93 73 chr5 33882318 33882441 -169203091 + MER45C DNA AcHobo 693 812 -769 1845 151 10 3 chr5 33882441 33882733 -169202799 + AluJo SINE Alu 1 294 -18 554 271 93 73 chr5 33882733 33882856 -169202676 + MER45C DNA AcHobo 812 944 -9 327 270 88 57 chr5 33886207 33886366 -169199166 + L2 LINE L2 2924 3087 -185 1210 305 35 13 chr5 33886460 33886857 -169198675 + LTR16A LTR ERVL 29 434 -16 344 270 36 80 chr5 33886868 33887005 -169198527 + L2 LINE L2 3140 3270 -2 564 225 16 8 chr5 33887191 33887320 -169198212 - LTR33 LTR ERVL -11 510 381 641 155 8 0 chr5 33888491 33888620 -169196912 + CT-rich Low_complexity Low_complexity 3 132 0 626 278 94 28 chr5 33888634 33888889 -169196643 - L2 LINE L2 0 3313 3042 802 269 115 45 chr5 33889126 33889906 -169195626 + L2 LINE L2 2458 3301 -12 211 194 0 0 chr5 33889943 33889979 -169195553 + (CA)n Simple_repeat Simple_repeat 2 37 0 1496 192 2 86 chr5 33890057 33890453 -169195079 + MLT1A2 LTR MaLR 1 363 -11 322 167 36 12 chr5 33891087 33891171 -169194361 - L1MA4A LINE L1 -27 6276 6191 274 327 78 13 chr5 33891209 33891362 -169194170 + MIR SINE MIR 78 240 -22 389 242 223 40 chr5 33892960 33893204 -169192328 + Charlie8 DNA MER1_type 1 279 -2138 463 170 94 9 chr5 33893370 33893476 -169192056 + MIR SINE MIR 124 238 -24 218 289 52 41 chr5 33893626 33893723 -169191809 - L2 LINE L2 -1 3271 3174 409 191 83 0 chr5 33893917 33894001 -169191531 + MER63 DNA MER1_type 661 751 -310 281 247 71 0 chr5 33894114 33894199 -169191333 - MIR SINE MIR -109 153 63 1482 262 82 28 chr5 33894277 33894847 -169190685 + HAL1 LINE L1 1658 2267 -240 243 0 0 0 chr5 33894847 33894874 -169190658 + (TG)n Simple_repeat Simple_repeat 1 27 0 1482 262 82 28 chr5 33894874 33894936 -169190596 + HAL1 LINE L1 2267 2324 -183 236 261 70 14 chr5 33894937 33895079 -169190453 + L1MC/D LINE L1 5136 5285 -861 * 826 198 0 21 chr5 33895066 33895258 -169190274 + L1 LINE L1 4507 4694 -1452 352 291 108 15 chr5 33895372 33895576 -169189956 + L1MC/D LINE L1 5263 5484 -2301 1950 167 16 29 chr5 33895601 33895979 -169189553 - L1MB2 LINE L1 -14 6157 5785 562 102 18 73 chr5 33895983 33896333 -169189199 + (TATAA)n Simple_repeat Simple_repeat 1 330 0 3817 110 5 90 chr5 33898841 33899761 -169185771 - L1P LINE L1 -3242 2904 2063 4767 224 50 16 chr5 33900006 33901359 -169184173 - L1 LINE L1 -1895 4251 2853 266 176 40 0 chr5 33901607 33901681 -169183851 + L1P LINE L1 4618 4694 -1452 391 297 61 38 chr5 33901789 33902001 -169183531 + L1MC/D LINE L1 5265 5481 -2327 1789 167 16 29 chr5 33902026 33902404 -169183128 - L1MB2 LINE L1 -14 6157 5785 457 152 47 0 chr5 33902440 33902611 -169182921 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 464 152 42 0 chr5 33902624 33902789 -169182743 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 419 236 17 22 chr5 33902836 33903014 -169182518 + (CATATA)n Simple_repeat Simple_repeat 2 178 0 5931 199 19 14 chr5 33903016 33904854 -169180678 - L1MB2 LINE L1 -378 5793 3952 337 328 37 21 chr5 33904904 33905093 -169180439 + L1MC/D LINE L1 5560 5751 -2057 11802 197 39 9 chr5 33905126 33906829 -169178703 - L1PA16 LINE L1 -9 6157 4508 240 35 0 0 chr5 33906829 33906858 -169178674 + (TG)n Simple_repeat Simple_repeat 2 30 0 11802 197 39 9 chr5 33906858 33908910 -169176622 - L1PA16 LINE L1 -1658 4508 2291 442 265 141 18 chr5 33909107 33909277 -169176255 - MIR SINE MIR -70 192 2 2206 114 7 0 chr5 33909386 33909685 -169175847 + AluSx SINE Alu 1 301 -11 776 194 92 20 chr5 33909890 33910086 -169175446 - MER6B DNA MER2_type 0 210 1 221 178 0 22 chr5 33910913 33910958 -169174574 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 362 247 12 0 chr5 33910988 33911069 -169174463 - L2 LINE L2 -37 3235 3154 442 248 26 9 chr5 33912636 33912749 -169172783 + MIR3 SINE MIR 82 196 -12 984 239 0 0 chr5 33913088 33913276 -169172256 - MER5A DNA MER1_type -1 188 1 445 259 161 0 chr5 33913575 33913687 -169171845 - MER45A DNA AcHobo -45 133 4 26 30 0 0 chr5 33913922 33913955 -169171577 + AT_rich Low_complexity Low_complexity 1 33 0 279 390 21 0 chr5 33913965 33914060 -169171472 + L2 LINE L2 3154 3250 -22 217 294 39 0 chr5 33914295 33914346 -169171186 + MIR SINE MIR 20 72 -190 352 333 22 7 chr5 33914757 33914895 -169170637 - Charlie8 DNA MER1_type -2277 140 1 975 224 25 57 chr5 33915155 33915436 -169170096 - MLT1A2 LTR MaLR -102 272 1 705 326 89 59 chr5 33915794 33916707 -169168825 - L2 LINE L2 -495 2819 1880 241 276 8 73 chr5 33918624 33918747 -169166785 - MIR SINE MIR -16 246 132 293 237 26 13 chr5 33918767 33918843 -169166689 + MIR3 SINE MIR 115 191 -17 2218 140 5 60 chr5 33919033 33919272 -169166260 - MLT1B LTR MaLR 0 390 182 2258 129 27 16 chr5 33919272 33919643 -169165889 + THE1C LTR MaLR 1 375 0 2218 140 5 60 chr5 33919643 33919816 -169165716 - MLT1B LTR MaLR -208 182 1 429 302 7 4 chr5 33919849 33920006 -169165526 - MIR3 SINE MIR -64 144 4 24 53 0 0 chr5 33920929 33920967 -169164565 + AT_rich Low_complexity Low_complexity 1 38 0 239 247 39 0 chr5 33922270 33922347 -169163185 - L1M4 LINE L1 -876 5270 5191 1744 109 37 56 chr5 33922362 33922486 -169163046 - L1MA5A LINE L1 -3 6936 6811 1738 108 119 4 chr5 33922486 33922746 -169162786 - AluSq SINE Alu -23 290 1 1744 109 37 56 chr5 33922746 33922942 -169162590 - L1MA5A LINE L1 -128 6811 6622 1668 131 4 69 chr5 33922944 33923364 -169162168 + MER1B DNA MER1_type 1 339 0 4243 139 19 16 chr5 33923364 33924734 -169160798 - L1MA5A LINE L1 -312 6627 5249 422 49 16 0 chr5 33924736 33924797 -169160735 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 7051 58 0 0 chr5 33924919 33926393 -169159139 + L1PA6 LINE L1 4685 6161 0 1322 201 63 26 chr5 33926414 33926683 -169158849 - AluJo SINE Alu -30 282 4 11417 183 23 17 chr5 33926685 33929110 -169156422 - L1MA5A LINE L1 -1532 5256 2818 765 187 0 29 chr5 33929127 33929266 -169156266 - FLAM_C SINE Alu -8 135 1 2158 188 39 0 chr5 33929271 33929713 -169155819 - L1MA5A LINE L1 -3962 2827 2369 6041 153 21 14 chr5 33929887 33930968 -169154564 - L1MA5A LINE L1 -4455 2334 1246 797 196 77 0 chr5 33930971 33931165 -169154367 - L1M4 LINE L1 -960 5186 4978 1444 236 40 9 chr5 33931166 33931514 -169154018 - MLT1A2 LTR MaLR -4 370 12 2681 216 14 14 chr5 33931525 33932132 -169153400 - L1M4 LINE L1 -1161 4985 4376 2360 86 0 29 chr5 33932132 33932447 -169153085 - AluY SINE Alu -5 306 1 2681 216 14 14 chr5 33932447 33932495 -169153037 - L1M4 LINE L1 -1769 4377 4330 21 71 0 0 chr5 33932552 33932594 -169152938 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 33932681 33932703 -169152829 + AT_rich Low_complexity Low_complexity 1 22 0 380 311 71 39 chr5 33933032 33933244 -169152288 + MIR SINE MIR 18 247 -15 328 255 0 41 chr5 33934998 33935096 -169150436 - MLT1I LTR MaLR -6 403 310 279 200 0 0 chr5 33935092 33935137 -169150395 - MLT1J1 LTR MaLR -136 310 266 * 355 283 42 25 chr5 33935225 33935345 -169150187 - MLT1J2 LTR MaLR -306 144 23 1021 290 127 20 chr5 33935418 33935934 -169149598 + L2 LINE L2 2739 3313 0 2029 233 76 14 chr5 33936218 33936716 -169148816 + MLT1F LTR MaLR 1 529 -13 318 241 0 38 chr5 33936830 33936909 -169148623 - 7SK RNA RNA -116 77 2 190 359 0 43 chr5 33937767 33937859 -169147673 - L3b LINE CR1 -141 1442 1355 31926 110 11 59 chr5 33939382 33945855 -169139677 - L1PA7 LINE L1 -4 6150 2 21 0 0 0 chr5 33946152 33946173 -169139359 + AT_rich Low_complexity Low_complexity 1 21 0 2187 148 13 24 chr5 33946356 33946735 -169138797 - THE1C LTR MaLR 0 375 1 4455 159 126 33 chr5 33946740 33948124 -169137408 - THE1C-int LTR MaLR -5 1646 2 2222 119 16 49 chr5 33948125 33948511 -169137021 - THE1C LTR MaLR 0 375 3 387 304 106 55 chr5 33948691 33948859 -169136673 - LTR16C LTR ERVL -61 430 239 1047 230 5 0 chr5 33948859 33949081 -169136451 + MER58A DNA MER1_type 2 224 0 387 304 106 55 chr5 33949081 33949205 -169136327 - LTR16C LTR ERVL -252 239 123 612 266 192 6 chr5 33949404 33949793 -169135739 - L2 LINE L2 -2 3311 2705 240 237 18 53 chr5 33949795 33949808 -169135724 - L1MA10 LINE L1 0 6334 6322 2181 249 58 50 chr5 33949808 33951335 -169134197 - L1ME3 LINE L1 -1 6230 4700 435 259 89 19 chr5 33951562 33951879 -169133653 - L1ME3 LINE L1 -4551 1664 1441 314 338 89 67 chr5 33951921 33952447 -169133085 - L1ME3 LINE L1 -5551 845 308 390 288 12 35 chr5 33952495 33952665 -169132867 - L1ME3 LINE L1 -6194 202 37 2017 291 18 3 chr5 33952681 33953247 -169132285 - L2 LINE L2 -612 2702 2129 7123 55 5 70 chr5 33953655 33954808 -169130724 - L1PA6 LINE L1 -1 6153 5027 444 209 8 47 chr5 33955529 33955658 -169129874 + L1MC4 LINE L1 7797 7920 -122 263 250 15 0 chr5 33955661 33955729 -169129803 + GA-rich Low_complexity Low_complexity 2 70 0 180 200 0 0 chr5 33955837 33955877 -169129655 + (CA)n Simple_repeat Simple_repeat 1 40 0 352 265 11 119 chr5 33956603 33956788 -169128744 - MER5A DNA MER1_type -7 182 18 185 333 20 88 chr5 33956785 33956932 -169128600 - L2 LINE L2 -2 3270 3134 * 509 279 181 24 chr5 33957004 33957258 -169128274 - L2 LINE L2 -7 3306 3013 259 284 0 49 chr5 33957381 33957462 -169128070 + L2 LINE L2 3237 3313 0 2342 27 0 0 chr5 33957817 33958111 -169127421 - L1PA2 LINE L1 -995 5151 4858 * 4817 12 1 0 chr5 33958105 33958809 -169126723 + L1PA2 LINE L1 5125 5829 -326 2857 12 0 0 chr5 33958925 33959274 -169126258 + L1PA2 LINE L1 5833 6181 0 2619 191 17 65 chr5 33959412 33960055 -169125477 + LTR9 LTR ERV1 1 612 0 996 214 38 47 chr5 33960075 33960392 -169125140 + LTR9 LTR ERV1 299 612 0 3942 143 18 10 chr5 33961333 33962038 -169123494 + MER50 LTR ERV1 1 711 -23 1624 35 19 47 chr5 33962627 33962883 -169122649 + L1PA2 LINE L1 5907 6155 0 204 67 0 0 chr5 33962897 33962927 -169122605 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 30 0 0 0 chr5 33963237 33963267 -169122265 + AT_rich Low_complexity Low_complexity 1 30 0 440 217 217 15 chr5 33963305 33963508 -169122024 - L1ME2 LINE L1 -9 6155 5912 224 277 26 77 chr5 33963753 33963883 -169121649 + MIR SINE MIR 26 144 -64 364 200 13 0 chr5 33964263 33964338 -169121194 - MER69 DNA AcHobo 0 2526 2451 * 588 229 36 7 chr5 33964336 33964476 -169121056 - MER69 DNA AcHobo -1079 147 4 1262 146 4 34 chr5 33966066 33966299 -169119233 - AluJb SINE Alu -2 310 85 3228 56 5 12 chr5 33966587 33967014 -169118518 - L1PA4 LINE L1 0 6155 5732 23 33 0 0 chr5 33967176 33967206 -169118326 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr5 33967232 33967256 -169118276 + AT_rich Low_complexity Low_complexity 1 24 0 1625 153 57 45 chr5 33967291 33967624 -169117908 - MER44D DNA MER2_type -2 607 1 213 312 128 37 chr5 33967910 33968019 -169117513 + L2 LINE L2 3153 3271 -1 375 321 170 0 chr5 33968613 33968772 -169116760 + L3 LINE CR1 334 519 -1058 337 287 35 21 chr5 33968812 33968955 -169116577 - L1ME3A LINE L1 -15 6155 6011 926 295 46 34 chr5 33969049 33969523 -169116009 - L1ME3A LINE L1 -208 5962 5483 234 352 21 4 chr5 33969731 33969852 -169115680 - MIR SINE MIR -67 141 32 234 313 38 0 chr5 33970176 33970256 -169115276 + MIR SINE MIR 64 146 -62 6218 87 11 2 chr5 33971725 33973025 -169112507 - L1PA12 LINE L1 -1 6167 4855 1011 179 10 0 chr5 33973028 33973235 -169112297 + L1PA12 LINE L1 4644 4852 -1294 21 0 0 0 chr5 33974019 33974040 -169111492 + AT_rich Low_complexity Low_complexity 1 21 0 2069 238 86 29 chr5 33974184 33974293 -169111239 - L1MB8 LINE L1 -12 6166 6065 2138 136 0 7 chr5 33974293 33974595 -169110937 - AluSx SINE Alu -12 300 1 2069 238 86 29 chr5 33974595 33975926 -169109606 - L1MB8 LINE L1 -113 6065 4632 688 71 0 0 chr5 33975926 33976025 -169109507 - L1PB1 LINE L1 0 6151 6053 2069 238 86 29 chr5 33976025 33976165 -169109367 - L1MB8 LINE L1 -1546 4632 4501 * 2895 33 0 0 chr5 33976163 33976526 -169109006 + L1P LINE L1 3547 3909 -2237 814 169 0 0 chr5 33976606 33976730 -169108802 - AluSq/x SINE Alu -189 124 1 928 224 72 63 chr5 33976731 33977204 -169108328 - L1MB8 LINE L1 -1661 4485 4009 345 282 68 26 chr5 33977204 33977321 -169108211 - L1MCa LINE L1 -4050 2376 2255 512 281 25 51 chr5 33977548 33977901 -169107631 + L1M4 LINE L1 4890 5233 -913 2458 170 29 0 chr5 33978046 33978529 -169107003 - L1MB7 LINE L1 -27 6157 5661 393 159 0 0 chr5 33978539 33978608 -169106924 - L1MA9 LINE L1 -5 6307 6239 2043 123 68 0 chr5 33978634 33978926 -169106606 - AluSx SINE Alu 0 312 1 536 341 44 6 chr5 33979598 33979780 -169105752 + MIR3 SINE MIR 8 196 -12 272 340 0 10 chr5 33979940 33980037 -169105495 + MIR3 SINE MIR 104 199 -9 1838 129 0 58 chr5 33980065 33980215 -169105317 + AluJo SINE Alu 1 125 -187 2249 110 0 7 chr5 33980215 33980515 -169105017 + AluSq SINE Alu 3 300 -13 1838 129 0 58 chr5 33980515 33980673 -169104859 + AluJo SINE Alu 125 291 -21 247 278 28 65 chr5 33981309 33981417 -169104115 + MIR SINE MIR 148 251 -11 2196 91 0 17 chr5 33982811 33983098 -169102434 + AluY SINE Alu 1 282 -29 3721 42 0 19 chr5 33983099 33983571 -169101961 + L1PA5 LINE L1 5691 6153 -1 251 337 93 54 chr5 33983673 33983878 -169101654 + L2 LINE L2 3017 3229 -43 805 257 22 6 chr5 33984013 33984196 -169101336 - MIR SINE MIR -61 201 16 417 237 38 15 chr5 33984488 33984619 -169100913 + MER94 DNA DNA 1 134 0 342 280 30 15 chr5 33984755 33984887 -169100645 + MARNA DNA Mariner 85 218 -368 214 286 86 0 chr5 33984896 33984966 -169100566 + L2 LINE L2 3188 3263 -9 24 0 0 0 chr5 33985203 33985227 -169100305 + AT_rich Low_complexity Low_complexity 1 24 0 446 294 25 6 chr5 33985273 33985436 -169100096 + MARNA DNA Mariner 408 573 -13 573 254 8 8 chr5 33987216 33987350 -169098182 + MIR SINE MIR 62 195 -67 374 306 30 17 chr5 33987748 33988045 -169097487 - L1M4 LINE L1 -3324 2822 2522 5153 75 11 2 chr5 33988046 33989387 -169096145 + L1PA4 LINE L1 4796 6173 -11 272 158 18 0 chr5 33989387 33989444 -169096088 + GA-rich Low_complexity Low_complexity 5 62 0 822 153 6 12 chr5 33989455 33989625 -169095907 + GA-rich Low_complexity Low_complexity 2 170 0 661 267 148 18 chr5 33989815 33990092 -169095440 - L2 LINE L2 -2 3311 2999 638 279 98 80 chr5 33990534 33991047 -169094485 - LTR33A LTR ERVL 0 523 2 314 335 30 55 chr5 33991090 33991290 -169094242 - MIR SINE MIR -19 243 49 205 182 0 0 chr5 33991330 33991374 -169094158 + (TA)n Simple_repeat Simple_repeat 1 44 0 890 189 0 30 chr5 33991408 33991572 -169093960 - AluJb SINE Alu -18 294 136 1598 165 3 49 chr5 33991576 33991903 -169093629 - AluJb SINE Alu 0 312 1 2380 89 0 3 chr5 33992592 33992894 -169092638 - AluSg SINE Alu -9 301 1 26 30 0 0 chr5 33992920 33992953 -169092579 + AT_rich Low_complexity Low_complexity 1 33 0 2627 58 0 0 chr5 33992953 33993282 -169092250 - L1PA4 LINE L1 -3 6152 5824 1843 187 56 58 chr5 33993704 33994206 -169091326 + MLT1D LTR MaLR 5 505 0 2379 82 0 16 chr5 33994268 33994584 -169090948 + AluY SINE Alu 1 311 0 624 284 100 38 chr5 33994594 33994914 -169090618 - MLT1J2 LTR MaLR -1 449 110 653 220 41 86 chr5 33994964 33995255 -169090277 + MLT1D LTR MaLR 5 282 -223 464 216 32 16 chr5 33995254 33995379 -169090153 - MLT1J2 LTR MaLR -323 127 1 * 236 291 0 0 chr5 33995523 33995612 -169089920 + MIR SINE MIR 79 166 -74 282 208 39 0 chr5 33995787 33995864 -169089668 - MER116 DNA Mariner 0 80 1 515 240 71 39 chr5 33996003 33996157 -169089375 + L2 LINE L2 3154 3312 -1 363 330 98 15 chr5 33996488 33996691 -169088841 - L3b LINE CR1 -80 1503 1284 21 0 0 0 chr5 33997144 33997165 -169088367 + AT_rich Low_complexity Low_complexity 1 21 0 1115 60 13 0 chr5 33998755 33998905 -169086627 + MER4E LTR ERV1 1 152 -627 2749 158 91 24 chr5 33998905 33999479 -169086053 - LTR9 LTR ERV1 0 612 1 * 3456 137 39 30 chr5 33999479 34000100 -169085432 + MER4E LTR ERV1 153 779 0 1618 139 35 4 chr5 34001268 34001526 -169084006 - Tigger4(Zombi) DNA MER2_type 0 2731 2466 209 336 104 32 chr5 34001835 34002055 -169083477 - L3b LINE CR1 -226 1357 1122 689 267 208 24 chr5 34002420 34002839 -169082693 - L2 LINE L2 -1625 1689 1194 5949 80 20 44 chr5 34003347 34003851 -169081681 - L1PA12 LINE L1 -1 6167 5693 2194 115 0 0 chr5 34003851 34004139 -169081393 - AluSx SINE Alu -23 289 2 5949 80 20 44 chr5 34004139 34004538 -169080994 - L1PA12 LINE L1 -475 5693 5286 194 315 82 0 chr5 34005183 34005256 -169080276 + L2 LINE L2 2768 2846 -468 24 67 0 0 chr5 34005450 34005495 -169080037 + AT_rich Low_complexity Low_complexity 1 45 0 1923 158 39 34 chr5 34005991 34006376 -169079156 - MLT1B LTR MaLR -2 388 2 1439 234 31 45 chr5 34009165 34009583 -169075949 + MER92A LTR ERV1 1 412 0 1039 281 82 0 chr5 34009583 34009935 -169075597 + L1ME3A LINE L1 5787 6167 -3 188 0 74 0 chr5 34010101 34010128 -169075404 + (TTTAA)n Simple_repeat Simple_repeat 5 33 0 2392 164 29 5 chr5 34010213 34010629 -169074903 - MSTB LTR MaLR 0 426 1 193 341 91 17 chr5 34011268 34011444 -169074088 - L2 LINE L2 -605 2709 2521 183 301 75 60 chr5 34011679 34011812 -169073720 + L2 LINE L2 3171 3305 -8 1704 244 80 75 chr5 34011854 34012772 -169072760 - L1MEc LINE L1 -2921 3294 2414 2739 187 52 9 chr5 34012772 34013312 -169072220 - MLT1F1 LTR MaLR -4 563 1 1704 244 80 75 chr5 34013312 34013560 -169071972 - L1MEc LINE L1 -3801 2414 2169 21 0 0 0 chr5 34013881 34013902 -169071630 + AT_rich Low_complexity Low_complexity 1 21 0 358 315 101 11 chr5 34013964 34014142 -169071390 - MIR SINE MIR -62 200 7 469 53 0 149 chr5 34014936 34014975 -169070557 + MADE1 DNA Mariner 1 20 -60 2375 90 3 0 chr5 34014975 34015276 -169070256 - AluSx SINE Alu -10 302 1 469 53 0 149 chr5 34015276 34015330 -169070202 + MADE1 DNA Mariner 20 80 0 1933 161 33 19 chr5 34016944 34017304 -169068228 - MLT1A1 LTR MaLR 0 365 1 460 247 19 56 chr5 34017581 34017743 -169067789 + MLT1D LTR MaLR 1 156 -349 373 167 28 0 chr5 34017742 34017814 -169067718 - MLT1F1 LTR MaLR -470 97 24 * 323 170 0 0 chr5 34017832 34017885 -169067647 - MLT1F1 LTR MaLR -52 415 363 608 160 20 0 chr5 34017889 34017989 -169067543 - MLT1F1 LTR MaLR -377 190 89 209 83 28 0 chr5 34018331 34018367 -169067165 + (CAAAA)n Simple_repeat Simple_repeat 5 41 0 2717 131 9 14 chr5 34018571 34019000 -169066532 - L1M1 LINE L1 -508 5797 5371 198 340 189 0 chr5 34020044 34020150 -169065382 + L2 LINE L2 3141 3266 -6 301 260 158 63 chr5 34021034 34021161 -169064371 + MIR SINE MIR 47 185 -77 1036 212 81 41 chr5 34021314 34021757 -169063775 - L1M4 LINE L1 -1548 4598 4138 1191 243 71 58 chr5 34021870 34022459 -169063073 - L1M4 LINE L1 -2446 3700 3104 900 184 7 0 chr5 34022908 34023055 -169062477 - FRAM SINE Alu -23 153 6 1426 198 0 11 chr5 34023061 34023324 -169062208 - AluJo SINE Alu -13 299 40 207 0 0 0 chr5 34023325 34023348 -169062184 + (A)n Simple_repeat Simple_repeat 1 23 0 762 167 0 8 chr5 34023369 34023501 -169062031 - FLAM_C SINE Alu -2 131 1 217 163 0 20 chr5 34023509 34023558 -169061974 + T-rich Low_complexity Low_complexity 1 48 0 453 327 123 14 chr5 34024466 34024686 -169060846 + L1MEc LINE L1 234 477 -5919 1141 241 45 58 chr5 34024697 34024990 -169060542 + L1MEc LINE L1 528 814 -5582 2080 132 0 0 chr5 34024990 34025279 -169060253 + AluSx SINE Alu 9 297 -15 1141 241 45 58 chr5 34025279 34025434 -169060098 + L1MEc LINE L1 814 970 -5426 485 278 91 62 chr5 34025490 34026008 -169059524 + L1MEc LINE L1 1103 1635 -4761 936 244 121 20 chr5 34026036 34026426 -169059106 + L1MEc LINE L1 1735 2163 -4233 679 239 63 9 chr5 34026425 34026647 -169058885 + L1MEc LINE L1 2832 3065 -3150 * 360 155 206 21 chr5 34026978 34027075 -169058457 - MIR SINE MIR -58 204 90 3650 142 43 64 chr5 34027516 34028299 -169057233 - L1MC2 LINE L1 0 6344 5578 268 206 0 0 chr5 34028299 34028362 -169057170 + L1 LINE L1 4408 4470 -1676 1302 220 27 54 chr5 34028372 34028867 -169056665 - L1 LINE L1 -1713 4433 3985 2665 7 3 10 chr5 34031040 34031338 -169054194 - AluYa5 SINE Alu -15 296 1 304 285 36 29 chr5 34031828 34031965 -169053567 - L1M4 LINE L1 -1037 5109 4972 3090 155 38 4 chr5 34031965 34032556 -169052976 + MER4B LTR ERV1 1 779 0 1284 259 46 35 chr5 34032556 34032639 -169052893 - L1M4 LINE L1 -1171 4975 4894 2209 63 30 20 chr5 34032639 34032938 -169052594 + AluY SINE Alu 1 302 -9 1284 259 46 35 chr5 34032938 34033394 -169052138 - L1M4 LINE L1 -1252 4894 4430 266 298 0 18 chr5 34033465 34033522 -169052010 - L2 LINE L2 -69 3203 3148 1060 216 168 17 chr5 34034095 34034121 -169051411 - L1MC4 LINE L1 -21 8021 8000 2469 156 24 5 chr5 34034121 34034539 -169050993 + MSTB LTR MaLR 1 426 0 1060 216 168 17 chr5 34034539 34034869 -169050663 - L1MC4 LINE L1 -42 8000 7611 814 182 38 94 chr5 34035343 34035537 -169049995 + LTR1B LTR ERV1 1 204 -622 312 102 0 0 chr5 34035537 34035586 -169049946 + (CA)n Simple_repeat Simple_repeat 2 50 0 814 182 38 94 chr5 34035586 34035790 -169049742 + LTR1B LTR ERV1 204 448 -378 3222 165 45 13 chr5 34036059 34036768 -169048764 + L1 LINE L1 4552 5283 -863 1789 142 7 84 chr5 34036768 34037184 -169048348 + L1PA16 LINE L1 5436 5819 -337 471 125 0 0 chr5 34037179 34037259 -169048273 + L1 LINE L1 4548 4627 -1519 * 1721 162 21 18 chr5 34037259 34037585 -169047947 + L1PA16 LINE L1 5815 6148 -18 36 70 0 0 chr5 34037586 34037657 -169047875 + AT_rich Low_complexity Low_complexity 1 71 0 1604 212 11 8 chr5 34037974 34038332 -169047200 + L1MC1 LINE L1 5975 6333 0 667 213 58 114 chr5 34040431 34040804 -169044728 - LTR33A LTR ERVL -37 486 189 357 24 0 0 chr5 34040804 34040846 -169044686 + (TG)n Simple_repeat Simple_repeat 2 43 0 667 213 58 114 chr5 34040846 34041026 -169044506 - LTR33A LTR ERVL -334 189 1 584 61 0 12 chr5 34041180 34041262 -169044270 + (TGGA)n Simple_repeat Simple_repeat 2 82 0 1571 146 22 4 chr5 34042020 34042295 -169043237 + L1MC3 LINE L1 7485 7764 -21 250 214 18 0 chr5 34042367 34042423 -169043109 - Charlie4 DNA MER1_type 0 1961 1905 368 273 14 50 chr5 34042602 34042659 -169042873 + MER94 DNA DNA 1 59 -75 1936 97 7 37 chr5 34042659 34042959 -169042573 + AluY SINE Alu 2 292 -19 368 273 14 50 chr5 34042959 34043040 -169042492 + MER94 DNA DNA 59 134 0 5385 113 16 5 chr5 34043433 34044350 -169041182 - L1PB1 LINE L1 -108 6043 5116 2358 120 47 3 chr5 34045072 34045455 -169040077 - L1MA6 LINE L1 -351 5949 5550 627 322 172 30 chr5 34045753 34046346 -169039186 + L3 LINE CR1 845 1521 -56 24 0 0 0 chr5 34046452 34046476 -169039056 + AT_rich Low_complexity Low_complexity 1 24 0 277 341 48 16 chr5 34047169 34047295 -169038237 - MIR SINE MIR -62 146 17 186 43 0 0 chr5 34047584 34047607 -169037925 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 946 227 115 38 chr5 34048002 34048455 -169037077 - L1M1 LINE L1 -3975 3590 3103 837 141 22 87 chr5 34048457 34048641 -169036891 + Tigger4(Zombi) DNA MER2_type 1 172 -2559 3353 102 32 34 chr5 34048641 34049197 -169036335 + Tigger4(Zombi) DNA MER2_type 2177 2731 0 2165 254 47 21 chr5 34049232 34049981 -169035551 - L1M2 LINE L1 -4172 2039 1272 1451 102 57 4 chr5 34050168 34050413 -169035119 - AluY SINE Alu -53 258 1 564 265 94 36 chr5 34051431 34051654 -169033878 + MIR SINE MIR 2 237 -25 862 124 7 36 chr5 34051692 34051829 -169033703 - AluJb SINE Alu -179 133 1 921 259 116 19 chr5 34052961 34053382 -169032150 - LTR16B LTR ERVL 0 464 3 468 223 129 77 chr5 34055925 34056158 -169029374 + LTR28 LTR ERV1 582 1019 0 191 372 13 0 chr5 34056384 34056462 -169029070 + L2 LINE L2 2454 2532 -782 3871 261 71 48 chr5 34056482 34057411 -169028121 + L1MEc LINE L1 29 935 -5461 2125 131 0 0 chr5 34057411 34057708 -169027824 + AluSq SINE Alu 1 297 -16 3871 261 71 48 chr5 34057708 34058697 -169026835 + L1MEc LINE L1 935 1991 -4405 5115 226 65 60 chr5 34058757 34060522 -169025010 + L1M4 LINE L1 87 1936 -4710 2335 73 0 0 chr5 34060522 34060811 -169024721 + AluY SINE Alu 17 305 -6 5115 226 65 60 chr5 34060811 34061514 -169024018 + L1M4 LINE L1 1936 2634 -4012 1100 117 166 54 chr5 34061510 34061536 -169023996 + L1M2 LINE L1 5144 5166 -1131 * 293 47 23 0 chr5 34061536 34061579 -169023953 + (CAA)n Simple_repeat Simple_repeat 3 46 0 1100 117 166 54 chr5 34061579 34062038 -169023494 + L1M2 LINE L1 5166 5670 -627 2747 229 75 10 chr5 34062273 34063311 -169022221 - L1M2 LINE L1 -4986 1155 1 299 311 126 40 chr5 34063739 34063961 -169021571 + LTR33A LTR ERVL 61 301 -222 1855 192 156 0 chr5 34064563 34065000 -169020532 + MLT1D LTR MaLR 1 505 0 325 227 10 41 chr5 34065553 34065650 -169019882 + CT-rich Low_complexity Low_complexity 2 95 0 1742 192 10 10 chr5 34065976 34066288 -169019244 - AluJo SINE Alu 0 312 1 21 0 0 0 chr5 34066399 34066420 -169019112 + AT_rich Low_complexity Low_complexity 1 21 0 7185 31 16 2 chr5 34067040 34068316 -169017216 + L1PA3 LINE L1 4868 6155 0 208 278 111 0 chr5 34068955 34069027 -169016505 + MIR SINE MIR 63 142 -120 23 33 0 0 chr5 34069766 34069796 -169015736 + AT_rich Low_complexity Low_complexity 1 30 0 336 299 277 11 chr5 34069833 34070104 -169015428 + L1MEd LINE L1 27 369 -5750 24 67 0 0 chr5 34070111 34070156 -169015376 + AT_rich Low_complexity Low_complexity 1 45 0 973 204 51 37 chr5 34070287 34070503 -169015029 - AluJo SINE Alu -21 291 73 562 286 49 30 chr5 34070848 34071051 -169014481 - MIR SINE MIR -21 241 35 24 0 0 0 chr5 34071459 34071483 -169014049 + AT_rich Low_complexity Low_complexity 1 24 0 1229 134 15 5 chr5 34072203 34072404 -169013128 + MER20 DNA MER1_type 17 219 0 752 228 73 45 chr5 34072745 34073075 -169012457 - MSTD LTR MaLR 0 396 21 2098 222 32 5 chr5 34073191 34073632 -169011900 - MSTD-int LTR MaLR -170 1565 1113 378 187 0 0 chr5 34073646 34073721 -169011811 - MSTC LTR MaLR -353 75 1 22 0 0 0 chr5 34074273 34074295 -169011237 + AT_rich Low_complexity Low_complexity 1 22 0 256 310 17 26 chr5 34074450 34074566 -169010966 - L2 LINE L2 -248 3065 2951 387 258 25 8 chr5 34074602 34074722 -169010810 - MER117 DNA MER1_type -42 155 34 5837 214 14 21 chr5 34075049 34076895 -169008637 + L1HS LINE L1 3981 5789 -362 495 0 0 0 chr5 34076895 34076950 -169008582 + (TA)n Simple_repeat Simple_repeat 2 56 0 5837 214 14 21 chr5 34076950 34077310 -169008222 + L1HS LINE L1 5789 6150 -1 194 296 14 0 chr5 34077640 34077711 -169007821 - MIR SINE MIR -135 127 56 231 324 145 17 chr5 34077881 34078060 -169007472 - L2 LINE L2 -363 2951 2750 531 243 138 28 chr5 34078415 34078633 -169006899 + MIR SINE MIR 21 262 0 386 313 136 28 chr5 34078973 34079149 -169006383 + MIR3 SINE MIR 6 200 -8 230 319 77 0 chr5 34079507 34079598 -169005934 - L2 LINE L2 -327 2986 2889 236 291 18 3 chr5 34080766 34080854 -169004678 - MIR SINE MIR -63 145 80 39 0 0 0 chr5 34080914 34080953 -169004579 + AT_rich Low_complexity Low_complexity 1 39 0 518 239 103 29 chr5 34081080 34081413 -169004119 - LTR33 LTR ERVL -8 513 99 1764 279 104 23 chr5 34081447 34082348 -169003184 + L2 LINE L2 2206 3179 -134 2697 7 0 10 chr5 34082726 34083025 -169002507 - AluYa5 SINE Alu -15 296 1 2086 114 132 26 chr5 34083663 34084050 -169001482 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr5 34085339 34085374 -169000158 + AT_rich Low_complexity Low_complexity 1 35 0 2297 88 3 0 chr5 34085615 34085911 -168999621 + AluY SINE Alu 1 297 -14 1997 229 96 21 chr5 34086167 34086784 -168998748 + L1MCb LINE L1 8 670 -5375 259 143 0 61 chr5 34086859 34086908 -168998624 + MLT2F LTR ERVL 583 663 0 635 163 37 0 chr5 34086922 34087057 -168998475 + L1MA8 LINE L1 6152 6291 0 294 239 0 0 chr5 34087595 34087666 -168997866 + ERVL LTR ERVL 853 923 -4841 2109 208 68 139 chr5 34087666 34088847 -168996685 - MER52A LTR ERV1 0 1755 659 252 217 17 0 chr5 34088981 34089041 -168996491 - MSTD LTR MaLR 0 396 336 7059 206 79 63 chr5 34089096 34091603 -168993929 - MER109 Unknown Unknown -80 2352 1 29 0 0 0 chr5 34092188 34092217 -168993315 + AT_rich Low_complexity Low_complexity 1 29 0 904 263 50 50 chr5 34092219 34092557 -168992975 - MSTD LTR MaLR -56 340 3 3441 274 43 39 chr5 34092563 34093952 -168991580 + ERVL LTR ERVL 1065 2497 -3267 291 302 0 12 chr5 34094684 34094770 -168990762 - ERVL LTR ERVL -4340 1424 1340 1258 158 64 63 chr5 34095216 34095603 -168989929 + L1MA4 LINE L1 5550 5939 -361 1879 148 24 30 chr5 34095849 34095951 -168989581 + L1MA4 LINE L1 5925 6026 -274 2416 101 0 26 chr5 34095951 34096297 -168989235 - MER1B DNA MER1_type 0 337 1 1879 148 24 30 chr5 34096297 34096567 -168988965 + L1MA4 LINE L1 6026 6295 -5 5543 242 20 102 chr5 34096704 34098960 -168986572 + L1M2a LINE L1 399 2470 -5096 2984 242 42 9 chr5 34098948 34100275 -168985257 + L1M2a LINE L1 2374 3752 -3813 * 8924 212 30 4 chr5 34100528 34103002 -168982530 + L1M2a LINE L1 3798 6384 -1181 995 272 178 24 chr5 34103161 34103672 -168981860 + MLT1G LTR MaLR 1 590 0 306 251 204 47 chr5 34103823 34104014 -168981518 + MIR SINE MIR 1 221 -41 728 89 9 0 chr5 34105193 34105326 -168980206 - L1PA2 LINE L1 0 6155 6043 3678 29 4 4 chr5 34105326 34105776 -168979756 + L1PA3 LINE L1 5413 5862 -293 492 179 0 11 chr5 34105904 34105999 -168979533 + L1MA4A LINE L1 3602 3695 -2451 1415 213 0 0 chr5 34106004 34106262 -168979270 + AluJo SINE Alu 43 300 -12 4493 216 16 10 chr5 34106262 34106546 -168978986 + L1MA4A LINE L1 3696 3977 -2169 2061 137 3 0 chr5 34106546 34106838 -168978694 + AluSx SINE Alu 1 293 -19 4493 216 16 10 chr5 34106838 34107595 -168977937 + L1MA4A LINE L1 3977 4744 -1402 2911 291 41 20 chr5 34107612 34108468 -168977064 + L1PA16 LINE L1 1 874 -5913 * 4336 230 39 15 chr5 34108444 34109649 -168975883 + L1PA16 LINE L1 1173 2416 -4381 * 4894 213 9 11 chr5 34109644 34110696 -168974836 + L1PA16 LINE L1 3921 4971 -1826 895 167 36 14 chr5 34110710 34110932 -168974600 + L1PA16 LINE L1 5756 5982 -815 1757 103 7 15 chr5 34111298 34111571 -168973961 + L1PA16 LINE L1 5948 6218 -598 58 59 0 8 chr5 34111582 34111665 -168973867 + AT_rich Low_complexity Low_complexity 1 84 -33 3041 150 63 7 chr5 34111665 34112237 -168973295 + L1PA16 LINE L1 6212 6815 -2 58 59 0 8 chr5 34112237 34112271 -168973261 + AT_rich Low_complexity Low_complexity 84 117 0 3032 192 75 5 chr5 34112295 34113584 -168971948 + L1MA4A LINE L1 4734 6293 -7 895 186 40 34 chr5 34113621 34113798 -168971734 + AluJo SINE Alu 1 178 -134 1392 191 36 18 chr5 34113801 34114079 -168971453 - AluJo SINE Alu -19 283 1 1397 257 77 80 chr5 34114140 34115194 -168970338 - HAL1 LINE L1 -2 2505 1455 1674 155 90 31 chr5 34115232 34115586 -168969946 + THE1C LTR MaLR 1 375 0 392 324 80 55 chr5 34115627 34115902 -168969630 - HAL1 LINE L1 -2224 283 2 6809 52 7 3 chr5 34115981 34117302 -168968230 - L1PA6 LINE L1 -2 6152 4828 4767 251 59 29 chr5 34118000 34119678 -168965854 + L1M4c LINE L1 1266 3204 -3178 2565 24 0 3 chr5 34119678 34119973 -168965559 + AluY SINE Alu 1 294 -17 4767 251 59 29 chr5 34119973 34121048 -168964484 + L1M4c LINE L1 3204 4246 -2136 18415 111 56 6 chr5 34121051 34124383 -168961149 + L1PBa LINE L1 36 3534 -3328 380 169 0 0 chr5 34124375 34124446 -168961086 + L1M4c LINE L1 3611 3681 -2701 * 2653 222 2 0 chr5 34124433 34125201 -168960331 + L1M4c LINE L1 4201 5124 -1258 229 154 108 0 chr5 34125196 34125261 -168960271 + L1MC3 LINE L1 7698 7769 -16 * 1365 241 46 9 chr5 34125320 34125756 -168959776 + L1ME2 LINE L1 5023 5474 -908 505 193 9 46 chr5 34125759 34125868 -168959664 - Tigger5 DNA MER2_type 0 2323 2219 287 222 0 16 chr5 34125900 34125963 -168959569 - Tigger5 DNA MER2_type -1 2322 2261 1355 215 69 161 chr5 34126729 34126817 -168958715 + L1ME2 LINE L1 5464 5559 -841 1867 173 0 3 chr5 34126817 34127118 -168958414 + AluJb SINE Alu 1 300 -12 1355 215 69 161 chr5 34127118 34127432 -168958100 + L1ME2 LINE L1 5559 5900 -500 746 134 47 0 chr5 34127432 34127559 -168957973 - L1MB5 LINE L1 -9 6165 6033 1355 215 69 161 chr5 34127559 34128196 -168957336 + L1ME2 LINE L1 5900 6399 -1 232 309 66 15 chr5 34128215 34128351 -168957181 - MLT1J2 LTR MaLR -241 209 67 234 0 0 0 chr5 34129213 34129239 -168956293 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1029 249 49 8 chr5 34129742 34129987 -168955545 - MIR SINE MIR -5 257 3 432 0 0 0 chr5 34130102 34130150 -168955382 + (TG)n Simple_repeat Simple_repeat 1 48 0 2522 62 0 3 chr5 34130696 34131002 -168954530 - AluY SINE Alu -6 305 1 2605 129 46 9 chr5 34131004 34131437 -168954095 - L1PA16 LINE L1 -11 6155 5707 3509 147 39 13 chr5 34131450 34131674 -168953858 + L1P4 LINE L1 4615 4832 -1334 2134 124 0 16 chr5 34131674 34131988 -168953544 - AluSx SINE Alu -3 309 1 3509 147 39 13 chr5 34131988 34132826 -168952706 + L1P4 LINE L1 4832 5701 -465 * 4541 194 28 2 chr5 34132822 34132885 -168952647 - L1M4c LINE L1 -1668 5289 5229 279 54 0 0 chr5 34132885 34132922 -168952610 + (TG)n Simple_repeat Simple_repeat 2 38 0 4541 194 28 2 chr5 34132922 34133794 -168951738 - L1M4c LINE L1 -1728 5229 4330 384 331 40 0 chr5 34133794 34133918 -168951614 + MIR SINE MIR 20 148 -114 423 241 92 63 chr5 34134090 34134290 -168951242 - MLT1L LTR MaLR -224 391 119 239 321 28 9 chr5 34134359 34134468 -168951064 + MIR SINE MIR 144 254 -8 236 316 171 8 chr5 34136908 34137025 -168948507 - L2 LINE L2 0 3272 3137 2473 58 0 3 chr5 34137206 34137501 -168948031 + AluY SINE Alu 5 298 -13 2354 92 0 0 chr5 34138299 34138593 -168946939 + AluSc SINE Alu 6 299 -10 325 243 0 0 chr5 34138760 34138830 -168946702 - Tigger5 DNA MER2_type -6 2317 2248 850 281 38 25 chr5 34138906 34139233 -168946299 - MLT1J1 LTR MaLR -114 332 1 294 301 79 122 chr5 34139885 34140343 -168945189 + L2 LINE L2 2825 3262 -10 752 259 86 56 chr5 34141113 34141522 -168944010 - MLT1J1 LTR MaLR 0 446 26 3330 214 11 6 chr5 34141584 34142234 -168943298 - MER82 DNA MER2_type 0 653 1 244 139 0 0 chr5 34142374 34142410 -168943122 + MLT1L LTR MaLR 54 89 -526 992 182 42 84 chr5 34142819 34143081 -168942451 - L1MB8 LINE L1 -9 6169 5920 289 74 19 19 chr5 34143081 34143135 -168942397 + (CTATT)n Simple_repeat Simple_repeat 2 55 0 992 182 42 84 chr5 34143135 34143180 -168942352 - L1MB8 LINE L1 -258 5920 5875 * 2321 216 36 65 chr5 34143179 34143981 -168941551 - L1M4c LINE L1 -3231 3726 2948 4313 217 68 14 chr5 34144723 34146346 -168939186 - L1M4c LINE L1 -4574 2564 663 1487 253 59 7 chr5 34146363 34146639 -168938893 - MLT1C LTR MaLR 0 467 158 2313 85 0 23 chr5 34146639 34146944 -168938588 - AluSc SINE Alu -11 298 1 1487 253 59 7 chr5 34146944 34147109 -168938423 - MLT1C LTR MaLR -309 158 3 1940 208 26 8 chr5 34147210 34147590 -168937942 - MSTD LTR MaLR -3 393 7 4313 144 27 3 chr5 34147884 34148578 -168936954 + MER50 LTR ERV1 1 711 -23 1470 216 17 36 chr5 34148856 34149217 -168936315 + MLT1A1 LTR MaLR 1 354 -11 455 286 146 12 chr5 34149229 34149400 -168936132 - MIR SINE MIR -49 213 20 1079 258 15 74 chr5 34150033 34150217 -168935315 + L1M3b LINE L1 8 166 -6115 2250 75 4 4 chr5 34150217 34150525 -168935007 + AluY SINE Alu 1 308 0 1079 258 15 74 chr5 34150525 34150676 -168934856 + L1M3b LINE L1 166 324 -5957 11146 212 41 57 chr5 34150906 34154307 -168931225 + L1M3b LINE L1 344 3799 -2551 270 120 200 0 chr5 34154307 34154357 -168931175 + 5S rRNA rRNA 32 91 -30 11146 212 41 57 chr5 34154357 34155663 -168929869 + L1M3b LINE L1 3799 5125 -1225 1989 149 0 0 chr5 34155663 34156079 -168929453 + AluSx SINE Alu 1 312 0 11146 212 41 57 chr5 34156079 34156225 -168929307 + L1M3b LINE L1 5125 5272 -1078 1980 151 73 14 chr5 34156225 34156569 -168928963 - THE1B LTR MaLR 0 364 1 11542 103 9 0 chr5 34156569 34158135 -168927397 - THE1B-int LTR MaLR 0 1580 1 1876 131 125 18 chr5 34158135 34158464 -168927068 - THE1B LTR MaLR 0 364 1 11146 212 41 57 chr5 34158464 34158670 -168926862 + L1M3b LINE L1 4842 5050 -1300 1026 16 0 16 chr5 34158670 34158790 -168926742 + L1PA2 LINE L1 6028 6148 -7 2284 81 3 10 chr5 34158911 34159206 -168926326 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr5 34160669 34160690 -168924842 + (T)n Simple_repeat Simple_repeat 1 21 0 42083 40 1 0 chr5 34160752 34166902 -168918630 - L1PA2 LINE L1 -1 6154 2 16540 185 27 9 chr5 34166904 34167166 -168918366 - L1PA15-16 LINE L1 -3049 3800 3544 2187 99 3 7 chr5 34167166 34167476 -168918056 - AluSp SINE Alu 0 309 1 16540 185 27 9 chr5 34167476 34170937 -168914595 - L1PA15-16 LINE L1 -3305 3544 5 3172 219 29 25 chr5 34170962 34171199 -168914333 - L1 LINE L1 -2994 3854 3620 2023 150 127 18 chr5 34171199 34171585 -168913947 - MSTA LTR MaLR 0 428 1 3172 219 29 25 chr5 34171585 34172024 -168913508 - L1 LINE L1 -3228 3620 3185 2664 129 31 12 chr5 34172024 34172444 -168913088 + MSTA LTR MaLR 1 428 0 8545 190 23 4 chr5 34172444 34174062 -168911470 + MSTA-int LTR MaLR 1 1649 -2 2713 129 24 7 chr5 34174066 34174485 -168911047 + MSTA LTR MaLR 3 428 0 3172 219 29 25 chr5 34174485 34174949 -168910583 - L1 LINE L1 -3665 3183 2701 6141 96 20 10 chr5 34174969 34176230 -168909302 - L1PA10 LINE L1 0 6168 4899 312 27 0 0 chr5 34176230 34176267 -168909265 + (TG)n Simple_repeat Simple_repeat 1 37 0 1254 319 66 26 chr5 34176465 34177074 -168908458 - L1 LINE L1 -6156 693 61 * 5737 211 30 43 chr5 34177069 34178022 -168907510 - L1M4 LINE L1 -1487 4659 3738 5921 153 52 28 chr5 34178022 34178275 -168907257 - Tigger3b DNA MER2_type -1798 1230 985 2009 141 0 3 chr5 34178275 34178600 -168906932 + AluSx SINE Alu 1 324 0 5921 153 52 28 chr5 34178600 34179545 -168905987 - Tigger3b DNA MER2_type -2043 985 1 5737 211 30 43 chr5 34179545 34180398 -168905134 - L1M4 LINE L1 -2408 3738 2876 2609 238 30 7 chr5 34180583 34181374 -168904158 - L1MCa LINE L1 -3050 3376 2553 527 118 11 0 chr5 34181374 34181467 -168904065 + L1PB1 LINE L1 6058 6151 0 2609 238 30 7 chr5 34181467 34181737 -168903795 - L1MCa LINE L1 -3873 2553 2291 * 7378 179 54 29 chr5 34181730 34183475 -168902057 - L1MCa LINE L1 -4498 1950 28 195 330 117 56 chr5 34183678 34183875 -168901657 - L2 LINE L2 -1155 2159 1951 760 256 43 0 chr5 34183882 34184116 -168901416 + L1MC4 LINE L1 6858 7101 -941 1950 226 27 59 chr5 34184117 34184692 -168900840 + MLT2B1 LTR ERVL 1 516 -4 233 159 23 0 chr5 34184697 34184741 -168900791 + L1MC4 LINE L1 7099 7143 -899 1679 264 54 15 chr5 34184813 34185426 -168900106 + L1MC4 LINE L1 7214 7850 -192 300 240 110 0 chr5 34185433 34185533 -168899999 + L1MC4 LINE L1 7930 8040 -2 1125 120 25 0 chr5 34187469 34187627 -168897905 + FRAM SINE Alu 1 161 -15 40116 39 25 3 chr5 34187629 34193466 -168892066 + L1PA4 LINE L1 1 5965 -190 5838 32 7 1 chr5 34193569 34194318 -168891214 + L1PA3 LINE L1 5292 6044 -111 1254 318 47 26 chr5 34194490 34194984 -168890548 - L2 LINE L2 0 3313 2810 3292 68 2 5 chr5 34195654 34196093 -168889439 + L1PA8 LINE L1 5727 6164 -8 26 0 0 0 chr5 34198131 34198157 -168887375 + AT_rich Low_complexity Low_complexity 1 26 0 1931 150 46 22 chr5 34198372 34198738 -168886794 - THE1C LTR MaLR 0 375 1 29 94 0 0 chr5 34199968 34200053 -168885479 + AT_rich Low_complexity Low_complexity 1 85 0 822 237 6 6 chr5 34200230 34200407 -168885125 - MER5B DNA MER1_type -1 177 1 1839 156 3 46 chr5 34200434 34200760 -168884772 - AluJb SINE Alu 0 312 1 2251 119 3 0 chr5 34200825 34201120 -168884412 + AluSx SINE Alu 1 296 -16 193 156 16 31 chr5 34203025 34203089 -168882443 + T-rich Low_complexity Low_complexity 3 65 0 399 98 0 0 chr5 34203297 34203358 -168882174 + (CA)n Simple_repeat Simple_repeat 1 61 0 195 301 88 37 chr5 34204351 34204487 -168881045 - L2 LINE L2 -3 3310 3168 2087 99 11 0 chr5 34204522 34204794 -168880738 + AluSx SINE Alu 34 308 -4 624 322 75 63 chr5 34205141 34206059 -168879473 - L2 LINE L2 -675 2639 1711 1831 88 18 29 chr5 34206085 34206357 -168879175 + AluSq SINE Alu 36 304 -9 213 351 113 33 chr5 34206541 34206877 -168878655 - L2 LINE L2 -1905 1409 1047 899 251 71 0 chr5 34207031 34207326 -168878206 + L1MC4a LINE L1 5613 5928 -1880 185 103 77 0 chr5 34207332 34207371 -168878161 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 36 62 0 0 chr5 34207473 34207537 -168877995 + AT_rich Low_complexity Low_complexity 1 64 0 247 274 95 12 chr5 34209018 34209102 -168876430 + L2 LINE L2 3138 3228 -44 334 278 56 0 chr5 34209113 34209221 -168876311 + MIR SINE MIR 106 219 -43 336 357 32 54 chr5 34209646 34209831 -168875701 + L2 LINE L2 3092 3272 0 1167 232 46 32 chr5 34209835 34210119 -168875413 - AluJb SINE Alu -13 289 2 312 297 46 95 chr5 34210186 34210533 -168874999 + L2 LINE L2 2154 2483 -831 311 304 143 7 chr5 34210548 34210725 -168874807 + MIR SINE MIR 4 201 -61 327 306 75 52 chr5 34211470 34211604 -168873928 - L2 LINE L2 0 3272 3136 227 273 83 8 chr5 34211889 34211906 -168873626 - L1MA10 LINE L1 0 6334 6318 2815 219 136 31 chr5 34211906 34213083 -168872449 - L1ME2 LINE L1 -8 6156 4873 1873 166 33 6 chr5 34213146 34213483 -168872049 + MER46B DNA MER2_type 7 227 -9 2272 127 31 3 chr5 34213647 34214001 -168871531 + THE1B LTR MaLR 1 364 0 366 357 41 15 chr5 34214414 34214610 -168870922 - L1MEc LINE L1 -6031 365 165 279 348 64 0 chr5 34214684 34214825 -168870707 - L2 LINE L2 -559 2755 2606 675 241 89 59 chr5 34214840 34215076 -168870456 - MIR SINE MIR -5 257 15 2020 117 0 0 chr5 34215392 34215658 -168869874 + AluSx SINE Alu 17 282 -30 191 343 152 9 chr5 34216557 34216662 -168868870 + MIR SINE MIR 25 144 -118 1269 229 81 45 chr5 34216673 34217118 -168868414 + MLT1C LTR MaLR 7 467 0 261 0 0 0 chr5 34219036 34219065 -168866467 + (CA)n Simple_repeat Simple_repeat 2 30 0 2243 113 0 3 chr5 34219453 34219754 -168865778 - AluSq SINE Alu -13 300 1 9711 37 4 0 chr5 34219818 34221565 -168863967 + L1PA4 LINE L1 4202 5955 -200 6064 231 81 50 chr5 34222017 34223208 -168862324 + L1MC4a LINE L1 5192 6344 -1464 2260 132 28 6 chr5 34223208 34223564 -168861968 - THE1B LTR MaLR 0 364 1 6064 231 81 50 chr5 34223564 34224714 -168860818 + L1MC4a LINE L1 6344 7602 -206 207 276 81 35 chr5 34224928 34225015 -168860517 + L2 LINE L2 2528 2618 -696 2175 98 0 13 chr5 34275240 34275546 -168809986 - AluSg SINE Alu -8 302 1 2126 107 3 22 chr5 34275566 34275884 -168809648 - AluSx SINE Alu 0 312 1 351 168 0 134 chr5 34275947 34276066 -168809466 - AluSg/x SINE Alu 0 302 200 2058 105 11 7 chr5 34276161 34276447 -168809085 - AluSx SINE Alu -15 297 11 2551 156 3 12 chr5 34276455 34277094 -168808438 - MER72 LTR ERV1 -39 683 1 756 286 40 48 chr5 34277766 34278047 -168807485 + L1MC4a LINE L1 5422 5640 -481 2426 67 7 0 chr5 34278047 34278346 -168807186 - AluY SINE Alu -10 301 1 756 286 40 48 chr5 34278346 34278525 -168807007 + L1MC4a LINE L1 5640 5819 -302 189 294 59 0 chr5 34278827 34278878 -168806654 - MER5B DNA MER1_type 0 178 125 457 366 103 20 chr5 34279677 34280084 -168805448 - L1MC/D LINE L1 -2011 5797 5357 2142 94 3 11 chr5 34280087 34280374 -168805158 - AluSp SINE Alu -28 285 1 234 315 56 49 chr5 34280859 34281021 -168804511 + MER5A DNA MER1_type 21 183 -6 553 251 133 9 chr5 34281095 34281306 -168804226 - L2 LINE L2 -15 3298 3062 30 0 0 0 chr5 34282182 34282212 -168803320 + AT_rich Low_complexity Low_complexity 1 30 0 7547 80 17 0 chr5 34282215 34284035 -168801497 - L1PA7 LINE L1 -7 6147 4309 549 168 42 35 chr5 34284153 34284296 -168801236 - L1MC/D LINE L1 -805 5341 5198 261 146 0 0 chr5 34284305 34284353 -168801179 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 473 305 76 23 chr5 34285399 34285796 -168799736 + L1MC4 LINE L1 7602 8019 -23 1098 201 29 112 chr5 34287921 34288369 -168797163 + L1ME1 LINE L1 5751 6161 -5 294 226 22 58 chr5 34288380 34288517 -168797015 + L1M4 LINE L1 5199 5330 -816 386 312 80 34 chr5 34288532 34288795 -168796737 + L1MEc LINE L1 1906 2180 -4216 21 57 0 0 chr5 34288819 34288854 -168796678 + AT_rich Low_complexity Low_complexity 1 35 0 266 351 71 0 chr5 34288933 34289241 -168796291 + L1MEc LINE L1 1455 1784 -4612 288 0 0 0 chr5 34289254 34289286 -168796246 + (TG)n Simple_repeat Simple_repeat 2 33 0 372 237 15 67 chr5 34289336 34289471 -168796061 - LTR16A LTR ERVL -2 448 321 1652 233 70 38 chr5 34289798 34290148 -168795384 - MLT1E LTR MaLR -2 591 210 2303 175 26 7 chr5 34290148 34290566 -168794966 - MSTB LTR MaLR 0 426 1 1652 233 70 38 chr5 34290566 34290783 -168794749 - MLT1E LTR MaLR -383 210 1 23 54 0 0 chr5 34291106 34291143 -168794389 + AT_rich Low_complexity Low_complexity 1 37 0 273 286 11 11 chr5 34292108 34292199 -168793333 + MER96 DNA MER1_type? 85 175 0 255 114 0 0 chr5 34292344 34292388 -168793144 + (TA)n Simple_repeat Simple_repeat 2 45 0 205 288 14 0 chr5 34292401 34292474 -168793058 + (TA)n Simple_repeat Simple_repeat 1 74 0 2865 79 50 17 chr5 34292769 34293189 -168792343 - L1PA11 LINE L1 0 6174 5741 6040 95 18 6 chr5 34293301 34294407 -168791125 - L1PA11 LINE L1 -632 5542 4429 820 103 0 0 chr5 34294407 34294514 -168791018 - U6 snRNA snRNA 0 107 1 836 285 33 12 chr5 34294565 34294807 -168790725 - MIR SINE MIR -8 254 8 506 271 50 11 chr5 34294812 34294993 -168790539 - L1ME LINE L1 -330 5791 5604 502 298 12 6 chr5 34298938 34299106 -168786426 + LTR33 LTR ERVL 10 178 -343 290 236 79 14 chr5 34300058 34300198 -168785334 - MER113 DNA MER1_type? -372 149 1 1510 173 151 34 chr5 34300208 34300624 -168784908 + MLT1C LTR MaLR 1 465 -2 2242 90 0 3 chr5 34300640 34300928 -168784604 + AluY SINE Alu 13 299 -12 241 350 60 10 chr5 34301135 34301235 -168784297 + MIR SINE MIR 16 120 -88 204 133 50 0 chr5 34301941 34302001 -168783531 + (CAAAT)n Simple_repeat Simple_repeat 1 63 0 258 341 0 12 chr5 34302271 34302353 -168783179 - L2 LINE L2 -44 3228 3148 317 344 91 13 chr5 34302368 34302598 -168782934 - MIR SINE MIR -8 254 7 252 293 112 17 chr5 34303682 34303798 -168781734 - MIR SINE MIR -62 146 20 401 319 22 21 chr5 34304189 34304339 -168781193 + MIR SINE MIR 5 154 -69 333 281 29 29 chr5 34304710 34304881 -168780651 - L1ME LINE L1 -316 5805 5635 4278 21 0 0 chr5 34305387 34305909 -168779623 - L1P LINE L1 -1428 4718 4197 2409 141 73 2 chr5 34306009 34306449 -168779083 + MER31A LTR ERV1 15 485 0 216 362 0 64 chr5 34306449 34306543 -168778989 + MIR SINE MIR 45 132 -76 284 192 0 0 chr5 34306896 34306948 -168778584 + MER66B LTR ERV1 295 346 -140 237 319 50 39 chr5 34307222 34307404 -168778128 + Charlie2 DNA MER1_type 27 210 -2652 1416 130 40 0 chr5 34307404 34307657 -168777875 + L1MA5 LINE L1 5863 6125 -175 16491 56 4 11 chr5 34307667 34310618 -168774914 - L1PA6 LINE L1 -6 6148 3229 7644 27 1 0 chr5 34310613 34312044 -168773488 + L1PA4 LINE L1 4723 6155 0 * 741 294 70 36 chr5 34312930 34313314 -168772218 + LTR16A LTR ERVL 27 423 -27 186 43 0 0 chr5 34313335 34313358 -168772174 + (CAA)n Simple_repeat Simple_repeat 2 24 0 190 226 94 0 chr5 34314454 34314507 -168771025 - L3 LINE CR1 -1261 316 259 842 310 14 5 chr5 34314727 34314943 -168770589 - MIR SINE MIR -13 249 32 1874 146 56 21 chr5 34316725 34317102 -168768430 - MLT1B LTR MaLR 0 390 1 416 271 28 0 chr5 34317987 34318094 -168767438 + MIR SINE MIR 149 258 -4 422 221 62 72 chr5 34318120 34318315 -168767217 + MLT1L LTR MaLR 418 610 -5 1689 165 4 18 chr5 34318514 34318786 -168766746 + AluJb SINE Alu 15 282 -30 482 326 46 5 chr5 34318832 34319028 -168766504 + MIR SINE MIR 1 204 -58 2692 126 16 23 chr5 34319755 34320198 -168765334 + L1PA15 LINE L1 5717 6156 -9 212 371 95 0 chr5 34320404 34320509 -168765023 - L2 LINE L2 -11 3261 3147 21 57 0 0 chr5 34320509 34320544 -168764988 + AT_rich Low_complexity Low_complexity 1 35 0 738 164 0 0 chr5 34320733 34320849 -168764683 + FLAM_C SINE Alu 1 116 -27 372 263 26 0 chr5 34321279 34321393 -168764139 - MIR3 SINE MIR -7 201 85 428 270 18 84 chr5 34322276 34322502 -168763030 + LTR33A LTR ERVL 308 518 -5 2121 103 7 14 chr5 34322530 34322820 -168762712 + AluSx SINE Alu 18 305 -7 787 241 32 44 chr5 34325912 34326161 -168759371 - MER102a DNA MER1_type -1 329 84 7054 106 35 15 chr5 34326565 34327472 -168758060 - Tigger1 DNA MER2_type -5 2413 1477 2193 136 0 0 chr5 34327472 34327774 -168757758 - AluSg SINE Alu -8 302 1 7054 106 35 15 chr5 34327774 34328008 -168757524 - Tigger1 DNA MER2_type -941 1477 1249 737 224 0 0 chr5 34328009 34328143 -168757389 + FLAM_A SINE Alu 1 134 -8 2005 115 3 21 chr5 34328143 34328473 -168757059 - Tigger1 DNA MER2_type -1160 1258 935 2176 137 41 77 chr5 34328502 34328970 -168756562 - Tigger1 DNA MER2_type -1967 451 1 1806 161 3 18 chr5 34329839 34330148 -168755384 + AluJb SINE Alu 1 305 0 502 272 98 31 chr5 34330853 34331068 -168754464 - MIR SINE MIR -13 249 28 1830 161 15 66 chr5 34331251 34331661 -168753871 - MLT1B LTR MaLR -1 389 1 1867 183 25 6 chr5 34331870 34332225 -168753307 + MLT1A1 LTR MaLR 4 365 0 930 264 21 12 chr5 34332486 34332728 -168752804 + MIR SINE MIR 2 245 -17 833 338 70 34 chr5 34332835 34333391 -168752141 - MLT1K LTR MaLR -12 576 1 253 313 65 25 chr5 34335445 34335646 -168749886 - MLT1K LTR MaLR -13 575 367 723 176 38 124 chr5 34336103 34336154 -168749378 - MIR SINE MIR -30 232 178 2045 156 0 0 chr5 34336154 34336455 -168749077 - AluSx SINE Alu -11 301 1 723 176 38 124 chr5 34336455 34336503 -168749029 - MIR SINE MIR -84 178 127 2164 119 0 3 chr5 34336503 34336798 -168748734 + AluSg SINE Alu 1 294 -16 723 176 38 124 chr5 34336798 34336907 -168748625 - MIR SINE MIR -135 127 41 309 51 0 0 chr5 34337233 34337272 -168748260 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1106 87 29 52 chr5 34337375 34337547 -168747985 - L1PA11 LINE L1 -6 6168 6001 1306 229 59 31 chr5 34337755 34338144 -168747388 + MLT1C LTR MaLR 63 462 -5 433 247 183 8 chr5 34338163 34338414 -168747118 + LTR50 LTR ERVL 18 312 -483 252 299 36 98 chr5 34338655 34338722 -168746810 + MIR SINE MIR 67 137 -125 1524 151 110 11 chr5 34338722 34338994 -168746538 - AluJo SINE Alu -9 303 5 252 299 36 98 chr5 34338994 34339120 -168746412 + MIR SINE MIR 137 248 -14 207 139 28 0 chr5 34340389 34340425 -168745107 + L2 LINE L2 2765 2801 -513 204 370 43 0 chr5 34340931 34341023 -168744509 + MIR SINE MIR 46 141 -121 396 289 31 25 chr5 34341898 34342057 -168743475 - L1ME LINE L1 -447 5723 5564 1919 192 70 36 chr5 34342059 34342434 -168743098 - MSTB2 LTR MaLR 0 457 96 2184 89 98 9 chr5 34342434 34342760 -168742772 + THE1A LTR MaLR 1 355 0 12000 91 1 6 chr5 34342760 34344347 -168741185 + THE1A-int LTR MaLR 1 1580 0 2717 82 6 0 chr5 34344347 34344700 -168740832 + THE1A LTR MaLR 1 355 0 1919 192 70 36 chr5 34344700 34344764 -168740768 - MSTB2 LTR MaLR -360 97 1 316 242 110 0 chr5 34344764 34344855 -168740677 - L1ME LINE L1 -604 5566 5466 22 80 0 0 chr5 34344917 34344967 -168740565 + AT_rich Low_complexity Low_complexity 1 50 0 1636 171 87 106 chr5 34345098 34345551 -168739981 + MLT2B1 LTR ERVL 1 444 -76 204 97 0 0 chr5 34345551 34345582 -168739950 + (CA)n Simple_repeat Simple_repeat 2 32 0 1636 171 87 106 chr5 34345582 34345656 -168739876 + MLT2B1 LTR ERVL 444 518 -2 872 125 0 0 chr5 34345799 34345935 -168739597 - L1PA15 LINE L1 -6 6159 6024 567 308 11 11 chr5 34346043 34346225 -168739307 + MIR SINE MIR 48 229 -33 35 71 0 0 chr5 34347337 34347407 -168738125 + AT_rich Low_complexity Low_complexity 1 70 0 4343 135 59 12 chr5 34347565 34348315 -168737217 - LTR1 LTR ERV1 0 785 1 629 245 86 0 chr5 34348522 34348673 -168736859 - FRAM SINE Alu -2 164 1 316 307 6 39 chr5 34348674 34348853 -168736679 - L1ME3A LINE L1 -299 5871 5699 483 265 48 0 chr5 34348951 34349117 -168736415 - MER63C DNA MER1_type -2 928 755 292 80 20 0 chr5 34349225 34349275 -168736257 - MER63C DNA MER1_type -420 510 460 2074 109 0 7 chr5 34349275 34349597 -168735935 + AluSx SINE Alu 1 320 0 436 195 195 0 chr5 34349597 34349684 -168735848 + AluSc SINE Alu 133 236 -73 1017 198 9 18 chr5 34349722 34349944 -168735588 - MER63C DNA MER1_type -458 472 253 741 223 6 0 chr5 34350256 34350413 -168735119 + MIR SINE MIR 104 261 -1 211 246 85 51 chr5 34350339 34350457 -168735075 - MIR SINE MIR 0 262 141 * 678 82 0 0 chr5 34350794 34350891 -168734641 + L1P LINE L1 4127 4223 -1923 270 30 0 0 chr5 34350902 34350935 -168734597 + L1P LINE L1 4211 4243 -1903 2342 93 3 3 chr5 34351049 34351359 -168734173 + AluSg SINE Alu 1 310 0 412 343 23 12 chr5 34351722 34351894 -168733638 + MIR SINE MIR 12 185 -77 21 36 0 0 chr5 34352120 34352148 -168733384 + AT_rich Low_complexity Low_complexity 1 28 0 302 266 117 11 chr5 34353467 34353561 -168731971 - L2 LINE L2 -50 3263 3160 2127 119 33 3 chr5 34353573 34353875 -168731657 + AluSx SINE Alu 1 311 -1 685 347 89 55 chr5 34354031 34354746 -168730786 - L2 LINE L2 -420 2894 2155 1051 193 152 12 chr5 34355562 34355806 -168729726 + AluJo SINE Alu 4 281 -31 183 80 0 0 chr5 34355811 34355836 -168729696 + (TAA)n Simple_repeat Simple_repeat 2 26 0 531 276 79 35 chr5 34356255 34356483 -168729049 - L2 LINE L2 -2 3311 3074 * 3718 245 209 5 chr5 34356458 34357845 -168727687 - L2 LINE L2 -350 2964 1321 370 314 79 63 chr5 34358134 34358449 -168727083 - L2 LINE L2 -5 3308 2989 1433 47 0 0 chr5 34358532 34358703 -168726829 - AluYb8 SINE Alu -12 306 136 474 241 91 37 chr5 34358703 34358890 -168726642 - MIR SINE MIR -53 209 13 617 262 57 61 chr5 34358911 34359140 -168726392 + MIR SINE MIR 3 230 -32 762 210 99 12 chr5 34359149 34359392 -168726140 - MER33 DNA MER1_type 0 324 61 183 42 0 0 chr5 34360073 34360097 -168725435 + (T)n Simple_repeat Simple_repeat 1 24 0 266 236 313 14 chr5 34360233 34360377 -168725155 - MIR SINE MIR -56 206 20 999 282 129 59 chr5 34360514 34361004 -168724528 + L2 LINE L2 1563 2086 -1228 209 274 170 9 chr5 34361588 34361694 -168723838 - L2 LINE L2 -225 3047 2925 185 283 133 0 chr5 34362071 34362131 -168723401 + L3 LINE CR1 1380 1447 -130 201 278 0 0 chr5 34362252 34362306 -168723226 - L2 LINE L2 -92 3221 3168 321 287 32 0 chr5 34363063 34363157 -168722375 + MLT1K LTR MaLR 175 271 -317 1161 162 117 104 chr5 34363180 34363578 -168721954 + MLT1A2 LTR MaLR 1 374 0 259 236 45 22 chr5 34363652 34363741 -168721791 + MLT1K LTR MaLR 411 501 -87 2221 130 0 0 chr5 34363803 34364110 -168721422 - AluSx SINE Alu -5 307 1 592 311 135 27 chr5 34364953 34365249 -168720283 - L2 LINE L2 -1228 2086 1759 499 293 24 37 chr5 34365606 34365770 -168719762 + MIR SINE MIR 5 166 -96 345 326 154 39 chr5 34365845 34366078 -168719454 + L2 LINE L2 3012 3271 -1 616 289 6 0 chr5 34367855 34368028 -168717504 + MER5B DNA MER1_type 1 174 -4 304 262 215 20 chr5 34368091 34368240 -168717292 - MER5B DNA MER1_type 0 178 1 720 151 87 0 chr5 34368412 34368584 -168716948 - MER53 DNA DNA 0 189 3 438 20 0 0 chr5 34370317 34370368 -168715164 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 286 50 50 chr5 34370983 34371074 -168714458 - MIR3 SINE MIR -10 198 105 2182 131 3 0 chr5 34371074 34371380 -168714152 - AluSx SINE Alu -5 307 1 425 286 50 50 chr5 34371380 34371428 -168714104 - MIR3 SINE MIR -102 106 59 209 196 18 0 chr5 34372558 34372614 -168712918 + CT-rich Low_complexity Low_complexity 2 58 0 279 54 0 0 chr5 34373023 34373060 -168712472 + (CA)n Simple_repeat Simple_repeat 1 37 0 502 280 140 10 chr5 34374010 34374217 -168711315 + MIR SINE MIR 29 262 0 553 248 25 10 chr5 34374347 34374549 -168710983 - L1MC5 LINE L1 -37 7924 7720 592 235 75 5 chr5 34374551 34374738 -168710794 + MLT1H LTR MaLR 1 200 -349 228 327 159 9 chr5 34374751 34374864 -168710668 + MLT1H LTR MaLR 420 549 0 330 26 0 0 chr5 34375216 34375255 -168710277 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr5 34375291 34375334 -168710198 + (GA)n Simple_repeat Simple_repeat 1 43 0 1679 135 19 61 chr5 34375396 34375708 -168709824 + AluJo SINE Alu 3 301 -11 486 145 14 29 chr5 34375714 34375852 -168709680 + GA-rich Low_complexity Low_complexity 1 136 0 2018 139 0 10 chr5 34376587 34376920 -168708612 - AluJb SINE Alu 0 312 1 666 214 19 0 chr5 34377142 34377296 -168708236 - MER103 DNA DNA -2 164 8 435 326 7 17 chr5 34377373 34377532 -168708000 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 34377864 34377885 -168707647 + AT_rich Low_complexity Low_complexity 1 21 0 508 319 122 40 chr5 34377991 34378492 -168707040 + MLT1L LTR MaLR 1 542 -73 549 368 95 6 chr5 34379615 34379930 -168705602 + L3 LINE CR1 1046 1388 -189 1622 199 21 18 chr5 34379964 34380300 -168705232 + MER1B DNA MER1_type 1 337 0 267 293 195 35 chr5 34380309 34380483 -168705049 + L3 LINE CR1 1361 1562 -15 313 194 0 42 chr5 34380626 34380698 -168704834 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 34381060 34381091 -168704441 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 34381113 34381828 -168703704 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 34381828 34381880 -168703652 + CT-rich Low_complexity Low_complexity 2 53 0 1299 142 82 113 chr5 34382162 34382542 -168702990 + L1MA4A LINE L1 5932 6299 -4 209 253 211 11 chr5 34382752 34382847 -168702685 - MIR SINE MIR -120 142 29 329 288 50 43 chr5 34382861 34383000 -168702532 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 34384194 34384223 -168701309 + AT_rich Low_complexity Low_complexity 1 29 0 868 41 0 72 chr5 34384289 34384483 -168701049 + (TA)n Simple_repeat Simple_repeat 1 180 0 317 239 68 0 chr5 34385584 34385672 -168699860 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 34387115 34387158 -168698374 + (TG)n Simple_repeat Simple_repeat 2 44 0 285 183 0 0 chr5 34387158 34387218 -168698314 + (TA)n Simple_repeat Simple_repeat 2 61 0 205 293 40 40 chr5 34389531 34389606 -168695926 + L3b LINE CR1 1393 1467 -116 2357 98 10 0 chr5 34390472 34390769 -168694763 - AluSx SINE Alu -12 300 1 1236 155 10 0 chr5 34390906 34391113 -168694419 + MER2 DNA MER2_type 2 210 -135 514 254 65 0 chr5 34393396 34393534 -168691998 - MIR SINE MIR -13 249 103 198 385 55 0 chr5 34393651 34393742 -168691790 - MIR SINE MIR -165 97 2 868 235 126 82 chr5 34394721 34395390 -168690142 + HAL1 LINE L1 8 705 -1802 281 232 50 61 chr5 34395533 34395632 -168689900 + MIR SINE MIR 92 189 -73 316 339 42 0 chr5 34395635 34395753 -168689779 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 34396266 34396299 -168689233 + AT_rich Low_complexity Low_complexity 1 33 0 15755 75 8 1 chr5 34396301 34398755 -168686777 - L1PA7 LINE L1 -5 6149 3673 261 0 0 0 chr5 34398755 34398784 -168686748 + (TG)n Simple_repeat Simple_repeat 2 30 0 15755 75 8 1 chr5 34398784 34399220 -168686312 - L1PA7 LINE L1 -2481 3673 3242 189 242 0 0 chr5 34400028 34400061 -168685471 - L2 LINE L2 -21 3251 3219 745 166 0 43 chr5 34400287 34400426 -168685106 - FLAM_C SINE Alu 0 133 1 2285 97 3 3 chr5 34400584 34400895 -168684637 - AluSq SINE Alu -2 311 1 1386 199 3 43 chr5 34400896 34400955 -168684577 - AluJo SINE Alu -11 301 241 1692 186 24 12 chr5 34400955 34401294 -168684238 + MER61A LTR ERV1 1 343 0 1386 199 3 43 chr5 34401294 34401535 -168683997 - AluJo SINE Alu -71 241 13 2328 122 0 0 chr5 34402154 34402465 -168683067 - AluSq SINE Alu -2 311 1 257 349 0 0 chr5 34403165 34403228 -168682304 - L2 LINE L2 -24 3289 3227 27 29 0 0 chr5 34403432 34403466 -168682066 + AT_rich Low_complexity Low_complexity 1 34 0 420 232 66 31 chr5 34403814 34403997 -168681535 - L1ME2 LINE L1 -1 6163 5971 477 307 121 54 chr5 34404190 34404976 -168680556 - L2 LINE L2 -198 3074 2238 317 234 0 0 chr5 34404976 34405040 -168680492 + L1MC4 LINE L1 6640 6703 -1339 205 285 60 45 chr5 34405128 34405224 -168680308 - MER5B DNA MER1_type -78 100 7 1918 135 35 35 chr5 34405379 34405690 -168679842 - AluSx SINE Alu 0 312 2 229 175 53 0 chr5 34406123 34406180 -168679352 - LTR66 LTR ERVL -153 457 398 302 116 53 21 chr5 34406180 34406275 -168679257 + (TA)n Simple_repeat Simple_repeat 2 99 0 190 250 30 15 chr5 34406548 34406680 -168678852 + GA-rich Low_complexity Low_complexity 2 135 0 212 364 0 0 chr5 34407122 34407188 -168678344 - MIR3 SINE MIR -36 172 107 1341 118 55 9 chr5 34407212 34407432 -168678100 + MER30 DNA MER1_type 1 230 0 193 40 0 0 chr5 34407741 34407766 -168677766 + (TTTG)n Simple_repeat Simple_repeat 2 104 0 2198 82 0 7 chr5 34407766 34408048 -168677484 - AluSc SINE Alu -29 280 1 189 397 43 26 chr5 34408094 34408210 -168677322 - L2 LINE L2 -17 3255 3138 215 309 55 88 chr5 34408385 34408602 -168676930 + MIR SINE MIR 46 255 -7 * 933 213 62 62 chr5 34408560 34408800 -168676732 - MIR SINE MIR 0 262 23 21 57 0 0 chr5 34409057 34409092 -168676440 + AT_rich Low_complexity Low_complexity 1 35 0 320 197 142 126 chr5 34409661 34409844 -168675688 - L1MC4 LINE L1 0 8042 7857 1009 272 39 27 chr5 34409880 34410218 -168675314 + LTR16A LTR ERVL 31 372 -78 26 64 0 0 chr5 34410268 34410315 -168675217 + AT_rich Low_complexity Low_complexity 1 47 0 963 220 75 20 chr5 34410315 34410512 -168675020 - L1MC4 LINE L1 -249 7793 7573 216 0 0 0 chr5 34410512 34410536 -168674996 + (CTTTG)n Simple_repeat Simple_repeat 2 25 0 963 220 75 20 chr5 34410536 34410633 -168674899 - L1MC4 LINE L1 -469 7573 7483 230 301 0 14 chr5 34411009 34411082 -168674450 - HsTC2 DNA Tc2 -1816 82 11 636 299 16 16 chr5 34411085 34411269 -168674263 - MIR SINE MIR -31 231 48 2019 124 26 100 chr5 34412054 34412474 -168673058 + MLT1B LTR MaLR 1 389 -1 795 250 88 37 chr5 34413469 34413741 -168671791 + L2 LINE L2 3028 3313 0 475 261 33 56 chr5 34413739 34413919 -168671613 - L2 LINE L2 -4 3309 3134 * 25 0 0 0 chr5 34415306 34415331 -168670201 + AT_rich Low_complexity Low_complexity 1 25 0 354 326 29 22 chr5 34416499 34416637 -168668895 - L2 LINE L2 0 3313 3175 1080 116 9 111 chr5 34416664 34416693 -168668839 - THE1B LTR MaLR 0 364 334 7178 35 1 33 chr5 34416693 34417845 -168667687 + L1PA4 LINE L1 5031 6152 -3 1080 116 9 111 chr5 34417845 34418031 -168667501 - THE1B LTR MaLR -30 334 171 225 0 0 0 chr5 34418127 34418152 -168667380 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 959 332 62 28 chr5 34418223 34418825 -168666707 - L2 LINE L2 -516 2798 2177 743 313 60 17 chr5 34418911 34419626 -168665906 + L1MEc LINE L1 1075 1820 -4576 788 167 0 0 chr5 34419836 34419962 -168665570 - FLAM_C SINE Alu -3 130 5 766 256 76 16 chr5 34420135 34420582 -168664950 + L1MEc LINE L1 2178 2612 -3603 546 143 9 38 chr5 34420606 34420711 -168664821 + MSTC LTR MaLR 1 102 -326 713 301 152 17 chr5 34420724 34421126 -168664406 + LTR33 LTR ERVL 14 469 -52 284 308 0 0 chr5 34421178 34421285 -168664247 + L1MEc LINE L1 3282 3388 -2827 329 285 40 46 chr5 34421289 34421440 -168664092 + L1MEc LINE L1 3801 3950 -2265 746 125 8 8 chr5 34421582 34421702 -168663830 - AluSg/x SINE Alu -1 309 190 1450 96 0 11 chr5 34421702 34421890 -168663642 + AluSx SINE Alu 22 207 -105 921 114 0 0 chr5 34423368 34423500 -168662032 + AluSc SINE Alu 170 301 -8 214 235 49 62 chr5 34423970 34424051 -168661481 - L2 LINE L2 0 3313 3234 371 328 76 0 chr5 34424158 34424289 -168661243 + MIR3 SINE MIR 5 145 -63 263 300 127 64 chr5 34424442 34424662 -168660870 + L2 LINE L2 2953 3186 -86 25 75 0 0 chr5 34426494 34426547 -168658985 + AT_rich Low_complexity Low_complexity 1 53 0 481 171 38 9 chr5 34426548 34426653 -168658879 + L1MD3 LINE L1 7873 7980 -15 2126 83 7 4 chr5 34427048 34427324 -168658208 + AluSq SINE Alu 21 297 -16 604 73 85 0 chr5 34427435 34427599 -168657933 + (TA)n Simple_repeat Simple_repeat 1 178 0 315 243 81 62 chr5 34427815 34428025 -168657507 - LTR33 LTR ERVL -6 515 302 257 270 40 61 chr5 34428107 34428255 -168657277 - LTR33 LTR ERVL -376 145 1 6929 137 45 6 chr5 34428506 34429691 -168655841 - Tigger3b DNA MER2_type 0 1231 1 383 350 49 16 chr5 34432067 34432250 -168653282 + MIR SINE MIR 19 207 -55 613 108 0 43 chr5 34432276 34432369 -168653163 - 5S rRNA rRNA -32 89 1 1436 33 22 0 chr5 34432889 34433071 -168652461 - L1P LINE L1 -3171 2975 2790 9720 27 5 0 chr5 34433071 34434991 -168650541 + L1PA3 LINE L1 4233 6155 0 32 26 0 0 chr5 34435357 34435396 -168650136 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 34436843 34436864 -168648668 + AT_rich Low_complexity Low_complexity 1 21 0 710 274 111 0 chr5 34436986 34437194 -168648338 + Charlie2 DNA MER1_type 92 322 -2460 2387 206 70 65 chr5 34437199 34438088 -168647444 + Charlie2 DNA MER1_type 1856 2752 -110 2131 124 0 0 chr5 34438088 34438394 -168647138 - AluSc SINE Alu -1 308 3 2387 206 70 65 chr5 34438394 34438497 -168647035 + Charlie2 DNA MER1_type 2752 2853 -9 275 234 87 85 chr5 34438798 34438993 -168646539 + MIR SINE MIR 2 191 -67 368 238 0 48 chr5 34439619 34439724 -168645808 - L2 LINE L2 -69 3244 3145 591 318 76 38 chr5 34439767 34439886 -168645646 - L2 LINE L2 -338 2976 2863 1388 190 129 41 chr5 34439886 34440117 -168645415 + MSTD LTR MaLR 1 277 -119 2246 101 0 0 chr5 34440117 34440405 -168645127 + AluSg SINE Alu 9 296 -14 1388 190 129 41 chr5 34440405 34440537 -168644995 + MSTD LTR MaLR 277 396 0 591 318 76 38 chr5 34440537 34440706 -168644826 - L2 LINE L2 -451 2863 2677 206 192 19 0 chr5 34442685 34442737 -168642795 + (TA)n Simple_repeat Simple_repeat 1 53 0 399 282 196 55 chr5 34442738 34443142 -168642390 - L1MC4a LINE L1 -1372 6436 5976 1031 172 104 5 chr5 34443161 34443382 -168642150 - L1MD3 LINE L1 -23 7972 7730 567 258 20 24 chr5 34443386 34443634 -168641898 - L1MC4a LINE L1 -1830 5978 5732 1977 198 33 0 chr5 34443849 34444268 -168641264 - Charlie4a DNA MER1_type -75 433 1 231 36 0 0 chr5 34444381 34444409 -168641123 + (TC)n Simple_repeat Simple_repeat 1 28 0 272 168 84 11 chr5 34444409 34444504 -168641028 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 254 284 27 2 chr5 34444547 34444622 -168640910 - MIR SINE MIR -95 113 34 1041 238 110 74 chr5 34445914 34446440 -168639092 + MLT1H LTR MaLR 1 545 -4 8955 212 64 33 chr5 34447341 34449666 -168635866 + L1MDa LINE L1 1 2397 -4143 1985 188 65 7 chr5 34449644 34449785 -168635747 + L1MD1 LINE L1 6174 6305 -331 * 279 0 0 0 chr5 34449785 34449816 -168635716 + (TG)n Simple_repeat Simple_repeat 2 32 0 1985 188 65 7 chr5 34449816 34450088 -168635444 + L1MD1 LINE L1 6305 6611 -25 32 26 0 0 chr5 34450088 34450127 -168635405 + AT_rich Low_complexity Low_complexity 1 39 0 206 259 0 37 chr5 34451224 34451278 -168634254 - MER5B DNA MER1_type -1 177 126 645 294 0 11 chr5 34451278 34451458 -168634074 + MIR SINE MIR 82 259 -3 4795 127 43 17 chr5 34451542 34452154 -168633378 + LTR39 LTR ERV1 1 638 -145 1514 67 91 207 chr5 34452154 34452604 -168632928 - MER48 LTR ERV1 0 398 1 4795 127 43 17 chr5 34452604 34452754 -168632778 + LTR39 LTR ERV1 638 783 0 22 0 0 0 chr5 34452847 34452869 -168632663 + AT_rich Low_complexity Low_complexity 1 22 0 278 250 16 0 chr5 34454027 34454091 -168631441 + MIR3 SINE MIR 92 156 -52 290 300 119 0 chr5 34454652 34454777 -168630755 - MIR SINE MIR -69 139 12 2076 141 3 3 chr5 34455578 34455890 -168629642 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 34455898 34455920 -168629612 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1690 176 24 14 chr5 34456040 34456336 -168629196 + AluJb SINE Alu 1 299 -13 980 283 80 6 chr5 34456640 34456965 -168628567 - MLT1G1 LTR MaLR -186 371 67 241 286 80 9 chr5 34456980 34457092 -168628440 - L1ME LINE L1 -480 5641 5522 550 299 112 8 chr5 34457093 34457462 -168628070 - L2 LINE L2 -33 3280 2803 1158 284 123 22 chr5 34458914 34459376 -168626156 + L3 LINE CR1 625 1133 -444 612 245 80 6 chr5 34459394 34459557 -168625975 + MER5B DNA MER1_type 1 175 -3 2325 101 3 0 chr5 34459579 34459886 -168625646 - AluSp SINE Alu -5 308 1 375 322 62 62 chr5 34459938 34460323 -168625209 + L2 LINE L2 2564 2948 -366 298 344 209 0 chr5 34460688 34460932 -168624600 + L3 LINE CR1 1272 1566 -11 231 313 0 0 chr5 34462009 34462073 -168623459 + L2 LINE L2 3209 3272 0 1877 145 10 17 chr5 34462255 34462552 -168622980 + AluSx SINE Alu 1 295 -17 204 182 0 0 chr5 34464000 34464044 -168621488 + (TA)n Simple_repeat Simple_repeat 2 45 0 455 293 144 10 chr5 34464403 34464611 -168620921 - LTR33 LTR ERVL -285 236 1 292 337 0 10 chr5 34464623 34464721 -168620811 + MIR SINE MIR 160 256 -6 204 305 42 32 chr5 34464735 34464830 -168620702 + MIR3 SINE MIR 109 204 -4 2434 68 0 0 chr5 34465310 34465605 -168619927 - AluY SINE Alu -16 295 1 599 251 115 21 chr5 34465822 34466065 -168619467 + L2 LINE L2 2971 3236 -77 705 328 72 25 chr5 34466178 34466693 -168618839 - MARNA DNA Mariner -18 568 30 680 206 74 37 chr5 34467377 34467452 -168618080 + MLT1D LTR MaLR 1 72 -433 617 257 44 113 chr5 34467452 34467884 -168617648 + MER93a LTR ERV1 1 402 0 680 206 74 37 chr5 34467884 34467997 -168617535 + MLT1D LTR MaLR 72 196 -309 1866 159 83 3 chr5 34468024 34468598 -168616934 - L1M4 LINE L1 -510 5674 4963 * 1988 227 117 30 chr5 34468596 34469481 -168616051 + L1MD2 LINE L1 5184 6192 -27 238 378 142 0 chr5 34470191 34470318 -168615214 - MIR3 SINE MIR -28 180 36 1009 186 6 0 chr5 34470330 34470507 -168615025 + MER45A DNA AcHobo 1 178 0 263 344 42 0 chr5 34471181 34471277 -168614255 + MIR SINE MIR 53 152 -110 226 189 0 0 chr5 34471397 34471434 -168614098 + THE1B LTR MaLR 1 37 -327 1149 266 30 76 chr5 34471542 34472237 -168613295 + L1ME3A LINE L1 5281 5943 -227 234 277 69 79 chr5 34472722 34472924 -168612608 + L1ME3A LINE L1 5968 6167 -3 200 158 26 0 chr5 34472931 34472969 -168612563 - MIR SINE MIR -127 135 97 193 200 25 0 chr5 34473717 34473757 -168611775 - L2 LINE L2 -2 3311 3271 517 279 248 12 chr5 34474595 34475049 -168610483 + L2 LINE L2 2621 3179 -134 236 158 53 0 chr5 34475050 34475126 -168610406 + (TA)n Simple_repeat Simple_repeat 1 80 0 562 250 25 25 chr5 34475127 34475287 -168610245 + L2 LINE L2 3154 3313 0 2024 136 0 10 chr5 34476433 34476766 -168608766 - AluJb SINE Alu 0 312 1 710 214 19 0 chr5 34476988 34477142 -168608390 - MER103 DNA DNA -2 164 8 431 326 7 17 chr5 34477219 34477378 -168608154 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 34477709 34477730 -168607802 + AT_rich Low_complexity Low_complexity 1 21 0 662 319 122 40 chr5 34477836 34478337 -168607195 + MLT1L LTR MaLR 1 542 -73 550 368 95 6 chr5 34479459 34479774 -168605758 + L3 LINE CR1 1046 1388 -189 1608 199 21 18 chr5 34479808 34480144 -168605388 + MER1B DNA MER1_type 1 337 0 265 293 195 35 chr5 34480153 34480327 -168605205 + L3 LINE CR1 1361 1562 -15 308 194 0 42 chr5 34480470 34480542 -168604990 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 34480904 34480935 -168604597 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 34480957 34481672 -168603860 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 34481672 34481724 -168603808 + CT-rich Low_complexity Low_complexity 2 53 0 1405 146 81 112 chr5 34482002 34482386 -168603146 + L1MA4A LINE L1 5928 6299 -4 210 253 211 11 chr5 34482596 34482691 -168602841 - MIR SINE MIR -120 142 29 337 288 50 43 chr5 34482705 34482844 -168602688 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 34484038 34484067 -168601465 + AT_rich Low_complexity Low_complexity 1 29 0 839 56 62 0 chr5 34484127 34484287 -168601245 + (TA)n Simple_repeat Simple_repeat 1 170 0 341 239 68 0 chr5 34485388 34485476 -168600056 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 34486919 34486962 -168598570 + (TG)n Simple_repeat Simple_repeat 2 44 0 303 177 0 0 chr5 34486962 34487024 -168598508 + (TA)n Simple_repeat Simple_repeat 2 63 0 206 293 40 40 chr5 34489337 34489412 -168596120 + L3b LINE CR1 1393 1467 -116 2331 98 10 0 chr5 34490278 34490575 -168594957 - AluSx SINE Alu -12 300 1 1300 202 81 17 chr5 34490712 34491009 -168594523 + MER2 DNA MER2_type 2 317 -28 525 246 65 0 chr5 34493201 34493339 -168592193 - MIR SINE MIR -13 249 103 231 292 0 0 chr5 34493386 34493451 -168592081 - L1 LINE L1 -1329 4817 4753 199 385 55 0 chr5 34493456 34493547 -168591985 - MIR SINE MIR -165 97 2 1056 233 126 82 chr5 34494526 34495195 -168590337 + HAL1 LINE L1 8 705 -1802 277 232 50 61 chr5 34495338 34495437 -168590095 + MIR SINE MIR 92 189 -73 315 339 42 0 chr5 34495440 34495558 -168589974 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 34496071 34496104 -168589428 + AT_rich Low_complexity Low_complexity 1 33 0 4884 42 2 0 chr5 34496106 34496701 -168588831 - L1PA7 LINE L1 -5 6149 5554 10611 88 0 2 chr5 34496701 34498164 -168587368 + L1P LINE L1 3173 4632 -1514 304 264 253 28 chr5 34499234 34499313 -168586219 - MIR SINE MIR -19 243 183 459 52 0 0 chr5 34499313 34499371 -168586161 + (TAG)n Simple_repeat Simple_repeat 1 58 0 304 264 253 28 chr5 34499371 34499473 -168586059 - MIR SINE MIR -79 183 21 816 298 138 62 chr5 34499679 34499883 -168585649 - L3 LINE CR1 -124 1453 1266 2278 95 7 0 chr5 34499883 34500179 -168585353 - AluSg SINE Alu -10 300 3 816 298 138 62 chr5 34500179 34500619 -168584913 - L3 LINE CR1 -311 1266 760 344 299 31 31 chr5 34500627 34500724 -168584808 + L1PA13 LINE L1 203 299 -6488 5139 181 43 8 chr5 34500726 34502446 -168583086 + L1PA16 LINE L1 4377 6161 -5 39699 80 5 2 chr5 34502581 34508714 -168576818 - L1PA6 LINE L1 0 6154 1 765 265 5 34 chr5 34508780 34508984 -168576548 + MLT1I LTR MaLR 195 392 -17 375 23 0 0 chr5 34509179 34509223 -168576309 + (CA)n Simple_repeat Simple_repeat 2 45 0 2892 13 0 0 chr5 34509885 34510203 -168575329 - AluYb8 SINE Alu 0 318 1 22 35 0 0 chr5 34510822 34510851 -168574681 + AT_rich Low_complexity Low_complexity 1 29 0 231 167 0 0 chr5 34510923 34510965 -168574567 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1650 109 0 18 chr5 34510990 34511219 -168574313 + AluSq SINE Alu 86 310 -3 1500 207 0 14 chr5 34511219 34511499 -168574033 - AluJb SINE Alu -36 276 1 25 31 0 0 chr5 34511538 34511570 -168573962 + AT_rich Low_complexity Low_complexity 1 32 0 696 236 14 88 chr5 34512323 34512448 -168573084 + L1MC5 LINE L1 7479 7612 -349 863 224 0 0 chr5 34512448 34512600 -168572932 + FRAM SINE Alu 1 152 -14 696 236 14 88 chr5 34512600 34512894 -168572638 + L1MC5 LINE L1 7612 7867 -94 690 245 14 98 chr5 34513297 34513363 -168572169 - MIR SINE MIR 0 262 192 2048 137 51 20 chr5 34513363 34513713 -168571819 - THE1B LTR MaLR -3 361 1 11409 78 28 21 chr5 34513713 34513808 -168571724 - THE1B-int LTR MaLR 0 1580 1487 2246 122 0 7 chr5 34513808 34514112 -168571420 + AluSx SINE Alu 1 302 -10 11409 78 28 21 chr5 34514112 34515585 -168569947 - THE1B-int LTR MaLR -93 1487 1 1951 147 69 20 chr5 34515585 34515932 -168569600 - THE1B LTR MaLR 0 364 1 690 245 14 98 chr5 34515932 34516149 -168569383 - MIR SINE MIR -67 195 1 412 254 0 36 chr5 34516886 34516996 -168568536 + MIR SINE MIR 34 139 -69 541 163 135 0 chr5 34517831 34517972 -168567560 - MER53 DNA DNA -27 162 3 669 180 129 14 chr5 34517982 34518121 -168567411 - FRAM SINE Alu -11 155 1 186 43 0 0 chr5 34518234 34518257 -168567275 + (CA)n Simple_repeat Simple_repeat 1 23 0 256 229 145 37 chr5 34519352 34519566 -168565966 + L1MC5 LINE L1 7501 7737 -224 537 242 47 0 chr5 34519687 34519708 -168565824 + MIR SINE MIR 128 147 -115 2775 123 9 20 chr5 34519708 34520147 -168565385 + Tigger2a DNA MER2_type 1 434 0 537 242 47 0 chr5 34520147 34520253 -168565279 + MIR SINE MIR 147 261 -1 303 348 33 54 chr5 34520272 34520456 -168565076 - MIR3 SINE MIR -23 185 6 357 179 152 83 chr5 34520614 34520759 -168564773 + L1ME2 LINE L1 5928 6082 -82 13099 118 83 10 chr5 34520759 34520875 -168564657 - Tigger1 DNA MER2_type 0 2418 2312 2365 100 0 0 chr5 34520875 34521174 -168564358 + AluSp SINE Alu 2 300 -13 13099 118 83 10 chr5 34521174 34521266 -168564266 - Tigger1 DNA MER2_type -106 2312 2228 2253 104 3 3 chr5 34521266 34521563 -168563969 + AluSx SINE Alu 1 297 -15 13099 118 83 10 chr5 34521563 34523585 -168561947 - Tigger1 DNA MER2_type -190 2228 24 361 209 0 0 chr5 34523591 34523677 -168561855 + L1ME2 LINE L1 6079 6164 0 190 279 23 0 chr5 34523794 34523837 -168561695 - MIR SINE MIR -135 73 30 270 280 280 0 chr5 34525100 34525225 -168560307 - MIR SINE MIR -78 184 25 2316 108 0 0 chr5 34525408 34525705 -168559827 + AluSg SINE Alu 1 297 -13 1067 272 32 66 chr5 34525734 34526263 -168559269 + LTR33 LTR ERVL 11 521 0 298 309 136 75 chr5 34526331 34526707 -168558825 - L2 LINE L2 -3 3310 2912 2101 120 7 0 chr5 34526756 34527047 -168558485 - AluSq SINE Alu -20 293 1 1838 146 68 7 chr5 34527334 34527628 -168557904 + AluSx SINE Alu 1 312 0 498 255 92 9 chr5 34527763 34527937 -168557595 + MIR SINE MIR 19 202 -60 360 259 18 9 chr5 34527964 34528076 -168557456 - MLT1L LTR MaLR -29 586 474 321 275 110 18 chr5 34528286 34528395 -168557137 + L2 LINE L2 3190 3308 -5 355 264 152 22 chr5 34528454 34528632 -168556900 - MER58C DNA MER1_type -13 202 2 254 250 52 0 chr5 34529025 34529121 -168556411 + MER103 DNA DNA 11 111 -55 205 330 20 50 chr5 34529518 34529618 -168555914 - MIR SINE MIR -93 115 19 350 327 71 39 chr5 34529693 34529848 -168555684 + MIR SINE MIR 20 177 -76 2490 62 0 7 chr5 34529864 34530168 -168555364 + AluY SINE Alu 3 304 -7 422 296 15 22 chr5 34530264 34530399 -168555133 - MIR3 SINE MIR -64 144 11 993 273 61 30 chr5 34530988 34531324 -168554208 + MLT1I LTR MaLR 3 354 -55 3317 77 9 7 chr5 34531324 34531767 -168553765 - MLT2A1 LTR ERVL 0 444 1 993 273 61 30 chr5 34531767 34531825 -168553707 + MLT1I LTR MaLR 354 409 0 348 248 191 13 chr5 34531826 34531983 -168553549 + MIR SINE MIR 78 262 0 1887 130 0 0 chr5 34532616 34532878 -168552654 + AluSx SINE Alu 32 293 -19 231 235 20 0 chr5 34533278 34533329 -168552203 + L2 LINE L2 3008 3059 -213 2503 233 113 19 chr5 34534584 34535633 -168549899 - Charlie2a DNA MER1_type 0 2862 1715 1055 195 183 12 chr5 34536234 34536485 -168549047 - AluJo SINE Alu -8 294 1 249 33 0 0 chr5 34536542 34536572 -168548960 + (TG)n Simple_repeat Simple_repeat 2 31 0 1596 200 19 0 chr5 34536575 34536845 -168548687 - AluJo SINE Alu -37 275 1 287 216 125 34 chr5 34536864 34536952 -168548580 - L2 LINE L2 -4 3309 3214 1332 257 157 8 chr5 34536957 34537447 -168548085 - L2 LINE L2 -889 2425 1863 1817 212 37 0 chr5 34537568 34537950 -168547582 - MSTD LTR MaLR 0 396 1 1115 226 81 53 chr5 34537956 34538386 -168547146 + MER39 LTR ERV1 262 703 -4 1484 285 86 23 chr5 34538394 34538920 -168546612 - L2 LINE L2 -1458 1856 1298 1780 141 67 23 chr5 34538921 34539280 -168546252 - MSTA LTR MaLR 0 375 1 3833 179 32 6 chr5 34539280 34539993 -168545539 - MSTA-int LTR MaLR 0 1651 920 2581 152 9 0 chr5 34539993 34540435 -168545097 - MSTA-int LTR MaLR -1205 446 1 2568 107 54 10 chr5 34540435 34540845 -168544687 - MSTA LTR MaLR 0 428 1 462 354 29 17 chr5 34540846 34541021 -168544511 - L2 LINE L2 -2014 1300 1124 500 265 27 45 chr5 34541265 34541364 -168544168 + L1ME1 LINE L1 5942 6041 -125 2174 168 51 19 chr5 34541364 34541775 -168543757 - MSTB LTR MaLR 0 426 3 500 265 27 45 chr5 34541775 34541898 -168543634 + L1ME1 LINE L1 6041 6160 -6 525 71 0 0 chr5 34541955 34542025 -168543507 + (TA)n Simple_repeat Simple_repeat 1 70 0 2237 118 0 3 chr5 34542059 34542439 -168543093 + AluSg SINE Alu 4 382 0 451 228 31 39 chr5 34542479 34542606 -168542926 - Charlie2 DNA MER1_type -2522 340 215 847 92 171 6 chr5 34542622 34542786 -168542746 - L1MA5 LINE L1 -2 6298 6108 2024 160 3 3 chr5 34542786 34543099 -168542433 + AluSq SINE Alu 1 313 0 35571 92 8 8 chr5 34543100 34546786 -168538746 + L1PA6 LINE L1 6 3684 -2470 279 0 0 0 chr5 34546786 34546817 -168538715 + (CA)n Simple_repeat Simple_repeat 2 32 0 35571 92 8 8 chr5 34546817 34549281 -168536251 + L1PA6 LINE L1 3684 6148 -6 1416 130 40 0 chr5 34549291 34549544 -168535988 - L1MA5 LINE L1 -175 6125 5863 237 319 50 39 chr5 34549544 34549726 -168535806 - Charlie2 DNA MER1_type -2572 210 27 284 192 0 0 chr5 34550000 34550052 -168535480 - MER66A LTR ERV1 -140 338 287 216 362 0 64 chr5 34550405 34550499 -168535033 - MIR SINE MIR -76 132 45 2653 137 70 2 chr5 34550499 34550953 -168534579 - MER31A LTR ERV1 0 485 1 255 210 76 1 chr5 34553393 34553521 -168532011 + MLT1I LTR MaLR 1 142 -267 235 324 98 17 chr5 34553689 34553862 -168531670 + MLT1H LTR MaLR 347 533 -16 346 338 56 0 chr5 34553892 34554034 -168531498 + MIR SINE MIR 102 251 -11 318 26 0 0 chr5 34554079 34554118 -168531414 + (TG)n Simple_repeat Simple_repeat 1 39 0 198 0 0 0 chr5 34554117 34554139 -168531393 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 601 258 93 31 chr5 34554979 34555143 -168530389 + MIR SINE MIR 56 235 -27 1834 118 38 79 chr5 34555143 34555534 -168529998 + THE1C LTR MaLR 1 375 0 601 258 93 31 chr5 34555534 34555563 -168529969 + MIR SINE MIR 235 261 -1 28 61 0 0 chr5 34555564 34555613 -168529919 + AT_rich Low_complexity Low_complexity 1 49 0 2372 85 0 25 chr5 34556807 34557126 -168528406 - AluY SINE Alu 0 311 1 1050 238 5 14 chr5 34557742 34557965 -168527567 + MER58A DNA MER1_type 4 224 0 228 214 29 97 chr5 34557973 34558076 -168527456 + HAL1 LINE L1 2058 2153 -354 434 175 0 0 chr5 34558504 34558584 -168526948 + MLT1A1 LTR MaLR 1 80 -285 6505 68 8 2 chr5 34558584 34559678 -168525854 + L1PA8A LINE L1 5026 6124 -7 531 69 0 0 chr5 34559683 34559755 -168525777 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 1129 167 6 130 chr5 34559755 34560078 -168525454 + MLT1A1 LTR MaLR 83 365 0 238 235 0 0 chr5 34560157 34560208 -168525324 - MER5A DNA MER1_type -138 51 1 189 341 123 43 chr5 34560336 34560474 -168525058 + MIR SINE MIR 49 197 -65 23 0 0 0 chr5 34560502 34560525 -168525007 + AT_rich Low_complexity Low_complexity 1 23 0 1352 210 37 23 chr5 34561030 34561383 -168524149 + THE1C LTR MaLR 1 358 -17 1474 244 5 5 chr5 34561935 34562333 -168523199 + L1M4 LINE L1 2459 2856 -3290 193 333 69 0 chr5 34562443 34562515 -168523017 - L2 LINE L2 -95 3177 3101 1771 199 10 0 chr5 34562869 34563170 -168522362 - AluJb SINE Alu -8 304 1 225 228 211 0 chr5 34563224 34563281 -168522251 + L2 LINE L2 3238 3306 -7 221 287 17 43 chr5 34563835 34563950 -168521582 + MIR3 SINE MIR 95 206 -2 285 121 133 60 chr5 34564770 34564853 -168520679 - MER103 DNA DNA -19 147 59 1811 176 0 0 chr5 34565182 34565460 -168520072 + AluSx SINE Alu 1 278 -34 207 0 0 0 chr5 34565465 34565488 -168520044 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2193 140 7 0 chr5 34565626 34565933 -168519599 + AluSx SINE Alu 1 309 -3 981 206 37 19 chr5 34566529 34566743 -168518789 - MER20 DNA MER1_type -1 218 1 1601 153 52 55 chr5 34566820 34567185 -168518347 + THE1B LTR MaLR 1 364 0 204 347 73 27 chr5 34567462 34567612 -168517920 - MIR3 SINE MIR -25 183 27 1655 187 3 11 chr5 34569030 34569340 -168516192 - AluJo SINE Alu 0 309 2 303 240 53 13 chr5 34569344 34569419 -168516113 - L2 LINE L2 -16 3297 3220 2521 91 0 0 chr5 34569574 34569883 -168515649 + AluSg SINE Alu 1 309 -1 251 239 15 0 chr5 34569983 34570050 -168515482 + L1ME4a LINE L1 5969 6036 -85 1177 128 66 0 chr5 34570098 34570309 -168515223 - Tigger7 DNA MER2_type -1 2490 2266 * 1184 240 39 0 chr5 34570305 34570563 -168514969 - Tigger7 DNA MER2_type -2219 268 1 744 226 24 0 chr5 34572254 34572418 -168513114 + MER58A DNA MER1_type 49 216 -8 1291 117 0 0 chr5 34573150 34573330 -168512202 - AluSp SINE Alu -1 312 133 637 263 129 0 chr5 34573421 34573615 -168511917 + MIR SINE MIR 19 237 -25 1071 149 0 0 chr5 34573669 34573844 -168511688 + MER58B DNA MER1_type 167 341 0 2366 79 0 10 chr5 34574217 34574521 -168511011 - AluY SINE Alu -8 303 3 460 61 0 15 chr5 34574537 34574603 -168510929 - L1PA16 LINE L1 -10 6156 6092 191 243 95 27 chr5 34576439 34576513 -168509019 - MIR SINE MIR -68 194 116 226 325 86 68 chr5 34577406 34577569 -168507963 + MIR3 SINE MIR 19 184 -24 336 287 127 27 chr5 34577723 34577873 -168507659 - MIR3 SINE MIR -14 194 30 317 58 69 23 chr5 34578124 34578211 -168507321 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 284 284 231 53 chr5 34578398 34578701 -168506831 + MLT1K LTR MaLR 115 471 -117 1927 132 10 27 chr5 34578784 34579079 -168506453 + AluSx SINE Alu 1 290 -22 5510 130 12 5 chr5 34579306 34580728 -168504804 - L1PA15 LINE L1 -6 6159 4734 3855 197 16 14 chr5 34580728 34582005 -168503527 - L1PA12 LINE L1 -3963 3621 2321 317 325 58 25 chr5 34583010 34583254 -168502278 - L1PA12 LINE L1 -6595 990 1 2583 132 5 0 chr5 34583504 34583952 -168501580 - L1P LINE L1 -1013 5133 4684 209 108 27 0 chr5 34583972 34584009 -168501523 + GA-rich Low_complexity Low_complexity 2 39 0 2389 90 0 0 chr5 34584020 34584319 -168501213 + AluY SINE Alu 1 299 -12 5813 82 7 27 chr5 34584322 34585204 -168500328 + L1PA10 LINE L1 5305 6168 0 414 273 95 24 chr5 34585259 34585484 -168500048 + MLT1J LTR MaLR 1 237 -275 914 228 56 19 chr5 34585545 34585760 -168499772 + MER58A DNA MER1_type 2 224 0 1159 232 55 27 chr5 34586188 34586634 -168498898 + MLT2B1 LTR ERVL 1 495 -20 295 121 35 0 chr5 34586664 34586722 -168498810 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1001 209 23 27 chr5 34587077 34587297 -168498235 + MER20 DNA MER1_type 1 219 0 2204 178 15 10 chr5 34587636 34588030 -168497502 - MSTD LTR MaLR 0 396 1 266 239 100 31 chr5 34588158 34588288 -168497244 - MIR SINE MIR -4 258 120 532 264 50 13 chr5 34588973 34589132 -168496400 + MER45A DNA AcHobo 6 170 -8 775 299 96 15 chr5 34589135 34589616 -168495916 - ERVL LTR ERVL -426 5338 4819 678 167 44 0 chr5 34589763 34589915 -168495617 + FLAM_C SINE Alu 1 157 0 1945 120 70 22 chr5 34589942 34590300 -168495232 + THE1C LTR MaLR 1 375 0 4136 47 10 2 chr5 34590571 34591231 -168494301 - L1PA5 LINE L1 -650 5504 4841 5626 31 0 0 chr5 34591231 34591872 -168493660 + L1PA5 LINE L1 5493 6146 -8 239 246 191 55 chr5 34592377 34592487 -168493045 - L2 LINE L2 -10 3303 3179 1441 175 0 35 chr5 34592515 34592772 -168492760 + AluJo SINE Alu 48 295 -17 1123 187 0 11 chr5 34592788 34592975 -168492557 + AluJo SINE Alu 118 302 -10 225 0 0 0 chr5 34593014 34593025 -168492507 + (CA)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr5 34593025 34593050 -168492482 + (CA)n Simple_repeat Simple_repeat 2 26 0 281 361 58 5 chr5 34593211 34593419 -168492113 - ERVL LTR ERVL -560 5204 4986 328 287 11 0 chr5 34593466 34593553 -168491979 + L1MC4 LINE L1 6616 6703 -1339 1139 164 250 27 chr5 34593650 34594128 -168491404 - LTR29 LTR ERV1 0 607 1 198 354 88 0 chr5 34594394 34594507 -168491025 - L2 LINE L2 -549 2765 2643 323 281 116 49 chr5 34595711 34595875 -168489657 - MIR3 SINE MIR 0 208 34 198 0 0 0 chr5 34596724 34596746 -168488786 + (T)n Simple_repeat Simple_repeat 1 22 0 548 232 40 73 chr5 34596865 34596946 -168488586 - MIR SINE MIR -1 261 179 1805 65 119 8 chr5 34596946 34597207 -168488325 - AluSc SINE Alu -19 290 1 548 232 40 73 chr5 34597207 34597302 -168488230 - MIR SINE MIR -83 179 91 264 288 92 65 chr5 34597551 34597704 -168487828 + MIR3 SINE MIR 16 172 -36 480 35 0 0 chr5 34597707 34597765 -168487767 + (TC)n Simple_repeat Simple_repeat 1 58 0 2476 47 0 22 chr5 34597881 34598199 -168487333 - AluY SINE Alu 0 311 1 25 31 0 0 chr5 34598350 34598382 -168487150 + AT_rich Low_complexity Low_complexity 1 32 0 2053 137 56 22 chr5 34598418 34598827 -168486705 + L1MB8 LINE L1 5740 6162 -16 21 57 0 0 chr5 34599613 34599648 -168485884 + AT_rich Low_complexity Low_complexity 1 35 0 614 191 16 32 chr5 34601436 34601562 -168483970 + FAM SINE Alu 42 165 -20 1981 149 0 0 chr5 34601646 34601951 -168483581 - AluSx SINE Alu 0 305 1 258 192 0 0 chr5 34603711 34603763 -168481769 + (TA)n Simple_repeat Simple_repeat 2 53 0 2638 45 0 10 chr5 34603835 34604147 -168481385 - AluY SINE Alu -2 309 1 498 203 102 0 chr5 34604147 34604275 -168481257 + MER58C DNA MER1_type 71 211 -4 24 53 0 0 chr5 34604580 34604618 -168480914 + AT_rich Low_complexity Low_complexity 1 38 0 211 388 103 0 chr5 34604972 34605137 -168480395 - MIR3 SINE MIR -23 185 4 2124 124 3 0 chr5 34605225 34605523 -168480009 + AluSx SINE Alu 1 299 -13 2404 53 3 10 chr5 34605766 34606065 -168479467 - AluY SINE Alu -14 297 1 643 168 48 16 chr5 34607238 34607363 -168478169 + FLAM_A SINE Alu 5 133 0 23 33 0 0 chr5 34607571 34607601 -168477931 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr5 34607656 34607678 -168477854 + (T)n Simple_repeat Simple_repeat 1 22 0 2214 120 0 10 chr5 34608103 34608411 -168477121 - AluSx SINE Alu -7 305 1 288 193 18 0 chr5 34611253 34611310 -168474222 + AluJb SINE Alu 190 247 -55 1238 157 9 14 chr5 34611310 34611520 -168474012 - AluJo SINE Alu -99 213 5 292 286 29 29 chr5 34612113 34612218 -168473314 - MIR3 SINE MIR -23 185 81 354 269 118 47 chr5 34613807 34614097 -168471435 - L1ME LINE L1 -339 5823 5508 296 149 194 0 chr5 34614453 34614520 -168471012 - AluJo SINE Alu -1 301 222 1029 176 0 28 chr5 34614520 34614696 -168470836 - AluJo SINE Alu -141 171 1 868 228 11 17 chr5 34618475 34618655 -168466877 - AluJo SINE Alu -12 300 122 894 160 100 0 chr5 34619061 34619211 -168466321 + FAM SINE Alu 4 168 -7 2288 77 40 3 chr5 34619219 34619518 -168466014 + AluY SINE Alu 1 310 -1 32 43 0 0 chr5 34621525 34621571 -168463961 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 34622485 34622508 -168463024 + AT_rich Low_complexity Low_complexity 1 23 0 1536 156 141 8 chr5 34623020 34623283 -168462249 - AluJb SINE Alu -4 298 1 2053 200 73 65 chr5 34623335 34623885 -168461647 + MLT2B3 LTR ERVL 1 554 0 1732 171 0 29 chr5 34624275 34624584 -168460948 - AluJb SINE Alu -10 302 3 311 190 281 33 chr5 34625134 34625255 -168460277 - MER5A DNA MER1_type -1 188 38 27 0 0 0 chr5 34625316 34625343 -168460189 + AT_rich Low_complexity Low_complexity 1 27 0 1359 178 23 23 chr5 34625494 34625752 -168459780 - AluJo SINE Alu -51 261 4 382 238 145 45 chr5 34625754 34626023 -168459509 - HAL1 LINE L1 -188 2319 2024 2108 139 0 3 chr5 34626038 34626340 -168459192 + AluSx SINE Alu 1 301 -11 1673 186 21 3 chr5 34626350 34626640 -168458892 + AluJb SINE Alu 1 295 -17 693 183 0 0 chr5 34626666 34626770 -168458762 + FLAM_C SINE Alu 2 105 -38 393 281 137 21 chr5 34626772 34627145 -168458387 - HAL1 LINE L1 -938 1569 1154 4914 147 75 12 chr5 34627465 34628310 -168457222 + MER4D LTR ERV1 1 898 -5 460 227 145 68 chr5 34628438 34628734 -168456798 + MLT1L LTR MaLR 208 437 -74 881 164 26 0 chr5 34628847 34628999 -168456533 + FRAM SINE Alu 1 155 -21 2724 113 11 5 chr5 34629023 34629396 -168456136 - THE1C LTR MaLR 0 375 1 240 317 192 0 chr5 34630035 34630139 -168455393 + MIR SINE MIR 26 149 -113 2024 139 174 8 chr5 34630144 34630511 -168455021 + MSTA LTR MaLR 1 428 0 264 271 141 12 chr5 34630919 34631004 -168454528 - LTR67 LTR ERVL -412 145 50 565 288 40 45 chr5 34631024 34631122 -168454410 - MER34 LTR ERV1 -30 512 415 2627 179 54 120 chr5 34631122 34631899 -168453633 + LTR8A LTR ERV1 2 727 0 565 288 40 45 chr5 34631899 34632022 -168453510 - MER34 LTR ERV1 -127 415 292 2343 96 3 0 chr5 34632031 34632333 -168453199 - AluSg SINE Alu -7 303 1 464 314 83 21 chr5 34632392 34632634 -168452898 - MER34 LTR ERV1 -274 268 12 207 0 0 0 chr5 34632995 34633018 -168452514 + (T)n Simple_repeat Simple_repeat 1 23 0 250 333 96 45 chr5 34633072 34633249 -168452283 + MER5A DNA MER1_type 4 189 0 35 24 0 0 chr5 34633280 34633322 -168452210 + AT_rich Low_complexity Low_complexity 1 42 0 298 287 198 0 chr5 34633681 34633838 -168451694 - MER5A DNA MER1_type 0 189 2 203 149 0 21 chr5 34634133 34634180 -168451352 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2063 167 50 26 chr5 34634194 34634577 -168450955 - MER57A LTR ERV1 0 403 12 1274 144 159 30 chr5 34634626 34634896 -168450636 + AluSg SINE Alu 1 305 -5 842 212 56 4 chr5 34634901 34635225 -168450307 + MLT1D LTR MaLR 9 378 -127 473 141 6 65 chr5 34635248 34635418 -168450114 + GA-rich Low_complexity Low_complexity 5 164 0 236 339 0 0 chr5 34635429 34635491 -168450041 + polypurine Low_complexity Low_complexity 4 65 0 265 252 13 26 chr5 34635492 34635647 -168449885 + GA-rich Low_complexity Low_complexity 4 156 0 283 264 6 22 chr5 34635660 34635838 -168449694 + GA-rich Low_complexity Low_complexity 2 176 0 959 222 16 0 chr5 34637255 34637440 -168448092 - MER5A DNA MER1_type 0 189 2 1274 49 12 12 chr5 34638651 34638813 -168446719 - L1PA6 LINE L1 0 6154 5993 294 150 10 0 chr5 34638906 34638966 -168446566 + L1MC4 LINE L1 7927 7989 -6 190 0 32 32 chr5 34639087 34639118 -168446414 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2285 94 0 16 chr5 34639173 34639480 -168446052 - AluSx SINE Alu -10 302 1 289 200 0 0 chr5 34639481 34639526 -168446006 - L1ME1 LINE L1 -56 6110 6066 314 246 0 0 chr5 34640841 34640906 -168444626 + MIR SINE MIR 92 156 -106 448 169 28 113 chr5 34640991 34641133 -168444399 - MER5C DNA MER1_type 0 324 195 25 31 0 0 chr5 34641193 34641225 -168444307 + AT_rich Low_complexity Low_complexity 1 32 0 2295 121 0 3 chr5 34641427 34641740 -168443792 - AluSx SINE Alu 0 312 1 262 333 50 0 chr5 34641858 34641957 -168443575 - MER5C DNA MER1_type -219 105 2 * 388 208 0 0 chr5 34641957 34642029 -168443503 - MIR SINE MIR -45 217 146 2263 104 3 22 chr5 34642817 34643135 -168442397 + AluSx SINE Alu 1 312 0 623 174 109 22 chr5 34643525 34643663 -168441869 - AluJo SINE Alu -40 272 123 24 0 0 0 chr5 34643663 34643687 -168441845 + AT_rich Low_complexity Low_complexity 1 24 0 734 197 163 0 chr5 34643713 34643891 -168441641 + Tigger5 DNA MER2_type 2117 2323 0 369 0 0 0 chr5 34643917 34643958 -168441574 + (TG)n Simple_repeat Simple_repeat 2 42 0 299 297 10 10 chr5 34643958 34644059 -168441473 - L1MC4 LINE L1 -149 7893 7793 812 211 155 10 chr5 34644071 34644265 -168441267 + MER97a DNA MER1_type? 13 234 -660 1436 176 81 67 chr5 34644278 34644709 -168440823 + LTR48 LTR ERV1 1 453 -246 2106 137 81 0 chr5 34644709 34645066 -168440466 + LTR24C LTR ERV1 248 633 -2 1771 185 7 0 chr5 34645142 34645439 -168440093 + AluJb SINE Alu 1 299 -13 710 196 18 0 chr5 34645536 34645648 -168439884 - FLAM_A SINE Alu -19 114 1 291 272 87 0 chr5 34645740 34645843 -168439689 + MIR SINE MIR 90 201 -61 * 460 264 104 0 chr5 34645820 34645964 -168439568 - MIR SINE MIR -12 250 92 349 299 18 55 chr5 34646043 34646207 -168439325 - MER52A LTR ERV1 -6 1749 1592 * 961 223 3 106 chr5 34646205 34646497 -168439035 - MER52A LTR ERV1 -285 1470 1209 * 2069 185 24 18 chr5 34646478 34647116 -168438416 - LTR28 LTR ERV1 -141 495 1 713 151 50 8 chr5 34647144 34647263 -168438269 + FLAM_C SINE Alu 3 126 -7 351 0 0 0 chr5 34647272 34647311 -168438221 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 778 240 6 6 chr5 34647327 34647498 -168438034 + MER92B LTR ERV1 1 171 -465 987 179 97 151 chr5 34647505 34647840 -168437692 - LTR29 LTR ERV1 -46 576 271 204 40 0 0 chr5 34647840 34647865 -168437667 + (TC)n Simple_repeat Simple_repeat 2 26 0 987 179 97 151 chr5 34647865 34647994 -168437538 - LTR29 LTR ERV1 -351 271 137 236 313 10 10 chr5 34647999 34648095 -168437437 - MER34 LTR ERV1 -446 96 1 * 1541 165 92 104 chr5 34648095 34648405 -168437127 + MER92B LTR ERV1 157 460 -176 1496 166 21 46 chr5 34648405 34648689 -168436843 - AluJo SINE Alu -35 277 1 1541 165 92 104 chr5 34648689 34648864 -168436668 + MER92B LTR ERV1 460 636 0 2496 176 75 124 chr5 34648984 34649749 -168435783 - LTR8A LTR ERV1 0 727 1 321 292 130 38 chr5 34649773 34649958 -168435574 - LTR33 LTR ERVL -3 518 317 2411 180 22 24 chr5 34650060 34650073 -168435459 + MER65C LTR ERV1 1 13 -448 3167 156 36 39 chr5 34650073 34650451 -168435081 + LTR26B LTR ERV1 1 378 -153 1965 158 0 7 chr5 34650451 34650754 -168434778 + AluSx SINE Alu 1 301 -11 3167 156 36 39 chr5 34650754 34650908 -168434624 + LTR26B LTR ERV1 378 531 0 2411 180 22 24 chr5 34650908 34651356 -168434176 + MER65C LTR ERV1 13 461 0 226 184 0 0 chr5 34651663 34651701 -168433831 - LTR16A1 LTR ERVL 0 457 420 360 300 29 12 chr5 34651732 34651902 -168433630 + L1MC4a LINE L1 4034 4206 -1940 314 276 92 75 chr5 34651898 34652072 -168433460 + L1MC4a LINE L1 5422 5598 -2210 * 593 258 47 25 chr5 34652131 34652376 -168433156 + L1MC4a LINE L1 5692 5943 -178 3060 171 55 4 chr5 34653272 34653799 -168431733 - MER21A LTR ERV1 0 931 378 518 178 107 12 chr5 34653805 34653999 -168431533 - MER21A LTR ERV1 -667 264 14 257 255 20 0 chr5 34654005 34654107 -168431425 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 675 231 8 8 chr5 34654447 34654577 -168430955 - FLAM_A SINE Alu -3 130 1 563 274 28 36 chr5 34654686 34654934 -168430598 - MER34B LTR ERV1 0 565 320 2229 120 0 3 chr5 34654959 34655268 -168430264 - AluSc SINE Alu -1 308 1 207 100 0 0 chr5 34655273 34655303 -168430229 + (T)n Simple_repeat Simple_repeat 1 30 0 1588 204 10 13 chr5 34655307 34655620 -168429912 - AluJb SINE Alu 0 312 1 2154 106 0 7 chr5 34655647 34655950 -168429582 + AluSx SINE Alu 2 302 0 323 261 70 26 chr5 34656059 34656174 -168429358 - MER34B LTR ERV1 -445 120 1 395 337 17 11 chr5 34656876 34657054 -168428478 - L1ME LINE L1 -429 5692 5514 1010 172 50 10 chr5 34657457 34657655 -168427877 + AluJo SINE Alu 107 312 0 363 186 0 12 chr5 34657678 34657764 -168427768 - L1MA7 LINE L1 0 6291 6207 671 142 42 0 chr5 34657992 34658112 -168427420 - L1MA6 LINE L1 -80 6220 6096 325 254 111 56 chr5 34658175 34658301 -168427231 - MER5A DNA MER1_type -56 133 1 468 293 25 13 chr5 34658567 34658724 -168426808 - MLT1G1 LTR MaLR -7 588 430 531 260 32 13 chr5 34658819 34658973 -168426559 - MLT1H1 LTR MaLR -367 188 32 27 49 0 0 chr5 34659117 34659158 -168426374 + AT_rich Low_complexity Low_complexity 1 41 0 2267 120 0 0 chr5 34661631 34661940 -168423592 - AluSq SINE Alu -4 309 1 573 212 0 17 chr5 34662145 34662263 -168423269 + MLT1F LTR MaLR 1 116 -426 417 285 13 7 chr5 34662369 34662520 -168423012 + MER103 DNA DNA 13 164 -2 2236 111 0 7 chr5 34662600 34662898 -168422634 + AluSx SINE Alu 1 296 -16 194 353 15 0 chr5 34662904 34662972 -168422560 - L3 LINE CR1 -459 1118 1050 25 75 0 0 chr5 34663179 34663232 -168422300 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr5 34663382 34663407 -168422125 + AT_rich Low_complexity Low_complexity 1 25 0 1893 174 0 7 chr5 34663407 34663717 -168421815 - AluJb SINE Alu -4 308 1 2279 103 33 43 chr5 34664194 34664562 -168420970 - THE1B LTR MaLR 0 364 1 1661 199 0 7 chr5 34664747 34665049 -168420483 - AluJo SINE Alu -10 302 3 3687 213 20 50 chr5 34665068 34666012 -168419520 + MER31-int LTR ERV1 3329 4244 -692 310 245 93 29 chr5 34666016 34666155 -168419377 + LTR37A LTR ERV1 1 148 -278 3620 148 43 50 chr5 34666625 34666880 -168418652 - L1MA7 LINE L1 -303 5988 5733 2530 52 0 16 chr5 34666880 34667186 -168418346 + AluY SINE Alu 1 301 -10 3620 148 43 50 chr5 34667186 34668142 -168417390 - L1MA7 LINE L1 -558 5733 4785 279 0 0 0 chr5 34668313 34668344 -168417188 + (TG)n Simple_repeat Simple_repeat 1 31 0 386 271 129 39 chr5 34668522 34668677 -168416855 + MER5A DNA MER1_type 16 184 -5 2819 164 39 30 chr5 34668751 34668906 -168416626 + MER89 LTR ERV1 4 156 -403 1877 157 7 10 chr5 34668906 34669199 -168416333 - AluJb SINE Alu -20 292 1 2819 164 39 30 chr5 34669199 34669585 -168415947 + MER89 LTR ERV1 156 550 -9 2001 138 0 23 chr5 34670153 34670458 -168415074 - AluSx SINE Alu -14 298 1 369 247 10 10 chr5 34671524 34671621 -168413911 + MER115 DNA AcHobo 597 693 0 4673 115 86 118 chr5 34671955 34673376 -168412156 - pTR5 LTR ERV1 0 2438 743 2116 186 65 108 chr5 34673868 34674561 -168410971 + LTR8A LTR ERV1 1 663 -64 553 110 0 0 chr5 34676255 34676328 -168409204 + FRAM SINE Alu 70 142 -34 2500 110 31 6 chr5 34676594 34676949 -168408583 + THE1B LTR MaLR 1 364 0 675 218 40 17 chr5 34677012 34677186 -168408346 - LTR16C LTR ERVL -15 476 299 559 175 132 9 chr5 34677439 34677553 -168407979 + MER5A DNA MER1_type 3 130 -59 1387 198 31 42 chr5 34677555 34677909 -168407623 - L1ME2 LINE L1 -145 6019 5670 583 220 53 8 chr5 34678038 34678170 -168407362 + MER82 DNA MER2_type 294 431 -222 2262 114 7 0 chr5 34678178 34678484 -168407048 + AluSx SINE Alu 1 308 -4 428 211 266 0 chr5 34678517 34678626 -168406906 + MER82 DNA MER2_type 510 647 -6 1590 178 45 14 chr5 34678656 34678823 -168406709 - AluJo SINE Alu -17 295 114 468 0 0 0 chr5 34678823 34678875 -168406657 + (TA)n Simple_repeat Simple_repeat 2 53 0 1590 178 45 14 chr5 34678875 34678993 -168406539 - AluJo SINE Alu -198 114 1 792 169 15 0 chr5 34678999 34679129 -168406403 - FLAM_C SINE Alu -1 132 1 1084 181 18 53 chr5 34679950 34680176 -168405356 - MER20 DNA MER1_type 0 219 2 192 317 0 0 chr5 34680249 34680309 -168405223 - L2 LINE L2 -218 3054 2995 239 276 0 26 chr5 34685056 34685132 -168400400 + MLT1H LTR MaLR 95 168 -381 3036 84 28 56 chr5 34685361 34685860 -168399672 + L1PB2 LINE L1 5666 6150 -1 532 312 45 10 chr5 34685942 34686141 -168399391 - MIR SINE MIR -51 211 6 2457 80 7 0 chr5 34686189 34686489 -168399043 + AluSq SINE Alu 1 302 -11 2126 108 10 20 chr5 34687353 34687650 -168397882 - AluSx SINE Alu -18 294 1 1222 251 26 62 chr5 34688270 34688736 -168396796 + MLT1C LTR MaLR 2 450 -17 268 277 124 36 chr5 34688812 34689022 -168396510 - MIR SINE MIR -15 247 21 266 283 71 9 chr5 34689686 34689799 -168395733 + L2 LINE L2 3153 3272 0 461 228 235 0 chr5 34690824 34690973 -168394559 - MER5A DNA MER1_type -2 187 4 471 323 47 17 chr5 34691136 34691371 -168394161 + L2 LINE L2 2243 2484 -830 535 342 46 26 chr5 34691551 34691858 -168393674 + LTR16A1 LTR ERVL 141 453 -4 23 0 0 0 chr5 34692029 34692052 -168393480 + AT_rich Low_complexity Low_complexity 1 23 0 229 210 37 37 chr5 34692752 34692833 -168392699 + MLT1K LTR MaLR 183 263 -325 1007 155 12 6 chr5 34693571 34693732 -168391800 - AluSg/x SINE Alu -22 288 127 313 222 59 111 chr5 34693839 34693992 -168391540 - HAL1 LINE L1 -2342 165 21 233 158 0 0 chr5 34694738 34694776 -168390756 - LTR65 LTR ERV1 -285 384 347 2117 138 47 11 chr5 34695504 34695866 -168389666 - THE1C LTR MaLR 0 375 1 2277 125 0 0 chr5 34696363 34696666 -168388866 - AluSx SINE Alu -9 303 1 38362 86 6 13 chr5 34697250 34703448 -168382084 + L1PA6 LINE L1 5 6154 0 899 222 16 0 chr5 34704668 34704853 -168380679 + MER5A DNA MER1_type 2 189 0 284 349 54 12 chr5 34705737 34705903 -168379629 + MIR SINE MIR 42 214 -48 297 0 0 0 chr5 34706137 34706170 -168379362 + (CA)n Simple_repeat Simple_repeat 1 33 0 249 260 42 0 chr5 34707029 34707125 -168378407 + MIR SINE MIR 66 165 -97 284 338 36 36 chr5 34709712 34709851 -168375681 + MIR3 SINE MIR 25 163 -45 913 158 6 6 chr5 34710099 34710262 -168375270 - L1 LINE L1 -1284 4862 4697 6720 67 11 10 chr5 34710262 34711313 -168374219 + L1PA13 LINE L1 5108 6160 -3 188 152 0 0 chr5 34711389 34711422 -168374110 - MIR SINE MIR -14 248 216 299 353 65 30 chr5 34711523 34711755 -168373777 - L2 LINE L2 -181 3091 2852 260 325 33 25 chr5 34712003 34712123 -168373409 + Tigger8 DNA MER2_type 539 659 -7 1744 169 3 17 chr5 34712691 34712986 -168372546 - AluSx SINE Alu -21 291 1 251 167 90 39 chr5 34712995 34713073 -168372459 + MER104 DNA Tc2 35 116 -64 381 302 22 50 chr5 34713540 34713722 -168371810 - MIR SINE MIR -57 205 29 1639 143 103 50 chr5 34713910 34714426 -168371106 + LTR18B LTR ERVL 1 591 -23 826 164 16 8 chr5 34714948 34715076 -168370456 + AluJb SINE Alu 163 291 -21 3715 127 27 14 chr5 34715147 34715667 -168369865 + MER1A DNA MER1_type 1 527 0 2224 129 3 0 chr5 34717036 34717346 -168368186 + AluSx SINE Alu 1 311 -1 5439 40 3 0 chr5 34717749 34718370 -168367162 + L1PA5 LINE L1 5532 6154 0 430 284 35 47 chr5 34718696 34718865 -168366667 + MER5B DNA MER1_type 6 172 -6 1708 187 7 0 chr5 34718937 34719226 -168366306 + AluJo SINE Alu 1 291 -21 561 188 169 0 chr5 34719499 34719653 -168365879 - MER5A DNA MER1_type -1 188 9 2095 138 3 0 chr5 34720071 34720367 -168365165 - AluSx SINE Alu -15 297 1 1108 231 63 7 chr5 34720645 34720914 -168364618 + MLT1H LTR MaLR 6 289 -260 705 269 109 0 chr5 34721226 34721427 -168364105 - MIR SINE MIR -10 252 30 233 318 75 30 chr5 34721613 34721814 -168363718 - L2 LINE L2 -213 3059 2850 360 288 29 29 chr5 34722104 34722243 -168363289 - MER20 DNA MER1_type -17 202 64 23 0 0 0 chr5 34722579 34722602 -168362930 + AT_rich Low_complexity Low_complexity 1 23 0 1816 139 25 7 chr5 34722602 34722883 -168362649 - AluSx SINE Alu -26 286 1 186 71 0 0 chr5 34723096 34723124 -168362408 + (T)n Simple_repeat Simple_repeat 1 28 0 1469 186 18 21 chr5 34723624 34723903 -168361629 + AluJo SINE Alu 12 289 -23 250 314 77 39 chr5 34723920 34724127 -168361405 + L2 LINE L2 2454 2668 -646 1130 213 79 50 chr5 34724128 34724546 -168360986 + MLT1J1 LTR MaLR 2 431 -15 469 324 53 6 chr5 34725330 34725500 -168360032 + MIR SINE MIR 25 202 -60 44731 39 1 2 chr5 34726087 34732196 -168353336 + L1PA3 LINE L1 53 6155 0 357 317 24 0 chr5 34732787 34732910 -168352622 - MIR3 SINE MIR -2 206 81 21 0 0 0 chr5 34736369 34736390 -168349142 + AT_rich Low_complexity Low_complexity 1 21 0 190 302 63 0 chr5 34737125 34737188 -168348344 + MIR SINE MIR 120 186 -76 205 205 0 0 chr5 34737266 34737305 -168348227 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2307 137 27 19 chr5 34737607 34737979 -168347553 - THE1C LTR MaLR 0 375 1 370 188 34 51 chr5 34738170 34738287 -168347245 + Charlie8 DNA MER1_type 77 191 -2226 2249 180 56 16 chr5 34739119 34739564 -168345968 + MLT1C LTR MaLR 1 463 -4 7130 101 6 1 chr5 34740286 34741279 -168344253 - L1MA1 LINE L1 -4 6298 5292 598 220 120 66 chr5 34741470 34741711 -168343821 + MIR SINE MIR 2 255 -7 374 238 26 22 chr5 34742032 34742199 -168343333 - MIR SINE MIR -13 249 54 390 57 0 0 chr5 34742459 34742512 -168343020 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 227 269 0 0 chr5 34742939 34742991 -168342541 - MIR SINE MIR -203 59 8 1856 140 11 0 chr5 34744892 34745156 -168340376 - AluJb SINE Alu -26 286 20 356 269 105 35 chr5 34746527 34746698 -168338834 + MIR SINE MIR 80 262 0 22 56 0 0 chr5 34747273 34747309 -168338223 + AT_rich Low_complexity Low_complexity 1 36 0 1082 241 103 41 chr5 34747740 34748060 -168337472 + MSTD LTR MaLR 1 340 -56 822 154 31 0 chr5 34748068 34748198 -168337334 - FLAM_C SINE Alu -8 135 2 515 83 28 0 chr5 34748202 34748274 -168337258 + MSTD LTR MaLR 323 396 0 258 32 0 0 chr5 34748505 34748536 -168336996 + (TG)n Simple_repeat Simple_repeat 1 31 0 893 151 0 123 chr5 34749145 34749357 -168336175 + MER20 DNA MER1_type 1 186 -33 2512 66 0 25 chr5 34749360 34749679 -168335853 + AluSp SINE Alu 1 311 -2 287 200 18 0 chr5 34749703 34749758 -168335774 + MER20 DNA MER1_type 164 219 0 23 86 0 0 chr5 34750062 34750120 -168335412 + AT_rich Low_complexity Low_complexity 1 58 0 31 26 0 0 chr5 34750372 34750410 -168335122 + AT_rich Low_complexity Low_complexity 1 38 0 1490 132 5 0 chr5 34750417 34750629 -168334903 + AluSx SINE Alu 2 214 -98 387 280 62 43 chr5 34750755 34750966 -168334566 + MIR SINE MIR 8 222 -40 2317 55 3 17 chr5 34750988 34751280 -168334252 + L1PA8 LINE L1 5882 6169 -3 1918 154 33 27 chr5 34751458 34751790 -168333742 + THE1B LTR MaLR 1 334 -30 341 232 42 21 chr5 34752692 34752787 -168332745 - MIR SINE MIR -61 201 105 220 244 188 38 chr5 34753064 34753224 -168332308 - MIR3 SINE MIR -13 195 12 1180 248 150 38 chr5 34754387 34754920 -168330612 + MLT1G LTR MaLR 1 588 -2 337 252 181 0 chr5 34755042 34755169 -168330363 + LTR33 LTR ERVL 1 150 -371 * 395 276 118 54 chr5 34755167 34755370 -168330162 + LTR33 LTR ERVL 304 519 -2 351 0 0 0 chr5 34756761 34756800 -168328732 + (TG)n Simple_repeat Simple_repeat 1 39 0 240 170 57 0 chr5 34757059 34757112 -168328420 + GA-rich Low_complexity Low_complexity 6 61 0 349 197 95 80 chr5 34757374 34757511 -168328021 + MIR SINE MIR 53 191 -71 522 188 97 49 chr5 34811882 34812026 -168273506 - MER31A LTR ERV1 -334 151 1 1641 167 52 0 chr5 34812047 34812317 -168273215 - AluSx SINE Alu -12 300 17 951 242 19 0 chr5 34812512 34812727 -168272805 - MER20 DNA MER1_type 0 219 1 2372 92 3 0 chr5 34812774 34813068 -168272464 - AluSp SINE Alu -13 300 6 1133 127 6 0 chr5 34813812 34813977 -168271555 - AluSg/x SINE Alu 0 312 147 826 161 112 45 chr5 34814090 34814332 -168271200 + Charlie5 DNA MER1_type 2328 2585 -27 202 205 0 0 chr5 34814733 34814772 -168270760 + GA-rich Low_complexity Low_complexity 2 40 0 2304 138 5 35 chr5 34814821 34815250 -168270282 + L1MB3 LINE L1 5759 6174 -9 2671 37 0 0 chr5 34815503 34815803 -168269729 + AluY SINE Alu 1 300 -11 199 373 73 9 chr5 34816740 34816850 -168268682 - L2 LINE L2 -19 3253 3137 2984 79 33 12 chr5 34816851 34817270 -168268262 + LTR10D LTR ERV1 1 428 -85 7504 64 1 0 chr5 34817560 34818597 -168266935 + L1PA7 LINE L1 5099 6154 0 6098 81 24 29 chr5 34818613 34819505 -168266027 + L1PA10 LINE L1 5281 6167 -1 649 343 58 38 chr5 34820132 34820584 -168264948 - L2 LINE L2 -12 3301 2841 213 323 138 8 chr5 34821604 34821734 -168263798 + MIR SINE MIR 2 148 -114 794 74 89 0 chr5 34822197 34822332 -168263200 + LTR10D LTR ERV1 367 513 0 1184 100 0 0 chr5 34823015 34823165 -168262367 + AluSx SINE Alu 4 153 -159 2435 99 0 0 chr5 34823231 34823543 -168261989 + AluSq SINE Alu 1 312 -1 1148 221 50 22 chr5 34823565 34823927 -168261605 + L1MD2 LINE L1 4787 5158 -988 625 197 59 20 chr5 34823950 34824102 -168261430 + L1MB7 LINE L1 6027 6184 0 * 5483 167 65 15 chr5 34824085 34825237 -168260295 + L1MD2 LINE L1 5159 6357 -2 2188 228 26 28 chr5 34827576 34828112 -168257420 - L1MA10 LINE L1 0 6334 5800 1343 148 29 6 chr5 34828114 34828552 -168256980 + LTR54 LTR ERV1 3 510 0 2933 194 50 2 chr5 34828552 34829398 -168256134 - L1MA10 LINE L1 -529 5805 4922 1615 132 92 4 chr5 34829394 34829621 -168255911 - L1PB1 LINE L1 -130 6021 5763 * 321 26 0 0 chr5 34829621 34829659 -168255873 + (TG)n Simple_repeat Simple_repeat 2 39 0 1615 132 92 4 chr5 34829659 34829712 -168255820 - L1PB1 LINE L1 -388 5763 5716 600 191 40 0 chr5 34829705 34829831 -168255701 - L1PB1 LINE L1 -814 5332 5202 * 1411 157 52 41 chr5 34829832 34829881 -168255651 + L1 LINE L1 4309 4356 -1790 2013 121 14 0 chr5 34829881 34830192 -168255340 + AluSx SINE Alu 1 315 0 1411 157 52 41 chr5 34830192 34830485 -168255047 + L1 LINE L1 4356 4656 -1490 3341 95 97 0 chr5 34830568 34831061 -168254471 - L1P LINE L1 -3513 2633 2093 * 6317 97 3 3 chr5 34831060 34831937 -168253595 + L1P LINE L1 3896 4772 -1374 1159 153 0 0 chr5 34832063 34832266 -168253266 + L1MA4 LINE L1 6094 6296 -4 1183 204 13 144 chr5 34832959 34833205 -168252327 + LTR37B LTR ERV1 9 151 -317 1742 197 44 33 chr5 34833205 34833566 -168251966 + MLT1A1 LTR MaLR 1 365 0 1183 204 13 144 chr5 34833566 34833848 -168251684 + LTR37B LTR ERV1 151 468 0 740 246 133 0 chr5 34834539 34834734 -168250798 - MIR SINE MIR -6 256 36 2330 160 6 9 chr5 34835461 34835799 -168249733 + MER1B DNA MER1_type 1 337 0 336 366 22 0 chr5 34836166 34836300 -168249232 - MIR SINE MIR -22 240 104 440 220 46 54 chr5 34836527 34836702 -168248830 + L1MC/D LINE L1 5517 5707 -514 264 30 0 0 chr5 34837471 34837504 -168248028 + (CA)n Simple_repeat Simple_repeat 1 33 0 2291 210 47 67 chr5 34837900 34838542 -168246990 + L1ME3A LINE L1 5506 6134 -36 559 297 54 5 chr5 34839551 34839736 -168245796 - MIR SINE MIR -27 235 42 225 394 14 7 chr5 34840692 34840834 -168244698 + MIR3 SINE MIR 2 144 -64 222 264 75 47 chr5 34841253 34841359 -168244173 + MIR SINE MIR 39 147 -115 1743 225 48 62 chr5 34841539 34841733 -168243799 + MER110 LTR ERV1 1 196 -295 2504 62 0 7 chr5 34841733 34842041 -168243491 - AluY SINE Alu -5 306 1 1743 225 48 62 chr5 34842041 34842344 -168243188 + MER110 LTR ERV1 196 491 0 715 283 11 11 chr5 34842956 34843136 -168242396 + MER5A DNA MER1_type 7 186 -3 389 269 81 42 chr5 34843136 34843295 -168242237 - MIR3 SINE MIR -22 186 14 1653 210 91 20 chr5 34843595 34844000 -168241532 - MER57B LTR ERV1 0 434 1 283 295 80 18 chr5 34844779 34844891 -168240641 + L2 LINE L2 2851 2969 -303 275 212 18 26 chr5 34846083 34846196 -168239336 + (TATATG)n Simple_repeat Simple_repeat 3 114 0 1262 264 20 7 chr5 34846345 34846648 -168238884 - MER93a LTR ERV1 -4 398 92 414 281 135 16 chr5 34847419 34847611 -168237921 + MIR SINE MIR 22 236 -26 1032 158 0 0 chr5 34847681 34847846 -168237686 - AluSg/x SINE Alu -8 302 138 559 246 14 14 chr5 34848439 34848581 -168236951 + MER117 DNA MER1_type 2 143 -54 262 316 21 11 chr5 34848599 34848694 -168236838 + MER117 DNA MER1_type 100 195 -2 390 243 102 83 chr5 34849236 34849669 -168235863 + L1ME4a LINE L1 5624 6064 -57 509 292 124 5 chr5 34849822 34850024 -168235508 + MIR SINE MIR 5 230 -32 307 284 120 33 chr5 34850315 34850498 -168235034 - MIR SINE MIR -51 211 13 423 0 0 0 chr5 34850498 34850545 -168234987 + (CA)n Simple_repeat Simple_repeat 2 48 0 289 215 0 15 chr5 34851616 34851681 -168233851 - MIR SINE MIR -112 150 87 796 186 14 0 chr5 34851717 34851857 -168233675 - MER5A DNA MER1_type -47 142 1 425 155 0 129 chr5 34851865 34851981 -168233551 - MER58 DNA MER1_type 0 2420 2320 499 237 10 0 chr5 34851995 34852092 -168233440 - MER58 DNA MER1_type -2321 99 2 2247 111 0 16 chr5 34852546 34852862 -168232670 - AluSx SINE Alu -1 311 1 992 249 26 52 chr5 34853805 34853889 -168231643 - MER46C DNA MER2_type -1 337 252 1289 123 24 24 chr5 34853889 34854100 -168231432 + L1MB2 LINE L1 5960 6170 -1 992 249 26 52 chr5 34854100 34854361 -168231171 - MER46C DNA MER2_type -86 252 1 195 198 119 119 chr5 34854399 34854500 -168231032 - MIR SINE MIR -110 152 52 283 158 13 13 chr5 34855755 34855831 -168229701 + (CA)n Simple_repeat Simple_repeat 1 76 0 187 364 78 0 chr5 34855880 34855957 -168229575 + L3 LINE CR1 1027 1109 -468 240 271 0 0 chr5 34855957 34856005 -168229527 + (TG)n Simple_repeat Simple_repeat 1 48 0 375 254 100 23 chr5 34856545 34856675 -168228857 - MIR3 SINE MIR -54 154 15 350 200 0 0 chr5 34856851 34856906 -168228626 - MER45C DNA AcHobo 0 953 899 * 772 297 102 27 chr5 34856901 34857194 -168228338 - MER45C DNA AcHobo -320 633 319 1230 289 11 8 chr5 34857203 34857570 -168227962 - MER45C DNA AcHobo -585 368 1 2004 179 40 5 chr5 34857687 34858062 -168227470 - MLT1B LTR MaLR 0 390 3 2256 72 0 0 chr5 34858137 34858402 -168227130 - AluSc SINE Alu -21 288 24 277 246 96 36 chr5 34858445 34858612 -168226920 + L2 LINE L2 3081 3257 -56 180 0 0 0 chr5 34858830 34858850 -168226682 + (A)n Simple_repeat Simple_repeat 1 20 0 213 397 0 0 chr5 34859105 34859183 -168226349 - L2 LINE L2 0 3272 3195 234 91 0 0 chr5 34859240 34859273 -168226259 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1088 227 138 37 chr5 34859293 34859721 -168225811 - L2 LINE L2 -34 3279 2809 345 82 0 0 chr5 34860185 34860234 -168225298 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 292 339 67 24 chr5 34860562 34860727 -168224805 - L2 LINE L2 -5 3267 3096 463 342 124 11 chr5 34860946 34861221 -168224311 - L2 LINE L2 -528 2786 2481 1384 194 23 48 chr5 34861307 34861617 -168223915 - AluJo SINE Alu -8 304 3 1386 215 20 81 chr5 34863164 34863573 -168221959 + MLT2C1 LTR ERVL 14 397 0 225 279 0 33 chr5 34863730 34863791 -168221741 + L1MEd LINE L1 427 485 -5634 519 294 119 44 chr5 34863827 34864237 -168221295 + L1ME3 LINE L1 5396 5839 -323 294 315 11 0 chr5 34864394 34864483 -168221049 + L2 LINE L2 3224 3313 0 190 300 27 120 chr5 34865848 34865998 -168219534 + MIR3 SINE MIR 67 202 -6 476 266 191 11 chr5 34868899 34869087 -168216445 + MIR SINE MIR 13 234 -28 381 276 138 0 chr5 34869552 34869704 -168215828 + MIR SINE MIR 78 250 -12 2036 96 0 57 chr5 34871061 34871391 -168214141 + AluSq SINE Alu 1 313 0 415 223 43 36 chr5 34871515 34871654 -168213878 - L1ME3A LINE L1 -102 6068 5929 1116 205 0 0 chr5 34873348 34873553 -168211979 + MER3 DNA MER1_type 1 205 -4 514 288 55 0 chr5 34874221 34874384 -168211148 + MIR SINE MIR 79 250 -12 522 253 159 43 chr5 34874424 34874657 -168210875 + MIR SINE MIR 1 260 -2 419 291 64 25 chr5 34875847 34876043 -168209489 + MIR SINE MIR 16 223 -39 436 290 49 16 chr5 34876449 34876632 -168208900 - MER5A DNA MER1_type 0 189 1 390 42 0 0 chr5 34877380 34877428 -168208104 + (TG)n Simple_repeat Simple_repeat 1 48 0 2247 112 3 13 chr5 34878411 34878725 -168206807 + AluSx SINE Alu 1 311 -1 2424 80 0 0 chr5 34878727 34879038 -168206494 + AluY SINE Alu 1 311 0 2004 183 129 5 chr5 34879619 34880068 -168205464 + MLT1D LTR MaLR 1 505 0 392 209 127 51 chr5 34880154 34880312 -168205220 + MER112 DNA MER1_type 20 189 -71 237 291 139 35 chr5 34880369 34880541 -168204991 + MIR SINE MIR 58 247 -15 978 296 52 19 chr5 34880664 34881029 -168204503 - L3 LINE CR1 -124 1453 1077 403 236 146 26 chr5 34881591 34881900 -168203632 - L1MC4 LINE L1 -1 8041 7696 1383 202 107 3 chr5 34882558 34882894 -168202638 + L1MC3 LINE L1 7065 7435 -350 934 241 14 21 chr5 34882900 34883186 -168202346 + L1MC3 LINE L1 7502 7785 0 669 273 152 29 chr5 34883380 34883860 -168201672 + L1ME4a LINE L1 5581 6119 -2 248 312 7 52 chr5 34884240 34884394 -168201138 + GA-rich Low_complexity Low_complexity 3 149 0 1142 177 83 133 chr5 34885334 34885814 -168199718 + MLT1D LTR MaLR 3 458 -47 304 294 24 48 chr5 34886288 34886414 -168199118 + MIR SINE MIR 82 204 -58 465 180 0 0 chr5 34887279 34887368 -168198164 + CT-rich Low_complexity Low_complexity 2 90 0 428 256 0 0 chr5 34887401 34887487 -168198045 - AluJ/FLAM SINE Alu -224 88 3 354 301 0 65 chr5 34887589 34887712 -168197820 + L2 LINE L2 3193 3307 -6 21 57 0 0 chr5 34888024 34888059 -168197473 + AT_rich Low_complexity Low_complexity 1 35 0 629 166 48 0 chr5 34888080 34888225 -168197307 + L1MB3 LINE L1 6014 6165 -18 1495 164 24 95 chr5 34888319 34888655 -168196877 - AluJo SINE Alu 0 312 1 348 121 0 30 chr5 34890529 34890595 -168194937 - MADE1 DNA Mariner -13 67 4 331 283 47 9 chr5 34890651 34890757 -168194775 - L2 LINE L2 0 3313 3204 184 237 0 0 chr5 34890806 34890844 -168194688 - L2 LINE L2 -220 3052 3015 561 216 68 68 chr5 34891169 34891433 -168194099 + LTR37B LTR ERV1 203 466 -2 517 205 7 93 chr5 34891465 34891616 -168193916 + MER5A DNA MER1_type 52 189 0 1034 209 36 8 chr5 34892017 34892266 -168193266 + L1MA9 LINE L1 1 256 -6774 755 161 109 6 chr5 34892266 34892440 -168193092 + MLT1A1 LTR MaLR 1 192 -173 12789 175 33 15 chr5 34892444 34895683 -168189849 + L1MA9 LINE L1 3316 6634 -638 2390 103 3 0 chr5 34895683 34895984 -168189548 - AluSq SINE Alu -11 302 1 12789 175 33 15 chr5 34895984 34896629 -168188903 + L1MA9 LINE L1 6634 7266 -6 230 283 8 0 chr5 34897660 34897780 -168187752 + (TA)n Simple_repeat Simple_repeat 2 122 0 374 293 173 7 chr5 34897845 34897995 -168187537 - MER5A DNA MER1_type -1 188 14 2299 19 19 0 chr5 34898197 34898465 -168187067 - L1PA3 LINE L1 -3 6152 5880 348 329 39 13 chr5 34898582 34898737 -168186795 + L1MEc LINE L1 1806 1964 -4432 7809 248 56 13 chr5 34898755 34901939 -168183593 + L1MEc LINE L1 2048 5334 -881 258 176 0 0 chr5 34901939 34901990 -168183542 + (TG)n Simple_repeat Simple_repeat 1 51 0 2860 242 52 4 chr5 34902005 34902830 -168182702 + L1MB8 LINE L1 5313 6177 -1 189 219 0 0 chr5 34902931 34902963 -168182569 + MER5B DNA MER1_type 18 49 -129 288 304 49 10 chr5 34904376 34904478 -168181054 - L2 LINE L2 -14 3258 3153 253 171 14 14 chr5 34904895 34904965 -168180567 + GA-rich Low_complexity Low_complexity 5 74 0 410 264 83 47 chr5 34906417 34906770 -168178762 - L1MC5 LINE L1 -184 7777 7403 2414 83 0 13 chr5 34906770 34907083 -168178449 + AluSc SINE Alu 1 309 0 410 264 83 47 chr5 34907083 34907172 -168178360 - L1MC5 LINE L1 -558 7403 7319 285 109 0 0 chr5 34907280 34907326 -168178206 + (TA)n Simple_repeat Simple_repeat 2 47 0 235 289 35 28 chr5 34907366 34907508 -168178024 - L1MC4 LINE L1 -574 7468 7326 375 291 199 7 chr5 34907752 34907903 -168177629 + MIR3 SINE MIR 13 192 -16 2165 127 7 0 chr5 34908493 34908793 -168176739 - AluSx SINE Alu -10 302 1 425 272 53 18 chr5 34909260 34909374 -168176158 - MER91A DNA MER1_type -70 126 9 1660 264 67 10 chr5 34910182 34910874 -168174658 - L1PBa LINE L1 -6052 811 81 25 31 0 0 chr5 34911452 34911484 -168174048 + AT_rich Low_complexity Low_complexity 1 32 0 291 340 37 6 chr5 34913028 34913190 -168172342 + MLT1I LTR MaLR 40 206 -203 181 216 108 14 chr5 34914137 34914211 -168171321 + MIR SINE MIR 125 205 -57 1833 153 66 34 chr5 34914713 34914932 -168170600 - MLT1B LTR MaLR 0 390 153 2337 105 3 0 chr5 34914932 34915236 -168170296 - AluSx SINE Alu -6 306 2 1833 153 66 34 chr5 34915236 34915394 -168170138 - MLT1B LTR MaLR -237 153 1 195 285 66 73 chr5 34916042 34916193 -168169339 + MIR SINE MIR 102 251 -11 357 253 11 0 chr5 34917233 34917320 -168168212 - MER63 DNA MER1_type 0 1061 974 1551 209 112 38 chr5 34917336 34917782 -168167750 + MLT1D LTR MaLR 27 505 0 604 134 52 0 chr5 34917782 34917877 -168167655 - MER63 DNA MER1_type -84 752 27 201 226 0 0 chr5 34917931 34917984 -168167548 + (ATATG)n Simple_repeat Simple_repeat 1 53 0 251 292 97 0 chr5 34918126 34918198 -168167334 - L2 LINE L2 0 3272 3194 2320 155 14 11 chr5 34918388 34918750 -168166782 + MLT1A1 LTR MaLR 1 363 -2 284 310 50 0 chr5 34919388 34919488 -168166044 - L2 LINE L2 0 3272 3168 2647 101 28 8 chr5 34920091 34920448 -168165084 - THE1B LTR MaLR 0 364 1 430 331 21 7 chr5 34920473 34920615 -168164917 + MIR SINE MIR 60 203 -59 336 227 39 70 chr5 34920931 34921059 -168164473 + MLT1H LTR MaLR 396 519 -30 25 31 0 0 chr5 34921759 34921791 -168163741 + AT_rich Low_complexity Low_complexity 1 32 0 970 179 12 30 chr5 34922241 34922409 -168163123 + FRAM SINE Alu 1 165 -1 22 35 0 0 chr5 34922571 34922600 -168162932 + AT_rich Low_complexity Low_complexity 1 29 0 487 331 105 26 chr5 34923296 34923716 -168161816 + L2 LINE L2 2510 2962 -352 282 254 0 0 chr5 34923722 34923781 -168161751 - MIR SINE MIR -64 144 86 771 278 31 18 chr5 34923841 34924064 -168161468 + MIR SINE MIR 23 248 -14 185 244 0 0 chr5 34924032 34924073 -168161459 + L2 LINE L2 3262 3302 -11 * 770 190 40 35 chr5 34924785 34924959 -168160573 + MER5B DNA MER1_type 1 175 -3 465 224 41 41 chr5 34925082 34925252 -168160280 - MER112 DNA MER1_type -90 170 1 364 317 34 14 chr5 34925252 34925407 -168160125 - MIR3 SINE MIR -48 160 1 497 197 180 0 chr5 34925641 34925795 -168159737 - MER5A DNA MER1_type 0 189 4 346 253 142 12 chr5 34925954 34926116 -168159416 - L1MEc LINE L1 -4925 1471 1289 362 241 190 55 chr5 34926118 34926355 -168159177 - L2 LINE L2 -101 3212 2944 1386 273 92 34 chr5 34927749 34928498 -168157034 - L2 LINE L2 -100 3213 2404 1704 173 3 14 chr5 34928498 34928787 -168156745 + AluJo SINE Alu 6 291 -21 1386 273 92 34 chr5 34928787 34928863 -168156669 - L2 LINE L2 -909 2404 2334 1711 268 24 16 chr5 34928878 34929378 -168156154 - L1ME3A LINE L1 -28 6142 5639 238 280 13 27 chr5 34929408 34929483 -168156049 + MLT1G1 LTR MaLR 248 321 -274 352 238 0 0 chr5 34929483 34929563 -168155969 + L1ME3A LINE L1 5881 5960 -210 670 227 39 84 chr5 34929621 34929907 -168155625 - L1ME3A LINE L1 -580 5584 5312 1420 248 109 80 chr5 34929912 34930450 -168155082 + MLT1G1 LTR MaLR 1 593 -2 1026 276 105 26 chr5 34930457 34930925 -168154607 - L1ME3A LINE L1 -840 5306 4802 1247 266 126 65 chr5 34930925 34931617 -168153915 - L2 LINE L2 -965 2349 1616 1314 223 33 50 chr5 34931717 34932081 -168153451 + MLT1A2 LTR MaLR 1 358 -16 1311 153 27 110 chr5 34932688 34933061 -168152471 - L1MA7 LINE L1 -22 6269 5928 1147 186 30 60 chr5 34933962 34934295 -168151237 - L1MC5 LINE L1 -30 7931 7609 255 229 0 14 chr5 34934326 34934396 -168151136 - L1MC/D LINE L1 -1911 5897 5829 4014 190 48 33 chr5 34934483 34936187 -168149345 - L1MA9 LINE L1 -30 6282 4547 396 331 41 0 chr5 34936543 34936664 -168148868 + MIR3 SINE MIR 66 191 -17 3252 96 20 0 chr5 34937181 34937619 -168147913 + L1PA13 LINE L1 5710 6156 -7 484 291 114 41 chr5 34937695 34938135 -168147397 - L1ME4a LINE L1 -171 5950 5479 363 248 203 33 chr5 34938832 34938985 -168146547 + MIR3 SINE MIR 15 193 -15 26 0 0 0 chr5 34939215 34939241 -168146291 + AT_rich Low_complexity Low_complexity 1 26 0 1854 162 6 16 chr5 34939294 34939609 -168145923 + AluJo SINE Alu 1 312 0 301 148 19 0 chr5 34939712 34939766 -168145766 - Charlie8 DNA MER1_type -992 1425 1371 327 237 65 36 chr5 34939772 34939911 -168145621 - Charlie8 DNA MER1_type -1897 520 378 641 165 23 38 chr5 34940397 34940530 -168145002 + L1MA9 LINE L1 6182 6312 0 577 251 186 65 chr5 34941200 34941586 -168143946 + MLT1J2 LTR MaLR 1 433 -17 24 53 0 0 chr5 34942841 34942879 -168142653 + AT_rich Low_complexity Low_complexity 1 38 0 216 200 0 0 chr5 34942933 34942983 -168142549 + (TATG)n Simple_repeat Simple_repeat 1 50 0 311 285 62 62 chr5 34942983 34943127 -168142405 + L1MC4 LINE L1 6595 6738 -1304 410 215 30 22 chr5 34943919 34944020 -168141512 + MIR SINE MIR 93 189 -65 1048 209 52 14 chr5 34944033 34944244 -168141288 + MER58A DNA MER1_type 6 224 0 2046 228 82 37 chr5 34945489 34946085 -168139447 + MLT1E3 LTR MaLR 1 623 -1 405 0 0 0 chr5 34946221 34946266 -168139266 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 687 305 109 28 chr5 34946370 34946923 -168138609 - L1ME LINE L1 -314 5856 5254 378 311 55 19 chr5 34946964 34947221 -168138311 - L1ME LINE L1 -978 5168 4903 1799 162 0 11 chr5 34949008 34949292 -168136240 + AluJo SINE Alu 1 281 -31 670 261 72 9 chr5 34949670 34949892 -168135640 - MIR SINE MIR -26 236 1 225 232 42 74 chr5 34950747 34950842 -168134690 + MIR SINE MIR 60 151 -57 558 251 162 22 chr5 34952218 34952406 -168133126 + L1ME4a LINE L1 5761 5921 -200 2009 132 53 71 chr5 34952406 34952800 -168132732 - MLT1B LTR MaLR -3 387 1 558 251 162 22 chr5 34952800 34952926 -168132606 + L1ME4a LINE L1 5921 6119 -2 431 259 193 0 chr5 34953531 34953719 -168131813 - MIR SINE MIR -21 241 20 200 180 180 33 chr5 34953714 34953775 -168131757 + L2 LINE L2 3144 3213 -59 * 293 317 32 32 chr5 34953877 34953912 -168131620 - MIR SINE MIR -76 186 152 2339 168 6 3 chr5 34953912 34954276 -168131256 - MLT1A1 LTR MaLR 0 365 1 293 317 32 32 chr5 34954276 34954363 -168131169 - MIR SINE MIR -109 153 64 279 0 0 0 chr5 34954418 34954449 -168131083 + (TC)n Simple_repeat Simple_repeat 2 32 0 201 300 98 71 chr5 34955207 34955399 -168130133 - L2 LINE L2 -337 2977 2771 867 173 0 0 chr5 34955399 34955532 -168130000 - FLAM_C SINE Alu 0 133 1 201 300 98 71 chr5 34955532 34955676 -168129856 - L2 LINE L2 -543 2771 2632 367 93 0 0 chr5 34955724 34955778 -168129754 + MADE1 DNA Mariner 27 80 0 2120 133 3 0 chr5 34956886 34957186 -168128346 + AluSx SINE Alu 1 301 -11 255 261 8 50 chr5 34957197 34957316 -168128216 + GA-rich Low_complexity Low_complexity 5 118 0 195 245 151 65 chr5 34957444 34957583 -168127949 + MIR3 SINE MIR 49 199 -9 373 309 111 0 chr5 34957594 34957756 -168127776 + MIR SINE MIR 2 181 -81 668 270 50 5 chr5 34958883 34959105 -168126427 + MIR SINE MIR 6 237 -25 184 200 0 25 chr5 34959073 34959113 -168126419 + L2 LINE L2 3251 3289 -24 * 974 70 78 0 chr5 34960031 34960160 -168125372 - MER85 DNA T2_type 0 139 1 343 281 86 16 chr5 34962017 34962145 -168123387 + L1MD3 LINE L1 6444 6580 -1415 970 201 142 46 chr5 34962146 34962383 -168123149 - Tigger7 DNA MER2_type 0 2491 2278 8350 77 21 9 chr5 34962383 34963442 -168122090 + MER11C LTR ERVK 1 1071 0 970 201 142 46 chr5 34963442 34963535 -168121997 - Tigger7 DNA MER2_type -213 2278 3 1440 206 48 93 chr5 34963538 34964062 -168121470 + L1MC4 LINE L1 6590 7089 -953 886 240 31 9 chr5 34964067 34964292 -168121240 + L1MC4a LINE L1 7163 7392 -416 1023 179 113 69 chr5 34964303 34964577 -168120955 - MSTB1 LTR MaLR -146 286 1 862 179 7 0 chr5 34964579 34964730 -168120802 + L1MC4 LINE L1 7475 7626 -416 192 300 33 17 chr5 34964954 34965014 -168120518 + L2 LINE L2 2995 3055 -217 2483 83 0 0 chr5 34965827 34966139 -168119393 + AluSp SINE Alu 1 312 -1 2061 134 0 10 chr5 34966419 34966717 -168118815 + AluSx SINE Alu 1 295 -17 195 244 44 0 chr5 34967327 34967372 -168118160 - MER5B DNA MER1_type -3 175 129 419 223 10 10 chr5 34967468 34967773 -168117759 + (TA)n Simple_repeat Simple_repeat 1 305 0 261 170 38 38 chr5 34967828 34967987 -168117545 + (TATATG)n Simple_repeat Simple_repeat 4 162 0 430 251 37 0 chr5 34968019 34968249 -168117283 + (TA)n Simple_repeat Simple_repeat 1 238 0 425 235 22 22 chr5 34968288 34968576 -168116956 + (TA)n Simple_repeat Simple_repeat 1 288 0 194 216 54 0 chr5 34969422 34969459 -168116073 - MIR SINE MIR -87 121 83 259 364 33 16 chr5 34969560 34969681 -168115851 - MIR SINE MIR -61 147 25 2392 101 0 0 chr5 34969757 34970065 -168115467 + AluY SINE Alu 1 308 -3 213 294 0 0 chr5 34970493 34970544 -168114988 + (CA)n Simple_repeat Simple_repeat 1 51 0 180 0 0 0 chr5 34970724 34970744 -168114788 + (CAA)n Simple_repeat Simple_repeat 2 21 0 564 262 168 0 chr5 34972392 34972541 -168112991 - MER5A DNA MER1_type 0 189 16 286 317 73 0 chr5 34972565 34972647 -168112885 - MIR SINE MIR -87 121 34 1382 203 59 17 chr5 34974346 34974519 -168111013 - AluJo SINE Alu -9 303 112 189 0 0 0 chr5 34974519 34974540 -168110992 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1382 203 59 17 chr5 34974540 34974656 -168110876 - AluJo SINE Alu -200 112 2 762 163 0 71 chr5 34975106 34975247 -168110285 + FLAM_C SINE Alu 7 137 -6 5242 163 10 29 chr5 34975248 34976217 -168109315 + L1MA9 LINE L1 5361 6311 -1 2090 230 72 23 chr5 34976338 34976994 -168108538 + L1M4 LINE L1 2346 3033 -3113 1794 187 0 3 chr5 34977002 34977312 -168108220 + AluJo SINE Alu 3 311 -1 13153 113 8 16 chr5 34977339 34980460 -168105072 + L1PA7 LINE L1 6 3114 -3347 2648 91 0 0 chr5 35030483 35030836 -168054696 + L1PA7 LINE L1 5034 5386 -1075 7115 55 6 8 chr5 35030836 35031707 -168053825 + L1PA7 LINE L1 5598 6469 0 8425 169 22 14 chr5 35031710 35034325 -168051207 + L1PB3 LINE L1 3521 6152 -2 224 29 0 29 chr5 35034326 35034360 -168051172 + (CA)n Simple_repeat Simple_repeat 2 34 0 227 266 9 18 chr5 35034393 35034502 -168051030 - L1M4 LINE L1 -3476 2670 2563 2278 137 134 11 chr5 35034527 35034908 -168050624 + MSTA LTR MaLR 1 428 0 5976 180 23 28 chr5 35034908 35035401 -168050131 + MSTA-int LTR MaLR 1 495 -1156 1162 146 151 0 chr5 35035401 35035600 -168049932 - MER30 DNA MER1_type 0 230 2 5976 180 23 28 chr5 35035600 35036216 -168049316 + MSTA-int LTR MaLR 495 1105 -546 5522 115 44 26 chr5 35036216 35037217 -168048315 - MER11B LTR ERVK -88 1148 1 659 140 9 9 chr5 35037225 35037339 -168048193 + MSTA-int LTR MaLR 1538 1651 0 2309 154 115 5 chr5 35037339 35037723 -168047809 + MSTA LTR MaLR 1 426 -2 1914 214 21 32 chr5 35037749 35038276 -168047256 + L1M4 LINE L1 3333 3853 -2293 4848 234 37 49 chr5 35038287 35038521 -168047011 + L1MC1 LINE L1 3077 3312 -3021 285 196 0 0 chr5 35038521 35038572 -168046960 + MSTA LTR MaLR 371 421 -7 4848 234 37 49 chr5 35038572 35038974 -168046558 + L1MC1 LINE L1 3312 3717 -2616 2401 96 0 10 chr5 35038974 35039287 -168046245 + AluSg SINE Alu 1 310 0 4848 234 37 49 chr5 35039287 35041538 -168043994 + L1MC1 LINE L1 3717 5846 -487 2003 129 0 0 chr5 35041545 35041816 -168043716 + AluSc SINE Alu 1 271 -38 2607 150 33 7 chr5 35041916 35042342 -168043190 + L1MC1 LINE L1 5897 6333 0 3763 219 61 58 chr5 35042342 35043522 -168042010 + L1M4 LINE L1 3843 5025 -1121 1290 185 20 16 chr5 35043527 35043776 -168041756 + L1MD1 LINE L1 5993 6242 0 243 150 62 113 chr5 35045430 35045510 -168040022 - MER5B DNA MER1_type 0 178 103 622 269 0 28 chr5 35045533 35045715 -168039817 + MER5B DNA MER1_type 1 177 -1 540 227 0 133 chr5 35045724 35045785 -168039747 - MER5A DNA MER1_type 0 189 122 1165 191 30 4 chr5 35045785 35046015 -168039517 + L1MB8 LINE L1 5933 6168 -10 540 227 0 133 chr5 35046015 35046156 -168039376 - MER5A DNA MER1_type -67 122 14 989 245 19 5 chr5 35047187 35047403 -168038129 - MER58A DNA MER1_type -5 219 1 474 193 12 0 chr5 35047403 35047486 -168038046 - MIR SINE MIR -91 171 88 312 319 98 34 chr5 35048355 35048621 -168036911 - L2 LINE L2 -2343 971 689 363 228 52 7 chr5 35048738 35048874 -168036658 + GA-rich Low_complexity Low_complexity 3 144 0 1713 191 84 31 chr5 35049031 35049449 -168036083 + MLT1D LTR MaLR 61 500 -5 309 288 147 40 chr5 35051705 35051882 -168033650 - MIR SINE MIR -62 200 5 255 189 0 0 chr5 35051894 35051947 -168033585 + (CA)n Simple_repeat Simple_repeat 2 54 0 2120 123 3 0 chr5 35052665 35052958 -168032574 - AluSx SINE Alu -18 294 1 833 177 0 15 chr5 35053332 35053462 -168032070 - FLAM_C SINE Alu -14 129 2 193 269 51 39 chr5 35053565 35053643 -168031889 + L3 LINE CR1 1484 1562 -15 767 90 0 0 chr5 35054468 35054568 -168030964 + U6 snRNA snRNA 2 101 -6 1991 110 38 10 chr5 35054586 35054876 -168030656 + AluSx SINE Alu 1 298 -14 405 308 7 20 chr5 35055669 35055815 -168029717 - MIR SINE MIR 0 262 119 419 256 108 0 chr5 35056209 35056338 -168029194 + MIR SINE MIR 120 262 0 789 103 0 0 chr5 35057131 35057238 -168028294 - AluY SINE Alu 0 311 205 240 143 0 0 chr5 35059275 35059331 -168026201 + (A)n Simple_repeat Simple_repeat 1 56 0 1957 103 4 8 chr5 35059773 35060066 -168025466 + AluSp SINE Alu 38 313 0 2006 127 0 36 chr5 35060753 35061061 -168024471 + AluSp SINE Alu 1 297 -16 734 294 20 0 chr5 35061692 35061893 -168023639 - MIR SINE MIR 0 262 58 2439 264 124 25 chr5 35063103 35064285 -168021247 - L2 LINE L2 -4 3309 2004 1564 161 29 127 chr5 35064796 35065182 -168020350 - Tigger3(Golem) DNA MER2_type 0 3029 1 1033 250 66 28 chr5 35065214 35065606 -168019926 - L1ME1 LINE L1 -5 6161 5755 1818 170 0 20 chr5 35065813 35066113 -168019419 + AluJo SINE Alu 1 294 -18 1670 179 24 14 chr5 35067519 35067816 -168017716 + AluJb SINE Alu 1 300 -12 907 153 0 15 chr5 35067835 35067972 -168017560 + AluJo SINE Alu 1 135 -177 4092 256 55 47 chr5 35068179 35069812 -168015720 + L1ME2 LINE L1 36 1681 -4715 4466 198 100 8 chr5 35069840 35071034 -168014498 - L1PBa LINE L1 -5410 1453 6 605 251 29 6 chr5 35071039 35071210 -168014322 + L1ME2 LINE L1 4899 5073 -1142 2206 129 0 0 chr5 35071211 35071513 -168014019 + AluSq SINE Alu 1 302 -11 2639 198 34 17 chr5 35071685 35071795 -168013737 + L1ME2 LINE L1 5162 5269 -966 2331 121 0 0 chr5 35071795 35072102 -168013430 + AluSg SINE Alu 1 307 -3 195 42 0 0 chr5 35072102 35072126 -168013406 + (GGGGA)n Simple_repeat Simple_repeat 5 28 0 2639 198 34 17 chr5 35072126 35072742 -168012790 + L1ME2 LINE L1 5268 5895 -340 4310 82 29 42 chr5 35072742 35073784 -168011748 + MER11A LTR ERVK 1 1266 0 400 219 79 112 chr5 35073788 35074003 -168011529 + L1ME2 LINE L1 5903 6110 -123 691 125 0 0 chr5 35074283 35074387 -168011145 - L1M2 LINE L1 -866 5434 5331 3660 159 16 22 chr5 35074388 35075073 -168010459 + L1MA8 LINE L1 5609 6289 -2 453 305 20 13 chr5 35075415 35075566 -168009966 + MER5B DNA MER1_type 1 152 -26 939 182 39 0 chr5 35075868 35076049 -168009483 - MER5A DNA MER1_type 0 189 2 1543 266 23 10 chr5 35077605 35078090 -168007442 - L1M4 LINE L1 -3000 3146 2656 238 195 171 12 chr5 35078281 35078363 -168007169 + MLT1F1 LTR MaLR 1 95 -559 1133 257 169 38 chr5 35078374 35078818 -168006714 + MLT1F1 LTR MaLR 66 567 0 279 348 66 23 chr5 35078827 35079160 -168006372 - L2 LINE L2 -743 2571 2163 220 298 48 0 chr5 35079094 35079178 -168006354 + MIR SINE MIR 134 221 -41 * 1225 235 35 65 chr5 35079194 35079442 -168006090 + MLT1B LTR MaLR 1 234 -156 2630 153 19 0 chr5 35079442 35079860 -168005672 - MSTB LTR MaLR 0 426 1 1225 235 35 65 chr5 35079860 35080011 -168005521 + MLT1B LTR MaLR 234 388 -2 4310 100 5 8 chr5 35080685 35081303 -168004229 - L1PB1 LINE L1 0 6151 5536 458 228 14 35 chr5 35081337 35081482 -168004050 - L1 LINE L1 -2593 4269 4128 3299 149 33 4 chr5 35081584 35082405 -168003127 - L1PA7 LINE L1 -271 5883 2986 2524 125 11 3 chr5 35082406 35082767 -168002765 + THE1B LTR MaLR 1 364 0 2036 77 4 7 chr5 35082767 35083040 -168002492 + THE1B-int LTR MaLR 1 272 -1308 2211 68 0 0 chr5 35083052 35083331 -168002201 + THE1B-int LTR MaLR 1302 1580 0 2597 100 14 8 chr5 35083333 35083693 -168001839 + THE1B LTR MaLR 3 364 0 16010 130 47 46 chr5 35083693 35087393 -167998139 - L1PBa LINE L1 -3157 3705 1 257 35 0 0 chr5 35088340 35088369 -167997163 + U2 snRNA snRNA 5 33 -155 639 333 87 30 chr5 35088783 35089233 -167996299 + L2 LINE L2 2248 2734 -580 1372 284 30 40 chr5 35089233 35089729 -167995803 - LTR16C LTR ERVL 0 491 1 639 333 87 30 chr5 35089729 35089807 -167995725 + L2 LINE L2 2734 2806 -508 799 294 8 32 chr5 35090012 35090260 -167995272 - MLT2F LTR ERVL -234 429 188 4323 287 59 24 chr5 35090300 35091850 -167993682 - ERVL LTR ERVL -3385 2379 775 859 276 105 20 chr5 35091857 35092296 -167993236 + HAL1 LINE L1 1933 2408 -99 279 256 60 17 chr5 35092308 35092425 -167993107 - MER5B DNA MER1_type -37 141 20 21 0 0 0 chr5 35092459 35092480 -167993052 + AT_rich Low_complexity Low_complexity 1 21 0 2283 112 3 3 chr5 35092851 35093163 -167992369 - AluSx SINE Alu 0 312 1 215 320 83 51 chr5 35093172 35093328 -167992204 - L2 LINE L2 -210 3062 2902 2191 100 0 0 chr5 35093414 35093747 -167991785 + AluSg SINE Alu 1 333 0 2105 116 3 7 chr5 35094041 35094335 -167991197 + AluSc SINE Alu 1 293 -16 3226 173 18 71 chr5 35094509 35095239 -167990293 - LTR8 LTR ERV1 0 691 1 335 316 30 42 chr5 35095470 35095638 -167989894 - MER5A DNA MER1_type 0 189 24 226 200 0 0 chr5 35095665 35095705 -167989827 - MIR SINE MIR -56 152 113 4905 73 26 3 chr5 35095710 35096355 -167989177 - PABL_A LTR ERV1 0 660 1 849 159 49 102 chr5 35097133 35097359 -167988173 + MER20 DNA MER1_type 1 214 -5 263 247 71 91 chr5 35097675 35097829 -167987703 + L2 LINE L2 1873 2023 -1291 506 156 89 0 chr5 35097831 35097921 -167987611 + MER4A LTR ERV1 1 98 -566 1827 117 11 80 chr5 35097921 35098295 -167987237 + MER4A LTR ERV1 261 664 0 675 326 138 26 chr5 35098454 35099196 -167986336 + L2 LINE L2 2153 2977 -337 2032 158 0 0 chr5 35099508 35099806 -167985726 - AluSx SINE Alu -14 298 1 208 321 0 0 chr5 35099860 35099913 -167985619 + L2 LINE L2 3196 3248 -24 898 250 10 0 chr5 35099993 35100193 -167985339 - MLT1D LTR MaLR -5 500 299 399 190 30 80 chr5 35100189 35100289 -167985243 - MLT1D LTR MaLR -409 96 2 * 183 366 141 0 chr5 35100354 35100496 -167985036 + MIR3 SINE MIR 19 180 -28 810 108 7 20 chr5 35101640 35101788 -167983744 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 22 35 0 0 chr5 35104722 35104751 -167980781 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 35105929 35105954 -167979578 + AT_rich Low_complexity Low_complexity 1 25 0 262 332 62 62 chr5 35107356 35107600 -167977932 - L2 LINE L2 -10 3262 3019 180 0 0 0 chr5 35107983 35108003 -167977529 + (TG)n Simple_repeat Simple_repeat 1 20 0 777 306 74 46 chr5 35109076 35109511 -167976021 + MER115 DNA AcHobo 4 450 -243 540 250 172 16 chr5 35109568 35109760 -167975772 + MIR SINE MIR 35 256 -6 1703 187 0 10 chr5 35109780 35110074 -167975458 - AluJb SINE Alu -18 294 4 296 271 187 13 chr5 35110092 35110247 -167975285 - MIR SINE MIR -75 187 6 200 221 94 102 chr5 35110252 35110379 -167975153 + L3 LINE CR1 1155 1280 -297 2367 97 0 0 chr5 35110878 35111176 -167974356 + AluY SINE Alu 1 298 -13 734 214 91 16 chr5 35111614 35111801 -167973731 - MER58B DNA MER1_type -4 337 137 716 169 14 14 chr5 35111827 35111969 -167973563 - MER58B DNA MER1_type -163 178 37 247 284 135 34 chr5 35112311 35112459 -167973073 - MIR SINE MIR 0 262 100 304 270 143 36 chr5 35112459 35112655 -167972877 + L1MC4a LINE L1 5851 6067 -1741 242 258 0 2 chr5 35112741 35112810 -167972722 - MIR SINE MIR -102 106 40 182 313 45 0 chr5 35113535 35113602 -167971930 + MIR SINE MIR 82 151 -111 180 0 0 0 chr5 35113659 35113679 -167971853 + (GGCTG)n Simple_repeat Simple_repeat 5 24 0 425 295 26 47 chr5 35114663 35114856 -167970676 + MIR SINE MIR 60 248 -14 291 278 21 62 chr5 35116045 35116189 -167969343 - L2 LINE L2 -236 3036 2899 1634 184 23 29 chr5 35116588 35116897 -167968635 + AluJo SINE Alu 1 307 -5 180 246 49 16 chr5 35116939 35117000 -167968532 + MIR3 SINE MIR 141 203 -5 298 270 34 11 chr5 35117800 35117889 -167967643 - L3 LINE CR1 -810 767 677 215 287 58 11 chr5 35118703 35118790 -167966742 + L2 LINE L2 2945 3035 -237 698 221 13 19 chr5 35118814 35118972 -167966560 - FRAM SINE Alu -19 157 1 7437 8 0 1 chr5 35119375 35120196 -167965336 - L1HS LINE L1 0 6155 5336 5257 32 0 0 chr5 35120195 35120819 -167964713 + L1P LINE L1 1941 2564 -3582 * 2530 186 84 55 chr5 35121576 35122182 -167963350 + MLT1E2 LTR MaLR 3 626 0 273 29 0 0 chr5 35122325 35122359 -167963173 + (CA)n Simple_repeat Simple_repeat 2 35 0 8869 121 8 5 chr5 35122359 35123651 -167961881 + HSMAR2 DNA Mariner 6 1301 -1 797 253 0 0 chr5 35125188 35125358 -167960174 - FRAM SINE Alu -1 175 6 322 279 241 19 chr5 35125757 35126019 -167959513 - L1ME4a LINE L1 -28 6093 5774 296 65 152 0 chr5 35126737 35126783 -167958749 + L1MC3 LINE L1 7519 7571 -214 * 1143 110 58 0 chr5 35126781 35126954 -167958578 - L1P5 LINE L1 -507 5644 5462 753 141 16 0 chr5 35126968 35127089 -167958443 - L1PB1 LINE L1 -360 5791 5669 748 92 5 118 chr5 35127081 35127276 -167958256 + L1PB1 LINE L1 5784 5956 -195 * 801 165 24 58 chr5 35127562 35127768 -167957764 + L1MD3 LINE L1 7765 7963 -32 207 286 143 0 chr5 35127822 35127920 -167957612 + L2 LINE L2 3201 3312 -1 260 322 98 53 chr5 35128290 35128462 -167957070 + L2 LINE L2 2935 3098 -174 1573 254 18 78 chr5 35128462 35128951 -167956581 + LTR16B LTR ERVL 5 464 0 260 322 98 53 chr5 35128951 35129137 -167956395 + L2 LINE L2 3098 3270 -2 272 256 206 38 chr5 35129386 35129546 -167955986 - MIR SINE MIR -24 238 52 898 226 51 0 chr5 35129746 35129941 -167955591 + MER3 DNA MER1_type 1 205 -4 392 239 263 34 chr5 35130941 35131146 -167954386 + MIR SINE MIR 2 253 -9 385 174 20 92 chr5 35132610 35132708 -167952824 - MER20 DNA MER1_type -128 91 1 1549 12 0 0 chr5 35133218 35133387 -167952145 - AluYb8 SINE Alu -4 314 146 518 261 150 7 chr5 35134151 35134304 -167951228 - MER5A DNA MER1_type -6 183 9 297 0 0 0 chr5 35134576 35134609 -167950923 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 0 0 0 chr5 35135825 35135847 -167949685 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 360 0 0 0 chr5 35135846 35135886 -167949646 + (TG)n Simple_repeat Simple_repeat 1 40 0 415 284 18 0 chr5 35135899 35136008 -167949524 - L2 LINE L2 0 3313 3203 35 0 0 0 chr5 35136064 35136099 -167949433 + AT_rich Low_complexity Low_complexity 1 35 0 309 333 37 0 chr5 35137204 35137312 -167948220 + LTR16C LTR ERVL 376 487 -4 399 113 0 0 chr5 35137328 35137390 -167948142 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 370 266 9 37 chr5 35137395 35137504 -167948028 + MIR3 SINE MIR 61 166 -42 * 433 291 34 27 chr5 35137495 35137643 -167947889 - L2 LINE L2 -4 3309 3161 1346 150 89 112 chr5 35138225 35138421 -167947111 - AluJb SINE Alu -5 307 119 2166 128 3 0 chr5 35138421 35138718 -167946814 - AluSx SINE Alu -12 300 3 1346 150 89 112 chr5 35138718 35138835 -167946697 - AluJb SINE Alu -193 119 1 228 311 0 0 chr5 35142441 35142502 -167943030 + MLT1L LTR MaLR 19 79 -536 271 339 63 24 chr5 35142558 35142685 -167942847 + MLT1L LTR MaLR 198 329 -286 280 189 84 42 chr5 35142853 35142948 -167942584 + MLT1J LTR MaLR 405 503 -8 1533 208 53 45 chr5 35143723 35144103 -167941429 + MLT1B LTR MaLR 3 385 -5 296 264 57 28 chr5 35144430 35144536 -167940996 - L2 LINE L2 -1 3312 3204 300 365 33 40 chr5 35144557 35144813 -167940719 - L2 LINE L2 -439 2875 2620 5660 129 48 9 chr5 35144813 35145682 -167939850 + MER4D LTR ERV1 1 903 0 300 365 33 40 chr5 35145682 35145729 -167939803 - L2 LINE L2 -694 2620 2574 5236 142 69 9 chr5 35145823 35146675 -167938857 - MER4D LTR ERV1 0 903 1 242 206 136 141 chr5 35146939 35147018 -167938514 + MIR SINE MIR 52 130 -132 824 252 19 19 chr5 35147018 35147228 -167938304 + MER63A DNA MER1_type 1 210 0 242 206 136 141 chr5 35147228 35147332 -167938200 + MIR SINE MIR 130 234 -28 713 267 35 110 chr5 35147369 35147889 -167937643 - L2 LINE L2 -16 3297 2817 467 258 13 63 chr5 35148576 35148735 -167936797 + MER5A DNA MER1_type 39 189 0 1059 168 56 22 chr5 35149376 35149608 -167935924 + L1MB7 LINE L1 5929 6168 -16 685 207 43 37 chr5 35149760 35149948 -167935584 - MER5A DNA MER1_type 0 189 1 231 259 94 12 chr5 35149986 35150071 -167935461 - L1ME LINE L1 -297 5824 5733 472 306 59 11 chr5 35153099 35153285 -167932247 + L2 LINE L2 3115 3309 -4 641 250 83 36 chr5 35153322 35153514 -167932018 + LTR33A LTR ERVL 1 201 -322 617 222 98 15 chr5 35153548 35153751 -167931781 + LTR33A LTR ERVL 292 511 -12 1353 178 8 23 chr5 35153805 35154064 -167931468 - AluJo SINE Alu -12 300 46 232 356 35 23 chr5 35154097 35154184 -167931348 + MIR SINE MIR 13 100 -162 2366 212 46 22 chr5 35154199 35154747 -167930785 + MER119 DNA MER1_type 7 567 -16 201 237 0 0 chr5 35154748 35154786 -167930746 + MIR SINE MIR 109 146 -62 235 326 53 0 chr5 35154997 35155092 -167930440 + MLT1L LTR MaLR 166 265 -350 23 33 0 0 chr5 35156665 35156695 -167928837 + AT_rich Low_complexity Low_complexity 1 30 0 666 147 18 9 chr5 35156813 35156922 -167928610 + FLAM_A SINE Alu 1 110 -32 245 29 29 0 chr5 35156925 35156959 -167928573 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 813 100 0 0 chr5 35158514 35158656 -167926876 - AluY SINE Alu 0 316 175 2109 92 0 7 chr5 35158660 35158969 -167926563 - AluSg SINE Alu 0 307 1 333 306 28 39 chr5 35158975 35159155 -167926377 + L1MC4a LINE L1 5707 5884 -1924 44 0 0 0 chr5 35159155 35159199 -167926333 + AT_rich Low_complexity Low_complexity 1 44 0 1867 156 0 7 chr5 35159217 35159512 -167926020 + AluJb SINE Alu 2 294 -18 3932 164 21 26 chr5 35159681 35160399 -167925133 - L1MB3 LINE L1 -2 6181 5468 2078 97 0 4 chr5 35160405 35160674 -167924858 + AluSx SINE Alu 1 268 -44 2133 106 7 0 chr5 35160983 35161267 -167924265 - AluSx SINE Alu -26 286 1 4506 152 22 27 chr5 35161738 35162475 -167923057 + MER44D DNA MER2_type 1 605 0 3469 183 139 61 chr5 35162522 35163293 -167922239 + L1M4 LINE L1 14 876 -5666 1740 171 3 37 chr5 35163293 35163614 -167921918 + AluJo SINE Alu 1 310 -2 3469 183 139 61 chr5 35163614 35163808 -167921724 + L1M4 LINE L1 876 1054 -5488 228 219 55 82 chr5 35164331 35164404 -167921128 + L1PBa LINE L1 1339 1409 -5454 362 188 78 5 chr5 35165892 35165999 -167919533 + L1MC5 LINE L1 7813 8042 0 207 204 0 0 chr5 35166720 35166764 -167918768 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 1154 123 25 0 chr5 35167311 35167474 -167918058 - AluSg/x SINE Alu -18 294 128 2265 140 31 58 chr5 35168005 35168419 -167917113 - MER57A LTR ERV1 0 403 1 252 136 45 0 chr5 35168475 35168519 -167917013 + LTR65 LTR ERV1 344 389 -280 2091 122 3 3 chr5 35168810 35169104 -167916428 - AluSx SINE Alu -18 294 1 209 246 237 37 chr5 35169796 35170145 -167915387 + L2 LINE L2 1876 2369 -945 1055 189 56 36 chr5 35170159 35170408 -167915124 - MIR SINE MIR -1 261 8 242 346 149 14 chr5 35170443 35170651 -167914881 + L2 LINE L2 2440 2675 -639 238 235 147 0 chr5 35170707 35170775 -167914757 + MIR SINE MIR 63 140 -122 279 57 0 0 chr5 35171091 35171126 -167914406 - MADE1 DNA Mariner -45 35 1 189 152 0 0 chr5 35173548 35173581 -167911951 + MIR SINE MIR 174 206 -56 182 208 83 0 chr5 35173602 35173650 -167911882 - L2 LINE L2 0 3272 3221 198 308 202 43 chr5 35173655 35174051 -167911481 - L2 LINE L2 -601 2713 2255 374 262 119 122 chr5 35174570 35175039 -167910493 + L1M2 LINE L1 677 1144 -5705 3811 139 26 3 chr5 35175853 35176869 -167908663 + L1MA4A LINE L1 4616 5656 -644 2765 52 0 39 chr5 35176869 35177251 -167908281 - MER11A LTR ERVK 0 1266 900 3586 139 62 21 chr5 35177251 35177701 -167907831 + L1MA4A LINE L1 5657 6141 -162 1404 205 10 44 chr5 35177701 35177836 -167907696 + AluJo SINE Alu 1 139 -186 1530 102 0 0 chr5 35177836 35178032 -167907500 + AluSg/x SINE Alu 100 295 -17 1404 205 10 44 chr5 35178032 35178231 -167907301 + AluJo SINE Alu 139 325 0 3586 139 62 21 chr5 35178231 35178396 -167907136 + L1MA4A LINE L1 6141 6298 -5 1675 142 81 72 chr5 35178402 35178761 -167906771 + MLT1B LTR MaLR 27 388 -2 2041 130 30 0 chr5 35179169 35179470 -167906062 + AluSx SINE Alu 1 310 -2 527 220 193 62 chr5 35179932 35180293 -167905239 + L1MC5 LINE L1 6906 7244 -717 1778 156 74 52 chr5 35180301 35180572 -167904960 - MLT1A2 LTR MaLR 0 374 91 2324 116 35 27 chr5 35180572 35180944 -167904588 - THE1C LTR MaLR 0 375 1 1778 156 74 52 chr5 35180944 35181038 -167904494 - MLT1A2 LTR MaLR -283 91 1 287 267 133 13 chr5 35181044 35181194 -167904338 + L1MC4 LINE L1 7328 7495 -547 * 311 205 150 24 chr5 35181168 35181295 -167904237 + L1MC5 LINE L1 7303 7445 -516 432 238 38 38 chr5 35181298 35181483 -167904049 + L1MC5 LINE L1 7492 7676 -285 594 171 0 0 chr5 35181535 35181623 -167903909 - AluJ/FLAM SINE Alu -223 89 2 652 256 32 127 chr5 35181690 35182093 -167903439 + MLT1E-int LTR MaLR 1003 1367 -4 2030 256 71 14 chr5 35182105 35182655 -167902877 + MLT1E LTR MaLR 13 593 0 411 258 33 8 chr5 35182655 35182775 -167902757 - MIR SINE MIR -62 200 78 429 258 68 94 chr5 35183070 35183527 -167902005 + MER65A LTR ERV1 1 445 0 553 264 155 47 chr5 35183910 35183972 -167901560 + L1ME4a LINE L1 5519 5573 -548 2133 216 81 49 chr5 35183972 35184588 -167900944 + MER92B LTR ERV1 1 636 0 553 264 155 47 chr5 35184588 35185041 -167900491 + L1ME4a LINE L1 5573 6090 -31 34 0 0 0 chr5 35185042 35185076 -167900456 + AT_rich Low_complexity Low_complexity 1 34 0 2061 116 10 3 chr5 35185649 35185943 -167899589 + AluSq SINE Alu 1 296 -17 292 237 64 77 chr5 35187813 35187969 -167897563 + MLT1J1 LTR MaLR 289 442 -4 2936 75 0 11 chr5 35188379 35188750 -167896782 + L1PA8 LINE L1 5806 6172 0 298 198 107 66 chr5 35189417 35189538 -167895994 + MLT1J1 LTR MaLR 4 129 -317 242 29 29 0 chr5 35189632 35189667 -167895865 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2498 55 0 0 chr5 35189669 35189960 -167895572 - AluY SINE Alu -20 291 1 291 114 0 0 chr5 35193262 35193306 -167892226 + (A)n Simple_repeat Simple_repeat 1 44 0 610 277 96 36 chr5 35193758 35194225 -167891307 + L1MC4a LINE L1 5385 5822 -2173 1661 162 17 30 chr5 35194225 35194527 -167891005 + AluSx SINE Alu 6 303 -9 610 277 96 36 chr5 35194527 35194775 -167890757 + L1MC4a LINE L1 5822 7988 -7 2390 65 0 0 chr5 35194782 35195074 -167890458 - AluY SINE Alu -19 292 1 288 212 0 0 chr5 35195432 35195498 -167890034 + CT-rich Low_complexity Low_complexity 4 69 0 245 238 89 10 chr5 35195766 35195867 -167889665 + L1ME LINE L1 5709 5817 -304 269 208 69 0 chr5 35196003 35196075 -167889457 - MER103 DNA DNA -63 103 27 995 128 0 0 chr5 35196109 35196242 -167889290 - FLAM_C SINE Alu 0 133 1 3628 70 2 0 chr5 35197450 35197919 -167887613 + L1PA13 LINE L1 5708 6177 0 1818 119 11 8 chr5 35198353 35198613 -167886919 + AluSx SINE Alu 1 261 -51 185 293 17 0 chr5 35198698 35198756 -167886776 - MIR SINE MIR -66 142 84 1949 150 3 10 chr5 35199314 35199614 -167885918 + AluSx SINE Alu 1 298 -14 516 275 89 44 chr5 35200478 35200682 -167884850 + L1ME4a LINE L1 5672 5866 -255 1609 204 0 17 chr5 35200682 35200981 -167884551 + AluJb SINE Alu 1 294 -18 516 275 89 44 chr5 35200981 35201205 -167884327 + L1ME4a LINE L1 5866 6119 -2 889 179 46 15 chr5 35203162 35203358 -167882174 - L1MA8 LINE L1 -7 6284 6083 2255 102 0 3 chr5 35203472 35203767 -167881765 + AluSx SINE Alu 1 294 -18 216 317 24 0 chr5 35204090 35204172 -167881360 + GA-rich Low_complexity Low_complexity 1 84 0 290 278 103 10 chr5 35204978 35205075 -167880457 + MER39 LTR ERV1 1 106 -601 1597 173 108 6 chr5 35205267 35205602 -167879930 + LTR48 LTR ERV1 84 452 -335 4238 136 33 13 chr5 35205607 35206304 -167879228 + MER50 LTR ERV1 1 711 -23 434 213 11 34 chr5 35206345 35206531 -167879001 + LTR48B LTR ERV1 429 644 0 22 56 0 0 chr5 35207748 35207784 -167877748 + AT_rich Low_complexity Low_complexity 1 36 0 201 286 36 0 chr5 35208557 35208613 -167876919 + MIR SINE MIR 38 95 -113 230 0 33 0 chr5 35209551 35209581 -167875951 + (CAA)n Simple_repeat Simple_repeat 2 32 0 855 147 0 15 chr5 35210757 35210893 -167874639 + AluJo SINE Alu 1 134 -178 180 250 42 56 chr5 35210939 35211011 -167874521 - L3 LINE CR1 -525 1052 982 796 211 78 12 chr5 35212081 35212247 -167873285 + MER5B DNA MER1_type 2 178 0 388 288 217 0 chr5 35212280 35212492 -167873040 - MIR SINE MIR 0 262 5 416 204 46 37 chr5 35212660 35212768 -167872764 + MLT1C LTR MaLR 1 109 -358 935 242 21 33 chr5 35212911 35213151 -167872381 + MER93a LTR ERV1 166 402 0 * 2014 168 42 21 chr5 35213151 35213523 -167872009 + MLT1C LTR MaLR 86 465 -2 204 40 0 0 chr5 35215063 35215088 -167870444 + (TG)n Simple_repeat Simple_repeat 1 25 0 360 0 0 0 chr5 35215091 35215131 -167870401 + (GA)n Simple_repeat Simple_repeat 1 40 0 394 165 24 2 chr5 35215173 35215262 -167870270 - LTR50 LTR ERVL 0 795 435 505 245 199 25 chr5 35215268 35215675 -167869857 - LTR50 LTR ERVL -184 611 2 570 257 41 0 chr5 35215989 35216172 -167869360 + LTR50 LTR ERVL 326 604 -191 1975 192 11 6 chr5 35216469 35216823 -167868709 - MLT2D LTR ERVL -51 363 8 2841 146 49 0 chr5 35217283 35217714 -167867818 + LTR47A LTR ERVL 1 452 0 495 230 224 50 chr5 35217794 35218137 -167867395 + MLT1L LTR MaLR 172 574 -41 362 259 153 48 chr5 35218551 35218779 -167866753 + MLT1J2 LTR MaLR 74 325 -125 993 141 0 0 chr5 35218808 35218957 -167866575 + AluSg/x SINE Alu 143 291 -21 289 169 34 0 chr5 35218973 35219032 -167866500 + MLT1J1 LTR MaLR 367 427 -19 306 293 88 28 chr5 35219111 35219292 -167866240 + L2 LINE L2 3121 3312 -1 600 236 117 60 chr5 35219294 35219546 -167865986 + MIR SINE MIR 3 262 0 420 295 0 9 chr5 35220539 35220644 -167864888 - MIR SINE MIR -89 119 16 284 284 80 0 chr5 35220804 35220892 -167864640 + MIR3 SINE MIR 3 97 -111 1068 231 57 0 chr5 35221187 35221399 -167864133 - MER58A DNA MER1_type 0 224 1 257 270 56 40 chr5 35221729 35221855 -167863677 - LTR67 LTR ERVL -2 555 428 387 169 0 0 chr5 35223211 35223282 -167862250 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 438 20 0 0 chr5 35223282 35223333 -167862199 + (GA)n Simple_repeat Simple_repeat 2 52 0 1738 169 14 4 chr5 35223329 35223608 -167861924 - AluJb SINE Alu -30 282 1 1816 151 48 65 chr5 35225876 35226170 -167859362 - MLT1B LTR MaLR 0 390 103 1953 176 14 6 chr5 35226170 35226527 -167859005 - MLT1A1 LTR MaLR -2 363 4 1816 151 48 65 chr5 35226527 35226629 -167858903 - MLT1B LTR MaLR -287 103 1 1829 143 20 0 chr5 35227000 35227293 -167858239 - Tigger3(Golem) DNA MER2_type -1 3028 2730 2048 142 51 20 chr5 35227293 35227646 -167857886 - THE1B LTR MaLR 0 364 1 10025 100 3 0 chr5 35227646 35228977 -167856555 - THE1B-int LTR MaLR 0 1580 246 1191 65 0 13 chr5 35228977 35229132 -167856400 - HERV17 LTR ERV1 -6936 1690 1538 5608 86 3 55 chr5 35229299 35230190 -167855342 - HERV17 LTR ERV1 -7078 1548 704 5492 73 1 1 chr5 35230389 35231073 -167854459 - HERV17 LTR ERV1 -7921 705 22 3524 133 15 4 chr5 35231095 35231614 -167853918 - LTR17 LTR ERV1 0 780 256 575 147 20 0 chr5 35231615 35231717 -167853815 - MLT2D LTR ERVL -213 201 98 3539 137 28 5 chr5 35231749 35232184 -167853348 + L1PA16 LINE L1 5045 5507 -659 1877 151 0 13 chr5 35232184 35232488 -167853044 + AluSq SINE Alu 1 300 -13 3539 137 28 5 chr5 35232488 35232818 -167852714 + L1PA16 LINE L1 5507 5828 -338 1971 170 15 0 chr5 35232826 35233168 -167852364 - MER50 LTR ERV1 -387 347 1 254 189 61 61 chr5 35233191 35233323 -167852209 + L1MC5 LINE L1 7460 7591 -370 26 82 0 0 chr5 35233414 35233475 -167852057 + AT_rich Low_complexity Low_complexity 1 61 0 4573 115 6 1 chr5 35233489 35234150 -167851382 - THE1B-int LTR MaLR -916 664 1 2198 110 51 28 chr5 35234150 35234506 -167851026 - THE1B LTR MaLR 0 364 1 275 220 95 71 chr5 35234508 35234676 -167850856 + L1MC5 LINE L1 7751 7922 -39 191 287 58 23 chr5 35234878 35234965 -167850567 - L2 LINE L2 0 3272 3183 294 29 0 0 chr5 35235329 35235364 -167850168 + (GA)n Simple_repeat Simple_repeat 2 36 0 414 332 69 43 chr5 35235997 35236301 -167849231 + L2 LINE L2 3002 3313 0 280 198 37 49 chr5 35236845 35236926 -167848606 + MLT1J1 LTR MaLR 1 80 -366 259 306 20 20 chr5 35237049 35237147 -167848385 + MLT1J1 LTR MaLR 278 375 -71 630 227 0 8 chr5 35238961 35239089 -167846443 - FLAM_C SINE Alu -16 127 1 629 25 0 12 chr5 35239163 35239243 -167846289 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 2499 50 0 3 chr5 35239859 35240157 -167845375 + AluY SINE Alu 1 297 -14 308 285 117 15 chr5 35240856 35240993 -167844539 - MIR SINE MIR -2 260 110 1890 237 41 14 chr5 35241073 35241580 -167843952 + MER90 LTR ERV1 92 612 -2 2904 216 20 14 chr5 35242380 35242689 -167842843 + L1MB3 LINE L1 5468 5774 -409 252 0 0 0 chr5 35242689 35242717 -167842815 + (TG)n Simple_repeat Simple_repeat 2 29 0 2904 216 20 14 chr5 35242717 35243114 -167842418 + L1MB3 LINE L1 5774 6178 -5 1875 162 44 16 chr5 35245119 35245484 -167840048 - THE1C LTR MaLR 0 375 1 912 180 32 0 chr5 35246156 35246345 -167839187 - L1M2 LINE L1 -673 5639 5445 2445 189 31 17 chr5 35246353 35246930 -167838602 + L1MA10 LINE L1 5742 6326 -8 381 357 7 0 chr5 35247109 35247252 -167838280 - MIR SINE MIR -106 156 13 290 301 130 8 chr5 35247805 35247928 -167837604 + MIR SINE MIR 2 139 -123 230 343 39 20 chr5 35249810 35249912 -167835620 - MIR SINE MIR -135 127 24 382 306 107 0 chr5 35249992 35250244 -167835288 - MER20B DNA MER1_type -1 782 504 337 296 39 34 chr5 35250629 35250835 -167834697 - L1ME4a LINE L1 -161 5960 5754 3666 121 2 34 chr5 35251490 35251799 -167833733 - L1P LINE L1 -842 5304 5023 2383 72 0 16 chr5 35251799 35252105 -167833427 - AluY SINE Alu -10 301 1 3666 121 2 34 chr5 35252105 35252415 -167833117 - L1P LINE L1 -1123 5023 4705 6639 62 0 2 chr5 35252415 35253263 -167832269 + L1PA7 LINE L1 5308 6153 -1 225 346 10 10 chr5 35253930 35254031 -167831501 - MLT1I LTR MaLR -271 138 38 1511 177 26 39 chr5 35254381 35254692 -167830840 - AluJb SINE Alu -5 307 1 24 32 0 0 chr5 35255278 35255309 -167830223 + AT_rich Low_complexity Low_complexity 1 31 0 648 179 0 15 chr5 35255487 35255621 -167829911 - FLAM_C SINE Alu -1 132 1 642 299 28 24 chr5 35255786 35255997 -167829535 - LTR16A LTR ERVL -2 448 237 1581 202 16 58 chr5 35256099 35256480 -167829052 + MLT1A1 LTR MaLR 1 365 0 335 185 31 0 chr5 35256923 35256988 -167828544 + HsTC2 DNA Tc2 478 544 -1354 1880 189 29 3 chr5 35257407 35257750 -167827782 + MLT1A1 LTR MaLR 14 365 0 204 125 0 0 chr5 35258232 35258264 -167827268 + (TTC)n Simple_repeat Simple_repeat 2 33 0 25 0 0 0 chr5 35258559 35258584 -167826948 + AT_rich Low_complexity Low_complexity 1 25 0 291 284 47 24 chr5 35260191 35260318 -167825214 + L2 LINE L2 1855 1984 -1330 1798 224 65 9 chr5 35260341 35260837 -167824695 + LTR27 LTR ERV1 2 501 0 791 219 47 61 chr5 35261770 35262049 -167823483 - L1MA4A LINE L1 -23 6280 6006 390 303 118 0 chr5 35262321 35262499 -167823033 + L2 LINE L2 3115 3313 0 534 206 0 0 chr5 35263036 35263133 -167822399 - MLT1A1 LTR MaLR 0 365 269 303 177 152 25 chr5 35263239 35263318 -167822214 + L1MEc LINE L1 1983 2071 -4325 306 252 86 86 chr5 35263364 35263515 -167822017 + L1MEc LINE L1 2076 2226 -4170 491 305 121 0 chr5 35264211 35264385 -167821147 - MIR SINE MIR -65 197 3 945 196 106 73 chr5 35266293 35266716 -167818816 - LTR56 LTR ERV1 0 445 9 1113 216 22 117 chr5 35266783 35267186 -167818346 - MLT1A1 LTR MaLR 0 365 1 217 376 64 7 chr5 35267193 35267334 -167818198 + MIR SINE MIR 84 232 -30 28 29 0 0 chr5 35267346 35267381 -167818151 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 35267961 35267985 -167817547 + AT_rich Low_complexity Low_complexity 1 24 0 819 276 42 8 chr5 35268057 35268296 -167817236 + MIR SINE MIR 16 262 0 24 32 0 0 chr5 35269131 35269162 -167816370 + AT_rich Low_complexity Low_complexity 1 31 0 2617 36 42 0 chr5 35269465 35269797 -167815735 + L1PA5 LINE L1 5809 6154 0 605 150 0 60 chr5 35270086 35270219 -167815313 - FRAM SINE Alu 0 176 52 2113 121 3 14 chr5 35270342 35270639 -167814893 + AluSq SINE Alu 3 296 -17 22 35 0 0 chr5 35270654 35270683 -167814849 + AT_rich Low_complexity Low_complexity 1 29 0 1951 242 35 12 chr5 35270772 35271285 -167814247 + L1MD3 LINE L1 7471 7995 0 2098 124 3 6 chr5 35271326 35271640 -167813892 - AluSq SINE Alu 0 313 1 22 70 0 0 chr5 35271642 35271685 -167813847 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr5 35274350 35274393 -167811139 + AT_rich Low_complexity Low_complexity 1 43 0 186 133 0 0 chr5 35274833 35274863 -167810669 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1833 198 90 48 chr5 35275687 35276166 -167809366 + MLT1D LTR MaLR 7 505 0 823 316 53 34 chr5 35276593 35276973 -167808559 - MLT1G1 LTR MaLR -201 394 8 414 281 47 32 chr5 35278506 35278763 -167806769 - MLT1J LTR MaLR -123 323 64 1644 189 0 29 chr5 35279181 35279493 -167806039 + AluJo SINE Alu 1 303 -9 331 294 93 26 chr5 35279720 35279914 -167805618 + MLT1L LTR MaLR 374 580 -35 30 59 0 0 chr5 35280387 35280438 -167805094 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 35281781 35281804 -167803728 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 35281873 35281921 -167803611 + AT_rich Low_complexity Low_complexity 1 48 0 190 397 0 0 chr5 35282111 35282184 -167803348 - L2 LINE L2 -4 3268 3196 2451 67 0 3 chr5 35282252 35282552 -167802980 + AluY SINE Alu 1 299 -12 1686 266 98 32 chr5 35282764 35283399 -167802133 - L1MEc LINE L1 -3085 3297 2705 2025 137 3 3 chr5 35283399 35283698 -167801834 - AluSx SINE Alu -13 299 1 1686 266 98 32 chr5 35283698 35284283 -167801249 - L1MEc LINE L1 -3677 2705 2036 1843 117 89 7 chr5 35284317 35284598 -167800934 + AluSx SINE Alu 1 304 -8 1860 170 3 0 chr5 35284888 35285182 -167800350 - AluSx SINE Alu -17 295 1 917 279 46 46 chr5 35285184 35285682 -167799850 - L1MEc LINE L1 -4597 1787 1290 198 191 0 0 chr5 35285710 35285752 -167799780 + (TA)n Simple_repeat Simple_repeat 1 42 0 1833 219 44 38 chr5 35286291 35286793 -167798739 - MLT1D LTR MaLR 0 505 1 2308 133 28 22 chr5 35287302 35287664 -167797868 + THE1B LTR MaLR 1 364 0 2218 120 17 9 chr5 35288110 35288460 -167797072 - THE1A LTR MaLR -2 353 1 1700 228 0 27 chr5 35288513 35288886 -167796646 + MLT1A1 LTR MaLR 1 363 -2 3498 207 95 86 chr5 35288888 35290052 -167795480 + MLT1A1-int LTR MaLR 2 1176 -559 198 208 0 0 chr5 35290143 35290196 -167795336 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2352 150 57 2 chr5 35291106 35291512 -167794020 - MSTA LTR MaLR 0 428 1 1952 183 19 0 chr5 35293243 35293615 -167791917 + L1MA7 LINE L1 5487 5865 -426 1521 165 216 3 chr5 35293617 35293968 -167791564 + MSTA LTR MaLR 3 428 0 2680 134 0 0 chr5 35293970 35294373 -167791159 + THE1C-int LTR MaLR 3 405 -1175 1318 105 0 0 chr5 35294380 35294552 -167790980 - AluSg/x SINE Alu -1 311 140 6512 169 31 9 chr5 35294613 35295752 -167789780 + THE1C-int LTR MaLR 417 1580 0 1619 152 97 29 chr5 35295754 35296103 -167789429 + THE1C LTR MaLR 3 375 0 1029 198 32 0 chr5 35296103 35296407 -167789125 + L1MA7 LINE L1 5861 6280 -11 21 36 0 0 chr5 35296522 35296550 -167788982 + AT_rich Low_complexity Low_complexity 1 28 0 273 210 0 0 chr5 35296927 35296989 -167788543 + (CATA)n Simple_repeat Simple_repeat 3 64 0 1502 319 80 40 chr5 35297205 35297855 -167787677 + MER115 DNA AcHobo 8 683 -10 2447 134 26 2 chr5 35298296 35298721 -167786811 + L1MA5A LINE L1 5860 6294 -3 2024 118 7 0 chr5 35298908 35299208 -167786324 + AluSx SINE Alu 1 302 0 432 97 0 0 chr5 35299210 35299272 -167786260 + (TA)n Simple_repeat Simple_repeat 2 63 0 30 0 0 0 chr5 35301308 35301338 -167784194 + AT_rich Low_complexity Low_complexity 1 30 0 7208 69 7 3 chr5 35301421 35302375 -167783157 - L1P LINE L1 -1689 4457 3500 6888 65 3 0 chr5 35302375 35303963 -167781569 + L1PA6 LINE L1 4598 6154 0 1774 174 23 45 chr5 35304648 35305045 -167780487 + MLT1B LTR MaLR 1 388 -2 27 0 0 0 chr5 35305301 35305328 -167780204 + AT_rich Low_complexity Low_complexity 1 27 0 270 370 92 0 chr5 35305590 35305763 -167779769 - MIR SINE MIR -11 251 63 240 264 0 0 chr5 35305937 35306024 -167779508 + (TA)n Simple_repeat Simple_repeat 1 87 0 29 47 0 0 chr5 35306098 35306141 -167779391 + AT_rich Low_complexity Low_complexity 1 43 0 1038 195 0 63 chr5 35307798 35307925 -167777607 - MLT1C LTR MaLR 0 467 358 2189 108 3 0 chr5 35307925 35308221 -167777311 - AluY SINE Alu -14 297 1 1038 195 0 63 chr5 35308221 35308314 -167777218 - MLT1C LTR MaLR -109 358 261 601 101 18 46 chr5 35308314 35308423 -167777109 - L1M2 LINE L1 -799 5513 5408 687 242 6 0 chr5 35308425 35308582 -167776950 + L1MA9 LINE L1 5884 6041 -271 348 276 23 0 chr5 35308719 35308806 -167776726 + L1PA16 LINE L1 2082 2170 -5411 2298 104 3 3 chr5 35308953 35309261 -167776271 + AluSx SINE Alu 1 308 -4 8654 237 90 25 chr5 35309355 35311664 -167773868 + L1PA16 LINE L1 2182 4340 -3264 2119 93 0 4 chr5 35311664 35311958 -167773574 + AluSg SINE Alu 14 306 0 8654 237 90 25 chr5 35311958 35314640 -167770892 + L1PA16 LINE L1 4340 7604 0 42971 35 22 2 chr5 35314649 35320835 -167764697 + L1HS LINE L1 3 6155 0 209 200 0 0 chr5 35321485 35321525 -167764007 - MER5B DNA MER1_type 0 178 139 196 270 79 45 chr5 35321634 35321723 -167763809 + MER5B DNA MER1_type 87 178 0 2085 125 0 0 chr5 35322878 35323174 -167762358 - AluSx SINE Alu -16 296 1 1636 254 36 18 chr5 35324229 35324725 -167760807 + MLT1D LTR MaLR 1 505 0 2307 98 0 0 chr5 35324905 35325210 -167760322 - AluSx SINE Alu -7 305 1 222 227 0 45 chr5 35325743 35325809 -167759723 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 495 318 9 57 chr5 35327362 35327573 -167757959 + MIR SINE MIR 2 202 -60 186 171 0 0 chr5 35327610 35327651 -167757881 + GA-rich Low_complexity Low_complexity 2 42 0 258 277 0 0 chr5 35327771 35327836 -167757696 - LTR16A1 LTR ERVL -2 455 391 2065 205 40 5 chr5 35328918 35329298 -167756234 - MSTD LTR MaLR -3 393 1 658 105 44 44 chr5 35330040 35330154 -167755378 + L1PA14 LINE L1 6044 6157 -4 39 68 0 0 chr5 35330228 35330302 -167755230 + AT_rich Low_complexity Low_complexity 1 74 0 26 50 0 0 chr5 35330503 35330543 -167754989 + AT_rich Low_complexity Low_complexity 1 40 0 26 50 0 0 chr5 35331514 35331554 -167753978 + AT_rich Low_complexity Low_complexity 1 40 0 234 0 0 0 chr5 35331621 35331647 -167753885 + (CA)n Simple_repeat Simple_repeat 2 27 0 1819 221 29 8 chr5 35331792 35332167 -167753365 + MLT2B3 LTR ERVL 133 515 -39 182 152 0 43 chr5 35332173 35332219 -167753313 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 25 31 0 0 chr5 35332396 35332428 -167753104 + AT_rich Low_complexity Low_complexity 1 32 0 388 197 0 0 chr5 35332775 35332841 -167752691 - U4 snRNA snRNA -79 66 1 25 31 0 0 chr5 35332911 35332943 -167752589 + AT_rich Low_complexity Low_complexity 1 32 0 342 67 0 0 chr5 35335071 35335116 -167750416 + (TG)n Simple_repeat Simple_repeat 2 46 0 688 330 105 6 chr5 35335171 35335522 -167750010 - LTR16B LTR ERVL -31 433 48 1124 210 36 88 chr5 35335652 35336037 -167749495 + MLT1A1 LTR MaLR 1 365 0 1533 162 4 50 chr5 35336141 35336532 -167749000 - L1M LINE L1 -740 5428 5067 * 4003 196 30 32 chr5 35336515 35337430 -167748102 + L1MA10 LINE L1 5420 6332 -2 25 51 0 0 chr5 35338155 35338194 -167747338 + AT_rich Low_complexity Low_complexity 1 39 0 254 273 0 0 chr5 35338300 35338355 -167747177 - MLT1I LTR MaLR 0 409 355 300 308 38 23 chr5 35338484 35338617 -167746915 - MLT1I LTR MaLR -270 139 5 270 343 66 28 chr5 35338620 35338833 -167746699 - L3 LINE CR1 -921 656 436 1702 137 22 41 chr5 35338905 35339220 -167746312 - MER44D DNA MER2_type -1 608 30 338 302 39 8 chr5 35339326 35339455 -167746077 + MIR SINE MIR 81 213 -49 248 303 51 29 chr5 35339600 35339775 -167745757 - L1ME LINE L1 -303 5818 5640 21 36 0 0 chr5 35340091 35340119 -167745413 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 35340414 35340443 -167745089 + AT_rich Low_complexity Low_complexity 1 29 0 256 253 77 0 chr5 35340499 35340590 -167744942 + MLT1I LTR MaLR 312 409 0 1822 123 0 4 chr5 35340892 35341160 -167744372 - AluSg SINE Alu -43 267 1 2101 74 17 37 chr5 35341554 35341850 -167743682 - AluY SINE Alu -21 290 1 1838 152 3 3 chr5 35341852 35342142 -167743390 - AluJo SINE Alu -16 296 7 2685 32 3 3 chr5 35342910 35343220 -167742312 + L1PA2 LINE L1 5846 6155 0 1389 195 102 0 chr5 35343404 35343660 -167741872 + AluJb SINE Alu 1 282 -30 299 25 25 0 chr5 35343660 35343700 -167741832 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1820 161 21 0 chr5 35343714 35343999 -167741533 + AluJb SINE Alu 1 291 -21 583 183 92 0 chr5 35344003 35344123 -167741409 - MER3 DNA MER1_type -57 152 22 1557 183 14 30 chr5 35344125 35344284 -167741248 - AluJb SINE Alu -21 291 138 2371 98 0 7 chr5 35344284 35344590 -167740942 - AluSg SINE Alu -6 304 1 1557 183 14 30 chr5 35344590 35344725 -167740807 - AluJb SINE Alu -174 138 2 1856 149 3 45 chr5 35344788 35345096 -167740436 + AluSx SINE Alu 1 295 -17 216 336 82 27 chr5 35345249 35345359 -167740173 + MER5B DNA MER1_type 55 170 -8 * 269 211 0 0 chr5 35345351 35345408 -167740124 + MIR3 SINE MIR 147 203 -5 910 102 0 0 chr5 35345566 35345684 -167739848 + FLAM_C SINE Alu 1 118 -15 2114 138 3 3 chr5 35346004 35346342 -167739190 + AluSx SINE Alu 1 312 0 1416 163 41 91 chr5 35346745 35346868 -167738664 + AluJo SINE Alu 2 130 -182 1739 133 18 14 chr5 35346868 35347147 -167738385 + AluSg SINE Alu 1 280 -30 1416 163 41 91 chr5 35347147 35347343 -167738189 + AluJo SINE Alu 130 305 -7 257 248 191 19 chr5 35347413 35347518 -167738014 - L2 LINE L2 -212 3060 2938 2055 112 6 29 chr5 35347567 35347879 -167737653 - AluSx SINE Alu -7 305 1 1447 157 39 57 chr5 35348704 35348832 -167736700 + AluJo SINE Alu 1 130 -182 2049 124 10 0 chr5 35348832 35349122 -167736410 - AluSx SINE Alu -19 293 1 1447 157 39 57 chr5 35349122 35349273 -167736259 + AluJo SINE Alu 130 275 -37 423 0 0 0 chr5 35349278 35349325 -167736207 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2292 107 0 0 chr5 35349780 35350080 -167735452 - AluSg SINE Alu -10 300 1 23 0 0 0 chr5 35350103 35350126 -167735406 + AT_rich Low_complexity Low_complexity 1 23 0 1980 122 0 0 chr5 35350126 35350396 -167735136 - AluSx SINE Alu -4 308 39 1588 108 27 0 chr5 35350917 35351235 -167734297 + L1P4 LINE L1 5161 5485 -676 2292 95 0 7 chr5 35351236 35351541 -167733991 + AluSx SINE Alu 2 304 -8 2013 218 137 58 chr5 35351719 35351868 -167733664 + MER82 DNA MER2_type 1 137 -516 2111 112 0 43 chr5 35351868 35352171 -167733361 + AluSx SINE Alu 1 290 -22 2013 218 137 58 chr5 35352171 35352626 -167732906 + MER82 DNA MER2_type 137 653 0 226 321 30 30 chr5 35352816 35352950 -167732582 + MLT1H LTR MaLR 29 162 -387 982 146 16 60 chr5 35353292 35353477 -167732055 - FAM SINE Alu -1 48 1 430 252 50 8 chr5 35353538 35353657 -167731875 + MLT1G1 LTR MaLR 16 139 -456 2440 120 25 8 chr5 35353756 35354114 -167731418 + THE1B LTR MaLR 1 364 0 9483 107 65 45 chr5 35354115 35355657 -167729875 + THE1B-int LTR MaLR 2 1574 -6 1283 123 49 5 chr5 35355664 35355867 -167729665 + THE1B LTR MaLR 3 214 -150 801 177 15 0 chr5 35355876 35356006 -167729526 - FLAM_C SINE Alu -1 132 1 662 146 0 0 chr5 35356008 35356111 -167729421 - AluSp/q SINE Alu -1 312 210 21 0 0 0 chr5 35360983 35361004 -167724528 + AT_rich Low_complexity Low_complexity 1 21 0 305 245 113 19 chr5 35361412 35361518 -167724014 + L2 LINE L2 3104 3219 -94 1691 163 80 0 chr5 35361522 35361822 -167723710 + MER2 DNA MER2_type 1 324 -21 1370 118 91 0 chr5 35361822 35362043 -167723489 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 35362059 35362089 -167723443 + AT_rich Low_complexity Low_complexity 1 30 0 1674 217 13 59 chr5 35362319 35362363 -167723169 + MLT1A2 LTR MaLR 1 45 -329 2505 57 3 0 chr5 35362363 35362660 -167722872 + AluY SINE Alu 1 298 -13 1674 217 13 59 chr5 35362660 35362938 -167722594 + MLT1A2 LTR MaLR 45 304 -70 1935 162 30 0 chr5 35362938 35363241 -167722291 - AluSx SINE Alu 0 312 1 1674 217 13 59 chr5 35363241 35363309 -167722223 + MLT1A2 LTR MaLR 304 374 0 1021 191 77 0 chr5 35363329 35363457 -167722075 + MER3 DNA MER1_type 1 150 -59 2480 59 0 10 chr5 35363457 35363763 -167721769 - AluY SINE Alu -8 303 1 1021 191 77 0 chr5 35363763 35363828 -167721704 + MER3 DNA MER1_type 150 209 0 636 210 107 51 chr5 35364325 35364524 -167721008 - MLT1F LTR MaLR 0 626 334 1351 181 49 58 chr5 35364525 35364757 -167720775 - MLT1A1 LTR MaLR 0 365 134 2011 124 0 28 chr5 35364757 35365088 -167720444 + AluSg SINE Alu 1 323 0 1351 181 49 58 chr5 35365088 35365180 -167720352 - MLT1A1 LTR MaLR -231 134 43 528 300 13 0 chr5 35365388 35365538 -167719994 - MLT1F LTR MaLR -400 167 16 399 371 34 21 chr5 35366762 35367053 -167718479 + L2 LINE L2 1978 2272 -1042 21 0 0 0 chr5 35367455 35367476 -167718056 + AT_rich Low_complexity Low_complexity 1 21 0 256 302 94 9 chr5 35367871 35367977 -167717555 + L2 LINE L2 3158 3272 0 23 33 0 0 chr5 35369260 35369290 -167716242 + AT_rich Low_complexity Low_complexity 1 30 0 300 273 0 0 chr5 35369645 35369733 -167715799 + MIR SINE MIR 100 187 -75 1985 215 14 65 chr5 35369811 35370209 -167715323 + L1M2 LINE L1 2528 2945 -3903 2154 133 0 0 chr5 35370209 35370510 -167715022 + AluSg SINE Alu 1 301 -9 1985 215 14 65 chr5 35370510 35371026 -167714506 + L1M2 LINE L1 2945 3392 -3456 2712 189 47 2 chr5 35371026 35371554 -167713978 + L1PB4 LINE L1 5604 6155 -1 3300 232 61 22 chr5 35371706 35372140 -167713392 + L1MC3 LINE L1 6147 6563 -1222 2057 170 123 5 chr5 35372140 35372523 -167713009 + MSTA LTR MaLR 1 428 0 3300 232 61 22 chr5 35372523 35373025 -167712507 + L1MC3 LINE L1 6563 7119 -666 606 211 34 46 chr5 35373089 35373264 -167712268 + MER104 DNA Tc2 7 179 -1 204 40 0 0 chr5 35374079 35374104 -167711428 + (TA)n Simple_repeat Simple_repeat 1 25 0 2367 67 0 10 chr5 35374594 35374893 -167710639 - AluY SINE Alu -15 296 1 584 225 7 53 chr5 35375206 35375357 -167710175 - MER20 DNA MER1_type -52 167 24 770 249 19 19 chr5 35375718 35375923 -167709609 + MER20 DNA MER1_type 8 212 -7 672 168 40 0 chr5 35376114 35376239 -167709293 + L1PA13 LINE L1 6033 6162 -1 33 0 0 0 chr5 35376899 35376932 -167708600 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 35377611 35377635 -167707897 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 35377694 35377722 -167707810 + AT_rich Low_complexity Low_complexity 1 28 0 3545 33 0 0 chr5 35378208 35378629 -167706903 - L1PA3 LINE L1 -14 6141 5721 6897 22 0 0 chr5 35378629 35379788 -167705744 + L1PA3 LINE L1 4563 5721 -434 429 268 0 0 chr5 35379958 35380055 -167705477 + Tigger3(Golem) DNA MER2_type 2 98 -2931 380 262 0 0 chr5 35380068 35380152 -167705380 + Tigger3(Golem) DNA MER2_type 2954 3037 0 587 165 0 9 chr5 35380498 35380613 -167704919 + (TA)n Simple_repeat Simple_repeat 1 114 0 1958 138 7 0 chr5 35380613 35380911 -167704621 - AluSq SINE Alu -11 302 3 28 48 0 0 chr5 35381269 35381311 -167704221 + AT_rich Low_complexity Low_complexity 1 42 0 1364 208 50 10 chr5 35382436 35382734 -167702798 - AluJo SINE Alu 0 312 3 285 149 0 60 chr5 35384048 35384115 -167701417 + MADE1 DNA Mariner 1 63 -17 243 309 170 31 chr5 35384279 35384538 -167700994 - MLT1J LTR MaLR -210 301 7 329 243 0 162 chr5 35386611 35386784 -167698748 - L2 LINE L2 -4 3309 3165 386 69 17 0 chr5 35387294 35387352 -167698180 + (CA)n Simple_repeat Simple_repeat 1 59 0 531 309 43 13 chr5 35387652 35387885 -167697647 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 35389259 35389310 -167696222 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 35389637 35389666 -167695866 + AT_rich Low_complexity Low_complexity 1 29 0 6187 34 0 1 chr5 35389825 35390565 -167694967 - L1PA3 LINE L1 -3 6152 5414 10610 37 0 0 chr5 35390565 35391868 -167693664 + L1PA3 LINE L1 4101 5403 -743 209 355 117 19 chr5 35392409 35392623 -167692909 + L2 LINE L2 2029 2263 -1051 21 0 0 0 chr5 35392699 35392720 -167692812 + AT_rich Low_complexity Low_complexity 1 21 0 1068 141 98 86 chr5 35393404 35393659 -167691873 - Tigger2 DNA MER2_type -10 2708 2451 3803 183 34 0 chr5 35393713 35394446 -167691086 - Tigger2 DNA MER2_type -1959 759 2 1285 282 94 80 chr5 35394544 35396053 -167689479 + MER110-int LTR ERV1 1952 3590 -1057 675 273 103 8 chr5 35396260 35396513 -167689019 + MLT1D LTR MaLR 1 277 -228 289 170 0 0 chr5 35396516 35396563 -167688969 + MLT1A2 LTR MaLR 1 47 -327 381 300 0 0 chr5 35396605 35396715 -167688817 + MLT1A2 LTR MaLR 51 160 -214 940 191 11 26 chr5 35396767 35396978 -167688554 + MLT1A2 LTR MaLR 182 374 0 * 960 274 9 0 chr5 35396978 35397207 -167688325 + MLT1D LTR MaLR 275 505 0 665 197 108 18 chr5 35397345 35397565 -167687967 - MER33 DNA MER1_type -98 226 1 180 0 0 0 chr5 35397604 35397624 -167687908 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 476 324 43 10 chr5 35397775 35397982 -167687550 + MER110 LTR ERV1 242 455 -36 5207 156 7 7 chr5 35398382 35399224 -167686308 + MSTA-int LTR MaLR 739 1580 0 1582 185 130 18 chr5 35399224 35399608 -167685924 + MSTA LTR MaLR 1 427 -1 1573 251 48 15 chr5 35400049 35400504 -167685028 - MLT1D LTR MaLR 0 505 36 289 308 8 26 chr5 35400775 35400892 -167684640 + MIR SINE MIR 124 238 -24 767 269 28 9 chr5 35402089 35402301 -167683231 + MER20 DNA MER1_type 2 217 -2 219 69 0 0 chr5 35402339 35402368 -167683164 + (T)n Simple_repeat Simple_repeat 1 29 0 314 371 87 27 chr5 35402635 35403037 -167682495 - MLT1J1 LTR MaLR 0 446 21 1062 122 6 0 chr5 35403062 35403218 -167682314 + AluSg/x SINE Alu 151 307 -5 2108 115 10 6 chr5 35403366 35403678 -167681854 - AluSq SINE Alu 0 313 1 410 333 70 33 chr5 35404369 35404582 -167680950 + L1PA16 LINE L1 790 1010 -6564 12236 240 25 20 chr5 35404706 35408438 -167677094 + L1PA16 LINE L1 2182 5895 -1709 1061 173 154 58 chr5 35408438 35408698 -167676834 + AluJo SINE Alu 2 286 -16 706 71 0 18 chr5 35408698 35408810 -167676722 + (GGAA)n Simple_repeat Simple_repeat 3 112 0 12236 240 25 20 chr5 35408810 35409638 -167675894 + L1PA16 LINE L1 5895 6774 -830 1775 86 19 89 chr5 35409638 35409952 -167675580 + L1PA10 LINE L1 5876 6167 -1 12236 240 25 20 chr5 35409952 35410683 -167674849 + L1PA16 LINE L1 6774 7500 -104 2046 192 104 41 chr5 35411082 35412170 -167673362 - pTR5 LTR ERV1 -259 2179 743 424 337 61 4 chr5 35412490 35412754 -167672778 - MER110 LTR ERV1 -26 465 187 254 231 9 111 chr5 35412828 35412936 -167672596 - MER110A LTR ERV1 -298 170 74 229 65 0 43 chr5 35413134 35413180 -167672352 + (TG)n Simple_repeat Simple_repeat 2 45 0 344 119 17 0 chr5 35414130 35414189 -167671343 + (TA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr5 35414916 35414937 -167670595 + AT_rich Low_complexity Low_complexity 1 21 0 31 82 0 0 chr5 35415358 35415431 -167670101 + AT_rich Low_complexity Low_complexity 1 73 0 366 334 54 49 chr5 35416646 35417019 -167668513 + L1ME LINE L1 4348 4722 -1424 287 295 78 61 chr5 35417218 35417838 -167667694 + L1ME LINE L1 5290 5918 -252 225 300 118 39 chr5 35418013 35418293 -167667239 + L1MC/D LINE L1 5296 5597 -2211 2856 6 0 3 chr5 35418391 35418710 -167666822 + AluYb8 SINE Alu 1 318 0 243 88 0 0 chr5 35419291 35419325 -167666207 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr5 35419365 35419387 -167666145 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 35419560 35419581 -167665951 + AT_rich Low_complexity Low_complexity 1 21 0 2008 139 7 3 chr5 35419724 35420034 -167665498 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr5 35420464 35420486 -167665046 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 35420579 35420602 -167664930 + AT_rich Low_complexity Low_complexity 1 23 0 1293 269 98 44 chr5 35420835 35421460 -167664072 + L1ME LINE L1 3855 4564 -1582 2519 138 24 12 chr5 35421460 35421879 -167663653 + MSTA LTR MaLR 5 428 0 1293 269 98 44 chr5 35421879 35422337 -167663195 + L1ME LINE L1 4564 4996 -1150 790 235 184 27 chr5 35422633 35423007 -167662525 + L1ME LINE L1 5329 5761 -403 4509 157 86 39 chr5 35423072 35423428 -167662104 + L1MC1 LINE L1 5283 5621 -712 1855 191 57 24 chr5 35423428 35423846 -167661686 - MSTB1 LTR MaLR 0 432 1 4509 157 86 39 chr5 35423846 35424493 -167661039 + L1MC1 LINE L1 5621 6333 0 329 0 0 0 chr5 35424971 35425009 -167660523 - L1P1 LINE L1 -621 5534 5497 275 0 0 0 chr5 35425010 35425050 -167660482 + L1PA2 LINE L1 6116 6155 0 479 289 191 33 chr5 35425304 35425671 -167659861 - L2 LINE L2 0 3313 2889 27 29 0 0 chr5 35425752 35425786 -167659746 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 35426534 35426557 -167658975 + AT_rich Low_complexity Low_complexity 1 23 0 1530 198 16 29 chr5 35627282 35627596 -167457936 - AluJb SINE Alu -2 310 1 1081 256 100 90 chr5 35627651 35628230 -167457302 + MLT1E LTR MaLR 4 588 -5 226 254 57 49 chr5 35629566 35629688 -167455844 - MLT1E1 LTR MaLR -522 132 10 270 67 17 50 chr5 35630086 35630146 -167455386 + (GGGTG)n Simple_repeat Simple_repeat 4 61 0 230 123 88 0 chr5 35630822 35630879 -167454653 - L1MCa LINE L1 -4362 2064 2003 2182 102 10 3 chr5 35631045 35631339 -167454193 + AluSx SINE Alu 1 296 -16 387 305 125 27 chr5 35631340 35631644 -167453888 + L2 LINE L2 2742 3063 -209 312 285 122 28 chr5 35631723 35631937 -167453595 - L2 LINE L2 -825 2489 2256 216 311 41 16 chr5 35632046 35632168 -167453364 + L2 LINE L2 2152 2276 -1038 235 310 0 0 chr5 35632777 35632922 -167452610 + C-rich Low_complexity Low_complexity 1 145 0 * 417 151 21 65 chr5 35632817 35633003 -167452529 + (CCA)n Simple_repeat Simple_repeat 1 178 0 314 114 9 48 chr5 35633004 35633109 -167452423 + (CACCC)n Simple_repeat Simple_repeat 1 101 0 13332 183 25 16 chr5 35633413 35635829 -167449703 - L1P5 LINE L1 -424 6378 3925 2275 78 17 3 chr5 35635829 35636123 -167449409 - AluSc SINE Alu -11 298 1 13332 183 25 16 chr5 35636123 35636893 -167448639 - L1P5 LINE L1 -2877 3925 3163 358 238 2 9 chr5 35636896 35637005 -167448527 - L1P5 LINE L1 -4894 1903 1782 13853 27 1 1 chr5 35637021 35639327 -167446205 - L1PA3 LINE L1 -1 6154 3844 5217 107 8 0 chr5 35639795 35640503 -167445029 - L1PA8 LINE L1 0 6172 5459 1843 136 7 0 chr5 35640757 35641036 -167444496 - AluY SINE Alu -30 281 1 453 276 132 72 chr5 35641471 35641819 -167443713 - Charlie2a DNA MER1_type -583 2279 1911 243 316 36 14 chr5 35641848 35641987 -167443545 - Charlie2a DNA MER1_type -1059 1803 1662 1727 157 0 14 chr5 35642111 35642442 -167443090 + AluSx SINE Alu 3 329 0 293 276 38 0 chr5 35642628 35642733 -167442799 + MLT1E3 LTR MaLR 1 109 -545 619 248 124 58 chr5 35642786 35643214 -167442318 + MLT1E3 LTR MaLR 169 624 0 5295 101 7 0 chr5 35645963 35646675 -167438857 - L1PA8 LINE L1 0 6172 5456 181 75 50 25 chr5 35648578 35648618 -167436914 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 1336 269 12 7 chr5 35648767 35649158 -167436374 - L1MC1 LINE L1 -1 6343 5961 4588 198 38 24 chr5 35649184 35650694 -167434838 - L1MA8 LINE L1 -25 6266 4731 296 356 27 0 chr5 35650731 35650877 -167434655 - L1MCa LINE L1 -6271 155 6 1092 280 10 14 chr5 35651745 35652034 -167433498 - AluJb SINE Alu -14 288 1 1194 270 13 18 chr5 35654093 35654478 -167431054 - L1MC1 LINE L1 -5 6328 5946 4007 203 27 51 chr5 35654497 35655766 -167429766 - L1MA8 LINE L1 -26 6265 5032 1252 233 0 24 chr5 35656631 35656923 -167428609 - AluJb SINE Alu -23 289 5 2090 131 0 7 chr5 35659015 35659312 -167426220 + AluSc SINE Alu 1 295 -14 356 214 34 11 chr5 35659731 35659820 -167425712 - L1PB3 LINE L1 0 6154 6064 3897 185 33 35 chr5 35660023 35660996 -167424536 - L1PB3 LINE L1 -27 6127 5157 22 0 0 0 chr5 35661592 35661614 -167423918 + AT_rich Low_complexity Low_complexity 1 22 0 1591 195 3 0 chr5 35662021 35662303 -167423229 - AluJb SINE Alu -29 283 1 272 195 153 17 chr5 35662369 35662487 -167423045 - Charlie7 DNA MER1_type -2456 156 23 807 148 8 0 chr5 35662847 35662975 -167422557 - AluSq/x SINE Alu -184 129 1 1669 167 0 30 chr5 35663199 35663518 -167422014 + AluSx SINE Alu 3 312 0 261 268 41 0 chr5 35663731 35663828 -167421704 + MLT1E3 LTR MaLR 7 107 -547 482 244 89 69 chr5 35663953 35664314 -167421218 + MLT1E3 LTR MaLR 257 624 0 394 308 8 0 chr5 35666210 35666340 -167419192 - Charlie2 DNA MER1_type -836 2026 1896 268 222 167 48 chr5 35666559 35666685 -167418847 + MLT1E3 LTR MaLR 484 624 0 5198 103 13 3 chr5 35669436 35670141 -167415391 - L1PA8 LINE L1 -2 6170 5459 566 259 134 70 chr5 35670831 35671190 -167414342 - Charlie2 DNA MER1_type -585 2277 1896 215 146 62 0 chr5 35671909 35671957 -167413575 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1280 260 15 5 chr5 35672118 35672479 -167413053 - L1MC1 LINE L1 -17 6316 5960 4240 206 41 24 chr5 35672504 35674013 -167411519 - L1MA8 LINE L1 -25 6266 4731 294 322 41 14 chr5 35674050 35674196 -167411336 - L1MCa LINE L1 -6271 155 6 1207 247 36 4 chr5 35675056 35675335 -167410197 - AluJb SINE Alu -14 288 1 10926 191 10 26 chr5 35675912 35676574 -167408958 - L1P5 LINE L1 -545 6322 5650 2328 94 7 0 chr5 35676574 35676882 -167408650 + AluY SINE Alu 1 310 -1 10926 191 10 26 chr5 35676882 35678986 -167406546 - L1P5 LINE L1 -1217 5650 3606 3255 174 18 3 chr5 35678988 35679654 -167405878 - L1P5 LINE L1 -4796 2067 1392 313 236 11 11 chr5 35679678 35679767 -167405765 - L1P5 LINE L1 -6694 169 81 415 235 0 0 chr5 35679931 35680016 -167405516 - AluSg/x SINE Alu -23 286 202 301 242 55 23 chr5 35680911 35681039 -167404493 + MLT1E1 LTR MaLR 1 132 -522 230 232 24 49 chr5 35681070 35681152 -167404380 + MLT1E1 LTR MaLR 172 251 -373 398 103 29 0 chr5 35684373 35684441 -167401091 + CT-rich Low_complexity Low_complexity 2 71 0 495 166 0 35 chr5 35684444 35684613 -167400919 + C-rich Low_complexity Low_complexity 2 164 0 2073 141 13 0 chr5 35684616 35684921 -167400611 - AluSx SINE Alu -3 309 1 412 283 147 35 chr5 35685340 35685686 -167399846 - Charlie2a DNA MER1_type -582 2280 1896 273 323 15 0 chr5 35685704 35685837 -167399695 - Charlie2a DNA MER1_type -1064 1798 1664 2230 79 11 0 chr5 35686323 35686603 -167398929 + AluSc SINE Alu 12 294 -15 2225 85 11 0 chr5 35686605 35686924 -167398608 + AluY SINE Alu 1 322 0 283 281 59 22 chr5 35688288 35688423 -167397109 - MLT1E3 LTR MaLR -330 294 155 312 189 0 0 chr5 35689114 35689188 -167396344 - L1PB3 LINE L1 0 6154 6081 22 56 0 0 chr5 35689333 35689369 -167396163 + AT_rich Low_complexity Low_complexity 1 36 0 1960 172 16 3 chr5 35689372 35689745 -167395787 - L1PB3 LINE L1 -8 6146 5769 12409 191 24 18 chr5 35689770 35690133 -167395399 - L1PB1 LINE L1 -5 7584 7225 279 0 0 0 chr5 35690133 35690164 -167395368 + (CA)n Simple_repeat Simple_repeat 2 32 0 12409 191 24 18 chr5 35690164 35690226 -167395306 - L1PB1 LINE L1 -364 7225 7165 2477 85 0 0 chr5 35690226 35690531 -167395001 - AluY SINE Alu -6 305 1 12409 191 24 18 chr5 35690531 35692957 -167392575 - L1PB1 LINE L1 -424 7165 4713 2340 75 14 3 chr5 35692957 35693252 -167392280 - AluSc SINE Alu -11 298 1 12409 191 24 18 chr5 35693252 35694022 -167391510 - L1PB1 LINE L1 -2876 4713 3950 539 219 12 69 chr5 35694029 35694150 -167391382 - L1PB1 LINE L1 -4894 2690 2593 2752 28 0 0 chr5 35694150 35694473 -167391059 - L1PA2 LINE L1 -5 6150 5828 539 219 12 69 chr5 35694473 35694610 -167390922 - L1PB1 LINE L1 -4991 2593 2450 4053 269 30 31 chr5 35694822 35696092 -167389440 - L1PB1 LINE L1 -5106 2478 155 337 96 64 85 chr5 35696099 35696193 -167389339 - L1P5 LINE L1 -324 5827 5736 2479 58 0 3 chr5 35696193 35696502 -167389030 - AluY SINE Alu -3 308 1 831 169 19 0 chr5 35696505 35696659 -167388873 - L1PB1 LINE L1 -7416 165 9 3519 214 29 21 chr5 35696662 35698291 -167387241 - L1P5 LINE L1 -388 5766 4127 1361 212 22 19 chr5 35698299 35698658 -167386874 - L1MC1 LINE L1 -16 6317 5958 3514 206 30 36 chr5 35698693 35700239 -167385293 - L1MA8 LINE L1 -25 6266 4726 470 250 20 20 chr5 35700268 35700317 -167385215 - L1MCa LINE L1 -6270 156 108 2273 97 0 35 chr5 35700317 35700628 -167384904 - AluSp SINE Alu -13 300 1 470 250 20 20 chr5 35700628 35700730 -167384802 - L1MCa LINE L1 -6317 109 5 234 234 73 95 chr5 35703741 35703848 -167381684 - MLT1E1 LTR MaLR -520 134 29 2167 132 10 44 chr5 35703848 35704235 -167381297 + THE1C LTR MaLR 1 374 -1 234 234 73 95 chr5 35704235 35704264 -167381268 - MLT1E1 LTR MaLR -625 29 1 25 65 0 0 chr5 35704991 35705037 -167380495 + AT_rich Low_complexity Low_complexity 1 46 0 285 250 188 0 chr5 35706005 35706101 -167379431 - MIR3 SINE MIR -48 160 47 1289 224 45 25 chr5 35706586 35706944 -167378588 - MLT1A1 LTR MaLR 0 365 1 270 309 46 7 chr5 35707730 35707882 -167377650 - MER103 DNA DNA -7 159 2 610 293 112 5 chr5 35708443 35708658 -167376874 + MIR SINE MIR 23 260 -2 22 0 0 0 chr5 35708947 35708969 -167376563 + AT_rich Low_complexity Low_complexity 1 22 0 1486 77 0 0 chr5 35708969 35709151 -167376381 + AluSq SINE Alu 1 182 -131 270 71 0 0 chr5 35709153 35709195 -167376337 + AluSq SINE Alu 259 300 -2 3077 166 6 36 chr5 35709222 35709856 -167375676 - L1MB2 LINE L1 -8 6163 5549 25 65 0 0 chr5 35710387 35710433 -167375099 + AT_rich Low_complexity Low_complexity 1 46 0 298 40 100 0 chr5 35710529 35710579 -167374953 - AluY SINE Alu -1 300 246 17610 109 36 22 chr5 35711347 35712629 -167372903 + Charlie3 DNA MER1_type 4 1268 -1438 1570 114 5 0 chr5 35712629 35712840 -167372692 - AluSg SINE Alu -98 212 1 17610 109 36 22 chr5 35712840 35714224 -167371308 + Charlie3 DNA MER1_type 1268 2705 -1 2219 92 0 3 chr5 35714861 35715153 -167370379 - AluSc SINE Alu -18 291 1 1358 170 112 8 chr5 35715230 35715489 -167370043 + AluJb SINE Alu 1 286 -26 213 39 0 0 chr5 35715489 35715515 -167370017 + (CA)n Simple_repeat Simple_repeat 2 27 0 2632 42 0 3 chr5 35715732 35716040 -167369492 - AluY SINE Alu -4 307 1 299 167 0 28 chr5 35716208 35716280 -167369252 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 359 238 12 0 chr5 35716767 35716849 -167368683 - MER69A DNA AcHobo -3 174 92 2667 183 13 45 chr5 35716849 35717445 -167368087 + MER6A DNA MER2_type 1 577 -28 264 242 22 22 chr5 35717457 35717548 -167367984 - MER69A DNA AcHobo -84 93 3 281 281 184 18 chr5 35717549 35717663 -167367869 + L2 LINE L2 3181 3313 0 21 71 0 0 chr5 35718040 35718082 -167367450 + AT_rich Low_complexity Low_complexity 1 42 0 2219 109 3 10 chr5 35718310 35718621 -167366911 - AluSc SINE Alu 0 309 1 22 0 0 0 chr5 35718814 35718836 -167366696 + AT_rich Low_complexity Low_complexity 1 22 0 575 228 108 12 chr5 35719749 35719916 -167365616 - MER5A DNA MER1_type 0 189 7 1065 235 71 10 chr5 35720157 35720451 -167365081 - L1MD2 LINE L1 -71 6288 5977 4432 95 9 15 chr5 35721543 35722225 -167363307 - L1PB2 LINE L1 0 6151 5474 201 213 213 0 chr5 35723527 35723588 -167361944 - L2 LINE L2 -9 3304 3231 219 311 41 16 chr5 35724484 35724606 -167360926 - L2 LINE L2 -1038 2276 2152 316 280 122 28 chr5 35724715 35724929 -167360603 + L2 LINE L2 2256 2489 -825 546 300 87 41 chr5 35724992 35725313 -167360219 - L2 LINE L2 -186 3086 2744 2248 109 7 0 chr5 35725313 35725607 -167359925 - AluSx SINE Alu -16 296 1 546 300 87 41 chr5 35725607 35725757 -167359775 - L2 LINE L2 -528 2744 2602 322 364 7 13 chr5 35726307 35726461 -167359071 + LTR33 LTR ERVL 30 182 -339 318 240 89 113 chr5 35726930 35727222 -167358310 + LTR33A LTR ERVL 226 510 -13 290 352 78 17 chr5 35727293 35727472 -167358060 + MIR SINE MIR 57 246 -16 480 111 0 0 chr5 35728410 35728482 -167357050 + (TA)n Simple_repeat Simple_repeat 1 72 0 1339 171 91 23 chr5 35728503 35728767 -167356765 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 35730109 35730131 -167355401 + AT_rich Low_complexity Low_complexity 1 22 0 293 276 58 35 chr5 35730709 35730796 -167354736 + L2 LINE L2 3151 3239 -33 735 268 22 26 chr5 35730993 35731224 -167354308 + MIR SINE MIR 28 257 -5 23 54 0 0 chr5 35732334 35732371 -167353161 + AT_rich Low_complexity Low_complexity 1 37 0 424 216 9 18 chr5 35732376 35732487 -167353045 - L1MA10 LINE L1 -7 6327 6218 4723 98 42 0 chr5 35732902 35733585 -167351947 + L1PA10 LINE L1 5445 6156 -12 1322 146 27 6 chr5 35733992 35734392 -167351140 - L1PA15 LINE L1 -674 5491 5082 * 2282 126 26 2 chr5 35734391 35734972 -167350560 + L1PA15 LINE L1 5504 6164 -1 363 60 0 0 chr5 35735964 35736014 -167349518 + (CA)n Simple_repeat Simple_repeat 1 50 0 204 222 69 28 chr5 35736402 35736474 -167349058 + L2 LINE L2 2564 2638 -676 23 0 0 0 chr5 35737884 35737907 -167347625 + AT_rich Low_complexity Low_complexity 1 23 0 558 258 101 35 chr5 35737918 35738260 -167347272 + MLT1G3 LTR MaLR 12 394 -201 410 271 54 30 chr5 35738475 35738641 -167346891 + MIR SINE MIR 76 245 -17 190 244 89 0 chr5 35739039 35739084 -167346448 - L2 LINE L2 0 3272 3224 966 209 15 0 chr5 35739186 35739382 -167346150 + MER58A DNA MER1_type 11 209 -15 202 356 171 0 chr5 35739402 35739548 -167345984 + L3 LINE CR1 1066 1236 -341 341 288 77 86 chr5 35739664 35739897 -167345635 + L1MC4a LINE L1 5595 5825 -1983 6718 16 3 0 chr5 35739902 35740675 -167344857 + L1PA3 LINE L1 5381 6155 0 23 0 0 0 chr5 35740754 35740777 -167344755 + AT_rich Low_complexity Low_complexity 1 23 0 403 247 57 46 chr5 35740796 35740990 -167344542 - MLT1J LTR MaLR -7 504 309 30 69 0 0 chr5 35741404 35741462 -167344070 + AT_rich Low_complexity Low_complexity 1 58 0 33 0 0 0 chr5 35741509 35741542 -167343990 + AT_rich Low_complexity Low_complexity 1 33 0 206 125 0 25 chr5 35741597 35741637 -167343895 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 604 324 47 52 chr5 35741646 35742241 -167343291 - Charlie7 DNA MER1_type -2000 612 21 293 252 53 12 chr5 35742284 35742416 -167343116 - MLT2F LTR ERVL 0 663 269 578 192 8 45 chr5 35742601 35742755 -167342777 - MLT1E3 LTR MaLR -399 255 55 519 259 7 22 chr5 35742767 35742906 -167342626 - MLT2F LTR ERVL -526 137 1 351 301 111 13 chr5 35743859 35744012 -167341520 + MIR SINE MIR 89 256 -6 319 403 19 13 chr5 35744237 35744391 -167341141 - MIR3 SINE MIR -19 189 35 477 0 0 0 chr5 35744534 35744587 -167340945 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 3443 189 69 5 chr5 35745803 35746571 -167338961 + Tigger6a DNA MER2_type 2 818 -265 406 268 79 53 chr5 35747075 35747430 -167338102 + MLT1E3 LTR MaLR 261 624 0 282 337 24 0 chr5 35748824 35748907 -167336625 - MER91B DNA MER1_type -6 184 100 546 210 26 62 chr5 35749183 35749268 -167336264 - MER96B DNA MER1_type? -229 188 101 3887 142 29 18 chr5 35749268 35749949 -167335583 + L1MC1 LINE L1 5639 6327 -6 546 210 26 62 chr5 35749949 35750058 -167335474 - MER96B DNA MER1_type? -316 101 1 663 226 32 16 chr5 35750374 35750560 -167334972 + MER53 DNA DNA 1 189 0 2217 80 37 0 chr5 35750836 35751135 -167334397 - AluSg SINE Alu 0 310 1 2325 64 0 3 chr5 35751843 35752138 -167333394 - AluY SINE Alu -17 294 1 183 42 0 0 chr5 35753336 35753360 -167332172 + (CAATT)n Simple_repeat Simple_repeat 5 28 0 29 28 0 0 chr5 35756057 35756093 -167329439 + AT_rich Low_complexity Low_complexity 1 36 0 206 344 44 0 chr5 35756249 35756339 -167329193 - MIR3 SINE MIR -6 202 109 22 0 0 0 chr5 35757222 35757244 -167328288 + AT_rich Low_complexity Low_complexity 1 22 0 483 60 0 0 chr5 35757851 35757918 -167327614 + (GA)n Simple_repeat Simple_repeat 2 68 0 921 228 55 14 chr5 35758299 35758518 -167327014 - MIR SINE MIR -29 233 6 486 120 0 0 chr5 35758673 35758748 -167326784 + (TCTG)n Simple_repeat Simple_repeat 2 76 0 21 36 0 0 chr5 35758780 35758808 -167326724 + AT_rich Low_complexity Low_complexity 1 28 0 203 218 119 89 chr5 35759281 35759382 -167326150 - MIR3 SINE MIR -4 204 101 1027 175 34 0 chr5 35760008 35760214 -167325318 - MER20 DNA MER1_type 0 219 7 287 286 97 61 chr5 35760473 35760669 -167324863 - MIR SINE MIR -19 243 41 314 251 123 103 chr5 35760690 35760933 -167324599 + MIR SINE MIR 10 257 -5 398 316 19 26 chr5 35760988 35761143 -167324389 + MIR SINE MIR 37 190 -72 218 222 0 0 chr5 35761170 35761215 -167324317 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2303 88 0 0 chr5 35761679 35761964 -167323568 + AluSq SINE Alu 1 285 -28 360 59 0 0 chr5 35761964 35762015 -167323517 + (CCAA)n Simple_repeat Simple_repeat 2 52 0 201 39 0 0 chr5 35762138 35762164 -167323368 + (GA)n Simple_repeat Simple_repeat 2 27 0 290 371 88 34 chr5 35762404 35762698 -167322834 - L2 LINE L2 -20 3252 2943 1710 164 46 9 chr5 35763414 35763743 -167321789 - MER58B DNA MER1_type 0 341 1 228 315 34 0 chr5 35764969 35765058 -167320474 - Charlie7 DNA MER1_type -2516 96 5 21 36 0 0 chr5 35766117 35766145 -167319387 + AT_rich Low_complexity Low_complexity 1 28 0 1743 122 11 36 chr5 35767385 35767663 -167317869 - AluSg SINE Alu -10 300 30 1004 198 0 0 chr5 35768014 35768191 -167317341 - MER45A DNA AcHobo 0 178 2 2077 135 3 22 chr5 35768714 35769032 -167316500 + AluSx SINE Alu 1 312 0 2148 136 36 28 chr5 35770109 35770470 -167315062 + THE1B LTR MaLR 1 364 0 231 146 0 0 chr5 35773606 35773647 -167311885 + (CAT)n Simple_repeat Simple_repeat 2 42 0 2169 107 67 17 chr5 35774103 35774459 -167311073 - THE1C LTR MaLR -1 374 1 24 53 0 0 chr5 35775426 35775464 -167310068 + AT_rich Low_complexity Low_complexity 1 38 0 221 215 46 0 chr5 35777926 35777991 -167307541 + (CCCCAA)n Simple_repeat Simple_repeat 5 72 0 3389 306 87 32 chr5 35777998 35778750 -167306782 - L2 LINE L2 -11 3302 2593 1754 172 0 36 chr5 35778750 35779058 -167306474 - AluJb SINE Alu -15 297 1 3389 306 87 32 chr5 35779058 35780229 -167305303 - L2 LINE L2 -720 2593 1269 780 318 159 10 chr5 35780646 35781042 -167304490 - L2 LINE L2 -2057 1257 803 23 0 0 0 chr5 35781919 35781942 -167303590 + AT_rich Low_complexity Low_complexity 1 23 0 28 71 0 0 chr5 35781973 35782029 -167303503 + AT_rich Low_complexity Low_complexity 1 56 0 42667 36 1 1 chr5 35782121 35788277 -167297255 - L1PA3 LINE L1 -1 6154 4 387 316 22 0 chr5 35788363 35788499 -167297033 + MER69A DNA AcHobo 39 177 0 897 118 7 78 chr5 35791308 35791461 -167294071 - AluSg/x SINE Alu -31 279 138 583 94 21 0 chr5 35792365 35792461 -167293071 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 289 304 45 54 chr5 35792666 35792890 -167292642 - L2 LINE L2 -215 3057 2836 240 325 31 62 chr5 35792943 35793103 -167292429 - L2 LINE L2 -610 2704 2550 22 35 0 0 chr5 35794285 35794314 -167291218 + AT_rich Low_complexity Low_complexity 1 29 0 184 330 110 11 chr5 35796030 35796121 -167289411 + MIR SINE MIR 22 121 -87 1879 193 10 56 chr5 35796132 35796542 -167288990 + MSTD LTR MaLR 6 396 0 213 121 0 0 chr5 35796707 35796740 -167288792 + (TC)n Simple_repeat Simple_repeat 2 34 0 680 290 82 90 chr5 35797969 35798263 -167287269 + L2 LINE L2 2472 2767 -546 1721 189 16 22 chr5 35798263 35798575 -167286957 - AluJb SINE Alu -2 310 1 680 290 82 90 chr5 35798575 35798630 -167286902 + L2 LINE L2 2767 2821 -492 1083 246 98 89 chr5 35798630 35799212 -167286320 + MLT1E LTR MaLR 4 590 -3 680 290 82 90 chr5 35799212 35799698 -167285834 + L2 LINE L2 2821 3310 -3 249 284 37 55 chr5 35799696 35799805 -167285727 + MIR3 SINE MIR 93 199 -9 * 696 189 41 18 chr5 35799958 35800090 -167285442 + MER3 DNA MER1_type 2 93 -69 1653 176 13 20 chr5 35800090 35800391 -167285141 - AluJo SINE Alu -9 303 5 696 189 41 18 chr5 35800391 35800427 -167285105 + MER3 DNA MER1_type 93 127 -35 342 342 52 19 chr5 35801314 35801469 -167284063 + MIR SINE MIR 24 183 -79 464 299 133 50 chr5 35801663 35801941 -167283591 + L2 LINE L2 3012 3312 -1 242 373 22 0 chr5 35803927 35804061 -167281471 + MLT1K LTR MaLR 157 293 -295 1140 209 141 15 chr5 35804243 35804697 -167280835 - L1MDa LINE L1 -4820 1720 1210 1995 212 163 55 chr5 35804735 35805430 -167280102 - L1MDa LINE L1 -5664 876 87 2862 102 23 16 chr5 35805430 35805796 -167279736 - L1PB1 LINE L1 0 6151 5780 954 27 41 0 chr5 35805796 35805942 -167279590 + (TCTA)n Simple_repeat Simple_repeat 1 152 0 2862 102 23 16 chr5 35805942 35806018 -167279514 - L1PB1 LINE L1 -371 5780 5706 1995 212 163 55 chr5 35806018 35806100 -167279432 - L1MDa LINE L1 -6453 87 15 2277 293 99 69 chr5 35806182 35806723 -167278809 - L1M4 LINE L1 -1163 4983 4459 1764 175 0 23 chr5 35806723 35807031 -167278501 - AluJb SINE Alu -11 301 1 2277 293 99 69 chr5 35807031 35807658 -167277874 - L1M4 LINE L1 -1687 4459 3852 631 226 0 0 chr5 35807658 35807815 -167277717 - FLAM_A SINE Alu 0 158 2 2277 293 99 69 chr5 35807815 35808872 -167276660 - L1M4 LINE L1 -2294 3852 2690 2686 55 0 0 chr5 35809697 35810009 -167275523 - AluSp SINE Alu -1 312 1 294 324 150 45 chr5 35810243 35810704 -167274828 + L2 LINE L2 1656 2067 -1247 2569 55 0 0 chr5 35810704 35811015 -167274517 - AluY SINE Alu 0 311 1 294 324 150 45 chr5 35811015 35811445 -167274087 + L2 LINE L2 2067 2641 -673 2141 41 60 0 chr5 35811925 35812227 -167273305 + AluY SINE Alu 1 318 0 393 22 0 0 chr5 35812361 35812407 -167273125 + (CTAAT)n Simple_repeat Simple_repeat 4 49 0 374 360 70 19 chr5 35813302 35813516 -167272016 - L3 LINE CR1 -400 1177 953 28 29 0 0 chr5 35813882 35813917 -167271615 + AT_rich Low_complexity Low_complexity 1 35 0 330 237 85 108 chr5 35814101 35814396 -167271136 + MLT1I LTR MaLR 29 316 -93 2314 114 7 0 chr5 35815117 35815425 -167270107 + AluSg SINE Alu 1 310 0 243 270 48 0 chr5 35815903 35815966 -167269566 + L2 LINE L2 3239 3304 -9 22 56 0 0 chr5 35816754 35816790 -167268742 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 35817138 35817168 -167268364 + AT_rich Low_complexity Low_complexity 1 30 0 3491 82 4 0 chr5 35817222 35817700 -167267832 + L1PA7 LINE L1 5675 6154 0 28 91 0 0 chr5 35818245 35818322 -167267210 + AT_rich Low_complexity Low_complexity 1 77 0 2541 49 0 0 chr5 35819236 35819540 -167265992 - AluY SINE Alu -7 304 1 633 158 0 0 chr5 35819555 35819675 -167265857 + CT-rich Low_complexity Low_complexity 2 121 0 221 171 0 0 chr5 35820545 35820613 -167264919 + (TA)n Simple_repeat Simple_repeat 1 68 0 1962 130 4 0 chr5 35821668 35821944 -167263588 + AluSx SINE Alu 1 277 -35 3110 218 15 62 chr5 35823348 35824043 -167261489 + L1MC3 LINE L1 5592 6233 -1552 562 113 94 9 chr5 35824043 35824149 -167261383 + L1PB2 LINE L1 6030 6144 -7 3110 218 15 62 chr5 35824149 35824384 -167261148 + L1MC3 LINE L1 6233 6478 -1307 489 244 171 49 chr5 35824393 35824639 -167260893 + MER57B LTR ERV1 1 276 -126 2030 133 29 32 chr5 35824746 35825122 -167260410 + THE1C LTR MaLR 1 375 0 2270 44 6 72 chr5 35825145 35825466 -167260066 + AluY SINE Alu 1 300 -11 346 189 0 0 chr5 35825541 35825615 -167259917 + MER57A LTR ERV1 330 403 0 1784 233 45 4 chr5 35825615 35826100 -167259432 + L1MC3 LINE L1 6485 6989 -796 1048 115 0 30 chr5 35826102 35826267 -167259265 + AluSg/x SINE Alu 153 312 0 2299 179 107 10 chr5 35826268 35826848 -167258684 + L1MC3 LINE L1 6980 7615 -170 3453 180 55 25 chr5 35827622 35828354 -167257178 + MER21B LTR ERV1 1 754 -109 1223 275 124 28 chr5 35828779 35829318 -167256214 + MLT1F1 LTR MaLR 3 567 0 1486 128 78 101 chr5 35829499 35829805 -167255727 + AluY SINE Alu 5 303 -8 266 292 31 54 chr5 35831166 35831296 -167254236 + L2 LINE L2 2956 3082 -190 213 226 38 0 chr5 35831515 35831568 -167253964 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 862 301 30 15 chr5 35832085 35832483 -167253049 - MER90 LTR ERV1 -9 566 163 2101 103 3 10 chr5 35833797 35834087 -167251445 + AluSq SINE Alu 1 288 -25 24 0 0 0 chr5 35834204 35834228 -167251304 + AT_rich Low_complexity Low_complexity 1 24 0 201 147 0 0 chr5 35834774 35834808 -167250724 + (T)n Simple_repeat Simple_repeat 1 34 0 2371 131 35 8 chr5 35835936 35836365 -167249167 - Tigger2 DNA MER2_type 0 2718 4 561 290 0 0 chr5 35836925 35837049 -167248483 - L2 LINE L2 -4 3309 3186 2338 78 0 3 chr5 35837453 35837749 -167247783 - AluY SINE Alu -16 295 1 182 190 0 17 chr5 35837941 35837999 -167247533 + CT-rich Low_complexity Low_complexity 4 60 0 222 205 0 0 chr5 35839661 35839700 -167245832 + (TG)n Simple_repeat Simple_repeat 1 39 0 265 373 130 22 chr5 35840497 35840819 -167244713 - L2 LINE L2 -1 3271 2915 22 35 0 0 chr5 35840963 35840992 -167244540 + AT_rich Low_complexity Low_complexity 1 29 0 308 243 58 48 chr5 35842326 35842429 -167243103 - MIR SINE MIR -48 214 111 205 179 0 0 chr5 35842606 35842645 -167242887 + T-rich Low_complexity Low_complexity 2 40 0 248 252 135 9 chr5 35843562 35843673 -167241859 - L2 LINE L2 -9 3263 3139 261 225 62 0 chr5 35844658 35844738 -167240794 - L1MC4 LINE L1 -1344 6698 6614 489 125 0 0 chr5 35844783 35844871 -167240661 + (TA)n Simple_repeat Simple_repeat 1 88 0 451 278 61 28 chr5 35846860 35847072 -167238460 + L1MB8 LINE L1 5947 6165 -13 373 234 117 45 chr5 35847082 35847236 -167238296 + L1MEd LINE L1 561 725 -5394 199 122 0 49 chr5 35847917 35847958 -167237574 + MIR SINE MIR 41 79 -129 710 259 42 36 chr5 35847967 35848160 -167237372 + MIR SINE MIR 48 241 -21 505 292 60 0 chr5 35848433 35848601 -167236931 + L2 LINE L2 2550 2727 -587 274 347 48 16 chr5 35849308 35849432 -167236100 + MIR SINE MIR 20 147 -61 390 260 24 55 chr5 35849711 35849838 -167235694 + MIR SINE MIR 31 153 -109 652 188 29 7 chr5 35849977 35850115 -167235417 - L1M1 LINE L1 -7416 149 9 524 140 11 0 chr5 35850153 35850246 -167235286 + GA-rich Low_complexity Low_complexity 1 94 0 656 184 32 130 chr5 35850296 35850417 -167235115 + L1MC/D LINE L1 5215 5346 -1041 2210 99 0 0 chr5 35850417 35850709 -167234823 + AluY SINE Alu 3 294 -17 656 184 32 130 chr5 35850709 35850992 -167234540 + L1MC/D LINE L1 5346 5571 -816 304 230 236 24 chr5 35851215 35851380 -167234152 - MIR SINE MIR 0 262 63 186 43 0 0 chr5 35851900 35851923 -167233609 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr5 35852896 35852926 -167232606 + AT_rich Low_complexity Low_complexity 1 30 0 201 147 0 0 chr5 35853235 35853269 -167232263 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 527 283 169 5 chr5 35855677 35855861 -167229671 + MIR SINE MIR 8 221 -41 452 296 24 19 chr5 35856804 35857010 -167228522 + L1M4 LINE L1 16 222 -6320 259 261 69 119 chr5 35857208 35857587 -167227945 + L1M4 LINE L1 515 874 -5668 1049 88 0 22 chr5 35857957 35858139 -167227393 + (TA)n Simple_repeat Simple_repeat 1 178 0 335 208 0 78 chr5 35858147 35858224 -167227308 - FLAM SINE Alu -13 120 50 239 148 45 0 chr5 35858227 35858315 -167227217 + (TA)n Simple_repeat Simple_repeat 1 92 0 674 177 0 48 chr5 35858317 35858441 -167227091 - FLAM_C SINE Alu -25 118 1 212 303 232 26 chr5 35858830 35859097 -167226435 - L2 LINE L2 -546 2768 2447 5375 161 21 9 chr5 35859119 35860218 -167225314 - L1MA8 LINE L1 -77 6214 5101 1654 182 7 3 chr5 35860603 35860894 -167224638 - AluJo SINE Alu -18 294 3 515 252 67 7 chr5 35861030 35861277 -167224255 - L1MC/D LINE L1 -340 5781 5572 2389 85 0 0 chr5 35861537 35861832 -167223700 - AluSg SINE Alu -15 295 1 415 257 76 35 chr5 35863621 35863668 -167221864 - MER5B DNA MER1_type 0 178 134 243 61 0 0 chr5 35863668 35863701 -167221831 + (TAA)n Simple_repeat Simple_repeat 1 33 0 415 257 76 35 chr5 35863701 35863824 -167221708 - MER5B DNA MER1_type -44 134 1 220 369 39 0 chr5 35864997 35865100 -167220432 + L2 LINE L2 2552 2658 -656 3012 195 39 60 chr5 35865138 35865888 -167219644 - L1MD2 LINE L1 -20 6339 5606 328 331 78 35 chr5 35865910 35866241 -167219291 + L2 LINE L2 2712 3048 -224 498 239 44 9 chr5 35866411 35866524 -167219008 + MLT1E LTR MaLR 86 202 -391 384 190 0 0 chr5 35866529 35866608 -167218924 + GA-rich Low_complexity Low_complexity 1 79 0 1235 257 22 19 chr5 35866614 35866929 -167218603 + MLT1E LTR MaLR 209 524 -69 2382 85 3 0 chr5 35868055 35868349 -167217183 - AluSg SINE Alu -14 296 2 21 0 0 0 chr5 35868675 35868696 -167216836 + AT_rich Low_complexity Low_complexity 1 21 0 454 116 52 12 chr5 35868889 35869061 -167216471 + (TA)n Simple_repeat Simple_repeat 2 180 0 9472 194 12 22 chr5 35869135 35870435 -167215097 + L1PA15 LINE L1 3304 4615 -1550 2051 144 5 44 chr5 35870435 35870824 -167214708 - THE1C LTR MaLR 0 375 2 9472 194 12 22 chr5 35870824 35871531 -167214001 + L1PA15 LINE L1 4615 5327 -838 2192 113 0 0 chr5 35871531 35871824 -167213708 + AluSg SINE Alu 1 293 -17 9472 194 12 22 chr5 35871824 35872657 -167212875 + L1PA15 LINE L1 5327 6161 -4 233 374 22 0 chr5 35873427 35873518 -167212014 - L2 LINE L2 -5 3308 3216 211 381 69 11 chr5 35873729 35873918 -167211614 - L2 LINE L2 -340 2974 2775 273 182 45 136 chr5 35874394 35874526 -167211006 - MLT1L LTR MaLR -279 336 217 2348 94 0 16 chr5 35875000 35875307 -167210225 + AluSg SINE Alu 2 303 -7 27 29 0 0 chr5 35875527 35875561 -167209971 + AT_rich Low_complexity Low_complexity 1 34 0 2580 82 6 6 chr5 35877386 35877740 -167207792 - L1PA8 LINE L1 -1 6171 5818 2140 94 0 7 chr5 35877740 35878047 -167207485 + L1P LINE L1 4464 4768 -1378 1043 311 102 78 chr5 35878516 35878694 -167206838 - L3 LINE CR1 -161 1416 1244 953 324 30 34 chr5 35878694 35879160 -167206372 + LTR16B LTR ERVL 1 464 0 1043 311 102 78 chr5 35879160 35879904 -167205628 - L3 LINE CR1 -333 1244 472 198 193 0 0 chr5 35880711 35880768 -167204764 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 23 0 0 chr5 35880770 35880813 -167204719 + MADE1 DNA Mariner 3 45 -35 330 206 33 87 chr5 35880831 35880923 -167204609 + L1ME1 LINE L1 6012 6098 -68 24 0 0 0 chr5 35881077 35881101 -167204431 + AT_rich Low_complexity Low_complexity 1 24 0 2145 111 7 3 chr5 35881289 35881586 -167203946 - AluSq SINE Alu -15 298 1 980 242 89 3 chr5 35881612 35881926 -167203606 - L1ME2 LINE L1 -9 6155 5815 * 6063 137 17 1 chr5 35881918 35883715 -167201817 - L1PA11 LINE L1 -1 6876 5061 3031 262 67 58 chr5 35883720 35884165 -167201367 - L1M4 LINE L1 -2037 4109 3670 1879 199 52 40 chr5 35884165 35884662 -167200870 + MLT1D LTR MaLR 3 505 0 3031 262 67 58 chr5 35884662 35886064 -167199468 - L1M4 LINE L1 -2476 3670 2245 726 143 48 7 chr5 35886068 35886215 -167199317 + L1MA4 LINE L1 6015 6167 -133 6133 6 0 0 chr5 35886215 35886899 -167198633 + L1PA2 LINE L1 5469 6154 -1 631 224 39 0 chr5 35886923 35887079 -167198453 + L1MA4 LINE L1 6135 6296 -4 5352 209 9 2 chr5 35887138 35888294 -167197238 - L1PA11 LINE L1 -2864 3985 2821 2931 104 109 8 chr5 35888295 35888764 -167196768 - THE1C-int LTR MaLR -1064 516 1 1916 161 19 26 chr5 35888764 35889142 -167196390 - THE1C LTR MaLR 0 375 1 2403 232 21 10 chr5 35889142 35889749 -167195783 - L1PA11 LINE L1 -4212 2637 2024 303 287 73 49 chr5 35889753 35889917 -167195615 - L1MC4 LINE L1 -1296 6746 6579 204 200 0 0 chr5 35889924 35889969 -167195563 + (TA)n Simple_repeat Simple_repeat 1 45 0 8266 126 7 2 chr5 35889972 35891183 -167194349 - L1PA12 LINE L1 -4872 2709 1493 1160 333 62 27 chr5 35891184 35892109 -167193423 - L1MEc LINE L1 -5365 1031 75 285 292 172 82 chr5 35892242 35892533 -167192999 - L3 LINE CR1 -207 1370 1054 2281 110 0 13 chr5 35892757 35893066 -167192466 - AluSx SINE Alu -7 305 1 350 349 63 66 chr5 35893235 35893567 -167191965 + L2 LINE L2 2932 3262 -10 211 306 16 0 chr5 35893579 35893641 -167191891 - MIR SINE MIR -122 140 78 880 108 24 12 chr5 35894822 35894989 -167190543 + CT-rich Low_complexity Low_complexity 3 171 0 350 246 222 33 chr5 35894989 35895334 -167190198 - L1MC4 LINE L1 -480 5641 5322 25 51 0 0 chr5 35895334 35895373 -167190159 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr5 35895610 35895650 -167189882 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 35895855 35895877 -167189655 + AT_rich Low_complexity Low_complexity 1 22 0 244 318 77 53 chr5 35895920 35896090 -167189442 - L2 LINE L2 -38 3275 3102 367 286 0 0 chr5 35896157 35896241 -167189291 - MLT1D LTR MaLR -414 91 8 22 0 0 0 chr5 35896707 35896729 -167188803 + AT_rich Low_complexity Low_complexity 1 22 0 1664 196 0 14 chr5 35897430 35897716 -167187816 + AluJo SINE Alu 1 282 -30 216 0 0 0 chr5 35897719 35897743 -167187789 + (TAA)n Simple_repeat Simple_repeat 2 25 0 303 282 36 18 chr5 35898140 35898250 -167187282 - HAL1 LINE L1 -1435 1072 961 851 143 0 0 chr5 35899186 35899312 -167186220 + FLAM_C SINE Alu 11 136 -7 225 253 81 35 chr5 35899913 35900000 -167185532 - MIR SINE MIR -98 164 74 23 54 0 0 chr5 35900235 35900272 -167185260 + AT_rich Low_complexity Low_complexity 1 37 0 205 270 18 0 chr5 35901278 35901389 -167184143 + CT-rich Low_complexity Low_complexity 1 113 0 852 243 67 67 chr5 35901647 35901968 -167183564 - L1ME LINE L1 -637 5529 5208 4441 167 9 14 chr5 35901968 35902754 -167182778 - LTR39 LTR ERV1 0 783 2 852 243 67 67 chr5 35902754 35902956 -167182576 - L1ME LINE L1 -958 5208 5008 2054 257 50 10 chr5 35902981 35903465 -167182067 + L1ME1 LINE L1 5561 6073 -93 2838 135 2 21 chr5 35903465 35903901 -167181631 + MSTA LTR MaLR 1 428 0 2054 257 50 10 chr5 35903901 35903995 -167181537 + L1ME1 LINE L1 6073 6162 -4 225 65 0 0 chr5 35905031 35905062 -167180470 + (TC)n Simple_repeat Simple_repeat 2 32 0 1588 190 54 12 chr5 35905259 35905590 -167179942 - MLT1A1 LTR MaLR -11 354 10 2483 106 22 11 chr5 35905947 35906307 -167179225 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr5 35906436 35906458 -167179074 + AT_rich Low_complexity Low_complexity 1 22 0 282 206 0 0 chr5 35907565 35907628 -167177904 + (TG)n Simple_repeat Simple_repeat 2 64 0 679 335 42 38 chr5 35908276 35908703 -167176829 + L1M3c LINE L1 1358 1786 -5710 2540 225 33 41 chr5 35908853 35909945 -167175587 + L1M3c LINE L1 1876 2975 -4521 2227 128 48 31 chr5 35909945 35910303 -167175229 + THE1B LTR MaLR 1 364 0 11460 94 11 4 chr5 35910303 35911872 -167173660 + THE1B-int LTR MaLR 1 1580 0 2209 107 57 28 chr5 35911872 35912226 -167173306 + THE1B LTR MaLR 1 364 0 2540 225 33 41 chr5 35912226 35912246 -167173286 + L1M3c LINE L1 2973 2925 -4571 357 24 0 0 chr5 35912246 35912288 -167173244 + (TA)n Simple_repeat Simple_repeat 1 42 0 2540 225 33 41 chr5 35912288 35912342 -167173190 + L1M3c LINE L1 2924 2977 -4519 3157 278 64 15 chr5 35912347 35913980 -167171552 + L1M3c LINE L1 2881 4612 -2953 7873 164 18 6 chr5 35914000 35916545 -167168987 - L1MA2 LINE L1 0 6304 3729 3772 222 31 60 chr5 35916550 35917002 -167168530 + L1M3c LINE L1 4618 5081 -2484 303 67 0 0 chr5 35917002 35917047 -167168485 + MADE1 DNA Mariner 1 45 -35 3772 222 31 60 chr5 35917047 35918315 -167167217 + L1M3c LINE L1 5081 6294 -1271 1290 71 0 30 chr5 35918318 35918487 -167167045 - AluY SINE Alu -147 164 1 248 185 19 0 chr5 35918488 35918542 -167166990 + L1MA9 LINE L1 6253 6307 -5 614 267 82 5 chr5 35918694 35918889 -167166643 - L1MEc LINE L1 -6155 241 32 345 200 148 9 chr5 35918936 35919051 -167166481 - LTR16C LTR ERVL -24 467 337 21 0 0 0 chr5 35919194 35919215 -167166317 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr5 35919352 35919398 -167166134 + AT_rich Low_complexity Low_complexity 1 46 0 834 296 119 74 chr5 35920385 35921353 -167164179 - L2 LINE L2 0 3313 2288 314 338 44 44 chr5 35921357 35921561 -167163971 - L2 LINE L2 -3103 211 8 1586 193 0 24 chr5 35922019 35922314 -167163218 - AluJo SINE Alu -24 288 1 794 246 66 36 chr5 35922410 35922715 -167162817 - HAL1 LINE L1 -2192 315 2 29 47 0 0 chr5 35923569 35923612 -167161920 + AT_rich Low_complexity Low_complexity 1 43 0 1531 292 85 4 chr5 35923845 35924614 -167160918 + MER69 DNA AcHobo 134 1061 -1465 1105 191 121 59 chr5 35924620 35924974 -167160558 - LTR37A LTR ERV1 0 426 45 1016 257 5 0 chr5 35924974 35925196 -167160336 - MER58A DNA MER1_type -1 223 1 1105 191 121 59 chr5 35925196 35925229 -167160303 - LTR37A LTR ERV1 -381 45 15 22 35 0 0 chr5 35926001 35926030 -167159502 + AT_rich Low_complexity Low_complexity 1 29 0 318 289 39 95 chr5 35926235 35926540 -167158992 + L1M3c LINE L1 6531 6818 -747 203 137 59 20 chr5 35926561 35926612 -167158920 + A-rich Low_complexity Low_complexity 5 57 0 2038 153 5 24 chr5 35926914 35927292 -167158240 - L1PB1 LINE L1 0 6151 5781 310 267 58 0 chr5 35927307 35927393 -167158139 - L1MC4 LINE L1 -1336 6706 6616 3526 155 24 3 chr5 35927394 35928358 -167157174 - L1P5 LINE L1 -362 6505 5526 * 8139 128 30 118 chr5 35928345 35929711 -167155821 - L1P5 LINE L1 -5289 1574 88 2115 123 16 7 chr5 35929711 35930020 -167155512 - AluSx SINE Alu 0 312 1 8139 128 30 118 chr5 35930020 35930280 -167155252 - L1P5 LINE L1 -6775 88 -193 2318 100 47 33 chr5 35930280 35930639 -167154893 + THE1B LTR MaLR 1 364 0 11636 93 2 12 chr5 35930639 35931919 -167153613 + THE1B-int LTR MaLR 1 1265 -315 2336 95 0 28 chr5 35931919 35932236 -167153296 + AluY SINE Alu 2 309 -2 11636 93 2 12 chr5 35932236 35932550 -167152982 + THE1B-int LTR MaLR 1265 1580 0 1794 157 53 36 chr5 35932552 35932908 -167152624 + THE1B LTR MaLR 3 364 0 8139 128 30 118 chr5 35932908 35933002 -167152530 - L1P5 LINE L1 -6760 103 2 377 95 16 0 chr5 35934116 35934179 -167151353 + (TG)n Simple_repeat Simple_repeat 1 64 0 1531 249 98 32 chr5 35936309 35936959 -167148573 + L1ME2 LINE L1 5453 6145 -19 2137 123 3 7 chr5 35937053 35937355 -167148177 + AluSq SINE Alu 1 301 -12 360 247 10 10 chr5 35937429 35937526 -167148006 + MER94 DNA DNA 5 101 -33 222 283 0 0 chr5 35937628 35937674 -167147858 + (TG)n Simple_repeat Simple_repeat 1 46 0 295 359 39 35 chr5 35938155 35938386 -167147146 - L2 LINE L2 -215 3057 2826 492 285 186 40 chr5 35938682 35938935 -167146597 - MLT1H LTR MaLR 0 549 260 769 258 114 54 chr5 35939632 35940198 -167145334 + MLT1F1 LTR MaLR 14 593 -2 2052 84 3 52 chr5 35940489 35940661 -167144871 - AluSg SINE Alu -17 293 141 2334 92 0 0 chr5 35940661 35940954 -167144578 - AluY SINE Alu -16 295 3 2052 84 3 52 chr5 35940954 35941089 -167144443 - AluSg SINE Alu -169 141 1 892 144 8 0 chr5 35941089 35941221 -167144311 - AluSg1 SINE Alu -176 133 1 182 121 0 30 chr5 35941599 35941632 -167143900 + L2 LINE L2 2315 2346 -968 938 208 0 0 chr5 35942837 35942996 -167142536 + FRAM SINE Alu 1 159 -7 249 234 47 0 chr5 35943205 35943269 -167142263 - L2 LINE L2 -342 2930 2864 22 35 0 0 chr5 35944330 35944359 -167141173 + AT_rich Low_complexity Low_complexity 1 29 0 459 73 24 24 chr5 35945422 35945504 -167140028 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 2666 90 3 0 chr5 35945895 35946262 -167139270 - L1PB1 LINE L1 -2 6149 5782 264 167 0 0 chr5 35946262 35946310 -167139222 + (TA)n Simple_repeat Simple_repeat 1 48 0 256 219 98 0 chr5 35946311 35946393 -167139139 + L1MC4 LINE L1 6614 6703 -1339 228 111 93 0 chr5 35946362 35946416 -167139116 + L1MCa LINE L1 2006 2064 -4362 * 210 191 0 0 chr5 35946423 35946470 -167139062 + (TA)n Simple_repeat Simple_repeat 2 48 0 225 143 0 0 chr5 35946617 35946659 -167138873 + LTR66 LTR ERVL 398 439 -171 990 156 0 0 chr5 35946668 35946841 -167138691 + (TA)n Simple_repeat Simple_repeat 2 174 0 6870 188 16 8 chr5 35946841 35948885 -167136647 - L1P5 LINE L1 -371 5780 3726 1568 177 4 4 chr5 35949428 35949688 -167135844 + AluSq SINE Alu 1 260 -53 300 303 11 51 chr5 35950258 35950436 -167135096 + LTR16C LTR ERVL 321 491 0 226 255 85 32 chr5 35950475 35950549 -167134983 - L2 LINE L2 -76 3237 3156 248 89 0 22 chr5 35950549 35950594 -167134938 + (CA)n Simple_repeat Simple_repeat 2 45 0 226 255 85 32 chr5 35950594 35950613 -167134919 - L2 LINE L2 -157 3156 3139 1166 167 19 23 chr5 35950644 35950860 -167134672 + AluJb SINE Alu 82 296 -16 225 164 224 0 chr5 35952029 35952096 -167133436 + L1MC4 LINE L1 6617 6698 -1344 274 285 61 42 chr5 35952789 35952954 -167132578 + L1ME3A LINE L1 5959 6126 -44 972 273 77 3 chr5 35953274 35953640 -167131892 - L1ME3A LINE L1 -286 5884 5492 206 103 0 26 chr5 35954590 35954629 -167130903 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 657 173 47 8 chr5 35954667 35954794 -167130738 + FRAM SINE Alu 9 140 -36 2433 51 0 29 chr5 35955948 35956264 -167129268 - AluY SINE Alu -4 307 1 2344 62 7 0 chr5 35956511 35956824 -167128708 - AluY SINE Alu 0 311 1 2982 134 4 8 chr5 35957418 35957894 -167127638 - MER41B LTR ERV1 -159 476 3 21 0 0 0 chr5 35958049 35958070 -167127462 + AT_rich Low_complexity Low_complexity 1 21 0 1956 166 32 54 chr5 35960359 35960800 -167124732 - LTR49 LTR ERV1 0 595 165 10471 29 1 2 chr5 35960972 35962204 -167123328 - HERVK LTR ERVK -6013 1230 1 7858 52 15 2 chr5 35962207 35963161 -167122371 - LTR5 LTR ERVK -3 966 1 13474 78 4 3 chr5 35963161 35965043 -167120489 - L1P LINE L1 -2271 3875 1993 604 324 26 10 chr5 35965159 35965468 -167120064 + L1M4 LINE L1 4020 4333 -1813 12039 175 37 22 chr5 35965778 35968092 -167117440 + L1M1 LINE L1 8 2355 -5210 12574 133 113 18 chr5 35968277 35968711 -167116821 - L1PBa LINE L1 -3543 3319 2927 2311 112 3 0 chr5 35968711 35969016 -167116516 - AluSx SINE Alu -6 306 1 12574 133 113 18 chr5 35969016 35971034 -167114498 - L1PBa LINE L1 -3935 2927 637 1141 141 22 0 chr5 35971035 35971219 -167114313 - L1PBa LINE L1 -6675 188 1 1196 180 142 15 chr5 35971284 35971551 -167113981 + MLT1A1 LTR MaLR 1 301 -64 1319 222 2 7 chr5 35971851 35972261 -167113271 + LTR40a LTR ERVL 1 517 -2 683 277 5 5 chr5 35973686 35973870 -167111662 - MLT2F LTR ERVL -4 659 476 184 296 74 0 chr5 35974265 35974346 -167111186 + MIR SINE MIR 104 190 -72 269 193 117 111 chr5 35974651 35974822 -167110710 - L1ME4a LINE L1 -3 6118 5947 32 0 0 0 chr5 35976209 35976241 -167109291 + AT_rich Low_complexity Low_complexity 1 32 0 1196 216 0 11 chr5 35976558 35976831 -167108701 + L1MD3 LINE L1 7725 7994 -1 306 350 29 0 chr5 35977148 35977293 -167108239 - L1ME4a LINE L1 -543 5578 5427 213 378 149 15 chr5 35977534 35977989 -167107543 - L2 LINE L2 -574 2740 2225 910 216 47 0 chr5 35978019 35978209 -167107323 - MER20 DNA MER1_type -20 199 1 312 278 73 52 chr5 35978301 35978492 -167107040 - L2 LINE L2 -1251 2063 1869 3282 206 76 25 chr5 35978914 35979791 -167105741 - MER63C DNA MER1_type 0 930 9 2234 169 58 29 chr5 35980607 35980805 -167104727 + MLT1C LTR MaLR 1 192 -275 267 31 0 0 chr5 35980805 35980837 -167104695 + (CA)n Simple_repeat Simple_repeat 2 33 0 2234 169 58 29 chr5 35980837 35981087 -167104445 + MLT1C LTR MaLR 192 462 -5 478 246 0 36 chr5 35981154 35981264 -167104268 + L2 LINE L2 3160 3265 -7 207 0 0 0 chr5 35981702 35981725 -167103807 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 411 141 0 0 chr5 35982447 35982525 -167103007 + (CA)n Simple_repeat Simple_repeat 2 79 0 308 206 21 41 chr5 35982777 35982874 -167102658 + L1MEd LINE L1 1123 1217 -4902 390 98 7 27 chr5 35984082 35984174 -167101358 + L1PA10 LINE L1 6097 6172 0 235 257 104 45 chr5 35984401 35984593 -167100939 + L1MEd LINE L1 1012 1218 -4901 291 114 0 0 chr5 35984593 35984637 -167100895 + (CA)n Simple_repeat Simple_repeat 2 45 0 331 315 206 11 chr5 35985709 35985976 -167099556 + L1ME LINE L1 5501 5819 -302 2328 98 3 0 chr5 35987088 35987383 -167098149 - AluSg SINE Alu -14 296 1 783 162 214 0 chr5 35988326 35988499 -167097033 + MER2 DNA MER2_type 1 210 -135 25 51 0 0 chr5 35988506 35988545 -167096987 + AT_rich Low_complexity Low_complexity 1 39 0 2535 39 0 16 chr5 35988942 35989247 -167096285 - AluY SINE Alu -11 300 1 23 33 0 0 chr5 35989659 35989689 -167095843 + AT_rich Low_complexity Low_complexity 1 30 0 276 154 0 0 chr5 35989923 35989975 -167095557 + (CA)n Simple_repeat Simple_repeat 2 53 0 796 256 31 75 chr5 35990272 35990565 -167094967 - LTR40a LTR ERVL -118 401 122 188 327 133 40 chr5 35994162 35994312 -167091220 + MIR SINE MIR 98 261 -1 748 138 0 0 chr5 35994482 35994591 -167090941 - MLT1A1 LTR MaLR -256 109 1 13263 191 31 18 chr5 35996585 36000362 -167085170 + L1MA4A LINE L1 6 4132 -2873 2381 90 0 3 chr5 36000362 36000663 -167084869 + AluSc SINE Alu 1 300 -9 13263 191 31 18 chr5 36000663 36003578 -167081954 + L1MA4A LINE L1 4132 7005 0 2060 118 7 14 chr5 36003949 36004245 -167081287 - AluSx SINE Alu -16 296 3 306 0 0 0 chr5 36004397 36004431 -167081101 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 400 43 21 chr5 36004461 36004836 -167080696 + L2 LINE L2 1263 1645 -1669 189 348 174 22 chr5 36004952 36005228 -167080304 - L2 LINE L2 -2787 527 210 1423 228 47 28 chr5 36006221 36006328 -167079204 + MLT2D LTR ERVL 1 104 -310 1602 171 94 3 chr5 36006328 36006637 -167078895 - MER1B DNA MER1_type 0 337 1 1423 228 47 28 chr5 36006637 36006888 -167078644 + MLT2D LTR ERVL 104 366 -48 184 186 34 0 chr5 36006942 36007001 -167078531 + GA-rich Low_complexity Low_complexity 2 62 0 1649 116 64 34 chr5 36007067 36007334 -167078198 + THE1B LTR MaLR 1 275 -89 501 159 34 0 chr5 36007372 36007460 -167078072 - Tigger3(Golem) DNA MER2_type -61 2968 2878 323 112 0 41 chr5 36007475 36007573 -167077959 + (TA)n Simple_repeat Simple_repeat 2 95 0 549 46 92 0 chr5 36007575 36007662 -167077870 - Tigger3(Golem) DNA MER2_type -164 2865 2771 486 201 27 134 chr5 36007659 36007722 -167077810 - Tigger3(Golem) DNA MER2_type -1089 142 103 * 2194 101 14 0 chr5 36007722 36008018 -167077514 - AluSp SINE Alu -13 300 1 486 201 27 134 chr5 36008018 36008103 -167077429 - Tigger3(Golem) DNA MER2_type -1128 103 10 236 139 0 0 chr5 36008130 36008166 -167077366 + MLT2D LTR ERVL 351 386 -11 188 340 100 10 chr5 36009444 36009544 -167075988 + MIR SINE MIR 32 140 -68 12088 159 36 43 chr5 36010251 36013371 -167072161 - L1PB1 LINE L1 -1 6866 3726 1325 108 98 0 chr5 36013371 36013575 -167071957 - AluSp SINE Alu -4 309 86 12088 159 36 43 chr5 36013575 36016984 -167068548 - L1PB1 LINE L1 -3141 3726 53 1269 157 4 4 chr5 36018245 36018493 -167067039 + L1MA4 LINE L1 6044 6291 -9 27 0 0 0 chr5 36018495 36018522 -167067010 + AT_rich Low_complexity Low_complexity 1 27 0 2855 202 53 90 chr5 36018939 36019849 -167065683 + L1MB8 LINE L1 5291 6166 -12 2031 177 51 17 chr5 36019930 36020342 -167065190 + MSTB LTR MaLR 1 426 0 187 120 20 20 chr5 36021463 36021513 -167064019 + (TA)n Simple_repeat Simple_repeat 1 50 0 1099 318 6 8 chr5 36022906 36023264 -167062268 + L1MCb LINE L1 7 363 -5682 2237 66 15 0 chr5 36023822 36024094 -167061438 + AluSq SINE Alu 38 313 0 876 206 4 79 chr5 36025489 36025659 -167059873 + MER20 DNA MER1_type 3 153 -66 2257 196 75 14 chr5 36025659 36026102 -167059430 + MER70A LTR ERVL 3 472 0 876 206 4 79 chr5 36026102 36026159 -167059373 + MER20 DNA MER1_type 153 213 -6 269 346 74 29 chr5 36026536 36026848 -167058684 + L2 LINE L2 1836 2161 -1153 298 342 17 8 chr5 36026853 36026970 -167058562 + L2 LINE L2 2303 2420 -894 851 295 85 19 chr5 36026985 36027398 -167058134 - MLT1J LTR MaLR 0 511 72 250 243 68 0 chr5 36028554 36028628 -167056904 - MIR SINE MIR 0 262 184 2116 124 26 34 chr5 36028874 36029252 -167056280 - THE1C LTR MaLR 0 375 1 201 121 0 0 chr5 36029396 36029429 -167056103 + (TC)n Simple_repeat Simple_repeat 1 33 0 325 360 86 8 chr5 36029598 36029959 -167055573 + L2 LINE L2 1599 1987 -1327 438 20 0 0 chr5 36030154 36030205 -167055327 + (TA)n Simple_repeat Simple_repeat 2 52 0 379 275 100 0 chr5 36030760 36030960 -167054572 - HAL1 LINE L1 -1175 1332 1113 716 168 15 0 chr5 36030960 36031091 -167054441 - MLT1D LTR MaLR -2 503 371 2602 217 42 109 chr5 36031091 36032148 -167053384 - MER52A LTR ERV1 0 1755 734 267 120 80 0 chr5 36032149 36032199 -167053333 - MLT2A1 LTR ERVL 0 453 400 3074 81 5 5 chr5 36032243 36032652 -167052880 - MLT2A1 LTR ERVL -35 409 1 615 291 0 0 chr5 36032681 36032822 -167052710 - MER52A LTR ERV1 -955 800 660 942 234 63 79 chr5 36032824 36033204 -167052328 - MLT1D LTR MaLR -131 374 1 201 74 0 0 chr5 36033222 36033249 -167052283 + (T)n Simple_repeat Simple_repeat 1 27 0 256 258 36 82 chr5 36033267 36033461 -167052071 - HAL1 LINE L1 -1454 1053 869 1920 158 35 30 chr5 36033848 36034221 -167051311 - THE1C LTR MaLR 0 375 1 327 302 60 37 chr5 36035914 36036203 -167049329 - MLT1I LTR MaLR -19 390 59 199 348 33 22 chr5 36036299 36036391 -167049141 - MIR SINE MIR -151 111 19 26 30 0 0 chr5 36037139 36037172 -167048360 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 36037608 36037637 -167047895 + AT_rich Low_complexity Low_complexity 1 29 0 24 91 0 0 chr5 36037712 36037778 -167047754 + AT_rich Low_complexity Low_complexity 1 66 0 23 0 0 0 chr5 36037791 36037814 -167047718 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 36038535 36038557 -167046975 + AT_rich Low_complexity Low_complexity 1 22 0 2474 58 0 0 chr5 36038865 36039159 -167046373 + AluY SINE Alu 3 296 -15 252 322 96 20 chr5 36039176 36039322 -167046210 + MER5A DNA MER1_type 1 157 -32 22 35 0 0 chr5 36039480 36039509 -167046023 + AT_rich Low_complexity Low_complexity 1 29 0 625 277 30 15 chr5 36040026 36040228 -167045304 - MIR SINE MIR -37 225 21 744 218 20 0 chr5 36041086 36041233 -167044299 - MLT1A1 LTR MaLR 0 365 216 1349 194 106 27 chr5 36041267 36041596 -167043936 - MLT1A2 LTR MaLR -19 355 1 292 224 0 45 chr5 36041770 36041837 -167043695 - L2 LINE L2 0 3313 3250 185 254 83 94 chr5 36042299 36042480 -167043052 - L2 LINE L2 -22 3291 3113 1470 214 127 24 chr5 36043554 36043933 -167041599 + MER47B DNA MER2_type 1 418 0 2299 87 0 6 chr5 36043959 36044270 -167041262 - AluSc SINE Alu 0 309 1 782 169 0 92 chr5 36044429 36044613 -167040919 + FRAM SINE Alu 3 169 -7 34 24 0 0 chr5 36045313 36045354 -167040178 + AT_rich Low_complexity Low_complexity 1 41 0 501 276 80 42 chr5 36045556 36045795 -167039737 + MIR SINE MIR 15 262 0 6056 89 29 1 chr5 36046121 36047180 -167038352 + L1PA14 LINE L1 5067 6150 -11 510 17 0 0 chr5 36047248 36047307 -167038225 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2015 125 0 0 chr5 36047309 36047588 -167037944 - AluSg SINE Alu -31 279 1 3293 103 2 16 chr5 36047632 36048129 -167037403 + L1PB1 LINE L1 5662 6151 0 1727 176 10 13 chr5 36049042 36049348 -167036184 - AluJb SINE Alu -2 310 6 1507 238 75 55 chr5 36049379 36049622 -167035910 - L1ME1 LINE L1 -76 6090 5853 2066 120 7 0 chr5 36049622 36049913 -167035619 - AluSc SINE Alu -16 293 1 1507 238 75 55 chr5 36049913 36050232 -167035300 - L1ME1 LINE L1 -313 5853 5517 321 312 37 28 chr5 36050707 36050816 -167034716 + HAL1 LINE L1 824 933 -1574 735 233 19 0 chr5 36050816 36050975 -167034557 - MLT1E1 LTR MaLR -1 653 492 1022 161 0 0 chr5 36050979 36051134 -167034398 + FRAM SINE Alu 4 158 -18 508 301 109 6 chr5 36051134 36051290 -167034242 - MLT1E1 LTR MaLR -154 439 268 1535 129 41 110 chr5 36051301 36051619 -167033913 - MER1B DNA MER1_type 0 339 44 248 269 65 21 chr5 36051666 36051759 -167033773 - MLT1E1 LTR MaLR -358 235 139 322 264 41 41 chr5 36051829 36051950 -167033582 + HAL1 LINE L1 1832 1952 -555 324 304 47 32 chr5 36052018 36052271 -167033261 + HAL1 LINE L1 2138 2394 -113 26 0 0 0 chr5 36052286 36052312 -167033220 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 36052442 36052468 -167033064 + AT_rich Low_complexity Low_complexity 1 26 0 296 307 69 16 chr5 36052714 36052903 -167032629 - MIR SINE MIR -15 247 49 267 114 0 0 chr5 36053802 36053846 -167031686 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 67 22 0 chr5 36054188 36054233 -167031299 + (TG)n Simple_repeat Simple_repeat 2 47 0 28 0 0 0 chr5 36055000 36055028 -167030504 + AT_rich Low_complexity Low_complexity 1 28 0 228 214 0 0 chr5 36055139 36055195 -167030337 + (TG)n Simple_repeat Simple_repeat 2 57 0 190 256 35 93 chr5 36055785 36055871 -167029661 - MIR SINE MIR -54 208 128 30 27 0 0 chr5 36058368 36058405 -167027127 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 36058631 36058658 -167026874 + AT_rich Low_complexity Low_complexity 1 27 0 1518 207 0 0 chr5 36058658 36058929 -167026603 - AluJb SINE Alu -18 294 24 25 31 0 0 chr5 36058939 36058971 -167026561 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 36059465 36059486 -167026046 + (TAA)n Simple_repeat Simple_repeat 1 21 0 266 241 247 13 chr5 36059489 36059647 -167025885 - MIR SINE MIR -2 260 66 22 35 0 0 chr5 36059666 36059695 -167025837 + AT_rich Low_complexity Low_complexity 1 29 0 865 163 0 0 chr5 36059706 36059847 -167025685 - AluJb SINE Alu -14 298 158 1985 249 50 23 chr5 36060106 36060725 -167024807 - L1ME2 LINE L1 -10 6154 5519 28 29 0 0 chr5 36061006 36061041 -167024491 + AT_rich Low_complexity Low_complexity 1 35 0 8234 188 26 60 chr5 36062014 36064758 -167020774 - L1MA7 LINE L1 -2 6875 4207 751 174 0 0 chr5 36064758 36064879 -167020653 - FLAM_C SINE Alu -22 121 1 8234 188 26 60 chr5 36064879 36065234 -167020298 - L1MA7 LINE L1 -2670 4207 3841 1563 270 35 53 chr5 36065231 36065980 -167019552 - L1MA7 LINE L1 -5581 1072 1 * 22 0 0 0 chr5 36066035 36066057 -167019475 + AT_rich Low_complexity Low_complexity 1 22 0 1363 291 116 29 chr5 36066376 36067215 -167018317 - L2 LINE L2 0 3313 2393 218 376 81 16 chr5 36067213 36067399 -167018133 + L2 LINE L2 2556 2753 -561 * 712 200 0 23 chr5 36067694 36067824 -167017708 + FLAM_C SINE Alu 2 128 -5 1113 264 95 19 chr5 36068006 36068385 -167017147 - MLT1F LTR MaLR 0 542 135 234 348 0 42 chr5 36068451 36068569 -167016963 - MLT1F LTR MaLR -429 113 1 295 269 101 8 chr5 36068570 36068689 -167016843 - MLT1F-int LTR MaLR -1 1734 1605 212 143 0 41 chr5 36068864 36068913 -167016619 + (CAAAAA)n Simple_repeat Simple_repeat 1 47 0 2204 80 16 0 chr5 36069410 36069721 -167015811 - L1PA7 LINE L1 0 6154 5839 5625 72 4 1 chr5 36069721 36070488 -167015044 - L1P LINE L1 -2476 3670 2902 4968 176 36 42 chr5 36070487 36071548 -167013984 + L1P LINE L1 11 1064 -5082 * 345 47 0 0 chr5 36071751 36071794 -167013738 + (TG)n Simple_repeat Simple_repeat 1 43 0 202 220 0 20 chr5 36072502 36072552 -167012980 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr5 36072772 36072796 -167012736 + AT_rich Low_complexity Low_complexity 1 24 0 2399 76 0 3 chr5 36072861 36073162 -167012370 - AluY SINE Alu -11 300 1 211 260 94 10 chr5 36073695 36073791 -167011741 - MIR SINE MIR -3 259 156 188 316 84 11 chr5 36073841 36073936 -167011596 - MIR SINE MIR -57 151 50 1226 259 86 40 chr5 36073955 36074565 -167010967 - MER69 DNA AcHobo -1 2525 1944 183 42 0 0 chr5 36074565 36074589 -167010943 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1226 259 86 40 chr5 36074589 36074830 -167010702 - MER69 DNA AcHobo -582 1944 294 438 289 9 0 chr5 36074832 36074946 -167010586 - MER94 DNA DNA -2 132 18 31 26 0 0 chr5 36076008 36076046 -167009486 + AT_rich Low_complexity Low_complexity 1 38 0 282 283 33 33 chr5 36076133 36076253 -167009279 - HAL1 LINE L1 -138 2369 2250 481 30 30 0 chr5 36076958 36077025 -167008507 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 465 83 111 0 chr5 36077350 36077422 -167008110 - MADE1 DNA Mariner 0 80 1 1710 279 108 30 chr5 36077453 36078660 -167006872 + L1MC4 LINE L1 6483 7900 -142 315 85 0 0 chr5 36078663 36078710 -167006822 + (TG)n Simple_repeat Simple_repeat 2 48 0 679 253 95 63 chr5 36078710 36079280 -167006252 - L1MEc LINE L1 -2700 3515 2928 2493 59 0 0 chr5 36079283 36079586 -167005946 - AluY SINE Alu -8 303 1 289 256 37 0 chr5 36079631 36079713 -167005819 - L1MEc LINE L1 -3427 2788 2704 831 253 12 52 chr5 36079784 36080128 -167005404 - L1MEc LINE L1 -3652 2563 2234 336 333 73 38 chr5 36080152 36080413 -167005119 - L1MEc LINE L1 -5340 1056 787 892 330 44 25 chr5 36081440 36081801 -167003731 - MLT1J LTR MaLR -143 368 1 747 257 41 28 chr5 36083147 36083365 -167002167 - MIR SINE MIR -21 241 21 1922 145 30 36 chr5 36085041 36085406 -167000126 + THE1B LTR MaLR 1 363 -1 1776 159 32 29 chr5 36085741 36086050 -166999482 + AluSx SINE Alu 3 312 0 1060 226 23 0 chr5 36087174 36087391 -166998141 + AluJo SINE Alu 71 292 -20 2240 100 7 7 chr5 36087450 36087750 -166997782 - AluSc SINE Alu -9 300 1 24 53 0 0 chr5 36088195 36088233 -166997299 + AT_rich Low_complexity Low_complexity 1 38 0 207 47 0 139 chr5 36088443 36088486 -166997046 + (A)n Simple_repeat Simple_repeat 1 37 0 349 278 11 11 chr5 36089071 36089161 -166996371 + MIR SINE MIR 3 92 -170 485 298 60 0 chr5 36089269 36089420 -166996112 + MIR SINE MIR 86 245 -17 280 313 97 31 chr5 36089630 36089825 -166995707 - L1ME LINE L1 -461 5660 5453 321 136 0 17 chr5 36089846 36089905 -166995627 - MLT1E2 LTR MaLR -2 622 565 204 40 0 0 chr5 36089950 36089975 -166995557 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1114 236 171 104 chr5 36089975 36090480 -166995052 - MLT1E2 LTR MaLR -53 571 9 378 307 17 22 chr5 36090485 36090664 -166994868 - L1ME LINE L1 -686 5435 5258 5597 118 3 7 chr5 36090725 36091591 -166993941 - L1PB1 LINE L1 -2 6852 5990 667 117 29 0 chr5 36091574 36091677 -166993855 - L1PB1 LINE L1 -4466 2383 2278 * 22 0 0 0 chr5 36092528 36092550 -166992982 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 36093879 36093903 -166991629 + AT_rich Low_complexity Low_complexity 1 24 0 279 325 12 0 chr5 36093917 36093997 -166991535 + MIR3 SINE MIR 89 169 -39 2170 114 7 0 chr5 36094262 36094559 -166990973 + AluSp SINE Alu 1 299 -14 3591 30 5 0 chr5 36094952 36095381 -166990151 - L1PA4 LINE L1 -2 6153 5723 339 89 0 0 chr5 36095381 36095426 -166990106 + L1PA4 LINE L1 5681 5725 -430 23 0 0 0 chr5 36095431 36095454 -166990078 + AT_rich Low_complexity Low_complexity 1 23 0 293 26 0 0 chr5 36095454 36095492 -166990040 + L1HS LINE L1 5866 5903 -252 1611 102 0 31 chr5 36095512 36095768 -166989764 - L1PA13 LINE L1 -19 6144 5897 1919 150 7 10 chr5 36095858 36096164 -166989368 - AluSx SINE Alu -7 305 1 568 223 42 24 chr5 36097820 36097986 -166987546 - LTR33 LTR ERVL -18 503 335 377 273 20 33 chr5 36098084 36098234 -166987298 - LTR33 LTR ERVL -373 148 1 777 241 84 33 chr5 36098353 36098587 -166986945 - L1MA9 LINE L1 -38 6274 6053 2635 17 0 0 chr5 36098587 36098880 -166986652 + AluYa5 SINE Alu 1 293 -18 777 241 84 33 chr5 36098880 36099010 -166986522 - L1MA9 LINE L1 -259 6053 5802 1868 153 123 50 chr5 36099341 36099740 -166985792 + MSTA LTR MaLR 1 428 0 545 315 113 56 chr5 36100075 36100685 -166984847 + L1ME4a LINE L1 5320 5964 -157 382 344 114 13 chr5 36101591 36101818 -166983714 - MIR SINE MIR 0 262 13 3214 160 8 4 chr5 36101920 36102445 -166983087 + MER1A DNA MER1_type 1 527 0 198 0 0 0 chr5 36102881 36102903 -166982629 + (T)n Simple_repeat Simple_repeat 1 22 0 186 150 0 0 chr5 36104126 36104166 -166981366 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 4898 129 36 4 chr5 36104181 36104966 -166980566 - L1PA16 LINE L1 -5 6161 5352 7645 26 0 0 chr5 36104978 36106052 -166979480 - L1PA3 LINE L1 -10 6145 5072 2423 246 108 10 chr5 36106555 36107418 -166978114 + L1M4 LINE L1 4110 5056 -1090 636 238 110 0 chr5 36107428 36107592 -166977940 + MER58A DNA MER1_type 43 224 0 197 128 0 26 chr5 36108110 36108149 -166977383 + (TTCCC)n Simple_repeat Simple_repeat 2 39 0 381 318 110 42 chr5 36108271 36108626 -166976906 - L1M4 LINE L1 -2167 3979 3601 28 29 0 0 chr5 36108764 36108799 -166976733 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 36109688 36109710 -166975822 + AT_rich Low_complexity Low_complexity 1 22 0 2273 78 3 3 chr5 36109902 36110197 -166975335 - AluY SINE Alu -16 295 1 203 175 0 0 chr5 36110395 36110435 -166975097 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2331 54 11 0 chr5 36110839 36111173 -166974359 - AluY SINE Alu 0 337 1 2690 130 23 23 chr5 36111398 36111830 -166973702 - Tigger2a DNA MER2_type 0 434 3 574 303 19 6 chr5 36111843 36112005 -166973527 + MER91A DNA MER1_type 10 173 -23 306 182 52 13 chr5 36112350 36112427 -166973105 - MER116 DNA Mariner 0 80 1 278 151 0 49 chr5 36112833 36112894 -166972638 - MLT1B LTR MaLR -7 460 301 248 254 18 0 chr5 36113445 36113517 -166972015 + MIR SINE MIR 74 147 -61 693 197 22 60 chr5 36115801 36115984 -166969548 + LTR40a LTR ERVL 1 233 -286 198 103 0 0 chr5 36115988 36116017 -166969515 + (TG)n Simple_repeat Simple_repeat 1 29 0 309 262 128 103 chr5 36117229 36117801 -166967731 + HAL1 LINE L1 1291 1876 -631 2007 92 26 4 chr5 36118719 36118992 -166966540 + AluSg SINE Alu 1 279 -31 2627 45 0 3 chr5 36119469 36119779 -166965753 - AluY SINE Alu -2 309 1 512 146 100 77 chr5 36120609 36120739 -166964793 + MER20 DNA MER1_type 1 133 -86 315 150 0 0 chr5 36121367 36121427 -166964105 + (GA)n Simple_repeat Simple_repeat 1 60 0 251 277 79 40 chr5 36121459 36121560 -166963972 - LTR67 LTR ERVL -339 218 114 391 273 25 12 chr5 36123727 36123888 -166961644 + (TA)n Simple_repeat Simple_repeat 2 164 0 357 92 62 46 chr5 36124165 36124230 -166961302 + MADE1 DNA Mariner 13 78 -2 333 326 41 20 chr5 36124540 36124687 -166960845 + L2 LINE L2 2173 2322 -992 2190 107 13 0 chr5 36124818 36125127 -166960405 + AluSp SINE Alu 1 313 0 683 146 73 15 chr5 36125266 36125403 -166960129 + MLT1B LTR MaLR 13 157 -233 7302 28 0 0 chr5 36125408 36126653 -166958879 - L1PA4 LINE L1 0 6155 4913 3952 28 6 2 chr5 36126654 36127148 -166958384 + L1P LINE L1 2706 3201 -2945 1317 160 16 29 chr5 36127148 36127392 -166958140 + MLT1B LTR MaLR 148 388 -2 194 301 0 14 chr5 36127679 36127752 -166957780 + L2 LINE L2 2317 2388 -926 1467 213 50 79 chr5 36127764 36128243 -166957289 - MLT1C LTR MaLR 0 467 3 809 333 93 38 chr5 36128329 36129057 -166956475 - L2 LINE L2 -3 3310 2543 1908 211 36 101 chr5 36129103 36129768 -166955764 + MLT1E2 LTR MaLR 1 622 -4 192 152 0 0 chr5 36130354 36130387 -166955145 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 395 276 29 16 chr5 36130588 36130775 -166954757 - L1MC/D LINE L1 -537 5584 5484 222 160 0 0 chr5 36131482 36131532 -166954000 + A-rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5 36131632 36131655 -166953877 + AT_rich Low_complexity Low_complexity 1 23 0 51 65 0 0 chr5 36131855 36131948 -166953584 + AT_rich Low_complexity Low_complexity 1 93 0 242 254 45 9 chr5 36132124 36132234 -166953298 + HAL1 LINE L1 2252 2365 -142 1504 163 89 21 chr5 36132320 36132658 -166952874 + MER46B DNA MER2_type 1 236 0 284 169 34 0 chr5 36133160 36133219 -166952313 - Tigger4(Zombi) DNA MER2_type -72 2659 2599 324 324 51 34 chr5 36134215 36134391 -166951141 + L2 LINE L2 3133 3311 -2 26 0 0 0 chr5 36134864 36134890 -166950642 + AT_rich Low_complexity Low_complexity 1 26 0 334 294 163 22 chr5 36135433 36135549 -166949983 + L1ME3A LINE L1 4499 4597 -1549 378 0 0 0 chr5 36135549 36135591 -166949941 + (TG)n Simple_repeat Simple_repeat 1 42 0 334 294 163 22 chr5 36135591 36136107 -166949425 + L1ME3A LINE L1 4597 5220 -926 2301 92 20 0 chr5 36136139 36136431 -166949101 + AluSg SINE Alu 7 304 -6 436 354 56 0 chr5 36136445 36136589 -166948943 - MER91A DNA MER1_type -43 153 2 228 285 39 31 chr5 36136597 36136727 -166948805 + L1ME3A LINE L1 5215 5345 -801 3076 90 16 14 chr5 36136799 36137242 -166948290 + MLT2A1 LTR ERVL 1 444 0 646 290 117 21 chr5 36137268 36137637 -166947895 + L1ME3A LINE L1 5494 5911 -259 1694 168 49 41 chr5 36137637 36137982 -166947550 - MER7A DNA MER2_type 0 346 1 646 290 117 21 chr5 36137982 36138040 -166947492 + L1ME3A LINE L1 5911 5962 -208 1745 227 42 18 chr5 36138339 36138788 -166946744 - MLT1C LTR MaLR 0 467 8 223 313 14 116 chr5 36139758 36139905 -166945627 - MIR3 SINE MIR -3 205 74 22 0 0 0 chr5 36140377 36140399 -166945133 + AT_rich Low_complexity Low_complexity 1 22 0 2526 161 25 2 chr5 36140869 36141316 -166944216 - L1PB4 LINE L1 0 6156 5700 1773 162 13 0 chr5 36141316 36141631 -166943901 + L1PB4 LINE L1 5365 5683 -473 2100 161 14 55 chr5 36141640 36141827 -166943705 + MSTB LTR MaLR 1 194 -232 2145 134 0 6 chr5 36141827 36142141 -166943391 - AluSx SINE Alu 0 312 1 2100 161 14 55 chr5 36142141 36142369 -166943163 + MSTB LTR MaLR 194 399 -27 216 67 0 0 chr5 36142369 36142399 -166943133 + (T)n Simple_repeat Simple_repeat 1 30 0 4744 141 26 5 chr5 36143675 36144491 -166941041 - L1MC2 LINE L1 -3 6341 5509 33 56 0 0 chr5 36144867 36144921 -166940611 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 36146745 36146767 -166938765 + AT_rich Low_complexity Low_complexity 1 22 0 268 304 89 25 chr5 36146929 36147087 -166938445 + LTR16A LTR ERVL 276 443 -7 980 358 38 19 chr5 36147120 36147701 -166937831 + HERV16 LTR ERVL 48 639 -4357 403 217 225 14 chr5 36147743 36147881 -166937651 + MER96 DNA MER1_type 5 171 -4 662 311 36 8 chr5 36148458 36148706 -166936826 + HERV16 LTR ERVL 1710 1964 -3032 1393 352 63 18 chr5 36148723 36149993 -166935539 + HERV16 LTR ERVL 2683 3997 -1657 285 286 24 16 chr5 36149993 36150119 -166935413 + HERV16 LTR ERVL 3895 4021 -1743 326 307 66 18 chr5 36150341 36150507 -166935025 + HERV16 LTR ERVL 4150 4323 -1331 707 298 85 34 chr5 36150536 36151045 -166934487 + HERV16 LTR ERVL 4494 4983 -502 385 297 125 0 chr5 36151351 36151479 -166934053 - MER58B DNA MER1_type 0 341 198 307 321 66 58 chr5 36151673 36151810 -166933722 - L2 LINE L2 -3 3269 3132 685 332 70 27 chr5 36152212 36152772 -166932760 - L2 LINE L2 -1001 2313 1730 2151 103 0 35 chr5 36152867 36153178 -166932354 + AluSq SINE Alu 1 300 -13 435 160 21 0 chr5 36153341 36153435 -166932097 - L1MA7 LINE L1 -4 6287 6192 231 319 14 0 chr5 36153631 36153700 -166931832 + L1MCc LINE L1 371 440 -5983 905 275 48 22 chr5 36154174 36154628 -166930904 + L1M4 LINE L1 4225 4690 -1456 1292 204 9 20 chr5 36154786 36155106 -166930426 - MLT1A1 LTR MaLR 0 365 1 24 0 0 0 chr5 36155330 36155354 -166930178 + AT_rich Low_complexity Low_complexity 1 24 0 324 283 62 18 chr5 36156973 36157086 -166928446 - L2 LINE L2 -4 3309 3192 202 320 27 0 chr5 36157822 36157897 -166927635 + L2 LINE L2 3237 3313 0 353 284 47 88 chr5 36158611 36158826 -166926706 + MIR SINE MIR 47 252 -10 288 138 17 0 chr5 36158934 36158992 -166926540 + L1P LINE L1 5338 5396 -769 2192 105 0 0 chr5 36158992 36159278 -166926254 + AluSg SINE Alu 1 286 -24 3656 184 33 9 chr5 36159282 36160042 -166925490 + L1MC2 LINE L1 5559 6336 -8 316 323 86 36 chr5 36160042 36160262 -166925270 - L2 LINE L2 -69 3244 3014 273 310 25 120 chr5 36160418 36160472 -166925060 + L2 LINE L2 2688 2746 -568 784 170 0 25 chr5 36160472 36160631 -166924901 - L1MA10 LINE L1 -3 6331 6177 273 310 25 120 chr5 36160631 36160892 -166924640 + L2 LINE L2 2746 2973 -341 314 250 24 0 chr5 36160982 36161066 -166924466 + L2 LINE L2 2976 3061 -252 207 159 0 164 chr5 36161307 36161515 -166924017 + (TATAG)n Simple_repeat Simple_repeat 5 178 0 220 163 0 147 chr5 36161563 36161753 -166923779 + (TATAA)n Simple_repeat Simple_repeat 5 166 0 * 225 164 0 148 chr5 36161684 36161963 -166923569 + (TATAG)n Simple_repeat Simple_repeat 1 237 0 211 164 0 155 chr5 36162042 36162249 -166923283 + (TATAG)n Simple_repeat Simple_repeat 1 175 0 * 217 153 11 142 chr5 36162101 36162291 -166923241 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 309 284 55 18 chr5 36162366 36162475 -166923057 + L2 LINE L2 3197 3309 -4 607 339 80 42 chr5 36166004 36166757 -166918775 - L2 LINE L2 -269 3044 2220 1628 189 8 23 chr5 36166757 36167089 -166918443 - L1MA6 LINE L1 -221 6082 5753 1162 143 22 9 chr5 36167089 36167306 -166918226 + L1MA6 LINE L1 6074 6300 0 1628 189 8 23 chr5 36167306 36167349 -166918183 - L1MA6 LINE L1 -550 5753 5711 1113 345 171 36 chr5 36167374 36168989 -166916543 - L2 LINE L2 -1149 2165 333 575 335 12 0 chr5 36169035 36169208 -166916324 - MIR SINE MIR -56 206 32 283 287 62 53 chr5 36169540 36169749 -166915783 + MLT1I LTR MaLR 4 214 -195 1427 191 94 4 chr5 36170034 36170311 -166915221 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 36170624 36170645 -166914887 + AT_rich Low_complexity Low_complexity 1 21 0 300 200 0 0 chr5 36171472 36171547 -166913985 + CT-rich Low_complexity Low_complexity 1 75 0 257 332 137 32 chr5 36172189 36172786 -166912746 + L2 LINE L2 1713 2372 -942 1162 93 0 7 chr5 36172889 36173040 -166912492 - AluSg/x SINE Alu -30 282 133 516 363 117 11 chr5 36173049 36173426 -166912106 + L2 LINE L2 2549 2965 -349 368 346 81 0 chr5 36173505 36173641 -166911891 + L2 LINE L2 3167 3313 0 27 87 0 0 chr5 36173738 36173807 -166911725 + AT_rich Low_complexity Low_complexity 1 69 0 286 233 0 14 chr5 36174174 36174247 -166911285 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 189 255 106 85 chr5 36174431 36174525 -166911007 - L2 LINE L2 -8 3305 3210 827 217 65 28 chr5 36176029 36176246 -166909286 + LTR50 LTR ERVL 1 225 -570 294 234 102 36 chr5 36176247 36176458 -166909074 + LTR50 LTR ERVL 536 792 -3 25 31 0 0 chr5 36176470 36176502 -166909030 + AT_rich Low_complexity Low_complexity 1 32 0 2624 24 0 0 chr5 36176544 36176839 -166908693 + AluY SINE Alu 1 295 -16 360 94 0 0 chr5 36177543 36177596 -166907936 + (A)n Simple_repeat Simple_repeat 1 53 0 630 235 50 40 chr5 36178296 36178496 -166907036 - MER3 DNA MER1_type -7 202 1 2312 66 24 3 chr5 36178592 36178881 -166906651 + AluY SINE Alu 1 295 -16 415 283 58 0 chr5 36180879 36180999 -166904533 - MER94 DNA DNA -5 129 3 1190 107 12 0 chr5 36181314 36181482 -166904050 + AluSp SINE Alu 133 302 -11 419 309 40 8 chr5 36182251 36182377 -166903155 + MIR SINE MIR 15 144 -118 309 26 0 0 chr5 36183625 36183663 -166901869 + (TG)n Simple_repeat Simple_repeat 1 38 0 187 203 27 14 chr5 36183895 36183969 -166901563 + A-rich Low_complexity Low_complexity 2 76 0 214 164 16 16 chr5 36184057 36184118 -166901414 + GA-rich Low_complexity Low_complexity 3 63 0 2333 107 7 0 chr5 36187283 36187593 -166897939 - AluSq SINE Alu -1 312 1 426 78 0 0 chr5 36190357 36190421 -166895111 + Alu SINE Alu 244 307 -4 2290 82 10 3 chr5 36190432 36190724 -166894808 + AluSp SINE Alu 1 294 -19 2446 124 5 19 chr5 36191569 36191947 -166893585 - THE1C LTR MaLR 0 375 3 356 238 8 0 chr5 36192232 36192358 -166893174 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 36192478 36192512 -166893020 + AT_rich Low_complexity Low_complexity 1 34 0 777 159 13 70 chr5 36192979 36193007 -166892525 + FAM SINE Alu 26 54 -267 2500 134 0 3 chr5 36193007 36193372 -166892160 - THE1B LTR MaLR 0 364 1 777 159 13 70 chr5 36193372 36193500 -166892032 + FAM SINE Alu 54 173 -12 335 298 12 0 chr5 36194560 36194644 -166890888 - L2 LINE L2 -4 3268 3184 474 232 45 18 chr5 36194870 36194982 -166890550 + L1MDa LINE L1 11 125 -6415 279 146 0 0 chr5 36194996 36195044 -166890488 - L1MDa LINE L1 -6452 88 41 1216 231 58 36 chr5 36195068 36195270 -166890262 + L1MDa LINE L1 115 330 -6210 2444 120 19 6 chr5 36195270 36195629 -166889903 + THE1B LTR MaLR 1 364 0 1216 231 58 36 chr5 36195629 36195786 -166889746 + L1MDa LINE L1 330 482 -6058 812 294 23 3 chr5 36196646 36196996 -166888536 + L1M4 LINE L1 4786 5142 -1004 440 248 86 17 chr5 36197180 36197482 -166888050 + L1MDa LINE L1 1140 1462 -5259 2749 170 37 12 chr5 36197584 36198155 -166887377 + L1MC2 LINE L1 5760 6344 0 545 141 196 117 chr5 36199151 36199314 -166886218 + MER44D DNA MER2_type 2 447 -162 2186 149 22 3 chr5 36199314 36199682 -166885850 + THE1C LTR MaLR 1 375 0 7990 136 40 0 chr5 36199682 36200901 -166884631 + THE1C-int LTR MaLR 1 1268 -312 3239 96 0 13 chr5 36201019 36201476 -166884056 + L1PA8A LINE L1 5669 6119 -12 353 238 0 0 chr5 36201515 36201595 -166883937 - L1M4 LINE L1 -1983 4163 4084 255 263 9 35 chr5 36201589 36201703 -166883829 - L1MEc LINE L1 -4665 2457 2347 * 1124 281 36 60 chr5 36202247 36202527 -166883005 - L1MEc LINE L1 -5841 582 320 1004 237 68 78 chr5 36202527 36202999 -166882533 + MLT1C LTR MaLR 1 467 0 1124 281 36 60 chr5 36202999 36203252 -166882280 - L1MEc LINE L1 -6103 320 62 21 0 0 0 chr5 36204299 36204320 -166881212 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 36205144 36205173 -166880359 + AT_rich Low_complexity Low_complexity 1 29 0 344 184 28 9 chr5 36206192 36206301 -166879231 + (TA)n Simple_repeat Simple_repeat 1 111 0 1131 294 10 35 chr5 36207403 36207804 -166877728 + LTR16A LTR ERVL 27 417 -33 944 343 70 18 chr5 36208224 36208781 -166876751 + HERV16 LTR ERVL 809 1394 -3602 1414 300 46 18 chr5 36208785 36209282 -166876250 + HERV16 LTR ERVL 1682 2192 -2804 230 285 29 80 chr5 36209778 36209915 -166875617 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 36210358 36210381 -166875151 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 36211020 36211191 -166874341 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 36211191 36211491 -166874041 + AluY SINE Alu 1 302 -9 663 279 44 63 chr5 36212350 36212665 -166872867 - L2 LINE L2 0 3313 3005 270 254 45 0 chr5 36214082 36214149 -166871383 - L2 LINE L2 0 3313 3244 21 36 0 0 chr5 36214211 36214239 -166871293 + AT_rich Low_complexity Low_complexity 1 28 0 1452 224 37 8 chr5 36214885 36215375 -166870157 - L1M4c LINE L1 -2922 3722 3219 3484 136 9 2 chr5 36215391 36215949 -166869583 - L1PA10 LINE L1 -11 6157 5596 1742 189 6 9 chr5 36215950 36216267 -166869265 - L1P3 LINE L1 -5557 318 3 1735 149 45 36 chr5 36216450 36216758 -166868774 + AluSx SINE Alu 1 311 -1 1646 230 26 33 chr5 36216760 36216773 -166868759 - L1M4c LINE L1 -3454 3190 3178 2516 111 8 0 chr5 36216773 36217125 -166868407 - THE1A LTR MaLR 0 355 1 1646 230 26 33 chr5 36217125 36217585 -166867947 - L1M4c LINE L1 -3466 3178 2719 2131 128 3 0 chr5 36217585 36217882 -166867650 - AluSx SINE Alu -14 298 1 1646 230 26 33 chr5 36217882 36217981 -166867551 - L1M4c LINE L1 -3925 2719 2621 2150 150 8 33 chr5 36217983 36218350 -166867182 - THE1B LTR MaLR 0 364 7 9313 146 41 5 chr5 36218355 36219879 -166865653 - THE1B-int LTR MaLR 0 1580 1 2365 139 14 0 chr5 36219879 36220238 -166865294 - THE1B LTR MaLR 0 364 1 3709 262 64 43 chr5 36220252 36222552 -166862980 - L1M4c LINE L1 -4176 2649 152 472 162 34 51 chr5 36222579 36222633 -166862899 + L1PA16 LINE L1 6040 6093 -73 2277 115 47 16 chr5 36222633 36222997 -166862535 + THE1C LTR MaLR 1 375 0 472 162 34 51 chr5 36222997 36223059 -166862473 + L1PA16 LINE L1 6093 6154 -12 580 161 45 0 chr5 36223063 36223175 -166862357 + L1PA16 LINE L1 17 133 -7432 * 7583 159 38 0 chr5 36223172 36224398 -166861134 + L1PA16 LINE L1 1099 2371 -5194 4615 139 17 4 chr5 36224392 36225152 -166860380 + L1PA16 LINE L1 6681 7450 -135 * 1004 189 26 0 chr5 36225152 36225342 -166860190 + L1PA16 LINE L1 5971 6165 -1 416 170 0 85 chr5 36225350 36225444 -166860088 + LTR29 LTR ERV1 465 550 -72 1641 102 23 8 chr5 36225869 36226133 -166859399 - L1PA8A LINE L1 -513 5618 5351 2057 263 42 40 chr5 36226191 36226703 -166858829 + L1MC/D LINE L1 4264 4774 -1576 2787 3 0 3 chr5 36226703 36227006 -166858526 + AluYa5 SINE Alu 1 302 -9 2057 263 42 40 chr5 36227006 36227822 -166857710 + L1MC/D LINE L1 4774 5607 -743 23 0 0 0 chr5 36227829 36227852 -166857680 + AT_rich Low_complexity Low_complexity 1 23 0 7818 200 67 48 chr5 36227852 36231422 -166854110 - L1MA7 LINE L1 -2 6493 2229 2380 83 0 3 chr5 36231422 36231723 -166853809 - AluSq SINE Alu -13 300 1 7818 200 67 48 chr5 36231723 36231948 -166853584 - L1MA7 LINE L1 -4266 2229 2010 2131 189 44 7 chr5 36232051 36232459 -166853073 - MSTB1 LTR MaLR 0 432 10 2249 280 33 54 chr5 36232492 36233939 -166851593 - L1MA7 LINE L1 -4246 2105 819 486 298 35 6 chr5 36234132 36234303 -166851229 - L1MA7 LINE L1 -6105 176 1 1648 104 4 24 chr5 36235090 36235339 -166850193 - L1PA11 LINE L1 0 6174 5931 2161 113 3 0 chr5 36235640 36235931 -166849601 - AluSg SINE Alu -18 292 1 7492 197 10 19 chr5 36238675 36240290 -166845242 + MST-int LTR MaLR 1 1605 -46 474 140 43 11 chr5 36240291 36240384 -166845148 + MER4A LTR ERV1 3 98 -566 1620 146 165 76 chr5 36240385 36240755 -166844777 + MER4A LTR ERV1 262 664 0 5286 137 74 55 chr5 36240758 36241417 -166844115 + MER4A-int LTR ERV1 1 646 -4369 180 0 0 0 chr5 36241417 36241437 -166844095 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 417 20 0 0 chr5 36241436 36241486 -166844046 + (CA)n Simple_repeat Simple_repeat 1 50 0 5286 137 74 55 chr5 36241437 36243193 -166842339 + MER4A-int LTR ERV1 646 1362 -3653 1034 183 152 5 chr5 36243193 36243417 -166842115 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 36243421 36243479 -166842053 + LTR19-int LTR ERV1 3508 3573 -2013 1201 161 68 21 chr5 36243485 36243728 -166841804 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 36243950 36243991 -166841541 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 36244339 36244360 -166841172 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 36245126 36245179 -166840353 + MIR SINE MIR 99 151 -57 6554 64 10 0 chr5 36245326 36245672 -166839860 - L1PA7 LINE L1 0 6154 5813 2925 13 0 0 chr5 36245672 36245990 -166839542 - AluYb8 SINE Alu 0 318 1 6554 64 10 0 chr5 36245990 36247239 -166838293 - L1PA7 LINE L1 -341 5813 4581 234 0 0 0 chr5 36247408 36247434 -166838098 + (CA)n Simple_repeat Simple_repeat 2 27 0 215 167 0 24 chr5 36247435 36247477 -166838055 + (TATG)n Simple_repeat Simple_repeat 2 42 0 24445 136 19 34 chr5 36247771 36248935 -166836597 + L1PA8A LINE L1 26 1207 -5239 198 0 0 0 chr5 36248935 36248957 -166836575 + (CAA)n Simple_repeat Simple_repeat 3 24 0 24445 136 19 34 chr5 36248957 36254237 -166831295 + L1PA8A LINE L1 1207 6417 -29 212 21 21 62 chr5 36255810 36255858 -166829674 + (TA)n Simple_repeat Simple_repeat 2 47 0 11537 131 23 28 chr5 36255958 36257122 -166828410 - Tigger1 DNA MER2_type 0 2418 1267 2361 88 0 3 chr5 36257122 36257428 -166828104 + AluY SINE Alu 3 307 -4 11537 131 23 28 chr5 36257428 36258202 -166827330 - Tigger1 DNA MER2_type -1151 1267 490 439 233 117 44 chr5 36258516 36258722 -166826810 - LTR52 LTR ERVL -200 221 1 394 348 18 71 chr5 36259120 36259307 -166826225 + L2 LINE L2 2866 3024 -289 1623 164 7 11 chr5 36259307 36259606 -166825926 + AluJb SINE Alu 9 306 0 394 348 18 71 chr5 36259606 36259811 -166825721 + L2 LINE L2 3024 3238 -75 527 315 105 5 chr5 36260150 36260369 -166825163 + MIR SINE MIR 11 251 -11 21 0 0 0 chr5 36260593 36260614 -166824918 + AT_rich Low_complexity Low_complexity 1 21 0 2508 67 0 3 chr5 36260982 36261294 -166824238 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 36261741 36261770 -166823762 + AT_rich Low_complexity Low_complexity 1 29 0 442 304 88 5 chr5 36263044 36263261 -166822271 - LTR16C LTR ERVL 0 491 257 301 140 193 0 chr5 36263566 36263623 -166821909 + Tigger2 DNA MER2_type 1 68 -2650 * 1933 128 15 181 chr5 36263608 36264140 -166821392 + Tigger2 DNA MER2_type 2267 2710 -8 204 407 57 14 chr5 36264251 36264391 -166821141 + L2 LINE L2 3122 3267 -5 53 69 0 0 chr5 36265336 36265438 -166820094 + AT_rich Low_complexity Low_complexity 1 102 0 249 235 59 0 chr5 36265954 36266039 -166819493 + L1M4 LINE L1 4500 4589 -1557 21 0 0 0 chr5 36266204 36266225 -166819307 + AT_rich Low_complexity Low_complexity 1 21 0 2485 122 6 0 chr5 36266247 36266607 -166818925 - THE1B LTR MaLR -2 362 1 8118 126 51 35 chr5 36266607 36267929 -166817603 - THE1B-int LTR MaLR 0 1580 238 207 316 38 0 chr5 36268158 36268237 -166817295 + L2 LINE L2 3229 3310 -3 21 0 0 0 chr5 36268755 36268776 -166816756 + AT_rich Low_complexity Low_complexity 1 21 0 29 94 0 0 chr5 36269782 36269867 -166815665 + AT_rich Low_complexity Low_complexity 1 85 0 348 248 62 31 chr5 36270221 36270350 -166815182 + MIR3 SINE MIR 44 176 -32 320 305 76 23 chr5 36270834 36270965 -166814567 + L2 LINE L2 3176 3313 0 24 32 0 0 chr5 36271128 36271159 -166814373 + AT_rich Low_complexity Low_complexity 1 31 0 797 286 87 4 chr5 36271159 36271390 -166814142 - MIR SINE MIR -5 257 8 203 317 66 44 chr5 36272107 36272290 -166813242 - L2 LINE L2 -812 2502 2316 337 245 0 20 chr5 36272414 36272512 -166813020 - Charlie1 DNA MER1_type -10 2751 2656 1661 213 57 40 chr5 36272613 36273107 -166812425 - Charlie1 DNA MER1_type -518 2243 1742 2163 139 25 3 chr5 36274063 36274416 -166811116 - THE1C LTR MaLR 0 375 15 270 316 51 0 chr5 36274721 36274819 -166810713 + Tigger8 DNA MER2_type 2 104 -562 28 48 0 0 chr5 36275080 36275122 -166810410 + AT_rich Low_complexity Low_complexity 1 42 0 376 341 73 6 chr5 36275136 36275491 -166810041 + Tigger8 DNA MER2_type 284 662 -4 1531 185 3 31 chr5 36275610 36275896 -166809636 - AluJo SINE Alu -14 298 21 240 280 13 13 chr5 36276203 36276278 -166809254 + MIR SINE MIR 88 162 -100 228 235 37 0 chr5 36276568 36276649 -166808883 - HAL1 LINE L1 -173 2334 2251 297 0 0 0 chr5 36277377 36277410 -166808122 + (CA)n Simple_repeat Simple_repeat 1 33 0 209 349 40 33 chr5 36277605 36277757 -166807775 - MIR3 SINE MIR -25 183 31 469 315 108 12 chr5 36278193 36278444 -166807088 + LTR16A LTR ERVL 165 439 -11 259 344 81 19 chr5 36278532 36278692 -166806840 + HERV16 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 36278859 36279288 -166806244 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 36279480 36279761 -166805771 + AluSp SINE Alu 2 283 -30 2933 189 33 71 chr5 36281459 36282180 -166803352 - LTR8A LTR ERV1 0 727 34 851 219 31 44 chr5 36282327 36282555 -166802977 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 36282609 36282855 -166802677 + MLT1E1 LTR MaLR 405 654 0 5506 149 29 22 chr5 36283707 36284954 -166800578 - L1MA7 LINE L1 -2 6289 5024 2018 76 0 0 chr5 36285055 36285305 -166800227 + AluY SINE Alu 39 288 -23 215 298 0 0 chr5 36285308 36285365 -166800167 + GA-rich Low_complexity Low_complexity 4 60 0 362 352 116 24 chr5 36286146 36286527 -166799005 + L2 LINE L2 2475 2890 -424 354 217 0 0 chr5 36286716 36286836 -166798696 + A-rich Low_complexity Low_complexity 1 120 0 388 356 0 0 chr5 36286956 36287116 -166798416 + A-rich Low_complexity Low_complexity 4 163 0 558 232 0 0 chr5 36287136 36287300 -166798232 + A-rich Low_complexity Low_complexity 1 164 0 232 198 40 20 chr5 36287340 36287441 -166798091 + GA-rich Low_complexity Low_complexity 1 103 0 1303 268 125 16 chr5 36337531 36338591 -166746941 - L1MEc LINE L1 -3213 3728 2593 1129 88 16 6 chr5 36338708 36338890 -166746642 - MER4A-int LTR ERV1 -4477 2121 1938 5252 123 58 45 chr5 36338892 36340071 -166745461 - MER4A-int LTR ERV1 -3653 1362 668 345 24 0 0 chr5 36340071 36340113 -166745419 + (TG)n Simple_repeat Simple_repeat 1 42 0 5252 123 58 45 chr5 36340113 36340790 -166744742 - MER4A-int LTR ERV1 -4347 668 1 1620 146 165 76 chr5 36340793 36341163 -166744369 - MER4A LTR ERV1 0 664 262 474 140 43 11 chr5 36341164 36341257 -166744275 - MER4A LTR ERV1 -566 98 3 7575 224 11 40 chr5 36341258 36342912 -166742620 - MST-int LTR MaLR -46 1605 1 261 364 24 34 chr5 36344092 36344298 -166741234 - ERVL LTR ERVL -670 5094 4891 377 300 18 0 chr5 36344831 36344941 -166740591 + MLT1C LTR MaLR 356 467 0 905 227 74 8 chr5 36344941 36345183 -166740349 - L1MEc LINE L1 -6104 319 62 21 0 0 0 chr5 36346230 36346251 -166739281 + AT_rich Low_complexity Low_complexity 1 21 0 339 263 0 35 chr5 36348102 36348216 -166737316 + L1MC4 LINE L1 6592 6701 -1341 406 196 54 22 chr5 36348991 36349083 -166736449 + L1MDa LINE L1 31 125 -6415 279 146 0 0 chr5 36349097 36349145 -166736387 - L1MDa LINE L1 -6452 88 41 1240 225 61 39 chr5 36349169 36349371 -166736161 + L1MDa LINE L1 115 330 -6210 2444 120 19 6 chr5 36349371 36349730 -166735802 + THE1B LTR MaLR 1 364 0 1240 225 61 39 chr5 36349730 36349887 -166735645 + L1MDa LINE L1 330 482 -6058 836 291 23 3 chr5 36350731 36351081 -166734451 + L1M4 LINE L1 4786 5142 -1004 440 248 86 17 chr5 36351264 36351566 -166733966 + L1MDa LINE L1 1140 1462 -5259 2771 168 34 12 chr5 36351668 36352233 -166733299 + L1MC2 LINE L1 5760 6336 -8 545 141 196 117 chr5 36353224 36353387 -166732145 + MER44D DNA MER2_type 2 447 -162 2186 149 22 3 chr5 36353387 36353755 -166731777 + THE1C LTR MaLR 1 375 0 9258 150 33 38 chr5 36353755 36355342 -166730190 + THE1C-int LTR MaLR 1 1580 0 617 138 0 0 chr5 36355342 36355436 -166730096 + THE1C LTR MaLR 1 94 -270 2185 141 5 30 chr5 36355436 36355741 -166729791 - L1P4 LINE L1 -468 5697 5403 2267 87 0 13 chr5 36355741 36356039 -166729493 - AluY SINE Alu -17 294 1 2185 141 5 30 chr5 36356039 36356129 -166729403 - L1P4 LINE L1 -762 5403 5312 229 204 11 45 chr5 36356356 36356444 -166729088 + GA-rich Low_complexity Low_complexity 2 86 0 2635 44 0 0 chr5 36356639 36356980 -166728552 - L1P LINE L1 -788 5358 5018 2711 45 0 0 chr5 36356980 36357298 -166728234 + L1PA4 LINE L1 5822 6152 -3 462 306 48 11 chr5 36357409 36357595 -166727937 + L2 LINE L2 2232 2424 -890 586 155 0 0 chr5 36358270 36358373 -166727159 + L1MA1 LINE L1 6200 6302 0 4815 184 97 75 chr5 36358457 36359031 -166726501 - L1MC3 LINE L1 -20 7765 7205 271 244 39 13 chr5 36359031 36359109 -166726423 - MLT1F1 LTR MaLR -453 114 35 4815 184 97 75 chr5 36359109 36359823 -166725709 - L1MC3 LINE L1 -580 7205 6371 366 243 72 45 chr5 36362005 36362092 -166723440 - L2 LINE L2 -6 3307 3215 2364 151 33 14 chr5 36362092 36362516 -166723016 - MSTB1 LTR MaLR 0 432 1 366 243 72 45 chr5 36362516 36362539 -166722993 - L2 LINE L2 -98 3215 3194 1871 120 0 4 chr5 36362974 36363233 -166722299 - AluSg SINE Alu -14 296 39 23 0 0 0 chr5 36363448 36363471 -166722061 + AT_rich Low_complexity Low_complexity 1 23 0 4669 128 30 26 chr5 36365721 36366497 -166719035 - MER4E LTR ERV1 0 779 1 224 342 92 8 chr5 36366763 36366883 -166718649 - MIR SINE MIR -16 246 117 316 342 41 50 chr5 36367057 36367376 -166718156 - L2 LINE L2 -75 3238 2923 328 279 47 58 chr5 36367447 36367656 -166717876 - L1MC3 LINE L1 -2266 5542 5335 1947 140 40 32 chr5 36367656 36368028 -166717504 - THE1C LTR MaLR 0 375 1 328 279 47 58 chr5 36368028 36368076 -166717456 - L1MC3 LINE L1 -2473 5335 5288 362 181 0 48 chr5 36368081 36368164 -166717368 + MADE1 DNA Mariner 2 80 0 24 32 0 0 chr5 36368238 36368269 -166717263 + AT_rich Low_complexity Low_complexity 1 31 0 2577 162 16 4 chr5 36368277 36368765 -166716767 - L1MA4 LINE L1 -5 6295 5802 27 49 0 0 chr5 36370041 36370082 -166715450 + AT_rich Low_complexity Low_complexity 1 41 0 403 289 152 34 chr5 36370320 36370708 -166714824 - HAL1b LINE L1 -844 504 71 1018 210 12 51 chr5 36372091 36372348 -166713184 - MLT1A2 LTR MaLR -127 247 1 367 271 47 47 chr5 36373776 36373905 -166711627 - MIR3 SINE MIR -32 176 48 402 21 0 0 chr5 36373960 36374007 -166711525 + (TG)n Simple_repeat Simple_repeat 2 48 0 1953 132 38 0 chr5 36374351 36374669 -166710863 + MSTA LTR MaLR 1 330 -98 604 282 24 0 chr5 36374876 36375046 -166710486 + MER97c DNA MER1_type? 4 177 -913 259 294 17 34 chr5 36375185 36375304 -166710228 - HAL1b LINE L1 -748 600 484 2033 165 78 47 chr5 36375446 36375919 -166709613 - L1MC2 LINE L1 -18 6326 5839 1503 244 52 21 chr5 36375922 36376344 -166709188 + LTR47B LTR ERVL 1 435 -8 667 208 13 0 chr5 36376352 36376501 -166709031 - L1MC2 LINE L1 -494 5839 5689 5145 17 2 0 chr5 36376601 36377196 -166708336 - L1P LINE L1 -1487 4659 4064 4911 55 0 0 chr5 36377191 36377808 -166707724 + L1P LINE L1 1642 2258 -3888 * 1710 159 9 55 chr5 36379782 36380109 -166705423 + AluSx SINE Alu 1 312 0 1903 89 0 4 chr5 36381599 36381845 -166703687 - AluSc SINE Alu -20 289 45 230 366 21 0 chr5 36382015 36382108 -166703424 + MLT1H LTR MaLR 118 212 -337 393 294 116 1 chr5 36383208 36383373 -166702159 - MIR3 SINE MIR -9 199 12 2031 112 10 13 chr5 36383494 36383806 -166701726 + THE1A LTR MaLR 1 311 -44 639 245 14 7 chr5 36383911 36384054 -166701478 - MER45A DNA AcHobo -34 144 1 533 352 22 9 chr5 36384252 36384479 -166701053 - MIR SINE MIR -31 231 2 1608 224 34 25 chr5 36385416 36385775 -166699757 - MLT1A1 LTR MaLR 0 396 2 1709 218 5 14 chr5 36386421 36386788 -166698744 - MLT1A1 LTR MaLR 0 365 2 391 323 86 21 chr5 36387672 36387963 -166697569 - L3 LINE CR1 -120 1457 1148 1658 156 0 0 chr5 36387964 36388214 -166697318 - HERVL LTR ERVL -1536 4118 3869 4356 142 12 9 chr5 36388237 36388918 -166696614 - HERVL LTR ERVL -1755 3899 3217 * 6222 114 2 28 chr5 36388915 36389833 -166695699 + HERVL LTR ERVL 4504 5397 -257 1476 134 0 0 chr5 36389972 36390181 -166695351 - AluSg/x SINE Alu -11 299 91 244 293 160 55 chr5 36390263 36390663 -166694869 - L3 LINE CR1 -696 881 440 233 95 0 24 chr5 36391212 36391254 -166694278 + (TC)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 36391312 36391336 -166694196 + AT_rich Low_complexity Low_complexity 1 24 0 1507 207 110 78 chr5 36391477 36392014 -166693518 + MLT2B3 LTR ERVL 1 554 0 301 243 6 136 chr5 36392172 36392239 -166693293 - MLT1F LTR MaLR -8 534 501 1731 218 51 32 chr5 36392239 36392731 -166692801 - MLT1D LTR MaLR 0 505 5 301 243 6 136 chr5 36392731 36392832 -166692700 - MLT1F LTR MaLR -41 501 388 242 275 77 92 chr5 36392847 36393054 -166692478 - MLT1F LTR MaLR -200 390 187 259 344 81 19 chr5 36393334 36393494 -166692038 + HERV16-B3 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 36393661 36394090 -166691442 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 36394282 36394563 -166690969 + AluSp SINE Alu 2 283 -30 3040 186 36 63 chr5 36396262 36396975 -166688557 - LTR8A LTR ERV1 0 727 34 840 214 31 48 chr5 36397122 36397351 -166688181 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 36397405 36397651 -166687881 + MLT1E1 LTR MaLR 405 654 0 230 285 29 80 chr5 36398433 36398570 -166686962 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 36399013 36399036 -166686496 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 36399675 36399846 -166685686 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 36399846 36400146 -166685386 + AluY SINE Alu 1 302 -9 25 65 0 0 chr5 36400818 36400864 -166684668 + AT_rich Low_complexity Low_complexity 1 46 0 309 371 81 9 chr5 36401207 36401417 -166684115 - MIR SINE MIR -26 236 12 2625 135 16 0 chr5 36403569 36403998 -166681534 + L1PB1 LINE L1 5712 6147 -4 442 160 0 85 chr5 36404157 36404251 -166681281 - LTR29 LTR ERV1 -72 550 465 1004 189 26 0 chr5 36404259 36404449 -166681083 - L1PA16 LINE L1 -1 6165 5971 4615 139 17 4 chr5 36404449 36405209 -166680323 - L1PA16 LINE L1 -135 7450 6681 * 7569 160 38 0 chr5 36405203 36406429 -166679103 - L1PA16 LINE L1 -5194 2371 1099 580 161 45 0 chr5 36406426 36406538 -166678994 - L1PA16 LINE L1 -7432 133 17 * 496 154 34 51 chr5 36406542 36406604 -166678928 - L1PA16 LINE L1 -12 6154 6093 2276 115 47 16 chr5 36406604 36406968 -166678564 - THE1C LTR MaLR 0 375 1 496 154 34 51 chr5 36406968 36407022 -166678510 - L1PA16 LINE L1 -73 6093 6040 4129 259 75 37 chr5 36407049 36409323 -166676209 + L1M4 LINE L1 152 2649 -4176 2365 139 14 0 chr5 36409337 36409696 -166675836 + THE1B LTR MaLR 1 364 0 9432 143 41 5 chr5 36409696 36411221 -166674311 + THE1B-int LTR MaLR 1 1580 0 2150 150 8 33 chr5 36411226 36411593 -166673939 + THE1B LTR MaLR 7 364 0 360 206 0 0 chr5 36411595 36411686 -166673846 + L1M4 LINE L1 2621 2711 -3933 484 145 0 0 chr5 36411696 36411765 -166673767 + AluS SINE Alu 1 69 -243 369 208 14 69 chr5 36411866 36411996 -166673536 + L1M4 LINE L1 3055 3178 -3466 2503 114 8 0 chr5 36411996 36412348 -166673184 + THE1A LTR MaLR 1 355 0 369 208 14 69 chr5 36412348 36412361 -166673171 + L1M4 LINE L1 3178 3190 -3454 1735 149 45 36 chr5 36412363 36412671 -166672861 - AluSx SINE Alu -1 311 1 1724 196 6 9 chr5 36412854 36413171 -166672361 + L1P3 LINE L1 3 318 -5557 3487 136 9 2 chr5 36413172 36413730 -166671802 + L1PA10 LINE L1 5596 6157 -11 1435 226 37 8 chr5 36413746 36414236 -166671296 + L1M4 LINE L1 3219 3722 -2922 21 36 0 0 chr5 36414882 36414910 -166670622 + AT_rich Low_complexity Low_complexity 1 28 0 270 254 45 0 chr5 36414972 36415039 -166670493 + L2 LINE L2 3244 3313 0 279 308 39 50 chr5 36416456 36416638 -166668894 + L2 LINE L2 3005 3184 -129 2471 234 24 28 chr5 36416750 36416993 -166668539 - L1MC/D LINE L1 -748 5398 5156 1762 123 69 4 chr5 36416993 36417269 -166668263 - AluSc SINE Alu -15 294 1 2471 234 24 28 chr5 36417269 36417945 -166667587 - L1MC/D LINE L1 -990 5156 4659 2049 142 0 0 chr5 36417945 36418240 -166667292 - AluSx SINE Alu -12 300 6 2471 234 24 28 chr5 36418240 36418422 -166667110 - L1MC/D LINE L1 -1487 4659 4478 21 36 0 0 chr5 36418594 36418622 -166666910 + AT_rich Low_complexity Low_complexity 1 28 0 1614 169 40 7 chr5 36418672 36418992 -166666540 - AluSx SINE Alu 0 329 1 784 337 68 42 chr5 36420107 36420878 -166664654 - L2 LINE L2 0 3313 2516 2041 158 42 14 chr5 36420897 36421251 -166664281 + THE1B LTR MaLR 1 364 0 10699 124 11 3 chr5 36421252 36422804 -166662728 + THE1B-int LTR MaLR 2 1566 -14 2258 120 46 6 chr5 36422811 36423161 -166662371 + THE1B LTR MaLR 1 364 0 1038 102 11 17 chr5 36423645 36423690 -166661842 + (TTTC)n Simple_repeat Simple_repeat 1 220 0 1038 102 11 17 chr5 36423690 36423867 -166661665 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 544 62 74 0 chr5 36428357 36428438 -166657094 + PABL_A-int LTR ERV1 1563 1649 -3366 1128 179 127 4 chr5 36428439 36428668 -166656864 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 36428672 36428730 -166656802 + LTR19-int LTR ERV1 3508 3573 -2013 1201 161 68 21 chr5 36428736 36428979 -166656553 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 36429201 36429242 -166656290 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 36429590 36429611 -166655921 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 36430377 36430430 -166655102 + MIR SINE MIR 99 151 -57 6556 66 9 0 chr5 36430577 36430918 -166654614 - L1PA7 LINE L1 0 6154 5818 2911 16 0 0 chr5 36430918 36431236 -166654296 - AluYb8 SINE Alu 0 318 1 6556 66 9 0 chr5 36431236 36432526 -166653006 - L1PA7 LINE L1 -336 5818 4540 22 35 0 0 chr5 36432771 36432800 -166652732 + AT_rich Low_complexity Low_complexity 1 29 0 2333 107 7 0 chr5 36433334 36433644 -166651888 - AluSq SINE Alu -1 312 1 439 73 0 0 chr5 36436408 36436476 -166649056 + Alu SINE Alu 244 311 0 2293 79 10 3 chr5 36436488 36436780 -166648752 + AluSp SINE Alu 1 294 -19 226 276 79 0 chr5 36437418 36437494 -166648038 + MIR SINE MIR 170 251 -11 186 43 0 0 chr5 36438374 36438397 -166647135 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2491 119 5 19 chr5 36440816 36441194 -166644338 - THE1C LTR MaLR 0 375 3 377 230 8 0 chr5 36441479 36441605 -166643927 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 36441725 36441759 -166643773 + AT_rich Low_complexity Low_complexity 1 34 0 793 157 13 69 chr5 36442226 36442254 -166643278 + FAM SINE Alu 26 54 -267 2477 137 0 3 chr5 36442254 36442619 -166642913 - THE1B LTR MaLR 0 364 1 793 157 13 69 chr5 36442619 36442749 -166642783 + FAM SINE Alu 54 175 -10 2175 110 3 0 chr5 36444590 36444881 -166640651 + AluSg SINE Alu 1 292 -18 1642 104 4 24 chr5 36445182 36445431 -166640101 + L1PA11 LINE L1 5931 6174 0 486 298 35 6 chr5 36446219 36446390 -166639142 + L1MA7 LINE L1 1216 1391 -6105 2249 280 29 46 chr5 36446583 36448030 -166637502 + L1MA7 LINE L1 2034 3320 -4246 2131 189 44 7 chr5 36448063 36448471 -166637061 + MSTB1 LTR MaLR 10 432 0 6139 232 64 28 chr5 36448574 36448799 -166636733 + L1MA7 LINE L1 3225 3440 -4125 2354 86 0 3 chr5 36448799 36449100 -166636432 + AluSq SINE Alu 1 300 -13 6139 232 64 28 chr5 36449100 36451633 -166633899 + L1MA7 LINE L1 3440 6130 -1435 4489 174 31 29 chr5 36451636 36452611 -166632921 + L1MA7 LINE L1 6732 7708 -2 23 0 0 0 chr5 36452611 36452634 -166632898 + AT_rich Low_complexity Low_complexity 1 23 0 2040 264 42 40 chr5 36452641 36453457 -166632075 - L1MC/D LINE L1 -743 6198 5569 2805 3 0 3 chr5 36453457 36453762 -166631770 - AluYa5 SINE Alu -7 304 1 2040 264 42 40 chr5 36453762 36454274 -166631258 - L1MC/D LINE L1 -1372 5569 5059 5614 91 3 8 chr5 36454332 36455105 -166630427 + L1PA8A LINE L1 5351 6119 -12 353 238 0 0 chr5 36455144 36455224 -166630308 - L1MC/D LINE L1 -1983 4958 4879 329 251 111 67 chr5 36455220 36455476 -166630056 - L1MDa LINE L1 -4532 2409 2086 * 498 266 14 14 chr5 36455502 36455641 -166629891 - L1MDa LINE L1 -5186 1237 1099 499 349 18 40 chr5 36455744 36456016 -166629516 - L1MDa LINE L1 -5841 582 317 527 275 93 66 chr5 36456024 36456388 -166629144 + MLT1D LTR MaLR 1 374 -131 380 294 33 0 chr5 36456629 36456721 -166628811 + HERV16 LTR ERVL 6 100 -4896 936 344 72 18 chr5 36457024 36457580 -166627952 + HERV16 LTR ERVL 809 1394 -3602 1408 303 54 25 chr5 36457584 36458154 -166627378 + HERV16 LTR ERVL 1682 2323 -2776 779 235 6 45 chr5 36458269 36458448 -166627084 - AluJo SINE Alu -137 175 4 239 302 78 78 chr5 36458454 36458749 -166626783 - L2 LINE L2 -18 3295 3001 244 295 58 51 chr5 36458851 36459007 -166626525 + MLT1L LTR MaLR 127 283 -332 211 133 0 22 chr5 36459292 36459337 -166626195 + (TG)n Simple_repeat Simple_repeat 1 44 0 237 286 0 24 chr5 36459776 36459860 -166625672 - L1MC4 LINE L1 -1340 6702 6621 1452 246 57 95 chr5 36460773 36461011 -166624521 + L1ME1 LINE L1 5148 5394 -772 2373 95 3 0 chr5 36461011 36461317 -166624215 + AluSc SINE Alu 1 307 -2 1452 246 57 95 chr5 36461317 36461412 -166624120 + L1ME1 LINE L1 5394 5491 -675 2288 113 0 3 chr5 36461412 36461722 -166623810 + AluSx SINE Alu 1 309 -3 1452 246 57 95 chr5 36461722 36462425 -166623107 + L1ME1 LINE L1 5491 6148 -18 1861 115 11 4 chr5 36462495 36462755 -166622777 + AluSq SINE Alu 1 262 -51 1068 116 0 0 chr5 36462758 36462905 -166622627 + AluSp/q SINE Alu 160 306 -7 1141 198 33 67 chr5 36462905 36462930 -166622602 + L1MC4a LINE L1 6251 6275 -1533 2088 130 72 23 chr5 36462930 36463277 -166622255 - THE1B LTR MaLR 0 364 1 1141 198 33 67 chr5 36463277 36463610 -166621922 + L1MC4a LINE L1 6275 6597 -1211 886 159 147 44 chr5 36463647 36463898 -166621634 + LTR12 LTR ERV1 1 277 -437 300 242 40 30 chr5 36463898 36463997 -166621535 + LTR30 LTR ERV1 544 643 -79 640 158 0 0 chr5 36463998 36464099 -166621433 + LTR12 LTR ERV1 481 581 -133 3734 241 83 18 chr5 36464135 36465266 -166620266 + L1MC4a LINE L1 6603 7807 -1 426 20 0 0 chr5 36465334 36465385 -166620147 + (TG)n Simple_repeat Simple_repeat 2 52 0 2055 133 3 0 chr5 36465649 36465949 -166619583 - AluSx SINE Alu -11 301 1 234 252 118 35 chr5 36465993 36466306 -166619226 - L1M4 LINE L1 -3104 3042 2704 516 311 67 77 chr5 36466566 36467061 -166618471 - HAL1 LINE L1 -905 1602 1113 251 263 0 26 chr5 36467174 36467250 -166618282 - HAL1 LINE L1 -1471 1036 963 295 196 0 0 chr5 36467971 36468027 -166617505 - MER116 DNA Mariner -17 63 8 2368 74 0 43 chr5 36469215 36469540 -166615992 + AluY SINE Alu 1 311 0 568 234 122 11 chr5 36469639 36470054 -166615478 - MER69 DNA AcHobo 0 2526 1992 1533 320 13 11 chr5 36470130 36470664 -166614868 - MER69 DNA AcHobo -1870 656 122 1186 125 0 0 chr5 36470699 36470867 -166614665 - AluSx SINE Alu -9 301 134 541 163 0 0 chr5 36470867 36470953 -166614579 - AluSx SINE Alu -226 86 1 214 178 0 22 chr5 36472170 36472215 -166613317 + CT-rich Low_complexity Low_complexity 2 45 0 234 0 0 0 chr5 36472215 36472241 -166613291 + (CA)n Simple_repeat Simple_repeat 1 26 0 26 50 0 0 chr5 36472287 36472327 -166613205 + AT_rich Low_complexity Low_complexity 1 40 0 1922 221 65 68 chr5 36472469 36473025 -166612507 - MLT2B3 LTR ERVL 0 554 1 7171 106 6 4 chr5 36473025 36474020 -166611512 - HERVL-B3 LTR ERVL 0 5654 4658 6034 103 43 30 chr5 36474016 36474073 -166611459 - HERVL-B3 LTR ERVL -1710 3944 3889 * 2176 94 3 35 chr5 36474073 36474391 -166611141 - AluSc SINE Alu -1 308 1 6034 103 43 30 chr5 36474391 36475252 -166610280 - HERVL-B3 LTR ERVL -1765 3889 3014 287 250 5 165 chr5 36477067 36477148 -166608384 + MER5B DNA MER1_type 1 29 -149 1993 152 116 21 chr5 36477148 36477537 -166607995 - MSTA LTR MaLR -2 426 1 287 250 5 165 chr5 36477537 36477667 -166607865 + MER5B DNA MER1_type 29 178 0 28 61 0 0 chr5 36478812 36478861 -166606671 + AT_rich Low_complexity Low_complexity 1 49 0 5446 160 23 8 chr5 36479313 36480629 -166604903 - L1PA16 LINE L1 0 6166 4839 335 310 139 19 chr5 36480843 36481001 -166604531 + MIR SINE MIR 46 222 -40 348 64 0 0 chr5 36481293 36481340 -166604192 + (CA)n Simple_repeat Simple_repeat 1 47 0 192 179 0 0 chr5 36482312 36482351 -166603181 + CT-rich Low_complexity Low_complexity 1 39 0 1543 178 7 41 chr5 36482502 36482819 -166602713 + AluJo SINE Alu 1 307 0 880 190 91 82 chr5 36483666 36484102 -166601430 - MLT1B LTR MaLR 0 390 6 1866 63 0 67 chr5 36484635 36484926 -166600606 + AluY SINE Alu 44 317 0 2141 109 0 31 chr5 36486428 36486750 -166598782 + AluSq SINE Alu 1 312 -1 9534 27 3 210 chr5 36486951 36488710 -166596822 + SVA Other Other 7 1409 0 2017 149 0 0 chr5 36489623 36489919 -166595613 + AluSx SINE Alu 1 296 -16 479 252 111 7 chr5 36490284 36490419 -166595113 + MLT1A2 LTR MaLR 27 175 -199 205 250 16 16 chr5 36490422 36490486 -166595046 + C-rich Low_complexity Low_complexity 4 67 0 2193 122 0 13 chr5 36490616 36490927 -166594605 + AluSx SINE Alu 1 307 -5 239 167 33 0 chr5 36491065 36491125 -166594407 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 24 0 0 0 chr5 36491227 36491251 -166594281 + AT_rich Low_complexity Low_complexity 1 24 0 853 54 9 0 chr5 36492985 36493096 -166592436 - L1PA4 LINE L1 -2 6153 6042 2261 121 36 6 chr5 36493096 36493456 -166592076 - L1PA15 LINE L1 -4 6161 5788 1818 159 4 0 chr5 36494079 36494359 -166591173 + AluSx SINE Alu 1 281 -31 217 0 0 0 chr5 36494359 36494383 -166591149 + (CAA)n Simple_repeat Simple_repeat 1 180 0 342 247 0 12 chr5 36495036 36495121 -166590411 + MLT1I LTR MaLR 326 409 0 2199 110 0 0 chr5 36495821 36496113 -166589419 + AluSx SINE Alu 1 292 -20 250 329 0 0 chr5 36496562 36496635 -166588897 - MIR SINE MIR -1 261 189 440 347 40 36 chr5 36497921 36498195 -166587337 + MLT1J LTR MaLR 37 311 -200 2093 117 0 10 chr5 36498722 36499013 -166586519 - AluSx SINE Alu -24 288 1 965 254 177 21 chr5 36499181 36499566 -166585966 - MLT2B1 LTR ERVL -70 450 6 2021 133 0 3 chr5 36500051 36500337 -166585195 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr5 36500347 36500373 -166585159 + AT_rich Low_complexity Low_complexity 1 26 0 341 346 44 15 chr5 36500593 36500729 -166584803 + MIR3 SINE MIR 20 159 -49 378 363 81 42 chr5 36501518 36501851 -166583681 - L2 LINE L2 -31 3241 2896 2119 129 38 32 chr5 36502808 36503132 -166582400 + THE1C LTR MaLR 1 329 -46 1828 137 74 37 chr5 36503132 36503483 -166582049 - THE1B LTR MaLR 0 364 1 2119 129 38 32 chr5 36503483 36503531 -166582001 + THE1C LTR MaLR 329 375 0 246 348 116 49 chr5 36504496 36504763 -166580769 + L3 LINE CR1 243 527 -1050 1527 166 80 9 chr5 36505253 36505602 -166579930 - L1MA8 LINE L1 -4 6287 5914 716 220 65 0 chr5 36505670 36505746 -166579786 + L1MA9 LINE L1 6077 6147 -165 264 30 0 0 chr5 36505746 36505779 -166579753 + (CA)n Simple_repeat Simple_repeat 2 34 0 716 220 65 0 chr5 36505779 36505888 -166579644 + L1MA9 LINE L1 6147 6274 -38 8553 139 16 6 chr5 36508928 36511140 -166574392 - L1PA10 LINE L1 -5 6163 3919 999 135 13 0 chr5 36511141 36511297 -166574235 + L1P LINE L1 3573 3730 -2416 717 97 18 9 chr5 36511297 36511410 -166574122 - MLT2B2 LTR ERVL -401 114 1 205 255 0 0 chr5 36511570 36511621 -166573911 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 204 97 0 0 chr5 36512023 36512054 -166573478 + (CAT)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr5 36513031 36513056 -166572476 + AT_rich Low_complexity Low_complexity 1 25 0 221 239 14 42 chr5 36513078 36513220 -166572312 + (TTTA)n Simple_repeat Simple_repeat 1 138 0 249 188 62 0 chr5 36514019 36514115 -166571417 + (TA)n Simple_repeat Simple_repeat 2 103 0 24 0 0 0 chr5 36514678 36514702 -166570830 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 36515277 36515299 -166570233 + AT_rich Low_complexity Low_complexity 1 22 0 202 367 143 0 chr5 36516316 36516414 -166569118 - MIR SINE MIR -96 166 55 1142 142 69 37 chr5 36516852 36517070 -166568462 - AluJb SINE Alu -1 311 87 2472 91 0 0 chr5 36517426 36517735 -166567797 + AluSc SINE Alu 1 309 0 2218 52 0 0 chr5 36518439 36518710 -166566822 + AluY SINE Alu 30 300 -11 1106 185 19 14 chr5 36519377 36519593 -166565939 - AluJo SINE Alu -14 298 82 26 0 0 0 chr5 36521623 36521649 -166563883 + AT_rich Low_complexity Low_complexity 1 26 0 242 356 59 17 chr5 36521864 36521982 -166563550 + L2 LINE L2 3147 3269 -3 966 213 0 14 chr5 36522038 36522245 -166563287 - L1PB4 LINE L1 -1 6155 5952 291 336 96 52 chr5 36522843 36523072 -166562460 - MER102a DNA MER1_type 0 330 92 1475 227 98 16 chr5 36523125 36523491 -166562041 - MSTD LTR MaLR 0 396 1 23 33 0 0 chr5 36523658 36523688 -166561844 + AT_rich Low_complexity Low_complexity 1 30 0 4505 278 69 30 chr5 36523839 36525743 -166559789 - L1MCa LINE L1 -1597 4967 3140 2331 83 0 0 chr5 36525743 36526043 -166559489 - AluY SINE Alu -11 300 1 4505 278 69 30 chr5 36526043 36527072 -166558460 - L1MCa LINE L1 -3424 3140 2153 1860 114 4 4 chr5 36527072 36527336 -166558196 - AluSx SINE Alu 0 312 49 4505 278 69 30 chr5 36527336 36528491 -166557041 - L1MCa LINE L1 -4411 2153 570 393 331 46 61 chr5 36528759 36529022 -166556510 - L1MCa LINE L1 -5613 432 174 3615 186 56 6 chr5 36529052 36529750 -166555782 + ERVL-B1 LTR ERVL 3212 3944 -1820 7652 185 71 38 chr5 36529768 36531178 -166554354 + ERVL-B1 LTR ERVL 4066 5538 -226 2344 140 19 73 chr5 36531178 36531635 -166553897 - L1MA8 LINE L1 -18 6273 5846 1877 160 16 0 chr5 36531635 36531941 -166553591 - AluJb SINE Alu -1 311 1 2344 140 19 73 chr5 36531941 36532003 -166553529 - L1MA8 LINE L1 -445 5846 5782 7652 185 71 38 chr5 36532003 36532231 -166553301 + ERVL-B1 LTR ERVL 5538 5757 -7 858 254 21 0 chr5 36532231 36532420 -166553112 + MLT2B1 LTR ERVL 1 193 -327 801 244 6 0 chr5 36532403 36532579 -166552953 + MLT2B2 LTR ERVL 339 515 0 * 590 223 18 0 chr5 36532929 36533041 -166552491 - MER81 DNA DNA 0 114 1 2413 197 36 53 chr5 36534029 36534558 -166550974 - MLT2B1 LTR ERVL 0 520 1 572 307 67 4 chr5 36534573 36534798 -166550734 - LTR16A LTR ERVL 0 450 212 2043 133 0 0 chr5 36534913 36535224 -166550308 + AluSq SINE Alu 1 311 0 280 267 12 0 chr5 36535240 36535326 -166550206 - LTR16A LTR ERVL -343 107 21 22 35 0 0 chr5 36536381 36536410 -166549122 + AT_rich Low_complexity Low_complexity 1 29 0 22 99 0 0 chr5 36537089 36537160 -166548372 + AT_rich Low_complexity Low_complexity 1 71 0 640 175 45 126 chr5 36537294 36537517 -166548015 + L1MA9 LINE L1 6070 6274 -38 29 28 0 0 chr5 36537517 36537553 -166547979 + AT_rich Low_complexity Low_complexity 1 36 0 2438 65 7 0 chr5 36538226 36538534 -166546998 - AluY SINE Alu 0 311 2 198 0 0 0 chr5 36539314 36539336 -166546196 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 458 231 149 8 chr5 36541306 36541440 -166544092 - MLT1J2 LTR MaLR -234 216 64 22 35 0 0 chr5 36541598 36541627 -166543905 + AT_rich Low_complexity Low_complexity 1 29 0 305 85 0 21 chr5 36541730 36541777 -166543755 - Alu SINE Alu -13 288 243 242 208 19 0 chr5 36541765 36541818 -166543714 - AluSg/x SINE Alu -133 167 114 * 2203 102 7 0 chr5 36542471 36542766 -166542766 + AluSc SINE Alu 1 297 -12 2263 115 0 0 chr5 36542771 36543075 -166542457 + AluSq SINE Alu 1 304 -9 1310 129 0 15 chr5 36544453 36544655 -166540877 - THE1-int LTR MaLR -262 1318 1120 468 145 3 0 chr5 36545283 36545385 -166540147 - L1P5 LINE L1 -448 5708 5606 23 33 0 0 chr5 36545478 36545508 -166540024 + AT_rich Low_complexity Low_complexity 1 30 0 408 182 40 30 chr5 36546002 36546101 -166539431 - MER53 DNA DNA -88 101 2 757 269 74 52 chr5 36546484 36546889 -166538643 - L2 LINE L2 -71 3242 2829 290 181 0 28 chr5 36546957 36547029 -166538503 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 654 79 0 20 chr5 36547079 36547180 -166538352 + MER4A LTR ERV1 1 99 -565 1423 146 211 38 chr5 36547180 36547522 -166538010 + MER4A LTR ERV1 262 662 -2 626 303 89 16 chr5 36547523 36547837 -166537695 - L2 LINE L2 -518 2796 2460 287 206 33 76 chr5 36549386 36549478 -166536054 - L2 LINE L2 0 3313 3226 829 303 100 31 chr5 36549816 36549880 -166535652 - L2 LINE L2 -8 3305 3247 1991 116 0 0 chr5 36549880 36550156 -166535376 + AluSx SINE Alu 31 306 -6 829 303 100 31 chr5 36550156 36550481 -166535051 - L2 LINE L2 -66 3247 2889 1512 221 0 26 chr5 36550874 36551177 -166534355 + AluJo SINE Alu 1 295 -17 204 200 0 0 chr5 36551195 36551240 -166534292 + (CATA)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr5 36552221 36552249 -166533283 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2386 45 0 10 chr5 36552252 36552542 -166532990 - AluY SINE Alu -24 287 1 1732 97 32 4 chr5 36552738 36552986 -166532546 - AluSx SINE Alu -12 300 46 1051 184 25 72 chr5 36552986 36553340 -166532192 - MER31A LTR ERV1 -48 437 7 197 196 22 0 chr5 36553409 36553455 -166532077 + L2 LINE L2 3265 3311 -2 227 237 35 44 chr5 36553623 36553737 -166531795 - MLT1K LTR MaLR -115 473 361 381 269 47 34 chr5 36553814 36553963 -166531569 - MLT1K LTR MaLR -340 248 98 204 349 30 0 chr5 36554057 36554123 -166531409 - L2 LINE L2 -273 2999 2932 21 0 0 0 chr5 36554347 36554368 -166531164 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 36555040 36555079 -166530453 + AT_rich Low_complexity Low_complexity 1 39 0 249 250 53 38 chr5 36555520 36555652 -166529880 + MLT1I LTR MaLR 1 134 -275 414 285 6 24 chr5 36556266 36556431 -166529101 - MER46C DNA MER2_type -29 309 148 2979 209 78 73 chr5 36557585 36557939 -166527593 - Charlie1 DNA MER1_type -16 2745 2394 2361 58 41 0 chr5 36557939 36558234 -166527298 + AluY SINE Alu 1 307 -4 2979 209 78 73 chr5 36558234 36559119 -166526413 - Charlie1 DNA MER1_type -367 2394 1500 253 241 0 0 chr5 36559141 36559195 -166526337 - Charlie1 DNA MER1_type -2705 56 3 2124 123 7 0 chr5 36560725 36561027 -166524505 + AluSx SINE Alu 1 304 -8 2203 75 7 4 chr5 36561645 36561926 -166523606 + AluSg SINE Alu 1 282 -28 231 88 0 0 chr5 36562034 36562068 -166523464 + (CA)n Simple_repeat Simple_repeat 2 35 0 254 354 19 21 chr5 36562116 36562235 -166523297 - MIR SINE MIR -87 121 4 312 317 21 21 chr5 36562434 36562630 -166522902 + L1ME1 LINE L1 5972 6163 -1 399 342 35 26 chr5 36564449 36564677 -166520855 - L2 LINE L2 -359 2955 2726 21 0 0 0 chr5 36565426 36565447 -166520085 + AT_rich Low_complexity Low_complexity 1 21 0 310 302 112 12 chr5 36565896 36566065 -166519467 + L1 LINE L1 3816 4001 -2145 886 133 55 17 chr5 36566163 36566344 -166519188 + MLT2C2 LTR ERVL 1 188 -276 5231 51 1 5 chr5 36566349 36567011 -166518521 - L1PA5 LINE L1 0 6154 5495 1844 152 42 51 chr5 36567346 36567892 -166517640 - pTR5 LTR ERV1 -1155 1283 743 24 0 0 0 chr5 36568714 36568738 -166516794 + AT_rich Low_complexity Low_complexity 1 24 0 685 183 33 22 chr5 36569367 36569547 -166515985 - L1MC3 LINE L1 -19 7766 7585 1685 182 92 8 chr5 36570020 36570389 -166515143 + MSTB LTR MaLR 27 426 0 800 247 18 40 chr5 36570534 36570761 -166514771 + MER8 DNA MER2_type 18 239 0 1111 221 88 15 chr5 36571102 36571442 -166514090 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr5 36571446 36571466 -166514066 + (A)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 36571524 36571547 -166513985 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4282 146 18 8 chr5 36571547 36571920 -166513612 - L1PA16 LINE L1 0 6166 5798 306 0 0 0 chr5 36571920 36571954 -166513578 + (TG)n Simple_repeat Simple_repeat 2 35 0 4282 146 18 8 chr5 36571954 36572353 -166513179 - L1PA16 LINE L1 -368 5798 5386 1384 97 0 0 chr5 36573001 36573208 -166512324 + L1PA13 LINE L1 5968 6174 0 300 273 87 77 chr5 36573420 36573603 -166511929 - L1ME3A LINE L1 -23 6147 5963 482 132 13 0 chr5 36574059 36574135 -166511397 - MADE1 DNA Mariner -2 78 2 264 272 33 0 chr5 36574476 36574568 -166510964 + LTR16A1 LTR ERVL 43 137 -320 533 151 25 34 chr5 36574677 36574796 -166510736 + L1MB1 LINE L1 4561 4678 -1468 3880 193 45 4 chr5 36574799 36576069 -166509463 + L1MB1 LINE L1 4835 6165 -3 240 86 0 0 chr5 36576307 36576342 -166509190 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1298 190 68 45 chr5 36576382 36576692 -166508840 + MLT1A1 LTR MaLR 5 325 -40 2336 130 8 13 chr5 36576692 36577069 -166508463 - THE1C LTR MaLR 0 375 1 1298 190 68 45 chr5 36577069 36577111 -166508421 + MLT1A1 LTR MaLR 325 365 0 1339 164 94 42 chr5 36577686 36578016 -166507516 - MSTB1 LTR MaLR -13 419 73 422 151 12 12 chr5 36578257 36578343 -166507189 - MSTB1 LTR MaLR -346 86 1 27 0 0 0 chr5 36578434 36578461 -166507071 + AT_rich Low_complexity Low_complexity 1 27 0 1871 104 4 22 chr5 36578774 36579042 -166506490 + AluSq SINE Alu 35 297 -16 317 284 0 0 chr5 36579444 36579518 -166506014 - MER2 DNA MER2_type 0 345 272 794 211 0 17 chr5 36579604 36579779 -166505753 - MER2 DNA MER2_type -172 173 2 1674 181 3 47 chr5 36579826 36580147 -166505385 - AluJb SINE Alu -5 307 1 341 191 0 0 chr5 36580288 36580351 -166505181 + MSTD LTR MaLR 15 77 -319 943 221 0 0 chr5 36580355 36580527 -166505005 - FRAM SINE Alu 0 176 5 4697 59 0 1 chr5 36580972 36581770 -166503762 - L1P2 LINE L1 -605 5549 4753 657 191 29 69 chr5 36581777 36581950 -166503582 + MLT2C1 LTR ERVL 188 353 -44 610 125 44 15 chr5 36582059 36582265 -166503267 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 271 119 0 0 chr5 36582265 36582307 -166503225 + MLT2C1 LTR ERVL 417 458 -6 490 116 23 0 chr5 36582751 36582837 -166502695 + L1MA1 LINE L1 6215 6302 0 2377 135 28 26 chr5 36583155 36583498 -166502034 - L1MA3 LINE L1 0 6305 5959 252 0 0 0 chr5 36583498 36583526 -166502006 + (TA)n Simple_repeat Simple_repeat 2 29 0 2377 135 28 26 chr5 36583526 36583642 -166501890 - L1MA3 LINE L1 -346 5959 5845 2171 165 92 8 chr5 36583770 36584163 -166501369 - MSTA LTR MaLR 0 428 3 275 318 110 35 chr5 36585177 36585350 -166500182 - L2 LINE L2 -1 3271 3086 496 163 87 0 chr5 36586077 36586169 -166499363 - Tigger3(Golem) DNA MER2_type -1 3028 2929 403 238 10 0 chr5 36586174 36586275 -166499257 - HERVL40 LTR ERVL -948 4582 4481 2727 147 129 17 chr5 36586277 36586929 -166498603 - Tigger3(Golem) DNA MER2_type -95 2934 2210 282 56 0 0 chr5 36587173 36587209 -166498323 + (CA)n Simple_repeat Simple_repeat 1 36 0 1928 269 43 65 chr5 36587286 36588214 -166497318 - HERVL40 LTR ERVL -115 5415 4508 548 271 68 6 chr5 36588208 36588549 -166496983 - HERVL40 LTR ERVL -960 4570 4191 * 2066 275 81 36 chr5 36588871 36589838 -166495694 - HERVL40 LTR ERVL -1472 4058 3049 706 277 40 16 chr5 36590052 36590301 -166495231 - HERVL40 LTR ERVL -2497 3033 2779 2027 158 34 8 chr5 36591158 36591544 -166493988 - MER57A LTR ERV1 0 403 8 495 281 62 65 chr5 36591549 36591809 -166493723 - HERVL40 LTR ERVL -4307 1223 965 611 389 42 0 chr5 36592121 36592404 -166493128 - L2 LINE L2 -527 2787 2493 34 0 0 0 chr5 36593026 36593060 -166492472 + AT_rich Low_complexity Low_complexity 1 34 0 3955 137 74 55 chr5 36594617 36595574 -166489958 - pTR5 LTR ERV1 0 2606 1524 306 0 0 0 chr5 36595980 36596014 -166489518 + (TC)n Simple_repeat Simple_repeat 1 34 0 396 0 0 0 chr5 36596015 36596059 -166489473 + (TG)n Simple_repeat Simple_repeat 2 45 0 1848 198 68 5 chr5 36596110 36596478 -166489054 + MSTD LTR MaLR 1 391 -5 2205 119 6 3 chr5 36598029 36598341 -166487191 - AluSq SINE Alu 0 313 1 1675 184 0 13 chr5 36598370 36598686 -166486846 - AluJo SINE Alu 0 312 1 32 0 0 0 chr5 36598978 36599010 -166486522 + AT_rich Low_complexity Low_complexity 1 32 0 838 137 0 34 chr5 36599160 36599306 -166486226 - LTR39 LTR ERV1 -605 178 38 317 214 0 0 chr5 36599977 36600047 -166485485 + MLT1L LTR MaLR 539 608 -7 285 287 32 69 chr5 36600056 36600244 -166485288 + L2 LINE L2 1746 1926 -1388 2074 104 45 3 chr5 36600284 36600573 -166484959 - AluSq SINE Alu -12 301 1 284 344 71 50 chr5 36600815 36601138 -166484394 + L2 LINE L2 2266 2595 -719 1027 226 84 25 chr5 36601500 36601823 -166483709 + MER2 DNA MER2_type 2 343 -1 2357 87 3 0 chr5 36602412 36602722 -166482810 + AluY SINE Alu 1 311 0 879 262 34 86 chr5 36602944 36603329 -166482203 + MLT1A1 LTR MaLR 1 365 0 5465 192 60 48 chr5 36603454 36604303 -166481229 + L1MCa LINE L1 19 891 -5535 216 97 0 0 chr5 36604303 36604334 -166481198 + (CA)n Simple_repeat Simple_repeat 2 32 0 5465 192 60 48 chr5 36604334 36604803 -166480729 + L1MCa LINE L1 891 1353 -5073 6245 98 16 3 chr5 36604891 36605790 -166479742 + L1PA10 LINE L1 5254 6163 -5 5531 271 78 20 chr5 36605806 36607617 -166477915 + L1MC1 LINE L1 1212 2917 -3509 1855 173 144 5 chr5 36607617 36607993 -166477539 - MSTA LTR MaLR 0 428 1 5531 271 78 20 chr5 36607993 36608740 -166476792 + L1MC1 LINE L1 2917 5073 -1353 3146 172 47 10 chr5 36608739 36609510 -166476022 + L1MC1 LINE L1 5386 6177 -436 * 1273 66 6 11 chr5 36609654 36609835 -166475697 + AluY SINE Alu 126 305 -6 243 0 0 0 chr5 36610214 36610241 -166475291 + (TG)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 36612006 36612032 -166473500 + AT_rich Low_complexity Low_complexity 1 26 0 1729 185 3 0 chr5 36612191 36612478 -166473054 - AluSx SINE Alu -16 296 9 254 325 52 56 chr5 36612721 36612970 -166472562 + MER102b DNA MER1_type 84 331 -10 41819 38 24 2 chr5 36612987 36619004 -166466528 + L1PA3 LINE L1 2 6155 0 1413 201 64 56 chr5 36619336 36619729 -166465803 - MSTD LTR MaLR 0 396 1 1254 19 6 19 chr5 36619877 36620036 -166465496 - L1PA4 LINE L1 0 6155 5999 503 203 45 45 chr5 36620318 36620451 -166465081 + L1MA9 LINE L1 6140 6272 -40 32 57 0 0 chr5 36620695 36620748 -166464784 + AT_rich Low_complexity Low_complexity 1 53 0 879 169 0 12 chr5 36620893 36621053 -166464479 + L1PB3 LINE L1 5995 6152 -2 3699 82 8 6 chr5 36621282 36621792 -166463740 - MER9 LTR ERVK 0 511 1 224 250 0 0 chr5 36622973 36623025 -166462507 + A-rich Low_complexity Low_complexity 1 52 0 25 65 0 0 chr5 36624108 36624154 -166461378 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 36625243 36625272 -166460260 + AT_rich Low_complexity Low_complexity 1 29 0 417 300 70 25 chr5 36625282 36625482 -166460050 + L1ME1 LINE L1 5952 6160 -6 1195 231 140 3 chr5 36625989 36626310 -166459222 - MLT1A1 LTR MaLR 0 365 1 266 356 132 15 chr5 36627568 36627773 -166457759 + MIR SINE MIR 2 230 -32 21 0 0 0 chr5 36628454 36628475 -166457057 + AT_rich Low_complexity Low_complexity 1 21 0 951 241 22 0 chr5 36628659 36628937 -166456595 - MER33 DNA MER1_type -15 309 26 188 301 114 78 chr5 36629759 36629853 -166455679 + L3 LINE CR1 802 906 -671 671 162 62 22 chr5 36629853 36630032 -166455500 + MER53 DNA DNA 1 186 -3 188 301 114 78 chr5 36630032 36630103 -166455429 + L3 LINE CR1 906 973 -604 182 342 26 0 chr5 36630256 36630332 -166455200 + L3 LINE CR1 1219 1296 -281 26 50 0 0 chr5 36630467 36630507 -166455025 + AT_rich Low_complexity Low_complexity 1 40 0 28 86 0 0 chr5 36630601 36630671 -166454861 + AT_rich Low_complexity Low_complexity 1 70 0 721 307 194 2 chr5 36631539 36631956 -166453576 - L2 LINE L2 -3 3310 2814 496 344 70 43 chr5 36632650 36633287 -166452245 + L2 LINE L2 2652 3311 -2 1979 143 0 3 chr5 36634158 36634501 -166451031 + AluSx SINE Alu 7 348 0 297 324 10 0 chr5 36635018 36635120 -166450412 + L1ME LINE L1 5543 5645 -476 186 43 0 0 chr5 36636891 36636914 -166448618 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2605 296 102 41 chr5 36636958 36638105 -166447427 + L1MDb LINE L1 12 1228 -5181 2798 250 80 31 chr5 36638127 36639317 -166446215 + L1MDb LINE L1 1353 2613 -3793 238 258 166 65 chr5 36639472 36639689 -166445843 - Charlie8 DNA MER1_type -1004 1413 77 213 342 39 22 chr5 36640848 36640999 -166444533 + MIR3 SINE MIR 18 172 -36 27 0 0 0 chr5 36641206 36641233 -166444299 + AT_rich Low_complexity Low_complexity 1 27 0 24 67 0 0 chr5 36641353 36641398 -166444134 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 36641454 36641476 -166444056 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr5 36642598 36642645 -166442887 + AT_rich Low_complexity Low_complexity 1 47 0 1928 135 56 36 chr5 36642664 36643020 -166442512 + THE1B LTR MaLR 1 363 -1 10582 119 11 4 chr5 36643021 36644590 -166440942 + THE1B-int LTR MaLR 1 1580 0 2086 128 47 36 chr5 36644590 36644950 -166440582 + THE1B LTR MaLR 1 364 0 237 100 0 0 chr5 36645162 36645202 -166440330 - L1MA3 LINE L1 -8 6297 6258 * 326 167 0 0 chr5 36645198 36645258 -166440274 + L1MA1 LINE L1 5952 6011 -291 242 299 142 16 chr5 36645274 36645401 -166440131 - MIR SINE MIR -64 198 56 25 83 0 0 chr5 36645597 36645657 -166439875 + AT_rich Low_complexity Low_complexity 1 60 0 24 0 0 0 chr5 36646448 36646472 -166439060 + AT_rich Low_complexity Low_complexity 1 24 0 1067 265 92 35 chr5 36646492 36646862 -166438670 - L1MC4 LINE L1 -1039 7003 6613 4453 79 11 2 chr5 36646879 36647502 -166438030 - L1PA7 LINE L1 0 6154 5526 5098 100 13 16 chr5 36647503 36648271 -166437261 + L1P LINE L1 1754 2519 -3627 2247 103 3 0 chr5 36648268 36648589 -166436943 + L1P LINE L1 3554 3875 -2271 * 27 62 0 0 chr5 36649280 36649328 -166436204 + AT_rich Low_complexity Low_complexity 1 48 0 32 43 0 0 chr5 36649826 36649872 -166435660 + AT_rich Low_complexity Low_complexity 1 46 0 628 138 62 8 chr5 36649872 36650002 -166435530 - L1MA8 LINE L1 -20 6271 6135 279 337 68 0 chr5 36651292 36651482 -166434050 + L1ME LINE L1 5488 5690 -431 1862 136 0 27 chr5 36651795 36652096 -166433436 + AluSx SINE Alu 3 295 -17 303 324 54 18 chr5 36652305 36652527 -166433005 + L1MC/D LINE L1 5315 5544 -2264 363 250 16 32 chr5 36652568 36652692 -166432840 + L1MEc LINE L1 35 156 -6240 890 257 85 20 chr5 36652725 36653079 -166432453 - MLT1C LTR MaLR -32 435 59 1053 217 110 82 chr5 36653086 36653450 -166432082 + MLT1A2 LTR MaLR 1 374 0 579 351 82 53 chr5 36653502 36654072 -166431460 + L1MEc LINE L1 216 802 -5594 365 256 57 11 chr5 36654098 36654274 -166431258 + L1MEc LINE L1 903 1086 -5310 1364 228 39 75 chr5 36654283 36654721 -166430811 + MSTB2 LTR MaLR 19 440 -17 664 299 96 47 chr5 36654735 36655520 -166430012 + L1MEc LINE L1 1084 1906 -4490 1112 167 99 30 chr5 36655531 36655655 -166429877 - L1M3 LINE L1 -484 5684 5570 1852 133 26 47 chr5 36655655 36656037 -166429495 - THE1C LTR MaLR -1 374 1 1112 167 99 30 chr5 36656037 36656145 -166429387 - L1M3 LINE L1 -598 5570 5436 772 230 11 17 chr5 36656151 36656325 -166429207 - FRAM SINE Alu -4 172 1 1181 175 41 12 chr5 36656330 36656671 -166428861 - L1M3 LINE L1 -743 5403 5087 1973 166 93 0 chr5 36656728 36657095 -166428437 + LTR42 LTR ERVL 71 471 -24 438 225 9 54 chr5 36657120 36657231 -166428301 + L1MA10 LINE L1 5675 5780 -388 324 188 0 0 chr5 36657231 36657300 -166428232 + (TG)n Simple_repeat Simple_repeat 2 70 0 242 213 0 0 chr5 36657305 36657352 -166428180 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 2300 179 60 23 chr5 36657352 36657883 -166427649 + L1MA10 LINE L1 5783 6333 -1 1268 246 105 30 chr5 36657885 36658586 -166426946 + L1MEc LINE L1 1970 2690 -3525 202 206 29 0 chr5 36659304 36659372 -166426160 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 276 35 0 chr5 36659380 36659467 -166426065 + L1MC4 LINE L1 6614 6703 -1339 682 211 11 11 chr5 36659480 36659660 -166425872 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 256 236 22 22 chr5 36659678 36659767 -166425765 - L1MC4 LINE L1 -1340 6702 6614 256 271 0 21 chr5 36659778 36659874 -166425658 - L1MC4 LINE L1 -1340 6702 6609 743 329 104 31 chr5 36661066 36661546 -166423986 + L2 LINE L2 2397 2911 -403 5268 144 78 34 chr5 36661555 36661890 -166423642 - Tigger3b DNA MER2_type -1797 1231 912 203 61 30 0 chr5 36661890 36661923 -166423609 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5268 144 78 34 chr5 36661923 36662663 -166422869 - Tigger3b DNA MER2_type -2116 912 109 288 353 41 0 chr5 36662746 36662868 -166422664 + L2 LINE L2 3182 3308 -5 475 70 76 29 chr5 36663108 36663279 -166422253 + (TA)n Simple_repeat Simple_repeat 1 179 0 2112 125 0 0 chr5 36663280 36663575 -166421957 - AluSx SINE Alu -16 296 2 3294 194 14 14 chr5 36663617 36664322 -166421210 - L1MB3 LINE L1 -3 6180 5476 1767 212 37 47 chr5 36664344 36665027 -166420505 - L1M3 LINE L1 -657 5762 5083 670 262 37 13 chr5 36665009 36665307 -166420225 - L1M3 LINE L1 -2763 3619 3315 * 815 140 173 0 chr5 36665307 36665457 -166420075 - AluSg/x SINE Alu 0 310 135 9256 193 80 28 chr5 36665468 36666645 -166418887 - L1M3 LINE L1 -3114 3268 2154 1527 205 6 22 chr5 36666645 36666962 -166418570 - AluJb SINE Alu 0 312 1 9256 193 80 28 chr5 36666962 36667443 -166418089 - L1M3 LINE L1 -4228 2154 1699 207 0 0 0 chr5 36667443 36667466 -166418066 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9256 193 80 28 chr5 36667466 36668605 -166416927 - L1M3 LINE L1 -4683 1699 320 2130 105 0 0 chr5 36669262 36669539 -166415993 + AluSx SINE Alu 27 303 -9 234 211 53 0 chr5 36671525 36671601 -166413931 + (TTA)n Simple_repeat Simple_repeat 3 82 0 1432 238 85 21 chr5 36672168 36672593 -166412939 + MLT1C LTR MaLR 3 454 -13 1922 103 0 4 chr5 36672992 36673253 -166412279 + AluSg SINE Alu 39 298 -12 2495 113 3 3 chr5 36674508 36674872 -166410660 + THE1B LTR MaLR 1 364 0 184 171 0 24 chr5 36675248 36675289 -166410243 + L2 LINE L2 3270 3309 -4 24 53 0 0 chr5 36676431 36676469 -166409063 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 36676503 36676525 -166409007 + (TA)n Simple_repeat Simple_repeat 2 23 0 240 211 0 18 chr5 36677475 36677532 -166408000 + MER58 DNA MER1_type 53 108 -2312 818 249 129 11 chr5 36677844 36678217 -166407315 + L1MC/D LINE L1 4586 5002 -1144 4643 117 11 4 chr5 36678220 36678922 -166406610 + L1MA1 LINE L1 5408 6114 -188 419 169 13 0 chr5 36678922 36678999 -166406533 - MADE1 DNA Mariner 0 80 3 1155 130 5 0 chr5 36679000 36679184 -166406348 + L1MA1 LINE L1 6112 6296 -6 391 254 70 5 chr5 36679202 36679403 -166406129 + L1MC/D LINE L1 4993 5206 -940 611 201 60 0 chr5 36679407 36679591 -166405941 + L1MC/D LINE L1 5256 5450 -2592 421 86 0 0 chr5 36730291 36730349 -166355183 + THE1C LTR MaLR 2 59 -316 2078 140 56 8 chr5 36730360 36730717 -166354815 + THE1C LTR MaLR 1 374 -1 1492 176 31 0 chr5 36730988 36731278 -166354254 + L1MA5A LINE L1 4685 4983 -1163 673 122 9 0 chr5 36731296 36731403 -166354129 - L1M LINE L1 -875 5428 5321 5919 139 38 44 chr5 36731742 36733058 -166352474 + L1MA5A LINE L1 4960 6291 -6 26 50 0 0 chr5 36733058 36733098 -166352434 + AT_rich Low_complexity Low_complexity 1 40 0 28 48 0 0 chr5 36733189 36733231 -166352301 + AT_rich Low_complexity Low_complexity 1 42 0 289 337 10 31 chr5 36735165 36735263 -166350269 + MIR SINE MIR 6 101 -161 4532 85 6 14 chr5 36735775 36736420 -166349112 + L1PA10 LINE L1 5528 6167 -1 196 355 0 0 chr5 36737071 36737133 -166348399 + MIR SINE MIR 49 110 -152 2134 209 0 7 chr5 36737209 36737615 -166347917 - ERVL LTR ERVL -444 5320 4918 3970 244 45 10 chr5 36737617 36738580 -166346952 - ERVL LTR ERVL -953 4811 3816 5095 140 35 6 chr5 36738939 36740017 -166345515 + L1PA16 LINE L1 5063 6166 0 1938 132 13 3 chr5 36740419 36740729 -166344803 + HSMAR2 DNA Mariner 2 314 -988 2516 71 0 0 chr5 36740729 36741040 -166344492 + AluY SINE Alu 1 311 0 3414 190 29 1 chr5 36741047 36741714 -166343818 + HSMAR2 DNA Mariner 617 1301 -1 21 0 0 0 chr5 36741875 36741896 -166343636 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr5 36742954 36743007 -166342525 + AT_rich Low_complexity Low_complexity 1 53 0 509 333 156 20 chr5 36743756 36744198 -166341334 - L2 LINE L2 0 3313 2812 3236 78 2 7 chr5 36744203 36744653 -166340879 - LTR7 LTR ERV1 -2 448 1 2513 80 49 13 chr5 36744653 36745041 -166340491 - HERVH LTR ERV1 0 7713 7312 1352 139 19 0 chr5 36745031 36745247 -166340285 - HERVH LTR ERV1 -1894 5819 5600 * 4165 154 1 1 chr5 36745248 36745910 -166339622 - HERVH LTR ERV1 -2564 5149 4488 3264 122 6 6 chr5 36745913 36746414 -166339118 - HERVH LTR ERV1 -3721 3992 3492 946 133 7 0 chr5 36746404 36746554 -166338978 - HERVH LTR ERV1 -4423 3290 3140 * 19998 98 16 10 chr5 36746533 36749511 -166336021 - HERVH LTR ERV1 -4718 2995 1 3208 74 11 7 chr5 36749513 36749959 -166335573 - LTR7 LTR ERV1 -2 448 1 301 337 57 34 chr5 36749993 36750168 -166335364 - L2 LINE L2 -534 2780 2602 293 234 16 16 chr5 36750508 36750572 -166334960 + L2 LINE L2 2985 3048 -224 1394 212 79 6 chr5 36750861 36751201 -166334331 - MLT1A1 LTR MaLR 0 365 1 27 0 0 0 chr5 36751467 36751494 -166334038 + AT_rich Low_complexity Low_complexity 1 27 0 1663 259 56 51 chr5 36752963 36753605 -166331927 - L1ME1 LINE L1 -5 6173 5526 1440 286 58 68 chr5 36753630 36754665 -166330867 - L1M2 LINE L1 -4292 2666 1229 21 0 0 0 chr5 36754948 36754969 -166330563 + AT_rich Low_complexity Low_complexity 1 21 0 414 152 15 0 chr5 36755995 36756061 -166329471 + AluS SINE Alu 3 69 -234 8767 263 71 50 chr5 36756194 36756489 -166329043 - ERVL LTR ERVL -2281 3483 3196 7169 50 0 0 chr5 36756489 36757318 -166328214 + LTR5 LTR ERVK 1 829 -140 8767 263 71 50 chr5 36757318 36757421 -166328111 - ERVL LTR ERVL -2568 3196 3097 1749 45 0 0 chr5 36757421 36757622 -166327910 + LTR5 LTR ERVK 769 969 0 8767 263 71 50 chr5 36757622 36760137 -166325395 - ERVL LTR ERVL -2667 3097 508 2173 210 72 98 chr5 36760463 36761168 -166324364 - LTR8A LTR ERV1 -7 720 34 684 183 8 8 chr5 36761421 36761541 -166323991 + FLAM_A SINE Alu 1 120 -13 2352 91 0 3 chr5 36762091 36762398 -166323134 + AluSq SINE Alu 1 306 -7 1623 186 3 72 chr5 36762486 36762862 -166322670 - MLT1B LTR MaLR 0 390 41 216 0 0 0 chr5 36763371 36763395 -166322137 + (AAATG)n Simple_repeat Simple_repeat 3 26 0 186 43 0 0 chr5 36763707 36763730 -166321802 + (TA)n Simple_repeat Simple_repeat 2 24 0 180 77 0 0 chr5 36765198 36765224 -166320308 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 345 110 0 200 chr5 36765282 36765382 -166320150 - MADE1 DNA Mariner 0 80 1 1935 125 28 0 chr5 36766769 36767058 -166318474 + AluSx SINE Alu 1 297 -15 207 100 0 0 chr5 36768430 36768460 -166317072 + (T)n Simple_repeat Simple_repeat 1 30 0 557 224 31 25 chr5 36770893 36771054 -166314478 - L1MA9 LINE L1 -1 6311 6150 * 1169 205 37 16 chr5 36771050 36771372 -166314160 - L1 LINE L1 -1441 4705 4377 1877 174 126 5 chr5 36771374 36771754 -166313778 - MSTA LTR MaLR -2 426 1 8189 200 42 2 chr5 36771762 36773349 -166312183 - MSTA-int LTR MaLR -1 1650 1 1405 146 91 8 chr5 36773349 36773603 -166311929 - MSTA LTR MaLR 0 428 154 1803 170 159 5 chr5 36773603 36773974 -166311558 - MSTA LTR MaLR 0 428 1 957 286 8 0 chr5 36775526 36775774 -166309758 + HERV16 LTR ERVL 1058 1307 -3689 1618 174 19 0 chr5 36775900 36776165 -166309367 + MSTA LTR MaLR 159 428 0 1819 336 47 24 chr5 36776454 36776821 -166308711 + HERV16 LTR ERVL 1665 2022 -2974 2146 188 39 12 chr5 36776821 36777236 -166308296 + MSTB LTR MaLR 1 426 0 1819 336 47 24 chr5 36777236 36777729 -166307803 + HERV16 LTR ERVL 2022 2544 -2452 264 119 51 0 chr5 36777810 36777869 -166307663 + (TA)n Simple_repeat Simple_repeat 2 63 0 414 254 9 26 chr5 36777869 36777983 -166307549 + HERV16 LTR ERVL 2607 2718 -2278 969 236 20 18 chr5 36778131 36778398 -166307134 - MER74C LTR ERVL -196 362 15 757 329 105 51 chr5 36778462 36779309 -166306223 + HERV16 LTR ERVL 3829 4721 -933 263 333 59 52 chr5 36779556 36779962 -166305570 + HERV16 LTR ERVL 4969 5377 -387 469 361 57 25 chr5 36780081 36780519 -166305013 + LTR16B LTR ERVL 1 452 -12 210 346 38 30 chr5 36782464 36782597 -166302935 - L2 LINE L2 -24 3289 3156 25 0 0 0 chr5 36783975 36784000 -166301532 + AT_rich Low_complexity Low_complexity 1 25 0 317 62 21 0 chr5 36784066 36784114 -166301418 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 1014 201 12 136 chr5 36784341 36784679 -166300853 + MLT1B LTR MaLR 91 386 -4 406 295 43 56 chr5 36785629 36785863 -166299669 + HAL1 LINE L1 817 1047 -1460 385 270 96 108 chr5 36786069 36786413 -166299119 - L2 LINE L2 -1 3312 2973 440 330 53 23 chr5 36786434 36786698 -166298834 + HAL1 LINE L1 1265 1536 -971 1402 207 21 18 chr5 36786807 36787092 -166298440 - AluJo SINE Alu -26 286 1 540 270 124 22 chr5 36787277 36787455 -166298077 + MIR SINE MIR 30 225 -37 328 308 8 8 chr5 36787484 36787604 -166297928 + CT-rich Low_complexity Low_complexity 5 124 0 237 197 16 16 chr5 36788109 36788170 -166297362 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 22 35 0 0 chr5 36788813 36788842 -166296690 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 36789312 36789334 -166296198 + AT_rich Low_complexity Low_complexity 1 22 0 457 323 45 0 chr5 36789739 36789872 -166295660 + MER5B DNA MER1_type 40 178 0 250 288 15 0 chr5 36790196 36790262 -166295270 + MER5B DNA MER1_type 2 68 -110 332 303 46 72 chr5 36790527 36790722 -166294810 - HAL1b LINE L1 -876 472 283 1665 178 4 4 chr5 36790745 36791020 -166294512 - AluJo SINE Alu -37 275 1 318 299 56 53 chr5 36791164 36791448 -166294084 - L1M4c LINE L1 -5172 1212 928 1353 211 131 21 chr5 36791782 36792203 -166293329 - MLT1C LTR MaLR 0 467 1 27 0 0 0 chr5 36792263 36792290 -166293242 + AT_rich Low_complexity Low_complexity 1 27 0 1172 333 76 23 chr5 36792292 36792417 -166293115 - L2 LINE L2 -81 3232 3115 216 67 0 0 chr5 36792417 36792447 -166293085 + (TA)n Simple_repeat Simple_repeat 2 31 0 1172 333 76 23 chr5 36792447 36793200 -166292332 - L2 LINE L2 -198 3115 2311 194 316 145 0 chr5 36793313 36793389 -166292143 - MER5A DNA MER1_type 0 189 103 329 93 0 0 chr5 36793894 36793937 -166291595 - THE1C LTR MaLR -1 374 332 10032 117 5 3 chr5 36794060 36795489 -166290043 - THE1B-int LTR MaLR -147 1433 3 2102 118 30 33 chr5 36795491 36795856 -166289676 - THE1B LTR MaLR 0 364 1 239 299 84 9 chr5 36797677 36797784 -166287748 + MIR SINE MIR 111 225 -37 259 296 118 61 chr5 36797936 36798216 -166287316 - MLT1K LTR MaLR -121 467 172 216 111 0 0 chr5 36798340 36798376 -166287156 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 29 0 0 0 chr5 36799342 36799371 -166286161 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 36799879 36799907 -166285625 + AT_rich Low_complexity Low_complexity 1 28 0 208 0 0 0 chr5 36800156 36800179 -166285353 + (TTTTA)n Simple_repeat Simple_repeat 2 130 0 1862 161 0 0 chr5 36800179 36800452 -166285080 - AluJb SINE Alu -1 307 13 286 167 0 19 chr5 36800489 36800543 -166284989 + MIR SINE MIR 172 224 -38 1793 137 48 3 chr5 36800824 36801116 -166284416 + AluSx SINE Alu 1 305 -7 1154 271 84 25 chr5 36801616 36802022 -166283510 - LTR40b LTR ERVL 0 462 33 357 298 68 0 chr5 36802237 36802398 -166283134 + HAL1 LINE L1 2240 2411 -96 247 305 0 11 chr5 36802454 36802549 -166282983 + (TATATG)n Simple_repeat Simple_repeat 6 99 0 638 234 115 8 chr5 36805135 36805387 -166280145 - MER33 DNA MER1_type -17 307 29 5620 23 3 0 chr5 36805387 36806046 -166279486 + L1PA4 LINE L1 5495 6155 0 21 0 0 0 chr5 36806306 36806327 -166279205 + AT_rich Low_complexity Low_complexity 1 21 0 315 293 163 59 chr5 36806670 36806909 -166278623 + L2 LINE L2 2234 2497 -817 1834 166 125 13 chr5 36807349 36807734 -166277798 - MSTA LTR MaLR 0 428 1 7581 223 62 10 chr5 36807734 36809234 -166276298 - MSTA-int LTR MaLR 0 1580 3 1784 161 130 18 chr5 36809236 36809621 -166275911 - MSTA LTR MaLR 0 428 1 252 276 97 21 chr5 36810229 36810374 -166275158 - MER67D LTR ERV1 0 514 359 1018 242 58 8 chr5 36810397 36810657 -166274875 - MER67C LTR ERV1 -325 385 113 428 228 72 84 chr5 36810659 36810922 -166274610 + MER4C LTR ERV1 1 260 -205 1197 232 101 41 chr5 36810954 36811563 -166273969 - LTR48B LTR ERV1 0 707 2 945 218 61 75 chr5 36811804 36812084 -166273448 + AluJo SINE Alu 5 280 -32 252 0 0 0 chr5 36812087 36812115 -166273417 + (CA)n Simple_repeat Simple_repeat 1 28 0 263 368 111 14 chr5 36812222 36812366 -166273166 + L2 LINE L2 3114 3271 -1 231 61 0 0 chr5 36812722 36812755 -166272777 + (GA)n Simple_repeat Simple_repeat 2 34 0 1879 119 7 53 chr5 36812765 36813067 -166272465 - AluSx SINE Alu -24 288 1 244 364 37 21 chr5 36813259 36813446 -166272086 - L2 LINE L2 -823 2491 2302 25 0 0 0 chr5 36814167 36814192 -166271340 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 36814897 36814919 -166270613 + AT_rich Low_complexity Low_complexity 1 22 0 1639 179 7 0 chr5 36815025 36815299 -166270233 + AluSx SINE Alu 7 282 -30 755 250 11 17 chr5 36816736 36816912 -166268620 + Charlie1a DNA MER1_type 3 177 -1278 2106 252 42 20 chr5 36817324 36817964 -166267568 + Charlie1a DNA MER1_type 373 1026 -429 239 316 221 9 chr5 36818267 36818333 -166267199 - L2 LINE L2 -171 3142 3091 1470 77 10 0 chr5 36818333 36818529 -166267003 - AluSp SINE Alu -1 312 115 239 316 221 9 chr5 36818529 36818752 -166266780 - L2 LINE L2 -222 3091 2793 1526 214 138 22 chr5 36818777 36819146 -166266386 + MSTB LTR MaLR 1 412 -14 181 370 160 20 chr5 36819173 36819373 -166266159 + MIR SINE MIR 14 241 -21 435 336 51 23 chr5 36819466 36819683 -166265849 - L2 LINE L2 -570 2744 2522 438 258 159 7 chr5 36820129 36820280 -166265252 - MER5A DNA MER1_type -5 184 11 1734 129 59 18 chr5 36821211 36821497 -166264035 + AluSx SINE Alu 1 298 -14 1315 88 0 0 chr5 36821640 36821811 -166263721 - AluY SINE Alu -11 300 130 18886 170 44 18 chr5 36822104 36824619 -166260913 - L1MA3 LINE L1 0 7724 5276 1936 151 23 47 chr5 36824619 36825003 -166260529 + THE1C LTR MaLR 1 375 0 18886 170 44 18 chr5 36825003 36825098 -166260434 - L1MA3 LINE L1 -2448 5276 5185 270 0 0 0 chr5 36825098 36825128 -166260404 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 18886 170 44 18 chr5 36825128 36829941 -166255591 - L1MA3 LINE L1 -2539 5185 91 300 27 0 0 chr5 36829941 36829978 -166255554 + (TG)n Simple_repeat Simple_repeat 2 38 0 18886 170 44 18 chr5 36829978 36830055 -166255477 - L1MA3 LINE L1 -7633 91 17 214 245 0 0 chr5 36830184 36830233 -166255299 + (CACCAT)n Simple_repeat Simple_repeat 5 53 0 5577 258 65 44 chr5 36831002 36833954 -166251578 + L1MD2 LINE L1 2608 5637 -722 1908 203 29 37 chr5 36833954 36834442 -166251090 - MER66B LTR ERV1 -2 484 1 5577 258 65 44 chr5 36834442 36835163 -166250369 + L1MD2 LINE L1 5637 6341 -18 21 0 0 0 chr5 36835226 36835247 -166250285 + AT_rich Low_complexity Low_complexity 1 21 0 2143 120 0 10 chr5 36835259 36835567 -166249965 + AluSx SINE Alu 1 305 -7 269 250 15 0 chr5 36837610 36837678 -166247854 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 0 0 0 chr5 36837793 36837816 -166247716 + AT_rich Low_complexity Low_complexity 1 23 0 256 323 68 12 chr5 36837869 36838030 -166247502 + L1MEc LINE L1 39 208 -6188 264 208 26 52 chr5 36838078 36838155 -166247377 + MER63 DNA MER1_type 660 734 -326 400 320 102 54 chr5 36838236 36839231 -166246301 + L1MEc LINE L1 186 1227 -5169 579 207 56 22 chr5 36839772 36839951 -166245581 + MER53 DNA DNA 2 186 -3 1756 146 0 41 chr5 36840506 36840835 -166244697 + AluSx SINE Alu 1 317 0 26 0 0 0 chr5 36841127 36841153 -166244379 + AT_rich Low_complexity Low_complexity 1 26 0 1210 113 0 0 chr5 36841454 36841614 -166243918 + AluSg/x SINE Alu 132 291 -19 2010 137 15 66 chr5 36841786 36842181 -166243351 + THE1C LTR MaLR 1 375 0 4090 115 2 5 chr5 36842183 36842749 -166242783 + THE1C-int LTR MaLR 1017 1580 0 2282 128 16 19 chr5 36842749 36843125 -166242407 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 36843851 36843874 -166241658 + AT_rich Low_complexity Low_complexity 1 23 0 380 286 167 9 chr5 36845737 36846163 -166239369 - L1M4 LINE L1 -1372 4774 4282 267 133 0 0 chr5 36846312 36846357 -166239175 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 32 26 0 0 chr5 36846381 36846420 -166239112 + AT_rich Low_complexity Low_complexity 1 39 0 324 316 36 12 chr5 36846646 36846814 -166238718 - L1M4 LINE L1 -2336 3810 3639 282 29 0 0 chr5 36846869 36846904 -166238628 + (T)n Simple_repeat Simple_repeat 1 35 0 358 316 36 27 chr5 36847795 36848124 -166237408 - L1MEc LINE L1 -5019 1377 1046 901 129 0 0 chr5 36848195 36848327 -166237205 - MER41A LTR ERV1 -422 132 1 738 131 54 0 chr5 36849896 36850026 -166235506 + MER41A LTR ERV1 417 553 -1 1390 65 0 0 chr5 36850590 36850759 -166234773 + AluY SINE Alu 133 301 -10 35 0 0 0 chr5 36851251 36851286 -166234246 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 36851494 36851522 -166234010 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 36852285 36852320 -166233212 + AT_rich Low_complexity Low_complexity 1 35 0 2347 78 0 7 chr5 36852363 36852670 -166232862 - AluY SINE Alu -6 305 1 21 0 0 0 chr5 36853010 36853031 -166232501 + AT_rich Low_complexity Low_complexity 1 21 0 527 213 149 27 chr5 36853535 36853723 -166231809 + L1ME3A LINE L1 5889 6099 -71 23 33 0 0 chr5 36853757 36853787 -166231745 + AT_rich Low_complexity Low_complexity 1 30 0 343 310 75 57 chr5 36853791 36854123 -166231409 + L1M4 LINE L1 5054 5391 -755 880 265 49 12 chr5 36854368 36854613 -166230919 - MLT1E3 LTR MaLR -370 254 1 1222 205 46 49 chr5 36854859 36855229 -166230303 + MLT1A2 LTR MaLR 4 372 -2 2388 69 0 0 chr5 36857545 36857836 -166227696 - AluSg SINE Alu -9 301 11 2182 72 0 31 chr5 36858010 36858300 -166227232 - AluY SINE Alu -6 305 25 1907 131 109 3 chr5 36858439 36858768 -166226764 - THE1B LTR MaLR 0 364 1 6095 104 37 10 chr5 36858789 36859718 -166225814 - LTR13 LTR ERVK 0 954 1 198 143 0 0 chr5 36859798 36859833 -166225699 + (TG)n Simple_repeat Simple_repeat 2 36 0 958 180 77 109 chr5 36861227 36861604 -166223928 - MLT1A1 LTR MaLR 0 365 1 2224 93 10 0 chr5 36861889 36862191 -166223341 + AluSq SINE Alu 1 305 -8 292 318 65 56 chr5 36863130 36863344 -166222188 - MIR SINE MIR -21 241 26 21 57 0 0 chr5 36864212 36864247 -166221285 + AT_rich Low_complexity Low_complexity 1 35 0 270 0 0 0 chr5 36864800 36864830 -166220702 + (T)n Simple_repeat Simple_repeat 1 30 0 1336 160 4 4 chr5 36864836 36865067 -166220465 - AluSx SINE Alu -81 231 1 42 65 0 0 chr5 36865367 36865444 -166220088 + AT_rich Low_complexity Low_complexity 1 77 0 298 239 124 73 chr5 36865467 36865657 -166219875 - HAL1 LINE L1 -4 2503 2324 2150 129 3 3 chr5 36865657 36865968 -166219564 - AluSx SINE Alu 0 312 2 298 239 124 73 chr5 36865968 36866229 -166219303 - HAL1 LINE L1 -183 2324 2029 722 285 97 24 chr5 36866505 36866971 -166218561 - HAL1 LINE L1 -895 1612 1113 291 71 0 0 chr5 36867258 36867300 -166218232 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 304 7 36 chr5 36867788 36867926 -166217606 - LTR33 LTR ERVL 0 521 388 505 148 25 0 chr5 36867935 36868016 -166217516 - MSTA LTR MaLR 0 428 346 6139 73 28 0 chr5 36868162 36868985 -166216547 - L1PA7 LINE L1 -5 6149 5304 6351 83 3 2 chr5 36868987 36869886 -166215646 + L1PA7 LINE L1 4382 5281 -865 1793 168 48 0 chr5 36870367 36870700 -166214832 - MSTA LTR MaLR -79 349 1 880 271 187 7 chr5 36871144 36871657 -166213875 + MLT1E1 LTR MaLR 1 654 0 390 127 0 42 chr5 36871657 36871728 -166213804 + L1PA15 LINE L1 4690 4757 -1389 5624 128 11 4 chr5 36871728 36872854 -166212678 + L1PA15 LINE L1 5032 6164 -1 4972 142 54 5 chr5 36873072 36873960 -166211572 - L1MA6 LINE L1 0 6300 5369 518 204 0 0 chr5 36873955 36874058 -166211474 - L1MA6 LINE L1 -1069 5077 4975 * 195 42 0 0 chr5 36874978 36875002 -166210530 + (TC)n Simple_repeat Simple_repeat 2 25 0 609 299 102 31 chr5 36875020 36875562 -166209970 - L1MC4 LINE L1 -166 7876 7297 479 168 148 0 chr5 36875571 36875672 -166209860 + L1PA16 LINE L1 6049 6164 -2 364 156 15 96 chr5 36875975 36876110 -166209422 + L1M4 LINE L1 3834 3957 -2189 322 277 58 7 chr5 36877166 36877303 -166208229 - L1ME3 LINE L1 -1 6161 6018 427 317 89 47 chr5 36877328 36878303 -166207229 - L1M4 LINE L1 -1834 4312 3297 31 0 0 0 chr5 36878922 36878953 -166206579 + AT_rich Low_complexity Low_complexity 1 31 0 757 188 7 7 chr5 36880474 36880618 -166204914 - Tigger1 DNA MER2_type 0 2418 2275 12259 149 44 30 chr5 36881142 36882392 -166203140 - Tigger1 DNA MER2_type -139 2279 983 2158 133 16 34 chr5 36882392 36882774 -166202758 + THE1C LTR MaLR 1 375 0 12259 149 44 30 chr5 36882774 36883771 -166201761 - Tigger1 DNA MER2_type -1435 983 1 2378 182 25 6 chr5 36885233 36885721 -166199811 - L1MB3 LINE L1 -2 6181 5685 1466 253 184 8 chr5 36886796 36887318 -166198214 - MER90 LTR ERV1 0 614 1 2252 80 0 3 chr5 36888007 36888309 -166197223 - L1PA13 LINE L1 -4 6159 5859 716 256 0 0 chr5 36888707 36888863 -166196669 + MER6B DNA MER2_type 1 156 -54 364 348 118 25 chr5 36889627 36889788 -166195744 + L2 LINE L2 223 398 -2916 452 296 135 32 chr5 36890170 36890643 -166194889 + L1M4 LINE L1 4166 4687 -1459 33 43 0 0 chr5 36890673 36890720 -166194812 + AT_rich Low_complexity Low_complexity 1 47 0 388 358 5 27 chr5 36890948 36891135 -166194397 - MIR SINE MIR -50 212 30 288 0 0 0 chr5 36891254 36891286 -166194246 + (CA)n Simple_repeat Simple_repeat 2 33 0 206 324 57 75 chr5 36891340 36891658 -166193874 - L2 LINE L2 -1008 2306 1995 899 255 37 69 chr5 36891678 36892055 -166193477 + MLT1A1 LTR MaLR 1 365 0 2361 83 0 13 chr5 36892067 36892379 -166193153 - AluY SINE Alu -3 308 1 676 211 57 14 chr5 36892470 36892676 -166192856 - L1PA16 LINE L1 -1 6162 5928 2382 185 7 16 chr5 36893077 36893509 -166192023 - MER44D DNA MER2_type 0 605 123 5787 74 2 26 chr5 36893864 36894663 -166190869 - LTR17 LTR ERV1 0 780 1 225 365 47 0 chr5 36895697 36895782 -166189750 - L2 LINE L2 -9 3263 3175 2523 200 73 38 chr5 36896024 36896075 -166189457 + MER67C LTR ERV1 9 57 -653 1673 147 3 69 chr5 36896075 36896171 -166189361 + AluSx SINE Alu 1 102 -210 1957 119 46 13 chr5 36896171 36896474 -166189058 + AluSp SINE Alu 1 313 0 1673 147 3 69 chr5 36896474 36896711 -166188821 + AluSx SINE Alu 102 312 0 2523 200 73 38 chr5 36896711 36897289 -166188243 + MER67C LTR ERV1 57 660 -50 2050 138 6 6 chr5 36897362 36897674 -166187858 - AluSx SINE Alu 0 312 1 2266 87 0 7 chr5 36898355 36898653 -166186879 - AluSc SINE Alu -13 296 1 250 292 34 34 chr5 36898760 36898849 -166186683 + L2 LINE L2 2211 2299 -1015 1780 168 0 30 chr5 36900029 36900327 -166185205 - AluJo SINE Alu -23 289 1 250 238 20 48 chr5 36900343 36900490 -166185042 + (CATATA)n Simple_repeat Simple_repeat 4 146 0 440 309 52 60 chr5 36901068 36901434 -166184098 - L2 LINE L2 0 3313 2951 2942 151 32 2 chr5 36902486 36902988 -166182544 - Tigger3(Golem) DNA MER2_type 0 3029 2513 26 0 0 0 chr5 36902995 36903021 -166182511 + AT_rich Low_complexity Low_complexity 1 26 0 * 462 208 208 0 chr5 36903015 36903140 -166182392 - L1MA5A LINE L1 -20 6277 6127 774 299 0 0 chr5 36903157 36903358 -166182174 - HERV17 LTR ERV1 -1067 7559 7359 10916 233 18 21 chr5 36903366 36905723 -166179809 - HERV17 LTR ERV1 -4897 3729 789 1531 111 5 0 chr5 36905723 36905930 -166179602 - AluY SINE Alu -19 292 85 10916 233 18 21 chr5 36905930 36906717 -166178815 - HERV17 LTR ERV1 -7837 789 1 711 206 9 93 chr5 36906742 36906999 -166178533 - LTR12 LTR ERV1 -98 682 238 39615 83 9 0 chr5 36907269 36912423 -166173109 + HERVL LTR ERVL 2 5198 -456 23 78 0 0 chr5 36912467 36912518 -166173014 + AT_rich Low_complexity Low_complexity 1 51 0 4405 164 40 4 chr5 36914625 36915422 -166170110 - LTR1B LTR ERV1 0 826 1 23 33 0 0 chr5 36916821 36916851 -166168681 + AT_rich Low_complexity Low_complexity 1 30 0 342 312 26 7 chr5 36917061 36917215 -166168317 + (TATATG)n Simple_repeat Simple_repeat 4 160 0 281 199 29 29 chr5 36917221 36917357 -166168175 + (CATATA)n Simple_repeat Simple_repeat 5 140 0 24 67 0 0 chr5 36917954 36917999 -166167533 + AT_rich Low_complexity Low_complexity 1 45 0 2203 131 33 28 chr5 36918098 36918488 -166167044 - Tigger2 DNA MER2_type -48 2670 2279 297 237 0 0 chr5 36918494 36918553 -166166979 + MER8 DNA MER2_type 181 239 0 22 70 0 0 chr5 36918999 36919042 -166166490 + AT_rich Low_complexity Low_complexity 1 43 0 1824 184 46 57 chr5 36919296 36919571 -166165961 + Tigger2a DNA MER2_type 1 271 -2437 459 0 0 0 chr5 36919571 36919622 -166165910 + (TA)n Simple_repeat Simple_repeat 2 52 0 1824 184 46 57 chr5 36919622 36919785 -166165747 + Tigger2a DNA MER2_type 271 434 0 267 173 0 0 chr5 36919914 36919966 -166165566 + (TG)n Simple_repeat Simple_repeat 1 52 0 1826 161 5 63 chr5 36920814 36921212 -166164320 + THE1C LTR MaLR 1 375 0 370 273 105 0 chr5 36921673 36921816 -166163716 - MIR SINE MIR -8 254 97 * 1001 304 105 76 chr5 36921813 36922735 -166162797 + L2 LINE L2 1820 2768 -546 21 36 0 0 chr5 36922789 36922817 -166162715 + AT_rich Low_complexity Low_complexity 1 28 0 381 134 60 0 chr5 36923137 36923286 -166162246 + (TA)n Simple_repeat Simple_repeat 2 159 0 211 176 69 0 chr5 36923300 36923459 -166162073 + (TA)n Simple_repeat Simple_repeat 2 171 0 26 0 0 0 chr5 36923468 36923494 -166162038 + AT_rich Low_complexity Low_complexity 1 26 0 311 119 71 12 chr5 36923494 36923662 -166161870 + (TA)n Simple_repeat Simple_repeat 2 179 0 260 296 148 0 chr5 36924164 36924272 -166161260 + MIR SINE MIR 89 212 -50 2848 16 0 0 chr5 36925637 36925955 -166159577 + AluYb8 SINE Alu 1 318 0 268 347 142 40 chr5 36926636 36927262 -166158270 - L2 LINE L2 -851 2463 1774 1757 167 0 34 chr5 36927263 36927586 -166157946 + AluJo SINE Alu 1 312 0 442 300 136 54 chr5 36928382 36928809 -166156723 - HAL1 LINE L1 -413 2094 1633 459 0 0 0 chr5 36928878 36928929 -166156603 + (TG)n Simple_repeat Simple_repeat 1 51 0 562 282 101 32 chr5 36928929 36929206 -166156326 - L1M4 LINE L1 -1289 4857 4562 290 274 54 65 chr5 36929261 36929429 -166156103 + MLT1E2-int LTR MaLR 1023 1188 -183 22 56 0 0 chr5 36929841 36929877 -166155655 + AT_rich Low_complexity Low_complexity 1 36 0 2426 159 31 5 chr5 36929918 36930339 -166155193 - MSTB1 LTR MaLR 0 432 1 226 329 29 0 chr5 36931937 36932007 -166153525 + L2 LINE L2 3194 3265 -7 183 289 0 0 chr5 36932033 36932085 -166153447 - MIR SINE MIR -126 136 85 844 259 200 77 chr5 36932666 36933222 -166152310 + MLT1E2 LTR MaLR 1 624 0 22 56 0 0 chr5 36933720 36933756 -166151776 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 36934951 36934980 -166150552 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 36935476 36935511 -166150021 + AT_rich Low_complexity Low_complexity 1 35 0 184 383 93 19 chr5 36935512 36935726 -166149806 + L2 LINE L2 2375 2604 -710 1330 210 31 11 chr5 36935838 36936124 -166149408 + AluJo SINE Alu 9 300 -12 1730 235 3 6 chr5 36936207 36936573 -166148959 - MLT1A1 LTR MaLR 0 365 1 1633 195 3 3 chr5 36937215 36937507 -166148025 - AluJb SINE Alu -20 292 1 33 25 0 0 chr5 36938365 36938405 -166147127 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 36938625 36938646 -166146886 + AT_rich Low_complexity Low_complexity 1 21 0 311 371 35 0 chr5 36939425 36939595 -166145937 - MIR SINE MIR -38 224 49 22 56 0 0 chr5 36939741 36939777 -166145755 + AT_rich Low_complexity Low_complexity 1 36 0 1298 198 16 95 chr5 36940047 36940477 -166145055 - MSTD LTR MaLR 0 396 1 30 59 0 0 chr5 36941049 36941100 -166144432 + AT_rich Low_complexity Low_complexity 1 51 0 391 314 61 53 chr5 36941224 36941390 -166144142 - L1 LINE L1 -1602 4544 4381 2001 145 7 0 chr5 36941390 36941694 -166143838 - AluSx SINE Alu -6 306 1 391 314 61 53 chr5 36941694 36941960 -166143572 - L1 LINE L1 -1765 4381 4111 2568 128 11 30 chr5 36943077 36943513 -166142019 - LTR22A LTR ERVK -30 428 1 8650 109 2 1 chr5 36943513 36945845 -166139687 - HERVK22 LTR ERVK 0 6837 2248 4869 157 1 7 chr5 36945837 36946608 -166138924 - HERVK22 LTR ERVK -5856 981 215 * 750 70 0 0 chr5 36946611 36946711 -166138821 - AluY SINE Alu -211 100 1 211 167 0 33 chr5 36947115 36947175 -166138357 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 238 339 32 38 chr5 36947175 36947488 -166138044 + HAL1 LINE L1 1341 1651 -856 203 204 19 0 chr5 36948032 36948086 -166137446 + (TA)n Simple_repeat Simple_repeat 1 55 0 286 145 14 14 chr5 36948108 36948177 -166137355 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr5 36948665 36948686 -166136846 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 36949451 36949489 -166136043 + AT_rich Low_complexity Low_complexity 1 38 0 274 57 0 0 chr5 36950137 36950172 -166135360 + MLT1C LTR MaLR 23 57 -410 210 302 216 22 chr5 36950317 36950539 -166134993 + L3 LINE CR1 946 1210 -367 1112 171 39 73 chr5 36952700 36952934 -166132598 - AluJo SINE Alu -66 246 21 2101 134 14 38 chr5 36952934 36953299 -166132233 + LTR18A LTR ERVL 2 357 0 2017 185 36 32 chr5 36953335 36953773 -166131759 + HERVL18 LTR ERVL 95 534 -5513 * 2064 193 12 13 chr5 36953742 36954341 -166131191 + HERVL18 LTR ERVL 1149 1810 -4237 1261 153 65 2 chr5 36954340 36954598 -166130934 + HERVL18 LTR ERVL 2119 2450 -3597 * 2080 203 3 3 chr5 36954599 36954968 -166130564 + HERVL18 LTR ERVL 2720 3088 -2959 1283 153 0 0 chr5 36954964 36955147 -166130385 + HERVL18 LTR ERVL 2952 3134 -2913 * 201 236 0 18 chr5 36955503 36955558 -166129974 + GA-rich Low_complexity Low_complexity 1 54 0 * 209 167 42 21 chr5 36955521 36955569 -166129963 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 1210 243 48 88 chr5 36955695 36956221 -166129311 - MLT1D LTR MaLR 0 505 1 1899 269 38 28 chr5 36956577 36957316 -166128216 - L1MEc LINE L1 -2109 4106 3361 809 306 37 16 chr5 36957329 36957763 -166127769 - L1MEc LINE L1 -3459 2756 2314 797 238 32 61 chr5 36957859 36958289 -166127243 - LTR40b LTR ERVL -40 422 32 2139 293 61 36 chr5 36958304 36958619 -166126913 - L1MEc LINE L1 -4056 2340 2034 3757 111 88 2 chr5 36958619 36959212 -166126320 - LTR9B LTR ERV1 0 644 1 2139 293 61 36 chr5 36959212 36960416 -166125116 - L1MEc LINE L1 -4362 2034 783 2428 133 79 11 chr5 36960436 36960734 -166124798 + LTR21A LTR ERV1 1 340 -165 5881 58 13 14 chr5 36960734 36961515 -166124017 + LTR17 LTR ERV1 1 780 0 2428 133 79 11 chr5 36961515 36961659 -166123873 + LTR21A LTR ERV1 340 473 -32 270 116 0 0 chr5 36961659 36961702 -166123830 + (TC)n Simple_repeat Simple_repeat 2 44 0 749 306 11 22 chr5 36961718 36961993 -166123539 - L1MEc LINE L1 -5640 756 485 600 150 0 10 chr5 36961997 36962097 -166123435 + MER4A LTR ERV1 1 99 -565 1677 130 160 88 chr5 36962097 36962473 -166123059 + MER4A LTR ERV1 262 664 0 988 301 54 20 chr5 36962473 36962878 -166122654 - L1MEc LINE L1 -5913 483 65 37 99 0 0 chr5 36963469 36963590 -166121942 + AT_rich Low_complexity Low_complexity 1 121 0 22 0 0 0 chr5 36963929 36963951 -166121581 + AT_rich Low_complexity Low_complexity 1 22 0 425 314 6 6 chr5 36964183 36964352 -166121180 + GA-rich Low_complexity Low_complexity 3 171 0 24 32 0 0 chr5 36965439 36965470 -166120062 + AT_rich Low_complexity Low_complexity 1 31 0 516 16 0 0 chr5 36965532 36965593 -166119939 + (CA)n Simple_repeat Simple_repeat 2 62 0 196 369 41 33 chr5 36965596 36965718 -166119814 + MIR SINE MIR 20 142 -120 345 327 92 24 chr5 36966522 36966858 -166118674 - L1M4 LINE L1 -770 5376 5018 1884 164 16 0 chr5 36967819 36968124 -166117408 - AluSx SINE Alu -2 310 1 3396 149 27 2 chr5 36968295 36968879 -166116653 + LTR43 LTR ERV1 1 599 -3 273 268 31 21 chr5 36970180 36970277 -166115255 - MLT1L LTR MaLR -5 610 513 399 309 76 50 chr5 36970417 36970718 -166114814 - MLT1L LTR MaLR -295 320 12 21 0 0 0 chr5 36970976 36970997 -166114535 + AT_rich Low_complexity Low_complexity 1 21 0 2279 95 14 0 chr5 36971678 36971974 -166113558 - AluSp SINE Alu -13 300 1 22 35 0 0 chr5 36972907 36972936 -166112596 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 36973115 36973143 -166112389 + AT_rich Low_complexity Low_complexity 1 28 0 43 0 0 0 chr5 36973237 36973280 -166112252 + AT_rich Low_complexity Low_complexity 1 43 0 346 234 112 46 chr5 36973742 36973939 -166111593 - L1ME LINE L1 -385 5736 5527 307 258 39 55 chr5 36974486 36974614 -166110918 - MLT1L LTR MaLR -326 289 164 2277 146 5 19 chr5 36974787 36975156 -166110376 - THE1B LTR MaLR 0 364 1 10915 97 2 66 chr5 36975156 36976844 -166108688 - THE1B-int LTR MaLR 0 1580 1 2067 169 8 19 chr5 36976844 36977210 -166108322 - THE1B LTR MaLR 0 364 3 848 280 46 61 chr5 36977212 36977755 -166107777 - L1ME LINE L1 -1998 4148 3614 240 277 12 60 chr5 36978177 36978260 -166107272 - MIR SINE MIR -116 146 68 265 97 0 139 chr5 36979176 36979248 -166106284 - L1MC3 LINE L1 -8 7777 7716 2037 162 64 20 chr5 36980052 36980459 -166105073 - MSTB LTR MaLR -1 425 1 32 26 0 0 chr5 36980579 36980618 -166104914 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 36981995 36982020 -166103512 + AT_rich Low_complexity Low_complexity 1 25 0 2479 80 0 0 chr5 36983817 36984128 -166101404 - AluY SINE Alu 0 311 1 1393 260 87 31 chr5 36984459 36984539 -166100993 + L1MC4 LINE L1 5291 5365 -2677 1684 184 0 0 chr5 36984539 36984832 -166100700 + AluJb SINE Alu 7 299 -13 1393 260 87 31 chr5 36984832 36985443 -166100089 + L1MC4 LINE L1 5365 6017 -2025 280 221 47 47 chr5 36985474 36985560 -166099972 + MER58B DNA MER1_type 226 311 -30 1980 141 13 49 chr5 36985561 36985950 -166099582 - THE1C LTR MaLR 0 375 1 1705 190 7 0 chr5 36986034 36986344 -166099188 - AluSx SINE Alu 0 312 1 787 131 8 0 chr5 36986350 36986480 -166099052 - L1PA15 LINE L1 -3 6162 6032 897 81 0 59 chr5 36986480 36986616 -166098916 + L1P4 LINE L1 5616 5743 -422 222 304 0 13 chr5 36986709 36986788 -166098744 + CT-rich Low_complexity Low_complexity 1 78 0 206 273 39 0 chr5 36986748 36986825 -166098707 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 * 21 0 0 0 chr5 36986986 36987007 -166098525 + AT_rich Low_complexity Low_complexity 1 21 0 270 365 18 55 chr5 36987105 36987324 -166098208 + MIR SINE MIR 20 230 -32 264 242 57 105 chr5 36988148 36988272 -166097260 - LTR67 LTR ERVL -8 549 432 245 269 39 0 chr5 36988622 36988700 -166096832 + Charlie8 DNA MER1_type 57 137 -2280 9460 111 13 2 chr5 36988866 36990205 -166095327 + THE1B-int LTR MaLR 227 1580 0 2084 150 27 35 chr5 36990205 36990572 -166094960 + THE1B LTR MaLR 1 364 0 272 167 14 0 chr5 36990818 36990890 -166094642 + (TA)n Simple_repeat Simple_repeat 2 74 0 335 253 20 61 chr5 36990890 36990989 -166094543 + L1MC4 LINE L1 6613 6707 -1335 29 28 0 0 chr5 36991712 36991748 -166093784 + AT_rich Low_complexity Low_complexity 1 36 0 22 88 0 0 chr5 36991891 36991948 -166093584 + AT_rich Low_complexity Low_complexity 1 57 0 201 184 69 11 chr5 36993040 36993127 -166092405 + (TA)n Simple_repeat Simple_repeat 2 93 0 5456 158 26 23 chr5 36994406 36994740 -166090792 - L1MA5A LINE L1 -1 6296 5964 1950 141 10 0 chr5 36994740 36995030 -166090502 - AluSx SINE Alu -19 293 1 5456 158 26 23 chr5 36995030 36995793 -166089739 - L1MA5A LINE L1 -333 5964 5195 1106 239 100 48 chr5 36995806 36996245 -166089287 + MLT1C LTR MaLR 1 462 -5 403 283 72 30 chr5 36996740 36996906 -166088626 - MER93a LTR ERV1 -229 173 1 271 236 25 0 chr5 36996998 36997164 -166088368 + CT-rich Low_complexity Low_complexity 1 170 0 2096 113 3 0 chr5 36997414 36997738 -166087794 - AluSp SINE Alu 0 325 1 21 0 0 0 chr5 37000668 37000689 -166084843 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 37001871 37001906 -166083626 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 37001983 37002011 -166083521 + AT_rich Low_complexity Low_complexity 1 28 0 1576 251 57 42 chr5 37002354 37002896 -166082636 + MER44D DNA MER2_type 1 605 0 216 0 0 0 chr5 37002979 37003003 -166082529 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1370 23 0 23 chr5 37003036 37003230 -166082302 - L1PA2 LINE L1 0 6155 5988 384 280 0 0 chr5 37004593 37004686 -166080846 + U13 snRNA snRNA 12 104 0 230 216 0 0 chr5 37004752 37004803 -166080729 + L1MC4 LINE L1 6652 6702 -1340 * 287 250 57 0 chr5 37004769 37004857 -166080675 - L1MC4 LINE L1 -1340 6702 6610 1619 224 18 3 chr5 37005148 37005474 -166080058 + MLT1A1 LTR MaLR 34 364 -1 326 227 18 45 chr5 37005474 37005580 -166079952 - LTR40c LTR ERVL -211 254 152 347 138 17 0 chr5 37005713 37005771 -166079761 - LTR40a LTR ERVL -377 142 84 281 259 63 42 chr5 37006195 37006338 -166079194 - LTR33A LTR ERVL 0 523 378 368 262 170 44 chr5 37006532 37006738 -166078794 - LTR50 LTR ERVL -545 250 19 2090 124 28 31 chr5 37007343 37007699 -166077833 - THE1A LTR MaLR 0 355 1 10786 113 14 1 chr5 37007699 37009258 -166076274 - THE1A-int LTR MaLR 0 1580 1 1907 140 16 44 chr5 37009258 37009623 -166075909 - THE1A LTR MaLR 0 355 1 266 319 0 0 chr5 37010598 37010670 -166074862 + MER5A DNA MER1_type 9 80 -109 1839 194 44 47 chr5 37010826 37011299 -166074233 + MER41B LTR ERV1 131 602 -33 489 301 39 82 chr5 37011819 37012443 -166073089 + HAL1b LINE L1 13 609 -739 878 267 80 37 chr5 37012760 37013086 -166072446 + MER93a LTR ERV1 63 402 0 1203 259 7 31 chr5 37013125 37013418 -166072114 + AluJb SINE Alu 1 286 -16 368 262 68 91 chr5 37013437 37013864 -166071668 + HAL1b LINE L1 932 1348 0 28 29 0 0 chr5 37014468 37014503 -166071029 + AT_rich Low_complexity Low_complexity 1 35 0 761 114 0 0 chr5 37014649 37014763 -166070769 + AluSg/x SINE Alu 189 302 -10 25 83 0 0 chr5 37015138 37015198 -166070334 + AT_rich Low_complexity Low_complexity 1 60 0 211 214 24 0 chr5 37015331 37015373 -166070159 + CT-rich Low_complexity Low_complexity 2 44 0 29 0 0 0 chr5 37015609 37015638 -166069894 + AT_rich Low_complexity Low_complexity 1 29 0 2033 144 39 28 chr5 37015796 37016156 -166069376 + THE1B LTR MaLR 1 364 0 5684 128 171 61 chr5 37016156 37016634 -166068898 + THE1B-int LTR MaLR 1 425 -1155 2217 72 7 7 chr5 37016634 37016924 -166068608 - AluY SINE Alu -6 305 16 5684 128 171 61 chr5 37016924 37017578 -166067954 + THE1B-int LTR MaLR 425 1258 -322 1797 224 78 23 chr5 37017772 37018206 -166067326 + MER70A LTR ERVL 1 458 -14 2062 132 7 0 chr5 37018482 37018778 -166066754 + AluSx SINE Alu 1 298 -14 29 0 8 0 chr5 37019489 37019560 -166065972 + AT_rich Low_complexity Low_complexity 1 29 0 3848 246 59 77 chr5 37021259 37021499 -166064033 + L1M4 LINE L1 16 259 -6283 2168 87 0 13 chr5 37021499 37021631 -166063901 + AluY SINE Alu 1 133 -178 216 0 0 0 chr5 37021631 37021655 -166063877 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2168 87 0 13 chr5 37021655 37021822 -166063710 + AluY SINE Alu 133 296 -15 3848 246 59 77 chr5 37021822 37022641 -166062891 + L1M4 LINE L1 259 1035 -5507 458 110 0 14 chr5 37022641 37022714 -166062818 - MADE1 DNA Mariner -4 76 5 3848 246 59 77 chr5 37022714 37023342 -166062190 + L1M4 LINE L1 1035 1673 -4869 29 28 0 0 chr5 37025539 37025575 -166059957 + AT_rich Low_complexity Low_complexity 1 36 0 272 272 54 22 chr5 37025575 37025667 -166059865 + MIR SINE MIR 168 262 0 1101 225 9 0 chr5 37026282 37026504 -166059028 - AluJo SINE Alu -2 310 87 204 222 0 0 chr5 37027600 37027636 -166057896 + polypurine Low_complexity Low_complexity 5 40 0 23 0 0 0 chr5 37029234 37029257 -166056275 + AT_rich Low_complexity Low_complexity 1 23 0 617 248 0 0 chr5 37031245 37031378 -166054154 + FLAM_A SINE Alu 1 133 0 29 70 0 0 chr5 37032840 37032897 -166052635 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr5 37032940 37032962 -166052570 + AT_rich Low_complexity Low_complexity 1 22 0 2588 175 34 1 chr5 37033089 37033707 -166051825 + L1P4 LINE L1 4821 5455 -710 1168 287 65 81 chr5 37033942 37034816 -166050716 + MER89-int LTR ERV1 147 1006 -5795 2123 107 0 49 chr5 37035232 37035558 -166049974 + AluSx SINE Alu 1 310 -2 196 349 115 65 chr5 37035799 37036243 -166049289 - L2 LINE L2 -1122 2192 1727 2126 103 0 4 chr5 37036248 37036561 -166048971 + AluSc SINE Alu 1 312 0 894 232 172 22 chr5 37037002 37037452 -166048080 - L1ME2 LINE L1 -100 6064 5457 27 49 0 0 chr5 37037673 37037714 -166047818 + AT_rich Low_complexity Low_complexity 1 41 0 920 286 94 23 chr5 37037717 37038323 -166047209 - L1ME2 LINE L1 -1043 5103 4455 215 149 92 11 chr5 37038423 37038510 -166047022 + (TA)n Simple_repeat Simple_repeat 1 94 0 21 36 0 0 chr5 37039059 37039087 -166046445 + AT_rich Low_complexity Low_complexity 1 28 0 308 198 0 23 chr5 37039314 37039400 -166046132 + (TATG)n Simple_repeat Simple_repeat 4 87 0 186 191 0 0 chr5 37039418 37039460 -166046072 + (CA)n Simple_repeat Simple_repeat 1 42 0 1585 177 10 11 chr5 37039550 37040006 -166045526 + L1M2 LINE L1 5083 5536 -744 711 150 29 14 chr5 37040111 37040251 -166045281 + L1M2 LINE L1 5535 5676 -621 * 1064 136 23 0 chr5 37040246 37040423 -166045109 + L1M2 LINE L1 5553 5733 -564 27 29 0 0 chr5 37041113 37041147 -166044385 + AT_rich Low_complexity Low_complexity 1 34 0 1965 109 26 22 chr5 37041183 37041495 -166044037 - AluSp SINE Alu 0 313 1 679 290 16 57 chr5 37042307 37042552 -166042980 + MIR SINE MIR 20 254 -8 1088 296 83 8 chr5 37044049 37044411 -166041121 - MLT1H LTR MaLR -4 545 157 34 55 0 0 chr5 37044525 37044580 -166040952 + AT_rich Low_complexity Low_complexity 1 55 0 1952 114 3 3 chr5 37044602 37044900 -166040632 - L1PB1 LINE L1 -4 6147 5850 485 44 17 0 chr5 37044901 37044976 -166040556 + L1MC/D LINE L1 5371 5451 -719 1497 168 59 3 chr5 37045040 37045344 -166040188 + L1MC1 LINE L1 6011 6331 -2 1335 250 140 29 chr5 37045441 37046056 -166039476 - L1ME1 LINE L1 -229 6006 5324 683 231 87 108 chr5 37047785 37048301 -166037231 - L1ME1 LINE L1 -893 5322 4818 1570 163 71 52 chr5 37048333 37048701 -166036831 - THE1C LTR MaLR 0 375 1 8638 132 52 35 chr5 37048701 37050255 -166035277 - THE1C-int LTR MaLR 0 1580 2 1019 170 41 32 chr5 37050256 37050474 -166035058 - THE1C LTR MaLR 0 375 156 4112 131 11 0 chr5 37050476 37051116 -166034416 - L1PA8A LINE L1 -1949 4197 3551 6751 151 33 5 chr5 37051116 37053015 -166032517 + L1PA8A LINE L1 4197 6128 -3 861 138 127 14 chr5 37053017 37053189 -166032343 - THE1C LTR MaLR -164 191 1 489 263 141 5 chr5 37053189 37053402 -166032130 - L1ME1 LINE L1 -1430 4785 4544 536 288 68 0 chr5 37053422 37053599 -166031933 - L1ME1 LINE L1 -6093 303 115 428 316 84 60 chr5 37054961 37055446 -166030086 + HAL1 LINE L1 956 1452 -1055 455 313 61 49 chr5 37055749 37056001 -166029531 + MLT1G1 LTR MaLR 1 240 -309 961 169 57 0 chr5 37157640 37157817 -165927715 - MSTA LTR MaLR 0 428 242 1577 127 0 0 chr5 37158037 37158257 -165927275 + AluSx SINE Alu 35 254 -58 1388 187 20 12 chr5 37158598 37158849 -165926683 - MSTA LTR MaLR -175 253 1 6298 221 39 32 chr5 37159571 37161300 -165924232 + L1P LINE L1 2375 4114 -2032 236 98 49 0 chr5 37161403 37161444 -165924088 - Alu SINE Alu -257 45 3 2040 121 0 0 chr5 37161465 37161755 -165923777 + AluSq SINE Alu 4 293 -20 22 0 0 0 chr5 37161755 37161777 -165923755 + AT_rich Low_complexity Low_complexity 1 22 0 398 277 9 27 chr5 37163035 37163147 -165922385 - L2 LINE L2 -2 3311 3202 1312 200 22 82 chr5 37163293 37163708 -165921824 - MLT1B LTR MaLR 0 390 1 4850 151 32 62 chr5 37163850 37164669 -165920863 - L1PA15 LINE L1 -6 6159 5317 3587 60 6 0 chr5 37164669 37165136 -165920396 + L1PA7 LINE L1 5683 6152 -2 4850 151 32 62 chr5 37165136 37165489 -165920043 - L1PA15 LINE L1 -848 5317 5005 1835 83 4 29 chr5 37165489 37165766 -165919766 - L1PA13 LINE L1 -3 6160 5891 4850 151 32 62 chr5 37165766 37165866 -165919666 - L1PA15 LINE L1 -1160 5005 4904 5599 120 8 27 chr5 37166080 37167454 -165918078 + L1PA11 LINE L1 4432 5773 -401 4628 127 3 9 chr5 37167454 37168149 -165917383 + LTR8 LTR ERV1 1 691 0 5599 120 8 27 chr5 37168149 37168544 -165916988 + L1PA11 LINE L1 5773 6174 0 2720 3 0 3 chr5 37168686 37168987 -165916545 - AluYa5 SINE Alu -11 300 1 1576 136 18 4 chr5 37169024 37169304 -165916228 + L1MA4 LINE L1 6013 6296 -4 372 270 42 42 chr5 37170003 37170192 -165915340 + MER112 DNA MER1_type 67 255 -5 25 51 0 0 chr5 37170392 37170431 -165915101 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 37170696 37170721 -165914811 + AT_rich Low_complexity Low_complexity 1 25 0 1198 231 45 34 chr5 37171660 37172008 -165913524 - MLT1A1 LTR MaLR 0 467 11 266 0 29 0 chr5 37172684 37172718 -165912814 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1725 182 13 50 chr5 37173547 37173926 -165911606 + MLT1A1 LTR MaLR 1 365 0 1650 74 35 0 chr5 37174147 37174377 -165911155 - MER75B DNA T2_type -5 238 1 801 336 30 57 chr5 37174986 37175423 -165910109 + MLT1E LTR MaLR 22 446 -147 2727 148 97 28 chr5 37175444 37175983 -165909549 - L1PB4 LINE L1 0 6156 5581 2162 206 51 11 chr5 37175978 37176440 -165909092 + L1 LINE L1 4281 4770 -1376 * 207 88 0 0 chr5 37176440 37176474 -165909058 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2162 206 51 11 chr5 37176474 37176559 -165908973 + L1 LINE L1 4770 4850 -1296 379 273 49 14 chr5 37176605 37176748 -165908784 + MLT1E LTR MaLR 446 593 0 426 56 0 0 chr5 37178852 37178906 -165906626 - THE1C LTR MaLR -321 54 1 2262 90 10 0 chr5 37179433 37179723 -165905809 - AluSg SINE Alu -17 293 1 256 277 10 10 chr5 37180422 37180523 -165905009 + (TG)n Simple_repeat Simple_repeat 2 102 0 1041 64 57 0 chr5 37180813 37180953 -165904579 + AluY SINE Alu 158 305 -6 294 353 43 7 chr5 37180954 37181093 -165904439 + MIR SINE MIR 6 149 -113 1647 132 24 28 chr5 37181096 37181384 -165904148 - MER44D DNA MER2_type 0 609 53 1128 128 12 0 chr5 37181384 37181556 -165903976 + AluSg/x SINE Alu 127 300 -12 27 49 0 0 chr5 37182192 37182233 -165903299 + AT_rich Low_complexity Low_complexity 1 41 0 3990 182 11 4 chr5 37182572 37183277 -165902255 + MER50 LTR ERV1 1 710 -24 667 250 28 11 chr5 37183987 37184167 -165901365 - MER4C LTR ERV1 0 465 283 410 196 11 22 chr5 37184201 37184293 -165901239 - LTR34 LTR ERV1 -180 519 429 452 223 27 18 chr5 37184382 37184494 -165901038 - MER4C LTR ERV1 -352 113 1 30 59 0 0 chr5 37184588 37184639 -165900893 + AT_rich Low_complexity Low_complexity 1 51 0 237 221 15 0 chr5 37184855 37184923 -165900609 - L1M4 LINE L1 -2887 3259 3191 3552 133 27 2 chr5 37184928 37185483 -165900049 + MER61E LTR ERV1 1 569 0 181 136 23 23 chr5 37185496 37185540 -165899992 + CT-rich Low_complexity Low_complexity 1 44 0 357 274 122 57 chr5 37185542 37185772 -165899760 - L1M4 LINE L1 -2973 3173 2929 22 56 0 0 chr5 37185800 37185836 -165899696 + AT_rich Low_complexity Low_complexity 1 36 0 1205 303 52 32 chr5 37186444 37186945 -165898587 - LTR40a LTR ERVL -8 511 1 215 348 191 15 chr5 37188407 37188611 -165896921 + L3 LINE CR1 1245 1484 -93 536 256 36 0 chr5 37189369 37189506 -165896026 - MLT1F1 LTR MaLR 0 567 426 2007 167 20 41 chr5 37189531 37189921 -165895611 - MSTB LTR MaLR 0 426 45 535 272 8 62 chr5 37190091 37190345 -165895187 - MLT1E LTR MaLR -327 240 1 184 418 20 0 chr5 37191168 37191266 -165894266 - MIR SINE MIR -115 147 48 194 373 107 40 chr5 37192179 37192329 -165893203 - MIR SINE MIR -41 221 62 407 356 77 49 chr5 37193179 37193712 -165891820 + L2 LINE L2 1700 2247 -1067 21 0 0 0 chr5 37194153 37194174 -165891358 + AT_rich Low_complexity Low_complexity 1 21 0 1177 225 51 18 chr5 37194502 37194835 -165890697 + MER2 DNA MER2_type 1 344 0 1688 259 75 47 chr5 37195174 37196137 -165889395 - L1M4 LINE L1 -1455 4691 3702 28 0 0 0 chr5 37196582 37196610 -165888922 + AT_rich Low_complexity Low_complexity 1 28 0 633 192 354 28 chr5 37196613 37196776 -165888756 - MLT1A2 LTR MaLR 0 428 319 2058 90 40 13 chr5 37196776 37197076 -165888456 + AluSq SINE Alu 1 308 -5 633 192 354 28 chr5 37197076 37197193 -165888339 - MLT1A2 LTR MaLR -109 319 1 59 75 0 7 chr5 37197708 37197809 -165887723 + AT_rich Low_complexity Low_complexity 1 102 -44 1672 137 0 8 chr5 37197809 37198065 -165887467 - AluSx SINE Alu -24 288 35 59 75 0 7 chr5 37198065 37198110 -165887422 + AT_rich Low_complexity Low_complexity 102 146 0 895 119 0 0 chr5 37198469 37198603 -165886929 - L1PA16 LINE L1 0 6166 6033 2128 132 16 0 chr5 37198685 37198989 -165886543 + AluSg1 SINE Alu 1 309 0 22 35 0 0 chr5 37199382 37199411 -165886121 + AT_rich Low_complexity Low_complexity 1 29 0 200 221 0 15 chr5 37199899 37199967 -165885565 + GA-rich Low_complexity Low_complexity 2 68 0 357 298 42 59 chr5 37200433 37200671 -165884861 - MLT1I LTR MaLR -22 387 154 429 171 26 0 chr5 37200678 37200754 -165884778 - MER2 DNA MER2_type -1 344 267 284 223 54 6 chr5 37200802 37200929 -165884603 - MER2 DNA MER2_type -140 205 1 261 346 55 0 chr5 37200934 37201061 -165884471 - MLT1I LTR MaLR -270 139 6 2279 58 7 0 chr5 37201412 37201689 -165883843 - AluY SINE Alu -9 302 24 611 224 166 27 chr5 37202171 37202394 -165883138 - MLT1D LTR MaLR 0 505 252 1295 242 11 55 chr5 37202394 37202774 -165882758 - MLT1B LTR MaLR 0 390 28 624 256 10 50 chr5 37202892 37203091 -165882441 - MLT1D LTR MaLR -314 191 1 186 341 68 11 chr5 37203544 37203632 -165881900 + L3b LINE CR1 1482 1574 -9 318 67 0 0 chr5 37203669 37203714 -165881818 + (TA)n Simple_repeat Simple_repeat 1 45 0 241 218 18 0 chr5 37204815 37204870 -165880662 + (TA)n Simple_repeat Simple_repeat 2 57 0 201 147 0 0 chr5 37205024 37205058 -165880474 + (T)n Simple_repeat Simple_repeat 1 34 0 23 33 0 0 chr5 37205140 37205170 -165880362 + AT_rich Low_complexity Low_complexity 1 30 0 2007 147 0 6 chr5 37205275 37205589 -165879943 - AluSx SINE Alu 0 312 1 818 158 42 37 chr5 37205941 37206131 -165879401 + L1MA9 LINE L1 6093 6283 -29 1086 158 19 0 chr5 37206132 37206341 -165879191 - L1MA8 LINE L1 -5 6286 6074 270 314 0 0 chr5 37206986 37207072 -165878460 + MER63 DNA MER1_type 691 776 -285 953 266 125 68 chr5 37207172 37207676 -165877856 + MLT1H LTR MaLR 3 535 -14 234 105 0 0 chr5 37207778 37207816 -165877716 + (CA)n Simple_repeat Simple_repeat 1 38 0 2166 81 0 3 chr5 37208220 37208504 -165877028 + AluY SINE Alu 1 306 0 208 0 0 0 chr5 37208504 37208527 -165877005 + (TAAA)n Simple_repeat Simple_repeat 2 120 0 1096 211 104 47 chr5 37208670 37209073 -165876459 - LTR56 LTR ERV1 0 445 20 243 366 45 36 chr5 37209094 37209206 -165876326 - L2 LINE L2 -2 3270 3158 941 174 22 121 chr5 37209285 37209673 -165875859 + LTR37A LTR ERV1 1 426 0 375 328 70 5 chr5 37209794 37209980 -165875552 - MER67A LTR ERV1 0 543 346 285 338 108 79 chr5 37210284 37210878 -165874654 - L2 LINE L2 -349 2965 2355 294 91 0 0 chr5 37210979 37211023 -165874509 + L1P LINE L1 4424 4467 -1679 44 35 0 0 chr5 37211069 37211127 -165874405 + AT_rich Low_complexity Low_complexity 1 58 0 186 118 0 0 chr5 37212115 37212149 -165873383 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 242 318 61 61 chr5 37212263 37212411 -165873121 + L2 LINE L2 3159 3306 -7 285 255 0 43 chr5 37213191 37213285 -165872247 + L1MC4 LINE L1 6614 6703 -1339 261 250 0 0 chr5 37213285 37213361 -165872171 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 236 313 38 0 chr5 37213414 37213494 -165872038 - MIR SINE MIR -54 208 126 436 338 43 23 chr5 37213825 37214124 -165871408 + MLT1I LTR MaLR 97 401 -8 24 67 0 0 chr5 37214303 37214348 -165871184 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 37214758 37214794 -165870738 + AT_rich Low_complexity Low_complexity 1 36 0 277 43 43 0 chr5 37218138 37218185 -165867347 + (CTATT)n Simple_repeat Simple_repeat 2 50 0 337 230 54 0 chr5 37218577 37218650 -165866882 + MER63 DNA MER1_type 27 729 -333 1235 226 130 31 chr5 37218650 37219066 -165866466 + MLT1C LTR MaLR 3 459 -8 419 244 7 7 chr5 37219066 37219182 -165866350 + MER63 DNA MER1_type 715 1055 -6 231 122 0 0 chr5 37219478 37219519 -165866013 - L1MA4A LINE L1 -7 6296 6256 186 71 0 0 chr5 37219818 37219846 -165865686 + (TA)n Simple_repeat Simple_repeat 1 28 0 352 358 130 12 chr5 37220043 37220373 -165865159 - L1ME LINE L1 -501 5663 5295 641 225 8 0 chr5 37221138 37221267 -165864265 - FLAM_A SINE Alu -3 130 1 29 0 0 0 chr5 37221269 37221298 -165864234 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 37221352 37221381 -165864151 + AT_rich Low_complexity Low_complexity 1 29 0 6306 34 0 0 chr5 37222301 37223048 -165862484 - L1PA4 LINE L1 -8 6147 5401 1944 117 0 18 chr5 37223130 37223412 -165862120 + AluSg SINE Alu 1 277 -33 1181 51 17 11 chr5 37223414 37223589 -165861943 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 22 56 0 0 chr5 37226035 37226071 -165859461 + AT_rich Low_complexity Low_complexity 1 36 0 681 322 98 42 chr5 37227114 37227322 -165858210 - LTR16C LTR ERVL -1 490 295 2255 140 89 8 chr5 37227322 37227716 -165857816 + MSTA LTR MaLR 3 428 0 681 322 98 42 chr5 37227716 37227886 -165857646 - LTR16C LTR ERVL -196 295 91 24 53 0 0 chr5 37228619 37228657 -165856875 + AT_rich Low_complexity Low_complexity 1 38 0 2145 110 3 0 chr5 37229031 37229332 -165856200 - AluSc SINE Alu -7 302 1 434 218 109 27 chr5 37230016 37230163 -165855369 + MLT1H LTR MaLR 1 159 -390 2274 78 10 3 chr5 37230405 37230714 -165854818 + AluY SINE Alu 1 311 0 2053 178 38 59 chr5 37230810 37231287 -165854245 - MLT1C LTR MaLR 0 467 1 414 211 92 0 chr5 37231297 37231406 -165854126 - MLT1H LTR MaLR -5 544 426 338 310 91 21 chr5 37231516 37231703 -165853829 + L2 LINE L2 3098 3297 -16 218 138 77 15 chr5 37231725 37231790 -165853742 + (TTAA)n Simple_repeat Simple_repeat 3 71 0 261 185 15 31 chr5 37234141 37234206 -165851326 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 22 0 0 0 chr5 37235278 37235300 -165850232 + AT_rich Low_complexity Low_complexity 1 22 0 675 205 0 0 chr5 37235684 37235811 -165849721 + FLAM_A SINE Alu 4 130 -3 218 96 0 96 chr5 37235814 37235866 -165849666 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1938 130 31 0 chr5 37236035 37236328 -165849204 + AluSx SINE Alu 1 302 -10 186 103 0 0 chr5 37236756 37236782 -165848750 + (CA)n Simple_repeat Simple_repeat 1 55 0 186 103 0 0 chr5 37236782 37236811 -165848721 + (CA)n Simple_repeat Simple_repeat 2 30 0 1769 209 58 78 chr5 37238412 37238806 -165846726 + MLT1D LTR MaLR 3 386 -119 1474 204 81 20 chr5 37238806 37239150 -165846382 - MLT1A1 LTR MaLR 0 365 1 1769 209 58 78 chr5 37239150 37239268 -165846264 + MLT1D LTR MaLR 386 505 0 1687 190 0 3 chr5 37239470 37239759 -165845773 + AluJb SINE Alu 3 290 -22 21 0 0 0 chr5 37240258 37240279 -165845253 + AT_rich Low_complexity Low_complexity 1 21 0 248 0 31 0 chr5 37240411 37240443 -165845089 + (TG)n Simple_repeat Simple_repeat 2 34 0 429 268 17 84 chr5 37240851 37241030 -165844502 + MLT1F LTR MaLR 4 170 -372 225 65 0 0 chr5 37241387 37241418 -165844114 + (TG)n Simple_repeat Simple_repeat 2 32 0 416 19 19 0 chr5 37242238 37242291 -165843241 + (TG)n Simple_repeat Simple_repeat 2 55 0 1995 181 33 44 chr5 37242292 37242846 -165842686 + MLT2A2 LTR ERVL 3 554 0 1776 32 9 0 chr5 37244943 37245163 -165840369 + L1PA4 LINE L1 5929 6150 -5 22 35 0 0 chr5 37245542 37245571 -165839961 + AT_rich Low_complexity Low_complexity 1 29 0 367 300 80 45 chr5 37247996 37248313 -165837219 + L1MC/D LINE L1 5283 5609 -512 41 93 0 0 chr5 37248325 37248443 -165837089 + AT_rich Low_complexity Low_complexity 1 118 0 232 302 10 10 chr5 37248459 37248555 -165836977 + L1MC/D LINE L1 5711 5806 -2002 2865 145 57 32 chr5 37248562 37249203 -165836329 + L1P5 LINE L1 5084 5780 -376 242 57 0 0 chr5 37249198 37249233 -165836299 - L1P4 LINE L1 -482 5686 5652 * 1378 124 0 0 chr5 37249244 37249445 -165836087 + L1PB4 LINE L1 5580 5780 -376 * 2354 77 3 6 chr5 37249440 37249637 -165835895 - L1P4 LINE L1 -477 5686 5489 2153 102 0 55 chr5 37249637 37249962 -165835570 - AluSg SINE Alu -3 307 1 2354 77 3 6 chr5 37249962 37250089 -165835443 - L1P4 LINE L1 -674 5489 5363 3273 96 4 18 chr5 37250089 37250576 -165834956 + L1PA13 LINE L1 5676 6157 -6 1788 199 0 37 chr5 37250585 37250622 -165834910 + L1PB4 LINE L1 5769 5806 -350 210 91 0 0 chr5 37250622 37250655 -165834877 + (CA)n Simple_repeat Simple_repeat 2 34 0 1788 199 0 37 chr5 37250655 37251019 -165834513 + L1PB4 LINE L1 5806 6155 -1 298 151 27 0 chr5 37252340 37252413 -165833119 + (TG)n Simple_repeat Simple_repeat 2 76 0 24 0 0 0 chr5 37252413 37252437 -165833095 + AT_rich Low_complexity Low_complexity 1 24 0 228 143 0 0 chr5 37252437 37252479 -165833053 + (CA)n Simple_repeat Simple_repeat 2 43 0 260 89 0 22 chr5 37253507 37253552 -165831980 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4746 56 0 0 chr5 37253899 37254488 -165831044 + L1PA7 LINE L1 5560 6148 -6 2007 135 3 26 chr5 37255464 37255768 -165829764 + AluSx SINE Alu 2 298 -14 208 221 26 13 chr5 37257637 37257714 -165827818 + (TA)n Simple_repeat Simple_repeat 1 78 0 435 194 23 11 chr5 37257734 37257909 -165827623 + (TA)n Simple_repeat Simple_repeat 2 178 0 1278 169 20 8 chr5 37258266 37258515 -165827017 - Tigger2a DNA MER2_type -2 432 181 962 169 5 51 chr5 37258567 37258762 -165826770 - Tigger2a DNA MER2_type -248 186 1 691 140 2 2 chr5 37259370 37259495 -165826037 - LTR38B LTR ERV1 -12 599 476 2282 154 0 5 chr5 37259495 37259871 -165825661 - LTR38B LTR ERV1 -236 374 1 333 305 67 79 chr5 37260815 37261221 -165824311 + MLT1J1 LTR MaLR 24 424 -22 180 111 0 0 chr5 37261608 37261635 -165823897 + (CA)n Simple_repeat Simple_repeat 2 28 0 383 283 69 25 chr5 37261778 37262054 -165823478 + L1M4 LINE L1 4116 4403 -1743 1781 199 5 28 chr5 37262374 37262771 -165822761 - L1PA16 LINE L1 0 6166 5779 1618 225 35 39 chr5 37262857 37263320 -165822212 - L1ME2 LINE L1 -8 6156 5696 1118 288 90 36 chr5 37263322 37264425 -165821107 + L1P4 LINE L1 4396 5562 -612 288 224 0 0 chr5 37264522 37264589 -165820943 + (TG)n Simple_repeat Simple_repeat 2 68 0 1021 321 54 6 chr5 37264589 37265090 -165820442 + L1ME3A LINE L1 5609 6133 -37 1036 278 48 68 chr5 37265476 37265885 -165819647 - LTR40a LTR ERVL -9 510 112 2382 62 0 37 chr5 37265885 37266207 -165819325 + AluY SINE Alu 1 310 -1 1036 278 48 68 chr5 37266207 37266315 -165819217 - LTR40a LTR ERVL -407 112 3 879 296 41 13 chr5 37266348 37266740 -165818792 + L1M4 LINE L1 3543 3945 -2201 548 248 291 21 chr5 37266747 37267315 -165818217 + Zaphod DNA AcHobo 297 1017 -3014 300 249 210 28 chr5 37267315 37267496 -165818036 + Zaphod DNA AcHobo 3818 4031 0 23 33 0 0 chr5 37267620 37267650 -165817882 + AT_rich Low_complexity Low_complexity 1 30 0 245 114 23 0 chr5 37267650 37267694 -165817838 - L1PB2 LINE L1 -2 6149 6105 2048 112 25 109 chr5 37267697 37268091 -165817441 + THE1B LTR MaLR 4 364 0 1035 177 57 104 chr5 37268108 37268424 -165817108 - AluJb SINE Alu 0 302 2 9225 196 20 61 chr5 37268441 37268742 -165816790 - L1PA16 LINE L1 -74 6808 6496 2034 123 3 10 chr5 37268742 37269051 -165816481 - AluSc SINE Alu -2 307 1 9225 196 20 61 chr5 37269051 37269102 -165816430 - L1PA16 LINE L1 -386 6496 6444 524 40 158 0 chr5 37269102 37269178 -165816354 - AluY SINE Alu -13 298 211 9225 196 20 61 chr5 37269178 37269872 -165815660 - L1PA16 LINE L1 -438 6444 5723 2096 126 0 0 chr5 37269872 37270166 -165815366 - AluSc SINE Alu -15 294 1 9225 196 20 61 chr5 37270166 37271262 -165814270 - L1PA16 LINE L1 -1159 5723 4830 2462 71 0 0 chr5 37271262 37271573 -165813959 - AluY SINE Alu 0 311 1 9225 196 20 61 chr5 37271573 37272842 -165812690 - L1PA16 LINE L1 -2052 4830 3510 329 282 97 46 chr5 37272820 37273036 -165812496 - L1PA16 LINE L1 -6114 749 523 * 1571 163 58 79 chr5 37273043 37273423 -165812109 + THE1C LTR MaLR 4 375 0 1674 220 21 13 chr5 37273427 37273814 -165811718 - L1PA16 LINE L1 -6347 516 127 380 317 17 0 chr5 37273946 37274066 -165811466 - MER94 DNA DNA -1 133 12 510 319 109 22 chr5 37274625 37275046 -165810486 + MLT1K LTR MaLR 85 561 -27 195 100 0 0 chr5 37276837 37276867 -165808665 + (T)n Simple_repeat Simple_repeat 1 30 0 192 214 0 0 chr5 37277506 37277562 -165807970 + (TG)n Simple_repeat Simple_repeat 1 56 0 1901 155 3 3 chr5 37277696 37277999 -165807533 - AluSx SINE Alu -9 303 1 37 0 0 0 chr5 37278105 37278142 -165807390 + AT_rich Low_complexity Low_complexity 1 37 0 1910 131 14 3 chr5 37278148 37278445 -165807087 + AluSq SINE Alu 1 300 -13 27 0 0 0 chr5 37280096 37280123 -165805409 + AT_rich Low_complexity Low_complexity 1 27 0 590 305 32 0 chr5 37280458 37280704 -165804828 - L1MC5 LINE L1 -48 7913 7660 519 212 53 99 chr5 37280715 37281017 -165804515 - L1MC5 LINE L1 -589 7372 7085 226 341 64 6 chr5 37281105 37281278 -165804254 - L1MC4a LINE L1 -1063 6745 6563 23 54 0 0 chr5 37281637 37281674 -165803858 + AT_rich Low_complexity Low_complexity 1 37 0 335 200 18 27 chr5 37282352 37282462 -165803070 - L1MD3 LINE L1 0 7995 7887 2379 58 0 23 chr5 37282540 37282850 -165802682 + AluY SINE Alu 1 303 -8 26 64 0 0 chr5 37282902 37282949 -165802583 + AT_rich Low_complexity Low_complexity 1 47 0 1900 113 47 0 chr5 37283190 37283464 -165802068 - AluSg SINE Alu -23 287 1 351 216 14 0 chr5 37283696 37283770 -165801762 - L1PB4 LINE L1 -3 6153 6079 184 75 25 25 chr5 37283988 37284028 -165801504 + (TA)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr5 37284586 37284614 -165800918 + (TA)n Simple_repeat Simple_repeat 1 28 0 329 143 0 16 chr5 37284614 37284677 -165800855 + (CA)n Simple_repeat Simple_repeat 1 62 0 233 233 0 0 chr5 37284677 37284720 -165800812 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 276 281 0 0 chr5 37284723 37284812 -165800720 + L1MC4 LINE L1 6615 6703 -1339 275 315 148 0 chr5 37285356 37285499 -165800033 + MIR SINE MIR 37 198 -64 244 325 0 0 chr5 37288289 37288372 -165797160 + L1ME1 LINE L1 6079 6161 -5 475 277 120 16 chr5 37288829 37289013 -165796519 - MER3 DNA MER1_type -5 204 2 681 215 76 5 chr5 37290253 37290476 -165795056 + Charlie5 DNA MER1_type 2348 2586 -26 1315 231 36 23 chr5 37291393 37291696 -165793836 - MLT1A1 LTR MaLR -57 308 2 588 263 24 14 chr5 37291713 37291922 -165793610 + L1MC3 LINE L1 4455 4665 -1481 6832 221 46 40 chr5 37291922 37293668 -165791864 + L1MC3 LINE L1 4942 6719 -1066 1777 152 54 0 chr5 37293668 37293964 -165791568 + AluSx SINE Alu 1 312 0 6832 221 46 40 chr5 37293964 37294535 -165790997 + L1MC3 LINE L1 6719 7285 -500 852 191 24 0 chr5 37294570 37294738 -165790794 + Tigger4(Zombi) DNA MER2_type 435 606 -2125 * 1555 144 22 7 chr5 37294734 37295011 -165790521 + Tigger4(Zombi) DNA MER2_type 2450 2730 -1 4254 26 0 0 chr5 37295012 37295548 -165789984 + L1PA4 LINE L1 5639 6174 0 912 219 64 112 chr5 37295553 37295946 -165789586 - MLT1A2 LTR MaLR 0 374 1 421 211 32 11 chr5 37295946 37296041 -165789491 + L1MC3 LINE L1 7682 7778 -7 310 272 96 103 chr5 37296178 37296626 -165788906 + L1MEc LINE L1 1113 1557 -4839 22 0 0 0 chr5 37296742 37296764 -165788768 + AT_rich Low_complexity Low_complexity 1 22 0 228 274 120 69 chr5 37298041 37298216 -165787316 + MLT1J LTR MaLR 1 184 -327 314 333 38 19 chr5 37298261 37298420 -165787112 + MLT1J2 LTR MaLR 266 427 -23 509 288 103 92 chr5 37298673 37298858 -165786674 + L1MEc LINE L1 3278 3459 -2756 2248 53 3 3 chr5 37298858 37299172 -165786360 + AluSc SINE Alu 1 314 0 509 288 103 92 chr5 37299172 37299596 -165785936 + L1MEc LINE L1 3459 3895 -2320 306 50 0 0 chr5 37301274 37301314 -165784218 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1535 164 26 58 chr5 37302296 37302608 -165782924 - AluJo SINE Alu -10 302 1 196 353 39 45 chr5 37303055 37303211 -165782321 - MIR SINE MIR -73 189 35 1007 149 0 0 chr5 37303611 37303772 -165781760 - AluJb SINE Alu -7 305 145 241 67 0 0 chr5 37303773 37303803 -165781729 - Alu SINE Alu -128 172 143 428 231 125 0 chr5 37303828 37303932 -165781600 - AluJo SINE Alu -131 181 65 25 0 0 0 chr5 37304875 37304900 -165780632 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 37305197 37305225 -165780307 + AT_rich Low_complexity Low_complexity 1 28 0 606 28 0 0 chr5 37306663 37306735 -165778797 + (GA)n Simple_repeat Simple_repeat 1 72 0 337 274 48 48 chr5 37309404 37309528 -165776004 - MIR SINE MIR -50 212 89 21 0 0 0 chr5 37309905 37309926 -165775606 + AT_rich Low_complexity Low_complexity 1 21 0 214 191 0 0 chr5 37310503 37310545 -165774987 + T-rich Low_complexity Low_complexity 1 42 0 255 260 74 107 chr5 37311864 37311924 -165773608 - MIR SINE MIR -55 207 147 955 62 78 0 chr5 37311924 37312052 -165773480 + MER85 DNA T2_type 1 138 -1 255 260 74 107 chr5 37312052 37312185 -165773347 - MIR SINE MIR -115 147 16 281 186 0 71 chr5 37312611 37312681 -165772851 + MER53 DNA DNA 2 66 -123 234 0 0 0 chr5 37312683 37312709 -165772823 + (CA)n Simple_repeat Simple_repeat 1 26 0 1462 179 157 0 chr5 37312709 37313022 -165772510 - MER47A DNA MER2_type -4 362 1 309 51 0 0 chr5 37313024 37313063 -165772469 + (CA)n Simple_repeat Simple_repeat 2 40 0 203 220 20 0 chr5 37313167 37313217 -165772315 + (TA)n Simple_repeat Simple_repeat 1 51 0 340 150 0 0 chr5 37313217 37313277 -165772255 + MER53 DNA DNA 129 188 -1 243 61 0 0 chr5 37314619 37314652 -165770880 + (TA)n Simple_repeat Simple_repeat 2 34 0 293 196 36 0 chr5 37314662 37314718 -165770814 + MER94 DNA DNA 30 87 -47 24 32 0 0 chr5 37314968 37314999 -165770533 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 37315337 37315366 -165770166 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 37315509 37315537 -165769995 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr5 37316751 37316782 -165768750 + AT_rich Low_complexity Low_complexity 1 31 0 2218 60 4 4 chr5 37317840 37318164 -165767368 - AluY SINE Alu 0 324 1 912 187 0 0 chr5 37318224 37318405 -165767127 - AluJb SINE Alu 0 315 135 311 312 91 71 chr5 37318420 37318728 -165766804 + L2 LINE L2 1871 2184 -1130 2383 80 0 3 chr5 37319592 37319904 -165765628 - AluY SINE Alu 0 311 1 23 33 0 0 chr5 37319925 37319955 -165765577 + AT_rich Low_complexity Low_complexity 1 30 0 538 213 17 104 chr5 37320102 37320332 -165765200 - L1MA9 LINE L1 -42 6270 6061 211 272 99 25 chr5 37321396 37321477 -165764055 - MER5A DNA MER1_type -68 121 35 200 306 174 0 chr5 37321763 37321884 -165763648 - MIR SINE MIR -119 143 2 439 331 68 37 chr5 37322040 37322363 -165763169 + LTR16A LTR ERVL 117 449 -1 2411 67 0 0 chr5 37322739 37323039 -165762493 - AluY SINE Alu -11 300 1 295 145 29 0 chr5 37323765 37323834 -165761698 + (TA)n Simple_repeat Simple_repeat 2 72 0 2019 102 0 11 chr5 37323994 37324302 -165761230 + AluSx SINE Alu 1 305 0 278 315 254 14 chr5 37324312 37324674 -165760858 + L3 LINE CR1 456 904 -673 234 157 29 14 chr5 37324675 37324745 -165760787 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 212 299 156 49 chr5 37324750 37324974 -165760558 + L3 LINE CR1 937 1184 -393 21 0 0 0 chr5 37325343 37325364 -165760168 + AT_rich Low_complexity Low_complexity 1 21 0 2402 77 0 3 chr5 37326721 37327031 -165758501 - AluSg SINE Alu -1 309 1 2365 92 0 25 chr5 37327879 37328196 -165757336 - AluSc SINE Alu 0 309 1 198 283 0 0 chr5 37330730 37330776 -165754756 + L2 LINE L2 3141 3186 -86 288 0 0 0 chr5 37331021 37331053 -165754479 + (TG)n Simple_repeat Simple_repeat 2 33 0 264 381 15 0 chr5 37331831 37331965 -165753567 - MIR SINE MIR -114 148 13 2038 80 83 0 chr5 37332942 37333230 -165752302 + AluSp SINE Alu 1 312 -1 919 226 116 81 chr5 37333855 37334014 -165751518 + MSTD LTR MaLR 1 153 -243 2165 126 3 0 chr5 37334014 37334315 -165751217 + AluSx SINE Alu 1 302 -10 919 226 116 81 chr5 37334315 37334527 -165751005 + MSTD LTR MaLR 153 385 -11 1509 271 31 35 chr5 37335328 37335849 -165749683 - LTR40a LTR ERVL 0 519 1 262 299 8 8 chr5 37336873 37337007 -165748525 + (TA)n Simple_repeat Simple_repeat 2 135 0 183 184 0 0 chr5 37337705 37337743 -165747789 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1949 122 3 11 chr5 37338328 37338615 -165746917 + AluSq SINE Alu 1 285 -28 279 223 0 0 chr5 37338615 37338727 -165746805 + (TA)n Simple_repeat Simple_repeat 1 112 0 903 121 57 0 chr5 37338800 37338921 -165746611 + AluSq/x SINE Alu 1 132 -180 189 74 0 0 chr5 37338921 37338948 -165746584 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 903 121 57 0 chr5 37338948 37338966 -165746566 + AluSq/x SINE Alu 132 148 -164 192 77 0 0 chr5 37338987 37339013 -165746519 + (A)n Simple_repeat Simple_repeat 1 26 0 34 0 0 0 chr5 37339143 37339177 -165746355 + AT_rich Low_complexity Low_complexity 1 34 0 237 308 96 19 chr5 37341037 37341141 -165744391 - MIR3 SINE MIR -31 177 66 282 268 71 16 chr5 37341603 37341730 -165743802 - L2 LINE L2 -1205 2109 1976 24 32 0 0 chr5 37342435 37342466 -165743066 + AT_rich Low_complexity Low_complexity 1 31 0 7835 33 0 0 chr5 37342620 37343557 -165741975 - L1PA4 LINE L1 -1819 4327 3391 8645 38 2 0 chr5 37343557 37345392 -165740140 + L1PA4 LINE L1 4304 6153 -2 1779 151 16 31 chr5 37346328 37346645 -165738887 - AluSx SINE Alu 0 312 1 1093 204 30 15 chr5 37346655 37346919 -165738613 + L1PA16 LINE L1 5881 6148 -18 1648 136 35 91 chr5 37348105 37348280 -165737252 + THE1C LTR MaLR 1 184 -191 2133 124 3 3 chr5 37348280 37348579 -165736953 - AluSq SINE Alu -14 299 1 1648 136 35 91 chr5 37348579 37348800 -165736732 + THE1C LTR MaLR 184 375 0 4169 118 72 58 chr5 37348800 37349572 -165735960 + THE1C-int LTR MaLR 1 783 -797 24 32 0 0 chr5 37349745 37349776 -165735756 + AT_rich Low_complexity Low_complexity 1 31 0 245 322 59 0 chr5 37349976 37350128 -165735404 - L1M4 LINE L1 -1721 4425 4265 338 299 28 33 chr5 37350345 37350559 -165734973 - L1M4 LINE L1 -2480 3666 3454 197 0 71 0 chr5 37350562 37350590 -165734942 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 948 173 0 0 chr5 37350592 37350742 -165734790 - AluJb SINE Alu -29 283 134 301 276 102 41 chr5 37350902 37351315 -165734217 - L1M4 LINE L1 -2853 3293 2856 16900 58 3 4 chr5 37351320 37354312 -165731220 - L1PA6 LINE L1 -6 6148 3157 1555 240 82 38 chr5 37354313 37354998 -165730534 - L1MC/D LINE L1 -568 5860 5137 307 313 73 8 chr5 37355124 37355383 -165730149 - L1MC/D LINE L1 -5039 1357 1082 23 33 0 0 chr5 37355538 37355568 -165729964 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 37355612 37355658 -165729874 + AT_rich Low_complexity Low_complexity 1 46 0 1936 157 51 32 chr5 37355815 37356358 -165729174 + MLT2A2 LTR ERVL 3 554 0 599 277 110 16 chr5 37356374 37356661 -165728871 + MER57A LTR ERV1 102 403 0 1470 245 122 30 chr5 37356966 37357505 -165728027 + MLT1E LTR MaLR 5 593 0 207 0 0 0 chr5 37359348 37359371 -165726161 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 528 280 91 57 chr5 37359769 37360054 -165725478 + L1ME LINE L1 4412 4686 -1476 2151 119 0 0 chr5 37360054 37360357 -165725175 + AluSx SINE Alu 2 304 -8 528 280 91 57 chr5 37360357 37361139 -165724393 + L1ME LINE L1 4686 5514 -648 40 49 0 0 chr5 37361735 37361796 -165723736 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 0 chr5 37361921 37361945 -165723587 + AT_rich Low_complexity Low_complexity 1 24 0 2429 45 0 0 chr5 37362193 37362484 -165723048 - AluY SINE Alu -20 291 1 23 33 0 0 chr5 37363348 37363378 -165722154 + AT_rich Low_complexity Low_complexity 1 30 0 26 82 0 0 chr5 37364868 37364929 -165720603 + AT_rich Low_complexity Low_complexity 1 61 0 36 53 0 0 chr5 37365914 37365971 -165719561 + AT_rich Low_complexity Low_complexity 1 57 0 1541 273 110 46 chr5 37366592 37367855 -165717677 + L1ME1 LINE L1 3783 5142 -1004 3718 48 0 0 chr5 37367871 37368331 -165717201 - L1PA4 LINE L1 -3 6152 5693 1635 70 0 0 chr5 37368331 37368544 -165716988 - L1P LINE L1 -5933 213 1 1002 230 111 19 chr5 37368600 37369048 -165716484 + L1ME1 LINE L1 5184 5674 -743 237 33 0 0 chr5 37369049 37369079 -165716453 + (CA)n Simple_repeat Simple_repeat 1 30 0 984 126 0 26 chr5 37369085 37369236 -165716296 + AluSq/x SINE Alu 1 147 -166 236 200 62 0 chr5 37369445 37369510 -165716022 + L1ME1 LINE L1 6079 6147 -19 1656 318 98 52 chr5 37369979 37371359 -165714173 - L2 LINE L2 -566 2748 1306 1546 271 31 35 chr5 37372093 37372635 -165712897 + MLT1F LTR MaLR 3 542 0 218 313 24 24 chr5 37373474 37373557 -165711975 - L2 LINE L2 0 3272 3190 287 264 126 78 chr5 37374039 37374081 -165711451 + MER5B DNA MER1_type 1 40 -138 570 206 188 6 chr5 37374081 37374241 -165711291 - MER5A DNA MER1_type 0 189 1 287 264 126 78 chr5 37374241 37374365 -165711167 + MER5B DNA MER1_type 40 175 -3 960 244 75 54 chr5 37374418 37374804 -165710728 + MLT2D LTR ERVL 1 394 -20 202 114 0 29 chr5 37374867 37374902 -165710630 + (CA)n Simple_repeat Simple_repeat 1 34 0 590 213 9 0 chr5 37375596 37375704 -165709828 + MLT1E2 LTR MaLR 438 546 -80 26 30 0 0 chr5 37375964 37375997 -165709535 + AT_rich Low_complexity Low_complexity 1 33 0 1869 99 179 13 chr5 37376999 37377311 -165708221 - THE1B LTR MaLR 0 364 1 9845 114 35 35 chr5 37377311 37378891 -165706641 - THE1B-int LTR MaLR 0 1580 1 2645 88 11 6 chr5 37378891 37379253 -165706279 - THE1B LTR MaLR 0 364 1 2860 230 44 13 chr5 37379572 37380355 -165705177 + L1MB7 LINE L1 5375 6175 -9 25 65 0 0 chr5 37381857 37381903 -165703629 + AT_rich Low_complexity Low_complexity 1 46 0 313 242 91 111 chr5 37382060 37382258 -165703274 + MLT1H LTR MaLR 141 334 -215 21 0 0 0 chr5 37382915 37382936 -165702596 + AT_rich Low_complexity Low_complexity 1 21 0 630 339 122 35 chr5 37383053 37384002 -165701530 - L2 LINE L2 -845 2469 1438 180 0 0 0 chr5 37384922 37384942 -165700590 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 25 51 0 0 chr5 37385054 37385093 -165700439 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 37385504 37385525 -165700007 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 37385710 37385735 -165699797 + AT_rich Low_complexity Low_complexity 1 25 0 689 312 23 0 chr5 37385942 37386153 -165699379 - MIR SINE MIR -8 254 40 2110 99 24 0 chr5 37386168 37386462 -165699070 - AluSq SINE Alu -12 301 1 2127 173 57 2 chr5 37386503 37386907 -165698625 + MSTB LTR MaLR 1 426 0 548 214 23 12 chr5 37387023 37387196 -165698336 + GA-rich Low_complexity Low_complexity 3 177 0 189 278 37 0 chr5 37387283 37387337 -165698195 - L2 LINE L2 -225 3047 2992 200 188 0 0 chr5 37387509 37387541 -165697991 + polypurine Low_complexity Low_complexity 4 35 0 5980 29 0 0 chr5 37387646 37388348 -165697184 - L1PA4 LINE L1 -8 6147 5446 354 288 144 6 chr5 37388796 37388956 -165696576 + MIR SINE MIR 32 213 -49 426 54 0 0 chr5 37390738 37390794 -165694738 + L1PA3 LINE L1 6097 6152 -3 25 0 0 0 chr5 37390794 37390819 -165694713 + AT_rich Low_complexity Low_complexity 1 25 0 1714 173 27 10 chr5 37391011 37391311 -165694221 - AluJb SINE Alu -7 305 1 1343 166 0 0 chr5 37391722 37391939 -165693593 + AluSq SINE Alu 78 294 -19 29 0 0 0 chr5 37392224 37392253 -165693279 + AT_rich Low_complexity Low_complexity 1 29 0 1276 120 0 0 chr5 37392514 37392714 -165692818 + L1PB1 LINE L1 1 200 -6663 10182 154 45 13 chr5 37392716 37396269 -165689263 + L1PB1 LINE L1 636 4445 -2417 1119 227 3 13 chr5 37396298 37396606 -165688926 - L1 LINE L1 -2726 3420 3116 7118 172 16 4 chr5 37396621 37399029 -165686503 + L1PB1 LINE L1 4427 6858 -9 183 369 57 16 chr5 37399135 37399257 -165686275 + MIR3 SINE MIR 79 205 -3 244 259 17 0 chr5 37400670 37400728 -165684804 + MIR SINE MIR 96 154 -108 10709 194 33 8 chr5 37401014 37403019 -165682513 + L1MA3 LINE L1 1 2057 -5508 5290 149 17 13 chr5 37403009 37403765 -165681767 + L1MA3 LINE L1 6319 7086 -638 * 2083 124 53 31 chr5 37403765 37404121 -165681411 - THE1B LTR MaLR 0 364 1 5290 149 17 13 chr5 37404121 37404587 -165680945 + L1MA3 LINE L1 7086 7549 -175 616 183 63 0 chr5 37405464 37405590 -165679942 - MER20 DNA MER1_type 0 219 86 923 267 33 28 chr5 37405590 37405949 -165679583 + MLT1A1 LTR MaLR 1 361 -4 916 247 4 38 chr5 37405960 37406223 -165679309 + MLT1A2 LTR MaLR 121 374 0 299 244 0 47 chr5 37406227 37406313 -165679219 - MER20 DNA MER1_type -135 84 3 180 291 38 25 chr5 37406534 37406613 -165678919 + L2 LINE L2 2777 2856 -458 318 167 0 0 chr5 37406795 37406849 -165678683 + MLT2D LTR ERVL 1 54 -360 206 216 0 0 chr5 37406931 37406968 -165678564 + (TG)n Simple_repeat Simple_repeat 2 38 0 321 189 0 27 chr5 37407039 37407113 -165678419 - L1MA4 LINE L1 -200 6100 6029 780 160 80 17 chr5 37407115 37407290 -165678242 + L1MA4 LINE L1 6114 6299 -1 347 281 116 18 chr5 37408169 37408333 -165677199 - MIR SINE MIR -13 249 70 312 330 10 0 chr5 37408405 37408505 -165677027 - MIR SINE MIR -10 252 152 27 29 0 0 chr5 37409143 37409177 -165676355 + AT_rich Low_complexity Low_complexity 1 34 0 1046 211 144 28 chr5 37410208 37410535 -165674997 - MLT1A1 LTR MaLR 0 365 1 2380 65 0 0 chr5 37410995 37411288 -165674244 - AluY SINE Alu -18 293 1 1959 98 8 0 chr5 37412476 37412741 -165672791 + AluSg SINE Alu 6 272 -38 216 0 0 0 chr5 37412743 37412767 -165672765 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 405 234 80 29 chr5 37412815 37412990 -165672542 + MER53 DNA DNA 3 186 -3 239 222 12 37 chr5 37413132 37413213 -165672319 + MER116 DNA Mariner 1 79 -1 359 296 101 12 chr5 37413386 37413555 -165671977 - MLT1C LTR MaLR 0 467 284 531 331 0 12 chr5 37413577 37413740 -165671792 - ERVL LTR ERVL -5210 554 394 4507 184 22 13 chr5 37413795 37415016 -165670516 + L1MA6 LINE L1 4977 6209 -91 288 145 49 8 chr5 37414997 37415078 -165670454 + L1MA7 LINE L1 6223 6312 0 * 1101 228 14 83 chr5 37415079 37415482 -165670050 + MLT1D-int LTR MaLR 1010 1728 -7 542 244 175 72 chr5 37415557 37415906 -165669626 + MLT1D LTR MaLR 118 502 -3 195 346 20 20 chr5 37417631 37417732 -165667800 - L3 LINE CR1 -729 848 748 468 116 45 80 chr5 37417734 37417846 -165667686 - L1MA5 LINE L1 0 6300 6193 27 29 0 0 chr5 37418278 37418312 -165667220 + AT_rich Low_complexity Low_complexity 1 34 0 719 299 48 0 chr5 37418327 37418534 -165666998 - MIR SINE MIR -44 218 2 277 278 11 22 chr5 37419855 37419945 -165665587 + (TATATG)n Simple_repeat Simple_repeat 6 94 0 22 0 0 0 chr5 37419948 37419970 -165665562 + AT_rich Low_complexity Low_complexity 1 22 0 834 152 0 14 chr5 37422376 37422521 -165663011 + FLAM_C SINE Alu 1 143 0 917 207 0 0 chr5 37422544 37422718 -165662814 + AluJb SINE Alu 122 295 -17 24 0 0 0 chr5 37422862 37422886 -165662646 + AT_rich Low_complexity Low_complexity 1 24 0 377 267 81 105 chr5 37423606 37423864 -165661668 + MIR SINE MIR 5 256 -6 6543 161 14 11 chr5 37423904 37424926 -165660606 - L1PA11 LINE L1 0 6174 5157 435 152 13 0 chr5 37424926 37425005 -165660527 - MADE1 DNA Mariner 0 80 1 6543 161 14 11 chr5 37425005 37426017 -165659515 - L1PA11 LINE L1 -1017 5157 4130 4266 181 12 21 chr5 37426017 37426867 -165658665 + L1P LINE L1 1889 2730 -3416 305 310 43 9 chr5 37427221 37427337 -165658195 - L2 LINE L2 0 3313 3194 275 328 148 55 chr5 37427329 37427895 -165657637 + L2 LINE L2 2673 3268 -4 * 24 53 0 0 chr5 37428084 37428122 -165657410 + AT_rich Low_complexity Low_complexity 1 38 0 474 88 0 0 chr5 37428181 37428249 -165657283 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 23 68 0 0 chr5 37429542 37429586 -165655946 + AT_rich Low_complexity Low_complexity 1 44 0 284 68 0 23 chr5 37429889 37429933 -165655599 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 4069 196 21 14 chr5 37430376 37431240 -165654292 - L1MB1 LINE L1 -3 6165 5296 587 220 0 9 chr5 37431245 37431471 -165654061 + CT-rich Low_complexity Low_complexity 1 223 0 2564 254 21 12 chr5 37431475 37431855 -165653677 - L1MB1 LINE L1 -847 5299 4924 1793 128 33 4 chr5 37431855 37432161 -165653371 - AluSg SINE Alu 0 314 1 2564 254 21 12 chr5 37432161 37432524 -165653008 - L1MB1 LINE L1 -1222 4924 4548 1733 197 52 17 chr5 37432539 37433005 -165652527 + L1M4 LINE L1 4026 4507 -1639 353 215 43 0 chr5 37433006 37433099 -165652433 + L1M4 LINE L1 4444 4540 -1606 1689 92 5 0 chr5 37433128 37433346 -165652186 + AluSg/x SINE Alu 77 295 -17 1044 235 165 54 chr5 37434606 37435119 -165650413 + MLT1F1 LTR MaLR 3 567 0 21 0 0 0 chr5 37436729 37436750 -165648782 + AT_rich Low_complexity Low_complexity 1 21 0 215 265 0 0 chr5 37436856 37436905 -165648627 + (TA)n Simple_repeat Simple_repeat 2 50 0 2111 67 60 20 chr5 37437327 37437626 -165647906 + AluY SINE Alu 1 311 0 2336 46 13 3 chr5 37437765 37438070 -165647462 + L1PA5 LINE L1 5847 6154 0 232 314 66 8 chr5 37438725 37438846 -165646686 + L1MB3 LINE L1 101 228 -6314 27 0 0 0 chr5 37439264 37439291 -165646241 + AT_rich Low_complexity Low_complexity 1 27 0 193 366 204 0 chr5 37439409 37439502 -165646030 + L2 LINE L2 3142 3253 -19 292 202 0 48 chr5 37439969 37440053 -165645479 + L1MC4 LINE L1 6624 6703 -1339 3030 234 73 36 chr5 37440675 37441752 -165643780 + L1MB3 LINE L1 3891 5007 -1637 285 133 0 11 chr5 37441774 37441849 -165643683 + L1MB3 LINE L1 5788 5860 -809 2648 227 45 18 chr5 37441859 37441996 -165643536 + L1MB3 LINE L1 5971 6103 -578 2080 128 3 3 chr5 37441996 37442309 -165643223 + AluSq SINE Alu 1 313 0 2648 227 45 18 chr5 37442309 37442854 -165642678 + L1MB3 LINE L1 6103 6672 -9 226 136 51 0 chr5 37443113 37443172 -165642360 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 423 0 0 0 chr5 37443844 37443891 -165641641 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 78 0 0 chr5 37444626 37444677 -165640855 + AT_rich Low_complexity Low_complexity 1 51 0 25 65 0 0 chr5 37444721 37444767 -165640765 + AT_rich Low_complexity Low_complexity 1 46 0 238 355 32 8 chr5 37444911 37445035 -165640497 + L1M4 LINE L1 608 734 -5900 262 298 64 64 chr5 37445798 37446578 -165638954 + L1M4 LINE L1 1407 2229 -4596 26 88 0 0 chr5 37446760 37446828 -165638704 + AT_rich Low_complexity Low_complexity 1 68 0 563 302 76 44 chr5 37447089 37447708 -165637824 + L1M4 LINE L1 2764 3402 -3242 186 43 0 0 chr5 37448593 37448616 -165636916 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 23 0 0 0 chr5 37450147 37450170 -165635362 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr5 37451260 37451312 -165634220 + (TG)n Simple_repeat Simple_repeat 1 52 0 2120 89 3 24 chr5 37452184 37452476 -165633056 + AluSg SINE Alu 1 286 -24 312 248 38 48 chr5 37453131 37453236 -165632296 - L1MC4 LINE L1 -1357 6685 6582 31 44 0 0 chr5 37453681 37453726 -165631806 + AT_rich Low_complexity Low_complexity 1 45 0 2225 107 0 3 chr5 37454191 37454491 -165631041 + AluSc SINE Alu 1 299 -10 3487 176 34 9 chr5 37454698 37455397 -165630135 - L1MC1 LINE L1 -1 6332 5616 23 0 0 0 chr5 37455478 37455501 -165630031 + AT_rich Low_complexity Low_complexity 1 23 0 264 357 48 16 chr5 37455891 37456017 -165629515 - MER5A DNA MER1_type -3 186 57 1377 207 48 88 chr5 37456027 37456404 -165629128 - MLT1A2 LTR MaLR -4 370 9 2030 148 0 0 chr5 37457526 37457830 -165627702 - AluSx SINE Alu -8 304 1 298 280 30 30 chr5 37457994 37458094 -165627438 + MER5A DNA MER1_type 83 182 -7 25 51 0 0 chr5 37458324 37458363 -165627169 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 37459188 37459232 -165626300 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr5 37459304 37459346 -165626186 + AT_rich Low_complexity Low_complexity 1 42 0 249 247 41 0 chr5 37459836 37459909 -165625623 + GA-rich Low_complexity Low_complexity 2 77 0 368 192 14 14 chr5 37460256 37460329 -165625203 - Tigger5 DNA MER2_type 0 2323 2251 840 201 193 4 chr5 37460547 37460796 -165624736 - L1MB1 LINE L1 -648 5664 5369 * 1513 158 32 13 chr5 37460795 37461169 -165624363 + L1MB1 LINE L1 5646 6168 0 577 309 65 86 chr5 37461768 37462244 -165623288 + MLT1H1 LTR MaLR 8 473 -82 204 219 0 0 chr5 37462374 37462415 -165623117 + CT-rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 37463074 37463097 -165622435 + AT_rich Low_complexity Low_complexity 1 23 0 379 0 0 0 chr5 37463310 37463352 -165622180 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1925 125 7 0 chr5 37463352 37463633 -165621899 - AluSq SINE Alu -1 324 1 272 288 68 17 chr5 37463977 37464095 -165621437 - LTR16A LTR ERVL -324 126 3 226 268 197 56 chr5 37464256 37464398 -165621134 - L2 LINE L2 0 3313 3152 380 260 10 30 chr5 37464642 37464742 -165620790 + L2 LINE L2 3168 3265 -48 1277 215 86 38 chr5 37464762 37465043 -165620489 - MLT1C LTR MaLR -29 438 129 1874 143 58 12 chr5 37465043 37465371 -165620161 + MER61A LTR ERV1 1 343 0 1277 215 86 38 chr5 37465371 37465507 -165620025 - MLT1C LTR MaLR -338 129 1 236 246 149 118 chr5 37465910 37466105 -165619427 - L2 LINE L2 0 3313 3113 1470 239 104 73 chr5 37466144 37467045 -165618487 - MER63C DNA MER1_type -1 929 1 1648 334 133 16 chr5 37467060 37467326 -165618206 - L2 LINE L2 -284 2988 2755 2000 138 39 30 chr5 37467326 37467687 -165617845 + THE1B LTR MaLR 1 364 0 1648 334 133 16 chr5 37467687 37468392 -165617140 - L2 LINE L2 -517 2755 1909 286 353 106 17 chr5 37468487 37468722 -165616810 - L2 LINE L2 -814 2500 2245 2074 129 0 16 chr5 37469250 37469567 -165615965 - AluSx SINE Alu 0 312 1 180 0 0 0 chr5 37469801 37469821 -165615711 + (TG)n Simple_repeat Simple_repeat 2 21 0 24 0 0 0 chr5 37470954 37470978 -165614554 + AT_rich Low_complexity Low_complexity 1 24 0 189 343 71 18 chr5 37471287 37471456 -165614076 + MIR SINE MIR 69 246 -16 27 87 0 0 chr5 37472787 37472856 -165612676 + AT_rich Low_complexity Low_complexity 1 69 0 1771 172 0 13 chr5 37472943 37473257 -165612275 - AluJb SINE Alu -2 310 1 554 296 73 29 chr5 37473645 37473851 -165611681 + MIR SINE MIR 12 226 -36 2234 109 3 3 chr5 37473980 37474293 -165611239 + AluSp SINE Alu 1 313 0 207 0 0 0 chr5 37474948 37474971 -165610561 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 203 267 17 0 chr5 37475003 37475063 -165610469 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 506 227 21 0 chr5 37475549 37475690 -165609842 - L1MA8 LINE L1 -3 6288 6145 30 83 0 0 chr5 37475920 37475992 -165609540 + AT_rich Low_complexity Low_complexity 1 72 0 463 137 32 0 chr5 37476427 37476522 -165609010 + CT-rich Low_complexity Low_complexity 3 100 0 508 207 0 9 chr5 37476526 37476642 -165608890 - L1MA8 LINE L1 -5 6286 6172 1369 221 57 90 chr5 37476797 37477273 -165608259 + MER31B LTR ERV1 1 460 -6 202 257 9 179 chr5 37477274 37477492 -165608040 + L2 LINE L2 3133 3313 0 521 347 85 28 chr5 37477933 37478285 -165607247 + L1M4c LINE L1 175 546 -5767 2249 77 10 22 chr5 37478315 37478628 -165606904 - AluY SINE Alu -2 309 1 1333 275 70 7 chr5 37479142 37479886 -165605646 + L1M4c LINE L1 1426 2322 -4060 * 8096 215 39 40 chr5 37479883 37483332 -165602200 + L1MA9 LINE L1 2850 6311 -1 643 336 34 0 chr5 37484227 37484462 -165601070 + MIR SINE MIR 10 252 -10 341 331 113 7 chr5 37484495 37484867 -165600665 - L2 LINE L2 -175 3138 2725 422 323 55 89 chr5 37485260 37485585 -165599947 - L2 LINE L2 -609 2705 2392 27 22 0 22 chr5 37485657 37485677 -165599855 + AT_rich Low_complexity Low_complexity 1 20 -24 2173 92 0 24 chr5 37485677 37485969 -165599563 - AluSg SINE Alu -25 285 1 27 22 0 22 chr5 37485969 37485993 -165599539 + AT_rich Low_complexity Low_complexity 20 44 0 2160 101 6 31 chr5 37486569 37486886 -165598646 + AluSc SINE Alu 1 309 0 1841 166 0 0 chr5 37487456 37487757 -165597775 + AluSx SINE Alu 1 301 -11 26 0 0 0 chr5 37490580 37490606 -165594926 + AT_rich Low_complexity Low_complexity 1 26 0 284 320 109 0 chr5 37491130 37491258 -165594274 + MIR SINE MIR 18 159 -103 29 84 0 0 chr5 37491407 37491478 -165594054 + AT_rich Low_complexity Low_complexity 1 71 0 514 99 0 12 chr5 37492435 37492516 -165593016 + MADE1 DNA Mariner 1 80 0 2137 193 92 43 chr5 37493734 37494477 -165591055 - LTR1B LTR ERV1 0 785 9 228 222 0 0 chr5 37494542 37494587 -165590945 + L1MC4 LINE L1 6662 6706 -1336 23 0 0 0 chr5 37494753 37494776 -165590756 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr5 37495306 37495332 -165590200 + (T)n Simple_repeat Simple_repeat 1 26 0 210 118 0 0 chr5 37496172 37496206 -165589326 + (TC)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr5 37497607 37497630 -165587902 + AT_rich Low_complexity Low_complexity 1 23 0 1628 69 0 0 chr5 37497974 37498190 -165587342 - L1PA4 LINE L1 0 6155 5940 1967 26 0 0 chr5 37498190 37498424 -165587108 + L1PA4 LINE L1 5711 5944 -211 24 0 0 0 chr5 37498438 37498462 -165587070 + AT_rich Low_complexity Low_complexity 1 24 0 1519 212 16 43 chr5 37498859 37499231 -165586301 + MLT1A1 LTR MaLR 4 365 0 716 213 19 0 chr5 37500128 37500283 -165585249 + MLT1E2 LTR MaLR 468 625 -1 28 29 0 0 chr5 37500766 37500801 -165584731 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 37500928 37500953 -165584579 + AT_rich Low_complexity Low_complexity 1 25 0 184 294 35 71 chr5 37501936 37502021 -165583511 + L2 LINE L2 1398 1479 -1835 25 31 0 0 chr5 37503065 37503097 -165582435 + AT_rich Low_complexity Low_complexity 1 32 0 274 319 132 75 chr5 37503609 37504010 -165581522 + L3 LINE CR1 572 995 -582 398 331 23 12 chr5 37504012 37504184 -165581348 - MIR SINE MIR -3 259 86 210 315 19 37 chr5 37504166 37504274 -165581258 + L2 LINE L2 3199 3304 -9 * 26 0 0 0 chr5 37504380 37504406 -165581126 + AT_rich Low_complexity Low_complexity 1 26 0 1303 209 59 0 chr5 37505402 37505552 -165579980 - AluJo SINE Alu -22 290 150 381 22 0 0 chr5 37505552 37505598 -165579934 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1303 209 59 0 chr5 37505598 37505720 -165579812 - AluJo SINE Alu -162 150 2 24 0 0 0 chr5 37506151 37506175 -165579357 + AT_rich Low_complexity Low_complexity 1 24 0 22 80 0 0 chr5 37506665 37506715 -165578817 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 37506750 37506771 -165578761 + AT_rich Low_complexity Low_complexity 1 21 0 276 30 0 0 chr5 37506819 37506852 -165578680 + (CA)n Simple_repeat Simple_repeat 2 34 0 383 107 27 70 chr5 37508425 37508612 -165576920 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 2127 112 7 0 chr5 37508616 37508903 -165576629 - AluSp SINE Alu -24 289 1 201 167 0 0 chr5 37509171 37509207 -165576325 + A-rich Low_complexity Low_complexity 5 40 0 365 259 0 24 chr5 37509228 37509313 -165576219 - MER5A DNA MER1_type -88 101 19 293 299 96 46 chr5 37509761 37509958 -165575574 - L2 LINE L2 -483 2831 2625 207 383 91 44 chr5 37510026 37510433 -165575099 - L2 LINE L2 -654 2660 2235 327 356 94 7 chr5 37511560 37511709 -165573823 + MIR SINE MIR 70 231 -31 473 316 37 16 chr5 37513063 37513253 -165572279 - MIR SINE MIR -55 207 14 6673 118 31 12 chr5 37514252 37515290 -165570242 - MER11C LTR ERVK -14 1057 1 1657 177 24 3 chr5 37515321 37515660 -165569872 + L1PA15 LINE L1 1985 2330 -4509 2144 219 88 55 chr5 37515696 37516399 -165569133 + MER50 LTR ERV1 9 734 0 2764 219 3 9 chr5 37516402 37517072 -165568460 + L1PA15 LINE L1 2371 3038 -3811 8851 221 47 14 chr5 37517133 37520719 -165564813 + L1PA15 LINE L1 3041 6865 -3 24 0 0 0 chr5 37520763 37520787 -165564745 + AT_rich Low_complexity Low_complexity 1 24 0 421 310 54 5 chr5 37521153 37521337 -165564195 - L1ME LINE L1 -297 5824 5632 893 233 184 75 chr5 37521378 37522048 -165563484 + LTR50 LTR ERVL 14 756 -39 180 0 0 0 chr5 37522412 37522432 -165563100 + (TCTA)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr5 37523627 37523668 -165561864 + AT_rich Low_complexity Low_complexity 1 41 0 28 61 0 37 chr5 37523734 37523816 -165561716 + AT_rich Low_complexity Low_complexity 1 79 0 232 280 54 101 chr5 37524510 37524678 -165560854 - MLT1J2 LTR MaLR -25 425 266 273 241 38 0 chr5 37525018 37525097 -165560435 + LTR33A LTR ERVL 395 476 -47 387 273 146 6 chr5 37525143 37525308 -165560224 - MLT1J2 LTR MaLR -242 208 21 23 40 0 0 chr5 37526125 37526150 -165559382 + AT_rich Low_complexity Low_complexity 1 25 0 10625 219 46 53 chr5 37526208 37529348 -165556184 + L1MA4A LINE L1 2 3121 -3727 329 145 16 0 chr5 37529348 37529410 -165556122 + (TA)n Simple_repeat Simple_repeat 2 64 0 10086 200 30 11 chr5 37529411 37532546 -165552986 + L1MA4A LINE L1 3497 6692 -313 2131 127 3 0 chr5 37532918 37533217 -165552315 + AluSx SINE Alu 1 300 -12 300 27 0 0 chr5 37533953 37533990 -165551542 + (TG)n Simple_repeat Simple_repeat 2 38 0 512 101 0 0 chr5 37534122 37534191 -165551341 + Alu SINE Alu 226 294 -16 330 26 0 0 chr5 37535529 37535568 -165549964 + (TG)n Simple_repeat Simple_repeat 2 40 0 403 123 0 0 chr5 37535569 37535626 -165549906 - AluS SINE Alu -14 287 231 1637 107 5 0 chr5 37535628 37535852 -165549680 + AluSg/x SINE Alu 71 295 -17 1125 70 0 7 chr5 37535854 37535997 -165549535 - AluY SINE Alu -169 142 1 22 80 0 0 chr5 37537837 37537887 -165547645 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 37537986 37538007 -165547525 + AT_rich Low_complexity Low_complexity 1 21 0 1343 177 51 102 chr5 37538728 37538916 -165546616 + MLT1A1 LTR MaLR 1 162 -203 444 19 0 0 chr5 37538916 37538969 -165546563 + (TG)n Simple_repeat Simple_repeat 2 54 0 1343 177 51 102 chr5 37538969 37539153 -165546379 + MLT1A1 LTR MaLR 162 354 -11 740 201 0 0 chr5 37539154 37539293 -165546239 + L1PB4 LINE L1 6010 6148 -8 560 233 17 0 chr5 37539605 37539725 -165545807 - MER7A DNA MER2_type -226 120 1 2907 103 2 0 chr5 37541043 37541442 -165544090 + MER84 LTR ERVI 1 400 -107 1963 110 4 4 chr5 37541442 37541723 -165543809 - AluSx SINE Alu -2 310 30 280 125 21 0 chr5 37541823 37541871 -165543661 + AluSg/x SINE Alu 177 225 -75 2732 129 73 10 chr5 37541871 37542352 -165543180 + MER9 LTR ERVK 1 511 0 4361 95 11 52 chr5 37542352 37543047 -165542485 + HERVK9 LTR ERVK 1 667 -5249 * 26387 95 4 0 chr5 37543043 37546591 -165538941 + HERVK9 LTR ERVK 1626 5186 -730 564 329 4 0 chr5 37546565 37546808 -165538724 + HERVK9 LTR ERVK 5975 6218 -1735 * 3308 102 2 2 chr5 37546793 37547245 -165538287 + HERVK9 LTR ERVK 5183 5634 -282 2022 151 9 9 chr5 37547281 37547623 -165537909 + HERVK9 LTR ERVK 5635 5916 0 2837 110 73 12 chr5 37547623 37548105 -165537427 + MER9 LTR ERVK 1 511 0 330 175 0 0 chr5 37548106 37548194 -165537338 + AluS SINE Alu 222 309 0 437 161 75 11 chr5 37548194 37548287 -165537245 + MER84 LTR ERVI 409 507 0 1968 148 10 0 chr5 37548444 37548748 -165536784 + AluSq SINE Alu 1 307 -6 545 181 21 7 chr5 37548754 37548898 -165536634 + GA-rich Low_complexity Low_complexity 3 148 0 2099 120 3 3 chr5 37549011 37549310 -165536222 + AluSx SINE Alu 1 299 -13 208 274 200 32 chr5 37549491 37549586 -165535946 - L2 LINE L2 -12 3301 3191 27 49 0 0 chr5 37549839 37549880 -165535652 + AT_rich Low_complexity Low_complexity 1 41 0 229 233 0 0 chr5 37549969 37550012 -165535520 - L1PB4 LINE L1 -1405 4741 4699 4246 180 40 41 chr5 37550014 37550551 -165534981 + L1PB4 LINE L1 4744 5280 -876 255 31 0 0 chr5 37550551 37550583 -165534949 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4246 180 40 41 chr5 37550583 37551464 -165534068 + L1PB4 LINE L1 5280 6156 0 244 263 97 18 chr5 37551757 37551871 -165533661 + L1MC4 LINE L1 6568 6690 -1352 270 119 102 17 chr5 37552549 37552608 -165532924 - L1MB7 LINE L1 -9 6175 6112 24 0 0 0 chr5 37553785 37553809 -165531723 + AT_rich Low_complexity Low_complexity 1 24 0 786 201 54 25 chr5 37553816 37554020 -165531512 + MER6B DNA MER2_type 1 210 0 186 43 0 0 chr5 37554040 37554063 -165531469 + (TTA)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 37554833 37554855 -165530677 + AT_rich Low_complexity Low_complexity 1 22 0 2037 129 0 13 chr5 37554974 37555277 -165530255 - AluSx SINE Alu -13 299 1 27 0 0 65 chr5 37555520 37555566 -165529966 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 37556009 37556030 -165529502 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 37558582 37558604 -165526928 + AT_rich Low_complexity Low_complexity 1 22 0 759 50 25 25 chr5 37559004 37559125 -165526407 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 291 149 40 0 chr5 37559792 37559866 -165525666 + (ATATG)n Simple_repeat Simple_repeat 1 77 0 1987 138 0 22 chr5 37561200 37561512 -165524020 - AluSx SINE Alu -7 305 1 1573 124 24 121 chr5 37562109 37562448 -165523084 + AluYb8 SINE Alu 3 308 -10 2502 242 110 24 chr5 37562736 37562859 -165522673 + L1MD2 LINE L1 5497 5608 -751 2085 117 16 3 chr5 37562859 37563168 -165522364 - AluSq SINE Alu 0 313 1 2502 242 110 24 chr5 37563168 37563650 -165521882 + L1MD2 LINE L1 5608 6186 -173 321 100 0 0 chr5 37563650 37563700 -165521832 + (CA)n Simple_repeat Simple_repeat 1 50 0 2502 242 110 24 chr5 37563700 37563875 -165521657 + L1MD2 LINE L1 6186 6345 -14 2469 61 0 0 chr5 37564087 37564384 -165521148 - AluY SINE Alu -14 297 1 2097 129 3 0 chr5 37564646 37564948 -165520584 + AluSp SINE Alu 1 303 -10 1380 229 57 25 chr5 37565921 37566275 -165519257 + MLT1A1 LTR MaLR 1 365 0 2111 212 24 7 chr5 37566329 37566786 -165518746 + MLT1C LTR MaLR 1 465 -2 211 209 0 0 chr5 37569123 37569166 -165516366 + CT-rich Low_complexity Low_complexity 2 44 0 296 267 218 33 chr5 37569166 37569469 -165516063 + LTR33A LTR ERVL 165 523 0 2306 155 86 6 chr5 37569581 37570325 -165515207 - Tigger4(Zombi) DNA MER2_type 0 2731 1876 2229 84 0 7 chr5 37570325 37570610 -165514922 + AluY SINE Alu 1 283 -28 471 214 0 0 chr5 37570630 37570714 -165514818 - Tigger4(Zombi) DNA MER2_type -2647 84 1 1771 191 0 0 chr5 37570971 37571265 -165514267 + AluJb SINE Alu 7 300 -12 1285 174 19 63 chr5 37571330 37571600 -165513932 + AluJo SINE Alu 16 273 -39 496 180 0 0 chr5 37571600 37571689 -165513843 + AluJ/FRAM SINE Alu 222 310 -2 3020 162 10 4 chr5 37571751 37572244 -165513288 + LTR28-int LTR ERV1 6595 7090 -1 4463 200 84 21 chr5 37572252 37573205 -165512327 + LTR28 LTR ERV1 8 1020 0 356 213 64 21 chr5 37574058 37574152 -165511380 - MLT1J2 LTR MaLR -24 426 329 2499 60 3 0 chr5 37574554 37574852 -165510680 - AluY SINE Alu -12 299 1 950 143 116 37 chr5 37575351 37575540 -165509992 + AluJb SINE Alu 86 289 -23 21 0 0 0 chr5 37577328 37577349 -165508183 + AT_rich Low_complexity Low_complexity 1 21 0 1175 141 5 28 chr5 37577860 37578073 -165507459 + L1PA12 LINE L1 5961 6168 0 312 318 71 30 chr5 37578394 37578592 -165506940 + MLT1H LTR MaLR 153 358 -191 306 281 11 11 chr5 37580272 37580361 -165505171 - L1MC4 LINE L1 -1340 6702 6614 225 244 0 44 chr5 37580396 37580486 -165505046 - L1MC4 LINE L1 -1339 6703 6618 288 0 0 0 chr5 37580488 37580520 -165505012 + (CA)n Simple_repeat Simple_repeat 1 32 0 955 203 57 33 chr5 37580921 37581133 -165504399 + MER20 DNA MER1_type 1 217 -2 210 208 0 0 chr5 37581541 37581594 -165503938 + (CA)n Simple_repeat Simple_repeat 2 54 0 183 319 28 28 chr5 37581815 37581887 -165503645 + L2 LINE L2 3173 3244 -28 210 37 0 0 chr5 37581892 37581919 -165503613 + (TC)n Simple_repeat Simple_repeat 1 27 0 596 312 28 37 chr5 37582538 37582756 -165502776 - MER58A DNA MER1_type -8 216 1 2144 127 0 6 chr5 37582796 37583110 -165502422 + AluSx SINE Alu 1 312 0 333 0 0 0 chr5 37583662 37583699 -165501833 + (CA)n Simple_repeat Simple_repeat 2 38 0 258 105 0 0 chr5 37585067 37585105 -165500427 + (TA)n Simple_repeat Simple_repeat 2 39 0 300 333 77 16 chr5 37585429 37585612 -165499920 + MIR SINE MIR 23 216 -46 23 54 0 0 chr5 37586624 37586661 -165498871 + AT_rich Low_complexity Low_complexity 1 37 0 2499 46 0 16 chr5 37586985 37587292 -165498240 + AluY SINE Alu 1 302 -9 26 30 0 0 chr5 37588478 37588511 -165497021 + AT_rich Low_complexity Low_complexity 1 33 0 180 176 0 0 chr5 37588609 37588643 -165496889 + (TA)n Simple_repeat Simple_repeat 2 35 0 26 50 0 0 chr5 37588954 37588994 -165496538 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 37590941 37590972 -165494560 + AT_rich Low_complexity Low_complexity 1 31 0 1276 247 29 14 chr5 37590979 37591327 -165494205 + L1PBa LINE L1 8 360 -6503 9774 170 101 8 chr5 37591388 37594535 -165490997 + L1PBa LINE L1 620 4057 -2805 377 57 38 0 chr5 37594545 37594598 -165490934 - MLT2A2 LTR ERVL 0 453 399 245 246 0 0 chr5 37594566 37594631 -165490901 - LTR66 LTR ERVL -152 458 394 * 335 227 31 52 chr5 37594631 37594728 -165490804 - L1MC4 LINE L1 -1339 6703 6609 24 32 0 0 chr5 37594734 37594765 -165490767 + AT_rich Low_complexity Low_complexity 1 31 0 2891 89 20 5 chr5 37594785 37595179 -165490353 - MLT2A1 LTR ERVL -44 400 1 41729 87 13 5 chr5 37595179 37600726 -165484806 - HERVL-A1 LTR ERVL 0 5654 63 7128 52 3 9 chr5 37600729 37602410 -165483122 + L1PA6 LINE L1 4470 6144 -10 1239 343 49 10 chr5 37602419 37603014 -165482518 - L2 LINE L2 -690 2624 2007 2108 92 0 83 chr5 37603026 37603351 -165482181 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 37603587 37603608 -165481924 + AT_rich Low_complexity Low_complexity 1 21 0 279 202 0 48 chr5 37603786 37603870 -165481662 - L1MC4 LINE L1 -1339 6703 6624 196 366 204 0 chr5 37604337 37604430 -165481102 - L2 LINE L2 -19 3253 3142 27 0 0 0 chr5 37604548 37604575 -165480957 + AT_rich Low_complexity Low_complexity 1 27 0 2164 118 3 0 chr5 37605041 37605338 -165480194 - AluSx SINE Alu -14 298 1 290 350 72 46 chr5 37605440 37605789 -165479743 + L2 LINE L2 2419 2776 -538 45 34 0 0 chr5 37606160 37606219 -165479313 + AT_rich Low_complexity Low_complexity 1 59 0 387 300 47 24 chr5 37606334 37606504 -165479028 + L1MEc LINE L1 1806 1979 -4417 394 288 39 27 chr5 37606617 37606876 -165478656 + L1MEc LINE L1 1958 2267 -3988 2733 255 28 77 chr5 37606886 37607977 -165477555 + L1ME2 LINE L1 321 1357 -5498 2029 264 50 7 chr5 37607979 37608725 -165476807 + L1ME2 LINE L1 1558 2326 -4633 1119 235 86 12 chr5 37608737 37609348 -165476184 + L1ME2 LINE L1 5780 6426 -569 516 266 107 19 chr5 37609374 37609645 -165475887 + L1M4 LINE L1 4590 4884 -1262 488 234 48 125 chr5 37609829 37610077 -165475455 + MLT1F1-int LTR MaLR 972 1200 -171 295 270 61 9 chr5 37610179 37610294 -165475238 + MLT1F1-int LTR MaLR 1249 1369 -2 1464 213 75 77 chr5 37610298 37610833 -165474699 + MLT1F1 LTR MaLR 3 538 -29 378 283 35 14 chr5 37610856 37611001 -165474531 + L1ME2 LINE L1 6659 6806 -169 1308 199 124 68 chr5 37611368 37611780 -165473752 + MLT1D LTR MaLR 21 455 -50 399 311 38 8 chr5 37611831 37611963 -165473569 - MIR SINE MIR -108 154 19 276 241 52 17 chr5 37613230 37613404 -165472128 + (TA)n Simple_repeat Simple_repeat 1 180 0 775 289 31 22 chr5 37613853 37614078 -165471454 - MIR SINE MIR -8 254 28 643 210 6 12 chr5 37614650 37614812 -165470720 - L1P LINE L1 -918 5228 5068 5627 207 18 8 chr5 37614843 37616960 -165468572 - L1PA15 LINE L1 -45 6120 4006 2139 116 0 3 chr5 37616960 37617252 -165468280 - AluSx SINE Alu -21 291 1 5627 207 18 8 chr5 37617252 37617563 -165467969 - L1PA15 LINE L1 -2159 4006 3700 207 69 0 0 chr5 37617567 37617596 -165467936 + (TTG)n Simple_repeat Simple_repeat 1 29 0 306 210 16 0 chr5 37617696 37617758 -165467774 + AluJ/FRAM SINE Alu 218 280 -22 260 26 0 26 chr5 37617760 37617798 -165467734 + (TTAAA)n Simple_repeat Simple_repeat 3 39 0 738 210 53 84 chr5 37617842 37617891 -165467641 + MLT1A1 LTR MaLR 112 161 -204 1425 197 44 0 chr5 37617891 37618186 -165467346 + AluSx SINE Alu 5 312 0 738 210 53 84 chr5 37618186 37618398 -165467134 + MLT1A1 LTR MaLR 161 365 0 1714 171 57 84 chr5 37618635 37619075 -165466457 - MSTA LTR MaLR 0 428 1 317 274 65 81 chr5 37619381 37619567 -165465965 + L1MEd LINE L1 833 1015 -5104 2105 126 0 0 chr5 37620357 37620650 -165464882 + AluSq SINE Alu 13 305 -8 620 296 38 10 chr5 37621165 37621456 -165464076 + L1MEd LINE L1 3197 3495 -2634 702 306 37 33 chr5 37621457 37621911 -165463621 + L1MEd LINE L1 3881 4336 -1793 21 36 0 0 chr5 37622391 37622419 -165463113 + AT_rich Low_complexity Low_complexity 1 28 0 295 318 85 8 chr5 37622435 37622564 -165462968 - MIR SINE MIR -77 185 47 284 308 26 0 chr5 37622999 37623077 -165462455 - MLT1J LTR MaLR -317 194 115 21 36 0 0 chr5 37624918 37624946 -165460586 + AT_rich Low_complexity Low_complexity 1 28 0 1710 154 58 28 chr5 37625426 37625790 -165459742 - THE1C LTR MaLR 0 375 1 280 344 45 25 chr5 37625948 37626105 -165459427 + MIR SINE MIR 11 170 -92 195 321 54 62 chr5 37626554 37626666 -165458866 + MIR SINE MIR 5 115 -147 268 248 248 0 chr5 37627260 37627361 -165458171 - MIR SINE MIR -13 249 124 1800 213 67 32 chr5 37628078 37628542 -165456990 + MER4E LTR ERV1 300 779 0 181 273 18 0 chr5 37628544 37628599 -165456933 + L2 LINE L2 3258 3313 0 210 174 0 43 chr5 37628671 37628717 -165456815 + L2 LINE L2 3257 3300 -13 2369 97 0 3 chr5 37628718 37629027 -165456505 + AluSp SINE Alu 1 308 -5 405 0 0 0 chr5 37629027 37629072 -165456460 + (TA)n Simple_repeat Simple_repeat 2 46 0 1745 111 12 4 chr5 37630554 37630806 -165454726 + AluSg SINE Alu 40 293 -17 279 161 0 0 chr5 37631153 37631209 -165454323 + (TA)n Simple_repeat Simple_repeat 1 56 0 258 369 34 13 chr5 37632134 37632283 -165453249 - L2 LINE L2 -941 2373 2222 441 0 0 0 chr5 37632456 37632505 -165453027 + (CA)n Simple_repeat Simple_repeat 2 50 0 2322 248 32 13 chr5 37633166 37633690 -165451842 + MLT2B3 LTR ERVL 1 534 -20 24 53 0 0 chr5 37635119 37635157 -165450375 + AT_rich Low_complexity Low_complexity 1 38 0 1390 234 132 55 chr5 37635272 37635742 -165449790 + MLT2B2 LTR ERVL 2 507 -8 1623 313 47 26 chr5 37635911 37636445 -165449087 + L1MDb LINE L1 7 551 -5858 3628 253 85 24 chr5 37636528 37638391 -165447141 + L1MDb LINE L1 668 2672 -3893 1571 275 66 48 chr5 37638380 37639165 -165446367 + L1M4 LINE L1 4075 4873 -1273 * 977 249 17 48 chr5 37639165 37639518 -165446014 + L1MD2 LINE L1 6016 6357 -2 22 56 0 0 chr5 37639864 37639900 -165445632 + AT_rich Low_complexity Low_complexity 1 36 0 761 231 6 0 chr5 37640042 37640202 -165445330 - L1MA10 LINE L1 -492 5820 5660 2002 191 47 61 chr5 37640202 37640549 -165444983 + L1MA10 LINE L1 5833 6172 -162 335 23 23 0 chr5 37640549 37640593 -165444939 + (CA)n Simple_repeat Simple_repeat 2 46 0 2002 191 47 61 chr5 37640593 37640754 -165444778 + L1MA10 LINE L1 6172 6334 0 233 259 89 54 chr5 37641021 37641133 -165444399 + HAL1 LINE L1 4 119 -2388 1412 165 31 4 chr5 37641973 37642227 -165443305 + AluSx SINE Alu 26 286 -26 440 285 34 50 chr5 37642541 37642720 -165442812 - MER5B DNA MER1_type 0 178 3 24 32 0 0 chr5 37643569 37643600 -165441932 + AT_rich Low_complexity Low_complexity 1 31 0 204 97 0 0 chr5 37643701 37643732 -165441800 + (TG)n Simple_repeat Simple_repeat 2 32 0 242 327 40 10 chr5 37644103 37644204 -165441328 + LTR67 LTR ERVL 440 543 -14 655 232 116 26 chr5 37644478 37644668 -165440864 - MER3 DNA MER1_type -2 207 1 2496 59 0 0 chr5 37644951 37645255 -165440277 + AluY SINE Alu 1 304 -7 1238 87 0 0 chr5 37645255 37645453 -165440079 + AluY SINE Alu 124 321 0 1568 183 3 11 chr5 37646064 37646349 -165439183 - AluJb SINE Alu -19 293 11 1068 157 81 157 chr5 37647987 37648234 -165437298 - MER7A DNA MER2_type -2733 305 90 1280 120 37 5 chr5 37648234 37648451 -165437081 + L1PA10 LINE L1 5944 6167 -1 1068 157 81 157 chr5 37648451 37648535 -165436997 - MER7A DNA MER2_type -2948 90 1 254 286 0 71 chr5 37649014 37649112 -165436420 + L2 LINE L2 3182 3272 0 225 151 0 0 chr5 37649399 37649452 -165436080 + A-rich Low_complexity Low_complexity 1 53 0 2150 117 0 19 chr5 37649658 37649974 -165435558 + AluSq SINE Alu 3 312 -1 22 0 0 0 chr5 37650131 37650153 -165435379 + AT_rich Low_complexity Low_complexity 1 22 0 403 316 100 60 chr5 37650202 37650548 -165434984 + L1MEd LINE L1 19 389 -5730 758 59 0 0 chr5 37650548 37650649 -165434883 + L1PA4 LINE L1 6050 6150 -5 403 316 100 60 chr5 37650649 37650754 -165434778 + L1MEd LINE L1 389 488 -5631 2077 113 0 3 chr5 37651159 37651484 -165434048 + AluSx SINE Alu 1 324 0 28 86 0 0 chr5 37651693 37651763 -165433769 + AT_rich Low_complexity Low_complexity 1 70 0 1961 162 0 0 chr5 37651852 37652330 -165433202 + AluSx SINE Alu 1 478 0 1332 246 22 33 chr5 37652331 37652693 -165432839 + MLT1B LTR MaLR 33 390 0 4480 70 50 2 chr5 37653783 37654385 -165431147 + L1PA7 LINE L1 5519 6149 -5 25 0 0 0 chr5 37655149 37655174 -165430358 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 37655207 37655232 -165430300 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 37655267 37655297 -165430235 + AT_rich Low_complexity Low_complexity 1 30 0 633 218 5 17 chr5 37655509 37655659 -165429873 - MER20 DNA MER1_type -5 214 65 280 241 17 0 chr5 37655875 37655933 -165429599 - MER20 DNA MER1_type -152 67 9 315 49 0 0 chr5 37655943 37655984 -165429548 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 37657806 37657834 -165427698 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 37657976 37658002 -165427530 + AT_rich Low_complexity Low_complexity 1 26 0 936 306 39 29 chr5 37658087 37658574 -165426958 + L1MC/D LINE L1 5262 5753 -2055 1262 266 24 3 chr5 37658876 37659210 -165426322 - MER58B DNA MER1_type 0 341 1 273 208 19 0 chr5 37659703 37659756 -165425776 - Tigger3(Golem) DNA MER2_type -2974 55 2 185 180 20 0 chr5 37659950 37660000 -165425532 + (TA)n Simple_repeat Simple_repeat 2 52 0 5085 265 58 63 chr5 37660240 37663309 -165422223 + L1PA13 LINE L1 2 3073 -3724 7722 76 6 20 chr5 37663348 37664421 -165421111 - MER11C LTR ERVK -14 1057 1 1449 289 14 2 chr5 37664421 37664908 -165420624 + L1 LINE L1 3068 3560 -3237 21 0 0 0 chr5 37664948 37664969 -165420563 + AT_rich Low_complexity Low_complexity 1 21 0 510 317 30 15 chr5 37665095 37665363 -165420169 + L1PA12 LINE L1 11 282 -7299 6312 252 18 18 chr5 37666613 37668978 -165416554 + L1PA12 LINE L1 2403 4772 -2812 4862 154 25 8 chr5 37669083 37669934 -165415598 + L1PA16 LINE L1 5293 6157 -9 14150 135 10 7 chr5 37670233 37672539 -165412993 - L1P LINE L1 -1032 5114 2802 4336 72 48 0 chr5 37672537 37673123 -165412409 + L1PA8A LINE L1 5490 6103 -28 * 25 0 0 0 chr5 37673808 37673833 -165411699 + AT_rich Low_complexity Low_complexity 1 25 0 2928 91 0 0 chr5 37673925 37674526 -165411006 - L1PA7 LINE L1 -589 5565 4965 4338 58 19 10 chr5 37674526 37675093 -165410439 + L1PA7 LINE L1 5566 6154 0 21 0 0 0 chr5 37675160 37675181 -165410351 + AT_rich Low_complexity Low_complexity 1 21 0 2104 86 3 58 chr5 37677646 37677971 -165407561 + AluY SINE Alu 1 307 -4 2043 143 3 0 chr5 37678090 37678397 -165407135 + AluSq SINE Alu 1 308 -5 251 378 45 19 chr5 37679004 37679160 -165406372 + MIR3 SINE MIR 23 182 -26 34 24 0 0 chr5 37679165 37679206 -165406326 + AT_rich Low_complexity Low_complexity 1 41 0 2115 158 11 13 chr5 37679915 37680289 -165405243 + THE1C LTR MaLR 3 375 0 8403 137 51 53 chr5 37680297 37681871 -165403661 + THE1C-int LTR MaLR 10 1580 0 1869 176 24 21 chr5 37681871 37682245 -165403287 + THE1C LTR MaLR 1 375 0 2382 279 66 28 chr5 37682871 37684161 -165401371 - L1 LINE L1 -3190 2780 1431 956 269 26 4 chr5 37684161 37684395 -165401137 - MER8 DNA MER2_type 0 239 1 2382 279 66 28 chr5 37684395 37685439 -165400093 - L1 LINE L1 -4539 1431 428 322 307 20 47 chr5 37685611 37685761 -165399771 - L1 LINE L1 -5497 394 249 894 324 30 30 chr5 37685866 37686233 -165399299 - L1 LINE L1 -5524 367 1 474 302 42 37 chr5 37686233 37686448 -165399084 - L2 LINE L2 -529 2785 2570 327 148 46 28 chr5 37686536 37686644 -165398888 + (TA)n Simple_repeat Simple_repeat 1 110 0 336 327 67 22 chr5 37686818 37687130 -165398402 - L2 LINE L2 -1005 2309 1984 306 333 0 0 chr5 37687253 37687343 -165398189 + L1MC4 LINE L1 6614 6703 -1339 301 303 0 0 chr5 37687297 37687386 -165398146 - L1MC4 LINE L1 -1339 6703 6615 * 182 180 16 0 chr5 37688955 37689016 -165396516 + A-rich Low_complexity Low_complexity 3 64 0 240 35 0 0 chr5 37689318 37689347 -165396185 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 258 61 98 chr5 37689745 37689877 -165395655 + MIR SINE MIR 28 154 -108 1072 248 33 51 chr5 37690646 37691041 -165394491 - MLT1B LTR MaLR 0 390 3 545 326 53 28 chr5 37691717 37692002 -165393530 + L1MC4a LINE L1 5364 5655 -2153 255 291 227 0 chr5 37692192 37692333 -165393199 + L1MC4a LINE L1 5748 5920 -1888 26 30 0 0 chr5 37692333 37692366 -165393166 + AT_rich Low_complexity Low_complexity 1 33 0 1536 138 10 51 chr5 37692367 37692678 -165392854 - L1MA3 LINE L1 -208 6097 5800 183 298 0 0 chr5 37692847 37692894 -165392638 - L3 LINE CR1 -4 1573 1527 537 271 53 0 chr5 37693739 37693872 -165391660 + MER5A DNA MER1_type 27 166 -23 1342 240 80 15 chr5 37694116 37694453 -165391079 + MLT1B LTR MaLR 32 390 0 1683 167 3 37 chr5 37694520 37694843 -165390689 + AluJo SINE Alu 1 312 0 313 329 56 12 chr5 37694925 37695086 -165390446 + MIR SINE MIR 66 233 -29 1190 140 78 26 chr5 37695679 37695977 -165389555 - MER4E LTR ERV1 -141 638 273 587 207 6 55 chr5 37696551 37696670 -165388862 - L1MA10 LINE L1 -7 6327 6217 4571 141 89 6 chr5 37696670 37697501 -165388031 + MER4D LTR ERV1 1 900 -3 587 207 6 55 chr5 37697501 37697545 -165387987 - L1MA10 LINE L1 -117 6217 6172 360 0 0 0 chr5 37697568 37697608 -165387924 + (TG)n Simple_repeat Simple_repeat 2 41 0 204 255 0 0 chr5 37697983 37698030 -165387502 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 37698290 37698311 -165387221 + AT_rich Low_complexity Low_complexity 1 21 0 1029 319 143 31 chr5 37698891 37699641 -165385891 - L2 LINE L2 -337 2977 2144 1731 223 53 65 chr5 37700393 37700944 -165384588 - MER74A LTR ERVL -14 544 1 332 346 129 38 chr5 37700944 37701207 -165384325 - MER45C DNA AcHobo -333 620 334 580 303 52 58 chr5 37701266 37701480 -165384052 - MER45C DNA AcHobo -606 347 134 5565 25 0 3 chr5 37701480 37702131 -165383401 + L1PA3 LINE L1 5507 6155 0 580 303 52 58 chr5 37702131 37702246 -165383286 - MER45C DNA AcHobo -819 134 20 219 320 0 13 chr5 37702806 37702884 -165382648 + MIR SINE MIR 169 245 -17 2216 97 0 0 chr5 37704403 37704691 -165380841 + AluSg1 SINE Alu 1 288 -21 2152 103 78 6 chr5 37705352 37705700 -165379832 + THE1C LTR MaLR 1 373 -2 393 324 139 6 chr5 37708517 37708690 -165376842 - MIR SINE MIR -5 257 62 614 304 88 5 chr5 37709197 37709401 -165376131 - MLT1J2 LTR MaLR -131 319 99 1036 230 62 60 chr5 37709841 37710370 -165375162 + MLT1E LTR MaLR 51 593 0 23 0 0 0 chr5 37710981 37711004 -165374528 + AT_rich Low_complexity Low_complexity 1 23 0 2127 108 3 3 chr5 37711204 37711501 -165374031 - AluSx SINE Alu -15 297 1 327 309 43 25 chr5 37711580 37711742 -165373790 + Charlie8 DNA MER1_type 7 171 -2246 334 261 304 0 chr5 37712510 37712648 -165372884 - MER5A DNA MER1_type -9 180 1 609 92 0 0 chr5 37712949 37713047 -165372485 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 21 36 0 0 chr5 37713152 37713180 -165372352 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 37713406 37713429 -165372103 + AT_rich Low_complexity Low_complexity 1 23 0 818 289 150 11 chr5 37714331 37714691 -165370841 + MLT1J2 LTR MaLR 4 413 -37 268 309 15 0 chr5 37715458 37715526 -165370006 + MIR SINE MIR 194 262 0 283 370 11 54 chr5 37716118 37716302 -165369230 - MIR SINE MIR -21 241 66 26 30 0 0 chr5 37716587 37716620 -165368912 + AT_rich Low_complexity Low_complexity 1 33 0 198 341 23 23 chr5 37717008 37717096 -165368436 + MIR SINE MIR 52 139 -123 834 239 60 98 chr5 37718718 37719065 -165366467 + LTR37B LTR ERV1 6 334 -134 2080 127 10 0 chr5 37719065 37719364 -165366168 - AluSq SINE Alu -11 302 1 834 239 60 98 chr5 37719364 37719467 -165366065 + LTR37B LTR ERV1 334 439 -29 304 333 26 17 chr5 37720668 37720785 -165364747 + MER5A DNA MER1_type 63 180 -9 459 349 26 5 chr5 37722680 37722872 -165362660 + MIR SINE MIR 6 201 -61 932 174 0 13 chr5 37723140 37723295 -165362237 - AluJo SINE Alu -33 279 127 951 173 106 16 chr5 37723295 37723549 -165361983 + Charlie1 DNA MER1_type 2485 2761 0 347 328 49 16 chr5 37724181 37724364 -165361168 - L1ME3A LINE L1 -4 6166 5978 477 304 29 42 chr5 37724381 37724693 -165360839 - L1ME3A LINE L1 -238 5932 5625 180 97 0 0 chr5 37724698 37724729 -165360803 + (T)n Simple_repeat Simple_repeat 1 31 0 1361 276 62 74 chr5 37724827 37725132 -165360400 - L1ME3A LINE L1 -825 5321 5014 1350 221 3 13 chr5 37725132 37725430 -165360102 - AluJo SINE Alu -15 297 3 1361 276 62 74 chr5 37725430 37726429 -165359103 - L1ME3A LINE L1 -1132 5014 4032 1657 198 21 3 chr5 37726479 37726807 -165358725 + MER2 DNA MER2_type 7 340 -5 281 343 84 3 chr5 37726808 37727105 -165358427 - L1ME3A LINE L1 -2167 3979 3659 21 0 0 0 chr5 37727284 37727305 -165358227 + AT_rich Low_complexity Low_complexity 1 21 0 1595 210 121 7 chr5 37727555 37728008 -165357524 - MLT1D LTR MaLR 0 505 1 1601 103 0 0 chr5 37728157 37728370 -165357162 - AluSg/x SINE Alu -14 298 86 204 312 128 43 chr5 37729139 37729280 -165356252 + L3 LINE CR1 1416 1568 -9 805 234 83 40 chr5 37730059 37730517 -165355015 + MLT1F1 LTR MaLR 7 549 -18 779 200 25 15 chr5 37730517 37730717 -165354815 + MLT1A1 LTR MaLR 1 202 -163 235 252 14 0 chr5 37730956 37731099 -165354433 + (TA)n Simple_repeat Simple_repeat 2 146 0 360 125 0 0 chr5 37731107 37731169 -165354363 + MLT2B3 LTR ERVL 403 554 0 181 309 0 0 chr5 37731239 37731281 -165354251 - MIR SINE MIR -218 44 3 235 307 0 0 chr5 37731564 37731652 -165353880 - L1MC4 LINE L1 -1340 6702 6615 252 177 0 97 chr5 37731675 37731737 -165353795 + MLT2B1 LTR ERVL 465 520 0 591 195 9 18 chr5 37732124 37732237 -165353295 - MER45 DNA AcHobo -1468 113 2 241 389 50 27 chr5 37732795 37733055 -165352477 - L2 LINE L2 -840 2474 2209 255 289 0 24 chr5 37733137 37733220 -165352312 + GA-rich Low_complexity Low_complexity 2 82 0 221 0 35 0 chr5 37734345 37734374 -165351158 + (GAA)n Simple_repeat Simple_repeat 2 31 0 44 63 0 0 chr5 37734753 37734832 -165350700 + AT_rich Low_complexity Low_complexity 1 79 0 37 0 0 0 chr5 37734984 37735021 -165350511 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr5 37735030 37735063 -165350469 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 37735325 37735346 -165350186 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 37735395 37735417 -165350115 + (T)n Simple_repeat Simple_repeat 1 22 0 1889 141 20 0 chr5 37735769 37736106 -165349426 + AluSx SINE Alu 1 343 0 520 126 0 29 chr5 37736107 37736210 -165349322 + (GGGAA)n Simple_repeat Simple_repeat 5 104 0 315 239 0 0 chr5 37736664 37736731 -165348801 + MLT1A1 LTR MaLR 296 362 -3 195 42 0 0 chr5 37737039 37737063 -165348469 + (TC)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 37737994 37738017 -165347515 + AT_rich Low_complexity Low_complexity 1 23 0 2126 260 29 94 chr5 37739464 37740313 -165345219 + MER21B LTR ERV1 13 806 -57 2221 107 0 0 chr5 37741222 37741522 -165344010 - AluSg SINE Alu -10 300 1 252 0 0 0 chr5 37741604 37741632 -165343900 + (CA)n Simple_repeat Simple_repeat 1 28 0 719 126 42 21 chr5 37742001 37742144 -165343388 - L1MA9 LINE L1 -6 6306 6161 2258 69 3 50 chr5 37742412 37742729 -165342803 + AluY SINE Alu 4 305 -6 285 372 122 21 chr5 37743659 37744084 -165341448 + L3 LINE CR1 584 1051 -526 216 0 0 0 chr5 37744616 37744640 -165340892 + (TA)n Simple_repeat Simple_repeat 1 24 0 207 0 0 0 chr5 37744639 37744662 -165340870 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 1400 201 80 6 chr5 37744662 37745044 -165340488 - MLT2B1 LTR ERVL -53 467 2 189 0 0 0 chr5 37745386 37745407 -165340125 + (A)n Simple_repeat Simple_repeat 1 21 0 303 293 100 35 chr5 37746036 37746295 -165339237 - L1ME4a LINE L1 -245 5876 5601 21 0 0 0 chr5 37746851 37746872 -165338660 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 37746971 37747000 -165338532 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 37747692 37747716 -165337816 + AT_rich Low_complexity Low_complexity 1 24 0 195 283 145 71 chr5 37747716 37747999 -165337533 - L2 LINE L2 -797 2517 2214 249 33 0 0 chr5 37748616 37748646 -165336886 + (CA)n Simple_repeat Simple_repeat 2 31 0 2012 125 3 10 chr5 37748718 37749006 -165336526 + AluSq SINE Alu 3 288 -25 243 218 0 0 chr5 37749130 37749185 -165336347 + (TA)n Simple_repeat Simple_repeat 1 55 0 375 23 0 0 chr5 37749185 37749229 -165336303 + (CA)n Simple_repeat Simple_repeat 2 45 0 1554 148 41 0 chr5 37749236 37749506 -165336026 + Tigger3(Golem) DNA MER2_type 2148 2428 -601 263 340 0 0 chr5 37749608 37749714 -165335818 + G-rich Low_complexity Low_complexity 1 106 0 895 265 123 19 chr5 37749827 37750186 -165335346 + L1MD2 LINE L1 5714 6109 -250 1078 281 109 38 chr5 37750186 37750318 -165335214 + MLT1D LTR MaLR 2 123 -382 1958 131 33 7 chr5 37750318 37750623 -165334909 + AluSq SINE Alu 1 313 0 1078 281 109 38 chr5 37750623 37750939 -165334593 + MLT1D LTR MaLR 123 482 -23 990 212 19 35 chr5 37750945 37751204 -165334328 + L1MD2 LINE L1 6104 6358 -1 1922 293 75 19 chr5 37751223 37752277 -165333255 + L1ME3A LINE L1 5038 6157 -13 4164 187 36 23 chr5 37753194 37753617 -165331915 + L1MB1 LINE L1 5032 5448 -720 2249 97 0 0 chr5 37753617 37753915 -165331617 + AluSx SINE Alu 1 298 -14 4164 187 36 23 chr5 37753915 37754607 -165330925 + L1MB1 LINE L1 5448 6163 -5 1597 159 91 14 chr5 37754616 37754967 -165330565 + L1MA6 LINE L1 5866 6243 -57 302 77 0 0 chr5 37754967 37755006 -165330526 + L1MA6 LINE L1 6205 6243 -57 364 198 35 0 chr5 37755009 37755095 -165330437 + L1MA6 LINE L1 6208 6296 -4 24 0 0 0 chr5 37755787 37755811 -165329721 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 37756205 37756227 -165329305 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr5 37756387 37756426 -165329106 + AT_rich Low_complexity Low_complexity 1 39 0 894 246 84 78 chr5 37756686 37757173 -165328359 + MLT1F1 LTR MaLR 3 492 -75 1680 180 14 34 chr5 37758347 37758697 -165326835 + MER7A DNA MER2_type 1 341 -5 363 23 0 0 chr5 37758808 37758852 -165326680 + (TC)n Simple_repeat Simple_repeat 2 45 0 28 0 0 0 chr5 37759326 37759354 -165326178 + AT_rich Low_complexity Low_complexity 1 28 0 226 240 62 31 chr5 37760609 37760705 -165324827 + MER112 DNA MER1_type 66 164 -96 234 139 10 50 chr5 37760974 37761075 -165324457 + (TA)n Simple_repeat Simple_repeat 1 97 0 32 0 0 0 chr5 37761356 37761388 -165324144 + AT_rich Low_complexity Low_complexity 1 32 0 30 69 0 0 chr5 37763179 37763237 -165322295 + AT_rich Low_complexity Low_complexity 1 58 0 239 366 79 6 chr5 37763266 37763430 -165322102 + L2 LINE L2 2530 2705 -609 435 310 48 48 chr5 37763632 37763900 -165321632 + L2 LINE L2 2991 3258 -55 1952 185 29 0 chr5 37763991 37764337 -165321195 + MLT1A1 LTR MaLR 10 365 0 1692 180 0 22 chr5 37764469 37764780 -165320752 + AluJo SINE Alu 1 304 -8 207 373 56 32 chr5 37766709 37766835 -165318697 - MIR SINE MIR -129 133 5 24 32 0 0 chr5 37767347 37767378 -165318154 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 37767751 37767772 -165317760 + AT_rich Low_complexity Low_complexity 1 21 0 430 323 89 21 chr5 37768233 37768515 -165317017 + L1MDa LINE L1 35 335 -6205 330 26 0 0 chr5 37768935 37768974 -165316558 + (TG)n Simple_repeat Simple_repeat 2 40 0 678 222 54 68 chr5 37770579 37770800 -165314732 - MER20 DNA MER1_type -1 218 1 26 0 0 0 chr5 37771179 37771205 -165314327 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 37771852 37771874 -165313658 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 37771944 37771965 -165313567 + AT_rich Low_complexity Low_complexity 1 21 0 31 44 0 0 chr5 37772069 37772114 -165313418 + AT_rich Low_complexity Low_complexity 1 45 0 255 321 93 56 chr5 37773737 37773952 -165311580 + MIR SINE MIR 29 251 -11 192 40 0 0 chr5 37774690 37774715 -165310817 + (TG)n Simple_repeat Simple_repeat 2 26 0 273 345 65 65 chr5 37774768 37775011 -165310521 + L2 LINE L2 1163 1409 -1905 2198 39 14 21 chr5 37775011 37775337 -165310195 + AluY SINE Alu 1 324 0 273 345 65 65 chr5 37775337 37775478 -165310054 + L2 LINE L2 1408 1548 -1766 266 297 65 65 chr5 37776511 37776774 -165308758 + HAL1 LINE L1 1405 1667 -840 306 0 0 0 chr5 37776813 37776847 -165308685 + (CA)n Simple_repeat Simple_repeat 2 35 0 364 169 45 0 chr5 37776945 37777034 -165308498 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 22 35 0 0 chr5 37777737 37777766 -165307766 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 37778441 37778469 -165307063 + AT_rich Low_complexity Low_complexity 1 28 0 2064 104 38 0 chr5 37778598 37778886 -165306646 - AluY SINE Alu -12 299 1 23 33 0 0 chr5 37779112 37779142 -165306390 + AT_rich Low_complexity Low_complexity 1 30 0 386 344 38 6 chr5 37779801 37779961 -165305571 - L2 LINE L2 -296 3017 2853 873 231 165 42 chr5 37779961 37780284 -165305248 + MLT1A1 LTR MaLR 1 424 -2 1410 316 70 33 chr5 37780297 37781124 -165304408 - L2 LINE L2 -467 2847 1990 2576 175 10 0 chr5 37781327 37781835 -165303697 - L1 LINE L1 -1639 4507 3995 288 0 0 0 chr5 37782401 37782433 -165303099 + (CA)n Simple_repeat Simple_repeat 2 33 0 1642 214 63 41 chr5 37782670 37783160 -165302372 + MLT1D LTR MaLR 3 503 -2 222 91 0 0 chr5 37785247 37785280 -165300252 + (TG)n Simple_repeat Simple_repeat 2 34 0 183 309 27 45 chr5 37786642 37786752 -165298780 - MIR SINE MIR -97 165 58 1825 120 49 0 chr5 37787105 37787371 -165298161 - AluSx SINE Alu -5 307 29 421 367 146 27 chr5 37787442 37787957 -165297575 + L2 LINE L2 2402 2977 -337 229 346 0 0 chr5 37788916 37788997 -165296535 + CT-rich Low_complexity Low_complexity 1 81 0 220 320 69 40 chr5 37789986 37790161 -165295371 + MIR SINE MIR 9 188 -74 441 261 35 74 chr5 37790619 37790902 -165294630 - L1ME3A LINE L1 -166 6004 5733 23 0 0 0 chr5 37790921 37790944 -165294588 + AT_rich Low_complexity Low_complexity 1 23 0 235 218 73 0 chr5 37790965 37791020 -165294512 + L1ME LINE L1 5731 5789 -381 919 248 103 0 chr5 37791070 37791332 -165294200 - L1ME3A LINE L1 -448 5722 5434 1730 106 23 8 chr5 37792060 37792325 -165293207 - L1PA13 LINE L1 0 6163 5895 27 92 0 0 chr5 37793096 37793172 -165292360 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr5 37793562 37793591 -165291941 + AT_rich Low_complexity Low_complexity 1 29 0 34 42 0 0 chr5 37793661 37793709 -165291823 + AT_rich Low_complexity Low_complexity 1 48 0 9682 111 30 2 chr5 37794060 37796197 -165289335 - L1PA3 LINE L1 0 6155 3982 182 194 0 0 chr5 37796449 37796485 -165289047 + L2 LINE L2 3217 3252 -20 250 296 0 0 chr5 37798086 37798157 -165287375 + CT-rich Low_complexity Low_complexity 1 71 0 25 0 0 0 chr5 37798670 37798695 -165286837 + AT_rich Low_complexity Low_complexity 1 25 0 365 309 111 10 chr5 37798977 37799184 -165286348 - L1ME LINE L1 -331 5790 5563 807 188 7 0 chr5 37799204 37799353 -165286179 - AluJb SINE Alu -2 310 161 1245 147 0 76 chr5 37799353 37799577 -165285955 - AluJb SINE Alu -101 211 5 1218 157 9 26 chr5 37799790 37800020 -165285512 + THE1C LTR MaLR 1 226 -149 803 146 35 64 chr5 37800130 37800246 -165285286 + THE1C LTR MaLR 210 321 -54 2537 98 0 46 chr5 37800246 37800635 -165284897 - THE1C LTR MaLR -2 373 3 803 146 35 64 chr5 37800635 37800689 -165284843 + THE1C LTR MaLR 321 375 0 1893 135 31 7 chr5 37801223 37801512 -165284020 - AluSq SINE Alu -17 296 1 195 100 0 0 chr5 37801602 37801632 -165283900 + (T)n Simple_repeat Simple_repeat 1 30 0 1746 132 9 64 chr5 37802513 37802594 -165282938 + Tigger3(Golem) DNA MER2_type 1 85 -1146 2255 76 7 20 chr5 37802594 37802898 -165282634 + AluSg SINE Alu 1 300 -10 1746 132 9 64 chr5 37802898 37803142 -165282390 + Tigger3(Golem) DNA MER2_type 85 308 -923 207 256 0 0 chr5 37803148 37803191 -165282341 + (TG)n Simple_repeat Simple_repeat 1 43 0 241 279 23 0 chr5 37803191 37803277 -165282255 - L1MC4 LINE L1 -1340 6702 6615 214 211 0 0 chr5 37803281 37803319 -165282213 + (TA)n Simple_repeat Simple_repeat 1 38 0 2346 247 97 34 chr5 37803911 37805295 -165280237 + L1MD2 LINE L1 647 2112 -4294 2407 215 35 15 chr5 37805345 37806000 -165279532 + L1MD2 LINE L1 3780 4447 -1959 2186 237 79 23 chr5 37806013 37806177 -165279355 + L1MD2 LINE L1 5227 5380 -1239 1659 147 12 77 chr5 37806177 37806503 -165279029 + AluSx SINE Alu 1 305 -7 2186 237 79 23 chr5 37806503 37807187 -165278345 + L1MD2 LINE L1 5380 6130 -489 957 239 76 40 chr5 37807262 37807563 -165277969 + L1MD2 LINE L1 6293 6604 -15 1195 122 17 0 chr5 37808520 37808701 -165276831 + L1PB1 LINE L1 5608 5791 -360 205 125 21 21 chr5 37808769 37808817 -165276715 + (TA)n Simple_repeat Simple_repeat 2 49 0 2327 123 6 3 chr5 37808882 37809239 -165276293 + L1PB1 LINE L1 5787 6144 -7 2012 137 3 3 chr5 37810758 37811065 -165274467 - AluY SINE Alu -4 307 1 24 0 0 0 chr5 37811926 37811950 -165273582 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 37812183 37812209 -165273323 + AT_rich Low_complexity Low_complexity 1 26 0 217 228 18 0 chr5 37813454 37813511 -165272021 + (CA)n Simple_repeat Simple_repeat 1 58 0 2336 136 22 3 chr5 37813640 37814008 -165271524 + THE1C LTR MaLR 1 375 0 317 246 48 12 chr5 37816007 37816174 -165269358 + (TA)n Simple_repeat Simple_repeat 1 173 0 369 293 75 15 chr5 37816927 37817060 -165268472 + MLT1J1 LTR MaLR 193 333 -113 189 0 0 0 chr5 37817196 37817217 -165268315 + (A)n Simple_repeat Simple_repeat 1 21 0 256 286 29 0 chr5 37817341 37817411 -165268121 + L2 LINE L2 3201 3272 0 237 336 0 26 chr5 37817880 37817996 -165267536 + GA-rich Low_complexity Low_complexity 4 116 0 30 27 0 0 chr5 37818095 37818132 -165267400 + AT_rich Low_complexity Low_complexity 1 37 0 3226 169 64 3 chr5 37818521 37819159 -165266373 - Tigger3(Golem) DNA MER2_type 0 3029 2353 408 250 52 15 chr5 37819346 37819482 -165266050 + Charlie1 DNA MER1_type 2621 2761 0 1283 267 59 24 chr5 37820504 37820973 -165264559 + MLT1G LTR MaLR 35 588 -2 1602 162 40 0 chr5 37821872 37822171 -165263361 + AluSx SINE Alu 1 310 0 931 186 104 0 chr5 37822433 37822654 -165262878 - Tigger2 DNA MER2_type 0 2718 2475 3549 166 45 31 chr5 37822723 37823004 -165262528 - Tigger2 DNA MER2_type -1971 747 471 1816 123 8 0 chr5 37823004 37823264 -165262268 - AluSg1 SINE Alu -8 301 40 3549 166 45 31 chr5 37823264 37823719 -165261813 - Tigger2 DNA MER2_type -2247 471 1 189 159 0 0 chr5 37824347 37824391 -165261141 + (TA)n Simple_repeat Simple_repeat 1 44 0 582 208 30 42 chr5 37824668 37824836 -165260696 - LTR40a LTR ERVL -1 518 353 389 276 172 23 chr5 37824837 37825011 -165260521 - MIR SINE MIR -61 201 2 467 229 37 0 chr5 37826319 37826428 -165259104 - MIR SINE MIR -37 225 113 569 342 7 48 chr5 37827530 37827802 -165257730 - MIR SINE MIR 0 262 2 2227 301 96 75 chr5 37829911 37831532 -165254000 + L2 LINE L2 690 2344 -970 214 339 59 17 chr5 37831975 37832093 -165253439 + MIR3 SINE MIR 55 177 -31 32 0 0 0 chr5 37832776 37832808 -165252724 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 37832863 37832886 -165252646 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 37834180 37834201 -165251331 + AT_rich Low_complexity Low_complexity 1 21 0 1768 162 59 0 chr5 37834652 37834992 -165250540 - MER46B DNA MER2_type -1 235 1 21 0 0 0 chr5 37836143 37836164 -165249368 + AT_rich Low_complexity Low_complexity 1 21 0 1970 112 49 0 chr5 37836676 37836962 -165248570 - AluSx SINE Alu -12 300 1 23 0 0 0 chr5 37836999 37837022 -165248510 + AT_rich Low_complexity Low_complexity 1 23 0 229 343 99 95 chr5 37838070 37838502 -165247030 - L2 LINE L2 -2 3270 2837 1152 259 29 26 chr5 37838823 37839174 -165246358 + MLT1A2 LTR MaLR 23 374 0 246 386 64 37 chr5 37839348 37839832 -165245700 - L2 LINE L2 -980 2334 1838 191 188 0 47 chr5 37841901 37841965 -165243567 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 1091 96 19 201 chr5 37842714 37843028 -165242504 - Tigger2 DNA MER2_type -1 2717 2461 213 226 0 0 chr5 37843128 37843181 -165242351 + T-rich Low_complexity Low_complexity 1 53 0 209 243 108 0 chr5 37843358 37843432 -165242100 + L2 LINE L2 2410 2491 -823 675 290 123 53 chr5 37843432 37844077 -165241455 + L2 LINE L2 2618 3309 -4 215 368 61 0 chr5 37844060 37844174 -165241358 - L3 LINE CR1 -729 848 728 * 2119 40 0 0 chr5 37845796 37846047 -165239485 - AluY SINE Alu -17 294 44 349 290 99 83 chr5 37847158 37847482 -165238050 + L1M2 LINE L1 799 1127 -5722 288 0 0 0 chr5 37848527 37848559 -165236973 + (TG)n Simple_repeat Simple_repeat 2 33 0 1279 146 135 22 chr5 37848601 37848875 -165236657 - AluSx SINE Alu -7 305 1 522 366 160 13 chr5 37848901 37849352 -165236180 + L2 LINE L2 1851 2367 -947 1164 188 13 4 chr5 37849493 37849727 -165235805 - L1P LINE L1 -1664 4482 4247 398 222 65 81 chr5 37849941 37850126 -165235406 + MIR SINE MIR 66 247 -15 2667 170 12 12 chr5 37851672 37852184 -165233348 - L1PA13 LINE L1 0 6163 5652 1161 148 27 0 chr5 37853960 37854143 -165231389 - MER58B DNA MER1_type 0 341 154 1481 128 144 109 chr5 37854250 37854618 -165230914 - MSTA LTR MaLR -47 381 1 8158 176 6 45 chr5 37854618 37856260 -165229272 - MSTA-int LTR MaLR 0 1580 3 1936 153 137 8 chr5 37856262 37856641 -165228891 - MSTA LTR MaLR 0 428 1 2526 39 0 10 chr5 37856922 37857229 -165228303 + AluY SINE Alu 1 304 -7 22 35 0 0 chr5 37858888 37858917 -165226615 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 37858947 37858970 -165226562 + AT_rich Low_complexity Low_complexity 1 23 0 304 337 46 40 chr5 37859777 37859952 -165225580 + MIR SINE MIR 28 203 -59 1922 102 11 0 chr5 37860266 37860531 -165225001 + AluY SINE Alu 44 311 0 31 26 0 0 chr5 37860548 37860586 -165224946 + AT_rich Low_complexity Low_complexity 1 38 0 213 320 13 115 chr5 37861014 37861170 -165224362 - MIR SINE MIR -9 253 114 412 136 0 0 chr5 37861664 37861730 -165223802 + MADE1 DNA Mariner 13 78 -2 180 111 0 0 chr5 37863285 37863312 -165222220 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2402 129 17 21 chr5 37864797 37865216 -165220316 - L1PA12 LINE L1 -7 6161 5745 228 220 17 0 chr5 37865216 37865275 -165220257 - L1P LINE L1 -1623 4523 4464 773 78 0 0 chr5 37865384 37865487 -165220045 - L1PA11 LINE L1 -327 5847 5745 * 817 229 0 19 chr5 37865484 37865694 -165219838 - L1 LINE L1 -1620 4526 4321 * 7014 163 26 17 chr5 37865692 37867017 -165218515 + L1P LINE L1 3145 4482 -1664 310 283 79 7 chr5 37867159 37867311 -165218221 - L2 LINE L2 -947 2367 2205 1200 219 78 12 chr5 37869476 37869796 -165215736 + MER58B DNA MER1_type 1 341 0 401 270 92 29 chr5 37870328 37870502 -165215030 - L1MEd LINE L1 -5354 765 581 30 59 0 0 chr5 37871070 37871121 -165214411 + AT_rich Low_complexity Low_complexity 1 51 0 202 88 29 0 chr5 37871149 37871183 -165214349 + (TA)n Simple_repeat Simple_repeat 2 36 0 202 194 28 0 chr5 37871350 37871422 -165214110 + (TA)n Simple_repeat Simple_repeat 1 74 0 1944 128 7 0 chr5 37871439 37871720 -165213812 + AluSq SINE Alu 1 313 0 271 0 0 0 chr5 37871720 37871750 -165213782 + (TAAA)n Simple_repeat Simple_repeat 1 140 0 310 244 117 31 chr5 37871835 37872126 -165213406 - L1MC5 LINE L1 -195 7766 7451 471 152 0 0 chr5 37873221 37873313 -165212219 - L1MB3 LINE L1 -3 6180 6089 455 226 10 0 chr5 37873325 37873427 -165212105 + FLAM_A SINE Alu 12 114 -28 315 113 0 0 chr5 37873427 37873480 -165212052 + (CA)n Simple_repeat Simple_repeat 1 53 0 287 242 99 0 chr5 37873481 37873572 -165211960 - L1MB3 LINE L1 -80 6103 6004 3278 101 0 4 chr5 37874489 37874958 -165210574 - L1P LINE L1 -1296 4850 4382 4475 57 3 7 chr5 37874958 37875701 -165209831 + L1PA7 LINE L1 5565 6315 0 620 142 21 21 chr5 37875711 37875852 -165209680 + GA-rich Low_complexity Low_complexity 4 144 0 246 239 47 47 chr5 37876017 37876230 -165209302 + L1ME LINE L1 801 1013 -5057 342 0 0 0 chr5 37876537 37876575 -165208957 + (TG)n Simple_repeat Simple_repeat 2 39 0 2024 113 0 33 chr5 37877771 37878073 -165207459 + AluSg SINE Alu 6 297 -13 594 111 44 0 chr5 37878221 37878311 -165207221 + Tigger3(Golem) DNA MER2_type 2800 2893 -136 407 253 23 0 chr5 37878330 37878504 -165207028 + (TA)n Simple_repeat Simple_repeat 1 178 0 189 339 123 0 chr5 37878666 37878796 -165206736 + MIR SINE MIR 34 179 -83 235 351 39 29 chr5 37878937 37879145 -165206387 + L2 LINE L2 2878 3087 -226 1987 142 7 0 chr5 37879314 37879609 -165205923 - AluSq SINE Alu -15 298 2 1920 210 50 17 chr5 37879785 37880247 -165205285 - L1MB4 LINE L1 -52 6128 5652 379 301 20 55 chr5 37880571 37880770 -165204762 + LTR33 LTR ERVL 330 521 0 2220 58 27 7 chr5 37881404 37881697 -165203835 - AluY SINE Alu -12 299 1 1094 189 16 0 chr5 37881860 37882050 -165203482 - MLT1B LTR MaLR -6 384 192 1212 52 0 0 chr5 37882091 37882245 -165203287 - L1PA4 LINE L1 -3 6152 5999 327 255 1 61 chr5 37882246 37882362 -165203170 - MLT1B LTR MaLR -164 226 125 1817 116 0 4 chr5 37883462 37883713 -165201819 + AluSx SINE Alu 2 251 -61 350 301 44 7 chr5 37884419 37884555 -165200977 + MLT1J2 LTR MaLR 8 148 -302 255 125 0 0 chr5 37884561 37884601 -165200931 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 2263 86 20 0 chr5 37884601 37884904 -165200628 - AluSc SINE Alu 0 309 1 271 89 0 67 chr5 37885598 37885643 -165199889 + AluSp/q SINE Alu 162 203 -100 921 84 0 0 chr5 37885655 37885802 -165199730 + AluSc SINE Alu 163 309 0 283 282 82 9 chr5 37886592 37886702 -165198830 - MARNA DNA Mariner -342 244 127 408 325 113 22 chr5 37887217 37887491 -165198041 - L2 LINE L2 -1102 2212 1914 1488 242 18 45 chr5 37887923 37888191 -165197341 - MLT1A2 LTR MaLR -1 373 116 2303 91 0 0 chr5 37888191 37888478 -165197054 - AluSc SINE Alu -3 306 20 1488 242 18 45 chr5 37888478 37888589 -165196943 - MLT1A2 LTR MaLR -258 116 4 488 127 13 0 chr5 37888892 37888971 -165196561 - MADE1 DNA Mariner 0 80 1 1677 114 4 30 chr5 37889186 37889449 -165196083 + AluSx SINE Alu 40 295 -17 336 24 0 0 chr5 37889930 37889971 -165195561 + (TG)n Simple_repeat Simple_repeat 2 42 0 1153 135 23 37 chr5 37891651 37891866 -165193666 + L1PA13 LINE L1 5944 6155 -8 267 285 16 24 chr5 37892343 37892466 -165193066 + HAL1 LINE L1 2228 2349 -158 21 0 0 0 chr5 37893790 37893811 -165191721 + AT_rich Low_complexity Low_complexity 1 21 0 303 154 0 0 chr5 37894874 37894939 -165190593 + T-rich Low_complexity Low_complexity 1 65 0 2384 59 7 7 chr5 37895116 37895419 -165190113 - AluY SINE Alu -8 303 1 273 411 0 0 chr5 37895509 37895621 -165189911 + L2 LINE L2 3190 3301 -12 194 289 114 61 chr5 37895904 37896018 -165189514 - L2 LINE L2 -1 3312 3193 527 83 0 0 chr5 37897337 37897409 -165188123 - L1P LINE L1 -2590 3556 3485 336 284 8 16 chr5 37897560 37897687 -165187845 + Tigger1 DNA MER2_type 275 400 -2018 2153 104 51 31 chr5 37897687 37898041 -165187491 - THE1B LTR MaLR -3 361 1 11357 98 5 6 chr5 37898041 37899622 -165185910 - THE1B-int LTR MaLR 0 1580 1 2069 114 99 15 chr5 37899622 37899955 -165185577 - THE1B LTR MaLR 0 364 4 * 2344 188 27 6 chr5 37899955 37900419 -165185113 + Tigger1 DNA MER2_type 401 874 -1544 255 294 5 15 chr5 37900448 37900563 -165184969 + G-rich Low_complexity Low_complexity 1 113 0 284 289 5 43 chr5 37900725 37900912 -165184620 + GA-rich Low_complexity Low_complexity 1 180 0 202 338 54 0 chr5 37901717 37901791 -165183741 - L2 LINE L2 -38 3275 3198 22 35 0 0 chr5 37902248 37902277 -165183255 + AT_rich Low_complexity Low_complexity 1 29 0 2229 113 3 0 chr5 37902557 37902868 -165182664 + AluSx SINE Alu 1 312 0 185 0 0 39 chr5 37902877 37902903 -165182629 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 477 309 26 0 chr5 37902938 37903090 -165182442 - MER5A DNA MER1_type -3 186 31 23 68 0 0 chr5 37903517 37903561 -165181971 + AT_rich Low_complexity Low_complexity 1 44 0 301 123 31 0 chr5 37903856 37903921 -165181611 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 356 323 83 0 chr5 37904203 37904395 -165181137 - LTR33 LTR ERVL -313 208 1 3689 106 44 13 chr5 37905072 37905685 -165179847 + L1MA1 LINE L1 5671 6302 0 249 257 43 0 chr5 37907581 37907651 -165177881 - L2 LINE L2 0 3272 3200 39 74 0 0 chr5 37907779 37907860 -165177672 + AT_rich Low_complexity Low_complexity 1 81 0 500 256 28 56 chr5 37908228 37908408 -165177124 - MIR SINE MIR -25 237 63 859 168 0 0 chr5 37909420 37909551 -165175981 - FLAM_C SINE Alu -12 131 1 2236 103 3 0 chr5 37910082 37910384 -165175148 + AluSg SINE Alu 1 303 -7 406 358 13 0 chr5 37912351 37912502 -165173030 + MER91A DNA MER1_type 9 161 -35 990 218 14 23 chr5 37912665 37912881 -165172651 + MER20 DNA MER1_type 1 214 -5 234 0 0 0 chr5 37912915 37912941 -165172591 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2325 53 3 0 chr5 37912941 37913226 -165172306 - AluY SINE Alu -25 286 1 288 120 0 0 chr5 37915098 37915148 -165170384 + (TG)n Simple_repeat Simple_repeat 2 51 0 3084 221 26 13 chr5 37915699 37916839 -165168693 + L1M3 LINE L1 4564 5724 -444 1798 161 129 23 chr5 37916839 37917225 -165168307 + MSTA LTR MaLR 2 428 0 1795 160 0 0 chr5 37917357 37917639 -165167893 - AluSc SINE Alu -27 282 1 22 35 0 0 chr5 37919386 37919415 -165166117 + AT_rich Low_complexity Low_complexity 1 29 0 3228 168 41 3 chr5 37919730 37920345 -165165187 + L1PA15 LINE L1 5526 6163 -2 314 133 50 0 chr5 37920701 37920761 -165164771 - MADE1 DNA Mariner 0 80 18 1544 221 77 25 chr5 37920966 37921409 -165164123 + MLT1C LTR MaLR 1 466 -1 273 197 0 16 chr5 37921701 37921762 -165163770 + Tigger1 DNA MER2_type 1 60 -2358 427 139 25 25 chr5 37921793 37921872 -165163660 + Tigger1 DNA MER2_type 55 133 -2285 250 222 0 19 chr5 37921868 37921922 -165163610 + Tigger1 DNA MER2_type 273 325 -2093 * 3967 192 29 8 chr5 37922054 37922851 -165162681 + Tigger1 DNA MER2_type 1605 2418 0 182 349 0 0 chr5 37923179 37923242 -165162290 - MIR SINE MIR -16 246 184 483 283 90 49 chr5 37923345 37923755 -165161777 + MLT1L LTR MaLR 182 608 -7 1976 141 0 28 chr5 37925246 37925565 -165159967 + AluSg SINE Alu 1 310 0 186 43 0 0 chr5 37925711 37925734 -165159798 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1621 173 0 61 chr5 37925738 37926068 -165159464 + AluJb SINE Alu 1 310 -2 1501 159 3 65 chr5 37926194 37926503 -165159029 + AluJo SINE Alu 1 290 -22 1942 133 3 7 chr5 37928050 37928344 -165157188 - AluSx SINE Alu -17 295 3 244 196 0 0 chr5 37928673 37928719 -165156813 - MADE1 DNA Mariner -34 46 1 22 0 0 0 chr5 37929216 37929238 -165156294 + AT_rich Low_complexity Low_complexity 1 22 0 1795 186 23 23 chr5 37929345 37929732 -165155800 + L1MB1 LINE L1 5782 6168 0 323 318 49 88 chr5 37931380 37931685 -165153847 + MLT1I LTR MaLR 94 386 -23 312 27 0 0 chr5 37931926 37931963 -165153569 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1646 202 53 43 chr5 37932211 37932607 -165152925 - MLT2D LTR ERVL -14 400 1 21 89 0 0 chr5 37933406 37933462 -165152070 + AT_rich Low_complexity Low_complexity 1 56 0 1890 144 0 3 chr5 37933887 37934201 -165151331 - AluSq SINE Alu 0 313 1 248 333 0 0 chr5 37934208 37934298 -165151234 - L1M4 LINE L1 -1405 4741 4652 781 229 139 40 chr5 37934313 37934940 -165150592 - L1MC3 LINE L1 -7 8196 2008 461 259 46 0 chr5 37934954 37935062 -165150470 - MLT2D LTR ERVL -115 299 187 296 165 0 114 chr5 37935062 37935141 -165150391 - L1MC3 LINE L1 -4571 1993 1924 366 225 12 88 chr5 37935152 37935187 -165150345 - L1MC3 LINE L1 -4757 1807 1771 2297 139 14 3 chr5 37935187 37935547 -165149985 - THE1B LTR MaLR 0 364 1 366 225 12 88 chr5 37935547 37935671 -165149861 - L1MC3 LINE L1 -4793 1771 1660 297 291 65 30 chr5 37936001 37936230 -165149302 - L1MC3 LINE L1 -5480 671 392 5853 93 9 0 chr5 37936232 37937096 -165148436 - L1P LINE L1 -2657 3489 2618 4687 105 1 3 chr5 37937096 37937782 -165147750 + L1P LINE L1 1929 2613 -3533 315 184 158 35 chr5 37937882 37937996 -165147536 - L3 LINE CR1 -864 713 586 256 288 114 15 chr5 37938050 37938182 -165147350 - MIR SINE MIR -13 249 105 298 359 21 14 chr5 37938247 37938389 -165147143 - L3 LINE CR1 -1012 565 423 186 296 235 0 chr5 37938604 37938685 -165146847 + MIR SINE MIR 45 144 -64 30 69 0 0 chr5 37939763 37939821 -165145711 + AT_rich Low_complexity Low_complexity 1 58 0 1860 182 0 0 chr5 37939879 37940187 -165145345 + AluSx SINE Alu 3 310 -2 1184 221 16 118 chr5 37940189 37940510 -165145022 + MLT1C LTR MaLR 103 467 0 1681 204 36 11 chr5 37940513 37940926 -165144606 + MLT1C-int LTR MaLR 3 427 -1017 276 30 0 0 chr5 37940931 37940964 -165144568 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1411 224 0 4 chr5 37940971 37941248 -165144284 - AluJo SINE Alu -36 276 1 1770 248 42 56 chr5 37941250 37941754 -165143778 + MLT1C-int LTR MaLR 441 937 -434 16670 89 6 5 chr5 37942069 37944450 -165141082 - L1P LINE L1 -2848 3298 917 1885 83 17 31 chr5 37944447 37944735 -165140797 + L1P LINE L1 3499 3782 -2364 * 521 235 108 20 chr5 37944860 37945064 -165140468 + THE1C LTR MaLR 154 375 0 407 294 81 54 chr5 37945182 37945478 -165140054 - MLT1I LTR MaLR 0 409 106 285 188 0 0 chr5 37945539 37945587 -165139945 - MLT2B1 LTR ERVL 0 397 350 1166 248 33 97 chr5 37945644 37946035 -165139497 - MLT2B1 LTR ERVL -48 384 1 198 343 27 41 chr5 37947256 37947329 -165138203 + MIR SINE MIR 44 115 -93 313 176 27 0 chr5 37947902 37947976 -165137556 + (TA)n Simple_repeat Simple_repeat 1 76 0 11442 98 2 4 chr5 37949914 37951671 -165133861 + L1P3 LINE L1 3752 5505 -649 515 118 0 0 chr5 37951671 37951755 -165133777 + L1PA7 LINE L1 6070 6154 0 21 161 0 0 chr5 37951925 37951956 -165133576 + AT_rich Low_complexity Low_complexity 1 31 0 241 322 67 33 chr5 37952534 37952624 -165132908 - L2 LINE L2 -238 3075 2983 717 214 28 8 chr5 37952671 37952836 -165132696 + MLT1A1 LTR MaLR 216 365 0 1057 317 72 38 chr5 37952842 37953397 -165132135 - L2 LINE L2 -585 2729 2156 199 202 46 0 chr5 37953443 37953552 -165131980 + (TA)n Simple_repeat Simple_repeat 1 114 0 345 348 91 36 chr5 37953553 37953772 -165131760 - L2 LINE L2 -1315 1999 1763 726 22 11 0 chr5 37953772 37953864 -165131668 + L1PA4 LINE L1 6061 6153 -2 345 348 91 36 chr5 37953864 37953897 -165131635 - L2 LINE L2 -1551 1763 1733 1135 226 41 0 chr5 37954094 37954315 -165131217 - Tigger7 DNA MER2_type -503 230 1 980 279 74 7 chr5 37955178 37955475 -165130057 - MLT1E2 LTR MaLR 0 626 310 1261 246 50 52 chr5 37955742 37956001 -165129531 - L1MCa LINE L1 -4944 1482 1224 1318 188 54 44 chr5 37956001 37956299 -165129233 - AluSx SINE Alu -11 301 1 1261 246 50 52 chr5 37956299 37956583 -165128949 - L1MCa LINE L1 -5202 1224 940 579 82 0 103 chr5 37956594 37956691 -165128841 - THE1C LTR MaLR -288 87 1 22 0 0 0 chr5 37957122 37957144 -165128388 + AT_rich Low_complexity Low_complexity 1 22 0 2111 158 11 6 chr5 37957322 37957676 -165127856 - THE1B LTR MaLR -4 360 5 377 320 99 36 chr5 37957733 37958208 -165127324 - L1 LINE L1 -1313 4833 4329 482 115 71 9 chr5 37958395 37958508 -165127024 - L1MA9 LINE L1 -19 6293 6174 518 217 58 7 chr5 37958510 37958648 -165126884 - L1MA9 LINE L1 -237 6075 5931 237 309 93 80 chr5 37960108 37960483 -165125049 + L3 LINE CR1 1193 1572 -5 433 336 102 18 chr5 37960530 37960756 -165124776 - MIR SINE MIR -13 249 5 448 224 9 0 chr5 37961280 37961387 -165124145 + MLT1C-int LTR MaLR 1619 1726 -9 1517 226 100 9 chr5 37961400 37961821 -165123711 + MLT1C LTR MaLR 6 464 -3 39 60 0 0 chr5 37961861 37961928 -165123604 + AT_rich Low_complexity Low_complexity 1 67 0 705 104 17 9 chr5 37962240 37962355 -165123177 - MLT2C2 LTR ERVL -324 140 25 2354 82 0 19 chr5 37962893 37963210 -165122322 - AluY SINE Alu 0 311 1 463 340 65 10 chr5 37963533 37963836 -165121696 - MLT1J1 LTR MaLR -80 370 49 280 240 143 32 chr5 37964106 37964260 -165121272 + L2 LINE L2 1906 2076 -1238 206 412 35 35 chr5 37964808 37964978 -165120554 - MER5A DNA MER1_type -16 173 4 213 316 128 25 chr5 37965055 37965251 -165120281 + L3 LINE CR1 1240 1455 -122 3545 161 30 2 chr5 37965908 37966516 -165119016 - L1PA16 LINE L1 -104 6062 5438 54 16 0 0 chr5 37966885 37966946 -165118586 + AT_rich Low_complexity Low_complexity 1 61 0 645 217 88 77 chr5 37967055 37967327 -165118205 - MLT1B LTR MaLR -113 277 3 207 345 69 0 chr5 37967535 37967622 -165117910 + L2 LINE L2 3209 3301 -12 584 305 145 36 chr5 37967933 37968442 -165117090 + L2 LINE L2 2491 3048 -265 21 0 0 0 chr5 37968490 37968511 -165117021 + AT_rich Low_complexity Low_complexity 1 21 0 2194 228 17 17 chr5 37968746 37969346 -165116186 - L1 LINE L1 -763 5383 4784 509 200 0 30 chr5 37969342 37969477 -165116055 + L1P5 LINE L1 5347 5477 -679 * 21 0 0 0 chr5 37970460 37970481 -165115051 + AT_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr5 37970712 37970743 -165114789 + (TA)n Simple_repeat Simple_repeat 2 32 0 228 325 68 17 chr5 37970973 37971090 -165114442 - L2 LINE L2 -1758 1556 1434 288 135 0 58 chr5 37973072 37973176 -165112356 + (TA)n Simple_repeat Simple_repeat 1 98 0 221 287 46 56 chr5 37973199 37973307 -165112225 + L2 LINE L2 2130 2236 -1078 701 287 27 89 chr5 37973313 37973717 -165111815 + L2 LINE L2 2359 2737 -577 460 325 58 34 chr5 37973749 37973955 -165111577 + LTR16A LTR ERVL 220 430 -20 259 272 0 18 chr5 37975868 37976037 -165109495 - FRAM SINE Alu 0 166 1 25 0 0 0 chr5 37976151 37976176 -165109356 + GC_rich Low_complexity Low_complexity 1 25 0 2319 79 0 0 chr5 37976995 37977298 -165108234 + L1PA7 LINE L1 5847 6149 -5 2125 120 3 0 chr5 37977348 37977649 -165107883 + AluSx SINE Alu 1 302 -10 24 53 0 0 chr5 37977826 37977864 -165107668 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 37977988 37978010 -165107522 + AT_rich Low_complexity Low_complexity 1 22 0 31 88 0 0 chr5 37978432 37978512 -165107020 + AT_rich Low_complexity Low_complexity 1 80 0 483 291 16 48 chr5 37979086 37979275 -165106257 - MIR SINE MIR -1 261 79 1474 162 24 4 chr5 37979306 37979589 -165105943 - AluSx SINE Alu 0 318 31 28 0 0 0 chr5 37979936 37979964 -165105568 + AT_rich Low_complexity Low_complexity 1 28 0 372 123 0 0 chr5 37980153 37980210 -165105322 - Alu SINE Alu -1 300 244 38 22 0 0 chr5 37980475 37980520 -165105012 + AT_rich Low_complexity Low_complexity 1 45 0 184 310 17 0 chr5 37980968 37981026 -165104506 + L2 LINE L2 3198 3256 -16 21 57 0 0 chr5 37982678 37982713 -165102819 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 37982756 37982778 -165102754 + AT_rich Low_complexity Low_complexity 1 22 0 2006 185 6 0 chr5 37982823 37983179 -165102353 - MER47A DNA MER2_type -8 358 1 996 229 121 10 chr5 37984276 37984582 -165100950 - MER2 DNA MER2_type -4 340 1 23 0 0 0 chr5 37985616 37985639 -165099893 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr5 37986122 37986156 -165099376 + AT_rich Low_complexity Low_complexity 1 34 0 239 420 57 6 chr5 37986166 37986323 -165099209 + L2 LINE L2 2919 3083 -230 2122 89 0 4 chr5 37986350 37986666 -165098866 - AluSc SINE Alu 0 315 1 2940 171 45 43 chr5 37986676 37987279 -165098253 - L1MC1 LINE L1 0 6333 5730 21 0 0 0 chr5 37987740 37987761 -165097771 + AT_rich Low_complexity Low_complexity 1 21 0 25 99 0 0 chr5 37988514 37988595 -165096937 + AT_rich Low_complexity Low_complexity 1 81 0 24 77 0 0 chr5 37989644 37989696 -165095836 + AT_rich Low_complexity Low_complexity 1 52 0 199 274 96 0 chr5 37989835 37989908 -165095624 - MIR3 SINE MIR -3 205 126 746 178 34 0 chr5 37990608 37990754 -165094778 + L1PB4 LINE L1 6006 6156 0 21 36 0 0 chr5 37992555 37992583 -165092949 + AT_rich Low_complexity Low_complexity 1 28 0 1844 128 0 0 chr5 37992934 37993200 -165092332 + AluY SINE Alu 37 302 -9 21 57 0 0 chr5 37993456 37993491 -165092041 + AT_rich Low_complexity Low_complexity 1 35 0 183 119 34 17 chr5 37993846 37993905 -165091627 + (TA)n Simple_repeat Simple_repeat 2 61 0 40 41 0 0 chr5 37993909 37993958 -165091574 + AT_rich Low_complexity Low_complexity 1 49 0 5088 61 1 2 chr5 37995292 37996434 -165089098 + L1PA5 LINE L1 4730 5870 -284 242 227 68 57 chr5 38049138 38049314 -165036218 + Charlie7 DNA MER1_type 2430 2607 -5 23 68 0 0 chr5 38050052 38050096 -165035436 + AT_rich Low_complexity Low_complexity 1 44 0 337 311 64 13 chr5 38050360 38050626 -165034906 - L2 LINE L2 -382 2931 2593 22 56 0 0 chr5 38051655 38051691 -165033841 + AT_rich Low_complexity Low_complexity 1 36 0 229 315 41 14 chr5 38051831 38051904 -165033628 - L2 LINE L2 -21 3251 3177 221 359 9 0 chr5 38052589 38052695 -165032837 + GA-rich Low_complexity Low_complexity 2 108 0 316 119 0 34 chr5 38053054 38053113 -165032419 - MLT2A1 LTR ERVL 0 453 397 * 2248 75 3 3 chr5 38053110 38053405 -165032127 - MLT2A1 LTR ERVL -149 295 1 1512 227 39 87 chr5 38054955 38055102 -165030430 + MLT2B1 LTR ERVL 1 154 -366 1896 145 50 36 chr5 38055102 38055461 -165030071 + THE1B LTR MaLR 1 364 0 1512 227 39 87 chr5 38055461 38055855 -165029677 + MLT2B1 LTR ERVL 154 516 -4 237 65 0 0 chr5 38056019 38056050 -165029482 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 215 335 148 19 chr5 38056621 38056776 -165028756 - MIR SINE MIR -3 259 85 226 287 33 49 chr5 38056993 38057115 -165028417 - LTR16A1 LTR ERVL -14 443 324 7418 48 5 2 chr5 38057406 38058301 -165027231 + MER11D LTR ERVK 1 897 0 607 220 195 72 chr5 38059726 38059767 -165025765 + MLT1A1 LTR MaLR 7 42 -323 2003 142 20 0 chr5 38059767 38060070 -165025462 + AluSp SINE Alu 1 309 -4 607 220 195 72 chr5 38060070 38060346 -165025186 + MLT1A1 LTR MaLR 42 363 -2 313 253 148 122 chr5 38060407 38060644 -165024888 + MIR SINE MIR 20 262 0 21 0 0 0 chr5 38060849 38060870 -165024662 + AT_rich Low_complexity Low_complexity 1 21 0 206 333 115 27 chr5 38061085 38061268 -165024264 + L2 LINE L2 3113 3311 -2 219 294 184 0 chr5 38062250 38062359 -165023173 + MIR SINE MIR 17 145 -63 1200 333 69 22 chr5 38062527 38063399 -165022133 + L2 LINE L2 2407 3313 0 3795 204 46 39 chr5 38063508 38064748 -165020784 + L1MB3 LINE L1 4907 6175 -8 184 315 8 100 chr5 38064922 38065052 -165020480 - L3 LINE CR1 -1341 236 119 22 0 0 0 chr5 38065354 38065376 -165020156 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 38065576 38065619 -165019913 + AT_rich Low_complexity Low_complexity 1 43 0 303 179 0 0 chr5 38065890 38065957 -165019575 + (CAT)n Simple_repeat Simple_repeat 3 69 0 317 288 265 8 chr5 38065970 38066132 -165019400 - MIR SINE MIR -23 239 38 21 57 0 0 chr5 38066925 38066960 -165018572 + AT_rich Low_complexity Low_complexity 1 35 0 512 246 31 0 chr5 38066979 38067109 -165018423 - MIR SINE MIR -69 193 60 235 284 74 0 chr5 38067261 38067356 -165018176 + LTR50 LTR ERVL 1 102 -693 6482 124 10 1 chr5 38068833 38070612 -165014920 - L1PA8A LINE L1 0 6131 4337 6597 129 13 29 chr5 38070612 38071751 -165013781 + L1PA8A LINE L1 3211 4331 -1815 368 263 10 30 chr5 38072147 38072246 -165013286 + 7SK RNA RNA 1 97 -96 21 0 0 0 chr5 38072922 38072943 -165012589 + AT_rich Low_complexity Low_complexity 1 21 0 707 300 27 27 chr5 38073678 38073935 -165011597 - MIR SINE MIR -1 261 5 1959 135 10 3 chr5 38074448 38074751 -165010781 - AluSq SINE Alu -2 311 7 1376 158 108 18 chr5 38075275 38075555 -165009977 + THE1C LTR MaLR 1 305 -70 9690 134 35 5 chr5 38075592 38077125 -165008407 + THE1C-int LTR MaLR 1 1580 0 1941 158 21 34 chr5 38077125 38077505 -165008027 + THE1C LTR MaLR 1 375 0 1641 189 3 10 chr5 38077836 38078138 -165007394 + AluJb SINE Alu 1 300 -12 1296 270 53 20 chr5 38078423 38078875 -165006657 - MLT1C LTR MaLR 0 467 1 210 37 0 0 chr5 38078940 38078967 -165006565 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 38079072 38079100 -165006432 + AT_rich Low_complexity Low_complexity 1 28 0 219 226 17 43 chr5 38080092 38080207 -165005325 + T-rich Low_complexity Low_complexity 6 117 0 11314 214 41 31 chr5 38080306 38080356 -165005176 + L1MA4 LINE L1 12 60 -6422 207 0 0 0 chr5 38080356 38080379 -165005153 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 11314 214 41 31 chr5 38080379 38084848 -165000684 + L1MA4 LINE L1 60 4479 -2003 1936 159 48 17 chr5 38084848 38085201 -165000331 - THE1B LTR MaLR 0 364 1 11314 214 41 31 chr5 38085201 38085495 -165000037 + L1MA4 LINE L1 4479 4768 -1714 1640 135 32 97 chr5 38085495 38085896 -164999636 - THE1C LTR MaLR 0 375 1 11314 214 41 31 chr5 38085896 38087291 -164998241 + L1MA4 LINE L1 4768 6422 -60 536 171 9 0 chr5 38087299 38087410 -164998122 + L1MA4 LINE L1 6174 6285 -15 48 77 0 0 chr5 38087421 38087525 -164998007 + AT_rich Low_complexity Low_complexity 1 104 0 21 0 0 0 chr5 38087579 38087600 -164997932 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 38087975 38087997 -164997535 + AT_rich Low_complexity Low_complexity 1 22 0 820 187 0 0 chr5 38088462 38088612 -164996920 - Tigger1 DNA MER2_type -3 2415 2266 9573 106 14 31 chr5 38088643 38090145 -164995387 + L1PA13 LINE L1 433 1909 -4237 565 159 40 24 chr5 38090149 38090275 -164995257 - Tigger1 DNA MER2_type -161 2257 2130 * 2295 165 61 57 chr5 38090264 38090773 -164994759 - Tigger1 DNA MER2_type -1665 753 243 2280 204 44 25 chr5 38090773 38091341 -164994191 - L1P LINE L1 -2431 3715 3137 * 5399 171 41 12 chr5 38091340 38092637 -164992895 + L1PA13 LINE L1 4164 5496 -672 641 234 31 42 chr5 38092684 38092876 -164992656 + L1MC3 LINE L1 6920 7109 -676 330 26 0 0 chr5 38092879 38092918 -164992614 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3932 157 8 1 chr5 38092919 38093581 -164991951 + L1PA13 LINE L1 5493 6158 -5 1001 206 36 24 chr5 38093583 38093830 -164991702 - Tigger1 DNA MER2_type -2168 250 1 6710 194 65 18 chr5 38094210 38095962 -164989570 + L1MA3 LINE L1 2629 4297 -3427 2126 144 11 8 chr5 38095962 38096316 -164989216 + THE1A LTR MaLR 1 355 0 6710 194 65 18 chr5 38096316 38099214 -164986318 + L1MA3 LINE L1 4297 7723 -1 255 358 43 12 chr5 38099456 38099618 -164985914 + MER115 DNA AcHobo 1 167 -526 404 341 24 6 chr5 38099752 38099919 -164985613 - MIR SINE MIR -58 204 35 34 42 0 0 chr5 38100415 38100463 -164985069 + AT_rich Low_complexity Low_complexity 1 48 0 3594 94 2 2 chr5 38100534 38101015 -164984517 + THE1B-int LTR MaLR 1100 1580 0 1844 122 0 90 chr5 38101017 38101361 -164984171 + THE1B LTR MaLR 3 315 -49 21 57 0 0 chr5 38101983 38102018 -164983514 + AT_rich Low_complexity Low_complexity 1 35 0 411 330 145 51 chr5 38102373 38102827 -164982705 + L2 LINE L2 2817 3313 0 766 166 0 28 chr5 38105085 38105230 -164980302 - FLAM_C SINE Alu 0 143 3 344 284 72 50 chr5 38105347 38105625 -164979907 + L2 LINE L2 1799 2082 -1232 2477 166 18 0 chr5 38105802 38106249 -164979283 - L1MA8 LINE L1 -22 6269 5815 394 170 149 0 chr5 38106254 38106348 -164979184 + L1MA4 LINE L1 5748 5855 -445 198 0 0 0 chr5 38108085 38108107 -164977425 + (CAT)n Simple_repeat Simple_repeat 3 24 0 2008 80 40 4 chr5 38108773 38109095 -164976437 + AluSq SINE Alu 1 332 0 25 65 0 0 chr5 38110604 38110650 -164974882 + AT_rich Low_complexity Low_complexity 1 46 0 236 283 0 0 chr5 38111034 38111087 -164974445 + (CATA)n Simple_repeat Simple_repeat 3 55 0 460 357 68 51 chr5 38111219 38111689 -164973843 + MLT1H LTR MaLR 2 479 -70 427 232 63 79 chr5 38111691 38111881 -164973651 - L1MEd LINE L1 -4930 1189 1003 927 248 12 28 chr5 38111883 38112137 -164973395 + MLT1A1 LTR MaLR 114 363 -2 335 343 46 29 chr5 38112163 38112363 -164973169 + L1ME LINE L1 1253 1605 -5002 25 65 0 0 chr5 38112456 38112502 -164973030 + AT_rich Low_complexity Low_complexity 1 46 0 4726 182 52 0 chr5 38112510 38113734 -164971798 + L1PA16 LINE L1 4927 6209 0 319 220 61 8 chr5 38113773 38113887 -164971645 + L1ME LINE L1 1586 1824 -4602 3108 286 68 24 chr5 38113912 38115665 -164969867 + L1ME LINE L1 3538 5368 -1058 1404 261 98 1 chr5 38115724 38116257 -164969275 + L1ME LINE L1 5467 6052 -394 453 242 35 116 chr5 38116323 38116618 -164968914 + L1MB7 LINE L1 5667 5925 -317 1950 138 0 3 chr5 38116618 38116915 -164968617 + AluSx SINE Alu 1 296 -16 453 242 35 116 chr5 38116915 38116997 -164968535 + L1MB7 LINE L1 5925 6012 -230 243 306 69 7 chr5 38117022 38117166 -164968366 + L1MA10 LINE L1 6179 6331 -3 877 76 0 0 chr5 38117502 38117620 -164967912 + L1PA5 LINE L1 6037 6154 0 23 33 0 0 chr5 38117843 38117873 -164967659 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr5 38118430 38118470 -164967062 + AT_rich Low_complexity Low_complexity 1 40 0 208 313 15 30 chr5 38118674 38118741 -164966791 - MIR SINE MIR -151 111 46 2353 81 0 3 chr5 38119013 38119323 -164966209 + AluY SINE Alu 1 309 -2 249 33 0 0 chr5 38119323 38119353 -164966179 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 202 184 12 chr5 38119590 38120014 -164965518 - L1MA3 LINE L1 -1 6304 5806 249 33 0 0 chr5 38120047 38120077 -164965455 + (TA)n Simple_repeat Simple_repeat 2 31 0 1661 165 170 16 chr5 38120438 38120808 -164964724 + MSTA LTR MaLR 1 427 -1 20276 157 40 12 chr5 38120906 38124696 -164960836 + L1M1 LINE L1 12 3915 -3650 732 151 16 0 chr5 38124701 38124827 -164960705 + AluSq/x SINE Alu 1 128 -184 2732 121 56 21 chr5 38124933 38125413 -164960119 + L1MA3 LINE L1 5808 6304 -1 482 0 0 17 chr5 38126403 38126462 -164959070 + (TATAA)n Simple_repeat Simple_repeat 5 62 0 25 0 0 0 chr5 38126919 38126944 -164958588 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 38128368 38128399 -164957133 + AT_rich Low_complexity Low_complexity 1 31 0 211 304 114 114 chr5 38130227 38130411 -164955121 - MIR SINE MIR -59 203 20 213 315 89 48 chr5 38130522 38130653 -164954879 + MIR SINE MIR 20 154 -63 30 0 0 0 chr5 38130703 38130733 -164954799 + AT_rich Low_complexity Low_complexity 1 30 0 551 232 85 17 chr5 38131126 38131303 -164954229 + MER5A DNA MER1_type 1 189 0 329 306 74 9 chr5 38131436 38131544 -164953988 - L2 LINE L2 -3 3269 3155 241 344 16 23 chr5 38132178 38132306 -164953226 - L2 LINE L2 -999 2315 2189 1535 210 45 81 chr5 38133548 38134015 -164951517 - MLT1C LTR MaLR -17 450 1 2199 122 0 0 chr5 38134050 38134361 -164951171 + AluSx SINE Alu 1 311 -1 222 171 0 0 chr5 38135839 38135880 -164949652 + (TA)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr5 38136043 38136078 -164949454 + AT_rich Low_complexity Low_complexity 1 35 0 2214 99 0 3 chr5 38136462 38136755 -164948777 + AluSc SINE Alu 1 292 -17 267 114 0 0 chr5 38136862 38136906 -164948626 + (T)n Simple_repeat Simple_repeat 1 44 0 447 68 0 0 chr5 38137018 38137077 -164948455 + (TA)n Simple_repeat Simple_repeat 1 59 0 520 321 29 44 chr5 38137352 38137692 -164947840 - MLT1J1 LTR MaLR 0 446 112 361 240 20 60 chr5 38137842 38137992 -164947540 - L1MC5 LINE L1 -182 7779 7636 206 293 23 83 chr5 38138283 38138416 -164947116 - MIR3 SINE MIR -52 156 32 198 318 91 0 chr5 38141170 38141236 -164944296 + MIR SINE MIR 120 191 -71 2030 96 17 3 chr5 38141907 38142199 -164943333 + AluSc SINE Alu 1 296 -13 182 315 0 76 chr5 38142907 38142999 -164942533 + MER5A DNA MER1_type 23 107 -82 221 283 172 0 chr5 38143256 38143355 -164942177 + MIR SINE MIR 145 260 -2 23 0 0 0 chr5 38143630 38143653 -164941879 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr5 38143717 38143747 -164941785 + AT_rich Low_complexity Low_complexity 1 30 0 2140 73 42 0 chr5 38143806 38144093 -164941439 - AluY SINE Alu -12 299 1 2072 99 0 0 chr5 38144698 38145016 -164940516 - AluSc SINE Alu 0 318 1 2114 118 3 13 chr5 38145016 38145330 -164940202 - AluSx SINE Alu 0 312 1 43 35 0 0 chr5 38145624 38145681 -164939851 + AT_rich Low_complexity Low_complexity 1 57 0 1986 103 4 0 chr5 38146530 38146802 -164938730 + AluSc SINE Alu 35 307 -2 2175 99 3 0 chr5 38147080 38147374 -164938158 + AluY SINE Alu 1 295 -16 3302 234 40 43 chr5 38147506 38148535 -164936997 + L1PA12 LINE L1 2234 3266 -4318 2136 120 10 0 chr5 38148535 38148835 -164936697 - AluSx SINE Alu -9 303 1 3302 234 40 43 chr5 38148835 38149035 -164936497 + L1PA12 LINE L1 3266 3465 -4119 3162 143 76 27 chr5 38149039 38149674 -164935858 + L1PA16 LINE L1 5490 6155 -11 25 0 0 0 chr5 38149825 38149850 -164935682 + AT_rich Low_complexity Low_complexity 1 25 0 193 350 68 29 chr5 38150102 38150205 -164935327 + MIR SINE MIR 18 124 -138 36 87 0 0 chr5 38150282 38150374 -164935158 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr5 38150473 38150501 -164935031 + AT_rich Low_complexity Low_complexity 1 28 0 611 250 0 91 chr5 38150891 38151111 -164934421 - L2 LINE L2 -2 3311 3112 631 42 21 11 chr5 38151361 38151456 -164934076 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 334 344 25 25 chr5 38202681 38202844 -164882688 - MIR SINE MIR -97 165 3 334 369 63 11 chr5 38203972 38204240 -164881292 - L1M4 LINE L1 -1300 4846 4565 1987 191 10 23 chr5 38205272 38205801 -164879731 - L1M2 LINE L1 -643 5648 5131 417 108 15 0 chr5 38205798 38205863 -164879669 - L1MA7 LINE L1 -444 5847 5782 * 397 289 75 35 chr5 38206204 38206432 -164879100 + L1MC/D LINE L1 4777 5013 -1133 264 246 117 35 chr5 38206640 38206811 -164878721 + L1MC/D LINE L1 5265 5449 -2359 248 186 17 0 chr5 38209100 38209159 -164876373 + (TA)n Simple_repeat Simple_repeat 2 61 0 541 237 9 0 chr5 38209159 38209273 -164876259 - MLT1B LTR MaLR -273 117 3 286 175 67 17 chr5 38209352 38209472 -164876060 + (TA)n Simple_repeat Simple_repeat 1 126 0 1990 143 19 10 chr5 38210117 38210425 -164875107 + AluSx SINE Alu 2 312 0 252 264 36 50 chr5 38210432 38210572 -164874960 + MER93a LTR ERV1 117 254 -148 * 374 301 21 21 chr5 38210550 38210693 -164874839 + MER93a LTR ERV1 201 343 -59 21 0 0 0 chr5 38211047 38211068 -164874464 + AT_rich Low_complexity Low_complexity 1 21 0 263 238 24 12 chr5 38212315 38212399 -164873133 + L1M4 LINE L1 2944 3028 -3118 330 234 61 30 chr5 38212450 38212681 -164872851 + L1M4 LINE L1 3029 3266 -2880 276 98 0 0 chr5 38212682 38212723 -164872809 + Tigger1 DNA MER2_type 575 615 -1803 2068 109 0 35 chr5 38212724 38213035 -164872497 - AluSx SINE Alu -12 300 1 962 204 44 19 chr5 38213225 38213667 -164871865 - Charlie5 DNA MER1_type 0 2621 17 23 54 0 0 chr5 38213958 38213995 -164871537 + AT_rich Low_complexity Low_complexity 1 37 0 450 95 214 0 chr5 38214170 38214254 -164871278 + L1PA8 LINE L1 6041 6142 -30 280 153 68 0 chr5 38214256 38214315 -164871217 + L1PA8A LINE L1 6038 6100 -31 247 177 65 0 chr5 38214288 38214350 -164871182 + L1PA8A LINE L1 6038 6103 -28 * 259 164 66 0 chr5 38214385 38214446 -164871086 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 38214417 38214478 -164871054 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 38214481 38214542 -164870990 + L1PA8A LINE L1 6039 6103 -28 266 169 68 0 chr5 38214547 38214606 -164870926 + L1PA8A LINE L1 6041 6103 -28 * 398 59 0 0 chr5 38214577 38214628 -164870904 + L1PA8 LINE L1 6078 6128 -44 376 294 46 50 chr5 38214729 38214827 -164870705 + HAL1 LINE L1 964 1061 -1446 2571 45 0 7 chr5 38214827 38215136 -164870396 + AluY SINE Alu 1 307 -4 376 294 46 50 chr5 38215136 38215255 -164870277 + HAL1 LINE L1 1061 1180 -1327 234 272 10 39 chr5 38215370 38215473 -164870059 + HAL1 LINE L1 1388 1487 -1020 311 296 81 81 chr5 38215507 38215633 -164869899 + HAL1 LINE L1 1600 1725 -782 2048 129 16 0 chr5 38215633 38215936 -164869596 + AluSx SINE Alu 1 308 -4 311 296 81 81 chr5 38215936 38216249 -164869283 + HAL1 LINE L1 1725 2042 -465 1974 126 3 20 chr5 38216249 38216551 -164868981 + AluSg SINE Alu 1 297 -13 311 296 81 81 chr5 38216551 38216692 -164868840 + HAL1 LINE L1 2041 2181 -326 199 326 0 0 chr5 38217420 38217469 -164868063 + MIR SINE MIR 98 146 -62 237 348 85 0 chr5 38217631 38217795 -164867737 - MIR SINE MIR -71 191 14 398 143 13 13 chr5 38218014 38218091 -164867441 - Tigger1 DNA MER2_type -476 1942 1866 1571 160 4 0 chr5 38218094 38218369 -164867163 + AluSg SINE Alu 37 312 0 1150 142 37 50 chr5 38218381 38218599 -164866933 + AluSx SINE Alu 44 258 -54 218 123 15 46 chr5 38218642 38218707 -164866825 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 643 362 91 19 chr5 38219407 38220051 -164865481 + L2 LINE L2 2365 3048 -265 6271 158 22 15 chr5 38220439 38221551 -164863981 - Tigger1 DNA MER2_type -1298 1120 1 23 33 0 0 chr5 38221662 38221692 -164863840 + AT_rich Low_complexity Low_complexity 1 30 0 6447 35 8 2 chr5 38221695 38222879 -164862653 + L1P2 LINE L1 4590 5776 -379 5448 180 16 25 chr5 38223272 38223480 -164862052 + L1PB3 LINE L1 4194 4402 -1752 318 67 0 0 chr5 38223480 38223525 -164862007 + (CAATA)n Simple_repeat Simple_repeat 2 46 0 5448 180 16 25 chr5 38223525 38225294 -164860238 + L1PB3 LINE L1 4402 6151 -3 3180 219 101 10 chr5 38225345 38226045 -164859487 + MER21B LTR ERV1 55 818 -45 231 364 58 0 chr5 38227674 38227795 -164857737 + MIR SINE MIR 49 176 -86 1648 205 5 54 chr5 38228320 38228730 -164856802 + MLT1B LTR MaLR 1 390 0 186 207 83 136 chr5 38228932 38229101 -164856431 + L2 LINE L2 3136 3295 -18 23 33 0 0 chr5 38229343 38229373 -164856159 + AT_rich Low_complexity Low_complexity 1 30 0 3567 241 63 42 chr5 38230996 38232326 -164853206 + L1 LINE L1 3941 5298 -848 3438 207 62 6 chr5 38232328 38233375 -164852157 + L1P4 LINE L1 4376 5473 -693 6951 55 0 0 chr5 38233375 38234497 -164851035 - L1PA6 LINE L1 -3 6151 5030 1317 195 4 4 chr5 38234600 38234836 -164850696 - AluSq SINE Alu -77 236 1 233 303 55 9 chr5 38234890 38234999 -164850533 + L2 LINE L2 1587 1700 -1614 2451 286 80 95 chr5 38235981 38237747 -164847785 + L2 LINE L2 262 2002 -1312 669 294 35 51 chr5 38237786 38238041 -164847491 + L2 LINE L2 2553 2803 -511 2020 83 0 104 chr5 38238041 38238379 -164847153 + AluSg SINE Alu 1 303 -7 294 227 28 28 chr5 38238604 38238745 -164846787 + G-rich Low_complexity Low_complexity 2 142 0 403 302 90 37 chr5 38238866 38239134 -164846398 + L2 LINE L2 2996 3277 -36 851 189 87 5 chr5 38239535 38239720 -164845812 + L1MC1 LINE L1 6128 6327 -6 299 336 73 69 chr5 38240100 38240347 -164845185 - MIR SINE MIR -12 250 3 384 362 93 47 chr5 38241310 38241804 -164843728 + MLT1K LTR MaLR 70 586 -2 23 0 0 0 chr5 38242015 38242038 -164843494 + AT_rich Low_complexity Low_complexity 1 23 0 234 62 0 0 chr5 38242437 38242469 -164843063 + (CA)n Simple_repeat Simple_repeat 2 33 0 10964 212 21 51 chr5 38242469 38245383 -164840149 + L1M1 LINE L1 13 3236 -4329 1779 148 18 0 chr5 38245383 38245660 -164839872 - AluSx SINE Alu -6 306 25 10964 212 21 51 chr5 38245660 38245809 -164839723 + L1M1 LINE L1 3236 3388 -4177 8563 220 50 9 chr5 38246216 38248457 -164837075 + L1M1 LINE L1 3496 5827 -1738 1099 228 19 0 chr5 38248438 38248745 -164836787 + L1 LINE L1 4306 4618 -2947 * 2949 186 49 9 chr5 38249508 38250157 -164835375 - L1MB1 LINE L1 -3 6165 5491 21 0 0 0 chr5 38250188 38250209 -164835323 + AT_rich Low_complexity Low_complexity 1 21 0 1913 141 0 0 chr5 38250234 38250543 -164834989 - AluSx SINE Alu 0 309 1 252 234 47 75 chr5 38251932 38252039 -164833493 - MIR SINE MIR -105 157 54 22 80 0 0 chr5 38252087 38252137 -164833395 + AT_rich Low_complexity Low_complexity 1 50 0 541 175 111 16 chr5 38252431 38252557 -164832975 - MER58B DNA MER1_type 0 341 204 17773 52 12 35 chr5 38252568 38255028 -164830504 - L1PA4 LINE L1 -1586 4560 2157 7152 47 6 0 chr5 38255028 38256631 -164828901 + L1PA4 LINE L1 4548 6155 0 257 183 33 0 chr5 38256661 38256721 -164828811 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 242 333 24 16 chr5 38256834 38256957 -164828575 + MIR SINE MIR 126 249 -13 345 223 0 0 chr5 38258428 38258522 -164827010 + (TA)n Simple_repeat Simple_repeat 2 95 0 21 36 0 0 chr5 38259685 38259713 -164825819 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr5 38260061 38260092 -164825440 + (TA)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr5 38260779 38260819 -164824713 + AT_rich Low_complexity Low_complexity 1 40 0 189 107 0 0 chr5 38261275 38261303 -164824229 + (CA)n Simple_repeat Simple_repeat 2 29 0 27 29 0 0 chr5 38261846 38261880 -164823652 + AT_rich Low_complexity Low_complexity 1 34 0 257 208 0 0 chr5 38263940 38263988 -164821544 + L2 LINE L2 3195 3242 -71 2346 21 7 3 chr5 38264879 38265161 -164820371 + AluYa5 SINE Alu 1 283 -28 204 40 0 0 chr5 38266463 38266488 -164819044 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 245 29 29 0 chr5 38266487 38266521 -164819011 + (TG)n Simple_repeat Simple_repeat 2 36 0 339 194 0 0 chr5 38267088 38267181 -164818351 + (TA)n Simple_repeat Simple_repeat 1 93 0 22 0 0 0 chr5 38267978 38268000 -164817532 + AT_rich Low_complexity Low_complexity 1 22 0 258 105 0 0 chr5 38268454 38268492 -164817040 + (TA)n Simple_repeat Simple_repeat 1 38 0 197 133 0 0 chr5 38268618 38268648 -164816884 - L2 LINE L2 -15 3298 3269 49 76 0 0 chr5 38269792 38269897 -164815635 + AT_rich Low_complexity Low_complexity 1 105 0 293 348 135 10 chr5 38270442 38270649 -164814883 + MIR SINE MIR 12 244 -18 22 35 0 0 chr5 38270865 38270894 -164814638 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 38270976 38271003 -164814529 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1312 221 40 63 chr5 38271166 38271641 -164813891 - MLT2C2 LTR ERVL 0 464 1 31 68 0 0 chr5 38271723 38271782 -164813750 + AT_rich Low_complexity Low_complexity 1 59 0 2052 131 3 10 chr5 38272847 38273160 -164812372 + AluSx SINE Alu 1 311 -1 277 215 15 0 chr5 38273220 38273285 -164812247 - MER89 LTR ERV1 -9 550 485 1075 249 46 11 chr5 38273389 38273827 -164811705 - MER89 LTR ERV1 -32 527 1 227 27 0 54 chr5 38273850 38273887 -164811645 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 800 137 0 46 chr5 38273888 38274019 -164811513 + AluSq/x SINE Alu 1 125 -187 197 86 57 0 chr5 38274019 38274054 -164811478 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 27 29 0 0 chr5 38274163 38274197 -164811335 + AT_rich Low_complexity Low_complexity 1 34 0 360 306 157 20 chr5 38275893 38276301 -164809231 + HAL1b LINE L1 83 546 -802 261 31 0 0 chr5 38276479 38276511 -164809021 - AluSc SINE Alu -13 286 255 638 307 91 66 chr5 38276645 38277179 -164808353 - L2 LINE L2 0 3313 2766 1850 196 6 3 chr5 38277240 38277572 -164807960 + MER7A DNA MER2_type 16 346 0 1689 218 3 3 chr5 38277732 38278058 -164807474 + MLT1A1 LTR MaLR 1 326 -39 23 33 0 0 chr5 38278703 38278733 -164806799 + AT_rich Low_complexity Low_complexity 1 30 0 272 336 64 0 chr5 38278854 38278964 -164806568 + MER110-int LTR ERV1 4336 4452 -195 640 260 129 54 chr5 38278967 38279065 -164806467 + MER110 LTR ERV1 116 205 -286 1291 198 65 47 chr5 38279065 38279403 -164806129 + MER2 DNA MER2_type 1 344 0 640 260 129 54 chr5 38279403 38279654 -164805878 + MER110 LTR ERV1 205 491 0 464 118 53 13 chr5 38281470 38281622 -164803910 + (TA)n Simple_repeat Simple_repeat 2 159 0 541 104 0 0 chr5 38281623 38281700 -164803832 - AluY SINE Alu -30 281 205 351 0 0 0 chr5 38281724 38281763 -164803769 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr5 38281900 38281925 -164803607 + (CA)n Simple_repeat Simple_repeat 2 26 0 2104 115 7 0 chr5 38283762 38284058 -164801474 + AluSx SINE Alu 1 298 -14 2430 72 0 0 chr5 38284767 38285073 -164800459 - AluY SINE Alu -5 306 1 21 0 0 0 chr5 38285597 38285618 -164799914 + AT_rich Low_complexity Low_complexity 1 21 0 1705 262 40 38 chr5 38286323 38286896 -164798636 + MLT1E LTR MaLR 17 590 -3 617 282 126 27 chr5 38287142 38287443 -164798089 + MLT1G1 LTR MaLR 263 593 -2 26 30 0 0 chr5 38288435 38288468 -164797064 + AT_rich Low_complexity Low_complexity 1 33 0 3228 137 27 14 chr5 38288631 38289082 -164796450 - L1MA8 LINE L1 -3 6288 5826 1912 113 3 61 chr5 38289082 38289393 -164796139 - AluSc SINE Alu -16 293 1 3228 137 27 14 chr5 38289393 38289532 -164796000 - L1MA8 LINE L1 -465 5826 5690 1411 180 45 14 chr5 38289694 38290265 -164795267 + L1PA16 LINE L1 5473 6122 -44 3689 152 25 126 chr5 38290317 38290775 -164794757 + L1MB1 LINE L1 5309 5811 -357 1695 126 0 4 chr5 38290775 38291029 -164794503 + AluSx SINE Alu 1 253 -59 3689 152 25 126 chr5 38291029 38291165 -164794367 + L1MB1 LINE L1 5811 5959 -209 2168 102 3 13 chr5 38291165 38291468 -164794064 + AluY SINE Alu 3 302 -9 3689 152 25 126 chr5 38291468 38291828 -164793704 + L1MB1 LINE L1 5959 6168 0 224 282 81 54 chr5 38293577 38293726 -164791806 - MIR SINE MIR -34 228 76 1644 120 47 63 chr5 38293734 38294051 -164791481 - AluSq SINE Alu -1 312 1 1335 174 25 73 chr5 38294437 38294665 -164790867 + MLT1A1 LTR MaLR 1 207 -158 2049 126 38 3 chr5 38294665 38295007 -164790525 + THE1A LTR MaLR 2 355 0 1335 174 25 73 chr5 38295007 38295134 -164790398 + MLT1A1 LTR MaLR 207 339 -26 2476 55 0 7 chr5 38295134 38295444 -164790088 - AluY SINE Alu 0 311 4 235 189 14 14 chr5 38297463 38297537 -164787995 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr5 38298143 38298165 -164787367 + AT_rich Low_complexity Low_complexity 1 22 0 367 343 77 33 chr5 38298618 38298983 -164786549 + HAL1 LINE L1 368 748 -1759 473 321 74 5 chr5 38299543 38299758 -164785774 + MIR SINE MIR 31 260 -2 310 371 26 0 chr5 38300355 38300506 -164785026 + MIR SINE MIR 96 250 -12 21 57 0 0 chr5 38300559 38300594 -164784938 + AT_rich Low_complexity Low_complexity 1 35 0 6185 68 2 0 chr5 38301387 38302182 -164783350 - L1PA8 LINE L1 -1 6171 5375 181 280 20 0 chr5 38303797 38303847 -164781685 - MIR SINE MIR -56 152 102 192 319 58 0 chr5 38303943 38304012 -164781520 + MIR SINE MIR 68 140 -122 206 348 22 22 chr5 38304887 38304976 -164780556 + MIR3 SINE MIR 101 189 -19 1010 155 0 6 chr5 38305288 38305462 -164780070 + AluSg/x SINE Alu 140 312 0 183 80 0 0 chr5 38305664 38305689 -164779843 + (T)n Simple_repeat Simple_repeat 1 25 0 605 256 7 114 chr5 38306326 38306607 -164778925 - MER31B LTR ERV1 -5 461 211 442 181 62 49 chr5 38306704 38306848 -164778684 - MER51D LTR ERV1 -43 614 469 311 220 44 11 chr5 38307305 38307396 -164778136 - MER31B LTR ERV1 -372 94 1 232 284 20 20 chr5 38308011 38308113 -164777419 + CT-rich Low_complexity Low_complexity 3 104 0 1033 233 5 98 chr5 38308142 38308528 -164777004 + MLT1A1 LTR MaLR 14 363 -2 206 167 0 56 chr5 38308774 38308801 -164776731 + T-rich Low_complexity Low_complexity 5 29 -26 3051 48 8 0 chr5 38308801 38309179 -164776353 - L1PA5 LINE L1 -4 6150 5770 206 167 0 56 chr5 38309179 38309205 -164776327 + T-rich Low_complexity Low_complexity 29 55 0 24 53 0 0 chr5 38309332 38309370 -164776162 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 38310340 38310378 -164775154 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 38310722 38310743 -164774789 + AT_rich Low_complexity Low_complexity 1 21 0 2128 104 0 30 chr5 38310950 38311248 -164774284 + AluSq SINE Alu 1 289 -24 2447 128 8 0 chr5 38311651 38312011 -164773521 - THE1B LTR MaLR 0 364 2 370 305 8 17 chr5 38312064 38312182 -164773350 + L2 LINE L2 3197 3313 0 2131 172 27 5 chr5 38313262 38313668 -164771864 + L1PA13 LINE L1 5743 6157 -6 373 240 12 2 chr5 38314598 38314702 -164770830 - L1M4 LINE L1 -1999 4147 4044 23 33 0 0 chr5 38314835 38314865 -164770667 + AT_rich Low_complexity Low_complexity 1 30 0 1974 119 27 7 chr5 38314867 38315162 -164770370 + AluSx SINE Alu 1 301 -11 2206 127 0 0 chr5 38315522 38315822 -164769710 + AluSx SINE Alu 1 300 -12 234 284 30 0 chr5 38318186 38318253 -164767279 + GA-rich Low_complexity Low_complexity 3 71 0 24 0 0 0 chr5 38319579 38319603 -164765929 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr5 38320098 38320151 -164765381 + AT_rich Low_complexity Low_complexity 1 53 0 3217 55 0 0 chr5 38322153 38322554 -164762978 + L1PA4 LINE L1 5753 6153 -2 1556 329 71 24 chr5 38322710 38323460 -164762072 + L1M4c LINE L1 423 1207 -5096 1687 269 44 38 chr5 38323529 38324329 -164761203 + L1M4c LINE L1 1029 1833 -4551 2876 254 68 15 chr5 38324401 38326107 -164759425 + L1M4c LINE L1 2054 3879 -2503 290 154 29 0 chr5 38326370 38326434 -164759098 - Alu SINE Alu -7 295 245 297 0 0 0 chr5 38326434 38326467 -164759065 + (T)n Simple_repeat Simple_repeat 1 33 0 744 107 82 0 chr5 38326467 38326589 -164758943 - AluSq/x SINE Alu -179 133 2 555 260 138 86 chr5 38327108 38327377 -164758155 - L2 LINE L2 -836 2478 2196 425 382 62 6 chr5 38327393 38327571 -164757961 + MER91A DNA MER1_type 8 195 -1 1133 293 86 34 chr5 38327751 38328284 -164757248 - L2 LINE L2 -1203 2111 1551 249 33 0 0 chr5 38328285 38328315 -164757217 + (CA)n Simple_repeat Simple_repeat 2 31 0 1494 206 17 63 chr5 38328456 38328806 -164756726 + MLT1B LTR MaLR 57 390 0 21 36 0 0 chr5 38329285 38329313 -164756219 + AT_rich Low_complexity Low_complexity 1 28 0 184 150 67 67 chr5 38329490 38329550 -164755982 + L3 LINE CR1 776 835 -742 22 70 0 0 chr5 38329893 38329936 -164755596 + AT_rich Low_complexity Low_complexity 1 43 0 846 261 46 42 chr5 38330750 38331216 -164754316 - LTR40c LTR ERVL 0 519 5 230 259 35 0 chr5 38331277 38331335 -164754197 + L2 LINE L2 3237 3296 -17 420 353 47 22 chr5 38331442 38331674 -164753858 - L2 LINE L2 -554 2760 2523 53 78 0 0 chr5 38331819 38331935 -164753597 + AT_rich Low_complexity Low_complexity 1 116 0 23 0 0 0 chr5 38332586 38332609 -164752923 + AT_rich Low_complexity Low_complexity 1 23 0 269 206 48 16 chr5 38333460 38333523 -164752009 + MER116 DNA Mariner 1 65 -15 450 265 200 14 chr5 38333533 38333748 -164751784 - MIR SINE MIR 0 262 8 671 204 0 0 chr5 38334289 38334426 -164751106 - FRAM SINE Alu -1 175 39 1846 177 0 0 chr5 38334518 38334828 -164750704 + AluSx SINE Alu 1 310 -2 2153 86 4 4 chr5 38336295 38336626 -164748906 + AluSc SINE Alu 1 331 0 4025 152 47 5 chr5 38338077 38338823 -164746709 + L1MA4A LINE L1 5515 6291 -12 393 320 102 27 chr5 38338847 38339072 -164746460 - MIR SINE MIR -19 243 2 1994 134 56 20 chr5 38339550 38339908 -164745624 - THE1C LTR MaLR 0 375 5 228 357 91 46 chr5 38340006 38340269 -164745263 + MLT1K LTR MaLR 278 552 -36 198 295 69 81 chr5 38341137 38341310 -164744222 - L2 LINE L2 -1362 1952 1782 27 73 0 0 chr5 38343449 38343504 -164742028 + AT_rich Low_complexity Low_complexity 1 55 0 269 369 15 23 chr5 38343643 38343773 -164741759 - L2 LINE L2 -655 2659 2531 230 240 0 0 chr5 38343855 38343905 -164741627 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 15848 148 16 8 chr5 38344062 38347616 -164737916 + L1PA10 LINE L1 2584 6164 -4 213 132 0 0 chr5 38347699 38347737 -164737795 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1381 272 62 14 chr5 38348641 38349079 -164736453 + MLT1C LTR MaLR 4 462 -5 22 0 0 0 chr5 38349586 38349608 -164735924 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 38350092 38350120 -164735412 + AT_rich Low_complexity Low_complexity 1 28 0 364 186 0 0 chr5 38350540 38350633 -164734899 - AluJ/FRAM SINE Alu 0 316 224 1069 263 40 54 chr5 38350865 38351321 -164734211 - MLT1E2 LTR MaLR -184 442 1 478 356 121 11 chr5 38351322 38351769 -164733763 - L1MEc LINE L1 -5789 607 112 23 0 0 0 chr5 38353062 38353085 -164732447 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 38353237 38353258 -164732274 + AT_rich Low_complexity Low_complexity 1 21 0 1911 126 51 7 chr5 38354614 38354908 -164730624 - AluSq SINE Alu -4 309 3 381 22 0 0 chr5 38355453 38355499 -164730033 + (CA)n Simple_repeat Simple_repeat 2 47 0 1577 111 0 0 chr5 38357656 38357873 -164727659 - AluSg/x SINE Alu -5 307 91 198 71 0 0 chr5 38358030 38358058 -164727474 + (TTA)n Simple_repeat Simple_repeat 1 28 0 272 191 56 34 chr5 38358155 38358244 -164727288 - L1MC4 LINE L1 -1338 6704 6614 222 219 0 0 chr5 38358246 38358287 -164727245 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 443 345 58 34 chr5 38358298 38358626 -164726906 - L1 LINE L1 -1114 5032 4697 196 212 30 0 chr5 38360048 38360114 -164725418 + (TA)n Simple_repeat Simple_repeat 2 69 0 1746 144 55 38 chr5 38360118 38360485 -164725047 - THE1C LTR MaLR -2 373 1 8841 150 19 34 chr5 38360490 38362087 -164723445 - THE1C-int LTR MaLR -5 1575 4 1621 162 68 41 chr5 38362090 38362455 -164723077 - THE1C LTR MaLR 0 375 1 309 183 0 0 chr5 38362455 38362515 -164723017 + (CA)n Simple_repeat Simple_repeat 1 60 0 2079 125 3 0 chr5 38363007 38363303 -164722229 + AluSg SINE Alu 1 297 -13 47 0 0 0 chr5 38363909 38363956 -164721576 + AT_rich Low_complexity Low_complexity 1 47 0 300 27 0 0 chr5 38364161 38364198 -164721334 + (TG)n Simple_repeat Simple_repeat 2 38 0 232 393 17 38 chr5 38365229 38365519 -164720013 - L2 LINE L2 -475 2839 2556 1340 160 43 43 chr5 38366454 38366735 -164718797 - MSTB1 LTR MaLR 0 432 152 1865 167 0 0 chr5 38367934 38368239 -164717293 + AluSx SINE Alu 5 309 -3 2156 96 3 7 chr5 38368495 38368788 -164716744 - AluSg SINE Alu -18 292 1 31 26 0 0 chr5 38368832 38368870 -164716662 + AT_rich Low_complexity Low_complexity 1 38 0 512 283 168 23 chr5 38369862 38370035 -164715497 - MER58A DNA MER1_type -18 206 9 496 251 153 14 chr5 38370340 38370581 -164714951 + MLT1G LTR MaLR 14 249 -341 1006 197 46 115 chr5 38370726 38371117 -164714415 + MLT1A1 LTR MaLR 2 365 0 1175 118 0 12 chr5 38371144 38371314 -164714218 - AluSc SINE Alu -2 307 140 345 279 8 41 chr5 38371315 38371437 -164714095 + MLT1H1 LTR MaLR 438 555 0 195 293 58 92 chr5 38371592 38371766 -164713766 + L2 LINE L2 2327 2494 -820 268 339 132 28 chr5 38373101 38373390 -164712142 + L3 LINE CR1 843 1161 -416 224 335 114 18 chr5 38376383 38376610 -164708922 - MIR SINE MIR -13 249 1 22 0 0 0 chr5 38376709 38376731 -164708801 + AT_rich Low_complexity Low_complexity 1 22 0 243 313 75 34 chr5 38377017 38377164 -164708368 - MIR SINE MIR -10 252 100 22 0 0 0 chr5 38377249 38377271 -164708261 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 38377549 38377584 -164707948 + AT_rich Low_complexity Low_complexity 1 35 0 777 125 23 0 chr5 38377603 38377731 -164707801 - L1PA15 LINE L1 -1 6164 6034 203 95 48 0 chr5 38377731 38377773 -164707759 + T-rich Low_complexity Low_complexity 1 44 0 1667 196 0 10 chr5 38377773 38378085 -164707447 - AluJb SINE Alu -3 309 1 26 64 0 0 chr5 38378544 38378591 -164706941 + AT_rich Low_complexity Low_complexity 1 47 0 1252 68 6 0 chr5 38378890 38379052 -164706480 - L1PA12 LINE L1 -178 5990 5828 1290 107 25 0 chr5 38379052 38379246 -164706286 + L1PA12 LINE L1 5967 6167 -1 2358 69 10 10 chr5 38379251 38379556 -164705976 + AluY SINE Alu 3 307 -4 505 228 74 20 chr5 38379695 38379844 -164705688 - MIR SINE MIR -58 204 48 22 56 0 0 chr5 38379865 38379901 -164705631 + AT_rich Low_complexity Low_complexity 1 36 0 364 250 23 11 chr5 38379906 38379994 -164705538 + L1PA14 LINE L1 1 89 -7492 7932 18 7 1 chr5 38380002 38381086 -164704446 - L1HS LINE L1 0 6155 5060 414 39 0 0 chr5 38381572 38381624 -164703908 + (CA)n Simple_repeat Simple_repeat 2 53 0 4195 202 31 2 chr5 38381918 38382845 -164702687 + L1MC1 LINE L1 5181 6130 -203 23 54 0 0 chr5 38383684 38383721 -164701811 + AT_rich Low_complexity Low_complexity 1 37 0 260 311 0 0 chr5 38384036 38384097 -164701435 - MER5A DNA MER1_type -122 67 7 21 0 0 0 chr5 38384269 38384290 -164701242 + AT_rich Low_complexity Low_complexity 1 21 0 7968 23 3 0 chr5 38384616 38385576 -164699956 - L1P LINE L1 -758 5388 4426 * 8478 27 0 0 chr5 38385573 38386573 -164698959 + L1P LINE L1 3389 4388 -1758 9781 204 43 114 chr5 38386575 38390004 -164695528 + L1PA14 LINE L1 83 3288 -4296 * 11821 215 22 4 chr5 38389998 38392608 -164692924 + L1PA14 LINE L1 3753 6410 -1174 3552 131 23 70 chr5 38392601 38393348 -164692184 + L1PA14 LINE L1 6644 7355 -244 * 516 96 24 0 chr5 38393486 38393569 -164691963 - L1PA5 LINE L1 -5 6149 6065 1620 129 0 35 chr5 38394194 38394485 -164691047 - AluSx SINE Alu 0 317 36 715 367 46 26 chr5 38394676 38395216 -164690316 - HERVL LTR ERVL -3424 2230 1680 180 0 0 0 chr5 38395216 38395236 -164690296 + (TTG)n Simple_repeat Simple_repeat 3 22 0 446 363 23 33 chr5 38395607 38396001 -164689531 - HERVL LTR ERVL -4358 1296 907 2112 117 0 52 chr5 38396282 38396608 -164688924 - AluSc SINE Alu 0 309 1 391 232 293 0 chr5 38397011 38397175 -164688357 - LTR50 LTR ERVL -4 791 580 729 268 206 5 chr5 38397360 38397748 -164687784 - LTR50 LTR ERVL -329 466 1 326 320 80 7 chr5 38397977 38398127 -164687405 - MIR SINE MIR -34 228 68 3142 194 31 16 chr5 38399253 38399274 -164686258 + L1MC2 LINE L1 5588 5607 -737 1892 104 41 4 chr5 38399274 38399573 -164685959 + AluSg SINE Alu 1 309 0 3142 194 31 16 chr5 38399573 38400287 -164685245 + L1MC2 LINE L1 5607 6335 -9 21 0 0 0 chr5 38402307 38402328 -164683204 + AT_rich Low_complexity Low_complexity 1 21 0 600 114 23 0 chr5 38403740 38403871 -164681661 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 36 0 0 chr5 38403881 38403909 -164681623 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr5 38404137 38404175 -164681357 + AT_rich Low_complexity Low_complexity 1 38 0 273 182 0 0 chr5 38405687 38405742 -164679790 + CT-rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr5 38406875 38406903 -164678629 + AT_rich Low_complexity Low_complexity 1 28 0 186 229 21 21 chr5 38407027 38407075 -164678457 - L2 LINE L2 0 3313 3266 369 283 78 54 chr5 38407922 38408127 -164677405 + L2 LINE L2 3099 3308 -5 241 304 104 9 chr5 38408203 38408318 -164677214 - MIR SINE MIR -65 197 72 3716 199 49 39 chr5 38408465 38409318 -164676214 + L1MB3 LINE L1 6 870 -5514 216 0 0 0 chr5 38409318 38409342 -164676190 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3716 199 49 39 chr5 38409342 38409389 -164676143 + L1MB3 LINE L1 870 915 -5469 205 297 93 25 chr5 38409429 38409547 -164675985 + MIR SINE MIR 72 197 -65 6350 189 56 43 chr5 38409669 38411703 -164673829 + L1MB3 LINE L1 923 2978 -3404 2931 275 112 16 chr5 38411724 38411878 -164673654 + L1MB3 LINE L1 3164 3302 -3080 2267 77 0 7 chr5 38411878 38412178 -164673354 + AluY SINE Alu 1 298 -13 2931 275 112 16 chr5 38412178 38413726 -164671806 + L1MB3 LINE L1 3302 5033 -1349 243 0 0 0 chr5 38413726 38413753 -164671779 + (TG)n Simple_repeat Simple_repeat 2 28 0 241 83 0 0 chr5 38413774 38413822 -164671710 - LTR66 LTR ERVL -169 441 394 26 0 0 0 chr5 38413951 38413977 -164671555 + AT_rich Low_complexity Low_complexity 1 26 0 3646 197 13 23 chr5 38414262 38415191 -164670341 + L1MB3 LINE L1 5325 6247 -172 22 0 0 0 chr5 38415932 38415954 -164669578 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr5 38416115 38416139 -164669393 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2606 91 3 5 chr5 38416414 38416786 -164668746 + L1PA8 LINE L1 5800 6170 -2 24 0 0 0 chr5 38418332 38418356 -164667176 + AT_rich Low_complexity Low_complexity 1 24 0 2166 115 0 3 chr5 38418401 38418713 -164666819 - AluSx SINE Alu -1 311 1 246 305 92 28 chr5 38419729 38419870 -164665662 + LTR67 LTR ERVL 400 549 -8 223 280 0 0 chr5 38421621 38421671 -164663861 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 332 240 37 0 chr5 38421672 38421781 -164663751 - L1MC4 LINE L1 -1139 6646 6570 186 189 0 0 chr5 38421783 38421820 -164663712 + (TA)n Simple_repeat Simple_repeat 1 37 0 247 154 5 0 chr5 38423568 38423643 -164661889 - LTR66 LTR ERVL 0 520 394 305 214 0 14 chr5 38423643 38423713 -164661819 - L1MCa LINE L1 -4363 2063 1995 25 51 0 0 chr5 38423782 38423821 -164661711 + AT_rich Low_complexity Low_complexity 1 39 0 369 0 0 0 chr5 38423821 38423862 -164661670 + (CA)n Simple_repeat Simple_repeat 2 42 0 1007 193 115 81 chr5 38423862 38424001 -164661531 - MLT2C1 LTR ERVL -65 332 199 432 0 0 0 chr5 38424001 38424049 -164661483 + (TG)n Simple_repeat Simple_repeat 1 48 0 1007 193 115 81 chr5 38424049 38424230 -164661302 - MLT2C1 LTR ERVL -198 199 1 1053 196 121 12 chr5 38424486 38424726 -164660806 - MLT1C LTR MaLR -201 266 1 1722 100 34 4 chr5 38424794 38425063 -164660469 - L1PA10 LINE L1 -5 6163 5887 273 154 0 19 chr5 38425474 38425526 -164660006 + LTR22 LTR ERVK 3 53 -527 * 1518 206 48 6 chr5 38425504 38425839 -164659693 + LTR22 LTR ERVK 161 509 -71 237 297 11 11 chr5 38426090 38426181 -164659351 + GA-rich Low_complexity Low_complexity 2 92 0 617 291 74 14 chr5 38426359 38427006 -164658526 + L1ME3 LINE L1 5440 6161 -1 361 239 132 129 chr5 38427040 38427435 -164658097 + MER20B DNA MER1_type 315 713 -70 2236 147 23 52 chr5 38427435 38427876 -164657656 + MSTA LTR MaLR 1 428 0 361 239 132 129 chr5 38427876 38427944 -164657588 + MER20B DNA MER1_type 713 779 -4 302 342 83 19 chr5 38427959 38428225 -164657307 - L2 LINE L2 -65 3248 2966 189 0 0 0 chr5 38430139 38430160 -164655372 + (A)n Simple_repeat Simple_repeat 1 21 0 369 248 23 54 chr5 38430336 38430465 -164655067 - L2 LINE L2 -12 3301 3177 863 192 26 0 chr5 38430480 38430673 -164654859 + L1PBa LINE L1 3 200 -6663 9114 127 16 3 chr5 38430675 38432765 -164652767 + L1PBa LINE L1 636 2940 -3923 404 176 0 0 chr5 38432765 38432839 -164652693 + AluJ/FRAM SINE Alu 229 302 0 261 341 55 0 chr5 38432912 38433003 -164652529 + HAL1 LINE L1 588 683 -1824 800 239 101 5 chr5 38433004 38433213 -164652319 + MLT1E2 LTR MaLR 5 233 -393 26 0 0 0 chr5 38433213 38433239 -164652293 + AT_rich Low_complexity Low_complexity 1 26 0 378 351 62 28 chr5 38433286 38433639 -164651893 + HAL1 LINE L1 743 1107 -1400 313 274 48 8 chr5 38433702 38433826 -164651706 + HAL1 LINE L1 1260 1388 -1119 996 242 239 46 chr5 38433911 38434401 -164651131 + MLT1E1 LTR MaLR 5 612 -42 2365 81 3 0 chr5 38434401 38434699 -164650833 - AluY SINE Alu -12 299 1 996 242 239 46 chr5 38434699 38434753 -164650779 + MLT1E1 LTR MaLR 612 654 0 263 267 0 13 chr5 38435341 38435416 -164650116 + MLT1I LTR MaLR 118 191 -218 247 240 40 13 chr5 38435568 38435643 -164649889 + MLT1I LTR MaLR 320 396 -13 1440 239 48 50 chr5 38435913 38436411 -164649121 + MLT1D LTR MaLR 1 497 -8 993 233 42 58 chr5 38436471 38436784 -164648748 + MLT1E2 LTR MaLR 311 618 -8 265 207 167 66 chr5 38436816 38437014 -164648518 - HAL1 LINE L1 -292 2215 1998 350 339 89 26 chr5 38437222 38437526 -164648006 - HAL1 LINE L1 -811 1696 1374 643 330 109 50 chr5 38437777 38438235 -164647297 + L2 LINE L2 2829 3313 0 303 355 93 17 chr5 38438250 38438422 -164647110 - HAL1 LINE L1 -1680 827 643 21 36 0 0 chr5 38439210 38439238 -164646294 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 38440570 38440602 -164644930 + AT_rich Low_complexity Low_complexity 1 32 0 225 254 34 17 chr5 38440811 38440870 -164644662 + MLT1E LTR MaLR 3 62 -562 992 274 69 29 chr5 38440953 38441332 -164644200 + MLT1E LTR MaLR 200 593 0 3667 93 309 0 chr5 38441944 38442575 -164642957 - LTR12 LTR ERV1 0 826 1 1750 155 17 0 chr5 38443028 38443325 -164642207 - AluSq SINE Alu -11 302 1 1014 206 14 37 chr5 38444036 38444238 -164641294 + MER58A DNA MER1_type 12 210 -2210 2466 58 0 0 chr5 38444238 38444533 -164640999 + AluY SINE Alu 1 295 -16 1014 206 14 37 chr5 38444533 38444548 -164640984 + MER58A DNA MER1_type 210 224 0 23 0 0 0 chr5 38445022 38445045 -164640487 + AT_rich Low_complexity Low_complexity 1 23 0 256 273 122 50 chr5 38445280 38445419 -164640113 - LTR1B LTR ERV1 -74 752 604 * 2005 102 14 7 chr5 38445416 38445709 -164639823 + THE1B LTR MaLR 70 364 0 315 225 8 100 chr5 38445709 38445829 -164639703 + MER67C LTR ERV1 295 403 -307 2406 41 41 3 chr5 38446093 38446385 -164639147 + AluY SINE Alu 1 303 -8 25 51 0 0 chr5 38446690 38446729 -164638803 + AT_rich Low_complexity Low_complexity 1 39 0 1884 280 63 3 chr5 38446980 38447569 -164637963 - MLT1E2 LTR MaLR 0 626 3 27 29 0 0 chr5 38448536 38448570 -164636962 + AT_rich Low_complexity Low_complexity 1 34 0 226 226 38 0 chr5 38450308 38450361 -164635171 - L1MD3 LINE L1 -1328 6667 6613 216 0 0 0 chr5 38450407 38450431 -164635101 + (TA)n Simple_repeat Simple_repeat 1 24 0 869 237 14 3 chr5 38451079 38451353 -164634179 - MER74C LTR ERVL -20 440 88 540 293 142 13 chr5 38451349 38451588 -164633944 + MLT2B1 LTR ERVL 157 426 -94 * 4701 30 4 0 chr5 38451745 38452335 -164633197 + L1PA3 LINE L1 5585 6176 0 25 65 0 0 chr5 38452782 38452828 -164632704 + AT_rich Low_complexity Low_complexity 1 46 0 279 252 34 50 chr5 38453627 38453746 -164631786 + MLT1J1 LTR MaLR 286 402 -44 1503 181 10 45 chr5 38454044 38454358 -164631174 + AluJb SINE Alu 1 303 -9 389 274 27 41 chr5 38454470 38454616 -164630916 - MIR SINE MIR -11 251 108 1547 193 94 23 chr5 38454616 38454968 -164630564 + MLT1B LTR MaLR 1 377 -13 199 246 0 18 chr5 38455004 38455061 -164630471 - MIR SINE MIR -150 112 57 2196 137 0 0 chr5 38455844 38456151 -164629381 + AluSc SINE Alu 1 307 -2 2362 141 6 3 chr5 38456746 38457109 -164628423 - THE1B LTR MaLR 0 364 1 9793 124 49 5 chr5 38457110 38458596 -164626936 - THE1B-int LTR MaLR -28 1552 1 2436 125 5 16 chr5 38458596 38458964 -164626568 - THE1B LTR MaLR 0 364 1 522 299 28 6 chr5 38459259 38459436 -164626096 + MER20 DNA MER1_type 4 184 -35 435 198 8 16 chr5 38460426 38460552 -164624980 + GA-rich Low_complexity Low_complexity 3 127 0 195 186 0 0 chr5 38460706 38460749 -164624783 + GA-rich Low_complexity Low_complexity 2 44 0 2068 70 21 3 chr5 38460787 38461071 -164624461 - L1PA7 LINE L1 -3 6151 5863 2630 257 187 40 chr5 38462096 38463307 -164622225 + L1M2b LINE L1 1 1388 -5821 238 356 58 0 chr5 38464005 38464109 -164621423 + L1M2b LINE L1 1216 1325 -5884 7758 219 63 22 chr5 38464109 38466785 -164618747 + L1M2 LINE L1 787 3574 -3274 9953 199 73 24 chr5 38566793 38567665 -164517867 + L1MC1 LINE L1 50 878 -5548 419 122 61 0 chr5 38567665 38567747 -164517785 - L1PA13 LINE L1 -1 6162 6076 9953 199 73 24 chr5 38567747 38569452 -164516080 + L1MC1 LINE L1 878 2772 -3654 242 129 24 5 chr5 38569460 38569512 -164516020 - THE1A LTR MaLR -259 96 45 1179 247 11 39 chr5 38569553 38569913 -164515619 + L1MC1 LINE L1 4796 5145 -1281 1783 223 49 22 chr5 38569924 38569983 -164515549 - MSTB1 LTR MaLR -13 419 363 1916 154 36 36 chr5 38569983 38570347 -164515185 - THE1B LTR MaLR 0 364 1 1783 223 49 22 chr5 38570347 38570695 -164514837 - MSTB1 LTR MaLR -69 363 1 4542 189 64 36 chr5 38570704 38571480 -164514052 + L1MC1 LINE L1 5151 5986 -627 1846 191 57 24 chr5 38571480 38571898 -164513634 - MSTB1 LTR MaLR 0 432 1 4542 189 64 36 chr5 38571898 38572545 -164512987 + L1MC1 LINE L1 5986 6613 0 448 283 194 35 chr5 38573254 38573621 -164511911 - L2 LINE L2 0 3313 2889 26 30 0 0 chr5 38573702 38573735 -164511797 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 38574483 38574506 -164511026 + AT_rich Low_complexity Low_complexity 1 23 0 1421 128 0 0 chr5 38576015 38576226 -164509306 + AluSp SINE Alu 101 311 -2 23 86 0 0 chr5 38576368 38576426 -164509106 + AT_rich Low_complexity Low_complexity 1 58 0 958 65 16 0 chr5 38578584 38578708 -164506824 - AluSg/x SINE Alu -15 295 170 226 291 23 23 chr5 38579215 38579301 -164506231 - MLT1J2 LTR MaLR -22 428 343 225 0 0 0 chr5 38580155 38580180 -164505352 + (T)n Simple_repeat Simple_repeat 1 25 0 2257 195 71 0 chr5 38580212 38580632 -164504900 + MER70A LTR ERVL 22 471 -1 441 282 53 24 chr5 38581404 38581574 -164503958 - MLT1J2 LTR MaLR -237 213 39 261 111 0 0 chr5 38583348 38583384 -164502148 - MLT2B1 LTR ERVL 0 520 485 2341 159 18 30 chr5 38583496 38583935 -164501597 + Tigger2a DNA MER2_type 1 434 0 1252 238 141 22 chr5 38583935 38584187 -164501345 - MLT2B1 LTR ERVL -67 453 232 2285 102 0 0 chr5 38584187 38584482 -164501050 + AluSq SINE Alu 3 297 -16 1252 238 141 22 chr5 38584482 38584632 -164500900 - MLT2B1 LTR ERVL -288 232 3 1048 248 128 19 chr5 38584690 38585265 -164500267 - MER45B DNA AcHobo -10 1030 310 2612 195 7 36 chr5 38585265 38585814 -164499718 + Tigger1 DNA MER2_type 1 533 -1885 1982 155 28 11 chr5 38585814 38586169 -164499363 + Tigger1 DNA MER2_type 755 1115 -1303 11569 213 41 19 chr5 38586179 38589893 -164495639 + L1MC/D LINE L1 2245 5877 -1065 2268 82 3 0 chr5 38589893 38590185 -164495347 + AluY SINE Alu 1 293 -18 11569 213 41 19 chr5 38590185 38590296 -164495236 + L1MC/D LINE L1 5877 5984 -958 1840 201 12 12 chr5 38590296 38590332 -164495200 + L1MA5 LINE L1 5894 5929 -371 264 91 0 0 chr5 38590332 38590376 -164495156 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1840 201 12 12 chr5 38590376 38590736 -164494796 + L1MA5 LINE L1 5928 6300 0 11569 213 41 19 chr5 38590736 38590758 -164494774 + L1MC/D LINE L1 5984 6199 -743 21 36 0 0 chr5 38591316 38591344 -164494188 + AT_rich Low_complexity Low_complexity 1 28 0 2028 100 21 3 chr5 38592089 38592379 -164493153 + AluSg SINE Alu 1 295 -15 1612 187 101 61 chr5 38593358 38593834 -164491698 - MER50 LTR ERV1 0 734 240 245 157 20 39 chr5 38593944 38593995 -164491537 - MER50 LTR ERV1 -675 59 10 1587 158 55 68 chr5 38594524 38594904 -164490628 + THE1C LTR MaLR 1 375 0 27 49 0 0 chr5 38596206 38596247 -164489285 + AT_rich Low_complexity Low_complexity 1 41 0 2239 77 7 13 chr5 38597214 38597512 -164488020 - AluY SINE Alu -15 296 1 2149 187 9 18 chr5 38597552 38597990 -164487542 + Tigger2a DNA MER2_type 1 434 0 437 227 42 155 chr5 38598104 38598505 -164487027 - L1MD3 LINE L1 -10 7985 7630 2014 125 4 4 chr5 38599424 38599725 -164485807 + AluSc SINE Alu 1 301 0 23 0 0 0 chr5 38599826 38599849 -164485683 + AT_rich Low_complexity Low_complexity 1 23 0 310 294 55 18 chr5 38600047 38600210 -164485322 - L1ME1 LINE L1 -15 6151 5983 838 227 0 0 chr5 38600254 38600417 -164485115 + MLT1A1 LTR MaLR 1 163 -202 1424 212 90 113 chr5 38600419 38600986 -164484546 + MLT2B3 LTR ERVL 1 554 0 1188 177 10 5 chr5 38600986 38601188 -164484344 + MLT1A1 LTR MaLR 161 363 -2 599 294 50 23 chr5 38601188 38601743 -164483789 - L1ME1 LINE L1 -224 5942 5345 376 282 86 6 chr5 38601781 38601955 -164483577 - L1ME1 LINE L1 -861 5285 5098 316 181 42 14 chr5 38601972 38602044 -164483488 + MLT1B LTR MaLR 308 381 -9 29 60 0 0 chr5 38602197 38602247 -164483285 + AT_rich Low_complexity Low_complexity 1 50 0 1581 196 92 11 chr5 38602739 38603086 -164482446 + THE1C LTR MaLR 1 375 0 1761 218 3 0 chr5 38603615 38603936 -164481596 - MLT2B2 LTR ERVL -193 322 1 617 258 81 25 chr5 38603959 38604242 -164481290 + L1ME1 LINE L1 5765 6063 -103 24 32 0 0 chr5 38605413 38605444 -164480088 + AT_rich Low_complexity Low_complexity 1 31 0 229 271 71 0 chr5 38607487 38607572 -164477960 + L1ME LINE L1 5690 5780 -341 23 54 0 0 chr5 38607636 38607673 -164477859 + AT_rich Low_complexity Low_complexity 1 37 0 231 61 0 0 chr5 38607722 38607755 -164477777 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 618 131 0 10 chr5 38607766 38607865 -164477667 + MSTA LTR MaLR 1 98 -328 2285 79 41 0 chr5 38607877 38608169 -164477363 - AluY SINE Alu -2 309 6 2181 143 20 17 chr5 38608177 38608535 -164476997 - THE1B LTR MaLR -5 359 1 5423 106 1 5 chr5 38608535 38609272 -164476260 - THE1B-int LTR MaLR 0 1580 847 4682 92 1 44 chr5 38609272 38609970 -164475562 - THE1B-int LTR MaLR -910 670 3 2013 141 33 28 chr5 38609972 38610334 -164475198 - THE1B LTR MaLR 0 364 1 1554 195 14 17 chr5 38610351 38610648 -164474884 + MSTA LTR MaLR 133 428 0 8364 179 33 36 chr5 38610656 38611011 -164474521 + MSTA-int LTR MaLR 10 365 -1286 2330 86 3 3 chr5 38611011 38611303 -164474229 - AluY SINE Alu -19 292 1 8364 179 33 36 chr5 38611303 38612594 -164472938 + MSTA-int LTR MaLR 365 1651 0 2121 173 58 15 chr5 38612594 38613004 -164472528 + MSTA LTR MaLR 1 428 0 204 163 0 0 chr5 38613045 38613088 -164472444 + (CA)n Simple_repeat Simple_repeat 1 43 0 1536 256 66 41 chr5 38613121 38613428 -164472104 + L1ME2 LINE L1 5298 5596 -568 1983 218 31 12 chr5 38613428 38613851 -164471681 + MSTB1 LTR MaLR 1 431 -1 1536 256 66 41 chr5 38613851 38614378 -164471154 + L1ME2 LINE L1 5596 6153 -11 276 233 17 0 chr5 38616301 38616361 -164469171 - MIR SINE MIR -135 127 67 2012 101 0 7 chr5 38617267 38617615 -164467917 - AluSc SINE Alu 0 352 7 1620 110 0 0 chr5 38618107 38618325 -164467207 - AluSq SINE Alu -95 218 1 2334 171 20 22 chr5 38618535 38619032 -164466500 - L1MB3 LINE L1 -3 6180 5685 22 35 0 0 chr5 38619491 38619520 -164466012 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 38620908 38620948 -164464584 + AT_rich Low_complexity Low_complexity 1 40 0 1938 143 48 28 chr5 38621290 38621647 -164463885 - THE1B LTR MaLR 0 364 1 10344 121 31 5 chr5 38621647 38623181 -164462351 - THE1C-int LTR MaLR 0 1580 6 2104 127 38 24 chr5 38623186 38623556 -164461976 - THE1C LTR MaLR 0 375 1 251 383 86 0 chr5 38624344 38624506 -164461026 + L2 LINE L2 1846 2021 -1293 321 315 0 22 chr5 38625230 38625322 -164460210 - L2 LINE L2 -33 3280 3191 2531 46 3 3 chr5 38625950 38626257 -164459275 - AluY SINE Alu -4 307 1 358 200 3 16 chr5 38626619 38626702 -164458830 + MER21A LTR ERV1 1 83 -780 453 197 16 88 chr5 38626803 38626987 -164458545 + MER21A LTR ERV1 74 310 -397 1218 169 35 28 chr5 38626992 38627247 -164458285 + MLT2A2 LTR ERVL 1 257 -196 1823 126 11 8 chr5 38627267 38627528 -164458004 - AluSx SINE Alu -45 267 6 756 244 122 13 chr5 38627559 38627788 -164457744 + MLT2B3 LTR ERVL 255 508 -46 2852 209 13 107 chr5 38627861 38628684 -164456848 + MER21A LTR ERV1 159 904 -27 2676 109 41 5 chr5 38628718 38629130 -164456402 + MSTA LTR MaLR 1 427 -1 210 324 29 37 chr5 38630162 38630298 -164455234 - MER5A DNA MER1_type -23 166 32 4401 130 3 31 chr5 38630351 38630998 -164454534 - L1PA12 LINE L1 0 6168 5573 1896 159 23 0 chr5 38630998 38631124 -164454408 + AluSx SINE Alu 1 123 -189 450 0 0 0 chr5 38631124 38631174 -164454358 + (CA)n Simple_repeat Simple_repeat 2 51 0 1896 159 23 0 chr5 38631174 38631349 -164454183 + AluSx SINE Alu 123 309 -3 4401 130 3 31 chr5 38631349 38631552 -164453980 - L1PA12 LINE L1 -595 5573 5366 2292 184 0 0 chr5 38631557 38631976 -164453556 + L1P LINE L1 4462 4880 -1266 1694 183 7 90 chr5 38632263 38632621 -164452911 - MLT2C1 LTR ERVL -1 396 79 1939 149 0 3 chr5 38632621 38632916 -164452616 - AluSq SINE Alu -19 294 1 1694 183 7 90 chr5 38632916 38632989 -164452543 - MLT2C1 LTR ERVL -318 79 1 868 148 14 32 chr5 38633665 38634013 -164451519 + ERVL-D LTR ERVL 5270 5757 0 1776 174 21 72 chr5 38634013 38634444 -164451088 + MLT2D LTR ERVL 1 409 -5 23 0 0 0 chr5 38636438 38636461 -164449071 + AT_rich Low_complexity Low_complexity 1 23 0 1372 269 111 39 chr5 38637033 38637938 -164447594 - L1ME3 LINE L1 -55 6107 5134 1796 305 72 4 chr5 38637966 38638704 -164446828 - L1ME1 LINE L1 -5 6161 5374 2026 150 46 9 chr5 38688942 38689289 -164396243 - THE1-int LTR MaLR -259 1321 962 1483 224 57 5 chr5 38689725 38690108 -164395424 + MLT1C LTR MaLR 65 467 0 399 227 93 47 chr5 38690108 38690257 -164395275 - MARNA DNA Mariner -118 468 313 2484 111 6 0 chr5 38690270 38690623 -164394909 - THE1A LTR MaLR 0 355 1 2165 131 0 3 chr5 38690658 38690972 -164394560 - AluSq SINE Alu 0 313 1 351 345 47 0 chr5 38691027 38691198 -164394334 - MIR SINE MIR -6 256 78 1787 277 76 34 chr5 38692390 38693263 -164392269 + L1ME3A LINE L1 5257 6165 -5 2179 24 0 0 chr5 38693867 38694121 -164391411 + L1PA2 LINE L1 5902 6155 0 201 111 0 56 chr5 38694345 38694381 -164391151 + (TAG)n Simple_repeat Simple_repeat 1 34 0 471 268 166 29 chr5 38694449 38694763 -164390769 + L1MCc LINE L1 1162 1518 -4905 290 297 65 38 chr5 38695096 38695493 -164390039 + L1MCc LINE L1 1961 2368 -4754 24 67 0 0 chr5 38695625 38695670 -164389862 + AT_rich Low_complexity Low_complexity 1 45 0 317 153 34 0 chr5 38696475 38696534 -164388998 - L1M4 LINE L1 -3124 3022 2962 1471 98 5 0 chr5 38697017 38697232 -164388300 - L1P LINE L1 -3368 2778 2563 922 208 84 60 chr5 38697564 38697848 -164387684 - MLT1B LTR MaLR -89 301 11 709 275 66 24 chr5 38698084 38698548 -164386984 + L1MCc LINE L1 2839 3286 -3655 1580 309 77 17 chr5 38698551 38699882 -164385650 + L1MCc LINE L1 3868 5278 -1663 802 241 19 11 chr5 38699891 38700207 -164385325 + MLT1A1 LTR MaLR 1 365 0 735 311 102 33 chr5 38700207 38700806 -164384726 + L1MCc LINE L1 5286 5925 -1016 273 167 69 14 chr5 38700909 38700981 -164384551 + L1ME LINE L1 5665 5740 -426 2763 133 28 7 chr5 38701006 38701402 -164384130 + MLT2A1 LTR ERVL 1 408 -36 315 0 0 0 chr5 38701402 38701437 -164384095 + (CA)n Simple_repeat Simple_repeat 2 36 0 2763 133 28 7 chr5 38701437 38701475 -164384057 + MLT2A1 LTR ERVL 408 444 0 30593 83 8 3 chr5 38701487 38705510 -164380022 + HERVL-A1 LTR ERVL 2 4044 -1610 1690 209 31 38 chr5 38705735 38706152 -164379380 - MER47B DNA MER2_type -4 414 1 195 299 45 15 chr5 38706314 38706381 -164379151 - L2 LINE L2 0 3313 3245 1982 238 51 9 chr5 38706665 38707118 -164378414 + MER70A LTR ERVL 1 472 0 344 286 77 0 chr5 38707216 38707307 -164378225 - MER58A DNA MER1_type -5 102 5 199 288 12 12 chr5 38707333 38707413 -164378119 - MER5C DNA MER1_type -46 278 199 1428 97 15 0 chr5 38707813 38708019 -164377513 - L1PA7 LINE L1 -2 6152 5944 1536 152 17 0 chr5 38708148 38708385 -164377147 + AluSg SINE Alu 54 294 -16 21 0 0 0 chr5 38708640 38708661 -164376871 + AT_rich Low_complexity Low_complexity 1 21 0 342 263 93 8 chr5 38709198 38709316 -164376216 + L2 LINE L2 3169 3296 -17 214 296 63 42 chr5 38710174 38710271 -164375261 + L2 LINE L2 3164 3266 -47 2104 122 3 7 chr5 38710271 38710575 -164374957 + AluSq SINE Alu 1 303 -10 214 296 63 42 chr5 38710575 38710619 -164374913 + L2 LINE L2 3266 3308 -5 1942 141 11 0 chr5 38710663 38710960 -164374572 + AluSx SINE Alu 3 302 0 305 295 36 27 chr5 38711279 38711391 -164374141 - MIR SINE MIR -63 145 33 922 299 103 19 chr5 38711395 38712025 -164373507 + L2 LINE L2 2523 3223 -90 717 214 0 8 chr5 38712094 38712225 -164373307 - FLAM_A SINE Alu -3 130 1 451 240 99 24 chr5 38712456 38712732 -164372800 + L1MC/D LINE L1 5545 5852 -299 2443 174 41 30 chr5 38712808 38713534 -164371998 + L1M4 LINE L1 4927 5666 -508 1596 167 36 14 chr5 38713534 38713834 -164371698 - AluJb SINE Alu 0 306 1 2443 174 41 30 chr5 38713834 38713984 -164371548 + L1M4 LINE L1 5666 5813 -361 18886 139 19 89 chr5 38714346 38718396 -164367136 - L1P LINE L1 -2366 3780 12 22 35 0 0 chr5 38719779 38719808 -164365724 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr5 38720047 38720093 -164365439 + AT_rich Low_complexity Low_complexity 1 46 0 780 22 0 0 chr5 38720175 38720267 -164365265 + L1PA7 LINE L1 6060 6151 -3 25 0 0 0 chr5 38720893 38720918 -164364614 + AT_rich Low_complexity Low_complexity 1 25 0 239 212 76 15 chr5 38722556 38722622 -164362910 + L1M4 LINE L1 5739 5808 -366 2631 205 68 31 chr5 38722838 38723478 -164362054 + L1MB8 LINE L1 5431 6101 -77 1450 175 33 75 chr5 38723478 38723838 -164361694 + MER7A DNA MER2_type 4 346 0 2631 205 68 31 chr5 38723838 38723903 -164361629 + L1MB8 LINE L1 6101 6162 -16 230 140 0 20 chr5 38723912 38723962 -164361570 - LTR66 LTR ERVL -172 438 390 23 33 0 0 chr5 38724657 38724687 -164360845 + AT_rich Low_complexity Low_complexity 1 30 0 414 69 0 0 chr5 38725213 38725271 -164360261 + (GA)n Simple_repeat Simple_repeat 2 59 0 11430 150 104 32 chr5 38725271 38725332 -164360200 - Tigger1 DNA MER2_type -1 2417 2362 2653 52 0 0 chr5 38725332 38725640 -164359892 - AluY SINE Alu -2 309 2 11430 150 104 32 chr5 38725640 38725668 -164359864 - Tigger1 DNA MER2_type -56 2362 2337 1839 181 29 54 chr5 38725668 38726111 -164359421 + MSTB1 LTR MaLR 1 432 0 11430 150 104 32 chr5 38726111 38726901 -164358631 - Tigger1 DNA MER2_type -81 2337 1605 2017 117 14 3 chr5 38726901 38727184 -164358348 + AluSx SINE Alu 1 286 -26 11430 150 104 32 chr5 38727184 38728556 -164356976 - Tigger1 DNA MER2_type -813 1605 2 1630 204 20 52 chr5 38728728 38729131 -164356401 + MLT1B LTR MaLR 1 390 0 4471 216 19 18 chr5 38729733 38730180 -164355352 - L1 LINE L1 -2095 4051 3606 297 0 0 0 chr5 38730180 38730213 -164355319 + (TG)n Simple_repeat Simple_repeat 2 34 0 4471 216 19 18 chr5 38730213 38730892 -164354640 - L1 LINE L1 -2540 3606 2924 2665 81 6 0 chr5 38731339 38731685 -164353847 - THE1A LTR MaLR -2 353 6 10590 116 14 10 chr5 38731690 38733263 -164352269 - THE1A-int LTR MaLR 0 1580 2 283 128 58 0 chr5 38733552 38733638 -164351894 + (TA)n Simple_repeat Simple_repeat 2 92 0 1464 178 96 37 chr5 38734467 38734821 -164350711 + THE1C LTR MaLR 1 375 0 7112 213 24 3 chr5 38734821 38736225 -164349307 + THE1C-int LTR MaLR 1 1433 -218 1885 139 14 3 chr5 38736225 38736513 -164349019 - MER50-int LTR ERV1 -6908 297 7 2170 153 49 8 chr5 38736513 38736880 -164348652 - MER50 LTR ERV1 -12 722 341 1499 164 143 0 chr5 38736885 38737165 -164348367 + L1PA16 LINE L1 5838 6157 -9 880 36 9 0 chr5 38737187 38737299 -164348233 - MLT2C2 LTR ERVL -351 113 1 293 213 83 102 chr5 38737473 38737581 -164347951 - L2 LINE L2 -12 3301 3196 638 264 117 13 chr5 38738184 38738423 -164347109 - LTR16B LTR ERVL -153 311 48 224 109 0 43 chr5 38738686 38738732 -164346800 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 3339 117 17 46 chr5 38739203 38739835 -164345697 - MER4B LTR ERV1 0 779 1 2679 87 90 8 chr5 38740738 38741127 -164344405 + MER4C LTR ERV1 45 465 0 1874 153 94 30 chr5 38741131 38741429 -164344103 + MER4C-int LTR ERV1 2 330 -6268 1474 276 166 94 chr5 38741429 38742048 -164343484 - MER4A LTR ERV1 0 664 1 1874 153 94 30 chr5 38742048 38742121 -164343411 + MER4C-int LTR ERV1 330 397 -6201 228 176 118 44 chr5 38742238 38742306 -164343226 - MER54A LTR ERVL 0 901 829 2905 150 58 53 chr5 38742307 38743268 -164342264 + MER4-int LTR ERV1 1828 2485 -4113 1217 188 57 71 chr5 38742644 38742722 -164342810 + LTR57-int LTR ERVL 988 1066 -4277 * 2258 121 3 0 chr5 38742722 38743029 -164342503 + AluSq SINE Alu 1 308 -5 1217 188 57 71 chr5 38743029 38743317 -164342215 + LTR57-int LTR ERVL 1066 1349 -3994 292 130 0 72 chr5 38743294 38743363 -164342169 + MER4-int LTR ERV1 1764 1827 -4931 * 560 104 42 21 chr5 38743363 38743459 -164342073 + MER4A LTR ERV1 1 98 -566 1732 138 37 39 chr5 38743459 38743800 -164341732 + MER4A LTR ERV1 261 664 0 2735 81 82 57 chr5 38743803 38744304 -164341228 + MER4A-int LTR ERV1 1 562 -6036 3908 139 21 43 chr5 38744317 38745255 -164340277 + MER4-int LTR ERV1 198 1170 -5588 4421 91 57 13 chr5 38745271 38745972 -164339560 + MER4-int LTR ERV1 1764 2495 -4103 1185 162 127 0 chr5 38745972 38746200 -164339332 - LTR8 LTR ERV1 -434 257 1 16154 112 60 35 chr5 38746200 38746392 -164339140 + MER4-int LTR ERV1 1862 2048 -4550 2364 96 0 0 chr5 38746392 38746684 -164338848 - AluSg SINE Alu -18 292 1 16154 112 60 35 chr5 38746684 38748618 -164336914 + MER4-int LTR ERV1 2048 3933 -2665 2248 79 10 14 chr5 38748618 38748909 -164336623 + AluY SINE Alu 5 294 -17 16154 112 60 35 chr5 38748909 38749231 -164336301 + MER4-int LTR ERV1 3933 4246 -2352 2164 118 0 0 chr5 38749231 38749519 -164336013 + AluSx SINE Alu 13 300 -12 16154 112 60 35 chr5 38749519 38750071 -164335461 + MER4-int LTR ERV1 4246 4783 -1815 7868 34 29 2 chr5 38750071 38750945 -164334587 - MER11D LTR ERVK 0 897 1 16154 112 60 35 chr5 38750945 38751120 -164334412 + MER4-int LTR ERV1 4783 6594 -4 478 128 29 69 chr5 38751130 38751232 -164334300 + MER4A LTR ERV1 1 98 -566 1792 144 17 25 chr5 38751232 38751580 -164333952 + MER4A LTR ERV1 261 664 0 1141 119 4 73 chr5 38751580 38751841 -164333691 + MER4E-int LTR ERV1 1824 2066 -4692 * 11961 152 31 42 chr5 38751840 38753660 -164331872 + MER4E-int LTR ERV1 4218 6007 -591 1471 202 14 14 chr5 38753660 38753952 -164331580 + AluJb SINE Alu 1 292 -20 11961 152 31 42 chr5 38753952 38754533 -164330999 + MER4E-int LTR ERV1 6007 6593 -5 2420 80 10 0 chr5 38754546 38754848 -164330684 + AluY SINE Alu 1 305 -6 1579 74 30 89 chr5 38754859 38755128 -164330404 + MER4C LTR ERV1 1 253 -212 1947 143 76 25 chr5 38755129 38755486 -164330046 - THE1C LTR MaLR 0 375 1 4316 194 7 36 chr5 38755490 38756461 -164329071 - THE1-int LTR MaLR -4 1731 711 1897 180 22 23 chr5 38756461 38756854 -164328678 - MLT2A2 LTR ERVL -144 309 1 611 263 26 6 chr5 38756870 38757026 -164328506 + MER69B DNA AcHobo 514 672 -554 2254 188 39 11 chr5 38757026 38757467 -164328065 + MER4E LTR ERV1 1 453 -326 198 0 0 0 chr5 38757467 38757489 -164328043 + (TTA)n Simple_repeat Simple_repeat 3 24 0 38910 88 6 9 chr5 38757489 38763638 -164321894 - L1PA6 LINE L1 -18 6136 11 2023 119 9 47 chr5 38763646 38763989 -164321543 + MER4E LTR ERV1 436 765 -14 2109 148 0 0 chr5 38763989 38764286 -164321246 - AluSx SINE Alu -15 297 1 1741 225 28 33 chr5 38764331 38764789 -164320743 + MLT1C LTR MaLR 10 465 -2 1614 211 51 73 chr5 38764789 38765120 -164320412 + MER69B DNA AcHobo 682 1019 -1507 1860 181 0 0 chr5 38765120 38765423 -164320109 + AluJb SINE Alu 2 304 -8 1614 211 51 73 chr5 38765423 38765472 -164320060 + MER69B DNA AcHobo 1019 1068 -1458 1754 183 18 50 chr5 38765472 38765855 -164319677 - MER93b LTR ERV1 -2 371 1 1614 211 51 73 chr5 38765855 38765869 -164319663 + MER69B DNA AcHobo 1068 1081 -1445 1769 206 90 38 chr5 38765869 38766242 -164319290 + MLT1D LTR MaLR 1 406 -99 2030 122 3 16 chr5 38766242 38766546 -164318986 + AluSx SINE Alu 1 300 -12 1769 206 90 38 chr5 38766546 38766652 -164318880 + MLT1D LTR MaLR 406 505 0 1614 211 51 73 chr5 38766652 38766802 -164318730 + MER69B DNA AcHobo 1081 1216 -10 349 163 0 0 chr5 38767250 38767299 -164318233 + AluSq SINE Alu 9 57 -251 2259 88 0 55 chr5 38767300 38767628 -164317904 + AluY SINE Alu 2 311 0 1658 116 0 29 chr5 38767631 38767872 -164317660 + AluSq SINE Alu 44 277 -36 832 58 33 0 chr5 38767877 38767998 -164317534 + (GAAA)n Simple_repeat Simple_repeat 3 127 0 2277 68 0 0 chr5 38769102 38769406 -164316126 + AluY SINE Alu 1 304 0 1045 142 6 11 chr5 38769455 38769631 -164315901 + AluJb SINE Alu 122 296 -16 1373 185 133 24 chr5 38769889 38770219 -164315313 + MER93b LTR ERV1 6 371 -2 198 71 0 0 chr5 38770493 38770521 -164315011 + (TA)n Simple_repeat Simple_repeat 2 29 0 7044 70 11 2 chr5 38770521 38772113 -164313419 - L1PA7 LINE L1 -3 6151 4548 1260 54 0 0 chr5 38772113 38772261 -164313271 - AluY SINE Alu -12 299 152 27401 114 9 71 chr5 38772261 38777118 -164308414 - L1PA7 LINE L1 -1593 4553 1 2081 124 3 0 chr5 38777146 38777436 -164308096 - AluSx SINE Alu -21 291 1 269 264 100 55 chr5 38777439 38777549 -164307983 - L1MC/D LINE L1 -2124 5684 5570 304 330 29 0 chr5 38777960 38778063 -164307469 - MIR SINE MIR -135 127 22 337 188 109 59 chr5 38778070 38778098 -164307434 - MIR SINE MIR 0 262 237 1583 172 89 56 chr5 38778098 38778435 -164307097 - MER7A DNA MER2_type 0 346 1 337 188 109 59 chr5 38778435 38778507 -164307025 - MIR SINE MIR -25 237 157 876 235 79 20 chr5 38778507 38778792 -164306740 - LTR16C LTR ERVL -2 481 193 470 244 87 8 chr5 38778965 38779092 -164306440 - MIR SINE MIR -122 140 4 259 217 121 0 chr5 38779271 38779354 -164306178 - MER5A DNA MER1_type 0 189 97 484 133 10 20 chr5 38779796 38779894 -164305638 + CT-rich Low_complexity Low_complexity 3 99 0 641 186 0 0 chr5 38779897 38779999 -164305533 - FLAM_A SINE Alu -20 122 21 298 222 42 0 chr5 38780023 38780095 -164305437 - MER5A DNA MER1_type -80 109 35 292 196 98 54 chr5 38780691 38780783 -164304749 - L2 LINE L2 -7 3306 3211 327 150 0 0 chr5 38780807 38780867 -164304665 + (TG)n Simple_repeat Simple_repeat 1 60 0 1149 249 52 64 chr5 38781712 38782246 -164303286 + PABL_B LTR ERV1 1 667 0 2324 97 0 13 chr5 38782674 38782974 -164302558 + AluSx SINE Alu 1 296 -16 2827 102 11 5 chr5 38783466 38783839 -164301693 - THE1C LTR MaLR 0 375 1 209 259 0 0 chr5 38783978 38784032 -164301500 - MIR SINE MIR -105 157 104 437 266 54 58 chr5 38784223 38784457 -164301075 - L1M4 LINE L1 -1300 4846 4612 2218 106 17 0 chr5 38784457 38784758 -164300774 + AluSp SINE Alu 1 306 -7 437 266 54 58 chr5 38784758 38784782 -164300750 - L1M4 LINE L1 -1534 4612 4589 1844 151 3 19 chr5 38784815 38785166 -164300366 - MER4A LTR ERV1 0 664 261 578 141 10 20 chr5 38785166 38785265 -164300267 - MER4A LTR ERV1 -566 98 1 1820 102 16 12 chr5 38785304 38785558 -164299974 + L1PA10 LINE L1 5911 6165 -3 16362 107 55 21 chr5 38785575 38785752 -164299780 - MER4A-int LTR ERV1 -18 6580 6410 2109 120 0 20 chr5 38785752 38786074 -164299458 + AluSq SINE Alu 1 313 0 16362 107 55 21 chr5 38786074 38788550 -164296982 - MER4A-int LTR ERV1 -188 6410 3837 4483 121 81 24 chr5 38788549 38789441 -164296091 - MER4A-int LTR ERV1 -2917 3681 2739 * 1254 183 70 4 chr5 38789443 38789684 -164295848 + LTR8 LTR ERV1 1 257 -434 729 118 16 24 chr5 38789684 38789811 -164295721 - MER4A-int LTR ERV1 -4103 2495 2370 6396 84 52 0 chr5 38789811 38790664 -164294868 - MER11D LTR ERVK 0 897 1 39807 42 5 3 chr5 38790664 38792583 -164292949 - HERVK11D LTR ERVK 0 7752 5838 2422 76 7 0 chr5 38792583 38792886 -164292646 + AluY SINE Alu 1 305 -6 39807 42 5 3 chr5 38792886 38796501 -164289031 - HERVK11D LTR ERVK -1914 5838 1 6824 88 10 1 chr5 38796501 38797390 -164288142 - MER11D LTR ERVK 0 897 1 336 118 0 0 chr5 38797390 38797441 -164288091 - MER4A-int LTR ERV1 -3450 2136 2086 * 1237 144 35 0 chr5 38797435 38797637 -164287895 - MER4A-int LTR ERV1 -4024 991 783 11414 136 21 22 chr5 38797663 38800638 -164284894 + L1P3 LINE L1 10 2998 -3463 11147 97 15 15 chr5 38800738 38800900 -164284632 + L1P3 LINE L1 3518 3679 -2782 180 0 0 0 chr5 38800900 38800920 -164284612 + (CA)n Simple_repeat Simple_repeat 2 21 0 11147 97 15 15 chr5 38800920 38802405 -164283127 + L1P3 LINE L1 3679 5164 -1297 1200 199 91 62 chr5 38802380 38802732 -164282800 + L1MD3 LINE L1 7904 8265 -45 * 2203 87 21 3 chr5 38802756 38803042 -164282490 - AluSx SINE Alu -21 291 1 1715 166 19 80 chr5 38803634 38804049 -164281483 + LTR9 LTR ERV1 1 390 -222 569 202 83 63 chr5 38804018 38804302 -164281230 + LTR19C LTR ERV1 316 779 0 * 1614 138 25 28 chr5 38804588 38804871 -164280661 - LTR23 LTR ERV1 0 437 156 38 0 0 0 chr5 38805150 38805188 -164280344 + AT_rich Low_complexity Low_complexity 1 38 0 926 236 98 41 chr5 38805739 38806108 -164279424 + MLT1B LTR MaLR 1 390 0 1798 173 42 12 chr5 38806554 38806890 -164278642 + MSTB LTR MaLR 1 346 -80 445 233 26 66 chr5 38806924 38807106 -164278426 - LTR34 LTR ERV1 -246 453 187 * 1637 157 31 41 chr5 38807105 38807423 -164278109 - MER50 LTR ERV1 -22 712 398 1443 120 50 17 chr5 38807419 38807660 -164277872 - MER50 LTR ERV1 -485 249 1 * 1027 169 62 31 chr5 38807660 38807885 -164277647 + MLT1B LTR MaLR 159 390 0 2148 113 10 3 chr5 38808060 38808362 -164277170 + AluY SINE Alu 1 304 -7 326 278 146 7 chr5 38808557 38808701 -164276831 - MIR SINE MIR -6 256 93 5378 73 12 6 chr5 38809066 38809753 -164275779 + LTR8 LTR ERV1 1 691 0 835 226 103 148 chr5 38809839 38810557 -164274975 + LTR34 LTR ERV1 10 695 -4 3632 173 125 27 chr5 38810566 38811317 -164274215 + LTR1B LTR ERV1 2 826 0 1462 232 66 29 chr5 38811493 38811844 -164273688 - MLT1A2 LTR MaLR 0 396 1 239 291 55 55 chr5 38812613 38812723 -164272809 + MIR3 SINE MIR 45 154 -54 24 32 0 0 chr5 38812795 38812826 -164272706 + AT_rich Low_complexity Low_complexity 1 31 0 1601 118 175 48 chr5 38813275 38813709 -164271823 + MER1A DNA MER1_type 1 533 0 302 221 26 0 chr5 38813784 38813861 -164271671 - L2 LINE L2 -1 3312 3234 1937 129 7 39 chr5 38813897 38814229 -164271303 - AluSq SINE Alu 0 313 1 1969 150 30 122 chr5 38815303 38815763 -164269769 - MER47B DNA MER2_type 0 418 1 469 279 7 14 chr5 38816027 38816174 -164269358 - L3 LINE CR1 -251 1326 1181 455 311 192 17 chr5 38816518 38816878 -164268654 - L3 LINE CR1 -427 1150 728 516 281 41 63 chr5 38817018 38817527 -164268005 + L1ME4a LINE L1 5620 6117 -4 2420 95 0 7 chr5 38818459 38818765 -164266767 + AluSq SINE Alu 1 304 -9 227 198 73 83 chr5 38818779 38818875 -164266657 - L1ME4a LINE L1 -68 6053 5959 268 223 64 11 chr5 38819376 38819470 -164266062 + G-rich Low_complexity Low_complexity 4 102 0 264 77 0 0 chr5 38819783 38819822 -164265710 + (TG)n Simple_repeat Simple_repeat 2 40 0 1894 156 0 13 chr5 38820769 38820944 -164264588 - AluJo SINE Alu -6 306 135 1930 56 0 24 chr5 38820944 38821195 -164264337 - AluY SINE Alu -7 304 60 1894 156 0 13 chr5 38821195 38821327 -164264205 - AluJo SINE Alu -177 135 3 6078 57 26 1 chr5 38821525 38822293 -164263239 - L1PA7 LINE L1 -1 6153 5367 1846 228 6 0 chr5 38822348 38822707 -164262825 + MLT1A1 LTR MaLR 1 361 -4 29 28 0 0 chr5 38822707 38822743 -164262789 + AT_rich Low_complexity Low_complexity 1 36 0 621 221 43 43 chr5 38823210 38823373 -164262159 - MLT1H LTR MaLR 0 549 387 359 274 28 9 chr5 38823432 38823538 -164261994 + HAL1b LINE L1 395 502 -846 240 269 127 66 chr5 38823539 38823641 -164261891 + HAL1b LINE L1 536 630 -718 1793 190 65 14 chr5 38823641 38824009 -164261523 + MLT1B LTR MaLR 2 388 -2 240 269 127 66 chr5 38824009 38824103 -164261429 + HAL1b LINE L1 630 744 -604 1627 181 22 0 chr5 38824122 38824392 -164261140 + AluJb SINE Alu 1 276 -36 423 0 0 0 chr5 38824392 38824439 -164261093 + (TG)n Simple_repeat Simple_repeat 2 48 0 2355 110 0 0 chr5 38826444 38826745 -164258787 - AluSq SINE Alu -12 301 1 246 309 119 0 chr5 38826908 38826992 -164258540 - L2 LINE L2 -41 3231 3138 801 221 94 9 chr5 38827031 38827244 -164258288 - MIR SINE MIR -27 235 5 199 367 75 7 chr5 38827398 38827545 -164257987 - L2 LINE L2 -337 2977 2821 1840 144 87 31 chr5 38827686 38828041 -164257491 + THE1C LTR MaLR 1 375 0 194 0 39 0 chr5 38828592 38828618 -164256914 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2231 99 0 0 chr5 38828623 38828905 -164256627 - AluSp SINE Alu -31 282 1 2516 234 108 20 chr5 38829448 38830112 -164255420 + MER97a DNA MER1_type? 1 750 -144 2387 78 3 0 chr5 38830112 38830405 -164255127 - AluSp SINE Alu -19 294 1 2516 234 108 20 chr5 38830405 38830547 -164254985 + MER97a DNA MER1_type? 750 878 -16 581 307 57 57 chr5 38830562 38830914 -164254618 + LTR33 LTR ERVL 3 354 -167 489 286 31 21 chr5 38830920 38831112 -164254420 - LTR33 LTR ERVL -2 519 326 423 285 124 11 chr5 38831142 38831328 -164254204 - LTR33 LTR ERVL -312 209 3 1640 247 153 14 chr5 38831374 38831954 -164253578 + LTR50 LTR ERVL 2 662 -133 499 293 20 20 chr5 38831958 38832108 -164253424 + MLT1J2 LTR MaLR 277 426 -24 663 65 0 0 chr5 38833284 38833377 -164252155 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 626 212 18 0 chr5 38833378 38833491 -164252041 - FLAM_C SINE Alu -27 116 2 2354 186 72 67 chr5 38834022 38834354 -164251178 + MLT1E2 LTR MaLR 1 339 -287 563 241 9 0 chr5 38834354 38834470 -164251062 + FLAM_A SINE Alu 1 117 -16 2354 186 72 67 chr5 38834470 38834760 -164250772 + MLT1E2 LTR MaLR 339 626 0 238 271 35 0 chr5 38835237 38835322 -164250210 + MER113 DNA MER1_type? 4 91 -430 2109 139 0 16 chr5 38835345 38835661 -164249871 - AluSx SINE Alu -1 311 1 183 372 36 44 chr5 38835957 38836094 -164249438 - L2 LINE L2 0 3272 3137 1127 205 37 118 chr5 38836231 38836380 -164249152 + MLT1G LTR MaLR 11 170 -360 2649 220 29 0 chr5 38836380 38836931 -164248601 - MLT1F1 LTR MaLR 0 567 1 1127 205 37 118 chr5 38836931 38837173 -164248359 + MLT1G LTR MaLR 170 300 -230 1897 177 28 17 chr5 38837173 38837534 -164247998 + MLT1A1 LTR MaLR 1 365 0 1127 205 37 118 chr5 38837534 38837632 -164247900 + MLT1G LTR MaLR 300 404 -126 390 332 58 10 chr5 38837690 38837898 -164247634 + MIR SINE MIR 1 218 -44 584 274 97 49 chr5 38838304 38838656 -164246876 + MLT1J LTR MaLR 132 450 0 641 316 9 0 chr5 38839190 38839415 -164246117 - MIR SINE MIR -16 246 20 613 211 58 18 chr5 38839532 38839703 -164245829 - L1ME3A LINE L1 -22 6148 5971 773 243 102 49 chr5 38840653 38841080 -164244452 + LTR33 LTR ERVL 15 521 0 992 67 0 0 chr5 38841430 38841550 -164243982 - AluSg/x SINE Alu -13 299 180 1787 142 34 7 chr5 38893866 38894161 -164191371 - AluJb SINE Alu -9 303 1 495 232 56 50 chr5 38894398 38894596 -164190936 + L1ME4a LINE L1 5921 6119 -2 662 195 36 67 chr5 38895134 38895329 -164190203 - MER53 DNA DNA 0 189 1 414 0 0 0 chr5 38895359 38895405 -164190127 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1931 175 30 9 chr5 38895454 38895791 -164189741 + MER2 DNA MER2_type 1 344 0 342 305 29 0 chr5 38896496 38896601 -164188931 + MIR3 SINE MIR 78 185 -23 1730 155 0 0 chr5 38896866 38897117 -164188415 + AluSq SINE Alu 1 251 -62 253 268 12 37 chr5 38897276 38897358 -164188174 - L2 LINE L2 0 3313 3234 2192 170 61 42 chr5 38897534 38897992 -164187540 + MLT1C LTR MaLR 1 467 0 1713 142 61 24 chr5 38897993 38898289 -164187243 + AluJb SINE Alu 1 307 -5 282 290 70 23 chr5 38898960 38899092 -164186440 - MIR SINE MIR -58 150 6 376 235 60 100 chr5 38899272 38899345 -164186187 - MIR SINE MIR -51 211 137 1970 149 17 3 chr5 38899345 38899646 -164185886 - AluJb SINE Alu -6 306 2 376 235 60 100 chr5 38899646 38899772 -164185760 - MIR SINE MIR -125 137 20 403 296 114 11 chr5 38899800 38899976 -164185556 - MER117 DNA MER1_type 0 197 4 1426 96 0 0 chr5 38900058 38900255 -164185277 + L1PA14 LINE L1 5960 6156 -5 2105 146 0 0 chr5 38900486 38900788 -164184744 + AluSx SINE Alu 1 302 -10 331 248 179 14 chr5 38900798 38900943 -164184589 - MIR SINE MIR 0 262 94 630 244 61 83 chr5 38901149 38901379 -164184153 + MER115 DNA AcHobo 302 526 -167 529 241 71 50 chr5 38901478 38901619 -164183913 + MER117 DNA MER1_type 54 197 0 * 715 253 6 0 chr5 38901619 38901785 -164183747 + MER115 DNA AcHobo 526 692 -1 347 298 33 13 chr5 38902104 38902255 -164183277 + LTR67 LTR ERVL 387 540 -17 1545 199 80 17 chr5 38902415 38902767 -164182765 + MLT1A2 LTR MaLR 1 374 0 399 175 116 84 chr5 38905025 38905232 -164180300 - MER34 LTR ERV1 -5 739 347 202 259 49 25 chr5 38905658 38905739 -164179793 + L2 LINE L2 3227 3309 -4 340 298 85 64 chr5 38905801 38906130 -164179402 + L2 LINE L2 2210 2545 -769 2684 192 59 9 chr5 38906131 38906689 -164178843 + L1MB2 LINE L1 5577 6162 -9 2724 187 72 19 chr5 38906935 38907521 -164178011 - LTR27 LTR ERV1 -16 620 1 30 0 0 0 chr5 38907667 38907697 -164177835 + AT_rich Low_complexity Low_complexity 1 30 0 217 153 17 34 chr5 38908066 38908125 -164177407 + T-rich Low_complexity Low_complexity 2 59 0 2032 131 50 39 chr5 38908786 38909146 -164176386 + THE1B LTR MaLR 1 364 0 189 171 0 0 chr5 38909407 38909442 -164176090 + GA-rich Low_complexity Low_complexity 2 36 0 605 263 77 29 chr5 38910044 38910253 -164175279 + MIR SINE MIR 40 258 -4 2725 179 69 49 chr5 38910750 38911427 -164174105 - LTR8 LTR ERV1 0 691 1 649 236 11 73 chr5 38911729 38911920 -164173612 + MER97a DNA MER1_type? 1 179 -715 2814 96 0 16 chr5 38911984 38912360 -164173172 - LTR8 LTR ERV1 0 691 322 1815 161 167 65 chr5 38912574 38912719 -164172813 - LTR49 LTR ERV1 0 595 466 1725 180 10 7 chr5 38912719 38913019 -164172513 + AluJb SINE Alu 1 301 -11 1815 161 167 65 chr5 38913019 38913413 -164172119 - LTR49 LTR ERV1 -129 466 1 475 99 0 14 chr5 38913484 38913555 -164171977 + LTR26B LTR ERV1 1 70 -461 3807 115 21 23 chr5 38913555 38914121 -164171411 + MER61E LTR ERV1 1 565 -4 3893 160 64 10 chr5 38914139 38914814 -164170718 - MER50 LTR ERV1 -23 711 1 2910 162 0 11 chr5 38914814 38915276 -164170256 + LTR26B LTR ERV1 75 531 0 1601 175 39 44 chr5 38915276 38915613 -164169919 + MLT1C LTR MaLR 29 363 -104 2983 166 101 37 chr5 38915616 38916268 -164169264 + LTR8A LTR ERV1 34 727 0 652 157 9 17 chr5 38916269 38916384 -164169148 + MLT1C LTR MaLR 352 465 -2 2089 174 32 108 chr5 38916436 38916907 -164168625 - MER61E LTR ERV1 -43 526 92 430 213 56 86 chr5 38916894 38917130 -164168402 - MER61E LTR ERV1 -455 324 1 * 854 214 113 39 chr5 38917130 38917544 -164167988 - LTR56 LTR ERV1 -20 556 9 1396 193 52 137 chr5 38918173 38918588 -164166944 - MER34C LTR ERV1 -3 582 133 2252 108 7 0 chr5 38918588 38918895 -164166637 - AluSq SINE Alu -2 311 3 1396 193 52 137 chr5 38918895 38918964 -164166568 - MER34C LTR ERV1 -452 133 155 1955 134 31 0 chr5 38918964 38919255 -164166277 + AluSq SINE Alu 7 306 -7 1396 193 52 137 chr5 38919255 38919366 -164166166 - MER34C LTR ERV1 -429 156 37 601 246 90 37 chr5 38919672 38919916 -164165616 + MIR SINE MIR 6 262 0 890 269 8 16 chr5 38919934 38920179 -164165353 + MIR SINE MIR 20 262 0 2113 104 0 14 chr5 38920331 38920652 -164164880 - AluSx SINE Alu 0 317 1 23 0 0 0 chr5 38921498 38921521 -164164011 + AT_rich Low_complexity Low_complexity 1 23 0 240 206 78 128 chr5 38922150 38922291 -164163241 + LTR67 LTR ERVL 2 135 -422 596 286 30 5 chr5 38922429 38922628 -164162904 + LTR67 LTR ERVL 354 557 0 1030 154 0 0 chr5 38922983 38923139 -164162393 - MLT2B1 LTR ERVL 0 520 365 681 149 0 10 chr5 38923142 38923397 -164162135 + AluJ SINE Alu 11 311 -1 286 157 20 0 chr5 38923411 38923462 -164162070 - MLT1A1 LTR MaLR -313 52 1 4165 182 103 10 chr5 38923477 38924361 -164161171 - Charlie1a DNA MER1_type -489 966 1 1897 144 33 16 chr5 38924542 38924847 -164160685 - AluSx SINE Alu -2 310 1 452 290 145 5 chr5 38924870 38925070 -164160462 - MIR SINE MIR -4 258 31 476 292 25 6 chr5 38925558 38925719 -164159813 + MIR SINE MIR 28 191 -71 459 195 76 34 chr5 38925974 38926092 -164159440 - MER103 DNA DNA -1 165 43 1677 157 105 0 chr5 38926145 38926450 -164159082 + MER44D DNA MER2_type 1 607 -2 261 343 35 21 chr5 38926777 38926920 -164158612 - MIR3 SINE MIR -27 181 37 224 196 39 0 chr5 38927489 38927540 -164157992 + GA-rich Low_complexity Low_complexity 4 56 0 200 153 51 17 chr5 38927692 38927751 -164157781 + T-rich Low_complexity Low_complexity 5 65 0 2047 157 27 29 chr5 38928525 38928743 -164156789 - MLT1B LTR MaLR 0 390 172 1960 120 4 0 chr5 38928743 38929019 -164156513 - AluSx SINE Alu -2 310 34 2047 157 27 29 chr5 38929019 38929176 -164156356 - MLT1B LTR MaLR -218 172 16 221 355 53 33 chr5 38929245 38929397 -164156135 + MIR3 SINE MIR 17 171 -37 6700 60 5 0 chr5 38929657 38930649 -164154883 - HERVL LTR ERVL -360 5294 4257 1411 78 16 3 chr5 38930649 38930844 -164154688 - MLT2A1 LTR ERVL -201 213 1 239 284 34 0 chr5 38932221 38932309 -164153223 + MLT1C LTR MaLR 1 91 -376 * 524 191 0 9 chr5 38932306 38932411 -164153121 + MLT1C LTR MaLR 364 467 0 247 261 141 11 chr5 38932879 38932971 -164152561 + MIR SINE MIR 79 182 -80 1248 299 28 14 chr5 38934003 38934428 -164151104 + LTR16A LTR ERVL 16 446 -4 288 243 23 10 chr5 38934886 38934985 -164150547 + MIR SINE MIR 54 152 -66 800 288 107 30 chr5 38935062 38935455 -164150077 - L3 LINE CR1 -100 1477 1055 472 313 88 51 chr5 38935760 38936134 -164149398 - MLT1L LTR MaLR -227 388 1 2141 104 31 0 chr5 38936263 38936551 -164148981 + AluSx SINE Alu 1 297 -15 248 53 26 0 chr5 38936553 38936591 -164148941 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 894 186 0 0 chr5 38936594 38936734 -164148798 - AluJb SINE Alu -26 286 147 315 304 138 6 chr5 38936870 38937051 -164148481 - L3 LINE CR1 -355 1222 1018 21 82 0 0 chr5 38937068 38937117 -164148415 + AT_rich Low_complexity Low_complexity 1 49 0 205 195 49 122 chr5 38937365 38937421 -164148111 - L3 LINE CR1 -547 1030 980 2270 125 3 0 chr5 38937421 38937725 -164147807 - AluSq SINE Alu -8 305 1 205 195 49 122 chr5 38937725 38937750 -164147782 - L3 LINE CR1 -597 980 955 279 311 15 30 chr5 38937818 38937950 -164147582 - L3 LINE CR1 -673 904 775 214 255 0 0 chr5 38938183 38938230 -164147302 + (CA)n Simple_repeat Simple_repeat 1 47 0 453 127 0 0 chr5 38938245 38938316 -164147216 - MER41E LTR ERV1 -120 392 322 1373 212 21 65 chr5 38938513 38938895 -164146637 - MLT1A1 LTR MaLR 0 365 1 1768 183 3 13 chr5 38938948 38939260 -164146272 - AluJb SINE Alu -2 310 2 1965 184 91 16 chr5 38940293 38940722 -164144810 - MLT1C LTR MaLR 0 467 7 2182 127 0 13 chr5 38940833 38941149 -164144383 + AluSx SINE Alu 1 312 0 641 292 64 0 chr5 38941168 38941404 -164144128 + MIR SINE MIR 2 252 -10 2051 171 28 15 chr5 38941752 38942143 -164143389 + MSTD LTR MaLR 1 396 0 286 294 103 27 chr5 38942156 38942302 -164143230 - MIR SINE MIR -65 197 41 2397 92 16 0 chr5 38942491 38942796 -164142736 + AluSx SINE Alu 1 310 -2 1852 164 11 0 chr5 38943086 38943373 -164142159 + AluSx SINE Alu 1 290 -22 247 278 63 48 chr5 38943540 38943666 -164141866 + MIR SINE MIR 100 227 -35 1992 206 25 21 chr5 38944555 38945032 -164140500 + Charlie4a DNA MER1_type 27 505 -3 1620 182 0 21 chr5 38945219 38945505 -164140027 + AluSq SINE Alu 16 295 -18 514 259 24 29 chr5 38946006 38946176 -164139356 + MER45A DNA AcHobo 10 178 0 1204 212 94 26 chr5 38946273 38946671 -164138861 + MLT2B1 LTR ERVL 2 457 -63 2162 112 3 3 chr5 38946683 38946978 -164138554 - AluSx SINE Alu -11 301 7 1573 231 138 18 chr5 38947157 38947608 -164137924 - MLT1D LTR MaLR 0 505 1 227 273 36 0 chr5 38947800 38947855 -164137677 + G-rich Low_complexity Low_complexity 6 62 0 1512 188 0 31 chr5 38948575 38948862 -164136670 - AluJb SINE Alu -20 292 15 2324 101 3 0 chr5 38948886 38949182 -164136350 - AluSx SINE Alu -15 297 1 484 274 132 38 chr5 38949638 38949978 -164135554 + L2 LINE L2 2468 2839 -475 360 264 20 74 chr5 38950047 38950195 -164135337 - MIR SINE MIR -23 239 100 336 238 42 35 chr5 38950382 38950525 -164135007 + L1ME4a LINE L1 5960 6103 -18 576 284 108 22 chr5 38950525 38950793 -164134739 + L2 LINE L2 3023 3313 0 874 167 0 14 chr5 38951538 38951682 -164133850 + AluJb SINE Alu 150 291 -21 419 287 56 7 chr5 38952248 38952391 -164133141 + MIR SINE MIR 3 152 -110 622 315 121 30 chr5 38952396 38952652 -164132880 + LTR33 LTR ERVL 89 395 -126 2072 152 118 0 chr5 38952652 38953033 -164132499 - MSTC LTR MaLR -2 426 1 622 315 121 30 chr5 38953033 38953173 -164132359 + LTR33 LTR ERVL 395 521 0 744 208 45 0 chr5 38953367 38953521 -164132011 + LTR33A LTR ERVL 363 523 0 243 276 0 13 chr5 38953522 38953598 -164131934 + MIR SINE MIR 110 184 -78 2258 106 0 23 chr5 38953729 38954030 -164131502 + AluSx SINE Alu 5 298 -14 865 199 4 3 chr5 38955286 38955522 -164130010 + AluJb SINE Alu 1 305 -7 1411 165 95 22 chr5 38956937 38957098 -164128434 - AluJo SINE Alu -13 299 108 243 0 0 0 chr5 38957098 38957125 -164128407 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1411 165 95 22 chr5 38957125 38957236 -164128296 - AluJo SINE Alu -204 108 7 469 268 155 10 chr5 38957560 38957754 -164127778 + MIR SINE MIR 28 249 -13 289 178 69 59 chr5 38958266 38958367 -164127165 - MIR SINE MIR -21 241 140 1110 316 131 9 chr5 38958371 38958823 -164126709 + LTR33 LTR ERVL 15 521 0 316 205 197 60 chr5 38958823 38958940 -164126592 - MIR SINE MIR -109 153 21 1797 162 3 29 chr5 38959298 38959607 -164125925 - AluJo SINE Alu -7 305 5 233 333 15 0 chr5 38960093 38960159 -164125373 + MIR SINE MIR 8 74 -188 1071 284 62 5 chr5 38960160 38960547 -164124985 - LTR16C LTR ERVL -2 489 81 636 315 60 4 chr5 38961203 38961454 -164124078 - ERVL LTR ERVL -858 4906 4642 1554 216 14 3 chr5 38961867 38962163 -164123369 + AluJo SINE Alu 1 299 -13 237 365 58 0 chr5 38962177 38962281 -164123251 + MIR SINE MIR 34 143 -65 2791 156 61 20 chr5 38962465 38962778 -164122754 - MLT2B2 LTR ERVL 0 515 173 2293 151 92 0 chr5 38962778 38963170 -164122362 + MSTC LTR MaLR 1 428 0 2791 156 61 20 chr5 38963170 38963351 -164122181 - MLT2B2 LTR ERVL -342 173 1 256 310 123 39 chr5 38964039 38964194 -164121338 + MIR3 SINE MIR 28 195 -13 604 294 83 24 chr5 38964222 38964511 -164121021 + L2 LINE L2 3005 3310 -3 2300 84 7 0 chr5 38964547 38964831 -164120701 + AluSg SINE Alu 1 286 -24 2190 136 0 3 chr5 38965083 38965392 -164120140 + AluSx SINE Alu 1 308 -4 504 279 0 0 chr5 38965520 38965656 -164119876 + MIR SINE MIR 18 153 -109 843 284 111 31 chr5 38965687 38966110 -164119422 + LTR33 LTR ERVL 47 503 -18 272 279 0 0 chr5 38966147 38966226 -164119306 + MIR SINE MIR 183 261 -1 562 246 8 15 chr5 38966554 38966684 -164118848 + MER45A DNA AcHobo 47 175 -3 264 30 0 0 chr5 38967675 38967708 -164117824 + (CA)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr5 38968555 38968578 -164116954 + AT_rich Low_complexity Low_complexity 1 23 0 2298 99 0 0 chr5 38969051 38969333 -164116199 - AluSc SINE Alu -27 282 1 2002 135 3 13 chr5 38969707 38970011 -164115521 + AluSx SINE Alu 1 301 -11 829 204 0 0 chr5 38970295 38970442 -164115090 + FAM SINE Alu 12 158 -27 1538 98 22 40 chr5 38970444 38970668 -164114864 + MER30 DNA MER1_type 11 230 0 898 153 0 0 chr5 38970695 38970826 -164114706 + FLAM_C SINE Alu 6 136 -7 1971 150 3 19 chr5 38971517 38971831 -164113701 + AluSq SINE Alu 1 309 -4 22 56 0 0 chr5 38971959 38971995 -164113537 + AT_rich Low_complexity Low_complexity 1 36 0 1131 241 74 83 chr5 38972597 38972688 -164112844 - MLT1L LTR MaLR -31 584 494 1869 183 29 18 chr5 38972688 38973071 -164112461 - MLT1B LTR MaLR -3 387 1 1131 241 74 83 chr5 38973071 38973532 -164112000 - MLT1L LTR MaLR -121 494 37 2153 130 17 0 chr5 38974211 38974512 -164111020 - AluJb SINE Alu -6 306 1 191 214 143 14 chr5 38974950 38975020 -164110512 + L3 LINE CR1 1148 1226 -351 688 80 0 0 chr5 38975274 38975362 -164110170 + AluSg/x SINE Alu 213 300 -10 2611 64 0 3 chr5 38975398 38975710 -164109822 - AluY SINE Alu 0 311 1 180 344 0 0 chr5 38975823 38975884 -164109648 - L3 LINE CR1 -34 1543 1483 2028 161 18 21 chr5 38975935 38976271 -164109261 - MER2 DNA MER2_type -10 335 1 419 368 35 56 chr5 38976299 38976674 -164108858 - L2 LINE L2 0 3272 2906 1641 186 13 10 chr5 38976684 38976985 -164108547 - AluJb SINE Alu -7 305 4 1893 149 30 10 chr5 38978297 38978599 -164106933 + AluJb SINE Alu 1 308 -4 2223 148 77 17 chr5 38978772 38979176 -164106356 + MSTA LTR MaLR 1 428 0 351 60 0 0 chr5 38980601 38980651 -164104881 + (A)n Simple_repeat Simple_repeat 1 50 0 496 311 91 20 chr5 38981010 38981351 -164104181 + L1ME4a LINE L1 5524 5888 -233 4040 107 140 56 chr5 38981415 38981697 -164103835 + Tigger3(Golem) DNA MER2_type 2 259 -2770 2520 63 0 3 chr5 38981697 38982000 -164103532 - AluY SINE Alu -9 302 1 4040 107 140 56 chr5 38982000 38982039 -164103493 + Tigger3(Golem) DNA MER2_type 259 293 -2736 2148 124 7 0 chr5 38982039 38982337 -164103195 - AluSq SINE Alu -13 300 1 4040 107 140 56 chr5 38982337 38982706 -164102826 + Tigger3(Golem) DNA MER2_type 293 630 -2399 2192 118 10 0 chr5 38982706 38983012 -164102520 - AluSx SINE Alu -3 309 1 4040 107 140 56 chr5 38983012 38983106 -164102426 + Tigger3(Golem) DNA MER2_type 630 715 -2314 281 89 22 0 chr5 38983106 38983151 -164102381 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 4040 107 140 56 chr5 38983151 38983234 -164102298 + Tigger3(Golem) DNA MER2_type 715 790 -2239 1800 184 0 13 chr5 38983234 38983550 -164101982 - AluJo SINE Alu 0 312 1 4040 107 140 56 chr5 38983550 38983822 -164101710 + Tigger3(Golem) DNA MER2_type 790 3028 -1 298 273 0 0 chr5 38983853 38983919 -164101613 + L1ME4a LINE L1 5987 6052 -69 789 214 23 6 chr5 38984384 38984557 -164100975 - MER45A DNA AcHobo -2 176 1 261 139 0 0 chr5 38984773 38984816 -164100716 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 261 0 0 0 chr5 38985033 38985062 -164100470 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1245 158 206 0 chr5 38985065 38985293 -164100239 - AluJo SINE Alu -35 277 3 464 110 12 0 chr5 38985332 38985414 -164100118 + L1MA4A LINE L1 6220 6302 -1 272 336 82 0 chr5 38985577 38985687 -164099845 + MIR SINE MIR 82 200 -62 2079 127 10 0 chr5 38986373 38986664 -164098868 + AluSx SINE Alu 1 294 -18 562 81 0 0 chr5 38986672 38986746 -164098786 + Alu SINE Alu 2 75 -236 270 0 0 0 chr5 38986997 38987027 -164098505 + (TG)n Simple_repeat Simple_repeat 2 31 0 421 281 97 71 chr5 38987696 38987784 -164097748 - L2 LINE L2 -1 3312 3228 2024 125 28 0 chr5 38987784 38988073 -164097459 + AluSx SINE Alu 3 299 -13 2205 107 7 0 chr5 38988075 38988365 -164097167 + AluSg SINE Alu 1 292 -18 421 281 97 71 chr5 38988365 38988964 -164096568 - L2 LINE L2 -85 3228 2601 829 169 0 0 chr5 38989589 38989719 -164095813 - FLAM_C SINE Alu -3 130 1 2102 137 0 0 chr5 38989723 38990046 -164095486 - AluSx SINE Alu 0 323 1 352 338 33 26 chr5 38990112 38990263 -164095269 + MIR SINE MIR 1 152 -110 845 163 7 13 chr5 38991867 38992020 -164093512 + MLT1A2 LTR MaLR 1 152 -213 1745 146 14 41 chr5 38992024 38992159 -164093373 + AluJb SINE Alu 1 138 -174 2338 107 0 0 chr5 38992159 38992458 -164093074 + AluSc SINE Alu 1 299 -10 1745 146 14 41 chr5 38992458 38992617 -164092915 + AluJb SINE Alu 138 287 -25 36 19 0 19 chr5 38992640 38992678 -164092854 + AT_rich Low_complexity Low_complexity 1 39 -14 2394 91 3 0 chr5 38992678 38992986 -164092546 - AluSc SINE Alu 0 309 1 36 19 0 19 chr5 38992986 38993001 -164092531 + AT_rich Low_complexity Low_complexity 39 53 0 962 228 5 24 chr5 38993001 38993212 -164092320 + MLT1A2 LTR MaLR 157 363 -11 259 235 0 29 chr5 38993407 38993475 -164092057 - L2 LINE L2 -2 3270 3205 2183 232 114 21 chr5 38993684 38994343 -164091189 + HsTC2c DNA Tc2 1 720 -9 667 224 94 50 chr5 38994403 38994604 -164090928 - MER63A DNA MER1_type 0 210 1 4144 126 14 22 chr5 38994834 38995502 -164090030 + Tigger3b DNA MER2_type 1 662 -569 340 39 77 0 chr5 38995542 38995594 -164089938 + Tigger3b DNA MER2_type 650 705 -527 2143 102 6 35 chr5 38995613 38995928 -164089604 - AluSx SINE Alu -6 306 1 183 320 67 62 chr5 38995957 38996135 -164089397 - L2 LINE L2 -371 2943 2765 319 220 0 90 chr5 38996312 38996412 -164089120 + MIR SINE MIR 92 182 -80 267 256 13 0 chr5 38996480 38996558 -164088974 + MIR3 SINE MIR 129 207 -1 560 293 5 25 chr5 38997140 38997338 -164088194 - MIR SINE MIR -20 242 49 22 35 0 0 chr5 38998257 38998286 -164087246 + AT_rich Low_complexity Low_complexity 1 29 0 1456 206 33 7 chr5 38998286 38998562 -164086970 - AluJo SINE Alu -23 289 7 304 248 183 0 chr5 38999065 38999202 -164086330 + L2 LINE L2 3011 3172 -141 1692 175 32 66 chr5 38999249 38999297 -164086235 + MLT1A1 LTR MaLR 1 49 -316 2257 130 31 0 chr5 38999297 38999650 -164085882 + THE1B LTR MaLR 1 364 0 1692 175 32 66 chr5 38999650 38999979 -164085553 + MLT1A1 LTR MaLR 49 365 0 240 281 22 0 chr5 38999982 39000071 -164085461 + L2 LINE L2 3182 3272 0 788 219 24 6 chr5 39000200 39000369 -164085163 + MER58B DNA MER1_type 167 338 -3 2227 129 0 0 chr5 39000517 39000819 -164084713 - AluSx SINE Alu -9 303 2 26 50 0 0 chr5 39000826 39000866 -164084666 + AT_rich Low_complexity Low_complexity 1 40 0 962 278 53 32 chr5 39000900 39001238 -164084294 - MLT1I LTR MaLR -2 407 63 2027 167 10 52 chr5 39002225 39002632 -164082900 - MLT1B LTR MaLR 0 390 1 1791 157 33 0 chr5 39002664 39002966 -164082566 + AluJb SINE Alu 1 311 0 288 0 0 0 chr5 39003071 39003103 -164082429 + (TG)n Simple_repeat Simple_repeat 1 32 0 2377 103 3 0 chr5 39003136 39003448 -164082084 + AluSp SINE Alu 1 313 0 362 315 56 20 chr5 39003711 39004054 -164081478 - L1MEc LINE L1 -4738 1572 1189 2885 49 11 0 chr5 39004054 39004403 -164081129 - L1PA7 LINE L1 -8 6146 5794 362 315 56 20 chr5 39004403 39004603 -164080929 - L1MEc LINE L1 -5121 1189 998 1162 210 102 42 chr5 39004603 39004936 -164080596 - MSTD LTR MaLR 0 396 44 239 162 0 149 chr5 39004976 39005124 -164080408 - AluSp/q SINE Alu -13 290 165 882 267 43 89 chr5 39005263 39005635 -164079897 - L1MEc LINE L1 -5187 932 597 1706 154 0 39 chr5 39005635 39005920 -164079612 - AluJb SINE Alu -21 291 18 882 267 43 89 chr5 39005920 39006154 -164079378 - L1MEc LINE L1 -5522 597 354 266 351 14 7 chr5 39006269 39006417 -164079115 - L1MEc LINE L1 -5966 153 5 2016 155 62 6 chr5 39006583 39006746 -164078786 - THE1C LTR MaLR 0 375 223 231 36 0 0 chr5 39006746 39006774 -164078758 + (GA)n Simple_repeat Simple_repeat 1 28 0 2016 155 62 6 chr5 39006774 39006965 -164078567 - THE1C LTR MaLR -152 223 1 1687 142 0 31 chr5 39007014 39007303 -164078229 + AluSq SINE Alu 6 285 -28 324 0 0 0 chr5 39007303 39007339 -164078193 + (CA)n Simple_repeat Simple_repeat 2 37 0 480 245 192 37 chr5 39008747 39009102 -164076430 + MLT1G1 LTR MaLR 24 472 -123 191 129 0 0 chr5 39009321 39009352 -164076180 + MER5B DNA MER1_type 3 33 -145 39263 83 8 8 chr5 39009447 39015594 -164069938 - L1PA6 LINE L1 0 6154 11 2204 119 0 0 chr5 39015690 39015984 -164069548 + AluSx SINE Alu 1 294 -18 788 246 20 10 chr5 39016335 39016534 -164068998 - MIR SINE MIR -13 249 49 768 185 83 74 chr5 39016621 39016837 -164068695 + AluJo SINE Alu 1 218 -94 246 174 0 0 chr5 39016840 39016886 -164068646 + AluJb SINE Alu 86 131 -2 23 68 0 0 chr5 39016901 39016945 -164068587 + AT_rich Low_complexity Low_complexity 1 44 0 2246 109 7 0 chr5 39018096 39018390 -164067142 + AluSx SINE Alu 1 296 -16 1836 183 20 0 chr5 39018491 39018797 -164066735 + AluJb SINE Alu 1 312 0 992 141 58 0 chr5 39018939 39019095 -164066437 + AluJb SINE Alu 136 300 -12 2186 123 0 16 chr5 39019095 39019403 -164066129 + AluSg SINE Alu 1 303 -7 435 222 40 24 chr5 39019810 39019936 -164065596 + MER5B DNA MER1_type 51 178 0 370 290 90 0 chr5 39020388 39020533 -164064999 + MIR SINE MIR 30 187 -75 810 265 39 35 chr5 39020585 39020774 -164064758 + MIR SINE MIR 3 195 -67 431 264 0 69 chr5 39020774 39020918 -164064614 - MER94 DNA DNA 0 134 1 810 265 39 35 chr5 39020918 39020985 -164064547 + MIR SINE MIR 195 260 -2 1155 194 94 10 chr5 39021001 39021300 -164064232 - MER33 DNA MER1_type 0 324 1 1556 125 7 88 chr5 39022288 39022583 -164062949 + AluJb SINE Alu 4 274 -38 437 125 0 25 chr5 39022612 39022692 -164062840 + (GGAA)n Simple_repeat Simple_repeat 4 81 0 254 284 71 41 chr5 39022705 39022874 -164062658 - MIR3 SINE MIR -32 176 2 25 0 0 0 chr5 39025022 39025047 -164060485 + GC_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 39025549 39025588 -164059944 + GC_rich Low_complexity Low_complexity 1 39 0 212 191 0 24 chr5 39027224 39027266 -164058266 + CT-rich Low_complexity Low_complexity 3 43 0 2218 84 3 25 chr5 39027291 39027601 -164057931 + AluSc SINE Alu 1 304 0 1609 183 47 0 chr5 39028055 39028334 -164057198 - AluJb SINE Alu -20 292 1 198 103 0 0 chr5 39028374 39028403 -164057129 + (TTTTTA)n Simple_repeat Simple_repeat 4 32 0 1891 136 8 0 chr5 39028692 39028956 -164056576 + AluJb SINE Alu 18 283 -29 2154 82 4 14 chr5 39028958 39029239 -164056293 + AluSp SINE Alu 29 306 -7 280 307 47 8 chr5 39029314 39029441 -164056091 + MIR3 SINE MIR 66 197 -11 227 132 38 57 chr5 39029585 39029638 -164055894 - U13 snRNA snRNA -52 52 1 667 262 226 21 chr5 39029638 39029831 -164055701 + L2 LINE L2 2909 3061 -252 1071 179 57 35 chr5 39029831 39030060 -164055472 - MER46A DNA MER2_type -1 235 2 667 262 226 21 chr5 39030060 39030202 -164055330 + L2 LINE L2 3061 3313 0 1241 190 0 14 chr5 39030647 39030868 -164054664 - AluJo SINE Alu -94 218 1 2255 111 0 22 chr5 39031501 39031817 -164053715 - AluSx SINE Alu -1 311 3 1843 175 3 7 chr5 39032017 39032326 -164053206 + AluJb SINE Alu 1 308 -4 692 161 22 36 chr5 39033009 39033146 -164052386 + AluJb SINE Alu 2 136 -176 583 101 22 0 chr5 39033154 39033243 -164052289 + AluY SINE Alu 219 309 -2 21 0 0 0 chr5 39033407 39033428 -164052104 + AT_rich Low_complexity Low_complexity 1 21 0 2840 116 9 5 chr5 39033428 39033784 -164051748 - L1PB1 LINE L1 -1 6150 5786 1011 148 0 0 chr5 39033784 39033997 -164051535 + (TA)n Simple_repeat Simple_repeat 1 213 0 2840 116 9 5 chr5 39033997 39034066 -164051466 - L1PB1 LINE L1 -365 5786 5719 204 40 0 0 chr5 39034281 39034306 -164051226 + (T)n Simple_repeat Simple_repeat 1 25 0 216 313 102 8 chr5 39035807 39035935 -164049597 - MIR SINE MIR -122 140 1 1830 166 7 3 chr5 39036037 39036333 -164049199 - AluJb SINE Alu -15 297 1 24 0 0 0 chr5 39036339 39036363 -164049169 + AT_rich Low_complexity Low_complexity 1 24 0 2188 107 0 3 chr5 39036915 39037204 -164048328 + AluSx SINE Alu 11 298 -14 2307 105 0 0 chr5 39037655 39037950 -164047582 - AluSc SINE Alu -14 295 1 325 316 63 19 chr5 39039080 39039238 -164046294 + MIR SINE MIR 28 192 -70 34 0 0 0 chr5 39039247 39039281 -164046251 + AT_rich Low_complexity Low_complexity 1 34 0 1015 156 113 59 chr5 39040357 39040667 -164044865 - MER33 DNA MER1_type -5 319 1 319 169 46 0 chr5 39042327 39042392 -164043140 + MLT1K LTR MaLR 520 587 -1 2144 125 0 13 chr5 39043377 39043682 -164041850 - AluSx SINE Alu -9 303 3 2254 100 0 7 chr5 39043693 39043992 -164041540 - AluSc SINE Alu -12 297 1 2286 227 61 30 chr5 39044000 39044266 -164041266 - L1MB7 LINE L1 0 6184 5928 2089 126 7 7 chr5 39044266 39044568 -164040964 + AluJo SINE Alu 1 302 -10 2286 227 61 30 chr5 39044568 39044943 -164040589 - L1MB7 LINE L1 -256 5928 5523 1931 139 41 0 chr5 39045951 39046246 -164039286 - AluSg SINE Alu -3 307 1 1868 132 38 11 chr5 39046247 39046534 -164038998 - AluJo SINE Alu -17 295 1 447 70 70 0 chr5 39046629 39046700 -164038832 + MADE1 DNA Mariner 5 80 0 999 154 0 0 chr5 39046886 39047059 -164038473 - AluSg/x SINE Alu 0 306 134 2030 156 93 3 chr5 39047156 39047509 -164038023 + MLT1B LTR MaLR 1 385 -5 197 33 33 0 chr5 39048114 39048144 -164037388 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 1556 232 79 3 chr5 39049015 39049382 -164036150 - MSTD LTR MaLR 0 396 2 188 307 57 11 chr5 39049475 39049563 -164035969 + L2 LINE L2 2962 3053 -219 1310 153 14 32 chr5 39050301 39050517 -164035015 - AluJo SINE Alu -22 290 79 418 254 133 32 chr5 39051033 39051300 -164034232 + MLT1G1 LTR MaLR 24 344 -230 6565 70 15 0 chr5 39051790 39052645 -164032887 - L1PA6 LINE L1 0 6154 5287 7834 122 6 3 chr5 39052765 39053902 -164031630 - HERVK9 LTR ERVK -282 5634 4494 237 322 11 0 chr5 39054097 39054184 -164031348 + L3 LINE CR1 928 1015 -562 2500 90 3 0 chr5 39054638 39054950 -164030582 - AluSp SINE Alu 0 313 1 1668 199 0 3 chr5 39054950 39055257 -164030275 - AluSx SINE Alu -6 306 1 659 241 35 35 chr5 39055514 39055796 -164029736 + MER33 DNA MER1_type 1 282 -42 777 199 32 48 chr5 39056272 39056458 -164029074 - AluJo SINE Alu -126 186 4 2370 100 3 0 chr5 39056506 39056817 -164028715 - AluSp SINE Alu -1 312 1 843 154 6 13 chr5 39056884 39057040 -164028492 - L1MB8 LINE L1 -6 6172 6018 2092 49 0 39 chr5 39058395 39058701 -164026831 - AluY SINE Alu -17 294 1 337 287 178 0 chr5 39058921 39059078 -164026454 - MER5A DNA MER1_type -4 185 1 733 173 0 8 chr5 39059779 39059912 -164025620 + FLAM_C SINE Alu 2 133 0 1470 124 151 4 chr5 39059991 39060256 -164025276 + L1PB2 LINE L1 5848 6151 0 315 309 24 8 chr5 39060294 39060417 -164025115 + MIR3 SINE MIR 38 162 -46 1876 118 39 69 chr5 39060933 39061322 -164024210 + L1MA8 LINE L1 5913 6289 -2 25 0 0 0 chr5 39061834 39061859 -164023673 + AT_rich Low_complexity Low_complexity 1 25 0 559 321 25 13 chr5 39063509 39063746 -164021786 - MIR SINE MIR 0 262 23 1877 153 0 7 chr5 39063802 39064097 -164021435 + AluJb SINE Alu 6 298 -14 341 309 51 39 chr5 39064142 39064267 -164021265 + MIR SINE MIR 77 206 -56 2116 111 3 3 chr5 39064267 39064587 -164020945 + AluSp SINE Alu 1 313 0 341 309 51 39 chr5 39064587 39064639 -164020893 + MIR SINE MIR 206 256 -6 2322 103 0 7 chr5 39066661 39066962 -164018570 + AluSx SINE Alu 5 303 -9 862 82 0 0 chr5 39067123 39067233 -164018299 + AluY SINE Alu 195 304 -7 21 57 0 0 chr5 39067288 39067323 -164018209 + AT_rich Low_complexity Low_complexity 1 35 0 2458 151 42 24 chr5 39067468 39067926 -164017606 - MLT1C LTR MaLR -1 466 1 548 305 5 11 chr5 39068159 39068346 -164017186 - MIR SINE MIR -12 250 65 2004 135 0 4 chr5 39069595 39069876 -164015656 - AluSx SINE Alu -32 280 1 302 291 71 44 chr5 39069944 39070126 -164015406 - MLT1J LTR MaLR 0 511 325 1357 155 39 11 chr5 39070131 39070415 -164015117 + MER33 DNA MER1_type 1 292 -32 1724 174 0 44 chr5 39070475 39070792 -164014740 - AluJo SINE Alu -5 307 5 2409 81 7 0 chr5 39070805 39071112 -164014420 - AluY SINE Alu -2 309 1 233 258 108 0 chr5 39071141 39071234 -164014298 - MLT1J LTR MaLR -316 195 93 2280 121 0 0 chr5 39071525 39071831 -164013701 + AluSx SINE Alu 1 306 -6 2531 87 3 0 chr5 39071831 39072143 -164013389 + AluSp SINE Alu 1 313 0 237 322 11 0 chr5 39072596 39072683 -164012849 - L3 LINE CR1 -562 1015 928 439 191 0 17 chr5 39072794 39072909 -164012623 + C-rich Low_complexity Low_complexity 3 115 0 203 329 0 14 chr5 39072909 39072979 -164012553 + MIR SINE MIR 118 186 -76 212 269 45 0 chr5 39073034 39073101 -164012431 + L2 LINE L2 3203 3272 0 239 296 93 19 chr5 39073852 39073960 -164011572 - MIR SINE MIR -34 228 113 1898 172 61 4 chr5 39073968 39074365 -164011167 - MLT1C LTR MaLR 0 467 2 4562 129 63 14 chr5 39075732 39076490 -164009042 + MER4E LTR ERV1 1 768 -11 2128 117 0 7 chr5 39076493 39076792 -164008740 - AluSq SINE Alu -16 297 1 1184 158 20 5 chr5 39076962 39077158 -164008374 + AluSg/x SINE Alu 85 283 -29 2263 105 7 0 chr5 39077390 39077684 -164007848 - AluSp SINE Alu -17 296 1 305 258 139 41 chr5 39077696 39077940 -164007592 + L1ME4a LINE L1 5688 5955 -166 393 174 174 110 chr5 39078248 39078442 -164007090 - MER69 DNA AcHobo 0 2526 1 810 177 16 43 chr5 39078619 39078805 -164006727 + MER5A DNA MER1_type 1 181 -8 264 269 10 19 chr5 39079183 39079287 -164006245 + MIR SINE MIR 104 206 -56 609 206 7 39 chr5 39079519 39079639 -164005893 + MER3 DNA MER1_type 19 134 -28 746 167 8 8 chr5 39079639 39079771 -164005761 - FLAM_A SINE Alu -1 132 1 609 206 7 39 chr5 39079771 39079805 -164005727 + MER3 DNA MER1_type 134 168 -41 1495 186 71 8 chr5 39079809 39080175 -164005357 + MER3 DNA MER1_type 2235 2623 0 2414 101 3 0 chr5 39080317 39080625 -164004907 - AluSp SINE Alu -4 309 1 250 280 106 8 chr5 39081773 39081863 -164003669 + MIR3 SINE MIR 56 164 -44 2268 90 3 3 chr5 39081863 39082153 -164003379 + AluSx SINE Alu 1 290 -22 250 280 106 8 chr5 39082153 39082194 -164003338 + MIR3 SINE MIR 164 200 -8 2447 70 3 0 chr5 39082879 39083179 -164002353 - AluSp SINE Alu -12 301 1 1575 189 50 0 chr5 39083549 39083829 -164001703 + AluJo SINE Alu 11 304 -8 2046 108 4 7 chr5 39083863 39084142 -164001390 + AluSx SINE Alu 21 298 -14 294 287 40 46 chr5 39084293 39084467 -164001065 - MER5B DNA MER1_type -5 173 1 941 186 91 57 chr5 39084775 39085071 -164000461 - MLT1C LTR MaLR 0 467 162 371 264 32 16 chr5 39085256 39085381 -164000151 - MER5A DNA MER1_type -1 188 62 304 267 93 47 chr5 39085528 39085693 -163999839 + MLT1J LTR MaLR 7 179 -332 2086 146 22 32 chr5 39085693 39085805 -163999727 + MLT1A1 LTR MaLR 1 113 -252 1373 134 102 130 chr5 39085805 39086266 -163999266 - LTR7 LTR ERV1 -2 448 1 2086 146 22 32 chr5 39086266 39086522 -163999010 + MLT1A1 LTR MaLR 113 365 0 365 330 74 26 chr5 39086597 39086867 -163998665 + MLT1J LTR MaLR 229 511 0 427 206 152 0 chr5 39087417 39087509 -163998023 + MER103 DNA DNA 12 117 -49 25 0 0 0 chr5 39087546 39087571 -163997961 + AT_rich Low_complexity Low_complexity 1 25 0 230 162 0 0 chr5 39087807 39087844 -163997688 - L1PB3 LINE L1 -107 6047 6011 285 139 0 0 chr5 39088076 39088119 -163997413 - FRAM/FAM SINE Alu -94 72 30 624 234 0 8 chr5 39088254 39088378 -163997154 - FLAM_C SINE Alu -20 123 1 2374 86 7 0 chr5 39088478 39088779 -163996753 - AluSg SINE Alu -7 303 1 2911 153 24 16 chr5 39089621 39090129 -163995403 - MER41E LTR ERV1 0 512 1 256 247 171 73 chr5 39090252 39090527 -163995005 + L2 LINE L2 3012 3313 0 2185 126 0 7 chr5 39091090 39091391 -163994141 - AluSq SINE Alu -14 299 1 195 162 0 0 chr5 39091746 39091783 -163993749 + (TG)n Simple_repeat Simple_repeat 2 38 0 481 250 29 36 chr5 39093328 39093500 -163992032 + MIR SINE MIR 21 188 -62 1328 273 128 11 chr5 39093673 39094205 -163991327 - MLT1G1 LTR MaLR 0 595 2 27 0 0 0 chr5 39094669 39094696 -163990836 + AT_rich Low_complexity Low_complexity 1 27 0 2732 42 0 0 chr5 39095080 39095387 -163990145 - AluY SINE Alu -3 308 2 676 164 16 8 chr5 39095527 39095655 -163989877 - FLAM_A SINE Alu 0 142 14 203 272 22 33 chr5 39095751 39095843 -163989689 + CT-rich Low_complexity Low_complexity 6 96 0 321 242 0 33 chr5 39095948 39096039 -163989493 + L1MC4 LINE L1 6615 6702 -1340 234 228 18 0 chr5 39096041 39096098 -163989434 + (TA)n Simple_repeat Simple_repeat 2 59 0 2039 123 7 10 chr5 39096397 39096690 -163988842 - AluSx SINE Alu -20 292 1 1270 156 72 99 chr5 39096806 39097165 -163988367 + MLT1B LTR MaLR 1 465 -2 1852 115 0 0 chr5 39097245 39097489 -163988043 + AluSx SINE Alu 2 245 -67 1871 102 3 98 chr5 39097494 39097799 -163987733 + AluSq SINE Alu 27 302 -11 282 141 0 0 chr5 39097845 39097899 -163987633 - MLT2B1 LTR ERVL -1 512 354 1845 191 52 10 chr5 39097932 39098303 -163987229 - MLT2D LTR ERVL -41 479 1 2263 107 3 3 chr5 39098696 39098996 -163986536 - AluSx SINE Alu -12 300 1 2175 115 14 0 chr5 39100364 39100659 -163984873 + AluSq SINE Alu 1 299 -14 685 142 0 35 chr5 39100775 39100888 -163984644 + AluJo SINE Alu 2 110 -202 2028 143 143 11 chr5 39100891 39101269 -163984263 - MSTA LTR MaLR 0 428 1 2255 124 22 9 chr5 39101285 39101607 -163983925 + THE1B LTR MaLR 39 364 0 10145 100 87 4 chr5 39101607 39103065 -163982467 + THE1B-int LTR MaLR 1 1579 -1 2419 109 28 11 chr5 39103066 39103424 -163982108 + THE1B LTR MaLR 1 364 0 881 131 80 62 chr5 39103424 39103600 -163981932 + AluJo SINE Alu 108 286 -26 334 264 18 27 chr5 39103615 39103725 -163981807 + L1MC5 LINE L1 7711 7819 -142 1599 159 64 0 chr5 39103764 39104028 -163981504 + AluJb SINE Alu 1 281 -31 27 62 0 0 chr5 39104096 39104144 -163981388 + AT_rich Low_complexity Low_complexity 1 48 0 1562 241 52 47 chr5 39104184 39104803 -163980729 + L1MC5 LINE L1 7239 7860 -101 1901 160 3 13 chr5 39105071 39105378 -163980154 + AluSx SINE Alu 1 304 -8 2322 112 0 3 chr5 39105381 39105695 -163979837 + AluSq SINE Alu 1 313 0 2087 111 11 0 chr5 39107120 39107399 -163978133 - AluSx SINE Alu -11 301 20 266 134 37 12 chr5 39107427 39107509 -163978023 + (TA)n Simple_repeat Simple_repeat 2 85 0 196 270 230 0 chr5 39107885 39107985 -163977547 + L2 LINE L2 3191 3313 0 2275 98 10 0 chr5 39109339 39109635 -163975897 - AluSg SINE Alu -7 303 5 255 235 35 12 chr5 39110642 39110727 -163974805 - MIR SINE MIR -3 259 173 2213 82 7 7 chr5 39110803 39111095 -163974437 + AluSx SINE Alu 1 292 -20 894 140 0 22 chr5 39111251 39111387 -163974145 - FLAM_C SINE Alu 0 133 1 2156 175 0 3 chr5 39111549 39111880 -163973652 + MER1B DNA MER1_type 1 330 -9 1884 145 20 20 chr5 39112166 39112469 -163973063 + AluJo SINE Alu 6 308 -4 807 148 7 22 chr5 39112827 39112962 -163972570 + FLAM_C SINE Alu 1 133 0 874 228 75 47 chr5 39113818 39114072 -163971460 - MIR SINE MIR 0 262 2 321 248 41 74 chr5 39114371 39114464 -163971068 - L2 LINE L2 0 3272 3182 2153 90 35 10 chr5 39114464 39114754 -163970778 + AluSx SINE Alu 1 297 -15 321 248 41 74 chr5 39114754 39114781 -163970751 - L2 LINE L2 -90 3182 3156 478 212 157 2 chr5 39115951 39116093 -163969439 - MIR SINE MIR -58 150 1 202 264 19 0 chr5 39116645 39116698 -163968834 + L2 LINE L2 3210 3263 -9 219 261 43 29 chr5 39117096 39117165 -163968367 + MER5B DNA MER1_type 92 161 -17 2099 106 3 3 chr5 39117333 39117648 -163967884 - AluSg SINE Alu 0 315 1 1701 223 75 27 chr5 39117821 39118260 -163967272 - MLT1C LTR MaLR -1 466 7 503 236 115 0 chr5 39119266 39119414 -163966118 + MIR SINE MIR 2 166 -96 1678 212 80 30 chr5 39119422 39119860 -163965672 - MLT1C LTR MaLR -2 465 6 2517 70 0 0 chr5 39120790 39121091 -163964441 - AluY SINE Alu -10 301 1 2077 80 0 15 chr5 39121091 39121353 -163964179 - AluSx SINE Alu -16 296 39 2877 73 0 0 chr5 39121460 39121815 -163963717 + THE1A LTR MaLR 1 355 0 443 206 95 0 chr5 39121888 39122014 -163963518 + MIR SINE MIR 85 222 -40 27 0 0 0 chr5 39122384 39122411 -163963121 + AT_rich Low_complexity Low_complexity 1 27 0 286 246 31 54 chr5 39122485 39122615 -163962917 - L2 LINE L2 -23 3249 3123 790 114 8 30 chr5 39123382 39123513 -163962019 + FLAM_C SINE Alu 16 143 0 209 269 224 30 chr5 39124763 39124964 -163960568 - MIR SINE MIR -3 259 20 231 267 27 27 chr5 39125063 39125138 -163960394 + Charlie4 DNA MER1_type 1883 1957 -4 2367 86 7 0 chr5 39125536 39125838 -163959694 - AluSp SINE Alu -9 304 1 2042 77 70 18 chr5 39125842 39126128 -163959404 - AluSq SINE Alu -10 303 3 578 319 21 7 chr5 39126161 39126440 -163959092 - L1ME3A LINE L1 -208 5962 5680 305 290 65 26 chr5 39126613 39126768 -163958764 - MER5A DNA MER1_type 0 189 29 253 345 42 0 chr5 39126814 39126956 -163958576 + L3b LINE CR1 1117 1264 -319 423 0 0 0 chr5 39127383 39127391 -163958141 + (TG)n Simple_repeat Simple_repeat 1 55 0 423 0 0 0 chr5 39127391 39127438 -163958094 + (TG)n Simple_repeat Simple_repeat 2 48 0 1088 151 0 0 chr5 39127459 39127618 -163957914 - AluSg/x SINE Alu -16 294 136 272 266 115 0 chr5 39127621 39127734 -163957798 + MER112 DNA MER1_type 39 164 -96 2237 98 3 19 chr5 39128183 39128321 -163957211 + AluSq SINE Alu 1 140 -173 2335 107 0 0 chr5 39128321 39128619 -163956913 + AluSc SINE Alu 1 298 -11 2237 98 3 19 chr5 39128619 39128787 -163956745 + AluSq SINE Alu 140 302 -11 641 193 67 0 chr5 39129094 39129213 -163956319 - FLAM_A SINE Alu -5 128 2 465 120 53 0 chr5 39130132 39130207 -163955325 - MER3 DNA MER1_type -73 136 58 * 886 184 34 63 chr5 39130198 39130405 -163955127 - MER20 DNA MER1_type -18 201 1 311 219 37 12 chr5 39130405 39130471 -163955061 - MER3 DNA MER1_type -130 79 12 265 214 41 92 chr5 39130561 39130659 -163954873 - MIR SINE MIR -131 131 39 398 195 228 34 chr5 39132832 39132981 -163952551 + MIR SINE MIR 21 198 -64 406 123 0 0 chr5 39132984 39133041 -163952491 - LTR16C LTR ERVL -5 486 430 715 181 9 0 chr5 39133280 39133396 -163952136 - FLAM_A SINE Alu -16 117 1 1002 219 17 0 chr5 39133397 39133575 -163951957 + MER58A DNA MER1_type 42 222 -2 368 259 0 0 chr5 39133586 39133667 -163951865 - LTR16C LTR ERVL -219 272 192 2161 130 0 3 chr5 39133668 39133967 -163951565 + AluSx SINE Alu 1 298 -14 3645 113 43 0 chr5 39134017 39134523 -163951009 + MER1A DNA MER1_type 2 529 0 467 129 47 12 chr5 39134692 39134777 -163950755 - AluSc SINE Alu -8 301 214 2032 78 0 0 chr5 39134777 39135019 -163950513 - AluSc SINE Alu -50 259 18 283 222 7 68 chr5 39135026 39135129 -163950403 - MER5B DNA MER1_type -45 133 45 1743 174 17 26 chr5 39135414 39135764 -163949768 - L1MB5 LINE L1 -8 6166 5820 1284 170 146 0 chr5 39135893 39136044 -163949488 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 39136044 39136073 -163949459 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1284 170 146 0 chr5 39136073 39136168 -163949364 - AluJb SINE Alu -147 155 1 684 200 8 8 chr5 39136484 39136614 -163948918 - FLAM_A SINE Alu 0 133 4 426 69 0 0 chr5 39137610 39137668 -163947864 + (TG)n Simple_repeat Simple_repeat 2 59 0 1994 111 36 4 chr5 39138552 39138831 -163946701 - AluSq SINE Alu -24 289 2 529 205 96 24 chr5 39138937 39139103 -163946429 - MER5B DNA MER1_type 0 178 1 234 0 0 0 chr5 39139223 39139249 -163946283 + (TC)n Simple_repeat Simple_repeat 1 26 0 2530 107 6 8 chr5 39139525 39139881 -163945651 + THE1A LTR MaLR 1 355 0 11615 97 8 9 chr5 39139881 39141464 -163944068 + THE1A-int LTR MaLR 1 1580 0 2394 118 8 8 chr5 39141464 39141819 -163943713 + THE1A LTR MaLR 1 355 0 358 295 9 9 chr5 39141960 39142072 -163943460 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 39142259 39142300 -163943232 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1966 125 3 19 chr5 39142559 39142871 -163942661 + THE1-int LTR MaLR 929 1235 -345 556 125 0 0 chr5 39142869 39142949 -163942583 - THE1-int LTR MaLR -572 1008 929 * 182 298 0 0 chr5 39143247 39143304 -163942228 - L2 LINE L2 -61 3252 3196 2165 126 0 0 chr5 39143393 39143686 -163941846 + AluSx SINE Alu 3 295 -17 217 314 141 13 chr5 39144263 39144419 -163941113 - MIR3 SINE MIR -5 203 28 1922 138 7 10 chr5 39144424 39144713 -163940819 - AluSx SINE Alu -24 288 1 395 283 139 0 chr5 39144739 39144905 -163940627 - MER5A DNA MER1_type 0 189 1 482 295 108 0 chr5 39145263 39145488 -163940044 - L2 LINE L2 -292 3021 2774 31 76 0 0 chr5 39145488 39145554 -163939978 + AT_rich Low_complexity Low_complexity 1 66 0 340 266 18 28 chr5 39145820 39145929 -163939603 + MIR3 SINE MIR 86 193 -15 1921 141 0 38 chr5 39146582 39146895 -163938637 - AluJb SINE Alu -9 303 3 639 238 38 61 chr5 39146933 39147023 -163938509 + MIR SINE MIR 8 99 -163 532 114 13 0 chr5 39147023 39147102 -163938430 + MADE1 DNA Mariner 1 80 0 639 238 38 61 chr5 39147102 39147272 -163938260 + MIR SINE MIR 99 262 0 2500 135 28 6 chr5 39147854 39148601 -163936931 + L1MA4A LINE L1 4900 5665 -638 5557 163 21 23 chr5 39148604 39148757 -163936775 + L1MA3 LINE L1 4126 4278 -1868 1867 137 3 56 chr5 39148757 39149079 -163936453 + AluSx SINE Alu 3 307 -5 5557 163 21 23 chr5 39149079 39150135 -163935397 + L1MA3 LINE L1 4278 5332 -814 741 138 9 0 chr5 39150143 39150252 -163935280 + FLAM_C SINE Alu 9 118 -25 5918 98 19 37 chr5 39150269 39151208 -163934324 + L1MA3 LINE L1 5321 6242 -63 1838 176 0 3 chr5 39151208 39151498 -163934034 + AluJb SINE Alu 1 289 -23 5918 98 19 37 chr5 39151498 39151561 -163933971 + L1MA3 LINE L1 6242 6305 0 1983 142 16 7 chr5 39151571 39151874 -163933658 + AluSx SINE Alu 1 306 -6 2723 132 50 73 chr5 39151874 39152182 -163933350 + L1MA4A LINE L1 5661 5974 -329 2323 111 3 0 chr5 39152182 39152488 -163933044 + AluSx SINE Alu 1 307 -5 2723 132 50 73 chr5 39152488 39152829 -163932703 + L1MA4A LINE L1 5974 6297 -6 380 232 211 25 chr5 39152896 39153048 -163932484 - MER5A DNA MER1_type -1 188 9 586 119 0 0 chr5 39153095 39153179 -163932353 + AluJ/FLAM SINE Alu 1 84 -228 553 133 163 0 chr5 39153321 39153419 -163932113 + FLAM_C SINE Alu 4 117 -16 14213 39 10 5 chr5 39153539 39156057 -163929475 + L1PA5 LINE L1 3623 6148 -6 979 177 16 0 chr5 39156265 39156457 -163929075 + L1M4 LINE L1 5484 5678 -500 3330 92 55 8 chr5 39156458 39156946 -163928586 - MER9 LTR ERVK 0 511 1 1875 93 15 0 chr5 39156971 39157246 -163928286 - HERVK9 LTR ERVK -16 7045 5635 10123 97 4 5 chr5 39157329 39158811 -163926721 - HERVK9 LTR ERVK -282 5634 4155 6288 86 3 0 chr5 39158813 39159686 -163925846 - HERVK9 LTR ERVK -2012 3904 3029 * 8684 77 7 0 chr5 39159671 39160859 -163924673 - HERVK9 LTR ERVK -3297 2619 1424 3764 92 10 23 chr5 39160857 39161432 -163924100 - HERVK9 LTR ERVK -5348 568 1 * 2967 123 69 6 chr5 39161432 39161913 -163923619 - MER9 LTR ERVK 0 511 1 2258 189 44 19 chr5 39161914 39162455 -163923077 + L1MB7 LINE L1 5614 6168 -16 1907 159 9 19 chr5 39162599 39162914 -163922618 - AluJb SINE Alu 0 312 1 847 157 18 97 chr5 39162914 39163131 -163922401 - MER20 DNA MER1_type -19 200 1 322 267 155 9 chr5 39163141 39163257 -163922275 + L2 LINE L2 3181 3313 0 2239 115 3 0 chr5 39163383 39163678 -163921854 + AluSx SINE Alu 1 296 -16 207 203 419 0 chr5 39164515 39164589 -163920943 - MIR SINE MIR -118 144 40 219 187 13 27 chr5 39165410 39165485 -163920047 + (TA)n Simple_repeat Simple_repeat 1 74 0 927 240 168 12 chr5 39166305 39166721 -163918811 - LTR33 LTR ERVL -4 517 37 183 283 50 0 chr5 39166833 39166893 -163918639 + L3b LINE CR1 1431 1493 -90 2436 65 7 3 chr5 39166918 39167228 -163918304 - AluY SINE Alu 0 311 1 404 186 67 129 chr5 39168132 39168325 -163917207 + L1ME3A LINE L1 5988 6168 -2 2273 114 0 16 chr5 39168835 39169142 -163916390 + AluSx SINE Alu 1 302 -10 497 313 26 36 chr5 39169285 39169480 -163916052 - MIR3 SINE MIR -6 202 10 205 288 0 45 chr5 39169493 39169559 -163915973 + MIR SINE MIR 32 94 -168 280 302 78 9 chr5 39170000 39170116 -163915416 + MIR SINE MIR 130 253 -9 308 333 77 19 chr5 39170369 39170525 -163915007 + MIR SINE MIR 23 187 -75 2058 136 3 10 chr5 39170808 39171109 -163914423 + AluSx SINE Alu 1 299 -13 315 49 0 0 chr5 39171515 39171556 -163913976 + (CA)n Simple_repeat Simple_repeat 2 42 0 377 294 17 8 chr5 39171556 39171675 -163913857 - MER5B DNA MER1_type -52 126 7 576 259 128 55 chr5 39171973 39172371 -163913161 - MARNA DNA Mariner -84 502 76 2289 92 0 10 chr5 39172728 39173034 -163912498 - AluSx SINE Alu -9 303 1 332 226 174 45 chr5 39173057 39173322 -163912210 - L1ME4a LINE L1 -21 6100 5802 339 44 0 0 chr5 39174177 39174222 -163911310 + (CA)n Simple_repeat Simple_repeat 2 46 0 2413 50 10 3 chr5 39174367 39174667 -163910865 - AluY SINE Alu -9 302 1 2197 84 21 0 chr5 39176142 39176428 -163909104 + AluSx SINE Alu 1 292 -20 1470 169 31 4 chr5 39176469 39176723 -163908809 + AluJo SINE Alu 1 261 -51 896 174 113 15 chr5 39176760 39176955 -163908577 + MER20 DNA MER1_type 1 214 -5 763 11 0 0 chr5 39176959 39177049 -163908483 + 5S rRNA rRNA 1 90 -31 424 297 35 88 chr5 39177246 39177529 -163908003 - L2 LINE L2 -13 3300 3033 1881 147 0 31 chr5 39177948 39178269 -163907263 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 39178353 39178383 -163907149 + AT_rich Low_complexity Low_complexity 1 30 0 2358 99 0 3 chr5 39180237 39180549 -163904983 + AluSx SINE Alu 1 311 -1 596 290 114 65 chr5 39180604 39181509 -163904023 - L2 LINE L2 -48 3224 2273 759 205 165 5 chr5 39181535 39181735 -163903797 + MIR SINE MIR 15 246 -16 240 311 117 49 chr5 39181816 39182288 -163903244 - L2 LINE L2 -1203 2111 1608 1750 166 94 0 chr5 39183423 39183730 -163901802 - MER1B DNA MER1_type -1 336 1 3394 95 36 16 chr5 39183815 39184319 -163901213 + MER75 DNA T2_type 1 514 0 265 147 103 0 chr5 39184426 39184494 -163901038 - Charlie7 DNA MER1_type -2478 134 60 2300 72 7 0 chr5 39187064 39187355 -163898177 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 39189547 39189573 -163895959 + AT_rich Low_complexity Low_complexity 1 26 0 1961 102 0 42 chr5 39189644 39189780 -163895752 + AluSx SINE Alu 1 120 -192 2381 102 0 0 chr5 39189780 39190085 -163895447 + AluSc SINE Alu 1 305 -4 1961 102 0 42 chr5 39190085 39190232 -163895300 + AluSx SINE Alu 120 272 -40 1724 159 65 3 chr5 39190261 39190614 -163894918 + L1MA8 LINE L1 5917 6291 0 670 176 162 31 chr5 39190745 39190967 -163894565 + L1MD3 LINE L1 7745 7995 0 2222 94 13 23 chr5 39191668 39191976 -163893556 + AluY SINE Alu 1 305 -6 2011 232 61 23 chr5 39191979 39192645 -163892887 + L1ME1 LINE L1 5449 6299 -35 942 218 77 2 chr5 39193717 39194067 -163891465 + Charlie4a DNA MER1_type 34 473 -35 845 136 0 0 chr5 39194433 39194583 -163890949 - FLAM_C SINE Alu 0 150 1 1521 132 25 107 chr5 39194978 39195297 -163890235 + AluYb8 SINE Alu 1 293 -25 353 357 97 22 chr5 39195749 39196152 -163889380 - L2 LINE L2 -457 2857 2425 50 92 0 0 chr5 39196761 39196902 -163888630 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 39196912 39196956 -163888576 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 39197350 39197600 -163887932 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 39198152 39198217 -163887315 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 39199340 39199650 -163885882 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 39199686 39199959 -163885573 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 39201606 39202095 -163883437 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 39202440 39202676 -163882856 - L2 LINE L2 -11 3261 2993 760 317 79 22 chr5 39202815 39203222 -163882310 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 39203612 39203792 -163881740 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 39203781 39203834 -163881698 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 39203835 39203870 -163881662 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 39203882 39204135 -163881397 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 39204680 39204960 -163880572 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 39208279 39208498 -163877034 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 39209230 39209581 -163875951 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 39209703 39210188 -163875344 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 39210272 39210360 -163875172 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 39210436 39210758 -163874774 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 39210765 39211073 -163874459 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 39211096 39211224 -163874308 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 39211258 39211428 -163874104 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 39211930 39212227 -163873305 + AluSx SINE Alu 1 298 -14 1783 85 55 27 chr5 39214585 39214878 -163870654 - AluSx SINE Alu -8 304 4 1341 119 30 5 chr5 39215532 39215757 -163869775 + AluSg/x SINE Alu 77 306 0 22 35 0 0 chr5 39215861 39215890 -163869642 + AT_rich Low_complexity Low_complexity 1 29 0 878 237 76 0 chr5 39215990 39216201 -163869331 - MIR SINE MIR -8 254 28 1985 151 10 0 chr5 39216202 39216506 -163869026 - AluJb SINE Alu -3 309 3 1257 183 28 0 chr5 39216537 39216750 -163868782 - MER20 DNA MER1_type 0 219 1 1305 167 139 0 chr5 39216758 39217039 -163868493 - MER33 DNA MER1_type 0 324 5 2332 178 23 16 chr5 39217110 39217538 -163867994 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 39217538 39217799 -163867733 - AluSx SINE Alu -33 279 1 303 154 39 0 chr5 39218369 39218421 -163867111 - MER66A LTR ERV1 -141 337 284 198 231 154 77 chr5 39218508 39218651 -163866881 - L2 LINE L2 0 3313 3160 246 265 48 24 chr5 39218750 39218833 -163866699 - L2 LINE L2 -220 3052 2968 313 111 0 0 chr5 39219084 39219129 -163866403 - LTR12 LTR ERV1 -318 396 352 198 0 0 0 chr5 39219131 39219153 -163866379 + (A)n Simple_repeat Simple_repeat 1 22 0 196 325 38 12 chr5 39219700 39219780 -163865752 - MIR3 SINE MIR -15 193 112 467 286 170 6 chr5 39219792 39219963 -163865569 - MIR SINE MIR -2 260 62 1444 197 48 7 chr5 39220606 39220895 -163864637 + AluJb SINE Alu 1 301 -11 2467 81 0 7 chr5 39220969 39221279 -163864253 + AluSx SINE Alu 1 308 -4 402 21 0 0 chr5 39221279 39221353 -163864179 + (TG)n Simple_repeat Simple_repeat 1 121 0 402 21 0 0 chr5 39221353 39221400 -163864132 + (TG)n Simple_repeat Simple_repeat 2 48 0 483 135 0 0 chr5 39222103 39222177 -163863355 + L1MA10 LINE L1 6254 6327 -7 279 316 71 65 chr5 39222723 39222891 -163862641 - MIR SINE MIR -79 183 15 990 277 87 27 chr5 39223068 39223630 -163861902 - L2 LINE L2 -4 3309 2698 1676 230 40 44 chr5 39223634 39224230 -163861302 + L1MC5 LINE L1 6923 7516 -445 517 214 125 36 chr5 39224289 39224537 -163860995 + L1MC5 LINE L1 7644 7913 -48 579 288 64 17 chr5 39224548 39224784 -163860748 - L2 LINE L2 -611 2703 2457 405 213 197 16 chr5 39225181 39225308 -163860224 - MIR SINE MIR 0 262 113 273 325 147 45 chr5 39226465 39226730 -163858802 - L2 LINE L2 0 3272 2981 915 154 0 0 chr5 39226747 39226877 -163858655 - FLAM_C SINE Alu -3 130 1 2631 122 8 3 chr5 39227434 39227796 -163857736 - THE1B LTR MaLR 0 364 1 2141 108 4 0 chr5 39227941 39228219 -163857313 + AluSx SINE Alu 1 279 -33 918 261 139 14 chr5 39230091 39230592 -163854940 + L1MC4a LINE L1 5598 6189 -1619 510 189 71 77 chr5 39230763 39230932 -163854600 - MER46A DNA MER2_type -65 171 4 * 1028 150 24 12 chr5 39230789 39230956 -163854576 + MER46A DNA MER2_type 1 169 -67 1574 106 10 0 chr5 39231056 39231264 -163854268 + AluSc SINE Alu 80 289 -20 343 302 71 8 chr5 39231635 39231761 -163853771 - MER5A DNA MER1_type -1 188 55 225 281 45 34 chr5 39231768 39231857 -163853675 - MER5A DNA MER1_type -97 92 3 537 32 0 0 chr5 39232104 39232166 -163853366 + AluS SINE Alu 3 64 -249 520 108 0 0 chr5 39232266 39232340 -163853192 - AluSc SINE Alu -201 108 35 2201 122 10 0 chr5 39232401 39232704 -163852828 + AluJb SINE Alu 1 306 -6 308 325 88 9 chr5 39232864 39232978 -163852554 - MIR SINE MIR -118 144 22 543 228 69 73 chr5 39233000 39233019 -163852513 + MIR SINE MIR 22 40 -222 593 219 50 8 chr5 39233019 39233138 -163852394 - FLAM_A SINE Alu -8 125 2 543 228 69 73 chr5 39233138 39233351 -163852181 + MIR SINE MIR 40 253 -9 721 274 51 8 chr5 39233472 39233706 -163851826 + MIR SINE MIR 12 255 -7 1422 102 0 0 chr5 39234614 39234801 -163850731 + AluY SINE Alu 125 311 0 1045 205 186 53 chr5 39234864 39235186 -163850346 - MLT1A1 LTR MaLR 0 365 1 374 206 82 10 chr5 39235854 39235951 -163849581 + Charlie7 DNA MER1_type 5 108 -2504 481 295 104 33 chr5 39236728 39236969 -163848563 + MIR SINE MIR 5 262 0 184 333 134 18 chr5 39237672 39237843 -163847689 + L2 LINE L2 1785 1975 -1339 1480 162 4 4 chr5 39239564 39239799 -163845733 - MLT1A1 LTR MaLR -119 246 12 337 374 8 0 chr5 39240107 39240230 -163845302 - MER5A DNA MER1_type -3 186 63 222 118 0 0 chr5 39241125 39241159 -163844373 + (CATA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr5 39241385 39241405 -163844127 + (T)n Simple_repeat Simple_repeat 1 20 0 631 290 11 11 chr5 39241579 39241762 -163843770 - MIR SINE MIR -60 202 20 1084 231 61 95 chr5 39241775 39242005 -163843527 - L1MC4 LINE L1 0 8042 7806 1450 189 63 14 chr5 39242005 39242166 -163843366 - AluJb SINE Alu -13 299 116 189 0 0 0 chr5 39242166 39242187 -163843345 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1450 189 63 14 chr5 39242187 39242310 -163843222 - AluJb SINE Alu -196 116 1 1084 231 61 95 chr5 39242310 39242603 -163842929 - L1MC4 LINE L1 -236 7806 7537 6030 162 46 18 chr5 39243010 39243210 -163842322 - L1 LINE L1 -1679 4467 4274 306 50 0 0 chr5 39243210 39243250 -163842282 + (TG)n Simple_repeat Simple_repeat 1 40 0 6030 162 46 18 chr5 39243250 39244245 -163841287 - L1 LINE L1 -1872 4274 3239 1865 151 16 16 chr5 39244699 39245011 -163840521 - AluJb SINE Alu 0 312 1 369 0 0 0 chr5 39245109 39245150 -163840382 + (TG)n Simple_repeat Simple_repeat 2 42 0 544 237 34 8 chr5 39245288 39245406 -163840126 - L2 LINE L2 -5 3308 3188 1984 104 49 3 chr5 39245715 39246002 -163839530 + AluSq SINE Alu 1 300 -13 2193 100 14 0 chr5 39246835 39247124 -163838408 + AluSx SINE Alu 5 297 -15 482 266 6 57 chr5 39248334 39248492 -163837040 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 39249083 39249105 -163836427 + (TGG)n Simple_repeat Simple_repeat 2 23 0 587 234 63 0 chr5 39249147 39249305 -163836227 - MER5B DNA MER1_type -10 168 1 431 251 64 61 chr5 39250417 39250597 -163834935 - MIR SINE MIR -48 214 31 309 241 13 13 chr5 39251335 39251414 -163834118 - MIR SINE MIR -28 234 156 625 230 118 6 chr5 39251414 39251575 -163833957 - AluJo SINE Alu -13 299 121 261 269 54 46 chr5 39251831 39251961 -163833571 - L1ME4a LINE L1 -1 6120 5990 329 270 95 14 chr5 39252001 39252149 -163833383 - L1ME4a LINE L1 -205 5916 5757 650 261 31 36 chr5 39253758 39253953 -163831579 - MIR SINE MIR -61 201 8 380 239 0 72 chr5 39254130 39254268 -163831264 - MIR SINE MIR -1 261 134 564 231 82 14 chr5 39254359 39254569 -163830963 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 39255828 39255884 -163829648 + AT_rich Low_complexity Low_complexity 1 56 0 4548 201 92 75 chr5 39256119 39256445 -163829087 + L1M4 LINE L1 3435 3754 -2392 234 250 0 0 chr5 39256445 39256489 -163829043 - 5S rRNA rRNA -77 44 1 4548 201 92 75 chr5 39256489 39257708 -163827824 + L1M4 LINE L1 3754 5050 -1096 1273 200 4 39 chr5 39257750 39258005 -163827527 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 39258238 39258265 -163827267 + AT_rich Low_complexity Low_complexity 1 27 0 2372 104 0 0 chr5 39258493 39258800 -163826732 + AluSx SINE Alu 1 307 -5 265 242 33 22 chr5 39259544 39259635 -163825897 + L1M4 LINE L1 784 875 -5667 1066 177 100 9 chr5 39259697 39259917 -163825615 + L1MCa LINE L1 17 256 -6170 8625 196 55 69 chr5 39259919 39260289 -163825243 + L1MCa LINE L1 1800 2174 -4252 953 206 0 0 chr5 39260289 39260454 -163825078 + FRAM SINE Alu 1 165 -1 8625 196 55 69 chr5 39260454 39260986 -163824546 + L1MCa LINE L1 2174 2712 -3714 3181 79 56 7 chr5 39260986 39261418 -163824114 - MLT2A2 LTR ERVL 0 453 1 8625 196 55 69 chr5 39261418 39262494 -163823038 + L1MCa LINE L1 2712 3801 -2625 1599 79 5 0 chr5 39262494 39262708 -163822824 + L1PA7 LINE L1 5936 6150 -4 8625 196 55 69 chr5 39262708 39263123 -163822409 + L1MCa LINE L1 3801 4220 -2206 2425 109 0 0 chr5 39263123 39263436 -163822096 - AluSq SINE Alu 0 313 1 8625 196 55 69 chr5 39263436 39263932 -163821600 + L1MCa LINE L1 4220 4721 -1705 752 197 8 0 chr5 39263932 39264064 -163821468 + FLAM_A SINE Alu 1 133 0 8625 196 55 69 chr5 39264064 39264345 -163821187 + L1MCa LINE L1 4721 5054 -1372 3803 156 31 9 chr5 39264345 39265046 -163820486 + L1PB4 LINE L1 5437 6153 -3 2197 104 0 0 chr5 39265428 39265708 -163819824 + AluSc SINE Alu 1 280 -29 431 218 128 38 chr5 39265808 39266019 -163819513 - LTR30 LTR ERV1 -256 466 237 1766 198 17 83 chr5 39266217 39266686 -163818846 - MER57-int LTR ERV1 -1716 5821 5384 352 140 0 0 chr5 39266686 39266736 -163818796 + AluJ/FRAM SINE Alu 233 282 -20 231 167 0 0 chr5 39266704 39266740 -163818792 + Alu SINE Alu 84 119 -14 * 1951 132 0 17 chr5 39267679 39267968 -163817564 + AluJo SINE Alu 9 292 -20 1547 167 0 37 chr5 39268353 39268623 -163816909 - AluJo SINE Alu -25 287 28 185 0 40 0 chr5 39268713 39268738 -163816794 + (TTG)n Simple_repeat Simple_repeat 2 27 0 510 109 0 6 chr5 39271175 39271415 -163814117 + AluSx SINE Alu 1 290 -22 572 194 0 0 chr5 39271446 39271549 -163813983 + FLAM_A SINE Alu 6 108 -34 436 85 0 0 chr5 39271749 39271808 -163813724 + AluSg SINE Alu 2 60 -249 2345 106 0 0 chr5 39271880 39272183 -163813349 + AluSq SINE Alu 1 303 -10 1825 114 0 0 chr5 39272371 39272616 -163812916 + AluSg SINE Alu 62 306 -4 613 208 59 50 chr5 39272709 39272844 -163812688 - L2 LINE L2 -19 3294 3155 1720 138 66 14 chr5 39272844 39273133 -163812399 + AluJo SINE Alu 1 304 -8 613 208 59 50 chr5 39273133 39273218 -163812314 - L2 LINE L2 -158 3155 3072 1756 112 90 14 chr5 39273218 39273410 -163812122 - AluSq SINE Alu -14 299 123 1666 109 0 4 chr5 39273410 39273640 -163811892 - AluSg/x SINE Alu -3 307 79 3918 197 31 49 chr5 39273640 39274626 -163810906 - LTR5 LTR ERVK 0 969 1 1756 112 90 14 chr5 39274626 39274710 -163810822 - AluSq SINE Alu -189 124 1 2064 128 7 0 chr5 39275981 39276270 -163809262 + AluSq SINE Alu 1 291 -22 982 147 40 17 chr5 39276288 39276465 -163809067 + AluSx SINE Alu 1 181 -131 321 162 40 27 chr5 39276465 39276539 -163808993 + AluY SINE Alu 46 120 -181 1226 142 82 92 chr5 39276725 39276835 -163808697 + AluJo SINE Alu 19 129 -183 2151 117 3 10 chr5 39276835 39277133 -163808399 + AluSq SINE Alu 1 296 -17 1226 142 82 92 chr5 39277133 39277304 -163808228 + AluJo SINE Alu 129 297 -15 355 246 182 5 chr5 39277634 39277821 -163807711 + L1M4 LINE L1 4080 4299 -1847 224 226 16 0 chr5 39277821 39277883 -163807649 + (CA)n Simple_repeat Simple_repeat 2 64 0 2216 105 7 3 chr5 39277891 39278186 -163807346 - AluSx SINE Alu -16 296 1 1557 158 34 47 chr5 39278635 39278933 -163806599 - AluJb SINE Alu -10 302 9 1239 214 134 51 chr5 39278978 39279236 -163806296 + L1M4 LINE L1 4385 4620 -1526 2401 99 0 0 chr5 39279236 39279540 -163805992 + AluSx SINE Alu 1 304 -8 1239 214 134 51 chr5 39279540 39279596 -163805936 + L1M4 LINE L1 4620 4670 -1476 2745 36 0 0 chr5 39279596 39279901 -163805631 + AluY SINE Alu 1 305 -6 1239 214 134 51 chr5 39279901 39280198 -163805334 + L1M4 LINE L1 4670 5048 -1098 1074 191 106 0 chr5 39280302 39280538 -163804994 + MER57A LTR ERV1 142 402 -1 286 339 65 11 chr5 39280676 39280862 -163804670 + L2 LINE L2 2856 3051 -221 209 254 34 0 chr5 39280967 39281026 -163804506 - MIR SINE MIR -19 243 183 321 324 21 41 chr5 39281038 39281183 -163804349 + L2 LINE L2 3116 3257 -15 2188 137 0 9 chr5 39282021 39282336 -163803196 + AluSx SINE Alu 1 312 0 200 214 24 0 chr5 39282518 39282560 -163802972 + (CA)n Simple_repeat Simple_repeat 1 43 0 217 286 0 26 chr5 39282635 39282712 -163802820 - L2 LINE L2 -12 3301 3227 180 77 0 0 chr5 39282744 39282770 -163802762 + (CAAT)n Simple_repeat Simple_repeat 3 28 0 455 283 17 11 chr5 39282906 39283083 -163802449 + (TGAA)n Simple_repeat Simple_repeat 3 180 0 237 119 0 0 chr5 39283147 39283189 -163802343 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 1266 216 0 8 chr5 39283389 39283644 -163801888 + L1PB4 LINE L1 5892 6144 -12 1892 89 0 0 chr5 39283645 39283881 -163801651 + AluY SINE Alu 60 295 -16 213 292 0 26 chr5 39284397 39284510 -163801022 + CT-rich Low_complexity Low_complexity 1 110 0 310 377 0 22 chr5 39284575 39284758 -163800774 + CT-rich Low_complexity Low_complexity 2 180 0 * 345 343 0 23 chr5 39284647 39284819 -163800713 + C-rich Low_complexity Low_complexity 1 168 0 458 286 15 23 chr5 39285278 39285411 -163800121 + MER57-int LTR ERV1 5825 5956 -1581 1059 247 13 0 chr5 39285492 39285723 -163799809 + MER57-int LTR ERV1 5966 6199 -1338 747 154 0 0 chr5 39286283 39286393 -163799139 + FLAM_C SINE Alu 2 111 -32 212 59 29 0 chr5 39286399 39286433 -163799099 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 1876 115 51 90 chr5 39287273 39287456 -163798076 + THE1C LTR MaLR 1 163 -212 189 0 0 0 chr5 39287456 39287477 -163798055 + (TC)n Simple_repeat Simple_repeat 1 21 0 1876 115 51 90 chr5 39287477 39287683 -163797849 + THE1C LTR MaLR 163 375 0 925 275 21 74 chr5 39287896 39288031 -163797501 + MER57-int LTR ERV1 6794 6935 -602 2119 113 3 13 chr5 39288031 39288332 -163797200 + AluJb SINE Alu 1 298 -14 925 275 21 74 chr5 39288332 39288574 -163796958 + MER57-int LTR ERV1 6935 7151 -386 257 220 0 0 chr5 39288579 39288629 -163796903 + MER57A LTR ERV1 42 91 -312 2262 119 0 0 chr5 39288643 39288953 -163796579 - AluSx SINE Alu -2 310 1 1053 110 0 0 chr5 39288953 39289089 -163796443 - AluSq/x SINE Alu -177 136 1 26 0 0 0 chr5 39289160 39289186 -163796346 + AT_rich Low_complexity Low_complexity 1 26 0 286 250 145 40 chr5 39291122 39291246 -163794286 + MIR SINE MIR 114 250 -12 470 260 105 47 chr5 39291274 39291532 -163794000 - L2 LINE L2 0 3313 3041 488 281 51 39 chr5 39291644 39291900 -163793632 - L2 LINE L2 -454 2860 2602 1517 252 155 31 chr5 39291940 39292132 -163793400 - L1ME3A LINE L1 -3 6167 6000 2230 111 0 3 chr5 39292132 39292430 -163793102 - AluSg SINE Alu -13 297 1 1517 252 155 31 chr5 39292430 39292780 -163792752 - L1ME3A LINE L1 -170 6000 5558 668 152 9 0 chr5 39292780 39292885 -163792647 - Tigger7 DNA MER2_type 0 2487 2382 1199 216 5 0 chr5 39292898 39293106 -163792426 - Tigger7 DNA MER2_type -2257 230 22 2585 74 0 0 chr5 39293107 39293417 -163792115 + AluY SINE Alu 1 310 -1 1494 77 0 15 chr5 39293546 39293741 -163791791 - MER107 DNA MER1_type -1 196 5 342 224 46 40 chr5 39294441 39294593 -163790939 + (CAGAGA)n Simple_repeat Simple_repeat 2 154 0 1194 174 0 14 chr5 39294628 39294906 -163790626 + AluJo SINE Alu 1 310 0 335 325 6 6 chr5 39295335 39295414 -163790118 + GA-rich Low_complexity Low_complexity 2 80 -90 2119 132 7 0 chr5 39295414 39295717 -163789815 + AluSx SINE Alu 1 305 -7 335 325 6 6 chr5 39295717 39295806 -163789726 + GA-rich Low_complexity Low_complexity 79 170 0 1618 149 37 34 chr5 39296051 39296346 -163789186 - AluJo SINE Alu -12 300 5 484 295 55 32 chr5 39296463 39296664 -163788868 + MIR SINE MIR 17 211 -51 364 305 6 11 chr5 39297130 39297307 -163788225 + GA-rich Low_complexity Low_complexity 1 176 0 1262 105 0 6 chr5 39297355 39297527 -163788005 - AluSc SINE Alu -7 302 132 2376 102 0 7 chr5 39297529 39297833 -163787699 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 39297959 39297983 -163787549 + AT_rich Low_complexity Low_complexity 1 24 0 1410 146 0 9 chr5 39298124 39298343 -163787189 - AluSg/x SINE Alu -13 297 81 226 353 20 33 chr5 39298355 39298508 -163787024 - MER5A DNA MER1_type -5 184 34 305 238 12 0 chr5 39298525 39298605 -163786927 + L1ME4a LINE L1 5961 6041 -80 223 246 115 0 chr5 39299100 39299161 -163786371 + MIR SINE MIR 77 144 -118 183 80 0 0 chr5 39299437 39299462 -163786070 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 357 265 88 24 chr5 39300957 39301127 -163784405 - L2 LINE L2 -359 2955 2775 777 218 50 42 chr5 39301129 39301343 -163784189 + MIR SINE MIR 10 228 -34 407 97 0 86 chr5 39301343 39301388 -163784144 + L1PA11 LINE L1 6086 6121 -53 2571 71 3 3 chr5 39301388 39301698 -163783834 + AluSp SINE Alu 1 310 -3 407 97 0 86 chr5 39301698 39301745 -163783787 + L1PA11 LINE L1 6121 6170 -4 777 218 50 42 chr5 39301745 39301769 -163783763 + MIR SINE MIR 228 250 -12 815 165 0 0 chr5 39302630 39302763 -163782769 + FLAM_C SINE Alu 1 133 0 221 316 0 58 chr5 39302786 39302920 -163782612 + GA-rich Low_complexity Low_complexity 1 126 -53 1719 119 34 72 chr5 39302920 39303272 -163782260 + AluSx SINE Alu 1 341 0 221 316 0 58 chr5 39303272 39303324 -163782208 + GA-rich Low_complexity Low_complexity 126 179 0 510 163 0 0 chr5 39303459 39303539 -163781993 + AluJb SINE Alu 46 125 -187 2566 67 0 0 chr5 39303666 39303966 -163781566 + AluY SINE Alu 1 300 -11 2102 98 14 0 chr5 39304455 39304731 -163780801 + AluSx SINE Alu 1 280 -32 276 30 0 0 chr5 39304731 39304764 -163780768 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 2224 109 3 31 chr5 39304779 39305099 -163780433 + AluSx SINE Alu 2 312 0 361 177 89 0 chr5 39305114 39305193 -163780339 + FLAM_A SINE Alu 43 128 -5 1392 125 0 5 chr5 39305503 39305695 -163779837 - AluSx SINE Alu -121 191 1 1788 146 0 0 chr5 39305698 39305951 -163779581 - AluJo SINE Alu -10 302 50 2923 100 20 11 chr5 39305958 39306408 -163779124 - LTR15 LTR ERV1 -6 487 34 1254 134 0 6 chr5 39306565 39306744 -163778788 - AluSg/x SINE Alu -16 296 119 401 131 0 0 chr5 39306744 39306805 -163778727 + AluS SINE Alu 233 293 -7 297 290 85 54 chr5 39307336 39307539 -163777993 - MIR SINE MIR -18 244 32 2179 117 7 7 chr5 39307539 39307838 -163777694 - AluSx SINE Alu -13 299 1 297 290 85 54 chr5 39307838 39307858 -163777674 - MIR SINE MIR -230 32 14 1096 194 85 32 chr5 39308304 39308552 -163776980 - AluJo SINE Alu -15 297 37 419 287 93 16 chr5 39308560 39308818 -163776714 + L1ME LINE L1 5521 5798 -323 2428 65 0 0 chr5 39308869 39309160 -163776372 - AluY SINE Alu -20 291 1 591 312 43 4 chr5 39309160 39309394 -163776138 - LTR33 LTR ERVL -65 456 214 391 229 86 50 chr5 39309423 39309563 -163775969 - LTR33 LTR ERVL -376 145 1 1903 156 7 0 chr5 39309573 39309856 -163775676 + AluSg SINE Alu 15 299 -11 2862 157 5 74 chr5 39310065 39310327 -163775205 + L1PA16 LINE L1 5512 5791 -375 2109 135 0 13 chr5 39310327 39310639 -163774893 + AluSx SINE Alu 1 308 -4 2862 157 5 74 chr5 39310639 39310995 -163774537 + L1PA16 LINE L1 5791 6093 -73 972 194 83 12 chr5 39311103 39311345 -163774187 + MLT1D LTR MaLR 180 438 -67 273 98 0 0 chr5 39311352 39311393 -163774139 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 1591 189 0 14 chr5 39311403 39311678 -163773854 - AluJo SINE Alu -41 271 1 1183 189 9 0 chr5 39311679 39311896 -163773636 - MLT1D LTR MaLR -286 219 1 459 310 38 16 chr5 39311956 39312140 -163773392 - MIR SINE MIR -69 193 6 1354 173 46 25 chr5 39312175 39312310 -163773222 + AluJb SINE Alu 1 132 -180 1882 128 58 7 chr5 39312310 39312584 -163772948 + AluSx SINE Alu 1 288 -24 1354 173 46 25 chr5 39312584 39312732 -163772800 + AluJb SINE Alu 132 290 -22 655 175 0 16 chr5 39312763 39312889 -163772643 + FLAM_A SINE Alu 6 129 -13 692 120 32 8 chr5 39314954 39315079 -163770453 + L1MC2 LINE L1 6066 6193 -151 260 331 40 20 chr5 39315667 39315818 -163769714 - MIR SINE MIR 0 262 109 234 148 74 0 chr5 39316171 39316225 -163769307 - L1M4 LINE L1 -966 5180 5123 245 105 0 0 chr5 39316362 39316400 -163769132 + Alu SINE Alu 257 294 -8 31 44 0 0 chr5 39316412 39316457 -163769075 + AT_rich Low_complexity Low_complexity 1 45 0 752 220 70 15 chr5 39316700 39316900 -163768632 + MIR SINE MIR 28 238 -24 377 211 179 70 chr5 39316916 39316973 -163768559 - MIR SINE MIR -54 208 159 1921 153 10 0 chr5 39316973 39317268 -163768264 - AluJo SINE Alu -14 298 1 377 211 179 70 chr5 39317268 39317366 -163768166 - MIR SINE MIR -103 159 36 649 153 8 6 chr5 39318214 39318477 -163767055 + AluJ SINE Alu 1 312 0 2416 83 0 3 chr5 39318701 39319003 -163766529 - AluY SINE Alu -1 310 10 1592 162 23 50 chr5 39319021 39319324 -163766208 - AluJo SINE Alu -17 295 1 481 190 52 17 chr5 39319333 39319449 -163766083 - MIR SINE MIR -111 151 32 1657 142 10 52 chr5 39319478 39319654 -163765878 - AluJb SINE Alu -5 307 146 2229 115 0 29 chr5 39319654 39319967 -163765565 - AluSx SINE Alu -8 304 1 1657 142 10 52 chr5 39319967 39320079 -163765453 - AluJb SINE Alu -166 146 31 2291 108 0 37 chr5 39320348 39320672 -163764860 - AluSx SINE Alu 0 312 1 182 91 30 0 chr5 39321086 39321119 -163764413 + GA-rich Low_complexity Low_complexity 1 34 0 185 194 0 48 chr5 39321357 39321419 -163764113 + GA-rich Low_complexity Low_complexity 2 60 0 1614 140 0 0 chr5 39321450 39321678 -163763854 + AluJb SINE Alu 47 274 -38 211 120 20 40 chr5 39321683 39321733 -163763799 + GA-rich Low_complexity Low_complexity 3 51 0 606 194 31 0 chr5 39321739 39321868 -163763664 + FLAM_A SINE Alu 1 133 0 520 200 50 17 chr5 39321900 39322020 -163763512 - L2 LINE L2 -3 3310 3187 202 279 39 19 chr5 39322345 39322449 -163763083 + (CAGAGA)n Simple_repeat Simple_repeat 4 109 0 199 140 40 0 chr5 39322450 39322500 -163763032 + GA-rich Low_complexity Low_complexity 1 52 0 1912 167 0 3 chr5 39322534 39322828 -163762704 + AluJo SINE Alu 1 293 -19 605 238 97 7 chr5 39323117 39323312 -163762220 + MER57A LTR ERV1 206 403 0 2179 121 7 0 chr5 39324243 39324533 -163760999 + AluSx SINE Alu 1 292 -20 4306 179 32 53 chr5 39324717 39325693 -163759839 + LTR5 LTR ERVK 1 955 -14 428 246 98 16 chr5 39326927 39327049 -163758483 - MIR SINE MIR -50 212 81 311 183 56 56 chr5 39327059 39327130 -163758402 + MER33 DNA MER1_type 1 71 -253 1340 145 85 0 chr5 39327131 39327379 -163758153 + L1PB4 LINE L1 5710 5978 -178 869 257 8 13 chr5 39327373 39327610 -163757922 - L1M4 LINE L1 -2008 4138 3903 * 3245 99 15 27 chr5 39327612 39328664 -163756868 - MER11A LTR ERVK 0 1266 139 1155 20 0 20 chr5 39328981 39329128 -163756404 - L1PA5 LINE L1 -4 6150 6007 3837 36 2 0 chr5 39329128 39329601 -163755931 - L1PA5 LINE L1 -359 5795 5322 1276 38 0 0 chr5 39329601 39329761 -163755771 - L1PA4 LINE L1 -6 6149 5990 1300 38 0 0 chr5 39329761 39329921 -163755611 + L1PA4 LINE L1 5820 5979 -176 * 4477 77 15 3 chr5 39329911 39330573 -163754959 - L1PA5 LINE L1 -815 5331 4662 622 128 4 124 chr5 39330677 39330927 -163754605 + LTR15 LTR ERV1 222 441 -52 304 95 0 143 chr5 39331000 39331105 -163754427 + AluJo SINE Alu 50 139 -163 1197 141 0 35 chr5 39331317 39331515 -163754017 + AluSx SINE Alu 1 191 -121 920 74 99 0 chr5 39331737 39331858 -163753674 + AluSq/x SINE Alu 1 133 -180 1417 151 72 82 chr5 39331863 39331993 -163753539 + AluJo SINE Alu 1 131 -181 2086 121 3 13 chr5 39331993 39332291 -163753241 + AluSq SINE Alu 1 295 -18 1417 151 72 82 chr5 39332291 39332465 -163753067 + AluJo SINE Alu 131 302 -10 240 210 16 0 chr5 39332979 39333041 -163752491 + (CA)n Simple_repeat Simple_repeat 2 64 0 2273 98 7 3 chr5 39333049 39333344 -163752188 - AluSx SINE Alu -16 296 1 1643 159 32 45 chr5 39333790 39334099 -163751433 - AluJb SINE Alu -7 305 1 1611 228 110 35 chr5 39334136 39334400 -163751132 + L1M4 LINE L1 4385 4628 -1518 2258 115 0 0 chr5 39334400 39334696 -163750836 + AluSx SINE Alu 1 296 -16 1611 228 110 35 chr5 39334696 39335094 -163750438 + L1M4 LINE L1 4628 5097 -1049 573 195 17 17 chr5 39335254 39335428 -163750104 + CT-rich Low_complexity Low_complexity 3 176 0 207 0 0 0 chr5 39335433 39335456 -163750076 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 2211 128 0 3 chr5 39335464 39335762 -163749770 - AluJb SINE Alu -15 297 1 4708 145 23 23 chr5 39335780 39336676 -163748856 - L1MA3 LINE L1 -19 6286 5391 2333 146 65 2 chr5 39336676 39337079 -163748453 + MSTA LTR MaLR 1 428 0 2224 111 0 10 chr5 39337090 39337387 -163748145 - AluSx SINE Alu -13 299 6 303 75 0 0 chr5 39337388 39337428 -163748104 + MSTA LTR MaLR 388 427 -1 4038 175 13 13 chr5 39337429 39338298 -163747234 - L1MA3 LINE L1 -543 5801 5254 1864 156 0 0 chr5 39338298 39338573 -163746959 - AluSx SINE Alu -37 275 1 4038 175 13 13 chr5 39338573 39339334 -163746198 - L1MA3 LINE L1 -1090 5254 4495 1859 108 40 0 chr5 39339521 39339772 -163745760 - AluSc SINE Alu -48 261 1 841 128 0 8 chr5 39339772 39339889 -163745643 - AluSq/x SINE Alu -197 116 1 2499 74 3 0 chr5 39339899 39340195 -163745337 - AluSp SINE Alu -16 297 1 2491 71 10 0 chr5 39340195 39340492 -163745040 - AluSc SINE Alu -9 300 1 507 318 77 24 chr5 39340493 39341005 -163744527 - L2 LINE L2 -233 3080 2542 225 276 86 69 chr5 39341008 39341048 -163744484 + L2 LINE L2 2626 2664 -608 2433 62 0 23 chr5 39341048 39341353 -163744179 - AluY SINE Alu 0 311 14 2062 129 0 43 chr5 39341353 39341542 -163743990 - AluSx SINE Alu -1 311 140 2404 85 0 7 chr5 39341542 39341848 -163743684 - AluSc SINE Alu -5 304 1 2062 129 0 43 chr5 39341848 39341983 -163743549 - AluSx SINE Alu -172 140 1 225 276 86 69 chr5 39341983 39342323 -163743209 + L2 LINE L2 2663 3040 -232 1887 138 24 7 chr5 39342335 39342626 -163742906 - AluSx SINE Alu -16 296 1 517 194 78 8 chr5 39342749 39342878 -163742654 - L2 LINE L2 -719 2595 2458 489 257 49 7 chr5 39342929 39343073 -163742459 + MIR SINE MIR 113 262 0 775 138 32 186 chr5 39343347 39343463 -163742069 - L1MB5 LINE L1 -8 6166 6108 2289 114 13 0 chr5 39343463 39343770 -163741762 - AluSx SINE Alu -1 311 1 775 138 32 186 chr5 39343770 39343906 -163741626 - L1MB5 LINE L1 -66 6108 5953 2155 128 3 19 chr5 39343922 39344234 -163741298 - AluJb SINE Alu -5 307 1 185 35 69 0 chr5 39344234 39344263 -163741269 + T-rich Low_complexity Low_complexity 2 32 0 914 149 70 152 chr5 39344268 39344338 -163741194 - AluJo SINE Alu 0 302 228 2161 104 0 0 chr5 39344338 39344663 -163740869 + AluSg SINE Alu 2 326 0 914 149 70 152 chr5 39344663 39344760 -163740772 - AluJo SINE Alu -74 228 125 2214 97 10 19 chr5 39344760 39345069 -163740463 - AluSq SINE Alu -7 306 1 914 149 70 152 chr5 39345069 39345226 -163740306 - AluJo SINE Alu -177 125 1 378 238 69 0 chr5 39345237 39345338 -163740194 + MER112 DNA MER1_type 116 223 -37 394 167 15 0 chr5 39345348 39345414 -163740118 - MER5B DNA MER1_type -22 156 90 728 112 0 9 chr5 39345450 39345557 -163739975 - FLAM_C SINE Alu -25 118 13 2175 88 3 79 chr5 39345557 39345886 -163739646 + AluY SINE Alu 1 304 -7 232 203 40 40 chr5 39345886 39345960 -163739572 + MER5B DNA MER1_type 104 177 -1 360 0 0 0 chr5 39346062 39346102 -163739430 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2232 88 11 0 chr5 39346104 39346387 -163739145 - AluSg SINE Alu -24 286 1 252 0 0 0 chr5 39346388 39346416 -163739116 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2236 102 3 0 chr5 39346416 39346699 -163738833 - AluSp SINE Alu -29 284 1 1912 153 7 3 chr5 39346701 39346989 -163738543 - AluJb SINE Alu -19 293 5 2280 113 3 3 chr5 39347720 39348031 -163737501 - AluSp SINE Alu -2 311 1 1618 185 3 24 chr5 39348506 39348804 -163736728 + AluJo SINE Alu 1 292 -20 233 229 0 0 chr5 39349176 39349224 -163736308 - Alu SINE Alu -168 134 87 192 77 0 0 chr5 39349763 39349789 -163735743 + (CCCCG)n Simple_repeat Simple_repeat 1 26 0 226 191 44 0 chr5 39349846 39349914 -163735618 + (CGGGG)n Simple_repeat Simple_repeat 3 73 0 220 270 0 44 chr5 39349966 39350103 -163735429 + (CGGGG)n Simple_repeat Simple_repeat 1 131 0 * 267 283 11 28 chr5 39350024 39350204 -163735328 + G-rich Low_complexity Low_complexity 4 180 0 324 300 84 14 chr5 39351791 39351947 -163733585 + MIR SINE MIR 35 200 -62 240 319 8 35 chr5 39354535 39354712 -163730820 + CT-rich Low_complexity Low_complexity 1 172 0 591 15 0 0 chr5 39354718 39354786 -163730746 + (TC)n Simple_repeat Simple_repeat 1 68 0 592 97 0 6 chr5 39356944 39357184 -163728348 + AluSx SINE Alu 1 287 -22 707 175 0 16 chr5 39357215 39357341 -163728191 + FLAM_A SINE Alu 6 129 -13 681 113 40 8 chr5 39359406 39359530 -163726002 + L1MC2 LINE L1 6066 6193 -151 258 336 107 7 chr5 39360119 39360259 -163725273 - MIR SINE MIR 0 262 109 228 164 73 0 chr5 39360608 39360663 -163724869 - L1M4 LINE L1 -966 5180 5122 4108 160 24 19 chr5 39360931 39361759 -163723773 + L1MC2 LINE L1 4962 5795 -549 1977 140 3 10 chr5 39361759 39362073 -163723459 + AluSx SINE Alu 1 312 0 4108 160 24 19 chr5 39362073 39362280 -163723252 + L1MC2 LINE L1 5795 6000 -344 720 174 106 0 chr5 39362277 39362409 -163723123 - L1M1 LINE L1 -6007 1558 1413 * 4949 198 11 60 chr5 39362406 39362943 -163722589 + L1MA3 LINE L1 3840 4402 -1744 1233 156 0 19 chr5 39362943 39363154 -163722378 + AluJb SINE Alu 85 291 -21 4949 198 11 60 chr5 39363154 39364173 -163721359 + L1MA3 LINE L1 4402 5395 -751 299 75 0 0 chr5 39364174 39364214 -163721318 - MSTA LTR MaLR -1 427 388 2099 96 17 7 chr5 39364215 39364508 -163721024 + AluSx SINE Alu 6 301 -11 2635 140 54 2 chr5 39364519 39364926 -163720606 - MSTA LTR MaLR 0 428 1 4892 142 24 7 chr5 39364926 39365807 -163719725 + L1MA3 LINE L1 5391 6286 -19 2051 136 0 3 chr5 39365825 39366126 -163719406 + AluJb SINE Alu 1 300 -12 657 203 17 11 chr5 39366130 39366307 -163719225 + GA-rich Low_complexity Low_complexity 1 178 0 246 94 0 0 chr5 39366307 39366339 -163719193 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 804 92 64 21 chr5 39366640 39366781 -163718751 - AluSx SINE Alu -135 177 31 1384 115 0 5 chr5 39367002 39367194 -163718338 - AluSx SINE Alu -121 191 1 1639 150 0 4 chr5 39367197 39367450 -163718082 - AluJo SINE Alu -11 301 50 2871 109 20 11 chr5 39367457 39367907 -163717625 - LTR15 LTR ERV1 -6 487 34 1175 135 0 6 chr5 39368064 39368242 -163717290 - AluSg/x SINE Alu -17 295 119 450 147 0 0 chr5 39368242 39368317 -163717215 + AluS SINE Alu 232 306 -3 311 309 43 22 chr5 39368826 39368965 -163716567 - MIR SINE MIR -18 244 103 2190 105 7 3 chr5 39369024 39369329 -163716203 - AluSx SINE Alu -6 306 1 1083 169 83 51 chr5 39369800 39370054 -163715478 - AluJo SINE Alu -14 298 37 525 296 86 15 chr5 39370062 39370329 -163715203 + L1MC/D LINE L1 5521 5806 -2002 588 294 78 19 chr5 39370329 39370378 -163715154 - LTR33 LTR ERVL -8 513 468 2247 109 0 0 chr5 39370378 39370689 -163714843 - AluY SINE Alu 0 311 1 588 294 78 19 chr5 39370689 39370908 -163714624 - LTR33 LTR ERVL -53 468 229 566 361 9 37 chr5 39371058 39371355 -163714177 - ERVL LTR ERVL -4435 1329 1048 2099 141 0 0 chr5 39371355 39371667 -163713865 - AluSx SINE Alu 0 312 1 566 361 9 37 chr5 39371667 39371826 -163713706 - ERVL LTR ERVL -4716 1048 886 1880 126 25 0 chr5 39371842 39372145 -163713387 + AluSx SINE Alu 1 310 0 473 315 47 37 chr5 39372238 39372497 -163713035 - ERVL LTR ERVL -5089 675 411 1719 191 0 0 chr5 39372497 39372795 -163712737 + AluJo SINE Alu 1 298 -14 473 315 47 37 chr5 39372795 39372856 -163712676 - ERVL LTR ERVL -5353 411 352 243 88 0 0 chr5 39372890 39372924 -163712608 + (TTA)n Simple_repeat Simple_repeat 2 35 0 252 330 34 25 chr5 39372924 39373042 -163712490 - MIR SINE MIR -124 138 20 1822 225 19 65 chr5 39373446 39373921 -163711611 + MSTB2 LTR MaLR 5 457 0 1729 164 0 11 chr5 39373994 39374280 -163711252 + AluSx SINE Alu 3 285 -27 679 276 27 5 chr5 39374518 39374739 -163710793 + L1MC/D LINE L1 5575 5800 -2008 452 222 28 0 chr5 39374739 39374847 -163710685 - LTR33 LTR ERVL 0 521 411 1515 148 20 128 chr5 39374954 39375299 -163710233 + AluYb8 SINE Alu 1 308 0 2114 99 16 10 chr5 39375307 39375610 -163709922 + AluSq SINE Alu 1 305 -8 1750 151 0 7 chr5 39375733 39376039 -163709493 + AluSx SINE Alu 1 304 0 1202 199 57 37 chr5 39376051 39376348 -163709184 + AluJo SINE Alu 3 305 -7 792 138 231 0 chr5 39376369 39376529 -163709003 + MSTA LTR MaLR 1 197 -231 2135 113 3 0 chr5 39376530 39376821 -163708711 + AluSx SINE Alu 1 292 -20 1956 98 27 27 chr5 39377387 39377682 -163707850 + AluSq SINE Alu 1 295 -18 236 294 39 59 chr5 39377708 39377861 -163707671 + MIR SINE MIR 63 212 -50 2087 104 17 0 chr5 39378029 39378328 -163707204 + AluY SINE Alu 1 304 -7 220 288 12 25 chr5 39379107 39379187 -163706345 - MIR3 SINE MIR -6 202 124 * 368 313 187 11 chr5 39379184 39379366 -163706166 - MIR SINE MIR -3 259 46 351 289 84 14 chr5 39380487 39380643 -163704889 + MIR SINE MIR 35 200 -62 2024 18 4 0 chr5 39383592 39383821 -163701711 - SVA Other Other 0 1386 1157 388 252 85 78 chr5 39387325 39387565 -163697967 - MIR SINE MIR -29 233 1 226 363 11 0 chr5 39387781 39387872 -163697660 - MIR SINE MIR -61 147 56 351 268 290 0 chr5 39387958 39388096 -163697436 + MER5B DNA MER1_type 1 178 0 224 172 17 0 chr5 39388602 39388660 -163696872 + G-rich Low_complexity Low_complexity 5 63 0 1991 119 17 0 chr5 39390943 39391238 -163694294 + AluSx SINE Alu 1 300 -12 474 183 5 28 chr5 39393372 39393547 -163691985 + MSR1 Satellite Satellite 1 170 -6 1876 132 44 0 chr5 39394447 39394742 -163690790 - AluSq SINE Alu -5 308 1 440 262 273 4 chr5 39395456 39395712 -163689820 + L1M2 LINE L1 1734 4007 -2841 1248 153 5 0 chr5 39395819 39396047 -163689485 + AluSg/x SINE Alu 87 315 0 685 215 13 27 chr5 39396062 39396211 -163689321 + AluJo SINE Alu 9 155 -157 214 263 0 66 chr5 39397913 39397989 -163687543 - MIR SINE MIR -112 150 80 218 313 31 10 chr5 39398500 39398596 -163686936 + G-rich Low_complexity Low_complexity 4 101 0 379 290 54 21 chr5 39398704 39398890 -163686642 - MIR SINE MIR 0 262 71 4454 145 25 13 chr5 39399437 39400495 -163685037 + L1MC2 LINE L1 4962 6033 -311 2138 85 23 7 chr5 39400501 39400807 -163684725 - AluY SINE Alu 0 311 1 348 48 0 250 chr5 39400808 39400892 -163684640 + MLT1C LTR MaLR 403 465 -2 1368 211 64 43 chr5 39400894 39401093 -163684439 + L1MB8 LINE L1 5748 5941 -237 2101 119 0 0 chr5 39401093 39401388 -163684144 + AluSx SINE Alu 1 295 -17 1368 211 64 43 chr5 39401388 39401610 -163683922 + L1MB8 LINE L1 5941 6178 0 205 345 86 0 chr5 39401916 39402032 -163683500 + L2 LINE L2 3141 3266 -6 2022 106 7 0 chr5 39402067 39402351 -163683181 - AluSc SINE Alu -18 291 6 2049 116 3 7 chr5 39402469 39402772 -163682760 - AluSx SINE Alu -10 302 1 484 276 5 70 chr5 39403198 39403412 -163682120 + LTR16B LTR ERVL 256 455 -9 1854 112 32 11 chr5 39403439 39403738 -163681794 - AluSx SINE Alu 0 305 1 227 322 0 34 chr5 39404145 39404263 -163681269 + LTR67 LTR ERVL 434 547 -10 2131 115 0 3 chr5 39404263 39404568 -163680964 + AluSx SINE Alu 1 304 -8 941 251 125 49 chr5 39404647 39405100 -163680432 + L2 LINE L2 2450 2867 -446 1962 132 7 3 chr5 39405100 39405403 -163680129 - AluSx SINE Alu -8 304 1 941 251 125 49 chr5 39405403 39405734 -163679798 + L2 LINE L2 2867 3312 -1 1930 139 0 0 chr5 39405826 39406120 -163679412 + AluSx SINE Alu 1 294 -18 185 132 53 0 chr5 39406663 39406701 -163678831 + MIR SINE MIR 147 186 -76 198 313 0 36 chr5 39407048 39407131 -163678401 + MIR SINE MIR 107 186 -76 199 245 0 38 chr5 39407244 39407297 -163678235 - L2 LINE L2 -1 3312 3262 * 218 298 115 101 chr5 39407265 39407483 -163678049 - MIR SINE MIR -14 248 28 2094 119 0 0 chr5 39407496 39407799 -163677733 - AluSx SINE Alu -4 308 6 921 271 92 3 chr5 39407843 39408138 -163677394 + MER58B DNA MER1_type 1 321 -20 231 36 0 0 chr5 39408840 39408868 -163676664 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 1948 114 38 0 chr5 39408959 39409248 -163676284 - AluSg SINE Alu -10 300 1 389 280 46 46 chr5 39409524 39409690 -163675842 + MIR SINE MIR 88 256 -6 2099 135 0 0 chr5 39409690 39410002 -163675530 - AluSx SINE Alu 0 312 1 198 297 47 31 chr5 39410142 39410206 -163675326 + L3 LINE CR1 1400 1464 -113 1122 249 86 80 chr5 39410255 39410490 -163675042 + MLT1D LTR MaLR 5 237 -268 1878 134 17 0 chr5 39410490 39410789 -163674743 + AluSx SINE Alu 1 304 -8 1122 249 86 80 chr5 39410789 39411040 -163674492 + MLT1D LTR MaLR 237 494 -11 331 289 0 0 chr5 39411130 39411213 -163674319 + MIR SINE MIR 174 256 -6 2121 86 7 0 chr5 39411370 39411670 -163673862 + AluSq SINE Alu 1 302 0 297 0 0 0 chr5 39411902 39411935 -163673597 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 780 112 28 14 chr5 39412017 39412160 -163673372 + L1MB2 LINE L1 6019 6163 -8 845 204 6 0 chr5 39412322 39412494 -163673038 - FRAM SINE Alu -7 169 1 2297 60 0 3 chr5 39412502 39412784 -163672748 - AluY SINE Alu -14 297 17 255 331 29 0 chr5 39413380 39413555 -163671977 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 528 68 0 0 chr5 39413609 39413682 -163671850 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 2201 94 10 0 chr5 39413877 39414175 -163671357 + AluSp SINE Alu 3 303 -10 234 0 0 0 chr5 39414175 39414201 -163671331 + (TA)n Simple_repeat Simple_repeat 2 27 0 300 327 134 45 chr5 39414238 39414326 -163671206 + MIR SINE MIR 21 100 -162 2168 112 0 13 chr5 39414326 39414630 -163670902 - AluSq SINE Alu -13 300 1 300 327 134 45 chr5 39414630 39414743 -163670789 + MIR SINE MIR 100 240 -22 220 325 0 36 chr5 39415169 39415252 -163670280 + MIR3 SINE MIR 127 206 -2 314 274 123 9 chr5 39416058 39416164 -163669368 + MIR SINE MIR 29 146 -116 1828 134 19 29 chr5 39416174 39416487 -163669045 - AluSx SINE Alu -1 311 2 1462 123 13 0 chr5 39416583 39416811 -163668721 - L1MA6 LINE L1 -5 6295 6065 245 273 50 0 chr5 39417140 39417239 -163668293 - MER20B DNA MER1_type -31 752 649 2048 87 25 0 chr5 39417838 39417964 -163667568 + AluSq SINE Alu 1 122 -190 327 49 0 0 chr5 39417964 39418005 -163667527 + (CA)n Simple_repeat Simple_repeat 2 42 0 2048 87 25 0 chr5 39418005 39418183 -163667349 + AluSq SINE Alu 122 312 0 215 204 0 37 chr5 39418190 39418311 -163667221 + GA-rich Low_complexity Low_complexity 1 116 0 643 101 0 50 chr5 39418620 39418719 -163666813 - AluSg/x SINE Alu -18 291 198 663 203 10 58 chr5 39418727 39418763 -163666769 - L1 LINE L1 -3758 2624 2588 2095 78 27 17 chr5 39418763 39419057 -163666475 - AluSc SINE Alu -12 297 1 663 203 10 58 chr5 39419057 39419243 -163666289 - L1 LINE L1 -3794 2588 2410 1437 89 0 0 chr5 39419249 39419440 -163666092 + AluYa5 SINE Alu 110 300 -11 454 130 0 0 chr5 39419440 39419509 -163666023 + Alu SINE Alu 234 302 -10 199 236 173 39 chr5 39419636 39419763 -163665769 + L2 LINE L2 735 878 -2436 1967 95 27 27 chr5 39420055 39420351 -163665181 + AluSq SINE Alu 1 296 -17 257 288 39 59 chr5 39420377 39420530 -163665002 + MIR SINE MIR 63 212 -50 2077 102 16 0 chr5 39420698 39421001 -163664531 + AluY SINE Alu 1 308 -3 221 280 40 0 chr5 39421774 39421849 -163663683 - MIR3 SINE MIR -6 202 125 398 195 228 34 chr5 39472079 39472228 -163613304 + MIR SINE MIR 21 198 -64 406 123 0 0 chr5 39472231 39472288 -163613244 - LTR16C LTR ERVL -5 486 430 715 181 9 0 chr5 39472527 39472643 -163612889 - FLAM_A SINE Alu -16 117 1 1002 219 17 0 chr5 39472644 39472822 -163612710 + MER58A DNA MER1_type 42 222 -2 368 259 0 0 chr5 39472833 39472914 -163612618 - LTR16C LTR ERVL -219 272 192 2177 127 0 3 chr5 39472915 39473214 -163612318 + AluSx SINE Alu 1 298 -14 3641 113 43 0 chr5 39473264 39473770 -163611762 + MER1A DNA MER1_type 2 529 0 497 131 48 0 chr5 39473939 39474023 -163611509 - AluSc SINE Alu -8 301 214 2032 78 0 0 chr5 39474023 39474265 -163611267 - AluSc SINE Alu -50 259 18 285 213 7 68 chr5 39474272 39474375 -163611157 - MER5B DNA MER1_type -45 133 45 1744 174 17 26 chr5 39474660 39475010 -163610522 - L1MB5 LINE L1 -8 6166 5820 1272 174 146 0 chr5 39475139 39475290 -163610242 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 39475290 39475319 -163610213 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1272 174 146 0 chr5 39475319 39475414 -163610118 - AluJb SINE Alu -147 155 1 684 200 8 8 chr5 39475730 39475860 -163609672 - FLAM_A SINE Alu 0 133 4 480 62 0 0 chr5 39476856 39476920 -163608612 + (TG)n Simple_repeat Simple_repeat 2 65 0 1994 111 36 4 chr5 39477803 39478082 -163607450 - AluSq SINE Alu -24 289 2 529 205 96 24 chr5 39478188 39478354 -163607178 - MER5B DNA MER1_type 0 178 1 306 0 0 0 chr5 39478470 39478504 -163607028 + (TC)n Simple_repeat Simple_repeat 1 34 0 2530 107 6 8 chr5 39478778 39479134 -163606398 + THE1A LTR MaLR 1 355 0 11653 96 8 9 chr5 39479134 39480717 -163604815 + THE1A-int LTR MaLR 1 1580 0 2394 118 8 8 chr5 39480717 39481072 -163604460 + THE1A LTR MaLR 1 355 0 358 295 9 9 chr5 39481213 39481325 -163604207 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 39481510 39481551 -163603981 + (CCA)n Simple_repeat Simple_repeat 2 42 0 2195 114 3 3 chr5 39481810 39482117 -163603415 + THE1-int LTR MaLR 929 1235 -345 556 125 0 0 chr5 39482115 39482195 -163603337 - THE1-int LTR MaLR -572 1008 929 * 182 298 0 0 chr5 39482493 39482550 -163602982 - L2 LINE L2 -61 3252 3196 2165 126 0 0 chr5 39482639 39482932 -163602600 + AluSx SINE Alu 3 295 -17 217 314 141 13 chr5 39483510 39483666 -163601866 - MIR3 SINE MIR -5 203 28 1778 135 14 17 chr5 39483671 39483960 -163601572 - AluSx SINE Alu -24 288 1 395 283 139 0 chr5 39483986 39484152 -163601380 - MER5A DNA MER1_type 0 189 1 482 295 108 0 chr5 39484510 39484735 -163600797 - L2 LINE L2 -292 3021 2774 31 76 0 0 chr5 39484735 39484801 -163600731 + AT_rich Low_complexity Low_complexity 1 66 0 301 266 18 28 chr5 39485067 39485176 -163600356 + MIR3 SINE MIR 86 193 -15 1955 137 0 38 chr5 39485829 39486142 -163599390 - AluJb SINE Alu -9 303 3 287 122 0 0 chr5 39486281 39486322 -163599210 + MADE1 DNA Mariner 40 80 0 321 118 106 12 chr5 39486327 39486412 -163599120 + MIR SINE MIR 106 198 -64 2715 135 28 6 chr5 39487056 39487803 -163597729 + L1MA4A LINE L1 4900 5665 -638 6059 159 22 25 chr5 39487806 39487959 -163597573 + L1MA3 LINE L1 4126 4278 -1868 1868 137 3 56 chr5 39487959 39488281 -163597251 + AluSx SINE Alu 3 307 -5 6059 159 22 25 chr5 39488281 39489337 -163596195 + L1MA3 LINE L1 4278 5332 -814 755 154 8 0 chr5 39489345 39489462 -163596070 + FLAM_C SINE Alu 9 126 -17 6358 98 20 37 chr5 39489471 39490410 -163595122 + L1MA3 LINE L1 5321 6243 -62 1827 176 0 3 chr5 39490410 39490700 -163594832 + AluJb SINE Alu 1 289 -23 6358 98 20 37 chr5 39490700 39490762 -163594770 + L1MA3 LINE L1 6243 6305 0 1990 142 16 7 chr5 39490772 39491075 -163594457 + AluSx SINE Alu 1 306 -6 2984 130 50 75 chr5 39491075 39491383 -163594149 + L1MA4A LINE L1 5661 5975 -328 2348 108 3 0 chr5 39491383 39491689 -163593843 + AluSx SINE Alu 1 307 -5 2984 130 50 75 chr5 39491689 39492032 -163593500 + L1MA4A LINE L1 5975 6297 -6 348 215 113 44 chr5 39492099 39492251 -163593281 - MER5A DNA MER1_type -1 177 9 584 121 0 0 chr5 39492299 39492382 -163593150 + AluJ/FLAM SINE Alu 2 84 -228 553 133 163 0 chr5 39492524 39492622 -163592910 + FLAM_C SINE Alu 4 117 -16 14500 38 3 2 chr5 39492742 39495265 -163590267 + L1PA5 LINE L1 3623 6148 -6 1075 170 6 0 chr5 39495274 39495445 -163590087 + LTR8 LTR ERV1 511 682 -9 279 270 12 20 chr5 39495745 39495993 -163589539 + CT-rich Low_complexity Low_complexity 1 246 0 609 185 0 0 chr5 39495997 39496116 -163589416 + T-rich Low_complexity Low_complexity 1 119 0 883 30 59 44 chr5 39496130 39496265 -163589267 + L1PA5 LINE L1 6018 6154 0 1063 177 16 0 chr5 39496463 39496655 -163588877 + L1M4 LINE L1 5484 5678 -500 3429 94 55 6 chr5 39496656 39497143 -163588389 - MER9 LTR ERVK 0 511 1 11310 103 7 3 chr5 39497152 39499003 -163586529 - HERVK9 LTR ERVK 0 8032 4155 6732 86 3 0 chr5 39499005 39499878 -163585654 - HERVK9 LTR ERVK -2012 3904 3029 * 9328 77 7 0 chr5 39499863 39501051 -163584481 - HERVK9 LTR ERVK -3297 2619 1424 4066 92 10 23 chr5 39501049 39501624 -163583908 - HERVK9 LTR ERVK -5348 568 1 * 3041 123 69 6 chr5 39501624 39502105 -163583427 - MER9 LTR ERVK 0 511 1 2481 189 44 19 chr5 39502106 39502647 -163582885 + L1MB7 LINE L1 5614 6168 -16 1929 152 9 19 chr5 39502783 39503098 -163582434 - AluJb SINE Alu 0 312 1 930 157 18 97 chr5 39503098 39503315 -163582217 - MER20 DNA MER1_type -19 200 1 313 267 155 9 chr5 39503325 39503441 -163582091 + L2 LINE L2 3181 3313 0 2233 115 3 0 chr5 39503567 39503862 -163581670 + AluSx SINE Alu 1 296 -16 203 203 419 0 chr5 39504699 39504773 -163580759 - MIR SINE MIR -118 144 40 237 182 13 26 chr5 39505594 39505671 -163579861 + (TA)n Simple_repeat Simple_repeat 1 76 0 1064 244 168 12 chr5 39506489 39506907 -163578625 - LTR33 LTR ERVL -2 519 37 182 283 50 0 chr5 39507019 39507079 -163578453 + L3b LINE CR1 1431 1493 -90 2497 71 0 3 chr5 39507103 39507413 -163578119 - AluY SINE Alu -2 309 1 457 192 67 129 chr5 39508317 39508510 -163577022 + L1ME3A LINE L1 5988 6168 -2 2216 121 0 16 chr5 39509020 39509327 -163576205 + AluSx SINE Alu 1 302 -10 483 313 26 36 chr5 39509470 39509665 -163575867 - MIR3 SINE MIR -6 202 10 201 288 0 45 chr5 39509678 39509744 -163575788 + MIR SINE MIR 32 94 -168 277 302 78 9 chr5 39510185 39510301 -163575231 + MIR SINE MIR 130 253 -9 304 333 77 19 chr5 39510554 39510710 -163574822 + MIR SINE MIR 23 187 -75 2047 133 3 10 chr5 39510993 39511293 -163574239 + AluSx SINE Alu 1 298 -14 315 49 0 0 chr5 39511699 39511740 -163573792 + (CA)n Simple_repeat Simple_repeat 2 42 0 365 294 17 8 chr5 39511740 39511859 -163573673 - MER5B DNA MER1_type -52 126 7 741 256 128 55 chr5 39512157 39512555 -163572977 - MARNA DNA Mariner -84 502 76 2299 92 0 10 chr5 39512912 39513218 -163572314 - AluSx SINE Alu -9 303 1 432 228 189 43 chr5 39513226 39513507 -163572025 - L1ME4a LINE L1 0 6121 5800 498 17 0 0 chr5 39514361 39514420 -163571112 + (CA)n Simple_repeat Simple_repeat 2 60 0 2530 50 7 0 chr5 39514565 39514866 -163570666 - AluY SINE Alu -8 303 1 2204 84 21 0 chr5 39516341 39516627 -163568905 + AluSx SINE Alu 1 292 -20 1463 169 31 4 chr5 39516668 39516922 -163568610 + AluJo SINE Alu 1 261 -51 969 179 113 15 chr5 39516959 39517154 -163568378 + MER20 DNA MER1_type 1 214 -5 800 11 0 0 chr5 39517159 39517248 -163568284 + 5S rRNA rRNA 2 90 -31 414 293 35 88 chr5 39517445 39517728 -163567804 - L2 LINE L2 -13 3300 3033 1885 144 0 31 chr5 39518147 39518468 -163567064 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 39518553 39518583 -163566949 + AT_rich Low_complexity Low_complexity 1 30 0 2364 99 0 3 chr5 39520437 39520749 -163564783 + AluSx SINE Alu 1 311 -1 606 290 116 68 chr5 39520804 39521709 -163563823 - L2 LINE L2 -48 3224 2273 762 205 165 5 chr5 39521735 39521935 -163563597 + MIR SINE MIR 15 246 -16 362 291 107 53 chr5 39521975 39522488 -163563044 - L2 LINE L2 -1075 2239 1608 1877 166 94 0 chr5 39523623 39523930 -163561602 - MER1B DNA MER1_type -1 336 1 3666 95 36 16 chr5 39524015 39524519 -163561013 + MER75 DNA T2_type 1 514 0 237 224 15 15 chr5 39524536 39524603 -163560929 - Charlie7 DNA MER1_type -34 2578 2512 291 171 92 0 chr5 39524618 39524694 -163560838 - Charlie7 DNA MER1_type -2470 142 60 2318 72 7 0 chr5 39527264 39527555 -163557977 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 39529746 39529772 -163555760 + AT_rich Low_complexity Low_complexity 1 26 0 1969 102 0 42 chr5 39529843 39529979 -163555553 + AluSx SINE Alu 1 120 -192 2379 102 0 0 chr5 39529979 39530284 -163555248 + AluSc SINE Alu 1 305 -4 1969 102 0 42 chr5 39530284 39530431 -163555101 + AluSx SINE Alu 120 272 -40 1912 159 65 3 chr5 39530460 39530813 -163554719 + L1MA8 LINE L1 5917 6291 0 736 176 167 32 chr5 39530944 39531165 -163554367 + L1MD3 LINE L1 7745 7995 0 242 211 0 0 chr5 39531289 39531346 -163554186 - L1ME4a LINE L1 0 6121 6065 2217 94 13 23 chr5 39531866 39532173 -163553359 + AluY SINE Alu 1 304 -7 2289 235 58 20 chr5 39532176 39532842 -163552690 + L1ME1 LINE L1 5449 6299 -35 1069 218 77 2 chr5 39533914 39534264 -163551268 + Charlie4a DNA MER1_type 34 473 -35 890 136 0 0 chr5 39534630 39534780 -163550752 - FLAM_C SINE Alu 0 150 1 1512 132 25 107 chr5 39535175 39535494 -163550038 + AluYb8 SINE Alu 1 293 -25 364 361 56 25 chr5 39535944 39536268 -163549264 - L2 LINE L2 -457 2857 2524 50 92 0 0 chr5 39536957 39537098 -163548434 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 39537108 39537152 -163548380 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 39537549 39537799 -163547733 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 39538351 39538416 -163547116 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 39539539 39539849 -163545683 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 39539885 39540158 -163545374 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 39541801 39542290 -163543242 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 39542635 39542871 -163542661 - L2 LINE L2 -11 3261 2993 744 319 79 22 chr5 39543010 39543417 -163542115 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 39543807 39543987 -163541545 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 39543976 39544029 -163541503 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 39544030 39544065 -163541467 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 39544077 39544330 -163541202 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 39544875 39545155 -163540377 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 39548473 39548692 -163536840 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 39549424 39549775 -163535757 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 39549897 39550382 -163535150 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 39550466 39550554 -163534978 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 39550630 39550952 -163534580 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 39550959 39551267 -163534265 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 39551290 39551418 -163534114 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 39551452 39551622 -163533910 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 39552123 39552420 -163533112 + AluSx SINE Alu 1 298 -14 2092 81 56 0 chr5 39554777 39555062 -163530470 - AluSx SINE Alu -8 304 4 1354 114 30 5 chr5 39555713 39555938 -163529594 + AluSg/x SINE Alu 77 306 0 22 35 0 0 chr5 39556042 39556071 -163529461 + AT_rich Low_complexity Low_complexity 1 29 0 891 237 76 0 chr5 39556171 39556382 -163529150 - MIR SINE MIR -8 254 28 1998 151 10 0 chr5 39556383 39556687 -163528845 - AluJb SINE Alu -3 309 3 1162 183 28 0 chr5 39556718 39556931 -163528601 - MER20 DNA MER1_type 0 219 1 1164 167 139 0 chr5 39556939 39557220 -163528312 - MER33 DNA MER1_type 0 324 5 2155 178 23 16 chr5 39557291 39557719 -163527813 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 39557719 39557980 -163527552 - AluSx SINE Alu -33 279 1 284 154 39 0 chr5 39558550 39558602 -163526930 - MER66B LTR ERV1 -141 345 292 206 231 154 77 chr5 39558689 39558832 -163526700 - L2 LINE L2 0 3313 3160 244 265 48 24 chr5 39558931 39559014 -163526518 - L2 LINE L2 -220 3052 2968 293 111 0 0 chr5 39559270 39559315 -163526217 - LTR12 LTR ERV1 -318 396 352 198 325 38 12 chr5 39559881 39559961 -163525571 - MIR3 SINE MIR -15 193 112 478 291 133 24 chr5 39559973 39560199 -163525333 - MIR SINE MIR -2 260 12 1468 197 48 7 chr5 39560787 39561076 -163524456 + AluJb SINE Alu 1 301 -11 2377 83 0 7 chr5 39561150 39561450 -163524082 + AluSx SINE Alu 1 298 -14 450 187 0 0 chr5 39561450 39561541 -163523991 + (TA)n Simple_repeat Simple_repeat 1 91 0 420 20 0 0 chr5 39561532 39561581 -163523951 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 438 135 0 0 chr5 39562282 39562356 -163523176 + L1MA10 LINE L1 6254 6327 -7 268 321 71 65 chr5 39562904 39563072 -163522460 - MIR SINE MIR -79 183 15 1022 274 87 27 chr5 39563249 39563811 -163521721 - L2 LINE L2 -4 3309 2698 1433 233 40 44 chr5 39563815 39564411 -163521121 + L1MC5 LINE L1 6923 7516 -445 395 209 73 37 chr5 39564470 39564661 -163520871 + L1MC5 LINE L1 7644 7841 -120 526 290 59 21 chr5 39564729 39564967 -163520565 - L2 LINE L2 -611 2703 2457 407 213 197 16 chr5 39565363 39565490 -163520042 - MIR SINE MIR 0 262 113 281 313 155 53 chr5 39566647 39566912 -163518620 - L2 LINE L2 0 3272 2981 860 154 0 0 chr5 39566929 39567059 -163518473 - FLAM_C SINE Alu -3 130 1 2434 124 8 3 chr5 39567616 39567978 -163517554 - THE1B LTR MaLR 0 364 1 2140 108 4 0 chr5 39568123 39568401 -163517131 + AluSx SINE Alu 1 279 -33 864 258 188 12 chr5 39570289 39570773 -163514759 + L1MC4a LINE L1 5598 6166 -1642 1403 113 16 61 chr5 39570988 39571235 -163514297 + MER46A DNA MER2_type 1 236 0 529 302 86 33 chr5 39572436 39572681 -163512851 - MIR SINE MIR 0 262 5 330 206 82 10 chr5 39573458 39573555 -163511977 - Charlie7 DNA MER1_type -2504 108 5 944 196 186 53 chr5 39574223 39574545 -163510987 + MLT1A1 LTR MaLR 1 365 0 2520 70 0 13 chr5 39574587 39574926 -163510606 - AluY SINE Alu 0 337 3 337 308 99 29 chr5 39575222 39575394 -163510138 + MER5A DNA MER1_type 4 187 -2 2233 101 7 0 chr5 39575760 39576047 -163509485 - AluSc SINE Alu -20 289 1 487 266 6 57 chr5 39577402 39577560 -163507972 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 39578151 39578173 -163507359 + (TGG)n Simple_repeat Simple_repeat 2 23 0 646 234 63 0 chr5 39578215 39578373 -163507159 - MER5B DNA MER1_type -10 168 1 486 251 64 61 chr5 39579485 39579665 -163505867 - MIR SINE MIR -48 214 31 186 313 31 0 chr5 39580324 39580388 -163505144 - L2 LINE L2 -1 3312 3247 338 241 13 13 chr5 39580403 39580482 -163505050 - MIR SINE MIR -28 234 156 619 212 130 7 chr5 39580482 39580628 -163504904 - FRAM SINE Alu -13 163 1 238 281 73 10 chr5 39580933 39581029 -163504503 - L1ME4a LINE L1 -30 6091 5990 283 267 96 14 chr5 39581069 39581215 -163504317 - L1ME4a LINE L1 -205 5916 5759 739 246 31 36 chr5 39582824 39583019 -163502513 - MIR SINE MIR -61 201 8 429 239 0 72 chr5 39583196 39583334 -163502198 - MIR SINE MIR -1 261 134 622 231 82 14 chr5 39583425 39583635 -163501897 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 39584894 39584950 -163500582 + AT_rich Low_complexity Low_complexity 1 56 0 4012 206 83 66 chr5 39585193 39586752 -163498780 + L1MC/D LINE L1 3444 5028 -1118 1300 200 4 39 chr5 39586816 39587071 -163498461 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 39587303 39587330 -163498202 + AT_rich Low_complexity Low_complexity 1 27 0 329 252 122 23 chr5 39587415 39587546 -163497986 + L1MC/D LINE L1 5673 5816 -1992 2352 104 0 0 chr5 39587558 39587865 -163497667 + AluSx SINE Alu 1 307 -5 228 242 33 22 chr5 39588609 39588700 -163496832 + L1M4 LINE L1 784 875 -5667 979 174 101 9 chr5 39588764 39588982 -163496550 + L1MCa LINE L1 19 256 -6170 695 156 78 0 chr5 39588984 39589151 -163496381 + L1MCa LINE L1 1800 1979 -4447 7486 196 55 72 chr5 39589153 39589354 -163496178 + L1MCa LINE L1 2092 2295 -4131 960 206 0 0 chr5 39589354 39589519 -163496013 + FRAM SINE Alu 1 165 -1 7486 196 55 72 chr5 39589519 39590051 -163495481 + L1MCa LINE L1 2295 2834 -3592 3127 79 56 7 chr5 39590051 39590483 -163495049 - MLT2A2 LTR ERVL 0 453 1 7486 196 55 72 chr5 39590483 39591566 -163493966 + L1MCa LINE L1 2834 3933 -2493 1551 72 5 0 chr5 39591566 39591773 -163493759 + L1PA7 LINE L1 5943 6150 -4 7486 196 55 72 chr5 39591773 39592186 -163493346 + L1MCa LINE L1 3933 4351 -2075 2418 109 0 0 chr5 39592186 39592499 -163493033 - AluSq SINE Alu 0 313 1 7486 196 55 72 chr5 39592499 39592995 -163492537 + L1MCa LINE L1 4351 4764 -1662 758 189 8 0 chr5 39592995 39593122 -163492410 + FLAM_A SINE Alu 1 128 -5 7486 196 55 72 chr5 39593122 39593408 -163492124 + L1MCa LINE L1 4764 5053 -1373 3685 152 33 9 chr5 39593408 39594097 -163491435 + L1PB4 LINE L1 5437 6142 -14 2241 66 0 24 chr5 39594492 39594781 -163490751 + AluSc SINE Alu 1 282 -27 1377 158 68 43 chr5 39595172 39595451 -163490081 + AluJo SINE Alu 1 286 -26 2198 102 14 0 chr5 39596111 39596404 -163489128 + AluSx SINE Alu 1 297 -15 197 291 152 0 chr5 39597171 39597250 -163488282 + L2 LINE L2 3221 3311 -2 1965 172 0 0 chr5 39597335 39597637 -163487895 - AluJo SINE Alu -10 302 1 2268 103 0 13 chr5 39597737 39598047 -163487485 + AluSx SINE Alu 1 306 -6 2303 105 0 0 chr5 39599385 39599680 -163485852 - AluSc SINE Alu -14 295 1 846 136 0 0 chr5 39600075 39600225 -163485307 + FLAM_C SINE Alu 1 150 0 942 218 77 2 chr5 39600591 39600941 -163484591 - Charlie4a DNA MER1_type -35 473 34 313 304 24 8 chr5 39602012 39602033 -163483499 - L1MA10 LINE L1 -35 6299 6279 2011 229 62 23 chr5 39602033 39602678 -163482854 - L1ME1 LINE L1 -48 6118 5449 937 131 38 12 chr5 39602681 39602841 -163482691 - AluSq SINE Alu -5 308 145 441 0 0 0 chr5 39603034 39603083 -163482449 + (CA)n Simple_repeat Simple_repeat 2 50 0 2275 106 0 13 chr5 39603702 39604014 -163481518 + AluSc SINE Alu 1 308 -1 2214 93 14 0 chr5 39604632 39604921 -163480611 - AluSx SINE Alu -15 297 5 1986 101 49 3 chr5 39605754 39606040 -163479492 - AluSq SINE Alu -14 299 1 546 237 34 8 chr5 39606349 39606467 -163479065 + L2 LINE L2 3188 3308 -5 369 0 0 0 chr5 39606605 39606646 -163478886 + (CA)n Simple_repeat Simple_repeat 2 42 0 1876 151 16 16 chr5 39606743 39607055 -163478477 + AluJb SINE Alu 1 312 0 5478 162 46 18 chr5 39607509 39608504 -163477028 + L1 LINE L1 3239 4274 -1872 306 50 0 0 chr5 39608504 39608544 -163476988 + (CA)n Simple_repeat Simple_repeat 1 40 0 5478 162 46 18 chr5 39608544 39608744 -163476788 + L1 LINE L1 4274 4467 -1679 901 218 76 111 chr5 39609151 39609444 -163476088 + L1MC4 LINE L1 7537 7806 -236 1484 189 63 14 chr5 39609444 39609567 -163475965 + AluJb SINE Alu 1 117 -195 189 0 0 0 chr5 39609567 39609588 -163475944 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1484 189 63 14 chr5 39609588 39609750 -163475782 + AluJb SINE Alu 117 300 -12 901 218 76 111 chr5 39609750 39609980 -163475552 + L1MC4 LINE L1 7806 8042 0 639 290 11 11 chr5 39609993 39610176 -163475356 + MIR SINE MIR 20 202 -60 207 0 0 0 chr5 39610350 39610373 -163475159 + (A)n Simple_repeat Simple_repeat 1 23 0 222 118 0 0 chr5 39610598 39610632 -163474900 + (TATG)n Simple_repeat Simple_repeat 2 35 0 352 374 8 0 chr5 39611527 39611650 -163473882 + MER5A DNA MER1_type 63 186 -3 1376 162 4 4 chr5 39611958 39612193 -163473339 + MLT1A1 LTR MaLR 12 246 -119 245 337 63 44 chr5 39613720 39613817 -163471715 - MIR SINE MIR -2 260 166 2158 80 0 0 chr5 39613817 39614091 -163471441 - AluSc SINE Alu -1 308 35 245 337 63 44 chr5 39614091 39614151 -163471381 - MIR SINE MIR -96 166 109 2200 123 10 0 chr5 39614151 39614453 -163471079 + AluJb SINE Alu 1 305 -7 245 337 63 44 chr5 39614453 39614546 -163470986 - MIR SINE MIR -153 109 4 317 325 88 9 chr5 39614613 39614727 -163470805 - MIR SINE MIR -118 144 22 542 232 69 73 chr5 39614749 39614768 -163470764 + MIR SINE MIR 22 40 -222 553 219 50 8 chr5 39614768 39614887 -163470645 - FLAM_A SINE Alu -8 125 2 542 232 69 73 chr5 39614887 39615100 -163470432 + MIR SINE MIR 40 253 -9 734 274 51 8 chr5 39615221 39615455 -163470077 + MIR SINE MIR 12 255 -7 856 339 78 42 chr5 39616669 39617415 -163468117 - L2 LINE L2 -263 3009 2243 197 254 16 16 chr5 39617631 39617694 -163467838 + MIR SINE MIR 199 261 -1 606 301 79 94 chr5 39617843 39618437 -163467095 + L1MC4a LINE L1 5326 5910 -1898 969 175 88 28 chr5 39618631 39618848 -163466684 + MIR SINE MIR 12 241 -21 423 141 0 0 chr5 39618855 39618933 -163466599 + (ATG)n Simple_repeat Simple_repeat 2 79 0 397 229 0 76 chr5 39619052 39619157 -163466375 - L3 LINE CR1 -100 1477 1381 753 260 85 30 chr5 39619162 39619397 -163466135 + MIR SINE MIR 12 259 -3 254 240 190 20 chr5 39620395 39620495 -163465037 + MIR SINE MIR 19 135 -73 731 316 76 40 chr5 39620497 39620867 -163464665 - L2 LINE L2 0 3272 2890 307 183 0 0 chr5 39621020 39621080 -163464452 + MER103 DNA DNA 33 92 -74 2005 123 17 3 chr5 39621089 39621389 -163464143 + AluSx SINE Alu 1 304 -8 886 122 0 36 chr5 39621470 39621609 -163463923 - AluJo SINE Alu -178 134 1 806 195 130 35 chr5 39621931 39622162 -163463370 + MIR SINE MIR 10 262 0 2000 117 7 11 chr5 39623594 39623906 -163461626 + AluSc SINE Alu 1 311 0 1409 145 4 8 chr5 39624097 39624338 -163461194 - Tigger2 DNA MER2_type 0 2718 2479 943 166 11 11 chr5 39624339 39624514 -163461018 + AluJb SINE Alu 137 311 -1 3951 147 48 8 chr5 39624585 39625301 -163460231 - Tigger2 DNA MER2_type -1974 744 1 217 268 197 39 chr5 39625436 39625466 -163460066 - MIR3 SINE MIR -58 150 126 2405 96 3 0 chr5 39625466 39625778 -163459754 + AluSp SINE Alu 1 313 0 217 268 197 39 chr5 39625778 39625874 -163459658 - MIR3 SINE MIR -82 126 4 1967 116 32 3 chr5 39626127 39626411 -163459121 + AluSq SINE Alu 1 292 -21 1940 116 16 3 chr5 39627309 39627612 -163457920 - L1MC1 LINE L1 -18 6315 6009 1725 148 30 39 chr5 39627950 39628255 -163457277 - AluJo SINE Alu -10 302 1 2333 102 0 0 chr5 39628299 39628594 -163456938 + AluSc SINE Alu 1 295 -14 2268 103 0 13 chr5 39629932 39630242 -163455290 - AluSx SINE Alu -6 306 1 1965 172 0 0 chr5 39630342 39630644 -163454888 + AluJo SINE Alu 1 302 -10 197 291 152 0 chr5 39630729 39630808 -163454724 - L2 LINE L2 -2 3311 3221 231 254 40 79 chr5 39631274 39631400 -163454132 + MER20 DNA MER1_type 80 200 -19 22 0 0 0 chr5 39631508 39631530 -163454002 + AT_rich Low_complexity Low_complexity 1 22 0 525 160 319 14 chr5 39631890 39632034 -163453498 - MER5A DNA MER1_type 0 189 2 2345 78 24 3 chr5 39632157 39632453 -163453079 - AluSp SINE Alu -11 302 1 313 324 199 12 chr5 39633919 39634246 -163451286 + L2 LINE L2 2061 2448 -866 2281 119 0 0 chr5 39634404 39634707 -163450825 - AluSx SINE Alu -3 309 7 231 333 0 13 chr5 39635066 39635141 -163450391 + L2 LINE L2 3238 3311 -2 260 383 62 8 chr5 39635300 39635428 -163450104 + MIR3 SINE MIR 38 172 -36 24 0 0 0 chr5 39636665 39636689 -163448843 + AT_rich Low_complexity Low_complexity 1 24 0 2203 104 0 3 chr5 39636705 39636992 -163448540 + AluSq SINE Alu 3 288 -25 283 269 64 39 chr5 39637057 39637135 -163448397 + MIR SINE MIR 24 103 -105 577 172 0 78 chr5 39637878 39638006 -163447526 - FLAM_A SINE Alu -11 122 5 808 258 60 20 chr5 39638189 39638441 -163447091 + MIR SINE MIR 1 262 0 22 35 0 0 chr5 39638535 39638564 -163446968 + AT_rich Low_complexity Low_complexity 1 29 0 242 285 108 39 chr5 39639017 39639147 -163446385 + MIR SINE MIR 14 152 -110 253 357 24 12 chr5 39640644 39640728 -163444804 + L2 LINE L2 3170 3254 -18 2252 81 0 26 chr5 39641337 39641644 -163443888 + AluSg SINE Alu 1 299 -11 1377 158 68 43 chr5 39642015 39642294 -163443238 + AluJo SINE Alu 1 286 -26 1903 121 3 75 chr5 39642954 39643286 -163442246 + AluJb SINE Alu 1 308 -4 330 113 0 70 chr5 39643371 39643442 -163442090 - L1PA16 LINE L1 0 6166 6101 227 304 112 16 chr5 39644044 39644169 -163441363 + L2 LINE L2 3158 3294 -19 383 280 231 54 chr5 39644455 39644805 -163440727 - L2 LINE L2 -13 3300 2889 1528 167 95 8 chr5 39644862 39645126 -163440406 - AluSx SINE Alu -25 287 1 2237 99 3 7 chr5 39645609 39645913 -163439619 + AluSp SINE Alu 1 303 -10 2195 102 6 16 chr5 39647249 39647563 -163437969 - AluSq SINE Alu -2 311 1 569 218 24 8 chr5 39647566 39647690 -163437842 - FLAM_A SINE Alu -6 127 2 2406 81 7 0 chr5 39650012 39650320 -163435212 - AluSp SINE Alu -3 310 1 1814 139 21 3 chr5 39651748 39652036 -163433496 - AluJo SINE Alu -19 293 1 271 313 48 62 chr5 39652989 39653135 -163432397 + MIR SINE MIR 8 149 -59 419 294 142 74 chr5 39653172 39653639 -163431893 + L1M2 LINE L1 496 930 -5919 222 37 0 0 chr5 39653639 39653666 -163431866 + (CCG)n Simple_repeat Simple_repeat 1 27 0 419 294 142 74 chr5 39653666 39653971 -163431561 + L1M2 LINE L1 930 1407 -5442 2401 74 0 7 chr5 39656124 39656422 -163429110 + AluSc SINE Alu 1 296 -13 959 212 132 99 chr5 39656471 39656995 -163428537 - MLT1F LTR MaLR 0 542 2 211 53 26 26 chr5 39657251 39657289 -163428243 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 1786 130 0 27 chr5 39657302 39657564 -163427968 - AluSx SINE Alu -57 255 1 2097 141 0 7 chr5 39658210 39658516 -163427016 - AluSx SINE Alu -8 304 1 425 351 48 19 chr5 39659072 39659280 -163426252 + MIR SINE MIR 2 215 -47 1699 161 45 3 chr5 39660308 39660594 -163424938 - AluJo SINE Alu -14 298 1 2294 114 0 0 chr5 39660725 39661031 -163424501 - AluSq SINE Alu -2 311 6 1979 122 11 11 chr5 39661796 39662083 -163423449 - AluSx SINE Alu -25 287 1 584 248 224 14 chr5 39662174 39662388 -163423144 - MIR SINE MIR -2 260 2 24 0 0 0 chr5 39662996 39663020 -163422512 + AT_rich Low_complexity Low_complexity 1 24 0 337 198 99 0 chr5 39663021 39663122 -163422410 - Charlie8 DNA MER1_type -2251 166 56 2763 13 0 0 chr5 39663247 39663550 -163421982 - AluYb8 SINE Alu -15 303 1 198 0 0 0 chr5 39665178 39665200 -163420332 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 1453 193 0 82 chr5 39665200 39665506 -163420026 - AluJb SINE Alu -29 283 3 2396 106 0 0 chr5 39665541 39665852 -163419680 - AluSx SINE Alu -1 311 1 1711 252 113 65 chr5 39666551 39666773 -163418759 - L1MC4 LINE L1 0 8042 7832 2447 81 3 0 chr5 39666773 39667070 -163418462 + AluSp SINE Alu 2 299 -14 1711 252 113 65 chr5 39667070 39667960 -163417572 - L1MC4 LINE L1 -210 7832 6876 2113 131 0 0 chr5 39669073 39669363 -163416169 - AluSx SINE Alu -22 290 1 880 244 105 54 chr5 39671402 39672025 -163413507 - L1M4 LINE L1 -970 5176 4522 2539 245 107 36 chr5 39672041 39672570 -163412962 + L1MC4 LINE L1 6448 6938 -1104 2298 90 7 0 chr5 39672570 39672860 -163412672 + AluSg SINE Alu 1 292 -18 2539 245 107 36 chr5 39672860 39673647 -163411885 + L1MC4 LINE L1 6938 7949 -93 204 293 0 0 chr5 39674432 39674490 -163411042 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 260 262 144 10 chr5 39675272 39675373 -163410159 - MIR SINE MIR -61 147 39 2075 114 10 3 chr5 39675511 39675809 -163409723 - AluSg SINE Alu -10 300 1 273 260 125 21 chr5 39675877 39675973 -163409559 - MIR3 SINE MIR -48 160 55 243 0 0 0 chr5 39676109 39676136 -163409396 + (TG)n Simple_repeat Simple_repeat 2 28 0 2269 100 0 3 chr5 39676854 39677144 -163408388 + AluSg SINE Alu 1 289 -21 1898 149 10 7 chr5 39677251 39677547 -163407985 - AluSx SINE Alu -14 298 2 24 0 0 0 chr5 39679162 39679186 -163406346 + AT_rich Low_complexity Low_complexity 1 24 0 2829 10 0 0 chr5 39679757 39680065 -163405467 + AluYa5 SINE Alu 1 308 -3 269 339 72 33 chr5 39681934 39682114 -163403418 - MIR3 SINE MIR -6 202 16 477 267 54 70 chr5 39682121 39682379 -163403153 + L1ME3A LINE L1 4644 4897 -1249 317 266 161 12 chr5 39682408 39682656 -163402876 + L1ME3A LINE L1 4993 5277 -869 1241 133 258 24 chr5 39682709 39683046 -163402486 - Charlie1 DNA MER1_type 0 2761 2346 324 164 60 0 chr5 39683044 39683111 -163402421 - Charlie1 DNA MER1_type -2690 71 1 * 265 273 188 0 chr5 39683229 39683394 -163402138 + L1ME3A LINE L1 5461 5656 -506 345 252 107 0 chr5 39683400 39683503 -163402029 + MER5A DNA MER1_type 7 120 -69 419 259 97 16 chr5 39683550 39683796 -163401736 + L1ME3A LINE L1 5653 5925 -237 22 0 0 0 chr5 39683928 39683950 -163401582 + AT_rich Low_complexity Low_complexity 1 22 0 772 251 236 10 chr5 39684156 39684571 -163400961 + MLT1J LTR MaLR 3 511 0 362 292 167 12 chr5 39684659 39684827 -163400705 + MIR SINE MIR 54 247 -15 1731 135 53 11 chr5 39684959 39685241 -163400291 - AluSx SINE Alu -18 294 1 301 304 65 14 chr5 39685663 39685801 -163399731 + L3 LINE CR1 1355 1499 -78 1990 141 10 16 chr5 39685900 39686204 -163399328 - AluSx SINE Alu -10 302 1 8232 195 36 64 chr5 39686204 39686500 -163399032 - L1 LINE L1 -3104 3744 3441 7385 135 24 18 chr5 39686500 39686582 -163398950 - HSMAR2 DNA Mariner -2 1300 1220 1946 119 32 0 chr5 39686582 39686867 -163398665 + AluSx SINE Alu 1 294 -18 7385 135 24 18 chr5 39686867 39688076 -163397456 - HSMAR2 DNA Mariner -82 1220 1 8232 195 36 64 chr5 39688076 39688223 -163397309 - L1 LINE L1 -3407 3441 3291 1842 183 10 0 chr5 39688223 39688529 -163397003 - AluJo SINE Alu -3 309 1 8232 195 36 64 chr5 39688529 39688858 -163396674 - L1 LINE L1 -3557 3291 2954 1785 199 0 0 chr5 39688858 39689155 -163396377 - AluJo SINE Alu -15 297 1 8232 195 36 64 chr5 39689155 39689295 -163396237 - L1 LINE L1 -3894 2954 2811 219 69 0 0 chr5 39689295 39689324 -163396208 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1980 155 0 0 chr5 39689324 39689615 -163395917 - AluSx SINE Alu -21 291 1 8232 195 36 64 chr5 39689615 39691349 -163394183 - L1 LINE L1 -4036 2812 1187 3909 128 12 94 chr5 39691349 39691910 -163393622 + LTR8 LTR ERV1 1 486 -205 2471 70 0 10 chr5 39691910 39692223 -163393309 + AluY SINE Alu 2 311 0 3909 128 12 94 chr5 39692223 39692414 -163393118 + LTR8 LTR ERV1 486 691 0 8232 195 36 64 chr5 39692414 39692738 -163392794 - L1 LINE L1 -5661 1187 855 410 230 23 0 chr5 39693184 39693271 -163392261 - MER115 DNA AcHobo -447 246 158 2325 201 29 10 chr5 39693342 39693859 -163391673 - MER34 LTR ERV1 -4 538 12 216 158 0 0 chr5 39694635 39694673 -163390859 + GA-rich Low_complexity Low_complexity 2 39 0 281 287 70 23 chr5 39694792 39694921 -163390611 - MLT1L LTR MaLR -434 181 47 584 223 27 80 chr5 39695386 39695495 -163390037 + MER45A DNA AcHobo 1 97 -1484 4468 36 0 0 chr5 39695495 39696027 -163389505 - L1PA5 LINE L1 -2 6152 5621 584 223 27 80 chr5 39696027 39696105 -163389427 + MER45A DNA AcHobo 97 178 0 2767 64 0 43 chr5 39696242 39696433 -163389099 - L1PB1 LINE L1 0 6151 5984 2245 123 0 0 chr5 39696433 39696734 -163388798 - AluSx SINE Alu -11 301 1 2767 64 0 43 chr5 39696734 39696935 -163388597 - L1PB1 LINE L1 -167 5984 5776 21 0 0 0 chr5 39697373 39697394 -163388138 + AT_rich Low_complexity Low_complexity 1 21 0 369 332 123 23 chr5 39697415 39697635 -163387897 - L2 LINE L2 0 3272 3031 2385 101 0 0 chr5 39697724 39698030 -163387502 - AluSq SINE Alu -7 306 1 4037 185 23 26 chr5 39698036 39698128 -163387404 - L1MB8 LINE L1 -6 6172 6081 2300 105 3 13 chr5 39698128 39698441 -163387091 + AluSx SINE Alu 1 310 -2 4037 185 23 26 chr5 39698441 39699391 -163386141 - L1MB8 LINE L1 -97 6081 5136 252 365 116 19 chr5 39699437 39700041 -163385491 - L2 LINE L2 -337 2977 2304 1090 243 148 5 chr5 39700043 39700414 -163385118 - LTR16A LTR ERVL 0 450 27 199 316 13 82 chr5 39700447 39700605 -163384927 - L2 LINE L2 -1015 2299 2153 670 273 57 13 chr5 39700622 39700849 -163384683 - MLT1L LTR MaLR -11 604 368 1967 212 87 87 chr5 39700939 39701714 -163383818 - MER21B LTR ERV1 -69 794 20 475 196 0 22 chr5 39701737 39701829 -163383703 - MER21B LTR ERV1 -773 90 1 341 211 193 25 chr5 39701953 39702114 -163383418 - MLT1L LTR MaLR -427 188 1 317 320 56 60 chr5 39702139 39702423 -163383109 - L2 LINE L2 -1230 2084 1802 802 225 25 21 chr5 39702484 39702720 -163382812 + L1ME1 LINE L1 5930 6166 0 2185 123 3 3 chr5 39703027 39703327 -163382205 - AluSx SINE Alu -12 300 1 3532 130 7 0 chr5 39703539 39704114 -163381418 + L1MA4 LINE L1 5442 6020 -280 3236 161 33 0 chr5 39704209 39704748 -163380784 + MER41D LTR ERV1 1 557 0 1586 88 23 0 chr5 39705103 39705318 -163380214 + L1PA16 LINE L1 5935 6154 -12 1545 78 0 0 chr5 39705320 39705532 -163380000 - AluY SINE Alu 0 306 95 8348 66 3 7 chr5 39705532 39706607 -163378925 - MER11C LTR ERVK -1 1070 1 737 129 0 0 chr5 39706607 39706708 -163378824 - AluY SINE Alu -210 101 1 187 269 65 54 chr5 39706786 39706879 -163378653 - L2 LINE L2 -17 3296 3203 1569 82 26 39 chr5 39707160 39707393 -163378139 - MER30 DNA MER1_type 0 230 1 268 241 19 0 chr5 39707397 39707451 -163378081 - MIR3 SINE MIR -48 160 106 33 56 0 0 chr5 39707702 39707756 -163377776 + AT_rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr5 39707830 39707853 -163377679 + AT_rich Low_complexity Low_complexity 1 23 0 4981 159 36 32 chr5 39707857 39708168 -163377364 - L1MB4 LINE L1 -29 6151 5843 2810 16 0 6 chr5 39708168 39708480 -163377052 - AluYb8 SINE Alu -8 310 1 4981 159 36 32 chr5 39708480 39709092 -163376440 - L1MB4 LINE L1 -337 5843 5227 2096 123 7 0 chr5 39709092 39709384 -163376148 - AluSp SINE Alu -19 294 1 4981 159 36 32 chr5 39709384 39709910 -163375622 - L1MB4 LINE L1 -953 5227 4705 637 306 53 53 chr5 39710801 39711087 -163374445 - L2 LINE L2 -980 2334 2046 3277 176 117 12 chr5 39711087 39711745 -163373787 - LTR8A LTR ERV1 0 727 1 637 306 53 53 chr5 39711745 39711925 -163373607 - L2 LINE L2 -1267 2047 1868 2046 138 3 0 chr5 39712136 39712427 -163373105 + AluSx SINE Alu 1 292 -20 1099 155 57 5 chr5 39713031 39713223 -163372309 + Tigger3b DNA MER2_type 1 202 -1029 5039 109 31 32 chr5 39713223 39713879 -163371653 + MER4E LTR ERV1 1 657 -122 4367 115 1 65 chr5 39713879 39714436 -163371096 + MER41B LTR ERV1 1 509 -126 2217 116 3 10 chr5 39714436 39714747 -163370785 - AluSx SINE Alu -3 309 1 4367 115 1 65 chr5 39714747 39714867 -163370665 + MER41B LTR ERV1 509 635 0 5039 109 31 32 chr5 39714867 39714990 -163370542 + MER4E LTR ERV1 657 779 0 4815 111 41 49 chr5 39714990 39715838 -163369694 + Tigger3b DNA MER2_type 201 1041 -190 3022 116 45 4 chr5 39715838 39716305 -163369227 + LTR19A LTR ERV1 1 486 0 1082 184 0 0 chr5 39716305 39716479 -163369053 + Tigger3b DNA MER2_type 1037 1210 -22 227 264 40 11 chr5 39717536 39717710 -163367822 + (TTA)n Simple_repeat Simple_repeat 1 179 0 2006 122 31 7 chr5 39717758 39718052 -163367480 + AluSx SINE Alu 1 301 -11 490 294 200 40 chr5 39719070 39720048 -163365484 - L2 LINE L2 -455 2859 1725 386 309 40 63 chr5 39720058 39720282 -163365250 - MIR3 SINE MIR -36 226 9 186 360 30 10 chr5 39720353 39720453 -163365079 - L2 LINE L2 -528 2786 2685 336 198 69 60 chr5 39720552 39720668 -163364864 - MER113 DNA MER1_type? -83 438 322 486 71 200 0 chr5 39720680 39720750 -163364782 - AluSg/x SINE Alu -20 290 207 1423 110 0 0 chr5 39721049 39721231 -163364301 - AluSx SINE Alu -129 183 2 897 236 86 30 chr5 39721240 39721448 -163364084 - MER113 DNA MER1_type? -198 323 91 2442 71 0 16 chr5 39721448 39721758 -163363774 + AluY SINE Alu 1 305 -6 897 236 86 30 chr5 39721758 39721850 -163363682 - MER113 DNA MER1_type? -430 91 6 637 292 66 25 chr5 39722012 39722481 -163363051 - MLT1L LTR MaLR -8 607 97 320 329 187 35 chr5 39722905 39724318 -163361214 + L2 LINE L2 462 2144 -1170 2149 106 3 3 chr5 39724318 39724635 -163360897 - AluSx SINE Alu 0 317 1 320 329 187 35 chr5 39724635 39724803 -163360729 + L2 LINE L2 2144 2285 -1029 2181 126 12 0 chr5 39724822 39725147 -163360385 + MER47A DNA MER2_type 38 366 0 894 222 141 0 chr5 39725405 39725603 -163359929 + MIR SINE MIR 21 246 -16 212 387 120 20 chr5 39725812 39725902 -163359630 + L2 LINE L2 3102 3182 -90 558 113 0 0 chr5 39725902 39725982 -163359550 - MADE1 DNA Mariner 0 80 1 212 387 120 20 chr5 39725982 39726041 -163359491 + L2 LINE L2 3182 3266 -6 1485 192 105 19 chr5 39726409 39726732 -163358800 + MLT1A1 LTR MaLR 1 351 -14 445 305 23 15 chr5 39728546 39728677 -163356855 + MER5B DNA MER1_type 15 146 -32 2131 103 14 0 chr5 39729172 39729479 -163356053 - AluSx SINE Alu 0 311 1 22 35 0 0 chr5 39729810 39729839 -163355693 + AT_rich Low_complexity Low_complexity 1 29 0 811 263 144 41 chr5 39729890 39730253 -163355279 - L1MC4a LINE L1 -95 6026 5603 2517 121 100 5 chr5 39730253 39730642 -163354890 - MSTB LTR MaLR 0 426 1 811 263 144 41 chr5 39730642 39730742 -163354790 - L1MC4a LINE L1 -518 5603 5515 2185 175 3 14 chr5 39730957 39731312 -163354220 + MLT1A1 LTR MaLR 11 361 -4 244 267 0 0 chr5 39731581 39731626 -163353906 - MIR SINE MIR -195 67 23 2498 145 25 37 chr5 39731690 39732125 -163353407 + MSTB1 LTR MaLR 1 430 -2 1938 151 0 3 chr5 39733268 39733553 -163351979 + AluSx SINE Alu 1 284 -28 2166 104 0 23 chr5 39734352 39734659 -163350873 + AluSg SINE Alu 1 300 -10 2158 128 0 0 chr5 39735146 39735435 -163350097 + AluSx SINE Alu 15 303 -9 27 0 0 0 chr5 39735546 39735573 -163349959 + AT_rich Low_complexity Low_complexity 1 27 0 2223 91 19 3 chr5 39735616 39735870 -163349662 + L1PB3 LINE L1 5534 5795 -359 324 0 0 0 chr5 39735870 39735906 -163349626 + (CA)n Simple_repeat Simple_repeat 2 37 0 2223 91 19 3 chr5 39735906 39735960 -163349572 + L1PB3 LINE L1 5795 5847 -307 1610 95 95 0 chr5 39735966 39736188 -163349344 + L1PB3 LINE L1 5912 6154 0 273 128 0 0 chr5 39736188 39736235 -163349297 + (TA)n Simple_repeat Simple_repeat 1 47 0 763 174 59 42 chr5 39737132 39737328 -163348204 + MLT1B LTR MaLR 1 185 -189 2222 96 14 3 chr5 39737456 39737749 -163347783 + AluSx SINE Alu 5 300 -12 2290 103 0 3 chr5 39738124 39738424 -163347108 + AluSg SINE Alu 5 303 -7 225 311 0 44 chr5 39738562 39738652 -163346880 + MIR SINE MIR 69 154 -108 655 320 112 3 chr5 39738983 39739286 -163346246 + L2 LINE L2 2935 3270 -2 186 176 0 0 chr5 39739377 39739428 -163346104 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 2392 101 0 0 chr5 39739515 39739821 -163345711 + AluSx SINE Alu 1 306 -6 2251 216 68 44 chr5 39740174 39740702 -163344830 + MER87 LTR ERV1 1 541 0 279 361 21 0 chr5 39741186 39741283 -163344249 + MIR SINE MIR 46 144 -118 1821 129 46 26 chr5 39741284 39741586 -163343946 + THE1B LTR MaLR 1 308 -56 36153 37 1 0 chr5 39741586 39746684 -163338848 + L1PA3 LINE L1 1053 6155 0 204 125 0 0 chr5 39746695 39746727 -163338805 + (A)n Simple_repeat Simple_repeat 1 32 0 231 114 0 0 chr5 39747113 39747148 -163338384 + (A)n Simple_repeat Simple_repeat 1 35 0 516 83 0 14 chr5 39747148 39747220 -163338312 + THE1B LTR MaLR 304 374 -1 324 253 0 13 chr5 39747247 39747326 -163338206 + MIR SINE MIR 166 243 -19 1914 153 3 0 chr5 39747809 39748140 -163337392 - AluSx SINE Alu 0 332 1 374 281 102 83 chr5 39748384 39748634 -163336898 - MARNA DNA Mariner -9 577 333 2236 100 3 7 chr5 39748634 39748943 -163336589 + AluSp SINE Alu 1 308 -5 374 281 102 83 chr5 39748943 39749041 -163336491 - MARNA DNA Mariner -253 333 238 2158 131 0 10 chr5 39749041 39749355 -163336177 + AluSx SINE Alu 1 311 -1 374 281 102 83 chr5 39749355 39749535 -163335997 - MARNA DNA Mariner -348 238 38 254 343 88 22 chr5 39750977 39751158 -163334374 + L2 LINE L2 3065 3257 -15 180 0 0 0 chr5 39751236 39751256 -163334276 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 599 293 112 53 chr5 39751305 39751759 -163333773 - L1MEd LINE L1 -5099 1020 540 364 304 133 59 chr5 39751907 39752246 -163333286 - L1MEd LINE L1 -5733 386 23 612 0 0 0 chr5 39752506 39752574 -163332958 + (GA)n Simple_repeat Simple_repeat 1 68 0 2481 83 0 0 chr5 39754179 39754492 -163331040 + AluSq SINE Alu 1 313 0 310 277 149 0 chr5 39754920 39755026 -163330506 - MIR SINE MIR -67 141 36 215 211 19 19 chr5 39755125 39755177 -163330355 + MIR SINE MIR 22 73 -135 892 154 11 75 chr5 39755848 39755897 -163329635 - FRAM SINE Alu -136 40 145 2207 129 3 0 chr5 39755897 39756206 -163329326 - AluSx SINE Alu -2 310 1 892 154 11 75 chr5 39756206 39756344 -163329188 - FRAM SINE Alu -30 146 1 440 248 51 36 chr5 39757782 39757919 -163327613 - MARNA DNA Mariner -28 558 420 235 327 40 0 chr5 39758009 39758110 -163327422 + MARNA DNA Mariner 284 388 -198 666 62 0 0 chr5 39758116 39758196 -163327336 + MADE1 DNA Mariner 1 80 0 2427 92 0 6 chr5 39759749 39760063 -163325469 + AluSx SINE Alu 1 312 0 240 150 0 0 chr5 39760286 39760326 -163325206 - MIR SINE MIR -40 222 183 475 353 27 5 chr5 39761118 39761305 -163324227 + L3 LINE CR1 1339 1529 -48 276 100 0 0 chr5 39761455 39761495 -163324037 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1141 175 6 0 chr5 39761499 39761670 -163323862 - FAM SINE Alu -3 172 1 471 241 90 0 chr5 39761976 39762121 -163323411 + MER103 DNA DNA 8 165 -1 441 116 0 0 chr5 39764018 39764087 -163321445 + (GA)n Simple_repeat Simple_repeat 2 70 0 252 0 0 0 chr5 39765178 39765206 -163320326 + (A)n Simple_repeat Simple_repeat 1 28 0 406 279 75 80 chr5 39765250 39765451 -163320081 - MIR3 SINE MIR -7 201 2 191 170 43 21 chr5 39765504 39765551 -163319981 - MIR3 SINE MIR 0 208 161 264 125 47 16 chr5 39766291 39766355 -163319177 + GA-rich Low_complexity Low_complexity 3 68 0 366 171 0 0 chr5 39766669 39766739 -163318793 + (TG)n Simple_repeat Simple_repeat 2 71 0 1031 201 0 0 chr5 39767498 39767662 -163317870 - AluJo/FRAM SINE Alu -2 300 137 1527 201 44 17 chr5 39767664 39767957 -163317575 - AluJb SINE Alu -1 301 1 222 232 127 146 chr5 39769271 39769538 -163315994 + L2 LINE L2 3052 3313 0 216 154 26 0 chr5 39769543 39769582 -163315950 + L2 LINE L2 3230 3269 -3 2516 74 0 0 chr5 39769723 39770033 -163315499 - AluY SINE Alu -1 310 1 412 303 46 17 chr5 39770432 39770607 -163314925 + MIR SINE MIR 29 208 -54 1760 187 3 16 chr5 39771123 39771428 -163314104 + AluJb SINE Alu 1 301 -11 573 236 118 25 chr5 39771428 39771631 -163313901 + MER20B DNA MER1_type 558 779 -4 305 159 16 0 chr5 39772090 39772153 -163313379 + GA-rich Low_complexity Low_complexity 2 65 0 264 308 0 28 chr5 39773700 39773807 -163311725 - L1ME LINE L1 -422 5699 5596 2392 64 30 0 chr5 39773866 39774164 -163311368 - AluSp SINE Alu -6 307 1 271 271 85 70 chr5 39775146 39775275 -163310257 + L2 LINE L2 3181 3311 -2 704 294 34 18 chr5 39775712 39776039 -163309493 + L1ME LINE L1 2173 2504 -3642 526 282 32 58 chr5 39776126 39776435 -163309097 + L1ME LINE L1 3715 4015 -2131 3272 142 46 34 chr5 39776447 39777038 -163308494 + MER39B LTR ERV1 56 653 0 613 300 64 11 chr5 39777054 39777334 -163308198 + L1ME LINE L1 4031 4325 -1821 1696 122 0 0 chr5 39777336 39777565 -163307967 + AluSx SINE Alu 1 229 -83 561 295 99 11 chr5 39777569 39777942 -163307590 + L1ME LINE L1 4411 4816 -1330 * 644 276 35 77 chr5 39777924 39778432 -163307100 + L1ME LINE L1 5318 5810 -352 1299 178 0 0 chr5 39783807 39784015 -163301517 - AluJb SINE Alu -20 292 85 339 280 42 34 chr5 39784479 39784597 -163300935 - MIR3 SINE MIR -32 176 58 195 114 0 0 chr5 39785068 39785103 -163300429 + (TA)n Simple_repeat Simple_repeat 2 36 0 491 235 209 0 chr5 39786205 39786358 -163299174 - MIR3 SINE MIR 0 208 24 302 261 150 0 chr5 39786956 39787078 -163298454 - MER5A DNA MER1_type 0 189 20 388 318 3 25 chr5 39790499 39790718 -163294814 + CT-rich Low_complexity Low_complexity 1 214 0 2608 53 0 0 chr5 39790731 39791033 -163294499 - AluY SINE Alu -9 302 1 449 206 103 73 chr5 39791051 39791216 -163294316 + MIR SINE MIR 29 198 -64 214 371 38 9 chr5 39791375 39791480 -163294052 + MIR SINE MIR 19 126 -82 386 250 74 9 chr5 39793224 39793332 -163292200 - MIR SINE MIR -128 134 20 217 271 51 76 chr5 39793458 39793576 -163291956 + MIR SINE MIR 81 195 -67 402 331 120 35 chr5 39794499 39794532 -163291000 + L1MC4 LINE L1 7126 7155 -887 2305 100 10 0 chr5 39794532 39794842 -163290690 + AluSp SINE Alu 1 313 0 402 331 120 35 chr5 39794842 39795149 -163290383 + L1MC4 LINE L1 7155 7495 -547 328 300 43 26 chr5 39795272 39795505 -163290027 + L1MC5 LINE L1 7511 7747 -214 1976 157 6 6 chr5 39795555 39795868 -163289664 - AluSq SINE Alu 0 313 1 2173 107 0 10 chr5 39795868 39796167 -163289365 - AluSq SINE Alu -17 296 1 640 305 60 20 chr5 39797383 39797632 -163287900 - MIR SINE MIR 0 262 4 2518 150 17 0 chr5 39797732 39798145 -163287387 + L1MB4 LINE L1 5364 5783 -391 2165 125 0 3 chr5 39798147 39798442 -163287090 + AluSq SINE Alu 1 294 -19 676 252 81 13 chr5 39798455 39798473 -163287059 + L1MB4 LINE L1 5901 5916 -264 216 0 0 0 chr5 39798473 39798497 -163287035 + (TA)n Simple_repeat Simple_repeat 2 25 0 676 252 81 13 chr5 39798497 39798740 -163286792 + L1MB4 LINE L1 5916 6179 -1 41236 68 7 5 chr5 39799046 39805173 -163280359 + L1PA5 LINE L1 11 6152 -2 309 26 0 0 chr5 39805744 39805782 -163279750 + (CA)n Simple_repeat Simple_repeat 2 39 0 1136 178 0 49 chr5 39806362 39806587 -163278945 - MER20 DNA MER1_type -5 214 1 275 0 29 0 chr5 39807035 39807070 -163278462 + (CA)n Simple_repeat Simple_repeat 2 37 0 210 71 0 0 chr5 39807383 39807411 -163278121 + (TC)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr5 39807411 39807435 -163278097 + (TG)n Simple_repeat Simple_repeat 1 24 0 2324 116 0 0 chr5 39807466 39807776 -163277756 - AluSg SINE Alu 0 310 1 190 244 13 13 chr5 39807899 39807977 -163277555 + (TA)n Simple_repeat Simple_repeat 2 79 0 273 29 0 0 chr5 39810519 39810553 -163274979 + (TG)n Simple_repeat Simple_repeat 2 35 0 214 191 63 32 chr5 39810900 39810952 -163274580 + CT-rich Low_complexity Low_complexity 5 61 -8 2199 112 10 3 chr5 39810952 39811248 -163274284 - AluSg SINE Alu -12 298 1 378 0 0 0 chr5 39811381 39811423 -163274109 + (TG)n Simple_repeat Simple_repeat 1 42 0 298 360 14 0 chr5 39812722 39812869 -163272663 + (CA)n Simple_repeat Simple_repeat 2 150 0 389 248 60 8 chr5 39813156 39813273 -163272259 - MIR SINE MIR -109 153 31 23 33 0 0 chr5 39814326 39814356 -163271176 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 39814547 39814570 -163270962 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2431 63 0 7 chr5 39814753 39815052 -163270480 - AluY SINE Alu -14 297 1 343 242 99 50 chr5 39815282 39815443 -163270089 - MIR SINE MIR 0 262 94 1287 237 25 69 chr5 39817629 39817662 -163267870 - L1ME3A LINE L1 -22 6148 6115 2284 130 12 6 chr5 39817662 39818008 -163267524 + MER7A DNA MER2_type 1 346 0 1287 237 25 69 chr5 39818008 39818421 -163267111 - L1ME3A LINE L1 -55 6115 5722 1929 158 0 3 chr5 39818765 39819068 -163266464 - AluJb SINE Alu -9 303 2 279 320 10 93 chr5 39820497 39820549 -163264983 - MER5B DNA MER1_type 0 178 123 2152 145 3 0 chr5 39820549 39820860 -163264672 - AluSx SINE Alu 0 312 1 279 320 10 93 chr5 39820860 39821001 -163264531 - MER5B DNA MER1_type -55 123 1 601 216 101 0 chr5 39821243 39821391 -163264141 - MIR SINE MIR -28 234 72 228 276 58 23 chr5 39821391 39821478 -163264054 - MIR SINE MIR -165 97 8 263 257 29 29 chr5 39821733 39821838 -163263694 + MER5A DNA MER1_type 81 185 -4 290 265 49 103 chr5 39822082 39822435 -163263097 + MLT1I LTR MaLR 98 549 0 398 203 8 94 chr5 39822738 39822866 -163262666 - MIR3 SINE MIR 0 208 92 7492 130 39 9 chr5 39823167 39823835 -163261697 + Tigger3b DNA MER2_type 1 721 -2307 2267 93 0 29 chr5 39823835 39824145 -163261387 + AluSg SINE Alu 1 301 -9 7492 130 39 9 chr5 39824145 39824672 -163260860 + Tigger3b DNA MER2_type 721 1231 0 310 305 46 48 chr5 39824672 39824918 -163260614 + MLT1J2 LTR MaLR 155 436 -14 311 159 66 0 chr5 39825632 39825783 -163259749 + (TA)n Simple_repeat Simple_repeat 1 161 0 2033 125 0 7 chr5 39825783 39826070 -163259462 - AluSg SINE Alu -25 285 1 244 61 0 61 chr5 39826354 39826403 -163259129 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 * 246 62 0 0 chr5 39826399 39826431 -163259101 + (TCCCG)n Simple_repeat Simple_repeat 4 35 0 * 498 17 0 0 chr5 39826429 39826488 -163259044 + (TCTCC)n Simple_repeat Simple_repeat 2 60 0 2249 111 7 0 chr5 39826488 39826785 -163258747 - AluSx SINE Alu -13 299 1 40878 73 7 3 chr5 39828201 39834242 -163251290 + L1PA5 LINE L1 11 6073 -81 231 318 82 0 chr5 39837583 39837668 -163247864 + L2 LINE L2 3180 3271 -1 198 297 33 0 chr5 39837705 39837796 -163247736 + L3b LINE CR1 1374 1467 -116 25 83 0 0 chr5 39837809 39837869 -163247663 + AT_rich Low_complexity Low_complexity 1 60 0 343 252 141 0 chr5 39837966 39838101 -163247431 + L1ME LINE L1 5542 5695 -426 616 141 8 55 chr5 39839875 39840162 -163245370 + (TCCA)n Simple_repeat Simple_repeat 1 273 0 537 218 257 15 chr5 39840485 39840691 -163244841 + MLT1L LTR MaLR 3 258 -357 779 251 35 15 chr5 39841624 39841823 -163243709 + MER3 DNA MER1_type 7 209 0 280 269 21 43 chr5 39843497 39843590 -163241942 + MER20 DNA MER1_type 1 91 -128 * 659 245 73 10 chr5 39843582 39843774 -163241758 + MER20 DNA MER1_type 16 219 0 453 217 58 14 chr5 39844309 39844447 -163241085 - L1ME4a LINE L1 0 6121 5978 1325 216 15 29 chr5 39844880 39845222 -163240310 - L1MC4 LINE L1 -2 8040 7704 1662 166 10 33 chr5 39845398 39845699 -163239833 - AluJb SINE Alu -18 294 1 261 0 0 0 chr5 39845991 39846020 -163239512 + (CA)n Simple_repeat Simple_repeat 1 29 0 366 333 19 31 chr5 39847230 39847392 -163238140 + L3 LINE CR1 949 1108 -469 874 244 72 0 chr5 39847427 39847636 -163237896 - MER58A DNA MER1_type 0 224 1 355 326 95 21 chr5 39847637 39847879 -163237653 + L3 LINE CR1 1276 1535 -42 184 321 0 73 chr5 39847958 39848067 -163237465 + L2 LINE L2 3161 3261 -11 682 274 87 4 chr5 39848204 39848445 -163237087 - MIR SINE MIR 0 262 2 457 242 0 90 chr5 39848471 39848649 -163236883 - L2 LINE L2 0 3313 3152 1895 74 53 39 chr5 39848840 39849124 -163236408 - L1PA11 LINE L1 0 6174 5887 261 275 11 11 chr5 39849869 39849960 -163235572 - MIR SINE MIR -9 253 163 186 327 0 0 chr5 39850090 39850145 -163235387 - L2 LINE L2 -4 3309 3255 274 341 80 14 chr5 39850180 39850318 -163235214 + MIR3 SINE MIR 2 148 -60 201 254 100 77 chr5 39850842 39850972 -163234560 + L3 LINE CR1 1313 1445 -132 22 0 0 0 chr5 39851209 39851231 -163234301 + AT_rich Low_complexity Low_complexity 1 22 0 327 297 146 38 chr5 39853184 39853396 -163232136 + MIR SINE MIR 28 262 0 325 284 92 14 chr5 39853443 39853584 -163231948 - MIR SINE MIR -77 185 34 1831 153 40 23 chr5 39854208 39854555 -163230977 + L1MB7 LINE L1 5746 6098 -86 375 208 56 0 chr5 39854555 39854627 -163230905 + Tigger5 DNA MER2_type 1 76 -2247 258 173 77 0 chr5 39854638 39854690 -163230842 - Tigger5 DNA MER2_type -19 2304 2249 400 145 0 108 chr5 39854695 39854778 -163230754 + Tigger5 DNA MER2_type 2250 2323 0 278 111 0 0 chr5 39854804 39854840 -163230692 + MER2 DNA MER2_type 1 36 -309 348 179 0 0 chr5 39854850 39854906 -163230626 - MER2 DNA MER2_type -234 111 56 1045 199 107 46 chr5 39854917 39855198 -163230334 + MER2 DNA MER2_type 48 345 0 239 203 68 0 chr5 39855199 39855258 -163230274 + L1MB7 LINE L1 6122 6184 0 2047 191 66 7 chr5 39857279 39857720 -163227812 + MLT1C LTR MaLR 1 467 0 2735 133 4 84 chr5 39857891 39858388 -163227144 - LTR32 LTR ERVL 0 471 15 267 279 41 20 chr5 39859006 39859153 -163226379 - L1MC5 LINE L1 -182 7779 7630 291 284 99 57 chr5 39859351 39859411 -163226121 - MIR3 SINE MIR -32 176 120 2646 183 26 51 chr5 39859411 39859979 -163225553 + MLT2B3 LTR ERVL 1 554 0 291 284 99 57 chr5 39859979 39860059 -163225473 - MIR3 SINE MIR -88 120 30 303 371 125 11 chr5 39860069 39860341 -163225191 - L3b LINE CR1 -128 1455 1153 382 277 10 0 chr5 39860508 39860609 -163224923 + L1PA7 LINE L1 5862 5963 -191 2023 70 19 0 chr5 39860536 39860792 -163224740 + L1PB1 LINE L1 5891 6151 0 638 178 171 0 chr5 39861369 39861521 -163224011 - MER5B DNA MER1_type 0 178 1 1235 172 43 0 chr5 39862939 39863148 -163222384 - MER20 DNA MER1_type -1 218 1 974 176 74 0 chr5 39863360 39863536 -163221996 - MER5A DNA MER1_type 0 189 1 344 326 21 33 chr5 39863739 39863914 -163221618 - MIR SINE MIR -62 146 16 251 91 0 0 chr5 39864403 39864436 -163221096 + AluSg/x SINE Alu 171 203 -99 774 122 70 0 chr5 39864436 39864551 -163220981 + AluSg/x SINE Alu 170 292 -17 21 71 0 0 chr5 39864554 39864596 -163220936 + AT_rich Low_complexity Low_complexity 1 42 0 956 92 14 7 chr5 39864842 39864983 -163220549 + L1MB2 LINE L1 6030 6171 0 534 211 21 21 chr5 39865391 39865533 -163219999 - MER104 DNA Tc2 -3 177 36 302 167 19 0 chr5 39865546 39865600 -163219932 + L1MA9 LINE L1 5976 6030 -282 2118 91 63 3 chr5 39865734 39866021 -163219511 - AluSx SINE Alu -8 304 1 4277 99 13 10 chr5 39916972 39917659 -163167873 - L1MA2 LINE L1 -149 6155 5467 654 298 4 38 chr5 39917732 39917970 -163167562 + MLT1I LTR MaLR 180 409 0 2831 90 0 5 chr5 39918611 39918987 -163166545 + THE1C LTR MaLR 1 374 -1 281 169 13 39 chr5 39919003 39919080 -163166452 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 9185 181 45 17 chr5 39919325 39922254 -163163278 - L1MB1 LINE L1 -1 6167 3142 1859 141 42 7 chr5 39922254 39922538 -163162994 - AluSx SINE Alu -18 294 1 9185 181 45 17 chr5 39922538 39922616 -163162916 - L1MB1 LINE L1 -3026 3142 3068 1854 179 0 7 chr5 39922765 39923067 -163162465 + AluJo SINE Alu 1 300 -12 2034 171 55 2 chr5 39923195 39923593 -163161939 - MSTB1 LTR MaLR -12 420 2 203 234 0 43 chr5 39923852 39923946 -163161586 + (CATATA)n Simple_repeat Simple_repeat 4 93 0 504 303 87 19 chr5 39923963 39924435 -163161097 - L1ME2 LINE L1 -218 5929 5412 284 293 81 14 chr5 39924489 39924711 -163160821 - L1ME2 LINE L1 -833 5296 5060 355 269 72 87 chr5 39924805 39925013 -163160519 - L1ME2 LINE L1 -1201 4928 4724 683 293 117 29 chr5 39925028 39925646 -163159886 - L1ME2 LINE L1 -1454 4675 4004 2024 176 23 13 chr5 39925699 39926085 -163159447 - MLT1B LTR MaLR 0 390 1 1143 289 63 40 chr5 39926646 39927776 -163157756 - L1ME2 LINE L1 -2329 3800 2645 320 299 159 13 chr5 39928003 39928160 -163157372 - L1ME2 LINE L1 -3756 2373 2194 2332 109 6 0 chr5 39928173 39928614 -163156918 - L1P4 LINE L1 -564 5604 5162 3189 73 34 2 chr5 39928614 39929053 -163156479 + L1PA13 LINE L1 5704 6158 -5 1227 246 32 69 chr5 39929081 39929618 -163155914 - L1ME3A LINE L1 -27 6143 5627 1898 52 8 56 chr5 39930171 39930438 -163155094 + AluY SINE Alu 44 297 -14 233 276 10 10 chr5 39930446 39930544 -163154988 - L1M2 LINE L1 -4280 2569 2472 965 184 103 17 chr5 39930565 39930798 -163154734 - LTR39 LTR ERV1 -530 253 1 313 383 27 16 chr5 39930809 39930992 -163154540 - L1ME2 LINE L1 -5603 516 332 2226 106 23 3 chr5 39931859 39932161 -163153371 - AluSc SINE Alu -1 308 1 501 17 0 0 chr5 39932222 39932280 -163153252 + (TTTTA)n Simple_repeat Simple_repeat 1 58 0 2227 58 0 0 chr5 39932280 39932540 -163152992 - AluY SINE Alu -35 276 17 1250 171 199 37 chr5 39933036 39933439 -163152093 + LTR48 LTR ERV1 1 468 -319 411 180 38 66 chr5 39933461 39933596 -163151936 + LTR48 LTR ERV1 594 636 -71 207 0 0 0 chr5 39933596 39933619 -163151913 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 411 180 38 66 chr5 39933619 39933687 -163151845 + LTR48 LTR ERV1 636 704 -3 1312 173 27 52 chr5 39934279 39934433 -163151099 - MER33 DNA MER1_type -2262 323 167 2243 110 0 0 chr5 39934433 39934725 -163150807 - AluSx SINE Alu -20 292 1 1312 173 27 52 chr5 39934725 39934899 -163150633 - MER33 DNA MER1_type -2418 167 3 1095 283 84 21 chr5 39935576 39936003 -163149529 - MLT1J LTR MaLR -52 459 6 296 179 0 75 chr5 39938351 39938418 -163147114 + MIR SINE MIR 78 139 -69 892 183 6 0 chr5 39940111 39940280 -163145252 - MER3 DNA MER1_type -86 123 1 1935 166 7 7 chr5 39940900 39941208 -163144324 - AluJb SINE Alu -4 308 1 840 73 8 0 chr5 39941217 39941341 -163144191 - L1MA8 LINE L1 -3 6288 6164 1804 229 48 50 chr5 39942368 39942910 -163142622 - MLT1F LTR MaLR -1 541 1 24 0 0 0 chr5 39943007 39943031 -163142501 + AT_rich Low_complexity Low_complexity 1 24 0 1571 184 13 16 chr5 39943455 39943760 -163141772 - AluJb SINE Alu -8 304 1 377 287 72 50 chr5 39945668 39945849 -163139683 - MIR3 SINE MIR -21 187 3 1722 146 69 33 chr5 39946036 39946398 -163139134 + THE1C LTR MaLR 1 375 0 248 282 61 103 chr5 39946589 39946802 -163138730 + MIR SINE MIR 59 262 0 416 292 143 19 chr5 39948537 39948746 -163136786 + MIR SINE MIR 23 257 -5 361 224 26 79 chr5 39948834 39948986 -163136546 + L2 LINE L2 3169 3312 -1 289 362 21 7 chr5 39949129 39949270 -163136262 + MIR3 SINE MIR 3 145 -63 2508 20 0 3 chr5 39949409 39949731 -163135801 + AluY SINE Alu 1 311 0 240 59 0 0 chr5 39949846 39949880 -163135652 + (A)n Simple_repeat Simple_repeat 1 34 0 277 289 6 82 chr5 39951552 39951711 -163133821 - MIR SINE MIR -66 196 50 964 138 39 6 chr5 39951820 39952001 -163133531 - MER53 DNA DNA -2 187 1 18609 179 31 17 chr5 39952060 39958771 -163126761 + L1PA13 LINE L1 1 6813 -1 569 185 22 37 chr5 39958875 39959010 -163126522 + MLT1C LTR MaLR 6 138 -252 1809 180 82 20 chr5 39959010 39959362 -163126170 + MSTB LTR MaLR 1 382 -44 2107 129 19 43 chr5 39959362 39959735 -163125797 + THE1B LTR MaLR 1 364 0 1809 180 82 20 chr5 39959735 39959783 -163125749 + MSTB LTR MaLR 382 426 0 1397 160 27 68 chr5 39959784 39960122 -163125410 + MLT1C LTR MaLR 142 465 -2 190 164 36 0 chr5 39961321 39961376 -163124156 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 185 194 0 111 chr5 39961382 39961454 -163124078 + L2 LINE L2 3152 3215 -98 190 275 87 0 chr5 39961535 39961604 -163123928 + MIR SINE MIR 123 197 -65 532 289 54 24 chr5 39961639 39961805 -163123727 - MIR SINE MIR -74 188 18 201 222 0 0 chr5 39962312 39962348 -163123184 + (CA)n Simple_repeat Simple_repeat 1 36 0 222 208 0 0 chr5 39962366 39962414 -163123118 + (TA)n Simple_repeat Simple_repeat 1 48 0 183 218 0 0 chr5 39962463 39962518 -163123014 + (TA)n Simple_repeat Simple_repeat 2 56 0 305 217 48 0 chr5 39962619 39962702 -163122830 + L1MC3 LINE L1 6571 6657 -1128 2112 87 13 51 chr5 39962779 39963091 -163122441 - AluY SINE Alu -11 300 1 717 277 177 62 chr5 39963564 39963954 -163121578 + L2 LINE L2 2879 3313 0 1058 222 69 29 chr5 39964653 39965032 -163120500 + LTR37A LTR ERV1 33 426 0 22 0 0 0 chr5 39965784 39965806 -163119726 + AT_rich Low_complexity Low_complexity 1 22 0 5413 147 19 5 chr5 39965817 39966707 -163118825 - MER4D LTR ERV1 0 903 1 1661 194 146 7 chr5 39967320 39967723 -163117809 + MLT1D LTR MaLR 1 459 -46 589 319 20 20 chr5 39968451 39968655 -163116877 - MIR SINE MIR -48 214 11 1690 177 16 22 chr5 39968738 39969049 -163116483 + AluJb SINE Alu 1 309 -3 567 285 130 20 chr5 39969286 39969486 -163116046 - MIR SINE MIR -38 224 3 404 309 28 51 chr5 39969613 39969791 -163115741 - MIR SINE MIR -54 208 35 253 239 14 14 chr5 39970092 39970163 -163115369 + MER113 DNA MER1_type? 2 72 -449 248 312 144 16 chr5 39970855 39970980 -163114552 - MIR SINE MIR -73 189 49 895 204 60 156 chr5 39970992 39971472 -163114060 + MLT1F1 LTR MaLR 6 439 -128 2280 85 24 61 chr5 39971949 39972144 -163113388 - THE1B LTR MaLR 0 364 188 2201 104 0 26 chr5 39972144 39972452 -163113080 - AluY SINE Alu -11 300 1 2280 85 24 61 chr5 39972452 39972634 -163112898 - THE1B LTR MaLR -176 188 1 731 242 0 28 chr5 39973125 39973307 -163112225 - AluJo SINE Alu -14 298 122 2468 182 55 108 chr5 39973773 39974541 -163110991 - LTR8A LTR ERV1 0 727 1 20035 87 25 23 chr5 39976421 39980478 -163105054 - L1PA7 LINE L1 0 6154 2092 12092 111 13 29 chr5 39980580 39983416 -163102116 - L1P3 LINE L1 -3608 2853 1 1168 167 39 20 chr5 39984155 39984359 -163101173 - AluJb SINE Alu -101 211 4 261 0 0 0 chr5 39984360 39984389 -163101143 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr5 39984447 39984490 -163101042 + (TG)n Simple_repeat Simple_repeat 2 44 0 257 256 110 0 chr5 39984854 39984936 -163100596 - L2 LINE L2 0 3313 3223 557 276 123 0 chr5 39984940 39985110 -163100422 - MIR SINE MIR -13 249 59 2202 36 0 0 chr5 39985342 39985595 -163099937 + AluY SINE Alu 52 304 -7 21 0 0 0 chr5 39986157 39986178 -163099354 + AT_rich Low_complexity Low_complexity 1 21 0 304 232 0 0 chr5 39986265 39986334 -163099198 + Charlie5 DNA MER1_type 2 70 -2542 482 176 110 7 chr5 39986337 39986473 -163099059 + Charlie5 DNA MER1_type 2475 2624 0 550 325 16 10 chr5 39987355 39987549 -163097983 + MIR SINE MIR 12 206 -56 2084 98 36 0 chr5 39988097 39988372 -163097160 + AluSp SINE Alu 1 285 -28 1062 313 74 0 chr5 39990567 39990944 -163094588 - LTR16C LTR ERVL -18 473 69 356 267 73 33 chr5 39992037 39992187 -163093345 - MIR SINE MIR -71 191 36 22 80 0 0 chr5 39994103 39994153 -163091379 + AT_rich Low_complexity Low_complexity 1 50 0 484 308 65 28 chr5 39994887 39995096 -163090436 + MIR SINE MIR 7 228 -34 2028 152 20 47 chr5 39995096 39995497 -163090035 + MLT1B LTR MaLR 1 390 0 484 308 65 28 chr5 39995497 39995534 -163089998 + MIR SINE MIR 228 262 0 311 309 11 11 chr5 39996713 39996807 -163088725 + MIR3 SINE MIR 113 206 -2 28 29 0 0 chr5 39997239 39997274 -163088258 + AT_rich Low_complexity Low_complexity 1 35 0 1911 166 0 7 chr5 39997287 39997577 -163087955 + AluSx SINE Alu 1 288 -24 715 171 0 0 chr5 39997577 39997688 -163087844 - AluJb SINE Alu -201 111 1 195 310 103 43 chr5 39998020 39998136 -163087396 + L2 LINE L2 3191 3313 0 2013 94 57 13 chr5 39998354 39998652 -163086880 + AluSx SINE Alu 2 312 0 186 65 43 22 chr5 40000134 40000180 -163085352 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 511 247 153 28 chr5 40000363 40000587 -163084945 - MIR SINE MIR 0 262 16 263 230 219 62 chr5 40000701 40000879 -163084653 - L3 LINE CR1 -26 1551 1346 1498 244 21 41 chr5 40001021 40001489 -163084043 - LTR40b LTR ERVL -3 459 1 296 285 39 50 chr5 40001556 40001735 -163083797 - L3 LINE CR1 -606 971 795 2311 114 0 9 chr5 40001836 40002151 -163083381 - AluSx SINE Alu 0 312 1 394 327 134 27 chr5 40002282 40002547 -163082985 + L2 LINE L2 2770 3054 -218 1899 170 7 3 chr5 40002842 40003142 -163082390 + AluJb SINE Alu 1 301 -11 25 0 0 0 chr5 40003918 40003943 -163081589 + AT_rich Low_complexity Low_complexity 1 25 0 380 296 107 45 chr5 40003978 40004867 -163080665 + L1MCb LINE L1 1014 2172 -4573 2298 109 0 0 chr5 40005306 40005600 -163079932 - AluSx SINE Alu -18 294 1 456 248 68 60 chr5 40006061 40006311 -163079221 + MIR SINE MIR 11 262 0 303 321 92 38 chr5 40006431 40006671 -163078861 - L3 LINE CR1 -195 1382 1130 1980 158 20 35 chr5 40006739 40007017 -163078515 + Tigger2 DNA MER2_type 1 282 -2436 4532 67 5 0 chr5 40007017 40007602 -163077930 + L1PA13 LINE L1 5573 6160 -3 1980 158 20 35 chr5 40007602 40007760 -163077772 + Tigger2 DNA MER2_type 282 2710 -8 1910 154 3 20 chr5 40008679 40009024 -163076508 - MER46B DNA MER2_type -22 214 1 2371 107 25 25 chr5 40009246 40009610 -163075922 + THE1B LTR MaLR 1 364 0 370 282 16 114 chr5 40009715 40009970 -163075562 - MLT1I LTR MaLR -146 263 34 1671 117 182 0 chr5 40011256 40011520 -163074012 - AluSx SINE Alu 0 312 1 33 0 0 0 chr5 40012780 40012813 -163072719 + AT_rich Low_complexity Low_complexity 1 33 0 33 56 0 0 chr5 40012900 40012954 -163072578 + AT_rich Low_complexity Low_complexity 1 54 0 373 266 140 42 chr5 40012954 40013168 -163072364 - L1M4 LINE L1 -1233 4913 4679 4123 198 41 2 chr5 40013177 40013977 -163071555 + L1PA13 LINE L1 2 832 -5955 2948 182 28 17 chr5 40013981 40019611 -163065921 + L1PA13 LINE L1 890 6777 -37 25 0 0 0 chr5 40019611 40019636 -163065896 + AT_rich Low_complexity Low_complexity 1 25 0 867 230 65 18 chr5 40019765 40020042 -163065490 - L1ME LINE L1 -698 5464 5156 2188 105 10 3 chr5 40020042 40020338 -163065194 - AluSq SINE Alu -15 298 1 867 230 65 18 chr5 40020338 40020544 -163064988 - L1ME LINE L1 -1006 5156 4961 1248 236 21 45 chr5 40021091 40021467 -163064065 + MLT2B1 LTR ERVL 1 416 -104 270 115 0 0 chr5 40021500 40021552 -163063980 + (TA)n Simple_repeat Simple_repeat 1 52 0 314 311 11 0 chr5 40022500 40022590 -163062942 - MER81 DNA DNA -21 93 3 719 259 113 37 chr5 40022643 40022853 -163062679 - L1MC4a LINE L1 -1958 5850 5601 2539 114 5 11 chr5 40022853 40023230 -163062302 - THE1C LTR MaLR 0 375 1 719 259 113 37 chr5 40023230 40023374 -163062158 - L1MC4a LINE L1 -2207 5601 5469 808 340 66 28 chr5 40023708 40024313 -163061219 - L1MC4a LINE L1 -984 5162 4535 21 0 0 0 chr5 40024323 40024344 -163061188 + AT_rich Low_complexity Low_complexity 1 21 0 254 311 90 0 chr5 40024540 40024762 -163060770 - L1MC4a LINE L1 -1836 4310 4069 1081 123 6 0 chr5 40024813 40024976 -163060556 + L1PA16 LINE L1 5621 5784 -382 41714 41 2 1 chr5 40025000 40031138 -163054394 + L1PA3 LINE L1 13 6152 -3 2271 137 50 0 chr5 40031153 40031532 -163054000 + L1PA16 LINE L1 5769 6166 0 355 258 35 62 chr5 40031549 40031809 -163053723 - L1MC4a LINE L1 -2166 3980 3728 450 265 73 69 chr5 40031959 40032371 -163053161 - L1MC4a LINE L1 -2629 3517 3075 1258 279 77 26 chr5 40032540 40033074 -163052458 + L1ME3A LINE L1 5326 5886 -284 234 254 0 0 chr5 40033242 40033297 -163052235 + L1ME3A LINE L1 6027 6081 -89 21 36 0 0 chr5 40033298 40033326 -163052206 + AT_rich Low_complexity Low_complexity 1 28 0 732 251 74 35 chr5 40033911 40034194 -163051338 + LTR16C LTR ERVL 194 487 -4 701 249 87 4 chr5 40034799 40035040 -163050492 + MER45C DNA AcHobo 5 265 -688 669 197 151 18 chr5 40035134 40035352 -163050180 + MER45C DNA AcHobo 707 953 0 1279 153 14 5 chr5 40035474 40035689 -163049843 - L1PA16 LINE L1 -9 6157 5941 223 298 35 0 chr5 40037464 40037521 -163048011 + L2 LINE L2 3181 3239 -33 280 322 25 41 chr5 40037617 40037738 -163047794 - MIR SINE MIR -61 147 29 1828 181 17 56 chr5 40037932 40038342 -163047190 - MSTD LTR MaLR 0 396 3 306 333 52 75 chr5 40038507 40038681 -163046851 - L2 LINE L2 -1 3271 3102 25 65 0 0 chr5 40039123 40039169 -163046363 + AT_rich Low_complexity Low_complexity 1 46 0 1894 124 4 8 chr5 40039403 40039669 -163045863 - AluSx SINE Alu -11 301 37 2361 78 0 0 chr5 40039695 40039990 -163045542 + AluY SINE Alu 1 295 -16 332 205 12 169 chr5 40040019 40040185 -163045347 - MER102a DNA MER1_type 0 330 191 1841 143 56 3 chr5 40040529 40040815 -163044717 + AluJb SINE Alu 3 303 -9 215 392 0 0 chr5 40040907 40041009 -163044523 + L2 LINE L2 2950 3051 -221 867 186 134 22 chr5 40041347 40041549 -163043983 - MLT1D LTR MaLR 0 505 272 2252 136 34 0 chr5 40041549 40041901 -163043631 - THE1B LTR MaLR 0 364 1 867 186 134 22 chr5 40041901 40041929 -163043603 - MLT1D LTR MaLR -233 272 249 1555 205 0 18 chr5 40041984 40042267 -163043265 - AluJb SINE Alu -34 278 1 499 175 0 117 chr5 40042277 40042414 -163043118 - MLT1D LTR MaLR -396 109 2 21 0 0 0 chr5 40042928 40042949 -163042583 + AT_rich Low_complexity Low_complexity 1 21 0 276 109 0 0 chr5 40043404 40043450 -163042082 + MADE1 DNA Mariner 35 80 0 1807 234 92 8 chr5 40043459 40043950 -163041582 - MLT1F LTR MaLR -10 532 1 309 284 48 106 chr5 40043963 40044361 -163041171 - MLT1F-int LTR MaLR -14 1357 983 382 356 11 11 chr5 40044503 40044683 -163040849 - MLT1F-int LTR MaLR -493 878 699 475 315 30 12 chr5 40044849 40045014 -163040518 - MLT1F LTR MaLR -369 173 6 22 0 0 0 chr5 40045021 40045043 -163040489 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 40045122 40045143 -163040389 + AT_rich Low_complexity Low_complexity 1 21 0 216 366 12 0 chr5 40046616 40046698 -163038834 - L3b LINE CR1 -69 1514 1432 766 291 73 24 chr5 40046714 40047126 -163038406 + MLT1J1 LTR MaLR 15 446 0 1906 186 84 5 chr5 40047763 40048156 -163037376 - MSTB LTR MaLR -2 424 1 914 224 41 0 chr5 40049197 40049393 -163036139 + MER63A DNA MER1_type 1 204 -6 997 185 70 23 chr5 40049754 40050013 -163035519 - L1 LINE L1 -1693 4453 4183 728 154 87 0 chr5 40050017 40050166 -163035366 + L1MB1 LINE L1 5971 6132 -57 * 5351 147 27 17 chr5 40050164 40051665 -163033867 + L1MA9 LINE L1 4797 6312 0 1021 106 25 127 chr5 40051666 40051903 -163033629 + L1MA10 LINE L1 6121 6333 -1 341 279 75 54 chr5 40052215 40052771 -163032761 + L1MEd LINE L1 599 1166 -4953 960 349 121 10 chr5 40052820 40053416 -163032116 + L2 LINE L2 2125 2786 -528 1271 239 86 35 chr5 40053435 40053891 -163031641 + MLT1D LTR MaLR 26 504 -1 792 285 10 0 chr5 40054074 40054281 -163031251 - LTR16C LTR ERVL 0 491 283 655 293 87 57 chr5 40056456 40056695 -163028837 - L2 LINE L2 0 3313 3083 2262 106 7 0 chr5 40056695 40056997 -163028535 + AluSx SINE Alu 1 304 -8 2083 111 52 0 chr5 40057004 40057292 -163028240 + AluSx SINE Alu 1 303 -9 655 293 87 57 chr5 40057292 40057413 -163028119 - L2 LINE L2 -235 3078 2934 309 343 30 10 chr5 40057466 40057565 -163027967 - L2 LINE L2 -25 3247 3147 1088 206 14 0 chr5 40057938 40058152 -163027380 + U3 snRNA snRNA 1 217 0 417 139 16 33 chr5 40058167 40058289 -163027243 + GA-rich Low_complexity Low_complexity 1 120 0 24 0 0 0 chr5 40058534 40058558 -163026974 + AT_rich Low_complexity Low_complexity 1 24 0 477 0 0 0 chr5 40059174 40059227 -163026305 + (TG)n Simple_repeat Simple_repeat 1 53 0 192 268 0 0 chr5 40059542 40059583 -163025949 - L2 LINE L2 -9 3304 3264 312 200 0 0 chr5 40060265 40060330 -163025202 + GA-rich Low_complexity Low_complexity 3 67 0 281 287 75 11 chr5 40060504 40060615 -163024917 + MIR SINE MIR 39 156 -52 758 187 113 0 chr5 40061859 40062089 -163023443 - MER5C DNA MER1_type 0 324 69 1446 159 74 28 chr5 40062560 40062843 -163022689 + AluJo SINE Alu 1 296 -16 207 340 0 0 chr5 40063700 40063753 -163021779 - L2 LINE L2 -19 3294 3242 449 315 46 0 chr5 40064064 40064194 -163021338 + L2 LINE L2 3137 3272 0 653 245 66 31 chr5 40064556 40064674 -163020858 + MIR SINE MIR 59 188 -74 1037 177 23 156 chr5 40064674 40065104 -163020428 - MER93b LTR ERV1 0 373 1 653 245 66 31 chr5 40065104 40065181 -163020351 + MIR SINE MIR 188 261 -1 24 0 0 0 chr5 40066860 40066884 -163018648 + AT_rich Low_complexity Low_complexity 1 24 0 1437 193 108 68 chr5 40067081 40067563 -163017969 - MLT1D LTR MaLR -2 503 3 2856 164 66 63 chr5 40067604 40068329 -163017203 - LTR8A LTR ERV1 0 727 1 252 0 0 0 chr5 40068506 40068534 -163016998 + (TG)n Simple_repeat Simple_repeat 2 29 0 205 314 152 0 chr5 40069065 40069170 -163016362 - MIR SINE MIR -77 185 65 364 167 79 79 chr5 40069179 40069305 -163016227 + L1MC3 LINE L1 938 1063 -4982 * 649 176 32 27 chr5 40069284 40069491 -163016041 + L1MC3 LINE L1 1987 2294 -4425 10643 172 42 18 chr5 40069504 40071790 -163013742 + L1MC3 LINE L1 5865 8203 0 1422 238 13 18 chr5 40071786 40072172 -163013360 + L1MC3 LINE L1 5420 5803 -363 * 14996 173 43 7 chr5 40072235 40074118 -163011414 + L1PB1 LINE L1 2 1815 -5052 7696 25 1 0 chr5 40074118 40075173 -163010359 + L1PA3 LINE L1 5101 6155 0 14996 173 43 7 chr5 40075173 40075540 -163009992 + L1PB1 LINE L1 1815 2167 -4700 1737 174 34 7 chr5 40075540 40075833 -163009699 + AluJb SINE Alu 1 301 -11 14996 173 43 7 chr5 40075833 40076461 -163009071 + L1PB1 LINE L1 2167 2771 -4096 1945 167 0 3 chr5 40076461 40076772 -163008760 - AluSx SINE Alu -2 310 1 14996 173 43 7 chr5 40076772 40080522 -163005010 + L1PB1 LINE L1 2771 6867 0 388 306 46 46 chr5 40080522 40080741 -163004791 + L1MC3 LINE L1 5937 6155 -1630 2472 118 48 22 chr5 40081313 40081730 -163003802 + MSTC LTR MaLR 1 428 0 935 185 13 69 chr5 40081732 40081964 -163003568 - MER20 DNA MER1_type 0 219 1 345 338 62 25 chr5 40081991 40082151 -163003381 + MIR SINE MIR 37 202 -60 1946 199 44 3 chr5 40082604 40083060 -163002472 - MLT1F LTR MaLR -1 541 14 287 256 0 35 chr5 40083476 40083562 -163001970 + MSTB LTR MaLR 188 270 -156 1821 171 7 10 chr5 40083575 40083873 -163001659 - AluJb SINE Alu -15 297 1 2372 127 8 24 chr5 40084406 40084776 -163000756 - THE1B LTR MaLR 0 364 1 2108 149 91 13 chr5 40084963 40085360 -163000172 + MSTA LTR MaLR 1 428 0 9000 167 15 7 chr5 40085362 40086540 -162998992 + MSTA-int LTR MaLR 2 1197 -454 1680 161 69 28 chr5 40086540 40086900 -162998632 + THE1C LTR MaLR 1 375 0 9000 167 15 7 chr5 40086900 40087353 -162998179 + MSTA-int LTR MaLR 1197 1645 -6 2201 155 67 5 chr5 40087361 40087762 -162997770 + MSTA LTR MaLR 3 428 0 207 0 0 0 chr5 40088451 40088474 -162997058 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1379 211 14 28 chr5 40088477 40088762 -162996770 - AluJb SINE Alu -27 285 5 304 304 36 51 chr5 40089275 40089413 -162996119 + MIR SINE MIR 77 212 -50 247 278 124 0 chr5 40090222 40090319 -162995213 - MIR SINE MIR -68 194 86 1091 207 42 73 chr5 40090320 40090678 -162994854 + MLT1A2 LTR MaLR 1 347 -27 1441 192 22 53 chr5 40090937 40091255 -162994277 + AluJo SINE Alu 3 310 -2 23 33 0 0 chr5 40092367 40092397 -162993135 + AT_rich Low_complexity Low_complexity 1 30 0 1087 116 0 0 chr5 40092960 40093106 -162992426 - AluSg/x SINE Alu -21 291 146 1059 180 27 0 chr5 40093151 40093373 -162992159 + L1M3 LINE L1 5417 5644 -536 1416 139 132 0 chr5 40093375 40093648 -162991884 + MLT2C2 LTR ERVL 1 309 -155 446 173 45 83 chr5 40093649 40093782 -162991750 + MER65B LTR ERV1 1 128 -403 271 286 26 56 chr5 40093920 40094151 -162991381 + MER65A LTR ERV1 222 445 0 318 89 0 36 chr5 40094169 40094225 -162991307 + MLT2C1 LTR ERVL 296 349 -48 277 361 148 7 chr5 40094781 40094936 -162990596 + MIR3 SINE MIR 30 206 -2 191 394 53 11 chr5 40096116 40096210 -162989322 - L2 LINE L2 -32 3240 3143 188 318 47 83 chr5 40096581 40096773 -162988759 - MER5A DNA MER1_type -4 185 1 2316 84 3 0 chr5 40097252 40097549 -162987983 + AluSc SINE Alu 3 300 -9 186 292 10 73 chr5 40097671 40097767 -162987765 + L2 LINE L2 3180 3269 -44 442 269 26 17 chr5 40098186 40098342 -162987190 + MER5B DNA MER1_type 29 188 -1 372 224 0 0 chr5 40098517 40098584 -162986948 + MER91A DNA MER1_type 3 69 -71 260 287 116 22 chr5 40098720 40098901 -162986631 + L2 LINE L2 3116 3313 0 216 135 0 0 chr5 40098924 40098961 -162986571 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 267 258 177 38 chr5 40099069 40099278 -162986254 - MLT1L LTR MaLR -8 607 370 466 261 30 85 chr5 40100579 40100778 -162984754 - MIR SINE MIR -71 191 4 283 234 32 53 chr5 40100923 40101017 -162984515 - L2 LINE L2 -21 3251 3160 193 304 0 0 chr5 40101072 40101128 -162984404 - L3b LINE CR1 -346 1237 1182 1966 122 0 11 chr5 40101880 40102182 -162983350 - AluY SINE Alu 0 303 5 269 253 149 23 chr5 40102656 40102743 -162982789 + L2 LINE L2 3170 3267 -5 2417 80 0 0 chr5 40102874 40103174 -162982358 - AluY SINE Alu -11 300 1 3917 164 105 56 chr5 40103513 40104082 -162981450 - L1MC3 LINE L1 -14 7771 7130 2548 69 3 0 chr5 40104082 40104387 -162981145 - AluSp SINE Alu -7 306 1 3917 164 105 56 chr5 40104387 40104830 -162980702 - L1MC3 LINE L1 -655 7130 6710 198 299 45 0 chr5 40106552 40106619 -162978913 + MIR SINE MIR 78 147 -61 343 284 37 0 chr5 40108086 40108167 -162977365 + L2 LINE L2 3184 3267 -5 401 295 46 29 chr5 40108712 40108885 -162976647 + MER5B DNA MER1_type 1 176 -2 28 0 0 0 chr5 40109767 40109795 -162975737 + AT_rich Low_complexity Low_complexity 1 28 0 4218 36 0 0 chr5 40109825 40110329 -162975203 - L1PA4 LINE L1 0 6155 5652 306 277 24 12 chr5 40110464 40110547 -162974985 + MER5A DNA MER1_type 47 130 -59 2144 117 24 0 chr5 40110557 40110848 -162974684 + AluSx SINE Alu 9 306 -6 1606 189 99 35 chr5 40111110 40111544 -162973988 + MLT2B1 LTR ERVL 3 464 -56 195 184 0 0 chr5 40111562 40111600 -162973932 + (TA)n Simple_repeat Simple_repeat 1 38 0 282 115 19 0 chr5 40111638 40111690 -162973842 + MLT2B1 LTR ERVL 464 516 -4 28 29 0 0 chr5 40112461 40112496 -162973036 + AT_rich Low_complexity Low_complexity 1 35 0 1068 253 107 52 chr5 40113396 40113910 -162971622 - MLT1F LTR MaLR 0 542 1 4048 119 25 61 chr5 40114690 40115444 -162970088 + LTR8A LTR ERV1 1 727 0 524 298 75 3 chr5 40115470 40115669 -162969863 - MIR SINE MIR -5 257 43 327 366 46 6 chr5 40116623 40116798 -162968734 - MIR SINE MIR -70 192 11 353 185 206 0 chr5 40117648 40117740 -162967792 - L2 LINE L2 0 3313 3203 22 0 0 0 chr5 40118298 40118320 -162967212 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 40118416 40118452 -162967080 + AT_rich Low_complexity Low_complexity 1 36 0 204 350 126 30 chr5 40118556 40118953 -162966579 + L2 LINE L2 1690 2124 -1190 285 217 0 17 chr5 40119531 40119591 -162965941 + MLT1K LTR MaLR 184 242 -346 502 342 8 41 chr5 40121409 40121652 -162963880 + MIR SINE MIR 20 254 -8 22 0 0 0 chr5 40121975 40121997 -162963535 + AT_rich Low_complexity Low_complexity 1 22 0 287 240 27 0 chr5 40122027 40122102 -162963430 + (TG)n Simple_repeat Simple_repeat 2 78 0 4330 138 40 0 chr5 40122120 40122865 -162962667 - Tigger2 DNA MER2_type -1 2717 1943 2426 148 24 0 chr5 40122865 40123283 -162962249 - L1PBa LINE L1 -6434 429 2 10018 65 2 4 chr5 40123414 40124792 -162960740 - L1P LINE L1 -4148 1998 624 4149 69 17 27 chr5 40124792 40125489 -162960043 - L1P LINE L1 -5455 691 2 370 313 93 13 chr5 40126303 40126453 -162959079 - MER91A DNA MER1_type 0 196 35 619 205 33 0 chr5 40127244 40127395 -162958137 - L1ME3A LINE L1 -8 6162 6007 24 0 0 0 chr5 40127401 40127425 -162958107 + AT_rich Low_complexity Low_complexity 1 24 0 693 266 29 0 chr5 40127906 40128079 -162957453 + MER63A DNA MER1_type 33 210 0 2414 162 119 79 chr5 40128106 40128802 -162956730 - LTR8A LTR ERV1 0 727 4 194 337 22 11 chr5 40129233 40129322 -162956210 - L2 LINE L2 -5 3308 3219 5741 107 15 37 chr5 40129416 40130529 -162955003 + L1PB1 LINE L1 5057 6147 -4 978 216 5 0 chr5 40130774 40130968 -162954564 - MLT1B LTR MaLR 0 390 196 304 238 125 0 chr5 40130957 40131037 -162954495 - MLT1B LTR MaLR -298 92 3 * 1983 202 87 34 chr5 40131037 40131617 -162953915 - MLT1E2 LTR MaLR -18 608 1 379 258 93 41 chr5 40131642 40131733 -162953799 - L1M4 LINE L1 -2040 4106 4021 393 39 0 0 chr5 40131733 40131784 -162953748 + (TG)n Simple_repeat Simple_repeat 2 52 0 379 258 93 41 chr5 40131784 40131886 -162953646 - L1M4 LINE L1 -2125 4021 3903 213 65 0 0 chr5 40132221 40132252 -162953280 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 26307 34 0 0 chr5 40132638 40136785 -162948747 + L1PA3 LINE L1 2008 6155 0 9786 149 24 5 chr5 40136800 40138538 -162946994 - Tigger2 DNA MER2_type -946 1772 1 248 313 35 26 chr5 40138997 40139112 -162946420 + MER5A DNA MER1_type 4 119 -70 392 325 36 40 chr5 40139743 40139995 -162945537 + L1M4 LINE L1 4699 4949 -1197 331 300 20 36 chr5 40140017 40140260 -162945272 + L1M3e LINE L1 -718 565 -5738 2365 263 54 71 chr5 40140559 40140820 -162944712 + L1M3e LINE L1 818 1082 -5300 2112 115 3 30 chr5 40140820 40141124 -162944408 + AluSg SINE Alu 2 297 -13 2365 263 54 71 chr5 40141124 40142084 -162943448 + L1M3e LINE L1 1082 1851 -4531 2222 133 0 0 chr5 40142084 40142392 -162943140 + AluSx SINE Alu 1 308 -4 2365 263 54 71 chr5 40142392 40143442 -162942090 + L1M3e LINE L1 1851 2917 -3465 5911 93 16 6 chr5 40143444 40144193 -162941339 - L1PA13 LINE L1 0 6163 5423 5327 117 4 10 chr5 40144193 40144978 -162940554 + LTR17 LTR ERV1 1 780 0 5911 93 16 6 chr5 40144978 40145719 -162939813 - L1PA13 LINE L1 -740 5423 4656 210 37 0 0 chr5 40145719 40145746 -162939786 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5911 93 16 6 chr5 40145746 40146078 -162939454 - L1PA13 LINE L1 -1507 4656 4329 659 181 30 121 chr5 40146124 40146356 -162939176 + MLT1A2 LTR MaLR 1 211 -163 2289 191 47 8 chr5 40146382 40146510 -162939022 + L1MA9 LINE L1 5168 5290 -1022 195 42 0 0 chr5 40146510 40146534 -162938998 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2289 191 47 8 chr5 40146534 40146998 -162938534 + L1MA9 LINE L1 5290 5779 -533 342 0 0 0 chr5 40147001 40147039 -162938493 + (CA)n Simple_repeat Simple_repeat 2 39 0 267 308 0 11 chr5 40147088 40147179 -162938353 - MLT1A2 LTR MaLR -148 226 137 23 0 0 0 chr5 40147192 40147215 -162938317 + AT_rich Low_complexity Low_complexity 1 23 0 2064 190 38 8 chr5 40147225 40147694 -162937838 + L1MA9 LINE L1 5788 6270 -42 760 185 19 0 chr5 40147775 40147932 -162937600 + L1MB1 LINE L1 5738 5897 -271 3441 33 9 0 chr5 40147936 40148493 -162937039 - L1P2 LINE L1 -647 5508 4949 4092 31 0 0 chr5 40148493 40148978 -162936554 + L1PA4 LINE L1 5660 6144 -11 348 103 17 0 chr5 40148989 40149047 -162936485 + L1M3 LINE L1 5572 5630 -704 28 48 0 0 chr5 40149047 40149089 -162936443 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5 40149132 40149164 -162936368 + AT_rich Low_complexity Low_complexity 1 32 0 5099 94 7 1 chr5 40149288 40150008 -162935524 + L1PA14 LINE L1 5438 6161 0 997 274 82 3 chr5 40150607 40150947 -162934585 + MLT1G LTR MaLR 10 376 -214 263 83 0 42 chr5 40150936 40150984 -162934548 - LTR16A1 LTR ERVL -346 111 66 * 1730 153 68 41 chr5 40151005 40151370 -162934162 - THE1C LTR MaLR 0 375 1 2371 26 16 20 chr5 40151381 40151687 -162933845 - AluY SINE Alu -6 305 1 3891 160 28 4 chr5 40151842 40152529 -162933003 + MER50 LTR ERV1 1 703 -31 1906 169 21 21 chr5 40153090 40153427 -162932105 + MER1B DNA MER1_type 1 337 0 300 296 66 13 chr5 40155441 40155593 -162929939 - L1 LINE L1 -1881 4265 4106 471 183 8 75 chr5 40155597 40155717 -162929815 - MER20 DNA MER1_type -15 204 93 908 192 6 33 chr5 40156455 40156637 -162928895 - MER45A DNA AcHobo 0 178 2 243 0 0 0 chr5 40157071 40157098 -162928434 + (CA)n Simple_repeat Simple_repeat 1 27 0 459 377 75 22 chr5 40157186 40157557 -162927975 + L3 LINE CR1 501 891 -686 854 277 96 27 chr5 40157732 40158182 -162927350 + L1ME3A LINE L1 5478 5955 -215 2028 129 17 3 chr5 40158281 40158583 -162926949 + AluSx SINE Alu 1 306 -6 218 299 15 15 chr5 40158820 40158887 -162926645 + L3 LINE CR1 1209 1275 -302 2381 72 0 3 chr5 40159407 40159697 -162925835 - AluY SINE Alu -22 289 1 207 0 0 0 chr5 40159890 40159913 -162925619 + (TG)n Simple_repeat Simple_repeat 2 24 0 647 255 165 46 chr5 40160559 40160904 -162924628 + MLT1F1 LTR MaLR 29 419 -148 5362 122 73 75 chr5 40160910 40162455 -162923077 + pTR5 LTR ERV1 743 2438 0 603 248 14 0 chr5 40162460 40162605 -162922927 + MLT1F1 LTR MaLR 421 567 0 397 198 12 12 chr5 40162643 40162724 -162922808 - Tigger7 DNA MER2_type 0 2487 2407 2082 211 15 0 chr5 40162741 40163139 -162922393 - Tigger7 DNA MER2_type -326 407 4 2042 234 30 0 chr5 40163215 40163684 -162921848 + MLT1D LTR MaLR 21 503 -2 1785 171 10 26 chr5 40163933 40164237 -162921295 + AluJb SINE Alu 6 304 -8 273 400 9 0 chr5 40164265 40164380 -162921152 + L2 LINE L2 3148 3263 -9 2048 131 0 28 chr5 40164654 40164974 -162920558 - AluSq SINE Alu -2 311 1 2732 138 7 2 chr5 40165240 40165666 -162919866 - MSTA LTR MaLR 0 428 1 218 304 0 0 chr5 40166387 40166479 -162919053 + (TA)n Simple_repeat Simple_repeat 1 92 0 405 309 43 16 chr5 40166493 40166681 -162918851 + HAL1b LINE L1 399 591 -757 399 300 104 63 chr5 40166873 40166952 -162918580 + L1ME4a LINE L1 5624 5698 -423 2308 120 0 0 chr5 40166952 40167260 -162918272 + AluSx SINE Alu 1 308 -4 399 300 104 63 chr5 40167260 40167643 -162917889 + L1ME4a LINE L1 5698 6105 -16 2016 124 135 36 chr5 40167698 40168084 -162917448 + MSTA LTR MaLR 5 428 0 235 280 15 129 chr5 40168567 40168699 -162916833 - L2 LINE L2 -33 3280 3164 26 30 0 0 chr5 40169890 40169923 -162915609 + AT_rich Low_complexity Low_complexity 1 33 0 362 339 87 23 chr5 40169935 40170153 -162915379 + MIR SINE MIR 31 262 0 189 171 0 0 chr5 40170463 40170498 -162915034 + (CA)n Simple_repeat Simple_repeat 2 36 0 269 284 25 12 chr5 40170645 40170726 -162914806 + MER5B DNA MER1_type 20 101 -77 716 336 4 0 chr5 40171961 40172205 -162913327 - MIR SINE MIR -16 246 2 916 235 22 38 chr5 40172260 40172527 -162913005 + MLT1D LTR MaLR 7 270 -197 1623 202 36 50 chr5 40173589 40174030 -162911502 + MLT1C LTR MaLR 1 435 -32 188 298 26 88 chr5 40174327 40174441 -162911091 + L2 LINE L2 2992 3098 -174 1524 166 9 67 chr5 40174584 40174928 -162910604 - MLT1D LTR MaLR -1 504 181 219 375 83 28 chr5 40175022 40175417 -162910115 + L2 LINE L2 2469 2885 -429 187 308 10 67 chr5 40175476 40175580 -162909952 + L2 LINE L2 3216 3313 0 1636 197 0 0 chr5 40176130 40176434 -162909098 - AluJb SINE Alu 0 312 9 267 271 16 49 chr5 40176546 40176668 -162908864 + HAL1b LINE L1 773 890 -458 293 284 43 14 chr5 40176787 40176928 -162908604 + HAL1 LINE L1 2225 2369 -138 1072 271 95 24 chr5 40177266 40177686 -162907846 + LTR16A1 LTR ERVL 8 457 0 327 49 0 0 chr5 40177770 40177811 -162907721 + (TG)n Simple_repeat Simple_repeat 1 41 0 332 222 0 44 chr5 40178000 40178090 -162907442 - L1MC4 LINE L1 -1343 6699 6614 237 247 13 0 chr5 40178095 40178172 -162907360 + (TA)n Simple_repeat Simple_repeat 2 79 0 26 0 0 0 chr5 40178975 40179001 -162906531 + AT_rich Low_complexity Low_complexity 1 26 0 329 333 82 13 chr5 40179371 40179530 -162906002 + MIR3 SINE MIR 34 203 -5 661 286 82 47 chr5 40179809 40180127 -162905405 - MLT1L LTR MaLR -189 426 98 298 261 33 11 chr5 40180200 40180292 -162905240 - MIR SINE MIR -75 133 40 1572 237 2 20 chr5 40180880 40181318 -162904214 - L1P LINE L1 -993 5153 4724 23 0 0 0 chr5 40181586 40181609 -162903923 + AT_rich Low_complexity Low_complexity 1 23 0 1108 162 21 0 chr5 40182197 40182388 -162903144 + L1PB1 LINE L1 5956 6150 -1 21 0 0 0 chr5 40182614 40182635 -162902897 + AT_rich Low_complexity Low_complexity 1 21 0 718 300 112 30 chr5 40183452 40183942 -162901590 - MLT1F LTR MaLR -8 534 22 432 279 211 7 chr5 40184790 40184937 -162900595 - MER5A DNA MER1_type 0 189 13 23 0 0 0 chr5 40185286 40185309 -162900223 + AT_rich Low_complexity Low_complexity 1 23 0 4890 277 45 49 chr5 40185315 40187534 -162897998 + L1M3b LINE L1 12 2238 -4112 2325 145 6 8 chr5 40187534 40187899 -162897633 - THE1B LTR MaLR 0 364 1 10901 111 21 0 chr5 40187899 40189447 -162896085 - THE1B-int LTR MaLR 0 1580 1 2262 152 5 19 chr5 40189447 40189816 -162895716 - THE1B LTR MaLR 0 364 1 4890 277 45 49 chr5 40189816 40190328 -162895204 + L1M3b LINE L1 2235 2426 -3924 240 204 0 20 chr5 40190328 40190377 -162895155 - Alu SINE Alu -72 61 14 682 264 60 27 chr5 40190951 40191237 -162894295 + L1M1 LINE L1 5491 5787 -395 36 23 0 0 chr5 40191240 40191283 -162894249 + AT_rich Low_complexity Low_complexity 1 43 0 9309 106 2 1 chr5 40192146 40193405 -162892127 + THE1B-int LTR MaLR 320 1580 0 2330 147 3 14 chr5 40193405 40193773 -162891759 + THE1B LTR MaLR 1 364 0 366 286 220 16 chr5 40194349 40194531 -162891001 + L2 LINE L2 2856 3074 -239 1040 206 63 120 chr5 40194544 40194927 -162890605 + MLT1A1 LTR MaLR 5 365 0 229 285 131 15 chr5 40194940 40195077 -162890455 + L2 LINE L2 3091 3243 -70 1720 243 56 61 chr5 40195152 40195744 -162889788 - MER92B LTR ERV1 -47 589 1 352 231 0 0 chr5 40195745 40195810 -162889722 + L2 LINE L2 3249 3313 0 181 286 20 0 chr5 40195943 40195992 -162889540 - MIR SINE MIR -19 243 194 198 225 0 0 chr5 40196565 40196605 -162888927 - L2 LINE L2 -17 3255 3216 42280 38 23 1 chr5 40197678 40203699 -162881833 - L1PA3 LINE L1 0 6155 3 361 22 0 0 chr5 40203750 40203795 -162881737 + MADE1 DNA Mariner 3 47 -33 642 209 115 95 chr5 40203820 40204073 -162881459 - MIR SINE MIR -3 259 2 1861 157 3 0 chr5 40204280 40204566 -162880966 - AluJb SINE Alu -25 287 1 2011 179 92 9 chr5 40204832 40205279 -162880253 - Charlie1b DNA MER1_type -4 519 36 30 0 0 0 chr5 40205817 40205847 -162879685 + AT_rich Low_complexity Low_complexity 1 30 0 182 393 89 0 chr5 40205984 40206096 -162879436 - MIR3 SINE MIR -6 202 81 23 33 0 0 chr5 40206265 40206295 -162879237 + AT_rich Low_complexity Low_complexity 1 30 0 502 234 81 5 chr5 40206300 40206509 -162879023 - L1M4 LINE L1 -3044 3102 2878 201 74 0 0 chr5 40206511 40206538 -162878994 + (TG)n Simple_repeat Simple_repeat 1 27 0 5496 194 40 29 chr5 40206634 40206915 -162878617 - L1MC1 LINE L1 -179 6154 5878 2201 112 3 7 chr5 40206915 40207242 -162878290 - AluSq SINE Alu 0 313 1 5496 194 40 29 chr5 40207242 40209227 -162876305 - L1MC1 LINE L1 -455 5878 3859 2519 72 0 0 chr5 40209227 40209532 -162876000 - AluY SINE Alu -6 305 1 5496 194 40 29 chr5 40209532 40209707 -162875825 - L1MC1 LINE L1 -2474 3859 3687 24 0 0 0 chr5 40209707 40209731 -162875801 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5 40209814 40209846 -162875686 + AT_rich Low_complexity Low_complexity 1 32 0 240 419 73 0 chr5 40209897 40210021 -162875511 - MER91A DNA MER1_type -40 156 24 238 284 32 21 chr5 40210031 40210126 -162875406 - L1M4 LINE L1 -3378 2768 2673 22 0 0 0 chr5 40210184 40210206 -162875326 + AT_rich Low_complexity Low_complexity 1 22 0 300 305 30 6 chr5 40210313 40210477 -162875055 + L1M4 LINE L1 2304 2471 -3675 2139 122 20 29 chr5 40210525 40210869 -162874663 - THE1B LTR MaLR -2 362 22 2108 99 0 0 chr5 40210877 40211159 -162874373 - THE1B-int LTR MaLR -1 1579 1298 3517 82 3 0 chr5 40211173 40211647 -162873885 - THE1B-int LTR MaLR -1112 468 1 2032 126 48 25 chr5 40211647 40212003 -162873529 - THE1B LTR MaLR 0 364 1 653 293 71 36 chr5 40212307 40212560 -162872972 - MIR SINE MIR 0 262 1 1593 173 134 3 chr5 40212649 40212956 -162872576 + MER7A DNA MER2_type 2 346 0 287 405 57 36 chr5 40213296 40213819 -162871713 - L2 LINE L2 -337 2977 2444 727 170 0 0 chr5 40215409 40215515 -162870017 + FRAM SINE Alu 41 146 -30 194 54 0 54 chr5 40215801 40215838 -162869694 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 582 228 23 19 chr5 40215900 40216072 -162869460 + L1MCa LINE L1 1 154 -5891 336 234 0 0 chr5 40216199 40216263 -162869269 + L2 LINE L2 3209 3272 0 744 66 9 0 chr5 40216951 40217057 -162868475 - L1MA8 LINE L1 -4 6287 6181 447 241 0 0 chr5 40217192 40217279 -162868253 - MIR3 SINE MIR -21 187 101 25 51 0 0 chr5 40218128 40218167 -162867365 + AT_rich Low_complexity Low_complexity 1 39 0 206 236 0 14 chr5 40218598 40218670 -162866862 + CT-rich Low_complexity Low_complexity 2 72 0 3077 190 27 2 chr5 40219288 40219877 -162865655 + MER6A DNA MER2_type 1 604 -1 7547 191 91 48 chr5 40222683 40225003 -162860529 - Tigger1 DNA MER2_type 0 2418 1 5109 33 2 0 chr5 40225343 40225945 -162859587 - L1PA3 LINE L1 -3 6152 5550 1685 275 72 13 chr5 40226359 40226778 -162858754 - L1MEc LINE L1 -2697 3518 3125 2278 117 16 42 chr5 40226778 40227163 -162858369 - THE1C LTR MaLR 0 375 1 1685 275 72 13 chr5 40227163 40227605 -162857927 - L1MEc LINE L1 -3090 3125 2606 16527 185 33 31 chr5 40227641 40228922 -162856610 + L1PB2 LINE L1 3 1280 -5587 2111 120 79 15 chr5 40228922 40229264 -162856268 + THE1B LTR MaLR 1 364 0 16527 185 33 31 chr5 40229264 40231551 -162853981 + L1PB2 LINE L1 1280 3561 -3306 2011 142 10 3 chr5 40231551 40231862 -162853670 + AluSq SINE Alu 1 313 0 16527 185 33 31 chr5 40231862 40235177 -162850355 + L1PB2 LINE L1 3561 6864 -3 37 0 0 0 chr5 40235187 40235224 -162850308 + AT_rich Low_complexity Low_complexity 1 37 0 407 213 95 123 chr5 40235224 40235704 -162849828 - L1MEc LINE L1 -3636 2579 2153 1314 179 4 34 chr5 40235779 40236013 -162849519 + THE1B LTR MaLR 1 227 -137 1283 267 73 68 chr5 40236013 40237164 -162848368 - L1MEc LINE L1 -4579 1817 661 241 329 82 7 chr5 40237460 40237606 -162847926 - L1MEc LINE L1 -6027 369 213 2141 131 0 0 chr5 40237741 40238046 -162847486 + AluSx SINE Alu 1 305 -7 191 288 45 0 chr5 40238224 40238290 -162847242 - L2 LINE L2 -18 3254 3186 248 195 12 61 chr5 40238467 40238549 -162846983 + MER112 DNA MER1_type 1 78 -182 234 0 0 0 chr5 40238557 40238583 -162846949 + (CA)n Simple_repeat Simple_repeat 1 26 0 2943 172 111 25 chr5 40238878 40239669 -162845863 + MER21A LTR ERV1 1 891 -40 35 0 0 0 chr5 40239673 40239708 -162845824 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 40239914 40239942 -162845590 + AT_rich Low_complexity Low_complexity 1 28 0 2208 110 3 0 chr5 40240124 40240424 -162845108 + AluSc SINE Alu 1 301 -8 1743 184 54 16 chr5 40241852 40242222 -162843310 - MER31B LTR ERV1 0 466 83 207 280 67 27 chr5 40242354 40242429 -162843103 - L2 LINE L2 -7 3265 3188 12060 158 14 56 chr5 40242576 40243537 -162841995 + L1MA4A LINE L1 2660 3660 -2643 2869 3 0 0 chr5 40243537 40243845 -162841687 + AluY SINE Alu 1 308 -3 12060 158 14 56 chr5 40243845 40244595 -162840937 + L1MA4A LINE L1 3660 4440 -1863 696 178 8 0 chr5 40244595 40244713 -162840819 + FLAM_C SINE Alu 1 119 -24 207 100 0 0 chr5 40244714 40244744 -162840788 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 12060 158 14 56 chr5 40244744 40246632 -162838900 + L1MA4A LINE L1 4439 6212 -91 633 193 12 6 chr5 40246632 40246803 -162838729 + CT-rich Low_complexity Low_complexity 2 173 0 1159 212 52 10 chr5 40246805 40247093 -162838439 - AluSx SINE Alu -1 301 2 226 229 33 16 chr5 40247964 40248025 -162837507 + MIR SINE MIR 92 153 -109 2170 86 14 0 chr5 40248855 40249174 -162836358 + AluSg SINE Alu 1 323 0 395 244 126 8 chr5 40249829 40249956 -162835576 + MIR SINE MIR 91 232 -30 363 310 10 35 chr5 40249963 40250160 -162835372 + L1ME LINE L1 5628 5819 -302 651 254 88 20 chr5 40250721 40250925 -162834607 - MIR SINE MIR -12 250 34 22 35 0 0 chr5 40251534 40251563 -162833969 + AT_rich Low_complexity Low_complexity 1 29 0 382 358 62 11 chr5 40251884 40252063 -162833469 - MIR3 SINE MIR -2 206 19 873 187 81 15 chr5 40252449 40252647 -162832885 - MER90 LTR ERV1 -1 613 403 483 226 39 0 chr5 40252635 40252737 -162832795 - MER90 LTR ERV1 -477 137 32 * 216 0 0 0 chr5 40252751 40252775 -162832757 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 827 218 83 9 chr5 40252897 40253113 -162832419 + MER46C DNA MER2_type 3 234 -104 679 247 102 25 chr5 40253290 40253525 -162832007 - MIR SINE MIR 0 262 10 290 305 0 0 chr5 40253999 40254081 -162831451 + CT-rich Low_complexity Low_complexity 2 83 0 2243 102 3 0 chr5 40254096 40254389 -162831143 - AluSg SINE Alu -16 294 1 208 307 0 0 chr5 40254438 40254513 -162831019 + T-rich Low_complexity Low_complexity 1 75 0 31 26 0 0 chr5 40256516 40256554 -162828978 + AT_rich Low_complexity Low_complexity 1 38 0 1824 105 36 69 chr5 40256774 40257080 -162828452 + AluSg SINE Alu 1 296 -14 603 284 21 64 chr5 40257091 40257327 -162828205 - MIR SINE MIR -15 247 22 1833 181 0 0 chr5 40258034 40258344 -162827188 - AluJo SINE Alu 0 312 3 2328 66 23 16 chr5 40258606 40258911 -162826621 - AluY SINE Alu -4 307 1 1389 161 177 27 chr5 40259040 40259413 -162826119 - L1MB8 LINE L1 -1 6177 5749 322 242 0 0 chr5 40259416 40259478 -162826054 + MER2 DNA MER2_type 1 62 -283 2665 102 3 8 chr5 40259481 40259853 -162825679 - THE1B-int LTR MaLR -297 1283 914 1103 103 5 88 chr5 40259847 40259889 -162825643 - THE1B-int LTR MaLR -1182 398 354 * 2414 53 0 0 chr5 40259889 40260171 -162825361 + AluY SINE Alu 21 302 -9 1103 103 5 88 chr5 40260171 40260322 -162825210 - THE1B-int LTR MaLR -1226 354 221 1990 192 51 13 chr5 40260328 40260468 -162825064 + L1M4 LINE L1 5263 5396 -782 2280 118 25 25 chr5 40260468 40260832 -162824700 - THE1B LTR MaLR 0 364 1 1990 192 51 13 chr5 40260832 40261159 -162824373 + L1M4 LINE L1 5396 5748 -430 737 240 71 31 chr5 40261159 40261413 -162824119 - MER2 DNA MER2_type -1 344 81 1678 77 0 5 chr5 40261413 40261635 -162823897 - THE1C-int LTR MaLR -1359 221 1 2302 151 3 11 chr5 40261635 40262013 -162823519 - THE1C LTR MaLR 0 375 1 3287 223 99 38 chr5 40262014 40262418 -162823114 - L1M4 LINE L1 -2986 3658 3280 355 164 16 0 chr5 40262418 40262479 -162823053 - U7 snRNA snRNA -1 62 1 3287 223 99 38 chr5 40262479 40264141 -162821391 - L1M4 LINE L1 -3364 3280 1464 1850 200 55 14 chr5 40264141 40264556 -162820976 - L1MC3 LINE L1 -7 7778 7347 * 4648 237 63 45 chr5 40264549 40264812 -162820720 - L1M4 LINE L1 -5054 1488 1231 3396 131 6 0 chr5 40264812 40265323 -162820209 + MER75 DNA T2_type 1 514 0 4648 237 63 45 chr5 40265323 40266147 -162819385 - L1M4 LINE L1 -5311 1231 366 2305 116 0 3 chr5 40266147 40266458 -162819074 + AluSx SINE Alu 1 310 -2 4648 237 63 45 chr5 40266458 40266820 -162818712 - L1M4 LINE L1 -6176 366 12 348 347 49 0 chr5 40267500 40267644 -162817888 + L2 LINE L2 3122 3272 0 234 256 49 37 chr5 40268115 40268197 -162817335 + L2 LINE L2 3190 3272 0 220 227 210 25 chr5 40268196 40268315 -162817217 + L2 LINE L2 3173 3313 0 * 314 320 62 39 chr5 40268511 40268639 -162816893 - MER91A DNA MER1_type -25 171 41 26 0 0 0 chr5 40270118 40270144 -162815388 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5 40271273 40271306 -162814226 + AT_rich Low_complexity Low_complexity 1 33 0 645 162 8 0 chr5 40271381 40271498 -162814034 - FLAM_A SINE Alu -5 137 20 190 322 0 17 chr5 40272011 40272070 -162813462 + L2 LINE L2 3213 3270 -2 25 0 0 0 chr5 40272205 40272230 -162813302 + AT_rich Low_complexity Low_complexity 1 25 0 259 313 0 17 chr5 40272381 40272496 -162813036 + MIR SINE MIR 54 166 -96 382 224 172 0 chr5 40272681 40272797 -162812735 - L2 LINE L2 0 3313 3178 962 259 0 26 chr5 40273162 40273390 -162812142 - MIR SINE MIR 0 262 41 24 0 0 0 chr5 40273496 40273520 -162812012 + AT_rich Low_complexity Low_complexity 1 24 0 242 297 0 20 chr5 40274795 40274896 -162810636 + MIR SINE MIR 71 169 -93 1169 149 102 81 chr5 40276579 40276901 -162808631 - MSTB1 LTR MaLR 0 432 104 * 1241 164 41 0 chr5 40276895 40277115 -162808417 - MSTB1 LTR MaLR -203 229 1 513 269 125 12 chr5 40277467 40277673 -162807859 - MIR SINE MIR -2 260 28 1000 153 8 2 chr5 40277830 40278080 -162807452 - AluJb SINE Alu -1 311 1 2005 116 0 0 chr5 40278221 40278498 -162807034 + AluSx SINE Alu 36 312 0 22 0 0 0 chr5 40278660 40278682 -162806850 + AT_rich Low_complexity Low_complexity 1 22 0 208 302 47 35 chr5 40279226 40279312 -162806220 + L2 LINE L2 3183 3269 -3 1243 279 19 65 chr5 40280287 40280750 -162804782 - MLT1J LTR MaLR -34 477 36 2481 68 0 7 chr5 40283119 40283427 -162802105 + AluSg SINE Alu 1 306 -4 2295 84 7 3 chr5 40283432 40283728 -162801804 + AluSq SINE Alu 1 297 -16 22 56 0 0 chr5 40283953 40283989 -162801543 + AT_rich Low_complexity Low_complexity 1 36 0 448 113 134 0 chr5 40284369 40284466 -162801066 + L1MB4 LINE L1 6071 6180 0 873 194 50 0 chr5 40284599 40284779 -162800753 + MER5A DNA MER1_type 1 189 0 280 321 46 9 chr5 40284784 40284893 -162800639 - L2 LINE L2 -1 3312 3200 767 304 133 33 chr5 40285206 40285656 -162799876 - L2 LINE L2 -482 2832 2338 285 330 111 24 chr5 40286802 40287181 -162798351 - L2 LINE L2 -594 2720 2309 374 274 114 51 chr5 40287550 40287725 -162797807 - MIR3 SINE MIR -15 193 8 641 176 20 46 chr5 40288039 40288192 -162797340 - L1PA16 LINE L1 -3 6163 6015 705 278 139 20 chr5 40288864 40289260 -162796272 - HAL1b LINE L1 -613 735 293 683 274 28 39 chr5 40289277 40289532 -162796000 - L1MC4 LINE L1 -1070 6972 6721 595 181 13 0 chr5 40290746 40290901 -162794631 + (TA)n Simple_repeat Simple_repeat 1 157 0 6493 86 23 13 chr5 40290925 40292374 -162793158 - L1PA13 LINE L1 -4 6159 4699 21 71 0 0 chr5 40292491 40292533 -162792999 + AT_rich Low_complexity Low_complexity 1 42 0 408 345 105 61 chr5 40292578 40293167 -162792365 + L2 LINE L2 2040 2654 -660 204 285 70 51 chr5 40293609 40293767 -162791765 + L2 LINE L2 3077 3237 -76 798 171 0 13 chr5 40293792 40293907 -162791625 + GA-rich Low_complexity Low_complexity 1 116 -441 1856 126 41 4 chr5 40293907 40294177 -162791355 + AluSg SINE Alu 1 280 -30 798 171 0 13 chr5 40294177 40294357 -162791175 + GA-rich Low_complexity Low_complexity 116 557 0 530 299 87 13 chr5 40294528 40294759 -162790773 - MIR SINE MIR 0 262 15 329 125 31 0 chr5 40294960 40295024 -162790508 + GA-rich Low_complexity Low_complexity 4 69 0 378 191 83 0 chr5 40295578 40295662 -162789870 - MIR SINE MIR -101 161 71 933 198 29 0 chr5 40297003 40297210 -162788322 + L1MD1 LINE L1 4970 5182 -964 * 4960 172 37 6 chr5 40297201 40298218 -162787314 + L1MD1 LINE L1 5120 6174 -68 1104 125 40 20 chr5 40298585 40298785 -162786747 - L1MB4 LINE L1 -151 6029 5826 293 398 85 31 chr5 40298842 40299159 -162786373 + L2 LINE L2 2927 3260 -12 384 329 50 21 chr5 40299236 40299376 -162786156 + MIR3 SINE MIR 38 181 -27 234 369 7 35 chr5 40300284 40300425 -162785107 + MIR SINE MIR 31 167 -95 933 253 83 29 chr5 40303577 40303849 -162781683 - MLT1A2 LTR MaLR 0 467 143 2312 49 0 0 chr5 40303849 40304136 -162781396 - L1PA4 LINE L1 -8 6147 5861 933 253 83 29 chr5 40304136 40304288 -162781244 - MLT1A2 LTR MaLR -324 143 1 1108 63 142 98 chr5 40304994 40305199 -162780333 - AluY SINE Alu -13 298 85 2202 104 0 0 chr5 40305919 40306208 -162779324 + AluSx SINE Alu 9 297 -15 332 248 173 38 chr5 40309980 40310113 -162775419 - L2 LINE L2 -4 3268 3118 447 233 64 121 chr5 40311024 40311273 -162774259 - MER112 DNA MER1_type -24 236 2 2098 141 0 0 chr5 40312807 40313111 -162772421 + AluSx SINE Alu 1 304 -8 29 28 0 0 chr5 40313516 40313552 -162771980 + AT_rich Low_complexity Low_complexity 1 36 0 252 366 40 0 chr5 40314098 40314199 -162771333 - MIR SINE MIR -59 203 99 457 317 93 39 chr5 40316129 40316324 -162769208 - L1MC/D LINE L1 -748 5398 5215 189 107 0 0 chr5 40316324 40316352 -162769180 + (TA)n Simple_repeat Simple_repeat 2 29 0 457 317 93 39 chr5 40316352 40316793 -162768739 - L1MC/D LINE L1 -931 5215 4783 420 57 0 0 chr5 40316932 40316985 -162768547 - Alu SINE Alu -22 290 238 1091 75 0 0 chr5 40316986 40317119 -162768413 - AluSg SINE Alu -177 133 1 289 274 74 93 chr5 40317428 40317698 -162767834 - LTR67 LTR ERVL -21 536 272 335 301 71 55 chr5 40317700 40318079 -162767453 - L1MC/D LINE L1 -1975 4171 3787 585 318 69 8 chr5 40318088 40318333 -162767199 + MIR SINE MIR 2 261 -1 477 0 0 0 chr5 40519970 40520023 -162565509 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 237 276 0 53 chr5 40522400 40522476 -162563056 - MIR SINE MIR -109 153 82 30 0 0 0 chr5 40523347 40523377 -162562155 + AT_rich Low_complexity Low_complexity 1 30 0 215 184 41 20 chr5 40523475 40523524 -162562008 + GA-rich Low_complexity Low_complexity 4 53 0 29 0 0 0 chr5 40523527 40523556 -162561976 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 40525269 40525298 -162560234 + AT_rich Low_complexity Low_complexity 1 29 0 193 304 76 0 chr5 40525541 40525633 -162559899 - MIR SINE MIR 0 262 164 717 199 6 60 chr5 40525692 40525858 -162559674 + MIR SINE MIR 84 240 -22 2378 74 0 3 chr5 40526512 40526808 -162558724 - AluY SINE Alu -14 297 3 209 175 0 35 chr5 40527879 40527936 -162557596 + T-rich Low_complexity Low_complexity 6 60 0 1292 165 47 88 chr5 40527938 40528235 -162557297 - AluJb SINE Alu -23 289 5 2236 107 0 3 chr5 40528760 40529060 -162556472 + AluSx SINE Alu 1 299 -13 571 258 17 88 chr5 40529906 40530146 -162555386 + MIR SINE MIR 26 248 -14 22 0 0 0 chr5 40532839 40532861 -162552671 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 40534443 40534473 -162551059 + AT_rich Low_complexity Low_complexity 1 30 0 209 228 105 18 chr5 40534969 40535026 -162550506 + L2 LINE L2 3210 3271 -1 375 212 0 0 chr5 40536067 40536133 -162549399 + MER5B DNA MER1_type 1 66 -112 456 19 0 0 chr5 40536172 40536225 -162549307 + (CA)n Simple_repeat Simple_repeat 2 54 0 255 346 29 29 chr5 40536449 40536657 -162548875 - L2 LINE L2 -1377 1937 1730 534 220 77 6 chr5 40537827 40537995 -162547537 - Charlie7 DNA MER1_type -1 2611 2432 332 185 98 11 chr5 40537981 40538073 -162547459 - Charlie7 DNA MER1_type -2507 105 6 * 358 363 44 11 chr5 40538409 40538591 -162546941 + MIR3 SINE MIR 11 198 -10 2391 43 7 20 chr5 40538782 40539082 -162546450 + AluY SINE Alu 1 296 -15 318 26 0 0 chr5 40539776 40539815 -162545717 + (TG)n Simple_repeat Simple_repeat 1 39 0 273 319 187 18 chr5 40539921 40540087 -162545445 + MIR SINE MIR 48 241 -21 219 277 53 0 chr5 40540269 40540363 -162545169 + MIR SINE MIR 33 131 -77 * 1701 270 98 11 chr5 40540333 40540954 -162544578 + L2 LINE L2 2363 3033 -239 1852 133 0 11 chr5 40541078 40541349 -162544183 - AluSq SINE Alu -45 268 1 353 252 29 29 chr5 40541516 40541619 -162543913 + MER5A DNA MER1_type 4 106 -83 2093 137 10 0 chr5 40543686 40543979 -162541553 + AluSx SINE Alu 1 296 -16 213 224 112 121 chr5 40544256 40544372 -162541160 + L2 LINE L2 3183 3297 -16 251 324 44 29 chr5 40544599 40544735 -162540797 + L2 LINE L2 2917 3054 -218 935 289 154 14 chr5 40544814 40545412 -162540120 - L2 LINE L2 0 3313 2634 186 209 0 0 chr5 40548067 40548110 -162537422 + (CATA)n Simple_repeat Simple_repeat 4 46 0 871 254 119 44 chr5 40548118 40548570 -162536962 - L1ME4a LINE L1 -52 6069 5584 44 0 0 0 chr5 40550631 40550675 -162534857 + AT_rich Low_complexity Low_complexity 1 44 0 3717 54 0 9 chr5 40550702 40551144 -162534388 - L1PA5 LINE L1 0 6154 5717 330 250 0 48 chr5 40551158 40551262 -162534270 - L1MC4 LINE L1 -1339 6703 6605 208 209 22 0 chr5 40551262 40551353 -162534179 + (TA)n Simple_repeat Simple_repeat 1 93 0 710 286 94 0 chr5 40551406 40551640 -162533892 + MIR SINE MIR 5 260 -2 2122 79 0 4 chr5 40552670 40552935 -162532597 - AluSq SINE Alu -19 294 31 251 343 37 0 chr5 40553005 40553113 -162532419 - MER20 DNA MER1_type -18 201 90 194 257 105 57 chr5 40553178 40553283 -162532249 + L2 LINE L2 3145 3254 -18 232 266 0 0 chr5 40553543 40553607 -162531925 + A-rich Low_complexity Low_complexity 1 64 0 717 259 80 42 chr5 40553933 40554172 -162531360 + MIR SINE MIR 15 262 0 514 78 0 122 chr5 40554182 40554221 -162531311 + MADE1 DNA Mariner 1 25 -55 2142 81 3 62 chr5 40554221 40554541 -162530991 - AluY SINE Alu -10 301 1 514 78 0 122 chr5 40554541 40554591 -162530941 + MADE1 DNA Mariner 25 79 -1 1710 196 3 0 chr5 40555742 40556043 -162529489 + AluJo SINE Alu 1 302 -10 280 281 235 7 chr5 40556691 40556844 -162528688 - MIR SINE MIR -23 239 52 2429 266 86 14 chr5 40557723 40558831 -162526701 + L2 LINE L2 2076 3262 -51 601 293 35 34 chr5 40559763 40560010 -162525522 - MIR SINE MIR -10 252 3 1415 253 78 27 chr5 40560445 40560685 -162524847 - L1M4 LINE L1 -2174 3972 3746 567 31 0 0 chr5 40560685 40560750 -162524782 - L1PA5 LINE L1 -7 6147 6083 1415 253 78 27 chr5 40560750 40561138 -162524394 - L1M4 LINE L1 -2400 3746 3312 460 285 66 96 chr5 40561372 40561768 -162523764 + L3 LINE CR1 419 802 -775 785 266 66 20 chr5 40561794 40562038 -162523494 - MIR SINE MIR 0 262 8 447 302 90 62 chr5 40562031 40562628 -162522904 + L3 LINE CR1 828 1493 -84 * 257 254 28 14 chr5 40562941 40563012 -162522520 + L3 LINE CR1 1495 1566 -11 215 332 45 80 chr5 40563021 40563398 -162522134 + L2 LINE L2 2382 2745 -569 1750 193 0 0 chr5 40563404 40563694 -162521838 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 40563694 40563715 -162521817 + AT_rich Low_complexity Low_complexity 1 21 0 851 235 6 0 chr5 40563716 40563882 -162521650 + AluJb SINE Alu 134 300 -12 303 104 0 0 chr5 40564199 40564247 -162521285 + (TG)n Simple_repeat Simple_repeat 1 48 0 808 269 43 35 chr5 40565401 40565657 -162519875 - MIR SINE MIR -3 259 2 1971 142 3 3 chr5 40565801 40566090 -162519442 + AluSx SINE Alu 1 289 -23 280 282 105 8 chr5 40566583 40566707 -162518825 - Charlie8 DNA MER1_type -1987 430 295 2110 121 3 0 chr5 40566715 40567038 -162518494 + AluSp SINE Alu 1 324 0 445 231 22 0 chr5 40567140 40567231 -162518301 - Charlie8 DNA MER1_type -2278 139 47 271 309 67 138 chr5 40567391 40567601 -162517931 - MER91A DNA MER1_type 0 196 2 2363 95 0 0 chr5 40568000 40568304 -162517228 + AluSc SINE Alu 1 304 -5 186 278 93 0 chr5 40568927 40568981 -162516551 + L3b LINE CR1 1274 1332 -251 619 243 130 0 chr5 40570845 40571007 -162514525 - MER5A DNA MER1_type 0 189 4 232 287 37 37 chr5 40571028 40571164 -162514368 + L1M2 LINE L1 5524 5659 -641 218 159 45 0 chr5 40571167 40571211 -162514321 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1930 152 35 0 chr5 40571735 40572024 -162513508 + AluSx SINE Alu 1 299 -13 2259 120 0 0 chr5 40572058 40572367 -162513165 - AluSx SINE Alu -3 309 1 306 0 0 0 chr5 40572414 40572448 -162513084 + (TA)n Simple_repeat Simple_repeat 1 34 0 482 350 41 16 chr5 40576517 40576763 -162508769 + L3b LINE CR1 1112 1363 -220 2407 100 0 0 chr5 40576773 40577084 -162508448 - AluSx SINE Alu -1 311 1 206 326 10 77 chr5 40577503 40577631 -162507901 + MIR3 SINE MIR 46 162 -46 261 146 0 0 chr5 40577662 40577710 -162507822 + (ATG)n Simple_repeat Simple_repeat 1 48 0 349 264 200 0 chr5 40578987 40579127 -162506405 - MIR SINE MIR 0 262 95 315 328 50 0 chr5 40579431 40579550 -162505982 + MIR SINE MIR 77 201 -61 2227 119 0 0 chr5 40579928 40580231 -162505301 - AluSq SINE Alu -10 303 1 982 202 44 39 chr5 40581487 40581849 -162503683 + L1M4 LINE L1 3327 3690 -2456 4591 107 10 0 chr5 40581849 40582523 -162503009 - LOR1-int LTR ERV1 -3984 4136 3456 1497 141 11 38 chr5 40582523 40582878 -162502654 - MER4A LTR ERV1 0 664 261 669 91 0 10 chr5 40582878 40582977 -162502555 - MER4A LTR ERV1 -566 98 1 1488 113 17 0 chr5 40582977 40583207 -162502325 - LOR1-int LTR ERV1 -4661 3459 3226 710 100 0 0 chr5 40583207 40583307 -162502225 - AluSg/x SINE Alu -13 299 200 2930 94 16 0 chr5 40583313 40583758 -162501774 - LOR1-int LTR ERV1 -4925 3195 2744 286 170 40 10 chr5 40583963 40584063 -162501469 + (TA)n Simple_repeat Simple_repeat 1 103 0 375 123 0 15 chr5 40584153 40584218 -162501314 - MER4A LTR ERV1 -566 98 35 267 171 0 29 chr5 40584195 40584265 -162501267 + LTR66 LTR ERVL 376 443 -167 * 231 214 0 0 chr5 40584265 40584307 -162501225 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 337 189 44 56 chr5 40584313 40584403 -162501129 + L1MC4 LINE L1 6614 6702 -1340 13371 94 50 13 chr5 40584407 40586619 -162498913 - LOR1b-int LTR ERV1 -5477 2643 350 2522 113 25 0 chr5 40586621 40586985 -162498547 - THE1C LTR MaLR -2 373 1 9891 113 28 19 chr5 40586991 40588173 -162497359 - THE1C-int LTR MaLR -6 1574 372 2061 141 40 0 chr5 40588173 40588471 -162497061 + AluSx SINE Alu 1 310 -2 9891 113 28 19 chr5 40588471 40588847 -162496685 - THE1C-int LTR MaLR -1208 372 1 2464 115 19 0 chr5 40588847 40589211 -162496321 - THE1C LTR MaLR 0 375 5 1843 179 23 14 chr5 40589214 40589746 -162495786 - LOR1b-int LTR ERV1 -7704 416 1 1580 142 12 0 chr5 40589746 40589999 -162495533 - LOR1b LTR ERV1 0 461 206 2015 154 6 12 chr5 40590128 40590458 -162495074 - MER1B DNA MER1_type -8 331 4 286 253 0 0 chr5 40590504 40590579 -162494953 + L1M4 LINE L1 3969 4043 -2103 1797 269 40 10 chr5 40590680 40591360 -162494172 + L1M4 LINE L1 4256 4955 -1191 2089 134 0 0 chr5 40591369 40591660 -162493872 - AluSx SINE Alu -21 291 1 518 244 75 25 chr5 40592735 40592936 -162492596 + MLT1J LTR MaLR 5 215 -296 1427 126 24 5 chr5 40593462 40593669 -162491863 - AluJb SINE Alu -17 295 85 246 32 0 0 chr5 40594600 40594631 -162490901 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 1076 180 11 6 chr5 40595047 40595230 -162490302 - AluJo SINE Alu -128 184 1 920 242 21 0 chr5 40596975 40597169 -162488363 - MER58A DNA MER1_type -1 223 26 24 32 0 0 chr5 40597208 40597239 -162488293 + AT_rich Low_complexity Low_complexity 1 31 0 263 268 102 51 chr5 40597274 40597431 -162488101 - L2 LINE L2 -12 3301 3137 2164 136 0 7 chr5 40597529 40597837 -162487695 + AluSx SINE Alu 1 306 -6 223 253 0 33 chr5 40598100 40598191 -162487341 + CT-rich Low_complexity Low_complexity 1 88 0 326 302 12 0 chr5 40598702 40598788 -162486744 + L2 LINE L2 3213 3299 -14 21 36 0 0 chr5 40599744 40599772 -162485760 + AT_rich Low_complexity Low_complexity 1 28 0 184 331 83 8 chr5 40600043 40600164 -162485368 - MIR SINE MIR -123 139 10 668 267 56 6 chr5 40602496 40602676 -162482856 + MIR SINE MIR 32 220 -42 1860 225 72 19 chr5 40605059 40606115 -162479417 - L1ME2 LINE L1 -12 6152 5008 328 43 0 0 chr5 40606116 40606162 -162479370 - L1PA3 LINE L1 0 6155 6110 27911 46 5 2 chr5 40606263 40609969 -162475563 - L1P LINE L1 -1014 5132 1419 296 263 86 7 chr5 40610115 40610267 -162475265 - L1ME2 LINE L1 -2755 3391 3228 203 116 47 0 chr5 40611205 40611248 -162474284 + CT-rich Low_complexity Low_complexity 4 48 0 1410 202 55 55 chr5 40611347 40611728 -162473804 - MLT2C2 LTR ERVL -2 462 82 251 258 0 30 chr5 40612783 40612849 -162472683 + MER91 DNA MER1_type 119 182 -8 189 265 0 0 chr5 40612990 40613039 -162472493 + MIR SINE MIR 101 149 -113 385 237 92 27 chr5 40614018 40614410 -162471122 - MLT1J2 LTR MaLR 0 446 1 2114 109 3 0 chr5 40615663 40615946 -162469586 - AluSx SINE Alu -23 289 6 22 35 0 0 chr5 40615950 40615979 -162469553 + AT_rich Low_complexity Low_complexity 1 29 0 182 298 0 0 chr5 40616095 40616152 -162469380 + L3 LINE CR1 1362 1418 -159 418 297 113 57 chr5 40616161 40616572 -162468960 + L1MC/D LINE L1 5144 5576 -757 385 291 24 0 chr5 40618764 40618891 -162466641 - MIR3 SINE MIR -49 159 30 258 273 0 30 chr5 40620196 40620295 -162465237 + GA-rich Low_complexity Low_complexity 4 99 0 464 291 46 70 chr5 40620295 40620555 -162464977 - MIR SINE MIR 0 262 14 434 275 0 8 chr5 40620603 40620723 -162464809 + MER94 DNA DNA 5 123 -11 212 327 0 0 chr5 40621755 40621810 -162463722 - L2 LINE L2 -13 3259 3205 23 0 0 0 chr5 40621884 40621907 -162463625 + AT_rich Low_complexity Low_complexity 1 23 0 316 270 99 0 chr5 40622128 40622239 -162463293 - MIR SINE MIR -82 180 59 430 170 21 32 chr5 40623125 40623219 -162462313 + Charlie3 DNA MER1_type 2620 2712 0 217 189 11 42 chr5 40623813 40623908 -162461624 + CT-rich Low_complexity Low_complexity 1 92 0 2177 233 71 43 chr5 40623908 40624197 -162461335 - MLT1E LTR MaLR -42 551 272 216 86 0 0 chr5 40624197 40624232 -162461300 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1994 109 3 21 chr5 40624233 40624518 -162461014 - AluSx SINE Alu -32 280 1 2177 233 71 43 chr5 40624518 40624762 -162460770 - MLT1E LTR MaLR -320 273 1 2581 178 30 19 chr5 40624866 40625328 -162460204 + MLT1C LTR MaLR 1 467 0 460 250 48 125 chr5 40626043 40626355 -162459177 + L2 LINE L2 2922 3209 -104 192 379 35 9 chr5 40626555 40626671 -162458861 + L2 LINE L2 2639 2757 -557 2421 139 123 3 chr5 40626681 40627063 -162458469 + MSTA LTR MaLR 1 428 0 2115 210 42 36 chr5 40627088 40627587 -162457945 - MLT1D LTR MaLR 0 505 4 321 354 63 56 chr5 40627663 40627948 -162457584 + L2 LINE L2 2986 3272 0 24 0 0 0 chr5 40628931 40628955 -162456577 + AT_rich Low_complexity Low_complexity 1 24 0 561 308 25 14 chr5 40628964 40629243 -162456289 + L1ME4a LINE L1 4023 4304 -1842 385 281 149 61 chr5 40629442 40629980 -162455552 + L1ME4a LINE L1 4639 5223 -923 232 354 68 14 chr5 40630033 40630313 -162455219 + L1ME4a LINE L1 5280 5574 -588 233 170 0 19 chr5 40630401 40630454 -162455078 + L1ME4a LINE L1 5768 5819 -302 390 197 87 94 chr5 40630795 40630922 -162454610 - MLT1H LTR MaLR 0 549 424 617 270 143 44 chr5 40630978 40631271 -162454261 - MLT1H LTR MaLR -221 328 7 268 200 0 0 chr5 40631847 40631902 -162453630 + L1ME4a LINE L1 5956 6010 -111 408 241 0 0 chr5 40631990 40632106 -162453426 + (TA)n Simple_repeat Simple_repeat 1 116 0 228 140 40 40 chr5 40632107 40632157 -162453375 + L1MD3 LINE L1 6619 6668 -1327 26 64 0 0 chr5 40632162 40632209 -162453323 + AT_rich Low_complexity Low_complexity 1 47 0 291 246 14 101 chr5 40633003 40633141 -162452391 + L2 LINE L2 3187 3312 -1 218 245 19 0 chr5 40633140 40633193 -162452339 + L2 LINE L2 2283 2336 -978 * 243 306 14 0 chr5 40633676 40633748 -162451784 - MER21A LTR ERV1 -127 804 732 1228 179 4 52 chr5 40633828 40634083 -162451449 - MLT2C2 LTR ERVL 0 464 232 774 150 0 21 chr5 40634114 40634254 -162451278 - MLT1A1 LTR MaLR -228 137 1 2186 222 116 21 chr5 40634331 40634993 -162450539 + MER50 LTR ERV1 10 734 0 4470 134 15 126 chr5 40635336 40636888 -162448644 - pTR5 LTR ERV1 0 2606 1524 466 254 154 110 chr5 40637216 40637645 -162447887 + MLT1J2 LTR MaLR 2 449 -1 2256 73 0 57 chr5 40638248 40638565 -162446967 + AluY SINE Alu 1 299 -12 233 125 0 42 chr5 40639373 40639421 -162446111 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 452 163 12 0 chr5 40640015 40640095 -162445437 - MER3 DNA MER1_type 0 209 129 201 217 52 9 chr5 40640095 40640210 -162445322 + (TA)n Simple_repeat Simple_repeat 2 121 0 863 191 0 0 chr5 40640274 40640421 -162445111 - MER3 DNA MER1_type -62 147 1 2034 117 3 7 chr5 40641260 40641596 -162443936 - AluSq SINE Alu 0 335 1 23 0 0 0 chr5 40641854 40641877 -162443655 + AT_rich Low_complexity Low_complexity 1 23 0 2003 147 3 3 chr5 40643942 40644254 -162441278 + AluSx SINE Alu 1 312 0 225 239 141 0 chr5 40644768 40644839 -162440693 + L2 LINE L2 3233 3313 0 198 0 0 0 chr5 40646207 40646229 -162439303 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1922 118 25 21 chr5 40646867 40647171 -162438361 - AluSx SINE Alu 0 305 1 359 335 17 39 chr5 40649227 40649406 -162436126 + MER5A DNA MER1_type 2 176 -13 25 0 0 0 chr5 40649603 40649628 -162435904 + AT_rich Low_complexity Low_complexity 1 25 0 421 228 34 114 chr5 40649771 40650008 -162435524 + MLT1J LTR MaLR 101 318 -193 29 0 0 0 chr5 40650749 40650778 -162434754 + AT_rich Low_complexity Low_complexity 1 29 0 185 286 65 0 chr5 40651432 40651509 -162434023 + MIR SINE MIR 172 253 -9 336 337 26 26 chr5 40651597 40651768 -162433764 - MER5A DNA MER1_type -4 185 4 21 0 0 0 chr5 40652924 40652945 -162432587 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 40654148 40654172 -162431360 + (CA)n Simple_repeat Simple_repeat 1 24 0 1167 202 85 8 chr5 40654174 40654432 -162431100 + L1MC3 LINE L1 5909 6186 -1599 * 3619 186 66 5 chr5 40654407 40655160 -162430372 + L1MC3 LINE L1 6845 7643 -142 43321 50 3 1 chr5 40655181 40661318 -162424214 + L1PA4 LINE L1 1 6152 -3 5426 94 42 7 chr5 40661321 40662053 -162423479 + L1PA7 LINE L1 5384 6141 -13 189 0 0 0 chr5 40662619 40662640 -162422892 + (TA)n Simple_repeat Simple_repeat 2 22 0 387 212 25 76 chr5 40664268 40664386 -162421146 - MIR3 SINE MIR -31 177 66 303 273 5 127 chr5 40665191 40665411 -162420121 + MIR3 SINE MIR 16 208 0 2811 178 34 2 chr5 40666853 40667348 -162418184 + L1MB5 LINE L1 5656 6166 -8 568 132 28 0 chr5 40667365 40667471 -162418061 + L1MA8 LINE L1 6183 6291 0 458 242 11 0 chr5 40667530 40667625 -162417907 - MIR SINE MIR -86 176 81 400 286 140 12 chr5 40667631 40667802 -162417730 - MIR3 SINE MIR 0 208 16 258 351 36 56 chr5 40668702 40668953 -162416579 - L2 LINE L2 -189 3083 2838 2412 81 3 0 chr5 40669237 40669545 -162415987 + AluSx SINE Alu 1 309 -3 1357 182 40 121 chr5 40671373 40671769 -162413763 - MLT1A1 LTR MaLR -1 364 1 1053 191 9 61 chr5 40672036 40672266 -162413266 + MER20 DNA MER1_type 2 219 0 181 329 0 12 chr5 40672281 40672363 -162413169 + MER5B DNA MER1_type 28 108 -70 288 351 95 24 chr5 40672550 40672718 -162412814 - MIR SINE MIR -35 227 48 2304 84 7 26 chr5 40672722 40673030 -162412502 - AluSg SINE Alu -8 302 1 27 0 0 0 chr5 40673813 40673840 -162411692 + AT_rich Low_complexity Low_complexity 1 27 0 810 256 42 0 chr5 40673896 40674064 -162411468 - MER96 DNA MER1_type 0 175 1 205 297 242 0 chr5 40674064 40674155 -162411377 - L2 LINE L2 -7 3306 3194 334 287 60 48 chr5 40674348 40674613 -162410919 + MLT1L LTR MaLR 237 615 0 299 299 97 29 chr5 40675824 40676087 -162409445 - MLT1L LTR MaLR -227 284 1 860 271 0 0 chr5 40676394 40676593 -162408939 + MER58A DNA MER1_type 26 224 0 307 269 67 42 chr5 40676743 40676899 -162408633 - MIR SINE MIR -67 141 30 1360 278 91 35 chr5 40677839 40678332 -162407200 + LTR33 LTR ERVL 1 521 0 2026 150 0 7 chr5 40678773 40679073 -162406459 - AluJo SINE Alu -12 300 3 484 322 184 43 chr5 40679116 40680960 -162404572 + L2 LINE L2 906 3009 -263 186 296 28 70 chr5 40681042 40681113 -162404419 + L2 LINE L2 3153 3220 -52 387 0 0 0 chr5 40682835 40682878 -162402654 + (CA)n Simple_repeat Simple_repeat 2 44 0 2710 281 97 30 chr5 40683554 40684714 -162400818 + ERVL LTR ERVL 87 1324 -4440 2560 87 43 0 chr5 40684763 40685109 -162400423 + L1PA11 LINE L1 5808 6168 -6 429 257 43 45 chr5 40685204 40685499 -162400033 + MERVL-C1 LTR ERVL 5064 5427 -337 504 171 86 26 chr5 40685544 40685661 -162399871 + MERVL-C1 LTR ERVL 5535 5658 -106 715 194 44 44 chr5 40685674 40685952 -162399580 + MLT2C1 LTR ERVL 27 395 -2 957 279 29 49 chr5 40685959 40686306 -162399226 + L1M4b LINE L1 162 501 -5783 1549 205 92 49 chr5 40686352 40686777 -162398755 - MST-int LTR MaLR 0 1651 1209 340 22 22 0 chr5 40687317 40687362 -162398170 + MADE1 DNA Mariner 1 46 -34 2876 147 6 51 chr5 40687592 40688081 -162397451 - LTR24 LTR ERV1 0 467 1 2141 118 10 0 chr5 40688631 40688928 -162396604 - AluSx SINE Alu -12 300 1 202 311 22 72 chr5 40688929 40689109 -162396423 + MIR3 SINE MIR 36 206 -2 2190 157 48 45 chr5 40690391 40690832 -162394700 - MER65A LTR ERV1 0 445 4 751 218 0 0 chr5 40691302 40691435 -162394097 + FLAM_A SINE Alu 1 133 0 456 263 53 53 chr5 40691733 40691942 -162393590 - L2 LINE L2 0 3313 3105 487 226 57 85 chr5 40691993 40692209 -162393323 + L1MC5 LINE L1 7614 7824 -137 2321 137 117 10 chr5 40692209 40692595 -162392937 - MSTA LTR MaLR -1 427 1 487 226 57 85 chr5 40692595 40692626 -162392906 + L1MC5 LINE L1 7824 7854 -107 2393 59 0 62 chr5 40692645 40692968 -162392564 - AluY SINE Alu -8 303 1 3600 252 106 67 chr5 40693175 40695014 -162390518 - L1MC4 LINE L1 -133 7769 5765 238 319 61 27 chr5 40695006 40695382 -162390150 - L1MC4 LINE L1 -852 5294 4906 * 253 368 109 47 chr5 40695382 40695784 -162389748 - L2 LINE L2 -42 3230 2804 575 305 77 48 chr5 40698376 40698793 -162386739 - L2 LINE L2 0 3313 2885 1568 214 14 103 chr5 40701112 40701705 -162383827 - L1M4 LINE L1 -3293 2853 2314 306 297 9 63 chr5 40702523 40702634 -162382898 + L1M4b LINE L1 540 644 -5740 1038 252 125 34 chr5 40702669 40703211 -162382321 + L1M4b LINE L1 777 1433 -4870 * 1896 240 46 43 chr5 40703202 40703853 -162381679 + L1 LINE L1 4210 4862 -1284 4606 153 88 16 chr5 40703859 40704629 -162380903 - LTR1B LTR ERV1 0 826 1 16908 141 28 36 chr5 40704629 40707415 -162378117 - HUERS-P2 LTR ERV1 0 3088 325 886 171 6 34 chr5 40707418 40707593 -162377939 + L1MB3 LINE L1 6011 6180 -3 387 252 61 0 chr5 40708239 40708354 -162377178 + MER5B DNA MER1_type 1 122 -56 480 266 79 0 chr5 40708593 40708732 -162376800 - MER96 DNA MER1_type? -5 170 21 21 36 0 0 chr5 40709371 40709399 -162376133 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 40709934 40709957 -162375575 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 40710388 40710432 -162375100 + AT_rich Low_complexity Low_complexity 1 44 0 265 232 21 0 chr5 40711280 40711375 -162374157 + (TCCA)n Simple_repeat Simple_repeat 4 100 0 309 352 14 21 chr5 40711837 40711979 -162373553 - MIR SINE MIR -102 160 20 601 263 16 27 chr5 40712127 40712313 -162373219 + LTR52 LTR ERVL 1 184 -237 1519 275 33 31 chr5 40712324 40712779 -162372753 + HERVL74 LTR ERVL 212 667 -2889 2858 263 45 13 chr5 40713026 40713337 -162372195 + HERVL74 LTR ERVL 998 1298 -2279 2455 91 46 70 chr5 40713337 40713559 -162371973 - THE1B LTR MaLR 0 364 153 2255 101 0 10 chr5 40713559 40713855 -162371677 + AluSc SINE Alu 1 293 -16 2455 91 46 70 chr5 40713855 40714005 -162371527 - THE1B LTR MaLR -211 153 1 2858 263 45 13 chr5 40714005 40714762 -162370770 + HERVL74 LTR ERVL 1298 2095 -1482 360 64 0 0 chr5 40714904 40714951 -162370581 + (CA)n Simple_repeat Simple_repeat 2 48 0 1504 266 51 72 chr5 40714956 40715585 -162369947 + L1M4b LINE L1 113 728 -6131 1711 180 6 49 chr5 40715596 40715946 -162369586 + MLT2C1 LTR ERVL 4 338 -59 360 0 0 0 chr5 40715947 40715987 -162369545 + (TG)n Simple_repeat Simple_repeat 2 41 0 1490 268 94 9 chr5 40716144 40716600 -162368932 + ERVL-C1 LTR ERVL 211 705 -5059 3102 256 73 11 chr5 40716679 40718362 -162367170 + ERVL-C1 LTR ERVL 880 2769 -2995 6615 201 9 15 chr5 40718363 40719121 -162366411 + ERVL-C1 LTR ERVL 3887 4635 -1129 1184 40 7 14 chr5 40719121 40719294 -162366238 - L1PA5 LINE L1 0 6154 6008 6615 201 9 15 chr5 40719294 40719817 -162365715 + ERVL-C1 LTR ERVL 4635 5160 -604 496 197 96 50 chr5 40719817 40720010 -162365522 + L1M3 LINE L1 5465 5661 -512 1771 185 20 0 chr5 40720010 40720313 -162365219 + AluJo SINE Alu 1 309 -3 496 197 96 50 chr5 40720313 40720326 -162365206 + L1M3 LINE L1 5661 5672 -501 951 100 17 22 chr5 40720326 40720378 -162365154 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 951 100 17 22 chr5 40720378 40720558 -162364974 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1182 225 47 63 chr5 40720626 40720813 -162364719 + L1ME1 LINE L1 5678 5866 -300 2325 167 64 17 chr5 40720813 40721220 -162364312 + MSTB LTR MaLR 1 426 0 1182 225 47 63 chr5 40721220 40721477 -162364055 + L1ME1 LINE L1 5866 6115 -51 2021 131 3 3 chr5 40721487 40721778 -162363754 - AluSx SINE Alu -10 302 12 2069 132 73 51 chr5 40721780 40722136 -162363396 - THE1B LTR MaLR 0 364 1 3525 109 2 0 chr5 40722136 40722615 -162362917 - THE1B-int LTR MaLR 0 1580 1101 3988 83 59 16 chr5 40722617 40723193 -162362339 - THE1B-int LTR MaLR -979 601 1 2254 121 72 26 chr5 40723193 40723541 -162361991 - THE1B LTR MaLR 0 364 1 557 309 193 15 chr5 40723653 40724058 -162361474 + L1MEc LINE L1 49 525 -5871 1000 144 13 0 chr5 40724645 40724798 -162360734 + L1MA4 LINE L1 5 159 -5169 8047 153 33 29 chr5 40724801 40726223 -162359309 + MSTA-int LTR MaLR 153 1580 0 1962 185 123 5 chr5 40726223 40726606 -162358926 + MSTA LTR MaLR 1 428 0 5414 183 16 14 chr5 40726606 40727752 -162357780 + L1MA4 LINE L1 3424 4571 -1757 278 291 40 53 chr5 40727862 40727923 -162357609 + MIR SINE MIR 103 163 -99 2166 133 0 0 chr5 40727923 40728223 -162357309 - AluSx SINE Alu -12 300 1 278 291 40 53 chr5 40728223 40728312 -162357220 + MIR SINE MIR 163 251 -11 5172 177 43 7 chr5 40728518 40730418 -162355114 + L1MA4 LINE L1 4527 6476 -6 324 337 30 0 chr5 40731207 40731308 -162354224 + MIR SINE MIR 37 140 -68 2124 38 0 30 chr5 40733300 40733567 -162351965 + AluY SINE Alu 49 307 -4 323 265 43 43 chr5 40733665 40733782 -162351750 + MIR3 SINE MIR 85 201 -7 243 103 0 0 chr5 40735746 40735791 -162349741 + (CA)n Simple_repeat Simple_repeat 1 84 0 243 103 0 0 chr5 40735791 40735830 -162349702 + (CA)n Simple_repeat Simple_repeat 1 39 0 1343 175 129 10 chr5 40736268 40736577 -162348955 + MER4A LTR ERV1 1 346 -318 624 173 251 62 chr5 40736602 40736633 -162348899 + MER4C LTR ERV1 159 183 -282 2416 75 0 0 chr5 40736633 40736925 -162348607 + AluSc SINE Alu 1 292 -17 624 173 251 62 chr5 40736925 40737136 -162348396 + MER4C LTR ERV1 183 447 -18 1339 179 146 94 chr5 40737157 40737356 -162348176 + MER4C-int LTR ERV1 1 188 -6410 243 0 0 0 chr5 40737356 40737383 -162348149 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1339 179 146 94 chr5 40737383 40737780 -162347752 + MER4C-int LTR ERV1 188 628 -5970 365 635 0 6 chr5 40737784 40737940 -162347592 + (TG)n Simple_repeat Simple_repeat 2 156 0 269 305 39 49 chr5 40738989 40739192 -162346340 + MER4C-int LTR ERV1 1235 1435 -5366 387 312 43 34 chr5 40740652 40740978 -162344554 + MER110-int LTR ERV1 2549 2634 -4167 2168 105 3 7 chr5 40741000 40741295 -162344237 - AluSg SINE Alu -16 294 1 295 363 40 27 chr5 40741466 40741942 -162343590 + MER110-int LTR ERV1 3160 3641 -3481 355 309 109 78 chr5 40741985 40742444 -162343088 + MER110-int LTR ERV1 3381 3853 -2948 2352 77 0 3 chr5 40742479 40742778 -162342754 + AluY SINE Alu 1 298 -13 367 294 47 47 chr5 40743349 40743519 -162342013 + MER110-int LTR ERV1 2137 2306 -2341 183 231 0 77 chr5 40743527 40743592 -162341940 + L2 LINE L2 2527 2586 -728 392 301 65 75 chr5 40743604 40744083 -162341449 + MER110-int LTR ERV1 2390 2863 -1784 1107 319 52 36 chr5 40744440 40745227 -162340305 + MER110-int LTR ERV1 5633 6432 -690 900 302 8 8 chr5 40745342 40745610 -162339922 - PABL_B-int LTR ERV1 -439 6683 6416 330 87 0 0 chr5 40745659 40745705 -162339827 + (TG)n Simple_repeat Simple_repeat 2 47 0 1791 170 0 0 chr5 40745706 40745988 -162339544 - AluJb SINE Alu -26 286 5 35 54 0 0 chr5 40745992 40746048 -162339484 + AT_rich Low_complexity Low_complexity 1 56 0 1687 152 42 18 chr5 40746094 40746377 -162339155 - AluSx SINE Alu -22 290 1 330 312 114 57 chr5 40746428 40746745 -162338787 - L1MEc LINE L1 -4630 1754 1420 233 224 9 75 chr5 40746753 40746860 -162338672 - L1MEc LINE L1 -5037 1526 1427 228 254 0 0 chr5 40746892 40746951 -162338581 + T-rich Low_complexity Low_complexity 1 59 0 2105 133 54 101 chr5 40747342 40748013 -162337519 + MER4E LTR ERV1 1 759 -7 1156 267 157 33 chr5 40748209 40748815 -162336717 - LTR50 LTR ERVL -111 684 4 2078 175 85 15 chr5 40748875 40749275 -162336257 - MSTA LTR MaLR 0 428 1 8145 198 34 9 chr5 40749275 40749361 -162336171 - MSTA-int LTR MaLR 0 1651 1569 5178 60 51 0 chr5 40749361 40749989 -162335543 - PABL_A LTR ERV1 0 660 1 8145 198 34 9 chr5 40749989 40751508 -162334024 - MSTA-int LTR MaLR -82 1569 5 1794 183 0 0 chr5 40751510 40751795 -162333737 - AluSx SINE Alu -23 289 5 1854 179 117 8 chr5 40751820 40752195 -162333337 - MSTA LTR MaLR -12 416 1 7021 228 68 43 chr5 40752195 40753807 -162331725 - MSTA-int LTR MaLR 0 1651 1 1972 179 79 55 chr5 40753807 40753848 -162331684 - MSTA LTR MaLR 0 428 389 2077 130 0 31 chr5 40753848 40754170 -162331362 + AluSx SINE Alu 1 312 0 1972 179 79 55 chr5 40754170 40754546 -162330986 - MSTA LTR MaLR -39 389 1 1695 157 118 21 chr5 40754998 40755336 -162330196 + THE1C LTR MaLR 1 371 -4 279 257 0 14 chr5 40755455 40755525 -162330007 + MLT1E1 LTR MaLR 5 73 -581 2694 102 42 49 chr5 40755525 40755956 -162329576 + MSTA LTR MaLR 1 428 0 631 164 109 0 chr5 40755956 40756084 -162329448 + MSTA-int LTR MaLR 1 142 -1509 1973 135 47 75 chr5 40756084 40756470 -162329062 + THE1C LTR MaLR 1 375 0 9511 158 37 7 chr5 40756471 40758004 -162327528 + THE1C-int LTR MaLR 2 1580 0 1595 154 63 83 chr5 40758004 40758389 -162327143 + THE1C LTR MaLR 1 390 -38 2128 127 3 13 chr5 40758389 40758704 -162326828 - AluSx SINE Alu 0 312 1 1595 154 63 83 chr5 40758704 40758743 -162326789 + THE1C LTR MaLR 390 428 0 7599 195 43 16 chr5 40758743 40760217 -162325315 + MSTA-int LTR MaLR 138 1651 0 2280 174 38 21 chr5 40760217 40760636 -162324896 + MSTA LTR MaLR 1 426 -2 1980 227 92 53 chr5 40760639 40761202 -162324330 + MLT1E1 LTR MaLR 70 654 0 472 333 104 4 chr5 40761372 40761603 -162323929 + L1MEd LINE L1 121 374 -6022 1181 187 57 66 chr5 40762147 40762479 -162323053 - L1MC4 LINE L1 -715 7327 6999 * 9302 168 15 21 chr5 40762468 40763120 -162322412 - L1PB1 LINE L1 0 6867 6212 2247 91 28 0 chr5 40763120 40763406 -162322126 + AluSc SINE Alu 1 294 -15 9302 168 15 21 chr5 40763406 40763449 -162322083 - L1PB1 LINE L1 -655 6212 6170 1966 135 3 0 chr5 40763449 40763781 -162321751 - AluSx SINE Alu 0 333 1 9302 168 15 21 chr5 40763781 40765954 -162319578 - L1PB1 LINE L1 -697 6170 4012 2054 101 102 46 chr5 40765956 40766370 -162319162 - LTR14B LTR ERVK 0 608 1 5774 175 66 2 chr5 40766374 40767671 -162317861 - L1PB1 LINE L1 -2848 4014 2634 2784 122 18 0 chr5 40767670 40768184 -162317348 + L1PBa LINE L1 997 1704 -5159 * 2256 106 0 16 chr5 40768769 40769081 -162316451 + AluSx SINE Alu 1 307 -5 209 253 76 38 chr5 40769209 40769288 -162316244 + L2 LINE L2 2412 2493 -821 2038 144 33 36 chr5 40772376 40772738 -162312794 + THE1C LTR MaLR 14 374 -1 792 258 89 59 chr5 40773058 40773652 -162311880 + L1MEd LINE L1 678 1289 -4916 319 302 39 0 chr5 40773896 40774025 -162311507 + LTR67 LTR ERVL 403 536 -21 519 280 7 7 chr5 40774120 40774263 -162311269 + L2 LINE L2 3171 3313 0 298 284 74 0 chr5 40774933 40775014 -162310518 + L2 LINE L2 3186 3272 0 664 188 62 45 chr5 40776697 40776824 -162308708 + L1MB4 LINE L1 6000 6132 -48 1812 140 0 58 chr5 40776824 40777132 -162308400 + AluSx SINE Alu 1 290 -22 664 188 62 45 chr5 40777132 40777180 -162308352 + L1MB4 LINE L1 6132 6178 -2 10280 32 0 1 chr5 40777195 40779121 -162306411 - L1PA3 LINE L1 -5 6150 4229 272 175 0 0 chr5 40779224 40779264 -162306268 - MER2 DNA MER2_type -305 40 1 811 270 104 50 chr5 40779276 40779306 -162306226 + MLT1J1 LTR MaLR 2 29 -417 2186 119 3 7 chr5 40779306 40779608 -162305924 - AluSq SINE Alu -12 301 1 811 270 104 50 chr5 40779608 40779999 -162305533 + MLT1J1 LTR MaLR 29 446 0 730 278 64 4 chr5 40781166 40781400 -162304132 - LTR16A LTR ERVL 0 450 203 263 224 17 0 chr5 40781436 40781494 -162304038 - LTR16A1 LTR ERVL -336 121 63 310 303 40 36 chr5 40783101 40783279 -162302253 + MIR SINE MIR 14 193 -63 749 276 33 16 chr5 40783803 40784046 -162301486 - MIR SINE MIR -8 254 8 2213 94 3 3 chr5 40784783 40785071 -162300461 - AluSx SINE Alu -18 294 7 1052 247 120 44 chr5 40789383 40789865 -162295667 - LTR33A LTR ERVL -4 519 1 389 256 111 26 chr5 40790545 40790662 -162294870 + L2 LINE L2 3187 3313 0 190 215 13 101 chr5 40790849 40790869 -162294663 + MER5A DNA MER1_type 1 13 -176 312 262 221 14 chr5 40790869 40791014 -162294518 - MER5B DNA MER1_type -3 175 1 1908 203 3 14 chr5 40791642 40791987 -162293545 + MER58B DNA MER1_type 1 341 0 667 282 73 54 chr5 40792160 40792638 -162292894 - LTR33 LTR ERVL -6 515 29 1203 173 106 4 chr5 40793090 40793327 -162292205 + MER2 DNA MER2_type 83 343 -2 6464 180 88 13 chr5 40796494 40797936 -162287596 - Looper DNA T2_type -1 1557 8 1042 122 13 0 chr5 40798008 40798164 -162287368 + L1MB3 LINE L1 6026 6183 0 228 279 90 57 chr5 40798518 40798640 -162286892 - L2 LINE L2 -21 3251 3167 526 340 46 17 chr5 40799024 40799262 -162286270 + MIR SINE MIR 12 256 -6 2228 158 48 5 chr5 40799775 40800149 -162285383 + MLT1B LTR MaLR 1 390 0 378 233 121 17 chr5 40800538 40800654 -162284878 + MIR SINE MIR 71 198 -64 234 0 0 0 chr5 40801831 40801857 -162283675 + (TG)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr5 40801983 40802011 -162283521 + AT_rich Low_complexity Low_complexity 1 28 0 1476 263 11 3 chr5 40804524 40804893 -162280639 - LTR16A LTR ERVL -60 390 19 4285 271 64 34 chr5 40805346 40805722 -162279810 - HERV16 LTR ERVL -3507 1489 1126 867 222 88 5 chr5 40805722 40805916 -162279616 - MER58C DNA MER1_type -3 212 3 4285 271 64 34 chr5 40805916 40806954 -162278578 - HERV16 LTR ERVL -3870 1126 33 736 295 51 5 chr5 40806981 40807198 -162278334 - LTR16A LTR ERVL -18 432 206 1431 100 10 69 chr5 40807205 40807496 -162278036 - L1PA6 LINE L1 -2 6152 5879 24425 47 9 3 chr5 40808047 40811711 -162273821 + L1PA4 LINE L1 2279 5958 -197 7284 232 24 41 chr5 40811823 40812983 -162272549 + L1 LINE L1 2358 3468 -2678 1630 196 0 0 chr5 40812983 40813258 -162272274 + AluJb SINE Alu 1 275 -37 7284 232 24 41 chr5 40813258 40814157 -162271375 + L1 LINE L1 3468 4381 -1765 605 100 0 0 chr5 40814170 40814250 -162271282 + L1MA3 LINE L1 6222 6301 -4 2416 75 0 0 chr5 40814277 40814569 -162270963 + AluSc SINE Alu 1 292 -17 628 172 276 27 chr5 40814569 40814780 -162270752 + MER4C LTR ERV1 178 447 -18 1374 174 147 100 chr5 40814801 40815000 -162270532 + MER4C-int LTR ERV1 1 189 -6409 243 0 0 0 chr5 40815000 40815027 -162270505 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1374 174 147 100 chr5 40815027 40815429 -162270103 + MER4C-int LTR ERV1 189 636 -5962 268 23 0 47 chr5 40815429 40815472 -162270060 + (TG)n Simple_repeat Simple_repeat 2 42 0 1374 174 147 100 chr5 40815472 40815507 -162270025 + MER4C-int LTR ERV1 636 668 -5930 1594 110 12 41 chr5 40816560 40816806 -162268726 - MER1B DNA MER1_type 0 339 101 250 179 0 0 chr5 40816811 40816850 -162268682 - MER1B DNA MER1_type -298 39 1 24 0 0 0 chr5 40817762 40817786 -162267746 + AT_rich Low_complexity Low_complexity 1 24 0 422 274 40 8 chr5 40818601 40818725 -162266807 + MIR SINE MIR 62 189 -73 183 293 0 0 chr5 40819210 40819251 -162266281 + L2 LINE L2 3224 3264 -8 861 178 0 0 chr5 40819619 40819748 -162265784 + FLAM_A SINE Alu 2 130 -3 341 303 58 110 chr5 40820465 40820947 -162264585 + L2 LINE L2 2856 3312 -1 412 246 53 0 chr5 40823165 40823279 -162262253 + MER103 DNA DNA 44 163 -3 323 275 92 0 chr5 40823464 40823573 -162261959 + MIR3 SINE MIR 59 177 -31 694 268 33 24 chr5 40826102 40826315 -162259217 - MIR SINE MIR -41 221 7 189 0 0 0 chr5 40827401 40827422 -162258110 + (A)n Simple_repeat Simple_repeat 1 21 0 225 247 14 27 chr5 40828225 40828298 -162257234 + MER5A DNA MER1_type 44 115 -74 192 333 0 0 chr5 40828282 40828333 -162257199 - MER5B DNA MER1_type -127 51 1 * 225 0 0 0 chr5 40829049 40829074 -162256458 + (TG)n Simple_repeat Simple_repeat 1 25 0 192 40 0 0 chr5 40829661 40829686 -162255846 + (A)n Simple_repeat Simple_repeat 1 25 0 296 265 10 20 chr5 40830054 40830152 -162255380 + L1MC4a LINE L1 6431 6527 -1281 882 228 63 14 chr5 40830157 40830442 -162255090 - L1MC4 LINE L1 -828 7214 6916 240 255 0 0 chr5 40830529 40830580 -162254952 + L1MD3 LINE L1 7715 7765 -230 303 130 0 0 chr5 40830583 40830637 -162254895 + (TG)n Simple_repeat Simple_repeat 2 55 0 388 241 104 59 chr5 40830657 40830927 -162254605 + L1MC4 LINE L1 7701 7982 -60 2221 134 0 0 chr5 40831987 40832294 -162253238 + AluSp SINE Alu 1 307 -6 231 301 107 10 chr5 40833621 40833724 -162251808 - L2 LINE L2 0 3313 3201 261 0 0 0 chr5 40833764 40833793 -162251739 + (TG)n Simple_repeat Simple_repeat 1 29 0 259 266 75 43 chr5 40835468 40835562 -162249970 - MIR SINE MIR -116 146 50 308 264 322 17 chr5 40836430 40836604 -162248928 + MIR SINE MIR 20 246 -16 186 189 27 0 chr5 40838997 40839034 -162246498 + MIR SINE MIR 108 145 -63 2613 125 10 10 chr5 40839411 40839812 -162245720 + MSTA LTR MaLR 1 401 -27 1598 191 33 4 chr5 40839846 40839997 -162245535 - AluJb SINE Alu -27 285 121 180 0 0 0 chr5 40839997 40840017 -162245515 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1598 191 33 4 chr5 40840017 40840138 -162245394 - AluJb SINE Alu -191 121 5 304 77 0 0 chr5 40840143 40840182 -162245350 + MSTA LTR MaLR 390 428 0 304 325 43 0 chr5 40840586 40840749 -162244783 + MER102b DNA MER1_type 164 333 -8 2508 57 0 0 chr5 40840939 40841240 -162244292 - AluY SINE Alu -6 305 5 1266 91 0 0 chr5 40842319 40842484 -162243048 + AluY SINE Alu 144 308 -3 260 314 33 39 chr5 40843135 40843288 -162242244 + LTR16C LTR ERVL 340 491 0 7155 48 17 43 chr5 40843367 40844456 -162241076 - L1PA7 LINE L1 -1 6153 5066 2839 86 0 20 chr5 40844769 40844900 -162240632 - L1PA7 LINE L1 -1309 4837 4705 2545 69 3 0 chr5 40844900 40845203 -162240329 - AluY SINE Alu -7 304 1 2839 86 0 20 chr5 40845203 40845477 -162240055 - L1PA7 LINE L1 -1441 4705 4440 * 6978 92 4 14 chr5 40845476 40846458 -162239074 + L1P LINE L1 1730 2701 -3445 233 143 0 107 chr5 40846648 40846732 -162238800 - Alu SINE Alu -24 277 203 5253 96 52 4 chr5 40846842 40847668 -162237864 + L1PBa LINE L1 1767 2632 -4231 430 219 6 94 chr5 40847665 40847825 -162237707 - L1MC4 LINE L1 -1026 7016 6871 * 1025 225 132 65 chr5 40847815 40848094 -162237438 - L1MC4a LINE L1 -1158 6650 6391 1206 222 11 0 chr5 40848094 40848360 -162237172 + L1MB3 LINE L1 5915 6183 0 1025 225 132 65 chr5 40848360 40848421 -162237111 - L1MC4a LINE L1 -1417 6391 6336 492 59 35 0 chr5 40848421 40848506 -162237026 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 1025 225 132 65 chr5 40848506 40848671 -162236861 - L1MC4a LINE L1 -1472 6336 6110 508 171 36 0 chr5 40848677 40848788 -162236744 - L1MC4a LINE L1 -1739 6069 5955 1884 222 44 44 chr5 40848844 40849384 -162236148 - L1MC4a LINE L1 -1965 5843 5304 183 129 0 0 chr5 40849706 40849737 -162235795 + (CAGAA)n Simple_repeat Simple_repeat 4 34 0 2011 43 0 0 chr5 40849792 40850026 -162235506 - L1PA5 LINE L1 -13 6141 5908 2507 159 28 30 chr5 40850815 40851288 -162234244 + MER70A LTR ERVL 1 472 0 2972 187 48 5 chr5 40851288 40852361 -162233171 + MER70A-int LTR ERVL 1 1191 -3832 2072 174 38 33 chr5 40852382 40852801 -162232731 + MER70A-int LTR ERVL 2387 2807 -2216 * 5551 164 32 39 chr5 40852790 40853522 -162232010 + MER70A-int LTR ERVL 2947 3683 -1340 1985 174 88 8 chr5 40853522 40853918 -162231614 + MSTA LTR MaLR 1 428 0 5551 164 32 39 chr5 40853918 40854120 -162231412 + MER70A-int LTR ERVL 3683 3885 -1138 2298 119 3 0 chr5 40854120 40854431 -162231101 - AluSx SINE Alu 0 312 1 5551 164 32 39 chr5 40854431 40854884 -162230648 + MER70A-int LTR ERVL 3885 4340 -683 1099 44 0 0 chr5 40854884 40855020 -162230512 - L1PA4 LINE L1 0 6155 6020 5551 164 32 39 chr5 40855020 40855488 -162230044 + MER70A-int LTR ERVL 4340 4882 -141 2179 184 29 15 chr5 40855488 40855900 -162229632 + MER70A LTR ERVL 55 472 0 2184 92 3 38 chr5 40856343 40856659 -162228873 + AluSp SINE Alu 3 307 -6 185 253 76 38 chr5 40857074 40857153 -162228379 + L2 LINE L2 2412 2493 -821 337 294 28 9 chr5 40859237 40859346 -162226186 - L2 LINE L2 -5 3308 3198 645 168 80 0 chr5 40859401 40859526 -162226006 + FLAM_A SINE Alu 5 139 -3 7078 200 93 4 chr5 40862576 40864455 -162221077 + L1MA3 LINE L1 14 2402 -5163 14802 163 33 15 chr5 40864456 40867624 -162217908 + L1MA3 LINE L1 3199 6463 -1261 2008 76 43 29 chr5 40867624 40867901 -162217631 + AluSq SINE Alu 31 311 -2 14802 163 33 15 chr5 40867901 40869079 -162216453 + L1MA3 LINE L1 6463 7618 -106 685 96 19 10 chr5 40869180 40869284 -162216248 + MER4A LTR ERV1 3 107 -557 * 1955 152 53 35 chr5 40869277 40869651 -162215881 + MER4A LTR ERV1 284 664 0 238 325 26 0 chr5 40870557 40870671 -162214861 + MER5B DNA MER1_type 6 122 -56 481 277 32 26 chr5 40870903 40871058 -162214474 - MER96 DNA MER1_type? 0 175 20 301 101 7 94 chr5 40872318 40872456 -162213076 + (TTTTTA)n Simple_repeat Simple_repeat 4 129 0 2314 85 7 0 chr5 40872852 40873146 -162212386 + AluSq SINE Alu 1 296 -17 390 74 0 0 chr5 40873984 40874038 -162211494 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 503 186 12 0 chr5 40874391 40874477 -162211055 - FRAM SINE Alu -17 159 73 300 246 34 51 chr5 40874592 40874710 -162210822 - HAL1 LINE L1 0 2507 2392 924 214 52 108 chr5 40874719 40875126 -162210406 + LTR52 LTR ERVL 1 384 -37 1399 238 50 1 chr5 40875146 40875537 -162209995 + HERVL74 LTR ERVL 1675 2078 -1478 1197 208 0 15 chr5 40875644 40875909 -162209623 + HERVL74 LTR ERVL 2249 2509 -1047 2205 184 40 38 chr5 40875909 40876221 -162209311 - MLT1D LTR MaLR 0 505 190 1691 76 31 5 chr5 40876221 40876445 -162209087 + MER30 DNA MER1_type 1 230 0 2205 184 40 38 chr5 40876445 40876636 -162208896 - MLT1D LTR MaLR -315 190 1 948 209 32 124 chr5 40876683 40877085 -162208447 - MLT1D-int LTR MaLR -44 1327 963 226 217 72 14 chr5 40877239 40877308 -162208224 - MLT1D-int LTR MaLR -486 885 813 842 133 0 0 chr5 40877315 40877435 -162208097 + AluSp/q SINE Alu 175 294 -19 2176 115 6 13 chr5 40877510 40877823 -162207709 - AluSx SINE Alu -1 311 1 238 88 0 0 chr5 40878294 40878328 -162207204 - Alu SINE Alu -267 34 1 281 306 0 0 chr5 40878328 40878413 -162207119 - MLT1D-int LTR MaLR -621 750 666 2601 186 22 7 chr5 40878413 40878876 -162206656 + MER70A LTR ERVL 1 470 -2 494 174 24 169 chr5 40878942 40879149 -162206383 - MLT1D-int LTR MaLR -711 660 484 512 261 18 58 chr5 40879151 40879377 -162206155 - MLT1D-int LTR MaLR -1089 282 66 189 0 0 0 chr5 40879809 40879830 -162205702 + (TC)n Simple_repeat Simple_repeat 2 22 0 1820 173 3 17 chr5 40879830 40880131 -162205401 - AluJb SINE Alu -15 297 1 1595 170 58 0 chr5 40880344 40880673 -162204859 + L1MB4 LINE L1 5663 6010 -173 3458 100 6 4 chr5 40880673 40881172 -162204360 + LTR3b LTR ERVK 1 500 0 429 210 134 105 chr5 40881406 40881644 -162203888 + HERVK3 LTR ERVK 28 272 -6971 183 80 0 0 chr5 40881646 40881671 -162203861 + (T)n Simple_repeat Simple_repeat 1 25 0 434 267 0 0 chr5 40881708 40881809 -162203723 + HERVK3 LTR ERVK 580 680 -6563 * 532 198 95 8 chr5 40881794 40881920 -162203612 + HERVK3 LTR ERVK 1317 1453 -5790 2324 160 1 35 chr5 40881927 40882458 -162203074 + HERVK14 LTR ERVK 5141 5572 -373 443 100 0 14 chr5 40882470 40882540 -162202992 + HERVK14 LTR ERVK 5816 5884 -61 3346 86 31 4 chr5 40882554 40883041 -162202491 + LTR3b LTR ERVK 1 500 0 653 169 64 47 chr5 40883041 40883164 -162202368 + L1MB4 LINE L1 6004 6132 -48 1867 133 0 58 chr5 40883164 40883472 -162202060 + AluSx SINE Alu 1 290 -22 653 169 64 47 chr5 40883472 40883520 -162202012 + L1MB4 LINE L1 6132 6178 -2 198 0 0 0 chr5 40883529 40883551 -162201981 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7621 23 0 0 chr5 40883551 40885014 -162200518 - L1PA3 LINE L1 -18 6137 4676 2265 115 0 3 chr5 40885051 40885347 -162200185 + AluSx SINE Alu 1 295 -17 1779 168 4 0 chr5 40885945 40886225 -162199307 - AluJb SINE Alu -27 285 5 237 333 44 54 chr5 40887959 40888163 -162197369 + MIR3 SINE MIR 5 206 -2 524 15 15 0 chr5 40890107 40890172 -162195360 + (GA)n Simple_repeat Simple_repeat 1 66 0 2265 108 0 3 chr5 40890315 40890612 -162194920 - AluSx SINE Alu -16 296 1 194 256 73 0 chr5 40890655 40890737 -162194795 - L2 LINE L2 -130 3183 3096 315 223 79 116 chr5 40890832 40890914 -162194618 + L1MC5 LINE L1 7633 7717 -244 1758 167 7 0 chr5 40890914 40891190 -162194342 + AluSg SINE Alu 1 278 -32 806 70 0 9 chr5 40891193 40891308 -162194224 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 315 223 79 116 chr5 40891308 40891513 -162194019 + L1MC5 LINE L1 7719 7913 -48 287 302 65 51 chr5 40891532 40891886 -162193646 - L1M4 LINE L1 -3603 2543 2185 409 214 11 0 chr5 40892004 40892093 -162193439 + MER70A LTR ERVL 380 469 -3 2248 107 0 16 chr5 40892824 40893134 -162192398 + AluSx SINE Alu 1 305 -7 183 269 30 45 chr5 40893273 40893340 -162192192 + L2 LINE L2 2428 2493 -821 186 195 0 73 chr5 40894608 40894649 -162190883 - L2 LINE L2 -96 3217 3180 303 273 38 30 chr5 40894660 40894792 -162190740 - L1MC4 LINE L1 -1272 6770 6638 * 2595 145 40 17 chr5 40894783 40895429 -162190103 - L1P4 LINE L1 -432 5734 5083 1283 268 67 28 chr5 40895452 40896175 -162189357 - L1PA12 LINE L1 -4708 2866 2179 10595 208 25 46 chr5 40896477 40897707 -162187825 - L1P4 LINE L1 -584 6285 5030 2091 79 72 0 chr5 40897707 40897986 -162187546 - AluSq SINE Alu -14 299 1 10595 208 25 46 chr5 40897986 40898012 -162187520 - L1P4 LINE L1 -1839 5030 5005 538 122 0 11 chr5 40898012 40898102 -162187430 - L1MA1 LINE L1 0 6302 6214 10595 208 25 46 chr5 40898102 40899009 -162186523 - L1P4 LINE L1 -1864 5005 4080 1655 196 0 0 chr5 40899009 40899284 -162186248 - AluJb SINE Alu -37 275 1 10595 208 25 46 chr5 40899284 40900813 -162184719 - L1P4 LINE L1 -2789 4080 2684 596 215 170 45 chr5 40900815 40901062 -162184470 - MER52A LTR ERV1 -1477 278 1 1078 268 52 63 chr5 40901062 40901661 -162183871 - L1PBb LINE L1 -4772 1431 759 1460 233 103 53 chr5 40902082 40903786 -162181746 - L1ME LINE L1 -396 5766 3965 381 188 0 0 chr5 40903860 40903945 -162181587 + (CA)n Simple_repeat Simple_repeat 2 86 0 2003 281 118 39 chr5 40904036 40905111 -162180421 + L1M3c LINE L1 219 1378 -4763 13322 148 20 30 chr5 40905118 40908346 -162177186 + L1P4 LINE L1 1011 4220 -3364 2680 121 15 6 chr5 40908330 40909021 -162176511 + L1P4 LINE L1 6416 7110 -489 * 409 259 159 7 chr5 40909502 40909742 -162175790 - L2 LINE L2 0 3313 2979 224 273 33 98 chr5 40909760 40909943 -162175589 - MIR SINE MIR -19 243 73 426 244 65 107 chr5 40909956 40910407 -162175125 - L1 LINE L1 -1870 4276 3840 1908 145 3 3 chr5 40910434 40910741 -162174791 + AluSx SINE Alu 1 307 0 359 342 8 0 chr5 40910751 40910868 -162174664 - L1ME3A LINE L1 -14 6156 6039 357 330 47 14 chr5 40910998 40911210 -162174322 - L1MEc LINE L1 -4240 2156 1938 949 232 91 117 chr5 40911245 40911939 -162173593 - L1ME3A LINE L1 -1 6169 5494 1179 113 20 10 chr5 40911940 40912142 -162173390 + LTR56 LTR ERV1 1 204 -241 1231 189 104 76 chr5 40912142 40912608 -162172924 - MER66A LTR ERV1 0 478 97 958 197 17 21 chr5 40912677 40912936 -162172596 + LTR56 LTR ERV1 201 432 -5 21 0 0 0 chr5 40912937 40912958 -162172574 + AT_rich Low_complexity Low_complexity 1 21 0 1784 168 17 13 chr5 40913023 40913321 -162172211 + AluJo SINE Alu 6 304 -8 241 268 41 0 chr5 40913354 40913451 -162172081 - L1ME3A LINE L1 -998 5361 5261 382 269 35 14 chr5 40913458 40913603 -162171929 - MLT1J2 LTR MaLR -298 152 5 2139 154 77 15 chr5 40913822 40913999 -162171533 + MSTA LTR MaLR 1 166 -262 2841 126 0 87 chr5 40913999 40914561 -162170971 - MER75 DNA T2_type -1 513 1 2139 154 77 15 chr5 40914561 40914786 -162170746 + MSTA LTR MaLR 166 428 0 455 290 62 0 chr5 40914904 40915049 -162170483 + LTR50 LTR ERVL 476 629 -166 2116 113 10 0 chr5 40917511 40917804 -162167728 + AluSq SINE Alu 1 296 -17 1712 165 3 21 chr5 40918001 40918292 -162167240 - AluJo SINE Alu -26 286 1 4703 174 93 30 chr5 40918293 40920376 -162165156 - L1MC2 LINE L1 -16 7123 4923 332 237 0 59 chr5 40920452 40920587 -162164945 - L1MC2 LINE L1 -2887 4054 3928 22 0 0 0 chr5 40920621 40920643 -162164889 + AT_rich Low_complexity Low_complexity 1 22 0 309 98 98 0 chr5 40920644 40920705 -162164827 - L1MA6 LINE L1 -5 6295 6229 24 32 0 0 chr5 40921647 40921678 -162163854 + AT_rich Low_complexity Low_complexity 1 31 0 239 254 17 164 chr5 40924532 40924709 -162160823 - MIR SINE MIR -40 222 72 41 0 0 0 chr5 40924979 40925020 -162160512 + AT_rich Low_complexity Low_complexity 1 41 0 338 230 79 40 chr5 40925046 40925172 -162160360 + MER94 DNA DNA 1 131 -3 560 216 9 9 chr5 40926829 40926940 -162158592 + MIR SINE MIR 5 115 -147 182 194 0 0 chr5 40926988 40927019 -162158513 + MIR SINE MIR 203 233 -29 601 76 93 8 chr5 40927983 40928101 -162157431 - MER3 DNA MER1_type 0 2596 2469 348 200 31 0 chr5 40928096 40928161 -162157371 - MER3 DNA MER1_type -103 106 40 * 381 367 120 8 chr5 40928575 40928818 -162156714 + L2 LINE L2 2511 2725 -547 1995 128 54 7 chr5 40928818 40929116 -162156416 - AluSx SINE Alu 0 312 1 381 367 120 8 chr5 40929116 40929350 -162156182 + L2 LINE L2 2725 3042 -230 2389 252 34 27 chr5 40929494 40930249 -162155283 - L1MC2 LINE L1 -4887 1536 806 244 321 99 23 chr5 40930379 40930510 -162155022 + L2 LINE L2 3171 3311 -2 705 306 130 9 chr5 40931453 40931776 -162153756 - L3 LINE CR1 -15 1562 1201 249 233 50 0 chr5 40931983 40932043 -162153489 - L2 LINE L2 0 3313 3251 382 331 156 29 chr5 40932445 40932907 -162152625 - L3 LINE CR1 -22 1555 977 368 326 174 6 chr5 40934090 40934268 -162151264 - MIR SINE MIR -7 255 48 194 204 0 19 chr5 40934339 40934393 -162151139 + GA-rich Low_complexity Low_complexity 2 54 0 1939 176 85 22 chr5 40935348 40935809 -162149723 + LTR2B LTR ERV1 1 490 0 21 57 0 0 chr5 40936511 40936546 -162148986 + AT_rich Low_complexity Low_complexity 1 35 0 387 252 26 35 chr5 40937922 40938037 -162147495 + L1MD2 LINE L1 5992 6105 -254 180 0 0 0 chr5 40938037 40938057 -162147475 + (CA)n Simple_repeat Simple_repeat 2 21 0 397 226 208 13 chr5 40938068 40938227 -162147305 + L1MD3 LINE L1 7787 7976 -19 2293 100 3 0 chr5 40938994 40939295 -162146237 - AluSg SINE Alu -8 302 1 1564 160 0 22 chr5 40939563 40939831 -162145701 + AluJb SINE Alu 47 308 -4 2895 201 96 14 chr5 40940279 40940970 -162144562 + L1MC4 LINE L1 7250 8006 -36 1800 90 9 128 chr5 40940970 40941313 -162144219 - AluSq SINE Alu 0 303 2 2895 201 96 14 chr5 40941313 40941354 -162144178 + L1MC4 LINE L1 8006 8042 0 2548 258 136 12 chr5 40941398 40942319 -162143213 + L2 LINE L2 612 1646 -1668 662 72 72 0 chr5 40942322 40942507 -162143025 - AluSc SINE Alu 0 359 166 9666 128 26 26 chr5 40942607 40943175 -162142357 - L1M1 LINE L1 -4872 2693 2126 1719 148 17 24 chr5 40943175 40943466 -162142066 - AluJb SINE Alu -23 289 1 9666 128 26 26 chr5 40943466 40944487 -162141045 - L1M1 LINE L1 -5439 2126 1105 750 130 35 0 chr5 40944485 40944600 -162140932 - L1M1 LINE L1 -7431 134 16 * 185 351 54 60 chr5 40945888 40946056 -162139476 + L2 LINE L2 2856 3022 -250 240 35 0 0 chr5 40946952 40946981 -162138551 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 934 152 0 0 chr5 40946998 40947136 -162138396 - AluJb SINE Alu -171 141 4 41 72 0 0 chr5 40948146 40948229 -162137303 + AT_rich Low_complexity Low_complexity 1 83 0 257 159 0 0 chr5 40948464 40948508 -162137024 - MIR SINE MIR -148 114 71 36 70 0 0 chr5 40948872 40948943 -162136589 + AT_rich Low_complexity Low_complexity 1 71 0 1748 148 86 12 chr5 40949899 40950223 -162135309 - MER7A DNA MER2_type 0 346 1 21 36 0 0 chr5 40950488 40950516 -162135016 + AT_rich Low_complexity Low_complexity 1 28 0 372 229 118 49 chr5 40950641 40950785 -162134747 - L2 LINE L2 -1 3312 3159 * 1193 253 164 35 chr5 40950765 40951307 -162134225 - L2 LINE L2 -992 2322 1711 2193 47 8 0 chr5 40951346 40951599 -162133933 + AluSc SINE Alu 1 255 -54 901 40 0 0 chr5 40951600 40951701 -162133831 + AluSc SINE Alu 155 255 -54 1095 84 14 0 chr5 40951702 40951920 -162133612 + AluSc SINE Alu 155 374 0 214 258 172 25 chr5 40951992 40952155 -162133377 - L2 LINE L2 -1805 1509 1323 9037 98 26 14 chr5 40952275 40953292 -162132240 + L1M1 LINE L1 2133 3176 -4389 3454 31 2 2 chr5 40953292 40953711 -162131821 + L1PA4 LINE L1 5734 6152 -3 9037 98 26 14 chr5 40953711 40954168 -162131364 + L1M1 LINE L1 3176 3626 -3939 2538 164 10 4 chr5 40954154 40954636 -162130896 + L1M1 LINE L1 4709 5193 -2372 * 29060 49 9 1 chr5 40954737 40959240 -162126292 + L1PA5 LINE L1 1619 6152 -2 21 57 0 0 chr5 40959809 40959844 -162125688 + AT_rich Low_complexity Low_complexity 1 35 0 2517 57 0 3 chr5 40959937 40960237 -162125295 + AluY SINE Alu 1 299 -12 199 311 48 29 chr5 40962746 40962849 -162122683 + L2 LINE L2 2652 2756 -558 307 279 12 47 chr5 40965596 40965682 -162119850 + MIR SINE MIR 41 123 -85 315 288 0 0 chr5 40966570 40966650 -162118882 + L1M1 LINE L1 5488 5567 -1998 34 24 0 0 chr5 40967035 40967076 -162118456 + AT_rich Low_complexity Low_complexity 1 41 0 306 221 13 13 chr5 40967877 40967954 -162117578 + L1ME4a LINE L1 5964 6040 -81 1471 266 177 19 chr5 40968079 40968987 -162116545 + L2 LINE L2 2258 3307 -6 180 296 37 37 chr5 40969250 40969331 -162116201 - MIR3 SINE MIR -24 184 104 963 252 27 0 chr5 40969417 40969639 -162115893 - MIR SINE MIR -2 260 33 406 274 122 10 chr5 40970082 40970279 -162115253 + L1ME LINE L1 5533 5751 -370 525 286 92 0 chr5 40971246 40971442 -162114090 - MER20 DNA MER1_type -4 215 2 284 266 117 0 chr5 40971570 40971664 -162113868 + MIR SINE MIR 47 151 -111 288 272 65 0 chr5 40973327 40973419 -162112113 + MIR SINE MIR 116 213 -49 685 264 64 24 chr5 40973613 40973863 -162111669 + MIR SINE MIR 3 262 0 2304 110 0 0 chr5 40974048 40974348 -162111184 - AluSq SINE Alu -13 300 1 290 221 35 70 chr5 40974827 40974913 -162110619 + L2 LINE L2 3190 3272 0 224 345 136 22 chr5 40975468 40975593 -162109939 - L2 LINE L2 -811 2503 2394 2050 121 10 7 chr5 40975593 40975899 -162109633 + AluSg SINE Alu 1 307 -3 224 345 136 22 chr5 40975899 40976222 -162109310 - L2 LINE L2 -920 2394 2004 350 276 238 9 chr5 40978203 40978413 -162107119 + MIR SINE MIR 5 262 0 954 207 80 4 chr5 40978449 40978700 -162106832 + L1MA9 LINE L1 6005 6274 -38 404 276 49 0 chr5 40979265 40979388 -162106144 - MIR SINE MIR -112 150 22 2392 78 31 65 chr5 40980379 40980765 -162104767 + THE1C LTR MaLR 1 373 -2 1140 247 149 18 chr5 40980829 40981448 -162104084 - L2 LINE L2 0 3313 2630 225 268 14 42 chr5 40981702 40981773 -162103759 - L2 LINE L2 -20 3252 3184 475 322 106 49 chr5 40982249 40982513 -162103019 - L2 LINE L2 0 3272 2994 283 331 73 68 chr5 40982914 40983162 -162102370 - L2 LINE L2 -2 3270 3022 505 296 65 15 chr5 40983298 40983497 -162102035 + MIR SINE MIR 28 236 -26 932 272 42 0 chr5 40983657 40983940 -162101592 - LTR16C LTR ERVL -6 485 191 256 283 0 0 chr5 40984317 40984377 -162101155 + L2 LINE L2 2992 3051 -262 260 207 52 0 chr5 40984419 40984477 -162101055 + L2 LINE L2 3249 3309 -4 342 232 72 0 chr5 40984708 40984777 -162100755 - MIR SINE MIR -169 93 20 383 210 180 10 chr5 40986210 40986310 -162099222 + L2 LINE L2 3197 3313 0 546 201 158 22 chr5 40986382 40986566 -162098966 - MER112 DNA MER1_type -18 242 34 199 319 124 44 chr5 40986605 40986718 -162098814 + MER5A DNA MER1_type 57 178 -11 644 253 103 15 chr5 40987974 40988179 -162097353 - MIR SINE MIR -26 236 16 593 104 31 0 chr5 40988289 40988385 -162097147 - U6 snRNA snRNA -7 100 2 209 171 0 0 chr5 40988385 40988420 -162097112 + (CCAA)n Simple_repeat Simple_repeat 3 37 0 231 228 18 18 chr5 40988590 40988647 -162096885 + L2 LINE L2 2508 2564 -750 1689 143 24 44 chr5 40988665 40988958 -162096574 + AluJo SINE Alu 1 287 -25 1598 261 37 29 chr5 40988976 40989564 -162095968 + L2 LINE L2 2639 3310 -3 285 29 0 0 chr5 40990258 40990292 -162095240 + (TA)n Simple_repeat Simple_repeat 2 35 0 2282 100 3 3 chr5 40993581 40993881 -162091651 - AluSp SINE Alu -13 300 1 533 261 121 10 chr5 40993893 40994100 -162091432 + MLT1J LTR MaLR 205 434 -77 585 222 167 0 chr5 40994217 40994379 -162091153 + L2 LINE L2 3125 3313 0 586 307 50 29 chr5 40994722 40994963 -162090569 + MIR SINE MIR 14 259 -3 718 246 62 11 chr5 40995047 40995307 -162090225 - L1MCc LINE L1 -6120 303 31 234 91 0 0 chr5 40996117 40996150 -162089382 + (CAT)n Simple_repeat Simple_repeat 2 34 0 265 242 0 45 chr5 40996346 40996412 -162089120 + MLT1E2 LTR MaLR 1 63 -563 525 44 0 0 chr5 40996519 40996587 -162088945 + (CA)n Simple_repeat Simple_repeat 1 68 0 519 105 19 57 chr5 40996600 40996705 -162088827 + L1MA9 LINE L1 6176 6276 -36 1186 243 39 41 chr5 40996718 40996829 -162088703 + MLT1E2 LTR MaLR 290 400 -226 1551 185 3 25 chr5 40996829 40997115 -162088417 + AluJo SINE Alu 1 280 -32 1186 243 39 41 chr5 40997115 40997341 -162088191 + MLT1E2 LTR MaLR 400 626 0 247 242 11 11 chr5 40997639 40997730 -162087802 - L1ME LINE L1 -265 5856 5766 729 140 9 0 chr5 40997981 40998095 -162087437 + AluJb SINE Alu 1 115 -197 539 302 44 28 chr5 40998314 40998562 -162086970 - L2 LINE L2 -1 3312 3061 2158 122 0 3 chr5 40998797 40999100 -162086432 - AluSq SINE Alu -6 307 6 2509 68 0 3 chr5 41000481 41000792 -162084740 + AluY SINE Alu 1 310 -1 22 0 0 0 chr5 41001012 41001034 -162084498 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 41001170 41001198 -162084334 + AT_rich Low_complexity Low_complexity 1 28 0 197 214 48 71 chr5 41002525 41002609 -162082923 + L2 LINE L2 2257 2338 -976 329 312 33 107 chr5 41002613 41002950 -162082582 + L2 LINE L2 1164 1475 -1839 7691 168 122 23 chr5 41003005 41004602 -162080930 - MER52A LTR ERV1 0 1755 1 1108 223 54 26 chr5 41004791 41005177 -162080355 - L1ME3 LINE L1 -1 6161 5765 484 300 111 62 chr5 41005294 41005761 -162079771 + L2 LINE L2 1938 2427 -887 393 282 0 0 chr5 41007424 41007527 -162078005 - MER94 DNA DNA -31 103 1 206 335 144 46 chr5 41007854 41008048 -162077484 + L2 LINE L2 2702 2914 -400 642 227 77 31 chr5 41008132 41008326 -162077206 - MIR SINE MIR 0 262 60 782 185 40 0 chr5 41008341 41008492 -162077040 - MER58B DNA MER1_type 0 341 185 314 286 68 61 chr5 41008558 41008684 -162076848 + L2 LINE L2 2916 3045 -227 2391 131 98 14 chr5 41008684 41009113 -162076419 - MLT1C LTR MaLR -2 465 1 314 286 68 61 chr5 41009113 41009133 -162076399 + L2 LINE L2 3045 3063 -209 210 71 0 0 chr5 41009160 41009188 -162076344 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 25 83 0 0 chr5 41009380 41009440 -162076092 + AT_rich Low_complexity Low_complexity 1 60 0 3460 90 108 12 chr5 41009967 41010655 -162074877 - L1MA3 LINE L1 -111 6194 5400 583 161 124 0 chr5 41010656 41010793 -162074739 + L1 LINE L1 4315 4468 -1678 7400 166 28 12 chr5 41010806 41012357 -162073175 - L1MA3 LINE L1 -768 5378 3803 20270 76 7 0 chr5 41012459 41015274 -162070258 - L1P LINE L1 -3302 2844 11 572 239 208 23 chr5 41015614 41016090 -162069442 - L1MC5 LINE L1 -66 7895 7332 826 199 70 11 chr5 41016099 41016285 -162069247 + MER20 DNA MER1_type 6 202 -17 2231 96 13 7 chr5 41018119 41018421 -162067111 + AluSg SINE Alu 1 304 -6 377 271 85 25 chr5 41018756 41018874 -162066658 + L2 LINE L2 3188 3312 -1 405 196 116 87 chr5 41019123 41019296 -162066236 - MLT1F LTR MaLR -364 178 1 1077 191 17 9 chr5 41019417 41019648 -162065884 + MLT1F1 LTR MaLR 333 565 -2 270 254 141 7 chr5 41020145 41020287 -162065245 - L2 LINE L2 -2 3311 3151 329 242 84 11 chr5 41021122 41021217 -162064315 - L2 LINE L2 -423 2891 2790 358 196 43 33 chr5 41021220 41021312 -162064220 + MER81 DNA DNA 1 93 -21 5187 66 0 0 chr5 41022106 41022756 -162062776 + L1PA6 LINE L1 5494 6143 -11 22 35 0 0 chr5 41022756 41022785 -162062747 + AT_rich Low_complexity Low_complexity 1 29 0 253 322 178 41 chr5 41022866 41023260 -162062272 - L2 LINE L2 -723 2591 2144 5754 127 41 13 chr5 41025133 41026350 -162059182 + L1MA4A LINE L1 5045 6290 -13 394 291 252 4 chr5 41026540 41026774 -162058758 + L1MC4a LINE L1 5667 5958 -1850 1017 278 108 10 chr5 41027633 41028039 -162057493 + MLT1J2 LTR MaLR 5 450 0 282 301 118 33 chr5 41028199 41028352 -162057180 + MIR SINE MIR 53 218 -44 497 325 52 5 chr5 41029070 41029264 -162056268 + MIR SINE MIR 20 222 -40 574 240 56 15 chr5 41029844 41030040 -162055492 + L1MC5 LINE L1 7724 7927 -34 22 56 0 0 chr5 41030343 41030379 -162055153 + AT_rich Low_complexity Low_complexity 1 36 0 1618 229 66 92 chr5 41031420 41032563 -162052969 - L1ME3A LINE L1 -5 6165 5050 1146 147 5 5 chr5 41034321 41034505 -162051027 + MER2 DNA MER2_type 7 190 -155 737 262 94 12 chr5 41034604 41034848 -162050684 - MLT1J2 LTR MaLR -132 318 55 2284 89 7 0 chr5 41034964 41035255 -162050277 + AluSq SINE Alu 1 293 -20 1606 228 102 54 chr5 41036133 41036650 -162048882 - MLT1F LTR MaLR 0 542 1 251 200 200 0 chr5 41037791 41037861 -162047671 + MER103 DNA DNA 12 95 -71 1411 109 5 5 chr5 41037877 41038078 -162047454 - AluSx SINE Alu -17 295 95 1607 87 0 0 chr5 41038078 41038286 -162047246 + MER11B LTR ERVK 6 213 -1023 835 87 0 0 chr5 41038312 41038416 -162047116 - AluSx SINE Alu -208 104 1 308 302 176 11 chr5 41038725 41038907 -162046625 + L2 LINE L2 2534 2745 -569 305 262 233 0 chr5 41039252 41039355 -162046177 + L2 LINE L2 3182 3308 -5 207 0 0 0 chr5 41040698 41040721 -162044811 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 358 361 119 23 chr5 41041395 41041968 -162043564 + L2 LINE L2 2002 2629 -685 25 0 0 0 chr5 41042391 41042416 -162043116 + AT_rich Low_complexity Low_complexity 1 25 0 604 239 40 40 chr5 41043388 41043564 -162041968 - L2 LINE L2 -974 2340 2165 1675 183 3 23 chr5 41044234 41044535 -162040997 + AluJb SINE Alu 2 296 -16 650 241 0 0 chr5 41044593 41044726 -162040806 + FLAM_A SINE Alu 1 133 0 1004 50 0 36 chr5 41045191 41045330 -162040202 + AluY SINE Alu 178 311 0 29 28 0 0 chr5 41045475 41045511 -162040021 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 41045957 41045979 -162039553 + AT_rich Low_complexity Low_complexity 1 22 0 275 210 258 16 chr5 41047235 41047359 -162038173 + MER20 DNA MER1_type 66 219 0 247 321 43 50 chr5 41048587 41048727 -162036805 + MER5A DNA MER1_type 21 159 -30 * 314 347 111 0 chr5 41048725 41048869 -162036663 - L2 LINE L2 -547 2767 2608 214 322 0 0 chr5 41050514 41050573 -162034959 - MIR3 SINE MIR -15 193 135 344 296 161 60 chr5 41052165 41052748 -162032784 + L1M2 LINE L1 758 1360 -5489 487 257 50 14 chr5 41053681 41053821 -162031711 + MIR3 SINE MIR 64 208 0 464 321 105 54 chr5 41054386 41054993 -162030539 + L2 LINE L2 1565 2202 -1112 430 313 168 11 chr5 41055005 41055184 -162030348 + MIR SINE MIR 48 254 -8 418 324 188 16 chr5 41055326 41055693 -162029839 - L2 LINE L2 -25 3247 2818 2251 92 0 7 chr5 41055807 41056099 -162029433 - AluSc SINE Alu -17 292 3 299 300 60 1 chr5 41056102 41056252 -162029280 + L1ME4a LINE L1 5336 5492 -670 1298 174 4 64 chr5 41056350 41056521 -162029011 - AluJb SINE Alu -11 301 152 2238 82 7 7 chr5 41056521 41056815 -162028717 - AluSg1 SINE Alu -15 294 1 1298 174 4 64 chr5 41056815 41056924 -162028608 - AluJb SINE Alu -160 152 38 1855 119 3 127 chr5 41057242 41057627 -162027905 + MER1B DNA MER1_type 1 337 0 24 32 0 0 chr5 41057800 41057831 -162027701 + AT_rich Low_complexity Low_complexity 1 31 0 2193 104 0 16 chr5 41058385 41058692 -162026840 + AluSx SINE Alu 3 304 -8 212 293 0 28 chr5 41058894 41059000 -162026532 + CT-rich Low_complexity Low_complexity 2 104 0 28 29 0 0 chr5 41059222 41059257 -162026275 + AT_rich Low_complexity Low_complexity 1 35 0 374 248 55 9 chr5 41059299 41059408 -162026124 - MARNA DNA Mariner -65 521 408 360 315 92 0 chr5 41059493 41059677 -162025855 - MARNA DNA Mariner -338 248 48 195 328 75 0 chr5 41059800 41059867 -162025665 - L2 LINE L2 0 3313 3242 26 50 0 0 chr5 41060485 41060525 -162025007 + AT_rich Low_complexity Low_complexity 1 40 0 29 47 0 0 chr5 41061021 41061064 -162024468 + AT_rich Low_complexity Low_complexity 1 43 0 334 306 72 27 chr5 41062948 41063059 -162022473 - MIR SINE MIR -59 149 34 302 279 0 13 chr5 41063262 41063341 -162022191 - MIR SINE MIR -104 158 81 616 262 107 39 chr5 41064859 41065244 -162020288 + L1ME4a LINE L1 5709 6119 -2 593 294 44 18 chr5 41065865 41066093 -162019439 - MIR SINE MIR 0 262 29 272 259 35 35 chr5 41066948 41067033 -162018499 - MER5A DNA MER1_type -21 168 84 38 61 0 0 chr5 41068119 41068185 -162017347 + AT_rich Low_complexity Low_complexity 1 66 0 25 31 0 0 chr5 41068359 41068391 -162017141 + AT_rich Low_complexity Low_complexity 1 32 0 22 70 0 0 chr5 41068715 41068758 -162016774 + AT_rich Low_complexity Low_complexity 1 43 0 317 271 139 16 chr5 41069183 41069305 -162016227 - MIR SINE MIR -97 165 29 541 206 206 7 chr5 41069600 41069741 -162015791 - MER5B DNA MER1_type -2 176 8 1991 138 3 3 chr5 41070087 41070383 -162015149 + AluSx SINE Alu 5 300 -12 2175 88 0 27 chr5 41070866 41071163 -162014369 + AluY SINE Alu 13 301 -10 22 70 0 0 chr5 41071457 41071500 -162014032 + AT_rich Low_complexity Low_complexity 1 43 0 595 211 105 11 chr5 41072902 41073081 -162012451 - MIR SINE MIR -4 258 63 181 309 0 0 chr5 41073372 41073414 -162012118 - L3 LINE CR1 -12 1565 1524 21 36 0 0 chr5 41074035 41074063 -162011469 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr5 41074116 41074147 -162011385 + AT_rich Low_complexity Low_complexity 1 31 0 1285 179 160 0 chr5 41074346 41074609 -162010923 - AluJb SINE Alu -7 305 1 21 36 0 0 chr5 41075939 41075967 -162009565 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 41076310 41076336 -162009196 + AT_rich Low_complexity Low_complexity 1 26 0 2436 74 0 13 chr5 41076473 41076783 -162008749 + AluSq SINE Alu 1 306 -7 2025 137 3 3 chr5 41077540 41077839 -162007693 - AluSx SINE Alu -13 299 1 2337 97 0 6 chr5 41078009 41078320 -162007212 + AluSc SINE Alu 1 309 0 1964 132 14 10 chr5 41079496 41079792 -162005740 - AluSg SINE Alu -13 297 1 401 256 12 61 chr5 41079814 41079978 -162005554 - L1ME4a LINE L1 -1 6120 5965 557 89 0 0 chr5 41080820 41080899 -162004633 - MADE1 DNA Mariner 0 80 2 336 311 22 22 chr5 41081025 41081160 -162004372 - MER5A DNA MER1_type 0 189 55 1511 201 0 26 chr5 41081274 41081578 -162003954 - AluJo SINE Alu -15 297 2 22 35 0 0 chr5 41082580 41082609 -162002923 + AT_rich Low_complexity Low_complexity 1 29 0 522 274 38 65 chr5 41082786 41082972 -162002560 + MIR SINE MIR 12 192 -70 21 0 0 0 chr5 41082980 41083001 -162002531 + AT_rich Low_complexity Low_complexity 1 21 0 246 306 122 27 chr5 41083047 41083194 -162002338 - MER117 DNA MER1_type -36 161 1 2048 124 10 22 chr5 41083409 41083723 -162001809 - AluSq SINE Alu -3 310 1 345 240 27 0 chr5 41084185 41084260 -162001272 - L2 LINE L2 0 3272 3196 21 0 0 0 chr5 41084497 41084518 -162001014 + AT_rich Low_complexity Low_complexity 1 21 0 753 309 55 51 chr5 41084550 41084618 -162000914 - L2 LINE L2 0 3313 3247 1871 146 103 11 chr5 41084618 41084987 -162000545 + MER57A LTR ERV1 1 403 0 753 309 55 51 chr5 41084987 41085632 -161999900 - L2 LINE L2 -66 3247 2588 353 298 53 15 chr5 41086069 41086200 -161999332 - MIR SINE MIR -124 138 3 527 230 34 69 chr5 41086326 41086530 -161999002 + HAL1 LINE L1 22 218 -2289 492 250 64 64 chr5 41086518 41086738 -161998794 + HAL1 LINE L1 2288 2507 0 * 629 165 288 0 chr5 41087115 41087285 -161998247 + MER44D DNA MER2_type 32 520 -89 225 0 0 0 chr5 41088180 41088205 -161997327 + (TC)n Simple_repeat Simple_repeat 2 26 0 378 0 0 0 chr5 41088222 41088264 -161997268 + (TG)n Simple_repeat Simple_repeat 1 42 0 2211 118 27 30 chr5 41088544 41088909 -161996623 - THE1B LTR MaLR 0 364 1 466 196 59 20 chr5 41089105 41089207 -161996325 + MER5A DNA MER1_type 4 109 -80 721 297 50 0 chr5 41091875 41092094 -161993438 + MIR SINE MIR 18 247 -15 304 339 25 0 chr5 41092146 41092264 -161993268 - MIR SINE MIR -67 141 21 1794 116 0 0 chr5 41093906 41094138 -161991394 - AluSx SINE Alu -79 233 2 333 0 0 0 chr5 41094321 41094358 -161991174 + (CA)n Simple_repeat Simple_repeat 2 38 0 1066 78 0 0 chr5 41094772 41094900 -161990632 - AluSp/q SINE Alu -18 295 168 328 281 34 11 chr5 41095849 41095938 -161989594 + MIR SINE MIR 161 251 -11 258 333 94 0 chr5 41096062 41096158 -161989374 - L3 LINE CR1 -5 1572 1468 286 314 32 19 chr5 41097104 41097260 -161988272 + L2 LINE L2 2752 2909 -405 744 173 20 89 chr5 41097260 41097462 -161988070 + MER5A DNA MER1_type 1 188 -1 621 256 69 5 chr5 41097553 41097756 -161987776 + L2 LINE L2 2927 3142 -171 1791 110 41 21 chr5 41097778 41098068 -161987464 - MER1B DNA MER1_type -7 332 37 431 220 94 63 chr5 41098077 41098236 -161987296 + L2 LINE L2 3150 3313 0 194 262 24 107 chr5 41098666 41098750 -161986782 + MIR SINE MIR 66 142 -66 4055 222 90 11 chr5 41098807 41100900 -161984632 - L1ME2 LINE L1 -2 6162 3906 407 228 50 67 chr5 41100903 41101008 -161984524 - L1ME2 LINE L1 -2776 3370 3268 2029 140 20 0 chr5 41101008 41101300 -161984232 - AluSx SINE Alu -14 298 1 407 228 50 67 chr5 41101300 41101374 -161984158 - L1ME2 LINE L1 -2878 3268 3194 2419 63 0 44 chr5 41101510 41101825 -161983707 - AluSc SINE Alu -8 301 1 1416 159 60 3 chr5 41101829 41102112 -161983420 - L1MB2 LINE L1 -2 6169 5871 198 136 0 0 chr5 41102112 41102156 -161983376 + (T)n Simple_repeat Simple_repeat 1 44 0 20515 34 0 0 chr5 41102180 41105436 -161980096 - L1PA3 LINE L1 0 6155 2899 526 128 20 0 chr5 41105436 41105528 -161980004 - L1MB2 LINE L1 -305 5878 5782 257 82 16 49 chr5 41105528 41105589 -161979943 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 302 242 11 63 chr5 41105589 41105684 -161979848 - L1MC4 LINE L1 -1339 6703 6614 336 133 27 13 chr5 41105687 41105762 -161979770 + (TA)n Simple_repeat Simple_repeat 1 76 0 1663 183 11 57 chr5 41105770 41105982 -161979550 - L1MB2 LINE L1 -390 5793 5604 2671 89 13 5 chr5 41105982 41106354 -161979178 + THE1C LTR MaLR 1 375 0 1663 183 11 57 chr5 41106354 41106507 -161979025 - L1MB2 LINE L1 -579 5604 5445 1687 258 82 48 chr5 41106594 41107180 -161978352 + MER21B LTR ERV1 126 731 -132 290 262 0 24 chr5 41107354 41107438 -161978094 + MIR SINE MIR 73 154 -108 1513 210 82 8 chr5 41107445 41107811 -161977721 + MLT2D LTR ERVL 2 394 -20 2130 146 29 29 chr5 41107821 41108205 -161977327 - Tigger2a DNA MER2_type -50 384 1 276 30 0 0 chr5 41108208 41108241 -161977291 + (CA)n Simple_repeat Simple_repeat 2 34 0 257 139 0 0 chr5 41108241 41108277 -161977255 + MLT2D LTR ERVL 472 510 -5 258 305 42 59 chr5 41108571 41108689 -161976843 + L2 LINE L2 3157 3272 0 2233 112 0 3 chr5 41108806 41109109 -161976423 + AluSg SINE Alu 7 308 -2 2770 93 42 3 chr5 41109681 41110066 -161975466 + MLT2A1 LTR ERVL 1 400 -44 213 196 0 0 chr5 41110072 41110118 -161975414 + (TA)n Simple_repeat Simple_repeat 2 47 0 * 279 0 0 0 chr5 41110117 41110148 -161975384 + (TG)n Simple_repeat Simple_repeat 2 32 0 342 87 0 0 chr5 41110148 41110194 -161975338 + MLT2A1 LTR ERVL 408 453 0 1110 266 29 44 chr5 41110325 41110806 -161974726 + L1ME4a LINE L1 5567 6040 -81 1081 203 56 65 chr5 41113900 41114328 -161971204 - L1MC5 LINE L1 -48 7913 7490 180 280 40 0 chr5 41114517 41114567 -161970965 + MIR SINE MIR 84 135 -73 308 305 92 30 chr5 41114754 41114885 -161970647 - MER5A DNA MER1_type -5 184 46 218 173 0 19 chr5 41117367 41117419 -161968113 + CT-rich Low_complexity Low_complexity 1 51 0 591 272 5 11 chr5 41117470 41117654 -161967878 + L1MC5 LINE L1 7735 7917 -44 1644 210 17 14 chr5 41118117 41118465 -161967067 - MLT1A1 LTR MaLR 0 365 17 315 0 0 0 chr5 41118649 41118684 -161966848 + (CA)n Simple_repeat Simple_repeat 1 35 0 252 298 51 51 chr5 41120212 41120370 -161965162 - MLT1J2 LTR MaLR -21 429 272 1158 152 71 9 chr5 41120581 41120805 -161964727 - AluJb SINE Alu -54 258 21 1070 235 167 46 chr5 41121042 41121587 -161963945 + MLT1L LTR MaLR 5 615 0 1329 231 100 39 chr5 41121663 41122121 -161963411 + MLT1D LTR MaLR 20 505 0 468 0 0 0 chr5 41122296 41122348 -161963184 + (TG)n Simple_repeat Simple_repeat 2 53 0 227 302 0 121 chr5 41122753 41122869 -161962663 - L2 LINE L2 -219 3053 2952 545 261 135 80 chr5 41123269 41123706 -161961826 + MLT1L LTR MaLR 145 605 -10 338 359 19 0 chr5 41123712 41123818 -161961714 - L2 LINE L2 -27 3245 3138 * 492 261 37 78 chr5 41123803 41124021 -161961511 + MIR SINE MIR 31 239 -23 1512 268 83 52 chr5 41124176 41126098 -161959434 - L1ME LINE L1 -3235 2980 1042 9881 133 17 14 chr5 41126251 41128981 -161956551 - L1MA2 LINE L1 -2 7721 4979 2468 141 32 2 chr5 41128981 41129386 -161956146 + MER75 DNA T2_type 1 417 -97 2912 94 14 48 chr5 41129386 41129887 -161955645 + L1M1 LINE L1 2460 2943 -4622 686 123 0 18 chr5 41129887 41130001 -161955531 + MER75 DNA T2_type 393 504 0 6007 173 22 5 chr5 41130001 41131777 -161953755 - L1MA2 LINE L1 -2583 4982 3174 3194 24 0 0 chr5 41131775 41132187 -161953345 - L1PA2 LINE L1 -756 5390 4979 * 6733 14 3 0 chr5 41132187 41132955 -161952577 + L1PA2 LINE L1 5384 6155 0 10009 162 54 39 chr5 41132974 41135747 -161949785 - L1MA2 LINE L1 -4376 3189 15 22 0 0 0 chr5 41135802 41135824 -161949708 + AT_rich Low_complexity Low_complexity 1 22 0 301 344 45 19 chr5 41136081 41136235 -161949297 - L1ME LINE L1 -5901 304 147 181 329 145 66 chr5 41136819 41136971 -161948561 + L2 LINE L2 2924 3087 -185 227 222 0 14 chr5 41137106 41137178 -161948354 + GA-rich Low_complexity Low_complexity 2 72 0 467 261 67 42 chr5 41137481 41137646 -161947886 + MIR SINE MIR 28 196 -66 492 48 0 0 chr5 41137732 41137795 -161947737 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 387 0 0 0 chr5 41137812 41137855 -161947677 + (TG)n Simple_repeat Simple_repeat 2 44 0 185 326 76 30 chr5 41138101 41138233 -161947299 + L2 LINE L2 3176 3313 0 2600 34 9 0 chr5 41139479 41139801 -161945731 - LTR17 LTR ERV1 -455 325 1 2218 59 7 0 chr5 41139801 41140091 -161945441 - HERV17 LTR ERV1 0 8626 8335 259 95 0 0 chr5 41140078 41140120 -161945412 - HERV17 LTR ERV1 -1075 7551 7510 * 9972 39 0 0 chr5 41140113 41141335 -161944197 - HERV17 LTR ERV1 -2607 6019 4798 * 16164 43 3 1 chr5 41141334 41143345 -161942187 - HERV17 LTR ERV1 -4661 3965 1952 3903 76 0 6 chr5 41143374 41143902 -161941630 - LTR17 LTR ERV1 0 780 256 774 247 6 17 chr5 41144006 41144184 -161941348 - MER5B DNA MER1_type 0 178 3 2348 34 41 10 chr5 41144810 41145103 -161940429 - AluY SINE Alu -9 302 1 546 155 15 110 chr5 41145611 41145714 -161939818 + Charlie5 DNA MER1_type 2444 2520 -104 2208 96 10 7 chr5 41145714 41146006 -161939526 - AluSx SINE Alu -19 293 1 546 155 15 110 chr5 41146006 41146102 -161939430 + Charlie5 DNA MER1_type 2520 2624 0 280 84 0 127 chr5 41147444 41147515 -161938017 + L1MA1 LINE L1 6244 6305 0 881 257 113 19 chr5 41148364 41148675 -161936857 + Zaphod DNA AcHobo 1 340 -3691 598 163 23 0 chr5 41148685 41148814 -161936718 + Zaphod DNA AcHobo 587 718 -3313 311 139 67 129 chr5 41148817 41149011 -161936521 + Zaphod DNA AcHobo 828 1009 -3022 * 1220 202 125 20 chr5 41148979 41149380 -161936152 + Zaphod DNA AcHobo 3589 4031 0 392 322 46 35 chr5 41150027 41150201 -161935331 + MER5B DNA MER1_type 1 176 -2 292 231 192 0 chr5 41150529 41150607 -161934925 - L2 LINE L2 0 3272 3180 229 273 20 10 chr5 41150692 41150791 -161934741 - L1MCa LINE L1 -4857 1569 1470 21 0 0 0 chr5 41150961 41150982 -161934550 + AT_rich Low_complexity Low_complexity 1 21 0 392 161 0 11 chr5 41151082 41151169 -161934363 + CT-rich Low_complexity Low_complexity 4 89 0 2219 261 67 13 chr5 41151223 41151878 -161933654 + L1MEc LINE L1 44 743 -5653 2691 105 5 0 chr5 41151878 41152251 -161933281 + THE1C LTR MaLR 1 375 0 2219 261 67 13 chr5 41152251 41152307 -161933225 + L1MEc LINE L1 743 794 -5602 1967 118 60 0 chr5 41152309 41152623 -161932909 - L1P4 LINE L1 -513 5655 5323 3156 83 2 0 chr5 41152623 41153037 -161932495 + L1PA10 LINE L1 5746 6166 -2 853 257 73 38 chr5 41153053 41153586 -161931946 + L1MEc LINE L1 783 1334 -5062 260 336 0 0 chr5 41153596 41153742 -161931790 + L1MEc LINE L1 1407 1552 -4844 3326 194 20 59 chr5 41153763 41154745 -161930787 + L1M4 LINE L1 3954 4897 -1249 1474 225 11 14 chr5 41154745 41155100 -161930432 - MLT1A1 LTR MaLR -11 354 1 1397 196 43 15 chr5 41155103 41155501 -161930031 + L1M4 LINE L1 4897 5305 -841 522 201 79 32 chr5 41205840 41206029 -161879503 + L1M3c LINE L1 1181 1378 -4763 13195 174 22 30 chr5 41206036 41209258 -161876274 + L1P4 LINE L1 1011 4220 -3364 2816 121 15 6 chr5 41209242 41209933 -161875599 + L1P4 LINE L1 6416 7110 -489 * 411 259 159 7 chr5 41210414 41210654 -161874878 - L2 LINE L2 0 3313 2979 207 279 33 98 chr5 41210672 41210855 -161874677 - MIR SINE MIR -19 243 73 555 252 54 99 chr5 41210892 41211317 -161874215 - L1M4 LINE L1 -1901 4245 3840 1938 145 3 0 chr5 41211344 41211650 -161873882 + AluSx SINE Alu 1 307 0 228 342 8 0 chr5 41211660 41211777 -161873755 - L1ME3A LINE L1 -14 6156 6039 370 325 47 14 chr5 41211907 41212119 -161873413 - L1MEc LINE L1 -4240 2156 1938 1085 224 94 118 chr5 41212154 41212847 -161872685 - L1ME3A LINE L1 -1 6169 5494 1233 109 25 10 chr5 41212848 41213049 -161872483 + LTR56 LTR ERV1 1 204 -241 1324 189 104 76 chr5 41213049 41213515 -161872017 - MER66A LTR ERV1 0 478 97 834 164 13 66 chr5 41213584 41213852 -161871680 + LTR56 LTR ERV1 201 432 -5 1753 168 17 13 chr5 41213942 41214240 -161871292 + AluJo SINE Alu 6 304 -8 261 268 41 0 chr5 41214273 41214370 -161871162 - L1ME3A LINE L1 -998 5361 5261 430 269 35 14 chr5 41214377 41214522 -161871010 - MLT1J2 LTR MaLR -298 152 5 989 167 58 0 chr5 41214741 41214915 -161870617 + MSTA LTR MaLR 1 184 -244 2606 127 0 93 chr5 41215022 41215528 -161870004 - MER75 DNA T2_type -55 459 1 1135 142 80 50 chr5 41215528 41215767 -161869765 + MSTA LTR MaLR 183 428 0 503 335 45 0 chr5 41215885 41216085 -161869447 + LTR50 LTR ERVL 476 684 -111 200 309 15 0 chr5 41217069 41217137 -161868395 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 2095 113 10 0 chr5 41218490 41218783 -161866749 + AluSq SINE Alu 1 296 -17 324 172 0 45 chr5 41219047 41219119 -161866413 - Alu SINE Alu -256 46 1 4886 175 93 30 chr5 41219119 41221175 -161864357 - L1MC2 LINE L1 -43 7096 4923 339 231 8 60 chr5 41221251 41221385 -161864147 - L1MC2 LINE L1 -2887 4054 3928 22 0 0 0 chr5 41221419 41221441 -161864091 + AT_rich Low_complexity Low_complexity 1 22 0 314 98 98 0 chr5 41221442 41221503 -161864029 - L1MA6 LINE L1 -5 6295 6229 24 32 0 0 chr5 41222445 41222476 -161863056 + AT_rich Low_complexity Low_complexity 1 31 0 239 254 17 164 chr5 41225181 41225358 -161860174 - MIR SINE MIR -40 222 72 560 216 9 9 chr5 41225975 41226086 -161859446 + MIR SINE MIR 5 115 -147 182 194 0 0 chr5 41226134 41226165 -161859367 + MIR SINE MIR 203 233 -29 601 76 93 8 chr5 41227128 41227246 -161858286 - MER3 DNA MER1_type 0 2596 2469 348 200 31 0 chr5 41227241 41227306 -161858226 - MER3 DNA MER1_type -103 106 40 * 300 398 54 0 chr5 41227727 41227948 -161857584 + L2 LINE L2 2511 2743 -571 1822 115 0 21 chr5 41227970 41228249 -161857283 - AluSg SINE Alu 0 310 38 800 242 181 47 chr5 41228343 41228769 -161856763 + L2 LINE L2 1711 2193 -1121 2300 256 35 25 chr5 41228871 41229586 -161855946 - L1MC2 LINE L1 -4896 1527 806 244 321 99 23 chr5 41229716 41229847 -161855685 + L2 LINE L2 3171 3311 -2 705 306 130 9 chr5 41230791 41231114 -161854418 - L3 LINE CR1 -15 1562 1201 249 233 50 0 chr5 41231321 41231381 -161854151 - L2 LINE L2 0 3313 3251 382 331 156 29 chr5 41231783 41232245 -161853287 - L3 LINE CR1 -22 1555 977 368 326 174 6 chr5 41233433 41233611 -161851921 - MIR SINE MIR -7 255 48 194 204 0 19 chr5 41233682 41233736 -161851796 + GA-rich Low_complexity Low_complexity 2 54 0 1939 176 85 22 chr5 41234676 41235137 -161850395 + LTR2B LTR ERV1 1 490 0 21 57 0 0 chr5 41235839 41235874 -161849658 + AT_rich Low_complexity Low_complexity 1 35 0 2293 100 3 0 chr5 41237501 41237802 -161847730 - AluSg SINE Alu -8 302 1 1564 160 0 22 chr5 41238070 41238338 -161847194 + AluJb SINE Alu 47 308 -4 2895 201 96 14 chr5 41238786 41239477 -161846055 + L1MC4 LINE L1 7250 8006 -36 1800 90 9 128 chr5 41239477 41239820 -161845712 - AluSq SINE Alu 0 303 2 2895 201 96 14 chr5 41239820 41239861 -161845671 + L1MC4 LINE L1 8006 8042 0 2521 259 137 11 chr5 41239905 41240824 -161844708 + L2 LINE L2 612 1646 -1668 1094 84 14 0 chr5 41240827 41241030 -161844502 - AluSc SINE Alu 0 359 155 901 40 0 0 chr5 41241031 41241132 -161844400 - AluSc SINE Alu -54 255 155 229 69 0 0 chr5 41241133 41241162 -161844370 - Alu SINE Alu -44 255 227 217 303 13 53 chr5 41241262 41241338 -161844194 + L2 LINE L2 2250 2322 -992 * 372 229 118 49 chr5 41241318 41241462 -161844070 + L2 LINE L2 3159 3312 -1 21 36 0 0 chr5 41241587 41241615 -161843917 + AT_rich Low_complexity Low_complexity 1 28 0 1748 148 86 12 chr5 41241880 41242204 -161843328 + MER7A DNA MER2_type 1 346 0 36 70 0 0 chr5 41243161 41243232 -161842300 + AT_rich Low_complexity Low_complexity 1 71 0 257 159 0 0 chr5 41243599 41243643 -161841889 + MIR SINE MIR 71 114 -148 41 72 0 0 chr5 41243878 41243961 -161841571 + AT_rich Low_complexity Low_complexity 1 83 0 934 152 0 0 chr5 41244971 41245109 -161840423 + AluJb SINE Alu 4 141 -171 240 35 0 0 chr5 41245126 41245155 -161840377 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 227 211 92 13 chr5 41245586 41245662 -161839870 + L1M4 LINE L1 5209 5290 -856 185 351 54 60 chr5 41246046 41246214 -161839318 - L2 LINE L2 -250 3022 2856 750 130 35 0 chr5 41247502 41247617 -161837915 + L1MA3 LINE L1 16 134 -7431 * 14605 154 44 16 chr5 41247615 41248637 -161836895 + L1MA3 LINE L1 1105 2097 -5468 1764 147 14 24 chr5 41248637 41248929 -161836603 + AluJb SINE Alu 1 289 -23 14605 154 44 16 chr5 41248929 41249902 -161835630 + L1MA3 LINE L1 2097 3183 -4382 3454 31 2 2 chr5 41249902 41250321 -161835211 + L1PA4 LINE L1 5734 6152 -3 14605 154 44 16 chr5 41250321 41250778 -161834754 + L1MA3 LINE L1 3183 3626 -3939 9831 166 45 56 chr5 41250764 41253699 -161831833 + L1MA3 LINE L1 4709 7613 -111 * 25 83 0 0 chr5 41254226 41254286 -161831246 + AT_rich Low_complexity Low_complexity 1 60 0 210 71 0 0 chr5 41254478 41254506 -161831026 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 315 286 68 61 chr5 41254533 41254553 -161830979 - L2 LINE L2 -209 3063 3045 2362 133 98 16 chr5 41254553 41254983 -161830549 + MLT1C LTR MaLR 1 465 -2 315 286 68 61 chr5 41254983 41255109 -161830423 - L2 LINE L2 -227 3045 2916 834 196 52 5 chr5 41255131 41255326 -161830206 + MER58B DNA MER1_type 16 341 0 649 227 77 31 chr5 41255341 41255535 -161829997 + MIR SINE MIR 60 262 0 209 335 144 46 chr5 41255619 41255813 -161829719 - L2 LINE L2 -400 2914 2702 421 282 0 0 chr5 41256140 41256243 -161829289 + MER94 DNA DNA 1 103 -31 465 300 111 62 chr5 41257940 41258407 -161827125 - L2 LINE L2 -887 2427 1938 1215 223 54 26 chr5 41258524 41258910 -161826622 + L1ME3 LINE L1 5765 6161 -1 7578 205 114 42 chr5 41259099 41260736 -161824796 + MER52A LTR ERV1 1 1755 0 328 312 33 107 chr5 41260791 41261128 -161824404 - L2 LINE L2 -1839 1475 1164 197 214 48 71 chr5 41261132 41261216 -161824316 - L2 LINE L2 -976 2338 2257 21 36 0 0 chr5 41262543 41262571 -161822961 + AT_rich Low_complexity Low_complexity 1 28 0 2138 122 0 3 chr5 41263319 41263622 -161821910 + AluSq SINE Alu 6 307 -6 547 302 44 28 chr5 41263857 41264105 -161821427 + L2 LINE L2 3061 3312 -1 716 140 9 0 chr5 41264324 41264438 -161821094 - AluJb SINE Alu -197 115 1 267 242 11 11 chr5 41264689 41264780 -161820752 + L1ME LINE L1 5766 5856 -265 1290 243 39 41 chr5 41265078 41265304 -161820228 - MLT1E2 LTR MaLR 0 626 400 1540 185 3 25 chr5 41265304 41265590 -161819942 - AluJo SINE Alu -32 280 1 1290 243 39 41 chr5 41265590 41265701 -161819831 - MLT1E2 LTR MaLR -226 400 290 549 105 19 57 chr5 41265714 41265819 -161819713 - L1MA9 LINE L1 -36 6276 6176 525 44 0 0 chr5 41265832 41265900 -161819632 + (TG)n Simple_repeat Simple_repeat 1 68 0 287 242 0 45 chr5 41266007 41266073 -161819459 - MLT1E2 LTR MaLR -563 63 1 234 91 0 0 chr5 41266269 41266302 -161819230 + (ATG)n Simple_repeat Simple_repeat 2 34 0 793 252 60 11 chr5 41267106 41267372 -161818160 + L1MCc LINE L1 25 303 -6120 589 307 50 29 chr5 41267456 41267697 -161817835 - MIR SINE MIR -3 259 14 584 222 167 0 chr5 41268040 41268202 -161817330 - L2 LINE L2 0 3313 3125 604 261 121 10 chr5 41268319 41268526 -161817006 - MLT1J LTR MaLR -77 434 205 2263 100 3 3 chr5 41268538 41268838 -161816694 + AluSp SINE Alu 1 300 -13 285 29 0 0 chr5 41272126 41272160 -161813372 + (TA)n Simple_repeat Simple_repeat 2 35 0 1576 261 37 29 chr5 41272854 41273442 -161812090 - L2 LINE L2 -3 3310 2639 1674 143 24 44 chr5 41273460 41273753 -161811779 - AluJo SINE Alu -25 287 1 256 232 18 0 chr5 41273771 41273827 -161811705 - L2 LINE L2 -750 2564 2508 209 171 0 0 chr5 41273997 41274032 -161811500 + (TTGG)n Simple_repeat Simple_repeat 3 37 0 628 104 31 0 chr5 41274032 41274128 -161811404 + U6 snRNA snRNA 2 100 -7 616 258 103 15 chr5 41274238 41274443 -161811089 + MIR SINE MIR 16 236 -26 196 319 124 44 chr5 41275699 41275812 -161809720 - MER5A DNA MER1_type -11 178 57 596 201 158 22 chr5 41275851 41276035 -161809497 + MER112 DNA MER1_type 34 242 -18 381 210 180 10 chr5 41276107 41276207 -161809325 - L2 LINE L2 0 3313 3197 339 232 72 0 chr5 41277640 41277709 -161807823 + MIR SINE MIR 20 93 -169 261 207 52 0 chr5 41277940 41277998 -161807534 - L2 LINE L2 -4 3309 3249 252 283 0 0 chr5 41278040 41278100 -161807432 - L2 LINE L2 -262 3051 2992 1025 272 42 0 chr5 41278477 41278760 -161806772 + LTR16C LTR ERVL 191 485 -6 503 296 65 15 chr5 41278920 41279119 -161806413 - MIR SINE MIR -26 236 28 272 331 73 68 chr5 41279255 41279503 -161806029 + L2 LINE L2 3022 3270 -2 466 322 106 49 chr5 41279904 41280168 -161805364 + L2 LINE L2 2994 3272 0 221 268 14 42 chr5 41280644 41280715 -161804817 + L2 LINE L2 3184 3252 -20 1126 247 149 18 chr5 41280969 41281588 -161803944 + L2 LINE L2 2630 3313 0 2376 78 31 65 chr5 41281652 41282038 -161803494 - THE1C LTR MaLR -2 373 1 391 276 49 0 chr5 41283029 41283152 -161802380 + MIR SINE MIR 22 150 -112 1029 207 80 4 chr5 41283718 41283969 -161801563 - L1MA9 LINE L1 -38 6274 6005 347 276 238 9 chr5 41284005 41284215 -161801317 - MIR SINE MIR 0 262 5 196 347 136 22 chr5 41286203 41286526 -161799006 + L2 LINE L2 2004 2394 -920 2034 122 10 7 chr5 41286526 41286830 -161798702 - AluSg SINE Alu -5 305 1 196 347 136 22 chr5 41286830 41286955 -161798577 + L2 LINE L2 2394 2503 -811 290 221 35 70 chr5 41287510 41287596 -161797936 - L2 LINE L2 0 3272 3190 2304 110 0 0 chr5 41288075 41288375 -161797157 + AluSq SINE Alu 1 300 -13 685 264 64 24 chr5 41288561 41288811 -161796721 - MIR SINE MIR 0 262 3 274 283 65 0 chr5 41289005 41289097 -161796435 - MIR SINE MIR -49 213 116 284 266 117 0 chr5 41290759 41290853 -161794679 - MIR SINE MIR -111 151 47 525 286 92 0 chr5 41290981 41291177 -161794355 + MER20 DNA MER1_type 2 215 -4 369 277 75 11 chr5 41292129 41292329 -161793203 - L1MC/D LINE L1 -463 5658 5533 963 252 27 0 chr5 41292772 41292994 -161792538 + MIR SINE MIR 33 260 -2 180 296 37 37 chr5 41293080 41293161 -161792371 + MIR3 SINE MIR 104 184 -24 1441 267 178 19 chr5 41293425 41294332 -161791200 - L2 LINE L2 -6 3307 2258 306 221 13 13 chr5 41294457 41294534 -161790998 - L1ME4a LINE L1 -81 6040 5964 34 24 0 0 chr5 41295335 41295376 -161790156 + AT_rich Low_complexity Low_complexity 1 41 0 315 288 0 0 chr5 41295761 41295841 -161789691 - L1M4 LINE L1 -1998 4148 4069 307 279 12 47 chr5 41296729 41296815 -161788717 - MIR SINE MIR -85 123 41 211 301 48 29 chr5 41299564 41299667 -161785865 - L2 LINE L2 -558 2756 2652 21 36 0 0 chr5 41301893 41301921 -161783611 + AT_rich Low_complexity Low_complexity 1 28 0 2517 57 0 3 chr5 41302178 41302478 -161783054 - AluY SINE Alu -12 299 1 21 57 0 0 chr5 41302571 41302606 -161782926 + AT_rich Low_complexity Low_complexity 1 35 0 3611 40 0 7 chr5 41303175 41303621 -161781911 - L1PA5 LINE L1 -4 6150 5708 232 237 140 0 chr5 41303926 41304019 -161781513 + HAL1 LINE L1 1208 1313 -1194 * 6071 127 41 13 chr5 41304014 41305231 -161780301 + L1MA4A LINE L1 5045 6290 -13 246 244 200 30 chr5 41305245 41305380 -161780152 + HAL1 LINE L1 1299 1456 -1051 1158 164 5 0 chr5 41305415 41305604 -161779928 + MER2 DNA MER2_type 1 190 -155 737 262 94 12 chr5 41305703 41305947 -161779585 - MLT1J2 LTR MaLR -132 318 55 2284 89 7 0 chr5 41306062 41306353 -161779179 + AluSq SINE Alu 1 293 -20 1606 228 102 54 chr5 41307231 41307748 -161777784 - MLT1F LTR MaLR 0 542 1 244 203 203 0 chr5 41308890 41308959 -161776573 + MER103 DNA DNA 12 94 -72 1360 104 5 15 chr5 41308975 41309177 -161776355 - AluSx SINE Alu -18 294 95 1607 87 0 0 chr5 41309177 41309385 -161776147 + MER11B LTR ERVK 6 213 -1023 835 87 0 0 chr5 41309411 41309515 -161776017 - AluSx SINE Alu -209 104 1 524 236 7 57 chr5 41309531 41309671 -161775861 - FLAM_A SINE Alu 0 133 1 961 241 28 31 chr5 41309792 41310078 -161775454 - L1MC5 LINE L1 -368 7672 7413 610 322 78 17 chr5 41311487 41311717 -161773815 - MIR SINE MIR -11 251 8 257 322 178 41 chr5 41313744 41314138 -161771394 + L2 LINE L2 2144 2591 -723 22 35 0 0 chr5 41314219 41314248 -161771284 + AT_rich Low_complexity Low_complexity 1 29 0 5184 66 0 0 chr5 41314248 41314898 -161770634 - L1PA6 LINE L1 -11 6143 5494 200 240 60 0 chr5 41315432 41315482 -161770050 + L2 LINE L2 3259 3311 -2 574 240 56 15 chr5 41315591 41315787 -161769745 - L1MC5 LINE L1 -34 7927 7724 212 347 222 18 chr5 41316142 41316309 -161769223 + MIR3 SINE MIR 3 203 -5 511 335 61 4 chr5 41316331 41316561 -161768971 - MIR SINE MIR 0 262 20 281 312 110 32 chr5 41317280 41317434 -161768098 - MIR SINE MIR -44 218 53 1017 278 108 10 chr5 41317593 41317999 -161767533 - MLT1J2 LTR MaLR 0 450 5 22 0 0 0 chr5 41318879 41318901 -161766631 + AT_rich Low_complexity Low_complexity 1 22 0 419 287 170 12 chr5 41319022 41319269 -161766263 - L1MC/D LINE L1 -2029 5779 5494 544 126 46 0 chr5 41319493 41319580 -161765952 - Tigger7 DNA MER2_type -1 2486 2396 * 2895 171 32 10 chr5 41319574 41320072 -161765460 - Tigger7 DNA MER2_type -208 525 17 25 31 0 0 chr5 41320232 41320264 -161765268 + AT_rich Low_complexity Low_complexity 1 32 0 296 287 155 16 chr5 41320798 41320927 -161764605 + MIR3 SINE MIR 19 165 -43 2017 37 0 0 chr5 41321364 41321606 -161763926 - L1PA4 LINE L1 -3 6152 5911 1996 227 73 73 chr5 41321924 41322747 -161762785 + L1ME3A LINE L1 5343 6165 -5 22 56 0 0 chr5 41323786 41323822 -161761710 + AT_rich Low_complexity Low_complexity 1 36 0 378 271 85 25 chr5 41324415 41324533 -161760999 - L2 LINE L2 -1 3312 3188 2207 96 13 7 chr5 41324868 41325170 -161760362 - AluSg SINE Alu -6 304 1 889 199 70 11 chr5 41327006 41327192 -161758340 - MER20 DNA MER1_type -17 202 6 735 234 208 21 chr5 41327201 41327676 -161757856 + L1MC5 LINE L1 7332 7895 -66 36843 59 8 6 chr5 41328001 41333718 -161751814 + L1P2 LINE L1 2 5722 -432 251 179 24 60 chr5 41335412 41335496 -161750036 - Tigger6b DNA MER2_type -763 834 754 2012 144 0 3 chr5 41336118 41336424 -161749108 - AluJb SINE Alu -7 305 1 254 232 155 0 chr5 41337022 41337125 -161748407 + MIR SINE MIR 54 171 -37 1733 198 57 37 chr5 41337721 41338125 -161747407 - MLT1F LTR MaLR -130 412 1 1130 190 17 13 chr5 41338246 41338478 -161747054 + MLT1F1 LTR MaLR 333 565 -2 281 254 141 7 chr5 41338975 41339117 -161746415 - L2 LINE L2 -2 3311 3151 420 249 24 115 chr5 41339964 41339997 -161745535 - L2 LINE L2 -494 2820 2786 606 191 9 17 chr5 41339997 41340112 -161745420 + MER81 DNA DNA 1 114 0 420 249 24 115 chr5 41340112 41340287 -161745245 - L2 LINE L2 -528 2786 2631 2012 120 4 0 chr5 41341243 41341518 -161744014 + AluSx SINE Alu 34 309 -3 302 202 258 16 chr5 41342843 41342967 -161742565 - MER20 DNA MER1_type 0 219 66 22 0 0 0 chr5 41344222 41344244 -161741288 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 41344690 41344726 -161740806 + AT_rich Low_complexity Low_complexity 1 36 0 1004 50 0 36 chr5 41344871 41345010 -161740522 - AluY SINE Alu 0 311 178 617 256 0 0 chr5 41345473 41345606 -161739926 - FLAM_A SINE Alu 0 133 1 1697 183 3 20 chr5 41345664 41345965 -161739567 - AluJb SINE Alu -16 296 1 787 271 133 75 chr5 41346634 41347183 -161738349 + L2 LINE L2 2165 2745 -569 305 262 233 0 chr5 41347527 41347630 -161737902 + L2 LINE L2 3182 3308 -5 2071 120 3 31 chr5 41449043 41449360 -161636172 + AluSq SINE Alu 1 308 -5 449 264 7 0 chr5 41449648 41449796 -161635736 + (TG)n Simple_repeat Simple_repeat 2 150 0 300 324 28 35 chr5 41451154 41451299 -161634233 + MIR SINE MIR 70 213 -49 236 261 14 0 chr5 41451492 41451561 -161633971 + HAL1 LINE L1 1 70 -2437 2063 114 49 3 chr5 41451588 41451938 -161633594 + L1MA2 LINE L1 5939 6304 0 23 0 0 0 chr5 41451938 41451961 -161633571 + AT_rich Low_complexity Low_complexity 1 23 0 198 270 40 14 chr5 41452076 41452150 -161633382 + MER5B DNA MER1_type 103 178 0 204 297 90 27 chr5 41452189 41452300 -161633232 - MER5A DNA MER1_type 0 189 72 * 234 313 48 12 chr5 41452218 41452301 -161633231 + MER5A DNA MER1_type 44 129 -60 209 296 61 98 chr5 41452380 41452512 -161633020 - MER5A DNA MER1_type -26 163 37 375 278 186 27 chr5 41453779 41454117 -161631415 + HAL1 LINE L1 1 392 -2115 282 29 0 0 chr5 41454183 41454218 -161631314 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2069 94 7 4 chr5 41454218 41454494 -161631038 - AluSc SINE Alu -32 277 1 502 229 223 11 chr5 41455659 41455834 -161629698 + MIR SINE MIR 50 261 -1 434 286 40 16 chr5 41455945 41456071 -161629461 + L2 LINE L2 3140 3268 -4 621 241 64 75 chr5 41456881 41457163 -161628369 - LTR16C LTR ERVL -25 466 188 250 284 12 12 chr5 41457526 41457607 -161627925 - L3 LINE CR1 -308 1269 1189 1172 153 110 4 chr5 41457739 41457967 -161627565 + MLT1D LTR MaLR 248 499 -6 1215 232 30 57 chr5 41457967 41458492 -161627040 + L1M4 LINE L1 2276 2786 -3360 915 255 24 61 chr5 41458523 41459014 -161626518 + L1M4 LINE L1 2968 3440 -2706 763 190 3 129 chr5 41459009 41459320 -161626212 + L1ME1 LINE L1 5840 6111 -55 * 1646 154 44 7 chr5 41459320 41459798 -161625734 + L1MA5 LINE L1 5044 5534 -743 312 122 0 0 chr5 41459941 41459990 -161625542 - MADE1 DNA Mariner -30 50 2 4349 114 26 15 chr5 41459990 41460201 -161625331 + L1MA5 LINE L1 5568 5775 -525 2292 111 0 13 chr5 41460201 41460517 -161625015 + AluSx SINE Alu 1 312 0 4349 114 26 15 chr5 41460517 41461030 -161624502 + L1MA5 LINE L1 5775 6300 0 2225 84 0 4 chr5 41461202 41461476 -161624056 + AluSq SINE Alu 27 299 -14 231 235 24 47 chr5 41463273 41463358 -161622174 - LTR67 LTR ERVL 0 557 475 484 277 51 63 chr5 41463705 41464055 -161621477 + LTR16C LTR ERVL 146 491 0 181 299 119 0 chr5 41464170 41464237 -161621295 + L2 LINE L2 3198 3272 0 371 304 74 15 chr5 41464349 41464484 -161621048 + MIR SINE MIR 23 165 -97 210 200 0 55 chr5 41464531 41464586 -161620946 - MIR SINE MIR -98 164 113 822 181 6 30 chr5 41464809 41464975 -161620557 + MLT1A2 LTR MaLR 1 162 -212 2157 135 3 0 chr5 41465504 41465816 -161619716 + AluSq SINE Alu 1 313 0 365 274 88 36 chr5 41465932 41466151 -161619381 + L1MEc LINE L1 2185 2377 -3838 1037 201 59 70 chr5 41466245 41466633 -161618899 - L1MA8 LINE L1 -1 6290 5907 481 207 0 0 chr5 41466635 41466722 -161618810 + MER44D DNA MER2_type 1 357 -252 2149 138 10 50 chr5 41466724 41467226 -161618306 - L1MA8 LINE L1 -509 5791 5310 219 36 0 0 chr5 41467226 41467254 -161618278 + (TTG)n Simple_repeat Simple_repeat 1 28 0 936 78 0 0 chr5 41467357 41467473 -161618059 + AluSg/x SINE Alu 180 295 -14 6123 104 34 0 chr5 41467475 41468570 -161616962 - L1PA15 LINE L1 -16 6149 5040 1975 162 30 5 chr5 41468570 41468977 -161616555 - L1MA8 LINE L1 -1315 4831 4415 3153 228 17 11 chr5 41469001 41469935 -161615597 + L1MEc LINE L1 2509 3448 -2767 2067 115 12 18 chr5 41469942 41470296 -161615236 + L1PB3 LINE L1 5819 6170 0 982 89 62 42 chr5 41470296 41470546 -161614986 - Tigger3(Golem) DNA MER2_type -460 2568 2310 947 214 59 0 chr5 41470544 41470731 -161614801 - Tigger3(Golem) DNA MER2_type -2831 198 1 * 232 319 31 74 chr5 41470948 41471111 -161614421 - LTR16C LTR ERVL -263 228 73 2335 90 0 0 chr5 41471445 41471735 -161613797 + AluSc SINE Alu 1 290 -19 281 295 63 30 chr5 41471955 41472223 -161613309 + HAL1b LINE L1 75 351 -997 295 187 151 29 chr5 41472258 41472397 -161613135 + HAL1b LINE L1 333 488 -860 239 269 113 7 chr5 41472421 41472562 -161612970 + HAL1b LINE L1 531 686 -662 1820 217 39 31 chr5 41472647 41473316 -161612216 + L1ME1 LINE L1 2642 3315 -2900 910 186 0 68 chr5 41473346 41473594 -161611938 + AluJb SINE Alu 1 231 -81 3908 240 51 19 chr5 41473750 41475145 -161610387 + L1ME1 LINE L1 3469 4908 -1307 810 195 52 27 chr5 41475163 41475206 -161610326 + L1ME1 LINE L1 5234 5274 -957 2133 113 26 0 chr5 41475206 41475508 -161610024 + AluSx SINE Alu 3 312 0 810 195 52 27 chr5 41475508 41475784 -161609748 + L1ME1 LINE L1 5274 5554 -677 1329 106 6 6 chr5 41475786 41475966 -161609566 + AluSg/x SINE Alu 130 309 -3 1140 225 75 6 chr5 41475981 41476314 -161609218 + L1ME1 LINE L1 5578 5933 -302 996 85 0 0 chr5 41476537 41476667 -161608865 - AluSp/q SINE Alu -10 303 174 882 292 102 9 chr5 41476767 41477199 -161608333 - HAL1 LINE L1 -1809 698 227 244 247 0 41 chr5 41477274 41477347 -161608185 - HAL1 LINE L1 -2402 105 36 2379 166 23 13 chr5 41477353 41477824 -161607708 - L1MB8 LINE L1 -10 6168 5693 3064 127 7 38 chr5 41477824 41478372 -161607160 - L1PA15 LINE L1 -4 6161 5628 2501 151 33 27 chr5 41478555 41479283 -161606249 - L1PA15 LINE L1 -616 5549 4815 * 5197 174 6 29 chr5 41479281 41480411 -161605121 + L1P LINE L1 3748 4851 -1295 2250 112 23 3 chr5 41480445 41480750 -161604782 - AluSq SINE Alu -2 311 1 1728 266 31 48 chr5 41480865 41481629 -161603903 - L1MB8 LINE L1 -577 5601 4848 1628 136 3 28 chr5 41481638 41481925 -161603607 + L1MB1 LINE L1 5692 5971 -197 530 165 0 0 chr5 41482034 41482125 -161603407 + AluSg/x SINE Alu 212 302 -7 2040 122 7 3 chr5 41482285 41482580 -161602952 - AluSx SINE Alu -16 296 1 190 373 0 0 chr5 41482583 41482650 -161602882 - L2 LINE L2 -482 2832 2766 475 218 296 0 chr5 41482658 41482800 -161602732 - MER5A DNA MER1_type -2 187 4 2221 89 3 0 chr5 41483538 41483871 -161601661 - AluSp SINE Alu 0 334 1 257 340 165 0 chr5 41484033 41484130 -161601402 - L2 LINE L2 -4 3268 3156 286 231 77 18 chr5 41484221 41484390 -161601142 + L1 LINE L1 5197 5375 -771 2289 104 0 0 chr5 41484509 41484806 -161600726 - AluSg SINE Alu -13 297 1 2240 96 3 7 chr5 41485357 41485659 -161599873 - AluSx SINE Alu -9 303 3 1618 174 76 0 chr5 41485978 41486253 -161599279 + AluJb SINE Alu 5 300 -12 2282 89 7 3 chr5 41486256 41486548 -161598984 + AluSc SINE Alu 2 294 -15 227 286 0 59 chr5 41486974 41487093 -161598439 + L1MC5 LINE L1 7806 7917 -44 421 256 36 67 chr5 41487189 41487384 -161598148 - L1ME LINE L1 -440 5681 5493 2332 108 0 13 chr5 41487631 41487946 -161597586 - AluSx SINE Alu -1 311 1 683 277 71 31 chr5 41488207 41488683 -161596849 - L1MB8 LINE L1 -1295 4851 4357 2102 117 3 7 chr5 41488855 41489155 -161596377 + AluSx SINE Alu 1 299 -13 244 345 0 24 chr5 41490688 41490772 -161594760 - L2 LINE L2 -42 3230 3149 1093 283 120 18 chr5 41494471 41494912 -161590620 - LTR33 LTR ERVL 0 521 36 404 285 24 24 chr5 41495024 41495147 -161590385 + MER5C DNA MER1_type 6 128 -196 26 0 0 0 chr5 41495314 41495340 -161590192 + AT_rich Low_complexity Low_complexity 1 26 0 307 277 24 0 chr5 41495547 41495630 -161589902 + L1ME LINE L1 91 175 -5895 1820 134 0 0 chr5 41495645 41495891 -161589641 + AluSg SINE Alu 1 246 -64 844 126 0 31 chr5 41496073 41496200 -161589332 - AluJo SINE Alu -78 234 112 857 229 200 4 chr5 41496204 41496484 -161589048 + L1MC4a LINE L1 6633 6905 -903 1992 216 96 35 chr5 41496545 41497120 -161588412 + L1MC4 LINE L1 7325 7934 -108 289 172 109 141 chr5 41497175 41497256 -161588276 + L1MC4 LINE L1 7919 7996 -46 2421 101 0 0 chr5 41497256 41497564 -161587968 - AluSg SINE Alu 0 310 3 289 172 109 141 chr5 41497564 41497610 -161587922 + L1MC4 LINE L1 7996 8042 0 23 33 0 0 chr5 41497618 41497648 -161587884 + AT_rich Low_complexity Low_complexity 1 30 0 279 231 19 46 chr5 41497932 41498040 -161587492 + MER114 LTR ERV 544 648 0 28 29 0 0 chr5 41498042 41498077 -161587455 + AT_rich Low_complexity Low_complexity 1 35 0 872 290 73 66 chr5 41498130 41498275 -161587257 + MER114 LTR ERV 1 144 -504 2483 74 3 0 chr5 41498275 41498573 -161586959 - AluSp SINE Alu -14 299 1 872 290 73 66 chr5 41498573 41499072 -161586460 + MER114 LTR ERV 144 648 0 5712 96 4 4 chr5 41499175 41499953 -161585579 - L1PA8 LINE L1 0 6172 5395 234 203 17 0 chr5 41500920 41500979 -161584553 + T-rich Low_complexity Low_complexity 2 61 0 286 250 38 0 chr5 41501544 41501624 -161583908 + MIR SINE MIR 124 206 -56 460 309 65 52 chr5 41501830 41502121 -161583411 - L3 LINE CR1 -561 1016 722 2022 105 0 83 chr5 41502153 41502477 -161583055 + AluSq SINE Alu 1 297 -16 1779 83 133 8 chr5 41502479 41502743 -161582789 + AluSg1 SINE Alu 1 297 -12 251 303 144 46 chr5 41502771 41502966 -161582566 + MIR SINE MIR 48 261 -1 30 59 0 0 chr5 41503002 41503053 -161582479 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 41503078 41503107 -161582425 + AT_rich Low_complexity Low_complexity 1 29 0 195 129 0 0 chr5 41503683 41503714 -161581818 + (TC)n Simple_repeat Simple_repeat 2 32 0 563 278 86 0 chr5 41505316 41505467 -161580065 - MIR3 SINE MIR -13 195 32 570 274 46 23 chr5 41505678 41505897 -161579635 + L1ME4a LINE L1 5605 5828 -293 793 236 46 0 chr5 41505934 41506129 -161579403 - MIR SINE MIR 0 262 59 275 299 47 28 chr5 41506898 41507005 -161578527 - L2 LINE L2 -1 3271 3163 976 255 84 47 chr5 41507031 41507474 -161578058 + MLT1G3 LTR MaLR 33 587 -8 307 326 77 45 chr5 41507576 41507978 -161577554 + L2 LINE L2 2347 2761 -553 802 306 61 4 chr5 41508722 41508983 -161576549 + MLT1J LTR MaLR 56 331 -180 2531 91 45 0 chr5 41509847 41510199 -161575333 - LTR8 LTR ERV1 0 691 324 439 253 97 13 chr5 41510228 41510382 -161575150 + L1MA10 LINE L1 6165 6331 -3 247 241 26 69 chr5 41510401 41510517 -161575015 + L1P LINE L1 4895 5005 -1141 204 156 0 22 chr5 41510527 41510539 -161574993 + A-rich Low_complexity Low_complexity 2 13 -32 796 204 0 0 chr5 41510539 41510671 -161574861 + FLAM_A SINE Alu 1 132 -1 204 156 0 22 chr5 41510671 41510703 -161574829 + A-rich Low_complexity Low_complexity 13 45 0 960 135 0 0 chr5 41510921 41511054 -161574478 + FLAM_C SINE Alu 1 133 0 330 26 0 0 chr5 41511055 41511094 -161574438 + (TA)n Simple_repeat Simple_repeat 2 40 0 682 235 238 3 chr5 41511838 41512178 -161573354 + L2 LINE L2 2036 2455 -859 940 274 162 27 chr5 41512364 41512925 -161572607 + L2 LINE L2 2150 2786 -528 595 212 22 7 chr5 41512941 41513078 -161572454 + L2 LINE L2 3162 3300 -13 2225 89 7 3 chr5 41513376 41513668 -161571864 + AluSp SINE Alu 1 293 -20 817 146 15 8 chr5 41513686 41513816 -161571716 + AluJo SINE Alu 7 137 -175 246 62 0 0 chr5 41515047 41515079 -161570453 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2549 46 13 0 chr5 41515252 41515559 -161569973 - AluY SINE Alu 0 311 1 181 319 21 49 chr5 41515734 41515878 -161569654 + L2 LINE L2 2920 3059 -213 547 260 48 78 chr5 41516130 41516399 -161569133 + MIR SINE MIR 2 262 0 1444 164 33 52 chr5 41516569 41516671 -161568861 - MER33 DNA MER1_type -2261 324 222 1564 183 0 22 chr5 41516671 41516945 -161568587 - AluJb SINE Alu -44 268 1 1444 164 33 52 chr5 41516945 41517172 -161568360 - MER33 DNA MER1_type -2363 222 1 238 304 88 29 chr5 41517284 41517386 -161568146 + MIR SINE MIR 30 137 -71 2018 87 11 0 chr5 41517526 41517791 -161567741 - AluSg SINE Alu -11 299 32 974 112 0 28 chr5 41517831 41517994 -161567538 - AluSp SINE Alu 0 303 145 191 327 53 44 chr5 41519925 41520038 -161565494 - L2 LINE L2 -18 3295 3182 239 354 0 49 chr5 41520290 41520434 -161565098 + MIR SINE MIR 80 216 -46 196 293 73 0 chr5 41521246 41521328 -161564204 - L2 LINE L2 -32 3240 3153 180 239 87 0 chr5 41521455 41521501 -161564031 + L2 LINE L2 3223 3272 0 209 250 21 0 chr5 41523172 41523220 -161562312 - L2 LINE L2 -86 3227 3179 21 0 0 0 chr5 41523727 41523748 -161561784 + AT_rich Low_complexity Low_complexity 1 21 0 741 240 62 61 chr5 41527760 41528032 -161557500 - MIR SINE MIR 0 262 8 180 0 0 0 chr5 41529102 41529122 -161556410 + (A)n Simple_repeat Simple_repeat 1 20 0 279 79 0 0 chr5 41529905 41529943 -161555589 + (CA)n Simple_repeat Simple_repeat 1 38 0 216 67 0 0 chr5 41530027 41530057 -161555475 + (CA)n Simple_repeat Simple_repeat 1 30 0 1396 164 4 35 chr5 41530190 41530477 -161555055 + AluJb SINE Alu 51 329 0 629 213 148 20 chr5 41530480 41530682 -161554850 - MIR SINE MIR -21 241 14 235 243 14 43 chr5 41531858 41531928 -161553604 + MIR SINE MIR 2 69 -193 412 241 179 25 chr5 41532992 41533154 -161552378 + MIR3 SINE MIR 16 202 -6 297 75 0 0 chr5 41533208 41533248 -161552284 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 2191 92 0 0 chr5 41533763 41534045 -161551487 + AluSg1 SINE Alu 7 288 -21 198 0 0 0 chr5 41535258 41535280 -161550252 + (T)n Simple_repeat Simple_repeat 1 22 0 960 245 140 30 chr5 41535452 41535823 -161549709 - L1MC4a LINE L1 -1851 5957 5546 1403 177 117 0 chr5 41537200 41537466 -161548066 + AluJo SINE Alu 1 297 -15 241 270 9 135 chr5 41537790 41537901 -161547631 - MIR3 SINE MIR -15 193 97 389 266 63 38 chr5 41537907 41538065 -161547467 + MIR SINE MIR 34 195 -67 1020 260 116 50 chr5 41538470 41538754 -161546778 - L2 LINE L2 -1 3312 3048 2229 105 0 0 chr5 41538754 41539048 -161546484 - AluSx SINE Alu -18 294 1 1020 260 116 50 chr5 41539048 41539442 -161546090 - L2 LINE L2 -265 3048 2587 272 295 71 54 chr5 41539456 41539568 -161545964 - MIR SINE MIR -59 149 36 614 64 65 2 chr5 41539681 41539773 -161545759 + MLT1E LTR MaLR 80 169 -424 2136 107 3 31 chr5 41540670 41540987 -161544545 + AluSg SINE Alu 1 308 -2 197 277 119 10 chr5 41541443 41541544 -161543988 + MIR SINE MIR 3 114 -148 382 225 11 11 chr5 41541560 41541649 -161543883 + MIR SINE MIR 69 157 -105 402 257 34 73 chr5 41542151 41542272 -161543260 + MIR SINE MIR 16 138 -124 2165 128 3 0 chr5 41542272 41542576 -161542956 + AluSx SINE Alu 1 305 -7 402 257 34 73 chr5 41542576 41542650 -161542882 + MIR SINE MIR 138 213 -49 313 330 52 19 chr5 41544690 41544902 -161540630 + L1ME LINE L1 5609 5827 -294 722 281 74 4 chr5 41545030 41545261 -161540271 + MIR SINE MIR 13 259 -3 201 74 0 0 chr5 41546654 41546681 -161538851 + (T)n Simple_repeat Simple_repeat 1 27 0 314 171 29 14 chr5 41549265 41549335 -161536197 - Charlie8 DNA MER1_type -2003 414 344 263 167 45 30 chr5 41549436 41549502 -161536030 - Charlie8 DNA MER1_type -2256 161 95 295 122 232 37 chr5 41550722 41550804 -161534728 - L2 LINE L2 0 3313 3216 989 207 194 45 chr5 41551019 41551232 -161534300 + MER113 DNA MER1_type? 61 241 -280 2211 116 0 0 chr5 41551232 41551569 -161533963 + AluSx SINE Alu 1 337 0 989 207 194 45 chr5 41551569 41551754 -161533778 + MER113 DNA MER1_type? 241 521 0 224 340 124 0 chr5 41551772 41551869 -161533663 - L3 LINE CR1 -79 1498 1390 315 256 273 0 chr5 41552462 41552583 -161532949 + MIR SINE MIR 106 259 -3 462 18 0 0 chr5 41553296 41553351 -161532181 + (TG)n Simple_repeat Simple_repeat 2 56 0 386 266 70 31 chr5 41553425 41553553 -161531979 - L2 LINE L2 -4 3268 3136 832 121 24 12 chr5 41553719 41553884 -161531648 + CT-rich Low_complexity Low_complexity 2 168 0 181 260 62 52 chr5 41554085 41554181 -161531351 - L3 LINE CR1 -27 1550 1454 474 256 267 39 chr5 41554208 41554571 -161530961 - L3 LINE CR1 -218 1359 914 442 292 8 8 chr5 41555133 41555253 -161530279 - MER5B DNA MER1_type -56 122 3 267 311 80 71 chr5 41555330 41555555 -161529977 + L2 LINE L2 3015 3241 -31 2386 83 0 0 chr5 41555934 41556234 -161529298 - AluSg SINE Alu -10 300 1 785 251 68 0 chr5 41556401 41556592 -161528940 + MIR SINE MIR 38 241 -21 350 324 81 16 chr5 41556735 41556920 -161528612 - L1ME LINE L1 -362 5759 5563 336 48 0 0 chr5 41558244 41558286 -161527246 + (CA)n Simple_repeat Simple_repeat 2 43 0 2352 153 3 5 chr5 41559802 41560182 -161525350 - L1MB8 LINE L1 0 6178 5800 234 125 0 0 chr5 41560215 41560247 -161525285 + L1ME LINE L1 5774 5805 -361 2341 162 56 54 chr5 41560274 41560811 -161524721 - L1MB8 LINE L1 -382 5802 5265 2024 93 0 63 chr5 41560973 41561319 -161524213 + AluSg SINE Alu 1 327 0 573 150 20 0 chr5 41561761 41561861 -161523671 + L1MB2 LINE L1 6067 6168 -3 2121 108 16 7 chr5 41562580 41562885 -161522647 - AluSg1 SINE Alu -1 308 1 2225 106 3 17 chr5 41566326 41566627 -161518905 + AluSp SINE Alu 6 302 -11 366 186 78 142 chr5 41567549 41567936 -161517596 - L1MC5 LINE L1 -236 7725 7364 228 67 0 0 chr5 41568412 41568442 -161517090 + (A)n Simple_repeat Simple_repeat 1 30 0 267 277 69 19 chr5 41568847 41569006 -161516526 + L2 LINE L2 2953 3119 -153 267 31 0 0 chr5 41569585 41569617 -161515915 + (CA)n Simple_repeat Simple_repeat 1 32 0 180 247 309 12 chr5 41570978 41571032 -161514500 + L2 LINE L2 3150 3254 -18 182 148 0 0 chr5 41571032 41571059 -161514473 + MIR SINE MIR 224 250 -12 2265 106 7 0 chr5 41571111 41571412 -161514120 - AluSg SINE Alu -7 303 1 456 270 23 16 chr5 41573474 41573627 -161511905 - MIR SINE MIR -63 145 19 232 176 39 0 chr5 41574030 41574081 -161511451 - L2 LINE L2 -2 3270 3218 1478 289 113 17 chr5 41574687 41575227 -161510305 + L3 LINE CR1 533 1124 -453 231 354 87 34 chr5 41575253 41575459 -161510073 - L2 LINE L2 -8 3264 3048 220 311 66 54 chr5 41575649 41575974 -161509558 + L3 LINE CR1 1106 1470 -107 586 235 138 28 chr5 41576409 41576626 -161508906 + MIR SINE MIR 1 241 -21 283 253 95 11 chr5 41576798 41576893 -161508639 - MIR SINE MIR -149 113 11 244 212 0 71 chr5 41578170 41578269 -161507263 + CT-rich Low_complexity Low_complexity 4 95 0 2319 94 0 0 chr5 41578408 41578705 -161506827 + AluSx SINE Alu 9 305 -7 2104 84 6 81 chr5 41580476 41580811 -161504721 - AluSx SINE Alu -2 310 1 2135 120 3 3 chr5 41581395 41581703 -161503829 - AluSq SINE Alu -5 308 1 800 221 32 42 chr5 41581753 41581970 -161503562 + MER112 DNA MER1_type 1 215 -45 548 217 36 14 chr5 41582555 41582693 -161502839 - L2 LINE L2 -6 3307 3167 715 266 137 13 chr5 41582852 41583085 -161502447 - MIR SINE MIR 0 262 1 558 259 36 7 chr5 41584779 41584918 -161500614 + MIR SINE MIR 49 191 -71 230 180 0 20 chr5 41587919 41587969 -161497563 + (CA)n Simple_repeat Simple_repeat 2 50 0 190 103 0 0 chr5 41588949 41588978 -161496554 - MIR3 SINE MIR -32 176 148 560 235 82 47 chr5 41589496 41589666 -161495866 - LTR33 LTR ERVL -345 176 1 302 308 48 0 chr5 41590563 41590667 -161494865 - MIR3 SINE MIR -33 175 67 363 286 134 49 chr5 41591842 41592066 -161493466 - MIR SINE MIR -7 255 13 189 301 48 24 chr5 41593623 41593706 -161491826 - MIR SINE MIR -73 189 105 501 235 20 0 chr5 41593773 41593875 -161491657 - HAL1 LINE L1 -2399 108 5 249 33 0 0 chr5 41593910 41593940 -161491592 + (TG)n Simple_repeat Simple_repeat 2 31 0 261 97 97 0 chr5 41594077 41594139 -161491393 - L1ME4a LINE L1 -31 6090 6023 777 285 78 22 chr5 41594737 41595095 -161490437 - L2 LINE L2 -5 3308 2931 607 213 51 15 chr5 41596141 41596338 -161489194 - MER113 DNA MER1_type? -286 235 32 2213 110 7 0 chr5 41597906 41598205 -161487327 + AluSx SINE Alu 1 301 -11 311 227 192 61 chr5 41599288 41599517 -161486015 - L1MC4 LINE L1 -176 7866 7608 251 179 30 60 chr5 41599798 41599865 -161485667 - MLT1J LTR MaLR -28 483 419 469 231 128 0 chr5 41600018 41600135 -161485397 - MLT1J LTR MaLR -312 199 68 238 281 94 23 chr5 41600525 41600653 -161484879 + MIR SINE MIR 121 257 -5 1927 163 3 0 chr5 41600697 41600992 -161484540 + AluSx SINE Alu 1 296 -16 275 347 68 0 chr5 41602088 41602235 -161483297 + MIR SINE MIR 82 238 -24 1238 171 29 154 chr5 41602289 41602539 -161482993 - Charlie1b DNA MER1_type -2271 490 332 2358 98 3 0 chr5 41602539 41602846 -161482686 - AluSq SINE Alu -5 308 1 1238 171 29 154 chr5 41602846 41603078 -161482454 - Charlie1b DNA MER1_type -2429 332 73 493 229 16 0 chr5 41604097 41604219 -161481313 + MIR3 SINE MIR 82 205 -3 1763 95 117 26 chr5 41606827 41607100 -161478432 - AluJo SINE Alu -14 298 1 423 147 53 0 chr5 41608258 41608333 -161477199 - MER53 DNA DNA 0 189 111 238 108 27 0 chr5 41608375 41608412 -161477120 - MER53 DNA DNA -151 38 1 202 238 0 0 chr5 41608759 41608801 -161476731 + T-rich Low_complexity Low_complexity 5 46 0 275 264 45 27 chr5 41609890 41610000 -161475532 + MIR SINE MIR 118 229 -33 827 133 28 133 chr5 41610770 41610915 -161474617 + MER5A DNA MER1_type 1 119 -70 854 201 6 6 chr5 41610915 41611079 -161474453 - FAM SINE Alu -11 164 1 827 133 28 133 chr5 41611079 41611144 -161474388 + MER5A DNA MER1_type 119 189 0 419 245 81 2 chr5 41611155 41611318 -161474214 + MIR SINE MIR 19 192 -70 996 184 40 93 chr5 41611551 41611829 -161473703 + MLT1B LTR MaLR 1 263 -127 966 176 0 0 chr5 41612139 41612292 -161473240 + FRAM SINE Alu 1 153 -23 237 65 0 0 chr5 41612325 41612356 -161473176 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 244 292 67 0 chr5 41612373 41612462 -161473070 - MIR SINE MIR -80 182 88 2547 56 0 3 chr5 41612609 41612914 -161472618 - AluY SINE Alu -7 304 1 461 219 256 6 chr5 41612914 41613078 -161472454 - MER112 DNA MER1_type -1 259 55 185 194 0 0 chr5 41613861 41613897 -161471635 - L2 LINE L2 -970 2344 2309 523 290 91 26 chr5 41614004 41614235 -161471297 - MIR SINE MIR 0 262 17 705 293 107 4 chr5 41614270 41614495 -161471037 - MIR SINE MIR 0 262 15 188 286 63 48 chr5 41614819 41614945 -161470587 + L2 LINE L2 2717 2844 -470 229 273 222 15 chr5 41615111 41615309 -161470223 + L2 LINE L2 2985 3223 -49 185 139 23 0 chr5 41615329 41615372 -161470160 + (TA)n Simple_repeat Simple_repeat 1 44 0 278 294 58 0 chr5 41615450 41615564 -161469968 - MER20B DNA MER1_type -17 202 81 21 71 0 0 chr5 41617378 41617420 -161468112 + AT_rich Low_complexity Low_complexity 1 42 0 800 204 0 19 chr5 41617420 41617582 -161467950 - MER3 DNA MER1_type -86 123 12 1685 168 10 16 chr5 41617738 41618041 -161467491 + AluJb SINE Alu 3 303 -9 694 272 43 39 chr5 41618505 41618737 -161466795 + MIR SINE MIR 24 256 -6 189 260 39 39 chr5 41618772 41618849 -161466683 + MIR SINE MIR 27 103 -159 1526 230 91 34 chr5 41619849 41620323 -161465209 - MLT1D LTR MaLR 0 505 5 234 0 0 0 chr5 41621323 41621349 -161464183 + (TAA)n Simple_repeat Simple_repeat 2 27 0 264 293 0 0 chr5 41621547 41621629 -161463903 + MIR SINE MIR 168 249 -13 1390 187 138 59 chr5 41623600 41624007 -161461525 + MLT1D LTR MaLR 4 442 -63 699 230 29 6 chr5 41624086 41624260 -161461272 - MER5B DNA MER1_type 0 178 1 419 311 55 0 chr5 41624499 41624663 -161460869 - LTR67 LTR ERVL -3 554 382 962 287 25 102 chr5 41625454 41625976 -161459556 - ERVL LTR ERVL -331 5433 4952 656 181 0 39 chr5 41625976 41626103 -161459429 + L1MC4 LINE L1 7390 7511 -531 624 290 77 39 chr5 41626103 41626441 -161459091 - ERVL LTR ERVL -1639 4125 3775 1364 269 53 10 chr5 41626727 41627140 -161458392 - ERVL LTR ERVL -2304 3350 2920 1196 88 132 28 chr5 41627142 41627324 -161458208 - AluSc SINE Alu -10 299 99 1472 324 89 9 chr5 41627328 41628005 -161457527 - ERVL LTR ERVL -2808 2956 2226 727 316 78 4 chr5 41628144 41628400 -161457132 - ERVL LTR ERVL -3715 2049 1775 672 324 68 18 chr5 41628548 41629238 -161456294 - ERVL LTR ERVL -4204 1560 815 355 372 45 24 chr5 41629278 41629568 -161455964 - ERVL LTR ERVL -5061 703 408 302 306 81 25 chr5 41629937 41630097 -161455435 - LTR67 LTR ERVL -6 551 383 2296 118 0 3 chr5 41631465 41631778 -161453754 - AluSx SINE Alu 0 312 1 189 214 0 0 chr5 41632642 41632684 -161452848 + (CA)n Simple_repeat Simple_repeat 1 42 0 2595 59 0 3 chr5 41632830 41633135 -161452397 - AluY SINE Alu -7 304 1 242 239 15 15 chr5 41633136 41633203 -161452329 + MIR SINE MIR 116 182 -80 417 281 26 0 chr5 41633759 41633873 -161451659 - MER5A DNA MER1_type 0 189 73 356 302 62 8 chr5 41633874 41634003 -161451529 - MER91C DNA MER1_type -1 139 4 2234 127 0 3 chr5 41634088 41634395 -161451137 + AluSx SINE Alu 1 306 -6 672 304 40 37 chr5 41635349 41635671 -161449861 + LTR16C LTR ERVL 156 478 -13 246 296 107 15 chr5 41635905 41636101 -161449431 - MIR SINE MIR -13 249 36 187 327 0 0 chr5 41636422 41636477 -161449055 + L2 LINE L2 3251 3305 -8 308 333 9 0 chr5 41637144 41637249 -161448283 + MER5A DNA MER1_type 1 106 -83 862 178 22 6 chr5 41639814 41639994 -161445538 + MIR SINE MIR 18 200 -62 1740 142 14 18 chr5 41640768 41641050 -161444482 + AluJo SINE Alu 32 312 0 195 280 168 16 chr5 41642117 41642242 -161443290 + L2 LINE L2 2550 2693 -621 397 137 0 27 chr5 41642587 41642660 -161442872 - LTR16C LTR ERVL 0 491 421 280 261 0 0 chr5 41642647 41642712 -161442820 + LTR16A1 LTR ERVL 372 436 -21 * 273 306 66 41 chr5 41643522 41643643 -161441889 - MIR SINE MIR -84 124 1 198 71 0 0 chr5 41643810 41643838 -161441694 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 962 234 133 71 chr5 41643838 41644290 -161441242 - L2 LINE L2 -13 3300 2821 2433 53 0 17 chr5 41644879 41645178 -161440354 + AluY SINE Alu 1 294 -17 285 283 127 24 chr5 41645565 41645731 -161439801 + MIR SINE MIR 6 188 -74 435 266 130 11 chr5 41646803 41646980 -161438552 + MIR SINE MIR 21 218 -44 289 200 126 21 chr5 41647047 41647142 -161438390 - MIR SINE MIR -93 169 65 207 0 0 0 chr5 41647318 41647341 -161438191 + (A)n Simple_repeat Simple_repeat 1 23 0 186 133 0 0 chr5 41647397 41647427 -161438105 + (TTA)n Simple_repeat Simple_repeat 3 32 0 186 241 86 17 chr5 41647887 41647945 -161437587 + L2 LINE L2 3173 3234 -38 294 234 109 80 chr5 41648479 41648654 -161436878 - MIR SINE MIR 0 262 83 649 253 50 25 chr5 41648666 41648868 -161436664 - MIR SINE MIR 0 262 56 477 204 191 7 chr5 41648878 41649025 -161436507 - MIR SINE MIR 0 262 89 205 351 0 0 chr5 41649114 41649171 -161436361 - MIR SINE MIR -186 76 20 353 293 180 15 chr5 41649474 41649692 -161435840 - MIR SINE MIR 0 262 17 21 0 0 0 chr5 41649821 41649842 -161435690 + AT_rich Low_complexity Low_complexity 1 21 0 2155 115 7 7 chr5 41649970 41650265 -161435267 - AluSx SINE Alu -17 295 1 329 0 24 0 chr5 41650345 41650386 -161435146 + (CA)n Simple_repeat Simple_repeat 2 43 0 1880 160 0 7 chr5 41650755 41651049 -161434483 + AluJo SINE Alu 1 292 -20 22 0 0 0 chr5 41654218 41654240 -161431292 + AT_rich Low_complexity Low_complexity 1 22 0 858 273 12 24 chr5 41654275 41654524 -161431008 - MIR SINE MIR -12 250 5 338 311 8 17 chr5 41655227 41655346 -161430186 + MIR SINE MIR 3 120 -142 1721 150 0 69 chr5 41655400 41655739 -161429793 - AluJb SINE Alu 0 318 1 428 183 42 78 chr5 41655845 41655987 -161429545 + L2 LINE L2 2919 3055 -217 449 289 14 35 chr5 41656207 41656349 -161429183 + L2 LINE L2 3134 3272 0 394 219 148 16 chr5 41656354 41656482 -161429050 + MIR SINE MIR 106 250 -12 203 220 17 34 chr5 41656937 41656996 -161428536 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 191 270 9 130 chr5 41656997 41657112 -161428420 - L2 LINE L2 -97 3175 3075 266 298 29 10 chr5 41657161 41657265 -161428267 - L3b LINE CR1 -217 1366 1261 2093 140 89 6 chr5 41658065 41658423 -161427109 - MLT1B LTR MaLR 0 390 3 239 367 0 8 chr5 41658546 41658674 -161426858 + L2 LINE L2 2211 2337 -977 923 240 9 14 chr5 41659515 41659744 -161425788 - MIR SINE MIR 0 262 37 1907 190 49 57 chr5 41659854 41660360 -161425172 + MLT1D LTR MaLR 1 502 -3 446 286 8 8 chr5 41661292 41661425 -161424107 + MIR SINE MIR 2 134 -128 211 231 0 19 chr5 41661757 41661809 -161423723 - MIR SINE MIR -161 101 51 346 202 210 8 chr5 41662966 41663090 -161422442 + MER5A DNA MER1_type 41 189 0 200 241 17 0 chr5 41663501 41663559 -161421973 + (TA)n Simple_repeat Simple_repeat 2 60 0 270 250 0 52 chr5 41664184 41664280 -161421252 + L2 LINE L2 3213 3303 -10 7577 30 14 0 chr5 41664625 41665581 -161419951 + L1PA4 LINE L1 5185 6152 -3 24 0 0 0 chr5 41665581 41665605 -161419927 + AT_rich Low_complexity Low_complexity 1 24 0 489 250 136 59 chr5 41665658 41665894 -161419638 - MIR SINE MIR -1 261 8 753 239 160 52 chr5 41666106 41666412 -161419120 + LTR16C LTR ERVL 153 491 0 1769 175 7 10 chr5 41667468 41667765 -161417767 + AluJb SINE Alu 1 296 -16 2157 106 7 13 chr5 41667767 41668070 -161417462 + AluSg SINE Alu 1 301 -9 2235 113 7 0 chr5 41668738 41669038 -161416494 - AluSx SINE Alu -9 303 2 373 273 75 117 chr5 41669178 41669513 -161416019 + LTR67 LTR ERVL 3 318 -239 2916 79 72 10 chr5 41669513 41669886 -161415646 + MLT2A1 LTR ERVL 3 406 -38 549 0 0 0 chr5 41669886 41669947 -161415585 + (TA)n Simple_repeat Simple_repeat 2 62 0 2916 79 72 10 chr5 41669947 41669989 -161415543 + MLT2A1 LTR ERVL 406 444 0 373 273 75 117 chr5 41669989 41670082 -161415450 + LTR67 LTR ERVL 318 413 -144 21 0 0 0 chr5 41670405 41670426 -161415106 + AT_rich Low_complexity Low_complexity 1 21 0 272 246 69 54 chr5 41670830 41670960 -161414572 - MIR SINE MIR -15 247 116 197 33 33 0 chr5 41671147 41671177 -161414355 + (CA)n Simple_repeat Simple_repeat 1 31 0 187 244 0 0 chr5 41673097 41673138 -161412394 - MIR SINE MIR -124 138 98 273 259 42 167 chr5 41673951 41674214 -161411318 + L2 LINE L2 3016 3245 -27 204 340 49 64 chr5 41674228 41674431 -161411101 - L2 LINE L2 -1950 1364 1165 2291 205 93 76 chr5 41674842 41675477 -161410055 + MLT1E1 LTR MaLR 1 646 -8 2141 148 25 15 chr5 41675956 41676354 -161409178 + L1MA6 LINE L1 5890 6291 -9 641 177 122 83 chr5 41676427 41676608 -161408924 + MER20 DNA MER1_type 27 214 -5 16552 109 22 10 chr5 41676790 41679177 -161406355 - Tigger1 DNA MER2_type 0 2418 2 942 227 34 51 chr5 41679458 41679551 -161405981 - LTR16A1 LTR ERVL 0 457 364 2684 161 31 2 chr5 41679551 41680003 -161405529 - MLT1C LTR MaLR -2 465 1 942 227 34 51 chr5 41680003 41680204 -161405328 - LTR16A1 LTR ERVL -93 364 168 529 133 92 0 chr5 41680294 41680392 -161405140 - MER5A DNA MER1_type -52 137 31 225 100 0 0 chr5 41680392 41680422 -161405110 - Charlie1 DNA MER1_type -2731 30 1 329 164 86 103 chr5 41680426 41680542 -161404990 - LTR16A1 LTR ERVL -332 125 12 302 254 100 15 chr5 41680577 41680707 -161404825 - L2 LINE L2 -2874 440 300 884 145 0 0 chr5 41681639 41681763 -161403769 + FLAM_C SINE Alu 1 124 -19 381 22 0 0 chr5 41682368 41682414 -161403118 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1510 154 0 98 chr5 41682443 41682761 -161402771 - AluJb SINE Alu -25 287 1 236 183 32 75 chr5 41682896 41682989 -161402543 - L1ME4a LINE L1 -49 6072 5984 528 212 71 0 chr5 41683028 41683141 -161402391 + MIR SINE MIR 3 123 -139 2002 201 68 27 chr5 41683675 41684158 -161401374 - MLT1D LTR MaLR 0 505 3 1174 248 164 24 chr5 41685643 41686111 -161399421 - MLT1H1 LTR MaLR -7 548 15 393 306 64 0 chr5 41686160 41686317 -161399215 + MLT1L LTR MaLR 447 613 -2 216 0 0 0 chr5 41686711 41686735 -161398797 + (A)n Simple_repeat Simple_repeat 1 24 0 180 213 21 21 chr5 41686817 41686864 -161398668 - MER5C DNA MER1_type -263 61 15 195 310 0 0 chr5 41686918 41686976 -161398556 - L3b LINE CR1 -131 1452 1395 619 228 79 50 chr5 41687334 41687575 -161397957 - MLT1J LTR MaLR -35 476 229 2458 123 15 33 chr5 41687731 41688037 -161397495 - MLT1B LTR MaLR 0 390 91 2337 128 31 17 chr5 41688037 41688395 -161397137 - THE1B LTR MaLR -1 363 1 2458 123 15 33 chr5 41688395 41688485 -161397047 - MLT1B LTR MaLR -299 91 1 239 267 27 13 chr5 41688490 41688565 -161396967 - MLT1L LTR MaLR -537 78 3 776 290 48 0 chr5 41690027 41690279 -161395253 + HERVL LTR ERVL 2833 3096 -2558 304 282 0 45 chr5 41690375 41690485 -161395047 + HERVL LTR ERVL 3269 3373 -2391 1708 232 37 35 chr5 41690504 41690540 -161394992 - MLT1D LTR MaLR -14 491 457 1802 219 45 16 chr5 41690540 41691028 -161394504 + MLT1D LTR MaLR 1 502 -3 1708 232 37 35 chr5 41691028 41691479 -161394053 - MLT1D LTR MaLR -48 457 3 2057 147 0 13 chr5 41691518 41691831 -161393701 - AluSx SINE Alu -3 309 1 1307 278 78 27 chr5 41691833 41692397 -161393135 + HERVL LTR ERVL 3384 3976 -1788 568 241 28 0 chr5 41692402 41692543 -161392989 + MLT1G1 LTR MaLR 1 145 -450 1230 108 69 68 chr5 41692578 41692990 -161392542 + MER51A LTR ERV1 1 634 0 1176 237 128 6 chr5 41692991 41693350 -161392182 + MLT1G1 LTR MaLR 180 582 -13 1050 300 109 2 chr5 41693362 41693822 -161391710 + HERVL LTR ERVL 3981 4489 -1275 2126 110 0 20 chr5 41693953 41694252 -161391280 + AluSq SINE Alu 1 293 -20 2511 249 42 14 chr5 41694369 41695084 -161390448 + L1MEc LINE L1 49 783 -5613 189 0 0 0 chr5 41695166 41695187 -161390345 + (T)n Simple_repeat Simple_repeat 1 21 0 2776 206 2 58 chr5 41695582 41696183 -161389349 - MLT1F1 LTR MaLR 0 567 1 269 213 66 0 chr5 41698247 41698308 -161387224 - L2 LINE L2 -4 3309 3245 23 0 0 0 chr5 41698438 41698461 -161387071 + AT_rich Low_complexity Low_complexity 1 23 0 305 277 43 0 chr5 41699126 41699220 -161386312 - MIR SINE MIR -29 233 136 350 102 0 0 chr5 41699227 41699299 -161386233 - Alu SINE Alu 0 306 235 321 219 158 0 chr5 41699568 41699682 -161385850 + Charlie4a DNA MER1_type 138 269 -239 4366 175 149 65 chr5 41699682 41701248 -161384284 + pTR5 LTR ERV1 742 2438 0 1014 183 20 48 chr5 41701248 41701271 -161384261 + Charlie4a DNA MER1_type 264 286 -1675 2527 104 31 8 chr5 41701271 41701657 -161383875 + MER48 LTR ERV1 1 395 -3 1014 183 20 48 chr5 41701657 41701885 -161383647 + Charlie4a DNA MER1_type 286 508 0 234 286 39 0 chr5 41701992 41702069 -161383463 + MLT1J LTR MaLR 274 353 -158 1810 139 114 18 chr5 41702286 41702618 -161382914 - THE1B LTR MaLR 0 364 1 184 349 89 77 chr5 41703195 41703430 -161382102 + L2 LINE L2 2940 3177 -95 687 279 37 40 chr5 41704242 41704514 -161381018 - LTR16C LTR ERVL 0 491 221 2021 162 0 0 chr5 41704557 41704853 -161380679 + AluJb SINE Alu 1 296 -16 233 176 20 0 chr5 41706240 41706291 -161379241 - MLT2F LTR ERVL 0 663 612 228 135 0 0 chr5 41706298 41706335 -161379197 + (TG)n Simple_repeat Simple_repeat 1 37 0 771 165 61 30 chr5 41706537 41706701 -161378831 - MLT1E3 LTR MaLR -393 231 63 463 281 14 7 chr5 41706714 41706860 -161378672 - MLT2F LTR ERVL -516 147 1 2453 153 22 7 chr5 41707251 41707707 -161377825 - L1MB3 LINE L1 -2 6181 5719 1091 131 24 34 chr5 41707709 41707915 -161377617 - L1MB3 LINE L1 -528 5643 5440 313 203 76 114 chr5 41708270 41708428 -161377104 - MLT1H LTR MaLR -243 306 155 28 29 0 0 chr5 41710437 41710472 -161375060 + AT_rich Low_complexity Low_complexity 1 35 0 1697 161 6 46 chr5 41710764 41711087 -161374445 + AluJo SINE Alu 1 310 -2 198 0 0 0 chr5 41712263 41712285 -161373247 + (TG)n Simple_repeat Simple_repeat 2 23 0 1795 108 4 0 chr5 41712477 41712736 -161372796 - L1PB1 LINE L1 -13 6138 5879 1632 164 36 11 chr5 41712913 41713187 -161372345 + AluJo SINE Alu 12 292 -20 596 276 103 13 chr5 41713453 41713811 -161371721 - LTR33A LTR ERVL 0 523 135 1349 209 100 31 chr5 41713828 41714018 -161371514 - MLT1A2 LTR MaLR 0 374 198 198 0 0 0 chr5 41714018 41714040 -161371492 + (GA)n Simple_repeat Simple_repeat 1 22 0 1349 209 100 31 chr5 41714040 41714199 -161371333 - MLT1A2 LTR MaLR -176 198 1 401 286 100 14 chr5 41714296 41714436 -161371096 - MIR SINE MIR -79 183 32 2262 110 0 0 chr5 41714653 41714952 -161370580 + AluSx SINE Alu 2 300 -12 397 325 162 4 chr5 41715604 41715838 -161369694 + L2 LINE L2 758 1028 -2286 25 0 0 0 chr5 41716047 41716072 -161369460 + AT_rich Low_complexity Low_complexity 1 25 0 485 147 20 29 chr5 41716213 41716315 -161369217 - MLT1I LTR MaLR 0 409 309 323 352 0 9 chr5 41716605 41716710 -161368822 - L1ME LINE L1 -379 5791 5688 251 333 36 0 chr5 41716712 41716823 -161368709 - MIR SINE MIR 0 262 148 274 346 122 10 chr5 41717145 41717440 -161368092 + LTR16C LTR ERVL 156 483 -8 718 290 103 38 chr5 41717454 41717684 -161367848 + LTR16A LTR ERVL 16 284 -166 2454 145 52 5 chr5 41717684 41718091 -161367441 + MSTB LTR MaLR 1 426 0 718 290 103 38 chr5 41718091 41718256 -161367276 + LTR16A LTR ERVL 284 437 -13 299 321 80 11 chr5 41718665 41718852 -161366680 + ERVL LTR ERVL 4462 4661 -1103 1395 151 35 8 chr5 41718856 41719115 -161366417 + L1MB4 LINE L1 5915 6180 0 22 0 0 0 chr5 41719209 41719231 -161366301 + AT_rich Low_complexity Low_complexity 1 22 0 1964 148 0 23 chr5 41719253 41719558 -161365974 - AluSg SINE Alu -12 298 1 436 172 20 0 chr5 41721496 41721595 -161363937 - L1MA10 LINE L1 -9 6325 6225 4413 190 89 124 chr5 41721596 41721689 -161363843 - L1ME LINE L1 -595 5571 5476 1689 182 90 27 chr5 41721689 41722090 -161363442 + MSTC LTR MaLR 3 428 0 4413 190 89 124 chr5 41722090 41722112 -161363420 - L1ME LINE L1 -690 5476 5455 2545 72 3 0 chr5 41722112 41722419 -161363113 + AluSp SINE Alu 1 308 -5 4413 190 89 124 chr5 41722419 41723278 -161362254 - L1ME LINE L1 -711 5455 4567 1319 180 16 25 chr5 41723278 41723523 -161362009 - AluJb SINE Alu -69 243 1 4413 190 89 124 chr5 41723523 41724830 -161360702 - L1ME LINE L1 -1599 4567 3152 764 241 79 0 chr5 41724827 41725055 -161360477 - L1ME LINE L1 -3493 2653 2408 * 21 0 0 0 chr5 41725072 41725093 -161360439 + AT_rich Low_complexity Low_complexity 1 21 0 219 269 356 0 chr5 41725115 41725219 -161360313 + MIR3 SINE MIR 34 174 -34 28 61 0 0 chr5 41725439 41725488 -161360044 + AT_rich Low_complexity Low_complexity 1 49 0 265 197 14 0 chr5 41725616 41725687 -161359845 - L1M4 LINE L1 -3257 2889 2818 472 248 26 9 chr5 41725689 41725802 -161359730 - MIR SINE MIR -146 116 2 2016 173 9 3 chr5 41726093 41726435 -161359097 + MER2 DNA MER2_type 1 344 0 2289 95 3 13 chr5 41726507 41726823 -161358709 - AluSp SINE Alu 0 313 1 463 321 166 33 chr5 41727004 41727365 -161358167 - MLT1K LTR MaLR -18 570 162 1506 157 196 35 chr5 41727729 41727925 -161357607 + MLT1C LTR MaLR 1 164 -303 1979 131 70 12 chr5 41727925 41728254 -161357278 - MER7A DNA MER2_type 0 346 1 1506 157 196 35 chr5 41728254 41728459 -161357073 + MLT1C LTR MaLR 164 467 0 14168 32 10 1 chr5 41728597 41731085 -161354447 + L1PA4 LINE L1 3634 6155 0 246 250 0 33 chr5 41731438 41731498 -161354034 + L2 LINE L2 3146 3203 -69 216 319 72 14 chr5 41731675 41731744 -161353788 + L2 LINE L2 3151 3223 -49 325 298 67 94 chr5 41732686 41733028 -161352504 + HAL1 LINE L1 971 1303 -1204 1782 226 93 15 chr5 41733099 41733573 -161351959 + MLT1G1 LTR MaLR 85 595 0 332 283 10 0 chr5 41733883 41733982 -161351550 + L1ME3A LINE L1 5501 5600 -2395 566 303 124 3 chr5 41733986 41734276 -161351256 + L1ME3A LINE L1 5561 5885 -285 33 66 0 0 chr5 41734415 41734476 -161351056 + AT_rich Low_complexity Low_complexity 1 61 0 2075 123 48 31 chr5 41734552 41734910 -161350622 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 41736429 41736458 -161349074 + AT_rich Low_complexity Low_complexity 1 29 0 259 228 198 0 chr5 41736707 41736808 -161348724 + MIR SINE MIR 118 238 -24 22 0 0 0 chr5 41737284 41737306 -161348226 + AT_rich Low_complexity Low_complexity 1 22 0 1206 244 85 48 chr5 41737344 41737772 -161347760 + L1MC4 LINE L1 7443 7899 -143 2380 105 0 3 chr5 41737772 41738085 -161347447 + AluSx SINE Alu 1 312 0 1206 244 85 48 chr5 41738085 41738222 -161347310 + L1MC4 LINE L1 7899 8029 -13 24 0 0 0 chr5 41738541 41738565 -161346967 + AT_rich Low_complexity Low_complexity 1 24 0 328 310 44 51 chr5 41738597 41738755 -161346777 + MIR SINE MIR 106 262 0 1005 177 68 0 chr5 41739100 41739292 -161346240 - MSTD LTR MaLR -12 384 180 6073 145 26 23 chr5 41739303 41741422 -161344110 - L1PB2 LINE L1 -3 6148 4027 230 103 10 124 chr5 41741674 41741771 -161343761 + L1MA2 LINE L1 6218 6303 -1 1807 256 75 17 chr5 41741771 41742290 -161343242 + MLT1H1 LTR MaLR 7 555 0 442 255 64 64 chr5 41742794 41742928 -161342604 + MIR SINE MIR 50 186 -76 2129 102 10 0 chr5 41742928 41743221 -161342311 + AluSq SINE Alu 1 296 -17 442 255 64 64 chr5 41743221 41743243 -161342289 + MIR SINE MIR 185 206 -56 200 219 0 24 chr5 41743340 41743381 -161342151 - L2 LINE L2 -18 3254 3215 287 85 21 0 chr5 41743967 41744014 -161341518 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 383 263 10 25 chr5 41744015 41744422 -161341110 + GA-rich Low_complexity Low_complexity 1 401 0 9290 196 13 20 chr5 41744526 41746621 -161338911 - L1 LINE L1 -1538 4608 2527 605 254 3 0 chr5 41746631 41746776 -161338756 - MSTC LTR MaLR -217 148 1 197 283 33 0 chr5 41746776 41746836 -161338696 - L2 LINE L2 -1689 1625 1564 1709 279 11 15 chr5 41746902 41747376 -161338156 - L2 LINE L2 -1956 1358 887 1670 169 36 0 chr5 41747380 41747659 -161337873 + AluJb SINE Alu 13 301 -11 375 161 0 32 chr5 41747663 41747756 -161337776 + GA-rich Low_complexity Low_complexity 1 90 0 2016 253 76 83 chr5 41748226 41748461 -161337071 - L2 LINE L2 -2462 852 617 1677 140 32 3 chr5 41748461 41748769 -161336763 + L1MA9 LINE L1 5992 6308 -4 2016 253 76 83 chr5 41748769 41749391 -161336141 - L2 LINE L2 -2697 617 1 266 200 0 17 chr5 41749699 41749759 -161335773 - L1M4 LINE L1 -1514 4632 4574 185 231 0 0 chr5 41749773 41749812 -161335720 + L2 LINE L2 3275 3313 0 1728 144 65 44 chr5 41750718 41751085 -161334447 + THE1C LTR MaLR 1 375 0 1850 147 14 0 chr5 41751291 41751603 -161333929 - AluSx SINE Alu 0 316 1 2220 131 0 0 chr5 41751745 41752057 -161333475 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 41752057 41752080 -161333452 + AT_rich Low_complexity Low_complexity 1 23 0 2351 79 0 0 chr5 41752430 41752721 -161332811 + AluSg SINE Alu 1 291 -19 201 196 0 0 chr5 41752758 41752804 -161332728 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 463 274 99 61 chr5 41754230 41754493 -161331039 + MLT1L LTR MaLR 1 273 -342 227 296 17 17 chr5 41754627 41754742 -161330790 + MLT1L LTR MaLR 497 611 -4 766 107 23 38 chr5 41754830 41754961 -161330571 + AluJo SINE Alu 5 133 -169 1995 98 16 70 chr5 41754972 41755288 -161330244 + AluSx SINE Alu 1 299 -13 445 309 13 26 chr5 41755586 41755738 -161329794 + MER5A DNA MER1_type 1 150 -39 740 277 92 15 chr5 41756802 41757073 -161328459 - MER102b DNA MER1_type -45 296 5 22 35 0 0 chr5 41757156 41757185 -161328347 + AT_rich Low_complexity Low_complexity 1 29 0 1508 164 19 7 chr5 41757779 41758097 -161327435 + MER33 DNA MER1_type 1 315 -9 248 319 237 16 chr5 41758679 41758996 -161326536 + L2 LINE L2 2805 3191 -122 208 319 0 0 chr5 41759045 41759092 -161326440 - MER91 DNA MER1_type 0 140 94 242 188 21 0 chr5 41759134 41759182 -161326350 + L2 LINE L2 3264 3312 -1 333 242 140 34 chr5 41760310 41760488 -161325044 - MIR SINE MIR -14 248 52 300 386 0 8 chr5 41760846 41760973 -161324559 + MIR SINE MIR 4 129 -133 6465 128 38 32 chr5 41760973 41761529 -161324003 - L1M1 LINE L1 -591 5712 5161 2095 152 113 0 chr5 41761529 41761911 -161323621 - MSTA LTR MaLR -3 425 1 6465 128 38 32 chr5 41761911 41762202 -161323330 - L1M1 LINE L1 -1142 5161 4873 906 210 0 0 chr5 41762202 41762364 -161323168 + AluJo SINE Alu 138 299 -3 6465 128 38 32 chr5 41762364 41763071 -161322461 - L1M1 LINE L1 -1430 4873 4157 22 56 0 0 chr5 41763877 41763913 -161321619 + AT_rich Low_complexity Low_complexity 1 36 0 2257 101 7 3 chr5 41764213 41764519 -161321013 - AluSq SINE Alu -3 310 4 872 184 0 7 chr5 41764816 41764968 -161320564 + FAM SINE Alu 1 151 -34 263 106 0 0 chr5 41765121 41765168 -161320364 + AluSp/q SINE Alu 255 301 -2 903 269 106 36 chr5 41765564 41765950 -161319582 + L2 LINE L2 2473 2885 -429 271 235 54 84 chr5 41766167 41766333 -161319199 + L2 LINE L2 3076 3236 -77 790 260 194 25 chr5 41766366 41766732 -161318800 + L2 LINE L2 2886 3313 0 189 256 0 0 chr5 41767997 41768036 -161317496 - L2 LINE L2 -604 2710 2672 22 35 0 0 chr5 41768257 41768286 -161317246 + AT_rich Low_complexity Low_complexity 1 29 0 41 0 0 19 chr5 41768382 41768415 -161317117 + AT_rich Low_complexity Low_complexity 1 34 -17 1773 155 7 7 chr5 41768415 41768699 -161316833 - AluJb SINE Alu -28 284 1 41 0 0 19 chr5 41768699 41768717 -161316815 + AT_rich Low_complexity Low_complexity 34 51 0 318 329 13 24 chr5 41768765 41768933 -161316599 + L1ME LINE L1 5550 5722 -399 420 293 63 37 chr5 41769444 41769700 -161315832 + L1ME4a LINE L1 5175 5422 -747 29945 71 8 10 chr5 41769786 41774749 -161310783 + L1PA6 LINE L1 1205 6152 -2 866 253 123 39 chr5 41774911 41775317 -161310215 + L1ME4a LINE L1 5511 5978 -143 180 111 0 0 chr5 41775317 41775344 -161310188 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 866 253 123 39 chr5 41775344 41775498 -161310034 + L1ME4a LINE L1 5978 6118 -3 1367 102 44 27 chr5 41776116 41776341 -161309191 + MER30 DNA MER1_type 1 229 -1 2083 101 16 10 chr5 41776750 41777058 -161308474 - AluSx SINE Alu -2 310 1 2151 82 0 7 chr5 41777624 41777904 -161307628 - AluSx SINE Alu -18 294 17 220 378 92 18 chr5 41778069 41778233 -161307299 - MIR3 SINE MIR -31 177 2 24 0 0 0 chr5 41778274 41778298 -161307234 + AT_rich Low_complexity Low_complexity 1 24 0 1290 151 0 32 chr5 41778763 41778982 -161306550 + AluJo SINE Alu 93 304 -8 448 258 15 8 chr5 41779100 41779232 -161306300 - MIR SINE MIR 0 262 130 1487 175 42 21 chr5 41779245 41779530 -161306002 - AluJo SINE Alu -18 294 4 220 299 45 0 chr5 41779534 41779601 -161305931 - MIR SINE MIR -106 156 87 312 70 0 0 chr5 41780126 41780169 -161305363 + (TG)n Simple_repeat Simple_repeat 1 43 0 317 250 24 0 chr5 41780592 41780676 -161304856 - L1ME4a LINE L1 -1 6120 6035 414 258 10 0 chr5 41781401 41781498 -161304034 + MER103 DNA DNA 32 129 -37 267 222 111 0 chr5 41781834 41781897 -161303635 - L2 LINE L2 -2 3270 3201 25 0 0 0 chr5 41781929 41781954 -161303578 + AT_rich Low_complexity Low_complexity 1 25 0 493 289 165 19 chr5 41782397 41782760 -161302772 - L1M4 LINE L1 -2185 3961 3546 253 219 171 29 chr5 41782846 41782951 -161302581 - L1ME4a LINE L1 -35 6086 5967 295 261 103 82 chr5 41783291 41783486 -161302046 - L2 LINE L2 0 3313 3115 741 295 62 93 chr5 41783496 41784012 -161301520 - L2 LINE L2 -386 2928 2429 1739 177 20 0 chr5 41784214 41784508 -161301024 + AluJo SINE Alu 1 300 -12 1642 97 62 0 chr5 41784691 41784918 -161300614 - AluSx SINE Alu -69 243 3 4400 163 45 37 chr5 41785750 41787032 -161298500 - L1MB8 LINE L1 0 6178 4903 1635 159 20 33 chr5 41787200 41787502 -161298030 - AluJo SINE Alu -14 298 1 1413 135 24 0 chr5 41788377 41788585 -161296947 - AluSx SINE Alu -95 217 5 2366 64 0 0 chr5 41789555 41789866 -161295666 - AluY SINE Alu 0 311 1 511 161 89 16 chr5 41790229 41790353 -161295179 + FLAM_C SINE Alu 1 133 0 2702 95 5 18 chr5 41790540 41790929 -161294603 - LTR8 LTR ERV1 -105 586 203 24 0 0 0 chr5 41791505 41791529 -161294003 + AT_rich Low_complexity Low_complexity 1 24 0 677 237 81 21 chr5 41793038 41793274 -161292258 + MER112 DNA MER1_type 11 260 0 2409 71 3 0 chr5 41793692 41794000 -161291532 + AluY SINE Alu 1 309 -2 22 35 0 0 chr5 41795266 41795295 -161290237 + AT_rich Low_complexity Low_complexity 1 29 0 213 204 23 0 chr5 41796016 41796060 -161289472 + L2 LINE L2 3264 3308 -5 323 244 233 35 chr5 41796427 41796714 -161288818 - L2 LINE L2 -3 3310 2967 241 258 45 11 chr5 41796767 41796856 -161288676 - L2 LINE L2 -509 2805 2714 186 103 0 0 chr5 41797986 41798015 -161287517 + (CGG)n Simple_repeat Simple_repeat 2 30 0 180 111 0 0 chr5 41798318 41798345 -161287187 + (GGA)n Simple_repeat Simple_repeat 1 27 0 201 39 0 0 chr5 41798529 41798555 -161286977 + (CGG)n Simple_repeat Simple_repeat 1 26 0 496 262 81 0 chr5 41802770 41802942 -161282590 - MIR SINE MIR -6 256 71 480 350 38 0 chr5 41803335 41803601 -161281931 - MARNA DNA Mariner -22 564 289 348 197 0 0 chr5 41803752 41803813 -161281719 - MIR SINE MIR -130 132 72 397 366 47 5 chr5 41803877 41804068 -161281464 - MIR SINE MIR -62 200 2 32 0 0 0 chr5 41804680 41804712 -161280820 + AT_rich Low_complexity Low_complexity 1 32 0 30 45 0 0 chr5 41805220 41805264 -161280268 + AT_rich Low_complexity Low_complexity 1 44 0 228 404 33 20 chr5 41805884 41806035 -161279497 + L2 LINE L2 3109 3261 -11 490 197 72 33 chr5 41807945 41807965 -161277567 - L1MA10 LINE L1 0 6334 6315 1548 160 86 6 chr5 41807965 41808278 -161277254 - L1ME1 LINE L1 -7 6159 5822 511 292 123 77 chr5 41808862 41809424 -161276108 + L2 LINE L2 1984 2571 -743 314 140 0 0 chr5 41810373 41810423 -161275109 + L2 LINE L2 3264 3313 0 21 0 0 0 chr5 41811085 41811106 -161274426 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 41811334 41811362 -161274170 + AT_rich Low_complexity Low_complexity 1 28 0 565 209 80 86 chr5 41811417 41811719 -161273813 - L1ME4a LINE L1 -246 5875 5576 2361 91 3 0 chr5 41812331 41812640 -161272892 + AluY SINE Alu 1 310 -1 197 333 67 0 chr5 41812973 41813078 -161272454 - L2 LINE L2 -479 2835 2724 6424 32 4 3 chr5 41813529 41814299 -161271233 + L1PA5 LINE L1 5383 6153 -1 21 0 0 0 chr5 41814623 41814644 -161270888 + AT_rich Low_complexity Low_complexity 1 21 0 194 193 18 0 chr5 41815798 41815855 -161269677 + (TA)n Simple_repeat Simple_repeat 2 59 0 4677 188 48 14 chr5 41816360 41817948 -161267584 - L1MB7 LINE L1 -38 6146 4613 1776 151 10 10 chr5 41817948 41818247 -161267285 - AluSx SINE Alu -13 299 1 4677 188 48 14 chr5 41818247 41818357 -161267175 - L1MB7 LINE L1 -1571 4613 4508 2172 116 0 3 chr5 41818357 41818649 -161266883 - AluSg SINE Alu -19 291 1 4677 188 48 14 chr5 41818649 41818768 -161266764 - L1MB7 LINE L1 -1676 4508 4265 208 250 0 19 chr5 41819232 41819284 -161266248 + GA-rich Low_complexity Low_complexity 4 54 0 317 258 41 41 chr5 41819762 41819859 -161265673 - MIR SINE MIR -131 131 35 2241 101 10 0 chr5 41819859 41820155 -161265377 - AluSp SINE Alu -13 300 2 371 252 98 35 chr5 41821403 41821477 -161264055 - MIR SINE MIR -21 241 173 976 227 147 3 chr5 41821477 41821777 -161263755 - MER2 DNA MER2_type -1 343 1 371 252 98 35 chr5 41821777 41821845 -161263687 - MIR SINE MIR -89 173 90 272 319 53 11 chr5 41821920 41822014 -161263518 + L2 LINE L2 3151 3248 -24 221 0 35 0 chr5 41822014 41822043 -161263489 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 334 353 17 92 chr5 41822131 41822289 -161263243 + L2 LINE L2 2936 3054 -218 6462 181 18 24 chr5 41822289 41822846 -161262686 - L1PA15 LINE L1 -2 6163 5604 2303 107 3 0 chr5 41822846 41823154 -161262378 - AluSp SINE Alu -4 309 1 6462 181 18 24 chr5 41823154 41824776 -161260756 - L1PA15 LINE L1 -561 5604 3990 334 353 17 92 chr5 41824776 41824977 -161260555 + L2 LINE L2 3053 3268 -4 2081 107 3 7 chr5 41825534 41825824 -161259708 + AluSg SINE Alu 1 289 -21 1570 231 95 54 chr5 41825829 41826344 -161259188 - MLT1F1 LTR MaLR -6 561 1 252 0 0 0 chr5 41826429 41826457 -161259075 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 2473 65 3 7 chr5 41827083 41827389 -161258143 - AluY SINE Alu -6 305 1 368 239 15 4 chr5 41828474 41828560 -161256972 - MER5A DNA MER1_type -81 106 12 25 0 0 0 chr5 41828784 41828809 -161256723 + AT_rich Low_complexity Low_complexity 1 25 0 364 246 82 41 chr5 41830773 41830944 -161254588 + L1ME LINE L1 5551 5728 -393 2186 115 0 0 chr5 41831140 41831435 -161254097 + AluSc SINE Alu 1 295 -14 263 302 44 137 chr5 41832725 41833040 -161252492 + L2 LINE L2 2977 3262 -10 510 361 108 24 chr5 41833217 41833802 -161251730 - L2 LINE L2 -466 2848 2215 2185 88 14 3 chr5 41833850 41834146 -161251386 - AluSx SINE Alu -11 301 3 933 193 181 40 chr5 41834261 41834665 -161250867 + L1MC4 LINE L1 7480 7940 -102 1476 173 61 17 chr5 41834726 41835021 -161250511 - AluJo SINE Alu -4 308 1 289 280 29 115 chr5 41835270 41835549 -161249983 - MLT1I LTR MaLR -50 359 105 2016 127 87 0 chr5 41835725 41836057 -161249475 + MER46B DNA MER2_type 1 236 0 27 43 5 0 chr5 41836293 41836378 -161249154 + AT_rich Low_complexity Low_complexity 1 48 0 23 33 0 0 chr5 41836615 41836645 -161248887 + AT_rich Low_complexity Low_complexity 1 30 0 13887 42 8 41 chr5 41837852 41840530 -161245002 - L1PA5 LINE L1 -5 6149 3528 666 218 0 0 chr5 41840756 41840880 -161244652 - FLAM_A SINE Alu -5 128 5 318 216 21 21 chr5 41841670 41841767 -161243765 - MER113 DNA MER1_type? -393 128 32 2259 99 0 3 chr5 41843270 41843574 -161241958 - AluSx SINE Alu -9 303 1 1944 106 0 62 chr5 41844393 41844713 -161240819 + AluSc SINE Alu 1 300 -9 30 59 0 0 chr5 41845607 41845658 -161239874 + AT_rich Low_complexity Low_complexity 1 51 0 444 267 37 14 chr5 41845779 41845900 -161239632 + MIR SINE MIR 8 128 -80 274 242 132 22 chr5 41845923 41846014 -161239518 + L2 LINE L2 3211 3311 -2 194 352 22 22 chr5 41846009 41846100 -161239432 + MIR SINE MIR 151 241 -21 * 200 219 0 24 chr5 41846499 41846540 -161238992 + L2 LINE L2 3215 3254 -18 471 259 57 63 chr5 41846637 41846659 -161238873 - MIR SINE MIR -56 206 185 2094 105 10 0 chr5 41846659 41846953 -161238579 - AluSq SINE Alu -16 297 1 471 259 57 63 chr5 41846953 41847088 -161238444 - MIR SINE MIR -77 185 50 1909 251 69 28 chr5 41847595 41848106 -161237426 - MLT1H1 LTR MaLR 0 555 20 522 125 0 0 chr5 41848106 41848194 -161237338 - L1MA3 LINE L1 0 6305 6218 1909 251 69 28 chr5 41848194 41848215 -161237317 - MLT1H1 LTR MaLR -535 20 1 1648 220 222 10 chr5 41848727 41849245 -161236287 - L2 LINE L2 -513 2801 2174 675 126 45 0 chr5 41849260 41849371 -161236161 - AluSq/x SINE Alu -196 116 1 539 239 172 18 chr5 41849429 41849592 -161235940 + MIR3 SINE MIR 14 201 -7 2818 228 93 13 chr5 41849944 41850703 -161234829 - L1ME1 LINE L1 -6 6160 5341 * 8767 232 92 29 chr5 41850701 41852703 -161232829 - L1MDa LINE L1 -743 5472 3203 1791 181 3 0 chr5 41852703 41853006 -161232526 - AluJb SINE Alu -8 304 1 8767 232 92 29 chr5 41853006 41854125 -161231407 - L1MDa LINE L1 -3012 3203 2156 880 184 12 6 chr5 41854166 41854329 -161231203 - FAM SINE Alu -2 47 1 294 211 13 13 chr5 41854393 41854469 -161231063 - L1MDa LINE L1 -4301 2095 2020 25 0 0 0 chr5 41855000 41855025 -161230507 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 41855640 41855664 -161229868 + AT_rich Low_complexity Low_complexity 1 24 0 1052 228 216 15 chr5 41856360 41856684 -161228848 + L2 LINE L2 974 1362 -1952 495 282 121 29 chr5 41856731 41856937 -161228595 + L2 LINE L2 1818 2042 -1272 1185 222 80 44 chr5 41857025 41857413 -161228119 - MLT1C LTR MaLR 0 467 66 447 244 113 48 chr5 41857484 41857651 -161227881 - L1MC4a LINE L1 -1485 6323 6136 1813 141 60 15 chr5 41857651 41857984 -161227548 + MER7A DNA MER2_type 1 346 0 447 244 113 48 chr5 41857984 41858046 -161227486 - L1MC4a LINE L1 -1672 6136 6079 351 241 35 17 chr5 41858161 41858277 -161227255 + MIR SINE MIR 118 235 -27 227 329 110 14 chr5 41859296 41859369 -161226163 - MER5A DNA MER1_type -19 170 91 321 224 56 9 chr5 41859796 41859903 -161225629 + L1MC4 LINE L1 7929 8040 -2 2230 228 71 34 chr5 41860062 41860398 -161225134 - L1MD2 LINE L1 -1 6358 6036 1657 194 17 0 chr5 41860398 41860687 -161224845 - AluJb SINE Alu -18 294 1 2230 228 71 34 chr5 41860687 41860970 -161224562 - L1MD2 LINE L1 -323 6036 5707 2066 154 62 31 chr5 41860970 41861354 -161224178 - MSTD LTR MaLR 0 396 1 2230 228 71 34 chr5 41861354 41861440 -161224092 - L1MD2 LINE L1 -652 5707 5626 619 211 83 19 chr5 41862100 41862256 -161223276 + MIR SINE MIR 90 255 -7 296 273 121 10 chr5 41862330 41862429 -161223103 + L2 LINE L2 3141 3250 -22 23 0 0 0 chr5 41863153 41863176 -161222356 + AT_rich Low_complexity Low_complexity 1 23 0 2158 119 3 0 chr5 41863540 41863850 -161221682 + AluSx SINE Alu 1 311 -1 1944 130 20 3 chr5 41863850 41864143 -161221389 + AluSx SINE Alu 1 298 -14 284 358 58 0 chr5 41864245 41864365 -161221167 + L3 LINE CR1 845 971 -606 448 211 13 0 chr5 41864472 41864548 -161220984 + MER2 DNA MER2_type 269 345 0 1157 257 64 18 chr5 41864549 41864989 -161220543 + L1M4 LINE L1 4252 4711 -1435 1513 241 151 50 chr5 41864994 41865688 -161219844 - L2 LINE L2 -1001 2313 1550 23 0 0 0 chr5 41865947 41865970 -161219562 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 41866559 41866580 -161218952 + AT_rich Low_complexity Low_complexity 1 21 0 397 237 9 130 chr5 41867728 41867943 -161217589 + LTR41 LTR ERVL 552 740 -33 253 235 0 15 chr5 41867952 41868020 -161217512 + L1MC4 LINE L1 6648 6714 -1328 235 311 94 9 chr5 41868135 41868241 -161217291 + MIR SINE MIR 1 115 -147 300 364 38 3 chr5 41868343 41868468 -161217064 + MIR SINE MIR 40 177 -31 310 318 58 29 chr5 41868554 41868727 -161216805 + L2 LINE L2 2175 2352 -962 279 247 62 62 chr5 41869556 41869653 -161215879 + L2 LINE L2 3169 3265 -7 701 234 102 15 chr5 41870443 41870640 -161214892 - MIR SINE MIR -12 250 37 463 200 158 61 chr5 41870773 41870938 -161214594 + MIR SINE MIR 38 218 -44 466 269 102 23 chr5 41870948 41871164 -161214368 - L1ME LINE L1 -385 5736 5504 278 302 16 32 chr5 41871724 41871850 -161213682 - MIR SINE MIR -14 248 125 372 164 0 0 chr5 41873413 41873480 -161212052 + (TG)n Simple_repeat Simple_repeat 2 68 0 664 291 145 0 chr5 41874673 41874900 -161210632 + MIR SINE MIR 2 261 -1 2208 63 7 40 chr5 41877336 41877636 -161207896 + AluSc SINE Alu 3 292 -17 23 0 0 0 chr5 41877761 41877784 -161207748 + AT_rich Low_complexity Low_complexity 1 23 0 2363 106 0 0 chr5 41878014 41878325 -161207207 - AluSx SINE Alu -1 311 1 2347 94 0 0 chr5 41879101 41879400 -161206132 + AluSq SINE Alu 1 299 -14 24 0 0 0 chr5 41880104 41880128 -161205404 + AT_rich Low_complexity Low_complexity 1 24 0 1924 149 3 3 chr5 41880323 41880631 -161204901 + AluJb SINE Alu 1 308 -4 887 127 7 14 chr5 41881349 41881491 -161204041 + FLAM_C SINE Alu 1 141 -2 246 323 115 31 chr5 41881923 41882019 -161203513 - L3 LINE CR1 -34 1543 1440 23 0 0 0 chr5 41882269 41882292 -161203240 + AT_rich Low_complexity Low_complexity 1 23 0 374 332 71 58 chr5 41882315 41882610 -161202922 + L3 LINE CR1 1263 1561 -16 24 0 0 0 chr5 41882639 41882663 -161202869 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 41883735 41883758 -161201774 + AT_rich Low_complexity Low_complexity 1 23 0 1766 163 42 9 chr5 41884031 41884363 -161201169 - MER2 DNA MER2_type 0 344 2 1588 189 50 0 chr5 41884918 41885198 -161200334 + AluJb SINE Alu 1 294 -18 5217 181 53 9 chr5 41885572 41887211 -161198321 + L1MA4 LINE L1 4554 6296 -4 353 292 102 31 chr5 41887515 41888107 -161197425 - L1MC5 LINE L1 -350 7611 7146 24 91 0 0 chr5 41888357 41888423 -161197109 + AT_rich Low_complexity Low_complexity 1 66 0 319 250 69 94 chr5 41888513 41888673 -161196859 + L1MC/D LINE L1 5317 5472 -2336 350 260 39 55 chr5 41888838 41889019 -161196513 + L1MC/D LINE L1 3545 3722 -2424 435 221 0 0 chr5 41889092 41889178 -161196354 - FLAM_A SINE Alu -10 132 47 1815 156 29 16 chr5 41889216 41889524 -161196008 + AluJb SINE Alu 1 312 0 1685 95 68 4 chr5 41889718 41889970 -161195562 + AluY SINE Alu 33 300 -11 700 227 0 0 chr5 41889978 41890106 -161195426 + FLAM_A SINE Alu 1 128 -5 1167 286 100 20 chr5 41890128 41891049 -161194483 + L1MC/D LINE L1 4034 5045 -1101 694 277 156 12 chr5 41891080 41891495 -161194037 + L1MC/D LINE L1 5352 5823 -361 1635 177 33 13 chr5 41891502 41891801 -161193731 + AluJo SINE Alu 3 307 -5 198 0 0 0 chr5 41891809 41891831 -161193701 + (TA)n Simple_repeat Simple_repeat 1 22 0 635 161 131 8 chr5 41892633 41892763 -161192769 + MER58C DNA MER1_type 70 215 0 21 36 0 0 chr5 41894726 41894754 -161190778 + AT_rich Low_complexity Low_complexity 1 28 0 2020 69 0 42 chr5 41894754 41894867 -161190665 - L1PA8 LINE L1 -4 6168 6052 2387 76 0 10 chr5 41894867 41895171 -161190361 - AluSg SINE Alu -9 301 1 2020 69 0 42 chr5 41895171 41895346 -161190186 - L1PA8 LINE L1 -120 6052 5892 405 285 145 35 chr5 41895829 41896029 -161189503 + MIR SINE MIR 9 230 -32 206 294 156 28 chr5 41896963 41897072 -161188460 + MIR3 SINE MIR 45 167 -41 5624 173 23 6 chr5 41899003 41901015 -161184517 - L1PA16 LINE L1 -1 6165 4126 2059 171 3 3 chr5 41901831 41902175 -161183357 + MER7A DNA MER2_type 2 343 -3 833 115 0 23 chr5 41908448 41908578 -161176954 - FLAM_C SINE Alu -2 131 5 464 173 333 0 chr5 41908712 41908868 -161176664 - MER3 DNA MER1_type -1 208 1 186 240 0 0 chr5 41909728 41909778 -161175754 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 214 358 15 0 chr5 41910389 41910456 -161175076 + L2 LINE L2 3200 3267 -5 2005 121 0 4 chr5 41910986 41911266 -161174266 + AluSx SINE Alu 29 307 -5 22 35 0 0 chr5 41912386 41912415 -161173117 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 41913149 41913184 -161172348 + AT_rich Low_complexity Low_complexity 1 35 0 696 215 8 0 chr5 41913923 41914053 -161171479 - FRAM SINE Alu -17 159 29 2253 71 4 0 chr5 41914114 41914436 -161171096 - AluY SINE Alu 0 323 1 205 205 0 0 chr5 41916813 41916852 -161168680 + (TA)n Simple_repeat Simple_repeat 2 40 0 742 256 82 85 chr5 41917443 41917736 -161167796 - L2 LINE L2 -4 3268 2977 869 107 0 0 chr5 41919933 41920045 -161165487 + FLAM_C SINE Alu 6 117 -26 394 309 94 39 chr5 41920831 41921012 -161164520 - MER117 DNA MER1_type 0 197 7 402 328 30 30 chr5 41922980 41923114 -161162418 - L2 LINE L2 -1 3312 3179 827 283 58 37 chr5 41923394 41923859 -161161673 - LTR33 LTR ERVL 0 521 6 396 244 0 12 chr5 41924803 41924885 -161160647 + Tigger7 DNA MER2_type 2 82 -257 * 908 161 124 5 chr5 41924882 41925075 -161160457 + Tigger7 DNA MER2_type 2272 2487 0 460 165 66 0 chr5 41925471 41925562 -161159970 + MIR SINE MIR 156 252 -10 1355 221 0 34 chr5 41925785 41926107 -161159425 - AluJo SINE Alu -1 311 1 301 145 32 0 chr5 41926130 41926192 -161159340 - L1ME4a LINE L1 -8 6113 6050 1421 106 60 0 chr5 41926372 41926589 -161158943 - MER30 DNA MER1_type 0 230 1 26 0 0 0 chr5 41926633 41926659 -161158873 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 41930207 41930230 -161155302 + AT_rich Low_complexity Low_complexity 1 23 0 835 241 68 14 chr5 41930336 41930543 -161154989 - MER20 DNA MER1_type 0 219 2 2267 77 27 0 chr5 41931706 41932003 -161153529 - AluSg SINE Alu -5 305 1 253 347 63 50 chr5 41932054 41932260 -161153272 + MIR SINE MIR 23 232 -30 850 199 13 0 chr5 41932262 41932413 -161153119 + MER46A DNA MER2_type 1 153 -83 25 31 0 0 chr5 41932637 41932669 -161152863 + AT_rich Low_complexity Low_complexity 1 32 0 1559 195 7 3 chr5 41932674 41932956 -161152576 + AluJb SINE Alu 4 286 -26 233 265 0 20 chr5 41933421 41933523 -161152009 - L1M LINE L1 -2380 5428 5329 1246 136 5 0 chr5 41933537 41933728 -161151804 - AluJb SINE Alu -1 311 120 6284 53 10 82 chr5 41933859 41935654 -161149878 - SVA Other Other -683 1386 1 215 294 0 0 chr5 41936271 41936322 -161149210 + MIR3 SINE MIR 107 157 -51 2273 93 0 7 chr5 41936520 41936821 -161148711 - AluSp SINE Alu -14 299 1 2071 120 10 3 chr5 41936850 41937142 -161148390 + AluSg SINE Alu 1 294 -16 22 35 0 0 chr5 41938299 41938328 -161147204 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr5 41938814 41938859 -161146673 + AT_rich Low_complexity Low_complexity 1 45 0 1016 189 6 108 chr5 41939171 41939422 -161146110 - L1MD3 LINE L1 0 8038 7849 547 168 112 148 chr5 41939422 41939618 -161145914 + MER5A DNA MER1_type 1 189 0 1016 189 6 108 chr5 41939618 41939720 -161145812 - L1MD3 LINE L1 -189 7849 7738 1203 224 47 4 chr5 41939742 41939997 -161145535 - L1MC4 LINE L1 -1014 7028 6763 1936 126 60 0 chr5 41940236 41940521 -161145011 + AluSx SINE Alu 1 302 -10 26 30 0 0 chr5 41941150 41941183 -161144349 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 41941283 41941304 -161144228 + AT_rich Low_complexity Low_complexity 1 21 0 2352 94 0 0 chr5 41942415 41942713 -161142819 + AluSq SINE Alu 1 298 -15 2010 95 4 0 chr5 41942825 41943089 -161142443 + AluY SINE Alu 27 291 -20 21 57 0 0 chr5 41943388 41943423 -161142109 + AT_rich Low_complexity Low_complexity 1 35 0 203 133 0 0 chr5 41944109 41944139 -161141393 + (TATG)n Simple_repeat Simple_repeat 3 32 0 444 289 132 56 chr5 41944860 41945282 -161140250 - L1MC5 LINE L1 -151 7810 7345 2124 121 3 3 chr5 41945282 41945580 -161139952 + AluSq SINE Alu 1 298 -15 444 289 132 56 chr5 41945580 41945642 -161139890 - L1MC5 LINE L1 -616 7345 7289 212 266 31 0 chr5 41945661 41945725 -161139807 - MIR SINE MIR -22 240 175 1474 190 7 69 chr5 41946350 41946655 -161138877 + AluJo SINE Alu 3 288 -24 22 80 0 0 chr5 41946730 41946780 -161138752 + AT_rich Low_complexity Low_complexity 1 50 0 2223 164 26 7 chr5 41946787 41947215 -161138317 + L1MA4 LINE L1 5864 6299 -1 21 57 0 0 chr5 41947242 41947277 -161138255 + AT_rich Low_complexity Low_complexity 1 35 0 766 200 28 56 chr5 41948148 41948328 -161137204 + FAM SINE Alu 1 175 0 2311 96 0 25 chr5 41949003 41949317 -161136215 - AluSx SINE Alu -6 306 1 797 201 137 97 chr5 41949618 41949732 -161135800 - L1MC5 LINE L1 -99 7862 7754 2251 104 3 13 chr5 41949732 41950040 -161135492 - AluSx SINE Alu -7 305 1 797 201 137 97 chr5 41950040 41950555 -161134977 - L1MC5 LINE L1 -207 7754 7238 * 2225 207 108 16 chr5 41950549 41951162 -161134370 - L1ME1 LINE L1 -58 6108 5440 1101 197 0 24 chr5 41952161 41952374 -161133158 - AluJb SINE Alu -18 294 87 2337 86 0 7 chr5 41952385 41952686 -161132846 - AluSq SINE Alu -14 299 1 1247 239 20 7 chr5 41953099 41953404 -161132128 + L1ME2 LINE L1 5745 6053 -111 377 260 75 34 chr5 41953404 41953550 -161131982 - MER5A DNA MER1_type -1 188 37 * 753 233 0 13 chr5 41953420 41953570 -161131962 + MER5A DNA MER1_type 37 184 -5 419 216 9 17 chr5 41953570 41953686 -161131846 + L1ME2 LINE L1 6040 6154 -10 500 135 0 11 chr5 41953755 41953844 -161131688 + (TG)n Simple_repeat Simple_repeat 2 89 0 1389 233 0 17 chr5 41953882 41954170 -161131362 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr5 41954625 41954646 -161130886 + AT_rich Low_complexity Low_complexity 1 21 0 518 231 148 73 chr5 41954646 41955045 -161130487 + L1ME3A LINE L1 4632 5060 -1086 263 176 0 29 chr5 41955059 41955127 -161130405 - L1MC4 LINE L1 -1339 6703 6638 849 149 8 15 chr5 41955134 41955268 -161130264 - FLAM_A SINE Alu 0 133 1 666 272 106 56 chr5 41955331 41956072 -161129460 + L1ME3A LINE L1 5171 5950 -220 1553 161 79 0 chr5 41956409 41956676 -161128856 + AluJb SINE Alu 1 288 -24 650 223 14 47 chr5 41956892 41957103 -161128429 - MER3 DNA MER1_type -1 208 5 22 0 0 0 chr5 41957397 41957419 -161128113 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 41957570 41957615 -161127917 + AT_rich Low_complexity Low_complexity 1 45 0 318 50 0 0 chr5 41957737 41957777 -161127755 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 83 0 0 chr5 41958276 41958336 -161127196 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 41958367 41958425 -161127107 + AT_rich Low_complexity Low_complexity 1 58 0 2287 79 0 7 chr5 41958505 41958795 -161126737 + AluY SINE Alu 1 288 -23 375 98 0 0 chr5 41958795 41958856 -161126676 + (TA)n Simple_repeat Simple_repeat 1 61 0 238 286 0 0 chr5 41959026 41959096 -161126436 + T-rich Low_complexity Low_complexity 1 70 0 1825 180 3 3 chr5 41959383 41959688 -161125844 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 41960477 41960504 -161125028 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 41960681 41960745 -161124787 + AT_rich Low_complexity Low_complexity 1 64 0 407 233 133 8 chr5 41960877 41960997 -161124535 - MIR SINE MIR -30 232 98 703 279 116 0 chr5 41961321 41961536 -161123996 - MIR SINE MIR 0 262 23 350 220 85 75 chr5 41961941 41962141 -161123391 - L1ME LINE L1 -303 5818 5617 287 241 63 49 chr5 41962236 41962467 -161123065 - L1ME LINE L1 -753 5489 5255 2282 103 0 10 chr5 41962655 41962967 -161122565 - AluSg SINE Alu -1 309 1 1856 158 3 7 chr5 41962969 41963266 -161122266 - AluSx SINE Alu -16 296 1 618 35 35 0 chr5 41963556 41963643 -161121889 + AluSg SINE Alu 1 90 -220 1008 108 13 6 chr5 41963747 41963904 -161121628 + THE1C-int LTR MaLR 1423 1580 0 2134 116 42 53 chr5 41963904 41964057 -161121475 + THE1C LTR MaLR 1 154 -221 2151 120 7 0 chr5 41964057 41964356 -161121176 - AluSc SINE Alu -8 301 1 2134 116 42 53 chr5 41964356 41964581 -161120951 + THE1C LTR MaLR 154 375 0 8739 204 88 25 chr5 41964581 41964816 -161120716 + L1 LINE L1 2775 2994 -3161 2313 94 10 0 chr5 41964816 41965114 -161120418 + AluSp SINE Alu 1 301 -12 8739 204 88 25 chr5 41965114 41966371 -161119161 + L1 LINE L1 2994 4170 -1985 306 50 0 0 chr5 41966371 41966411 -161119121 + (CA)n Simple_repeat Simple_repeat 2 41 0 8739 204 88 25 chr5 41966411 41967262 -161118270 + L1 LINE L1 4170 5295 -860 2553 45 0 10 chr5 41967262 41967573 -161117959 + AluY SINE Alu 1 308 -3 8739 204 88 25 chr5 41967573 41967664 -161117868 + L1 LINE L1 5295 5379 -776 804 174 8 0 chr5 41967955 41968076 -161117456 + FLAM_C SINE Alu 3 124 -19 2200 96 0 7 chr5 41968081 41968374 -161117158 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 41968374 41968402 -161117130 + AT_rich Low_complexity Low_complexity 1 28 0 6126 86 26 8 chr5 41969523 41970501 -161115031 - L1PB1 LINE L1 -7 6144 5150 1685 151 13 7 chr5 41970604 41970902 -161114630 + AluSx SINE Alu 1 300 -12 186 279 82 33 chr5 41971489 41971550 -161113982 - MIR SINE MIR -152 110 47 2166 115 10 3 chr5 41971573 41971878 -161113654 - AluSc SINE Alu -2 307 1 1576 165 0 84 chr5 41971990 41972191 -161113341 + AluJb SINE Alu 1 167 -145 2107 145 0 3 chr5 41972191 41972501 -161113031 + AluSx SINE Alu 3 311 -1 1576 165 0 84 chr5 41972501 41972621 -161112911 + AluJb SINE Alu 167 295 -17 1642 144 26 46 chr5 41974102 41974408 -161111124 + AluJo SINE Alu 1 300 -12 666 220 43 0 chr5 41974519 41974660 -161110872 + MIR SINE MIR 29 175 -87 2327 86 0 13 chr5 41974703 41975007 -161110525 - AluSc SINE Alu -9 300 1 2261 95 3 16 chr5 41975384 41975690 -161109842 + AluSp SINE Alu 1 302 -11 2445 69 0 7 chr5 41975699 41976003 -161109529 + AluY SINE Alu 1 302 -9 814 207 12 6 chr5 41976419 41976588 -161108944 + FAM SINE Alu 1 170 -5 1368 65 0 6 chr5 41977877 41978046 -161107486 - AluSq SINE Alu -15 298 131 573 103 4 1 chr5 41978667 41978901 -161106631 + AluSx SINE Alu 41 307 -5 1263 192 92 37 chr5 41979550 41979821 -161105711 - AluJo SINE Alu -16 286 1 315 141 0 0 chr5 41979922 41979986 -161105546 + (CA)n Simple_repeat Simple_repeat 2 65 0 1506 175 4 18 chr5 41980520 41980800 -161104732 - AluJo SINE Alu -1 311 36 698 87 10 0 chr5 41981762 41981865 -161103667 - L1MA2 LINE L1 0 6304 6201 1054 290 53 35 chr5 41981916 41981937 -161103595 + LTR16B LTR ERVL 23 42 -422 1695 169 17 14 chr5 41981937 41982233 -161103299 + AluJb SINE Alu 1 297 -15 1054 290 53 35 chr5 41982233 41982645 -161102887 + LTR16B LTR ERVL 42 464 0 570 222 86 0 chr5 41982697 41982814 -161102718 + FLAM_A SINE Alu 1 127 -6 1806 205 116 0 chr5 41982911 41983272 -161102260 + MER68 LTR ERV1 160 562 0 321 248 81 60 chr5 41983272 41983417 -161102115 + LTR16B LTR ERVL 317 464 0 2378 90 10 6 chr5 41983485 41983797 -161101735 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 41983810 41983834 -161101698 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1188 182 5 5 chr5 41983841 41984044 -161101488 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 41984094 41984130 -161101402 + AT_rich Low_complexity Low_complexity 1 36 0 317 120 0 0 chr5 41984147 41984197 -161101335 - AluJo SINE Alu -161 141 92 739 199 150 34 chr5 41984440 41984560 -161100972 + L1P LINE L1 4467 4572 -1574 1899 129 44 7 chr5 41984560 41984855 -161100677 + AluSq SINE Alu 5 310 -3 739 199 150 34 chr5 41984855 41985001 -161100531 + L1P LINE L1 4572 4764 -1382 9729 105 47 4 chr5 41985103 41986501 -161099031 - THE1C-int LTR MaLR -123 1457 1 2501 114 8 16 chr5 41986501 41986879 -161098653 - THE1C LTR MaLR 0 375 1 1795 243 19 4 chr5 41986902 41987363 -161098169 - L1 LINE L1 -3380 2766 2299 23 33 0 0 chr5 41988348 41988378 -161097154 + AT_rich Low_complexity Low_complexity 1 30 0 1682 179 11 0 chr5 41988540 41988825 -161096707 - AluJo SINE Alu -24 288 1 1005 97 21 0 chr5 41989792 41989937 -161095595 - MER30 DNA MER1_type -74 156 9 2218 107 0 0 chr5 41990425 41990715 -161094817 + AluSg SINE Alu 1 290 -20 1523 139 35 116 chr5 41990780 41991125 -161094407 + AluYb8 SINE Alu 1 317 -1 288 77 0 0 chr5 41991157 41991196 -161094336 + (CA)n Simple_repeat Simple_repeat 2 40 0 1569 193 14 7 chr5 41991386 41991520 -161094012 + AluJo SINE Alu 1 133 -179 2233 102 0 7 chr5 41991520 41991824 -161093708 + AluSg1 SINE Alu 1 302 -7 1569 193 14 7 chr5 41991824 41991969 -161093563 + AluJo SINE Alu 133 282 -30 1131 150 55 59 chr5 41992039 41992259 -161093273 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 41992809 41992830 -161092702 + AT_rich Low_complexity Low_complexity 1 21 0 2237 92 7 7 chr5 41993341 41993633 -161091899 + AluSx SINE Alu 1 292 -20 306 289 0 13 chr5 41993997 41994073 -161091459 + MER5C DNA MER1_type 1 75 -249 382 286 49 2 chr5 41994592 41994725 -161090807 + MIR SINE MIR 17 154 -63 2010 135 55 0 chr5 41995182 41995508 -161090024 - MER2 DNA MER2_type 0 344 1 209 213 0 21 chr5 41995991 41996038 -161089494 + MIR SINE MIR 81 126 -136 30 0 0 0 chr5 41996250 41996280 -161089252 + AT_rich Low_complexity Low_complexity 1 30 0 826 225 14 38 chr5 41996317 41996526 -161089006 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 41996688 41996747 -161088785 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 41997212 41997251 -161088281 + (CA)n Simple_repeat Simple_repeat 2 40 0 214 286 0 48 chr5 41997973 41998057 -161087475 + MIR SINE MIR 119 198 -64 2060 117 3 51 chr5 41998454 41998770 -161086762 + AluSx SINE Alu 1 301 -11 1065 252 25 6 chr5 41998775 41999096 -161086436 - L1MC4 LINE L1 -27 8015 7689 1876 162 10 3 chr5 41999097 41999394 -161086138 - AluSx SINE Alu -9 303 5 523 204 142 37 chr5 42000365 42000527 -161085005 + MIR3 SINE MIR 29 207 -1 1641 149 33 33 chr5 42001275 42001360 -161084172 - MER44D DNA MER2_type -1883 608 524 1951 134 84 0 chr5 42001360 42001681 -161083851 - MER7A DNA MER2_type 0 346 1 1641 149 33 33 chr5 42001681 42001931 -161083601 - MER44D DNA MER2_type -1966 525 3 388 283 25 50 chr5 42002028 42002148 -161083384 - L2 LINE L2 0 3272 3156 2506 84 0 0 chr5 42002187 42002497 -161083035 + AluSg SINE Alu 1 310 0 2104 128 3 10 chr5 42003338 42003650 -161081882 + AluSx SINE Alu 1 310 -2 182 280 56 65 chr5 42003683 42003790 -161081742 - L2 LINE L2 -813 2501 2396 1084 185 43 56 chr5 42004006 42004238 -161081294 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 42004253 42004339 -161081193 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 42005242 42005352 -161080180 + CT-rich Low_complexity Low_complexity 2 111 0 214 318 0 0 chr5 42006150 42006194 -161079338 + L2 LINE L2 3210 3253 -19 468 271 159 0 chr5 42006357 42006508 -161079024 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 42006974 42006996 -161078536 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 42007497 42007785 -161077747 + AluSx SINE Alu 1 288 -24 266 210 16 0 chr5 42007855 42007917 -161077615 - L1ME LINE L1 -338 5828 5766 291 234 25 120 chr5 42008369 42008463 -161077069 - Charlie8 DNA MER1_type -2224 193 118 1475 176 62 18 chr5 42008463 42008736 -161076796 - AluJo SINE Alu -27 285 1 291 234 25 120 chr5 42008736 42008799 -161076733 - Charlie8 DNA MER1_type -2299 118 51 305 279 24 67 chr5 42008800 42008965 -161076567 - L2 LINE L2 -546 2768 2611 452 198 10 10 chr5 42009571 42009667 -161075865 + MER2 DNA MER2_type 2 97 -248 1264 159 0 5 chr5 42009668 42009869 -161075663 + AluJb SINE Alu 1 200 -112 852 186 0 7 chr5 42009970 42010115 -161075417 + AluSg/x SINE Alu 146 289 -21 818 194 63 40 chr5 42010122 42010281 -161075251 + MER2 DNA MER2_type 81 250 -95 2312 69 21 3 chr5 42010281 42010572 -161074960 - AluSq SINE Alu -17 296 1 818 194 63 40 chr5 42010572 42010665 -161074867 + MER2 DNA MER2_type 250 339 -6 705 160 76 105 chr5 42010887 42011074 -161074458 + L1MB4 LINE L1 5950 6130 -50 1860 178 0 10 chr5 42011074 42011378 -161074154 + AluJb SINE Alu 1 301 -11 705 160 76 105 chr5 42011378 42011428 -161074104 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 42011464 42011496 -161074036 + AT_rich Low_complexity Low_complexity 1 32 0 554 217 104 0 chr5 42011507 42011613 -161073919 + AluSq/x SINE Alu 4 120 -192 25 51 0 0 chr5 42011740 42011779 -161073753 + AT_rich Low_complexity Low_complexity 1 39 0 850 232 32 0 chr5 42011915 42012100 -161073432 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 42014990 42015014 -161070518 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 279 240 115 10 chr5 42015195 42015291 -161070241 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 42015543 42015841 -161069691 + AluSp SINE Alu 1 299 -14 24 53 0 0 chr5 42017134 42017172 -161068360 + AT_rich Low_complexity Low_complexity 1 38 0 325 274 52 7 chr5 42017180 42017315 -161068217 - L1MC5 LINE L1 -89 7872 7732 2481 66 10 0 chr5 42017323 42017625 -161067907 - AluY SINE Alu -6 305 1 2391 75 0 3 chr5 42017818 42018113 -161067419 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 42019056 42019159 -161066373 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 42019991 42020121 -161065411 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 42020357 42020407 -161065125 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 42020476 42020682 -161064850 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 42020777 42020820 -161064712 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 42021107 42021387 -161064145 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 42021471 42021867 -161063665 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 42022229 42022552 -161062980 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 42022674 42023118 -161062414 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 42023134 42023252 -161062280 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 42023274 42023630 -161061902 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 42023662 42023968 -161061564 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 42024400 42024722 -161060810 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 42024754 42025049 -161060483 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 42025138 42025351 -161060181 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 42025374 42025529 -161060003 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 42025819 42025995 -161059537 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 42026045 42026353 -161059179 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 42026353 42026477 -161059055 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 42026487 42027809 -161057723 - L1PA11 LINE L1 -1 6173 4836 22 56 0 0 chr5 42028365 42028401 -161057131 + AT_rich Low_complexity Low_complexity 1 36 0 427 343 42 15 chr5 42028529 42028861 -161056671 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 42029462 42029479 -161056053 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 42029479 42029605 -161055927 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 42029605 42029759 -161055773 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 42029765 42030063 -161055469 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 42030078 42030296 -161055236 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 42030299 42030549 -161054983 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 42030557 42030711 -161054821 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 42030716 42031028 -161054504 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 42031028 42031110 -161054422 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 42031111 42031293 -161054239 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 42031309 42031498 -161054034 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 42031495 42032938 -161052594 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 42032938 42033219 -161052313 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 42033219 42033438 -161052094 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 42034368 42034826 -161050706 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 42034826 42035308 -161050224 + LTR22 LTR ERVK 1 505 -4 3467 132 34 7 chr5 42035313 42035902 -161049630 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 42035903 42036194 -161049338 - AluY SINE Alu -20 291 1 16773 91 10 0 chr5 42036196 42038562 -161046970 + HERVK22 LTR ERVK 694 3081 -3756 10198 113 16 14 chr5 42038572 42040212 -161045320 + HERVK22 LTR ERVK 3205 4847 -1990 18011 86 8 12 chr5 42040314 42042867 -161042665 + HERVK22 LTR ERVK 4294 6837 0 1882 179 80 66 chr5 42042867 42043365 -161042167 + LTR22 LTR ERVK 1 505 -4 8662 193 16 3 chr5 42043370 42046103 -161039429 + L1P5 LINE L1 3051 5822 -565 251 108 0 0 chr5 42046110 42046159 -161039373 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 42046168 42046310 -161039222 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 42046335 42046393 -161039139 + L1 LINE L1 3373 3430 -3432 1629 126 105 26 chr5 42046524 42046866 -161038666 + L1M1 LINE L1 2198 2566 -4283 2922 194 16 70 chr5 42046868 42047158 -161038374 + L1M1 LINE L1 2816 3120 -3728 2345 98 0 0 chr5 42047158 42047464 -161038068 + AluSg1 SINE Alu 1 306 -3 2922 194 16 70 chr5 42047464 42048165 -161037367 + L1M1 LINE L1 3120 3912 -2936 21083 143 32 14 chr5 42048175 42051237 -161034295 - L1PA11 LINE L1 -2 6172 2989 2144 145 0 0 chr5 42051237 42051547 -161033985 - AluSx SINE Alu -2 310 1 21083 143 32 14 chr5 42051547 42053374 -161032158 - L1PA11 LINE L1 -3185 2989 1197 2042 120 0 7 chr5 42053380 42053664 -161031868 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 42053683 42053983 -161031549 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 42053995 42054079 -161031453 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 42054079 42054387 -161031145 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 42054387 42055393 -161030139 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 42055393 42055539 -161029993 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 42055643 42055883 -161029649 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 42056875 42056904 -161028628 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 216 86 0 0 chr5 42057261 42057296 -161028236 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 210 37 0 0 chr5 42057564 42057591 -161027941 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 42058495 42058722 -161026810 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 42058722 42059016 -161026516 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 42059016 42059390 -161026142 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 42059515 42059544 -161025988 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 42059677 42059726 -161025806 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 42059725 42059821 -161025711 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 42059863 42060166 -161025366 - AluY SINE Alu -8 303 1 2457 58 0 19 chr5 42060177 42060485 -161025047 - AluY SINE Alu -9 302 1 2482 103 22 6 chr5 42062202 42062560 -161022972 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 42062649 42062768 -161022764 + L1MEd LINE L1 895 1021 -5098 2224 97 0 0 chr5 42062874 42063172 -161022360 - AluSc SINE Alu 0 298 1 380 281 33 8 chr5 42063228 42063349 -161022183 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 42063369 42063452 -161022080 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 42063464 42063597 -161021935 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 42063648 42063671 -161021861 + AT_rich Low_complexity Low_complexity 1 23 0 1095 138 0 0 chr5 42063679 42063838 -161021694 + AluSq SINE Alu 1 159 -154 442 174 18 55 chr5 42064006 42064115 -161021417 + FLAM_A SINE Alu 11 115 -27 14681 38 19 23 chr5 42064363 42067022 -161018510 + L1PA5 LINE L1 3528 6153 -1 21 0 0 0 chr5 42067346 42067367 -161018165 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr5 42069460 42069494 -161016038 + (CA)n Simple_repeat Simple_repeat 1 34 0 202 227 0 0 chr5 42069687 42069731 -161015801 + (CA)n Simple_repeat Simple_repeat 1 44 0 682 220 16 32 chr5 42121816 42122002 -160963530 - MER3 DNA MER1_type -26 183 1 22 0 0 0 chr5 42122292 42122314 -160963218 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 42122465 42122510 -160963022 + AT_rich Low_complexity Low_complexity 1 45 0 336 48 0 0 chr5 42122632 42122674 -160962858 + (TA)n Simple_repeat Simple_repeat 1 42 0 25 83 0 0 chr5 42123173 42123233 -160962299 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 42123264 42123322 -160962210 + AT_rich Low_complexity Low_complexity 1 58 0 2251 84 0 3 chr5 42123402 42123689 -160961843 + AluY SINE Alu 1 286 -25 390 108 0 0 chr5 42123689 42123754 -160961778 + (TA)n Simple_repeat Simple_repeat 2 66 0 238 286 0 0 chr5 42123924 42123994 -160961538 + T-rich Low_complexity Low_complexity 1 70 0 1817 177 3 3 chr5 42124281 42124586 -160960946 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 42125371 42125398 -160960134 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 42125575 42125639 -160959893 + AT_rich Low_complexity Low_complexity 1 64 0 415 233 133 8 chr5 42125771 42125891 -160959641 - MIR SINE MIR -30 232 98 711 279 116 0 chr5 42126215 42126430 -160959102 - MIR SINE MIR 0 262 23 369 220 85 75 chr5 42126835 42127035 -160958497 - L1ME LINE L1 -303 5818 5617 292 241 63 49 chr5 42127130 42127361 -160958171 - L1ME LINE L1 -753 5489 5255 2255 103 0 10 chr5 42127549 42127861 -160957671 - AluSg SINE Alu -1 309 1 1870 158 0 7 chr5 42127863 42128161 -160957371 - AluSx SINE Alu -16 296 1 2181 107 0 0 chr5 42128450 42128740 -160956792 + AluSg SINE Alu 1 290 -20 1495 139 35 116 chr5 42128805 42129150 -160956382 + AluYb8 SINE Alu 1 317 -1 270 81 0 0 chr5 42129182 42129219 -160956313 + (CA)n Simple_repeat Simple_repeat 2 38 0 1542 193 14 7 chr5 42129409 42129543 -160955989 + AluJo SINE Alu 1 133 -179 2206 102 0 7 chr5 42129543 42129848 -160955684 + AluSg1 SINE Alu 1 303 -6 1542 193 14 7 chr5 42129848 42129993 -160955539 + AluJo SINE Alu 133 282 -30 1117 150 55 59 chr5 42130063 42130283 -160955249 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 42130833 42130854 -160954678 + AT_rich Low_complexity Low_complexity 1 21 0 2191 92 7 7 chr5 42131365 42131657 -160953875 + AluSx SINE Alu 1 292 -20 299 289 0 13 chr5 42132020 42132096 -160953436 + MER5C DNA MER1_type 1 75 -249 381 286 49 2 chr5 42132615 42132748 -160952784 + MIR SINE MIR 17 154 -63 2041 132 55 0 chr5 42133206 42133532 -160952000 - MER2 DNA MER2_type 0 344 1 193 257 29 43 chr5 42133992 42134062 -160951470 + MIR SINE MIR 58 126 -136 30 0 0 0 chr5 42134274 42134304 -160951228 + AT_rich Low_complexity Low_complexity 1 30 0 804 225 14 38 chr5 42134341 42134550 -160950982 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 42134712 42134771 -160950761 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 42135236 42135275 -160950257 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 286 0 48 chr5 42135997 42136081 -160949451 + MIR SINE MIR 119 198 -64 2014 117 3 51 chr5 42136478 42136794 -160948738 + AluSx SINE Alu 1 301 -11 1170 252 28 38 chr5 42136799 42137121 -160948411 - L1MC4 LINE L1 -27 8015 7696 1822 162 10 3 chr5 42137121 42137418 -160948114 - AluSx SINE Alu -9 303 5 1170 252 28 38 chr5 42137418 42137488 -160948044 - L1MC4 LINE L1 -346 7696 7627 527 204 142 37 chr5 42138389 42138551 -160946981 + MIR3 SINE MIR 29 207 -1 1764 149 33 33 chr5 42139299 42139384 -160946148 - MER44D DNA MER2_type -1883 608 524 1962 134 84 0 chr5 42139384 42139705 -160945827 - MER7A DNA MER2_type 0 346 1 1764 149 33 33 chr5 42139705 42139955 -160945577 - MER44D DNA MER2_type -1966 525 3 378 300 25 50 chr5 42140052 42140172 -160945360 - L2 LINE L2 0 3272 3156 2481 77 0 0 chr5 42140211 42140521 -160945011 + AluSg SINE Alu 1 310 0 2034 129 3 10 chr5 42141362 42141673 -160943859 + AluSx SINE Alu 1 309 -3 190 280 56 65 chr5 42141706 42141813 -160943719 - L2 LINE L2 -813 2501 2396 1040 185 43 56 chr5 42142029 42142261 -160943271 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 42142276 42142362 -160943170 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 42143265 42143375 -160942157 + CT-rich Low_complexity Low_complexity 2 111 0 211 318 0 0 chr5 42144173 42144217 -160941315 + L2 LINE L2 3210 3253 -19 457 271 159 0 chr5 42144380 42144531 -160941001 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 42144997 42145019 -160940513 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 42145520 42145808 -160939724 + AluSx SINE Alu 1 288 -24 288 210 16 0 chr5 42145878 42145940 -160939592 - L1ME LINE L1 -338 5828 5766 319 234 25 120 chr5 42146392 42146486 -160939046 - Charlie8 DNA MER1_type -137 193 118 1475 176 62 18 chr5 42146486 42146759 -160938773 - AluJo SINE Alu -27 285 1 319 234 25 120 chr5 42146759 42146822 -160938710 - Charlie8 DNA MER1_type -212 118 51 305 279 24 67 chr5 42146823 42146988 -160938544 - L2 LINE L2 -546 2768 2611 1175 182 46 83 chr5 42147594 42147691 -160937841 + MER2 DNA MER2_type 2 101 -244 1742 175 0 7 chr5 42147691 42147982 -160937550 + AluJb SINE Alu 1 289 -23 1175 182 46 83 chr5 42147982 42148141 -160937391 + MER2 DNA MER2_type 101 244 -101 2347 69 21 0 chr5 42148141 42148431 -160937101 - AluSq SINE Alu -17 296 1 1175 182 46 83 chr5 42148431 42148524 -160937008 + MER2 DNA MER2_type 244 339 -6 705 160 76 105 chr5 42148746 42148933 -160936599 + L1MB4 LINE L1 5950 6130 -50 1860 178 0 10 chr5 42148933 42149237 -160936295 + AluJb SINE Alu 1 301 -11 705 160 76 105 chr5 42149237 42149287 -160936245 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 42149323 42149355 -160936177 + AT_rich Low_complexity Low_complexity 1 32 0 554 217 104 0 chr5 42149366 42149472 -160936060 + AluSq/x SINE Alu 4 120 -193 25 51 0 0 chr5 42149599 42149638 -160935894 + AT_rich Low_complexity Low_complexity 1 39 0 850 232 32 0 chr5 42149774 42149959 -160935573 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 42152848 42152872 -160932660 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 312 237 103 10 chr5 42153053 42153150 -160932382 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 42153402 42153700 -160931832 + AluSp SINE Alu 1 299 -14 310 281 52 7 chr5 42155039 42155174 -160930358 - L1MC5 LINE L1 -89 7872 7732 2490 66 10 0 chr5 42155181 42155484 -160930048 - AluY SINE Alu -5 306 1 2383 75 3 0 chr5 42155677 42155970 -160929562 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 42156913 42157016 -160928516 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 42157848 42157978 -160927554 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 42158214 42158264 -160927268 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 42158333 42158539 -160926993 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 42158634 42158677 -160926855 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 42158964 42159244 -160926288 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 42159328 42159724 -160925808 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 42160086 42160409 -160925123 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 42160531 42160975 -160924557 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 42160991 42161109 -160924423 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 42161131 42161487 -160924045 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 42161519 42161825 -160923707 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 42162257 42162579 -160922953 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 42162611 42162906 -160922626 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 42162995 42163208 -160922324 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 42163231 42163386 -160922146 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 42163676 42163852 -160921680 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 42163902 42164210 -160921322 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 42164210 42164334 -160921198 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 42164344 42165666 -160919866 - L1PA11 LINE L1 -1 6173 4836 21 57 0 0 chr5 42166222 42166257 -160919275 + AT_rich Low_complexity Low_complexity 1 35 0 427 343 42 15 chr5 42166385 42166717 -160918815 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 42167317 42167334 -160918198 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 42167334 42167460 -160918072 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 42167460 42167614 -160917918 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 42167620 42167918 -160917614 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 42167933 42168151 -160917381 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 42168154 42168404 -160917128 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 42168412 42168566 -160916966 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 42168571 42168883 -160916649 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 42168883 42168965 -160916567 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 42168966 42169148 -160916384 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 42169164 42169353 -160916179 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 42169350 42170793 -160914739 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 42170793 42171074 -160914458 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 42171074 42171293 -160914239 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 42172223 42172681 -160912851 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 42172681 42173163 -160912369 + LTR22 LTR ERVK 1 505 -4 3622 132 29 5 chr5 42173168 42173759 -160911773 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 42173760 42174051 -160911481 - AluY SINE Alu -20 291 1 16812 91 9 0 chr5 42174053 42176420 -160909112 + HERVK22 LTR ERVK 694 3081 -3756 25120 97 8 8 chr5 42176430 42180061 -160905471 + HERVK22 LTR ERVK 3205 6837 0 1882 179 80 66 chr5 42180061 42180559 -160904973 + LTR22 LTR ERVK 1 505 -4 10307 196 17 2 chr5 42180564 42183297 -160902235 + L1P5 LINE L1 3051 5822 -565 237 132 0 0 chr5 42183304 42183353 -160902179 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 42183362 42183504 -160902028 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 42183529 42183587 -160901945 + L1 LINE L1 3373 3430 -3432 2399 146 72 16 chr5 42183627 42184115 -160901417 + L1M1 LINE L1 2052 2566 -4283 2928 194 16 69 chr5 42184117 42184407 -160901125 + L1M1 LINE L1 2816 3120 -3728 2387 92 0 0 chr5 42184407 42184711 -160900821 + AluSg1 SINE Alu 1 304 -5 2928 194 16 69 chr5 42184711 42185411 -160900121 + L1M1 LINE L1 3120 3912 -2936 21131 144 32 12 chr5 42185421 42188473 -160897059 - L1PA11 LINE L1 -2 6172 2985 2144 145 0 0 chr5 42188473 42188783 -160896749 - AluSx SINE Alu -2 310 1 21131 144 32 12 chr5 42188783 42190610 -160894922 - L1PA11 LINE L1 -3189 2985 1197 2042 120 0 7 chr5 42190616 42190900 -160894632 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 42190919 42191219 -160894313 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 42191231 42191315 -160894217 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 42191315 42191623 -160893909 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 42191623 42192629 -160892903 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 42192629 42192775 -160892757 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 42192879 42193119 -160892413 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 42194111 42194140 -160891392 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 254 50 25 0 chr5 42194492 42194532 -160891000 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 210 37 0 0 chr5 42194800 42194827 -160890705 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 42195731 42195958 -160889574 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 42195958 42196252 -160889280 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 42196252 42196626 -160888906 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 42196751 42196780 -160888752 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 42196913 42196962 -160888570 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 42196961 42197057 -160888475 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 42197099 42197402 -160888130 - AluY SINE Alu -8 303 1 2445 62 0 19 chr5 42197413 42197721 -160887811 - AluY SINE Alu -9 302 1 2506 101 22 6 chr5 42199436 42199794 -160885738 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 42199883 42200002 -160885530 + L1MEd LINE L1 895 1021 -5098 2224 97 0 0 chr5 42200108 42200406 -160885126 - AluSc SINE Alu 0 298 1 380 281 33 8 chr5 42200462 42200583 -160884949 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 42200603 42200686 -160884846 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 42200698 42200831 -160884701 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 42200882 42200905 -160884627 + AT_rich Low_complexity Low_complexity 1 23 0 2181 117 3 0 chr5 42200913 42201213 -160884319 + AluSx SINE Alu 1 301 -11 186 279 82 33 chr5 42201800 42201861 -160883671 - MIR SINE MIR -152 110 47 2209 112 10 3 chr5 42201884 42202188 -160883344 - AluSc SINE Alu -3 306 1 1700 167 0 69 chr5 42202300 42202500 -160883032 + AluJb SINE Alu 1 173 -139 2169 138 0 3 chr5 42202500 42202811 -160882721 + AluSx SINE Alu 3 312 0 1700 167 0 69 chr5 42202811 42202927 -160882605 + AluJb SINE Alu 173 295 -17 1659 144 26 46 chr5 42204408 42204713 -160880819 + AluJo SINE Alu 1 299 -13 671 220 43 0 chr5 42204824 42204965 -160880567 + MIR SINE MIR 29 175 -87 2467 74 0 0 chr5 42205008 42205307 -160880225 - AluSc SINE Alu -10 299 1 2289 95 3 16 chr5 42205684 42205990 -160879542 + AluSp SINE Alu 1 302 -11 2452 69 0 7 chr5 42205999 42206303 -160879229 + AluY SINE Alu 1 302 -9 823 207 12 6 chr5 42206719 42206888 -160878644 + FAM SINE Alu 1 170 -5 1371 65 0 6 chr5 42208177 42208346 -160877186 - AluSq SINE Alu -15 298 131 575 103 4 1 chr5 42208967 42209201 -160876331 + AluSx SINE Alu 41 304 -5 1293 188 92 37 chr5 42209850 42210121 -160875411 - AluJo SINE Alu -26 286 1 333 136 0 0 chr5 42210222 42210288 -160875244 + (CA)n Simple_repeat Simple_repeat 2 67 0 1541 175 4 18 chr5 42210822 42211102 -160874430 - AluJo SINE Alu -1 311 36 691 87 10 0 chr5 42212064 42212167 -160873365 - L1MA2 LINE L1 0 6304 6201 1718 169 17 14 chr5 42212239 42212535 -160872997 + AluJb SINE Alu 1 297 -15 911 288 48 31 chr5 42212555 42212947 -160872585 + LTR16B LTR ERVL 66 464 0 576 222 86 0 chr5 42212999 42213116 -160872416 + FLAM_A SINE Alu 1 127 -6 1678 205 116 0 chr5 42213213 42213574 -160871958 + MER68 LTR ERV1 160 562 0 295 255 74 54 chr5 42213574 42213719 -160871813 + LTR16B LTR ERVL 317 464 0 2419 87 10 6 chr5 42213787 42214099 -160871433 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 42214112 42214136 -160871396 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1221 182 5 5 chr5 42214143 42214346 -160871186 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 42214396 42214432 -160871100 + AT_rich Low_complexity Low_complexity 1 36 0 321 100 0 0 chr5 42214449 42214499 -160871033 - AluJo SINE Alu -161 141 92 5845 127 37 9 chr5 42214744 42214862 -160870670 + L1PB1 LINE L1 4469 4582 -1569 1983 124 40 7 chr5 42214862 42215160 -160870372 + AluSx SINE Alu 5 312 0 5845 127 37 9 chr5 42215160 42216671 -160868861 + L1PB1 LINE L1 4582 6144 -7 21 36 0 0 chr5 42217792 42217820 -160867712 + AT_rich Low_complexity Low_complexity 1 28 0 2218 92 7 3 chr5 42217820 42218113 -160867419 - AluSq SINE Alu -19 294 1 821 179 8 0 chr5 42218118 42218241 -160867291 - FLAM_C SINE Alu -19 124 1 9563 210 77 27 chr5 42218530 42218621 -160866911 - L1P LINE L1 -776 5379 5294 2535 48 0 10 chr5 42218621 42218930 -160866602 - AluY SINE Alu -5 306 1 9563 210 77 27 chr5 42218930 42219781 -160865751 - L1P LINE L1 -861 5294 4486 306 50 0 0 chr5 42219781 42219821 -160865711 + (TG)n Simple_repeat Simple_repeat 2 41 0 9563 210 77 27 chr5 42219821 42221078 -160864454 - L1P LINE L1 -1669 4486 3292 2340 94 10 0 chr5 42221078 42221376 -160864156 - AluSp SINE Alu -12 301 1 9563 210 77 27 chr5 42221376 42221611 -160863921 - L1P LINE L1 -2863 3292 3070 2132 116 42 53 chr5 42221611 42221836 -160863696 - THE1C LTR MaLR 0 375 154 2201 117 7 0 chr5 42221836 42222135 -160863397 + AluSc SINE Alu 1 301 -8 2132 116 42 53 chr5 42222135 42222288 -160863244 - THE1C LTR MaLR -221 154 1 10471 104 44 5 chr5 42222288 42223808 -160861724 - THE1C-int LTR MaLR 0 1580 1 2482 116 8 16 chr5 42223808 42224186 -160861346 - THE1C LTR MaLR 0 375 1 9563 210 77 27 chr5 42224186 42224670 -160860862 - L1P LINE L1 -3084 3071 2299 24 32 0 0 chr5 42225655 42225686 -160859846 + AT_rich Low_complexity Low_complexity 1 31 0 1703 179 11 0 chr5 42225848 42226133 -160859399 - AluJo SINE Alu -24 288 1 972 55 34 20 chr5 42227100 42227246 -160858286 - MER30 DNA MER1_type -74 156 9 186 218 195 11 chr5 42227679 42227766 -160857766 - MIR SINE MIR -46 216 114 538 251 82 27 chr5 42228097 42228256 -160857276 + MIR SINE MIR 98 262 0 617 355 98 28 chr5 42228995 42229608 -160855924 + L1MEd LINE L1 132 845 -5360 621 263 39 42 chr5 42229744 42229935 -160855597 + L1MEd LINE L1 981 1172 -5033 2170 123 0 3 chr5 42229935 42230236 -160855296 + AluSp SINE Alu 1 300 -13 621 263 39 42 chr5 42230236 42230356 -160855176 + L1MEd LINE L1 1172 1291 -4914 2141 105 34 0 chr5 42230411 42230706 -160854826 + AluY SINE Alu 1 305 -6 2471 67 0 0 chr5 42230853 42231152 -160854380 + AluY SINE Alu 1 299 -12 2188 109 0 13 chr5 42231307 42231611 -160853921 + AluSc SINE Alu 1 300 -9 1181 131 0 0 chr5 42231715 42231875 -160853657 - FAM SINE Alu -12 163 4 502 303 113 40 chr5 42231902 42232229 -160853303 + L1MEd LINE L1 2043 2393 -4003 1406 211 40 59 chr5 42232231 42232467 -160853065 + L1MC5 LINE L1 7345 7584 -377 2382 89 0 0 chr5 42232467 42232760 -160852772 - AluSg SINE Alu -17 293 1 1406 211 40 59 chr5 42232760 42233120 -160852412 + L1MC5 LINE L1 7584 7930 -31 417 303 46 16 chr5 42233139 42233631 -160851901 + L1MEd LINE L1 2387 2899 -3316 243 0 0 0 chr5 42234255 42234282 -160851250 + (A)n Simple_repeat Simple_repeat 1 27 0 313 242 217 32 chr5 42234775 42234932 -160850600 - MIR3 SINE MIR -10 198 13 2079 130 0 0 chr5 42235053 42235338 -160850194 + AluSx SINE Alu 2 286 -26 1549 135 93 32 chr5 42235434 42235514 -160850018 - MER44D DNA MER2_type -1890 601 527 1698 147 74 21 chr5 42235514 42235840 -160849692 + MER2 DNA MER2_type 2 344 0 1549 135 93 32 chr5 42235840 42236071 -160849461 - MER44D DNA MER2_type -1964 527 1 211 171 0 0 chr5 42236229 42236264 -160849268 - L2 LINE L2 -7 3306 3272 244 298 127 53 chr5 42236485 42236795 -160848737 + L2 LINE L2 2048 2403 -911 216 97 0 0 chr5 42236795 42236826 -160848706 + (CA)n Simple_repeat Simple_repeat 2 32 0 244 298 127 53 chr5 42236826 42236965 -160848567 + L2 LINE L2 2403 2530 -784 633 235 12 47 chr5 42237051 42237221 -160848311 + MER5A DNA MER1_type 26 189 0 227 282 202 27 chr5 42237230 42237418 -160848114 + L2 LINE L2 2633 2853 -461 452 322 29 12 chr5 42237665 42237836 -160847696 + L2 LINE L2 3140 3313 0 904 120 0 0 chr5 42238050 42238175 -160847357 + AluJb SINE Alu 1 125 -187 1383 178 13 9 chr5 42238463 42238694 -160846838 - AluJo SINE Alu -17 295 64 25 31 0 0 chr5 42238837 42238869 -160846663 + AT_rich Low_complexity Low_complexity 1 32 0 1534 221 10 10 chr5 42238895 42239202 -160846330 + AluJo SINE Alu 6 312 0 671 216 16 46 chr5 42239459 42239653 -160845879 + L1MEd LINE L1 3523 3710 -2505 1216 159 24 0 chr5 42239699 42239907 -160845625 + MER20 DNA MER1_type 6 218 -1 681 295 216 30 chr5 42240680 42240752 -160844780 + L2 LINE L2 1917 1974 -1340 879 130 15 0 chr5 42240752 42240883 -160844649 - FLAM_C SINE Alu 0 133 1 681 295 216 30 chr5 42240883 42241600 -160843932 + L2 LINE L2 1974 2853 -461 1950 167 0 0 chr5 42241658 42241958 -160843574 - AluJo SINE Alu -12 300 1 232 192 110 41 chr5 42242076 42242149 -160843383 - MIR SINE MIR -138 124 47 1922 172 0 3 chr5 42242605 42242895 -160842637 + AluJo SINE Alu 1 289 -23 31 26 0 0 chr5 42242905 42242943 -160842589 + AT_rich Low_complexity Low_complexity 1 38 0 1323 154 14 0 chr5 42243016 42243237 -160842295 + L1PA16 LINE L1 5940 6163 -3 234 0 0 0 chr5 42244216 42244242 -160841290 + (A)n Simple_repeat Simple_repeat 1 26 0 346 138 0 85 chr5 42245048 42245074 -160840458 - L1MB7 LINE L1 -11 6173 6146 2304 85 17 3 chr5 42245074 42245367 -160840165 - AluY SINE Alu -14 297 1 346 138 0 85 chr5 42245367 42245378 -160840154 - L1MB7 LINE L1 -38 6146 6136 2927 6 0 0 chr5 42245378 42245694 -160839838 - AluYb8 SINE Alu -2 316 1 346 138 0 85 chr5 42245694 42245749 -160839783 - L1MB7 LINE L1 -48 6136 6088 33 43 0 0 chr5 42246370 42246417 -160839115 + AT_rich Low_complexity Low_complexity 1 47 0 1887 133 0 40 chr5 42246564 42246864 -160838668 + AluSx SINE Alu 9 296 -16 253 187 55 33 chr5 42246912 42246955 -160838577 + L1ME4a LINE L1 5389 5430 -2378 2565 60 0 0 chr5 42246955 42247254 -160838278 - AluY SINE Alu -12 299 1 253 187 55 33 chr5 42247254 42247301 -160838231 + L1ME4a LINE L1 5430 5481 -2327 257 254 118 0 chr5 42248022 42248132 -160837400 + L1ME4a LINE L1 5968 6090 -31 2301 95 0 0 chr5 42248968 42249263 -160836269 - AluSx SINE Alu -17 295 1 292 350 25 61 chr5 42249326 42249523 -160836009 - L2 LINE L2 -496 2818 2629 1283 232 87 100 chr5 42249863 42250474 -160835058 + MER21B LTR ERV1 1 603 -260 1696 190 3 7 chr5 42251106 42251396 -160834136 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr5 42251396 42251422 -160834110 + AT_rich Low_complexity Low_complexity 1 26 0 1863 146 18 26 chr5 42252673 42253015 -160832517 + MER44D DNA MER2_type 1 609 0 22 35 0 0 chr5 42253880 42253909 -160831623 + AT_rich Low_complexity Low_complexity 1 29 0 815 137 0 72 chr5 42254354 42254493 -160831039 - FLAM_C SINE Alu -14 129 1 373 262 52 86 chr5 42256695 42256962 -160828570 + L1ME4a LINE L1 5863 6120 -1 1914 109 12 0 chr5 42257118 42257375 -160828157 + AluSg SINE Alu 38 297 -13 2159 72 48 0 chr5 42257413 42257703 -160827829 + AluY SINE Alu 1 304 -7 205 290 81 0 chr5 42257728 42257790 -160827742 + MIR3 SINE MIR 119 185 -23 338 255 103 48 chr5 42257842 42257987 -160827545 - MIR SINE MIR 0 262 110 28 0 0 0 chr5 42258013 42258041 -160827491 + AT_rich Low_complexity Low_complexity 1 28 0 2259 79 7 3 chr5 42258047 42258338 -160827194 + AluSq SINE Alu 14 305 -8 21 36 0 0 chr5 42258347 42258375 -160827157 + AT_rich Low_complexity Low_complexity 1 28 0 202 348 33 33 chr5 42258376 42258468 -160827064 - MIR3 SINE MIR -103 105 14 398 79 13 13 chr5 42258488 42258564 -160826968 + L1MA4A LINE L1 6225 6300 -3 271 260 41 0 chr5 42260491 42260564 -160824968 + L2 LINE L2 3238 3313 0 265 177 151 4 chr5 42260792 42260865 -160824667 + FRAM/FAM SINE Alu 16 65 -101 429 92 79 0 chr5 42260865 42260941 -160824591 + AluS SINE Alu 1 82 -231 203 358 6 12 chr5 42261073 42261246 -160824286 + CT-rich Low_complexity Low_complexity 1 172 0 462 186 0 0 chr5 42262081 42262167 -160823365 - L1ME3A LINE L1 -10 6160 6075 603 168 8 40 chr5 42262408 42262533 -160822999 - FLAM_A SINE Alu 0 142 22 2014 85 38 24 chr5 42262907 42263200 -160822332 + AluY SINE Alu 1 297 -14 1299 171 21 39 chr5 42263480 42263766 -160821766 - AluJo SINE Alu -30 282 2 1037 143 6 12 chr5 42264623 42264784 -160820748 + AluJb SINE Alu 1 160 -152 183 156 0 0 chr5 42264809 42264841 -160820691 + A-rich Low_complexity Low_complexity 1 32 0 2387 85 0 0 chr5 42265032 42265327 -160820205 - AluY SINE Alu -16 295 1 1662 129 19 15 chr5 42266330 42266594 -160818938 + AluSx SINE Alu 48 312 0 1617 143 61 54 chr5 42266612 42266906 -160818626 + AluJo SINE Alu 5 300 -12 1823 162 7 23 chr5 42267032 42267335 -160818197 - AluJo SINE Alu -14 298 1 13591 66 10 27 chr5 42268529 42270500 -160815032 + HERVL LTR ERVL 2085 4021 -1633 2231 79 0 0 chr5 42270503 42270782 -160814750 - AluSx SINE Alu -17 295 17 1574 111 9 0 chr5 42270883 42271099 -160814433 - AluSx SINE Alu -94 218 1 404 95 32 0 chr5 42271099 42271162 -160814370 + MSTB1 LTR MaLR 364 428 -4 2088 145 0 19 chr5 42271552 42271870 -160813662 - AluJb SINE Alu 0 312 1 1887 165 3 19 chr5 42272370 42272686 -160812846 + AluJb SINE Alu 2 312 0 2014 127 0 36 chr5 42272686 42272994 -160812538 + AluSx SINE Alu 1 297 -15 1605 186 14 11 chr5 42272994 42273273 -160812259 - AluJo SINE Alu -31 281 1 2305 77 0 14 chr5 42273308 42273605 -160811927 - AluY SINE Alu -18 293 1 2782 139 58 36 chr5 42273605 42274208 -160811324 - L1PB4 LINE L1 -28 6128 5513 305 259 138 9 chr5 42274377 42274493 -160811039 - L1ME3A LINE L1 -2059 5749 5619 845 161 10 120 chr5 42274500 42274539 -160810993 - AluJo SINE Alu -139 173 131 2403 97 0 0 chr5 42274539 42274839 -160810693 - AluSg SINE Alu -10 300 1 845 161 10 120 chr5 42274839 42274991 -160810541 - AluJo SINE Alu -181 131 3 2313 104 0 7 chr5 42275113 42275421 -160810111 - AluSq SINE Alu -7 306 1 2978 167 35 7 chr5 42275482 42276022 -160809510 - MER68 LTR ERV1 -7 555 1 21 0 0 0 chr5 42276049 42276070 -160809462 + AT_rich Low_complexity Low_complexity 1 21 0 2301 93 3 10 chr5 42276082 42276392 -160809140 - AluSq SINE Alu -5 308 1 2208 92 0 3 chr5 42276445 42276763 -160808769 - AluSx SINE Alu 0 317 1 290 300 58 8 chr5 42277117 42277237 -160808295 - L2 LINE L2 -1 3312 3187 1911 124 3 18 chr5 42277645 42277928 -160807604 - AluJb SINE Alu -33 279 1 1914 164 0 16 chr5 42278057 42278369 -160807163 + AluSx SINE Alu 5 311 -1 243 146 0 0 chr5 42278426 42278467 -160807065 + (A)n Simple_repeat Simple_repeat 1 41 0 1467 142 8 23 chr5 42278602 42278841 -160806691 - Tigger2 DNA MER2_type 0 2718 2482 2274 107 7 0 chr5 42278841 42279139 -160806393 + AluSp SINE Alu 1 300 -13 1467 142 8 23 chr5 42279139 42279159 -160806373 - Tigger2 DNA MER2_type -236 2482 2463 3764 167 26 23 chr5 42279223 42279702 -160805830 - Tigger2 DNA MER2_type -1974 744 261 1821 148 0 46 chr5 42279702 42280007 -160805525 - AluJb SINE Alu -21 291 1 3764 167 26 23 chr5 42280007 42280269 -160805263 - Tigger2 DNA MER2_type -2457 261 1 26 50 0 0 chr5 42280860 42280900 -160804632 + AT_rich Low_complexity Low_complexity 1 40 0 370 221 0 0 chr5 42280900 42280968 -160804564 - FLAM_A SINE Alu -8 125 58 860 105 0 0 chr5 42280968 42281082 -160804450 - AluSp/q SINE Alu -17 296 183 5044 226 41 3 chr5 42281241 42282499 -160803033 - L1M2 LINE L1 -4464 2385 1080 501 339 17 13 chr5 42282881 42283114 -160802418 - L1M2 LINE L1 -6419 430 197 1875 157 10 22 chr5 42283212 42283525 -160802007 - AluJo SINE Alu -3 309 1 2096 128 0 7 chr5 42283539 42283844 -160801688 - AluSg1 SINE Alu -6 303 1 47 0 0 0 chr5 42284270 42284317 -160801215 + AT_rich Low_complexity Low_complexity 1 47 0 198 103 0 0 chr5 42286390 42286419 -160799113 + (T)n Simple_repeat Simple_repeat 1 29 0 593 271 111 76 chr5 42286443 42286657 -160798875 - L2 LINE L2 -69 3244 3039 2294 62 0 36 chr5 42286657 42286961 -160798571 - AluY SINE Alu -18 293 1 593 271 111 76 chr5 42286961 42287112 -160798420 - L2 LINE L2 -274 3039 2895 1521 169 48 11 chr5 42287112 42287451 -160798081 + AluJb SINE Alu 1 349 0 593 271 111 76 chr5 42287451 42287606 -160797926 - L2 LINE L2 -418 2895 2696 180 300 12 100 chr5 42288416 42288496 -160797036 - L2 LINE L2 -67 3205 3133 395 184 135 80 chr5 42288609 42288772 -160796760 + MER112 DNA MER1_type 77 248 -12 834 200 130 0 chr5 42289261 42289446 -160796086 + MER3 DNA MER1_type 1 209 0 1016 168 6 0 chr5 42289479 42289640 -160795892 + AluJb SINE Alu 135 296 -16 2206 119 0 3 chr5 42290323 42290635 -160794897 - AluSx SINE Alu -1 311 1 25 0 0 0 chr5 42290746 42290771 -160794761 + AT_rich Low_complexity Low_complexity 1 25 0 258 281 16 0 chr5 42290919 42290983 -160794549 - L3 LINE CR1 -11 1566 1502 354 281 39 45 chr5 42291407 42291585 -160793947 + L1MEd LINE L1 2 178 -5941 1607 215 96 15 chr5 42291675 42291692 -160793840 + L1ME1 LINE L1 5664 5678 -488 1876 169 3 19 chr5 42291692 42291999 -160793533 + AluJb SINE Alu 1 302 -10 1607 215 96 15 chr5 42291999 42292441 -160793091 + L1ME1 LINE L1 5678 6157 -9 257 254 118 0 chr5 42293229 42293339 -160792193 - L1ME4a LINE L1 -31 6090 5968 2546 57 0 0 chr5 42294107 42294403 -160791129 + AluY SINE Alu 1 296 -15 1903 166 7 0 chr5 42294552 42294847 -160790685 + AluJo SINE Alu 1 297 -15 311 183 70 0 chr5 42295646 42295717 -160789815 + L1MC5 LINE L1 7155 7230 -731 2081 123 10 3 chr5 42295878 42296188 -160789344 + AluSx SINE Alu 1 312 0 348 240 107 53 chr5 42296232 42296382 -160789150 + L1MC5 LINE L1 7334 7491 -470 711 169 42 30 chr5 42296827 42296993 -160788539 + MLT1E2 LTR MaLR 457 624 -2 994 153 48 19 chr5 42297027 42297236 -160788296 - L1MB7 LINE L1 -19 6165 5951 22 56 0 0 chr5 42297926 42297962 -160787570 + AT_rich Low_complexity Low_complexity 1 36 0 1068 171 0 0 chr5 42298255 42298431 -160787101 + FRAM SINE Alu 1 171 -5 360 218 105 40 chr5 42298817 42298941 -160786591 + L2 LINE L2 3138 3269 -3 638 321 85 54 chr5 42299005 42299559 -160785973 + MLT1K LTR MaLR 18 588 0 1395 152 0 0 chr5 42300137 42300341 -160785191 - AluJb SINE Alu -15 297 94 1376 133 133 0 chr5 42300450 42300661 -160784871 - AluSx SINE Alu -73 239 1 499 251 59 75 chr5 42301127 42301246 -160784286 - MER112 DNA MER1_type -2 254 135 2333 111 0 3 chr5 42301246 42301553 -160783979 + AluSx SINE Alu 1 306 -6 499 251 59 75 chr5 42301553 42301688 -160783844 - MER112 DNA MER1_type -121 135 4 1431 152 20 48 chr5 42301818 42302068 -160783464 + AluJo SINE Alu 1 243 -69 4563 111 90 126 chr5 42302203 42302780 -160782752 + Tigger3b DNA MER2_type 2 598 -2430 751 156 7 30 chr5 42302780 42302915 -160782617 + AluJo SINE Alu 1 132 -170 1797 168 13 0 chr5 42302918 42303216 -160782316 + AluSx SINE Alu 1 302 -10 560 217 8 42 chr5 42303222 42303342 -160782190 + AluJo SINE Alu 141 256 -56 4563 111 90 126 chr5 42303342 42303737 -160781795 + Tigger3b DNA MER2_type 605 1064 -167 785 143 0 0 chr5 42303768 42303880 -160781652 - FAM SINE Alu -19 166 55 741 195 104 0 chr5 42303881 42304035 -160781497 + Tigger3b DNA MER2_type 1061 1230 -1 2369 65 34 0 chr5 42304112 42304405 -160781127 + AluY SINE Alu 1 303 -8 2123 89 10 17 chr5 42304416 42304707 -160780825 + AluSg SINE Alu 1 289 -21 2117 148 0 0 chr5 42304902 42305206 -160780326 + AluSx SINE Alu 1 304 -8 957 160 6 29 chr5 42305258 42305433 -160780099 - FRAM SINE Alu -5 171 1 2321 111 0 7 chr5 42305444 42305751 -160779781 - AluSg SINE Alu -5 305 1 981 157 54 0 chr5 42306188 42306354 -160779178 - FAM SINE Alu 0 175 1 1511 62 10 16 chr5 42306400 42306594 -160778938 + AluY SINE Alu 1 193 -118 2304 89 3 3 chr5 42306792 42307084 -160778448 + AluSg SINE Alu 1 292 -18 405 172 99 6 chr5 42307463 42307695 -160777837 + AluJo SINE Alu 1 297 -5 512 92 64 29 chr5 42308393 42308566 -160776966 + (TA)n Simple_repeat Simple_repeat 2 180 0 2428 72 3 0 chr5 42308578 42308870 -160776662 - AluSp SINE Alu -19 294 2 896 213 35 0 chr5 42309465 42309639 -160775893 + AluJo SINE Alu 119 298 -14 1991 51 31 8 chr5 42309639 42309893 -160775639 + AluY SINE Alu 50 309 -2 486 0 0 0 chr5 42310019 42310073 -160775459 + (TA)n Simple_repeat Simple_repeat 1 54 0 1901 171 3 28 chr5 42310878 42311205 -160774327 - 7SLRNA srpRNA srpRNA -1 319 1 482 240 260 0 chr5 42311367 42311408 -160774124 + MER5A DNA MER1_type 1 30 -159 1691 116 4 16 chr5 42311408 42311659 -160773873 + AluSx SINE Alu 62 309 -3 482 240 260 0 chr5 42311659 42311767 -160773765 + MER5A DNA MER1_type 30 189 0 2038 123 28 3 chr5 42312524 42312809 -160772723 - AluSx SINE Alu -14 298 7 2272 88 0 7 chr5 42312860 42313155 -160772377 - AluSq SINE Alu -20 293 1 682 153 22 22 chr5 42313264 42313401 -160772131 + FAM SINE Alu 1 41 -8 255 233 41 0 chr5 42313458 42313531 -160772001 + L1MC5 LINE L1 7158 7233 -728 193 222 44 0 chr5 42315353 42315398 -160770134 - L2 LINE L2 -12 3301 3255 2345 94 0 0 chr5 42315762 42316060 -160769472 - AluSg SINE Alu -12 298 1 649 172 9 9 chr5 42316346 42316462 -160769070 + MER3 DNA MER1_type 6 121 -88 785 249 9 6 chr5 42316479 42316684 -160768848 - MLT1J1 LTR MaLR -223 227 15 1432 132 21 155 chr5 42316816 42317013 -160768519 + MSTA LTR MaLR 2 171 -255 816 161 0 0 chr5 42317013 42317131 -160768401 + AluSg/x SINE Alu 171 288 -22 1432 132 21 155 chr5 42317131 42317357 -160768175 + MSTA LTR MaLR 171 426 0 214 317 0 0 chr5 42317360 42317420 -160768112 - MER5A DNA MER1_type -2 187 128 1326 131 0 0 chr5 42317423 42317599 -160767933 + AluSx SINE Alu 1 176 -136 2374 94 0 3 chr5 42317972 42318269 -160767263 + AluSx SINE Alu 1 296 -16 1177 137 0 0 chr5 42318269 42318430 -160767102 + AluSg/x SINE Alu 132 292 -18 208 180 20 0 chr5 42318505 42318555 -160766977 + (TA)n Simple_repeat Simple_repeat 2 52 0 2174 129 0 0 chr5 42318615 42318918 -160766614 + AluSx SINE Alu 1 303 -9 2182 150 110 12 chr5 42318918 42319317 -160766215 + MER65A LTR ERV1 8 445 0 884 236 73 63 chr5 42319404 42319825 -160765707 + MER65A-int LTR ERV1 83 564 -4307 2498 68 3 13 chr5 42319825 42320136 -160765396 - AluY SINE Alu -3 308 1 884 236 73 63 chr5 42320136 42320334 -160765198 + MER65A-int LTR ERV1 564 759 -4112 474 198 81 0 chr5 42320334 42320420 -160765112 - AluJ/FLAM SINE Alu -218 94 2 885 161 15 49 chr5 42320567 42320772 -160764760 + MER31-int LTR ERV1 3533 3730 -2868 824 144 6 77 chr5 42320852 42321033 -160764499 + MER31-int LTR ERV1 3730 3897 -2701 417 211 0 0 chr5 42321041 42321117 -160764415 - FLAM_A SINE Alu -22 120 45 437 158 100 25 chr5 42321117 42321237 -160764295 + MER31-int LTR ERV1 3884 4012 -2586 1505 202 80 100 chr5 42321258 42321658 -160763874 + MER31-int LTR ERV1 4602 5008 -1590 2217 129 0 10 chr5 42321658 42321793 -160763739 + AluSq SINE Alu 1 136 -177 2384 87 0 13 chr5 42321793 42322104 -160763428 + AluY SINE Alu 1 307 -4 2217 129 0 10 chr5 42322104 42322278 -160763254 + AluSq SINE Alu 136 307 -6 2220 103 17 0 chr5 42322284 42322576 -160762956 + AluSp SINE Alu 1 297 -16 1505 202 80 100 chr5 42322576 42322627 -160762905 + MER31-int LTR ERV1 5013 5064 -1534 2131 112 0 0 chr5 42322627 42322945 -160762587 - AluSx SINE Alu 0 318 1 1505 202 80 100 chr5 42322945 42323039 -160762493 + MER31-int LTR ERV1 5064 5158 -1440 1745 199 0 3 chr5 42323039 42323345 -160762187 + AluJb SINE Alu 1 305 -7 1505 202 80 100 chr5 42323345 42323534 -160761998 + MER31-int LTR ERV1 5158 5349 -1249 16908 52 4 0 chr5 42323534 42326385 -160759147 - L1PA5 LINE L1 -4 6150 3282 1505 202 80 100 chr5 42326385 42326486 -160759046 + MER31-int LTR ERV1 5349 5451 -1147 250 80 40 0 chr5 42326486 42326536 -160758996 + (TTA)n Simple_repeat Simple_repeat 2 53 0 1894 164 0 0 chr5 42326539 42326819 -160758713 - AluSx SINE Alu -30 282 3 1987 125 28 0 chr5 42326821 42327110 -160758422 - AluSx SINE Alu -15 297 1 1505 202 80 100 chr5 42327110 42327213 -160758319 + MER31-int LTR ERV1 5454 5584 -1014 329 236 0 42 chr5 42327233 42327305 -160758227 + MER31-int LTR ERV1 3884 3952 -984 2396 89 0 0 chr5 42327367 42327670 -160757862 + AluY SINE Alu 1 303 -8 1887 249 77 28 chr5 42327692 42328202 -160757330 + MER31-int LTR ERV1 3598 4132 -739 672 198 90 6 chr5 42328205 42328382 -160757150 + MER31-int LTR ERV1 4240 4431 -440 2751 161 16 31 chr5 42328390 42328547 -160756985 - L1MA3 LINE L1 0 6305 6147 2221 121 0 0 chr5 42328547 42328845 -160756687 + AluSc SINE Alu 1 298 -11 2751 161 16 31 chr5 42328845 42329239 -160756293 - L1MA3 LINE L1 -158 6147 5762 3196 86 20 14 chr5 42329239 42329680 -160755852 - MLT2A1 LTR ERVL 0 444 1 45726 62 6 12 chr5 42329680 42331314 -160754218 - HERVL-A1 LTR ERVL 0 5654 4011 2335 92 0 0 chr5 42331314 42331609 -160753923 + AluSx SINE Alu 1 295 -17 45726 62 6 12 chr5 42331609 42333805 -160751727 - HERVL-A1 LTR ERVL -1643 4011 1802 2344 104 0 0 chr5 42333805 42334104 -160751428 + AluSx SINE Alu 1 299 -13 45726 62 6 12 chr5 42334104 42334494 -160751038 - HERVL-A1 LTR ERVL -3852 1802 1411 2238 111 3 0 chr5 42334494 42334791 -160750741 - AluSx SINE Alu -2 310 13 45726 62 6 12 chr5 42334791 42336259 -160749273 - HERVL-A1 LTR ERVL -4243 1411 1 2661 102 82 5 chr5 42336259 42336299 -160749233 - MLT2A1 LTR ERVL 0 444 409 432 0 0 0 chr5 42336299 42336347 -160749185 + (CA)n Simple_repeat Simple_repeat 2 49 0 2661 102 82 5 chr5 42336347 42336718 -160748814 - MLT2A1 LTR ERVL -35 409 1 415 256 17 26 chr5 42337002 42337119 -160748413 + HsTC2 DNA Tc2 1282 1573 -325 1066 233 115 58 chr5 42337137 42337571 -160747961 - LTR40c LTR ERVL -6 459 1 808 187 30 123 chr5 42337571 42337771 -160747761 + HsTC2 DNA Tc2 1567 1784 -114 2446 76 0 3 chr5 42337771 42338073 -160747459 - AluSc SINE Alu -8 301 1 808 187 30 123 chr5 42338073 42338152 -160747380 + HsTC2 DNA Tc2 1784 1797 -101 2347 110 0 0 chr5 42338152 42338462 -160747070 - AluSg SINE Alu 0 310 1 808 187 30 123 chr5 42338462 42338554 -160746978 + HsTC2 DNA Tc2 1797 1896 -2 1301 148 0 38 chr5 42338769 42339017 -160746515 + AluJb SINE Alu 83 322 0 23 33 0 0 chr5 42339329 42339359 -160746173 + AT_rich Low_complexity Low_complexity 1 30 0 447 141 0 0 chr5 42339501 42339572 -160745960 + AluS SINE Alu 2 72 -246 1753 124 17 27 chr5 42339572 42339871 -160745661 + LTR7 LTR ERV1 153 448 -2 1756 97 0 4 chr5 42339871 42340099 -160745433 + AluSq SINE Alu 72 298 -15 1536 167 52 11 chr5 42340370 42340657 -160744875 - AluJo SINE Alu -13 299 1 2457 207 49 67 chr5 42340858 42341086 -160744446 - L1ME LINE L1 -371 6031 5800 2278 121 0 10 chr5 42341086 42341399 -160744133 - AluSq SINE Alu -3 310 1 2457 207 49 67 chr5 42341399 42341730 -160743802 - L1ME LINE L1 -602 5800 5465 1796 124 83 0 chr5 42341730 42341996 -160743536 - AluSq SINE Alu -25 288 1 2457 207 49 67 chr5 42341996 42342172 -160743360 - L1ME LINE L1 -937 5465 5287 2375 106 0 6 chr5 42342172 42342484 -160743048 + AluSx SINE Alu 1 310 -2 2164 126 7 3 chr5 42342487 42342796 -160742736 + AluSp SINE Alu 1 310 -3 2457 207 49 67 chr5 42342796 42343368 -160742164 - L1ME LINE L1 -1117 5285 4747 763 150 0 0 chr5 42343375 42343488 -160742044 - AluSc SINE Alu -26 283 171 399 206 15 0 chr5 42343488 42343556 -160741976 - AluJ/FLAM SINE Alu -233 69 1 2184 111 3 0 chr5 42343599 42343887 -160741645 - AluSq SINE Alu -24 289 1 1142 238 67 67 chr5 42343888 42344098 -160741434 - L1ME LINE L1 -1747 4635 4427 2266 104 0 3 chr5 42344098 42344397 -160741135 + AluSg SINE Alu 1 298 -12 1142 238 67 67 chr5 42344397 42344547 -160740985 - L1ME LINE L1 -1955 4427 4279 3757 105 0 8 chr5 42344547 42345062 -160740470 - MER9 LTR ERVK 0 511 1 1142 238 67 67 chr5 42345062 42345237 -160740295 - L1ME LINE L1 -2103 4279 1342 2129 119 0 7 chr5 42345785 42346079 -160739453 - AluSg SINE Alu -18 292 1 2234 127 48 20 chr5 42346598 42346952 -160738580 - THE1B LTR MaLR 0 364 1 8189 127 118 17 chr5 42346952 42347259 -160738273 - THE1B-int LTR MaLR 0 1580 1305 2120 108 30 3 chr5 42347259 42347554 -160737978 - AluSx SINE Alu -9 303 1 8189 127 118 17 chr5 42347554 42348682 -160736850 - THE1B-int LTR MaLR -275 1305 1 2053 122 78 23 chr5 42348682 42348720 -160736812 - THE1B LTR MaLR 0 364 330 1507 113 74 58 chr5 42348720 42348977 -160736555 + AluSg SINE Alu 13 273 -37 2053 122 78 23 chr5 42348977 42349283 -160736249 - THE1B LTR MaLR -34 330 1 2118 125 7 0 chr5 42349306 42349594 -160735938 + AluSx SINE Alu 1 290 -22 1567 104 170 4 chr5 42349793 42350052 -160735480 + AluSg SINE Alu 1 302 -8 1208 178 13 18 chr5 42350322 42350488 -160735044 - AluSg/x SINE Alu -12 300 134 2158 126 0 3 chr5 42350488 42350789 -160734743 - AluSx SINE Alu -12 300 1 1208 178 13 18 chr5 42350789 42350847 -160734685 - AluSg/x SINE Alu -178 134 77 2344 86 17 0 chr5 42350856 42351148 -160734384 - AluSp SINE Alu -16 297 1 2255 112 0 0 chr5 42351644 42351938 -160733594 - AluSp SINE Alu -19 294 1 287 349 28 0 chr5 42352064 42352173 -160733359 - L2 LINE L2 -602 2712 2601 2073 120 3 13 chr5 42352470 42352770 -160732762 - AluSx SINE Alu -15 297 1 729 180 0 43 chr5 42353349 42353488 -160732044 + FLAM_C SINE Alu 1 133 0 2224 97 0 27 chr5 42353511 42353810 -160731722 + AluSp SINE Alu 1 291 -22 843 179 61 33 chr5 42353843 42354055 -160731477 + AluJo SINE Alu 85 302 -10 256 288 17 85 chr5 42354112 42354230 -160731302 + MER5A DNA MER1_type 80 189 0 2147 128 3 3 chr5 42354926 42355231 -160730301 + AluSx SINE Alu 1 305 -7 1187 150 5 60 chr5 42355474 42355674 -160729858 - MER5A DNA MER1_type 0 189 1 2168 111 0 10 chr5 42355976 42356273 -160729259 - AluSg SINE Alu -16 294 1 2461 57 3 3 chr5 42356948 42357245 -160728287 - AluY SINE Alu -14 297 1 338 284 56 15 chr5 42358070 42358217 -160727315 + MIR SINE MIR 18 167 -59 24 53 0 0 chr5 42358503 42358541 -160726991 + AT_rich Low_complexity Low_complexity 1 38 0 32 26 0 0 chr5 42358683 42358722 -160726810 + AT_rich Low_complexity Low_complexity 1 39 0 793 206 42 42 chr5 42358980 42359145 -160726387 - FAM SINE Alu -10 165 1 685 168 80 8 chr5 42359190 42359315 -160726217 + L1MB7 LINE L1 5934 6067 -117 7204 55 10 25 chr5 42359436 42361129 -160724403 + SVA Other Other 16 1409 0 1121 107 0 13 chr5 42361306 42361455 -160724077 + AluSq/x SINE Alu 1 147 -166 284 228 0 0 chr5 42361457 42361514 -160724018 + FLAM SINE Alu 76 132 -1 1091 158 38 5 chr5 42361540 42361724 -160723808 - AluJo SINE Alu -116 196 7 1815 159 0 3 chr5 42361791 42362095 -160723437 - AluJb SINE Alu 0 303 1 1977 138 3 3 chr5 42362370 42362668 -160722864 + AluSx SINE Alu 1 298 -14 1734 115 77 49 chr5 42364167 42364453 -160721079 + AluSc SINE Alu 1 294 -15 21 36 0 0 chr5 42364540 42364568 -160720964 + AT_rich Low_complexity Low_complexity 1 28 0 1808 87 102 4 chr5 42364570 42364836 -160720696 - L1MA1 LINE L1 -4 6298 6007 1238 173 4 18 chr5 42365064 42365236 -160720296 - AluJb SINE Alu -6 306 136 2299 90 7 10 chr5 42365236 42365537 -160719995 - AluSx SINE Alu -12 300 1 1238 173 4 18 chr5 42365537 42365589 -160719943 - AluJb SINE Alu -176 136 85 393 266 67 110 chr5 42366198 42366500 -160719032 + MLT1J LTR MaLR 51 339 -70 2200 114 3 10 chr5 42366639 42366947 -160718585 - AluSg SINE Alu -4 306 1 1648 174 23 27 chr5 42368077 42368376 -160717156 + AluJb SINE Alu 1 298 -14 2399 96 0 6 chr5 42368379 42368691 -160716841 + AluSx SINE Alu 1 310 -2 354 314 18 47 chr5 42368755 42368924 -160716608 - MIR3 SINE MIR -24 184 21 226 200 62 15 chr5 42369355 42369420 -160716112 + HsTC2 DNA Tc2 915 982 -916 1701 148 3 58 chr5 42369681 42369810 -160715722 + AluJo SINE Alu 7 142 -170 1786 177 7 0 chr5 42369810 42370120 -160715412 + AluSx SINE Alu 1 312 0 1701 148 3 58 chr5 42370120 42370300 -160715232 + AluJo SINE Alu 142 299 -13 1736 164 3 52 chr5 42370520 42370844 -160714688 + AluJo SINE Alu 2 309 -3 2106 119 3 0 chr5 42370881 42371175 -160714357 - AluSg SINE Alu -15 295 1 331 146 0 0 chr5 42371264 42371312 -160714220 + Alu SINE Alu 3 50 -252 2174 141 0 0 chr5 42371326 42371638 -160713894 + AluSx SINE Alu 1 312 0 2297 116 0 3 chr5 42372051 42372362 -160713170 + AluSg SINE Alu 1 310 0 2163 90 12 65 chr5 42372678 42372824 -160712708 + AluSx SINE Alu 1 153 -159 2438 75 13 3 chr5 42372824 42373131 -160712401 + AluY SINE Alu 1 310 -1 2163 90 12 65 chr5 42373131 42373307 -160712225 + AluSx SINE Alu 153 306 -6 1586 138 26 4 chr5 42374178 42374409 -160711123 + AluSg SINE Alu 1 236 -74 1480 196 49 3 chr5 42374462 42374748 -160710784 + AluJo SINE Alu 1 299 -13 241 275 44 44 chr5 42374796 42374887 -160710645 - MIR3 SINE MIR -41 167 77 25 0 0 0 chr5 42375208 42375233 -160710299 + AT_rich Low_complexity Low_complexity 1 25 0 295 253 66 22 chr5 42375307 42375398 -160710134 - MIR3 SINE MIR -4 204 110 272 201 21 167 chr5 42376077 42376143 -160709389 + L1MC5 LINE L1 7110 7145 -816 2098 132 0 3 chr5 42376143 42376453 -160709079 + AluSx SINE Alu 1 309 -3 272 201 21 167 chr5 42376453 42376530 -160709002 + L1MC5 LINE L1 7145 7232 -729 343 254 69 81 chr5 42376638 42376984 -160708548 + L1MC5 LINE L1 7255 7596 -365 1367 144 0 10 chr5 42377035 42377243 -160708289 + AluJb SINE Alu 85 290 -22 2111 105 20 10 chr5 42377555 42377859 -160707673 + AluSx SINE Alu 2 308 -4 291 54 0 0 chr5 42377872 42377909 -160707623 + (TG)n Simple_repeat Simple_repeat 1 37 0 1673 173 3 11 chr5 42377922 42378206 -160707326 - AluJb SINE Alu -30 282 1 21 0 0 0 chr5 42378579 42378600 -160706932 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 42378745 42378767 -160706765 + AT_rich Low_complexity Low_complexity 1 22 0 1711 80 0 13 chr5 42378959 42379183 -160706349 + AluY SINE Alu 1 221 -90 2017 139 0 0 chr5 42379353 42379647 -160705885 + AluSx SINE Alu 1 294 -18 3512 113 87 101 chr5 42379886 42380013 -160705519 + L1MB3 LINE L1 5383 5510 -673 2160 117 10 0 chr5 42380013 42380312 -160705220 + AluSq SINE Alu 1 302 -11 3512 113 87 101 chr5 42380312 42380822 -160704710 + L1MB3 LINE L1 5510 6025 -158 2249 108 0 0 chr5 42380822 42381117 -160704415 - AluSq SINE Alu -18 295 1 3512 113 87 101 chr5 42381117 42381233 -160704299 + L1MB3 LINE L1 6025 6141 -42 2346 89 0 22 chr5 42381233 42381549 -160703983 + AluY SINE Alu 1 309 -2 2238 107 7 3 chr5 42381559 42381869 -160703663 + AluSp SINE Alu 1 311 -2 3512 113 87 101 chr5 42381869 42381914 -160703618 + L1MB3 LINE L1 6150 6183 0 934 179 6 0 chr5 42382041 42382203 -160703329 - AluSg/x SINE Alu -12 300 138 393 192 77 0 chr5 42382467 42382571 -160702961 - L1MB8 LINE L1 -1 6177 6066 419 299 109 58 chr5 42382598 42382818 -160702714 + HAL1 LINE L1 1045 1252 -1255 1224 191 13 13 chr5 42382818 42383049 -160702483 + MER46A DNA MER2_type 2 232 -4 419 299 109 58 chr5 42383049 42383350 -160702182 + HAL1 LINE L1 1252 1593 -914 1529 215 32 29 chr5 42383351 42383727 -160701805 + L1MB8 LINE L1 5802 6178 0 259 164 0 18 chr5 42383811 42383866 -160701666 + L1M4 LINE L1 3877 3930 -2216 1717 180 3 20 chr5 42383936 42384242 -160701290 + AluJb SINE Alu 1 301 -11 1255 208 102 7 chr5 42384258 42384532 -160701000 + AluJo SINE Alu 5 304 -8 2238 87 3 10 chr5 42384549 42384847 -160700685 + AluSp SINE Alu 1 296 -17 1889 166 0 0 chr5 42385420 42385710 -160699822 + AluSx SINE Alu 1 290 -22 2148 96 0 4 chr5 42385793 42386073 -160699459 + AluSc SINE Alu 1 279 -30 2209 97 7 0 chr5 42386220 42386510 -160699022 - AluSp SINE Alu -21 292 1 829 146 8 0 chr5 42386520 42386643 -160698889 - FLAM_C SINE Alu -19 124 1 2503 57 0 0 chr5 42386782 42387079 -160698453 + AluY SINE Alu 1 297 -14 1914 82 0 16 chr5 42387097 42387340 -160698192 + AluSq SINE Alu 55 293 -20 1847 141 0 14 chr5 42387357 42387640 -160697892 + AluSg SINE Alu 1 279 -31 754 171 270 5 chr5 42387640 42387851 -160697681 + L1MB7 LINE L1 5663 5929 -255 376 234 47 0 chr5 42387869 42388040 -160697492 + (TA)n Simple_repeat Simple_repeat 1 179 0 1291 177 28 24 chr5 42388049 42388298 -160697234 + L1MB7 LINE L1 5919 6168 -16 735 246 44 36 chr5 42388632 42388884 -160696648 - L1ME3 LINE L1 -7 6155 5902 1108 217 118 33 chr5 42388919 42389191 -160696341 - AluJo SINE Alu -6 296 2 1833 137 22 4 chr5 42389230 42389501 -160696031 + AluSq SINE Alu 1 276 -37 296 133 0 0 chr5 42389501 42389546 -160695986 + AluSp/q SINE Alu 238 282 -21 434 287 27 40 chr5 42389654 42389804 -160695728 - MIR SINE MIR -75 187 40 1949 157 0 3 chr5 42389843 42390148 -160695384 + AluJb SINE Alu 2 305 -7 1508 238 33 66 chr5 42390692 42391146 -160694386 + MLT1H LTR MaLR 3 441 -108 1825 108 44 30 chr5 42391213 42391508 -160694024 + Tigger2a DNA MER2_type 1 299 -135 321 85 0 0 chr5 42391492 42391539 -160693993 + U7 snRNA snRNA 2 48 -15 * 617 161 125 83 chr5 42391586 42391754 -160693778 + Tigger2a DNA MER2_type 270 444 0 2137 123 0 3 chr5 42392860 42393161 -160692371 - AluSx SINE Alu -12 300 1 303 298 24 0 chr5 42394538 42394622 -160690910 + L2 LINE L2 3227 3312 -1 512 242 222 31 chr5 42394801 42394993 -160690539 - MIR SINE MIR -17 245 7 260 27 27 0 chr5 42395085 42395122 -160690410 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2375 84 0 0 chr5 42395224 42395520 -160690012 + AluY SINE Alu 1 296 -15 2205 98 3 3 chr5 42395648 42395935 -160689597 + AluSp SINE Alu 1 287 -26 284 253 24 12 chr5 42396262 42396345 -160689187 + AluJo SINE Alu 121 204 -98 400 95 0 189 chr5 42396625 42396667 -160688865 + MADE1 DNA Mariner 1 17 -63 1859 57 0 9 chr5 42396667 42396894 -160688638 - AluY SINE Alu -5 306 82 400 95 0 189 chr5 42396894 42396946 -160688586 + MADE1 DNA Mariner 17 77 -3 1505 195 11 3 chr5 42397029 42397341 -160688191 + AluJb SINE Alu 1 312 0 2347 97 3 0 chr5 42397425 42397725 -160687807 + AluSx SINE Alu 1 301 -11 2112 112 41 0 chr5 42398159 42398453 -160687079 - AluSp SINE Alu -7 306 1 1545 183 0 4 chr5 42398460 42398723 -160686809 - AluJb SINE Alu -18 294 33 1975 144 0 10 chr5 42398737 42399036 -160686496 - AluSx SINE Alu -16 296 1 2226 104 7 0 chr5 42399230 42399528 -160686004 + AluSx SINE Alu 1 300 -12 1328 164 19 0 chr5 42399535 42399749 -160685783 + AluJo SINE Alu 84 301 -11 281 292 108 36 chr5 42399778 42400019 -160685513 - L1MC4 LINE L1 -46 7925 7639 1586 166 10 59 chr5 42400019 42400326 -160685206 + AluJb SINE Alu 1 292 -20 281 292 108 36 chr5 42400326 42400458 -160685074 - L1MC4 LINE L1 -332 7639 7518 1290 179 0 0 chr5 42400559 42400760 -160684772 + AluJo SINE Alu 10 210 -102 455 176 69 46 chr5 42400810 42400941 -160684591 - MIR SINE MIR -10 252 119 308 171 11 102 chr5 42402340 42402391 -160683141 - MADE1 DNA Mariner 0 80 39 2233 114 3 0 chr5 42402391 42402689 -160682843 + AluSg SINE Alu 1 299 -11 308 171 11 102 chr5 42402689 42402725 -160682807 - MADE1 DNA Mariner -41 39 1 2538 51 10 0 chr5 42402762 42403056 -160682476 - AluY SINE Alu -14 297 1 304 209 79 40 chr5 42403160 42403253 -160682279 + HsTC2 DNA Tc2 1 1815 -83 22 56 0 0 chr5 42403253 42403289 -160682243 + AT_rich Low_complexity Low_complexity 1 36 0 675 163 17 2 chr5 42403439 42403677 -160681855 + AluJ SINE Alu 2 300 -12 1841 156 0 0 chr5 42403704 42403979 -160681553 + AluJb SINE Alu 8 282 -30 1961 209 20 43 chr5 42403996 42404110 -160681422 + L1M4 LINE L1 4504 4619 -1527 1858 160 17 0 chr5 42404110 42404410 -160681122 - AluSx SINE Alu -7 305 1 1961 209 20 43 chr5 42404410 42404508 -160681024 + L1M4 LINE L1 4619 4718 -1428 1808 154 7 20 chr5 42404508 42404806 -160680726 + AluJb SINE Alu 1 294 -18 1961 209 20 43 chr5 42404806 42405132 -160680400 + L1M4 LINE L1 4718 5031 -1115 1189 164 0 0 chr5 42405158 42405353 -160680179 - L1PA16 LINE L1 -9 6157 5963 1226 106 0 0 chr5 42405718 42405879 -160679653 - AluSg/x SINE Alu -18 292 132 2437 97 0 0 chr5 42405879 42406190 -160679342 - AluY SINE Alu 0 311 1 1638 201 0 41 chr5 42406379 42406697 -160678835 - AluJo SINE Alu -7 305 1 2164 93 0 39 chr5 42407088 42407398 -160678134 - AluSx SINE Alu -14 298 1 2524 80 0 0 chr5 42407412 42407723 -160677809 - AluY SINE Alu 0 311 1 345 298 147 16 chr5 42407850 42407958 -160677574 + L1MC4a LINE L1 7118 7210 -598 2045 147 7 7 chr5 42407958 42408264 -160677268 + AluSx SINE Alu 1 306 -6 345 298 147 16 chr5 42408264 42408407 -160677125 + L1MC4a LINE L1 7210 7402 -406 1874 162 3 10 chr5 42408412 42408720 -160676812 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr5 42408838 42408859 -160676673 + AT_rich Low_complexity Low_complexity 1 21 0 1971 93 100 0 chr5 42408968 42409238 -160676294 + AluSg SINE Alu 1 297 -13 1238 154 128 41 chr5 42409246 42409512 -160676020 + AluJb SINE Alu 5 293 -19 1846 154 0 17 chr5 42409582 42409880 -160675652 + AluJb SINE Alu 10 302 -10 2011 132 0 20 chr5 42409973 42410276 -160675256 + AluSg SINE Alu 2 298 -12 1033 216 14 0 chr5 42410433 42410641 -160674891 + AluJo SINE Alu 87 297 -15 2250 102 3 0 chr5 42410741 42411035 -160674497 + AluSq SINE Alu 5 299 -14 188 268 100 44 chr5 42411093 42411200 -160674332 + MIR SINE MIR 40 145 -63 1904 172 0 0 chr5 42411293 42411595 -160673937 + AluJb SINE Alu 1 302 -10 2427 83 3 3 chr5 42411763 42412065 -160673467 + AluSp SINE Alu 1 302 -11 1878 124 3 60 chr5 42412070 42412205 -160673327 + AluSx SINE Alu 1 142 -171 2171 94 3 7 chr5 42412205 42412491 -160673041 + AluSc SINE Alu 1 285 -24 1878 124 3 60 chr5 42412491 42412685 -160672847 + AluSx SINE Alu 142 313 0 2233 120 0 0 chr5 42413113 42413405 -160672127 - AluSx SINE Alu -19 293 2 1970 134 3 53 chr5 42414871 42415191 -160670341 + AluSx SINE Alu 1 304 -8 2279 90 10 10 chr5 42415800 42416099 -160669433 - AluY SINE Alu -12 299 1 273 75 0 0 chr5 42416209 42416249 -160669283 + (TG)n Simple_repeat Simple_repeat 2 41 0 2046 107 0 44 chr5 42416286 42416421 -160669111 + AluSp SINE Alu 1 140 -174 2139 101 0 7 chr5 42416421 42416698 -160668834 + AluSg SINE Alu 1 275 -35 210 37 0 0 chr5 42416706 42416733 -160668799 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2046 107 0 44 chr5 42416733 42416915 -160668617 + AluSp SINE Alu 147 314 0 2206 174 18 82 chr5 42417463 42417671 -160667861 + L1MB3 LINE L1 5651 5871 -312 2153 98 24 0 chr5 42417671 42417958 -160667574 + AluSx SINE Alu 18 311 -1 2206 174 18 82 chr5 42417958 42418320 -160667212 + L1MB3 LINE L1 5871 6180 -3 2079 113 7 0 chr5 42418504 42418788 -160666744 - AluSq SINE Alu -25 288 3 1996 158 7 0 chr5 42418792 42419102 -160666430 - AluJb SINE Alu 0 312 1 2529 64 0 0 chr5 42419155 42419451 -160666081 + AluSx SINE Alu 1 296 -16 1718 156 10 10 chr5 42419577 42419865 -160665667 + AluSx SINE Alu 7 294 -18 237 65 0 0 chr5 42419907 42419938 -160665594 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2146 114 0 0 chr5 42419942 42420223 -160665309 - AluY SINE Alu -30 281 1 2418 83 3 3 chr5 42420293 42420593 -160664939 + AluSp SINE Alu 2 301 -12 1869 142 17 10 chr5 42420705 42421000 -160664532 + AluSx SINE Alu 1 297 -15 2146 125 3 3 chr5 42421170 42421475 -160664057 + AluSx SINE Alu 1 305 -7 1719 162 54 10 chr5 42421476 42421772 -160663760 + AluJb SINE Alu 1 309 -3 2285 93 3 0 chr5 42422057 42422346 -160663186 + AluSx SINE Alu 1 290 -22 1491 175 79 10 chr5 42422542 42422833 -160662699 + AluJb SINE Alu 1 311 -1 508 171 0 0 chr5 42422857 42422956 -160662576 - AluSg/x SINE Alu 0 308 210 * 533 123 0 25 chr5 42422949 42423030 -160662502 - AluJb SINE Alu -162 150 72 2171 87 7 3 chr5 42423086 42423372 -160662160 + AluSc SINE Alu 5 291 -18 543 161 125 18 chr5 42423374 42423486 -160662046 + FLAM_C SINE Alu 3 126 -17 48 60 0 0 chr5 42423486 42423569 -160661963 + AT_rich Low_complexity Low_complexity 1 83 0 1026 186 43 103 chr5 42423712 42424219 -160661313 + L1MCc LINE L1 438 985 -4923 1665 147 4 21 chr5 42424219 42424498 -160661034 + AluSx SINE Alu 39 312 0 1026 186 43 103 chr5 42424498 42424533 -160660999 + L1MCc LINE L1 985 1021 -4887 2098 105 3 17 chr5 42424546 42424840 -160660692 + AluSg SINE Alu 1 290 -20 2056 127 28 0 chr5 42424849 42425132 -160660400 + AluSx SINE Alu 1 291 -21 325 119 0 0 chr5 42425143 42425185 -160660347 + Alu SINE Alu 3 44 -257 2132 124 10 0 chr5 42425332 42425631 -160659901 + AluSx SINE Alu 1 302 -10 438 264 123 26 chr5 42425641 42425796 -160659736 + L1MCc LINE L1 1271 1493 -4935 1699 170 109 3 chr5 42426147 42426477 -160659055 + MLT1A1 LTR MaLR 1 365 0 265 315 93 9 chr5 42426489 42426597 -160658935 + L2 LINE L2 3152 3268 -4 2378 78 3 3 chr5 42426637 42426933 -160658599 - AluSp SINE Alu -17 296 1 2202 113 3 7 chr5 42427257 42427559 -160657973 - AluSx SINE Alu -11 301 1 333 241 81 0 chr5 42427985 42428072 -160657460 + MER5A DNA MER1_type 13 106 -83 2359 75 0 0 chr5 42428972 42429281 -160656251 - AluY SINE Alu 0 309 1 1065 98 18 79 chr5 42429296 42429327 -160656205 + L1MA2 LINE L1 6111 6142 -163 1996 118 14 4 chr5 42429327 42429633 -160655899 + AluSg SINE Alu 1 309 0 1065 98 18 79 chr5 42429633 42429775 -160655757 + L1MA2 LINE L1 6142 6291 -14 2204 103 0 19 chr5 42429775 42430085 -160655447 + AluSg SINE Alu 5 308 -2 1065 98 18 79 chr5 42430085 42430098 -160655434 + L1MA2 LINE L1 6291 6275 -30 369 0 0 0 chr5 42430098 42430139 -160655393 + (CA)n Simple_repeat Simple_repeat 2 42 0 1065 98 18 79 chr5 42430139 42430170 -160655362 + L1MA2 LINE L1 6274 6305 0 26 0 0 0 chr5 42430170 42430196 -160655336 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 42430660 42430698 -160654834 + AT_rich Low_complexity Low_complexity 1 38 0 1607 113 5 0 chr5 42430785 42431006 -160654526 - AluSg/x SINE Alu -12 298 77 2267 73 38 0 chr5 42431008 42431295 -160654237 - AluY SINE Alu -13 298 1 646 96 0 0 chr5 42431295 42431378 -160654154 - AluSc SINE Alu -225 84 2 1428 173 32 51 chr5 42431385 42431557 -160653975 - AluJb SINE Alu -6 306 132 2030 125 26 13 chr5 42431557 42431860 -160653672 - AluSx SINE Alu -5 307 1 2227 48 4 7 chr5 42431868 42432139 -160653393 - AluY SINE Alu -2 309 40 2165 112 3 0 chr5 42432139 42432426 -160653106 - AluSg SINE Alu -22 288 1 1428 173 32 51 chr5 42432426 42432555 -160652977 - AluJb SINE Alu -185 127 1 1757 148 0 44 chr5 42432555 42432853 -160652679 - AluJb SINE Alu -2 310 26 1895 137 27 3 chr5 42432883 42433176 -160652356 + AluSx SINE Alu 1 300 -12 1726 174 13 3 chr5 42433317 42433621 -160651911 + AluJo SINE Alu 1 307 -5 2205 86 10 13 chr5 42434434 42434736 -160650796 + AluSq SINE Alu 1 301 -12 225 127 28 56 chr5 42435625 42435696 -160649836 + GA-rich Low_complexity Low_complexity 5 73 0 459 231 116 0 chr5 42436873 42436994 -160648538 + MER58B DNA MER1_type 206 340 -1 1170 177 76 48 chr5 42437019 42437167 -160648365 - Charlie1 DNA MER1_type -15 2746 2604 2208 106 3 23 chr5 42437167 42437470 -160648062 + AluSg SINE Alu 1 297 -13 1170 177 76 48 chr5 42437470 42437630 -160647902 - Charlie1 DNA MER1_type -157 2604 2429 488 190 30 32 chr5 42437630 42437807 -160647725 - LTR64 LTR ERVK 0 558 346 497 237 0 0 chr5 42437814 42437907 -160647625 + AluJ/FLAM SINE Alu 3 95 -217 1067 149 48 0 chr5 42437907 42438075 -160647457 + AluJo/FRAM SINE Alu 136 311 -1 1582 189 15 30 chr5 42438075 42438403 -160647129 - LTR64 LTR ERVK -235 323 1 256 204 14 169 chr5 42438403 42438468 -160647064 - Charlie1 DNA MER1_type -341 2420 2382 2285 119 0 0 chr5 42438468 42438779 -160646753 + AluSq SINE Alu 3 313 0 256 204 14 169 chr5 42438779 42438824 -160646708 - Charlie1 DNA MER1_type -379 2382 2332 * 1580 231 59 30 chr5 42438815 42438845 -160646687 - Charlie1 DNA MER1_type -832 1929 1901 2015 124 24 3 chr5 42438845 42438990 -160646542 - AluSq SINE Alu -16 297 156 2273 104 10 10 chr5 42438990 42439299 -160646233 - AluSq SINE Alu -4 309 1 2015 124 24 3 chr5 42439299 42439444 -160646088 - AluSq SINE Alu -157 156 1 1580 231 59 30 chr5 42439444 42439630 -160645902 - Charlie1 DNA MER1_type -860 1901 1722 938 199 0 12 chr5 42439630 42439796 -160645736 + FAM SINE Alu 1 164 -11 1580 231 59 30 chr5 42439796 42440016 -160645516 - Charlie1 DNA MER1_type -1039 1722 1479 513 234 29 58 chr5 42440152 42440289 -160645243 + MER54A LTR ERVL 484 616 -285 1175 86 103 0 chr5 42440292 42440467 -160645065 - MER30 DNA MER1_type -35 195 3 1743 194 7 0 chr5 42440467 42440761 -160644771 + MER54A LTR ERVL 599 894 -7 2185 105 3 10 chr5 42440762 42441068 -160644464 + AluSp SINE Alu 1 304 -9 1565 118 3 84 chr5 42441107 42441394 -160644138 + MER75 DNA T2_type 1 264 -250 1991 138 3 3 chr5 42441633 42441769 -160643763 + AluSx SINE Alu 1 136 -176 2290 92 14 0 chr5 42441769 42442063 -160643469 + AluSx SINE Alu 1 298 -14 1991 138 3 3 chr5 42442063 42442217 -160643315 + AluSx SINE Alu 135 291 -21 1480 124 22 137 chr5 42442322 42442644 -160642888 + AluYb8 SINE Alu 1 285 -33 216 0 0 0 chr5 42442644 42442668 -160642864 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2292 94 7 10 chr5 42442671 42442979 -160642553 + AluSx SINE Alu 1 307 -5 2232 77 14 3 chr5 42442990 42443277 -160642255 + AluSx SINE Alu 20 309 -3 1107 92 104 0 chr5 42443288 42443452 -160642080 + AluSg/x SINE Alu 119 299 -11 264 246 23 154 chr5 42444119 42444424 -160641108 - L1ME LINE L1 -379 5742 5478 2386 67 0 13 chr5 42444687 42444987 -160640545 - AluY SINE Alu -15 296 1 1720 174 24 3 chr5 42444987 42445285 -160640247 - AluJb SINE Alu -6 306 3 675 186 335 13 chr5 42445420 42445656 -160639876 - MLT1E2 LTR MaLR -228 398 87 1968 145 3 0 chr5 42446117 42446421 -160639111 + AluSq SINE Alu 1 305 -8 2273 105 0 3 chr5 42446447 42446743 -160638789 - AluSg SINE Alu -15 295 1 233 0 62 0 chr5 42446743 42446775 -160638757 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2057 120 22 0 chr5 42446775 42447049 -160638483 - AluSc SINE Alu -29 280 1 2021 134 0 0 chr5 42447076 42447388 -160638144 + AluSq SINE Alu 1 312 0 301 86 35 0 chr5 42447413 42447471 -160638061 + A-rich Low_complexity Low_complexity 1 60 0 2222 101 0 7 chr5 42447611 42447907 -160637625 - AluSx SINE Alu -18 294 1 2250 82 0 14 chr5 42447936 42448227 -160637305 - AluY SINE Alu -23 288 2 531 238 165 29 chr5 42448248 42448454 -160637078 - L1MC5 LINE L1 -51 7910 7677 1602 178 0 45 chr5 42448519 42448732 -160636800 - AluJb SINE Alu -5 307 111 2543 50 27 3 chr5 42448732 42449033 -160636499 + AluY SINE Alu 1 308 -3 1602 178 0 45 chr5 42449033 42449128 -160636404 - AluJb SINE Alu -201 111 13 2353 198 166 64 chr5 42449135 42449583 -160635949 - MER21B LTR ERV1 -60 803 253 1928 150 16 13 chr5 42449583 42449889 -160635643 + AluJo SINE Alu 1 307 -5 2353 198 166 64 chr5 42449889 42450156 -160635376 - MER21B LTR ERV1 -610 253 15 2239 81 0 34 chr5 42450161 42450458 -160635074 - AluY SINE Alu -24 287 1 1626 126 4 4 chr5 42450709 42450939 -160634593 - AluSx SINE Alu -48 264 35 21 0 0 0 chr5 42450943 42450964 -160634568 + AT_rich Low_complexity Low_complexity 1 21 0 273 91 0 0 chr5 42450964 42451008 -160634524 - L1MA3 LINE L1 0 6305 6262 2223 114 0 3 chr5 42451161 42451459 -160634073 + AluSq SINE Alu 1 297 -16 22 0 0 0 chr5 42451667 42451689 -160633843 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 42451746 42451775 -160633757 + AT_rich Low_complexity Low_complexity 1 29 0 324 200 114 0 chr5 42452059 42452129 -160633403 + MER21B LTR ERV1 497 574 -289 2236 95 10 3 chr5 42452465 42452761 -160632771 - AluSg SINE Alu -12 298 1 2100 134 3 7 chr5 42452801 42453108 -160632424 + AluSx SINE Alu 1 306 -6 707 133 125 17 chr5 42453136 42453256 -160632276 + FLAM_C SINE Alu 6 138 -5 1996 130 7 10 chr5 42453432 42453739 -160631793 - AluSx SINE Alu -6 306 1 2329 81 0 7 chr5 42453748 42454056 -160631476 - AluY SINE Alu -4 307 2 22 0 0 0 chr5 42454530 42454552 -160630980 + AT_rich Low_complexity Low_complexity 1 22 0 518 84 0 0 chr5 42454604 42454675 -160630857 - MER41B LTR ERV1 -84 551 481 2349 77 0 3 chr5 42454686 42454983 -160630549 - AluY SINE Alu -13 298 3 2354 94 3 0 chr5 42455063 42455361 -160630171 - AluSp SINE Alu -14 299 1 25 51 0 0 chr5 42455597 42455636 -160629896 + AT_rich Low_complexity Low_complexity 1 39 0 2928 166 28 18 chr5 42455661 42456204 -160629328 - L1MB3 LINE L1 -77 6106 5559 2145 103 7 7 chr5 42456523 42456815 -160628717 - AluSx SINE Alu -6 306 15 1132 144 23 0 chr5 42456816 42456989 -160628543 - AluSg SINE Alu -133 177 1 2149 97 3 10 chr5 42457001 42457289 -160628243 - AluSg SINE Alu -23 287 2 1316 220 56 16 chr5 42457336 42457380 -160628152 - L1 LINE L1 -2919 3227 3186 2214 112 3 0 chr5 42457380 42457684 -160627848 - AluSg SINE Alu -4 306 2 1316 220 56 16 chr5 42457684 42458028 -160627504 - L1 LINE L1 -2960 3186 2818 1814 171 0 10 chr5 42458028 42458327 -160627205 - AluJb SINE Alu -16 296 1 1316 220 56 16 chr5 42458327 42458369 -160627163 - L1 LINE L1 -3328 2818 2779 1892 117 68 0 chr5 42458370 42458651 -160626881 + AluSg SINE Alu 1 300 -10 796 310 85 48 chr5 42458737 42459172 -160626360 - L2 LINE L2 -1 3312 2862 327 274 39 49 chr5 42459329 42459431 -160626101 - L2 LINE L2 -22 3291 3191 1354 87 71 0 chr5 42459663 42459847 -160625685 - MER107 DNA MER1_type 0 197 1 36 0 0 0 chr5 42460121 42460157 -160625375 + AT_rich Low_complexity Low_complexity 1 36 0 1659 191 14 0 chr5 42460162 42460444 -160625088 - AluJo SINE Alu -26 286 1 23 0 0 0 chr5 42460590 42460613 -160624919 + AT_rich Low_complexity Low_complexity 1 23 0 330 115 0 0 chr5 42460865 42460917 -160624615 + (GAA)n Simple_repeat Simple_repeat 1 52 0 1055 136 12 6 chr5 42461029 42461191 -160624341 + AluSc SINE Alu 135 297 -12 1651 155 32 7 chr5 42461207 42461485 -160624047 + AluJo SINE Alu 1 285 -27 1187 110 6 6 chr5 42461668 42461832 -160623700 + AluSp SINE Alu 137 300 -13 2242 81 20 14 chr5 42462058 42462353 -160623179 + AluSc SINE Alu 1 297 -12 2379 67 10 3 chr5 42462433 42462730 -160622802 - AluY SINE Alu -12 299 1 344 244 11 22 chr5 42462731 42462821 -160622711 - MER97a DNA MER1_type? -24 870 782 1621 133 92 19 chr5 42463205 42463342 -160622190 + AluSx SINE Alu 1 126 -186 2445 70 0 0 chr5 42463342 42463641 -160621891 + AluY SINE Alu 1 299 -12 1621 133 92 19 chr5 42463641 42463774 -160621758 + AluSx SINE Alu 126 291 -21 1679 197 114 49 chr5 42464000 42464259 -160621273 - MER97c DNA MER1_type? -520 570 329 2170 105 0 3 chr5 42464259 42464579 -160620953 - AluSx SINE Alu 0 319 1 1679 197 114 49 chr5 42464579 42464811 -160620721 - MER97c DNA MER1_type? -761 329 46 786 236 28 11 chr5 42464912 42465090 -160620442 + MLT1B LTR MaLR 210 390 0 1725 151 16 40 chr5 42465349 42465653 -160619879 - AluJo SINE Alu -15 297 1 2399 86 0 7 chr5 42465662 42465963 -160619569 - AluSx SINE Alu -13 299 1 711 200 31 8 chr5 42465972 42466102 -160619430 - AluJo SINE Alu -178 134 2 3530 166 50 15 chr5 42466140 42466639 -160618893 - L1MA5 LINE L1 -2 6298 5767 315 0 0 0 chr5 42466639 42466674 -160618858 + (TG)n Simple_repeat Simple_repeat 2 36 0 3530 166 50 15 chr5 42466674 42466847 -160618685 - L1MA5 LINE L1 -533 5767 5602 1762 192 41 28 chr5 42466854 42467244 -160618288 - L1MA4 LINE L1 -11 6289 5895 279 133 0 0 chr5 42467244 42467289 -160618243 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 2110 129 0 3 chr5 42467290 42467593 -160617939 - AluSx SINE Alu -10 302 1 197 371 26 17 chr5 42467691 42467807 -160617725 + L2 LINE L2 2601 2717 -597 1446 181 16 80 chr5 42468072 42468386 -160617146 - AluJo SINE Alu -18 294 1 236 259 42 121 chr5 42468391 42468557 -160616975 - MER5B DNA MER1_type -1 177 25 27 29 0 0 chr5 42469043 42469077 -160616455 + AT_rich Low_complexity Low_complexity 1 34 0 462 259 30 15 chr5 42469132 42469263 -160616269 + L1ME4a LINE L1 5588 5720 -401 332 321 43 14 chr5 42469430 42469570 -160615962 + L1ME4a LINE L1 5711 5854 -267 1181 141 0 0 chr5 42469682 42469859 -160615673 - AluSp SINE Alu 0 313 137 1735 189 14 3 chr5 42470109 42470400 -160615132 + AluJb SINE Alu 1 294 -18 467 260 100 35 chr5 42470524 42470724 -160614808 + L2 LINE L2 2440 2652 -662 765 230 113 25 chr5 42470780 42471019 -160614513 + MIR SINE MIR 2 261 -1 541 106 35 47 chr5 42471423 42471508 -160614024 + FRAM SINE Alu 67 150 -26 1629 160 20 33 chr5 42471582 42471882 -160613650 + AluSx SINE Alu 1 296 -16 800 156 0 8 chr5 42472041 42472163 -160613369 - FLAM_C SINE Alu -11 132 12 707 273 64 26 chr5 42472267 42472531 -160613001 - MLT1J LTR MaLR 0 511 238 2077 122 0 20 chr5 42472535 42472838 -160612694 + AluSx SINE Alu 1 297 -15 2371 87 3 0 chr5 42473285 42473584 -160611948 - AluSq SINE Alu -13 300 1 2210 103 0 3 chr5 42473851 42474151 -160611381 - AluSq SINE Alu -14 299 1 1192 171 108 87 chr5 42474397 42474684 -160610848 - AluJo SINE Alu -9 293 1 713 220 7 7 chr5 42475465 42475606 -160609926 - FLAM_C SINE Alu -2 141 1 601 243 26 7 chr5 42475607 42475759 -160609773 - L1ME2 LINE L1 -10 6154 6000 2007 142 0 14 chr5 42475789 42476084 -160609448 + AluSx SINE Alu 1 291 -21 36 62 0 0 chr5 42476247 42476311 -160609221 + AT_rich Low_complexity Low_complexity 1 64 0 2219 96 0 3 chr5 42476450 42476759 -160608773 + AluSx SINE Alu 1 308 0 2265 101 0 3 chr5 42477786 42478083 -160607449 + AluSc SINE Alu 1 296 -13 2366 95 7 0 chr5 42478210 42478514 -160607018 + AluSp SINE Alu 2 307 -6 1127 282 126 18 chr5 42478515 42479042 -160606490 + L2 LINE L2 2707 3312 -1 6388 57 32 50 chr5 42479127 42480912 -160604620 - SVA Other Other -589 1386 1 1950 139 24 0 chr5 42480927 42481221 -160604311 - AluSx SINE Alu -11 301 1 209 224 82 0 chr5 42481385 42481434 -160604098 - L2 LINE L2 -5 3267 3215 1990 158 0 3 chr5 42481567 42481871 -160603661 - AluJb SINE Alu -9 303 1 1786 159 0 33 chr5 42481887 42482189 -160603343 - AluJo SINE Alu -16 296 5 207 0 0 0 chr5 42482553 42482576 -160602956 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 25 31 0 0 chr5 42482598 42482630 -160602902 + AT_rich Low_complexity Low_complexity 1 32 0 1811 46 14 5 chr5 42482677 42482893 -160602639 - AluY SINE Alu -23 288 71 1993 138 6 16 chr5 42483099 42483410 -160602122 - AluSx SINE Alu -4 308 1 2260 95 3 0 chr5 42483555 42483850 -160601682 - AluSg SINE Alu -14 296 1 2088 115 21 3 chr5 42483878 42484166 -160601366 + AluSx SINE Alu 1 293 -19 817 168 0 0 chr5 42484260 42484385 -160601147 - FLAM_C SINE Alu -8 125 1 795 171 29 14 chr5 42484428 42484568 -160600964 + FLAM_C SINE Alu 2 143 0 1252 213 37 0 chr5 42484778 42485022 -160600510 - AluJo SINE Alu -4 308 56 1766 112 50 8 chr5 42485023 42485282 -160600250 + AluSg SINE Alu 35 304 -6 732 284 49 16 chr5 42485324 42485567 -160599965 - MIR SINE MIR -9 253 3 1813 148 3 56 chr5 42486629 42486805 -160598727 - AluJb SINE Alu -5 307 154 2155 118 0 31 chr5 42486805 42487127 -160598405 - AluSx SINE Alu 0 312 1 1813 148 3 56 chr5 42487127 42487274 -160598258 - AluJb SINE Alu -158 154 1 259 356 8 25 chr5 42487522 42487640 -160597892 - MIR SINE MIR -55 153 38 263 271 0 0 chr5 42487693 42487763 -160597769 + A-rich Low_complexity Low_complexity 1 70 0 2089 123 7 7 chr5 42487899 42488208 -160597324 - AluSg SINE Alu -1 309 1 2322 100 0 0 chr5 42488222 42488523 -160597009 + AluSx SINE Alu 10 310 -2 23 33 0 0 chr5 42488526 42488556 -160596976 + AT_rich Low_complexity Low_complexity 1 30 0 1840 170 3 22 chr5 42488744 42489055 -160596477 - AluJo SINE Alu -7 305 1 1426 259 201 42 chr5 42489168 42489308 -160596224 - L2 LINE L2 -10 3303 3187 1816 167 0 22 chr5 42489308 42489620 -160595912 + AluJb SINE Alu 1 305 -7 1426 259 201 42 chr5 42489620 42490612 -160594920 - L2 LINE L2 -126 3187 1939 415 284 90 7 chr5 42490725 42491023 -160594509 - MLT1H LTR MaLR 0 549 214 1500 181 79 0 chr5 42491139 42491416 -160594116 - AluJb SINE Alu -13 299 1 2493 71 0 0 chr5 42491454 42491763 -160593769 + AluY SINE Alu 1 309 -2 240 259 94 0 chr5 42491767 42491852 -160593680 - L1MCa LINE L1 -4339 2087 1995 1902 97 62 38 chr5 42491940 42492228 -160593304 + AluSq SINE Alu 1 295 -18 532 307 26 0 chr5 42492230 42492383 -160593149 + MLT1J LTR MaLR 106 262 -249 2970 220 72 43 chr5 42492614 42493358 -160592174 - L1ME1 LINE L1 -4 6162 5441 565 246 8 8 chr5 42493358 42493480 -160592052 - FLAM_A SINE Alu -11 122 1 2970 220 72 43 chr5 42493480 42494458 -160591074 - L1ME1 LINE L1 -725 5441 4381 2339 104 3 0 chr5 42494896 42495205 -160590327 - AluSx SINE Alu -1 311 2 1766 150 0 0 chr5 42495233 42495500 -160590032 - AluSx SINE Alu -45 267 1 264 297 158 0 chr5 42495524 42495625 -160589907 + L2 LINE L2 3189 3305 -8 4984 155 17 11 chr5 42495897 42496737 -160588795 - L1MB2 LINE L1 -4 6167 5323 2298 69 0 33 chr5 42496737 42497042 -160588490 - AluSc SINE Alu -14 295 1 975 93 6 80 chr5 42497047 42497209 -160588323 - AluY SINE Alu -161 150 1 517 224 17 58 chr5 42497210 42497384 -160588148 - L1MB2 LINE L1 -816 5330 5164 2006 149 17 0 chr5 42497412 42497707 -160587825 - AluSx SINE Alu -12 300 1 437 200 19 48 chr5 42497832 42497937 -160587595 + MER2 DNA MER2_type 22 123 -222 1869 145 73 28 chr5 42498333 42498691 -160586841 - THE1C LTR MaLR -1 374 1 297 328 17 34 chr5 42500405 42500524 -160585008 - L2 LINE L2 -188 3084 2968 386 248 172 35 chr5 42500580 42500778 -160584754 - MIR SINE MIR -1 261 37 336 269 13 0 chr5 42500910 42500988 -160584544 - L2 LINE L2 -1 3271 3193 293 209 0 15 chr5 42502985 42503052 -160582480 + L1MEc LINE L1 821 886 -5510 774 155 89 78 chr5 42503052 42503257 -160582275 + Charlie1 DNA MER1_type 2488 2699 -62 2197 85 0 3 chr5 42503257 42503564 -160581968 - AluY SINE Alu 0 306 1 774 155 89 78 chr5 42503564 42503628 -160581904 + Charlie1 DNA MER1_type 2699 2761 0 281 281 119 24 chr5 42553838 42554048 -160531484 - MSTA LTR MaLR -180 248 19 1293 186 13 108 chr5 42554184 42554331 -160531201 - L1 LINE L1 -2429 3717 3558 2703 109 0 0 chr5 42554331 42554716 -160530816 - L1PA12 LINE L1 -18 6150 5766 1293 186 13 108 chr5 42554716 42555030 -160530502 - L1 LINE L1 -2588 3558 3300 734 242 21 52 chr5 42555074 42555401 -160530131 - L1MB2 LINE L1 -1083 5063 4747 215 244 39 26 chr5 42558150 42558228 -160527304 + CT-rich Low_complexity Low_complexity 2 80 0 588 103 22 71 chr5 42558230 42558414 -160527118 + (TTCCC)n Simple_repeat Simple_repeat 2 176 0 24 0 0 0 chr5 42558532 42558556 -160526976 + AT_rich Low_complexity Low_complexity 1 24 0 2056 160 0 0 chr5 42558673 42558985 -160526547 - AluSx SINE Alu 0 312 1 1562 285 76 16 chr5 42559070 42559624 -160525908 + L2 LINE L2 1924 2510 -804 1782 172 28 23 chr5 42559645 42559979 -160525553 - L1MC/D LINE L1 -2066 5719 5381 2231 121 0 0 chr5 42559979 42560277 -160525255 - AluSx SINE Alu -14 298 1 1782 172 28 23 chr5 42560277 42560332 -160525200 - L1MC/D LINE L1 -2404 5381 5328 24 0 0 0 chr5 42560386 42560410 -160525122 + AT_rich Low_complexity Low_complexity 1 24 0 378 0 0 0 chr5 42560451 42560493 -160525039 + (TC)n Simple_repeat Simple_repeat 1 42 0 1220 150 68 5 chr5 42560497 42560704 -160524828 - AluJb SINE Alu -80 232 13 269 212 121 20 chr5 42560704 42560803 -160524729 - L1MC/D LINE L1 -932 5214 5106 5529 170 92 19 chr5 42560819 42561580 -160523952 - L1PB3 LINE L1 -7 6147 5443 2371 81 0 40 chr5 42561580 42561902 -160523630 - AluSq SINE Alu -4 309 1 5529 170 92 19 chr5 42561902 42562266 -160523266 - L1PB3 LINE L1 -711 5443 5107 1202 129 144 0 chr5 42562266 42562467 -160523065 + MER30 DNA MER1_type 1 230 0 5529 170 92 19 chr5 42562467 42563469 -160522063 - L1PB3 LINE L1 -1047 5107 3832 2099 180 70 5 chr5 42563469 42563869 -160521663 - MSTA LTR MaLR -2 426 1 5529 170 92 19 chr5 42563869 42563957 -160521575 - L1PB3 LINE L1 -2322 3832 3752 2519 251 106 43 chr5 42564533 42564659 -160520873 - L1MB2 LINE L1 -1419 4727 4610 1704 180 29 3 chr5 42564659 42565003 -160520529 - L1MA4A LINE L1 -7 6296 5944 2519 251 106 43 chr5 42565003 42565559 -160519973 - L1MB2 LINE L1 -1536 4610 4090 1429 169 130 32 chr5 42565559 42565897 -160519635 + MLT1A2 LTR MaLR 4 374 0 2519 251 106 43 chr5 42565897 42566592 -160518940 - L1MB2 LINE L1 -2056 4090 3217 673 198 209 4 chr5 42566606 42566869 -160518663 - L1MB2 LINE L1 -3050 3096 2780 481 177 0 0 chr5 42566879 42566958 -160518574 - AluJ/FLAM SINE Alu -233 79 1 352 218 45 18 chr5 42566964 42567074 -160518458 - L1MB2 LINE L1 -3357 2789 2677 186 342 40 53 chr5 42567074 42567226 -160518306 + L2 LINE L2 2552 2701 -613 1000 193 5 25 chr5 42567295 42567492 -160518040 + AluJo SINE Alu 85 277 -35 254 248 26 43 chr5 42567541 42567658 -160517874 - L1MC4 LINE L1 -2 8040 7926 214 184 0 0 chr5 42567742 42567780 -160517752 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4451 235 88 16 chr5 42567780 42567901 -160517631 - L1MC4 LINE L1 -128 7914 7803 736 188 0 8 chr5 42567901 42568029 -160517503 - FLAM_A SINE Alu -5 128 2 4451 235 88 16 chr5 42568029 42569369 -160516163 - L1MC4 LINE L1 -239 7803 6348 826 255 89 64 chr5 42569381 42569660 -160515872 - MLT1C LTR MaLR 0 467 196 1928 151 14 0 chr5 42569660 42569951 -160515581 - AluJb SINE Alu -17 295 1 826 255 89 64 chr5 42569951 42570016 -160515516 - MLT1C LTR MaLR -271 196 134 1854 163 0 10 chr5 42570016 42570317 -160515215 - AluJb SINE Alu -14 298 1 826 255 89 64 chr5 42570317 42570422 -160515110 - MLT1C LTR MaLR -333 134 6 409 221 107 0 chr5 42570466 42570597 -160514935 - L1MC4a LINE L1 -1541 6267 6123 427 358 40 5 chr5 42570684 42570955 -160514577 - L2 LINE L2 -244 3069 2791 3345 62 25 0 chr5 42570955 42571388 -160514144 - MLT2A1 LTR ERVL 0 444 1 1386 235 3 20 chr5 42571453 42571747 -160513785 - AluJo SINE Alu -18 294 6 237 159 0 0 chr5 42571769 42571813 -160513719 + (TA)n Simple_repeat Simple_repeat 1 44 0 1908 107 17 14 chr5 42571813 42572104 -160513428 - L1PA11 LINE L1 -2 6172 5881 514 279 96 122 chr5 42572107 42572171 -160513361 - L2 LINE L2 -605 2709 2645 2159 122 3 3 chr5 42572171 42572474 -160513058 + AluJb SINE Alu 5 307 -5 514 279 96 122 chr5 42572474 42572868 -160512664 - L2 LINE L2 -669 2645 2263 183 273 15 76 chr5 42573687 42573753 -160511779 - L2 LINE L2 -21 3251 3190 182 36 0 36 chr5 42574138 42574158 -160511374 + (TA)n Simple_repeat Simple_repeat 2 22 -6 2200 118 3 3 chr5 42574158 42574454 -160511078 - AluSx SINE Alu -16 296 1 182 36 0 36 chr5 42574454 42574461 -160511071 + (TA)n Simple_repeat Simple_repeat 22 28 0 2304 111 3 0 chr5 42574802 42575099 -160510433 - AluSq SINE Alu -15 298 1 973 95 82 0 chr5 42575113 42575271 -160510261 - L1MA2 LINE L1 0 6304 6134 246 70 70 0 chr5 42575276 42575333 -160510199 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 2066 158 0 0 chr5 42575336 42575647 -160509885 - AluSq SINE Alu -2 311 1 2714 133 9 4 chr5 42575647 42576113 -160509419 - L1MA1 LINE L1 -156 6146 5679 6011 98 37 29 chr5 42576114 42577053 -160508479 - SVA Other Other 0 1386 440 437 242 39 55 chr5 42577268 42577396 -160508136 + MIR3 SINE MIR 68 193 -15 2510 97 27 16 chr5 42577669 42578040 -160507492 + THE1C LTR MaLR 1 375 0 3592 185 102 13 chr5 42578066 42578969 -160506563 + L1MC4a LINE L1 6824 7806 -2 1944 104 63 0 chr5 42578977 42579297 -160506235 + AluSx SINE Alu 1 337 0 389 306 122 36 chr5 42579707 42579903 -160505629 + LTR67 LTR ERVL 109 321 -236 495 245 179 66 chr5 42580234 42580446 -160505086 + MIR SINE MIR 2 237 -25 234 0 0 0 chr5 42581437 42581463 -160504069 + (TTG)n Simple_repeat Simple_repeat 2 27 0 829 293 70 4 chr5 42581763 42582005 -160503527 - MIR SINE MIR 0 262 5 22 0 0 0 chr5 42582061 42582083 -160503449 + AT_rich Low_complexity Low_complexity 1 22 0 1621 145 40 25 chr5 42583047 42583323 -160502209 - AluSx SINE Alu -32 280 1 2303 118 0 0 chr5 42583330 42583634 -160501898 - AluSx SINE Alu -8 304 1 1066 97 13 0 chr5 42584320 42584475 -160501057 - L1MA3 LINE L1 0 7724 7568 14622 152 28 18 chr5 42584481 42589782 -160495750 - L1MA3 LINE L1 -717 7007 1652 835 159 111 53 chr5 42589782 42589989 -160495543 - THE1B LTR MaLR -145 219 1 200 220 68 51 chr5 42590177 42590236 -160495296 + L2 LINE L2 3199 3258 -55 205 253 33 113 chr5 42591467 42591617 -160493915 + MIR SINE MIR 84 221 -41 29890 98 9 29 chr5 42592078 42598567 -160486965 - L1PA7 LINE L1 -2 6467 1 197 352 125 16 chr5 42598861 42598989 -160486543 + L2 LINE L2 2799 2940 -374 1469 186 89 24 chr5 42598990 42599130 -160486402 - Tigger2a DNA MER2_type -2314 394 265 229 48 71 0 chr5 42599130 42599172 -160486360 + (TAAAG)n Simple_repeat Simple_repeat 3 47 0 1469 186 89 24 chr5 42599172 42599401 -160486131 - Tigger2a DNA MER2_type -2443 265 1 437 325 26 21 chr5 42599532 42599723 -160485809 + L2 LINE L2 2891 3082 -190 1943 216 79 65 chr5 42600506 42600677 -160484855 - L1M4 LINE L1 -2970 3176 3009 1497 181 53 58 chr5 42600677 42601053 -160484479 - MLT1A2 LTR MaLR 0 374 1 1943 216 79 65 chr5 42601053 42601876 -160483656 - L1M4 LINE L1 -3137 3009 2168 365 237 114 23 chr5 42601899 42601910 -160483622 - MER3 DNA MER1_type -30 179 170 1294 196 92 6 chr5 42601910 42602227 -160483305 - MER2 DNA MER2_type 0 344 1 365 237 114 23 chr5 42602227 42602346 -160483186 - MER3 DNA MER1_type -39 170 37 2652 160 41 105 chr5 42602574 42603280 -160482252 - LTR8 LTR ERV1 -30 661 1 270 203 101 0 chr5 42603706 42603775 -160481757 - Charlie8 DNA MER1_type -2217 200 125 280 311 87 0 chr5 42604051 42604154 -160481378 + L2 LINE L2 3190 3301 -12 408 356 40 28 chr5 42605229 42605482 -160480050 + L2 LINE L2 2600 2855 -459 353 257 83 42 chr5 42605777 42605921 -160479611 + L2 LINE L2 3123 3272 0 941 274 24 8 chr5 42607864 42608119 -160477413 + MIR SINE MIR 4 262 0 282 251 52 11 chr5 42608373 42608480 -160477052 + MIR SINE MIR 94 203 -59 1024 206 5 15 chr5 42608684 42608883 -160476649 + MER58A DNA MER1_type 24 220 -4 234 0 0 0 chr5 42608956 42608982 -160476550 + (A)n Simple_repeat Simple_repeat 1 26 0 305 170 134 98 chr5 42608984 42609096 -160476436 + MER103 DNA DNA 2 117 -49 237 83 0 0 chr5 42609169 42609205 -160476327 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 190 286 36 0 chr5 42610142 42610198 -160475334 + L2 LINE L2 3211 3268 -4 200 206 0 0 chr5 42610444 42610478 -160475054 + polypurine Low_complexity Low_complexity 3 36 0 23 33 0 0 chr5 42610495 42610525 -160475007 + AT_rich Low_complexity Low_complexity 1 30 0 653 146 0 9 chr5 42610527 42610637 -160474895 - FRAM SINE Alu -16 160 52 691 229 29 0 chr5 42610706 42610881 -160474651 - LTR16B LTR ERVL 0 464 285 2060 186 16 21 chr5 42610881 42611306 -160474226 + L1MB8 LINE L1 5744 6166 -12 418 83 56 0 chr5 42611510 42611582 -160473950 - SVA Other Other -877 509 434 1344 124 0 0 chr5 42611583 42611777 -160473755 - L1M1 LINE L1 -612 5692 5499 25 31 0 0 chr5 42612238 42612270 -160473262 + AT_rich Low_complexity Low_complexity 1 32 0 246 352 55 10 chr5 42612406 42612716 -160472816 + L1M4 LINE L1 3762 4085 -2061 22 35 0 0 chr5 42613155 42613184 -160472348 + AT_rich Low_complexity Low_complexity 1 29 0 5026 107 30 16 chr5 42613188 42613547 -160471985 - L1PB1 LINE L1 -1 6866 6513 354 23 0 0 chr5 42613547 42613590 -160471942 + (CA)n Simple_repeat Simple_repeat 2 44 0 5026 107 30 16 chr5 42613590 42614032 -160471500 - L1PB1 LINE L1 -354 6513 6054 2160 132 3 0 chr5 42614034 42614338 -160471194 + AluY SINE Alu 1 305 -6 41618 62 3 1 chr5 42614348 42620482 -160465050 + L1PA5 LINE L1 11 6150 -4 12878 172 58 41 chr5 42620482 42625158 -160460374 - L1PB1 LINE L1 -804 6058 1464 749 149 33 0 chr5 42625158 42625279 -160460253 + AluSq/x SINE Alu 1 125 -188 12878 172 58 41 chr5 42625279 42625302 -160460230 - L1PB1 LINE L1 -5398 1464 1443 405 0 0 0 chr5 42625302 42625347 -160460185 + (CCA)n Simple_repeat Simple_repeat 3 47 0 12878 172 58 41 chr5 42625347 42625811 -160459721 - L1PB1 LINE L1 -5419 1443 625 539 198 9 0 chr5 42625803 42625914 -160459618 - L1PB1 LINE L1 -6663 200 89 * 575 131 0 0 chr5 42625909 42625993 -160459539 + L1PBa LINE L1 1391 1474 -5389 521 134 0 0 chr5 42626020 42626102 -160459430 - L1PB1 LINE L1 -6779 84 3 2005 93 68 4 chr5 42626344 42626623 -160458909 - AluSx SINE Alu -15 297 1 514 291 80 99 chr5 42626872 42627284 -160458248 - L2 LINE L2 -91 3222 2819 33 0 0 0 chr5 42627378 42627411 -160458121 + AT_rich Low_complexity Low_complexity 1 33 0 376 241 99 94 chr5 42627527 42627739 -160457793 - MIR SINE MIR -1 261 49 872 164 184 10 chr5 42628249 42628450 -160457082 - MER46A DNA MER2_type 0 236 1 298 280 74 51 chr5 42628459 42628809 -160456723 - L1M4 LINE L1 -2192 3954 3597 1626 150 67 35 chr5 42631147 42631461 -160454071 + MLT1B LTR MaLR 65 388 -2 2293 96 0 3 chr5 42632229 42632530 -160453002 - AluSc SINE Alu -9 300 1 21 82 0 0 chr5 42632730 42632779 -160452753 + AT_rich Low_complexity Low_complexity 1 49 0 2193 101 0 19 chr5 42634158 42634474 -160451058 - AluSg SINE Alu 0 310 1 1440 258 109 34 chr5 42634718 42635221 -160450311 + MLT1H LTR MaLR 9 549 0 2074 115 0 14 chr5 42635667 42635963 -160449569 - AluSx SINE Alu -18 294 3 24 0 0 0 chr5 42636371 42636395 -160449137 + AT_rich Low_complexity Low_complexity 1 24 0 202 319 231 0 chr5 42636447 42636629 -160448903 + MIR SINE MIR 4 227 -35 23 33 0 0 chr5 42637308 42637338 -160448194 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr5 42637390 42637415 -160448117 + AT_rich Low_complexity Low_complexity 1 25 0 2023 113 40 7 chr5 42637416 42637716 -160447816 - AluSx SINE Alu -2 310 1 2199 103 7 0 chr5 42638532 42638824 -160446708 + AluSx SINE Alu 3 296 -16 8414 136 9 13 chr5 42639390 42641751 -160443781 - L1MA2 LINE L1 0 7723 5368 1698 190 3 10 chr5 42641751 42642056 -160443476 - AluSx SINE Alu -7 305 3 8414 136 9 13 chr5 42642056 42642152 -160443380 - L1MA2 LINE L1 -2355 5368 5273 1281 244 0 0 chr5 42642151 42642434 -160443098 - L1MA2 LINE L1 -3282 4283 4001 * 2626 135 39 36 chr5 42642438 42642916 -160442616 - L1MA2 LINE L1 -3806 3759 3284 2017 98 3 52 chr5 42642916 42643241 -160442291 + AluSp SINE Alu 1 309 -4 2626 135 39 36 chr5 42643241 42643345 -160442187 - L1MA2 LINE L1 -4281 3284 3171 2162 119 3 3 chr5 42643345 42643640 -160441892 + AluSg SINE Alu 1 295 -15 2626 135 39 36 chr5 42643640 42643666 -160441866 - L1MA2 LINE L1 -4394 3171 3147 2293 102 3 0 chr5 42643666 42643969 -160441563 - AluSx SINE Alu -8 304 1 264 299 112 0 chr5 42644003 42644110 -160441422 + MIR SINE MIR 131 249 -13 272 322 44 0 chr5 42644214 42644304 -160441228 + MIR3 SINE MIR 67 160 -48 251 263 75 12 chr5 42645138 42645218 -160440314 - MIR SINE MIR -88 120 36 365 241 161 0 chr5 42645361 42645473 -160440059 - MER112 DNA MER1_type -66 194 65 961 229 126 0 chr5 42645627 42645858 -160439674 + MIR SINE MIR 3 262 0 203 340 57 28 chr5 42646311 42646417 -160439115 - L2 LINE L2 -209 3063 2955 411 137 0 0 chr5 42646533 42646606 -160438926 + (CA)n Simple_repeat Simple_repeat 2 74 0 936 195 6 0 chr5 42646606 42646765 -160438767 - FAM SINE Alu -11 164 5 2104 127 0 0 chr5 42647606 42647918 -160437614 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 42649119 42649147 -160436385 + AT_rich Low_complexity Low_complexity 1 28 0 281 200 59 47 chr5 42649336 42649421 -160436111 - MIR SINE MIR -2 260 175 31 0 0 0 chr5 42649728 42649759 -160435773 + AT_rich Low_complexity Low_complexity 1 31 0 1608 183 7 33 chr5 42650225 42650525 -160435007 - AluJb SINE Alu -20 292 1 2050 141 0 6 chr5 42650819 42651131 -160434401 - AluSg SINE Alu 0 310 1 240 363 0 10 chr5 42651241 42651343 -160434189 + CT-rich Low_complexity Low_complexity 4 104 0 2258 104 0 0 chr5 42651464 42651762 -160433770 + AluSq SINE Alu 1 298 -15 897 177 6 13 chr5 42652710 42652868 -160432664 - FRAM SINE Alu -11 165 9 2041 139 7 7 chr5 42653976 42654279 -160431253 + AluSx SINE Alu 1 303 -9 6652 66 9 41 chr5 42654347 42655328 -160430204 - SVA Other Other -4 1382 433 5922 64 20 15 chr5 42655345 42656380 -160429152 - SVA Other Other -520 866 1 203 29 88 0 chr5 42656380 42656414 -160429118 + GA-rich Low_complexity Low_complexity 5 41 0 1138 151 34 5 chr5 42657754 42657960 -160427572 - L1MB7 LINE L1 -10 6174 5963 1077 229 90 86 chr5 42660530 42661076 -160424456 + MLT1H LTR MaLR 2 549 0 270 349 154 38 chr5 42661474 42661818 -160423714 - L2 LINE L2 -84 3188 2805 1308 336 92 11 chr5 42661835 42662555 -160422977 - L2 LINE L2 -629 2685 1908 276 294 71 116 chr5 42662562 42662916 -160422616 + L2 LINE L2 2925 3262 -10 565 266 7 0 chr5 42664246 42664400 -160421132 - L1PB4 LINE L1 -2 6154 6000 293 330 165 37 chr5 42664403 42664876 -160420656 + L2 LINE L2 2471 3026 -246 1028 289 53 44 chr5 42665010 42665183 -160420349 + L2 LINE L2 1570 1740 -1574 2263 36 0 0 chr5 42665183 42665458 -160420074 - L1PA4 LINE L1 -1 6154 5880 1028 289 53 44 chr5 42665458 42665738 -160419794 + L2 LINE L2 1740 2027 -1287 604 289 98 39 chr5 42665783 42666139 -160419393 - LTR16B LTR ERVL -51 413 37 1130 329 72 43 chr5 42666209 42666830 -160418702 + L2 LINE L2 2030 2668 -646 641 247 0 39 chr5 42666800 42666954 -160418578 + L2 LINE L2 3165 3312 -1 * 368 228 0 43 chr5 42667017 42667109 -160418423 + MER21B LTR ERV1 1 88 -775 2395 223 121 15 chr5 42667125 42667811 -160417721 + MER21B LTR ERV1 48 806 -57 532 118 9 27 chr5 42667830 42667940 -160417592 + (TTCC)n Simple_repeat Simple_repeat 1 108 0 317 322 203 10 chr5 42667944 42668239 -160417293 + L2 LINE L2 2722 3067 -246 22 35 0 0 chr5 42668631 42668660 -160416872 + AT_rich Low_complexity Low_complexity 1 29 0 220 317 37 12 chr5 42668858 42668940 -160416592 - L2 LINE L2 -4 3268 3185 1242 166 32 14 chr5 42669058 42669275 -160416257 + AluJo SINE Alu 60 280 -32 236 306 116 16 chr5 42669329 42669450 -160416082 - L2 LINE L2 -243 3070 2938 362 313 68 41 chr5 42669451 42669745 -160415787 - L2 LINE L2 -821 2493 2192 188 365 0 0 chr5 42670504 42670556 -160414976 - L2 LINE L2 -92 3180 3129 335 336 16 8 chr5 42670890 42671012 -160414520 + L2 LINE L2 3149 3271 -1 2538 76 0 0 chr5 42671106 42671409 -160414123 + AluSc SINE Alu 1 303 -6 634 267 169 4 chr5 42673081 42673306 -160412226 - MIR SINE MIR 0 262 1 650 261 121 5 chr5 42674312 42674527 -160411005 + MIR SINE MIR 13 252 -10 2270 88 17 0 chr5 42674948 42675244 -160410288 + AluY SINE Alu 1 301 -10 400 261 155 14 chr5 42675895 42676037 -160409495 + MIR SINE MIR 100 261 -1 2243 110 0 3 chr5 42676801 42677093 -160408439 - AluSg SINE Alu -19 291 1 307 285 88 82 chr5 42678015 42678214 -160407318 + L2 LINE L2 1795 1998 -1316 1995 41 0 4 chr5 42678214 42678459 -160407073 - L1PA7 LINE L1 -2 6152 5909 307 285 88 82 chr5 42678459 42678635 -160406897 + L2 LINE L2 1998 2172 -1142 289 309 139 62 chr5 42678831 42679155 -160406377 + L2 LINE L2 2554 2902 -412 205 352 0 14 chr5 42679433 42679504 -160406028 + L2 LINE L2 3236 3305 -8 852 80 9 0 chr5 42679613 42679725 -160405807 - AluY SINE Alu -32 279 167 251 309 151 60 chr5 42679828 42680126 -160405406 + L2 LINE L2 2578 2902 -412 205 352 0 14 chr5 42680404 42680475 -160405057 + L2 LINE L2 3236 3305 -8 1367 110 19 10 chr5 42680550 42680759 -160404773 - AluSg/x SINE Alu -9 301 91 200 373 0 0 chr5 42681251 42681326 -160404206 + C-rich Low_complexity Low_complexity 1 75 0 1706 188 3 13 chr5 42681348 42681521 -160404011 - AluJo SINE Alu -11 301 131 2272 112 0 10 chr5 42681521 42681834 -160403698 - AluSg SINE Alu 0 310 1 1706 188 3 13 chr5 42681834 42681964 -160403568 - AluJo SINE Alu -181 131 1 378 129 0 0 chr5 42681993 42682055 -160403477 + (CA)n Simple_repeat Simple_repeat 2 63 0 278 222 44 0 chr5 42682056 42682146 -160403386 + (TA)n Simple_repeat Simple_repeat 2 95 0 1535 139 7 78 chr5 42682370 42682664 -160402868 - AluSx SINE Alu -34 278 6 831 248 74 4 chr5 42682948 42683206 -160402326 - L1MB7 LINE L1 -67 6117 5842 869 254 100 31 chr5 42683211 42683570 -160401962 + MLT1D LTR MaLR 5 388 -117 1914 259 64 28 chr5 42683655 42683821 -160401711 + L1M4 LINE L1 3074 3233 -2913 1818 137 12 0 chr5 42683821 42684076 -160401456 + AluSx SINE Alu 1 258 -54 1914 259 64 28 chr5 42684076 42684827 -160400705 + L1M4 LINE L1 3233 4024 -2122 2761 139 32 4 chr5 42684830 42685326 -160400206 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 489 162 368 0 chr5 42685324 42685441 -160400091 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 1821 239 56 41 chr5 42685447 42685651 -160399881 + L1M4 LINE L1 4035 4235 -1911 1519 203 15 7 chr5 42685651 42685922 -160399610 + AluJo SINE Alu 10 282 -30 9913 55 11 2 chr5 42685932 42687977 -160397555 - L1PA6 LINE L1 -7 6147 4085 1821 239 56 41 chr5 42687977 42688443 -160397089 + L1M4 LINE L1 4243 4726 -1420 296 195 54 154 chr5 42688479 42688628 -160396904 + L2 LINE L2 3179 3312 -1 649 261 144 46 chr5 42689156 42689462 -160396070 + MLT1J LTR MaLR 105 440 -71 2471 224 48 25 chr5 42689590 42690355 -160395177 - L1ME1 LINE L1 -127 6039 5257 1113 162 44 59 chr5 42690356 42690628 -160394904 + MSTB1 LTR MaLR 165 432 0 519 195 114 67 chr5 42690657 42690867 -160394665 - L1ME1 LINE L1 -1048 5098 4879 385 229 49 25 chr5 42691107 42691229 -160394303 + MIR SINE MIR 125 249 -13 2180 188 36 50 chr5 42692248 42692377 -160393155 + L1M4 LINE L1 4829 4958 -1226 2145 123 3 3 chr5 42692377 42692678 -160392854 + AluSx SINE Alu 1 301 -11 2180 188 36 50 chr5 42692678 42693012 -160392520 + L1M4 LINE L1 4958 5288 -896 2526 63 0 0 chr5 42693012 42693314 -160392218 + AluY SINE Alu 1 302 -9 2180 188 36 50 chr5 42693314 42693629 -160391903 + L1M4 LINE L1 5288 5606 -578 * 3739 169 29 33 chr5 42693627 42694497 -160391035 - L1 LINE L1 -1839 4307 3442 3389 159 77 34 chr5 42694498 42694521 -160391011 + L1 LINE L1 4337 4358 -1788 3705 61 2 4 chr5 42694521 42694999 -160390533 + L1PA7 LINE L1 5677 6153 -1 3389 159 77 34 chr5 42694999 42695093 -160390439 + L1 LINE L1 4358 4447 -1699 2114 113 6 58 chr5 42695093 42695422 -160390110 + AluSx SINE Alu 1 312 0 3389 159 77 34 chr5 42695422 42695463 -160390069 + L1 LINE L1 4447 4485 -1661 2409 83 7 0 chr5 42695463 42695764 -160389768 + AluSg SINE Alu 1 303 -7 3389 159 77 34 chr5 42695764 42696400 -160389132 + L1 LINE L1 4485 5167 -979 1232 273 92 22 chr5 42696400 42697130 -160388402 - L1MEc LINE L1 -4098 2298 1518 25 0 0 0 chr5 42697691 42697716 -160387816 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 42698210 42698240 -160387292 + AT_rich Low_complexity Low_complexity 1 30 0 396 229 162 0 chr5 42698757 42698862 -160386670 - L2 LINE L2 -2 3311 3190 774 31 0 0 chr5 42699651 42699748 -160385784 + (TCCCC)n Simple_repeat Simple_repeat 5 101 0 1937 140 10 14 chr5 42699748 42700040 -160385492 - AluSx SINE Alu -21 291 1 845 177 65 0 chr5 42700367 42700553 -160384979 - MER3 DNA MER1_type -10 199 2 242 276 0 46 chr5 42700699 42700786 -160384746 - L2 LINE L2 -407 2906 2824 2430 89 0 0 chr5 42700837 42701139 -160384393 - AluSg SINE Alu -8 302 1 1044 262 37 37 chr5 42701142 42701349 -160384183 + L2 LINE L2 2959 3168 -145 1808 175 0 19 chr5 42701349 42701658 -160383874 - AluJo SINE Alu -9 303 1 1044 262 37 37 chr5 42701658 42701805 -160383727 + L2 LINE L2 3167 3313 0 1953 110 84 0 chr5 42702813 42703086 -160382446 + AluSg SINE Alu 5 300 -10 24 0 0 0 chr5 42704582 42704606 -160380926 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 42704930 42704958 -160380574 + AT_rich Low_complexity Low_complexity 1 28 0 419 301 74 0 chr5 42705196 42705359 -160380173 + MIR SINE MIR 81 255 -7 920 233 19 64 chr5 42706030 42706296 -160379236 + HAL1 LINE L1 1 254 -2253 246 336 97 0 chr5 42706304 42706417 -160379115 + HAL1 LINE L1 383 506 -2001 210 171 0 0 chr5 42706460 42706501 -160379031 + (TTG)n Simple_repeat Simple_repeat 1 41 0 790 299 45 14 chr5 42706501 42706722 -160378810 - MIR SINE MIR -12 250 23 1586 179 59 15 chr5 42706724 42706814 -160378718 + MER58B DNA MER1_type 4 89 -2331 2035 169 68 52 chr5 42706814 42707311 -160378221 - MLT1D LTR MaLR 0 505 1 1586 179 59 15 chr5 42707311 42707544 -160377988 + MER58B DNA MER1_type 89 341 0 831 251 82 98 chr5 42707550 42708210 -160377322 + HAL1 LINE L1 793 1441 -1066 1898 129 47 0 chr5 42708930 42709209 -160376323 - AluSx SINE Alu -20 292 1 267 270 153 22 chr5 42709476 42709613 -160375919 + L2 LINE L2 3159 3313 0 877 259 59 39 chr5 42709840 42710095 -160375437 - MIR SINE MIR -2 260 1 630 162 7 15 chr5 42710112 42710248 -160375284 + L1MB8 LINE L1 6044 6178 0 181 200 0 0 chr5 42710500 42710535 -160374997 + L2 LINE L2 3274 3308 -5 1751 138 0 4 chr5 42711182 42711443 -160374089 - AluSx SINE Alu -9 303 44 800 271 87 27 chr5 42711456 42711788 -160373744 - L2 LINE L2 -449 2865 2514 183 42 0 0 chr5 42712557 42712581 -160372951 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 42712704 42712728 -160372804 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 42712733 42712754 -160372778 + (T)n Simple_repeat Simple_repeat 1 21 0 712 114 29 9 chr5 42712800 42712905 -160372627 - U6 snRNA snRNA 0 107 1 457 236 65 96 chr5 42713314 42713543 -160371989 + MER112 DNA MER1_type 32 253 -7 291 247 13 0 chr5 42714006 42714083 -160371449 + MER113 DNA MER1_type? 4 81 -440 689 226 37 0 chr5 42714130 42714294 -160371238 - L1MB5 LINE L1 -9 6165 5996 5091 36 2 2 chr5 42714310 42714951 -160370581 - L1PA4 LINE L1 -757 5389 4749 6498 26 1 0 chr5 42714960 42715722 -160369810 + L1PA4 LINE L1 5393 6155 0 774 240 82 33 chr5 42715732 42716036 -160369496 + MER113 DNA MER1_type? 154 472 -49 222 293 155 26 chr5 42716535 42716651 -160368881 + MIR SINE MIR 118 248 -14 5283 123 40 67 chr5 42716698 42717366 -160368166 - L1MA5A LINE L1 -4 6935 6251 4259 121 19 0 chr5 42717366 42718004 -160367528 - MER39B LTR ERV1 -1 652 3 5283 123 40 67 chr5 42718004 42718337 -160367195 - L1MA5A LINE L1 -688 6251 5961 2129 124 0 13 chr5 42718337 42718644 -160366888 - AluSx SINE Alu -9 303 1 5283 123 40 67 chr5 42718644 42718709 -160366823 - L1MA5A LINE L1 -978 5961 5896 8869 206 32 34 chr5 42718725 42719908 -160365624 - L1MA5A LINE L1 -1793 4995 3812 1614 158 16 63 chr5 42719908 42720224 -160365308 - AluJb SINE Alu -11 301 1 8869 206 32 34 chr5 42720224 42720758 -160364774 - L1MA5A LINE L1 -2976 3812 3279 1647 189 7 0 chr5 42720758 42721038 -160364494 - AluJo SINE Alu -30 282 1 8869 206 32 34 chr5 42721038 42724126 -160361406 - L1MA5A LINE L1 -3509 3279 15 242 250 0 0 chr5 42724267 42724319 -160361213 + (TAA)n Simple_repeat Simple_repeat 1 52 0 753 251 121 9 chr5 42724322 42724545 -160360987 - MIR SINE MIR 0 262 15 6682 135 59 1 chr5 42724894 42726057 -160359475 + Tigger3b DNA MER2_type 1 1231 0 23 68 0 0 chr5 42726206 42726250 -160359282 + AT_rich Low_complexity Low_complexity 1 44 0 2372 103 0 0 chr5 42726873 42727184 -160358348 + AluY SINE Alu 1 311 0 340 225 225 38 chr5 42780459 42780619 -160304913 + MIR3 SINE MIR 8 197 -11 275 311 111 11 chr5 42783549 42783639 -160301893 - L2 LINE L2 -31 3241 3143 1819 186 0 0 chr5 42784801 42785107 -160300425 - AluJo SINE Alu -6 306 1 5331 202 98 56 chr5 42785126 42785299 -160300233 - L1MC4a LINE L1 0 7808 7644 2151 146 0 0 chr5 42785299 42785607 -160299925 + AluSx SINE Alu 3 310 -2 5331 202 98 56 chr5 42785607 42787262 -160298270 - L1MC4a LINE L1 -164 7644 5903 309 262 10 12 chr5 42787646 42787926 -160297606 - L1ME2 LINE L1 -229 5935 5654 502 293 118 7 chr5 42788117 42788387 -160297145 - LTR16C LTR ERVL -2 489 190 438 315 38 25 chr5 42789488 42789726 -160295806 - L1MC4a LINE L1 -1894 5914 5674 258 192 125 85 chr5 42789749 42790048 -160295484 - L1MC4a LINE L1 -789 5357 5176 1022 237 217 15 chr5 42790250 42790646 -160294886 - MLT1D LTR MaLR -29 476 1 249 330 40 0 chr5 42790682 42790855 -160294677 - L1MC4a LINE L1 -1217 4929 4750 479 295 70 61 chr5 42790955 42791297 -160294235 - L1MC4a LINE L1 -1546 4600 4256 304 229 57 9 chr5 42791349 42791454 -160294078 - L1MC4a LINE L1 -1952 4194 4085 274 231 26 0 chr5 42791487 42791565 -160293967 - MER116 DNA Mariner 0 80 1 534 190 145 169 chr5 42791630 42791961 -160293571 - L2 LINE L2 0 3313 2991 333 100 0 0 chr5 42791963 42792013 -160293519 + (G)n Simple_repeat Simple_repeat 1 50 0 316 346 44 11 chr5 42792183 42792365 -160293167 - L1MC4a LINE L1 -2230 3916 3729 194 280 20 0 chr5 42792759 42792809 -160292723 - MIR SINE MIR -102 160 110 195 42 0 0 chr5 42794006 42794030 -160291502 + (T)n Simple_repeat Simple_repeat 1 24 0 333 331 15 15 chr5 42794036 42794166 -160291366 + MER5A DNA MER1_type 50 179 -10 973 219 73 5 chr5 42794521 42794740 -160290792 - MIR SINE MIR 0 262 29 297 309 147 22 chr5 42794850 42794986 -160290546 + MIR3 SINE MIR 5 157 -51 21 0 0 0 chr5 42795413 42795434 -160290098 + AT_rich Low_complexity Low_complexity 1 21 0 1629 59 0 18 chr5 42797032 42797251 -160288281 - L1PA7 LINE L1 0 6154 5940 647 155 295 14 chr5 42798307 42798514 -160287018 + MER5C DNA MER1_type 57 321 -3 26 0 0 0 chr5 42798626 42798652 -160286880 + AT_rich Low_complexity Low_complexity 1 26 0 4256 165 62 15 chr5 42798656 42798798 -160286734 - L1MB2 LINE L1 -6 6165 6031 2253 126 21 12 chr5 42798798 42799132 -160286400 - MER1B DNA MER1_type 0 337 1 4256 165 62 15 chr5 42799132 42800196 -160285336 - L1MB2 LINE L1 -140 6031 4904 16087 109 18 182 chr5 42800390 42801605 -160283927 + L1PA8A LINE L1 4 1415 -5031 180 77 0 0 chr5 42801605 42801631 -160283901 + (CAA)n Simple_repeat Simple_repeat 2 27 0 16087 109 18 182 chr5 42801631 42808122 -160277410 + L1PA8A LINE L1 1415 6433 -13 692 169 79 29 chr5 42808545 42808724 -160276808 - L1ME2 LINE L1 0 6334 6003 1830 162 7 7 chr5 42808810 42809100 -160276432 + AluJo SINE Alu 1 290 -22 2321 113 90 3 chr5 42809103 42809438 -160276094 + THE1B LTR MaLR 1 364 0 580 278 105 60 chr5 42811627 42811875 -160273657 + MIR SINE MIR 1 259 -3 660 261 54 14 chr5 42812476 42812685 -160272847 - MIR SINE MIR -3 259 44 233 364 117 28 chr5 42813311 42813808 -160271724 + L2 LINE L2 2420 2960 -354 2745 23 0 0 chr5 42815520 42815822 -160269710 + AluY SINE Alu 3 304 -7 1723 245 74 17 chr5 42815843 42816304 -160269228 + MLT1G1 LTR MaLR 109 595 0 261 241 203 53 chr5 42816358 42816734 -160268798 - L1MC4a LINE L1 -111 6010 5578 2211 152 48 0 chr5 42816846 42817221 -160268311 - MER57A LTR ERV1 -9 394 2 1117 153 0 0 chr5 42817222 42817392 -160268140 - MER57A-int LTR ERV1 0 7537 7368 225 132 26 0 chr5 42817392 42817430 -160268102 - LTR54B LTR ERV1 -226 272 234 421 71 18 0 chr5 42817430 42817486 -160268046 - MER57A-int LTR ERV1 -202 7335 7279 805 101 23 23 chr5 42817486 42817615 -160267917 - LTR54B LTR ERV1 -367 131 3 17496 125 32 55 chr5 42817615 42817716 -160267816 - MER57A-int LTR ERV1 -391 7146 7044 2128 78 34 20 chr5 42817716 42818009 -160267523 + AluSq SINE Alu 1 297 -16 2222 102 0 0 chr5 42818012 42818297 -160267235 - AluSg1 SINE Alu -24 285 1 17496 125 32 55 chr5 42818297 42821444 -160264088 - MER57A-int LTR ERV1 -495 7042 1927 2340 82 10 0 chr5 42821444 42821736 -160263796 + AluSp SINE Alu 1 295 -18 17496 125 32 55 chr5 42821736 42821939 -160263593 - MER57A-int LTR ERV1 -5610 1927 1721 339 234 0 0 chr5 42822040 42822117 -160263415 - MER57A-int LTR ERV1 -2890 3441 3365 555 181 0 0 chr5 42822189 42822283 -160263249 - MER57A-int LTR ERV1 -2991 3340 3247 362 217 89 66 chr5 42822356 42822591 -160262941 - MER57A-int LTR ERV1 -3724 1980 1228 1575 89 5 0 chr5 42822710 42822913 -160262619 - AluSp SINE Alu -11 302 99 257 193 88 0 chr5 42822958 42823015 -160262517 - MER34C LTR ERV1 -369 216 155 2121 138 7 0 chr5 42823020 42823324 -160262208 + AluSx SINE Alu 1 306 -6 5402 137 32 5 chr5 42823575 42824395 -160261137 - MER57A-int LTR ERV1 -6695 842 1 2624 144 18 2 chr5 42824395 42824792 -160260740 - MER57A LTR ERV1 0 403 1 1832 201 14 58 chr5 42824795 42825229 -160260303 + MLT1C LTR MaLR 53 467 0 419 152 0 0 chr5 42825398 42825464 -160260068 + MLT1F1 LTR MaLR 502 567 0 289 312 40 75 chr5 42826164 42826363 -160259169 + MIR SINE MIR 23 214 -48 210 119 70 0 chr5 42827077 42827112 -160258420 + MIR SINE MIR 30 115 -143 2398 112 0 0 chr5 42827294 42827606 -160257926 - AluSx SINE Alu 0 312 1 296 324 18 0 chr5 42828385 42828496 -160257036 - MIR3 SINE MIR -6 202 90 331 260 26 84 chr5 42828758 42828771 -160256761 + MIR SINE MIR 117 129 -133 2270 157 10 54 chr5 42828771 42829179 -160256353 + MLT1B LTR MaLR 1 390 0 331 260 26 84 chr5 42829179 42829319 -160256213 + MIR SINE MIR 129 261 -1 305 304 125 24 chr5 42830813 42830981 -160254551 - MER5A DNA MER1_type -4 185 1 198 218 75 27 chr5 42831275 42831359 -160254173 - MIR SINE MIR -64 144 107 448 246 42 8 chr5 42831856 42831974 -160253558 + MIR SINE MIR 23 144 -64 184 222 0 0 chr5 42832578 42832614 -160252918 + L2 LINE L2 3277 3312 -1 238 181 64 0 chr5 42832827 42832921 -160252611 + (TA)n Simple_repeat Simple_repeat 1 100 0 225 172 111 71 chr5 42832927 42833026 -160252506 - L1MB2 LINE L1 -1 6170 6068 2142 123 3 0 chr5 42833040 42833332 -160252200 - AluSp SINE Alu -20 293 1 22 56 0 0 chr5 42833432 42833468 -160252064 + AT_rich Low_complexity Low_complexity 1 36 0 242 290 0 0 chr5 42833780 42833842 -160251690 - L2 LINE L2 -28 3285 3224 249 314 20 10 chr5 42833914 42834016 -160251516 - L2 LINE L2 -673 2641 2539 2445 84 0 3 chr5 42834016 42834327 -160251205 + AluY SINE Alu 1 310 -1 271 204 0 0 chr5 42834503 42834552 -160250980 + Charlie8 DNA MER1_type 117 165 -2252 31 0 0 0 chr5 42835331 42835362 -160250170 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 42835535 42835556 -160249976 + (GCTG)n Simple_repeat Simple_repeat 1 21 0 208 277 0 0 chr5 42836086 42836133 -160249399 + L2 LINE L2 3133 3179 -93 2748 121 31 5 chr5 42836173 42836561 -160248971 + MER48 LTR ERV1 1 398 0 336 118 289 13 chr5 42836611 42836687 -160248845 + MER4D LTR ERV1 1 97 -775 2014 185 91 37 chr5 42836688 42837152 -160248380 - LTR2B LTR ERV1 0 490 2 45373 100 28 27 chr5 42837152 42842950 -160242582 - Harlequin LTR ERV1 -8 6888 939 1057 105 0 0 chr5 42842950 42843093 -160242439 - AluY SINE Alu -16 295 153 45373 100 28 27 chr5 42843093 42844033 -160241499 - Harlequin LTR ERV1 -5957 939 1 1910 191 75 30 chr5 42844033 42844472 -160241060 - LTR2B LTR ERV1 0 490 32 3636 165 70 57 chr5 42844488 42845289 -160240243 + MER4D LTR ERV1 93 903 0 228 266 180 29 chr5 42845692 42845831 -160239701 - MIR SINE MIR -83 179 20 225 287 178 0 chr5 42846502 42846603 -160238929 + MIR SINE MIR 28 146 -62 352 307 114 76 chr5 42846780 42847269 -160238263 + L2 LINE L2 2470 2976 -337 349 289 0 0 chr5 42847745 42847861 -160237671 - MIR3 SINE MIR -3 205 89 2209 119 0 0 chr5 42847964 42848258 -160237274 - AluSx SINE Alu -18 294 1 260 331 111 22 chr5 42848279 42848460 -160237072 - MIR SINE MIR -64 198 2 354 246 12 35 chr5 42848632 42848733 -160236799 + MIR SINE MIR 5 103 -105 266 130 0 0 chr5 42848739 42848785 -160236747 + Alu SINE Alu 257 302 0 210 253 76 0 chr5 42848854 42848933 -160236599 + MIR SINE MIR 108 192 -70 1521 127 125 30 chr5 42850194 42850492 -160235040 + MSTA LTR MaLR 1 342 -33 1932 122 0 4 chr5 42850492 42850762 -160234770 - AluSx SINE Alu -4 308 40 1521 127 125 30 chr5 42850762 42850800 -160234732 + MSTA LTR MaLR 342 375 0 194 322 129 0 chr5 42851206 42851377 -160234155 + L2 LINE L2 2128 2320 -994 3264 76 62 5 chr5 42851637 42852057 -160233475 + MLT2A1 LTR ERVL 1 444 0 33221 72 8 9 chr5 42852057 42853440 -160232092 + HERVL-A1 LTR ERVL 1 1384 -4270 2309 107 7 0 chr5 42853440 42853749 -160231783 + AluY SINE Alu 1 311 0 33221 72 8 9 chr5 42853749 42856569 -160228963 + HERVL-A1 LTR ERVL 1384 4200 -1454 3288 190 18 16 chr5 42856615 42857024 -160228508 + L1MB5 LINE L1 5549 5961 -213 2357 101 0 0 chr5 42857024 42857322 -160228210 - AluSg SINE Alu -12 298 1 3288 190 18 16 chr5 42857322 42857537 -160227995 + L1MB5 LINE L1 5961 6174 0 883 278 53 35 chr5 42857720 42858058 -160227474 - L2 LINE L2 -85 3228 2885 624 176 46 9 chr5 42858081 42858189 -160227343 + MER45A DNA AcHobo 63 174 -4 1018 240 86 31 chr5 42858224 42858600 -160226932 + MER57A LTR ERV1 1 402 0 669 243 151 0 chr5 42860270 42860422 -160225110 + MER5A DNA MER1_type 9 183 -6 895 199 15 0 chr5 42861103 42861299 -160224233 - L1MD3 LINE L1 -10 7985 7787 1949 108 28 3 chr5 42861299 42861587 -160223945 + AluSx SINE Alu 1 295 -17 2287 138 19 20 chr5 42861624 42861988 -160223544 + MLT1A1 LTR MaLR 1 505 0 2494 177 35 8 chr5 42861993 42862478 -160223054 - L1MC4a LINE L1 -207 7601 7104 249 167 0 0 chr5 42862660 42862714 -160222818 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 1094 261 99 34 chr5 42863065 42863509 -160222023 + MLT1K LTR MaLR 1 473 -3 509 121 0 0 chr5 42863545 42863611 -160221921 + MER1B DNA MER1_type 268 333 0 986 281 36 17 chr5 42864800 42865102 -160220430 + L2 LINE L2 2551 2858 -456 1075 258 49 53 chr5 42865193 42865604 -160219928 - MLT1I LTR MaLR 0 409 1 1916 78 39 11 chr5 42865716 42865999 -160219533 + L1MA2 LINE L1 6014 6304 0 449 192 41 81 chr5 42866288 42866460 -160219072 + MER103 DNA DNA 2 166 0 283 238 86 57 chr5 42866907 42867012 -160218520 + L2 LINE L2 2946 3053 -219 1825 109 0 0 chr5 42867658 42867905 -160217627 - AluSx SINE Alu -39 273 27 574 196 217 22 chr5 42868010 42868240 -160217292 + ORSL DNA AcHobo 1 275 0 786 154 5 135 chr5 42868384 42868592 -160216940 + MER53 DNA DNA 7 187 -2 455 0 18 0 chr5 42869661 42869716 -160215816 + (TG)n Simple_repeat Simple_repeat 2 57 0 360 233 41 99 chr5 42869893 42870065 -160215467 - MER103 DNA DNA -3 163 2 610 274 53 31 chr5 42870613 42870839 -160214693 + L2 LINE L2 3081 3311 -2 1861 148 10 3 chr5 42871896 42872193 -160213339 - AluJo SINE Alu -7 305 7 453 66 0 0 chr5 42873824 42873885 -160211647 + (TCC)n Simple_repeat Simple_repeat 3 63 0 531 280 27 7 chr5 42874834 42874984 -160210548 - MER5A DNA MER1_type -1 188 36 251 27 0 27 chr5 42875928 42875965 -160209567 + (TG)n Simple_repeat Simple_repeat 2 37 0 1107 245 41 41 chr5 42876082 42876425 -160209107 + L2 LINE L2 2569 2911 -403 932 207 29 29 chr5 42876428 42876540 -160208992 - MER20 DNA MER1_type -8 211 97 2553 114 3 14 chr5 42876540 42876908 -160208624 + THE1B LTR MaLR 1 364 0 932 207 29 29 chr5 42876908 42877003 -160208529 - MER20 DNA MER1_type -121 98 4 184 103 0 51 chr5 42877022 42877061 -160208471 + L2 LINE L2 2927 2963 -350 581 285 45 49 chr5 42877129 42877417 -160208115 + L2 LINE L2 2971 3257 -56 2276 94 0 3 chr5 42877779 42878086 -160207446 - AluSq SINE Alu -7 306 1 244 200 15 0 chr5 42878783 42878830 -160206702 - MER53 DNA DNA -3 186 136 1887 117 8 0 chr5 42878830 42879095 -160206437 + L1MC1 LINE L1 6061 6327 -6 244 200 15 0 chr5 42879095 42879112 -160206420 - MER53 DNA DNA -53 136 121 279 297 0 0 chr5 42881061 42881135 -160204397 + (CATA)n Simple_repeat Simple_repeat 2 75 0 387 280 40 8 chr5 42881417 42881549 -160203983 - MIR SINE MIR -62 146 62 298 261 0 72 chr5 42882014 42882125 -160203407 + MIR SINE MIR 29 131 -77 350 267 105 37 chr5 42884432 42884619 -160200913 + MIR SINE MIR 50 253 -9 715 291 55 14 chr5 42884967 42885256 -160200276 + Charlie2 DNA MER1_type 1 301 -2561 1314 272 74 27 chr5 42885278 42885764 -160199768 + L1MC4 LINE L1 7392 7900 -142 530 184 253 13 chr5 42886011 42886169 -160199363 + Charlie2a DNA MER1_type 1468 1663 -1199 494 192 96 8 chr5 42886185 42886310 -160199222 + Charlie2a DNA MER1_type 2724 2859 -3 501 282 92 7 chr5 42886910 42887052 -160198480 + MIR SINE MIR 1 154 -108 209 194 0 0 chr5 42887774 42887810 -160197722 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 480 253 68 19 chr5 42889038 42889200 -160196332 - MIR SINE MIR -54 208 39 494 250 8 16 chr5 42889608 42889732 -160195800 + L2 LINE L2 3187 3309 -4 819 179 28 0 chr5 42891072 42891217 -160194315 + MER5B DNA MER1_type 3 151 -27 232 254 0 17 chr5 42891340 42891399 -160194133 - MIR SINE MIR -157 105 48 23 0 0 0 chr5 42892929 42892952 -160192580 + GC_rich Low_complexity Low_complexity 1 23 0 187 276 207 0 chr5 42893969 42894056 -160191476 + MIR SINE MIR 158 262 0 259 176 78 0 chr5 42900309 42900360 -160185172 - L2 LINE L2 -14 3258 3204 2002 136 0 0 chr5 42901239 42901533 -160183999 + AluSx SINE Alu 9 302 -10 299 182 80 57 chr5 42901534 42901622 -160183910 + MER5B DNA MER1_type 55 144 -34 718 160 56 0 chr5 42903233 42903358 -160182174 - MER58B DNA MER1_type -2 339 208 548 184 0 0 chr5 42903401 42903488 -160182044 - MER58B DNA MER1_type -252 89 3 467 179 32 11 chr5 42903530 42903625 -160181907 - MIR3 SINE MIR -22 186 90 330 26 0 0 chr5 42904165 42904204 -160181328 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2215 112 0 6 chr5 42904218 42904531 -160181001 + AluSx SINE Alu 1 311 -1 754 154 8 0 chr5 42904531 42904648 -160180884 - AluJo/FLAM SINE Alu -184 118 1 188 288 59 59 chr5 42905107 42905225 -160180307 + MIR SINE MIR 17 134 -128 187 218 109 18 chr5 42905588 42905643 -160179889 - MIR SINE MIR -71 191 132 1306 254 23 3 chr5 42906240 42906539 -160178993 + MLT1H LTR MaLR 2 306 -243 234 264 88 48 chr5 42906769 42906894 -160178638 + MARNA DNA Mariner 409 538 -48 1769 151 18 85 chr5 42907513 42907903 -160177629 - L1MA7 LINE L1 0 6291 5928 525 157 24 0 chr5 42909144 42909227 -160176305 - MER58B DNA MER1_type 0 341 257 907 200 47 5 chr5 42909335 42909525 -160176007 - MER58B DNA MER1_type -90 251 54 227 242 17 75 chr5 42909621 42909741 -160175791 + MIR SINE MIR 109 221 -41 887 262 170 54 chr5 42909783 42910070 -160175462 - MLT1L LTR MaLR 0 615 363 2509 59 0 7 chr5 42910070 42910375 -160175157 - AluY SINE Alu -8 303 1 887 262 170 54 chr5 42910375 42910606 -160174926 - MLT1L LTR MaLR -252 363 37 197 246 154 0 chr5 42911460 42911525 -160174007 + L3 LINE CR1 1502 1576 -1 216 158 0 0 chr5 42911629 42911667 -160173865 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 241 324 27 74 chr5 42911817 42911965 -160173567 - L2 LINE L2 -193 3079 2939 581 109 0 10 chr5 42911977 42912078 -160173454 + (TCCA)n Simple_repeat Simple_repeat 3 102 0 329 213 25 82 chr5 42912699 42912821 -160172711 - MIR3 SINE MIR -3 205 91 399 268 167 0 chr5 42912922 42913060 -160172472 + MIR SINE MIR 28 188 -74 405 192 21 62 chr5 42913097 42913217 -160172315 + MLT1H LTR MaLR 92 236 -232 1199 199 119 11 chr5 42913277 42913538 -160171994 - L1ME LINE L1 -442 5722 5434 252 292 11 27 chr5 42914032 42914143 -160171389 + CT-rich Low_complexity Low_complexity 1 109 0 430 209 18 9 chr5 42914443 42914553 -160170979 - L1ME LINE L1 -318 5803 5693 1504 179 21 14 chr5 42914574 42914864 -160170668 + AluJb SINE Alu 1 292 -20 469 301 21 11 chr5 42914873 42915059 -160170473 - L1ME LINE L1 -422 5699 5512 21 71 0 0 chr5 42915080 42915122 -160170410 + AT_rich Low_complexity Low_complexity 1 42 0 836 304 4 39 chr5 42915370 42915650 -160169882 + MLT1I LTR MaLR 3 272 -137 259 246 0 16 chr5 42915863 42915924 -160169608 + MLT1I LTR MaLR 348 407 -2 180 97 0 0 chr5 42916375 42916406 -160169126 + (TG)n Simple_repeat Simple_repeat 1 31 0 378 61 0 0 chr5 42916406 42916455 -160169077 + (GA)n Simple_repeat Simple_repeat 2 50 0 272 281 34 48 chr5 42917249 42917395 -160168137 - MER5A DNA MER1_type 0 189 46 285 188 0 0 chr5 42917731 42917779 -160167753 - L2 LINE L2 -14 3299 3252 365 70 18 0 chr5 42917908 42917965 -160167567 + (TG)n Simple_repeat Simple_repeat 1 58 0 421 248 62 8 chr5 42918097 42918226 -160167306 - L2 LINE L2 0 3313 3178 647 283 63 1 chr5 42919233 42919536 -160165996 - LTR16C LTR ERVL -134 357 3 394 270 18 9 chr5 42919777 42919888 -160165644 - MIR SINE MIR -116 146 35 222 266 109 0 chr5 42919977 42920041 -160165491 - L2 LINE L2 -9 3304 3234 1119 278 75 26 chr5 42920104 42920681 -160164851 - MER115 DNA AcHobo 0 693 75 22 88 0 0 chr5 42921258 42921315 -160164217 + AT_rich Low_complexity Low_complexity 1 57 0 1129 68 6 6 chr5 42921552 42921713 -160163819 + (TCTA)n Simple_repeat Simple_repeat 4 164 0 1738 150 0 51 chr5 42921744 42922057 -160163475 - AluJo SINE Alu -15 297 1 1935 198 16 23 chr5 42922320 42922750 -160162782 - MER63B DNA MER1_type -6 430 4 1081 176 88 15 chr5 42922777 42922981 -160162551 - MER20 DNA MER1_type 0 219 1 260 259 19 0 chr5 42923081 42923135 -160162397 - L2 LINE L2 -67 3205 3151 821 191 124 5 chr5 42923748 42923942 -160161590 - MER20 DNA MER1_type 0 219 3 260 259 19 0 chr5 42924042 42924096 -160161436 - L2 LINE L2 -67 3205 3151 488 264 17 40 chr5 42925200 42925374 -160160158 + MER104 DNA Tc2 7 176 -4 724 281 43 0 chr5 42925441 42925651 -160159881 + MIR SINE MIR 8 226 -36 2369 159 43 26 chr5 42926385 42926806 -160158726 - MSTA LTR MaLR 0 428 1 905 221 24 19 chr5 42927972 42928180 -160157352 + MER63A DNA MER1_type 2 210 0 1312 159 0 10 chr5 42928199 42928407 -160157125 - MER20 DNA MER1_type -2 217 12 2833 93 0 0 chr5 42928536 42928900 -160156632 - THE1B LTR MaLR 0 364 1 206 353 24 0 chr5 42929070 42929155 -160156377 - MIR3 SINE MIR -35 173 87 231 326 109 11 chr5 42931141 42931233 -160154299 + L2 LINE L2 3146 3246 -26 1305 207 31 34 chr5 42931247 42931633 -160153899 - L1ME2 LINE L1 -3 6175 5785 1661 213 37 93 chr5 42931792 42932232 -160153300 + MLT1J LTR MaLR 3 410 -101 2297 98 0 0 chr5 42932232 42932551 -160152981 + AluSx SINE Alu 1 319 0 1661 213 37 93 chr5 42932551 42932648 -160152884 + MLT1J LTR MaLR 410 511 0 21 36 0 0 chr5 42932890 42932918 -160152614 + AT_rich Low_complexity Low_complexity 1 28 0 346 233 17 12 chr5 42933847 42934019 -160151513 + (TA)n Simple_repeat Simple_repeat 1 173 0 606 258 143 14 chr5 42934096 42934313 -160151219 - MIR SINE MIR 0 262 18 481 157 10 10 chr5 42935545 42935647 -160149885 + CT-rich Low_complexity Low_complexity 3 104 0 2027 170 86 105 chr5 42935694 42936266 -160149266 + MLT1E1 LTR MaLR 80 640 -14 241 170 64 0 chr5 42937793 42937840 -160147692 + MIR SINE MIR 117 166 -96 610 266 140 0 chr5 42937875 42938082 -160147450 + MIR SINE MIR 17 252 -10 369 224 252 21 chr5 42938479 42938622 -160146910 + MER5B DNA MER1_type 1 176 -2 258 255 302 7 chr5 42939021 42939170 -160146362 + MIR SINE MIR 4 196 -66 344 243 11 11 chr5 42939222 42939399 -160146133 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 809 296 115 11 chr5 42939533 42939908 -160145624 - MLT2F LTR ERVL -245 418 5 235 175 0 0 chr5 42940937 42940977 -160144555 + MIR SINE MIR 113 152 -56 277 269 108 16 chr5 42941174 42941328 -160144204 + MLT1J2 LTR MaLR 32 234 -303 2224 119 0 3 chr5 42942766 42943060 -160142472 + AluSg SINE Alu 1 293 -17 683 254 71 0 chr5 42943063 42943284 -160142248 + MIR SINE MIR 23 260 -2 386 257 9 18 chr5 42943428 42943537 -160141995 - L2 LINE L2 0 3313 3206 254 259 134 9 chr5 42943539 42943651 -160141881 + L1ME LINE L1 5758 5883 -238 412 243 0 27 chr5 42943891 42944002 -160141530 - L2 LINE L2 0 3313 3206 272 254 127 17 chr5 42944004 42944122 -160141410 + L1ME LINE L1 5758 5888 -233 2389 145 39 12 chr5 42944844 42945259 -160140273 + MSTB LTR MaLR 1 426 0 517 150 286 8 chr5 42945805 42945938 -160139594 + MER97a DNA MER1_type? 10 179 -715 932 105 46 0 chr5 42946459 42946612 -160138920 + MER5A DNA MER1_type 27 186 -3 1486 171 31 49 chr5 42946757 42947043 -160138489 + AluJb SINE Alu 1 281 -31 282 243 153 0 chr5 42947511 42947622 -160137910 + MIR SINE MIR 48 175 -87 536 81 0 81 chr5 42947855 42947942 -160137590 + MADE1 DNA Mariner 1 80 0 1988 188 41 47 chr5 42948437 42948922 -160136610 + MLT1D LTR MaLR 21 502 -3 336 296 0 0 chr5 42949335 42949416 -160136116 + MIR SINE MIR 59 139 -123 1976 141 27 3 chr5 42950514 42950813 -160134719 + AluSx SINE Alu 1 306 -6 23 33 0 0 chr5 42951139 42951169 -160134363 + AT_rich Low_complexity Low_complexity 1 30 0 180 214 0 24 chr5 42951429 42951471 -160134061 - L2 LINE L2 -50 3222 3182 606 181 237 6 chr5 42951594 42951771 -160133761 + MER20 DNA MER1_type 1 218 -1 471 279 22 7 chr5 42951992 42952128 -160133404 + MIR3 SINE MIR 58 195 -13 22 0 0 0 chr5 42952250 42952272 -160133260 + AT_rich Low_complexity Low_complexity 1 22 0 213 273 58 41 chr5 42953494 42953615 -160131917 - L2 LINE L2 -1 3312 3190 644 259 118 72 chr5 42953672 42954197 -160131335 - MLT1H LTR MaLR 0 549 1 21 36 0 0 chr5 42954261 42954289 -160131243 + AT_rich Low_complexity Low_complexity 1 28 0 2145 127 7 0 chr5 42954356 42954647 -160130885 - AluSc SINE Alu -16 293 1 228 35 0 0 chr5 42955476 42955505 -160130027 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 445 201 222 14 chr5 42955546 42955690 -160129842 - MER5B DNA MER1_type -4 174 1 2434 229 87 13 chr5 42957221 42958337 -160127195 - L1MC4 LINE L1 -149 7893 6541 2206 123 3 7 chr5 42958876 42959176 -160126356 + AluSp SINE Alu 3 301 -12 458 168 42 21 chr5 42959206 42959301 -160126231 - L1MC4 LINE L1 -1497 6545 6449 1940 198 46 50 chr5 42959530 42960029 -160125503 + Charlie4a DNA MER1_type 2 498 -10 234 290 14 0 chr5 42960134 42960203 -160125329 + MIR SINE MIR 192 261 -1 369 239 116 99 chr5 42960258 42960542 -160124990 + MLT1H LTR MaLR 209 497 -52 * 1933 175 101 117 chr5 42960519 42961194 -160124338 + MER63C DNA MER1_type 267 930 0 242 309 0 44 chr5 42961230 42961366 -160124166 - LTR16C LTR ERVL -86 405 276 235 296 12 0 chr5 42962425 42962506 -160123026 + MARNA DNA Mariner 277 358 -228 527 271 81 41 chr5 42962524 42962745 -160122787 - MIR SINE MIR -21 241 12 897 252 111 47 chr5 42962777 42963138 -160122394 - L2 LINE L2 -33 3280 2897 1572 134 112 4 chr5 42963139 42963415 -160122117 + AluJo SINE Alu 1 306 -6 1607 175 12 118 chr5 42963431 42963836 -160121696 + MLT1A1 LTR MaLR 1 362 -3 540 244 71 62 chr5 42963855 42964080 -160121452 - L2 LINE L2 -508 2806 2580 789 268 128 62 chr5 42964819 42965124 -160120408 + L2 LINE L2 2385 2737 -577 2130 120 10 10 chr5 42965124 42965423 -160120109 - AluSp SINE Alu -14 299 1 789 268 128 62 chr5 42965423 42965617 -160119915 + L2 LINE L2 2737 2917 -397 353 213 50 0 chr5 42965719 42965799 -160119733 - MER94 DNA DNA -50 84 1 209 234 75 56 chr5 42965843 42965950 -160119582 - L2 LINE L2 -1 3312 3204 2586 167 31 2 chr5 42967961 42968375 -160117157 + MSTB LTR MaLR 1 426 0 336 48 0 0 chr5 42968997 42969039 -160116493 + (CA)n Simple_repeat Simple_repeat 1 42 0 342 205 51 26 chr5 42969581 42969659 -160115873 + MIR SINE MIR 28 107 -155 551 246 39 30 chr5 42969691 42969894 -160115638 - MIR SINE MIR -55 207 3 212 301 36 0 chr5 42969926 42970009 -160115523 + MIR SINE MIR 124 209 -53 593 239 193 10 chr5 42970176 42970373 -160115159 - MIR SINE MIR -17 245 13 300 27 0 0 chr5 42970446 42970483 -160115049 + (TG)n Simple_repeat Simple_repeat 2 38 0 6983 111 34 8 chr5 42970552 42972084 -160113448 + L1MA2 LINE L1 4737 6304 0 355 323 93 58 chr5 42972719 42973010 -160112522 - L2 LINE L2 -44 3228 2928 2078 140 3 0 chr5 42973897 42974189 -160111343 - AluSx SINE Alu -19 293 1 223 240 0 93 chr5 42974683 42974758 -160110774 - MIR3 SINE MIR -135 73 6 614 250 60 24 chr5 42974834 42975002 -160110530 + MER5B DNA MER1_type 1 174 -4 853 210 113 16 chr5 42975597 42975783 -160109749 - MER63A DNA MER1_type -4 206 3 1607 241 106 34 chr5 42975898 42976597 -160108935 + L2 LINE L2 2302 3313 0 320 305 42 0 chr5 42976701 42976796 -160108736 - MIR3 SINE MIR -33 175 77 682 50 0 0 chr5 42977967 42978047 -160107485 + L1PA8 LINE L1 6075 6154 -18 306 0 0 0 chr5 42978048 42978082 -160107450 + (CA)n Simple_repeat Simple_repeat 2 35 0 800 259 81 24 chr5 42978257 42978504 -160107028 + MIR SINE MIR 1 261 -1 294 299 69 23 chr5 42979451 42979625 -160105907 + L2 LINE L2 2013 2194 -1120 700 244 78 69 chr5 42979641 42980063 -160105469 - HAL1 LINE L1 -34 2473 2048 337 295 139 12 chr5 42980226 42980392 -160105140 - HAL1 LINE L1 -686 1821 1635 474 288 0 0 chr5 42980460 42980592 -160104940 - HAL1 LINE L1 -880 1627 1496 2789 234 107 18 chr5 42980673 42981704 -160103828 - L1ME3 LINE L1 -45 6117 4990 852 282 57 31 chr5 42981699 42982157 -160103375 - HAL1 LINE L1 -1004 1503 1034 * 234 387 65 16 chr5 42982555 42982803 -160102729 + L2 LINE L2 2441 2700 -614 * 629 176 22 52 chr5 42982800 42982899 -160102633 + L2 LINE L2 3182 3277 -36 2464 134 22 3 chr5 42982899 42983256 -160102276 - THE1B LTR MaLR 0 364 1 629 176 22 52 chr5 42983256 42983292 -160102240 + L2 LINE L2 3277 3313 0 308 307 63 94 chr5 42983395 42983682 -160101850 + L2 LINE L2 2806 3083 -189 1117 263 94 38 chr5 42983723 42984095 -160101437 + MLT1I LTR MaLR 9 401 -8 483 308 111 11 chr5 42984233 42984457 -160101075 - MIR SINE MIR -13 249 3 2210 193 100 19 chr5 42985706 42986225 -160099307 - MER74B LTR ERVL -3 619 59 374 271 153 21 chr5 42986268 42986412 -160099120 - MIR SINE MIR -50 212 50 351 192 51 26 chr5 42987198 42987276 -160098256 + MIR SINE MIR 28 107 -155 560 243 45 30 chr5 42987307 42987509 -160098023 - MIR SINE MIR -55 207 3 371 270 103 0 chr5 42987541 42987667 -160097865 + MIR SINE MIR 124 262 0 1231 116 0 29 chr5 42988447 42988620 -160096912 + AluSg/x SINE Alu 134 301 -11 804 297 84 3 chr5 42989334 42989620 -160095912 + MLT1I LTR MaLR 2 310 -99 1194 126 29 29 chr5 42989984 42990190 -160095342 + MLT2C2 LTR ERVL 5 210 -254 30 103 0 0 chr5 42990226 42990333 -160095199 + AT_rich Low_complexity Low_complexity 1 107 0 406 288 46 17 chr5 42991291 42991491 -160094041 - MER63 DNA MER1_type 0 1062 1 376 318 104 10 chr5 42991951 42992143 -160093389 - MER63A DNA MER1_type 0 210 1 264 357 102 0 chr5 42992806 42992904 -160092628 + L2 LINE L2 3126 3233 -39 21 36 0 0 chr5 42993169 42993197 -160092335 + AT_rich Low_complexity Low_complexity 1 28 0 379 0 39 0 chr5 42994185 42994236 -160091296 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 42995595 42995618 -160089914 + (T)n Simple_repeat Simple_repeat 1 23 0 506 289 123 8 chr5 42996478 42996731 -160088801 - L1ME3A LINE L1 -311 5859 5578 267 150 0 0 chr5 42997701 42997741 -160087791 - MER3 DNA MER1_type -165 44 5 530 291 118 8 chr5 42997774 42998028 -160087504 - L1ME3A LINE L1 -311 5859 5578 228 111 0 0 chr5 42998138 42998174 -160087358 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 976 224 90 57 chr5 42998350 42998649 -160086883 - MLT1F LTR MaLR -23 519 211 331 340 0 11 chr5 42999313 42999407 -160086125 + L2 LINE L2 3155 3247 -25 390 311 37 30 chr5 43000035 43000170 -160085362 + L3 LINE CR1 1361 1496 -81 1028 186 0 31 chr5 43000673 43000815 -160084717 - MER5A DNA MER1_type -1 188 52 2390 186 25 48 chr5 43000815 43001332 -160084200 - MLT1D LTR MaLR 0 505 1 1028 186 0 31 chr5 43001332 43001383 -160084149 - MER5A DNA MER1_type -137 52 1 269 324 115 14 chr5 43001794 43001933 -160083599 - MIR SINE MIR -30 232 80 788 236 22 0 chr5 43003459 43003641 -160081891 - MIR SINE MIR -56 206 21 1867 163 30 0 chr5 43003656 43003957 -160081575 - AluJb SINE Alu -2 310 1 323 144 22 33 chr5 43003996 43004086 -160081446 + CT-rich Low_complexity Low_complexity 4 92 0 267 286 0 36 chr5 43004132 43004216 -160081316 - L2 LINE L2 -5 3267 3187 6818 25 28 1 chr5 43004380 43005181 -160080351 + L1PA4 LINE L1 5332 6153 -2 256 214 18 0 chr5 43006201 43006257 -160079275 - MLT2C1 LTR ERVL 0 520 464 247 24 24 24 chr5 43006328 43006348 -160079184 + (GA)n Simple_repeat Simple_repeat 2 21 -21 2258 111 0 10 chr5 43006348 43006654 -160078878 + AluSq SINE Alu 1 303 -10 247 24 24 24 chr5 43006654 43006674 -160078858 + (GA)n Simple_repeat Simple_repeat 20 42 0 2047 153 24 6 chr5 43006677 43007017 -160078515 - MLT2C1 LTR ERVL -51 346 1 498 331 64 0 chr5 43007232 43007404 -160078128 - MER91A DNA MER1_type -13 183 1 768 188 7 0 chr5 43007894 43008032 -160077500 - L1ME3A LINE L1 -8 6162 6024 266 230 103 73 chr5 43008329 43008533 -160076999 + L1ME4a LINE L1 5725 5934 -187 2151 127 0 0 chr5 43008538 43008830 -160076702 + AluSc SINE Alu 1 292 -17 352 339 27 27 chr5 43009885 43010071 -160075461 - MIR3 SINE MIR -3 205 20 1416 224 24 48 chr5 43010327 43010548 -160074984 - LTR16C LTR ERVL -5 486 274 995 169 30 82 chr5 43010548 43010779 -160074753 - MER20 DNA MER1_type 0 219 1 1416 224 24 48 chr5 43010779 43010887 -160074645 - LTR16C LTR ERVL -217 274 165 394 272 30 94 chr5 43011066 43011268 -160074264 - L2 LINE L2 -1 3312 3124 735 245 186 59 chr5 43011305 43011676 -160073856 + L2 LINE L2 2894 3311 -2 489 322 112 29 chr5 43011686 43012078 -160073454 - L2 LINE L2 -206 3066 2643 577 243 43 32 chr5 43012416 43012614 -160072918 + MLT1I LTR MaLR 1 209 -200 243 313 0 0 chr5 43012656 43012723 -160072809 + MIR SINE MIR 20 86 -122 1896 133 0 0 chr5 43012759 43013022 -160072510 - AluSx SINE Alu -16 296 34 735 176 7 37 chr5 43013043 43013179 -160072353 - FLAM_A SINE Alu -1 132 1 191 304 43 61 chr5 43014063 43014178 -160071354 + MIR SINE MIR 24 137 -71 24 0 0 0 chr5 43014550 43014574 -160070958 + AT_rich Low_complexity Low_complexity 1 24 0 345 289 39 56 chr5 43014574 43014754 -160070778 - MIR3 SINE MIR -2 206 30 216 271 40 13 chr5 43015166 43015317 -160070215 + (TA)n Simple_repeat Simple_repeat 1 155 0 276 224 0 0 chr5 43015616 43015683 -160069849 + (TATG)n Simple_repeat Simple_repeat 2 68 0 383 217 0 12 chr5 43016949 43017032 -160068500 + MIR3 SINE MIR 79 160 -48 412 171 89 57 chr5 43017227 43017321 -160068211 + L1MEc LINE L1 25 125 -6271 7445 120 48 18 chr5 43017321 43017945 -160067587 + Tigger3b DNA MER2_type 1 605 -2423 2241 112 3 0 chr5 43017945 43018240 -160067292 - AluSp SINE Alu -16 297 2 7445 120 48 18 chr5 43018240 43018810 -160066722 + Tigger3b DNA MER2_type 605 1231 0 412 171 89 57 chr5 43018810 43018838 -160066694 + L1MEc LINE L1 125 151 -6245 * 3420 232 53 7 chr5 43018833 43019708 -160065824 + L1MEc LINE L1 433 1347 -5049 1807 229 89 14 chr5 43019708 43020126 -160065406 - MLT1D LTR MaLR 0 505 55 1297 198 70 89 chr5 43020126 43020540 -160064992 + MLT1C LTR MaLR 1 406 -61 2252 218 97 16 chr5 43020540 43020770 -160064762 + L1MEc LINE L1 1388 1598 -4798 3840 115 2 6 chr5 43020770 43021283 -160064249 + MER9 LTR ERVK 1 511 0 2252 218 97 16 chr5 43021283 43021763 -160063769 + L1MEc LINE L1 1598 2156 -4240 369 296 12 29 chr5 43021852 43022024 -160063508 + L1MC4 LINE L1 7872 8040 -2 * 4906 147 46 1 chr5 43022016 43022849 -160062683 + L1MB2 LINE L1 5299 6168 -3 1130 256 25 45 chr5 43022870 43023304 -160062228 + L1ME1 LINE L1 5738 6162 -4 486 270 15 7 chr5 43023391 43023528 -160062004 + L1ME LINE L1 5531 5668 -453 583 320 89 32 chr5 43024144 43025050 -160060482 + L1MEc LINE L1 2322 3279 -2936 1932 121 4 0 chr5 43025418 43025683 -160059849 - AluY SINE Alu -10 301 36 782 276 58 33 chr5 43026746 43027115 -160058417 - LTR16C LTR ERVL 0 491 63 440 310 13 0 chr5 43029098 43029253 -160056279 + (TGG)n Simple_repeat Simple_repeat 2 158 0 365 283 134 21 chr5 43029339 43029503 -160056029 + MER5A DNA MER1_type 4 189 0 225 94 0 0 chr5 43029981 43030013 -160055519 + (CA)n Simple_repeat Simple_repeat 1 32 0 1106 263 113 14 chr5 43030114 43030497 -160055035 - MLT1G1 LTR MaLR 0 588 167 344 233 86 43 chr5 43031567 43031683 -160053849 - L2 LINE L2 -11 3302 3182 297 191 0 29 chr5 43031760 43031828 -160053704 + MLT1J1 LTR MaLR 23 88 -358 288 0 0 0 chr5 43032904 43032936 -160052596 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 594 214 148 22 chr5 43033019 43033201 -160052331 + MLT1J2 LTR MaLR 23 227 -223 1244 235 11 0 chr5 43033228 43033509 -160052023 - L1M4 LINE L1 -2448 3698 3415 559 289 31 44 chr5 43033528 43033772 -160051760 + MLT1J2 LTR MaLR 200 447 -3 315 301 64 45 chr5 43033776 43033932 -160051600 + L2 LINE L2 3114 3272 0 222 257 29 14 chr5 43034041 43034111 -160051421 + CT-rich Low_complexity Low_complexity 3 73 0 697 223 128 51 chr5 43034677 43034950 -160050582 + MLT1H LTR MaLR 256 549 0 334 219 0 55 chr5 43035016 43035089 -160050443 + MIR SINE MIR 8 76 -186 473 321 78 14 chr5 43035142 43035360 -160050172 - MIR SINE MIR -27 235 4 190 315 9 46 chr5 43037520 43037628 -160047904 - MIR SINE MIR -110 152 49 1148 241 101 21 chr5 43037844 43037974 -160047558 - LTR16C LTR ERVL 0 491 373 2069 184 31 6 chr5 43037974 43038327 -160047205 + MLT1A1 LTR MaLR 1 362 -3 1148 241 101 21 chr5 43038327 43038524 -160047008 - LTR16C LTR ERVL -118 373 138 244 207 72 81 chr5 43038614 43038725 -160046807 + MLT1L LTR MaLR 110 219 -396 1417 208 74 74 chr5 43038932 43039216 -160046316 - MLT1C LTR MaLR -4 463 177 2144 107 7 10 chr5 43039216 43039516 -160046016 - AluSx SINE Alu -13 299 1 1417 208 74 74 chr5 43039516 43039693 -160045839 - MLT1C LTR MaLR -289 178 2 782 271 104 54 chr5 43039967 43040284 -160045248 - L2 LINE L2 0 3313 2981 590 260 119 78 chr5 43041243 43041294 -160044238 - MLT1J LTR MaLR -28 483 436 1790 171 3 22 chr5 43041294 43041609 -160043923 - AluJb SINE Alu -1 311 3 590 260 119 78 chr5 43041609 43041942 -160043590 - MLT1J LTR MaLR -75 436 83 1824 61 52 0 chr5 43043001 43043231 -160042301 - AluY SINE Alu -4 307 66 197 254 63 48 chr5 43043240 43043303 -160042229 - L2 LINE L2 -2 3270 3207 187 294 65 22 chr5 43043418 43043510 -160042022 + MIR SINE MIR 62 157 -105 1994 123 0 20 chr5 43043717 43044018 -160041514 - AluSx SINE Alu -17 295 1 201 39 0 0 chr5 43044026 43044052 -160041480 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1014 111 14 0 chr5 43044053 43044197 -160041335 - AluSq SINE Alu -33 280 135 307 261 188 24 chr5 43044385 43044586 -160040946 - MIR SINE MIR -28 234 14 347 286 105 0 chr5 43045008 43045113 -160040419 + L2 LINE L2 3140 3255 -17 216 220 17 17 chr5 43046026 43046085 -160039447 - L2 LINE L2 -4 3309 3251 1074 90 159 0 chr5 43048819 43049052 -160036480 - MER7A DNA MER2_type -73 273 6 7402 106 26 4 chr5 43052545 43053663 -160031869 - Tigger1 DNA MER2_type -248 2170 1028 1733 161 68 0 chr5 43055355 43055722 -160029810 - MER57A LTR ERV1 -10 393 2 931 170 10 154 chr5 43055730 43056042 -160029490 - MER57A LTR ERV1 -131 272 6 2362 68 10 0 chr5 43056823 43057116 -160028416 - AluSp SINE Alu -4 309 14 1637 144 44 0 chr5 43057589 43057839 -160027693 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 43057839 43057881 -160027651 + AT_rich Low_complexity Low_complexity 1 42 0 531 200 178 38 chr5 43058966 43059151 -160026381 + LOR1a LTR ERV1 233 443 -54 259 264 46 35 chr5 43059188 43059275 -160026257 - L2 LINE L2 -409 2904 2817 292 304 120 43 chr5 43059930 43060114 -160025418 + MIR SINE MIR 15 212 -50 386 226 199 53 chr5 43060259 43060485 -160025047 + LTR33A LTR ERVL 2 260 -263 2214 138 19 24 chr5 43060522 43060899 -160024633 + THE1C LTR MaLR 1 375 0 10360 121 47 23 chr5 43060899 43062268 -160023264 + THE1C-int LTR MaLR 1 1413 -167 1979 112 0 7 chr5 43062268 43062537 -160022995 - AluSq SINE Alu -14 299 33 10360 121 47 23 chr5 43062537 43062710 -160022822 + THE1C-int LTR MaLR 1413 1580 0 2231 129 27 22 chr5 43062712 43063083 -160022449 + THE1C LTR MaLR 3 375 0 286 276 71 41 chr5 43063093 43063289 -160022243 + LTR33A LTR ERVL 321 522 -1 207 0 0 0 chr5 43063364 43063387 -160022145 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4984 175 44 8 chr5 43063660 43065056 -160020476 + L1MB4 LINE L1 4730 6168 -12 476 186 17 5 chr5 43065056 43065663 -160019869 + (TA)n Simple_repeat Simple_repeat 1 614 0 231 255 0 0 chr5 43066816 43066863 -160018669 + L2 LINE L2 3213 3259 -13 682 270 89 62 chr5 43067183 43067487 -160018045 + MLT1L LTR MaLR 227 538 -77 185 263 12 0 chr5 43068817 43068844 -160016688 + (TA)n Simple_repeat Simple_repeat 1 26 -55 2079 144 61 0 chr5 43068844 43069171 -160016361 + MER7A DNA MER2_type 1 345 -1 185 263 12 0 chr5 43069171 43069223 -160016309 + (TA)n Simple_repeat Simple_repeat 26 81 0 315 239 43 34 chr5 43069246 43069363 -160016169 + L1ME LINE L1 5527 5644 -477 894 244 162 24 chr5 43069641 43070027 -160015505 + L1ME4a LINE L1 5597 6057 -64 1853 65 13 0 chr5 43070027 43070256 -160015276 - AluY SINE Alu 0 311 80 894 244 162 24 chr5 43070256 43070327 -160015205 + L1ME4a LINE L1 6057 6117 -4 428 219 119 53 chr5 43070941 43071092 -160014440 - MER5B DNA MER1_type -17 161 1 1978 59 0 59 chr5 43071612 43071911 -160013621 + AluY SINE Alu 29 311 0 716 298 34 21 chr5 43072167 43072405 -160013127 + MIR SINE MIR 22 262 0 209 318 79 60 chr5 43072475 43072727 -160012805 + L2 LINE L2 2830 3086 -186 253 217 17 17 chr5 43073181 43073241 -160012291 - MLT1K LTR MaLR -8 580 521 250 284 0 49 chr5 43073432 43073513 -160012019 - MER91C DNA MER1_type -33 107 31 219 226 57 0 chr5 43073782 43073835 -160011697 + (CATG)n Simple_repeat Simple_repeat 4 59 0 222 56 194 0 chr5 43073853 43073889 -160011643 - L2 LINE L2 -1 3271 3229 243 327 83 11 chr5 43074466 43074573 -160010959 + MIR SINE MIR 42 151 -81 * 257 273 0 0 chr5 43074568 43074623 -160010909 - L2 LINE L2 -15 3257 3203 201 219 55 41 chr5 43074635 43074708 -160010824 + MIR3 SINE MIR 122 195 -13 181 274 39 0 chr5 43074668 43074719 -160010813 + L2 LINE L2 2405 2457 -857 * 524 262 93 12 chr5 43075254 43075426 -160010106 + MIR SINE MIR 24 209 -53 248 263 131 0 chr5 43075525 43075624 -160009908 - MIR3 SINE MIR -6 202 91 264 260 26 13 chr5 43075765 43075842 -160009690 - MLT1L LTR MaLR -223 392 315 558 189 0 0 chr5 43075844 43075955 -160009577 + (TG)n Simple_repeat Simple_repeat 2 112 0 657 276 144 16 chr5 43075996 43076253 -160009279 - MLT1L LTR MaLR -325 290 1 191 305 34 0 chr5 43076496 43076555 -160008977 - L2 LINE L2 0 3313 3253 2410 97 0 6 chr5 43076648 43076959 -160008573 - AluSx SINE Alu -3 309 1 785 280 91 16 chr5 43077133 43077589 -160007943 + L1ME LINE L1 5197 5682 -439 22 35 0 0 chr5 43078154 43078183 -160007349 + AT_rich Low_complexity Low_complexity 1 29 0 740 268 31 18 chr5 43078340 43078568 -160006964 - MIR SINE MIR -4 258 28 183 211 35 18 chr5 43078559 43078616 -160006916 - MER5A DNA MER1_type -76 113 56 * 664 257 16 57 chr5 43078638 43078883 -160006649 - MIR SINE MIR -9 253 19 267 31 0 0 chr5 43079645 43079677 -160005855 + (CA)n Simple_repeat Simple_repeat 2 33 0 278 326 62 0 chr5 43080574 43080718 -160004814 - MIR SINE MIR -7 255 103 21 0 0 0 chr5 43081867 43081888 -160003644 + AT_rich Low_complexity Low_complexity 1 21 0 240 35 0 0 chr5 43081962 43081991 -160003541 + (TG)n Simple_repeat Simple_repeat 2 30 0 266 0 29 0 chr5 43082158 43082192 -160003340 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1470 18 0 0 chr5 43082241 43082404 -160003128 + AluY SINE Alu 149 311 0 2391 71 3 0 chr5 43082528 43082823 -160002709 + AluSp SINE Alu 14 309 -4 986 168 3 158 chr5 43083611 43083927 -160001605 + MER57A LTR ERV1 6 272 -131 2521 156 3 0 chr5 43083935 43084327 -160001205 + MER57A LTR ERV1 2 394 -9 296 111 50 212 chr5 43084379 43084478 -160001054 + LTR54 LTR ERV1 416 500 0 228 67 0 0 chr5 43084929 43084959 -160000573 + (CA)n Simple_repeat Simple_repeat 2 31 0 4703 120 3 3 chr5 43085985 43086620 -159998912 - MER41B LTR ERV1 0 635 1 230 191 0 32 chr5 43086903 43086966 -159998566 + GA-rich Low_complexity Low_complexity 4 64 0 240 371 48 0 chr5 43087002 43087107 -159998425 + MIR3 SINE MIR 60 169 -39 2316 112 0 6 chr5 43088001 43088315 -159997217 - AluSx SINE Alu 0 312 1 1662 150 36 4 chr5 43089120 43089373 -159996159 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 43089373 43089415 -159996117 + AT_rich Low_complexity Low_complexity 1 42 0 207 369 86 20 chr5 43089650 43089848 -159995684 + L2 LINE L2 2902 3112 -160 212 246 35 0 chr5 43092134 43092191 -159993341 + (TATG)n Simple_repeat Simple_repeat 2 60 0 256 274 149 2 chr5 43092206 43092340 -159993192 - MIR3 SINE MIR -47 161 45 408 340 155 9 chr5 43092807 43093136 -159992396 - L2 LINE L2 -609 2705 2329 225 132 15 29 chr5 43094434 43094502 -159991030 + T-rich Low_complexity Low_complexity 5 71 0 280 235 38 30 chr5 43094521 43094653 -159990879 + T-rich Low_complexity Low_complexity 3 135 0 207 0 0 0 chr5 43094771 43094794 -159990738 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 679 237 95 68 chr5 43095085 43095495 -159990037 + HAL1b LINE L1 150 570 -778 310 145 65 0 chr5 43095501 43095563 -159989969 + L1MA9 LINE L1 6241 6306 -6 6431 229 96 18 chr5 43095879 43097642 -159987890 - L1ME2 LINE L1 -20 6144 4079 2199 97 3 26 chr5 43097642 43097951 -159987581 - AluSg SINE Alu -8 302 1 6431 229 96 18 chr5 43097951 43099014 -159986518 - L1ME2 LINE L1 -2085 4079 3100 200 221 156 66 chr5 43099060 43099182 -159986350 - L2 LINE L2 -1300 2014 1882 277 313 0 0 chr5 43099386 43099466 -159986066 + LTR67 LTR ERVL 102 181 -376 585 318 83 14 chr5 43099500 43099789 -159985743 + LTR67 LTR ERVL 244 552 -5 314 280 107 40 chr5 43099789 43099939 -159985593 + MIR SINE MIR 54 213 -49 180 0 0 0 chr5 43100493 43100513 -159985019 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 43100636 43100657 -159984875 + AT_rich Low_complexity Low_complexity 1 21 0 15678 128 14 38 chr5 43103399 43105878 -159979654 - Tigger1 DNA MER2_type 0 2418 1 685 335 35 14 chr5 43106560 43106850 -159978682 - MLT1L LTR MaLR -62 553 258 1793 213 94 31 chr5 43107044 43107557 -159977975 - MLT1H LTR MaLR -4 545 1 540 211 34 34 chr5 43107585 43107732 -159977800 + MIR SINE MIR 78 224 -38 2186 117 0 13 chr5 43107826 43108125 -159977407 + AluSx SINE Alu 1 295 -17 1069 177 0 0 chr5 43108732 43108896 -159976636 + Tigger3(Golem) DNA MER2_type 2863 3026 -3 232 226 32 0 chr5 43109183 43109245 -159976287 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 5996 30 1 0 chr5 43109297 43109955 -159975577 - L1PA4 LINE L1 -4 6151 5493 558 262 21 0 chr5 43110261 43110402 -159975130 + MIR SINE MIR 11 154 -108 480 295 92 12 chr5 43110871 43111044 -159974488 - MER91A DNA MER1_type -7 189 3 545 236 134 4 chr5 43111196 43111511 -159974021 + LTR16B LTR ERVL 11 388 -76 240 295 48 19 chr5 43111556 43111661 -159973871 - MARNA DNA Mariner -285 301 194 277 186 0 0 chr5 43111688 43111731 -159973801 - 5S rRNA rRNA -78 43 1 23 0 0 0 chr5 43112333 43112356 -159973176 + AT_rich Low_complexity Low_complexity 1 23 0 837 172 0 16 chr5 43112362 43112490 -159973042 + AluJb SINE Alu 2 126 -186 24 96 0 0 chr5 43112490 43112563 -159972969 + AT_rich Low_complexity Low_complexity 1 73 0 2313 179 58 32 chr5 43112572 43113017 -159972515 + MER74A LTR ERVL 14 477 -81 2388 96 3 0 chr5 43113017 43113318 -159972214 - AluSq SINE Alu -11 302 1 2313 179 58 32 chr5 43113318 43113403 -159972129 + MER74A LTR ERVL 477 558 0 280 274 0 105 chr5 43113739 43113863 -159971669 - MIR SINE MIR -32 230 120 252 250 118 0 chr5 43113881 43113949 -159971583 - MIR3 SINE MIR -11 197 122 840 189 4 0 chr5 43115926 43116161 -159969371 + (TG)n Simple_repeat Simple_repeat 1 236 0 21 0 0 0 chr5 43116330 43116351 -159969181 + AT_rich Low_complexity Low_complexity 1 21 0 257 311 227 20 chr5 43116447 43116698 -159968834 + L3b LINE CR1 1157 1459 -124 261 250 110 10 chr5 43116784 43116884 -159968648 - L1ME4a LINE L1 -1 6120 6011 21 57 0 0 chr5 43117436 43117471 -159968061 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 43117544 43117573 -159967959 + AT_rich Low_complexity Low_complexity 1 29 0 470 303 85 71 chr5 43118471 43119003 -159966529 - MLT1K LTR MaLR 0 588 50 437 301 79 15 chr5 43119144 43119410 -159966122 - L1ME4a LINE L1 -345 5776 5494 1869 167 3 7 chr5 43119523 43119823 -159965709 - AluJb SINE Alu -13 299 1 327 200 0 90 chr5 43120325 43120425 -159965107 + MIR SINE MIR 117 207 -55 6201 87 27 0 chr5 43120447 43121091 -159964441 + L1PA13 LINE L1 4132 4757 -1406 2144 118 3 0 chr5 43121091 43121388 -159964144 + AluSg SINE Alu 1 298 -12 6201 87 27 0 chr5 43121388 43122799 -159962733 + L1PA13 LINE L1 4757 6161 -2 692 187 43 7 chr5 43123173 43123312 -159962220 + MIR SINE MIR 46 189 -73 396 0 0 0 chr5 43123312 43123356 -159962176 + (TA)n Simple_repeat Simple_repeat 1 44 0 261 233 50 0 chr5 43123560 43123620 -159961912 + L2 LINE L2 3251 3313 0 25 31 0 0 chr5 43123708 43123740 -159961792 + AT_rich Low_complexity Low_complexity 1 32 0 216 97 0 0 chr5 43124107 43124138 -159961394 + (GAA)n Simple_repeat Simple_repeat 2 32 0 467 306 120 61 chr5 43125214 43125921 -159959611 - L2 LINE L2 -33 3280 2521 351 0 0 0 chr5 43126974 43127013 -159958519 + (CA)n Simple_repeat Simple_repeat 1 39 0 244 241 88 44 chr5 43127014 43127151 -159958381 + L1ME2 LINE L1 1385 1527 -5332 588 318 35 21 chr5 43127154 43127440 -159958092 + L1ME2 LINE L1 1655 1944 -5003 973 244 7 3 chr5 43127449 43127744 -159957788 + L1ME2 LINE L1 3578 3873 -3084 * 2841 226 89 20 chr5 43127736 43127909 -159957623 + L1ME2 LINE L1 4972 5132 -1843 653 216 8 0 chr5 43127909 43128034 -159957498 - FLAM_C SINE Alu -7 126 1 2841 226 89 20 chr5 43128034 43129674 -159955858 + L1ME2 LINE L1 5132 6966 -9 742 107 0 41 chr5 43130082 43130203 -159955329 + FLAM_C SINE Alu 23 138 -5 300 244 161 36 chr5 43130213 43130386 -159955146 + MIR SINE MIR 58 253 -9 301 319 140 32 chr5 43130999 43131278 -159954254 - L3 LINE CR1 -7 1570 1262 180 307 114 64 chr5 43131379 43131519 -159954013 + L2 LINE L2 3102 3248 -24 2219 246 89 26 chr5 43131606 43132323 -159953209 - MER21B LTR ERV1 -60 803 42 334 254 0 0 chr5 43132325 43132396 -159953136 - MER21B LTR ERV1 -774 89 19 277 226 54 32 chr5 43132394 43132487 -159953045 - MER21B LTR ERV1 -757 106 12 * 930 183 204 21 chr5 43132698 43132982 -159952550 - MER2 DNA MER2_type 0 345 10 569 296 139 7 chr5 43133134 43133414 -159952118 - L3 LINE CR1 -382 1195 879 279 257 138 18 chr5 43133684 43133793 -159951739 - MER5A DNA MER1_type -66 123 2 395 242 10 0 chr5 43133899 43133998 -159951534 - MER58 DNA MER1_type -3 2417 2318 1417 206 94 28 chr5 43134017 43134453 -159951079 + MLT1C LTR MaLR 1 465 -2 278 164 0 60 chr5 43134455 43134522 -159951010 - MER58 DNA MER1_type -244 97 35 222 299 206 10 chr5 43134636 43134830 -159950702 + L2 LINE L2 3080 3311 -2 411 304 76 23 chr5 43134859 43135030 -159950502 - MIR3 SINE MIR -26 182 3 1808 216 102 18 chr5 43135481 43136050 -159949482 - MLT1E3 LTR MaLR -7 617 1 226 303 33 16 chr5 43136195 43136317 -159949215 + LTR67 LTR ERVL 429 552 -5 187 369 15 0 chr5 43137632 43137697 -159947835 + MIR SINE MIR 8 73 -189 512 256 72 31 chr5 43137697 43137892 -159947640 - MLT1J2 LTR MaLR 0 450 248 646 150 14 68 chr5 43137934 43138081 -159947451 - MLT1J2 LTR MaLR -305 145 7 181 292 108 0 chr5 43138082 43138147 -159947385 + MIR SINE MIR 66 137 -125 1963 182 43 0 chr5 43138153 43138188 -159947344 - MLT2D LTR ERVL -8 406 374 393 22 0 0 chr5 43138188 43138234 -159947298 + (TG)n Simple_repeat Simple_repeat 1 46 0 1963 182 43 0 chr5 43138234 43138571 -159946961 - MLT2D LTR ERVL -40 374 18 282 265 15 0 chr5 43138592 43138660 -159946872 + MIR SINE MIR 188 256 -6 255 259 54 54 chr5 43138811 43138923 -159946609 - MIR SINE MIR -43 219 108 25 0 0 0 chr5 43139187 43139212 -159946320 + AT_rich Low_complexity Low_complexity 1 25 0 356 294 123 25 chr5 43139431 43139594 -159945938 + MIR3 SINE MIR 13 191 -17 183 286 0 20 chr5 43140490 43140539 -159944993 + MIR SINE MIR 74 121 -87 318 188 129 35 chr5 43140669 43140754 -159944778 - MIR SINE MIR -71 191 99 1639 169 47 51 chr5 43140754 43141146 -159944386 + MLT1B LTR MaLR 1 593 0 387 259 37 44 chr5 43141266 43141401 -159944131 + MER5B DNA MER1_type 26 159 -19 1986 240 53 35 chr5 43142236 43142874 -159942658 - L1ME3 LINE L1 -29 6133 5484 191 212 88 0 chr5 43143326 43143374 -159942158 + MIR SINE MIR 93 146 -116 482 347 61 66 chr5 43143401 43143966 -159941566 - L2 LINE L2 -19 3253 2694 256 258 21 21 chr5 43144003 43144100 -159941432 + A-rich Low_complexity Low_complexity 2 98 0 555 274 107 0 chr5 43144125 43144517 -159941015 + L1ME3A LINE L1 5045 5481 -683 1245 225 138 0 chr5 43144532 43144888 -159940644 + L1ME3A LINE L1 5591 5995 -175 263 261 14 0 chr5 43145839 43145901 -159939631 + MER112 DNA MER1_type 9 71 -189 421 179 199 13 chr5 43145901 43146052 -159939480 - MER104 DNA Tc2 -1 179 1 375 260 0 29 chr5 43146130 43146234 -159939298 + MER112 DNA MER1_type 154 254 -6 619 314 69 0 chr5 43147236 43147411 -159938121 + MER91A DNA MER1_type 1 187 -9 409 291 174 48 chr5 43148215 43148634 -159936898 + L2 LINE L2 2842 3313 0 330 257 10 30 chr5 43148679 43148780 -159936752 + MER94 DNA DNA 2 100 -34 380 281 115 31 chr5 43149334 43149526 -159936006 + MIR SINE MIR 46 253 -9 270 0 0 0 chr5 43149598 43149628 -159935904 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1697 171 3 14 chr5 43149630 43149916 -159935616 - AluJo SINE Alu -24 288 6 793 286 74 0 chr5 43149927 43150144 -159935388 + MIR SINE MIR 3 235 -27 1220 178 156 58 chr5 43150583 43150999 -159934533 - MSTB2 LTR MaLR 0 457 1 495 140 0 11 chr5 43151985 43152078 -159933454 + MER53 DNA DNA 92 183 -6 194 313 15 0 chr5 43152084 43152151 -159933381 - MIR SINE MIR -112 96 29 546 234 6 91 chr5 43152356 43152412 -159933120 - MER5B DNA MER1_type -1 177 118 2154 120 0 7 chr5 43152412 43152704 -159932828 + AluSx SINE Alu 10 299 -13 546 234 6 91 chr5 43152704 43152822 -159932710 - MER5B DNA MER1_type -60 118 18 189 0 0 0 chr5 43152912 43152933 -159932599 + (TG)n Simple_repeat Simple_repeat 2 22 0 439 280 118 32 chr5 43155718 43156022 -159929510 + L1MC4a LINE L1 5318 5395 -726 330 45 0 0 chr5 43156022 43156066 -159929466 + (CA)n Simple_repeat Simple_repeat 2 45 0 439 280 118 32 chr5 43156066 43156287 -159929245 + L1MC4a LINE L1 5395 5595 -526 2003 160 0 13 chr5 43159524 43159861 -159925671 - AluJo SINE Alu 0 334 2 410 213 193 66 chr5 43159925 43160122 -159925410 - MIR SINE MIR -28 234 13 192 287 138 11 chr5 43160215 43160309 -159925223 - L2 LINE L2 0 3313 3208 198 194 0 0 chr5 43160530 43160566 -159924966 - MIR3 SINE MIR -11 197 162 250 206 128 20 chr5 43161255 43161357 -159924175 - L1MC4 LINE L1 0 8042 7930 398 157 0 33 chr5 43161528 43161649 -159923883 + (TA)n Simple_repeat Simple_repeat 2 118 0 180 111 0 0 chr5 43161733 43161760 -159923772 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 378 57 0 0 chr5 43161781 43161834 -159923698 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1885 144 0 7 chr5 43161843 43162127 -159923405 - AluSx SINE Alu -30 282 1 473 272 40 13 chr5 43162155 43162379 -159923153 - L1ME2 LINE L1 -209 5955 5726 696 284 35 12 chr5 43162388 43162654 -159922878 - L1ME4a LINE L1 -184 5937 5668 379 263 124 29 chr5 43162699 43162836 -159922696 + MIR SINE MIR 7 156 -106 200 276 40 13 chr5 43162968 43163044 -159922488 + MIR SINE MIR 179 256 -6 248 250 0 11 chr5 43163046 43163138 -159922394 + (CA)n Simple_repeat Simple_repeat 2 92 0 263 26 51 0 chr5 43164893 43164932 -159920600 + (CGGAA)n Simple_repeat Simple_repeat 5 45 0 219 114 0 0 chr5 43164934 43164969 -159920563 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 1931 96 4 0 chr5 43165221 43165498 -159920034 - AluSx SINE Alu 0 310 33 290 274 115 18 chr5 43165669 43165782 -159919750 + MIR SINE MIR 19 142 -66 2196 116 0 0 chr5 43166499 43166793 -159918739 + AluSq SINE Alu 1 294 -19 228 312 64 46 chr5 43169755 43169864 -159915668 - L2 LINE L2 -12 3260 3150 421 264 8 40 chr5 43169915 43170040 -159915492 + MLT1L LTR MaLR 18 138 -477 2029 134 10 10 chr5 43170040 43170347 -159915185 - AluSx SINE Alu -5 307 1 796 84 19 0 chr5 43170362 43170469 -159915063 - AluY SINE Alu -2 309 201 410 307 40 27 chr5 43170471 43170621 -159914911 - MER5B DNA MER1_type -11 167 16 1045 276 66 39 chr5 43170627 43170985 -159914547 + MLT1L LTR MaLR 136 483 -132 736 253 6 6 chr5 43170985 43171163 -159914369 - MER5B DNA MER1_type 0 178 1 1045 276 66 39 chr5 43171163 43171211 -159914321 + MLT1L LTR MaLR 483 528 -87 899 238 5 5 chr5 43171211 43171400 -159914132 + MER5A DNA MER1_type 1 189 0 1045 276 66 39 chr5 43171400 43171459 -159914073 + MLT1L LTR MaLR 528 615 0 264 229 0 0 chr5 43172781 43172842 -159912690 - L1ME2 LINE L1 -10 6154 6094 22 0 0 0 chr5 43172857 43172879 -159912653 + AT_rich Low_complexity Low_complexity 1 22 0 186 279 0 0 chr5 43173487 43173530 -159912002 - MIR3 SINE MIR -48 160 118 294 95 0 0 chr5 43174148 43174190 -159911342 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 666 87 0 0 chr5 43175348 43175440 -159910092 + AluSc SINE Alu 218 309 0 627 281 54 50 chr5 43176808 43177050 -159908482 + MIR SINE MIR 20 262 0 201 129 0 0 chr5 43177087 43177118 -159908414 + (CA)n Simple_repeat Simple_repeat 1 31 0 1832 153 7 0 chr5 43177171 43177452 -159908080 + AluSx SINE Alu 1 283 -29 205 274 20 0 chr5 43177519 43177570 -159907962 - L2 LINE L2 -10 3262 3211 208 127 36 0 chr5 43178792 43178847 -159906685 + (CA)n Simple_repeat Simple_repeat 2 58 0 2973 85 8 8 chr5 43178892 43179267 -159906265 + THE1C LTR MaLR 1 375 0 358 245 118 10 chr5 43179305 43179407 -159906125 - L2 LINE L2 0 3272 3160 449 231 52 58 chr5 43179561 43179637 -159905895 - MIR SINE MIR -12 250 175 192 40 0 0 chr5 43179637 43179662 -159905870 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2271 106 0 0 chr5 43179664 43179957 -159905575 - AluSc SINE Alu -16 293 1 449 231 52 58 chr5 43179957 43180050 -159905482 - MIR SINE MIR -88 174 79 4422 116 65 9 chr5 43180226 43180578 -159904954 + L1PB1 LINE L1 5430 5761 -390 207 0 0 0 chr5 43180578 43180601 -159904931 + (TA)n Simple_repeat Simple_repeat 2 24 0 4422 116 65 9 chr5 43180601 43180929 -159904603 + L1PB1 LINE L1 5761 6148 -3 180 0 0 0 chr5 43181920 43181940 -159903592 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1111 255 61 21 chr5 43182816 43183142 -159902390 + L1ME4a LINE L1 5528 5866 -255 268 325 130 0 chr5 43184912 43185035 -159900497 + L2 LINE L2 3171 3309 -4 372 284 55 2 chr5 43186132 43186244 -159899288 - MIR SINE MIR -87 121 2 1719 190 46 9 chr5 43186398 43186725 -159898807 - MER58B DNA MER1_type 0 341 3 2208 127 3 0 chr5 43187416 43187716 -159897816 - AluSx SINE Alu -9 303 3 358 267 8 53 chr5 43188968 43189099 -159896433 + L2 LINE L2 2935 3059 -213 245 327 45 0 chr5 43189620 43189730 -159895802 + LTR16A1 LTR ERVL 179 293 -164 267 242 16 0 chr5 43189731 43189793 -159895739 - MIR SINE MIR -160 102 40 634 311 40 13 chr5 43189998 43190223 -159895309 + MIR SINE MIR 20 250 -12 984 247 57 4 chr5 43192528 43192755 -159892777 - LTR16A LTR ERVL 0 450 212 222 317 164 0 chr5 43192866 43192970 -159892562 - L2 LINE L2 -11 3302 3182 299 250 16 0 chr5 43193559 43193623 -159891909 + LTR67 LTR ERVL 491 555 -2 303 292 90 35 chr5 43193629 43193773 -159891759 - MIR SINE MIR -87 175 24 233 291 27 36 chr5 43195719 43195829 -159889703 - L1ME4a LINE L1 -12 6109 6001 480 347 144 21 chr5 43195860 43196320 -159889212 - L2 LINE L2 -62 3210 2695 571 199 23 0 chr5 43196382 43196553 -159888979 + GA-rich Low_complexity Low_complexity 3 177 0 213 39 0 0 chr5 43197352 43197378 -159888154 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 315 304 36 14 chr5 43197514 43197652 -159887880 + MER112 DNA MER1_type 38 178 -82 2631 164 118 23 chr5 43197674 43198240 -159887292 + L1ME3A LINE L1 5550 6169 -1 263 257 40 14 chr5 43198240 43198314 -159887218 + MER112 DNA MER1_type 178 253 -7 21 0 0 0 chr5 43198360 43198381 -159887151 + AT_rich Low_complexity Low_complexity 1 21 0 2419 99 0 0 chr5 43250445 43250749 -159834783 - AluSq SINE Alu -9 304 1 464 139 7 115 chr5 43250749 43250773 -159834759 - L1 LINE L1 -853 5293 5268 2114 188 11 3 chr5 43250773 43251135 -159834397 - MLT1A1 LTR MaLR 0 365 1 464 139 7 115 chr5 43251135 43251247 -159834285 - L1 LINE L1 -878 5268 5155 231 279 41 68 chr5 43251329 43251403 -159834129 + L1ME LINE L1 5547 5617 -504 972 206 38 5 chr5 43251403 43251612 -159833920 + MER20 DNA MER1_type 1 216 -3 231 279 41 68 chr5 43251612 43251684 -159833848 + L1ME LINE L1 5617 5689 -432 273 338 15 0 chr5 43251751 43251884 -159833648 + L1ME LINE L1 5636 5770 -351 202 261 227 0 chr5 43252477 43252565 -159832967 - L2 LINE L2 -1 3312 3205 253 251 91 63 chr5 43252565 43252740 -159832792 + L1ME LINE L1 5706 5885 -236 2296 65 0 4 chr5 43252817 43253096 -159832436 + AluY SINE Alu 1 278 -33 465 34 0 0 chr5 43253096 43253155 -159832377 + (CA)n Simple_repeat Simple_repeat 2 60 0 1001 136 101 0 chr5 43253155 43253324 -159832208 + MER46A DNA MER2_type 2 187 -49 195 100 0 0 chr5 43253353 43253383 -159832149 + (CA)n Simple_repeat Simple_repeat 2 31 0 498 274 157 56 chr5 43254626 43254983 -159830549 + Charlie8 DNA MER1_type 38 430 -1987 471 329 102 5 chr5 43256080 43256296 -159829236 - MIR SINE MIR -6 256 20 274 283 113 22 chr5 43256725 43256878 -159828654 + MIR SINE MIR 31 191 -41 207 69 0 0 chr5 43257353 43257382 -159828150 + (TG)n Simple_repeat Simple_repeat 2 30 0 430 270 0 0 chr5 43257603 43257692 -159827840 + MER119 DNA MER1_type 5 93 -490 2280 106 62 14 chr5 43257712 43258070 -159827462 - THE1C LTR MaLR 0 375 1 603 213 16 0 chr5 43258077 43258204 -159827328 + MER119 DNA MER1_type 454 582 -1 642 122 99 41 chr5 43259252 43259424 -159826108 - Charlie7 DNA MER1_type -2 2610 2429 333 248 59 20 chr5 43259406 43259507 -159826025 - Charlie7 DNA MER1_type -2507 105 1 * 246 286 126 17 chr5 43259524 43259643 -159825889 + MIR SINE MIR 19 150 -58 2405 83 0 7 chr5 43259645 43259946 -159825586 + AluSq SINE Alu 1 299 -14 342 286 0 0 chr5 43260005 43260101 -159825431 + MER20B DNA MER1_type 103 202 -17 297 193 136 23 chr5 43260403 43260491 -159825041 - MIR SINE MIR -88 120 23 2353 101 10 0 chr5 43260724 43261021 -159824511 + AluSq SINE Alu 2 301 -12 1037 271 132 8 chr5 43261117 43261504 -159824028 - MLT1J LTR MaLR -38 473 39 385 210 50 0 chr5 43261697 43261797 -159823735 + MIR SINE MIR 93 197 -65 412 317 63 0 chr5 43262906 43263048 -159822484 + MIR SINE MIR 51 201 -61 636 299 122 58 chr5 43263787 43264566 -159820966 - L2 LINE L2 0 3272 2544 198 0 0 0 chr5 43264566 43264588 -159820944 + (GA)n Simple_repeat Simple_repeat 1 22 0 636 299 122 58 chr5 43264588 43265218 -159820314 - L2 LINE L2 -728 2544 1757 759 218 35 11 chr5 43265386 43265560 -159819972 - MER5B DNA MER1_type 0 178 1 413 275 104 22 chr5 43265947 43266129 -159819403 - MIR SINE MIR -54 208 12 375 23 0 0 chr5 43266283 43266327 -159819205 + (CA)n Simple_repeat Simple_repeat 2 45 0 195 231 0 19 chr5 43266327 43266379 -159819153 + MER5A DNA MER1_type 136 186 -3 348 77 0 0 chr5 43266469 43266521 -159819011 + (CA)n Simple_repeat Simple_repeat 2 53 0 206 306 106 60 chr5 43267297 43267532 -159818000 - L2 LINE L2 -79 3193 2948 2402 97 0 0 chr5 43267660 43267958 -159817574 - AluSg SINE Alu -10 300 3 237 311 85 61 chr5 43267995 43268159 -159817373 - L2 LINE L2 -182 3090 2923 2432 85 0 0 chr5 43268921 43269215 -159816317 + AluSg SINE Alu 2 295 -15 973 297 82 28 chr5 43270230 43270691 -159814841 - MLT1K LTR MaLR -70 518 33 2256 105 0 3 chr5 43271000 43271294 -159814238 + AluSx SINE Alu 1 293 -19 478 206 147 18 chr5 43271582 43271752 -159813780 - LTR16C LTR ERVL -2 489 298 486 269 97 19 chr5 43272284 43272327 -159813205 - MER115 DNA AcHobo -11 682 644 2213 112 3 0 chr5 43272327 43272613 -159812919 - AluSq SINE Alu -26 287 1 486 269 97 19 chr5 43272613 43272785 -159812747 - MER115 DNA AcHobo -49 644 450 194 307 45 23 chr5 43272805 43272893 -159812639 + MIR SINE MIR 56 145 -117 311 347 19 7 chr5 43272986 43273123 -159812409 - MIR SINE MIR -67 141 19 1235 181 19 5 chr5 43273414 43273630 -159811902 + MLT1A1 LTR MaLR 4 222 -143 1293 166 9 40 chr5 43273732 43273955 -159811577 - MER20 DNA MER1_type -2 217 2 237 286 71 18 chr5 43274467 43274579 -159810953 + MIR3 SINE MIR 82 199 -9 435 316 35 12 chr5 43274642 43274813 -159810719 + L2 LINE L2 2635 2809 -505 254 242 48 81 chr5 43275325 43275511 -159810021 - LTR28 LTR ERV1 -11 1009 830 989 257 123 49 chr5 43275516 43276026 -159809506 - LTR1B LTR ERV1 -223 603 56 4473 93 5 19 chr5 43276144 43276934 -159808598 - L1PA14 LINE L1 -301 5860 5083 2328 116 0 0 chr5 43276979 43277289 -159808243 - AluSq SINE Alu -3 310 1 225 0 0 0 chr5 43277292 43277317 -159808215 + (T)n Simple_repeat Simple_repeat 1 25 0 2204 122 3 7 chr5 43277521 43277825 -159807707 - AluSp SINE Alu -10 303 1 1194 159 9 40 chr5 43277825 43278052 -159807480 - AluJo SINE Alu -8 304 85 244 274 141 47 chr5 43278457 43278734 -159806798 + L2 LINE L2 1611 1913 -1401 201 74 0 0 chr5 43278838 43278865 -159806667 + (GA)n Simple_repeat Simple_repeat 2 28 0 207 100 0 0 chr5 43279098 43279128 -159806404 + (CTCA)n Simple_repeat Simple_repeat 1 30 0 181 250 0 0 chr5 43279131 43279171 -159806361 - L2 LINE L2 -12 3301 3262 864 178 0 0 chr5 43280042 43280177 -159805355 - FLAM_C SINE Alu -7 136 2 433 347 75 14 chr5 43280870 43281340 -159804192 - L2 LINE L2 -25 3288 2780 277 263 13 0 chr5 43282035 43282111 -159803421 + LTR33 LTR ERVL 437 513 -8 1075 169 245 11 chr5 43283429 43283702 -159801830 + MER58B DNA MER1_type 1 337 -4 618 217 68 28 chr5 43283931 43284215 -159801317 + LTR48B LTR ERV1 1 298 -346 478 204 72 88 chr5 43284265 43284446 -159801086 + LTR48B LTR ERV1 467 644 0 316 214 36 86 chr5 43284796 43284936 -159800596 - MIR SINE MIR -109 153 21 192 77 0 0 chr5 43285860 43285886 -159799646 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 571 246 123 65 chr5 43286115 43286184 -159799348 - L2 LINE L2 0 3313 3249 2080 94 0 69 chr5 43286184 43286504 -159799028 + AluSx SINE Alu 1 298 -14 571 246 123 65 chr5 43286504 43286657 -159798875 - L2 LINE L2 -64 3249 3106 1863 129 66 0 chr5 43286657 43286928 -159798604 + AluJb SINE Alu 1 289 -23 571 246 123 65 chr5 43286928 43287103 -159798429 - L2 LINE L2 -207 3106 2892 2233 183 38 115 chr5 43288481 43288710 -159796822 + L1MA1 LINE L1 5104 5349 -953 3448 145 28 76 chr5 43288710 43289436 -159796096 + LTR8 LTR ERV1 1 691 0 2233 183 38 115 chr5 43289436 43290234 -159795298 + L1MA1 LINE L1 5349 6029 -273 * 3623 149 5 7 chr5 43289706 43290295 -159795237 + L1PB4 LINE L1 5493 6080 -76 401 288 82 0 chr5 43290342 43290512 -159795020 + MIR SINE MIR 52 235 -27 25 95 0 0 chr5 43290566 43290640 -159794892 + AT_rich Low_complexity Low_complexity 1 74 0 939 152 0 0 chr5 43290971 43291109 -159794423 - AluJo SINE Alu -174 138 1 485 202 39 47 chr5 43291559 43291688 -159793844 - MIR3 SINE MIR -6 202 75 425 256 56 12 chr5 43292548 43292708 -159792824 + MIR SINE MIR 21 187 -75 258 32 0 0 chr5 43292905 43292936 -159792596 + (TG)n Simple_repeat Simple_repeat 2 32 0 183 184 0 0 chr5 43294999 43295037 -159790495 + (TG)n Simple_repeat Simple_repeat 2 39 0 687 234 5 31 chr5 43296634 43296826 -159788706 - L2 LINE L2 0 3313 3127 259 246 29 0 chr5 43296889 43296958 -159788574 - L2 LINE L2 -348 2924 2854 208 164 16 82 chr5 43297039 43297100 -159788432 - L2 LINE L2 -8 3264 3208 44110 32 21 1 chr5 43297202 43303236 -159782296 - L1PA3 LINE L1 0 6155 1 350 21 21 0 chr5 43303395 43303442 -159782090 + (TG)n Simple_repeat Simple_repeat 1 48 0 491 302 25 20 chr5 43304035 43304237 -159781295 - L3 LINE CR1 -125 1452 1250 2225 119 3 0 chr5 43304295 43304598 -159780934 + AluSx SINE Alu 1 304 -8 29 0 0 0 chr5 43304598 43304627 -159780905 + AT_rich Low_complexity Low_complexity 1 29 0 2080 89 65 14 chr5 43304796 43305089 -159780443 - AluSx SINE Alu -4 308 1 967 177 6 11 chr5 43305097 43305272 -159780260 - FRAM SINE Alu -2 174 1 288 298 137 3 chr5 43306577 43306737 -159778795 + MIR SINE MIR 37 215 -47 404 280 33 23 chr5 43308234 43308407 -159777125 + MIR SINE MIR 20 190 -62 196 305 0 0 chr5 43308899 43308958 -159776574 - L2 LINE L2 -213 3059 3001 1223 188 131 25 chr5 43308963 43309271 -159776261 + MLT1A1 LTR MaLR 1 374 0 1923 49 4 8 chr5 43309294 43309538 -159775994 + L1PA7 LINE L1 5910 6152 -2 550 250 64 17 chr5 43310231 43310403 -159775129 + MIR3 SINE MIR 1 180 -28 194 337 12 47 chr5 43310422 43310508 -159775024 + L3b LINE CR1 1370 1452 -131 591 317 31 9 chr5 43310562 43310786 -159774746 - MIR SINE MIR -30 232 4 636 257 0 0 chr5 43311079 43311223 -159774309 - MIR SINE MIR -10 252 109 279 0 0 0 chr5 43311778 43311809 -159773723 + (TG)n Simple_repeat Simple_repeat 2 32 0 586 279 91 72 chr5 43312906 43313432 -159772100 + L1MD3 LINE L1 5324 5619 -551 22 56 0 0 chr5 43313729 43313765 -159771767 + AT_rich Low_complexity Low_complexity 1 36 0 291 167 17 0 chr5 43313771 43313831 -159771701 - MIR3 SINE MIR -11 197 137 3457 189 11 29 chr5 43313858 43314620 -159770912 + L1MB1 LINE L1 3295 4042 -2104 3345 181 22 40 chr5 43314622 43314891 -159770641 + L1MB1 LINE L1 5264 5536 -632 341 109 18 0 chr5 43314891 43314946 -159770586 + HSMAR2 DNA Mariner 647 702 -600 3345 181 22 40 chr5 43314946 43315569 -159769963 + L1MB1 LINE L1 5536 6163 -5 222 340 10 19 chr5 43317432 43317535 -159767997 + MER5A DNA MER1_type 88 189 0 463 237 40 40 chr5 43318097 43318249 -159767283 + MIR SINE MIR 35 186 -76 2250 125 0 0 chr5 43318752 43319057 -159766475 + AluSx SINE Alu 1 305 -7 430 251 106 22 chr5 43319325 43319516 -159766016 + MIR SINE MIR 3 206 -56 254 188 0 87 chr5 43319561 43319630 -159765902 - MLT1I LTR MaLR 0 409 347 548 216 18 0 chr5 43319761 43319872 -159765660 - MLT1I LTR MaLR -270 139 27 981 235 5 5 chr5 43320657 43320870 -159764662 - MIR SINE MIR -26 236 24 1509 139 118 113 chr5 43321819 43322244 -159763288 - MSTA LTR MaLR -1 427 1 205 344 50 53 chr5 43322599 43322919 -159762613 + L2 LINE L2 2163 2481 -833 361 302 161 10 chr5 43323027 43323219 -159762313 + MIR SINE MIR 36 256 -6 343 336 26 17 chr5 43323308 43323424 -159762108 - L2 LINE L2 -13 3259 3143 183 353 68 48 chr5 43323429 43323636 -159761896 + L2 LINE L2 2648 2858 -456 402 195 41 81 chr5 43323896 43324019 -159761513 - LTR33 LTR ERVL -27 494 377 1973 145 3 10 chr5 43324148 43324445 -159761087 + AluSx SINE Alu 1 295 -17 314 344 34 46 chr5 43324623 43325096 -159760436 + HERVL LTR ERVL 1216 1724 -4040 437 301 161 18 chr5 43326091 43326434 -159759098 + HERVL LTR ERVL 1893 2273 -3381 2449 74 3 0 chr5 43326515 43326825 -159758707 + AluY SINE Alu 1 311 0 343 221 0 0 chr5 43326856 43326924 -159758608 + MIR SINE MIR 137 204 -58 384 303 69 29 chr5 43327089 43327264 -159758268 + HERVL LTR ERVL 2847 3028 -2736 806 308 54 7 chr5 43327398 43327674 -159757858 + HERVL LTR ERVL 3191 3479 -2285 1248 289 104 27 chr5 43327690 43328312 -159757220 + HERVL LTR ERVL 3396 4065 -1699 455 317 60 53 chr5 43328392 43328673 -159756859 + HERVL LTR ERVL 4305 4587 -1177 842 224 130 27 chr5 43328759 43328982 -159756550 + MLT1I LTR MaLR 99 344 -65 470 194 14 22 chr5 43329026 43329165 -159756367 + CT-rich Low_complexity Low_complexity 1 138 0 403 272 78 32 chr5 43329436 43329653 -159755879 + LTR33A LTR ERVL 297 523 0 239 240 30 27 chr5 43330235 43330320 -159755212 - MIR SINE MIR -101 107 22 642 297 35 0 chr5 43331370 43331572 -159753960 - MIR SINE MIR 0 262 54 8181 146 13 21 chr5 43332688 43333551 -159751981 + HSMAR2 DNA Mariner 1 851 -451 1816 109 31 4 chr5 43333551 43333807 -159751725 + AluSc SINE Alu 28 290 -19 8181 146 13 21 chr5 43333807 43334255 -159751277 + HSMAR2 DNA Mariner 851 1301 -1 203 323 10 21 chr5 43334532 43334628 -159750904 + CT-rich Low_complexity Low_complexity 3 97 0 493 260 24 4 chr5 43335196 43335349 -159750183 - MLT1H LTR MaLR -265 170 21 219 283 28 75 chr5 43335598 43335704 -159749828 + MIR3 SINE MIR 87 187 -21 421 231 16 33 chr5 43335935 43336056 -159749476 + MLT1I LTR MaLR 273 391 -18 221 341 72 0 chr5 43336145 43336254 -159749278 + MIR SINE MIR 38 152 -67 278 351 44 0 chr5 43336381 43336495 -159749037 - MIR SINE MIR -78 184 66 276 296 217 17 chr5 43337140 43337255 -159748277 + MER5A DNA MER1_type 46 183 -6 919 240 81 0 chr5 43337327 43337548 -159747984 + L1MB1 LINE L1 5925 6163 -5 250 178 55 0 chr5 43337628 43337701 -159747831 + CT-rich Low_complexity Low_complexity 4 80 0 718 272 135 30 chr5 43338430 43338916 -159746616 + L2 LINE L2 2750 3282 -31 413 254 123 0 chr5 43338944 43339066 -159746466 - MIR SINE MIR -20 242 106 1258 217 14 0 chr5 43339132 43339353 -159746179 + MER58A DNA MER1_type 1 224 0 224 373 29 0 chr5 43339502 43339604 -159745928 + MIR SINE MIR 33 137 -71 195 162 0 0 chr5 43339620 43339657 -159745875 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1134 273 50 43 chr5 43339840 43340239 -159745293 + MLT1I LTR MaLR 6 407 -2 4070 59 0 0 chr5 43340832 43341000 -159744532 + L1PA12 LINE L1 5329 5487 -681 4070 108 0 2 chr5 43341000 43341547 -159743985 + L1PA12 LINE L1 5621 6168 0 4070 59 0 0 chr5 43341547 43341587 -159743945 + L1PA12 LINE L1 5487 6168 0 1294 195 79 41 chr5 43342814 43343157 -159742375 - MLT1A1 LTR MaLR 0 365 10 30 0 0 0 chr5 43343321 43343351 -159742181 + AT_rich Low_complexity Low_complexity 1 30 0 274 352 38 0 chr5 43344325 43344430 -159741102 - MIR SINE MIR -68 140 32 1371 121 97 0 chr5 43344454 43344661 -159740871 + MER30 DNA MER1_type 4 230 0 388 319 39 44 chr5 43346434 43346616 -159738916 - MER5A DNA MER1_type -2 187 7 222 306 0 14 chr5 43346897 43346969 -159738563 + MIR3 SINE MIR 90 160 -48 2038 117 13 7 chr5 43347096 43347394 -159738138 + AluSg SINE Alu 1 300 -10 846 256 22 22 chr5 43347435 43347658 -159737874 + MLT1G1 LTR MaLR 3 225 -370 1006 307 95 34 chr5 43347685 43348326 -159737206 - L2 LINE L2 -556 2758 2079 1701 200 10 4 chr5 43348331 43348720 -159736812 - MER39 LTR ERV1 -7 700 271 365 335 85 18 chr5 43348802 43349083 -159736449 - L2 LINE L2 -1586 1728 1429 17588 33 0 2 chr5 43349550 43351060 -159734472 + L1PA4 LINE L1 3387 4881 -1274 2357 89 3 0 chr5 43351060 43351362 -159734170 + AluY SINE Alu 1 303 -8 17588 33 0 2 chr5 43351362 43352629 -159732903 + L1PA4 LINE L1 4881 6149 -6 207 191 0 43 chr5 43352759 43352806 -159732726 + GA-rich Low_complexity Low_complexity 1 45 0 195 186 0 0 chr5 43353099 43353142 -159732390 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1683 144 107 0 chr5 43353211 43353474 -159732058 - AluSp SINE Alu -22 291 1 1504 176 37 34 chr5 43353733 43354028 -159731504 - AluJo SINE Alu -16 296 1 511 263 126 17 chr5 43354226 43354401 -159731131 + MIR SINE MIR 9 202 -60 231 177 81 0 chr5 43354465 43354527 -159731005 + GA-rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr5 43355288 43355309 -159730223 + AT_rich Low_complexity Low_complexity 1 21 0 870 182 113 86 chr5 43356630 43356921 -159728611 + MLT1J2 LTR MaLR 7 305 -145 1659 204 76 39 chr5 43356921 43356979 -159728553 + Charlie4a DNA MER1_type 21 75 -1886 2458 76 0 0 chr5 43356979 43357281 -159728251 + AluY SINE Alu 1 302 -9 1659 204 76 39 chr5 43357281 43357684 -159727848 + Charlie4a DNA MER1_type 75 499 -9 322 244 16 114 chr5 43357699 43357822 -159727710 + MLT1J2 LTR MaLR 267 377 -73 229 265 168 34 chr5 43358947 43359270 -159726262 - L1ME4a LINE L1 -114 6007 5650 21 0 0 0 chr5 43359329 43359350 -159726182 + AT_rich Low_complexity Low_complexity 1 21 0 382 259 19 71 chr5 43359683 43359901 -159725631 + MIR3 SINE MIR 2 251 -11 343 350 50 0 chr5 43359946 43360066 -159725466 + L2 LINE L2 3187 3312 -1 271 279 0 15 chr5 43360577 43360645 -159724887 + MIR3 SINE MIR 139 205 -3 2473 123 18 39 chr5 43361564 43361946 -159723586 + THE1C LTR MaLR 1 374 -1 11483 107 9 29 chr5 43361947 43363559 -159721973 + THE1C-int LTR MaLR 1 1580 0 2523 114 13 42 chr5 43363559 43363945 -159721587 + THE1C LTR MaLR 1 375 0 1140 219 37 0 chr5 43364040 43364255 -159721277 + MER58A DNA MER1_type 2 224 0 1706 176 24 7 chr5 43364504 43364799 -159720733 - AluJo SINE Alu -10 302 3 201 354 53 18 chr5 43364981 43365094 -159720438 - MIR SINE MIR -95 167 51 234 0 0 0 chr5 43365176 43365202 -159720330 + (T)n Simple_repeat Simple_repeat 1 26 0 1334 270 94 11 chr5 43366520 43366894 -159718638 - MLT1I LTR MaLR -4 405 1 721 249 13 16 chr5 43367026 43367203 -159718329 - MER5B DNA MER1_type -4 185 1 407 279 16 39 chr5 43367211 43367234 -159718298 + MIR3 SINE MIR 19 41 -167 2075 114 3 20 chr5 43367234 43367582 -159717950 - AluSq SINE Alu 0 313 3 407 279 16 39 chr5 43367582 43367732 -159717800 + MIR3 SINE MIR 41 193 -15 257 223 116 33 chr5 43368776 43368897 -159716635 + L1ME4a LINE L1 5984 6114 -7 439 221 21 0 chr5 43368910 43369005 -159716527 + MIR SINE MIR 84 180 -82 296 272 0 12 chr5 43369008 43369089 -159716443 + MER116 DNA Mariner 1 80 0 622 230 63 11 chr5 43369246 43369420 -159716112 - L1ME1 LINE L1 -49 6117 5935 1990 123 0 3 chr5 43369781 43370105 -159715427 + AluSx SINE Alu 1 323 0 303 341 0 0 chr5 43370687 43370816 -159714716 + MIR SINE MIR 10 138 -124 292 264 60 54 chr5 43370847 43371014 -159714518 + L2 LINE L2 2897 3064 -208 1071 281 12 0 chr5 43371099 43371352 -159714180 - MIR SINE MIR -2 260 5 477 264 200 0 chr5 43371387 43371542 -159713990 - MER5A DNA MER1_type 0 189 4 720 191 79 11 chr5 43371574 43371752 -159713780 - Charlie1b DNA MER1_type -15 508 319 * 820 255 10 10 chr5 43371748 43371944 -159713588 - Charlie1b DNA MER1_type -327 196 1 293 0 27 0 chr5 43372110 43372147 -159713385 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2132 67 10 67 chr5 43372149 43372449 -159713083 - AluSp SINE Alu -30 283 1 321 203 29 14 chr5 43373120 43373189 -159712343 - L3 LINE CR1 -3 1574 1505 * 400 194 61 0 chr5 43373177 43373275 -159712257 + MER5A DNA MER1_type 9 112 -77 952 219 6 6 chr5 43373460 43373638 -159711894 + MER5B DNA MER1_type 1 178 0 2395 94 10 0 chr5 43374659 43374966 -159710566 + AluSg SINE Alu 1 310 0 24 53 0 0 chr5 43375020 43375058 -159710474 + AT_rich Low_complexity Low_complexity 1 38 0 2790 148 40 23 chr5 43375382 43375861 -159709671 - L1MB1 LINE L1 0 6168 5682 28 0 0 0 chr5 43376183 43376211 -159709321 + AT_rich Low_complexity Low_complexity 1 28 0 651 167 28 0 chr5 43376489 43376597 -159708935 - LTR8 LTR ERV1 -107 584 474 184 330 170 0 chr5 43377128 43377240 -159708292 - MIR3 SINE MIR -1 207 77 1156 156 19 28 chr5 43378171 43378383 -159707149 + L1PA16 LINE L1 5947 6156 -10 371 0 68 0 chr5 43378695 43378754 -159706778 + (TG)n Simple_repeat Simple_repeat 2 64 0 392 335 28 16 chr5 43378925 43379107 -159706425 - MIR3 SINE MIR -15 193 10 2029 138 7 13 chr5 43379805 43380109 -159705423 - AluSq SINE Alu -11 302 1 272 202 70 70 chr5 43380119 43380233 -159705299 - L1MC/D LINE L1 -1988 5820 5707 3195 234 61 17 chr5 43380844 43381902 -159703630 + L1ME3A LINE L1 4962 6077 -93 203 382 54 43 chr5 43382067 43382253 -159703279 + L2 LINE L2 3073 3260 -12 479 234 42 72 chr5 43382377 43382544 -159702988 + L1ME3A LINE L1 6003 6164 -6 717 291 113 17 chr5 43382575 43382929 -159702603 + L1MC4a LINE L1 5477 5864 -1944 211 197 0 82 chr5 43384025 43384086 -159701446 - MIR SINE MIR -137 71 16 691 268 112 22 chr5 43384101 43384325 -159701207 + MIR SINE MIR 18 261 -1 275 370 54 0 chr5 43384438 43384641 -159700891 + L3 LINE CR1 1357 1570 -7 21 36 0 0 chr5 43388384 43388412 -159697120 + AT_rich Low_complexity Low_complexity 1 28 0 831 293 63 0 chr5 43389047 43389286 -159696246 - MIR SINE MIR -1 261 8 234 243 206 28 chr5 43389771 43389878 -159695654 - MIR SINE MIR -62 146 21 3429 210 69 43 chr5 43390063 43390887 -159694645 - L1ME1 LINE L1 -5 6161 5282 2014 147 0 0 chr5 43390887 43391187 -159694345 + AluSx SINE Alu 2 301 -11 3429 210 69 43 chr5 43391187 43391551 -159693981 - L1ME1 LINE L1 -884 5282 4929 206 284 86 25 chr5 43393513 43393594 -159691938 + MER5A DNA MER1_type 97 182 -7 370 317 35 35 chr5 43393935 43394137 -159691395 + MIR SINE MIR 15 216 -46 197 268 24 61 chr5 43394135 43394217 -159691315 + L3b LINE CR1 1155 1233 -350 * 361 267 63 84 chr5 43395862 43396053 -159689479 - MLT1J2 LTR MaLR 0 450 264 276 234 6 6 chr5 43396136 43396229 -159689303 - MLT1J1 LTR MaLR -331 119 26 1506 155 39 28 chr5 43396608 43396922 -159688610 + AluJb SINE Alu 1 312 0 2573 62 0 0 chr5 43397189 43397495 -159688037 - AluY SINE Alu -5 306 1 339 308 63 31 chr5 43398309 43398468 -159687064 + MIR SINE MIR 29 192 -70 250 388 89 28 chr5 43399221 43399579 -159685953 + L2 LINE L2 2866 3245 -27 312 83 0 0 chr5 43400455 43400503 -159685029 + (TG)n Simple_repeat Simple_repeat 2 49 0 1950 266 32 42 chr5 43400651 43401248 -159684284 + L1MA8 LINE L1 469 1059 -6430 17340 175 31 19 chr5 43401325 43403705 -159681827 + L1MA8 LINE L1 1897 4246 -3464 1491 365 64 6 chr5 43403705 43404047 -159681485 - THE1B LTR MaLR -2 362 1 17340 175 31 19 chr5 43404047 43406187 -159679345 + L1MA8 LINE L1 4246 6503 -1207 2316 107 3 0 chr5 43406187 43406485 -159679047 - AluSx SINE Alu -13 299 1 17340 175 31 19 chr5 43406485 43407707 -159677825 + L1MA8 LINE L1 6503 7708 -2 937 291 86 30 chr5 43408000 43408491 -159677041 + LTR33 LTR ERVL 3 520 -1 627 162 45 0 chr5 43408798 43408909 -159676623 + L1MB1 LINE L1 6047 6162 -6 856 118 0 154 chr5 43409002 43409223 -159676309 - MER53 DNA DNA -2 187 1 236 352 16 32 chr5 43409335 43409460 -159676072 + MIR SINE MIR 22 144 -118 1237 249 97 20 chr5 43409917 43410307 -159675225 - LTR16C LTR ERVL 0 491 72 1487 167 65 36 chr5 43410531 43410834 -159674698 - AluJb SINE Alu 0 311 1 532 290 116 20 chr5 43411154 43411399 -159674133 - MIR3 SINE MIR 0 262 16 869 267 0 31 chr5 43412004 43412229 -159673303 - MER58A DNA MER1_type -3 221 4 2159 131 74 6 chr5 43413304 43413655 -159671877 - THE1C LTR MaLR 0 375 1 276 257 42 69 chr5 43413831 43413975 -159671557 - MIR SINE MIR -24 238 99 383 243 48 95 chr5 43414840 43415057 -159670475 + MIR SINE MIR 33 245 -17 1890 166 0 0 chr5 43415067 43415369 -159670163 - AluJb SINE Alu -10 302 1 711 282 125 18 chr5 43417134 43417414 -159668118 - MLT1I LTR MaLR 0 409 100 464 223 93 7 chr5 43417680 43417819 -159667713 - MIR SINE MIR -3 259 109 262 246 0 18 chr5 43417819 43417876 -159667656 - LTR16C LTR ERVL 0 491 436 475 279 92 26 chr5 43417919 43418148 -159667384 - LTR16C LTR ERVL -150 341 98 2259 40 20 20 chr5 43418559 43418857 -159666675 + AluY SINE Alu 3 300 -11 183 289 0 0 chr5 43418941 43418979 -159666553 + L2 LINE L2 3149 3186 -86 325 284 33 93 chr5 43420998 43421181 -159664351 + MIR SINE MIR 32 203 -59 316 272 0 96 chr5 43421778 43421903 -159663629 - MLT1H LTR MaLR -10 539 427 240 306 0 0 chr5 43422166 43422228 -159663304 - MLT1I LTR MaLR -290 119 58 2080 106 3 30 chr5 43422605 43422907 -159662625 - AluSp SINE Alu -19 294 1 24 32 0 0 chr5 43423183 43423214 -159662318 + AT_rich Low_complexity Low_complexity 1 31 0 204 40 0 0 chr5 43424086 43424111 -159661421 + (ATG)n Simple_repeat Simple_repeat 2 26 0 208 309 37 25 chr5 43424117 43424198 -159661334 - MIR SINE MIR -161 101 20 3030 202 119 27 chr5 43424257 43425095 -159660437 + L1MD3 LINE L1 7081 7995 0 578 268 15 82 chr5 43426440 43426492 -159659040 - MIR SINE MIR 0 262 208 1670 146 62 0 chr5 43426492 43426752 -159658780 - AluJb SINE Alu -3 309 34 578 268 15 82 chr5 43426752 43426968 -159658564 - MIR SINE MIR -54 208 12 1079 125 9 0 chr5 43427223 43427396 -159658136 + MSTB LTR MaLR 5 197 -260 682 192 26 64 chr5 43427476 43427632 -159657900 + MSTB LTR MaLR 149 298 -128 2478 228 178 63 chr5 43427642 43428176 -159657356 - L2 LINE L2 -4 3309 2838 2152 120 3 7 chr5 43428176 43428475 -159657057 - AluSx SINE Alu -14 298 1 2478 228 178 63 chr5 43428475 43429407 -159656125 - L2 LINE L2 -475 2838 1671 2108 128 10 0 chr5 43429759 43430056 -159655476 + AluSx SINE Alu 1 300 -12 531 293 63 11 chr5 43430141 43430315 -159655217 + MIR SINE MIR 24 206 -56 2055 115 37 7 chr5 43431766 43432062 -159653470 + AluSq SINE Alu 6 310 -3 2995 247 181 28 chr5 43432064 43433374 -159652158 + HAL1 LINE L1 210 1720 -787 746 122 9 0 chr5 43433684 43433791 -159651741 - AluSg/x SINE Alu -9 303 196 189 0 0 0 chr5 43433792 43433813 -159651719 + (T)n Simple_repeat Simple_repeat 1 21 0 848 214 0 7 chr5 43433825 43433979 -159651553 + FRAM SINE Alu 1 152 -24 2507 52 0 7 chr5 43433988 43434293 -159651239 + AluY SINE Alu 1 303 -8 1832 153 14 0 chr5 43435219 43435500 -159650032 + AluSx SINE Alu 1 285 -27 214 318 47 12 chr5 43436198 43436283 -159649249 + MIR3 SINE MIR 87 174 -34 947 239 59 0 chr5 43436344 43436566 -159648966 + MIR SINE MIR 25 259 -3 378 0 0 0 chr5 43436644 43436686 -159648846 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2002 110 0 39 chr5 43436700 43436982 -159648550 - AluSx SINE Alu -37 275 5 369 307 64 72 chr5 43436982 43437225 -159648307 + L2 LINE L2 2918 3160 -112 613 76 0 13 chr5 43437344 43437423 -159648109 + MER30 DNA MER1_type 1 78 -152 288 186 0 100 chr5 43437601 43437671 -159647861 + MER30 DNA MER1_type 168 230 0 451 294 75 0 chr5 43437681 43437827 -159647705 + MIR SINE MIR 68 224 -38 2020 192 90 0 chr5 43439300 43439733 -159645799 + Charlie4a DNA MER1_type 28 499 -9 916 193 5 96 chr5 43439753 43439971 -159645561 - MER58A DNA MER1_type 0 224 27 600 203 34 51 chr5 43441133 43441310 -159644222 - MER112 DNA MER1_type -70 190 17 399 227 22 138 chr5 43441496 43441765 -159643767 - MER112 DNA MER1_type -6 254 17 314 299 108 52 chr5 43441778 43442066 -159643466 - L3 LINE CR1 -54 1523 1220 188 321 136 0 chr5 43442565 43442646 -159642886 + MIR3 SINE MIR 69 160 -48 227 225 0 0 chr5 43442781 43442821 -159642711 + MIR3 SINE MIR 150 189 -19 713 203 8 0 chr5 43443077 43443200 -159642332 - AluJb SINE Alu -7 305 182 1441 126 126 50 chr5 43443202 43443480 -159642052 - AluJo SINE Alu -8 304 6 637 195 54 87 chr5 43444717 43444902 -159640630 + MIR SINE MIR 63 241 -21 1252 187 75 13 chr5 43445057 43445362 -159640170 - MER33 DNA MER1_type 0 324 1 632 250 149 16 chr5 43445415 43445623 -159639909 - MIR SINE MIR 0 262 35 204 156 67 0 chr5 43446926 43446971 -159638561 - MER5A DNA MER1_type -18 171 124 327 146 0 0 chr5 43447533 43447588 -159637944 + (CA)n Simple_repeat Simple_repeat 2 56 0 2127 96 0 57 chr5 43448078 43448392 -159637140 - AluSg SINE Alu -14 296 1 848 214 0 7 chr5 43448401 43448555 -159636977 - FRAM SINE Alu -24 152 1 1072 315 9 39 chr5 43448738 43449173 -159636359 + ERVL LTR ERVL 1345 1766 -3998 189 0 0 0 chr5 43449330 43449351 -159636181 + (GCCTG)n Simple_repeat Simple_repeat 2 22 0 797 261 88 86 chr5 43449605 43450123 -159635409 + MLT1G1 LTR MaLR 30 588 -7 2691 116 16 5 chr5 43450165 43450536 -159634996 + THE1C LTR MaLR 1 375 0 604 255 62 31 chr5 43451363 43451555 -159633977 + MIR SINE MIR 20 217 -45 208 205 0 0 chr5 43451760 43451799 -159633733 + MER91 DNA MER1_type 1 39 -151 1868 184 125 10 chr5 43451881 43452272 -159633260 - MER63B DNA MER1_type 0 436 1 569 263 129 26 chr5 43453169 43453401 -159632131 + MIR SINE MIR 7 262 0 3100 123 72 4 chr5 43454007 43454509 -159631023 - L1MA8 LINE L1 -10 6281 5746 319 211 109 54 chr5 43454914 43455061 -159630471 + MIR SINE MIR 73 227 -35 * 596 248 0 75 chr5 43455043 43455158 -159630374 + MIR SINE MIR 14 115 -147 2447 61 3 0 chr5 43455158 43455454 -159630078 - AluY SINE Alu -14 297 1 596 248 0 75 chr5 43455454 43455499 -159630033 + MIR SINE MIR 115 162 -100 440 272 99 72 chr5 43455664 43455720 -159629812 - L1ME4a LINE L1 0 6121 6068 2046 132 0 13 chr5 43455720 43456024 -159629508 + AluSx SINE Alu 1 300 -12 440 272 99 72 chr5 43456024 43456523 -159629009 - L1ME4a LINE L1 -53 6068 5551 391 280 67 64 chr5 43457009 43457291 -159628241 - L1ME4a LINE L1 -1111 5035 4753 928 281 133 0 chr5 43457663 43457948 -159627584 + MLT1I LTR MaLR 85 407 -2 450 189 186 50 chr5 43458523 43458708 -159626824 + MIR SINE MIR 19 222 -40 2215 122 0 3 chr5 43458708 43459011 -159626521 + AluSx SINE Alu 1 302 -10 450 189 186 50 chr5 43459011 43459026 -159626506 + MIR SINE MIR 222 234 -28 22 0 0 0 chr5 43459048 43459070 -159626462 + AT_rich Low_complexity Low_complexity 1 22 0 662 236 73 16 chr5 43459297 43459488 -159626044 + MIR SINE MIR 39 240 -22 248 333 43 0 chr5 43460033 43460150 -159625382 + MIR SINE MIR 84 205 -57 313 113 57 24 chr5 43461168 43461292 -159624240 + (CTATA)n Simple_repeat Simple_repeat 3 130 0 193 67 22 44 chr5 43461392 43461437 -159624095 + (CTATA)n Simple_repeat Simple_repeat 2 45 0 1581 109 53 12 chr5 43461475 43461722 -159623810 - AluSx SINE Alu -55 257 1 456 239 62 0 chr5 43462349 43462462 -159623070 - L2 LINE L2 -2 3311 3192 224 270 79 48 chr5 43462540 43462666 -159622866 - L2 LINE L2 -907 2407 2278 320 321 36 29 chr5 43463003 43463143 -159622389 + MIR3 SINE MIR 2 142 -66 707 212 47 35 chr5 43463163 43463333 -159622199 + MER5A DNA MER1_type 18 189 0 257 228 13 0 chr5 43463484 43463563 -159621969 + (TG)n Simple_repeat Simple_repeat 1 80 0 3445 117 24 22 chr5 43463861 43464365 -159621167 - MER1A DNA MER1_type -6 523 19 1420 292 70 54 chr5 43464726 43465408 -159620124 - MER115 DNA AcHobo 0 693 1 1974 142 30 0 chr5 43466685 43466981 -159618551 + AluSx SINE Alu 1 305 -7 242 287 35 0 chr5 43467665 43467752 -159617780 + MER117 DNA MER1_type 3 92 -105 298 303 153 18 chr5 43467798 43468125 -159617407 - L2 LINE L2 -850 2464 2094 277 146 0 0 chr5 43468178 43468219 -159617313 + MIR SINE MIR 111 151 -111 556 314 50 4 chr5 43468231 43468470 -159617062 + HAL1 LINE L1 2 251 -2256 245 242 81 0 chr5 43468598 43468660 -159616872 - L1ME LINE L1 -373 5793 5727 39 84 0 0 chr5 43468823 43468918 -159616614 + AT_rich Low_complexity Low_complexity 1 95 0 2204 73 28 7 chr5 43469423 43469709 -159615823 - AluY SINE Alu -19 292 1 2332 95 3 0 chr5 43469719 43470015 -159615517 - AluSx SINE Alu -15 297 1 1094 194 7 73 chr5 43470523 43470796 -159614736 - L1MD3 LINE L1 0 7995 7741 601 290 86 67 chr5 43470840 43470946 -159614586 - L1ME LINE L1 -334 5787 5685 2055 119 176 19 chr5 43470946 43471316 -159614216 - MSTA LTR MaLR 0 428 1 601 290 86 67 chr5 43471316 43471734 -159613798 - L1ME LINE L1 -436 5685 5257 29 0 0 0 chr5 43471842 43471871 -159613661 + AT_rich Low_complexity Low_complexity 1 29 0 1521 184 11 14 chr5 43471920 43472238 -159613294 + AluJo SINE Alu 4 320 0 219 291 9 55 chr5 43472406 43472516 -159613016 + L2 LINE L2 2393 2497 -817 243 200 33 17 chr5 43473466 43473526 -159612006 + LTR33A LTR ERVL 463 523 0 3034 124 63 2 chr5 43473989 43474449 -159611083 - L1MC1 LINE L1 -1 6332 5845 3405 126 21 11 chr5 43474639 43475196 -159610336 - L1MC1 LINE L1 -489 5844 5282 * 6453 80 5 12 chr5 43475179 43475364 -159610168 - L1PA14 LINE L1 0 6161 5976 3703 118 8 4 chr5 43475364 43475873 -159609659 - MER9 LTR ERVK 0 511 1 6453 80 5 12 chr5 43475873 43476571 -159608961 - L1PA14 LINE L1 -185 5976 5285 975 165 6 39 chr5 43476723 43476905 -159608627 + MER2 DNA MER2_type 170 345 0 312 265 61 48 chr5 43476929 43477076 -159608456 + MER112 DNA MER1_type 93 241 -19 2044 163 33 3 chr5 43477089 43477426 -159608106 - MER7A DNA MER2_type 0 346 2 1928 107 19 4 chr5 43477520 43477782 -159607750 - AluSq SINE Alu -47 266 1 2257 110 0 0 chr5 43477794 43478094 -159607438 - AluSc SINE Alu -9 300 1 1706 142 48 52 chr5 43479627 43479772 -159605760 + AluJb SINE Alu 1 145 -167 1936 109 3 54 chr5 43479772 43480066 -159605466 + AluSx SINE Alu 21 299 -13 1706 142 48 52 chr5 43480066 43480230 -159605302 + AluJb SINE Alu 145 309 -3 896 311 89 12 chr5 43481527 43482100 -159603432 - L1ME3A LINE L1 -230 5940 5319 757 278 80 26 chr5 43482170 43482655 -159602877 - L1ME3A LINE L1 -875 5271 4760 2192 101 14 3 chr5 43482655 43482673 -159602859 - AluSx SINE Alu -12 300 284 324 0 0 0 chr5 43482673 43482709 -159602823 + (TG)n Simple_repeat Simple_repeat 1 36 0 2192 101 14 3 chr5 43482709 43482987 -159602545 - AluSx SINE Alu -28 284 1 1119 137 0 6 chr5 43483071 43483239 -159602293 - AluSx SINE Alu -17 295 129 5139 99 4 1 chr5 43483241 43483917 -159601615 - L1PA14 LINE L1 0 6161 5484 1884 42 0 0 chr5 43483987 43484199 -159601333 - L1PA5 LINE L1 -13 6141 5930 1010 62 86 0 chr5 43484200 43484328 -159601204 - AluSx SINE Alu -173 139 1 16830 135 19 57 chr5 43584361 43584917 -159500615 - L1PA12 LINE L1 -2753 4831 4255 2163 124 13 3 chr5 43584917 43585223 -159500309 - AluSc SINE Alu 0 309 1 16830 135 19 57 chr5 43585223 43587911 -159497621 - L1PA12 LINE L1 -3329 4255 485 21 36 0 0 chr5 43588448 43588476 -159497056 + AT_rich Low_complexity Low_complexity 1 28 0 1647 214 81 37 chr5 43589136 43589571 -159495961 + MSTB2 LTR MaLR 4 457 0 201 279 101 47 chr5 43589623 43589752 -159495780 - MIR3 SINE MIR -58 150 15 219 328 78 26 chr5 43590715 43590831 -159494701 + MER5A DNA MER1_type 64 185 -4 337 230 7 149 chr5 43593329 43593477 -159492055 - MIR3 SINE MIR -3 205 79 312 27 0 0 chr5 43593932 43593969 -159491563 + (CA)n Simple_repeat Simple_repeat 2 38 0 480 316 51 0 chr5 43594109 43594267 -159491265 - MIR SINE MIR -94 168 3 207 0 0 0 chr5 43595423 43595446 -159490086 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1968 94 20 0 chr5 43595480 43595735 -159489797 - AluSq SINE Alu -53 260 1 222 327 0 0 chr5 43596480 43596532 -159489000 - L2 LINE L2 -20 3293 3242 1989 139 171 29 chr5 43596594 43596757 -159488775 + MSTA LTR MaLR 1 140 -288 2108 110 0 26 chr5 43596757 43597067 -159488465 + AluSp SINE Alu 1 302 -11 1989 139 171 29 chr5 43597067 43597278 -159488254 + MSTA LTR MaLR 140 428 0 463 312 129 58 chr5 43597665 43597816 -159487716 - L2 LINE L2 -572 2742 2603 2316 120 133 13 chr5 43597816 43598198 -159487334 - MSTA LTR MaLR 0 428 1 463 312 129 58 chr5 43598198 43598767 -159486765 - L2 LINE L2 -711 2603 1971 224 135 0 19 chr5 43598894 43598946 -159486586 + (TAAAAA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 43599244 43599266 -159486266 + AT_rich Low_complexity Low_complexity 1 22 0 1802 118 0 4 chr5 43599326 43599581 -159485951 + AluSx SINE Alu 1 254 -58 1430 218 104 47 chr5 43599681 43600318 -159485214 + L1MC5 LINE L1 7254 7926 -35 2268 100 3 3 chr5 43600503 43600802 -159484730 + AluSg SINE Alu 1 299 -11 1834 155 3 24 chr5 43602255 43602552 -159482980 + AluSx SINE Alu 1 291 -21 2324 185 59 27 chr5 43602980 43603423 -159482109 - MSTB2 LTR MaLR 0 457 1 250 349 0 12 chr5 43604326 43604412 -159481120 + MIR SINE MIR 20 104 -158 217 272 71 42 chr5 43604915 43605059 -159480473 + MIR3 SINE MIR 1 152 -96 203 152 0 0 chr5 43605334 43605367 -159480165 + (TG)n Simple_repeat Simple_repeat 2 34 0 467 298 16 0 chr5 43605524 43605645 -159479887 - L2 LINE L2 -8 3305 3183 781 255 33 127 chr5 43606944 43607465 -159478067 - MARNA DNA Mariner -39 547 76 21 57 0 0 chr5 43607831 43607866 -159477666 + AT_rich Low_complexity Low_complexity 1 35 0 1645 166 0 58 chr5 43607901 43608214 -159477318 - AluJb SINE Alu -17 295 1 844 134 0 0 chr5 43608737 43608856 -159476676 - AluSg/x SINE Alu -8 302 184 1026 157 0 76 chr5 43608961 43609029 -159476503 + L1PB3 LINE L1 5971 6043 -111 2164 126 0 0 chr5 43609029 43609331 -159476201 + AluSc SINE Alu 1 302 -7 1026 157 0 76 chr5 43609331 43609460 -159476072 + L1PB3 LINE L1 6043 6153 -1 266 118 39 0 chr5 43609480 43609531 -159476001 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2181 198 73 44 chr5 43610244 43610749 -159474783 - MLT2B1 LTR ERVL 0 520 1 206 368 63 21 chr5 43611045 43611235 -159474297 + MIR3 SINE MIR 7 204 -4 187 352 113 0 chr5 43611252 43611394 -159474138 - MIR SINE MIR -16 246 89 806 334 32 16 chr5 43611826 43612432 -159473100 - L1MC4a LINE L1 -1922 5886 5276 26 74 0 0 chr5 43612539 43612593 -159472939 + AT_rich Low_complexity Low_complexity 1 54 0 400 266 102 33 chr5 43612687 43612991 -159472541 - L1MC4a LINE L1 -1444 4702 4378 264 278 153 14 chr5 43613235 43613379 -159472153 - L1MC4a LINE L1 -2409 3737 3574 517 288 116 64 chr5 43613410 43613737 -159471795 + L2 LINE L2 2384 2727 -587 2595 174 51 14 chr5 43613740 43614233 -159471299 - LTR53 LTR ERVL -8 511 1 599 315 4 22 chr5 43614242 43614496 -159471036 + L2 LINE L2 2775 3023 -290 440 330 33 19 chr5 43614571 43614841 -159470691 - L1ME3A LINE L1 -284 5886 5613 266 256 0 26 chr5 43615430 43615508 -159470024 + CT-rich Low_complexity Low_complexity 3 78 0 501 262 35 21 chr5 43615938 43616083 -159469449 + MIR3 SINE MIR 19 165 -43 2255 101 0 10 chr5 43616089 43616387 -159469145 + AluSc SINE Alu 1 295 -14 251 364 83 8 chr5 43617371 43617503 -159468029 - MIR3 SINE MIR -64 144 3 244 242 152 20 chr5 43617582 43617681 -159467851 + LTR33A LTR ERVL 412 523 0 385 312 9 0 chr5 43617732 43617841 -159467691 - MIR3 SINE MIR -35 173 64 487 319 54 0 chr5 43617916 43618101 -159467431 + MIR SINE MIR 46 240 -22 1962 119 0 0 chr5 43618513 43618781 -159466751 - AluSg SINE Alu -9 301 34 920 289 141 5 chr5 43619168 43619566 -159465966 - LTR33 LTR ERVL -63 458 7 205 446 161 15 chr5 43621031 43621497 -159464035 + L2 LINE L2 2273 2806 -508 224 167 21 21 chr5 43622368 43622416 -159463116 + CT-rich Low_complexity Low_complexity 5 52 0 207 0 0 0 chr5 43622628 43622651 -159462881 + (TG)n Simple_repeat Simple_repeat 1 23 0 586 315 86 21 chr5 43622845 43623233 -159462299 + LTR16B LTR ERVL 5 464 0 1425 112 0 23 chr5 43623363 43623578 -159461954 + AluSq SINE Alu 1 210 -103 31 26 0 0 chr5 43624264 43624302 -159461230 + AT_rich Low_complexity Low_complexity 1 38 0 2197 79 14 0 chr5 43624302 43624579 -159460953 - AluSq SINE Alu -24 289 9 232 235 35 71 chr5 43625120 43625205 -159460327 - MIR SINE MIR -3 259 178 256 319 21 11 chr5 43625376 43625470 -159460062 - MIR SINE MIR -137 125 31 695 137 114 0 chr5 43627320 43627451 -159458081 - L1MA9 LINE L1 0 6312 6167 2632 181 19 72 chr5 43627594 43628236 -159457296 - LTR9 LTR ERV1 0 612 5 1965 107 8 0 chr5 43628508 43628770 -159456762 - AluSq SINE Alu -49 264 1 1997 54 149 4 chr5 43628835 43629096 -159456436 + AluY SINE Alu 1 299 -12 22 0 0 0 chr5 43629542 43629564 -159455968 + AT_rich Low_complexity Low_complexity 1 22 0 545 242 6 30 chr5 43629586 43629612 -159455920 - L1MA10 LINE L1 -1 6333 6308 1097 264 22 32 chr5 43629612 43629983 -159455549 - L1ME1 LINE L1 -14 6152 5786 1776 181 0 22 chr5 43630393 43630708 -159454824 - AluJo SINE Alu -4 308 1 187 203 156 0 chr5 43631871 43631935 -159453597 + L2 LINE L2 2976 3049 -223 22 56 0 0 chr5 43631992 43632028 -159453504 + AT_rich Low_complexity Low_complexity 1 36 0 507 317 97 34 chr5 43632230 43632580 -159452952 - MLT1K LTR MaLR -15 573 202 221 213 43 0 chr5 43632989 43633036 -159452496 + GA-rich Low_complexity Low_complexity 4 52 0 472 170 9 18 chr5 43633739 43633851 -159451681 + GA-rich Low_complexity Low_complexity 2 112 0 2387 99 3 3 chr5 43633986 43634299 -159451233 + AluSp SINE Alu 1 313 0 1580 157 0 12 chr5 43635793 43636035 -159449497 + AluJb SINE Alu 1 239 -73 320 188 16 0 chr5 43637224 43637288 -159448244 - L2 LINE L2 -1 3312 3248 328 321 154 37 chr5 43638288 43638469 -159447063 + L2 LINE L2 1294 1452 -1862 216 0 0 0 chr5 43638469 43638493 -159447039 + (CCCCCT)n Simple_repeat Simple_repeat 2 25 0 328 321 154 37 chr5 43638493 43638899 -159446633 + L2 LINE L2 1452 1991 -1323 2512 87 0 0 chr5 43638899 43639210 -159446322 - AluSx SINE Alu -1 311 1 328 321 154 37 chr5 43639210 43639374 -159446158 + L2 LINE L2 1991 2134 -1180 2186 120 3 3 chr5 43640442 43640743 -159444789 - AluSq SINE Alu -12 301 1 2349 212 2 5 chr5 43641372 43641797 -159443735 + MLT1F LTR MaLR 1 424 -118 587 165 9 28 chr5 43641854 43641963 -159443569 + MLT1F LTR MaLR 428 534 -8 412 301 58 34 chr5 43642006 43642352 -159443180 + LTR16A1 LTR ERVL 1 444 -6 1033 331 50 15 chr5 43642512 43642908 -159442624 + ERVL LTR ERVL 4026 4435 -1329 316 272 41 33 chr5 43643001 43643171 -159442361 + ERVL LTR ERVL 5162 5335 -204 969 298 37 45 chr5 43643255 43643701 -159441831 + LTR16A LTR ERVL 8 448 -2 2815 88 3 8 chr5 43644270 43644645 -159440887 - THE1C LTR MaLR 0 375 3 483 293 80 7 chr5 43644725 43645067 -159440465 + LTR33 LTR ERVL 12 430 -91 1535 157 68 23 chr5 43645524 43645844 -159439688 + MER61B LTR ERV1 1 423 -2 190 273 193 34 chr5 43645894 43646070 -159439462 - MIR SINE MIR -12 250 47 1203 110 0 0 chr5 43647335 43647510 -159438022 - AluSg/x SINE Alu 0 305 131 224 234 0 0 chr5 43648188 43648235 -159437297 + GA-rich Low_complexity Low_complexity 1 47 0 186 43 0 0 chr5 43648833 43648856 -159436676 + (TC)n Simple_repeat Simple_repeat 1 23 0 764 183 0 0 chr5 43649912 43650038 -159435494 + MSTB1 LTR MaLR 1 126 -306 2841 153 76 25 chr5 43650041 43650085 -159435447 - MER21A LTR ERV1 0 931 891 3593 187 57 7 chr5 43650085 43650784 -159434748 + MER50 LTR ERV1 1 734 0 2841 153 76 25 chr5 43650784 43651268 -159434264 - MER21A LTR ERV1 -40 891 376 1081 172 131 0 chr5 43651273 43651494 -159434038 - MER21A LTR ERV1 -667 264 15 2205 113 0 7 chr5 43651549 43651851 -159433681 - AluSx SINE Alu -12 300 1 4019 178 35 54 chr5 43651851 43652574 -159432958 - MER21A-int LTR ERV1 -3 4188 3485 478 0 32 0 chr5 43652574 43652636 -159432896 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 4019 178 35 54 chr5 43652636 43652839 -159432693 - MER21A-int LTR ERV1 -706 3485 3280 9971 173 14 33 chr5 43652850 43653376 -159432156 - MER21A-int LTR ERV1 -1258 2933 2399 2485 40 10 3 chr5 43653376 43653676 -159431856 + AluY SINE Alu 1 302 -9 9971 173 14 33 chr5 43653676 43654955 -159430577 - MER21A-int LTR ERV1 -1792 2399 1162 2281 80 13 20 chr5 43654963 43655263 -159430269 + AluY SINE Alu 13 310 -1 6196 152 12 17 chr5 43655350 43656384 -159429148 - MER4B-int LTR ERV1 -2646 4112 3085 2758 182 32 29 chr5 43656443 43656997 -159428535 - MER21A LTR ERV1 0 931 376 1300 166 72 0 chr5 43657002 43657237 -159428295 - MER21A LTR ERV1 -667 264 13 225 0 0 0 chr5 43657246 43657271 -159428261 + (TG)n Simple_repeat Simple_repeat 2 26 0 418 127 84 0 chr5 43657282 43657353 -159428179 + MSTB1 LTR MaLR 125 201 -231 17918 57 1 3 chr5 43657366 43659574 -159425958 + L1PA3 LINE L1 4 2205 -3941 22126 40 3 2 chr5 43659674 43662405 -159423127 + L1P LINE L1 788 3519 -2627 26509 27 11 9 chr5 43662505 43666410 -159419122 + L1PA3 LINE L1 2240 6152 -3 1349 148 38 13 chr5 43666436 43666672 -159418860 + MSTB1 LTR MaLR 188 429 -3 330 254 134 8 chr5 43666731 43666865 -159418667 - MIR SINE MIR -12 250 100 2300 86 30 3 chr5 43667252 43667554 -159417978 + AluSq SINE Alu 2 311 -2 293 372 60 30 chr5 43667784 43668053 -159417479 + L2 LINE L2 2543 2819 -495 1249 173 144 14 chr5 43668053 43668399 -159417133 - MER3 DNA MER1_type 0 2624 2234 526 209 9 17 chr5 43668402 43668517 -159417015 - MER3 DNA MER1_type -53 156 43 689 208 12 121 chr5 43668565 43668805 -159416727 - MIR SINE MIR -35 227 14 2346 193 94 106 chr5 43670599 43671211 -159414321 + L1ME1 LINE L1 35 656 -5740 3682 34 0 0 chr5 43671211 43671621 -159413911 - L1PA4 LINE L1 -3 6152 5743 2346 193 94 106 chr5 43671621 43672224 -159413308 + L1ME1 LINE L1 656 1265 -5131 874 289 44 77 chr5 43672233 43672777 -159412755 + MLT1E LTR MaLR 2 527 -66 1190 127 7 76 chr5 43672849 43673124 -159412408 + AluSx SINE Alu 55 310 -2 395 203 0 0 chr5 43673126 43673200 -159412332 + MLT1E LTR MaLR 492 565 -2 3546 239 55 20 chr5 43673201 43675054 -159410478 + L1ME1 LINE L1 1287 3170 -3045 614 200 82 0 chr5 43675057 43675192 -159410340 + L1ME1 LINE L1 4744 4889 -1326 2388 229 24 44 chr5 43675197 43675796 -159409736 + L1ME1 LINE L1 5577 6163 -72 198 0 0 0 chr5 43675796 43675818 -159409714 + (CA)n Simple_repeat Simple_repeat 2 23 0 2388 229 24 44 chr5 43675818 43675881 -159409651 + L1ME1 LINE L1 6163 6226 -9 216 0 0 0 chr5 43676803 43676827 -159408705 + (T)n Simple_repeat Simple_repeat 1 24 0 421 259 160 0 chr5 43677217 43677348 -159408184 - MIR SINE MIR -102 160 9 25 0 0 0 chr5 43677523 43677548 -159407984 + AT_rich Low_complexity Low_complexity 1 25 0 354 289 113 6 chr5 43679292 43679451 -159406081 + MIR SINE MIR 72 247 -15 563 285 67 6 chr5 43679483 43679648 -159405884 + MER45A DNA AcHobo 1 175 -3 373 198 93 0 chr5 43680036 43680122 -159405410 - MER69 DNA AcHobo 0 2526 2433 297 0 0 0 chr5 43680336 43680369 -159405163 + (TA)n Simple_repeat Simple_repeat 1 33 0 2312 101 7 3 chr5 43680369 43680677 -159404855 - AluSq SINE Alu -4 309 1 304 204 29 7 chr5 43680784 43680921 -159404611 + (TA)n Simple_repeat Simple_repeat 1 140 0 319 273 140 20 chr5 43681035 43681185 -159404347 - MIR3 SINE MIR -28 180 13 27 29 0 0 chr5 43681622 43681656 -159403876 + AT_rich Low_complexity Low_complexity 1 34 0 360 225 82 110 chr5 43681876 43681921 -159403611 + MER5B DNA MER1_type 2 47 -131 1917 156 0 0 chr5 43681921 43682216 -159403316 - AluSx SINE Alu -17 295 1 360 225 82 110 chr5 43682216 43682352 -159403180 + MER5B DNA MER1_type 47 178 0 1018 194 9 65 chr5 43682613 43682845 -159402687 - MER20 DNA MER1_type 0 219 1 211 259 71 12 chr5 43684824 43684909 -159400623 + MIR3 SINE MIR 109 198 -10 271 58 0 39 chr5 43685037 43685089 -159400443 + (GA)n Simple_repeat Simple_repeat 2 51 0 309 258 123 38 chr5 43685809 43685962 -159399570 + MIR SINE MIR 30 192 -67 1760 155 121 67 chr5 43686044 43686450 -159399082 + MSTA LTR MaLR 1 428 0 1811 123 55 22 chr5 43686521 43687050 -159398482 - MER4A LTR ERV1 0 664 1 816 217 28 46 chr5 43687060 43687277 -159398255 - MIR SINE MIR -40 222 10 3044 123 108 63 chr5 43687328 43687852 -159397680 + MER4B LTR ERV1 1 555 -55 2225 110 20 0 chr5 43687852 43688151 -159397381 - AluSx SINE Alu -7 305 1 3044 123 108 63 chr5 43688151 43688210 -159397322 + MER4B LTR ERV1 555 610 0 220 284 104 49 chr5 43688504 43688687 -159396845 - L2 LINE L2 -1 3312 3120 343 198 306 0 chr5 43689056 43689167 -159396365 + MER103 DNA DNA 19 163 -3 2145 166 80 19 chr5 43689204 43689669 -159395863 - MER50 LTR ERV1 0 734 242 347 260 110 30 chr5 43689758 43689858 -159395674 - MER50 LTR ERV1 -617 117 10 593 325 148 37 chr5 43690320 43690962 -159394570 - L2 LINE L2 -534 2780 2068 2027 169 5 63 chr5 43691175 43691572 -159393960 - MLT1A2 LTR MaLR 0 374 1 407 349 39 37 chr5 43691780 43692135 -159393397 - L2 LINE L2 -1108 2206 1851 3435 109 42 35 chr5 43692177 43692779 -159392753 - MER4B LTR ERV1 0 779 1 231 254 8 134 chr5 43692998 43693132 -159392400 + L2 LINE L2 2164 2280 -1034 261 235 0 0 chr5 43693677 43693728 -159391804 - L2 LINE L2 -9 3304 3254 1868 125 4 0 chr5 43694068 43694332 -159391200 + AluSx SINE Alu 38 302 -10 734 144 60 56 chr5 43694493 43694707 -159390825 - MER106B DNA MER1_type 0 1059 27 992 144 69 0 chr5 43694838 43695011 -159390521 - MER20 DNA MER1_type 0 219 35 952 188 43 27 chr5 43695975 43696161 -159389371 + MER5A DNA MER1_type 1 189 0 574 319 27 21 chr5 43696169 43696357 -159389175 - MER5A DNA MER1_type 0 189 1 2502 42 0 13 chr5 43696508 43696816 -159388716 + AluY SINE Alu 1 304 -7 427 321 36 15 chr5 43697579 43697716 -159387816 + MER91A DNA MER1_type 4 143 -53 2005 168 7 67 chr5 43697902 43698319 -159387213 - L1MC2 LINE L1 -10 6334 5943 2050 163 6 11 chr5 43698565 43698914 -159386618 - MLT1A1 LTR MaLR -8 357 11 1005 213 40 5 chr5 43698995 43699197 -159386335 + MER3 DNA MER1_type 1 209 0 208 0 62 0 chr5 43699301 43699333 -159386199 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2243 92 0 0 chr5 43699337 43699621 -159385911 - AluSg SINE Alu -26 284 1 22 99 0 0 chr5 43699769 43699840 -159385692 + AT_rich Low_complexity Low_complexity 1 71 0 2250 113 3 0 chr5 43699868 43700168 -159385364 - AluSx SINE Alu -11 301 1 371 316 32 16 chr5 43701490 43701677 -159383855 + L2 LINE L2 3119 3308 -5 634 235 145 30 chr5 43701699 43701899 -159383633 + MIR SINE MIR 33 255 -7 202 353 60 27 chr5 43702445 43702595 -159382937 + MIR SINE MIR 47 201 -61 297 0 0 0 chr5 43702792 43702825 -159382707 + (CA)n Simple_repeat Simple_repeat 2 34 0 1598 88 0 44 chr5 43703320 43703548 -159381984 + AluY SINE Alu 84 301 -10 315 203 34 9 chr5 43704272 43704377 -159381155 + MIR SINE MIR 41 147 -69 180 316 53 42 chr5 43704588 43704683 -159380849 + L2 LINE L2 3168 3263 -9 185 286 182 13 chr5 43704760 43704837 -159380695 + MIR SINE MIR 16 105 -157 238 298 62 133 chr5 43704932 43705475 -159380057 + L2 LINE L2 2742 3270 -2 192 214 125 0 chr5 43705526 43705582 -159379950 + MIR SINE MIR 200 262 0 263 184 0 0 chr5 43706368 43706417 -159379115 + AluSp/q SINE Alu 255 303 0 23 33 0 0 chr5 43706733 43706763 -159378769 + AT_rich Low_complexity Low_complexity 1 30 0 4112 186 23 60 chr5 43707549 43708454 -159377078 - L1MA9 LINE L1 -38 6274 5425 2259 126 47 47 chr5 43708454 43708818 -159376714 - THE1B LTR MaLR 0 364 1 4112 186 23 60 chr5 43708818 43709134 -159376398 - L1MA9 LINE L1 -887 5425 5099 293 338 55 28 chr5 43709407 43709552 -159375980 - L2 LINE L2 -12 3260 3112 31 26 0 0 chr5 43709986 43710024 -159375508 + AT_rich Low_complexity Low_complexity 1 38 0 884 134 98 12 chr5 43710330 43710494 -159375038 + FRAM SINE Alu 1 176 0 823 294 46 25 chr5 43710730 43711056 -159374476 + MLT1I LTR MaLR 59 391 -18 322 330 109 40 chr5 43711075 43711396 -159374136 - L2 LINE L2 -363 2951 2609 729 267 88 5 chr5 43711396 43711613 -159373919 - MIR SINE MIR -2 260 26 215 314 117 55 chr5 43711736 43712172 -159373360 - L2 LINE L2 -823 2491 2029 449 281 46 7 chr5 43712917 43713070 -159372462 + MER103 DNA DNA 2 160 -6 490 274 74 15 chr5 43713211 43713505 -159372027 + MLT1I LTR MaLR 70 408 -1 2018 115 7 39 chr5 43713687 43713992 -159371540 + AluSx SINE Alu 1 295 -17 2339 107 3 0 chr5 43714038 43714348 -159371184 + AluSp SINE Alu 1 311 -2 412 296 59 30 chr5 43714370 43714505 -159371027 - MER5A DNA MER1_type -49 140 2 387 193 68 0 chr5 43714816 43714904 -159370628 - MLT1K LTR MaLR -10 578 485 249 330 0 28 chr5 43715236 43715345 -159370187 - MLT1K LTR MaLR -110 478 373 431 211 0 0 chr5 43716043 43716119 -159369413 + MER20 DNA MER1_type 139 214 -5 703 314 21 8 chr5 43716130 43716366 -159369166 - L2 LINE L2 -514 2800 2562 320 303 74 8 chr5 43716389 43716511 -159369021 - MIR SINE MIR -113 149 20 1737 240 128 6 chr5 43717141 43717625 -159367907 - L1ME3A LINE L1 -14 6156 5614 192 365 61 35 chr5 43717879 43717994 -159367538 + MIR3 SINE MIR 39 156 -52 * 506 324 200 16 chr5 43717991 43718361 -159367171 - L2 LINE L2 0 3272 2835 2059 131 16 7 chr5 43718401 43718707 -159366825 - AluSx SINE Alu -3 309 1 656 270 12 85 chr5 43719049 43719297 -159366235 - MIR SINE MIR 0 262 33 280 354 9 9 chr5 43719644 43719757 -159365775 - L2 LINE L2 -666 2648 2536 319 337 17 23 chr5 43719823 43719998 -159365534 + MER117 DNA MER1_type 6 179 -18 2774 139 26 12 chr5 43720028 43720446 -159365086 + MSTA LTR MaLR 5 428 0 396 219 42 42 chr5 43720697 43720816 -159364716 - MER103 DNA DNA -45 121 3 1932 113 92 11 chr5 43720992 43721274 -159364258 - AluSq SINE Alu -8 305 1 208 286 14 43 chr5 43721529 43721599 -159363933 + L2 LINE L2 3205 3272 0 695 296 62 4 chr5 43722273 43722516 -159363016 - MIR SINE MIR -4 258 2 1831 130 10 17 chr5 43722867 43723204 -159362328 - MER1B DNA MER1_type 0 339 34 970 239 127 7 chr5 43723495 43723779 -159361753 + LTR16A LTR ERVL 129 446 -4 806 265 168 19 chr5 43724003 43724472 -159361060 + L2 LINE L2 2742 3277 -36 205 295 46 81 chr5 43724474 43724647 -159360885 - L2 LINE L2 -901 2413 2247 2064 112 11 0 chr5 43724717 43724995 -159360537 + AluSx SINE Alu 1 281 -31 477 0 0 0 chr5 43724998 43725051 -159360481 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 479 223 64 38 chr5 43725171 43725328 -159360204 - MLT1K LTR MaLR -65 523 363 766 267 6 0 chr5 43725539 43725719 -159359813 - MER63A DNA MER1_type -28 182 2 314 321 53 15 chr5 43725720 43725851 -159359681 - MLT1K LTR MaLR -430 158 23 22 0 0 0 chr5 43726437 43726459 -159359073 + AT_rich Low_complexity Low_complexity 1 22 0 284 268 227 0 chr5 43726541 43726638 -159358894 + L2 LINE L2 3186 3304 -9 2205 91 17 3 chr5 43726664 43726961 -159358571 + AluSp SINE Alu 1 301 -12 2003 119 7 4 chr5 43727488 43727765 -159357767 + AluSx SINE Alu 15 292 -20 445 70 14 14 chr5 43727769 43727840 -159357692 + (TG)n Simple_repeat Simple_repeat 2 72 0 1822 134 65 0 chr5 43728031 43728307 -159357225 + AluJo SINE Alu 1 294 -18 602 265 146 18 chr5 43728695 43728914 -159356618 + MIR SINE MIR 6 252 -10 220 302 0 0 chr5 43729026 43729079 -159356453 + MIR SINE MIR 99 151 -111 220 98 146 0 chr5 43730833 43730874 -159354658 - L2 LINE L2 -3 3310 3264 403 219 0 10 chr5 43730998 43731094 -159354438 - MIR SINE MIR -49 213 119 2145 100 0 7 chr5 43731599 43731924 -159353608 + AluSg1 SINE Alu 1 323 0 359 348 78 5 chr5 43732432 43732636 -159352896 - L3 LINE CR1 -821 756 538 453 213 41 49 chr5 43733345 43733467 -159352065 + Charlie8 DNA MER1_type 12 132 -2285 279 267 30 69 chr5 43734004 43734105 -159351427 - MIR SINE MIR -76 132 36 647 233 123 36 chr5 43734123 43734342 -159351190 + MIR SINE MIR 1 238 -24 2262 52 42 3 chr5 43734946 43735233 -159350299 + AluY SINE Alu 1 298 -13 250 329 51 29 chr5 43735822 43735959 -159349573 - L2 LINE L2 -1035 2279 2140 385 311 126 30 chr5 43736009 43736501 -159349031 + L1 LINE L1 4882 5425 -751 721 251 5 10 chr5 43737431 43737626 -159347906 - MER119 DNA MER1_type -3 580 387 1018 228 65 19 chr5 43737627 43737951 -159347581 + MER2 DNA MER2_type 2 340 -5 1202 243 74 38 chr5 43737962 43738328 -159347204 - MER119 DNA MER1_type -200 383 5 204 273 99 41 chr5 43738429 43738550 -159346982 - L2 LINE L2 0 3272 3145 994 243 23 5 chr5 43738583 43738801 -159346731 - MER58A DNA MER1_type 0 224 3 455 240 142 27 chr5 43739093 43739318 -159346214 - HAL1 LINE L1 -760 1747 1497 290 238 119 20 chr5 43739479 43739630 -159345902 - HAL1 LINE L1 -1004 1503 1338 321 305 23 29 chr5 43740966 43741140 -159344392 + Charlie8 DNA MER1_type 10 182 -2235 305 361 23 23 chr5 43741825 43741955 -159343577 - MIR3 SINE MIR -76 132 3 719 263 66 99 chr5 43742414 43742991 -159342541 - HAL1 LINE L1 -1244 1263 706 574 207 36 57 chr5 43743954 43744147 -159341385 - L1ME1 LINE L1 -68 6098 5910 318 67 0 0 chr5 43745305 43745350 -159340182 + (TG)n Simple_repeat Simple_repeat 2 46 0 237 272 56 56 chr5 43745495 43745620 -159339912 - MLT1I LTR MaLR -8 401 277 358 259 30 15 chr5 43745726 43745857 -159339675 - MLT1I LTR MaLR -276 133 1 21 57 0 0 chr5 43746841 43746876 -159338656 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr5 43747757 43747784 -159337748 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 397 35 5 chr5 43749706 43749905 -159335627 + L2 LINE L2 2558 2762 -552 31 0 0 0 chr5 43751334 43751365 -159334167 + AT_rich Low_complexity Low_complexity 1 31 0 6796 60 49 12 chr5 43751365 43752271 -159333261 - L1PA7 LINE L1 -7 6147 5234 25 0 0 0 chr5 43752643 43752668 -159332864 + AT_rich Low_complexity Low_complexity 1 25 0 412 212 0 10 chr5 43752811 43752910 -159332622 - HAL1 LINE L1 -107 2400 2303 302 286 0 0 chr5 43752915 43752985 -159332547 + C-rich Low_complexity Low_complexity 3 72 0 263 342 35 0 chr5 43753137 43753251 -159332281 - HAL1 LINE L1 -505 2002 1885 1432 204 99 3 chr5 43753599 43753913 -159331619 + MER2 DNA MER2_type 1 344 0 289 256 12 0 chr5 43754001 43754087 -159331445 + L1ME LINE L1 5470 5556 -608 2211 277 103 25 chr5 43754115 43755514 -159330018 - HAL1 LINE L1 -859 1648 1 999 133 100 120 chr5 43755782 43755909 -159329623 + MER46A DNA MER2_type 1 122 -2609 1651 154 0 74 chr5 43755909 43756233 -159329299 - AluJb SINE Alu -3 309 10 999 133 100 120 chr5 43756233 43756346 -159329186 + MER46A DNA MER2_type 122 236 0 332 278 146 35 chr5 43756884 43757028 -159328504 + MER5A DNA MER1_type 30 189 0 2431 68 0 26 chr5 43759692 43760003 -159325529 + AluY SINE Alu 1 303 -8 555 243 65 8 chr5 43760067 43760335 -159325197 - L1M4 LINE L1 -1529 4617 4320 2198 120 0 0 chr5 43760993 43761292 -159324240 - AluSx SINE Alu -11 301 3 26 30 0 0 chr5 43761320 43761353 -159324179 + AT_rich Low_complexity Low_complexity 1 33 0 244 316 79 0 chr5 43762262 43762401 -159323131 + L1ME4a LINE L1 5967 6116 -5 32 86 0 0 chr5 43762782 43762863 -159322669 + AT_rich Low_complexity Low_complexity 1 81 0 1312 217 128 41 chr5 43762923 43763130 -159322402 - L1MD2 LINE L1 -2 6357 6169 396 0 0 0 chr5 43763130 43763174 -159322358 + (TG)n Simple_repeat Simple_repeat 2 45 0 1312 217 128 41 chr5 43763174 43763501 -159322031 - L1MD2 LINE L1 -190 6169 5782 204 125 0 0 chr5 43764128 43764160 -159321372 + (T)n Simple_repeat Simple_repeat 1 32 0 302 235 62 12 chr5 43764787 43764868 -159320664 + L2 LINE L2 3188 3272 0 281 172 16 0 chr5 43765698 43765762 -159319770 + (TA)n Simple_repeat Simple_repeat 1 65 0 2335 96 3 7 chr5 43766017 43766319 -159319213 + AluSp SINE Alu 1 301 -12 325 291 87 12 chr5 43766340 43766512 -159319020 + L1ME4a LINE L1 5756 5940 -181 2147 88 39 0 chr5 43766821 43767104 -159318428 - AluSg SINE Alu -16 294 1 1957 211 147 4 chr5 43767352 43767821 -159317711 - MLT1F LTR MaLR -2 540 5 910 255 41 122 chr5 43767902 43767936 -159317596 - L2 LINE L2 -4 3309 3274 1862 113 103 6 chr5 43767936 43768265 -159317267 + MER46B DNA MER2_type 1 236 0 910 255 41 122 chr5 43768265 43768771 -159316761 - L2 LINE L2 -39 3274 2813 401 316 159 29 chr5 43770026 43770447 -159315085 - L2 LINE L2 -960 2354 1879 245 299 65 25 chr5 43770501 43770702 -159314830 + L1ME4a LINE L1 5541 5749 -372 358 216 115 0 chr5 43770868 43771016 -159314516 + L1ME4a LINE L1 5957 6121 0 1610 131 71 22 chr5 43771273 43771541 -159313991 - AluSg SINE Alu -10 300 20 2133 121 14 0 chr5 43771587 43771877 -159313655 - AluSx SINE Alu -18 294 1 718 209 134 42 chr5 43775051 43775358 -159310174 + L1ME4a LINE L1 5521 5855 -266 335 298 0 0 chr5 43776338 43776422 -159309110 - MIR SINE MIR -131 131 48 272 250 118 0 chr5 43776432 43776508 -159309024 + L2 LINE L2 3201 3285 -28 23 54 0 0 chr5 43776628 43776665 -159308867 + AT_rich Low_complexity Low_complexity 1 37 0 2058 97 8 0 chr5 43777708 43777975 -159307557 + AluSg SINE Alu 31 299 -11 21 36 0 0 chr5 43778138 43778166 -159307366 + AT_rich Low_complexity Low_complexity 1 28 0 2135 135 0 6 chr5 43778554 43778865 -159306667 - AluJb SINE Alu -3 309 1 876 155 7 14 chr5 43780834 43780982 -159304550 + MER44D DNA MER2_type 13 429 -180 1534 270 173 32 chr5 43781017 43782043 -159303489 + HAL1 LINE L1 1338 2507 0 215 167 0 0 chr5 43782279 43782315 -159303217 - L2 LINE L2 -21 3251 3216 914 224 32 36 chr5 43783287 43783506 -159302026 + MER20 DNA MER1_type 1 218 -1 2147 118 0 29 chr5 43784847 43785160 -159300372 + AluSc SINE Alu 1 304 -5 31 76 0 0 chr5 43785841 43785907 -159299625 + AT_rich Low_complexity Low_complexity 1 66 0 24 0 0 0 chr5 43786126 43786150 -159299382 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 43787502 43787524 -159298008 + AT_rich Low_complexity Low_complexity 1 22 0 42 0 0 0 chr5 43789946 43789988 -159295544 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 43792970 43793006 -159292526 + AT_rich Low_complexity Low_complexity 1 36 0 2264 100 16 3 chr5 43794677 43794986 -159290546 + AluSq SINE Alu 1 313 0 225 293 88 14 chr5 43795439 43795586 -159289946 + MIR SINE MIR 46 203 -59 2183 104 0 7 chr5 43796976 43797274 -159288258 - AluSg SINE Alu -14 296 1 192 254 0 0 chr5 43797351 43797410 -159288122 + (TA)n Simple_repeat Simple_repeat 1 59 0 367 198 94 0 chr5 43798225 43798331 -159287201 + MLT1E1 LTR MaLR 168 283 -371 403 277 136 77 chr5 43801942 43802448 -159283084 + MLT1H LTR MaLR 1 536 -13 222 91 0 0 chr5 43802999 43803032 -159282500 + (ATG)n Simple_repeat Simple_repeat 2 34 0 358 283 37 133 chr5 43805728 43806103 -159279429 - L2 LINE L2 0 3272 2934 2343 35 7 14 chr5 43806384 43806692 -159278840 - AluY SINE Alu 0 306 1 21 0 0 0 chr5 43807047 43807068 -159278464 + AT_rich Low_complexity Low_complexity 1 21 0 276 212 70 11 chr5 43807100 43807192 -159278340 + HsTC2 DNA Tc2 4 1898 0 282 277 36 66 chr5 43807193 43807359 -159278173 + L2 LINE L2 3135 3295 -18 252 329 73 22 chr5 43807364 43807501 -159278031 + MIR SINE MIR 112 255 -7 1437 156 133 15 chr5 43809270 43809540 -159275992 + AluJb SINE Alu 1 302 0 1923 146 28 0 chr5 43809589 43809876 -159275656 - AluJb SINE Alu -17 295 1 1494 189 25 28 chr5 43810454 43810771 -159274761 - L1MB2 LINE L1 -2 6169 5854 1807 194 60 28 chr5 43810891 43811323 -159274209 + MLT1C LTR MaLR 22 467 0 200 267 107 13 chr5 43811354 43811429 -159274103 - MIR SINE MIR -69 139 58 216 213 0 0 chr5 43811610 43811657 -159273875 - L2 LINE L2 -5 3308 3262 333 248 72 42 chr5 43812209 43812403 -159273129 + MIR SINE MIR 3 211 -51 530 222 129 6 chr5 43813005 43813176 -159272356 + L1ME3 LINE L1 5970 6161 -1 221 81 0 27 chr5 43813565 43813602 -159271930 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 207 151 0 38 chr5 43813952 43814005 -159271527 + (TAA)n Simple_repeat Simple_repeat 1 51 0 190 220 0 20 chr5 43814113 43814163 -159271369 - MIR SINE MIR -48 214 166 895 187 6 11 chr5 43815364 43815546 -159269986 - MER5A DNA MER1_type -8 181 1 184 326 0 0 chr5 43815900 43815949 -159269583 - MIR SINE MIR -167 95 47 691 249 19 89 chr5 43816130 43816243 -159269289 - MER58A DNA MER1_type -2222 198 79 2120 108 17 3 chr5 43816243 43816538 -159268994 + AluSx SINE Alu 1 299 -13 691 249 19 89 chr5 43816538 43816563 -159268969 - MER58A DNA MER1_type -2341 79 54 2319 102 0 3 chr5 43816563 43816866 -159268666 - AluSx SINE Alu -10 302 1 691 249 19 89 chr5 43816866 43816939 -159268593 - MER58A DNA MER1_type -2366 54 1 721 251 141 73 chr5 43818349 43818816 -159266716 + MLT1L LTR MaLR 113 611 -4 324 158 0 0 chr5 43818872 43818929 -159266603 + (CA)n Simple_repeat Simple_repeat 1 57 0 2346 106 0 3 chr5 43820799 43821102 -159264430 - AluSq SINE Alu -11 302 1 248 291 55 55 chr5 43821173 43821300 -159264232 - MIR SINE MIR -63 145 19 236 268 0 0 chr5 43821810 43821866 -159263666 + A-rich Low_complexity Low_complexity 5 60 0 2241 97 0 0 chr5 43823624 43823912 -159261620 - AluSx SINE Alu -24 288 1 1942 118 39 15 chr5 43823976 43824308 -159261224 - L1MA5A LINE L1 -7 6290 5951 2280 110 0 3 chr5 43824504 43824804 -159260728 + AluSx SINE Alu 1 299 -13 286 367 24 9 chr5 43824836 43825046 -159260486 - L3 LINE CR1 -7 1570 1358 1323 161 20 91 chr5 43825227 43825295 -159260237 - MER41D LTR ERV1 -280 277 206 2297 105 0 0 chr5 43825295 43825590 -159259942 - AluSx SINE Alu -17 295 1 1323 161 20 91 chr5 43825590 43825819 -159259713 - MER41D LTR ERV1 -351 206 1 225 229 21 0 chr5 43825819 43825864 -159259668 - MLT1E1 LTR MaLR -608 46 1 286 214 28 45 chr5 43826113 43826291 -159259241 + (TATAA)n Simple_repeat Simple_repeat 3 177 0 25 0 0 0 chr5 43826302 43826327 -159259205 + AT_rich Low_complexity Low_complexity 1 25 0 321 209 81 23 chr5 43826835 43826921 -159258611 - MER103 DNA DNA -73 93 3 351 96 0 0 chr5 43826936 43826988 -159258544 + (TG)n Simple_repeat Simple_repeat 2 53 0 475 232 0 85 chr5 43829437 43829601 -159255931 - MIR SINE MIR 0 262 113 2426 81 7 0 chr5 43830441 43830739 -159254793 - AluSx SINE Alu -12 300 1 604 239 17 28 chr5 43830894 43831070 -159254462 + MER5B DNA MER1_type 5 178 0 2489 88 0 0 chr5 43832465 43832772 -159252760 + AluSg SINE Alu 1 307 -3 258 330 26 0 chr5 43833608 43833723 -159251809 + MIR SINE MIR 68 185 -77 536 198 0 45 chr5 43833802 43833913 -159251619 + MLT1I LTR MaLR 104 209 -200 376 257 37 44 chr5 43834085 43834221 -159251311 - L2 LINE L2 -2 3270 3136 197 180 20 0 chr5 43836054 43836104 -159249428 + CT-rich Low_complexity Low_complexity 1 51 0 640 245 25 80 chr5 43836679 43836916 -159248616 - MIR SINE MIR -16 246 23 502 191 223 37 chr5 43837026 43837214 -159248318 - MIR SINE MIR -38 224 2 2734 154 14 86 chr5 43837416 43837976 -159247556 + MLT2B1 LTR ERVL 1 520 0 872 124 71 41 chr5 43838489 43838658 -159246874 - Tigger3b DNA MER2_type -107 1124 951 1098 134 11 23 chr5 43838668 43838873 -159246659 + L1MA4A LINE L1 1 544 -6665 3273 247 19 1 chr5 43839004 43839679 -159245853 + L1MA4A LINE L1 1063 1749 -5460 * 6045 169 36 40 chr5 43839673 43841937 -159243595 + L1MA4A LINE L1 5155 7354 -11 5857 114 47 9 chr5 43841937 43842869 -159242663 - Tigger3b DNA MER2_type -263 968 1 600 184 217 0 chr5 43842875 43843027 -159242505 - MIR SINE MIR -66 196 12 35 24 0 0 chr5 43843028 43843070 -159242462 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr5 43843134 43843154 -159242378 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 819 191 29 71 chr5 43843156 43843366 -159242166 - AluJo SINE Alu -20 292 92 2246 121 0 0 chr5 43843398 43843704 -159241828 - AluY SINE Alu -5 306 1 22 0 0 0 chr5 43843825 43843847 -159241685 + AT_rich Low_complexity Low_complexity 1 22 0 921 251 34 8 chr5 43845099 43845334 -159240198 + MER69 DNA AcHobo 4 244 -2282 1665 144 107 26 chr5 43845341 43845687 -159239845 + THE1C LTR MaLR 2 375 0 404 125 14 28 chr5 43845689 43845761 -159239771 + MER69 DNA AcHobo 2454 2524 -2 217 156 44 0 chr5 43845772 43845817 -159239715 + MIR SINE MIR 151 197 -65 1037 146 50 85 chr5 43845970 43846230 -159239302 + ORSL DNA AcHobo 1 251 -24 27 0 0 0 chr5 43847460 43847487 -159238045 + GC_rich Low_complexity Low_complexity 1 27 0 237 119 15 30 chr5 43847490 43847557 -159237975 + (CGGGGG)n Simple_repeat Simple_repeat 5 70 0 21 0 0 0 chr5 43847587 43847608 -159237924 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 43847669 43847692 -159237840 + GC_rich Low_complexity Low_complexity 1 23 0 21 104 0 0 chr5 43847930 43848007 -159237525 + GC_rich Low_complexity Low_complexity 1 77 0 412 170 71 18 chr5 43849695 43849807 -159235725 - L1MC4a LINE L1 -1974 5834 5717 404 37 19 0 chr5 43850564 43850618 -159234914 + (TA)n Simple_repeat Simple_repeat 2 56 0 848 276 75 44 chr5 43850721 43851173 -159234359 - L2 LINE L2 -12 3301 2836 247 350 57 0 chr5 43851252 43851375 -159234157 + L2 LINE L2 3184 3313 0 241 230 115 23 chr5 43853329 43853416 -159232116 - MIR3 SINE MIR -23 185 91 421 254 66 8 chr5 43853481 43853603 -159231929 + L2 LINE L2 3183 3311 -2 460 307 6 17 chr5 43854029 43854208 -159231324 + L1ME4a LINE L1 5501 5677 -444 2235 98 3 0 chr5 43854434 43854730 -159230802 - AluY SINE Alu -14 297 1 489 277 82 24 chr5 43854737 43854952 -159230580 + L1ME4a LINE L1 5710 5952 -169 324 0 0 0 chr5 43854952 43854988 -159230544 + (TG)n Simple_repeat Simple_repeat 2 37 0 489 277 82 24 chr5 43854988 43855100 -159230432 + L1ME4a LINE L1 5952 6056 -65 314 167 188 52 chr5 43855140 43855236 -159230296 + MIR SINE MIR 46 154 -108 1946 135 51 15 chr5 43856209 43856543 -159228989 + MER7A DNA MER2_type 2 345 -1 267 242 0 0 chr5 43857429 43857491 -159228041 - Charlie8 DNA MER1_type -991 1426 1365 576 270 105 84 chr5 43857495 43857877 -159227655 - Charlie8 DNA MER1_type -2017 400 11 303 270 72 13 chr5 43857921 43858073 -159227459 - L1ME4a LINE L1 -188 5933 5773 2534 74 0 0 chr5 43858348 43858659 -159226873 - AluY SINE Alu 0 311 1 362 286 40 31 chr5 43858699 43858860 -159226672 - L1ME4a LINE L1 -11 6110 5945 240 35 0 0 chr5 43858860 43858889 -159226643 + (CA)n Simple_repeat Simple_repeat 2 30 0 362 286 40 31 chr5 43858889 43858954 -159226578 - L1ME4a LINE L1 -176 5945 5882 367 61 0 0 chr5 43858956 43859005 -159226527 - Alu SINE Alu -6 294 246 182 36 0 36 chr5 43859380 43859408 -159226124 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2090 118 0 20 chr5 43859410 43859707 -159225825 - AluSq SINE Alu -20 293 3 318 232 99 49 chr5 43859941 43860083 -159225449 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 43860083 43860113 -159225419 + AT_rich Low_complexity Low_complexity 1 30 0 2092 132 7 0 chr5 43860776 43861071 -159224461 + AluSx SINE Alu 3 299 -13 1980 124 14 0 chr5 43861909 43862184 -159223348 + AluSx SINE Alu 1 279 -33 1783 107 0 50 chr5 43862184 43862464 -159223068 + LTR17 LTR ERV1 1 266 -514 1784 136 55 27 chr5 43964438 43964768 -159120764 - MER44D DNA MER2_type 0 609 1 23 0 0 0 chr5 43965425 43965448 -159120084 + AT_rich Low_complexity Low_complexity 1 23 0 187 235 0 39 chr5 43967133 43967184 -159118348 - L3 LINE CR1 -5 1572 1524 210 200 67 0 chr5 43967784 43967829 -159117703 + L2 LINE L2 3224 3271 -1 201 176 0 0 chr5 43967927 43967961 -159117571 + T-rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 43969787 43969808 -159115724 + AT_rich Low_complexity Low_complexity 1 21 0 2113 112 0 3 chr5 43969833 43970128 -159115404 - AluSx SINE Alu -18 294 1 330 275 63 41 chr5 43972570 43972718 -159112814 + MIR3 SINE MIR 37 187 -21 437 304 69 20 chr5 43975787 43975896 -159109636 - MIR SINE MIR -36 226 124 2047 90 0 22 chr5 43975896 43976174 -159109358 - AluSg SINE Alu -4 306 35 437 304 69 20 chr5 43976174 43976268 -159109264 - MIR SINE MIR -138 124 13 207 281 18 18 chr5 43976360 43976417 -159109115 + L2 LINE L2 3124 3180 -92 1323 232 169 23 chr5 43976864 43977480 -159108052 + LTR50 LTR ERVL 1 706 -89 406 156 130 0 chr5 43977488 43977565 -159107967 + 5S rRNA rRNA 2 88 -33 2244 77 20 17 chr5 43980194 43980492 -159105040 - AluSq SINE Alu -14 299 1 349 329 186 0 chr5 43981432 43981642 -159103890 + MIR SINE MIR 6 254 -8 1985 104 36 93 chr5 43981643 43981692 -159103840 - THE1B LTR MaLR 0 364 314 342 0 0 0 chr5 43981692 43981730 -159103802 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 831 176 0 0 chr5 43981730 43981878 -159103654 - FRAM SINE Alu -18 148 1 1985 104 36 93 chr5 43981878 43982213 -159103319 - THE1B LTR MaLR -48 316 1 2334 112 0 0 chr5 43982375 43982678 -159102854 - AluSq SINE Alu -10 303 1 410 319 0 33 chr5 43982969 43983151 -159102381 + MIR SINE MIR 28 203 -59 190 317 0 17 chr5 43983293 43983353 -159102179 + MIR SINE MIR 28 86 -176 2184 114 7 0 chr5 43983520 43983819 -159101713 - AluSq SINE Alu -12 301 1 448 275 25 17 chr5 43984068 43984188 -159101344 + MER5B DNA MER1_type 37 157 -21 255 321 23 23 chr5 43984263 43984394 -159101138 - MIR3 SINE MIR -24 184 54 2168 33 7 0 chr5 43984992 43985265 -159100267 - L1PA4 LINE L1 -263 5892 5618 2002 45 0 0 chr5 43985265 43985509 -159100023 + L1PA4 LINE L1 5911 6155 0 216 210 16 0 chr5 43985515 43985577 -159099955 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2153 113 3 22 chr5 43985662 43985980 -159099552 - AluSx SINE Alu 0 312 1 1989 105 59 0 chr5 43988316 43988602 -159096930 - AluSg SINE Alu -7 303 1 414 288 102 19 chr5 43993504 43993709 -159091823 - L2 LINE L2 -1 3312 3091 231 169 65 65 chr5 43993838 43993915 -159091617 - MIR SINE MIR -111 151 75 408 301 68 30 chr5 43995961 43996094 -159089438 - L2 LINE L2 -20 3252 3115 1792 89 24 0 chr5 43998259 43998507 -159087025 + L1PA7 LINE L1 5901 6154 0 224 298 169 16 chr5 44000102 44000226 -159085306 - MIR SINE MIR -118 144 2 192 371 133 9 chr5 44000344 44000449 -159085083 - MIR SINE MIR -131 131 14 230 220 60 0 chr5 44000584 44000634 -159084898 + MIR SINE MIR 54 106 -156 395 217 322 0 chr5 44001228 44001343 -159084189 - MER5A DNA MER1_type -37 152 1 570 295 74 11 chr5 44002552 44002742 -159082790 - MIR SINE MIR -50 212 11 1764 142 0 47 chr5 44002971 44003295 -159082237 + AluSx SINE Alu 1 310 0 306 0 0 0 chr5 44005668 44005702 -159079830 + (CA)n Simple_repeat Simple_repeat 2 35 0 272 304 67 28 chr5 44009606 44009653 -159075879 + L1MC4a LINE L1 5636 5680 -2128 2069 89 48 20 chr5 44009653 44009945 -159075587 - AluSg1 SINE Alu -9 300 1 272 304 67 28 chr5 44009945 44010150 -159075382 + L1MC4a LINE L1 5680 5898 -1910 404 250 29 103 chr5 44010549 44010676 -159074856 - MER5A DNA MER1_type 0 189 81 2455 55 7 3 chr5 44010676 44010986 -159074546 - AluY SINE Alu 0 311 1 404 250 29 103 chr5 44010986 44011062 -159074470 - MER5A DNA MER1_type -108 81 1 1464 101 0 41 chr5 44011079 44011298 -159074234 + AluSc SINE Alu 97 306 -3 194 250 0 0 chr5 44011891 44011931 -159073601 - MIR SINE MIR -129 79 40 515 281 6 121 chr5 44012005 44012336 -159073196 + L3 LINE CR1 1036 1328 -249 396 186 133 0 chr5 44012343 44012456 -159073076 + MLT1C LTR MaLR 6 133 -334 412 332 133 15 chr5 44012555 44012751 -159072781 + MIR SINE MIR 23 241 -21 354 301 113 5 chr5 44012817 44013020 -159072512 + L1ME LINE L1 5594 5818 -344 724 240 143 10 chr5 44013343 44013539 -159071993 - MIR SINE MIR -38 224 3 1470 102 0 0 chr5 44013717 44013903 -159071629 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 44014204 44014259 -159071273 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 44014916 44014966 -159070566 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 44014973 44015004 -159070528 + (CA)n Simple_repeat Simple_repeat 1 31 0 456 268 51 19 chr5 44015074 44015231 -159070301 + MER63A DNA MER1_type 49 210 0 515 343 91 8 chr5 44015431 44015673 -159069859 + MIR SINE MIR 1 262 0 1393 274 44 27 chr5 44015879 44016385 -159069147 + L2 LINE L2 2555 3064 -249 1541 230 78 16 chr5 44016385 44016819 -159068713 + MLT1C LTR MaLR 7 467 0 195 215 139 25 chr5 44016826 44016905 -159068627 + L2 LINE L2 3061 3148 -165 384 239 151 71 chr5 44017392 44017632 -159067900 + L1MC5 LINE L1 7311 7530 -431 2148 119 3 0 chr5 44017632 44017925 -159067607 + AluSx SINE Alu 2 295 -17 384 239 151 71 chr5 44017925 44018262 -159067270 + L1MC5 LINE L1 7530 7934 -27 375 78 0 0 chr5 44018288 44018339 -159067193 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 693 174 0 0 chr5 44019247 44019356 -159066176 + AluJb SINE Alu 179 287 -25 318 239 22 43 chr5 44019357 44019449 -159066083 - L1MC4 LINE L1 -1339 6703 6614 2190 124 28 36 chr5 44019453 44019817 -159065715 + THE1B LTR MaLR 4 364 0 198 368 26 26 chr5 44019820 44019937 -159065595 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 44020884 44020947 -159064585 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 44022364 44022397 -159063135 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 44022404 44022454 -159063078 + AT_rich Low_complexity Low_complexity 1 50 0 1464 155 18 129 chr5 44022467 44022853 -159062679 + MER7A DNA MER2_type 1 341 -5 1765 132 7 43 chr5 44023098 44023401 -159062131 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 44024040 44024060 -159061472 + (TA)n Simple_repeat Simple_repeat 2 21 0 1868 155 0 20 chr5 44024128 44024425 -159061107 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 44024426 44024478 -159061054 + (TA)n Simple_repeat Simple_repeat 1 52 0 232 233 47 0 chr5 44024483 44024569 -159060963 - L1MC4 LINE L1 -1339 6703 6614 241 298 0 0 chr5 44024570 44024627 -159060905 + (TA)n Simple_repeat Simple_repeat 1 57 0 313 318 0 0 chr5 44024628 44024716 -159060816 + L1MC4 LINE L1 6615 6702 -1340 322 297 41 41 chr5 44025412 44025557 -159059975 + HAL1 LINE L1 2307 2451 -56 341 316 39 124 chr5 44025857 44026212 -159059320 + L2 LINE L2 2948 3272 0 451 232 83 18 chr5 44026339 44026507 -159059025 + MER104 DNA MER2_type 2 180 0 271 0 0 0 chr5 44027496 44027526 -159058006 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 1239 106 252 0 chr5 44027526 44027752 -159057780 - AluSx SINE Alu -1 312 1 1706 215 65 70 chr5 44028077 44028634 -159056898 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 44028757 44029022 -159056510 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 44029890 44029996 -159055536 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 44030008 44030235 -159055297 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 44030539 44030951 -159054581 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 44031028 44031052 -159054480 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 44031153 44031486 -159054046 - L1MC4a LINE L1 -1962 5846 5534 1502 96 0 19 chr5 44031832 44032040 -159053492 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 44033721 44033810 -159051722 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 44034286 44034419 -159051113 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 44034901 44035221 -159050311 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 44037767 44038178 -159047354 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 44038247 44038564 -159046968 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 44038601 44038861 -159046671 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 44038866 44039338 -159046194 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 44039467 44039556 -159045976 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 44039975 44040022 -159045510 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 44040225 44040459 -159045073 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 44041000 44041233 -159044299 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 44041939 44041986 -159043546 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 44042013 44042046 -159043486 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 44042189 44042334 -159043198 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 44043210 44043431 -159042101 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 44043431 44043563 -159041969 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 44043843 44044139 -159041393 + AluSc SINE Alu 1 295 -14 1926 138 13 7 chr5 44044973 44045278 -159040254 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 44045388 44045487 -159040045 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 44045524 44045712 -159039820 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 44045847 44045881 -159039651 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 44046209 44046337 -159039195 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 44046558 44046662 -159038870 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 44046780 44046854 -159038678 - MIR SINE MIR -110 98 20 219 288 51 68 chr5 44047214 44047332 -159038200 - MIR3 SINE MIR -11 197 82 356 273 27 0 chr5 44047540 44047650 -159037882 - MIR SINE MIR -142 120 8 408 321 11 60 chr5 44047774 44048039 -159037493 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 44048639 44049472 -159036060 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 44050014 44050044 -159035488 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 44051104 44051206 -159034326 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 44051223 44051389 -159034143 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 44052658 44052977 -159032555 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 44053164 44053209 -159032323 - L2 LINE L2 0 3313 3269 396 338 89 24 chr5 44053941 44054154 -159031378 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 44054744 44055564 -159029968 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 44055829 44055924 -159029608 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 44056175 44056353 -159029179 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 44057732 44057777 -159027755 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 44057777 44057826 -159027706 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 44058644 44058696 -159026836 + (TA)n Simple_repeat Simple_repeat 2 53 0 956 260 71 57 chr5 44059769 44060441 -159025091 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 44060441 44060472 -159025060 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 44060474 44060541 -159024991 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 44061295 44061602 -159023930 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 44062518 44062583 -159022949 + AluS SINE Alu 225 287 -23 36 0 0 0 chr5 44062583 44062619 -159022913 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 44062991 44063202 -159022330 - MIR SINE MIR -39 223 22 211 211 28 55 chr5 44063249 44063358 -159022174 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 44065931 44066148 -159019384 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 44067011 44067033 -159018499 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 44067718 44067772 -159017760 + L2 LINE L2 3214 3271 -1 180 0 0 0 chr5 44067840 44067860 -159017672 + (T)n Simple_repeat Simple_repeat 1 20 0 459 301 63 0 chr5 44068103 44068246 -159017286 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 44068435 44068509 -159017023 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 44068543 44068571 -159016961 + AT_rich Low_complexity Low_complexity 1 28 0 261 132 21 79 chr5 44068577 44068767 -159016765 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 253 178 55 41 chr5 44068779 44068925 -159016607 + (TATAA)n Simple_repeat Simple_repeat 5 152 0 345 71 15 116 chr5 44068937 44069135 -159016397 + (TTATA)n Simple_repeat Simple_repeat 1 178 0 41 21 0 0 chr5 44069135 44069183 -159016349 + AT_rich Low_complexity Low_complexity 1 48 0 6770 231 56 25 chr5 44069283 44071516 -159014016 + L1ME LINE L1 3716 6016 -941 390 325 36 0 chr5 44071659 44071853 -159013679 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 44072492 44072521 -159013011 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 44073395 44073579 -159011953 - MER5A DNA MER1_type -3 186 2 2015 122 3 3 chr5 44074846 44075172 -159010360 + AluSq SINE Alu 1 326 0 519 230 96 86 chr5 44075203 44075304 -159010228 + MIR SINE MIR 52 151 -111 2322 102 3 0 chr5 44075304 44075609 -159009923 - AluSx SINE Alu -6 306 1 519 230 96 86 chr5 44075609 44075716 -159009816 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 44075739 44075859 -159009673 + L2 LINE L2 3150 3272 0 925 198 49 21 chr5 44076001 44076244 -159009288 + LTR23 LTR ERV1 161 410 -27 406 300 15 8 chr5 44076699 44076829 -159008703 + MIR SINE MIR 31 161 -101 1749 184 3 10 chr5 44077964 44078274 -159007258 + AluJo SINE Alu 1 308 -4 1242 64 12 0 chr5 44078330 44078501 -159007031 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1720 171 4 11 chr5 44078501 44078782 -159006750 - AluJb SINE Alu -1 453 5 288 340 100 0 chr5 44078826 44078926 -159006606 + L2 LINE L2 3163 3272 0 1085 288 32 37 chr5 44078977 44079352 -159006180 + LTR16B LTR ERVL 2 374 -90 23 0 0 0 chr5 44080602 44080625 -159004907 + AT_rich Low_complexity Low_complexity 1 23 0 342 0 0 0 chr5 44080755 44080793 -159004739 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 286 29 43 chr5 44081371 44081441 -159004091 + MER5A DNA MER1_type 51 119 -70 212 321 25 12 chr5 44081925 44082006 -159003526 + MIR3 SINE MIR 121 202 -6 2099 197 17 38 chr5 44082870 44083347 -159002185 - MLT1C LTR MaLR 0 467 1 1845 126 51 27 chr5 44083360 44083653 -159001879 - AluJb SINE Alu -12 300 1 188 349 36 36 chr5 44084337 44084420 -159001112 - L2 LINE L2 -2 3270 3188 188 307 34 91 chr5 44085978 44086066 -158999466 - L2 LINE L2 -89 3183 3101 237 338 150 8 chr5 44086068 44086201 -158999331 + MIR3 SINE MIR 9 160 -48 412 175 0 0 chr5 44086235 44086315 -158999217 - MER113 DNA MER1_type? -50 471 392 234 244 32 16 chr5 44086467 44086590 -158998942 - MER113 DNA MER1_type? -393 128 4 305 253 48 0 chr5 44088789 44088872 -158996660 + MIR SINE MIR 106 192 -70 2652 113 0 0 chr5 44088985 44089349 -158996183 - THE1B LTR MaLR 0 364 1 1561 71 9 0 chr5 44089737 44089947 -158995585 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 44090309 44090361 -158995171 + L2 LINE L2 3221 3272 0 358 270 11 0 chr5 44091377 44091466 -158994066 - MER81 DNA DNA -24 90 1 534 236 176 7 chr5 44091483 44091631 -158993901 - MER5A DNA MER1_type -13 176 4 * 707 273 123 0 chr5 44091631 44091851 -158993681 + MIR SINE MIR 15 262 0 448 271 98 35 chr5 44092261 44092464 -158993068 + MIR SINE MIR 47 262 0 234 0 0 0 chr5 44093614 44093640 -158991892 + (A)n Simple_repeat Simple_repeat 1 26 0 614 254 68 6 chr5 44093819 44093996 -158991536 - MIR SINE MIR -65 197 10 286 358 73 28 chr5 44094420 44094599 -158990933 + MIR3 SINE MIR 19 205 -3 515 293 69 16 chr5 44145016 44145204 -158940328 - MIR SINE MIR -57 205 8 452 246 37 0 chr5 44145366 44145500 -158940032 + MIR3 SINE MIR 60 198 -10 318 26 0 0 chr5 44145707 44145746 -158939786 + (T)n Simple_repeat Simple_repeat 1 39 0 417 327 109 24 chr5 44146312 44146642 -158938890 + L2 LINE L2 2863 3220 -93 1976 116 34 27 chr5 44146993 44147285 -158938247 - AluSg SINE Alu -16 294 1 751 325 39 0 chr5 44149526 44149757 -158935775 - MIR SINE MIR -4 258 19 240 180 16 16 chr5 44150792 44150853 -158934679 + (TA)n Simple_repeat Simple_repeat 2 62 0 2361 79 0 0 chr5 44151867 44152157 -158933375 - AluSg SINE Alu -20 290 1 317 315 22 0 chr5 44153412 44153504 -158932028 + MIR SINE MIR 36 129 -79 261 0 0 0 chr5 44154472 44154501 -158931031 + (TG)n Simple_repeat Simple_repeat 1 29 0 1022 203 75 98 chr5 44154606 44154941 -158930591 + MLT2D LTR ERVL 83 409 -5 1255 275 48 18 chr5 44155033 44155470 -158930062 - LTR16A LTR ERVL 0 450 1 1257 272 81 25 chr5 44155479 44155949 -158929583 + MLT1J LTR MaLR 8 503 -8 1553 184 21 23 chr5 44155954 44156373 -158929159 + Tigger5 DNA MER2_type 2 2323 0 1954 226 149 13 chr5 44157079 44157601 -158927931 + MLT1E LTR MaLR 1 593 0 670 299 42 0 chr5 44157988 44158205 -158927327 + MIR SINE MIR 25 250 -12 960 209 6 0 chr5 44158358 44158535 -158926997 - MER5B DNA MER1_type 0 178 1 480 276 99 0 chr5 44158756 44158908 -158926624 - MIR SINE MIR -17 245 79 353 223 50 36 chr5 44160115 44160254 -158925278 - MER5B DNA MER1_type -1 177 37 1760 167 7 20 chr5 44160254 44160559 -158924973 + AluJo SINE Alu 1 301 -11 248 184 20 0 chr5 44160581 44160630 -158924902 - MER5B DNA MER1_type -128 50 1 277 318 12 0 chr5 44161059 44161144 -158924388 + CT-rich Low_complexity Low_complexity 1 86 0 458 338 36 42 chr5 44161465 44161773 -158923759 + L3 LINE CR1 340 645 -932 1459 246 96 40 chr5 44161940 44162460 -158923072 + MLT1H LTR MaLR 1 549 0 327 294 52 125 chr5 44162580 44162947 -158922585 + L2 LINE L2 2933 3272 0 1952 149 71 31 chr5 44162990 44163340 -158922192 - THE1B LTR MaLR 0 364 1 424 340 85 28 chr5 44163729 44164011 -158921521 + L3 LINE CR1 1218 1515 -62 425 281 9 0 chr5 44164259 44164373 -158921159 - L2 LINE L2 -12 3301 3187 334 248 0 48 chr5 44164439 44164544 -158920988 + LTR67 LTR ERVL 457 556 -1 21 0 0 0 chr5 44164825 44164846 -158920686 + AT_rich Low_complexity Low_complexity 1 21 0 273 325 13 40 chr5 44165878 44166029 -158919503 + MIR3 SINE MIR 56 202 -6 4058 123 59 75 chr5 44166245 44167043 -158918489 - LTR1 LTR ERV1 0 785 1 1695 100 20 15 chr5 44167216 44167687 -158917845 - MER4A LTR ERV1 0 664 35 2353 60 0 7 chr5 44169544 44169852 -158915680 + AluSx SINE Alu 1 306 0 480 226 240 14 chr5 44170028 44170236 -158915296 + MIR SINE MIR 8 262 0 775 61 0 0 chr5 44170447 44170545 -158914987 + L1PA5 LINE L1 6057 6154 0 241 182 0 0 chr5 44170545 44170589 -158914943 + Charlie2 DNA MER1_type 2819 2862 0 592 314 67 37 chr5 44171905 44172500 -158913032 + L1ME3A LINE L1 4574 5186 -960 1335 160 23 0 chr5 44172503 44172722 -158912810 + AluJb SINE Alu 83 306 -6 1205 273 116 26 chr5 44172722 44173319 -158912213 + L1ME3A LINE L1 5179 5854 -316 2266 106 0 3 chr5 44173319 44173611 -158911921 + AluSx SINE Alu 1 291 -21 1205 273 116 26 chr5 44173611 44173719 -158911813 + L1ME3A LINE L1 5854 5951 -219 1111 256 55 28 chr5 44173952 44174351 -158911181 - L1MD2 LINE L1 -10 6349 5940 2268 91 10 7 chr5 44174391 44174687 -158910845 - AluY SINE Alu -14 297 1 447 19 0 0 chr5 44174739 44174791 -158910741 + (CA)n Simple_repeat Simple_repeat 1 52 0 231 294 31 19 chr5 44175029 44175189 -158910343 - L1M4 LINE L1 -2904 3242 3081 229 228 239 0 chr5 44176267 44176359 -158909173 + LTR33 LTR ERVL 1 114 -407 301 227 121 0 chr5 44176376 44176442 -158909090 + LTR16A LTR ERVL 365 438 -12 1968 263 112 37 chr5 44176452 44177257 -158908275 - HAL1 LINE L1 -37 2470 1606 2379 78 7 105 chr5 44177711 44177833 -158907699 + L1PA13 LINE L1 5794 5926 -237 1464 136 0 0 chr5 44177833 44178031 -158907501 + AluSg/x SINE Alu 84 281 -29 2379 78 7 105 chr5 44178031 44178318 -158907214 + L1PA13 LINE L1 5926 6163 0 251 254 15 0 chr5 44178375 44178442 -158907090 + (TA)n Simple_repeat Simple_repeat 1 68 0 231 286 12 12 chr5 44178607 44178691 -158906841 - LTR33 LTR ERVL -48 473 390 2870 156 102 5 chr5 44178699 44179654 -158905878 + L1M2 LINE L1 4741 5789 -523 239 203 101 0 chr5 44179659 44179728 -158905804 + L1MCa LINE L1 1995 2070 -4356 232 161 161 0 chr5 44179738 44179794 -158905738 + L1MCa LINE L1 2006 2070 -4356 306 242 0 63 chr5 44179816 44179911 -158905621 + L1MC4 LINE L1 6615 6703 -1339 360 286 13 9 chr5 44179919 44180155 -158905377 + (CATATA)n Simple_repeat Simple_repeat 1 236 0 461 308 0 0 chr5 44180159 44180480 -158905052 + (TA)n Simple_repeat Simple_repeat 1 321 0 234 214 56 45 chr5 44180525 44180614 -158904918 - L1MC4 LINE L1 -1339 6703 6614 * 299 264 0 22 chr5 44180600 44180691 -158904841 + L1MC4 LINE L1 6614 6702 -1340 759 237 36 47 chr5 44180701 44180954 -158904578 + pTR5 LTR ERV1 743 992 -1446 5623 80 12 118 chr5 44181041 44181965 -158903567 + LTR12 LTR ERV1 1 826 0 189 269 0 0 chr5 44181965 44182032 -158903500 + (TA)n Simple_repeat Simple_repeat 1 67 0 236 344 0 0 chr5 44182066 44182156 -158903376 + L1MC4 LINE L1 6614 6703 -1339 548 380 0 0 chr5 44182163 44182391 -158903141 + (CGTG)n Simple_repeat Simple_repeat 1 228 0 2495 166 69 14 chr5 44182447 44182942 -158902590 + L1MA9 LINE L1 5778 6299 -13 24 0 0 0 chr5 44182942 44182966 -158902566 + AT_rich Low_complexity Low_complexity 1 24 0 1902 161 20 0 chr5 44182987 44183113 -158902419 + AluSx SINE Alu 1 123 -189 333 0 0 0 chr5 44183113 44183150 -158902382 + (CA)n Simple_repeat Simple_repeat 2 38 0 1902 161 20 0 chr5 44183150 44183322 -158902210 + AluSx SINE Alu 123 305 -7 837 60 0 0 chr5 44183485 44183601 -158901931 + (CCA)n Simple_repeat Simple_repeat 2 117 0 25 31 0 0 chr5 44183951 44183983 -158901549 + AT_rich Low_complexity Low_complexity 1 32 0 711 245 17 33 chr5 44184202 44184443 -158901089 + L1MC5 LINE L1 7689 7925 -36 2341 97 0 3 chr5 44185599 44185908 -158899624 - AluSc SINE Alu -1 308 1 245 304 148 22 chr5 44185919 44186054 -158899478 + MLT1I LTR MaLR 18 169 -240 233 187 77 110 chr5 44186228 44186299 -158899233 + MLT1H LTR MaLR 446 515 -34 1337 205 64 53 chr5 44186299 44186660 -158898872 + MLT1A1 LTR MaLR 1 365 0 233 187 77 110 chr5 44186660 44186679 -158898853 + MLT1H LTR MaLR 515 533 -16 1530 186 26 42 chr5 44186841 44187157 -158898375 + MLT1A1 LTR MaLR 11 584 -42 258 318 24 63 chr5 44187224 44187350 -158898182 - LTR67 LTR ERVL -338 219 99 483 237 90 32 chr5 44188182 44188338 -158897194 + MLT1J LTR MaLR 3 167 -344 273 276 17 52 chr5 44188402 44188513 -158897019 + MLT1J LTR MaLR 376 482 -29 1225 267 55 32 chr5 44188513 44189038 -158896494 + MER34 LTR ERV1 1 537 -5 290 292 169 8 chr5 44189354 44189484 -158896048 + MIR SINE MIR 29 179 -83 413 208 240 8 chr5 44189532 44189657 -158895875 - MER69 DNA AcHobo -1072 154 1 374 284 155 7 chr5 44189698 44189846 -158895686 - MER91A DNA MER1_type 0 196 27 331 346 49 43 chr5 44189859 44190021 -158895511 + MER91A DNA MER1_type 14 176 -20 2661 131 85 7 chr5 44190410 44190859 -158894673 + MER31A LTR ERV1 1 484 -1 1074 38 16 33 chr5 44191099 44191282 -158894250 + (TC)n Simple_repeat Simple_repeat 1 180 0 967 58 40 6 chr5 44191306 44191480 -158894052 + (TC)n Simple_repeat Simple_repeat 1 180 0 319 199 0 31 chr5 44191678 44191769 -158893763 - L1ME LINE L1 -567 5554 5470 584 236 158 4 chr5 44192509 44192750 -158892782 - L1ME4a LINE L1 -74 6047 5770 519 265 197 18 chr5 44192802 44193091 -158892441 + MLT1J2 LTR MaLR 44 385 -65 2224 115 0 7 chr5 44193323 44193627 -158891905 - AluSq SINE Alu -11 302 1 1937 174 0 0 chr5 44193669 44193973 -158891559 + AluJb SINE Alu 1 304 -8 42 20 0 0 chr5 44194324 44194373 -158891159 + AT_rich Low_complexity Low_complexity 1 49 0 184 327 36 0 chr5 44194383 44194438 -158891094 + L2 LINE L2 15 71 -3243 2273 113 7 0 chr5 44194451 44194751 -158890781 - AluSq SINE Alu -11 302 1 319 241 55 90 chr5 44195577 44195722 -158889810 + L2 LINE L2 3174 3313 0 240 285 181 27 chr5 44195997 44196218 -158889314 - L1MC/D LINE L1 -1898 5910 5656 2159 113 3 0 chr5 44196322 44196615 -158888917 - AluSx SINE Alu -18 294 1 2465 271 68 50 chr5 44197422 44199326 -158886206 + L1ME LINE L1 8 1971 -4109 780 179 0 15 chr5 44199336 44199470 -158886062 + FLAM_A SINE Alu 10 141 -1 572 233 20 51 chr5 44199471 44199724 -158885808 + L1ME LINE L1 1996 2240 -4021 2183 180 50 61 chr5 44200292 44200327 -158885205 + LTR45B LTR ERV1 1 35 -748 1806 108 58 11 chr5 44200327 44200605 -158884927 - L1PA15 LINE L1 0 6165 5875 2183 180 50 61 chr5 44200605 44201069 -158884463 + LTR45B LTR ERV1 35 783 0 1744 169 14 0 chr5 44201279 44201558 -158883974 + AluJb SINE Alu 1 283 -29 193 291 64 82 chr5 44201942 44202052 -158883480 - L2 LINE L2 -802 2512 2405 2287 84 10 3 chr5 44202409 44202751 -158882781 + AluY SINE Alu 1 311 0 1539 206 82 20 chr5 44202922 44203325 -158882207 - MLT1C LTR MaLR 0 467 40 2524 53 3 0 chr5 44204287 44204589 -158880943 + AluY SINE Alu 1 303 -8 307 195 81 35 chr5 44206056 44206143 -158879389 - MIR SINE MIR -134 128 38 215 241 19 0 chr5 44206190 44206244 -158879288 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 189 306 139 19 chr5 44206405 44206543 -158878989 + MIR SINE MIR 14 164 -68 * 748 217 150 24 chr5 44206540 44206747 -158878785 - MIR SINE MIR -25 237 5 272 207 310 9 chr5 44206947 44207063 -158878469 - L3 LINE CR1 -109 1468 1318 271 323 111 30 chr5 44207941 44208034 -158877498 - L1MC4a LINE L1 -1904 5904 5820 1787 166 0 13 chr5 44208034 44208336 -158877196 - AluJo SINE Alu -14 298 1 271 323 111 30 chr5 44208336 44208539 -158876993 - L1MC4a LINE L1 -1988 5820 5584 293 256 128 69 chr5 44208543 44208918 -158876614 - L1MC4a LINE L1 -1174 4972 4576 558 332 9 18 chr5 44209005 44209222 -158876310 + MIR SINE MIR 42 256 -6 550 245 197 0 chr5 44209357 44209504 -158876028 - MER5A DNA MER1_type -1 188 13 202 206 0 0 chr5 44209641 44209675 -158875857 + polypyrimidine Low_complexity Low_complexity 3 36 0 438 305 58 0 chr5 44210603 44210793 -158874739 - LTR16B LTR ERVL -3 461 261 448 293 88 71 chr5 44210945 44210975 -158874557 - L1MC4a LINE L1 -1904 5904 5876 2385 133 30 25 chr5 44210975 44211337 -158874195 + THE1B LTR MaLR 1 364 0 448 293 88 71 chr5 44211337 44211942 -158873590 - L1MC4a LINE L1 -1932 5876 5258 2583 46 0 3 chr5 44211971 44212276 -158873256 - AluY SINE Alu -7 304 1 612 323 5 5 chr5 44212566 44212752 -158872780 - MIR SINE MIR -65 197 12 240 282 191 18 chr5 44213923 44214033 -158871499 - L2 LINE L2 -1 3271 3143 1558 286 55 66 chr5 44214453 44215285 -158870247 + L2 LINE L2 2120 2942 -372 303 167 0 83 chr5 44215316 44215388 -158870144 - LTR33 LTR ERVL 0 521 456 724 311 91 12 chr5 44215435 44215766 -158869766 - HsTC2a DNA Tc2 -293 451 95 1591 181 24 3 chr5 44215892 44216185 -158869347 - AluJo SINE Alu -13 299 1 948 127 48 6 chr5 44216740 44216906 -158868626 - L1MA6 LINE L1 0 6300 6128 2251 122 0 0 chr5 44216907 44217211 -158868321 - AluSx SINE Alu -8 304 1 9724 151 33 6 chr5 44217233 44219922 -158865610 - L1MA4A LINE L1 -11 6994 4238 2020 108 14 14 chr5 44219922 44220200 -158865332 - AluSq SINE Alu -19 294 17 484 235 111 0 chr5 44220200 44220353 -158865179 - L1MA4A LINE L1 -3213 3635 3466 6448 62 19 47 chr5 44220361 44221340 -158864192 - SVA Other Other -2 1384 433 5829 54 11 49 chr5 44221398 44222458 -158863074 - SVA Other Other -520 866 1 2224 100 7 0 chr5 44222509 44222799 -158862733 + AluSc SINE Alu 1 292 -17 11128 196 42 73 chr5 44222799 44226365 -158859167 - L1MA4A LINE L1 -3389 3459 2 22 0 0 0 chr5 44226603 44226625 -158858907 + AT_rich Low_complexity Low_complexity 1 22 0 616 246 140 74 chr5 44227401 44227536 -158857996 - MLT1H LTR MaLR -146 403 278 2938 79 3 0 chr5 44227536 44227890 -158857642 + THE1A LTR MaLR 1 355 0 616 246 140 74 chr5 44227890 44228132 -158857400 - MLT1H LTR MaLR -271 278 1 21 0 0 0 chr5 44228812 44228833 -158856699 + AT_rich Low_complexity Low_complexity 1 21 0 1512 70 0 11 chr5 44229497 44229684 -158855848 - AluSg/x SINE Alu -6 304 120 3933 123 40 26 chr5 44229712 44230315 -158855217 - LTR36 LTR ERV1 0 611 1 395 232 46 111 chr5 44230788 44231068 -158854464 - L1ME4a LINE L1 -91 6030 5769 505 284 128 0 chr5 44231188 44231329 -158854203 + MIR3 SINE MIR 19 177 -31 189 378 104 0 chr5 44231520 44231655 -158853877 - L2 LINE L2 0 3272 3124 368 222 60 8 chr5 44231786 44231903 -158853629 - L1ME4a LINE L1 -1 6120 5998 2577 196 27 34 chr5 44232169 44232663 -158852869 - L1MB5 LINE L1 -69 6105 5603 292 170 0 0 chr5 44232663 44232710 -158852822 - Alu SINE Alu -8 294 248 2577 196 27 34 chr5 44232710 44232981 -158852551 - L1MB5 LINE L1 -571 5603 5332 1144 133 25 36 chr5 44232981 44233211 -158852321 - AluJb SINE Alu 0 312 93 729 191 22 11 chr5 44233214 44233397 -158852135 - L1MB5 LINE L1 -813 5333 5149 189 0 0 0 chr5 44233404 44233425 -158852107 + (TTG)n Simple_repeat Simple_repeat 1 21 0 303 313 100 12 chr5 44233955 44234115 -158851417 + MIR SINE MIR 89 262 0 270 289 175 26 chr5 44235139 44235253 -158850279 + MIR3 SINE MIR 76 206 -2 2060 114 0 0 chr5 44238794 44239066 -158846466 - AluSg SINE Alu -11 299 28 21 0 0 0 chr5 44239074 44239095 -158846437 + AT_rich Low_complexity Low_complexity 1 21 0 809 241 17 0 chr5 44241290 44241464 -158844068 - MER58A DNA MER1_type -1 223 47 2078 128 0 0 chr5 44241464 44241746 -158843786 + AluSx SINE Alu 1 282 -30 820 261 73 5 chr5 44241932 44242150 -158843382 - MIR SINE MIR -29 233 1 1295 158 10 5 chr5 44242203 44242406 -158843126 + AluSx SINE Alu 1 204 -108 225 234 63 81 chr5 44242504 44242615 -158842917 + MIR SINE MIR 2 110 -152 435 275 142 18 chr5 44243614 44243848 -158841684 + MIR SINE MIR 5 262 0 862 278 93 34 chr5 44245752 44246297 -158839235 - L1ME3 LINE L1 -197 5924 5346 865 313 61 17 chr5 44246435 44247078 -158838454 - L1MB5 LINE L1 -1047 5099 4429 3498 130 23 50 chr5 44247083 44247700 -158837832 - LTR9B LTR ERV1 0 644 45 548 323 88 42 chr5 44247931 44248544 -158836988 - HAL1b LINE L1 -641 707 67 524 266 137 43 chr5 44248778 44249339 -158836193 - L1MB5 LINE L1 -2797 3349 2736 545 220 68 30 chr5 44249351 44249483 -158836049 + MER5A DNA MER1_type 9 145 -44 2472 210 60 102 chr5 44249494 44250414 -158835118 - MER65-int LTR ERV1 -3567 1304 424 839 318 33 15 chr5 44250515 44250914 -158834618 + L1PA12 LINE L1 10 415 -7166 265 338 36 7 chr5 44251293 44251432 -158834100 + L1M2 LINE L1 689 831 -6018 359 335 65 82 chr5 44251580 44251750 -158833782 + L1M2 LINE L1 901 1067 -5782 1049 284 31 25 chr5 44251960 44252411 -158833121 + L1PA12 LINE L1 1781 2326 -5258 7549 180 47 25 chr5 44252412 44254527 -158831005 + L1PA12 LINE L1 2467 4686 -2898 * 16323 167 22 9 chr5 44254524 44258114 -158827418 - L1M1 LINE L1 -743 6822 3213 2200 114 3 16 chr5 44258120 44258428 -158827104 - AluSg SINE Alu -6 304 1 7316 160 32 10 chr5 44258429 44259676 -158825856 - L1M1 LINE L1 -6275 1290 17 2291 155 63 24 chr5 44259689 44260115 -158825417 - MER65A LTR ERV1 0 445 3 6401 160 21 20 chr5 44260116 44261184 -158824348 - MER70A-int LTR ERVL -2334 2689 1621 5023 170 54 21 chr5 44261184 44262288 -158823244 - MER70A-int LTR ERVL -3832 1191 1 2170 189 25 12 chr5 44262288 44262690 -158822842 - MER70A LTR ERVL 0 472 66 364 180 34 22 chr5 44262763 44262852 -158822680 - L1ME LINE L1 -5905 165 76 197 65 32 0 chr5 44263478 44263509 -158822023 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 211 240 49 0 chr5 44264288 44264363 -158821169 - MIR SINE MIR -63 145 65 2378 80 3 0 chr5 44264381 44264669 -158820863 + AluSg SINE Alu 5 293 -17 569 313 65 5 chr5 44264680 44264894 -158820638 - MIR SINE MIR -21 241 15 473 154 154 0 chr5 44266204 44266308 -158819224 + L1 LINE L1 4124 4243 -1903 16334 214 48 41 chr5 44266308 44269897 -158815635 + L1PA16 LINE L1 101 3662 -3155 2006 112 0 4 chr5 44269897 44270164 -158815368 + AluSg SINE Alu 1 266 -44 16334 214 48 41 chr5 44270164 44272436 -158813096 + L1PA16 LINE L1 3662 5983 -834 2262 100 0 3 chr5 44272436 44272735 -158812797 + AluY SINE Alu 1 298 -13 16334 214 48 41 chr5 44272735 44272886 -158812646 + L1PA16 LINE L1 5983 6131 -686 930 226 40 9 chr5 44273269 44273495 -158812037 - MLT1B LTR MaLR 0 390 158 4654 116 58 0 chr5 44273495 44274165 -158811367 + L1PA16 LINE L1 6103 6811 -6 973 242 13 17 chr5 44275519 44275750 -158809782 + MIR SINE MIR 33 262 0 198 297 47 16 chr5 44275970 44276034 -158809498 - L2 LINE L2 -1 3271 3206 1247 269 19 65 chr5 44277022 44277486 -158808046 - MER115 DNA AcHobo 0 4031 249 520 136 0 0 chr5 44279846 44279927 -158805605 - MER53 DNA DNA 0 189 109 653 236 51 60 chr5 44280306 44280522 -158805010 - MER58C DNA MER1_type -1 214 1 1811 127 0 0 chr5 44281978 44282238 -158803294 - AluSq SINE Alu -48 265 6 21 0 0 0 chr5 44282554 44282575 -158802957 + AT_rich Low_complexity Low_complexity 1 21 0 235 260 91 0 chr5 44282784 44282861 -158802671 - L1ME LINE L1 -515 5606 5523 343 247 49 0 chr5 44283311 44283429 -158802103 + MIR3 SINE MIR 72 196 -12 2479 111 5 13 chr5 44285508 44285886 -158799646 - THE1C LTR MaLR 0 375 1 9733 96 42 63 chr5 44285886 44287500 -158798032 - THE1C-int LTR MaLR 0 1580 1 2532 102 16 8 chr5 44287500 44287872 -158797660 - THE1C LTR MaLR 0 375 1 761 193 52 57 chr5 44288698 44288937 -158796595 + L1ME LINE L1 5461 5690 -472 2062 114 119 35 chr5 44288949 44289378 -158796154 + MER4C LTR ERV1 1 465 0 1961 115 150 35 chr5 44289826 44290093 -158795439 - MER65A LTR ERV1 0 445 116 405 0 0 0 chr5 44290093 44290138 -158795394 + (TG)n Simple_repeat Simple_repeat 2 46 0 1961 115 150 35 chr5 44290138 44290269 -158795263 - MER65A LTR ERV1 -329 116 1 308 250 12 38 chr5 44290377 44290501 -158795031 - MLT1G LTR MaLR 0 586 431 183 80 0 0 chr5 44290869 44290894 -158794638 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 703 243 115 13 chr5 44291366 44291601 -158793931 - MIR SINE MIR -3 259 1 206 287 79 40 chr5 44293624 44293725 -158791807 + L2 LINE L2 3156 3260 -12 1444 171 4 16 chr5 44293729 44293975 -158791557 - AluSx SINE Alu -69 243 1 2229 114 3 0 chr5 44293998 44294305 -158791227 - AluSq SINE Alu -5 308 1 441 260 27 47 chr5 44294873 44295023 -158790509 + MER5A DNA MER1_type 42 188 -1 436 282 95 21 chr5 44295301 44295542 -158789990 - L1MC5 LINE L1 -60 7901 7643 2143 70 7 3 chr5 44296217 44296504 -158789028 - AluY SINE Alu -23 288 1 21 36 0 0 chr5 44297653 44297681 -158787851 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 44299302 44299326 -158786206 + (A)n Simple_repeat Simple_repeat 1 24 0 36 23 0 0 chr5 44300712 44300755 -158784777 + AT_rich Low_complexity Low_complexity 1 43 0 1340 195 30 50 chr5 44301624 44301927 -158783605 - AluJo SINE Alu -15 297 1 2270 116 3 0 chr5 44302703 44303014 -158782518 + AluSx SINE Alu 1 312 0 2046 140 58 5 chr5 44303121 44303500 -158782032 - Charlie1 DNA MER1_type -6 2755 2357 26 0 0 0 chr5 44307012 44307038 -158778494 + AT_rich Low_complexity Low_complexity 1 26 0 188 229 0 83 chr5 44307310 44307358 -158778174 - L2 LINE L2 -15 3257 3214 203 213 128 0 chr5 44307769 44307816 -158777716 - MIR3 SINE MIR -48 160 108 228 181 0 191 chr5 44308098 44308192 -158777340 - MIR SINE MIR -3 259 184 579 151 40 151 chr5 44310588 44310787 -158774745 + MER104 DNA MER2_type 1 177 -3 28 29 0 0 chr5 44312753 44312788 -158772744 + AT_rich Low_complexity Low_complexity 1 35 0 620 330 43 0 chr5 44312868 44313084 -158772448 + MIR SINE MIR 20 247 -15 1501 153 122 0 chr5 44314211 44314505 -158771027 + MER46B DNA MER2_type 32 236 0 326 351 157 39 chr5 44315014 44315632 -158769900 + L2 LINE L2 2197 2887 -427 1896 142 14 3 chr5 44317127 44317423 -158768109 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr5 44317797 44317828 -158767704 + AT_rich Low_complexity Low_complexity 1 31 0 747 114 79 0 chr5 44318562 44318702 -158766830 - L1MA9 LINE L1 0 6312 6162 384 277 85 21 chr5 44319291 44319432 -158766100 - MIR SINE MIR -74 188 39 2071 118 17 91 chr5 44319860 44320265 -158765267 + THE1C LTR MaLR 1 375 0 217 235 0 0 chr5 44320678 44320729 -158764803 + (CAATT)n Simple_repeat Simple_repeat 4 54 0 23 0 0 0 chr5 44321600 44321623 -158763909 + AT_rich Low_complexity Low_complexity 1 23 0 396 328 26 5 chr5 44322486 44322675 -158762857 - L1M4 LINE L1 -1072 5074 4882 26 0 0 0 chr5 44322693 44322719 -158762813 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 44323410 44323432 -158762100 + AT_rich Low_complexity Low_complexity 1 22 0 217 0 61 0 chr5 44325275 44325308 -158760224 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1942 158 0 3 chr5 44325973 44326271 -158759261 - AluSx SINE Alu -14 298 2 6235 134 47 60 chr5 44327308 44327665 -158757867 + Tigger3b DNA MER2_type 1 361 -2667 1617 146 31 8 chr5 44327665 44327926 -158757606 + AluJo SINE Alu 33 299 -13 6235 134 47 60 chr5 44327926 44328137 -158757395 + Tigger3b DNA MER2_type 361 573 -2455 2281 75 10 7 chr5 44328137 44328443 -158757089 - AluSx SINE Alu -5 307 1 6235 134 47 60 chr5 44328443 44328838 -158756694 + Tigger3b DNA MER2_type 573 948 -2080 2364 67 7 0 chr5 44328838 44329137 -158756395 - AluY SINE Alu -10 301 1 6235 134 47 60 chr5 44329137 44329417 -158756115 + Tigger3b DNA MER2_type 948 1230 -1 206 309 0 85 chr5 44329534 44329628 -158755904 - MIR SINE MIR -157 105 20 2100 84 0 74 chr5 44330180 44330503 -158755029 - AluSq SINE Alu -14 299 1 2312 76 0 33 chr5 44330546 44330850 -158754682 - AluSg SINE Alu -14 296 3 26 0 0 0 chr5 44330972 44330998 -158754534 + AT_rich Low_complexity Low_complexity 1 26 0 2811 237 35 30 chr5 44331638 44332441 -158753091 + L1ME2 LINE L1 5348 6154 -10 319 260 95 85 chr5 44332501 44332701 -158752831 + L1MC4 LINE L1 7830 8031 -11 1985 102 0 0 chr5 44333222 44333476 -158752056 - AluSx SINE Alu -13 299 46 300 51 0 0 chr5 44334136 44334175 -158751357 + MADE1 DNA Mariner 8 46 -34 272 304 67 28 chr5 44336128 44336333 -158749199 - L1MC4a LINE L1 -1910 5898 5680 2069 89 48 20 chr5 44336333 44336625 -158748907 + AluSg1 SINE Alu 1 300 -9 272 304 67 28 chr5 44336625 44336672 -158748860 - L1MC4a LINE L1 -2128 5680 5636 437 0 0 19 chr5 44340588 44340642 -158744890 + (TG)n Simple_repeat Simple_repeat 2 54 0 1763 142 0 47 chr5 44343015 44343339 -158742193 - AluSx SINE Alu 0 310 1 570 295 74 11 chr5 44343568 44343758 -158741774 + MIR SINE MIR 11 212 -50 395 217 322 0 chr5 44344967 44345082 -158740450 + MER5A DNA MER1_type 1 152 -37 230 220 60 0 chr5 44345676 44345726 -158739806 - MIR SINE MIR -156 106 54 192 371 133 9 chr5 44345861 44345966 -158739566 + MIR SINE MIR 14 131 -131 224 298 169 16 chr5 44346084 44346208 -158739324 + MIR SINE MIR 2 144 -118 1792 89 24 0 chr5 44347803 44348051 -158737481 - L1PA7 LINE L1 0 6154 5901 408 301 68 30 chr5 44350114 44350247 -158735285 + L2 LINE L2 3115 3252 -20 231 169 65 65 chr5 44352294 44352371 -158733161 + MIR SINE MIR 75 151 -111 414 288 102 19 chr5 44352500 44352705 -158732827 + L2 LINE L2 3091 3312 -1 1989 105 59 0 chr5 44357612 44357898 -158727634 + AluSg SINE Alu 1 303 -7 2231 113 0 19 chr5 44360235 44360553 -158724979 + AluSx SINE Alu 1 312 0 216 210 16 0 chr5 44360638 44360700 -158724832 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2002 45 0 0 chr5 44360706 44360951 -158724581 - L1PA4 LINE L1 0 6155 5911 2158 33 7 0 chr5 44360951 44361223 -158724309 + L1PA4 LINE L1 5619 5892 -263 255 321 23 23 chr5 44361821 44361952 -158723580 + MIR3 SINE MIR 54 184 -24 448 275 25 17 chr5 44362027 44362147 -158723385 - MER5B DNA MER1_type -21 157 37 2089 145 0 3 chr5 44362396 44362700 -158722832 + AluSq SINE Alu 1 303 -10 1985 104 36 93 chr5 44362862 44363197 -158722335 + THE1B LTR MaLR 1 314 -50 832 176 0 0 chr5 44363197 44363383 -158722149 + FRAM SINE Alu 1 50 0 1985 104 36 93 chr5 44363383 44363432 -158722100 + THE1B LTR MaLR 314 364 0 349 329 186 0 chr5 44363433 44363643 -158721889 - MIR SINE MIR -8 254 6 2244 77 20 17 chr5 44364582 44364880 -158720652 + AluSq SINE Alu 1 299 -14 406 156 130 0 chr5 44367509 44367586 -158717946 - 5S rRNA rRNA -33 88 2 1323 232 169 23 chr5 44367594 44368210 -158717322 - LTR50 LTR ERVL -89 706 1 207 281 18 18 chr5 44368657 44368714 -158716818 - L2 LINE L2 -92 3180 3124 437 304 69 20 chr5 44368807 44368901 -158716631 + MIR SINE MIR 13 101 -161 2047 90 0 22 chr5 44368901 44369179 -158716353 + AluSg SINE Alu 35 306 -4 437 304 69 20 chr5 44369179 44369288 -158716244 + MIR SINE MIR 101 226 -36 330 275 63 41 chr5 44372358 44372506 -158713026 - MIR3 SINE MIR -21 187 37 368 221 30 0 chr5 44373001 44373132 -158712400 + (TA)n Simple_repeat Simple_repeat 2 136 0 2130 109 0 3 chr5 44375302 44375596 -158709936 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr5 44375620 44375641 -158709891 + AT_rich Low_complexity Low_complexity 1 21 0 201 176 0 0 chr5 44377406 44377440 -158708092 + A-rich Low_complexity Low_complexity 1 34 0 210 200 67 0 chr5 44377538 44377583 -158707949 - L2 LINE L2 -1 3271 3224 187 235 0 39 chr5 44378183 44378234 -158707298 + L3 LINE CR1 1524 1572 -5 23 0 0 0 chr5 44379919 44379942 -158705590 + AT_rich Low_complexity Low_complexity 1 23 0 1784 136 55 27 chr5 44380599 44380929 -158704603 + MER44D DNA MER2_type 1 609 0 2079 125 34 0 chr5 44385649 44385944 -158699588 - AluSx SINE Alu -7 305 1 1985 135 0 3 chr5 44389207 44389513 -158696019 - AluSx SINE Alu 0 305 1 183 42 0 0 chr5 44390889 44390913 -158694619 + (CAA)n Simple_repeat Simple_repeat 2 25 0 283 246 82 27 chr5 44391129 44391239 -158694293 + MER5A DNA MER1_type 48 163 -26 342 245 98 0 chr5 44391497 44391599 -158693933 - MIR SINE MIR -3 259 148 1284 180 150 26 chr5 44394491 44394797 -158690735 - MER2 DNA MER2_type 0 344 1 245 254 211 35 chr5 44396499 44396641 -158688891 + MIR SINE MIR 8 174 -88 341 259 218 28 chr5 44396719 44396935 -158688597 + MIR SINE MIR 6 262 0 302 181 71 0 chr5 44397115 44397233 -158688299 + (TA)n Simple_repeat Simple_repeat 2 110 -27 1637 146 60 86 chr5 44397233 44397387 -158688145 + THE1C LTR MaLR 1 157 -218 2277 103 0 7 chr5 44397387 44397689 -158687843 - AluSq SINE Alu -13 300 1 1637 146 60 86 chr5 44397689 44397874 -158687658 + THE1C LTR MaLR 157 331 -44 2028 117 7 7 chr5 44397874 44398165 -158687367 - AluSx SINE Alu -16 296 6 1637 146 60 86 chr5 44398165 44398209 -158687323 + THE1C LTR MaLR 331 375 0 302 181 71 0 chr5 44398209 44398217 -158687315 + (TA)n Simple_repeat Simple_repeat 110 137 0 2058 146 0 0 chr5 44398596 44398891 -158686641 - AluSx SINE Alu -17 295 1 444 272 41 59 chr5 44399384 44399553 -158685979 + MER5B DNA MER1_type 8 173 -5 2253 101 0 13 chr5 44400056 44400373 -158685159 - AluSq SINE Alu 0 313 1 218 338 91 0 chr5 44401721 44401798 -158683734 + MER91A DNA MER1_type 66 149 -47 21 0 0 0 chr5 44402009 44402030 -158683502 + AT_rich Low_complexity Low_complexity 1 21 0 864 254 8 54 chr5 44402399 44402517 -158683015 + MIR SINE MIR 31 134 -128 1707 178 60 97 chr5 44402517 44403000 -158682532 - MLT1C LTR MaLR -2 465 1 864 254 8 54 chr5 44403000 44403121 -158682411 + MIR SINE MIR 134 259 -3 823 266 80 0 chr5 44403417 44403654 -158681878 + MIR SINE MIR 7 262 0 382 286 36 85 chr5 44403812 44404060 -158681472 - L1MC4a LINE L1 -1754 6054 5819 1302 257 79 23 chr5 44404076 44404546 -158680986 - L1MC4a LINE L1 -2050 5758 5263 714 244 27 58 chr5 44404703 44404961 -158680571 + MIR SINE MIR 13 262 0 382 350 25 19 chr5 44405187 44405347 -158680185 - L2 LINE L2 -1 3271 3111 489 289 20 0 chr5 44405388 44405540 -158679992 + L2 LINE L2 1525 1679 -1635 276 200 89 22 chr5 44405564 44405654 -158679878 + L2 LINE L2 2152 2247 -1067 704 260 100 111 chr5 44405688 44406092 -158679440 + L2 LINE L2 2189 2596 -717 2373 53 0 0 chr5 44406092 44406404 -158679128 - AluY SINE Alu 0 312 1 704 260 100 111 chr5 44406404 44406862 -158678670 + L2 LINE L2 2596 3036 -277 1001 264 100 46 chr5 44406884 44407366 -158678166 - MLT1G1 LTR MaLR -15 580 73 400 274 78 69 chr5 44407455 44407659 -158677873 + L2 LINE L2 3095 3300 -13 283 295 61 43 chr5 44408788 44408926 -158676606 + MIR3 SINE MIR 15 153 -67 2444 124 17 0 chr5 44409092 44409446 -158676086 + MLT1B LTR MaLR 31 390 0 250 221 38 99 chr5 44410283 44410414 -158675118 - L2 LINE L2 0 3313 3191 187 224 209 0 chr5 44410427 44410494 -158675038 + L2 LINE L2 3208 3288 -25 507 265 55 72 chr5 44410627 44410808 -158674724 - MER5B DNA MER1_type 0 178 1 201 247 144 41 chr5 44411231 44411328 -158674204 - L2 LINE L2 -2 3311 3205 180 0 0 0 chr5 44411371 44411391 -158674141 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2028 192 73 51 chr5 44411755 44412245 -158673287 - MLT1D LTR MaLR -4 501 1 836 344 105 37 chr5 44412269 44412799 -158672733 - L2 LINE L2 -528 2786 2294 2021 154 152 13 chr5 44412799 44413175 -158672357 + MSTA LTR MaLR 1 428 0 9528 146 30 29 chr5 44413177 44414752 -158670780 + MSTA-int LTR MaLR 3 1580 0 1802 178 152 13 chr5 44414752 44415128 -158670404 + MSTA LTR MaLR 1 428 0 836 344 105 37 chr5 44415128 44415628 -158669904 - L2 LINE L2 -1019 2295 1681 42684 62 2 0 chr5 44415926 44422048 -158663484 - L1PA5 LINE L1 -3 6151 17 226 240 0 0 chr5 44424880 44424930 -158660602 + L2 LINE L2 3264 3313 0 673 137 170 142 chr5 44425103 44425157 -158660375 + MER20 DNA MER1_type 1 52 -167 2449 70 0 0 chr5 44425157 44425455 -158660077 + AluY SINE Alu 9 306 -5 673 137 170 142 chr5 44425455 44425612 -158659920 + MER20 DNA MER1_type 52 218 -1 355 239 37 175 chr5 44427812 44428109 -158657423 + Charlie2 DNA MER1_type 1 256 -2606 2408 200 103 65 chr5 44428172 44428805 -158656727 + Charlie2 DNA MER1_type 1902 2582 -280 611 154 0 0 chr5 44428805 44428896 -158656636 + L1MC1 LINE L1 6243 6333 0 2408 200 103 65 chr5 44428896 44429187 -158656345 + Charlie2 DNA MER1_type 2582 2861 -1 1537 191 115 19 chr5 44429390 44429704 -158655828 + MER2 DNA MER2_type 1 344 0 5539 82 26 52 chr5 44430112 44431510 -158654022 - SVA Other Other -518 1047 14 189 0 0 0 chr5 44431537 44431558 -158653974 + (GGGAGA)n Simple_repeat Simple_repeat 4 24 0 434 275 83 31 chr5 44431721 44431914 -158653618 - MLT1H LTR MaLR -322 227 25 21 57 0 0 chr5 44431946 44431981 -158653551 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 44432601 44432644 -158652888 + AT_rich Low_complexity Low_complexity 1 43 0 918 228 67 12 chr5 44434772 44435026 -158650506 - MER46C DNA MER2_type -11 327 60 942 235 78 0 chr5 44435585 44435802 -158649730 + MIR SINE MIR 29 262 0 579 333 89 48 chr5 44437298 44437980 -158647552 + L2 LINE L2 2138 2847 -467 316 348 142 19 chr5 44438480 44438790 -158646742 - L2 LINE L2 -473 2841 2494 777 296 28 16 chr5 44438791 44439038 -158646494 + MIR SINE MIR 1 250 -12 321 351 34 58 chr5 44439142 44439323 -158646209 - L2 LINE L2 -925 2389 2216 2270 94 3 0 chr5 44439323 44439620 -158645912 - AluSg SINE Alu -11 299 2 321 351 34 58 chr5 44439620 44439731 -158645801 - L2 LINE L2 -1098 2216 2104 333 228 291 8 chr5 44439767 44439894 -158645638 - MLT1F LTR MaLR 0 542 380 10472 227 58 31 chr5 44440710 44442126 -158643406 - L1 LINE L1 -1416 5690 4314 1599 185 58 21 chr5 44442126 44442456 -158643076 + MER2 DNA MER2_type 1 342 -2 10472 227 58 31 chr5 44442456 44445795 -158639737 - L1 LINE L1 -2792 4314 1104 253 398 0 0 chr5 44445914 44446002 -158639530 - L2 LINE L2 -206 3066 2979 8642 139 14 0 chr5 44446575 44448771 -158636761 + L1PA11 LINE L1 3971 6170 -4 574 274 80 25 chr5 44448784 44448985 -158636547 - MIR SINE MIR -49 213 2 368 293 109 89 chr5 44450098 44450491 -158635041 - L2 LINE L2 -6 3307 2907 1747 262 119 104 chr5 44450517 44450622 -158634910 - L2 LINE L2 -467 2847 2745 266 0 0 29 chr5 44450622 44450657 -158634875 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2207 100 3 0 chr5 44450657 44450947 -158634585 - AluSp SINE Alu -22 291 1 1747 262 119 104 chr5 44450947 44452012 -158633520 - L2 LINE L2 -568 2746 1658 356 355 41 29 chr5 44452609 44452781 -158632751 + MIR3 SINE MIR 7 180 -28 446 224 44 2 chr5 44452787 44452913 -158632619 - L1ME2 LINE L1 -1 6333 6040 2598 213 37 12 chr5 44453042 44453630 -158631902 - L1ME2 LINE L1 -128 6036 5434 270 261 70 57 chr5 44454459 44454616 -158630916 + MER117 DNA MER1_type 1 159 -38 198 143 0 0 chr5 44455821 44455856 -158629676 + (TG)n Simple_repeat Simple_repeat 1 35 0 811 271 49 26 chr5 44456208 44456452 -158629080 + MIR SINE MIR 12 262 0 522 275 75 31 chr5 44457069 44457229 -158628303 + MER91B DNA MER1_type 15 181 -9 254 330 45 62 chr5 44457429 44457605 -158627927 - MER5B DNA MER1_type -5 173 1 391 304 0 26 chr5 44457668 44457783 -158627749 + MIR3 SINE MIR 76 187 -21 21 36 0 0 chr5 44458179 44458207 -158627325 + AT_rich Low_complexity Low_complexity 1 28 0 186 320 77 0 chr5 44458636 44458714 -158626818 + MIR SINE MIR 4 87 -175 2214 115 0 7 chr5 44458931 44459236 -158626296 - AluSx SINE Alu -9 303 1 3033 181 56 3 chr5 44460898 44461471 -158624061 - MER6A DNA MER2_type -2 603 1 228 141 47 47 chr5 44461527 44461638 -158623894 + (TATAA)n Simple_repeat Simple_repeat 1 111 0 235 268 14 0 chr5 44463305 44463376 -158622156 - L1ME2 LINE L1 -860 5286 5215 292 155 35 0 chr5 44463427 44463485 -158622047 - L1MD3 LINE L1 -11 7984 7925 1655 226 52 30 chr5 44463516 44463976 -158621556 - L1MC4 LINE L1 -16 8026 7320 369 270 63 31 chr5 44463979 44464138 -158621394 - L1ME2 LINE L1 -984 5162 4999 646 250 33 0 chr5 44464154 44464338 -158621194 + L1M4 LINE L1 4066 4255 -1891 297 324 118 11 chr5 44464338 44464600 -158620932 - L1ME2 LINE L1 -3604 2542 2253 1886 167 3 0 chr5 44464676 44464982 -158620550 - AluSx SINE Alu -5 307 1 357 255 143 31 chr5 44464986 44465147 -158620385 - L2 LINE L2 -1 3312 3134 1725 218 113 73 chr5 44465288 44465907 -158619625 - L1ME1 LINE L1 -12 6223 5580 4436 235 147 11 chr5 44465907 44467792 -158617740 - L1ME1 LINE L1 -1917 4298 2171 14036 196 44 27 chr5 44467812 44472019 -158613513 - L1MA6 LINE L1 -5 6997 2720 508 217 42 0 chr5 44472036 44472156 -158613376 - L1MA6 LINE L1 -6608 241 117 * 1243 280 63 95 chr5 44472135 44472755 -158612777 - L1ME1 LINE L1 -4213 2816 2252 183 42 0 0 chr5 44472755 44472779 -158612753 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1243 280 63 95 chr5 44472779 44473368 -158612164 - L1ME1 LINE L1 -4777 2252 1646 377 290 66 50 chr5 44473559 44473862 -158611670 - L1MEd LINE L1 -4908 1211 904 274 0 73 0 chr5 44474617 44474658 -158610874 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 470 210 10 0 chr5 44474870 44474970 -158610562 - L1MA8 LINE L1 -201 6090 5990 305 278 89 58 chr5 44475884 44476075 -158609457 + L2 LINE L2 3117 3313 0 31 76 0 0 chr5 44476580 44476646 -158608886 + AT_rich Low_complexity Low_complexity 1 66 0 221 231 0 31 chr5 44476712 44476777 -158608755 + (TA)n Simple_repeat Simple_repeat 2 64 0 3128 144 16 63 chr5 44477130 44477747 -158607785 - L1PB4 LINE L1 -2 6154 5567 647 204 11 28 chr5 44477747 44477928 -158607604 + L1P LINE L1 4977 5154 -992 26 30 0 0 chr5 44478265 44478298 -158607234 + AT_rich Low_complexity Low_complexity 1 33 0 576 317 73 76 chr5 44478499 44479036 -158606496 - L1MEd LINE L1 -5050 1069 535 252 250 0 0 chr5 44479565 44479621 -158605911 - MER5B DNA MER1_type -121 57 2 22 0 0 0 chr5 44480125 44480147 -158605385 + AT_rich Low_complexity Low_complexity 1 22 0 411 209 15 26 chr5 44480561 44480686 -158604846 + L1MA4A LINE L1 5983 6122 -182 216 255 0 0 chr5 44480891 44480942 -158604590 + GA-rich Low_complexity Low_complexity 2 52 0 25 51 0 0 chr5 44481138 44481177 -158604355 + AT_rich Low_complexity Low_complexity 1 39 0 856 154 58 19 chr5 44482314 44482470 -158603062 + THE1C LTR MaLR 1 162 -213 182 308 128 34 chr5 44482658 44482775 -158602757 + MIR SINE MIR 78 205 -57 804 152 22 22 chr5 44482937 44483172 -158602360 + GA-rich Low_complexity Low_complexity 1 235 0 629 73 37 9 chr5 44483192 44483301 -158602231 + (GAAA)n Simple_repeat Simple_repeat 1 112 0 33240 51 2 1 chr5 44483301 44489446 -158596086 + L1PA5 LINE L1 2 6150 -4 204 125 0 0 chr5 44489448 44489480 -158596052 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 185 182 0 0 chr5 44490823 44490856 -158594676 - L2 LINE L2 -220 3052 3020 2166 105 0 0 chr5 44491046 44491322 -158594210 + AluSg SINE Alu 22 297 -13 2733 59 15 6 chr5 44491927 44492265 -158593267 - SVA Other Other -339 1047 707 2411 61 3 23 chr5 44492552 44492862 -158592670 - AluY SINE Alu -5 306 3 787 228 41 0 chr5 44493020 44493191 -158592341 - MER5B DNA MER1_type 0 178 1 21 36 0 0 chr5 44494205 44494233 -158591299 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr5 44494297 44494324 -158591208 + (CA)n Simple_repeat Simple_repeat 2 28 0 2404 93 0 0 chr5 44495902 44496212 -158589320 + AluY SINE Alu 1 310 -1 2259 98 7 0 chr5 44496386 44496683 -158588849 + AluSq SINE Alu 1 299 -14 1403 190 52 35 chr5 44496732 44497022 -158588510 + AluJo SINE Alu 14 308 -4 470 314 142 34 chr5 44497025 44497462 -158588070 - L1ME4a LINE L1 -59 6062 5579 494 31 16 0 chr5 44497831 44497895 -158587637 + (ATG)n Simple_repeat Simple_repeat 2 66 0 213 319 66 11 chr5 44497897 44497988 -158587544 + MIR SINE MIR 159 254 -8 447 365 19 9 chr5 44498074 44498288 -158587244 - MIR SINE MIR -40 222 7 305 250 36 0 chr5 44499378 44499462 -158586070 - L2 LINE L2 0 3272 3186 484 179 278 40 chr5 44499497 44499571 -158585961 - MER5A DNA MER1_type -1 188 133 2101 94 0 47 chr5 44499571 44499746 -158585786 - AluSq SINE Alu 0 308 152 2357 88 0 10 chr5 44499746 44500054 -158585478 - AluY SINE Alu -6 305 1 2101 94 0 47 chr5 44500054 44500200 -158585332 - AluSq SINE Alu -156 152 1 484 179 278 40 chr5 44500200 44500275 -158585257 - MER5A DNA MER1_type -56 133 2 282 288 24 56 chr5 44500440 44500565 -158584967 - MER5B DNA MER1_type 0 178 58 268 298 89 21 chr5 44500541 44500781 -158584751 - L2 LINE L2 -267 3046 2793 * 924 226 21 29 chr5 44500781 44501024 -158584508 - MLT1A1 LTR MaLR 0 365 125 627 155 9 17 chr5 44501185 44501301 -158584231 - MLT1A1 LTR MaLR -244 121 7 185 262 0 66 chr5 44501326 44501387 -158584145 - L2 LINE L2 -558 2756 2700 546 285 57 42 chr5 44502633 44503452 -158582080 - L1ME LINE L1 -504 5617 4793 2011 131 0 3 chr5 44503480 44503790 -158581742 - AluSx SINE Alu 0 309 1 369 0 0 0 chr5 44503882 44503923 -158581609 + (TG)n Simple_repeat Simple_repeat 2 42 0 1800 88 0 8 chr5 44503942 44504191 -158581341 - L1PA8A LINE L1 0 6131 5885 401 290 0 0 chr5 44504307 44504407 -158581125 - MLT1I LTR MaLR -231 178 79 290 298 35 7 chr5 44504520 44504661 -158580871 - HAL1 LINE L1 -860 1647 1503 906 249 15 0 chr5 44504822 44505027 -158580505 - MER58A DNA MER1_type -16 208 1 229 256 49 82 chr5 44505045 44505277 -158580255 - L1MEd LINE L1 -4910 1209 988 497 220 28 0 chr5 44505277 44505386 -158580146 - MER81 DNA DNA -2 112 1 229 256 49 82 chr5 44505386 44505458 -158580074 - L1MEd LINE L1 -5131 988 915 301 207 0 0 chr5 44505979 44506037 -158579495 - MER20 DNA MER1_type -61 158 101 590 187 12 102 chr5 44506056 44506222 -158579310 - MER20 DNA MER1_type -68 151 1 2240 129 0 0 chr5 44506633 44506942 -158578590 - AluSx SINE Alu -3 309 1 941 134 70 6 chr5 44507117 44507288 -158578244 + MER5A DNA MER1_type 1 182 -7 455 311 37 6 chr5 44507325 44507486 -158578046 - MER5B DNA MER1_type 0 178 13 411 293 131 15 chr5 44507602 44507800 -158577732 + MIR SINE MIR 32 252 -10 346 270 42 69 chr5 44509779 44509968 -158575564 + L1MC4 LINE L1 7853 8036 -6 4665 97 7 10 chr5 44510836 44511538 -158573994 + L1PA12 LINE L1 5427 6126 -42 286 192 0 64 chr5 44511702 44511780 -158573752 + L1PA13 LINE L1 6074 6146 -17 567 275 144 18 chr5 44512295 44512517 -158573015 - MIR SINE MIR 0 262 13 24 32 0 0 chr5 44512804 44512835 -158572697 + AT_rich Low_complexity Low_complexity 1 31 0 2258 60 0 3 chr5 44513069 44513397 -158572135 - AluY SINE Alu 0 327 1 2229 141 24 27 chr5 44515039 44515415 -158570117 - THE1C LTR MaLR 0 375 1 963 257 9 0 chr5 44515772 44515994 -158569538 + MER58A DNA MER1_type 1 224 0 1010 185 0 38 chr5 44516138 44516349 -158569183 + MER3 DNA MER1_type 4 206 -3 1949 132 7 0 chr5 44516425 44516705 -158568827 - AluSx SINE Alu -30 282 1 456 176 0 0 chr5 44516705 44516790 -158568742 - L1MB3 LINE L1 -275 5908 5824 396 0 0 0 chr5 44517343 44517387 -158568145 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 200 200 18 91 chr5 44517472 44517527 -158568005 + L2 LINE L2 3217 3267 -5 378 0 0 0 chr5 44518161 44518203 -158567329 + (TA)n Simple_repeat Simple_repeat 2 43 0 801 227 134 28 chr5 44518209 44518425 -158567107 - MIR SINE MIR -22 240 2 320 361 27 33 chr5 44518452 44518635 -158566897 - L1MC4a LINE L1 -1910 5898 5717 2259 108 0 3 chr5 44519375 44519672 -158565860 + AluSq SINE Alu 1 296 -17 17296 44 0 0 chr5 44520205 44523134 -158562398 + L1PA5 LINE L1 3223 6152 -2 231 273 0 0 chr5 44523564 44523619 -158561913 - MER91 DNA MER1_type -77 63 9 7451 190 8 12 chr5 44523939 44526282 -158559250 - L1PA15 LINE L1 -2 6163 3820 200 163 23 0 chr5 44527026 44527069 -158558463 + (TA)n Simple_repeat Simple_repeat 2 45 0 594 65 54 0 chr5 44527095 44527188 -158558344 - L1MB3 LINE L1 -2 6181 6084 501 295 145 10 chr5 44527213 44527406 -158558126 - L3 LINE CR1 -810 767 549 275 326 97 35 chr5 44528367 44528511 -158557021 - MIR SINE MIR -45 217 65 952 202 35 5 chr5 44529244 44529447 -158556085 - MER3 DNA MER1_type 0 209 1 321 26 0 0 chr5 44530202 44530240 -158555292 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4704 55 5 0 chr5 44530240 44530825 -158554707 - L1PA8 LINE L1 -19 6153 5566 645 271 0 6 chr5 44531296 44531462 -158554070 + Charlie1 DNA MER1_type 1 165 -2596 * 1637 160 128 2 chr5 44531457 44531856 -158553676 + Charlie1 DNA MER1_type 2313 2761 0 5037 20 0 7 chr5 44532134 44532722 -158552810 + L1PA2 LINE L1 5566 6149 -6 310 21 21 21 chr5 44532725 44532773 -158552759 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 236 344 45 57 chr5 44533764 44533921 -158551611 + L2 LINE L2 3099 3253 -19 252 275 0 25 chr5 44533934 44534014 -158551518 - MIR SINE MIR -4 258 181 243 79 0 0 chr5 44534105 44534143 -158551389 + (T)n Simple_repeat Simple_repeat 1 38 0 354 98 0 0 chr5 44534395 44534446 -158551086 + (TG)n Simple_repeat Simple_repeat 2 52 0 308 189 14 0 chr5 44534691 44534765 -158550767 + (TA)n Simple_repeat Simple_repeat 2 76 0 1785 201 63 36 chr5 44534765 44535238 -158550294 - MLT1D LTR MaLR -19 486 1 383 247 51 51 chr5 44535282 44535460 -158550072 + MER5B DNA MER1_type 1 178 0 445 281 62 0 chr5 44535525 44535685 -158549847 + MIR SINE MIR 91 260 -2 467 295 114 44 chr5 44537700 44538131 -158547401 - L1MC4 LINE L1 -5 8037 7577 358 251 216 8 chr5 44538453 44538586 -158546946 + MER5A DNA MER1_type 26 188 -1 834 267 40 25 chr5 44539661 44540017 -158545515 - MER93b LTR ERV1 -2 401 12 203 143 0 24 chr5 44540032 44540074 -158545458 + (CATA)n Simple_repeat Simple_repeat 4 44 0 29 0 0 0 chr5 44542133 44542162 -158543370 + AT_rich Low_complexity Low_complexity 1 29 0 1413 98 24 0 chr5 44542162 44542367 -158543165 - L1PA10 LINE L1 0 6168 5959 615 335 88 20 chr5 44542907 44543203 -158542329 - L2 LINE L2 -4 3268 2953 1966 115 0 17 chr5 44543230 44543574 -158541958 - AluSq SINE Alu 0 341 3 596 273 112 8 chr5 44543973 44544240 -158541292 - MLT1J LTR MaLR -147 364 70 597 178 27 111 chr5 44544279 44544504 -158541028 - MER58C DNA MER1_type -6 209 4 184 263 171 26 chr5 44544599 44544675 -158540857 + L2 LINE L2 3186 3272 0 1899 177 0 16 chr5 44544760 44545163 -158540369 - AluJo SINE Alu 0 398 1 731 189 8 0 chr5 44546574 44546701 -158538831 + MIR SINE MIR 61 188 -74 22 88 0 0 chr5 44546727 44546784 -158538748 + AT_rich Low_complexity Low_complexity 1 57 0 582 300 85 0 chr5 44547575 44547775 -158537757 + MIR SINE MIR 14 230 -32 233 302 221 34 chr5 44547859 44548008 -158537524 + MIR3 SINE MIR 3 179 -29 1308 120 29 19 chr5 44548681 44548890 -158536642 + L1PA10 LINE L1 5955 6165 -3 1248 233 58 25 chr5 44549066 44549466 -158536066 - MLT1C LTR MaLR 0 467 55 21 0 0 0 chr5 44550022 44550043 -158535489 + AT_rich Low_complexity Low_complexity 1 21 0 4120 136 26 11 chr5 44550075 44550346 -158535186 - L1MB3 LINE L1 -2 6181 5915 2221 113 0 3 chr5 44550346 44550639 -158534893 - AluSx SINE Alu -20 292 1 4120 136 26 11 chr5 44550639 44551109 -158534423 - L1MB3 LINE L1 -268 5915 5429 261 261 267 12 chr5 44551979 44552144 -158533388 + MIR SINE MIR 5 211 -51 1819 167 0 19 chr5 44552947 44553264 -158532268 - AluJo SINE Alu -1 311 1 2364 57 40 3 chr5 44553675 44553975 -158531557 + AluY SINE Alu 1 311 0 624 239 0 0 chr5 44554435 44554552 -158530980 - FLAM_A SINE Alu -16 117 1 2289 87 3 10 chr5 44555653 44555952 -158529580 + AluSx SINE Alu 1 297 -15 235 71 48 0 chr5 44556216 44556258 -158529274 + (TG)n Simple_repeat Simple_repeat 1 44 0 634 192 148 16 chr5 44557315 44557497 -158528035 - MER20 DNA MER1_type 0 219 14 812 245 30 55 chr5 44559316 44559553 -158525979 - MIR SINE MIR -15 247 17 681 274 101 14 chr5 44559839 44560047 -158525485 - MIR SINE MIR -31 231 6 248 339 142 0 chr5 44560926 44561053 -158524479 + MIR SINE MIR 117 261 -1 1197 154 48 0 chr5 44563846 44564054 -158521478 + MER20 DNA MER1_type 1 218 -1 246 227 174 45 chr5 44565738 44565870 -158519662 - L1MC/D LINE L1 -1984 5824 5676 32 0 0 0 chr5 44566142 44566174 -158519358 + AT_rich Low_complexity Low_complexity 1 32 0 180 77 0 0 chr5 44566174 44566200 -158519332 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 201 245 29 29 chr5 44566374 44566441 -158519091 + (TATATG)n Simple_repeat Simple_repeat 1 70 -32 1716 156 126 3 chr5 44566441 44566767 -158518765 - MER47A DNA MER2_type 0 366 1 201 245 29 29 chr5 44566767 44566801 -158518731 + (TATATG)n Simple_repeat Simple_repeat 69 102 0 351 328 94 16 chr5 44566988 44567180 -158518352 + MIR SINE MIR 29 235 -27 375 281 231 5 chr5 44568305 44568508 -158517024 - MIR SINE MIR 0 262 14 182 234 141 0 chr5 44568638 44568702 -158516830 + L2 LINE L2 3159 3231 -82 2135 96 51 0 chr5 44568787 44569080 -158516452 + AluSx SINE Alu 1 308 -4 327 49 0 0 chr5 44570692 44570733 -158514799 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 1877 171 10 16 chr5 44570733 44571042 -158514490 - AluJo SINE Alu -5 307 1 529 209 70 6 chr5 44571087 44571245 -158514287 - HAL1b LINE L1 -900 448 281 216 0 0 0 chr5 44574486 44574510 -158511022 + (CA)n Simple_repeat Simple_repeat 1 24 0 399 270 26 26 chr5 44576326 44576441 -158509091 - MER5A DNA MER1_type -74 115 1 2188 83 45 3 chr5 44576449 44576738 -158508794 + AluSq SINE Alu 4 304 -9 203 269 0 0 chr5 44577292 44577344 -158508188 + T-rich Low_complexity Low_complexity 3 54 0 21 57 0 0 chr5 44577405 44577440 -158508092 + AT_rich Low_complexity Low_complexity 1 35 0 629 286 42 9 chr5 44578264 44578477 -158507055 + MIR SINE MIR 17 236 -26 21 0 0 0 chr5 44578498 44578519 -158507013 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr5 44578614 44578640 -158506892 + (A)n Simple_repeat Simple_repeat 1 26 0 2075 94 0 0 chr5 44578834 44579101 -158506431 - AluSc SINE Alu -8 301 35 595 137 0 17 chr5 44579635 44579752 -158505780 + (TA)n Simple_repeat Simple_repeat 2 116 0 31 44 0 0 chr5 44580346 44580391 -158505141 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 44581146 44581168 -158504364 + AT_rich Low_complexity Low_complexity 1 22 0 372 303 0 80 chr5 44581325 44581513 -158504019 + MER5A DNA MER1_type 1 173 -16 854 85 0 2 chr5 44581991 44582237 -158503295 + AluSp SINE Alu 1 283 -30 633 61 0 0 chr5 44582980 44583062 -158502470 + (CA)n Simple_repeat Simple_repeat 1 82 0 532 330 215 20 chr5 44583099 44583320 -158502212 - L2 LINE L2 -399 2915 2738 726 168 0 0 chr5 44583320 44583457 -158502075 + L1MB1 LINE L1 6032 6168 0 532 330 215 20 chr5 44583457 44583783 -158501749 - L2 LINE L2 -576 2738 2261 737 174 55 101 chr5 44583890 44584109 -158501423 - MER3 DNA MER1_type 0 209 1 246 346 44 44 chr5 44584209 44584345 -158501187 + L2 LINE L2 3137 3272 0 467 332 24 100 chr5 44585170 44585550 -158499982 - L2 LINE L2 -16 3256 2906 1063 120 0 3 chr5 44585553 44585798 -158499734 + AluSx SINE Alu 1 310 0 826 243 53 28 chr5 44586028 44586275 -158499257 + MIR SINE MIR 9 261 -1 310 296 40 32 chr5 44586759 44586884 -158498648 - MIR SINE MIR -110 152 27 190 300 0 0 chr5 44586928 44586978 -158498554 + MIR SINE MIR 203 252 -10 386 299 83 7 chr5 44587055 44587199 -158498333 + MER103 DNA DNA 11 165 -1 396 307 100 7 chr5 44587826 44587976 -158497556 + MIR3 SINE MIR 39 202 -6 2387 100 3 0 chr5 44588882 44589193 -158496339 + AluSx SINE Alu 1 312 0 323 270 34 81 chr5 44590626 44590774 -158494758 + MIR3 SINE MIR 10 150 -58 5521 167 25 9 chr5 44591043 44592868 -158492664 + L1PA16 LINE L1 4313 6157 -9 2217 116 0 0 chr5 44592874 44593168 -158492364 - AluSx SINE Alu -18 294 1 1197 169 0 0 chr5 44593794 44593983 -158491549 - MER5A DNA MER1_type 0 189 1 2033 120 14 7 chr5 44594033 44594324 -158491208 - AluSx SINE Alu -17 295 3 706 342 78 33 chr5 44594384 44594870 -158490662 - L2 LINE L2 -337 2977 2470 1176 84 0 0 chr5 44595626 44595769 -158489763 - AluSq/x SINE Alu -170 143 1 261 57 0 0 chr5 44598040 44598075 -158487457 + (GA)n Simple_repeat Simple_repeat 2 36 0 524 93 40 0 chr5 44598208 44598283 -158487249 - MADE1 DNA Mariner 0 80 3 4865 162 27 25 chr5 44598363 44598870 -158486662 - L1PB4 LINE L1 0 6156 5652 2175 118 7 0 chr5 44598870 44599176 -158486356 - AluSq SINE Alu -5 308 1 4865 162 27 25 chr5 44599176 44600203 -158485329 - L1PB4 LINE L1 -504 5652 4628 1877 146 37 0 chr5 44600615 44600909 -158484623 + AluSq SINE Alu 1 305 -8 366 273 189 54 chr5 44600913 44601173 -158484359 + MER102b DNA MER1_type 38 332 -9 471 276 113 49 chr5 44602413 44602638 -158482894 + L1MC4a LINE L1 5340 5549 -2259 2307 63 14 3 chr5 44602638 44602925 -158482607 - AluSc SINE Alu -19 290 1 471 276 113 49 chr5 44602925 44603105 -158482427 + L1MC4a LINE L1 5549 5771 -2037 * 2348 194 68 20 chr5 44603074 44603635 -158481897 + L1MB8 LINE L1 5574 6161 -17 408 278 30 35 chr5 44603647 44603845 -158481687 + L1MC4a LINE L1 5734 5930 -1878 22 0 0 0 chr5 44604205 44604227 -158481305 + AT_rich Low_complexity Low_complexity 1 22 0 314 366 24 30 chr5 44604578 44604782 -158480750 - MIR SINE MIR -52 210 7 248 333 5 0 chr5 44605118 44605200 -158480332 - MIR SINE MIR -65 143 60 262 333 14 42 chr5 44605289 44605433 -158480099 - L2 LINE L2 -1504 1810 1671 214 207 0 69 chr5 44605463 44605521 -158480011 + L2 LINE L2 3218 3271 -1 185 284 86 0 chr5 44605715 44605796 -158479736 - L2 LINE L2 -1900 1414 1327 604 245 60 27 chr5 44606212 44606433 -158479099 - MIR SINE MIR -5 257 31 228 304 0 38 chr5 44608154 44608233 -158477299 + MIR SINE MIR 33 108 -154 378 304 29 0 chr5 44608819 44608957 -158476575 - MLT1K LTR MaLR -156 432 291 21 71 0 0 chr5 44609551 44609593 -158475939 + AT_rich Low_complexity Low_complexity 1 42 0 1106 147 0 6 chr5 44610400 44610570 -158474962 + AluSg SINE Alu 1 169 -141 1498 107 0 0 chr5 44610588 44610793 -158474739 + AluSg/x SINE Alu 102 306 -4 748 167 126 75 chr5 44611095 44611206 -158474326 + MER63 DNA MER1_type 1 105 -956 1633 177 0 40 chr5 44611206 44611506 -158474026 + AluJo SINE Alu 1 288 -24 748 167 126 75 chr5 44611506 44611633 -158473899 + MER63 DNA MER1_type 105 251 -810 222 254 0 0 chr5 44612141 44612200 -158473332 + (CCA)n Simple_repeat Simple_repeat 3 61 0 537 253 148 48 chr5 44612203 44612432 -158473100 - MIR SINE MIR -4 258 7 1331 288 75 57 chr5 44613569 44613702 -158471830 - L2 LINE L2 -3 3310 3181 2019 149 0 0 chr5 44613702 44613997 -158471535 + AluJo SINE Alu 1 295 -17 1331 288 75 57 chr5 44613997 44614678 -158470854 - L2 LINE L2 -132 3181 2409 2113 173 60 58 chr5 44614726 44615224 -158470308 - LTR54 LTR ERV1 -11 499 1 1597 229 234 3 chr5 44615253 44615908 -158469624 - L2 LINE L2 -942 2372 1567 333 0 0 0 chr5 44616870 44616907 -158468625 + (A)n Simple_repeat Simple_repeat 1 37 0 592 192 0 25 chr5 44616966 44617086 -158468446 + AluJb SINE Alu 5 121 -191 505 52 26 0 chr5 44617086 44617163 -158468369 + (TA)n Simple_repeat Simple_repeat 2 80 0 2287 39 89 0 chr5 44617316 44617597 -158467935 + AluY SINE Alu 2 307 -4 390 21 0 0 chr5 44617796 44617843 -158467689 + (CA)n Simple_repeat Simple_repeat 2 48 0 1062 163 6 6 chr5 44617851 44618029 -158467503 + AluJb SINE Alu 126 303 -9 24 53 0 0 chr5 44618565 44618603 -158466929 + AT_rich Low_complexity Low_complexity 1 38 0 2259 115 3 6 chr5 44619205 44619518 -158466014 + AluSx SINE Alu 1 312 0 213 245 20 0 chr5 44619701 44619750 -158465782 - L2 LINE L2 -500 2814 2765 1441 208 144 49 chr5 44620248 44620585 -158464947 - L1MC5 LINE L1 -49 7912 7609 2309 103 3 0 chr5 44620585 44620895 -158464637 - AluSq SINE Alu -2 311 1 1441 208 144 49 chr5 44620895 44621216 -158464316 - L1MC5 LINE L1 -352 7609 7191 24 53 0 0 chr5 44621538 44621576 -158463956 + AT_rich Low_complexity Low_complexity 1 38 0 539 371 91 48 chr5 44621828 44623494 -158462038 - L2 LINE L2 -587 2727 990 1215 146 0 6 chr5 44623537 44623715 -158461817 - AluSx SINE Alu -12 300 124 478 143 13 0 chr5 44623715 44623792 -158461740 + MADE1 DNA Mariner 3 80 0 402 149 0 0 chr5 44623792 44623859 -158461673 - AluSx SINE Alu -175 127 61 340 278 88 46 chr5 44624529 44625260 -158460272 - L1ME LINE L1 -656 5514 4754 22 0 0 0 chr5 44625732 44625754 -158459778 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 44626276 44626298 -158459234 + AT_rich Low_complexity Low_complexity 1 22 0 201 238 0 29 chr5 44627304 44627409 -158458123 + A-rich Low_complexity Low_complexity 3 104 0 29 0 0 0 chr5 44627591 44627620 -158457912 + AT_rich Low_complexity Low_complexity 1 29 0 451 276 55 7 chr5 44628312 44628457 -158457075 + MIR SINE MIR 37 188 -74 2257 100 0 0 chr5 44628646 44628945 -158456587 + AluY SINE Alu 1 299 -12 21 0 0 0 chr5 44629177 44629198 -158456334 + AT_rich Low_complexity Low_complexity 1 21 0 319 222 20 30 chr5 44629221 44629320 -158456212 + HsTC2 DNA Tc2 1795 1892 -6 329 322 0 26 chr5 44631450 44631602 -158453930 + CT-rich Low_complexity Low_complexity 1 148 0 512 59 0 0 chr5 44633714 44633782 -158451750 - Alu SINE Alu -7 303 236 29 47 0 0 chr5 44633997 44634040 -158451492 + AT_rich Low_complexity Low_complexity 1 43 0 2265 109 3 3 chr5 44634100 44634411 -158451121 - AluSp SINE Alu -2 311 1 1994 151 3 7 chr5 44634468 44634773 -158450759 - AluJo SINE Alu -6 306 3 245 309 0 0 chr5 44635429 44635523 -158450009 + (CA)n Simple_repeat Simple_repeat 1 94 0 438 53 0 0 chr5 44636222 44636279 -158449253 + (TG)n Simple_repeat Simple_repeat 1 57 0 246 333 26 0 chr5 44637007 44637085 -158448447 + MIR SINE MIR 31 110 -152 198 0 0 0 chr5 44639989 44640011 -158445521 + (T)n Simple_repeat Simple_repeat 1 22 0 27 29 0 0 chr5 44640197 44640231 -158445301 + AT_rich Low_complexity Low_complexity 1 34 0 27 29 0 0 chr5 44640476 44640510 -158445022 + AT_rich Low_complexity Low_complexity 1 34 0 480 244 15 134 chr5 44640564 44640765 -158444767 + MER5B DNA MER1_type 2 178 0 230 234 0 0 chr5 44640893 44640940 -158444592 + CT-rich Low_complexity Low_complexity 2 48 0 249 33 0 0 chr5 44640940 44640970 -158444562 + (CA)n Simple_repeat Simple_repeat 1 30 0 29 28 0 0 chr5 44641835 44641871 -158443661 + AT_rich Low_complexity Low_complexity 1 36 0 348 348 33 17 chr5 44642565 44642746 -158442786 + MER5A DNA MER1_type 6 189 0 1819 164 0 19 chr5 44642988 44643299 -158442233 + AluJo SINE Alu 1 305 -7 256 213 49 0 chr5 44644380 44644441 -158441091 - MER5A DNA MER1_type -108 81 18 652 282 125 35 chr5 44644979 44645298 -158440234 - LTR16C LTR ERVL -69 422 75 190 378 18 18 chr5 44645554 44645665 -158439867 + L2 LINE L2 2599 2709 -605 2084 135 3 0 chr5 44645796 44646093 -158439439 + AluSx SINE Alu 1 298 -14 26 30 0 0 chr5 44650885 44650918 -158434614 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 44652436 44652460 -158433072 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 44652893 44652916 -158432616 + AT_rich Low_complexity Low_complexity 1 23 0 250 264 120 35 chr5 44654904 44655018 -158430514 + MIR SINE MIR 57 185 -23 24 0 0 0 chr5 44655833 44655857 -158429675 + AT_rich Low_complexity Low_complexity 1 24 0 244 271 0 0 chr5 44655919 44655967 -158429565 + L2 LINE L2 1370 1417 -1897 1486 192 42 3 chr5 44655968 44656255 -158429277 + AluJb SINE Alu 1 298 -14 242 293 84 37 chr5 44656613 44656804 -158428728 + L2 LINE L2 1565 1764 -1550 1061 285 79 36 chr5 44656834 44657279 -158428253 + LTR16B LTR ERVL 1 464 0 277 370 29 7 chr5 44657282 44657420 -158428112 + MER5B DNA MER1_type 34 174 -4 225 294 73 51 chr5 44657511 44657688 -158427844 + L2 LINE L2 2303 2483 -831 21 0 0 0 chr5 44657787 44657808 -158427724 + AT_rich Low_complexity Low_complexity 1 21 0 377 298 61 0 chr5 44657879 44658010 -158427522 - L2 LINE L2 -1336 1978 1840 383 322 112 19 chr5 44658031 44658289 -158427243 - LTR16A LTR ERVL -21 429 148 2324 86 0 0 chr5 44658847 44659139 -158426393 + AluY SINE Alu 1 292 -19 1792 141 11 4 chr5 44659191 44659468 -158426064 - AluJb SINE Alu -23 289 11 599 276 149 69 chr5 44659501 44659767 -158425765 - Charlie8 DNA MER1_type -1916 501 258 1027 272 78 36 chr5 44659767 44660264 -158425268 + LTR33 LTR ERVL 1 518 -3 599 276 149 69 chr5 44660264 44660461 -158425071 - Charlie8 DNA MER1_type -2159 258 1 1135 178 85 27 chr5 44661417 44661430 -158424102 - LTR16A1 LTR ERVL 0 457 446 1213 181 30 124 chr5 44661430 44661833 -158423699 - MLT1A1 LTR MaLR 0 365 1 1135 178 85 27 chr5 44661833 44662077 -158423455 - LTR16A1 LTR ERVL -11 446 185 2313 88 0 16 chr5 44662088 44662394 -158423138 + AluSg SINE Alu 1 301 -9 206 230 0 61 chr5 44662696 44662844 -158422688 + (TTTAA)n Simple_repeat Simple_repeat 3 141 0 3839 130 12 20 chr5 44663020 44663043 -158422489 + L1MA4A LINE L1 5664 5686 -617 1581 152 56 26 chr5 44663043 44663346 -158422186 + AluJo SINE Alu 1 312 0 3839 130 12 20 chr5 44663346 44663961 -158421571 + L1MA4A LINE L1 5686 6297 -6 588 266 47 34 chr5 44664010 44664243 -158421289 - MARNA DNA Mariner -168 418 183 24 0 0 0 chr5 44664279 44664303 -158421229 + AT_rich Low_complexity Low_complexity 1 24 0 2274 112 0 3 chr5 44664593 44664905 -158420627 - AluSx SINE Alu -1 311 1 331 276 14 28 chr5 44664996 44665141 -158420391 - L1M4 LINE L1 -417 5767 5625 333 237 26 9 chr5 44665197 44665311 -158420221 - L1M4 LINE L1 -1035 5111 4996 937 212 47 0 chr5 44665412 44665605 -158419927 - AluJo SINE Alu -110 202 1 275 134 16 45 chr5 44665637 44665703 -158419829 + Alu SINE Alu 246 289 -13 333 273 64 67 chr5 44665760 44666639 -158418893 - L1MEd LINE L1 -5154 965 40 2445 70 3 0 chr5 44666742 44667043 -158418489 - AluY SINE Alu -9 302 1 3206 179 13 4 chr5 44668052 44668609 -158416923 + MER68 LTR ERV1 1 562 0 628 302 90 14 chr5 44668612 44668824 -158416708 + MLT2E LTR ERVL 36 263 -365 1986 142 67 20 chr5 44668833 44669179 -158416353 - THE1C LTR MaLR 0 375 14 13985 170 26 22 chr5 44669678 44673503 -158412029 - L1MA4A LINE L1 -6 6999 3154 680 207 0 8 chr5 44673503 44673624 -158411908 - FLAM_C SINE Alu -13 120 1 13985 170 26 22 chr5 44673624 44673894 -158411638 - L1MA4A LINE L1 -3851 3154 2887 7523 207 122 5 chr5 44673890 44675475 -158410057 - L1MA4A LINE L1 -5078 1771 2 * 583 323 84 37 chr5 44675482 44675885 -158409647 - L1MEd LINE L1 -4701 1430 1009 1188 233 28 6 chr5 44675951 44676269 -158409263 - L1ME1 LINE L1 -3 6232 5908 2291 94 0 19 chr5 44676270 44676577 -158408955 + AluSg SINE Alu 1 301 -9 1341 97 0 0 chr5 44676577 44676752 -158408780 + AluSp SINE Alu 134 308 -5 2258 244 45 13 chr5 44676752 44677784 -158407748 - L1ME1 LINE L1 -314 5921 4849 2108 136 33 14 chr5 44677784 44678152 -158407380 + THE1C LTR MaLR 1 375 0 2258 244 45 13 chr5 44678152 44678322 -158407210 - L1ME1 LINE L1 -1386 4849 4686 608 265 17 9 chr5 44678325 44678555 -158406977 - L1ME1 LINE L1 -2704 3511 3280 265 302 79 101 chr5 44678534 44678987 -158406545 - L1ME1 LINE L1 -5089 1307 845 * 2307 107 0 0 chr5 44678987 44679286 -158406246 - AluSg SINE Alu -11 299 1 265 302 79 101 chr5 44679286 44680124 -158405408 - L1ME1 LINE L1 -5551 845 45 586 274 79 27 chr5 44680160 44680452 -158405080 - L1MEd LINE L1 -5291 828 522 228 200 0 0 chr5 44680647 44680697 -158404835 + A-rich Low_complexity Low_complexity 1 50 0 2144 228 116 60 chr5 44680699 44681347 -158404185 + Charlie7 DNA MER1_type 109 719 -1893 1341 225 39 3 chr5 44681347 44681514 -158404018 - AluJo SINE Alu -13 299 116 213 39 0 0 chr5 44681514 44681540 -158403992 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1341 225 39 3 chr5 44681540 44681657 -158403875 - AluJo SINE Alu -196 116 5 2144 228 116 60 chr5 44681657 44682969 -158402563 + Charlie7 DNA MER1_type 719 2341 -271 283 287 0 21 chr5 44683274 44683368 -158402164 - L1ME4a LINE L1 -67 6054 5963 189 347 40 32 chr5 44684611 44684735 -158400797 + L3b LINE CR1 1287 1411 -172 229 268 148 55 chr5 44685166 44685550 -158399982 - L1ME4a LINE L1 -8 6113 5694 335 336 38 30 chr5 44685617 44685748 -158399784 - L2 LINE L2 0 3313 3182 612 0 0 0 chr5 44685836 44685904 -158399628 + (TG)n Simple_repeat Simple_repeat 2 69 0 36 62 0 0 chr5 44686685 44686749 -158398783 + GC_rich Low_complexity Low_complexity 1 64 0 357 208 76 145 chr5 44686921 44687224 -158398308 - L1M2 LINE L1 -5894 955 674 523 322 58 33 chr5 44689479 44689721 -158395811 + MIR SINE MIR 9 256 -6 29 70 0 0 chr5 44690528 44690585 -158394947 + AT_rich Low_complexity Low_complexity 1 57 0 2756 10 0 13 chr5 44690696 44691005 -158394527 - AluYb8 SINE Alu -13 305 1 202 323 31 55 chr5 44691370 44691497 -158394035 - L2 LINE L2 -630 2684 2561 189 248 147 115 chr5 44692116 44692273 -158393259 - MIR SINE MIR -32 230 69 209 351 59 86 chr5 44692920 44693259 -158392273 + L2 LINE L2 2891 3220 -52 203 277 239 23 chr5 44693346 44693476 -158392056 - L2 LINE L2 -834 2480 2323 2091 169 96 0 chr5 44693718 44694102 -158391430 + MSTA LTR MaLR 8 428 0 9739 157 12 5 chr5 44694102 44695741 -158389791 + MSTA-int LTR MaLR 1 1651 0 2094 168 75 0 chr5 44695741 44696139 -158389393 + MSTA LTR MaLR 1 428 0 270 146 21 0 chr5 44696238 44696286 -158389246 + MIR SINE MIR 94 142 -120 21 0 0 0 chr5 44697201 44697222 -158388310 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44697424 44697445 -158388087 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44698657 44698678 -158386854 + AT_rich Low_complexity Low_complexity 1 21 0 372 312 107 51 chr5 44699698 44699932 -158385600 - L3 LINE CR1 -23 1554 1308 235 280 0 0 chr5 44700028 44700078 -158385454 - L2 LINE L2 -7 3306 3257 322 303 78 37 chr5 44700141 44700359 -158385173 - MIR SINE MIR -27 235 9 315 299 184 25 chr5 44701160 44701361 -158384171 + MIR SINE MIR 1 233 -29 991 194 37 40 chr5 44701656 44701929 -158383603 - L1ME3A LINE L1 -5 6165 5894 278 152 0 0 chr5 44701925 44701971 -158383561 + L1ME3 LINE L1 5920 5965 -197 * 185 369 0 0 chr5 44704109 44704174 -158381358 - L2 LINE L2 0 3272 3208 942 274 133 39 chr5 44704241 44704518 -158381014 + L2 LINE L2 2809 3059 -254 1782 160 3 28 chr5 44704518 44704837 -158380695 - AluJb SINE Alu 0 312 2 942 274 133 39 chr5 44704837 44705019 -158380513 + L2 LINE L2 3059 3311 -2 469 355 150 15 chr5 44705020 44705426 -158380106 + L2 LINE L2 2228 2688 -626 434 280 93 33 chr5 44705559 44705773 -158379759 - L2 LINE L2 -7 3306 3080 335 288 208 15 chr5 44705836 44706100 -158379432 - L2 LINE L2 -339 2975 2661 24 0 0 0 chr5 44706755 44706779 -158378753 + AT_rich Low_complexity Low_complexity 1 24 0 1433 88 0 5 chr5 44707092 44707284 -158378248 - AluSg/x SINE Alu -13 299 109 2539 30 7 3 chr5 44707284 44707580 -158377952 - AluY SINE Alu -14 297 1 221 180 200 0 chr5 44707616 44707666 -158377866 - L2 LINE L2 -3 3310 3251 249 248 144 32 chr5 44707756 44707881 -158377651 - MER117 DNA MER1_type -53 144 6 1405 230 42 3 chr5 44708744 44708826 -158376706 - Tigger5 DNA MER2_type -2019 304 227 1598 161 18 26 chr5 44708826 44709099 -158376433 - AluJo SINE Alu -41 271 1 1405 230 42 3 chr5 44709099 44709303 -158376229 - Tigger5 DNA MER2_type -2096 227 7 2101 97 7 20 chr5 44709425 44709724 -158375808 - AluSx SINE Alu -17 295 1 250 360 24 0 chr5 44709774 44709899 -158375633 + MIR SINE MIR 104 231 -31 360 283 17 23 chr5 44709945 44710118 -158375414 - L1ME3A LINE L1 -396 5774 5603 225 154 0 0 chr5 44710122 44710161 -158375371 + (TG)n Simple_repeat Simple_repeat 1 39 0 730 205 36 98 chr5 44710281 44710555 -158374977 - L1MC5 LINE L1 -44 7917 7666 2055 133 7 3 chr5 44710555 44710864 -158374668 + AluSx SINE Alu 1 310 -2 730 205 36 98 chr5 44710864 44710925 -158374607 - L1MC5 LINE L1 -295 7666 7603 215 106 43 0 chr5 44710974 44711021 -158374511 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 553 246 71 54 chr5 44711134 44711484 -158374048 - L1MEd LINE L1 -4862 1257 902 769 271 41 23 chr5 44711602 44711820 -158373712 + MER58A DNA MER1_type 1 222 -2 322 290 141 75 chr5 44712038 44712372 -158373160 - L1MEd LINE L1 -5504 615 260 2353 190 55 11 chr5 44712441 44712944 -158372588 - MER68 LTR ERV1 -2 603 1 373 272 48 0 chr5 44712983 44713086 -158372446 - MER5A DNA MER1_type -78 111 4 331 225 95 122 chr5 44713377 44713599 -158371933 + MER46C DNA MER2_type 1 216 -122 2240 109 15 18 chr5 44713674 44714012 -158371520 + MER1B DNA MER1_type 1 337 0 1502 178 6 55 chr5 44714797 44715123 -158370409 - AluJo SINE Alu -2 310 1 324 0 0 0 chr5 44715126 44715162 -158370370 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 366 200 154 9 chr5 44716911 44717021 -158368511 - L1ME3A LINE L1 0 6170 6045 4006 130 61 38 chr5 44717048 44717163 -158368369 - L1MA6 LINE L1 0 6300 6189 1914 137 158 21 chr5 44717163 44717536 -158367996 - MSTC LTR MaLR -4 424 1 4006 130 61 38 chr5 44717536 44718227 -158367305 - L1MA6 LINE L1 -111 6189 5476 429 152 0 0 chr5 44718228 44718294 -158367238 - AluJ/FRAM SINE Alu -26 286 221 247 111 89 0 chr5 44718295 44718340 -158367192 - L1MA6 LINE L1 -808 5489 5441 305 240 0 83 chr5 44718409 44718505 -158367027 - L2 LINE L2 -1 3312 3225 546 233 83 47 chr5 44718643 44718836 -158366696 + MIR SINE MIR 19 218 -44 247 237 17 17 chr5 44719029 44719088 -158366444 - MER5A DNA MER1_type -7 182 124 192 277 0 31 chr5 44719045 44719110 -158366422 + MER5A DNA MER1_type 35 97 -92 * 861 145 0 7 chr5 44719223 44719361 -158366171 - FRAM SINE Alu -7 169 33 218 360 68 14 chr5 44719479 44719626 -158365906 + L2 LINE L2 2368 2522 -792 377 281 33 25 chr5 44720067 44720188 -158365344 - L2 LINE L2 -5 3308 3187 29 28 0 0 chr5 44720472 44720508 -158365024 + AT_rich Low_complexity Low_complexity 1 36 0 34 96 0 0 chr5 44720594 44720698 -158364834 + AT_rich Low_complexity Low_complexity 1 104 0 20945 33 5 0 chr5 44720710 44724105 -158361427 - L1PA4 LINE L1 -3 6152 2815 34353 46 2 2 chr5 44724205 44728466 -158357066 - L1P LINE L1 -1882 4264 1 943 175 35 5 chr5 44728948 44729148 -158356384 - L1PA16 LINE L1 -3 6163 5958 2111 113 0 30 chr5 44729234 44729535 -158355997 + AluSg SINE Alu 1 292 -18 288 314 48 0 chr5 44729676 44729781 -158355751 + MER94 DNA DNA 16 125 -9 1236 218 23 0 chr5 44730056 44730322 -158355210 - L1MCa LINE L1 -6135 291 20 464 318 150 13 chr5 44730496 44730729 -158354803 + L3 LINE CR1 1230 1494 -83 322 272 98 11 chr5 44732063 44732155 -158353377 - L2 LINE L2 -15 3298 3199 359 335 95 20 chr5 44732941 44733141 -158352391 - MIR SINE MIR 0 262 48 821 221 88 32 chr5 44733558 44733878 -158351654 - L1ME2 LINE L1 -9 6165 5811 897 163 0 0 chr5 44733897 44734044 -158351488 - FRAM SINE Alu -30 146 1 1795 221 101 21 chr5 44734047 44734313 -158351219 - L1ME2 LINE L1 -343 5821 5578 2837 10 0 0 chr5 44734313 44734622 -158350910 + AluYa5 SINE Alu 1 309 -2 1795 221 101 21 chr5 44734622 44734968 -158350564 - L1ME2 LINE L1 -586 5578 5163 21 0 0 0 chr5 44735293 44735314 -158350218 + AT_rich Low_complexity Low_complexity 1 21 0 2277 91 3 3 chr5 44735772 44736069 -158349463 - AluSp SINE Alu -16 297 1 924 168 0 46 chr5 44736410 44736606 -158348926 - AluJb SINE Alu 0 312 129 1542 202 22 28 chr5 44736923 44737284 -158348248 + MLT1A1 LTR MaLR 1 359 -6 280 230 27 14 chr5 44737315 44737389 -158348143 + MER58B DNA MER1_type 230 304 -37 465 238 39 61 chr5 44737734 44737915 -158347617 + L2 LINE L2 3133 3309 -4 2282 138 12 3 chr5 44738508 44738842 -158346690 + MER1B DNA MER1_type 1 337 -2 289 179 18 18 chr5 44739286 44739342 -158346190 + MER58 DNA MER1_type 1 56 -159 264 272 62 36 chr5 44739361 44739556 -158345976 - L1MCa LINE L1 -4822 1604 1405 433 268 30 83 chr5 44739580 44739916 -158345616 - L1MCa LINE L1 -4783 1645 1328 258 276 14 2 chr5 44740408 44740508 -158345024 - L1MCa LINE L1 -5045 1383 1242 1952 161 31 6 chr5 44740511 44740860 -158344672 - MER47A DNA MER2_type -7 359 2 1533 160 45 120 chr5 44740979 44741405 -158344127 - MSTD LTR MaLR -2 394 1 13561 132 50 20 chr5 44742074 44744400 -158341132 - Tigger1 DNA MER2_type 0 2418 24 437 236 19 19 chr5 44744803 44744909 -158340623 + MER5A DNA MER1_type 4 109 -80 1146 184 61 19 chr5 44745725 44746035 -158339497 - MER33 DNA MER1_type -1 323 1 399 304 23 18 chr5 44746320 44746491 -158339041 + CT-rich Low_complexity Low_complexity 1 172 0 183 273 0 23 chr5 44746932 44746976 -158338556 + L2 LINE L2 3209 3251 -21 1134 200 5 14 chr5 44747124 44747344 -158338188 - MER20 DNA MER1_type 0 219 2 1811 157 61 0 chr5 44748594 44748888 -158336644 - MER7A DNA MER2_type -36 310 1 252 250 0 0 chr5 44748929 44748985 -158336547 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 284 363 78 16 chr5 44749623 44749879 -158335653 - MLT1K LTR MaLR -36 552 281 1781 112 18 185 chr5 44750326 44750774 -158334758 - THE1C LTR MaLR 0 375 3 10549 101 14 31 chr5 44750776 44752384 -158333148 - THE1C-int LTR MaLR 0 1580 1 1586 134 64 55 chr5 44752384 44752803 -158332729 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr5 44753989 44754012 -158331520 + AT_rich Low_complexity Low_complexity 1 23 0 428 250 9 35 chr5 44754294 44754410 -158331122 + MIR SINE MIR 28 140 -122 22 0 0 0 chr5 44754865 44754887 -158330645 + AT_rich Low_complexity Low_complexity 1 22 0 200 240 8 47 chr5 44754910 44755039 -158330493 + (TATAA)n Simple_repeat Simple_repeat 5 128 0 1901 163 62 19 chr5 44755264 44755638 -158329894 + MLT1B LTR MaLR 1 390 0 528 93 0 0 chr5 44755997 44756072 -158329460 + (TCCCC)n Simple_repeat Simple_repeat 5 79 0 706 285 100 56 chr5 44757041 44757666 -158327866 + L1MEc LINE L1 802 1398 -4817 2336 81 3 0 chr5 44757666 44757961 -158327571 + AluSp SINE Alu 1 296 -17 2200 89 0 23 chr5 44757971 44758273 -158327259 + AluSx SINE Alu 1 295 -17 706 285 100 56 chr5 44758273 44758626 -158326906 + L1MEc LINE L1 1406 1663 -4552 1984 242 142 44 chr5 44760268 44760319 -158325213 - L1ME3 LINE L1 -30 6412 6367 180 0 0 0 chr5 44760319 44760339 -158325193 + (TA)n Simple_repeat Simple_repeat 1 20 0 1984 242 142 44 chr5 44760339 44762234 -158323298 - L1ME3 LINE L1 -75 6367 4277 612 289 47 30 chr5 44762243 44762648 -158322884 - L1ME3 LINE L1 -2324 4102 3691 * 768 255 63 12 chr5 44762617 44762950 -158322582 - L1ME3 LINE L1 -3653 2773 2424 269 237 139 35 chr5 44763056 44763229 -158322303 - L1ME3 LINE L1 -4176 2431 2241 388 309 96 45 chr5 44763411 44763686 -158321846 - L1ME3 LINE L1 -5082 1525 1217 2071 105 6 19 chr5 44763686 44764001 -158321531 - AluSx SINE Alu -1 311 1 388 309 96 45 chr5 44764001 44764171 -158321361 - L1ME3 LINE L1 -5390 1217 1057 435 173 0 0 chr5 44764248 44764329 -158321203 + AluS SINE Alu 1 81 -232 2180 104 0 13 chr5 44765326 44765642 -158319890 - AluSx SINE Alu 0 312 1 236 208 19 0 chr5 44765705 44765758 -158319774 - L1ME3 LINE L1 -5473 953 900 1301 137 0 5 chr5 44765888 44766078 -158319454 + AluSx SINE Alu 1 189 -123 234 333 33 17 chr5 44766421 44766541 -158318991 - L1ME3 LINE L1 -5981 626 505 28 48 0 0 chr5 44767663 44767705 -158317827 + AT_rich Low_complexity Low_complexity 1 42 0 1535 216 106 30 chr5 44768653 44768791 -158316741 - Charlie1b DNA MER1_type -2292 469 343 189 0 0 0 chr5 44768791 44768812 -158316720 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2531 90 22 20 chr5 44768812 44769214 -158316318 - L1PB2 LINE L1 -9 6142 5740 1535 216 106 30 chr5 44769214 44769509 -158316023 - Charlie1b DNA MER1_type -2417 344 2 297 0 0 0 chr5 44769921 44769954 -158315578 + (T)n Simple_repeat Simple_repeat 1 33 0 1568 139 51 83 chr5 44769978 44770177 -158315355 - MER46B DNA MER2_type -2495 236 178 2267 64 0 27 chr5 44770177 44770473 -158315059 - AluY SINE Alu -23 288 1 1568 139 51 83 chr5 44770473 44770646 -158314886 - MER46B DNA MER2_type -2553 178 1 28 0 0 0 chr5 44770649 44770677 -158314855 + AT_rich Low_complexity Low_complexity 1 28 0 197 241 74 0 chr5 44771138 44771192 -158314340 - MIR SINE MIR -110 98 41 477 248 64 28 chr5 44771769 44771910 -158313622 - MIR3 SINE MIR -13 195 50 484 57 0 101 chr5 44773486 44773805 -158311727 + (TA)n Simple_repeat Simple_repeat 1 286 0 226 189 54 27 chr5 44773807 44773881 -158311651 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 8115 80 19 3 chr5 44773881 44775765 -158309767 - L1PA7 LINE L1 -3 6151 4232 13408 101 18 2 chr5 44775765 44777733 -158307799 + L1PA7 LINE L1 2234 4233 -1913 1590 159 107 20 chr5 44777974 44778319 -158307213 - THE1C LTR MaLR 0 375 1 2386 77 0 3 chr5 44778378 44778675 -158306857 + AluSx SINE Alu 1 296 -16 1212 145 30 0 chr5 44779025 44779225 -158306307 - MER2 DNA MER2_type -139 206 1 1859 76 50 29 chr5 44779264 44779541 -158305991 + AluSc SINE Alu 1 283 -26 2280 83 3 16 chr5 44780380 44780693 -158304839 - AluSc SINE Alu 0 309 1 302 294 126 14 chr5 44780854 44780997 -158304535 + L1M4 LINE L1 4088 4246 -1900 670 236 123 14 chr5 44781195 44781407 -158304125 + L1ME2 LINE L1 5930 6164 0 343 192 10 10 chr5 44781515 44781614 -158303918 + (TA)n Simple_repeat Simple_repeat 1 99 0 237 304 80 0 chr5 44782033 44782145 -158303387 + L1P LINE L1 5245 5365 -781 21 0 0 0 chr5 44782534 44782555 -158302977 + AT_rich Low_complexity Low_complexity 1 21 0 1777 181 0 3 chr5 44783508 44783812 -158301720 - AluJb SINE Alu -9 303 1 394 285 94 40 chr5 44784050 44784401 -158301131 + L1MEc LINE L1 782 1151 -5245 861 221 77 31 chr5 44784609 44784831 -158300701 + MLT1F LTR MaLR 257 488 -54 261 255 69 0 chr5 44784849 44784951 -158300581 + L1MEc LINE L1 1712 1820 -4576 703 206 0 30 chr5 44785080 44785211 -158300321 + FRAM SINE Alu 20 146 -30 240 247 11 22 chr5 44785217 44785306 -158300226 + L1M4 LINE L1 4263 4350 -1796 496 199 122 39 chr5 44785342 44785498 -158300034 + L1ME3A LINE L1 5931 6099 -71 1937 88 51 11 chr5 44786509 44786782 -158298750 + AluSx SINE Alu 22 305 -7 1109 244 153 11 chr5 44786986 44787500 -158298032 - MLT1E2 LTR MaLR 0 624 14 384 288 91 59 chr5 44788245 44788521 -158297011 - L1MEc LINE L1 -5082 1525 1234 2197 101 0 19 chr5 44788521 44788839 -158296693 - AluSx SINE Alu 0 312 1 384 288 91 59 chr5 44788839 44788902 -158296630 - L1MEc LINE L1 -5373 1234 1175 236 208 19 0 chr5 44788902 44788955 -158296577 - L1MEc LINE L1 -5473 953 900 1266 136 0 11 chr5 44789085 44789276 -158296256 + AluSx SINE Alu 1 189 -123 234 333 33 17 chr5 44789620 44789740 -158295792 - L1MEc LINE L1 -5981 626 505 28 48 0 0 chr5 44790862 44790904 -158294628 + AT_rich Low_complexity Low_complexity 1 42 0 1504 216 106 30 chr5 44791852 44791990 -158293542 - Charlie1b DNA MER1_type -2292 469 343 189 0 0 0 chr5 44791990 44792011 -158293521 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2557 87 22 20 chr5 44792011 44792413 -158293119 - L1PB2 LINE L1 -9 6142 5740 1504 216 106 30 chr5 44792413 44792708 -158292824 - Charlie1b DNA MER1_type -2417 344 2 414 0 0 0 chr5 44793127 44793173 -158292359 + (T)n Simple_repeat Simple_repeat 1 46 0 1546 139 51 83 chr5 44793197 44793396 -158292136 - MER46B DNA MER2_type -2495 236 178 2278 68 0 27 chr5 44793396 44793692 -158291840 - AluY SINE Alu -23 288 1 1546 139 51 83 chr5 44793692 44793865 -158291667 - MER46B DNA MER2_type -2553 178 1 28 0 0 0 chr5 44793868 44793896 -158291636 + AT_rich Low_complexity Low_complexity 1 28 0 202 241 74 0 chr5 44794357 44794411 -158291121 - MIR SINE MIR -110 98 41 468 234 64 28 chr5 44794988 44795129 -158290403 - MIR3 SINE MIR -13 195 50 441 59 0 103 chr5 44796701 44797044 -158288488 + (TA)n Simple_repeat Simple_repeat 1 307 0 206 147 7 84 chr5 44797056 44797199 -158288333 + (TA)n Simple_repeat Simple_repeat 1 132 0 8146 78 19 3 chr5 44797199 44799083 -158286449 - L1PA7 LINE L1 -3 6151 4232 16051 46 17 3 chr5 44799083 44801243 -158284289 + L1P LINE L1 2234 4423 -1723 357 59 0 0 chr5 44801343 44801394 -158284138 + L1M4 LINE L1 5134 5184 -962 599 199 23 0 chr5 44801403 44801534 -158283998 + L1MA10 LINE L1 6191 6324 -10 1028 150 12 0 chr5 44801573 44801740 -158283792 - AluJ SINE Alu -16 296 128 1367 202 35 39 chr5 44801776 44802218 -158283314 + L1MA9 LINE L1 5189 5631 -681 1865 116 60 28 chr5 44802218 44802502 -158283030 + AluSx SINE Alu 1 293 -19 1367 202 35 39 chr5 44802502 44802608 -158282924 + L1MA9 LINE L1 5631 6156 -156 830 128 0 8 chr5 44802772 44802897 -158282635 - AluJ SINE Alu -188 124 1 233 331 105 0 chr5 44803060 44803184 -158282348 - L2 LINE L2 -2823 491 355 1677 164 35 3 chr5 44803525 44803811 -158281721 - AluJo SINE Alu -17 295 1 27 0 0 0 chr5 44804108 44804135 -158281397 + AT_rich Low_complexity Low_complexity 1 27 0 487 311 164 39 chr5 44804297 44805167 -158280365 + L2 LINE L2 515 1493 -1821 685 188 43 0 chr5 44805215 44805353 -158280179 + MLT1D LTR MaLR 10 153 -352 13521 75 11 18 chr5 44805460 44807363 -158278169 + L1P LINE L1 826 2714 -3432 3025 234 33 30 chr5 44808575 44809705 -158275827 - L1 LINE L1 -2628 3518 2386 1527 220 57 34 chr5 44809951 44810410 -158275122 + L1MC4a LINE L1 7320 8026 -16 268 172 35 0 chr5 44810441 44810499 -158275033 + L1MD3 LINE L1 7925 7984 -11 7899 47 17 2 chr5 44811034 44812083 -158273449 - L1P LINE L1 -1241 4905 3841 7316 195 35 33 chr5 44812202 44814093 -158271439 + L1 LINE L1 2981 4876 -1270 14752 66 3 6 chr5 44819394 44821403 -158264129 + L1P LINE L1 819 2822 -3324 21 36 0 0 chr5 44823752 44823780 -158261752 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 44824150 44824172 -158261360 + AT_rich Low_complexity Low_complexity 1 22 0 249 284 0 0 chr5 44830028 44830102 -158255430 + T-rich Low_complexity Low_complexity 2 75 0 32 67 0 0 chr5 44833195 44833255 -158252277 + AT_rich Low_complexity Low_complexity 1 60 0 23 33 0 0 chr5 44833379 44833409 -158252123 + AT_rich Low_complexity Low_complexity 1 30 0 780 228 41 0 chr5 44836324 44836495 -158249037 - MER5B DNA MER1_type 0 178 1 225 0 0 0 chr5 44837604 44837629 -158247903 + (CA)n Simple_repeat Simple_repeat 2 26 0 2461 81 0 0 chr5 44839207 44839514 -158246018 + AluY SINE Alu 1 307 -4 472 142 236 68 chr5 44839523 44839671 -158245861 + MER20 DNA MER1_type 46 218 -1 276 242 40 166 chr5 44841871 44842148 -158243384 + Charlie2 DNA MER1_type 1 242 -2620 2031 197 103 65 chr5 44842238 44842864 -158242668 + Charlie2 DNA MER1_type 1909 2583 -279 563 154 0 0 chr5 44842864 44842955 -158242577 + L1MC1 LINE L1 6243 6333 0 2031 197 103 65 chr5 44842955 44843246 -158242286 + Charlie2 DNA MER1_type 2583 2861 -1 1389 207 108 13 chr5 44843449 44843763 -158241769 + MER2 DNA MER2_type 1 344 0 3498 95 24 51 chr5 44844170 44844802 -158240730 - SVA Other Other -339 1047 433 695 183 9 18 chr5 44845041 44845269 -158240263 + CT-rich Low_complexity Low_complexity 1 225 0 807 154 58 19 chr5 44845736 44845892 -158239640 - THE1C LTR MaLR -213 162 1 25 51 0 0 chr5 44847030 44847069 -158238463 + AT_rich Low_complexity Low_complexity 1 39 0 216 255 0 0 chr5 44847265 44847316 -158238216 + CT-rich Low_complexity Low_complexity 2 52 0 381 207 9 20 chr5 44847535 44847646 -158237886 - L1MA4A LINE L1 -201 6102 5976 22 0 0 0 chr5 44848060 44848082 -158237450 + AT_rich Low_complexity Low_complexity 1 22 0 244 250 0 0 chr5 44848586 44848642 -158236890 + MER5B DNA MER1_type 2 57 -121 581 315 73 76 chr5 44849170 44849707 -158235825 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 44849910 44849943 -158235589 + AT_rich Low_complexity Low_complexity 1 33 0 738 239 0 5 chr5 44850215 44850416 -158235116 - L1P LINE L1 -989 5157 4958 3064 148 16 63 chr5 44850416 44851013 -158234519 + L1PB4 LINE L1 5567 6154 -2 334 295 0 18 chr5 44851360 44851526 -158234006 - L1MCa LINE L1 -5239 1187 1025 280 285 70 50 chr5 44851718 44852020 -158233512 - L1MEd LINE L1 -4908 1211 904 238 0 81 0 chr5 44852775 44852812 -158232720 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 441 210 10 0 chr5 44853024 44853124 -158232408 - L1MA8 LINE L1 -201 6090 5990 281 278 89 58 chr5 44854038 44854229 -158231303 + L2 LINE L2 3117 3313 0 31 76 0 0 chr5 44854734 44854800 -158230732 + AT_rich Low_complexity Low_complexity 1 66 0 221 231 0 31 chr5 44854866 44854931 -158230601 + (TA)n Simple_repeat Simple_repeat 1 63 0 545 321 110 51 chr5 44857875 44858527 -158227005 + L2 LINE L2 2157 2847 -467 1103 156 29 37 chr5 44858986 44859230 -158226302 + L1MB5 LINE L1 5929 6170 -4 1821 102 25 4 chr5 44860634 44860955 -158224577 + AluSg SINE Alu 1 327 0 1619 159 4 8 chr5 44861480 44861737 -158223795 + AluJo SINE Alu 45 300 -12 2285 90 0 17 chr5 44861760 44862060 -158223472 + AluY SINE Alu 1 295 -16 2283 103 0 7 chr5 44862074 44862375 -158223157 + AluSq SINE Alu 5 303 -10 607 130 0 0 chr5 44862391 44862483 -158223049 + AluSg/x SINE Alu 211 302 -8 936 153 23 34 chr5 44862561 44862737 -158222795 - AluJb SINE Alu -9 303 130 367 176 186 29 chr5 44864249 44864351 -158221181 + MER2 DNA MER2_type 225 342 -3 1785 78 22 19 chr5 44864748 44865018 -158220514 - SVA Other Other -339 1047 777 606 278 0 0 chr5 44865330 44865643 -158219889 + (TGAA)n Simple_repeat Simple_repeat 1 313 0 602 238 4 0 chr5 44865663 44865951 -158219581 + (TGAA)n Simple_repeat Simple_repeat 1 289 0 * 750 211 0 0 chr5 44865918 44866098 -158219434 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 2145 147 0 0 chr5 44866901 44867201 -158218331 - AluSx SINE Alu -12 300 1 466 179 12 0 chr5 44867202 44867286 -158218246 - MIR SINE MIR -115 147 63 210 118 0 0 chr5 44867292 44867326 -158218206 + (A)n Simple_repeat Simple_repeat 1 34 0 2027 148 0 3 chr5 44867337 44867640 -158217892 + AluJb SINE Alu 2 303 -9 2335 81 3 10 chr5 44867640 44867948 -158217584 + AluY SINE Alu 1 306 -5 1068 147 29 0 chr5 44867968 44868138 -158217394 + AluSg/x SINE Alu 135 309 -1 293 253 0 44 chr5 44868145 44868236 -158217296 - MER3 DNA MER1_type -122 87 1 1654 133 68 28 chr5 44868945 44869269 -158216263 + MER44D DNA MER2_type 1 607 -2 937 235 78 0 chr5 44870668 44870885 -158214647 + MIR SINE MIR 29 262 0 293 336 38 53 chr5 44872501 44872632 -158212900 - MER5B DNA MER1_type -49 129 1 213 280 172 21 chr5 44873054 44873147 -158212385 - L2 LINE L2 -2 3311 3205 1728 191 82 48 chr5 44873571 44874048 -158211484 - MLT1D LTR MaLR -7 498 6 574 335 101 38 chr5 44874075 44874600 -158210932 - L2 LINE L2 -528 2786 2229 716 178 115 73 chr5 44874600 44874887 -158210645 + MSTA LTR MaLR 1 299 -129 2192 119 0 0 chr5 44875535 44875829 -158209703 - AluSx SINE Alu -17 295 2 411 237 32 50 chr5 44875850 44876069 -158209463 - L1MC5 LINE L1 -436 7525 7311 195 215 139 25 chr5 44876556 44876635 -158208897 - L2 LINE L2 -165 3148 3061 1176 241 53 16 chr5 44876642 44876965 -158208567 - MLT1C LTR MaLR 0 467 133 194 250 0 0 chr5 44877627 44877667 -158207865 - MIR SINE MIR -129 79 40 515 281 6 121 chr5 44877741 44878072 -158207460 + L3 LINE CR1 1036 1328 -249 396 186 133 0 chr5 44878079 44878192 -158207340 + MLT1C LTR MaLR 6 133 -334 412 332 133 15 chr5 44878291 44878487 -158207045 + MIR SINE MIR 23 241 -21 354 301 113 5 chr5 44878553 44878756 -158206776 + L1ME LINE L1 5594 5818 -344 724 240 143 10 chr5 44879080 44879276 -158206256 - MIR SINE MIR -38 224 3 1470 102 0 0 chr5 44879454 44879640 -158205892 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 44879941 44879996 -158205536 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 44880654 44880704 -158204828 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 44880711 44880742 -158204790 + (CA)n Simple_repeat Simple_repeat 1 31 0 456 268 51 19 chr5 44880812 44880969 -158204563 + MER63A DNA MER1_type 49 210 0 515 343 91 8 chr5 44881169 44881411 -158204121 + MIR SINE MIR 1 262 0 1393 274 44 27 chr5 44881617 44882123 -158203409 + L2 LINE L2 2555 3064 -249 324 216 167 10 chr5 44882123 44882225 -158203307 + MLT1C LTR MaLR 7 124 -343 246 221 21 21 chr5 44882330 44882425 -158203107 + L1MC5 LINE L1 7840 7934 -27 375 78 0 0 chr5 44882451 44882502 -158203030 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 693 174 0 0 chr5 44883410 44883519 -158202013 + AluJb SINE Alu 179 287 -25 318 239 22 43 chr5 44883520 44883612 -158201920 - L1MC4 LINE L1 -1339 6703 6614 2204 121 28 36 chr5 44883616 44883980 -158201552 + THE1B LTR MaLR 4 364 0 198 368 26 26 chr5 44883983 44884100 -158201432 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 44886618 44886681 -158198851 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 44888098 44888131 -158197401 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 44888138 44888188 -158197344 + AT_rich Low_complexity Low_complexity 1 50 0 1494 156 18 127 chr5 44888201 44888586 -158196946 + MER7A DNA MER2_type 1 341 -5 1814 132 3 43 chr5 44888831 44889135 -158196397 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 44889774 44889794 -158195738 + (TA)n Simple_repeat Simple_repeat 2 21 0 1868 155 0 20 chr5 44889863 44890160 -158195372 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 44890161 44890213 -158195319 + (TA)n Simple_repeat Simple_repeat 1 52 0 232 233 47 0 chr5 44890218 44890304 -158195228 - L1MC4 LINE L1 -1339 6703 6614 241 298 0 0 chr5 44890305 44890362 -158195170 + (TA)n Simple_repeat Simple_repeat 2 58 0 313 318 0 0 chr5 44890363 44890451 -158195081 + L1MC4 LINE L1 6615 6702 -1340 322 297 41 41 chr5 44891146 44891291 -158194241 + HAL1 LINE L1 2307 2451 -56 341 316 39 124 chr5 44891591 44891946 -158193586 + L2 LINE L2 2948 3272 0 468 232 83 18 chr5 44892073 44892241 -158193291 + MER104 DNA MER2_type 2 180 0 1239 106 252 0 chr5 44893229 44893485 -158192047 - AluSx SINE Alu 0 313 1 1706 215 65 70 chr5 44893810 44894367 -158191165 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 44894490 44894755 -158190777 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 44895623 44895729 -158189803 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 44895741 44895968 -158189564 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 44896272 44896684 -158188848 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 44896761 44896785 -158188747 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 44896886 44897219 -158188313 - L1MC4a LINE L1 -1962 5846 5534 1502 96 0 19 chr5 44897565 44897773 -158187759 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 44898910 44898999 -158186533 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 44899476 44899609 -158185923 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 44900091 44900411 -158185121 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 44902957 44903368 -158182164 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 44903437 44903754 -158181778 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 44903791 44904051 -158181481 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 44904056 44904528 -158181004 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 44904657 44904746 -158180786 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 44905165 44905212 -158180320 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 44905415 44905649 -158179883 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 44906190 44906423 -158179109 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 44907129 44907176 -158178356 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 44907203 44907236 -158178296 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 44907379 44907524 -158178008 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 44908400 44908621 -158176911 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 44908621 44908753 -158176779 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 44909033 44909329 -158176203 + AluSc SINE Alu 1 295 -14 1961 138 13 3 chr5 44910163 44910467 -158175065 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 44910577 44910676 -158174856 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 44910713 44910901 -158174631 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 44911036 44911070 -158174462 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 44911398 44911526 -158174006 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 44911747 44911851 -158173681 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 44911969 44912043 -158173489 - MIR SINE MIR -110 98 20 248 297 42 59 chr5 44912403 44912521 -158173011 - MIR3 SINE MIR -11 197 82 510 275 14 0 chr5 44912626 44912768 -158172764 - MIR SINE MIR -111 151 8 408 321 11 60 chr5 44912892 44913157 -158172375 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 44913757 44914590 -158170942 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 44915132 44915162 -158170370 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 44916221 44916323 -158169209 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 44916340 44916506 -158169026 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 44917770 44918089 -158167443 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 44918276 44918321 -158167211 - L2 LINE L2 0 3313 3269 425 341 90 14 chr5 44919053 44919264 -158166268 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 44919854 44920674 -158164858 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 44920939 44921034 -158164498 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 44921285 44921463 -158164069 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 44922914 44922959 -158162573 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 44922959 44923008 -158162524 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 44923811 44923863 -158161669 + (TA)n Simple_repeat Simple_repeat 2 53 0 943 260 71 57 chr5 44924936 44925608 -158159924 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 44925608 44925639 -158159893 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 44925641 44925708 -158159824 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 44926462 44926769 -158158763 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 44927685 44927750 -158157782 + AluS SINE Alu 224 286 -23 36 0 0 0 chr5 44927750 44927786 -158157746 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 44928158 44928369 -158157163 - MIR SINE MIR -39 223 22 217 191 27 64 chr5 44928416 44928526 -158157006 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 44931096 44931313 -158154219 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 44932175 44932197 -158153335 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 44932882 44932936 -158152596 + L2 LINE L2 3214 3271 -1 189 0 0 0 chr5 44933004 44933025 -158152507 + (T)n Simple_repeat Simple_repeat 1 21 0 459 301 63 0 chr5 44933268 44933411 -158152121 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 44933600 44933674 -158151858 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 44933708 44933736 -158151796 + AT_rich Low_complexity Low_complexity 1 28 0 221 134 62 27 chr5 44933741 44933853 -158151679 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 363 110 68 49 chr5 44933865 44934028 -158151504 + (TATAA)n Simple_repeat Simple_repeat 4 169 0 213 125 14 42 chr5 44934074 44934146 -158151386 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 21 0 0 0 chr5 44934146 44934167 -158151365 + AT_rich Low_complexity Low_complexity 1 21 0 219 125 78 0 chr5 44934168 44934232 -158151300 + (TA)n Simple_repeat Simple_repeat 1 69 0 277 107 36 24 chr5 44934273 44934357 -158151175 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 4153 229 25 37 chr5 44934364 44935331 -158150201 + L1ME LINE L1 96 1050 -5809 * 7961 230 51 22 chr5 44935321 44937790 -158147742 + L1ME LINE L1 3477 6016 -941 390 325 36 0 chr5 44937933 44938127 -158147405 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 44938767 44938796 -158146736 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 44939670 44939854 -158145678 - MER5A DNA MER1_type -3 186 2 2015 122 3 3 chr5 44941119 44941448 -158144084 + AluSq SINE Alu 1 329 0 519 230 96 86 chr5 44941479 44941580 -158143952 + MIR SINE MIR 52 151 -111 2335 98 3 0 chr5 44941580 44941885 -158143647 - AluSx SINE Alu -6 306 1 519 230 96 86 chr5 44941885 44941992 -158143540 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 44942015 44942135 -158143397 + L2 LINE L2 3150 3272 0 945 194 46 21 chr5 44942277 44942514 -158143018 + LTR23 LTR ERV1 161 403 -34 402 300 15 8 chr5 44942971 44943101 -158142431 + MIR SINE MIR 31 161 -101 1744 184 3 10 chr5 44944236 44944546 -158140986 + AluJo SINE Alu 1 308 -4 1142 65 5 32 chr5 44944600 44944620 -158140912 + (TTTC)n Simple_repeat Simple_repeat 1 199 0 1142 65 5 32 chr5 44944620 44944805 -158140727 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1849 173 0 19 chr5 44944867 44945180 -158140352 - AluJb SINE Alu -1 311 5 288 340 100 0 chr5 44945224 44945324 -158140208 + L2 LINE L2 3163 3272 0 1085 288 32 37 chr5 44945375 44945750 -158139782 + LTR16B LTR ERVL 2 374 -90 23 0 0 0 chr5 44947000 44947023 -158138509 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr5 44947153 44947185 -158138347 + (TG)n Simple_repeat Simple_repeat 2 33 0 233 286 29 43 chr5 44947763 44947833 -158137699 + MER5A DNA MER1_type 51 119 -70 212 321 25 12 chr5 44948317 44948398 -158137134 + MIR3 SINE MIR 121 202 -6 2099 197 17 38 chr5 44949262 44949739 -158135793 - MLT1C LTR MaLR 0 467 1 1845 126 51 27 chr5 44949752 44950045 -158135487 - AluJb SINE Alu -12 300 1 188 349 36 36 chr5 44950729 44950812 -158134720 - L2 LINE L2 -2 3270 3188 188 307 34 91 chr5 44952370 44952458 -158133074 - L2 LINE L2 -89 3183 3101 237 338 150 8 chr5 44952460 44952593 -158132939 + MIR3 SINE MIR 9 160 -48 412 175 0 0 chr5 44952627 44952707 -158132825 - MER113 DNA MER1_type? -50 471 392 234 244 32 16 chr5 44952859 44952982 -158132550 - MER113 DNA MER1_type? -393 128 4 305 253 48 0 chr5 44955181 44955264 -158130268 + MIR SINE MIR 106 192 -70 2652 113 0 0 chr5 44955377 44955741 -158129791 - THE1B LTR MaLR 0 364 1 1561 71 9 0 chr5 44956130 44956340 -158129192 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 44956702 44956754 -158128778 + L2 LINE L2 3221 3272 0 358 270 11 0 chr5 44957770 44957859 -158127673 - MER81 DNA DNA -24 90 1 534 236 176 7 chr5 44957876 44958024 -158127508 - MER5A DNA MER1_type -13 176 4 * 707 273 123 0 chr5 44958024 44958244 -158127288 + MIR SINE MIR 15 262 0 446 253 121 18 chr5 44958692 44958858 -158126674 + MIR SINE MIR 80 262 0 185 344 57 38 chr5 44959574 44959731 -158125801 + MIR SINE MIR 99 258 -4 614 254 68 6 chr5 44960206 44960383 -158125149 - MIR SINE MIR -65 197 10 286 358 73 28 chr5 44960807 44960986 -158124546 + MIR3 SINE MIR 19 205 -3 2112 143 0 0 chr5 44961590 44961890 -158123642 - AluSx SINE Alu -12 300 1 227 311 100 65 chr5 44961938 44962337 -158123195 + L2 LINE L2 2829 3241 -72 194 293 57 52 chr5 44962454 44962597 -158122935 - MIR SINE MIR -64 144 25 210 310 60 10 chr5 44963025 44963125 -158122407 - MER5A DNA MER1_type -5 184 80 * 319 279 53 17 chr5 44963044 44963185 -158122347 + MER5A DNA MER1_type 29 178 0 225 211 0 0 chr5 44963342 44963394 -158122138 + (TATG)n Simple_repeat Simple_repeat 3 54 0 389 129 14 0 chr5 44963494 44963564 -158121968 + (TA)n Simple_repeat Simple_repeat 2 72 0 27 81 0 0 chr5 44964566 44964628 -158120904 + AT_rich Low_complexity Low_complexity 1 62 0 35 24 0 0 chr5 44964653 44964695 -158120837 + AT_rich Low_complexity Low_complexity 1 42 0 6197 93 16 0 chr5 44966119 44967206 -158118326 - L1PA13 LINE L1 -7 6156 5083 677 229 46 102 chr5 44967754 44968125 -158117407 + LTR16A1 LTR ERVL 108 457 0 575 235 71 46 chr5 44968405 44968728 -158116804 - L1ME4a LINE L1 -16 6105 5775 2064 131 0 22 chr5 44970771 44971083 -158114449 - AluSx SINE Alu -7 305 1 1783 128 109 0 chr5 44971593 44971858 -158113674 + AluSg SINE Alu 1 294 -16 2252 88 3 7 chr5 44973242 44973536 -158111996 + AluSq SINE Alu 1 293 -20 370 299 0 0 chr5 44973543 44973640 -158111892 + L1MC4 LINE L1 6614 6710 -1332 318 241 141 55 chr5 44974167 44974457 -158111075 + Charlie4a DNA MER1_type 193 507 -1 432 263 42 0 chr5 44975948 44976043 -158109489 + L2 LINE L2 3168 3266 -6 458 342 107 16 chr5 44976230 44976540 -158108992 + L3 LINE CR1 699 1036 -541 704 302 112 65 chr5 44976629 44977347 -158108185 - L2 LINE L2 -15 3298 2311 803 149 0 0 chr5 44978023 44978164 -158107368 + L1MA5 LINE L1 6159 6299 -1 2168 121 0 7 chr5 44978639 44978937 -158106595 - AluSg SINE Alu -14 296 1 405 304 32 19 chr5 44980710 44980868 -158104664 - MIR SINE MIR -15 247 88 2101 114 27 23 chr5 44981603 44981902 -158103630 + AluSg SINE Alu 1 300 -10 309 275 288 0 chr5 44982235 44982395 -158103137 - MIR SINE MIR -46 216 11 381 285 73 67 chr5 44982776 44982955 -158102577 - MIR SINE MIR -57 205 26 678 313 83 44 chr5 44983126 44983612 -158101920 - L2 LINE L2 -845 2469 1956 1641 164 38 3 chr5 44983612 44983899 -158101633 + AluJo SINE Alu 1 297 -15 678 313 83 44 chr5 44983899 44983977 -158101555 - L2 LINE L2 -1358 1956 1883 1088 314 30 10 chr5 44984166 44984570 -158100962 - L2 LINE L2 -390 2924 2513 399 300 111 0 chr5 44984662 44984842 -158100690 - L2 LINE L2 -1577 1737 1538 1350 87 0 0 chr5 44984989 44985161 -158100371 - AluSq SINE Alu -6 307 136 1224 158 48 5 chr5 44985159 44985368 -158100164 - AluJb SINE Alu -94 218 1 * 198 294 39 39 chr5 44985383 44985485 -158100047 + L2 LINE L2 1966 2067 -1247 324 70 0 0 chr5 44985518 44985561 -158099971 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 0 0 0 chr5 44985560 44985585 -158099947 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1068 92 0 0 chr5 44985618 44985749 -158099783 - AluSq SINE Alu -182 131 1 1483 62 0 0 chr5 44986091 44986270 -158099262 - AluY SINE Alu -3 308 130 405 330 58 6 chr5 44986501 44986674 -158098858 + L3 LINE CR1 1281 1462 -115 335 313 126 42 chr5 44986695 44986909 -158098623 - MIR SINE MIR -30 232 1 315 333 121 34 chr5 44988285 44988780 -158096752 + L2 LINE L2 1932 2469 -845 2200 123 7 0 chr5 44991363 44991663 -158093869 + AluSx SINE Alu 1 302 -10 533 266 79 86 chr5 44994864 44995168 -158090364 + MLT1I LTR MaLR 82 383 -26 1042 279 77 25 chr5 44995591 44995956 -158089576 - LTR16B LTR ERVL -45 419 36 640 257 7 7 chr5 44995966 44996114 -158089418 - MIR SINE MIR -59 203 56 2295 110 0 0 chr5 44996632 44996924 -158088608 + AluSc SINE Alu 1 292 -17 351 0 0 0 chr5 44997043 44997082 -158088450 + (CA)n Simple_repeat Simple_repeat 1 39 0 523 289 34 0 chr5 44997097 44997246 -158088286 + LTR16B LTR ERVL 153 306 -158 5262 22 3 0 chr5 44997773 44998466 -158087066 - L1P1 LINE L1 -723 5432 4739 4107 44 0 0 chr5 44998466 44998965 -158086567 + L1PA4 LINE L1 5653 6152 -3 2081 124 0 7 chr5 45000125 45000424 -158085108 - AluSx SINE Alu -15 297 1 544 166 40 73 chr5 45000982 45001133 -158084399 + FRAM SINE Alu 1 146 -30 1860 117 21 7 chr5 45001651 45001933 -158083599 - AluSx SINE Alu -16 296 11 190 173 19 77 chr5 45002925 45002977 -158082555 + L2 LINE L2 3214 3262 -10 404 294 190 5 chr5 45003253 45003437 -158082095 + MIR SINE MIR 1 218 -44 35 54 0 0 chr5 45003441 45003497 -158082035 + AT_rich Low_complexity Low_complexity 1 56 0 303 291 189 8 chr5 45003542 45003669 -158081863 + MIR SINE MIR 2 151 -111 239 178 219 0 chr5 45003715 45003788 -158081744 - LTR33 LTR ERVL -9 512 424 308 263 17 42 chr5 45003923 45004041 -158081491 - LTR33 LTR ERVL -405 116 2 224 200 73 0 chr5 45004042 45004097 -158081435 + MIR SINE MIR 204 262 0 2089 271 52 54 chr5 45004457 45005605 -158079927 + L2 LINE L2 2109 3266 -47 251 299 37 0 chr5 45006283 45006390 -158079142 + MER103 DNA DNA 3 113 -53 246 221 13 65 chr5 45006495 45006572 -158078960 - MIR SINE MIR -73 189 117 1331 208 44 28 chr5 45006691 45007078 -158078454 - MLT1C LTR MaLR -12 378 9 421 328 89 32 chr5 45007613 45007718 -158077814 + MIR SINE MIR 2 100 -162 1976 128 7 0 chr5 45007718 45008000 -158077532 + AluSq SINE Alu 29 312 -1 421 328 89 32 chr5 45008000 45008141 -158077391 + MIR SINE MIR 100 262 0 377 200 0 48 chr5 45008950 45009075 -158076457 + MER113 DNA MER1_type? 65 183 -338 396 273 147 0 chr5 45009350 45009500 -158076032 + MLT1I LTR MaLR 232 403 -6 392 269 55 28 chr5 45009905 45010050 -158075482 - MIR SINE MIR -2 260 112 2256 93 22 29 chr5 45010079 45010391 -158075141 + AluSg SINE Alu 1 310 0 429 347 20 0 chr5 45011334 45011484 -158074048 + MER91A DNA MER1_type 1 153 -43 180 0 0 0 chr5 45011502 45011522 -158074010 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 1504 80 5 0 chr5 45011555 45011754 -158073778 - L1PA8 LINE L1 0 6172 5973 385 85 0 0 chr5 45011755 45011814 -158073718 + L1PA8 LINE L1 5894 5952 -179 523 300 21 52 chr5 45012156 45012483 -158073049 + MLT1K LTR MaLR 247 563 -25 480 213 0 0 chr5 45012731 45012853 -158072679 + (TA)n Simple_repeat Simple_repeat 2 123 0 301 306 85 76 chr5 45013362 45013611 -158071921 + L2 LINE L2 2732 2980 -292 185 35 69 0 chr5 45013742 45013771 -158071761 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 715 270 119 4 chr5 45013856 45014082 -158071450 + MIR SINE MIR 11 262 0 207 114 0 0 chr5 45015348 45015383 -158070149 + (TC)n Simple_repeat Simple_repeat 2 36 0 310 321 73 34 chr5 45018158 45018635 -158066897 + HAL1 LINE L1 1224 1719 -788 2006 220 51 64 chr5 45018956 45019531 -158066001 + L1ME1 LINE L1 1159 1740 -4800 1844 74 0 4 chr5 45019531 45019762 -158065770 + AluY SINE Alu 1 230 -81 2006 220 51 64 chr5 45019762 45019778 -158065754 + L1ME1 LINE L1 1740 1755 -4785 243 61 0 0 chr5 45019778 45019811 -158065721 + (CA)n Simple_repeat Simple_repeat 2 34 0 2006 220 51 64 chr5 45019811 45019999 -158065533 + L1ME1 LINE L1 1755 1929 -4611 * 4194 254 108 22 chr5 45019986 45020410 -158065122 + L1ME1 LINE L1 3533 3919 -2621 2621 52 0 3 chr5 45020410 45020720 -158064812 - AluY SINE Alu -2 309 1 4194 254 108 22 chr5 45020720 45021506 -158064026 + L1ME1 LINE L1 3919 4635 -1905 2499 55 3 3 chr5 45021506 45021814 -158063718 + AluY SINE Alu 1 308 -3 4194 254 108 22 chr5 45021814 45022686 -158062846 + L1ME1 LINE L1 4635 5797 -743 1736 225 116 58 chr5 45022692 45023362 -158062170 + L1ME1 LINE L1 5849 6557 -3 576 287 130 4 chr5 45023483 45023713 -158061819 - MIR SINE MIR -2 260 2 243 103 0 0 chr5 45024320 45024359 -158061173 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 520 148 19 0 chr5 45024496 45024604 -158060928 - L1MB1 LINE L1 0 6168 6059 2257 96 0 3 chr5 45025456 45025748 -158059784 - AluSc SINE Alu -18 291 1 1977 114 0 0 chr5 45027084 45027356 -158058176 - AluSg SINE Alu -3 307 36 654 271 83 29 chr5 45027434 45027784 -158057748 + MLT1L LTR MaLR 3 371 -244 369 239 161 15 chr5 45027828 45027958 -158057574 + MLT1L LTR MaLR 463 611 -4 545 30 0 0 chr5 45028736 45028803 -158056729 - L1PA5 LINE L1 -6 6148 6082 454 284 47 42 chr5 45030586 45030815 -158054717 + MIR SINE MIR 19 247 -15 453 61 0 184 chr5 45031006 45031104 -158054428 - MADE1 DNA Mariner 0 80 1 3300 180 23 73 chr5 45031292 45032118 -158053414 + LTR1 LTR ERV1 1 785 0 360 299 31 8 chr5 45032147 45032274 -158053258 - MIR SINE MIR 0 262 133 359 265 106 44 chr5 45033825 45034083 -158051449 - MER110A LTR ERV1 0 468 229 425 310 55 7 chr5 45035202 45035347 -158050185 + MIR SINE MIR 83 234 -28 25 75 0 0 chr5 45035365 45035418 -158050114 + AT_rich Low_complexity Low_complexity 1 53 0 24 77 0 0 chr5 45037038 45037090 -158048442 + AT_rich Low_complexity Low_complexity 1 52 0 586 283 35 0 chr5 45037143 45037316 -158048216 + MIR SINE MIR 54 232 -30 251 149 43 0 chr5 45037326 45037373 -158048159 - MIR SINE MIR -31 231 183 30 0 0 0 chr5 45037373 45037403 -158048129 + AT_rich Low_complexity Low_complexity 1 30 0 2080 112 0 0 chr5 45037422 45037699 -158047833 - AluSq SINE Alu 0 313 37 495 0 0 0 chr5 45037746 45037801 -158047731 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 248 0 31 0 chr5 45037805 45037837 -158047695 + (GA)n Simple_repeat Simple_repeat 2 34 0 6518 159 23 26 chr5 45038394 45044654 -158040878 - L1PA10 LINE L1 0 6483 4 457 310 182 5 chr5 45044866 45045069 -158040463 - MIR SINE MIR -9 253 15 519 281 39 39 chr5 45045402 45045580 -158039952 + MER5A DNA MER1_type 12 189 0 363 287 93 20 chr5 45045595 45045745 -158039787 + MER5B DNA MER1_type 8 168 -10 334 290 95 9 chr5 45046011 45046242 -158039290 - L1ME4a LINE L1 -96 6025 5775 2086 98 0 64 chr5 45046425 45046601 -158038931 - AluSg1 SINE Alu -2 307 160 2309 71 3 0 chr5 45046601 45046897 -158038635 - AluY SINE Alu -14 297 1 2086 98 0 64 chr5 45046897 45047048 -158038484 - AluSg1 SINE Alu -149 160 1 2102 126 3 7 chr5 45047343 45047636 -158037896 - AluSx SINE Alu -15 297 6 418 292 59 42 chr5 45047673 45047909 -158037623 - L1ME4a LINE L1 -869 5277 5038 221 246 0 0 chr5 45048152 45048209 -158037323 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 1789 174 112 45 chr5 45048226 45048698 -158036834 - MLT1D LTR MaLR -1 504 1 40 0 0 0 chr5 45048773 45048813 -158036719 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 45049569 45049591 -158035941 + AT_rich Low_complexity Low_complexity 1 22 0 2430 186 12 47 chr5 45049725 45050350 -158035182 - L1MC1 LINE L1 0 6333 5776 1481 194 150 9 chr5 45050350 45050696 -158034836 - MSTD LTR MaLR -1 395 1 2430 186 12 47 chr5 45050696 45051279 -158034253 - L1MC1 LINE L1 -557 5776 5175 344 277 94 35 chr5 45052378 45052580 -158032952 + ERVL LTR ERVL 1926 2139 -3625 2127 98 18 0 chr5 45052852 45053138 -158032394 + AluSp SINE Alu 13 303 -10 399 252 84 7 chr5 45053155 45053298 -158032234 - MIR SINE MIR -56 206 53 186 263 85 51 chr5 45053361 45053386 -158032146 - L2 LINE L2 -1879 1435 1412 189 0 0 0 chr5 45053386 45053407 -158032125 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 186 263 85 51 chr5 45053407 45053499 -158032033 - L2 LINE L2 -1902 1412 1314 490 306 28 22 chr5 45053519 45053636 -158031896 + MER5A DNA MER1_type 9 129 -60 2169 68 26 0 chr5 45053636 45053902 -158031630 - AluY SINE Alu -14 297 25 490 306 28 22 chr5 45053902 45053964 -158031568 + MER5A DNA MER1_type 129 189 0 410 307 59 12 chr5 45054120 45054450 -158031082 + MLT1L LTR MaLR 202 607 -8 180 357 152 34 chr5 45054639 45054967 -158030565 - L2 LINE L2 -2281 1033 667 307 324 81 49 chr5 45055028 45055213 -158030319 - L2 LINE L2 -216 3056 2866 2237 56 0 28 chr5 45055345 45055629 -158029903 - AluY SINE Alu 0 311 36 694 127 43 0 chr5 45055673 45055885 -158029647 + CT-rich Low_complexity Low_complexity 1 221 0 811 168 6 6 chr5 45056068 45056145 -158029387 + CT-rich Low_complexity Low_complexity 3 79 -96 2022 127 10 7 chr5 45056145 45056452 -158029080 - AluSx SINE Alu -4 308 1 811 168 6 6 chr5 45056452 45056500 -158029032 + CT-rich Low_complexity Low_complexity 79 126 -49 2251 88 3 16 chr5 45056500 45056805 -158028727 - AluY SINE Alu -6 305 5 811 168 6 6 chr5 45056805 45056851 -158028681 + CT-rich Low_complexity Low_complexity 125 175 0 304 146 0 0 chr5 45056851 45056899 -158028633 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 400 208 13 0 chr5 45057458 45057535 -158027997 + MER67A LTR ERV1 11 88 -455 819 233 112 75 chr5 45057655 45058035 -158027497 + MER67B LTR ERV1 83 350 -335 2369 107 0 0 chr5 45058035 45058344 -158027188 + AluSg1 SINE Alu 1 309 0 819 233 112 75 chr5 45058344 45058400 -158027132 + MER67B LTR ERV1 350 403 -282 * 915 244 19 26 chr5 45058369 45058640 -158026892 + MER67A LTR ERV1 275 543 0 2268 92 0 7 chr5 45060977 45061281 -158024251 - AluSx SINE Alu -10 302 1 244 206 95 0 chr5 45061294 45061357 -158024175 + MIR3 SINE MIR 137 205 -3 2051 130 7 3 chr5 45061756 45062055 -158023477 - AluSq SINE Alu -13 300 1 315 293 14 71 chr5 45062334 45062631 -158022901 - MER97c DNA MER1_type? -42 1048 769 24 0 0 0 chr5 45062781 45062805 -158022727 + AT_rich Low_complexity Low_complexity 1 24 0 2073 113 7 3 chr5 45062817 45063109 -158022423 + AluSg SINE Alu 12 304 -6 790 153 39 74 chr5 45063157 45063347 -158022185 - L1MC3 LINE L1 -11 7774 7592 2263 81 3 13 chr5 45063347 45063657 -158021875 - AluY SINE Alu -4 307 1 790 153 39 74 chr5 45063657 45063695 -158021837 - L1MC3 LINE L1 -193 7592 7554 286 150 9 168 chr5 45063837 45063950 -158021582 + MER97c DNA MER1_type? 454 548 -542 929 211 76 40 chr5 45063950 45064253 -158021279 - MER97b DNA MER1_type? -657 396 83 2061 109 29 0 chr5 45064263 45064576 -158020956 - L1PB2 LINE L1 -2 6149 5828 1155 188 0 0 chr5 45064649 45064856 -158020676 + MER52A LTR ERV1 1278 1484 -271 2532 104 60 52 chr5 45064859 45064937 -158020595 - L1PB2 LINE L1 -312 5839 5763 2158 108 3 43 chr5 45064937 45065261 -158020271 - AluSx SINE Alu -1 311 1 2532 104 60 52 chr5 45065261 45065662 -158019870 - L1PB2 LINE L1 -388 5763 5356 5912 181 156 55 chr5 45066059 45067648 -158017884 - MER52A LTR ERV1 0 1755 7 2084 150 7 3 chr5 45068663 45068970 -158016562 - AluSx SINE Alu -2 310 3 268 298 36 0 chr5 45069253 45069337 -158016195 - MIR SINE MIR -112 150 64 955 292 121 15 chr5 45069542 45070044 -158015488 + MLT1G1 LTR MaLR 24 582 -13 405 287 15 55 chr5 45070957 45071074 -158014458 - LTR16C LTR ERVL -18 473 366 2159 135 30 28 chr5 45071074 45071436 -158014096 - THE1B LTR MaLR -1 363 1 405 287 15 55 chr5 45071436 45071520 -158014012 - LTR16C LTR ERVL -125 366 280 26 0 0 0 chr5 45072002 45072028 -158013504 + AT_rich Low_complexity Low_complexity 1 26 0 2470 54 0 17 chr5 45072099 45072396 -158013136 + AluY SINE Alu 3 294 -17 705 265 85 13 chr5 45072643 45072949 -158012583 - MER45B DNA AcHobo 0 1040 713 512 285 4 32 chr5 45073019 45073257 -158012275 - MER45C DNA AcHobo -178 775 495 315 65 0 0 chr5 45073276 45073322 -158012210 - MADE1 DNA Mariner 0 80 35 681 343 120 9 chr5 45073635 45074067 -158011465 + L3 LINE CR1 1008 1487 -90 1620 216 120 2 chr5 45074213 45074629 -158010903 - MLT1C LTR MaLR 0 467 3 236 370 10 0 chr5 45074656 45074756 -158010776 + MIR SINE MIR 47 147 -61 210 37 0 0 chr5 45075089 45075116 -158010416 + (CA)n Simple_repeat Simple_repeat 2 28 0 2557 206 29 32 chr5 45075439 45075859 -158009673 + L1MB8 LINE L1 4666 5086 -1098 240 35 0 0 chr5 45075859 45075888 -158009644 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2557 206 29 32 chr5 45075888 45075900 -158009632 + L1MB8 LINE L1 5086 5097 -1087 2356 158 36 32 chr5 45075900 45076405 -158009127 - L1MA7 LINE L1 -3 6288 5782 2557 206 29 32 chr5 45076405 45076882 -158008650 + L1MB8 LINE L1 5097 5569 -615 2382 90 0 3 chr5 45076882 45077182 -158008350 + AluSc SINE Alu 1 299 -10 2557 206 29 32 chr5 45077182 45077442 -158008090 + L1MB8 LINE L1 5569 5828 -356 899 199 0 6 chr5 45077444 45077605 -158007927 - MER8 DNA MER2_type -1 238 79 1795 183 0 19 chr5 45077643 45078009 -158007523 + L1MB8 LINE L1 5818 6176 -2 208 350 72 0 chr5 45078075 45078172 -158007360 - L2 LINE L2 -236 3036 2933 480 207 95 99 chr5 45078199 45078421 -158007111 + MLT1E1 LTR MaLR 1 221 -433 244 284 0 0 chr5 45079249 45079330 -158006202 + T-rich Low_complexity Low_complexity 1 81 0 3298 179 82 10 chr5 45079341 45080024 -158005508 - MER44D DNA MER2_type 0 605 2 1610 164 124 13 chr5 45080520 45080941 -158004591 + MLT2B2 LTR ERVL 1 515 0 30 0 0 0 chr5 45081028 45081058 -158004474 + AT_rich Low_complexity Low_complexity 1 30 0 321 276 52 30 chr5 45082837 45082971 -158002561 + MIR SINE MIR 33 169 -93 213 333 46 35 chr5 45082960 45083047 -158002485 + L2 LINE L2 3146 3233 -39 * 26 64 0 0 chr5 45083107 45083154 -158002378 + AT_rich Low_complexity Low_complexity 1 47 0 1305 118 35 0 chr5 45083258 45083461 -158002071 + MER2 DNA MER2_type 1 210 -135 200 259 19 37 chr5 45084604 45084658 -158000874 + L3 LINE CR1 1514 1566 -11 1055 252 5 0 chr5 45084663 45084885 -158000647 - MER58A DNA MER1_type -1 223 1 25 0 0 0 chr5 45085061 45085086 -158000446 + AT_rich Low_complexity Low_complexity 1 25 0 1127 303 24 0 chr5 45085305 45085678 -157999854 + MLT1J LTR MaLR 1 382 -129 228 275 125 25 chr5 45086369 45086449 -157999083 - L2 LINE L2 -1 3271 3184 257 324 0 0 chr5 45086566 45086634 -157998898 + MER110-int LTR ERV1 3810 3877 -2924 747 322 31 44 chr5 45086722 45087306 -157998226 + MER110-int LTR ERV1 2102 2692 -4845 434 34 34 0 chr5 45087306 45087365 -157998167 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 747 322 31 44 chr5 45087365 45088112 -157997420 + MER110-int LTR ERV1 2692 6137 -1400 1824 129 0 66 chr5 45088197 45088534 -157996998 + AluSq SINE Alu 1 317 0 3148 149 19 0 chr5 45089132 45089662 -157995870 - L1PA16 LINE L1 0 6166 5627 1170 148 10 1 chr5 45089662 45089903 -157995629 + L1 LINE L1 5177 5420 -743 1471 165 22 41 chr5 45090001 45090316 -157995216 + MER39 LTR ERV1 395 703 -4 353 247 0 10 chr5 45090341 45090438 -157995094 + MER57A LTR ERV1 302 397 -6 203 371 57 44 chr5 45090526 45090774 -157994758 + L2 LINE L2 2804 3054 -218 1617 154 65 31 chr5 45091622 45091973 -157993559 + THE1C LTR MaLR 1 363 -12 470 349 89 7 chr5 45092028 45092297 -157993235 - L2 LINE L2 -362 2952 2662 255 214 51 20 chr5 45092438 45092536 -157992996 + (TAAAG)n Simple_repeat Simple_repeat 3 103 0 528 301 89 37 chr5 45093320 45093566 -157991966 - MIR SINE MIR -1 261 3 2066 130 3 3 chr5 45094194 45094486 -157991046 - AluSg SINE Alu -18 292 1 2261 110 0 10 chr5 45094616 45094926 -157990606 - AluSx SINE Alu -5 307 1 291 378 28 7 chr5 45095078 45095221 -157990311 + MIR3 SINE MIR 32 177 -31 364 348 22 0 chr5 45095918 45096056 -157989476 - MIR SINE MIR -65 197 57 1173 176 100 25 chr5 45096916 45097155 -157988377 - AluJo SINE Alu -55 257 1 5635 81 0 116 chr5 45097558 45098492 -157987040 - LTR12 LTR ERV1 0 826 1 1692 100 0 8 chr5 45098618 45098868 -157986664 - HUERS-P3b LTR ERV1 -2458 4960 4713 783 73 0 0 chr5 45098859 45098955 -157986577 - HUERS-P3b LTR ERV1 -3544 3874 3779 * 5331 65 24 1 chr5 45098955 45099755 -157985777 + HUERS-P3 LTR ERV1 4928 5822 -1596 1340 91 5 16 chr5 45099754 45099940 -157985592 + HUERS-P3 LTR ERV1 5961 6144 -1274 * 1357 145 10 0 chr5 45099933 45100140 -157985392 + HUERS-P3 LTR ERV1 8710 8918 -1 2426 137 46 14 chr5 45100140 45100655 -157984877 + LTR9B LTR ERV1 1 560 -84 237 151 0 0 chr5 45100655 45100708 -157984824 + A-rich Low_complexity Low_complexity 1 53 0 541 317 28 0 chr5 45101872 45102014 -157983518 - L2 LINE L2 0 3313 3168 22 56 0 0 chr5 45103187 45103223 -157982309 + AT_rich Low_complexity Low_complexity 1 36 0 4141 190 41 31 chr5 45103446 45103940 -157981592 + L1MB2 LINE L1 4981 5468 -703 188 33 0 33 chr5 45103940 45103970 -157981562 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4141 190 41 31 chr5 45103970 45104314 -157981218 + L1MB2 LINE L1 5468 5807 -364 2196 109 0 0 chr5 45104314 45104632 -157980900 + AluSq SINE Alu 1 318 0 4141 190 41 31 chr5 45104632 45104965 -157980567 + L1MB2 LINE L1 5807 6168 -3 23 0 0 0 chr5 45105602 45105625 -157979907 + AT_rich Low_complexity Low_complexity 1 23 0 1593 196 61 61 chr5 45106086 45106546 -157978986 + MER31B LTR ERV1 1 460 -6 2432 147 57 2 chr5 45106554 45106959 -157978573 - LOR1b LTR ERV1 0 461 29 213 39 0 0 chr5 45106959 45106985 -157978547 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2432 147 57 2 chr5 45106985 45107016 -157978516 - LOR1b LTR ERV1 -432 29 1 1484 229 10 3 chr5 45107430 45107727 -157977805 - AluJo SINE Alu -3 299 1 982 244 30 0 chr5 45107744 45107945 -157977587 + MER58A DNA MER1_type 4 210 -14 1349 210 271 39 chr5 45109284 45109529 -157976003 + MER52A LTR ERV1 3 190 -1565 1730 123 19 8 chr5 45109529 45109789 -157975743 + AluSq SINE Alu 43 305 -8 1349 210 271 39 chr5 45109789 45110009 -157975523 + MER52A LTR ERV1 190 1231 -524 476 188 54 120 chr5 45110082 45110363 -157975169 + LTR28 LTR ERV1 532 716 -304 * 1669 232 51 62 chr5 45110343 45110890 -157974642 + MER52A LTR ERV1 1213 1753 -2 217 254 17 0 chr5 45110940 45110999 -157974533 + A-rich Low_complexity Low_complexity 4 63 0 617 224 88 65 chr5 45111144 45111437 -157974095 - Charlie7 DNA MER1_type -388 2224 1925 1194 217 278 15 chr5 45111437 45111484 -157974048 - MLT2B1 LTR ERVL -2 518 485 1984 146 18 15 chr5 45111484 45111827 -157973705 + MER2 DNA MER2_type 1 344 0 1194 217 278 15 chr5 45111827 45112072 -157973460 - MLT2B1 LTR ERVL -35 485 306 2834 13 0 6 chr5 45112072 45112389 -157973143 + AluYb8 SINE Alu 1 315 -3 1194 217 278 15 chr5 45112389 45112505 -157973027 - MLT2B1 LTR ERVL -214 306 1 622 286 18 9 chr5 45112522 45112742 -157972790 - Charlie7 DNA MER1_type -706 1906 1685 335 113 0 50 chr5 45112847 45112927 -157972605 + (TA)n Simple_repeat Simple_repeat 1 76 0 500 236 81 47 chr5 45112927 45113284 -157972248 - Charlie7 DNA MER1_type -2168 444 8 204 300 0 43 chr5 45113338 45113408 -157972124 + MER5A DNA MER1_type 59 125 -64 1074 265 48 19 chr5 45114082 45114391 -157971141 + MLT1J2 LTR MaLR 3 320 -130 449 248 38 0 chr5 45114896 45115029 -157970503 - L1MC4 LINE L1 -400 7642 7505 295 191 234 7 chr5 45115152 45115293 -157970239 - L1ME4a LINE L1 -153 5968 5796 2043 94 7 10 chr5 45115293 45115592 -157969940 - L1PB1 LINE L1 -1 6150 5853 394 302 102 25 chr5 45117616 45117927 -157967605 - MLT1J LTR MaLR -130 381 1 363 343 65 12 chr5 45117945 45118114 -157967418 + MIR SINE MIR 82 259 -3 1607 303 70 20 chr5 45118564 45119162 -157966370 - MLT2E LTR ERVL 0 628 1 24 53 0 0 chr5 45119239 45119277 -157966255 + AT_rich Low_complexity Low_complexity 1 38 0 726 272 72 79 chr5 45119297 45119768 -157965764 + LTR37B LTR ERV1 1 468 0 884 210 119 18 chr5 45120353 45120572 -157964960 - MLT1D LTR MaLR -264 241 1 228 198 21 19 chr5 45121097 45121160 -157964372 + MIR SINE MIR 92 144 -64 21 0 0 0 chr5 45121787 45121808 -157963724 + AT_rich Low_complexity Low_complexity 1 21 0 486 335 35 13 chr5 45122411 45122641 -157962891 + MER110 LTR ERV1 257 491 0 1929 113 88 0 chr5 45122864 45123147 -157962385 - AluSq SINE Alu -1 312 5 1889 156 3 10 chr5 45123162 45123476 -157962056 - AluJb SINE Alu 0 312 1 303 293 32 49 chr5 45123488 45123611 -157961921 - MIR SINE MIR -110 152 32 312 111 0 0 chr5 45124281 45124335 -157961197 + (GA)n Simple_repeat Simple_repeat 1 54 0 493 246 25 17 chr5 45124580 45124698 -157960834 - AluJo SINE Alu -109 203 85 2200 141 0 0 chr5 45125584 45125896 -157959636 + AluSx SINE Alu 1 312 0 31 0 0 0 chr5 45126552 45126583 -157958949 + AT_rich Low_complexity Low_complexity 1 31 0 2232 94 0 7 chr5 45126980 45127278 -157958254 + AluSq SINE Alu 1 296 -17 869 336 55 22 chr5 45128477 45128879 -157956653 + L2 LINE L2 133 547 -2767 1805 179 24 15 chr5 45129304 45129644 -157955888 - MER2 DNA MER2_type 0 344 2 633 228 0 37 chr5 45130080 45130216 -157955316 - FLAM_A SINE Alu 0 133 3 1270 193 22 58 chr5 45130477 45130788 -157954744 + L1MB2 LINE L1 4070 4369 -1777 3110 196 34 17 chr5 45130788 45131499 -157954033 + L1MB2 LINE L1 5447 6169 -2 2197 90 3 10 chr5 45131564 45131863 -157953669 + AluY SINE Alu 2 298 -13 41549 56 10 1 chr5 45132031 45138123 -157947409 - L1PA5 LINE L1 -5 6149 1 416 183 0 0 chr5 45138382 45138464 -157947068 - L1MC2 LINE L1 -132 6212 6131 * 514 214 29 29 chr5 45138463 45138603 -157946929 + L1MC2 LINE L1 6197 6336 -8 2488 70 0 0 chr5 45140333 45140633 -157944899 - AluY SINE Alu -11 300 1 196 368 0 0 chr5 45140832 45140889 -157944643 - L2 LINE L2 -33 3239 3183 644 291 109 18 chr5 45141049 45141324 -157944208 - LTR16A LTR ERVL -148 302 3 399 297 88 96 chr5 45141940 45142840 -157942692 - HERV16 LTR ERVL -548 4448 3562 430 327 13 0 chr5 45142856 45143012 -157942520 - HERV16 LTR ERVL -2727 2269 2112 30 59 0 0 chr5 45145887 45145938 -157939594 + AT_rich Low_complexity Low_complexity 1 51 0 253 357 80 0 chr5 45147257 45147369 -157938163 - MIR SINE MIR -67 141 21 651 267 104 59 chr5 45148205 45148542 -157936990 - L2 LINE L2 -12 3301 2950 468 307 97 64 chr5 45148575 45149060 -157936472 - L2 LINE L2 -443 2871 2371 583 338 84 10 chr5 45149066 45149362 -157936170 - L2 LINE L2 -8 3305 2988 1673 302 90 51 chr5 45149412 45149626 -157935906 - L2 LINE L2 -1022 2292 2088 2352 110 0 0 chr5 45149626 45149934 -157935598 + AluSc SINE Alu 1 308 -1 1673 302 90 51 chr5 45149934 45150218 -157935314 - L2 LINE L2 -1226 2088 1817 288 0 0 0 chr5 45150218 45150250 -157935282 + (TG)n Simple_repeat Simple_repeat 1 32 0 1673 302 90 51 chr5 45150250 45151115 -157934417 - L2 LINE L2 -1497 1817 836 2200 141 0 0 chr5 45151427 45151739 -157933793 - AluSx SINE Alu 0 312 1 1033 218 15 10 chr5 45152625 45152831 -157932701 + AluJb SINE Alu 85 291 -21 24 32 0 0 chr5 45153190 45153221 -157932311 + AT_rich Low_complexity Low_complexity 1 31 0 2374 82 7 0 chr5 45153482 45153787 -157931745 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr5 45155077 45155101 -157930431 + AT_rich Low_complexity Low_complexity 1 24 0 1136 178 49 13 chr5 45155148 45155373 -157930159 - MER46A DNA MER2_type -3 233 1 673 251 87 19 chr5 45155744 45155951 -157929581 - MIR SINE MIR -5 257 37 4484 122 55 87 chr5 45158224 45158424 -157927108 - L1MA9 LINE L1 -6 6306 6101 310 102 41 0 chr5 45158424 45158473 -157927059 - MADE1 DNA Mariner -29 51 1 315 0 0 0 chr5 45158473 45158508 -157927024 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4484 122 55 87 chr5 45158508 45159213 -157926319 - L1MA9 LINE L1 -209 6103 5382 2501 223 35 20 chr5 45159210 45159866 -157925666 + L1MA9 LINE L1 4738 5403 -743 * 25 31 0 0 chr5 45160982 45161014 -157924518 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 45161337 45161360 -157924172 + AT_rich Low_complexity Low_complexity 1 23 0 375 271 85 27 chr5 45161477 45161665 -157923867 - HAL1 LINE L1 -124 2383 2185 840 231 138 80 chr5 45161878 45162599 -157922933 + L1ME LINE L1 4529 5321 -843 2118 80 42 0 chr5 45162599 45162886 -157922646 - AluSc SINE Alu -5 304 6 840 231 138 80 chr5 45162886 45163098 -157922434 + L1ME LINE L1 5321 5519 -645 544 255 34 0 chr5 45163246 45163395 -157922137 - LTR33 LTR ERVL -365 156 3 26 0 0 0 chr5 45164117 45164143 -157921389 + AT_rich Low_complexity Low_complexity 1 26 0 7102 113 14 44 chr5 45164195 45165354 -157920178 - Tigger1 DNA MER2_type -4 2414 1291 7332 158 24 18 chr5 45168371 45169673 -157915859 - Tigger1 DNA MER2_type -1109 1309 1 283 301 38 49 chr5 45169715 45169898 -157915634 - L1ME LINE L1 -420 5701 5521 288 358 114 46 chr5 45170000 45170564 -157914968 + L2 LINE L2 2496 3088 -225 702 284 143 39 chr5 45170723 45171212 -157914320 + Charlie2a DNA MER1_type 326 865 -1997 34 65 0 0 chr5 45171817 45171879 -157913653 + AT_rich Low_complexity Low_complexity 1 62 0 1472 169 117 4 chr5 45172198 45172464 -157913068 + AluSx SINE Alu 1 296 -16 227 333 99 7 chr5 45173017 45173158 -157912374 + MIR3 SINE MIR 38 191 -17 308 171 0 26 chr5 45173506 45173582 -157911950 - L1MB7 LINE L1 -2 6182 6109 951 272 99 35 chr5 45174295 45174863 -157910669 + L1M4 LINE L1 1508 2159 -4485 1395 259 128 7 chr5 45174942 45175743 -157909789 + L1M4 LINE L1 2346 3232 -3412 245 221 16 98 chr5 45175745 45175867 -157909665 + L1M4 LINE L1 5028 5139 -1505 1814 76 34 11 chr5 45176026 45176290 -157909242 - AluY SINE Alu -41 270 1 2254 92 0 3 chr5 45177790 45178093 -157907439 - AluY SINE Alu -9 302 1 2048 53 7 25 chr5 45178719 45179004 -157906528 + L1P LINE L1 4 283 -5863 14547 43 68 4 chr5 45179131 45181013 -157904519 - L1P LINE L1 -3762 2384 383 658 249 84 4 chr5 45181144 45181451 -157904081 - L1M4 LINE L1 -5143 1399 1070 436 105 186 0 chr5 45181455 45181541 -157903991 - AluSg/x SINE Alu 0 312 211 284 333 8 16 chr5 45181757 45181880 -157903652 - L1M4 LINE L1 -5668 874 753 257 0 30 0 chr5 45182144 45182177 -157903355 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 230 250 78 55 chr5 45182290 45182418 -157903114 - L1M4 LINE L1 -6304 238 108 309 133 0 0 chr5 45182421 45182466 -157903066 + MER85 DNA T2_type 95 139 0 21 0 0 0 chr5 45182589 45182610 -157902922 + AT_rich Low_complexity Low_complexity 1 21 0 2467 124 11 102 chr5 45182895 45183364 -157902168 - MSTA LTR MaLR 0 428 3 779 176 0 0 chr5 45183784 45183920 -157901612 + FLAM_C SINE Alu 8 143 0 384 262 103 0 chr5 45184120 45184227 -157901305 - MIR SINE MIR -88 174 57 21 36 0 0 chr5 45184261 45184289 -157901243 + AT_rich Low_complexity Low_complexity 1 28 0 2174 115 7 0 chr5 45184301 45184597 -157900935 + AluSg SINE Alu 3 300 -10 205 106 21 43 chr5 45184636 45184683 -157900849 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 24 0 0 0 chr5 45186058 45186082 -157899450 + AT_rich Low_complexity Low_complexity 1 24 0 679 240 258 0 chr5 45186130 45186244 -157899288 - L1MD2 LINE L1 -97 6262 6179 207 0 0 0 chr5 45186244 45186267 -157899265 + (TG)n Simple_repeat Simple_repeat 2 24 0 679 240 258 0 chr5 45186267 45186423 -157899109 - L1MD2 LINE L1 -180 6179 5922 618 313 83 13 chr5 45186718 45187018 -157898514 + Charlie2 DNA MER1_type 1 321 -2461 2652 232 46 24 chr5 45187025 45187837 -157897695 + Charlie2 DNA MER1_type 1857 2695 -167 1020 201 55 109 chr5 45187837 45188221 -157897311 - MLT1A1 LTR MaLR -2 363 1 2652 232 46 24 chr5 45188221 45188359 -157897173 + Charlie2 DNA MER1_type 2695 2828 -34 28 0 0 0 chr5 45188486 45188514 -157897018 + AT_rich Low_complexity Low_complexity 1 28 0 1085 140 5 42 chr5 45188656 45188764 -157896768 - MSTB1 LTR MaLR 0 432 333 1763 139 78 36 chr5 45188764 45189124 -157896408 + THE1C LTR MaLR 1 375 0 1085 140 5 42 chr5 45189124 45189208 -157896324 - MSTB1 LTR MaLR -99 333 247 540 161 0 0 chr5 45189215 45189302 -157896230 - AluJ/FLAM SINE Alu -225 87 1 1039 204 53 41 chr5 45189302 45189547 -157895985 - MSTB1 LTR MaLR -184 248 1 29 47 0 0 chr5 45189703 45189746 -157895786 + AT_rich Low_complexity Low_complexity 1 43 0 6476 241 64 69 chr5 45189856 45190504 -157895028 + L1M4c LINE L1 11 661 -5723 1539 205 28 3 chr5 45190504 45190792 -157894740 + AluJo SINE Alu 1 295 -17 1503 196 3 29 chr5 45190792 45191104 -157894428 + AluJo SINE Alu 1 304 -8 6476 241 64 69 chr5 45191104 45192403 -157893129 + L1M4c LINE L1 660 1947 -4437 2285 137 17 3 chr5 45192403 45192762 -157892770 + THE1B LTR MaLR 1 364 0 6476 241 64 69 chr5 45192762 45193249 -157892283 + L1M4c LINE L1 1947 2435 -3949 394 278 216 6 chr5 45193411 45193573 -157891959 - MIR SINE MIR 0 262 67 21 0 0 0 chr5 45194283 45194304 -157891228 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 45194442 45194471 -157891061 + AT_rich Low_complexity Low_complexity 1 29 0 407 141 207 83 chr5 45195116 45195188 -157890344 + L1MB2 LINE L1 6033 6095 -76 2349 99 0 0 chr5 45195188 45195490 -157890042 + AluSq SINE Alu 1 302 -11 407 141 207 83 chr5 45195490 45195538 -157889994 + L1MB2 LINE L1 6095 6168 -3 416 245 0 31 chr5 45195711 45195809 -157889723 + L2 LINE L2 3202 3296 -17 23 54 0 0 chr5 45195850 45195887 -157889645 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr5 45195955 45195975 -157889557 + (T)n Simple_repeat Simple_repeat 1 20 0 2227 116 7 0 chr5 45196235 45196545 -157888987 + AluSq SINE Alu 2 313 0 525 273 104 44 chr5 45196865 45197118 -157888414 - Zaphod DNA AcHobo -10 4021 3716 22 0 0 0 chr5 45197118 45197140 -157888392 + AT_rich Low_complexity Low_complexity 1 22 0 525 273 104 44 chr5 45197140 45197249 -157888283 - Zaphod DNA AcHobo -315 3716 3615 372 158 75 68 chr5 45197269 45197547 -157887985 - Zaphod DNA AcHobo -3046 985 706 23 0 0 0 chr5 45198130 45198153 -157887379 + AT_rich Low_complexity Low_complexity 1 23 0 184 316 35 18 chr5 45200202 45200259 -157885273 + MIR SINE MIR 21 78 -184 423 38 0 0 chr5 45200268 45200321 -157885211 + (TG)n Simple_repeat Simple_repeat 2 54 0 216 302 179 9 chr5 45200322 45200428 -157885104 + MIR SINE MIR 129 252 -10 2231 101 3 3 chr5 45200471 45200779 -157884753 + AluSx SINE Alu 1 308 -4 314 304 9 9 chr5 45200892 45201007 -157884525 + GA-rich Low_complexity Low_complexity 2 116 0 227 170 0 19 chr5 45201331 45201384 -157884148 + (TTA)n Simple_repeat Simple_repeat 1 52 0 3513 244 57 15 chr5 45201430 45202692 -157882840 + L1MCb LINE L1 1 1317 -4849 527 250 86 0 chr5 45202780 45202920 -157882612 + FRAM SINE Alu 1 152 -14 28 0 0 0 chr5 45202923 45202951 -157882581 + AT_rich Low_complexity Low_complexity 1 28 0 1237 246 85 14 chr5 45203040 45203406 -157882126 + L1M4 LINE L1 3718 4109 -2037 243 0 0 0 chr5 45203407 45203434 -157882098 + (A)n Simple_repeat Simple_repeat 1 27 0 478 271 0 0 chr5 45203444 45203551 -157881981 - FLAM_A SINE Alu -26 116 10 284 258 0 0 chr5 45203557 45203623 -157881909 + L1M4 LINE L1 4097 4162 -1984 280 243 63 9 chr5 45203892 45204003 -157881529 - L1MC4 LINE L1 -824 7218 7102 585 263 0 0 chr5 45204085 45204203 -157881329 - MER45C DNA AcHobo -835 118 1 611 261 8 8 chr5 45205006 45205136 -157880396 + MER45A DNA AcHobo 11 140 -38 2445 73 0 6 chr5 45205186 45205499 -157880033 + AluY SINE Alu 1 311 0 1396 178 44 18 chr5 45206600 45206875 -157878657 - MLT1C LTR MaLR -183 284 3 2567 193 13 28 chr5 45207620 45208155 -157877377 - L1PA16 LINE L1 -1 6165 5639 * 4056 202 13 13 chr5 45208152 45209051 -157876481 + L1 LINE L1 4066 4964 -1182 2536 68 3 0 chr5 45209065 45209374 -157876158 - AluSp SINE Alu -3 310 1 782 231 118 25 chr5 45209374 45209800 -157875732 - Charlie2 DNA MER1_type -386 2476 2008 366 181 0 0 chr5 45209799 45209871 -157875661 + Charlie2 DNA MER1_type 1938 2009 -853 * 23 0 0 0 chr5 45210563 45210586 -157874946 + AT_rich Low_complexity Low_complexity 1 23 0 1898 126 42 3 chr5 45211029 45211315 -157874217 + AluSx SINE Alu 1 297 -15 284 288 131 50 chr5 45211331 45211379 -157874153 + MIR3 SINE MIR 4 47 -161 1641 198 33 17 chr5 45211379 45211535 -157873997 - MLT1A1 LTR MaLR 0 365 213 1832 166 31 0 chr5 45211535 45211824 -157873708 - AluSx SINE Alu -14 298 1 1641 198 33 17 chr5 45211824 45212026 -157873506 - MLT1A1 LTR MaLR -152 213 1 284 288 131 50 chr5 45212026 45212137 -157873395 + MIR3 SINE MIR 47 176 -32 270 248 40 84 chr5 45212470 45212672 -157872860 - HAL1b LINE L1 -3 1345 1153 5127 143 21 13 chr5 45212723 45213594 -157871938 - L1PA15 LINE L1 -6 6159 5282 511 283 21 11 chr5 45213701 45213892 -157871640 - HAL1b LINE L1 -630 718 526 428 358 51 32 chr5 45214065 45214378 -157871154 - HAL1b LINE L1 -927 421 103 342 357 94 9 chr5 45215798 45216022 -157869510 - L1MC4a LINE L1 -1734 6074 5832 4017 114 15 5 chr5 45216038 45216652 -157868880 - L1PA13 LINE L1 -6 6157 5538 728 94 0 0 chr5 45216652 45216748 -157868784 + L1PA12 LINE L1 6 101 -7480 248 304 120 0 chr5 45216746 45216871 -157868661 - L1MC4a LINE L1 -1985 5823 5684 * 524 257 61 37 chr5 45216888 45217012 -157868520 - L1MC4a LINE L1 -2239 5569 5436 3316 176 7 10 chr5 45217012 45217619 -157867913 - MER6A DNA MER2_type 0 605 1 524 257 61 37 chr5 45217619 45217708 -157867824 - L1MC4a LINE L1 -2372 5436 5351 557 106 0 0 chr5 45218990 45219075 -157866457 + Alu SINE Alu 225 309 0 531 351 144 3 chr5 45219075 45219465 -157866067 - L2 LINE L2 -1494 1820 1376 189 0 0 0 chr5 45219608 45219629 -157865903 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 198 0 0 0 chr5 45219628 45219650 -157865882 + (TA)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr5 45221129 45221155 -157864377 + (TTG)n Simple_repeat Simple_repeat 2 27 0 948 236 102 38 chr5 45221217 45221590 -157863942 - MLT2C1 LTR ERVL 0 397 1 238 314 81 16 chr5 45222989 45223113 -157862419 - MARNA DNA Mariner -81 505 374 450 313 28 28 chr5 45223507 45223721 -157861811 + MLT1I LTR MaLR 19 232 -177 2284 50 14 0 chr5 45224960 45225239 -157860293 + AluY SINE Alu 1 283 -28 373 181 42 0 chr5 45225907 45225978 -157859554 - Charlie7 DNA MER1_type -614 1998 1925 915 224 18 7 chr5 45225978 45226025 -157859507 - MLT2B2 LTR ERVL -2 513 468 1984 146 18 15 chr5 45226025 45226368 -157859164 + MER2 DNA MER2_type 1 344 0 915 224 18 7 chr5 45226368 45226600 -157858932 - MLT2B2 LTR ERVL -47 468 144 2387 46 0 0 chr5 45226613 45226896 -157858636 + AluY SINE Alu 1 283 -28 1861 205 8 13 chr5 45227667 45228058 -157857474 - MLT1B LTR MaLR 0 390 2 1746 171 129 3 chr5 45228144 45228524 -157857008 - MER63B DNA MER1_type -8 428 1 404 288 129 6 chr5 45228748 45228911 -157856621 + MIR SINE MIR 49 231 -31 1132 287 35 39 chr5 45229284 45229744 -157855788 + LTR16B LTR ERVL 3 460 -4 2335 318 55 41 chr5 45230021 45230578 -157854954 + HERV16 LTR ERVL 299 846 -4150 2126 124 0 0 chr5 45230578 45230860 -157854672 + AluSx SINE Alu 1 282 -30 2335 318 55 41 chr5 45230860 45230873 -157854659 + HERV16 LTR ERVL 846 857 -4139 195 42 0 0 chr5 45230873 45230897 -157854635 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2335 318 55 41 chr5 45230897 45231577 -157853955 + HERV16 LTR ERVL 857 1568 -3428 342 274 57 63 chr5 45231764 45231939 -157853593 - MERVL LTR ERVL -1179 4306 4136 660 287 40 60 chr5 45232019 45232367 -157853165 - MERVL LTR ERVL -1303 3693 3353 1087 307 41 14 chr5 45232423 45232859 -157852673 - LTR16B LTR ERVL -14 450 3 301 247 86 0 chr5 45232909 45233002 -157852530 + MER103 DNA DNA 57 157 -9 28 0 0 0 chr5 45233443 45233471 -157852061 + AT_rich Low_complexity Low_complexity 1 28 0 1864 234 16 59 chr5 45234846 45235808 -157849724 - L1ME1 LINE L1 -123 6043 5017 1829 161 49 23 chr5 45235808 45236157 -157849375 + MER46B DNA MER2_type 4 236 0 1864 234 16 59 chr5 45236157 45236326 -157849206 - L1ME1 LINE L1 -1149 5017 4842 1813 230 4 32 chr5 45236356 45236817 -157848715 - L1ME LINE L1 -458 5708 5261 1742 259 58 37 chr5 45236787 45237495 -157848037 - L1ME1 LINE L1 -1309 4837 4115 * 1974 96 54 7 chr5 45237798 45238078 -157847454 + AluSg SINE Alu 1 293 -17 304 359 41 21 chr5 45238906 45239051 -157846481 + MIR SINE MIR 53 200 -62 201 323 42 21 chr5 45240948 45241044 -157844488 + L2 LINE L2 2920 3017 -255 229 262 0 0 chr5 45241721 45241782 -157843750 - Charlie7 DNA MER1_type -2136 476 416 1363 207 126 24 chr5 45241799 45242171 -157843361 + MER66A LTR ERV1 29 438 -40 232 348 36 0 chr5 45242207 45242319 -157843213 - Charlie7 DNA MER1_type -2239 373 258 1630 281 16 21 chr5 45242326 45242810 -157842722 - MLT1H1 LTR MaLR -5 550 69 1861 131 4 0 chr5 45243627 45243886 -157841646 + AluSx SINE Alu 1 260 -52 1735 162 107 23 chr5 45243901 45244247 -157841285 - THE1C LTR MaLR 0 375 1 254 350 107 13 chr5 45245778 45246087 -157839445 + L1MC/D LINE L1 5282 5619 -2189 768 186 87 0 chr5 45246201 45246373 -157839159 + L1MA4 LINE L1 6108 6294 -6 801 146 85 38 chr5 45246385 45246452 -157839080 - MER96B DNA MER1_type? -47 370 308 2135 104 3 22 chr5 45246452 45246769 -157838763 + AluY SINE Alu 1 311 0 801 146 85 38 chr5 45246769 45246913 -157838619 - MER96B DNA MER1_type? -109 308 149 260 200 0 0 chr5 45246921 45246966 -157838566 + MER96B DNA MER1_type? 373 417 0 234 0 0 0 chr5 45247501 45247527 -157838005 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 595 229 57 69 chr5 45247807 45247982 -157837550 + MER5B DNA MER1_type 1 173 -5 231 243 14 29 chr5 45248018 45248088 -157837444 + MER5A DNA MER1_type 39 107 -82 344 249 11 102 chr5 45249268 45249405 -157836127 - FLAM_A SINE Alu -29 104 1 278 336 90 27 chr5 45251055 45251311 -157834221 + L2 LINE L2 2391 2662 -652 3131 198 29 89 chr5 45251778 45252806 -157832726 - LTR5 LTR ERVK 0 969 4 1287 273 114 12 chr5 45252970 45253749 -157831783 + L2 LINE L2 2480 3312 -1 236 275 38 25 chr5 45253785 45253865 -157831667 + MIR3 SINE MIR 125 205 -3 927 237 119 58 chr5 45254068 45254537 -157830995 + LTR33 LTR ERVL 6 503 -18 1937 164 6 6 chr5 45254611 45254923 -157830609 + AluJo SINE Alu 1 312 0 2301 104 3 0 chr5 45256574 45256881 -157828651 + AluSg SINE Alu 1 308 -2 2196 122 0 0 chr5 45256939 45257242 -157828290 + AluSc SINE Alu 1 303 -6 714 143 23 8 chr5 45257291 45257424 -157828108 + L1MB3 LINE L1 6041 6175 -8 1808 164 14 0 chr5 45257785 45258077 -157827455 + AluJb SINE Alu 12 307 -5 4374 192 36 8 chr5 45258121 45259049 -157826483 + L1P4 LINE L1 4379 5332 -814 443 136 0 144 chr5 45259051 45259132 -157826400 + MER50 LTR ERV1 498 558 -176 2169 90 4 0 chr5 45259132 45259437 -157826095 - AluSx SINE Alu 0 310 5 443 136 0 144 chr5 45259437 45259479 -157826053 + MER50 LTR ERV1 558 604 -130 2124 129 26 6 chr5 45259484 45259826 -157825706 + L1P4 LINE L1 5317 5665 -500 193 303 30 0 chr5 45261910 45261976 -157823556 - MIR SINE MIR -1 261 194 815 196 0 7 chr5 45261985 45262133 -157823399 - FRAM SINE Alu -27 149 3 342 0 0 0 chr5 45262135 45262173 -157823359 + (TG)n Simple_repeat Simple_repeat 1 38 0 273 250 40 13 chr5 45262319 45262395 -157823137 - HAL1b LINE L1 -439 909 832 312 227 10 21 chr5 45262510 45262607 -157822925 - HAL1b LINE L1 -507 841 746 363 264 0 0 chr5 45262636 45262723 -157822809 - HAL1 LINE L1 -343 2164 2078 1768 182 16 65 chr5 45263506 45263890 -157821642 + MLT1A1 LTR MaLR 1 365 0 1147 200 111 51 chr5 45264026 45264341 -157821191 - MLT1D LTR MaLR 0 505 172 341 248 20 30 chr5 45264592 45264693 -157820839 - MIR SINE MIR -134 128 29 740 239 68 56 chr5 45264845 45265096 -157820436 + MIR SINE MIR 9 262 0 2170 147 48 17 chr5 45265735 45266088 -157819444 + THE1B LTR MaLR 1 364 0 3280 86 22 12 chr5 45266088 45266579 -157818953 + THE1B-int LTR MaLR 1 496 -1084 7973 165 60 17 chr5 45266732 45268208 -157817324 + MLT1A1-int LTR MaLR 113 1651 0 2788 138 23 28 chr5 45268208 45268636 -157816896 + MSTB LTR MaLR 1 426 0 392 157 48 24 chr5 45268658 45268741 -157816791 - L1M4 LINE L1 -1232 4914 4830 363 222 24 32 chr5 45268888 45269014 -157816518 + CT-rich Low_complexity Low_complexity 4 128 0 322 271 198 44 chr5 45269027 45269300 -157816232 - HAL1 LINE L1 -1312 1195 881 22 56 0 0 chr5 45269901 45269937 -157815595 + AT_rich Low_complexity Low_complexity 1 36 0 471 304 93 12 chr5 45270470 45270631 -157814901 + MER91A DNA MER1_type 1 174 -22 230 325 13 26 chr5 45270641 45270718 -157814814 + MER91A DNA MER1_type 121 196 0 1366 127 71 24 chr5 45271168 45271420 -157814112 - MSTA LTR MaLR -164 264 1 1110 165 12 22 chr5 45271420 45271629 -157813903 - L1MC/D LINE L1 -545 5626 5419 263 305 191 0 chr5 45272604 45272735 -157812797 + MIR3 SINE MIR 33 188 -20 509 281 20 7 chr5 45274223 45274376 -157811156 - MER103 DNA DNA 0 166 12 2224 127 3 0 chr5 45274460 45274768 -157810764 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 45274894 45274922 -157810610 + AT_rich Low_complexity Low_complexity 1 28 0 386 0 0 0 chr5 45275200 45275244 -157810288 - MADE1 DNA Mariner 0 80 37 341 91 169 0 chr5 45275996 45276073 -157809459 + AluSc SINE Alu 203 292 -7 234 0 0 0 chr5 45277962 45277988 -157807544 + (T)n Simple_repeat Simple_repeat 1 26 0 316 265 24 12 chr5 45279379 45279462 -157806070 + MIR SINE MIR 28 111 -151 2208 108 7 0 chr5 45279593 45279888 -157805644 + AluSp SINE Alu 1 297 -16 1669 147 82 0 chr5 45280136 45280428 -157805104 - L1MC1 LINE L1 -30 6303 5988 187 295 180 0 chr5 45281592 45281653 -157803879 + MER5B DNA MER1_type 51 122 -56 342 298 147 23 chr5 45281802 45282020 -157803512 + MIR SINE MIR 10 254 -8 2130 119 0 3 chr5 45282028 45282323 -157803209 + AluSg1 SINE Alu 1 294 -15 697 279 60 4 chr5 45282665 45282898 -157802634 - MLT1L LTR MaLR -2 613 368 2684 38 0 13 chr5 45282954 45283269 -157802263 + AluY SINE Alu 1 311 0 477 240 40 32 chr5 45283269 45283394 -157802138 - MLT1L LTR MaLR -338 277 152 447 306 37 0 chr5 45283422 45283530 -157802002 + L2 LINE L2 3161 3272 0 1369 164 61 24 chr5 45284224 45284517 -157801015 + AluJo SINE Alu 9 312 0 302 215 153 62 chr5 45284636 45284829 -157800703 - L1ME4a LINE L1 -4 6117 5943 1740 154 27 13 chr5 45284829 45285127 -157800405 - AluJb SINE Alu -10 302 1 302 215 153 62 chr5 45285127 45285327 -157800205 - L1ME4a LINE L1 -178 5943 5652 356 203 0 0 chr5 45285531 45285600 -157799932 + AluJ/FLAM SINE Alu 1 69 -233 243 231 0 0 chr5 45285629 45285681 -157799851 + G-rich Low_complexity Low_complexity 1 52 0 830 180 111 11 chr5 45285684 45285873 -157799659 + MER50 LTR ERV1 33 240 -494 * 1930 115 7 7 chr5 45285856 45286135 -157799397 + MER50 LTR ERV1 433 711 -23 258 267 0 0 chr5 45286136 45286196 -157799336 + FLAM_A SINE Alu 67 126 -7 181 326 132 16 chr5 45286453 45286582 -157798950 + MIR SINE MIR 3 146 -116 272 279 196 13 chr5 45286614 45286772 -157798760 - MIR SINE MIR -54 208 22 953 166 44 57 chr5 45286920 45287149 -157798383 - MER96B DNA MER1_type? 0 417 192 41 87 0 0 chr5 45287964 45288068 -157797464 + AT_rich Low_complexity Low_complexity 1 104 0 2202 96 17 3 chr5 45288074 45288376 -157797156 + AluSx SINE Alu 1 306 -6 662 281 81 37 chr5 45288621 45288967 -157796565 - MLT1J2 LTR MaLR -36 410 19 425 315 13 34 chr5 45288990 45289228 -157796304 + L1MC4a LINE L1 5694 5926 -1882 394 238 70 75 chr5 45289228 45289455 -157796077 + L1MC4a LINE L1 5711 5936 -1872 261 206 0 48 chr5 45289898 45289961 -157795571 + MLT1J2 LTR MaLR 38 97 -353 241 263 30 61 chr5 45290177 45290276 -157795256 - L2 LINE L2 -12 3260 3165 1658 193 52 60 chr5 45290384 45290726 -157794806 - MLT2B1 LTR ERVL -139 381 41 4306 61 322 0 chr5 45290726 45291351 -157794181 + LTR12 LTR ERV1 1 826 0 1658 193 52 60 chr5 45291351 45291392 -157794140 - MLT2B1 LTR ERVL -479 41 1 628 267 107 15 chr5 45293247 45293453 -157792079 + MIR SINE MIR 23 247 -15 183 393 9 0 chr5 45293502 45293609 -157791923 - L2 LINE L2 -642 2672 2565 467 308 128 73 chr5 45294196 45294663 -157790869 + MLT1K LTR MaLR 96 588 0 676 209 310 45 chr5 45295483 45295751 -157789781 + MLT1D LTR MaLR 1 339 -166 * 2195 148 36 44 chr5 45295738 45295781 -157789751 - MLT2D LTR ERVL -6 408 366 297 0 0 0 chr5 45295781 45295814 -157789718 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 2195 148 36 44 chr5 45295814 45295953 -157789579 - MLT2D LTR ERVL -48 366 227 2285 109 6 3 chr5 45295953 45296265 -157789267 + AluSp SINE Alu 1 313 0 2195 148 36 44 chr5 45296265 45296492 -157789040 - MLT2D LTR ERVL -187 227 1 673 186 161 47 chr5 45297261 45297372 -157788160 + Charlie4a DNA MER1_type 126 223 -1738 2334 89 0 7 chr5 45297372 45297674 -157787858 + AluSx SINE Alu 1 300 -12 673 186 161 47 chr5 45297674 45297841 -157787691 + Charlie4a DNA MER1_type 223 436 -72 894 164 0 0 chr5 45297846 45297980 -157787552 + AluJo SINE Alu 1 134 -178 414 149 27 14 chr5 45297980 45298054 -157787478 + Charlie4a DNA MER1_type 431 505 -3 2061 144 99 9 chr5 45298786 45299120 -157786412 - MLT1A1 LTR MaLR -1 364 1 645 252 110 8 chr5 45299907 45300125 -157785407 - MIR SINE MIR -11 251 15 2386 119 9 9 chr5 45300169 45300506 -157785026 - MER1B DNA MER1_type 0 337 1 679 217 84 110 chr5 45302220 45302499 -157783033 + L1MC4a LINE L1 5581 5866 -255 1830 158 3 10 chr5 45302499 45302790 -157782742 + AluJb SINE Alu 1 289 -23 207 0 0 0 chr5 45302792 45302815 -157782717 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 234 0 0 0 chr5 45302814 45302840 -157782692 + (TA)n Simple_repeat Simple_repeat 1 26 0 679 217 84 110 chr5 45302815 45302926 -157782606 + L1MC4a LINE L1 5867 5945 -176 231 36 0 0 chr5 45302931 45302959 -157782573 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1153 172 21 0 chr5 45302961 45303153 -157782379 - AluJo SINE Alu -30 282 87 21 36 0 0 chr5 45303153 45303181 -157782351 + AT_rich Low_complexity Low_complexity 1 28 0 451 307 40 28 chr5 45303181 45303357 -157782175 + MER5A DNA MER1_type 12 189 0 967 179 5 32 chr5 45303445 45303635 -157781897 - AluJo SINE Alu -2 310 126 2029 118 6 53 chr5 45303777 45304098 -157781434 + AluSx SINE Alu 1 306 -6 406 280 48 8 chr5 45304162 45304287 -157781245 - L2 LINE L2 -1 3312 3183 210 275 73 46 chr5 45304311 45304420 -157781112 - L2 LINE L2 -249 3064 2953 496 254 14 22 chr5 45305739 45305877 -157779655 + MER5A DNA MER1_type 52 188 -1 653 295 36 10 chr5 45306055 45306248 -157779284 - MER115 DNA AcHobo -438 255 58 2628 34 7 0 chr5 45306745 45307043 -157778489 - AluY SINE Alu -11 300 1 30 77 0 0 chr5 45307938 45308003 -157777529 + AT_rich Low_complexity Low_complexity 1 65 0 316 115 39 0 chr5 45308037 45308089 -157777443 - MER116 DNA Mariner 0 80 27 368 130 14 0 chr5 45309916 45309985 -157775547 + CT-rich Low_complexity Low_complexity 1 70 0 24 0 0 0 chr5 45311136 45311160 -157774372 + AT_rich Low_complexity Low_complexity 1 24 0 252 236 0 0 chr5 45311330 45311419 -157774113 + T-rich Low_complexity Low_complexity 1 89 0 351 279 72 72 chr5 45311490 45311852 -157773680 - L1M3c LINE L1 -4591 1550 1189 322 319 72 42 chr5 45311923 45312089 -157773443 + MIR SINE MIR 9 179 -83 241 194 65 0 chr5 45313207 45313269 -157772263 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 250 234 78 0 chr5 45314131 45314195 -157771337 + MIR SINE MIR 36 104 -104 1712 207 30 22 chr5 45314422 45314784 -157770748 - MLT1A1 LTR MaLR 0 365 1 273 164 0 36 chr5 45314978 45315033 -157770499 - MIR3 SINE MIR -48 160 108 1885 149 7 13 chr5 45315427 45315736 -157769796 + AluJb SINE Alu 1 307 -5 1757 199 30 38 chr5 45315800 45316193 -157769339 - MLT1B LTR MaLR 0 390 1 7698 184 114 20 chr5 45316417 45318017 -157767515 + MER52A LTR ERV1 6 1755 0 2634 154 90 0 chr5 45318172 45318489 -157767043 + L1MB2 LINE L1 5450 5826 -345 180 0 0 0 chr5 45318489 45318509 -157767023 + (TA)n Simple_repeat Simple_repeat 1 20 0 2634 154 90 0 chr5 45318509 45318670 -157766862 + L1MB2 LINE L1 5826 5971 -200 1647 209 3 3 chr5 45318670 45318962 -157766570 + AluJo SINE Alu 1 292 -20 322 65 0 0 chr5 45318978 45319024 -157766508 - L1PA7 LINE L1 -4 6150 6105 293 286 0 14 chr5 45319126 45319196 -157766336 - MER5B DNA MER1_type -109 69 1 2043 113 3 7 chr5 45319399 45319706 -157765826 + AluSx SINE Alu 2 307 0 2444 121 39 17 chr5 45319776 45320132 -157765400 - THE1B LTR MaLR 0 364 1 4879 87 0 11 chr5 45320132 45320787 -157764745 - THE1B-int LTR MaLR 0 1580 933 468 215 0 9 chr5 45322244 45322351 -157763181 - AluSp/q SINE Alu 0 313 208 190 315 27 0 chr5 45323071 45323144 -157762388 + L2 LINE L2 3192 3266 -47 1719 154 39 0 chr5 45324463 45324742 -157760790 - AluJo SINE Alu 0 312 23 699 266 58 11 chr5 45324742 45325020 -157760512 + L1MC4a LINE L1 5597 5887 -1921 1905 123 28 14 chr5 45325049 45325334 -157760198 + AluSx SINE Alu 1 289 -23 329 279 37 37 chr5 45325710 45325846 -157759686 - LTR67 LTR ERVL -266 291 156 974 231 15 132 chr5 45326833 45327357 -157758175 - LTR67 LTR ERVL 0 557 95 269 230 115 30 chr5 45327589 45327754 -157757778 - L1ME4a LINE L1 -4 6117 5939 1643 168 68 0 chr5 45328145 45328425 -157757107 + AluJo SINE Alu 1 299 -13 228 219 171 8 chr5 45328436 45328559 -157756973 - L1ME4a LINE L1 -844 5302 5160 251 261 149 30 chr5 45328689 45328823 -157756709 + L2 LINE L2 2366 2515 -799 1674 117 0 0 chr5 45328926 45329148 -157756384 - AluSx SINE Alu -90 222 1 415 274 134 24 chr5 45329731 45330402 -157755130 + L1MC5 LINE L1 7098 7671 -290 715 195 76 22 chr5 45330402 45330587 -157754945 + LTR41 LTR ERVL 1 195 -578 2183 92 0 42 chr5 45331045 45331351 -157754181 - AluSg SINE Alu -17 293 1 296 24 0 24 chr5 45331383 45331425 -157754107 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 619 206 122 23 chr5 45331433 45331564 -157753968 - FRAM SINE Alu -32 144 1 1678 149 41 30 chr5 45331574 45331869 -157753663 - AluJb SINE Alu -14 298 1 396 153 14 0 chr5 45331869 45331941 -157753591 + LTR41 LTR ERVL 700 772 -1 493 223 69 8 chr5 45331946 45332076 -157753456 + L1MC4 LINE L1 7781 7918 -124 228 280 17 59 chr5 45332107 45332225 -157753307 + L1MC4 LINE L1 7904 8016 -26 1731 157 7 27 chr5 45332242 45332535 -157752997 + AluJb SINE Alu 1 287 -25 215 159 23 0 chr5 45333332 45333376 -157752156 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 264 269 184 18 chr5 45333400 45333709 -157751823 + LTR16A1 LTR ERVL 55 457 0 381 228 53 132 chr5 45333959 45334187 -157751345 - L1ME4a LINE L1 -1353 4793 4584 1523 154 82 18 chr5 45334261 45334541 -157750991 - AluJo SINE Alu -14 298 1 495 0 0 0 chr5 45334957 45335012 -157750520 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2313 101 0 0 chr5 45335310 45335606 -157749926 - AluSx SINE Alu -16 296 1 25 0 0 0 chr5 45335658 45335683 -157749849 + AT_rich Low_complexity Low_complexity 1 25 0 1534 108 0 0 chr5 45335759 45335962 -157749570 - AluY SINE Alu -21 290 88 2262 96 7 7 chr5 45337139 45337440 -157748092 - AluSq SINE Alu -12 301 1 597 260 33 69 chr5 45337440 45337744 -157747788 - MER97c DNA MER1_type? -30 1060 768 2040 224 94 4 chr5 45338060 45338561 -157746971 - MER97b DNA MER1_type? -448 605 60 350 74 147 0 chr5 45338798 45338893 -157746639 + L1P4 LINE L1 5379 5487 -687 369 127 0 0 chr5 45339177 45339232 -157746300 - Alu SINE Alu -248 55 1 22 35 0 0 chr5 45339569 45339598 -157745934 + AT_rich Low_complexity Low_complexity 1 29 0 1970 153 0 0 chr5 45339598 45339892 -157745640 - AluSx SINE Alu -18 294 1 2176 256 51 47 chr5 45340014 45341569 -157743963 - L1ME2 LINE L1 -19 6145 4497 2844 136 23 21 chr5 45341672 45342099 -157743433 - MSTA LTR MaLR 0 428 1 226 353 26 33 chr5 45343632 45343785 -157741747 - MIR3 SINE MIR -23 185 34 308 283 8 25 chr5 45343820 45343940 -157741592 - HERV16 LTR ERVL -292 4704 4587 874 289 21 7 chr5 45343992 45344272 -157741260 - HERV16 LTR ERVL -4695 301 18 375 303 34 62 chr5 45344361 45344569 -157740963 - LTR16A LTR ERVL -216 234 33 402 108 0 0 chr5 45345213 45345278 -157740254 + (TG)n Simple_repeat Simple_repeat 2 66 0 434 220 152 40 chr5 45346322 45346645 -157738887 - HAL1b LINE L1 -26 1322 964 771 274 69 33 chr5 45346695 45347118 -157738414 - HAL1b LINE L1 -451 897 460 2121 132 58 28 chr5 45347118 45347482 -157738050 + THE1C LTR MaLR 1 375 0 2701 134 9 9 chr5 45347484 45347908 -157737624 + THE1C-int LTR MaLR 3 426 -1154 1221 175 57 39 chr5 45347947 45348227 -157737305 + THE1C LTR MaLR 91 375 0 2546 167 53 13 chr5 45349184 45349633 -157735899 + MLT1C LTR MaLR 1 467 0 26 30 0 0 chr5 45352093 45352126 -157733406 + AT_rich Low_complexity Low_complexity 1 33 0 5531 153 30 39 chr5 45352842 45353326 -157732206 - L1MA5A LINE L1 -8 6289 5802 240 35 0 0 chr5 45353326 45353355 -157732177 + (TATG)n Simple_repeat Simple_repeat 4 32 0 5531 153 30 39 chr5 45353355 45354490 -157731042 - L1MA5A LINE L1 -495 5802 4702 234 0 0 0 chr5 45354490 45354516 -157731016 + (TG)n Simple_repeat Simple_repeat 1 26 0 5531 153 30 39 chr5 45354516 45354996 -157730536 - L1MA5A LINE L1 -1595 4702 4219 5120 105 21 3 chr5 45355678 45356432 -157729100 - L1PA11 LINE L1 -1 6173 5406 396 297 159 47 chr5 45356451 45356791 -157728741 - LTR16C LTR ERVL 0 491 114 254 349 114 30 chr5 45357838 45357924 -157727608 - L2 LINE L2 -2 3270 3193 2758 88 0 6 chr5 45357924 45358286 -157727246 - THE1B LTR MaLR -2 362 3 254 349 114 30 chr5 45358286 45358791 -157726741 - L2 LINE L2 -79 3193 2587 22 56 0 0 chr5 45358850 45358886 -157726646 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 20 0 chr5 45360296 45360601 -157724931 - AluY SINE Alu 0 311 1 512 333 91 21 chr5 45360796 45361135 -157724397 - L3 LINE CR1 -171 1406 1044 23 68 0 0 chr5 45361331 45361375 -157724157 + AT_rich Low_complexity Low_complexity 1 44 0 180 176 0 0 chr5 45361382 45361416 -157724116 + T-rich Low_complexity Low_complexity 1 34 0 461 330 105 72 chr5 45361423 45362361 -157723171 - L2 LINE L2 -32 3240 2266 610 356 134 27 chr5 45362859 45363673 -157721859 - L3 LINE CR1 -248 1329 429 264 148 25 49 chr5 45363784 45363865 -157721667 + A-rich Low_complexity Low_complexity 4 82 0 413 266 144 21 chr5 45364392 45364719 -157720813 - L1ME4a LINE L1 -230 5891 5525 207 188 0 0 chr5 45364760 45364808 -157720724 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 372 300 9 27 chr5 45365053 45365163 -157720369 + L2 LINE L2 2636 2743 -571 249 312 128 28 chr5 45365468 45365609 -157719923 + L2 LINE L2 3118 3272 0 225 364 66 20 chr5 45366596 45366794 -157718738 + MIR SINE MIR 6 212 -50 205 271 14 57 chr5 45366916 45366986 -157718546 + L3 LINE CR1 317 383 -1194 335 91 0 18 chr5 45367422 45367477 -157718055 - MLT2A2 LTR ERVL 0 453 400 483 73 0 0 chr5 45367480 45367548 -157717984 + (TA)n Simple_repeat Simple_repeat 1 68 0 224 327 0 0 chr5 45367548 45367603 -157717929 + L2 LINE L2 3213 3267 -5 405 121 36 0 chr5 45367724 45367807 -157717725 + (TA)n Simple_repeat Simple_repeat 2 87 0 2624 86 70 3 chr5 45367812 45368186 -157717346 - MLT2A1 LTR ERVL -45 399 1 2001 151 0 0 chr5 45369245 45369550 -157715982 - AluSx SINE Alu -7 305 1 283 306 121 40 chr5 45369752 45369876 -157715656 + L2 LINE L2 3175 3308 -5 247 255 0 0 chr5 45369961 45370012 -157715520 + (CA)n Simple_repeat Simple_repeat 2 52 0 303 256 217 31 chr5 45370718 45370847 -157714685 - MIR SINE MIR -102 160 8 338 94 19 0 chr5 45370920 45370973 -157714559 - L1PA13 LINE L1 -4570 2217 2164 521 253 230 20 chr5 45370973 45371269 -157714263 - MER31B LTR ERV1 -108 358 1 251 286 48 0 chr5 45371535 45371598 -157713934 - MIR3 SINE MIR -13 195 130 22 0 0 0 chr5 45371817 45371839 -157713693 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 45372018 45372060 -157713472 + AT_rich Low_complexity Low_complexity 1 42 0 5346 130 9 14 chr5 45373458 45375396 -157710136 - L1PA15 LINE L1 -13 6152 4220 774 314 51 40 chr5 45376404 45376992 -157708540 - L2 LINE L2 -126 3187 2576 2322 268 106 20 chr5 45376992 45377749 -157707783 - L2 LINE L2 -1756 1558 737 274 320 0 0 chr5 45377834 45377912 -157707620 - L2 LINE L2 -2801 513 436 350 130 58 0 chr5 45378027 45378096 -157707436 - L1PA16 LINE L1 -6 6160 6088 1252 164 2 8 chr5 45378096 45378314 -157707218 - L1MC/D LINE L1 -585 5581 5386 * 9136 199 40 19 chr5 45378308 45380052 -157705480 - L1PA16 LINE L1 -2 6164 4458 1964 116 4 4 chr5 45380052 45380327 -157705205 + AluSx SINE Alu 1 275 -37 509 44 15 0 chr5 45380331 45380399 -157705133 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 9136 199 40 19 chr5 45380399 45381881 -157703651 - L1PA16 LINE L1 -1710 4456 2864 393 258 158 8 chr5 45382170 45382290 -157703242 - L2 LINE L2 0 3313 3176 369 282 43 17 chr5 45382474 45382591 -157702941 - MIR3 SINE MIR -49 159 40 221 152 43 0 chr5 45383788 45383834 -157701698 + T-rich Low_complexity Low_complexity 2 49 0 548 289 100 21 chr5 45384462 45384701 -157700831 - MIR SINE MIR -2 260 3 1762 171 61 3 chr5 45385239 45385584 -157699948 - MLT1A1 LTR MaLR 0 365 1 641 321 123 17 chr5 45386165 45386514 -157699018 + MLT1J2 LTR MaLR 58 443 -7 603 217 30 42 chr5 45386992 45387158 -157698374 + MLT1D LTR MaLR 1 164 -341 799 223 10 17 chr5 45387406 45387606 -157697926 + MLT1D LTR MaLR 208 401 -104 1268 212 111 55 chr5 45388066 45388206 -157697326 + L1ME2 LINE L1 5562 5693 -471 261 0 0 0 chr5 45388206 45388235 -157697297 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1828 117 4 18 chr5 45388240 45388521 -157697011 - AluSp SINE Alu -32 281 5 1268 212 111 55 chr5 45388521 45388851 -157696681 + L1ME2 LINE L1 5696 6065 -99 293 360 120 42 chr5 45390167 45390336 -157695196 + L3 LINE CR1 357 511 -1066 2344 127 16 24 chr5 45390336 45390714 -157694818 - THE1C LTR MaLR 0 375 1 293 360 120 42 chr5 45390714 45390952 -157694580 + L3 LINE CR1 511 796 -781 374 335 75 28 chr5 45391072 45391326 -157694206 + L3 LINE CR1 821 1086 -491 180 379 85 29 chr5 45392518 45392790 -157692742 + L2 LINE L2 2564 2850 -464 832 230 123 12 chr5 45393017 45393289 -157692243 - L1ME3A LINE L1 -282 5880 5581 1623 199 101 58 chr5 45393307 45393717 -157691815 + MLT1E2 LTR MaLR 120 511 -115 207 0 0 0 chr5 45393717 45393740 -157691792 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2067 125 0 0 chr5 45393749 45394044 -157691488 - AluSx SINE Alu -17 295 1 1623 199 101 58 chr5 45394044 45394106 -157691426 + MLT1E2 LTR MaLR 518 623 -3 569 267 67 0 chr5 45394108 45394288 -157691244 - L1ME LINE L1 -551 6013 5822 198 0 0 0 chr5 45394893 45394915 -157690617 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 1061 222 61 84 chr5 45395434 45396005 -157689527 - L1ME LINE L1 -4160 2380 1823 1144 195 158 17 chr5 45397835 45398132 -157687400 + MER2 DNA MER2_type 7 345 0 442 338 58 58 chr5 45398204 45398583 -157686949 - L1M4 LINE L1 -2162 3984 3606 1034 191 149 40 chr5 45398843 45399172 -157686360 + MLT1A1 LTR MaLR 1 365 0 1750 147 13 36 chr5 45402153 45402460 -157683072 - AluJo SINE Alu -12 300 1 2147 113 17 0 chr5 45402822 45403114 -157682418 + AluSq SINE Alu 4 300 -13 674 245 64 64 chr5 45403571 45403820 -157681712 + MIR SINE MIR 1 249 -13 1386 113 5 54 chr5 45404020 45404284 -157681248 - AluSq SINE Alu 0 327 75 189 250 45 0 chr5 45404469 45404513 -157681019 - MIR SINE MIR -118 144 99 1980 129 0 4 chr5 45405272 45405580 -157679952 - AluSc SINE Alu 0 307 1 274 324 39 29 chr5 45406781 45406883 -157678649 + L2 LINE L2 3196 3298 -15 1816 153 10 75 chr5 45407636 45408023 -157677509 + MLT1B LTR MaLR 29 390 0 185 389 0 0 chr5 45408899 45408953 -157676579 - MIR SINE MIR -156 106 53 240 35 0 0 chr5 45408970 45408999 -157676533 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1499 207 66 16 chr5 45411957 45412320 -157673212 + MLT1D LTR MaLR 1 381 -124 2248 98 3 13 chr5 45412593 45412898 -157672634 - AluSg SINE Alu -8 302 1 260 223 148 94 chr5 45413060 45413200 -157672332 - LTR33A LTR ERVL 0 523 366 4431 49 16 0 chr5 45413200 45413778 -157671754 + L1PA5 LINE L1 5578 6164 0 260 223 148 94 chr5 45413778 45413838 -157671694 - LTR33A LTR ERVL -157 366 311 * 537 305 75 0 chr5 45413827 45414014 -157671518 - LTR33A LTR ERVL -316 207 7 205 241 86 0 chr5 45415638 45415696 -157669836 - L2 LINE L2 -87 3226 3164 947 211 11 79 chr5 45415710 45415990 -157669542 + MLT1B LTR MaLR 1 261 -129 533 154 0 0 chr5 45415994 45416072 -157669460 + AluJb SINE Alu 7 84 -228 13256 93 10 0 chr5 45416072 45417892 -157667640 + L1PA5 LINE L1 1 1839 -4307 10902 46 5 0 chr5 45417896 45420012 -157665520 + L1PA5 LINE L1 4021 6146 -8 1052 188 4 52 chr5 45420042 45420292 -157665240 + AluJb SINE Alu 75 312 0 657 201 60 0 chr5 45420302 45420436 -157665096 + MLT1B LTR MaLR 249 390 0 213 354 13 0 chr5 45422236 45422315 -157663217 + MIR SINE MIR 72 151 -57 21 71 0 0 chr5 45422441 45422483 -157663049 + AT_rich Low_complexity Low_complexity 1 42 0 255 290 32 58 chr5 45423082 45423237 -157662295 + L1MEd LINE L1 1100 1250 -4869 244 313 42 0 chr5 45423208 45423304 -157662228 + L1PBa LINE L1 1314 1413 -1077 * 226 259 0 0 chr5 45423392 45423446 -157662086 + L1PBa LINE L1 1690 1743 -4387 2117 103 0 58 chr5 45423660 45423971 -157661561 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr5 45423974 45423997 -157661535 + AT_rich Low_complexity Low_complexity 1 23 0 1102 162 14 48 chr5 45424305 45424515 -157661017 + AluJb SINE Alu 27 229 -83 6315 28 0 0 chr5 45424656 45425407 -157660125 - L1PA3 LINE L1 -876 5270 4520 7448 24 2 6 chr5 45425407 45426287 -157659245 + L1PA3 LINE L1 5273 6155 0 2052 135 0 0 chr5 45426405 45426687 -157658845 + AluSx SINE Alu 1 282 -30 243 0 0 0 chr5 45426689 45426716 -157658816 + (TC)n Simple_repeat Simple_repeat 2 28 0 342 0 0 0 chr5 45426716 45426754 -157658778 + (CA)n Simple_repeat Simple_repeat 1 38 0 2213 112 3 3 chr5 45427363 45427675 -157657857 + AluSx SINE Alu 1 312 0 369 277 128 14 chr5 45428364 45428512 -157657020 + MIR SINE MIR 85 249 -13 743 174 30 0 chr5 45429565 45429697 -157655835 + AluJo SINE Alu 1 136 -176 269 292 5 108 chr5 45430424 45430609 -157654923 + MIR SINE MIR 69 234 -28 8619 138 19 11 chr5 45430749 45432158 -157653374 - Tigger1 DNA MER2_type -998 1420 1 383 61 0 0 chr5 45432300 45432349 -157653183 - Tigger1 DNA MER2_type -2004 414 366 296 383 0 7 chr5 45432885 45433034 -157652498 - MIR SINE MIR -49 213 66 255 31 0 0 chr5 45433063 45433095 -157652437 + (TG)n Simple_repeat Simple_repeat 2 33 0 2271 95 3 3 chr5 45435115 45435420 -157650112 + AluSc SINE Alu 2 306 -3 194 162 27 122 chr5 45435727 45435801 -157649731 - L2 LINE L2 -1280 2034 1968 370 73 0 0 chr5 45436180 45436235 -157649297 - MER73 LTR ERVL -589 55 1 1459 247 25 11 chr5 45436235 45436595 -157648937 + L1MC4 LINE L1 6691 7055 -987 637 253 118 19 chr5 45436607 45437174 -157648358 + L1MC4 LINE L1 7160 7710 -98 1712 156 75 28 chr5 45438659 45439017 -157646515 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 45439122 45439145 -157646387 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 45439565 45439592 -157645940 + AT_rich Low_complexity Low_complexity 1 27 0 874 294 124 21 chr5 45439855 45440274 -157645258 - HERV16 LTR ERVL -4131 865 404 876 240 35 143 chr5 45440652 45441136 -157644396 - LTR16A1 LTR ERVL 0 457 26 310 298 18 9 chr5 45441143 45441257 -157644275 + MER94 DNA DNA 20 134 0 337 175 194 0 chr5 45442240 45442291 -157643241 - L1MA10 LINE L1 -8 6326 6276 428 231 36 98 chr5 45442291 45442568 -157642964 - L1ME1 LINE L1 -67 6099 5840 26 50 0 0 chr5 45442701 45442741 -157642791 + AT_rich Low_complexity Low_complexity 1 40 0 1197 227 14 15 chr5 45442844 45443313 -157642219 + L1ME LINE L1 5077 5545 -621 434 351 105 61 chr5 45443853 45444652 -157640880 + L2 LINE L2 2430 3272 0 1820 152 71 0 chr5 45444826 45445149 -157640383 + MER7A DNA MER2_type 2 345 -1 352 276 68 23 chr5 45446370 45446591 -157638941 - L1MA8 LINE L1 -4 6287 6057 2155 120 0 13 chr5 45447312 45447628 -157637904 + AluSx SINE Alu 1 312 0 249 279 110 55 chr5 45447653 45447961 -157637571 + L1MEd LINE L1 930 1254 -4865 2297 128 19 3 chr5 45448141 45448488 -157637044 - L1PB1 LINE L1 -5 6146 5791 267 31 0 0 chr5 45448488 45448520 -157637012 + (TG)n Simple_repeat Simple_repeat 2 33 0 2297 128 19 3 chr5 45448520 45448531 -157637001 - L1PB1 LINE L1 -360 5791 5782 214 200 0 29 chr5 45448531 45448601 -157636931 + (TA)n Simple_repeat Simple_repeat 1 68 0 2434 105 20 26 chr5 45448601 45448709 -157636823 - L1PB1 LINE L1 -360 5791 5684 1982 132 66 33 chr5 45448709 45449072 -157636460 - THE1C LTR MaLR 0 375 1 2434 105 20 26 chr5 45449072 45449354 -157636178 - L1PB1 LINE L1 -467 5684 5403 187 430 20 7 chr5 45450028 45450177 -157635355 - L2 LINE L2 -188 3084 2934 21 36 0 0 chr5 45450244 45450272 -157635260 + AT_rich Low_complexity Low_complexity 1 28 0 187 313 31 0 chr5 45450300 45450364 -157635168 + L3b LINE CR1 1429 1494 -89 959 197 138 84 chr5 45450410 45450780 -157634752 - MLT1B LTR MaLR 0 390 1 30 77 0 0 chr5 45451581 45451646 -157633886 + AT_rich Low_complexity Low_complexity 1 65 0 491 227 153 7 chr5 45452202 45452352 -157633180 + Charlie1 DNA MER1_type 7 178 -2583 * 1799 222 32 7 chr5 45452346 45452783 -157632749 + Charlie1 DNA MER1_type 2055 2502 -259 25 31 0 0 chr5 45453106 45453138 -157632394 + AT_rich Low_complexity Low_complexity 1 32 0 1960 107 64 4 chr5 45453229 45453510 -157632022 - AluSq SINE Alu -15 298 1 185 308 0 55 chr5 45455357 45455448 -157630084 + L2 LINE L2 2932 3017 -255 2257 100 3 0 chr5 45455810 45456110 -157629422 + AluSc SINE Alu 1 301 -8 193 238 24 0 chr5 45456274 45456316 -157629216 - MIR3 SINE MIR -50 158 116 183 42 0 0 chr5 45456389 45456413 -157629119 + (CA)n Simple_repeat Simple_repeat 2 25 0 2316 102 7 0 chr5 45458215 45458520 -157627012 + AluSx SINE Alu 1 307 -5 441 0 0 0 chr5 45458565 45458614 -157626918 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 233 221 0 128 chr5 45458974 45459060 -157626472 - MIR SINE MIR -118 144 70 219 69 0 0 chr5 45459133 45459162 -157626370 + (CA)n Simple_repeat Simple_repeat 2 30 0 287 271 0 0 chr5 45459322 45459392 -157626140 + MER112 DNA MER1_type 179 248 -12 868 250 18 5 chr5 45459587 45459811 -157625721 + L1PA10 LINE L1 9 235 -5640 4655 220 1 32 chr5 45459812 45461035 -157624497 + L1PA10 LINE L1 356 2326 -4135 18361 144 7 13 chr5 45461035 45464952 -157620580 + L1PA10 LINE L1 2528 6482 -1 2441 123 17 3 chr5 45465496 45465855 -157619677 + THE1B LTR MaLR 1 364 0 183 129 0 0 chr5 45465895 45465926 -157619606 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr5 45465926 45465955 -157619577 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 45466805 45466828 -157618704 + AT_rich Low_complexity Low_complexity 1 23 0 228 237 15 30 chr5 45467167 45467298 -157618234 + (TA)n Simple_repeat Simple_repeat 1 129 0 1129 181 157 35 chr5 45468351 45468701 -157616831 + MSTB LTR MaLR 22 426 0 236 340 113 16 chr5 45469265 45469450 -157616082 + L2 LINE L2 2554 2756 -558 * 979 265 13 4 chr5 45469449 45469679 -157615853 - MIR SINE MIR -29 233 2 727 361 89 11 chr5 45469679 45470186 -157615346 + L2 LINE L2 2722 3269 -44 28 0 0 0 chr5 45470204 45470232 -157615300 + AT_rich Low_complexity Low_complexity 1 28 0 26 74 0 0 chr5 45470283 45470337 -157615195 + AT_rich Low_complexity Low_complexity 1 54 0 396 273 224 0 chr5 45471248 45471391 -157614141 + MER5A DNA MER1_type 9 183 -6 660 299 80 34 chr5 45472276 45472510 -157613022 - MLT1I LTR MaLR -19 390 135 294 29 0 0 chr5 45472510 45472545 -157612987 + (TA)n Simple_repeat Simple_repeat 1 35 0 660 299 80 34 chr5 45472545 45472634 -157612898 - MLT1I LTR MaLR -274 135 52 233 397 30 15 chr5 45473567 45473698 -157611834 + MIR3 SINE MIR 40 172 -36 2401 87 0 3 chr5 45476403 45476714 -157608818 - AluY SINE Alu -1 310 1 1685 239 117 46 chr5 45477944 45478621 -157606911 + MER50 LTR ERV1 10 734 0 299 256 105 0 chr5 45480025 45480111 -157605421 + MLT1I LTR MaLR 311 405 -4 346 341 49 40 chr5 45480208 45480431 -157605101 - L2 LINE L2 -19 3253 3029 284 113 75 0 chr5 45480432 45480485 -157605047 - MLT2A1 LTR ERVL 0 444 388 341 155 54 0 chr5 45480488 45480617 -157604915 + (TA)n Simple_repeat Simple_repeat 1 136 0 2596 89 45 11 chr5 45480619 45481000 -157604532 - MLT2A1 LTR ERVL -48 396 3 19737 79 8 5 chr5 45481002 45484716 -157600816 - HERVL-A1 LTR ERVL 0 5654 1868 327 108 50 36 chr5 45484716 45484855 -157600677 + (TA)n Simple_repeat Simple_repeat 1 141 0 272 192 62 27 chr5 45484857 45485003 -157600529 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 359 124 65 20 chr5 45485003 45485156 -157600376 + (TA)n Simple_repeat Simple_repeat 2 161 0 2522 118 46 8 chr5 45485156 45485545 -157599987 - MLT2A1 LTR ERVL -40 404 1 327 304 0 36 chr5 45485856 45485968 -157599564 + MER5A DNA MER1_type 69 176 -13 2449 104 30 3 chr5 45486241 45486606 -157598926 - THE1C LTR MaLR 0 375 1 2253 158 54 15 chr5 45488242 45488652 -157596880 + MSTB LTR MaLR 1 426 0 1900 187 0 3 chr5 45488652 45488999 -157596533 + MSTB-int LTR MaLR 1 346 -1305 1392 107 0 0 chr5 45489001 45489198 -157596334 + MER107 DNA MER1_type 1 197 0 6833 195 22 15 chr5 45489199 45489252 -157596280 + MSTB-int LTR MaLR 349 400 -1251 2162 113 0 3 chr5 45489252 45489536 -157595996 + AluSq SINE Alu 13 295 -18 6833 195 22 15 chr5 45489536 45490770 -157594762 + MSTB-int LTR MaLR 400 1645 -6 2254 189 19 12 chr5 45490776 45491199 -157594333 + MSTB LTR MaLR 1 426 0 14430 145 29 18 chr5 45492305 45494753 -157590779 + Tigger2 DNA MER2_type 1 2474 -244 353 273 47 16 chr5 45496119 45496247 -157589285 - LTR33A LTR ERVL 0 523 392 312 269 52 45 chr5 45496533 45496667 -157588865 - LTR50 LTR ERVL -636 159 25 2335 80 0 3 chr5 45496768 45497079 -157588453 - AluY SINE Alu -1 310 1 2406 112 60 5 chr5 45498597 45498980 -157586552 + MLT2A1 LTR ERVL 1 404 -40 316 211 105 0 chr5 45498981 45499057 -157586475 - L1MC4 LINE L1 -1350 6692 6609 218 59 78 20 chr5 45499057 45499108 -157586424 + (TA)n Simple_repeat Simple_repeat 1 54 0 583 115 29 23 chr5 45499111 45499285 -157586247 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 446 140 10 30 chr5 45499288 45499388 -157586144 + (TA)n Simple_repeat Simple_repeat 2 99 0 42 58 0 29 chr5 45500106 45500209 -157585323 + AT_rich Low_complexity Low_complexity 1 100 0 763 53 18 44 chr5 45500945 45501059 -157584473 + AluY SINE Alu 96 206 -105 667 296 83 37 chr5 45502009 45502243 -157583289 - MLT1I LTR MaLR -19 390 135 603 0 0 0 chr5 45502243 45502310 -157583222 + (TA)n Simple_repeat Simple_repeat 2 68 0 667 296 83 37 chr5 45502310 45502399 -157583133 - MLT1I LTR MaLR -274 135 52 1457 181 70 24 chr5 45502785 45503083 -157582449 + MER2 DNA MER2_type 34 345 0 231 208 0 0 chr5 45503083 45503128 -157582404 + MLT2B1 LTR ERVL 474 518 -2 2461 225 31 54 chr5 45503133 45503805 -157581727 + MLT-int LTR MaLR 2 658 -1077 463 299 7 29 chr5 45503899 45504036 -157581496 + MLT-int LTR MaLR 1303 1436 -299 2788 163 29 36 chr5 45504036 45504624 -157580908 - L1PB4 LINE L1 -1 6155 5572 1177 184 33 8 chr5 45504632 45504991 -157580541 - L1PB4 LINE L1 -748 5398 5083 * 1522 197 11 4 chr5 45504985 45505264 -157580268 + MLT1A1-int LTR MaLR 1448 1728 -7 1295 204 12 23 chr5 45505316 45505631 -157579901 + MLT1A1 LTR MaLR 21 365 0 234 334 14 24 chr5 45505645 45505744 -157579788 + MER5A DNA MER1_type 74 172 -6 309 291 82 51 chr5 45506081 45506239 -157579293 - L1ME4a LINE L1 -197 5924 5762 256 330 62 6 chr5 45506301 45506477 -157579055 + L1M4 LINE L1 5368 5553 -625 253 273 27 27 chr5 45506934 45507044 -157578488 - HAL1 LINE L1 -145 2362 2253 439 319 77 93 chr5 45509184 45510142 -157575390 - L2 LINE L2 -1480 1834 892 330 310 121 0 chr5 45511215 45511331 -157574201 - L2 LINE L2 0 3313 3184 260 284 26 116 chr5 45511400 45511478 -157574054 - MIR SINE MIR -59 203 120 1465 178 75 0 chr5 45511478 45511759 -157573773 + AluJo SINE Alu 1 302 0 260 284 26 116 chr5 45511759 45511870 -157573662 - MIR SINE MIR -142 120 31 194 327 53 44 chr5 45513181 45513294 -157572238 - MIR3 SINE MIR -26 182 69 297 197 0 33 chr5 45513480 45513541 -157571991 - MIR3 SINE MIR -49 159 101 220 292 216 18 chr5 45513917 45514088 -157571444 + L2 LINE L2 2434 2638 -676 337 242 75 33 chr5 45514863 45514983 -157570549 + MIR SINE MIR 9 133 -129 440 315 183 0 chr5 45515007 45515220 -157570312 - MIR SINE MIR -2 260 9 1535 167 36 42 chr5 45515347 45515653 -157569879 + AluJb SINE Alu 1 304 -8 193 250 16 31 chr5 45515878 45515942 -157569590 - MIR SINE MIR -93 169 107 2140 241 70 42 chr5 45517396 45518035 -157567497 + MER21B LTR ERV1 147 803 -60 235 238 36 36 chr5 45518717 45518801 -157566731 + GA-rich Low_complexity Low_complexity 3 86 0 189 303 0 30 chr5 45518855 45518921 -157566611 - MIR SINE MIR -100 162 99 206 333 12 37 chr5 45519430 45519511 -157566021 - L2 LINE L2 -1 3312 3234 3802 105 52 12 chr5 45519882 45520475 -157565057 - L1PB1 LINE L1 -1 6150 5534 11576 232 49 32 chr5 45520475 45521321 -157564211 - L1M2 LINE L1 -655 5721 4891 275 64 0 21 chr5 45521321 45521368 -157564164 + (TA)n Simple_repeat Simple_repeat 2 47 0 11576 232 49 32 chr5 45521368 45522573 -157562959 - L1M2 LINE L1 -1485 4891 3708 2191 85 0 3 chr5 45522573 45522855 -157562677 - AluY SINE Alu -11 300 20 11576 232 49 32 chr5 45522855 45523783 -157561749 - L1M2 LINE L1 -2668 3708 2797 1828 135 40 0 chr5 45523783 45524057 -157561475 + AluSq SINE Alu 2 286 -27 333 0 0 0 chr5 45524061 45524098 -157561434 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 11576 232 49 32 chr5 45524098 45526927 -157558605 - L1M2 LINE L1 -3581 2795 14 208 213 43 21 chr5 45526963 45527010 -157558522 + MIR3 SINE MIR 116 163 -45 * 408 326 74 37 chr5 45527007 45527249 -157558283 - MIR SINE MIR 0 262 12 25 65 0 0 chr5 45528006 45528052 -157557480 + AT_rich Low_complexity Low_complexity 1 46 0 1986 233 52 22 chr5 45528389 45528891 -157556641 - LTR53 LTR ERVL -2 517 1 23 33 0 0 chr5 45529000 45529030 -157556502 + AT_rich Low_complexity Low_complexity 1 30 0 9505 40 1 70 chr5 45529113 45530631 -157554901 - L1PA5 LINE L1 -607 5547 4135 4980 39 0 0 chr5 45530631 45531222 -157554310 + L1PA5 LINE L1 5560 6151 -3 1358 271 95 45 chr5 45531937 45532026 -157553506 + L1ME LINE L1 1315 1398 -4998 189 74 0 0 chr5 45532026 45532053 -157553479 + (CA)n Simple_repeat Simple_repeat 2 28 0 1358 271 95 45 chr5 45532053 45532869 -157552663 + L1ME LINE L1 1398 2281 -4115 1995 106 3 11 chr5 45532869 45533189 -157552343 + AluSc SINE Alu 2 319 0 1358 271 95 45 chr5 45533189 45533315 -157552217 + L1ME LINE L1 2281 2399 -3997 * 1835 269 67 12 chr5 45533307 45533575 -157551957 + L1ME LINE L1 2301 2553 -3662 312 27 0 0 chr5 45533575 45533612 -157551920 + (CA)n Simple_repeat Simple_repeat 2 38 0 1835 269 67 12 chr5 45533612 45534076 -157551456 + L1ME LINE L1 2553 3073 -3142 861 69 9 0 chr5 45534079 45534226 -157551306 + AluY SINE Alu 175 322 0 323 291 24 20 chr5 45534227 45534478 -157551054 + L1ME LINE L1 3076 3327 -2888 1115 231 62 52 chr5 45534652 45535038 -157550494 + MLT1B LTR MaLR 1 390 0 3114 198 53 4 chr5 45535038 45535721 -157549811 + MLT1B-int LTR MaLR 1 716 -655 744 224 149 13 chr5 45536086 45536400 -157549132 + MLT1B-int LTR MaLR 1308 1735 0 1396 197 39 75 chr5 45536400 45536795 -157548737 + MLT1B LTR MaLR 1 365 0 851 230 22 55 chr5 45536795 45537069 -157548463 + L1ME LINE L1 4584 4848 -1367 943 450 54 9 chr5 45537070 45537403 -157548129 - MLT1A1 LTR MaLR -1 364 17 1652 239 61 76 chr5 45537417 45538471 -157547061 + L1ME LINE L1 4846 5888 -347 * 4106 166 18 6 chr5 45538467 45539602 -157545930 - L1PA16 LINE L1 -248 5918 4773 1417 206 64 87 chr5 45539602 45540073 -157545459 - MER66A LTR ERV1 0 478 97 3526 221 17 14 chr5 45540140 45541025 -157544507 - L1 LINE L1 -1371 4775 3888 1937 143 29 0 chr5 45541025 45541305 -157544227 - AluSx SINE Alu -24 288 1 2162 96 16 3 chr5 45541316 45541619 -157543913 - AluY SINE Alu -4 307 1 1404 250 26 11 chr5 45541629 45542097 -157543435 - L1PA16 LINE L1 -2547 3599 3125 1309 177 69 134 chr5 45542776 45542931 -157542601 + MSTD LTR MaLR 6 169 -227 2081 123 0 0 chr5 45542931 45543231 -157542301 + AluSg1 SINE Alu 1 300 -9 1309 177 69 134 chr5 45543231 45543493 -157542039 + MSTD LTR MaLR 169 396 0 279 305 39 29 chr5 45543640 45543777 -157541755 - MIR SINE MIR -13 195 58 182 62 31 0 chr5 45543903 45543935 -157541597 + (TTTTTG)n Simple_repeat Simple_repeat 1 33 0 1213 188 58 0 chr5 45544223 45544446 -157541086 + MER46A DNA MER2_type 1 236 0 2905 83 76 102 chr5 45544644 45545172 -157540360 - THE1B-int LTR MaLR -1066 514 1 2280 137 14 14 chr5 45545172 45545536 -157539996 - THE1B LTR MaLR 0 364 1 352 122 171 6 chr5 45545640 45545743 -157539789 - L1MA8 LINE L1 -81 6231 6113 * 447 135 153 5 chr5 45545741 45545847 -157539685 + L1MA8 LINE L1 6180 6286 -5 870 257 101 3 chr5 45545877 45546165 -157539367 - Charlie1 DNA MER1_type -268 2493 2178 333 47 0 0 chr5 45546167 45546210 -157539322 + (CA)n Simple_repeat Simple_repeat 2 44 0 246 211 11 95 chr5 45546295 45546390 -157539142 - MER112 DNA MER1_type -173 87 1 30 0 0 0 chr5 45546448 45546478 -157539054 + AT_rich Low_complexity Low_complexity 1 30 0 274 290 186 8 chr5 45546497 45546621 -157538911 + MLT1J2 LTR MaLR 1 146 -304 282 187 41 6 chr5 45546647 45546799 -157538733 + CT-rich Low_complexity Low_complexity 1 157 0 384 276 99 11 chr5 45547049 45547230 -157538302 + L1ME3A LINE L1 5767 5963 -207 715 163 0 57 chr5 45548093 45548234 -157537298 + AluJo/FLAM SINE Alu 1 133 -169 295 163 0 0 chr5 45548234 45548283 -157537249 + AluSg/x SINE Alu 136 184 -118 1249 135 14 24 chr5 45548287 45548495 -157537037 + AluSp SINE Alu 101 306 -7 279 0 0 0 chr5 45548495 45548526 -157537006 + (GA)n Simple_repeat Simple_repeat 1 31 0 369 43 0 0 chr5 45548537 45548584 -157536948 + (AATAG)n Simple_repeat Simple_repeat 1 47 0 414 142 43 21 chr5 45548640 45548693 -157536839 + GA-rich Low_complexity Low_complexity 2 52 -93 225 0 0 0 chr5 45548693 45548718 -157536814 + (TG)n Simple_repeat Simple_repeat 1 25 0 414 142 43 21 chr5 45548718 45548805 -157536727 + GA-rich Low_complexity Low_complexity 52 145 0 23 33 0 0 chr5 45549374 45549404 -157536128 + AT_rich Low_complexity Low_complexity 1 30 0 253 113 0 38 chr5 45549493 45549546 -157535986 + (GAA)n Simple_repeat Simple_repeat 1 51 0 229 255 184 0 chr5 45549567 45549665 -157535867 - MIR SINE MIR -24 238 123 453 19 0 0 chr5 45549788 45549842 -157535690 + (CA)n Simple_repeat Simple_repeat 2 55 0 244 263 13 39 chr5 45549991 45550082 -157535450 - MER5A DNA MER1_type -11 178 79 203 239 0 60 chr5 45550252 45550319 -157535213 - L2 LINE L2 -1 3271 3209 258 323 70 38 chr5 45550506 45550664 -157534868 - MIR SINE MIR -36 226 64 1137 117 6 6 chr5 45551255 45551435 -157534097 - L1MA3 LINE L1 -468 5837 5658 1729 184 0 25 chr5 45551871 45552191 -157533341 + AluJb SINE Alu 1 312 0 198 354 30 56 chr5 45553313 45553511 -157532021 - L2 LINE L2 -553 2761 2569 182 353 163 32 chr5 45554183 45554983 -157530549 - L2 LINE L2 -849 2465 1562 1266 234 21 14 chr5 45555702 45556038 -157529494 + MSTD LTR MaLR 1 395 -1 284 306 82 41 chr5 45556334 45556481 -157529051 - MIR SINE MIR -41 221 69 1408 122 10 5 chr5 45556534 45556739 -157528793 - AluSc SINE Alu -7 302 97 400 335 141 15 chr5 45557228 45557434 -157528098 + MIR SINE MIR 26 257 -5 1712 230 71 9 chr5 45558661 45559096 -157526436 - MLT1C LTR MaLR 0 467 6 218 321 37 0 chr5 45559099 45559180 -157526352 + MIR SINE MIR 176 259 -3 430 152 0 25 chr5 45559948 45560027 -157525505 + L1MB1 LINE L1 5798 5874 -294 195 100 0 0 chr5 45560284 45560314 -157525218 + (T)n Simple_repeat Simple_repeat 1 30 0 1853 199 58 12 chr5 45560706 45561118 -157524414 + MSTB1 LTR MaLR 1 431 -1 26 0 0 0 chr5 45561188 45561214 -157524318 + AT_rich Low_complexity Low_complexity 1 26 0 4534 109 11 48 chr5 45563418 45564132 -157521400 + LTR12 LTR ERV1 1 688 0 23 54 0 0 chr5 45564252 45564289 -157521243 + AT_rich Low_complexity Low_complexity 1 37 0 1225 78 0 6 chr5 45564452 45564618 -157520914 + L1PA4 LINE L1 5970 6134 -21 1051 31 0 0 chr5 45565507 45565634 -157519898 - L1PA5 LINE L1 0 6154 6028 247 241 19 0 chr5 45565820 45565874 -157519658 - MER5B DNA MER1_type -1 177 123 688 213 119 0 chr5 45565880 45566040 -157519492 + MLT2B1 LTR ERVL 1 179 -341 717 216 11 60 chr5 45566253 45566438 -157519094 + MER5B DNA MER1_type 3 178 0 205 414 0 0 chr5 45566440 45566527 -157519005 - MIR3 SINE MIR -50 158 72 304 281 65 54 chr5 45566926 45567111 -157518421 + LTR16C LTR ERVL 305 491 0 536 335 89 58 chr5 45568000 45568456 -157517076 - L2 LINE L2 -1 3312 2840 2268 101 3 0 chr5 45568456 45568752 -157516780 + AluSq SINE Alu 3 299 -14 536 335 89 58 chr5 45568752 45568928 -157516604 - L2 LINE L2 -473 2840 2671 840 228 140 19 chr5 45568992 45569299 -157516233 - LTR37A LTR ERV1 -50 376 33 2887 116 16 5 chr5 45570047 45570496 -157515036 + L1PA13 LINE L1 5708 6161 -2 1261 237 124 41 chr5 45572183 45572453 -157513079 + MLT2F LTR ERVL 1 247 -416 504 0 0 0 chr5 45572453 45572509 -157513023 + (TG)n Simple_repeat Simple_repeat 2 57 0 1261 237 124 41 chr5 45572509 45572758 -157512774 + MLT2F LTR ERVL 247 609 -54 230 224 0 0 chr5 45572801 45572850 -157512682 + MLT2F LTR ERVL 615 663 0 832 243 79 16 chr5 45573574 45573879 -157511653 - MER33 DNA MER1_type 0 324 1 392 333 43 29 chr5 45574668 45574802 -157510730 - MIR SINE MIR -1 261 121 2345 100 0 0 chr5 45574802 45575102 -157510430 + AluSg SINE Alu 1 300 -10 392 333 43 29 chr5 45575102 45575174 -157510358 - MIR SINE MIR -141 121 52 1236 207 73 50 chr5 45575313 45575670 -157509862 - MLT1A1 LTR MaLR 0 365 1 450 258 65 38 chr5 45575697 45575883 -157509649 + MLT1J LTR MaLR 68 258 -253 207 273 55 0 chr5 45576040 45576095 -157509437 - MIR SINE MIR -87 175 118 180 317 50 0 chr5 45576646 45576706 -157508826 + L3 LINE CR1 1403 1465 -112 346 339 81 6 chr5 45577241 45577415 -157508117 - MIR SINE MIR -56 206 20 630 102 0 0 chr5 45578417 45578505 -157507027 + AluSg SINE Alu 1 88 -222 603 335 50 48 chr5 45579165 45579695 -157505837 + L2 LINE L2 2726 3258 -55 350 183 158 24 chr5 45579708 45579790 -157505742 + MSTD LTR MaLR 1 93 -335 832 206 146 73 chr5 45579969 45580216 -157505316 + MSTD LTR MaLR 108 394 -2 6932 220 68 32 chr5 45580218 45581893 -157503639 + MSTD-int LTR MaLR 1 1735 0 865 217 48 14 chr5 45581919 45582186 -157503346 + MSTD LTR MaLR 76 383 -5 237 257 54 27 chr5 45583976 45584050 -157501482 + MER81 DNA DNA 39 114 0 200 329 112 7 chr5 45584210 45584362 -157501170 - MIR SINE MIR -11 251 84 2306 66 0 60 chr5 45585018 45585335 -157500197 - AluSx SINE Alu -14 298 1 588 273 169 43 chr5 45586032 45586358 -157499174 + MLT1J2 LTR MaLR 69 435 -15 403 357 126 36 chr5 45586510 45586843 -157498689 + L2 LINE L2 2906 3268 -4 1655 214 43 0 chr5 45587145 45587495 -157498037 + MLT1A1 LTR MaLR 1 365 0 2332 234 70 19 chr5 45588042 45588252 -157497280 - MLT1F1 LTR MaLR 0 567 369 2322 229 33 52 chr5 45588252 45588951 -157496581 - MER76 LTR ERV -2 686 1 2332 234 70 19 chr5 45588951 45589279 -157496253 - MLT1F1 LTR MaLR -198 369 1 280 337 56 0 chr5 45590372 45590461 -157495071 + L2 LINE L2 3137 3230 -42 24 0 0 0 chr5 45590684 45590708 -157494824 + AT_rich Low_complexity Low_complexity 1 24 0 310 293 141 54 chr5 45590783 45591025 -157494507 - L2 LINE L2 -36 3277 3015 1138 142 0 12 chr5 45591219 45591388 -157494144 - FRAM SINE Alu -11 165 1 253 274 39 49 chr5 45591589 45591691 -157493841 + L1MDa LINE L1 130 230 -6310 2074 239 44 53 chr5 45592118 45592144 -157493388 + L1MDa LINE L1 861 886 -5657 1523 221 29 32 chr5 45592144 45592519 -157493013 - MLT1A2 LTR MaLR 0 374 1 2074 239 44 53 chr5 45592519 45592910 -157492622 + L1MDa LINE L1 886 1272 -5271 270 0 0 0 chr5 45592910 45592940 -157492592 + (TA)n Simple_repeat Simple_repeat 1 30 0 2074 239 44 53 chr5 45592940 45593223 -157492309 + L1MDa LINE L1 1272 1556 -4987 4513 177 38 9 chr5 45593259 45593558 -157491974 + L1MB3 LINE L1 5167 5456 -727 180 0 0 0 chr5 45593558 45593578 -157491954 + (CA)n Simple_repeat Simple_repeat 1 20 0 4513 177 38 9 chr5 45593578 45594254 -157491278 + L1MB3 LINE L1 5456 6172 -11 2811 250 85 16 chr5 45594273 45595650 -157489882 + L1MDa LINE L1 1585 3055 -3485 1039 98 35 29 chr5 45595650 45595823 -157489709 + L1MA1 LINE L1 5881 6054 -248 231 281 0 0 chr5 45595818 45595875 -157489657 + L1MDa LINE L1 3088 3144 -3396 * 816 261 19 0 chr5 45595915 45596126 -157489406 + L1MDa LINE L1 4404 4618 -1922 807 235 166 11 chr5 45596120 45596221 -157489311 - L1MD2 LINE L1 -104 6255 6171 * 192 40 0 0 chr5 45596221 45596246 -157489286 + (TG)n Simple_repeat Simple_repeat 2 26 0 807 235 166 11 chr5 45596246 45596421 -157489111 - L1MD2 LINE L1 -188 6171 5936 495 108 14 5 chr5 45596421 45596559 -157488973 + MER4A-int LTR ERV1 603 807 -5791 360 43 0 0 chr5 45596576 45596622 -157488910 + (CA)n Simple_repeat Simple_repeat 1 46 0 269 189 0 38 chr5 45596691 45596744 -157488788 + LTR49 LTR ERV1 263 313 -282 6448 110 34 48 chr5 45596744 45597903 -157487629 + MER4A-int LTR ERV1 503 1448 -3567 1972 148 0 7 chr5 45597903 45598206 -157487326 - AluSq SINE Alu -11 302 2 6448 110 34 48 chr5 45598206 45598406 -157487126 + MER4A-int LTR ERV1 1448 1649 -3366 1227 153 127 0 chr5 45598407 45598635 -157486897 - LTR8 LTR ERV1 -434 257 1 3605 114 85 17 chr5 45598635 45599147 -157486385 + MER4A-int LTR ERV1 2737 3416 -3182 198 71 0 0 chr5 45599147 45599175 -157486357 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3605 114 85 17 chr5 45599175 45599466 -157486066 + MER4A-int LTR ERV1 3416 3686 -2912 * 15660 110 59 19 chr5 45599460 45600245 -157485287 + MER4A-int LTR ERV1 3837 4589 -2009 2333 82 7 0 chr5 45600245 45600537 -157484995 - AluY SINE Alu -15 296 3 15660 110 59 19 chr5 45600537 45602406 -157483126 + MER4A-int LTR ERV1 4589 6596 -2 525 153 20 20 chr5 45602410 45602508 -157483024 + MER4A LTR ERV1 1 98 -566 1682 139 11 78 chr5 45602508 45602878 -157482654 + MER4A LTR ERV1 261 664 0 201 365 84 28 chr5 45602931 45603180 -157482352 - L2 LINE L2 -1022 2292 2030 454 250 109 68 chr5 45603769 45604017 -157481515 - MIR SINE MIR -1 261 4 899 269 150 37 chr5 45604841 45605302 -157480230 - LTR33A LTR ERVL -9 514 2 224 239 0 0 chr5 45606073 45606119 -157479413 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 893 291 12 53 chr5 45606129 45606448 -157479084 - MER93a LTR ERV1 -4 398 93 23 33 0 0 chr5 45606625 45606655 -157478877 + AT_rich Low_complexity Low_complexity 1 30 0 283 266 74 35 chr5 45606657 45606860 -157478672 - L1ME LINE L1 -297 5824 5614 293 315 85 12 chr5 45606984 45607149 -157478383 - MLT1I LTR MaLR -199 210 34 2437 171 32 45 chr5 45608291 45608852 -157476680 + MER41A LTR ERV1 1 554 0 250 296 0 34 chr5 45609058 45609146 -157476386 + A-rich Low_complexity Low_complexity 1 85 0 1281 248 118 25 chr5 45610233 45610260 -157475272 + L1M4 LINE L1 3563 3586 -2560 2454 60 0 17 chr5 45610260 45610560 -157474972 - AluY SINE Alu -16 295 1 1281 248 118 25 chr5 45610560 45611226 -157474306 + L1M4 LINE L1 3586 4321 -1825 284 77 0 0 chr5 45611227 45611266 -157474266 - Alu SINE Alu -264 39 1 3451 184 24 42 chr5 45611689 45612477 -157473055 + LTR1 LTR ERV1 12 785 0 7160 89 8 19 chr5 45612554 45613622 -157471910 + MER11C LTR ERVK 1 1057 -14 48527 86 10 2 chr5 45613661 45620376 -157465156 + HERVK11 LTR ERVK 1 6765 -1188 7742 58 0 2 chr5 45620363 45621362 -157464170 + HERVK11 LTR ERVK 6957 7953 0 * 7414 88 5 9 chr5 45621362 45622424 -157463108 + MER11C LTR ERVK 1 1057 -14 943 206 150 14 chr5 45622474 45622760 -157462772 + LTR36 LTR ERV1 54 378 -233 297 322 84 30 chr5 45622785 45622987 -157462545 + MIR SINE MIR 2 214 -48 309 89 0 0 chr5 45623334 45623379 -157462153 + (CA)n Simple_repeat Simple_repeat 2 46 0 951 225 151 73 chr5 45623379 45623842 -157461690 + MLT1D LTR MaLR 2 500 -5 396 0 0 0 chr5 45623842 45623886 -157461646 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr5 45623885 45623914 -157461618 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 204 67 0 0 chr5 45623913 45623943 -157461589 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2719 13 0 10 chr5 45624581 45624887 -157460645 + AluYa5 SINE Alu 1 303 -8 361 332 40 35 chr5 45625315 45625541 -157459991 + MIR SINE MIR 23 249 -13 939 203 14 48 chr5 45625783 45626037 -157459495 - MLT1A2 LTR MaLR -3 502 131 415 137 0 0 chr5 45626048 45626121 -157459411 - MER4E LTR ERV1 0 779 707 3158 135 37 0 chr5 45626151 45626743 -157458789 - MER4B LTR ERV1 0 779 1 13002 119 25 33 chr5 45626743 45628076 -157457456 - MER4B-int LTR ERV1 0 6758 5415 2774 13 0 0 chr5 45628076 45628378 -157457154 + AluY SINE Alu 1 302 -9 13002 119 25 33 chr5 45628378 45629854 -157455678 - MER4B-int LTR ERV1 -1343 5415 3883 1257 158 8 22 chr5 45629854 45630343 -157455189 + MER4A LTR ERV1 1 550 -114 452 238 113 19 chr5 45630343 45630503 -157455029 + LTR28 LTR ERV1 1 175 -845 230 268 14 0 chr5 45630530 45630601 -157454931 + LTR1 LTR ERV1 119 190 -595 * 1880 199 130 18 chr5 45630568 45631138 -157454394 + LTR28 LTR ERV1 298 1010 -10 2454 204 82 79 chr5 45631150 45632046 -157453486 + LTR28-int LTR ERV1 2 4061 -1156 306 153 0 34 chr5 45632046 45632105 -157453427 + LTR28 LTR ERV1 964 1020 0 * 809 99 0 0 chr5 45632105 45632215 -157453317 + MER4B LTR ERV1 492 601 -9 6400 138 32 7 chr5 45632218 45633356 -157452176 - MER4B-int LTR ERV1 -2864 3894 2729 355 118 0 0 chr5 45633356 45633407 -157452125 + MER30 DNA MER1_type 1 51 -179 771 146 0 0 chr5 45633407 45633537 -157451995 + (GAA)n Simple_repeat Simple_repeat 1 130 0 720 142 179 0 chr5 45633539 45633701 -157451831 + MER30 DNA MER1_type 39 229 -1 4924 130 16 39 chr5 45633702 45634735 -157450797 - MER4B-int LTR ERV1 -4026 2732 1723 28098 122 14 57 chr5 45634735 45641159 -157444373 - L1PA7 LINE L1 -4 6150 12 3770 149 50 72 chr5 45641175 45642335 -157443197 - MER4B-int LTR ERV1 -5324 1434 492 1584 131 50 28 chr5 45642332 45642615 -157442917 - MER4B-int LTR ERV1 -6469 289 1 * 3047 144 39 2 chr5 45642615 45643205 -157442327 - MER4B LTR ERV1 0 779 3 492 206 0 0 chr5 45643206 45643298 -157442234 - MLT1A2 LTR MaLR -279 95 4 207 302 38 36 chr5 45644423 45644506 -157441026 + MIR SINE MIR 74 155 -58 242 56 28 0 chr5 45644553 45644589 -157440943 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 367 355 59 0 chr5 45645020 45645189 -157440343 + MIR SINE MIR 84 262 0 525 288 28 33 chr5 45646547 45646759 -157438773 + MER20 DNA MER1_type 5 215 -4 536 197 23 0 chr5 45647075 45647207 -157438325 + CT-rich Low_complexity Low_complexity 5 139 0 784 184 0 29 chr5 45647238 45647374 -157438158 - FLAM_C SINE Alu 0 133 2 674 201 7 0 chr5 45648020 45648159 -157437373 - L1 LINE L1 -950 5196 5057 28 91 0 0 chr5 45649133 45649210 -157436322 + AT_rich Low_complexity Low_complexity 1 77 0 21 36 0 0 chr5 45649778 45649806 -157435726 + AT_rich Low_complexity Low_complexity 1 28 0 508 293 6 12 chr5 45653466 45653633 -157431899 - MER63A DNA MER1_type -1 209 44 327 174 452 9 chr5 45653801 45653916 -157431616 + MER5A DNA MER1_type 17 182 -7 2607 62 0 0 chr5 45653939 45654247 -157431285 - AluY SINE Alu -3 308 1 294 29 0 0 chr5 45654270 45654305 -157431227 + (TG)n Simple_repeat Simple_repeat 2 36 0 1448 211 93 39 chr5 45654305 45654736 -157430796 + MSTB2 LTR MaLR 4 457 0 256 185 19 0 chr5 45656709 45656763 -157428769 + L1MC4 LINE L1 6658 6712 -1330 351 167 32 16 chr5 45656800 45656926 -157428606 + (TA)n Simple_repeat Simple_repeat 1 128 0 756 265 62 0 chr5 45660156 45660367 -157425165 + MER58A DNA MER1_type 1 224 0 320 275 69 38 chr5 45660530 45660661 -157424871 + LTR33 LTR ERVL 44 178 -343 6053 136 38 15 chr5 45661979 45663367 -157422165 + L1MA6 LINE L1 4877 6298 -2 2050 117 3 3 chr5 45663581 45663864 -157421668 + AluSg SINE Alu 1 283 -27 345 318 16 44 chr5 45663991 45664164 -157421368 + MIR SINE MIR 31 199 -9 4586 126 19 0 chr5 45665064 45665802 -157419730 + L1MA4A LINE L1 5542 6293 -10 1420 119 15 50 chr5 45666752 45666911 -157418621 - L1MA3 LINE L1 0 6305 6157 2768 7 0 0 chr5 45666911 45667209 -157418323 - AluYa5 SINE Alu -13 298 1 1420 119 15 50 chr5 45667209 45667310 -157418222 - L1MA3 LINE L1 -148 6157 6054 930 124 71 6 chr5 45667659 45667828 -157417704 - Tigger2 DNA MER2_type -55 2663 2484 1202 297 112 55 chr5 45667828 45668685 -157416847 - HAL1 LINE L1 -1268 1239 315 1620 197 11 27 chr5 45668685 45669056 -157416476 + MLT1A1 LTR MaLR 1 365 0 1202 297 112 55 chr5 45669056 45669202 -157416330 - HAL1 LINE L1 -2192 315 179 2325 89 0 0 chr5 45669318 45669611 -157415921 - AluY SINE Alu -18 293 1 2159 125 21 3 chr5 45669889 45670226 -157415306 - Tigger2 DNA MER2_type -236 2482 2140 1918 111 29 4 chr5 45670383 45670663 -157414869 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr5 45670663 45670691 -157414841 + AT_rich Low_complexity Low_complexity 1 28 0 756 321 141 5 chr5 45670832 45671228 -157414304 - LTR16A LTR ERVL 0 450 1 2215 101 3 10 chr5 45671851 45672159 -157413373 - AluSx SINE Alu -6 306 1 1624 220 31 3 chr5 45673096 45673451 -157412081 + MLT1A1 LTR MaLR 1 365 0 751 323 82 19 chr5 45674425 45674744 -157410788 + L1PA16 LINE L1 -593 4294967041 -6448 268 245 166 36 chr5 45674991 45675130 -157410402 + L1PA16 LINE L1 769 925 -5268 11868 211 23 56 chr5 45675850 45677291 -157408241 + L1PA16 LINE L1 803 2289 -3934 247 200 0 71 chr5 45677291 45677361 -157408171 - AluJb SINE Alu -78 224 160 11868 211 23 56 chr5 45677361 45679691 -157405841 + L1PA16 LINE L1 2289 4359 -1864 534 16 0 0 chr5 45679691 45679754 -157405778 + (CA)n Simple_repeat Simple_repeat 2 64 0 11868 211 23 56 chr5 45679754 45681560 -157403972 + L1PA16 LINE L1 4359 6222 -1 360 371 104 9 chr5 45682841 45683062 -157402470 - L2 LINE L2 0 3272 3031 2555 151 20 36 chr5 45683319 45683817 -157401715 + LTR2B LTR ERV1 1 490 0 12955 136 39 17 chr5 45685824 45687993 -157397539 - Tigger1 DNA MER2_type 0 2418 202 13204 104 5 8 chr5 45687993 45688484 -157397048 + L1P LINE L1 2708 3199 -2947 1953 134 0 4 chr5 45688484 45688791 -157396741 - AluSg SINE Alu 0 311 6 13204 104 5 8 chr5 45688791 45690248 -157395284 + L1P LINE L1 3199 4651 -1495 341 167 0 0 chr5 45690240 45690312 -157395220 + L1P LINE L1 3223 3294 -2852 * 6514 76 11 8 chr5 45690313 45691177 -157394355 + L1PA7 LINE L1 4657 5529 -625 2771 13 0 0 chr5 45691177 45691481 -157394051 - AluYa5 SINE Alu -7 304 1 6514 76 11 8 chr5 45691481 45692108 -157393424 + L1PA7 LINE L1 5529 6152 -2 228 211 18 0 chr5 45692161 45692218 -157393314 + L1MC4 LINE L1 7905 7962 -80 902 72 16 8 chr5 45692259 45692384 -157393148 - L1PA10 LINE L1 -4 6164 6039 1179 257 136 33 chr5 45692394 45693172 -157392360 + L1ME3 LINE L1 4277 4973 -1189 2169 96 0 7 chr5 45693172 45693463 -157392069 - AluSc SINE Alu -18 291 3 1179 257 136 33 chr5 45693463 45694142 -157391390 + L1ME3 LINE L1 4973 5872 -290 316 328 77 34 chr5 45694453 45694718 -157390814 + L1ME LINE L1 5511 5798 -444 202 100 0 60 chr5 45694724 45694774 -157390758 + (TTA)n Simple_repeat Simple_repeat 3 49 0 242 265 0 0 chr5 45694836 45694885 -157390647 + polypurine Low_complexity Low_complexity 4 52 0 25 65 0 0 chr5 45694939 45694985 -157390547 + AT_rich Low_complexity Low_complexity 1 46 0 452 319 101 42 chr5 45695096 45695642 -157389890 + L1ME4a LINE L1 5317 5894 -227 2278 115 0 3 chr5 45695747 45696059 -157389473 - AluSx SINE Alu -1 311 1 1618 119 56 7 chr5 45697481 45697783 -157387749 + L1MA7 LINE L1 5972 6288 -3 2348 192 113 8 chr5 45697887 45698392 -157387140 + MER74A LTR ERVL 1 558 0 37 62 0 0 chr5 45698615 45698680 -157386852 + AT_rich Low_complexity Low_complexity 1 65 0 806 281 33 5 chr5 45698868 45699078 -157386454 + MER58A DNA MER1_type 6 221 -3 243 0 0 0 chr5 45699110 45699137 -157386395 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 194 79 0 53 chr5 45699618 45699656 -157385876 + (GGA)n Simple_repeat Simple_repeat 3 38 0 1951 115 21 3 chr5 45700162 45700450 -157385082 + AluSq SINE Alu 1 293 -20 244 333 7 37 chr5 45702001 45702136 -157383396 - L1ME LINE L1 -304 5817 5687 552 295 98 27 chr5 45702171 45702395 -157383137 - MIR SINE MIR -21 241 2 365 326 67 19 chr5 45703532 45703721 -157381811 + MIR SINE MIR 32 221 -41 387 278 37 62 chr5 45704404 45704566 -157380966 + MER5B DNA MER1_type 19 176 -2 1792 111 0 0 chr5 45705540 45705775 -157379757 - AluSq SINE Alu -78 235 1 197 291 36 0 chr5 45705838 45705893 -157379639 + L2 LINE L2 3216 3272 0 637 322 105 42 chr5 45706207 45706713 -157378819 + MLT1H LTR MaLR 12 549 0 1873 223 49 10 chr5 45706730 45707219 -157378313 - L1 LINE L1 -3213 2933 2426 225 308 88 22 chr5 45707578 45707669 -157377863 - L2 LINE L2 -8 3264 3168 1230 263 65 31 chr5 45707716 45708195 -157377337 - Charlie4a DNA MER1_type -13 495 1 436 262 78 0 chr5 45708434 45708575 -157376957 + MER112 DNA MER1_type 109 260 0 1731 161 50 7 chr5 45709644 45709943 -157375589 + AluSx SINE Alu 1 312 0 363 289 0 0 chr5 45710194 45710284 -157375248 - L2 LINE L2 -1 3312 3223 287 299 123 10 chr5 45710613 45710751 -157374781 - MIR SINE MIR -62 146 45 2385 224 31 56 chr5 45710795 45711434 -157374098 + MLT1E2 LTR MaLR 1 623 -3 238 319 67 7 chr5 45712124 45712259 -157373273 - L1ME LINE L1 -390 5731 5589 2239 98 3 3 chr5 45712363 45712668 -157372864 + AluSc SINE Alu 1 305 -4 257 301 222 26 chr5 45713780 45713933 -157371599 + MER5A DNA MER1_type 6 188 -1 307 303 124 6 chr5 45713969 45714120 -157371412 - MER5A DNA MER1_type -14 175 4 207 167 0 0 chr5 45714559 45714601 -157370931 + (TTG)n Simple_repeat Simple_repeat 1 42 0 195 129 0 0 chr5 45715001 45715032 -157370500 + (CA)n Simple_repeat Simple_repeat 1 31 0 855 219 28 11 chr5 45715208 45715385 -157370147 + MLT1H LTR MaLR 1 180 -369 330 216 17 121 chr5 45715385 45715501 -157370031 - ORSL DNA AcHobo 0 275 172 1582 199 0 34 chr5 45715502 45715799 -157369733 + AluJb SINE Alu 2 288 -24 768 275 169 13 chr5 45715986 45716299 -157369233 + MLT1H LTR MaLR 188 549 0 259 281 31 31 chr5 45716431 45716527 -157369005 + L1MEd LINE L1 1158 1253 -4866 2671 143 39 12 chr5 45716860 45717344 -157368188 + L1MA7 LINE L1 5336 5832 -459 900 96 0 0 chr5 45717344 45717459 -157368073 + AluSp/q SINE Alu 175 289 -24 2739 137 0 38 chr5 45717459 45717956 -157367576 + L1MA7 LINE L1 5814 6291 0 336 158 40 79 chr5 45718012 45718113 -157367419 - L1MC4 LINE L1 -1 8041 7945 693 307 44 16 chr5 45718490 45718855 -157366677 - HAL1 LINE L1 -281 2226 1852 228 290 110 30 chr5 45718874 45718974 -157366558 + L2 LINE L2 3163 3270 -2 589 327 88 0 chr5 45719868 45720073 -157365459 + MIR SINE MIR 9 231 -31 413 308 38 32 chr5 45720362 45720547 -157364985 - MIR3 SINE MIR -2 206 21 180 0 0 0 chr5 45720703 45720723 -157364809 + (CATATA)n Simple_repeat Simple_repeat 3 22 0 2094 128 13 0 chr5 45721176 45721480 -157364052 + AluSx SINE Alu 4 311 -1 355 224 33 59 chr5 45722402 45722554 -157362978 - L1MC5 LINE L1 -50 7911 7764 198 0 0 0 chr5 45722575 45722597 -157362935 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1630 193 11 4 chr5 45722599 45722879 -157362653 - AluJo SINE Alu -29 283 2 31 68 0 0 chr5 45722908 45722967 -157362565 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr5 45723994 45724015 -157361517 + AT_rich Low_complexity Low_complexity 1 21 0 262 239 15 0 chr5 45724017 45724084 -157361448 - L1MC5 LINE L1 -399 7562 7495 699 90 156 0 chr5 45724093 45724215 -157361317 + L1MA8 LINE L1 6147 6287 -4 1531 243 47 67 chr5 45724243 45724946 -157360586 - L1MC5 LINE L1 -451 7510 6822 219 263 0 0 chr5 45724998 45725055 -157360477 + (TA)n Simple_repeat Simple_repeat 1 57 0 1351 199 107 0 chr5 45726070 45726342 -157359190 - MLT1D LTR MaLR 0 505 205 364 157 14 43 chr5 45726341 45726411 -157359121 - MLT1D LTR MaLR -435 70 3 * 375 226 58 58 chr5 45726415 45726552 -157358980 - MIR SINE MIR -21 241 105 3243 206 72 3 chr5 45727134 45727818 -157357714 - MER44D DNA MER2_type 0 605 3 5188 152 13 9 chr5 45727835 45728190 -157357342 - L1PB4 LINE L1 -15 6141 5789 438 20 0 0 chr5 45728190 45728241 -157357291 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 5188 152 13 9 chr5 45728241 45728613 -157356919 - L1PB4 LINE L1 -367 5789 5407 1918 186 103 3 chr5 45728613 45729000 -157356532 + MSTB LTR MaLR 1 426 0 5188 152 13 9 chr5 45729000 45729209 -157356323 - L1PB4 LINE L1 -749 5407 5200 629 251 17 29 chr5 45729900 45730075 -157355457 + MLT1H1 LTR MaLR 383 555 0 1113 296 64 14 chr5 45730148 45730570 -157354962 - MLT1J2 LTR MaLR -7 443 1 259 318 64 0 chr5 45731355 45731465 -157354067 - MER117 DNA MER1_type -56 141 25 534 331 104 21 chr5 45731520 45731807 -157353725 - L2 LINE L2 -7 3265 2955 2343 85 0 16 chr5 45732295 45732602 -157352930 - AluSc SINE Alu -7 302 1 30 0 0 0 chr5 45733390 45733420 -157352112 + AT_rich Low_complexity Low_complexity 1 30 0 32 0 0 0 chr5 45733562 45733594 -157351938 + AT_rich Low_complexity Low_complexity 1 32 0 2511 112 0 32 chr5 45734775 45734815 -157350717 - THE1B LTR MaLR 0 364 324 2211 64 26 51 chr5 45734815 45735127 -157350405 + AluY SINE Alu 1 304 -7 2511 112 0 32 chr5 45735127 45735461 -157350071 - THE1B LTR MaLR -40 324 2 268 318 0 0 chr5 45736563 45736673 -157348859 + A-rich Low_complexity Low_complexity 1 110 0 189 0 0 0 chr5 45738029 45738050 -157347482 + (GGCTG)n Simple_repeat Simple_repeat 1 21 0 2416 243 71 8 chr5 45738370 45738958 -157346574 - MLT1E2 LTR MaLR 0 626 2 946 260 180 17 chr5 45739795 45740211 -157345321 + MLT1F1 LTR MaLR 74 557 -10 2225 110 0 0 chr5 45740401 45740700 -157344832 + AluY SINE Alu 1 299 -12 192 382 0 0 chr5 45740835 45740890 -157344642 + MIR SINE MIR 40 94 -114 353 298 91 50 chr5 45741157 45741608 -157343924 + L1ME1 LINE L1 5333 5797 -553 894 184 6 12 chr5 45741732 45741895 -157343637 + AluJo SINE Alu 125 286 -26 2123 106 3 3 chr5 45742348 45742655 -157342877 - AluSg SINE Alu 0 307 1 604 113 130 9 chr5 45743704 45743819 -157341713 - MSTC LTR MaLR 0 428 300 237 300 126 57 chr5 45743938 45744168 -157341364 + L2 LINE L2 3068 3313 0 1481 205 3 24 chr5 45744374 45744672 -157340860 - AluJo SINE Alu -20 292 1 858 157 59 39 chr5 45744672 45744876 -157340656 - MER3 DNA MER1_type 0 209 2 1256 137 0 81 chr5 45744909 45745143 -157340389 - AluSc SINE Alu -4 305 91 424 103 39 13 chr5 45745742 45745820 -157339712 + MADE1 DNA Mariner 1 80 0 381 43 0 0 chr5 45746369 45746416 -157339116 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 286 167 0 chr5 45747800 45747926 -157337606 + MIR3 SINE MIR 55 201 -7 1134 248 30 21 chr5 45749062 45749401 -157336131 + L1ME1 LINE L1 5808 6149 -17 1442 253 100 42 chr5 45749951 45750453 -157335079 + MLT1F LTR MaLR 12 542 0 726 253 70 38 chr5 45750741 45751213 -157334319 + MLT1H1 LTR MaLR 1 524 -31 1225 89 0 0 chr5 45751352 45751510 -157334022 - AluY SINE Alu -7 304 147 1993 117 0 32 chr5 45753798 45754100 -157331432 + AluSx SINE Alu 9 301 0 558 67 0 0 chr5 45754358 45754433 -157331099 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2619 216 16 46 chr5 45754486 45755156 -157330376 + MER82 DNA MER2_type 3 652 -1 180 0 0 0 chr5 45755187 45755207 -157330325 + (TG)n Simple_repeat Simple_repeat 1 20 0 370 231 22 22 chr5 45755208 45755299 -157330233 + MLT1A1 LTR MaLR 26 116 -249 4426 192 50 7 chr5 45755315 45756142 -157329390 + L1MA2 LINE L1 17 878 -6687 * 15771 158 15 10 chr5 45756127 45760980 -157324552 + L1MA2 LINE L1 2806 7685 -38 234 158 0 0 chr5 45760993 45761031 -157324501 - L1M1 LINE L1 -443 5862 5825 * 274 51 0 0 chr5 45761030 45761069 -157324463 + L1MA3 LINE L1 6266 6304 -1 643 214 55 39 chr5 45761105 45761287 -157324245 + MLT1A1 LTR MaLR 170 354 -11 5374 136 17 25 chr5 45761742 45762581 -157322951 - L1PA15 LINE L1 -8 6157 5315 2598 80 119 5 chr5 45762581 45762983 -157322549 - LTR7 LTR ERV1 -2 448 1 5374 136 17 25 chr5 45762983 45763601 -157321931 - L1PA15 LINE L1 -850 5315 4693 374 385 91 23 chr5 45763902 45764330 -157321202 + L2 LINE L2 2852 3308 -5 372 270 133 52 chr5 45764559 45764792 -157320740 - MER110A LTR ERV1 0 468 217 255 61 0 0 chr5 45764819 45764852 -157320680 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 263 221 39 0 chr5 45765624 45765701 -157319831 - MER116 DNA Mariner 0 80 1 224 254 142 65 chr5 45765701 45765870 -157319662 - MIR3 SINE MIR -14 194 13 32 57 0 0 chr5 45766623 45766676 -157318856 + AT_rich Low_complexity Low_complexity 1 53 0 344 269 87 20 chr5 45766704 45766853 -157318679 + L1ME LINE L1 5491 5645 -519 445 257 28 73 chr5 45767135 45767195 -157318337 - L1ME1 LINE L1 -6 6160 6099 2829 16 0 0 chr5 45767195 45767507 -157318025 - AluYb8 SINE Alu -6 312 1 445 257 28 73 chr5 45767507 45767680 -157317852 - L1ME1 LINE L1 -67 6099 5938 242 220 0 34 chr5 45767800 45767859 -157317673 + LTR33A LTR ERVL 62 118 -405 2682 263 14 41 chr5 45767924 45768706 -157316826 - L1M4 LINE L1 -5774 768 8 22 35 0 0 chr5 45768947 45768976 -157316556 + AT_rich Low_complexity Low_complexity 1 29 0 2312 76 0 10 chr5 45769427 45769718 -157315814 + AluY SINE Alu 1 288 -23 180 0 0 0 chr5 45769725 45769745 -157315787 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 281 81 0 0 chr5 45770214 45770251 -157315281 - HSMAR1 DNA Mariner 0 1287 1251 855 354 85 44 chr5 45771154 45771606 -157313926 - L2 LINE L2 -675 2639 2207 1961 143 3 0 chr5 45771606 45771906 -157313626 + AluSx SINE Alu 1 301 -11 855 354 85 44 chr5 45771906 45772391 -157313141 - L2 LINE L2 -1107 2207 1663 894 174 52 19 chr5 45772415 45772627 -157312905 + L1MA6 LINE L1 6082 6300 0 949 67 17 34 chr5 45772698 45772892 -157312640 + (GAAA)n Simple_repeat Simple_repeat 1 365 0 949 67 17 34 chr5 45772892 45773070 -157312462 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1518 216 111 23 chr5 45773242 45773593 -157311939 + MLT2B1 LTR ERVL 1 382 -138 525 55 0 0 chr5 45773628 45773701 -157311831 + (GA)n Simple_repeat Simple_repeat 2 74 0 1101 267 63 31 chr5 45773710 45774155 -157311377 + L1ME3 LINE L1 1489 1947 -4449 516 296 79 32 chr5 45774176 45774549 -157310983 + L1ME3 LINE L1 5065 5457 -758 414 324 73 21 chr5 45774667 45774954 -157310578 + L1ME3 LINE L1 5595 5896 -335 2153 165 43 30 chr5 45776506 45777051 -157308481 + MLT2A2 LTR ERVL 1 554 0 1405 200 23 42 chr5 45778513 45778823 -157306709 + AluJb SINE Alu 1 304 -8 636 316 34 17 chr5 45778929 45779163 -157306369 + MIR SINE MIR 13 250 -12 969 149 12 0 chr5 45779479 45779640 -157305892 + U1 snRNA snRNA 1 163 -2 287 250 33 100 chr5 45780623 45780743 -157304789 + MIR3 SINE MIR 82 193 -15 252 0 0 0 chr5 45781571 45781599 -157303933 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 484 232 219 0 chr5 45782886 45783041 -157302491 + MER5A DNA MER1_type 1 189 0 2300 110 36 3 chr5 45783117 45783473 -157302059 - L1PB1 LINE L1 -1 6150 5783 467 59 30 40 chr5 45783474 45783575 -157301957 + (TA)n Simple_repeat Simple_repeat 2 101 0 199 0 0 61 chr5 45783666 45783699 -157301833 + (TA)n Simple_repeat Simple_repeat 1 31 0 505 172 9 38 chr5 45783699 45783806 -157301726 - L1PB1 LINE L1 -377 5777 5678 * 1061 113 5 0 chr5 45783747 45783918 -157301614 + L1PB1 LINE L1 5528 5704 -447 303 348 11 26 chr5 45784988 45785168 -157300364 + MER5A DNA MER1_type 7 173 -5 961 244 162 42 chr5 45785380 45785811 -157299721 - MLT1D LTR MaLR -22 483 1 286 346 60 17 chr5 45787056 45787236 -157298296 - MIR3 SINE MIR -36 172 7 36 23 0 0 chr5 45788013 45788056 -157297476 + AT_rich Low_complexity Low_complexity 1 43 0 897 205 0 0 chr5 45789580 45789741 -157295791 + AluSg/x SINE Alu 137 297 -15 21 0 0 0 chr5 45789748 45789769 -157295763 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 45789977 45790005 -157295527 + AT_rich Low_complexity Low_complexity 1 28 0 2024 175 2 53 chr5 45791446 45791857 -157293675 - MLT1B LTR MaLR 0 390 1 486 279 105 8 chr5 45792218 45792503 -157293029 + L1ME LINE L1 5256 5575 -595 772 321 138 32 chr5 45792709 45793239 -157292293 - L3 LINE CR1 -265 1312 727 195 139 0 0 chr5 45793274 45793310 -157292222 + (TG)n Simple_repeat Simple_repeat 1 36 0 247 260 0 0 chr5 45793318 45793395 -157292137 + (TA)n Simple_repeat Simple_repeat 1 77 0 22 0 0 0 chr5 45793741 45793763 -157291769 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 45794055 45794078 -157291454 + AT_rich Low_complexity Low_complexity 1 23 0 391 286 20 14 chr5 45794105 45794252 -157291280 - MER103 DNA DNA -16 150 3 184 290 140 11 chr5 45794312 45794405 -157291127 - L2 LINE L2 -769 2545 2441 263 313 28 16 chr5 45795365 45795485 -157290047 + MIR SINE MIR 36 153 -64 1101 295 57 26 chr5 45797350 45797774 -157287758 + LTR16C LTR ERVL 53 489 -2 187 337 92 0 chr5 45797779 45797877 -157287655 - L2 LINE L2 -30 3283 3177 904 355 37 9 chr5 45798273 45798622 -157286910 - LTR16A LTR ERVL -26 424 66 333 212 24 35 chr5 45799521 45799606 -157285926 + MIR3 SINE MIR 118 201 -7 604 203 65 54 chr5 45799966 45800190 -157285342 - LTR45 LTR ERV1 -8 609 302 1655 180 76 59 chr5 45800548 45800613 -157284919 - MLT2B1 LTR ERVL -8 512 450 228 100 0 0 chr5 45800613 45800653 -157284879 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1655 180 76 59 chr5 45800653 45800675 -157284857 - MLT2B1 LTR ERVL -70 450 430 2126 143 0 6 chr5 45800675 45800989 -157284543 - AluSx SINE Alu 0 312 1 1655 180 76 59 chr5 45800989 45801351 -157284181 - MLT2B1 LTR ERVL -90 430 1 622 333 95 26 chr5 45801649 45802112 -157283420 + L2 LINE L2 1958 2452 -862 2425 88 0 0 chr5 45803617 45803923 -157281609 - AluSq SINE Alu -7 306 1 25 95 0 0 chr5 45804600 45804674 -157280858 + AT_rich Low_complexity Low_complexity 1 74 0 372 315 91 59 chr5 45804873 45805531 -157280001 - L1MC4a LINE L1 -1875 5933 5255 22 56 0 0 chr5 45805616 45805652 -157279880 + AT_rich Low_complexity Low_complexity 1 36 0 31870 89 9 7 chr5 45806660 45807633 -157277899 - L1PA6 LINE L1 0 6154 5184 207 0 0 0 chr5 45807633 45807656 -157277876 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 31870 89 9 7 chr5 45807656 45812102 -157273430 - L1PA6 LINE L1 -970 5184 724 396 319 65 35 chr5 45813430 45813599 -157271933 - LTR16C LTR ERVL -167 324 151 21 36 0 0 chr5 45813926 45813954 -157271578 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 45814046 45814077 -157271455 + AT_rich Low_complexity Low_complexity 1 31 0 753 371 75 1 chr5 45814364 45814803 -157270729 + L2 LINE L2 2592 3065 -207 180 353 0 0 chr5 45815100 45815168 -157270364 - L2 LINE L2 -961 2353 2286 * 863 305 8 30 chr5 45815153 45815415 -157270117 + MIR SINE MIR 7 262 0 2299 114 0 0 chr5 45815431 45815730 -157269802 - AluSx SINE Alu -13 299 1 1864 150 10 7 chr5 45817360 45817666 -157267866 - AluJo SINE Alu -5 307 1 180 97 0 0 chr5 45817810 45817841 -157267691 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 211 294 0 0 chr5 45820651 45820719 -157264813 + T-rich Low_complexity Low_complexity 1 68 0 409 322 17 0 chr5 45821522 45821640 -157263892 + L2 LINE L2 3151 3270 -2 186 71 0 0 chr5 45821894 45821922 -157263610 + (TC)n Simple_repeat Simple_repeat 2 29 0 308 259 55 34 chr5 45822968 45823100 -157262432 + MIR SINE MIR 8 146 -62 255 61 0 0 chr5 45823473 45823506 -157262026 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2199 162 6 3 chr5 45823506 45823871 -157261661 - MER47A DNA MER2_type 0 366 1 252 272 12 0 chr5 45823901 45823982 -157261550 + (TA)n Simple_repeat Simple_repeat 2 83 0 378 265 13 40 chr5 45824063 45824214 -157261318 - MER103 DNA DNA -4 162 16 1183 176 19 159 chr5 45824312 45824726 -157260806 + MLT1A1 LTR MaLR 5 360 -5 22 0 0 0 chr5 45825554 45825576 -157259956 + AT_rich Low_complexity Low_complexity 1 22 0 439 276 148 35 chr5 45825618 45825908 -157259624 + L1MEd LINE L1 844 1166 -4953 1163 288 44 28 chr5 45825922 45826504 -157259028 + L2 LINE L2 2714 3309 -4 284 325 48 32 chr5 45826745 45826871 -157258661 - MIR SINE MIR -112 150 23 612 203 65 0 chr5 45827206 45827329 -157258203 + MLT1L LTR MaLR 149 279 -336 275 280 32 21 chr5 45827880 45827973 -157257559 - MIR SINE MIR -83 125 32 336 261 33 11 chr5 45828035 45828127 -157257405 - MIR SINE MIR -83 125 32 584 330 27 21 chr5 45828670 45828858 -157256674 + MIR SINE MIR 1 189 -73 393 231 99 16 chr5 45828870 45828991 -157256541 + MIR SINE MIR 132 262 0 240 335 90 57 chr5 45829035 45829369 -157256163 - L2 LINE L2 -23 3290 2946 1832 167 0 0 chr5 45830053 45830346 -157255186 + AluSx SINE Alu 1 293 -19 348 250 45 30 chr5 45831157 45831289 -157254243 + L1MEd LINE L1 1021 1154 -4965 267 275 92 37 chr5 45831389 45831498 -157254034 - L2 LINE L2 -5 3308 3194 1376 223 7 4 chr5 45832644 45832917 -157252615 - AluJo SINE Alu -23 289 16 1851 143 61 30 chr5 45833139 45833502 -157252030 - THE1C LTR MaLR 0 375 2 301 302 69 48 chr5 45834460 45834649 -157250883 + MIR SINE MIR 14 206 -56 22 35 0 0 chr5 45834664 45834693 -157250839 + AT_rich Low_complexity Low_complexity 1 29 0 808 279 79 0 chr5 45834818 45835047 -157250485 + MIR SINE MIR 6 252 -10 2861 112 11 20 chr5 45835555 45835993 -157249539 - MER57B LTR ERV1 0 434 1 1487 113 121 0 chr5 45835993 45836224 -157249308 - MER57B-int LTR ERV1 0 7537 7279 733 132 23 23 chr5 45836224 45836353 -157249179 - LTR54B LTR ERV1 -367 131 3 6892 123 54 10 chr5 45836359 45838095 -157247437 - MER57B-int LTR ERV1 -486 7330 5309 5634 147 44 28 chr5 45838100 45839765 -157245767 - MER57B-int LTR ERV1 -1720 3836 2186 252 137 59 0 chr5 45839761 45839812 -157245720 - MER57B-int LTR ERV1 -3726 2220 2167 * 4331 161 79 10 chr5 45839808 45841247 -157244285 - MER57B-int LTR ERV1 -2904 1976 288 * 4413 134 21 8 chr5 45841241 45841907 -157243625 - MER57B-int LTR ERV1 -6862 675 1 2774 105 26 26 chr5 45841911 45842340 -157243192 - MER57B LTR ERV1 -4 430 2 246 95 0 0 chr5 45842436 45842478 -157243054 + (TGGA)n Simple_repeat Simple_repeat 2 43 0 6344 152 53 9 chr5 45843608 45844787 -157240745 - Tigger3b DNA MER2_type 0 1231 1 704 212 92 48 chr5 45845391 45845683 -157239849 + L1MDa LINE L1 1295 1599 -4941 635 259 0 0 chr5 45845685 45845816 -157239716 + FLAM_A SINE Alu 1 131 -2 35936 98 11 9 chr5 45845824 45851964 -157233568 + L1PA6 LINE L1 3 6153 -1 3031 133 14 9 chr5 45851960 45852542 -157232990 + L1PB1 LINE L1 5098 5792 -359 * 182 36 0 36 chr5 45852542 45852570 -157232962 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 3031 133 14 9 chr5 45852570 45852932 -157232600 + L1PB1 LINE L1 5792 6151 0 1036 214 36 16 chr5 45852933 45853185 -157232347 + L1M4 LINE L1 4692 4948 -1198 429 292 34 6 chr5 45853202 45853380 -157232152 + L1M4 LINE L1 5084 5266 -880 3379 240 45 13 chr5 45853385 45854440 -157231092 + L1M4 LINE L1 3067 4154 -1992 806 144 11 249 chr5 45854413 45854795 -157230737 + L1MB8 LINE L1 5643 5933 -245 * 302 336 42 21 chr5 45855720 45855863 -157229669 - L2 LINE L2 -1 3312 3167 284 304 138 73 chr5 45857423 45857792 -157227740 - L2 LINE L2 0 3313 2921 327 93 27 53 chr5 45857800 45857875 -157227657 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 7377 252 28 43 chr5 45857894 45860318 -157225214 + L1MA4A LINE L1 2 2388 -4461 9888 185 68 22 chr5 45860335 45862001 -157223531 + L1MA4A LINE L1 3308 5151 -1821 1493 190 17 48 chr5 45862001 45862290 -157223242 + AluJo SINE Alu 1 280 -32 9888 185 68 22 chr5 45862290 45863409 -157222123 + L1MA4A LINE L1 5151 6217 -755 1242 141 141 0 chr5 45863416 45863664 -157221868 + L1MA4A LINE L1 6341 6623 -382 6687 175 101 35 chr5 45863951 45865522 -157220010 + MER52A LTR ERV1 1 1753 -2 279 296 23 0 chr5 45865581 45865669 -157219863 - MIR SINE MIR -12 250 161 4215 98 27 27 chr5 45865683 45866318 -157219214 - MER41B LTR ERV1 0 635 1 299 167 0 0 chr5 45866644 45866692 -157218840 + Alu SINE Alu 234 281 -21 239 220 34 17 chr5 45867394 45867453 -157218079 + GA-rich Low_complexity Low_complexity 4 63 0 328 350 64 9 chr5 45867579 45867799 -157217733 - MIR SINE MIR -1 261 30 2339 97 0 7 chr5 45867949 45868249 -157217283 - AluSg SINE Alu -12 298 1 315 71 0 0 chr5 45868313 45868355 -157217177 + (CA)n Simple_repeat Simple_repeat 1 42 0 413 307 118 64 chr5 45869699 45870165 -157215367 + L1MEd LINE L1 478 968 -5237 1319 274 148 58 chr5 45870225 45871555 -157213977 + HAL1 LINE L1 15 1464 -1043 290 278 37 9 chr5 45871993 45872101 -157213431 + MER114 LTR ERV 2 112 -536 204 289 0 19 chr5 45872168 45872220 -157213312 - L2 LINE L2 -2 3311 3261 2242 94 3 0 chr5 45872268 45872555 -157212977 + AluSx SINE Alu 24 311 -1 2766 133 4 20 chr5 45872562 45873014 -157212518 - L1PA15 LINE L1 -16 6149 5705 7737 171 26 13 chr5 45873014 45873769 -157211763 + ERVL-D LTR ERVL 2223 3006 -2758 2465 122 89 0 chr5 45873769 45874162 -157211370 + MSTA LTR MaLR 1 428 0 7737 171 26 13 chr5 45874162 45874853 -157210679 + ERVL-D LTR ERVL 3006 3687 -2077 7222 172 28 15 chr5 45874842 45876207 -157209325 + ERVL-D LTR ERVL 4374 5755 -9 * 1021 174 11 0 chr5 45876209 45876393 -157209139 + MLT2D LTR ERVL 1 186 -228 411 68 0 0 chr5 45876408 45876467 -157209065 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 331 102 0 0 chr5 45876468 45876517 -157209015 + MLT2C2 LTR ERVL 413 461 -3 278 310 40 10 chr5 45876531 45876631 -157208901 + L1ME3A LINE L1 5963 6065 -105 279 271 75 28 chr5 45876737 45876951 -157208581 + L1MEd LINE L1 1051 1274 -4931 814 219 71 30 chr5 45877027 45877202 -157208330 - MSTD LTR MaLR -2 394 228 2399 137 39 0 chr5 45877202 45877561 -157207971 - THE1C LTR MaLR 0 375 3 814 219 71 30 chr5 45877561 45877730 -157207802 - MSTD LTR MaLR -168 228 1 2840 235 77 21 chr5 45877735 45878463 -157207069 - MSTD-int LTR MaLR -6 1729 961 * 3655 197 18 12 chr5 45878441 45879211 -157206321 - MSTD-int LTR MaLR -959 776 2 958 204 65 27 chr5 45879212 45879549 -157205983 - MSTD LTR MaLR 0 396 6 4879 179 13 14 chr5 45879643 45880983 -157204549 + L1PA16 LINE L1 4221 5554 -612 2295 144 52 25 chr5 45880984 45881427 -157204105 + L1PA16 LINE L1 5710 6164 -2 304 293 92 24 chr5 45881428 45881592 -157203940 + L1MEd LINE L1 1546 1720 -4676 1695 181 48 0 chr5 45882528 45882703 -157202829 - AluJo SINE Alu -3 309 113 297 0 0 0 chr5 45882703 45882736 -157202796 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1695 181 48 0 chr5 45882736 45882853 -157202679 - AluJo SINE Alu -199 113 3 462 277 25 43 chr5 45883068 45883303 -157202229 - L1MDa LINE L1 -2045 4495 4265 332 304 64 8 chr5 45883488 45883613 -157201919 - L1MDa LINE L1 -2381 4159 4028 403 268 25 46 chr5 45883691 45883930 -157201602 - L1MDa LINE L1 -3625 2915 2682 328 293 41 34 chr5 45883939 45884086 -157201446 - L1MDa LINE L1 -3942 2598 2451 313 257 89 10 chr5 45884079 45884180 -157201352 - L1MDa LINE L1 -4941 1589 1481 * 510 170 11 0 chr5 45884255 45884349 -157201183 - L1MDa LINE L1 -5987 543 449 233 348 22 22 chr5 45884387 45884479 -157201053 + MIR SINE MIR 41 132 -76 2146 115 0 3 chr5 45884550 45884846 -157200686 - AluSc SINE Alu -2 307 13 199 227 134 62 chr5 45884962 45885059 -157200473 + MIR SINE MIR 34 137 -71 588 248 96 54 chr5 45885586 45885900 -157199632 - LTR16A1 LTR ERVL -130 327 1 22 0 0 0 chr5 45886754 45886776 -157198756 + AT_rich Low_complexity Low_complexity 1 22 0 760 168 0 8 chr5 45886776 45886901 -157198631 - AluJb SINE Alu -188 124 1 504 332 25 25 chr5 45887076 45887314 -157198218 - MIR SINE MIR 0 262 25 228 86 0 0 chr5 45888222 45888257 -157197275 + (A)n Simple_repeat Simple_repeat 1 35 0 400 100 143 0 chr5 45888404 45888474 -157197058 - MADE1 DNA Mariner 0 80 1 298 302 149 18 chr5 45888722 45888944 -157196588 + MER102a DNA MER1_type 62 312 -18 1561 163 33 118 chr5 45889707 45890106 -157195426 - MLT1A1 LTR MaLR 0 365 1 218 269 215 0 chr5 45890373 45890466 -157195066 - L2 LINE L2 0 3272 3160 493 225 246 0 chr5 45890576 45890714 -157194818 - MER5A DNA MER1_type 0 189 18 218 293 17 0 chr5 45891442 45891500 -157194032 - MER5B DNA MER1_type -46 132 74 1324 191 71 76 chr5 45893256 45893623 -157191909 + MLT1A1 LTR MaLR 1 365 0 198 325 26 44 chr5 45893801 45893915 -157191617 + MIR SINE MIR 99 210 -52 1055 173 66 0 chr5 45894054 45894251 -157191281 + MER6B DNA MER2_type 1 210 0 422 316 65 36 chr5 45896303 45896471 -157189061 - MER5A DNA MER1_type -5 184 12 839 199 0 75 chr5 45896510 45896696 -157188836 + MER5A DNA MER1_type 3 174 -15 1258 172 52 26 chr5 45896705 45897013 -157188519 + MER33 DNA MER1_type 9 324 0 951 218 69 0 chr5 45897043 45897245 -157188287 + MER20 DNA MER1_type 1 216 -3 465 243 24 89 chr5 45897263 45897432 -157188100 + MER5B DNA MER1_type 20 177 -1 278 211 18 0 chr5 45897500 45897557 -157187975 - MER5A DNA MER1_type -108 81 24 2320 91 17 0 chr5 45897953 45898251 -157187281 + AluSg SINE Alu 1 303 -7 295 275 86 94 chr5 45898586 45898819 -157186713 + L2 LINE L2 3079 3309 -4 323 345 30 12 chr5 45899010 45899175 -157186357 - L2 LINE L2 -420 2894 2727 352 311 155 20 chr5 45899375 45899523 -157186009 + MER5A DNA MER1_type 22 189 0 869 273 34 72 chr5 45899955 45900369 -157185163 + L2 LINE L2 2911 3308 -5 590 304 109 9 chr5 45900392 45900612 -157184920 + MIR SINE MIR 2 243 -19 405 309 71 36 chr5 45900812 45900980 -157184552 - MIR3 SINE MIR -11 197 24 358 328 86 40 chr5 45901046 45901220 -157184312 - MIR3 SINE MIR -11 197 16 448 275 65 30 chr5 45903067 45903267 -157182265 + MIR SINE MIR 1 207 -55 346 304 12 71 chr5 45904864 45905032 -157180500 + MER5A DNA MER1_type 17 174 -15 205 276 146 60 chr5 45905024 45905209 -157180323 + L3b LINE CR1 1149 1349 -234 * 207 0 0 0 chr5 45905742 45905765 -157179767 + (A)n Simple_repeat Simple_repeat 1 23 0 882 179 92 5 chr5 45905940 45906135 -157179397 - MER20 DNA MER1_type -1 218 7 575 304 119 5 chr5 45906593 45906794 -157178738 + MIR SINE MIR 25 248 -14 283 301 57 24 chr5 45907371 45907494 -157178038 + L2 LINE L2 2941 3067 -205 309 317 50 17 chr5 45907666 45907786 -157177746 + L2 LINE L2 3189 3312 -1 22 56 0 0 chr5 45907986 45908022 -157177510 + AT_rich Low_complexity Low_complexity 1 36 0 258 294 65 11 chr5 45908045 45908137 -157177395 - MIR SINE MIR -48 214 118 305 137 0 0 chr5 45908613 45908664 -157176868 + MADE1 DNA Mariner 30 80 0 246 81 0 0 chr5 45909123 45909160 -157176372 + (TG)n Simple_repeat Simple_repeat 2 38 0 320 296 25 54 chr5 45909213 45909527 -157176005 - L1ME4a LINE L1 -218 5903 5599 1564 173 30 12 chr5 45909747 45910112 -157175420 + MER47B DNA MER2_type 1 418 0 609 304 59 32 chr5 45910112 45910220 -157175312 - LTR16C LTR ERVL -56 435 331 433 278 9 17 chr5 45910220 45910335 -157175197 + MER81 DNA DNA 1 114 0 609 304 59 32 chr5 45910335 45910564 -157174968 - LTR16C LTR ERVL -160 331 89 236 220 20 50 chr5 45911027 45911127 -157174405 + (TA)n Simple_repeat Simple_repeat 2 98 0 1040 99 0 0 chr5 45911174 45911326 -157174206 - L1MA4 LINE L1 -69 6231 6080 252 310 28 0 chr5 45912076 45912147 -157173385 - MIR SINE MIR -55 153 81 333 283 0 20 chr5 45912651 45912750 -157172782 - L1MC4 LINE L1 -1334 6708 6612 300 294 11 11 chr5 45912671 45912763 -157172769 + L1MC4 LINE L1 6612 6703 -1339 * 231 36 0 0 chr5 45913415 45913443 -157172089 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1330 134 222 57 chr5 45913779 45913930 -157171602 + MSTA LTR MaLR 1 126 -302 2021 118 0 4 chr5 45913930 45914252 -157171280 - AluSg SINE Alu 0 321 1 1330 134 222 57 chr5 45914252 45914450 -157171082 + MSTA LTR MaLR 126 409 -19 1941 166 3 0 chr5 45917658 45917953 -157167579 + AluJb SINE Alu 1 296 -16 1683 226 100 36 chr5 45918335 45918857 -157166675 + MLT1H1 LTR MaLR 1 555 0 256 363 44 0 chr5 45919101 45919192 -157166340 - L2 LINE L2 -9 3263 3169 1263 228 100 6 chr5 45919257 45919568 -157165964 - MER58B DNA MER1_type 0 341 2 2100 182 37 47 chr5 45921659 45922169 -157163363 + MLT1D LTR MaLR 1 505 0 694 181 0 55 chr5 45922399 45922526 -157163006 + FLAM_A SINE Alu 1 120 -13 197 0 0 67 chr5 45922533 45922563 -157162969 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 738 261 31 15 chr5 45922739 45922934 -157162598 + MIR SINE MIR 40 237 -25 209 309 118 62 chr5 45923246 45923424 -157162108 + MER5A DNA MER1_type 2 189 0 218 313 0 60 chr5 45924321 45924404 -157161128 - MER5A DNA MER1_type -105 84 7 288 0 0 0 chr5 45924921 45924953 -157160579 + (TGG)n Simple_repeat Simple_repeat 3 34 0 525 309 121 53 chr5 45925437 45925851 -157159681 - L1ME4a LINE L1 -218 5903 5462 322 300 50 10 chr5 45926110 45926210 -157159322 - MIR SINE MIR 0 262 159 1616 240 62 5 chr5 45926215 45926652 -157158880 + MLT1C LTR MaLR 6 467 0 354 254 144 0 chr5 45926675 45926791 -157158741 - MIR SINE MIR -72 136 4 2185 166 48 52 chr5 45926808 45927290 -157158242 - LTR26B LTR ERV1 0 531 52 35463 91 12 7 chr5 45927292 45933397 -157152135 - L1PA6 LINE L1 -7 6147 11 431 310 39 19 chr5 45933444 45933599 -157151933 + MIR3 SINE MIR 36 193 -15 267 288 71 65 chr5 45934103 45934273 -157151259 - MIR SINE MIR 0 262 92 225 229 205 12 chr5 45934264 45934347 -157151185 - L2 LINE L2 0 3272 3174 * 3593 110 8 4 chr5 45935313 45935822 -157149710 + MER9 LTR ERVK 1 511 0 621 40 0 0 chr5 45936446 45936522 -157149010 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 1454 168 42 54 chr5 45936982 45937316 -157148216 + MER2 DNA MER2_type 1 330 -15 1814 150 0 41 chr5 45937341 45937635 -157147897 - AluJo SINE Alu -30 282 1 373 317 126 13 chr5 45938153 45938383 -157147149 - MIR SINE MIR -5 257 2 207 328 206 13 chr5 45938727 45938965 -157146567 + L2 LINE L2 2682 2965 -349 189 107 0 0 chr5 45939429 45939457 -157146075 + (CA)n Simple_repeat Simple_repeat 1 28 0 265 261 269 8 chr5 45942436 45942566 -157142966 + L3 LINE CR1 1250 1413 -164 333 315 0 0 chr5 45994153 45994245 -157091287 - L1MC4 LINE L1 -1337 6705 6614 * 337 261 0 22 chr5 45994167 45994259 -157091273 + L1MC4 LINE L1 6614 6703 -1339 7543 186 11 13 chr5 45994261 45996248 -157089284 - L1P5 LINE L1 -564 5587 3611 185 423 32 0 chr5 45997560 45997683 -157087849 - L3 LINE CR1 -23 1554 1428 284 197 0 84 chr5 45997711 45997727 -157087805 + MIR SINE MIR 195 211 -51 2078 117 71 31 chr5 45997727 45998077 -157087455 - THE1B LTR MaLR 0 364 1 284 197 0 84 chr5 45998077 45998131 -157087401 + MIR SINE MIR 211 259 -3 1820 51 21 0 chr5 45999235 45999472 -157086060 - L1PB1 LINE L1 0 6151 5910 1729 169 3 7 chr5 46000659 46000943 -157084589 + AluJb SINE Alu 1 283 -29 2436 126 17 0 chr5 46001527 46001885 -157083647 + THE1B LTR MaLR 1 364 0 455 175 25 0 chr5 46001989 46002069 -157083463 + L1PB4 LINE L1 6057 6138 -18 12171 57 2 0 chr5 46002154 46004474 -157081058 - L1PA6 LINE L1 -6 6148 3816 695 191 37 56 chr5 46004574 46004736 -157080796 - MIR SINE MIR -10 252 94 553 291 133 40 chr5 46004788 46005111 -157080421 - L3 LINE CR1 -7 1570 1218 189 268 54 0 chr5 46005132 46005188 -157080344 + L2 LINE L2 2695 2753 -561 809 238 133 47 chr5 46005239 46005601 -157079931 - MLT1J1 LTR MaLR -47 399 7 215 390 112 4 chr5 46005608 46005857 -157079675 + L2 LINE L2 2821 3096 -176 29 47 0 0 chr5 46005887 46005930 -157079602 + AT_rich Low_complexity Low_complexity 1 43 0 208 333 83 49 chr5 46006011 46006155 -157079377 + L2 LINE L2 2598 2746 -568 512 315 0 14 chr5 46006181 46006324 -157079208 - MER5A DNA MER1_type -48 141 1 221 374 26 0 chr5 46006426 46006541 -157078991 + L2 LINE L2 2933 3050 -222 4836 184 14 29 chr5 46006850 46007839 -157077693 + MER21-int LTR ERV1 2912 3885 -306 7860 106 15 0 chr5 46007939 46009098 -157076434 - L1P3 LINE L1 -5285 1176 1 23 0 0 0 chr5 46009472 46009495 -157076037 + AT_rich Low_complexity Low_complexity 1 23 0 4060 93 17 21 chr5 46009496 46009849 -157075683 - L1PB1 LINE L1 -15 6136 5786 2239 115 0 31 chr5 46009849 46010170 -157075362 - AluSq SINE Alu -2 311 1 4060 93 17 21 chr5 46010170 46010420 -157075112 - L1PB1 LINE L1 -365 5786 5536 181 211 0 96 chr5 46010826 46010878 -157074654 + L2 LINE L2 3221 3267 -5 204 274 119 36 chr5 46011082 46011166 -157074366 - MER5A DNA MER1_type -6 183 93 * 924 196 82 14 chr5 46011107 46011326 -157074206 + MIR SINE MIR 8 241 -21 298 379 8 0 chr5 46011995 46012119 -157073413 + MIR3 SINE MIR 51 175 -33 288 333 28 9 chr5 46012678 46012786 -157072746 + MIR3 SINE MIR 68 177 -31 838 18 0 0 chr5 46013121 46013230 -157072302 - L1P LINE L1 -752 5403 5295 * 3835 11 0 2 chr5 46013228 46013665 -157071867 + L1PA3 LINE L1 5395 5830 -325 1916 181 40 32 chr5 46013917 46014458 -157071074 + MLT2A2 LTR ERVL 1 553 -1 416 289 91 50 chr5 46015642 46015862 -157069670 - MLT1L LTR MaLR 0 615 406 2176 103 0 17 chr5 46015862 46016162 -157069370 + AluSx SINE Alu 1 295 -17 416 289 91 50 chr5 46016162 46016346 -157069186 - MLT1L LTR MaLR -209 406 120 252 59 0 0 chr5 46016520 46016554 -157068978 + (CA)n Simple_repeat Simple_repeat 2 35 0 256 300 0 0 chr5 46017603 46017663 -157067869 + MIR SINE MIR 90 149 -59 2194 105 3 0 chr5 46017939 46018234 -157067298 + AluSg1 SINE Alu 1 296 -13 202 232 0 36 chr5 46018497 46018553 -157066979 + (TCTCTG)n Simple_repeat Simple_repeat 6 59 0 225 151 38 0 chr5 46019120 46019173 -157066359 + (TATAG)n Simple_repeat Simple_repeat 2 56 0 213 304 142 20 chr5 46019818 46019966 -157065566 - L2 LINE L2 -4 3309 3144 835 32 16 58 chr5 46020324 46020512 -157065020 + (TA)n Simple_repeat Simple_repeat 1 180 0 2935 60 21 8 chr5 46020512 46020896 -157064636 - MLT2A1 LTR ERVL -55 389 1 664 105 11 0 chr5 46020896 46020991 -157064541 + MER21A LTR ERV1 481 576 -355 2347 272 77 52 chr5 46021038 46022201 -157063331 + L1PBa LINE L1 412 1603 -5260 1434 149 23 0 chr5 46022201 46022422 -157063110 + AluJb SINE Alu 81 306 -6 2175 128 8 14 chr5 46022422 46022812 -157062720 + L1PB3 LINE L1 692 1079 -5125 7421 202 37 76 chr5 46022828 46024234 -157061298 + L1PB3 LINE L1 3169 4437 -1778 384 22 0 0 chr5 46024234 46024279 -157061253 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 7421 202 37 76 chr5 46024279 46025232 -157060300 + L1PB3 LINE L1 4437 5426 -789 5102 134 10 4 chr5 46025504 46026311 -157059221 + L1PB3 LINE L1 5395 6206 -5 554 148 20 10 chr5 46026687 46026788 -157058744 + MLT1F1 LTR MaLR 1 102 -465 3312 20 2 8 chr5 46026890 46027283 -157058249 + L1PA3 LINE L1 5765 6155 0 579 281 51 23 chr5 46027598 46027815 -157057717 - L2 LINE L2 0 3313 3091 452 312 51 13 chr5 46027841 46027998 -157057534 - MIR3 SINE MIR -39 169 7 228 122 0 0 chr5 46028730 46028771 -157056761 + (GA)n Simple_repeat Simple_repeat 1 41 0 2480 147 19 23 chr5 46029713 46030141 -157055391 - MSTB LTR MaLR 0 426 1 497 268 115 13 chr5 46031008 46031165 -157054367 + MER5B DNA MER1_type 1 173 -5 210 37 0 0 chr5 46031328 46031355 -157054177 + (TTA)n Simple_repeat Simple_repeat 2 28 0 248 331 91 19 chr5 46031574 46031728 -157053804 - L2 LINE L2 -817 2497 2333 508 300 83 0 chr5 46032021 46032201 -157053331 + L2 LINE L2 3119 3313 0 522 249 140 64 chr5 46032214 46032395 -157053137 - MIR SINE MIR -63 145 1 233 258 0 65 chr5 46033029 46033091 -157052441 - MIR SINE MIR -56 152 95 380 274 35 0 chr5 46034292 46034405 -157051127 + MER94 DNA DNA 1 117 -17 21 0 0 0 chr5 46034875 46034896 -157050636 + AT_rich Low_complexity Low_complexity 1 21 0 225 273 26 26 chr5 46034970 46035047 -157050485 + L2 LINE L2 3154 3230 -42 498 108 0 0 chr5 46035066 46035140 -157050392 + (TA)n Simple_repeat Simple_repeat 1 74 0 968 198 0 135 chr5 46035153 46035472 -157050060 - AluJo SINE Alu -33 279 4 492 62 0 0 chr5 46035663 46035727 -157049805 + (TA)n Simple_repeat Simple_repeat 1 64 0 1661 123 0 126 chr5 46035728 46036061 -157049471 - AluJb SINE Alu -21 291 1 235 244 78 33 chr5 46036323 46036413 -157049119 - MIR SINE MIR -123 139 46 576 256 91 22 chr5 46037194 46037424 -157048108 + MER112 DNA MER1_type 2 247 -13 1725 237 64 51 chr5 46037684 46038384 -157047148 + HsTC2a DNA Tc2 4 712 -32 2842 223 78 9 chr5 46038387 46039121 -157046411 + L1ME1 LINE L1 5397 6334 0 2189 123 0 0 chr5 46039130 46039431 -157046101 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr5 46039794 46039816 -157045716 + AT_rich Low_complexity Low_complexity 1 22 0 400 240 77 29 chr5 46040143 46040247 -157045285 + MIR SINE MIR 78 186 -76 22 0 0 0 chr5 46040548 46040570 -157044962 + AT_rich Low_complexity Low_complexity 1 22 0 737 76 0 0 chr5 46041575 46041723 -157043809 + L1PA8 LINE L1 6066 6213 0 472 226 161 19 chr5 46043656 46043811 -157041721 + MER5B DNA MER1_type 2 178 0 2102 114 3 3 chr5 46044074 46044371 -157041161 - AluJb SINE Alu -13 299 3 298 260 0 14 chr5 46044821 46044894 -157040638 + L2 LINE L2 3242 3313 0 2115 146 30 30 chr5 46045637 46046001 -157039531 + THE1B LTR MaLR 1 364 0 342 355 36 68 chr5 46046869 46047120 -157038412 + L2 LINE L2 3001 3243 -29 406 326 14 14 chr5 46047242 46047380 -157038152 - MIR3 SINE MIR -60 148 11 1663 167 0 20 chr5 46047950 46048271 -157037261 + AluSx SINE Alu 1 315 0 21 0 0 0 chr5 46048895 46048916 -157036616 + AT_rich Low_complexity Low_complexity 1 21 0 1848 116 8 0 chr5 46049662 46049912 -157035620 - AluSg SINE Alu -58 252 1 183 156 0 0 chr5 46050227 46050259 -157035273 + (CA)n Simple_repeat Simple_repeat 1 32 0 1519 186 14 26 chr5 46051107 46051456 -157034076 - L1MA10 LINE L1 -3 6331 5987 24 0 0 0 chr5 46051587 46051611 -157033921 + AT_rich Low_complexity Low_complexity 1 24 0 3091 45 3 0 chr5 46051611 46051991 -157033541 - L1PA4 LINE L1 -3 6152 5772 18915 37 2 0 chr5 46051991 46054381 -157031151 + L1P2 LINE L1 3072 5466 -689 24 0 0 0 chr5 46054381 46054405 -157031127 + AT_rich Low_complexity Low_complexity 1 24 0 2472 8 0 0 chr5 46054405 46054670 -157030862 + AluYa5 SINE Alu 36 300 -11 1454 146 40 4 chr5 46055014 46055261 -157030271 - Tigger2 DNA MER2_type 0 2718 2463 1936 105 105 0 chr5 46055306 46055573 -157029959 - AluSg SINE Alu -13 297 3 4136 158 35 4 chr5 46055579 46056313 -157029219 - Tigger2 DNA MER2_type -1946 772 16 1690 161 61 26 chr5 46056310 46056652 -157028880 - MLT1B LTR MaLR -9 381 28 * 10427 102 9 2 chr5 46056726 46061731 -157023801 - L1PA7 LINE L1 -1 6153 957 288 0 0 0 chr5 46062569 46062601 -157022931 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 513 130 0 0 chr5 46062611 46062680 -157022852 - FRAM SINE Alu -39 137 69 1969 144 7 3 chr5 46062702 46063007 -157022525 + AluSx SINE Alu 1 306 -6 272 389 70 13 chr5 46063698 46063927 -157021605 + MIR SINE MIR 8 249 -13 2177 117 3 3 chr5 46064107 46064405 -157021127 - AluSx SINE Alu -14 298 1 21 57 0 0 chr5 46064874 46064909 -157020623 + AT_rich Low_complexity Low_complexity 1 35 0 2715 73 6 3 chr5 46065039 46065393 -157020139 + THE1A LTR MaLR 1 355 0 22 35 0 0 chr5 46066174 46066203 -157019329 + AT_rich Low_complexity Low_complexity 1 29 0 581 262 175 55 chr5 46066246 46066738 -157018794 - MLT1H1 LTR MaLR 0 555 5 213 328 0 0 chr5 46066944 46067002 -157018530 - MIR3 SINE MIR -3 205 148 252 0 0 0 chr5 46069516 46069544 -157015988 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 743 174 90 2 chr5 46069677 46069962 -157015570 + MLT1A2 LTR MaLR 5 374 0 2247 286 130 24 chr5 46070413 46071762 -157013770 + L2 LINE L2 1773 3279 -34 1641 195 26 3 chr5 46072122 46072424 -157013108 - AluJb SINE Alu -3 309 1 446 278 74 6 chr5 46072441 46072603 -157012929 + Charlie8 DNA MER1_type 73 245 -2172 329 209 15 0 chr5 46072679 46072746 -157012786 + Charlie8 DNA MER1_type 1349 1416 -1001 515 295 27 0 chr5 46072992 46073141 -157012391 + MIR SINE MIR 20 172 -90 916 66 0 0 chr5 46073286 46073407 -157012125 + L1PA3 LINE L1 6035 6155 0 1974 138 28 0 chr5 46073601 46073890 -157011642 + AluSx SINE Alu 1 297 -15 282 408 85 23 chr5 46073916 46074436 -157011096 + L2 LINE L2 2425 2976 -338 184 279 128 35 chr5 46074593 46074679 -157010853 + MIR3 SINE MIR 9 102 -106 2199 122 0 7 chr5 46074927 46075231 -157010301 - AluSx SINE Alu -9 303 2 2036 135 0 0 chr5 46076074 46076362 -157009170 - AluSx SINE Alu -24 288 1 21 89 0 0 chr5 46076609 46076665 -157008867 + AT_rich Low_complexity Low_complexity 1 56 0 5834 104 36 5 chr5 46076852 46078068 -157007464 + L1PA11 LINE L1 4922 6174 0 300 221 44 0 chr5 46078229 46078297 -157007235 + L2 LINE L2 3242 3312 -1 2391 82 0 0 chr5 46078745 46079039 -157006493 + AluY SINE Alu 1 294 -17 730 236 169 0 chr5 46080128 46080323 -157005209 - MIR SINE MIR -5 257 30 258 32 0 0 chr5 46080488 46080519 -157005013 + (TATG)n Simple_repeat Simple_repeat 1 31 0 295 194 49 70 chr5 46080549 46080667 -157004865 + MLT1D LTR MaLR 5 107 -406 40838 34 21 1 chr5 46080681 46086712 -156998820 - L1PA2 LINE L1 -2 6153 1 1372 212 40 50 chr5 46086736 46087133 -156998399 + MLT1D LTR MaLR 113 505 0 2078 154 0 0 chr5 46087873 46088179 -156997353 + AluSx SINE Alu 1 306 -6 1052 150 5 10 chr5 46088198 46088398 -156997134 + L1PBa LINE L1 2 200 -6663 9727 144 46 8 chr5 46088400 46090525 -156995007 + L1PBa LINE L1 636 3068 -3794 2321 104 0 0 chr5 46090525 46090823 -156994709 + AluSg SINE Alu 1 298 -12 9727 144 46 8 chr5 46090823 46092124 -156993408 + L1PBa LINE L1 3068 4318 -2544 19249 122 24 22 chr5 46092226 46095547 -156989985 - L1P LINE L1 -2809 3337 11 1595 241 69 33 chr5 46096678 46097276 -156988256 + L1ME3A LINE L1 5540 6158 -12 944 195 126 58 chr5 46097354 46097631 -156987901 + AluJo SINE Alu 1 296 -6 351 290 0 21 chr5 46098784 46098877 -156986655 - MIR SINE MIR -102 106 16 390 277 54 0 chr5 46099343 46099473 -156986059 - L2 LINE L2 -1 3312 3176 998 189 16 0 chr5 46099687 46099872 -156985660 + MER5A DNA MER1_type 1 188 -1 323 320 21 72 chr5 46100756 46100950 -156984582 + L1ME LINE L1 5577 5760 -361 338 242 161 48 chr5 46102717 46102903 -156982629 + MIR SINE MIR 44 250 -12 291 269 0 0 chr5 46104371 46104449 -156981083 + MIR SINE MIR 185 262 0 24 77 0 0 chr5 46104532 46104584 -156980948 + AT_rich Low_complexity Low_complexity 1 52 0 227 273 105 17 chr5 46105559 46105731 -156979801 - L1ME4a LINE L1 -167 5954 5768 293 304 27 14 chr5 46105977 46106197 -156979335 + L1ME4a LINE L1 5556 5778 -343 315 308 109 6 chr5 46106279 46106435 -156979097 + L1ME4a LINE L1 5922 6093 -28 269 318 23 39 chr5 46106555 46106684 -156978848 - L2 LINE L2 -222 3050 2924 193 347 104 18 chr5 46106721 46106889 -156978643 - L2 LINE L2 -1342 1972 1820 1641 79 0 0 chr5 46106889 46107104 -156978428 + L1PA8 LINE L1 5955 6169 -3 193 347 104 18 chr5 46107104 46107272 -156978260 - L2 LINE L2 -1494 1820 1607 3837 178 17 20 chr5 46108631 46109491 -156976041 - L1MA8 LINE L1 -863 5283 4426 3798 160 74 13 chr5 46109489 46110326 -156975206 + L1MA8 LINE L1 5282 6169 -122 * 5433 130 43 6 chr5 46110512 46111623 -156973909 + L1MA8 LINE L1 5130 6284 -7 613 242 21 155 chr5 46111831 46112219 -156973313 + L3 LINE CR1 1108 1443 -134 1525 147 11 29 chr5 46112336 46112615 -156972917 - L1MC1 LINE L1 -2 6331 6058 360 316 22 29 chr5 46112618 46112754 -156972778 + MER5A DNA MER1_type 51 185 -4 215 361 0 0 chr5 46112746 46112807 -156972725 + L3 LINE CR1 1516 1576 -1 * 753 253 6 11 chr5 46112907 46113089 -156972443 - MIR SINE MIR -70 192 12 695 275 77 32 chr5 46113536 46113783 -156971749 + MIR SINE MIR 3 260 -2 23 0 0 0 chr5 46114569 46114592 -156970940 + AT_rich Low_complexity Low_complexity 1 23 0 1236 276 74 19 chr5 46116064 46116632 -156968900 + L1ME3A LINE L1 5309 5907 -263 2102 127 3 22 chr5 46116817 46117132 -156968400 + AluSx SINE Alu 1 309 -3 5671 114 3 0 chr5 46117838 46118516 -156967016 - L1PA15 LINE L1 0 6165 5490 189 0 0 0 chr5 46118516 46118537 -156966995 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5671 114 3 0 chr5 46118537 46118560 -156966972 - L1PA15 LINE L1 -675 5490 5469 1655 95 0 5 chr5 46118560 46118770 -156966762 - AluSq SINE Alu -99 214 6 5671 114 3 0 chr5 46118770 46119201 -156966331 - L1PA15 LINE L1 -696 5469 5058 2897 202 33 5 chr5 46119206 46119851 -156965681 - L1PA15 LINE L1 -1336 4810 4148 2025 110 3 17 chr5 46119935 46120226 -156965306 - AluSx SINE Alu -15 297 11 1664 101 0 22 chr5 46120517 46120745 -156964787 + AluSg/x SINE Alu 84 306 -6 1402 321 144 21 chr5 46122040 46122146 -156963386 + L2 LINE L2 189 281 -3033 1856 184 114 26 chr5 46122146 46122575 -156962957 + MLT1C LTR MaLR 1 467 0 1402 321 144 21 chr5 46122575 46123400 -156962132 + L2 LINE L2 281 1234 -2080 3259 299 157 15 chr5 46123413 46125104 -156960428 + L2 LINE L2 579 2509 -805 510 115 0 13 chr5 46126756 46126834 -156958698 - Tigger2 DNA MER2_type -2641 77 1 392 250 0 0 chr5 46126836 46126920 -156958612 - MIR SINE MIR -67 195 112 * 472 216 31 0 chr5 46126919 46127016 -156958516 + MER5A DNA MER1_type 13 112 -77 348 24 0 0 chr5 46127263 46127304 -156958228 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 357 359 0 18 chr5 46127362 46127529 -156958003 - MIR3 SINE MIR 0 208 45 1173 193 103 53 chr5 46128399 46128782 -156956750 + MLT2B1 LTR ERVL 1 363 -157 231 36 0 0 chr5 46128782 46128810 -156956722 + (TG)n Simple_repeat Simple_repeat 1 28 0 501 17 0 0 chr5 46128810 46128868 -156956664 + (TA)n Simple_repeat Simple_repeat 2 59 0 1173 193 103 53 chr5 46128868 46128920 -156956612 + MLT2B1 LTR ERVL 362 503 -17 610 271 111 69 chr5 46129763 46130302 -156955230 + L1M4 LINE L1 2740 3301 -2845 2270 75 0 50 chr5 46130484 46130802 -156954730 + AluY SINE Alu 1 302 -9 2748 56 0 0 chr5 46132347 46132689 -156952843 + L1PA5 LINE L1 5809 6150 -4 222 271 51 93 chr5 46132942 46133060 -156952472 - L2 LINE L2 -10 3303 3191 182 232 53 42 chr5 46134022 46134117 -156951415 + L2 LINE L2 1633 1728 -1586 422 253 0 10 chr5 46134402 46134501 -156951031 + Charlie2b DNA MER1_type 1041 1138 -1644 1146 225 106 26 chr5 46134574 46135218 -156950314 + Charlie2b DNA MER1_type 2080 2774 -8 289 279 51 46 chr5 46136116 46136268 -156949264 + LTR16A1 LTR ERVL 328 456 -1 259 372 54 27 chr5 46137003 46137261 -156948271 + HERV16 LTR ERVL 711 975 -4021 716 40 0 40 chr5 46137453 46137553 -156947979 + L1PA10 LINE L1 6069 6164 -4 2393 316 58 37 chr5 46137972 46139227 -156946305 + HERV16 LTR ERVL 3523 4804 -960 301 176 0 0 chr5 46139782 46139833 -156945699 - L1MC4 LINE L1 -1337 6705 6655 303 194 60 0 chr5 46139834 46139901 -156945631 - L1ME3 LINE L1 -11 6151 6081 426 352 87 5 chr5 46140018 46140237 -156945295 + L2 LINE L2 2570 2806 -508 248 360 118 55 chr5 46140253 46140542 -156944990 + L2 LINE L2 2966 3272 0 875 163 0 0 chr5 46140612 46140753 -156944779 + AluJb SINE Alu 1 141 -171 214 83 0 42 chr5 46140770 46140818 -156944714 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 421 238 54 27 chr5 46142519 46142666 -156942866 - MIR SINE MIR -66 196 46 483 292 35 12 chr5 46142697 46142868 -156942664 + MER5B DNA MER1_type 4 178 0 391 294 199 15 chr5 46143296 46143623 -156941909 - L2 LINE L2 -1042 2272 1886 9816 169 48 53 chr5 46143939 46147646 -156937886 + L1MA3 LINE L1 3500 5731 -574 225 267 0 17 chr5 46147646 46147706 -156937826 + MLT1F1 LTR MaLR 49 107 -460 9816 169 48 53 chr5 46147706 46148279 -156937253 + L1MA3 LINE L1 5731 6305 0 851 202 125 77 chr5 46149136 46149537 -156935995 + Charlie4a DNA MER1_type 83 502 -6 2312 80 0 3 chr5 46151366 46151667 -156933865 + AluY SINE Alu 1 300 -11 429 109 0 0 chr5 46151865 46151929 -156933603 + MSTA LTR MaLR 365 428 0 763 308 89 21 chr5 46151978 46152704 -156932828 - L2 LINE L2 -13 3300 2515 1856 111 63 0 chr5 46153182 46153462 -156932070 - AluSc SINE Alu 0 309 14 207 276 153 55 chr5 46153589 46153752 -156931780 + MER5A DNA MER1_type 7 185 -4 1189 183 139 33 chr5 46153852 46154125 -156931407 - AluJb SINE Alu 0 302 1 541 283 13 0 chr5 46154358 46154510 -156931022 + L1ME3A LINE L1 6007 6160 -10 579 246 52 72 chr5 46154586 46154881 -156930651 + L1ME LINE L1 5480 5788 -378 26 50 0 0 chr5 46155035 46155075 -156930457 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 46155087 46155110 -156930422 + AT_rich Low_complexity Low_complexity 1 23 0 227 184 0 0 chr5 46155177 46155215 -156930317 + U6 snRNA snRNA 2 39 -68 3182 61 2 9 chr5 46155255 46155679 -156929853 + L1PA8 LINE L1 5749 6169 -3 6888 25 0 0 chr5 46155693 46156507 -156929025 - L1PA3 LINE L1 -1066 5080 4267 7638 31 0 0 chr5 46156507 46157578 -156927954 + L1PA3 LINE L1 5085 6155 0 531 251 151 22 chr5 46157858 46158037 -156927495 - MIR SINE MIR -1 261 60 1981 126 27 10 chr5 46158098 46158391 -156927141 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 46158484 46158505 -156927027 + AT_rich Low_complexity Low_complexity 1 21 0 248 217 63 147 chr5 46158912 46159055 -156926477 - MIR3 SINE MIR -49 159 29 1774 147 0 39 chr5 46159495 46159804 -156925728 - AluJo SINE Alu 0 306 9 366 200 9 19 chr5 46160438 46160543 -156924989 + CT-rich Low_complexity Low_complexity 3 106 0 776 156 35 0 chr5 46161159 46161300 -156924232 + L1PA14 LINE L1 6015 6160 -1 5411 57 0 0 chr5 46362159 46362860 -156722672 + L1PA5 LINE L1 5446 6146 -8 3240 202 35 46 chr5 46362877 46363869 -156721663 + L1ME1 LINE L1 5189 6165 -1 22 56 0 0 chr5 46366376 46366412 -156719120 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 46366797 46366818 -156718714 + AT_rich Low_complexity Low_complexity 1 21 0 919 223 57 40 chr5 46368664 46368717 -156716815 - MIR SINE MIR -10 252 201 2457 86 0 0 chr5 46368717 46369018 -156716514 + AluSq SINE Alu 1 301 -12 919 223 57 40 chr5 46369018 46369211 -156716321 - MIR SINE MIR -61 201 2 940 216 19 10 chr5 46369248 46369456 -156716076 - MER20 DNA MER1_type -9 210 1 2274 85 10 3 chr5 46369552 46369845 -156715687 + AluSq SINE Alu 1 295 -18 1636 148 63 25 chr5 46369915 46370199 -156715333 + AluSx SINE Alu 11 305 -7 2077 113 10 3 chr5 46370230 46370522 -156715010 + AluSg SINE Alu 1 294 -16 1124 142 11 11 chr5 46370522 46370698 -156714834 + AluSg/x SINE Alu 134 309 -3 4157 177 42 17 chr5 46370862 46372224 -156713308 - L1MB8 LINE L1 -37 6141 4747 1622 264 25 29 chr5 46372361 46373066 -156712466 + L1M3d LINE L1 1 511 -5380 * 2865 163 69 23 chr5 46373055 46373437 -156712095 + L1MB1 LINE L1 4674 5037 -1158 235 0 28 28 chr5 46373437 46373473 -156712059 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2865 163 69 23 chr5 46373473 46373849 -156711683 + L1MB1 LINE L1 5037 5452 -743 906 75 8 0 chr5 46373853 46373973 -156711559 + AluSg/x SINE Alu 162 282 -28 6871 49 19 162 chr5 46373973 46375219 -156710313 + SVA Other Other 316 1383 -3 21 0 0 0 chr5 46375272 46375293 -156710239 + AT_rich Low_complexity Low_complexity 1 21 0 2560 160 46 14 chr5 46375293 46375347 -156710185 + L1MB1 LINE L1 5439 5490 -678 2268 110 0 0 chr5 46375347 46375648 -156709884 + AluSx SINE Alu 1 301 -11 2560 160 46 14 chr5 46375648 46376112 -156709420 + L1MB1 LINE L1 5490 5974 -194 2157 123 0 0 chr5 46376113 46376423 -156709109 + AluSg SINE Alu 1 310 0 2160 112 20 3 chr5 46376613 46376907 -156708625 - AluSx SINE Alu -13 299 1 768 189 8 0 chr5 46376914 46377046 -156708486 - FLAM_C SINE Alu 0 133 1 2591 43 3 0 chr5 46377544 46377844 -156707688 - AluY SINE Alu -10 301 1 309 167 24 12 chr5 46377903 46377987 -156707545 + (TA)n Simple_repeat Simple_repeat 2 86 0 31 0 0 0 chr5 46378407 46378438 -156707094 + AT_rich Low_complexity Low_complexity 1 31 0 2169 123 7 7 chr5 46379758 46380066 -156705466 + AluSx SINE Alu 1 308 -4 302 24 48 0 chr5 46380734 46380776 -156704756 + (TTAGGG)n Simple_repeat Simple_repeat 4 47 0 2002 127 0 3 chr5 46381447 46381764 -156703768 - AluSx SINE Alu 0 316 1 1149 80 53 84 chr5 46382175 46382400 -156703132 - L1MB3 LINE L1 -3 6180 5963 26 64 0 0 chr5 46382661 46382708 -156702824 + AT_rich Low_complexity Low_complexity 1 47 0 2035 124 50 16 chr5 46383148 46383511 -156702021 - THE1C LTR MaLR 0 375 1 1614 154 59 26 chr5 46383809 46384082 -156701450 - AluJo SINE Alu -30 282 1 2138 88 10 30 chr5 46384377 46384673 -156700859 - AluSx SINE Alu -22 290 1 745 192 19 13 chr5 46385068 46385224 -156700308 - MER58A DNA MER1_type -22 202 46 286 270 111 9 chr5 46385365 46385506 -156700026 + MER20B DNA MER1_type 56 213 -6 205 250 0 0 chr5 46385652 46385696 -156699836 + (CA)n Simple_repeat Simple_repeat 1 44 0 597 338 125 36 chr5 46386453 46387242 -156698290 - L2 LINE L2 -2 3311 2456 1100 301 183 8 chr5 46387424 46388041 -156697491 - L2 LINE L2 -1208 2106 1382 648 251 137 23 chr5 46388434 46388653 -156696879 - MIR SINE MIR -11 251 8 1901 153 0 13 chr5 46388777 46389077 -156696455 + AluSx SINE Alu 1 296 -16 2885 236 38 23 chr5 46389343 46389893 -156695639 - L1ME1 LINE L1 -5 6230 5654 2121 101 0 11 chr5 46389893 46390362 -156695170 + AluSx SINE Alu 1 466 0 2885 236 38 23 chr5 46390362 46390796 -156694736 - L1ME1 LINE L1 -581 5654 5228 1142 244 30 33 chr5 46390803 46391142 -156694390 - L1ME1 LINE L1 -1290 4925 4586 2547 135 61 10 chr5 46391142 46391549 -156693983 + MSTA LTR MaLR 1 428 0 1142 244 30 33 chr5 46391549 46391700 -156693832 - L1ME1 LINE L1 -1629 4586 4436 938 269 72 28 chr5 46391800 46392231 -156693301 - L1ME1 LINE L1 -4402 1994 1545 493 331 70 21 chr5 46392247 46392631 -156692901 + LTR16B LTR ERVL 62 464 0 1598 281 75 38 chr5 46392632 46393453 -156692079 - L1ME1 LINE L1 -5319 1077 215 2137 128 0 3 chr5 46393453 46393757 -156691775 + AluSx SINE Alu 1 303 -9 1598 281 75 38 chr5 46393757 46393886 -156691646 - L1ME1 LINE L1 -6181 215 92 182 36 0 36 chr5 46394063 46394091 -156691441 + (TAA)n Simple_repeat Simple_repeat 3 29 0 700 317 75 0 chr5 46394091 46394318 -156691214 - MIR SINE MIR -14 248 5 596 316 85 54 chr5 46394688 46395112 -156690420 - L2 LINE L2 -13 3300 2864 2112 128 0 3 chr5 46395238 46395527 -156690005 + AluSx SINE Alu 2 289 -23 21 0 0 0 chr5 46396234 46396255 -156689277 + AT_rich Low_complexity Low_complexity 1 21 0 563 247 123 34 chr5 46396691 46397164 -156688368 + L1MC4 LINE L1 7276 7914 -128 206 216 0 0 chr5 46397166 46397203 -156688329 + (TG)n Simple_repeat Simple_repeat 2 38 0 687 266 6 12 chr5 46397272 46397445 -156688087 - AluJb SINE Alu -12 300 129 195 42 0 0 chr5 46397478 46397502 -156688030 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 842 211 0 0 chr5 46397502 46397663 -156687869 - AluJo SINE Alu -32 280 120 408 321 24 0 chr5 46397728 46397896 -156687636 - L1 LINE L1 -1093 5053 4882 268 274 0 0 chr5 46397938 46398000 -156687532 + A-rich Low_complexity Low_complexity 1 62 0 2259 88 7 3 chr5 46398810 46399105 -156686427 - AluSp SINE Alu -17 296 1 1744 214 62 71 chr5 46399118 46399578 -156685954 + L1MC5 LINE L1 7116 7578 -383 2189 115 0 3 chr5 46399578 46399874 -156685658 - AluSq SINE Alu -18 295 1 1744 214 62 71 chr5 46399874 46399946 -156685586 + L1MC5 LINE L1 7578 7649 -312 2045 135 7 0 chr5 46399946 46400242 -156685290 - AluSx SINE Alu -13 299 2 1744 214 62 71 chr5 46400242 46400525 -156685007 + L1MC5 LINE L1 7649 7925 -36 1865 108 126 0 chr5 46400600 46400869 -156684663 + AluSx SINE Alu 1 303 -9 200 186 0 51 chr5 46401182 46401241 -156684291 + A-rich Low_complexity Low_complexity 3 58 0 14129 125 26 17 chr5 46401377 46401556 -156683976 - Tigger1 DNA MER2_type 0 2418 2242 2426 92 0 0 chr5 46401556 46401851 -156683681 + AluSg SINE Alu 2 296 -14 14129 125 26 17 chr5 46401851 46402035 -156683497 - Tigger1 DNA MER2_type -176 2242 2061 1506 183 48 35 chr5 46402035 46402324 -156683208 + AluJb SINE Alu 1 293 -19 14129 125 26 17 chr5 46402324 46403424 -156682108 - Tigger1 DNA MER2_type -357 2061 920 2433 85 0 3 chr5 46403424 46403731 -156681801 + AluSc SINE Alu 1 306 -3 14129 125 26 17 chr5 46403731 46404650 -156680882 - Tigger1 DNA MER2_type -1498 920 11 2324 106 3 3 chr5 46404830 46405142 -156680390 + AluSx SINE Alu 1 312 0 225 352 64 54 chr5 46405990 46406382 -156679150 - L2 LINE L2 -1738 1576 1181 737 198 71 61 chr5 46408268 46408480 -156677052 - MER20 DNA MER1_type -5 214 1 1912 200 86 103 chr5 46408498 46408706 -156676826 + Charlie1a DNA MER1_type 31 241 -2520 1836 121 89 0 chr5 46408706 46408988 -156676544 + AluJb SINE Alu 1 307 -5 1912 200 86 103 chr5 46408988 46409595 -156675937 + Charlie1a DNA MER1_type 241 832 -623 502 260 80 7 chr5 46409596 46409746 -156675786 + MLT1F LTR MaLR 1 161 -381 245 236 65 106 chr5 46409746 46409869 -156675663 + L1ME3A LINE L1 6029 6146 -24 2122 105 6 25 chr5 46410718 46411033 -156674499 - AluSq SINE Alu -4 309 1 302 297 135 11 chr5 46412911 46413177 -156672355 + L1MC4 LINE L1 7620 7918 -124 201 273 0 0 chr5 46413184 46413239 -156672293 + (TA)n Simple_repeat Simple_repeat 1 55 0 2096 104 10 3 chr5 46413736 46414025 -156671507 + AluSg SINE Alu 1 291 -19 559 280 90 5 chr5 46415095 46415284 -156670248 - MIR3 SINE MIR -1 207 3 781 146 0 24 chr5 46415696 46415819 -156669713 - FLAM_C SINE Alu -20 123 4 709 312 52 12 chr5 46417360 46417610 -156667922 - MIR SINE MIR 0 262 3 303 241 71 7 chr5 46417686 46417827 -156667705 + L1ME4a LINE L1 5971 6120 -1 225 155 84 28 chr5 46418254 46418325 -156667207 + MER116 DNA Mariner 1 75 -5 1560 162 9 70 chr5 46418461 46418789 -156666743 + AluJo SINE Alu 2 309 -3 732 157 0 0 chr5 46418802 46418910 -156666622 - FLAM_C SINE Alu -30 113 6 343 282 106 47 chr5 46418924 46419179 -156666353 - L1ME4a LINE L1 -1 6120 5851 35 54 0 0 chr5 46420229 46420285 -156665247 + AT_rich Low_complexity Low_complexity 1 56 0 180 0 0 0 chr5 46421622 46421642 -156663890 + (A)n Simple_repeat Simple_repeat 1 20 0 1852 164 0 16 chr5 46421915 46422226 -156663306 + AluSx SINE Alu 1 306 -6 2114 108 27 0 chr5 46422334 46422631 -156662901 - AluSx SINE Alu -7 305 1 67 42 0 0 chr5 46422670 46422765 -156662767 + AT_rich Low_complexity Low_complexity 1 95 0 22 35 0 0 chr5 46422933 46422962 -156662570 + AT_rich Low_complexity Low_complexity 1 29 0 1721 168 14 0 chr5 46422963 46423248 -156662284 + AluJo SINE Alu 1 289 -23 389 263 215 19 chr5 46423948 46424157 -156661375 - L2 LINE L2 -1 3312 3063 1643 183 7 3 chr5 46424387 46424672 -156660860 - AluJb SINE Alu -26 286 1 307 276 130 48 chr5 46425197 46425552 -156659980 + HAL1 LINE L1 2 385 -2122 684 286 136 40 chr5 46425594 46426247 -156659285 + HAL1 LINE L1 480 1195 -1312 198 0 0 0 chr5 46426290 46426312 -156659220 + (T)n Simple_repeat Simple_repeat 1 22 0 193 304 29 0 chr5 46426582 46426651 -156658881 + MIR3 SINE MIR 123 193 -15 406 307 62 34 chr5 46426846 46427022 -156658510 + MIR3 SINE MIR 22 202 -6 1739 288 131 4 chr5 46427286 46428263 -156657269 - L2 LINE L2 0 3313 2202 2400 87 0 0 chr5 46428757 46429055 -156656477 - AluSq SINE Alu -15 298 1 1977 118 7 36 chr5 46429394 46429533 -156655999 + AluSx SINE Alu 1 143 -169 2320 91 0 3 chr5 46429533 46429840 -156655692 + AluSq SINE Alu 1 306 -7 1977 118 7 36 chr5 46429840 46430004 -156655528 + AluSx SINE Alu 143 295 -17 332 248 39 31 chr5 46430277 46430406 -156655126 - L1ME1 LINE L1 -22 6144 6015 1824 159 0 43 chr5 46430515 46430841 -156654691 - AluJb SINE Alu 0 312 1 11402 127 32 31 chr5 46430947 46433030 -156652502 - Ricksha_c DNA DNA -13 2033 8 1039 247 157 22 chr5 46433056 46433558 -156651974 + HAL1 LINE L1 1648 2217 -290 221 266 89 13 chr5 46434082 46434161 -156651371 - L2 LINE L2 0 3272 3188 2284 82 3 10 chr5 46435221 46435514 -156650018 + AluSg SINE Alu 1 291 -19 525 288 45 49 chr5 46435633 46435876 -156649656 + MIR SINE MIR 21 262 0 581 206 71 8 chr5 46436497 46436623 -156648909 - MIR SINE MIR -109 153 20 327 73 0 55 chr5 46436823 46436878 -156648654 - L2 LINE L2 0 3313 3262 2203 80 0 11 chr5 46436969 46437287 -156648245 - AluSq SINE Alu 0 315 1 1323 221 47 55 chr5 46437399 46437585 -156647947 + MLT1C LTR MaLR 11 197 -270 342 0 0 0 chr5 46437585 46437623 -156647909 + (GA)n Simple_repeat Simple_repeat 2 39 0 1323 221 47 55 chr5 46437623 46437716 -156647816 + MLT1C LTR MaLR 197 289 -178 2359 94 0 0 chr5 46437716 46438013 -156647519 + AluSx SINE Alu 1 297 -15 1323 221 47 55 chr5 46438013 46438184 -156647348 + MLT1C LTR MaLR 289 458 -9 925 156 7 7 chr5 46438201 46438401 -156647131 + L1MDb LINE L1 1141 1634 -4693 1819 159 3 52 chr5 46438401 46438728 -156646804 + AluSx SINE Alu 1 311 -1 1287 241 48 22 chr5 46438728 46438925 -156646607 + L1MA6 LINE L1 2983 3173 -4392 2259 81 3 0 chr5 46438925 46439238 -156646294 + AluSp SINE Alu 1 314 0 1287 241 48 22 chr5 46439238 46439817 -156645715 + L1MA6 LINE L1 3173 3785 -3780 2597 173 23 19 chr5 46439817 46440309 -156645223 + L1MA6 LINE L1 6114 6610 -955 1999 118 10 0 chr5 46440309 46440597 -156644935 + AluSg SINE Alu 19 309 -1 2597 173 23 19 chr5 46440597 46440670 -156644862 + L1MA6 LINE L1 6610 6681 -884 2177 139 0 0 chr5 46440670 46440979 -156644553 + AluJb SINE Alu 1 309 -3 1761 141 32 0 chr5 46440979 46441292 -156644240 + L1MA6 LINE L1 6784 7106 -604 1766 165 46 14 chr5 46441295 46441665 -156643867 + L1MA6 LINE L1 7335 7716 -3 2381 83 0 3 chr5 46442264 46442586 -156642946 - AluSc SINE Alu 0 309 1 336 284 193 0 chr5 46442642 46442802 -156642730 - MIR3 SINE MIR -65 197 3 307 252 41 81 chr5 46443514 46443637 -156641895 - L1ME3A LINE L1 -88 6082 5965 487 264 174 35 chr5 46443922 46444289 -156641243 - L1MC4a LINE L1 -1867 5941 5524 260 356 0 0 chr5 46444286 46444418 -156641114 - L1ME3A LINE L1 -217 5953 5822 * 2362 101 0 16 chr5 46444528 46444844 -156640688 + AluSq SINE Alu 1 311 -2 2213 93 7 3 chr5 46445576 46445865 -156639667 + AluSq SINE Alu 9 298 -15 2139 152 13 9 chr5 46445865 46446494 -156639038 - L1PB1 LINE L1 -624 5527 4898 3843 107 40 16 chr5 46446494 46446749 -156638783 + L1PB1 LINE L1 5512 5759 -392 468 51 0 0 chr5 46446749 46446808 -156638724 + (CA)n Simple_repeat Simple_repeat 2 60 0 3843 107 40 16 chr5 46446808 46447174 -156638358 + L1PB1 LINE L1 5759 6150 -1 231 214 0 0 chr5 46447442 46447484 -156638048 + MLT1L LTR MaLR 569 610 -5 2268 109 3 6 chr5 46447807 46448120 -156637412 + AluSx SINE Alu 1 312 0 839 108 0 0 chr5 46448867 46448987 -156636545 - L1PB3 LINE L1 -2 6152 6033 180 0 0 0 chr5 46449633 46449653 -156635879 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 230 214 43 0 chr5 46449972 46450042 -156635490 + G-rich Low_complexity Low_complexity 4 76 0 225 283 17 0 chr5 46451981 46452041 -156633491 - L3 LINE CR1 -2 1575 1515 6546 71 20 36 chr5 46452160 46453339 -156632193 + SVA Other Other 432 1383 -3 27 0 0 0 chr5 46453339 46453366 -156632166 + AT_rich Low_complexity Low_complexity 1 27 0 1550 192 3 20 chr5 46453805 46454102 -156631430 - AluJo SINE Alu -20 292 1 2208 131 3 0 chr5 46454148 46454453 -156631079 + AluSp SINE Alu 1 306 -7 277 213 16 0 chr5 46454746 46454807 -156630725 - L3 LINE CR1 -561 1016 955 203 338 62 0 chr5 46454825 46454905 -156630627 - L2 LINE L2 -20 3293 3209 1141 202 0 31 chr5 46454947 46455175 -156630357 + AluJo SINE Alu 84 304 -8 2052 146 3 3 chr5 46455313 46455621 -156629911 + AluJb SINE Alu 3 310 -2 2160 112 7 3 chr5 46455621 46455916 -156629616 + AluSx SINE Alu 1 296 -16 2274 90 7 0 chr5 46456007 46456306 -156629226 + AluSx SINE Alu 1 301 -11 2303 100 0 0 chr5 46456884 46457184 -156628348 - AluY SINE Alu -11 300 1 2338 88 0 7 chr5 46457284 46457591 -156627941 + AluSc SINE Alu 1 305 -4 1123 133 0 0 chr5 46457685 46457873 -156627659 + L1MA4A LINE L1 6109 6296 -7 21 0 0 0 chr5 46457876 46457897 -156627635 + AT_rich Low_complexity Low_complexity 1 21 0 1544 179 18 7 chr5 46458186 46458465 -156627067 - AluJb SINE Alu -30 282 1 2189 102 0 3 chr5 46458554 46458848 -156626684 - AluSg SINE Alu -6 304 12 2065 95 27 20 chr5 46459376 46459670 -156625862 + AluY SINE Alu 1 296 -15 1977 150 3 0 chr5 46460261 46460567 -156624965 - AluSx SINE Alu -5 307 1 1149 163 24 20 chr5 46460578 46460830 -156624702 - L1MC3 LINE L1 0 7785 7533 285 51 0 0 chr5 46460830 46460869 -156624663 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1967 108 4 11 chr5 46460877 46461154 -156624378 - AluSg SINE Alu -35 275 1 1255 193 84 36 chr5 46461170 46461502 -156624030 + MLT1A1 LTR MaLR 1 348 -17 3417 196 31 29 chr5 46461576 46462306 -156623226 - MER21B LTR ERV1 -113 750 19 331 321 15 22 chr5 46462325 46462459 -156623073 - L1MC4 LINE L1 -1296 6746 6614 2404 66 3 0 chr5 46462464 46462752 -156622780 - AluSp SINE Alu -24 289 1 4413 145 37 90 chr5 46462804 46463732 -156621800 - L1MC3 LINE L1 -265 7520 6544 2252 141 28 17 chr5 46463732 46464093 -156621439 - MLT1A1 LTR MaLR 0 365 1 4413 145 37 90 chr5 46464093 46464484 -156621048 - L1MC3 LINE L1 -1241 6544 6134 1968 146 0 13 chr5 46464484 46464799 -156620733 - AluJb SINE Alu -1 311 1 2430 78 3 7 chr5 46464808 46465114 -156620418 - AluSp SINE Alu -8 305 1 4413 145 37 90 chr5 46465114 46465222 -156620310 - L1MC3 LINE L1 -1659 6126 6014 2788 163 59 0 chr5 46465222 46465712 -156619820 - LTR53 LTR ERVL 0 519 1 4413 145 37 90 chr5 46465712 46465742 -156619790 - L1MC3 LINE L1 -1771 6014 5984 1909 171 0 3 chr5 46465742 46466041 -156619491 - AluJb SINE Alu -14 298 1 4413 145 37 90 chr5 46466041 46466340 -156619192 - L1MC3 LINE L1 -1801 5984 5840 2243 106 0 7 chr5 46466508 46466801 -156618731 - AluSc SINE Alu -18 291 1 1836 193 37 3 chr5 46466948 46467301 -156618231 + MLT1A1 LTR MaLR 1 365 0 1597 224 47 62 chr5 46467601 46468154 -156617378 - HAL1 LINE L1 -440 2067 1523 309 156 177 0 chr5 46468166 46468263 -156617269 - L1ME1 LINE L1 0 6184 6072 255 170 0 0 chr5 46468266 46468313 -156617219 + (TA)n Simple_repeat Simple_repeat 2 48 0 844 150 23 0 chr5 46468318 46468451 -156617081 - AluJb SINE Alu -176 136 1 357 222 0 127 chr5 46468452 46468494 -156617038 - L1ME1 LINE L1 -48 6118 6072 2320 100 10 0 chr5 46468494 46468803 -156616729 + AluSp SINE Alu 1 312 -1 357 222 0 127 chr5 46468803 46468886 -156616646 - L1ME1 LINE L1 -94 6072 6009 334 158 0 0 chr5 46468882 46468939 -156616593 - L1MC4 LINE L1 -2075 5967 5911 * 553 186 0 0 chr5 46468940 46469026 -156616506 + AluSx SINE Alu 2 87 -226 2176 112 7 0 chr5 46469026 46469320 -156616212 + AluSx SINE Alu 1 296 -16 1666 113 0 21 chr5 46469321 46469560 -156615972 + AluSx SINE Alu 74 307 -3 2299 173 77 62 chr5 46469567 46469896 -156615636 - L1ME1 LINE L1 -258 5908 5565 2898 95 28 5 chr5 46469896 46470329 -156615203 - L1PB2 LINE L1 -1 6150 5708 2299 173 77 62 chr5 46470329 46470582 -156614950 - L1ME1 LINE L1 -601 5565 5317 2448 62 0 33 chr5 46470597 46470903 -156614629 + AluY SINE Alu 1 296 -15 584 126 136 0 chr5 46470905 46471008 -156614524 - AluSc SINE Alu 0 309 193 786 186 122 30 chr5 46471035 46471272 -156614260 - L1ME1 LINE L1 -904 5242 4984 26 0 0 0 chr5 46471296 46471322 -156614210 + AT_rich Low_complexity Low_complexity 1 26 0 1085 178 38 2 chr5 46471388 46471610 -156613922 - L1ME1 LINE L1 -1181 4965 4740 180 0 0 0 chr5 46471623 46471643 -156613889 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2425 81 19 3 chr5 46471746 46472053 -156613479 - AluSq SINE Alu -1 312 1 1758 104 65 11 chr5 46472059 46472319 -156613213 - AluSq SINE Alu -39 274 1 1921 171 13 0 chr5 46472354 46472658 -156612874 - AluJb SINE Alu 0 312 5 373 115 0 0 chr5 46473176 46473228 -156612304 - MLT1A1 LTR MaLR -2 363 312 2236 169 61 2 chr5 46473230 46473626 -156611906 - MSTB LTR MaLR -4 422 4 794 175 31 135 chr5 46473647 46474026 -156611506 - MLT1A1 LTR MaLR -38 358 21 1030 202 112 25 chr5 46474029 46474122 -156611410 + MSTD LTR MaLR 2 85 -311 2026 139 3 3 chr5 46474122 46474424 -156611108 + AluSx SINE Alu 1 302 -10 1030 202 112 25 chr5 46474424 46474658 -156610874 + MSTD LTR MaLR 85 396 0 2407 85 3 7 chr5 46474714 46475020 -156610512 + AluSp SINE Alu 1 305 -8 675 239 100 17 chr5 46475263 46475493 -156610039 + LTR41 LTR ERVL 521 769 -4 2062 128 0 3 chr5 46475642 46475932 -156609600 - AluSx SINE Alu -23 289 1 2150 96 7 7 chr5 46476350 46476632 -156608900 - AluSg SINE Alu -28 282 1 1983 129 14 10 chr5 46477244 46477539 -156607993 - AluSx SINE Alu -16 296 1 27 29 0 0 chr5 46477863 46477897 -156607635 + AT_rich Low_complexity Low_complexity 1 34 0 1702 154 28 18 chr5 46478320 46478605 -156606927 - AluJb SINE Alu -23 289 2 906 159 92 0 chr5 46479260 46479423 -156606109 - AluSg/x SINE Alu -17 293 116 326 280 28 9 chr5 46479883 46479990 -156605542 + L2 LINE L2 3204 3312 -1 239 240 115 31 chr5 46480324 46480420 -156605112 + L2 LINE L2 3209 3312 -1 1770 89 0 13 chr5 46481267 46481502 -156604030 - AluSp SINE Alu -81 232 1 719 175 0 0 chr5 46481832 46481946 -156603586 + AluJb SINE Alu 5 118 -194 2181 120 3 0 chr5 46482004 46482296 -156603236 - AluSc SINE Alu -16 293 1 1232 124 10 161 chr5 46482467 46482758 -156602774 + AluYb8 SINE Alu 1 247 -71 501 178 22 0 chr5 46484753 46484843 -156600689 + MER20 DNA MER1_type 107 198 -21 1220 174 12 21 chr5 46485331 46485573 -156599959 + AluJb SINE Alu 64 303 -9 192 158 0 0 chr5 46486988 46487026 -156598506 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1813 144 3 19 chr5 46487438 46487751 -156597781 + AluJb SINE Alu 1 308 -4 531 215 69 24 chr5 46487751 46487873 -156597659 - MLT1D LTR MaLR -129 376 266 1681 154 55 33 chr5 46487873 46488203 -156597329 - MER44D DNA MER2_type -2 607 1 531 215 69 24 chr5 46488203 46488229 -156597303 - MLT1D LTR MaLR -239 266 243 416 204 97 0 chr5 46488268 46488361 -156597171 - AluSg SINE Alu -181 129 28 520 218 58 78 chr5 46488362 46488568 -156596964 - MLT1D LTR MaLR -302 203 2 2169 102 3 16 chr5 46488880 46489185 -156596347 - AluSx SINE Alu -11 301 1 440 66 79 0 chr5 46489439 46489515 -156596017 - Tigger7 DNA MER2_type -95 2392 2311 678 116 11 0 chr5 46489516 46489611 -156595921 + AluS SINE Alu 2 97 -216 2441 72 3 0 chr5 46489835 46490128 -156595404 - AluSp SINE Alu -19 294 1 811 129 73 0 chr5 46490152 46490276 -156595256 + AluJo/FLAM SINE Alu 1 133 -179 1737 174 3 14 chr5 46490279 46490572 -156594960 + AluJo SINE Alu 13 302 -10 446 149 107 38 chr5 46490873 46491088 -156594444 + L1MA7 LINE L1 5961 6291 0 1433 159 17 21 chr5 46491180 46491413 -156594119 - AluJo SINE Alu -80 232 1 357 275 92 84 chr5 46491589 46491960 -156593572 - L1ME3A LINE L1 -233 5937 5693 26 74 0 0 chr5 46491972 46492026 -156593506 + AT_rich Low_complexity Low_complexity 1 54 0 685 254 115 72 chr5 46492035 46492135 -156593397 - L1MC4a LINE L1 -70 6051 5957 184 57 29 29 chr5 46492135 46492170 -156593362 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 685 254 115 72 chr5 46492170 46492572 -156592960 - L1MC4a LINE L1 -164 5957 5527 196 241 38 51 chr5 46492576 46492655 -156592877 - L2 LINE L2 -186 3086 3009 2277 118 0 0 chr5 46494266 46494572 -156590960 + AluSq SINE Alu 1 306 -7 1791 154 39 0 chr5 46495762 46496041 -156589491 - AluJb SINE Alu -22 290 1 1971 143 84 84 chr5 46496237 46496376 -156589156 - MLT1C LTR MaLR 0 467 329 2190 114 10 0 chr5 46496376 46496675 -156588857 - AluSx SINE Alu -8 304 3 1971 143 84 84 chr5 46496675 46496998 -156588534 - MLT1C LTR MaLR -137 330 5 23 0 0 0 chr5 46497056 46497079 -156588453 + AT_rich Low_complexity Low_complexity 1 23 0 375 106 0 17 chr5 46497250 46497322 -156588210 - AluJb SINE Alu -188 114 65 265 223 128 21 chr5 46497324 46497418 -156588114 - MLT1I LTR MaLR -25 384 281 261 175 48 14 chr5 46497393 46497505 -156588027 - MLT1H LTR MaLR -104 445 256 * 2463 87 0 0 chr5 46497525 46497824 -156587708 - AluSx SINE Alu -13 299 1 576 200 111 93 chr5 46497887 46497956 -156587576 - MLT1H LTR MaLR -318 231 165 1682 191 90 40 chr5 46497956 46498401 -156587131 - MLT1C LTR MaLR 0 467 1 576 200 111 93 chr5 46498401 46498556 -156586976 - MLT1H LTR MaLR -384 165 3 1413 266 128 35 chr5 46498917 46499719 -156585813 - L1ME LINE L1 -4448 1632 715 1893 154 3 23 chr5 46499719 46500024 -156585508 - AluJb SINE Alu -13 299 1 1413 266 128 35 chr5 46500024 46500325 -156585207 - L1ME LINE L1 -5365 715 443 1956 108 63 28 chr5 46500519 46500805 -156584727 - AluSq SINE Alu -17 296 1 1761 165 7 20 chr5 46501202 46501499 -156584033 + AluJb SINE Alu 1 293 -19 2397 84 0 7 chr5 46501641 46501949 -156583583 + AluSc SINE Alu 1 306 -3 2149 96 16 32 chr5 46501949 46502262 -156583270 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr5 46502294 46502325 -156583207 + AT_rich Low_complexity Low_complexity 1 31 0 414 283 50 30 chr5 46502362 46502560 -156582972 + L1MC4a LINE L1 5732 5933 -1875 2154 110 14 3 chr5 46502567 46502858 -156582674 + AluSx SINE Alu 1 294 -18 1797 135 23 0 chr5 46503056 46503316 -156582216 + AluSx SINE Alu 1 266 -46 1241 173 153 4 chr5 46503377 46503631 -156581901 + AluJo SINE Alu 1 292 -20 2263 108 3 0 chr5 46506107 46506404 -156579128 - AluSp SINE Alu -15 298 1 1739 123 54 90 chr5 46506900 46507062 -156578470 + THE1C LTR MaLR 1 167 -208 1944 165 7 0 chr5 46507062 46507359 -156578173 - AluSx SINE Alu -13 299 1 1739 123 54 90 chr5 46507359 46507543 -156577989 + THE1C LTR MaLR 167 334 -41 2256 97 0 17 chr5 46507543 46507843 -156577689 - AluSg SINE Alu -15 295 1 1739 123 54 90 chr5 46507843 46507884 -156577648 + THE1C LTR MaLR 334 375 0 6628 21 12 8 chr5 46507985 46508762 -156576770 - L1PA2 LINE L1 0 6155 5376 21 0 0 0 chr5 46508920 46508941 -156576591 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 46509093 46509114 -156576418 + AT_rich Low_complexity Low_complexity 1 21 0 2283 92 7 7 chr5 46509313 46509616 -156575916 - AluSx SINE Alu -9 303 1 656 267 61 0 chr5 46509821 46509986 -156575546 - LTR33 LTR ERVL -344 177 3 191 314 14 0 chr5 46510036 46510106 -156575426 - L2 LINE L2 -1 3312 3242 1600 160 80 3 chr5 46510227 46510515 -156575017 + AluJo SINE Alu 1 310 -2 2071 96 25 11 chr5 46510527 46510807 -156574725 - AluSx SINE Alu -15 297 14 2090 135 0 3 chr5 46511037 46511349 -156574183 + AluSx SINE Alu 1 311 -1 745 113 0 0 chr5 46511487 46511593 -156573939 - FLAM_C SINE Alu -36 107 2 21 57 0 0 chr5 46511648 46511683 -156573849 + AT_rich Low_complexity Low_complexity 1 35 0 421 273 68 74 chr5 46512104 46512497 -156573035 - MLT1J LTR MaLR -43 468 38 1705 180 0 4 chr5 46512551 46512849 -156572683 + AluJb SINE Alu 12 308 0 414 202 0 22 chr5 46513091 46513180 -156572352 + MER65A LTR ERV1 1 87 -358 2403 83 0 3 chr5 46513181 46513481 -156572051 + AluSx SINE Alu 1 299 -13 764 142 8 0 chr5 46513502 46513622 -156571910 + AluSq/x SINE Alu 4 124 -189 2092 151 60 5 chr5 46513623 46513993 -156571539 + MER65A LTR ERV1 56 445 0 2160 98 3 64 chr5 46514104 46514432 -156571100 - AluSg SINE Alu -2 308 1 1653 109 27 16 chr5 46514443 46514700 -156570832 - AluSx SINE Alu -3 309 50 2416 77 3 13 chr5 46514724 46515034 -156570498 - AluY SINE Alu -4 307 1 2154 116 3 7 chr5 46515084 46515385 -156570147 + AluSx SINE Alu 1 300 -12 404 268 31 16 chr5 46515392 46515519 -156570013 - MER5A DNA MER1_type 0 189 61 803 142 24 8 chr5 46515538 46515665 -156569867 - AluJo SINE Alu -177 135 7 4608 92 58 59 chr5 46515894 46516947 -156568585 + MER11A LTR ERVK 1 1266 0 2131 112 7 3 chr5 46517364 46517650 -156567882 + AluSx SINE Alu 1 287 -25 975 299 70 19 chr5 46518364 46518776 -156566756 + LTR16B LTR ERVL 32 464 0 756 205 141 91 chr5 46518961 46519224 -156566308 - LTR1B LTR ERV1 -237 589 314 3874 95 40 0 chr5 46519429 46519957 -156565575 + MER41A LTR ERV1 6 554 0 293 234 37 37 chr5 46519958 46520065 -156565467 - LTR1B LTR ERV1 -681 145 39 1891 148 3 3 chr5 46520127 46520434 -156565098 - AluSx SINE Alu 0 307 1 360 200 120 0 chr5 46520556 46520631 -156564901 + LTR8 LTR ERV1 1 84 -607 2013 140 13 10 chr5 46520639 46520946 -156564586 - AluSx SINE Alu -4 308 1 295 222 242 33 chr5 46521014 46521167 -156564365 - MER5A DNA MER1_type -1 188 4 670 233 23 17 chr5 46521178 46521354 -156564178 - MER5B DNA MER1_type 0 178 2 2307 110 3 0 chr5 46521359 46521659 -156563873 + AluSx SINE Alu 1 301 -11 295 250 10 30 chr5 46521746 46521846 -156563686 + GA-rich Low_complexity Low_complexity 2 99 0 4182 155 11 16 chr5 46522267 46522969 -156562563 - LTR34 LTR ERV1 0 699 1 767 215 98 107 chr5 46522977 46523149 -156562383 - LTR8A LTR ERV1 -4 723 551 1862 159 0 13 chr5 46523149 46523451 -156562081 - AluJb SINE Alu -13 299 2 767 215 98 107 chr5 46523451 46523719 -156561813 - LTR8A LTR ERV1 -176 551 287 346 135 0 0 chr5 46523766 46523818 -156561714 + AluSx SINE Alu 1 52 -248 2717 140 46 64 chr5 46523818 46524317 -156561215 + LTR2B LTR ERV1 1 490 0 1730 119 4 0 chr5 46524317 46524561 -156560971 + AluSx SINE Alu 49 293 -19 1889 165 23 0 chr5 46524747 46525050 -156560482 + AluSx SINE Alu 1 310 -2 641 311 106 49 chr5 46525514 46526061 -156559471 + L2 LINE L2 2117 2694 -620 991 183 12 0 chr5 46526108 46526272 -156559260 + FRAM SINE Alu 1 158 -18 2403 101 0 0 chr5 46526276 46526608 -156558924 + AluSc SINE Alu 1 332 0 310 282 50 54 chr5 46526655 46526914 -156558618 - L1MC5 LINE L1 -64 7897 7640 624 277 25 9 chr5 46527033 46527262 -156558270 - L1MC5 LINE L1 -398 7410 7269 1794 163 7 3 chr5 46527422 46527742 -156557790 + AluJb SINE Alu 1 321 0 2182 103 4 0 chr5 46527916 46528197 -156557335 + AluSq SINE Alu 2 283 -30 1966 121 4 4 chr5 46528197 46528477 -156557055 + AluSg SINE Alu 24 303 -7 24 0 0 0 chr5 46528486 46528510 -156557022 + AT_rich Low_complexity Low_complexity 1 24 0 403 194 0 0 chr5 46528921 46528988 -156556544 + MER5A DNA MER1_type 9 75 -114 2032 154 118 90 chr5 46529000 46529533 -156555999 - LTR10A LTR ERV1 -61 548 1 2167 105 3 3 chr5 46529701 46530006 -156555526 - AluY SINE Alu -6 305 1 2256 93 3 3 chr5 46530410 46530701 -156554831 + AluSx SINE Alu 1 291 -21 233 326 80 7 chr5 46530721 46530859 -156554673 - MIR SINE MIR -26 236 89 4734 54 2 24 chr5 46531388 46531446 -156554086 - LTR8 LTR ERV1 -108 583 525 2227 116 3 0 chr5 46531446 46531757 -156553775 - AluSx SINE Alu 0 312 1 4734 54 2 24 chr5 46531757 46532294 -156553238 - LTR8 LTR ERV1 -166 525 1 309 50 0 0 chr5 46532294 46532334 -156553198 - HUERS-P1 LTR ERV1 0 6263 6224 344 325 67 34 chr5 46532391 46532502 -156553030 + L1MC/D LINE L1 5492 5598 -574 2186 134 0 0 chr5 46532502 46532807 -156552725 + AluSx SINE Alu 1 305 -7 344 325 67 34 chr5 46532807 46532990 -156552542 + L1MC/D LINE L1 5598 5806 -366 2423 82 76 0 chr5 46532992 46533322 -156552210 + THE1A LTR MaLR 1 355 0 11699 98 10 1 chr5 46533322 46534888 -156550644 + THE1A-int LTR MaLR 1 1580 0 2291 98 76 0 chr5 46534888 46535216 -156550316 + THE1A LTR MaLR 1 353 -2 478 339 45 22 chr5 46535664 46535888 -156549644 - MIR SINE MIR 0 262 34 265 267 0 0 chr5 46535965 46536025 -156549507 + MIR SINE MIR 194 253 -9 2032 147 10 0 chr5 46536043 46536349 -156549183 - AluSx SINE Alu -3 309 1 476 248 0 0 chr5 46536479 46536584 -156548948 + L2 LINE L2 3195 3299 -14 1793 172 11 0 chr5 46536807 46537092 -156548440 + AluSx SINE Alu 1 288 -24 2249 109 3 3 chr5 46537120 46537422 -156548110 - AluSq SINE Alu -11 302 1 2391 101 0 0 chr5 46537433 46537740 -156547792 - AluSq SINE Alu -6 307 1 1774 159 13 22 chr5 46537744 46538059 -156547473 - AluJo SINE Alu 0 312 1 2378 168 21 14 chr5 46538379 46538801 -156546731 + MSTB LTR MaLR 1 425 -1 852 285 44 4 chr5 46539844 46540114 -156545418 - L2 LINE L2 -1727 1587 1307 1912 163 7 0 chr5 46540484 46540778 -156544754 - AluSx SINE Alu -16 296 1 607 262 226 0 chr5 46540921 46541196 -156544336 - L2 LINE L2 -1776 1538 1202 342 115 0 0 chr5 46541409 46541470 -156544062 + (TC)n Simple_repeat Simple_repeat 1 61 0 243 140 0 0 chr5 46541469 46541519 -156544013 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 2294 102 10 0 chr5 46541575 46541878 -156543654 - AluSq SINE Alu -7 306 1 6182 217 32 33 chr5 46541995 46542458 -156543074 + L1M4 LINE L1 3577 4039 -2107 2483 55 3 0 chr5 46542458 46542747 -156542785 + AluY SINE Alu 5 294 -17 6182 217 32 33 chr5 46542747 46542873 -156542659 + L1M4 LINE L1 4039 4164 -1982 207 0 0 0 chr5 46542873 46542896 -156542636 + (GA)n Simple_repeat Simple_repeat 2 24 0 6182 217 32 33 chr5 46542896 46543086 -156542446 + L1M4 LINE L1 4164 4353 -1793 2177 125 0 0 chr5 46543086 46543382 -156542150 - AluSx SINE Alu -16 296 1 6182 217 32 33 chr5 46543382 46544251 -156541281 + L1M4 LINE L1 4353 5226 -920 648 234 0 28 chr5 46544251 46544392 -156541140 + Tigger1 DNA MER2_type 1 137 -2281 1941 158 0 0 chr5 46544429 46544713 -156540819 - AluSx SINE Alu -28 284 1 5302 187 61 5 chr5 46544713 46545872 -156539660 - L1M1 LINE L1 -4065 1263 223 6833 60 7 13 chr5 46545974 46546679 -156538853 - L1P LINE L1 -1212 4934 4226 333 0 0 0 chr5 46546679 46546716 -156538816 + (TA)n Simple_repeat Simple_repeat 2 38 0 838 31 0 0 chr5 46546718 46546815 -156538717 - L1PA5 LINE L1 -6 6148 6052 6833 60 7 13 chr5 46546815 46547003 -156538529 - L1P LINE L1 -1921 4225 4044 9013 81 12 1 chr5 46547004 46548233 -156537299 - L1M1 LINE L1 -3304 3024 1782 984 164 52 65 chr5 46548869 46549101 -156536431 - L1M1 LINE L1 -5090 238 10 1764 164 3 30 chr5 46549559 46549863 -156535669 - AluJo SINE Alu -9 303 8 9497 144 22 23 chr5 46549888 46551500 -156534032 + L1P LINE L1 3 1613 -4533 1352 166 0 23 chr5 46551605 46551822 -156533710 - AluSx SINE Alu -100 212 1 30 69 0 0 chr5 46551847 46551905 -156533627 + AT_rich Low_complexity Low_complexity 1 58 0 511 235 81 105 chr5 46551964 46552273 -156533259 - L1MC4a LINE L1 -1717 6091 5791 1738 167 20 10 chr5 46552273 46552566 -156532966 + AluSx SINE Alu 5 300 -12 511 235 81 105 chr5 46552566 46552626 -156532906 - L1MC4a LINE L1 -2017 5791 5731 2259 120 3 0 chr5 46552630 46552938 -156532594 - AluSx SINE Alu -3 309 1 216 0 0 0 chr5 46552944 46552968 -156532564 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1622 186 0 7 chr5 46552976 46553251 -156532281 - AluJo SINE Alu -39 273 1 376 296 41 29 chr5 46553272 46553444 -156532088 - MIR SINE MIR -1 261 88 1786 159 0 11 chr5 46553509 46553792 -156531740 + AluJb SINE Alu 32 311 -1 1483 150 4 39 chr5 46553935 46554195 -156531337 - AluSg SINE Alu -4 306 56 814 103 0 0 chr5 46554400 46554507 -156531025 + FLAM_C SINE Alu 1 107 -36 2078 138 0 3 chr5 46554645 46554957 -156530575 - AluSx SINE Alu -1 311 1 2098 97 25 7 chr5 46555189 46555467 -156530065 + AluSx SINE Alu 14 296 -16 1600 160 80 3 chr5 46555479 46555767 -156529765 - AluJo SINE Alu -2 310 1 191 314 14 0 chr5 46555888 46555958 -156529574 + L2 LINE L2 3242 3312 -1 629 273 61 0 chr5 46556008 46556173 -156529359 + LTR33 LTR ERVL 3 177 -344 2387 91 0 7 chr5 46556378 46556685 -156528847 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 46556885 46556906 -156528626 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 46557058 46557079 -156528453 + AT_rich Low_complexity Low_complexity 1 21 0 6090 55 3 1 chr5 46557260 46558011 -156527521 + L1PA6 LINE L1 5400 6151 -3 1667 123 102 25 chr5 46560337 46560621 -156524911 - AluSg SINE Alu -4 306 1 1038 161 72 21 chr5 46560626 46560819 -156524713 - AluJo SINE Alu 0 312 110 1071 274 65 71 chr5 46561480 46561721 -156523811 + LTR16C LTR ERVL 1 242 -249 1732 150 0 70 chr5 46561721 46562048 -156523484 - AluSx SINE Alu -8 304 1 1071 274 65 71 chr5 46562048 46562298 -156523234 + LTR16C LTR ERVL 242 489 -2 2311 102 0 7 chr5 46562721 46563025 -156522507 - AluSg SINE Alu -8 302 1 22 0 0 0 chr5 46564855 46564877 -156520655 + AT_rich Low_complexity Low_complexity 1 22 0 1171 105 0 6 chr5 46564915 46565087 -156520445 + L1PA16 LINE L1 5806 5976 -190 402 121 0 0 chr5 46565087 46565153 -156520379 + Alu SINE Alu 239 304 -5 22 0 0 0 chr5 46565376 46565398 -156520134 + AT_rich Low_complexity Low_complexity 1 22 0 332 180 16 0 chr5 46565403 46565464 -156520068 - U7 snRNA snRNA 0 63 2 274 231 0 15 chr5 46565995 46566060 -156519472 - MLT2F LTR ERVL -599 64 1 2302 97 0 34 chr5 46566063 46566384 -156519148 - AluSg SINE Alu 0 310 1 1559 170 79 4 chr5 46566730 46566995 -156518537 - AluJb SINE Alu -27 285 1 4039 125 5 3 chr5 46567142 46567766 -156517766 - L1PB4 LINE L1 -3 6153 5529 856 183 0 14 chr5 46567849 46567991 -156517541 - FRAM SINE Alu -30 146 7 22 56 0 0 chr5 46567994 46568030 -156517502 + AT_rich Low_complexity Low_complexity 1 36 0 2139 123 0 0 chr5 46568030 46568315 -156517217 - AluY SINE Alu -26 285 1 857 173 0 0 chr5 46568338 46568465 -156517067 - FLAM_C SINE Alu -16 127 1 1899 148 101 3 chr5 46568466 46568635 -156516897 - L1PB4 LINE L1 -666 5490 5339 186 71 0 0 chr5 46568635 46568663 -156516869 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1899 148 101 3 chr5 46568663 46568993 -156516539 - L1PB4 LINE L1 -817 5339 4961 244 262 116 23 chr5 46570431 46570603 -156514929 - L1ME4a LINE L1 -47 6074 5887 25 0 0 0 chr5 46571033 46571058 -156514474 + AT_rich Low_complexity Low_complexity 1 25 0 3538 135 23 48 chr5 46571082 46571265 -156514267 - L1MA8 LINE L1 -2 6289 6103 1690 113 0 0 chr5 46571265 46571494 -156514038 + AluSg/x SINE Alu 77 305 -7 3538 135 23 48 chr5 46571494 46572041 -156513491 - L1MA8 LINE L1 -188 6103 5577 332 248 52 46 chr5 46572283 46572483 -156513049 + L1M4c LINE L1 2091 2304 -4078 1120 178 19 19 chr5 46572494 46572702 -156512830 + AluJb SINE Alu 85 292 -20 258 56 0 0 chr5 46572716 46572752 -156512780 + (CAA)n Simple_repeat Simple_repeat 3 38 0 2673 223 28 18 chr5 46572752 46573281 -156512251 + L1M4c LINE L1 2339 2861 -3521 426 20 0 0 chr5 46573281 46573332 -156512200 + (CA)n Simple_repeat Simple_repeat 2 52 0 2673 223 28 18 chr5 46573332 46573466 -156512066 + L1M4c LINE L1 2861 3016 -3366 2092 132 0 3 chr5 46573466 46573762 -156511770 - AluSx SINE Alu -17 295 1 2673 223 28 18 chr5 46573762 46573817 -156511715 + L1M4c LINE L1 3016 3069 -3313 913 206 6 0 chr5 46573817 46573987 -156511545 + FRAM SINE Alu 1 170 -6 1688 179 116 45 chr5 46573989 46574541 -156510991 + L1M4c LINE L1 3053 3643 -2739 305 320 56 0 chr5 46574555 46574680 -156510852 - L1 LINE L1 -3501 2645 2514 756 156 0 62 chr5 46574777 46574937 -156510595 + L1MA3 LINE L1 3649 3798 -2584 5166 175 23 81 chr5 46574950 46575104 -156510428 + L1 LINE L1 4328 4489 -1893 2204 123 0 0 chr5 46575104 46575404 -156510128 + AluSx SINE Alu 1 300 -12 5166 175 23 81 chr5 46575404 46576093 -156509439 + L1 LINE L1 4489 5216 -1166 2136 120 0 10 chr5 46576093 46576424 -156509108 + AluSg SINE Alu 1 310 0 2172 135 0 0 chr5 46576433 46576737 -156508795 + AluSg SINE Alu 1 304 -6 5166 175 23 81 chr5 46576737 46576753 -156508779 + L1 LINE L1 5224 5239 -1143 2107 113 14 3 chr5 46576753 46577045 -156508487 + AluSg SINE Alu 5 299 -11 5166 175 23 81 chr5 46577045 46577565 -156507967 + L1 LINE L1 5239 5639 -743 1873 174 69 48 chr5 46577570 46577795 -156507737 - MSTA LTR MaLR 0 428 188 2237 116 0 0 chr5 46577795 46578088 -156507444 + AluSx SINE Alu 3 295 -17 1873 174 69 48 chr5 46578088 46578281 -156507251 - MSTA LTR MaLR -240 188 1 8959 184 11 11 chr5 46578281 46579932 -156505600 - MSTA-int LTR MaLR 0 1651 1 1319 149 14 9 chr5 46579932 46580146 -156505386 - MSTB LTR MaLR 0 426 212 8837 188 44 28 chr5 46580150 46582825 -156502707 + L1MA3 LINE L1 3788 6513 -28 222 241 19 0 chr5 46583466 46583520 -156502012 - L2 LINE L2 -37 3235 3181 2242 117 0 0 chr5 46584524 46584824 -156500708 - AluSx SINE Alu -12 300 1 2011 120 0 10 chr5 46584887 46585179 -156500353 - AluSx SINE Alu -18 294 6 346 249 111 35 chr5 46586003 46586078 -156499454 - L1ME4a LINE L1 -5 6116 6048 2306 94 0 3 chr5 46586078 46586377 -156499155 - AluSc SINE Alu -11 298 1 346 249 111 35 chr5 46586377 46586751 -156498781 - L1ME4a LINE L1 -73 6048 5603 26 50 0 0 chr5 46586787 46586827 -156498705 + AT_rich Low_complexity Low_complexity 1 40 0 616 126 0 0 chr5 46588244 46588339 -156497193 - AluSg/x SINE Alu 0 310 216 195 42 0 0 chr5 46588602 46588626 -156496906 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 429 371 70 40 chr5 46589445 46589717 -156495815 + L2 LINE L2 2985 3264 -8 463 364 62 18 chr5 46589782 46590054 -156495478 - L2 LINE L2 -181 3091 2808 391 230 23 11 chr5 46591011 46591098 -156494434 - MER81 DNA DNA -22 92 5 21 0 0 0 chr5 46591410 46591431 -156494101 + AT_rich Low_complexity Low_complexity 1 21 0 299 233 80 49 chr5 46592024 46592187 -156493345 - L1M4 LINE L1 -3320 2826 2659 251 341 45 23 chr5 46592236 46592368 -156493164 - L1MEd LINE L1 -5799 320 186 476 265 123 51 chr5 46592462 46593014 -156492518 - L1ME2 LINE L1 -95 6069 5470 461 329 95 25 chr5 46593600 46593843 -156491689 - MIR SINE MIR 0 262 3 747 249 112 17 chr5 46595006 46595239 -156490293 - MIR SINE MIR 0 262 8 213 193 0 35 chr5 46595250 46595307 -156490225 + (TA)n Simple_repeat Simple_repeat 1 55 0 2132 108 3 16 chr5 46595381 46595686 -156489846 - AluSx SINE Alu -11 301 1 640 311 228 34 chr5 46595697 46597078 -156488454 - L2 LINE L2 -407 2907 1073 2330 93 3 0 chr5 46597078 46597380 -156488152 - AluSc SINE Alu -2 307 5 640 311 228 34 chr5 46597380 46597677 -156487855 - L2 LINE L2 -2241 1073 835 24 53 0 0 chr5 46597939 46597977 -156487555 + AT_rich Low_complexity Low_complexity 1 38 0 254 200 0 46 chr5 46597997 46598062 -156487470 + L1MC4 LINE L1 6652 6713 -1329 484 314 35 45 chr5 46598576 46598863 -156486669 + MER102a DNA MER1_type 38 321 -9 1846 159 3 20 chr5 46599894 46600189 -156485343 + AluJo SINE Alu 1 290 -22 282 56 0 0 chr5 46600189 46600225 -156485307 + (TA)n Simple_repeat Simple_repeat 2 37 0 1302 127 0 0 chr5 46601104 46601277 -156484255 + AluSx SINE Alu 20 192 -120 1899 139 42 0 chr5 46601407 46601695 -156483837 - AluSg SINE Alu -10 300 1 405 299 82 16 chr5 46602650 46602844 -156482688 - MIR SINE MIR -50 212 6 23 0 0 0 chr5 46603506 46603529 -156482003 + AT_rich Low_complexity Low_complexity 1 23 0 2806 113 27 7 chr5 46604362 46604806 -156480726 - L1PA13 LINE L1 -2 6161 5709 961 141 42 5 chr5 46605477 46605668 -156479864 - L1 LINE L1 -787 5359 5162 1643 151 4 4 chr5 46605668 46605943 -156479589 + L1PA16 LINE L1 5884 6162 -4 486 307 0 0 chr5 46606188 46606315 -156479217 - L2 LINE L2 -5 3308 3182 589 316 81 0 chr5 46606460 46606669 -156478863 - MIR SINE MIR -20 242 17 243 0 0 0 chr5 46606788 46606815 -156478717 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2255 19 0 0 chr5 46606815 46607075 -156478457 - L1PA5 LINE L1 -11 6143 5884 1031 25 0 0 chr5 46607075 46607194 -156478338 + L1PA5 LINE L1 5762 5880 -275 387 270 80 43 chr5 46607230 46607393 -156478139 - MER5A DNA MER1_type 0 189 21 2183 122 53 46 chr5 46607500 46607675 -156477857 + L1MA4 LINE L1 5887 6059 -241 2307 96 0 0 chr5 46607675 46607967 -156477565 + AluSc SINE Alu 6 297 -12 2183 122 53 46 chr5 46607967 46608202 -156477330 + L1MA4 LINE L1 6059 6300 0 295 186 94 86 chr5 46608709 46608860 -156476672 - L1MC4 LINE L1 -145 7897 7636 2130 118 23 3 chr5 46608911 46609215 -156476317 + AluSx SINE Alu 1 310 -2 2382 158 25 0 chr5 46609235 46609639 -156475893 - L1MC1 LINE L1 -4 6329 5916 629 244 65 6 chr5 46611398 46611566 -156473966 - MER63A DNA MER1_type -28 182 5 2084 107 4 4 chr5 46611755 46612062 -156473470 - AluSp SINE Alu 0 309 3 183 42 0 0 chr5 46612067 46612091 -156473441 + (T)n Simple_repeat Simple_repeat 1 24 0 202 200 25 0 chr5 46612968 46613008 -156472524 - L2 LINE L2 -2 3311 3271 322 318 110 12 chr5 46613073 46613246 -156472286 + L2 LINE L2 3124 3313 0 323 252 56 42 chr5 46614188 46614331 -156471201 + MIR SINE MIR 69 213 -49 490 328 134 0 chr5 46615452 46615653 -156469879 + MIR SINE MIR 35 262 0 1991 140 0 3 chr5 46615693 46615986 -156469546 - AluSx SINE Alu -12 300 9 235 354 31 31 chr5 46617490 46617651 -156467881 + MER5A DNA MER1_type 8 168 -21 * 304 301 56 42 chr5 46617512 46617655 -156467877 - MER5B DNA MER1_type -16 162 18 2198 118 0 28 chr5 46618331 46618652 -156466880 - AluSx SINE Alu 0 312 1 655 223 82 68 chr5 46619716 46619937 -156465595 - L1ME LINE L1 -498 5672 5456 198 0 0 0 chr5 46619937 46619959 -156465573 + (TA)n Simple_repeat Simple_repeat 2 23 0 1851 171 0 3 chr5 46619959 46620252 -156465280 - AluSx SINE Alu -20 292 1 655 223 82 68 chr5 46620252 46620413 -156465119 - L1ME LINE L1 -713 5457 5276 2913 93 2 41 chr5 46620432 46620677 -156464855 - L1PB1 LINE L1 -7 6144 5920 2211 114 0 23 chr5 46620677 46620985 -156464547 - AluSg SINE Alu -8 302 2 2913 93 2 41 chr5 46620985 46621156 -156464376 - L1PB1 LINE L1 -231 5920 5744 234 181 21 96 chr5 46621203 46621297 -156464235 + L1M4 LINE L1 3140 3226 -2920 2234 105 3 0 chr5 46621379 46621673 -156463859 - AluSc SINE Alu -14 295 1 419 164 60 0 chr5 46621711 46621812 -156463720 - AluSp/q SINE Alu 0 317 213 241 301 34 61 chr5 46622227 46622432 -156463100 - L1MEd LINE L1 -4881 1238 1044 2053 145 26 0 chr5 46622432 46622735 -156462797 - AluSx SINE Alu -1 311 1 241 301 34 61 chr5 46622735 46622855 -156462677 - L1MEd LINE L1 -5075 1044 922 290 45 23 0 chr5 46622867 46622911 -156462621 + (TA)n Simple_repeat Simple_repeat 1 45 0 2064 139 7 3 chr5 46622911 46623221 -156462311 - AluSq SINE Alu -2 311 1 811 133 78 33 chr5 46623272 46623452 -156462080 - L1MC2 LINE L1 0 6344 6157 22 0 0 0 chr5 46623452 46623474 -156462058 + AT_rich Low_complexity Low_complexity 1 22 0 390 198 26 4 chr5 46623495 46623586 -156461946 - L1MA6 LINE L1 -50 6253 6165 22 0 0 0 chr5 46623621 46623643 -156461889 + AT_rich Low_complexity Low_complexity 1 22 0 346 273 0 0 chr5 46624435 46624523 -156461009 - L1PB4 LINE L1 -8 6148 6061 863 191 5 113 chr5 46624819 46624902 -156460630 + FAM SINE Alu 1 4294967212 -269 7467 57 0 0 chr5 46624902 46626171 -156459361 - L1PA8 LINE L1 -2 6170 4879 863 191 5 113 chr5 46626171 46626291 -156459241 + FAM SINE Alu -85 46 -3 1000 125 80 0 chr5 46628352 46628528 -156457004 - L1MB3 LINE L1 0 6183 5994 2354 78 0 10 chr5 46628731 46629027 -156456505 - AluY SINE Alu -18 293 1 1152 183 31 58 chr5 46629161 46629385 -156456147 - MER20 DNA MER1_type -1 218 1 1138 173 81 8 chr5 46629400 46629648 -156455884 - L1MD3 LINE L1 0 7995 7730 2192 101 10 10 chr5 46629676 46629973 -156455559 - AluSx SINE Alu -15 297 1 1015 255 118 42 chr5 46631643 46632118 -156453414 - LTR33 LTR ERVL -7 514 4 2104 144 0 3 chr5 46632161 46632473 -156453059 + AluJb SINE Alu 1 311 -1 2016 143 0 0 chr5 46633183 46633469 -156452063 - AluSx SINE Alu -6 306 21 1308 238 120 27 chr5 46634441 46634916 -156450616 + MER113 DNA MER1_type? 2 520 -1 223 265 137 0 chr5 46634930 46635032 -156450500 + MIR3 SINE MIR 81 196 -12 352 323 15 15 chr5 46636103 46636233 -156449299 + MIR3 SINE MIR 66 195 -13 2187 106 3 7 chr5 46636453 46636754 -156448778 - AluSq SINE Alu -13 300 1 188 290 32 0 chr5 46637360 46637422 -156448110 + L3 LINE CR1 1300 1363 -214 249 254 34 0 chr5 46637524 46637583 -156447949 - LTR16C LTR ERVL -18 473 413 2336 179 26 0 chr5 46638956 46639342 -156446190 - MSTD LTR MaLR 0 396 1 246 224 30 0 chr5 46639441 46639508 -156446024 + (CA)n Simple_repeat Simple_repeat 2 70 0 207 226 38 0 chr5 46639669 46639722 -156445810 + GA-rich Low_complexity Low_complexity 5 59 0 1888 187 55 25 chr5 46641628 46641991 -156443541 - MLT1A2 LTR MaLR 0 374 1 688 199 142 0 chr5 46642369 46642510 -156443022 - ERVL-B1 LTR ERVL -5503 261 101 328 125 0 0 chr5 46642584 46642632 -156442900 - MLT2B1 LTR ERVL -8 512 465 39 0 0 0 chr5 46642654 46642693 -156442839 + AT_rich Low_complexity Low_complexity 1 39 0 363 281 133 33 chr5 46642694 46642904 -156442628 - L1MEc LINE L1 -5402 994 764 1070 295 75 33 chr5 46642996 46643505 -156442027 - L1MEc LINE L1 -5836 560 31 1772 171 7 7 chr5 46643603 46643908 -156441624 - AluJo SINE Alu -7 305 1 2232 118 3 9 chr5 46644069 46644384 -156441148 - AluSp SINE Alu 0 313 1 327 113 0 0 chr5 46645284 46645337 -156440195 + (CA)n Simple_repeat Simple_repeat 2 54 0 2307 107 7 116 chr5 46646147 46646568 -156438964 - THE1C LTR MaLR 0 375 1 11326 109 34 9 chr5 46646568 46648109 -156437423 - THE1C-int LTR MaLR 0 1580 1 2689 131 5 0 chr5 46648109 46648482 -156437050 - THE1C LTR MaLR 0 375 1 543 243 141 23 chr5 46648977 46649028 -156436504 - MIR SINE MIR -10 252 208 1691 181 60 26 chr5 46649028 46649376 -156436156 + MLT1A1 LTR MaLR 2 361 -4 543 243 141 23 chr5 46649376 46649501 -156436031 - MIR SINE MIR -54 208 55 288 250 0 0 chr5 46649784 46649856 -156435676 - MER3 DNA MER1_type 0 209 138 691 199 39 19 chr5 46649889 46650045 -156435487 - MER3 DNA MER1_type -49 160 2 704 197 20 14 chr5 46650264 46650411 -156435121 - MLT1F LTR MaLR 0 542 395 733 190 86 0 chr5 46650417 46650591 -156434941 + MER53 DNA DNA 1 189 0 * 1545 231 71 22 chr5 46650591 46650965 -156434567 - MLT1F LTR MaLR -142 400 7 443 264 16 16 chr5 46650995 46651116 -156434416 + L2 LINE L2 3192 3312 -1 2189 124 0 10 chr5 46651345 46651652 -156433880 + AluSx SINE Alu 1 304 -8 2149 121 3 19 chr5 46655740 46656054 -156429478 + AluSx SINE Alu 1 309 -3 320 281 31 16 chr5 46656588 46656716 -156428816 - MIR3 SINE MIR -26 182 53 2362 94 0 0 chr5 46657272 46657571 -156427961 - AluSq SINE Alu -14 299 1 477 317 36 55 chr5 46657885 46658194 -156427338 + L3b LINE CR1 1146 1448 -135 316 235 0 29 chr5 46658243 46658311 -156427221 - MER58 DNA MER1_type 0 2420 2355 455 311 31 12 chr5 46658337 46658498 -156427034 - LTR16C LTR ERVL -239 252 89 2193 109 6 10 chr5 46660059 46660371 -156425161 + AluSx SINE Alu 1 311 -1 6024 86 7 5 chr5 46660457 46661271 -156424261 + L1PB1 LINE L1 5304 6119 -32 2393 89 7 0 chr5 46661374 46661678 -156423854 + L1PB1 LINE L1 5846 6151 0 204 86 57 0 chr5 46661936 46661971 -156423561 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 804 206 85 155 chr5 46662411 46662765 -156422767 + HsTC2 DNA Tc2 1 329 -1569 483 244 25 46 chr5 46662747 46662944 -156422588 + HsTC2 DNA Tc2 1708 1900 0 * 198 382 52 64 chr5 46664957 46665300 -156420232 - L2 LINE L2 -8 3264 2926 1853 89 67 35 chr5 46665313 46665628 -156419904 + L1MC1 LINE L1 6004 6328 -5 283 191 147 0 chr5 46666111 46666179 -156419353 + L2 LINE L2 3221 3298 -15 2147 142 0 0 chr5 46666344 46666653 -156418879 - AluSx SINE Alu -3 309 1 219 295 16 0 chr5 46668439 46668500 -156417032 - MIR SINE MIR -6 256 195 381 357 20 20 chr5 46668536 46668725 -156416807 + L2 LINE L2 2546 2734 -580 337 320 21 0 chr5 46668725 46668822 -156416710 - MER91B DNA MER1_type 0 190 92 374 276 8 82 chr5 46668838 46668972 -156416560 - MER91B DNA MER1_type -63 127 4 587 248 270 13 chr5 46668974 46669013 -156416519 + L2 LINE L2 2724 2752 -561 1990 50 4 23 chr5 46669013 46669297 -156416235 + L1PA4 LINE L1 5889 6167 0 587 248 270 13 chr5 46669297 46669676 -156415856 + L2 LINE L2 2752 3313 0 657 299 28 31 chr5 46670286 46670540 -156414992 - MIR SINE MIR -8 254 2 231 291 119 37 chr5 46670749 46670883 -156414649 + MIR SINE MIR 2 146 -116 1809 110 100 7 chr5 46671183 46671464 -156414068 - AluSq SINE Alu -6 307 1 1801 111 100 7 chr5 46672002 46672282 -156413250 - AluSq SINE Alu -7 306 1 355 127 48 16 chr5 46672513 46672576 -156412956 + L2 LINE L2 3241 3305 -8 241 211 18 0 chr5 46673272 46673391 -156412141 + GA-rich Low_complexity Low_complexity 1 121 0 255 114 0 0 chr5 46674971 46675015 -156410517 + (GA)n Simple_repeat Simple_repeat 1 44 0 409 314 129 33 chr5 46675463 46675673 -156409859 - L1ME1 LINE L1 -7 6159 5930 780 180 60 9 chr5 46675745 46675962 -156409570 + Charlie5 DNA MER1_type 2357 2584 -28 352 318 53 69 chr5 46676053 46676242 -156409290 + L2 LINE L2 3082 3267 -5 238 267 69 15 chr5 46676286 46676417 -156409115 + L1ME LINE L1 5690 5827 -294 3232 203 49 38 chr5 46676419 46677223 -156408309 + L1M3 LINE L1 3985 4802 -1344 1789 173 7 0 chr5 46677223 46677523 -156408009 + AluJb SINE Alu 1 302 -10 3232 203 49 38 chr5 46677523 46677631 -156407901 + L1M3 LINE L1 4802 4907 -1239 39888 61 3 1 chr5 46677701 46683823 -156401709 + L1PA5 LINE L1 11 6148 -6 3786 182 20 61 chr5 46683823 46684421 -156401111 - L1MA9 LINE L1 -73 6239 5713 841 135 7 7 chr5 46684421 46684562 -156400970 - L1PB3 LINE L1 0 6154 6014 3786 182 20 61 chr5 46684562 46685134 -156400398 - L1MA9 LINE L1 -599 5713 5119 1788 197 26 36 chr5 46685153 46685420 -156400112 + L1M3 LINE L1 4892 5160 -1023 972 148 62 6 chr5 46685420 46685596 -156399936 + L1PA16 LINE L1 5979 6164 -2 1788 197 26 36 chr5 46685596 46685929 -156399603 + L1M3 LINE L1 5160 5486 -697 * 1948 201 76 4 chr5 46685926 46686438 -156399094 + L1 LINE L1 4288 4836 -1310 483 141 22 0 chr5 46686450 46686542 -156398990 + L1MB2 LINE L1 6074 6167 -4 281 208 218 41 chr5 46686572 46686710 -156398822 + L1ME4a LINE L1 5819 5931 -190 1722 128 51 90 chr5 46686710 46687100 -156398432 - THE1C LTR MaLR 0 375 1 281 208 218 41 chr5 46687100 46687158 -156398374 + L1ME4a LINE L1 5931 6050 -71 4062 155 39 4 chr5 46687211 46687939 -156397593 - L1PA15 LINE L1 0 6165 5413 21 0 0 0 chr5 46687951 46687972 -156397560 + AT_rich Low_complexity Low_complexity 1 21 0 363 286 137 9 chr5 46689008 46689235 -156396297 + MER112 DNA MER1_type 1 256 0 441 0 0 0 chr5 46689409 46689458 -156396074 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 46690264 46690286 -156395246 + AT_rich Low_complexity Low_complexity 1 22 0 3932 153 138 29 chr5 46690287 46691439 -156394093 + L1PA16 LINE L1 4200 5226 -940 188 0 74 0 chr5 46691439 46691466 -156394066 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3932 153 138 29 chr5 46691466 46691757 -156393775 + L1PA16 LINE L1 5226 5484 -682 216 0 0 0 chr5 46691757 46691781 -156393751 + (CA)n Simple_repeat Simple_repeat 2 25 0 3932 153 138 29 chr5 46691781 46691797 -156393735 + L1PA16 LINE L1 5484 5497 -669 1958 126 105 18 chr5 46691797 46692131 -156393401 + THE1B LTR MaLR 2 364 0 3932 153 138 29 chr5 46692131 46692425 -156393107 + L1PA16 LINE L1 5497 6162 -4 289 193 0 0 chr5 46692662 46692719 -156392813 - AluJo SINE Alu -1 301 245 576 253 0 32 chr5 46692719 46692873 -156392659 - AluJo SINE Alu -143 169 21 261 148 65 0 chr5 46692886 46692940 -156392592 - FLAM SINE Alu -8 125 78 321 289 128 45 chr5 46692989 46693145 -156392387 - MER5A DNA MER1_type 0 189 21 207 388 0 0 chr5 46693299 46693366 -156392166 - L2 LINE L2 -92 3180 3114 196 339 36 0 chr5 46693387 46693443 -156392089 + MER5A DNA MER1_type 43 100 -89 232 301 36 24 chr5 46693632 46693715 -156391817 - L2 LINE L2 -378 2935 2852 201 214 54 18 chr5 46693758 46693814 -156391718 - L2 LINE L2 -1 3312 3255 352 96 100 19 chr5 46694119 46694217 -156391315 - L1PA16 LINE L1 -233 5898 5793 397 143 0 0 chr5 46694227 46694290 -156391242 - THE1A LTR MaLR 0 355 293 1133 250 87 70 chr5 46695220 46695827 -156389705 - L2 LINE L2 0 3313 2687 2262 106 3 3 chr5 46696291 46696592 -156388940 - AluSg SINE Alu -9 301 1 2013 115 11 0 chr5 46696974 46697276 -156388256 + AluSx SINE Alu 1 305 0 282 283 80 29 chr5 46697832 46697970 -156387562 + L3b LINE CR1 1115 1259 -324 2076 147 0 3 chr5 46698227 46698534 -156386998 - AluSx SINE Alu -6 306 1 1157 223 90 10 chr5 46699277 46699577 -156385955 + MLT1H LTR MaLR 1 324 -225 2279 81 0 42 chr5 46699587 46699896 -156385636 + AluSc SINE Alu 1 296 -13 554 241 58 0 chr5 46699932 46700069 -156385463 + MLT1H LTR MaLR 405 549 0 536 310 30 30 chr5 46700504 46700701 -156384831 - MIR SINE MIR -16 246 50 680 281 86 31 chr5 46701056 46701348 -156384184 + MLT1J LTR MaLR 11 318 -193 25 65 0 0 chr5 46701550 46701596 -156383936 + AT_rich Low_complexity Low_complexity 1 46 0 296 264 22 44 chr5 46702506 46702597 -156382935 - MER5B DNA MER1_type 0 178 90 210 267 44 44 chr5 46702531 46702621 -156382911 + MER5A DNA MER1_type 37 126 -63 * 483 244 62 28 chr5 46705296 46705472 -156380060 - MER20B DNA MER1_type -595 188 7 473 313 21 7 chr5 46705952 46706096 -156379436 - MER5A DNA MER1_type 0 189 44 334 236 34 22 chr5 46706189 46706278 -156379254 - MER5A DNA MER1_type -55 134 45 25 0 0 0 chr5 46706358 46706383 -156379149 + AT_rich Low_complexity Low_complexity 1 25 0 1324 214 81 3 chr5 46707143 46707451 -156378081 + MLT1A1 LTR MaLR 6 337 -28 270 146 0 0 chr5 46707636 46707677 -156377855 + MLT1A1 LTR MaLR 325 365 0 40 0 0 0 chr5 46707945 46707985 -156377547 + AT_rich Low_complexity Low_complexity 1 40 0 1380 127 20 57 chr5 46708355 46708600 -156376932 - MER46A DNA MER2_type 0 236 1 568 251 21 10 chr5 46708786 46709044 -156376488 + MER46C DNA MER2_type 8 309 -29 2099 135 0 0 chr5 46709615 46709904 -156375628 - AluSx SINE Alu -18 294 6 283 261 63 9 chr5 46710850 46710961 -156374571 - MER104 DNA Tc2 -5 175 59 669 150 110 29 chr5 46711705 46711878 -156373654 + MLT1C LTR MaLR 65 251 -216 2185 108 0 7 chr5 46713193 46713488 -156372044 - AluSx SINE Alu -19 293 1 1341 132 5 10 chr5 46714081 46714269 -156371263 - AluSq SINE Alu -6 307 119 192 40 0 0 chr5 46714269 46714294 -156371238 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1341 132 5 10 chr5 46714294 46714309 -156371223 - AluSq SINE Alu -194 119 105 214 302 21 99 chr5 46714324 46714399 -156371133 + L2 LINE L2 1639 1718 -1596 2160 106 0 7 chr5 46714399 46714701 -156370831 + AluSx SINE Alu 6 305 -7 214 302 21 99 chr5 46714701 46714867 -156370665 + L2 LINE L2 1718 1861 -1453 271 209 75 0 chr5 46715126 46715193 -156370339 - MLT1H LTR MaLR 0 549 478 689 351 107 41 chr5 46715289 46716139 -156369393 + L2 LINE L2 1980 2885 -429 446 305 13 40 chr5 46716881 46717032 -156368500 + L2 LINE L2 3167 3313 0 738 237 96 19 chr5 46717486 46718157 -156367375 + L1ME3A LINE L1 5374 6170 0 21 0 0 0 chr5 46718220 46718241 -156367291 + AT_rich Low_complexity Low_complexity 1 21 0 211 368 28 19 chr5 46718485 46718591 -156366941 + L2 LINE L2 3123 3229 -43 216 143 0 0 chr5 46718621 46718663 -156366869 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 866 292 32 12 chr5 46718923 46719173 -156366359 + MIR SINE MIR 3 257 -5 280 280 21 0 chr5 46719185 46719278 -156366254 + L3b LINE CR1 1310 1404 -179 288 306 149 0 chr5 46719300 46719434 -156366098 - MIR3 SINE MIR -18 190 37 596 274 44 38 chr5 46719754 46719993 -156365539 + MIR SINE MIR 15 262 0 294 170 0 0 chr5 46720451 46720498 -156365034 - tRNA-Gly-GGA tRNA tRNA -28 47 1 408 175 10 58 chr5 46721214 46721317 -156364215 - L1PB4 LINE L1 0 6156 6059 309 313 88 48 chr5 46722410 46722557 -156362975 + MIR3 SINE MIR 34 186 -22 189 125 0 0 chr5 46722547 46722579 -156362953 + MIR SINE MIR 108 139 -123 * 2233 117 0 3 chr5 46722991 46723298 -156362234 - AluSp SINE Alu -7 306 1 427 329 100 4 chr5 46723994 46724225 -156361307 - MIR SINE MIR -8 254 2 495 302 59 12 chr5 46724420 46724589 -156360943 + MER5B DNA MER1_type 2 178 0 414 311 79 59 chr5 46724630 46724884 -156360648 + MIR SINE MIR 1 259 -3 183 261 0 0 chr5 46725486 46725532 -156360000 + L2 LINE L2 3137 3182 -90 515 294 51 23 chr5 46727539 46727716 -156357816 + MER5A DNA MER1_type 8 189 0 21 0 0 0 chr5 46728703 46728724 -156356808 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 46728818 46728840 -156356692 + AT_rich Low_complexity Low_complexity 1 22 0 43799 45 1 1 chr5 46728908 46735059 -156350473 - L1PA4 LINE L1 -3 6152 1 314 295 13 34 chr5 46735163 46735312 -156350220 + CT-rich Low_complexity Low_complexity 5 150 0 197 358 49 16 chr5 46735366 46735489 -156350043 - L2 LINE L2 -8 3264 3138 23 0 0 0 chr5 46735763 46735786 -156349746 + AT_rich Low_complexity Low_complexity 1 23 0 5780 159 15 7 chr5 46735791 46737573 -156347959 - L1PB3 LINE L1 -7 6147 4350 254 333 83 42 chr5 46737711 46737807 -156347725 + MIR3 SINE MIR 15 122 -86 2598 121 0 0 chr5 46737807 46738171 -156347361 + THE1B LTR MaLR 1 364 0 254 333 83 42 chr5 46738171 46738242 -156347290 + MIR3 SINE MIR 122 189 -19 1477 189 75 62 chr5 46738349 46738736 -156346796 + MSTD LTR MaLR 5 396 0 1541 142 6 119 chr5 46739125 46739462 -156346070 + AluJb SINE Alu 1 299 -3 217 208 0 21 chr5 46740596 46740644 -156344888 + MIR SINE MIR 95 141 -121 3841 248 68 29 chr5 46740910 46741310 -156344222 - L1MEc LINE L1 -4907 1489 1106 2023 143 0 0 chr5 46741310 46741611 -156343921 - AluSx SINE Alu -11 301 1 3841 248 68 29 chr5 46741611 46742611 -156342921 - L1MEc LINE L1 -5290 1106 35 454 296 61 58 chr5 46742777 46743138 -156342394 - MLT1J LTR MaLR -49 462 62 633 247 28 36 chr5 46744003 46744250 -156341282 - L1MC5 LINE L1 -13 7948 7704 252 217 77 84 chr5 46744277 46744382 -156341150 - L1MC5 LINE L1 -327 7634 7529 2567 56 0 3 chr5 46744382 46744684 -156340848 - AluY SINE Alu -10 301 1 252 217 77 84 chr5 46744684 46744721 -156340811 - L1MC5 LINE L1 -432 7529 7493 634 350 129 33 chr5 46745449 46746047 -156339485 - L3 LINE CR1 -89 1488 834 6871 47 1 2 chr5 46746057 46746901 -156338631 + L1PA7 LINE L1 5311 6153 -1 1762 252 53 31 chr5 46746912 46747424 -156338108 + L1M3e LINE L1 1 523 -6507 1832 231 138 2 chr5 46747458 46748067 -156337465 + L1M3e LINE L1 1830 2521 -4516 215 323 47 24 chr5 46748994 46749121 -156336411 - MIR SINE MIR -46 216 87 205 363 0 11 chr5 46750111 46750202 -156335330 + L2 LINE L2 3206 3295 -18 751 277 128 28 chr5 46750542 46750939 -156334593 + MLT1J LTR MaLR 6 442 -69 2632 179 37 7 chr5 46751367 46751825 -156333707 + MER70A LTR ERVL 1 472 0 388 315 18 59 chr5 46752305 46752527 -156333005 + Charlie8 DNA MER1_type 96 308 -2109 376 285 180 76 chr5 46753173 46753657 -156331875 - MLT1H LTR MaLR -14 535 2 556 296 58 27 chr5 46755868 46756196 -156329336 - L1ME LINE L1 -413 5749 5412 989 135 83 65 chr5 46756230 46756459 -156329073 - THE1C LTR MaLR 0 375 143 225 183 0 84 chr5 46756510 46756581 -156328951 - L1MEd LINE L1 -2161 3968 3904 302 289 83 25 chr5 46756624 46756866 -156328666 - L1MEd LINE L1 -2301 3828 3573 1575 116 107 77 chr5 46756876 46757203 -156328329 + MER1B DNA MER1_type 1 337 0 376 252 92 38 chr5 46757223 46757485 -156328047 - L1MEd LINE L1 -2613 3516 3241 423 293 37 37 chr5 46757696 46757990 -156327542 - L1MEd LINE L1 -3152 2977 2684 276 323 48 0 chr5 46758348 46758534 -156326998 - L1MEd LINE L1 -3600 2529 2335 578 179 77 0 chr5 46758610 46758727 -156326805 - L1PB4 LINE L1 -19 6137 6012 570 284 40 36 chr5 46758949 46759250 -156326282 - L1MEd LINE L1 -841 1649 1405 2045 114 4 0 chr5 46759290 46759570 -156325962 - AluSq SINE Alu -32 281 1 568 301 98 57 chr5 46759570 46760176 -156325356 - L1MEd LINE L1 -4872 1247 682 5651 153 17 2 chr5 46760812 46761765 -156323767 - L1MC2 LINE L1 -23 6321 5355 271 292 58 8 chr5 46761759 46761879 -156323653 + L1MC4a LINE L1 5609 5734 -387 * 333 0 0 0 chr5 46761912 46761949 -156323583 + (GA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 46762195 46762218 -156323314 + AT_rich Low_complexity Low_complexity 1 23 0 5214 102 12 9 chr5 46762220 46762998 -156322534 - L1PB2 LINE L1 -7 6144 5365 238 69 0 0 chr5 46762998 46763027 -156322505 - U2 snRNA snRNA -153 35 7 4912 195 11 57 chr5 46763035 46763639 -156321893 - L1PB2 LINE L1 -769 5377 4747 2278 85 0 14 chr5 46763639 46763933 -156321599 - AluY SINE Alu -19 292 3 4912 195 11 57 chr5 46763933 46764355 -156321177 - L1PB2 LINE L1 -1399 4747 4422 297 0 0 0 chr5 46764355 46764388 -156321144 + (CA)n Simple_repeat Simple_repeat 2 34 0 4912 195 11 57 chr5 46764388 46764675 -156320857 - L1PB2 LINE L1 -1724 4422 4123 804 246 48 68 chr5 46765004 46765402 -156320130 - MLT1B LTR MaLR 0 390 1 264 286 18 9 chr5 46765458 46765570 -156319962 + L1MC4a LINE L1 5820 5932 -1876 1991 105 4 8 chr5 46765852 46766119 -156319413 - AluSx SINE Alu -18 294 29 293 250 38 0 chr5 46766464 46766544 -156318988 + CT-rich Low_complexity Low_complexity 4 86 0 977 266 44 12 chr5 46766955 46767275 -156318257 + HERV16 LTR ERVL 963 1292 -3704 1142 283 95 41 chr5 46767343 46768499 -156317033 + HERV16 LTR ERVL 1689 2924 -2072 941 308 86 15 chr5 46769485 46769881 -156315651 + LTR16B LTR ERVL 35 458 -6 479 357 77 12 chr5 46769897 46770222 -156315310 - L1MEc LINE L1 -4131 2265 1920 285 300 37 45 chr5 46770339 46770582 -156314950 - L1MEc LINE L1 -4653 1743 1503 302 91 18 0 chr5 46770641 46770696 -156314836 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 259 287 120 5 chr5 46771274 46771483 -156314049 - L1MEc LINE L1 -4971 1234 1002 289 320 13 0 chr5 46772671 46772749 -156312783 - L3 LINE CR1 -621 956 878 2300 117 0 0 chr5 46773466 46773775 -156311757 + AluSx SINE Alu 3 311 -1 343 229 42 110 chr5 46774251 46774297 -156311235 + MIR SINE MIR 21 69 -139 2051 157 0 0 chr5 46774297 46774603 -156310929 - AluSx SINE Alu -6 306 1 343 229 42 110 chr5 46774603 46774674 -156310858 + MIR SINE MIR 69 130 -78 627 311 250 11 chr5 46774713 46775093 -156310439 + L2 LINE L2 2434 2904 -410 2101 122 3 35 chr5 46775153 46775472 -156310060 - AluSc SINE Alu 0 309 1 285 29 0 0 chr5 46775528 46775563 -156309969 - tRNA-Cys-TGC tRNA tRNA -38 37 3 269 240 260 20 chr5 46775674 46775774 -156309758 - L2 LINE L2 -37 3276 3153 278 298 24 0 chr5 46775872 46775956 -156309576 + L2 LINE L2 3187 3272 0 825 136 0 8 chr5 46776052 46776184 -156309348 + FLAM_C SINE Alu 2 132 -1 534 138 73 24 chr5 46776921 46777044 -156308488 - L1MB7 LINE L1 0 6184 6056 2150 121 0 31 chr5 46777354 46777676 -156307856 - AluSx SINE Alu 0 312 1 1053 264 122 81 chr5 46777822 46778505 -156307027 - MER50 LTR ERV1 -23 711 1 462 344 40 54 chr5 46778759 46779108 -156306424 + L2 LINE L2 2876 3219 -94 678 205 0 8 chr5 46779261 46779383 -156306149 - FLAM_A SINE Alu -12 121 1 182 360 82 20 chr5 46779645 46779792 -156305740 + L2 LINE L2 2338 2493 -821 556 300 17 6 chr5 46781351 46781531 -156304001 + MIR SINE MIR 81 262 0 397 303 9 9 chr5 46782374 46782483 -156303049 - MER5B DNA MER1_type -68 110 2 1682 222 4 27 chr5 46783177 46783640 -156301892 + MLT1D LTR MaLR 1 497 -8 423 203 34 0 chr5 46784722 46784840 -156300692 - L1MC4 LINE L1 -2 8040 7919 306 172 0 43 chr5 46784840 46784933 -156300599 + CT-rich Low_complexity Low_complexity 3 91 0 32 0 0 0 chr5 46784942 46784974 -156300558 + AT_rich Low_complexity Low_complexity 1 32 0 404 306 8 0 chr5 46785034 46785155 -156300377 - L1MC4 LINE L1 -124 7918 7797 2117 278 18 5 chr5 46785155 46785724 -156299808 - MLT1G LTR MaLR 0 590 15 353 329 42 18 chr5 46785799 46785966 -156299566 + MIR SINE MIR 32 202 -60 197 95 0 24 chr5 46786346 46786388 -156299144 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6315 78 8 2 chr5 46786390 46786735 -156298797 - L1PB1 LINE L1 -13 6138 5797 225 0 0 0 chr5 46786735 46786760 -156298772 + (TA)n Simple_repeat Simple_repeat 2 26 0 6315 78 8 2 chr5 46786760 46787646 -156297886 - L1PB1 LINE L1 -354 5797 4896 840 286 60 20 chr5 46787676 46788025 -156297507 - MLT1L LTR MaLR -18 597 235 2475 57 3 0 chr5 46788306 46788605 -156296927 - AluY SINE Alu -11 300 1 765 279 69 28 chr5 46789146 46789537 -156295995 - MLT1I LTR MaLR -2 407 1 195 42 0 0 chr5 46790238 46790262 -156295270 + (TAA)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 46790328 46790351 -156295181 + AT_rich Low_complexity Low_complexity 1 23 0 365 259 103 17 chr5 46790351 46790467 -156295065 - MIR SINE MIR -66 196 71 239 152 22 0 chr5 46790684 46790730 -156294802 + L2 LINE L2 3226 3272 0 7611 25 16 2 chr5 46791094 46792269 -156293263 - L1PA3 LINE L1 0 6155 4972 4777 63 23 1 chr5 46795442 46796140 -156289392 - L1P LINE L1 -1017 5129 4417 4527 31 2 0 chr5 46796140 46796712 -156288820 + L1P LINE L1 3842 4414 -1732 386 254 112 6 chr5 46796724 46796893 -156288639 - L1ME4a LINE L1 -266 5855 5669 1220 98 0 0 chr5 46798002 46798175 -156287357 - MER51B LTR ERV1 -157 220 48 472 134 0 82 chr5 46798164 46798261 -156287271 - MER51A LTR ERV1 -545 89 1 * 1031 223 72 36 chr5 46798263 46798576 -156286956 + MLT1C LTR MaLR 132 379 -11 4157 134 20 33 chr5 46799047 46799783 -156285749 - LTR8A LTR ERV1 0 727 1 718 246 28 17 chr5 46800571 46800750 -156284782 + MER5A DNA MER1_type 9 189 0 623 251 0 59 chr5 46801098 46801317 -156284215 + L2 LINE L2 3103 3308 -5 206 32 32 0 chr5 46802080 46802111 -156283421 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr5 46802364 46802387 -156283145 + AT_rich Low_complexity Low_complexity 1 23 0 634 290 54 9 chr5 46802419 46802640 -156282892 - MIR SINE MIR -12 250 20 1868 177 3 0 chr5 46803183 46803482 -156282050 - AluJo SINE Alu -12 300 1 3783 122 9 40 chr5 46803494 46804125 -156281407 - L1PA15 LINE L1 0 6165 5554 546 281 72 48 chr5 46806834 46807293 -156278239 + L1ME4a LINE L1 5457 5926 -195 305 204 131 36 chr5 46807927 46808064 -156277468 + L1ME4a LINE L1 5956 6105 -16 1453 310 87 62 chr5 46809202 46809522 -156276010 - L2 LINE L2 -1 3271 2960 2140 122 3 3 chr5 46809522 46809817 -156275715 + AluSg SINE Alu 1 295 -15 1453 310 87 62 chr5 46809817 46810830 -156274702 - L2 LINE L2 -312 2960 1888 226 250 0 18 chr5 46810927 46810966 -156274566 + GA-rich Low_complexity Low_complexity 1 40 -15 204 40 0 0 chr5 46810966 46810991 -156274541 + (GGAGA)n Simple_repeat Simple_repeat 4 28 0 226 250 0 18 chr5 46810991 46811007 -156274525 + GA-rich Low_complexity Low_complexity 40 55 0 207 239 98 22 chr5 46811110 46811202 -156274330 - L2 LINE L2 -204 3068 2970 1415 166 6 131 chr5 46814326 46814670 -156270862 + AluJb SINE Alu 2 302 0 736 235 83 51 chr5 46816326 46816543 -156268989 - MER58A DNA MER1_type 0 224 1 761 271 59 0 chr5 46816556 46816726 -156268806 + MER5A DNA MER1_type 6 185 -4 331 309 10 0 chr5 46817716 46817813 -156267719 + (TA)n Simple_repeat Simple_repeat 2 99 0 188 317 0 0 chr5 46818289 46818349 -156267183 + MIR SINE MIR 166 225 -37 493 286 18 13 chr5 46818809 46818954 -156266578 - MIR SINE MIR -62 146 26 220 226 157 59 chr5 46820980 46821082 -156264450 - MIR SINE MIR -2 260 149 197 184 0 26 chr5 46821532 46821570 -156263962 - MIR SINE MIR -77 185 149 463 265 30 24 chr5 46822478 46822644 -156262888 + Charlie7 DNA MER1_type 370 536 -2076 2167 123 0 3 chr5 46822711 46823011 -156262521 - AluSg SINE Alu -11 299 1 222 222 0 0 chr5 46823489 46823543 -156261989 + GA-rich Low_complexity Low_complexity 3 56 0 1791 271 126 18 chr5 46824229 46825000 -156260532 - L1ME3A LINE L1 -4 6166 5313 445 376 96 0 chr5 46825061 46825279 -156260253 - MIR SINE MIR 0 262 24 858 182 10 0 chr5 46825758 46825911 -156259621 + MIR SINE MIR 104 257 -5 298 297 245 19 chr5 46825934 46826089 -156259443 - L2 LINE L2 0 3313 3124 264 290 0 10 chr5 46826317 46826417 -156259115 - HAL1b LINE L1 -600 748 650 22 56 0 0 chr5 46826433 46826469 -156259063 + AT_rich Low_complexity Low_complexity 1 36 0 7846 138 22 2 chr5 46826972 46828244 -156257288 + HSMAR2 DNA Mariner 5 1301 -1 276 130 0 0 chr5 46828703 46828749 -156256783 + (CA)n Simple_repeat Simple_repeat 2 47 0 2043 142 132 5 chr5 46828900 46829280 -156256252 - MSTA LTR MaLR 0 428 1 225 235 25 92 chr5 46829343 46829462 -156256070 - HAL1b LINE L1 -696 652 542 375 300 40 40 chr5 46829480 46829630 -156255902 - HAL1b LINE L1 -1104 244 95 32 26 0 0 chr5 46829683 46829722 -156255810 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 46829734 46829757 -156255775 + AT_rich Low_complexity Low_complexity 1 23 0 219 217 87 0 chr5 46830101 46830170 -156255362 + L2 LINE L2 3133 3207 -106 322 338 83 51 chr5 46830432 46830746 -156254786 - L2 LINE L2 -633 2681 2358 292 229 104 10 chr5 46830878 46830974 -156254558 - L2 LINE L2 -966 2348 2244 245 354 129 36 chr5 46832235 46832761 -156252771 + L2 LINE L2 121 695 -2619 915 119 4 183 chr5 46834439 46834674 -156250858 - 7SK RNA RNA 0 193 1 197 128 0 26 chr5 46834755 46834794 -156250738 + (TATG)n Simple_repeat Simple_repeat 1 38 0 239 336 42 17 chr5 46836552 46836671 -156248861 + MIR3 SINE MIR 81 202 -6 353 235 0 0 chr5 46837192 46837260 -156248272 - L2 LINE L2 -56 3257 3190 2514 62 0 24 chr5 46887752 46888090 -156197442 + L1PA5 LINE L1 5821 6150 -4 2134 132 0 0 chr5 46888847 46889151 -156196381 - AluSg1 SINE Alu -4 305 2 806 220 50 0 chr5 46890070 46890229 -156195303 - MER45A DNA AcHobo -11 167 1 306 306 31 0 chr5 46891927 46892025 -156193507 - MIR3 SINE MIR -5 203 103 531 289 53 0 chr5 46892374 46892531 -156193001 + MIR SINE MIR 96 259 -3 2273 84 0 0 chr5 46892842 46893127 -156192405 - AluY SINE Alu -1 310 26 40215 71 6 9 chr5 46893443 46899185 -156186347 + L1P2 LINE L1 12 5756 -398 238 251 192 2 chr5 46900646 46900733 -156184799 - MIR SINE MIR -103 105 2 759 233 41 6 chr5 46901328 46901500 -156184032 + MER58A DNA MER1_type 35 212 -12 220 328 64 80 chr5 46902790 46903268 -156182264 + L2 LINE L2 2461 2926 -346 284 260 110 0 chr5 46904256 46904329 -156181203 - L2 LINE L2 -1 3271 3191 355 254 45 60 chr5 46904560 46904694 -156180838 - L2 LINE L2 -40 3273 3142 25 0 0 0 chr5 46906744 46906769 -156178763 + AT_rich Low_complexity Low_complexity 1 25 0 685 196 7 0 chr5 46906770 46906908 -156178624 - L1M4 LINE L1 -696 5488 5350 1104 158 99 10 chr5 46906930 46907132 -156178400 - L1PA16 LINE L1 -9 6157 5938 300 312 11 91 chr5 46907210 46907396 -156178136 - HAL1 LINE L1 -2 2505 2335 3108 184 115 58 chr5 46907501 46908098 -156177434 + MER106B DNA MER1_type 2 680 -379 2276 106 0 3 chr5 46908098 46908401 -156177131 + AluSx SINE Alu 7 308 -4 3108 184 115 58 chr5 46908401 46908793 -156176739 + MER106B DNA MER1_type 680 1048 -11 550 247 75 39 chr5 46909924 46910203 -156175329 - L1MC4 LINE L1 -243 7799 7511 869 105 44 77 chr5 46910245 46910426 -156175106 - L1MA8 LINE L1 -2 6289 6115 4280 162 30 17 chr5 46910440 46911279 -156174253 - L1MB8 LINE L1 -6 6408 5559 5456 34 1 1 chr5 46911279 46911930 -156173602 - L1PA4 LINE L1 -4 6151 5501 5174 39 2 0 chr5 46911930 46912705 -156172827 + L1P2 LINE L1 4761 5538 -617 3249 153 3 12 chr5 46912688 46913252 -156172280 - L1MA8 LINE L1 -166 6125 5567 * 7343 165 19 83 chr5 46913353 46915182 -156170350 - L1MB8 LINE L1 -816 5566 3855 866 117 15 29 chr5 46915182 46915319 -156170213 + AluSg/x SINE Alu 162 296 -14 2650 227 68 67 chr5 46915320 46916054 -156169478 - L1MB8 LINE L1 -2943 3439 2707 4082 165 82 59 chr5 46916054 46917097 -156168435 + MER11C LTR ERVK 1 1067 -4 3676 105 62 7 chr5 46916538 46917102 -156168430 + MER11A LTR ERVK 672 1266 0 2650 227 68 67 chr5 46917102 46917686 -156167846 - L1MB8 LINE L1 -3680 2702 2103 198 389 111 0 chr5 46919047 46919173 -156166359 + L2 LINE L2 3125 3264 -8 325 262 50 57 chr5 46919324 46919465 -156166067 + MIR SINE MIR 53 192 -70 261 75 0 0 chr5 46920529 46920569 -156164963 + (T)n Simple_repeat Simple_repeat 1 40 0 7828 16 0 0 chr5 46921269 46922602 -156162930 - L1PA2 LINE L1 -3 6152 4820 16811 29 0 0 chr5 46922602 46924622 -156160910 + L1PA2 LINE L1 2824 4843 -1303 667 205 149 96 chr5 46924831 46925153 -156160379 + MER63 DNA MER1_type 685 1023 -38 1690 118 40 139 chr5 46925161 46925290 -156160242 - L1MA4A LINE L1 -6 6297 6157 2103 125 3 3 chr5 46925290 46925602 -156159930 - AluSx SINE Alu 0 312 1 1690 118 40 139 chr5 46925602 46925896 -156159636 - L1MA4A LINE L1 -146 6157 5916 * 2882 129 75 2 chr5 46925886 46926376 -156159156 - L1M2 LINE L1 -4174 3035 2510 2281 252 94 82 chr5 46926371 46927478 -156158054 - L1M2 LINE L1 -5392 1817 686 * 240 276 0 17 chr5 46927508 46927566 -156157966 + MER63 DNA MER1_type 1005 1061 0 1989 135 16 32 chr5 46928320 46928697 -156156835 + THE1C LTR MaLR 1 371 -4 2236 172 35 53 chr5 46928942 46929493 -156156039 + L1MA7 LINE L1 5747 6287 -4 877 313 72 13 chr5 46929819 46930279 -156155253 + LTR16C LTR ERVL 1 487 -4 429 329 75 17 chr5 46930465 46930705 -156154827 - MIR SINE MIR -3 259 6 1347 239 19 63 chr5 46930992 46931436 -156154096 - L1M4 LINE L1 -2157 3989 3572 1807 127 35 0 chr5 46931436 46931695 -156153837 + AluSq SINE Alu 1 268 -45 1347 239 19 63 chr5 46931695 46931790 -156153742 - L1M4 LINE L1 -2574 3572 3474 816 257 30 48 chr5 46931783 46932163 -156153369 - L1 LINE L1 -2168 3978 3613 * 236 339 31 16 chr5 46932528 46932655 -156152877 - L1ME LINE L1 -5922 148 20 241 287 100 27 chr5 46932798 46932948 -156152584 + MLT1J LTR MaLR 348 508 -3 1264 191 25 110 chr5 46933357 46933676 -156151856 + L1 LINE L1 4125 4397 -1749 1942 81 0 4 chr5 46933676 46933923 -156151609 + AluY SINE Alu 54 299 -12 1264 191 25 110 chr5 46933923 46934047 -156151485 + L1 LINE L1 4397 4530 -1616 5198 132 49 0 chr5 46934049 46935485 -156150047 + L1PA16 LINE L1 4657 6157 -9 253 313 28 50 chr5 46936403 46936582 -156148950 + MIR3 SINE MIR 33 207 -1 315 254 28 111 chr5 46936702 46937027 -156148505 + MLT1I LTR MaLR 116 549 0 206 291 47 12 chr5 46937181 46937267 -156148265 - MIR SINE MIR -109 153 65 227 283 75 25 chr5 46937413 46937533 -156147999 - LTR67 LTR ERVL -46 511 386 4832 118 108 22 chr5 46938447 46939255 -156146277 + MER4D LTR ERV1 1 877 -26 1479 295 41 23 chr5 46939385 46939900 -156145632 - L1MEc LINE L1 -5834 562 39 307 287 45 84 chr5 46940044 46940246 -156145286 + Tigger8 DNA MER2_type 462 655 -11 2341 92 0 16 chr5 46940307 46940613 -156144919 + AluY SINE Alu 1 301 -10 2137 112 10 0 chr5 46941268 46941562 -156143970 + AluSx SINE Alu 1 297 -15 2163 8 0 4 chr5 46942240 46942489 -156143043 - L1PA2 LINE L1 -263 5892 5645 1199 28 0 0 chr5 46942489 46942632 -156142900 + L1PA2 LINE L1 6013 6155 0 3175 143 30 6 chr5 46943213 46943753 -156141779 - L1PA15 LINE L1 0 6165 5613 706 306 86 17 chr5 46943821 46944112 -156141420 + L2 LINE L2 1400 1710 -1604 22 35 0 0 chr5 46944131 46944160 -156141372 + AT_rich Low_complexity Low_complexity 1 29 0 1907 121 63 30 chr5 46944844 46945207 -156140325 - THE1C LTR MaLR 0 375 1 224 30 30 0 chr5 46946441 46946474 -156139058 + (CA)n Simple_repeat Simple_repeat 2 35 0 2237 100 0 16 chr5 46946684 46946993 -156138539 + AluSp SINE Alu 6 309 -4 354 165 11 22 chr5 46948231 46948322 -156137210 + CT-rich Low_complexity Low_complexity 2 91 0 183 299 194 0 chr5 46951117 46951184 -156134348 + MER5B DNA MER1_type 56 135 -43 315 340 58 58 chr5 46952110 46952301 -156133231 + MIR3 SINE MIR 18 208 0 278 365 19 0 chr5 46952788 46952895 -156132637 + MIR3 SINE MIR 93 201 -7 184 305 122 15 chr5 46953098 46953229 -156132303 + L2 LINE L2 3165 3309 -4 1380 263 111 23 chr5 46953598 46954085 -156131447 + MLT1H1 LTR MaLR 26 555 0 263 385 101 44 chr5 46954575 46954983 -156130549 - L2 LINE L2 -4 3268 2838 463 160 9 57 chr5 46955919 46956025 -156129507 + FLAM_A SINE Alu 36 136 -6 525 296 13 7 chr5 46957702 46957854 -156127678 - MIR SINE MIR -10 252 100 273 356 23 23 chr5 46958973 46959105 -156126427 + MER5A DNA MER1_type 2 133 -56 1999 121 0 53 chr5 46959110 46959433 -156126099 - AluY SINE Alu -5 306 1 277 268 18 18 chr5 46959736 46959848 -156125684 - L1P LINE L1 -1131 5015 4904 232 287 89 10 chr5 46960140 46960241 -156125291 + L2 LINE L2 1913 2021 -1293 312 135 19 0 chr5 46960276 46960328 -156125204 - MLT1J2 LTR MaLR -48 402 350 619 276 92 0 chr5 46960397 46960582 -156124950 - MLT1J1 LTR MaLR -242 204 3 924 348 111 42 chr5 46960589 46961696 -156123836 + L2 LINE L2 2035 3210 -62 875 302 19 34 chr5 46962430 46962751 -156122781 + LTR16A LTR ERVL 109 424 -26 185 289 92 0 chr5 46964927 46965003 -156120529 + MIR SINE MIR 2 84 -178 1027 244 61 75 chr5 46965658 46966084 -156119448 - MLT1J LTR MaLR -23 488 69 2248 102 26 0 chr5 46966722 46967027 -156118505 - AluSp SINE Alu 0 313 1 1893 88 42 33 chr5 46967363 46967669 -156117863 + THE1C LTR MaLR 3 311 -64 324 0 0 0 chr5 46970045 46970081 -156115451 + (TG)n Simple_repeat Simple_repeat 2 37 0 294 378 63 0 chr5 46970761 46970888 -156114644 + L2 LINE L2 3136 3270 -2 2136 128 0 0 chr5 46973408 46973704 -156111828 - AluSx SINE Alu -16 296 1 252 323 83 23 chr5 46974442 46974575 -156110957 + L2 LINE L2 3173 3313 0 724 321 123 65 chr5 46975107 46976046 -156109486 + L2 LINE L2 2288 3272 0 5007 192 238 37 chr5 46976149 46977534 -156107998 - MER52A LTR ERV1 0 1755 1 2684 153 23 40 chr5 46978898 46979454 -156106078 + L1MA7 LINE L1 5743 6289 -2 381 22 0 0 chr5 46980481 46980527 -156105005 + (A)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 46980788 46980810 -156104722 + AT_rich Low_complexity Low_complexity 1 22 0 260 318 82 0 chr5 46981642 46981752 -156103780 - L1MEd LINE L1 -5941 178 60 1770 112 89 104 chr5 46981752 46982146 -156103386 + MLT1B LTR MaLR 1 388 -2 231 269 0 0 chr5 46982853 46982905 -156102627 + GA-rich Low_complexity Low_complexity 3 54 0 225 275 14 0 chr5 46983160 46983229 -156102303 + GA-rich Low_complexity Low_complexity 1 70 0 22 0 0 0 chr5 46984228 46984250 -156101282 + AT_rich Low_complexity Low_complexity 1 22 0 253 158 35 0 chr5 46984646 46984688 -156100844 - HSMAR1 DNA Mariner 0 1287 1241 189 0 0 0 chr5 46984688 46984709 -156100823 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 253 158 35 0 chr5 46984709 46984723 -156100809 - HSMAR1 DNA Mariner -46 1241 1229 1736 83 91 51 chr5 46984723 46984999 -156100533 - AluY SINE Alu -24 287 1 388 138 0 31 chr5 46985228 46985293 -156100239 - LTR3b LTR ERVK 0 500 438 1835 175 47 44 chr5 46985293 46985721 -156099811 - LTR3 LTR ERVK 0 429 1 285 163 0 0 chr5 46985736 46985785 -156099747 - HERVK14 LTR ERVK -61 5884 5836 * 2140 193 17 10 chr5 46985776 46986186 -156099346 - HERVK3 LTR ERVK -4967 2276 1864 303 111 0 111 chr5 46986186 46986249 -156099283 - HERVK3 LTR ERVK -5867 1376 1321 * 402 260 0 29 chr5 46986237 46986341 -156099191 - HERVK3 LTR ERVK -6563 680 580 769 199 92 15 chr5 46986407 46986603 -156098929 - HERVK3 LTR ERVK -6978 265 55 431 151 123 0 chr5 46986912 46986985 -156098547 - LTR3b LTR ERVK 0 500 419 2059 122 14 3 chr5 46986994 46987290 -156098242 - LTR3b LTR ERVK -17 483 185 400 169 0 0 chr5 46987338 46987403 -156098129 - Tigger5 DNA MER2_type -2244 79 15 372 202 30 71 chr5 46987435 46987469 -156098063 - MIR SINE MIR -65 197 163 2817 209 16 5 chr5 46987469 46988025 -156097507 + MER68 LTR ERV1 1 562 0 372 202 30 71 chr5 46988025 46988089 -156097443 - MIR SINE MIR -99 163 103 289 263 0 25 chr5 46988373 46988453 -156097079 + MIR SINE MIR 74 151 -111 243 382 18 0 chr5 46988619 46988729 -156096803 + MIR SINE MIR 28 139 -123 21 0 0 0 chr5 46988917 46988938 -156096594 + AT_rich Low_complexity Low_complexity 1 21 0 1880 154 133 16 chr5 46989944 46990327 -156095205 - MSTA LTR MaLR 0 428 1 2328 172 7 7 chr5 46990327 46990770 -156094762 + L1MB3 LINE L1 5741 6183 0 345 47 0 0 chr5 46990954 46990997 -156094535 + (GA)n Simple_repeat Simple_repeat 1 43 0 2038 99 40 0 chr5 46991886 46992185 -156093347 + AluSx SINE Alu 1 310 0 261 139 0 0 chr5 46992350 46992393 -156093139 + (A)n Simple_repeat Simple_repeat 1 43 0 292 219 110 0 chr5 46992458 46992540 -156092992 + MIR SINE MIR 115 205 -57 184 307 158 39 chr5 46993413 46993540 -156091992 + L2 LINE L2 3172 3313 0 1549 154 48 6 chr5 46994015 46994327 -156091205 - L1MB2 LINE L1 0 6171 5847 308 344 23 23 chr5 46994573 46994704 -156090828 + MIR3 SINE MIR 11 141 -67 32 26 0 0 chr5 46994775 46994814 -156090718 + AT_rich Low_complexity Low_complexity 1 39 0 1010 125 6 6 chr5 46994820 46994988 -156090544 + L1MB3 LINE L1 6015 6182 -1 220 282 94 34 chr5 46995198 46995315 -156090217 - MIR SINE MIR -46 216 93 246 62 0 0 chr5 46995488 46995520 -156090012 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 32 0 0 chr5 46996164 46996195 -156089337 + AT_rich Low_complexity Low_complexity 1 31 0 535 290 34 23 chr5 46996306 46996482 -156089050 - MIR SINE MIR -4 258 81 215 346 138 31 chr5 46996477 46996607 -156088925 - L3 LINE CR1 -8 1569 1426 * 581 366 28 16 chr5 46996809 46997131 -156088401 - L3 LINE CR1 -412 1165 840 386 305 105 21 chr5 46997978 46998168 -156087364 - MIR SINE MIR -11 251 46 549 298 174 26 chr5 46998689 46999115 -156086417 - L2 LINE L2 -11 3302 2814 27 0 0 0 chr5 46999142 46999169 -156086363 + AT_rich Low_complexity Low_complexity 1 27 0 44184 36 1 4 chr5 46999169 47005338 -156080194 - L1PA3 LINE L1 -3 6152 2 904 164 20 0 chr5 47005341 47005493 -156080039 - FRAM SINE Alu -5 171 17 1346 337 45 30 chr5 47005493 47006199 -156079333 - L2 LINE L2 -570 2744 2028 2641 265 95 67 chr5 47006202 47008494 -156077038 + L1MB1 LINE L1 1 1979 -3993 11745 202 41 19 chr5 47008526 47011228 -156074304 + L1MB1 LINE L1 2045 4857 -1135 2931 173 38 12 chr5 47011228 47011811 -156073721 + L1PB4 LINE L1 5547 6144 -12 11745 202 41 19 chr5 47011811 47012973 -156072559 + L1MB1 LINE L1 4857 5992 0 1285 301 94 16 chr5 47012979 47013607 -156071925 - L2 LINE L2 -1284 2030 1354 197 108 27 0 chr5 47013627 47013664 -156071868 + (TG)n Simple_repeat Simple_repeat 1 38 0 976 344 33 9 chr5 47013744 47014165 -156071367 - L2 LINE L2 -1913 1401 971 318 87 0 0 chr5 47015221 47015267 -156070265 + (TG)n Simple_repeat Simple_repeat 1 46 0 249 83 0 0 chr5 47016464 47016500 -156069032 + (TG)n Simple_repeat Simple_repeat 1 36 0 412 269 119 25 chr5 47017265 47017425 -156068107 - MER5A DNA MER1_type -6 183 9 349 278 8 53 chr5 47019717 47019850 -156065682 + MIR SINE MIR 95 221 -41 205 175 0 0 chr5 47020410 47020450 -156065082 + T-rich Low_complexity Low_complexity 2 41 0 274 272 81 36 chr5 47023532 47023691 -156061841 + MIR SINE MIR 35 203 -59 286 338 26 52 chr5 47024141 47024220 -156061312 + MIR3 SINE MIR 54 129 -79 2706 171 2 11 chr5 47024220 47024688 -156060844 - MLT2C2 LTR ERVL 0 464 1 286 338 26 52 chr5 47024688 47024762 -156060770 + MIR3 SINE MIR 129 203 -5 2110 70 0 4 chr5 47024843 47025102 -156060430 - AluY SINE Alu -53 258 1 24 32 0 0 chr5 47025702 47025733 -156059799 + AT_rich Low_complexity Low_complexity 1 31 0 208 279 82 74 chr5 47026333 47026455 -156059077 + L2 LINE L2 3166 3288 -25 220 221 211 29 chr5 47026472 47026576 -156058956 - L2 LINE L2 0 3313 3191 2838 158 14 0 chr5 47027027 47027519 -156058013 + L1MB3 LINE L1 5685 6183 0 2162 229 43 25 chr5 47027611 47028166 -156057366 - MER90 LTR ERV1 -10 565 1 22 80 0 0 chr5 47029220 47029270 -156056262 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 47029283 47029304 -156056228 + AT_rich Low_complexity Low_complexity 1 21 0 508 236 88 28 chr5 47029535 47029717 -156055815 - L1MC5 LINE L1 -48 7913 7721 901 87 0 0 chr5 47029944 47030059 -156055473 - AluSq/x SINE Alu -198 115 1 1948 141 14 0 chr5 47031340 47031630 -156053902 + AluSx SINE Alu 3 296 -16 35 54 0 0 chr5 47032793 47032849 -156052683 + AT_rich Low_complexity Low_complexity 1 56 0 315 0 0 0 chr5 47034687 47034722 -156050810 + (TG)n Simple_repeat Simple_repeat 1 35 0 360 239 188 24 chr5 47035166 47035379 -156050153 - LTR50 LTR ERVL -20 775 528 816 240 149 8 chr5 47035500 47035742 -156049790 - LTR50 LTR ERVL -517 278 3 2019 187 38 115 chr5 47035744 47036274 -156049258 + MLT1D LTR MaLR 1 489 -16 728 196 13 0 chr5 47036371 47036529 -156049003 + L1ME2 LINE L1 5336 5495 -669 1976 105 7 4 chr5 47036529 47036805 -156048727 - AluSq SINE Alu -8 305 29 3521 143 36 25 chr5 47036905 47037546 -156047986 - MER4E LTR ERV1 -118 648 1 518 250 29 15 chr5 47037546 47037682 -156047850 + MLT1C LTR MaLR 287 424 -43 338 222 0 50 chr5 47037684 47037783 -156047749 + L1ME2 LINE L1 5837 5930 -234 525 317 108 8 chr5 47037784 47038029 -156047503 + MLT1H LTR MaLR 11 282 -267 4116 125 6 11 chr5 47038029 47038453 -156047079 + MER41B LTR ERV1 1 423 -212 2184 135 30 25 chr5 47038453 47038815 -156046717 + THE1B LTR MaLR 1 364 0 4116 125 6 11 chr5 47038815 47039020 -156046512 + MER41B LTR ERV1 423 627 -8 549 288 62 10 chr5 47039028 47039253 -156046279 + MLT1H LTR MaLR 278 546 -3 1863 165 36 43 chr5 47039292 47039685 -156045847 + L1MA8 LINE L1 4658 5047 -1099 2195 122 99 18 chr5 47039686 47040079 -156045453 + MER4B LTR ERV1 1 425 -185 273 111 22 0 chr5 47040079 47040124 -156045408 + MADE1 DNA Mariner 1 46 -34 263 95 0 0 chr5 47040211 47040253 -156045279 + MADE1 DNA Mariner 35 76 -4 1272 113 11 0 chr5 47040257 47040442 -156045090 + MER4B LTR ERV1 424 610 0 4754 147 13 12 chr5 47040442 47041457 -156044075 + L1MA8 LINE L1 5045 6062 -229 543 232 48 77 chr5 47041458 47041665 -156043867 + L1ME2 LINE L1 5961 6161 -3 702 192 187 5 chr5 47041701 47041899 -156043633 + MER31B LTR ERV1 225 458 -8 21 0 0 0 chr5 47043747 47043768 -156041764 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 47043805 47043831 -156041701 + AT_rich Low_complexity Low_complexity 1 26 0 19250 38 2 5 chr5 47044604 47047766 -156037766 - L1PA4 LINE L1 0 6155 2999 1536 166 78 51 chr5 47047934 47048148 -156037384 - MLT1A1 LTR MaLR 0 365 137 2281 115 0 0 chr5 47048148 47048452 -156037080 - AluY SINE Alu -7 304 1 1536 166 78 51 chr5 47048452 47048569 -156036963 - MLT1A1 LTR MaLR -228 137 25 188 204 0 41 chr5 47048575 47048624 -156036908 + MIR SINE MIR 94 140 -68 231 233 49 14 chr5 47049395 47049514 -156036018 + MIR SINE MIR 47 208 -54 674 185 25 49 chr5 47050697 47050859 -156034673 - L1PB4 LINE L1 -1 6155 5998 5606 223 30 131 chr5 47051009 47053200 -156032332 - L1PA15-16 LINE L1 -4469 2380 415 4701 152 26 23 chr5 47053182 47054039 -156031493 + L1PA16 LINE L1 5308 6166 0 * 295 183 28 28 chr5 47054048 47054119 -156031413 - L1PA15-16 LINE L1 -6503 346 276 2861 219 28 56 chr5 47054123 47054978 -156030554 - L1 LINE L1 -1490 4656 3826 252 315 212 0 chr5 47054978 47055143 -156030389 + MIR SINE MIR 61 260 -2 306 191 56 56 chr5 47056006 47056095 -156029437 - L2 LINE L2 -65 3248 3160 239 299 81 0 chr5 47056133 47056220 -156029312 - L2 LINE L2 -277 3036 2943 2326 88 0 31 chr5 47057185 47057505 -156028027 + AluY SINE Alu 1 310 -1 187 313 62 0 chr5 47057700 47057780 -156027752 - MIR SINE MIR -27 235 151 1814 277 89 58 chr5 47058603 47058705 -156026827 - L2 LINE L2 -98 3215 3118 1244 227 102 21 chr5 47058705 47059137 -156026395 - MLT1C LTR MaLR 0 467 1 1814 277 89 58 chr5 47059137 47059670 -156025862 - L2 LINE L2 -195 3118 2540 1571 190 10 20 chr5 47059670 47059970 -156025562 - AluJb SINE Alu -10 302 6 1814 277 89 58 chr5 47059970 47060246 -156025286 - L2 LINE L2 -773 2540 2274 3138 47 0 0 chr5 47060374 47060759 -156024773 + L1PA4 LINE L1 5764 6148 -7 25 0 0 0 chr5 47060759 47060784 -156024748 + AT_rich Low_complexity Low_complexity 1 25 0 4384 170 9 9 chr5 47060784 47062034 -156023498 + L1PA13 LINE L1 4507 5754 -411 5874 163 44 7 chr5 47062058 47062132 -156023400 + L1PA13 LINE L1 4148 4218 -1945 1988 143 3 0 chr5 47062132 47062418 -156023114 - AluSx SINE Alu -23 289 3 5874 163 44 7 chr5 47062418 47063648 -156021884 + L1PA13 LINE L1 4218 5543 -620 250 78 20 20 chr5 47063648 47063699 -156021833 + (TA)n Simple_repeat Simple_repeat 1 51 0 5874 163 44 7 chr5 47063699 47064319 -156021213 + L1PA13 LINE L1 5543 6138 -25 1014 148 92 0 chr5 47064319 47064515 -156021017 + L1PA13 LINE L1 5948 6161 -2 35 0 0 0 chr5 47064621 47064656 -156020876 + AT_rich Low_complexity Low_complexity 1 35 0 2168 181 46 2 chr5 47064833 47065243 -156020289 + MSTA LTR MaLR 1 428 0 221 304 185 0 chr5 47066087 47066179 -156019353 - MIR SINE MIR -64 144 36 380 292 44 0 chr5 47066395 47066508 -156019024 + MIR SINE MIR 37 154 -108 4363 171 56 29 chr5 47066538 47066717 -156018815 - L1MA7 LINE L1 -2 6289 6116 2354 53 0 27 chr5 47066717 47067017 -156018515 - AluY SINE Alu -19 292 1 4363 171 56 29 chr5 47067017 47068242 -156017290 - L1MA7 LINE L1 -175 6116 4848 2207 161 60 60 chr5 47068248 47068864 -156016668 + L1MA7 LINE L1 4219 4834 -1312 402 38 0 0 chr5 47069130 47069183 -156016349 - MADE1 DNA Mariner -27 53 1 199 277 31 31 chr5 47071515 47071580 -156013952 + MIR SINE MIR 77 141 -67 395 227 116 12 chr5 47071589 47071761 -156013771 + L1MB3 LINE L1 5987 6176 -7 314 271 75 0 chr5 47071779 47071886 -156013646 + MIR SINE MIR 148 262 0 304 274 43 43 chr5 47072511 47072628 -156012904 - MIR3 SINE MIR -6 202 86 * 1527 340 88 17 chr5 47072627 47073819 -156011713 + L2 LINE L2 882 2158 -1156 4059 32 4 12 chr5 47073825 47074320 -156011212 + L1PA4 LINE L1 5662 6152 -3 200 349 47 9 chr5 47074352 47074458 -156011074 + L2 LINE L2 2403 2512 -802 200 222 130 19 chr5 47074458 47074512 -156011020 - L2 LINE L2 0 3313 3254 2040 126 7 29 chr5 47074772 47075082 -156010450 - AluSc SINE Alu -6 303 1 222 264 19 19 chr5 47075111 47075217 -156010315 + T-rich Low_complexity Low_complexity 2 107 0 41274 47 2 1 chr5 47075220 47081367 -156004165 - L1PA3 LINE L1 -3 6152 1 1130 141 40 80 chr5 47081423 47081699 -156003833 - MLT2C2 LTR ERVL -199 265 1 1815 173 0 0 chr5 47083912 47084190 -156001342 + AluSx SINE Alu 1 278 -34 368 123 0 15 chr5 47084195 47084260 -156001272 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 189 0 0 0 chr5 47084595 47084616 -156000916 + (AGATG)n Simple_repeat Simple_repeat 3 23 0 1342 241 60 42 chr5 47085696 47086148 -155999384 - MLT1C LTR MaLR -3 464 5 1306 220 0 20 chr5 47087736 47088036 -155997496 - MLT1A1 LTR MaLR 0 365 72 212 366 61 0 chr5 47088159 47088241 -155997291 - L2 LINE L2 -28 3285 3199 499 298 89 21 chr5 47090505 47090713 -155994819 + MIR SINE MIR 6 233 -29 308 311 31 52 chr5 47090713 47090906 -155994626 - MER5A DNA MER1_type 0 189 1 499 298 89 21 chr5 47090906 47090932 -155994600 + MIR SINE MIR 233 256 -6 245 305 0 0 chr5 47091154 47091213 -155994319 - L2 LINE L2 0 3313 3255 735 243 46 46 chr5 47091219 47091375 -155994157 + MER58A DNA MER1_type 6 164 -2256 1819 178 25 8 chr5 47091375 47091730 -155993802 - MLT1A1 LTR MaLR 0 365 5 735 243 46 46 chr5 47091730 47091791 -155993741 + MER58A DNA MER1_type 163 223 -1 226 195 0 65 chr5 47092054 47092131 -155993401 - LTR67 LTR ERVL -28 529 458 379 231 59 163 chr5 47092928 47093059 -155992473 - MIR SINE MIR -25 237 94 2374 106 0 0 chr5 47093059 47093361 -155992171 + AluSx SINE Alu 1 302 -10 379 231 59 163 chr5 47093361 47093378 -155992154 - MIR SINE MIR -168 94 77 2097 134 3 13 chr5 47093378 47093691 -155991841 + AluSq SINE Alu 1 310 -3 379 231 59 163 chr5 47093691 47093762 -155991770 - MIR SINE MIR -185 77 40 974 178 15 5 chr5 47094317 47094519 -155991013 - MER3 DNA MER1_type -5 204 1 255 336 25 34 chr5 47094534 47094653 -155990879 + MER5A DNA MER1_type 47 164 -25 255 326 143 0 chr5 47095092 47095190 -155990342 + L2 LINE L2 3187 3298 -15 662 294 49 46 chr5 47096010 47096360 -155989172 - LTR16A1 LTR ERVL 0 457 107 635 168 71 0 chr5 47097129 47097242 -155988290 - FLAM_C SINE Alu -8 125 5 4476 278 99 10 chr5 47097479 47099012 -155986520 + L2 LINE L2 1307 2975 -339 652 274 125 40 chr5 47099466 47099795 -155985737 + L2 LINE L2 2953 3309 -4 377 321 19 27 chr5 47100465 47100655 -155984877 + MIR SINE MIR 23 210 -52 22 80 0 0 chr5 47100771 47100821 -155984711 + AT_rich Low_complexity Low_complexity 1 50 0 1446 235 93 88 chr5 47101094 47101750 -155983782 + LTR41 LTR ERVL 1 663 -110 3636 103 0 8 chr5 47101750 47102265 -155983267 - MER9 LTR ERVK 0 511 1 1446 235 93 88 chr5 47102265 47102362 -155983170 + LTR41 LTR ERVL 663 758 -15 23 68 0 0 chr5 47102715 47102759 -155982773 + AT_rich Low_complexity Low_complexity 1 44 0 494 204 0 0 chr5 47102985 47103073 -155982459 - Tigger7 DNA MER2_type -2 2489 2402 1437 171 32 14 chr5 47103075 47103497 -155982035 - Tigger7 DNA MER2_type -1966 521 5 1392 244 52 14 chr5 47103498 47103863 -155981669 + MLT1C LTR MaLR 86 464 -3 225 343 57 0 chr5 47103863 47103933 -155981599 - L2 LINE L2 -39 3233 3160 300 53 0 0 chr5 47104173 47104211 -155981321 + (CA)n Simple_repeat Simple_repeat 2 39 0 2048 143 39 20 chr5 47104367 47104724 -155980808 + THE1B LTR MaLR 1 364 0 238 273 8 16 chr5 47105186 47105308 -155980224 + L1MD3 LINE L1 7904 8042 0 446 253 76 89 chr5 47105736 47105961 -155979571 + MLT1K LTR MaLR 344 565 -23 1768 199 215 11 chr5 47105989 47106538 -155978994 + LTR65 LTR ERV1 1 661 -8 405 260 167 0 chr5 47106711 47106861 -155978671 + MER5A DNA MER1_type 9 183 -6 212 169 0 34 chr5 47107472 47107531 -155978001 + GA-rich Low_complexity Low_complexity 5 61 0 1693 163 0 42 chr5 47107550 47107856 -155977676 + AluJo SINE Alu 19 311 -1 261 83 0 0 chr5 47110446 47110482 -155975050 + (A)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr5 47110764 47110788 -155974744 + AT_rich Low_complexity Low_complexity 1 24 0 597 148 119 45 chr5 47112056 47112232 -155973300 + MER53 DNA DNA 1 189 0 198 0 0 0 chr5 47114227 47114249 -155971283 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr5 47114935 47114957 -155970575 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 47115176 47115199 -155970333 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 47115302 47115327 -155970205 + AT_rich Low_complexity Low_complexity 1 25 0 27 73 0 0 chr5 47115824 47115879 -155969653 + AT_rich Low_complexity Low_complexity 1 55 0 1069 112 0 11 chr5 47116400 47116579 -155968953 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 294 328 69 23 chr5 47117973 47118104 -155967428 - L2 LINE L2 0 3272 3136 994 246 36 58 chr5 47118137 47118498 -155967034 - L2 LINE L2 -2 3311 2959 572 311 17 11 chr5 47118538 47118715 -155966817 - L2 LINE L2 -448 2866 2689 199 294 5 163 chr5 47118718 47118902 -155966630 - L2 LINE L2 -176 3096 2942 186 189 0 0 chr5 47119155 47119192 -155966340 + GA-rich Low_complexity Low_complexity 2 38 0 18189 166 50 15 chr5 47119311 47124335 -155961197 + L1MA1 LINE L1 15 4860 -2861 2524 46 0 13 chr5 47124335 47124638 -155960894 - AluY SINE Alu -12 299 1 18189 166 50 15 chr5 47124638 47126537 -155958995 + L1MA1 LINE L1 4860 7227 -494 2152 130 3 3 chr5 47126537 47126845 -155958687 + AluSc SINE Alu 1 308 -1 18189 166 50 15 chr5 47126845 47127359 -155958173 + L1MA1 LINE L1 7227 7721 0 878 361 107 12 chr5 47127371 47128063 -155957469 - L2 LINE L2 -553 2761 2004 714 186 83 0 chr5 47129269 47129414 -155956118 - MER106B DNA MER1_type -1 1058 902 2104 181 6 6 chr5 47129600 47129965 -155955567 - MLT1A1 LTR MaLR 0 365 1 239 217 0 0 chr5 47129994 47130040 -155955492 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 958 188 0 0 chr5 47131653 47131813 -155953719 - FRAM SINE Alu -16 160 1 446 255 268 0 chr5 47131933 47132086 -155953446 + MIR SINE MIR 32 225 -37 392 379 40 0 chr5 47132742 47132916 -155952616 + L2 LINE L2 2717 2897 -417 219 109 0 43 chr5 47132949 47132995 -155952537 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 555 240 104 0 chr5 47133159 47133284 -155952248 + L2 LINE L2 3134 3271 -1 49 90 0 0 chr5 47133602 47133735 -155951797 + AT_rich Low_complexity Low_complexity 1 133 0 17755 33 2 0 chr5 47134028 47136962 -155948570 + L1PA3 LINE L1 3228 6167 0 243 0 0 0 chr5 47136967 47136994 -155948538 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 351 343 0 10 chr5 47137819 47137918 -155947614 - L2 LINE L2 -3 3310 3213 261 281 146 0 chr5 47139528 47139617 -155945915 - L2 LINE L2 -2 3270 3169 467 305 90 0 chr5 47139902 47140069 -155945463 + MIR SINE MIR 20 201 -61 310 250 14 0 chr5 47140081 47140153 -155945379 + MIR SINE MIR 4 76 -186 1178 272 98 24 chr5 47140378 47140796 -155944736 + LTR16A LTR ERVL 1 448 -2 591 286 119 35 chr5 47142490 47142833 -155942699 - L3 LINE CR1 -240 1337 966 23 0 0 0 chr5 47148638 47148661 -155936871 + AT_rich Low_complexity Low_complexity 1 23 0 365 289 97 9 chr5 47148685 47148799 -155936733 - L2 LINE L2 -2 3270 3147 372 328 38 0 chr5 47149097 47149228 -155936304 - MIR3 SINE MIR -23 185 50 315 0 0 0 chr5 47149527 47149562 -155935970 + (CA)n Simple_repeat Simple_repeat 2 36 0 2345 96 0 3 chr5 47149709 47150022 -155935510 - AluSx SINE Alu 0 312 1 1712 150 50 47 chr5 47150022 47150393 -155935139 - L1MC2 LINE L1 -27 6317 5943 32 0 0 0 chr5 47150409 47150441 -155935091 + AT_rich Low_complexity Low_complexity 1 32 0 534 115 0 88 chr5 47150442 47150555 -155934977 - L1MB3 LINE L1 -28 6155 6053 * 2625 156 49 30 chr5 47150538 47151064 -155934468 - L1MC2 LINE L1 -384 5960 5425 291 28 0 0 chr5 47152476 47152512 -155933020 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 22 94 0 0 chr5 47154873 47154937 -155930595 + AT_rich Low_complexity Low_complexity 1 64 0 316 263 71 20 chr5 47155169 47155268 -155930264 + L2 LINE L2 3139 3242 -30 342 287 158 24 chr5 47155376 47155540 -155929992 + MIR3 SINE MIR 16 201 -7 263 344 46 58 chr5 47156013 47156272 -155929260 + L2 LINE L2 2807 3062 -210 184 341 45 11 chr5 47156273 47156361 -155929171 + L2 LINE L2 3163 3253 -19 2338 68 0 29 chr5 47156935 47157242 -155928290 - AluY SINE Alu -13 298 1 704 250 0 38 chr5 47157375 47157559 -155927973 - L2 LINE L2 -1 3312 3136 197 329 51 101 chr5 47157654 47157812 -155927720 + L2 LINE L2 3078 3227 -45 * 490 338 76 59 chr5 47157811 47158441 -155927091 + L2 LINE L2 1987 2627 -687 313 337 29 77 chr5 47158528 47158774 -155926758 + L2 LINE L2 2616 2849 -465 1891 116 0 4 chr5 47159860 47160128 -155925404 + AluSq SINE Alu 39 305 -8 705 280 64 4 chr5 47161900 47162136 -155923396 - MIR SINE MIR 0 262 13 2489 96 8 3 chr5 47162151 47162505 -155923027 - L1PB1 LINE L1 -1 6150 5795 5110 200 22 9 chr5 47162510 47163620 -155921912 - L1 LINE L1 -1947 4199 3076 7201 101 19 17 chr5 47163622 47165195 -155920337 - L1PBa LINE L1 -4512 2351 634 976 211 5 0 chr5 47165195 47165394 -155920138 - L1PBa LINE L1 -6663 200 1 452 356 35 11 chr5 47166148 47166358 -155919174 + MIR SINE MIR 8 220 -42 296 255 47 47 chr5 47166907 47167013 -155918519 - MIR SINE MIR -56 152 47 196 260 260 10 chr5 47167076 47167172 -155918360 + L2 LINE L2 3137 3256 -16 23 0 0 0 chr5 47167207 47167230 -155918302 + AT_rich Low_complexity Low_complexity 1 23 0 248 289 31 41 chr5 47167638 47167735 -155917797 + MARNA DNA Mariner 447 542 -44 1048 168 28 0 chr5 47167935 47168114 -155917418 + MER20 DNA MER1_type 36 219 0 360 0 0 0 chr5 47169750 47169790 -155915742 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1841 56 9 0 chr5 47169790 47170023 -155915509 - L1PA5 LINE L1 -12 6142 5908 221 250 18 0 chr5 47170414 47170470 -155915062 + (CA)n Simple_repeat Simple_repeat 2 58 0 5922 97 11 10 chr5 47170483 47171845 -155913687 - L1PA10 LINE L1 0 6168 4784 4172 124 0 94 chr5 47171850 47172658 -155912874 - L1PA10 LINE L1 -1548 4598 3867 1766 160 7 0 chr5 47173325 47173613 -155911919 - AluSx SINE Alu -22 290 1 595 186 17 0 chr5 47175114 47175232 -155910300 + MER90 LTR ERV1 2 121 -454 * 1433 234 45 9 chr5 47175231 47175568 -155909964 + MER90 LTR ERV1 266 614 0 203 229 82 66 chr5 47175988 47176049 -155909483 - MIR3 SINE MIR -39 169 108 198 0 0 0 chr5 47176111 47176133 -155909399 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 459 0 0 0 chr5 47176132 47176183 -155909349 + (CA)n Simple_repeat Simple_repeat 1 51 0 2228 227 79 60 chr5 47176498 47176595 -155908937 + MER72 LTR ERV1 1 95 -627 1865 150 0 0 chr5 47176595 47176861 -155908671 + AluSx SINE Alu 1 266 -46 197 0 71 0 chr5 47176868 47176896 -155908636 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2228 227 79 60 chr5 47176896 47177496 -155908036 + MER72 LTR ERV1 100 720 -2 186 143 0 0 chr5 47177513 47177548 -155907984 + (TTC)n Simple_repeat Simple_repeat 2 36 0 302 271 27 43 chr5 47178040 47178178 -155907354 + MER5A DNA MER1_type 44 172 -6 242 314 88 0 chr5 47178247 47178349 -155907183 + MIR SINE MIR 48 158 -104 253 291 13 0 chr5 47178358 47178437 -155907095 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 327 130 0 0 chr5 47178971 47179025 -155906507 + (GA)n Simple_repeat Simple_repeat 2 55 0 436 257 9 26 chr5 47179247 47179360 -155906172 + MIR SINE MIR 31 141 -67 432 294 44 40 chr5 47179662 47179889 -155905643 + MIR SINE MIR 25 247 -15 421 364 48 10 chr5 47180944 47181153 -155904379 + MIR SINE MIR 46 262 0 298 327 10 10 chr5 47181675 47181776 -155903756 - MIR3 SINE MIR 0 208 108 313 289 7 60 chr5 47182477 47182626 -155902906 + MER103 DNA DNA 16 156 -10 2044 201 56 2 chr5 47185126 47185569 -155899963 + MLT1C LTR MaLR 1 467 0 224 254 15 0 chr5 47187715 47187782 -155897750 + (TA)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 47188284 47188305 -155897227 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 47188521 47188550 -155896982 + AT_rich Low_complexity Low_complexity 1 29 0 1222 247 188 27 chr5 47189413 47189924 -155895608 + MLT1E LTR MaLR 1 593 0 775 180 212 14 chr5 47190290 47190507 -155895025 + MLT1E1 LTR MaLR 1 260 -394 1139 229 41 11 chr5 47191018 47191285 -155894247 + MLT1E1 LTR MaLR 380 654 0 227 353 188 23 chr5 47191582 47191715 -155893817 - L2 LINE L2 -6 3266 3112 184 253 0 76 chr5 47191973 47192052 -155893480 - L2 LINE L2 -78 3235 3163 296 160 0 0 chr5 47192074 47192124 -155893408 - L2 LINE L2 -1 3271 3222 875 294 141 30 chr5 47192138 47192761 -155892771 + Charlie7 DNA MER1_type 34 725 -1887 30 45 0 0 chr5 47192797 47192841 -155892691 + AT_rich Low_complexity Low_complexity 1 44 0 2684 232 28 28 chr5 47193689 47194466 -155891066 - L1ME1 LINE L1 -6 6229 5453 19425 172 25 20 chr5 47194486 47197482 -155888050 + L1MA1 LINE L1 23 3003 -4718 2242 93 6 38 chr5 47197482 47197795 -155887737 + AluY SINE Alu 1 303 -8 19425 172 25 20 chr5 47197795 47199985 -155885547 + L1MA1 LINE L1 3003 5181 -2540 1986 144 123 26 chr5 47199985 47200375 -155885157 + MSTA LTR MaLR 1 428 0 8741 158 13 40 chr5 47200377 47201997 -155883535 + MSTA-int LTR MaLR 3 1578 -2 1986 167 132 0 chr5 47201999 47202377 -155883155 + MSTA LTR MaLR 1 428 0 19425 172 25 20 chr5 47202377 47204841 -155880691 + L1MA1 LINE L1 5181 7717 -4 1395 254 139 7 chr5 47204877 47205431 -155880101 - L1ME1 LINE L1 -763 5452 4826 235 271 17 0 chr5 47205432 47205491 -155880041 + MLT1F LTR MaLR 1 60 -482 2784 255 101 13 chr5 47205503 47207002 -155878530 - L1ME1 LINE L1 -2534 3681 2088 321 195 26 0 chr5 47207159 47207236 -155878296 - L1MC4 LINE L1 -3 8039 7961 4494 10 0 0 chr5 47207251 47207762 -155877770 - L1HS LINE L1 0 6155 5645 186 389 36 14 chr5 47208001 47208140 -155877392 + MIR SINE MIR 49 190 -72 210 37 0 0 chr5 47209618 47209645 -155875887 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 313 304 135 75 chr5 47209914 47210417 -155875115 + L2 LINE L2 1968 2500 -814 202 256 0 0 chr5 47212089 47212132 -155873400 - MER5A DNA MER1_type -137 52 10 253 259 0 0 chr5 47212244 47212298 -155873234 + (CA)n Simple_repeat Simple_repeat 2 55 0 1041 322 35 37 chr5 47213160 47213623 -155871909 + L2 LINE L2 2847 3308 -5 247 264 97 28 chr5 47213781 47213853 -155871679 + L2 LINE L2 3237 3313 0 2172 93 0 26 chr5 47213990 47214300 -155871232 - AluSc SINE Alu -4 305 4 58 0 0 0 chr5 47215572 47215630 -155869902 + AT_rich Low_complexity Low_complexity 1 58 0 233 289 24 0 chr5 47215699 47215782 -155869750 - L1MC4 LINE L1 -1341 6701 6617 181 351 0 39 chr5 47217152 47217229 -155868303 - L2 LINE L2 -12 3260 3187 294 307 29 29 chr5 47217636 47217773 -155867759 + L1MEd LINE L1 94 230 -5889 753 47 0 19 chr5 47217988 47218094 -155867438 - AluSp SINE Alu 0 313 210 712 117 10 0 chr5 47218084 47218187 -155867345 - AluSp SINE Alu -126 187 84 * 3105 176 30 2 chr5 47218378 47218913 -155866619 + MER44D DNA MER2_type 1 605 0 229 284 68 27 chr5 47218952 47219026 -155866506 - MIR SINE MIR -114 94 18 264 297 109 0 chr5 47219481 47219582 -155865950 - MIR3 SINE MIR -15 193 82 646 306 113 10 chr5 47219582 47220049 -155865483 - LTR33 LTR ERVL 0 521 1 21 57 0 0 chr5 47221937 47221972 -155863560 + AT_rich Low_complexity Low_complexity 1 35 0 697 243 115 43 chr5 47223429 47223664 -155861868 + MIR SINE MIR 10 261 -1 27 0 0 0 chr5 47223788 47223815 -155861717 + AT_rich Low_complexity Low_complexity 1 27 0 2443 71 0 0 chr5 47225191 47225501 -155860031 + AluY SINE Alu 1 310 -1 233 259 82 67 chr5 47226075 47226210 -155859322 + MIR SINE MIR 8 144 -118 338 307 43 33 chr5 47226237 47226966 -155858566 - L1MEd LINE L1 -1453 4676 3750 374 310 106 29 chr5 47226972 47227217 -155858315 - L1MEd LINE L1 -2549 3580 3317 739 32 0 0 chr5 47227432 47227525 -155858007 + AluS SINE Alu 1 93 -219 1678 136 54 30 chr5 47227574 47227906 -155857626 - L1MA9 LINE L1 0 6312 5973 512 298 104 47 chr5 47227924 47228030 -155857502 - L1MEd LINE L1 -3040 3089 2990 2363 69 14 0 chr5 47228030 47228319 -155857213 + AluSp SINE Alu 1 293 -20 512 298 104 47 chr5 47228319 47229042 -155856490 - L1MEd LINE L1 -3139 2990 2213 6074 139 40 3 chr5 47229085 47230075 -155855457 - L1MC1 LINE L1 -6 6327 5301 21 36 0 0 chr5 47230080 47230108 -155855424 + AT_rich Low_complexity Low_complexity 1 28 0 625 275 115 26 chr5 47230520 47231162 -155854370 - L1MEd LINE L1 -4500 1629 943 225 275 14 0 chr5 47231804 47231873 -155853659 + GA-rich Low_complexity Low_complexity 1 70 0 24 32 0 0 chr5 47232014 47232045 -155853487 + AT_rich Low_complexity Low_complexity 1 31 0 816 261 20 0 chr5 47232174 47232373 -155853159 + MIR SINE MIR 49 251 -11 456 293 102 0 chr5 47235286 47235491 -155850041 + MIR SINE MIR 33 258 -4 198 129 0 0 chr5 47236362 47236393 -155849139 + MIR SINE MIR 84 114 -94 * 337 258 108 0 chr5 47236391 47236484 -155849048 - L2 LINE L2 -2 3311 3209 244 375 0 10 chr5 47236582 47236678 -155848854 - MER91A DNA MER1_type -82 114 20 333 317 60 57 chr5 47237125 47237478 -155848054 - L1ME4a LINE L1 -73 6048 5695 280 224 55 121 chr5 47237592 47237757 -155847775 + MIR SINE MIR 1 154 -54 434 279 49 0 chr5 47238421 47238543 -155846989 + MIR SINE MIR 7 134 -128 472 331 54 54 chr5 47239583 47239998 -155845534 - L2 LINE L2 -257 3056 2629 407 241 128 14 chr5 47240011 47240152 -155845380 + MLT1J2 LTR MaLR 1 157 -293 2529 143 2 12 chr5 47240428 47240828 -155844704 + MER61B LTR ERV1 1 396 -29 946 243 106 84 chr5 47241382 47241880 -155843652 + MLT1J LTR MaLR 1 509 -2 651 266 14 138 chr5 47242214 47242343 -155843189 + MIR SINE MIR 8 83 -179 2442 90 0 0 chr5 47242343 47242654 -155842878 - AluSx SINE Alu 0 312 2 651 266 14 138 chr5 47242654 47242814 -155842718 + MIR SINE MIR 83 261 -1 310 255 19 38 chr5 47244581 47244687 -155840845 + MIR SINE MIR 107 210 -52 314 168 64 24 chr5 47245142 47245257 -155840275 + (TA)n Simple_repeat Simple_repeat 2 124 -7 1799 156 51 12 chr5 47245257 47245591 -155839941 + MER7A DNA MER2_type 2 346 0 314 168 64 24 chr5 47245591 47245600 -155839932 + (TA)n Simple_repeat Simple_repeat 124 131 0 478 222 0 17 chr5 47247830 47247947 -155837585 - L1 LINE L1 -990 5156 5042 2359 57 37 3 chr5 47248025 47248324 -155837208 + AluY SINE Alu 1 309 -2 221 290 138 28 chr5 47248672 47248817 -155836715 - MIR SINE MIR -56 206 46 983 286 37 0 chr5 47251606 47251890 -155833642 - LTR16C LTR ERVL -3 473 194 1979 134 19 8 chr5 47254993 47255359 -155830173 - L1MA8 LINE L1 0 6291 5922 410 289 66 57 chr5 47255603 47255814 -155829718 + MIR SINE MIR 37 249 -13 1628 226 45 54 chr5 47256222 47256371 -155829161 + MLT1C LTR MaLR 6 155 -312 1901 193 11 3 chr5 47256371 47256729 -155828803 - MLT1A1 LTR MaLR 0 365 5 1628 226 45 54 chr5 47256729 47256920 -155828612 + MLT1C LTR MaLR 155 343 -124 2132 137 13 24 chr5 47256920 47257299 -155828233 - THE1C LTR MaLR 0 375 1 1628 226 45 54 chr5 47257299 47257421 -155828111 + MLT1C LTR MaLR 343 465 -2 305 349 38 0 chr5 47258210 47258342 -155827190 - L2 LINE L2 -208 3105 2969 1993 171 0 46 chr5 47258691 47259059 -155826473 + MLT1A1 LTR MaLR 14 364 -1 376 268 12 0 chr5 47260639 47260721 -155824811 - L2 LINE L2 -5 3308 3226 191 313 0 0 chr5 47261979 47262027 -155823505 - L2 LINE L2 -11 3261 3214 417 306 192 24 chr5 47264476 47264773 -155820759 - L2 LINE L2 -978 2336 1990 1073 118 7 0 chr5 47264779 47264932 -155820600 + AluSp/q SINE Alu 158 311 -2 296 286 107 51 chr5 47264941 47265119 -155820413 - L2 LINE L2 -1334 1980 1793 1761 192 28 11 chr5 47265295 47265654 -155819878 - MLT1A1 LTR MaLR 0 365 1 1069 50 0 21 chr5 47266575 47266715 -155818817 + L1PA7 LINE L1 6018 6154 0 580 265 136 15 chr5 47266795 47267119 -155818413 - L1MEd LINE L1 -4886 1233 871 297 0 0 0 chr5 47267471 47267504 -155818028 + (T)n Simple_repeat Simple_repeat 1 33 0 8894 182 20 18 chr5 47268532 47270129 -155815403 - L1MA7 LINE L1 -2 6289 4680 2178 136 13 0 chr5 47270129 47270437 -155815095 - AluSq SINE Alu -1 312 1 8894 182 20 18 chr5 47270437 47271789 -155813743 - L1MA7 LINE L1 -1611 4680 3333 510 343 102 69 chr5 47272236 47272904 -155812628 + HAL1 LINE L1 12 701 -1806 468 254 55 10 chr5 47273030 47273229 -155812303 - MER31B LTR ERV1 0 661 259 2066 190 53 24 chr5 47273229 47273698 -155811834 + L1M1 LINE L1 24 506 -7059 1247 123 9 4 chr5 47273674 47273902 -155811630 + L1M1 LINE L1 2967 3195 -4370 * 514 187 24 0 chr5 47273902 47274025 -155811507 + CT-rich Low_complexity Low_complexity 1 126 0 609 297 51 49 chr5 47274318 47274668 -155810864 - LTR16A1 LTR ERVL 0 457 107 1641 136 145 21 chr5 47275790 47276122 -155809410 - THE1C LTR MaLR 0 375 3 554 223 67 57 chr5 47276998 47277191 -155808341 + MER106A DNA MER1_type 37 231 -5 563 187 0 0 chr5 47277481 47277588 -155807944 + FRAM SINE Alu 70 176 0 590 261 208 13 chr5 47277816 47278233 -155807299 + LTR50 LTR ERVL 3 598 -197 274 161 36 0 chr5 47278291 47278347 -155807185 + LTR50 LTR ERVL 728 785 -10 1396 223 66 18 chr5 47278571 47279010 -155806522 + MLT1C LTR MaLR 8 467 0 459 304 61 17 chr5 47280201 47280382 -155805150 + MIR SINE MIR 49 237 -25 1143 274 25 38 chr5 47281350 47281748 -155803784 - L2 LINE L2 -831 2483 2091 469 378 101 16 chr5 47281777 47282290 -155803242 - L3 LINE CR1 -353 1224 668 1979 125 9 34 chr5 47282320 47282640 -155802892 - AluSx SINE Alu 0 312 1 34 24 0 0 chr5 47282777 47282818 -155802714 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 47283070 47283099 -155802433 + AT_rich Low_complexity Low_complexity 1 29 0 3447 29 0 2 chr5 47283556 47283966 -155801566 - L1PA4 LINE L1 -3 6152 5744 428 384 47 41 chr5 47284234 47284677 -155800855 + L1MEd LINE L1 356 801 -5404 496 266 79 26 chr5 47284810 47285152 -155800380 + L1MEd LINE L1 981 1340 -4865 1985 172 9 20 chr5 47285317 47285795 -155799737 + L1P3 LINE L1 6 786 -5675 474 18 0 0 chr5 47286029 47286084 -155799448 + (TG)n Simple_repeat Simple_repeat 2 56 0 2243 215 65 19 chr5 47286084 47286121 -155799411 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 47286121 47286191 -155799341 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2243 215 65 19 chr5 47286191 47286471 -155799061 - MLT2B3 LTR ERVL -37 517 197 1801 165 7 0 chr5 47286471 47286805 -155798727 - AluSx SINE Alu 0 336 1 2243 215 65 19 chr5 47286805 47287011 -155798521 - MLT2B3 LTR ERVL -357 197 2 354 100 62 0 chr5 47287011 47287091 -155798441 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 1086 196 20 125 chr5 47287109 47287517 -155798015 - MLT2D LTR ERVL -48 366 2 453 287 31 36 chr5 47287970 47288165 -155797367 + L1MEd LINE L1 2103 2296 -4100 375 229 99 63 chr5 47288248 47288471 -155797061 + HAL1 LINE L1 2258 2488 -19 719 233 93 5 chr5 47289203 47289396 -155796136 - MER63A DNA MER1_type 0 210 1 490 272 60 32 chr5 47289511 47290045 -155795487 + L1MCc LINE L1 1126 1847 -4891 1455 224 47 0 chr5 47290104 47290426 -155795106 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 47290427 47290479 -155795053 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2520 53 20 0 chr5 47290525 47290827 -155794705 + AluY SINE Alu 1 308 -3 222 118 0 0 chr5 47290830 47290864 -155794668 + (TA)n Simple_repeat Simple_repeat 1 34 0 599 255 121 11 chr5 47291154 47291526 -155794006 + L1MCc LINE L1 2564 2976 -4146 2849 13 0 0 chr5 47292239 47292550 -155792982 + AluYb8 SINE Alu 1 311 -7 29122 53 2 2 chr5 47293066 47297724 -155787808 - L1PA5 LINE L1 0 6154 1495 4014 228 76 29 chr5 47308161 47309599 -155775933 + L1MCc LINE L1 3453 4958 -1983 660 349 63 42 chr5 47310211 47310589 -155774943 + L2 LINE L2 2887 3272 0 240 226 24 60 chr5 47310631 47310715 -155774817 - MIR3 SINE MIR -3 205 125 2669 110 22 3 chr5 47310822 47311206 -155774326 + MLT2A1 LTR ERVL 1 523 -31 468 0 0 0 chr5 47311206 47311258 -155774274 + (TA)n Simple_repeat Simple_repeat 2 53 0 2669 110 22 3 chr5 47311258 47311291 -155774241 + MLT2A1 LTR ERVL 523 554 0 2538 138 8 25 chr5 47311297 47311825 -155773707 + HERVL-A1 LTR ERVL 20 538 -5116 202 383 48 36 chr5 47311987 47312235 -155773297 + L2 LINE L2 1345 1595 -1719 1765 324 72 44 chr5 47312267 47313571 -155771961 + L2 LINE L2 1688 3021 -251 1240 146 67 4 chr5 47313761 47314001 -155771531 - MER2 DNA MER2_type 0 345 91 767 277 83 70 chr5 47314206 47314820 -155770712 - L2 LINE L2 0 3313 2717 282 331 184 31 chr5 47314831 47315212 -155770320 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 47315237 47315273 -155770259 + AT_rich Low_complexity Low_complexity 1 36 0 183 364 33 66 chr5 47315610 47315761 -155769771 + MER5A DNA MER1_type 44 189 0 536 340 81 28 chr5 47315774 47316306 -155769226 + MLT1K LTR MaLR 3 562 -26 483 260 82 29 chr5 47318782 47319124 -155766408 + L1MEd LINE L1 981 1340 -4865 1978 169 9 23 chr5 47319289 47319775 -155765757 + L1P3 LINE L1 6 786 -5675 1641 218 37 97 chr5 47319964 47320002 -155765530 - MLT2B3 LTR ERVL 0 551 512 369 0 0 0 chr5 47320002 47320043 -155765489 + (TG)n Simple_repeat Simple_repeat 2 42 0 1641 218 37 97 chr5 47320043 47320080 -155765452 - MLT2B3 LTR ERVL -39 512 474 474 14 57 0 chr5 47320080 47320150 -155765382 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 1641 218 37 97 chr5 47320150 47320430 -155765102 - MLT2B3 LTR ERVL -77 474 179 374 36 36 0 chr5 47320430 47320485 -155765047 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 1736 166 11 0 chr5 47320485 47320763 -155764769 - AluSx SINE Alu -1 335 1 1641 218 37 97 chr5 47320763 47320936 -155764596 - MLT2B3 LTR ERVL -370 181 61 318 105 66 0 chr5 47321019 47321095 -155764437 + (TCTA)n Simple_repeat Simple_repeat 3 83 0 1198 192 52 119 chr5 47321095 47321522 -155764010 - MLT2D LTR ERVL -15 399 2 452 287 31 36 chr5 47321974 47322169 -155763363 + L1MEd LINE L1 2103 2296 -4100 329 221 11 11 chr5 47322252 47322347 -155763185 + HAL1 LINE L1 2258 2352 -155 5949 7 0 6 chr5 47322358 47323032 -155762500 + L1HS LINE L1 5486 6155 0 734 233 93 5 chr5 47323885 47324078 -155761454 - MER63A DNA MER1_type 0 210 1 568 271 60 32 chr5 47324193 47324727 -155760805 + L1MCc LINE L1 1126 1847 -4891 1565 221 47 0 chr5 47324786 47325108 -155760424 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 47325109 47325161 -155760371 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2495 53 20 0 chr5 47325207 47325506 -155760026 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 47325509 47325543 -155759989 + (TA)n Simple_repeat Simple_repeat 1 34 0 300 236 36 100 chr5 47325586 47325726 -155759806 + L1MCc LINE L1 2105 2235 -4887 422 281 22 43 chr5 47326003 47326142 -155759390 + MER5B DNA MER1_type 43 178 0 750 230 16 95 chr5 47326526 47326778 -155758754 + MIR SINE MIR 31 262 0 435 308 146 39 chr5 47326838 47327202 -155758330 + L1MCc LINE L1 3671 4073 -2868 476 209 22 0 chr5 47328320 47328411 -155757121 + MER63 DNA MER1_type 33 751 -311 257 152 22 0 chr5 47328415 47328461 -155757071 + MER63 DNA MER1_type 978 1024 -36 359 336 34 17 chr5 47328664 47328783 -155756749 - L2 LINE L2 -2 3270 3150 181 310 0 17 chr5 47329089 47329147 -155756385 - MIR SINE MIR -50 212 156 425 262 63 16 chr5 47330318 47330444 -155755088 + L2 LINE L2 3182 3313 0 23 0 0 0 chr5 47332507 47332530 -155753002 + AT_rich Low_complexity Low_complexity 1 23 0 3763 194 31 12 chr5 47332829 47334087 -155751445 + L1MB2 LINE L1 4389 5680 -491 1805 123 31 27 chr5 47334090 47334383 -155751149 - MER7A DNA MER2_type 0 346 55 2297 171 6 49 chr5 47334384 47334852 -155750680 + L1MB2 LINE L1 5688 6135 -36 22 0 0 0 chr5 47334858 47334880 -155750652 + AT_rich Low_complexity Low_complexity 1 22 0 366 222 0 0 chr5 47335141 47335213 -155750319 - L2 LINE L2 0 3272 3201 13892 148 24 10 chr5 47335453 47336064 -155749468 - Tigger1 DNA MER2_type 0 2418 1817 2334 78 0 10 chr5 47336064 47336358 -155749174 + AluY SINE Alu 1 291 -20 13892 148 24 10 chr5 47336358 47338129 -155747403 - Tigger1 DNA MER2_type -601 1817 1 262 325 117 0 chr5 47338497 47338617 -155746915 + MIR3 SINE MIR 63 196 -12 744 223 69 6 chr5 47338692 47338867 -155746665 + MER5A DNA MER1_type 1 186 -3 248 232 18 0 chr5 47339160 47339216 -155746316 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 186 321 49 12 chr5 47340010 47340091 -155745441 + MIR SINE MIR 108 191 -71 336 310 41 41 chr5 47340270 47340441 -155745091 - MIR SINE MIR -70 192 22 2359 98 0 0 chr5 47340512 47340818 -155744714 - AluSc SINE Alu 0 309 4 4453 237 56 30 chr5 47340845 47343102 -155742430 + L1ME1 LINE L1 3839 6156 -10 7990 83 4 18 chr5 47343375 47344462 -155741070 + MER11C LTR ERVK 1 1071 0 354 294 153 6 chr5 47344539 47344702 -155740830 + MIR SINE MIR 11 197 -65 180 97 0 0 chr5 47345847 47345878 -155739654 + (T)n Simple_repeat Simple_repeat 1 31 0 1957 143 0 0 chr5 47346618 47346905 -155738627 - AluSx SINE Alu -25 287 1 235 309 15 0 chr5 47347661 47347729 -155737803 + CT-rich Low_complexity Low_complexity 3 71 0 1520 226 48 99 chr5 47348022 47348565 -155736967 - MLT2B1 LTR ERVL 0 520 6 520 14 29 0 chr5 47350083 47350152 -155735380 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 8543 191 12 11 chr5 47351540 47354073 -155731459 + L1PA15 LINE L1 3627 6159 -6 724 152 61 18 chr5 47355855 47356020 -155729512 + MER96B DNA MER1_type? 8 179 -238 2512 127 163 76 chr5 47359173 47359738 -155725794 + LTR18B LTR ERVL 1 614 0 398 207 152 70 chr5 47359909 47360115 -155725417 + MIR SINE MIR 2 212 -50 398 365 30 77 chr5 47363527 47363891 -155721641 - L2 LINE L2 0 3272 2926 1537 205 5 80 chr5 47364138 47364538 -155720994 - MLT1A2 LTR MaLR -4 370 1 378 0 0 0 chr5 47364839 47364881 -155720651 + (TG)n Simple_repeat Simple_repeat 2 43 0 678 297 73 23 chr5 47365095 47365314 -155720218 + MIR SINE MIR 2 231 -31 214 242 10 30 chr5 47365335 47365434 -155720098 + A-rich Low_complexity Low_complexity 3 99 0 254 260 41 0 chr5 47365443 47365566 -155719966 + L1ME4a LINE L1 5994 6121 0 227 260 96 0 chr5 47365661 47365734 -155719798 + MIR SINE MIR 132 211 -51 652 349 74 10 chr5 47365774 47366178 -155719354 + LTR33 LTR ERVL 77 506 -15 216 150 50 0 chr5 47366384 47366424 -155719108 - MIR SINE MIR -9 253 212 742 233 0 0 chr5 47366425 47366575 -155718957 - MER21-int LTR ERV1 -3695 496 347 2928 226 64 29 chr5 47366576 47367324 -155718208 - MER21B LTR ERV1 -47 816 43 258 232 0 134 chr5 47367328 47367410 -155718122 - MER21B LTR ERV1 -775 88 18 181 294 337 0 chr5 47367540 47367632 -155717900 - MIR SINE MIR -123 139 17 638 273 167 0 chr5 47368226 47368424 -155717108 + MIR SINE MIR 2 232 -30 406 203 102 34 chr5 47368600 47368718 -155716814 - L2 LINE L2 -4 3309 3184 279 0 0 0 chr5 47368743 47368775 -155716757 + MLT2A1 LTR ERVL 29 60 -384 688 223 82 5 chr5 47368777 47368814 -155716718 - Ricksha DNA DNA -2863 383 333 22584 78 3 4 chr5 47368814 47373054 -155712478 - HERVL-A1 LTR ERVL 0 5654 1418 11187 70 7 0 chr5 47373190 47374611 -155710921 - HERVL-A1 LTR ERVL -4204 1450 20 2999 102 33 0 chr5 47374617 47375047 -155710485 - MLT2A1 LTR ERVL 0 444 1 241 226 24 60 chr5 47375154 47375238 -155710294 + MIR3 SINE MIR 125 205 -3 676 353 65 37 chr5 47375280 47375634 -155709898 - L2 LINE L2 0 3272 2909 539 336 8 51 chr5 47375671 47375906 -155709626 - MIR SINE MIR -30 232 8 324 335 119 53 chr5 47375900 47376165 -155709367 - L2 LINE L2 -394 2919 2673 * 337 307 193 0 chr5 47376165 47376228 -155709304 + MER5A DNA MER1_type 11 61 -128 1926 87 0 23 chr5 47376228 47376493 -155709039 + AluY SINE Alu 1 259 -52 337 307 193 0 chr5 47376493 47376579 -155708953 + MER5A DNA MER1_type 61 189 0 341 253 213 27 chr5 47376587 47376737 -155708795 + MER5B DNA MER1_type 1 178 0 324 335 119 53 chr5 47376737 47377236 -155708296 - L2 LINE L2 -646 2667 1934 1485 177 22 130 chr5 47377244 47377410 -155708122 - MLT1A1 LTR MaLR -2 363 265 2292 110 51 28 chr5 47377410 47377766 -155707766 + THE1B LTR MaLR 1 364 0 1485 177 22 130 chr5 47377766 47378006 -155707526 - MLT1A1 LTR MaLR -100 265 1 269 294 92 34 chr5 47378382 47378501 -155707031 - L2 LINE L2 -6 3266 3141 1533 167 67 4 chr5 47379228 47379497 -155706035 + AluJo SINE Alu 3 288 -24 1010 164 22 76 chr5 47380522 47380747 -155704785 - MER20 DNA MER1_type -1 218 6 282 56 0 0 chr5 47381394 47381430 -155704102 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr5 47384025 47384060 -155701472 + AT_rich Low_complexity Low_complexity 1 35 0 2459 255 55 5 chr5 47384740 47385497 -155700035 + Zaphod DNA AcHobo 66 860 -3171 313 171 14 0 chr5 47385508 47385578 -155699954 + Zaphod DNA AcHobo 3832 3902 -129 227 345 146 18 chr5 47387242 47387352 -155698180 + L2 LINE L2 3142 3265 -7 570 181 76 28 chr5 47387858 47388002 -155697530 + L1MC1 LINE L1 6183 6333 0 1046 154 26 5 chr5 47388057 47388252 -155697280 - L1PA16 LINE L1 -9 6157 5959 1429 212 10 49 chr5 47388252 47388638 -155696894 - L1P LINE L1 -829 5317 4947 3822 223 7 20 chr5 47388639 47389586 -155695946 + L1P LINE L1 4011 4945 -1201 278 315 47 20 chr5 47389630 47389779 -155695753 + L1MEd LINE L1 857 1009 -5363 518 293 151 23 chr5 47389902 47390493 -155695039 + L1MEd LINE L1 1071 1887 -4676 400 270 101 45 chr5 47390554 47390732 -155694800 - L2 LINE L2 -1362 1952 1765 1444 303 44 39 chr5 47390732 47391320 -155694212 - L2 LINE L2 -1691 1623 1033 706 287 96 51 chr5 47391327 47391755 -155693777 - LTR16B LTR ERVL 0 464 18 1279 155 48 0 chr5 47391802 47392037 -155693495 + AluSg/x SINE Alu 68 312 0 180 111 0 0 chr5 47392101 47392128 -155693404 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 392 322 0 26 chr5 47392601 47392716 -155692816 + MIR SINE MIR 26 137 -125 2095 230 29 23 chr5 47392786 47393491 -155692041 - LTR27 LTR ERV1 0 636 3 197 324 111 19 chr5 47394544 47394652 -155690880 - L2 LINE L2 -2882 432 315 2198 110 7 23 chr5 47395093 47395403 -155690129 - AluSx SINE Alu -7 305 1 375 272 128 31 chr5 47396176 47396371 -155689161 + MIR SINE MIR 22 235 -27 1996 183 31 5 chr5 47396407 47396789 -155688743 + L1MC1 LINE L1 5942 6333 0 22 0 0 0 chr5 47396793 47396815 -155688717 + AT_rich Low_complexity Low_complexity 1 22 0 279 224 52 0 chr5 47398056 47398114 -155687418 + L2 LINE L2 3175 3235 -37 2536 121 159 116 chr5 47398249 47398911 -155686621 - L1MA6 LINE L1 -23 6277 5588 * 5226 128 25 15 chr5 47398896 47399254 -155686278 - L1PB4 LINE L1 -3 6856 6503 345 100 0 0 chr5 47399254 47399304 -155686228 + (TG)n Simple_repeat Simple_repeat 2 51 0 5226 128 25 15 chr5 47399304 47399836 -155685696 - L1PB4 LINE L1 -356 6503 5957 1711 115 50 149 chr5 47399851 47400267 -155685265 + THE1C LTR MaLR 1 375 0 5662 238 31 76 chr5 47400267 47401450 -155684082 - L1PB4 LINE L1 -903 5946 4711 2119 162 78 16 chr5 47401450 47401833 -155683699 + MSTB LTR MaLR 1 407 -19 2414 173 14 5 chr5 47401840 47402262 -155683270 - MSTB LTR MaLR 0 426 1 5662 238 31 76 chr5 47402262 47403419 -155682113 - L1PB4 LINE L1 -2144 4705 3497 339 186 0 0 chr5 47403419 47403489 -155682043 + MER41A LTR ERV1 399 468 -86 5662 238 31 76 chr5 47403489 47406920 -155678612 - L1PB4 LINE L1 -3352 3497 433 2343 90 0 31 chr5 47406920 47407241 -155678291 + AluY SINE Alu 1 311 0 5662 238 31 76 chr5 47407241 47407656 -155677876 - L1PB4 LINE L1 -6416 433 1 929 173 0 6 chr5 47407659 47407827 -155677705 - L1M2 LINE L1 -684 5616 5450 2759 173 4 10 chr5 47407835 47408435 -155677097 + L1M1 LINE L1 4844 5442 -744 231 269 154 8 chr5 47408484 47408614 -155676918 + Charlie8 DNA MER1_type 24 172 -2245 30 45 0 0 chr5 47409066 47409110 -155676422 + AT_rich Low_complexity Low_complexity 1 44 0 34 55 0 0 chr5 47410276 47410331 -155675201 + AT_rich Low_complexity Low_complexity 1 55 0 1072 283 87 27 chr5 47410715 47411153 -155674379 + MLT2F LTR ERVL 200 663 0 431 280 106 34 chr5 47411155 47411419 -155674113 - L1MEc LINE L1 -4003 2393 2111 482 286 108 9 chr5 47411606 47411837 -155673695 - L1MEc LINE L1 -4260 2136 1883 308 275 100 42 chr5 47411859 47411979 -155673553 - L1MEc LINE L1 -4531 1684 1558 651 259 17 35 chr5 47411992 47412013 -155673519 - L1P LINE L1 -1507 4639 4619 5193 160 23 22 chr5 47412013 47413542 -155671990 - L1PA15 LINE L1 -3 7600 6069 * 6645 52 17 0 chr5 47413536 47414824 -155670708 - L1PA7 LINE L1 0 6154 4875 651 259 17 35 chr5 47413542 47415060 -155670472 - L1P LINE L1 -1527 4619 4410 1044 219 2 95 chr5 47415122 47415564 -155669968 - L1PA15 LINE L1 -1680 5904 5504 5292 251 44 24 chr5 47415568 47418426 -155667106 - L1PA15 LINE L1 -2918 4666 1667 8694 205 81 30 chr5 47418438 47418520 -155667012 - L1MCa LINE L1 -1793 4633 4557 414 57 0 0 chr5 47418520 47418573 -155666959 + (TG)n Simple_repeat Simple_repeat 1 53 0 8694 205 81 30 chr5 47418573 47421619 -155663913 - L1MCa LINE L1 -1869 4557 1207 2150 83 17 3 chr5 47421619 47421779 -155663753 - AluY SINE Alu -19 292 125 423 0 0 0 chr5 47421779 47421826 -155663706 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2150 83 17 3 chr5 47421826 47421953 -155663579 - AluY SINE Alu -186 125 1 8694 205 81 30 chr5 47421953 47422900 -155662632 - L1MCa LINE L1 -5219 1207 310 769 315 81 30 chr5 47422923 47423397 -155662135 - L1MEc LINE L1 -4873 1523 1010 2081 121 3 25 chr5 47423397 47423711 -155661821 - AluSp SINE Alu -6 307 1 769 315 81 30 chr5 47423711 47423845 -155661687 - L1MEc LINE L1 -5386 1010 884 7818 142 24 6 chr5 47423950 47424006 -155661526 - Tigger2 DNA MER2_type -1 2717 2663 4227 58 0 4 chr5 47424006 47424539 -155660993 + L1PA7 LINE L1 5617 6147 -7 7818 142 24 6 chr5 47424539 47425810 -155659722 - Tigger2 DNA MER2_type -55 2663 1366 1360 190 20 70 chr5 47425876 47426276 -155659256 - LTR56 LTR ERV1 -57 388 9 * 7720 137 23 30 chr5 47426270 47427159 -155658373 - Tigger2 DNA MER2_type -1336 1382 505 2721 29 0 3 chr5 47427159 47427467 -155658065 + AluY SINE Alu 1 307 -4 7720 137 23 30 chr5 47427467 47427969 -155657563 - Tigger2 DNA MER2_type -2213 505 1 252 0 0 0 chr5 47428263 47428291 -155657241 + (TG)n Simple_repeat Simple_repeat 1 28 0 183 129 0 0 chr5 47428291 47428322 -155657210 + (TGG)n Simple_repeat Simple_repeat 3 33 0 412 245 180 0 chr5 47429005 47429159 -155656373 - MIR SINE MIR -28 234 53 4144 206 24 5 chr5 47429310 47430244 -155655288 - L1MD2 LINE L1 -13 6346 5396 247 206 131 19 chr5 47430522 47430629 -155654903 - L1MC5 LINE L1 -37 7924 7806 198 0 0 0 chr5 47431628 47431650 -155653882 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 424 182 71 0 chr5 47431874 47431973 -155653559 + L2 LINE L2 3177 3282 -31 1832 231 78 83 chr5 47431977 47432748 -155652784 + LTR41 LTR ERVL 1 767 -6 223 245 0 0 chr5 47432967 47433016 -155652516 - L2 LINE L2 0 3313 3265 182 118 29 0 chr5 47433162 47433196 -155652336 + CT-rich Low_complexity Low_complexity 1 35 0 186 305 207 8 chr5 47433289 47433545 -155651987 - L3b LINE CR1 -171 1412 1106 2023 144 0 13 chr5 47433701 47434006 -155651526 - AluJb SINE Alu -7 305 5 2027 103 15 0 chr5 47434038 47434309 -155651223 - AluSp SINE Alu -18 295 21 367 209 0 44 chr5 47434645 47434736 -155650796 + HsTC2 DNA Tc2 7 93 -1805 195 42 0 0 chr5 47435212 47435236 -155650296 + (CCCCAA)n Simple_repeat Simple_repeat 6 29 0 3822 178 45 29 chr5 47435369 47436139 -155649393 + LTR39 LTR ERV1 1 783 0 181 245 75 0 chr5 47436664 47436717 -155648815 + MIR SINE MIR 139 195 -67 1619 203 14 0 chr5 47438027 47438308 -155647224 + AluJb SINE Alu 7 291 -21 3684 42 0 31 chr5 47439051 47439529 -155646003 + L1PA5 LINE L1 5692 6154 0 238 224 0 0 chr5 47442283 47442332 -155643200 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2566 66 0 0 chr5 47442827 47443129 -155642403 - AluSp SINE Alu -11 302 1 260 67 0 183 chr5 47444023 47444083 -155641449 + MADE1 DNA Mariner 32 80 0 356 279 96 15 chr5 47444304 47444440 -155641092 + L1MB2 LINE L1 5133 5279 -867 3709 158 42 6 chr5 47444448 47445155 -155640377 + L1MB2 LINE L1 5407 6139 -32 222 203 14 87 chr5 47445685 47445754 -155639778 - L2 LINE L2 -64 3249 3186 2427 65 0 0 chr5 47447356 47447647 -155637885 + AluY SINE Alu 1 291 -20 2355 125 17 3 chr5 47447855 47448214 -155637318 + THE1B LTR MaLR 1 364 0 2406 78 0 23 chr5 47449166 47449475 -155636057 + AluY SINE Alu 1 302 -9 484 259 88 0 chr5 47450169 47450316 -155635216 - L3 LINE CR1 -2 1575 1416 2094 108 0 24 chr5 47450536 47450832 -155634700 - AluSx SINE Alu -15 297 9 12425 33 11 0 chr5 47452067 47454331 -155631201 - L1PA5 LINE L1 -2 6152 3870 11693 36 16 1 chr5 47454331 47455877 -155629655 + L1PA5 LINE L1 2313 3881 -2265 279 283 0 0 chr5 47456058 47456118 -155629414 - L2 LINE L2 -2 3311 3252 426 356 118 35 chr5 47456163 47456964 -155628568 + L2 LINE L2 2154 3017 -255 230 299 299 30 chr5 47456995 47457259 -155628273 - L2 LINE L2 -13 3259 2925 216 0 0 0 chr5 47459720 47459744 -155625788 + (T)n Simple_repeat Simple_repeat 1 24 0 318 262 65 0 chr5 47459771 47459878 -155625654 - HAL1 LINE L1 -145 2362 2249 323 279 23 0 chr5 47461038 47461124 -155624408 + MIR SINE MIR 1 88 -174 281 290 149 0 chr5 47461731 47461838 -155623694 + MIR3 SINE MIR 9 131 -77 1512 182 23 19 chr5 47462055 47462319 -155623213 + AluJo SINE Alu 7 271 -41 182 33 67 0 chr5 47462327 47462357 -155623175 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 507 69 0 0 chr5 47462854 47462926 -155622606 + (CA)n Simple_repeat Simple_repeat 2 73 0 1014 129 0 0 chr5 47463991 47464146 -155621386 + L1MA1 LINE L1 6148 6302 0 21 0 0 0 chr5 47464146 47464167 -155621365 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 0 13 chr5 47465324 47465401 -155620131 + L1M4c LINE L1 1743 1818 -4566 203 339 152 12 chr5 47465978 47466143 -155619389 + MIR SINE MIR 33 220 -42 822 264 67 77 chr5 47466184 47466747 -155618785 - L2 LINE L2 -4 3309 2677 313 309 110 71 chr5 47466883 47467165 -155618367 + L2 LINE L2 2979 3271 -1 219 375 101 31 chr5 47467513 47468030 -155617502 - L2 LINE L2 -573 2741 2189 437 286 25 36 chr5 47468392 47468588 -155616944 - MLT1J LTR MaLR -298 213 20 219 209 15 15 chr5 47469394 47469461 -155616071 + A-rich Low_complexity Low_complexity 5 71 0 432 279 184 15 chr5 47470836 47471037 -155614495 + MIR SINE MIR 28 262 0 377 204 143 20 chr5 47471067 47471165 -155614367 + L2 LINE L2 3194 3303 -10 22 0 0 0 chr5 47472606 47472628 -155612904 + AT_rich Low_complexity Low_complexity 1 22 0 295 268 45 36 chr5 47473828 47473940 -155611592 + MIR SINE MIR 94 206 -56 814 284 96 21 chr5 47474746 47475108 -155610424 + MLT1J1 LTR MaLR 45 433 -13 205 258 32 137 chr5 47475231 47475355 -155610177 + L2 LINE L2 3161 3271 -1 194 347 27 0 chr5 47475909 47475984 -155609548 - L2 LINE L2 -8 3264 3188 466 85 12 12 chr5 47477270 47477352 -155608180 + (TA)n Simple_repeat Simple_repeat 1 82 0 272 328 136 20 chr5 47477383 47477685 -155607847 + L2 LINE L2 1954 2290 -1024 726 272 42 22 chr5 47477702 47478051 -155607481 + MLT1J2 LTR MaLR 1 393 -57 540 332 132 22 chr5 47478058 47478567 -155606965 + L2 LINE L2 2331 2895 -419 1322 205 38 27 chr5 47479041 47479334 -155606198 + AluJo SINE Alu 1 296 -16 1909 107 59 4 chr5 47479366 47479659 -155605873 - AluSx SINE Alu 0 308 1 322 171 0 53 chr5 47481458 47481534 -155603998 + MER116 DNA Mariner 8 79 -1 1558 162 0 84 chr5 47482892 47483200 -155602332 + AluJb SINE Alu 1 282 -30 977 184 82 10 chr5 47483895 47484102 -155601430 + L1MC4a LINE L1 6603 6824 -984 351 315 179 9 chr5 47484626 47484855 -155600677 + MIR SINE MIR 6 256 -6 401 275 8 15 chr5 47485468 47485599 -155599933 + L1ME LINE L1 1785 1914 -4482 181 240 60 20 chr5 47486013 47486063 -155599469 + L3 LINE CR1 1403 1454 -123 343 284 95 0 chr5 47487166 47487314 -155598218 + L1ME LINE L1 5607 5768 -422 929 293 80 61 chr5 47487349 47487923 -155597609 + L1MEc LINE L1 116 700 -5696 561 289 32 0 chr5 47487941 47488131 -155597401 + L1MEc LINE L1 1695 1890 -4506 654 259 18 6 chr5 47488786 47488956 -155596576 - MER5B DNA MER1_type -3 175 4 409 356 43 0 chr5 47489258 47489421 -155596111 + MIR3 SINE MIR 16 185 -23 656 266 101 21 chr5 47489423 47489660 -155595872 + MIR SINE MIR 7 262 0 2429 61 3 10 chr5 47489676 47489989 -155595543 + AluY SINE Alu 1 311 0 257 306 217 25 chr5 47492140 47492297 -155593235 + MIR SINE MIR 3 189 -73 458 212 0 106 chr5 47492303 47492435 -155593097 - L2 LINE L2 -4 3309 3192 1025 205 120 0 chr5 47492436 47492636 -155592896 + MER58A DNA MER1_type 1 224 0 2110 226 158 12 chr5 47492684 47493901 -155591631 - L1MEc LINE L1 -3169 3046 1695 534 300 0 25 chr5 47493919 47494119 -155591413 - L1MEc LINE L1 -5696 700 506 216 0 0 0 chr5 47494120 47494144 -155591388 + (T)n Simple_repeat Simple_repeat 1 24 0 506 181 124 112 chr5 47495250 47495509 -155590023 - L1MC5 LINE L1 -63 7898 7637 246 390 0 21 chr5 47495538 47495633 -155589899 - MIR SINE MIR -78 130 38 6092 88 20 15 chr5 47495749 47495960 -155589572 + L1PA11 LINE L1 5178 5387 -787 2021 144 3 0 chr5 47495960 47496252 -155589280 + AluSx SINE Alu 3 295 -17 6092 88 20 15 chr5 47496252 47497033 -155588499 + L1PA11 LINE L1 5387 6174 0 257 175 105 0 chr5 47497041 47497098 -155588434 + MIR SINE MIR 81 143 -65 210 336 56 65 chr5 47497115 47497222 -155588310 - L2 LINE L2 -5 3267 3162 2327 88 0 0 chr5 47497269 47497565 -155587967 + AluY SINE Alu 1 296 -15 389 306 87 20 chr5 47497676 47497872 -155587660 - L1 LINE L1 -1681 4465 4257 321 323 77 20 chr5 47498244 47498439 -155587093 - L1 LINE L1 -2689 3457 3252 236 324 35 12 chr5 47498518 47498688 -155586844 - L1 LINE L1 -3127 3019 2846 332 342 34 17 chr5 47498856 47498973 -155586559 + MIR3 SINE MIR 3 121 -87 922 201 72 0 chr5 47498977 47499171 -155586361 + MER3 DNA MER1_type 1 208 -1 2296 97 0 0 chr5 47501048 47501336 -155584196 - AluSg SINE Alu -22 288 1 1779 198 29 21 chr5 47502036 47502506 -155583026 - L1MD3 LINE L1 0 7995 7387 274 214 29 57 chr5 47502506 47502576 -155582956 - MLT1F1 LTR MaLR -457 110 43 2927 222 50 59 chr5 47502590 47503387 -155582145 + MER21B LTR ERV1 17 806 -57 424 171 117 0 chr5 47503418 47503529 -155582003 - L1MC3 LINE L1 -699 7086 6963 233 56 0 28 chr5 47503533 47503569 -155581963 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2017 114 0 0 chr5 47503571 47503844 -155581688 - AluY SINE Alu -24 287 15 749 155 39 0 chr5 47554357 47554486 -155531046 + AluSq/x SINE Alu 1 134 -179 21 36 0 0 chr5 47557680 47557708 -155527824 + AT_rich Low_complexity Low_complexity 1 28 0 2070 162 73 5 chr5 47558676 47559071 -155526461 + MSTB LTR MaLR 5 426 0 234 196 20 0 chr5 47559808 47559859 -155525673 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 509 252 181 24 chr5 47561224 47561522 -155524010 + L1ME4a LINE L1 5712 6056 -65 190 329 79 14 chr5 47561730 47561870 -155523662 + L2 LINE L2 2505 2653 -661 817 249 39 0 chr5 47563471 47563700 -155521832 + L1MA4 LINE L1 6059 6296 -4 216 399 86 17 chr5 47565213 47565446 -155520086 + L3 LINE CR1 255 503 -1074 215 256 103 0 chr5 47565776 47565854 -155519678 + L3 LINE CR1 596 681 -896 340 305 86 33 chr5 47566393 47566544 -155518988 + L3 LINE CR1 663 821 -756 2350 256 131 0 chr5 47566649 47567083 -155518449 + L1PA3 LINE L1 5664 6154 -1 24 0 0 0 chr5 47567427 47567451 -155518081 + AT_rich Low_complexity Low_complexity 1 24 0 782 191 0 0 chr5 47567543 47567674 -155517858 - FLAM_A SINE Alu -2 131 1 2140 166 98 5 chr5 47568749 47569176 -155516356 + LTR24 LTR ERV1 1 467 0 339 364 86 25 chr5 47569453 47569615 -155515917 + MIR3 SINE MIR 19 190 -18 2003 104 7 0 chr5 47570083 47570353 -155515179 - AluSx SINE Alu -30 282 11 426 290 150 17 chr5 47570835 47571197 -155514335 + L1ME LINE L1 5347 5758 -363 1812 193 81 3 chr5 47572158 47572769 -155512763 - L1MC/D LINE L1 -698 5926 5261 323 209 110 0 chr5 47573192 47573283 -155512249 - L1MC/D LINE L1 -4262 2164 2064 * 2399 196 22 10 chr5 47573275 47573770 -155511762 - L1MC/D LINE L1 -5905 521 21 261 333 105 7 chr5 47574167 47574320 -155511212 + MIR SINE MIR 15 182 -80 526 205 43 50 chr5 47575763 47575924 -155509608 + MSTB1 LTR MaLR 217 376 -56 685 313 112 24 chr5 47576750 47577242 -155508290 + L2 LINE L2 2171 2705 -609 185 282 51 77 chr5 47577443 47577560 -155507972 + MIR SINE MIR 106 219 -43 2010 84 7 54 chr5 47578162 47578484 -155507048 - AluSq SINE Alu 0 308 1 447 195 214 31 chr5 47578880 47579039 -155506493 - MER58C DNA MER1_type -1 214 27 940 271 58 45 chr5 47581285 47581661 -155503871 + L2 LINE L2 2895 3275 -38 226 296 0 12 chr5 47581830 47581911 -155503621 + L1MC5 LINE L1 7822 7901 -60 398 162 90 27 chr5 47582082 47582193 -155503339 + L1M1 LINE L1 16 133 -7432 8522 125 79 18 chr5 47582202 47582441 -155503091 + L1M1 LINE L1 1522 1745 -5820 279 0 0 0 chr5 47582441 47582472 -155503060 + (GA)n Simple_repeat Simple_repeat 2 32 0 8522 125 79 18 chr5 47582472 47583883 -155501649 + L1M1 LINE L1 1745 3273 -4292 1310 121 0 11 chr5 47583883 47584065 -155501467 + AluSx SINE Alu 1 180 -132 462 82 0 0 chr5 47584065 47584126 -155501406 + AluSp/q SINE Alu 235 295 -18 2314 151 38 32 chr5 47584129 47584948 -155500584 + L1M1 LINE L1 3265 4084 -3481 1643 173 82 20 chr5 47584958 47585410 -155500122 + L1M1 LINE L1 4409 4888 -2677 262 48 0 0 chr5 47585411 47585453 -155500079 + L1MA3 LINE L1 6264 6305 0 2099 132 6 40 chr5 47586602 47586950 -155498582 - MER1B DNA MER1_type -1 336 1 27 0 0 0 chr5 47587103 47587130 -155498402 + AT_rich Low_complexity Low_complexity 1 27 0 707 281 57 18 chr5 47587856 47588084 -155497448 + MIR SINE MIR 10 246 -16 640 198 128 11 chr5 47588594 47588723 -155496809 + MER3 DNA MER1_type 1 160 -49 1575 151 68 11 chr5 47588723 47589001 -155496531 - AluJb SINE Alu -13 299 6 640 198 128 11 chr5 47589001 47589058 -155496474 + MER3 DNA MER1_type 160 209 0 311 296 8 32 chr5 47589058 47589175 -155496357 + MER117 DNA MER1_type 43 158 -39 216 367 57 32 chr5 47592676 47592834 -155492698 - L2 LINE L2 -221 3051 2890 403 286 86 0 chr5 47593030 47593240 -155492292 - L1M4 LINE L1 -1537 4609 4382 1541 274 186 32 chr5 47593830 47595085 -155490447 + L2 LINE L2 1843 3295 -18 26 64 0 0 chr5 47595451 47595498 -155490034 + AT_rich Low_complexity Low_complexity 1 47 0 246 95 0 0 chr5 47595658 47595700 -155489832 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7056 15 9 0 chr5 47595700 47596557 -155488975 - L1PA3 LINE L1 -10 6145 5281 * 15741 32 1 11 chr5 47596554 47598641 -155486891 + L1PA3 LINE L1 3206 5273 -873 668 175 56 16 chr5 47600594 47600720 -155484812 + FLAM_C SINE Alu 1 131 -2 1159 168 177 37 chr5 47601438 47601766 -155483766 + MLT1A2 LTR MaLR 1 374 0 1806 122 54 44 chr5 47602371 47602666 -155482866 + AluSx SINE Alu 6 303 -9 196 321 0 0 chr5 47603242 47603295 -155482237 - MIR SINE MIR -58 150 98 22 70 0 0 chr5 47603760 47603803 -155481729 + AT_rich Low_complexity Low_complexity 1 43 0 2040 244 55 25 chr5 47604244 47604956 -155480576 + L1ME3A LINE L1 5428 6160 -10 258 304 76 0 chr5 47605144 47605223 -155480309 - L2 LINE L2 -1 3271 3187 1045 275 148 5 chr5 47606473 47606913 -155478619 + L2 LINE L2 2365 2867 -447 592 267 175 51 chr5 47606913 47607325 -155478207 + LTR33 LTR ERVL 13 475 -46 2058 193 10 8 chr5 47608433 47608826 -155476706 + MER44D DNA MER2_type 8 401 -304 1137 174 28 0 chr5 47608824 47609042 -155476490 + MER44D DNA MER2_type 457 552 -53 * 335 23 23 0 chr5 47609386 47609430 -155476102 + (TA)n Simple_repeat Simple_repeat 2 46 0 2056 104 4 0 chr5 47611460 47611730 -155473802 + AluSq SINE Alu 11 281 -32 213 154 0 0 chr5 47611921 47611960 -155473572 + (CA)n Simple_repeat Simple_repeat 2 40 0 1130 172 162 0 chr5 47612360 47612650 -155472882 + MER44D DNA MER2_type 2 608 -1 913 148 136 4 chr5 47612651 47612894 -155472638 - L1MA8 LINE L1 -68 6223 5949 213 397 43 0 chr5 47613139 47613280 -155472252 - L2 LINE L2 -1 3271 3125 301 228 0 13 chr5 47613903 47613982 -155471550 + HAL1 LINE L1 1065 1142 -1365 1048 96 45 0 chr5 47614450 47614627 -155470905 - L1MA1 LINE L1 -102 6200 6016 268 247 83 107 chr5 47615011 47615198 -155470334 + MIR SINE MIR 23 200 -62 22 56 0 0 chr5 47615318 47615354 -155470178 + AT_rich Low_complexity Low_complexity 1 36 0 480 91 0 0 chr5 47616471 47616548 -155468984 - L1PB1 LINE L1 0 6151 6075 198 234 69 122 chr5 47616664 47616852 -155468680 - L2 LINE L2 -38 3275 3098 190 315 136 47 chr5 47616902 47617159 -155468373 - L2 LINE L2 -803 2511 2232 857 173 49 0 chr5 47617357 47617519 -155468013 + MER5A DNA MER1_type 20 189 0 224 328 70 39 chr5 47617630 47617758 -155467774 - L2 LINE L2 -2 3270 3139 2544 4 0 0 chr5 47617848 47618120 -155467412 + AluYa5 SINE Alu 23 294 -17 422 266 149 0 chr5 47620536 47620690 -155464842 + MIR SINE MIR 86 262 0 186 128 0 0 chr5 47621901 47621940 -155463592 + (T)n Simple_repeat Simple_repeat 1 39 0 1955 140 29 18 chr5 47621993 47622104 -155463428 + MER7A DNA MER2_type 2 110 -2928 1551 134 48 70 chr5 47622104 47622417 -155463115 + AluJb SINE Alu 1 306 -6 1955 140 29 18 chr5 47622417 47622648 -155462884 + MER7A DNA MER2_type 110 346 0 243 218 99 40 chr5 47623317 47623418 -155462114 + L2 LINE L2 2682 2788 -526 311 326 12 0 chr5 47623551 47623637 -155461895 + MIR SINE MIR 6 92 -170 713 160 8 0 chr5 47623756 47623875 -155461657 - MLT1A1 LTR MaLR 0 374 255 1038 198 114 51 chr5 47623880 47624307 -155461225 + MER57A LTR ERV1 1 403 0 1032 195 82 35 chr5 47624307 47624538 -155460994 - MLT1A1 LTR MaLR -123 242 1 2057 121 23 0 chr5 47625118 47625423 -155460109 + AluSx SINE Alu 1 312 0 323 306 156 0 chr5 47626165 47626338 -155459194 + L2 LINE L2 2870 3069 -203 184 257 68 54 chr5 47626413 47626487 -155459045 + L2 LINE L2 3228 3302 -11 2600 150 44 11 chr5 47627396 47627870 -155457662 + L1MB1 LINE L1 5676 6165 -3 843 171 0 42 chr5 47628400 47628693 -155456839 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 47628975 47628997 -155456535 + AT_rich Low_complexity Low_complexity 1 22 0 330 276 17 9 chr5 47629307 47629423 -155456109 + L1MC/D LINE L1 5607 5723 -2085 349 338 43 81 chr5 47629544 47629890 -155455642 - L2 LINE L2 -45 3227 2895 1824 120 67 20 chr5 47630057 47630378 -155455154 - MER4B LTR ERV1 -284 495 1 2270 129 22 14 chr5 47630378 47630749 -155454783 - LTR39-int LTR ERV1 0 6758 6385 6585 123 14 37 chr5 47630851 47631960 -155453572 - LTR39-int LTR ERV1 -421 6337 5254 378 82 0 0 chr5 47631960 47632009 -155453523 + L1PA13 LINE L1 5899 5947 -227 3987 141 19 20 chr5 47632025 47632715 -155452817 - MER50 LTR ERV1 -39 695 7 1543 78 37 0 chr5 47632715 47632932 -155452600 + L1PA13 LINE L1 5938 6162 -1 1670 160 19 4 chr5 47632937 47633206 -155452326 + AluSx SINE Alu 16 288 -24 713 129 0 9 chr5 47633224 47633340 -155452192 - LTR39-int LTR ERV1 -1495 5263 5149 * 17585 143 52 35 chr5 47633332 47637623 -155447909 - LTR39-int LTR ERV1 -2050 4708 238 975 160 17 17 chr5 47637666 47637847 -155447685 - LTR39-int LTR ERV1 -6473 285 105 929 221 28 14 chr5 47638300 47638513 -155447019 - MER58A DNA MER1_type 0 224 9 505 228 81 15 chr5 47638617 47638753 -155446779 + L1M4b LINE L1 24 168 -6691 3919 179 44 12 chr5 47638761 47639491 -155446041 - LTR39 LTR ERV1 -30 753 1 5140 139 30 32 chr5 47639511 47639836 -155445696 + MER4D LTR ERV1 1 325 -578 2004 128 50 0 chr5 47639836 47640133 -155445399 - AluSx SINE Alu 0 312 1 5140 139 30 32 chr5 47640133 47640712 -155444820 + MER4D LTR ERV1 325 903 0 2462 223 89 42 chr5 47640721 47641465 -155444067 + L1M4b LINE L1 823 1623 -5232 1703 188 3 7 chr5 47641465 47641774 -155443758 + AluJo SINE Alu 1 308 -4 2462 223 89 42 chr5 47641774 47642071 -155443461 + L1M4b LINE L1 1623 1904 -4951 1995 150 7 3 chr5 47642071 47642378 -155443154 + AluSx SINE Alu 1 308 -4 254 49 0 49 chr5 47642388 47642429 -155443103 + (GGGAA)n Simple_repeat Simple_repeat 1 39 0 1238 275 26 28 chr5 47642432 47642934 -155442598 + L1M4b LINE L1 1849 2349 -4610 3348 189 9 19 chr5 47642937 47643659 -155441873 + L1MB7 LINE L1 5219 5932 -252 323 182 0 0 chr5 47643659 47643714 -155441818 - MER3 DNA MER1_type -154 55 1 535 272 0 7 chr5 47643899 47644035 -155441497 - MLT1D LTR MaLR 0 505 371 586 189 19 0 chr5 47644916 47645022 -155440510 + MLT1D LTR MaLR 28 135 -370 273 328 109 0 chr5 47645204 47645323 -155440209 - L2 LINE L2 0 3313 3182 1512 217 7 0 chr5 47646179 47646479 -155439053 - AluJo SINE Alu -6 306 5 408 310 94 35 chr5 47646849 47647188 -155438344 + L2 LINE L2 2507 2865 -449 576 123 19 0 chr5 47647477 47647583 -155437949 - L1MB8 LINE L1 0 6178 6071 35 0 0 0 chr5 47647583 47647618 -155437914 + AT_rich Low_complexity Low_complexity 1 35 0 3534 195 39 15 chr5 47647640 47648073 -155437459 - L1MB7 LINE L1 -106 6078 5657 1673 166 58 47 chr5 47648073 47648434 -155437098 - MLT1A1 LTR MaLR 0 365 1 3534 195 39 15 chr5 47648434 47648976 -155436556 - L1MB7 LINE L1 -527 5657 5083 507 195 0 68 chr5 47649011 47649129 -155436403 + MLT1C LTR MaLR 353 462 -5 785 225 107 37 chr5 47649200 47649507 -155436025 - MLT1D LTR MaLR -134 333 1 24 32 0 0 chr5 47649592 47649623 -155435909 + AT_rich Low_complexity Low_complexity 1 31 0 1532 182 42 3 chr5 47649720 47650006 -155435526 + AluJb SINE Alu 6 302 -10 592 305 95 6 chr5 47650044 47650382 -155435150 - L1ME4a LINE L1 -234 5887 5520 2815 10 0 3 chr5 47650411 47650720 -155434812 - AluYa5 SINE Alu -3 308 1 1914 158 0 16 chr5 47651218 47651535 -155433997 - AluSx SINE Alu 0 312 1 213 246 197 16 chr5 47652345 47652406 -155433126 - L2 LINE L2 -33 3239 3168 189 0 0 0 chr5 47654491 47654512 -155431020 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1083 160 11 0 chr5 47654546 47654727 -155430805 - AluJb SINE Alu -129 183 1 471 313 16 26 chr5 47658107 47658323 -155427209 - MIR3 SINE MIR -21 241 30 25 31 0 0 chr5 47659786 47659818 -155425714 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5 47659958 47659982 -155425550 + AT_rich Low_complexity Low_complexity 1 24 0 202 286 27 15 chr5 47660419 47660530 -155425002 + MIR SINE MIR 34 212 -50 23 78 0 0 chr5 47660568 47660619 -155424913 + AT_rich Low_complexity Low_complexity 1 51 0 1911 135 55 30 chr5 47661606 47661969 -155423563 - THE1C LTR MaLR -3 372 1 687 291 62 34 chr5 47662251 47662543 -155422989 - MLT1J LTR MaLR -211 300 1 290 310 46 11 chr5 47662629 47662716 -155422816 - MIR SINE MIR -105 157 68 604 128 0 0 chr5 47663527 47663660 -155421872 + AluSg/x SINE Alu 194 326 0 1307 153 48 71 chr5 47663674 47663942 -155421590 + AluJo SINE Alu 37 298 -14 486 76 1 40 chr5 47664495 47664591 -155420941 + L1MA4A LINE L1 5970 6072 -231 2220 128 14 8 chr5 47664633 47664986 -155420546 - THE1A LTR MaLR 0 355 1 319 276 0 0 chr5 47665357 47665433 -155420099 - MIR SINE MIR -56 152 77 22 0 0 0 chr5 47665503 47665525 -155420007 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 47667054 47667097 -155418435 + AT_rich Low_complexity Low_complexity 1 43 0 247 369 14 27 chr5 47668158 47668380 -155417152 + L2 LINE L2 2149 2367 -947 226 220 40 0 chr5 47669077 47669127 -155416405 + L2 LINE L2 3219 3270 -2 631 265 107 47 chr5 47669576 47669829 -155415703 - L2 LINE L2 -4 3309 3042 22 0 0 0 chr5 47670595 47670617 -155414915 + AT_rich Low_complexity Low_complexity 1 22 0 724 258 79 25 chr5 47670916 47671156 -155414376 + MIR SINE MIR 7 259 -3 284 291 166 7 chr5 47671635 47671752 -155413780 + L1MC4a LINE L1 5779 5876 -1932 204 40 0 0 chr5 47671752 47671777 -155413755 + (TG)n Simple_repeat Simple_repeat 2 26 0 284 291 166 7 chr5 47671777 47671948 -155413584 + L1MC4a LINE L1 5876 6113 -1695 294 260 41 0 chr5 47672373 47672446 -155413086 + L1MC4a LINE L1 6704 6779 -1029 778 186 0 14 chr5 47672724 47672869 -155412663 + FLAM_C SINE Alu 1 143 0 616 241 121 39 chr5 47672920 47673351 -155412181 + L1MC5 LINE L1 7452 7917 -44 365 320 122 52 chr5 47674195 47674735 -155410797 - L1M2 LINE L1 -5396 1453 876 2482 60 0 0 chr5 47675453 47675752 -155409780 + AluY SINE Alu 1 299 -12 185 261 62 15 chr5 47675868 47675933 -155409599 + L3b LINE CR1 1173 1240 -343 194 333 235 8 chr5 47676465 47676597 -155408935 + MIR3 SINE MIR 38 199 -9 413 304 71 10 chr5 47676857 47677050 -155408482 - MIR SINE MIR -4 258 51 26 50 0 0 chr5 47677130 47677170 -155408362 + AT_rich Low_complexity Low_complexity 1 40 0 2582 55 0 0 chr5 47677487 47677795 -155407737 - AluY SINE Alu -3 308 1 987 143 67 48 chr5 47678330 47678539 -155406993 - MER20 DNA MER1_type -2 217 5 237 315 65 19 chr5 47679701 47679809 -155405723 - L2 LINE L2 -218 3054 2942 2334 60 43 7 chr5 47679817 47680116 -155405416 - AluY SINE Alu 0 311 2 459 316 103 83 chr5 47680238 47680693 -155404839 - L2 LINE L2 -559 2755 2292 437 270 104 0 chr5 47680695 47680810 -155404722 + L2 LINE L2 3187 3313 0 194 182 23 45 chr5 47680841 47680885 -155404647 - L2 LINE L2 -1045 2269 2227 450 339 40 91 chr5 47680919 47681521 -155404011 - L2 LINE L2 -2657 657 87 251 385 45 0 chr5 47681806 47681962 -155403570 - L2 LINE L2 -614 2700 2538 324 326 38 0 chr5 47682136 47682268 -155403264 - MIR SINE MIR -16 246 110 1807 152 18 11 chr5 47682393 47682676 -155402856 - AluJb SINE Alu -24 288 4 346 258 42 84 chr5 47683609 47683789 -155401743 - MER5A DNA MER1_type -1 188 4 21 57 0 0 chr5 47684084 47684119 -155401413 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 47684379 47684402 -155401130 + AT_rich Low_complexity Low_complexity 1 23 0 705 266 13 0 chr5 47684404 47684558 -155400974 + L1MCc LINE L1 348 503 -5920 1832 266 73 65 chr5 47684635 47685448 -155400084 + L1MCc LINE L1 654 1459 -5482 1585 154 4 4 chr5 47685448 47685694 -155399838 + AluJb SINE Alu 37 282 -30 1832 266 73 65 chr5 47685694 47685994 -155399538 + L1MCc LINE L1 1459 1755 -5186 796 194 109 47 chr5 47685994 47686205 -155399327 - MER58A DNA MER1_type 0 224 1 1832 266 73 65 chr5 47686205 47686622 -155398910 + L1MCc LINE L1 1755 2201 -4740 255 143 24 0 chr5 47686633 47686675 -155398857 - MSTD LTR MaLR 0 396 354 938 223 98 65 chr5 47686810 47687147 -155398385 - MSTD LTR MaLR -48 348 1 509 276 18 0 chr5 47687147 47687310 -155398222 + L1MCc LINE L1 2395 2560 -4562 602 280 68 16 chr5 47687316 47687684 -155397848 + L1MCc LINE L1 2600 2986 -4136 1849 236 92 27 chr5 47687687 47688271 -155397261 - MLT1E3 LTR MaLR -2 622 1 277 226 48 12 chr5 47688271 47688355 -155397177 + L1MCc LINE L1 2983 3069 -4053 2123 144 0 3 chr5 47688999 47689312 -155396220 - AluJb SINE Alu 0 312 1 2104 121 7 3 chr5 47689427 47689724 -155395808 - AluSx SINE Alu -14 298 1 416 244 61 9 chr5 47692147 47692262 -155393270 - MIR SINE MIR -32 230 110 372 348 30 30 chr5 47692468 47692632 -155392900 + MIR SINE MIR 10 173 -89 1904 158 62 27 chr5 47692906 47693279 -155392253 + MLT1B LTR MaLR 1 386 -4 231 384 54 0 chr5 47693474 47693586 -155391946 + L2 LINE L2 2670 2787 -527 350 329 19 6 chr5 47694143 47694304 -155391228 + L1ME LINE L1 5558 5720 -401 337 310 17 17 chr5 47694384 47694500 -155391032 + L2 LINE L2 3196 3311 -2 6907 51 41 1 chr5 47694578 47695441 -155390091 + MER11D LTR ERVK 1 897 0 690 237 73 0 chr5 47697127 47697304 -155388228 + MER3 DNA MER1_type 3 192 -17 2398 74 3 0 chr5 47697308 47697605 -155387927 - AluY SINE Alu -13 298 1 443 255 87 19 chr5 47697809 47698017 -155387515 - L1MEc LINE L1 -4519 1877 1656 12119 62 3 2 chr5 47698018 47700397 -155385135 + L1PA7 LINE L1 3774 6154 0 250 260 15 87 chr5 47701438 47701634 -155383898 - L1M4 LINE L1 -2636 3510 3329 848 184 12 86 chr5 47701663 47701908 -155383624 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 47701929 47702092 -155383440 - L1MEc LINE L1 -5099 1106 931 2091 48 11 4 chr5 47702170 47702443 -155383089 - L1PA4 LINE L1 -2 6153 5879 2706 54 0 0 chr5 47702443 47702775 -155382757 + L1PA4 LINE L1 5560 5891 -263 354 326 54 14 chr5 47703511 47703658 -155381874 - MIR3 SINE MIR -16 192 40 234 67 44 0 chr5 47705542 47705587 -155379945 - LTR66 LTR ERVL -170 440 394 243 141 14 28 chr5 47705587 47705658 -155379874 + (TA)n Simple_repeat Simple_repeat 2 71 0 941 175 0 65 chr5 47705679 47705879 -155379653 + MLT1B LTR MaLR 1 187 -203 411 21 0 0 chr5 47708020 47708068 -155377464 + (TG)n Simple_repeat Simple_repeat 2 49 0 1509 180 10 13 chr5 47708417 47708722 -155376810 - L1MB3 LINE L1 -17 6166 5863 2162 170 21 45 chr5 47708750 47708874 -155376658 - L1MB3 LINE L1 -247 5936 5811 2053 121 0 33 chr5 47708874 47709179 -155376353 + AluSg SINE Alu 4 298 -12 2162 170 21 45 chr5 47709179 47709525 -155376007 - L1MB3 LINE L1 -372 5811 5477 1626 62 5 0 chr5 47709532 47709741 -155375791 - L1PA7 LINE L1 -1 6153 5944 1174 224 64 46 chr5 47709803 47710192 -155375340 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 47710984 47711013 -155374519 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 313 15 0 chr5 47711382 47711449 -155374083 + MIR SINE MIR 2 69 -193 1574 155 102 0 chr5 47711684 47711948 -155373584 + AluJb SINE Alu 1 291 -21 304 313 174 25 chr5 47713143 47713344 -155372188 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 47713596 47713639 -155371893 + AT_rich Low_complexity Low_complexity 1 43 0 1152 265 77 33 chr5 47713693 47713930 -155371602 + MER97c DNA MER1_type? 1 263 -827 183 42 0 0 chr5 47713930 47713954 -155371578 + (TG)n Simple_repeat Simple_repeat 1 24 0 1152 265 77 33 chr5 47713954 47714105 -155371427 + MER97c DNA MER1_type? 263 406 -684 557 311 66 55 chr5 47714900 47715247 -155370285 + MLT1L LTR MaLR 203 553 -62 1870 119 3 25 chr5 47715477 47715762 -155369770 - AluSx SINE Alu -32 280 2 2406 82 3 0 chr5 47715970 47716274 -155369258 - AluSc SINE Alu 0 309 5 212 284 171 11 chr5 47716474 47716562 -155368970 + L2 LINE L2 3170 3271 -1 197 336 112 8 chr5 47716636 47716770 -155368762 - L2 LINE L2 -507 2807 2660 7007 61 3 0 chr5 47716879 47718464 -155367068 + L1PA7 LINE L1 4566 6154 0 250 260 15 87 chr5 47719505 47719701 -155365831 - L1MCc LINE L1 -2636 4305 4124 848 184 12 86 chr5 47719730 47719975 -155365557 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 47719996 47720159 -155365373 - L1ME LINE L1 -5099 1832 1657 7661 28 0 0 chr5 47720237 47721164 -155364368 - L1PA3 LINE L1 -2 6153 5227 3076 257 82 29 chr5 47722569 47723698 -155361834 + L1MEc LINE L1 22 1209 -5187 973 286 57 25 chr5 47723700 47723940 -155361592 - L1MCc LINE L1 -4681 2441 2210 2169 132 3 0 chr5 47723940 47724251 -155361281 - AluSx SINE Alu 0 312 1 973 286 57 25 chr5 47724251 47724605 -155360927 - L1MCc LINE L1 -4912 2210 1828 273 139 46 37 chr5 47724624 47724732 -155360800 + (TTATA)n Simple_repeat Simple_repeat 3 111 0 833 293 64 14 chr5 47724770 47725185 -155360347 - L1MCc LINE L1 -4933 1490 1172 7303 171 30 11 chr5 47725209 47725371 -155360161 - L1MA8 LINE L1 -5 7307 7149 2467 61 3 0 chr5 47725371 47725667 -155359865 - AluY SINE Alu -9 302 6 7303 171 30 11 chr5 47725667 47727921 -155357611 - L1MA8 LINE L1 -163 7149 4843 995 262 40 45 chr5 47727915 47728652 -155356880 - L1MA8 LINE L1 -4784 2314 1561 * 321 374 12 18 chr5 47729229 47729392 -155356140 - L1MA8 LINE L1 -5967 1131 970 227 336 20 34 chr5 47729438 47729587 -155355945 - L1MCc LINE L1 -5279 1144 998 247 308 9 28 chr5 47729793 47729900 -155355632 - L1MCc LINE L1 -5347 1076 972 701 295 70 38 chr5 47729968 47730368 -155355164 - L1MCc LINE L1 -5987 436 24 202 141 28 42 chr5 47730415 47730486 -155355046 + (TA)n Simple_repeat Simple_repeat 2 71 0 2258 154 65 22 chr5 47730668 47731084 -155354448 - Tigger2a DNA MER2_type 0 434 1 680 129 0 0 chr5 47731110 47731211 -155354321 - HY3 scRNA scRNA 0 101 1 7576 35 0 0 chr5 47731878 47732803 -155352729 - L1PA4 LINE L1 -744 5402 4478 6001 43 28 0 chr5 47732803 47733552 -155351980 + L1PA4 LINE L1 5382 6154 -1 401 186 70 0 chr5 47736669 47736755 -155348777 - MSTD LTR MaLR 0 396 305 328 295 63 14 chr5 47736757 47736926 -155348606 - L1ME3A LINE L1 -318 5852 5676 462 272 52 0 chr5 47737488 47737624 -155347908 - L1ME3A LINE L1 -519 5643 5501 445 270 63 140 chr5 47737649 47738364 -155347168 + L1MC4 LINE L1 7098 7757 -285 375 23 0 0 chr5 47738449 47738493 -155347039 + (TG)n Simple_repeat Simple_repeat 2 45 0 491 187 23 14 chr5 47739178 47740651 -155344881 + L1P4 LINE L1 3985 5558 -608 1463 196 0 15 chr5 47740651 47740911 -155344621 + AluJb SINE Alu 14 269 -43 491 187 23 14 chr5 47740911 47740994 -155344538 + L1P4 LINE L1 5558 5639 -527 1587 246 58 51 chr5 47741124 47742247 -155343285 - L1MCc LINE L1 -4564 2377 1145 586 270 167 15 chr5 47742258 47742588 -155342944 - L1MCc LINE L1 -5930 493 114 227 311 47 28 chr5 47742760 47742866 -155342666 - MIR SINE MIR -94 168 61 488 141 0 0 chr5 47742913 47742998 -155342534 - L1MB2 LINE L1 -9 6162 6078 2676 164 5 5 chr5 47743038 47743464 -155342068 - MSTB LTR MaLR 0 426 1 8076 167 35 71 chr5 47743469 47744903 -155340629 - MSTB-int LTR MaLR -5 1646 205 577 117 0 0 chr5 47744903 47744980 -155340552 - AluS SINE Alu -234 79 3 8076 167 35 71 chr5 47744980 47745178 -155340354 - MSTB-int LTR MaLR -1446 205 1 2228 199 5 21 chr5 47745178 47745611 -155339921 - MSTB LTR MaLR 0 426 1 265 255 34 40 chr5 47745652 47745801 -155339731 - L1ME4a LINE L1 -32 6089 5942 249 373 108 7 chr5 47745852 47746131 -155339401 - L3 LINE CR1 -568 1009 703 973 255 5 0 chr5 47746710 47746914 -155338618 + MER63A DNA MER1_type 6 210 0 386 296 109 19 chr5 47748046 47748367 -155337165 - L1ME4a LINE L1 0 6121 5772 451 250 72 62 chr5 47748381 47748589 -155336943 + MER46C DNA MER2_type 1 210 -128 23 54 0 0 chr5 47748620 47748657 -155336875 + AT_rich Low_complexity Low_complexity 1 37 0 373 309 170 22 chr5 47748681 47748904 -155336628 - L1ME4a LINE L1 -365 5756 5501 23 0 0 0 chr5 47748910 47748933 -155336599 + AT_rich Low_complexity Low_complexity 1 23 0 212 171 0 0 chr5 47748949 47748990 -155336542 + T-rich Low_complexity Low_complexity 1 41 0 5932 70 37 6 chr5 47749000 47749815 -155335717 - L1PA5 LINE L1 -8 6146 5307 31 0 0 0 chr5 47749824 47749855 -155335677 + AT_rich Low_complexity Low_complexity 1 31 0 3764 78 0 2 chr5 47749961 47750463 -155335069 - L1PA7 LINE L1 0 6154 5654 28 29 0 0 chr5 47751090 47751125 -155334407 + AT_rich Low_complexity Low_complexity 1 35 0 1017 98 0 14 chr5 47751911 47752054 -155333478 - AluSg1 SINE Alu -168 141 1 275 339 50 41 chr5 47752241 47752459 -155333073 + L2 LINE L2 2550 2769 -545 306 325 111 0 chr5 47752863 47752989 -155332543 + MIR SINE MIR 31 170 -92 289 160 0 0 chr5 47754954 47755004 -155330528 - MADE1 DNA Mariner -30 50 1 5838 162 19 24 chr5 47755004 47756088 -155329444 - L1MCa LINE L1 -5328 1098 21 310 333 91 6 chr5 47756157 47756322 -155329210 + L1 LINE L1 2629 2807 -3339 27 29 0 0 chr5 47756639 47756673 -155328859 + AT_rich Low_complexity Low_complexity 1 34 0 301 320 140 81 chr5 47757530 47757802 -155327730 - L2 LINE L2 0 3272 2985 340 338 128 46 chr5 47758305 47759040 -155326492 + L2 LINE L2 675 1481 -1833 2262 72 3 0 chr5 47759040 47759331 -155326201 + AluSp SINE Alu 1 292 -21 340 338 128 46 chr5 47759331 47759393 -155326139 + L2 LINE L2 1481 1537 -1777 397 240 146 0 chr5 47760370 47760466 -155325066 - L2 LINE L2 -4 3309 3200 1314 170 32 3 chr5 47760540 47760823 -155324709 - L1MA9 LINE L1 0 6312 6022 2859 98 15 75 chr5 47760824 47761294 -155324238 - MLT2A1 LTR ERVL -2 442 1 35709 78 9 3 chr5 47761294 47765915 -155319617 - HERVL-A1 LTR ERVL 0 5654 1005 2014 84 14 3 chr5 47765915 47766264 -155319268 - HERVL-A1 LTR ERVL -4950 704 261 2164 62 11 0 chr5 47766314 47766589 -155318943 - HERVL-A1 LTR ERVL -5375 279 2 364 48 34 3 chr5 47766590 47766649 -155318883 - MLT2A1 LTR ERVL 0 444 390 209 132 26 0 chr5 47766649 47766687 -155318845 + (TA)n Simple_repeat Simple_repeat 2 40 0 238 241 23 0 chr5 47766700 47766787 -155318745 - L1MC4 LINE L1 -1340 6702 6614 2786 105 15 5 chr5 47766799 47767199 -155318333 - MLT2A1 LTR ERVL -40 404 1 2129 142 5 36 chr5 47767203 47767591 -155317941 - L1MA9 LINE L1 -296 6016 5641 305 86 0 69 chr5 47767591 47767642 -155317890 + L1PA16 LINE L1 6113 6166 0 4317 184 35 52 chr5 47767642 47768457 -155317075 - L1MA9 LINE L1 -798 5348 4521 276 30 0 0 chr5 47768457 47768490 -155317042 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 1878 144 0 7 chr5 47768490 47768774 -155316758 - AluSx SINE Alu -30 282 1 4317 184 35 52 chr5 47768774 47768948 -155316584 - L1MA9 LINE L1 -1624 4522 4377 1694 138 28 38 chr5 47768948 47769237 -155316295 - AluSx SINE Alu -26 286 1 4317 184 35 52 chr5 47769237 47769410 -155316122 - L1MA9 LINE L1 -1769 4377 4203 262 319 17 17 chr5 47769477 47769593 -155315939 + MIR SINE MIR 141 256 -6 223 96 27 55 chr5 47769903 47769976 -155315556 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 188 200 18 91 chr5 47770009 47770064 -155315468 + L2 LINE L2 3263 3313 0 206 326 43 35 chr5 47770315 47770456 -155315076 - MIR SINE MIR -61 201 60 233 386 114 19 chr5 47770487 47770697 -155314835 - MLT1K LTR MaLR -356 232 3 189 0 0 0 chr5 47770749 47770770 -155314762 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2042 46 11 0 chr5 47770775 47771035 -155314497 - L1PA5 LINE L1 -13 6141 5879 2706 54 0 0 chr5 47771035 47771367 -155314165 + L1PA5 LINE L1 5560 5891 -263 354 326 54 14 chr5 47772104 47772251 -155313281 - MIR3 SINE MIR -16 192 40 238 109 0 0 chr5 47774129 47774175 -155311357 - LTR66 LTR ERVL -170 440 395 * 243 141 14 28 chr5 47774174 47774245 -155311287 + (TA)n Simple_repeat Simple_repeat 2 71 0 949 175 0 65 chr5 47774266 47774466 -155311066 + MLT1B LTR MaLR 1 187 -203 429 20 0 0 chr5 47776607 47776657 -155308875 + (TG)n Simple_repeat Simple_repeat 2 51 0 1519 180 10 13 chr5 47777006 47777311 -155308221 - L1MB3 LINE L1 -17 6166 5863 2193 170 21 45 chr5 47777339 47777463 -155308069 - L1MB3 LINE L1 -247 5936 5811 2021 121 0 33 chr5 47777463 47777768 -155307764 + AluSg SINE Alu 4 298 -12 2193 170 21 45 chr5 47777768 47778114 -155307418 - L1MB3 LINE L1 -372 5811 5477 1614 62 5 0 chr5 47778121 47778330 -155307202 - L1PA7 LINE L1 -1 6153 5944 1151 224 64 46 chr5 47778392 47778781 -155306751 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 47779567 47779596 -155305936 + (TG)n Simple_repeat Simple_repeat 2 30 0 239 313 15 0 chr5 47779965 47780032 -155305500 + MIR SINE MIR 2 69 -193 1545 155 102 0 chr5 47780267 47780531 -155305001 + AluJb SINE Alu 1 291 -21 302 313 174 25 chr5 47781726 47781927 -155303605 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 47782179 47782222 -155303310 + AT_rich Low_complexity Low_complexity 1 43 0 1187 268 77 31 chr5 47782276 47782513 -155303019 + MER97a DNA MER1_type? 1 264 -630 183 42 0 0 chr5 47782513 47782537 -155302995 + (TG)n Simple_repeat Simple_repeat 1 24 0 1187 268 77 31 chr5 47782537 47782687 -155302845 + MER97a DNA MER1_type? 264 406 -488 578 311 66 55 chr5 47783483 47783830 -155301702 + MLT1L LTR MaLR 203 553 -62 417 247 141 55 chr5 47783805 47784096 -155301436 - Charlie7 DNA MER1_type -188 2424 2109 * 207 0 0 0 chr5 47784639 47784662 -155300870 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 3069 153 22 13 chr5 47784678 47785233 -155300299 - L1PA16 LINE L1 0 6166 5607 207 198 41 41 chr5 47785327 47785448 -155300084 + (TATAA)n Simple_repeat Simple_repeat 3 123 0 388 320 201 8 chr5 47785538 47785782 -155299750 + L1M4 LINE L1 3628 3918 -2228 506 213 57 0 chr5 47786230 47786352 -155299180 + MER3 DNA MER1_type 41 122 -87 1104 181 122 0 chr5 47786361 47786648 -155298884 + MER3 DNA MER1_type 2264 2585 0 2105 119 3 28 chr5 47786648 47786968 -155298564 + AluSx SINE Alu 1 312 0 345 302 82 33 chr5 47787705 47787887 -155297645 - MLT1J LTR MaLR 0 511 321 308 214 34 34 chr5 47787950 47788039 -155297493 - MLT1J LTR MaLR -325 186 98 1363 335 118 25 chr5 47788087 47788850 -155296682 - L2 LINE L2 -218 3054 2220 17810 159 25 17 chr5 47791655 47797154 -155288378 - L1MA2 LINE L1 0 7723 2270 7835 32 0 1 chr5 47797154 47798861 -155286671 + L1PA4 LINE L1 4447 6152 -3 17810 159 25 17 chr5 47798861 47799299 -155286233 - L1MA2 LINE L1 -5453 2270 1837 387 0 0 0 chr5 47799299 47799342 -155286190 + (TG)n Simple_repeat Simple_repeat 2 44 0 17810 159 25 17 chr5 47799342 47800619 -155284913 - L1MA2 LINE L1 -5886 1837 459 7842 123 37 4 chr5 47800621 47802666 -155282866 - L1PA8 LINE L1 -6 6166 4051 2819 203 54 4 chr5 47802666 47803371 -155282161 - Charlie1 DNA MER1_type -715 2046 1 249 203 72 0 chr5 47803653 47803722 -155281810 + MER58B DNA MER1_type 127 326 -15 3482 161 20 2 chr5 47804657 47805249 -155280283 + LTR26 LTR ERV1 1 603 0 2247 160 28 14 chr5 47805714 47806151 -155279381 - L1MA3 LINE L1 -3 6302 5860 483 300 59 5 chr5 47806577 47806795 -155278737 + L2 LINE L2 2782 3009 -304 1583 208 185 55 chr5 47806859 47807389 -155278143 + MLT1E1 LTR MaLR 56 654 0 588 291 35 28 chr5 47807393 47807647 -155277885 + L2 LINE L2 3058 3313 0 33 43 0 0 chr5 47808854 47808901 -155276631 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr5 47809239 47809263 -155276269 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 47809535 47809571 -155275961 + AT_rich Low_complexity Low_complexity 1 36 0 396 237 42 89 chr5 47809659 47809849 -155275683 - MER112 DNA MER1_type -25 235 55 421 320 103 0 chr5 47809951 47810154 -155275378 + MIR SINE MIR 10 233 -29 8535 241 61 10 chr5 47810559 47813271 -155272261 + L1M4 LINE L1 2402 5253 -893 192 152 0 0 chr5 47814068 47814101 -155271431 + GA-rich Low_complexity Low_complexity 4 36 0 836 255 51 56 chr5 47814260 47814987 -155270545 - L2 LINE L2 0 3313 2040 1416 258 63 7 chr5 47815153 47815598 -155269934 + L1PA12 LINE L1 1 470 -7111 * 5250 135 28 27 chr5 47815594 47816162 -155269370 + L1PA15 LINE L1 5200 5770 -395 1370 207 70 0 chr5 47816162 47816433 -155269099 + AluJb SINE Alu 3 292 -20 5250 135 28 27 chr5 47816433 47816829 -155268703 + L1PA15 LINE L1 5770 6164 -1 2693 154 56 33 chr5 47816993 47817474 -155268058 - Ricksha DNA DNA -1547 499 8 419 274 121 56 chr5 47820466 47820814 -155264718 - L2 LINE L2 0 3313 2853 3440 226 94 16 chr5 47820994 47821803 -155263729 + Charlie2a DNA MER1_type 1570 2505 -357 189 74 0 0 chr5 47821803 47821830 -155263702 + (TG)n Simple_repeat Simple_repeat 2 28 0 3440 226 94 16 chr5 47821830 47822218 -155263314 + Charlie2a DNA MER1_type 2505 2861 -1 26 0 0 0 chr5 47822907 47822933 -155262599 + AT_rich Low_complexity Low_complexity 1 26 0 871 112 16 0 chr5 47823559 47823684 -155261848 - AluSg/x SINE Alu -19 293 167 663 263 78 4 chr5 47823725 47823968 -155261564 - L1ME3 LINE L1 -42 6120 5860 1883 152 9 9 chr5 47824076 47824392 -155261140 - L1MB1 LINE L1 -162 6006 5691 750 152 38 0 chr5 47824394 47824526 -155261006 + L1MB1 LINE L1 6023 6159 -9 663 282 52 20 chr5 47824711 47824963 -155260569 + MLT1I LTR MaLR 147 406 -3 30 59 0 0 chr5 47825259 47825310 -155260222 + AT_rich Low_complexity Low_complexity 1 51 0 2112 91 21 3 chr5 47825448 47825733 -155259799 - AluSg SINE Alu -20 290 1 187 171 0 0 chr5 47826905 47826940 -155258592 - MIR SINE MIR -55 207 173 2843 215 54 39 chr5 47827133 47827947 -155257585 + LTR1B LTR ERV1 1 826 0 2143 130 12 6 chr5 47827997 47828343 -155257189 + L1PA14 LINE L1 5810 6157 -4 21 0 0 0 chr5 47829076 47829097 -155256435 + AT_rich Low_complexity Low_complexity 1 21 0 3074 179 89 32 chr5 47829258 47829402 -155256130 + L1MB1 LINE L1 4464 4598 -1570 2162 128 0 0 chr5 47829402 47829698 -155255834 + AluSg SINE Alu 1 296 -14 3074 179 89 32 chr5 47829698 47830938 -155254594 + L1MB1 LINE L1 4598 5933 -235 379 286 62 29 chr5 47830974 47831215 -155254317 - L1ME4a LINE L1 -155 5966 5718 471 233 27 48 chr5 47831253 47831399 -155254133 - MIR SINE MIR -7 255 113 241 288 0 15 chr5 47831715 47831781 -155253751 + MIR SINE MIR 194 258 -4 342 338 34 14 chr5 47831840 47831988 -155253544 - L1ME4a LINE L1 -1101 5045 4895 2632 164 72 8 chr5 47832063 47832550 -155252982 + MER44D DNA MER2_type 2 574 -31 420 20 0 0 chr5 47832561 47832610 -155252922 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr5 47832705 47832733 -155252799 + AT_rich Low_complexity Low_complexity 1 28 0 1312 137 13 4 chr5 47832733 47832960 -155252572 - L1MA5A LINE L1 -5 6292 6064 30 59 0 0 chr5 47833865 47833916 -155251616 + AT_rich Low_complexity Low_complexity 1 51 0 11619 177 44 15 chr5 47834290 47836413 -155249119 - L1MA3 LINE L1 0 6305 4025 902 15 23 30 chr5 47836413 47836546 -155248986 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 11619 177 44 15 chr5 47836546 47838032 -155247500 - L1MA3 LINE L1 -2280 4025 2584 819 322 202 28 chr5 47838033 47838826 -155246706 - L2 LINE L2 -495 2819 1889 183 42 0 0 chr5 47839155 47839179 -155246353 + (TG)n Simple_repeat Simple_repeat 2 25 0 235 272 194 19 chr5 47839202 47839305 -155246227 - MER5B DNA MER1_type -6 172 52 2737 257 71 42 chr5 47840078 47840955 -155244577 + L1MB8 LINE L1 12 913 -5946 1865 177 36 8 chr5 47840980 47841342 -155244190 - MLT1B LTR MaLR -18 372 1 544 244 29 101 chr5 47841858 47842096 -155243436 + L1MB8 LINE L1 1205 1425 -5434 * 3129 249 94 17 chr5 47842089 47843392 -155242140 + L1MB8 LINE L1 3326 4728 -2229 1189 129 5 10 chr5 47843395 47843596 -155241936 - MER6 DNA MER2_type 0 865 666 4068 237 16 27 chr5 47843596 47844567 -155240965 + L1PA12 LINE L1 1 961 -6620 * 5384 148 30 29 chr5 47844566 47845568 -155239964 + L1P LINE L1 3319 4321 -1825 42161 38 22 1 chr5 47845574 47851588 -155233944 + L1PA3 LINE L1 13 6154 -1 1266 166 0 36 chr5 47851590 47851843 -155233689 + L1P LINE L1 4303 4546 -1600 * 4028 204 21 13 chr5 47851842 47852922 -155232610 + L1MB8 LINE L1 5897 6986 -3 186 279 103 29 chr5 47854946 47855014 -155230518 - MIR SINE MIR -110 98 26 307 264 40 56 chr5 47855960 47856085 -155229447 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 47856091 47856120 -155229412 + AT_rich Low_complexity Low_complexity 1 29 0 1813 120 3 14 chr5 47856125 47856408 -155229124 + AluSx SINE Alu 33 312 0 302 275 85 47 chr5 47856410 47856668 -155228864 + L1MC5 LINE L1 7650 7917 -44 1992 116 10 7 chr5 47856682 47856812 -155228720 + AluSg SINE Alu 1 129 -181 249 57 0 0 chr5 47856812 47856847 -155228685 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1992 116 10 7 chr5 47856847 47857008 -155228524 + AluSg SINE Alu 129 293 -17 264 114 0 0 chr5 47857401 47857436 -155228096 + MER92B LTR ERV1 1 35 -601 1412 146 0 24 chr5 47858727 47858940 -155226592 - AluJo SINE Alu -104 208 1 286 226 0 0 chr5 47859347 47859409 -155226123 + MER92C LTR ERV1 491 552 -2 431 238 173 28 chr5 47861316 47861530 -155224002 - MIR SINE MIR 0 262 18 1963 193 3 11 chr5 47862258 47862626 -155222906 - MLT1A1 LTR MaLR 0 365 1 221 311 40 27 chr5 47862803 47862877 -155222655 + L2 LINE L2 3198 3272 0 13616 193 30 18 chr5 47863098 47865870 -155219662 - L1M1 LINE L1 -486 6050 3255 1886 156 0 47 chr5 47865870 47866191 -155219341 - AluSx SINE Alu -6 306 1 13616 193 30 18 chr5 47866191 47867266 -155218266 - L1M1 LINE L1 -3281 3255 2195 10717 241 58 30 chr5 47867267 47867873 -155217659 - L1P4 LINE L1 -531 7054 6467 4061 98 6 44 chr5 47867873 47868503 -155217029 + LTR14B LTR ERVK 3 608 0 10717 241 58 30 chr5 47868503 47868948 -155216584 - L1P4 LINE L1 -1118 6467 6036 2409 136 8 0 chr5 47868948 47869316 -155216216 + THE1C LTR MaLR 1 371 -4 9327 119 40 45 chr5 47869320 47870909 -155214623 + THE1C-int LTR MaLR 1 1580 0 1860 137 99 9 chr5 47870909 47871253 -155214279 + THE1C LTR MaLR 1 375 0 10717 241 58 30 chr5 47871253 47873326 -155212206 - L1P4 LINE L1 -1551 6034 4021 2158 120 0 13 chr5 47873326 47873627 -155211905 - AluSg SINE Alu -13 297 1 10717 241 58 30 chr5 47873627 47875101 -155210431 - L1P4 LINE L1 -3564 4021 1898 484 311 82 41 chr5 47875668 47875983 -155209549 - L1M1 LINE L1 -5614 689 362 429 298 152 21 chr5 47876021 47876403 -155209129 - L1MEd LINE L1 -5666 453 22 38 85 0 0 chr5 47876543 47876637 -155208895 + AT_rich Low_complexity Low_complexity 1 94 0 203 363 55 0 chr5 47876691 47876782 -155208750 + L2 LINE L2 3175 3270 -2 3807 204 31 45 chr5 47877061 47877228 -155208304 + MST-int LTR MaLR 45 213 -1438 3224 102 29 20 chr5 47877228 47877716 -155207816 + LTR22B LTR ERVK 1 492 0 3807 204 31 45 chr5 47877716 47878507 -155207025 + MST-int LTR MaLR 213 990 -661 286 211 0 0 chr5 47878514 47878571 -155206961 + MSTB1 LTR MaLR 327 383 -49 330 336 111 61 chr5 47878853 47879195 -155206337 + L2 LINE L2 2912 3270 -2 7929 111 11 19 chr5 47879240 47882198 -155203334 + HERV9 LTR ERV1 1 2468 0 * 15861 76 4 8 chr5 47882198 47884393 -155201139 + HERV9 LTR ERV1 2758 4944 -3455 783 162 46 46 chr5 47884394 47884696 -155200836 + HERV9 LTR ERV1 840 1141 -5755 278 226 0 0 chr5 47884694 47884756 -155200776 + HERV9 LTR ERV1 7503 7564 -835 * 4266 93 2 2 chr5 47884752 47885362 -155200170 + HERV9 LTR ERV1 7789 8398 -1 2811 82 181 145 chr5 47885363 47886030 -155199502 + LTR12 LTR ERV1 1 691 -23 26 74 0 0 chr5 47887312 47887366 -155198166 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 47889409 47889431 -155196101 + AT_rich Low_complexity Low_complexity 1 22 0 624 213 51 41 chr5 47889659 47889856 -155195676 - LTR16A1 LTR ERVL -11 446 248 1244 329 87 30 chr5 47890488 47891748 -155193784 - HERVL LTR ERVL -699 4955 3624 399 296 52 34 chr5 47891797 47892030 -155193502 - HERVL LTR ERVL -2430 2566 2330 1360 144 34 58 chr5 47892044 47892540 -155192992 - MSTA LTR MaLR 0 428 1 346 342 0 0 chr5 47892540 47892657 -155192875 - HERVL LTR ERVL -3513 2251 2135 1752 132 149 14 chr5 47892684 47893048 -155192484 - MSTA LTR MaLR -15 413 1 250 356 30 0 chr5 47893075 47893207 -155192325 - HERVL LTR ERVL -2996 2000 1865 720 336 54 44 chr5 47893236 47893918 -155191614 - HERVL LTR ERVL -4207 789 101 2314 92 10 79 chr5 47893967 47894358 -155191174 + THE1B LTR MaLR 1 364 0 1365 263 38 8 chr5 47894430 47894826 -155190706 - LTR16A1 LTR ERVL -6 451 44 310 291 31 13 chr5 47894997 47895171 -155190361 + MLT1I LTR MaLR 244 409 0 372 312 64 9 chr5 47895211 47895320 -155190212 - MIR SINE MIR -57 151 37 451 317 32 0 chr5 47895419 47895542 -155189990 - L2 LINE L2 0 3313 3187 238 381 24 0 chr5 47896111 47896195 -155189337 - L2 LINE L2 -53 3219 3134 260 219 14 14 chr5 47896332 47896405 -155189127 + HsTC2 DNA Tc2 13 85 -1813 274 153 83 28 chr5 47896510 47896582 -155188950 + HsTC2 DNA Tc2 1808 1883 -15 405 0 0 0 chr5 47897201 47897246 -155188286 + (TG)n Simple_repeat Simple_repeat 2 46 0 226 158 79 13 chr5 47898191 47898267 -155187265 - Charlie5 DNA MER1_type -119 2493 2413 22 0 0 0 chr5 47898268 47898290 -155187242 + AT_rich Low_complexity Low_complexity 1 22 0 1521 207 42 8 chr5 47898353 47898591 -155186941 + L1M3 LINE L1 4989 5217 -951 2099 106 0 3 chr5 47898591 47898874 -155186658 + AluSg SINE Alu 29 310 0 1521 207 42 8 chr5 47898874 47899242 -155186290 + L1M3 LINE L1 5217 5606 -562 641 220 58 95 chr5 47899259 47899554 -155185978 + L1M1 LINE L1 681 964 -6245 1452 200 129 0 chr5 47899555 47899920 -155185612 - MSTB1 LTR MaLR -20 412 1 9185 206 31 17 chr5 47899943 47901540 -155183992 + L1M1 LINE L1 1189 2831 -4377 288 0 0 0 chr5 47901540 47901572 -155183960 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 9185 206 31 17 chr5 47901572 47902597 -155182935 + L1M1 LINE L1 2831 3841 -3367 356 83 0 0 chr5 47902599 47902647 -155182885 - L1PA16 LINE L1 -221 5945 5898 1258 111 10 30 chr5 47902647 47902844 -155182688 + L1PA16 LINE L1 5973 6166 0 11228 181 22 17 chr5 47903095 47904535 -155180997 + L1M1 LINE L1 3823 5290 -2075 2413 74 0 0 chr5 47904535 47904832 -155180700 - AluY SINE Alu -13 298 2 11228 181 22 17 chr5 47904832 47906195 -155179337 + L1M1 LINE L1 5290 6645 -720 1351 153 52 64 chr5 47906222 47906548 -155178984 - LTR1 LTR ERV1 -463 322 1 2408 68 10 0 chr5 47908282 47908590 -155176942 + AluY SINE Alu 1 311 0 1937 118 7 7 chr5 47908893 47909188 -155176344 + AluSp SINE Alu 27 313 0 25 0 0 0 chr5 47909532 47909557 -155175975 + AT_rich Low_complexity Low_complexity 1 25 0 2426 55 0 3 chr5 47909998 47910288 -155175244 + AluY SINE Alu 6 294 -17 4520 208 36 7 chr5 47910711 47911987 -155173545 + L1MC2 LINE L1 5023 6331 -13 25 0 0 0 chr5 47911987 47912012 -155173520 + AT_rich Low_complexity Low_complexity 1 25 0 372 328 23 8 chr5 47912089 47912220 -155173312 + MIR3 SINE MIR 12 144 -64 1953 126 3 14 chr5 47912334 47912652 -155172880 - AluSx SINE Alu 0 315 1 29 0 0 0 chr5 47913424 47913453 -155172079 + AT_rich Low_complexity Low_complexity 1 29 0 1406 218 100 52 chr5 47913495 47913977 -155171555 - MLT1D LTR MaLR 0 505 1 241 241 52 78 chr5 47915112 47915263 -155170269 - MER5A DNA MER1_type -10 179 26 1984 142 7 10 chr5 47915866 47916176 -155169356 + AluSg SINE Alu 1 309 -1 1778 160 144 8 chr5 47916323 47916698 -155168834 + MSTA LTR MaLR 3 428 0 8791 149 11 35 chr5 47916700 47918311 -155167221 + MSTA-int LTR MaLR 3 1574 -6 1723 151 133 18 chr5 47918321 47918637 -155166895 + MSTA LTR MaLR 1 370 -58 6208 89 0 0 chr5 47918637 47919712 -155165820 - L1PA10 LINE L1 0 6168 5094 1723 151 133 18 chr5 47919712 47919779 -155165753 + MSTA LTR MaLR 370 428 0 195 280 20 0 chr5 47919919 47919969 -155165563 - MER5A DNA MER1_type -135 54 4 24 0 0 0 chr5 47920041 47920065 -155165467 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr5 47921863 47921900 -155163632 + AT_rich Low_complexity Low_complexity 1 37 0 293 278 41 0 chr5 47921933 47922030 -155163502 + L1ME LINE L1 5650 5750 -371 35 0 0 0 chr5 47922166 47922201 -155163331 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 27 40 chr5 47922338 47922638 -155162894 + AluJb SINE Alu 1 296 -16 1038 179 80 19 chr5 47922638 47922951 -155162581 - L1M4 LINE L1 -841 5305 4974 565 229 0 47 chr5 47922949 47923141 -155162391 - L1MC4 LINE L1 -410 7632 7450 * 553 266 115 49 chr5 47923168 47923473 -155162059 - L1MC4a LINE L1 -1208 6600 6276 196 100 140 20 chr5 47923509 47923609 -155161923 + (TTTAA)n Simple_repeat Simple_repeat 5 116 0 1401 247 32 66 chr5 47923758 47924316 -155161216 - L1MC4a LINE L1 -1756 6052 5514 2006 137 0 0 chr5 47924398 47924707 -155160825 - AluSx SINE Alu 0 313 5 479 296 84 64 chr5 47927204 47927657 -155157875 + L2 LINE L2 2326 2787 -527 349 382 85 20 chr5 47927798 47927997 -155157535 + L2 LINE L2 2989 3200 -72 1558 246 87 54 chr5 47928097 47928169 -155157363 - L1ME2 LINE L1 -13 6220 6152 1615 174 7 7 chr5 47928169 47928451 -155157081 + AluJo SINE Alu 1 282 -30 1558 246 87 54 chr5 47928451 47928467 -155157065 - L1ME2 LINE L1 -81 6152 6138 472 88 12 12 chr5 47928467 47928547 -155156985 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 1558 246 87 54 chr5 47928547 47929064 -155156468 - L1ME2 LINE L1 -95 6138 5640 270 0 0 0 chr5 47929064 47929094 -155156438 + (ATG)n Simple_repeat Simple_repeat 2 31 0 2185 95 0 11 chr5 47929099 47929384 -155156148 - AluSc SINE Alu -27 282 1 1558 246 87 54 chr5 47929384 47929808 -155155724 - L1ME2 LINE L1 -596 5637 5228 2164 110 0 31 chr5 47929808 47930125 -155155407 - AluSq SINE Alu -6 307 1 1558 246 87 54 chr5 47930125 47930638 -155154894 - L1ME2 LINE L1 -1005 5228 4508 1829 156 3 6 chr5 47930643 47930963 -155154569 - L1MA4A LINE L1 -5 6298 5980 2721 177 74 30 chr5 47930989 47933320 -155152212 - L1MA4A LINE L1 -467 5836 3247 404 336 27 7 chr5 47933321 47933467 -155152065 + MLT2F LTR ERVL 288 436 -227 1384 258 66 12 chr5 47933470 47933967 -155151565 - L1ME2 LINE L1 -3159 3056 2533 225 94 0 0 chr5 47933967 47933999 -155151533 + (T)n Simple_repeat Simple_repeat 1 32 0 6474 14 1 0 chr5 47933999 47934737 -155150795 - L1HS LINE L1 0 6155 5417 8755 17 0 0 chr5 47934738 47935801 -155149731 + L1P1 LINE L1 4370 5432 -723 1026 247 48 8 chr5 47935794 47936324 -155149208 - L1ME2 LINE L1 -3670 2545 1996 * 201 349 12 12 chr5 47937155 47937241 -155148291 + L2 LINE L2 3220 3305 -8 738 307 99 19 chr5 47938338 47938700 -155146832 + L2 LINE L2 2923 3313 0 197 301 43 32 chr5 47939805 47939898 -155145634 + MIR3 SINE MIR 106 199 -9 25 31 0 0 chr5 47940135 47940167 -155145365 + AT_rich Low_complexity Low_complexity 1 32 0 7490 33 0 1 chr5 47940231 47941131 -155144401 - L1PA4 LINE L1 -3 6152 5254 1818 36 0 0 chr5 47941136 47941361 -155144171 + L1P LINE L1 4996 5220 -926 221 167 19 0 chr5 47941855 47941909 -155143623 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 184 344 103 56 chr5 47942021 47942448 -155143084 + L2 LINE L2 2825 3271 -1 314 300 133 0 chr5 47943007 47943127 -155142405 + MIR3 SINE MIR 15 150 -58 1094 166 6 6 chr5 47943201 47943382 -155142150 - MSTC LTR MaLR -2 426 246 1761 144 45 51 chr5 47944225 47944271 -155141261 - THE1C LTR MaLR 0 375 330 1894 130 7 24 chr5 47944271 47944563 -155140969 + AluSx SINE Alu 7 293 -19 1761 144 45 51 chr5 47944563 47944890 -155140642 - THE1C LTR MaLR -45 330 4 9090 123 84 8 chr5 47944893 47946362 -155139170 - THE1C-int LTR MaLR 0 1580 1 2364 131 11 8 chr5 47946362 47946736 -155138796 - THE1C LTR MaLR 0 375 1 2356 87 3 0 chr5 47947323 47947633 -155137899 - AluY SINE Alu 0 311 1 3453 73 7 0 chr5 47948054 47948507 -155137025 + L1PA8 LINE L1 5708 6163 -9 5266 156 38 26 chr5 47948639 47948712 -155136820 + L1MC2 LINE L1 5289 5360 -984 592 76 0 0 chr5 47948712 47948791 -155136741 + MADE1 DNA Mariner 2 80 0 5266 156 38 26 chr5 47948791 47949759 -155135773 + L1MC2 LINE L1 5360 6343 -1 22 0 0 0 chr5 47950085 47950107 -155135425 + AT_rich Low_complexity Low_complexity 1 22 0 337 314 99 52 chr5 47950217 47950580 -155134952 - L1M4 LINE L1 -3006 3140 2761 2206 159 12 56 chr5 47950624 47951038 -155134494 + L1M1 LINE L1 10 405 -7160 206 340 0 0 chr5 47951204 47951307 -155134225 + T-rich Low_complexity Low_complexity 1 103 0 561 304 124 0 chr5 47952055 47952272 -155133260 - MIR SINE MIR -12 250 7 494 320 11 56 chr5 47952853 47953031 -155132501 - MIR3 SINE MIR -7 201 32 654 294 65 17 chr5 47953938 47954169 -155131363 + MIR SINE MIR 8 249 -13 826 281 53 4 chr5 47954856 47955084 -155130448 + MIR SINE MIR 3 241 -21 1611 243 49 20 chr5 47956210 47956659 -155128873 + MLT1C LTR MaLR 6 467 0 284 136 11 171 chr5 47957102 47957140 -155128392 + MIR SINE MIR 164 182 -80 2034 136 7 0 chr5 47957140 47957434 -155128098 + AluSx SINE Alu 1 296 -16 284 136 11 171 chr5 47957434 47957483 -155128049 + MIR SINE MIR 182 237 -25 1675 188 0 0 chr5 47958777 47959090 -155126442 + AluJb SINE Alu 1 313 0 535 230 0 18 chr5 47959643 47959756 -155125776 + LTR33 LTR ERVL 402 512 -9 1846 156 146 13 chr5 47960158 47960536 -155124996 - MSTA LTR MaLR 0 428 1 505 317 45 15 chr5 47960960 47961162 -155124370 - MIR SINE MIR -50 212 5 29 28 0 0 chr5 47961424 47961460 -155124072 + AT_rich Low_complexity Low_complexity 1 36 0 1642 135 17 10 chr5 47962145 47962441 -155123091 + AluY SINE Alu 1 298 -13 418 257 35 47 chr5 47962822 47962993 -155122539 - MIR SINE MIR 0 262 94 2183 142 94 8 chr5 47965197 47965591 -155119941 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr5 47965997 47966027 -155119505 + AT_rich Low_complexity Low_complexity 1 30 0 287 336 84 8 chr5 47966274 47966405 -155119127 + MIR3 SINE MIR 41 181 -27 1422 203 65 4 chr5 47966405 47966681 -155118851 - AluJb SINE Alu -9 293 1 539 231 145 32 chr5 47966849 47967070 -155118462 + L1ME3A LINE L1 5711 5956 -214 401 239 8 0 chr5 47967126 47967243 -155118289 + (TA)n Simple_repeat Simple_repeat 2 119 0 200 432 20 7 chr5 47968603 47968751 -155116781 + MIR3 SINE MIR 40 189 -19 21 36 0 0 chr5 47968776 47968804 -155116728 + AT_rich Low_complexity Low_complexity 1 28 0 341 325 85 48 chr5 47968948 47969302 -155116230 - MLT1J2 LTR MaLR -2 448 82 22 0 0 0 chr5 47969887 47969909 -155115623 + AT_rich Low_complexity Low_complexity 1 22 0 793 231 35 15 chr5 47969949 47969984 -155115548 - MLT2B3 LTR ERVL 0 554 521 473 71 14 0 chr5 47969984 47970054 -155115478 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 793 231 35 15 chr5 47970054 47970217 -155115315 - MLT2B3 LTR ERVL -33 521 352 216 0 0 0 chr5 47970827 47970851 -155114681 + (TTC)n Simple_repeat Simple_repeat 1 24 0 342 0 0 0 chr5 47970851 47970889 -155114643 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1879 86 4 0 chr5 47970890 47971145 -155114387 - L1PA6 LINE L1 -17 6137 5882 1468 224 70 6 chr5 47971446 47971789 -155113743 + MLT1A1 LTR MaLR 1 365 0 403 342 117 48 chr5 47972201 47972891 -155112641 + L1MEc LINE L1 45 782 -5614 842 244 103 55 chr5 47972909 47973455 -155112077 + L1MEc LINE L1 1914 2485 -3911 3629 260 88 38 chr5 47973459 47975356 -155110176 + L1MEc LINE L1 2547 4538 -1677 207 0 0 0 chr5 47975361 47975384 -155110148 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 6749 136 18 13 chr5 47975399 47976996 -155108536 - L1MA1 LINE L1 0 7721 6116 5424 34 3 11 chr5 47977018 47977675 -155107857 - L1PA4 LINE L1 -49 6106 5455 * 5718 32 1 0 chr5 47977669 47978365 -155107167 + L1P LINE L1 4707 5403 -743 11820 174 19 8 chr5 47978388 47979696 -155105836 - L1MA1 LINE L1 -1447 6118 4825 1863 101 45 0 chr5 47979696 47979982 -155105550 - L1PA13 LINE L1 -5 6158 5860 11820 174 19 8 chr5 47979982 47982404 -155103128 - L1MA1 LINE L1 -2740 4825 2348 319 264 40 56 chr5 47985545 47985670 -155099862 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 47985676 47985705 -155099827 + AT_rich Low_complexity Low_complexity 1 29 0 1783 120 3 14 chr5 47985710 47985993 -155099539 + AluSx SINE Alu 33 312 0 325 275 85 47 chr5 47985995 47986253 -155099279 + L1MC5 LINE L1 7650 7917 -44 910 92 0 15 chr5 47986267 47986398 -155099134 + AluSg SINE Alu 1 129 -181 1393 146 0 24 chr5 47987467 47987680 -155097852 - AluJo SINE Alu -104 208 1 289 226 0 0 chr5 47988086 47988148 -155097384 + MER92C LTR ERV1 491 552 -2 322 211 187 16 chr5 47990055 47990178 -155095354 - MIR SINE MIR 0 262 119 278 156 73 110 chr5 48090333 48090442 -154995090 + MER104 DNA Tc2 37 141 -39 5426 67 5 158 chr5 48090442 48091563 -154993969 + SVA Other Other 10 959 -427 2560 92 19 36 chr5 48091564 48092031 -154993501 + SVA Other Other 6 464 -922 2998 176 82 8 chr5 48092136 48092754 -154992778 + L1MB3 LINE L1 5506 6169 -14 1861 183 0 31 chr5 48094107 48094160 -154991372 + MER1B DNA MER1_type 2 55 -2657 2285 86 122 0 chr5 48094160 48094496 -154991036 + MER51B LTR ERV1 1 377 0 1861 183 0 31 chr5 48094496 48094791 -154990741 + MER1B DNA MER1_type 55 339 0 412 67 0 100 chr5 48094946 48095036 -154990496 + AluJ/FRAM SINE Alu 232 312 0 1088 145 0 11 chr5 48095333 48095519 -154990013 + AluSg SINE Alu 127 310 0 224 284 27 14 chr5 48096513 48096587 -154988945 + MIR SINE MIR 47 121 -141 22 0 0 0 chr5 48097604 48097626 -154987906 + AT_rich Low_complexity Low_complexity 1 22 0 376 293 70 35 chr5 48098805 48099146 -154986386 - L1M4 LINE L1 -2091 4055 3703 1110 108 0 0 chr5 48100403 48100551 -154984981 + AluSg SINE Alu 8 155 -155 375 23 0 0 chr5 48100956 48101000 -154984532 + (TC)n Simple_repeat Simple_repeat 1 44 0 1151 98 4 1 chr5 48101001 48101247 -154984285 - AluSc SINE Alu -31 278 2 21 0 0 0 chr5 48101959 48101980 -154983552 + AT_rich Low_complexity Low_complexity 1 21 0 1980 114 26 3 chr5 48102618 48102924 -154982608 + AluSp SINE Alu 1 313 0 1196 229 28 0 chr5 48103236 48103489 -154982043 - MER31-int LTR ERV1 -808 4128 3869 698 202 0 0 chr5 48103636 48103755 -154981777 - AluJb SINE Alu -192 120 2 1772 151 16 7 chr5 48103828 48104133 -154981399 - AluSx SINE Alu -4 308 1 192 319 79 49 chr5 48104190 48104456 -154981076 + L2 LINE L2 3035 3308 -5 1618 189 13 0 chr5 48104473 48104780 -154980752 + AluJo SINE Alu 1 311 -1 5637 155 40 22 chr5 48104780 48105575 -154979957 - MER4-int LTR ERV1 -1479 5119 4294 1438 157 45 11 chr5 48105575 48105861 -154979671 + AluSx SINE Alu 1 296 -16 5637 155 40 22 chr5 48105861 48106192 -154979340 - MER4-int LTR ERV1 -2304 4294 3970 234 291 196 20 chr5 48106848 48106915 -154978617 - MER69A DNA AcHobo -2352 174 120 2123 118 3 0 chr5 48106915 48107219 -154978313 + AluSx SINE Alu 1 305 -7 234 291 196 20 chr5 48107219 48107299 -154978233 - MER69A DNA AcHobo -2406 120 1 750 248 71 50 chr5 48107773 48108095 -154977437 + L1M4 LINE L1 3703 4031 -2115 1566 159 222 17 chr5 48108099 48108557 -154976975 + LTR49 LTR ERV1 165 593 -2 2041 165 24 13 chr5 48108561 48108937 -154976595 + LTR49-int LTR ERV1 1 380 -5951 1925 125 0 0 chr5 48108937 48109217 -154976315 - AluSx SINE Alu -17 295 16 1349 169 97 18 chr5 48109219 48109497 -154976035 - AluJo SINE Alu -12 300 1 280 183 21 151 chr5 48109499 48109592 -154975940 - MER34C LTR ERV1 -492 93 13 1270 120 4 52 chr5 48110105 48110228 -154975304 + AluSg/x SINE Alu 67 177 -135 6492 181 52 12 chr5 48110228 48111258 -154974274 + MER11C LTR ERVK 1 1071 0 1270 120 4 52 chr5 48111258 48111388 -154974144 + AluSg/x SINE Alu 177 312 0 265 261 22 65 chr5 48111474 48111612 -154973920 + MER104 DNA Tc2 5 136 -44 1483 175 3 26 chr5 48111655 48111963 -154973569 - AluJo SINE Alu -8 304 4 743 171 0 0 chr5 48112399 48112528 -154973004 - AluJo SINE Alu -75 237 109 1457 157 33 30 chr5 48113364 48113669 -154971863 + AluJo SINE Alu 7 312 0 313 275 151 2 chr5 48113670 48113824 -154971708 + L1MCa LINE L1 1140 2108 -1185 1795 108 29 4 chr5 48113922 48114199 -154971333 - AluSx SINE Alu -14 298 15 23 0 0 0 chr5 48115969 48115992 -154969540 + AT_rich Low_complexity Low_complexity 1 23 0 381 132 9 123 chr5 48117243 48117349 -154968183 + L1MC4 LINE L1 7752 7845 -197 1735 127 12 0 chr5 48117398 48117657 -154967875 - AluSx SINE Alu -39 273 12 1618 119 50 53 chr5 48117719 48118021 -154967511 + AluSq SINE Alu 5 305 -8 527 270 125 85 chr5 48118422 48118654 -154966878 - LTR33 LTR ERVL -19 502 281 1464 205 0 7 chr5 48118654 48118823 -154966709 - AluJo SINE Alu -7 305 136 287 43 0 43 chr5 48118823 48118869 -154966663 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 1973 101 29 4 chr5 48118869 48119145 -154966387 - AluSq SINE Alu -30 283 1 1464 205 0 7 chr5 48119145 48119271 -154966261 - AluJo SINE Alu -174 138 11 527 270 125 85 chr5 48119271 48119519 -154966013 - LTR33 LTR ERVL -240 281 3 1900 141 3 3 chr5 48119556 48119854 -154965678 - AluSx SINE Alu -14 298 1 2225 269 37 33 chr5 48119954 48120268 -154965264 + L1M4 LINE L1 3473 3784 -2362 2268 72 0 23 chr5 48120268 48120574 -154964958 + AluY SINE Alu 1 299 -12 2225 269 37 33 chr5 48120574 48121087 -154964445 + L1M4 LINE L1 3784 4304 -1842 2047 103 10 0 chr5 48121407 48121709 -154963823 - AluSq SINE Alu -8 305 1 1337 170 73 28 chr5 48123102 48123390 -154962142 - L1PA16 LINE L1 -7 6159 5859 721 183 77 48 chr5 48123436 48123644 -154961888 - AluJb SINE Alu -16 296 83 2008 110 0 35 chr5 48123686 48124003 -154961529 - AluY SINE Alu -5 306 1 1870 134 24 0 chr5 48124469 48124761 -154960771 + AluSq SINE Alu 1 299 -14 1739 164 0 43 chr5 48125025 48125348 -154960184 + AluJb SINE Alu 1 309 -3 214 355 52 26 chr5 48125365 48125596 -154959936 + MIR SINE MIR 9 245 -17 185 389 0 0 chr5 48125841 48125913 -154959619 - L2 LINE L2 -7 3265 3194 1978 150 3 10 chr5 48126885 48127192 -154958340 + AluSq SINE Alu 3 307 -6 323 203 31 0 chr5 48127207 48127271 -154958261 - MER75 DNA T2_type -448 66 1 1462 194 0 52 chr5 48127687 48127997 -154957535 - AluJo SINE Alu -17 295 2 1413 129 0 14 chr5 48128056 48128265 -154957267 - AluSg/x SINE Alu -14 298 93 3053 68 63 0 chr5 48128265 48128662 -154956870 - MER11D LTR ERVK 0 897 476 7443 44 24 0 chr5 48128662 48129659 -154955873 - L1PA4 LINE L1 -5 6150 5147 914 138 14 7 chr5 48129773 48129918 -154955614 + AluSc SINE Alu 152 297 -12 1746 194 3 0 chr5 48130139 48130443 -154955089 + AluJo SINE Alu 1 305 -7 5377 168 47 31 chr5 48130451 48131258 -154954274 - MER4B-int LTR ERV1 -1489 5109 4316 1672 197 0 0 chr5 48131258 48131537 -154953995 + AluJb SINE Alu 1 279 -33 369 0 0 0 chr5 48131537 48131578 -154953954 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 5377 168 47 31 chr5 48131578 48131979 -154953553 - MER4B-int LTR ERV1 -2281 4317 3881 444 126 13 86 chr5 48131975 48132126 -154953406 - MER4B-int LTR ERV1 -4757 2001 1862 * 1669 129 35 0 chr5 48132139 48132394 -154953138 - AluSx SINE Alu -18 294 31 31 58 0 0 chr5 48133607 48133659 -154951873 + AT_rich Low_complexity Low_complexity 1 52 0 184 67 0 67 chr5 48133867 48133912 -154951620 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 2063 89 18 32 chr5 48134294 48134575 -154950957 + AluSq SINE Alu 37 313 0 2153 119 7 0 chr5 48134824 48135134 -154950398 + AluSx SINE Alu 1 312 0 21 0 0 0 chr5 48135358 48135379 -154950153 + GC_rich Low_complexity Low_complexity 1 21 0 2365 81 3 0 chr5 48137464 48137761 -154947771 - AluSc SINE Alu -11 298 1 225 0 0 0 chr5 48138812 48138837 -154946695 + (T)n Simple_repeat Simple_repeat 1 25 0 30 59 0 0 chr5 48139014 48139065 -154946467 + AT_rich Low_complexity Low_complexity 1 51 0 3915 114 34 16 chr5 48139217 48139841 -154945691 - L1PA13 LINE L1 -3 6160 5526 2031 128 0 4 chr5 48140141 48140445 -154945087 + AluSg SINE Alu 2 304 0 380 266 46 28 chr5 48140859 48140968 -154944564 - MLT1A2 LTR MaLR -90 284 174 198 209 0 0 chr5 48140969 48141012 -154944520 + GA-rich Low_complexity Low_complexity 2 44 0 658 176 61 34 chr5 48141046 48141194 -154944338 - MLT1A2 LTR MaLR -222 152 1 222 37 0 0 chr5 48141326 48141353 -154944179 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 6674 168 12 34 chr5 48141379 48142666 -154942866 - LTR57-int LTR ERVL -3512 1831 573 2477 57 0 10 chr5 48142666 48142967 -154942565 + AluY SINE Alu 1 298 -13 643 242 0 8 chr5 48143091 48143219 -154942313 + LTR57-int LTR ERVL 8 134 -5209 462 349 18 22 chr5 48143235 48143507 -154942025 + L1ME LINE L1 5463 5733 -429 * 578 154 31 33 chr5 48143469 48143635 -154941897 - L1M4 LINE L1 -680 5494 5335 2144 203 80 2 chr5 48143653 48144091 -154941441 + MER70A LTR ERVL 1 472 0 1665 98 18 4 chr5 48144193 48144418 -154941114 - AluSg/x SINE Alu -17 295 68 274 32 0 0 chr5 48144418 48144449 -154941083 + AluY SINE Alu 14 44 -259 237 159 0 0 chr5 48146002 48146046 -154939486 + CT-rich Low_complexity Low_complexity 2 45 0 411 21 0 0 chr5 48146471 48146519 -154939013 + (CA)n Simple_repeat Simple_repeat 2 49 0 2362 157 47 93 chr5 48147177 48147687 -154937845 - MER4B LTR ERV1 -11 768 236 2295 53 42 3 chr5 48147687 48147971 -154937561 - AluY SINE Alu -16 295 1 1932 134 4 0 chr5 48147971 48148247 -154937285 - AluSx SINE Alu -29 283 7 2362 157 47 93 chr5 48148247 48148367 -154937165 - MER4B LTR ERV1 -541 238 1 2108 125 7 3 chr5 48148516 48148820 -154936712 + AluSp SINE Alu 1 305 -8 1260 220 14 4 chr5 48150120 48150397 -154935135 - AluJb SINE Alu -28 284 5 180 245 0 0 chr5 48150604 48150657 -154934875 + CT-rich Low_complexity Low_complexity 3 55 0 201 162 0 0 chr5 48151232 48151269 -154934263 + A-rich Low_complexity Low_complexity 1 37 0 394 152 5 0 chr5 48151681 48151753 -154933779 - AluJ/FLAM SINE Alu -244 58 1 221 294 91 57 chr5 48151760 48152025 -154933507 - L2 LINE L2 -5 3308 3035 414 203 0 0 chr5 48152075 48152149 -154933383 + AluJ/FLAM SINE Alu 1 74 -238 4124 56 2 0 chr5 48152159 48152644 -154932888 + MER11D LTR ERVK 1 486 -411 40104 71 5 24 chr5 48152646 48157927 -154927605 + L1P LINE L1 1 5383 -763 2100 103 17 10 chr5 48157927 48158228 -154927304 + AluSg SINE Alu 1 303 -7 40104 71 5 24 chr5 48158228 48158304 -154927228 + L1P LINE L1 5377 5254 -887 7448 38 7 0 chr5 48158304 48159193 -154926339 + L1PA4 LINE L1 5254 6148 -7 540 256 88 47 chr5 48160755 48161095 -154924437 + L1M4 LINE L1 3705 4058 -2088 290 206 0 43 chr5 48162347 48162439 -154923093 - AluY SINE Alu 0 301 214 1647 179 30 27 chr5 48162577 48162913 -154922619 - MER1B DNA MER1_type 0 337 1 29 60 0 0 chr5 48163725 48163775 -154921757 + AT_rich Low_complexity Low_complexity 1 50 0 3880 136 11 0 chr5 48163933 48164558 -154920974 - L1PA13 LINE L1 -6 6157 5526 397 277 9 9 chr5 48165237 48165349 -154920183 - MLT1A2 LTR MaLR -90 284 173 216 264 0 0 chr5 48165349 48165402 -154920130 + GA-rich Low_complexity Low_complexity 2 54 0 770 139 44 44 chr5 48165420 48165578 -154919954 - MLT1A2 LTR MaLR -216 158 1 21 0 0 0 chr5 48165744 48165765 -154919767 + AT_rich Low_complexity Low_complexity 1 21 0 204 191 63 0 chr5 48165818 48165881 -154919651 + (TTAA)n Simple_repeat Simple_repeat 3 69 0 6988 161 29 25 chr5 48165907 48166229 -154919303 - LTR57-int LTR ERVL -3512 1831 1512 2525 59 0 3 chr5 48166229 48166534 -154918998 + AluY SINE Alu 1 304 -7 6988 161 29 25 chr5 48166534 48167500 -154918032 - LTR57-int LTR ERVL -3831 1512 538 640 227 23 8 chr5 48167570 48167702 -154917830 + LTR57-int LTR ERVL 1 134 -5209 612 295 46 69 chr5 48167718 48168199 -154917333 + L1ME3 LINE L1 5463 5932 -230 23 0 0 0 chr5 48168903 48168926 -154916606 + AT_rich Low_complexity Low_complexity 1 23 0 1505 122 14 34 chr5 48169092 48169386 -154916146 + AluY SINE Alu 17 304 -7 1637 74 0 5 chr5 48169386 48169588 -154915944 - AluSq SINE Alu -112 201 1 609 201 23 114 chr5 48169628 48169847 -154915685 - L1PA16 LINE L1 -5 6161 5963 1149 148 17 0 chr5 48169848 48170024 -154915508 - AluSx SINE Alu -9 303 125 527 55 95 18 chr5 48170024 48170299 -154915233 + (TA)n Simple_repeat Simple_repeat 1 296 0 926 86 0 72 chr5 48170299 48170438 -154915094 - AluSx SINE Alu -184 129 1 537 165 97 0 chr5 48170439 48170542 -154914990 - L1PA16 LINE L1 -195 5971 5859 300 181 12 84 chr5 48170540 48170623 -154914909 - L1 LINE L1 -1396 4750 4674 * 1046 171 45 36 chr5 48170633 48170855 -154914677 - AluJb SINE Alu -6 306 83 1490 196 56 3 chr5 48171610 48171896 -154913636 + AluJb SINE Alu 1 301 -11 2282 106 3 0 chr5 48171902 48172205 -154913327 + AluSp SINE Alu 1 304 -9 2642 43 0 0 chr5 48173156 48173456 -154912076 - AluY SINE Alu -11 300 1 427 194 0 0 chr5 48173789 48173861 -154911671 - MER75 DNA T2_type -442 72 1 1577 206 0 29 chr5 48174310 48174616 -154910916 - AluJo SINE Alu -15 297 1 2007 146 0 10 chr5 48174681 48174983 -154910549 - AluSx SINE Alu -13 299 1 1567 199 7 0 chr5 48175337 48175618 -154909914 + AluJo SINE Alu 5 287 -25 5508 159 42 51 chr5 48175655 48176114 -154909418 - MER4B-int LTR ERV1 -1489 5109 4647 8946 38 20 1 chr5 48176114 48177165 -154908367 - MER11C LTR ERVK 0 1071 1 5508 159 42 51 chr5 48177165 48177509 -154908023 - MER4B-int LTR ERV1 -1951 4647 4301 1780 189 0 0 chr5 48177509 48177806 -154907726 + AluJb SINE Alu 1 297 -15 5508 159 42 51 chr5 48177806 48178160 -154907372 - MER4B-int LTR ERV1 -2297 4301 3945 1829 123 4 4 chr5 48178160 48178429 -154907103 - AluSg SINE Alu 0 310 42 5508 159 42 51 chr5 48178429 48178862 -154906670 - MER4B-int LTR ERV1 -2653 3945 3509 2277 98 0 0 chr5 48178862 48179149 -154906383 + AluSc SINE Alu 1 287 -22 180 0 0 0 chr5 48179156 48179176 -154906356 + (TAA)n Simple_repeat Simple_repeat 2 21 0 5508 159 42 51 chr5 48179176 48179391 -154906141 - MER4B-int LTR ERV1 -3095 3503 3305 2341 89 7 0 chr5 48179391 48179684 -154905848 - AluY SINE Alu -16 295 1 868 146 46 0 chr5 48179684 48179814 -154905718 - AluSq/x SINE Alu -176 136 1 2707 145 18 71 chr5 48179820 48180125 -154905407 - MER4B-int LTR ERV1 -4113 2485 2165 2824 145 142 42 chr5 48180125 48180786 -154904746 + LTR8A LTR ERV1 1 727 0 2707 145 18 71 chr5 48180786 48181228 -154904304 - MER4B-int LTR ERV1 -4433 2165 970 26 64 0 0 chr5 48182492 48182539 -154902993 + AT_rich Low_complexity Low_complexity 1 47 0 206 79 0 26 chr5 48182752 48182790 -154902742 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 2728 29 0 3 chr5 48183102 48183412 -154902120 - AluY SINE Alu -2 309 1 182 88 0 29 chr5 48186530 48186564 -154898968 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 196 151 19 19 chr5 48187159 48187212 -154898320 + GA-rich Low_complexity Low_complexity 3 55 0 296 24 0 24 chr5 48187255 48187297 -154898235 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1448 191 7 7 chr5 48187451 48187728 -154897804 + AluJb SINE Alu 5 281 -31 2637 59 0 0 chr5 48188312 48188615 -154896917 + AluY SINE Alu 1 303 -8 1992 103 41 0 chr5 48189017 48189288 -154896244 + AluSq SINE Alu 24 305 -8 2284 75 0 3 chr5 48189288 48189570 -154895962 + AluY SINE Alu 1 281 -30 2659 161 66 23 chr5 48190032 48190611 -154894921 + MER4B LTR ERV1 1 768 -11 372 22 0 0 chr5 48191275 48191320 -154894212 + (TG)n Simple_repeat Simple_repeat 2 46 0 396 291 33 46 chr5 48192006 48192157 -154893375 - LTR33 LTR ERVL -356 165 17 939 156 134 6 chr5 48192260 48192439 -154893093 - AluSq SINE Alu -45 268 67 29 60 0 0 chr5 48193018 48193068 -154892464 + AT_rich Low_complexity Low_complexity 1 50 0 2058 104 17 0 chr5 48193330 48193617 -154891915 + AluSx SINE Alu 1 292 -20 1688 163 119 18 chr5 48193962 48194373 -154891159 - MER61D LTR ERV1 0 501 1 2144 77 22 0 chr5 48194868 48195162 -154890370 + AluSc SINE Alu 1 300 0 615 265 41 6 chr5 48195884 48196054 -154889478 + MER90 LTR ERV1 439 614 0 2250 69 0 14 chr5 48196158 48196449 -154889083 + AluY SINE Alu 1 287 -24 207 0 0 0 chr5 48196460 48196483 -154889049 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1110 143 0 24 chr5 48196483 48196651 -154888881 + AluSg/x SINE Alu 125 288 -22 2758 162 49 4 chr5 48197790 48198296 -154887236 - L1MB3 LINE L1 -192 5991 5463 2290 107 0 0 chr5 48198416 48198707 -154886825 - AluSq SINE Alu -22 291 1 218 57 57 0 chr5 48198800 48198835 -154886697 + CT-rich Low_complexity Low_complexity 4 40 0 1658 172 47 14 chr5 48198838 48199134 -154886398 - AluJo SINE Alu -6 306 1 1735 187 0 13 chr5 48199407 48199707 -154885825 - AluSx SINE Alu -16 296 1 2262 292 50 17 chr5 48199737 48200658 -154884874 + L1M4 LINE L1 3356 4306 -1840 216 0 0 0 chr5 48201087 48201111 -154884421 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1371 184 75 18 chr5 48202220 48202498 -154883034 - L1PA16 LINE L1 -14 6152 5859 189 0 0 0 chr5 48202543 48202564 -154882968 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 907 177 79 129 chr5 48202595 48202912 -154882620 - AluJb SINE Alu 0 302 2 622 231 0 15 chr5 48202918 48203052 -154882480 - FLAM_C SINE Alu -1 132 1 1810 188 10 0 chr5 48203120 48203429 -154882103 - AluSx SINE Alu 0 312 1 744 97 16 32 chr5 48203568 48203692 -154881840 + AluSp SINE Alu 2 123 -190 189 154 0 0 chr5 48203857 48203896 -154881636 + A-rich Low_complexity Low_complexity 1 39 0 1172 216 5 67 chr5 48203970 48204359 -154881173 + MER41B LTR ERV1 224 588 -47 302 193 45 91 chr5 48204327 48204415 -154881117 + MER66B LTR ERV1 403 486 0 * 303 185 0 15 chr5 48205247 48205312 -154880220 - AluJ/FRAM SINE Alu -6 296 233 1496 166 60 42 chr5 48205467 48205798 -154879734 + MER1B DNA MER1_type 1 337 0 1015 153 21 168 chr5 48207333 48207666 -154877866 - MLT1A2 LTR MaLR -90 284 1 1171 129 10 35 chr5 48208217 48208418 -154877114 - MSTC LTR MaLR -232 196 1 261 65 87 0 chr5 48209126 48209172 -154876360 - L1MB4 LINE L1 -1 6179 6130 1521 217 59 30 chr5 48209492 48209951 -154875581 - MER41B LTR ERV1 0 585 109 2115 115 10 0 chr5 48210243 48210538 -154874994 - AluSq SINE Alu -15 298 1 207 88 0 0 chr5 48210939 48210973 -154874559 + (TG)n Simple_repeat Simple_repeat 2 35 0 2148 107 4 0 chr5 48210973 48211254 -154874278 - AluSg SINE Alu -28 282 1 210 270 27 14 chr5 48211598 48211672 -154873860 - MIR SINE MIR -141 121 47 1296 66 38 89 chr5 48211748 48211961 -154873571 + AluY SINE Alu 108 309 -2 2164 96 38 0 chr5 48212018 48212311 -154873221 - AluSp SINE Alu -8 305 2 568 274 53 41 chr5 48214465 48214783 -154870749 + L1M4 LINE L1 3737 4058 -2088 405 198 0 0 chr5 48216043 48216124 -154869408 - AluJ/FRAM SINE Alu 0 312 232 1921 166 9 21 chr5 48216281 48216618 -154868914 - MER1B DNA MER1_type -6 333 1 23 78 0 0 chr5 48217430 48217481 -154868051 + AT_rich Low_complexity Low_complexity 1 51 0 1290 159 19 24 chr5 48217682 48217762 -154867770 - L1PA13 LINE L1 -21 6142 6063 2317 127 31 3 chr5 48217762 48218116 -154867416 - THE1B LTR MaLR 0 364 1 1290 159 19 24 chr5 48218116 48218287 -154867245 - L1PA13 LINE L1 -100 6063 5888 680 219 15 0 chr5 48219409 48219546 -154865986 + L1M3 LINE L1 5569 5707 -476 2430 43 11 0 chr5 48219546 48219852 -154865680 - AluY SINE Alu 0 309 1 450 318 71 24 chr5 48221065 48221402 -154864130 - L1M4 LINE L1 -2090 4056 3704 1572 114 9 0 chr5 48222875 48223085 -154862447 + AluSg/x SINE Alu 97 308 -2 198 0 0 0 chr5 48223106 48223128 -154862404 + (CAA)n Simple_repeat Simple_repeat 3 24 0 347 157 83 66 chr5 48223147 48223268 -154862264 + L2 LINE L2 1897 2019 -1295 757 250 57 20 chr5 48223351 48223675 -154861857 + L1MC5 LINE L1 6923 7176 -632 345 212 242 35 chr5 48223765 48223963 -154861569 + L1MC5 LINE L1 7276 7514 -447 1494 199 11 28 chr5 48223975 48224261 -154861271 + AluJo SINE Alu 1 281 -31 357 177 0 0 chr5 48224263 48224342 -154861190 + (TA)n Simple_repeat Simple_repeat 1 79 0 1345 154 202 4 chr5 48225516 48225769 -154859763 + AluSx SINE Alu 2 304 -8 572 325 33 10 chr5 48225896 48226198 -154859334 + L2 LINE L2 1785 2093 -1221 2139 205 14 70 chr5 48226382 48226899 -154858633 - LTR64 LTR ERVK -70 488 1 760 208 30 6 chr5 48226899 48227067 -154858465 + MER3 DNA MER1_type 34 205 -4 25 31 0 0 chr5 48227565 48227597 -154857935 + AT_rich Low_complexity Low_complexity 1 32 0 1673 319 166 27 chr5 48228051 48228585 -154856947 - L2 LINE L2 0 3313 2854 1628 184 7 3 chr5 48228585 48228873 -154856659 + AluJo SINE Alu 11 299 -13 1673 319 166 27 chr5 48228873 48229790 -154855742 - L2 LINE L2 -459 2854 1666 3158 123 9 61 chr5 48230351 48230991 -154854541 - MER4B LTR ERV1 0 779 1 2700 219 42 32 chr5 48231068 48232099 -154853433 + L1M4c LINE L1 2053 3099 -3283 190 365 0 0 chr5 48232125 48232188 -154853344 + MER5A DNA MER1_type 87 149 -40 263 241 60 24 chr5 48232334 48232417 -154853115 - MLT1K LTR MaLR -31 557 472 319 281 0 16 chr5 48232735 48232856 -154852676 - L1ME4a LINE L1 -217 5904 5786 645 201 43 18 chr5 48232861 48233025 -154852507 - MLT1F1 LTR MaLR -2 565 398 763 195 13 0 chr5 48233025 48233174 -154852358 + L1MA9 LINE L1 6005 6155 -157 452 314 83 22 chr5 48233222 48233585 -154851947 + LTR16C LTR ERVL 99 483 -8 402 21 0 0 chr5 48235380 48235427 -154850105 + (CA)n Simple_repeat Simple_repeat 2 48 0 426 296 138 5 chr5 48236452 48236655 -154848877 - MIR SINE MIR 0 262 33 381 240 55 65 chr5 48237568 48237768 -154847764 - MIR SINE MIR 0 262 65 345 224 86 43 chr5 48239247 48239363 -154846169 + MIR SINE MIR 81 201 -61 255 284 0 27 chr5 48239407 48239481 -154846051 - L2 LINE L2 -47 3266 3195 263 224 15 104 chr5 48239739 48239873 -154845659 + LTR16A1 LTR ERVL 3 124 -333 282 254 0 0 chr5 48240660 48240770 -154844762 + (TG)n Simple_repeat Simple_repeat 2 111 0 197 174 23 46 chr5 48240924 48240978 -154844554 - MIR SINE MIR -114 94 42 805 284 144 27 chr5 48241114 48241565 -154843967 - LTR33 LTR ERVL -10 511 8 2344 90 0 0 chr5 48242210 48242511 -154843021 - AluY SINE Alu -10 301 1 884 167 70 0 chr5 48243278 48243464 -154842068 + L1PB1 LINE L1 2 200 -6663 10316 90 41 5 chr5 48243466 48245677 -154839855 + L1PB1 LINE L1 636 3056 -3806 36153 74 28 4 chr5 48245684 48251683 -154833849 - L1PA6 LINE L1 0 6154 11 12930 183 10 4 chr5 48251693 48255498 -154830034 + L1PB1 LINE L1 3040 6866 -1 260 279 88 7 chr5 48256758 48256894 -154828638 - L1MEc LINE L1 -5073 1323 1177 298 261 0 11 chr5 48257017 48257105 -154828427 - L1MEc LINE L1 -6271 125 39 966 199 23 23 chr5 48257325 48257541 -154827991 - MER20 DNA MER1_type -3 216 1 429 305 4 49 chr5 48258258 48258503 -154827029 - MIR SINE MIR -27 235 6 506 236 216 0 chr5 48258820 48258968 -154826564 + MER5A DNA MER1_type 10 189 0 216 374 84 23 chr5 48259400 48259531 -154826001 + MIR3 SINE MIR 27 165 -43 524 329 70 20 chr5 48260464 48260807 -154824725 + LTR16C LTR ERVL 99 458 -33 398 245 124 26 chr5 48260854 48261183 -154824349 - L1MEc LINE L1 -3333 2882 2521 302 174 3 31 chr5 48261348 48261434 -154824098 - MER4C LTR ERV1 0 610 383 1458 149 57 19 chr5 48261614 48261930 -154823602 - MER4A LTR ERV1 -336 328 1 22 35 0 0 chr5 48262119 48262148 -154823384 + AT_rich Low_complexity Low_complexity 1 29 0 727 249 6 0 chr5 48262187 48262356 -154823176 + MER58B DNA MER1_type 172 341 0 1541 103 0 0 chr5 48262585 48262780 -154822752 + AluSg/x SINE Alu 106 300 -10 180 0 0 0 chr5 48262976 48262996 -154822536 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 837 174 0 0 chr5 48263273 48263405 -154822127 + FLAM_C SINE Alu 1 132 -1 180 0 0 0 chr5 48263768 48263788 -154821744 + (TTTTA)n Simple_repeat Simple_repeat 5 24 0 256 348 22 11 chr5 48263817 48264001 -154821531 - L1MEc LINE L1 -4813 1583 1398 21 0 0 0 chr5 48264363 48264384 -154821148 + AT_rich Low_complexity Low_complexity 1 21 0 620 205 0 9 chr5 48264384 48264496 -154821036 - FLAM_A SINE Alu -21 121 11 386 226 29 58 chr5 48264602 48264739 -154820793 + MIR SINE MIR 118 250 -12 206 326 82 22 chr5 48264819 48264954 -154820578 + L2 LINE L2 1603 1745 -1569 2030 80 44 7 chr5 48264978 48265253 -154820279 + AluSc SINE Alu 13 297 -12 3949 163 14 9 chr5 48265272 48266008 -154819524 - L1MB3 LINE L1 -1 6182 5444 1236 202 73 37 chr5 48266011 48266698 -154818834 - L1ME LINE L1 -497 5669 4914 2310 67 0 64 chr5 48267184 48267511 -154818021 - AluY SINE Alu -4 307 2 205 57 86 0 chr5 48267874 48267909 -154817623 + A-rich Low_complexity Low_complexity 2 39 0 366 294 5 98 chr5 48267929 48268053 -154817479 + MIR3 SINE MIR 33 136 -72 2286 97 7 0 chr5 48268053 48268351 -154817181 - AluSq SINE Alu -13 300 1 366 294 5 98 chr5 48268351 48268410 -154817122 + MIR3 SINE MIR 136 199 -9 7381 39 2 0 chr5 48268761 48270409 -154815123 + L1PA4 LINE L1 4506 6155 0 622 233 0 9 chr5 48270439 48270555 -154814977 - AluJb SINE Alu -195 117 3 1651 221 73 53 chr5 48271302 48271853 -154813679 + MER68 LTR ERV1 1 562 0 414 229 57 130 chr5 48271933 48272059 -154813473 + MER5B DNA MER1_type 1 110 -68 2249 101 0 19 chr5 48272059 48272366 -154813166 - AluSc SINE Alu -8 301 1 414 229 57 130 chr5 48272366 48272431 -154813101 + MER5B DNA MER1_type 110 178 0 241 54 0 0 chr5 48272738 48272775 -154812757 - L1P LINE L1 -818 5336 5300 1555 32 5 0 chr5 48272775 48272964 -154812568 + L1PA4 LINE L1 5966 6155 0 32 26 0 0 chr5 48272988 48273027 -154812505 + AT_rich Low_complexity Low_complexity 1 39 0 532 247 46 17 chr5 48274677 48274851 -154810681 - MIR SINE MIR 0 262 84 1836 184 34 11 chr5 48275172 48275553 -154809979 - MLT1B LTR MaLR 0 390 1 1449 248 83 19 chr5 48276605 48277073 -154808459 - MLT1F1 LTR MaLR 0 567 70 4691 110 56 72 chr5 48277074 48278527 -154807005 - pTR5 LTR ERV1 0 2606 1524 309 246 0 0 chr5 48278530 48278599 -154806933 - MLT1F1 LTR MaLR -473 69 1 5281 123 30 0 chr5 48278830 48279576 -154805956 - L1PA14 LINE L1 0 6161 5369 6936 68 26 0 chr5 48279576 48280450 -154805082 + MER11D LTR ERVK 1 897 0 5281 123 30 0 chr5 48280450 48281087 -154804445 - L1PA14 LINE L1 -792 5369 4753 639 300 116 4 chr5 48281647 48281880 -154803652 - MIR SINE MIR -2 260 2 600 264 109 49 chr5 48281906 48282122 -154803410 - L2 LINE L2 -3 3310 3071 1944 142 0 0 chr5 48282122 48282424 -154803108 - AluSx SINE Alu 0 302 1 600 264 109 49 chr5 48282424 48282490 -154803042 - L2 LINE L2 -242 3071 3010 447 288 207 27 chr5 48282494 48282716 -154802816 + MIR SINE MIR 1 262 0 510 343 66 26 chr5 48282716 48282981 -154802551 - L2 LINE L2 -268 3004 2731 835 195 151 0 chr5 48282981 48283166 -154802366 - MER20 DNA MER1_type -5 214 2 2008 319 75 14 chr5 48283166 48283978 -154801554 - L2 LINE L2 -605 2709 1848 213 217 0 0 chr5 48284156 48284202 -154801330 + (TAGG)n Simple_repeat Simple_repeat 2 47 0 1332 170 0 0 chr5 48284382 48284600 -154800932 - LOR1a LTR ERV1 0 497 280 357 134 76 199 chr5 48284614 48284694 -154800838 - LOR1a LTR ERV1 -347 150 100 2359 95 3 0 chr5 48284694 48284998 -154800534 + AluSp SINE Alu 1 305 -8 357 134 76 199 chr5 48284998 48285088 -154800444 - LOR1a LTR ERV1 -397 100 1 201 254 84 28 chr5 48285312 48285383 -154800149 + L2 LINE L2 3198 3272 0 3176 74 16 0 chr5 48286211 48286641 -154798891 + L1PA13 LINE L1 5724 6160 -3 235 346 116 14 chr5 48286739 48287076 -154798456 + L2 LINE L2 2651 3079 -193 357 82 0 0 chr5 48288429 48288478 -154797054 + (TG)n Simple_repeat Simple_repeat 2 50 0 649 213 0 8 chr5 48288485 48288607 -154796925 - FLAM_C SINE Alu -12 121 1 377 334 56 35 chr5 48288704 48288720 -154796812 - MLT1J LTR MaLR -30 481 467 3658 132 153 51 chr5 48288720 48289469 -154796063 - LTR1B LTR ERV1 0 826 1 377 334 56 35 chr5 48289469 48289826 -154795706 - MLT1J LTR MaLR -44 467 100 679 240 32 7 chr5 48289934 48290088 -154795444 - MIR SINE MIR -98 164 7 228 241 0 0 chr5 48290154 48290212 -154795320 + (TG)n Simple_repeat Simple_repeat 2 59 0 217 367 19 13 chr5 48290985 48291143 -154794389 + L3 LINE CR1 1353 1511 -66 243 227 0 0 chr5 48291500 48291566 -154793966 + (TA)n Simple_repeat Simple_repeat 1 66 0 554 245 176 34 chr5 48291621 48291825 -154793707 + MIR SINE MIR 30 262 0 230 269 0 0 chr5 48291998 48292050 -154793482 + (CATA)n Simple_repeat Simple_repeat 4 55 0 3909 127 22 9 chr5 48292097 48292742 -154792790 - MER39B LTR ERV1 0 653 1 23 0 0 0 chr5 48292907 48292930 -154792602 + AT_rich Low_complexity Low_complexity 1 23 0 737 76 29 0 chr5 48293197 48293302 -154792230 - MER30B DNA MER1_type -82 108 1 338 316 36 65 chr5 48293514 48293653 -154791879 + L2 LINE L2 3122 3256 -16 2117 122 10 0 chr5 48293785 48294089 -154791443 - AluSq SINE Alu -6 307 1 305 197 0 0 chr5 48294108 48294169 -154791363 - Alu SINE Alu -7 295 235 1581 174 34 34 chr5 48294218 48294546 -154790986 + MER61C LTR ERV1 104 431 -3 548 214 31 0 chr5 48294547 48294645 -154790887 - FRAM SINE Alu -72 104 4 3909 64 8 0 chr5 48294909 48295395 -154790137 - LTR2B LTR ERV1 0 490 1 23428 109 7 8 chr5 48295395 48298941 -154786591 - Harlequin LTR ERV1 0 6896 3352 6358 64 16 20 chr5 48298940 48299947 -154785585 - Harlequin LTR ERV1 -4322 2574 1572 * 4374 77 12 22 chr5 48299932 48300580 -154784952 - Harlequin LTR ERV1 -5993 903 262 * 768 102 8 0 chr5 48300575 48300693 -154784839 - Harlequin LTR ERV1 -6516 380 262 * 2413 107 8 16 chr5 48300688 48301071 -154784461 - Harlequin LTR ERV1 -6516 380 1 3763 59 34 0 chr5 48301071 48301545 -154783987 - LTR2B LTR ERV1 0 490 1 2225 92 0 0 chr5 48303963 48304279 -154781253 + AluSg SINE Alu 1 316 0 430 294 83 52 chr5 48304493 48304745 -154780787 + MIR SINE MIR 2 261 -1 27 29 0 0 chr5 48304825 48304859 -154780673 + AT_rich Low_complexity Low_complexity 1 34 0 2371 74 0 37 chr5 48305771 48306094 -154779438 - AluY SINE Alu 0 311 1 299 213 154 15 chr5 48306710 48306846 -154778686 + L1ME4a LINE L1 5963 6117 -4 23 33 0 0 chr5 48306955 48306985 -154778547 + AT_rich Low_complexity Low_complexity 1 30 0 1468 147 60 23 chr5 48307028 48307327 -154778205 + MER2 DNA MER2_type 1 310 -35 364 302 83 79 chr5 48307905 48308398 -154777134 + L2 LINE L2 1898 2392 -922 24 32 0 0 chr5 48309038 48309069 -154776463 + AT_rich Low_complexity Low_complexity 1 31 0 2394 49 0 0 chr5 48310255 48310541 -154774991 - AluY SINE Alu -25 286 1 21 36 0 0 chr5 48310960 48310988 -154774544 + AT_rich Low_complexity Low_complexity 1 28 0 209 215 123 0 chr5 48311259 48311324 -154774208 - MIR SINE MIR -74 188 116 439 254 16 60 chr5 48311601 48311786 -154773746 - MER104 DNA MER2_type -3 177 1 2237 115 0 0 chr5 48311813 48312117 -154773415 + AluSc SINE Alu 1 304 -5 1943 163 0 0 chr5 48312780 48313087 -154772445 - AluJb SINE Alu -5 307 1 286 227 135 123 chr5 48315536 48315699 -154769833 - MER5B DNA MER1_type -9 169 5 210 37 0 0 chr5 48316250 48316277 -154769255 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1897 101 11 18 chr5 48316582 48316858 -154768674 - AluSq SINE Alu -39 274 1 239 311 30 24 chr5 48317200 48317364 -154768168 + L1MEd LINE L1 926 1090 -5029 266 204 35 97 chr5 48317366 48317479 -154768053 - MLT2F LTR ERVL -93 570 465 25 75 0 0 chr5 48317898 48317951 -154767581 + AT_rich Low_complexity Low_complexity 1 53 0 186 344 16 0 chr5 48318058 48318119 -154767413 + L2 LINE L2 3250 3311 -2 4711 20 0 2 chr5 48318472 48319016 -154766516 - L1PA3 LINE L1 -3 6152 5610 1154 279 78 26 chr5 48319046 48319957 -154765575 - L1MEc LINE L1 -3355 3586 2678 616 293 51 5 chr5 48319968 48320183 -154765349 + MLT2F LTR ERVL 3 227 -436 492 347 108 11 chr5 48320234 48320586 -154764946 + MLT2F LTR ERVL 189 574 -89 279 304 29 6 chr5 48320623 48320794 -154764738 - L1MEc LINE L1 -5087 1857 1683 2163 130 0 0 chr5 48320815 48321116 -154764416 + AluSx SINE Alu 1 301 -11 229 237 0 13 chr5 48321133 48321209 -154764323 - L1MEc LINE L1 -4955 1468 1394 2084 222 55 6 chr5 48321278 48321804 -154763728 - L1ME1 LINE L1 -5 6161 5610 511 301 62 0 chr5 48321810 48321986 -154763546 + LTR16B LTR ERVL 1 187 -277 241 217 0 0 chr5 48321988 48322034 -154763498 + LTR16B LTR ERVL 419 464 0 2947 323 53 21 chr5 48322084 48323496 -154762036 + HERV16 LTR ERVL 78 1534 -3462 446 324 0 7 chr5 48323532 48323677 -154761855 + HERV16 LTR ERVL 1665 1808 -3188 297 224 0 0 chr5 48323791 48323849 -154761683 + LTR16B LTR ERVL 1 58 -406 751 281 63 28 chr5 48323996 48324281 -154761251 + LTR16B LTR ERVL 170 464 0 860 193 92 9 chr5 48324286 48324504 -154761028 - L1ME1 LINE L1 -572 5594 5359 633 90 0 11 chr5 48324508 48324597 -154760935 - AluS SINE Alu -225 88 1 1151 238 66 3 chr5 48324600 48324979 -154760553 - L1ME1 LINE L1 -776 5370 4968 32 43 0 0 chr5 48325118 48325164 -154760368 + AT_rich Low_complexity Low_complexity 1 46 0 684 157 0 0 chr5 48325288 48325390 -154760142 + AluS SINE Alu 1 102 -211 337 434 50 26 chr5 48325390 48325890 -154759642 + L1M2 LINE L1 20 531 -6318 746 230 89 4 chr5 48325953 48326223 -154759309 + L1M4 LINE L1 5078 5370 -776 582 151 0 0 chr5 48326228 48326314 -154759218 + AluS SINE Alu 3 88 -225 718 201 6 52 chr5 48326314 48326488 -154759044 - L1PA15-16 LINE L1 -4307 2542 2377 * 1843 215 33 79 chr5 48326485 48327308 -154758224 + L1PA15-16 LINE L1 1777 2563 -3583 1066 194 7 21 chr5 48327302 48327591 -154757941 + L1PA16 LINE L1 1856 2140 -4709 * 9851 215 19 32 chr5 48327561 48328511 -154757021 + L1PA16 LINE L1 3276 4236 -2633 189 0 0 0 chr5 48328511 48328532 -154757000 + (CAA)n Simple_repeat Simple_repeat 1 21 0 9851 215 19 32 chr5 48328532 48331208 -154754324 + L1PA16 LINE L1 4236 6853 -16 35 0 0 0 chr5 48331340 48331375 -154754157 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr5 48331584 48331638 -154753894 + AT_rich Low_complexity Low_complexity 1 54 0 2396 58 0 14 chr5 48331638 48331933 -154753599 + AluY SINE Alu 1 291 -20 1566 119 16 129 chr5 48331939 48332325 -154753207 - L1MA8 LINE L1 -5 6286 5945 357 24 0 0 chr5 48333215 48333257 -154752275 + (TG)n Simple_repeat Simple_repeat 1 42 0 474 371 78 47 chr5 48335435 48336252 -154749280 - L2 LINE L2 0 3272 2428 186 255 143 20 chr5 48336788 48336886 -154748646 - L2 LINE L2 -590 2724 2615 3780 185 64 28 chr5 48337214 48337316 -154748216 - L1MCa LINE L1 -2713 3713 3616 1589 116 4 0 chr5 48337316 48337548 -154747984 - AluSq SINE Alu 0 313 81 3780 185 64 28 chr5 48337548 48340828 -154744704 - L1MCa LINE L1 -2810 3616 29 399 249 168 0 chr5 48340837 48341010 -154744522 - Charlie7 DNA MER1_type -642 1970 1769 1231 267 79 35 chr5 48341011 48341528 -154744004 - Charlie7 DNA MER1_type -2038 574 35 1644 87 0 18 chr5 48342143 48342362 -154743170 - AluSc SINE Alu -10 299 85 230 32 0 0 chr5 48342364 48342395 -154743137 - AluSc SINE Alu -102 31 1 4562 203 28 40 chr5 48342420 48343654 -154741878 - L1 LINE L1 -2059 4087 2869 2942 182 81 22 chr5 48343657 48344348 -154741184 + L1 LINE L1 4094 4825 -1321 201 314 0 0 chr5 48344554 48344605 -154740927 - L3 LINE CR1 -24 1553 1503 22 35 0 0 chr5 48345218 48345247 -154740285 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 48345282 48345308 -154740224 + AT_rich Low_complexity Low_complexity 1 26 0 979 169 0 7 chr5 48345308 48345462 -154740070 + FRAM SINE Alu 1 152 -24 23 68 0 0 chr5 48345462 48345506 -154740026 + AT_rich Low_complexity Low_complexity 1 44 0 1764 112 8 4 chr5 48345550 48345799 -154739733 - AluSx SINE Alu -16 296 47 367 317 17 8 chr5 48346438 48346558 -154738974 + L2 LINE L2 3187 3307 -6 226 374 10 0 chr5 48346924 48347023 -154738509 - L2 LINE L2 -7 3265 3166 189 0 0 0 chr5 48347283 48347304 -154738228 + (TTG)n Simple_repeat Simple_repeat 1 21 0 197 308 13 13 chr5 48347456 48347534 -154737998 + MIR SINE MIR 148 225 -37 10413 127 10 3 chr5 48347803 48350529 -154735003 - L1MA1 LINE L1 -3 6299 3553 1536 96 0 0 chr5 48350535 48350733 -154734799 - AluSg SINE Alu -110 200 3 976 109 97 11 chr5 48350739 48350914 -154734618 + L1MC2 LINE L1 6149 6338 -6 3703 178 72 41 chr5 48351086 48351919 -154733613 - L1MC3 LINE L1 -290 7495 6637 258 302 32 79 chr5 48352068 48352194 -154733338 + MIR SINE MIR 79 198 -64 1932 133 38 22 chr5 48352549 48352925 -154732607 + Tigger3(Golem) DNA MER2_type 1 3028 -1 444 234 34 63 chr5 48353129 48353226 -154732306 - L1MC3 LINE L1 -1889 5919 5828 2100 126 3 3 chr5 48353226 48353528 -154732004 - AluSx SINE Alu -10 302 1 444 234 34 63 chr5 48353528 48353605 -154731927 - L1MC3 LINE L1 -1980 5828 5750 657 225 28 60 chr5 48353683 48353932 -154731600 - L1MC5 LINE L1 -77 7884 7644 207 102 20 82 chr5 48354167 48354216 -154731316 + (GAAAA)n Simple_repeat Simple_repeat 1 46 0 2505 59 0 0 chr5 48354533 48354836 -154730696 - AluY SINE Alu -8 303 1 2210 180 86 36 chr5 48354860 48355382 -154730150 - MER44D DNA MER2_type -1 604 2 647 258 68 60 chr5 48358398 48358544 -154726988 + MIR SINE MIR 7 157 -105 2180 87 7 7 chr5 48358544 48358843 -154726689 + AluSx SINE Alu 2 300 -12 647 258 68 60 chr5 48358843 48358948 -154726584 + MIR SINE MIR 157 260 -2 180 0 0 0 chr5 48359544 48359564 -154725968 + (TA)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr5 48359563 48359583 -154725949 + (CA)n Simple_repeat Simple_repeat 2 21 0 270 0 0 0 chr5 48359593 48359623 -154725909 + (TATG)n Simple_repeat Simple_repeat 2 31 0 329 266 64 11 chr5 48359816 48359910 -154725622 - L1MC4 LINE L1 -1328 6714 6616 644 181 9 0 chr5 48360225 48360341 -154725191 + L1PA16 LINE L1 6046 6162 -4 22 0 0 0 chr5 48360370 48360392 -154725140 + AT_rich Low_complexity Low_complexity 1 22 0 516 263 163 0 chr5 48361473 48361633 -154723899 + MER5A DNA MER1_type 4 189 0 390 308 127 11 chr5 48361706 48361982 -154723550 - L2 LINE L2 0 3313 3006 2075 120 0 27 chr5 48362066 48362367 -154723165 + AluSx SINE Alu 1 293 -19 404 277 20 0 chr5 48363194 48363295 -154722237 + MIR SINE MIR 47 149 -113 1452 282 56 41 chr5 48363405 48363758 -154721774 - MLT1H LTR MaLR 0 549 184 3517 141 15 0 chr5 48363758 48364277 -154721255 - MER1A DNA MER1_type 0 527 1 1452 282 56 41 chr5 48364277 48364462 -154721070 - MLT1H LTR MaLR -365 184 3 3328 62 14 2 chr5 48364773 48365207 -154720325 + L1PA7 LINE L1 5715 6153 -1 264 100 0 0 chr5 48366166 48366206 -154719326 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 67 0 0 chr5 48368033 48368078 -154717454 + AT_rich Low_complexity Low_complexity 1 45 0 686 193 88 58 chr5 48368560 48368678 -154716854 - MER45A DNA AcHobo -1405 176 50 1749 173 33 44 chr5 48368678 48369043 -154716489 + MLT1A1 LTR MaLR 5 365 0 686 193 88 58 chr5 48369043 48369095 -154716437 - MER45A DNA AcHobo -1531 50 1 27 0 0 0 chr5 48370394 48370421 -154715111 + AT_rich Low_complexity Low_complexity 1 27 0 2295 66 7 0 chr5 48370421 48370724 -154714808 - L1PA5 LINE L1 -3 6151 5847 5568 38 7 1 chr5 48370824 48371979 -154713553 - L1PA5 LINE L1 -287 5867 4706 1513 304 41 4 chr5 48372758 48373271 -154712261 - MLT1H1 LTR MaLR 0 555 24 429 366 100 32 chr5 48373298 48373678 -154711854 - L2 LINE L2 0 3272 2867 1329 163 10 120 chr5 48373684 48374006 -154711526 - MLT2B3 LTR ERVL -223 292 1 211 189 0 0 chr5 48374085 48374122 -154711410 + CT-rich Low_complexity Low_complexity 2 38 0 30 0 0 0 chr5 48374186 48374216 -154711316 + AT_rich Low_complexity Low_complexity 1 30 0 34131 30 13 2 chr5 48374216 48380247 -154705285 - L1PA2 LINE L1 -3 6152 1 372 255 180 70 chr5 48380249 48380449 -154705083 + MIR SINE MIR 41 262 0 1147 168 77 142 chr5 48380596 48381013 -154704519 - MLT1B LTR MaLR 0 390 1 246 324 12 14 chr5 48381028 48381132 -154704400 - L1ME LINE L1 -509 5661 5556 903 247 46 5 chr5 48381161 48381380 -154704152 + LTR16A LTR ERVL 199 426 -24 22 35 0 0 chr5 48381601 48381630 -154703902 + AT_rich Low_complexity Low_complexity 1 29 0 1486 171 74 0 chr5 48383221 48383490 -154702042 - AluJb SINE Alu -23 289 1 377 350 65 48 chr5 48383492 48384078 -154701454 + L1M4 LINE L1 2679 3274 -2872 2412 86 0 0 chr5 48384804 48385105 -154700427 - AluY SINE Alu -10 301 1 354 45 0 0 chr5 48386658 48386702 -154698830 + (GA)n Simple_repeat Simple_repeat 1 44 0 256 175 70 0 chr5 48386840 48386897 -154698635 + MLT1K LTR MaLR 512 572 -16 1688 330 59 31 chr5 48387106 48387901 -154697631 + ERVL LTR ERVL 2902 3718 -2046 190 310 161 0 chr5 48388122 48388209 -154697323 + L2 LINE L2 3197 3297 -16 1092 232 24 4 chr5 48389136 48389386 -154696146 + MIR SINE MIR 3 257 -5 583 261 96 27 chr5 48389450 48389638 -154695894 - MER63A DNA MER1_type 0 210 10 322 317 49 38 chr5 48389861 48390044 -154695488 + MIR SINE MIR 28 212 -50 434 248 98 0 chr5 48390927 48391060 -154694472 + MER103 DNA DNA 21 166 0 238 364 45 40 chr5 48391174 48391372 -154694160 - L2 LINE L2 -184 3088 2890 2201 99 0 10 chr5 48393726 48394028 -154691504 + AluSc SINE Alu 1 299 -10 21 57 0 0 chr5 48396666 48396701 -154688831 + AT_rich Low_complexity Low_complexity 1 35 0 1271 163 63 63 chr5 48397622 48397922 -154687610 - AluJo SINE Alu -12 300 1 301 317 103 78 chr5 48398284 48398357 -154687175 - MIR SINE MIR 0 262 192 1098 219 33 5 chr5 48398357 48398572 -154686960 + MER58A DNA MER1_type 4 224 0 301 317 103 78 chr5 48398572 48398748 -154686784 - MIR SINE MIR -70 192 4 317 301 96 19 chr5 48399052 48399208 -154686324 - Charlie8 DNA MER1_type -2143 274 107 27 29 0 0 chr5 48400159 48400193 -154685339 + AT_rich Low_complexity Low_complexity 1 34 0 478 257 18 9 chr5 48400570 48400683 -154684849 + MER81 DNA DNA 1 114 0 2205 93 21 0 chr5 48400738 48401029 -154684503 + AluSx SINE Alu 1 297 -15 37 23 0 0 chr5 48402050 48402094 -154683438 + AT_rich Low_complexity Low_complexity 1 44 0 214 29 57 0 chr5 48402898 48402933 -154682599 + (TA)n Simple_repeat Simple_repeat 1 37 0 300 268 0 21 chr5 48405343 48405440 -154680092 + L1 LINE L1 4932 5026 -1120 15628 89 27 22 chr5 48407000 48409416 -154676116 - L1P LINE L1 -3254 2892 464 710 193 34 40 chr5 48409524 48409700 -154675832 + L1MDa LINE L1 223 397 -6143 342 262 16 66 chr5 48409693 48409782 -154675750 - L1MDa LINE L1 -6327 213 130 * 1854 89 75 7 chr5 48409782 48410063 -154675469 - AluSg SINE Alu -10 300 1 342 262 16 66 chr5 48410063 48410095 -154675437 - L1MDa LINE L1 -6410 130 98 256 289 197 3 chr5 48410074 48410399 -154675133 - L1MEc LINE L1 -4137 2584 2197 * 2201 108 3 10 chr5 48410663 48410968 -154674564 - AluSg SINE Alu -7 303 1 1187 127 0 0 chr5 48410976 48411142 -154674390 - AluSg/x SINE Alu -17 295 130 1519 87 143 255 chr5 48411142 48411750 -154673782 + LTR12 LTR ERV1 2 541 -173 213 39 0 0 chr5 48412093 48412119 -154673413 + (T)n Simple_repeat Simple_repeat 1 26 0 8666 117 37 72 chr5 48412159 48413790 -154671742 + MER4A-int LTR ERV1 5023 6597 -1 1872 135 138 39 chr5 48413795 48413931 -154671601 + MER4A LTR ERV1 1 122 -542 2168 121 3 0 chr5 48413931 48414228 -154671304 + AluSp SINE Alu 1 298 -15 1872 135 138 39 chr5 48414228 48414642 -154670890 + MER4A LTR ERV1 122 664 0 1583 220 94 13 chr5 48414642 48415015 -154670517 - MSTB LTR MaLR -23 403 1 3256 166 16 14 chr5 48415015 48415047 -154670485 + LTR26 LTR ERV1 50 80 -523 1926 181 77 48 chr5 48415047 48415462 -154670070 - MSTA LTR MaLR 0 428 2 3256 166 16 14 chr5 48415462 48415982 -154669550 + LTR26 LTR ERV1 80 603 0 835 266 0 30 chr5 48415982 48416245 -154669287 - AluJo SINE Alu -57 255 1 206 298 36 24 chr5 48416897 48416981 -154668551 - MIR SINE MIR -140 122 38 2442 69 3 0 chr5 48417082 48417385 -154668147 + AluY SINE Alu 1 304 -7 3076 167 12 112 chr5 48417790 48418274 -154667258 + LTR26 LTR ERV1 1 532 -71 1713 115 50 57 chr5 48418274 48418553 -154666979 + AluSg SINE Alu 1 277 -33 216 0 0 0 chr5 48418555 48418579 -154666953 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3076 167 12 112 chr5 48418579 48418760 -154666772 + LTR26 LTR ERV1 533 602 -1 198 0 0 0 chr5 48418795 48418817 -154666715 + (T)n Simple_repeat Simple_repeat 1 22 0 3361 70 11 16 chr5 48418990 48419432 -154666100 - SVA Other Other -3 1383 944 7722 48 11 4 chr5 48419458 48420968 -154664564 - SVA Other Other -799 1383 20 696 153 105 43 chr5 48421026 48421263 -154664269 - LTR49-int LTR ERV1 -2450 3881 3653 1541 184 17 24 chr5 48421263 48421551 -154663981 + AluJo SINE Alu 1 286 -26 2184 110 0 0 chr5 48421613 48421904 -154663628 - AluSx SINE Alu -17 295 5 1252 185 20 73 chr5 48421971 48422016 -154663516 - LTR49-int LTR ERV1 -2741 3590 3544 1814 179 3 31 chr5 48422016 48422334 -154663198 - AluJb SINE Alu -3 309 1 1252 185 20 73 chr5 48422334 48422590 -154662942 - LTR49-int LTR ERV1 -2787 3544 3305 871 144 46 52 chr5 48422608 48422781 -154662751 - LTR49-int LTR ERV1 -4662 1669 1498 5510 155 32 43 chr5 48423038 48424557 -154660975 - LTR49-int LTR ERV1 -4465 1481 1 979 186 50 27 chr5 48424559 48424780 -154660752 - LTR49 LTR ERV1 0 595 370 906 163 13 0 chr5 48424755 48424908 -154660624 - LTR49 LTR ERV1 -437 158 4 * 1405 179 125 66 chr5 48425020 48425460 -154660072 - MER31B LTR ERV1 0 466 1 2796 122 72 75 chr5 48426100 48426224 -154659308 + LTR64 LTR ERVK 3 126 -432 2144 112 7 0 chr5 48426224 48426541 -154658991 + AluSx SINE Alu 1 319 0 2796 122 72 75 chr5 48426541 48426608 -154658924 + LTR64 LTR ERVK 126 192 -366 2172 99 0 0 chr5 48426608 48426914 -154658618 + AluSq SINE Alu 1 306 0 2796 122 72 75 chr5 48426914 48427275 -154658257 + LTR64 LTR ERVK 192 558 0 2273 179 41 19 chr5 48427276 48427740 -154657792 + MER67A LTR ERV1 1 474 -69 4933 174 29 8 chr5 48429420 48430281 -154655251 + MER49 LTR ERV1 1 881 -42 668 169 0 73 chr5 48430290 48430426 -154655106 + AluSq/x SINE Alu 7 132 -181 2061 158 0 3 chr5 48430435 48430745 -154654787 + AluJb SINE Alu 3 311 -1 208 355 65 16 chr5 48430867 48430991 -154654541 - L2 LINE L2 -7 3265 3136 2260 103 0 31 chr5 48431137 48431457 -154654075 + AluSq SINE Alu 1 310 -3 584 241 9 0 chr5 48432095 48432211 -154653321 - MSTB LTR MaLR -255 171 55 2271 87 14 0 chr5 48432220 48432425 -154653107 - AluY SINE Alu 0 311 122 261 0 0 0 chr5 48432425 48432454 -154653078 + (TG)n Simple_repeat Simple_repeat 2 30 0 2271 87 14 0 chr5 48432454 48432578 -154652954 - AluY SINE Alu -189 122 1 813 129 0 8 chr5 48432578 48432702 -154652830 - FLAM_C SINE Alu -12 131 9 326 113 0 19 chr5 48432710 48432763 -154652769 - MSTB LTR MaLR -374 52 1 2367 97 0 0 chr5 48432936 48433236 -154652296 + AluY SINE Alu 1 300 -11 357 173 0 0 chr5 48433250 48433302 -154652230 + Alu SINE Alu 2 53 -249 2468 84 0 0 chr5 48434021 48434329 -154651203 + AluSg SINE Alu 1 308 -2 282 98 0 0 chr5 48434334 48434378 -154651154 + AluSg SINE Alu 1 36 -264 2469 81 0 3 chr5 48435301 48435610 -154649922 + AluY SINE Alu 1 308 -3 21 0 0 0 chr5 48435896 48435917 -154649615 + GC_rich Low_complexity Low_complexity 1 21 0 591 163 0 0 chr5 48435927 48436025 -154649507 - AluJ/FLAM SINE Alu -213 99 2 2155 74 0 15 chr5 48436906 48437175 -154648357 + AluSg SINE Alu 24 288 -22 266 260 41 0 chr5 48438302 48438375 -154647157 - L2 LINE L2 -10 3262 3187 2302 88 0 3 chr5 48438686 48438983 -154646549 - AluY SINE Alu -15 296 1 23 0 0 0 chr5 48439251 48439274 -154646258 + AT_rich Low_complexity Low_complexity 1 23 0 2271 88 17 0 chr5 48439990 48440284 -154645248 - AluSp SINE Alu -14 299 1 2447 86 7 0 chr5 48440416 48440718 -154644814 - AluSg SINE Alu -6 304 1 2166 105 3 0 chr5 48441071 48441356 -154644176 + AluSx SINE Alu 1 286 -26 450 265 56 28 chr5 48441363 48441612 -154643920 + L1MEd LINE L1 1005 1260 -4945 * 3864 228 60 45 chr5 48441607 48442193 -154643339 - L1MDa LINE L1 -4691 1849 1274 2298 90 3 13 chr5 48442193 48442492 -154643040 + AluY SINE Alu 1 296 -15 3864 228 60 45 chr5 48442492 48443136 -154642396 - L1MDa LINE L1 -5266 1274 600 1424 180 54 4 chr5 48443144 48443405 -154642127 - AluSx SINE Alu -38 274 1 1747 240 33 26 chr5 48443409 48443715 -154641817 - L1MDa LINE L1 -6107 433 122 1958 109 64 0 chr5 48443715 48443998 -154641534 - AluSx SINE Alu -11 301 1 1747 240 33 26 chr5 48443998 48444120 -154641412 - L1MDa LINE L1 -6418 122 2 2162 98 3 17 chr5 48444130 48444261 -154641271 + AluSg SINE Alu 1 132 -178 5987 90 38 2 chr5 48444261 48445059 -154640473 - LTR12 LTR ERV1 0 826 1 2162 98 3 17 chr5 48445059 48445224 -154640308 + AluSg SINE Alu 132 293 -17 2174 96 17 10 chr5 48445232 48445533 -154639999 + AluSg SINE Alu 1 303 -7 277 282 196 6 chr5 48445797 48446123 -154639409 + L1MEd LINE L1 1872 2259 -4137 2332 82 0 16 chr5 48446134 48446440 -154639092 + AluSg SINE Alu 1 301 -9 238 250 26 0 chr5 48446450 48446526 -154639006 - L2 LINE L2 -1182 2132 2055 2201 92 18 0 chr5 48447192 48447476 -154638056 - AluSg SINE Alu -21 289 1 356 352 190 0 chr5 48447534 48447750 -154637782 - MIR SINE MIR 0 262 6 1584 254 82 15 chr5 48448121 48448653 -154636879 + MLT1F1 LTR MaLR 1 567 0 222 342 0 51 chr5 48448697 48448814 -154636718 + L2 LINE L2 1355 1465 -1849 363 257 98 102 chr5 48448847 48449234 -154636298 + L2 LINE L2 1603 1989 -1325 2258 94 27 0 chr5 48449234 48449532 -154636000 - AluSp SINE Alu -7 306 1 363 257 98 102 chr5 48449532 48449665 -154635867 + L2 LINE L2 1989 2121 -1193 270 231 0 138 chr5 48449718 48449848 -154635684 - MER102a DNA MER1_type -1 329 218 1091 116 7 7 chr5 48449957 48450112 -154635420 + AluSq SINE Alu 1 155 -158 23 54 0 0 chr5 48450118 48450155 -154635377 + AT_rich Low_complexity Low_complexity 1 37 0 2024 86 90 4 chr5 48450161 48450439 -154635093 - AluY SINE Alu -8 303 2 2478 75 0 0 chr5 48450442 48450735 -154634797 - AluSg SINE Alu -7 303 11 431 300 123 74 chr5 48450799 48451157 -154634375 + L2 LINE L2 2173 2567 -747 1848 149 24 7 chr5 48451157 48451452 -154634080 - AluJb SINE Alu -12 300 1 431 300 123 74 chr5 48451452 48451620 -154633912 + L2 LINE L2 2567 2725 -589 748 114 8 23 chr5 48451800 48451931 -154633601 - FLAM_C SINE Alu -4 129 1 247 301 146 0 chr5 48452047 48452150 -154633382 + L2 LINE L2 3187 3304 -9 2213 95 3 0 chr5 48452335 48452630 -154632902 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 48452806 48452828 -154632704 + GC_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr5 48454142 48454165 -154631367 + (T)n Simple_repeat Simple_repeat 1 23 0 676 101 0 10 chr5 48455876 48455975 -154629557 + FLAM_A SINE Alu 4 101 -41 243 0 0 0 chr5 48455981 48456008 -154629524 + (TTTTC)n Simple_repeat Simple_repeat 1 27 0 183 250 117 0 chr5 48456037 48456097 -154629435 - MIR SINE MIR -123 139 73 280 320 163 20 chr5 48456562 48456715 -154628817 + MIR SINE MIR 74 248 -14 1303 164 0 23 chr5 48456721 48456941 -154628591 + AluJo SINE Alu 85 299 -13 682 213 56 6 chr5 48457191 48457351 -154628181 - AluJb SINE Alu -11 301 134 1923 114 7 7 chr5 48457391 48457662 -154627870 + AluSq SINE Alu 1 271 -42 1861 154 0 24 chr5 48457710 48458008 -154627524 + AluJb SINE Alu 2 292 -20 725 215 125 5 chr5 48458105 48458305 -154627227 - MER58A DNA MER1_type 0 224 1 483 196 138 20 chr5 48458356 48458530 -154627002 - L1MA10 LINE L1 -2 6332 5983 1908 96 73 0 chr5 48458618 48458890 -154626642 + AluSx SINE Alu 2 293 -19 424 129 0 0 chr5 48458891 48458953 -154626579 + AluS SINE Alu 2 63 -255 2245 206 49 11 chr5 48458962 48459497 -154626035 - L1ME1 LINE L1 -310 5856 5302 1962 231 40 38 chr5 48459511 48460017 -154625515 - LTR40a LTR ERVL -5 514 8 352 299 10 10 chr5 48460027 48460124 -154625408 - HERVL40 LTR ERVL -9 5521 5425 2220 110 7 7 chr5 48460125 48460426 -154625106 + AluSx SINE Alu 1 301 -11 289 168 103 0 chr5 48460551 48460658 -154624874 + MER51-int LTR ERV1 2281 2398 -5418 * 1137 81 25 128 chr5 48460652 48460786 -154624746 + MER51-int LTR ERV1 2808 2954 -4862 2795 7 0 3 chr5 48460786 48461089 -154624443 - AluYa5 SINE Alu -9 302 1 1137 81 25 128 chr5 48461089 48461108 -154624424 + MER51-int LTR ERV1 2954 2973 -4843 2036 97 17 30 chr5 48461108 48461406 -154624126 - AluSp SINE Alu -11 302 9 1137 81 25 128 chr5 48461406 48461486 -154624046 + MER51-int LTR ERV1 2973 3018 -4798 649 48 39 29 chr5 48461492 48461596 -154623936 + MER57-int LTR ERV1 4899 5003 -2534 575 121 10 20 chr5 48461597 48461696 -154623836 + MER57-int LTR ERV1 5250 5347 -2190 2272 99 7 3 chr5 48462252 48462554 -154622978 + AluSx SINE Alu 10 312 0 2408 73 0 22 chr5 48462824 48463137 -154622395 - AluSp SINE Alu -7 306 1 2231 114 0 3 chr5 48463138 48463436 -154622096 - AluSx SINE Alu -15 297 1 2189 103 7 3 chr5 48463452 48463744 -154621788 - AluSx SINE Alu -19 293 1 323 224 0 47 chr5 48464261 48464346 -154621186 + MIR SINE MIR 161 241 -21 224 307 79 0 chr5 48464663 48464764 -154620768 - MIR SINE MIR -65 143 35 2245 116 0 7 chr5 48464773 48465083 -154620449 - AluSx SINE Alu -4 308 1 2063 120 10 7 chr5 48465454 48465755 -154619777 + AluSq SINE Alu 1 302 -11 994 54 78 0 chr5 48465965 48466094 -154619438 + MER85 DNA T2_type 1 139 0 6922 182 55 53 chr5 48466094 48466958 -154618574 + L1MB1 LINE L1 3429 4290 -1878 2271 93 16 10 chr5 48466958 48467269 -154618263 - AluSq SINE Alu 0 313 1 2339 69 14 0 chr5 48467279 48467567 -154617965 - AluSp SINE Alu -21 292 1 6922 182 55 53 chr5 48467567 48467739 -154617793 + L1MB1 LINE L1 4298 4468 -1700 1695 118 118 18 chr5 48467739 48468011 -154617521 + AluSx SINE Alu 1 299 -13 6922 182 55 53 chr5 48468011 48468072 -154617460 + L1MB1 LINE L1 4468 4527 -1641 1134 156 85 31 chr5 48468072 48468110 -154617422 + MER46A DNA MER2_type 1 36 -2695 1949 140 21 0 chr5 48468110 48468396 -154617136 + AluSg SINE Alu 2 293 -17 1134 156 85 31 chr5 48468396 48468581 -154616951 + MER46A DNA MER2_type 36 236 0 6922 182 55 53 chr5 48468581 48468751 -154616781 + L1MB1 LINE L1 4527 4695 -1473 1435 127 110 101 chr5 48468751 48469059 -154616473 - AluY SINE Alu 0 311 1 6922 182 55 53 chr5 48469059 48470519 -154615013 + L1MB1 LINE L1 4695 6166 -2 2127 112 17 0 chr5 48470646 48470940 -154614592 + AluSp SINE Alu 1 299 -14 1716 162 3 30 chr5 48472208 48472511 -154613021 + AluJb SINE Alu 1 295 -17 817 278 43 24 chr5 48472565 48472820 -154612712 + MIR SINE MIR 2 261 -1 2092 122 0 7 chr5 48472981 48473288 -154612244 - AluSx SINE Alu 0 305 1 214 290 97 0 chr5 48473426 48473488 -154612044 + L2 LINE L2 3205 3272 0 1854 141 10 10 chr5 48473755 48474052 -154611480 + AluJb SINE Alu 1 297 -15 416 250 32 24 chr5 48474205 48474329 -154611203 - L1M4 LINE L1 -5377 1165 1041 2193 72 4 11 chr5 48474329 48474608 -154610924 + AluSg1 SINE Alu 1 277 -32 1789 95 11 23 chr5 48474608 48474872 -154610660 - AluSq SINE Alu -52 261 1 1934 147 0 14 chr5 48474972 48475264 -154610268 - AluJb SINE Alu -24 288 1 2249 88 10 7 chr5 48475295 48475589 -154609943 - AluSc SINE Alu -14 295 1 1547 248 54 73 chr5 48475795 48476171 -154609361 - L1M4 LINE L1 -5575 967 585 2551 80 0 0 chr5 48476171 48476482 -154609050 - AluY SINE Alu 0 311 1 1877 134 79 3 chr5 48476484 48476775 -154608757 - AluSq SINE Alu 0 313 1 1547 248 54 73 chr5 48476775 48476972 -154608560 - L1M4 LINE L1 -5958 584 402 209 264 0 0 chr5 48477005 48477058 -154608474 + MIR SINE MIR 184 236 -26 226 292 33 42 chr5 48477066 48477186 -154608346 + L2 LINE L2 2937 3055 -217 2156 112 3 20 chr5 48477615 48477920 -154607612 + AluSx SINE Alu 1 300 -12 659 269 119 13 chr5 48478095 48478322 -154607210 + HsTC2 DNA Tc2 186 436 -1462 2423 58 3 29 chr5 48478551 48478861 -154606671 + AluY SINE Alu 1 302 -9 2081 121 18 0 chr5 48478870 48479150 -154606382 + AluSx SINE Alu 1 285 -27 186 43 0 0 chr5 48479150 48479173 -154606359 + (TA)n Simple_repeat Simple_repeat 1 23 0 1187 236 143 21 chr5 48479185 48479618 -154605914 - L1ME1 LINE L1 -95 6071 5586 1880 127 15 4 chr5 48479643 48479911 -154605621 + AluSq SINE Alu 1 271 -42 1757 152 10 27 chr5 48479959 48480255 -154605277 + AluJb SINE Alu 2 292 -20 725 215 125 5 chr5 48480352 48480552 -154604980 - MER58A DNA MER1_type 0 224 1 483 196 138 20 chr5 48480603 48480777 -154604755 - L1MA10 LINE L1 -2 6332 5983 1995 95 66 0 chr5 48480865 48481139 -154604393 + AluSx SINE Alu 2 293 -19 337 253 27 0 chr5 48481139 48481214 -154604318 + AluS SINE Alu 1 77 -222 2235 204 49 11 chr5 48481214 48481744 -154603788 - L1ME1 LINE L1 -315 5851 5302 1962 231 40 38 chr5 48481758 48482264 -154603268 - LTR40a LTR ERVL -5 514 8 758 207 4 134 chr5 48482274 48482375 -154603157 - HERVL40 LTR ERVL -9 5521 5408 2075 108 52 7 chr5 48482375 48482661 -154602871 + AluSq SINE Alu 1 299 -14 758 207 4 134 chr5 48482661 48482834 -154602698 - HERVL40 LTR ERVL -122 5408 5283 285 309 25 0 chr5 48482832 48482913 -154602619 - HERVL40 LTR ERVL -172 2865 2783 * 279 349 47 41 chr5 48482913 48483175 -154602357 - MER89-int LTR ERV1 -345 6455 6111 1815 145 11 0 chr5 48483294 48483600 -154601932 - AluSx SINE Alu 0 309 1 322 263 105 48 chr5 48483645 48483854 -154601678 - HERVL40 LTR ERVL -327 2710 2490 1938 140 11 0 chr5 48483865 48484168 -154601364 - AluSx SINE Alu 0 306 1 5657 236 70 51 chr5 48484367 48484470 -154601062 - HERVL40 LTR ERVL -693 4678 4578 1846 174 0 10 chr5 48484470 48484775 -154600757 - AluJb SINE Alu -10 302 1 5657 236 70 51 chr5 48484775 48485208 -154600324 - HERVL40 LTR ERVL -793 4578 4155 1943 118 12 59 chr5 48485208 48485529 -154600003 + AluSq SINE Alu 1 306 -7 5657 236 70 51 chr5 48485529 48485998 -154599534 - HERVL40 LTR ERVL -1216 4155 3696 2243 108 0 7 chr5 48485998 48486295 -154599237 + AluSx SINE Alu 5 299 -13 5657 236 70 51 chr5 48486295 48486986 -154598546 - HERVL40 LTR ERVL -1675 3696 2044 3218 241 49 31 chr5 48487025 48487899 -154597633 - HERVL40 LTR ERVL -2595 2935 2046 2662 260 60 59 chr5 48488037 48488620 -154596912 - HERVL40 LTR ERVL -4073 1457 876 867 114 0 79 chr5 48488620 48488760 -154596772 + FLAM_C SINE Alu 1 129 -4 2662 260 60 59 chr5 48488760 48489492 -154596040 - HERVL40 LTR ERVL -4654 876 174 1427 216 50 89 chr5 48489494 48489841 -154595691 - MLT1C LTR MaLR -4 463 104 2008 113 14 0 chr5 48489841 48490125 -154595407 - AluSp SINE Alu -22 291 4 1427 216 50 89 chr5 48490125 48490140 -154595392 - MLT1C LTR MaLR -363 104 90 2472 84 7 0 chr5 48490140 48490450 -154595082 - AluSp SINE Alu -1 312 1 1427 216 50 89 chr5 48490450 48490568 -154594964 - MLT1C LTR MaLR -377 90 1 701 251 6 24 chr5 48490568 48490735 -154594797 - HERVL40 LTR ERVL -5350 180 17 1554 254 133 13 chr5 48490744 48491204 -154594328 - LTR40a LTR ERVL -4 515 1 1431 203 99 85 chr5 48491224 48491272 -154594260 - L1M4 LINE L1 -852 5294 5248 2352 99 0 3 chr5 48491272 48491586 -154593946 + AluSq SINE Alu 1 313 0 1431 203 99 85 chr5 48491586 48491753 -154593779 - L1M4 LINE L1 -898 5248 5085 2535 73 0 6 chr5 48491753 48492066 -154593466 + AluY SINE Alu 1 311 0 1431 203 99 85 chr5 48492066 48492081 -154593451 - L1M4 LINE L1 -1061 5085 5072 1690 185 11 0 chr5 48492081 48492351 -154593181 + AluJb SINE Alu 1 273 -39 1431 203 99 85 chr5 48492351 48492539 -154592993 - L1M4 LINE L1 -1074 5072 4888 2346 96 10 0 chr5 48492539 48492840 -154592692 - AluSp SINE Alu -9 304 1 1431 203 99 85 chr5 48492840 48493005 -154592527 - L1M4 LINE L1 -1258 4888 4700 1219 93 4 93 chr5 48494288 48494546 -154590986 + AluSg/x SINE Alu 70 304 -8 728 223 211 59 chr5 48494554 48494895 -154590637 + L2 LINE L2 1799 2191 -1123 725 217 45 0 chr5 48494925 48495082 -154590450 - LTR16C LTR ERVL -1 490 327 732 289 55 17 chr5 48495121 48495356 -154590176 - LTR16C LTR ERVL -244 247 4 1529 229 72 7 chr5 48495367 48495782 -154589750 + L2 LINE L2 2313 2754 -560 325 301 85 2 chr5 48495855 48496093 -154589439 + L2 LINE L2 2768 3069 -244 1459 137 0 0 chr5 48496129 48496378 -154589154 - AluSc SINE Alu 0 323 75 2356 60 3 16 chr5 48496495 48496809 -154588723 - AluY SINE Alu -1 310 1 657 195 143 17 chr5 48496810 48497041 -154588491 - HAL1b LINE L1 -246 1102 843 422 224 79 40 chr5 48497089 48497241 -154588291 + L1MEd LINE L1 990 1147 -4972 434 155 42 0 chr5 48497260 48497331 -154588201 + MLT1A2 LTR MaLR 1 74 -300 801 267 4 25 chr5 48497857 48498097 -154587435 + MIR SINE MIR 2 236 -26 383 208 17 92 chr5 48498251 48498371 -154587161 + MIR3 SINE MIR 46 156 -52 205 333 16 24 chr5 48499519 48499645 -154585887 + (CGTG)n Simple_repeat Simple_repeat 1 125 0 338 216 0 40 chr5 48500136 48500261 -154585271 + CT-rich Low_complexity Low_complexity 1 120 0 826 128 0 0 chr5 48501614 48501739 -154583793 - FLAM_A SINE Alu 0 142 18 1914 151 0 10 chr5 48502240 48502539 -154582993 + AluJb SINE Alu 6 301 -11 2369 62 0 24 chr5 48503205 48503525 -154582007 + AluY SINE Alu 1 313 0 490 181 45 53 chr5 48503543 48503632 -154581900 - HAL1 LINE L1 -103 2404 2315 1804 166 0 45 chr5 48503632 48503945 -154581587 - AluJo SINE Alu -13 299 1 490 181 45 53 chr5 48503945 48503988 -154581544 - HAL1 LINE L1 -192 2315 2273 1731 152 16 54 chr5 48503989 48504304 -154581228 - AluJo SINE Alu -9 303 1 1177 40 23 17 chr5 48504991 48505168 -154580364 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 507 233 0 0 chr5 48505169 48505319 -154580213 + CT-rich Low_complexity Low_complexity 4 153 0 523 300 50 22 chr5 48505588 48505768 -154579764 + MIR SINE MIR 23 207 -55 2455 100 3 0 chr5 48505768 48506078 -154579454 + AluSp SINE Alu 1 311 -2 209 95 0 24 chr5 48506078 48506120 -154579412 + (TA)n Simple_repeat Simple_repeat 1 41 0 312 241 148 108 chr5 48506243 48506567 -154578965 - MLT1J LTR MaLR -65 446 110 507 158 40 164 chr5 48506675 48506751 -154578781 - MER94 DNA DNA 0 134 85 2074 95 32 14 chr5 48506751 48507034 -154578498 - AluSx SINE Alu -24 288 1 507 158 40 164 chr5 48507034 48507109 -154578423 - MER94 DNA DNA -49 85 2 2317 74 0 0 chr5 48507156 48507461 -154578071 - AluY SINE Alu 0 305 1 2047 130 0 3 chr5 48507705 48508004 -154577528 + AluSg SINE Alu 1 298 -12 2286 81 0 0 chr5 48508005 48508288 -154577244 + AluY SINE Alu 17 299 -12 2321 82 0 51 chr5 48508540 48508856 -154576676 + AluSc SINE Alu 1 300 -9 832 225 0 18 chr5 48509042 48509211 -154576321 - FRAM SINE Alu 0 166 1 2610 141 13 0 chr5 48510112 48510510 -154575022 + MER57A LTR ERV1 1 403 0 2091 92 0 7 chr5 48510606 48510877 -154574655 + AluSq SINE Alu 1 269 -44 428 243 12 35 chr5 48511024 48511193 -154574339 + GA-rich Low_complexity Low_complexity 4 168 0 1912 146 36 0 chr5 48511711 48512012 -154573520 + AluJb SINE Alu 1 312 0 444 281 96 22 chr5 48512196 48512374 -154573158 + MIR SINE MIR 61 251 -11 766 186 8 8 chr5 48512460 48512589 -154572943 + FLAM_C SINE Alu 3 131 -12 2317 75 0 0 chr5 48512694 48512999 -154572533 - AluY SINE Alu 0 305 1 1657 138 85 14 chr5 48513226 48513509 -154572023 + AluJo SINE Alu 2 304 -8 25 31 0 0 chr5 48514912 48514944 -154570588 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 48515092 48515113 -154570419 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2374 104 3 0 chr5 48515311 48515620 -154569912 + AluSg SINE Alu 1 310 0 2108 128 13 7 chr5 48516598 48516903 -154568629 - AluSx SINE Alu -5 307 1 387 105 0 0 chr5 48517146 48517203 -154568329 + (GGGGA)n Simple_repeat Simple_repeat 4 60 0 296 250 152 0 chr5 48517349 48517441 -154568091 - L2 LINE L2 0 3313 3208 2262 136 149 102 chr5 48517676 48517877 -154567655 - LTR29 LTR ERV1 -5 617 427 2166 135 0 3 chr5 48517877 48518188 -154567344 + AluSx SINE Alu 1 310 -2 2262 136 149 102 chr5 48518188 48518575 -154566957 - LTR29 LTR ERV1 -195 427 1 295 336 67 57 chr5 48518618 48518901 -154566631 - L2 LINE L2 -424 2890 2605 408 50 0 81 chr5 48520136 48520235 -154565297 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 984 158 16 22 chr5 48520277 48520461 -154565071 - AluSp SINE Alu 0 313 131 2145 66 7 35 chr5 48520464 48520795 -154564737 - AluSg SINE Alu 0 323 1 1227 204 58 0 chr5 48521637 48521862 -154563670 - MER8 DNA MER2_type 0 239 2 1496 126 0 0 chr5 48522483 48522682 -154562850 - AluJb SINE Alu -27 285 87 751 167 83 7 chr5 48522738 48522882 -154562650 - MLT1B LTR MaLR -46 344 190 7985 151 50 21 chr5 48522903 48523885 -154561647 - Tigger1 DNA MER2_type -944 1474 522 2377 85 3 0 chr5 48523885 48524179 -154561353 - AluY SINE Alu -16 295 1 2263 72 0 17 chr5 48524186 48524476 -154561056 - AluSg1 SINE Alu -22 287 3 7985 151 50 21 chr5 48524476 48524913 -154560619 - Tigger1 DNA MER2_type -1901 517 5 2607 134 47 0 chr5 48525372 48525781 -154559751 - MSTC LTR MaLR 0 428 1 261 254 142 16 chr5 48526613 48526791 -154558741 + MIR SINE MIR 19 216 -46 664 255 104 62 chr5 48527128 48527308 -154558224 - L1MC/D LINE L1 -2000 5808 5612 1955 103 0 4 chr5 48527308 48527569 -154557963 - AluSg SINE Alu -10 300 41 664 255 104 62 chr5 48527569 48527647 -154557885 - L1MC/D LINE L1 -2196 5612 5539 2213 105 3 10 chr5 48528160 48528456 -154557076 - AluSg SINE Alu -15 295 2 2178 102 0 29 chr5 48528458 48528771 -154556761 - AluSx SINE Alu -8 304 1 395 152 15 15 chr5 48528958 48529024 -154556508 + AluSq/x SINE Alu 45 110 -193 527 87 0 0 chr5 48529024 48529093 -154556439 + AluSp/q SINE Alu 226 294 -19 2037 137 10 0 chr5 48529143 48529443 -154556089 - AluSx SINE Alu -9 303 1 720 130 89 49 chr5 48529448 48529571 -154555961 - FLAM_C SINE Alu -5 128 1 242 329 133 24 chr5 48529684 48529861 -154555671 + L2 LINE L2 2032 2247 -1067 2247 95 14 3 chr5 48529861 48530156 -154555376 + AluSx SINE Alu 1 298 -14 242 329 133 24 chr5 48530156 48530233 -154555299 + L2 LINE L2 2247 2314 -1000 219 365 0 0 chr5 48530434 48530497 -154555035 + L2 LINE L2 3192 3254 -18 25 0 0 0 chr5 48530641 48530666 -154554866 + AT_rich Low_complexity Low_complexity 1 25 0 2276 102 0 0 chr5 48531469 48531763 -154553769 + AluSq SINE Alu 1 294 -19 180 0 0 0 chr5 48533242 48533262 -154552270 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 48533552 48533580 -154551952 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 48534365 48534386 -154551146 + AT_rich Low_complexity Low_complexity 1 21 0 1553 231 138 81 chr5 48535054 48535750 -154549782 - MER21B LTR ERV1 -109 754 18 2160 114 7 0 chr5 48535750 48536049 -154549483 - AluSp SINE Alu -12 301 1 2102 107 3 7 chr5 48536207 48536532 -154549000 + AluSg SINE Alu 1 310 0 1396 181 57 7 chr5 48537343 48537625 -154547907 - AluJo SINE Alu -16 296 1 316 169 169 0 chr5 48538114 48538179 -154547353 - MER5A DNA MER1_type -1 188 113 2811 96 39 0 chr5 48538179 48538542 -154546990 - MER51B LTR ERV1 0 377 1 10974 127 83 46 chr5 48538544 48538815 -154546717 - MER51B-int LTR ERV1 -1 7815 7555 2458 84 0 7 chr5 48538815 48539124 -154546408 + AluSq SINE Alu 1 307 -6 10974 127 83 46 chr5 48539124 48539196 -154546336 - MER51B-int LTR ERV1 -261 7555 7487 2498 69 0 7 chr5 48539196 48539501 -154546031 + AluSg SINE Alu 1 303 -7 10974 127 83 46 chr5 48539501 48539817 -154545715 - MER51B-int LTR ERV1 -329 7487 7184 2304 99 0 10 chr5 48539817 48540131 -154545401 - AluSx SINE Alu -1 311 1 10974 127 83 46 chr5 48540131 48540394 -154545138 - MER51B-int LTR ERV1 -632 7184 6932 2358 66 0 44 chr5 48540394 48540713 -154544819 - AluY SINE Alu -6 305 1 10974 127 83 46 chr5 48540713 48540870 -154544662 - MER51B-int LTR ERV1 -884 6932 6782 2077 102 6 38 chr5 48540870 48541183 -154544349 + AluSq SINE Alu 1 303 -10 10974 127 83 46 chr5 48541183 48541411 -154544121 - MER51B-int LTR ERV1 -1034 6782 6564 2253 102 0 16 chr5 48541411 48541715 -154543817 - AluSx SINE Alu -13 299 1 10974 127 83 46 chr5 48541715 48542254 -154543278 - MER51B-int LTR ERV1 -1252 6564 6046 2179 67 42 3 chr5 48542254 48542538 -154542994 + AluY SINE Alu 1 295 -16 10974 127 83 46 chr5 48542538 48542906 -154542626 - MER51B-int LTR ERV1 -1770 6046 5693 2217 130 0 0 chr5 48542906 48543207 -154542325 - AluSg SINE Alu -9 301 1 10974 127 83 46 chr5 48543207 48543319 -154542213 - MER51B-int LTR ERV1 -2123 5693 5250 750 50 40 0 chr5 48543320 48543421 -154542111 - MER51-int LTR ERV1 -2534 5003 4899 1214 93 33 47 chr5 48543427 48543499 -154542033 - MER51-int LTR ERV1 -4798 3018 2947 2211 91 13 16 chr5 48543499 48543806 -154541726 + AluSp SINE Alu 1 306 -7 1214 93 33 47 chr5 48543806 48543947 -154541585 - MER51-int LTR ERV1 -4869 2947 2808 3603 98 3 36 chr5 48543961 48544194 -154541338 - MER51-int LTR ERV1 -5439 2377 2138 2288 78 0 10 chr5 48544194 48544503 -154541029 - AluY SINE Alu -5 306 1 3603 98 3 36 chr5 48544503 48544743 -154540789 - MER51-int LTR ERV1 -5678 2138 1926 2404 70 3 22 chr5 48544743 48545057 -154540475 - AluY SINE Alu -3 308 1 3603 98 3 36 chr5 48545057 48545185 -154540347 - MER51-int LTR ERV1 -5890 1926 1795 1993 94 45 4 chr5 48545185 48545480 -154540052 - AluSc SINE Alu 0 306 1 1046 88 0 22 chr5 48545480 48545616 -154539916 - AluSc SINE Alu -176 133 1 672 150 80 25 chr5 48545626 48545813 -154539719 - MER4A LTR ERV1 -133 531 276 357 253 20 30 chr5 48545816 48545915 -154539617 - MER4A LTR ERV1 -566 98 1 1251 107 5 25 chr5 48545915 48546111 -154539421 - LOR1-int LTR ERV1 -6901 1219 1028 2848 72 8 11 chr5 48546111 48546487 -154539045 + L1PA5 LINE L1 5779 6153 -1 1112 81 7 7 chr5 48546488 48546637 -154538895 + AluY SINE Alu 1 149 -162 874 108 102 13 chr5 48546652 48546809 -154538723 + AluY SINE Alu 32 202 -109 696 45 18 18 chr5 48547345 48547455 -154538077 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 486 46 0 0 chr5 48547462 48547527 -154538005 + (TTCTG)n Simple_repeat Simple_repeat 2 66 0 1851 139 4 14 chr5 48547531 48547676 -154537856 - AluSx SINE Alu -35 277 135 2153 104 3 7 chr5 48547676 48547975 -154537557 - AluSx SINE Alu -14 298 1 1851 139 4 14 chr5 48547975 48548109 -154537423 - AluSx SINE Alu -177 135 1 778 145 73 0 chr5 48548109 48548289 -154537243 - FLAM_C SINE Alu 0 189 1 2645 45 7 3 chr5 48548719 48549028 -154536504 + AluY SINE Alu 2 311 0 21 0 0 0 chr5 48549091 48549112 -154536420 + AT_rich Low_complexity Low_complexity 1 21 0 1872 156 7 0 chr5 48549622 48549917 -154535615 - AluSx SINE Alu -15 297 1 309 353 8 0 chr5 48550751 48550873 -154534659 + MIR3 SINE MIR 86 208 0 3062 140 24 8 chr5 48551141 48551641 -154533891 - L1MB8 LINE L1 -2 6176 5669 1296 156 69 0 chr5 48551661 48551892 -154533640 - L1MB8 LINE L1 -615 5569 5323 2273 100 10 0 chr5 48551892 48552192 -154533340 - AluSx SINE Alu -7 305 3 2230 105 3 0 chr5 48552199 48552493 -154533039 - AluSx SINE Alu -17 295 1 1913 181 43 19 chr5 48552519 48552890 -154532642 - MSTB LTR MaLR 0 426 47 604 194 47 0 chr5 48552892 48553021 -154532511 - FRAM SINE Alu -2 174 40 2276 121 12 3 chr5 48553054 48553386 -154532146 + THE1C LTR MaLR 1 335 -40 453 216 78 20 chr5 48553404 48553506 -154532026 + AluSg/x SINE Alu 76 183 -129 377 65 0 0 chr5 48553514 48553560 -154531972 + THE1C LTR MaLR 330 375 0 897 179 0 19 chr5 48553560 48553722 -154531810 - AluJo SINE Alu -153 159 1 426 73 0 0 chr5 48553722 48553777 -154531755 - MSTB LTR MaLR -371 55 1 1370 215 13 62 chr5 48553792 48553910 -154531622 - L1MB8 LINE L1 -851 5295 5173 2285 89 0 7 chr5 48553910 48554202 -154531330 - AluSg SINE Alu -20 290 1 1370 215 13 62 chr5 48554202 48554469 -154531063 - L1MB8 LINE L1 -973 5173 4929 2042 115 45 0 chr5 48554471 48554758 -154530774 - AluSx SINE Alu -12 300 1 292 308 58 6 chr5 48554788 48554944 -154530588 - L1M4c LINE L1 -4165 2219 2056 230 270 63 45 chr5 48555105 48555216 -154530316 + L2 LINE L2 3199 3311 -2 1820 137 95 0 chr5 48555370 48555655 -154529877 + AluSx SINE Alu 1 312 0 2467 143 21 0 chr5 48555667 48556051 -154529481 - MER57A LTR ERV1 -4 399 8 410 235 143 0 chr5 48556062 48556160 -154529372 + L2 LINE L2 3160 3271 -1 1811 159 6 25 chr5 48556623 48556938 -154528594 + AluJo SINE Alu 1 309 -3 2366 86 0 3 chr5 48557036 48557337 -154528195 + AluSg SINE Alu 2 301 -9 520 247 119 58 chr5 48557372 48557615 -154527917 + MIR SINE MIR 5 262 0 896 104 0 15 chr5 48558244 48558379 -154527153 - FLAM_C SINE Alu 0 133 1 866 66 16 16 chr5 48558512 48558633 -154526899 + AluSp/q SINE Alu 179 299 -14 1794 123 39 54 chr5 48558752 48558871 -154526661 - LTR56 LTR ERV1 0 445 326 2135 125 0 0 chr5 48558871 48559168 -154526364 - AluSg1 SINE Alu -12 297 1 1794 123 39 54 chr5 48559168 48559380 -154526152 - LTR56 LTR ERV1 -119 326 119 447 133 0 0 chr5 48559386 48559461 -154526071 + Alu SINE Alu 235 309 -3 573 129 89 20 chr5 48559464 48559565 -154525967 - LTR56 LTR ERV1 -329 116 9 1777 249 95 55 chr5 48559981 48560737 -154524795 - L2 LINE L2 -81 3191 2349 228 246 9 70 chr5 48561182 48561247 -154524285 + MIR SINE MIR 141 198 -64 2307 94 7 0 chr5 48561247 48561555 -154523977 + AluSx SINE Alu 3 312 0 228 246 9 70 chr5 48561555 48561603 -154523929 + MIR SINE MIR 198 247 -15 26 0 0 0 chr5 48561857 48561883 -154523649 + AT_rich Low_complexity Low_complexity 1 26 0 489 300 35 0 chr5 48562016 48562186 -154523346 - MIR3 SINE MIR -1 207 32 2459 65 0 0 chr5 48562319 48562612 -154522920 - AluY SINE Alu -18 293 1 1657 175 3 24 chr5 48562711 48563002 -154522530 + AluJb SINE Alu 3 287 -25 2198 108 3 10 chr5 48563266 48563572 -154521960 + AluSq SINE Alu 1 304 -9 2233 105 10 22 chr5 48563784 48564098 -154521434 - AluSg SINE Alu 0 310 1 1229 266 63 37 chr5 48564289 48564717 -154520815 - MLT1J LTR MaLR -19 492 50 670 231 40 17 chr5 48564717 48564890 -154520642 + MER5B DNA MER1_type 2 178 0 1229 266 63 37 chr5 48564890 48564924 -154520608 - MLT1J LTR MaLR -461 50 18 903 239 0 55 chr5 48565202 48565495 -154520037 + AluJo SINE Alu 1 277 -35 23 54 0 0 chr5 48565775 48565812 -154519720 + AT_rich Low_complexity Low_complexity 1 37 0 188 311 49 16 chr5 48568352 48568413 -154517119 + MIR SINE MIR 117 179 -83 354 23 0 0 chr5 48568418 48568461 -154517071 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 319 263 8 38 chr5 48568553 48568686 -154516846 - L1MC5 LINE L1 -33 7928 7800 685 160 0 0 chr5 48568691 48568791 -154516741 + AluS SINE Alu 2 101 -211 2139 129 7 0 chr5 48568815 48569118 -154516414 - AluSx SINE Alu -7 305 1 1735 214 28 56 chr5 48570105 48570618 -154514914 - L1ME3A LINE L1 -4 6166 5667 1724 198 0 3 chr5 48570618 48570916 -154514616 - AluJo SINE Alu -15 297 1 1735 214 28 56 chr5 48570916 48570940 -154514592 - L1ME3A LINE L1 -503 5667 5644 5835 127 24 27 chr5 48570953 48572261 -154513271 - L1PB3 LINE L1 -3 6151 4844 485 214 27 0 chr5 48572283 48572395 -154513137 - L1PB3 LINE L1 -1878 4268 4154 245 231 154 0 chr5 48573338 48573403 -154512129 + MIR3 SINE MIR 89 163 -45 674 246 52 11 chr5 48573405 48573742 -154511790 - MER113 DNA MER1_type? 0 521 106 555 310 140 0 chr5 48573751 48573980 -154511552 - MIR SINE MIR 0 262 2 451 330 34 4 chr5 48574318 48574554 -154510978 + L1ME LINE L1 5576 5818 -303 209 194 45 0 chr5 48574562 48574629 -154510903 + (TA)n Simple_repeat Simple_repeat 1 70 0 2475 70 3 0 chr5 48574700 48575000 -154510532 + AluY SINE Alu 1 301 -10 234 258 68 45 chr5 48575495 48575627 -154509905 - L1ME LINE L1 -346 5775 5641 606 237 8 23 chr5 48575733 48575864 -154509668 + FLAM_A SINE Alu 1 129 -4 2200 104 3 14 chr5 48576640 48576937 -154508595 + AluSg SINE Alu 1 294 -16 1041 157 3 141 chr5 48577482 48577781 -154507751 - L1 LINE L1 -2056 4090 3833 16775 54 3 6 chr5 48577807 48581429 -154504103 - L1PA5 LINE L1 -3 6151 2555 845 186 0 18 chr5 48582935 48583102 -154502430 + AluJb SINE Alu 149 312 0 372 217 0 0 chr5 48583160 48583220 -154502312 - AluS SINE Alu -243 60 1 2274 112 0 0 chr5 48583663 48583958 -154501574 + AluSq SINE Alu 2 296 -17 21 100 0 0 chr5 48585047 48585117 -154500415 + AT_rich Low_complexity Low_complexity 1 70 0 2164 100 3 35 chr5 48585126 48585445 -154500087 + AluSc SINE Alu 1 309 0 895 265 88 23 chr5 48585459 48585810 -154499722 + L1MC/D LINE L1 5302 5675 -2133 2109 107 31 7 chr5 48585926 48586216 -154499316 + AluSx SINE Alu 1 297 -15 1858 164 16 19 chr5 48586387 48586699 -154498833 + AluJb SINE Alu 1 311 -1 1864 96 8 8 chr5 48586975 48587225 -154498307 + AluSq SINE Alu 42 291 -22 2256 93 7 10 chr5 48587226 48587528 -154498004 + AluSq SINE Alu 4 304 -9 1111 114 120 3 chr5 48588373 48588681 -154496851 + SVA Other Other 523 866 -520 6168 78 15 45 chr5 48588695 48589678 -154495854 + SVA Other Other 433 1386 0 249 175 0 0 chr5 48589836 48589876 -154495656 + MER58A DNA MER1_type 42 81 -26 180 0 0 0 chr5 48589876 48589896 -154495636 + (A)n Simple_repeat Simple_repeat 1 20 0 9724 134 55 68 chr5 48589905 48590464 -154495068 + LTR49-int LTR ERV1 3886 4451 -1880 1983 118 7 26 chr5 48590464 48590768 -154494764 - AluY SINE Alu -13 298 1 9724 134 55 68 chr5 48590768 48591230 -154494302 + LTR49-int LTR ERV1 4451 4917 -1414 2292 110 3 0 chr5 48591230 48591530 -154494002 + AluSc SINE Alu 2 302 -7 9724 134 55 68 chr5 48591530 48592057 -154493475 + LTR49-int LTR ERV1 4917 5449 -882 2374 99 0 0 chr5 48592057 48592359 -154493173 + AluSx SINE Alu 1 302 -10 9724 134 55 68 chr5 48592359 48592532 -154493000 + LTR49-int LTR ERV1 5449 5623 -708 2555 72 0 0 chr5 48592532 48592836 -154492696 + AluY SINE Alu 1 304 -7 9724 134 55 68 chr5 48592836 48593097 -154492435 + LTR49-int LTR ERV1 5623 5846 -485 1289 203 13 51 chr5 48593100 48593411 -154492121 + MER4A LTR ERV1 4 302 -362 244 30 0 0 chr5 48593411 48593444 -154492088 + L1PA15 LINE L1 6127 6159 -6 838 222 0 18 chr5 48593544 48593715 -154491817 - FRAM SINE Alu -4 172 5 1497 131 131 41 chr5 48594349 48594663 -154490869 + MER4A LTR ERV1 1 342 -322 615 97 258 8 chr5 48594718 48594842 -154490690 + MER4C LTR ERV1 291 445 -20 528 313 37 31 chr5 48594867 48595161 -154490371 - L1ME3A LINE L1 -264 5906 5611 493 235 34 34 chr5 48595833 48595952 -154489580 - FLAM_A SINE Alu -14 119 1 1899 104 4 4 chr5 48595967 48596227 -154489305 - AluSx SINE Alu -21 291 32 373 125 0 0 chr5 48596267 48596323 -154489209 + Alu SINE Alu 245 300 -2 468 146 12 0 chr5 48596342 48596424 -154489108 - LTR23 LTR ERV1 -195 242 160 2376 90 0 3 chr5 48596501 48596801 -154488731 - AluSq SINE Alu -14 299 1 790 199 0 19 chr5 48596821 48596977 -154488555 - FRAM SINE Alu -4 172 20 719 174 65 7 chr5 48597000 48597138 -154488394 - LTR23 LTR ERV1 -291 146 1 2352 51 0 51 chr5 48597264 48597429 -154488103 - AluY SINE Alu -15 296 153 2336 56 7 10 chr5 48597429 48597731 -154487801 - AluY SINE Alu -10 301 1 2352 51 0 51 chr5 48597731 48597877 -154487655 - AluY SINE Alu -158 153 1 349 247 121 35 chr5 48597880 48598054 -154487478 - MER34 LTR ERV1 -50 492 304 552 178 102 170 chr5 48598082 48598191 -154487341 - MER34C LTR ERV1 -227 358 243 4704 175 22 39 chr5 48598191 48599176 -154486356 + LTR5 LTR ERVK 1 969 0 552 178 102 170 chr5 48599176 48599326 -154486206 - MER34C LTR ERV1 -342 243 125 2006 124 3 56 chr5 48599326 48599649 -154485883 - AluSx SINE Alu -6 306 1 552 178 102 170 chr5 48599649 48599730 -154485802 - MER34C LTR ERV1 -460 125 40 195 204 0 0 chr5 48600170 48600224 -154485308 + CT-rich Low_complexity Low_complexity 3 56 0 2394 117 32 59 chr5 48600523 48600932 -154484600 + MER48 LTR ERV1 1 398 0 17242 102 38 19 chr5 48600932 48603511 -154482021 + HERVH48 LTR ERV1 1 2628 -4026 2307 82 3 0 chr5 48603567 48603858 -154481674 + AluSp SINE Alu 1 292 -21 2254 97 16 10 chr5 48603868 48604179 -154481353 + AluSq SINE Alu 1 313 0 3802 197 59 10 chr5 48604179 48605043 -154480489 - L1 LINE L1 -1812 4334 3429 994 54 78 0 chr5 48605043 48605172 -154480360 - MER85 DNA T2_type 0 139 1 2063 120 10 7 chr5 48605381 48605682 -154479850 - AluSq SINE Alu -11 302 1 2242 114 0 7 chr5 48606053 48606360 -154479172 + AluSx SINE Alu 1 305 -7 224 307 79 0 chr5 48606369 48606470 -154479062 + MIR SINE MIR 35 143 -65 323 224 0 47 chr5 48606787 48606872 -154478660 - MIR SINE MIR -21 241 161 2189 103 7 3 chr5 48607390 48607682 -154477850 + AluSx SINE Alu 1 293 -19 2231 114 0 3 chr5 48607698 48607996 -154477536 + AluSx SINE Alu 1 297 -15 2408 73 0 22 chr5 48607997 48608310 -154477222 + AluSp SINE Alu 1 306 -7 2261 100 10 6 chr5 48608582 48608893 -154476639 - AluSx SINE Alu 0 312 1 368 250 86 21 chr5 48608905 48608922 -154476610 + MER46C DNA MER2_type 46 60 -278 2276 103 0 10 chr5 48608922 48609223 -154476309 + AluSg SINE Alu 1 298 -12 368 250 86 21 chr5 48609223 48609345 -154476187 + MER46C DNA MER2_type 60 194 -144 245 203 101 29 chr5 48609378 48609447 -154476085 + MER46C DNA MER2_type 264 337 -1 1291 164 34 127 chr5 48609506 48609642 -154475890 + AluJo SINE Alu 1 91 -211 1971 127 3 20 chr5 48609642 48609934 -154475598 + AluSx SINE Alu 1 287 -25 1291 164 34 127 chr5 48609934 48610120 -154475412 + AluJo SINE Alu 91 293 -9 2514 60 3 7 chr5 48610202 48610504 -154475028 - AluY SINE Alu -10 301 1 444 257 34 62 chr5 48611327 48611488 -154474044 - MER5A DNA MER1_type 0 189 34 341 267 48 48 chr5 48611488 48611653 -154473879 - MER5B DNA MER1_type -1 177 13 693 310 52 29 chr5 48611683 48611993 -154473539 + L1MDa LINE L1 11 327 -6213 320 245 88 125 chr5 48612488 48612704 -154472828 + L1MDa LINE L1 911 1110 -5420 194 355 0 16 chr5 48612711 48612773 -154472759 - MIR SINE MIR -110 98 38 2382 73 7 3 chr5 48613078 48613380 -154472152 - AluSp SINE Alu -10 303 1 2453 50 6 53 chr5 48613389 48613712 -154471820 - AluY SINE Alu -3 308 1 36241 64 9 12 chr5 48615680 48617150 -154468382 - L1PA6 LINE L1 -6 6148 4674 4918 159 28 36 chr5 48617150 48618127 -154467405 - LTR5 LTR ERVK 0 969 1 36241 64 9 12 chr5 48618127 48618244 -154467288 - L1PA6 LINE L1 -1480 4674 4558 2498 70 0 7 chr5 48618244 48618546 -154466986 + AluY SINE Alu 1 300 -11 36241 64 9 12 chr5 48618546 48622602 -154462930 - L1PA6 LINE L1 -1596 4558 13 1587 196 97 20 chr5 48623237 48623639 -154461893 - MER39 LTR ERV1 0 707 275 3833 181 63 105 chr5 48623763 48623901 -154461631 - MER31-int LTR ERV1 -168 6163 6021 2276 101 20 0 chr5 48623901 48624197 -154461335 + AluSp SINE Alu 1 302 -11 3833 181 63 105 chr5 48624197 48624563 -154460969 - MER31-int LTR ERV1 -310 6021 5641 1994 147 3 0 chr5 48624563 48624856 -154460676 - AluSx SINE Alu -18 294 1 1642 197 3 3 chr5 48624857 48625156 -154460376 - AluJb SINE Alu -13 299 1 3833 181 63 105 chr5 48625156 48625667 -154459865 - MER31-int LTR ERV1 -689 5642 3880 483 237 151 13 chr5 48626257 48626409 -154459123 - MER69A DNA AcHobo -4 173 1 3775 80 75 14 chr5 48626445 48627006 -154458526 - LTR61 LTR ERV1 0 595 1 698 254 48 54 chr5 48627446 48627777 -154457755 + L1M4 LINE L1 3703 4031 -2115 1090 136 92 0 chr5 48627784 48627990 -154457542 + LTR49 LTR ERV1 1 225 -370 565 168 224 51 chr5 48627987 48628183 -154457349 + LTR29 LTR ERV1 389 618 -4 * 2028 130 38 12 chr5 48628189 48628535 -154456997 + LTR29-int LTR ERV1 1 355 -5976 1768 131 57 20 chr5 48628585 48628883 -154456649 - AluSx SINE Alu -3 309 1 1220 210 98 18 chr5 48628886 48629162 -154456370 - AluJo SINE Alu -14 298 1 331 167 36 71 chr5 48629164 48629248 -154456284 - MER34C LTR ERV1 -492 93 13 302 0 26 0 chr5 48629326 48629364 -154456168 + (CA)n Simple_repeat Simple_repeat 1 39 0 2020 150 0 10 chr5 48629819 48630133 -154455399 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr5 48630123 48630149 -154455383 + AT_rich Low_complexity Low_complexity 1 26 0 321 221 29 86 chr5 48630240 48630380 -154455152 + MER104 DNA Tc2 5 136 -44 1375 201 3 63 chr5 48630423 48630742 -154454790 - AluJb SINE Alu -4 308 9 834 68 0 17 chr5 48632001 48632119 -154453413 + AluJ SINE Alu 4 119 -183 336 280 86 72 chr5 48632129 48632489 -154453043 - L1MCa LINE L1 -4217 2209 1907 807 177 85 0 chr5 48632509 48632673 -154452859 + AluJ SINE Alu 121 298 -14 304 245 69 108 chr5 48634850 48635054 -154450478 - L1 LINE L1 -2885 3261 3066 308 309 125 51 chr5 48636754 48637090 -154448442 - L1 LINE L1 -2981 3165 2805 1374 196 39 0 chr5 48637269 48637555 -154447977 + AluJb SINE Alu 1 297 -15 1523 184 57 13 chr5 48639262 48639444 -154446088 - AluJo SINE Alu 0 312 110 426 39 0 0 chr5 48639444 48639496 -154446036 + (TG)n Simple_repeat Simple_repeat 1 52 0 1523 184 57 13 chr5 48639496 48639612 -154445920 - AluJo SINE Alu -202 110 1 344 320 31 8 chr5 48639707 48639835 -154445697 - LTR33 LTR ERVL -373 148 18 1824 173 7 7 chr5 48639884 48640191 -154445341 - AluSx SINE Alu -5 307 1 2215 274 47 36 chr5 48640221 48641162 -154444370 + L1M4 LINE L1 3356 4306 -1840 731 158 0 0 chr5 48642658 48642798 -154442734 - AluSp/q SINE Alu 0 325 186 1174 64 56 56 chr5 48642803 48643036 -154442496 + AluY SINE Alu 5 237 -74 1264 185 128 64 chr5 48643580 48644018 -154441514 + MER31B LTR ERV1 1 466 0 885 175 7 0 chr5 48644130 48644284 -154441248 + LTR49 LTR ERV1 4 158 -437 869 183 59 27 chr5 48644259 48644478 -154441054 + LTR49 LTR ERV1 370 595 0 * 4641 158 51 45 chr5 48644479 48645966 -154439566 + LTR49-int LTR ERV1 1 1481 -4465 1115 147 199 36 chr5 48646092 48646343 -154439189 + LTR49-int LTR ERV1 1378 1669 -4662 1132 207 15 74 chr5 48646361 48646617 -154438915 + LTR49-int LTR ERV1 3305 3540 -2791 1874 177 3 31 chr5 48646617 48646934 -154438598 + AluJb SINE Alu 1 308 -4 1132 207 15 74 chr5 48646934 48647001 -154438531 + LTR49-int LTR ERV1 3540 3609 -2722 622 171 98 65 chr5 48646995 48647046 -154438486 + LTR49-int LTR ERV1 3569 3617 -3186 * 2230 112 0 22 chr5 48647046 48647360 -154438172 + AluSx SINE Alu 5 311 -1 622 171 98 65 chr5 48647360 48647400 -154438132 + LTR49-int LTR ERV1 3617 3654 -3149 1582 184 17 24 chr5 48647400 48647688 -154437844 - AluJo SINE Alu -26 286 1 622 171 98 65 chr5 48647688 48647925 -154437607 + LTR49-int LTR ERV1 3654 4353 -2450 5697 86 31 15 chr5 48647954 48648805 -154436727 + SVA Other Other 3 866 -520 6342 72 22 48 chr5 48648833 48650410 -154435122 + SVA Other Other 508 1386 0 236 175 0 0 chr5 48650569 48650609 -154434923 + MER58A DNA MER1_type 42 81 -26 198 0 0 0 chr5 48650609 48650631 -154434901 + (A)n Simple_repeat Simple_repeat 1 22 0 9088 136 55 66 chr5 48650640 48651199 -154434333 + LTR49-int LTR ERV1 3886 4450 -1881 2001 118 7 26 chr5 48651199 48651503 -154434029 - AluY SINE Alu -13 298 1 9088 136 55 66 chr5 48651503 48651965 -154433567 + LTR49-int LTR ERV1 4450 4916 -1415 2363 102 3 0 chr5 48651965 48652268 -154433264 + AluSc SINE Alu 2 305 -4 9088 136 55 66 chr5 48652268 48652792 -154432740 + LTR49-int LTR ERV1 4916 5444 -887 2401 99 0 0 chr5 48652792 48653095 -154432437 + AluSx SINE Alu 1 303 -9 9088 136 55 66 chr5 48653095 48653268 -154432264 + LTR49-int LTR ERV1 5444 5617 -714 2569 72 0 0 chr5 48653268 48653572 -154431960 + AluY SINE Alu 1 304 -7 9088 136 55 66 chr5 48653572 48653833 -154431699 + LTR49-int LTR ERV1 5617 5846 -485 1205 203 13 51 chr5 48653836 48654147 -154431385 + MER4A LTR ERV1 4 302 -362 232 30 0 0 chr5 48654147 48654180 -154431352 + L1PA15 LINE L1 6127 6159 -6 860 211 0 19 chr5 48654280 48654441 -154431091 - FRAM SINE Alu -4 172 15 1405 131 131 41 chr5 48655085 48655399 -154430133 + MER4A LTR ERV1 1 342 -322 570 105 258 8 chr5 48655454 48655578 -154429954 + MER4C LTR ERV1 291 445 -20 468 320 34 27 chr5 48655603 48655897 -154429635 - L1ME3A LINE L1 -264 5906 5611 521 235 34 34 chr5 48656569 48656688 -154428844 - FLAM_A SINE Alu -14 119 1 1845 111 8 4 chr5 48656700 48656962 -154428570 - AluSx SINE Alu -18 294 32 355 125 0 0 chr5 48657002 48657058 -154428474 + Alu SINE Alu 243 298 -2 439 146 12 0 chr5 48657077 48657159 -154428373 - LTR23 LTR ERV1 -195 242 160 2393 90 0 3 chr5 48657236 48657536 -154427996 - AluSq SINE Alu -14 299 1 802 201 0 19 chr5 48657553 48657712 -154427820 - FRAM SINE Alu -1 175 20 678 191 52 7 chr5 48657735 48657871 -154427661 - LTR23 LTR ERV1 -291 146 5 2360 51 0 51 chr5 48657999 48658163 -154427369 - AluY SINE Alu -15 296 154 2366 50 10 13 chr5 48658163 48658465 -154427067 - AluY SINE Alu -10 301 1 2360 51 0 51 chr5 48658465 48658612 -154426920 - AluY SINE Alu -157 154 1 457 213 78 153 chr5 48658615 48658926 -154426606 - MER34C LTR ERV1 -50 492 159 4913 177 21 38 chr5 48658926 48659911 -154425621 + LTR5 LTR ERVK 1 969 0 457 213 78 153 chr5 48659911 48660060 -154425472 - MER34C LTR ERV1 -383 159 90 2103 115 3 56 chr5 48660060 48660383 -154425149 - AluSx SINE Alu -6 306 1 457 213 78 153 chr5 48660383 48660467 -154425065 - MER34C LTR ERV1 -452 90 1 223 362 78 9 chr5 48660591 48660809 -154424723 + L2 LINE L2 2109 2341 -973 207 204 0 0 chr5 48660904 48660958 -154424574 + CT-rich Low_complexity Low_complexity 3 56 0 2457 117 32 59 chr5 48661257 48661666 -154423866 + MER48 LTR ERV1 1 398 0 16720 100 37 12 chr5 48661666 48664220 -154421312 + HERVH48 LTR ERV1 1 2618 -4036 435 167 36 167 chr5 48664220 48664285 -154421247 + LTR8A LTR ERV1 535 607 -120 2426 79 3 16 chr5 48664285 48664600 -154420932 + AluSp SINE Alu 1 311 -2 435 167 36 167 chr5 48664600 48664756 -154420776 + LTR8A LTR ERV1 607 727 0 2289 94 0 0 chr5 48664853 48665140 -154420392 + AluY SINE Alu 6 292 -19 2398 225 106 84 chr5 48665194 48666286 -154419246 - LTR28 LTR ERV1 -3 1726 1 1406 97 41 11 chr5 48666366 48666633 -154418899 + AluY SINE Alu 1 311 0 271 207 27 99 chr5 48666634 48666745 -154418787 + MER34 LTR ERV1 438 540 -2 1808 63 0 18 chr5 48666866 48667087 -154418445 - AluY SINE Alu -10 301 85 1121 70 0 0 chr5 48667087 48667215 -154418317 - AluY SINE Alu -183 128 1 2156 128 3 0 chr5 48667359 48667648 -154417884 + AluSx SINE Alu 1 290 -22 1993 110 82 25 chr5 48667820 48668175 -154417357 - THE1C LTR MaLR 0 375 1 1517 161 0 4 chr5 48670794 48671048 -154414484 - AluSg SINE Alu -4 306 54 32 0 0 0 chr5 48671629 48671661 -154413871 + AT_rich Low_complexity Low_complexity 1 32 0 1538 170 18 45 chr5 48672240 48672279 -154413253 - MER61D LTR ERV1 0 501 462 189 0 0 0 chr5 48672279 48672300 -154413232 + (TTG)n Simple_repeat Simple_repeat 2 22 0 2275 85 0 0 chr5 48672302 48672584 -154412948 - AluSx SINE Alu -30 282 1 1538 170 18 45 chr5 48672584 48672952 -154412580 - MER61D LTR ERV1 -40 461 3 1943 90 62 31 chr5 48673570 48674037 -154411495 - AluSp SINE Alu 0 313 1 2442 50 6 50 chr5 48674046 48674365 -154411167 - AluY SINE Alu -6 305 1 7113 65 12 27 chr5 48676333 48677818 -154407714 - L1PA6 LINE L1 -6 6148 4674 4985 160 29 36 chr5 48677818 48678779 -154406753 - LTR5 LTR ERVK -15 954 1 7113 65 12 27 chr5 48678779 48678845 -154406687 - L1PA6 LINE L1 -1480 4674 4609 13416 111 14 24 chr5 48728915 48730965 -154354567 - L1P LINE L1 -3898 2248 220 6274 50 3 1 chr5 48731065 48732068 -154353464 + L1P2 LINE L1 4597 5600 -555 635 37 12 0 chr5 48732068 48732150 -154353382 + L1PA2 LINE L1 6073 6155 0 * 8003 35 0 0 chr5 48732148 48733152 -154352380 + L1PA4 LINE L1 5152 6155 0 776 216 28 38 chr5 48734575 48734788 -154350744 + MER112 DNA MER1_type 1 211 -49 196 281 24 132 chr5 48735017 48735184 -154350348 + L2 LINE L2 2932 3080 -192 1899 158 6 19 chr5 48735401 48735717 -154349815 - AluJo SINE Alu 0 312 1 343 171 0 29 chr5 48736296 48736366 -154349166 + LTR33A LTR ERVL 439 506 -17 261 0 0 0 chr5 48736522 48736551 -154348981 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2487 70 0 3 chr5 48736556 48736857 -154348675 - AluY SINE Alu -11 300 1 23105 59 5 1 chr5 48737030 48740423 -154345109 + L1PA6 LINE L1 2434 5837 -317 2207 117 3 0 chr5 48740556 48740854 -154344678 - AluSx SINE Alu -13 299 1 278 199 88 88 chr5 48741645 48741781 -154343751 - MIR SINE MIR -7 255 120 702 283 103 32 chr5 48743439 48743778 -154341754 - L2 LINE L2 0 3313 2951 376 245 102 27 chr5 48743778 48743925 -154341607 - LTR16C LTR ERVL -1 490 333 665 118 18 0 chr5 48743987 48744097 -154341435 + L1 LINE L1 3645 3756 -2390 243 217 0 0 chr5 48744279 48744325 -154341207 + L2 LINE L2 3262 3307 -6 280 222 0 0 chr5 48744464 48744518 -154341014 + MER96 DNA MER1_type? 16 69 -106 247 288 55 25 chr5 48745396 48745559 -154339973 - L1ME4a LINE L1 -4 6117 5950 571 318 41 0 chr5 48745729 48745924 -154339608 - L1ME4a LINE L1 -426 5695 5493 2271 149 59 55 chr5 48746200 48746251 -154339281 - MSTB LTR MaLR 0 426 377 2125 105 24 3 chr5 48746251 48746547 -154338985 - AluSg SINE Alu -8 302 1 2271 149 59 55 chr5 48746547 48746917 -154338615 - MSTB LTR MaLR -49 377 3 201 176 0 0 chr5 48748099 48748133 -154337399 + CT-rich Low_complexity Low_complexity 1 34 0 333 0 0 0 chr5 48748134 48748171 -154337361 + (TG)n Simple_repeat Simple_repeat 1 37 0 252 0 0 0 chr5 48748170 48748198 -154337334 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 444 115 21 21 chr5 48748297 48748393 -154337139 + CT-rich Low_complexity Low_complexity 4 99 0 213 232 0 80 chr5 48748676 48748801 -154336731 + A-rich Low_complexity Low_complexity 5 119 0 304 203 180 8 chr5 48748939 48749067 -154336465 + L1MCa LINE L1 1151 1300 -5126 328 184 55 73 chr5 48749973 48750082 -154335450 + MIR SINE MIR 112 218 -44 1871 154 0 13 chr5 48750940 48751239 -154334293 - AluJb SINE Alu -15 297 3 232 228 35 0 chr5 48751950 48752007 -154333525 + L2 LINE L2 2995 3053 -219 24 0 0 0 chr5 48752329 48752353 -154333179 + AT_rich Low_complexity Low_complexity 1 24 0 375 135 0 0 chr5 48752353 48752405 -154333127 - MER66B LTR ERV1 -140 346 295 2151 106 23 17 chr5 48752744 48753045 -154332487 + AluSx SINE Alu 1 303 -9 254 304 136 41 chr5 48754227 48754457 -154331075 - L2 LINE L2 -367 2947 2668 2172 114 0 23 chr5 48754457 48754765 -154330767 + AluSg SINE Alu 1 301 -9 254 304 136 41 chr5 48754765 48754903 -154330629 - L2 LINE L2 -646 2668 2544 819 263 47 24 chr5 48755033 48755288 -154330244 - Charlie8 DNA MER1_type -2136 281 21 612 276 134 0 chr5 48755338 48755577 -154329955 - LTR33 LTR ERVL -250 271 1 2810 198 51 2 chr5 48755845 48756435 -154329097 + L1MD2 LINE L1 5702 6320 -39 282 162 99 54 chr5 48756435 48756546 -154328986 - Charlie7 DNA MER1_type -38 2574 2459 425 226 0 12 chr5 48756556 48756640 -154328892 - Charlie7 DNA MER1_type -2512 100 18 294 231 13 26 chr5 48756876 48756954 -154328578 - L2 LINE L2 -560 2754 2678 190 229 229 17 chr5 48757012 48757130 -154328402 - L2 LINE L2 -774 2540 2398 1756 282 89 17 chr5 48757132 48757728 -154327804 + L2 LINE L2 1033 1671 -1643 2462 191 62 25 chr5 48757752 48758050 -154327482 + L1PBa LINE L1 2443 2729 -4133 2543 62 0 7 chr5 48758050 48758358 -154327174 + AluY SINE Alu 1 306 -5 2462 191 62 25 chr5 48758358 48758634 -154326898 + L1PBa LINE L1 2729 3035 -3827 2172 109 6 10 chr5 48758634 48758946 -154326586 - AluSq SINE Alu 0 313 3 2462 191 62 25 chr5 48758946 48759031 -154326501 + L1PBa LINE L1 3035 3115 -3747 3437 125 22 31 chr5 48759031 48759617 -154325915 + LTR8A LTR ERV1 1 581 -146 1664 106 35 0 chr5 48760072 48760299 -154325233 - AluSg/x SINE Alu -8 302 68 191 304 22 0 chr5 48761095 48761141 -154324391 - L2 LINE L2 -197 3075 3029 * 1057 292 59 24 chr5 48761139 48761564 -154323968 - L2 LINE L2 -8 3305 2866 740 158 38 45 chr5 48761704 48761837 -154323695 + FLAM_C SINE Alu 1 132 -1 531 239 221 14 chr5 48762004 48762217 -154323315 - MIR SINE MIR 0 262 6 2260 95 7 7 chr5 48762508 48762802 -154322730 + AluSq SINE Alu 1 294 -19 28 0 0 0 chr5 48762940 48762968 -154322564 + AT_rich Low_complexity Low_complexity 1 28 0 30637 63 114 1 chr5 48763236 48767399 -154318133 + L1P LINE L1 2 4634 -1512 961 312 86 21 chr5 48767550 48768073 -154317459 - ERVL LTR ERVL -830 4934 4378 374 360 12 6 chr5 48768045 48768209 -154317323 - ERVL LTR ERVL -2258 3506 3342 * 1959 306 81 19 chr5 48768351 48769325 -154316207 - ERVL LTR ERVL -1911 3085 2009 537 326 75 41 chr5 48769395 48769757 -154315775 - ERVL LTR ERVL -3828 1826 1453 5570 114 65 50 chr5 48769884 48770340 -154315192 - L1MA4A LINE L1 -2 6301 5853 2284 97 3 3 chr5 48770340 48770650 -154314882 - AluSx SINE Alu -2 310 1 5570 114 65 50 chr5 48770650 48771191 -154314341 - L1MA4A LINE L1 -450 5853 5289 270 0 0 0 chr5 48771191 48771221 -154314311 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5570 114 65 50 chr5 48771221 48771285 -154314247 - L1MA4A LINE L1 -1014 5289 5227 2298 84 27 0 chr5 48771566 48771863 -154313669 - AluSp SINE Alu -8 305 1 1807 200 80 37 chr5 48772637 48773102 -154312430 - MLT1D LTR MaLR 0 505 21 499 257 57 7 chr5 48773209 48773349 -154312183 - LTR16C LTR ERVL -1 490 344 213 280 89 33 chr5 48773729 48773880 -154311652 - L2 LINE L2 -334 2938 2782 371 258 0 11 chr5 48774618 48774707 -154310825 - L3 LINE CR1 -7 1570 1483 190 281 78 62 chr5 48774939 48775067 -154310465 + L2 LINE L2 3184 3313 0 412 302 69 13 chr5 48777389 48777548 -154307984 + MIR SINE MIR 47 214 -48 2411 98 0 0 chr5 48777758 48778064 -154307468 - AluSc SINE Alu -3 306 1 832 169 0 15 chr5 48779032 48779168 -154306364 - AluJo SINE Alu -178 134 1 2176 118 7 3 chr5 48779491 48779788 -154305744 - AluSx SINE Alu -12 300 3 261 290 28 37 chr5 48781338 48781445 -154304087 + MIR3 SINE MIR 88 193 -15 680 236 75 55 chr5 48781878 48782132 -154303400 - MER112 DNA MER1_type 0 260 2 334 275 22 107 chr5 48783222 48783333 -154302199 + MIR SINE MIR 85 177 -85 2322 92 13 3 chr5 48783333 48783638 -154301894 + AluSq SINE Alu 1 308 -5 334 275 22 107 chr5 48783638 48783704 -154301828 + MIR SINE MIR 177 247 -15 200 376 21 21 chr5 48786117 48786210 -154299322 + L2 LINE L2 3150 3242 -30 1666 184 161 20 chr5 48787090 48787579 -154297953 - LTR10A LTR ERV1 0 609 1 16242 224 11 29 chr5 48787579 48792706 -154292826 - LTR10A-int LTR ERV1 0 6649 2762 1506 209 26 64 chr5 48792706 48793174 -154292358 - LTR7 LTR ERV1 0 450 1 22 88 0 0 chr5 48793182 48793239 -154292293 + AT_rich Low_complexity Low_complexity 1 57 0 2618 21 0 0 chr5 48793319 48793602 -154291930 + L1PA4 LINE L1 5870 6152 -3 1012 198 0 5 chr5 48793649 48793851 -154291681 - HERVH LTR ERV1 -154 7559 7359 431 169 28 34 chr5 48794001 48794179 -154291353 + CT-rich Low_complexity Low_complexity 4 180 0 300 173 11 73 chr5 48794214 48794405 -154291127 + CT-rich Low_complexity Low_complexity 2 180 0 1949 116 49 0 chr5 48794802 48795086 -154290446 - AluSx SINE Alu -14 298 1 1088 283 54 71 chr5 48795150 48795684 -154289848 + LTR67 LTR ERVL 2 526 -31 1985 127 3 3 chr5 48796979 48797286 -154288246 + AluSx SINE Alu 1 307 0 1665 212 182 46 chr5 48797349 48798018 -154287514 - LTR41 LTR ERVL -6 767 8 386 314 97 16 chr5 48798266 48798451 -154287081 - HAL1 LINE L1 -2307 200 1 1391 227 38 48 chr5 48798677 48799074 -154286458 - MLT2C1 LTR ERVL -4 393 1 14837 61 17 7 chr5 48799824 48801818 -154283714 - L1P LINE L1 -1010 5136 3122 30 27 0 0 chr5 48802539 48802576 -154282956 + AT_rich Low_complexity Low_complexity 1 37 0 470 320 47 79 chr5 48803901 48804307 -154281225 + L2 LINE L2 2877 3269 -3 1645 162 3 114 chr5 48804727 48805060 -154280472 + AluJo SINE Alu 1 296 -6 3225 171 33 3 chr5 48805202 48805771 -154279761 - L1MC3 LINE L1 0 7785 7200 233 242 32 16 chr5 48805773 48805835 -154279697 - MLT1F1 LTR MaLR -434 133 71 881 179 22 85 chr5 48805850 48806027 -154279505 - AluJo SINE Alu -18 294 132 2056 97 23 48 chr5 48806027 48806337 -154279195 - AluSq SINE Alu -11 302 1 881 179 22 85 chr5 48806337 48806383 -154279149 - AluJo SINE Alu -180 132 85 612 256 70 42 chr5 48806593 48807033 -154278499 - MLT1H LTR MaLR -1 548 23 1484 151 37 9 chr5 48807857 48808294 -154277238 - LTR54 LTR ERV1 0 510 1 195 184 53 0 chr5 48808329 48808367 -154277165 - L2 LINE L2 -16 3256 3217 22 0 0 0 chr5 48808396 48808418 -154277114 + AT_rich Low_complexity Low_complexity 1 22 0 2178 168 40 175 chr5 48808512 48808802 -154276730 + LTR8A LTR ERV1 34 361 -366 3380 135 16 6 chr5 48808802 48809306 -154276226 - MER9 LTR ERVK -2 509 1 2178 168 40 175 chr5 48809306 48809817 -154275715 + LTR8A LTR ERV1 361 727 0 22 56 0 0 chr5 48809903 48809939 -154275593 + AT_rich Low_complexity Low_complexity 1 36 0 2376 108 46 8 chr5 48809946 48810315 -154275217 - L1PA13 LINE L1 -5 6158 5776 6201 150 26 31 chr5 48810321 48810488 -154275044 - L1PA13 LINE L1 -740 5428 5262 3934 95 54 2 chr5 48810488 48811025 -154274507 - L1PA11 LINE L1 -2 6172 5608 6201 150 26 31 chr5 48811025 48812098 -154273434 - L1PA13 LINE L1 -906 5262 4207 24 32 0 0 chr5 48812117 48812148 -154273384 + AT_rich Low_complexity Low_complexity 1 31 0 381 295 38 0 chr5 48812940 48813045 -154272487 - L2 LINE L2 -15 3298 3190 443 77 15 0 chr5 48813779 48813844 -154271688 - MER41B LTR ERV1 -87 548 483 218 192 19 0 chr5 48813971 48814023 -154271509 + (TG)n Simple_repeat Simple_repeat 2 54 0 591 149 28 0 chr5 48814058 48814165 -154271367 + L1MA6 LINE L1 6190 6299 -1 11813 105 56 63 chr5 48814280 48814670 -154270862 - L1P3 LINE L1 -3550 2911 2520 2142 135 0 0 chr5 48814670 48814966 -154270566 - AluSc SINE Alu -11 298 3 11813 105 56 63 chr5 48814966 48817326 -154268206 - L1P3 LINE L1 -3941 2520 36 1213 144 5 0 chr5 48817306 48817494 -154268038 - L1P3 LINE L1 -6271 190 2 * 391 319 57 32 chr5 48817695 48817852 -154267680 + MIR SINE MIR 27 187 -75 720 260 41 37 chr5 48817959 48818201 -154267331 + MLT1J LTR MaLR 1 243 -268 1977 154 172 27 chr5 48818219 48818627 -154266905 + MLT1C LTR MaLR 1 467 0 312 91 0 0 chr5 48818679 48818723 -154266809 + (GA)n Simple_repeat Simple_repeat 2 45 0 756 218 32 26 chr5 48818723 48818932 -154266600 - MLT1E LTR MaLR -355 212 3 2019 119 13 22 chr5 48819075 48819386 -154266146 - AluSx SINE Alu -4 308 1 841 230 100 81 chr5 48819411 48819909 -154265623 + MLT1H1 LTR MaLR 1 547 -8 2153 130 3 0 chr5 48820371 48820700 -154264832 - AluSq SINE Alu 0 330 1 748 236 134 0 chr5 48820749 48820965 -154264567 - L1ME3A LINE L1 -11 6159 5915 2370 191 93 8 chr5 48820984 48821470 -154264062 + MLT1F LTR MaLR 9 535 -7 2293 168 61 7 chr5 48821470 48821880 -154263652 - MSTB1 LTR MaLR 0 432 1 994 208 41 143 chr5 48821894 48822015 -154263517 - L1ME3A LINE L1 -270 5900 5768 2100 151 0 0 chr5 48822015 48822326 -154263206 - AluSx SINE Alu -1 311 1 994 208 41 143 chr5 48822326 48822459 -154263073 - L1ME3A LINE L1 -402 5768 5711 2160 120 0 7 chr5 48822459 48822758 -154262774 - AluSx SINE Alu -15 297 1 994 208 41 143 chr5 48822758 48822964 -154262568 - L1ME3A LINE L1 -459 5711 5486 2188 89 7 0 chr5 48822975 48823255 -154262277 - AluSp SINE Alu -29 284 3 278 170 21 0 chr5 48823816 48823863 -154261669 - L2 LINE L2 -4 3309 3262 2484 83 0 0 chr5 48824158 48824458 -154261074 + AluSg SINE Alu 1 300 -10 2193 117 0 3 chr5 48824646 48824946 -154260586 - AluSg SINE Alu -11 299 1 556 29 0 0 chr5 48824976 48825045 -154260487 + AluY SINE Alu 240 308 -4 243 0 0 0 chr5 48825116 48825143 -154260389 + (A)n Simple_repeat Simple_repeat 1 27 0 449 98 0 0 chr5 48825368 48825429 -154260103 + Alu SINE Alu 2 62 -251 * 636 116 0 12 chr5 48825426 48825512 -154260020 + AluSg/x SINE Alu 107 191 -121 1459 92 0 5 chr5 48825515 48825699 -154259833 + AluSp SINE Alu 107 289 -24 741 117 25 17 chr5 48825703 48825823 -154259709 - MLT1E3 LTR MaLR -425 199 79 963 144 144 59 chr5 48825922 48826124 -154259408 + MER20 DNA MER1_type 1 219 0 3849 130 60 0 chr5 48826235 48826804 -154258728 - LTR26 LTR ERV1 0 603 1 2065 147 0 3 chr5 48826866 48827178 -154258354 + AluSx SINE Alu 1 311 -1 2905 6 0 0 chr5 48827378 48827689 -154257843 - AluYa5 SINE Alu 0 311 1 1928 144 3 30 chr5 48827718 48828016 -154257516 + AluJo SINE Alu 1 290 -22 237 341 11 22 chr5 48828057 48828148 -154257384 + HAL1 LINE L1 2414 2503 -4 2328 100 3 3 chr5 48828338 48828647 -154256885 + AluSc SINE Alu 1 309 0 26 30 0 0 chr5 48829034 48829067 -154256465 + AT_rich Low_complexity Low_complexity 1 33 0 440 242 68 8 chr5 48829067 48829199 -154256333 + MIR SINE MIR 57 196 -66 2113 128 0 3 chr5 48829495 48829807 -154255725 + AluSx SINE Alu 1 311 -1 1835 128 6 47 chr5 48830176 48830496 -154255036 + AluJo SINE Alu 1 307 -5 605 231 65 123 chr5 48830496 48830976 -154254556 + L1MC4 LINE L1 7591 8042 0 1530 172 82 8 chr5 48831049 48831317 -154254215 - AluJo SINE Alu -24 288 1 231 207 11 23 chr5 48831948 48832035 -154253497 + GA-rich Low_complexity Low_complexity 2 87 0 2262 122 3 0 chr5 48832464 48832775 -154252757 - AluSq SINE Alu -1 312 1 243 0 0 0 chr5 48833332 48833359 -154252173 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2123 122 3 10 chr5 48833462 48833766 -154251766 + AluSq SINE Alu 1 302 -11 2442 38 35 3 chr5 48834565 48834853 -154250679 - AluY SINE Alu -14 297 1 370 253 13 0 chr5 48836568 48836647 -154248885 + L2 LINE L2 3226 3305 -8 291 349 63 0 chr5 48836887 48837028 -154248504 + MIR SINE MIR 37 184 -58 1867 148 14 0 chr5 48837298 48837582 -154247950 - AluJb SINE Alu -24 288 1 375 262 115 8 chr5 48838467 48838589 -154246943 - L2 LINE L2 -2 3270 3136 1585 127 26 85 chr5 48838648 48838955 -154246577 + L1MB7 LINE L1 5866 6154 -30 246 269 67 10 chr5 48841177 48841303 -154244229 - L1MC4 LINE L1 -1 8041 5959 225 228 0 53 chr5 48841295 48841352 -154244180 - L1MC4 LINE L1 -2065 5743 5690 * 646 300 22 31 chr5 48841352 48841579 -154243953 - MIR SINE MIR 0 262 38 602 178 156 106 chr5 48841657 48841761 -154243771 - MER5A DNA MER1_type 0 189 70 2057 130 0 0 chr5 48841761 48842071 -154243461 - AluSx SINE Alu 0 310 1 602 178 156 106 chr5 48842071 48842145 -154243387 - MER5A DNA MER1_type -119 70 1 741 255 79 41 chr5 48842168 48842440 -154243092 - L1MC4 LINE L1 -530 5634 5352 22 0 0 0 chr5 48842462 48842484 -154243048 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 48842634 48842669 -154242863 + AT_rich Low_complexity Low_complexity 1 35 0 703 173 0 31 chr5 48842864 48842991 -154242541 - FLAM_C SINE Alu -10 123 1 2395 97 3 0 chr5 48843001 48843309 -154242223 - AluSq SINE Alu -4 309 1 869 283 96 22 chr5 48843785 48844340 -154241192 - L1MC4 LINE L1 -1293 4853 4258 593 303 89 7 chr5 48844516 48844820 -154240712 - L1MC4 LINE L1 -2322 3824 3496 236 91 23 0 chr5 48844847 48844891 -154240641 + (TA)n Simple_repeat Simple_repeat 2 46 0 1523 138 102 25 chr5 48845049 48845273 -154240259 + AluJo SINE Alu 1 251 -61 3982 81 38 40 chr5 48845273 48845510 -154240022 - MER41A LTR ERV1 -1 553 317 2491 48 3 32 chr5 48845510 48845824 -154239708 - AluY SINE Alu -6 305 1 3982 81 38 40 chr5 48845824 48846140 -154239392 - MER41A LTR ERV1 -237 317 1 1523 138 102 25 chr5 48846140 48846190 -154239342 + AluJo SINE Alu 251 296 -16 266 50 25 0 chr5 48846406 48846446 -154239086 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 810 170 23 23 chr5 48847159 48847330 -154238202 + MER96B DNA MER1_type? 24 194 -223 266 345 36 27 chr5 48847744 48847854 -154237678 - L2 LINE L2 -8 3264 3154 1043 188 5 40 chr5 48847869 48848092 -154237440 - AluJo SINE Alu -10 302 88 205 332 195 25 chr5 48848116 48848224 -154237308 + L2 LINE L2 1945 2033 -1281 2254 100 0 7 chr5 48848224 48848523 -154237009 + AluSg1 SINE Alu 1 297 -12 205 332 195 25 chr5 48848523 48849023 -154236509 + L2 LINE L2 2033 2657 -657 1848 168 7 3 chr5 48849496 48849800 -154235732 - AluJo SINE Alu -7 305 1 752 163 8 8 chr5 48850009 48850138 -154235394 - FLAM_C SINE Alu -3 130 2 332 213 0 0 chr5 48850226 48850287 -154235245 + MER5A DNA MER1_type 9 69 -120 2367 94 3 3 chr5 48850457 48850766 -154234766 + AluSg SINE Alu 1 309 -1 741 240 134 0 chr5 48851103 48851320 -154234212 + MIR SINE MIR 5 250 -12 224 203 0 125 chr5 48851343 48851407 -154234125 + L2 LINE L2 3208 3263 -9 927 194 131 9 chr5 48851407 48851629 -154233903 + LTR41 LTR ERVL 1 249 -524 805 218 254 51 chr5 48851654 48851989 -154233543 + LTR41 LTR ERVL 360 762 -11 41393 67 8 2 chr5 48852203 48858309 -154227223 + L1PA5 LINE L1 11 6150 -4 22 35 0 0 chr5 48858428 48858457 -154227075 + AT_rich Low_complexity Low_complexity 1 29 0 984 118 6 37 chr5 48858535 48858696 -154226836 - AluJo/FRAM SINE Alu -1 311 156 696 128 27 149 chr5 48858699 48858807 -154226725 + AluJo SINE Alu 43 130 -182 2327 99 0 7 chr5 48858807 48859111 -154226421 + AluSq SINE Alu 3 304 -9 696 128 27 149 chr5 48859111 48859150 -154226382 + AluJo SINE Alu 130 172 -140 322 196 76 22 chr5 48860715 48860807 -154224725 - Charlie8 DNA MER1_type -2199 218 122 241 143 54 0 chr5 48861144 48861200 -154224332 + CT-rich Low_complexity Low_complexity 1 59 0 916 176 0 91 chr5 48861204 48861391 -154224141 - FAM SINE Alu -5 170 1 379 252 44 69 chr5 48862257 48862416 -154223116 + MER5A DNA MER1_type 35 189 0 241 338 79 21 chr5 48862678 48862819 -154222713 + MIR3 SINE MIR 8 173 -35 1375 178 12 4 chr5 48862839 48863097 -154222435 + MER33 DNA MER1_type 1 260 -64 965 220 45 89 chr5 48863100 48863442 -154222090 + MLT1A1 LTR MaLR 1 326 -39 557 114 23 0 chr5 48863442 48863530 -154222002 + MER21A LTR ERV1 1 90 -841 352 94 0 0 chr5 48863532 48863585 -154221947 - Alu SINE Alu -2 300 248 817 100 0 18 chr5 48863585 48863695 -154221837 - AluSg1 SINE Alu -201 108 1 3736 135 74 135 chr5 48863695 48864111 -154221421 + MER21A LTR ERV1 71 511 -420 533 149 0 0 chr5 48864111 48864185 -154221347 - AluJ/FLAM SINE Alu -237 75 2 3736 135 74 135 chr5 48864185 48864266 -154221266 + MER21A LTR ERV1 511 595 -336 7882 100 8 26 chr5 48864266 48865356 -154220176 + MER11C LTR ERVK 1 1071 0 3736 135 74 135 chr5 48865356 48865701 -154219831 + MER21A LTR ERV1 595 931 0 274 108 0 0 chr5 48865703 48865740 -154219792 + MLT1A1 LTR MaLR 360 396 0 1434 188 8 16 chr5 48866149 48866399 -154219133 + AluJo SINE Alu 1 248 -64 201 121 0 0 chr5 48867536 48867569 -154217963 + (TA)n Simple_repeat Simple_repeat 2 34 0 2063 134 0 0 chr5 48867573 48867864 -154217668 - AluSq SINE Alu -22 291 1 228 235 130 31 chr5 48868113 48868275 -154217257 - L1ME4a LINE L1 -2 6119 5942 415 286 10 20 chr5 48868299 48868397 -154217135 - L2 LINE L2 -30 3242 3146 2062 118 21 0 chr5 48868506 48868795 -154216737 - AluSx SINE Alu -17 295 1 289 284 34 89 chr5 48868825 48868902 -154216630 - L1ME4a LINE L1 -317 5804 5724 1807 171 3 3 chr5 48868902 48869194 -154216338 - AluJb SINE Alu -20 292 1 289 284 34 89 chr5 48869194 48869352 -154216180 - L1ME4a LINE L1 -397 5724 5582 295 271 65 19 chr5 48869752 48869859 -154215673 - MER91A DNA MER1_type -84 112 1 233 264 32 52 chr5 48870504 48870659 -154214873 - L1MC/D LINE L1 -1925 5883 5732 2237 115 0 0 chr5 48870770 48871065 -154214467 - AluSg SINE Alu -15 295 1 1773 168 7 3 chr5 48871085 48871383 -154214149 + AluJb SINE Alu 1 299 -13 257 182 91 52 chr5 48871383 48871460 -154214072 - L1MC/D LINE L1 -477 5644 5565 275 270 63 0 chr5 48871521 48871584 -154213948 + L2 LINE L2 3204 3270 -2 200 194 56 0 chr5 48872228 48872264 -154213268 - MIR SINE MIR -139 123 86 346 304 180 55 chr5 48872338 48872848 -154212684 + L1MC4a LINE L1 4692 5265 -881 2142 98 11 0 chr5 48872905 48873190 -154212342 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr5 48873190 48873218 -154212314 + AT_rich Low_complexity Low_complexity 1 28 0 985 271 128 25 chr5 48873218 48873705 -154211827 + L1MC4a LINE L1 5315 5863 -1945 2314 86 7 10 chr5 48873705 48874006 -154211526 + AluSq SINE Alu 1 300 -13 985 271 128 25 chr5 48874006 48874049 -154211483 + L1MC4a LINE L1 5863 5900 -1908 2112 97 50 0 chr5 48874172 48874450 -154211082 - AluSx SINE Alu -20 292 1 1965 220 222 2 chr5 48874564 48875100 -154210432 - MLT1E1 LTR MaLR 0 654 1 828 252 117 5 chr5 48875147 48875369 -154210163 - MIR SINE MIR -10 252 6 1228 159 5 10 chr5 48875415 48875623 -154209909 + AluJb SINE Alu 85 291 -21 1641 233 128 39 chr5 48875636 48876152 -154209380 - MLT1G1 LTR MaLR -2 593 32 2453 128 27 3 chr5 48876365 48876694 -154208838 - MER1B DNA MER1_type 0 337 1 267 254 0 0 chr5 48876890 48876949 -154208583 - L2 LINE L2 0 3313 3255 21 0 0 0 chr5 48877320 48877341 -154208191 + AT_rich Low_complexity Low_complexity 1 21 0 521 267 89 0 chr5 48877345 48877480 -154208052 + MER119 DNA MER1_type 3 149 -434 * 567 178 37 44 chr5 48877461 48877503 -154208029 + MER119 DNA MER1_type 449 490 -93 2297 112 0 0 chr5 48877503 48877807 -154207725 + AluSx SINE Alu 1 304 -8 567 178 37 44 chr5 48877807 48877899 -154207633 + MER119 DNA MER1_type 490 582 -1 190 244 183 0 chr5 48878786 48878868 -154206664 - L2 LINE L2 -336 2977 2881 1951 114 16 54 chr5 48879008 48879325 -154206207 - AluSx SINE Alu -7 305 1 500 325 108 35 chr5 48879526 48880054 -154205478 + L2 LINE L2 2709 3264 -8 2260 105 7 0 chr5 48880136 48880432 -154205100 - AluSx SINE Alu -14 298 1 211 258 247 10 chr5 48880658 48880755 -154204777 - MIR3 SINE MIR -7 201 82 793 239 129 32 chr5 48880904 48881179 -154204353 + MLT1D LTR MaLR 13 314 -312 1134 191 194 50 chr5 48881179 48881222 -154204310 - MLT1A1 LTR MaLR 0 365 330 2217 99 7 7 chr5 48881222 48881524 -154204008 + AluSq SINE Alu 1 302 -11 1134 191 194 50 chr5 48881524 48881799 -154203733 - MLT1A1 LTR MaLR -35 330 1 1168 202 5 0 chr5 48881799 48882007 -154203525 + MLT1D LTR MaLR 296 504 -1 528 281 128 42 chr5 48883345 48883985 -154201547 - L1ME4a LINE L1 -13 6108 5414 1959 121 3 67 chr5 48884085 48884416 -154201116 - AluSq SINE Alu -3 310 1 1971 110 21 11 chr5 48884741 48885067 -154200465 - AluSq SINE Alu 0 329 1 762 151 71 24 chr5 48886090 48886216 -154199316 + AluJ SINE Alu 2 133 -169 1071 180 10 35 chr5 48886234 48886434 -154199098 + AluJ SINE Alu 118 312 0 2319 95 7 3 chr5 48886441 48886747 -154198785 + AluY SINE Alu 1 307 -4 788 233 74 6 chr5 48887489 48887665 -154197867 + MER5A DNA MER1_type 2 189 0 1977 113 49 3 chr5 48888152 48888458 -154197074 + AluSx SINE Alu 1 312 0 41807 65 7 6 chr5 48888489 48894625 -154190907 - L1PA5 LINE L1 -1 6153 11 805 218 254 51 chr5 48894839 48895174 -154190358 - LTR41 LTR ERVL -11 762 360 927 194 131 9 chr5 48895199 48895421 -154190111 - LTR41 LTR ERVL -524 249 1 224 203 0 125 chr5 48895421 48895485 -154190047 - L2 LINE L2 -9 3263 3208 741 240 134 0 chr5 48895508 48895725 -154189807 - MIR SINE MIR -12 250 5 2367 94 3 3 chr5 48896062 48896371 -154189161 - AluSg SINE Alu -1 309 1 332 213 0 0 chr5 48896541 48896602 -154188930 - MER5A DNA MER1_type -120 69 9 785 163 23 0 chr5 48896690 48896819 -154188713 + BC200 scRNA scRNA 2 133 -67 1868 174 3 3 chr5 48897028 48897333 -154188199 + AluJo SINE Alu 1 305 -7 205 332 195 25 chr5 48897806 48898306 -154187226 - L2 LINE L2 -657 2657 2033 2254 100 0 7 chr5 48898306 48898605 -154186927 - AluSg1 SINE Alu -12 297 1 205 332 195 25 chr5 48898605 48898713 -154186819 - L2 LINE L2 -1281 2033 1945 1043 188 5 40 chr5 48898737 48898960 -154186572 + AluJo SINE Alu 88 302 -10 266 345 36 27 chr5 48898975 48899085 -154186447 + L2 LINE L2 3154 3264 -8 810 170 23 23 chr5 48899499 48899670 -154185862 - MER96B DNA MER1_type? -223 194 24 266 50 25 0 chr5 48900383 48900423 -154185109 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 1523 138 102 25 chr5 48900639 48900689 -154184843 - AluJo SINE Alu -16 296 251 3982 81 38 40 chr5 48900689 48901005 -154184527 + MER41A LTR ERV1 1 317 -237 2491 48 3 32 chr5 48901005 48901319 -154184213 + AluY SINE Alu 1 305 -6 3982 81 38 40 chr5 48901319 48901556 -154183976 + MER41A LTR ERV1 317 553 -1 1523 138 102 25 chr5 48901556 48901780 -154183752 - AluJo SINE Alu -61 251 1 236 91 23 0 chr5 48901938 48901982 -154183550 + (TA)n Simple_repeat Simple_repeat 2 46 0 593 303 89 7 chr5 48902009 48902313 -154183219 + L1MC4 LINE L1 3496 3824 -2322 869 283 96 22 chr5 48902489 48903044 -154182488 + L1MC4 LINE L1 4258 4853 -1293 2395 97 3 0 chr5 48903520 48903828 -154181704 + AluSq SINE Alu 1 309 -4 703 173 0 31 chr5 48903838 48903965 -154181567 + FLAM_C SINE Alu 1 123 -10 21 57 0 0 chr5 48904160 48904195 -154181337 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 48904345 48904367 -154181165 + AT_rich Low_complexity Low_complexity 1 22 0 741 255 79 41 chr5 48904389 48904661 -154180871 + L1MC4 LINE L1 5352 5634 -530 602 178 156 106 chr5 48904684 48904758 -154180774 + MER5A DNA MER1_type 1 70 -119 2058 130 0 0 chr5 48904758 48905068 -154180464 + AluSx SINE Alu 1 310 0 602 178 156 106 chr5 48905068 48905172 -154180360 + MER5A DNA MER1_type 70 189 0 646 300 22 31 chr5 48905250 48905477 -154180055 + MIR SINE MIR 38 262 0 225 228 0 53 chr5 48905477 48905534 -154179998 + L1MC4 LINE L1 5690 5743 -2065 * 246 269 67 10 chr5 48905526 48905652 -154179880 + L1MC4 LINE L1 5959 8041 -1 1585 127 26 85 chr5 48907875 48908182 -154177350 - L1MB7 LINE L1 -30 6154 5866 375 262 115 8 chr5 48908241 48908363 -154177169 + L2 LINE L2 3136 3270 -2 1867 148 14 0 chr5 48909249 48909533 -154175999 + AluJb SINE Alu 1 288 -24 291 349 63 0 chr5 48909803 48909944 -154175588 - MIR SINE MIR -58 150 37 370 253 13 0 chr5 48910184 48910263 -154175269 - L2 LINE L2 -8 3305 3226 2442 38 35 3 chr5 48911978 48912266 -154173266 + AluY SINE Alu 1 297 -14 2168 121 0 10 chr5 48913065 48913370 -154172162 - AluSq SINE Alu -11 302 1 243 0 0 0 chr5 48913473 48913500 -154172032 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2262 122 3 0 chr5 48914057 48914368 -154171164 + AluSq SINE Alu 1 312 -1 231 207 11 23 chr5 48914797 48914884 -154170648 + CT-rich Low_complexity Low_complexity 2 87 0 1530 172 82 8 chr5 48915515 48915783 -154169749 + AluJo SINE Alu 1 288 -24 605 231 65 123 chr5 48915856 48916336 -154169196 - L1MC4 LINE L1 0 8042 7591 1835 128 6 47 chr5 48916336 48916656 -154168876 - AluJo SINE Alu -5 307 1 2113 128 0 3 chr5 48917025 48917337 -154168195 - AluSx SINE Alu -1 311 1 440 242 68 8 chr5 48917633 48917765 -154167767 - MIR SINE MIR -66 196 57 26 30 0 0 chr5 48917765 48917798 -154167734 + AT_rich Low_complexity Low_complexity 1 33 0 2328 100 3 3 chr5 48918185 48918494 -154167038 - AluSc SINE Alu 0 309 1 237 341 11 22 chr5 48918684 48918775 -154166757 - HAL1 LINE L1 -4 2503 2414 1928 144 3 30 chr5 48918816 48919114 -154166418 - AluJo SINE Alu -22 290 1 2905 6 0 0 chr5 48919143 48919454 -154166078 + AluYa5 SINE Alu 1 311 0 2065 147 0 3 chr5 48919654 48919966 -154165566 - AluSx SINE Alu -1 311 1 3849 130 60 0 chr5 48920028 48920597 -154164935 + LTR26 LTR ERV1 1 603 0 963 144 144 59 chr5 48920708 48920910 -154164622 - MER20 DNA MER1_type 0 219 1 741 117 25 17 chr5 48921009 48921129 -154164403 + MLT1E3 LTR MaLR 79 199 -425 1459 92 0 5 chr5 48921133 48921317 -154164215 - AluSp SINE Alu -24 289 107 636 109 0 10 chr5 48921320 48921464 -154164068 - AluSp SINE Alu -122 191 2 243 0 0 0 chr5 48921689 48921716 -154163816 + (T)n Simple_repeat Simple_repeat 1 27 0 556 29 0 0 chr5 48921787 48921856 -154163676 - AluY SINE Alu -4 305 237 2193 117 0 3 chr5 48921886 48922186 -154163346 + AluSg SINE Alu 1 299 -11 2484 83 0 0 chr5 48922374 48922674 -154162858 - AluSg SINE Alu -10 300 1 278 170 21 0 chr5 48922969 48923016 -154162516 + L2 LINE L2 3262 3309 -4 2188 89 7 0 chr5 48923577 48923857 -154161675 + AluSp SINE Alu 3 284 -29 994 208 41 143 chr5 48923868 48924074 -154161458 + L1ME3A LINE L1 5486 5711 -459 2160 120 0 7 chr5 48924074 48924373 -154161159 + AluSx SINE Alu 1 297 -15 994 208 41 143 chr5 48924373 48924506 -154161026 + L1ME3A LINE L1 5711 5768 -402 2100 151 0 0 chr5 48924506 48924817 -154160715 + AluSx SINE Alu 1 311 -1 994 208 41 143 chr5 48924817 48924938 -154160594 + L1ME3A LINE L1 5768 5900 -270 2293 168 61 7 chr5 48924952 48925362 -154160170 + MSTB1 LTR MaLR 1 432 0 2193 203 82 22 chr5 48925362 48925859 -154159673 - MLT1F LTR MaLR -7 535 9 696 221 25 0 chr5 48925878 48926036 -154159496 + L1ME3A LINE L1 5915 6076 -94 243 217 0 33 chr5 48926106 48926143 -154159389 + GA-rich Low_complexity Low_complexity 3 39 -21 2153 130 3 0 chr5 48926143 48926450 -154159082 + AluSq SINE Alu 1 308 -5 243 217 0 33 chr5 48926450 48926472 -154159060 + GA-rich Low_complexity Low_complexity 39 60 0 841 230 100 81 chr5 48926934 48927432 -154158100 - MLT1H1 LTR MaLR -8 547 1 2019 119 13 22 chr5 48927457 48927768 -154157764 + AluSx SINE Alu 1 308 -4 721 216 64 19 chr5 48927911 48928086 -154157446 + MLT1E LTR MaLR 3 184 -409 555 56 0 0 chr5 48928098 48928169 -154157363 + (TC)n Simple_repeat Simple_repeat 2 72 0 1954 155 174 27 chr5 48928221 48928628 -154156904 - MLT1C LTR MaLR 0 467 1 720 260 41 37 chr5 48928646 48928888 -154156644 - MLT1J LTR MaLR -268 243 1 391 319 57 32 chr5 48928995 48929152 -154156380 - MIR SINE MIR -75 187 27 1213 144 5 0 chr5 48929353 48929541 -154155991 + L1P3 LINE L1 2 190 -6271 * 11902 104 56 63 chr5 48929521 48931882 -154153650 + L1P3 LINE L1 36 2520 -3941 2142 135 0 0 chr5 48931882 48932178 -154153354 + AluSc SINE Alu 3 298 -11 11902 104 56 63 chr5 48932178 48932568 -154152964 + L1P3 LINE L1 2520 2911 -3550 591 149 28 0 chr5 48932683 48932790 -154152742 - L1MA6 LINE L1 -1 6299 6190 218 192 19 0 chr5 48932825 48932877 -154152655 + (CA)n Simple_repeat Simple_repeat 2 54 0 443 77 15 0 chr5 48933004 48933069 -154152463 + MER41B LTR ERV1 483 548 -87 377 295 38 0 chr5 48933803 48933908 -154151624 + L2 LINE L2 3190 3298 -15 24 32 0 0 chr5 48934700 48934731 -154150801 + AT_rich Low_complexity Low_complexity 1 31 0 3548 167 17 11 chr5 48934750 48935469 -154150063 + L1P LINE L1 4207 4929 -1217 672 229 0 66 chr5 48935592 48935775 -154149757 + LTR8A LTR ERV1 557 727 0 5595 220 13 9 chr5 48935775 48937220 -154148312 + L1 LINE L1 2396 3846 -2300 4649 140 25 0 chr5 48937221 48937985 -154147547 + L1P LINE L1 1 783 -5363 21115 51 12 13 chr5 48938087 48941006 -154144526 - L1P LINE L1 -1598 4548 1632 1948 154 3 59 chr5 48941366 48941722 -154143810 + MER1B DNA MER1_type 2 337 0 2135 118 10 0 chr5 48941886 48942190 -154143342 - AluSx SINE Alu -5 307 1 25 31 0 0 chr5 48942217 48942249 -154143283 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr5 48944319 48944349 -154141183 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 48944651 48944673 -154140859 + AT_rich Low_complexity Low_complexity 1 22 0 2195 108 10 0 chr5 48944709 48945004 -154140528 - AluSx SINE Alu -13 299 2 2175 112 3 0 chr5 48946110 48946397 -154139135 + AluSp SINE Alu 1 288 -25 1177 164 0 0 chr5 48946727 48946904 -154138628 + AluSg/x SINE Alu 124 300 -12 631 317 84 28 chr5 48946921 48947277 -154138255 + HAL1b LINE L1 60 435 -913 1814 155 16 16 chr5 48947602 48947906 -154137626 - AluJo SINE Alu -8 304 1 719 260 105 0 chr5 48948094 48948294 -154137238 - MIR SINE MIR -34 228 8 1956 101 50 22 chr5 48948432 48948741 -154136791 - AluSq SINE Alu 0 317 1 409 284 135 18 chr5 48948741 48948868 -154136664 - MIR SINE MIR -12 250 139 5210 109 23 45 chr5 48948868 48949408 -154136124 + L1PB4 LINE L1 5137 5654 -502 2048 153 0 10 chr5 48949408 48949721 -154135811 + AluJb SINE Alu 2 311 -1 5210 109 23 45 chr5 48949721 48950213 -154135319 + L1PB4 LINE L1 5654 6156 0 409 284 135 18 chr5 48950213 48950307 -154135225 - MIR SINE MIR -123 139 3 454 171 133 19 chr5 48950442 48950547 -154134985 - L2 LINE L2 -2 3311 3195 198 0 0 0 chr5 48951823 48951845 -154133687 + (T)n Simple_repeat Simple_repeat 1 22 0 270 337 22 0 chr5 48952058 48952147 -154133385 + MLT1K LTR MaLR 159 249 -339 2342 207 67 34 chr5 48952652 48952756 -154132776 + L1ME1 LINE L1 4657 4756 -1410 1994 141 10 0 chr5 48952756 48953047 -154132485 + AluJo SINE Alu 1 294 -18 2342 207 67 34 chr5 48953047 48953153 -154132379 + L1ME1 LINE L1 4756 4857 -1309 2219 112 3 19 chr5 48953153 48953467 -154132065 - AluSx SINE Alu -3 309 1 1089 214 103 53 chr5 48953469 48953750 -154131782 - AluJb SINE Alu -7 295 1 2342 207 67 34 chr5 48953750 48954725 -154130807 + L1ME1 LINE L1 4857 5894 -272 1034 176 31 39 chr5 48954725 48954960 -154130572 + L1MC2 LINE L1 6082 6316 -28 2013 138 165 5 chr5 48954960 48955329 -154130203 - MSTA LTR MaLR 0 428 1 1034 176 31 39 chr5 48955329 48955349 -154130183 + L1MC2 LINE L1 6316 6335 -9 26 0 0 0 chr5 48955381 48955407 -154130125 + AT_rich Low_complexity Low_complexity 1 26 0 931 179 6 12 chr5 48955518 48955691 -154129841 - AluJb SINE Alu -18 294 123 1920 155 0 10 chr5 48955712 48956016 -154129516 - AluJb SINE Alu -11 301 1 681 262 29 44 chr5 48956032 48956307 -154129225 + L1ME1 LINE L1 5891 6161 -5 341 300 45 41 chr5 48956964 48957244 -154128288 + L1MEc LINE L1 2113 2435 -3807 26 0 0 0 chr5 48957344 48957370 -154128162 + AT_rich Low_complexity Low_complexity 1 26 0 3517 127 11 0 chr5 48957404 48957925 -154127607 - MER1A DNA MER1_type 0 527 1 12900 168 41 14 chr5 48957994 48960439 -154125093 + L1MA1 LINE L1 14 2525 -5040 650 50 119 0 chr5 48960439 48960599 -154124933 + L1P LINE L1 3029 3207 -2939 236 146 0 0 chr5 48960699 48960740 -154124792 + L1MA1 LINE L1 2485 2525 -5040 19315 32 11 10 chr5 48960740 48963879 -154121653 + L1PA4 LINE L1 3028 6152 -3 4951 152 119 13 chr5 48963884 48964780 -154120752 + L1MA1 LINE L1 2441 3549 -4016 1737 183 0 49 chr5 48964780 48965108 -154120424 + AluSx SINE Alu 1 312 0 4951 152 119 13 chr5 48965108 48965647 -154119885 + L1MA1 LINE L1 3549 4030 -3535 248 111 22 22 chr5 48965673 48965718 -154119814 + MER4A LTR ERV1 54 98 -566 1216 157 7 62 chr5 48965718 48965909 -154119623 + MER4A LTR ERV1 262 490 -174 4273 53 7 18 chr5 48965909 48966473 -154119059 - LTR6B LTR ERV1 0 558 1 1216 157 7 62 chr5 48966473 48966583 -154118949 + MER4A LTR ERV1 490 605 -59 2503 202 40 0 chr5 48966683 48967276 -154118256 + L1MA1 LINE L1 4028 4644 -2921 * 5891 171 8 40 chr5 48967263 48967637 -154117895 + L1MA1 LINE L1 5082 5466 -2255 4529 107 7 19 chr5 48967637 48968117 -154117415 + MER4A LTR ERV1 1 472 -192 2022 155 3 7 chr5 48968117 48968421 -154117111 - AluSx SINE Alu -9 303 1 4529 107 7 19 chr5 48968421 48968612 -154116920 + MER4A LTR ERV1 472 664 0 5891 171 8 40 chr5 48968612 48970837 -154114695 + L1MA1 LINE L1 5466 7477 -244 2326 103 0 0 chr5 48970837 48971147 -154114385 + AluSg SINE Alu 1 310 0 5891 171 8 40 chr5 48971147 48971217 -154114315 + L1MA1 LINE L1 7477 7548 -173 * 8301 65 36 9 chr5 48971214 48972459 -154113073 + L1PA7 LINE L1 4110 5427 -727 2391 94 7 0 chr5 48972459 48972767 -154112765 + AluSp SINE Alu 2 311 -2 8301 65 36 9 chr5 48972767 48973514 -154112018 + L1PA7 LINE L1 5427 6152 -2 1136 268 155 32 chr5 48973891 48974477 -154111055 + MLT2F LTR ERVL 6 663 0 261 0 0 0 chr5 48974488 48974517 -154111015 + (T)n Simple_repeat Simple_repeat 1 29 0 296 230 0 20 chr5 48974547 48974647 -154110885 + L1ME4a LINE L1 4561 4658 -1488 27 0 0 0 chr5 48974860 48974887 -154110645 + AT_rich Low_complexity Low_complexity 1 27 0 1570 196 19 19 chr5 48974889 48975200 -154110332 + AluJo SINE Alu 1 311 -1 2303 72 10 23 chr5 48975286 48975592 -154109940 + AluSg SINE Alu 1 302 -8 254 232 71 0 chr5 48975784 48975840 -154109692 - LTR67 LTR ERVL -385 172 113 426 183 0 12 chr5 48975939 48976021 -154109511 + Tigger5 DNA MER2_type 2243 2323 0 657 293 126 19 chr5 48976626 48977254 -154108278 + L1ME4a LINE L1 5257 5951 -170 21 0 0 0 chr5 48977495 48977516 -154108016 + AT_rich Low_complexity Low_complexity 1 21 0 1787 162 3 32 chr5 48978292 48978601 -154106931 - AluJo SINE Alu -12 300 1 2604 42 0 7 chr5 48978776 48979082 -154106450 - AluY SINE Alu -7 304 1 1623 166 52 28 chr5 48979085 48979375 -154106157 - AluJo SINE Alu -10 302 6 879 124 87 62 chr5 48979669 48979814 -154105718 + MLT1F LTR MaLR 325 531 -64 2349 68 0 3 chr5 48979814 48980121 -154105411 - AluY SINE Alu -5 306 1 879 124 87 62 chr5 48980121 48980186 -154105346 + MLT1F LTR MaLR 531 593 -2 1975 140 16 3 chr5 48983207 48983515 -154102017 - AluJo SINE Alu 0 312 1 315 261 185 27 chr5 48983566 48983750 -154101782 - L2 LINE L2 -105 3208 2996 1823 171 0 16 chr5 48984263 48984579 -154100953 + AluJo SINE Alu 1 311 -1 26 50 0 0 chr5 48984697 48984737 -154100795 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 48985597 48985620 -154099912 + AT_rich Low_complexity Low_complexity 1 23 0 3083 117 11 2 chr5 49037801 49038237 -154047295 + MER41C-int LTR ERV1 7317 7756 0 3333 152 49 9 chr5 49038237 49038557 -154046975 + MER41C LTR ERV1 1 352 -202 207 0 0 0 chr5 49038557 49038580 -154046952 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3333 152 49 9 chr5 49038580 49038792 -154046740 + MER41C LTR ERV1 352 554 0 14594 164 111 107 chr5 49038797 49041307 -154044225 - LTR49-int LTR ERV1 -87 6244 3747 1864 183 3 10 chr5 49041307 49041619 -154043913 - AluJb SINE Alu -2 310 1 14594 164 111 107 chr5 49041619 49042023 -154043509 - LTR49-int LTR ERV1 -2584 3747 3346 2235 114 0 7 chr5 49042023 49042322 -154043210 - AluSq SINE Alu -16 297 1 14594 164 111 107 chr5 49042322 49042560 -154042972 - LTR49-int LTR ERV1 -2985 3346 3111 2447 167 23 46 chr5 49042560 49042845 -154042687 + MSTB LTR MaLR 1 274 -152 2150 141 0 3 chr5 49042845 49043158 -154042374 - AluSx SINE Alu 0 312 1 2447 167 23 46 chr5 49043158 49043308 -154042224 + MSTB LTR MaLR 274 426 0 14594 164 111 107 chr5 49043308 49043409 -154042123 - LTR49-int LTR ERV1 -3220 3111 3012 1176 154 4 68 chr5 49043409 49043612 -154041920 + AluJb SINE Alu 87 275 -37 2218 155 119 18 chr5 49043612 49043999 -154041533 + MSTB LTR MaLR 1 426 0 1176 154 4 68 chr5 49043999 49044029 -154041503 + AluJb SINE Alu 275 305 -7 14594 164 111 107 chr5 49044029 49044866 -154040666 - LTR49-int LTR ERV1 -3319 3012 1895 10276 30 21 129 chr5 49044866 49046438 -154039094 - SVA Other Other 0 1386 17 14594 164 111 107 chr5 49046438 49046665 -154038867 - LTR49-int LTR ERV1 -4436 1895 1670 372 158 45 0 chr5 49046679 49046812 -154038720 + (TA)n Simple_repeat Simple_repeat 1 139 0 181 134 21 52 chr5 49046791 49046888 -154038644 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 * 342 153 53 0 chr5 49046892 49047049 -154038483 + (TA)n Simple_repeat Simple_repeat 2 170 -10 191 35 0 35 chr5 49047049 49047078 -154038454 + (TATAA)n Simple_repeat Simple_repeat 3 30 0 342 153 53 0 chr5 49047078 49047090 -154038442 + (TA)n Simple_repeat Simple_repeat 170 180 0 1165 190 146 12 chr5 49047091 49047379 -154038153 - LTR49-int LTR ERV1 -4665 1666 998 541 134 0 36 chr5 49047493 49047605 -154037927 - LTR49-int LTR ERV1 -4941 1390 1283 370 258 0 0 chr5 49047605 49047671 -154037861 - tRNA-Glu-GAG tRNA tRNA 0 75 10 892 147 71 61 chr5 49047674 49047728 -154037804 - LTR49-int LTR ERV1 -5118 1213 1161 7646 66 31 2 chr5 49047728 49048670 -154036862 + LTR5 LTR ERVK 1 969 0 892 147 71 61 chr5 49048670 49048812 -154036720 - LTR49-int LTR ERV1 -5170 1161 1015 * 2039 158 29 35 chr5 49048810 49049554 -154035978 - LTR49-int LTR ERV1 -4466 1480 1 809 156 4 1 chr5 49049556 49049699 -154035833 - LTR49 LTR ERV1 0 595 468 555 143 0 22 chr5 49049698 49049789 -154035743 + LTR49 LTR ERV1 505 593 -2 * 385 174 29 0 chr5 49049814 49049883 -154035649 - L2 LINE L2 -5 3308 3238 579 311 108 42 chr5 49049920 49050299 -154035233 - L2 LINE L2 -667 2647 2244 3416 135 67 23 chr5 49050570 49051185 -154034347 - MER39B LTR ERV1 -2 651 10 223 216 216 11 chr5 49051411 49051499 -154034033 - MIR SINE MIR 0 262 157 2007 195 23 66 chr5 49051517 49052004 -154033528 + MER41B LTR ERV1 134 599 -36 268 297 50 10 chr5 49052069 49052170 -154033362 + MER66-int LTR ERV1 400 504 -6172 2369 107 0 0 chr5 49052228 49052537 -154032995 - AluSg SINE Alu -1 309 1 653 227 30 129 chr5 49052555 49052920 -154032612 + MER66-int LTR ERV1 756 1084 -5592 2282 70 0 3 chr5 49053041 49053352 -154032180 + AluY SINE Alu 1 310 0 903 176 20 0 chr5 49053550 49053703 -154031829 + MER66-int LTR ERV1 1302 1457 -5219 2574 50 0 0 chr5 49055155 49055457 -154030075 + AluY SINE Alu 1 302 -9 2221 112 3 7 chr5 49055873 49056169 -154029363 - AluSx SINE Alu -17 295 1 1413 230 43 16 chr5 49056169 49056621 -154028911 + MER66-int LTR ERV1 2334 2836 -3840 988 176 17 116 chr5 49056677 49056979 -154028553 + MER41B LTR ERV1 340 611 -24 465 268 125 12 chr5 49056988 49057156 -154028376 - MIR SINE MIR -73 189 3 1715 176 7 7 chr5 49057893 49058183 -154027349 - AluSx SINE Alu -22 290 1 308 233 33 147 chr5 49058496 49058646 -154026886 - Tigger8 DNA MER2_type -488 178 46 1807 151 45 59 chr5 49058950 49059308 -154026224 + MLT1A1 LTR MaLR 13 365 0 241 330 75 0 chr5 49059352 49059458 -154026074 - L2 LINE L2 -192 3080 2967 300 326 62 51 chr5 49059611 49059724 -154025808 + MIR SINE MIR 28 145 -117 2074 93 55 14 chr5 49059724 49060014 -154025518 + AluSg SINE Alu 1 302 -8 300 326 62 51 chr5 49060014 49060078 -154025454 + MIR SINE MIR 145 207 -55 3276 256 37 86 chr5 49060887 49061213 -154024319 - L1MD1 LINE L1 0 6242 5902 1799 176 0 0 chr5 49061213 49061497 -154024035 + AluSx SINE Alu 1 284 -28 3276 256 37 86 chr5 49061497 49061986 -154023546 - L1MD1 LINE L1 -340 5902 5391 1969 147 3 23 chr5 49061986 49062293 -154023239 - AluJb SINE Alu -11 301 1 3276 256 37 86 chr5 49062293 49062623 -154022909 - L1MD1 LINE L1 -851 5391 5197 2217 96 4 0 chr5 49062623 49062942 -154022590 - AluSq SINE Alu 0 320 1 3276 256 37 86 chr5 49062942 49063275 -154022257 - L1MD1 LINE L1 -1045 5197 4849 186 302 86 35 chr5 49063275 49063391 -154022141 - MIR SINE MIR -12 250 129 301 277 24 12 chr5 49063456 49063539 -154021993 - L2 LINE L2 -2 3270 3187 241 389 98 16 chr5 49063545 49063738 -154021794 - L2 LINE L2 -224 3048 2840 459 228 16 24 chr5 49063743 49063870 -154021662 - L2 LINE L2 -969 2345 2220 1990 136 16 3 chr5 49063969 49064277 -154021255 + AluSx SINE Alu 1 312 0 3101 113 24 5 chr5 49064493 49064919 -154020613 + MER57B LTR ERV1 1 434 0 1770 184 37 56 chr5 49065233 49065682 -154019850 + MLT1C LTR MaLR 1 467 0 2114 100 17 23 chr5 49065736 49066035 -154019497 - AluSq SINE Alu -16 297 1 35 24 0 0 chr5 49066824 49066866 -154018666 + AT_rich Low_complexity Low_complexity 1 42 0 1066 191 91 0 chr5 49067381 49067580 -154017952 - MER20 DNA MER1_type 0 219 3 212 200 0 0 chr5 49070349 49070389 -154015143 - MIR SINE MIR -75 187 148 1498 181 7 4 chr5 49070401 49070672 -154014860 - AluJo SINE Alu -38 274 3 657 193 73 7 chr5 49070672 49070822 -154014710 - MIR SINE MIR -100 162 3 2988 3 0 0 chr5 49070938 49071255 -154014277 + AluYb8 SINE Alu 1 317 -1 265 247 198 25 chr5 49071712 49071874 -154013658 - MIR3 SINE MIR -3 205 16 1092 104 0 114 chr5 49072679 49072867 -154012665 - AluSc SINE Alu 0 309 144 2534 140 32 16 chr5 49072867 49073310 -154012222 + LTR7 LTR ERV1 1 450 0 1092 104 0 114 chr5 49073310 49073322 -154012210 - AluSc SINE Alu -165 144 132 740 148 98 16 chr5 49073322 49073444 -154012088 - FLAM_C SINE Alu -1 132 1 2229 117 0 0 chr5 49073632 49073932 -154011600 - AluSg SINE Alu -10 300 1 1177 278 120 5 chr5 49075159 49075551 -154009981 + L2 LINE L2 2396 2832 -482 198 0 0 0 chr5 49075621 49075643 -154009889 + (T)n Simple_repeat Simple_repeat 1 22 0 317 203 0 0 chr5 49075647 49075716 -154009816 - LTR30 LTR ERV1 -98 624 556 559 195 22 119 chr5 49075764 49075949 -154009583 - MLT1J LTR MaLR -327 184 18 366 107 0 0 chr5 49076478 49076534 -154008998 + (TCCC)n Simple_repeat Simple_repeat 3 58 0 300 161 103 11 chr5 49076565 49076652 -154008880 - L1MC5 LINE L1 -399 7562 7468 23 0 0 0 chr5 49077315 49077338 -154008194 + AT_rich Low_complexity Low_complexity 1 23 0 262 287 26 26 chr5 49077842 49077957 -154007575 - MER103 DNA DNA -47 119 5 2880 19 0 0 chr5 49078481 49078799 -154006733 + AluYb8 SINE Alu 1 318 0 323 183 0 0 chr5 49080014 49080074 -154005458 - MER116 DNA Mariner -15 65 6 21 0 0 0 chr5 49080125 49080146 -154005386 + AT_rich Low_complexity Low_complexity 1 21 0 396 211 73 18 chr5 49080286 49080395 -154005137 + MER117 DNA MER1_type 53 167 -30 812 311 20 4 chr5 49081796 49082040 -154003492 - MIR SINE MIR -3 259 12 1080 254 24 0 chr5 49082311 49082559 -154002973 + MIR SINE MIR 9 262 0 234 0 0 0 chr5 49082624 49082650 -154002882 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr5 49083019 49083045 -154002487 + AT_rich Low_complexity Low_complexity 1 26 0 2225 120 75 61 chr5 49083350 49083776 -154001756 - MSTB1 LTR MaLR 0 432 1 2301 82 0 3 chr5 49083853 49084144 -154001388 - AluY SINE Alu -21 290 1 362 318 68 27 chr5 49084622 49084770 -154000762 + L3b LINE CR1 1336 1489 -94 1342 111 44 22 chr5 49084770 49084995 -154000537 - MER30 DNA MER1_type 0 230 1 549 280 161 64 chr5 49085021 49085191 -154000341 - L2 LINE L2 -24 3289 3137 696 159 0 80 chr5 49085191 49085329 -154000203 - FLAM_C SINE Alu -6 127 1 549 280 161 64 chr5 49085329 49085972 -153999560 - L2 LINE L2 -176 3137 2377 791 152 8 15 chr5 49086059 49086191 -153999341 - FLAM_C SINE Alu -2 131 1 341 288 149 39 chr5 49086198 49086413 -153999119 - MIR SINE MIR -13 249 15 222 37 0 0 chr5 49086568 49086595 -153998937 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 395 240 122 48 chr5 49089554 49089725 -153995807 - L1ME4a LINE L1 -236 5885 5685 1782 158 52 9 chr5 49089725 49090054 -153995478 - MER2 DNA MER2_type 0 344 2 395 240 122 48 chr5 49090054 49090153 -153995379 - L1ME4a LINE L1 -436 5685 5595 246 241 224 24 chr5 49090237 49090407 -153995125 - L1ME4a LINE L1 -19 6102 5899 424 207 17 0 chr5 49090407 49090523 -153995009 + (TA)n Simple_repeat Simple_repeat 1 118 0 377 318 62 22 chr5 49090596 49090870 -153994662 - MLT1K LTR MaLR -20 568 284 377 299 7 28 chr5 49090956 49091100 -153994432 - MER5A DNA MER1_type -6 183 43 33 43 0 0 chr5 49091229 49091276 -153994256 + AT_rich Low_complexity Low_complexity 1 47 0 2198 119 0 0 chr5 49092218 49092511 -153993021 - AluSq SINE Alu -20 293 1 5684 93 12 4 chr5 49092643 49093842 -153991690 - L1PB1 LINE L1 -9 6142 4910 304 313 70 8 chr5 49093924 49094052 -153991480 - L1ME4a LINE L1 -4 6117 5982 21 0 0 0 chr5 49095346 49095367 -153990165 + AT_rich Low_complexity Low_complexity 1 21 0 210 143 0 0 chr5 49095594 49095629 -153989903 + (A)n Simple_repeat Simple_repeat 1 35 0 252 297 61 99 chr5 49096910 49097122 -153988410 + L2 LINE L2 2807 3010 -262 235 306 16 0 chr5 49097278 49097340 -153988192 + L2 LINE L2 3208 3270 -2 868 252 117 58 chr5 49098789 49099148 -153986384 - MLT1J1 LTR MaLR -24 422 37 2226 137 2 49 chr5 49099148 49099557 -153985975 - MLT1B LTR MaLR 0 390 1 868 252 117 58 chr5 49099557 49099590 -153985942 - MLT1J1 LTR MaLR -409 37 7 384 293 157 7 chr5 49099653 49099800 -153985732 + MIR SINE MIR 20 188 -74 2285 129 19 11 chr5 49101554 49101926 -153983606 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 49102487 49102509 -153983023 + AT_rich Low_complexity Low_complexity 1 22 0 183 146 0 146 chr5 49103245 49103300 -153982232 + L2 LINE L2 3267 3313 0 225 127 16 32 chr5 49104103 49104166 -153981366 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 208 39 13 chr5 49104845 49104922 -153980610 + (TA)n Simple_repeat Simple_repeat 2 80 0 21 36 0 0 chr5 49106209 49106237 -153979295 + AT_rich Low_complexity Low_complexity 1 28 0 1628 163 29 7 chr5 49106237 49106513 -153979019 - AluJo SINE Alu -30 282 1 438 213 41 57 chr5 49106753 49106875 -153978657 + L2 LINE L2 3193 3312 -1 233 132 44 44 chr5 49108422 49108505 -153977027 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 207 170 0 0 chr5 49108856 49108903 -153976629 + (TA)n Simple_repeat Simple_repeat 1 47 0 318 289 0 0 chr5 49108903 49108993 -153976539 - L1MC4 LINE L1 -1339 6703 6614 2502 63 3 0 chr5 49109004 49109307 -153976225 - AluY SINE Alu -7 304 1 1673 149 0 47 chr5 49109593 49109869 -153975663 - AluJb SINE Alu -25 287 25 780 219 71 112 chr5 49111104 49111373 -153974159 - MIR SINE MIR -1 261 4 2206 105 0 3 chr5 49114589 49114883 -153970649 + AluSx SINE Alu 1 293 -19 341 371 52 16 chr5 49115837 49116045 -153969487 + MIR SINE MIR 14 232 -30 2042 141 3 0 chr5 49116968 49117265 -153968267 + AluSx SINE Alu 1 298 -14 4062 186 46 2 chr5 49117270 49118111 -153967421 - MER63C DNA MER1_type -52 878 1 1858 103 128 3 chr5 49118638 49118959 -153966573 + MER46B DNA MER2_type 1 236 0 805 112 26 0 chr5 49119455 49119571 -153965961 + FLAM_C SINE Alu 1 119 -24 29 60 0 0 chr5 49119571 49119621 -153965911 + AT_rich Low_complexity Low_complexity 1 50 0 202 346 59 44 chr5 49120413 49120549 -153964983 - L2 LINE L2 -19 3253 3116 184 373 0 0 chr5 49120816 49120875 -153964657 + L2 LINE L2 3203 3261 -11 2319 100 0 0 chr5 49121151 49121450 -153964082 + AluSx SINE Alu 5 303 -9 1848 239 29 77 chr5 49121685 49122349 -153963183 - L1ME LINE L1 -5433 637 6 2222 109 3 0 chr5 49122743 49123036 -153962496 + AluSg1 SINE Alu 1 294 -15 376 222 183 6 chr5 49123309 49123489 -153962043 - L1ME4a LINE L1 -274 5847 5636 1783 154 146 8 chr5 49123831 49124207 -153961325 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr5 49124229 49124252 -153961280 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr5 49124684 49124715 -153960817 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4827 20 0 4 chr5 49124715 49125277 -153960255 - L1PA2 LINE L1 -11 6144 5585 208 250 0 26 chr5 49125655 49125731 -153959801 + T-rich Low_complexity Low_complexity 1 74 0 752 126 42 0 chr5 49125906 49126025 -153959507 + AluJb SINE Alu 1 124 -188 265 290 37 19 chr5 49126145 49126252 -153959280 - L1ME4a LINE L1 -484 5637 5529 369 211 70 44 chr5 49126555 49126669 -153958863 - MIR SINE MIR -31 231 115 196 264 125 42 chr5 49126675 49126747 -153958785 + L2 LINE L2 3190 3267 -5 223 191 0 0 chr5 49127607 49127649 -153957883 + A-rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr5 49128094 49128117 -153957415 + (TTA)n Simple_repeat Simple_repeat 2 24 0 10194 64 15 28 chr5 49128125 49129504 -153956028 - SVA Other Other -17 1369 8 32733 54 1 6 chr5 49130150 49136328 -153949204 - L1PA5 LINE L1 -4 6150 11 2179 120 0 3 chr5 49136642 49136941 -153948591 + AluSx SINE Alu 1 298 -14 478 302 8 0 chr5 49139015 49139141 -153946391 + MIR3 SINE MIR 3 129 -79 336 300 69 26 chr5 49139367 49139547 -153945985 + MER20B DNA MER1_type 7 199 -20 225 306 211 25 chr5 49139880 49140315 -153945217 - L2 LINE L2 -817 2497 1982 245 106 0 21 chr5 49140315 49140362 -153945170 + (GA)n Simple_repeat Simple_repeat 1 46 0 2255 126 73 45 chr5 49140777 49141199 -153944333 - Tigger2a DNA MER2_type 0 434 1 209 232 14 29 chr5 49141788 49141857 -153943675 + CT-rich Low_complexity Low_complexity 2 69 0 34 0 0 0 chr5 49142786 49142820 -153942712 + AT_rich Low_complexity Low_complexity 1 34 0 2291 99 0 0 chr5 49143902 49144204 -153941328 + AluY SINE Alu 5 306 -5 2200 113 0 10 chr5 49144309 49144619 -153940913 - AluSq SINE Alu -6 307 1 27 29 0 0 chr5 49144921 49144955 -153940577 + AT_rich Low_complexity Low_complexity 1 34 0 2226 122 7 0 chr5 49145125 49145428 -153940104 - AluSx SINE Alu -5 307 3 192 77 0 0 chr5 49145883 49145909 -153939623 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 377 244 196 84 chr5 49149723 49149948 -153935584 - MIR SINE MIR -11 251 2 1643 170 94 3 chr5 49151065 49151395 -153934137 + MLT1D LTR MaLR 1 360 -145 5853 132 31 10 chr5 49151405 49152646 -153932886 - L1PB1 LINE L1 0 6151 4888 3130 126 19 0 chr5 49152646 49153184 -153932348 + L1PBa LINE L1 1761 2308 -4555 831 145 6 66 chr5 49153187 49153353 -153932179 + MLT1D LTR MaLR 350 505 0 396 0 0 0 chr5 49154059 49154103 -153931429 + (TG)n Simple_repeat Simple_repeat 2 45 0 2132 107 0 14 chr5 49154103 49154392 -153931140 - AluSx SINE Alu -27 285 1 696 221 47 70 chr5 49155245 49155310 -153930222 - L1MC4 LINE L1 -763 7279 7214 2331 96 3 0 chr5 49155310 49155612 -153929920 - AluSq SINE Alu -10 303 1 696 221 47 70 chr5 49155612 49155845 -153929687 - L1MC4 LINE L1 -828 7214 6988 5500 164 28 2 chr5 49157050 49157727 -153927805 - L1PB1 LINE L1 -1774 4372 3659 387 0 0 0 chr5 49157727 49157770 -153927762 + (TG)n Simple_repeat Simple_repeat 2 44 0 5500 164 28 2 chr5 49157770 49158084 -153927448 - L1PB1 LINE L1 -2487 3659 3355 259 269 15 0 chr5 49158302 49158369 -153927163 + L3 LINE CR1 864 931 -646 186 221 229 74 chr5 49158704 49158750 -153926782 + L3 LINE CR1 1183 1220 -357 1913 141 78 29 chr5 49158750 49159097 -153926435 - THE1B LTR MaLR 0 364 1 11439 102 11 1 chr5 49159099 49160660 -153924872 - THE1B-int LTR MaLR -2 1578 1 1954 107 42 139 chr5 49160660 49161063 -153924469 - THE1B LTR MaLR 0 364 1 186 221 229 74 chr5 49161063 49161134 -153924398 + L3 LINE CR1 1219 1323 -254 246 128 0 0 chr5 49161178 49161217 -153924315 + (CA)n Simple_repeat Simple_repeat 2 40 0 27 87 0 0 chr5 49161248 49161317 -153924215 + AT_rich Low_complexity Low_complexity 1 69 0 3194 127 111 30 chr5 49161317 49161875 -153923657 + MER6A DNA MER2_type 3 605 0 319 267 11 11 chr5 49161922 49162012 -153923520 - L1MC4 LINE L1 -1339 6703 6614 214 282 188 12 chr5 49162015 49162100 -153923432 + L3 LINE CR1 1398 1497 -80 189 0 0 0 chr5 49162116 49162137 -153923395 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 236 250 0 0 chr5 49162141 49162193 -153923339 - L2 LINE L2 -21 3292 3241 2229 123 0 0 chr5 49162450 49162750 -153922782 - AluSx SINE Alu -12 300 1 5204 139 38 18 chr5 49164202 49165038 -153920494 - L1PA16 LINE L1 -6 6160 5292 198 0 0 0 chr5 49165038 49165060 -153920472 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5204 139 38 18 chr5 49165060 49165344 -153920188 - L1PA16 LINE L1 -874 5292 5015 312 303 56 63 chr5 49165445 49165587 -153919945 + MIR SINE MIR 3 143 -65 258 81 0 0 chr5 49168866 49168903 -153916629 + (TG)n Simple_repeat Simple_repeat 2 38 0 33 56 0 0 chr5 49169151 49169205 -153916327 + AT_rich Low_complexity Low_complexity 1 54 0 27 87 0 0 chr5 49169477 49169546 -153915986 + AT_rich Low_complexity Low_complexity 1 69 0 4371 38 2 0 chr5 49169708 49170232 -153915300 + L1PA5 LINE L1 5629 6153 -1 797 159 31 0 chr5 49170323 49170486 -153915046 + L1MA8 LINE L1 6097 6264 -27 24 0 0 0 chr5 49170797 49170821 -153914711 + AT_rich Low_complexity Low_complexity 1 24 0 2926 3 0 0 chr5 49171512 49171826 -153913706 + AluYb8 SINE Alu 1 314 -4 269 138 50 0 chr5 49173732 49173812 -153911720 + (TA)n Simple_repeat Simple_repeat 1 84 0 255 152 0 0 chr5 49176661 49176707 -153908825 + CT-rich Low_complexity Low_complexity 3 48 0 685 203 16 8 chr5 49176712 49176840 -153908692 - FLAM_A SINE Alu -3 130 2 1203 254 119 31 chr5 49177420 49178027 -153907505 + MLT2F LTR ERVL 4 663 0 376 207 165 25 chr5 49178664 49178785 -153906747 + MLT1H1 LTR MaLR 418 555 0 1794 124 45 31 chr5 49179282 49179573 -153905959 - AluSx SINE Alu -17 295 1 514 246 80 17 chr5 49179661 49179836 -153905696 + L2 LINE L2 3128 3313 0 458 268 57 6 chr5 49180631 49180788 -153904744 + MER103 DNA DNA 2 166 0 887 103 0 0 chr5 49180933 49181050 -153904482 - Tigger1 DNA MER2_type 0 2418 2302 7770 50 1 4 chr5 49181053 49182814 -153902718 + L1P LINE L1 3 1886 -4260 2011 213 15 36 chr5 49282814 49283289 -153802243 - MER44D DNA MER2_type -85 520 1 189 0 0 0 chr5 49283295 49283316 -153802216 + (TG)n Simple_repeat Simple_repeat 2 22 0 268 297 166 29 chr5 49283369 49283682 -153801850 - L2 LINE L2 -342 2972 2617 649 234 35 80 chr5 49283776 49283977 -153801555 + L2 LINE L2 3121 3312 -1 283 200 21 143 chr5 49284459 49284599 -153800933 - HAL1 LINE L1 -10 2497 2375 229 207 22 59 chr5 49284778 49284913 -153800619 + (TATATG)n Simple_repeat Simple_repeat 2 131 0 * 296 158 29 70 chr5 49284831 49285002 -153800530 + (TA)n Simple_repeat Simple_repeat 1 164 0 389 293 95 44 chr5 49285067 49285340 -153800192 - HAL1 LINE L1 -428 2079 1793 212 57 0 29 chr5 49285340 49285375 -153800157 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 4434 39 2 0 chr5 49285375 49285910 -153799622 - L1PA4 LINE L1 -24 6131 5596 762 209 106 91 chr5 49286013 49286267 -153799265 - L1M4b LINE L1 -6601 258 1 398 290 161 0 chr5 49287352 49287507 -153798025 + MIR SINE MIR 76 255 -7 1364 165 86 16 chr5 49287860 49288115 -153797417 + MSTA LTR MaLR 156 428 0 8826 155 9 37 chr5 49288117 49289741 -153795791 + MSTA-int LTR MaLR 3 1580 0 1775 169 158 11 chr5 49289741 49290114 -153795418 + MSTA LTR MaLR 1 428 0 284 282 128 26 chr5 49290217 49290373 -153795159 - MLT1I LTR MaLR -46 363 192 5152 120 13 3 chr5 49290423 49295465 -153790067 - L1PA8 LINE L1 -2 6170 999 190 189 68 68 chr5 49295572 49295646 -153789886 + L3 LINE CR1 430 503 -1074 2239 101 0 0 chr5 49297913 49298219 -153787313 - AluY SINE Alu -5 306 1 5428 121 27 27 chr5 49299002 49300059 -153785473 - L1PA15 LINE L1 -1 6164 5103 1147 131 46 51 chr5 49300059 49300296 -153785236 + THE1C LTR MaLR 140 375 0 9059 159 9 37 chr5 49300296 49301921 -153783611 + THE1C-int LTR MaLR 1 1580 0 1737 142 48 46 chr5 49301928 49302301 -153783231 + THE1C LTR MaLR 2 375 0 10283 198 35 9 chr5 49302301 49304420 -153781112 - L1PA15 LINE L1 -1147 4999 2819 369 0 0 0 chr5 49304420 49304461 -153781071 + (TG)n Simple_repeat Simple_repeat 2 42 0 10283 198 35 9 chr5 49304461 49304564 -153780968 - L1PA15 LINE L1 -3327 2819 2720 262 336 109 25 chr5 49304583 49304702 -153780830 - L2 LINE L2 -33 3239 3111 229 262 48 29 chr5 49304898 49305001 -153780531 - L1M4 LINE L1 -1326 4820 4716 373 352 50 19 chr5 49305185 49305503 -153780029 - L1M4 LINE L1 -1708 4438 4111 188 371 11 11 chr5 49305850 49305939 -153779593 - MIR SINE MIR -71 191 103 1533 144 22 0 chr5 49306587 49306857 -153778675 - L1MA3 LINE L1 0 6305 6030 191 340 195 47 chr5 49306860 49307502 -153778030 - L2 LINE L2 -575 2739 2003 315 260 19 65 chr5 49307504 49307691 -153777841 + L1MC/D LINE L1 3912 4093 -2053 402 265 0 20 chr5 49307771 49307873 -153777659 + MLT2E LTR ERVL 32 131 -497 475 313 60 30 chr5 49308536 49308737 -153776795 - MIR SINE MIR -37 225 19 261 336 0 0 chr5 49308840 49308977 -153776555 + L1MC/D LINE L1 5261 5397 -777 21 0 0 0 chr5 49309567 49309588 -153775944 + AT_rich Low_complexity Low_complexity 1 21 0 238 306 27 9 chr5 49309744 49309855 -153775677 + L1MC/D LINE L1 5692 5804 -2004 472 269 0 0 chr5 49309862 49309970 -153775562 + FAM SINE Alu 5 112 -73 412 313 34 28 chr5 49310104 49310283 -153775249 - Charlie8 DNA MER1_type -2142 275 96 6634 68 9 12 chr5 49310560 49311844 -153773688 + L1PA8 LINE L1 5045 6325 0 267 152 0 0 chr5 49311845 49311891 -153773641 + GA-rich Low_complexity Low_complexity 2 47 0 390 310 35 10 chr5 49311909 49312109 -153773423 + L1ME4a LINE L1 5621 5825 -296 23 68 0 0 chr5 49312125 49312169 -153773363 + AT_rich Low_complexity Low_complexity 1 44 0 276 250 43 35 chr5 49312486 49312602 -153772930 - L2 LINE L2 -1313 2001 1885 1030 250 122 24 chr5 49312911 49313517 -153772015 - L2 LINE L2 0 3313 2658 359 258 146 22 chr5 49313529 49313707 -153771825 + LTR33 LTR ERVL 12 211 -310 243 386 10 10 chr5 49316035 49316136 -153769396 + MIR SINE MIR 16 116 -92 22 0 0 0 chr5 49317518 49317540 -153767992 + AT_rich Low_complexity Low_complexity 1 22 0 671 219 105 64 chr5 49317885 49318228 -153767304 - L1ME2 LINE L1 -10 6154 5798 459 200 32 12 chr5 49318210 49318395 -153767137 - L1ME2 LINE L1 -706 5458 5220 * 277 296 31 19 chr5 49318402 49318561 -153766971 - L1ME2 LINE L1 -968 5178 5018 201 349 80 40 chr5 49318831 49319006 -153766526 - L2 LINE L2 0 3313 3132 1474 210 35 118 chr5 49319808 49320298 -153765234 - MLT1E LTR MaLR -2 591 144 2187 121 0 3 chr5 49320298 49320603 -153764929 + AluSx SINE Alu 2 305 -7 1474 210 35 118 chr5 49320603 49320627 -153764905 - MLT1E LTR MaLR -449 144 120 663 221 29 41 chr5 49320623 49320795 -153764737 - MLT1E LTR MaLR -423 170 1 * 452 284 74 23 chr5 49321197 49321373 -153764159 + MIR SINE MIR 10 194 -68 936 286 94 29 chr5 49321545 49321929 -153763603 - MLT1I LTR MaLR 0 409 1 262 291 178 27 chr5 49323808 49324066 -153761466 + L1MEd LINE L1 1371 1667 -4863 306 328 76 12 chr5 49324324 49324574 -153760958 + L1MEd LINE L1 2309 2574 -3966 180 111 0 0 chr5 49324720 49324747 -153760785 + (TG)n Simple_repeat Simple_repeat 2 28 0 3014 51 0 127 chr5 49325026 49325539 -153759993 + LTR7 LTR ERV1 1 448 -2 4209 236 111 12 chr5 49325615 49325632 -153759900 + L1MC4 LINE L1 6480 6494 -1548 1291 235 96 12 chr5 49325632 49325977 -153759555 + MLT1A2 LTR MaLR 1 374 0 4209 236 111 12 chr5 49325977 49327252 -153758280 + L1MC4 LINE L1 6494 7900 -142 27 49 0 0 chr5 49327277 49327318 -153758214 + AT_rich Low_complexity Low_complexity 1 41 0 593 293 111 35 chr5 49327483 49327799 -153757733 + L1MEd LINE L1 3327 3618 -2922 8656 37 21 2 chr5 49327799 49328850 -153756682 + MER11C LTR ERVK 1 1071 0 593 293 111 35 chr5 49328850 49328869 -153756663 + L1MEd LINE L1 3618 3634 -2906 3170 80 5 16 chr5 49328869 49329318 -153756214 - MLT2A1 LTR ERVL 0 444 1 593 293 111 35 chr5 49329318 49329442 -153756090 + L1MEd LINE L1 3634 3822 -2718 197 299 30 15 chr5 49329751 49329818 -153755714 - L2 LINE L2 -8 3305 3238 192 374 141 0 chr5 49330065 49330164 -153755368 + MIR3 SINE MIR 13 125 -83 235 226 73 110 chr5 49330469 49330633 -153754899 + MER112 DNA MER1_type 4 161 -99 21 0 0 0 chr5 49331260 49331281 -153754251 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr5 49331373 49331416 -153754116 + AT_rich Low_complexity Low_complexity 1 43 0 28 38 0 19 chr5 49331459 49331478 -153754054 + AT_rich Low_complexity Low_complexity 1 19 -33 2636 184 38 12 chr5 49331478 49331978 -153753554 - MLT2B2 LTR ERVL -1 514 2 28 38 0 19 chr5 49331978 49332011 -153753521 + AT_rich Low_complexity Low_complexity 19 52 0 2429 63 0 3 chr5 49332055 49332354 -153753178 + AluY SINE Alu 1 298 -13 350 304 76 99 chr5 49332667 49333335 -153752197 + L2 LINE L2 2323 2975 -339 258 323 0 0 chr5 49334202 49334267 -153751265 + L2 LINE L2 3243 3307 -6 391 174 60 81 chr5 49334586 49334735 -153750797 - L1MD3 LINE L1 0 7995 7850 69 48 0 0 chr5 49335169 49335273 -153750259 + AT_rich Low_complexity Low_complexity 1 104 0 21 36 0 0 chr5 49335439 49335467 -153750065 + AT_rich Low_complexity Low_complexity 1 28 0 235 309 25 12 chr5 49335869 49335950 -153749582 + MIR SINE MIR 65 146 -62 21 36 0 0 chr5 49336155 49336183 -153749349 + AT_rich Low_complexity Low_complexity 1 28 0 253 221 39 0 chr5 49337522 49337625 -153747907 + (TA)n Simple_repeat Simple_repeat 1 107 0 2156 131 0 0 chr5 49338019 49338325 -153747207 - AluSx SINE Alu -5 307 2 224 204 0 0 chr5 49338536 49338585 -153746947 + A-rich Low_complexity Low_complexity 4 52 0 824 331 112 52 chr5 49339489 49340024 -153745508 + MLT1K LTR MaLR 12 578 -10 185 286 95 0 chr5 49340215 49340278 -153745254 - MIR3 SINE MIR -3 205 137 25 0 0 0 chr5 49340629 49340654 -153744878 + AT_rich Low_complexity Low_complexity 1 25 0 628 151 17 0 chr5 49341034 49341153 -153744379 - L1MA9 LINE L1 -1 6311 6191 1969 175 41 3 chr5 49341154 49341520 -153744012 - LTR26 LTR ERV1 0 603 224 463 283 60 72 chr5 49341520 49341771 -153743761 - L1M3b LINE L1 -5677 604 357 * 808 259 22 48 chr5 49341757 49342040 -153743492 - L1M3b LINE L1 -5861 420 1 221 0 35 0 chr5 49342346 49342375 -153743157 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2217 229 78 75 chr5 49342605 49343822 -153741710 + L1MC5 LINE L1 6475 7705 -256 2145 108 0 0 chr5 49343822 49344134 -153741398 + AluSx SINE Alu 7 318 0 2217 229 78 75 chr5 49344134 49344165 -153741367 + L1MC5 LINE L1 7705 7734 -227 943 206 115 41 chr5 49344175 49344540 -153740992 + MSTC LTR MaLR 1 428 0 432 241 53 59 chr5 49344541 49344728 -153740804 + L1MC5 LINE L1 7741 7926 -35 596 299 68 18 chr5 49344802 49345023 -153740509 + MIR SINE MIR 15 246 -16 235 286 116 18 chr5 49345273 49345385 -153740147 - L2 LINE L2 -7 3306 3184 263 333 63 6 chr5 49346033 49346192 -153739340 + MIR SINE MIR 83 250 -12 381 22 0 0 chr5 49347704 49347750 -153737782 + (CA)n Simple_repeat Simple_repeat 2 47 0 2142 120 0 0 chr5 49347866 49348158 -153737374 + AluSx SINE Alu 1 292 -20 653 346 39 15 chr5 49348466 49349009 -153736523 + L1ME LINE L1 5258 5813 -357 229 331 38 54 chr5 49349708 49349892 -153735640 - L2 LINE L2 0 3313 3133 315 289 0 12 chr5 49350663 49350746 -153734786 - MIR SINE MIR -67 141 60 1640 128 16 62 chr5 49350790 49351094 -153734438 - AluSx SINE Alu -22 290 1 1510 161 18 18 chr5 49351169 49351455 -153734077 + THE1C LTR MaLR 90 375 0 275 256 102 43 chr5 49351482 49351614 -153733918 - MIR SINE MIR -67 141 25 708 308 112 33 chr5 49351622 49351927 -153733605 + MER119 DNA MER1_type 5 333 -250 264 200 320 0 chr5 49351928 49352028 -153733504 + MER119 DNA MER1_type 438 569 -14 206 273 76 91 chr5 49352941 49353073 -153732459 + MER5B DNA MER1_type 6 136 -53 375 281 22 0 chr5 49353142 49353231 -153732301 + MER5A DNA MER1_type 22 112 -77 324 0 0 0 chr5 49354391 49354427 -153731105 + (T)n Simple_repeat Simple_repeat 1 36 0 324 0 0 0 chr5 49355249 49355285 -153730247 + (T)n Simple_repeat Simple_repeat 1 36 0 1758 93 0 0 chr5 49355841 49356078 -153729454 - AluY SINE Alu -8 303 67 305 125 47 31 chr5 49356302 49356366 -153729166 + MADE1 DNA Mariner 16 80 0 2039 254 52 26 chr5 49356661 49357162 -153728370 + MLT1F LTR MaLR 29 542 0 24 0 0 0 chr5 49359830 49359854 -153725678 + AT_rich Low_complexity Low_complexity 1 24 0 1400 108 0 0 chr5 49360013 49360217 -153725315 + L1MA2 LINE L1 6101 6304 0 240 247 26 0 chr5 49360220 49360297 -153725235 + A-rich Low_complexity Low_complexity 4 82 0 190 160 40 0 chr5 49360957 49361007 -153724525 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1566 173 58 7 chr5 49361579 49361926 -153723606 + L1ME3A LINE L1 1331 1782 -4644 295 22 22 22 chr5 49362989 49363034 -153722498 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 225 211 18 18 chr5 49363383 49363440 -153722092 + (CATA)n Simple_repeat Simple_repeat 4 60 0 644 282 22 44 chr5 49363781 49364097 -153721435 - L1ME LINE L1 -389 5773 5465 2148 254 52 23 chr5 49364111 49364880 -153720652 + L1ME3A LINE L1 3866 4656 -1770 202 213 64 0 chr5 49365911 49365958 -153719574 - L2 LINE L2 -2 3311 3262 316 242 22 44 chr5 49368245 49368336 -153717196 - L2 LINE L2 -32 3281 3193 3031 129 46 12 chr5 49369116 49369613 -153715919 - MER75 DNA T2_type 0 514 1 1326 87 0 0 chr5 49369648 49369831 -153715701 - AluY SINE Alu -5 306 124 2418 73 0 6 chr5 49371183 49371496 -153714036 + AluY SINE Alu 1 311 0 21 71 0 0 chr5 49371701 49371743 -153713789 + AT_rich Low_complexity Low_complexity 1 42 0 212 405 0 0 chr5 49372307 49372391 -153713141 - L2 LINE L2 -317 2955 2872 261 212 45 0 chr5 49372884 49372950 -153712582 + L1ME3A LINE L1 5644 5712 -738 994 195 29 25 chr5 49372950 49373227 -153712305 + L1MA4 LINE L1 6012 6289 -11 180 0 0 0 chr5 49373509 49373529 -153712003 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 416 257 104 6 chr5 49373550 49373733 -153711799 + L1ME3A LINE L1 6029 6229 -221 1315 116 0 0 chr5 49373933 49374114 -153711418 - AluSc SINE Alu -14 295 115 380 246 97 23 chr5 49374540 49374715 -153710817 - Charlie7 DNA MER1_type -716 1896 1709 1009 247 174 10 chr5 49374737 49375121 -153710411 - Charlie7 DNA MER1_type -2074 538 92 4499 30 0 2 chr5 49375658 49376194 -153709338 - L1PA3 LINE L1 -3 6152 5618 2659 34 0 0 chr5 49376194 49376516 -153709016 + L1P LINE L1 1724 2045 -4101 442 232 32 0 chr5 49376773 49376868 -153708664 + MIR3 SINE MIR 100 197 -11 316 317 71 20 chr5 49376972 49377172 -153708360 - MIR SINE MIR -11 251 17 913 298 163 14 chr5 49378310 49378739 -153706793 - L2 LINE L2 -5 3308 2816 184 183 17 17 chr5 49379057 49379117 -153706415 + CT-rich Low_complexity Low_complexity 3 62 0 1368 189 107 0 chr5 49379135 49379453 -153706079 + L1MD1 LINE L1 5890 6241 -1 229 284 23 0 chr5 49379890 49379978 -153705554 - L1MC/D LINE L1 -2530 5512 5423 328 341 15 0 chr5 49380265 49380382 -153705150 - MER94 DNA DNA 0 134 13 1937 117 31 7 chr5 49380382 49380673 -153704859 - AluSc SINE Alu -11 298 1 328 341 15 0 chr5 49380673 49380687 -153704845 - MER94 DNA DNA -121 13 1 251 298 63 21 chr5 49380720 49380911 -153704621 + L1M4 LINE L1 4919 5117 -1029 367 305 80 13 chr5 49383395 49383546 -153701986 - LTR16A LTR ERVL -21 429 269 184 324 28 28 chr5 49384483 49384591 -153700941 - MIR SINE MIR -6 256 149 210 333 22 22 chr5 49384625 49384715 -153700817 - MIR SINE MIR -100 108 19 2029 117 3 3 chr5 49384978 49385342 -153700190 + AluSg SINE Alu 1 364 0 507 190 204 29 chr5 49385948 49386085 -153699447 + MER20 DNA MER1_type 59 219 0 286 299 93 0 chr5 49386776 49386873 -153698659 + MARNA DNA Mariner 468 573 -13 2233 192 28 21 chr5 49387451 49387699 -153697833 - MLT1C LTR MaLR 0 467 213 1574 205 36 25 chr5 49387699 49388060 -153697472 + MLT1A1 LTR MaLR 1 365 0 2233 192 28 21 chr5 49388060 49388238 -153697294 - MLT1C LTR MaLR -254 213 38 328 308 60 26 chr5 49390332 49390449 -153695083 + MLT1K LTR MaLR 146 266 -322 692 43 0 11 chr5 49391786 49391879 -153693653 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 1298 187 97 21 chr5 49391900 49392073 -153693459 - AluJo SINE Alu 0 312 107 198 0 0 0 chr5 49392073 49392095 -153693437 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1298 187 97 21 chr5 49392095 49392210 -153693322 - AluJo SINE Alu -205 107 2 1995 103 0 4 chr5 49395669 49395972 -153689560 + AluSg SINE Alu 8 309 0 289 299 91 19 chr5 49397524 49397678 -153687854 - L2 LINE L2 -38 3275 3111 32 75 0 0 chr5 49397870 49397937 -153687595 + AT_rich Low_complexity Low_complexity 1 67 0 236 321 29 58 chr5 49398015 49398152 -153687380 - MER5B DNA MER1_type -44 134 2 874 220 16 0 chr5 49398348 49398534 -153686998 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr5 49398745 49398767 -153686765 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 49399044 49399065 -153686467 + AT_rich Low_complexity Low_complexity 1 21 0 818 265 31 5 chr5 49400973 49401196 -153684336 + MIR SINE MIR 7 235 -27 222 37 0 0 chr5 49401742 49401769 -153683763 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 275 83 25 chr5 49401798 49401918 -153683614 - MIR SINE MIR -75 187 61 23 0 0 0 chr5 49402635 49402658 -153682874 + AT_rich Low_complexity Low_complexity 1 23 0 362 211 95 0 chr5 49403038 49403133 -153682399 + L1MD2 LINE L1 6256 6359 0 22 56 0 0 chr5 49403961 49403997 -153681535 + AT_rich Low_complexity Low_complexity 1 36 0 198 353 85 46 chr5 49404579 49404732 -153680800 - L2 LINE L2 -4 3268 3110 197 305 43 85 chr5 49404806 49404970 -153680562 - L2 LINE L2 -221 3051 2895 1550 157 8 23 chr5 49405486 49405845 -153679687 + MER1B DNA MER1_type 26 339 0 687 267 87 0 chr5 49405949 49406110 -153679422 - MER5A DNA MER1_type 0 189 15 223 297 70 86 chr5 49408602 49408730 -153676802 - MIR3 SINE MIR -1 207 82 16875 106 61 22 chr5 49409500 49410377 -153675155 + Charlie3 DNA MER1_type 1 842 -1864 1493 143 75 23 chr5 49410377 49410642 -153674890 - AluJb SINE Alu 0 312 34 16875 106 61 22 chr5 49410642 49411431 -153674101 + Charlie3 DNA MER1_type 842 1599 -1107 2069 132 0 3 chr5 49411431 49411727 -153673805 - AluSx SINE Alu -17 295 1 16875 106 61 22 chr5 49411727 49412663 -153672869 + Charlie3 DNA MER1_type 1599 2706 0 186 43 0 0 chr5 49413663 49413686 -153671846 + (TCTA)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 49414315 49414337 -153671195 + AT_rich Low_complexity Low_complexity 1 22 0 6734 21 24 0 chr5 49414732 49415537 -153669995 + L1PA4 LINE L1 5320 6143 -12 205 157 78 0 chr5 49415707 49415758 -153669774 + A-rich Low_complexity Low_complexity 1 55 0 1527 169 0 37 chr5 49416072 49416345 -153669187 - AluJb SINE Alu -21 291 29 1544 167 0 16 chr5 49418140 49418397 -153667135 + AluJo SINE Alu 1 253 -59 549 165 31 0 chr5 49418403 49418500 -153667032 + L1PB4 LINE L1 5831 5930 -226 891 192 13 0 chr5 49418505 49418661 -153666871 + AluJo SINE Alu 125 282 -30 1989 122 0 30 chr5 49418836 49419139 -153666393 - AluSg SINE Alu -16 294 1 376 307 27 40 chr5 49421839 49421989 -153663543 + MIR3 SINE MIR 58 205 -3 382 159 37 0 chr5 49422310 49422393 -153663139 - MER5A DNA MER1_type -99 90 4 238 223 32 0 chr5 49422493 49422587 -153662945 + GA-rich Low_complexity Low_complexity 3 99 0 26 30 0 0 chr5 49422724 49422757 -153662775 + AT_rich Low_complexity Low_complexity 1 33 0 229 282 27 64 chr5 49423009 49423119 -153662413 - L2 LINE L2 -36 3277 3172 190 281 0 18 chr5 49423227 49423284 -153662248 - MIR SINE MIR -103 159 104 383 21 0 0 chr5 49424158 49424205 -153661327 - L1PA6 LINE L1 -3 6151 6105 346 279 70 31 chr5 49426297 49426426 -153659106 + MIR SINE MIR 88 221 -41 246 275 202 28 chr5 49426840 49427018 -153658514 + L1ME4a LINE L1 3624 3832 -2314 2180 96 3 0 chr5 49427325 49427616 -153657916 + AluY SINE Alu 1 292 -19 312 254 120 62 chr5 49427629 49428003 -153657529 + L1ME4a LINE L1 5708 6103 -18 21 0 0 0 chr5 49428851 49428872 -153656660 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr5 49430492 49430519 -153655013 + (A)n Simple_repeat Simple_repeat 1 27 0 205 238 0 32 chr5 49430528 49430591 -153654941 + GA-rich Low_complexity Low_complexity 2 62 0 22 0 0 0 chr5 49431819 49431841 -153653691 + AT_rich Low_complexity Low_complexity 1 22 0 1698 231 38 21 chr5 49433167 49433644 -153651888 - MER113 DNA MER1_type? -36 485 1 315 0 0 0 chr5 49434234 49434269 -153651263 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 49434758 49434781 -153650751 + AT_rich Low_complexity Low_complexity 1 23 0 640 310 179 37 chr5 49435113 49436350 -153649182 + L2 LINE L2 1625 3039 -274 563 210 118 75 chr5 49436395 49436581 -153648951 + MER3 DNA MER1_type 16 209 0 227 283 0 0 chr5 49436538 49436591 -153648941 - MER3 DNA MER1_type -119 90 38 * 34 42 0 0 chr5 49436608 49436656 -153648876 + AT_rich Low_complexity Low_complexity 1 48 0 401 294 40 8 chr5 49436668 49436794 -153648738 + L2 LINE L2 3175 3304 -9 207 359 142 27 chr5 49436848 49437143 -153648389 + L2 LINE L2 2588 2916 -398 606 177 43 55 chr5 49438268 49438432 -153647100 + MER53 DNA DNA 2 163 -26 330 224 0 82 chr5 49439096 49439194 -153646338 - L1MC4 LINE L1 -1339 6703 6614 314 219 73 10 chr5 49439116 49439212 -153646320 + L1MC4 LINE L1 6614 6715 -1327 * 260 301 14 14 chr5 49439455 49439528 -153646004 + MIR SINE MIR 13 85 -177 240 86 0 0 chr5 49439702 49439737 -153645795 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 54 0 0 chr5 49439831 49439868 -153645664 + AT_rich Low_complexity Low_complexity 1 37 0 334 258 72 36 chr5 49439936 49440130 -153645402 + L1ME4a LINE L1 5833 6033 -88 299 253 35 0 chr5 49440202 49440289 -153645243 + (TA)n Simple_repeat Simple_repeat 2 91 0 21 36 0 0 chr5 49440357 49440385 -153645147 + AT_rich Low_complexity Low_complexity 1 28 0 192 143 0 0 chr5 49441606 49441648 -153643884 + (CTA)n Simple_repeat Simple_repeat 1 42 0 256 219 85 0 chr5 49442432 49442514 -153643018 + MIR SINE MIR 109 197 -65 244 289 67 29 chr5 49442712 49442816 -153642716 + MIR SINE MIR 117 224 -38 235 203 31 0 chr5 49445120 49445184 -153640348 + (TA)n Simple_repeat Simple_repeat 1 66 0 345 279 29 0 chr5 49446871 49446975 -153638557 - MIR3 SINE MIR -17 191 85 748 210 45 35 chr5 49447153 49447353 -153638179 - MIR SINE MIR -59 203 2 228 318 47 19 chr5 49449234 49449341 -153636191 + MIR SINE MIR 74 183 -79 711 242 56 6 chr5 49449378 49449556 -153635976 - L1PB4 LINE L1 -12 6144 5958 309 263 175 9 chr5 49451766 49451880 -153633652 + MIR SINE MIR 35 167 -95 227 325 38 0 chr5 49452617 49452697 -153632835 + L2 LINE L2 3231 3313 0 711 230 54 0 chr5 49454095 49454243 -153631289 + MER20 DNA MER1_type 63 218 -1 233 298 0 64 chr5 49454329 49454423 -153631109 + MIR SINE MIR 122 209 -53 256 375 70 40 chr5 49454573 49454845 -153630687 + L3b LINE CR1 1289 1568 -15 219 69 0 0 chr5 49455787 49455816 -153629716 + (T)n Simple_repeat Simple_repeat 1 29 0 749 250 121 13 chr5 49457149 49457381 -153628151 + MIR SINE MIR 6 262 0 1648 192 17 7 chr5 49458329 49458631 -153626901 - AluJo SINE Alu -7 305 1 207 304 54 27 chr5 49459689 49459801 -153625731 - MER5A DNA MER1_type -68 121 7 2252 177 52 0 chr5 49460692 49461099 -153624433 + MSTC LTR MaLR 1 428 0 220 320 39 0 chr5 49461430 49461508 -153624024 - MIR SINE MIR -6 256 176 2152 185 21 58 chr5 49461678 49462196 -153623336 - MLT1D LTR MaLR 0 505 7 1346 237 39 48 chr5 49462219 49462636 -153622896 - MLT1D-int LTR MaLR -70 1665 881 3887 207 22 37 chr5 49462708 49463603 -153621929 - MLT1D-int LTR MaLR -484 887 6 1717 219 59 47 chr5 49463607 49464101 -153621431 - MLT1D LTR MaLR 0 505 6 291 319 62 19 chr5 49464180 49464340 -153621192 - MIR3 SINE MIR -36 172 6 275 268 41 10 chr5 49464688 49464785 -153620747 - MIR SINE MIR -85 177 78 260 393 113 32 chr5 49464817 49465224 -153620308 - L2 LINE L2 -26 3246 2807 278 264 35 0 chr5 49465393 49465480 -153620052 + MER94 DNA DNA 42 131 -3 385 269 70 91 chr5 49465743 49465985 -153619547 - MIR SINE MIR 0 262 26 255 31 0 0 chr5 49466156 49466188 -153619344 + (A)n Simple_repeat Simple_repeat 1 32 0 3312 106 21 0 chr5 49467332 49467814 -153617718 - Tigger4(Zombi) DNA MER2_type 0 2731 2240 1223 137 35 5 chr5 49467809 49468006 -153617526 - Tigger4(Zombi) DNA MER2_type -2528 203 1 * 2294 63 3 0 chr5 49468109 49468393 -153617139 - AluY SINE Alu -26 285 1 320 276 69 26 chr5 49468909 49469025 -153616507 + L2 LINE L2 3193 3313 0 209 329 0 0 chr5 49469031 49469104 -153616428 - MIR SINE MIR -61 201 129 21 36 0 0 chr5 49469940 49469968 -153615564 + AT_rich Low_complexity Low_complexity 1 28 0 1215 153 55 51 chr5 49470362 49470598 -153614934 + AluJo SINE Alu 1 237 -75 346 317 122 0 chr5 49474231 49474415 -153611117 + MIR SINE MIR 2 207 -55 248 128 0 21 chr5 49476979 49477026 -153608506 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 225 0 0 0 chr5 49477404 49477429 -153608103 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 227 246 0 18 chr5 49479210 49479267 -153606265 + G-rich Low_complexity Low_complexity 4 59 0 331 224 0 0 chr5 49480439 49480515 -153605017 + MER116 DNA Mariner 5 80 0 261 324 0 0 chr5 49482721 49482795 -153602737 - MIR3 SINE MIR -21 187 114 296 286 48 38 chr5 49483845 49483950 -153601582 - L2 LINE L2 -5 3308 3203 1518 241 82 120 chr5 49484529 49485447 -153600085 - L1MCc LINE L1 -5524 899 17 2311 74 0 3 chr5 49485530 49485827 -153599705 + AluY SINE Alu 1 296 -15 283 336 70 35 chr5 49486096 49486352 -153599180 - HAL1 LINE L1 -870 1637 1373 6576 35 1 0 chr5 49486519 49487781 -153597751 - L1PA3 LINE L1 -116 6039 4777 3927 35 0 2 chr5 49487780 49488269 -153597263 + L1PA3 LINE L1 4267 4754 -1392 * 686 270 78 9 chr5 49488269 49488499 -153597033 - L1MCc LINE L1 -5067 1356 1111 451 297 147 44 chr5 49488753 49489181 -153596351 + LTR33 LTR ERVL 1 472 -49 260 338 27 61 chr5 49490073 49490221 -153595311 - MIR3 SINE MIR -3 205 63 2228 102 57 28 chr5 49490640 49490994 -153594538 + THE1B LTR MaLR 1 364 0 25 75 0 0 chr5 49491266 49491319 -153594213 + AT_rich Low_complexity Low_complexity 1 53 0 360 0 0 0 chr5 49491386 49491426 -153594106 + (CA)n Simple_repeat Simple_repeat 2 41 0 2501 93 31 6 chr5 49493616 49493971 -153591561 + THE1B LTR MaLR 1 364 0 288 386 0 41 chr5 49494767 49494912 -153590620 - MIR3 SINE MIR -3 205 67 1793 212 18 83 chr5 49495551 49495823 -153589709 + MLT2B1 LTR ERVL 1 289 -231 1686 131 106 4 chr5 49495823 49496098 -153589434 + AluSx SINE Alu 1 303 -9 1793 212 18 83 chr5 49496098 49496340 -153589192 + MLT2B1 LTR ERVL 289 479 -41 224 75 0 25 chr5 49496340 49496380 -153589152 + (TA)n Simple_repeat Simple_repeat 2 40 0 1793 212 18 83 chr5 49496380 49496420 -153589112 + MLT2B1 LTR ERVL 479 520 0 300 262 112 9 chr5 49496921 49497028 -153588504 + MLT1L LTR MaLR 150 267 -348 259 232 51 65 chr5 49497206 49497344 -153588188 + L1M4 LINE L1 1518 1755 -4889 381 274 30 30 chr5 49497391 49497526 -153588006 + L1M4 LINE L1 4511 4645 -1999 * 415 154 33 11 chr5 49497518 49497609 -153587923 + L1MC1 LINE L1 2136 2228 -4416 * 4365 229 71 14 chr5 49497603 49497806 -153587726 + L1MC1 LINE L1 2627 2817 -4014 2215 87 6 46 chr5 49497806 49498129 -153587403 + AluSx SINE Alu 1 310 -2 4365 229 71 14 chr5 49498129 49499453 -153586079 + L1MC1 LINE L1 2817 4063 -2768 1883 147 16 10 chr5 49499453 49499759 -153585773 + AluSx SINE Alu 1 308 -4 4365 229 71 14 chr5 49499759 49500035 -153585497 + L1MC1 LINE L1 4063 4322 -2509 204 40 0 0 chr5 49500035 49500060 -153585472 + (CA)n Simple_repeat Simple_repeat 2 26 0 4365 229 71 14 chr5 49500060 49500887 -153584645 + L1MC1 LINE L1 4322 5100 -1731 4365 154 23 24 chr5 49500887 49501427 -153584105 + L1MC1 LINE L1 6008 6548 -283 2254 70 0 3 chr5 49501427 49501711 -153583821 + AluY SINE Alu 20 302 -9 4365 154 23 24 chr5 49501711 49501995 -153583537 + L1MC1 LINE L1 6548 6831 0 4365 229 71 14 chr5 49501995 49502435 -153583097 + L1MC1 LINE L1 5100 6831 0 1524 317 55 16 chr5 49502731 49503500 -153582032 - L2 LINE L2 -152 3161 2363 567 316 48 19 chr5 49503501 49503710 -153581822 - L2 LINE L2 -1726 1588 1374 393 216 24 24 chr5 49503733 49503865 -153581667 + L1MC/D LINE L1 5600 5726 -428 1546 244 11 8 chr5 49504928 49505292 -153580240 + MLT1A1 LTR MaLR 1 365 0 538 286 58 75 chr5 49505442 49505750 -153579782 + LTR16A1 LTR ERVL 152 454 -3 777 289 58 43 chr5 49507568 49507914 -153577618 + MLT1J1 LTR MaLR 65 415 -31 495 334 190 12 chr5 49508552 49509038 -153576494 - L2 LINE L2 -7 3306 2736 874 158 0 0 chr5 49509058 49509191 -153576341 - AluJb SINE Alu -178 134 2 451 335 39 0 chr5 49509207 49509362 -153576170 - L2 LINE L2 -650 2664 2504 697 237 0 13 chr5 49509379 49509531 -153576001 - FAM SINE Alu 0 49 1 1750 289 54 11 chr5 49509847 49510369 -153575163 - MLT1H1 LTR MaLR -11 544 1 1369 207 160 12 chr5 49510385 49510728 -153574804 - MSTD LTR MaLR -2 394 1 2059 181 42 27 chr5 49511127 49511530 -153574002 + MLT2D LTR ERVL 3 422 -42 279 114 0 0 chr5 49511530 49511574 -153573958 + (CA)n Simple_repeat Simple_repeat 2 45 0 2059 181 42 27 chr5 49511574 49511618 -153573914 + MLT2D LTR ERVL 422 464 0 376 260 50 66 chr5 49511859 49512040 -153573492 + MER5B DNA MER1_type 1 178 0 234 0 0 0 chr5 49512748 49512774 -153572758 + (TTG)n Simple_repeat Simple_repeat 2 27 0 28 0 0 0 chr5 49514548 49514576 -153570956 + AT_rich Low_complexity Low_complexity 1 28 0 281 275 148 21 chr5 49515211 49515353 -153570179 - MER5A DNA MER1_type -18 166 1 32 0 0 0 chr5 49515441 49515473 -153570059 + AT_rich Low_complexity Low_complexity 1 32 0 544 248 58 0 chr5 49516476 49516613 -153568919 - MIR SINE MIR -26 236 92 383 178 0 0 chr5 49517423 49517496 -153568036 - MER53 DNA DNA -3 186 114 343 338 38 23 chr5 49517610 49517743 -153567789 - L2 LINE L2 0 3313 3179 21 0 0 0 chr5 49518168 49518189 -153567343 + AT_rich Low_complexity Low_complexity 1 21 0 2188 104 0 0 chr5 49518306 49518595 -153566937 + AluSq SINE Alu 1 289 -24 450 229 47 109 chr5 49518884 49519076 -153566456 + MIR3 SINE MIR 21 200 -8 * 453 300 143 32 chr5 49519042 49519449 -153566083 - L3 LINE CR1 -43 1534 1083 619 262 93 40 chr5 49519493 49519718 -153565814 - MIR SINE MIR -24 238 2 281 340 10 10 chr5 49519733 49519833 -153565699 - L3 LINE CR1 -504 1073 974 26 30 0 0 chr5 49519871 49519904 -153565628 + AT_rich Low_complexity Low_complexity 1 33 0 464 194 10 10 chr5 49520861 49520959 -153564573 + MER5A DNA MER1_type 9 106 -83 1386 175 48 8 chr5 49521155 49521407 -153564125 + AluJb SINE Alu 36 297 -15 401 301 70 52 chr5 49521453 49521682 -153563850 - MIR SINE MIR -7 255 23 187 333 0 0 chr5 49524942 49524996 -153560536 - MIR SINE MIR -72 136 83 414 79 0 0 chr5 49525016 49525079 -153560453 + (TG)n Simple_repeat Simple_repeat 2 64 0 491 349 101 17 chr5 49525931 49526229 -153559303 + MLT1I LTR MaLR 27 349 -60 393 344 43 21 chr5 49527571 49527757 -153557775 + MIR3 SINE MIR 13 202 -6 429 349 155 55 chr5 49528806 49528983 -153556549 - L2 LINE L2 -443 2871 2713 2643 184 11 2 chr5 49528983 49529446 -153556086 - MLT1C LTR MaLR 0 467 1 429 349 155 55 chr5 49529446 49530191 -153555341 - L2 LINE L2 -601 2713 1857 252 184 0 0 chr5 49533067 49533105 -153552427 - MER46C DNA MER2_type -10 328 291 471 113 0 0 chr5 49533106 49533177 -153552355 + (TA)n Simple_repeat Simple_repeat 1 71 0 615 307 40 15 chr5 49533438 49533640 -153551892 - MIR SINE MIR -55 207 1 886 73 28 34 chr5 49533869 49533893 -153551639 + (GAAA)n Simple_repeat Simple_repeat 1 200 0 886 73 28 34 chr5 49533893 49534071 -153551461 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 583 310 147 16 chr5 49535805 49536234 -153549298 - L1M4 LINE L1 -2748 3398 2914 30 27 0 0 chr5 49536238 49536275 -153549257 + AT_rich Low_complexity Low_complexity 1 37 0 225 300 40 7 chr5 49536617 49536767 -153548765 - L1M4 LINE L1 -3682 2464 2310 28 0 0 0 chr5 49537813 49537841 -153547691 + AT_rich Low_complexity Low_complexity 1 28 0 264 278 113 15 chr5 49538004 49538137 -153547395 - HAL1 LINE L1 -742 1765 1620 1757 190 45 3 chr5 49538163 49538495 -153547037 + MER7A DNA MER2_type 2 345 -1 2355 161 26 14 chr5 49538499 49538927 -153546605 - Tigger2a DNA MER2_type -1 433 1 231 261 109 11 chr5 49539116 49539208 -153546324 + L1MEd LINE L1 1111 1211 -4908 1584 153 121 103 chr5 49540007 49540543 -153544989 - LTR49 LTR ERV1 -49 546 1 10094 169 66 100 chr5 49540543 49542601 -153542931 - LTR49-int LTR ERV1 0 6331 4204 2195 113 0 3 chr5 49542601 49542892 -153542640 - AluSx SINE Alu -22 290 1 10094 169 66 100 chr5 49542892 49544113 -153541419 - LTR49-int LTR ERV1 -2127 4204 1706 24 67 0 0 chr5 49545068 49545113 -153540419 + AT_rich Low_complexity Low_complexity 1 45 0 862 208 121 42 chr5 49545144 49545433 -153540099 - LTR49-int LTR ERV1 -5043 1288 977 1635 181 92 87 chr5 49545731 49546274 -153539258 - LTR49 LTR ERV1 -49 546 1 2322 168 15 8 chr5 49546426 49546819 -153538713 - MER61B LTR ERV1 -29 396 1 21045 114 24 11 chr5 49546819 49550016 -153535516 - MER61B-int LTR ERV1 0 5217 1978 1722 109 18 4 chr5 49550001 49550277 -153535255 - MER61B-int LTR ERV1 -3577 1640 1361 * 270 128 0 0 chr5 49550270 49550309 -153535223 - HUERS-P3b LTR ERV1 -3996 3422 3384 * 1910 111 102 50 chr5 49550306 49550668 -153534864 - HUERS-P3b LTR ERV1 -4370 847 467 296 256 44 22 chr5 49551069 49551159 -153534373 - HUERS-P3b LTR ERV1 -5125 92 1 2447 144 10 10 chr5 49551172 49551567 -153533965 - MER61B LTR ERV1 -30 395 1 1368 265 99 14 chr5 49551569 49551991 -153533541 + MER39 LTR ERV1 250 707 0 231 250 56 14 chr5 49552022 49552094 -153533438 + MIR3 SINE MIR 83 157 -51 308 280 27 0 chr5 49552560 49552635 -153532897 + MER91C DNA MER1_type 1 77 -63 2502 169 35 11 chr5 49552850 49553387 -153532145 - L1MA10 LINE L1 -2 6332 5783 358 304 34 83 chr5 49553811 49554077 -153531455 + MIR SINE MIR 9 261 -1 389 275 48 21 chr5 49554394 49554583 -153530949 - L1ME1 LINE L1 -5 6161 5968 704 202 108 9 chr5 49554628 49554851 -153530681 - L1M4 LINE L1 -3699 2945 2701 5367 136 11 0 chr5 49554852 49555955 -153529577 - L1PA15 LINE L1 -1 6815 5700 13039 256 52 13 chr5 49555957 49556640 -153528892 - L1PA15 LINE L1 -1241 5556 4901 1872 148 7 3 chr5 49556640 49556946 -153528586 + AluSx SINE Alu 1 307 0 13039 256 52 13 chr5 49556946 49559807 -153525725 - L1PA15 LINE L1 -1896 4901 2154 2190 85 3 60 chr5 49559807 49560126 -153525406 + AluSp SINE Alu 1 301 -12 13039 256 52 13 chr5 49560126 49560547 -153524985 - L1PA15 LINE L1 -4643 2154 1751 269 26 26 0 chr5 49560547 49560585 -153524947 + (CAG)n Simple_repeat Simple_repeat 1 39 0 13039 256 52 13 chr5 49560585 49561673 -153523859 - L1PA15 LINE L1 -5046 1751 1 358 283 78 51 chr5 49561865 49562338 -153523194 - L1M4 LINE L1 -4135 2690 2205 1159 288 100 30 chr5 49562381 49563379 -153522153 - L1M4 LINE L1 -4715 1931 875 2308 92 0 0 chr5 49563380 49563700 -153521832 - AluY SINE Alu 0 320 1 1827 179 74 12 chr5 49564115 49564533 -153520999 - LTR56 LTR ERV1 0 445 2 7542 197 49 43 chr5 49564661 49565273 -153520259 - LTR56-int LTR ERV1 -265 6146 5539 2200 127 47 8 chr5 49565273 49565634 -153519898 - THE1C LTR MaLR 0 375 1 7542 197 49 43 chr5 49565634 49567343 -153518189 - LTR56-int LTR ERV1 -872 5539 2191 1180 268 12 0 chr5 49567384 49567638 -153517894 - AluJo SINE Alu -55 257 1 6321 199 52 61 chr5 49567646 49568573 -153516959 - LTR49-int LTR ERV1 -2736 3595 2690 1988 137 7 7 chr5 49568573 49568872 -153516660 + AluSx SINE Alu 1 299 -13 6321 199 52 61 chr5 49568872 49569676 -153515856 - LTR49-int LTR ERV1 -3641 2690 1880 1580 145 19 54 chr5 49569673 49569990 -153515542 - LTR49-int LTR ERV1 -4673 1658 1353 * 341 188 40 40 chr5 49570095 49570196 -153515336 - LTR49-int LTR ERV1 -4949 1382 1282 376 242 0 0 chr5 49570198 49570264 -153515268 - tRNA-Glu-GAG tRNA tRNA -3 72 7 301 190 17 0 chr5 49570323 49570381 -153515151 - LTR49-int LTR ERV1 -5150 1181 1123 669 101 0 10 chr5 49570541 49570640 -153514892 + MER4A LTR ERV1 1 98 -566 1701 134 158 78 chr5 49570640 49571014 -153514518 + MER4A LTR ERV1 261 664 0 4000 97 18 5 chr5 49571688 49572246 -153513286 + MER61E LTR ERV1 1 565 -4 2043 132 84 14 chr5 49572881 49573297 -153512235 - LTR56 LTR ERV1 0 445 1 2119 93 7 32 chr5 49573690 49574000 -153511532 + AluSc SINE Alu 1 302 -7 187 354 42 10 chr5 49574024 49574120 -153511412 + MIR SINE MIR 73 171 -91 22 0 0 0 chr5 49574995 49575017 -153510515 + AT_rich Low_complexity Low_complexity 1 22 0 645 99 0 11 chr5 49575331 49575422 -153510110 - MER41C LTR ERV1 -464 90 1 5334 86 51 4 chr5 49575658 49576403 -153509129 + LTR17 LTR ERV1 1 780 0 356 285 32 114 chr5 49576541 49576787 -153508745 - MIR SINE MIR 0 262 37 35 0 0 0 chr5 49577445 49577480 -153508052 + AT_rich Low_complexity Low_complexity 1 35 0 259 366 0 0 chr5 49577858 49577940 -153507592 - L2 LINE L2 -1 3271 3190 294 215 0 51 chr5 49578057 49578136 -153507396 + MIR3 SINE MIR 82 156 -52 29 47 0 0 chr5 49578420 49578463 -153507069 + AT_rich Low_complexity Low_complexity 1 43 0 602 186 97 0 chr5 49578507 49578620 -153506912 + FLAM_C SINE Alu 1 124 -19 200 390 0 0 chr5 49579582 49579659 -153505873 - L3 LINE CR1 -58 1519 1443 386 317 24 16 chr5 49579850 49579973 -153505559 - MIR SINE MIR -73 189 66 316 312 126 22 chr5 49580198 49580429 -153505103 + MIR SINE MIR 8 262 0 194 343 185 0 chr5 49580472 49580618 -153504914 - L3 LINE CR1 -340 1237 1065 279 301 201 30 chr5 49580773 49581102 -153504430 - L3 LINE CR1 -632 945 561 182 234 39 13 chr5 49582266 49582343 -153503189 + L3b LINE CR1 1113 1191 -392 233 267 67 0 chr5 49582351 49582426 -153503106 - MLT1G LTR MaLR -16 574 495 384 296 13 26 chr5 49582595 49582747 -153502785 - MLT1H LTR MaLR -380 169 20 2202 101 3 10 chr5 49583430 49583726 -153501806 - AluY SINE Alu -17 294 1 22 94 0 0 chr5 49584513 49584577 -153500955 + AT_rich Low_complexity Low_complexity 1 64 0 1110 243 241 109 chr5 49584803 49585768 -153499764 + MER52A LTR ERV1 663 1755 0 22 35 0 0 chr5 49585793 49585822 -153499710 + AT_rich Low_complexity Low_complexity 1 29 0 299 280 203 0 chr5 49585879 49585997 -153499535 - MIR SINE MIR -119 143 2 4524 172 51 7 chr5 49586391 49586458 -153499074 - MER6 DNA MER2_type 0 865 802 1337 133 55 0 chr5 49586458 49586676 -153498856 + MER30 DNA MER1_type 1 230 0 4524 172 51 7 chr5 49586676 49587435 -153498097 - MER6 DNA MER2_type -63 802 3 848 168 95 16 chr5 49593527 49593717 -153491815 + MER3 DNA MER1_type 1 205 -4 21 36 0 0 chr5 49595259 49595287 -153490245 + AT_rich Low_complexity Low_complexity 1 28 0 746 269 22 11 chr5 49595480 49595662 -153489870 - MIR SINE MIR -53 209 26 2473 141 91 6 chr5 49596030 49596757 -153488775 + LTR1B LTR ERV1 1 826 0 5318 211 40 65 chr5 49596812 49598099 -153487433 + MLT-int LTR MaLR 481 1735 0 1487 194 22 22 chr5 49598167 49598486 -153487046 - L1 LINE L1 -1812 4334 4016 182 262 24 0 chr5 49598950 49598992 -153486540 + L2 LINE L2 3221 3263 -9 2268 91 0 3 chr5 49600563 49600861 -153484671 + AluSc SINE Alu 1 297 -12 235 282 82 0 chr5 49600890 49600975 -153484557 + MIR SINE MIR 63 154 -108 245 200 120 13 chr5 49601114 49601189 -153484343 - MIR SINE MIR -85 177 95 376 289 63 59 chr5 49602487 49602726 -153482806 - Charlie8 DNA MER1_type -2177 240 1 24 32 0 0 chr5 49603161 49603192 -153482340 + AT_rich Low_complexity Low_complexity 1 31 0 191 232 134 98 chr5 49603229 49603341 -153482191 - MIR SINE MIR -82 180 65 238 356 87 0 chr5 49603658 49603773 -153481759 - MIR3 SINE MIR 0 208 84 24 0 0 0 chr5 49603808 49603832 -153481700 + AT_rich Low_complexity Low_complexity 1 24 0 1651 160 185 14 chr5 49603876 49604238 -153481294 + MSTA LTR MaLR 1 424 -4 247 288 162 9 chr5 49604666 49604777 -153480755 - MIR SINE MIR -77 185 58 277 373 112 12 chr5 49607734 49607903 -153477629 + MER5A DNA MER1_type 2 187 -2 240 295 74 11 chr5 49607998 49608093 -153477439 + L2 LINE L2 3191 3291 -22 425 292 136 40 chr5 49608739 49609040 -153476492 - L1ME4a LINE L1 -150 6389 6060 508 268 211 24 chr5 49609054 49609267 -153476265 - MIR SINE MIR 0 262 10 239 301 85 20 chr5 49609867 49610020 -153475512 - L1ME4a LINE L1 -1909 4655 4493 235 352 83 9 chr5 49610090 49610198 -153475334 - L2 LINE L2 -1 3312 3197 817 268 121 57 chr5 49610302 49610805 -153474727 - L1ME4a LINE L1 -2428 4136 3667 1939 179 0 0 chr5 49610805 49611117 -153474415 - AluJb SINE Alu 0 312 1 817 268 121 57 chr5 49611117 49611869 -153473663 - L1ME4a LINE L1 -2897 3667 2800 351 209 73 18 chr5 49611880 49611990 -153473542 + MER77 LTR ERV1 443 558 -47 434 220 82 82 chr5 49612002 49612161 -153473371 - MLT1D LTR MaLR -258 247 89 962 228 43 48 chr5 49612216 49613476 -153472056 - L1ME4a LINE L1 -5142 903 1 544 283 71 5 chr5 49613523 49613735 -153471797 - L1MEc LINE L1 -3400 3448 3223 * 1079 247 82 16 chr5 49613728 49614181 -153471351 - L1MEc LINE L1 -4160 2869 2387 2051 107 4 0 chr5 49614226 49614506 -153471026 - AluSc SINE Alu -28 281 1 237 250 133 39 chr5 49614508 49614636 -153470896 - L1MEc LINE L1 -4312 2537 2398 1177 150 34 39 chr5 49614776 49614983 -153470549 + AluJb SINE Alu 88 293 -19 566 297 116 7 chr5 49614983 49615407 -153470125 - L1MEc LINE L1 -5101 1747 1278 780 26 0 80 chr5 49615420 49615533 -153469999 - L1PA2 LINE L1 0 6155 6052 811 272 59 95 chr5 49616469 49617198 -153468334 - L1MC4 LINE L1 -3 8039 7236 5931 144 9 29 chr5 49617570 49618086 -153467446 - L1PB1 LINE L1 -5 6146 5621 4125 77 108 46 chr5 49618086 49618734 -153466798 + LTR12 LTR ERV1 1 688 0 5931 144 9 29 chr5 49618734 49619805 -153465727 - L1PB1 LINE L1 -530 5621 4597 288 126 39 48 chr5 49619931 49620034 -153465498 + GA-rich Low_complexity Low_complexity 1 102 0 341 301 28 42 chr5 49620393 49620536 -153464996 - MARNA DNA Mariner -203 383 243 1733 176 0 16 chr5 49620932 49621239 -153464293 - AluJo SINE Alu -10 302 1 296 290 84 38 chr5 49621339 49621470 -153464062 - L2 LINE L2 -5 3308 3172 250 241 11 35 chr5 49621602 49621689 -153463843 - MIR3 SINE MIR -15 193 109 700 297 53 58 chr5 49621826 49621872 -153463660 - LTR16C LTR ERVL -14 477 432 1552 170 50 18 chr5 49621872 49622154 -153463378 - AluJo SINE Alu -21 291 1 700 297 53 58 chr5 49622154 49622487 -153463045 - LTR16C LTR ERVL -59 432 100 199 77 26 26 chr5 49623196 49623235 -153462297 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 207 174 0 145 chr5 49623590 49623659 -153461873 + MIR3 SINE MIR 108 166 -42 26 50 0 0 chr5 49624813 49624853 -153460679 + AT_rich Low_complexity Low_complexity 1 40 0 2258 65 41 3 chr5 49625318 49625612 -153459920 + AluY SINE Alu 1 305 -6 365 282 101 34 chr5 49625635 49625784 -153459748 - MIR3 SINE MIR -41 167 9 192 336 124 9 chr5 49628747 49628860 -153456672 + L2 LINE L2 3107 3232 -40 428 314 92 0 chr5 49629307 49629460 -153456072 + MIR3 SINE MIR 36 202 -6 194 250 44 15 chr5 49629569 49629637 -153455895 - MIR3 SINE MIR -29 179 110 251 322 70 35 chr5 49629978 49630093 -153455439 + L3 LINE CR1 25 143 -1434 301 303 30 10 chr5 49630253 49630352 -153455180 - MIR3 SINE MIR -5 203 103 2541 149 31 2 chr5 49631138 49631554 -153453978 + MSTC LTR MaLR 1 428 0 6235 87 19 8 chr5 49632220 49633335 -153452197 + L1PA10 LINE L1 5067 6167 -1 254 143 20 0 chr5 49634654 49634703 -153450829 + CT-rich Low_complexity Low_complexity 2 51 0 351 0 0 0 chr5 49634704 49634743 -153450789 + (TG)n Simple_repeat Simple_repeat 2 40 0 219 83 0 28 chr5 49634788 49634824 -153450708 + MER5B DNA MER1_type 64 98 -80 2016 108 20 7 chr5 49634966 49635262 -153450270 - AluSq SINE Alu -13 300 1 1779 300 57 63 chr5 49635327 49636313 -153449219 + L2 LINE L2 674 1653 -1661 5069 197 50 27 chr5 49686316 49687630 -153397902 + L1PA13 LINE L1 1239 2585 -4212 180 0 0 0 chr5 49687731 49687751 -153397781 + (A)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr5 49688126 49688161 -153397371 + AT_rich Low_complexity Low_complexity 1 35 0 1355 79 28 28 chr5 49688679 49688895 -153396637 + AluY SINE Alu 1 216 -95 344 303 144 35 chr5 49689369 49689653 -153395879 + L1MC/D LINE L1 5254 5568 -2240 1856 153 14 0 chr5 49689653 49689969 -153395563 - AluSq SINE Alu 0 320 1 5488 132 19 9 chr5 49689994 49690893 -153394639 - L1PA13 LINE L1 -2 6161 5254 935 249 20 0 chr5 49691147 49691348 -153394184 + MER58A DNA MER1_type 2 206 -18 215 392 0 13 chr5 49691447 49691526 -153394006 - MIR SINE MIR -183 79 2 1448 266 62 18 chr5 49693411 49693863 -153391669 + LTR40a LTR ERVL 1 472 -47 180 0 0 0 chr5 49694287 49694307 -153391225 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1142 112 0 6 chr5 49694822 49694883 -153390649 + (GAAA)n Simple_repeat Simple_repeat 1 238 0 1142 112 0 6 chr5 49694883 49695062 -153390470 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2050 123 0 13 chr5 49695350 49695651 -153389881 + AluSx SINE Alu 5 301 -11 195 162 0 0 chr5 49695985 49696022 -153389510 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 251 269 0 43 chr5 49696262 49696305 -153389227 - MIR SINE MIR -66 196 153 1308 189 35 62 chr5 49696305 49696589 -153388943 - MLT1A1 LTR MaLR -2 363 90 1622 168 42 0 chr5 49696589 49696874 -153388658 - AluJb SINE Alu -15 297 1 1308 189 35 62 chr5 49696874 49696960 -153388572 - MLT1A1 LTR MaLR -275 90 3 251 269 0 43 chr5 49696960 49697009 -153388523 - MIR SINE MIR -109 153 108 21 57 0 0 chr5 49698683 49698718 -153386814 + AT_rich Low_complexity Low_complexity 1 35 0 4548 143 52 13 chr5 49699758 49700553 -153384979 + LTR1B LTR ERV1 1 826 0 355 339 87 10 chr5 49700857 49701052 -153384480 + MIR SINE MIR 11 220 -42 191 336 0 37 chr5 49701133 49701240 -153384292 + L2 LINE L2 1948 2050 -1264 2526 83 0 83 chr5 49701243 49701654 -153383878 - MER51B LTR ERV1 0 377 1 566 317 151 8 chr5 49701657 49701916 -153383616 + L2 LINE L2 2679 2974 -340 877 190 4 106 chr5 49701968 49702194 -153383338 - MER20 DNA MER1_type 0 219 17 222 366 30 38 chr5 49702591 49702722 -153382810 - L2 LINE L2 -7 3265 3136 1379 152 89 28 chr5 49702924 49703446 -153382086 + LTR36 LTR ERV1 2 611 0 201 176 0 0 chr5 49703447 49703481 -153382051 + (TA)n Simple_repeat Simple_repeat 2 35 0 545 252 81 0 chr5 49703785 49703908 -153381624 - MER58A DNA MER1_type 0 133 1 31 0 0 0 chr5 49705548 49705579 -153379953 + AT_rich Low_complexity Low_complexity 1 31 0 926 238 47 49 chr5 49706230 49706637 -153378895 + L1M4 LINE L1 4909 5314 -832 1650 271 61 63 chr5 49706654 49707322 -153378210 + L1MC4 LINE L1 6800 7467 -575 5788 103 40 0 chr5 49707322 49708253 -153377279 - L1PB1 LINE L1 0 6151 5222 1650 271 61 63 chr5 49708253 49708388 -153377144 + L1MC4 LINE L1 7467 7601 -441 619 292 82 34 chr5 49708636 49709518 -153376014 + L1ME LINE L1 548 1483 -4597 2185 221 62 113 chr5 49709530 49710826 -153374706 + L1M4 LINE L1 3477 4706 -1440 333 327 193 0 chr5 49711280 49711430 -153374102 - MER5A DNA MER1_type -1 188 10 866 198 97 0 chr5 49713585 49713812 -153371720 + L1MCa LINE L1 1266 1514 -4912 1536 115 47 24 chr5 49713832 49714085 -153371447 + MER1B DNA MER1_type 80 338 -1 787 314 68 28 chr5 49714087 49714650 -153370882 + L1MCa LINE L1 1697 2281 -4326 311 275 0 0 chr5 49714741 49714810 -153370722 - LTR16B LTR ERVL -395 69 1 208 304 0 0 chr5 49714813 49714869 -153370663 + (TG)n Simple_repeat Simple_repeat 1 56 0 229 278 56 44 chr5 49714940 49715030 -153370502 + L2 LINE L2 3191 3281 -32 652 159 16 8 chr5 49715049 49715175 -153370357 + L1MB8 LINE L1 6051 6177 -1 2011 121 7 0 chr5 49715583 49715863 -153369669 - AluSx SINE Alu -30 282 1 21 36 0 0 chr5 49717532 49717560 -153367972 + AT_rich Low_complexity Low_complexity 1 28 0 300 299 85 37 chr5 49717771 49718151 -153367381 - L2 LINE L2 -1078 2236 1867 317 299 124 34 chr5 49718870 49719047 -153366485 + MIR SINE MIR 14 206 -56 1218 244 76 15 chr5 49720445 49720804 -153364728 - MLT1E2 LTR MaLR 0 626 206 1911 222 22 10 chr5 49720804 49721468 -153364064 + MER49 LTR ERV1 1 923 0 695 262 93 13 chr5 49721502 49721727 -153363805 - MLT1E2 LTR MaLR -401 253 11 25 0 0 0 chr5 49721736 49721761 -153363771 + AT_rich Low_complexity Low_complexity 1 25 0 2064 160 10 0 chr5 49722155 49722467 -153363065 + 7SLRNA srpRNA srpRNA 2 316 -4 536 136 17 17 chr5 49722470 49722588 -153362944 + GA-rich Low_complexity Low_complexity 4 121 0 263 114 68 0 chr5 49722711 49722755 -153362777 - L1P LINE L1 -969 5177 5131 * 3035 181 32 5 chr5 49722752 49723349 -153362183 + L1P LINE L1 4482 5094 -1052 571 316 51 12 chr5 49723364 49723617 -153361915 + L1MC4a LINE L1 5594 5856 -1952 243 188 71 82 chr5 49724125 49724191 -153361341 - MER103 DNA DNA -64 102 36 1964 175 24 19 chr5 49724191 49724563 -153360969 - THE1C LTR MaLR 0 375 2 243 188 71 82 chr5 49724563 49724581 -153360951 - MER103 DNA DNA -130 36 19 1206 256 97 72 chr5 49726489 49727332 -153358200 + L1ME3A LINE L1 5254 6117 -53 28 71 0 0 chr5 49727381 49727437 -153358095 + AT_rich Low_complexity Low_complexity 1 56 0 282 106 0 0 chr5 49727983 49728030 -153357502 + (TC)n Simple_repeat Simple_repeat 1 47 0 23 0 0 0 chr5 49728317 49728340 -153357192 + AT_rich Low_complexity Low_complexity 1 23 0 803 224 113 14 chr5 49729107 49729407 -153356125 - MLT1A2 LTR MaLR 0 374 1 203 179 0 0 chr5 49730035 49730074 -153355458 + A-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr5 49730415 49730446 -153355086 + AT_rich Low_complexity Low_complexity 1 31 0 4637 94 5 81 chr5 49730592 49731380 -153354152 - L1PA14 LINE L1 0 6161 5434 23 0 0 0 chr5 49732001 49732024 -153353508 + AT_rich Low_complexity Low_complexity 1 23 0 1175 195 52 57 chr5 49733643 49734012 -153351520 - L1MA9 LINE L1 -44 6268 5902 27 0 0 0 chr5 49736491 49736518 -153349014 + AT_rich Low_complexity Low_complexity 1 27 0 2587 103 11 0 chr5 49736724 49737084 -153348448 + THE1B LTR MaLR 1 364 0 3922 188 53 3 chr5 49737245 49737959 -153347573 + MER21B LTR ERV1 1 750 -113 1465 202 183 16 chr5 49738301 49738732 -153346800 + MLT1D LTR MaLR 1 503 -2 283 264 42 28 chr5 49739352 49739452 -153346080 + MLT1H1 LTR MaLR 149 324 -271 452 205 113 8 chr5 49739586 49739736 -153345796 + MLT1H1 LTR MaLR 375 555 0 247 308 9 19 chr5 49739736 49739843 -153345689 + MLT1H1-int LTR MaLR 1 106 -1629 35445 34 2 6 chr5 49739873 49744858 -153340674 + L1PA4 LINE L1 1011 5976 -179 304 266 89 65 chr5 49745228 49745397 -153340135 + MLT1H LTR MaLR 360 532 -17 1875 127 71 0 chr5 49746151 49746434 -153339098 - AluSg1 SINE Alu -4 305 3 535 253 158 6 chr5 49746727 49746885 -153338647 - MER5A DNA MER1_type -1 188 7 22 0 0 0 chr5 49747345 49747367 -153338165 + AT_rich Low_complexity Low_complexity 1 22 0 1917 130 81 26 chr5 49747629 49747974 -153337558 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr5 49748021 49748044 -153337488 + AT_rich Low_complexity Low_complexity 1 23 0 196 153 51 29 chr5 49752028 49752165 -153333367 + (TA)n Simple_repeat Simple_repeat 2 141 0 1934 89 0 4 chr5 49752170 49752417 -153333115 - AluSc SINE Alu -63 246 1 228 289 0 0 chr5 49752504 49752556 -153332976 + (CA)n Simple_repeat Simple_repeat 1 52 0 660 297 136 39 chr5 49752662 49753022 -153332510 + L3 LINE CR1 1021 1415 -162 298 340 28 35 chr5 49753035 49753176 -153332356 - MIR3 SINE MIR -11 197 58 21 36 0 0 chr5 49754040 49754068 -153331464 + AT_rich Low_complexity Low_complexity 1 28 0 6691 130 29 10 chr5 49754422 49755762 -153329770 - L1MA2 LINE L1 0 6304 4932 674 298 32 20 chr5 49755988 49756236 -153329296 - MIR SINE MIR 0 262 12 21 0 0 0 chr5 49756640 49756661 -153328871 + AT_rich Low_complexity Low_complexity 1 21 0 198 191 0 0 chr5 49756697 49756739 -153328793 + (TG)n Simple_repeat Simple_repeat 1 42 0 654 273 97 33 chr5 49757146 49758018 -153327514 + L1ME1 LINE L1 4933 5947 -219 197 289 178 20 chr5 49758326 49758478 -153327054 + L2 LINE L2 2637 2812 -502 2103 102 0 4 chr5 49758750 49759024 -153326508 + AluSq SINE Alu 4 276 -37 229 103 51 64 chr5 49759028 49759106 -153326426 + GA-rich Low_complexity Low_complexity 2 78 0 474 308 174 4 chr5 49759127 49759403 -153326129 - L1ME4a LINE L1 -50 6071 5749 401 125 11 0 chr5 49759407 49759495 -153326037 + (TA)n Simple_repeat Simple_repeat 1 89 0 324 0 0 0 chr5 49759887 49759923 -153325609 + (TG)n Simple_repeat Simple_repeat 2 37 0 396 236 73 45 chr5 49760731 49760909 -153324623 + MER96B DNA MER1_type? 230 412 -5 211 341 153 18 chr5 49761411 49761634 -153323898 + L3 LINE CR1 714 966 -611 1909 250 21 5 chr5 49761684 49762170 -153323362 - MER77 LTR ERV1 0 605 56 201 74 0 0 chr5 49762170 49762197 -153323335 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1909 250 21 5 chr5 49762197 49762254 -153323278 - MER77 LTR ERV1 -549 56 1 385 269 128 20 chr5 49762254 49762399 -153323133 - MLT1L LTR MaLR -120 495 335 322 287 53 47 chr5 49762492 49762642 -153322890 - MLT1L LTR MaLR -464 151 1 458 252 7 56 chr5 49763238 49763313 -153322219 - MIR SINE MIR -126 136 70 4156 122 8 6 chr5 49763313 49763947 -153321585 - MER41B LTR ERV1 0 635 1 458 252 7 56 chr5 49763947 49764014 -153321518 - MIR SINE MIR -192 70 1 2050 133 3 0 chr5 49764110 49764404 -153321128 - AluSq SINE Alu -18 295 1 488 133 48 0 chr5 49764516 49764599 -153320933 - MER34C LTR ERV1 0 585 499 619 141 0 10 chr5 49764599 49764698 -153320834 + MER4A LTR ERV1 1 98 -566 * 924 164 27 25 chr5 49764694 49764922 -153320610 + MER4A LTR ERV1 257 543 -121 3393 138 34 2 chr5 49764924 49765460 -153320072 - MER41C LTR ERV1 -1 553 1 12426 112 29 6 chr5 49765460 49767696 -153317836 - MER41C-int LTR ERV1 0 5946 2856 2013 142 54 37 chr5 49767683 49768265 -153317267 - MER41-int LTR ERV1 -4057 3759 1081 * 599 133 124 9 chr5 49768256 49768369 -153317163 - MER41-int LTR ERV1 -5321 625 500 * 3603 115 0 2 chr5 49768369 49768881 -153316651 + MER9 LTR ERVK 1 511 0 4254 76 5 24 chr5 49768881 49769460 -153316072 + HERVK9 LTR ERVK 1 568 -5348 13516 62 1 1 chr5 49769461 49771136 -153314396 + HERVK9 LTR ERVK 1113 2786 -3130 1806 61 4 0 chr5 49771136 49771366 -153314166 + HERVK9 LTR ERVK 3711 3941 -1975 * 7564 98 3 16 chr5 49771353 49772431 -153313101 + HERVK9 LTR ERVK 4571 5634 -282 2248 126 13 12 chr5 49772456 49772809 -153312723 + HERVK9 LTR ERVK 5635 5916 0 3685 94 4 6 chr5 49772809 49773321 -153312211 + MER9 LTR ERVK 1 511 0 315 118 20 0 chr5 49773321 49773372 -153312160 - MER41-int LTR ERV1 -5441 505 454 865 129 17 17 chr5 49773496 49773674 -153311858 + GA-rich Low_complexity Low_complexity 3 180 0 919 207 6 0 chr5 49774892 49775061 -153310471 + AluJo SINE Alu 113 282 -30 23 0 0 0 chr5 49775061 49775084 -153310448 + AT_rich Low_complexity Low_complexity 1 23 0 360 269 50 42 chr5 49775155 49775274 -153310258 - MIR SINE MIR -123 139 20 396 0 0 0 chr5 49775965 49776009 -153309523 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 947 104 8 0 chr5 49776009 49776134 -153309398 - AluSg SINE Alu -184 126 1 449 265 77 33 chr5 49776640 49776821 -153308711 - LTR67 LTR ERVL -15 542 354 507 345 98 23 chr5 49777416 49777976 -153307556 - ERVL LTR ERVL -2973 2791 2190 279 0 0 0 chr5 49779173 49779204 -153306328 + (TG)n Simple_repeat Simple_repeat 2 32 0 243 204 0 0 chr5 49779534 49779588 -153305944 + (TA)n Simple_repeat Simple_repeat 1 54 0 1432 149 97 45 chr5 49779641 49779929 -153305603 + AluJo SINE Alu 1 303 -9 2090 110 13 20 chr5 49782676 49782975 -153302557 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr5 49783025 49783055 -153302477 + AT_rich Low_complexity Low_complexity 1 30 0 2039 108 49 0 chr5 49785527 49785813 -153299719 + AluSg SINE Alu 1 300 -10 30 0 0 0 chr5 49785860 49785890 -153299642 + AT_rich Low_complexity Low_complexity 1 30 0 4078 188 34 17 chr5 49786058 49786826 -153298706 - LTR39 LTR ERV1 -2 781 1 262 331 57 100 chr5 49786870 49787151 -153298381 - L2 LINE L2 0 3272 3004 22 0 0 0 chr5 49787194 49787216 -153298316 + AT_rich Low_complexity Low_complexity 1 22 0 6878 72 0 0 chr5 49787371 49787401 -153298131 - L1PA8 LINE L1 -3 6169 6140 8312 51 1 0 chr5 49787401 49788366 -153297166 - LTR5 LTR ERVK -3 966 1 6878 72 0 0 chr5 49788366 49789378 -153296154 - L1PA8 LINE L1 -31 6141 5137 2839 109 2 0 chr5 49789378 49789799 -153295733 + L1PA8 LINE L1 4716 5137 -1009 194 208 21 21 chr5 49789840 49789888 -153295644 + MIR SINE MIR 95 142 -120 2206 110 0 10 chr5 49790450 49790751 -153294781 + AluSq SINE Alu 1 298 -15 624 153 0 16 chr5 49791755 49791938 -153293594 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr5 49792040 49792068 -153293464 + AT_rich Low_complexity Low_complexity 1 28 0 434 200 21 0 chr5 49792132 49792227 -153293305 - MLT1F LTR MaLR -2 540 444 314 182 56 14 chr5 49792230 49792373 -153293159 + (TA)n Simple_repeat Simple_repeat 1 149 0 780 299 74 0 chr5 49792638 49792882 -153292650 - LTR16C LTR ERVL -5 486 225 316 262 154 5 chr5 49793240 49793461 -153292071 + L1M4 LINE L1 3697 3950 -2196 971 237 19 0 chr5 49793551 49793758 -153291774 - MLT1F1 LTR MaLR -2 565 355 216 67 0 0 chr5 49793814 49793844 -153291688 + (CA)n Simple_repeat Simple_repeat 1 30 0 1452 136 33 16 chr5 49794168 49794411 -153291121 - MER41C-int LTR ERV1 -5698 248 2 3087 143 55 0 chr5 49794497 49795022 -153290510 - MER41C LTR ERV1 0 554 1 799 151 0 16 chr5 49795022 49795148 -153290384 + MER4A LTR ERV1 541 664 0 2019 158 98 60 chr5 49795148 49795629 -153289903 - MER34C LTR ERV1 -83 502 4 2266 210 24 25 chr5 49795964 49796474 -153289058 - LTR22 LTR ERVK 0 509 1 29 47 0 0 chr5 49796640 49796683 -153288849 + AT_rich Low_complexity Low_complexity 1 43 0 2008 197 66 32 chr5 49798219 49798731 -153286801 + MER41B LTR ERV1 108 477 -9 325 274 72 91 chr5 49799090 49799181 -153286351 + L1ME LINE L1 5299 5390 -772 2167 141 0 35 chr5 49799181 49799529 -153286003 + MER1B DNA MER1_type 2 337 0 325 274 72 91 chr5 49799529 49799700 -153285832 + L1ME LINE L1 5390 5556 -606 1955 169 0 3 chr5 49799797 49800093 -153285439 - AluSx SINE Alu -17 295 1 1415 202 16 0 chr5 49800869 49801122 -153284410 + AluJo SINE Alu 5 261 -51 201 74 0 0 chr5 49801186 49801213 -153284319 + (TC)n Simple_repeat Simple_repeat 2 28 0 199 111 22 22 chr5 49801212 49801257 -153284275 + (TA)n Simple_repeat Simple_repeat 2 46 0 * 263 261 134 25 chr5 49803572 49803691 -153281841 + MIR SINE MIR 20 151 -111 261 286 14 0 chr5 49803776 49803846 -153281686 - MIR SINE MIR -53 209 139 472 189 60 58 chr5 49804045 49804319 -153281213 - MER20B DNA MER1_type -5 778 474 1806 189 34 5 chr5 49804394 49804781 -153280751 - L1MD1 LINE L1 0 6242 5845 676 154 56 28 chr5 49804796 49804939 -153280593 - L1MD1 LINE L1 -590 5769 5623 513 285 55 32 chr5 49804943 49805316 -153280216 - L1MD1 LINE L1 -1005 5141 4640 193 242 0 137 chr5 49805330 49805454 -153280078 + MIR SINE MIR 137 243 -19 762 292 72 36 chr5 49805945 49806250 -153279282 + L2 LINE L2 2996 3311 -2 916 305 78 41 chr5 49806586 49806730 -153278802 + L2 LINE L2 2545 2682 -631 1237 241 65 17 chr5 49806730 49807083 -153278449 + MLT1A2 LTR MaLR 1 370 -4 916 305 78 41 chr5 49807083 49807678 -153277854 + L2 LINE L2 2682 3308 -5 322 245 168 42 chr5 49807678 49807821 -153277711 + MIR3 SINE MIR 28 188 -20 195 379 136 0 chr5 49808569 49808672 -153276860 - L2 LINE L2 -10 3262 3146 231 114 0 0 chr5 49809730 49809765 -153275767 + (CCCGAA)n Simple_repeat Simple_repeat 4 38 0 385 344 28 56 chr5 49810498 49810713 -153274819 - MIR SINE MIR -4 258 50 23 0 0 0 chr5 49810787 49810810 -153274722 + AT_rich Low_complexity Low_complexity 1 23 0 953 207 15 10 chr5 49811983 49812181 -153273351 - MER58A DNA MER1_type 0 224 26 669 286 105 70 chr5 49814087 49814612 -153270920 - L2 LINE L2 -1 3312 2764 1889 157 0 3 chr5 49815938 49816237 -153269295 + AluSx SINE Alu 1 298 -14 264 302 93 0 chr5 49816448 49816534 -153268998 + L2 LINE L2 3217 3310 -3 2155 109 10 16 chr5 49816602 49816905 -153268627 - AluSp SINE Alu -12 301 1 607 331 93 22 chr5 49817151 49817507 -153268025 + L2 LINE L2 1844 2224 -1090 1930 205 14 6 chr5 49817949 49818305 -153267227 + MLT1A1 LTR MaLR 7 365 0 576 244 57 52 chr5 49819524 49819717 -153265815 + Charlie8 DNA MER1_type 72 265 -2152 1676 139 68 7 chr5 49820111 49820391 -153265141 - AluSx SINE Alu -15 297 1 1178 233 157 6 chr5 49821471 49821789 -153263743 - MLT1E LTR MaLR 0 593 228 1636 185 101 65 chr5 49822391 49822855 -153262677 + LTR42 LTR ERVL 15 495 0 260 331 72 22 chr5 49824298 49824437 -153261095 + MIR3 SINE MIR 37 182 -26 392 358 86 8 chr5 49824660 49824903 -153260629 - L3 LINE CR1 -2 1575 1314 9648 38 19 1 chr5 49824905 49826873 -153258659 - L1PA4 LINE L1 -3 6152 4166 257 283 98 33 chr5 49827234 49827326 -153258206 - MIR SINE MIR -8 254 157 401 313 56 28 chr5 49828360 49828504 -153257028 - MIR3 SINE MIR -44 164 17 1912 230 44 29 chr5 49829607 49830060 -153255472 - MLT1G LTR MaLR -116 474 15 508 340 118 22 chr5 49831833 49832248 -153253284 + L2 LINE L2 2245 2699 -615 189 0 0 0 chr5 49832427 49832448 -153253084 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 301 254 73 27 chr5 49832579 49832689 -153252843 + L2 LINE L2 3199 3313 0 406 321 36 36 chr5 49833224 49833389 -153252143 - L2 LINE L2 -1 3312 3148 2285 100 3 0 chr5 49834091 49834390 -153251142 + AluSx SINE Alu 3 302 -10 254 332 63 37 chr5 49835828 49836018 -153249514 - L3 LINE CR1 -891 686 492 219 316 38 75 chr5 49836172 49836305 -153249227 - MIR SINE MIR -109 153 26 24 53 0 0 chr5 49836334 49836372 -153249160 + AT_rich Low_complexity Low_complexity 1 38 0 310 279 23 0 chr5 49837287 49837373 -153248159 + MIR SINE MIR 126 213 -49 218 275 14 0 chr5 49837417 49837486 -153248046 - MIR SINE MIR -16 246 177 1908 136 72 31 chr5 49837787 49838147 -153247385 + THE1C LTR MaLR 1 375 0 9674 136 9 40 chr5 49838149 49839778 -153245754 + THE1C-int LTR MaLR 3 1580 0 1535 155 123 26 chr5 49839779 49840121 -153245411 + THE1C LTR MaLR 1 375 0 209 277 0 31 chr5 49840883 49840948 -153244584 + L2 LINE L2 3251 3313 0 219 114 0 0 chr5 49841003 49841038 -153244494 + (TG)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 49841288 49841316 -153244216 + AT_rich Low_complexity Low_complexity 1 28 0 293 297 22 0 chr5 49841684 49841775 -153243757 + MIR SINE MIR 109 201 -61 190 245 0 41 chr5 49842023 49842072 -153243460 + L2 LINE L2 3006 3052 -261 304 151 8 67 chr5 49842664 49842783 -153242749 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 227 260 118 41 chr5 49843176 49843345 -153242187 - L1ME LINE L1 -215 5906 5725 222 91 0 0 chr5 49843665 49843698 -153241834 + (TG)n Simple_repeat Simple_repeat 2 34 0 1954 131 0 3 chr5 49844019 49844349 -153241183 + AluSx SINE Alu 1 329 0 2253 110 10 0 chr5 49844952 49845260 -153240272 + AluSx SINE Alu 1 311 -1 240 316 67 67 chr5 49845722 49845931 -153239601 + L2 LINE L2 2138 2346 -968 261 253 91 40 chr5 49846421 49846520 -153239012 - L2 LINE L2 0 3313 3210 221 287 85 0 chr5 49846622 49846716 -153238816 - L2 LINE L2 -340 2932 2831 1452 152 125 27 chr5 49846840 49847137 -153238395 - MER1B DNA MER1_type -1 338 13 22 0 0 0 chr5 49848571 49848593 -153236939 + AT_rich Low_complexity Low_complexity 1 22 0 1997 113 43 0 chr5 49849130 49849412 -153236120 + AluSx SINE Alu 2 295 -17 321 300 67 20 chr5 49851051 49851201 -153234331 - L1ME4a LINE L1 -5 6116 5960 22 0 0 0 chr5 49851396 49851418 -153234114 + AT_rich Low_complexity Low_complexity 1 22 0 287 314 0 0 chr5 49852240 49852326 -153233206 + CT-rich Low_complexity Low_complexity 5 90 0 2448 130 8 3 chr5 49852468 49852830 -153232702 - THE1B LTR MaLR 0 364 1 565 306 121 34 chr5 49854366 49854889 -153230643 - L1MEd LINE L1 -3379 2750 2183 270 263 77 32 chr5 49854946 49855102 -153230430 - L1MEd LINE L1 -4969 1150 988 1223 245 17 3 chr5 49855366 49855668 -153229864 - AluJo SINE Alu -6 306 1 710 62 21 0 chr5 49855701 49855821 -153229711 - AluSc SINE Alu 0 304 183 847 239 5 0 chr5 49856431 49856636 -153228896 - MER3 DNA MER1_type -2 207 2 246 59 0 0 chr5 49856743 49856777 -153228755 - L1P LINE L1 -2809 3337 3304 7376 40 1 0 chr5 49856778 49857698 -153227834 + L1PA4 LINE L1 5234 6154 -1 317 350 8 0 chr5 49857842 49857959 -153227573 + MIR SINE MIR 32 149 -113 2124 115 3 3 chr5 49858058 49858353 -153227179 - AluSp SINE Alu -18 295 1 201 374 13 39 chr5 49859451 49859606 -153225926 + L2 LINE L2 2491 2641 -673 194 323 43 43 chr5 49859611 49859704 -153225828 - L2 LINE L2 -38 3275 3183 281 340 27 53 chr5 49859774 49859962 -153225570 + MER5A DNA MER1_type 7 189 0 2107 122 3 0 chr5 49960384 49960704 -153124828 - Harlequin LTR ERV1 -6575 321 1 3426 101 0 14 chr5 49960704 49961199 -153124333 - LTR2B LTR ERV1 0 490 3 1188 35 7 0 chr5 49961201 49961344 -153124188 + LTR2B LTR ERV1 345 488 -2 292 231 31 0 chr5 49961346 49961411 -153124121 - L1MEc LINE L1 -4389 2007 1941 1475 228 6 21 chr5 49961786 49962119 -153123413 + MLT1E2 LTR MaLR 299 626 0 541 86 95 6 chr5 49962290 49962627 -153122905 + (TA)n Simple_repeat Simple_repeat 1 366 0 1880 155 22 6 chr5 49962668 49963030 -153122502 + L1 LINE L1 3388 3755 -2391 273 172 0 0 chr5 49963039 49963103 -153122429 + (TA)n Simple_repeat Simple_repeat 2 65 0 210 37 0 0 chr5 49963157 49963184 -153122348 + (GA)n Simple_repeat Simple_repeat 2 28 0 534 170 13 0 chr5 49963224 49963329 -153122203 + L1P5 LINE L1 5566 5673 -483 293 50 136 0 chr5 49963329 49963469 -153122063 + (TA)n Simple_repeat Simple_repeat 2 160 0 * 490 94 28 66 chr5 49963445 49963626 -153121906 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 398 234 22 22 chr5 49963627 49963984 -153121548 + (TTATA)n Simple_repeat Simple_repeat 1 357 0 296 195 0 27 chr5 49963984 49964133 -153121399 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 454 175 78 0 chr5 49964135 49964289 -153121243 + (TTATA)n Simple_repeat Simple_repeat 5 170 0 496 102 51 34 chr5 49964295 49964471 -153121061 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 306 93 112 0 chr5 49964457 49964618 -153120914 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 225 0 0 0 chr5 49964619 49964644 -153120888 + (GA)n Simple_repeat Simple_repeat 2 26 0 529 252 52 0 chr5 49964668 49964803 -153120729 + MLT1A1 LTR MaLR 178 319 -46 306 203 16 16 chr5 49965133 49965197 -153120335 - MER5B DNA MER1_type -114 64 1 180 286 22 33 chr5 49965207 49965298 -153120234 + L3 LINE CR1 1134 1223 -354 417 95 83 24 chr5 49965458 49965627 -153119905 + (TA)n Simple_repeat Simple_repeat 2 180 0 204 186 60 60 chr5 49965629 49965796 -153119736 + (TATG)n Simple_repeat Simple_repeat 3 169 0 363 133 75 40 chr5 49965937 49966110 -153119422 + (TA)n Simple_repeat Simple_repeat 1 179 0 430 82 74 21 chr5 49966137 49966530 -153119002 + (TA)n Simple_repeat Simple_repeat 1 413 0 46 0 0 0 chr5 49966530 49966576 -153118956 + AT_rich Low_complexity Low_complexity 1 46 0 356 253 11 39 chr5 49966580 49966762 -153118770 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 282 214 21 0 chr5 49966765 49966905 -153118627 + (TA)n Simple_repeat Simple_repeat 2 144 0 23 0 0 0 chr5 49966910 49966933 -153118599 + AT_rich Low_complexity Low_complexity 1 23 0 231 200 6 29 chr5 49966937 49967112 -153118420 + (TATATG)n Simple_repeat Simple_repeat 2 172 0 34 24 0 0 chr5 49967112 49967153 -153118379 + AT_rich Low_complexity Low_complexity 1 41 0 506 71 77 18 chr5 49967155 49967324 -153118208 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 549 91 50 34 chr5 49967310 49967657 -153117875 + (TTATA)n Simple_repeat Simple_repeat 1 352 0 232 241 54 9 chr5 49967663 49967775 -153117757 + (TA)n Simple_repeat Simple_repeat 1 117 0 2093 120 0 0 chr5 49967775 49968066 -153117466 - AluSg SINE Alu -19 291 1 602 198 30 30 chr5 49968071 49968238 -153117294 - L1P LINE L1 -2812 3334 3168 419 272 55 55 chr5 49968925 49969127 -153116405 - MIR3 SINE MIR -5 203 2 5602 40 1 0 chr5 49969503 49970184 -153115348 - L1PA5 LINE L1 -13 6141 5460 537 158 0 0 chr5 49970697 49970792 -153114740 + L1MB4 LINE L1 5995 6089 -91 1622 195 30 43 chr5 49970908 49971278 -153114254 - MLT1A1 LTR MaLR 0 365 1 234 149 0 0 chr5 49971446 49971493 -153114039 + L1MB3 LINE L1 6128 6174 -9 874 301 94 46 chr5 49972408 49973290 -153112242 + L2 LINE L2 2379 3313 0 221 329 99 31 chr5 49973416 49973577 -153111955 + L2 LINE L2 3142 3313 0 181 262 0 66 chr5 49973813 49973874 -153111658 + MIR3 SINE MIR 112 168 -40 299 354 23 8 chr5 49973937 49974067 -153111465 - MIR SINE MIR -124 138 7 1859 106 6 90 chr5 49974281 49974602 -153110930 + AluSx SINE Alu 1 294 -18 224 284 62 12 chr5 49975700 49975781 -153109751 + MIR SINE MIR 63 147 -115 23 0 0 0 chr5 49976080 49976103 -153109429 + AT_rich Low_complexity Low_complexity 1 23 0 1597 184 3 10 chr5 49977047 49977346 -153108186 - AluJo SINE Alu -15 297 1 3742 83 25 9 chr5 49977762 49978289 -153107243 + MER57-int LTR ERV1 320 854 -6042 1050 43 0 7 chr5 49978288 49978428 -153107104 + MER57-int LTR ERV1 1572 1710 -5186 * 2758 72 2 2 chr5 49978416 49978816 -153106716 + MER57-int LTR ERV1 2175 2574 -4322 * 3591 65 13 0 chr5 49978815 49979273 -153106259 + MER57-int LTR ERV1 3352 3815 -3081 640 298 143 8 chr5 49979286 49979538 -153105994 + MER57-int LTR ERV1 3 288 -7249 1101 180 117 47 chr5 49979913 49980350 -153105182 + MER57-int LTR ERV1 1069 1450 -336 1261 236 41 36 chr5 49980389 49980829 -153104703 + MER57-int LTR ERV1 1527 1968 -2968 3054 225 59 93 chr5 49980962 49982779 -153102753 + MER57-int LTR ERV1 2202 5821 -1498 995 250 44 114 chr5 49983102 49983514 -153102018 + MER57-int LTR ERV1 5825 6207 -1330 1567 310 86 39 chr5 49983975 49984847 -153100685 + MER57-int LTR ERV1 6232 7144 -393 822 214 217 114 chr5 49984847 49985207 -153100325 + MER57B LTR ERV1 1 397 -6 6869 223 43 60 chr5 49985226 49985756 -153099776 + L1MC1 LINE L1 2315 2853 -3760 189 0 0 0 chr5 49985756 49985777 -153099755 + (CAT)n Simple_repeat Simple_repeat 3 23 0 6869 223 43 60 chr5 49985777 49987570 -153097962 + L1MC1 LINE L1 2853 4675 -1938 1965 118 6 44 chr5 49987570 49987885 -153097647 + AluSc SINE Alu 1 303 -6 6869 223 43 60 chr5 49987885 49988138 -153097394 + L1MC1 LINE L1 4675 4931 -1682 297 68 0 0 chr5 49988138 49988182 -153097350 + (TA)n Simple_repeat Simple_repeat 1 44 0 6869 223 43 60 chr5 49988182 49989902 -153095630 + L1MC1 LINE L1 4931 6340 -273 1476 344 47 45 chr5 49989902 49990329 -153095203 - MSTA LTR MaLR 0 428 1 6869 223 43 60 chr5 49990329 49990599 -153094933 + L1MC1 LINE L1 6340 6613 0 269 275 38 12 chr5 49991131 49991211 -153094321 + MIR SINE MIR 75 156 -106 468 35 0 0 chr5 49991681 49991739 -153093793 + (TA)n Simple_repeat Simple_repeat 2 59 0 946 111 10 76 chr5 49991750 49991948 -153093584 - MER50 LTR ERV1 -64 670 486 196 263 53 53 chr5 49992792 49992849 -153092683 + MER5A DNA MER1_type 47 103 -86 259 280 175 35 chr5 49993373 49993516 -153092016 - L3 LINE CR1 -254 1323 1161 250 280 127 0 chr5 49993511 49993629 -153091903 - L2 LINE L2 -1 3312 3180 * 348 298 61 0 chr5 49993687 49993801 -153091731 - L3 LINE CR1 -550 1027 907 1761 128 0 15 chr5 49995367 49995632 -153089900 - AluSx SINE Alu -37 275 15 251 275 44 11 chr5 49995971 49996062 -153089470 - MLT1K LTR MaLR -7 581 488 2632 160 164 39 chr5 49996256 49997410 -153088122 + LTR12 LTR ERV1 18 714 0 796 280 100 38 chr5 49997538 49997877 -153087655 - MLT1H LTR MaLR 0 549 190 893 214 15 0 chr5 49997993 49998199 -153087333 - L1P LINE L1 -2990 3156 2948 22 0 0 0 chr5 49998730 49998752 -153086780 + AT_rich Low_complexity Low_complexity 1 22 0 588 342 102 7 chr5 49999764 50000059 -153085473 - L2 LINE L2 -427 2887 2565 926 273 101 21 chr5 50000060 50000437 -153085095 + L1ME1 LINE L1 5756 6162 -4 834 307 77 22 chr5 50000454 50000816 -153084716 - L2 LINE L2 -789 2525 2144 294 29 0 0 chr5 50003087 50003122 -153082410 + (CA)n Simple_repeat Simple_repeat 2 36 0 2827 184 14 12 chr5 50003514 50004096 -153081436 + L1PB4 LINE L1 5572 6154 -2 355 310 148 19 chr5 50004396 50004551 -153080981 + MER5A DNA MER1_type 8 182 -7 378 352 104 14 chr5 50004859 50005223 -153080309 - L2 LINE L2 -931 2383 1987 494 353 36 30 chr5 50005238 50005353 -153080179 - LTR16C LTR ERVL 0 491 378 2726 85 3 0 chr5 50005353 50005707 -153079825 - THE1A LTR MaLR 0 355 1 494 353 36 30 chr5 50005707 50005894 -153079638 - LTR16C LTR ERVL -113 378 187 460 97 39 10 chr5 50006117 50006220 -153079312 + (TA)n Simple_repeat Simple_repeat 2 107 0 311 337 80 11 chr5 50006282 50006469 -153079063 - L2 LINE L2 -1427 1887 1688 * 1007 243 22 2 chr5 50006466 50006696 -153078836 + MIR SINE MIR 6 235 -27 223 347 78 52 chr5 50006756 50007024 -153078508 - L2 LINE L2 -1758 1556 1282 345 24 0 0 chr5 50007101 50007143 -153078389 + (CA)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr5 50007480 50007511 -153078021 + AT_rich Low_complexity Low_complexity 1 31 0 1338 124 36 0 chr5 50007702 50007896 -153077636 + AluSx SINE Alu 28 228 -84 314 146 0 0 chr5 50007896 50007944 -153077588 + AluSq/x SINE Alu 85 132 -170 1507 156 49 35 chr5 50007946 50008259 -153077273 + AluSq SINE Alu 1 317 0 28 29 0 0 chr5 50008975 50009010 -153076522 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr5 50009170 50009217 -153076315 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr5 50009318 50009345 -153076187 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr5 50009852 50009882 -153075650 + AT_rich Low_complexity Low_complexity 1 30 0 1970 150 110 69 chr5 50010130 50010649 -153074883 - LTR49 LTR ERV1 -55 540 1 281 310 69 46 chr5 50010649 50010910 -153074622 - L2 LINE L2 -586 2728 2462 2108 151 42 31 chr5 50011117 50011542 -153073990 - MSTB1 LTR MaLR -2 430 1 459 287 139 5 chr5 50011986 50012188 -153073344 + HAL1 LINE L1 1575 1803 -704 291 188 38 38 chr5 50012354 50012434 -153073098 + HAL1 LINE L1 2073 2152 -355 36 77 0 0 chr5 50012896 50012974 -153072558 + AT_rich Low_complexity Low_complexity 1 78 0 249 241 0 103 chr5 50013678 50013765 -153071767 + L2 LINE L2 2309 2386 -928 205 200 40 0 chr5 50013782 50013832 -153071700 + L2 LINE L2 3219 3270 -2 * 719 233 41 0 chr5 50013825 50013971 -153071561 - MER5A DNA MER1_type -37 152 1 205 394 24 0 chr5 50014084 50014211 -153071321 - MIR3 SINE MIR -1 207 78 183 306 20 0 chr5 50014763 50014812 -153070720 + MIR SINE MIR 28 77 -131 312 271 164 71 chr5 50015029 50015169 -153070363 - MER5A DNA MER1_type -3 186 34 43429 44 1 2 chr5 50016752 50022905 -153062627 - L1PA3 LINE L1 -3 6152 9 2180 145 3 3 chr5 50023055 50023393 -153062139 + THE1C LTR MaLR 33 370 -5 10152 119 27 7 chr5 50023398 50024946 -153060586 + THE1C-int LTR MaLR 1 1580 0 2488 122 3 11 chr5 50024946 50025324 -153060208 + THE1C LTR MaLR 1 375 0 35 0 0 0 chr5 50025406 50025441 -153060091 + AT_rich Low_complexity Low_complexity 1 35 0 313 400 75 17 chr5 50025722 50026202 -153059330 + L2 LINE L2 2446 2953 -361 1757 144 16 42 chr5 50026745 50027057 -153058475 + AluSx SINE Alu 1 304 -8 3919 168 35 102 chr5 50027062 50027523 -153058009 - HSMAR2 DNA Mariner -1 1301 811 808 201 14 0 chr5 50027523 50027667 -153057865 - AluJb SINE Alu -21 291 146 3919 168 35 102 chr5 50027667 50028177 -153057355 - HSMAR2 DNA Mariner -491 811 262 375 222 0 0 chr5 50028306 50028378 -153057154 + HSMAR2 DNA Mariner 261 332 -970 * 1381 163 21 0 chr5 50028372 50028612 -153056920 - HSMAR2 DNA Mariner -1053 249 5 2086 127 0 7 chr5 50029066 50029365 -153056167 + AluSq SINE Alu 1 297 -16 280 344 31 31 chr5 50029568 50029792 -153055740 + L2 LINE L2 2611 2834 -480 266 331 161 0 chr5 50030000 50030130 -153055402 + L2 LINE L2 3158 3308 -5 358 242 11 33 chr5 50030645 50030736 -153054796 + L2 LINE L2 3224 3312 -1 339 325 89 41 chr5 50031426 50031697 -153053835 + L2 LINE L2 2984 3267 -46 1929 162 11 58 chr5 50032270 50032652 -153052880 + MLT1A1 LTR MaLR 1 364 -1 722 259 42 5 chr5 50033387 50033576 -153051956 + MIR SINE MIR 53 248 -14 187 294 0 0 chr5 50034608 50034659 -153050873 - MIR SINE MIR -3 259 209 987 151 6 0 chr5 50035343 50035502 -153050030 + L1M1 LINE L1 5430 5589 -716 5685 132 5 3 chr5 50035502 50036708 -153048824 + L1MA2 LINE L1 4855 6064 -240 2425 95 26 31 chr5 50036708 50037098 -153048434 + L1MA2 LINE L1 5911 6298 -6 246 219 0 0 chr5 50037431 50037495 -153048037 + (ATG)n Simple_repeat Simple_repeat 2 65 0 22 35 0 0 chr5 50038464 50038493 -153047039 + AT_rich Low_complexity Low_complexity 1 29 0 227 100 0 25 chr5 50038824 50038864 -153046668 + (TA)n Simple_repeat Simple_repeat 2 40 0 848 236 51 4 chr5 50039044 50039298 -153046234 + L1MD3 LINE L1 7730 7995 0 195 308 110 22 chr5 50039345 50039436 -153046096 + MIR SINE MIR 106 204 -58 993 179 85 12 chr5 50039925 50040171 -153045361 + L1MB4 LINE L1 5902 6165 -15 2786 156 91 98 chr5 50040491 50041228 -153044304 + MER44D DNA MER2_type 2 605 0 1854 138 62 49 chr5 50041303 50041688 -153043844 - MLT1B LTR MaLR 0 390 1 23 33 0 0 chr5 50042271 50042301 -153043231 + AT_rich Low_complexity Low_complexity 1 30 0 516 89 0 0 chr5 50043052 50043131 -153042401 - L1MA1 LINE L1 -4 6298 6220 25 31 0 0 chr5 50043322 50043354 -153042178 + AT_rich Low_complexity Low_complexity 1 32 0 22 94 0 0 chr5 50044393 50044457 -153041075 + AT_rich Low_complexity Low_complexity 1 64 0 2503 25 16 0 chr5 50044713 50045132 -153040400 - L1PA4 LINE L1 -591 5564 5141 4756 42 8 0 chr5 50045132 50045721 -153039811 + L1PA4 LINE L1 5560 6154 -1 1174 197 67 10 chr5 50045870 50046169 -153039363 - Charlie5 DNA MER1_type 0 2619 2304 432 289 9 0 chr5 50046277 50046391 -153039141 - MER3 DNA MER1_type -41 168 54 361 257 50 29 chr5 50046438 50046527 -153039005 + MIR SINE MIR 71 166 -96 1897 166 37 3 chr5 50046527 50046876 -153038656 + MER46B DNA MER2_type 1 236 0 361 257 50 29 chr5 50046876 50046926 -153038606 + MIR SINE MIR 166 213 -49 255 254 69 90 chr5 50047889 50048078 -153037454 + MIR SINE MIR 65 249 -13 543 259 15 0 chr5 50048773 50048904 -153036628 + MIR SINE MIR 130 262 0 362 250 19 9 chr5 50049655 50049763 -153035769 + L1ME3 LINE L1 5175 5283 -863 1485 254 77 79 chr5 50049766 50050585 -153034947 + L1ME3 LINE L1 5316 6132 -30 205 191 0 0 chr5 50050696 50050738 -153034794 + T-rich Low_complexity Low_complexity 1 42 0 41036 63 3 9 chr5 50050746 50056937 -153028595 - L1PA5 LINE L1 -1 6153 1 22 35 0 0 chr5 50057044 50057073 -153028459 + AT_rich Low_complexity Low_complexity 1 29 0 6193 100 25 5 chr5 50058134 50059284 -153026248 - L1PA12 LINE L1 -1 6167 5003 7900 149 10 3 chr5 50059284 50060624 -153024908 + L1P LINE L1 3484 4832 -1314 3939 197 24 35 chr5 50060933 50060970 -153024562 - L1MC3 LINE L1 -8 7777 7741 1945 186 59 5 chr5 50060970 50061378 -153024154 - MSTB1 LTR MaLR -2 430 1 3939 197 24 35 chr5 50061378 50062272 -153023260 - L1MC3 LINE L1 -44 7741 6857 915 159 0 0 chr5 50063427 50063659 -153021873 + CT-rich Low_complexity Low_complexity 1 232 0 2168 114 0 7 chr5 50064622 50064919 -153020613 - AluSg1 SINE Alu -11 298 4 226 357 14 0 chr5 50065221 50065291 -153020241 - L2 LINE L2 -1 3271 3201 389 311 23 0 chr5 50066149 50066281 -153019251 - MLT1J LTR MaLR -308 203 69 2617 91 9 0 chr5 50066303 50066653 -153018879 - THE1A LTR MaLR 0 355 3 39 0 0 0 chr5 50066661 50066700 -153018832 + AT_rich Low_complexity Low_complexity 1 39 0 235 245 21 53 chr5 50066719 50066813 -153018719 - L1ME LINE L1 -474 5647 5557 1381 159 132 29 chr5 50066851 50067191 -153018341 - THE1C LTR MaLR 0 375 1 1619 173 10 22 chr5 50067568 50067881 -153017651 - AluJb SINE Alu -3 309 1 226 213 0 38 chr5 50067896 50067976 -153017556 + T-rich Low_complexity Low_complexity 5 81 0 2049 160 18 41 chr5 50068584 50068978 -153016554 - Tigger2 DNA MER2_type 0 2718 2334 256 234 0 0 chr5 50068973 50069020 -153016512 - Tigger2 DNA MER2_type -2655 63 17 * 225 293 14 85 chr5 50069407 50069619 -153015913 - L1 LINE L1 -2419 3727 3531 339 316 0 38 chr5 50069705 50069863 -153015669 + MER5B DNA MER1_type 1 152 -26 21 0 0 0 chr5 50069863 50069884 -153015648 + AT_rich Low_complexity Low_complexity 1 21 0 3009 178 136 92 chr5 50069962 50070512 -153015020 - L1MC3 LINE L1 -14 7771 7247 256 232 24 37 chr5 50070512 50070594 -153014938 - MLT1F1 LTR MaLR -442 125 45 3009 178 136 92 chr5 50070594 50070968 -153014564 - L1MC3 LINE L1 -538 7247 6721 1478 184 11 28 chr5 50070968 50071250 -153014282 - MSTC LTR MaLR -151 277 1 2619 278 65 30 chr5 50071250 50071857 -153013675 - L1M4 LINE L1 -2054 4092 3507 3519 117 2 4 chr5 50071857 50072369 -153013163 + MER9 LTR ERVK 1 511 0 2619 278 65 30 chr5 50072369 50073140 -153012392 - L1M4 LINE L1 -2639 3507 2667 299 297 0 11 chr5 50073899 50073990 -153011542 - L2 LINE L2 -36 3277 3188 251 283 101 7 chr5 50074102 50074240 -153011292 - L2 LINE L2 -3144 170 20 382 331 6 45 chr5 50074297 50074454 -153011078 - MIR SINE MIR -92 170 20 23 33 0 0 chr5 50074723 50074753 -153010779 + AT_rich Low_complexity Low_complexity 1 30 0 330 26 0 0 chr5 50075799 50075838 -153009694 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 588 202 0 0 chr5 50075866 50075965 -153009567 - AluJb SINE Alu -81 231 133 2006 127 0 0 chr5 50075965 50076264 -153009268 + L1P4 LINE L1 5400 5698 -465 22 80 0 0 chr5 50076331 50076381 -153009151 + AT_rich Low_complexity Low_complexity 1 50 0 761 227 0 48 chr5 50076864 50077071 -153008461 + MER3 DNA MER1_type 7 203 -6 531 346 166 19 chr5 50077241 50077490 -153008042 - L2 LINE L2 -5 3308 3097 1393 214 54 3 chr5 50077490 50077785 -153007747 + AluJb SINE Alu 3 312 0 531 346 166 19 chr5 50077785 50077968 -153007564 - L2 LINE L2 -216 3097 2812 397 312 138 5 chr5 50078043 50078232 -153007300 - L2 LINE L2 -2324 990 777 832 128 15 8 chr5 50078875 50079007 -153006525 + MLT1A1 LTR MaLR 7 139 -226 884 130 0 14 chr5 50079007 50079145 -153006387 - THE1B LTR MaLR 0 364 229 1579 124 30 0 chr5 50079249 50079483 -153006049 - THE1B LTR MaLR -123 241 1 712 241 62 31 chr5 50079483 50079707 -153005825 + MLT1A1 LTR MaLR 135 365 0 230 318 0 0 chr5 50080916 50080982 -153004550 + MIR3 SINE MIR 116 181 -27 499 278 13 13 chr5 50081357 50081508 -153004024 + MIR SINE MIR 80 230 -32 204 191 43 21 chr5 50081901 50081948 -153003584 - MIR SINE MIR -21 241 194 314 78 0 20 chr5 50082310 50082361 -153003171 + (CA)n Simple_repeat Simple_repeat 2 51 0 6036 110 8 0 chr5 50085135 50086237 -152999295 - L1PA14 LINE L1 -2 6159 5047 183 304 58 29 chr5 50086699 50086768 -152998764 + L2 LINE L2 3201 3271 -1 200 278 0 0 chr5 50086816 50086870 -152998662 - L2 LINE L2 -494 2820 2767 2123 92 10 23 chr5 50087546 50087851 -152997681 + AluSc SINE Alu 1 301 -8 2045 146 122 10 chr5 50088015 50088400 -152997132 - MSTA LTR MaLR 0 428 1 759 176 0 15 chr5 50088959 50089095 -152996437 + MER20 DNA MER1_type 85 218 -1 573 258 72 30 chr5 50089754 50090018 -152995514 + L1MC5 LINE L1 7611 7885 -76 505 243 79 28 chr5 50090616 50090793 -152994739 - MER58C DNA MER1_type -1 214 29 290 257 239 0 chr5 50093204 50093313 -152992219 + MER5A DNA MER1_type 55 189 0 1780 136 4 4 chr5 50094371 50094636 -152990896 - AluSx SINE Alu -9 303 39 195 341 56 50 chr5 50094860 50095039 -152990493 + L3 LINE CR1 1164 1343 -234 213 215 152 63 chr5 50097921 50098000 -152987532 - L2 LINE L2 0 3272 3187 408 20 0 0 chr5 50098229 50098278 -152987254 + (TG)n Simple_repeat Simple_repeat 2 50 0 29 47 0 0 chr5 50098838 50098881 -152986651 + AT_rich Low_complexity Low_complexity 1 43 0 293 306 56 66 chr5 50099320 50099516 -152986016 + MLT1L LTR MaLR 201 394 -221 231 180 16 16 chr5 50100241 50100302 -152985230 + A-rich Low_complexity Low_complexity 3 63 0 1104 214 51 20 chr5 50100319 50100613 -152984919 - L1MB8 LINE L1 -7 6171 5869 203 241 0 0 chr5 50100832 50100886 -152984646 + (CA)n Simple_repeat Simple_repeat 2 55 0 195 344 62 0 chr5 50100956 50101020 -152984512 + L2 LINE L2 3018 3085 -187 2485 71 0 7 chr5 50102463 50102773 -152982759 - AluSc SINE Alu -1 308 1 2155 130 0 0 chr5 50103256 50103556 -152981976 + AluSx SINE Alu 5 304 -8 21 0 0 0 chr5 50104039 50104060 -152981472 + AT_rich Low_complexity Low_complexity 1 21 0 205 270 54 54 chr5 50104210 50104321 -152981211 + L2 LINE L2 2950 3060 -212 2201 112 0 3 chr5 50105056 50105352 -152980180 - AluSg SINE Alu -15 295 1 328 326 22 92 chr5 50106132 50106168 -152979364 - MER5B DNA MER1_type -7 171 134 2270 78 0 17 chr5 50106168 50106504 -152979028 + AluY SINE Alu 1 311 0 328 326 22 92 chr5 50106504 50106651 -152978881 - MER5B DNA MER1_type -44 134 1 267 281 230 15 chr5 50106685 50106820 -152978712 - MER5A DNA MER1_type 0 189 26 277 342 51 61 chr5 50106868 50107064 -152978468 + MIR SINE MIR 59 252 -10 227 242 0 0 chr5 50107856 50107918 -152977614 + (CAG)n Simple_repeat Simple_repeat 3 64 0 21 57 0 0 chr5 50108482 50108517 -152977015 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 50109513 50109555 -152975977 + AT_rich Low_complexity Low_complexity 1 42 0 26 0 0 0 chr5 50110505 50110531 -152975001 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr5 50110960 50110994 -152974538 + AT_rich Low_complexity Low_complexity 1 34 0 757 176 0 0 chr5 50113386 50113517 -152972015 + FLAM_C SINE Alu 1 131 -12 944 179 0 19 chr5 50113576 50113738 -152971794 + AluJb SINE Alu 146 304 -8 2102 122 0 7 chr5 50113869 50114172 -152971360 - AluSx SINE Alu -11 301 1 328 269 0 43 chr5 50114728 50114821 -152970711 + MER5A DNA MER1_type 12 100 -89 1797 132 66 120 chr5 50115452 50116024 -152969508 - LTR12 LTR ERV1 -219 2219 53 270 211 0 0 chr5 50116024 50116076 -152969456 - LTR30 LTR ERV1 -670 52 1 375 302 0 17 chr5 50116091 50116207 -152969325 + MIR SINE MIR 129 242 -20 213 132 0 0 chr5 50116823 50116861 -152968671 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 56 0 0 chr5 50118220 50118256 -152967276 + AT_rich Low_complexity Low_complexity 1 36 0 190 348 29 0 chr5 50118281 50118350 -152967182 + MIR3 SINE MIR 123 193 -15 196 286 143 0 chr5 50118411 50118488 -152967044 + L2 LINE L2 3175 3262 -10 232 49 73 0 chr5 50119407 50119448 -152966084 + T-rich Low_complexity Low_complexity 3 46 0 2224 76 11 0 chr5 50119713 50120038 -152965494 - AluY SINE Alu 0 328 1 339 179 0 0 chr5 50120079 50120135 -152965397 + L2 LINE L2 3217 3272 0 2232 123 6 14 chr5 50120230 50120595 -152964937 + L1MA2 LINE L1 5943 6304 0 1394 195 21 7 chr5 50120975 50121257 -152964275 - AluSx SINE Alu -16 286 1 325 258 8 8 chr5 50121656 50121788 -152963744 + (TA)n Simple_repeat Simple_repeat 2 133 0 219 367 70 55 chr5 50122036 50122235 -152963297 - L2 LINE L2 -342 2972 2771 5785 262 39 31 chr5 50122239 50124714 -152960818 + L1PA15 LINE L1 1 2854 -3943 1976 137 7 0 chr5 50124714 50124991 -152960541 + AluSg SINE Alu 1 279 -31 5785 262 39 31 chr5 50124991 50126255 -152959277 + L1PA15 LINE L1 2854 4106 -2691 42792 50 3 3 chr5 50126257 50132454 -152953078 + L1PA4 LINE L1 1 6199 0 8176 196 17 18 chr5 50132455 50132941 -152952591 + L1PA15 LINE L1 4097 4582 -2234 2205 99 3 0 chr5 50132941 50133234 -152952298 + AluSg SINE Alu 1 294 -16 8176 196 17 18 chr5 50133234 50133864 -152951668 + L1PA15 LINE L1 4582 5211 -1605 2068 123 7 0 chr5 50133864 50134157 -152951375 + AluSp SINE Alu 1 295 -18 8176 196 17 18 chr5 50134157 50135763 -152949769 + L1PA15 LINE L1 5211 6813 -3 2663 88 3 0 chr5 50135883 50136237 -152949295 + THE1A LTR MaLR 1 355 0 10879 105 15 14 chr5 50136238 50137815 -152947717 + THE1A-int LTR MaLR 2 1580 0 2468 100 12 0 chr5 50137815 50138155 -152947377 + THE1A LTR MaLR 1 344 -11 453 262 0 0 chr5 50138162 50138269 -152947263 + MER94 DNA DNA 8 114 -20 772 248 8 65 chr5 50139487 50139733 -152945799 + MIR SINE MIR 2 233 -29 375 322 90 6 chr5 50139760 50139937 -152945595 + L2 LINE L2 2219 2410 -904 1886 191 19 8 chr5 50139957 50140318 -152945214 - MLT1A1 LTR MaLR 0 365 1 6181 89 5 29 chr5 50341982 50343050 -152742482 + L1P LINE L1 2536 3500 -2646 11889 30 0 1 chr5 50343157 50344583 -152740949 - L1P LINE L1 -1219 4927 3503 8220 50 4 1 chr5 50344755 50345808 -152739724 + L1P LINE L1 1290 2345 -3801 1449 208 13 20 chr5 50345808 50346106 -152739426 - AluJb SINE Alu -16 296 1 191 346 5 90 chr5 50346106 50346294 -152739238 - L3 LINE CR1 -915 662 491 341 372 61 22 chr5 50346583 50346763 -152738769 - L2 LINE L2 -302 3011 2825 2013 109 10 20 chr5 50346882 50347184 -152738348 + AluSg SINE Alu 1 299 -11 421 333 118 58 chr5 50347191 50347834 -152737698 - L2 LINE L2 -353 2961 2280 202 188 0 62 chr5 50349820 50349868 -152735664 + L2 LINE L2 3213 3257 -15 225 0 0 0 chr5 50350719 50350744 -152734788 + (A)n Simple_repeat Simple_repeat 1 25 0 367 303 45 19 chr5 50352761 50352916 -152732616 + LTR33 LTR ERVL 358 516 -5 314 358 89 11 chr5 50352955 50353134 -152732398 + MIR3 SINE MIR 16 208 0 201 39 0 0 chr5 50353662 50353688 -152731844 + (CA)n Simple_repeat Simple_repeat 2 27 0 227 283 87 22 chr5 50353870 50353962 -152731570 + L1ME3A LINE L1 5612 5709 -461 2307 81 10 0 chr5 50353967 50354315 -152731217 - AluY SINE Alu 0 351 1 295 295 9 0 chr5 50354352 50354457 -152731075 + L1ME3A LINE L1 5781 5886 -284 25 31 0 0 chr5 50354570 50354602 -152730930 + AT_rich Low_complexity Low_complexity 1 32 0 305 273 51 10 chr5 50354641 50354783 -152730749 - MLT1A2 LTR MaLR 0 375 241 1766 209 24 33 chr5 50354934 50355384 -152730148 + MER39 LTR ERV1 260 705 -2 673 209 8 0 chr5 50355393 50355522 -152730010 - MLT1A2 LTR MaLR -241 133 4 1943 152 18 39 chr5 50355754 50356142 -152729390 + L1MA3 LINE L1 5926 6305 0 2116 89 0 57 chr5 50356938 50357280 -152728252 + AluY SINE Alu 1 311 0 2429 114 19 11 chr5 50358877 50359238 -152726294 + THE1B LTR MaLR 1 364 0 31 58 0 0 chr5 50359495 50359547 -152725985 + AT_rich Low_complexity Low_complexity 1 52 0 306 332 98 54 chr5 50360491 50360696 -152724836 + MIR SINE MIR 5 218 -44 1821 146 32 0 chr5 50361978 50362259 -152723273 + AluSx SINE Alu 1 290 -22 600 330 15 5 chr5 50362276 50362473 -152723059 - MIR SINE MIR -60 202 4 2179 72 20 7 chr5 50362984 50363277 -152722255 - AluY SINE Alu -14 297 1 202 304 0 0 chr5 50363519 50363575 -152721957 + MIR SINE MIR 38 93 -115 660 161 0 23 chr5 50365466 50365596 -152719936 - L1PA15 LINE L1 -1 6164 6038 564 109 22 0 chr5 50365653 50365745 -152719787 - L1PA15 LINE L1 -108 6057 5964 225 83 0 0 chr5 50367602 50367638 -152717894 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr5 50367661 50367683 -152717849 + AT_rich Low_complexity Low_complexity 1 22 0 444 261 70 9 chr5 50368556 50368671 -152716861 + L2 LINE L2 3192 3313 0 198 0 0 0 chr5 50368883 50368905 -152716627 + (A)n Simple_repeat Simple_repeat 1 22 0 1485 225 60 39 chr5 50370710 50371096 -152714436 - MSTD LTR MaLR -2 394 1 27 0 0 0 chr5 50371118 50371145 -152714387 + AT_rich Low_complexity Low_complexity 1 27 0 32 43 0 0 chr5 50371369 50371415 -152714117 + AT_rich Low_complexity Low_complexity 1 46 0 546 322 62 22 chr5 50371783 50372010 -152713522 + MIR SINE MIR 15 250 -12 682 171 0 8 chr5 50372243 50372398 -152713134 + FLAM_C SINE Alu 1 154 0 215 246 131 72 chr5 50373211 50373239 -152712293 - L2 LINE L2 -37 3276 3251 1063 206 140 58 chr5 50373239 50373603 -152711929 + MSTD LTR MaLR 3 396 0 215 246 131 72 chr5 50373603 50373782 -152711750 - L2 LINE L2 -62 3251 2979 262 301 14 0 chr5 50373815 50373888 -152711644 + GA-rich Low_complexity Low_complexity 4 77 0 21 71 0 0 chr5 50374382 50374424 -152711108 + AT_rich Low_complexity Low_complexity 1 42 0 225 232 0 87 chr5 50376321 50376390 -152709142 + L1MC4 LINE L1 7801 7863 -179 182 239 0 22 chr5 50377526 50377572 -152707960 + L2 LINE L2 3228 3272 0 2025 127 0 3 chr5 50377878 50378169 -152707363 + AluSg SINE Alu 1 290 -20 186 281 47 31 chr5 50379825 50379889 -152705643 - L2 LINE L2 -1 3271 3207 239 305 42 8 chr5 50379947 50380065 -152705467 - HAL1 LINE L1 -605 1902 1781 389 240 58 25 chr5 50380109 50380230 -152705302 - HAL1 LINE L1 -857 1650 1526 297 344 84 71 chr5 50381006 50381546 -152703986 + L2 LINE L2 2639 3184 -88 653 191 0 7 chr5 50381623 50381764 -152703768 + GA-rich Low_complexity Low_complexity 4 143 0 736 224 10 42 chr5 50384898 50385090 -152700442 + MLT1A2 LTR MaLR 174 359 -15 515 148 23 0 chr5 50385101 50385189 -152700343 + MLT1A2 LTR MaLR 285 374 0 235 205 108 36 chr5 50385430 50385453 -152700079 - MER46A DNA MER2_type -69 167 139 901 131 182 0 chr5 50385453 50385629 -152699903 + MER46B DNA MER2_type 1 83 -153 26 0 0 0 chr5 50385658 50385684 -152699848 + AT_rich Low_complexity Low_complexity 1 26 0 444 281 99 6 chr5 50388602 50388773 -152696759 + MIR SINE MIR 5 191 -71 5189 132 31 3 chr5 50389428 50390489 -152695043 - L1PA16 LINE L1 -2 6164 5108 16345 58 110 6 chr5 50390590 50392881 -152692651 - L1P LINE L1 -3618 2528 1 22 88 0 0 chr5 50393239 50393296 -152692236 + AT_rich Low_complexity Low_complexity 1 57 0 35 24 0 0 chr5 50393431 50393473 -152692059 + AT_rich Low_complexity Low_complexity 1 42 0 190 289 0 0 chr5 50394502 50394540 -152690992 + L2 LINE L2 3186 3223 -49 2098 112 3 19 chr5 50394692 50395005 -152690527 - AluSq SINE Alu -5 308 1 1382 91 0 67 chr5 50395451 50395661 -152689871 + AluSx SINE Alu 1 196 -116 281 300 100 0 chr5 50395750 50395830 -152689702 + MIR SINE MIR 41 128 -134 316 345 9 0 chr5 50395904 50396020 -152689512 + MIR SINE MIR 144 260 -2 774 245 170 43 chr5 50396279 50397015 -152688517 + L1MC5 LINE L1 7018 7846 -115 804 479 81 0 chr5 50397070 50397329 -152688203 - AluSq SINE Alu -31 282 3 7570 30 0 1 chr5 50397349 50398826 -152686706 - L1PA5 LINE L1 -2 6152 4676 242 241 0 0 chr5 50398992 50399046 -152686486 + (TA)n Simple_repeat Simple_repeat 2 55 0 357 351 80 69 chr5 50401328 50401908 -152683624 + L2 LINE L2 2656 3232 -40 216 0 0 0 chr5 50403798 50403822 -152681710 + (A)n Simple_repeat Simple_repeat 1 24 0 1737 252 14 0 chr5 50404598 50405042 -152680490 - L1P LINE L1 -1010 5136 4687 2069 105 7 14 chr5 50405108 50405402 -152680130 + AluY SINE Alu 1 292 -19 404 345 28 0 chr5 50406937 50407079 -152678453 - MIR SINE MIR -96 166 21 377 257 4 136 chr5 50409035 50409292 -152676240 + L2 LINE L2 2997 3219 -94 458 188 36 4 chr5 50410849 50410984 -152674548 + MER53 DNA DNA 1 189 0 548 79 0 0 chr5 50411496 50411572 -152673960 + L1MA1 LINE L1 6218 6293 -9 267 31 0 0 chr5 50413119 50413151 -152672381 + (TG)n Simple_repeat Simple_repeat 1 32 0 279 0 0 0 chr5 50413221 50413252 -152672280 + (TA)n Simple_repeat Simple_repeat 2 32 0 1743 106 73 7 chr5 50413340 50413615 -152671917 - AluSx SINE Alu -4 308 16 205 226 19 0 chr5 50414058 50414111 -152671421 + (TA)n Simple_repeat Simple_repeat 2 55 0 228 327 26 35 chr5 50417581 50417694 -152667838 + L2 LINE L2 3190 3301 -12 582 300 102 14 chr5 50417889 50418172 -152667360 - MLT1J LTR MaLR -197 314 7 391 149 14 27 chr5 50418260 50418334 -152667198 + L1MC4a LINE L1 6646 6718 -1090 948 140 38 0 chr5 50418335 50418521 -152667011 + L1MC3 LINE L1 6910 7102 -683 229 273 57 11 chr5 50418522 50418610 -152666922 + MLT1F1 LTR MaLR 42 133 -434 2054 198 70 16 chr5 50418613 50419168 -152666364 + L1MC3 LINE L1 7199 7783 -2 21 0 0 0 chr5 50419792 50419813 -152665719 + AT_rich Low_complexity Low_complexity 1 21 0 1859 171 19 6 chr5 50420696 50421012 -152664520 + MER1B DNA MER1_type 17 336 -3 266 353 103 16 chr5 50421517 50421701 -152663831 + L2 LINE L2 2589 2788 -526 268 325 181 19 chr5 50421995 50422155 -152663377 - L3 LINE CR1 -80 1497 1312 207 0 0 0 chr5 50424720 50424743 -152660789 + (A)n Simple_repeat Simple_repeat 1 23 0 261 273 71 20 chr5 50425366 50425465 -152660067 - MIR SINE MIR -86 176 73 815 259 94 31 chr5 50425512 50425767 -152659765 - MLT1G1 LTR MaLR -2 593 323 915 307 90 48 chr5 50425791 50426312 -152659220 - L2 LINE L2 -2303 1011 469 21 36 0 0 chr5 50426404 50426432 -152659100 + AT_rich Low_complexity Low_complexity 1 28 0 2254 136 13 18 chr5 50426583 50426972 -152658560 - L1PA15 LINE L1 -8 7576 7190 1128 82 0 0 chr5 50426989 50427135 -152658397 + AluY SINE Alu 150 295 -16 7958 170 16 30 chr5 50427139 50429078 -152656454 - L1PA15 LINE L1 -403 7181 5282 2294 108 13 53 chr5 50429078 50429457 -152656075 - THE1B LTR MaLR 0 364 1 7958 170 16 30 chr5 50429457 50429625 -152655907 - L1PA15 LINE L1 -2302 5282 5113 1255 234 1 16 chr5 50429654 50429981 -152655551 - L1PA15 LINE L1 -3778 3787 3475 306 180 16 49 chr5 50430124 50430185 -152655347 + L2 LINE L2 3249 3307 -6 244 277 99 10 chr5 50430998 50431099 -152654433 - MIR SINE MIR -2 260 151 24 32 0 0 chr5 50431481 50431512 -152654020 + AT_rich Low_complexity Low_complexity 1 31 0 370 291 35 50 chr5 50433147 50433288 -152652244 - MIR3 SINE MIR -47 161 23 1230 235 190 20 chr5 50434029 50434472 -152651060 - MLT1F LTR MaLR -6 536 19 2137 65 7 0 chr5 50434643 50434918 -152650614 + AluY SINE Alu 35 311 0 313 272 207 18 chr5 50434946 50435115 -152650417 + MIR SINE MIR 40 240 -22 34 42 0 0 chr5 50436235 50436283 -152649249 + AT_rich Low_complexity Low_complexity 1 48 0 225 127 28 42 chr5 50436283 50436354 -152649178 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 230 220 68 0 chr5 50436594 50436653 -152648879 + L2 LINE L2 3251 3313 0 441 171 0 0 chr5 50437369 50437457 -152648075 + GA-rich Low_complexity Low_complexity 3 90 0 24 0 0 0 chr5 50437969 50437993 -152647539 + AT_rich Low_complexity Low_complexity 1 24 0 301 245 32 0 chr5 50438526 50438620 -152646912 + (TA)n Simple_repeat Simple_repeat 1 97 0 412 292 42 92 chr5 50438623 50438883 -152646649 + MER102b DNA MER1_type 91 337 -4 21 57 0 0 chr5 50440286 50440321 -152645211 + AT_rich Low_complexity Low_complexity 1 35 0 230 356 11 0 chr5 50442286 50442373 -152643159 - L2 LINE L2 0 3272 3185 21 0 0 0 chr5 50442595 50442616 -152642916 + AT_rich Low_complexity Low_complexity 1 21 0 385 270 22 66 chr5 50442783 50442893 -152642639 - LTR33 LTR ERVL -305 216 112 1715 191 94 21 chr5 50442893 50443328 -152642204 - MLT1C LTR MaLR 0 467 1 385 270 22 66 chr5 50443328 50443354 -152642178 - LTR33 LTR ERVL -409 112 86 200 59 29 0 chr5 50444181 50444215 -152641317 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 227 235 20 0 chr5 50444370 50444421 -152641111 + MER58 DNA MER1_type 187 238 -2182 13208 32 4 0 chr5 50444444 50446800 -152638732 - L1PA3 LINE L1 -3 6152 3791 33 43 0 0 chr5 50447048 50447095 -152638437 + AT_rich Low_complexity Low_complexity 1 47 0 189 352 62 23 chr5 50447231 50447359 -152638173 - MIR3 SINE MIR -62 146 14 1367 222 22 41 chr5 50447384 50447753 -152637779 + MLT1A1 LTR MaLR 4 365 0 323 78 20 0 chr5 50448615 50448666 -152636866 + (TC)n Simple_repeat Simple_repeat 1 52 0 204 375 151 16 chr5 50448686 50448878 -152636654 + L2 LINE L2 3044 3261 -11 555 103 19 9 chr5 50449115 50449222 -152636310 + (TC)n Simple_repeat Simple_repeat 1 108 0 207 387 139 16 chr5 50449240 50449434 -152636098 + L2 LINE L2 3044 3261 -11 29 0 0 0 chr5 50449559 50449588 -152635944 + AT_rich Low_complexity Low_complexity 1 29 0 195 42 0 0 chr5 50451995 50452019 -152633513 + (TA)n Simple_repeat Simple_repeat 1 24 0 447 311 11 33 chr5 50452310 50452490 -152633042 - MIR SINE MIR -48 214 39 294 29 0 0 chr5 50452632 50452667 -152632865 + (CA)n Simple_repeat Simple_repeat 2 36 0 1853 142 3 3 chr5 50453340 50453636 -152631896 + AluSx SINE Alu 1 296 -16 187 317 49 49 chr5 50453665 50453807 -152631725 + L2 LINE L2 3079 3220 -93 228 411 46 29 chr5 50455236 50455411 -152630121 - MER91A DNA MER1_type -2 194 17 1893 134 3 31 chr5 50455696 50456017 -152629515 + AluSx SINE Alu 1 312 0 2137 117 0 0 chr5 50456898 50457188 -152628344 + AluSx SINE Alu 1 290 -22 868 273 81 73 chr5 50457453 50458664 -152626868 - L1ME LINE L1 -4687 1574 315 1426 75 11 0 chr5 50459109 50459296 -152626236 - AluSq SINE Alu 0 313 125 22 0 0 0 chr5 50459896 50459918 -152625614 + AT_rich Low_complexity Low_complexity 1 22 0 357 338 71 15 chr5 50459938 50460136 -152625396 - MIR SINE MIR 0 262 54 239 280 40 0 chr5 50460705 50460780 -152624752 + MIR SINE MIR 112 189 -73 109 36 0 12 chr5 50460875 50460963 -152624569 + AT_rich Low_complexity Low_complexity 1 88 -76 2421 63 0 10 chr5 50460963 50461265 -152624267 + AluY SINE Alu 1 299 -12 109 36 0 12 chr5 50461265 50461342 -152624190 + AT_rich Low_complexity Low_complexity 88 164 0 198 167 0 0 chr5 50461379 50461415 -152624117 + (CATA)n Simple_repeat Simple_repeat 1 36 0 423 0 0 0 chr5 50461502 50461549 -152623983 + (TA)n Simple_repeat Simple_repeat 2 48 0 369 0 0 0 chr5 50461759 50461800 -152623732 + (TA)n Simple_repeat Simple_repeat 2 42 0 286 321 0 0 chr5 50461810 50461919 -152623613 - L1ME LINE L1 -325 5796 5688 1733 179 0 20 chr5 50462166 50462468 -152623064 - AluJb SINE Alu -15 297 2 27 29 0 0 chr5 50463867 50463901 -152621631 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 50465148 50465171 -152620361 + AT_rich Low_complexity Low_complexity 1 23 0 216 167 0 0 chr5 50465358 50465406 -152620126 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 264 353 58 58 chr5 50466239 50466288 -152619244 + L2 LINE L2 1890 1938 -1376 7218 42 5 2 chr5 50466288 50467591 -152617941 - L1PA5 LINE L1 -3 6151 4851 264 353 58 58 chr5 50467591 50468040 -152617492 + L2 LINE L2 1937 2388 -926 187 232 36 0 chr5 50468576 50468632 -152616900 - MIR3 SINE MIR -2 206 149 195 378 0 10 chr5 50468654 50468752 -152616780 - L3 LINE CR1 -127 1450 1354 197 308 0 0 chr5 50468825 50468877 -152616655 + L2 LINE L2 2596 2647 -667 514 320 86 60 chr5 50469362 50469908 -152615624 - L3 LINE CR1 -674 903 344 12003 34 3 1 chr5 50470278 50472477 -152613055 + L1PA3 LINE L1 3933 6134 -21 4982 30 8 2 chr5 50472579 50473185 -152612347 + L1PA4 LINE L1 5544 6153 -2 189 416 65 0 chr5 50473947 50474101 -152611431 + L3 LINE CR1 35 198 -1379 306 311 11 0 chr5 50475492 50475582 -152609950 + MER34 LTR ERV1 5 95 -447 * 532 212 94 89 chr5 50475571 50475990 -152609542 + LTR48B LTR ERV1 157 596 -48 661 142 15 97 chr5 50476049 50476183 -152609349 + MER2 DNA MER2_type 2 124 -221 * 783 168 7 0 chr5 50476169 50476312 -152609220 + MER2 DNA MER2_type 66 209 -136 222 366 0 0 chr5 50476808 50476879 -152608653 + L3 LINE CR1 1498 1568 -9 3668 179 11 67 chr5 50477553 50478820 -152606712 + L1 LINE L1 4114 5222 -924 201 263 0 0 chr5 50479722 50479779 -152605753 + T-rich Low_complexity Low_complexity 1 57 0 13426 141 26 41 chr5 50480022 50481300 -152604232 + Tigger1 DNA MER2_type 1 1224 -1194 1205 234 59 31 chr5 50481300 50481590 -152603942 - AluJo SINE Alu -4 298 1 13426 141 26 41 chr5 50481590 50482764 -152602768 + Tigger1 DNA MER2_type 1224 2415 -3 22 35 0 0 chr5 50482827 50482856 -152602676 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 50483174 50483201 -152602331 + AT_rich Low_complexity Low_complexity 1 27 0 316 261 23 13 chr5 50483516 50483714 -152601818 + MER114 LTR ERV 20 254 -394 27 0 0 0 chr5 50483902 50483929 -152601603 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr5 50483956 50483988 -152601544 + AT_rich Low_complexity Low_complexity 1 32 0 1034 264 130 60 chr5 50484328 50484858 -152600674 + MER21B LTR ERV1 141 707 -156 734 192 0 0 chr5 50485034 50485154 -152600378 + FLAM_C SINE Alu 1 120 -23 230 0 33 0 chr5 50485154 50485184 -152600348 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2215 105 3 6 chr5 50485823 50486137 -152599395 + AluSq SINE Alu 1 313 0 1818 55 102 0 chr5 50486920 50487156 -152598376 - AluY SINE Alu -16 295 36 1415 166 79 4 chr5 50488197 50488462 -152597070 + AluJo SINE Alu 2 286 -26 275 258 112 0 chr5 50489903 50489992 -152595540 - L2 LINE L2 -9 3304 3206 387 0 0 0 chr5 50490214 50490257 -152595275 + (CA)n Simple_repeat Simple_repeat 2 44 0 282 56 0 0 chr5 50490563 50490599 -152594933 + (CA)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr5 50490787 50490810 -152594722 + AT_rich Low_complexity Low_complexity 1 23 0 529 215 60 40 chr5 50491100 50491249 -152594283 + MIR SINE MIR 111 262 0 563 212 180 58 chr5 50491441 50491630 -152593902 + MER39 LTR ERV1 6 217 -490 1105 239 113 19 chr5 50491684 50492002 -152593530 + MER39 LTR ERV1 358 705 -2 26 0 0 0 chr5 50492183 50492209 -152593323 + AT_rich Low_complexity Low_complexity 1 26 0 339 96 0 0 chr5 50492451 50492503 -152593029 + (CAT)n Simple_repeat Simple_repeat 1 52 0 257 250 0 0 chr5 50492818 50492874 -152592658 + CT-rich Low_complexity Low_complexity 1 56 0 318 294 64 43 chr5 50493875 50494226 -152591306 + MLT1L LTR MaLR 134 518 -97 2044 131 7 3 chr5 50494277 50494574 -152590958 + AluSq SINE Alu 4 301 -12 485 270 104 52 chr5 50495360 50495649 -152589883 - L2 LINE L2 0 3313 3010 25 31 0 0 chr5 50496573 50496605 -152588927 + AT_rich Low_complexity Low_complexity 1 32 0 14304 138 22 19 chr5 50496784 50497947 -152587585 + Tigger1 DNA MER2_type 1 1159 -1259 2144 53 21 0 chr5 50497947 50498230 -152587302 + L1PA4 LINE L1 5867 6155 0 14304 138 22 19 chr5 50498230 50499475 -152586057 + Tigger1 DNA MER2_type 1159 2417 -1 724 282 31 18 chr5 50501230 50501457 -152584075 - MIR SINE MIR -1 261 32 23 0 0 0 chr5 50501516 50501539 -152583993 + AT_rich Low_complexity Low_complexity 1 23 0 1250 219 50 75 chr5 50502725 50503164 -152582368 + MLT1D LTR MaLR 7 434 -71 42551 51 8 2 chr5 50503178 50509313 -152576219 - L1PA4 LINE L1 0 6155 1 403 148 0 0 chr5 50509317 50509378 -152576154 + MLT1D LTR MaLR 445 505 0 5557 46 0 0 chr5 50509673 50510350 -152575182 + L1PA5 LINE L1 5476 6152 -2 1217 263 9 22 chr5 50510408 50510724 -152574808 + MLT1A1 LTR MaLR 10 321 -44 863 231 158 9 chr5 50510777 50511119 -152574413 - MER20B DNA MER1_type -89 694 302 232 265 84 0 chr5 50511127 50511210 -152574322 - MER20B DNA MER1_type -611 172 83 230 306 99 36 chr5 50511248 50511359 -152574173 + L2 LINE L2 2957 3074 -198 192 77 0 0 chr5 50511604 50511630 -152573902 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 5576 158 22 65 chr5 50512937 50513475 -152572057 - L1MC1 LINE L1 -18 6315 5755 1336 178 123 19 chr5 50513475 50513744 -152571788 - AluJo SINE Alu -5 297 1 5576 158 22 65 chr5 50513744 50514879 -152570653 - L1MC1 LINE L1 -578 5755 4709 30 27 0 0 chr5 50515639 50515676 -152569856 + AT_rich Low_complexity Low_complexity 1 37 0 297 169 0 0 chr5 50515832 50515891 -152569641 + (CA)n Simple_repeat Simple_repeat 1 59 0 429 20 0 0 chr5 50515934 50515984 -152569548 + (TC)n Simple_repeat Simple_repeat 1 50 0 279 0 0 0 chr5 50515983 50516014 -152569518 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 225 65 0 0 chr5 50516280 50516311 -152569221 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1975 143 0 4 chr5 50516315 50516616 -152568916 - AluSx SINE Alu 0 302 3 1098 156 0 0 chr5 50517986 50518146 -152567386 - AluSg/x SINE Alu -18 292 133 2155 82 7 30 chr5 50518537 50518840 -152566692 - AluY SINE Alu -15 296 1 407 214 0 0 chr5 50518842 50518912 -152566620 + Tigger5 DNA MER2_type 2254 2323 0 203 299 144 10 chr5 50518912 50519009 -152566523 + MIR SINE MIR 150 259 -3 13454 71 33 2 chr5 50519628 50522194 -152563338 + L1PA6 LINE L1 3559 6152 -2 189 107 0 0 chr5 50522827 50522855 -152562677 + (CA)n Simple_repeat Simple_repeat 2 29 0 192 250 78 0 chr5 50524066 50524130 -152561402 + MIR3 SINE MIR 105 173 -35 2111 151 20 59 chr5 50524448 50524501 -152561031 + MLT1B LTR MaLR 3 57 -333 2011 131 53 11 chr5 50524501 50524860 -152560672 + THE1C LTR MaLR 1 374 -1 2111 151 20 59 chr5 50524860 50525210 -152560322 + MLT1B LTR MaLR 57 390 0 25 0 0 0 chr5 50526153 50526178 -152559354 + AT_rich Low_complexity Low_complexity 1 25 0 481 290 31 67 chr5 50526832 50527025 -152558507 - MIR SINE MIR -69 193 8 312 254 105 92 chr5 50527911 50528348 -152557184 + L1ME4a LINE L1 5590 6032 -89 200 222 0 0 chr5 50528990 50529035 -152556497 + A-rich Low_complexity Low_complexity 1 45 0 189 107 0 0 chr5 50529339 50529367 -152556165 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 231 297 91 11 chr5 50529497 50529672 -152555860 + L1ME LINE L1 2934 3122 -3024 360 245 130 36 chr5 50529949 50530141 -152555391 + L1ME LINE L1 3633 3842 -2304 189 163 0 0 chr5 50530222 50530271 -152555261 + (TA)n Simple_repeat Simple_repeat 1 49 0 1455 284 71 32 chr5 50530285 50530996 -152554536 + L1ME LINE L1 3896 4650 -1496 398 52 0 17 chr5 50530996 50531054 -152554478 + (TG)n Simple_repeat Simple_repeat 1 57 0 1455 284 71 32 chr5 50531054 50531225 -152554307 + L1ME LINE L1 4650 4813 -1333 230 227 13 107 chr5 50531381 50531531 -152554001 + L1ME LINE L1 5106 5241 -905 905 265 108 14 chr5 50531570 50531985 -152553547 + L1ME LINE L1 5317 5770 -400 270 348 63 48 chr5 50532304 50532511 -152553021 - L2 LINE L2 -35 3237 3028 313 203 30 23 chr5 50533101 50533234 -152552298 + (TA)n Simple_repeat Simple_repeat 2 135 0 24 67 0 0 chr5 50533258 50533303 -152552229 + AT_rich Low_complexity Low_complexity 1 45 0 1089 166 10 10 chr5 50533694 50533893 -152551639 - AluJb SINE Alu -9 303 105 2007 156 0 0 chr5 50533909 50534217 -152551315 - AluSx SINE Alu -4 308 1 3230 19 0 3 chr5 50535651 50536030 -152549502 - L1PA2 LINE L1 -2 6153 5776 3260 14 0 0 chr5 50536030 50536400 -152549132 + L1PA2 LINE L1 5412 5781 -374 23 0 0 0 chr5 50536416 50536439 -152549093 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 50537718 50537744 -152547788 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 181 290 8 105 chr5 50539771 50539895 -152545637 + MIR SINE MIR 10 121 -141 553 278 128 32 chr5 50539895 50540208 -152545324 - MLT1J2 LTR MaLR 0 450 108 221 327 64 39 chr5 50540275 50540431 -152545101 + MIR SINE MIR 103 262 0 22 0 0 0 chr5 50540490 50540512 -152545020 + AT_rich Low_complexity Low_complexity 1 22 0 230 320 81 29 chr5 50540568 50540740 -152544792 - L2 LINE L2 0 3313 3133 222 294 35 35 chr5 50541065 50541150 -152544382 - L2 LINE L2 -511 2803 2719 310 190 4 21 chr5 50541287 50541360 -152544172 + L1MD3 LINE L1 7333 7598 -385 313 356 110 32 chr5 50541363 50541672 -152543860 - L2 LINE L2 -777 2537 2205 2690 180 182 144 chr5 50541879 50542442 -152543090 + L1MD3 LINE L1 6686 7227 -768 621 225 16 0 chr5 50542442 50542571 -152542961 + MLT1F1 LTR MaLR 1 131 -436 2690 180 182 144 chr5 50542571 50543140 -152542392 + L1MD3 LINE L1 7227 7993 -2 23 54 0 0 chr5 50543204 50543241 -152542291 + AT_rich Low_complexity Low_complexity 1 37 0 373 218 0 13 chr5 50543508 50543586 -152541946 - L2 LINE L2 0 3313 3237 391 298 112 0 chr5 50543590 50543751 -152541781 - MIR3 SINE MIR -20 188 10 291 309 75 0 chr5 50543987 50544081 -152541451 - MIR SINE MIR -72 136 36 1833 50 67 8 chr5 50544627 50544867 -152540665 + AluY SINE Alu 39 292 -19 225 79 0 79 chr5 50545901 50545939 -152539593 + L2 LINE L2 3236 3270 -2 210 311 19 68 chr5 50545942 50546045 -152539487 + MIR SINE MIR 33 130 -132 1142 323 93 11 chr5 50546300 50547073 -152538459 - L2 LINE L2 -4 3309 2463 832 328 55 37 chr5 50547086 50547543 -152537989 - L2 LINE L2 -2812 502 38 284 145 0 20 chr5 50547706 50547763 -152537769 + Alu SINE Alu 1 44 -259 1324 148 0 0 chr5 50547763 50547987 -152537545 + AluSg/x SINE Alu 93 316 0 293 319 135 18 chr5 50548645 50548808 -152536724 - MIR SINE MIR -32 230 49 262 332 243 20 chr5 50549013 50549417 -152536115 - L2 LINE L2 -6 3307 2814 23 0 0 0 chr5 50549491 50549514 -152536018 + AT_rich Low_complexity Low_complexity 1 23 0 243 224 67 75 chr5 50549584 50549718 -152535814 - L1MC4 LINE L1 -1339 6703 6571 1512 276 53 23 chr5 50551211 50551344 -152534188 + L1M4 LINE L1 2143 2271 -3875 1860 139 26 16 chr5 50551344 50551653 -152533879 + AluSq SINE Alu 1 312 -1 1512 276 53 23 chr5 50551653 50552117 -152533415 + L1M4 LINE L1 2271 2758 -3388 682 289 22 55 chr5 50552897 50553132 -152532400 + MIR SINE MIR 14 238 -24 240 363 0 0 chr5 50553361 50553441 -152532091 + L2 LINE L2 2986 3065 -207 25 0 0 0 chr5 50553464 50553489 -152532043 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr5 50553577 50553614 -152531918 + AT_rich Low_complexity Low_complexity 1 37 0 882 312 55 6 chr5 50553855 50554185 -152531347 + MLT1I LTR MaLR 13 358 -51 228 35 0 0 chr5 50554931 50554960 -152530572 + (TG)n Simple_repeat Simple_repeat 2 30 0 31 0 0 0 chr5 50555937 50555968 -152529564 + AT_rich Low_complexity Low_complexity 1 31 0 1350 197 49 28 chr5 50559217 50559501 -152526031 + AluJo SINE Alu 1 290 -22 228 304 141 11 chr5 50560050 50560142 -152525390 - L2 LINE L2 -6 3266 3163 394 363 91 19 chr5 50560524 50560833 -152524699 - L2 LINE L2 -556 2758 2428 1907 104 4 4 chr5 50561272 50561541 -152523991 + AluSx SINE Alu 1 269 -43 1312 168 12 4 chr5 50563226 50563482 -152522050 - AluSq SINE Alu -12 301 44 379 297 69 53 chr5 50566379 50566625 -152518907 - L1ME LINE L1 -524 5597 5348 650 191 0 37 chr5 50566871 50567007 -152518525 - FLAM_C SINE Alu -1 132 2 261 286 60 28 chr5 50567008 50567225 -152518307 - L1ME LINE L1 -1455 4691 4468 613 293 93 59 chr5 50567233 50567285 -152518247 - L1ME LINE L1 -1625 4521 4472 2086 96 24 7 chr5 50567285 50567577 -152517955 - AluY SINE Alu -14 297 1 613 293 93 59 chr5 50567577 50568172 -152517360 - L1ME LINE L1 -1674 4472 3852 313 257 6 94 chr5 50568621 50568652 -152516880 - L1ME LINE L1 -2847 3299 3267 2227 66 0 13 chr5 50568652 50568981 -152516551 - L1PA5 LINE L1 0 6154 5858 313 257 6 94 chr5 50568981 50569120 -152516412 - L1ME LINE L1 -2879 3267 3144 23 68 0 0 chr5 50569293 50569337 -152516195 + AT_rich Low_complexity Low_complexity 1 44 0 24 96 0 0 chr5 50569531 50569604 -152515928 + AT_rich Low_complexity Low_complexity 1 73 0 23 0 0 0 chr5 50569698 50569721 -152515811 + AT_rich Low_complexity Low_complexity 1 23 0 211 231 26 137 chr5 50569776 50569805 -152515727 - L2 LINE L2 0 3313 3282 2083 118 0 13 chr5 50569805 50570110 -152515422 + AluY SINE Alu 3 303 -8 211 231 26 137 chr5 50570110 50570197 -152515335 - L2 LINE L2 -31 3282 3210 21 36 0 0 chr5 50570205 50570233 -152515299 + AT_rich Low_complexity Low_complexity 1 28 0 234 314 186 10 chr5 50570853 50571047 -152514485 + L2 LINE L2 3073 3300 -13 195 42 0 0 chr5 50571047 50571071 -152514461 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 243 321 134 43 chr5 50571303 50571512 -152514020 - MIR SINE MIR -32 230 3 21 36 0 0 chr5 50572252 50572280 -152513252 + AT_rich Low_complexity Low_complexity 1 28 0 746 282 86 67 chr5 50572633 50573144 -152512388 + LTR33 LTR ERVL 1 521 0 668 282 183 41 chr5 50573493 50574131 -152511401 + L2 LINE L2 2575 3312 -1 23 33 0 0 chr5 50574210 50574240 -152511292 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 50574488 50574518 -152511014 + AT_rich Low_complexity Low_complexity 1 30 0 2257 92 0 30 chr5 50575154 50575489 -152510043 + L1PA8A LINE L1 5807 6131 0 2026 118 28 0 chr5 50576056 50576343 -152509189 + AluSx SINE Alu 10 304 -8 321 274 29 29 chr5 50576584 50576686 -152508846 + L2 LINE L2 3177 3278 -35 758 237 260 11 chr5 50576767 50577125 -152508407 + LTR50 LTR ERVL 9 455 -340 387 217 49 120 chr5 50577545 50577735 -152507797 + MER69A DNA AcHobo 3 173 -4 363 189 79 8 chr5 50578473 50578600 -152506932 - MER114 LTR ERV -363 285 150 22 56 0 0 chr5 50578649 50578685 -152506847 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 50578713 50578734 -152506798 + AT_rich Low_complexity Low_complexity 1 21 0 811 328 35 15 chr5 50578859 50579264 -152506268 + ERVL LTR ERVL 2180 2592 -3172 301 341 45 0 chr5 50580436 50580568 -152504964 - MER117 DNA MER1_type -58 139 2 23 0 0 0 chr5 50581182 50581205 -152504327 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr5 50581560 50581605 -152503927 + AT_rich Low_complexity Low_complexity 1 45 0 215 206 15 44 chr5 50582114 50582182 -152503350 + CT-rich Low_complexity Low_complexity 2 67 0 243 273 102 0 chr5 50582204 50582292 -152503240 - MIR SINE MIR -1 261 165 1499 196 52 0 chr5 50582539 50582809 -152502723 - AluJb SINE Alu -28 284 1 22 35 0 0 chr5 50582862 50582891 -152502641 + AT_rich Low_complexity Low_complexity 1 29 0 2068 98 0 34 chr5 50583126 50583458 -152502074 + AluSx SINE Alu 1 322 0 186 303 76 25 chr5 50583952 50584071 -152501461 + MIR SINE MIR 126 250 -12 253 315 87 0 chr5 50584938 50585030 -152500502 + L2 LINE L2 2433 2532 -782 * 383 211 73 151 chr5 50585029 50585247 -152500285 - L2 LINE L2 0 3313 3113 253 179 18 89 chr5 50585304 50585416 -152500116 - L2 LINE L2 -3110 204 101 269 359 111 38 chr5 50585638 50586192 -152499340 + L2 LINE L2 2594 3228 -44 1909 128 35 0 chr5 50586819 50587101 -152498431 - AluSx SINE Alu -20 292 1 426 280 143 35 chr5 50587576 50587809 -152497723 - MIR SINE MIR -14 248 1 249 276 23 180 chr5 50587943 50588160 -152497372 - L2 LINE L2 0 3313 3131 1063 314 58 30 chr5 50588378 50588808 -152496724 - L2 LINE L2 -507 2807 2366 324 206 20 10 chr5 50588938 50589040 -152496492 + CT-rich Low_complexity Low_complexity 4 106 0 306 50 0 0 chr5 50589202 50589242 -152496290 + (T)n Simple_repeat Simple_repeat 1 40 0 280 286 9 54 chr5 50590705 50590817 -152494715 - MIR SINE MIR 0 262 156 360 43 0 0 chr5 50591162 50591208 -152494324 + (CA)n Simple_repeat Simple_repeat 2 47 0 994 251 117 108 chr5 50591353 50592167 -152493365 + L1MC4 LINE L1 6411 7231 -811 213 65 0 0 chr5 50592238 50592269 -152493263 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr5 50592467 50592489 -152493043 + AT_rich Low_complexity Low_complexity 1 22 0 6735 175 54 66 chr5 50593555 50595545 -152489987 + L1MCa LINE L1 1 2062 -4364 347 41 20 0 chr5 50595545 50595594 -152489938 + (TA)n Simple_repeat Simple_repeat 1 50 0 6735 175 54 66 chr5 50595594 50595643 -152489889 + L1MCa LINE L1 2062 2110 -4316 27 0 0 0 chr5 50596278 50596305 -152489227 + AT_rich Low_complexity Low_complexity 1 27 0 2776 178 24 12 chr5 50596504 50597009 -152488523 - MER44D DNA MER2_type -38 567 2 1239 169 36 10 chr5 50597019 50597327 -152488205 + L1MCa LINE L1 2117 2432 -3994 1365 171 98 0 chr5 50597328 50597602 -152487930 + L1MC1 LINE L1 6029 6329 -4 2156 109 0 3 chr5 50598408 50598731 -152486801 - AluSg SINE Alu 0 322 1 881 233 79 19 chr5 50599060 50599398 -152486134 - MSTD LTR MaLR -6 390 1 2457 58 10 0 chr5 50600404 50600699 -152484833 - AluY SINE Alu -13 298 1 24 0 0 0 chr5 50600742 50600766 -152484766 + AT_rich Low_complexity Low_complexity 1 24 0 205 173 74 0 chr5 50601421 50601502 -152484030 + (TATAA)n Simple_repeat Simple_repeat 3 89 0 261 330 11 11 chr5 50601932 50602023 -152483509 + Zaphod DNA AcHobo 1 91 -3940 1523 187 42 3 chr5 50602062 50602386 -152483146 + AluJb SINE Alu 1 312 0 387 73 0 0 chr5 50602487 50602542 -152482990 + (TG)n Simple_repeat Simple_repeat 2 56 0 335 235 141 0 chr5 50602941 50603026 -152482506 + Zaphod DNA AcHobo 3935 4031 0 608 319 82 14 chr5 50603464 50603840 -152481692 - L2 LINE L2 -278 3035 2626 1441 179 7 26 chr5 50604109 50604382 -152481150 - AluJb SINE Alu -44 268 1 34 0 0 0 chr5 50604607 50604641 -152480891 + AT_rich Low_complexity Low_complexity 1 34 0 297 303 11 0 chr5 50604646 50604735 -152480797 - Charlie7 DNA MER1_type -2517 95 6 216 196 54 0 chr5 50605250 50605306 -152480226 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 867 168 78 8 chr5 50607430 50607724 -152477808 - LTR47A LTR ERVL -86 366 1 972 178 12 100 chr5 50607741 50607982 -152477550 - MER4B-int LTR ERV1 -699 6059 5840 315 252 7 72 chr5 50608011 50608150 -152477382 - MER4B-int LTR ERV1 -918 5840 5711 192 77 0 0 chr5 50608313 50608339 -152477193 + (T)n Simple_repeat Simple_repeat 1 26 0 422 125 29 87 chr5 50608339 50608402 -152477130 - MER4D LTR ERV1 -32 840 784 589 45 22 11 chr5 50608402 50608491 -152477041 + (TTTTA)n Simple_repeat Simple_repeat 1 90 0 422 125 29 87 chr5 50608491 50608531 -152477001 - MER4D LTR ERV1 -88 784 743 42896 47 5 0 chr5 50608531 50614592 -152470940 - L1PA3 LINE L1 -64 6091 3 1636 146 86 50 chr5 50615122 50615484 -152470048 - THE1C LTR MaLR 0 375 1 9555 128 12 41 chr5 50615484 50615663 -152469869 - THE1C-int LTR MaLR 0 1580 1397 1557 121 0 13 chr5 50615663 50615894 -152469638 + AluY SINE Alu 84 311 0 9555 128 12 41 chr5 50615894 50617340 -152468192 - THE1C-int LTR MaLR -183 1397 3 1706 180 44 25 chr5 50617357 50617718 -152467814 - THE1C LTR MaLR -7 368 1 210 150 0 0 chr5 50617989 50618029 -152467503 + (GA)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr5 50618034 50618063 -152467469 + AT_rich Low_complexity Low_complexity 1 29 0 1578 226 11 88 chr5 50619125 50619447 -152466085 - L1MCa LINE L1 -3434 2992 2738 1966 102 0 14 chr5 50619447 50619722 -152465810 - AluY SINE Alu -7 304 34 1578 226 11 88 chr5 50619722 50620013 -152465519 - L1MCa LINE L1 -3688 2738 2426 1157 85 18 6 chr5 50620015 50620180 -152465352 + MER30 DNA MER1_type 1 167 -63 341 250 36 0 chr5 50620318 50620430 -152465102 - L1MCa LINE L1 -4253 2173 2058 5975 201 74 8 chr5 50620433 50621634 -152463898 - L1MCa LINE L1 -4653 1954 460 2035 118 33 13 chr5 50621634 50621940 -152463592 - AluSq SINE Alu -1 312 1 5975 201 74 8 chr5 50621940 50622171 -152463361 - L1MCa LINE L1 -6147 460 246 681 168 0 0 chr5 50622206 50622319 -152463213 - FRAM SINE Alu -1 175 63 967 238 21 8 chr5 50622414 50622649 -152462883 - L1MCa LINE L1 -6188 238 1 1257 209 4 48 chr5 50623808 50624081 -152461451 + AluJo SINE Alu 1 261 -51 8891 211 40 28 chr5 50624081 50625418 -152460114 - L1PA15-16 LINE L1 -1759 5103 3784 2105 93 4 0 chr5 50625418 50625686 -152459846 - AluSg SINE Alu -9 301 33 8891 211 40 28 chr5 50625686 50626742 -152458790 - L1PA15-16 LINE L1 -3078 3784 2742 378 0 0 0 chr5 50626742 50626784 -152458748 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7068 50 3 17 chr5 50626784 50628166 -152457366 - L1PA7 LINE L1 -16 6138 4764 8891 211 40 28 chr5 50628166 50631744 -152453788 - L1PA15-16 LINE L1 -4119 2743 6 22 0 0 0 chr5 50632319 50632341 -152453191 + AT_rich Low_complexity Low_complexity 1 22 0 1911 93 12 4 chr5 50632987 50633244 -152452288 - AluSq SINE Alu -11 302 44 730 316 20 0 chr5 50635978 50636231 -152449301 + MIR SINE MIR 5 262 0 24 0 0 0 chr5 50637350 50637374 -152448158 + AT_rich Low_complexity Low_complexity 1 24 0 1271 101 11 17 chr5 50638773 50638952 -152446580 - AluSq SINE Alu -2 311 134 790 316 36 45 chr5 50639826 50640360 -152445172 + L2 LINE L2 2059 2587 -727 229 353 72 13 chr5 50640366 50640519 -152445013 + MIR SINE MIR 73 234 -28 1600 181 65 6 chr5 50641661 50641986 -152443546 - L1MC1 LINE L1 -2 6331 5988 244 301 126 5 chr5 50642518 50642616 -152442916 + MIR SINE MIR 24 131 -77 216 97 0 0 chr5 50643901 50643932 -152441600 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 211 333 51 68 chr5 50644659 50644995 -152440537 + L2 LINE L2 1941 2270 -1044 1836 31 5 5 chr5 50646113 50646357 -152439175 + L1PA3 LINE L1 5922 6165 0 21 57 0 0 chr5 50646733 50646768 -152438764 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr5 50647638 50647685 -152437847 + AT_rich Low_complexity Low_complexity 1 47 0 180 241 51 89 chr5 50648377 50648456 -152437076 - L2 LINE L2 -36 3277 3202 26 0 0 0 chr5 50649924 50649950 -152435582 + AT_rich Low_complexity Low_complexity 1 26 0 6932 34 5 1 chr5 50650017 50650854 -152434678 + L1PA3 LINE L1 4355 5194 -952 * 42840 33 21 1 chr5 50650853 50656883 -152428649 + L1PA2 LINE L1 1 6155 0 7624 27 1 0 chr5 50656894 50657871 -152427661 + L1PA3 LINE L1 5175 6152 -3 213 329 51 70 chr5 50659031 50659189 -152426343 + L2 LINE L2 3118 3272 0 199 363 39 49 chr5 50659256 50659460 -152426072 + L3 LINE CR1 1065 1266 -311 347 335 20 55 chr5 50660262 50660462 -152425070 - MIR SINE MIR -50 212 20 1807 138 72 33 chr5 50660621 50660982 -152424550 + THE1C LTR MaLR 1 375 0 460 304 154 37 chr5 50661641 50662075 -152423457 - L2 LINE L2 -757 2557 2073 207 0 0 0 chr5 50662633 50662656 -152422876 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 235 376 20 27 chr5 50663591 50663740 -152421792 + L2 LINE L2 2942 3089 -183 232 356 48 19 chr5 50663866 50663970 -152421562 + L2 LINE L2 3144 3250 -22 2923 207 135 14 chr5 50665228 50666072 -152419460 - L1MC3 LINE L1 0 7785 6840 230 93 0 23 chr5 50666545 50666588 -152418944 + (TA)n Simple_repeat Simple_repeat 2 43 0 651 208 0 31 chr5 50667206 50667336 -152418196 + FLAM_C SINE Alu 1 126 -17 21 0 0 0 chr5 50667342 50667363 -152418169 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 50668826 50668856 -152416676 + AT_rich Low_complexity Low_complexity 1 30 0 201 191 59 0 chr5 50669292 50669360 -152416172 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 375 316 53 81 chr5 50669475 50669760 -152415772 + L2 LINE L2 2987 3263 -9 441 54 0 0 chr5 50670384 50670440 -152415092 + (CA)n Simple_repeat Simple_repeat 2 57 0 640 305 63 5 chr5 50671539 50671762 -152413770 + MIR SINE MIR 8 243 -19 21 89 0 0 chr5 50672737 50672793 -152412739 + AT_rich Low_complexity Low_complexity 1 56 0 1768 194 47 6 chr5 50674422 50674762 -152410770 + MLT1A1 LTR MaLR 12 365 0 351 65 0 0 chr5 50674772 50674818 -152410714 + (TA)n Simple_repeat Simple_repeat 2 47 0 316 205 46 178 chr5 50675056 50675315 -152410217 - L2 LINE L2 -1 3312 3088 317 318 136 11 chr5 50675358 50675534 -152409998 - L1ME LINE L1 -382 5739 5542 34 42 0 0 chr5 50675631 50675679 -152409853 + AT_rich Low_complexity Low_complexity 1 48 0 1821 162 0 13 chr5 50676181 50676484 -152409048 - AluJo SINE Alu -11 301 3 2062 145 0 3 chr5 50677094 50677398 -152408134 + AluSx SINE Alu 1 303 -9 2105 116 7 0 chr5 50677949 50678242 -152407290 + AluSp SINE Alu 3 297 -16 23 54 0 0 chr5 50678621 50678658 -152406874 + AT_rich Low_complexity Low_complexity 1 37 0 181 250 62 21 chr5 50678667 50678715 -152406817 - MIR SINE MIR -170 92 43 1398 294 136 43 chr5 50678779 50680285 -152405247 - HAL1 LINE L1 -55 2452 807 271 309 24 32 chr5 50680833 50680956 -152404576 + MIR3 SINE MIR 40 161 -47 2635 169 34 20 chr5 50681136 50681688 -152403844 + L1MB8 LINE L1 5618 6177 -1 917 81 0 0 chr5 50681705 50681829 -152403703 + L1PA11 LINE L1 6051 6174 0 21 0 0 0 chr5 50681948 50681969 -152403563 + AT_rich Low_complexity Low_complexity 1 21 0 431 369 54 22 chr5 50682023 50682375 -152403157 - L2 LINE L2 -256 3016 2660 21 0 0 0 chr5 50682743 50682764 -152402768 + AT_rich Low_complexity Low_complexity 1 21 0 294 291 43 7 chr5 50689491 50689632 -152395900 + L1ME LINE L1 5672 5817 -304 2112 110 3 10 chr5 50690474 50690774 -152394758 - AluSx SINE Alu -14 298 1 1622 76 5 9 chr5 50691070 50691294 -152394238 - L1PA8 LINE L1 0 6172 5950 264 308 59 11 chr5 50691307 50691580 -152393952 - L1M4 LINE L1 -1555 4591 4306 32 43 0 0 chr5 50692977 50693023 -152392509 + AT_rich Low_complexity Low_complexity 1 46 0 1002 317 29 63 chr5 53695558 53696069 -149389463 + L2 LINE L2 2820 3313 0 18907 80 2 9 chr5 53696119 53698633 -149386899 + L1P LINE L1 1 2495 -3651 5677 115 108 85 chr5 53698635 53700130 -149385402 + pTR5 LTR ERV1 743 2438 0 36662 95 4 11 chr5 53700133 53705114 -149380418 + HERV9 LTR ERV1 1 4944 -3455 665 130 235 12 chr5 53705115 53705362 -149380170 + HERV9 LTR ERV1 840 1141 -5755 356 161 0 0 chr5 53705360 53705422 -149380110 + HERV9 LTR ERV1 7503 7564 -835 * 6277 106 71 56 chr5 53705418 53707368 -149378164 + pTR5 LTR ERV1 66 8399 0 23319 76 1 3 chr5 53707372 53711009 -149374523 + L1PA4 LINE L1 2501 6154 -1 1084 175 5 5 chr5 53711044 53712144 -149373388 + ALR/Alpha Satellite centromeric 1 1099 -29 1042 166 1 0 chr5 53712244 53712970 -149372562 + ALR/Alpha Satellite centromeric 1 726 -26 5400 82 1 0 chr5 53713016 53713700 -149371832 - L1PA4 LINE L1 0 6155 5471 1114 176 4 3 chr5 53713700 53715822 -149369710 + ALR/Alpha Satellite centromeric 1 2123 -49 274 229 74 25 chr5 53716004 53716126 -149369406 + ALR/Alpha Satellite centromeric 32 159 -12 1250 159 1 4 chr5 53716237 53720469 -149365063 - ALR/Alpha Satellite centromeric 0 4222 1 23490 76 2 3 chr5 53720481 53723537 -149361995 + L1P LINE L1 7 3059 -3087 1165 167 5 1 chr5 53723551 53728796 -149356736 - ALR/Alpha Satellite centromeric -1 5262 1 18192 73 6 2 chr5 53728964 53731525 -149354007 + L1P2 LINE L1 2955 5524 -630 1117 161 5 8 chr5 53731625 53731663 -149353869 - ALR/Alpha Satellite centromeric 0 3278 3241 4661 55 7 40 chr5 53731663 53732268 -149353264 + L1PA4 LINE L1 5568 6152 -3 1117 161 5 8 chr5 53732268 53734915 -149350617 - ALR/Alpha Satellite centromeric -37 3241 1 1233 159 5 4 chr5 53735056 53740238 -149345294 - ALR/Alpha Satellite centromeric -8 5190 1 24703 70 9 0 chr5 53740338 53743525 -149342007 - L1P LINE L1 -2929 3217 2 1497 289 46 45 chr5 53743529 53744670 -149340862 - L1M3d LINE L1 -4752 1149 1 1561 128 0 0 chr5 53745510 53745728 -149339804 + AluSx SINE Alu 1 218 -94 246 62 0 0 chr5 53745742 53745774 -149339758 + (A)n Simple_repeat Simple_repeat 1 32 0 3902 34 21 0 chr5 53745987 53746459 -149339073 - L1PA4 LINE L1 -293 5862 5381 2456 253 25 90 chr5 53746458 53747921 -149337611 - L1MDb LINE L1 -2482 3924 2558 * 186 71 0 0 chr5 53747923 53747951 -149337581 + (TA)n Simple_repeat Simple_repeat 1 28 0 2592 260 95 31 chr5 53747965 53749587 -149335945 - L1MDb LINE L1 -3945 2461 776 30 27 0 0 chr5 53750351 53750388 -149335144 + AT_rich Low_complexity Low_complexity 1 37 0 188 408 15 31 chr5 53750496 53750626 -149334906 - MIR SINE MIR -128 134 7 291 114 0 0 chr5 53751226 53751270 -149334262 + (TC)n Simple_repeat Simple_repeat 1 44 0 25 0 0 0 chr5 53751312 53751337 -149334195 + AT_rich Low_complexity Low_complexity 1 25 0 181 360 0 0 chr5 53751362 53751412 -149334120 - MIR SINE MIR -120 88 39 382 264 80 25 chr5 53751425 53751588 -149333944 + MIR SINE MIR 88 259 -3 1463 119 0 4 chr5 53754069 53754296 -149331236 - pTR5 LTR ERV1 -2041 397 172 281 293 10 0 chr5 53754298 53754397 -149331135 - LTR30 LTR ERV1 -79 643 544 417 86 0 0 chr5 53754401 53754459 -149331073 - pTR5 LTR ERV1 -417 2021 1964 3541 39 0 5 chr5 53754469 53754907 -149330625 - L1PA3 LINE L1 0 6155 5720 19063 35 1 0 chr5 53754909 53757472 -149328060 - L1PA3 LINE L1 -552 5603 3039 16198 57 1 0 chr5 53757472 53759551 -149325981 + L1PA3 LINE L1 963 3043 -3103 3230 168 37 57 chr5 53759551 53760390 -149325142 - pTR5 LTR ERV1 -490 1523 5 922 257 43 27 chr5 53761424 53761905 -149323627 + MER66A LTR ERV1 90 468 -10 388 274 91 43 chr5 53762474 53762682 -149322850 - L1MC4 LINE L1 -120 7922 7705 213 256 107 8 chr5 53763569 53763667 -149321865 + MIR SINE MIR 84 192 -70 182 211 26 0 chr5 53764742 53764780 -149320752 - L2 LINE L2 -17 3296 3258 184 290 53 46 chr5 53764879 53765010 -149320522 - MIR3 SINE MIR -67 141 10 2018 125 0 0 chr5 53765557 53765887 -149319645 + AluSx SINE Alu 1 330 0 493 276 9 0 chr5 53766667 53766772 -149318760 + MER5A DNA MER1_type 4 109 -80 19894 46 3 10 chr5 53766810 53770130 -149315402 - L1PA3 LINE L1 -4 6151 2847 1194 154 5 1 chr5 53770231 53772649 -149312883 + ALR/Alpha Satellite centromeric 1 2427 -26 39944 75 2 5 chr5 53772655 53778822 -149306710 + L1PA3 LINE L1 5 6152 -3 1249 150 6 3 chr5 53778828 53783511 -149302021 + ALR/Alpha Satellite centromeric 1 5958 -1560 6448 81 4 16 chr5 53783511 53784760 -149300772 - L1PA4 LINE L1 -3 6152 4909 1249 150 6 3 chr5 53784760 53786310 -149299222 + ALR/Alpha Satellite centromeric 5958 7502 -16 1891 26 18 0 chr5 53786310 53786539 -149298993 - L1PA3 LINE L1 -1 6154 5922 37856 58 34 2 chr5 53786539 53791467 -149294065 - L1P LINE L1 -1059 5087 3 1129 155 4 2 chr5 53791474 53795735 -149289797 + ALR/Alpha Satellite centromeric 1 4269 -26 37689 70 5 3 chr5 53795738 53800032 -149285500 - L1PA3 LINE L1 -5 6150 1840 2038 119 7 0 chr5 53800032 53800326 -149285206 + AluY SINE Alu 1 296 -15 37689 70 5 3 chr5 53800326 53801822 -149283710 - L1PA3 LINE L1 -4315 1840 348 1271 147 2 1 chr5 53801830 53804093 -149281439 + ALR/Alpha Satellite centromeric 1 2265 -7 1281 148 4 1 chr5 53804106 53806647 -149278885 + ALR/Alpha Satellite centromeric 1 2548 -7 1243 143 3 1 chr5 53806660 53809269 -149276263 + ALR/Alpha Satellite centromeric 1 2614 -26 1196 155 5 2 chr5 53809369 53828009 -149257523 + ALR/Alpha Satellite centromeric 1 18692 -68 23095 77 1 2 chr5 53828023 53831079 -149254453 - L1P LINE L1 -3087 3059 7 1219 163 3 1 chr5 53831091 53846755 -149238777 + ALR/Alpha Satellite centromeric 1 15695 -30 6770 75 3 0 chr5 53846757 53847809 -149237723 - L1PA3 LINE L1 -1 6154 5103 10563 46 1 1 chr5 53847809 53849124 -149236408 + L1P LINE L1 3728 5042 -1104 1231 162 4 3 chr5 53849124 53872792 -149212740 + ALR/Alpha Satellite centromeric 1 23982 -2711 2713 17 0 0 chr5 53872792 53873089 -149212443 - AluYa5 SINE Alu -14 297 1 1231 162 4 3 chr5 53873089 53875803 -149209729 + ALR/Alpha Satellite centromeric 23982 26693 0 1105 159 4 1 chr5 53875903 53878710 -149206822 + ALR/Alpha Satellite centromeric 1 2814 -26 22 0 0 0 chr5 53878710 53878732 -149206800 + AT_rich Low_complexity Low_complexity 1 22 0 325 43 0 0 chr5 53878732 53878778 -149206754 - L1PA3 LINE L1 0 6155 6110 677 34 11 0 chr5 53878778 53878867 -149206665 + L1PA3 LINE L1 5952 6041 -114 1281 155 4 4 chr5 53878867 53883756 -149201776 + ALR/Alpha Satellite centromeric 1 4888 -21 1084 173 5 0 chr5 53883856 53885419 -149200113 + ALR/Alpha Satellite centromeric 1 1570 -4 1267 138 3 1 chr5 53885548 53889172 -149196360 - ALR/Alpha Satellite centromeric 0 3631 1 1211 153 3 1 chr5 53889185 53891171 -149194361 - ALR/Alpha Satellite centromeric 0 1990 1 10570 46 1 1 chr5 53891171 53892486 -149193046 - L1P LINE L1 -1104 5042 3728 6715 77 3 0 chr5 53892486 53892636 -149192896 + L1PA3 LINE L1 5103 6150 -1 6757 76 3 0 chr5 53892636 53893530 -149192002 + L1PA3 LINE L1 5254 6150 -5 1051 178 1 2 chr5 53893531 53895150 -149190382 - ALR/Alpha Satellite centromeric -23 1616 1 41464 63 3 1 chr5 53895185 53901322 -149184210 - L1PA3 LINE L1 0 6155 9 1065 161 2 3 chr5 53901327 53901969 -149183563 - ALR/Alpha Satellite centromeric 0 641 1 2436 84 59 3 chr5 53902657 53903012 -149182520 + L1PA6 LINE L1 5775 6149 -5 207 0 0 0 chr5 53903409 53903432 -149182100 + (TG)n Simple_repeat Simple_repeat 2 24 0 2326 159 20 32 chr5 53903442 53903881 -149181651 + Tigger2a DNA MER2_type 1 434 0 1258 286 88 0 chr5 53904704 53905033 -149180499 - MLT1E2 LTR MaLR -133 493 136 1208 233 95 75 chr5 53905256 53905887 -149179645 + L1ME3 LINE L1 551 1194 -4851 4457 20 7 0 chr5 53905911 53906565 -149178967 - L1PA2 LINE L1 -378 5777 5117 3194 29 5 0 chr5 53906565 53906943 -149178589 + L1PA2 LINE L1 5772 6152 -3 712 210 34 26 chr5 53906945 53907178 -149178354 + L1ME3 LINE L1 1212 1446 -5118 666 220 0 43 chr5 53907187 53907328 -149178204 + FRAM SINE Alu 20 154 -22 586 246 193 17 chr5 53907330 53907393 -149178139 + L1ME3 LINE L1 1481 1532 -5032 183 42 0 0 chr5 53907393 53907417 -149178115 + (CA)n Simple_repeat Simple_repeat 2 25 0 586 246 193 17 chr5 53907417 53907654 -149177878 + L1ME3 LINE L1 1532 1834 -4730 308 211 156 9 chr5 53907698 53907807 -149177725 + L1ME3 LINE L1 1966 2090 -4474 272 238 0 63 chr5 53907966 53908029 -149177503 - MER5A DNA MER1_type 0 189 131 35470 67 32 9 chr5 53908042 53912909 -149172623 + L1P LINE L1 7 4985 -1161 18680 52 1 0 chr5 53913070 53916264 -149169268 + L1PA4 LINE L1 2955 6152 -3 414 226 0 0 chr5 53916267 53916360 -149169172 + L1ME3 LINE L1 4915 5007 -1557 1206 214 46 61 chr5 53916610 53916914 -149168618 + L1ME3 LINE L1 4964 5263 -1301 2043 119 0 11 chr5 53916914 53917226 -149168306 - AluSq SINE Alu 0 311 3 1206 214 46 61 chr5 53917226 53917312 -149168220 + L1ME3 LINE L1 5263 5349 -1215 267 162 59 15 chr5 53917324 53917392 -149168140 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 180 0 0 0 chr5 53917402 53917422 -149168110 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 616 197 0 17 chr5 53917896 53918013 -149167519 - MLT1A1 LTR MaLR -1 653 539 26 0 0 0 chr5 53918239 53918265 -149167267 + AT_rich Low_complexity Low_complexity 1 26 0 607 236 56 0 chr5 53918442 53918603 -149166929 - LTR33A LTR ERVL -37 486 317 1121 212 35 111 chr5 53918604 53918981 -149166551 - MLT1A1 LTR MaLR -17 348 1 3232 188 7 8 chr5 53920023 53920624 -149164908 + L1PA16 LINE L1 5542 6141 -25 36 40 0 0 chr5 53920869 53920919 -149164613 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 53921164 53921196 -149164336 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr5 53921955 53921991 -149163541 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 53922036 53922060 -149163472 + AT_rich Low_complexity Low_complexity 1 24 0 977 233 122 14 chr5 53922172 53922541 -149162991 + L1ME3 LINE L1 5882 6290 -290 368 375 122 0 chr5 53922597 53922842 -149162690 + L1MEc LINE L1 110 384 -6012 307 259 61 46 chr5 53922854 53922985 -149162547 + MER94 DNA DNA 2 134 0 16908 86 3 3 chr5 53923361 53925640 -149159892 - L1P LINE L1 -3859 2287 9 1065 161 2 3 chr5 53925645 53926287 -149159245 - ALR/Alpha Satellite centromeric 0 641 1 9953 50 33 0 chr5 53926834 53928565 -149156967 - L1PA4 LINE L1 -312 5843 4056 * 16414 54 1 0 chr5 53928554 53930669 -149154863 + L1PA4 LINE L1 1927 4044 -2102 1399 200 3 32 chr5 53931853 53932138 -149153394 - AluJo SINE Alu -10 302 26 25 0 0 0 chr5 53932345 53932370 -149153162 + AT_rich Low_complexity Low_complexity 1 25 0 563 223 81 129 chr5 53933178 53933854 -149151678 - HAL1b LINE L1 -20 1328 685 680 156 78 39 chr5 53933945 53934124 -149151408 + MER53 DNA DNA 2 187 -2 409 248 0 41 chr5 53934986 53935131 -149150401 + C-rich Low_complexity Low_complexity 1 139 0 1635 104 16 79 chr5 53935417 53935734 -149149798 - L1P4 LINE L1 -608 5557 5261 2553 151 27 2 chr5 53935734 53936182 -149149350 + L1PA15 LINE L1 5704 6163 -2 26 30 0 0 chr5 53936699 53936732 -149148800 + AT_rich Low_complexity Low_complexity 1 33 0 189 147 0 0 chr5 53937400 53937434 -149148098 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr5 53937723 53937751 -149147781 + AT_rich Low_complexity Low_complexity 1 28 0 23 97 0 0 chr5 53939038 53939110 -149146422 + AT_rich Low_complexity Low_complexity 1 72 0 655 203 155 37 chr5 53939676 53939863 -149145669 + MIR SINE MIR 4 212 -50 10313 147 72 9 chr5 53940342 53942129 -149143403 + Tigger1 DNA MER2_type 20 1919 -499 5803 21 0 0 chr5 53942134 53942806 -149142726 + L1PA4 LINE L1 5306 5977 -178 1871 165 49 0 chr5 53942909 53943237 -149142295 + Tigger1 DNA MER2_type 2075 2418 0 231 257 0 14 chr5 53943237 53943272 -149142260 + LTR66 LTR ERVL 406 439 -171 2035 199 5 0 chr5 53943978 53944389 -149141143 - L1PB4 LINE L1 -2 6154 5742 1654 179 14 10 chr5 53944403 53944694 -149140838 - AluJb SINE Alu -20 292 1 2952 152 45 12 chr5 53944712 53944963 -149140569 - L1MA9 LINE L1 -34 6278 6028 871 251 71 29 chr5 53944963 53945314 -149140218 - L1PB4 LINE L1 -133 6023 5658 378 57 0 0 chr5 53946396 53946449 -149139083 + (CA)n Simple_repeat Simple_repeat 1 53 0 770 270 47 33 chr5 53946641 53946941 -149138591 + MER90 LTR ERV1 3 306 -308 1048 317 29 63 chr5 53947193 53947704 -149137828 + L2 LINE L2 2820 3313 0 40306 60 3 5 chr5 53947754 53952986 -149132546 + L1P LINE L1 1 5220 -926 214 139 93 0 chr5 53953196 53953239 -149132293 + L2 LINE L2 3267 3313 0 467 345 12 6 chr5 53953485 53953650 -149131882 + MIR3 SINE MIR 37 202 -6 201 108 0 0 chr5 53954414 53954451 -149131081 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 0 0 0 chr5 53954592 53954618 -149130914 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr5 53954640 53954667 -149130865 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1354 216 21 79 chr5 53954984 53955363 -149130169 - MLT1A1 LTR MaLR -8 357 1 27 0 0 0 chr5 53955616 53955643 -149129889 + AT_rich Low_complexity Low_complexity 1 27 0 2357 183 34 13 chr5 53955733 53956329 -149129203 + L1MA3 LINE L1 2874 3481 -2665 * 4705 207 62 17 chr5 53956325 53958229 -149127303 + L1MA3 LINE L1 4234 6277 -28 243 274 48 24 chr5 53958136 53958260 -149127272 + L1ME1 LINE L1 6035 6161 -5 * 2205 128 36 25 chr5 53958970 53959330 -149126202 + THE1B LTR MaLR 1 364 0 332 70 0 0 chr5 53959330 53959373 -149126159 + THE1B-int LTR MaLR 1 43 -1537 238 301 98 37 chr5 53959412 53959575 -149125957 - MLT1K LTR MaLR -42 546 374 260 298 102 47 chr5 53960315 53960491 -149125041 + MIR3 SINE MIR 14 196 -47 1165 291 68 6 chr5 53960753 53961079 -149124453 + MER70A LTR ERVL 80 425 -47 972 185 60 15 chr5 53961981 53962020 -149123512 + AluJo SINE Alu 82 118 -194 186 43 0 0 chr5 53962020 53962043 -149123489 + (TAA)n Simple_repeat Simple_repeat 2 24 0 972 185 60 15 chr5 53962043 53962203 -149123329 + AluJo SINE Alu 118 290 -22 253 285 83 72 chr5 53962666 53963052 -149122480 + L1MC4a LINE L1 5615 6004 -1804 895 272 23 5 chr5 53963657 53963874 -149121658 - MER58A DNA MER1_type -3 221 1 289 287 28 46 chr5 53963976 53964115 -149121417 - LTR16A LTR ERVL -309 141 3 777 216 72 36 chr5 53964134 53964384 -149121148 - L1MC4a LINE L1 -1317 6491 6233 7242 51 3 26 chr5 53964385 53965518 -149120014 - L1PA5 LINE L1 0 6154 5031 6617 57 3 1 chr5 53965739 53966596 -149118936 - L1PA5 LINE L1 -1101 5045 4187 1197 237 61 65 chr5 53966606 53967210 -149118322 - L1MC4a LINE L1 -1589 6219 5618 351 354 12 21 chr5 53967207 53967546 -149117986 - L1M4 LINE L1 -2284 3862 3527 * 1419 193 77 4 chr5 53968014 53968384 -149117148 + AluSx SINE Alu 1 390 0 882 139 23 8 chr5 53968388 53968721 -149116811 + GA-rich Low_complexity Low_complexity 1 337 0 1727 160 33 13 chr5 53968722 53969029 -149116503 - MER7A DNA MER2_type -35 311 1 1388 226 58 39 chr5 53969106 53969314 -149116218 - L1MD2 LINE L1 -10 6349 6146 2412 229 11 44 chr5 53969314 53969887 -149115645 + MLT2B3 LTR ERVL 1 554 0 273 29 0 0 chr5 53969887 53969921 -149115611 + (TG)n Simple_repeat Simple_repeat 2 35 0 1388 226 58 39 chr5 53969921 53970092 -149115440 - L1MD2 LINE L1 -212 6147 5962 2170 236 67 46 chr5 53970094 53971465 -149114067 - L1MD2 LINE L1 -743 5403 4132 2715 169 40 15 chr5 53971511 53972055 -149113477 + MER74A LTR ERVL 1 558 0 419 292 125 13 chr5 53972217 53972673 -149112859 - L1MD2 LINE L1 -3510 2636 2130 237 272 92 73 chr5 53973168 53973712 -149111820 - HAL1b LINE L1 -779 569 16 988 159 58 88 chr5 53974172 53974398 -149111134 - AluJo SINE Alu -14 298 80 2766 88 3 3 chr5 53974945 53975320 -149110212 + THE1C LTR MaLR 1 375 0 257 128 21 0 chr5 53977079 53977126 -149108406 + CT-rich Low_complexity Low_complexity 1 48 0 232 147 21 11 chr5 53977256 53977345 -149108187 + CT-rich Low_complexity Low_complexity 1 89 0 488 309 40 0 chr5 53977794 53977943 -149107589 + L2 LINE L2 2608 2762 -552 759 311 52 26 chr5 53978021 53978365 -149107167 + MLT1J LTR MaLR 95 447 -64 396 125 0 0 chr5 53978370 53978434 -149107098 + (GA)n Simple_repeat Simple_repeat 1 64 0 336 19 57 0 chr5 53978434 53978487 -149107045 + (TA)n Simple_repeat Simple_repeat 2 57 0 339 299 0 0 chr5 53978530 53978617 -149106915 - MLT1J LTR MaLR -330 181 95 591 257 42 0 chr5 53978700 53978844 -149106688 - L2 LINE L2 -557 2757 2608 202 233 0 0 chr5 53979092 53979135 -149106397 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 734 311 152 17 chr5 53979167 53979645 -149105887 + L2 LINE L2 2762 3297 -16 283 315 74 0 chr5 53980813 53980921 -149104611 + L2 LINE L2 3189 3304 -9 216 0 0 0 chr5 53981056 53981080 -149104452 + (A)n Simple_repeat Simple_repeat 1 24 0 246 62 0 0 chr5 53981403 53981435 -149104097 + (T)n Simple_repeat Simple_repeat 1 32 0 1561 128 0 0 chr5 53981449 53981667 -149103865 - AluSx SINE Alu -94 218 1 1444 290 45 44 chr5 53982507 53983648 -149101884 + L1M4 LINE L1 1 1149 -4752 18681 81 9 0 chr5 53983652 53986123 -149099409 + L1P LINE L1 2 2495 -3651 5637 112 113 91 chr5 53986125 53987620 -149097912 + pTR5 LTR ERV1 743 2438 0 32511 92 3 11 chr5 53987623 53992606 -149092926 + HERV9 LTR ERV1 1 4944 -3455 665 130 235 12 chr5 53992607 53992854 -149092678 + HERV9 LTR ERV1 840 1141 -5755 356 161 0 0 chr5 53992852 53992914 -149092618 + HERV9 LTR ERV1 7503 7564 -835 * 6277 106 71 56 chr5 53992910 53994860 -149090672 + pTR5 LTR ERV1 66 8399 0 24696 42 2 1 chr5 53994864 53998515 -149087017 + L1PA4 LINE L1 2501 6151 -4 434 202 0 19 chr5 53998515 53998619 -149086913 + L1M4 LINE L1 2742 2843 -3127 * 1032 212 50 17 chr5 53998612 53998853 -149086679 + L1P LINE L1 3698 3946 -2200 690 304 14 0 chr5 53998889 53999106 -149086426 + L1MB1 LINE L1 2418 2637 -3333 555 208 35 0 chr5 53999110 53999254 -149086278 + L1MB1 LINE L1 4284 4432 -1538 3597 166 91 10 chr5 53999275 53999875 -149085657 + L1MB1 LINE L1 4598 5148 -844 2006 160 7 0 chr5 53999875 54000181 -149085351 + AluJo SINE Alu 3 310 -2 3597 166 91 10 chr5 54000181 54000773 -149084759 + L1MB1 LINE L1 5148 5879 -113 1061 203 5 0 chr5 54001029 54001231 -149084301 + AluJb SINE Alu 110 312 0 732 121 0 16 chr5 54001239 54001375 -149084157 + L1MB1 LINE L1 5884 5992 0 3558 206 59 65 chr5 54002362 54003055 -149082477 - L1MD2 LINE L1 -1 6241 5545 2143 123 3 16 chr5 54003055 54003371 -149082161 + AluSx SINE Alu 1 312 0 3558 206 59 65 chr5 54003371 54003887 -149081645 - L1MD2 LINE L1 -697 5545 5027 336 140 60 90 chr5 54003905 54004005 -149081527 - L1MB2 LINE L1 -1 6170 6074 * 32201 103 24 20 chr5 54004001 54009752 -149075780 + L1P2 LINE L1 165 6009 -460 225 211 0 0 chr5 54009963 54010015 -149075517 + (CA)n Simple_repeat Simple_repeat 1 52 0 536 127 0 13 chr5 54010731 54010810 -149074722 - AluJb SINE Alu -39 273 196 227 192 101 91 chr5 54010851 54010950 -149074582 - MIR SINE MIR -155 107 8 496 141 14 0 chr5 54011461 54011549 -149073983 + L1MC4 LINE L1 6868 7032 -851 540 303 17 29 chr5 54012138 54012313 -149073219 + MER5B DNA MER1_type 3 175 -3 267 253 24 12 chr5 54012518 54012601 -149072931 + MLT1G1 LTR MaLR 100 183 -412 1936 112 6 70 chr5 54012605 54012917 -149072615 + AluSg SINE Alu 1 292 -18 266 276 32 57 chr5 54012959 54013082 -149072450 + MLT1G1 LTR MaLR 173 292 -298 1625 227 72 8 chr5 54013082 54013483 -149072049 - MER95 LTR ERV -4 427 1 3540 197 20 30 chr5 54013510 54013956 -149071576 - L1 LINE L1 -955 6610 6161 3012 110 52 9 chr5 54013956 54014403 -149071129 - L1PA11 LINE L1 0 6174 5709 3540 197 20 30 chr5 54014403 54015528 -149070004 - L1 LINE L1 -1404 6161 3083 1372 112 41 0 chr5 54015528 54015724 -149069808 - LTR12 LTR ERV1 -134 580 377 328 299 17 0 chr5 54015725 54015842 -149069690 - LTR30 LTR ERV1 -80 642 524 873 132 132 0 chr5 54015842 54016008 -149069524 - LTR12 LTR ERV1 -432 2006 2 4316 120 8 0 chr5 54016009 54016627 -149068905 - HERV9 LTR ERV1 0 8399 7777 713 44 0 0 chr5 54016626 54016717 -149068815 + Harlequin LTR ERV1 1630 1720 -5176 * 2017 112 0 38 chr5 54016736 54017050 -149068482 - HERV17 LTR ERV1 -7059 1567 1266 1857 126 30 21 chr5 54017064 54017674 -149067858 - HERV17 LTR ERV1 -3414 4985 703 * 12283 97 9 7 chr5 54017673 54019366 -149066166 - HERV17 LTR ERV1 -5427 2972 1276 1497 91 359 165 chr5 54019369 54019878 -149065654 - LTR12 LTR ERV1 -130 584 1 612 284 60 5 chr5 54019879 54020097 -149065435 - L1 LINE L1 -4479 3086 2857 2476 126 51 0 chr5 54020098 54020472 -149065060 - L1PA14 LINE L1 0 6161 5769 41444 51 23 3 chr5 54020475 54026498 -149059034 - L1PA3 LINE L1 0 6155 8 2294 69 6 38 chr5 54027773 54028091 -149057441 - AluY SINE Alu 0 311 4 2298 116 3 0 chr5 54028307 54028617 -149056915 + AluSx SINE Alu 1 311 -1 307 352 20 15 chr5 54029829 54030028 -149055504 - MER89-int LTR ERV1 -5429 1372 1173 1549 247 56 2 chr5 54030880 54031289 -149054243 - MER95 LTR ERV 0 431 1 1089 234 9 0 chr5 54031363 54031590 -149053942 + MLT1H1 LTR MaLR 327 555 0 21 36 0 0 chr5 54031997 54032025 -149053507 + AT_rich Low_complexity Low_complexity 1 28 0 370 199 24 145 chr5 54032164 54032330 -149053202 + MLT1E1 LTR MaLR 6 151 -503 4421 135 15 126 chr5 54032330 54033868 -149051664 + pTR5 LTR ERV1 753 2606 0 1519 249 43 0 chr5 54033896 54034246 -149051286 + MLT1E1 LTR MaLR 288 652 -2 296 264 142 28 chr5 54034314 54034420 -149051112 + MLT1J LTR MaLR 347 541 -74 16073 59 34 5 chr5 54035011 54037242 -149048290 - L1P LINE L1 -2226 3920 1624 25361 78 12 3 chr5 54037398 54041594 -149043938 + L1PA7 LINE L1 1917 6149 -5 396 161 103 0 chr5 54042941 54043028 -149042504 - MER94 DNA DNA -37 97 2 216 97 0 0 chr5 54043050 54043081 -149042451 + (A)n Simple_repeat Simple_repeat 1 31 0 762 298 28 16 chr5 54043287 54043539 -149041993 + MIR SINE MIR 8 262 0 1577 171 18 11 chr5 54044139 54044413 -149041119 - AluJo SINE Alu -30 282 7 22 35 0 0 chr5 54044758 54044787 -149040745 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 54046167 54046197 -149039335 + AT_rich Low_complexity Low_complexity 1 30 0 273 329 167 13 chr5 54049399 54049627 -149035905 + L3 LINE CR1 1179 1441 -136 183 176 0 0 chr5 54049622 54049656 -149035876 + MIR3 SINE MIR 172 205 -3 * 358 328 40 34 chr5 54050215 54050392 -149035140 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr5 54050393 54050416 -149035116 + AT_rich Low_complexity Low_complexity 1 23 0 462 332 137 9 chr5 54050427 54050638 -149034894 - MIR SINE MIR -15 247 10 22 0 0 0 chr5 54051204 54051226 -149034306 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr5 54051350 54051373 -149034159 + (A)n Simple_repeat Simple_repeat 1 23 0 25 31 0 0 chr5 54052601 54052633 -149032899 + AT_rich Low_complexity Low_complexity 1 32 0 244 327 37 28 chr5 54052799 54052906 -149032626 - MER5A DNA MER1_type -75 114 7 181 219 62 52 chr5 54053188 54053284 -149032248 + L3b LINE CR1 1270 1366 -217 255 217 0 0 chr5 54058029 54058089 -149027443 + GA-rich Low_complexity Low_complexity 1 60 0 257 353 0 33 chr5 54058104 54058226 -149027306 + GA-rich Low_complexity Low_complexity 1 118 0 23 33 0 0 chr5 54059254 54059284 -149026248 + AT_rich Low_complexity Low_complexity 1 30 0 282 154 0 0 chr5 54060524 54060576 -149024956 - L1MB1 LINE L1 -2 6166 6115 458 17 17 0 chr5 54060701 54060760 -149024772 + (CA)n Simple_repeat Simple_repeat 2 61 0 359 273 116 20 chr5 54061006 54061204 -149024328 + LTR48 LTR ERV1 522 738 -49 219 167 0 0 chr5 54061520 54061562 -149023970 + (CA)n Simple_repeat Simple_repeat 2 43 0 1280 260 15 31 chr5 54061580 54062034 -149023498 + L1MC5 LINE L1 6999 7445 -516 2035 102 68 7 chr5 54062047 54062340 -149023192 - AluSq SINE Alu -2 311 1 1249 230 6 25 chr5 54062718 54063035 -149022497 + AluJo SINE Alu 1 311 -1 255 345 125 26 chr5 54063319 54063583 -149021949 + L2 LINE L2 2082 2371 -943 193 147 29 0 chr5 54063862 54063896 -149021636 + MIR SINE MIR 120 154 -108 509 275 100 30 chr5 54064026 54064226 -149021306 - MIR SINE MIR -45 217 4 2109 178 48 11 chr5 54065197 54065630 -149019902 + MER66A LTR ERV1 27 475 -3 190 233 0 0 chr5 54067054 54067097 -149018435 - L2 LINE L2 0 3313 3271 309 51 0 0 chr5 54068011 54068050 -149017482 + (CA)n Simple_repeat Simple_repeat 2 40 0 3507 74 17 11 chr5 54068195 54068670 -149016862 + L1PA10 LINE L1 5680 6157 -11 274 262 101 118 chr5 54068954 54069191 -149016341 + L2 LINE L2 3013 3245 -68 7222 23 2 0 chr5 54069693 54070533 -149014999 + L1PA4 LINE L1 5312 6153 -2 478 265 64 64 chr5 54070676 54070895 -149014637 - MER112 DNA MER1_type -12 248 30 23 33 0 0 chr5 54071273 54071303 -149014229 + AT_rich Low_complexity Low_complexity 1 30 0 421 359 53 6 chr5 54071345 54071665 -149013867 + L1MC4a LINE L1 5563 5897 -1911 709 271 117 107 chr5 54071864 54072771 -149012761 - L1MEd LINE L1 -5193 926 11 808 253 32 5 chr5 54073141 54073327 -149012205 + MER20 DNA MER1_type 7 197 -22 1737 105 0 0 chr5 54074215 54074443 -149011089 - AluSq SINE Alu -65 248 21 661 259 26 26 chr5 54074646 54074839 -149010693 + MIR SINE MIR 8 200 -62 23 0 0 0 chr5 54074882 54074905 -149010627 + AT_rich Low_complexity Low_complexity 1 23 0 1749 197 34 51 chr5 54075301 54075769 -149009763 + MER65C LTR ERV1 2 461 0 302 0 26 0 chr5 54075969 54076007 -149009525 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1303 139 0 0 chr5 54076008 54076195 -149009337 - AluSg/x SINE Alu -32 280 94 2227 100 0 7 chr5 54077364 54077673 -149007859 - AluSc SINE Alu -2 307 1 573 87 0 22 chr5 54078089 54078181 -149007351 + L1PA8 LINE L1 6083 6172 0 288 53 0 0 chr5 54078302 54078340 -149007192 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 362 139 14 0 chr5 54078408 54078480 -149007052 + CT-rich Low_complexity Low_complexity 2 74 0 258 81 0 0 chr5 54078482 54078519 -149007013 + (CA)n Simple_repeat Simple_repeat 1 37 0 193 297 0 68 chr5 54079941 54080015 -149005517 + MIR3 SINE MIR 11 79 -129 231 125 0 0 chr5 54081207 54081247 -149004285 + (A)n Simple_repeat Simple_repeat 1 40 0 2242 107 0 3 chr5 54081273 54081572 -149003960 + AluSg SINE Alu 1 298 -12 562 218 27 0 chr5 54082054 54082164 -149003368 + MER20 DNA MER1_type 1 113 -106 1747 199 35 42 chr5 54082196 54082648 -149002884 - MLT1C LTR MaLR -13 454 6 518 188 69 0 chr5 54082656 54082757 -149002775 + MER20 DNA MER1_type 112 219 0 1286 220 105 15 chr5 54083658 54084592 -149000940 - L1MC4 LINE L1 -139 7903 6735 487 277 58 25 chr5 54084658 54084900 -149000632 - L1MC4 LINE L1 -1333 6709 6460 1905 160 0 0 chr5 54085462 54085749 -148999783 + AluJb SINE Alu 1 287 -25 207 100 0 0 chr5 54085752 54085782 -148999750 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 651 162 14 9 chr5 54085782 54086094 -148999438 - L1MC4 LINE L1 -469 7339 6870 226 192 101 91 chr5 54086608 54086707 -148998825 + MIR SINE MIR 8 107 -155 499 133 0 0 chr5 54086752 54086827 -148998705 + AluJb SINE Alu 199 273 -39 207 220 0 0 chr5 54087543 54087593 -148997939 + (TG)n Simple_repeat Simple_repeat 1 50 0 2417 77 3 0 chr5 54089513 54089823 -148995709 - AluSp SINE Alu -2 311 1 225 94 0 0 chr5 54089948 54089980 -148995552 + (TG)n Simple_repeat Simple_repeat 1 32 0 1381 186 10 53 chr5 54090465 54090766 -148994766 + AluJo SINE Alu 18 305 -7 545 303 17 29 chr5 54090883 54091058 -148994474 - MER5B DNA MER1_type -3 175 3 511 133 0 0 chr5 54091721 54091796 -148993736 - AluJb SINE Alu -39 273 199 186 209 99 99 chr5 54091845 54091936 -148993596 - MIR SINE MIR -164 98 8 644 163 16 0 chr5 54092453 54092591 -148992941 + L1MC4 LINE L1 6868 7073 -795 524 226 30 0 chr5 54092590 54092723 -148992809 + L1MC4a LINE L1 7159 7295 -513 * 207 100 0 0 chr5 54092765 54092795 -148992737 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 1921 160 0 0 chr5 54092798 54093085 -148992447 - AluJb SINE Alu -25 287 1 436 252 58 0 chr5 54093648 54093787 -148991745 + L1MC4 LINE L1 6460 6606 -1436 195 150 0 80 chr5 54093842 54093942 -148991590 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 1825 162 20 6 chr5 54093956 54094307 -148991225 + L1MC4 LINE L1 6735 7090 -952 1145 253 160 17 chr5 54094308 54094889 -148990643 + L1MC4 LINE L1 7240 7903 -139 486 188 69 0 chr5 54095791 54095892 -148989640 - MER20 DNA MER1_type 0 219 112 1605 208 31 38 chr5 54095900 54096352 -148989180 + MLT1C LTR MaLR 6 454 -13 523 218 27 0 chr5 54096384 54096494 -148989038 - MER20 DNA MER1_type -106 113 1 2260 107 0 3 chr5 54096978 54097277 -148988255 - AluSg SINE Alu -12 298 1 240 122 0 0 chr5 54097303 54097344 -148988188 + (T)n Simple_repeat Simple_repeat 1 41 0 1537 208 6 10 chr5 54098471 54098784 -148986748 + AluJo SINE Alu 1 312 0 1634 105 0 0 chr5 54149773 54149983 -148935549 + AluSc SINE Alu 3 212 -97 246 81 0 0 chr5 54149984 54150021 -148935511 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 2106 139 0 0 chr5 54151169 54151464 -148934068 + AluSx SINE Alu 1 295 -17 2456 122 5 22 chr5 54151489 54151859 -148933673 + THE1B LTR MaLR 1 364 0 10556 104 3 63 chr5 54151865 54153543 -148931989 + THE1B-int LTR MaLR 4 1580 0 2228 138 11 6 chr5 54153543 54153905 -148931627 + THE1B LTR MaLR 1 364 0 254 316 95 44 chr5 54154296 54154454 -148931078 + MIR SINE MIR 10 175 -87 268 302 180 16 chr5 54155006 54155195 -148930337 + HAL1 LINE L1 306 525 -1982 761 229 7 0 chr5 54155195 54155339 -148930193 - MER45A DNA AcHobo 0 178 34 2037 272 142 15 chr5 54155444 54156496 -148929036 + HAL1 LINE L1 626 1810 -697 559 249 105 71 chr5 54156616 54157054 -148928478 + HAL1 LINE L1 1715 2167 -340 494 286 92 66 chr5 54157099 54157403 -148928129 + L1ME LINE L1 3807 4118 -2028 409 284 91 48 chr5 54157425 54157633 -148927899 + LTR67 LTR ERVL 9 225 -332 341 343 22 0 chr5 54157922 54158059 -148927473 + L1ME LINE L1 4177 4316 -1830 453 270 98 23 chr5 54158183 54158490 -148927042 + L1ME LINE L1 4490 4819 -1327 1987 156 3 0 chr5 54158776 54159078 -148926454 + AluSx SINE Alu 1 303 -9 4722 228 13 16 chr5 54159891 54160926 -148924606 - MER45B DNA AcHobo -2 1038 8 191 114 29 0 chr5 54161364 54161399 -148924133 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 27 29 0 0 chr5 54161581 54161615 -148923917 + AT_rich Low_complexity Low_complexity 1 34 0 43050 48 2 1 chr5 54161615 54167754 -148917778 - L1PA3 LINE L1 -5 6150 4 688 132 0 53 chr5 54168650 54168764 -148916768 - AluSq/x SINE Alu -204 108 1 259 258 108 43 chr5 54168774 54168909 -148916623 + L1ME LINE L1 5525 5677 -444 2073 146 30 28 chr5 54168909 54169272 -148916260 - THE1B LTR MaLR 0 364 1 259 258 108 43 chr5 54169272 54169322 -148916210 + L1ME LINE L1 5677 5722 -399 515 324 82 14 chr5 54169322 54169541 -148915991 + MIR SINE MIR 18 251 -11 25 20 0 59 chr5 54169850 54169901 -148915631 + AT_rich Low_complexity Low_complexity 1 48 0 383 308 39 0 chr5 54170568 54170672 -148914860 - L2 LINE L2 -2 3311 3204 319 303 32 112 chr5 54170734 54170922 -148914610 - MIR SINE MIR -72 190 18 440 227 25 8 chr5 54171726 54171845 -148913687 - MLT2F LTR ERVL 0 663 543 486 270 94 117 chr5 54171940 54172377 -148913155 - MLT1J LTR MaLR -6 505 79 384 22 0 0 chr5 54172377 54172422 -148913110 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2395 86 0 0 chr5 54172489 54172803 -148912729 + L1PA4 LINE L1 1 314 -5832 * 36890 52 6 2 chr5 54172802 54178356 -148907176 + L1PA4 LINE L1 585 6155 0 230 243 71 50 chr5 54178359 54178499 -148907033 - Charlie7 DNA MER1_type -2469 143 1 204 239 0 0 chr5 54178806 54178852 -148906680 + (CATA)n Simple_repeat Simple_repeat 2 47 0 270 313 0 0 chr5 54180869 54180936 -148904596 + polypyrimidine Low_complexity Low_complexity 2 68 0 1860 161 10 0 chr5 54181149 54181447 -148904085 - AluJb SINE Alu -11 301 1 2253 182 57 40 chr5 54181704 54182247 -148903285 - MLT2B3 LTR ERVL 0 554 3 206 298 0 0 chr5 54182300 54182347 -148903185 - L2 LINE L2 -7 3265 3219 234 184 0 0 chr5 54182464 54182502 -148903030 - MER2 DNA MER2_type -307 38 1 562 180 98 16 chr5 54182519 54182641 -148902891 + MLT2F LTR ERVL 7 138 -525 5226 202 16 12 chr5 54182668 54183860 -148901672 + L1 LINE L1 2966 4162 -1984 4989 169 10 8 chr5 54183887 54184971 -148900561 + L1PA16 LINE L1 5080 6166 0 1432 170 11 19 chr5 54184982 54185247 -148900285 + MER2 DNA MER2_type 83 345 0 217 322 172 0 chr5 54185304 54185391 -148900141 + L3 LINE CR1 1027 1128 -449 215 306 122 10 chr5 54185439 54185537 -148899995 + L3 LINE CR1 1250 1358 -219 25 0 0 0 chr5 54186025 54186050 -148899482 + AT_rich Low_complexity Low_complexity 1 25 0 913 9 0 9 chr5 54186446 54186555 -148898977 - L1PA2 LINE L1 -2 6153 6046 4325 173 55 7 chr5 54186889 54187223 -148898309 + MER6 DNA MER2_type 1 318 -547 273 57 0 0 chr5 54187223 54187258 -148898274 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 4325 173 55 7 chr5 54187258 54187749 -148897783 + MER6 DNA MER2_type 318 865 0 459 174 0 0 chr5 54188009 54188095 -148897437 + CT-rich Low_complexity Low_complexity 3 88 0 262 242 87 41 chr5 54188336 54188410 -148897122 - L1M4 LINE L1 -1305 4841 4772 186 43 0 0 chr5 54188410 54188433 -148897099 + (TTA)n Simple_repeat Simple_repeat 3 25 0 262 242 87 41 chr5 54188433 54188483 -148897049 - L1M4 LINE L1 -1374 4772 4726 2409 100 7 0 chr5 54188483 54188793 -148896739 - AluSx SINE Alu 0 312 1 262 242 87 41 chr5 54188793 54188886 -148896646 - L1M4 LINE L1 -1420 4726 4613 597 207 61 96 chr5 54189643 54189750 -148895782 + MIR SINE MIR 72 170 -92 192 40 0 0 chr5 54189750 54189775 -148895757 + (TG)n Simple_repeat Simple_repeat 2 26 0 597 207 61 96 chr5 54189775 54189865 -148895667 + MIR SINE MIR 170 262 0 362 321 82 86 chr5 54191775 54192239 -148893293 - L2 LINE L2 0 3272 2811 1104 69 0 0 chr5 54192278 54192409 -148893123 - AluSp SINE Alu -182 131 1 20605 165 31 14 chr5 54192414 54195906 -148889626 - L1 LINE L1 -817 6748 3117 2117 92 48 0 chr5 54195906 54196199 -148889333 - AluSp SINE Alu -6 307 1 20605 165 31 14 chr5 54196199 54199364 -148886168 - L1 LINE L1 -4448 3117 6 201 147 0 0 chr5 54200304 54200338 -148885194 + (A)n Simple_repeat Simple_repeat 1 34 0 685 149 8 8 chr5 54200482 54200616 -148884916 + GA-rich Low_complexity Low_complexity 3 136 0 814 291 18 9 chr5 54201384 54201607 -148883925 - MIR SINE MIR -26 236 12 22 0 0 0 chr5 54202605 54202627 -148882905 + AT_rich Low_complexity Low_complexity 1 22 0 587 293 77 50 chr5 54202841 54203203 -148882329 + L1MEd LINE L1 73 444 -5675 2192 102 14 0 chr5 54203513 54203808 -148881724 + AluSc SINE Alu 1 299 -10 332 189 151 57 chr5 54204538 54204644 -148880888 + MER63 DNA MER1_type 2 743 -319 247 271 12 47 chr5 54204653 54204738 -148880794 + MER63 DNA MER1_type 977 1058 -2 22 35 0 0 chr5 54204996 54205025 -148880507 + AT_rich Low_complexity Low_complexity 1 29 0 221 308 90 0 chr5 54205025 54205103 -148880429 - L2 LINE L2 0 3313 3229 459 301 64 2 chr5 54205405 54205592 -148879940 + L1ME3A LINE L1 5704 5904 -258 1423 161 33 33 chr5 54205897 54206170 -148879362 - AluJo SINE Alu -25 287 15 1555 179 0 59 chr5 54207647 54207971 -148877561 + AluJo SINE Alu 1 305 -7 4407 42 0 61 chr5 54208061 54208686 -148876846 - L1PA4 LINE L1 -3159 2987 2401 19303 38 1 1 chr5 54208686 54211863 -148873669 + L1PA4 LINE L1 2986 6165 0 415 86 0 0 chr5 54212701 54212759 -148872773 - LTR47A LTR ERVL -53 399 342 3797 147 88 19 chr5 54212763 54213435 -148872097 + MER72 LTR ERV1 5 722 0 689 192 34 85 chr5 54213462 54213639 -148871893 - LTR47A LTR ERVL -112 340 173 292 150 67 0 chr5 54213629 54213689 -148871843 - LTR47A LTR ERVL -388 64 1 * 21 0 0 0 chr5 54214123 54214144 -148871388 + AT_rich Low_complexity Low_complexity 1 21 0 474 184 11 95 chr5 54214398 54214416 -148871116 - L1MA10 LINE L1 0 6334 6317 2757 188 67 83 chr5 54214416 54215293 -148870239 - L1ME2 LINE L1 -9 6155 5293 931 314 72 20 chr5 54215404 54215859 -148869673 + L2 LINE L2 2835 3313 0 230 280 27 13 chr5 54216285 54216360 -148869172 - Charlie8 DNA MER1_type -2197 220 145 201 333 139 11 chr5 54216382 54216562 -148868970 + MIR SINE MIR 58 260 -2 291 143 0 39 chr5 54216759 54216836 -148868696 + (GGAA)n Simple_repeat Simple_repeat 2 75 0 1210 33 6 28 chr5 54216836 54217016 -148868516 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 496 163 30 22 chr5 54217136 54217271 -148868261 + GA-rich Low_complexity Low_complexity 1 136 0 26 30 0 0 chr5 54217343 54217376 -148868156 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr5 54217670 54217692 -148867840 + AT_rich Low_complexity Low_complexity 1 22 0 42212 54 2 5 chr5 54217942 54224051 -148861481 + L1PA4 LINE L1 3 6096 -59 509 71 0 0 chr5 54224151 54224221 -148861311 + L1PA3 LINE L1 6081 6150 -5 266 287 155 16 chr5 54224513 54224642 -148860890 + MIR3 SINE MIR 55 201 -7 457 287 134 12 chr5 54225365 54225529 -148860003 + LTR16C LTR ERVL 70 253 -238 366 208 0 79 chr5 54225622 54225723 -148859809 + LTR16C LTR ERVL 385 477 -14 621 158 59 0 chr5 54225745 54225846 -148859686 - FLAM_A SINE Alu -16 126 20 1147 314 88 41 chr5 54225854 54226897 -148858635 - L1M4 LINE L1 -2683 3463 2372 842 211 0 0 chr5 54228288 54228435 -148857097 - AluJb SINE Alu -31 281 135 252 0 0 0 chr5 54229101 54229129 -148856403 + (A)n Simple_repeat Simple_repeat 1 28 0 183 360 45 11 chr5 54229372 54229461 -148856071 + L2 LINE L2 2666 2757 -557 1339 204 4 0 chr5 54229462 54229702 -148855830 - AluJb SINE Alu -70 242 2 567 342 54 61 chr5 54229757 54230181 -148855351 + L2 LINE L2 2852 3272 0 942 305 64 27 chr5 54230441 54230880 -148854652 - LTR16C LTR ERVL 0 491 37 28 0 0 0 chr5 54231040 54231068 -148854464 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr5 54231328 54231355 -148854177 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 27 49 0 0 chr5 54231586 54231627 -148853905 + AT_rich Low_complexity Low_complexity 1 41 0 514 344 117 44 chr5 54231920 54232446 -148853086 + L2 LINE L2 1381 1867 -1447 2125 111 27 3 chr5 54232446 54232743 -148852789 - AluSg SINE Alu -6 304 1 514 344 117 44 chr5 54232743 54233343 -148852189 + L2 LINE L2 1867 2589 -725 437 151 14 0 chr5 54233351 54233424 -148852108 - MADE1 DNA Mariner -6 74 1 325 344 97 49 chr5 54233514 54234063 -148851469 + L2 LINE L2 2694 3272 0 22 70 0 0 chr5 54235603 54235646 -148849886 + AT_rich Low_complexity Low_complexity 1 43 0 250 292 52 26 chr5 54236199 54236217 -148849315 - L1MA10 LINE L1 -2 6332 6315 2244 216 61 36 chr5 54236217 54236852 -148848680 - L1ME2 LINE L1 -9 6155 5505 248 258 124 0 chr5 54237440 54237537 -148847995 - L1ME LINE L1 -437 5684 5576 695 229 17 6 chr5 54237804 54237983 -148847549 + L1MB7 LINE L1 6004 6184 0 287 290 38 70 chr5 54238146 54238332 -148847200 - MIR SINE MIR -4 258 79 1399 220 7 7 chr5 54238685 54238994 -148846538 + AluJo SINE Alu 1 309 0 241 233 107 19 chr5 54240026 54240129 -148845403 - L2 LINE L2 -2 3311 3200 283 203 16 53 chr5 54240276 54240463 -148845069 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1719 154 99 15 chr5 54240556 54240888 -148844644 - MER46B DNA MER2_type 0 236 2 1650 229 11 27 chr5 54241161 54241533 -148843999 - MLT1A2 LTR MaLR -5 369 4 21 0 0 0 chr5 54241548 54241569 -148843963 + AT_rich Low_complexity Low_complexity 1 21 0 1244 220 151 20 chr5 54241577 54241927 -148843605 + MSTD LTR MaLR 1 396 0 23 54 0 0 chr5 54242355 54242392 -148843140 + AT_rich Low_complexity Low_complexity 1 37 0 550 237 178 7 chr5 54242511 54242663 -148842869 - MER5A DNA MER1_type -6 183 6 206 206 16 63 chr5 54242727 54242790 -148842742 + MIR SINE MIR 148 207 -55 224 337 71 0 chr5 54243048 54243146 -148842386 - L2 LINE L2 -657 2657 2553 260 299 94 26 chr5 54243214 54243331 -148842201 + MER5B DNA MER1_type 17 141 -37 189 241 24 60 chr5 54243687 54243770 -148841762 - MIR3 SINE MIR -127 81 2 15358 157 24 15 chr5 54244136 54249297 -148836235 + L1MA2 LINE L1 2507 7723 0 401 245 123 9 chr5 54249571 54249677 -148835855 + MER5B DNA MER1_type 20 137 -41 2724 10 0 0 chr5 54250202 54250505 -148835027 + AluYa8 SINE Alu 1 303 -7 209 203 14 81 chr5 54250676 54250750 -148834782 + MIR SINE MIR 112 180 -82 306 0 0 0 chr5 54252087 54252121 -148833411 + (TG)n Simple_repeat Simple_repeat 1 34 0 1854 161 0 0 chr5 54252121 54252400 -148833132 - AluSx SINE Alu -33 279 1 633 221 52 0 chr5 54253779 54253933 -148831599 + LTR65 LTR ERV1 5 166 -503 262 270 50 20 chr5 54254147 54254247 -148831285 + MER90 LTR ERV1 512 614 0 306 0 0 0 chr5 54254503 54254537 -148830995 + (CA)n Simple_repeat Simple_repeat 1 34 0 6313 135 91 12 chr5 54254548 54254992 -148830540 - HSMAR2 DNA Mariner -1 1301 893 2794 198 11 9 chr5 54254992 54255532 -148830000 + MER87 LTR ERV1 1 541 0 6313 135 91 12 chr5 54255532 54256167 -148829365 - HSMAR2 DNA Mariner -409 893 137 337 316 53 0 chr5 54256319 54256525 -148829007 - L1M4 LINE L1 -2098 4048 3832 * 6462 80 9 2 chr5 54256514 54257402 -148828130 - L1PB1 LINE L1 -1 6150 5257 897 99 23 0 chr5 54257408 54257539 -148827993 - HSMAR2 DNA Mariner -1129 173 40 495 161 0 0 chr5 54257724 54257811 -148827721 + L1MA8 LINE L1 6177 6263 -28 227 167 0 0 chr5 54257812 54257848 -148827684 + Alu SINE Alu 3 38 -262 725 212 22 0 chr5 54257856 54257993 -148827539 + AluJb SINE Alu 141 280 -32 441 0 0 0 chr5 54257993 54258042 -148827490 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 26 0 0 0 chr5 54258057 54258083 -148827449 + AT_rich Low_complexity Low_complexity 1 26 0 6284 93 7 2 chr5 54258475 54259790 -148825742 + L1PA10 LINE L1 4826 6150 -18 40 49 0 0 chr5 54259833 54259894 -148825638 + AT_rich Low_complexity Low_complexity 1 61 0 31 68 0 0 chr5 54259985 54260044 -148825488 + AT_rich Low_complexity Low_complexity 1 59 0 28 29 0 0 chr5 54260118 54260153 -148825379 + AT_rich Low_complexity Low_complexity 1 35 0 1037 151 63 39 chr5 54260269 54260474 -148825058 - MER2 DNA MER2_type -135 210 1 1443 236 135 16 chr5 54260590 54261034 -148824498 + MLT1D LTR MaLR 1 497 -8 895 206 70 73 chr5 54261898 54262184 -148823348 - AluJb SINE Alu -2 310 26 519 218 158 55 chr5 54263670 54263898 -148821634 + L1MC5 LINE L1 7331 7534 -427 189 0 0 0 chr5 54263898 54263919 -148821613 + (CA)n Simple_repeat Simple_repeat 2 22 0 519 218 158 55 chr5 54263919 54264075 -148821457 + L1MC5 LINE L1 7534 7755 -206 1533 167 49 29 chr5 54264852 54265158 -148820374 + AluJo SINE Alu 1 312 0 2822 160 40 94 chr5 54265251 54265982 -148819550 - LTR8 LTR ERV1 0 691 1 180 286 0 0 chr5 54266560 54266602 -148818930 - MIR3 SINE MIR -52 156 115 194 291 18 0 chr5 54267428 54267483 -148818049 + L2 LINE L2 3193 3248 -24 288 366 50 10 chr5 54267699 54267832 -148817700 - MIR SINE MIR -69 139 4 326 203 0 29 chr5 54268297 54268366 -148817166 + AluJo SINE Alu 34 100 -202 322 259 16 3 chr5 54268469 54268582 -148816950 - L1MD2 LINE L1 -45 7950 6195 789 224 58 22 chr5 54268592 54268815 -148816717 - L1MD2 LINE L1 -226 6133 5903 398 315 46 23 chr5 54269410 54269626 -148815906 + MIR SINE MIR 37 257 -5 979 193 66 0 chr5 54269934 54270115 -148815417 + AluJo SINE Alu 85 277 -35 1448 190 55 5 chr5 54270724 54271050 -148814482 + MER33 DNA MER1_type 1 324 0 21 0 0 0 chr5 54273477 54273498 -148812034 + AT_rich Low_complexity Low_complexity 1 21 0 310 224 12 35 chr5 54273503 54273588 -148811944 + L1MCa LINE L1 1992 2074 -4352 255 77 64 13 chr5 54273663 54273741 -148811791 + (TA)n Simple_repeat Simple_repeat 1 82 0 1615 201 28 45 chr5 54273787 54274184 -148811348 - MLT1B LTR MaLR 0 390 1 26 50 0 0 chr5 54274221 54274261 -148811271 + AT_rich Low_complexity Low_complexity 1 40 0 2198 110 17 0 chr5 54274885 54275184 -148810348 + AluSx SINE Alu 1 304 -8 636 295 48 31 chr5 54275472 54275699 -148809833 + MIR SINE MIR 14 244 -18 403 328 115 45 chr5 54275849 54276456 -148809076 - L2 LINE L2 -823 2491 1842 25 0 0 0 chr5 54276461 54276486 -148809046 + AT_rich Low_complexity Low_complexity 1 25 0 956 97 0 0 chr5 54276586 54276720 -148808812 - AluSg/x SINE Alu 0 310 177 6474 46 7 1 chr5 54276873 54277692 -148807840 - L1P LINE L1 -914 5232 4409 412 303 118 26 chr5 54278240 54278468 -148807064 + MIR SINE MIR 14 262 0 1828 192 29 16 chr5 54278772 54279128 -148806404 + MLT1A1 LTR MaLR 1 364 -1 231 296 110 46 chr5 54279942 54280109 -148805423 - L1ME4a LINE L1 -6 6115 5960 514 135 22 0 chr5 54280109 54280198 -148805334 + L1MA6 LINE L1 6210 6300 0 231 296 110 46 chr5 54280198 54280550 -148804982 - L1ME4a LINE L1 -161 5960 5563 22 35 0 0 chr5 54281858 54281887 -148803645 + AT_rich Low_complexity Low_complexity 1 29 0 324 378 78 17 chr5 54281953 54282133 -148803399 + MER91A DNA MER1_type 1 191 -5 514 298 43 55 chr5 54282213 54282468 -148803064 + MLT1J LTR MaLR 1 252 -259 4031 160 9 9 chr5 54283282 54284422 -148801110 + L1MA4 LINE L1 4806 5941 -359 228 135 0 0 chr5 54284489 54284526 -148801006 + (CA)n Simple_repeat Simple_repeat 2 38 0 1501 181 45 21 chr5 54285557 54285844 -148799688 - AluJo SINE Alu -13 299 6 194 311 72 18 chr5 54286013 54286180 -148799352 + L2 LINE L2 2740 2915 -399 567 241 108 6 chr5 54286599 54286757 -148798775 + MIR SINE MIR 82 255 -7 247 358 48 36 chr5 54286848 54287013 -148798519 - L3 LINE CR1 -706 871 705 243 298 107 16 chr5 54288263 54288384 -148797148 - L2 LINE L2 0 3272 3141 25 0 0 0 chr5 54288854 54288879 -148796653 + AT_rich Low_complexity Low_complexity 1 25 0 351 302 9 35 chr5 54292675 54292791 -148792741 + MIR3 SINE MIR 65 177 -31 21 0 0 0 chr5 54293683 54293704 -148791828 + AT_rich Low_complexity Low_complexity 1 21 0 809 164 0 22 chr5 54293770 54293904 -148791628 + AluJo SINE Alu 1 131 -171 375 215 125 69 chr5 54295030 54295174 -148790358 - MER5B DNA MER1_type -5 173 22 2228 125 22 25 chr5 54295305 54295666 -148789866 + THE1B LTR MaLR 5 364 0 507 202 168 8 chr5 54295747 54295866 -148789666 - MER5B DNA MER1_type -39 139 2 1026 173 12 0 chr5 54295902 54296075 -148789457 + AluJo SINE Alu 134 308 -4 399 157 0 0 chr5 54296076 54296146 -148789386 + GA-rich Low_complexity Low_complexity 4 73 0 1025 99 11 17 chr5 54296148 54296329 -148789203 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 191 163 0 23 chr5 54296331 54296374 -148789158 + GA-rich Low_complexity Low_complexity 2 43 0 422 114 14 0 chr5 54296474 54296544 -148788988 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 241 323 65 0 chr5 54297114 54297207 -148788325 - MER81 DNA DNA -15 99 1 37 23 0 0 chr5 54297910 54297954 -148787578 + AT_rich Low_complexity Low_complexity 1 44 0 706 227 95 62 chr5 54298218 54298491 -148787041 + LTR33A LTR ERVL 218 499 -24 811 302 35 31 chr5 54298504 54299044 -148786488 - L1M4 LINE L1 -2158 3988 3447 1257 296 102 56 chr5 54299061 54300211 -148785321 - L1MEd LINE L1 -4915 1204 2 484 275 55 25 chr5 54300454 54300654 -148784878 - L1ME LINE L1 -509 5612 5407 25 0 0 0 chr5 54300714 54300739 -148784793 + AT_rich Low_complexity Low_complexity 1 25 0 222 62 0 0 chr5 54301480 54301512 -148784020 + (A)n Simple_repeat Simple_repeat 1 32 0 1104 222 29 42 chr5 54302383 54302629 -148782903 + AluJo SINE Alu 1 249 -63 1972 153 51 17 chr5 54302629 54302981 -148782551 + THE1B LTR MaLR 1 364 0 11854 83 8 3 chr5 54302981 54304554 -148780978 + THE1B-int LTR MaLR 1 1580 0 1962 107 123 18 chr5 54304554 54304879 -148780653 + THE1B LTR MaLR 5 364 0 1104 222 29 42 chr5 54304879 54304936 -148780596 + AluJo SINE Alu 246 302 -10 461 333 73 8 chr5 54305098 54305332 -148780200 + MLT1L LTR MaLR 360 608 -7 26 50 0 0 chr5 54305996 54306036 -148779496 + AT_rich Low_complexity Low_complexity 1 40 0 195 321 37 73 chr5 54307035 54307144 -148778388 + L2 LINE L2 3168 3272 0 2199 96 0 4 chr5 54307630 54307911 -148777621 - AluSq SINE Alu -33 280 1 281 258 16 3 chr5 54307948 54308067 -148777465 + MER5A DNA MER1_type 9 168 -10 1304 120 0 5 chr5 54308535 54308719 -148776813 + AluSp SINE Alu 118 300 -13 572 158 0 0 chr5 54309196 54309297 -148776235 + AluJb SINE Alu 209 309 -3 2131 115 3 0 chr5 54309547 54309834 -148775698 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr5 54309858 54309886 -148775646 + AT_rich Low_complexity Low_complexity 1 28 0 2063 120 3 13 chr5 54310555 54310864 -148774668 - AluSg SINE Alu -4 306 1 361 324 215 8 chr5 54311347 54311603 -148773929 + ERVL LTR ERVL 3616 3924 -1840 466 147 0 77 chr5 54311603 54311746 -148773786 + AluSq/x SINE Alu 1 132 -181 24 32 0 0 chr5 54313039 54313070 -148772462 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 149 0 chr5 54313796 54313903 -148771629 + MIR3 SINE MIR 42 164 -44 2591 106 5 11 chr5 54314586 54314963 -148770569 - THE1C LTR MaLR 0 375 1 302 331 87 8 chr5 54315437 54315564 -148769968 + MIR3 SINE MIR 61 197 -11 440 286 60 76 chr5 54316112 54316427 -148769105 + MER46C DNA MER2_type 8 317 -21 2350 91 0 0 chr5 54316953 54317260 -148768272 - AluY SINE Alu -4 307 1 296 237 122 20 chr5 54317410 54317544 -148767988 + MLT1J1 LTR MaLR 245 412 -19 265 184 0 0 chr5 54317599 54317648 -148767884 - MLT1J2 LTR MaLR -379 71 23 28 29 0 0 chr5 54318134 54318169 -148767363 + AT_rich Low_complexity Low_complexity 1 35 0 189 373 0 0 chr5 54318517 54318584 -148766948 + MIR SINE MIR 49 115 -93 504 189 21 0 chr5 54318964 54319059 -148766473 - FLAM_A SINE Alu -26 116 20 2132 149 8 3 chr5 54319664 54320032 -148765500 - L1PB3 LINE L1 -2 6152 5783 377 165 0 13 chr5 54320035 54320114 -148765418 + (TA)n Simple_repeat Simple_repeat 1 78 0 374 148 0 0 chr5 54320114 54320175 -148765357 - L1PB3 LINE L1 -360 5791 5731 36 0 0 0 chr5 54321068 54321104 -148764428 + AT_rich Low_complexity Low_complexity 1 36 0 206 320 39 29 chr5 54321111 54321214 -148764318 + MIR SINE MIR 38 141 -121 852 116 31 8 chr5 54325337 54325466 -148760066 + AluSq/x SINE Alu 1 132 -181 374 249 133 23 chr5 54327175 54327348 -148758184 - L1 LINE L1 -2582 3564 3373 * 2048 181 30 37 chr5 54327346 54327923 -148757609 + L1MA9 LINE L1 5622 6290 -22 191 237 184 0 chr5 54327985 54328061 -148757471 + MIR3 SINE MIR 114 203 -5 7313 57 3 1 chr5 54328200 54329135 -148756397 + L1P LINE L1 3977 4913 -1233 632 175 25 12 chr5 54329236 54329396 -148756136 + CT-rich Low_complexity Low_complexity 3 164 0 465 204 21 18 chr5 54329424 54329691 -148755841 + CT-rich Low_complexity Low_complexity 1 267 0 2156 115 7 0 chr5 54330228 54330523 -148755009 - AluSx SINE Alu -15 297 1 850 244 15 5 chr5 54330602 54330807 -148754725 + MER63A DNA MER1_type 4 210 0 182 364 11 11 chr5 54330996 54331084 -148754448 - L2 LINE L2 -1 3312 3225 430 333 5 58 chr5 54331428 54331617 -148753915 + MLT1K LTR MaLR 141 319 -269 2379 97 0 0 chr5 54331675 54331984 -148753548 + AluSc SINE Alu 1 309 0 2338 71 0 0 chr5 54332553 54332858 -148752674 - AluY SINE Alu 0 307 3 457 254 90 53 chr5 54332860 54333049 -148752483 - MIR SINE MIR 0 262 67 1662 160 44 24 chr5 54333302 54333596 -148751936 + AluJb SINE Alu 1 300 -12 2283 133 11 6 chr5 54333987 54334348 -148751184 - MER47A DNA MER2_type 0 366 4 2034 115 0 4 chr5 54334538 54334848 -148750684 - AluSx SINE Alu 0 343 35 21 57 0 0 chr5 54334848 54334883 -148750649 + AT_rich Low_complexity Low_complexity 1 35 0 507 261 81 14 chr5 54334928 54335211 -148750321 + L1ME LINE L1 5258 5559 -605 2424 71 3 3 chr5 54335740 54336051 -148749481 - AluY SINE Alu 0 311 1 2112 105 7 7 chr5 54336427 54336722 -148748810 + AluSq SINE Alu 1 295 -18 2611 147 56 7 chr5 54336990 54337452 -148748080 + MER31A LTR ERV1 1 485 0 721 224 56 119 chr5 54337499 54337785 -148747747 + MER31A-int LTR ERV1 15 282 -4654 630 228 19 70 chr5 54337763 54337978 -148747554 + MER31A-int LTR ERV1 201 404 -4532 * 974 183 119 87 chr5 54338126 54338307 -148747225 + MER31A-int LTR ERV1 887 1061 -3875 1878 120 63 3 chr5 54338307 54338591 -148746941 - AluSx SINE Alu -11 301 1 974 183 119 87 chr5 54338591 54338813 -148746719 + MER31A-int LTR ERV1 1061 1303 -3633 656 256 23 28 chr5 54338798 54339013 -148746519 + MER31A-int LTR ERV1 1909 2122 -2749 * 9984 177 69 50 chr5 54339085 54340803 -148744729 + MER31A-int LTR ERV1 2373 4106 -830 1996 117 3 7 chr5 54340803 54341093 -148744439 + AluSg SINE Alu 10 298 -12 9984 177 69 50 chr5 54341093 54341914 -148743618 + MER31A-int LTR ERV1 4106 4910 -26 2436 151 67 2 chr5 54341920 54342337 -148743195 + MER31A LTR ERV1 1 444 -41 2717 131 7 16 chr5 54342337 54342773 -148742759 - MSTB1 LTR MaLR 0 432 1 2301 88 10 0 chr5 54342783 54343078 -148742454 - AluSx SINE Alu -14 298 1 590 341 64 55 chr5 54343431 54344245 -148741287 + HERVL LTR ERVL 4160 5019 -745 1279 117 6 0 chr5 54344385 54344564 -148740968 + AluSg/x SINE Alu 130 309 -3 1667 120 19 0 chr5 54344575 54344833 -148740699 + L1MC2 LINE L1 5717 5979 -365 858 172 31 22 chr5 54345542 54345860 -148739672 + L1MC2 LINE L1 5921 6342 -2 331 194 42 0 chr5 54345923 54345995 -148739537 + HERVL LTR ERVL 5226 5300 -464 725 269 24 124 chr5 54346448 54346988 -148738544 + LTR67 LTR ERVL 47 532 -25 2235 117 0 0 chr5 54347168 54347468 -148738064 + AluSx SINE Alu 1 300 -12 1386 151 0 13 chr5 54348074 54348299 -148737233 + AluJo SINE Alu 86 307 -5 23 0 0 0 chr5 54348950 54348973 -148736559 + AT_rich Low_complexity Low_complexity 1 23 0 2062 179 14 11 chr5 54349311 54349675 -148735857 + MLT1A1 LTR MaLR 1 365 0 24 0 0 0 chr5 54351319 54351343 -148734189 + AT_rich Low_complexity Low_complexity 1 24 0 513 311 94 56 chr5 54351744 54352076 -148733456 - L1MC4a LINE L1 -1875 5933 5568 2907 119 20 2 chr5 54352076 54352522 -148733010 - L1PA16 LINE L1 -9 6157 5704 513 311 94 56 chr5 54352522 54352774 -148732758 - L1MC4a LINE L1 -2240 5568 5327 2190 110 3 0 chr5 54352866 54353158 -148732374 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr5 54353930 54353953 -148731579 + AT_rich Low_complexity Low_complexity 1 23 0 224 346 59 15 chr5 54354125 54354261 -148731271 - MIR SINE MIR -109 153 12 230 258 0 0 chr5 54354973 54355035 -148730497 + A-rich Low_complexity Low_complexity 1 62 0 26 50 0 0 chr5 54355283 54355323 -148730209 + AT_rich Low_complexity Low_complexity 1 40 0 408 342 98 56 chr5 54355485 54355842 -148729690 + L2 LINE L2 2895 3266 -6 21 0 0 0 chr5 54356484 54356505 -148729027 + AT_rich Low_complexity Low_complexity 1 21 0 1751 132 3 30 chr5 54358784 54359079 -148726453 - AluSx SINE Alu -25 287 1 307 304 74 0 chr5 54359476 54359624 -148725908 + MER103 DNA DNA 8 166 0 245 212 0 15 chr5 54361968 54362034 -148723498 + (TA)n Simple_repeat Simple_repeat 1 65 0 772 211 0 124 chr5 54362069 54362287 -148723245 - MER77 LTR ERV1 -414 191 1 409 98 0 0 chr5 54362533 54362594 -148722938 + MER41B LTR ERV1 487 547 -88 26 0 0 0 chr5 54363740 54363766 -148721766 + AT_rich Low_complexity Low_complexity 1 26 0 688 301 24 70 chr5 54364490 54364819 -148720713 - MLT1I LTR MaLR -14 395 82 260 415 62 0 chr5 54365803 54365979 -148719553 + L2 LINE L2 1065 1251 -2063 703 325 71 80 chr5 54366547 54367476 -148718056 + L2 LINE L2 1936 2856 -458 34 0 0 0 chr5 54367480 54367514 -148718018 + AT_rich Low_complexity Low_complexity 1 34 0 230 218 36 0 chr5 54367739 54367794 -148717738 + L2 LINE L2 3216 3272 0 31 58 0 0 chr5 54368802 54368854 -148716678 + AT_rich Low_complexity Low_complexity 1 52 0 234 213 18 61 chr5 54368889 54369053 -148716479 + (TTAA)n Simple_repeat Simple_repeat 2 158 0 237 246 58 0 chr5 54369057 54369126 -148716406 - L1ME4a LINE L1 -102 6019 5947 249 256 273 42 chr5 54369259 54369567 -148715965 - L1ME4a LINE L1 -336 5785 5407 1783 156 83 56 chr5 54369840 54370377 -148715155 - MLT2A2 LTR ERVL 0 554 1 2047 103 41 0 chr5 54372184 54372475 -148713057 + AluSc SINE Alu 2 304 -5 1567 184 0 0 chr5 54372719 54372974 -148712558 - AluJo SINE Alu -26 286 32 184 319 62 26 chr5 54374310 54374423 -148711109 + L2 LINE L2 3153 3269 -3 298 231 205 58 chr5 54374870 54375026 -148710506 - MER5A DNA MER1_type -7 182 4 207 307 58 44 chr5 54378167 54378304 -148707228 - L2 LINE L2 -49 3264 3126 1819 168 3 0 chr5 54378305 54378602 -148706930 + AluJb SINE Alu 1 298 -14 187 313 24 48 chr5 54381071 54381154 -148704378 - L2 LINE L2 -13 3300 3220 180 264 56 28 chr5 54381293 54381365 -148704167 - L2 LINE L2 -214 3058 2985 276 257 14 0 chr5 54382051 54382125 -148703407 - LTR37A LTR ERV1 -241 185 111 1208 279 39 64 chr5 54382379 54383095 -148702437 - MER31-int LTR ERV1 -835 4101 3404 254 332 78 66 chr5 54383987 54384043 -148701489 - MLT1K LTR MaLR -6 582 528 1342 114 59 27 chr5 54384043 54384262 -148701270 + MER30 DNA MER1_type 5 230 0 254 332 78 66 chr5 54384262 54384449 -148701083 - MLT1K LTR MaLR -60 528 336 258 32 0 0 chr5 54385123 54385154 -148700378 + (TA)n Simple_repeat Simple_repeat 1 31 0 2276 73 0 51 chr5 54385154 54385469 -148700063 - AluSg1 SINE Alu -10 299 1 292 164 0 36 chr5 54385435 54385490 -148700042 - AluSp SINE Alu -134 169 117 730 307 79 59 chr5 54385492 54385896 -148699636 - L2 LINE L2 -3 3269 2858 1483 197 53 11 chr5 54385968 54386252 -148699280 + AluJb SINE Alu 6 301 -11 27 0 0 0 chr5 54386642 54386669 -148698863 + AT_rich Low_complexity Low_complexity 1 27 0 2089 128 6 3 chr5 54387218 54387530 -148698002 - AluSq SINE Alu 0 313 1 269 330 108 52 chr5 54387776 54388588 -148696944 - L2 LINE L2 -1707 1607 750 351 207 216 9 chr5 54389067 54389166 -148696366 + AluJb SINE Alu 3 129 -173 225 0 0 0 chr5 54389166 54389191 -148696341 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 351 207 216 9 chr5 54389191 54389202 -148696330 + AluJb SINE Alu 129 136 -166 420 207 16 90 chr5 54390703 54390891 -148694641 + AluSg/x SINE Alu 117 290 -19 278 298 99 7 chr5 54390989 54391352 -148694180 - L1MC/D LINE L1 -603 5518 5365 395 87 14 0 chr5 54392698 54392767 -148692765 + (GA)n Simple_repeat Simple_repeat 1 70 0 338 246 47 143 chr5 54393104 54393405 -148692127 - HAL1 LINE L1 -403 2104 1833 1586 248 78 64 chr5 54393407 54393870 -148691662 - HAL1 LINE L1 -725 1782 1327 1889 144 6 28 chr5 54393870 54394189 -148691343 - AluJo SINE Alu 0 312 1 1586 248 78 64 chr5 54394189 54394680 -148690852 - HAL1 LINE L1 -1180 1327 814 309 26 0 0 chr5 54394947 54394985 -148690547 + (TG)n Simple_repeat Simple_repeat 2 39 0 234 91 0 0 chr5 54395020 54395064 -148690468 + LTR66 LTR ERVL 396 439 -171 249 185 0 0 chr5 54395084 54395138 -148690394 - L1MC4 LINE L1 -1339 6703 6650 21 57 0 0 chr5 54395593 54395628 -148689904 + AT_rich Low_complexity Low_complexity 1 35 0 234 268 116 65 chr5 54396330 54396468 -148689064 + MLT1L LTR MaLR 19 163 -452 297 210 29 172 chr5 54396605 54396919 -148688613 + MLT1L LTR MaLR 347 615 0 461 293 50 36 chr5 54398126 54398337 -148687195 + MIR SINE MIR 38 255 -7 1756 187 0 0 chr5 54398337 54398643 -148686889 - AluJb SINE Alu 0 306 1 2028 184 41 41 chr5 54398697 54399158 -148686374 + MLT1D LTR MaLR 1 461 -44 246 128 0 0 chr5 54399163 54399202 -148686330 + (T)n Simple_repeat Simple_repeat 1 39 0 1070 57 7 0 chr5 54399508 54399649 -148685883 - L1PA8 LINE L1 0 6172 6031 323 337 17 58 chr5 54399992 54400164 -148685368 - HAL1 LINE L1 -2298 209 45 1528 179 189 5 chr5 54401388 54401807 -148683725 - LTR54B LTR ERV1 -2 496 1 273 261 0 98 chr5 54402020 54402112 -148683420 - L2 LINE L2 -4 3309 3227 949 298 131 84 chr5 54402133 54403232 -148682300 - L2 LINE L2 -515 2799 1649 22 70 0 0 chr5 54403690 54403733 -148681799 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr5 54405412 54405442 -148680090 + AT_rich Low_complexity Low_complexity 1 30 0 254 320 34 53 chr5 54406065 54406271 -148679261 - MER31-int LTR ERV1 -892 4044 3843 27 0 0 0 chr5 54406344 54406371 -148679161 + AT_rich Low_complexity Low_complexity 1 27 0 1991 140 7 0 chr5 54406377 54406670 -148678862 + AluSq SINE Alu 1 295 -18 1944 146 7 0 chr5 54407425 54407720 -148677812 + AluSx SINE Alu 1 297 -15 42561 52 2 3 chr5 54407988 54414145 -148671387 - L1PA4 LINE L1 -1 6154 8 2270 111 0 0 chr5 54416116 54416414 -148669118 + AluSq SINE Alu 1 298 -15 22 56 0 0 chr5 54417064 54417100 -148668432 + AT_rich Low_complexity Low_complexity 1 36 0 486 250 131 12 chr5 54418167 54418335 -148667197 - MER5A DNA MER1_type 0 189 2 7053 92 10 199 chr5 54419315 54421013 -148664519 + SVA Other Other 10 1386 0 1537 187 54 3 chr5 54422350 54422665 -148662867 - MER46B DNA MER2_type -8 228 23 2173 144 25 13 chr5 54422667 54423064 -148662468 + Tigger2 DNA MER2_type 2 403 -2315 792 171 15 93 chr5 54423071 54423276 -148662256 - L1PB4 LINE L1 -3 6153 5965 13579 134 47 18 chr5 54423281 54425546 -148659986 + Tigger2 DNA MER2_type 386 2716 -2 235 257 200 7 chr5 54425654 54425794 -148659738 - L1PB4 LINE L1 -743 5557 5391 782 159 119 13 chr5 54425868 54426019 -148659513 + FAM SINE Alu 1 167 -8 1653 66 0 0 chr5 54426096 54426309 -148659223 - L1PA5 LINE L1 -7 6147 5935 1283 45 0 13 chr5 54426409 54426566 -148658966 - AluY SINE Alu -47 264 110 904 266 145 58 chr5 54426566 54427627 -148657905 - L1MEc LINE L1 -4075 2321 1169 573 246 101 42 chr5 54427636 54427924 -148657608 - L1MEc LINE L1 -5285 920 616 336 298 56 43 chr5 54427945 54428106 -148657426 - L2 LINE L2 -22 3291 3129 26 0 0 0 chr5 54428147 54428173 -148657359 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 54430718 54430746 -148654786 + AT_rich Low_complexity Low_complexity 1 28 0 347 261 116 43 chr5 54432133 54432271 -148653261 + MIR SINE MIR 6 153 -109 21 57 0 0 chr5 54432343 54432378 -148653154 + AT_rich Low_complexity Low_complexity 1 35 0 229 115 0 0 chr5 54432706 54432758 -148652774 - LTR66 LTR ERVL -165 445 394 207 0 0 0 chr5 54432758 54432781 -148652751 + (CA)n Simple_repeat Simple_repeat 2 24 0 7501 28 10 0 chr5 54432791 54434306 -148651226 - L1PA5 LINE L1 -9 6145 4624 673 131 9 9 chr5 54434307 54434414 -148651118 + FLAM_C SINE Alu 27 133 -10 700 158 36 7 chr5 54434416 54434555 -148650977 + L1MC3 LINE L1 7617 7759 -26 646 271 113 17 chr5 54637223 54637514 -148448018 - L2 LINE L2 -542 2772 2454 574 185 75 48 chr5 54637619 54637710 -148447822 + MLT1B LTR MaLR 1 99 -291 2118 126 83 6 chr5 54637710 54638058 -148447474 - THE1C LTR MaLR 0 375 1 574 185 75 48 chr5 54638058 54638112 -148447420 + MLT1B LTR MaLR 99 150 -240 262 141 141 65 chr5 54638190 54638282 -148447250 + MLT1B LTR MaLR 274 372 -2 575 27 14 0 chr5 54639086 54639159 -148446373 + (CA)n Simple_repeat Simple_repeat 2 75 0 195 204 0 0 chr5 54643527 54643571 -148441961 + (TG)n Simple_repeat Simple_repeat 1 44 0 357 43 0 0 chr5 54643643 54643690 -148441842 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 872 19 9 0 chr5 54644583 54644689 -148440843 + (TTTCC)n Simple_repeat Simple_repeat 5 111 0 464 250 12 70 chr5 54644896 54645068 -148440464 - MLT1F LTR MaLR 0 542 381 277 242 30 30 chr5 54645079 54645145 -148440387 + tRNA-Ala-GCG tRNA tRNA 3 68 -7 234 252 2 2 chr5 54646070 54646146 -148439386 - L1 LINE L1 -1626 4520 4445 225 211 26 26 chr5 54648569 54648645 -148436887 + A-rich Low_complexity Low_complexity 3 78 0 2154 233 16 2 chr5 54650020 54650578 -148434954 + L1 LINE L1 3885 4450 -1696 328 264 38 75 chr5 54652253 54652359 -148433173 + MLT1E1 LTR MaLR 3 104 -550 316 243 56 37 chr5 54652783 54652890 -148432642 + MLT1E1 LTR MaLR 382 490 -164 199 222 14 14 chr5 54653090 54653162 -148432370 + CT-rich Low_complexity Low_complexity 4 75 0 869 290 104 21 chr5 54653616 54654059 -148431473 - MLT1E LTR MaLR -72 521 39 188 255 0 0 chr5 54656283 54656334 -148429198 - MIR SINE MIR -102 106 56 189 121 0 0 chr5 54659509 54659542 -148425990 + (A)n Simple_repeat Simple_repeat 1 33 0 231 285 104 35 chr5 54659698 54659842 -148425690 - MER3 DNA MER1_type -55 154 1 407 266 111 29 chr5 54661040 54661247 -148424285 - MIR SINE MIR -2 260 37 263 320 47 0 chr5 54661301 54661429 -148424103 - MIR SINE MIR -70 192 59 398 125 167 10 chr5 54661876 54661972 -148423560 + L1 LINE L1 3584 3694 -2452 24 32 0 0 chr5 54664951 54664982 -148420550 + AT_rich Low_complexity Low_complexity 1 31 0 1940 101 74 20 chr5 54668473 54668769 -148416763 - AluSx SINE Alu 0 312 1 2423 88 0 0 chr5 54668871 54669178 -148416354 + AluY SINE Alu 1 307 -4 455 283 60 76 chr5 54669704 54670019 -148415513 - MER46C DNA MER2_type -21 317 8 277 346 85 8 chr5 54670567 54670697 -148414835 - MIR3 SINE MIR -11 197 58 2637 106 5 11 chr5 54671168 54671545 -148413987 + THE1C LTR MaLR 1 375 0 19867 56 2 2 chr5 54672244 54674764 -148410768 - L1P LINE L1 -2285 3861 1340 1445 184 58 19 chr5 54674771 54675081 -148410451 - L1P LINE L1 -5740 406 85 8470 49 3 1 chr5 54675183 54677016 -148408516 + L1PA5 LINE L1 4321 6154 0 7698 35 0 0 chr5 54677432 54678783 -148406749 + L1PA3 LINE L1 4862 6212 0 1900 110 51 20 chr5 54678863 54679155 -148406377 + AluSc SINE Alu 3 303 -6 24 0 0 0 chr5 54679571 54679595 -148405937 + AT_rich Low_complexity Low_complexity 1 24 0 4042 35 8 12 chr5 54679615 54680108 -148405424 - L1PA4 LINE L1 -3 6152 5662 1205 345 76 18 chr5 54680114 54681243 -148404289 - L2 LINE L2 -1156 2158 964 204 275 55 46 chr5 54681308 54681417 -148404115 + MIR3 SINE MIR 86 195 -13 250 78 0 78 chr5 54681528 54681579 -148403953 + Alu SINE Alu 254 300 0 255 324 29 41 chr5 54681649 54681828 -148403704 + MIR SINE MIR 16 192 -63 248 232 18 0 chr5 54682881 54682937 -148402595 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 760 223 69 6 chr5 54683230 54683405 -148402127 - MER5A DNA MER1_type -3 186 1 217 346 40 0 chr5 54683499 54683600 -148401932 - MIR3 SINE MIR -41 167 63 3174 163 30 0 chr5 54683968 54684507 -148401025 + Tigger1 DNA MER2_type 1 555 -1863 14969 37 7 4 chr5 54684607 54687450 -148398082 - L1PA4 LINE L1 -305 5850 2999 674 185 25 49 chr5 54688041 54688203 -148397329 - L1PB4 LINE L1 -1 6155 5998 2813 268 67 51 chr5 54688353 54690079 -148395453 - L1PA15-16 LINE L1 -4469 2380 743 317 271 75 0 chr5 54690775 54690882 -148394650 - MIR SINE MIR 0 262 148 442 227 116 12 chr5 54690900 54691072 -148394460 - L1MB3 LINE L1 -7 6176 5987 199 277 31 31 chr5 54691081 54691146 -148394386 - MIR SINE MIR -67 141 77 419 38 0 0 chr5 54693477 54693530 -148392002 + MADE1 DNA Mariner 1 53 -27 1651 184 67 12 chr5 54693795 54694197 -148391335 - L1 LINE L1 -1312 4834 4411 2503 56 15 0 chr5 54694297 54694636 -148390896 + L1PA4 LINE L1 5812 6155 0 26 0 0 0 chr5 54695408 54695434 -148390098 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 54695471 54695492 -148390040 + AT_rich Low_complexity Low_complexity 1 21 0 702 192 187 5 chr5 54697335 54697533 -148387999 - MER31B LTR ERV1 -8 458 225 543 232 48 77 chr5 54697569 54697776 -148387756 - L1ME2 LINE L1 -3 6161 5961 4754 147 13 12 chr5 54697777 54698792 -148386740 - L1MA8 LINE L1 -229 6062 5045 1127 127 6 0 chr5 54698792 54698957 -148386575 - MER4A LTR ERV1 0 664 499 187 313 62 0 chr5 54699630 54699710 -148385822 + MIR SINE MIR 151 235 -27 2310 84 0 31 chr5 54699905 54700225 -148385307 - AluY SINE Alu -1 310 1 239 299 81 0 chr5 54701190 54701277 -148384255 + L2 LINE L2 2943 3036 -277 314 198 77 44 chr5 54701315 54701406 -148384126 + L2 LINE L2 3155 3248 -65 399 328 75 0 chr5 54702270 54702456 -148383076 - MIR SINE MIR -2 260 61 2916 224 34 31 chr5 54702456 54702885 -148382647 + L1MA7 LINE L1 3826 4259 -1887 210 37 0 0 chr5 54702885 54702912 -148382620 + (CATG)n Simple_repeat Simple_repeat 3 29 0 2916 224 34 31 chr5 54702912 54703311 -148382221 + L1MA7 LINE L1 4259 4656 -1490 295 183 28 28 chr5 54703315 54703386 -148382146 + L1PA15-16 LINE L1 276 346 -6503 4701 152 26 23 chr5 54703395 54704252 -148381280 - L1PA16 LINE L1 0 6166 5308 992 236 25 63 chr5 54704234 54704518 -148381014 + L1PA15-16 LINE L1 415 687 -6162 * 2376 161 60 60 chr5 54704879 54705495 -148380037 - L1MA7 LINE L1 -1312 4834 4219 4380 170 59 30 chr5 54705501 54706722 -148378810 + L1MA7 LINE L1 4848 6117 -174 2354 53 0 27 chr5 54706722 54707022 -148378510 + AluY SINE Alu 1 292 -19 4380 170 59 30 chr5 54707022 54707201 -148378331 + L1MA7 LINE L1 6117 6289 -2 380 292 44 0 chr5 54707231 54707344 -148378188 - MIR SINE MIR -108 154 37 233 294 185 0 chr5 54707560 54707652 -148377880 + MIR SINE MIR 36 144 -64 1776 174 37 42 chr5 54708496 54708926 -148376606 - MSTA LTR MaLR 0 428 1 35 0 0 0 chr5 54709103 54709138 -148376394 + AT_rich Low_complexity Low_complexity 1 35 0 1014 148 92 0 chr5 54709244 54709440 -148376092 - L1PA13 LINE L1 -2 6161 5948 5806 158 43 29 chr5 54709440 54711336 -148374196 - L1PA13 LINE L1 -25 6138 4219 1988 143 3 0 chr5 54711336 54711622 -148373910 + AluSx SINE Alu 3 289 -23 5806 158 43 29 chr5 54711622 54711696 -148373836 - L1PA13 LINE L1 -1944 4219 4148 3385 164 13 11 chr5 54711720 54712800 -148372732 - L1PA13 LINE L1 -411 5754 4675 1183 197 37 21 chr5 54712904 54713229 -148372303 - L1 LINE L1 -772 5374 5045 1272 113 11 0 chr5 54713229 54713414 -148372118 - MER4B LTR ERV1 0 610 424 263 95 0 0 chr5 54713418 54713460 -148372072 - MADE1 DNA Mariner -4 76 35 273 111 22 0 chr5 54713547 54713592 -148371940 - MADE1 DNA Mariner -34 46 1 2200 120 99 18 chr5 54713592 54713985 -148371547 - MER4B LTR ERV1 -185 425 1 1863 165 36 43 chr5 54713986 54714379 -148371153 - L1 LINE L1 -1099 5047 4658 549 288 62 10 chr5 54714418 54714643 -148370889 - MLT1H LTR MaLR -3 546 278 4101 124 8 11 chr5 54714651 54714855 -148370677 - MER41B LTR ERV1 -8 627 424 2198 133 30 25 chr5 54714855 54715217 -148370315 - THE1B LTR MaLR 0 364 1 4101 124 8 11 chr5 54715217 54715641 -148369891 - MER41B LTR ERV1 -211 424 1 543 313 108 8 chr5 54715641 54715886 -148369646 - MLT1H LTR MaLR -267 282 11 338 222 0 50 chr5 54715887 54715986 -148369546 - L1ME2 LINE L1 -234 5930 5837 1461 222 47 52 chr5 54715988 54716124 -148369408 - MLT1C LTR MaLR -43 424 289 4241 139 34 21 chr5 54716124 54716880 -148368652 + MER4E LTR ERV1 1 766 0 1461 222 47 52 chr5 54716880 54717167 -148368365 - MLT1C LTR MaLR -178 289 3 1267 221 47 36 chr5 54717171 54717396 -148368136 - L1ME2 LINE L1 -441 5723 5491 2079 109 10 7 chr5 54717396 54717700 -148367832 + AluSq SINE Alu 1 305 -8 1267 221 47 36 chr5 54717700 54717858 -148367674 - L1ME2 LINE L1 -673 5491 5336 2019 187 38 115 chr5 54717955 54718485 -148367047 - MLT1D LTR MaLR -16 489 1 789 233 147 20 chr5 54718487 54718732 -148366800 + LTR50 LTR ERVL 3 278 -517 360 239 188 24 chr5 54718853 54719066 -148366466 + LTR50 LTR ERVL 528 775 -20 315 0 0 0 chr5 54719510 54719545 -148365987 + (CA)n Simple_repeat Simple_repeat 1 35 0 35 54 0 0 chr5 54721381 54721437 -148364095 + AT_rich Low_complexity Low_complexity 1 56 0 1875 152 17 0 chr5 54722598 54722887 -148362645 - AluSx SINE Alu -16 296 3 901 87 0 0 chr5 54724329 54724444 -148361088 + AluSq/x SINE Alu 1 115 -198 502 231 88 28 chr5 54724671 54724853 -148360679 + L1MC5 LINE L1 7721 7913 -48 22 56 5 0 chr5 54725084 54725168 -148360364 + AT_rich Low_complexity Low_complexity 1 50 0 2192 229 43 24 chr5 54726221 54726775 -148358757 + MER90 LTR ERV1 1 565 -10 2855 157 14 0 chr5 54726867 54727359 -148358173 - L1MB3 LINE L1 0 6183 5685 220 221 211 29 chr5 54727810 54727914 -148357618 + L2 LINE L2 3191 3313 0 208 279 82 74 chr5 54727931 54728053 -148357479 - L2 LINE L2 -25 3288 3166 24 32 0 0 chr5 54728653 54728684 -148356848 + AT_rich Low_complexity Low_complexity 1 31 0 2121 70 0 4 chr5 54729283 54729542 -148355990 + AluY SINE Alu 1 258 -53 286 338 26 52 chr5 54729624 54729698 -148355834 - MIR3 SINE MIR -5 203 129 2690 173 2 11 chr5 54729698 54730166 -148355366 + MLT2C2 LTR ERVL 1 464 0 286 338 26 52 chr5 54730166 54730245 -148355287 - MIR3 SINE MIR -79 129 54 272 276 89 47 chr5 54730694 54730853 -148354679 - MIR SINE MIR -59 203 35 659 306 59 24 chr5 54733448 54733736 -148351796 + LTR16A1 LTR ERVL 160 457 0 246 316 143 0 chr5 54734556 54734654 -148350878 - L2 LINE L2 -15 3298 3187 257 336 25 34 chr5 54735092 54735211 -148350321 - MER5A DNA MER1_type -25 164 47 1057 173 15 5 chr5 54735226 54735428 -148350104 + MER3 DNA MER1_type 1 204 -5 196 265 44 15 chr5 54735674 54735742 -148349790 + L2 LINE L2 3202 3271 -1 414 222 63 167 chr5 54735983 54736054 -148349478 + MIR SINE MIR 40 117 -145 2082 131 3 13 chr5 54736054 54736367 -148349165 - AluSq SINE Alu -3 310 1 414 222 63 167 chr5 54736367 54736384 -148349148 + MIR SINE MIR 117 134 -128 2400 96 0 0 chr5 54736384 54736687 -148348845 - AluSx SINE Alu -9 303 1 414 222 63 167 chr5 54736687 54736818 -148348714 + MIR SINE MIR 134 237 -25 252 195 0 65 chr5 54737611 54737688 -148347844 + LTR67 LTR ERVL 458 529 -28 789 251 45 45 chr5 54737946 54738007 -148347525 - MER58A DNA MER1_type -2197 223 163 1772 176 31 8 chr5 54738007 54738360 -148347172 + MLT1A1 LTR MaLR 5 365 0 789 251 45 45 chr5 54738360 54738521 -148347011 - MER58A DNA MER1_type -2256 164 1 245 305 0 0 chr5 54738522 54738581 -148346951 + L2 LINE L2 3255 3313 0 495 298 89 21 chr5 54738803 54738829 -148346703 - MIR SINE MIR -6 256 233 356 302 36 52 chr5 54738829 54739021 -148346511 + MER5A DNA MER1_type 1 189 0 495 298 89 21 chr5 54739021 54739229 -148346303 - MIR SINE MIR -29 233 6 209 366 61 0 chr5 54741500 54741582 -148343950 + L2 LINE L2 3199 3285 -28 1438 213 0 20 chr5 54741704 54742004 -148343528 + MLT1A1 LTR MaLR 72 365 0 1350 248 60 42 chr5 54743595 54744047 -148341485 + MLT1C LTR MaLR 5 464 -3 189 0 0 0 chr5 54745127 54745148 -148340384 + (CATCT)n Simple_repeat Simple_repeat 3 23 0 338 105 0 18 chr5 54745482 54745539 -148339993 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 1843 166 0 0 chr5 54745544 54745822 -148339710 - AluSx SINE Alu -34 278 1 1217 141 40 83 chr5 54748034 54748311 -148337221 + MLT2C2 LTR ERVL 1 265 -199 22205 62 3 5 chr5 54748367 54751231 -148334301 + L1P LINE L1 1 2859 -3287 8884 148 27 15 chr5 54751435 54752360 -148333172 + Tigger1 DNA MER2_type 865 1817 -601 2334 78 0 10 chr5 54752360 54752654 -148332878 - AluY SINE Alu -20 291 1 8884 148 27 15 chr5 54752654 54753264 -148332268 + Tigger1 DNA MER2_type 1817 2418 0 366 222 0 0 chr5 54753504 54753576 -148331956 + L2 LINE L2 3201 3272 0 22 0 0 0 chr5 54753836 54753858 -148331674 + AT_rich Low_complexity Low_complexity 1 22 0 2297 171 6 49 chr5 54753864 54754332 -148331200 - L1MB2 LINE L1 -36 6135 5688 1805 123 31 27 chr5 54754333 54754626 -148330906 + MER7A DNA MER2_type 55 346 0 3763 194 31 12 chr5 54754629 54755887 -148329645 - L1MB2 LINE L1 -491 5680 4389 23 0 0 0 chr5 54756186 54756209 -148329323 + AT_rich Low_complexity Low_complexity 1 23 0 425 262 63 16 chr5 54758272 54758398 -148327134 - L2 LINE L2 0 3313 3182 290 294 98 101 chr5 54759371 54759588 -148325944 + MIR SINE MIR 4 212 -50 359 336 34 17 chr5 54759894 54760013 -148325519 + L2 LINE L2 3150 3270 -2 257 152 22 0 chr5 54760216 54760262 -148325270 - MER63 DNA MER1_type -36 1024 978 476 209 22 0 chr5 54760266 54760357 -148325175 - MER63 DNA MER1_type -311 751 33 435 308 146 39 chr5 54761480 54761844 -148323688 - L1MB2 LINE L1 -2868 3278 2876 750 230 16 95 chr5 54761904 54762156 -148323376 - MIR SINE MIR 0 262 31 623 205 8 8 chr5 54762540 54762662 -148322870 + MER5B DNA MER1_type 1 122 -56 26 0 0 0 chr5 54762751 54762777 -148322755 + AT_rich Low_complexity Low_complexity 1 26 0 1316 146 67 4 chr5 54762898 54763138 -148322394 + MER2 DNA MER2_type 91 345 0 1723 318 98 60 chr5 54763328 54765074 -148320458 - L2 LINE L2 -251 3021 1217 676 268 87 79 chr5 54765102 54765719 -148319813 - L2 LINE L2 0 3313 2717 253 302 212 50 chr5 54765731 54766109 -148319423 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 54766134 54766170 -148319362 + AT_rich Low_complexity Low_complexity 1 36 0 190 364 33 66 chr5 54766507 54766658 -148318874 + MER5A DNA MER1_type 44 189 0 603 326 94 40 chr5 54766671 54767202 -148318330 + MLT1K LTR MaLR 3 562 -26 349 278 8 53 chr5 54770142 54770275 -148315257 - MIR SINE MIR -41 221 95 412 269 119 25 chr5 54772563 54772723 -148312809 + MER5A DNA MER1_type 9 183 -6 249 83 0 0 chr5 54773488 54773524 -148312008 + (CA)n Simple_repeat Simple_repeat 1 36 0 318 87 0 0 chr5 54774720 54774766 -148310766 + (CA)n Simple_repeat Simple_repeat 1 46 0 976 344 33 9 chr5 54775822 54776243 -148309289 + L2 LINE L2 971 1401 -1913 197 108 27 0 chr5 54776323 54776360 -148309172 + (CA)n Simple_repeat Simple_repeat 1 38 0 1237 301 96 18 chr5 54776380 54777008 -148308524 + L2 LINE L2 1354 2030 -1284 2374 138 16 23 chr5 54777014 54777450 -148308082 - L1MB1 LINE L1 0 6168 5736 542 179 9 0 chr5 54777719 54777825 -148307707 + FRAM SINE Alu 70 176 0 717 253 261 9 chr5 54778053 54778584 -148306948 + LTR50 LTR ERVL 3 785 -10 1555 221 66 18 chr5 54778808 54779247 -148306285 + MLT1C LTR MaLR 8 467 0 471 304 61 17 chr5 54780438 54780619 -148304913 + MIR SINE MIR 49 237 -25 1151 274 25 38 chr5 54781586 54781984 -148303548 - L2 LINE L2 -831 2483 2091 492 378 101 16 chr5 54782013 54782526 -148303006 - L3 LINE CR1 -353 1224 668 29 0 0 0 chr5 54782548 54782577 -148302955 + AT_rich Low_complexity Low_complexity 1 29 0 1923 141 10 10 chr5 54782577 54782876 -148302656 - AluSx SINE Alu -13 299 1 34 24 0 0 chr5 54783013 54783054 -148302478 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 54783306 54783335 -148302197 + AT_rich Low_complexity Low_complexity 1 29 0 3456 27 0 2 chr5 54783792 54784202 -148301330 - L1PA4 LINE L1 -3 6152 5744 397 380 46 37 chr5 54784470 54784901 -148300631 + L1MEd LINE L1 356 790 -5415 594 247 91 62 chr5 54784902 54785387 -148300145 + L1MEd LINE L1 842 1340 -4865 2099 169 9 23 chr5 54785552 54786033 -148299499 + L1P3 LINE L1 6 788 -5673 227 132 0 26 chr5 54786227 54786265 -148299267 - MLT2D LTR ERVL 0 554 518 369 0 0 0 chr5 54786265 54786306 -148299226 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 213 65 19 chr5 54786306 54786343 -148299189 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 54786343 54786413 -148299119 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2258 213 65 19 chr5 54786413 54786693 -148298839 - MLT2B3 LTR ERVL -37 517 197 1781 165 7 0 chr5 54786693 54787027 -148298505 - AluSx SINE Alu 0 336 1 2258 213 65 19 chr5 54787027 54787233 -148298299 - MLT2B3 LTR ERVL -357 197 2 318 105 66 0 chr5 54787232 54787308 -148298224 + (TCTA)n Simple_repeat Simple_repeat 3 83 0 1208 192 52 119 chr5 54787308 54787735 -148297797 - MLT2D LTR ERVL -15 399 2 229 272 41 46 chr5 54788187 54788382 -148297150 + L1MEd LINE L1 2103 2296 -4100 340 221 11 11 chr5 54788465 54788560 -148296972 + HAL1 LINE L1 2258 2352 -155 5883 7 0 7 chr5 54788571 54789246 -148296286 + L1HS LINE L1 5486 6155 0 726 233 93 5 chr5 54790099 54790292 -148295240 - MER63A DNA MER1_type 0 210 1 597 271 61 32 chr5 54790402 54790940 -148294592 + L1MCc LINE L1 1121 1847 -4891 1583 221 47 0 chr5 54790999 54791321 -148294211 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 54791322 54791374 -148294158 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2459 53 20 0 chr5 54791420 54791719 -148293813 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 54791722 54791756 -148293776 + (TA)n Simple_repeat Simple_repeat 1 34 0 306 218 35 113 chr5 54791799 54791941 -148293591 + L1MCc LINE L1 2105 2235 -4887 748 248 124 11 chr5 54792046 54792417 -148293115 + L1MCc LINE L1 2564 2976 -4146 2662 13 10 0 chr5 54793128 54793436 -148292096 + AluYb8 SINE Alu 1 311 -7 464 340 63 15 chr5 54794277 54794600 -148290932 + HERVL LTR ERVL 1776 2120 -3033 309 68 0 0 chr5 54794809 54794853 -148290679 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr5 54794859 54794879 -148290653 + (CA)n Simple_repeat Simple_repeat 2 21 0 1888 193 135 9 chr5 54794897 54795349 -148290183 + LTR22 LTR ERVK 1 509 0 1228 235 58 36 chr5 54795349 54795761 -148289771 - L1MA9 LINE L1 -96 6216 5796 5237 135 16 16 chr5 54796118 54797021 -148288511 + L1PA10 LINE L1 5262 6164 -4 464 262 90 0 chr5 54797750 54797895 -148287637 - MIR SINE MIR -34 228 71 207 155 56 14 chr5 54799882 54799953 -148285579 + (TA)n Simple_repeat Simple_repeat 2 75 0 24 32 0 0 chr5 54800104 54800135 -148285397 + AT_rich Low_complexity Low_complexity 1 31 0 540 56 0 0 chr5 54800135 54800206 -148285326 - L1PA6 LINE L1 -6 6148 6078 35 0 0 0 chr5 54800748 54800783 -148284749 + AT_rich Low_complexity Low_complexity 1 35 0 502 296 82 61 chr5 54800912 54801429 -148284103 + L1MEc LINE L1 862 1407 -4989 198 71 0 0 chr5 54801429 54801457 -148284075 + (CA)n Simple_repeat Simple_repeat 1 28 0 502 296 82 61 chr5 54801457 54801828 -148283704 + L1MEc LINE L1 1407 1769 -4627 1231 283 49 47 chr5 54801851 54802940 -148282592 + L1MEc LINE L1 1849 2894 -3321 309 109 0 0 chr5 54803372 54803418 -148282114 + (TG)n Simple_repeat Simple_repeat 1 46 0 411 222 28 23 chr5 54803945 54804121 -148281411 + (TA)n Simple_repeat Simple_repeat 2 178 0 252 319 18 18 chr5 54804408 54804571 -148280961 + CT-rich Low_complexity Low_complexity 1 163 0 207 228 24 31 chr5 54804585 54804712 -148280820 + CT-rich Low_complexity Low_complexity 1 126 0 21 0 0 0 chr5 54805021 54805042 -148280490 + AT_rich Low_complexity Low_complexity 1 21 0 1430 174 52 11 chr5 54805318 54805698 -148279834 + AluJb SINE Alu 1 391 0 746 259 25 15 chr5 54806046 54806247 -148279285 + MER58A DNA MER1_type 7 209 -15 998 345 138 8 chr5 54806446 54807105 -148278427 + L2 LINE L2 2177 2921 -393 722 265 89 22 chr5 54807234 54807604 -148277928 - LTR37B LTR ERV1 -73 395 1 429 327 27 0 chr5 54807612 54807762 -148277770 - MIR SINE MIR -106 156 3 390 365 50 21 chr5 54808159 54808441 -148277091 - L1ME4a LINE L1 -213 5908 5619 413 262 30 82 chr5 54808680 54808866 -148276666 + MLT1H1 LTR MaLR 373 555 0 237 33 0 0 chr5 54810685 54810715 -148274817 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr5 54810908 54810929 -148274603 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 54811309 54811341 -148274191 + AT_rich Low_complexity Low_complexity 1 32 0 4704 139 31 1 chr5 54811850 54812633 -148272899 - L1PA16 LINE L1 -16 6150 5345 1798 112 11 14 chr5 54812669 54812947 -148272585 - L1PA8A LINE L1 -3 6128 5852 404 58 0 0 chr5 54812969 54813021 -148272511 - MLT2A1 LTR ERVL 0 444 393 292 134 0 30 chr5 54813061 54813128 -148272404 + (TG)n Simple_repeat Simple_repeat 1 65 0 241 152 0 0 chr5 54813285 54813331 -148272201 + LTR66 LTR ERVL 394 439 -171 * 2661 95 22 5 chr5 54813327 54813694 -148271838 - MLT2A1 LTR ERVL -71 373 1 3313 253 35 2 chr5 54813694 54814729 -148270803 - L1PA16 LINE L1 -810 5336 4268 1736 199 17 11 chr5 54815592 54815954 -148269578 - MLT1A1 LTR MaLR 0 365 2 1540 168 3 99 chr5 54816146 54816528 -148269004 - MER7A DNA MER2_type 0 346 4 356 167 26 13 chr5 54816550 54816628 -148268904 + MER67C LTR ERV1 595 673 -37 1156 144 18 52 chr5 54817205 54817434 -148268098 - Tigger2a DNA MER2_type -212 222 2 9944 206 26 17 chr5 54817721 54817809 -148267723 - L1PA16 LINE L1 -2889 3257 3171 183 80 0 0 chr5 54817809 54817834 -148267698 + (TG)n Simple_repeat Simple_repeat 2 26 0 9944 206 26 17 chr5 54817834 54820038 -148265494 - L1PA16 LINE L1 -2975 3171 944 23 0 0 0 chr5 54822094 54822117 -148263415 + AT_rich Low_complexity Low_complexity 1 23 0 247 305 0 42 chr5 54822172 54822290 -148263242 - MIR SINE MIR -52 210 98 237 65 0 0 chr5 54822443 54822474 -148263058 + (CA)n Simple_repeat Simple_repeat 2 32 0 194 308 137 8 chr5 54822993 54823110 -148262422 - MIR SINE MIR 0 262 131 4816 224 6 29 chr5 54823215 54824466 -148261066 - L1 LINE L1 -1359 4787 3566 775 226 10 25 chr5 54824479 54824683 -148260849 + L1P LINE L1 3354 3554 -2592 225 0 0 0 chr5 54824717 54824742 -148260790 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1299 215 32 54 chr5 54825022 54825394 -148260138 + MLT1A1 LTR MaLR 2 365 0 1784 185 48 42 chr5 54826176 54826736 -148258796 + MLT2A2 LTR ERVL 1 554 0 32 43 0 0 chr5 54826793 54826839 -148258693 + AT_rich Low_complexity Low_complexity 1 46 0 251 274 27 0 chr5 54827142 54827215 -148258317 + L1MC4a LINE L1 6642 6716 -1092 742 276 49 28 chr5 54827241 54827527 -148258005 + L1MC4 LINE L1 6780 7071 -971 305 273 88 49 chr5 54827545 54828027 -148257505 + L1MC5 LINE L1 7130 7470 -492 3563 158 24 38 chr5 54828298 54828698 -148256834 + Tigger3b DNA MER2_type 3 392 -2636 2195 63 3 21 chr5 54828698 54829012 -148256520 - AluY SINE Alu 0 309 1 3563 158 24 38 chr5 54829012 54829317 -148256215 + Tigger3b DNA MER2_type 392 700 -531 456 118 26 0 chr5 54829321 54829397 -148256135 + AluS SINE Alu 1 78 -234 233 260 0 0 chr5 54829501 54829551 -148255981 + GA-rich Low_complexity Low_complexity 1 50 0 933 169 18 0 chr5 54831350 54831516 -148254016 - MLT1A1 LTR MaLR 0 365 197 2006 229 26 9 chr5 54831521 54831940 -148253592 - MLT2B3 LTR ERVL -128 426 1 262 253 35 46 chr5 54832251 54832338 -148253194 - MER5A DNA MER1_type -2 187 102 957 163 62 0 chr5 54833011 54833189 -148252343 + MSTA LTR MaLR 240 428 0 22 0 0 0 chr5 54833221 54833243 -148252289 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 54833823 54833865 -148251667 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 316 319 65 22 chr5 54834619 54834757 -148250775 + MIR SINE MIR 28 171 -91 1427 111 58 0 chr5 54834757 54835000 -148250532 + L1MA6 LINE L1 6038 6294 -6 454 239 181 32 chr5 54835466 54835621 -148249911 - MER5A DNA MER1_type 0 189 12 1524 159 69 39 chr5 54835959 54836323 -148249209 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr5 54836500 54836543 -148248989 + AT_rich Low_complexity Low_complexity 1 43 0 216 0 0 0 chr5 54837241 54837265 -148248267 + (A)n Simple_repeat Simple_repeat 1 24 0 2017 60 4 30 chr5 54837496 54837765 -148247767 - AluY SINE Alu -13 298 37 284 236 9 0 chr5 54837882 54837992 -148247540 + (TA)n Simple_repeat Simple_repeat 1 111 0 271 234 26 0 chr5 54837992 54838009 -148247523 + L1MC4 LINE L1 6614 6629 -1413 219 114 0 0 chr5 54838009 54838044 -148247488 + (CATA)n Simple_repeat Simple_repeat 1 35 0 271 234 26 0 chr5 54838044 54838069 -148247463 + L1MC4 LINE L1 6629 6692 -1350 * 326 267 20 0 chr5 54838045 54838146 -148247386 + (TA)n Simple_repeat Simple_repeat 2 104 0 24 0 0 0 chr5 54838308 54838332 -148247200 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 54838456 54838484 -148247048 + AT_rich Low_complexity Low_complexity 1 28 0 48 43 0 0 chr5 54838668 54838737 -148246795 + AT_rich Low_complexity Low_complexity 1 69 0 4844 190 30 12 chr5 54838882 54840012 -148245520 + L1MA7 LINE L1 5145 6290 -1 15976 84 8 6 chr5 54840265 54840644 -148244888 - HERVL LTR ERVL -292 5362 4985 2457 22 4 0 chr5 54840644 54840919 -148244613 - AluYa5 SINE Alu -9 302 27 15976 84 8 6 chr5 54840919 54843235 -148242297 - HERVL LTR ERVL -669 4985 2609 224 220 9 37 chr5 54844088 54844197 -148241335 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 908 202 6 0 chr5 54845568 54845736 -148239796 + AluJb SINE Alu 136 304 -8 210 240 0 0 chr5 54846693 54846743 -148238789 + A-rich Low_complexity Low_complexity 1 50 0 2132 79 4 4 chr5 54847878 54848158 -148237374 - AluY SINE Alu -2 309 30 2117 125 0 25 chr5 54848224 54848545 -148236987 - AluSq SINE Alu 0 313 1 2586 114 8 0 chr5 54848684 54849060 -148236472 + L1P4 LINE L1 5304 5682 -486 370 239 39 15 chr5 54849076 54849206 -148236326 - LTR37B LTR ERV1 -8 460 328 550 61 102 31 chr5 54849438 54849487 -148236045 - MLT2A1 LTR ERVL 0 444 400 257 75 25 0 chr5 54849487 54849527 -148236005 + (TG)n Simple_repeat Simple_repeat 2 42 0 550 61 102 31 chr5 54849527 54849575 -148235957 - MLT2A1 LTR ERVL -44 400 340 4305 194 28 36 chr5 54849575 54850469 -148235063 - L1MC1 LINE L1 -115 6218 5318 200 33 0 33 chr5 54850469 54850499 -148235033 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1575 171 4 4 chr5 54850503 54850772 -148234760 - AluSx SINE Alu -30 282 14 4305 194 28 36 chr5 54850772 54850867 -148234665 - L1MC1 LINE L1 -1018 5315 5233 568 140 21 0 chr5 54850967 54851060 -148234472 - HERVK22 LTR ERVK -6652 185 91 3326 84 13 4 chr5 54851134 54851587 -148233945 - LTR22A LTR ERVK -1 457 1 189 0 0 0 chr5 54851727 54851748 -148233784 + (TG)n Simple_repeat Simple_repeat 2 22 0 323 313 35 55 chr5 54852339 54852540 -148232992 - MIR3 SINE MIR 0 208 12 2036 115 4 7 chr5 54852611 54852920 -148232612 - AluSx SINE Alu 0 312 5 1034 225 0 0 chr5 54853212 54853425 -148232107 - L1PB4 LINE L1 -3 6153 5941 411 330 63 42 chr5 54853830 54854115 -148231417 - L2 LINE L2 -2 3311 3021 21 0 0 0 chr5 54854386 54854407 -148231125 + AT_rich Low_complexity Low_complexity 1 21 0 1677 152 77 37 chr5 54854775 54855098 -148230434 - MER1B DNA MER1_type 0 337 2 2630 52 0 0 chr5 54855609 54855918 -148229614 + AluY SINE Alu 2 310 -1 477 0 0 0 chr5 54857446 54857499 -148228033 + (CA)n Simple_repeat Simple_repeat 2 54 0 433 162 57 57 chr5 54857641 54857746 -148227786 + MLT1D LTR MaLR 401 505 0 1576 204 64 3 chr5 54857803 54858117 -148227415 - MSTB LTR MaLR 0 426 94 1455 124 40 12 chr5 54858153 54858403 -148227129 - L1PA13 LINE L1 -20 6143 5887 432 159 0 0 chr5 54858400 54858469 -148227063 + L1P LINE L1 4926 4994 -1152 * 382 111 0 0 chr5 54858469 54858523 -148227009 - MSTB LTR MaLR -371 55 2 2006 148 0 0 chr5 54858547 54858851 -148226681 + AluSq SINE Alu 1 304 -9 2574 116 97 5 chr5 54859244 54859648 -148225884 + MLT2A1 LTR ERVL 4 444 0 18408 104 7 20 chr5 54859648 54862341 -148223191 + HERVL-A1 LTR ERVL 1 2658 -2996 1345 248 57 55 chr5 54862557 54863032 -148222500 + MLT2B1 LTR ERVL 1 476 -44 218 315 112 66 chr5 54863057 54863254 -148222278 + L2 LINE L2 1272 1477 -1837 1319 218 26 49 chr5 54863938 54864245 -148221287 - AluJo SINE Alu -12 300 1 274 237 31 72 chr5 54864306 54864403 -148221129 + L1M4 LINE L1 16 108 -6434 * 4588 184 32 12 chr5 54864402 54865955 -148219577 - L1PA16 LINE L1 -7 6159 4575 455 274 14 94 chr5 54865964 54866176 -148219356 + L1M4 LINE L1 132 326 -6216 684 274 23 37 chr5 54866179 54866478 -148219054 - L1M4 LINE L1 -4907 1635 1341 2034 259 77 22 chr5 54866511 54867522 -148218010 + L1M4 LINE L1 4182 5248 -1396 284 358 52 36 chr5 54867954 54868261 -148217271 + HERVL LTR ERVL 3046 3357 -2297 1071 319 163 6 chr5 54869138 54869855 -148215677 - L2 LINE L2 -913 2401 1572 323 49 0 0 chr5 54870487 54870528 -148215004 + MADE1 DNA Mariner 40 80 0 290 339 39 15 chr5 54870596 54870726 -148214806 - MIR3 SINE MIR -32 176 44 929 233 150 109 chr5 54870781 54871369 -148214163 + MLT1E1 LTR MaLR 6 617 -37 2013 141 7 0 chr5 54872740 54873039 -148212493 - AluSq SINE Alu -7 306 6 367 145 0 92 chr5 54874031 54874107 -148211425 - Charlie3 DNA MER1_type -2641 69 1 1716 120 4 0 chr5 54874140 54874373 -148211159 + AluSx SINE Alu 34 267 -45 757 216 42 84 chr5 54874536 54874823 -148210709 + MER52A LTR ERV1 398 672 -1083 * 2330 214 12 0 chr5 54874817 54875248 -148210284 + MER52A LTR ERV1 1320 1755 0 597 223 137 0 chr5 54875257 54875448 -148210084 + MLT1D LTR MaLR 284 467 0 233 310 9 35 chr5 54875453 54875569 -148209963 + L1M4 LINE L1 3284 3396 -2750 640 282 29 12 chr5 54875663 54875908 -148209624 + L1MD3 LINE L1 7728 7976 -19 2127 123 0 0 chr5 54875916 54876217 -148209315 + AluSc SINE Alu 1 301 -8 370 196 44 101 chr5 54876263 54876383 -148209149 - Charlie7 DNA MER1_type -903 1709 1599 2447 71 0 0 chr5 54876383 54876694 -148208838 - AluY SINE Alu 0 311 1 370 196 44 101 chr5 54876694 54876731 -148208801 - Charlie7 DNA MER1_type -1013 1599 1561 21 36 0 0 chr5 54876803 54876831 -148208701 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr5 54876963 54876996 -148208536 + AT_rich Low_complexity Low_complexity 1 33 0 1570 207 0 17 chr5 54877081 54877194 -148208338 + AluJb SINE Alu 3 116 -196 240 35 0 0 chr5 54877194 54877223 -148208309 + (CA)n Simple_repeat Simple_repeat 2 30 0 1570 207 0 17 chr5 54877223 54877404 -148208128 + AluJb SINE Alu 116 292 -20 253 292 83 33 chr5 54878100 54878220 -148207312 - MIR SINE MIR -37 225 100 222 253 0 0 chr5 54878348 54878431 -148207101 + (TATG)n Simple_repeat Simple_repeat 2 84 0 261 134 23 64 chr5 54878453 54878624 -148206908 + (TA)n Simple_repeat Simple_repeat 1 164 0 1543 268 61 25 chr5 54879567 54880464 -148205068 + L1P3 LINE L1 1 1035 -4840 1969 226 83 37 chr5 54880609 54881576 -148203956 + L1MC4 LINE L1 4568 5562 -622 1942 142 3 29 chr5 54881576 54881887 -148203645 + AluSx SINE Alu 7 309 -3 1969 226 83 37 chr5 54881887 54882531 -148203001 + L1MC4 LINE L1 5562 6175 -9 477 367 68 21 chr5 54882784 54883258 -148202274 - L2 LINE L2 -537 2777 2282 538 281 104 37 chr5 54883621 54884083 -148201449 - Charlie2 DNA MER1_type -482 2380 1888 1363 203 20 37 chr5 54884099 54884448 -148201084 + MLT1A1 LTR MaLR 23 365 0 189 74 0 0 chr5 54884558 54884585 -148200947 + (T)n Simple_repeat Simple_repeat 1 27 0 550 333 77 38 chr5 54884973 54885364 -148200168 + L2 LINE L2 141 546 -2768 282 56 0 0 chr5 54886070 54886106 -148199426 + (GA)n Simple_repeat Simple_repeat 1 36 0 1181 296 118 16 chr5 54888106 54888792 -148196740 - L1ME3A LINE L1 -41 6129 5374 349 271 96 68 chr5 54888794 54889086 -148196446 - L1ME3A LINE L1 -1225 4921 4622 5989 192 24 18 chr5 54889087 54891383 -148194149 - L1PA16 LINE L1 -2 6164 3829 1773 146 159 26 chr5 54891475 54891853 -148193679 + MSTA LTR MaLR 1 428 0 362 340 123 8 chr5 54893180 54893415 -148192117 + MLT1I LTR MaLR 1 262 -147 701 278 67 34 chr5 54893802 54894242 -148191290 - L1M4 LINE L1 -1313 4833 4373 60 27 0 0 chr5 54894242 54894316 -148191216 + AT_rich Low_complexity Low_complexity 1 74 0 1578 197 13 20 chr5 54894494 54894799 -148190733 + AluJb SINE Alu 1 303 -9 295 373 0 0 chr5 54894882 54895000 -148190532 - HERV16 LTR ERVL -2389 3096 2979 414 257 38 9 chr5 54895074 54895179 -148190353 - HERV16 LTR ERVL -3670 1326 1219 540 278 66 26 chr5 54895208 54895435 -148190097 - HERV16 LTR ERVL -3830 1166 931 917 91 68 0 chr5 54895445 54895577 -148189955 + MSTA LTR MaLR 1 141 -287 3409 194 37 18 chr5 54895588 54896687 -148188845 - L1M2 LINE L1 -645 5667 4549 7491 129 20 0 chr5 54896719 54897848 -148187684 - THE1B-int LTR MaLR -428 1152 1 1876 178 40 9 chr5 54897850 54898199 -148187333 - THE1B LTR MaLR -2 362 3 3094 206 16 6 chr5 54898201 54898889 -148186643 - L1M4 LINE L1 -1802 4344 3650 198 103 0 0 chr5 54899517 54899546 -148185986 + (TC)n Simple_repeat Simple_repeat 2 30 0 2583 150 58 14 chr5 54899546 54900060 -148185472 - Tigger3(Golem) DNA MER2_type -2 3027 2491 1249 148 16 20 chr5 54900060 54900310 -148185222 - AluSx SINE Alu -17 295 47 2036 80 3 0 chr5 54900424 54900711 -148184821 + HERVL-A1 LTR ERVL 5367 5654 0 3014 93 40 5 chr5 54900712 54901101 -148184431 + MLT2A1 LTR ERVL 2 409 -35 491 45 15 0 chr5 54901101 54901167 -148184365 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 3014 93 40 5 chr5 54901167 54901205 -148184327 + MLT2A1 LTR ERVL 409 444 0 24 67 0 0 chr5 54901748 54901793 -148183739 + AT_rich Low_complexity Low_complexity 1 45 0 240 59 0 0 chr5 54902127 54902161 -148183371 + (TG)n Simple_repeat Simple_repeat 2 35 0 30 52 0 39 chr5 54902216 54902293 -148183239 + AT_rich Low_complexity Low_complexity 1 74 0 23 0 0 0 chr5 54902449 54902472 -148183060 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 54903073 54903098 -148182434 + AT_rich Low_complexity Low_complexity 1 25 0 245 137 39 0 chr5 54903265 54903316 -148182216 + GA-rich Low_complexity Low_complexity 4 56 0 621 185 23 23 chr5 54904239 54904369 -148181163 - MLT1H LTR MaLR -39 510 381 1354 232 133 60 chr5 54905388 54906293 -148179239 - L1M4 LINE L1 -1042 5104 4110 189 0 0 0 chr5 54906294 54906315 -148179217 + (A)n Simple_repeat Simple_repeat 1 21 0 1958 110 0 27 chr5 54906318 54906619 -148178913 + AluSx SINE Alu 3 295 -17 1260 241 26 60 chr5 54907113 54907194 -148178338 - L1M4 LINE L1 -2008 4138 4056 1378 208 115 20 chr5 54907194 54907550 -148177982 - MLT1B LTR MaLR 0 390 1 1260 241 26 60 chr5 54907550 54907965 -148177567 - L1M4 LINE L1 -2090 4056 3659 231 325 0 12 chr5 54907965 54908048 -148177484 + MLT1I LTR MaLR 1 82 -511 204 355 21 11 chr5 54909296 54909389 -148176143 - MIR SINE MIR -124 138 45 21 0 0 0 chr5 54909710 54909731 -148175801 + AT_rich Low_complexity Low_complexity 1 21 0 269 343 55 30 chr5 54910373 54910574 -148174958 + MIR SINE MIR 1 206 -56 22 0 0 0 chr5 54910707 54910729 -148174803 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 54911560 54911587 -148173945 + AT_rich Low_complexity Low_complexity 1 27 0 248 313 83 0 chr5 54911864 54911960 -148173572 + MIR SINE MIR 113 216 -46 2397 40 0 52 chr5 54912260 54912587 -148172945 + AluY SINE Alu 1 310 -1 213 135 27 0 chr5 54912865 54912902 -148172630 + GA-rich Low_complexity Low_complexity 2 39 0 610 261 137 13 chr5 54913230 54913464 -148172068 + MLT1I LTR MaLR 147 409 0 272 339 38 33 chr5 54913464 54913647 -148171885 - L2 LINE L2 -736 2578 2395 44 0 0 0 chr5 54914188 54914232 -148171300 + AT_rich Low_complexity Low_complexity 1 44 0 356 259 86 17 chr5 54915526 54915700 -148169832 - L1ME3 LINE L1 -9 6153 5968 600 277 39 17 chr5 54915723 54915954 -148169578 + L1M4 LINE L1 25 260 -6282 1367 309 59 32 chr5 54915971 54916106 -148169426 + L1M4 LINE L1 323 453 -6089 198 0 0 0 chr5 54916106 54916128 -148169404 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1367 309 59 32 chr5 54916128 54916622 -148168910 + L1M4 LINE L1 453 969 -5573 577 214 69 11 chr5 54916615 54916891 -148168641 + L1 LINE L1 3193 3557 -2589 * 680 179 0 8 chr5 54916893 54917027 -148168505 + L1MA8 LINE L1 6020 6152 -139 360 0 0 0 chr5 54917751 54917791 -148167741 + (A)n Simple_repeat Simple_repeat 1 40 0 204 320 39 13 chr5 54918433 54918511 -148167021 + L2 LINE L2 3222 3301 -12 493 225 28 49 chr5 54918627 54918769 -148166763 + MLT1A2 LTR MaLR 1 139 -226 228 122 0 0 chr5 54918850 54918891 -148166641 + (GA)n Simple_repeat Simple_repeat 2 42 0 1847 237 21 5 chr5 54918891 54919309 -148166223 + MSTB LTR MaLR 2 426 0 6565 218 46 11 chr5 54919320 54920684 -148164848 + MSTB-int LTR MaLR 6 1417 -234 1846 145 49 20 chr5 54920738 54921082 -148164450 - L1PB3 LINE L1 -2 6152 5799 242 220 0 0 chr5 54921082 54921132 -148164400 + MSTB-int LTR MaLR 1414 1463 -188 860 199 42 0 chr5 54921138 54921304 -148164228 + MSTB LTR MaLR 239 411 -15 279 0 0 0 chr5 54921313 54921344 -148164188 + (CA)n Simple_repeat Simple_repeat 2 32 0 643 272 5 21 chr5 54921347 54921538 -148163994 + MLT1A2 LTR MaLR 187 374 0 243 0 0 0 chr5 54921684 54921711 -148163821 + (A)n Simple_repeat Simple_repeat 1 27 0 507 305 149 19 chr5 54921714 54922029 -148163503 - L2 LINE L2 -774 2540 2185 406 321 119 22 chr5 54922030 54922341 -148163191 - L2 LINE L2 -1332 1982 1642 1808 127 24 3 chr5 54922375 54922667 -148162865 + AluSg SINE Alu 3 300 -10 207 100 0 0 chr5 54922668 54922698 -148162834 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 1964 61 389 162 chr5 54922700 54923274 -148162258 - LTR12 LTR ERV1 -3 711 8 183 100 0 0 chr5 54923275 54923305 -148162227 + (GGAA)n Simple_repeat Simple_repeat 4 33 0 588 314 106 16 chr5 54923305 54923608 -148161924 - L2 LINE L2 -1686 1628 1299 186 373 45 0 chr5 54923804 54923871 -148161661 + L2 LINE L2 3153 3222 -50 2549 58 0 0 chr5 54924503 54924812 -148160720 + AluY SINE Alu 1 309 -2 209 336 46 38 chr5 54924815 54925053 -148160479 + L2 LINE L2 2266 2505 -809 527 106 11 78 chr5 54925192 54925553 -148159979 + (TA)n Simple_repeat Simple_repeat 1 336 0 312 146 19 39 chr5 54925580 54925683 -148159849 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 830 232 33 30 chr5 54925764 54926110 -148159422 - L1 LINE L1 -3822 3743 3315 563 283 84 11 chr5 54926118 54926559 -148158973 + L1MB7 LINE L1 2894 3366 -2780 * 3397 255 63 34 chr5 54926547 54927124 -148158408 + L1MB7 LINE L1 3672 4231 -1953 231 36 0 0 chr5 54927124 54927152 -148158380 + (CA)n Simple_repeat Simple_repeat 2 29 0 3397 255 63 34 chr5 54927152 54929011 -148156521 + L1MB7 LINE L1 4231 6176 -8 1078 304 42 4 chr5 54929010 54929461 -148156071 - L1ME3 LINE L1 -180 5982 5515 * 304 228 97 53 chr5 54929510 54929624 -148155908 - L1MEc LINE L1 -4131 2265 2147 44 35 0 0 chr5 54930173 54930231 -148155301 + AT_rich Low_complexity Low_complexity 1 58 0 2411 64 10 10 chr5 54930326 54930637 -148154895 + AluY SINE Alu 1 311 0 1594 131 24 57 chr5 54930810 54931134 -148154398 + AluSx SINE Alu 1 314 0 252 130 0 0 chr5 54931547 54931593 -148153939 + (GA)n Simple_repeat Simple_repeat 1 46 0 2027 117 3 16 chr5 54932917 54933224 -148152308 + AluSq SINE Alu 1 303 -10 423 248 9 0 chr5 54934689 54934802 -148150730 - LTR43 LTR ERV1 -309 293 180 660 271 48 33 chr5 54935053 54935263 -148150269 - MER58A DNA MER1_type -10 214 2 1465 198 13 48 chr5 54936780 54937232 -148148300 + MLT1D LTR MaLR 1 505 0 2264 239 42 16 chr5 54937415 54937963 -148147569 - REP3 LTR ERV 0 562 1 21 0 0 0 chr5 54938972 54938993 -148146539 + AT_rich Low_complexity Low_complexity 1 21 0 2812 189 64 7 chr5 54939582 54940147 -148145385 - Tigger1 DNA MER2_type -1821 597 1 343 257 43 9 chr5 54940148 54940292 -148145240 + L1MB1 LINE L1 3048 3208 -4357 1477 207 41 32 chr5 54940352 54940695 -148144837 - MER4D LTR ERV1 -12 891 546 576 198 0 86 chr5 54940692 54940751 -148144781 - MER4E LTR ERV1 -588 284 222 * 2097 122 0 0 chr5 54940751 54941045 -148144487 + AluSg SINE Alu 1 294 -16 576 198 0 86 chr5 54941045 54941178 -148144354 - MER4E LTR ERV1 -650 222 1 6034 227 45 14 chr5 54941207 54942969 -148142563 + L1MB1 LINE L1 3281 5115 -2450 198 0 0 0 chr5 54942969 54942991 -148142541 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 6034 227 45 14 chr5 54942991 54943095 -148142437 + L1MB1 LINE L1 5115 5214 -2351 2191 161 36 5 chr5 54943198 54943615 -148141917 + L1MB1 LINE L1 6849 7278 -309 517 203 7 14 chr5 54943617 54943760 -148141772 + CT-rich Low_complexity Low_complexity 3 144 0 1495 206 0 7 chr5 54943760 54944042 -148141490 - AluJo SINE Alu -32 280 1 1515 155 73 16 chr5 54944045 54944348 -148141184 + L1MB1 LINE L1 7264 7583 -4 306 340 11 0 chr5 54945850 54945944 -148139588 + MIR3 SINE MIR 76 170 -38 2390 79 0 0 chr5 54946134 54946426 -148139106 + AluSc SINE Alu 6 297 -12 353 326 85 13 chr5 54946575 54946799 -148138733 - MIR SINE MIR -21 241 2 1552 201 27 27 chr5 54946865 54947234 -148138298 + MLT1A2 LTR MaLR 4 372 -2 297 0 0 0 chr5 54947292 54947325 -148138207 + (A)n Simple_repeat Simple_repeat 1 33 0 595 167 28 0 chr5 54947685 54947793 -148137739 + MLT1C LTR MaLR 1 111 -356 207 69 0 0 chr5 54949165 54949194 -148136338 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1561 186 29 7 chr5 54949248 54949527 -148136005 - AluJo SINE Alu -19 293 9 304 280 32 72 chr5 54949576 54949701 -148135831 - L1MB8 LINE L1 -127 6046 5920 1323 220 74 59 chr5 54949701 54950221 -148135311 + MER39 LTR ERV1 1 701 -6 751 202 46 12 chr5 54950226 54950399 -148135133 - L1ME1 LINE L1 -243 5923 5745 1023 236 11 23 chr5 54950407 54950669 -148134863 + MLT1E1 LTR MaLR 389 497 -8 439 319 78 53 chr5 54950720 54951155 -148134377 - L2 LINE L2 -351 2963 2518 1921 158 106 35 chr5 54953148 54953357 -148132175 - L1MB7 LINE L1 -59 6125 5932 2028 111 93 35 chr5 54953357 54953701 -148131831 + THE1B LTR MaLR 1 364 0 1921 158 106 35 chr5 54953701 54953946 -148131586 - L1MB7 LINE L1 -252 5932 5639 2086 191 115 11 chr5 54954069 54954531 -148131001 - MLT2B1 LTR ERVL -10 510 1 22 56 0 0 chr5 54954764 54954800 -148130732 + AT_rich Low_complexity Low_complexity 1 36 0 740 311 31 4 chr5 54954858 54955083 -148130449 + MIR SINE MIR 19 249 -13 27 92 0 0 chr5 54956844 54956920 -148128612 + AT_rich Low_complexity Low_complexity 1 76 0 234 0 0 0 chr5 54956964 54956990 -148128542 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 279 361 0 0 chr5 54956991 54957063 -148128469 - L2 LINE L2 -15 3257 3186 2558 271 82 77 chr5 54957067 54957146 -148128386 - L2 LINE L2 -12 3301 3224 2265 88 3 0 chr5 54957146 54957452 -148128080 + AluY SINE Alu 3 309 -2 2558 271 82 77 chr5 54957452 54957591 -148127941 - L2 LINE L2 -89 3224 3087 333 0 0 0 chr5 54957591 54957628 -148127904 + (TG)n Simple_repeat Simple_repeat 1 37 0 2558 271 82 77 chr5 54957628 54958988 -148126544 - L2 LINE L2 -226 3087 1716 637 179 43 0 chr5 54959543 54959660 -148125872 + MLT1C LTR MaLR 1 122 -345 1981 78 63 0 chr5 54959660 54959931 -148125601 + AluSq SINE Alu 1 288 -25 273 247 0 62 chr5 54959938 54960002 -148125530 + L1MB5 LINE L1 3445 3503 -2643 1997 154 0 7 chr5 54960002 54960301 -148125231 + AluJb SINE Alu 3 299 -13 273 247 0 62 chr5 54960301 54960333 -148125199 + L1MB5 LINE L1 3503 3535 -2611 5473 205 91 44 chr5 54960344 54961022 -148124510 + L1MB5 LINE L1 3837 4482 -1692 1672 166 37 64 chr5 54961022 54961396 -148124136 - MLT1A1 LTR MaLR 0 365 2 5473 205 91 44 chr5 54961396 54962336 -148123196 + L1MB5 LINE L1 4482 5589 -585 2447 74 0 6 chr5 54962336 54962648 -148122884 + AluY SINE Alu 1 310 -1 5473 205 91 44 chr5 54962648 54963239 -148122293 + L1MB5 LINE L1 5589 6151 -23 23 68 0 0 chr5 54964091 54964135 -148121397 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 54966528 54966549 -148118983 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 54967077 54967108 -148118424 + AT_rich Low_complexity Low_complexity 1 31 0 894 286 5 5 chr5 54969618 54969835 -148115697 + MIR SINE MIR 43 259 -3 189 339 118 39 chr5 54969932 54970059 -148115473 + MIR3 SINE MIR 24 160 -48 217 293 53 0 chr5 54970062 54970137 -148115395 - MIR3 SINE MIR -6 202 124 23 33 0 0 chr5 54971797 54971827 -148113705 + AT_rich Low_complexity Low_complexity 1 30 0 319 246 201 0 chr5 54972127 54972261 -148113271 - LTR33 LTR ERVL -348 173 13 420 206 11 56 chr5 54972720 54972900 -148112632 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 238 152 61 45 chr5 54973096 54973162 -148112370 + L1MC4 LINE L1 6637 6703 -1339 285 279 0 15 chr5 54973162 54973298 -148112234 + (TA)n Simple_repeat Simple_repeat 2 135 0 379 313 216 19 chr5 54973397 54973768 -148111764 - L2 LINE L2 -47 3266 2823 1357 287 121 29 chr5 54973782 54974403 -148111129 - L2 LINE L2 -640 2674 1997 1716 182 0 13 chr5 54974403 54974710 -148110822 + AluJo SINE Alu 1 303 -9 210 234 0 0 chr5 54975876 54975923 -148109609 - MIR SINE MIR -119 143 97 337 290 28 15 chr5 54976089 54976250 -148109282 - MER5A DNA MER1_type -8 170 7 393 297 39 14 chr5 54977657 54977878 -148107654 - MLT1K LTR MaLR -290 298 3 1393 82 13 69 chr5 54978404 54978637 -148106895 - L1MA2 LINE L1 0 6304 6085 398 116 21 21 chr5 54979308 54979403 -148106129 + (TA)n Simple_repeat Simple_repeat 2 96 0 264 224 0 0 chr5 54979439 54979506 -148106026 + (TA)n Simple_repeat Simple_repeat 1 67 0 331 319 0 0 chr5 54979508 54979599 -148105933 + L1MC4 LINE L1 6613 6703 -1339 1261 124 101 0 chr5 54979759 54979968 -148105564 + MER30 DNA MER1_type 1 230 0 22 35 0 0 chr5 54980210 54980239 -148105293 + AT_rich Low_complexity Low_complexity 1 29 0 235 259 0 0 chr5 54980811 54980865 -148104667 + (TA)n Simple_repeat Simple_repeat 2 55 0 829 195 23 17 chr5 54982119 54982293 -148103239 + MER5A DNA MER1_type 9 183 -6 1384 183 10 35 chr5 54982938 54983228 -148102304 + AluJb SINE Alu 26 308 -4 2050 108 10 3 chr5 54986076 54986382 -148099150 - AluSg SINE Alu -2 308 1 1111 109 31 57 chr5 54986674 54986903 -148098629 + L1MA2 LINE L1 6082 6304 0 387 206 103 137 chr5 54987023 54987227 -148098305 + MER112 DNA MER1_type 9 205 -55 296 157 39 0 chr5 54988144 54988195 -148097337 + L2 LINE L2 3250 3302 -11 1376 164 35 12 chr5 54988565 54988888 -148096644 - MER33 DNA MER1_type -6 318 1 394 269 181 19 chr5 54989567 54989727 -148095805 - MER5A DNA MER1_type 0 189 4 389 246 40 146 chr5 54989737 54989936 -148095596 + MER5B DNA MER1_type 1 178 0 2206 128 13 36 chr5 54990372 54990756 -148094776 - L1MA7 LINE L1 -141 6150 5776 498 155 10 10 chr5 54990756 54990857 -148094675 + L1MA7 LINE L1 6184 6286 -5 2096 112 3 14 chr5 54990862 54991144 -148094388 + AluSx SINE Alu 1 301 -11 181 77 0 0 chr5 54991144 54991170 -148094362 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 2096 112 3 14 chr5 54991170 54991182 -148094350 + AluSx SINE Alu 301 312 0 24 0 0 0 chr5 54991816 54991840 -148093692 + AT_rich Low_complexity Low_complexity 1 24 0 210 118 0 0 chr5 54992647 54992681 -148092851 + (GA)n Simple_repeat Simple_repeat 2 35 0 29 60 0 0 chr5 54995004 54995054 -148090478 + AT_rich Low_complexity Low_complexity 1 50 0 1443 196 12 4 chr5 54995057 54995312 -148090220 + AluJb SINE Alu 33 289 -23 285 118 0 0 chr5 54995314 54995365 -148090167 + (CA)n Simple_repeat Simple_repeat 1 51 0 267 31 0 0 chr5 54995782 54995814 -148089718 + (TA)n Simple_repeat Simple_repeat 2 33 0 518 291 109 9 chr5 54995893 54996113 -148089419 - MIR SINE MIR -1 261 20 357 241 0 12 chr5 54996176 54996259 -148089273 + MIR SINE MIR 73 154 -108 245 111 0 0 chr5 54996954 54996990 -148088542 + U2 snRNA snRNA 1 36 -152 415 363 131 29 chr5 54997728 54998042 -148087490 - L2 LINE L2 0 3272 2927 1050 175 0 0 chr5 54998113 54998279 -148087253 + FRAM SINE Alu 1 163 -13 189 356 75 21 chr5 54998795 54999034 -148086498 - L2 LINE L2 -1121 2193 1942 423 307 235 0 chr5 54999903 55000056 -148085476 - MER5A DNA MER1_type 0 189 1 194 329 82 43 chr5 55000400 55000607 -148084925 - L2 LINE L2 -1605 1709 1495 1685 176 34 3 chr5 55000733 55001056 -148084476 - MSTB LTR MaLR -93 333 1 343 261 122 6 chr5 55001188 55001368 -148084164 + LTR33A LTR ERVL 323 523 0 249 119 0 0 chr5 55001994 55002036 -148083496 + (TG)n Simple_repeat Simple_repeat 1 42 0 729 125 44 0 chr5 55002621 55002757 -148082775 + L1MA3 LINE L1 6164 6305 0 2135 187 83 53 chr5 55004579 55005179 -148080353 - MLT1E3 LTR MaLR -1 623 6 273 250 28 14 chr5 55006426 55006498 -148079034 + GA-rich Low_complexity Low_complexity 3 75 0 2004 148 3 0 chr5 55007167 55007478 -148078054 - AluSx SINE Alu 0 312 1 1878 200 104 40 chr5 55007660 55008189 -148077343 - MLT1F1 LTR MaLR -4 563 1 21 0 0 0 chr5 55008418 55008439 -148077093 + AT_rich Low_complexity Low_complexity 1 21 0 277 322 58 16 chr5 55010744 55010865 -148074667 + L2 LINE L2 3178 3303 -10 297 430 49 0 chr5 55011247 55011389 -148074143 + L2 LINE L2 3087 3235 -37 1169 148 74 40 chr5 55012181 55012550 -148072982 - MLT1C LTR MaLR 0 390 21 3108 111 126 0 chr5 55012705 55013173 -148072359 - MER1A DNA MER1_type 0 527 1 546 231 39 8 chr5 55013416 55013546 -148071986 + MIR SINE MIR 109 242 -20 437 286 40 16 chr5 55015661 55015787 -148069745 + MIR SINE MIR 16 144 -64 369 43 0 0 chr5 55017643 55017690 -148067842 + (TG)n Simple_repeat Simple_repeat 2 48 0 2213 198 79 13 chr5 55018133 55018654 -148066878 - MER119 DNA MER1_type 0 583 29 269 267 0 0 chr5 55019175 55019250 -148066282 + HAL1 LINE L1 968 1042 -1465 219 139 0 0 chr5 55019505 55019541 -148065991 + (CA)n Simple_repeat Simple_repeat 1 36 0 1521 189 22 31 chr5 55019546 55019901 -148065631 + MLT1A1 LTR MaLR 14 365 0 366 188 38 0 chr5 55021174 55021254 -148064278 - MIR SINE MIR -27 235 153 1835 129 32 0 chr5 55021697 55021811 -148063721 + AluSq SINE Alu 1 110 -203 237 65 0 0 chr5 55021811 55021842 -148063690 + (CTAAA)n Simple_repeat Simple_repeat 5 35 0 1835 129 32 0 chr5 55021842 55022006 -148063526 + AluSq SINE Alu 110 288 -25 2227 95 0 3 chr5 55022227 55022559 -148062973 - AluSq SINE Alu 0 331 1 279 173 0 0 chr5 55022656 55022708 -148062824 + (TA)n Simple_repeat Simple_repeat 1 52 0 226 71 24 24 chr5 55026087 55026129 -148059403 + (TG)n Simple_repeat Simple_repeat 2 43 0 267 295 0 13 chr5 55027032 55027110 -148058422 + GA-rich Low_complexity Low_complexity 2 78 0 432 0 0 0 chr5 55028090 55028175 -148057357 + (CA)n Simple_repeat Simple_repeat 1 133 0 432 0 0 0 chr5 55028175 55028223 -148057309 + (CA)n Simple_repeat Simple_repeat 2 49 0 216 261 0 0 chr5 55029393 55029462 -148056070 + T-rich Low_complexity Low_complexity 1 69 0 207 139 0 0 chr5 55030154 55030190 -148055342 + (TG)n Simple_repeat Simple_repeat 2 37 0 504 0 0 0 chr5 55031721 55031777 -148053755 + (CA)n Simple_repeat Simple_repeat 2 57 0 24 32 0 0 chr5 55032141 55032172 -148053360 + AT_rich Low_complexity Low_complexity 1 31 0 260 327 18 0 chr5 55032237 55032346 -148053186 + MIR3 SINE MIR 74 185 -23 362 70 18 0 chr5 55032713 55032770 -148052762 + AluSp/q SINE Alu 241 298 -5 2036 106 11 3 chr5 55033863 55034146 -148051386 + AluSq SINE Alu 29 313 0 204 118 29 0 chr5 55034146 55034180 -148051352 + GA-rich Low_complexity Low_complexity 2 36 0 1605 192 0 10 chr5 55037496 55037787 -148047745 + AluJo SINE Alu 11 298 -14 210 37 0 0 chr5 55037787 55037814 -148047718 + (TA)n Simple_repeat Simple_repeat 2 28 0 195 42 0 0 chr5 55037813 55037837 -148047695 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 871 287 13 4 chr5 55037952 55038182 -148047350 + MIR SINE MIR 2 233 -29 417 265 52 133 chr5 55038184 55038508 -148047024 + L2 LINE L2 2980 3277 -36 376 271 45 38 chr5 55038743 55038876 -148046656 - MIR SINE MIR -72 190 57 2089 120 32 112 chr5 55039418 55039692 -148045840 - MER4E LTR ERV1 -28 738 444 1885 88 72 0 chr5 55039692 55039954 -148045578 + AluSc SINE Alu 1 281 -28 270 0 0 0 chr5 55039954 55039984 -148045548 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2089 120 32 112 chr5 55039984 55040324 -148045208 - MER4E LTR ERV1 -320 446 1 1509 84 56 0 chr5 55040666 55040880 -148044652 - L1PA11 LINE L1 0 6174 5949 371 161 81 0 chr5 55040965 55041052 -148044480 + AluJ/FRAM SINE Alu 225 299 -3 515 121 0 11 chr5 55041054 55041145 -148044387 + (GGGGA)n Simple_repeat Simple_repeat 1 90 0 1626 193 112 42 chr5 55041214 55041757 -148043775 + MLT1G LTR MaLR 3 583 -7 273 306 70 54 chr5 55041961 55042147 -148043385 + MLT1J LTR MaLR 111 299 -212 389 230 44 44 chr5 55042358 55042493 -148043039 + MLT1J LTR MaLR 329 463 -48 267 327 113 40 chr5 55043668 55043916 -148041616 - L2 LINE L2 0 3313 3048 1889 216 46 63 chr5 55044189 55044792 -148040740 + MER7C DNA MER2_type 8 600 -2 216 338 62 0 chr5 55045773 55045853 -148039679 + MER91C DNA MER1_type 31 115 -25 2713 32 0 0 chr5 55047592 55047903 -148037629 - AluYb8 SINE Alu -7 311 1 1411 127 12 36 chr5 55049546 55049799 -148035733 + MER50 LTR ERV1 2 248 -486 * 1702 129 45 26 chr5 55049793 55050102 -148035430 + MER50 LTR ERV1 397 711 -23 2179 118 7 0 chr5 55050686 55050982 -148034550 + AluSq SINE Alu 3 300 -13 328 309 16 24 chr5 55051209 55051332 -148034200 + MIR3 SINE MIR 69 190 -18 2103 95 11 3 chr5 55053789 55054119 -148031413 + AluSq SINE Alu 29 360 0 1704 195 0 3 chr5 55057434 55057732 -148027800 + AluJo SINE Alu 11 307 -5 195 42 0 0 chr5 55057745 55057769 -148027763 + (CA)n Simple_repeat Simple_repeat 2 25 0 871 287 13 4 chr5 55057884 55058114 -148027418 + MIR SINE MIR 2 233 -29 431 262 52 133 chr5 55058116 55058440 -148027092 + L2 LINE L2 2980 3277 -36 376 271 45 38 chr5 55058675 55058808 -148026724 - MIR SINE MIR -72 190 57 2045 121 37 111 chr5 55059349 55059623 -148025909 - MER4E LTR ERV1 -28 738 445 1885 88 72 0 chr5 55059623 55059885 -148025647 + AluSc SINE Alu 1 281 -28 324 0 0 0 chr5 55059885 55059921 -148025611 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 2045 121 37 111 chr5 55059921 55060258 -148025274 - MER4E LTR ERV1 -319 447 1 1494 84 56 0 chr5 55060600 55060814 -148024718 - L1PA11 LINE L1 0 6174 5949 371 161 81 0 chr5 55060899 55060986 -148024546 + AluJ/FRAM SINE Alu 225 299 -3 660 124 0 0 chr5 55060988 55061093 -148024439 + (GGGGA)n Simple_repeat Simple_repeat 1 105 0 206 77 0 0 chr5 55061093 55061119 -148024413 + (GAGAA)n Simple_repeat Simple_repeat 5 30 0 1626 193 112 42 chr5 55061151 55061694 -148023838 + MLT1G LTR MaLR 3 583 -7 273 306 70 54 chr5 55061883 55062069 -148023463 + MLT1J LTR MaLR 111 299 -212 389 230 44 44 chr5 55062280 55062415 -148023117 + MLT1J LTR MaLR 329 463 -48 282 323 113 40 chr5 55063590 55063838 -148021694 - L2 LINE L2 0 3313 3048 1874 217 46 63 chr5 55064111 55064714 -148020818 + MER7C DNA MER2_type 8 600 -2 216 338 62 0 chr5 55065697 55065777 -148019755 + MER91C DNA MER1_type 31 115 -25 2834 16 0 0 chr5 55067516 55067827 -148017705 - AluYb8 SINE Alu -7 311 1 230 200 0 0 chr5 55067866 55067910 -148017622 + MSTD LTR MaLR 1 44 -352 2192 171 29 12 chr5 55067910 55068324 -148017208 - MSTB LTR MaLR 0 426 6 6782 174 30 55 chr5 55068339 55069829 -148015703 - MSTB-int LTR MaLR -13 1638 187 12499 178 17 10 chr5 55069847 55071103 -148014429 - L1PB2 LINE L1 -3 6864 5617 1828 123 32 42 chr5 55071103 55071412 -148014120 - AluSq SINE Alu 0 306 1 12499 178 17 10 chr5 55071412 55072314 -148013218 - L1PB2 LINE L1 -1250 5617 4722 1756 122 76 62 chr5 55072314 55072683 -148012849 - THE1C LTR MaLR -1 374 1 12499 178 17 10 chr5 55072683 55074265 -148011267 - L1PB2 LINE L1 -2145 4722 3095 7827 198 10 20 chr5 55074269 55076557 -148008975 - L1PB2 LINE L1 -5219 1644 3 1015 185 0 0 chr5 55076574 55076769 -148008763 - MSTB-int LTR MaLR -1456 195 1 2402 152 21 21 chr5 55076773 55077195 -148008337 - MSTB LTR MaLR -4 422 1 1451 168 139 9 chr5 55077195 55077511 -148008021 + MSTD LTR MaLR 40 396 0 24 53 0 0 chr5 55077536 55077574 -148007958 + AT_rich Low_complexity Low_complexity 1 38 0 1779 176 79 5 chr5 55079195 55079575 -148005957 + MSTB1 LTR MaLR 1 408 -24 1704 160 34 7 chr5 55079601 55079870 -148005662 - AluJb SINE Alu -36 276 1 416 345 42 12 chr5 55080618 55080786 -148004746 - MIR SINE MIR -86 176 4 248 290 0 0 chr5 55082688 55082757 -148002775 - L3 LINE CR1 -14 1563 1495 939 364 101 15 chr5 55082759 55083540 -148001992 + L2 LINE L2 1882 2729 -585 203 175 0 0 chr5 55083590 55083630 -148001902 + A-rich Low_complexity Low_complexity 2 41 0 774 165 0 0 chr5 55083740 55083873 -148001659 - FLAM_C SINE Alu 0 133 1 4920 163 53 4 chr5 55086116 55087321 -147998211 - L1MA9 LINE L1 -10 6302 5042 288 0 0 0 chr5 55087323 55087355 -147998177 + (T)n Simple_repeat Simple_repeat 1 32 0 8598 189 40 25 chr5 55087361 55087899 -147997633 - L1MA9 LINE L1 -1073 5073 4545 2447 127 19 28 chr5 55087899 55088323 -147997209 - L1MA2 LINE L1 0 6304 5885 8598 189 40 25 chr5 55088323 55089969 -147995563 - L1MA9 LINE L1 -1601 4545 2856 33 0 0 0 chr5 55090180 55090213 -147995319 + AT_rich Low_complexity Low_complexity 1 33 0 240 244 33 11 chr5 55091144 55091234 -147994298 - MER81 DNA DNA -21 93 2 300 302 151 73 chr5 55091913 55092257 -147993275 - L1MDb LINE L1 -5643 766 396 181 243 75 47 chr5 55092677 55092784 -147992748 + L2 LINE L2 3006 3115 -157 2061 122 10 0 chr5 55093884 55094187 -147991345 - AluSq SINE Alu -7 306 1 2114 131 0 13 chr5 55094217 55094530 -147991002 + AluSg1 SINE Alu 1 309 0 2438 97 6 0 chr5 55094659 55094970 -147990562 - AluSq SINE Alu 0 313 1 209 382 53 27 chr5 55095724 55095949 -147989583 + MIR SINE MIR 20 250 -12 1743 225 73 64 chr5 55095974 55096612 -147988920 - L1ME2 LINE L1 -9 6155 5524 2190 113 0 0 chr5 55096612 55096913 -147988619 - AluSc SINE Alu -8 301 1 1743 225 73 64 chr5 55096913 55096984 -147988548 - L1ME2 LINE L1 -640 5524 5455 14084 142 25 10 chr5 55096984 55099364 -147986168 + Tigger1 DNA MER2_type 2 2418 0 1743 225 73 64 chr5 55099364 55099808 -147985724 - L1ME2 LINE L1 -709 5455 5032 2274 115 0 0 chr5 55099808 55100113 -147985419 - AluSg SINE Alu -5 305 1 1743 225 73 64 chr5 55100113 55100165 -147985367 - L1ME2 LINE L1 -1132 5032 4982 1622 188 3 3 chr5 55100177 55100489 -147985043 + AluJb SINE Alu 3 314 0 1105 129 0 0 chr5 55100836 55101007 -147984525 + Tigger1 DNA MER2_type 1943 2113 -305 2078 184 18 55 chr5 55101488 55101928 -147983604 - MSTB LTR MaLR 0 426 3 21 36 0 0 chr5 55102790 55102818 -147982714 + AT_rich Low_complexity Low_complexity 1 28 0 816 257 11 0 chr5 55102850 55103033 -147982499 - MIR SINE MIR 0 262 78 301 114 0 0 chr5 55103043 55103087 -147982445 + Alu SINE Alu 1 44 -258 1346 101 6 0 chr5 55103098 55103277 -147982255 + AluSg/x SINE Alu 127 306 -4 296 339 24 16 chr5 55103375 55103499 -147982033 - MIR SINE MIR -132 130 6 1678 130 89 43 chr5 55104093 55104335 -147981197 - MER1B DNA MER1_type -2373 339 77 2057 87 31 107 chr5 55104335 55104727 -147980805 - THE1B LTR MaLR -2 362 1 1678 130 89 43 chr5 55104727 55104808 -147980724 - MER1B DNA MER1_type -2635 77 1 207 337 50 20 chr5 55105543 55105644 -147979888 + MIR SINE MIR 104 207 -55 23 33 0 0 chr5 55105661 55105691 -147979841 + AT_rich Low_complexity Low_complexity 1 30 0 355 112 0 33 chr5 55105827 55105887 -147979645 - MLT1C LTR MaLR 0 467 308 1409 216 46 39 chr5 55105943 55106238 -147979294 - MLT1C LTR MaLR -51 416 116 2372 70 0 13 chr5 55106238 55106539 -147978993 - AluSc SINE Alu -12 297 1 1409 216 46 39 chr5 55106539 55106656 -147978876 - MLT1C LTR MaLR -351 116 1 2465 269 95 77 chr5 55107212 55107245 -147978287 + L2 LINE L2 1716 1747 -1566 189 0 0 0 chr5 55107245 55107266 -147978266 + (TTTTC)n Simple_repeat Simple_repeat 3 23 0 2465 269 95 77 chr5 55107266 55108572 -147976960 + L2 LINE L2 1747 3027 -286 261 0 0 0 chr5 55108572 55108601 -147976931 + (CA)n Simple_repeat Simple_repeat 1 29 0 2465 269 95 77 chr5 55108601 55108740 -147976792 + L2 LINE L2 3027 3162 -151 2358 85 0 0 chr5 55108740 55109047 -147976485 - AluY SINE Alu -2 309 3 2465 269 95 77 chr5 55109047 55109126 -147976406 + L2 LINE L2 3162 3301 -12 274 361 0 0 chr5 55109130 55109202 -147976330 + L2 LINE L2 3186 3257 -15 201 39 0 0 chr5 55109203 55109229 -147976303 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 27 92 0 0 chr5 55109273 55109349 -147976183 + AT_rich Low_complexity Low_complexity 1 76 0 714 311 31 4 chr5 55111111 55111336 -147974196 - MIR SINE MIR -13 249 19 22 56 0 0 chr5 55111394 55111430 -147974102 + AT_rich Low_complexity Low_complexity 1 36 0 1930 191 115 11 chr5 55111663 55112125 -147973407 + MLT2B1 LTR ERVL 1 510 -10 1784 158 106 35 chr5 55112248 55112493 -147973039 + L1MB7 LINE L1 5639 5865 -319 2058 111 93 35 chr5 55112493 55112837 -147972695 - THE1B LTR MaLR 0 364 1 1784 158 106 35 chr5 55112837 55113046 -147972486 + L1MB7 LINE L1 5865 6125 -59 195 318 254 4 chr5 55114330 55114582 -147970950 + L2 LINE L2 1698 2012 -1302 483 323 78 51 chr5 55115040 55115474 -147970058 + L2 LINE L2 2518 2963 -351 936 256 16 16 chr5 55115537 55115787 -147969745 - MLT1E1 LTR MaLR -16 638 389 689 202 46 12 chr5 55115795 55115968 -147969564 + L1ME1 LINE L1 5745 5923 -243 1178 219 56 61 chr5 55115973 55116434 -147969098 - MER39 LTR ERV1 -6 701 243 267 189 278 11 chr5 55116403 55116493 -147969039 - MER34 LTR ERV1 -428 114 1 * 304 280 32 72 chr5 55116493 55116618 -147968914 + L1MB8 LINE L1 5920 6046 -127 1648 187 29 4 chr5 55116667 55116945 -147968587 + AluJo SINE Alu 9 293 -19 207 69 0 0 chr5 55117000 55117029 -147968503 + (GAA)n Simple_repeat Simple_repeat 2 30 0 558 167 28 0 chr5 55118400 55118508 -147967024 - MLT1C LTR MaLR -356 111 1 22 0 0 0 chr5 55118733 55118755 -147966777 + AT_rich Low_complexity Low_complexity 1 22 0 306 0 0 0 chr5 55118868 55118902 -147966630 + (T)n Simple_repeat Simple_repeat 1 34 0 1600 193 30 27 chr5 55118960 55119328 -147966204 - MLT1A2 LTR MaLR -2 372 4 342 326 85 13 chr5 55119394 55119618 -147965914 + MIR SINE MIR 2 241 -21 2431 81 3 0 chr5 55119767 55120063 -147965469 - AluSc SINE Alu -12 297 1 296 340 11 0 chr5 55120249 55120343 -147965189 - MIR3 SINE MIR -38 170 76 1494 155 73 16 chr5 55121814 55122117 -147963415 - L1MB1 LINE L1 -4 6164 5845 1554 224 0 6 chr5 55122120 55122433 -147963099 + AluJo SINE Alu 1 311 -1 355 214 9 18 chr5 55122433 55122545 -147962987 + GA-rich Low_complexity Low_complexity 4 114 0 2720 164 19 11 chr5 55122547 55123043 -147962489 - L1MB1 LINE L1 -309 5859 5357 1861 174 27 21 chr5 55123043 55123416 -147962116 + THE1C LTR MaLR 1 375 0 2720 164 19 11 chr5 55123416 55123454 -147962078 - L1MB1 LINE L1 -811 5357 5321 1696 212 110 40 chr5 55123453 55124033 -147961499 + L1MB1 LINE L1 4710 5330 -816 * 4063 143 19 21 chr5 55124097 55124844 -147960688 + Tigger2 DNA MER2_type 1 745 -1973 1414 135 30 0 chr5 55124920 55125157 -147960375 + Tigger2 DNA MER2_type 2465 2708 -10 252 103 39 77 chr5 55125173 55125251 -147960281 - L1MA10 LINE L1 0 6334 6260 * 1026 303 36 26 chr5 55125228 55125885 -147959647 + HAL1 LINE L1 995 1658 -849 982 150 87 71 chr5 55125883 55126137 -147959395 + L1MA10 LINE L1 6041 6298 -36 * 512 318 75 52 chr5 55127976 55128579 -147956953 + L2 LINE L2 2689 3306 -7 1546 185 0 21 chr5 55128772 55129093 -147956439 + AluJo SINE Alu 1 315 0 207 385 0 0 chr5 55129153 55129236 -147956296 - L2 LINE L2 -189 3083 3001 2084 135 36 30 chr5 55129780 55130142 -147955390 - THE1B LTR MaLR 0 364 1 262 363 41 41 chr5 55130371 55130542 -147954990 - MIR SINE MIR -76 186 16 22 0 0 0 chr5 55130747 55130769 -147954763 + AT_rich Low_complexity Low_complexity 1 22 0 276 339 0 48 chr5 55130835 55130939 -147954593 - MIR SINE MIR -64 144 54 327 238 259 0 chr5 55131857 55132004 -147953528 + MIR SINE MIR 29 213 -49 328 309 16 24 chr5 55133366 55133489 -147952043 - MIR3 SINE MIR -18 190 69 2179 118 7 0 chr5 55133716 55134012 -147951520 - AluSq SINE Alu -13 300 3 1702 129 45 26 chr5 55134596 55134905 -147950627 - MER50 LTR ERV1 -23 711 397 1411 127 12 36 chr5 55134899 55135152 -147950380 - MER50 LTR ERV1 -486 248 2 * 2849 3 0 0 chr5 55136794 55137102 -147948430 + AluYa8 SINE Alu 1 308 -2 21 36 0 0 chr5 55137762 55137790 -147947742 + AT_rich Low_complexity Low_complexity 1 28 0 7412 37 0 1 chr5 55138374 55139265 -147946267 + L1PA4 LINE L1 5254 6143 -12 24 0 0 0 chr5 55139270 55139294 -147946238 + AT_rich Low_complexity Low_complexity 1 24 0 858 320 78 48 chr5 55139469 55140288 -147945244 - L2 LINE L2 -44 3269 2434 1840 176 40 11 chr5 55140596 55140949 -147944583 + MLT1A1 LTR MaLR 1 363 -2 1427 237 51 13 chr5 55140991 55141384 -147944148 - MER119 DNA MER1_type -173 410 3 672 262 51 38 chr5 55141899 55142136 -147943396 + MIR SINE MIR 22 261 -1 1844 162 93 31 chr5 55143601 55143948 -147941584 + MLT2D LTR ERVL 3 378 -36 318 50 0 0 chr5 55143948 55143988 -147941544 + (CA)n Simple_repeat Simple_repeat 2 41 0 1844 162 93 31 chr5 55143988 55144028 -147941504 + MLT2D LTR ERVL 378 414 0 185 326 0 0 chr5 55146211 55146260 -147939272 + MIR SINE MIR 100 148 -60 1675 198 45 58 chr5 55147405 55147935 -147937597 - Charlie1b DNA MER1_type 0 523 1 207 273 0 0 chr5 55148987 55149042 -147936490 + A-rich Low_complexity Low_complexity 3 57 0 225 277 46 15 chr5 55149814 55149879 -147935653 + MIR SINE MIR 36 102 -106 275 0 29 0 chr5 55150447 55150482 -147935050 + (TG)n Simple_repeat Simple_repeat 2 37 0 2305 75 0 0 chr5 55151629 55151910 -147933622 + AluY SINE Alu 21 301 -10 5547 207 183 30 chr5 55153040 55154754 -147930778 + L1MDa LINE L1 9 1984 -4556 2208 103 10 0 chr5 55156483 55156775 -147928757 + AluSx SINE Alu 1 295 -17 211 250 0 0 chr5 55156821 55156861 -147928671 - L2 LINE L2 -37 3276 3237 711 268 81 89 chr5 55156867 55157371 -147928161 - LTR33A LTR ERVL -17 506 7 535 344 27 11 chr5 55158279 55158465 -147927067 + MIR SINE MIR 46 234 -28 223 234 43 53 chr5 55158499 55158593 -147926939 + L2 LINE L2 3148 3240 -32 220 308 96 19 chr5 55159200 55159304 -147926228 - L2 LINE L2 -6 3266 3155 231 310 51 63 chr5 55159648 55159903 -147925629 - L2 LINE L2 -217 3055 2804 192 297 127 17 chr5 55161602 55161720 -147923812 - L2 LINE L2 -1 3312 3182 457 227 119 87 chr5 55164490 55164825 -147920707 - L2 LINE L2 -354 2960 2615 245 349 53 43 chr5 55165097 55165398 -147920134 - L2 LINE L2 -787 2527 2224 189 0 0 0 chr5 55165523 55165544 -147919988 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 405 0 0 0 chr5 55165543 55165588 -147919944 + (CA)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 55169337 55169359 -147916173 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 55171198 55171228 -147914304 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr5 55171562 55171609 -147913923 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr5 55172411 55172449 -147913083 + AT_rich Low_complexity Low_complexity 1 38 0 347 248 37 0 chr5 55174263 55174372 -147911160 - MER112 DNA MER1_type 0 260 148 335 191 0 11 chr5 55174843 55174937 -147910595 + GA-rich Low_complexity Low_complexity 2 94 0 484 137 0 14 chr5 55175513 55175586 -147909946 + FLAM SINE Alu 51 122 -21 384 282 21 14 chr5 55177912 55178054 -147907478 + LTR33 LTR ERVL 1 143 -378 319 306 91 21 chr5 55178067 55178253 -147907279 + LTR33 LTR ERVL 323 521 0 2081 128 20 0 chr5 55179026 55179330 -147906202 - AluSx SINE Alu -2 310 1 21 36 0 0 chr5 55179395 55179423 -147906109 + AT_rich Low_complexity Low_complexity 1 28 0 909 268 42 48 chr5 55181204 55181559 -147903973 + L2 LINE L2 2951 3303 -10 25 0 0 0 chr5 55182041 55182066 -147903466 + AT_rich Low_complexity Low_complexity 1 25 0 234 239 0 0 chr5 55183149 55183195 -147902337 + MLT1J2 LTR MaLR 90 135 -414 * 456 235 94 13 chr5 55183181 55183382 -147902150 + MLT1H1 LTR MaLR 338 590 0 249 33 0 0 chr5 55183742 55183772 -147901760 + (CA)n Simple_repeat Simple_repeat 1 30 0 238 301 0 14 chr5 55184317 55184390 -147901142 + L2 LINE L2 3242 3313 0 23 0 0 0 chr5 55184396 55184419 -147901113 + AT_rich Low_complexity Low_complexity 1 23 0 1511 150 54 77 chr5 55185674 55185987 -147899545 - AluSx SINE Alu -2 310 5 357 289 24 54 chr5 55189847 55190013 -147895519 + MER67B LTR ERV1 1 161 -500 366 242 94 20 chr5 55190166 55190315 -147895217 + MER67A LTR ERV1 384 543 0 193 320 0 12 chr5 55190684 55190785 -147894747 - MIR SINE MIR -86 122 24 726 286 122 33 chr5 55193609 55193969 -147891563 - L2 LINE L2 -28 3285 2894 2298 93 0 13 chr5 55194848 55195161 -147890371 + AluSq SINE Alu 5 313 0 301 333 101 13 chr5 55195640 55195799 -147889733 + MLT1J2 LTR MaLR 264 436 -14 860 143 0 0 chr5 55195910 55196043 -147889489 + FLAM_C SINE Alu 1 133 0 1694 167 10 19 chr5 55196059 55196371 -147889161 + AluSx SINE Alu 1 309 -3 266 259 47 12 chr5 55197497 55197582 -147887950 - L1ME3 LINE L1 0 6162 6075 204 97 0 0 chr5 55200736 55200767 -147884765 + (TG)n Simple_repeat Simple_repeat 2 32 0 11549 35 5 5 chr5 55200829 55202994 -147882538 + L1PA6 LINE L1 3984 6151 -3 265 286 12 24 chr5 55204914 55204998 -147880534 + MIR SINE MIR 114 196 -66 929 184 99 162 chr5 55205824 55206480 -147879052 + LTR34 LTR ERV1 1 695 -4 21 0 0 0 chr5 55207735 55207756 -147877776 + AT_rich Low_complexity Low_complexity 1 21 0 482 297 104 40 chr5 55208297 55208519 -147877013 + MIR SINE MIR 17 252 -10 362 322 49 31 chr5 55209075 55209284 -147876248 + MIR SINE MIR 38 247 -15 3845 245 109 36 chr5 55209438 55209643 -147875889 + L1MB5 LINE L1 3 192 -6452 3226 129 4 21 chr5 55209643 55210162 -147875370 - MER75 DNA T2_type -4 510 1 3845 245 109 36 chr5 55210162 55211977 -147873555 + L1MB5 LINE L1 192 2493 -4151 1415 185 24 47 chr5 55211977 55212275 -147873257 + AluJo SINE Alu 1 291 -21 3845 245 109 36 chr5 55212275 55212894 -147872638 + L1MB5 LINE L1 2493 3065 -3579 813 235 48 80 chr5 55212926 55213195 -147872337 + L1MB5 LINE L1 3672 3948 -2696 1950 96 59 0 chr5 55213195 55213467 -147872065 + AluSp SINE Alu 1 288 -25 813 235 48 80 chr5 55213467 55213538 -147871994 + L1MB5 LINE L1 3948 4002 -2642 1997 154 0 7 chr5 55213538 55213837 -147871695 + AluJb SINE Alu 3 299 -13 813 235 48 80 chr5 55213837 55213869 -147871663 + L1MB5 LINE L1 4002 4033 -2611 5496 204 91 44 chr5 55213880 55214558 -147870974 + L1MB5 LINE L1 4335 4980 -1692 1672 166 37 64 chr5 55214558 55214932 -147870600 - MLT1A1 LTR MaLR 0 365 2 5496 204 91 44 chr5 55214932 55215872 -147869660 + L1MB5 LINE L1 4980 6087 -585 2447 74 0 6 chr5 55215872 55216184 -147869348 + AluY SINE Alu 1 310 -1 5496 204 91 44 chr5 55216184 55216775 -147868757 + L1MB5 LINE L1 6087 6649 -23 24 67 0 0 chr5 55217627 55217672 -147867860 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 55220067 55220088 -147865444 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 55220616 55220647 -147864885 + AT_rich Low_complexity Low_complexity 1 31 0 196 354 143 11 chr5 55221384 55221559 -147863973 - MIR SINE MIR 0 262 65 881 290 5 5 chr5 55223163 55223380 -147862152 + MIR SINE MIR 43 259 -3 189 339 118 39 chr5 55223477 55223604 -147861928 + MIR3 SINE MIR 24 160 -48 217 293 53 0 chr5 55223607 55223682 -147861850 - MIR3 SINE MIR -6 202 124 23 33 0 0 chr5 55225342 55225372 -147860160 + AT_rich Low_complexity Low_complexity 1 30 0 319 246 201 0 chr5 55225671 55225805 -147859727 - LTR33 LTR ERVL -348 173 13 271 147 35 56 chr5 55226270 55226413 -147859119 + (TTATA)n Simple_repeat Simple_repeat 5 144 0 238 152 61 45 chr5 55226620 55226686 -147858846 + L1MC4 LINE L1 6637 6703 -1339 285 279 0 15 chr5 55226686 55226822 -147858710 + (TA)n Simple_repeat Simple_repeat 2 135 0 379 313 216 19 chr5 55226921 55227292 -147858240 - L2 LINE L2 -47 3266 2823 2499 293 86 35 chr5 55227306 55227927 -147857605 - L2 LINE L2 -640 2674 2086 1751 183 0 10 chr5 55227927 55228233 -147857299 + AluJo SINE Alu 1 303 -9 2499 293 86 35 chr5 55228233 55228756 -147856776 - L2 LINE L2 -1228 2086 1472 467 169 138 8 chr5 55229553 55229683 -147855849 + L1MC3 LINE L1 7639 7785 0 444 219 142 35 chr5 55231206 55231375 -147854157 + LTR33A LTR ERVL 5 191 -332 520 245 43 143 chr5 55231444 55231836 -147853696 + LTR33A LTR ERVL 168 520 -3 441 296 48 87 chr5 55232582 55233042 -147852490 - LTR16A1 LTR ERVL -4 453 12 308 342 75 25 chr5 55233363 55233562 -147851970 + L1MEd LINE L1 942 1150 -4969 22 35 0 0 chr5 55234606 55234635 -147850897 + AT_rich Low_complexity Low_complexity 1 29 0 710 272 190 32 chr5 55234862 55235338 -147850194 + MLT1G1 LTR MaLR 1 595 0 387 141 0 0 chr5 55235355 55235419 -147850113 + (TG)n Simple_repeat Simple_repeat 1 64 0 180 309 0 0 chr5 55235654 55235696 -147849836 - L2 LINE L2 -17 3296 3255 22 56 0 0 chr5 55235903 55235939 -147849593 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 55236591 55236614 -147848918 + AT_rich Low_complexity Low_complexity 1 23 0 579 275 90 28 chr5 55237286 55237497 -147848035 - MIR SINE MIR -2 260 37 453 355 50 0 chr5 55237515 55237715 -147847817 - MIR SINE MIR -28 234 25 189 300 0 20 chr5 55237712 55237762 -147847770 + L2 LINE L2 3252 3300 -13 * 9243 146 40 20 chr5 55238138 55239016 -147846516 + L1MA6 LINE L1 3584 4443 -1857 5817 94 39 50 chr5 55239016 55240761 -147844771 + SVA Other Other 28 1386 0 9243 146 40 20 chr5 55240761 55241551 -147843981 + L1MA6 LINE L1 4443 5216 -1084 195 42 0 0 chr5 55241551 55241575 -147843957 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 9243 146 40 20 chr5 55241575 55241599 -147843933 + L1MA6 LINE L1 5216 5238 -1062 1995 135 3 10 chr5 55241599 55241910 -147843622 + AluSx SINE Alu 3 311 -1 9243 146 40 20 chr5 55241910 55242873 -147842659 + L1MA6 LINE L1 5238 6300 0 2212 112 3 0 chr5 55243136 55243432 -147842100 + AluSq SINE Alu 1 297 -16 317 125 18 0 chr5 55243435 55243491 -147842041 + (TA)n Simple_repeat Simple_repeat 1 57 0 454 236 18 0 chr5 55243755 55243865 -147841667 - MER58C DNA MER1_type 0 215 104 225 56 19 74 chr5 55243872 55243926 -147841606 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 200 125 47 62 chr5 55243947 55244011 -147841521 + (TCCCG)n Simple_repeat Simple_repeat 5 67 0 344 283 116 56 chr5 55244363 55244614 -147840918 + L1ME4a LINE L1 5640 5905 -216 283 250 199 6 chr5 55244735 55244891 -147840641 - L1ME4a LINE L1 -3 6118 5933 34 42 0 0 chr5 55244953 55245001 -147840531 + AT_rich Low_complexity Low_complexity 1 48 0 210 191 0 0 chr5 55246612 55246654 -147838878 + (CA)n Simple_repeat Simple_repeat 2 43 0 405 276 32 44 chr5 55247378 55247702 -147837830 - MLT1I LTR MaLR -14 395 1 2191 96 3 3 chr5 55249365 55249666 -147835866 - AluSp SINE Alu -11 302 2 836 116 31 8 chr5 55255433 55255562 -147829970 + AluSq/x SINE Alu 1 132 -181 393 249 133 23 chr5 55257269 55257442 -147828090 - L1 LINE L1 -2582 3564 3373 * 2230 173 196 36 chr5 55257440 55258017 -147827515 + L1MA9 LINE L1 5622 6290 -22 191 237 184 0 chr5 55258079 55258155 -147827377 + MIR3 SINE MIR 114 203 -5 11049 50 5 1 chr5 55258294 55260460 -147825072 + L1PA5 LINE L1 3977 6145 -9 231 204 0 0 chr5 55260460 55260509 -147825023 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 21 57 0 0 chr5 55260847 55260882 -147824650 + AT_rich Low_complexity Low_complexity 1 35 0 354 261 116 43 chr5 55260954 55261092 -147824440 - MIR SINE MIR -109 153 6 305 344 25 18 chr5 55262375 55262538 -147822994 + L1M4 LINE L1 3826 3989 -2157 26 0 0 0 chr5 55265049 55265075 -147820457 + AT_rich Low_complexity Low_complexity 1 26 0 340 298 56 43 chr5 55265116 55265277 -147820255 + L2 LINE L2 3129 3291 -22 595 246 101 42 chr5 55265298 55265586 -147819946 + L1ME LINE L1 616 920 -5285 1236 249 186 35 chr5 55265595 55266408 -147819124 + L1ME LINE L1 1169 1857 -4358 189 0 0 0 chr5 55266408 55266429 -147819103 + (CA)n Simple_repeat Simple_repeat 2 22 0 1236 249 186 35 chr5 55266429 55266658 -147818874 + L1ME LINE L1 1857 2050 -4165 1673 35 0 10 chr5 55266658 55266861 -147818671 + AluY SINE Alu 110 310 -1 1236 249 186 35 chr5 55266861 55267282 -147818250 + L1ME LINE L1 2050 2832 -3383 252 77 0 0 chr5 55267443 55267482 -147818050 + (A)n Simple_repeat Simple_repeat 1 39 0 1463 187 11 15 chr5 55267587 55267854 -147817678 - AluJo SINE Alu -21 291 26 195 308 0 0 chr5 55267872 55267924 -147817608 - L2 LINE L2 -5 3267 3216 679 198 43 188 chr5 55268067 55268435 -147817097 - L1MD2 LINE L1 -14 6228 5914 419 321 37 23 chr5 55269045 55269263 -147816269 + MIR SINE MIR 37 257 -5 330 196 214 18 chr5 55270846 55270857 -147814675 - AluJb SINE Alu -166 136 128 225 0 0 0 chr5 55270857 55270882 -147814650 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 330 196 214 18 chr5 55270882 55270982 -147814550 - AluJb SINE Alu -174 128 3 241 330 108 52 chr5 55271461 55272273 -147813259 + L2 LINE L2 750 1607 -1707 2043 131 6 3 chr5 55272519 55272831 -147812701 + AluSq SINE Alu 1 313 0 27 0 0 0 chr5 55273380 55273407 -147812125 + AT_rich Low_complexity Low_complexity 1 27 0 1460 197 53 11 chr5 55273797 55274081 -147811451 - AluJb SINE Alu -11 301 6 722 307 79 59 chr5 55274153 55274557 -147810975 + L2 LINE L2 2858 3269 -3 2249 73 0 51 chr5 55274580 55274896 -147810636 + AluSg1 SINE Alu 1 300 -9 222 37 0 0 chr5 55274896 55274923 -147810609 + (TA)n Simple_repeat Simple_repeat 1 27 0 262 332 78 66 chr5 55275597 55275784 -147809748 + MLT1K LTR MaLR 336 528 -60 1345 115 60 23 chr5 55275784 55276002 -147809530 - MER30 DNA MER1_type 0 230 5 262 332 78 66 chr5 55276002 55276058 -147809474 + MLT1K LTR MaLR 528 582 -6 1390 270 39 67 chr5 55276950 55277668 -147807864 + MER31-int LTR ERV1 3404 4101 -835 284 257 14 0 chr5 55277922 55277996 -147807536 + LTR37A LTR ERV1 111 185 -241 185 313 24 48 chr5 55278893 55278976 -147806556 + L2 LINE L2 3220 3300 -13 1783 103 82 17 chr5 55281312 55281604 -147803928 - AluSx SINE Alu -1 311 1 1536 228 234 3 chr5 55282496 55283145 -147802387 + L2 LINE L2 1574 2372 -942 2036 167 60 60 chr5 55283174 55283654 -147801878 + LTR54 LTR ERV1 1 480 -30 1211 297 95 7 chr5 55283709 55284140 -147801392 + L2 LINE L2 2405 2873 -441 252 339 142 0 chr5 55286016 55286143 -147799389 - MIR SINE MIR -1 261 117 533 310 83 79 chr5 55286780 55287313 -147798219 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 55287514 55287547 -147797985 + AT_rich Low_complexity Low_complexity 1 33 0 726 239 0 2 chr5 55287818 55287998 -147797534 - L1P LINE L1 -989 5157 4980 3081 146 18 62 chr5 55287998 55288613 -147796919 + L1PB4 LINE L1 5567 6154 -2 726 239 0 2 chr5 55288613 55288631 -147796901 - L1P LINE L1 -1166 4980 4963 240 250 0 16 chr5 55288956 55289020 -147796512 + (TA)n Simple_repeat Simple_repeat 2 64 0 30 77 0 0 chr5 55289084 55289149 -147796383 + AT_rich Low_complexity Low_complexity 1 65 0 738 171 23 0 chr5 55289330 55289459 -147796073 + MER20 DNA MER1_type 87 218 -1 285 237 176 38 chr5 55291144 55291275 -147794257 - L1MC/D LINE L1 -1984 5824 5676 32 0 0 0 chr5 55291545 55291577 -147793955 + AT_rich Low_complexity Low_complexity 1 32 0 180 77 0 0 chr5 55291577 55291603 -147793929 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 201 245 29 29 chr5 55291777 55291844 -147793688 + (TATATG)n Simple_repeat Simple_repeat 1 70 -32 1744 156 126 3 chr5 55291844 55292170 -147793362 - MER47A DNA MER2_type 0 366 1 201 245 29 29 chr5 55292170 55292204 -147793328 + (TATATG)n Simple_repeat Simple_repeat 69 102 0 383 131 83 24 chr5 55292378 55292462 -147793070 + MER5A DNA MER1_type 94 182 -7 389 314 50 6 chr5 55292498 55292657 -147792875 - MER5B DNA MER1_type 0 178 13 413 289 137 15 chr5 55292770 55292967 -147792565 + MIR SINE MIR 32 252 -10 242 191 64 91 chr5 55294951 55295061 -147790471 + L1MC4 LINE L1 7864 7970 -72 29 0 0 0 chr5 55296569 55296598 -147788934 + AT_rich Low_complexity Low_complexity 1 29 0 1413 98 24 0 chr5 55296598 55296803 -147788729 - L1PA10 LINE L1 0 6168 5959 369 335 108 21 chr5 55297342 55297536 -147787996 - L2 LINE L2 -4 3268 3058 830 90 14 14 chr5 55297642 55297787 -147787745 - L1PA8A LINE L1 -102 6029 5885 401 290 0 0 chr5 55297901 55298001 -147787531 - MLT1I LTR MaLR -231 178 79 290 298 35 7 chr5 55298114 55298255 -147787277 - HAL1 LINE L1 -860 1647 1503 847 252 24 0 chr5 55298414 55298620 -147786912 - MER58A DNA MER1_type -13 211 1 268 253 35 53 chr5 55298638 55298808 -147786724 - L1MEd LINE L1 -4910 1209 1043 497 220 28 0 chr5 55298870 55298979 -147786553 - MER81 DNA DNA -2 112 1 301 207 0 0 chr5 55299567 55299625 -147785907 - MER20 DNA MER1_type -61 158 101 560 200 12 97 chr5 55299644 55299809 -147785723 - MER20 DNA MER1_type -68 151 1 360 111 0 56 chr5 55300348 55300420 -147785112 + L1 LINE L1 3990 4057 -2089 1602 126 3 21 chr5 55300420 55300704 -147784828 + L1MA5A LINE L1 6018 6297 0 3712 235 148 11 chr5 55300719 55302601 -147782931 + L1ME1 LINE L1 2171 4298 -1917 906 183 88 88 chr5 55302601 55302929 -147782603 + L1ME1 LINE L1 5580 5907 -328 443 98 24 49 chr5 55303099 55303181 -147782351 + L1PA10 LINE L1 6085 6164 -4 1196 243 58 25 chr5 55303354 55303754 -147781778 - MLT1C LTR MaLR 0 467 55 21 0 0 0 chr5 55304313 55304334 -147781198 + AT_rich Low_complexity Low_complexity 1 21 0 4209 138 21 11 chr5 55304366 55304640 -147780892 - L1MB3 LINE L1 -2 6181 5911 2198 116 0 3 chr5 55304640 55304933 -147780599 - AluSx SINE Alu -20 292 1 4209 138 21 11 chr5 55304933 55305403 -147780129 - L1MB3 LINE L1 -272 5911 5429 274 0 73 0 chr5 55306735 55306776 -147778756 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 441 210 10 0 chr5 55306988 55307088 -147778444 - L1MA8 LINE L1 -201 6090 5990 256 279 95 58 chr5 55307999 55308189 -147777343 + L2 LINE L2 3117 3313 0 464 313 145 32 chr5 55308775 55309210 -147776322 + L1ME4a LINE L1 5579 6062 -59 1384 192 48 34 chr5 55309213 55309505 -147776027 - AluJo SINE Alu -3 309 14 2259 98 7 0 chr5 55309554 55309851 -147775681 - AluSq SINE Alu -14 299 1 2354 93 0 6 chr5 55310024 55310335 -147775197 - AluY SINE Alu -2 309 1 2364 57 40 3 chr5 55311837 55312137 -147773395 + AluY SINE Alu 1 311 0 624 239 0 0 chr5 55312598 55312715 -147772817 - FLAM_A SINE Alu -16 117 1 2244 87 7 10 chr5 55313816 55314114 -147771418 + AluSx SINE Alu 1 297 -15 235 71 48 0 chr5 55314378 55314420 -147771112 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 224 0 17 chr5 55415075 55415133 -147670399 + GA-rich Low_complexity Low_complexity 3 59 0 216 0 0 0 chr5 55415497 55415521 -147670011 + (A)n Simple_repeat Simple_repeat 1 24 0 1814 146 40 0 chr5 55415577 55415874 -147669658 - AluSx SINE Alu 0 308 1 36 0 0 0 chr5 55415877 55415913 -147669619 + AT_rich Low_complexity Low_complexity 1 36 0 223 256 103 45 chr5 55415996 55416074 -147669458 + MIR SINE MIR 71 143 -119 1713 214 61 13 chr5 55416074 55416452 -147669080 - MSTD LTR MaLR 0 396 1 223 256 103 45 chr5 55416452 55416527 -147669005 + MIR SINE MIR 143 233 -29 24 0 0 0 chr5 55417542 55417566 -147667966 + AT_rich Low_complexity Low_complexity 1 24 0 277 315 91 35 chr5 55418902 55419134 -147666398 + L2 LINE L2 1825 2069 -1245 733 243 149 4 chr5 55419448 55419703 -147665829 + L2 LINE L2 3021 3312 -1 275 280 51 69 chr5 55419813 55419988 -147665544 - MLT1J LTR MaLR -11 500 329 363 284 15 37 chr5 55420145 55420279 -147665253 - MLT1J1 LTR MaLR -308 138 8 1738 200 82 22 chr5 55420905 55421004 -147664528 + Charlie1b DNA MER1_type 1 93 -2668 1862 141 31 0 chr5 55421004 55421294 -147664238 + AluSx SINE Alu 1 299 -13 1738 200 82 22 chr5 55421294 55421645 -147663887 + Charlie1b DNA MER1_type 93 478 -45 380 167 0 36 chr5 55421671 55421755 -147663777 - LTR30 LTR ERV1 -98 624 544 266 180 0 0 chr5 55421755 55421805 -147663727 - LTR12 LTR ERV1 -437 277 228 239 36 0 0 chr5 55421808 55421836 -147663696 + Charlie1b DNA MER1_type 463 490 -33 279 0 0 0 chr5 55424532 55424563 -147660969 + (CA)n Simple_repeat Simple_repeat 1 31 0 215 125 25 0 chr5 55426166 55426206 -147659326 + (TATG)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr5 55427115 55427135 -147658397 + (T)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 55428532 55428555 -147656977 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr5 55430230 55430259 -147655273 + AT_rich Low_complexity Low_complexity 1 29 0 190 231 19 19 chr5 55432937 55432989 -147652543 + MIR3 SINE MIR 157 208 0 498 108 0 0 chr5 55434064 55434138 -147651394 + (A)n Simple_repeat Simple_repeat 1 74 0 350 184 0 23 chr5 55435136 55435223 -147650309 + (CTCG)n Simple_repeat Simple_repeat 1 85 0 24 0 0 0 chr5 55436480 55436504 -147649028 + AT_rich Low_complexity Low_complexity 1 24 0 298 241 11 46 chr5 55437425 55437512 -147648020 + CT-rich Low_complexity Low_complexity 2 85 0 23 0 0 0 chr5 55437959 55437982 -147647550 + AT_rich Low_complexity Low_complexity 1 23 0 333 0 0 0 chr5 55438331 55438368 -147647164 + (CA)n Simple_repeat Simple_repeat 2 38 0 267 103 0 0 chr5 55440302 55440341 -147645191 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 205 179 0 26 chr5 55441592 55441631 -147643901 + CT-rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr5 55443063 55443084 -147642448 + (T)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 55448780 55448808 -147636724 + AT_rich Low_complexity Low_complexity 1 28 0 874 221 40 107 chr5 55451584 55451987 -147633545 + L1ME1 LINE L1 5786 6161 -5 316 286 118 89 chr5 55453398 55453747 -147631785 + MLT1J LTR MaLR 44 402 -109 2419 209 67 65 chr5 55453750 55454397 -147631135 - MLT1E1 LTR MaLR -6 648 1 2125 108 7 3 chr5 55454625 55454921 -147630611 + AluSx SINE Alu 1 297 -15 1778 151 0 39 chr5 55454926 55455231 -147630301 + AluJo SINE Alu 1 293 -19 2840 213 18 15 chr5 55455483 55456090 -147629442 - MER90 LTR ERV1 0 614 6 25 31 0 0 chr5 55458274 55458306 -147627226 + AT_rich Low_complexity Low_complexity 1 32 0 1739 174 0 21 chr5 55459510 55459798 -147625734 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 55459919 55459941 -147625591 + AT_rich Low_complexity Low_complexity 1 22 0 2017 134 0 0 chr5 55460341 55460653 -147624879 - AluJb SINE Alu 0 312 1 381 286 132 25 chr5 55460837 55461233 -147624299 - LTR33 LTR ERVL -6 515 29 1738 218 127 7 chr5 55461255 55461375 -147624157 - MLT1D LTR MaLR -1 504 400 2162 126 7 0 chr5 55461375 55461685 -147623847 + AluSx SINE Alu 1 312 0 1738 218 127 7 chr5 55461685 55461996 -147623536 - MLT1D LTR MaLR -105 400 21 186 43 0 0 chr5 55462417 55462440 -147623092 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1512 180 17 42 chr5 55462442 55462731 -147622801 - AluJo SINE Alu -30 282 1 668 299 83 51 chr5 55462822 55463160 -147622372 + LTR33 LTR ERVL 11 370 -151 2048 116 35 0 chr5 55463160 55463445 -147622087 - AluSq SINE Alu -18 295 1 668 299 83 51 chr5 55463445 55463578 -147621954 + LTR33 LTR ERVL 370 497 -24 1636 181 8 46 chr5 55465047 55465418 -147620114 + L1MA3 LINE L1 5948 6304 -1 1035 252 108 44 chr5 55466482 55466891 -147618641 - LTR16A LTR ERVL 0 450 16 1205 361 41 23 chr5 55467027 55468239 -147617293 - HERVL LTR ERVL -314 5340 4102 701 279 69 40 chr5 55468297 55468410 -147617122 - LTR16A LTR ERVL -72 378 270 849 79 79 0 chr5 55468410 55468537 -147616995 - MER85 DNA T2_type -2 137 1 701 279 69 40 chr5 55468537 55468670 -147616862 - LTR16A LTR ERVL -180 270 125 42889 49 1 1 chr5 55469922 55476077 -147609455 - L1PA4 LINE L1 -2 6153 3 312 88 175 18 chr5 55478302 55478359 -147607173 - MSTC LTR MaLR 0 428 363 1316 100 0 0 chr5 55478361 55478531 -147607001 + AluSc SINE Alu 135 304 -5 1040 303 27 11 chr5 55478936 55479303 -147606229 + LTR16B LTR ERVL 39 411 -53 943 245 72 32 chr5 55479377 55479749 -147605783 - MLT1G3 LTR MaLR -177 353 1 28 29 0 0 chr5 55481824 55481859 -147603673 + AT_rich Low_complexity Low_complexity 1 35 0 398 274 196 0 chr5 55485574 55485742 -147599790 + MIR SINE MIR 57 257 -5 1867 171 0 3 chr5 55485939 55486237 -147599295 + AluJb SINE Alu 1 297 -15 290 313 82 8 chr5 55486867 55487001 -147598531 + MIR SINE MIR 112 255 -7 365 314 61 76 chr5 55487083 55487360 -147598172 - L2 LINE L2 -56 3257 2985 36480 30 1 0 chr5 55488761 55493999 -147591533 + L1PA2 LINE L1 952 6191 0 23 0 0 0 chr5 55494186 55494209 -147591323 + AT_rich Low_complexity Low_complexity 1 23 0 280 337 101 28 chr5 55494217 55494395 -147591137 + MIR SINE MIR 6 196 -66 1206 336 44 7 chr5 55495110 55495544 -147589988 - LTR16A LTR ERVL 0 450 1 191 311 79 45 chr5 55497377 55497554 -147587978 - MIR SINE MIR -46 216 34 359 336 66 12 chr5 55498302 55498543 -147586989 + L3b LINE CR1 1125 1378 -205 1078 192 13 18 chr5 55498624 55498848 -147586684 + MLT1B LTR MaLR 1 223 -167 867 225 111 16 chr5 55498888 55499132 -147586400 + MLT1B LTR MaLR 201 467 0 1402 129 5 18 chr5 55499834 55500051 -147585481 - AluSg/x SINE Alu -28 284 71 21 0 0 0 chr5 55500552 55500573 -147584959 + AT_rich Low_complexity Low_complexity 1 21 0 332 349 67 20 chr5 55500590 55500785 -147584747 - MIR SINE MIR -50 212 9 228 135 0 0 chr5 55501277 55501314 -147584218 - MIR3 SINE MIR -13 195 159 858 350 161 25 chr5 55501329 55502173 -147583359 - L3 LINE CR1 -136 1441 483 364 174 29 0 chr5 55502290 55502359 -147583173 + MLT1J LTR MaLR 99 169 -342 492 204 10 0 chr5 55502659 55502762 -147582770 - U13 snRNA snRNA 0 104 1 8517 164 116 58 chr5 55504584 55504929 -147580603 + L1MC1 LINE L1 20 343 -6083 267 31 0 0 chr5 55504929 55504961 -147580571 + (GA)n Simple_repeat Simple_repeat 1 32 0 8517 164 116 58 chr5 55504961 55505574 -147579958 + L1MC1 LINE L1 343 919 -5507 353 0 0 0 chr5 55505574 55505617 -147579915 - L1PA3 LINE L1 -4 6151 6109 8517 164 116 58 chr5 55505617 55506044 -147579488 + L1MC1 LINE L1 919 1320 -5106 249 83 0 0 chr5 55506044 55506080 -147579452 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8517 164 116 58 chr5 55506080 55506866 -147578666 + L1MC1 LINE L1 1320 2320 -4106 1211 199 0 4 chr5 55506866 55507092 -147578440 + AluJo SINE Alu 87 311 -1 10755 223 40 11 chr5 55507095 55507603 -147577929 + L1MC1 LINE L1 2323 2815 -3798 1756 106 0 12 chr5 55507603 55507885 -147577647 + AluY SINE Alu 41 319 0 10755 223 40 11 chr5 55507885 55511102 -147574430 + L1MC1 LINE L1 2815 6166 -447 191 212 15 76 chr5 55511130 55511196 -147574336 + L2 LINE L2 3250 3311 -2 2523 43 10 0 chr5 55511487 55511791 -147573741 - AluY SINE Alu -4 307 1 271 326 61 10 chr5 55512014 55512112 -147573420 - L2 LINE L2 -37 3235 3133 1796 154 9 39 chr5 55512333 55512724 -147572808 + Tigger3(Golem) DNA MER2_type 1 3028 -1 836 212 309 42 chr5 55512795 55513205 -147572327 + MLT1G1 LTR MaLR 47 593 -2 1318 161 0 128 chr5 55513519 55513824 -147571708 + AluJo SINE Alu 1 266 -46 43994 41 1 1 chr5 55514103 55520254 -147565278 - L1PA3 LINE L1 -4 6151 1 2589 31 0 0 chr5 55520477 55520768 -147564764 + AluYa5 SINE Alu 1 291 -20 253 250 132 69 chr5 55520946 55521090 -147564442 - MIR SINE MIR 0 262 110 2164 104 30 0 chr5 55521122 55521419 -147564113 - AluSq SINE Alu -7 306 1 258 321 0 12 chr5 55521446 55521530 -147564002 - MIR SINE MIR -173 89 7 204 146 24 0 chr5 55521585 55521626 -147563906 + GA-rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr5 55522613 55522655 -147562877 + AT_rich Low_complexity Low_complexity 1 42 0 227 316 29 73 chr5 55525048 55525184 -147560348 + MLT1K LTR MaLR 16 145 -443 395 295 104 17 chr5 55525224 55525397 -147560135 + MLT1K LTR MaLR 237 424 -164 2103 175 42 22 chr5 55525511 55525967 -147559565 - MLT1C LTR MaLR 0 467 3 290 347 44 21 chr5 55526971 55527193 -147558339 + MIR SINE MIR 16 262 0 521 246 78 57 chr5 55527419 55527663 -147557869 - LTR16A1 LTR ERVL 0 457 209 1990 107 0 0 chr5 55528840 55529092 -147556440 - AluSx SINE Alu -39 273 22 810 286 67 44 chr5 55529661 55530140 -147555392 - L1ME4a LINE L1 -156 5965 5476 244 369 40 13 chr5 55530919 55531068 -147554464 + MIR3 SINE MIR 28 180 -28 1740 27 32 9 chr5 55531499 55531720 -147553812 - L1PA4 LINE L1 0 6155 5930 787 258 135 56 chr5 55532327 55532862 -147552670 + LTR50 LTR ERVL 17 593 -202 309 207 85 0 chr5 55532903 55532985 -147552547 + LTR33A LTR ERVL 430 518 -5 1015 243 164 22 chr5 55534605 55534733 -147550799 + MLT1A1 LTR MaLR 4 112 -253 2604 17 40 0 chr5 55534733 55535032 -147550500 - AluY SINE Alu 0 311 1 1015 243 164 22 chr5 55535032 55535220 -147550312 + MLT1A1 LTR MaLR 112 365 0 642 151 103 16 chr5 55535220 55535346 -147550186 + MLT1A1-int LTR MaLR 3 139 -1596 21 36 0 0 chr5 55535478 55535506 -147550026 + AT_rich Low_complexity Low_complexity 1 28 0 259 323 24 71 chr5 55535941 55536068 -147549464 + MIR SINE MIR 23 143 -65 230 254 35 26 chr5 55536757 55536871 -147548661 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 446 258 18 18 chr5 55536892 55537055 -147548477 + HAL1b LINE L1 1179 1341 -7 231 279 0 29 chr5 55537099 55537167 -147548365 + MIR SINE MIR 126 191 -71 213 65 0 0 chr5 55537797 55537828 -147547704 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 415 277 20 0 chr5 55539860 55539961 -147545571 + MER5A DNA MER1_type 4 106 -83 24 0 0 0 chr5 55540230 55540254 -147545278 + AT_rich Low_complexity Low_complexity 1 24 0 2298 94 0 13 chr5 55540734 55541041 -147544491 + AluSx SINE Alu 1 303 -9 1840 90 28 164 chr5 55541362 55541794 -147543738 - THE1C LTR MaLR -2 373 1 419 321 69 0 chr5 55541999 55542245 -147543287 - LTR16C LTR ERVL -2 489 227 585 228 0 15 chr5 55542853 55542989 -147542543 + L1PA16 LINE L1 6033 6166 0 2358 172 25 20 chr5 55543317 55543764 -147541768 - MER39 LTR ERV1 0 707 259 208 275 66 11 chr5 55544823 55544914 -147540618 - MIR SINE MIR -70 192 97 432 303 8 0 chr5 55544918 55545040 -147540492 - LTR16A1 LTR ERVL -2 455 333 21 0 0 0 chr5 55545553 55545574 -147539958 + AT_rich Low_complexity Low_complexity 1 21 0 205 89 44 0 chr5 55545664 55545709 -147539823 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 205 321 0 24 chr5 55545991 55546075 -147539457 - MIR SINE MIR -173 89 8 247 380 88 41 chr5 55546109 55546291 -147539241 + L3 LINE CR1 1143 1315 -262 1802 83 4 0 chr5 55546291 55546531 -147539001 + L1PA7 LINE L1 5914 6154 0 247 380 88 41 chr5 55546531 55546735 -147538797 + L3 LINE CR1 1315 1547 -30 2371 61 0 0 chr5 55546836 55547130 -147538402 - AluY SINE Alu -17 294 1 198 0 0 0 chr5 55549488 55549510 -147536022 + (TTG)n Simple_repeat Simple_repeat 2 23 0 743 303 8 10 chr5 55549736 55550048 -147535484 - L1ME2 LINE L1 -150 5971 5667 353 312 64 8 chr5 55550663 55550788 -147534744 - L2 LINE L2 -5 3267 3136 1954 126 60 20 chr5 55552677 55553025 -147532507 + THE1C LTR MaLR 14 375 0 600 281 27 16 chr5 55554097 55554282 -147531250 + MER5A DNA MER1_type 1 187 -2 30 45 0 0 chr5 55556109 55556153 -147529379 + AT_rich Low_complexity Low_complexity 1 44 0 231 276 13 0 chr5 55556336 55556412 -147529120 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 1905 130 29 46 chr5 55558636 55558981 -147526551 - MER44D DNA MER2_type 0 609 1 374 278 8 48 chr5 55559518 55559644 -147525888 - L2 LINE L2 0 3313 3193 4921 189 54 19 chr5 55559885 55560407 -147525125 + L1MA10 LINE L1 4164 4666 -1502 2745 16 0 0 chr5 55560407 55560712 -147524820 - AluYa5 SINE Alu -6 305 1 4921 189 54 19 chr5 55560712 55561392 -147524140 + L1MA10 LINE L1 4666 5416 -752 405 0 0 0 chr5 55561392 55561437 -147524095 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 4921 189 54 19 chr5 55561437 55561761 -147523771 + L1MA10 LINE L1 5416 5727 -441 2390 113 40 9 chr5 55561761 55562107 -147523425 - THE1B LTR MaLR 0 364 8 1132 164 34 11 chr5 55562108 55562480 -147523052 + MER21A LTR ERV1 100 500 -363 399 196 157 0 chr5 55562480 55562582 -147522950 + MIR SINE MIR 145 262 0 3252 82 27 0 chr5 55562972 55563413 -147522119 - MLT2A2 LTR ERVL 0 453 1 2774 191 46 15 chr5 55563413 55564000 -147521532 + L1MA10 LINE L1 5723 6327 -7 21 36 0 0 chr5 55564769 55564797 -147520735 + AT_rich Low_complexity Low_complexity 1 28 0 2479 47 0 3 chr5 55564966 55565263 -147520269 - AluY SINE Alu -15 296 1 211 250 143 12 chr5 55565690 55565774 -147519758 + MIR SINE MIR 112 206 -56 233 326 65 29 chr5 55565821 55565959 -147519573 - MER5B DNA MER1_type 0 178 36 23 0 0 0 chr5 55567742 55567765 -147517767 + AT_rich Low_complexity Low_complexity 1 23 0 42480 35 22 1 chr5 55567931 55573955 -147511577 - L1PA2 LINE L1 0 6155 4 32 43 0 0 chr5 55574563 55574609 -147510923 + AT_rich Low_complexity Low_complexity 1 46 0 502 217 25 56 chr5 55575614 55575775 -147509757 - AluJb SINE Alu -20 292 137 486 387 55 31 chr5 55575806 55576191 -147509341 + L2 LINE L2 2425 2818 -496 811 347 27 15 chr5 55577260 55577597 -147507935 + LTR33 LTR ERVL 148 488 -33 25 51 0 0 chr5 55579317 55579356 -147506176 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr5 55579799 55579823 -147505709 + AT_rich Low_complexity Low_complexity 1 24 0 186 143 0 0 chr5 55580148 55580183 -147505349 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 248 167 0 19 chr5 55580363 55580417 -147505115 + (TA)n Simple_repeat Simple_repeat 2 54 0 2179 89 4 0 chr5 55580992 55581297 -147504235 + AluSp SINE Alu 2 307 0 212 273 71 20 chr5 55581375 55581474 -147504058 + MIR SINE MIR 84 187 -75 32 43 0 0 chr5 55581483 55581529 -147504003 + AT_rich Low_complexity Low_complexity 1 46 0 211 215 77 31 chr5 55581592 55581657 -147503875 - MIR3 SINE MIR -36 172 105 246 174 43 0 chr5 55582529 55582575 -147502957 - AluJb SINE Alu -10 290 243 1208 176 0 0 chr5 55582575 55582762 -147502770 - AluJb SINE Alu -124 188 2 2089 138 3 0 chr5 55582821 55583119 -147502413 - AluSx SINE Alu -13 299 1 182 327 0 0 chr5 55583318 55583373 -147502159 + L2 LINE L2 3186 3240 -32 310 237 52 31 chr5 55584945 55585042 -147500490 + L1MC4 LINE L1 6614 6712 -1330 2132 115 3 0 chr5 55585118 55585413 -147500119 + AluSg SINE Alu 1 296 -14 1290 266 53 39 chr5 55586257 55586901 -147498631 + L1MC4 LINE L1 6995 7647 -395 482 154 0 89 chr5 55587036 55587159 -147498373 + L1PA11 LINE L1 6063 6174 0 247 125 0 54 chr5 55587176 55587232 -147498300 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 366 339 75 23 chr5 55589113 55589287 -147496245 - MIR3 SINE MIR -17 191 9 1917 192 30 5 chr5 55589619 55590046 -147495486 - L1MB4 LINE L1 -1 6179 5742 658 243 28 0 chr5 55590302 55590446 -147495086 + FAM SINE Alu 21 168 -17 199 230 81 27 chr5 55591386 55591460 -147494072 - L3 LINE CR1 -4 1573 1496 182 275 50 25 chr5 55592711 55592791 -147492741 + MIR SINE MIR 105 186 -76 * 220 294 29 40 chr5 55592760 55592876 -147492656 + MIR SINE MIR 75 196 -12 4728 283 57 51 chr5 55592915 55593003 -147492529 + L1MEc LINE L1 46 132 -6083 207 0 0 0 chr5 55593003 55593026 -147492506 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4728 283 57 51 chr5 55593026 55594604 -147490928 + L1MEc LINE L1 132 1698 -4517 1602 139 101 35 chr5 55594604 55594920 -147490612 + MER44D DNA MER2_type 3 609 0 4728 283 57 51 chr5 55594920 55596019 -147489513 + L1MEc LINE L1 1698 2788 -3427 24 61 0 0 chr5 55596575 55596608 -147488924 + AT_rich Low_complexity Low_complexity 1 33 0 289 286 124 22 chr5 55597078 55597287 -147488245 - MIR SINE MIR -39 223 5 3293 75 0 2 chr5 55599737 55600178 -147485354 - L1PA7 LINE L1 -5 6149 5710 25 31 0 0 chr5 55600184 55600216 -147485316 + AT_rich Low_complexity Low_complexity 1 32 0 467 309 22 14 chr5 55600574 55600713 -147484819 - MIR3 SINE MIR -37 171 32 1998 146 7 3 chr5 55601290 55601599 -147483933 + AluJb SINE Alu 1 310 -2 1511 197 3 14 chr5 55602343 55602637 -147482895 - AluJo SINE Alu -21 291 1 1052 361 92 38 chr5 55602638 55603430 -147482102 + L3 LINE CR1 405 1269 -308 5508 49 0 0 chr5 55603430 55604108 -147481424 + L1PA7 LINE L1 5475 6152 -2 1052 361 92 38 chr5 55604108 55604356 -147481176 + L3 LINE CR1 1269 1502 -75 243 61 0 0 chr5 55605216 55605249 -147480283 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1783 40 5 5 chr5 55605415 55605639 -147479893 - L1PA7 LINE L1 -3 6151 5928 340 101 0 101 chr5 55606714 55606793 -147478739 - L1MA8 LINE L1 -3 6288 6218 1011 126 62 10 chr5 55606936 55607127 -147478405 - L1MA7 LINE L1 -292 6008 5812 326 263 139 15 chr5 55607184 55607321 -147478211 - MARNA DNA Mariner -344 242 89 21 0 0 0 chr5 55607799 55607820 -147477712 + AT_rich Low_complexity Low_complexity 1 21 0 234 242 150 39 chr5 55608299 55608452 -147477080 - L1ME4a LINE L1 -74 6047 5878 300 312 73 18 chr5 55608642 55608751 -147476781 + MIR SINE MIR 21 135 -127 180 0 0 0 chr5 55609455 55609475 -147476057 + (CA)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr5 55610752 55610775 -147474757 + AT_rich Low_complexity Low_complexity 1 23 0 522 205 200 5 chr5 55610951 55611141 -147474391 + MER69 DNA AcHobo 2300 2526 0 479 277 77 24 chr5 55612806 55613079 -147472453 + L1ME3A LINE L1 5449 5739 -445 30 27 0 0 chr5 55613165 55613202 -147472330 + AT_rich Low_complexity Low_complexity 1 37 0 2044 104 11 0 chr5 55613257 55613569 -147471963 + AluSp SINE Alu 1 315 0 575 284 75 55 chr5 55613576 55614242 -147471290 + L1MB3 LINE L1 1041 1876 -4659 344 248 130 29 chr5 55614555 55614793 -147470739 + L1MB3 LINE L1 2526 2787 -3595 1366 268 109 19 chr5 55614923 55615763 -147469769 + L1MB3 LINE L1 5223 6164 -255 645 203 40 0 chr5 55615676 55615824 -147469708 + L1ME3A LINE L1 6077 6230 -176 * 273 241 0 17 chr5 55616245 55616303 -147469229 + L2 LINE L2 3201 3257 -15 25 0 0 0 chr5 55617100 55617125 -147468407 + AT_rich Low_complexity Low_complexity 1 25 0 320 302 86 0 chr5 55617690 55617806 -147467726 + L2 LINE L2 3170 3295 -18 948 201 0 0 chr5 55618539 55618713 -147466819 - FRAM SINE Alu -3 173 1 230 291 77 41 chr5 55619450 55619538 -147465994 - MIR SINE MIR -66 142 54 517 285 75 20 chr5 55620961 55621161 -147464371 - MIR SINE MIR -5 257 47 1834 162 41 33 chr5 55621453 55621817 -147463715 - THE1C LTR MaLR 0 375 9 893 186 107 11 chr5 55622368 55622545 -147462987 - MER20 DNA MER1_type -2 217 24 22 35 0 0 chr5 55623087 55623116 -147462416 + AT_rich Low_complexity Low_complexity 1 29 0 658 240 110 49 chr5 55624824 55625242 -147460290 + L1ME4a LINE L1 5672 6121 0 246 309 87 32 chr5 55625694 55625820 -147459712 - L2 LINE L2 -1 3312 3180 327 354 0 16 chr5 55626626 55626753 -147458779 + CT-rich Low_complexity Low_complexity 2 126 0 237 246 0 0 chr5 55627480 55627545 -147457987 + (TA)n Simple_repeat Simple_repeat 2 66 0 2241 119 14 8 chr5 55627549 55627902 -147457630 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr5 55627942 55627964 -147457568 + AT_rich Low_complexity Low_complexity 1 22 0 843 213 42 28 chr5 55628196 55628412 -147457120 - MER20 DNA MER1_type 0 219 1 842 182 0 6 chr5 55628895 55629060 -147456472 + L1PA15 LINE L1 6002 6165 0 24 0 0 0 chr5 55631192 55631216 -147454316 + AT_rich Low_complexity Low_complexity 1 24 0 338 201 49 21 chr5 55631375 55631519 -147454013 + (TA)n Simple_repeat Simple_repeat 1 148 0 24 32 0 0 chr5 55632030 55632061 -147453471 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 55632228 55632264 -147453268 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 55633918 55633940 -147451592 + AT_rich Low_complexity Low_complexity 1 22 0 212 158 0 0 chr5 55634311 55634349 -147451183 + (CA)n Simple_repeat Simple_repeat 2 39 0 282 115 0 0 chr5 55635168 55635220 -147450312 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 236 299 52 52 chr5 55635224 55635358 -147450174 - L2 LINE L2 -4 3309 3176 38 0 0 0 chr5 55635532 55635570 -147449962 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 55635737 55635767 -147449765 + AT_rich Low_complexity Low_complexity 1 30 0 32 75 0 0 chr5 55636951 55637018 -147448514 + AT_rich Low_complexity Low_complexity 1 67 0 390 360 32 11 chr5 55688958 55689144 -147396388 - MIR SINE MIR -70 192 3 21 36 0 0 chr5 55689172 55689200 -147396332 + AT_rich Low_complexity Low_complexity 1 28 0 621 149 0 106 chr5 55689616 55689757 -147395775 + FLAM_C SINE Alu 2 127 -6 384 268 62 0 chr5 55691198 55691295 -147394237 + MIR SINE MIR 91 193 -69 14892 41 3 1 chr5 55691397 55696731 -147388801 + L1PA4 LINE L1 676 6152 -3 402 308 69 52 chr5 55697549 55697971 -147387561 - L1M4 LINE L1 -2391 3755 3327 330 278 156 0 chr5 55698042 55698222 -147387310 - L1M4 LINE L1 -2970 3176 2969 24 53 0 0 chr5 55698563 55698601 -147386931 + AT_rich Low_complexity Low_complexity 1 38 0 390 321 127 6 chr5 55699717 55699882 -147385650 + MIR SINE MIR 75 259 -3 23 33 0 0 chr5 55699913 55699943 -147385589 + AT_rich Low_complexity Low_complexity 1 30 0 1625 148 78 31 chr5 55700980 55701338 -147384194 + THE1C LTR MaLR 1 375 0 35 54 0 0 chr5 55701922 55701978 -147383554 + AT_rich Low_complexity Low_complexity 1 56 0 39 22 0 0 chr5 55703159 55703205 -147382327 + AT_rich Low_complexity Low_complexity 1 46 0 1244 196 37 43 chr5 55703222 55703548 -147381984 - MER33 DNA MER1_type 0 324 1 315 322 166 24 chr5 55704415 55704626 -147380906 + MIR SINE MIR 18 258 -4 493 333 65 84 chr5 55704701 55705163 -147380369 - L2 LINE L2 0 3272 2820 444 325 110 5 chr5 55707121 55707330 -147378202 + MIR SINE MIR 15 245 -17 208 227 0 0 chr5 55707348 55707392 -147378140 + (CTA)n Simple_repeat Simple_repeat 3 46 0 422 272 84 108 chr5 55707422 55708038 -147377494 - L3 LINE CR1 -15 1562 898 438 333 126 22 chr5 55708117 55708387 -147377145 - L3 LINE CR1 -903 674 377 225 351 0 13 chr5 55709367 55709444 -147376088 - L2 LINE L2 -212 3060 2985 509 296 88 21 chr5 55711146 55711395 -147374137 - MIR SINE MIR -1 261 3 335 71 0 18 chr5 55711973 55712029 -147373503 + (TG)n Simple_repeat Simple_repeat 2 56 0 2333 107 7 0 chr5 55712983 55713293 -147372239 + AluSx SINE Alu 1 312 0 1959 137 14 0 chr5 55714854 55715147 -147370385 + AluSx SINE Alu 1 297 -15 213 65 0 0 chr5 55715214 55715245 -147370287 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 21 82 0 0 chr5 55715552 55715601 -147369931 + AT_rich Low_complexity Low_complexity 1 49 0 41 36 0 0 chr5 55718076 55718131 -147367401 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 55719956 55719977 -147365555 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 55720027 55720048 -147365484 + AT_rich Low_complexity Low_complexity 1 21 0 352 396 31 13 chr5 55720127 55720352 -147365180 - L3 LINE CR1 -24 1553 1325 906 214 12 0 chr5 55720557 55720730 -147364802 - FAM SINE Alu 0 175 1 1790 168 3 7 chr5 55720764 55721050 -147364482 + AluJb SINE Alu 1 285 -27 185 0 40 0 chr5 55721068 55721093 -147364439 + (CAA)n Simple_repeat Simple_repeat 2 27 0 313 260 73 24 chr5 55721173 55721296 -147364236 - MIR SINE MIR -133 129 1 258 300 39 46 chr5 55721361 55721491 -147364041 - L2 LINE L2 -653 2661 2533 194 207 17 0 chr5 55721514 55721572 -147363960 + CT-rich Low_complexity Low_complexity 3 61 0 553 325 93 26 chr5 55721622 55721933 -147363599 - L3 LINE CR1 -889 688 357 557 316 107 49 chr5 55723261 55723596 -147361936 + L2 LINE L2 1386 1769 -1545 7411 33 4 1 chr5 55723596 55725181 -147360351 - L1PA4 LINE L1 0 6155 4565 557 316 107 49 chr5 55725181 55725417 -147360115 + L2 LINE L2 1769 1990 -1324 629 328 178 28 chr5 55725659 55726594 -147358938 + L2 LINE L2 2037 3115 -198 883 127 0 7 chr5 55726616 55726758 -147358774 - L1PA15 LINE L1 -1 6164 6024 6979 62 8 0 chr5 55726762 55728413 -147357119 - L1PA8 LINE L1 0 6172 4505 480 185 0 0 chr5 55728413 55728494 -147357038 - L1PA15 LINE L1 -126 6039 5959 358 301 41 55 chr5 55728548 55728694 -147356838 + L2 LINE L2 3168 3311 -2 342 322 68 19 chr5 55728774 55728979 -147356553 - L1MEc LINE L1 -5138 1123 909 352 268 35 95 chr5 55729005 55729374 -147356158 - L1MEc LINE L1 -5204 866 520 230 265 82 31 chr5 55729611 55729709 -147355823 - L1MEc LINE L1 -5582 488 386 239 253 63 32 chr5 55729913 55730008 -147355524 - L1MEc LINE L1 -5903 167 70 2085 118 3 3 chr5 55730180 55730477 -147355055 - AluSp SINE Alu -16 297 1 608 268 19 24 chr5 55730530 55730739 -147354793 + MER46C DNA MER2_type 124 331 -7 962 215 19 63 chr5 55732027 55732297 -147353235 - MIR SINE MIR 0 262 5 206 325 78 39 chr5 55733368 55733574 -147351958 - L2 LINE L2 -844 2470 2257 1950 171 5 60 chr5 55733598 55734012 -147351520 - MLT2C1 LTR ERVL 0 397 7 483 306 118 18 chr5 55734066 55734295 -147351237 + MIR SINE MIR 6 257 -5 667 70 0 0 chr5 55734703 55734789 -147350743 - L1PA7 LINE L1 -9 6145 6060 351 0 0 0 chr5 55736273 55736312 -147349220 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr5 55736719 55736749 -147348783 + AT_rich Low_complexity Low_complexity 1 30 0 350 304 155 5 chr5 55737908 55738102 -147347430 + MIR SINE MIR 23 245 -17 1841 248 58 52 chr5 55739687 55741024 -147344508 - L1 LINE L1 -3748 3817 2558 14918 46 7 1 chr5 55741027 55747029 -147338503 - L1PA4 LINE L1 0 6155 1 359 309 15 0 chr5 55747117 55747253 -147338279 - L1MC/D LINE L1 -1998 5810 5673 1487 314 83 2 chr5 55747257 55747753 -147337779 - MLT1H1 LTR MaLR -8 547 12 237 159 0 0 chr5 55747874 55747918 -147337614 + T-rich Low_complexity Low_complexity 1 44 0 456 267 74 92 chr5 55748768 55748985 -147336547 - MLT1L LTR MaLR -22 546 277 234 148 37 19 chr5 55749470 55749524 -147336008 + CT-rich Low_complexity Low_complexity 2 56 0 224 307 164 36 chr5 55749668 55749808 -147335724 + MIR3 SINE MIR 51 208 0 333 82 0 0 chr5 55749899 55749948 -147335584 + (CAT)n Simple_repeat Simple_repeat 3 51 0 831 174 0 0 chr5 55750386 55750518 -147335014 + AluSg/x SINE Alu 142 273 -39 367 183 65 0 chr5 55751762 55751855 -147333677 + L1MA8 LINE L1 6186 6284 -7 195 42 0 0 chr5 55752723 55752747 -147332785 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5623 60 5 20 chr5 55752747 55753428 -147332104 - L1PA8 LINE L1 -24 6148 5458 2114 122 7 3 chr5 55753428 55753723 -147331809 - AluSg SINE Alu -14 296 1 5623 60 5 20 chr5 55753723 55754517 -147331015 - L1PA8 LINE L1 -714 5458 4697 1952 94 0 21 chr5 55754519 55754807 -147330725 + L1P LINE L1 3762 4043 -2103 210 297 60 77 chr5 55754857 55755039 -147330493 + L2 LINE L2 3111 3289 -24 483 274 29 86 chr5 55755170 55755415 -147330117 - L2 LINE L2 -6 3307 3077 619 247 45 39 chr5 55755512 55755690 -147329842 + MER97b DNA MER1_type? 1 179 -874 2464 74 0 0 chr5 55756284 55756594 -147328938 + AluY SINE Alu 1 310 -1 265 316 115 13 chr5 55757101 55757283 -147328249 + MIR SINE MIR 32 234 -28 251 346 0 0 chr5 55757286 55757393 -147328139 - MIR SINE MIR 0 262 156 349 308 28 0 chr5 55757443 55757550 -147327982 + MIR SINE MIR 84 193 -69 184 224 0 41 chr5 55757595 55757644 -147327888 - MIR SINE MIR -92 170 124 3313 147 75 8 chr5 55757936 55758534 -147326998 + L1MC1 LINE L1 5683 6320 -13 21 71 0 0 chr5 55758679 55758721 -147326811 + AT_rich Low_complexity Low_complexity 1 42 0 1197 306 71 25 chr5 55764180 55765126 -147320406 + L2 LINE L2 2307 3296 -17 925 298 80 71 chr5 55765661 55766312 -147319220 - L2 LINE L2 -391 2923 2267 24 53 0 0 chr5 55766584 55766622 -147318910 + AT_rich Low_complexity Low_complexity 1 38 0 1661 194 10 0 chr5 55767652 55767961 -147317571 - AluJb SINE Alu 0 312 1 286 207 66 41 chr5 55768209 55768330 -147317202 - L1ME4a LINE L1 -157 5964 5841 210 264 38 0 chr5 55769552 55769605 -147315927 + L3b LINE CR1 1307 1361 -222 690 285 43 41 chr5 55770758 55771090 -147314442 - LTR16A LTR ERVL -118 332 1 465 82 0 0 chr5 55771455 55771528 -147314004 - Alu SINE Alu 0 311 239 510 258 79 57 chr5 55772096 55772325 -147313207 - L2 LINE L2 -23 3290 3057 1237 242 30 21 chr5 55772328 55772684 -147312848 - MLT1A1 LTR MaLR 0 396 3 212 316 177 0 chr5 55772712 55772791 -147312741 - L2 LINE L2 -302 3011 2919 2112 223 66 0 chr5 55772792 55773218 -147312314 - MER70A LTR ERVL 0 472 19 1800 271 122 85 chr5 55773224 55774239 -147311293 - L2 LINE L2 -387 2927 1875 207 0 0 0 chr5 55774624 55774647 -147310885 + (T)n Simple_repeat Simple_repeat 1 23 0 923 306 45 56 chr5 55774668 55775132 -147310400 - L3 LINE CR1 -156 1421 963 23 54 0 0 chr5 55775357 55775394 -147310138 + AT_rich Low_complexity Low_complexity 1 37 0 820 217 67 35 chr5 55775748 55776062 -147309470 + L1ME1 LINE L1 5254 5577 -782 3372 227 67 6 chr5 55776101 55776950 -147308582 + L1MC3 LINE L1 6868 7768 -17 1147 278 32 11 chr5 55776940 55777314 -147308218 + L1ME1 LINE L1 5651 6032 -134 * 274 264 11 0 chr5 55777393 55777484 -147308048 + L1ME3 LINE L1 6066 6157 -5 429 274 131 11 chr5 55777673 55777848 -147307684 - L1MDa LINE L1 -5468 1072 877 23 68 0 0 chr5 55777917 55777961 -147307571 + AT_rich Low_complexity Low_complexity 1 44 0 1558 292 87 38 chr5 55777980 55778928 -147306604 - L1ME LINE L1 -4310 1770 744 1587 211 89 18 chr5 55778928 55779364 -147306168 - MLT1C LTR MaLR 0 467 1 1558 292 87 38 chr5 55779364 55780127 -147305405 - L1ME LINE L1 -5336 744 20 1612 167 167 16 chr5 55780144 55780516 -147305016 - MSTA LTR MaLR 0 428 1 273 333 9 0 chr5 55780837 55780948 -147304584 + L1M4 LINE L1 2932 3043 -3103 23 0 0 0 chr5 55782632 55782655 -147302877 + AT_rich Low_complexity Low_complexity 1 23 0 5972 155 47 24 chr5 55784173 55784743 -147300789 - Tigger3b DNA MER2_type -1801 1227 671 2118 126 13 0 chr5 55784743 55785052 -147300480 + AluSq SINE Alu 1 313 0 5972 155 47 24 chr5 55785052 55785680 -147299852 - Tigger3b DNA MER2_type -2357 671 2 1726 144 42 3 chr5 55785767 55786092 -147299440 + AluSx SINE Alu 2 337 0 22 0 0 0 chr5 55786914 55786936 -147298596 + AT_rich Low_complexity Low_complexity 1 22 0 432 310 66 38 chr5 55787092 55787305 -147298227 + L1ME4a LINE L1 5254 5472 -2336 586 284 75 30 chr5 55787348 55787746 -147297786 + L1ME4a LINE L1 5549 5964 -157 1987 119 3 23 chr5 55789674 55789984 -147295548 + AluSx SINE Alu 1 304 -8 225 329 26 13 chr5 55790106 55790182 -147295350 + MIR SINE MIR 20 96 -166 230 111 28 0 chr5 55790202 55790238 -147295294 - L2 LINE L2 -12 3301 3265 264 259 17 0 chr5 55790949 55791007 -147294525 + MIR SINE MIR 27 85 -123 2217 87 3 13 chr5 55791055 55791364 -147294168 + AluY SINE Alu 3 308 -3 885 250 79 0 chr5 55791571 55791787 -147293745 - MIR SINE MIR -21 241 9 453 310 76 12 chr5 55792042 55792213 -147293319 + MIR SINE MIR 80 261 -1 259 382 11 0 chr5 55792503 55792592 -147292940 + L2 LINE L2 2890 2979 -334 250 306 99 0 chr5 55792762 55792873 -147292659 + L2 LINE L2 1632 1753 -1561 26 30 0 0 chr5 55792874 55792907 -147292625 + AT_rich Low_complexity Low_complexity 1 33 0 45 0 0 0 chr5 55794419 55794464 -147291068 + AT_rich Low_complexity Low_complexity 1 45 0 405 135 9 21 chr5 55794467 55794547 -147290985 + L1PA13 LINE L1 6085 6160 -6 22 0 0 0 chr5 55795198 55795220 -147290312 + AT_rich Low_complexity Low_complexity 1 22 0 377 264 123 0 chr5 55795729 55795835 -147289697 - L2 LINE L2 -1 3271 3153 230 332 20 40 chr5 55795864 55796063 -147289469 + L2 LINE L2 2676 2870 -444 229 311 46 77 chr5 55796169 55796365 -147289167 + L2 LINE L2 2997 3186 -86 29 84 0 0 chr5 55797839 55797910 -147287622 + AT_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 55798087 55798108 -147287424 + AT_rich Low_complexity Low_complexity 1 21 0 234 62 0 0 chr5 55798497 55798529 -147287003 + (TC)n Simple_repeat Simple_repeat 2 33 0 323 310 92 42 chr5 55798914 55799153 -147286379 + L2 LINE L2 3063 3313 0 24 53 0 0 chr5 55801891 55801929 -147283603 + AT_rich Low_complexity Low_complexity 1 38 0 1298 179 47 30 chr5 55802626 55802836 -147282696 - AluJo SINE Alu 0 312 116 216 97 0 0 chr5 55802836 55802867 -147282665 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1298 179 47 30 chr5 55802867 55802982 -147282550 - AluJo SINE Alu -196 116 4 202 217 9 9 chr5 55803458 55803564 -147281968 + (TA)n Simple_repeat Simple_repeat 2 107 0 180 125 0 0 chr5 55803728 55803760 -147281772 + (TA)n Simple_repeat Simple_repeat 2 33 0 248 0 31 0 chr5 55803778 55803810 -147281722 + (CA)n Simple_repeat Simple_repeat 2 34 0 272 264 38 66 chr5 55804168 55804274 -147281258 + L2 LINE L2 3139 3241 -31 303 154 0 0 chr5 55804279 55804344 -147281188 + GA-rich Low_complexity Low_complexity 1 65 0 311 276 148 28 chr5 55805533 55805750 -147279782 - L1ME4a LINE L1 -26 6095 5853 335 257 35 35 chr5 55807043 55807156 -147278376 - L2 LINE L2 0 3313 3201 207 318 48 40 chr5 55807545 55807671 -147277861 - L2 LINE L2 0 3313 3187 549 167 50 0 chr5 55810177 55810291 -147275241 + L1ME1 LINE L1 6058 6177 -1 1416 185 16 16 chr5 55810443 55810751 -147274781 - L1MA6 LINE L1 -1 6299 5992 208 360 0 0 chr5 55810827 55810902 -147274630 + L2 LINE L2 3223 3297 -16 754 183 0 8 chr5 55810963 55811094 -147274438 - FLAM_C SINE Alu 0 133 4 30 27 0 0 chr5 55811115 55811152 -147274380 + AT_rich Low_complexity Low_complexity 1 37 0 524 339 69 37 chr5 55812492 55812973 -147272559 + MLT1J LTR MaLR 1 496 -15 25 0 0 0 chr5 55813499 55813524 -147272008 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 55813559 55813580 -147271952 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 55814693 55814719 -147270813 + (TAG)n Simple_repeat Simple_repeat 2 27 0 232 271 0 0 chr5 55814734 55814793 -147270739 - MIR SINE MIR -10 252 194 448 177 13 0 chr5 55814793 55814872 -147270660 - MER116 DNA Mariner 0 80 1 801 207 41 0 chr5 55814872 55815041 -147270491 - MIR SINE MIR -79 183 8 549 246 140 18 chr5 55815050 55815221 -147270311 - MIR SINE MIR -41 221 30 203 360 45 92 chr5 55815515 55815918 -147269614 + L2 LINE L2 996 1379 -1935 555 79 0 0 chr5 55816175 55816251 -147269281 - L1PA8 LINE L1 -221 5910 5835 1832 66 0 0 chr5 55816251 55816492 -147269040 + L1PA8 LINE L1 5925 6168 -4 226 293 30 50 chr5 55816997 55817096 -147268436 + L2 LINE L2 1833 1929 -1385 299 324 46 35 chr5 55817184 55817357 -147268175 - L2 LINE L2 0 3313 3139 1569 140 79 11 chr5 55817386 55817679 -147267853 + AluSx SINE Alu 1 311 0 27 73 0 0 chr5 55819669 55819724 -147265808 + AT_rich Low_complexity Low_complexity 1 55 0 271 59 0 0 chr5 55819964 55819998 -147265534 - HSMAR1 DNA Mariner 0 1287 1254 2444 72 0 0 chr5 55820775 55821080 -147264452 - AluY SINE Alu -6 305 1 290 240 0 10 chr5 55821767 55821863 -147263669 + (TA)n Simple_repeat Simple_repeat 1 95 0 934 301 110 11 chr5 55822491 55823099 -147262433 - Charlie7 DNA MER1_type -1897 715 48 281 328 49 33 chr5 55823190 55823312 -147262220 + L2 LINE L2 3190 3313 0 8100 157 19 30 chr5 55823343 55824314 -147261218 - L1MA4A LINE L1 -7 6296 5316 2138 91 21 7 chr5 55824314 55824601 -147260931 - AluSg SINE Alu -19 291 1 8100 157 19 30 chr5 55824601 55826288 -147259244 - L1MA4A LINE L1 -987 5316 3663 27 49 0 0 chr5 55826456 55826497 -147259035 + AT_rich Low_complexity Low_complexity 1 41 0 26 74 0 0 chr5 55826629 55826683 -147258849 + AT_rich Low_complexity Low_complexity 1 54 0 203 88 29 0 chr5 55828421 55828455 -147257077 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 1688 181 27 40 chr5 55828681 55828826 -147256706 + MLT1A1 LTR MaLR 1 146 -219 2409 57 0 19 chr5 55828826 55829142 -147256390 + AluY SINE Alu 1 310 -1 1688 181 27 40 chr5 55829142 55829366 -147256166 + MLT1A1 LTR MaLR 146 365 0 777 278 39 54 chr5 55829395 55829590 -147255942 - L1ME3A LINE L1 -214 5939 5750 1990 104 21 7 chr5 55829590 55829879 -147255653 - AluSq SINE Alu -20 293 1 777 278 39 54 chr5 55829879 55830017 -147255515 - L1ME3A LINE L1 -403 5750 5611 309 327 18 12 chr5 55830033 55830201 -147255331 - L1ME3A LINE L1 -1035 5094 4926 24 32 0 0 chr5 55830261 55830292 -147255240 + AT_rich Low_complexity Low_complexity 1 31 0 376 294 65 75 chr5 55830713 55831098 -147254434 - L1ME3A LINE L1 -4961 1158 778 246 229 0 0 chr5 55831823 55831893 -147253639 + (TA)n Simple_repeat Simple_repeat 2 71 0 184 227 0 27 chr5 55831953 55832028 -147253504 + GA-rich Low_complexity Low_complexity 2 74 0 21 0 0 0 chr5 55832088 55832109 -147253423 + AT_rich Low_complexity Low_complexity 1 21 0 253 340 54 44 chr5 55832138 55832384 -147253148 + L1ME4a LINE L1 5507 5758 -2050 2051 144 8 27 chr5 55832384 55832752 -147252780 + MER46B DNA MER2_type 1 236 0 253 340 54 44 chr5 55832752 55832802 -147252730 + L1ME4a LINE L1 5758 5806 -2002 267 256 164 39 chr5 55833156 55833468 -147252064 + L1ME4a LINE L1 5767 6117 -4 275 0 0 28 chr5 55834053 55834089 -147251443 + (CA)n Simple_repeat Simple_repeat 2 36 0 243 0 0 0 chr5 55835329 55835356 -147250176 + (TA)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 55835506 55835534 -147249998 + AT_rich Low_complexity Low_complexity 1 28 0 208 224 313 0 chr5 55838399 55838466 -147247066 + L3b LINE CR1 1362 1449 -134 342 317 85 20 chr5 55839984 55840183 -147245349 + MIR SINE MIR 37 248 -14 350 308 120 0 chr5 55842646 55842779 -147242753 - MIR3 SINE MIR -40 168 20 2727 234 94 14 chr5 55843686 55844312 -147241220 - L1MD2 LINE L1 -214 6539 5804 2266 155 39 101 chr5 55844312 55844811 -147240721 + MER44D DNA MER2_type 1 515 -1972 237 65 0 0 chr5 55844811 55844842 -147240690 + (CA)n Simple_repeat Simple_repeat 2 32 0 2266 155 39 101 chr5 55844842 55844928 -147240604 + MER44D DNA MER2_type 515 605 0 2727 234 94 14 chr5 55844928 55845278 -147240254 - L1MD2 LINE L1 -949 5804 5483 290 118 59 0 chr5 55845278 55845329 -147240203 - MADE1 DNA Mariner -25 55 2 4137 249 27 51 chr5 55845346 55846923 -147238609 - L1MD2 LINE L1 -1374 5166 3628 2376 160 10 22 chr5 55846930 55847342 -147238190 - MLT2D LTR ERVL -7 407 1 1250 221 47 8 chr5 55847344 55847706 -147237826 - L1MD2 LINE L1 -2907 3633 3258 3558 243 75 16 chr5 55847739 55848740 -147236792 - L1MD2 LINE L1 -4898 1642 583 180 0 0 0 chr5 55848742 55848762 -147236770 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 288 0 0 0 chr5 55848761 55848793 -147236739 + (CA)n Simple_repeat Simple_repeat 1 32 0 323 396 58 16 chr5 55849777 55850211 -147235321 - L1MC4a LINE L1 -1959 5849 5398 231 297 138 14 chr5 55850219 55850495 -147235037 - L1MC4a LINE L1 -757 5389 5080 24 53 0 0 chr5 55850560 55850598 -147234934 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 55850913 55850935 -147234597 + AT_rich Low_complexity Low_complexity 1 22 0 1701 209 30 70 chr5 55853297 55853771 -147231761 + MLT1C LTR MaLR 13 467 0 614 285 84 18 chr5 55853967 55854241 -147231291 + L2 LINE L2 2924 3215 -98 1733 241 58 24 chr5 55855508 55855960 -147229572 - MLT2B1 LTR ERVL -53 467 1 21 71 0 0 chr5 55856770 55856812 -147228720 + AT_rich Low_complexity Low_complexity 1 42 0 950 218 23 5 chr5 55857240 55857460 -147228072 + MER58A DNA MER1_type 1 224 0 30 0 0 0 chr5 55857795 55857825 -147227707 + AT_rich Low_complexity Low_complexity 1 30 0 347 345 72 30 chr5 55858759 55859092 -147226440 - L1ME4a LINE L1 -3 6118 5772 1009 176 38 25 chr5 55859179 55859417 -147226115 - L1MB7 LINE L1 0 6184 5944 3257 235 59 34 chr5 55859417 55861341 -147224191 + L1MCb LINE L1 671 2851 -3894 4158 238 52 27 chr5 55861352 55862829 -147222703 + L1MCb LINE L1 2917 4430 -2134 720 173 39 130 chr5 55862905 55863159 -147222373 - MLT1C LTR MaLR -169 298 68 3792 54 4 0 chr5 55863292 55863770 -147221762 + L1PA7 LINE L1 5675 6154 0 1928 244 59 55 chr5 55863773 55865127 -147220405 + L1M2 LINE L1 2558 3831 -3734 312 120 105 8 chr5 55865143 55865276 -147220256 + (ATATG)n Simple_repeat Simple_repeat 2 147 0 394 133 0 92 chr5 55865281 55865477 -147220055 + (TA)n Simple_repeat Simple_repeat 2 179 0 247 64 160 6 chr5 55865495 55865651 -147219881 + (ATATG)n Simple_repeat Simple_repeat 1 180 0 280 170 78 39 chr5 55865661 55865945 -147219587 + (ATGTG)n Simple_repeat Simple_repeat 1 295 0 184 91 78 26 chr5 55865956 55866033 -147219499 + (ATATG)n Simple_repeat Simple_repeat 2 82 0 850 257 32 8 chr5 55866062 55866311 -147219221 + L1M2 LINE L1 3818 4072 -3493 295 204 34 11 chr5 55866345 55866433 -147219099 + L1MC4 LINE L1 6614 6703 -1339 4571 211 32 11 chr5 55866487 55867605 -147217927 + L1M2 LINE L1 4066 5207 -2358 2345 81 39 0 chr5 55867605 55867940 -147217592 + L1PA7 LINE L1 5806 6153 -1 2887 159 18 38 chr5 55867942 55868497 -147217035 - Tigger3b DNA MER2_type -686 545 2 4094 261 78 20 chr5 55868582 55868809 -147216723 - L1M4c LINE L1 -4551 2408 2196 327 25 0 0 chr5 55868809 55868849 -147216683 + (TG)n Simple_repeat Simple_repeat 2 41 0 4094 261 78 20 chr5 55868849 55870580 -147214952 - L1M4c LINE L1 -4763 2196 345 2214 110 15 0 chr5 55870608 55870934 -147214598 - L1PA15 LINE L1 0 6165 5835 200 348 130 0 chr5 55871017 55871109 -147214423 - L2 LINE L2 -16 3256 3153 206 362 49 32 chr5 55871115 55871300 -147214232 - MER5A DNA MER1_type -1 188 1 252 333 32 11 chr5 55872763 55872856 -147212676 + L2 LINE L2 3178 3272 0 218 286 71 32 chr5 55875014 55875140 -147210392 - MIR SINE MIR -14 248 118 22 35 0 0 chr5 55875282 55875311 -147210221 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 55877215 55877236 -147208296 + AT_rich Low_complexity Low_complexity 1 21 0 317 287 69 0 chr5 55877393 55877480 -147208052 - L2 LINE L2 -12 3260 3168 1353 164 11 0 chr5 55877713 55877982 -147207550 + L1MA4 LINE L1 6023 6294 -6 22 35 0 0 chr5 55877989 55878018 -147207514 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 55879023 55879061 -147206471 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 55879292 55879330 -147206202 + AT_rich Low_complexity Low_complexity 1 38 0 559 158 42 0 chr5 55881000 55881120 -147204412 - L1MA7 LINE L1 -11 6280 6156 27 62 0 0 chr5 55881260 55881308 -147204224 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr5 55884185 55884206 -147201326 + AT_rich Low_complexity Low_complexity 1 21 0 224 200 0 0 chr5 55885282 55885322 -147200210 + (ATG)n Simple_repeat Simple_repeat 3 42 0 370 315 162 44 chr5 55886260 55886778 -147198754 + L1ME4a LINE L1 3954 4529 -1617 271 398 0 0 chr5 55887168 55887271 -147198261 + L2 LINE L2 3192 3294 -19 25 105 0 0 chr5 55887300 55887395 -147198137 + AT_rich Low_complexity Low_complexity 1 95 0 7214 44 0 0 chr5 55887682 55888963 -147196569 - L1PA5 LINE L1 -6 6148 4867 22 70 0 0 chr5 55889112 55889155 -147196377 + AT_rich Low_complexity Low_complexity 1 43 0 411 323 97 26 chr5 55889182 55889532 -147196000 + L1ME4a LINE L1 5482 5856 -265 262 297 42 33 chr5 55889537 55889749 -147195783 + L1ME4a LINE L1 5892 6105 -16 1244 124 62 44 chr5 55890079 55890185 -147195347 + MER30 DNA MER1_type 1 104 -126 198 0 0 0 chr5 55890185 55890207 -147195325 + (TAA)n Simple_repeat Simple_repeat 3 24 0 1244 124 62 44 chr5 55890207 55890326 -147195206 + MER30 DNA MER1_type 104 230 0 2208 104 20 0 chr5 55891426 55891724 -147193808 + AluSq SINE Alu 1 304 -9 210 71 0 0 chr5 55892571 55892599 -147192933 + (TA)n Simple_repeat Simple_repeat 1 28 0 343 221 0 158 chr5 55892842 55892969 -147192563 - MER102b DNA MER1_type -2 339 233 369 317 87 29 chr5 55893317 55893525 -147192007 - L3 LINE CR1 -10 1567 1348 571 289 61 31 chr5 55893555 55893783 -147191749 - MIR SINE MIR -20 242 8 1311 217 22 50 chr5 55894126 55894448 -147191084 + L1MCa LINE L1 19 331 -6095 304 132 0 38 chr5 55894485 55894538 -147190994 + MSTC LTR MaLR 1 51 -377 803 221 54 68 chr5 55894543 55894823 -147190709 + MLT1A1 LTR MaLR 1 276 -89 1084 243 25 4 chr5 55894823 55895062 -147190470 + L1MCa LINE L1 386 629 -5797 1526 98 31 21 chr5 55895220 55895490 -147190042 + THE1B LTR MaLR 1 362 -2 261 0 0 0 chr5 55895573 55895602 -147189930 + (CA)n Simple_repeat Simple_repeat 1 29 0 263 323 21 21 chr5 55895999 55896092 -147189440 - MIR SINE MIR -150 112 20 1480 164 120 23 chr5 55896110 55896452 -147189080 + THE1C LTR MaLR 1 375 0 227 305 98 24 chr5 55896644 55896769 -147188763 + MIR SINE MIR 21 157 -61 361 284 77 91 chr5 55897244 55897653 -147187879 + L1MC3 LINE L1 52 793 -5629 2139 276 77 39 chr5 55897840 55898793 -147186739 + L1MC3 LINE L1 814 1730 -5211 524 56 14 0 chr5 55898793 55898865 -147186667 + (TA)n Simple_repeat Simple_repeat 2 74 0 1848 156 7 3 chr5 55898867 55899155 -147186377 - AluSx SINE Alu -23 289 1 2139 276 77 39 chr5 55899155 55900448 -147185084 + L1MC3 LINE L1 1730 3303 -3638 746 241 39 9 chr5 55900422 55900704 -147184828 + L1MC3 LINE L1 4278 4571 -2370 * 266 92 46 15 chr5 55900733 55900798 -147184734 + (TA)n Simple_repeat Simple_repeat 2 68 0 378 0 0 0 chr5 55900798 55900840 -147184692 + (GA)n Simple_repeat Simple_repeat 2 43 0 1581 165 53 7 chr5 55900860 55901145 -147184387 + AluJo SINE Alu 14 311 -1 1965 241 56 58 chr5 55901164 55902763 -147182769 + L1MC3 LINE L1 4584 6334 -627 523 184 0 0 chr5 55902819 55902906 -147182626 + Tigger5 DNA MER2_type 2237 2323 0 3827 263 117 61 chr5 55902913 55903879 -147181653 + L1MC3 LINE L1 6333 7243 -1337 399 21 0 0 chr5 55903879 55903927 -147181605 + (TG)n Simple_repeat Simple_repeat 2 49 0 3827 263 117 61 chr5 55903927 55904317 -147181215 + L1MC3 LINE L1 7243 7610 -970 216 0 0 0 chr5 55904317 55904341 -147181191 + (TA)n Simple_repeat Simple_repeat 2 25 0 3827 263 117 61 chr5 55904341 55904474 -147181058 + L1MC3 LINE L1 7610 7734 -846 276 220 17 0 chr5 55904474 55904533 -147180999 + MLT1F1 LTR MaLR 28 87 -480 3827 263 117 61 chr5 55904533 55905037 -147180495 + L1MC3 LINE L1 7734 8502 -78 26 30 0 0 chr5 55905416 55905449 -147180083 + AT_rich Low_complexity Low_complexity 1 33 0 417 335 111 8 chr5 55906889 55906959 -147178573 - L2 LINE L2 -245 3068 3007 2463 53 0 10 chr5 55906959 55907262 -147178270 + AluY SINE Alu 1 300 -11 417 335 111 8 chr5 55907262 55907535 -147177997 - L2 LINE L2 -306 3007 2686 296 238 0 50 chr5 55908279 55908359 -147177173 - MER91B DNA MER1_type -28 162 87 260 163 0 0 chr5 55908374 55908423 -147177109 - MER91B DNA MER1_type -60 130 82 214 318 15 15 chr5 55908734 55908800 -147176732 - MIR3 SINE MIR -138 70 5 354 61 0 0 chr5 55909758 55909807 -147175725 + (TC)n Simple_repeat Simple_repeat 1 49 0 380 230 90 0 chr5 55911380 55911480 -147174052 + MER5B DNA MER1_type 65 173 -5 23 0 0 0 chr5 55911855 55911878 -147173654 + AT_rich Low_complexity Low_complexity 1 23 0 2268 98 0 13 chr5 55913873 55914178 -147171354 - AluSx SINE Alu -11 301 1 1926 92 60 14 chr5 55914363 55914646 -147170886 - AluSq SINE Alu -17 296 1 386 248 114 0 chr5 55914728 55914833 -147170699 - MIR3 SINE MIR -5 203 87 2095 115 6 19 chr5 55915057 55915370 -147170162 - AluSq SINE Alu -4 309 1 2147 116 10 3 chr5 55917741 55918043 -147167489 - AluSq SINE Alu -9 304 1 836 52 0 0 chr5 55918976 55919073 -147166459 - AluY SINE Alu -18 293 197 2327 89 3 10 chr5 55919073 55919377 -147166155 - AluY SINE Alu -8 303 2 353 370 27 0 chr5 55919574 55919720 -147165812 - MIR SINE MIR -6 256 107 311 255 104 19 chr5 55920003 55920109 -147165423 + MIR SINE MIR 56 170 -92 290 246 286 35 chr5 55920830 55921029 -147164503 + L3 LINE CR1 254 502 -1075 868 98 15 30 chr5 55921047 55921180 -147164352 - FLAM_C SINE Alu 0 133 3 1299 221 138 52 chr5 55922204 55922708 -147162824 + MLT1E2 LTR MaLR 19 600 -26 2461 129 16 16 chr5 55922708 55923072 -147162460 + THE1B LTR MaLR 1 364 0 1299 221 138 52 chr5 55923072 55923102 -147162430 + MLT1E2 LTR MaLR 600 626 0 297 247 108 21 chr5 55923498 55923591 -147161941 + MLT1J2 LTR MaLR 48 148 -302 200 269 19 19 chr5 55924037 55924141 -147161391 + (TTAA)n Simple_repeat Simple_repeat 2 105 0 32 81 0 0 chr5 55926243 55926317 -147159215 + AT_rich Low_complexity Low_complexity 1 74 0 368 335 147 42 chr5 55927625 55927664 -147157868 - L2 LINE L2 -36 3277 3244 356 59 20 0 chr5 55927664 55927715 -147157817 + (CA)n Simple_repeat Simple_repeat 2 53 0 368 335 147 42 chr5 55927715 55928233 -147157299 - L2 LINE L2 -69 3244 2660 783 254 80 31 chr5 55928239 55928529 -147157003 - MLT1F LTR MaLR -2 553 258 4897 47 9 26 chr5 55928660 55929342 -147156190 - L1P LINE L1 -914 5232 4563 567 323 187 29 chr5 55929881 55930773 -147154759 + L2 LINE L2 2037 3074 -239 937 128 0 7 chr5 55930838 55930979 -147154553 - L1PA15 LINE L1 -2 6163 6024 3007 117 25 10 chr5 55930983 55931463 -147154069 - L1PA8 LINE L1 0 6172 5686 1347 209 70 19 chr5 55931702 55932061 -147153471 + L1ME1 LINE L1 4890 5266 -880 1890 85 0 12 chr5 55932074 55932320 -147153212 + AluY SINE Alu 56 298 -13 2303 96 3 3 chr5 55932323 55932624 -147152908 + AluSx SINE Alu 3 303 -9 2844 216 51 16 chr5 55932646 55933335 -147152197 + L1ME1 LINE L1 5449 6161 -5 539 243 41 83 chr5 55933590 55933759 -147151773 + MER58A DNA MER1_type 24 185 -39 23959 55 2 2 chr5 55933983 55937026 -147148506 + L1P LINE L1 2170 5213 -933 2049 73 11 18 chr5 55939378 55939650 -147145882 - AluY SINE Alu -41 270 1 2246 77 24 0 chr5 55939716 55940003 -147145529 - AluY SINE Alu -9 302 9 963 268 80 31 chr5 55940081 55940532 -147145000 + L2 LINE L2 2818 3290 -23 2227 74 0 0 chr5 55940648 55940918 -147144614 + AluSx SINE Alu 31 300 -12 677 71 12 0 chr5 55941303 55941387 -147144145 + AluS SINE Alu 1 85 -227 1251 58 58 0 chr5 55941387 55941543 -147143989 + AluY SINE Alu 134 298 -13 2052 142 0 7 chr5 55941726 55942029 -147143503 + AluSx SINE Alu 1 301 -11 3711 127 45 25 chr5 55944849 55945626 -147139906 - L1PA12 LINE L1 -295 5873 5077 746 261 55 21 chr5 55945755 55945993 -147139539 - MIR SINE MIR -12 250 5 544 163 12 4 chr5 55947080 55947175 -147138357 + MLT1A1 LTR MaLR 1 96 -278 1470 209 32 90 chr5 55947183 55947560 -147137972 + MLT1A1 LTR MaLR 11 365 0 809 226 71 31 chr5 55947584 55947810 -147137722 + MLT1A1 LTR MaLR 122 356 -9 448 287 27 13 chr5 55947888 55948038 -147137494 + MIR SINE MIR 110 261 -1 2342 237 87 20 chr5 55948846 55949537 -147135995 - L1ME2 LINE L1 0 6164 5428 2529 70 0 0 chr5 55949802 55950101 -147135431 - AluY SINE Alu -12 299 1 23 0 0 0 chr5 55950190 55950213 -147135319 + AT_rich Low_complexity Low_complexity 1 23 0 2112 121 104 27 chr5 55950355 55950693 -147134839 - THE1B LTR MaLR 0 364 1 738 158 85 28 chr5 55950765 55950942 -147134590 + MER53 DNA DNA 2 188 -1 983 119 5 133 chr5 55951135 55951353 -147134179 - MLT1B LTR MaLR -2 388 199 301 284 74 0 chr5 55951642 55951737 -147133795 + L2 LINE L2 3204 3305 -8 23 0 0 0 chr5 55951739 55951762 -147133770 + AT_rich Low_complexity Low_complexity 1 23 0 696 83 57 6 chr5 55952828 55952985 -147132547 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 279 122 0 0 chr5 55953204 55953253 -147132279 + (TG)n Simple_repeat Simple_repeat 2 50 0 253 197 30 15 chr5 55954254 55954320 -147131212 + CT-rich Low_complexity Low_complexity 1 67 0 2345 169 38 38 chr5 55954769 55955195 -147130337 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr5 55955208 55955230 -147130302 + AT_rich Low_complexity Low_complexity 1 22 0 2223 94 42 0 chr5 55955281 55955569 -147129963 + AluSx SINE Alu 1 300 -12 11681 149 32 35 chr5 55957622 55959746 -147125786 + Tigger1 DNA MER2_type 2 2119 -299 14547 45 5 2 chr5 55959850 55965858 -147119674 - L1PA3 LINE L1 -4 6151 1 242 320 20 0 chr5 55965946 55966046 -147119486 - L1MC/D LINE L1 -1998 5810 5709 1985 293 113 65 chr5 55966231 55967994 -147117538 - HAL1 LINE L1 -447 2060 213 * 5431 226 43 13 chr5 55967988 55969846 -147115686 + L1MC/D LINE L1 3713 5627 -706 334 295 47 78 chr5 55969846 55970039 -147115493 - HAL1 LINE L1 -2282 225 39 2087 8 0 8 chr5 55970593 55970829 -147114703 + AluY SINE Alu 70 303 -8 269 288 8 68 chr5 55970853 55970971 -147114561 - L2 LINE L2 0 3313 3203 186 43 0 0 chr5 55971377 55971400 -147114132 + (T)n Simple_repeat Simple_repeat 1 23 0 28 0 0 0 chr5 55971996 55972024 -147113508 + AT_rich Low_complexity Low_complexity 1 28 0 571 244 26 0 chr5 55972026 55972295 -147113237 - L1ME1 LINE L1 -9 6157 5812 232 272 29 44 chr5 55974276 55974412 -147111120 + L1MEd LINE L1 941 1074 -5045 204 40 0 0 chr5 55975414 55975439 -147110093 + (CTG)n Simple_repeat Simple_repeat 2 26 0 208 282 28 0 chr5 55975666 55975737 -147109795 + T-rich Low_complexity Low_complexity 4 76 0 229 194 45 30 chr5 55975752 55975819 -147109713 + LTR16A1 LTR ERVL 388 455 -2 1744 146 26 79 chr5 55976156 55976388 -147109144 + L1MA5 LINE L1 5906 6110 -190 1964 113 25 0 chr5 55976388 55976720 -147108812 - AluSg SINE Alu 0 339 1 1744 146 26 79 chr5 55976720 55976902 -147108630 + L1MA5 LINE L1 6110 6300 0 180 125 0 0 chr5 55977046 55977078 -147108454 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 1543 175 35 7 chr5 55977218 55977503 -147108029 + AluJb SINE Alu 1 293 -19 562 86 0 0 chr5 55978752 55978833 -147106699 - L1PA5 LINE L1 0 6154 6074 1514 178 14 11 chr5 55980195 55980481 -147105051 + AluJb SINE Alu 1 287 -25 319 293 47 26 chr5 55980772 55980963 -147104569 + HAL1 LINE L1 1429 1623 -884 6781 62 3 4 chr5 55981099 55982470 -147103062 + L1PA7 LINE L1 4783 6152 -2 310 304 94 7 chr5 55982773 55982911 -147102621 - L1MDa LINE L1 -3942 2598 2449 240 322 0 0 chr5 55983587 55983677 -147101855 + L1MC4 LINE L1 6614 6703 -1339 * 256 311 0 0 chr5 55983629 55983719 -147101813 - L1MC4 LINE L1 -1339 6703 6614 * 268 235 0 78 chr5 55983715 55983817 -147101715 + L1MC4 LINE L1 6614 6707 -1335 456 163 23 0 chr5 55983819 55983948 -147101584 + (TA)n Simple_repeat Simple_repeat 2 133 0 223 125 50 0 chr5 55984184 55984224 -147101308 + (TATG)n Simple_repeat Simple_repeat 3 44 0 463 317 0 73 chr5 55985059 55985264 -147100268 + MIR3 SINE MIR 16 205 -3 198 0 0 0 chr5 55985308 55985330 -147100202 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 204 167 24 0 chr5 55985827 55985869 -147099663 + A-rich Low_complexity Low_complexity 4 46 0 324 70 0 0 chr5 55986013 55986056 -147099476 + (TA)n Simple_repeat Simple_repeat 1 43 0 1897 111 8 0 chr5 55986056 55986317 -147099215 - AluSg SINE Alu -17 293 31 962 212 38 5 chr5 55986953 55987165 -147098367 - MER58A DNA MER1_type 0 224 6 916 91 8 0 chr5 55987841 55987962 -147097570 + AluSp SINE Alu 11 132 -181 1412 215 7 23 chr5 56088107 56088409 -146997123 - AluJo SINE Alu -10 302 6 311 0 26 0 chr5 56089113 56089152 -146996380 + (CA)n Simple_repeat Simple_repeat 2 41 0 440 300 123 62 chr5 56089212 56089775 -146995757 - L1M4 LINE L1 -1302 4844 4248 256 284 81 56 chr5 56089836 56090033 -146995499 - L1M4 LINE L1 -1998 4148 3947 262 119 0 68 chr5 56090052 56090111 -146995421 + MLT1A1 LTR MaLR 295 349 -16 185 236 16 163 chr5 56091676 56091799 -146993733 - L2 LINE L2 -33 3280 3176 683 102 37 9 chr5 56091901 56092009 -146993523 + MSTB LTR MaLR 305 415 -11 312 330 140 48 chr5 56092087 56092445 -146993087 + LTR33A LTR ERVL 30 420 -103 1181 139 4 69 chr5 56092869 56093006 -146992526 - MER50 LTR ERV1 -34 700 584 2618 3 3 7 chr5 56093006 56093302 -146992230 + AluYa5 SINE Alu 1 295 -16 1181 139 4 69 chr5 56093302 56093409 -146992123 - MER50 LTR ERV1 -150 584 472 180 0 0 0 chr5 56093420 56093440 -146992092 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 388 204 97 26 chr5 56093555 56093668 -146991864 - MIR SINE MIR -105 157 37 269 348 11 0 chr5 56093926 56094018 -146991514 + L2 LINE L2 1700 1792 -1522 1056 232 15 126 chr5 56094078 56094475 -146991057 + MLT1A2 LTR MaLR 22 374 0 256 329 65 52 chr5 56094514 56094745 -146990787 + L2 LINE L2 1872 2105 -1209 409 326 87 0 chr5 56095106 56095290 -146990242 + MIR SINE MIR 3 202 -60 1176 125 45 40 chr5 56095621 56095821 -146989711 - MLT1A1 LTR MaLR -164 201 1 200 313 96 43 chr5 56096230 56096345 -146989187 - L2 LINE L2 -5 3308 3188 2160 110 3 0 chr5 56096687 56096988 -146988544 - AluSg SINE Alu -8 302 1 1977 140 14 49 chr5 56097082 56097432 -146988100 + MER7A DNA MER2_type 2 337 -9 324 83 0 0 chr5 56097631 56097679 -146987853 + (TG)n Simple_repeat Simple_repeat 2 49 0 189 147 0 0 chr5 56098806 56098840 -146986692 + (T)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 56098941 56098969 -146986563 + AT_rich Low_complexity Low_complexity 1 28 0 2146 124 0 0 chr5 56099958 56100257 -146985275 + AluSq SINE Alu 1 299 -14 252 221 151 12 chr5 56101781 56101867 -146983665 + MER46C DNA MER2_type 16 113 -225 2110 146 62 42 chr5 56102057 56102299 -146983233 - L1MA9 LINE L1 0 6312 6056 1080 216 52 104 chr5 56102299 56102684 -146982848 - MLT1A1 LTR MaLR 0 365 1 2110 146 62 42 chr5 56102684 56102874 -146982658 - L1MA9 LINE L1 -256 6056 5871 441 258 92 0 chr5 56102913 56103033 -146982499 + MER46C DNA MER2_type 200 330 -8 1790 158 71 11 chr5 56103357 56103711 -146981821 - THE1C LTR MaLR 0 375 1 29 60 0 0 chr5 56105602 56105652 -146979880 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr5 56105891 56105922 -146979610 + AT_rich Low_complexity Low_complexity 1 31 0 23 68 0 0 chr5 56105972 56106016 -146979516 + AT_rich Low_complexity Low_complexity 1 44 0 180 111 0 0 chr5 56106816 56106843 -146978689 + (T)n Simple_repeat Simple_repeat 1 27 0 8008 105 3 1 chr5 56107693 56109699 -146975833 - L1PA7 LINE L1 -4 6150 4143 180 333 0 0 chr5 56109806 56109866 -146975666 - MIR SINE MIR -2 260 201 12103 139 16 16 chr5 56111129 56113117 -146972415 + Tigger1 DNA MER2_type 2 1988 -430 283 258 22 118 chr5 56113392 56113570 -146971962 + L1ME1 LINE L1 38 198 -6198 * 485 264 36 6 chr5 56113556 56113723 -146971809 + L1ME1 LINE L1 3361 3532 -2683 207 316 70 0 chr5 56113988 56114045 -146971487 + L2 LINE L2 3207 3267 -5 421 339 70 4 chr5 56114056 56114286 -146971246 + MIR SINE MIR 16 260 -2 5963 156 66 9 chr5 56114287 56115450 -146970082 - Tigger3b DNA MER2_type -1 1230 1 2781 228 32 25 chr5 56115662 56116380 -146969152 + L1ME1 LINE L1 5466 6188 -47 218 288 65 72 chr5 56116930 56117083 -146968449 - L2 LINE L2 -1036 2278 2127 225 159 0 0 chr5 56117091 56117135 -146968397 + (TG)n Simple_repeat Simple_repeat 2 45 0 207 100 0 0 chr5 56120117 56120147 -146965385 + (A)n Simple_repeat Simple_repeat 1 30 0 2351 62 0 0 chr5 56121020 56121311 -146964221 + AluY SINE Alu 21 311 0 391 348 49 44 chr5 56122045 56122249 -146963283 + MIR SINE MIR 1 205 -57 1804 271 44 17 chr5 56122506 56123140 -146962392 + L1MC4 LINE L1 6931 7581 -461 316 198 8 8 chr5 56123237 56123358 -146962174 + (TA)n Simple_repeat Simple_repeat 1 121 0 310 204 80 45 chr5 56123443 56123531 -146962001 + L1MC4 LINE L1 6613 6703 -1339 189 0 0 0 chr5 56123531 56123552 -146961980 + (TA)n Simple_repeat Simple_repeat 1 21 0 315 221 35 21 chr5 56123609 56123754 -146961778 + (TA)n Simple_repeat Simple_repeat 1 147 0 424 144 0 113 chr5 56123812 56123909 -146961623 + L1MC4 LINE L1 7956 8041 -1 294 224 0 26 chr5 56123913 56123989 -146961543 + MIR SINE MIR 186 259 -3 328 325 35 0 chr5 56124757 56124871 -146960661 + MIR SINE MIR 46 163 -99 32 43 0 0 chr5 56125185 56125231 -146960301 + AT_rich Low_complexity Low_complexity 1 46 0 357 277 223 5 chr5 56125975 56126181 -146959351 + MIR SINE MIR 10 260 -2 223 230 115 53 chr5 56126195 56126308 -146959224 + MIR SINE MIR 73 192 -70 347 336 0 33 chr5 56126646 56126768 -146958764 - L2 LINE L2 0 3272 3155 669 345 34 0 chr5 56126868 56127106 -146958426 - MIR SINE MIR 0 262 17 1970 116 0 33 chr5 56127692 56127994 -146957538 + AluSx SINE Alu 1 292 -20 25 0 0 0 chr5 56128832 56128857 -146956675 + AT_rich Low_complexity Low_complexity 1 25 0 5528 40 1 3 chr5 56129112 56129789 -146955743 - L1PA5 LINE L1 -2 6152 5477 1103 159 46 102 chr5 56130066 56130440 -146955092 - L1MB8 LINE L1 -16 6162 5878 2052 198 24 0 chr5 56130440 56130819 -146954713 - L1M2 LINE L1 -6454 395 8 3668 104 39 83 chr5 56130819 56131514 -146954018 + MER4A LTR ERV1 1 664 0 481 337 107 63 chr5 56131849 56132173 -146953359 + L2 LINE L2 1993 2301 -1013 2138 108 0 41 chr5 56132173 56132487 -146953045 + AluSx SINE Alu 1 301 -11 481 337 107 63 chr5 56132487 56132845 -146952687 + L2 LINE L2 2301 2705 -609 313 305 135 7 chr5 56133035 56133176 -146952356 + L2 LINE L2 3155 3313 0 219 289 26 0 chr5 56133465 56133541 -146951991 + L2 LINE L2 3001 3078 -194 1081 219 0 9 chr5 56133981 56134196 -146951336 + AluJb SINE Alu 87 299 -13 287 346 44 13 chr5 56134361 56134520 -146951012 - LTR16C LTR ERVL -116 375 212 396 252 96 15 chr5 56134677 56134812 -146950720 - MER20B DNA MER1_type -636 147 2 514 97 0 0 chr5 56135548 56135620 -146949912 + AluS SINE Alu 1 72 -241 734 60 10 0 chr5 56135620 56135720 -146949812 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 23 54 0 0 chr5 56139080 56139117 -146946415 + AT_rich Low_complexity Low_complexity 1 37 0 237 281 214 0 chr5 56140211 56140300 -146945232 + MER63A DNA MER1_type 103 210 0 2172 216 92 73 chr5 56140464 56141371 -146944161 + L1MC4 LINE L1 6958 7881 -161 287 262 0 87 chr5 56141446 56141595 -146943937 + L1MC4 LINE L1 7892 8027 -15 359 322 88 71 chr5 56141750 56142045 -146943487 - L2 LINE L2 -41 3231 2932 485 289 46 112 chr5 56142063 56142322 -146943210 + MIR SINE MIR 2 251 -11 416 297 34 57 chr5 56142927 56143136 -146942396 + MIR SINE MIR 3 206 -56 249 196 0 0 chr5 56143151 56143202 -146942330 + (ATGGTG)n Simple_repeat Simple_repeat 4 54 0 195 402 71 0 chr5 56143228 56143355 -146942177 - L2 LINE L2 -1 3271 3136 193 328 16 0 chr5 56143889 56143953 -146941579 - MER5B DNA MER1_type -24 154 90 279 274 0 32 chr5 56144107 56144169 -146941363 - MIR SINE MIR -133 75 16 429 302 73 24 chr5 56146427 56146675 -146938857 - MIR SINE MIR 0 262 3 290 346 75 13 chr5 56146818 56146977 -146938555 + MIR3 SINE MIR 33 201 -7 242 193 18 0 chr5 56148368 56148425 -146937107 + (TG)n Simple_repeat Simple_repeat 2 59 0 219 279 0 58 chr5 56148720 56148806 -146936726 + GA-rich Low_complexity Low_complexity 2 82 0 2308 138 23 23 chr5 56149113 56149542 -146935990 + L1MA7 LINE L1 5863 6291 0 1263 275 124 43 chr5 56149736 56150239 -146935293 - MLT1F LTR MaLR 0 593 1 1216 191 138 3 chr5 56150677 56150997 -146934535 - MLT1A1 LTR MaLR 0 365 3 208 404 58 14 chr5 56151257 56151465 -146934067 + L2 LINE L2 2254 2470 -844 403 365 41 14 chr5 56151470 56151615 -146933917 + MER91A DNA MER1_type 4 152 -44 32 67 0 0 chr5 56154339 56154399 -146931133 + AT_rich Low_complexity Low_complexity 1 60 0 857 159 8 5 chr5 56156130 56156280 -146929252 + MLT1A1 LTR MaLR 232 365 0 1128 316 34 12 chr5 56156702 56157120 -146928412 - LTR16A LTR ERVL -8 442 16 212 250 0 57 chr5 56157183 56157271 -146928261 + L2 LINE L2 3116 3198 -115 585 308 32 18 chr5 56157620 56157899 -146927633 + L1MC4a LINE L1 5599 5881 -1927 50 31 0 0 chr5 56158871 56158935 -146926597 + AT_rich Low_complexity Low_complexity 1 64 0 1441 201 25 32 chr5 56159469 56159783 -146925749 + AluJb SINE Alu 1 312 0 511 309 53 11 chr5 56159966 56160154 -146925378 + MIR SINE MIR 18 213 -49 3005 57 186 175 chr5 56160160 56160850 -146924682 + LTR12 LTR ERV1 1 697 -17 * 20563 97 11 12 chr5 56160844 56163777 -146921755 + HERV9 LTR ERV1 210 3139 -5260 5833 93 6 11 chr5 56163784 56164599 -146920933 + HERV9 LTR ERV1 4080 4890 -3509 395 58 0 0 chr5 56164700 56164752 -146920780 + HERV17 LTR ERV1 998 1049 -7577 * 1714 110 14 29 chr5 56164739 56165144 -146920388 + HERV17 LTR ERV1 1275 1720 -5176 * 4772 90 2 0 chr5 56165139 56165781 -146919751 + HERV17 LTR ERV1 7757 8399 0 1346 58 246 0 chr5 56165781 56165988 -146919544 + LTR12 LTR ERV1 1 258 -456 365 265 17 0 chr5 56165988 56166105 -146919427 + LTR30 LTR ERV1 524 642 -80 1835 74 6 2 chr5 56166106 56166356 -146919176 + LTR12 LTR ERV1 375 714 0 2238 124 27 16 chr5 56167293 56167664 -146917868 + THE1C LTR MaLR 1 375 0 271 277 80 0 chr5 56167812 56167924 -146917608 + MLT1J LTR MaLR 385 505 -6 369 314 13 19 chr5 56168122 56168281 -146917251 + L1MEd LINE L1 9 166 -5953 271 270 0 14 chr5 56169278 56169352 -146916180 - L2 LINE L2 -1052 2262 2190 26 50 0 0 chr5 56171398 56171438 -146914094 + AT_rich Low_complexity Low_complexity 1 40 0 362 260 130 32 chr5 56171602 56171756 -146913776 + MIR SINE MIR 67 235 -27 194 182 0 0 chr5 56171757 56171790 -146913742 - MIR SINE MIR -2 260 228 1202 120 11 11 chr5 56172091 56172275 -146913257 - Charlie3 DNA MER1_type -12 2698 2515 269 320 144 0 chr5 56172464 56172561 -146912971 - L2 LINE L2 0 3313 3203 201 322 62 62 chr5 56172596 56172773 -146912759 - L2 LINE L2 -252 3020 2844 1458 213 16 3 chr5 56172919 56173224 -146912308 + L1ME1 LINE L1 5526 5834 -332 239 222 95 0 chr5 56173265 56173328 -146912204 + L1MC/D LINE L1 5821 5889 -1896 3644 109 0 19 chr5 56173495 56174016 -146911516 + MER9 LTR ERVK 1 511 0 19562 92 9 9 chr5 56174016 56174777 -146910755 + HERVK9 LTR ERVK 1 760 -5156 191 228 0 88 chr5 56174777 56174834 -146910698 + MER5B DNA MER1_type 55 106 -72 19562 92 9 9 chr5 56174834 56176801 -146908731 + HERVK9 LTR ERVK 760 2786 -3130 14509 85 10 1 chr5 56176801 56178707 -146906825 + HERVK9 LTR ERVK 3711 5634 -282 3410 115 22 6 chr5 56178738 56179241 -146906291 + MER9 LTR ERVK 1 511 0 193 98 49 33 chr5 56179796 56179857 -146905675 + CT-rich Low_complexity Low_complexity 2 63 0 23 0 0 0 chr5 56181630 56181653 -146903879 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 56181807 56181834 -146903698 + AT_rich Low_complexity Low_complexity 1 27 0 23545 39 4 4 chr5 56182065 56185753 -146899779 + L1PA4 LINE L1 2463 6152 -3 23 54 0 0 chr5 56185857 56185894 -146899638 + AT_rich Low_complexity Low_complexity 1 37 0 345 115 0 0 chr5 56185942 56185994 -146899538 - MADE1 DNA Mariner -27 53 2 221 364 118 27 chr5 56186414 56186788 -146898744 + L2 LINE L2 1980 2387 -927 33 56 0 0 chr5 56187776 56187830 -146897702 + AT_rich Low_complexity Low_complexity 1 54 0 297 0 0 0 chr5 56188925 56188958 -146896574 + (TG)n Simple_repeat Simple_repeat 2 34 0 27 73 0 0 chr5 56189651 56189706 -146895826 + AT_rich Low_complexity Low_complexity 1 55 0 1807 227 103 57 chr5 56191589 56192918 -146892614 - L1MCa LINE L1 -3948 2616 1163 1939 213 36 7 chr5 56192965 56193382 -146892150 + L1MB8 LINE L1 5421 5849 -329 318 195 23 11 chr5 56193383 56193470 -146892062 - L1MCa LINE L1 -5395 1169 1082 1240 142 52 9 chr5 56193512 56193744 -146891788 + MER46B DNA MER2_type 111 227 -9 835 235 80 0 chr5 56193748 56193999 -146891533 - L1MCa LINE L1 -4962 1083 813 1433 166 162 0 chr5 56194109 56194417 -146891115 + Tigger1 DNA MER2_type 2055 2412 -6 21 0 0 0 chr5 56194547 56194568 -146890964 + AT_rich Low_complexity Low_complexity 1 21 0 231 268 42 28 chr5 56194940 56195011 -146890521 + LTR33 LTR ERVL 25 96 -425 502 328 134 0 chr5 56195037 56195351 -146890181 + LTR33A LTR ERVL 125 480 -43 469 302 86 25 chr5 56195380 56195625 -146889907 - MIR SINE MIR 0 262 3 37 52 0 0 chr5 56195857 56195915 -146889617 + AT_rich Low_complexity Low_complexity 1 58 0 418 310 102 58 chr5 56196274 56196796 -146888736 + MLT1L LTR MaLR 4 548 -67 417 236 159 25 chr5 56196944 56197101 -146888431 - MER45A DNA AcHobo 0 178 1 221 276 81 103 chr5 56197930 56198104 -146887428 + MER5B DNA MER1_type 3 172 -6 2206 103 3 3 chr5 56198270 56198561 -146886971 + AluSp SINE Alu 2 292 -21 222 128 0 0 chr5 56200776 56200815 -146884717 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 505 279 212 13 chr5 56201572 56201798 -146883734 - L2 LINE L2 -761 2553 2283 204 276 92 35 chr5 56201846 56201933 -146883599 - L2 LINE L2 -1028 2286 2195 2178 122 3 3 chr5 56202118 56202453 -146883079 - L1PB1 LINE L1 -1 6150 5816 479 289 19 38 chr5 56202480 56202639 -146882893 - L1MEd LINE L1 -5483 636 481 230 152 0 0 chr5 56203441 56203487 -146882045 - L1MB2 LINE L1 -16 6155 6110 924 212 0 0 chr5 56203488 56203653 -146881879 + AluJb SINE Alu 137 301 -11 2193 95 3 27 chr5 56203659 56203954 -146881578 + AluSx SINE Alu 4 291 -21 2676 221 70 9 chr5 56203967 56204515 -146881017 - L1MA7 LINE L1 -187 6104 5591 186 103 0 0 chr5 56204515 56204544 -146880988 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2676 221 70 9 chr5 56204544 56205198 -146880334 - L1MA7 LINE L1 -700 5591 4814 625 194 122 144 chr5 56205207 56205567 -146879965 + MLT1E1 LTR MaLR 120 584 -70 651 227 74 34 chr5 56207391 56207567 -146877965 - MER20 DNA MER1_type -13 206 24 234 0 0 0 chr5 56208279 56208305 -146877227 + (A)n Simple_repeat Simple_repeat 1 26 0 25 65 0 0 chr5 56209936 56209982 -146875550 + AT_rich Low_complexity Low_complexity 1 46 0 441 90 0 0 chr5 56211332 56211399 -146874133 + (TTTTG)n Simple_repeat Simple_repeat 4 70 0 1937 128 4 4 chr5 56211401 56211682 -146873850 - AluSx SINE Alu -31 281 1 1687 147 19 13 chr5 56211940 56212253 -146873279 - L1MA9 LINE L1 0 6312 5998 188 381 0 0 chr5 56213432 56213495 -146872037 + L2 LINE L2 3192 3254 -18 691 224 36 63 chr5 56214863 56215037 -146870495 + MIR SINE MIR 94 260 -2 673 282 68 26 chr5 56215894 56216128 -146869404 - MIR SINE MIR -6 256 13 28 61 0 0 chr5 56216351 56216400 -146869132 + AT_rich Low_complexity Low_complexity 1 49 0 631 143 8 63 chr5 56216507 56216633 -146868899 + L1PB3 LINE L1 6034 6152 -2 24 0 0 0 chr5 56216633 56216657 -146868875 + AT_rich Low_complexity Low_complexity 1 24 0 2109 124 0 9 chr5 56217877 56218192 -146867340 + AluSx SINE Alu 1 312 0 330 351 30 12 chr5 56218948 56219113 -146866419 + L2 LINE L2 2282 2449 -865 1285 200 85 7 chr5 56220455 56220725 -146864807 + MSTA LTR MaLR 1 291 -137 1380 175 131 0 chr5 56221634 56221931 -146863601 + MER1B DNA MER1_type 2 337 0 1926 158 57 8 chr5 56223397 56223783 -146861749 + L1MA6 LINE L1 5883 6287 -13 768 171 40 0 chr5 56223810 56223985 -146861547 + L1MA8 LINE L1 6106 6287 -4 2199 104 3 0 chr5 56223987 56224285 -146861247 + AluSp SINE Alu 1 299 -14 24 32 0 0 chr5 56224366 56224397 -146861135 + AT_rich Low_complexity Low_complexity 1 31 0 29 47 0 0 chr5 56225957 56226000 -146859532 + AT_rich Low_complexity Low_complexity 1 43 0 4240 189 46 55 chr5 56227054 56227604 -146857928 - Charlie1a DNA MER1_type -1306 1455 901 3690 145 17 0 chr5 56227604 56228197 -146857335 + LTR26 LTR ERV1 1 603 0 4240 189 46 55 chr5 56228197 56228902 -146856630 - Charlie1a DNA MER1_type -1860 901 164 414 244 118 0 chr5 56228892 56229019 -146856513 - Charlie1a DNA MER1_type -1312 143 2 * 634 329 70 0 chr5 56229498 56229741 -146855791 - MIR SINE MIR 0 262 3 436 133 133 24 chr5 56230248 56230331 -146855201 + MLT1B LTR MaLR 4 95 -295 200 392 39 0 chr5 56230758 56230860 -146854672 + MIR SINE MIR 87 192 -70 21 0 0 0 chr5 56231476 56231497 -146854035 + AT_rich Low_complexity Low_complexity 1 21 0 207 263 202 20 chr5 56231958 56232057 -146853475 + MIR SINE MIR 16 132 -76 1525 268 25 44 chr5 56232622 56232696 -146852836 + LTR40a LTR ERVL 1 75 -444 1786 128 37 4 chr5 56232696 56233027 -146852505 + AluSg SINE Alu 1 340 0 1525 268 25 44 chr5 56233027 56233469 -146852063 + LTR40a LTR ERVL 75 508 -11 236 242 61 0 chr5 56233914 56233980 -146851552 + MIR SINE MIR 104 173 -89 489 309 140 72 chr5 56235578 56236261 -146849271 - L2 LINE L2 -2 3270 2565 198 0 0 0 chr5 56237196 56237218 -146848314 + (T)n Simple_repeat Simple_repeat 1 22 0 30 0 0 0 chr5 56237417 56237447 -146848085 + AT_rich Low_complexity Low_complexity 1 30 0 1057 188 0 18 chr5 56238959 56239182 -146846350 + AluJo SINE Alu 86 304 -8 281 140 18 0 chr5 56239379 56239436 -146846096 + (CA)n Simple_repeat Simple_repeat 1 58 0 2251 168 48 15 chr5 56239864 56240820 -146844712 - L1MA9 LINE L1 0 6312 5259 346 317 69 21 chr5 56240874 56241019 -146844513 + MIR SINE MIR 51 202 -60 22 0 0 0 chr5 56241358 56241380 -146844152 + AT_rich Low_complexity Low_complexity 1 22 0 1045 210 33 40 chr5 56241491 56241791 -146843741 + MER33 DNA MER1_type 5 302 -22 1234 251 73 98 chr5 56242546 56243704 -146841828 - L1MC5 LINE L1 -289 7672 6541 572 268 142 37 chr5 56244007 56244627 -146840905 - L1MC4a LINE L1 -1456 6352 5668 2109 136 0 0 chr5 56245701 56246011 -146839521 - AluSx SINE Alu -2 310 1 24 32 0 0 chr5 56246975 56247006 -146838526 + AT_rich Low_complexity Low_complexity 1 31 0 4318 153 32 19 chr5 56247581 56248390 -146837142 - L1MA8 LINE L1 -4 6287 5468 25 0 0 0 chr5 56248511 56248536 -146836996 + AT_rich Low_complexity Low_complexity 1 25 0 874 344 111 7 chr5 56248722 56249129 -146836403 - MLT1J LTR MaLR -62 449 1 207 313 16 16 chr5 56249199 56249263 -146836269 + MIR3 SINE MIR 10 73 -135 21 71 0 0 chr5 56250071 56250113 -146835419 + AT_rich Low_complexity Low_complexity 1 42 0 195 344 76 38 chr5 56250626 56250783 -146834749 + L2 LINE L2 2659 2821 -493 21 0 0 0 chr5 56250824 56250845 -146834687 + AT_rich Low_complexity Low_complexity 1 21 0 288 302 69 35 chr5 56250846 56250962 -146834570 - L2 LINE L2 -1 3312 3193 326 287 12 85 chr5 56251115 56251279 -146834253 + L2 LINE L2 2909 3060 -212 1069 336 41 28 chr5 56251571 56252139 -146833393 + L2 LINE L2 2453 3026 -287 248 200 33 17 chr5 56252431 56252514 -146833018 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 1576 58 151 27 chr5 56252809 56253091 -146832441 - AluY SINE Alu 0 301 1 22 35 0 0 chr5 56253222 56253251 -146832281 + AT_rich Low_complexity Low_complexity 1 29 0 1277 175 73 29 chr5 56253534 56253780 -146831752 - AluJo SINE Alu -55 257 1 277 243 6 123 chr5 56255938 56256167 -146829365 + Charlie8 DNA MER1_type 129 1418 -999 228 333 30 10 chr5 56257071 56257170 -146828362 + L2 LINE L2 3201 3301 -12 195 69 0 0 chr5 56258187 56258216 -146827316 + (A)n Simple_repeat Simple_repeat 1 29 0 2327 53 23 0 chr5 56259049 56259349 -146826183 + L1PA7 LINE L1 5845 6151 -3 1893 167 36 25 chr5 56259632 56259992 -146825540 - THE1B LTR MaLR 0 364 1 294 125 0 0 chr5 56260233 56260281 -146825251 + (TG)n Simple_repeat Simple_repeat 2 49 0 529 243 14 74 chr5 56260376 56260581 -146824951 + MIR SINE MIR 3 192 -61 2532 138 19 5 chr5 56262431 56262857 -146822675 - L1MA5A LINE L1 -8 6289 5858 25 0 0 0 chr5 56263869 56263894 -146821638 + AT_rich Low_complexity Low_complexity 1 25 0 341 336 45 85 chr5 56264084 56264266 -146821266 - L2 LINE L2 -420 2894 2706 1723 130 75 39 chr5 56264266 56264628 -146820904 + THE1C LTR MaLR 1 375 0 341 336 45 85 chr5 56264628 56265007 -146820525 - L2 LINE L2 -608 2706 2356 555 298 63 30 chr5 56265712 56266014 -146819518 + MLT1L LTR MaLR 261 572 -43 824 181 13 13 chr5 56266395 56266550 -146818982 - MLT1D LTR MaLR -350 155 1 188 302 14 86 chr5 56266904 56267043 -146818489 - MER5A DNA MER1_type 0 189 61 2218 245 40 37 chr5 56267726 56268400 -146817132 - LTR8 LTR ERV1 0 691 16 5524 147 9 9 chr5 56268577 56269480 -146816052 + MER4D LTR ERV1 1 903 0 996 291 98 14 chr5 56270020 56270378 -146815154 + LTR16C LTR ERVL 102 489 -2 267 321 97 72 chr5 56270535 56270772 -146814760 + L3 LINE CR1 1334 1576 -1 1249 300 42 5 chr5 56271852 56272235 -146813297 + MLT1G LTR MaLR 1 397 -193 850 166 31 26 chr5 56272237 56272430 -146813102 - MER4C LTR ERV1 -3 462 269 22 35 0 0 chr5 56372986 56373015 -146712517 + AT_rich Low_complexity Low_complexity 1 29 0 566 315 143 0 chr5 56373442 56373645 -146711887 + MIR SINE MIR 24 255 -7 3141 226 61 15 chr5 56373778 56374710 -146710822 + L1MB8 LINE L1 5202 6176 -2 1622 232 48 6 chr5 56374823 56375176 -146710356 + MLT1H1 LTR MaLR 188 555 0 566 230 29 75 chr5 56375176 56375261 -146710271 - LTR16C LTR ERVL -67 424 349 1941 140 17 7 chr5 56375261 56375554 -146709978 + AluSx SINE Alu 1 296 -16 566 230 29 75 chr5 56375554 56375640 -146709892 - LTR16C LTR ERVL -142 349 261 2486 160 14 12 chr5 56375918 56376342 -146709190 + MSTB LTR MaLR 1 425 -1 2155 109 3 10 chr5 56377040 56377334 -146708198 - AluSp SINE Alu -19 294 3 296 179 0 0 chr5 56377424 56377491 -146708041 + L1MA7 LINE L1 6224 6290 -1 34 65 0 0 chr5 56377780 56377842 -146707690 + AT_rich Low_complexity Low_complexity 1 62 0 670 281 126 19 chr5 56378042 56378305 -146707227 - MLT1H1 LTR MaLR -235 320 30 23 0 0 0 chr5 56381349 56381372 -146704160 + AT_rich Low_complexity Low_complexity 1 23 0 333 267 107 33 chr5 56381466 56381616 -146703916 + MIR3 SINE MIR 48 208 0 22 0 0 0 chr5 56381616 56381638 -146703894 + AT_rich Low_complexity Low_complexity 1 22 0 343 333 9 0 chr5 56381873 56381978 -146703554 + GA-rich Low_complexity Low_complexity 4 109 0 1725 210 35 65 chr5 56382792 56383420 -146702112 - Charlie1a DNA MER1_type -5 1450 842 2225 191 21 13 chr5 56383420 56383887 -146701645 - L1MC1 LINE L1 0 6333 5863 1035 282 128 0 chr5 56383887 56384231 -146701301 - Charlie1a DNA MER1_type -1067 388 1 34 55 0 0 chr5 56385534 56385589 -146699943 + AT_rich Low_complexity Low_complexity 1 55 0 252 374 22 0 chr5 56387556 56387647 -146697885 + MIR SINE MIR 40 132 -76 197 354 0 0 chr5 56389449 56389531 -146696001 + L2 LINE L2 2678 2759 -555 2353 125 23 0 chr5 56389553 56389898 -146695634 + THE1B LTR MaLR 10 362 -2 218 326 50 107 chr5 56389921 56390285 -146695247 + L2 LINE L2 2791 3133 -180 24506 31 2 0 chr5 56390331 56393305 -146692227 - L1PA3 LINE L1 -1756 4390 1413 8067 31 0 0 chr5 56393305 56395045 -146690487 + L1PA3 LINE L1 4416 6155 0 189 291 0 0 chr5 56395120 56395175 -146690357 + MIR SINE MIR 178 232 -30 279 360 9 26 chr5 56395244 56395358 -146690174 + L2 LINE L2 3160 3271 -1 22 35 0 0 chr5 56396683 56396712 -146688820 + AT_rich Low_complexity Low_complexity 1 29 0 2566 104 22 7 chr5 56397385 56397789 -146687743 + L1PA8 LINE L1 5760 6169 -3 297 0 0 0 chr5 56398871 56398904 -146686628 + (TG)n Simple_repeat Simple_repeat 2 34 0 314 363 33 28 chr5 56399329 56399511 -146686021 + L2 LINE L2 3126 3308 -5 35 0 0 0 chr5 56399619 56399654 -146685878 + AT_rich Low_complexity Low_complexity 1 35 0 1798 162 175 0 chr5 56399657 56399749 -146685783 - L1MA6 LINE L1 -1 6299 6224 1668 151 167 16 chr5 56399749 56400121 -146685411 + MSTA LTR MaLR 1 428 0 1798 162 175 0 chr5 56400121 56400410 -146685122 - L1MA6 LINE L1 -76 6224 5851 1561 221 25 56 chr5 56400648 56401128 -146684404 - MLT1C LTR MaLR -2 465 1 2286 116 0 0 chr5 56401729 56402070 -146683462 - AluSg SINE Alu 0 341 1 652 233 46 50 chr5 56402701 56402920 -146682612 + Charlie8 DNA MER1_type 107 286 -2131 22 0 0 0 chr5 56405023 56405045 -146680487 + AT_rich Low_complexity Low_complexity 1 22 0 11931 196 19 103 chr5 56405138 56406877 -146678655 - L1PA15 LINE L1 0 6816 4934 219 69 0 0 chr5 56406877 56406906 -146678626 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 11931 196 19 103 chr5 56406906 56408134 -146677398 - L1PA15 LINE L1 -1882 4934 3605 2270 111 7 0 chr5 56408134 56408432 -146677100 - AluSp SINE Alu -13 300 1 11931 196 19 103 chr5 56408432 56409243 -146676289 - L1PA15 LINE L1 -3211 3605 2728 3174 116 41 4 chr5 56409243 56409726 -146675806 - MER75 DNA T2_type -13 501 1 11931 196 19 103 chr5 56409726 56410792 -146674740 - L1PA15 LINE L1 -4088 2728 2041 1822 173 0 26 chr5 56410792 56411098 -146674434 - AluJb SINE Alu -13 299 2 11931 196 19 103 chr5 56411098 56411837 -146673695 - L1PA15 LINE L1 -4775 2041 1242 3010 293 42 25 chr5 56411849 56412751 -146672781 - L1PA15 LINE L1 -5869 918 2 2417 56 0 1 chr5 56412759 56413159 -146672373 - L1P2 LINE L1 -679 5475 5077 373 0 0 0 chr5 56413158 56413199 -146672333 + L1P2 LINE L1 5530 5570 -584 * 999 220 56 70 chr5 56413199 56413540 -146671992 - MLT1E2 LTR MaLR -203 423 88 21 0 0 0 chr5 56413661 56413682 -146671850 + AT_rich Low_complexity Low_complexity 1 21 0 430 194 9 9 chr5 56413709 56413817 -146671715 + L1MB7 LINE L1 6071 6178 -6 621 325 77 13 chr5 56413979 56414213 -146671319 - MIR SINE MIR 0 262 14 26 64 0 0 chr5 56414347 56414394 -146671138 + AT_rich Low_complexity Low_complexity 1 47 0 * 784 58 10 0 chr5 56414386 56414490 -146671042 - L1PA4 LINE L1 -2 6153 6049 5095 35 11 0 chr5 56414395 56415002 -146670530 - L1PA4 LINE L1 -12 6143 5530 2491 44 0 1 chr5 56415002 56415474 -146670058 + L1PA4 LINE L1 5078 5548 -606 342 331 0 15 chr5 56415474 56415499 -146670033 + MIR SINE MIR 121 145 -117 2136 169 58 60 chr5 56415499 56415967 -146669565 - MLT1C LTR MaLR 0 467 1 342 331 0 15 chr5 56415967 56416074 -146669458 + MIR SINE MIR 145 251 -11 334 335 60 27 chr5 56416464 56416649 -146668883 + MIR3 SINE MIR 3 193 -15 656 154 0 9 chr5 56416672 56416782 -146668750 + Tigger4(Zombi) DNA MER2_type 2622 2730 -1 3031 73 42 0 chr5 56416984 56417393 -146668139 - L1PA7 LINE L1 0 6154 5729 3554 65 1 12 chr5 56417393 56417921 -146667611 + L1PA7 LINE L1 5193 5715 -439 402 254 166 28 chr5 56419662 56419843 -146665689 - MIR SINE MIR -55 207 2 239 333 44 11 chr5 56419855 56419945 -146665587 + L2 LINE L2 3139 3231 -41 271 252 16 55 chr5 56420856 56420983 -146664549 - L1MC/D LINE L1 -1985 5823 5702 1310 223 31 62 chr5 56421064 56421449 -146664083 + MLT1A2 LTR MaLR 2 374 0 353 257 119 36 chr5 56421521 56421824 -146663708 - L1ME4a LINE L1 -142 5979 5652 1881 166 6 10 chr5 56422169 56422482 -146663050 + AluSx SINE Alu 1 312 0 207 274 36 48 chr5 56422665 56422749 -146662783 + MIR SINE MIR 99 181 -81 15191 49 26 1 chr5 56422838 56424770 -146660762 + L1P LINE L1 487 2466 -3680 1985 143 55 25 chr5 56424903 56425267 -146660265 + THE1C LTR MaLR 1 375 0 9623 117 30 36 chr5 56425270 56426857 -146658675 + THE1C-int LTR MaLR 4 1580 0 1625 155 73 39 chr5 56426866 56427221 -146658311 + THE1C LTR MaLR 9 375 0 246 32 0 0 chr5 56427495 56427526 -146658006 + (TG)n Simple_repeat Simple_repeat 2 32 0 347 293 131 42 chr5 56427638 56428095 -146657437 - L1M4 LINE L1 -2962 3184 2687 33 0 0 0 chr5 56428318 56428351 -146657181 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr5 56428432 56428482 -146657050 + AT_rich Low_complexity Low_complexity 1 50 0 203 332 153 33 chr5 56428482 56428723 -146656809 + L2 LINE L2 2374 2643 -671 26 0 0 0 chr5 56428749 56428775 -146656757 + AT_rich Low_complexity Low_complexity 1 26 0 1369 256 16 11 chr5 56428783 56429146 -146656386 - MLT1A1 LTR MaLR 0 365 1 193 209 47 0 chr5 56429665 56429708 -146655824 - MIR SINE MIR 0 262 218 1497 278 28 35 chr5 56429709 56430216 -146655316 - LTR40a LTR ERVL 0 519 17 440 279 29 0 chr5 56430216 56430352 -146655180 - MIR SINE MIR -27 235 96 185 65 32 0 chr5 56431085 56431116 -146654416 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 456 303 79 46 chr5 56431688 56431929 -146653603 - MLT1K LTR MaLR -13 575 327 215 333 0 0 chr5 56433209 56433281 -146652251 - L2 LINE L2 0 3272 3201 562 259 8 0 chr5 56433616 56433747 -146651785 - MER94 DNA DNA -2 132 1 304 280 84 0 chr5 56435863 56435970 -146649562 + MIR SINE MIR 33 148 -60 214 317 10 50 chr5 56436211 56436312 -146649220 - MIR3 SINE MIR -14 194 98 241 216 23 23 chr5 56436762 56436850 -146648682 + GA-rich Low_complexity Low_complexity 2 89 0 1042 82 11 33 chr5 56436850 56436936 -146648596 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 1042 82 11 33 chr5 56436936 56437120 -146648412 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 25 31 0 0 chr5 56438118 56438150 -146647382 + AT_rich Low_complexity Low_complexity 1 32 0 204 325 13 0 chr5 56438639 56438716 -146646816 - MIR SINE MIR -12 250 173 28 29 0 0 chr5 56438750 56438785 -146646747 + AT_rich Low_complexity Low_complexity 1 35 0 204 67 0 0 chr5 56439350 56439380 -146646152 + (GA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 56440071 56440093 -146645439 + AT_rich Low_complexity Low_complexity 1 22 0 1875 126 0 84 chr5 56440863 56441196 -146644336 + AluSx SINE Alu 1 305 -7 31 58 0 0 chr5 56443727 56443779 -146641753 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr5 56443801 56443834 -146641698 + AT_rich Low_complexity Low_complexity 1 33 0 184 265 98 59 chr5 56445092 56445194 -146640338 + MIR SINE MIR 40 145 -63 1909 117 0 0 chr5 56446117 56446374 -146639158 + AluSq SINE Alu 40 296 -17 24 85 0 0 chr5 56446483 56446542 -146638990 + AT_rich Low_complexity Low_complexity 1 59 0 198 71 0 0 chr5 56447771 56447799 -146637733 + (TG)n Simple_repeat Simple_repeat 1 28 0 326 303 61 0 chr5 56448058 56448190 -146637342 + L2 LINE L2 2215 2354 -960 216 344 130 17 chr5 56448302 56448532 -146637000 + L2 LINE L2 2554 2809 -505 246 20 0 80 chr5 56449200 56449250 -146636282 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 191 377 46 6 chr5 56449334 56449509 -146636023 - L2 LINE L2 -523 2791 2610 34 55 0 0 chr5 56449509 56449564 -146635968 + AT_rich Low_complexity Low_complexity 1 55 0 667 172 190 11 chr5 56449625 56449799 -146635733 + L1PBa LINE L1 1 205 -6658 303 279 64 43 chr5 56450145 56450285 -146635247 + MIR3 SINE MIR 5 147 -61 185 0 40 0 chr5 56450326 56450351 -146635181 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 201 309 82 9 chr5 56450828 56450938 -146634594 - L2 LINE L2 -848 2466 2349 654 265 50 5 chr5 56451203 56451403 -146634129 - MER3 DNA MER1_type 0 209 1 332 219 0 0 chr5 56452148 56452212 -146633320 + MER117 DNA MER1_type 56 119 -78 192 320 100 10 chr5 56452826 56452926 -146632606 - L2 LINE L2 0 3272 3164 202 268 14 56 chr5 56454537 56454608 -146630924 + L2 LINE L2 3234 3301 -12 1988 135 3 0 chr5 56455628 56455917 -146629615 - AluSc SINE Alu -19 290 1 311 257 0 27 chr5 56456893 56456967 -146628565 + L2 LINE L2 3242 3313 0 662 179 211 9 chr5 56457182 56457405 -146628127 - L1MD2 LINE L1 -2 6357 6090 25643 137 12 18 chr5 56457879 56461675 -146623857 - L1PA8A LINE L1 -28 6418 2613 186 43 0 0 chr5 56461675 56461698 -146623834 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 25643 137 12 18 chr5 56461698 56464241 -146621291 - L1PA8A LINE L1 -3833 2613 57 192 135 0 0 chr5 56464424 56464461 -146621071 + (CA)n Simple_repeat Simple_repeat 2 38 0 2405 81 0 0 chr5 56464900 56465197 -146620335 + AluY SINE Alu 1 297 -14 21 36 0 0 chr5 56465472 56465500 -146620032 + AT_rich Low_complexity Low_complexity 1 28 0 315 71 0 0 chr5 56465623 56465665 -146619867 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr5 56465761 56465782 -146619750 + AT_rich Low_complexity Low_complexity 1 21 0 376 292 41 97 chr5 56466271 56466499 -146619033 + L1MEd LINE L1 730 926 -5193 2374 222 54 29 chr5 56466499 56467089 -146618443 - MER77 LTR ERV1 0 605 1 376 292 41 97 chr5 56467089 56467274 -146618258 + L1MEd LINE L1 926 1120 -4999 205 333 0 0 chr5 56467606 56467675 -146617857 + MIR SINE MIR 92 160 -102 369 323 39 20 chr5 56468486 56468842 -146616690 + L1MEd LINE L1 2249 2611 -3518 391 174 256 0 chr5 56468870 56468956 -146616576 + AluJb SINE Alu 1 108 -194 483 304 141 14 chr5 56468975 56469112 -146616420 - MER20B DNA MER1_type -368 415 297 772 194 67 22 chr5 56469112 56469292 -146616240 - MER5A DNA MER1_type 0 189 2 483 304 141 14 chr5 56469292 56469437 -146616095 - MER20B DNA MER1_type -486 297 97 * 530 260 206 10 chr5 56469434 56469638 -146615894 - MLT1H1 LTR MaLR -311 244 1 266 283 9 66 chr5 56469844 56469950 -146615582 - MLT1A2-int LTR MaLR -238 1133 1034 814 196 53 72 chr5 56469970 56470235 -146615297 + MLT1A1 LTR MaLR 1 260 -105 228 250 4 42 chr5 56470709 56470801 -146614731 - MLT1A2-int LTR MaLR -1280 91 2 326 345 154 26 chr5 56470852 56471119 -146614413 - MLT1H1 LTR MaLR -207 348 48 1592 157 32 21 chr5 56471135 56471415 -146614117 - AluJb SINE Alu -29 283 1 238 225 0 0 chr5 56471415 56471455 -146614077 - MLT1H1 LTR MaLR -495 60 21 441 303 162 25 chr5 56474440 56474638 -146610894 - MIR SINE MIR -36 226 2 666 201 41 42 chr5 56475129 56475315 -146610217 + MER5B DNA MER1_type 1 189 0 260 291 188 0 chr5 56475639 56475756 -146609776 + MIR SINE MIR 84 222 -40 214 429 7 21 chr5 56478041 56478181 -146607351 - MIR3 SINE MIR -48 160 23 8981 37 13 1 chr5 56478371 56480115 -146605417 + L1PA16 LINE L1 4328 6153 -2 2211 117 0 3 chr5 56480546 56480853 -146604679 + AluSg SINE Alu 1 306 -4 1353 256 38 11 chr5 56480880 56481227 -146604305 - MLT1A2 LTR MaLR 0 374 19 23 33 0 0 chr5 56481539 56481569 -146603963 + AT_rich Low_complexity Low_complexity 1 30 0 2028 181 37 76 chr5 56483173 56483713 -146601819 + LTR53 LTR ERVL 1 519 0 25 0 0 0 chr5 56483828 56483853 -146601679 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 56483942 56483966 -146601566 + AT_rich Low_complexity Low_complexity 1 24 0 2797 138 8 36 chr5 56487862 56488332 -146597200 - LTR32 LTR ERVL 0 471 15 571 230 17 73 chr5 56488474 56488652 -146596880 + MER20 DNA MER1_type 52 219 0 532 301 0 0 chr5 56488820 56488953 -146596579 - L2 LINE L2 0 3272 3140 291 288 63 9 chr5 56489166 56489277 -146596255 - L2 LINE L2 -208 3064 2948 275 319 28 62 chr5 56490483 56490627 -146594905 - L2 LINE L2 0 3272 3134 478 309 62 31 chr5 56491270 56491529 -146594003 + L2 LINE L2 3041 3307 -6 314 309 146 34 chr5 56491647 56491825 -146593707 + MIR SINE MIR 4 201 -61 728 313 122 47 chr5 56492198 56492814 -146592718 - L3 LINE CR1 -45 1532 871 240 263 13 40 chr5 56493205 56493281 -146592251 + Charlie4 DNA MER1_type 1888 1961 0 263 320 40 20 chr5 56493309 56493409 -146592123 - MIR3 SINE MIR -97 111 10 210 200 0 20 chr5 56493447 56493497 -146592035 + (TA)n Simple_repeat Simple_repeat 2 50 0 7037 51 3 10 chr5 56494107 56495064 -146590468 + L1PA6 LINE L1 5204 6154 0 328 399 6 24 chr5 56495096 56495264 -146590268 - MIR3 SINE MIR 0 208 44 236 305 8 55 chr5 56495512 56495640 -146589892 - MIR3 SINE MIR -2 206 85 7360 214 43 31 chr5 56495941 56497645 -146587887 - L1MC1 LINE L1 -9 6324 4570 2241 113 3 0 chr5 56497645 56497946 -146587586 + AluSx SINE Alu 1 302 -10 7360 214 43 31 chr5 56497946 56499480 -146586052 - L1MC1 LINE L1 -1763 4570 3056 699 137 0 0 chr5 56499480 56499604 -146585928 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 382 206 0 0 chr5 56499606 56499674 -146585858 - AluJ/FRAM SINE Alu -5 297 230 37406 38 2 5 chr5 56499675 56505105 -146580427 + L1PA4 LINE L1 741 6155 0 618 181 8 16 chr5 56505689 56505816 -146579716 + MER105 DNA DNA 37 162 -42 187 286 143 55 chr5 56505908 56505981 -146579551 + L2 LINE L2 3174 3258 -14 2113 97 45 3 chr5 56505981 56506271 -146579261 + AluSx SINE Alu 1 302 -10 187 286 143 55 chr5 56506271 56506288 -146579244 + L2 LINE L2 3258 3272 0 185 368 50 22 chr5 56507664 56507846 -146577686 + MIR3 SINE MIR 5 191 -17 258 260 0 0 chr5 56509368 56509418 -146576114 - MIR SINE MIR -192 70 21 309 329 72 18 chr5 56509684 56509851 -146575681 - MIR SINE MIR -70 192 17 241 368 57 0 chr5 56509956 56510062 -146575470 + MIR SINE MIR 31 142 -66 395 248 43 43 chr5 56510207 56510348 -146575184 + L2 LINE L2 3173 3313 0 180 111 0 0 chr5 56510766 56510793 -146574739 + (T)n Simple_repeat Simple_repeat 1 27 0 1600 62 0 5 chr5 56510809 56511002 -146574530 - AluY SINE Alu -83 228 37 1937 156 26 34 chr5 56511120 56511498 -146574034 + THE1C LTR MaLR 1 375 0 10458 112 28 15 chr5 56511498 56513058 -146572474 + THE1C-int LTR MaLR 1 1580 0 1160 153 29 37 chr5 56513182 56513424 -146572108 + THE1C LTR MaLR 136 375 0 663 198 25 0 chr5 56513654 56513775 -146571757 - FLAM_A SINE Alu -8 125 2 33 0 0 0 chr5 56513829 56513862 -146571670 + AT_rich Low_complexity Low_complexity 1 33 0 357 24 0 0 chr5 56514529 56514571 -146570961 + (TG)n Simple_repeat Simple_repeat 1 42 0 2238 131 0 0 chr5 56515164 56515476 -146570056 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 56515682 56515706 -146569826 + AT_rich Low_complexity Low_complexity 1 24 0 355 319 33 33 chr5 56516563 56516745 -146568787 - MER5A DNA MER1_type -7 182 1 21 0 0 0 chr5 56516777 56516798 -146568734 + AT_rich Low_complexity Low_complexity 1 21 0 7652 24 0 0 chr5 56516801 56517778 -146567754 - L1PA3 LINE L1 -3 6152 5178 738 21 11 0 chr5 56517778 56517871 -146567661 + L1PA3 LINE L1 5083 5176 -970 25 31 0 0 chr5 56518750 56518782 -146566750 + AT_rich Low_complexity Low_complexity 1 32 0 193 279 162 0 chr5 56520527 56520595 -146564937 - L2 LINE L2 -1061 2253 2175 326 42 21 0 chr5 56521043 56521091 -146564441 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 333 29 0 chr5 56521195 56521297 -146564235 - MIR3 SINE MIR -22 186 82 433 297 66 73 chr5 56521493 56521752 -146563780 - MIR SINE MIR 0 262 6 263 307 84 109 chr5 56522518 56523006 -146562526 + L2 LINE L2 2705 3179 -93 371 305 24 66 chr5 56524254 56524467 -146561065 + HAL1 LINE L1 155 358 -2149 605 246 99 53 chr5 56524493 56524928 -146560604 + HAL1 LINE L1 2036 2490 -17 212 311 28 47 chr5 56525198 56525304 -146560228 + L2 LINE L2 3155 3258 -14 427 149 115 0 chr5 56525823 56525910 -146559622 - MLT1C LTR MaLR 0 467 371 1028 127 16 9 chr5 56525910 56526191 -146559341 - THE1B LTR MaLR 0 364 1 2150 147 11 17 chr5 56526191 56526434 -146559098 - MLT1C LTR MaLR -92 375 133 3212 83 9 9 chr5 56526434 56526878 -146558654 - MLT2A1 LTR ERVL 0 444 1 2150 147 11 17 chr5 56526878 56526995 -146558537 - MLT1C LTR MaLR -334 133 17 261 276 138 24 chr5 56527872 56527995 -146557537 + MARNA DNA Mariner 57 193 -393 4358 199 20 9 chr5 56528956 56530644 -146554888 + L1MB7 LINE L1 4458 6165 -19 306 250 83 0 chr5 56531320 56531416 -146554116 - LTR16A LTR ERVL -12 438 335 286 140 40 0 chr5 56532277 56532327 -146553205 + MADE1 DNA Mariner 1 52 -28 264 77 0 0 chr5 56532543 56532582 -146552950 + (TG)n Simple_repeat Simple_repeat 2 40 0 295 297 81 18 chr5 56532667 56532778 -146552754 - MIR SINE MIR -115 147 30 1309 163 76 116 chr5 56532836 56533216 -146552316 - MLT1A1 LTR MaLR 0 365 1 184 261 277 17 chr5 56534105 56534224 -146551308 - L2 LINE L2 -6 3307 3158 302 339 41 8 chr5 56534424 56534545 -146550987 + L2 LINE L2 3180 3304 -9 252 273 102 31 chr5 56535056 56535184 -146550348 - L2 LINE L2 -1405 1909 1773 251 54 27 0 chr5 56535281 56535318 -146550214 + (CA)n Simple_repeat Simple_repeat 2 39 0 378 42 0 0 chr5 56535850 56535898 -146549634 + (TG)n Simple_repeat Simple_repeat 2 49 0 668 296 100 54 chr5 56536043 56536155 -146549377 + L1MEd LINE L1 778 883 -1607 197 65 32 0 chr5 56536155 56536186 -146549346 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 668 296 100 54 chr5 56536186 56536782 -146548750 + L1MEd LINE L1 883 1639 -851 347 209 9 0 chr5 56536782 56536892 -146548640 + (CA)n Simple_repeat Simple_repeat 2 112 0 2050 125 7 0 chr5 56537027 56537330 -146548202 + AluSp SINE Alu 1 305 -8 281 230 0 68 chr5 56538338 56538412 -146547120 - MER115 DNA AcHobo -624 69 1 2224 89 3 0 chr5 56539630 56539912 -146545620 + AluSp SINE Alu 11 293 -20 221 83 28 0 chr5 56540877 56540913 -146544619 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1002 194 15 10 chr5 56541067 56541268 -146544264 + MER3 DNA MER1_type 3 204 -5 673 289 47 9 chr5 56541871 56542082 -146543450 + L2 LINE L2 2449 2667 -647 2591 107 6 3 chr5 56542170 56542533 -146542999 + THE1B LTR MaLR 1 364 0 704 197 0 0 chr5 56542710 56542832 -146542700 + AluJo SINE Alu 1 122 -190 944 277 122 26 chr5 56542855 56543105 -146542427 + L2 LINE L2 2695 2920 -393 1475 223 18 47 chr5 56543105 56543487 -146542045 + MLT1A2 LTR MaLR 4 374 0 944 277 122 26 chr5 56543487 56543788 -146541744 + L2 LINE L2 2920 3295 -18 1676 65 0 0 chr5 56544014 56544228 -146541304 + L1PA5 LINE L1 5934 6147 -7 2142 127 39 30 chr5 56544555 56544916 -146540616 + THE1B LTR MaLR 1 364 0 255 286 65 0 chr5 56545209 56545286 -146540246 - MIR3 SINE MIR -48 160 79 214 174 0 0 chr5 56545536 56545582 -146539950 + (TA)n Simple_repeat Simple_repeat 1 46 0 242 222 111 0 chr5 56545589 56545670 -146539862 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 56545670 56545694 -146539838 + (TA)n Simple_repeat Simple_repeat 2 25 0 1487 260 91 2 chr5 56545709 56546140 -146539392 - MLT2B1 LTR ERVL -51 469 1 370 296 76 48 chr5 56546404 56546761 -146538771 + Charlie8 DNA MER1_type 151 278 -2139 28 48 0 0 chr5 56547190 56547232 -146538300 + AT_rich Low_complexity Low_complexity 1 42 0 889 218 6 0 chr5 56547313 56547487 -146538045 + AluJo SINE Alu 125 299 -13 27 62 0 0 chr5 56547565 56547613 -146537919 + AT_rich Low_complexity Low_complexity 1 48 0 1988 204 63 73 chr5 56547698 56548256 -146537276 - MLT2B3 LTR ERVL -2 552 1 1030 209 125 52 chr5 56548503 56548872 -146536660 - MSTD LTR MaLR 0 396 1 26 0 0 0 chr5 56548925 56548951 -146536581 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr5 56550078 56550103 -146535429 + AT_rich Low_complexity Low_complexity 1 25 0 2036 119 34 0 chr5 56550106 56550401 -146535131 - AluSx SINE Alu -7 305 1 2330 57 0 0 chr5 56550810 56551141 -146534391 + AluY SINE Alu 1 331 0 192 380 0 13 chr5 56551671 56551750 -146533782 + L2 LINE L2 3000 3077 -195 344 288 87 85 chr5 56551785 56552061 -146533471 + L1ME4a LINE L1 5683 5962 -159 906 189 0 18 chr5 56552061 56552225 -146533307 - FRAM SINE Alu -5 161 1 344 288 87 85 chr5 56552225 56552337 -146533195 + L1ME4a LINE L1 5962 6072 -49 195 42 0 0 chr5 56553058 56553082 -146532450 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 412 298 180 41 chr5 56553692 56553987 -146531545 + L2 LINE L2 2978 3313 0 190 321 0 0 chr5 56554971 56555024 -146530508 + L2 LINE L2 3261 3313 0 1520 138 0 0 chr5 56555895 56556120 -146529412 + AluSg/x SINE Alu 83 307 -3 640 260 127 83 chr5 56557202 56557636 -146527896 + LTR33 LTR ERVL 4 456 -65 195 186 0 0 chr5 56557708 56557751 -146527781 + (CATA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr5 56559203 56559223 -146526309 + (TG)n Simple_repeat Simple_repeat 2 21 0 2870 250 54 85 chr5 56559691 56560890 -146524642 - L1M4 LINE L1 -5365 1177 16 23 0 0 0 chr5 56561152 56561175 -146524357 + AT_rich Low_complexity Low_complexity 1 23 0 1534 203 6 22 chr5 56561186 56561501 -146524031 - AluJo SINE Alu 0 312 3 2346 85 0 0 chr5 56561705 56561998 -146523534 - AluY SINE Alu -18 293 1 33 25 0 0 chr5 56563578 56563618 -146521914 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 56565624 56565646 -146519886 + AT_rich Low_complexity Low_complexity 1 22 0 240 59 0 0 chr5 56565812 56565846 -146519686 + (A)n Simple_repeat Simple_repeat 1 34 0 655 303 19 42 chr5 56566146 56566407 -146519125 - MIR SINE MIR 0 262 8 2140 125 66 0 chr5 56566562 56566881 -146518651 - MER1A DNA MER1_type 0 529 190 180 352 57 11 chr5 56566947 56567035 -146518497 + MIR SINE MIR 23 114 -148 26 30 0 0 chr5 56567331 56567364 -146518168 + AT_rich Low_complexity Low_complexity 1 33 0 197 156 0 22 chr5 56567499 56567544 -146517988 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 237 265 24 24 chr5 56568658 56568741 -146516791 + CT-rich Low_complexity Low_complexity 6 88 0 2407 162 63 29 chr5 56571550 56572038 -146513494 - MLT1D LTR MaLR 0 505 1 644 242 119 98 chr5 56572356 56572744 -146512788 - LTR33 LTR ERVL 0 521 126 297 146 0 18 chr5 56572824 56572879 -146512653 - MIR SINE MIR -27 235 182 409 129 29 0 chr5 56572894 56572964 -146512568 + HY3 scRNA scRNA 29 100 -1 286 322 60 40 chr5 56572997 56573146 -146512386 - MIR SINE MIR -109 153 2 186 359 16 0 chr5 56574367 56574431 -146511101 + L2 LINE L2 3116 3180 -92 660 214 23 35 chr5 56574608 56574781 -146510751 - MER104 DNA Tc2 -9 171 1 324 0 0 0 chr5 56575701 56575737 -146509795 + (CA)n Simple_repeat Simple_repeat 2 37 0 338 322 53 26 chr5 56577312 56577464 -146508068 - MIR3 SINE MIR -45 163 8 318 337 166 12 chr5 56578869 56579032 -146506500 + MIR SINE MIR 1 188 -74 1666 167 105 45 chr5 56579649 56580208 -146505324 - MER4A LTR ERV1 -9 456 1 212 274 104 57 chr5 56583781 56583887 -146501645 - MIR SINE MIR -151 111 1 26 0 0 0 chr5 56584125 56584151 -146501381 + AT_rich Low_complexity Low_complexity 1 26 0 438 303 74 0 chr5 56584731 56584893 -146500639 + MER5B DNA MER1_type 5 178 0 331 301 224 0 chr5 56584912 56585055 -146500477 + MER5A DNA MER1_type 12 186 -3 245 362 92 57 chr5 56586323 56586782 -146498750 - L2 LINE L2 -417 2897 2423 313 328 92 11 chr5 56588498 56588672 -146496860 - MIR SINE MIR -4 258 71 22 0 0 0 chr5 56588761 56588783 -146496749 + AT_rich Low_complexity Low_complexity 1 22 0 327 130 0 0 chr5 56589848 56589902 -146495630 + (T)n Simple_repeat Simple_repeat 1 54 0 406 242 92 42 chr5 56589949 56590069 -146495463 - MIR3 SINE MIR 0 208 83 409 297 83 44 chr5 56590367 56590596 -146494936 - L2 LINE L2 -1 3271 3034 1996 120 13 7 chr5 56590703 56591003 -146494529 - AluSx SINE Alu -10 302 1 330 239 67 67 chr5 56592440 56592574 -146492958 + MIR3 SINE MIR 61 194 -14 605 208 82 19 chr5 56593074 56593233 -146492299 + MER5B DNA MER1_type 7 175 -3 390 305 80 65 chr5 56593745 56593945 -146491587 + MIR SINE MIR 14 216 -46 252 0 0 0 chr5 56593990 56594018 -146491514 + (T)n Simple_repeat Simple_repeat 1 28 0 21 36 0 0 chr5 56594212 56594240 -146491292 + AT_rich Low_complexity Low_complexity 1 28 0 218 255 0 0 chr5 56595159 56595210 -146490322 + MIR SINE MIR 30 80 -182 1794 151 34 0 chr5 56595340 56595631 -146489901 - AluSx SINE Alu -5 307 7 459 150 130 0 chr5 56596551 56596651 -146488881 + MER53 DNA DNA 77 189 0 185 283 268 5 chr5 56597184 56597389 -146488143 + MIR SINE MIR 1 259 -3 237 276 127 11 chr5 56598435 56598563 -146486969 + MIR3 SINE MIR 5 149 -82 836 260 4 51 chr5 56599044 56599279 -146486253 - MER58A DNA MER1_type 0 224 1 234 167 42 0 chr5 56600097 56600152 -146485380 - MLT1I LTR MaLR -34 412 316 6163 33 1 0 chr5 56600266 56601363 -146484169 - L1P2 LINE L1 -420 5735 4637 3270 24 0 0 chr5 56601363 56601736 -146483796 + L1PA4 LINE L1 5775 6154 -1 227 385 26 8 chr5 56603362 56603479 -146482053 - MIR SINE MIR -56 206 88 315 307 31 88 chr5 56604011 56604203 -146481329 + MIR3 SINE MIR 20 200 -8 2105 121 0 10 chr5 56604404 56604702 -146480830 - AluSx SINE Alu -12 300 6 22 70 0 0 chr5 56605306 56605349 -146480183 + AT_rich Low_complexity Low_complexity 1 43 0 2058 147 3 0 chr5 56605486 56605792 -146479740 - AluSx SINE Alu -5 307 1 439 198 0 0 chr5 56605990 56606081 -146479451 + L1MD1 LINE L1 6147 6237 -5 4077 186 18 34 chr5 56606145 56606484 -146479048 - L1MB5 LINE L1 -14 6160 5817 13856 117 50 37 chr5 56606484 56606839 -146478693 + Tigger1 DNA MER2_type 2 351 -2067 2162 124 7 0 chr5 56606839 56607145 -146478387 + AluSg SINE Alu 1 308 -2 13856 117 50 37 chr5 56607145 56609176 -146476356 + Tigger1 DNA MER2_type 351 2418 0 4077 186 18 34 chr5 56609176 56609727 -146475805 - L1MB5 LINE L1 -357 5817 5284 266 150 133 0 chr5 56609781 56609841 -146475691 + L1ME3A LINE L1 6052 6119 -51 1650 181 30 93 chr5 56609879 56610372 -146475160 - MLT1C LTR MaLR 0 467 6 765 186 8 0 chr5 56610445 56610569 -146474963 + AluSq/x SINE Alu 1 125 -188 2224 108 3 3 chr5 56612338 56612635 -146472897 - AluSx SINE Alu -15 297 1 228 374 26 17 chr5 56612886 56613001 -146472531 + L2 LINE L2 3153 3268 -4 229 260 0 82 chr5 56613650 56613723 -146471809 + MIR3 SINE MIR 133 199 -9 462 18 0 0 chr5 56613971 56614026 -146471506 + (TG)n Simple_repeat Simple_repeat 2 56 0 2019 159 0 0 chr5 56614125 56614420 -146471112 + AluSx SINE Alu 1 295 -17 862 232 25 15 chr5 56615435 56615633 -146469899 - MLT1B LTR MaLR 0 390 191 855 150 23 13 chr5 56615667 56615971 -146469561 + GA-rich Low_complexity Low_complexity 1 307 0 643 219 69 12 chr5 56615985 56616145 -146469387 - MLT1B LTR MaLR -217 173 5 1733 190 0 0 chr5 56620049 56620365 -146465167 + AluJb SINE Alu 1 316 0 195 257 57 95 chr5 56621106 56621211 -146464321 - L3 LINE CR1 -847 730 630 23 0 0 0 chr5 56621272 56621295 -146464237 + AT_rich Low_complexity Low_complexity 1 23 0 245 163 41 20 chr5 56623849 56623898 -146461634 - MIR SINE MIR -63 145 96 2172 115 0 20 chr5 56623921 56624225 -146461307 - AluSx SINE Alu -14 298 1 207 0 0 0 chr5 56624937 56624960 -146460572 + (TTTTTA)n Simple_repeat Simple_repeat 5 27 0 368 350 17 0 chr5 56625002 56625122 -146460410 + MIR SINE MIR 31 152 -56 180 111 0 0 chr5 56625165 56625192 -146460340 + (TTA)n Simple_repeat Simple_repeat 3 29 0 318 339 16 8 chr5 56625730 56625851 -146459681 + MIR SINE MIR 81 202 -60 366 262 12 0 chr5 56626672 56626756 -146458776 - MER5A DNA MER1_type -86 103 19 954 203 53 0 chr5 56626826 56627033 -146458499 + MER20 DNA MER1_type 2 219 0 1759 195 20 12 chr5 56627143 56627352 -146458180 - MER7A DNA MER2_type -2692 346 133 1856 167 0 7 chr5 56627352 56627652 -146457880 + AluSx SINE Alu 1 298 -14 1759 195 20 12 chr5 56627652 56627786 -146457746 - MER7A DNA MER2_type -2905 133 2 401 252 114 8 chr5 56627786 56627909 -146457623 + L3b LINE CR1 1205 1340 -243 212 0 0 35 chr5 56628778 56628807 -146456725 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1783 139 22 8 chr5 56628811 56629078 -146456454 - AluSx SINE Alu -37 275 5 257 330 11 0 chr5 56629260 56629351 -146456181 - MIR SINE MIR 0 262 171 21 36 0 0 chr5 56629789 56629817 -146455715 + AT_rich Low_complexity Low_complexity 1 28 0 5023 40 0 0 chr5 56629817 56630416 -146455116 - L1PA5 LINE L1 -6 6148 5550 2295 101 3 0 chr5 56631236 56631533 -146453999 - AluSg SINE Alu -12 298 1 200 378 0 11 chr5 56633066 56633156 -146452376 - L2 LINE L2 -2 3311 3223 372 273 30 0 chr5 56683355 56683454 -146402078 + L2 LINE L2 2751 2852 -462 185 329 14 29 chr5 56683619 56683689 -146401843 + L2 LINE L2 3229 3297 -16 815 295 62 4 chr5 56683922 56684149 -146401383 - MIR SINE MIR 0 262 23 346 214 0 0 chr5 56684161 56684231 -146401301 + MIR SINE MIR 179 248 -14 386 320 6 17 chr5 56684449 56684621 -146400911 - L1ME LINE L1 -401 5720 5551 1350 310 60 93 chr5 56684680 56685391 -146400141 - L3 LINE CR1 -245 1332 662 2454 87 0 0 chr5 56685391 56685700 -146399832 + AluSc SINE Alu 1 309 0 1350 310 60 93 chr5 56685700 56686002 -146399530 - L3 LINE CR1 -915 662 352 245 275 0 22 chr5 56686292 56686383 -146399149 - L1MC4 LINE L1 -1339 6703 6615 1913 167 3 0 chr5 56686714 56687013 -146398519 + AluJo SINE Alu 1 300 -12 1257 85 6 23 chr5 56687059 56687236 -146398296 + AluSp SINE Alu 1 174 -139 21 0 0 0 chr5 56687663 56687684 -146397848 + AT_rich Low_complexity Low_complexity 1 21 0 1543 244 61 80 chr5 56687859 56688706 -146396826 - L1ME LINE L1 -5228 842 12 1903 172 0 6 chr5 56691009 56691323 -146394209 - AluSx SINE Alu 0 312 1 206 286 0 43 chr5 56692606 56692676 -146392856 + CT-rich Low_complexity Low_complexity 3 69 0 421 281 107 39 chr5 56692690 56692868 -146392664 - MIR3 SINE MIR -4 204 15 348 311 25 0 chr5 56693906 56694028 -146391504 - L2 LINE L2 0 3272 3148 378 256 16 85 chr5 56694078 56694166 -146391366 + MER5A DNA MER1_type 70 148 -41 2146 136 0 0 chr5 56694166 56694474 -146391058 - AluSp SINE Alu -5 308 1 378 256 16 85 chr5 56694474 56694514 -146391018 + MER5A DNA MER1_type 148 189 0 212 293 60 87 chr5 56694549 56694699 -146390833 + L2 LINE L2 3165 3310 -3 21 36 0 0 chr5 56694775 56694803 -146390729 + AT_rich Low_complexity Low_complexity 1 28 0 213 136 0 23 chr5 56695195 56695239 -146390293 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 301 224 0 59 chr5 56696200 56696285 -146389247 + MER116 DNA Mariner 1 80 0 211 294 0 0 chr5 56696616 56696667 -146388865 + GA-rich Low_complexity Low_complexity 2 52 0 548 42 0 0 chr5 56697633 56697704 -146387828 - AluSg/x SINE Alu -74 236 166 25 0 0 0 chr5 56698957 56698982 -146386550 + AT_rich Low_complexity Low_complexity 1 25 0 263 233 0 0 chr5 56699024 56699084 -146386448 - MSTB2 LTR MaLR -5 452 393 807 228 180 27 chr5 56699197 56699491 -146386041 - MSTB2 LTR MaLR -118 339 1 326 227 13 0 chr5 56700217 56700292 -146385240 - MER103 DNA DNA -90 76 1 278 71 24 0 chr5 56701402 56701444 -146384088 + MADE1 DNA Mariner 2 44 -36 21 0 0 0 chr5 56703389 56703410 -146382122 + AT_rich Low_complexity Low_complexity 1 21 0 205 222 0 37 chr5 56704177 56704231 -146381301 + GA-rich Low_complexity Low_complexity 3 54 0 208 299 124 102 chr5 56704316 56704728 -146380804 + L2 LINE L2 2804 3224 -48 2379 76 0 10 chr5 56707339 56707640 -146377892 + AluSq SINE Alu 1 298 -15 887 192 174 5 chr5 56707668 56707892 -146377640 - MER31A LTR ERV1 -9 476 215 2149 255 148 12 chr5 56707906 56708640 -146376892 - MER21B LTR ERV1 -11 852 19 367 220 10 90 chr5 56708640 56708740 -146376792 - MER21B LTR ERV1 -759 104 13 1136 218 7 98 chr5 56708746 56709154 -146376378 - MER93b LTR ERV1 0 373 3 930 238 0 0 chr5 56709188 56709373 -146376159 - MER31B LTR ERV1 -281 185 1 272 258 43 21 chr5 56709389 56709482 -146376050 - L1MC4 LINE L1 -21 8021 7927 2065 52 4 19 chr5 56709947 56710214 -146375318 - AluY SINE Alu -8 303 41 320 288 72 0 chr5 56711253 56711364 -146374168 + L2 LINE L2 3186 3304 -9 222 218 34 34 chr5 56711364 56711511 -146374021 + GA-rich Low_complexity Low_complexity 4 150 0 2194 109 0 3 chr5 56712286 56712579 -146372953 - AluSx SINE Alu -20 292 1 23 0 0 0 chr5 56713241 56713264 -146372268 + AT_rich Low_complexity Low_complexity 1 23 0 730 209 91 144 chr5 56713578 56713769 -146371763 - L1ME2 LINE L1 -1 6163 5964 3651 154 11 9 chr5 56713769 56714430 -146371102 - L1MA4 LINE L1 -6 6294 5633 730 209 91 144 chr5 56714430 56714732 -146370800 - L1ME2 LINE L1 -200 5964 5696 189 0 0 0 chr5 56714734 56714755 -146370777 + (A)n Simple_repeat Simple_repeat 1 21 0 25 31 0 0 chr5 56714827 56714859 -146370673 + AT_rich Low_complexity Low_complexity 1 32 0 3724 202 37 34 chr5 56715078 56716089 -146369443 + L1ME1 LINE L1 5159 6334 0 333 324 45 0 chr5 56720420 56720531 -146365001 - L2 LINE L2 -2 3270 3155 464 316 86 72 chr5 56720688 56721093 -146364439 + L3 LINE CR1 885 1295 -282 221 345 190 14 chr5 56721105 56721247 -146364285 - MIR3 SINE MIR -17 191 25 286 333 156 0 chr5 56721303 56721483 -146364049 - L2 LINE L2 -22 3291 3084 198 343 14 29 chr5 56721461 56721531 -146364001 + L3b LINE CR1 1507 1575 -8 * 532 261 43 36 chr5 56721638 56721914 -146363618 + L1ME LINE L1 5545 5822 -299 554 303 99 5 chr5 56721993 56722203 -146363329 + MIR SINE MIR 36 262 0 1735 219 57 25 chr5 56722275 56722764 -146362768 + MLT1D LTR MaLR 1 505 0 2267 108 0 3 chr5 56723879 56724193 -146361339 - AluSq SINE Alu 0 313 1 255 31 0 0 chr5 56724601 56724633 -146360899 + (CA)n Simple_repeat Simple_repeat 2 33 0 295 345 34 8 chr5 56725112 56725231 -146360301 - L3 LINE CR1 -175 1402 1281 2440 54 3 0 chr5 56725966 56726260 -146359272 + AluY SINE Alu 3 297 -14 370 303 86 73 chr5 56726276 56726659 -146358873 + L1ME LINE L1 5379 5766 -355 238 349 19 9 chr5 56727702 56727808 -146357724 - L2 LINE L2 -456 2858 2752 336 208 14 0 chr5 56729162 56729234 -146356298 - Charlie8 DNA MER1_type -2201 216 144 21 36 0 0 chr5 56730902 56730930 -146354602 + AT_rich Low_complexity Low_complexity 1 28 0 323 231 8 60 chr5 56731965 56732082 -146353450 + L1MC4 LINE L1 6611 6721 -1321 487 93 3 93 chr5 56732158 56732548 -146352984 + (TA)n Simple_repeat Simple_repeat 1 354 0 461 113 9 82 chr5 56732569 56733638 -146351894 + (TA)n Simple_repeat Simple_repeat 1 991 0 274 152 28 65 chr5 56733661 56733948 -146351584 + (TA)n Simple_repeat Simple_repeat 1 305 -12 270 0 0 0 chr5 56733948 56733978 -146351554 + (TG)n Simple_repeat Simple_repeat 2 31 0 274 152 28 65 chr5 56733978 56733991 -146351541 + (TA)n Simple_repeat Simple_repeat 305 317 0 2323 79 0 0 chr5 56733991 56734282 -146351250 - AluY SINE Alu -20 291 1 1868 71 8 4 chr5 56735594 56735832 -146349700 + AluSg SINE Alu 2 240 -70 22 35 0 0 chr5 56737359 56737388 -146348144 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr5 56737515 56737559 -146347973 + AT_rich Low_complexity Low_complexity 1 44 0 353 235 75 132 chr5 56738482 56739105 -146346427 + HAL1b LINE L1 1228 1348 0 356 315 92 22 chr5 56739325 56739509 -146346023 + MIR SINE MIR 28 224 -38 27 81 0 0 chr5 56741109 56741171 -146344361 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr5 56742223 56742244 -146343288 + AT_rich Low_complexity Low_complexity 1 21 0 436 304 53 18 chr5 56742980 56743151 -146342381 + MIR SINE MIR 32 208 -54 2228 89 0 0 chr5 56743254 56743567 -146341965 + AluSx SINE Alu 1 313 0 337 312 143 50 chr5 56745435 56746106 -146339426 - L2 LINE L2 -107 3165 2438 28 48 0 0 chr5 56747329 56747371 -146338161 + AT_rich Low_complexity Low_complexity 1 42 0 2113 93 0 24 chr5 56747556 56747847 -146337685 + AluSc SINE Alu 1 284 -25 207 0 0 0 chr5 56747847 56747870 -146337662 + (TTA)n Simple_repeat Simple_repeat 3 25 0 453 263 40 29 chr5 56748139 56748314 -146337218 + MER104 DNA Tc2 1 177 -3 312 331 33 0 chr5 56748339 56748460 -146337072 - MIR SINE MIR -135 127 3 301 339 108 0 chr5 56748465 56748595 -146336937 - MIR SINE MIR -3 259 116 1751 192 28 6 chr5 56749042 56749396 -146336136 + MLT1A1 LTR MaLR 1 415 -13 1010 189 4 63 chr5 56749647 56749885 -146335647 - L1MB8 LINE L1 -6 6172 5949 1162 171 66 4 chr5 56749885 56750290 -146335242 - LTR54 LTR ERV1 -19 491 1 1996 165 37 3 chr5 56750294 56750645 -146334887 - MLT1A1 LTR MaLR -2 363 1 250 350 0 0 chr5 56751488 56751568 -146333964 + L2 LINE L2 3234 3313 0 241 299 0 45 chr5 56751614 56751681 -146333851 - L2 LINE L2 -8 3305 3242 534 265 166 14 chr5 56752415 56752638 -146332894 - MIR SINE MIR 0 262 6 205 245 20 0 chr5 56752665 56752714 -146332818 + (TA)n Simple_repeat Simple_repeat 1 50 0 289 296 17 78 chr5 56752883 56752998 -146332534 + MER5A DNA MER1_type 37 144 -45 227 308 0 44 chr5 56753055 56753146 -146332386 + MER5B DNA MER1_type 3 89 -89 875 150 104 17 chr5 56753413 56753586 -146331946 + MER5A DNA MER1_type 1 188 -1 23 0 0 0 chr5 56754011 56754034 -146331498 + AT_rich Low_complexity Low_complexity 1 23 0 471 295 33 0 chr5 56754067 56754189 -146331343 - MIR SINE MIR -70 192 67 781 213 6 0 chr5 56754236 56754396 -146331136 - L1MA5A LINE L1 -5 6292 6132 43 71 0 0 chr5 56755345 56755430 -146330102 + AT_rich Low_complexity Low_complexity 1 85 0 251 326 11 0 chr5 56756362 56756451 -146329081 - L1ME LINE L1 -403 5718 5629 300 252 47 63 chr5 56756487 56756614 -146328918 + L1ME4a LINE L1 5621 5745 -376 528 295 36 26 chr5 56756733 56756926 -146328606 + MIR SINE MIR 67 261 -1 297 207 345 10 chr5 56756962 56757165 -146328367 + L1ME4a LINE L1 5850 6120 -1 2809 3 0 3 chr5 56757196 56757508 -146328024 - AluYa5 SINE Alu 0 311 1 204 125 0 0 chr5 56758281 56758313 -146327219 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 1641 230 41 37 chr5 56758897 56759357 -146326175 - MLT1C LTR MaLR 0 467 6 2187 123 0 0 chr5 56760125 56760435 -146325097 - AluSx SINE Alu -2 310 1 223 239 0 0 chr5 56761216 56761262 -146324270 - L2 LINE L2 -10 3303 3258 22 35 0 0 chr5 56761594 56761623 -146323909 + AT_rich Low_complexity Low_complexity 1 29 0 1581 36 5 15 chr5 56761638 56761833 -146323699 - AluY SINE Alu -9 302 110 6097 172 32 14 chr5 56762024 56763765 -146321767 - L1PA16 LINE L1 -3 7601 5812 2382 58 0 36 chr5 56763765 56764073 -146321459 - AluY SINE Alu -14 297 1 6097 172 32 14 chr5 56764073 56764487 -146321045 - L1PA16 LINE L1 -1792 5812 5407 787 260 68 7 chr5 56764492 56764784 -146320748 - L1PA16 LINE L1 -5090 2491 2182 357 260 10 0 chr5 56764985 56765081 -146320451 - L1PA16 LINE L1 -5399 2182 2086 1033 322 54 44 chr5 56765177 56765788 -146319744 - L1PA16 LINE L1 -6170 1404 788 23 0 0 0 chr5 56765930 56765953 -146319579 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 56766859 56766880 -146318652 + AT_rich Low_complexity Low_complexity 1 21 0 291 314 20 19 chr5 56767377 56767483 -146318049 + MIR3 SINE MIR 71 177 -31 635 190 0 17 chr5 56767483 56767599 -146317933 + FLAM_A SINE Alu 1 114 -19 242 189 0 81 chr5 56768732 56768806 -146316726 + L1ME LINE L1 5750 5817 -347 23 0 0 0 chr5 56770277 56770300 -146315232 + AT_rich Low_complexity Low_complexity 1 23 0 457 254 129 68 chr5 56770419 56770666 -146314866 - MIR SINE MIR -6 256 5 384 301 123 6 chr5 56770669 56770832 -146314700 - MIR SINE MIR -79 183 2 2453 75 7 0 chr5 56773144 56773451 -146312081 + AluSc SINE Alu 1 309 0 21 0 0 0 chr5 56774739 56774760 -146310772 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 56775215 56775246 -146310286 + AT_rich Low_complexity Low_complexity 1 31 0 596 226 52 61 chr5 56776399 56776611 -146308921 + MER63A DNA MER1_type 1 210 0 252 0 0 0 chr5 56776647 56776675 -146308857 + (TAGA)n Simple_repeat Simple_repeat 3 30 0 261 209 0 0 chr5 56777216 56777283 -146308249 + (TA)n Simple_repeat Simple_repeat 2 68 0 25 65 0 0 chr5 56780837 56780883 -146304649 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr5 56781567 56781602 -146303930 + AT_rich Low_complexity Low_complexity 1 35 0 940 242 8 6 chr5 56781986 56782308 -146303224 + L1MEc LINE L1 2153 2432 -3783 639 342 4 4 chr5 56783525 56783750 -146301782 - MIR SINE MIR -7 255 31 219 170 19 57 chr5 56783838 56783891 -146301641 + L2 LINE L2 3263 3313 0 2223 172 15 128 chr5 56783907 56783991 -146301541 - MLT2B1 LTR ERVL 0 520 428 441 0 0 0 chr5 56783991 56784040 -146301492 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 0 0 0 chr5 56784039 56784063 -146301469 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 2223 172 15 128 chr5 56784040 56784564 -146300968 - MLT2B1 LTR ERVL -92 428 1 7153 161 9 14 chr5 56784564 56785845 -146299687 - ERVL-B1 LTR ERVL -7 5757 4483 318 330 78 31 chr5 56785914 56786105 -146299427 - L3 LINE CR1 -6 1571 1372 2241 116 0 0 chr5 56786432 56786725 -146298807 + AluSx SINE Alu 1 293 -19 14997 88 9 2 chr5 56787077 56789968 -146295564 - L1PA7 LINE L1 -8 6146 3233 2018 132 3 7 chr5 56790865 56791168 -146294364 + AluSx SINE Alu 1 302 -10 188 247 14 82 chr5 56791469 56791542 -146293990 + L2 LINE L2 2976 3043 -229 22 35 0 0 chr5 56792755 56792784 -146292748 + AT_rich Low_complexity Low_complexity 1 29 0 198 284 55 46 chr5 56793614 56793723 -146291809 + MIR SINE MIR 112 221 -41 22 0 0 0 chr5 56794794 56794816 -146290716 + AT_rich Low_complexity Low_complexity 1 22 0 219 234 16 78 chr5 56797251 56797315 -146288217 + L2 LINE L2 3143 3202 -70 598 110 30 10 chr5 56799088 56799188 -146286344 + L1MC1 LINE L1 6232 6333 0 27 81 0 0 chr5 56799953 56800015 -146285517 + AT_rich Low_complexity Low_complexity 1 62 0 436 224 12 73 chr5 56802653 56802818 -146282714 + FRAM SINE Alu 1 151 -25 1470 208 120 3 chr5 56804033 56804384 -146281148 - MSTD LTR MaLR 0 396 5 578 281 33 54 chr5 56804577 56804735 -146280797 + MIR SINE MIR 2 155 -107 1832 145 13 40 chr5 56804735 56805038 -146280494 + AluSx SINE Alu 1 295 -17 578 281 33 54 chr5 56805038 56805121 -146280411 + MIR SINE MIR 155 238 -24 252 288 127 17 chr5 56805822 56805940 -146279592 - MIR SINE MIR -65 197 67 336 352 47 0 chr5 56806940 56807068 -146278464 + MIR SINE MIR 71 204 -58 709 221 31 79 chr5 56807502 56807756 -146277776 - MIR SINE MIR 0 262 21 334 208 39 13 chr5 56807760 56807837 -146277695 - MER58 DNA MER1_type 0 2420 2342 255 243 48 58 chr5 56807923 56808026 -146277506 - MIR SINE MIR -54 208 107 1484 69 0 21 chr5 56808137 56808326 -146277206 - AluY SINE Alu -126 185 1 2120 114 7 10 chr5 56808563 56808861 -146276671 - AluSg SINE Alu -13 297 1 306 279 149 32 chr5 56810679 56810833 -146274699 + MIR SINE MIR 21 192 -70 447 313 22 0 chr5 56813986 56814120 -146271412 + MIR SINE MIR 40 176 -86 320 291 97 29 chr5 56816356 56816531 -146269001 + MIR SINE MIR 10 196 -66 1995 125 14 0 chr5 56818774 56819055 -146266477 - AluY SINE Alu -26 285 1 253 216 112 0 chr5 56819055 56819140 -146266392 + MLT2B2 LTR ERVL 239 372 -143 1200 124 40 0 chr5 56819150 56819352 -146266180 + ERVL LTR ERVL 4766 4975 -789 197 225 0 0 chr5 56819484 56819524 -146266008 + L2 LINE L2 3226 3265 -7 586 184 36 18 chr5 56819538 56819706 -146265826 + ERVL LTR ERVL 4964 5134 -630 1631 157 11 31 chr5 56826059 56826346 -146259186 - AluJb SINE Alu -31 281 1 298 320 67 42 chr5 56827878 56828162 -146257370 - HAL1b LINE L1 -837 511 221 228 218 18 55 chr5 56829009 56829119 -146256413 + T-rich Low_complexity Low_complexity 3 108 0 749 234 30 10 chr5 56829565 56829762 -146255770 + MER2 DNA MER2_type 1 201 -144 615 239 81 62 chr5 56829762 56830021 -146255511 + MER21B LTR ERV1 395 658 -205 1929 221 55 4 chr5 56830027 56830521 -146255011 - L1 LINE L1 -760 5386 4868 1914 104 60 27 chr5 56833640 56833939 -146251593 - AluSx SINE Alu -3 309 1 780 153 69 0 chr5 56833958 56834102 -146251430 - L1MB2 LINE L1 -342 5829 5676 502 275 62 6 chr5 56835564 56835724 -146249808 - MER5B DNA MER1_type -9 169 1 38 39 0 0 chr5 56837108 56837160 -146248372 + AT_rich Low_complexity Low_complexity 1 52 0 222 0 51 26 chr5 56837228 56837267 -146248265 + (CTA)n Simple_repeat Simple_repeat 3 42 0 229 35 53 53 chr5 56837388 56837445 -146248087 + (CTA)n Simple_repeat Simple_repeat 3 59 0 186 67 67 0 chr5 56837461 56837506 -146248026 + (TA)n Simple_repeat Simple_repeat 1 48 0 2089 108 7 0 chr5 56837506 56837793 -146247739 - AluSx SINE Alu -23 289 1 16860 111 10 3 chr5 56838075 56840565 -146244967 - L1P3 LINE L1 -2419 4042 1534 * 40257 71 11 10 chr5 56840549 56846693 -146238839 - L1PA5 LINE L1 0 6154 2 11756 91 1 16 chr5 56846689 56848280 -146237252 - L1P3 LINE L1 -4892 1569 3 * 1343 232 50 6 chr5 56848521 56848883 -146236649 + L1ME1 LINE L1 5765 6142 -24 223 288 68 68 chr5 56849604 56849736 -146235796 + L2 LINE L2 3136 3267 -5 1891 193 21 13 chr5 56850302 56850681 -146234851 - L1ME1 LINE L1 -6 6160 5779 22 35 0 0 chr5 56850997 56851026 -146234506 + AT_rich Low_complexity Low_complexity 1 29 0 1167 207 155 37 chr5 56851663 56851986 -146233546 - MLT1A1 LTR MaLR -3 362 2 2054 121 7 36 chr5 56852384 56852689 -146232843 + AluSx SINE Alu 1 296 -16 252 290 0 0 chr5 56852871 56852933 -146232599 + L2 LINE L2 3252 3313 0 297 264 0 55 chr5 56854283 56854374 -146231158 - L2 LINE L2 -1 3312 3227 320 125 0 0 chr5 56854492 56854540 -146230992 - MADE1 DNA Mariner 0 80 33 205 175 0 0 chr5 56854629 56854669 -146230863 + CT-rich Low_complexity Low_complexity 1 40 0 1580 159 33 18 chr5 56854776 56855052 -146230480 + AluJo SINE Alu 26 305 -7 25 51 0 0 chr5 56855685 56855724 -146229808 + AT_rich Low_complexity Low_complexity 1 39 0 181 318 158 64 chr5 56856055 56856366 -146229166 - L2 LINE L2 -410 2904 2565 749 176 27 8 chr5 56856672 56856846 -146228686 + Charlie1a DNA MER1_type 36 258 -1197 1890 180 90 2 chr5 56856870 56857271 -146228261 + Charlie1a DNA MER1_type 880 1315 -140 240 91 0 0 chr5 56857268 56857301 -146228231 + Charlie1a DNA MER1_type 1417 1449 -6 * 280 169 0 17 chr5 56857381 56857440 -146228092 - Charlie1a DNA MER1_type -1 1454 1397 198 0 0 0 chr5 56858595 56858617 -146226915 + (CA)n Simple_repeat Simple_repeat 1 22 0 201 216 0 81 chr5 56859103 56859177 -146226355 + (CGGGG)n Simple_repeat Simple_repeat 2 69 0 303 104 0 0 chr5 56859685 56859733 -146225799 + (CA)n Simple_repeat Simple_repeat 2 49 0 261 337 69 11 chr5 56861865 56862040 -146223492 + L2 LINE L2 1536 1720 -1594 264 303 248 22 chr5 56862048 56862692 -146222840 + L2 LINE L2 1990 2779 -535 209 182 18 0 chr5 56862760 56862815 -146222717 + (CA)n Simple_repeat Simple_repeat 2 57 0 346 287 206 22 chr5 56864298 56864570 -146220962 + MLT1L LTR MaLR 168 489 -126 1039 306 97 46 chr5 56865059 56865893 -146219639 - L2 LINE L2 -496 2818 1942 21 57 0 0 chr5 56867826 56867861 -146217671 + AT_rich Low_complexity Low_complexity 1 35 0 2030 103 60 20 chr5 56868072 56868372 -146217160 + AluSx SINE Alu 1 312 0 238 232 174 14 chr5 56869099 56869168 -146216364 + L2 LINE L2 3184 3263 -9 242 185 0 77 chr5 56869207 56869272 -146216260 - L1ME3A LINE L1 -5 6165 6106 2005 225 30 2 chr5 56869290 56869730 -146215802 - LTR40c LTR ERVL -13 452 1 231 227 11 80 chr5 56869760 56869848 -146215684 - L1ME3 LINE L1 -88 6074 5993 332 317 48 0 chr5 56869935 56870080 -146215452 - L1ME3 LINE L1 -219 5951 5800 463 221 138 47 chr5 56870128 56870382 -146215150 - L1M4 LINE L1 -2186 3960 3684 323 242 48 11 chr5 56870410 56870598 -146214934 - L1MDb LINE L1 -5104 1302 1128 2191 133 7 0 chr5 56870776 56871085 -146214447 - AluSx SINE Alu 0 312 2 415 125 31 0 chr5 56871128 56871192 -146214340 + U4 snRNA snRNA 1 66 -79 1065 194 5 30 chr5 56871466 56871667 -146213865 + AluJo SINE Alu 30 225 -87 198 0 0 0 chr5 56871698 56871720 -146213812 + (A)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr5 56871927 56871955 -146213577 + AT_rich Low_complexity Low_complexity 1 28 0 325 275 42 48 chr5 56872466 56872655 -146212877 - L1ME3 LINE L1 -351 5770 5583 188 242 15 76 chr5 56872818 56872884 -146212648 - L3b LINE CR1 -9 1574 1513 387 273 14 28 chr5 56873178 56873321 -146212211 - MLT1H1 LTR MaLR 0 542 402 682 242 87 38 chr5 56873347 56873611 -146211921 - MLT1H1 LTR MaLR -290 265 10 713 176 0 22 chr5 56873663 56873799 -146211733 - FLAM_C SINE Alu 0 133 1 807 185 0 110 chr5 56873831 56874058 -146211474 - MER20 DNA MER1_type -17 202 1 264 30 0 0 chr5 56874742 56874775 -146210757 + (T)n Simple_repeat Simple_repeat 1 33 0 1760 126 8 0 chr5 56875183 56875437 -146210095 + AluSx SINE Alu 42 297 -15 378 294 110 12 chr5 56875524 56875687 -146209845 - MIR SINE MIR 0 262 84 2039 75 14 7 chr5 56875787 56876067 -146209465 + L1PA10 LINE L1 5877 6158 -10 449 223 11 11 chr5 56876428 56876522 -146209010 - L2 LINE L2 -5 3308 3215 256 232 29 14 chr5 56876534 56876603 -146208929 + MER69 DNA AcHobo 1 70 -2456 689 282 101 11 chr5 56876690 56877055 -146208477 + MER69 DNA AcHobo 1914 2311 -215 220 204 23 0 chr5 56877329 56877373 -146208159 + GA-rich Low_complexity Low_complexity 1 45 0 1614 196 30 48 chr5 56877912 56878309 -146207223 - MLT1B LTR MaLR 0 390 1 1580 210 24 22 chr5 56878650 56879065 -146206467 - LTR40c LTR ERVL 0 465 50 318 286 20 20 chr5 56879066 56879164 -146206368 + MLT1D LTR MaLR 1 98 -407 1223 190 78 24 chr5 56879169 56879501 -146206031 + MLT1D-int LTR MaLR 248 597 -774 22 0 0 0 chr5 56879501 56879523 -146206009 + AT_rich Low_complexity Low_complexity 1 22 0 622 205 24 16 chr5 56879529 56879824 -146205708 + MLT1A2 LTR MaLR 1 362 -12 2485 232 83 50 chr5 56879858 56880596 -146204936 + MLT1D-int LTR MaLR 609 1370 -1 1457 192 156 37 chr5 56880598 56881035 -146204497 + MLT1D LTR MaLR 14 502 -3 235 214 0 36 chr5 56881036 56881092 -146204440 - LTR40c LTR ERVL -410 55 2 24 32 0 0 chr5 56882224 56882255 -146203277 + AT_rich Low_complexity Low_complexity 1 31 0 16308 202 15 9 chr5 56882339 56887574 -146197958 - L1P4 LINE L1 -404 6412 1132 3020 228 40 55 chr5 56887581 56888484 -146197048 - L1P4 LINE L1 -5898 889 1 2130 105 0 7 chr5 56888623 56888958 -146196574 + AluSx SINE Alu 1 333 0 28 48 0 0 chr5 56888991 56889033 -146196499 + AT_rich Low_complexity Low_complexity 1 42 0 2372 173 33 54 chr5 56889127 56889378 -146196154 + MER44D DNA MER2_type 41 296 -2191 2029 136 0 0 chr5 56889378 56889672 -146195860 - AluSx SINE Alu -18 294 1 2372 173 33 54 chr5 56889672 56889941 -146195591 + MER44D DNA MER2_type 296 605 0 202 339 46 0 chr5 56889949 56890014 -146195518 + L2 LINE L2 3245 3312 -1 2149 111 3 40 chr5 56890488 56890840 -146194692 - AluSx SINE Alu 0 340 1 819 210 32 6 chr5 56892055 56892212 -146193320 - FRAM SINE Alu -16 160 1 1377 193 20 0 chr5 56892417 56892671 -146192861 - AluJo SINE Alu -11 301 43 438 320 150 20 chr5 56893134 56893481 -146192051 + L2 LINE L2 2916 3307 -6 285 295 0 66 chr5 56893954 56894076 -146191456 + MIR SINE MIR 82 195 -67 308 270 102 22 chr5 56894145 56894282 -146191250 + L1ME4a LINE L1 5956 6103 -18 655 277 183 24 chr5 56894308 56894751 -146190781 - L2 LINE L2 -54 3259 2748 340 307 74 70 chr5 56896249 56896464 -146189068 + MIR SINE MIR 47 262 0 1853 179 3 0 chr5 56897646 56897947 -146187585 + AluJo SINE Alu 1 302 -10 999 302 180 17 chr5 56898422 56898836 -146186696 + L2 LINE L2 2223 2568 -745 2229 117 0 0 chr5 56898836 56899135 -146186397 + AluSx SINE Alu 1 299 -13 999 302 180 17 chr5 56899135 56899653 -146185879 + L2 LINE L2 2568 3313 0 22 0 0 0 chr5 56902007 56902029 -146183503 + AT_rich Low_complexity Low_complexity 1 22 0 411 326 16 0 chr5 56902252 56902381 -146183151 - MIR SINE MIR -72 190 60 31 0 0 0 chr5 56902468 56902499 -146183033 + AT_rich Low_complexity Low_complexity 1 31 0 267 296 12 0 chr5 56902675 56902756 -146182776 + MIR SINE MIR 36 117 -91 2168 106 3 7 chr5 56902832 56903125 -146182407 + AluSx SINE Alu 1 292 -20 233 29 0 29 chr5 56903426 56903461 -146182071 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1041 171 0 12 chr5 56903461 56903611 -146181921 - AluSg/x SINE Alu -29 281 132 2186 101 10 7 chr5 56903611 56903908 -146181624 - AluY SINE Alu -13 298 1 1041 171 0 12 chr5 56903908 56903921 -146181611 - AluSg/x SINE Alu -178 132 120 585 112 22 0 chr5 56904178 56904267 -146181265 + AluSg/x SINE Alu 205 295 -17 231 277 21 32 chr5 56904815 56904909 -146180623 + MIR SINE MIR 120 212 -50 1392 272 102 33 chr5 56905716 56905890 -146179642 + L2 LINE L2 2304 2464 -849 315 0 0 0 chr5 56905890 56905925 -146179607 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1392 272 102 33 chr5 56905925 56906666 -146178866 + L2 LINE L2 2464 3282 -31 250 294 200 0 chr5 56906669 56906754 -146178778 - MER91C DNA MER1_type -3 137 36 342 321 61 8 chr5 56908494 56908625 -146176907 + MIR3 SINE MIR 9 146 -62 1836 166 7 14 chr5 56908654 56908943 -146176589 + AluSx SINE Alu 1 287 -25 1733 118 19 15 chr5 56909343 56909614 -146175918 + AluSx SINE Alu 37 308 -4 21 36 0 0 chr5 56910884 56910912 -146174620 + AT_rich Low_complexity Low_complexity 1 28 0 218 215 200 0 chr5 56911322 56911387 -146174145 + MIR SINE MIR 185 262 0 1526 116 66 53 chr5 56911418 56911738 -146173794 + MER33 DNA MER1_type 1 324 0 273 333 11 0 chr5 56912821 56912914 -146172618 + L2 LINE L2 3215 3308 -5 192 226 87 61 chr5 56912904 56913019 -146172513 - L2 LINE L2 -1313 2001 1884 * 23 0 0 0 chr5 56913189 56913212 -146172320 + AT_rich Low_complexity Low_complexity 1 23 0 2351 103 3 3 chr5 56913842 56914154 -146171378 + AluSx SINE Alu 1 312 0 2275 108 0 13 chr5 56915758 56916074 -146169458 + AluSx SINE Alu 1 312 0 220 196 43 0 chr5 56916528 56916574 -146168958 + GA-rich Low_complexity Low_complexity 4 51 0 535 254 11 5 chr5 56917713 56917861 -146167671 - MIR SINE MIR -9 253 106 2321 110 0 0 chr5 56918862 56919161 -146166371 - AluSq SINE Alu -14 299 1 188 194 14 139 chr5 56920328 56920400 -146165132 + L2 LINE L2 3191 3253 -19 1066 79 5 223 chr5 56921935 56922338 -146163194 - L1PA7 LINE L1 0 6154 5840 204 128 0 26 chr5 56923684 56923723 -146161809 + (TC)n Simple_repeat Simple_repeat 2 39 0 227 321 47 9 chr5 56923771 56923877 -146161655 - L2 LINE L2 -5 3308 3199 560 273 73 77 chr5 56924339 56924625 -146160907 + L1MC4a LINE L1 5575 5859 -1949 1379 90 20 10 chr5 56924664 56924865 -146160667 + L1PB1 LINE L1 5946 6148 -3 265 281 72 93 chr5 56926206 56926484 -146159048 + L1ME LINE L1 5320 5591 -530 206 288 0 0 chr5 56927837 56927896 -146157636 + (TG)n Simple_repeat Simple_repeat 1 59 0 373 310 43 9 chr5 56930389 56930505 -146155027 - MIR SINE MIR -140 122 3 192 152 0 0 chr5 56930522 56930555 -146154977 - L2 LINE L2 0 3313 3281 287 292 143 24 chr5 56931052 56931261 -146154271 - MIR SINE MIR -6 256 23 493 295 35 29 chr5 56932359 56932532 -146153000 + MER5A DNA MER1_type 13 186 -3 182 198 259 37 chr5 56932555 56932636 -146152896 + L2 LINE L2 3168 3266 -6 21 0 0 0 chr5 56934398 56934419 -146151113 + AT_rich Low_complexity Low_complexity 1 21 0 1467 188 9 52 chr5 56934447 56934772 -146150760 - AluJo SINE Alu -1 311 1 644 287 56 50 chr5 56935151 56935472 -146150060 - L2 LINE L2 0 3313 2991 21 57 0 0 chr5 56938894 56938929 -146146603 + AT_rich Low_complexity Low_complexity 1 35 0 428 260 0 0 chr5 56939246 56939342 -146146190 - MIR SINE MIR -130 132 37 193 304 58 0 chr5 56939381 56939450 -146146082 - MIR SINE MIR -19 243 171 264 359 141 6 chr5 56939508 56939678 -146145854 + MIR SINE MIR 60 252 -10 229 325 91 45 chr5 56940844 56940998 -146144534 + MER5A DNA MER1_type 7 167 -22 224 310 86 63 chr5 56940857 56941031 -146144501 - MER5A DNA MER1_type -5 184 7 * 638 219 0 8 chr5 56942116 56942244 -146143288 + L2 LINE L2 3187 3313 0 198 0 0 0 chr5 56943873 56943895 -146141637 + (A)n Simple_repeat Simple_repeat 1 22 0 222 234 0 0 chr5 56945645 56945692 -146139840 + L2 LINE L2 3251 3297 -16 238 245 19 0 chr5 56946943 56946996 -146138536 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 287 217 184 72 chr5 56946996 56947203 -146138329 - L1MC4a LINE L1 -1878 5930 5701 209 195 0 0 chr5 56948312 56948353 -146137179 - L2 LINE L2 0 3272 3232 1075 165 11 0 chr5 56948907 56949089 -146136443 - MER5A DNA MER1_type -2 187 4 318 270 45 36 chr5 56949690 56949801 -146135731 - MIR SINE MIR -10 252 141 21 0 0 0 chr5 56949807 56949828 -146135704 + AT_rich Low_complexity Low_complexity 1 21 0 484 269 50 14 chr5 56949930 56950071 -146135461 - MIR SINE MIR -112 150 5 857 71 95 8 chr5 56950136 56950262 -146135270 - MER85 DNA T2_type 0 139 3 427 280 11 79 chr5 56950923 56951112 -146134420 + MER5B DNA MER1_type 3 178 0 270 113 306 16 chr5 56951768 56951830 -146133702 - MADE1 DNA Mariner 0 80 1 188 326 0 22 chr5 56952142 56952188 -146133344 + L2 LINE L2 3249 3293 -20 1984 151 24 21 chr5 56952433 56952811 -146132721 - L1MC1 LINE L1 0 6333 5955 342 316 38 61 chr5 56952846 56953191 -146132341 - L1MC1 LINE L1 -304 5817 5481 204 227 114 57 chr5 56953563 56953651 -146131881 + MER5A DNA MER1_type 31 123 -66 1869 150 14 7 chr5 56955841 56956135 -146129397 - AluSx SINE Alu -16 296 1 275 304 68 20 chr5 56956565 56956713 -146128819 - MER5B DNA MER1_type -6 172 18 436 67 0 180 chr5 56958289 56958332 -146127200 - MADE1 DNA Mariner -7 73 52 2306 119 0 0 chr5 56958332 56958644 -146126888 + AluSx SINE Alu 1 312 0 436 67 0 180 chr5 56958644 56958689 -146126843 - MADE1 DNA Mariner -28 52 1 255 320 13 13 chr5 56959745 56959823 -146125709 + MIR3 SINE MIR 89 166 -42 323 237 86 0 chr5 56961935 56962028 -146123504 - MER5A DNA MER1_type -86 103 3 315 330 28 0 chr5 56962130 56962236 -146123296 + MIR3 SINE MIR 90 198 -10 28 0 0 0 chr5 56962541 56962569 -146122963 + AT_rich Low_complexity Low_complexity 1 28 0 704 181 17 0 chr5 56962618 56962734 -146122798 + FLAM_A SINE Alu 5 122 -11 2259 101 10 0 chr5 56962756 56963054 -146122478 + AluSg SINE Alu 1 301 -9 946 135 9 112 chr5 56963309 56963524 -146122008 - MER20 DNA MER1_type 0 219 27 302 248 193 19 chr5 56964887 56965048 -146120484 + MER5A DNA MER1_type 1 189 0 406 83 125 14 chr5 56965506 56965578 -146119954 + FLAM_A SINE Alu 31 110 -32 324 128 0 0 chr5 56967265 56967312 -146118220 + L2 LINE L2 3264 3310 -3 1109 128 56 0 chr5 56967512 56967708 -146117824 + L1MA9 LINE L1 6106 6312 0 21 0 0 0 chr5 56968020 56968041 -146117491 + AT_rich Low_complexity Low_complexity 1 21 0 845 220 51 95 chr5 56972286 56972597 -146112935 - LTR56 LTR ERV1 -25 420 132 2243 107 0 17 chr5 56972597 56972902 -146112630 + AluSx SINE Alu 10 304 -8 845 220 51 95 chr5 56972902 56973021 -146112511 - LTR56 LTR ERV1 -313 132 9 212 200 71 29 chr5 56973442 56973512 -146112020 - MIR SINE MIR -17 245 173 * 296 349 61 75 chr5 56973493 56973934 -146111598 - L2 LINE L2 -2 3270 2836 186 255 0 0 chr5 56973974 56974021 -146111511 - MIR SINE MIR -128 134 88 312 291 63 13 chr5 56974669 56974827 -146110705 - L1M4 LINE L1 -2052 4094 3929 5143 125 30 5 chr5 56975199 56976591 -146108941 + L1PA13 LINE L1 4686 6107 -56 265 228 16 150 chr5 56976624 56976751 -146108781 + MIR SINE MIR 63 172 -90 180 0 0 0 chr5 56979476 56979496 -146106036 + (CGGGGG)n Simple_repeat Simple_repeat 1 20 0 324 325 170 24 chr5 56979616 56979828 -146105704 + L1M2 LINE L1 709 951 -5898 1465 130 43 70 chr5 56980080 56980381 -146105151 - MER4A LTR ERV1 0 664 372 241 293 50 0 chr5 56981028 56981127 -146104405 + HAL1b LINE L1 280 383 -965 475 244 108 67 chr5 56981166 56981482 -146104050 + HAL1b LINE L1 446 774 -574 421 251 80 0 chr5 56981502 56981689 -146103843 + HAL1b LINE L1 890 1091 -257 309 229 125 52 chr5 56981690 56981853 -146103679 - L1MC/D LINE L1 -885 5459 5294 254 211 0 0 chr5 56982266 56982318 -146103214 + LTR30 LTR ERV1 1 52 -670 1332 80 125 0 chr5 56982318 56982518 -146103014 + LTR12 LTR ERV1 53 277 -437 331 255 10 0 chr5 56982518 56982616 -146102916 + LTR30 LTR ERV1 544 642 -80 636 94 42 0 chr5 56982619 56982715 -146102817 + LTR12 LTR ERV1 615 714 0 2167 157 50 0 chr5 56982802 56983184 -146102348 - MER57A LTR ERV1 0 403 3 27 29 0 0 chr5 56983752 56983786 -146101746 + AT_rich Low_complexity Low_complexity 1 34 0 1380 236 73 104 chr5 56983819 56984782 -146100750 - LTR1B LTR ERV1 -1 1019 1 2313 82 0 7 chr5 56985365 56985659 -146099873 - AluSx SINE Alu -12 300 9 1669 190 34 14 chr5 56986100 56986458 -146099074 + MLT1A1 LTR MaLR 1 365 0 884 235 33 0 chr5 56986596 56986809 -146098723 - MER58A DNA MER1_type 0 224 5 806 207 48 16 chr5 56987280 56987468 -146098064 + MER3 DNA MER1_type 1 194 -15 596 294 71 31 chr5 56987520 56988158 -146097374 + HAL1b LINE L1 77 766 -582 304 318 45 0 chr5 56988203 56988335 -146097197 - LTR16A1 LTR ERVL -3 454 317 335 158 37 12 chr5 56988446 56988528 -146097004 + HAL1 LINE L1 94 177 -2330 1663 198 54 8 chr5 56988620 56989121 -146096411 - LTR27 LTR ERV1 0 501 3 404 261 31 36 chr5 56989253 56989448 -146096084 + L1M4 LINE L1 2255 2448 -3698 2038 259 43 6 chr5 56989454 56990075 -146095457 - L1MEc LINE L1 -5707 689 46 303 28 0 0 chr5 56990426 56990462 -146095070 + (TC)n Simple_repeat Simple_repeat 1 36 0 1109 189 28 9 chr5 56991613 56991825 -146093707 + AluJo SINE Alu 82 297 -15 381 346 112 19 chr5 56991863 56992077 -146093455 - MIR SINE MIR -6 256 23 1843 175 0 19 chr5 56992303 56992617 -146092915 - AluJo SINE Alu -4 308 1 346 344 86 5 chr5 56992809 56992995 -146092537 - L3 LINE CR1 -11 1566 1366 1815 143 29 7 chr5 56993040 56993320 -146092212 + AluJo SINE Alu 1 286 -26 27 0 0 0 chr5 56994066 56994093 -146091439 + AT_rich Low_complexity Low_complexity 1 27 0 2183 116 0 7 chr5 56994093 56994394 -146091138 + AluSx SINE Alu 1 299 -13 309 250 0 0 chr5 56994722 56994814 -146090718 + (TA)n Simple_repeat Simple_repeat 1 92 0 211 130 78 13 chr5 56995107 56995139 -146090393 + (TA)n Simple_repeat Simple_repeat 2 30 -53 2437 128 22 0 chr5 56995139 56995506 -146090026 + THE1C LTR MaLR 1 375 0 211 130 78 13 chr5 56995506 56995550 -146089982 + (TA)n Simple_repeat Simple_repeat 30 83 0 482 304 55 17 chr5 56995571 56995752 -146089780 - MIR SINE MIR -60 202 15 255 242 32 48 chr5 56996169 56996293 -146089239 + MLT1K LTR MaLR 439 560 -28 24 0 0 0 chr5 56997690 56997714 -146087818 + AT_rich Low_complexity Low_complexity 1 24 0 681 258 70 64 chr5 56997827 56998071 -146087461 - MER102b DNA MER1_type -1096 332 84 2796 10 0 3 chr5 56998071 56998379 -146087153 - AluYb8 SINE Alu -11 307 1 681 258 70 64 chr5 56998379 56998464 -146087068 - MER102b DNA MER1_type -1344 84 1 2277 113 6 3 chr5 56999095 56999406 -146086126 - AluSx SINE Alu 0 312 1 1386 251 78 37 chr5 56999434 57000124 -146085408 + L2 LINE L2 2596 3311 -2 23 0 0 0 chr5 57000238 57000261 -146085271 + AT_rich Low_complexity Low_complexity 1 23 0 2620 114 3 8 chr5 57001075 57001452 -146084080 - THE1C LTR MaLR 0 375 1 2000 150 0 3 chr5 57002535 57002835 -146082697 + AluSx SINE Alu 1 299 -13 409 278 148 24 chr5 57002862 57003153 -146082379 - MLT1L LTR MaLR -72 543 217 288 170 0 0 chr5 57003503 57003556 -146081976 + (TA)n Simple_repeat Simple_repeat 1 53 0 546 280 175 0 chr5 57004497 57004686 -146080846 + MIR SINE MIR 3 224 -38 385 204 38 0 chr5 57004696 57004828 -146080704 + (CTA)n Simple_repeat Simple_repeat 2 138 0 1683 279 45 63 chr5 57004926 57005622 -146079910 + L2 LINE L2 1944 2626 -688 619 269 24 63 chr5 57005643 57005792 -146079740 + MLT1H LTR MaLR 20 156 -393 2330 68 4 0 chr5 57005792 57006071 -146079461 + AluSp SINE Alu 25 304 -9 619 269 24 63 chr5 57006071 57006174 -146079358 + MLT1H LTR MaLR 156 262 -287 427 265 123 0 chr5 57006225 57006395 -146079137 + MLT1H LTR MaLR 359 549 0 1044 248 83 50 chr5 57006396 57006937 -146078595 + L2 LINE L2 2624 3184 -129 259 93 0 111 chr5 57006951 57007005 -146078527 - MLT2D LTR ERVL 0 464 417 317 229 0 21 chr5 57007006 57007102 -146078430 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 259 62 0 125 chr5 57007117 57007165 -146078367 + MLT2C1 LTR ERVL 350 391 -6 585 220 8 8 chr5 57007165 57007171 -146078361 + (TA)n Simple_repeat Simple_repeat 1 6 -283 222 37 0 0 chr5 57007171 57007198 -146078334 + (CA)n Simple_repeat Simple_repeat 2 28 0 585 220 8 8 chr5 57007198 57007454 -146078078 + (TA)n Simple_repeat Simple_repeat 5 289 0 2000 161 11 3 chr5 57007465 57007818 -146077714 - MLT2D LTR ERVL -58 356 1 356 319 95 0 chr5 57007822 57007938 -146077594 + L2 LINE L2 3186 3312 -1 2256 108 6 13 chr5 57009001 57009315 -146076217 + AluSx SINE Alu 1 312 0 1599 101 0 5 chr5 57010628 57010836 -146074696 + AluSq SINE Alu 1 207 -106 41404 44 4 1 chr5 57010995 57017162 -146068370 + L1PA3 LINE L1 1 6176 0 506 313 16 2 chr5 57017245 57017417 -146068115 - MIR3 SINE MIR -10 198 18 252 247 149 75 chr5 57018623 57018797 -146066735 + MIR SINE MIR 27 213 -49 210 150 0 0 chr5 57019459 57019499 -146066033 + (A)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr5 57019752 57019784 -146065748 + AT_rich Low_complexity Low_complexity 1 32 0 1995 132 53 31 chr5 57020997 57021353 -146064179 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr5 57023034 57023068 -146062464 + AT_rich Low_complexity Low_complexity 1 34 0 360 319 65 32 chr5 57023343 57023559 -146061973 - HERV16 LTR ERVL -1524 4240 4018 2793 314 80 39 chr5 57023610 57025113 -146060419 - HERV16 LTR ERVL -1567 3484 2044 1020 224 145 20 chr5 57025113 57025465 -146060067 + MSTD LTR MaLR 1 396 0 2793 314 80 39 chr5 57025465 57025638 -146059894 - HERV16 LTR ERVL -3007 2044 2103 2162 141 0 0 chr5 57025638 57025942 -146059590 - AluSx SINE Alu -8 304 1 2793 314 80 39 chr5 57025942 57026334 -146059198 - HERV16 LTR ERVL -2947 2104 1730 1093 293 84 3 chr5 57026640 57027032 -146058500 - HERV16 LTR ERVL -3735 1261 838 1176 294 36 15 chr5 57027129 57027541 -146057991 - LTR16A LTR ERVL -14 436 16 951 230 44 60 chr5 57028207 57028590 -146056942 - MER20B DNA MER1_type -23 760 384 4069 210 38 27 chr5 57028603 57028869 -146056663 + L1MB3 LINE L1 4222 4484 -1699 1446 193 42 39 chr5 57028869 57029180 -146056352 + AluJb SINE Alu 1 312 0 4069 210 38 27 chr5 57029180 57030169 -146055363 + L1MB3 LINE L1 4484 5509 -674 1870 128 13 30 chr5 57030169 57030473 -146055059 + AluSx SINE Alu 14 312 0 4069 210 38 27 chr5 57030473 57031156 -146054376 + L1MB3 LINE L1 5509 6183 0 2220 93 24 3 chr5 57031239 57031529 -146054003 + AluSg SINE Alu 1 296 -14 706 260 85 60 chr5 57031568 57031933 -146053599 - MER20B DNA MER1_type -409 374 1 1201 208 12 108 chr5 57031967 57032376 -146053156 - MLT1A2 LTR MaLR -4 370 1 1809 160 81 24 chr5 57032423 57032948 -146052584 - MLT2A2 LTR ERVL 0 554 1 2775 10 0 0 chr5 57033212 57033519 -146052013 - AluYa5 SINE Alu -4 307 1 192 317 17 17 chr5 57034935 57034995 -146050537 + L3 LINE CR1 1515 1574 -3 280 328 68 28 chr5 57035339 57035516 -146050016 - MIR3 SINE MIR -21 187 4 219 245 0 0 chr5 57035555 57035604 -146049928 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 373 318 114 15 chr5 57036976 57037177 -146048355 + MIR SINE MIR 23 243 -19 508 288 123 33 chr5 57037206 57037418 -146048114 + MIR SINE MIR 2 232 -30 21 36 0 0 chr5 57037457 57037485 -146048047 + AT_rich Low_complexity Low_complexity 1 28 0 570 312 63 5 chr5 57037582 57037771 -146047761 + MIR SINE MIR 5 204 -58 225 392 0 0 chr5 57041067 57041141 -146044391 + L2 LINE L2 3172 3245 -27 1958 134 30 7 chr5 57042165 57042194 -146043338 - AluSq SINE Alu -1 312 285 1256 39 17 17 chr5 57042194 57042374 -146043158 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 1958 134 30 7 chr5 57042374 57042649 -146042883 - AluSq SINE Alu -28 285 1 21 36 0 0 chr5 57042870 57042898 -146042634 + AT_rich Low_complexity Low_complexity 1 28 0 214 304 130 0 chr5 57043818 57043910 -146041622 + L2 LINE L2 2948 3051 -262 569 139 72 111 chr5 57043918 57044098 -146041434 + MLT1B LTR MaLR 1 173 -217 1390 201 51 17 chr5 57044101 57044394 -146041138 + AluJb SINE Alu 1 303 -9 393 149 0 0 chr5 57044401 57044468 -146041064 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 830 233 5 19 chr5 57044540 57044746 -146040786 + MLT1B LTR MaLR 184 386 -4 405 312 85 32 chr5 57044902 57045184 -146040348 - L2 LINE L2 -616 2698 2402 238 277 15 15 chr5 57045245 57045310 -146040222 - MER5A DNA MER1_type -1 188 124 374 235 13 54 chr5 57045318 57045467 -146040065 - L1M4 LINE L1 -1320 4826 4684 426 277 21 57 chr5 57045505 57045787 -146039745 + L1MCa LINE L1 1322 1593 -4833 571 231 0 0 chr5 57045788 57045896 -146039636 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3739 108 35 73 chr5 57045893 57046671 -146038861 + Tigger3(Golem) DNA MER2_type 2282 3029 0 1738 260 102 19 chr5 57046706 57047568 -146037964 + L1M4 LINE L1 3257 4258 -1888 255 207 58 46 chr5 57047571 57047639 -146037893 + MER69 DNA AcHobo 721 792 -1734 378 107 0 0 chr5 57047639 57047695 -146037837 + (TA)n Simple_repeat Simple_repeat 1 56 0 255 207 58 46 chr5 57047695 57047713 -146037819 + MER69 DNA AcHobo 792 808 -1718 * 518 207 35 35 chr5 57047697 57047842 -146037690 + MER69 DNA AcHobo 2017 2161 -365 447 261 97 0 chr5 57047873 57048007 -146037525 - MIR3 SINE MIR -1 207 61 764 81 6 167 chr5 57048026 57048200 -146037332 + Tigger3(Golem) DNA MER2_type 2762 2907 -122 408 259 0 0 chr5 57048546 57048631 -146036901 + L2 LINE L2 3185 3269 -3 2137 131 131 31 chr5 57050454 57050843 -146034689 + MSTA LTR MaLR 1 428 0 180 386 0 0 chr5 57050910 57050980 -146034552 - L2 LINE L2 0 3272 3203 22 56 0 0 chr5 57052012 57052048 -146033484 + AT_rich Low_complexity Low_complexity 1 36 0 615 296 150 45 chr5 57052106 57052613 -146032919 - MLT1K LTR MaLR -16 572 13 397 342 37 27 chr5 57053047 57053342 -146032190 + LTR16C LTR ERVL 194 491 0 180 125 0 0 chr5 57053782 57053814 -146031718 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 489 315 78 27 chr5 57054210 57054429 -146031103 - MIR SINE MIR -31 231 2 1593 115 127 4 chr5 57054564 57054816 -146030716 + AluSg1 SINE Alu 13 295 -14 186 43 0 0 chr5 57054950 57054973 -146030559 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 28310 111 22 63 chr5 57054973 57058818 -146026714 - L1PA7 LINE L1 -17 6137 2135 2880 19 0 0 chr5 57058818 57059136 -146026396 - AluYb8 SINE Alu 0 318 1 191 36 36 0 chr5 57059142 57059170 -146026362 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 28310 111 22 63 chr5 57059170 57061698 -146023834 - L1PA7 LINE L1 -4024 2130 33 1750 196 113 36 chr5 57062395 57062864 -146022668 + MLT1D LTR MaLR 1 505 0 337 264 140 60 chr5 57062864 57063046 -146022486 - MIR SINE MIR -60 202 9 249 327 110 46 chr5 57063082 57063363 -146022169 + L2 LINE L2 2970 3268 -4 567 237 29 7 chr5 57063486 57063625 -146021907 + MIR SINE MIR 100 241 -21 218 289 51 116 chr5 57064884 57065254 -146020278 - L2 LINE L2 -733 2581 2236 338 289 18 40 chr5 57065321 57065485 -146020047 - MIR SINE MIR -63 199 40 198 103 0 0 chr5 57065701 57065730 -146019802 + (A)n Simple_repeat Simple_repeat 1 29 0 290 176 44 0 chr5 57066627 57066695 -146018837 + MLT1J2 LTR MaLR 71 141 -309 502 313 15 0 chr5 57066911 57067042 -146018490 + MER91A DNA MER1_type 64 196 0 5505 79 19 7 chr5 57068438 57069195 -146016337 - MER4E LTR ERV1 0 766 1 216 0 0 0 chr5 57069474 57069498 -146016034 + (A)n Simple_repeat Simple_repeat 1 24 0 845 157 0 7 chr5 57070032 57070172 -146015360 - MER4E-int LTR ERV1 -106 6652 6514 252 323 0 0 chr5 57070203 57070262 -146015270 + LTR16B LTR ERVL 81 139 -325 2426 117 27 8 chr5 57070262 57070637 -146014895 + MER48 LTR ERV1 1 382 -5 25949 114 32 8 chr5 57070646 57073410 -146012122 + HERVH48 LTR ERV1 4 2914 -3740 2389 79 3 7 chr5 57073410 57073715 -146011817 + AluY SINE Alu 1 304 -7 25949 114 32 8 chr5 57073715 57075904 -146009628 + HERVH48 LTR ERV1 2914 5050 -1604 1160 181 118 25 chr5 57075904 57076142 -146009390 - AluJb SINE Alu -52 260 1 298 309 99 20 chr5 57076230 57076382 -146009150 + MIR3 SINE MIR 2 165 -43 4068 134 23 4 chr5 57077166 57077999 -146007533 - MER4E-int LTR ERV1 -244 6514 5626 2406 134 124 9 chr5 57078000 57078760 -146006772 - MER4E-int LTR ERV1 -1369 5389 4452 * 3671 160 40 3 chr5 57078759 57079389 -146006143 - MER4E-int LTR ERV1 -2670 4088 3436 11245 153 58 66 chr5 57079434 57082532 -146003000 - MER4E-int LTR ERV1 -3685 3073 1 5239 88 20 13 chr5 57082532 57083293 -146002239 - MER4E LTR ERV1 0 766 1 1744 160 11 28 chr5 57084099 57084282 -146001250 - AluSx SINE Alu 0 316 139 2104 129 7 0 chr5 57084282 57084577 -146000955 - AluSx SINE Alu -15 297 1 1744 160 11 28 chr5 57084577 57084714 -146000818 - AluSx SINE Alu -177 139 1 1576 153 110 26 chr5 57084985 57085331 -146000201 + THE1C LTR MaLR 1 375 0 567 345 28 2 chr5 57085401 57085784 -145999748 + LTR16A LTR ERVL 2 447 -3 185 135 108 27 chr5 57085947 57085984 -145999548 - L3 LINE CR1 -110 1467 1428 267 220 0 30 chr5 57086264 57086364 -145999168 + GA-rich Low_complexity Low_complexity 4 100 0 360 325 4 93 chr5 57086427 57086664 -145998868 - MER102a DNA MER1_type -1 329 114 1484 154 17 70 chr5 57087214 57087570 -145997962 - L1MB7 LINE L1 -19 6165 5829 1913 174 16 54 chr5 57087572 57088014 -145997518 - Tigger2a DNA MER2_type -1 433 9 892 149 144 0 chr5 57088021 57088209 -145997323 - L1MB7 LINE L1 -354 5830 5616 810 239 34 21 chr5 57088212 57088450 -145997082 - LTR12 LTR ERV1 -236 478 238 1163 268 55 40 chr5 57088619 57089190 -145996342 - HERV17 LTR ERV1 0 8626 6967 17745 229 13 2 chr5 57090514 57094137 -145991395 - HERV17 LTR ERV1 -1912 6345 2682 20641 55 1 1 chr5 57094145 57100221 -145985311 - L1PA4 LINE L1 -3 6152 1 6330 262 12 6 chr5 57100221 57101842 -145983690 - HERV17 LTR ERV1 -5341 3285 1655 294 245 59 39 chr5 57101919 57102021 -145983511 - HERV17 LTR ERV1 -7271 986 883 1583 262 12 28 chr5 57102310 57102838 -145982694 - HERV17 LTR ERV1 -7699 558 18 836 212 88 22 chr5 57102858 57103084 -145982448 - LTR12 LTR ERV1 -236 478 238 1781 116 17 55 chr5 57103251 57103404 -145982128 - L1M4 LINE L1 -565 5619 5462 1720 180 34 0 chr5 57103404 57103698 -145981834 - AluJo SINE Alu -8 304 1 1781 116 17 55 chr5 57103698 57103890 -145981642 - L1M4 LINE L1 -722 5462 5287 261 0 0 0 chr5 57104802 57104831 -145980701 + (TA)n Simple_repeat Simple_repeat 1 29 0 300 83 0 0 chr5 57104831 57104879 -145980653 + (GA)n Simple_repeat Simple_repeat 1 48 0 2125 127 0 0 chr5 57104879 57105162 -145980370 - AluSq SINE Alu -30 283 1 252 0 0 0 chr5 57106953 57106981 -145978551 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 816 269 35 23 chr5 57108249 57108506 -145977026 + MIR SINE MIR 3 262 0 2325 96 0 7 chr5 57108537 57108839 -145976693 - AluY SINE Alu -11 300 1 525 258 77 26 chr5 57108860 57109093 -145976439 - L1ME LINE L1 -364 5757 5513 22 35 0 0 chr5 57109095 57109124 -145976408 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 57109163 57109198 -145976334 + AT_rich Low_complexity Low_complexity 1 35 0 260 283 0 0 chr5 57109205 57109258 -145976274 + L2 LINE L2 3191 3243 -29 213 175 0 0 chr5 57109288 57109328 -145976204 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 339 96 0 0 chr5 57111809 57111861 -145973671 + (TG)n Simple_repeat Simple_repeat 2 53 0 356 197 26 0 chr5 57112148 57112224 -145973308 + MER116 DNA Mariner 3 80 0 487 292 124 16 chr5 57112242 57112427 -145973105 + MIR SINE MIR 2 206 -56 32 26 0 0 chr5 57112427 57112466 -145973066 + AT_rich Low_complexity Low_complexity 1 39 0 247 197 76 0 chr5 57113138 57113204 -145972328 - MLT1K LTR MaLR -4 584 514 21 36 0 0 chr5 57114610 57114638 -145970894 + AT_rich Low_complexity Low_complexity 1 28 0 217 138 17 35 chr5 57114695 57114753 -145970779 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1434 97 51 5 chr5 57115216 57115432 -145970100 - L1PA8 LINE L1 -9 6163 5938 649 231 0 15 chr5 57115618 57115748 -145969784 - FLAM_A SINE Alu -5 128 1 237 354 41 32 chr5 57117649 57117831 -145967701 + MIR3 SINE MIR 15 197 -65 497 263 191 36 chr5 57117851 57118186 -145967346 - MLT1J2 LTR MaLR -7 443 57 1587 153 41 6 chr5 57118636 57118950 -145966582 - MER45B DNA AcHobo -1 1039 715 453 246 79 0 chr5 57119203 57119329 -145966203 - MER45C DNA AcHobo -335 618 483 494 264 95 7 chr5 57119450 57119598 -145965934 - MER45C DNA AcHobo -790 163 3 201 253 92 58 chr5 57120288 57120375 -145965157 + MIR SINE MIR 42 131 -77 27 29 0 0 chr5 57120444 57120478 -145965054 + AT_rich Low_complexity Low_complexity 1 34 0 481 186 31 0 chr5 57120790 57120887 -145964645 - Tigger3b DNA MER2_type -3 1238 1139 4408 97 37 30 chr5 57120902 57121083 -145964449 - Tigger3b DNA MER2_type -2262 766 588 180 0 0 0 chr5 57121083 57121103 -145964429 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4408 97 37 30 chr5 57121103 57121395 -145964137 - Tigger3b DNA MER2_type -2440 588 299 2141 124 0 3 chr5 57121395 57121693 -145963839 + AluSx SINE Alu 1 297 -15 4408 97 37 30 chr5 57121693 57121978 -145963554 - Tigger3b DNA MER2_type -2729 299 2 215 270 16 16 chr5 57122184 57122247 -145963285 + MIR SINE MIR 170 232 -30 1179 201 66 58 chr5 57122838 57123201 -145962331 - MLT1A2 LTR MaLR -8 366 1 258 220 0 0 chr5 57124323 57124382 -145961150 + T-rich Low_complexity Low_complexity 1 59 0 342 0 0 0 chr5 57124977 57125015 -145960517 + (CA)n Simple_repeat Simple_repeat 2 39 0 950 190 23 0 chr5 57125455 57125629 -145959903 - MER45A DNA AcHobo 0 178 1 235 297 69 40 chr5 57125633 57125734 -145959798 + L2 LINE L2 3168 3271 -1 4139 157 23 7 chr5 57128071 57128804 -145956728 + L1PB4 LINE L1 5409 6153 -3 21 0 0 0 chr5 57128806 57128827 -145956705 + AT_rich Low_complexity Low_complexity 1 21 0 369 192 25 0 chr5 57128832 57128952 -145956580 + (TA)n Simple_repeat Simple_repeat 2 124 0 268 321 73 0 chr5 57129068 57129177 -145956355 - LTR16A1 LTR ERVL -2 455 339 624 282 146 10 chr5 57129260 57129561 -145955971 - LTR16A1 LTR ERVL -115 342 1 732 343 62 25 chr5 57129746 57130394 -145955138 - HERV16 LTR ERVL -439 5325 4654 2549 336 67 32 chr5 57130442 57133304 -145952228 - HERV16 LTR ERVL -1180 4584 1606 668 298 17 4 chr5 57133444 57133679 -145951853 - HERV16 LTR ERVL -3667 1329 1092 342 248 0 88 chr5 57133698 57133811 -145951721 + MER58A DNA MER1_type 7 109 0 * 362 200 0 0 chr5 57133811 57133870 -145951662 + MER58A DNA MER1_type 161 219 -5 1225 344 80 21 chr5 57133883 57134908 -145950624 - HERV16 LTR ERVL -3909 1087 3 753 289 114 27 chr5 57134912 57135317 -145950215 - LTR16A1 LTR ERVL -17 440 1 200 33 0 33 chr5 57135819 57135849 -145949683 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2153 106 0 70 chr5 57137166 57137497 -145948035 + AluSq SINE Alu 1 308 -5 313 232 0 0 chr5 57137840 57137896 -145947636 + MER5A DNA MER1_type 16 71 -118 41892 46 1 1 chr5 57137903 57144059 -145941473 + L1PA3 LINE L1 3 6152 -3 215 0 0 62 chr5 57144062 57144094 -145941438 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 193 240 42 52 chr5 57144265 57144361 -145941171 - L3 LINE CR1 -579 998 904 283 96 96 0 chr5 57144767 57144819 -145940713 + MER63 DNA MER1_type 1 57 -873 2371 190 57 11 chr5 57144826 57145368 -145940164 + MER63 DNA MER1_type 471 1037 -24 614 234 0 0 chr5 57146058 57146186 -145939346 + MER3 DNA MER1_type 1 128 -81 209 56 0 28 chr5 57146188 57146224 -145939308 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 4758 261 113 40 chr5 57149207 57149597 -145935935 - L1MEc LINE L1 -437 6009 5649 9457 34 0 2 chr5 57149597 57151512 -145934020 - L1PA2 LINE L1 -1 6154 4242 4758 261 113 40 chr5 57151512 57154903 -145930629 - L1MEc LINE L1 -797 5649 1832 429 284 111 35 chr5 57154962 57155321 -145930211 - L1MEc LINE L1 -4835 1680 1367 816 96 9 0 chr5 57155393 57155508 -145930024 - THE1B LTR MaLR 0 364 249 11208 89 12 0 chr5 57155533 57157089 -145928443 - THE1B-int LTR MaLR 0 1580 6 2120 136 25 35 chr5 57157113 57157481 -145928051 - THE1B LTR MaLR 0 364 1 577 292 15 29 chr5 57157563 57157905 -145927627 - L1MEc LINE L1 -5484 1123 787 1931 130 0 7 chr5 57157908 57158230 -145927302 - AluSx SINE Alu 0 320 1 1097 333 34 26 chr5 57158245 57158860 -145926672 - HERV16 LTR ERVL -4340 656 37 339 304 145 43 chr5 57158918 57159194 -145926338 - LTR16A LTR ERVL -34 416 113 243 264 121 0 chr5 57159407 57159498 -145926034 + LTR50 LTR ERVL 1 102 -693 238 283 101 10 chr5 57159588 57159629 -145925903 + LTR50 LTR ERVL 503 539 -256 2227 128 3 0 chr5 57159629 57159933 -145925599 - AluSx SINE Alu -7 305 1 238 283 101 10 chr5 57159933 57159990 -145925542 + LTR50 LTR ERVL 539 610 -185 4542 146 28 37 chr5 57159990 57160824 -145924708 + LTR1B LTR ERV1 1 826 0 331 289 141 7 chr5 57162502 57162644 -145922888 - MLT1H LTR MaLR -7 542 382 278 275 25 12 chr5 57163007 57163087 -145922445 + L2 LINE L2 3188 3268 -4 224 371 34 65 chr5 57163617 57163896 -145921636 + L2 LINE L2 2958 3311 -2 192 291 47 0 chr5 57164252 57164338 -145921194 - MIR SINE MIR -13 249 160 695 226 70 0 chr5 57164951 57165150 -145920382 - MER45B DNA AcHobo 0 1040 828 2069 227 92 87 chr5 57165154 57165434 -145920098 - Charlie2a DNA MER1_type -851 2011 1734 1421 188 79 20 chr5 57165434 57165726 -145919806 - AluJb SINE Alu 0 312 4 2069 227 92 87 chr5 57165726 57166797 -145918735 - Charlie2a DNA MER1_type -1128 1734 654 408 281 22 37 chr5 57166801 57166843 -145918689 + L2 LINE L2 3180 3221 -92 2120 142 0 0 chr5 57166843 57167154 -145918378 - AluSx SINE Alu -1 311 1 408 281 22 37 chr5 57167154 57167246 -145918286 + L2 LINE L2 3221 3312 -1 32 26 0 0 chr5 57167319 57167358 -145918174 + AT_rich Low_complexity Low_complexity 1 39 0 435 294 10 50 chr5 57167404 57167657 -145917875 - L1ME LINE L1 -605 5561 5314 5316 85 3 12 chr5 57168223 57168978 -145916554 - L1PA13 LINE L1 -4 6159 5412 299 311 80 23 chr5 57169190 57169729 -145915803 + L1M4 LINE L1 2157 2735 -3411 25 0 0 0 chr5 57169792 57169817 -145915715 + AT_rich Low_complexity Low_complexity 1 25 0 461 215 58 58 chr5 57170958 57171130 -145914402 - MLT1C LTR MaLR -5 462 291 1639 222 54 22 chr5 57171194 57171640 -145913892 - MLT1C LTR MaLR -7 460 1 227 207 52 17 chr5 57173443 57173501 -145912031 - L2 LINE L2 -2 3311 3252 180 111 0 0 chr5 57173517 57173544 -145911988 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 1352 223 72 19 chr5 57173552 57173928 -145911604 + MSTD LTR MaLR 1 396 0 414 0 0 0 chr5 57173954 57174000 -145911532 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 304 328 34 17 chr5 57174499 57174618 -145910914 + L2 LINE L2 3188 3308 -5 244 308 159 0 chr5 57174767 57174874 -145910658 - L2 LINE L2 0 3272 3149 743 189 26 0 chr5 57174934 57175087 -145910445 + MER33 DNA MER1_type 3 159 -165 25483 81 16 9 chr5 57175089 57179668 -145905864 - L1PA7 LINE L1 -11 6143 1548 469 112 5 214 chr5 57179670 57179885 -145905647 + MER33 DNA MER1_type 191 360 -3 196 344 42 21 chr5 57180667 57180763 -145904769 - MIR SINE MIR -15 247 150 586 322 72 13 chr5 57180993 57181229 -145904303 - MIR SINE MIR -11 251 2 365 297 119 0 chr5 57182420 57182538 -145902994 - MIR SINE MIR -14 248 117 2482 233 59 25 chr5 57185143 57185920 -145899612 + L1MEc LINE L1 1556 2365 -3850 1797 176 0 7 chr5 57185920 57186215 -145899317 + AluSx SINE Alu 1 293 -19 2482 233 59 25 chr5 57186215 57186519 -145899013 + L1MEc LINE L1 2365 2657 -3558 260 343 0 0 chr5 57186628 57186698 -145898834 - MER91B DNA MER1_type -118 72 3 369 0 0 0 chr5 57186809 57186850 -145898682 + (CA)n Simple_repeat Simple_repeat 2 42 0 327 263 12 0 chr5 57187049 57187129 -145898403 + LTR16A LTR ERVL 364 444 -6 28 0 0 0 chr5 57187601 57187629 -145897903 + AT_rich Low_complexity Low_complexity 1 28 0 435 336 50 25 chr5 57187629 57187867 -145897665 - L2 LINE L2 -1370 1944 1701 2628 189 102 12 chr5 57188055 57188702 -145896830 - MER39 LTR ERV1 0 707 3 491 309 62 16 chr5 57188929 57189123 -145896409 + MIR SINE MIR 46 248 -14 619 255 48 38 chr5 57190608 57190922 -145894610 - L1MC4 LINE L1 -108 7934 7618 23 0 0 0 chr5 57191523 57191546 -145893986 + AT_rich Low_complexity Low_complexity 1 23 0 450 316 25 13 chr5 57191766 57191924 -145893608 - MIR3 SINE MIR -10 198 39 399 329 84 7 chr5 57192872 57193027 -145892505 + MIR SINE MIR 28 194 -68 226 344 42 21 chr5 57194043 57194139 -145891393 + MIR SINE MIR 31 128 -80 438 278 52 9 chr5 57194868 57194983 -145890549 - L2 LINE L2 -4 3268 3149 189 356 25 50 chr5 57195006 57195166 -145890366 + MER5A DNA MER1_type 34 189 0 307 323 57 60 chr5 57197709 57198201 -145887331 + L2 LINE L2 2481 3036 -236 429 298 65 0 chr5 57198331 57198455 -145887077 - L2 LINE L2 -4 3268 3137 278 368 78 12 chr5 57198479 57198645 -145886887 + L2 LINE L2 3094 3270 -2 718 325 95 0 chr5 57198722 57199017 -145886515 - L3 LINE CR1 -75 1502 1180 193 294 103 0 chr5 57201371 57201439 -145884093 + L3 LINE CR1 1503 1577 0 189 74 0 0 chr5 57201798 57201825 -145883707 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 609 313 77 17 chr5 57205134 57205537 -145879995 + LTR16A LTR ERVL 18 444 -6 1162 208 0 0 chr5 57205677 57205898 -145879634 + MLT1A1 LTR MaLR 145 365 0 1469 178 57 23 chr5 57205927 57206276 -145879256 - L1PA16 LINE L1 0 6166 5806 2452 205 98 10 chr5 57206277 57206891 -145878641 - MER45B DNA AcHobo -310 730 63 806 280 45 73 chr5 57206931 57207399 -145878133 + HERV16 LTR ERVL 165 619 -4377 756 229 33 56 chr5 57207400 57207614 -145877918 - MER58A DNA MER1_type -3 221 13 213 65 0 0 chr5 57207818 57207849 -145877683 + (A)n Simple_repeat Simple_repeat 1 31 0 241 336 39 19 chr5 57208245 57208349 -145877183 - L2 LINE L2 -40 3273 3168 435 282 77 95 chr5 57208560 57209053 -145876479 + MLT1J LTR MaLR 26 509 -2 539 291 23 11 chr5 57210705 57210880 -145874652 + MIR SINE MIR 44 220 -42 623 273 39 23 chr5 57211547 57211954 -145873578 + LTR16A LTR ERVL 1 444 -6 214 281 110 37 chr5 57212632 57212661 -145872871 - MIR3 SINE MIR -62 146 121 2363 113 11 8 chr5 57212661 57213015 -145872517 + THE1A LTR MaLR 1 355 0 214 281 110 37 chr5 57213015 57213155 -145872377 - MIR3 SINE MIR -87 121 5 3384 71 32 0 chr5 57214127 57214565 -145870967 + MLT2A2 LTR ERVL 1 452 -1 658 214 57 25 chr5 57215122 57215281 -145870251 - MIR SINE MIR -14 248 85 1243 157 89 40 chr5 57215327 57215455 -145870077 + AluJo SINE Alu 1 121 -191 189 0 0 0 chr5 57215455 57215476 -145870056 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1243 157 89 40 chr5 57215476 57215595 -145869937 + AluJo SINE Alu 121 260 -52 296 303 83 0 chr5 57215939 57216071 -145869461 - MLT1L LTR MaLR 0 615 473 2203 103 6 26 chr5 57216352 57216664 -145868868 + AluSg SINE Alu 1 306 -4 813 298 60 45 chr5 57217229 57217759 -145867773 + MLT1H LTR MaLR 12 549 0 223 309 0 37 chr5 57217951 57218032 -145867500 + GA-rich Low_complexity Low_complexity 3 80 0 352 295 48 48 chr5 57218988 57219154 -145866378 - MER5B DNA MER1_type 0 178 13 198 361 35 35 chr5 57219673 57219817 -145865715 - L3 LINE CR1 -15 1562 1419 424 219 63 107 chr5 57221386 57221656 -145863876 + LTR16A1 LTR ERVL 199 456 -1 212 284 24 94 chr5 57221756 57221784 -145863748 - MIR SINE MIR -142 120 92 1846 143 60 30 chr5 57221784 57222148 -145863384 - THE1C LTR MaLR 0 375 1 212 284 24 94 chr5 57222148 57222246 -145863286 - MIR SINE MIR -170 92 3 1860 171 14 20 chr5 57223069 57223425 -145862107 - MLT1A1 LTR MaLR -2 363 10 638 239 66 36 chr5 57223543 57223773 -145861759 + MIR SINE MIR 25 258 -4 2268 118 0 3 chr5 57224051 57224357 -145861175 - AluSq SINE Alu -8 305 1 299 271 47 0 chr5 57224491 57224576 -145860956 - L2 LINE L2 0 3272 3184 1774 220 54 22 chr5 57226640 57227086 -145858446 + MLT1C LTR MaLR 1 460 -7 507 209 58 58 chr5 57227150 57227322 -145858210 + MLT1C LTR MaLR 291 462 -5 25 0 0 0 chr5 57228463 57228488 -145857044 + AT_rich Low_complexity Low_complexity 1 25 0 401 311 80 23 chr5 57228551 57229090 -145856442 - L1M4 LINE L1 -3411 2735 2157 5328 85 3 12 chr5 57229302 57230057 -145855475 + L1PA13 LINE L1 5412 6159 -4 476 269 55 51 chr5 57230640 57230893 -145854639 + L1ME LINE L1 5332 5561 -605 32 26 0 0 chr5 57230922 57230961 -145854571 + AT_rich Low_complexity Low_complexity 1 39 0 411 281 22 37 chr5 57231034 57231126 -145854406 - L2 LINE L2 -1 3312 3221 2092 142 0 0 chr5 57231126 57231437 -145854095 + AluSx SINE Alu 1 311 -1 411 281 22 37 chr5 57231437 57231479 -145854053 - L2 LINE L2 -92 3221 3180 2439 228 91 87 chr5 57231483 57232554 -145852978 + Charlie2a DNA MER1_type 654 1734 -1128 1387 188 79 20 chr5 57232554 57232846 -145852686 + AluJb SINE Alu 4 312 0 2439 228 91 87 chr5 57232846 57233126 -145852406 + Charlie2a DNA MER1_type 1734 2011 -851 754 226 70 0 chr5 57233130 57233329 -145852203 + MER45B DNA AcHobo 828 1040 0 191 291 47 0 chr5 57233942 57234028 -145851504 + MIR SINE MIR 160 249 -13 226 371 34 65 chr5 57234384 57234663 -145850869 - L2 LINE L2 -2 3311 2958 277 275 25 12 chr5 57235192 57235272 -145850260 - L2 LINE L2 -4 3268 3188 372 279 128 10 chr5 57235591 57235777 -145849755 + MLT1H LTR MaLR 336 542 -7 4474 150 28 37 chr5 57237455 57238289 -145847243 - LTR1B LTR ERV1 0 826 1 271 283 101 10 chr5 57238289 57238346 -145847186 - LTR50 LTR ERVL -185 610 560 2192 128 3 0 chr5 57238346 57238650 -145846882 + AluSx SINE Alu 1 305 -7 271 283 101 10 chr5 57238650 57238691 -145846841 - LTR50 LTR ERVL -235 560 503 276 202 119 92 chr5 57238763 57238872 -145846660 - LTR50 LTR ERVL -683 112 1 604 310 86 43 chr5 57239031 57239378 -145846154 + LTR16A LTR ERVL 58 416 -34 1269 333 32 24 chr5 57239436 57240051 -145845481 + HERV16 LTR ERVL 37 656 -4340 1935 130 0 7 chr5 57240066 57240388 -145845144 + AluSx SINE Alu 1 320 0 621 278 104 28 chr5 57240391 57240815 -145844717 + L1MEc LINE L1 787 1242 -5365 2092 139 25 35 chr5 57240815 57241183 -145844349 + THE1B LTR MaLR 1 364 0 11805 88 12 0 chr5 57241207 57242758 -145842774 + THE1B-int LTR MaLR 6 1574 -6 859 111 22 1 chr5 57242759 57242903 -145842629 + THE1B LTR MaLR 222 364 0 429 284 111 35 chr5 57242975 57243334 -145842198 + L1MEc LINE L1 1367 1591 -4835 5183 261 111 35 chr5 57243393 57246783 -145838749 + L1MEc LINE L1 1832 5629 -797 9424 34 0 0 chr5 57246785 57248695 -145836837 + L1PA3 LINE L1 4242 6152 -3 215 0 0 62 chr5 57248698 57248730 -145836802 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 199 240 42 52 chr5 57248901 57248997 -145836535 - L3 LINE CR1 -579 998 904 300 73 55 36 chr5 57249401 57249456 -145836076 + MER63 DNA MER1_type 2 57 -1004 2431 185 64 18 chr5 57249463 57250010 -145835522 + MER63 DNA MER1_type 471 1042 -19 657 234 0 0 chr5 57250689 57250817 -145834715 + MER3 DNA MER1_type 1 128 -81 209 56 0 28 chr5 57250819 57250855 -145834677 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 1574 214 42 11 chr5 57253838 57254216 -145831316 - L1ME LINE L1 -437 5729 5340 7742 23 0 0 chr5 57254228 57255230 -145830302 - L1PA2 LINE L1 -1 6154 5153 277 250 0 37 chr5 57255388 57255496 -145830036 + A-rich Low_complexity Low_complexity 1 104 0 233 29 29 0 chr5 57255705 57255739 -145829793 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7334 39 0 0 chr5 57255739 57256619 -145828913 - L1PA3 LINE L1 -13 6142 5263 306 91 0 0 chr5 57306619 57306663 -145778869 + MER58 DNA MER1_type 2373 2416 -4 25 51 0 0 chr5 57307298 57307337 -145778195 + AT_rich Low_complexity Low_complexity 1 39 0 2090 195 88 29 chr5 57308387 57308899 -145776633 - MLT1F LTR MaLR 0 542 1 313 265 219 27 chr5 57309703 57309922 -145775610 - MIR SINE MIR 0 262 2 894 233 5 21 chr5 57310882 57311071 -145774461 - MER5A DNA MER1_type -3 186 1 286 368 136 0 chr5 57312845 57313000 -145772532 - MIR3 SINE MIR -30 178 3 1064 162 39 15 chr5 57313304 57313508 -145772024 + MER20 DNA MER1_type 3 211 -8 235 267 0 0 chr5 57313607 57313652 -145771880 - L2 LINE L2 -19 3294 3250 189 107 0 0 chr5 57314601 57314629 -145770903 + (A)n Simple_repeat Simple_repeat 1 28 0 204 343 71 20 chr5 57316105 57316204 -145769328 + L2 LINE L2 3168 3271 -1 390 237 189 11 chr5 57316218 57316436 -145769096 + L1ME4a LINE L1 5274 5532 -710 517 268 80 7 chr5 57316449 57316751 -145768781 + L1ME4a LINE L1 5573 5896 -225 243 314 0 12 chr5 57317859 57317945 -145767587 - Tigger6 DNA MER2_type -1511 86 2 403 340 142 31 chr5 57318139 57318563 -145766969 - L2 LINE L2 -645 2669 2199 3591 152 33 23 chr5 57318614 57319258 -145766274 + MER39B LTR ERV1 4 653 0 306 280 47 19 chr5 57319565 57319672 -145765860 + MER46C DNA MER2_type 4 113 -225 254 91 0 0 chr5 57319670 57319703 -145765829 + MER46C DNA MER2_type 79 111 -227 * 2215 123 0 0 chr5 57319903 57320211 -145765321 - AluSx SINE Alu -4 308 1 292 210 198 0 chr5 57320922 57321003 -145764529 - L2 LINE L2 0 3313 3217 247 211 0 0 chr5 57322162 57322214 -145763318 + A-rich Low_complexity Low_complexity 1 52 0 924 143 98 30 chr5 57322532 57322735 -145762797 - MER20 DNA MER1_type -2 217 1 454 211 263 31 chr5 57322755 57322949 -145762583 + MIR SINE MIR 7 245 -17 234 382 13 0 chr5 57323095 57323171 -145762361 + MIR SINE MIR 34 110 -152 417 323 0 85 chr5 57323349 57323471 -145762061 - MER5B DNA MER1_type -3 175 44 243 0 0 0 chr5 57323471 57323498 -145762034 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2158 121 0 0 chr5 57323500 57323781 -145761751 - AluSx SINE Alu -30 282 2 417 323 0 85 chr5 57323781 57323798 -145761734 - MER5B DNA MER1_type -135 43 26 215 91 0 23 chr5 57323798 57323842 -145761690 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 417 323 0 85 chr5 57323842 57323887 -145761645 - MER5B DNA MER1_type -152 26 3 569 303 84 0 chr5 57324415 57324653 -145760879 + MARNA DNA Mariner 278 535 -51 740 183 39 44 chr5 57324751 57324931 -145760601 + MER20 DNA MER1_type 35 213 -6 770 310 18 22 chr5 57325152 57325381 -145760151 + MIR SINE MIR 1 228 -34 776 228 11 54 chr5 57325494 57325678 -145759854 + MER5B DNA MER1_type 1 176 -2 1935 149 19 10 chr5 57326505 57326813 -145758719 - AluJb SINE Alu -1 311 1 23 0 0 0 chr5 57327968 57327991 -145757541 + AT_rich Low_complexity Low_complexity 1 23 0 366 91 0 0 chr5 57329115 57329170 -145756362 + (CA)n Simple_repeat Simple_repeat 2 56 0 458 205 17 60 chr5 57329523 57329640 -145755892 + L1PA16 LINE L1 6032 6143 -23 1309 201 10 97 chr5 57329760 57329949 -145755583 + L1MA10 LINE L1 5959 6096 -238 2192 103 0 3 chr5 57329949 57330241 -145755291 - AluSc SINE Alu -16 293 3 1309 201 10 97 chr5 57330241 57330455 -145755077 + L1MA10 LINE L1 6096 6327 -7 366 123 0 0 chr5 57331819 57331876 -145753656 + (TC)n Simple_repeat Simple_repeat 2 58 0 2200 99 3 0 chr5 57331976 57332289 -145753243 - AluSp SINE Alu 0 314 1 1513 156 27 16 chr5 57332412 57332669 -145752863 - AluJo SINE Alu -52 260 1 333 218 0 13 chr5 57333218 57333296 -145752236 + MER116 DNA Mariner 1 77 -3 586 74 0 0 chr5 57335393 57335474 -145750058 + AluSc SINE Alu 1 81 -228 428 95 119 24 chr5 57335507 57335591 -145749941 + AluSg/x SINE Alu 204 295 -14 212 59 29 0 chr5 57336159 57336193 -145749339 + (TTG)n Simple_repeat Simple_repeat 1 35 0 195 296 0 0 chr5 57337136 57337190 -145748342 + L2 LINE L2 2220 2273 -1041 532 269 110 14 chr5 57337315 57337534 -145747998 + L2 LINE L2 3073 3312 -1 190 326 21 21 chr5 57337585 57337680 -145747852 + L2 LINE L2 2440 2534 -780 1920 141 0 67 chr5 57337740 57338067 -145747465 + AluJo SINE Alu 1 305 -7 214 296 49 12 chr5 57339822 57339903 -145745629 + MIR SINE MIR 157 240 -22 184 273 0 0 chr5 57339875 57339919 -145745613 + L2 LINE L2 3217 3260 -12 * 241 247 247 0 chr5 57339984 57340073 -145745459 - L2 LINE L2 0 3272 3162 211 114 29 0 chr5 57340078 57340113 -145745419 + L2 LINE L2 3270 3305 -8 265 338 35 28 chr5 57340739 57340884 -145744648 - L2 LINE L2 -7 3306 3161 291 279 89 13 chr5 57341216 57341295 -145744237 + L2 LINE L2 3226 3310 -3 313 346 89 41 chr5 57341372 57341664 -145743868 - L2 LINE L2 -567 2747 2442 260 350 138 24 chr5 57341823 57341946 -145743586 - L2 LINE L2 0 3272 3136 346 296 45 57 chr5 57341960 57342136 -145743396 - L2 LINE L2 -479 2835 2662 201 213 21 0 chr5 57342611 57342658 -145742874 - MIR SINE MIR -123 139 92 279 313 54 0 chr5 57344507 57344619 -145740913 - MIR SINE MIR 0 262 145 213 258 189 30 chr5 57345628 57345760 -145739772 - MER5B DNA MER1_type 0 178 26 233 220 55 11 chr5 57346055 57346146 -145739386 + L1ME4a LINE L1 5804 5898 -223 2068 132 0 7 chr5 57346535 57346890 -145738642 - AluSx SINE Alu 0 312 7 4960 97 12 13 chr5 57347312 57348004 -145737528 + LTR8 LTR ERV1 1 691 0 208 304 78 29 chr5 57348621 57348723 -145736809 - L2 LINE L2 0 3313 3207 381 269 207 0 chr5 57349216 57349361 -145736171 + MIR SINE MIR 14 188 -74 1338 151 50 37 chr5 57349367 57349563 -145735969 + L1MC3 LINE L1 7475 7678 -107 2216 120 0 0 chr5 57349563 57349863 -145735669 - AluSx SINE Alu -12 300 1 1338 151 50 37 chr5 57349863 57349965 -145735567 + L1MC3 LINE L1 7678 7777 -8 212 270 32 0 chr5 57349996 57350059 -145735473 + MIR SINE MIR 184 248 -14 30 59 0 0 chr5 57351544 57351595 -145733937 + AT_rich Low_complexity Low_complexity 1 51 0 180 167 0 28 chr5 57354047 57354083 -145731449 - L2 LINE L2 -16 3297 3263 469 233 73 13 chr5 57354912 57355062 -145730470 + L1ME4a LINE L1 5963 6121 0 30 27 0 0 chr5 57355385 57355422 -145730110 + AT_rich Low_complexity Low_complexity 1 37 0 2274 101 17 0 chr5 57355465 57355762 -145729770 + AluSg1 SINE Alu 1 302 -7 3743 165 10 42 chr5 57356162 57356890 -145728642 + L1MB7 LINE L1 5428 6132 -52 1758 152 10 14 chr5 57356890 57357179 -145728353 + AluJb SINE Alu 5 292 -20 3743 165 10 42 chr5 57357179 57357220 -145728312 + L1MB7 LINE L1 6132 6173 -11 2167 123 0 3 chr5 57357226 57357528 -145728004 - AluSq SINE Alu -12 301 1 857 281 86 39 chr5 57357552 57357958 -145727574 + L1MC4a LINE L1 6560 6984 -824 436 287 138 29 chr5 57358152 57358326 -145727206 - L2 LINE L2 -285 3028 2836 241 274 57 76 chr5 57358735 57358892 -145726640 - LTR16C LTR ERVL -13 478 325 373 337 95 8 chr5 57359086 57359338 -145726194 - L1MC4a LINE L1 -395 7413 7140 2231 110 7 0 chr5 57359562 57359854 -145725678 - AluSq SINE Alu -18 295 2 533 335 10 0 chr5 57360199 57360396 -145725136 + L2 LINE L2 2375 2573 -741 316 322 96 28 chr5 57360453 57360761 -145724771 + L2 LINE L2 2719 3054 -218 1332 227 60 3 chr5 57362715 57363098 -145722434 + L1M4 LINE L1 4475 4879 -1267 765 165 25 19 chr5 57363144 57363302 -145722230 - MLT1A1 LTR MaLR 0 365 207 3122 130 50 4 chr5 57363390 57363875 -145721657 + MER84 LTR ERV1 1 507 0 225 0 0 0 chr5 57364684 57364709 -145720823 + (TA)n Simple_repeat Simple_repeat 1 25 0 415 317 6 27 chr5 57367201 57367384 -145718148 + GA-rich Low_complexity Low_complexity 2 180 0 219 230 0 80 chr5 57367804 57367904 -145717628 + G-rich Low_complexity Low_complexity 3 94 0 234 176 0 0 chr5 57368829 57368880 -145716652 + (CA)n Simple_repeat Simple_repeat 1 51 0 22 56 0 0 chr5 57368886 57368922 -145716610 + GC_rich Low_complexity Low_complexity 1 36 0 25 51 0 0 chr5 57369381 57369420 -145716112 + GC_rich Low_complexity Low_complexity 1 39 0 23 78 0 0 chr5 57369452 57369503 -145716029 + GC_rich Low_complexity Low_complexity 1 51 0 200 97 32 0 chr5 57370013 57370044 -145715488 + A-rich Low_complexity Low_complexity 4 35 0 216 0 0 0 chr5 57370204 57370228 -145715304 + (A)n Simple_repeat Simple_repeat 1 24 0 646 118 22 22 chr5 57370956 57371092 -145714440 + CT-rich Low_complexity Low_complexity 1 136 0 186 43 0 0 chr5 57371363 57371386 -145714146 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 211 339 17 17 chr5 57371415 57371530 -145714002 + C-rich Low_complexity Low_complexity 3 117 0 25 31 0 0 chr5 57373629 57373661 -145711871 + AT_rich Low_complexity Low_complexity 1 32 0 306 73 0 0 chr5 57374814 57374855 -145710677 + (A)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr5 57375742 57375770 -145709762 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 57375847 57375870 -145709662 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 57377417 57377440 -145708092 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 57377675 57377697 -145707835 + AT_rich Low_complexity Low_complexity 1 22 0 896 223 29 108 chr5 57377806 57378251 -145707281 + L1MC4 LINE L1 7633 8042 0 534 330 6 0 chr5 57378560 57378739 -145706793 + MIR SINE MIR 70 249 -13 772 257 16 11 chr5 57380354 57380541 -145704991 + MER5A DNA MER1_type 1 188 -1 208 91 45 0 chr5 57381478 57381522 -145704010 + (TA)n Simple_repeat Simple_repeat 1 46 0 366 128 32 0 chr5 57381554 57381648 -145703884 + (TA)n Simple_repeat Simple_repeat 1 97 0 301 165 55 8 chr5 57382072 57382199 -145703333 + (TA)n Simple_repeat Simple_repeat 2 134 0 1947 162 3 19 chr5 57382241 57382447 -145703085 + AluJb SINE Alu 3 204 -108 2031 222 32 56 chr5 57382447 57383015 -145702517 + MLT2B3 LTR ERVL 1 554 0 1947 162 3 19 chr5 57383015 57383123 -145702409 + AluJb SINE Alu 204 312 0 289 333 16 8 chr5 57383157 57383280 -145702252 + L2 LINE L2 1786 1909 -1405 633 319 28 16 chr5 57383465 57383719 -145701813 + Charlie8 DNA MER1_type 1 257 -2160 30234 41 2 1 chr5 57383818 57388531 -145697001 + L1PA5 LINE L1 1436 6152 -2 2267 110 0 0 chr5 57388682 57388991 -145696541 - AluY SINE Alu -2 309 1 235 189 63 63 chr5 57389154 57389249 -145696283 - LTR67 LTR ERVL -424 133 39 1662 182 19 10 chr5 57389315 57389441 -145696091 + AluJo SINE Alu 2 125 -187 189 0 0 0 chr5 57389441 57389462 -145696070 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 297 0 0 0 chr5 57389461 57389494 -145696038 + (CA)n Simple_repeat Simple_repeat 2 34 0 1662 182 19 10 chr5 57389462 57389675 -145695857 + AluJo SINE Alu 125 312 0 494 271 26 20 chr5 57390582 57390733 -145694799 + L1MB7 LINE L1 5930 6081 -103 4108 133 11 22 chr5 57390735 57391454 -145694078 - MER50 LTR ERV1 -23 711 1 356 200 200 55 chr5 57393679 57393789 -145691743 + FLAM_A SINE Alu 8 133 0 350 239 97 82 chr5 57394410 57394522 -145691010 - L1MC4a LINE L1 -1866 5942 5833 2368 87 0 10 chr5 57394522 57394834 -145690698 - AluY SINE Alu -1 310 2 350 239 97 82 chr5 57394834 57395052 -145690480 - L1MC4a LINE L1 -1975 5833 5607 3377 99 17 36 chr5 57395423 57395751 -145689781 - L1MA3 LINE L1 0 6305 5972 2031 155 134 8 chr5 57395751 57396131 -145689401 - MSTA LTR MaLR 0 428 1 8385 153 38 34 chr5 57396131 57397244 -145688288 - MSTA-int LTR MaLR 0 1580 458 2289 122 3 0 chr5 57397244 57397556 -145687976 - AluSp SINE Alu 0 313 1 8385 153 38 34 chr5 57397556 57398014 -145687518 - MSTA-int LTR MaLR -1122 458 3 1678 154 148 34 chr5 57398016 57398400 -145687132 - MSTA LTR MaLR 0 428 1 3377 99 17 36 chr5 57398400 57398642 -145686890 - L1MA3 LINE L1 -333 5972 5742 20708 155 23 26 chr5 57398644 57402163 -145683369 - L1 LINE L1 -3135 4430 902 2339 98 0 3 chr5 57402163 57402468 -145683064 - AluSg SINE Alu -6 304 1 20708 155 23 26 chr5 57402468 57403237 -145682295 - L1 LINE L1 -6663 902 155 2356 79 3 16 chr5 57403237 57403540 -145681992 + AluSp SINE Alu 3 301 -12 20708 155 23 26 chr5 57403540 57403686 -145681846 - L1 LINE L1 -7410 155 10 2313 190 79 34 chr5 57403943 57404496 -145681036 - MLT1E3 LTR MaLR -14 610 28 1629 206 22 8 chr5 57404496 57404855 -145680677 + MLT1A1 LTR MaLR 1 364 -1 2313 190 79 34 chr5 57404855 57404885 -145680647 - MLT1E3 LTR MaLR -596 28 1 252 100 0 0 chr5 57405013 57405053 -145680479 + (TC)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr5 57405524 57405559 -145679973 + AT_rich Low_complexity Low_complexity 1 35 0 3030 133 51 4 chr5 57405564 57406076 -145679456 - L1PA16 LINE L1 -22 6144 5609 812 177 14 0 chr5 57406103 57406250 -145679282 + MLT1C LTR MaLR 319 467 0 354 305 48 19 chr5 57406636 57406741 -145678791 - L2 LINE L2 -3 3269 3162 579 375 68 11 chr5 57406963 57407344 -145678188 - L2 LINE L2 -341 2973 2571 1289 191 8 115 chr5 57407757 57408139 -145677393 - MLT1A1 LTR MaLR 0 365 25 4015 160 38 65 chr5 57408158 57408491 -145677041 - L1MB3 LINE L1 -39 6380 6040 5329 143 8 8 chr5 57408491 57410035 -145675497 + L1PA15 LINE L1 4553 6113 -52 2566 127 0 5 chr5 57410035 57410412 -145675120 - THE1C LTR MaLR 0 375 1 5329 143 8 8 chr5 57410412 57410450 -145675082 + L1PA15 LINE L1 6112 6149 -16 4015 160 38 65 chr5 57410450 57410557 -145674975 - L1MB3 LINE L1 -379 6040 5932 1953 162 0 0 chr5 57410557 57410853 -145674679 - AluSx SINE Alu -16 296 1 4015 160 38 65 chr5 57410853 57411990 -145673542 - L1MB3 LINE L1 -487 5932 4856 707 70 35 44 chr5 57411990 57412220 -145673312 + (TA)n Simple_repeat Simple_repeat 1 227 0 25 31 0 0 chr5 57412222 57412254 -145673278 + AT_rich Low_complexity Low_complexity 1 32 0 300 200 44 33 chr5 57412254 57412344 -145673188 - L1MC4 LINE L1 -1339 6703 6613 5312 226 37 58 chr5 57412349 57412908 -145672624 - L1MB3 LINE L1 -1536 4846 4277 2060 130 0 19 chr5 57412908 57413224 -145672308 - AluSg SINE Alu 0 310 1 5312 226 37 58 chr5 57413224 57414402 -145671130 - L1MB3 LINE L1 -2105 4277 3076 5455 128 21 14 chr5 57414402 57415555 -145669977 - L1PA16 LINE L1 -6 6160 4978 2341 97 3 0 chr5 57415555 57415853 -145669679 - AluSp SINE Alu -14 299 1 5455 128 21 14 chr5 57415853 57416556 -145668976 - L1PA16 LINE L1 -1188 4978 4281 5312 226 37 58 chr5 57416556 57416726 -145668806 - L1MB3 LINE L1 -3306 3076 2980 2566 59 0 3 chr5 57416726 57417033 -145668499 + AluY SINE Alu 1 306 -5 5312 226 37 58 chr5 57417033 57417143 -145668389 - L1MB3 LINE L1 -3402 2980 2869 6170 158 47 69 chr5 57417150 57417422 -145668110 - L1MB3 LINE L1 -4883 1501 1225 2092 135 6 13 chr5 57417422 57417733 -145667799 - AluSq SINE Alu -4 309 1 6170 158 47 69 chr5 57417733 57417852 -145667680 - L1MB3 LINE L1 -5159 1225 1105 2138 138 3 0 chr5 57417852 57418150 -145667382 - AluSx SINE Alu -13 299 1 6170 158 47 69 chr5 57418150 57418684 -145666848 - L1MB3 LINE L1 -5279 1105 561 2029 158 7 0 chr5 57418684 57418981 -145666551 - AluSx SINE Alu -13 299 1 6170 158 47 69 chr5 57418981 57419082 -145666450 - L1MB3 LINE L1 -5823 561 459 2393 102 0 9 chr5 57419082 57419397 -145666135 + AluSx SINE Alu 1 312 0 6170 158 47 69 chr5 57419397 57419894 -145665638 - L1MB3 LINE L1 -5925 459 8 2495 71 0 0 chr5 57420030 57420326 -145665206 + AluY SINE Alu 1 296 -15 1947 127 34 14 chr5 57420638 57420930 -145664602 + AluSx SINE Alu 1 298 -14 2111 110 31 0 chr5 57420935 57421225 -145664307 + AluSc SINE Alu 1 299 -10 349 390 8 0 chr5 57421634 57421757 -145663775 + L2 LINE L2 3147 3270 -2 509 138 0 0 chr5 57422268 57422348 -145663184 + MADE1 DNA Mariner 1 80 0 2405 59 0 33 chr5 57422475 57422780 -145662752 + AluY SINE Alu 1 295 -16 438 20 0 0 chr5 57422781 57422832 -145662700 + (TG)n Simple_repeat Simple_repeat 2 52 0 1197 168 157 87 chr5 57423759 57424129 -145661403 - MSTD LTR MaLR 0 396 1 1229 138 9 27 chr5 57424191 57424416 -145661116 - L1MC1 LINE L1 -645 5688 5468 3382 141 27 31 chr5 57424419 57425056 -145660476 + L1MC1 LINE L1 5691 6324 -9 312 27 0 0 chr5 57425059 57425096 -145660436 + (CA)n Simple_repeat Simple_repeat 2 38 0 1982 141 0 0 chr5 57425547 57425830 -145659702 - AluSq SINE Alu -30 283 1 357 186 0 93 chr5 57426035 57426132 -145659400 + MER3 DNA MER1_type 22 109 -100 399 149 0 14 chr5 57426148 57426222 -145659310 + MER3 DNA MER1_type 2513 2585 0 266 280 53 8 chr5 57427103 57427235 -145658297 - HAL1b LINE L1 0 1348 1211 580 338 93 20 chr5 57427279 57427801 -145657731 - L1ME4a LINE L1 -202 5919 5354 588 214 25 116 chr5 57428227 57428524 -145657008 - MLT1D LTR MaLR -197 270 1 325 271 35 49 chr5 57428608 57428752 -145656780 + L1ME4a LINE L1 5519 5660 -461 260 219 96 0 chr5 57428789 57428862 -145656670 + L1ME4a LINE L1 5936 6015 -106 881 234 0 0 chr5 57429145 57429320 -145656212 + FAM SINE Alu 1 175 0 2395 117 11 70 chr5 57429414 57429868 -145655664 - LTR12 LTR ERV1 -233 481 55 248 231 0 0 chr5 57429910 57429962 -145655570 - LTR30 LTR ERV1 -670 52 1 221 240 60 0 chr5 57431492 57431542 -145653990 + MIR SINE MIR 197 249 -13 589 196 0 0 chr5 57431824 57431921 -145653611 + FLAM_A SINE Alu 20 116 -26 745 245 69 92 chr5 57435664 57436043 -145649489 + MLT1J2 LTR MaLR 5 374 -76 23 0 0 0 chr5 57436043 57436066 -145649466 + AT_rich Low_complexity Low_complexity 1 23 0 363 213 0 0 chr5 57436492 57436567 -145648965 - MER94 DNA DNA 0 134 60 434 246 63 24 chr5 57436689 57436815 -145648717 - MLT1J LTR MaLR -6 589 459 2423 77 0 0 chr5 57436888 57437187 -145648345 + AluY SINE Alu 1 299 -12 1821 174 70 36 chr5 57437327 57437769 -145647763 + LTR2B LTR ERV1 34 490 0 1762 108 67 11 chr5 57438017 57438329 -145647203 + AluSx SINE Alu 1 327 0 960 262 165 20 chr5 57438618 57438932 -145646600 + MLT1J2 LTR MaLR 1 385 -65 1852 170 3 0 chr5 57438932 57439226 -145646306 - AluSx SINE Alu -17 295 1 960 262 165 20 chr5 57439226 57439304 -145646228 + MLT1J2 LTR MaLR 385 450 0 255 31 0 0 chr5 57439917 57439949 -145645583 + (CA)n Simple_repeat Simple_repeat 2 33 0 401 335 40 20 chr5 57439978 57440178 -145645354 + MIR SINE MIR 10 213 -49 22 35 0 0 chr5 57440183 57440212 -145645320 + AT_rich Low_complexity Low_complexity 1 29 0 2321 107 0 0 chr5 57440318 57440617 -145644915 + AluSx SINE Alu 1 299 -13 379 317 84 87 chr5 57440832 57441248 -145644284 + LTR67 LTR ERVL 2 416 -141 1142 243 142 40 chr5 57441505 57441545 -145643987 - L2 LINE L2 -232 3081 3046 943 251 84 81 chr5 57441545 57442066 -145643466 + LTR33A LTR ERVL 1 523 0 1142 243 142 40 chr5 57442066 57442514 -145643018 - L2 LINE L2 -267 3046 2522 1039 197 21 22 chr5 57442525 57442846 -145642686 - L1MC/D LINE L1 -743 5403 5137 2121 112 0 14 chr5 57442846 57443152 -145642380 - AluSx SINE Alu 0 302 1 1039 197 21 22 chr5 57443152 57443255 -145642277 - L1MC/D LINE L1 -1009 5137 5035 2011 287 80 29 chr5 57443257 57443906 -145641626 - L2 LINE L2 -1705 1609 928 626 269 112 48 chr5 57443912 57444190 -145641342 - MLT1J LTR MaLR -144 367 63 198 0 0 0 chr5 57444190 57444212 -145641320 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 626 269 112 48 chr5 57444212 57444264 -145641268 - MLT1J LTR MaLR -448 63 16 627 206 59 6 chr5 57444264 57444434 -145641098 + MER104 DNA MER2_type 1 179 -1 325 333 54 9 chr5 57445542 57445653 -145639879 - L2 LINE L2 0 3272 3157 664 249 84 45 chr5 57445805 57446114 -145639418 - MLT1L LTR MaLR -10 605 285 182 312 65 0 chr5 57446321 57446398 -145639134 - L2 LINE L2 -233 3039 2958 3767 192 42 55 chr5 57446915 57448354 -145637178 + L1MD1 LINE L1 4812 6232 -10 1658 114 0 0 chr5 57450732 57450960 -145634572 - AluSg/x SINE Alu 0 312 85 2561 61 0 0 chr5 57451688 57451999 -145633533 + AluY SINE Alu 1 311 0 2153 112 0 0 chr5 57452244 57452538 -145632994 - AluSq SINE Alu -15 298 5 1655 163 47 11 chr5 57453294 57453570 -145631962 - AluSx SINE Alu -26 286 1 636 309 43 36 chr5 57453768 57454072 -145631460 + MLT1I LTR MaLR 98 403 -6 2259 63 18 3 chr5 57454632 57454916 -145630616 + AluSg SINE Alu 1 288 -22 516 284 68 11 chr5 57455131 57455307 -145630225 - MIR SINE MIR -6 256 71 1766 153 28 59 chr5 57455308 57455590 -145629942 + MER2 DNA MER2_type 2 272 -72 2326 94 0 7 chr5 57455590 57455888 -145629644 - AluSg SINE Alu -13 297 2 1766 153 28 59 chr5 57455888 57455959 -145629573 + MER2 DNA MER2_type 272 344 0 26 50 0 0 chr5 57456756 57456796 -145628736 + AT_rich Low_complexity Low_complexity 1 40 0 307 264 196 27 chr5 57456971 57457119 -145628413 - MER5B DNA MER1_type 0 178 6 293 311 47 9 chr5 57458213 57458319 -145627213 - L3 LINE CR1 -1 1576 1467 529 285 37 42 chr5 57458399 57458613 -145626919 - L3 LINE CR1 -264 1313 1101 26 0 0 0 chr5 57458710 57458736 -145626796 + AT_rich Low_complexity Low_complexity 1 26 0 237 267 0 50 chr5 57458736 57458837 -145626695 - L1ME1 LINE L1 -25 6141 6046 1870 229 84 10 chr5 57458898 57459415 -145626117 - L1ME1 LINE L1 -123 6043 5477 2507 84 0 0 chr5 57459415 57459724 -145625808 - AluSx SINE Alu -3 309 1 1870 229 84 10 chr5 57459724 57459788 -145625744 - L1ME1 LINE L1 -689 5477 5419 * 3790 179 63 16 chr5 57459783 57460681 -145624851 - L1MB8 LINE L1 0 6178 5239 930 201 102 62 chr5 57460682 57461176 -145624356 - MER39 LTR ERV1 -9 666 6 492 263 46 14 chr5 57461182 57461387 -145624145 - L1MB8 LINE L1 -900 5246 5032 2229 81 7 10 chr5 57461387 57461682 -145623850 - AluSg SINE Alu -16 294 1 492 263 46 14 chr5 57461682 57461693 -145623839 - L1MB8 LINE L1 -1114 5032 5023 1808 174 0 22 chr5 57461696 57462013 -145623519 - AluJo SINE Alu -2 310 1 2927 215 98 22 chr5 57462017 57462317 -145623215 - L1MB8 LINE L1 -1445 4701 4425 1720 198 10 19 chr5 57462317 57462630 -145622902 - AluJo SINE Alu -2 310 1 2927 215 98 22 chr5 57462630 57463353 -145622179 - L1MB8 LINE L1 -1721 4425 3601 515 223 102 0 chr5 57463344 57463541 -145621991 - L1MB8 LINE L1 -3143 3003 2787 * 686 91 8 50 chr5 57464143 57464264 -145621268 - AluSc SINE Alu -193 116 1 1645 136 3 52 chr5 57464271 57464595 -145620937 - AluSx SINE Alu -4 308 1 184 346 0 0 chr5 57465708 57465760 -145619772 + L3 LINE CR1 1445 1496 -81 226 281 35 18 chr5 57465768 57465882 -145619650 - LTR16C LTR ERVL -3 488 373 417 288 268 15 chr5 57467249 57467447 -145618085 + MIR SINE MIR 2 249 -13 203 234 13 0 chr5 57467502 57467579 -145617953 + CT-rich Low_complexity Low_complexity 2 79 0 644 312 50 13 chr5 57467638 57467936 -145617596 + L2 LINE L2 1743 2051 -1263 518 91 40 81 chr5 57468166 57468265 -145617267 + MLT1D LTR MaLR 1 95 -410 1336 126 0 51 chr5 57468266 57468481 -145617051 + AluJo SINE Alu 88 291 -21 1619 180 120 23 chr5 57468488 57468872 -145616660 + MLT1D LTR MaLR 85 505 0 265 331 47 39 chr5 57469265 57469392 -145616140 + L2 LINE L2 2257 2384 -930 613 123 41 41 chr5 57469399 57469570 -145615962 + CT-rich Low_complexity Low_complexity 2 172 0 2132 124 20 0 chr5 57469580 57469886 -145615646 - AluSp SINE Alu -1 312 1 236 341 84 36 chr5 57470326 57470493 -145615039 + L2 LINE L2 2910 3084 -188 2814 153 63 40 chr5 57470507 57470683 -145614849 - MER6A DNA MER2_type -268 597 427 2412 60 0 0 chr5 57470683 57471014 -145614518 + AluY SINE Alu 1 331 0 2814 153 63 40 chr5 57471014 57471419 -145614113 - MER6A DNA MER2_type -438 427 1 289 403 50 31 chr5 57471421 57471580 -145613952 + L2 LINE L2 3102 3263 -9 2044 72 91 0 chr5 57471665 57471930 -145613602 - AluY SINE Alu -22 289 1 2079 93 57 0 chr5 57473113 57473393 -145612139 - AluSq SINE Alu -17 296 1 1777 148 23 13 chr5 57473518 57473822 -145611710 - AluSx SINE Alu -5 307 1 2408 67 14 0 chr5 57474224 57474521 -145611011 + AluSp SINE Alu 2 302 -11 2323 118 0 6 chr5 57474806 57475121 -145610411 + AluSq SINE Alu 1 313 0 2381 90 0 3 chr5 57475272 57475582 -145609950 - AluY SINE Alu -2 309 1 1967 157 0 0 chr5 57475584 57475878 -145609654 - AluSq SINE Alu -14 299 6 29341 91 5 8 chr5 57475985 57481277 -145604255 + L1PA7 LINE L1 877 6151 -3 820 255 109 45 chr5 57481297 57481912 -145603620 + L1MEc LINE L1 836 1446 -4769 1419 173 73 11 chr5 57481941 57482213 -145603319 + AluJo SINE Alu 23 311 -1 4407 201 81 14 chr5 57482213 57483150 -145602382 + L1MB4 LINE L1 4020 4892 -1288 2125 100 4 0 chr5 57483150 57483459 -145602073 + AluSg SINE Alu 1 310 0 4407 201 81 14 chr5 57483459 57484438 -145601094 + L1MB4 LINE L1 4892 6174 -6 1223 195 15 50 chr5 57484518 57484779 -145600753 + MLT1A2 LTR MaLR 1 252 -122 1660 251 61 14 chr5 57485145 57485292 -145600240 + L1MEc LINE L1 1742 1881 -4334 2621 36 3 0 chr5 57485292 57485600 -145599932 + AluY SINE Alu 1 309 -2 1660 251 61 14 chr5 57485600 57486521 -145599011 + L1MEc LINE L1 1881 2896 -3319 558 104 0 104 chr5 57487156 57487271 -145598261 - FLAM_C SINE Alu -9 134 32 858 224 153 34 chr5 57487278 57487716 -145597816 + L1ME4a LINE L1 5613 6102 -19 1980 78 34 84 chr5 57487784 57488104 -145597428 - AluSg SINE Alu -6 304 1 243 0 0 0 chr5 57488151 57488178 -145597354 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1813 136 11 4 chr5 57488181 57488461 -145597071 - AluSx SINE Alu -30 282 1 1630 173 17 10 chr5 57489001 57489296 -145596236 - AluJb SINE Alu -13 299 3 348 208 164 18 chr5 57489318 57489474 -145596058 - MIR SINE MIR -63 199 23 271 328 0 38 chr5 57489676 57489859 -145595673 + GA-rich Low_complexity Low_complexity 1 176 0 591 327 81 52 chr5 57490503 57491069 -145594463 + L2 LINE L2 2697 3267 -46 180 0 0 0 chr5 57492155 57492175 -145593357 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 199 163 279 0 chr5 57495064 57495107 -145590425 + L2 LINE L2 3217 3271 -1 406 322 198 16 chr5 57496293 57496607 -145588925 + L3 LINE CR1 865 1235 -342 297 203 54 14 chr5 57496609 57496683 -145588849 - Charlie1 DNA MER1_type -4 2757 2681 9021 119 86 24 chr5 57496691 57498244 -145587288 + Tigger1 DNA MER2_type 1 1649 -769 4531 130 78 4 chr5 57498541 57499274 -145586258 + Tigger1 DNA MER2_type 1632 2418 0 937 232 88 27 chr5 57499274 57499602 -145585930 - Charlie1 DNA MER1_type -87 2674 2327 1071 191 24 0 chr5 57499606 57499816 -145585716 - Charlie1 DNA MER1_type -541 2220 2006 693 124 7 51 chr5 57499822 57499959 -145585573 - L1PA16 LINE L1 -1 6165 6035 244 205 0 103 chr5 57499960 57500038 -145585494 + Charlie1 DNA MER1_type 1949 2018 -743 349 138 299 0 chr5 57500079 57500166 -145585366 - Charlie1 DNA MER1_type -826 1935 1823 1374 167 74 4 chr5 57500211 57500466 -145585066 - MER2 DNA MER2_type 0 345 73 1785 189 58 29 chr5 57500466 57500648 -145584884 + MSTA LTR MaLR 1 176 -252 1890 92 11 0 chr5 57500648 57500908 -145584624 + AluSx SINE Alu 5 267 -45 1785 189 58 29 chr5 57500908 57501105 -145584427 + MSTA LTR MaLR 176 391 -37 1310 104 0 79 chr5 57501105 57501405 -145584127 - AluY SINE Alu 0 304 27 1603 163 10 27 chr5 57501844 57502139 -145583393 + Tigger7 DNA MER2_type 28 317 -233 978 172 78 0 chr5 57502113 57502317 -145583215 + Tigger7 DNA MER2_type 2367 2586 -1 * 186 189 0 0 chr5 57503561 57503598 -145581934 + T-rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 57503978 57504001 -145581531 + AT_rich Low_complexity Low_complexity 1 23 0 2171 77 0 11 chr5 57505001 57505321 -145580211 - AluY SINE Alu 0 317 1 1954 154 0 0 chr5 57505323 57505622 -145579910 - AluSq SINE Alu -14 299 1 22 0 0 0 chr5 57505625 57505647 -145579885 + AT_rich Low_complexity Low_complexity 1 22 0 1769 142 14 10 chr5 57506079 57506374 -145579158 - AluJb SINE Alu -15 297 2 214 360 117 0 chr5 57506407 57506518 -145579014 - L2 LINE L2 -562 2752 2629 1406 136 64 34 chr5 57506537 57506802 -145578730 - Tigger1 DNA MER2_type 0 2418 2146 517 250 79 26 chr5 57506885 57507037 -145578495 - MIR SINE MIR -66 196 37 31 0 0 0 chr5 57507328 57507359 -145578173 + AT_rich Low_complexity Low_complexity 1 31 0 708 303 116 33 chr5 57507806 57508100 -145577432 - MLT1I LTR MaLR -42 367 40 3116 66 45 7 chr5 57508100 57508524 -145577008 + MLT2A1 LTR ERVL 5 444 0 708 303 116 33 chr5 57508524 57508566 -145576966 - MLT1I LTR MaLR -369 40 3 4074 168 15 28 chr5 57509252 57510034 -145575498 - L1MB3 LINE L1 0 6183 5412 2598 181 44 29 chr5 57510033 57510432 -145575100 - L1MC/D LINE L1 -645 5699 5308 * 2018 104 0 47 chr5 57510432 57510749 -145574783 - AluSx SINE Alu -9 303 2 2598 181 44 29 chr5 57510749 57511383 -145574149 - L1MC/D LINE L1 -1036 5308 4637 * 5447 244 39 21 chr5 57511381 57513056 -145572476 - L1MC/D LINE L1 -2327 3819 2115 276 111 0 0 chr5 57513356 57513401 -145572131 + (TG)n Simple_repeat Simple_repeat 1 45 0 291 286 14 64 chr5 57513403 57513543 -145571989 - L1P LINE L1 -1135 5011 4879 332 278 181 32 chr5 57513587 57513835 -145571697 - L1MB3 LINE L1 -1313 4833 4549 1775 179 0 6 chr5 57514645 57514957 -145570575 + AluJo SINE Alu 1 310 -2 692 281 112 33 chr5 57515498 57515995 -145569537 - MLT1G1 LTR MaLR -10 585 1 2655 157 25 6 chr5 57516273 57516905 -145568627 + L1MC/D LINE L1 5123 5783 -383 208 183 133 33 chr5 57517024 57517084 -145568448 - MIR3 SINE MIR -6 202 137 1875 208 69 11 chr5 57517712 57518257 -145567275 - L1M3 LINE L1 -426 5754 5176 2148 112 3 3 chr5 57518525 57518837 -145566695 - AluSp SINE Alu -1 312 1 2165 117 3 3 chr5 57518839 57519148 -145566384 - AluSx SINE Alu -3 309 1 2491 47 3 0 chr5 57519544 57519843 -145565689 - AluY SINE Alu -11 300 1 1769 155 10 14 chr5 57520145 57520436 -145565096 + Tigger7 DNA MER2_type 28 317 -233 962 176 78 0 chr5 57520410 57520614 -145564918 + Tigger7 DNA MER2_type 2367 2586 -1 * 212 196 0 22 chr5 57521845 57521891 -145563641 + T-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr5 57522271 57522294 -145563238 + AT_rich Low_complexity Low_complexity 1 23 0 724 327 120 20 chr5 57522970 57523377 -145562155 + L2 LINE L2 2517 2964 -350 2225 90 7 3 chr5 57523584 57523885 -145561647 + AluSq SINE Alu 1 302 -11 442 195 0 13 chr5 57524259 57524336 -145561196 + MER2 DNA MER2_type 2 77 -268 279 143 0 0 chr5 57524336 57524378 -145561154 - MSTA LTR MaLR 0 428 387 2337 91 0 0 chr5 57524381 57524679 -145560853 + AluY SINE Alu 5 302 -9 1202 73 0 0 chr5 57524679 57524850 -145560682 + AluY SINE Alu 133 303 0 1829 188 58 24 chr5 57524850 57525045 -145560487 - MSTA LTR MaLR -37 391 204 1885 96 11 0 chr5 57525045 57525305 -145560227 - AluSx SINE Alu -45 267 5 1829 188 58 24 chr5 57525305 57525487 -145560045 - MSTA LTR MaLR -224 204 1 1357 171 74 4 chr5 57525487 57525742 -145559790 + MER2 DNA MER2_type 73 345 0 349 138 299 0 chr5 57525787 57525874 -145559658 + Charlie1 DNA MER1_type 1823 1935 -826 244 205 0 103 chr5 57525915 57525993 -145559539 - Charlie1 DNA MER1_type -743 2018 1949 693 124 7 51 chr5 57525994 57526131 -145559401 + L1PA16 LINE L1 6035 6165 -1 1071 191 24 0 chr5 57526137 57526347 -145559185 + Charlie1 DNA MER1_type 2006 2220 -541 933 226 88 27 chr5 57526351 57526679 -145558853 + Charlie1 DNA MER1_type 2327 2674 -87 4554 131 76 4 chr5 57526679 57527413 -145558119 - Tigger1 DNA MER2_type 0 2418 1632 9044 117 86 24 chr5 57527710 57529262 -145556270 - Tigger1 DNA MER2_type -769 1649 1 316 219 55 0 chr5 57529270 57529343 -145556189 + Charlie1 DNA MER1_type 2681 2757 -4 473 323 195 10 chr5 57529345 57529658 -145555874 - L3 LINE CR1 -342 1235 865 199 163 279 0 chr5 57530841 57530884 -145554648 - L2 LINE L2 -1 3271 3217 180 0 0 0 chr5 57533765 57533785 -145551747 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 722 329 79 37 chr5 57534870 57535428 -145550104 - L2 LINE L2 -46 3267 2697 271 328 0 38 chr5 57536073 57536256 -145549276 + CT-rich Low_complexity Low_complexity 1 176 0 348 208 164 18 chr5 57536458 57536614 -145548918 + MIR SINE MIR 23 199 -63 1644 169 17 10 chr5 57536636 57536931 -145548601 + AluJb SINE Alu 3 299 -13 9146 135 113 3 chr5 57537179 57538806 -145546726 - L1P3 LINE L1 -4660 1791 6 575 309 32 44 chr5 57539119 57539459 -145546073 - L1MEc LINE L1 -5994 402 67 1204 199 86 49 chr5 57539875 57540373 -145545159 + MER39 LTR ERV1 8 687 -6 180 0 0 0 chr5 57541187 57541207 -145544325 + (TTCTG)n Simple_repeat Simple_repeat 2 21 0 220 148 98 0 chr5 57541214 57541275 -145544257 + CT-rich Low_complexity Low_complexity 5 71 0 526 218 0 10 chr5 57541277 57541378 -145544154 - FLAM_A SINE Alu -33 109 10 1902 118 7 7 chr5 57541541 57541821 -145543711 + AluSq SINE Alu 1 280 -33 210 37 0 0 chr5 57541821 57541848 -145543684 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1449 195 22 35 chr5 57541873 57542186 -145543346 + AluJb SINE Alu 3 311 -1 394 208 0 0 chr5 57542607 57542679 -145542853 - MER39 LTR ERV1 -30 677 606 651 211 0 16 chr5 57542692 57542820 -145542712 - FLAM_A SINE Alu -7 126 1 7656 182 83 31 chr5 57542849 57543267 -145542265 - LTR49-int LTR ERV1 -326 4610 4215 1901 171 91 15 chr5 57543267 57543665 -145541867 + MSTA LTR MaLR 1 428 0 7656 182 83 31 chr5 57543665 57545075 -145540457 - LTR49-int LTR ERV1 -721 4215 2703 1397 149 41 4 chr5 57545084 57545353 -145540179 + L1PA13 LINE L1 5883 6161 -2 1410 202 109 106 chr5 57545353 57546205 -145539327 - LTR49-int LTR ERV1 -2395 2541 1687 333 250 117 33 chr5 57546221 57546341 -145539191 - LTR57-int LTR ERVL -3832 1511 1382 277 226 176 29 chr5 57546452 57546554 -145538978 - MER67D LTR ERV1 -294 220 104 1058 216 84 81 chr5 57546599 57546993 -145538539 - LTR49-int LTR ERV1 -4064 872 478 2463 156 22 29 chr5 57546993 57547410 -145538122 - MSTB1 LTR MaLR 0 432 19 327 264 209 7 chr5 57547496 57547644 -145537888 - LTR49-int LTR ERV1 -5638 693 516 236 296 174 0 chr5 57547651 57547749 -145537783 + L2 LINE L2 3197 3311 -2 195 232 347 11 chr5 57547823 57547918 -145537614 - MIR SINE MIR -121 141 15 24 0 0 0 chr5 57549845 57549869 -145535663 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 57551065 57551087 -145534445 + AT_rich Low_complexity Low_complexity 1 22 0 958 55 79 0 chr5 57551916 57552043 -145533489 + MER85 DNA T2_type 1 137 -2 1373 141 157 23 chr5 57553324 57553623 -145531909 + MER44D DNA MER2_type 1 609 0 21 0 0 0 chr5 57553704 57553725 -145531807 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 57553812 57553837 -145531695 + AT_rich Low_complexity Low_complexity 1 25 0 1551 192 3 16 chr5 57553844 57554152 -145531380 - AluJo SINE Alu -8 304 1 503 241 123 54 chr5 57555245 57555448 -145530084 + MER20 DNA MER1_type 1 217 -2 409 271 60 7 chr5 57555550 57555701 -145529831 + MLT1E LTR MaLR 1 159 -434 4229 147 89 5 chr5 57555838 57556602 -145528930 - L1PA16 LINE L1 -1 6165 5338 1531 211 45 48 chr5 57556903 57557391 -145528141 - MER39 LTR ERV1 0 707 23 31 26 0 0 chr5 57557808 57557846 -145527686 + AT_rich Low_complexity Low_complexity 1 38 0 34 72 0 0 chr5 57558109 57558178 -145527354 + AT_rich Low_complexity Low_complexity 1 69 0 2409 56 7 7 chr5 57558399 57558704 -145526828 - AluY SINE Alu -6 305 1 260 204 21 65 chr5 57560295 57560388 -145525144 - L1ME4a LINE L1 -97 6024 5936 343 286 109 0 chr5 57560398 57560545 -145524987 - L1M4 LINE L1 -1674 4472 4310 260 204 21 65 chr5 57562367 57562460 -145523072 - L1ME4a LINE L1 -97 6024 5936 380 270 177 23 chr5 57562488 57562833 -145522699 - L1M4 LINE L1 -1694 4452 4055 1156 208 47 59 chr5 57563843 57564270 -145521262 - L1ME3A LINE L1 0 6170 5666 273 274 151 0 chr5 57564930 57565036 -145520496 - L1ME LINE L1 -5943 127 6 2256 112 0 0 chr5 57566350 57566653 -145518879 + AluSx SINE Alu 5 307 -5 180 0 0 0 chr5 57567485 57567505 -145518027 + (A)n Simple_repeat Simple_repeat 1 20 0 478 288 0 35 chr5 57567827 57567995 -145517537 - L3 LINE CR1 -535 1042 881 351 292 156 13 chr5 57567995 57568149 -145517383 + MIR SINE MIR 2 177 -85 302 239 401 12 chr5 57568497 57568664 -145516868 + MIR SINE MIR 4 235 -27 16733 33 5 3 chr5 57568706 57571514 -145514018 - L1PA4 LINE L1 -1 6154 3336 24466 58 3 4 chr5 57571521 57574672 -145510860 - L1PA4 LINE L1 -2995 3151 4 353 285 32 65 chr5 57575210 57575333 -145510199 + L2 LINE L2 3152 3270 -2 1963 162 7 0 chr5 57575356 57575664 -145509868 + AluSx SINE Alu 3 312 0 2289 62 3 62 chr5 57575884 57576204 -145509328 + AluSp SINE Alu 1 301 -12 277 299 25 76 chr5 57576424 57576581 -145508951 + MIR3 SINE MIR 21 169 -39 219 216 39 20 chr5 57576844 57576895 -145508637 - L3 LINE CR1 -568 1009 958 1869 116 32 39 chr5 57577177 57577461 -145508071 - AluSx SINE Alu -30 282 1 341 233 155 9 chr5 57577548 57577664 -145507868 - MIR SINE MIR -31 231 99 757 209 32 6 chr5 57577698 57577856 -145507676 + MER58B DNA MER1_type 179 340 -1 190 228 174 65 chr5 57578324 57578416 -145507116 - L2 LINE L2 -3 3269 3168 1226 158 161 0 chr5 57579014 57579293 -145506239 + MER33 DNA MER1_type 1 324 0 872 193 153 40 chr5 57580937 57581310 -145504222 - LTR37A LTR ERV1 -4 422 8 637 232 90 26 chr5 57581311 57581544 -145503988 - MER31-int LTR ERV1 -762 5569 5322 206 309 15 44 chr5 57581560 57581628 -145503904 - MER5A DNA MER1_type -87 102 37 450 179 21 103 chr5 57581917 57582062 -145503470 - MER31-int LTR ERV1 -1987 2949 2817 275 225 50 0 chr5 57582605 57582685 -145502847 - MER31-int LTR ERV1 -3021 1915 1832 1364 241 91 21 chr5 57582697 57583117 -145502415 - MER39 LTR ERV1 0 707 259 260 242 44 22 chr5 57583097 57583188 -145502344 - LTR48B LTR ERV1 -551 93 1 * 486 127 0 0 chr5 57583232 57583311 -145502221 + HY3 scRNA scRNA 22 100 -1 21 0 0 0 chr5 57583311 57583332 -145502200 + AT_rich Low_complexity Low_complexity 1 21 0 252 222 103 16 chr5 57583544 57583670 -145501862 - MER31-int LTR ERV1 -3490 1446 1310 2525 56 0 3 chr5 57583857 57584161 -145501371 - AluY SINE Alu -8 303 1 273 221 51 101 chr5 57584162 57584320 -145501212 - MER31-int LTR ERV1 -3714 1222 1073 584 189 75 48 chr5 57584697 57584925 -145500607 - LTR37A LTR ERV1 -1 425 192 2468 197 73 7 chr5 57584965 57585528 -145500004 + MER82 DNA MER2_type 2 601 -52 311 244 57 65 chr5 57588802 57588925 -145496607 + MIR SINE MIR 48 169 -93 4863 33 3 5 chr5 57588973 57589555 -145495977 + L1PA3 LINE L1 5575 6155 0 308 137 39 0 chr5 57589600 57589651 -145495881 + L2 LINE L2 2909 2961 -353 200 205 0 0 chr5 57589826 57589865 -145495667 - MIR SINE MIR 0 262 224 671 263 50 0 chr5 57589871 57590031 -145495501 + MIR SINE MIR 1 168 -94 180 225 183 0 chr5 57590088 57590159 -145495373 - MIR SINE MIR -39 223 140 208 320 197 6 chr5 57590771 57590949 -145494583 + L3b LINE CR1 1117 1328 -255 387 291 50 21 chr5 57591064 57591205 -145494327 - MER5A DNA MER1_type -1 188 44 210 261 0 0 chr5 57591332 57591378 -145494154 + (CATA)n Simple_repeat Simple_repeat 3 48 0 22 56 0 0 chr5 57592357 57592393 -145493139 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 57592558 57592582 -145492950 + AT_rich Low_complexity Low_complexity 1 24 0 576 240 6 78 chr5 57592697 57592806 -145492726 - MIR SINE MIR -76 186 93 1439 168 6 102 chr5 57592806 57593128 -145492404 + AluJo SINE Alu 1 291 -21 576 240 6 78 chr5 57593128 57593197 -145492335 - MIR SINE MIR -169 93 21 230 315 0 0 chr5 57593469 57593542 -145491990 + L1M3 LINE L1 5695 5767 -401 1943 244 8 47 chr5 57593755 57594157 -145491375 - L1PA4 LINE L1 0 6155 5770 7216 41 21 2 chr5 57594160 57595432 -145490100 - L1PA3 LINE L1 0 6155 4873 12572 35 1 0 chr5 57595434 57597017 -145488515 + L1PA3 LINE L1 3301 4885 -1261 25 0 0 0 chr5 57597122 57597147 -145488385 + AT_rich Low_complexity Low_complexity 1 25 0 6054 88 35 5 chr5 57597307 57598482 -145487050 + L1PA11 LINE L1 4954 6174 0 738 153 15 15 chr5 57598545 57598676 -145486856 + FLAM_C SINE Alu 2 132 -1 5395 168 77 24 chr5 57598684 57598775 -145486757 + L1 LINE L1 2835 2920 -3226 1608 150 13 85 chr5 57598775 57599081 -145486451 + AluJb SINE Alu 2 285 -27 5395 168 77 24 chr5 57599081 57600295 -145485237 + L1 LINE L1 2920 4209 -1937 4704 109 89 34 chr5 57600366 57601337 -145484195 - Tigger3b DNA MER2_type 0 1231 208 271 127 32 0 chr5 57601339 57601402 -145484130 + (TA)n Simple_repeat Simple_repeat 1 65 0 1270 143 0 62 chr5 57601408 57601632 -145483900 + AluSx SINE Alu 64 273 -39 199 104 42 0 chr5 57601735 57601783 -145483749 + (TA)n Simple_repeat Simple_repeat 1 50 0 1947 137 0 42 chr5 57601784 57602090 -145483442 - AluSx SINE Alu -19 293 1 1017 216 39 0 chr5 57602090 57602294 -145483238 - Tigger3b DNA MER2_type -1019 212 1 694 188 11 65 chr5 57602309 57602585 -145482947 + L1 LINE L1 4239 4499 -1647 2537 206 36 21 chr5 57602649 57603369 -145482163 + L1MA9 LINE L1 2478 3208 -4358 1130 186 45 5 chr5 57603697 57603918 -145481614 + MSTB LTR MaLR 197 426 0 6243 245 85 20 chr5 57603921 57605258 -145480274 + L1MA9 LINE L1 3537 4786 -2945 2254 123 7 0 chr5 57605258 57605566 -145479966 + AluSx SINE Alu 1 310 -2 6243 245 85 20 chr5 57605566 57608127 -145477405 + L1MA9 LINE L1 4786 7710 -21 1737 123 74 0 chr5 57608191 57608515 -145477017 + L1MA8 LINE L1 5938 6285 -6 6865 59 8 1 chr5 57608515 57609924 -145475608 - L1PA6 LINE L1 -5 6149 4745 25 0 0 0 chr5 57611092 57611117 -145474415 + AT_rich Low_complexity Low_complexity 1 25 0 509 176 0 70 chr5 57611124 57611266 -145474266 - FRAM SINE Alu -8 168 37 16613 64 9 5 chr5 57612933 57615900 -145469632 - L1PA6 LINE L1 -139 6015 3041 30942 91 15 11 chr5 57616001 57620660 -145464872 - L1P LINE L1 -1458 4688 12 550 288 70 19 chr5 57620700 57620915 -145464617 + MLT1A2 LTR MaLR 100 325 -49 20352 181 41 29 chr5 57621109 57627498 -145458034 - L1PA11 LINE L1 -4 6485 1 532 168 32 0 chr5 57627541 57627636 -145457896 + MSTA LTR MaLR 9 106 -322 4790 111 48 82 chr5 57628148 57629888 -145455644 + L1PA16 LINE L1 4428 6157 -9 30 27 0 0 chr5 57629888 57629925 -145455607 + AT_rich Low_complexity Low_complexity 1 37 0 17378 121 13 45 chr5 57630051 57636519 -145449013 + L1PA8 LINE L1 2 6187 0 1280 249 130 15 chr5 57636544 57637083 -145448449 - L1MC4 LINE L1 -316 7726 7126 1474 202 102 41 chr5 57637960 57638545 -145446987 + MER39 LTR ERV1 7 691 -16 7929 120 5 30 chr5 57638545 57639861 -145445671 + HSMAR1 DNA Mariner 1 1283 -4 1474 202 102 41 chr5 57639861 57639879 -145445653 + MER39 LTR ERV1 691 706 -1 1266 220 83 17 chr5 57639985 57640335 -145445197 - MLT1D LTR MaLR 0 505 133 737 167 9 0 chr5 57640491 57640605 -145444927 + FLAM_C SINE Alu 1 115 -18 207 196 0 22 chr5 57641025 57641071 -145444461 - L2 LINE L2 -6 3307 3263 1476 140 61 25 chr5 57641274 57641552 -145443980 + MER21A LTR ERV1 21 308 -623 1828 140 159 11 chr5 57641557 57641929 -145443603 + MSTA LTR MaLR 1 427 -1 2462 184 60 67 chr5 57641929 57642560 -145442972 + MER21A LTR ERV1 303 929 -2 1546 138 161 0 chr5 57643391 57643651 -145441881 + AluJb SINE Alu 1 302 0 23 68 0 0 chr5 57643927 57643971 -145441561 + AT_rich Low_complexity Low_complexity 1 44 0 293 233 0 0 chr5 57643983 57644043 -145441489 - Charlie1 DNA MER1_type -4 2757 2698 768 275 29 43 chr5 57644057 57644431 -145441101 + L1MC4a LINE L1 3 371 -5674 547 156 0 0 chr5 57644435 57644531 -145441001 + L1MB2 LINE L1 6038 6133 -38 1582 161 8 4 chr5 57644531 57644780 -145440752 + AluSx SINE Alu 1 250 -62 824 250 95 60 chr5 57644933 57645343 -145440189 + L1MC4a LINE L1 4823 5262 -1302 2340 130 71 22 chr5 57645343 57645751 -145439781 + MSTA LTR MaLR 1 428 0 824 250 95 60 chr5 57645751 57645928 -145439604 + L1MC4a LINE L1 5262 5431 -1133 222 174 0 0 chr5 57645934 57645980 -145439552 + GA-rich Low_complexity Low_complexity 1 46 0 2462 260 59 97 chr5 57646071 57648151 -145437381 + L1MC4a LINE L1 5517 7526 -700 746 264 38 64 chr5 57648176 57648521 -145437011 + L1MEc LINE L1 13 348 -6511 1452 277 66 18 chr5 57648707 57649792 -145435740 + L1MEc LINE L1 749 1935 -4953 * 9324 91 15 2 chr5 57649791 57651201 -145434331 - L1PA7 LINE L1 -844 5302 3875 6139 67 32 5 chr5 57651201 57652004 -145433528 + L1PA7 LINE L1 5313 6143 -11 1593 202 49 15 chr5 57652582 57653089 -145432443 + L1MEc LINE L1 1899 2429 -4529 2082 138 0 10 chr5 57653089 57653387 -145432145 + AluSx SINE Alu 10 304 -8 1593 202 49 15 chr5 57653387 57653525 -145432007 + L1MEc LINE L1 2429 2561 -4397 * 13775 198 18 30 chr5 57653515 57659197 -145426335 + L1PB3 LINE L1 686 6521 -349 264 59 0 0 chr5 57659197 57659231 -145426301 + (CA)n Simple_repeat Simple_repeat 1 34 0 13775 198 18 30 chr5 57659231 57659556 -145425976 + L1PB3 LINE L1 6521 6848 -22 21 0 0 0 chr5 57659576 57659597 -145425935 + AT_rich Low_complexity Low_complexity 1 21 0 1158 226 113 24 chr5 57661075 57661624 -145423908 + L1M1 LINE L1 3032 3629 -3936 5174 202 78 6 chr5 57661646 57663066 -145422466 + L1M1 LINE L1 3735 5256 -2309 1022 240 5 0 chr5 57663067 57663271 -145422261 - AluJo SINE Alu -107 205 1 3197 222 44 45 chr5 57663298 57664557 -145420975 + L1MEc LINE L1 2664 3897 -3060 583 219 31 12 chr5 57664570 57664730 -145420802 + L1MB7 LINE L1 6008 6170 -14 573 235 53 16 chr5 57664742 57664929 -145420603 + L1MC4 LINE L1 7195 7388 -654 7294 148 57 29 chr5 57664938 57666405 -145419127 + L1PA6 LINE L1 11 1519 -4627 5100 125 24 33 chr5 57666405 57667394 -145418138 - MER11C LTR ERVK 0 1071 1 26685 74 4 7 chr5 57667395 57670213 -145415319 + L1PA6 LINE L1 1515 4311 -1843 2173 116 7 13 chr5 57670213 57670523 -145415009 + AluY SINE Alu 1 308 -3 26685 74 4 7 chr5 57670523 57672358 -145413174 + L1PA6 LINE L1 4311 6151 -3 1888 104 4 0 chr5 57672668 57672918 -145412614 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 57672919 57673059 -145412473 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 57673094 57673214 -145412318 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 57673734 57673775 -145411757 + MIR3 SINE MIR 120 160 -48 2338 182 20 61 chr5 57673833 57674357 -145411175 - MLT2B3 LTR ERVL -9 545 44 1538 152 164 0 chr5 57674357 57674680 -145410852 - MSTA LTR MaLR 0 428 53 300 82 20 0 chr5 57674708 57674757 -145410775 - MLT2B3 LTR ERVL -504 50 1 288 143 71 0 chr5 57674771 57674827 -145410705 + Charlie8 DNA MER1_type 72 131 -2286 386 220 121 0 chr5 57675150 57675241 -145410291 - MER5A DNA MER1_type -77 112 11 537 289 13 19 chr5 57675287 57675446 -145410086 - MER5B DNA MER1_type -20 158 1 2141 118 10 3 chr5 57675451 57675755 -145409777 + AluSc SINE Alu 1 306 -3 342 322 91 0 chr5 57677355 57677476 -145408056 - L2 LINE L2 -9 3263 3132 684 285 52 25 chr5 57677592 57677960 -145407572 - HAL1b LINE L1 -641 707 330 242 114 0 0 chr5 57678104 57678139 -145407393 - U2 snRNA snRNA -153 35 1 208 230 50 100 chr5 57678658 57678758 -145406774 - MER5A DNA MER1_type -23 166 72 236 259 17 0 chr5 57681057 57681115 -145404417 + L2 LINE L2 3255 3313 0 664 236 149 0 chr5 57681562 57681723 -145403809 + MER5A DNA MER1_type 4 188 -1 470 168 62 62 chr5 57681724 57681837 -145403695 - MER5A DNA MER1_type -68 121 9 216 97 0 0 chr5 57681887 57681918 -145403614 + (CCA)n Simple_repeat Simple_repeat 2 32 0 463 288 59 29 chr5 57681978 57682148 -145403384 - MER5B DNA MER1_type -3 175 1 447 19 0 0 chr5 57685120 57685172 -145400360 + (CA)n Simple_repeat Simple_repeat 2 53 0 229 297 14 0 chr5 57685696 57685770 -145399762 + MLT1K LTR MaLR 168 242 -346 1662 184 34 0 chr5 57686468 57686762 -145398770 + AluJo SINE Alu 1 304 -8 324 120 0 0 chr5 57688298 57688348 -145397184 + (TG)n Simple_repeat Simple_repeat 2 51 0 3447 160 18 0 chr5 57689101 57689714 -145395818 + L1MB2 LINE L1 5546 6169 -2 297 333 124 0 chr5 57692312 57692489 -145393043 - MIR SINE MIR 0 262 64 502 291 111 0 chr5 57692959 57693131 -145392401 + MIR SINE MIR 72 262 0 1138 120 83 46 chr5 57693215 57693432 -145392100 - THE1B LTR MaLR -2 362 138 1041 153 11 11 chr5 57693432 57693615 -145391917 + L1MC1 LINE L1 6150 6332 -1 2291 85 7 14 chr5 57693774 57694068 -145391464 + AluY SINE Alu 1 292 -19 27 29 0 0 chr5 57694081 57694115 -145391417 + AT_rich Low_complexity Low_complexity 1 34 0 669 225 0 23 chr5 57694202 57694331 -145391201 - FLAM_A SINE Alu -7 126 1 2662 188 87 101 chr5 57694484 57694701 -145390831 + L1MC5 LINE L1 6613 6832 -1129 2157 200 29 4 chr5 57694701 57695157 -145390375 + MLT1C LTR MaLR 1 467 0 2662 188 87 101 chr5 57695157 57695296 -145390236 + L1MC5 LINE L1 6832 6971 -990 2339 106 0 3 chr5 57695296 57695607 -145389925 - AluSg SINE Alu 0 310 1 2662 188 87 101 chr5 57695607 57695625 -145389907 + L1MC5 LINE L1 6971 6988 -973 2036 117 0 3 chr5 57695625 57695935 -145389597 - AluSg SINE Alu 0 309 1 2662 188 87 101 chr5 57695935 57696134 -145389398 + L1MC5 LINE L1 6988 7188 -773 2507 80 6 0 chr5 57696134 57696445 -145389087 + AluSq SINE Alu 1 313 0 2662 188 87 101 chr5 57696445 57697199 -145388333 + L1MC5 LINE L1 7188 7925 -36 2227 89 0 51 chr5 57697237 57697552 -145387980 + AluSg SINE Alu 1 299 -11 3116 200 49 50 chr5 57698839 57700034 -145385498 + L1ME1 LINE L1 4973 6161 -5 237 154 0 0 chr5 57700180 57700219 -145385313 + Alu SINE Alu 131 169 -134 6035 104 226 87 chr5 57700219 57701708 -145383824 + pTR5 LTR ERV1 743 2438 0 673 146 0 9 chr5 57701711 57701821 -145383711 + AluJo SINE Alu 31 139 -173 236 167 0 19 chr5 57701821 57701875 -145383657 + L1MCa LINE L1 65 117 -6309 * 12776 199 32 31 chr5 57701873 57703602 -145381930 + L1M2 LINE L1 414 2139 -4874 2207 128 0 0 chr5 57703602 57703907 -145381625 + AluSg SINE Alu 1 305 -5 12776 199 32 31 chr5 57703907 57706665 -145378867 + L1M2 LINE L1 2139 5201 -1812 207 0 0 0 chr5 57706665 57706688 -145378844 + (TAA)n Simple_repeat Simple_repeat 2 24 0 12776 199 32 31 chr5 57706688 57707896 -145377636 + L1M2 LINE L1 5201 6406 -607 715 153 80 7 chr5 57707907 57708044 -145377488 - L1MCa LINE L1 -5757 669 523 4536 199 84 13 chr5 57708048 57708293 -145377239 + L1MCa LINE L1 1352 1578 -4848 252 0 0 0 chr5 57708293 57708321 -145377211 + (CA)n Simple_repeat Simple_repeat 2 29 0 4536 199 84 13 chr5 57708321 57709783 -145375749 + L1MCa LINE L1 1578 3287 -3139 7376 37 1 2 chr5 57709783 57710784 -145374748 + L1PA3 LINE L1 5153 6152 -3 4536 199 84 13 chr5 57710784 57711490 -145374042 + L1MCa LINE L1 3287 3941 -2485 225 0 0 0 chr5 57711490 57711515 -145374017 + (TTTTTA)n Simple_repeat Simple_repeat 4 28 0 16723 70 12 1 chr5 57711845 57714899 -145370633 - L1PA6 LINE L1 -4 6150 3075 4263 130 7 9 chr5 57714999 57715690 -145369842 + HSMAR1 DNA Mariner 594 1283 -4 1289 217 83 17 chr5 57715814 57716164 -145369368 - MLT1D LTR MaLR 0 505 133 739 183 0 0 chr5 57716320 57716435 -145369097 + FLAM_C SINE Alu 1 115 -18 12692 78 7 2 chr5 57716795 57718649 -145366883 + L1P LINE L1 2078 3940 -2206 15519 58 3 3 chr5 57718754 57721535 -145363997 + L1PA6 LINE L1 3358 6151 -3 1888 104 4 0 chr5 57721845 57722095 -145363437 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 57722096 57722236 -145363296 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 57722271 57722391 -145363141 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 57722911 57722952 -145362580 + MIR3 SINE MIR 120 160 -48 1058 133 5 92 chr5 57723010 57723228 -145362304 - MLT2B2 LTR ERVL -9 506 308 10436 72 9 0 chr5 57723335 57723708 -145361824 + L1PA6 LINE L1 3961 4329 -1825 2038 123 10 16 chr5 57723708 57724017 -145361515 + AluY SINE Alu 1 307 -4 10436 72 9 0 chr5 57724017 57725828 -145359704 + L1PA6 LINE L1 4329 6147 -7 604 274 98 14 chr5 57725912 57726281 -145359251 + L1MC4 LINE L1 7501 7900 -142 709 201 34 7 chr5 57726457 57726606 -145358926 - Charlie1a DNA MER1_type -1286 169 17 220 357 114 14 chr5 57726637 57726777 -145358755 + L3b LINE CR1 1294 1447 -136 227 114 0 0 chr5 57726927 57726962 -145358570 - L1MC5 LINE L1 -187 7774 7740 1106 142 30 0 chr5 57727101 57727270 -145358262 - FRAM SINE Alu -3 173 1 2108 117 3 19 chr5 57727399 57727706 -145357826 - AluSx SINE Alu -6 306 5 2197 119 10 3 chr5 57727735 57728038 -145357494 - AluSg SINE Alu -5 305 1 644 248 184 5 chr5 57729921 57730139 -145355393 - MIR SINE MIR 0 262 6 7171 51 2 1 chr5 57730244 57731832 -145353700 + L1PA6 LINE L1 4557 6153 -1 734 225 159 40 chr5 57731888 57732239 -145353293 + L1ME2 LINE L1 5753 6145 -19 924 176 112 45 chr5 57732294 57732607 -145352925 + MER46C DNA MER2_type 4 337 -1 260 319 17 76 chr5 57732700 57732762 -145352770 - MIR SINE MIR -126 136 83 2066 179 56 12 chr5 57732762 57733170 -145352362 - MSTB LTR MaLR 0 426 1 260 319 17 76 chr5 57733170 57733226 -145352306 - MIR SINE MIR -179 83 25 344 300 50 0 chr5 57733617 57733717 -145351815 + MER91C DNA MER1_type 36 140 0 1914 124 69 36 chr5 57735724 57736087 -145349445 + THE1C LTR MaLR 1 375 0 1672 178 54 12 chr5 57736168 57736500 -145349032 - MLT1B LTR MaLR -1 389 44 479 294 63 23 chr5 57736500 57736721 -145348811 + MIR SINE MIR 30 259 -3 347 322 164 21 chr5 57736844 57737173 -145348359 + L1MEd LINE L1 6 381 -5738 273 75 0 0 chr5 57737326 57737366 -145348166 + (CA)n Simple_repeat Simple_repeat 1 40 0 442 249 82 92 chr5 57737377 57737920 -145347612 + L1MEd LINE L1 676 1207 -4922 1944 150 3 0 chr5 57737920 57738207 -145347325 - AluSx SINE Alu -24 288 1 442 249 82 92 chr5 57738207 57738512 -145347020 + L1MEd LINE L1 1207 1514 -4615 6442 227 54 37 chr5 57739020 57741010 -145344522 + L1M3e LINE L1 1 1955 -5151 2299 107 0 0 chr5 57741010 57741308 -145344224 + AluSx SINE Alu 3 300 -12 6442 227 54 37 chr5 57741308 57743336 -145342196 + L1M3e LINE L1 1955 4745 -2361 1681 117 5 0 chr5 57743343 57743565 -145341967 + AluSx SINE Alu 3 225 -87 1184 203 0 5 chr5 57743565 57743787 -145341745 + L1M3e LINE L1 5043 5263 -1843 1215 190 23 16 chr5 57743791 57744049 -145341483 + L1MD3 LINE L1 7728 7987 -8 391 195 32 110 chr5 57745205 57745359 -145340173 + MIR SINE MIR 116 257 -5 397 219 130 24 chr5 57746380 57746503 -145339029 - LTR67 LTR ERVL -21 536 401 676 282 129 28 chr5 57746537 57746785 -145338747 - LTR67 LTR ERVL -280 277 5 2238 104 0 0 chr5 57748451 57748738 -145336794 - AluSq SINE Alu -26 287 1 345 43 85 0 chr5 57750635 57750682 -145334850 - MADE1 DNA Mariner 0 80 30 312 27 0 0 chr5 57751545 57751582 -145333950 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 279 0 38 chr5 57752125 57752204 -145333328 + CT-rich Low_complexity Low_complexity 1 76 0 21 0 0 0 chr5 57752975 57752996 -145332536 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 57753116 57753136 -145332396 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4350 131 7 47 chr5 57754205 57754925 -145330607 + LTR8 LTR ERV1 1 691 0 450 266 62 0 chr5 57755896 57756024 -145329508 - L2 LINE L2 0 3313 3178 309 326 56 75 chr5 57756153 57756444 -145329088 - L2 LINE L2 -356 2958 2676 7326 44 7 0 chr5 57756444 57757905 -145327627 + L1PA5 LINE L1 4689 6154 0 309 326 56 75 chr5 57757905 57758027 -145327505 - L2 LINE L2 -638 2676 2553 2208 112 27 0 chr5 57758329 57758625 -145326907 + AluSg SINE Alu 1 304 -6 2055 159 0 0 chr5 57759002 57759311 -145326221 + AluSx SINE Alu 1 309 -3 2043 142 0 3 chr5 57759410 57759706 -145325826 + AluJo SINE Alu 11 305 -7 1650 156 55 47 chr5 57760798 57761163 -145324369 + L1MB8 LINE L1 5811 6178 0 214 313 146 28 chr5 57761375 57761519 -145324013 + MIR SINE MIR 90 250 -12 981 304 139 5 chr5 57761539 57761927 -145323605 - MLT1K LTR MaLR 0 588 149 2278 98 56 34 chr5 57761945 57762301 -145323231 - THE1B LTR MaLR 0 364 1 189 0 0 0 chr5 57762931 57762952 -145322580 + (T)n Simple_repeat Simple_repeat 1 21 0 642 188 64 40 chr5 57763282 57763484 -145322048 + L2 LINE L2 3107 3313 0 1298 302 65 38 chr5 57765042 57765624 -145319908 - MLT1L LTR MaLR -17 598 1 2176 119 10 10 chr5 57765718 57766020 -145319512 + AluSx SINE Alu 1 302 -10 2924 10 0 0 chr5 57766130 57766440 -145319092 - AluY SINE Alu 0 311 2 233 287 129 30 chr5 57766538 57766639 -145318893 - L2 LINE L2 -9 3263 3153 21702 103 28 16 chr5 57767319 57770485 -145315047 + L1P LINE L1 11 3217 -2929 1217 90 0 11 chr5 57770485 57770694 -145314838 - L1PA4 LINE L1 0 6155 5981 21702 103 28 16 chr5 57770694 57770747 -145314785 + L1P LINE L1 3217 3268 -2878 * 23974 96 20 6 chr5 57770744 57773906 -145311626 + L1P LINE L1 7 3217 -2929 1235 85 0 11 chr5 57773906 57774115 -145311417 - L1PA4 LINE L1 0 6155 5981 23974 96 20 6 chr5 57774115 57774168 -145311364 + L1P LINE L1 3217 3268 -2878 * 30940 46 5 108 chr5 57774165 57778874 -145306658 + L1P LINE L1 7 4227 -1919 705 109 0 0 chr5 57778975 57779076 -145306456 + AluSg/x SINE Alu 206 306 -4 2073 126 7 0 chr5 57779076 57779369 -145306163 + AluSg SINE Alu 1 295 -15 308 153 119 0 chr5 57779370 57779429 -145306103 + Alu SINE Alu 236 301 -1 376 321 7 0 chr5 57779484 57779621 -145305911 + L2 LINE L2 2921 3058 -255 226 247 7 41 chr5 57779922 57780068 -145305464 + (CCA)n Simple_repeat Simple_repeat 3 143 0 304 150 13 39 chr5 57780196 57780436 -145305096 + AluJo SINE Alu 22 300 0 429 281 29 29 chr5 57780447 57780719 -145304813 - MLT1J2 LTR MaLR 0 450 125 339 222 17 103 chr5 57780759 57780876 -145304656 + AluJo SINE Alu 87 193 -109 289 161 97 0 chr5 57781290 57781352 -145304180 - L1M3 LINE L1 -458 5713 5646 473 136 0 0 chr5 57781365 57781446 -145304086 - L1MA8 LINE L1 -3 6288 6208 365 148 28 130 chr5 57781446 57781513 -145304019 - L1M3 LINE L1 -506 5677 5622 2096 120 0 11 chr5 57781513 57781822 -145303710 - AluSx SINE Alu 0 309 4 365 148 28 130 chr5 57781822 57781861 -145303671 - L1M3 LINE L1 -561 5622 5581 313 141 90 0 chr5 57782418 57782496 -145303036 - LTR7 LTR ERV1 -357 93 9 1749 121 0 4 chr5 57782497 57782745 -145302787 + AluSx SINE Alu 64 310 -2 2125 138 0 0 chr5 57782746 57783043 -145302489 + AluSq SINE Alu 1 297 -16 241 315 9 27 chr5 57783043 57783154 -145302378 + GA-rich Low_complexity Low_complexity 1 109 0 792 173 0 8 chr5 57783557 57783684 -145301848 - FLAM_C SINE Alu -7 126 1 644 289 40 16 chr5 57783919 57784172 -145301360 - MLT1L LTR MaLR -35 580 322 811 144 8 0 chr5 57784661 57784786 -145300746 - AluSg/x SINE Alu -53 257 132 380 176 27 75 chr5 57785253 57785440 -145300092 + (CACCC)n Simple_repeat Simple_repeat 1 178 0 378 286 98 25 chr5 57786473 57786676 -145298856 + L2 LINE L2 2848 3065 -248 2321 71 0 3 chr5 57786719 57787027 -145298505 - AluY SINE Alu -4 307 1 404 108 27 40 chr5 57787433 57787507 -145298025 + AluSc SINE Alu 219 291 -8 402 176 117 32 chr5 57787507 57787695 -145297837 - L1M3 LINE L1 -696 5473 5267 1029 164 56 17 chr5 57787701 57787932 -145297600 - L1M3 LINE L1 -846 5300 5061 2059 123 0 7 chr5 57787932 57788240 -145297292 - AluSx SINE Alu -6 306 1 309 164 0 0 chr5 57788272 57788345 -145297187 + CT-rich Low_complexity Low_complexity 2 74 0 197 298 0 0 chr5 57789082 57789129 -145296403 + L2 LINE L2 3261 3307 -6 1802 145 0 0 chr5 57793936 57794233 -145291299 - AluSx SINE Alu -15 297 1 775 106 28 43 chr5 57794242 57794383 -145291149 - FLAM_C SINE Alu 0 143 5 528 138 53 11 chr5 57794383 57794477 -145291055 - L1M4 LINE L1 -409 5765 5668 1750 87 0 12 chr5 57794639 57794892 -145290640 + AluSx SINE Alu 28 277 -35 227 65 0 0 chr5 57794892 57794923 -145290609 + Alu SINE Alu 251 281 -19 26 30 0 0 chr5 57794923 57794956 -145290576 + AT_rich Low_complexity Low_complexity 1 33 0 222 118 0 0 chr5 57794977 57795011 -145290521 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1002 171 11 6 chr5 57795011 57795192 -145290340 - AluSp SINE Alu -32 281 100 1021 136 171 26 chr5 57795293 57795521 -145290011 - MER44D DNA MER2_type -78 531 1 1639 64 18 0 chr5 57795756 57795976 -145289556 + AluY SINE Alu 1 224 -87 24107 98 13 19 chr5 57796661 57797328 -145288204 - L1P LINE L1 -2657 3489 2819 2348 90 0 0 chr5 57797328 57797638 -145287894 - AluY SINE Alu -1 310 1 24107 98 13 19 chr5 57797638 57800471 -145285061 - L1P LINE L1 -3327 2819 11 4691 204 80 6 chr5 57800481 57801650 -145283882 + L1M4 LINE L1 3651 4906 -1240 632 224 63 0 chr5 57801699 57801842 -145283690 - MLT1D LTR MaLR -351 154 3 1950 221 50 62 chr5 57801959 57802520 -145283012 - MLT2B3 LTR ERVL 0 554 1 2279 161 39 25 chr5 57802535 57802796 -145282736 - MER39 LTR ERV1 0 707 436 2218 98 0 3 chr5 57802796 57803103 -145282429 + AluSg SINE Alu 1 306 -4 2279 161 39 25 chr5 57803103 57803283 -145282249 - MER39 LTR ERV1 -271 436 260 252 244 44 56 chr5 57803269 57803359 -145282173 - LTR48B LTR ERV1 -555 89 1 * 1727 171 113 0 chr5 57803594 57803886 -145281646 - MER1B DNA MER1_type 0 339 15 2536 200 71 71 chr5 57804057 57804687 -145280845 + MER45B DNA AcHobo 1 630 -410 1434 224 71 19 chr5 57806279 57806658 -145278874 + MER45B DNA AcHobo 641 1039 -1 2320 132 44 10 chr5 57806832 57807240 -145278292 - L1MB2 LINE L1 0 6171 5750 2115 110 0 0 chr5 57807517 57807809 -145277723 - AluSx SINE Alu -20 292 1 207 256 64 77 chr5 57808129 57808207 -145277325 + MIR SINE MIR 13 89 -173 302 235 59 0 chr5 57808275 57808343 -145277189 - L2 LINE L2 0 3313 3242 235 266 63 38 chr5 57808379 57808458 -145277074 + MIR SINE MIR 40 120 -88 2188 92 26 0 chr5 57808507 57808810 -145276722 + AluY SINE Alu 1 311 0 268 355 91 16 chr5 57808821 57809063 -145276469 - MLT1I LTR MaLR -35 374 115 252 291 47 0 chr5 57809144 57809230 -145276302 + MIR3 SINE MIR 118 207 -1 2015 135 0 0 chr5 57809364 57809668 -145275864 - AluSq SINE Alu -9 304 1 1952 114 0 17 chr5 57809978 57810300 -145275232 - AluSg SINE Alu 0 317 1 2321 88 0 0 chr5 57810314 57810622 -145274910 - AluY SINE Alu -2 309 2 2376 84 3 0 chr5 57810752 57811061 -145274471 - AluSp SINE Alu -3 310 1 375 340 76 0 chr5 57811181 57811325 -145274207 - MIR SINE MIR -16 246 92 195 42 0 0 chr5 57813229 57813253 -145272279 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2284 70 0 17 chr5 57813554 57813854 -145271678 + AluSx SINE Alu 1 295 -17 316 286 110 49 chr5 57814250 57814495 -145271037 + MIR SINE MIR 3 262 0 1465 135 86 40 chr5 57815294 57815597 -145269935 - MER33 DNA MER1_type -7 317 1 598 246 59 32 chr5 57816332 57816552 -145268980 - Charlie2 DNA MER1_type -2625 237 12 549 221 17 93 chr5 57816907 57817079 -145268453 - MER5A DNA MER1_type -26 163 5 520 272 29 102 chr5 57817750 57817879 -145267653 - MIR SINE MIR -2 260 156 1829 128 14 17 chr5 57817879 57818168 -145267364 + AluSx SINE Alu 1 288 -24 520 272 29 102 chr5 57818168 57818284 -145267248 - MIR SINE MIR -106 156 33 4668 196 64 26 chr5 57818304 57818654 -145266878 - MER45B DNA AcHobo -541 1040 705 1997 131 10 0 chr5 57818654 57818960 -145266572 - AluSx SINE Alu -3 309 1 4668 196 64 26 chr5 57818960 57819578 -145265954 - MER45B DNA AcHobo -876 705 30 1853 133 58 36 chr5 57819578 57819908 -145265624 - MER1B DNA MER1_type 0 337 1 4668 196 64 26 chr5 57819908 57819940 -145265592 - MER45B DNA AcHobo -1551 30 1 2001 104 0 24 chr5 57820951 57821248 -145264284 + AluSg SINE Alu 7 296 -14 493 256 118 36 chr5 57821337 57821764 -145263768 + L1ME4a LINE L1 5412 5961 -160 2181 84 3 3 chr5 57821764 57822060 -145263472 + AluY SINE Alu 1 296 -15 493 256 118 36 chr5 57822060 57822226 -145263306 + L1ME4a LINE L1 5961 6112 -9 298 228 0 0 chr5 57822546 57822603 -145262929 + L2 LINE L2 3216 3272 0 768 308 44 16 chr5 57822852 57823102 -145262430 - MIR SINE MIR -1 261 5 500 228 144 25 chr5 57823195 57823475 -145262057 - L1ME LINE L1 -667 5495 5175 1979 207 57 67 chr5 57823598 57824283 -145261249 - L1MC5 LINE L1 -103 7858 7181 364 175 31 51 chr5 57824371 57824471 -145261061 + FLAM_A SINE Alu 38 126 -7 1989 97 32 29 chr5 57824487 57824797 -145260735 + AluY SINE Alu 1 311 0 2000 101 20 3 chr5 57824816 57825112 -145260420 + AluSg SINE Alu 5 305 -5 286 279 154 0 chr5 57826147 57826251 -145259281 + L2 LINE L2 3194 3313 0 2699 0 0 0 chr5 57826754 57827050 -145258482 + AluYa5 SINE Alu 1 296 -15 216 308 0 0 chr5 57829061 57829126 -145256406 + CT-rich Low_complexity Low_complexity 4 68 0 186 43 0 0 chr5 57829403 57829426 -145256106 + (T)n Simple_repeat Simple_repeat 1 23 0 192 97 0 0 chr5 57829999 57830030 -145255502 + (CCCA)n Simple_repeat Simple_repeat 1 31 0 181 212 0 0 chr5 57830335 57830368 -145255164 + L3 LINE CR1 265 297 -1280 31 26 0 0 chr5 57831319 57831357 -145254175 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 57831714 57831744 -145253788 + AT_rich Low_complexity Low_complexity 1 30 0 1612 189 0 19 chr5 57833907 57834225 -145251307 - AluJb SINE Alu 0 312 1 31 0 0 0 chr5 57834764 57834795 -145250737 + AT_rich Low_complexity Low_complexity 1 31 0 2043 126 3 3 chr5 57835452 57835754 -145249778 - AluSq SINE Alu -11 302 1 656 290 61 29 chr5 57836904 57837183 -145248349 - MER20B DNA MER1_type -495 288 1 1866 161 3 20 chr5 57838243 57838547 -145246985 - AluJo SINE Alu -13 299 1 630 236 23 51 chr5 57838777 57838967 -145246565 - MER63A DNA MER1_type -1478 210 24 2349 42 0 7 chr5 57838967 57839274 -145246258 + AluY SINE Alu 1 305 0 630 236 23 51 chr5 57839274 57839298 -145246234 - MER63A DNA MER1_type -1664 24 1 23 0 0 0 chr5 57840136 57840159 -145245373 + AT_rich Low_complexity Low_complexity 1 23 0 885 193 6 6 chr5 57840583 57840754 -145244778 + MER58B DNA MER1_type 171 341 0 2052 138 0 0 chr5 57841682 57841972 -145243560 - AluSx SINE Alu -22 290 1 2309 87 0 13 chr5 57842123 57842435 -145243097 - AluY SINE Alu -3 308 1 2691 179 45 0 chr5 57842730 57843262 -145242270 - L1MB7 LINE L1 -27 6157 5602 1748 203 38 118 chr5 57843257 57843451 -145242081 - L1MB7 LINE L1 -2214 3932 3724 * 2342 117 71 17 chr5 57843451 57843860 -145241672 - Tigger2a DNA MER2_type 0 434 4 1748 203 38 118 chr5 57843860 57844312 -145241220 - L1MB7 LINE L1 -2422 3724 3237 1740 157 0 29 chr5 57844312 57844592 -145240940 - AluJb SINE Alu -40 272 1 1748 203 38 118 chr5 57844592 57844703 -145240829 - L1MB7 LINE L1 -2909 3237 3260 2360 109 0 3 chr5 57844703 57845016 -145240516 + AluSx SINE Alu 1 312 0 1748 203 38 118 chr5 57845016 57845195 -145240337 - L1MB7 LINE L1 -2885 3261 3069 266 244 0 24 chr5 57845694 57845776 -145239756 - MLT1K LTR MaLR -20 568 489 21 36 0 0 chr5 57846011 57846039 -145239493 + AT_rich Low_complexity Low_complexity 1 28 0 220 278 56 0 chr5 57847480 57847552 -145237980 + L3b LINE CR1 1505 1580 -3 893 156 4 140 chr5 57848939 57849189 -145236343 + MER20 DNA MER1_type 4 219 0 405 240 96 7 chr5 57849487 57849633 -145235899 - L2 LINE L2 -43 3270 3112 23 0 0 0 chr5 57850342 57850365 -145235167 + AT_rich Low_complexity Low_complexity 1 23 0 2107 106 40 3 chr5 57850365 57850666 -145234866 - AluSq SINE Alu -1 312 1 23 0 0 0 chr5 57850916 57850939 -145234593 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 57851039 57851071 -145234461 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr5 57853095 57853123 -145232409 + (TA)n Simple_repeat Simple_repeat 2 29 0 2440 75 3 0 chr5 57853123 57853430 -145232102 - AluY SINE Alu -3 308 1 1008 130 160 30 chr5 57853671 57853902 -145231630 + MER44D DNA MER2_type 1 531 -78 1489 188 72 6 chr5 57853904 57854223 -145231309 - MER2 DNA MER2_type -5 340 1 448 176 0 0 chr5 57854226 57854300 -145231232 + MER44D DNA MER2_type 526 599 -6 21 36 0 0 chr5 57855025 57855053 -145230479 + AT_rich Low_complexity Low_complexity 1 28 0 2309 100 3 0 chr5 57855059 57855368 -145230164 + AluSp SINE Alu 1 310 -3 202 227 0 0 chr5 57855459 57855503 -145230029 + L2 LINE L2 3267 3310 -3 892 45 0 0 chr5 57856156 57856267 -145229265 + L1PA5 LINE L1 6040 6150 -4 504 0 0 0 chr5 57856268 57856324 -145229208 + (TA)n Simple_repeat Simple_repeat 1 56 0 273 209 0 0 chr5 57856997 57857064 -145228468 + CT-rich Low_complexity Low_complexity 1 67 0 1624 113 8 0 chr5 57857194 57857432 -145228100 - L1PB1 LINE L1 -4 6147 5908 628 143 31 0 chr5 57857676 57857774 -145227758 - U6 snRNA snRNA -6 101 1 439 246 18 9 chr5 57857798 57857912 -145227620 - MIR SINE MIR -58 204 90 641 259 84 40 chr5 57858417 57858668 -145226864 - L2 LINE L2 0 3313 3052 1598 196 3 13 chr5 57858668 57858969 -145226563 + AluJb SINE Alu 1 298 -14 736 244 5 80 chr5 57859142 57859355 -145226177 + MIR SINE MIR 33 229 -33 195 69 0 0 chr5 57859788 57859817 -145225715 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 170 38 38 chr5 57860099 57860152 -145225380 + CT-rich Low_complexity Low_complexity 5 57 0 2256 121 7 0 chr5 57860405 57860761 -145224771 - AluSx SINE Alu 0 358 1 209 343 169 23 chr5 57860913 57861085 -145224447 - L2 LINE L2 -1 3271 3075 1306 188 90 24 chr5 57861585 57861840 -145223692 - AluJo SINE Alu -40 272 1 978 134 32 48 chr5 57861979 57862166 -145223366 + L1PA15 LINE L1 5969 6152 -13 216 0 0 0 chr5 57863832 57863856 -145221676 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1693 155 4 25 chr5 57863856 57864134 -145221398 - AluJo SINE Alu -32 280 9 198 270 56 79 chr5 57865359 57865448 -145220084 - MIR SINE MIR -6 256 170 321 308 82 36 chr5 57865515 57865710 -145219822 + MIR SINE MIR 58 261 -1 815 136 0 16 chr5 57866177 57866302 -145219230 + FLAM_C SINE Alu 4 126 -17 342 0 0 0 chr5 57866302 57866340 -145219192 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 182 237 0 0 chr5 57866352 57866390 -145219142 - MIR SINE MIR -25 237 200 539 251 127 59 chr5 57866417 57866724 -145218808 + MLT1J2 LTR MaLR 39 366 -84 513 316 32 11 chr5 57866794 57866981 -145218551 - MIR SINE MIR -71 191 1 1678 124 4 0 chr5 57867188 57867441 -145218091 + AluSx SINE Alu 48 301 0 184 264 218 35 chr5 57867886 57867973 -145217559 - L2 LINE L2 -1 3271 3169 1266 59 0 0 chr5 57869365 57869542 -145215990 + AluY SINE Alu 132 308 0 474 244 195 18 chr5 57870114 57870278 -145215254 - MIR3 SINE MIR -15 193 1 1839 169 3 3 chr5 57870852 57871147 -145214385 - AluJb SINE Alu -17 295 1 1721 196 0 16 chr5 57871171 57871488 -145214044 + AluJo SINE Alu 1 312 0 255 61 0 0 chr5 57871637 57871670 -145213862 + (T)n Simple_repeat Simple_repeat 1 33 0 759 272 81 4 chr5 57871748 57872009 -145213523 - LTR33A LTR ERVL -18 505 225 251 279 23 12 chr5 57872136 57872222 -145213310 - LTR33 LTR ERVL -346 175 89 25 0 0 0 chr5 57872591 57872616 -145212916 + AT_rich Low_complexity Low_complexity 1 25 0 743 108 0 8 chr5 57872663 57872783 -145212749 - L1MB4 LINE L1 -1 6179 6061 724 272 34 34 chr5 57873483 57873718 -145211814 + MIR SINE MIR 28 262 0 34 55 0 0 chr5 57875754 57875809 -145209723 + AT_rich Low_complexity Low_complexity 1 55 0 2538 53 10 0 chr5 57879015 57879316 -145206216 + AluY SINE Alu 1 304 -7 196 302 0 0 chr5 57881179 57881222 -145204310 + L2 LINE L2 3247 3289 -24 1957 113 29 7 chr5 57881389 57881698 -145203834 - AluSx SINE Alu 0 315 1 512 296 62 11 chr5 57881925 57882101 -145203431 - MIR SINE MIR -72 190 6 245 308 0 15 chr5 57882139 57882204 -145203328 + MIR SINE MIR 35 98 -164 213 39 0 0 chr5 57882942 57882968 -145202564 + (CA)n Simple_repeat Simple_repeat 1 26 0 1460 172 55 17 chr5 57883114 57883404 -145202128 + MER7A DNA MER2_type 1 299 -47 189 107 0 0 chr5 57883488 57883516 -145202016 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 2067 118 3 56 chr5 57884195 57884516 -145201016 + AluSx SINE Alu 1 304 -8 2242 113 0 0 chr5 57885105 57885414 -145200118 + AluSc SINE Alu 1 309 0 261 0 0 0 chr5 57885563 57885592 -145199940 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2398 41 24 7 chr5 57885629 57885922 -145199610 - AluY SINE Alu -12 299 2 205 111 0 56 chr5 57887426 57887462 -145198070 + (TCCCC)n Simple_repeat Simple_repeat 3 36 0 1155 260 263 50 chr5 57887513 57888116 -145197416 - L2 LINE L2 -461 2853 2380 2332 69 0 3 chr5 57888116 57888422 -145197110 + AluSc SINE Alu 1 279 -30 1155 260 263 50 chr5 57888422 57889238 -145196294 - L2 LINE L2 -934 2380 1130 892 310 64 24 chr5 57889238 57889693 -145195839 - L2 LINE L2 -2426 888 416 1727 139 75 4 chr5 57889979 57890279 -145195253 + AluJb SINE Alu 1 319 0 289 306 0 0 chr5 57890430 57890502 -145195030 + L2 LINE L2 3182 3253 -19 353 287 104 0 chr5 57891462 57891577 -145193955 - MIR3 SINE MIR -1 207 81 386 321 55 20 chr5 57891594 57891796 -145193736 + MIR SINE MIR 13 219 -43 2048 146 13 0 chr5 57891822 57892130 -145193402 + AluSx SINE Alu 1 312 0 486 0 0 0 chr5 57892818 57892872 -145192660 + (TG)n Simple_repeat Simple_repeat 2 55 0 211 294 0 0 chr5 57894741 57894792 -145190740 + L2 LINE L2 3261 3311 -2 821 157 0 21 chr5 57895796 57895936 -145189596 + FLAM_C SINE Alu 1 137 -6 1397 178 68 25 chr5 57896598 57896919 -145188613 + MER58B DNA MER1_type 3 337 -4 290 206 10 78 chr5 57896930 57897032 -145188500 - MER5C DNA MER1_type 0 324 230 443 219 21 0 chr5 57897057 57897153 -145188379 - MER5C DNA MER1_type -200 124 27 243 0 0 0 chr5 57897498 57897525 -145188007 + (T)n Simple_repeat Simple_repeat 1 27 0 2271 102 10 0 chr5 57897637 57897942 -145187590 + AluSg1 SINE Alu 1 308 -1 383 313 42 12 chr5 57898793 57898981 -145186551 + MIR SINE MIR 17 211 -51 21 57 0 0 chr5 57899029 57899064 -145186468 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 57899745 57899767 -145185765 + AT_rich Low_complexity Low_complexity 1 22 0 183 360 10 20 chr5 57900289 57900389 -145185143 - MIR SINE MIR -15 247 149 208 225 0 0 chr5 57900710 57900750 -145184782 - L2 LINE L2 -5 3267 3228 23 0 0 0 chr5 57900978 57901001 -145184531 + AT_rich Low_complexity Low_complexity 1 23 0 372 318 7 0 chr5 57901155 57901309 -145184223 + L1M4 LINE L1 2 156 -6386 328 266 62 34 chr5 57901557 57901637 -145183895 + L1M4 LINE L1 485 561 -5981 195 42 0 0 chr5 57901637 57901661 -145183871 + (TTG)n Simple_repeat Simple_repeat 2 25 0 328 266 62 34 chr5 57901661 57901757 -145183775 + L1M4 LINE L1 561 666 -5876 4258 193 47 108 chr5 57901798 57903205 -145182327 + L1M4 LINE L1 816 2307 -4337 1713 191 46 3 chr5 57903205 57903488 -145182044 + AluJb SINE Alu 1 295 -17 4258 193 47 108 chr5 57903488 57903579 -145181953 + L1M4 LINE L1 2307 2402 -4242 1931 117 95 0 chr5 57903579 57903862 -145181670 + AluSq SINE Alu 1 310 -3 4258 193 47 108 chr5 57903862 57904836 -145180696 + L1M4 LINE L1 2402 3261 -3383 23 54 0 0 chr5 57904842 57904879 -145180653 + AT_rich Low_complexity Low_complexity 1 37 0 380 303 13 53 chr5 57905027 57905179 -145180353 - L2 LINE L2 -50 3263 3118 675 281 96 70 chr5 57905253 57905670 -145179862 + L2 LINE L2 2886 3313 0 366 256 0 12 chr5 57905671 57905757 -145179775 - L2 LINE L2 -1002 2312 2228 350 214 97 29 chr5 57906370 57906473 -145179059 - MIR3 SINE MIR -94 114 5 2034 112 7 0 chr5 57906903 57907172 -145178360 + AluSx SINE Alu 37 307 -5 734 308 63 8 chr5 57907480 57907854 -145177678 - L1MC4a LINE L1 -322 5799 5531 25 0 0 0 chr5 57908507 57908532 -145177000 + AT_rich Low_complexity Low_complexity 1 25 0 193 369 15 0 chr5 57908549 57908614 -145176918 + MIR SINE MIR 57 122 -140 2189 111 0 0 chr5 57909177 57909457 -145176075 + AluSq SINE Alu 1 280 -33 429 20 0 0 chr5 57909457 57909507 -145176025 + (CA)n Simple_repeat Simple_repeat 1 50 0 2272 53 7 11 chr5 57909993 57910310 -145175222 - AluY SINE Alu 0 316 1 286 357 10 0 chr5 57910350 57910448 -145175084 - L3 LINE CR1 -7 1570 1472 202 291 205 24 chr5 57910715 57910842 -145174690 - L3 LINE CR1 -218 1359 1210 3621 181 90 19 chr5 57911610 57912396 -145173136 + MER21B LTR ERV1 1 842 -21 304 307 76 31 chr5 57912425 57912650 -145172882 + L1ME LINE L1 5572 5806 -315 216 0 0 0 chr5 57914307 57914331 -145171201 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 1062 62 0 0 chr5 57914331 57914459 -145171073 - AluSg SINE Alu -182 128 1 2038 121 26 10 chr5 57914524 57914831 -145170701 + AluSx SINE Alu 1 312 0 336 119 0 0 chr5 57916115 57916174 -145169358 + (GA)n Simple_repeat Simple_repeat 2 60 0 23 54 0 0 chr5 57916736 57916773 -145168759 + AT_rich Low_complexity Low_complexity 1 37 0 652 200 17 17 chr5 57917588 57917768 -145167764 + L1MC5 LINE L1 7719 7898 -63 329 312 32 40 chr5 57918028 57918153 -145167379 + MIR SINE MIR 1 124 -138 1099 205 22 26 chr5 57918887 57918942 -145166590 + AluJb SINE Alu 84 138 -174 2473 82 0 0 chr5 57918942 57919245 -145166287 + AluSq SINE Alu 1 303 -10 1099 205 22 26 chr5 57919245 57919418 -145166114 + AluJb SINE Alu 138 311 -1 295 290 43 101 chr5 57921720 57921927 -145163605 - L2 LINE L2 -1 3271 3077 261 332 153 43 chr5 57921930 57922231 -145163301 - L2 LINE L2 -340 2974 2641 297 301 54 0 chr5 57922272 57922365 -145163167 - L2 LINE L2 -888 2426 2329 2528 40 10 0 chr5 57922726 57923026 -145162506 + AluY SINE Alu 1 303 -8 235 313 10 21 chr5 57923404 57923500 -145162032 + MIR SINE MIR 22 116 -92 805 164 0 8 chr5 57924152 57924286 -145161246 + AluJo SINE Alu 1 133 -169 259 311 189 0 chr5 57924651 57924783 -145160749 + L3 LINE CR1 987 1143 -434 1843 161 0 27 chr5 57924899 57925198 -145160334 + AluJo SINE Alu 1 291 -21 456 19 0 0 chr5 57925479 57925532 -145160000 + (TG)n Simple_repeat Simple_repeat 2 54 0 888 134 0 0 chr5 57925535 57925654 -145159878 - AluSq/x SINE Alu -194 119 1 255 314 49 10 chr5 57925926 57926028 -145159504 - MIR SINE MIR -33 229 124 1061 176 0 0 chr5 57926482 57926658 -145158874 + AluJo SINE Alu 135 310 -2 2142 132 0 13 chr5 57927264 57927575 -145157957 + AluSp SINE Alu 2 308 -5 6476 60 3 5 chr5 57927832 57928700 -145156832 - L1PA7 LINE L1 0 6154 5288 26 30 0 0 chr5 57928933 57928966 -145156566 + AT_rich Low_complexity Low_complexity 1 33 0 185 295 66 60 chr5 57929394 57929577 -145155955 - L3b LINE CR1 -12 1571 1388 187 208 113 0 chr5 57929873 57929926 -145155606 - L3b LINE CR1 -418 1165 1107 2687 151 10 18 chr5 57930932 57931435 -145154097 - L1MB3 LINE L1 0 6183 5685 400 304 89 12 chr5 57932089 57932257 -145153275 - MER5A DNA MER1_type -8 181 1 310 293 69 26 chr5 57932372 57932488 -145153044 - L2 LINE L2 -1 3271 3151 892 143 23 0 chr5 57933319 57933452 -145152080 + AluJ SINE Alu 1 136 -176 2247 80 0 3 chr5 57933471 57933801 -145151731 + AluY SINE Alu 1 329 0 956 192 0 23 chr5 57933803 57933980 -145151552 + AluJ SINE Alu 140 312 0 247 311 78 29 chr5 57934037 57934140 -145151392 + MIR SINE MIR 149 256 -6 344 227 93 21 chr5 57934607 57934704 -145150828 + MIR3 SINE MIR 86 189 -19 446 275 126 7 chr5 57934717 57934883 -145150649 + MIR SINE MIR 6 188 -62 270 56 0 0 chr5 57935227 57935263 -145150269 + (TG)n Simple_repeat Simple_repeat 2 37 0 1585 154 36 49 chr5 57935602 57935908 -145149624 + AluJb SINE Alu 1 302 -10 2409 99 0 0 chr5 57936910 57937212 -145148320 + AluSq SINE Alu 1 302 -11 2392 206 35 28 chr5 57937375 57937952 -145147580 - MER119 DNA MER1_type 0 583 3 2090 96 52 10 chr5 57938429 57938720 -145146812 + AluSp SINE Alu 1 303 -10 803 134 24 0 chr5 57938978 57939105 -145146427 + FLAM_C SINE Alu 1 130 -3 26 0 0 0 chr5 57940391 57940417 -145145115 + AT_rich Low_complexity Low_complexity 1 26 0 795 179 0 8 chr5 57940491 57940625 -145144907 - FLAM_C SINE Alu 0 133 1 2335 84 13 0 chr5 57940679 57940978 -145144554 + AluSg1 SINE Alu 1 303 -6 383 272 64 25 chr5 57941346 57941522 -145144010 - MER20B DNA MER1_type -25 194 1 2282 123 7 0 chr5 57941987 57942297 -145143235 + AluSx SINE Alu 1 312 0 199 283 19 0 chr5 57942572 57942625 -145142907 - MIR SINE MIR -59 149 96 192 245 20 0 chr5 57943194 57943243 -145142289 - MIR3 SINE MIR -2 206 157 365 313 140 7 chr5 57943680 57943830 -145141702 + MIR3 SINE MIR 36 205 -3 246 261 91 34 chr5 57944103 57944191 -145141341 - L2 LINE L2 -8 3264 3172 231 283 232 10 chr5 57944373 57944472 -145141060 - L2 LINE L2 -19 3253 3133 2254 112 0 6 chr5 57944957 57945269 -145140263 + AluSq SINE Alu 1 310 -3 2084 96 65 3 chr5 57945281 57945573 -145139959 + AluSp SINE Alu 1 310 -3 809 144 0 115 chr5 57946519 57946693 -145138839 + MER45 DNA AcHobo 1 154 -886 565 149 65 0 chr5 57946696 57946803 -145138729 + MER45 DNA AcHobo 1468 1581 0 233 323 19 81 chr5 57946872 57947033 -145138499 + L2 LINE L2 3159 3309 -4 498 17 0 0 chr5 57949309 57949368 -145136164 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 378 243 14 88 chr5 57949780 57949863 -145135669 - MIR SINE MIR -34 228 159 2484 67 0 10 chr5 57949863 57950163 -145135369 + AluSc SINE Alu 1 297 -12 378 243 14 88 chr5 57950163 57950227 -145135305 - MIR SINE MIR -103 159 92 243 61 0 0 chr5 57950426 57950459 -145135073 + (TG)n Simple_repeat Simple_repeat 2 34 0 196 329 122 0 chr5 57950522 57950604 -145134928 - MIR SINE MIR -14 248 157 803 173 0 0 chr5 57950675 57950802 -145134730 - FLAM_C SINE Alu -16 127 1 249 271 7 54 chr5 57950818 57950906 -145134626 - MIR SINE MIR -71 137 51 2090 112 0 83 chr5 57951090 57951232 -145134300 + AluSq SINE Alu 1 153 -160 2442 57 3 0 chr5 57951232 57951533 -145133999 + AluY SINE Alu 1 302 -9 2090 112 0 83 chr5 57951533 57951729 -145133803 + AluSq SINE Alu 153 311 -2 229 210 32 0 chr5 57951977 57952039 -145133493 + MER112 DNA MER1_type 8 71 -189 1733 76 5 5 chr5 57952459 57952682 -145132850 + AluSp SINE Alu 1 223 -90 279 399 30 20 chr5 57952842 57953045 -145132487 - L3 LINE CR1 -1342 235 31 27 29 0 0 chr5 57953133 57953167 -145132365 + AT_rich Low_complexity Low_complexity 1 34 0 892 135 7 7 chr5 57953175 57953316 -145132216 + AluSq/x SINE Alu 1 141 -172 373 271 55 17 chr5 57956029 57956210 -145129322 + MARNA DNA Mariner 125 312 -274 26 0 0 0 chr5 57956352 57956378 -145129154 + AT_rich Low_complexity Low_complexity 1 26 0 2226 52 42 3 chr5 57956380 57956668 -145128864 + AluY SINE Alu 1 299 -12 206 77 51 0 chr5 57957068 57957107 -145128425 + T-rich Low_complexity Low_complexity 2 42 0 2216 104 0 0 chr5 57957379 57957668 -145127864 + AluSc SINE Alu 1 289 -20 2298 107 3 0 chr5 57958168 57958468 -145127064 - AluSp SINE Alu -6 307 7 2047 92 70 0 chr5 57958475 57958748 -145126784 - AluSx SINE Alu -18 294 3 693 149 0 130 chr5 57958892 57958928 -145126604 + MER46A DNA MER2_type 2 41 -195 2166 193 65 104 chr5 57958928 57959685 -145125847 + LTR8A LTR ERV1 1 727 0 693 149 0 130 chr5 57959685 57959809 -145125723 + MER46A DNA MER2_type 41 141 -95 308 250 0 0 chr5 57959836 57959912 -145125620 + MER34 LTR ERV1 21 96 -446 1296 141 36 55 chr5 57959925 57960173 -145125359 + LTR29 LTR ERV1 145 425 -197 1887 117 0 19 chr5 57960173 57960437 -145125095 - AluSx SINE Alu -14 298 40 1296 141 36 55 chr5 57960437 57960632 -145124900 + LTR29 LTR ERV1 425 622 0 2247 106 10 6 chr5 57960661 57960972 -145124560 + AluSq SINE Alu 1 312 -1 482 134 0 12 chr5 57960994 57961076 -145124456 + Tigger4(Zombi) DNA MER2_type 2651 2731 0 547 201 326 21 chr5 57961380 57961659 -145123873 + MER34C LTR ERV1 1 364 -221 348 224 85 90 chr5 57961672 57961873 -145123659 + MER34 LTR ERV1 448 542 0 690 217 43 0 chr5 57962042 57962203 -145123329 + MER45A DNA AcHobo 4 171 -7 192 40 0 0 chr5 57963272 57963297 -145122235 + (CAA)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr5 57964711 57964755 -145120777 + AT_rich Low_complexity Low_complexity 1 44 0 4450 217 79 42 chr5 57965807 57966322 -145119210 + L1MDa LINE L1 564 1058 -5482 1979 112 17 27 chr5 57966322 57966618 -145118914 + AluSg SINE Alu 1 293 -17 4450 217 79 42 chr5 57966618 57966704 -145118828 + L1MDa LINE L1 1058 1139 -5401 2373 98 3 0 chr5 57966704 57967011 -145118521 + AluSp SINE Alu 1 308 -5 4450 217 79 42 chr5 57967011 57967887 -145117645 + L1MDa LINE L1 1139 2097 -4443 964 204 95 14 chr5 57967888 57968182 -145117350 + LTR48 LTR ERV1 1 318 -469 725 176 85 70 chr5 57968179 57968515 -145117017 + LTR48 LTR ERV1 239 785 -2 * 411 100 57 0 chr5 57968518 57968588 -145116944 + L1MDa LINE L1 2109 2182 -4358 650 203 55 0 chr5 57968598 57968780 -145116752 + L1MDa LINE L1 1283 1474 -5066 1122 194 32 16 chr5 57968780 57969094 -145116438 + L1MDa LINE L1 2204 2522 -4018 293 205 0 64 chr5 57969140 57969218 -145116314 + L1MD2 LINE L1 6071 6143 -216 2473 201 71 12 chr5 57969225 57969831 -145115701 + LTR48B LTR ERV1 2 643 -1 492 231 15 15 chr5 57969839 57969973 -145115559 + L1MD2 LINE L1 6210 6343 -16 180 0 0 0 chr5 57970938 57970958 -145114574 + (A)n Simple_repeat Simple_repeat 1 20 0 321 26 0 0 chr5 57971297 57971335 -145114197 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2065 154 0 3 chr5 57971914 57972220 -145113312 - AluJb SINE Alu -7 305 1 2269 98 0 16 chr5 57973563 57973869 -145111663 - AluY SINE Alu -8 303 3 21 0 0 0 chr5 57974156 57974177 -145111355 + AT_rich Low_complexity Low_complexity 1 21 0 1585 192 0 55 chr5 57974380 57974692 -145110840 + AluJo SINE Alu 1 295 -17 734 267 71 5 chr5 57974729 57974939 -145110593 + MIR SINE MIR 11 234 -28 624 27 0 0 chr5 57974957 57975031 -145110501 + (CCA)n Simple_repeat Simple_repeat 3 76 0 1742 192 0 10 chr5 57975227 57975362 -145110170 + AluJo SINE Alu 1 136 -176 2361 89 0 13 chr5 57975362 57975676 -145109856 + AluY SINE Alu 1 310 -1 1742 192 0 10 chr5 57975676 57975831 -145109701 + AluJo SINE Alu 136 288 -24 25 0 0 0 chr5 57975952 57975977 -145109555 + AT_rich Low_complexity Low_complexity 1 25 0 324 353 48 12 chr5 57976160 57976327 -145109205 - L2 LINE L2 -274 3039 2867 2288 118 0 3 chr5 57977872 57978185 -145107347 - AluSx SINE Alu 0 312 1 1931 106 58 4 chr5 57978696 57978971 -145106561 + AluSx SINE Alu 1 290 -22 2281 107 0 16 chr5 57979038 57979346 -145106186 + AluSg SINE Alu 1 303 -7 2423 66 0 0 chr5 57979473 57979762 -145105770 - AluY SINE Alu -21 290 2 1685 144 14 48 chr5 57980327 57980619 -145104913 - AluJo SINE Alu -30 282 1 21 36 0 0 chr5 57980770 57980798 -145104734 + AT_rich Low_complexity Low_complexity 1 28 0 1342 201 28 8 chr5 57981566 57981820 -145103712 + AluJo SINE Alu 44 302 -10 26 50 0 0 chr5 57982898 57982938 -145102594 + AT_rich Low_complexity Low_complexity 1 40 0 2303 94 3 10 chr5 57985169 57985477 -145100055 + AluSx SINE Alu 2 307 -5 470 294 80 67 chr5 57987177 57987551 -145097981 + L3 LINE CR1 904 1282 -295 2410 92 0 0 chr5 57987613 57987919 -145097613 - AluSg SINE Alu -4 306 1 241 339 53 32 chr5 57987933 57988122 -145097410 + L3 LINE CR1 1380 1572 -5 339 314 78 82 chr5 57988693 57989024 -145096508 + L2 LINE L2 2940 3269 -3 192 356 0 10 chr5 57989152 57989256 -145096276 - L2 LINE L2 -1022 2292 2190 907 171 78 39 chr5 57989463 57989668 -145095864 + AluJo SINE Alu 85 297 -15 2285 112 0 3 chr5 57989891 57990195 -145095337 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 57990284 57990305 -145095227 + AT_rich Low_complexity Low_complexity 1 21 0 2268 101 0 0 chr5 57991849 57992135 -145093397 + AluSx SINE Alu 1 286 -26 265 270 51 18 chr5 57992691 57992783 -145092749 - MIR SINE MIR -86 122 18 1640 186 19 22 chr5 57993642 57993959 -145091573 - 7SLRNA srpRNA srpRNA -4 316 1 208 70 47 0 chr5 57994016 57994059 -145091473 + (TA)n Simple_repeat Simple_repeat 2 46 0 2194 108 3 7 chr5 57994059 57994354 -145091178 - AluSx SINE Alu -18 294 1 1650 165 34 22 chr5 57994384 57994705 -145090827 + ERVL LTR ERVL 1892 2216 -3548 824 199 0 48 chr5 57994889 57995055 -145090477 - FRAM SINE Alu -18 158 1 1404 153 134 20 chr5 57995248 57995522 -145090010 - AluJb SINE Alu 0 303 1 298 152 0 0 chr5 57996699 57996745 -145088787 + L2 LINE L2 3262 3307 -6 438 273 52 91 chr5 57996777 57997008 -145088524 - MIR SINE MIR -6 256 35 9474 183 70 38 chr5 57997164 57998756 -145086776 + L1MC3 LINE L1 5318 7014 -771 484 233 23 39 chr5 57998756 57998920 -145086612 + FLAM_A SINE Alu 2 133 0 9474 183 70 38 chr5 57998920 57999711 -145085821 + L1MC3 LINE L1 7014 7778 -7 283 263 138 12 chr5 57999988 58000148 -145085384 + L1ME LINE L1 5685 5864 -298 2398 71 0 0 chr5 58000159 58000455 -145085077 + AluY SINE Alu 1 296 -15 1688 180 5 79 chr5 58000623 58001003 -145084529 - L1MB8 LINE L1 0 6178 5839 2473 94 0 0 chr5 58001003 58001311 -145084221 - AluSx SINE Alu -4 308 1 1688 180 5 79 chr5 58001311 58001395 -145084137 - L1MB8 LINE L1 -339 5839 5750 322 331 164 42 chr5 58001395 58001658 -145083874 + L2 LINE L2 2978 3272 0 384 263 140 34 chr5 58001739 58001918 -145083614 + MIR SINE MIR 24 221 -41 2140 115 14 0 chr5 58002000 58002295 -145083237 + AluSx SINE Alu 1 299 -13 249 301 27 14 chr5 58002296 58002369 -145083163 - MIR3 SINE MIR -49 159 86 390 350 38 16 chr5 58002379 58002565 -145082967 + MIR SINE MIR 3 192 -70 202 304 0 0 chr5 58002591 58002647 -145082885 + (CATA)n Simple_repeat Simple_repeat 1 56 0 1399 170 30 44 chr5 58003229 58003500 -145082032 + AluJb SINE Alu 12 278 -34 282 29 0 0 chr5 58003639 58003674 -145081858 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2180 100 0 0 chr5 58003675 58003956 -145081576 - AluSq SINE Alu -32 281 1 368 289 107 13 chr5 58004036 58004185 -145081347 - L2 LINE L2 -4 3309 3147 998 262 162 9 chr5 58004185 58004630 -145080902 - L2 LINE L2 -275 3038 2525 1572 101 135 116 chr5 58005650 58005805 -145079727 + THE1B LTR MaLR 1 151 -213 1893 114 14 21 chr5 58005805 58006118 -145079414 + AluSg SINE Alu 3 313 0 1572 101 135 116 chr5 58006118 58006316 -145079216 + THE1B LTR MaLR 151 362 -2 380 93 0 0 chr5 58006321 58006375 -145079157 + THE1B-int LTR MaLR 1 54 -1526 9550 93 1 11 chr5 58006375 58006978 -145078554 + THE1B-int LTR MaLR 257 864 -716 2057 119 36 3 chr5 58006978 58007280 -145078252 + AluSq SINE Alu 1 312 -1 9550 93 1 11 chr5 58007280 58008013 -145077519 + THE1B-int LTR MaLR 864 1580 0 1956 122 60 78 chr5 58008014 58008384 -145077148 + THE1B LTR MaLR 2 364 0 759 261 7 70 chr5 58010180 58010431 -145075101 + MIR SINE MIR 2 236 -26 622 251 164 19 chr5 58010431 58010638 -145074894 - MER8 DNA MER2_type -1 238 2 759 261 7 70 chr5 58010638 58010658 -145074874 + MIR SINE MIR 236 256 -6 852 186 74 103 chr5 58010952 58011034 -145074498 + MER33 DNA MER1_type 1 84 -2501 2127 92 7 7 chr5 58011034 58011360 -145074172 + AluSx SINE Alu 1 326 0 852 186 74 103 chr5 58011360 58011587 -145073945 + MER33 DNA MER1_type 84 302 -22 293 245 240 15 chr5 58011651 58011855 -145073677 - MIR SINE MIR -6 256 7 713 215 35 0 chr5 58012228 58012372 -145073160 + MER20 DNA MER1_type 16 164 -55 29 28 0 0 chr5 58012476 58012512 -145073020 + AT_rich Low_complexity Low_complexity 1 36 0 369 221 0 0 chr5 58013360 58013428 -145072104 + L2 LINE L2 3204 3271 -1 329 309 24 12 chr5 58013600 58013684 -145071848 + L2 LINE L2 3102 3186 -86 256 303 34 22 chr5 58013741 58013830 -145071702 - MIR SINE MIR -153 109 20 331 297 0 40 chr5 58014465 58014566 -145070966 + MIR SINE MIR 6 102 -160 23 0 0 0 chr5 58014737 58014760 -145070772 + AT_rich Low_complexity Low_complexity 1 23 0 1824 115 29 156 chr5 58014886 58014939 -145070593 + MSTC LTR MaLR 1 59 -369 2137 101 44 0 chr5 58014939 58015235 -145070297 + AluSq SINE Alu 1 309 -4 1824 115 29 156 chr5 58015235 58015292 -145070240 + MSTC LTR MaLR 59 122 -306 1993 114 0 81 chr5 58015292 58015625 -145069907 - AluSx SINE Alu -6 306 1 1824 115 29 156 chr5 58015625 58015759 -145069773 + MSTC LTR MaLR 122 271 -157 2483 48 0 7 chr5 58015759 58016054 -145069478 + AluY SINE Alu 1 293 -18 1824 115 29 156 chr5 58016054 58016209 -145069323 + MSTC LTR MaLR 271 444 16 1977 150 0 22 chr5 58016209 58016522 -145069010 + AluSx SINE Alu 1 306 -6 1824 115 29 156 chr5 58016522 58016537 -145068995 + MSTC LTR MaLR 444 351 -77 1958 160 0 3 chr5 58016537 58016837 -145068695 + AluJb SINE Alu 1 299 -13 1824 115 29 156 chr5 58016837 58016905 -145068627 + MSTC LTR MaLR 350 425 -3 2433 74 3 6 chr5 58017340 58017652 -145067880 + AluY SINE Alu 1 311 0 280 227 0 30 chr5 58019894 58019960 -145065572 + MIR SINE MIR 127 190 -72 2017 130 3 30 chr5 58021136 58021437 -145064095 - AluSx SINE Alu -19 293 1 2491 70 0 16 chr5 58021785 58022101 -145063431 + AluY SINE Alu 1 311 0 21 36 0 0 chr5 58024402 58024430 -145061102 + AT_rich Low_complexity Low_complexity 1 28 0 33 43 0 0 chr5 58024721 58024768 -145060764 + AT_rich Low_complexity Low_complexity 1 47 0 2012 118 0 4 chr5 58025338 58025618 -145059914 + AluSx SINE Alu 1 279 -33 471 18 0 0 chr5 58025618 58025674 -145059858 + (CA)n Simple_repeat Simple_repeat 1 56 0 842 247 50 36 chr5 58026525 58026804 -145058728 - MLT1A2 LTR MaLR -90 284 2 1955 140 25 25 chr5 58027095 58027459 -145058073 + THE1C LTR MaLR 1 364 -11 1950 131 4 0 chr5 58027460 58027727 -145057805 + AluSq SINE Alu 1 268 -45 225 154 0 0 chr5 58027731 58027770 -145057762 + GA-rich Low_complexity Low_complexity 3 41 0 229 190 0 35 chr5 58031067 58031125 -145054407 + MER5C DNA MER1_type 72 127 -197 2270 92 3 0 chr5 58031569 58031864 -145053668 - AluSp SINE Alu -17 296 1 2170 94 28 0 chr5 58032708 58032996 -145052536 + AluY SINE Alu 3 298 -13 2036 151 0 0 chr5 58033408 58033693 -145051839 - AluSx SINE Alu -27 285 1 241 315 126 9 chr5 58034375 58034486 -145051046 + L2 LINE L2 3144 3267 -5 466 283 19 82 chr5 58035065 58035493 -145050039 + L1ME3A LINE L1 3817 4217 -1929 1127 245 43 25 chr5 58035712 58036080 -145049452 + L1ME3A LINE L1 5563 5937 -233 211 120 20 40 chr5 58036369 58036419 -145049113 + GA-rich Low_complexity Low_complexity 3 51 0 234 0 0 0 chr5 58037765 58037791 -145047741 + (CA)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr5 58037791 58037814 -145047718 + (CCA)n Simple_repeat Simple_repeat 1 23 0 32 57 0 0 chr5 58039370 58039423 -145046109 + AT_rich Low_complexity Low_complexity 1 53 0 262 345 55 9 chr5 58040407 58040517 -145045015 + L2 LINE L2 3146 3260 -12 * 391 255 47 9 chr5 58040510 58040616 -145044916 - L2 LINE L2 0 3313 3204 40 67 0 0 chr5 58041581 58041656 -145043876 + AT_rich Low_complexity Low_complexity 1 75 0 198 363 12 64 chr5 58041725 58041896 -145043636 + MIR SINE MIR 75 236 -26 227 250 113 12 chr5 58042009 58042089 -145043443 + L2 LINE L2 3225 3312 -1 180 0 0 0 chr5 58042118 58042138 -145043394 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 2020 125 14 0 chr5 58042138 58042427 -145043105 - AluSx SINE Alu -19 293 1 1528 112 5 14 chr5 58042795 58043018 -145042514 + AluSc SINE Alu 44 264 -45 315 244 12 12 chr5 58045329 58045411 -145040121 - MIR SINE MIR -23 239 158 415 276 86 23 chr5 58045448 58045622 -145039910 - MIR SINE MIR -49 213 29 390 296 26 33 chr5 58045669 58045821 -145039711 + L1ME4a LINE L1 5596 5746 -424 244 256 83 30 chr5 58046066 58046199 -145039333 + L1ME4a LINE L1 5963 6102 -19 26 64 0 0 chr5 58047618 58047665 -145037867 + AT_rich Low_complexity Low_complexity 1 47 0 2120 136 3 0 chr5 58047698 58048008 -145037524 - AluSx SINE Alu -1 311 1 186 133 0 0 chr5 58048158 58048188 -145037344 + (TAA)n Simple_repeat Simple_repeat 3 32 0 21 57 0 0 chr5 58050234 58050269 -145035263 + AT_rich Low_complexity Low_complexity 1 35 0 231 103 0 0 chr5 58050732 58050771 -145034761 + (TAA)n Simple_repeat Simple_repeat 1 39 0 25 0 0 0 chr5 58051014 58051039 -145034493 + AT_rich Low_complexity Low_complexity 1 25 0 21 89 0 0 chr5 58051167 58051223 -145034309 + AT_rich Low_complexity Low_complexity 1 56 0 1780 137 0 0 chr5 58051275 58051537 -145033995 - AluSx SINE Alu -8 304 43 1736 178 39 0 chr5 58052125 58052456 -145033076 + MER2 DNA MER2_type 1 344 0 180 359 13 69 chr5 58052481 58052640 -145032892 - L2 LINE L2 -86 3186 3037 2520 108 11 0 chr5 58052665 58053016 -145032516 - THE1A LTR MaLR 0 355 1 21 57 0 0 chr5 58053727 58053762 -145031770 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 58054361 58054385 -145031147 + AT_rich Low_complexity Low_complexity 1 24 0 188 319 29 43 chr5 58057526 58057595 -145027937 - MIR SINE MIR -108 154 87 225 308 56 27 chr5 58057943 58058056 -145027476 - MIR SINE MIR -63 145 36 240 35 0 0 chr5 58059775 58059804 -145025728 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2427 79 0 19 chr5 58059812 58060130 -145025402 + AluSx SINE Alu 1 312 0 373 314 107 0 chr5 58060291 58060412 -145025120 - MIR3 SINE MIR -17 191 58 624 299 23 0 chr5 58060687 58060864 -145024668 - MER63A DNA MER1_type 0 210 30 568 189 53 53 chr5 58061022 58061154 -145024378 - FLAM_A SINE Alu 0 133 2 291 305 53 0 chr5 58061206 58061301 -145024231 - MIR SINE MIR -12 250 151 278 246 53 97 chr5 58061462 58061599 -145023933 - LTR33A LTR ERVL -2 521 394 1750 200 39 58 chr5 58061599 58062063 -145023469 - LTR16A1 LTR ERVL -2 455 1 278 246 53 97 chr5 58062063 58062132 -145023400 - LTR33A LTR ERVL -129 394 324 938 200 131 25 chr5 58062142 58062387 -145023145 + MER63 DNA MER1_type 12 282 -779 555 267 0 40 chr5 58062388 58062538 -145022994 - MIR SINE MIR -47 215 72 366 23 0 0 chr5 58063074 58063117 -145022415 + (CA)n Simple_repeat Simple_repeat 2 44 0 4357 181 103 14 chr5 58063221 58064234 -145021298 + Charlie1 DNA MER1_type 1566 2668 -93 745 262 129 19 chr5 58064903 58065166 -145020366 + MSTD LTR MaLR 66 357 -39 271 335 77 86 chr5 58065234 58065808 -145019724 + L2 LINE L2 2702 3272 0 561 289 134 26 chr5 58067400 58067632 -145017900 + MIR SINE MIR 6 262 0 21 0 0 0 chr5 58068407 58068428 -145017104 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 60 0 chr5 58068618 58068702 -145016830 + L2 LINE L2 3184 3272 0 2305 87 6 3 chr5 58068807 58069118 -145016414 - AluSq SINE Alu -1 312 1 23 33 0 0 chr5 58069532 58069562 -145015970 + AT_rich Low_complexity Low_complexity 1 30 0 849 242 48 104 chr5 58070569 58070775 -145014757 + MLT1E LTR MaLR 1 217 -376 249 57 0 0 chr5 58070775 58070810 -145014722 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 849 242 48 104 chr5 58070810 58070844 -145014688 + MLT1E LTR MaLR 217 251 -342 1658 70 0 0 chr5 58070844 58071043 -145014489 - AluSx SINE Alu -113 199 1 849 242 48 104 chr5 58071043 58071222 -145014310 + MLT1E LTR MaLR 251 397 -196 1176 183 9 5 chr5 58071222 58071446 -145014086 - L1M4 LINE L1 -359 5815 5591 355 197 15 0 chr5 58071448 58071514 -145014018 + MLT1E LTR MaLR 527 593 0 1115 227 189 0 chr5 58072241 58072527 -145013005 + MSTD LTR MaLR 1 340 -56 28 29 0 0 chr5 58072527 58072562 -145012970 + AT_rich Low_complexity Low_complexity 1 35 0 3547 30 16 0 chr5 58072562 58072990 -145012542 - L1PA3 LINE L1 -3 6152 5718 6361 19 0 0 chr5 58072990 58073735 -145011797 + L1P LINE L1 4253 4997 -1149 463 120 27 0 chr5 58073735 58073810 -145011722 + MSTD LTR MaLR 379 455 -2 410 294 8 56 chr5 58074187 58074313 -145011219 - L2 LINE L2 0 3272 3153 2164 106 3 7 chr5 58074413 58074714 -145010818 - AluSc SINE Alu -9 300 1 478 245 44 19 chr5 58075446 58075605 -145009927 - L1MC5 LINE L1 -138 7823 7661 1568 175 4 0 chr5 58075667 58075924 -145009608 + AluJo SINE Alu 1 258 -54 186 43 0 0 chr5 58075934 58075957 -145009575 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 27 73 0 0 chr5 58075960 58076015 -145009517 + AT_rich Low_complexity Low_complexity 1 55 0 263 273 0 0 chr5 58077382 58077437 -145008095 - L2 LINE L2 -16 3256 3202 1153 23 0 0 chr5 58077495 58077628 -145007904 + AluY SINE Alu 164 296 -15 25 83 0 0 chr5 58077988 58078048 -145007484 + AT_rich Low_complexity Low_complexity 1 60 0 28 48 0 0 chr5 58078234 58078276 -145007256 + AT_rich Low_complexity Low_complexity 1 42 0 2611 40 37 0 chr5 58078292 58078617 -145006915 - MER41A LTR ERV1 -88 466 130 239 343 67 0 chr5 58078709 58078843 -145006689 + L1ME LINE L1 5527 5669 -452 216 343 43 0 chr5 58079717 58079787 -145005745 + L3 LINE CR1 37 109 -1468 636 291 105 12 chr5 58079883 58080130 -145005402 + L3 LINE CR1 324 593 -984 201 348 18 79 chr5 58080200 58080281 -145005251 + L2 LINE L2 3104 3172 -100 2520 71 0 0 chr5 58080281 58080590 -145004942 - AluSc SINE Alu 0 309 1 201 348 18 79 chr5 58080590 58080672 -145004860 + L2 LINE L2 3172 3257 -15 1280 329 113 23 chr5 58080683 58081467 -145004065 + L3 LINE CR1 660 1514 -63 809 144 24 0 chr5 58083908 58084033 -145001499 + AluJ SINE Alu 3 130 -172 6125 141 16 4 chr5 58084041 58085377 -145000155 + L1PB3 LINE L1 4799 6149 -5 1118 167 6 0 chr5 58085378 58085558 -144999974 + AluJ SINE Alu 121 301 -11 474 61 0 0 chr5 58086117 58086183 -144999349 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 2318 200 56 56 chr5 58087236 58087865 -144997667 - L1ME1 LINE L1 -4 6162 5534 779 152 46 0 chr5 58088475 58088626 -144996906 - L1ME1 LINE L1 -999 5147 4990 281 319 111 20 chr5 58088733 58089284 -144996248 - L1M4 LINE L1 -3414 2732 2132 200 188 0 0 chr5 58089763 58089795 -144995737 + (TG)n Simple_repeat Simple_repeat 1 32 0 470 305 157 52 chr5 58089834 58090355 -144995177 - HAL1 LINE L1 -1106 1401 826 282 56 0 0 chr5 58091311 58091347 -144994185 + (TG)n Simple_repeat Simple_repeat 2 37 0 204 250 0 19 chr5 58091382 58091434 -144994098 + L2 LINE L2 3262 3312 -1 219 299 112 19 chr5 58092130 58092237 -144993295 - MIR3 SINE MIR -87 121 5 585 260 27 7 chr5 58095240 58095390 -144990142 - MIR SINE MIR -29 233 81 388 228 40 40 chr5 58095818 58095919 -144989613 + L2 LINE L2 3172 3272 0 2150 123 10 0 chr5 58096224 58096526 -144989006 + AluSx SINE Alu 5 309 -3 212 394 77 0 chr5 58097099 58097203 -144988329 + L2 LINE L2 3125 3236 -36 23 33 0 0 chr5 58097339 58097369 -144988163 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr5 58099527 58099548 -144985984 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2214 100 0 0 chr5 58100547 58100856 -144984676 + AluSc SINE Alu 1 309 0 384 103 0 0 chr5 58101387 58101445 -144984087 + (CA)n Simple_repeat Simple_repeat 1 58 0 868 246 83 4 chr5 58101933 58102161 -144983371 + MIR SINE MIR 1 246 -16 208 265 59 49 chr5 58102694 58102796 -144982736 + MIR SINE MIR 156 258 -4 2341 89 0 0 chr5 58103121 58103423 -144982109 - AluY SINE Alu -9 302 1 200 352 0 14 chr5 58103921 58103992 -144981540 + MIR SINE MIR 37 106 -102 2374 77 0 0 chr5 58104306 58104592 -144980940 + AluSg SINE Alu 2 287 -23 227 296 86 25 chr5 58105162 58105243 -144980289 + MIR3 SINE MIR 114 199 -9 26 64 0 0 chr5 58106770 58106817 -144978715 + AT_rich Low_complexity Low_complexity 1 47 0 272 357 67 9 chr5 58106862 58107072 -144978460 - L1ME LINE L1 -338 5783 5562 348 24 0 0 chr5 58107699 58107740 -144977792 + (CA)n Simple_repeat Simple_repeat 2 42 0 6488 231 55 21 chr5 58108518 58111341 -144974191 - L1MEc LINE L1 -1891 4324 1439 180 246 0 0 chr5 58111387 58111456 -144974076 + (TA)n Simple_repeat Simple_repeat 2 70 0 1402 246 41 22 chr5 58111456 58111829 -144973703 - MLT2D LTR ERVL -40 480 1 1485 188 52 11 chr5 58111924 58112074 -144973458 - AluJo SINE Alu -30 282 115 180 0 0 0 chr5 58112074 58112094 -144973438 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1485 188 52 11 chr5 58112094 58112214 -144973318 - AluJo SINE Alu -197 115 1 406 255 41 31 chr5 58112222 58112418 -144973114 - L1MEc LINE L1 -4878 1337 1140 2635 269 72 24 chr5 58112425 58113317 -144972215 - L1MEc LINE L1 -5426 970 36 194 296 53 53 chr5 58113531 58113683 -144971849 + L2 LINE L2 1806 1957 -1357 472 237 44 9 chr5 58113780 58113894 -144971638 + L2 LINE L2 3195 3312 -1 182 304 71 109 chr5 58115310 58115576 -144969956 - L2 LINE L2 0 3272 3017 415 228 123 0 chr5 58115664 58115778 -144969754 + MER46C DNA MER2_type 1 128 -210 418 367 88 22 chr5 58115808 58116260 -144969272 + L2 LINE L2 2403 2884 -430 231 250 58 0 chr5 58116541 58116593 -144968939 + L2 LINE L2 3235 3289 -24 868 166 131 30 chr5 58116795 58116994 -144968538 - MER20 DNA MER1_type 0 219 1 2220 218 54 75 chr5 58117747 58118507 -144967025 + L1MC4 LINE L1 7299 8042 0 1571 142 0 16 chr5 58118680 58118926 -144966606 + AluSq SINE Alu 72 313 0 357 309 150 33 chr5 58119226 58119911 -144965621 + L2 LINE L2 2456 3272 0 2337 113 0 0 chr5 58121036 58121346 -144964186 - AluSp SINE Alu -3 310 1 1887 161 10 0 chr5 58121356 58121661 -144963871 - AluSx SINE Alu -2 310 3 219 243 33 105 chr5 58121663 58121815 -144963717 + L2 LINE L2 2153 2293 -1021 520 221 233 0 chr5 58124683 58124846 -144960686 - MIR SINE MIR -49 213 13 189 311 68 0 chr5 58124849 58124923 -144960609 + L3 LINE CR1 1239 1317 -260 * 274 255 78 88 chr5 58124916 58125018 -144960514 - MIR SINE MIR -86 122 22 2206 118 7 0 chr5 58125443 58125748 -144959784 + AluSx SINE Alu 1 307 -5 715 202 0 0 chr5 58127357 58127486 -144958046 + AluJo SINE Alu 1 129 -173 14429 26 0 0 chr5 58127488 58129324 -144956208 - L1PA2 LINE L1 -635 5520 3685 5750 11 0 0 chr5 58129324 58129967 -144955565 + L1PA2 LINE L1 5509 6152 -3 1238 125 22 0 chr5 58129985 58130169 -144955363 + AluJo SINE Alu 121 308 -4 239 370 152 21 chr5 58130512 58130755 -144954777 + L2 LINE L2 2566 2840 -474 24 0 0 0 chr5 58130831 58130855 -144954677 + AT_rich Low_complexity Low_complexity 1 24 0 402 318 39 72 chr5 58130892 58131197 -144954335 + L2 LINE L2 2886 3180 -92 274 273 218 0 chr5 58131348 58131458 -144954074 + MIR SINE MIR 128 261 -1 232 246 15 15 chr5 58132721 58132786 -144952746 - LTR67 LTR ERVL -55 502 438 291 177 0 16 chr5 58134621 58134683 -144950849 - L1 LINE L1 -1879 4267 4207 * 4359 211 31 24 chr5 58134679 58135807 -144949725 + L1MB3 LINE L1 4302 5421 -762 2179 124 3 7 chr5 58135807 58136106 -144949426 + AluSx SINE Alu 1 298 -14 4359 211 31 24 chr5 58136106 58136135 -144949397 + L1MB3 LINE L1 5421 5448 -735 1337 189 96 32 chr5 58136135 58136478 -144949054 - MLT1A1 LTR MaLR 0 365 1 4359 211 31 24 chr5 58136478 58137195 -144948337 + L1MB3 LINE L1 5448 6183 0 2232 238 34 76 chr5 58137229 58137930 -144947602 + L2 LINE L2 2373 3052 -261 285 0 0 23 chr5 58137930 58137974 -144947558 + L1PA2 LINE L1 6112 6154 -1 2232 238 34 76 chr5 58137974 58138151 -144947381 + L2 LINE L2 3052 3235 -78 571 284 39 35 chr5 58138404 58138636 -144946896 - L2 LINE L2 -1231 2083 1851 248 284 118 83 chr5 58138692 58139041 -144946491 + L2 LINE L2 2185 2545 -769 2004 151 21 15 chr5 58139050 58139381 -144946151 + MER1B DNA MER1_type 1 333 -4 282 253 0 23 chr5 58139422 58139509 -144946023 + L2 LINE L2 3219 3303 -10 320 273 123 50 chr5 58141268 58141488 -144944044 - L1ME4a LINE L1 -2 6119 5884 499 206 53 23 chr5 58141504 58141635 -144943897 - MIR SINE MIR -106 156 22 252 244 64 0 chr5 58141735 58141813 -144943719 - L1ME4a LINE L1 -1979 5829 5747 187 347 21 69 chr5 58141840 58141984 -144943548 - MIR3 SINE MIR -5 203 67 353 258 80 129 chr5 58142018 58142282 -144943250 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 58142421 58142442 -144943090 + AT_rich Low_complexity Low_complexity 1 21 0 16007 29 5 0 chr5 58143330 58146005 -144939527 + L1PA3 LINE L1 3476 6155 0 203 133 0 50 chr5 58146009 58146069 -144939463 + (A)n Simple_repeat Simple_repeat 1 57 0 2440 140 69 4 chr5 58147060 58147511 -144938021 + MER31A LTR ERV1 6 485 0 1971 181 86 25 chr5 58147904 58148380 -144937152 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 58149280 58149301 -144936231 + AT_rich Low_complexity Low_complexity 1 21 0 1153 127 0 6 chr5 58150631 58150797 -144934735 - AluSq SINE Alu -12 301 137 411 314 103 22 chr5 58150866 58151089 -144934443 - MIR SINE MIR -20 242 2 327 321 122 0 chr5 58151973 58152104 -144933428 - L2 LINE L2 -1 3271 3125 276 358 29 58 chr5 58152230 58152473 -144933059 - L2 LINE L2 -189 3083 2848 2100 276 96 16 chr5 58153201 58154078 -144931454 + HAL1 LINE L1 10 956 -1551 216 200 0 0 chr5 58154081 58154126 -144931406 + (CA)n Simple_repeat Simple_repeat 2 46 0 433 209 117 67 chr5 58154132 58154414 -144931118 + HAL1 LINE L1 1384 1679 -828 1330 249 62 62 chr5 58154417 58155025 -144930507 + HAL1 LINE L1 1724 2334 -173 231 36 0 0 chr5 58155025 58155053 -144930479 + (GA)n Simple_repeat Simple_repeat 2 29 0 1330 249 62 62 chr5 58155053 58155228 -144930304 + HAL1 LINE L1 2333 2507 0 289 331 92 8 chr5 58156464 58156594 -144928938 - MIR3 SINE MIR -18 190 50 2359 95 0 3 chr5 58157164 58157468 -144928064 - AluSq SINE Alu -10 303 1 742 195 166 0 chr5 58157746 58157915 -144927617 - MER58A DNA MER1_type -23 201 5 291 210 294 0 chr5 58158231 58158350 -144927182 - MLT1L LTR MaLR -458 157 4 431 293 67 7 chr5 58158544 58158694 -144926838 + MIR3 SINE MIR 37 195 -13 278 164 0 16 chr5 58159765 58159826 -144925706 + GA-rich Low_complexity Low_complexity 3 62 0 22 0 0 0 chr5 58160449 58160471 -144925061 + AT_rich Low_complexity Low_complexity 1 22 0 198 257 27 68 chr5 58160760 58160834 -144924698 + L2 LINE L2 427 497 -2817 180 0 0 0 chr5 58162331 58162351 -144923181 + (CA)n Simple_repeat Simple_repeat 2 21 0 23 33 0 0 chr5 58164609 58164639 -144920893 + AT_rich Low_complexity Low_complexity 1 30 0 227 226 19 0 chr5 58167251 58167304 -144918228 + (CATA)n Simple_repeat Simple_repeat 2 55 0 417 39 0 0 chr5 58167515 58167566 -144917966 + (CA)n Simple_repeat Simple_repeat 2 52 0 1643 125 16 16 chr5 58168515 58168771 -144916761 - AluSg SINE Alu -9 301 46 23 54 0 0 chr5 58168907 58168944 -144916588 + AT_rich Low_complexity Low_complexity 1 37 0 455 329 114 14 chr5 58170644 58170863 -144914669 + MIR SINE MIR 12 252 -10 2180 110 41 39 chr5 58172474 58172837 -144912695 + THE1B LTR MaLR 1 364 0 283 315 129 6 chr5 58173075 58173253 -144912279 - MIR SINE MIR -51 211 12 2172 90 17 0 chr5 58175778 58176103 -144909429 + AluSg SINE Alu 15 344 0 225 250 28 42 chr5 58176592 58176664 -144908868 - MIR SINE MIR -111 151 81 183 204 0 0 chr5 58176705 58176749 -144908783 + CT-rich Low_complexity Low_complexity 1 44 0 262 313 171 45 chr5 58176754 58177240 -144908292 + L2 LINE L2 2259 2805 -509 1255 191 67 54 chr5 58177273 58177644 -144907888 - MLT1B LTR MaLR -11 379 4 343 290 15 46 chr5 58177935 58178066 -144907466 + L2 LINE L2 3180 3306 -7 4905 171 150 6 chr5 58178583 58179693 -144905839 + Charlie1 DNA MER1_type 1 950 -1811 1962 113 34 0 chr5 58179693 58179985 -144905547 - AluSx SINE Alu -10 302 1 4905 171 150 6 chr5 58179985 58180137 -144905395 + Charlie1 DNA MER1_type 950 2752 -9 23 54 0 0 chr5 58180556 58180593 -144904939 + AT_rich Low_complexity Low_complexity 1 37 0 188 133 0 0 chr5 58181099 58181129 -144904403 - L2 LINE L2 -587 2727 2698 1836 130 72 0 chr5 58181190 58181466 -144904066 - AluJb SINE Alu -16 296 1 372 22 0 0 chr5 58182096 58182141 -144903391 + (CA)n Simple_repeat Simple_repeat 2 46 0 422 258 148 0 chr5 58182554 58182682 -144902850 + MLT1J LTR MaLR 45 191 -320 2612 94 0 27 chr5 58182720 58183094 -144902438 + THE1B LTR MaLR 1 364 0 26 30 0 0 chr5 58183704 58183737 -144901795 + AT_rich Low_complexity Low_complexity 1 33 0 252 266 120 82 chr5 58184606 58184764 -144900768 - MIR SINE MIR -70 192 29 1074 285 115 7 chr5 58185188 58185605 -144899927 + MLT1J LTR MaLR 1 462 -49 2673 30 0 0 chr5 58185640 58185941 -144899591 + AluY SINE Alu 1 301 -10 21 57 0 0 chr5 58186020 58186055 -144899477 + AT_rich Low_complexity Low_complexity 1 35 0 228 239 0 0 chr5 58186295 58186341 -144899191 + L2 LINE L2 3188 3233 -39 983 164 94 20 chr5 58186460 58186661 -144898871 + MER46A DNA MER2_type 17 232 -4 234 91 0 0 chr5 58187849 58187882 -144897650 + (CA)n Simple_repeat Simple_repeat 2 34 0 838 296 35 49 chr5 58188031 58188483 -144897049 + MLT1K LTR MaLR 43 488 -100 248 170 38 0 chr5 58189402 58189455 -144896077 - Charlie8 DNA MER1_type -2264 153 99 329 291 69 79 chr5 58189627 58189830 -144895702 + MIR3 SINE MIR 5 205 -3 44 46 0 0 chr5 58190566 58190631 -144894901 + AT_rich Low_complexity Low_complexity 1 65 0 275 277 34 113 chr5 58191145 58191287 -144894245 + MIR3 SINE MIR 23 150 -58 2158 125 3 0 chr5 58191287 58191582 -144893950 - AluSq SINE Alu -17 296 1 275 277 34 113 chr5 58191582 58191616 -144893916 + MIR3 SINE MIR 150 185 -23 392 330 68 40 chr5 58192047 58192401 -144893131 + L2 LINE L2 2230 2593 -721 558 155 77 52 chr5 58192467 58192489 -144893043 + MER106B DNA MER1_type 900 920 -139 447 19 0 0 chr5 58192489 58192541 -144892991 + (CA)n Simple_repeat Simple_repeat 1 52 0 558 155 77 52 chr5 58192541 58192673 -144892859 + MER106B DNA MER1_type 920 1058 -1 28 29 0 0 chr5 58193541 58193576 -144891956 + AT_rich Low_complexity Low_complexity 1 35 0 499 210 34 8 chr5 58193811 58193930 -144891602 + MLT1A2 LTR MaLR 1 122 -252 870 236 114 67 chr5 58193933 58194435 -144891097 + L2 LINE L2 2758 3309 -4 876 158 0 0 chr5 58194615 58194748 -144890784 + FLAM_C SINE Alu 1 133 0 180 0 0 0 chr5 58195367 58195387 -144890145 + (A)n Simple_repeat Simple_repeat 1 20 0 2387 151 39 10 chr5 58195645 58196061 -144889471 - MSTA LTR MaLR 0 428 1 231 296 170 30 chr5 58197291 58197426 -144888106 + MER5A DNA MER1_type 25 189 0 717 206 40 23 chr5 58197483 58197658 -144887874 + MER5B DNA MER1_type 1 178 0 752 222 106 59 chr5 58198307 58198415 -144887117 - LTR56 LTR ERV1 0 445 344 1892 145 10 10 chr5 58198415 58198719 -144886813 - AluJb SINE Alu -8 304 1 752 222 106 59 chr5 58198719 58199015 -144886517 - LTR56 LTR ERV1 -101 344 22 1919 152 7 0 chr5 58199288 58199584 -144885948 - AluJb SINE Alu -14 298 1 254 229 0 0 chr5 58200315 58200363 -144885169 + L2 LINE L2 3246 3293 -20 232 200 0 80 chr5 58201191 58201266 -144884266 + L1ME LINE L1 5483 5551 -570 1022 165 10 5 chr5 58201268 58201462 -144884070 + MER46B DNA MER2_type 1 70 -166 5511 196 58 31 chr5 58201467 58203036 -144882496 + L1 LINE L1 2841 4452 -1694 1484 165 38 38 chr5 58203741 58204032 -144881500 + AluJb SINE Alu 1 291 -21 192 241 0 0 chr5 58204920 58204978 -144880554 + (CA)n Simple_repeat Simple_repeat 1 58 0 203 221 132 15 chr5 58206467 58206535 -144878997 - MIR3 SINE MIR -52 156 81 194 328 0 16 chr5 58207146 58207207 -144878325 + L2 LINE L2 3249 3308 -5 228 284 25 25 chr5 58207319 58207400 -144878132 - MIR3 SINE MIR -27 181 101 208 358 106 16 chr5 58207977 58208100 -144877432 - MIR3 SINE MIR -22 186 53 334 315 0 0 chr5 58209359 58209448 -144876084 - L2 LINE L2 0 3313 3225 330 243 88 82 chr5 58209503 58209820 -144875712 + L2 LINE L2 2313 2631 -683 1808 243 66 30 chr5 58209828 58210745 -144874787 + L2 LINE L2 2363 3312 -1 685 264 98 0 chr5 58211535 58211709 -144873823 - MIR SINE MIR 0 262 72 237 290 70 10 chr5 58212673 58212773 -144872759 - MER5A DNA MER1_type -5 184 79 * 310 276 38 19 chr5 58212688 58212777 -144872755 + MER5A DNA MER1_type 35 128 -61 2151 133 0 0 chr5 58212777 58213086 -144872446 - AluY SINE Alu -2 309 1 310 276 38 19 chr5 58213086 58213101 -144872431 + MER5A DNA MER1_type 128 141 -48 331 247 132 32 chr5 58213165 58213355 -144872177 - Charlie2 DNA MER1_type -56 2806 2598 7638 41 2 0 chr5 58213355 58214351 -144871181 - L1P LINE L1 -4188 1958 961 4613 37 0 0 chr5 58214338 58214947 -144870585 + L1PA3 LINE L1 5564 6172 0 * 1755 209 111 28 chr5 58214947 58215328 -144870204 - Charlie2 DNA MER1_type -257 2605 2257 2208 96 0 16 chr5 58215328 58215640 -144869892 - AluSg SINE Alu -3 307 1 1755 209 111 28 chr5 58215640 58215950 -144869582 - Charlie2 DNA MER1_type -605 2257 1856 513 247 51 32 chr5 58215941 58216099 -144869433 - Charlie2 DNA MER1_type -2452 330 170 * 566 199 46 8 chr5 58216231 58216362 -144869170 - L2 LINE L2 0 3313 3178 2403 198 12 16 chr5 58216455 58216956 -144868576 + MLT2B3 LTR ERVL 10 508 -46 1528 177 43 22 chr5 58216976 58217298 -144868234 + MER2 DNA MER2_type 1 329 -16 369 0 0 0 chr5 58217601 58217642 -144867890 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1503 200 0 37 chr5 58217648 58217948 -144867584 - AluJo SINE Alu -23 289 1 1079 213 8 4 chr5 58218988 58219223 -144866309 + L1MC4 LINE L1 7380 7615 -427 481 268 30 54 chr5 58219322 58219490 -144866042 + MIR SINE MIR 92 255 -7 186 340 60 30 chr5 58219523 58219623 -144865909 - L2 LINE L2 -54 3218 3116 2112 119 11 0 chr5 58220312 58220597 -144864935 + AluSg SINE Alu 1 288 -22 549 303 100 18 chr5 58220971 58221311 -144864221 + MLT1J LTR MaLR 1 368 -143 28 0 0 0 chr5 58221350 58221378 -144864154 + AT_rich Low_complexity Low_complexity 1 28 0 2042 69 4 36 chr5 58221378 58221652 -144863880 - AluY SINE Alu -10 301 37 546 163 184 0 chr5 58221652 58221750 -144863782 - FLAM_A SINE Alu -17 116 1 2241 188 58 2 chr5 58222295 58222743 -144862789 + MLT1D LTR MaLR 25 497 -8 224 250 0 24 chr5 58222824 58222908 -144862624 + (TAA)n Simple_repeat Simple_repeat 2 83 0 2542 53 0 3 chr5 58223165 58223468 -144862064 + AluY SINE Alu 1 302 -9 1652 161 11 35 chr5 58224978 58225325 -144860207 - MLT1A2 LTR MaLR -18 356 18 188 338 84 0 chr5 58225422 58225493 -144860039 - L2 LINE L2 -23 3249 3173 844 324 52 18 chr5 58225553 58225992 -144859540 + LTR16B LTR ERVL 1 454 -10 313 298 39 48 chr5 58226201 58226305 -144859227 - L2 LINE L2 -14 3258 3156 2199 84 46 0 chr5 58226838 58227122 -144858410 - AluSq SINE Alu -16 297 1 908 171 83 34 chr5 58227170 58227375 -144858157 - MER20 DNA MER1_type -4 215 1 1032 252 50 48 chr5 58227454 58227910 -144857622 - L1ME3A LINE L1 -219 5951 5495 529 236 140 78 chr5 58229469 58229805 -144855727 + MLT1J LTR MaLR 88 454 -57 1843 173 0 3 chr5 58229805 58230100 -144855432 - AluJb SINE Alu -18 294 1 529 236 140 78 chr5 58230100 58230162 -144855370 + MLT1J LTR MaLR 454 511 0 28 0 0 0 chr5 58230635 58230663 -144854869 + AT_rich Low_complexity Low_complexity 1 28 0 222 288 45 147 chr5 58232544 58232562 -144852970 - L2 LINE L2 -12 3260 3242 1888 137 0 42 chr5 58232562 58232875 -144852657 - AluJb SINE Alu -12 300 1 222 288 45 147 chr5 58232875 58233210 -144852322 - L2 LINE L2 -30 3242 2943 612 254 102 19 chr5 58233907 58234112 -144851420 + MLT1J LTR MaLR 100 321 -190 646 204 130 28 chr5 58234879 58235095 -144850437 - L2 LINE L2 -1 3312 3075 744 229 13 0 chr5 58235335 58235488 -144850044 + MIR SINE MIR 41 195 -67 2193 103 0 17 chr5 58236000 58236300 -144849232 - AluSc SINE Alu -13 296 2 30 27 0 0 chr5 58236307 58236344 -144849188 + AT_rich Low_complexity Low_complexity 1 37 0 1094 196 30 1 chr5 58236962 58237252 -144848280 + MER2 DNA MER2_type 9 344 -1 318 373 40 13 chr5 58237350 58237575 -144847957 + L2 LINE L2 2585 2815 -499 22 0 0 0 chr5 58239034 58239056 -144846476 + AT_rich Low_complexity Low_complexity 1 22 0 387 261 193 80 chr5 58239264 58239513 -144846019 - L3 LINE CR1 -2 1575 1299 1821 83 63 4 chr5 58239524 58239776 -144845756 - AluSx SINE Alu -11 301 35 600 289 6 0 chr5 58239897 58240053 -144845479 + MER58A DNA MER1_type 1 157 0 188 267 0 0 chr5 58240132 58240177 -144845355 + L2 LINE L2 3263 3307 -6 451 235 255 50 chr5 58241979 58242179 -144843353 - MIR SINE MIR -11 251 11 208 207 86 35 chr5 58242196 58242254 -144843278 - L2 LINE L2 -9 3263 3203 438 254 8 39 chr5 58242357 58242487 -144843045 - MER91A DNA MER1_type -70 126 1 2378 47 4 0 chr5 58243483 58243761 -144841771 - AluY SINE Alu -17 294 16 463 284 120 24 chr5 58244235 58244576 -144840956 + L2 LINE L2 1721 2094 -1220 1811 162 9 19 chr5 58244582 58244897 -144840635 - AluJb SINE Alu 0 312 1 335 301 162 9 chr5 58245054 58245278 -144840254 + MIR SINE MIR 8 260 -2 2278 99 7 3 chr5 58245280 58245582 -144839950 - AluSc SINE Alu -6 303 1 256 325 115 13 chr5 58245607 58245764 -144839768 + L2 LINE L2 2253 2425 -889 872 323 114 28 chr5 58245793 58246294 -144839238 + MLT1H1 LTR MaLR 12 555 0 450 307 88 13 chr5 58246295 58246533 -144838999 + L2 LINE L2 2435 2690 -624 363 335 103 70 chr5 58246586 58246944 -144838588 + L2 LINE L2 2828 3197 -75 382 338 49 20 chr5 58247983 58248187 -144837345 + MIR SINE MIR 25 234 -28 214 305 17 0 chr5 58248187 58248246 -144837286 - L2 LINE L2 -31 3241 3182 392 206 122 144 chr5 58248310 58248490 -144837042 - MER45A DNA AcHobo -2 176 1 1791 141 45 4 chr5 58248935 58249204 -144836328 + AluSx SINE Alu 1 280 -32 493 126 58 0 chr5 58249289 58249432 -144836100 + AluJ/FRAM SINE Alu 216 363 0 273 119 0 0 chr5 58249426 58249468 -144836064 + (GGGGA)n Simple_repeat Simple_repeat 5 46 0 * 365 187 30 12 chr5 58249926 58250069 -144835463 + MIR SINE MIR 47 252 -10 1647 80 0 0 chr5 58250913 58251112 -144834420 + AluSq SINE Alu 1 199 -114 345 148 0 0 chr5 58251113 58251174 -144834358 + AluSq SINE Alu 241 301 -2 1949 127 14 83 chr5 58251195 58251558 -144833974 - MER44D DNA MER2_type 0 609 2 236 211 0 0 chr5 58251837 58251889 -144833643 + L2 LINE L2 3262 3313 0 2203 104 17 0 chr5 58252087 58252386 -144833146 - AluSx SINE Alu -8 304 1 204 245 38 19 chr5 58252567 58252620 -144832912 - L3 LINE CR1 -8 1569 1516 21 0 0 0 chr5 58253668 58253689 -144831843 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 58254085 58254113 -144831419 + AT_rich Low_complexity Low_complexity 1 28 0 1527 151 4 11 chr5 58257829 58258094 -144827438 - AluJb SINE Alu -17 295 33 2535 104 45 22 chr5 58259171 58259527 -144826005 + THE1B LTR MaLR 1 364 0 313 224 112 0 chr5 58259886 58259993 -144825539 - L1ME LINE L1 -397 5724 5606 2403 81 3 13 chr5 58259994 58260302 -144825230 - AluSc SINE Alu -4 305 1 316 267 338 9 chr5 58262800 58263010 -144822522 - L2 LINE L2 0 3313 3035 644 198 0 0 chr5 58263027 58263133 -144822399 + MER3 DNA MER1_type 8 113 -96 583 276 76 49 chr5 58263182 58263486 -144822046 + HAL1 LINE L1 3 314 -2193 909 283 122 28 chr5 58263544 58263912 -144821620 + L1M4 LINE L1 3540 3872 -2274 2210 167 21 21 chr5 58263912 58264301 -144821231 - MLT1B LTR MaLR -1 389 1 909 283 122 28 chr5 58264301 58264658 -144820874 + L1M4 LINE L1 3872 4350 -1796 389 209 114 0 chr5 58264753 58264858 -144820674 + L1M4 LINE L1 4475 4591 -1555 799 220 81 30 chr5 58264998 58265234 -144820298 + MIR SINE MIR 9 256 -6 276 343 108 16 chr5 58265807 58266186 -144819346 - L1ME LINE L1 -960 5186 4773 198 0 0 0 chr5 58266559 58266581 -144818951 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1475 157 134 0 chr5 58266584 58266845 -144818687 - AluJo SINE Alu -16 296 1 532 206 76 60 chr5 58267682 58267866 -144817666 + MIR SINE MIR 2 188 -74 2201 117 10 0 chr5 58267875 58268175 -144817357 + AluSx SINE Alu 1 303 -9 595 285 87 50 chr5 58270818 58271060 -144814472 + MIR SINE MIR 2 252 -10 963 285 58 17 chr5 58272540 58272901 -144812631 + LTR33 LTR ERVL 135 510 -11 1065 316 80 29 chr5 58273206 58273624 -144811908 - MLT2F LTR ERVL -44 619 165 2329 89 7 3 chr5 58273624 58273927 -144811605 - AluSx SINE Alu -8 304 1 1065 316 80 29 chr5 58273927 58274058 -144811474 - MLT2F LTR ERVL -498 165 42 6971 251 57 23 chr5 58274199 58274467 -144811065 - ERVL-F LTR ERVL -332 5432 5174 1938 221 28 32 chr5 58274467 58274757 -144810775 - MLT1C LTR MaLR -2 465 176 2138 149 0 0 chr5 58274757 58275066 -144810466 - AluSx SINE Alu -3 309 1 1938 221 28 32 chr5 58275066 58275242 -144810290 - MLT1C LTR MaLR -291 176 1 6971 251 57 23 chr5 58275242 58276816 -144808716 - ERVL-F LTR ERVL -590 5174 3528 9221 225 61 29 chr5 58279533 58284508 -144801024 + L1M2 LINE L1 1019 6260 -948 1958 145 0 0 chr5 58284815 58285125 -144800407 - AluSx SINE Alu 0 310 1 589 133 22 0 chr5 58285276 58285366 -144800166 - L1MB4 LINE L1 -34 6146 6055 237 300 200 21 chr5 58285814 58285954 -144799578 - MIR3 SINE MIR -14 194 30 704 230 140 31 chr5 58286665 58286887 -144798645 + ORSL DNA AcHobo 1 246 -29 1921 166 18 6 chr5 58287097 58287169 -144798363 - MER2 DNA MER2_type -10 335 265 2231 102 7 3 chr5 58287169 58287463 -144798069 + AluSg SINE Alu 1 295 -15 1921 166 18 6 chr5 58287463 58287721 -144797811 - MER2 DNA MER2_type -80 265 1 490 265 102 42 chr5 58287882 58287965 -144797567 + MLT1L LTR MaLR 362 439 -176 1635 147 121 22 chr5 58287965 58288276 -144797256 - AluJb SINE Alu 0 302 1 490 265 102 42 chr5 58288276 58288407 -144797125 + MLT1L LTR MaLR 439 589 -26 230 226 179 60 chr5 58288479 58288667 -144796865 + L1M4 LINE L1 4318 4541 -1605 1803 180 7 3 chr5 58288667 58288967 -144796565 + AluJo SINE Alu 1 301 -11 230 226 179 60 chr5 58288967 58289012 -144796520 + L1M4 LINE L1 4541 4579 -1567 359 117 20 0 chr5 58289078 58289141 -144796391 - L1ME3A LINE L1 -4 6160 6094 238 285 77 8 chr5 58289527 58289657 -144795875 + L1M4 LINE L1 5093 5231 -915 533 225 20 7 chr5 58289768 58289873 -144795659 - LTR16A1 LTR ERVL 0 457 371 180 0 0 0 chr5 58289873 58289893 -144795639 + (CAGGA)n Simple_repeat Simple_repeat 1 20 0 533 225 20 7 chr5 58289893 58289915 -144795617 - LTR16A1 LTR ERVL -86 371 351 800 169 92 157 chr5 58290023 58290047 -144795485 - MER57A LTR ERV1 -12 391 367 1866 169 7 0 chr5 58290047 58290354 -144795178 + AluJo SINE Alu 1 309 -3 800 169 92 157 chr5 58290354 58290744 -144794788 - MER57A LTR ERV1 -36 367 4 3115 108 19 2 chr5 58290818 58291245 -144794287 + MER57B LTR ERV1 1 434 0 1764 148 4 4 chr5 58291246 58291509 -144794023 + MER57B-int LTR ERV1 1 263 -7274 * 5134 131 48 11 chr5 58291496 58292437 -144793095 + MER57B-int LTR ERV1 937 2017 -3929 * 13834 121 47 24 chr5 58292433 58293577 -144791955 + MER57B-int LTR ERV1 2167 3283 -4254 2728 17 0 0 chr5 58293577 58293870 -144791662 + AluYa5 SINE Alu 10 302 -9 13834 121 47 24 chr5 58293870 58294236 -144791296 + MER57B-int LTR ERV1 3283 3639 -3898 180 0 0 0 chr5 58294236 58294256 -144791276 + (TA)n Simple_repeat Simple_repeat 1 20 0 13834 121 47 24 chr5 58294256 58296476 -144789056 + MER57B-int LTR ERV1 3639 7153 -384 430 185 92 25 chr5 58296476 58296595 -144788937 + LTR54B LTR ERV1 5 131 -367 1302 126 126 0 chr5 58296595 58296825 -144788707 + MER57B-int LTR ERV1 7279 7537 0 2890 115 2 20 chr5 58296825 58297267 -144788265 + MER57B LTR ERV1 1 434 0 256 333 16 8 chr5 58297333 58297459 -144788073 - LTR16A1 LTR ERVL -330 127 1 446 236 32 73 chr5 58297736 58297973 -144787559 + L1ME LINE L1 5417 5659 -462 5492 132 17 12 chr5 58298103 58298814 -144786718 - L1P4 LINE L1 -443 5725 5019 2297 131 6 16 chr5 58298814 58299180 -144786352 + THE1B LTR MaLR 3 364 0 10411 112 36 13 chr5 58299180 58300722 -144784810 + THE1B-int LTR MaLR 1 1578 -2 2568 99 8 6 chr5 58300724 58301087 -144784445 + THE1B LTR MaLR 1 364 0 5492 132 17 12 chr5 58301087 58301812 -144783720 - L1P4 LINE L1 -1149 5019 4288 3675 62 19 0 chr5 58301812 58302293 -144783239 + L1PA13 LINE L1 5668 6159 -4 2151 135 0 3 chr5 58302703 58303007 -144782525 + AluSx SINE Alu 1 303 -9 513 204 9 9 chr5 58303227 58303340 -144782192 - LTR33 LTR ERVL 0 521 409 573 264 39 28 chr5 58303567 58303745 -144781787 - MLT1I LTR MaLR -191 218 39 2139 99 32 0 chr5 58303747 58304029 -144781503 + AluSx SINE Alu 1 291 -21 1336 174 20 8 chr5 58304151 58304459 -144781073 + MER33 DNA MER1_type 1 302 -22 665 301 112 43 chr5 58305277 58305788 -144779744 - MLT2E LTR ERVL -49 579 34 220 300 75 0 chr5 58306441 58306521 -144779011 + MIR3 SINE MIR 92 177 -31 1362 184 0 0 chr5 58306746 58306969 -144778563 + MER58A DNA MER1_type 1 223 -1 326 233 56 56 chr5 58307132 58307222 -144778310 + MIR SINE MIR 36 125 -137 296 285 73 16 chr5 58307991 58308114 -144777418 - MIR3 SINE MIR -64 144 15 206 284 64 28 chr5 58308111 58308220 -144777312 + MIR SINE MIR 31 143 -119 * 287 326 15 15 chr5 58308362 58308494 -144777038 + MLT1L LTR MaLR 116 247 -368 1684 261 146 9 chr5 58308664 58309570 -144775962 - L2 LINE L2 -3 3310 2275 262 258 233 0 chr5 58309629 58309749 -144775783 + MIR SINE MIR 73 220 -42 331 213 62 0 chr5 58309950 58310030 -144775502 - MIR SINE MIR -102 160 76 7007 57 2 0 chr5 58310377 58311966 -144773566 + L1PA7 LINE L1 4550 6140 -14 196 27 54 27 chr5 58311974 58312011 -144773521 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2345 115 0 0 chr5 58312117 58312429 -144773103 + AluSx SINE Alu 1 312 0 225 284 114 0 chr5 58312602 58312690 -144772842 - MIR SINE MIR -1 261 164 1551 240 24 22 chr5 58312788 58313251 -144772281 - L1MB7 LINE L1 -10 6174 5711 391 305 0 17 chr5 58313255 58313373 -144772159 - MIR SINE MIR -119 143 28 26 0 0 0 chr5 58313445 58313471 -144772061 + AT_rich Low_complexity Low_complexity 1 26 0 13238 181 31 22 chr5 58313986 58317271 -144768261 - L1MB3 LINE L1 -15 6404 3151 2127 116 0 7 chr5 58317271 58317565 -144767967 - AluSc SINE Alu -17 292 1 13238 181 31 22 chr5 58317565 58317871 -144767661 - L1MB3 LINE L1 -3268 3151 2849 198 0 0 0 chr5 58317871 58317893 -144767639 + (TA)n Simple_repeat Simple_repeat 2 23 0 2721 26 0 0 chr5 58317893 58318202 -144767330 - AluYb8 SINE Alu -9 309 1 13238 181 31 22 chr5 58318202 58319940 -144765592 - L1MB3 LINE L1 -3570 2849 1002 216 0 0 0 chr5 58319950 58319974 -144765558 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 1687 179 3 17 chr5 58319974 58320259 -144765273 - AluJb SINE Alu -29 283 1 13238 181 31 22 chr5 58320259 58321256 -144764276 - L1MB3 LINE L1 -5417 1002 16 1262 195 205 85 chr5 58321321 58321473 -144764059 + MLT1F LTR MaLR 1 133 -409 1723 193 0 13 chr5 58321473 58321800 -144763732 + AluJo SINE Alu 1 312 0 1262 195 205 85 chr5 58321800 58322130 -144763402 + MLT1F LTR MaLR 133 541 -1 2273 174 13 7 chr5 58322239 58322517 -144763015 + L1MB4 LINE L1 5561 5845 -338 1019 149 149 14 chr5 58322517 58322725 -144762807 + MER46A DNA MER2_type 1 236 0 2273 174 13 7 chr5 58322725 58322895 -144762637 + L1MB4 LINE L1 5845 6012 -171 4649 90 13 0 chr5 58322895 58323528 -144762004 - L1PA13 LINE L1 -5 6158 5518 996 92 92 0 chr5 58323530 58323693 -144761839 + L1MB4 LINE L1 6002 6179 -1 2493 188 157 117 chr5 58323802 58324783 -144760749 + LTR28 LTR ERV1 1 1020 0 275 215 15 0 chr5 58324883 58324948 -144760584 + CT-rich Low_complexity Low_complexity 1 66 0 217 289 161 34 chr5 58325752 58325901 -144759631 + MIR SINE MIR 78 245 -17 7067 57 11 16 chr5 58326427 58327964 -144757568 + SVA Other Other 1 1413 0 249 180 98 0 chr5 58328188 58328249 -144757283 + MLT1J2 LTR MaLR 381 447 -3 1926 153 17 3 chr5 58328625 58328912 -144756620 - AluSx SINE Alu -21 291 1 249 325 40 40 chr5 58329266 58329392 -144756140 + L2 LINE L2 2924 3049 -223 2398 130 90 9 chr5 58329528 58329952 -144755580 - LTR24 LTR ERV1 0 467 10 1338 206 16 41 chr5 58332074 58332456 -144753076 + MLT1A1 LTR MaLR 1 457 0 1476 149 14 31 chr5 58332481 58332769 -144752763 + L1MC1 LINE L1 6051 6333 0 1070 219 26 13 chr5 58333580 58333808 -144751724 + MIR SINE MIR 32 262 0 24 0 0 0 chr5 58334555 58334579 -144750953 + AT_rich Low_complexity Low_complexity 1 24 0 999 171 20 5 chr5 58334675 58334874 -144750658 + MER3 DNA MER1_type 7 208 -1 598 240 57 57 chr5 58334946 58335025 -144750507 - MER5B DNA MER1_type 0 178 100 2290 113 33 28 chr5 58335025 58335387 -144750145 - THE1B LTR MaLR 0 364 1 598 240 57 57 chr5 58335387 58335482 -144750050 - MER5B DNA MER1_type -77 101 4 201 297 0 95 chr5 58335482 58335521 -144750011 + L3b LINE CR1 1533 1564 -19 198 0 0 0 chr5 58336214 58336236 -144749296 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1953 140 37 20 chr5 58336342 58336692 -144748840 + THE1B LTR MaLR 8 363 -1 245 254 64 59 chr5 58336732 58336968 -144748564 + L1ME3A LINE L1 4783 5019 -1127 300 223 115 54 chr5 58337026 58337174 -144748358 + L1ME3A LINE L1 5094 5250 -896 642 295 69 20 chr5 58337253 58337781 -144747751 + L1ME3A LINE L1 5371 5950 -220 2000 135 26 0 chr5 58338012 58338316 -144747216 + AluSx SINE Alu 1 312 0 5813 113 28 3 chr5 58338524 58340298 -144745234 - L1PA13 LINE L1 -7 6156 4357 693 189 41 0 chr5 58341287 58341409 -144744123 + MER5A DNA MER1_type 1 127 -62 225 0 0 0 chr5 58341454 58341479 -144744053 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 185 286 169 73 chr5 58341882 58342060 -144743472 - L2 LINE L2 -107 3165 2971 230 267 0 35 chr5 58342780 58342866 -144742666 - MER20B DNA MER1_type -2 781 699 496 245 29 15 chr5 58342956 58343202 -144742330 - MER20B DNA MER1_type -193 590 290 186 296 0 0 chr5 58343202 58343273 -144742259 + T-rich Low_complexity Low_complexity 1 71 0 * 714 179 17 6 chr5 58343266 58343439 -144742093 + CT-rich Low_complexity Low_complexity 3 177 0 302 282 69 8 chr5 58343470 58343601 -144741931 - MER20B DNA MER1_type -538 245 107 286 229 55 28 chr5 58344106 58344215 -144741317 - LTR33 LTR ERVL 0 521 410 2322 101 0 0 chr5 58344319 58344616 -144740916 + AluSq SINE Alu 1 297 -16 388 250 24 8 chr5 58344748 58344872 -144740660 - LTR33 LTR ERVL -388 133 8 2113 121 0 7 chr5 58345334 58345624 -144739908 + AluSx SINE Alu 1 288 -24 232 133 40 13 chr5 58345766 58345779 -144739753 + A-rich Low_complexity Low_complexity 2 13 -65 1684 69 0 5 chr5 58345779 58345983 -144739549 + AluY SINE Alu 85 287 -24 232 133 40 13 chr5 58345983 58346044 -144739488 + A-rich Low_complexity Low_complexity 13 78 0 279 294 69 44 chr5 58346136 58346325 -144739207 + MIR3 SINE MIR 2 192 -40 464 206 10 29 chr5 58346379 58346481 -144739051 + MER5A DNA MER1_type 1 100 -89 2455 76 0 3 chr5 58346882 58347186 -144738346 + AluY SINE Alu 1 303 -8 1191 174 59 25 chr5 58347275 58347610 -144737922 + MLT1F1 LTR MaLR 129 544 -23 415 329 26 10 chr5 58347622 58347882 -144737650 + MLT1F-int LTR MaLR 3 384 -987 528 330 11 5 chr5 58348223 58348408 -144737124 + MLT1F-int LTR MaLR 699 884 -487 744 165 9 0 chr5 58348499 58348614 -144736918 + FLAM_C SINE Alu 2 117 -16 287 96 19 0 chr5 58348811 58348863 -144736669 + (TG)n Simple_repeat Simple_repeat 2 54 0 484 252 48 87 chr5 58348869 58349075 -144736457 + MLT1F-int LTR MaLR 1174 1371 0 1681 194 188 44 chr5 58349075 58349549 -144735983 + MLT1F LTR MaLR 1 542 0 317 313 116 0 chr5 58350638 58350750 -144734782 + MIR3 SINE MIR 67 191 -17 2367 88 0 19 chr5 58350911 58351229 -144734303 - AluSx SINE Alu 0 312 1 33 43 0 0 chr5 58351799 58351846 -144733686 + AT_rich Low_complexity Low_complexity 1 47 0 2461 70 0 16 chr5 58354474 58354788 -144730744 - AluY SINE Alu -2 309 1 1979 130 3 30 chr5 58355138 58355438 -144730094 + AluSx SINE Alu 3 294 -18 234 0 0 0 chr5 58355831 58355857 -144729675 + (T)n Simple_repeat Simple_repeat 1 26 0 278 227 0 30 chr5 58356621 58356687 -144728845 - MIR SINE MIR -72 190 127 2414 74 3 6 chr5 58358929 58359241 -144726291 - AluY SINE Alu 0 311 1 1220 80 9 121 chr5 58359675 58359743 -144725789 - MSTC LTR MaLR -3 425 351 1944 159 0 3 chr5 58359743 58360044 -144725488 - AluJb SINE Alu -12 300 1 1220 80 9 121 chr5 58360044 58360059 -144725473 - MSTC LTR MaLR -77 351 336 1943 150 0 22 chr5 58360059 58360372 -144725160 - AluSx SINE Alu -6 306 1 1220 80 9 121 chr5 58360372 58360511 -144725021 - MSTC LTR MaLR -92 336 227 2488 48 0 7 chr5 58360527 58360822 -144724710 - AluY SINE Alu -18 293 1 1673 154 3 41 chr5 58361386 58361679 -144723853 - AluJo SINE Alu -30 282 1 21 36 0 0 chr5 58361831 58361859 -144723673 + AT_rich Low_complexity Low_complexity 1 28 0 1335 197 28 8 chr5 58362627 58362881 -144722651 + AluJo SINE Alu 44 302 -10 26 50 0 0 chr5 58364044 58364084 -144721448 + AT_rich Low_complexity Low_complexity 1 40 0 2190 96 3 19 chr5 58366318 58366631 -144718901 + AluSx SINE Alu 1 308 -4 205 240 0 20 chr5 58418689 58418739 -144666793 + CT-rich Low_complexity Low_complexity 5 53 0 23 33 0 0 chr5 58420898 58420928 -144664604 + AT_rich Low_complexity Low_complexity 1 30 0 1146 127 0 6 chr5 58421813 58421979 -144663553 - AluSq SINE Alu -12 301 137 401 314 103 22 chr5 58422048 58422271 -144663261 - MIR SINE MIR -20 242 2 212 196 0 18 chr5 58423323 58423379 -144662153 + CT-rich Low_complexity Low_complexity 4 58 0 317 244 12 12 chr5 58425153 58425235 -144660297 - MIR SINE MIR -23 239 158 415 276 86 23 chr5 58425272 58425446 -144660086 - MIR SINE MIR -49 213 29 375 296 26 33 chr5 58425493 58425645 -144659887 + L1ME LINE L1 5596 5746 -424 2242 275 94 22 chr5 58426999 58427891 -144657641 + HAL1 LINE L1 1 956 -1551 216 200 0 0 chr5 58427894 58427939 -144657593 + (CA)n Simple_repeat Simple_repeat 2 46 0 1120 240 98 41 chr5 58427945 58428796 -144656736 + HAL1 LINE L1 1384 2321 -186 304 256 8 60 chr5 58429390 58429507 -144656025 + L2 LINE L2 3125 3235 -78 587 280 39 35 chr5 58429760 58429992 -144655540 - L2 LINE L2 -1231 2083 1851 248 284 118 83 chr5 58430048 58430397 -144655135 + L2 LINE L2 2185 2545 -769 2004 151 21 15 chr5 58430406 58430737 -144654795 + MER1B DNA MER1_type 1 333 -4 282 253 0 23 chr5 58430778 58430865 -144654667 + L2 LINE L2 3219 3303 -10 21 57 0 0 chr5 58433341 58433376 -144652156 + AT_rich Low_complexity Low_complexity 1 35 0 231 103 0 0 chr5 58433839 58433878 -144651654 + (TAA)n Simple_repeat Simple_repeat 1 39 0 25 0 0 0 chr5 58434121 58434146 -144651386 + AT_rich Low_complexity Low_complexity 1 25 0 334 191 15 0 chr5 58434393 58434461 -144651071 - Alu SINE Alu 0 301 233 201 263 53 102 chr5 58434650 58434935 -144650597 - L2 LINE L2 -731 2583 2313 330 315 0 0 chr5 58434990 58435079 -144650453 + L2 LINE L2 3225 3313 0 208 358 106 16 chr5 58436340 58436463 -144649069 + MIR3 SINE MIR 53 186 -22 229 284 25 25 chr5 58437040 58437121 -144648411 + MIR3 SINE MIR 101 181 -27 197 328 0 16 chr5 58437233 58437294 -144648238 - L2 LINE L2 -5 3308 3249 26 64 0 0 chr5 58437870 58437917 -144647615 + AT_rich Low_complexity Low_complexity 1 47 0 227 296 86 25 chr5 58439487 58439568 -144645964 - MIR3 SINE MIR -9 199 114 2327 84 0 0 chr5 58440138 58440424 -144645108 - AluSg SINE Alu -23 287 2 402 21 0 0 chr5 58441988 58442035 -144643497 + (CA)n Simple_repeat Simple_repeat 2 48 0 4536 234 57 17 chr5 58442813 58444241 -144641291 - L1M4 LINE L1 -1891 4255 2771 190 257 27 68 chr5 58445760 58445834 -144639698 - L2 LINE L2 -2817 497 427 22 0 0 0 chr5 58446123 58446145 -144639387 + AT_rich Low_complexity Low_complexity 1 22 0 278 164 0 16 chr5 58446768 58446829 -144638703 + CT-rich Low_complexity Low_complexity 3 62 0 2015 148 0 0 chr5 58447619 58447902 -144637630 - AluSx SINE Alu -27 285 3 241 315 126 9 chr5 58448585 58448696 -144636836 + L2 LINE L2 3144 3267 -5 415 260 6 103 chr5 58449275 58449606 -144635926 + L1M4 LINE L1 3817 4115 -2031 24 85 0 0 chr5 58450204 58450263 -144635269 + AT_rich Low_complexity Low_complexity 1 59 0 28 48 0 0 chr5 58450449 58450491 -144635041 + AT_rich Low_complexity Low_complexity 1 42 0 2600 43 37 0 chr5 58450507 58450832 -144634700 - MER41A LTR ERV1 -88 466 130 354 387 59 14 chr5 58450836 58451058 -144634474 + L1ME LINE L1 5438 5669 -452 215 343 43 0 chr5 58451932 58452002 -144633530 + L3 LINE CR1 37 109 -1468 637 291 105 12 chr5 58452098 58452345 -144633187 + L3 LINE CR1 324 593 -984 2527 74 0 0 chr5 58452499 58452808 -144632724 - AluSc SINE Alu 0 309 1 1258 322 116 24 chr5 58452901 58453684 -144631848 + L3 LINE CR1 660 1514 -63 290 331 92 8 chr5 58454968 58455098 -144630434 - MIR3 SINE MIR -18 190 50 2339 95 0 3 chr5 58455669 58455973 -144629559 - AluSq SINE Alu -10 303 1 801 195 166 0 chr5 58456251 58456420 -144629112 - MER58A DNA MER1_type -23 201 5 5645 17 0 0 chr5 58457389 58458044 -144627488 + L1P LINE L1 4343 4997 -1149 460 120 27 0 chr5 58458044 58458119 -144627413 + MSTB2 LTR MaLR 379 455 -2 414 294 8 56 chr5 58458496 58458622 -144626910 - L2 LINE L2 0 3272 3153 2196 116 3 0 chr5 58458722 58459023 -144626509 - AluY SINE Alu -9 302 1 458 245 44 19 chr5 58459755 58459914 -144625618 - L1MC5 LINE L1 -138 7823 7661 1425 180 12 4 chr5 58459976 58460232 -144625300 + AluJo SINE Alu 1 258 -54 28 71 0 0 chr5 58460271 58460327 -144625205 + AT_rich Low_complexity Low_complexity 1 56 0 822 144 24 0 chr5 58463032 58463157 -144622375 + AluJ SINE Alu 3 130 -172 6110 141 16 4 chr5 58463165 58464501 -144621031 + L1PB3 LINE L1 4799 6149 -5 1132 167 6 0 chr5 58464502 58464682 -144620850 + AluJ SINE Alu 121 301 -11 438 65 0 0 chr5 58465240 58465302 -144620230 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 2290 200 56 56 chr5 58466362 58466991 -144618541 - L1ME1 LINE L1 -4 6162 5534 770 152 46 0 chr5 58467601 58467752 -144617780 - L1ME1 LINE L1 -999 5147 4990 787 312 129 28 chr5 58467859 58468501 -144617031 - L1MEc LINE L1 -3414 2801 2133 200 188 0 0 chr5 58468888 58468920 -144616612 + (TG)n Simple_repeat Simple_repeat 1 32 0 309 311 49 30 chr5 58468960 58469124 -144616408 - HAL1 LINE L1 -1106 1401 1235 189 0 0 0 chr5 58469993 58470014 -144615518 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2214 100 0 0 chr5 58471011 58471320 -144614212 + AluSc SINE Alu 1 309 0 348 111 0 0 chr5 58471851 58471905 -144613627 + (CA)n Simple_repeat Simple_repeat 1 54 0 859 239 68 21 chr5 58472387 58472621 -144612911 + MIR SINE MIR 2 246 -16 208 265 59 49 chr5 58473154 58473256 -144612276 + MIR SINE MIR 156 258 -4 2264 96 0 3 chr5 58473581 58473884 -144611648 - AluY SINE Alu -9 302 1 240 35 0 0 chr5 58475397 58475426 -144610106 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2461 79 0 19 chr5 58475434 58475752 -144609780 + AluSx SINE Alu 1 312 0 367 314 107 0 chr5 58475912 58476033 -144609499 - MIR3 SINE MIR -17 191 58 629 299 23 0 chr5 58476308 58476485 -144609047 - MER63A DNA MER1_type 0 210 30 576 189 53 53 chr5 58476642 58476774 -144608758 - FLAM_A SINE Alu 0 133 2 263 298 75 0 chr5 58476829 58476923 -144608609 - MIR SINE MIR -14 248 148 260 234 53 105 chr5 58477091 58477230 -144608302 - LTR33A LTR ERVL -2 521 395 1790 200 39 58 chr5 58477230 58477694 -144607838 - LTR16A1 LTR ERVL -2 455 1 260 234 53 105 chr5 58477694 58477763 -144607769 - LTR33A LTR ERVL -128 395 324 929 204 122 16 chr5 58477773 58478018 -144607514 + MER63 DNA MER1_type 12 282 -779 566 260 0 40 chr5 58478019 58478169 -144607363 - MIR SINE MIR -47 215 72 2084 126 10 3 chr5 58479875 58480176 -144605356 - AluSx SINE Alu -5 307 5 388 228 40 40 chr5 58480481 58480582 -144604950 - L2 LINE L2 0 3272 3172 585 260 27 7 chr5 58481010 58481160 -144604372 + MIR SINE MIR 81 233 -29 219 299 112 19 chr5 58484163 58484270 -144601262 + MIR3 SINE MIR 5 121 -87 204 250 0 19 chr5 58484966 58485018 -144600514 - L2 LINE L2 -1 3312 3262 282 56 0 0 chr5 58485053 58485089 -144600443 + (CA)n Simple_repeat Simple_repeat 2 37 0 1227 167 116 6 chr5 58485248 58485559 -144599973 + Charlie1 DNA MER1_type 2263 2607 -154 731 261 129 23 chr5 58486272 58486536 -144598996 + MSTD LTR MaLR 66 357 -39 278 337 77 86 chr5 58486604 58487178 -144598354 + L2 LINE L2 2702 3272 0 557 284 138 30 chr5 58488770 58489002 -144596530 + MIR SINE MIR 6 262 0 21 0 0 0 chr5 58489777 58489798 -144595734 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 60 0 chr5 58489988 58490072 -144595460 + L2 LINE L2 3184 3272 0 2337 87 6 3 chr5 58490177 58490488 -144595044 - AluSq SINE Alu -1 312 1 22 35 0 0 chr5 58490902 58490931 -144594601 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr5 58492592 58492618 -144592914 + (CA)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr5 58492618 58492641 -144592891 + (CCA)n Simple_repeat Simple_repeat 1 23 0 251 279 88 29 chr5 58492724 58492860 -144592672 - MARNA DNA Mariner -114 472 329 33 56 0 0 chr5 58494197 58494251 -144591281 + AT_rich Low_complexity Low_complexity 1 54 0 197 320 68 19 chr5 58495235 58495338 -144590194 + L2 LINE L2 3146 3253 -19 372 248 50 10 chr5 58495340 58495441 -144590091 - L2 LINE L2 -5 3308 3204 40 67 0 0 chr5 58496406 58496481 -144589051 + AT_rich Low_complexity Low_complexity 1 75 0 193 384 14 43 chr5 58496550 58496688 -144588844 + MIR SINE MIR 75 208 -54 224 250 113 12 chr5 58496834 58496914 -144588618 + L2 LINE L2 3225 3312 -1 180 0 0 0 chr5 58496943 58496963 -144588569 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 2051 125 14 0 chr5 58496963 58497252 -144588280 - AluSx SINE Alu -19 293 1 1558 112 5 14 chr5 58497620 58497843 -144587689 + AluSc SINE Alu 44 264 -45 4050 212 30 25 chr5 58498560 58499279 -144586253 - L1MB3 LINE L1 0 6183 5469 1295 190 99 32 chr5 58499279 58499621 -144585911 + MLT1A1 LTR MaLR 1 365 0 4050 212 30 25 chr5 58499621 58499650 -144585882 - L1MB3 LINE L1 -714 5469 5442 2214 124 3 7 chr5 58499650 58499949 -144585583 - AluSx SINE Alu -14 298 1 4050 212 30 25 chr5 58499949 58501077 -144584455 - L1MB3 LINE L1 -741 5442 4302 275 177 0 16 chr5 58501073 58501135 -144584397 + L1 LINE L1 4207 4267 -1879 * 260 326 227 0 chr5 58504292 58504433 -144581099 - MIR SINE MIR -1 261 89 399 321 39 72 chr5 58504603 58504908 -144580624 - L2 LINE L2 -92 3180 2886 24 0 0 0 chr5 58504945 58504969 -144580563 + AT_rich Low_complexity Low_complexity 1 24 0 249 370 152 21 chr5 58505045 58505288 -144580244 - L2 LINE L2 -474 2840 2566 1276 124 21 0 chr5 58505631 58505817 -144579715 - AluJo SINE Alu -2 310 121 5774 11 0 0 chr5 58505835 58506481 -144579051 - L1PA2 LINE L1 -1 6154 5509 * 14347 26 5 0 chr5 58506480 58508947 -144576585 + L1PA3 LINE L1 3685 6155 0 203 133 0 50 chr5 58508951 58509011 -144576521 + (A)n Simple_repeat Simple_repeat 1 57 0 2423 144 69 2 chr5 58510002 58510452 -144575080 + MER31A LTR ERV1 6 485 0 1927 181 88 25 chr5 58510845 58511320 -144574212 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 58512220 58512241 -144573291 + AT_rich Low_complexity Low_complexity 1 21 0 182 188 0 0 chr5 58512662 58512694 -144572838 + L2 LINE L2 2600 2631 -683 1808 242 67 30 chr5 58512702 58513618 -144571914 + L2 LINE L2 2363 3312 -1 685 264 98 0 chr5 58514409 58514583 -144570949 - MIR SINE MIR 0 262 72 237 290 70 10 chr5 58515547 58515647 -144569885 - MER5A DNA MER1_type -5 184 79 * 310 276 38 19 chr5 58515562 58515651 -144569881 + MER5A DNA MER1_type 35 128 -61 2151 133 0 0 chr5 58515651 58515960 -144569572 - AluY SINE Alu -2 309 1 310 276 38 19 chr5 58515960 58515975 -144569557 + MER5A DNA MER1_type 128 141 -48 331 247 132 32 chr5 58516039 58516229 -144569303 - Charlie2 DNA MER1_type -56 2806 2598 7638 41 2 0 chr5 58516229 58517225 -144568307 - L1P LINE L1 -4188 1958 961 4627 35 0 0 chr5 58517212 58517821 -144567711 + L1PA3 LINE L1 5564 6172 0 * 1755 209 111 28 chr5 58517821 58518202 -144567330 - Charlie2 DNA MER1_type -257 2605 2257 2208 96 0 16 chr5 58518202 58518514 -144567018 - AluSg SINE Alu -3 307 1 1755 209 111 28 chr5 58518514 58518824 -144566708 - Charlie2 DNA MER1_type -605 2257 1856 513 247 51 32 chr5 58518815 58518973 -144566559 - Charlie2 DNA MER1_type -2452 330 170 * 566 199 46 8 chr5 58519105 58519236 -144566296 - L2 LINE L2 0 3313 3178 2403 198 12 16 chr5 58519329 58519830 -144565702 + MLT2B3 LTR ERVL 10 508 -46 1389 169 48 24 chr5 58519850 58520145 -144565387 + MER2 DNA MER2_type 1 302 -43 345 223 86 42 chr5 58520245 58520478 -144565054 - L1MEc LINE L1 -840 1736 1496 290 270 0 0 chr5 58520517 58520591 -144564941 + (TATG)n Simple_repeat Simple_repeat 2 75 0 1327 242 42 22 chr5 58520591 58520963 -144564569 - MLT2D LTR ERVL -40 480 1 411 256 30 60 chr5 58520963 58521024 -144564508 - L1MEc LINE L1 -4818 1397 1336 1514 190 46 39 chr5 58521024 58521208 -144564324 - AluJo SINE Alu -5 307 119 180 0 0 0 chr5 58521208 58521228 -144564304 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1514 190 46 39 chr5 58521228 58521348 -144564184 - AluJo SINE Alu -193 119 1 411 256 30 60 chr5 58521348 58521552 -144563980 - L1MEc LINE L1 -4879 1336 1140 2378 272 72 22 chr5 58521559 58522450 -144563082 - L1MEc LINE L1 -5426 970 36 201 296 53 53 chr5 58522664 58522816 -144562716 + L2 LINE L2 1806 1957 -1357 470 237 44 9 chr5 58522913 58523027 -144562505 + L2 LINE L2 3195 3312 -1 215 301 72 0 chr5 58523161 58523244 -144562288 + L2 LINE L2 2312 2400 -914 214 317 72 106 chr5 58524445 58524710 -144560822 - L2 LINE L2 0 3272 3017 368 237 123 0 chr5 58524798 58524912 -144560620 + MER46C DNA MER2_type 1 128 -210 399 356 107 34 chr5 58524942 58525475 -144560057 + L2 LINE L2 2403 2974 -340 233 250 58 0 chr5 58525675 58525727 -144559805 + L2 LINE L2 3235 3289 -24 874 166 131 30 chr5 58525929 58526128 -144559404 - MER20 DNA MER1_type 0 219 1 2001 217 54 75 chr5 58526881 58527641 -144557891 + L1MC4 LINE L1 7299 8042 0 1567 150 0 16 chr5 58527814 58528060 -144557472 + AluSq SINE Alu 72 313 0 404 308 148 33 chr5 58528360 58529046 -144556486 + L2 LINE L2 2456 3272 0 2366 113 0 0 chr5 58530171 58530481 -144555051 - AluSp SINE Alu -3 310 1 1898 166 10 0 chr5 58530491 58530798 -144554734 - AluSx SINE Alu -2 310 1 217 239 31 113 chr5 58530798 58530950 -144554582 + L2 LINE L2 2153 2293 -1021 476 207 238 12 chr5 58533818 58533982 -144551550 - MIR SINE MIR -49 213 13 190 311 68 0 chr5 58533985 58534059 -144551473 + L3 LINE CR1 1239 1317 -260 * 280 272 68 87 chr5 58534052 58534155 -144551377 - MIR SINE MIR -86 122 22 2226 118 7 0 chr5 58534580 58534886 -144550646 + AluSx SINE Alu 1 308 -4 719 202 0 0 chr5 58536494 58536623 -144548909 + FLAM_C SINE Alu 1 129 -4 2124 25 0 0 chr5 58536625 58536971 -144548561 - L1P1 LINE L1 -635 5520 5175 838 296 35 49 chr5 58537302 58537754 -144547778 - MLT1K LTR MaLR -100 488 43 234 91 0 0 chr5 58537903 58537936 -144547596 + (TG)n Simple_repeat Simple_repeat 2 34 0 983 164 94 20 chr5 58539124 58539325 -144546207 - MER46A DNA MER2_type -4 232 17 228 239 0 0 chr5 58539444 58539490 -144546042 - L2 LINE L2 -39 3233 3188 21 57 0 0 chr5 58539730 58539765 -144545767 + AT_rich Low_complexity Low_complexity 1 35 0 2673 30 0 0 chr5 58539844 58540145 -144545387 - AluY SINE Alu -10 301 1 1044 285 115 10 chr5 58540180 58540598 -144544934 - MLT1J LTR MaLR -49 462 1 252 266 120 82 chr5 58541021 58541179 -144544353 + MIR SINE MIR 29 192 -70 26 30 0 0 chr5 58542048 58542081 -144543451 + AT_rich Low_complexity Low_complexity 1 33 0 2612 94 0 27 chr5 58542696 58543070 -144542462 - THE1B LTR MaLR 0 364 1 422 258 148 0 chr5 58543108 58543236 -144542296 - MLT1J LTR MaLR -320 191 45 372 22 0 0 chr5 58543649 58543694 -144541838 + (TG)n Simple_repeat Simple_repeat 2 46 0 1791 131 76 0 chr5 58544324 58544599 -144540933 + AluJb SINE Alu 1 296 -16 188 133 0 0 chr5 58544660 58544690 -144540842 + L2 LINE L2 2698 2727 -587 23 54 0 0 chr5 58545196 58545233 -144540299 + AT_rich Low_complexity Low_complexity 1 37 0 586 158 103 0 chr5 58545651 58545797 -144539735 - Charlie1 DNA MER1_type -9 2752 2592 624 156 57 0 chr5 58545803 58545925 -144539607 + AluJo/FLAM SINE Alu 1 129 -173 515 158 144 0 chr5 58545925 58546071 -144539461 + AluSc SINE Alu 133 299 -10 4319 171 168 2 chr5 58546071 58547180 -144538352 - Charlie1 DNA MER1_type -172 2589 1 343 290 15 46 chr5 58547697 58547828 -144537704 - L2 LINE L2 -7 3306 3180 1417 190 67 53 chr5 58548119 58548493 -144537039 + MLT1B LTR MaLR 4 382 -8 262 313 171 45 chr5 58548523 58549009 -144536523 - L2 LINE L2 -509 2805 2259 183 204 0 0 chr5 58549014 58549058 -144536474 + GA-rich Low_complexity Low_complexity 1 44 0 220 250 28 42 chr5 58549099 58549171 -144536361 + MIR SINE MIR 81 151 -111 191 88 29 0 chr5 58549660 58549694 -144535838 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 2174 90 17 0 chr5 58549696 58549985 -144535547 - AluSg SINE Alu -2 308 15 282 315 129 6 chr5 58552510 58552688 -144532844 + MIR SINE MIR 12 211 -51 2357 110 41 39 chr5 58552926 58553289 -144532243 - THE1B LTR MaLR 0 364 1 441 329 114 14 chr5 58554901 58555120 -144530412 - MIR SINE MIR -10 252 12 23 54 0 0 chr5 58556821 58556858 -144528674 + AT_rich Low_complexity Low_complexity 1 37 0 1637 125 16 16 chr5 58556994 58557250 -144528282 + AluSg SINE Alu 46 301 -9 417 39 0 0 chr5 58558199 58558250 -144527282 + (TG)n Simple_repeat Simple_repeat 2 52 0 227 226 19 0 chr5 58558461 58558514 -144527018 + (TATG)n Simple_repeat Simple_repeat 2 55 0 257 266 0 16 chr5 58562782 58562846 -144522686 + (TG)n Simple_repeat Simple_repeat 1 63 0 1475 166 38 35 chr5 58563734 58564024 -144521508 - AluJb SINE Alu -21 291 1 6173 196 58 31 chr5 58564729 58566298 -144519234 - L1 LINE L1 -1694 4452 2841 1112 165 10 5 chr5 58566303 58566497 -144519035 - MER46B DNA MER2_type -166 70 1 256 200 0 80 chr5 58566499 58566574 -144518958 - L1ME LINE L1 -570 5551 5483 258 229 0 0 chr5 58567402 58567450 -144518082 - L2 LINE L2 -20 3293 3246 1909 152 7 0 chr5 58568181 58568477 -144517055 + AluJb SINE Alu 1 298 -14 927 220 106 59 chr5 58568750 58569046 -144516486 + LTR56 LTR ERV1 22 344 -101 1885 145 10 10 chr5 58569046 58569350 -144516182 + AluJb SINE Alu 1 304 -8 927 220 106 59 chr5 58569350 58569458 -144516074 + LTR56 LTR ERV1 344 445 0 791 206 40 23 chr5 58570107 58570282 -144515250 - MER5B DNA MER1_type 0 178 1 228 296 170 30 chr5 58570339 58570474 -144515058 - MER5A DNA MER1_type 0 189 25 2578 151 39 10 chr5 58571704 58572120 -144513412 + MSTA LTR MaLR 1 428 0 932 158 0 0 chr5 58573144 58573277 -144512255 - FLAM_C SINE Alu 0 133 1 864 236 114 67 chr5 58573457 58573959 -144511573 - L2 LINE L2 -4 3309 2758 451 205 24 63 chr5 58573962 58574089 -144511443 - MLT1A2 LTR MaLR -252 122 1 28 29 0 0 chr5 58574324 58574359 -144511173 + AT_rich Low_complexity Low_complexity 1 35 0 632 155 77 52 chr5 58575227 58575359 -144510173 - MER106B DNA MER1_type -1 1058 920 447 19 0 0 chr5 58575359 58575411 -144510121 + (TG)n Simple_repeat Simple_repeat 1 52 0 632 155 77 52 chr5 58575411 58575433 -144510099 - MER106B DNA MER1_type -139 920 900 393 330 68 40 chr5 58575499 58575853 -144509679 - L2 LINE L2 -721 2593 2230 273 277 34 113 chr5 58576284 58576318 -144509214 - MIR3 SINE MIR -23 185 150 2153 125 3 0 chr5 58576318 58576613 -144508919 + AluSq SINE Alu 1 296 -17 273 277 34 113 chr5 58576613 58576755 -144508777 - MIR3 SINE MIR -58 150 23 44 46 0 0 chr5 58577270 58577335 -144508197 + AT_rich Low_complexity Low_complexity 1 65 0 264 76 28 19 chr5 58677520 58677627 -144407905 + (TA)n Simple_repeat Simple_repeat 1 108 0 320 223 21 32 chr5 58677627 58677721 -144407811 + L1MC4 LINE L1 6613 6705 -1337 433 106 56 12 chr5 58677721 58677881 -144407651 + (TA)n Simple_repeat Simple_repeat 1 167 0 2514 124 23 5 chr5 58678663 58679059 -144406473 + MER57B LTR ERV1 32 434 0 2113 110 31 3 chr5 58680313 58680605 -144404927 + AluSx SINE Alu 5 304 -8 259 209 118 59 chr5 58680781 58680968 -144404564 + L1M4 LINE L1 2115 2312 -3834 2148 118 3 22 chr5 58681665 58681979 -144403553 - AluSq SINE Alu -5 308 1 405 273 199 6 chr5 58682011 58682187 -144403345 + MIR SINE MIR 48 257 -5 1971 136 7 17 chr5 58682609 58682903 -144402629 + AluJb SINE Alu 1 291 -21 604 186 41 3 chr5 58683014 58683312 -144402220 + (TA)n Simple_repeat Simple_repeat 1 309 0 1981 130 0 14 chr5 58683374 58683693 -144401839 + AluSx SINE Alu 13 312 0 866 153 0 0 chr5 58683693 58683817 -144401715 + AluSq SINE Alu 134 257 -56 789 78 16 16 chr5 58683818 58683946 -144401586 + (GGAA)n Simple_repeat Simple_repeat 3 130 0 285 230 23 35 chr5 58683988 58684075 -144401457 + L2 LINE L2 3161 3246 -67 193 325 77 26 chr5 58684108 58684225 -144401307 + MIR SINE MIR 106 228 -34 21 0 0 0 chr5 58684232 58684253 -144401279 + AT_rich Low_complexity Low_complexity 1 21 0 5426 50 15 0 chr5 58684363 58685019 -144400513 - MER11C LTR ERVK -405 666 1 1610 104 120 35 chr5 58686037 58686335 -144399197 - AluY SINE Alu 0 320 1 1547 157 90 0 chr5 58686569 58686836 -144398696 + AluJb SINE Alu 14 304 -8 970 117 0 29 chr5 58687580 58687717 -144397815 - FLAM_C SINE Alu 0 133 1 807 154 8 0 chr5 58688196 58688319 -144397213 - FLAM_C SINE Alu -19 124 1 224 57 0 29 chr5 58688395 58688430 -144397102 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 5956 44 48 0 chr5 58688452 58689174 -144396358 - L1PA5 LINE L1 -5 6149 5393 * 10128 56 6 4 chr5 58689171 58690444 -144395088 + L1P LINE L1 3540 4815 -1331 21 57 0 0 chr5 58690766 58690801 -144394731 + AT_rich Low_complexity Low_complexity 1 35 0 801 261 37 5 chr5 58690898 58691116 -144394416 - MIR SINE MIR -34 228 4 557 188 10 0 chr5 58692384 58692485 -144393047 + MLT1E LTR MaLR 40 141 -452 216 0 0 0 chr5 58692497 58692521 -144393011 + (TA)n Simple_repeat Simple_repeat 1 24 0 3222 145 105 140 chr5 58692533 58692899 -144392633 + MER21A LTR ERV1 34 411 -520 1863 138 7 10 chr5 58692899 58693188 -144392344 + AluJb SINE Alu 1 288 -24 3222 145 105 140 chr5 58693188 58693450 -144392082 + MER21A LTR ERV1 411 622 -309 2068 143 0 0 chr5 58693450 58693757 -144391775 + AluSx SINE Alu 2 308 -4 3222 145 105 140 chr5 58693757 58694057 -144391475 + MER21A LTR ERV1 622 931 0 800 147 62 0 chr5 58694125 58694254 -144391278 - AluJo SINE Alu -174 138 2 835 151 78 94 chr5 58695290 58695398 -144390134 + AluJ SINE Alu 5 110 -202 2251 112 0 0 chr5 58695398 58695693 -144389839 - AluSx SINE Alu -17 295 1 835 151 78 94 chr5 58695693 58695776 -144389756 + AluJ SINE Alu 110 193 -119 264 252 79 43 chr5 58695776 58695915 -144389617 - MER51D LTR ERV1 0 657 514 2851 166 20 61 chr5 58695969 58696338 -144389194 - LTR60 LTR ERV1 -2 584 248 2170 113 17 0 chr5 58696338 58696630 -144388902 - AluSq SINE Alu -16 297 1 2851 166 20 61 chr5 58696630 58696869 -144388663 - LTR60 LTR ERV1 -338 248 1 270 116 23 0 chr5 58696869 58696912 -144388620 + AluJ SINE Alu 190 233 -69 1759 141 57 3 chr5 58696996 58697293 -144388239 + MER34C LTR ERV1 1 313 -272 1612 171 18 11 chr5 58697395 58697669 -144387863 - AluJb SINE Alu -34 278 3 1564 87 10 0 chr5 58698526 58698732 -144386800 - MER57B LTR ERV1 -197 237 30 2409 100 0 3 chr5 58698732 58699042 -144386490 + AluSg SINE Alu 1 309 -1 332 93 0 0 chr5 58699073 58699116 -144386416 - MER57B LTR ERV1 -389 45 3 234 150 0 0 chr5 58699236 58699276 -144386256 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 492 216 111 76 chr5 58699400 58699571 -144385961 - MER102a DNA MER1_type -8 322 146 2134 125 10 0 chr5 58699574 58699869 -144385663 - AluSx SINE Alu -14 298 1 2346 82 3 0 chr5 58699873 58700176 -144385356 - AluY SINE Alu -7 304 1 1961 144 0 23 chr5 58700422 58700727 -144384805 + AluJb SINE Alu 7 304 -8 205 182 30 15 chr5 58701190 58701256 -144384276 + A-rich Low_complexity Low_complexity 2 68 0 34 55 0 0 chr5 58701273 58701328 -144384204 + AT_rich Low_complexity Low_complexity 1 55 0 27210 74 7 7 chr5 58701328 58702549 -144382983 - HERVK9 LTR ERVK -2345 3571 2351 1995 84 0 4 chr5 58702549 58702798 -144382734 + AluY SINE Alu 50 297 -14 27210 74 7 7 chr5 58702798 58704325 -144381207 - HERVK9 LTR ERVK -3565 2351 761 190 217 0 83 chr5 58704325 58704385 -144381147 - MER5B DNA MER1_type -69 109 55 27210 74 7 7 chr5 58704385 58705147 -144380385 - HERVK9 LTR ERVK -5154 762 1 3536 101 0 4 chr5 58705147 58705621 -144379911 - MER9 LTR ERVK 0 511 40 11330 89 8 5 chr5 58705637 58707822 -144377710 - HERVK9 LTR ERVK 0 8032 3776 2216 212 31 13 chr5 58708208 58708665 -144376867 + LTR32 LTR ERVL 7 471 0 900 274 111 66 chr5 58708789 58708865 -144376667 - LTR33 LTR ERVL -12 509 438 2159 129 7 0 chr5 58708865 58709174 -144376358 + AluSx SINE Alu 1 311 -1 900 274 111 66 chr5 58709174 58709583 -144375949 - LTR33 LTR ERVL -83 438 2 1879 72 4 0 chr5 58710609 58710845 -144374687 - MER11B LTR ERVK 0 1236 1000 405 267 102 73 chr5 58711430 58711915 -144373617 + MLT1H LTR MaLR 1 623 -3 3668 130 14 24 chr5 58712366 58712941 -144372591 + MER61E LTR ERV1 1 569 0 842 298 68 25 chr5 58713170 58713566 -144371966 + LTR33 LTR ERVL 109 521 0 2525 58 3 0 chr5 58713658 58713952 -144371580 - AluY SINE Alu -14 297 3 2093 133 3 0 chr5 58713955 58714255 -144371277 - AluSx SINE Alu -11 301 1 512 215 9 0 chr5 58714262 58714369 -144371163 + MIR SINE MIR 85 192 -70 548 241 18 0 chr5 58714378 58714490 -144371042 + MER81 DNA DNA 1 114 0 233 286 0 0 chr5 58714494 58714557 -144370975 + MIR SINE MIR 200 262 0 2294 122 0 0 chr5 58714746 58715057 -144370475 - AluSx SINE Alu -1 311 1 992 185 63 63 chr5 58715075 58715329 -144370203 - MLT1B LTR MaLR -136 254 1 1397 184 13 57 chr5 58715528 58715843 -144369689 - L1MB7 LINE L1 0 6184 5884 270 186 0 0 chr5 58717208 58717251 -144368281 - MER81 DNA DNA -71 43 1 5243 49 5 2 chr5 58717923 58718591 -144366941 + L1PA5 LINE L1 5506 6175 0 2425 188 17 17 chr5 58718686 58719155 -144366377 - LTR32 LTR ERVL 0 471 3 2457 35 0 0 chr5 58719569 58719857 -144365675 - L1PA8 LINE L1 -324 5848 5561 221 286 122 61 chr5 58719920 58720018 -144365514 + L2 LINE L2 3168 3271 -1 446 330 60 0 chr5 58720146 58720331 -144365201 - L2 LINE L2 -520 2794 2599 638 197 0 0 chr5 58720356 58720473 -144365059 + MER5B DNA MER1_type 61 177 -1 2550 104 84 25 chr5 58720716 58721120 -144364412 + MSTA LTR MaLR 1 428 0 1740 94 130 32 chr5 58722210 58722487 -144363045 - AluSg SINE Alu -6 304 1 830 199 128 12 chr5 58722612 58722864 -144362668 + MLT1F1 LTR MaLR 226 565 -2 800 288 4 18 chr5 58722864 58723092 -144362440 - LTR16A LTR ERVL -210 240 16 348 323 150 20 chr5 58723394 58723648 -144361884 - LTR33 LTR ERVL 0 521 235 269 263 26 0 chr5 58723657 58723733 -144361799 - LTR33 LTR ERVL -424 97 20 2363 90 3 3 chr5 58723772 58724072 -144361460 + AluSx SINE Alu 1 300 -12 887 182 18 0 chr5 58724276 58724446 -144361086 + L1MD1 LINE L1 6069 6241 -1 2781 163 82 2 chr5 58724465 58724967 -144360565 + MER34 LTR ERV1 1 542 0 677 47 0 0 chr5 58725528 58725614 -144359918 - L1P LINE L1 -771 5383 5298 361 312 61 5 chr5 58725769 58725972 -144359560 - L2 LINE L2 -298 3015 2791 21 36 0 0 chr5 58727086 58727114 -144358418 + AT_rich Low_complexity Low_complexity 1 28 0 207 125 0 0 chr5 58727335 58727367 -144358165 + MIR SINE MIR 116 147 -115 345 317 10 0 chr5 58727415 58727516 -144358016 - MIR SINE MIR -156 106 5 30 59 0 0 chr5 58728105 58728156 -144357376 + GC_rich Low_complexity Low_complexity 1 51 0 27 73 0 0 chr5 58728526 58728581 -144356951 + GC_rich Low_complexity Low_complexity 1 55 0 301 336 9 0 chr5 58730989 58731096 -144354436 - L3 LINE CR1 -125 1452 1345 262 323 80 35 chr5 58731340 58731541 -144353991 - L3 LINE CR1 -576 1001 792 1690 153 0 21 chr5 58731847 58732134 -144353398 + AluJo SINE Alu 14 294 -18 893 121 0 8 chr5 58732161 58732285 -144353247 - FLAM_C SINE Alu -20 123 1 292 188 0 0 chr5 58732728 58732776 -144352756 + Charlie5 DNA MER1_type 39 86 -2526 * 374 198 79 30 chr5 58732734 58732835 -144352697 - MER3 DNA MER1_type -103 106 1 21 0 0 0 chr5 58732889 58732910 -144352622 + AT_rich Low_complexity Low_complexity 1 21 0 716 197 0 15 chr5 58735677 58735809 -144349723 + FLAM_A SINE Alu 2 131 -2 290 258 11 34 chr5 58736059 58736148 -144349384 + MIR SINE MIR 60 146 -62 2115 130 0 10 chr5 58736531 58736823 -144348709 - AluSx SINE Alu -23 289 1 1225 234 82 59 chr5 58737039 58737904 -144347628 - L2 LINE L2 -5 3308 2439 197 231 0 0 chr5 58738189 58738228 -144347304 + L2 LINE L2 3233 3271 -1 279 79 0 0 chr5 58738542 58738580 -144346952 + (CA)n Simple_repeat Simple_repeat 1 38 0 204 299 47 37 chr5 58739148 58739255 -144346277 - L2 LINE L2 -212 3060 2953 232 302 75 19 chr5 58739320 58739426 -144346106 + MER5B DNA MER1_type 67 178 0 651 167 54 42 chr5 58739735 58739945 -144345587 + MER58 DNA MER1_type 3 2420 0 252 245 0 0 chr5 58739987 58740040 -144345492 - MIR SINE MIR -14 248 196 273 227 202 25 chr5 58740109 58740228 -144345304 + MIR SINE MIR 6 145 -117 1641 232 79 7 chr5 58740295 58740726 -144344806 - MLT1C LTR MaLR 0 467 6 315 244 58 0 chr5 58740759 58740845 -144344687 - MIR SINE MIR -118 144 54 285 250 12 139 chr5 58740986 58741158 -144344374 - MIR SINE MIR -3 259 110 2432 84 7 3 chr5 58741165 58741473 -144344059 - AluSq SINE Alu 0 313 5 204 40 0 0 chr5 58742731 58742756 -144342776 + (T)n Simple_repeat Simple_repeat 1 25 0 291 268 126 38 chr5 58743976 58744159 -144341373 + MIR SINE MIR 43 241 -21 183 80 0 0 chr5 58744650 58744675 -144340857 + (T)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr5 58745436 58745464 -144340068 + AT_rich Low_complexity Low_complexity 1 28 0 206 301 175 10 chr5 58746102 58746205 -144339327 + MIR3 SINE MIR 66 185 -23 6743 52 2 0 chr5 58746658 58747472 -144338060 - L1PA5 LINE L1 -3 6151 5336 839 142 0 0 chr5 58747472 58747592 -144337940 + AluJb SINE Alu 1 120 -192 1014 132 57 13 chr5 58749456 58749615 -144335917 - FRAM SINE Alu -13 163 1 1226 86 0 0 chr5 58750254 58750468 -144335064 - AluSq SINE Alu 0 347 134 1747 184 0 16 chr5 58750638 58750948 -144334584 - AluJb SINE Alu -7 305 1 2454 93 0 0 chr5 58751449 58751761 -144333771 - AluSq SINE Alu -1 312 1 24 0 0 0 chr5 58751838 58751862 -144333670 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr5 58754786 58754808 -144330724 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 24 53 0 0 chr5 58755091 58755129 -144330403 + AT_rich Low_complexity Low_complexity 1 38 0 368 266 107 24 chr5 58757705 58757874 -144327658 - MIR SINE MIR -78 184 2 295 293 122 27 chr5 58758895 58759083 -144326449 + MIR SINE MIR 8 213 -49 252 245 102 10 chr5 58759175 58759233 -144326299 + MIR SINE MIR 84 135 -127 1114 186 111 81 chr5 58759233 58759566 -144325966 + MER2 DNA MER2_type 1 343 -1 252 245 102 10 chr5 58759566 58759605 -144325927 + MIR SINE MIR 135 190 -72 2282 84 0 3 chr5 58761027 58761314 -144324218 - AluSx SINE Alu -26 286 1 308 257 156 0 chr5 58762028 58762137 -144323395 - MIR SINE MIR -119 143 18 821 255 173 39 chr5 58763091 58763772 -144321760 - L2 LINE L2 -2 3311 2557 590 252 19 13 chr5 58764671 58764826 -144320706 + MER5B DNA MER1_type 3 158 -20 221 283 26 78 chr5 58765503 58765694 -144319838 + L2 LINE L2 2933 3113 -159 696 209 0 8 chr5 58765804 58765938 -144319594 - FLAM_A SINE Alu 0 133 1 1959 152 30 3 chr5 58765982 58766284 -144319248 + AluSx SINE Alu 1 310 -2 361 226 50 0 chr5 58766509 58766607 -144318925 - L1M4 LINE L1 -348 5773 5691 1767 189 62 56 chr5 58766613 58767095 -144318437 - MLT1D LTR MaLR 0 505 21 1409 151 48 34 chr5 58767933 58768224 -144317308 + L1MB2 LINE L1 5877 6171 0 812 122 0 81 chr5 58768309 58768457 -144317075 - FLAM_C SINE Alu -1 142 7 323 260 268 0 chr5 58768473 58768600 -144316932 - MIR SINE MIR -74 188 28 5586 134 24 5 chr5 58769398 58770463 -144315069 + L1M2 LINE L1 4383 5472 -721 4843 72 6 3 chr5 58770463 58771067 -144314465 + L1PA13 LINE L1 5531 6155 -8 5586 134 24 5 chr5 58771067 58771095 -144314437 + L1M2 LINE L1 5472 5498 -695 2260 95 7 0 chr5 58771474 58771770 -144313762 - AluSp SINE Alu -15 298 1 1674 162 37 17 chr5 58771773 58772069 -144313463 - AluJb SINE Alu -10 302 1 194 324 40 35 chr5 58772488 58772661 -144312871 - MIR SINE MIR 0 262 89 7634 126 34 2 chr5 58772866 58774060 -144311472 + Tigger3b DNA MER2_type 1 1231 0 22 35 0 0 chr5 58774272 58774301 -144311231 + AT_rich Low_complexity Low_complexity 1 29 0 423 284 131 21 chr5 58774309 58774428 -144311104 - L1ME4a LINE L1 -154 5967 5863 1858 108 63 7 chr5 58774428 58774740 -144310792 + AluSq SINE Alu 1 327 0 423 284 131 21 chr5 58774740 58774855 -144310677 - L1ME4a LINE L1 -258 5863 5706 1745 209 60 62 chr5 58774869 58775004 -144310528 - MLT1D LTR MaLR -2 503 369 2187 99 7 3 chr5 58775004 58775329 -144310203 + AluSx SINE Alu 1 326 0 1745 209 60 62 chr5 58775329 58775695 -144309837 - MLT1D LTR MaLR -136 369 2 1745 171 4 0 chr5 58775737 58776012 -144309520 + AluJo SINE Alu 17 292 -20 533 263 57 36 chr5 58776637 58776831 -144308701 + MIR SINE MIR 16 213 -49 290 198 297 10 chr5 58776962 58777063 -144308469 - MLT1J1 LTR MaLR -29 417 288 444 230 114 0 chr5 58777103 58777276 -144308256 - MLT1J LTR MaLR -275 175 16 369 62 0 0 chr5 58777623 58777671 -144307861 + (TG)n Simple_repeat Simple_repeat 1 48 0 2300 121 0 0 chr5 58779263 58779568 -144305964 - AluSx SINE Alu -7 305 1 242 247 0 14 chr5 58779601 58779674 -144305858 - L1ME4a LINE L1 -1 6120 6049 2352 228 51 19 chr5 58779792 58780358 -144305174 - MLT1G LTR MaLR 0 590 7 22 0 0 0 chr5 58780366 58780388 -144305144 + AT_rich Low_complexity Low_complexity 1 22 0 1838 223 33 24 chr5 58780402 58780859 -144304673 + MLT1C LTR MaLR 6 466 -1 342 271 219 56 chr5 58782442 58782730 -144302802 + MLT1J LTR MaLR 50 299 -212 24 0 0 0 chr5 58783092 58783116 -144302416 + AT_rich Low_complexity Low_complexity 1 24 0 315 0 0 0 chr5 58783152 58783187 -144302345 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr5 58783186 58783209 -144302323 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 1148 132 0 29 chr5 58783209 58783335 -144302197 - AluSg/x SINE Alu -7 305 184 3160 124 97 2 chr5 58783335 58783841 -144301691 + MER41C LTR ERV1 1 554 0 1148 132 0 29 chr5 58783841 58783888 -144301644 - AluSg/x SINE Alu -128 184 137 314 244 74 52 chr5 58784231 58784366 -144301166 - MLT1J LTR MaLR 0 511 374 1009 281 72 41 chr5 58784380 58784797 -144300735 - MLT1G1 LTR MaLR -3 592 163 583 262 18 24 chr5 58784865 58785033 -144300499 - MLT1J LTR MaLR -340 171 5 1045 221 188 33 chr5 58785470 58785687 -144299845 + MLT1G LTR MaLR 94 276 -314 909 233 64 108 chr5 58785687 58785789 -144299743 + MER34 LTR ERV1 1 106 -436 2178 102 27 3 chr5 58785789 58786083 -144299449 - AluSg SINE Alu -8 302 2 909 233 64 108 chr5 58786083 58786543 -144298989 + MER34 LTR ERV1 106 538 -4 1045 221 188 33 chr5 58786543 58786745 -144298787 + MLT1G LTR MaLR 276 578 -12 2213 91 3 0 chr5 58787192 58787525 -144298007 - AluSx SINE Alu 0 334 1 364 213 115 36 chr5 58787925 58788047 -144297485 - MIR SINE MIR -63 145 14 1941 145 7 10 chr5 58789482 58789785 -144295747 + AluJb SINE Alu 1 302 -10 192 77 0 0 chr5 58790498 58790524 -144295008 + (TG)n Simple_repeat Simple_repeat 2 27 0 303 104 0 0 chr5 58790525 58790573 -144294959 + (GA)n Simple_repeat Simple_repeat 2 49 0 1392 131 85 112 chr5 58792891 58793196 -144292336 + AluJo SINE Alu 1 297 -15 771 147 8 16 chr5 58793562 58793691 -144291841 - FLAM_C SINE Alu -5 128 1 547 314 49 0 chr5 58793933 58794118 -144291414 + MIR SINE MIR 15 208 -54 2037 133 13 3 chr5 58794461 58794761 -144290771 - AluSx SINE Alu -7 305 3 2017 168 0 0 chr5 58795425 58795729 -144289803 + AluJo SINE Alu 1 304 -8 2580 47 0 7 chr5 58796137 58796437 -144289095 + AluY SINE Alu 1 298 -13 1519 222 62 21 chr5 58796806 58797180 -144288352 - MSTD LTR MaLR -4 392 4 884 267 135 51 chr5 58798176 58798521 -144287011 + MLT1J LTR MaLR 1 390 -121 2016 211 144 16 chr5 58798521 58798713 -144286819 - MER119 DNA MER1_type 0 583 417 2496 87 0 0 chr5 58798713 58799022 -144286510 - AluY SINE Alu -2 309 1 2016 211 144 16 chr5 58799022 58799342 -144286190 - MER119 DNA MER1_type -166 417 5 884 267 135 51 chr5 58799342 58799426 -144286106 + MLT1J LTR MaLR 390 466 -45 1288 184 145 4 chr5 58800231 58800486 -144285046 - AluJo SINE Alu -11 291 1 205 339 161 0 chr5 58801193 58801323 -144284209 + L2 LINE L2 3122 3272 0 1746 159 0 37 chr5 58801551 58801885 -144283647 - AluJo SINE Alu 0 323 1 292 214 18 0 chr5 58802053 58802109 -144283423 + MLT1I LTR MaLR 63 119 -290 559 192 50 35 chr5 58802180 58802359 -144283173 + MLT1I LTR MaLR 266 409 0 2253 113 0 0 chr5 58803202 58803495 -144282037 - AluSx SINE Alu -19 293 1 2535 216 41 19 chr5 58803785 58804419 -144281113 + L1ME1 LINE L1 4492 5139 -1007 1474 218 81 0 chr5 58804432 58804767 -144280765 + L1ME1 LINE L1 5757 6118 -48 1854 179 16 3 chr5 58804768 58805086 -144280446 + MER68 LTR ERV1 1 322 -240 4460 112 56 30 chr5 58805101 58805632 -144279900 - L1PA16 LINE L1 -9 6157 5603 2310 101 0 3 chr5 58805632 58805929 -144279603 - AluSg SINE Alu -14 296 1 4460 112 56 30 chr5 58805929 58806075 -144279457 - L1PA16 LINE L1 -563 5603 5462 983 221 114 32 chr5 58806090 58806371 -144279161 - MLT1C LTR MaLR 0 467 164 325 285 37 41 chr5 58807012 58807148 -144278384 + MIR SINE MIR 30 137 -71 13656 136 19 8 chr5 58807346 58809547 -144275985 + L1PA10 LINE L1 2180 4406 -1740 473 171 0 0 chr5 58809546 58809622 -144275910 - L1P LINE L1 -2464 3682 3607 * 6794 90 11 14 chr5 58809623 58811408 -144274124 + L1PA10 LINE L1 4383 6165 -3 303 174 22 11 chr5 58811431 58811523 -144274009 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 601 219 140 30 chr5 58811523 58811687 -144273845 - MER63B DNA MER1_type -254 182 1 1472 179 16 39 chr5 58812884 58813192 -144272340 - MER50 LTR ERV1 -1 733 433 1450 111 35 4 chr5 58813180 58813406 -144272126 - MER50 LTR ERV1 -500 234 2 * 180 0 0 0 chr5 58813632 58813652 -144271880 + (TA)n Simple_repeat Simple_repeat 2 21 0 814 211 13 7 chr5 58813652 58813804 -144271728 - FRAM SINE Alu -23 153 1 228 243 159 47 chr5 58814235 58814342 -144271190 - L2 LINE L2 -13 3300 3182 604 281 0 0 chr5 58814391 58814526 -144271006 - L2 LINE L2 0 3313 3179 363 153 9 0 chr5 58814541 58814603 -144270929 + L1M3 LINE L1 5562 5627 -553 3322 165 25 8 chr5 58814605 58815198 -144270334 + L1MB4 LINE L1 5575 6177 -3 443 264 67 91 chr5 58815208 58815607 -144269925 - L2 LINE L2 -211 3102 2717 429 114 57 0 chr5 58815958 58816046 -144269486 - Charlie5 DNA MER1_type -84 2528 2436 1778 166 0 14 chr5 58816065 58816360 -144269172 - AluJo SINE Alu -17 295 5 5058 167 46 42 chr5 58817019 58817510 -144268022 - L1MD2 LINE L1 -1 6358 5870 1961 202 62 15 chr5 58817510 58817911 -144267621 + LTR52 LTR ERVL 2 421 0 5058 167 46 42 chr5 58817911 58818051 -144267481 - L1MD2 LINE L1 -489 5870 5732 1861 142 7 3 chr5 58818051 58818360 -144267172 + AluSx SINE Alu 1 310 0 5058 167 46 42 chr5 58818360 58818814 -144266718 - L1MD2 LINE L1 -627 5732 5267 867 144 0 0 chr5 58818818 58818936 -144266596 - FLAM_C SINE Alu -25 118 1 1112 183 10 10 chr5 58819505 58819707 -144265825 + MER3 DNA MER1_type 8 209 0 182 118 29 0 chr5 58819854 58819888 -144265644 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 521 176 12 0 chr5 58819897 58819982 -144265550 - FLAM_C SINE Alu -21 122 37 3057 102 2 57 chr5 58820155 58820608 -144264924 + MSTA LTR MaLR 1 428 0 1528 171 0 19 chr5 58822264 58822522 -144263010 - AluJo SINE Alu 0 312 60 2187 107 0 19 chr5 58822655 58822963 -144262569 - AluSg SINE Alu -8 302 1 1766 175 84 47 chr5 58823610 58823992 -144261540 - MSTD LTR MaLR 0 396 1 2312 81 13 3 chr5 58824094 58824392 -144261140 - AluSp SINE Alu -8 305 5 1453 171 19 41 chr5 58824925 58825194 -144260338 + AluJb SINE Alu 1 263 -49 555 222 42 48 chr5 58825233 58825422 -144260110 - MIR SINE MIR -6 256 69 196 271 60 90 chr5 58825733 58825899 -144259633 + L2 LINE L2 2906 3066 -206 255 186 0 34 chr5 58826833 58826892 -144258640 - HsTC2 DNA Tc2 -1823 75 19 2071 119 17 3 chr5 58826892 58827187 -144258345 + AluSx SINE Alu 1 299 -13 180 0 0 0 chr5 58827681 58827701 -144257831 + (CAGAA)n Simple_repeat Simple_repeat 1 20 0 807 127 0 45 chr5 58828126 58828260 -144257272 - FLAM_C SINE Alu -1 132 5 2640 113 22 11 chr5 58828393 58828764 -144256768 + THE1C LTR MaLR 1 375 0 270 293 165 0 chr5 58828875 58829008 -144256524 + MIR SINE MIR 65 219 -43 1996 146 0 3 chr5 58829630 58829918 -144255614 + AluJo SINE Alu 1 287 -25 1353 197 108 88 chr5 58830032 58830488 -144255044 - MER4C LTR ERV1 0 465 1 450 305 71 18 chr5 58830735 58830961 -144254571 - LTR33 LTR ERVL -228 293 56 1506 178 120 11 chr5 58831075 58831424 -144254108 - MLT1B LTR MaLR -3 387 1 2094 128 0 10 chr5 58832618 58832914 -144252618 + AluJb SINE Alu 1 293 -19 224 123 55 0 chr5 58832985 58833058 -144252474 + (TA)n Simple_repeat Simple_repeat 1 77 0 482 278 102 11 chr5 58833106 58833293 -144252239 - MIR SINE MIR -22 240 37 1683 244 44 62 chr5 58835581 58836127 -144249405 - MLT1F LTR MaLR -1 541 6 1400 255 43 50 chr5 58836141 58836557 -144248975 + MLT1K LTR MaLR 176 588 0 885 168 8 0 chr5 58836725 58836856 -144248676 - FLAM_C SINE Alu 0 133 2 890 209 107 0 chr5 58836998 58837185 -144248347 + MER20 DNA MER1_type 2 208 -11 683 261 31 10 chr5 58937465 58937660 -144147872 + L3 LINE CR1 1350 1548 -29 5651 132 77 107 chr5 58937660 58939250 -144146282 + pTR5 LTR ERV1 741 2438 0 1133 296 42 9 chr5 58945384 58945718 -144139814 + LTR16A LTR ERVL 106 450 0 1038 242 42 36 chr5 58945851 58946181 -144139351 + HERV16 LTR ERVL 153 484 -4512 326 359 39 26 chr5 58946220 58946376 -144139156 + L2 LINE L2 3077 3234 -38 242 310 0 0 chr5 58946383 58946454 -144139078 + LTR16A1 LTR ERVL 1 71 -386 1038 195 19 5 chr5 58946553 58946763 -144138769 + LTR16A1 LTR ERVL 245 457 0 383 331 29 0 chr5 58946804 58946943 -144138589 - MIR3 SINE MIR -48 160 18 296 221 44 0 chr5 58947826 58947894 -144137638 - L2 LINE L2 -18 3295 3225 188 320 0 0 chr5 58948135 58948185 -144137347 - L2 LINE L2 -40 3232 3183 9293 39 2 1 chr5 58948346 58949416 -144136116 + MER11C LTR ERVK 1 1071 0 383 245 48 107 chr5 58949530 58949820 -144135712 + L2 LINE L2 3022 3294 -19 246 353 8 30 chr5 58950224 58950357 -144135175 - L2 LINE L2 -508 2806 2677 32 26 0 0 chr5 58950527 58950566 -144134966 + AT_rich Low_complexity Low_complexity 1 39 0 1135 105 0 7 chr5 58950733 58950886 -144134646 + AluSq/x SINE Alu 1 152 -161 25 0 0 0 chr5 58951859 58951884 -144133648 + AT_rich Low_complexity Low_complexity 1 25 0 244 194 0 69 chr5 58951889 58951961 -144133571 + L1ME2 LINE L1 5954 6020 -144 1675 136 9 88 chr5 58951961 58952300 -144133232 + AluJb SINE Alu 1 312 0 241 114 0 0 chr5 58952311 58952346 -144133186 + MER3 DNA MER1_type 15 49 -160 288 277 60 12 chr5 58953003 58953086 -144132446 - MER91C DNA MER1_type -21 119 33 2502 173 60 6 chr5 58953426 58953905 -144131627 - MLT1D LTR MaLR 0 505 1 222 319 0 0 chr5 58953939 58954008 -144131524 - L2 LINE L2 -19 3253 3185 347 217 0 66 chr5 58954094 58954200 -144131332 + Charlie8 DNA MER1_type 96 194 -2223 868 287 68 54 chr5 58954380 58954896 -144130636 + Charlie7 DNA MER1_type 67 589 -2023 306 233 206 26 chr5 58955423 58955612 -144129920 - MIR SINE MIR -6 256 34 21 36 0 0 chr5 58956894 58956922 -144128610 + GC_rich Low_complexity Low_complexity 1 28 0 373 235 160 25 chr5 58957323 58957442 -144128090 + L2 LINE L2 3138 3272 0 275 295 142 67 chr5 58958086 58958445 -144127087 + MLT1K LTR MaLR 193 578 -10 735 264 106 24 chr5 58958602 58958848 -144126684 + LTR16C LTR ERVL 71 336 -155 425 166 153 98 chr5 58958958 58959121 -144126411 + MIR SINE MIR 14 185 -77 462 326 53 48 chr5 58960005 58960232 -144125300 + MIR SINE MIR 15 242 -20 458 274 79 24 chr5 58960491 58960655 -144124877 + MIR3 SINE MIR 30 202 -6 252 320 65 39 chr5 58961200 58961353 -144124179 - L2 LINE L2 0 3272 3116 514 230 118 13 chr5 58963704 58963856 -144121676 + MIR SINE MIR 51 218 -44 184 303 71 40 chr5 58965173 58965272 -144120260 - L2 LINE L2 -1112 2202 2101 6884 173 30 8 chr5 58965357 58966678 -144118854 + L1PA13 LINE L1 4162 5516 -647 180 0 0 0 chr5 58966678 58966698 -144118834 + (TAA)n Simple_repeat Simple_repeat 2 21 0 6884 173 30 8 chr5 58966698 58967359 -144118173 + L1PA13 LINE L1 5516 6161 -2 363 194 0 0 chr5 58967623 58967685 -144117847 + MIR3 SINE MIR 137 198 -10 237 83 0 0 chr5 58968462 58968498 -144117034 + (TC)n Simple_repeat Simple_repeat 1 36 0 886 163 14 0 chr5 58968498 58968639 -144116893 - FRAM SINE Alu -6 170 28 1973 171 17 8 chr5 58968736 58969092 -144116440 - MER46B DNA MER2_type 0 236 3 260 284 196 59 chr5 58969134 58969623 -144115909 - L2 LINE L2 -1224 2090 1535 549 227 126 0 chr5 58969823 58969942 -144115590 - MER94 DNA DNA 0 134 1 195 222 0 0 chr5 58969945 58969990 -144115542 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 238 331 72 22 chr5 58970012 58970151 -144115381 - L2 LINE L2 -2107 1207 1062 299 230 143 40 chr5 58970223 58970349 -144115183 + L2 LINE L2 2737 2875 -439 220 246 158 0 chr5 58970869 58970926 -144114606 + L2 LINE L2 2903 2968 -345 272 299 13 0 chr5 58970933 58971010 -144114522 + Tigger5 DNA MER2_type 1 78 -2245 443 213 0 0 chr5 58971013 58971088 -144114444 - Tigger5 DNA MER2_type -6 2317 2243 352 188 0 50 chr5 58971101 58971181 -144114351 + Tigger5 DNA MER2_type 2248 2323 0 501 297 161 4 chr5 58971208 58971457 -144114075 + L2 LINE L2 3013 3300 -13 189 107 0 0 chr5 58971458 58971486 -144114046 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 1334 308 140 31 chr5 58971895 58972573 -144112959 + L2 LINE L2 1529 2344 -970 1753 165 18 75 chr5 58972573 58972960 -144112572 + MLT1A1 LTR MaLR 1 365 0 1334 308 140 31 chr5 58972960 58973245 -144112287 + L2 LINE L2 2344 2597 -717 278 278 28 0 chr5 58973252 58973324 -144112208 + L2 LINE L2 3239 3312 -1 488 172 54 127 chr5 58975190 58975375 -144110157 - L1MA9 LINE L1 -38 6274 6113 186 43 0 0 chr5 58976152 58976175 -144109357 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 331 266 133 9 chr5 58976440 58976553 -144108979 - MIR SINE MIR -7 255 129 1139 192 14 5 chr5 58977012 58977220 -144108312 + MER20 DNA MER1_type 10 219 0 23 0 0 0 chr5 58977542 58977565 -144107967 + AT_rich Low_complexity Low_complexity 1 23 0 1492 124 50 0 chr5 58979606 58979824 -144105708 + MER30 DNA MER1_type 1 229 -1 1040 258 46 85 chr5 58981282 58982100 -144103432 + L2 LINE L2 2510 3310 -3 180 304 137 39 chr5 58982187 58982289 -144103243 - MIR SINE MIR -136 126 15 253 278 56 56 chr5 58983543 58983687 -144101845 - MIR SINE MIR -56 206 63 423 0 0 0 chr5 58983831 58983878 -144101654 + (TG)n Simple_repeat Simple_repeat 2 48 0 362 308 20 0 chr5 58984469 58984615 -144100917 + L2 LINE L2 3161 3309 -4 1188 238 81 57 chr5 58984883 58985353 -144100179 - MLT1H LTR MaLR -12 537 57 392 274 110 14 chr5 58986090 58986236 -144099296 + MIR SINE MIR 47 206 -56 186 217 43 0 chr5 58986369 58986415 -144099117 - MIR SINE MIR -29 233 186 753 285 20 0 chr5 58986428 58986628 -144098904 - MIR SINE MIR -55 207 4 227 320 0 39 chr5 58986740 58986818 -144098714 + MLT1K LTR MaLR 313 387 -201 306 221 10 106 chr5 58988240 58988344 -144097188 + MER94 DNA DNA 25 118 -16 3375 246 84 39 chr5 58988833 58990611 -144094921 - L1M4 LINE L1 -1535 5109 3180 7484 55 10 2 chr5 58990622 58991562 -144093970 + L1PA6 LINE L1 5237 6154 0 3817 133 14 7 chr5 58991611 58992182 -144093350 + L1PA7 LINE L1 10 584 -5877 27886 88 17 5 chr5 58992192 58996916 -144088616 + L1PA7 LINE L1 1685 6468 -1 1848 205 126 65 chr5 58996915 58997633 -144087899 - L1M4 LINE L1 -3454 3190 2517 * 212 0 36 0 chr5 58997633 58997661 -144087871 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1775 143 0 4 chr5 58997664 58997922 -144087610 - AluJb SINE Alu -29 283 27 1848 205 126 65 chr5 58997922 58998441 -144087091 - L1M4 LINE L1 -4128 2516 1856 321 68 0 0 chr5 58998442 58998486 -144087046 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 261 260 31 21 chr5 58998488 58998584 -144086948 - L1M4 LINE L1 -4782 1864 1768 1136 259 30 60 chr5 58998590 58998926 -144086606 - MLT1A2 LTR MaLR 0 374 49 7672 212 25 32 chr5 58998927 59000721 -144084811 - L1M4 LINE L1 -4785 1859 4 282 212 129 0 chr5 59000735 59000820 -144084712 - LTR68 LTR ERV1 -637 103 8 321 172 0 0 chr5 59001240 59001304 -144084228 + (CA)n Simple_repeat Simple_repeat 2 65 0 295 116 0 0 chr5 59001304 59001347 -144084185 - L1P5 LINE L1 -363 5788 5746 869 266 83 96 chr5 59002034 59002170 -144083362 - LTR16C LTR ERVL -14 477 341 2015 145 3 0 chr5 59002170 59002467 -144083065 + AluSx SINE Alu 1 298 -14 869 266 83 96 chr5 59002467 59002811 -144082721 - LTR16C LTR ERVL -150 341 3 424 293 120 37 chr5 59002972 59003062 -144082470 - Charlie8 DNA MER1_type -114 227 146 279 0 0 0 chr5 59003062 59003093 -144082439 + (TG)n Simple_repeat Simple_repeat 2 32 0 424 293 120 37 chr5 59003093 59003193 -144082339 - Charlie8 DNA MER1_type -195 146 21 271 341 16 66 chr5 59003323 59003505 -144082027 - L2 LINE L2 -557 2757 2585 750 298 123 17 chr5 59004351 59004700 -144080832 + LTR16C LTR ERVL 98 483 -8 212 0 36 0 chr5 59004908 59004936 -144080596 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 200 185 25 37 chr5 59006555 59006636 -144078896 + CT-rich Low_complexity Low_complexity 4 83 0 740 219 4 79 chr5 59006793 59007021 -144078511 - L2 LINE L2 -9 3304 3094 * 1414 255 76 49 chr5 59007002 59007516 -144078016 - L2 LINE L2 -410 2904 2377 328 205 98 38 chr5 59007520 59007678 -144077854 + LTR50 LTR ERVL 10 157 -366 519 60 0 0 chr5 59007998 59008065 -144077467 + (TTG)n Simple_repeat Simple_repeat 2 68 0 1161 204 70 62 chr5 59008086 59008444 -144077088 - L2 LINE L2 -938 2376 2016 262 319 18 39 chr5 59008555 59008749 -144076783 + MIR SINE MIR 21 207 -55 293 353 25 0 chr5 59008826 59008948 -144076584 + MIR SINE MIR 33 157 -105 1944 157 12 54 chr5 59009396 59009803 -144075729 - MLT1B LTR MaLR 0 390 1 868 243 197 19 chr5 59010620 59010991 -144074541 - MLT1J2 LTR MaLR -13 437 1 327 270 8 63 chr5 59011773 59011899 -144073633 - MIR3 SINE MIR -4 204 86 420 282 23 109 chr5 59011956 59011989 -144073543 + MIR SINE MIR 25 59 -203 2608 33 0 3 chr5 59011989 59012293 -144073239 - AluY SINE Alu -8 303 1 420 282 23 109 chr5 59012293 59012479 -144073053 + MIR SINE MIR 59 225 -37 600 211 12 84 chr5 59013067 59013112 -144072420 + MER5B DNA MER1_type 8 55 -123 1905 149 30 0 chr5 59013112 59013133 -144072399 - AluJb SINE Alu -6 306 287 198 0 0 0 chr5 59013133 59013155 -144072377 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 1905 149 30 0 chr5 59013155 59013429 -144072103 - AluJb SINE Alu -25 287 2 600 211 12 84 chr5 59013429 59013549 -144071983 + MER5B DNA MER1_type 55 161 -17 2422 145 92 19 chr5 59013636 59014106 -144071426 - MLT1D LTR MaLR -1 504 1 2362 96 3 6 chr5 59014706 59015020 -144070512 - AluSq SINE Alu 0 313 1 362 184 0 12 chr5 59016100 59016246 -144069286 - MER3 DNA MER1_type 0 209 1 449 247 6 77 chr5 59016815 59016985 -144068547 + MIR SINE MIR 53 210 -52 533 204 315 0 chr5 59017387 59017549 -144067983 + AluJb SINE Alu 1 213 -99 545 291 145 28 chr5 59017586 59017868 -144067664 - L1MEc LINE L1 -4229 2167 1853 281 333 132 7 chr5 59018404 59018548 -144066984 + MIR SINE MIR 90 251 -11 403 95 27 0 chr5 59020158 59020232 -144065300 + (TC)n Simple_repeat Simple_repeat 1 76 0 5766 103 30 1 chr5 59020425 59021487 -144064045 + L1PA14 LINE L1 5073 6160 -1 321 233 17 33 chr5 59021537 59021578 -144063954 + (TA)n Simple_repeat Simple_repeat 2 42 -77 665 259 61 0 chr5 59021578 59021775 -144063757 - MER63A DNA MER1_type -1 209 1 321 233 17 33 chr5 59021775 59021810 -144063722 + (TA)n Simple_repeat Simple_repeat 42 76 -43 213 39 0 0 chr5 59021810 59021836 -144063696 + (TG)n Simple_repeat Simple_repeat 2 27 0 321 233 17 33 chr5 59021836 59021878 -144063654 + (TA)n Simple_repeat Simple_repeat 76 119 0 317 352 119 29 chr5 59021931 59022377 -144063155 - L2 LINE L2 -359 2955 2470 2081 104 31 0 chr5 59022446 59022733 -144062799 + AluSx SINE Alu 1 296 -16 582 346 88 48 chr5 59022908 59023507 -144062025 - L2 LINE L2 -2173 1141 519 1311 174 40 119 chr5 59024819 59025215 -144060317 - MLT1A1 LTR MaLR 0 365 1 509 233 55 86 chr5 59026162 59026488 -144059044 - HAL1 LINE L1 -825 1682 1367 2248 125 0 0 chr5 59026580 59026884 -144058648 - AluSc SINE Alu -3 306 3 2093 138 0 3 chr5 59026896 59027193 -144058339 - AluSx SINE Alu -16 296 1 263 247 84 39 chr5 59027267 59027421 -144058111 - L1MEc LINE L1 -5061 1144 984 2151 140 0 0 chr5 59027636 59027936 -144057596 - AluSx SINE Alu -12 300 1 231 133 0 22 chr5 59030277 59030322 -144055210 - MLT1L LTR MaLR -4 611 568 226 295 97 63 chr5 59030634 59030871 -144054661 - MLT1L LTR MaLR -364 251 7 355 330 102 33 chr5 59030942 59031245 -144054287 + L2 LINE L2 2223 2546 -768 371 320 221 9 chr5 59031493 59031809 -144053723 + L2 LINE L2 2890 3272 0 24 32 0 0 chr5 59032498 59032529 -144053003 + AT_rich Low_complexity Low_complexity 1 31 0 1308 253 67 28 chr5 59032838 59033229 -144052303 - LTR16A LTR ERVL -29 421 16 2762 151 42 30 chr5 59034843 59035386 -144050146 - MER21A LTR ERV1 -6 925 376 1135 141 84 4 chr5 59035391 59035618 -144049914 - MER21A LTR ERV1 -667 264 20 276 30 0 0 chr5 59035618 59035651 -144049881 + (TG)n Simple_repeat Simple_repeat 2 34 0 495 310 89 14 chr5 59035905 59036118 -144049414 - L2 LINE L2 -8 3305 3077 571 271 54 0 chr5 59036552 59036718 -144048814 - MIR3 SINE MIR -2 206 32 297 210 40 89 chr5 59037211 59037291 -144048241 + MLT1K LTR MaLR 456 529 -59 1702 155 82 23 chr5 59037291 59037645 -144047887 - THE1C LTR MaLR 0 375 1 297 210 40 89 chr5 59037645 59037688 -144047844 + MLT1K LTR MaLR 529 573 -15 887 241 41 9 chr5 59037930 59038150 -144047382 + MIR SINE MIR 36 262 0 2065 159 40 0 chr5 59039362 59039714 -144045818 - MER47A DNA MER2_type 0 366 1 2427 39 19 3 chr5 59040020 59040329 -144045203 - L1PA4 LINE L1 -1 6154 5841 354 268 0 68 chr5 59040646 59040836 -144044696 - L1MC4 LINE L1 -2 8040 7864 2695 140 55 45 chr5 59041319 59041896 -144043636 + MER34C LTR ERV1 1 583 -2 518 275 37 5 chr5 59041899 59042117 -144043415 + MARNA DNA Mariner 236 460 -126 204 318 54 68 chr5 59043529 59043677 -144041855 - MIR SINE MIR -112 150 5 994 122 12 12 chr5 59044854 59045026 -144040506 - L1MA4A LINE L1 -349 5954 5783 258 60 40 20 chr5 59045031 59045081 -144040451 + (TA)n Simple_repeat Simple_repeat 2 52 0 208 92 8 118 chr5 59045100 59045219 -144040313 + (TA)n Simple_repeat Simple_repeat 2 107 0 1711 85 0 41 chr5 59045219 59045490 -144040042 - L1MA4A LINE L1 -516 5787 5528 2153 137 25 18 chr5 59045490 59045884 -144039648 + L1MA4A LINE L1 5866 6262 -41 679 149 0 0 chr5 59045884 59046005 -144039527 + L1MA4A LINE L1 6180 6300 -3 234 281 35 57 chr5 59046383 59046611 -144038921 - L1ME LINE L1 -297 5824 5602 2058 146 3 0 chr5 59046612 59046906 -144038626 + AluSx SINE Alu 1 295 -17 30 27 0 0 chr5 59046964 59047001 -144038531 + AT_rich Low_complexity Low_complexity 1 37 0 258 300 25 12 chr5 59047059 59047139 -144038393 + MIR3 SINE MIR 101 181 -27 1594 189 18 31 chr5 59047787 59048073 -144037459 + AluJo SINE Alu 1 282 -30 850 175 138 6 chr5 59048220 59048380 -144037152 + MER5A DNA MER1_type 8 188 -1 497 206 11 17 chr5 59048894 59049074 -144036458 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 255 193 35 0 chr5 59049178 59049235 -144036297 + Charlie7 DNA MER1_type 47 105 -2507 * 334 147 136 110 chr5 59049204 59049395 -144036137 + Charlie7 DNA MER1_type 2415 2610 -2 186 291 89 0 chr5 59049554 59049633 -144035899 - MIR3 SINE MIR -109 99 14 29 0 0 0 chr5 59051349 59051378 -144034154 + AT_rich Low_complexity Low_complexity 1 29 0 755 218 34 63 chr5 59052436 59052642 -144032890 + L2 LINE L2 3114 3313 0 342 335 52 7 chr5 59052684 59052839 -144032693 + L3 LINE CR1 1274 1435 -142 262 294 39 0 chr5 59052841 59052943 -144032589 + U6 snRNA snRNA 1 106 -1 33 0 0 0 chr5 59053809 59053842 -144031690 + AT_rich Low_complexity Low_complexity 1 33 0 1155 142 46 0 chr5 59053845 59054064 -144031468 - L1MA7 LINE L1 -5 6286 6058 261 258 0 15 chr5 59056191 59056257 -144029275 + L2 LINE L2 3238 3302 -11 26 74 0 0 chr5 59057005 59057059 -144028473 + AT_rich Low_complexity Low_complexity 1 54 0 217 369 36 48 chr5 59057613 59057781 -144027751 - L3b LINE CR1 -3 1580 1415 327 302 95 0 chr5 59059640 59059756 -144025776 + MIR3 SINE MIR 50 176 -32 535 244 32 0 chr5 59060026 59060149 -144025383 - MIR SINE MIR -49 213 87 988 269 0 8 chr5 59060339 59060577 -144024955 - MIR SINE MIR 0 262 27 238 279 0 38 chr5 59062384 59062463 -144023069 + MIR SINE MIR 63 138 -70 264 318 110 29 chr5 59064463 59064636 -144020896 + MER5A DNA MER1_type 2 188 -1 1628 209 34 40 chr5 59064868 59065179 -144020353 + HsTC2 DNA Tc2 1283 1768 -130 3451 109 0 6 chr5 59065179 59065287 -144020245 + L1PB1 LINE L1 5677 5784 -367 1379 7 22 7 chr5 59065287 59065558 -144019974 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 3451 109 0 6 chr5 59065558 59065925 -144019607 + L1PB1 LINE L1 5784 6150 -1 1628 209 34 40 chr5 59065925 59066057 -144019475 + HsTC2 DNA Tc2 1768 1899 1 192 158 0 0 chr5 59066878 59066916 -144018616 + (CA)n Simple_repeat Simple_repeat 2 39 0 216 97 0 0 chr5 59066923 59066954 -144018578 + (CAA)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr5 59067398 59067435 -144018097 + AT_rich Low_complexity Low_complexity 1 37 0 1676 225 11 11 chr5 59067573 59067924 -144017608 - MLT1A1 LTR MaLR -3 362 12 204 257 14 57 chr5 59068185 59068255 -144017277 + L2 LINE L2 3228 3294 -19 2127 119 0 7 chr5 59068425 59068718 -144016814 - AluSx SINE Alu -21 291 1 335 328 16 8 chr5 59068915 59069096 -144016436 + MIR SINE MIR 21 255 -7 628 255 134 39 chr5 59070885 59071191 -144014341 + LTR33 LTR ERVL 6 340 -181 1705 189 18 0 chr5 59071300 59071586 -144013946 + AluJb SINE Alu 1 291 -21 2151 147 33 25 chr5 59072000 59072361 -144013171 + THE1B LTR MaLR 1 364 0 22458 65 2 10 chr5 59072376 59075924 -144009608 + L1PA6 LINE L1 2608 6151 -3 180 0 0 0 chr5 59076661 59076681 -144008851 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 335 191 96 52 chr5 59078376 59078491 -144007041 + MLT1L LTR MaLR 148 267 -348 552 263 23 23 chr5 59078601 59078772 -144006760 + MLT1L LTR MaLR 445 615 0 242 298 32 0 chr5 59079238 59079332 -144006200 - MER103 DNA DNA -1 165 69 815 187 8 15 chr5 59079348 59079482 -144006050 + FLAM_A SINE Alu 1 133 0 19883 190 29 27 chr5 59079485 59083518 -144002014 + L1M2a LINE L1 5 5119 -2465 207 0 0 0 chr5 59083518 59083541 -144001991 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 19883 190 29 27 chr5 59083541 59084790 -144000742 + L1M2a LINE L1 5119 6364 -1220 3073 107 34 2 chr5 59084788 59085236 -144000296 + L1PA12 LINE L1 5613 6074 -94 * 1572 151 7 28 chr5 59085222 59085507 -144000025 + L1P LINE L1 4526 4804 -1342 * 769 78 0 0 chr5 59085541 59085643 -143999889 - L1PA13 LINE L1 0 6163 6062 33918 64 117 1 chr5 59085691 59091181 -143994351 + L1PA5 LINE L1 11 6149 -5 23 68 0 0 chr5 59091485 59091529 -143994003 + AT_rich Low_complexity Low_complexity 1 44 0 219 69 0 0 chr5 59092093 59092122 -143993410 + (TG)n Simple_repeat Simple_repeat 2 30 0 806 216 35 112 chr5 59093878 59094226 -143991306 - MER5C DNA MER1_type 0 324 4 209 342 143 35 chr5 59094889 59095039 -143990493 + MIR SINE MIR 3 164 -63 234 0 0 0 chr5 59095152 59095178 -143990354 + (CA)n Simple_repeat Simple_repeat 1 26 0 263 234 31 0 chr5 59095653 59095717 -143989815 + MIR SINE MIR 79 144 -118 31 76 0 0 chr5 59095789 59095855 -143989677 + AT_rich Low_complexity Low_complexity 1 66 0 1303 40 0 0 chr5 59096783 59096953 -143988579 + AluY SINE Alu 131 300 0 312 226 89 55 chr5 59097975 59098121 -143987411 + MIR SINE MIR 111 261 -1 241 161 16 32 chr5 59098429 59098491 -143987041 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 225 0 0 0 chr5 59099029 59099054 -143986478 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 593 319 60 17 chr5 59099831 59100066 -143985466 + MIR SINE MIR 8 252 -10 293 316 20 20 chr5 59100334 59100432 -143985100 + MIR3 SINE MIR 6 103 -105 229 324 49 29 chr5 59100579 59100681 -143984851 - MER5A DNA MER1_type -79 110 7 2125 114 0 22 chr5 59101784 59102099 -143983433 + AluSx SINE Alu 2 309 -3 315 0 0 0 chr5 59102373 59102408 -143983124 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1110 190 80 51 chr5 59102412 59102686 -143982846 - AluJo SINE Alu -30 282 1 659 155 0 106 chr5 59102711 59102872 -143982660 + L1MB3 LINE L1 6039 6182 -1 1895 187 52 3 chr5 59104909 59105257 -143980275 - MLT1A1 LTR MaLR 0 365 1 2091 136 0 0 chr5 59105280 59105574 -143979958 + AluJb SINE Alu 1 294 -18 247 191 11 21 chr5 59106295 59106389 -143979143 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 1240 193 4 4 chr5 59107115 59107353 -143978179 - L1MB1 LINE L1 0 6168 5931 2394 74 7 3 chr5 59107803 59108113 -143977419 + AluY SINE Alu 1 311 0 330 302 47 47 chr5 59108152 59108321 -143977211 + MER5A DNA MER1_type 21 189 0 21 0 0 0 chr5 59108799 59108820 -143976712 + AT_rich Low_complexity Low_complexity 1 21 0 1656 219 16 29 chr5 59109877 59110256 -143975276 + MLT1A2 LTR MaLR 1 374 0 743 262 105 76 chr5 59110945 59111289 -143974243 + MLT1J LTR MaLR 156 509 -2 2314 68 0 0 chr5 59111677 59111955 -143973577 - AluY SINE Alu -33 278 1 292 288 117 9 chr5 59112304 59112415 -143973117 - L2 LINE L2 0 3272 3150 2198 121 0 0 chr5 59112932 59113229 -143972303 + AluSx SINE Alu 2 298 -14 753 72 31 0 chr5 59113677 59113774 -143971758 + HY3 scRNA scRNA 1 100 -1 360 339 0 9 chr5 59113837 59113952 -143971580 + L2 LINE L2 3187 3300 -13 287 167 0 51 chr5 59113967 59114045 -143971487 + (TGAA)n Simple_repeat Simple_repeat 2 75 0 1516 223 32 51 chr5 59115032 59115381 -143970151 - LTR16C LTR ERVL 0 491 150 2159 114 90 35 chr5 59115381 59115724 -143969808 + THE1B LTR MaLR 3 364 0 1516 223 32 51 chr5 59115724 59115786 -143969746 - LTR16C LTR ERVL -341 150 88 801 265 51 15 chr5 59116237 59116433 -143969099 - MIR SINE MIR -33 229 27 629 282 26 26 chr5 59116739 59116934 -143968598 + MIR3 SINE MIR 14 208 0 21 36 0 0 chr5 59117237 59117265 -143968267 + AT_rich Low_complexity Low_complexity 1 28 0 1869 212 63 65 chr5 59117381 59118123 -143967409 - L1MC5 LINE L1 -37 7924 7184 550 205 84 99 chr5 59118727 59118839 -143966693 - L1MC5 LINE L1 -1877 5931 5819 955 191 172 0 chr5 59118839 59119043 -143966489 - MER8 DNA MER2_type 0 239 1 550 205 84 99 chr5 59119043 59119193 -143966339 - L1MC5 LINE L1 -1989 5819 5673 235 284 15 15 chr5 59119280 59119347 -143966185 + L2 LINE L2 3242 3308 -5 526 242 74 27 chr5 59119782 59119931 -143965601 + L2 LINE L2 3154 3309 -4 2013 228 167 26 chr5 59119999 59120750 -143964782 - L1MDa LINE L1 -5520 1020 38 234 156 89 0 chr5 59120782 59120827 -143964705 - L1MDa LINE L1 -6475 65 17 535 295 122 80 chr5 59120917 59121388 -143964144 - L2 LINE L2 -1 3271 2790 1407 171 21 0 chr5 59121516 59121755 -143963777 + L1MB1 LINE L1 5921 6164 -4 21 0 0 0 chr5 59121757 59121778 -143963754 + AT_rich Low_complexity Low_complexity 1 21 0 4769 151 111 14 chr5 59122451 59123448 -143962084 - L1MDa LINE L1 -4407 2133 1040 2700 124 3 3 chr5 59123455 59123819 -143961713 - THE1B LTR MaLR 0 364 1 834 278 25 49 chr5 59123871 59124198 -143961334 - Charlie8 DNA MER1_type -2044 373 55 1628 181 86 18 chr5 59125144 59125470 -143960062 + MER7A DNA MER2_type 1 346 0 264 155 0 35 chr5 59125666 59125724 -143959808 - MER4-int LTR ERV1 -5435 1163 1108 186 280 0 0 chr5 59125748 59125823 -143959709 + (CA)n Simple_repeat Simple_repeat 1 75 0 649 280 51 0 chr5 59125835 59126010 -143959522 + MIR SINE MIR 25 208 -54 257 315 14 27 chr5 59126846 59126919 -143958613 - MIR SINE MIR -124 84 13 2105 101 69 36 chr5 59127270 59127789 -143957743 - MER51A LTR ERV1 0 634 1 1339 181 68 4 chr5 59128095 59128344 -143957188 + MER63B DNA MER1_type 1 265 -171 1557 161 0 0 chr5 59128346 59128587 -143956945 - Tigger2 DNA MER2_type -1 2717 2474 2288 112 0 6 chr5 59128587 59128901 -143956631 + AluSx SINE Alu 1 312 0 4481 152 17 22 chr5 59128981 59129278 -143956254 - Tigger2 DNA MER2_type -1961 757 460 2088 113 3 3 chr5 59129278 59129587 -143955945 - AluSq SINE Alu 0 309 1 4481 152 17 22 chr5 59129587 59130049 -143955483 - Tigger2 DNA MER2_type -2258 460 1 802 175 21 0 chr5 59130049 59130192 -143955340 + MER63B DNA MER1_type 289 434 0 1781 242 42 5 chr5 59132190 59132595 -143952937 - LTR16C LTR ERVL 0 491 72 4131 167 22 14 chr5 59132875 59133607 -143951925 + L1MB3 LINE L1 5446 6183 0 23 0 0 0 chr5 59133613 59133636 -143951896 + AT_rich Low_complexity Low_complexity 1 23 0 185 314 0 43 chr5 59134109 59134179 -143951353 + L2 LINE L2 3206 3272 0 195 294 118 15 chr5 59134689 59134757 -143950775 + L2 LINE L2 3153 3227 -45 184 283 0 0 chr5 59134807 59134853 -143950679 + MIR SINE MIR 47 92 -116 204 156 0 0 chr5 59136329 59136361 -143949171 - L2 LINE L2 -17 3255 3224 1015 240 59 52 chr5 59136869 59137310 -143948222 - L1MCa LINE L1 -5108 1318 875 192 275 73 79 chr5 59137523 59137701 -143947831 + L2 LINE L2 442 618 -2696 432 136 11 34 chr5 59137701 59137789 -143947743 - L1MB8 LINE L1 0 6178 6093 2964 164 76 4 chr5 59137815 59138357 -143947175 - L1MB4 LINE L1 -15 6165 5585 492 247 171 17 chr5 59138151 59138390 -143947142 - L1PA6 LINE L1 -329 5825 5550 * 751 227 176 62 chr5 59138391 59138743 -143946789 + L2 LINE L2 644 1035 -2279 1246 96 0 0 chr5 59138744 59138932 -143946600 - AluSg/x SINE Alu 0 313 126 1622 254 64 11 chr5 59138932 59139388 -143946144 + L2 LINE L2 1028 1507 -1807 1406 211 159 15 chr5 59139519 59139744 -143945788 - L2 LINE L2 -2263 1051 860 930 131 162 61 chr5 59139744 59139942 -143945590 - MER20 DNA MER1_type -1 218 1 1406 211 159 15 chr5 59139942 59140175 -143945357 - L2 LINE L2 -2454 860 527 187 244 73 0 chr5 59140195 59140236 -143945296 - MIR SINE MIR -132 76 33 2191 104 0 19 chr5 59140888 59141206 -143944326 + AluSx SINE Alu 1 312 0 35 24 0 0 chr5 59141531 59141573 -143943959 + AT_rich Low_complexity Low_complexity 1 42 0 326 316 117 12 chr5 59141715 59141765 -143943767 + MIR SINE MIR 62 105 -157 2175 135 3 0 chr5 59141765 59142076 -143943456 - AluSx SINE Alu 0 312 1 326 316 117 12 chr5 59142076 59142196 -143943336 + MIR SINE MIR 105 250 -12 286 216 14 0 chr5 59143820 59143894 -143941638 + G-rich Low_complexity Low_complexity 3 77 0 2767 29 0 3 chr5 59145224 59145536 -143939996 + AluY SINE Alu 1 311 0 907 161 87 59 chr5 59145538 59145792 -143939740 - Charlie1 DNA MER1_type -1 2760 2500 2465 150 110 6 chr5 59145806 59146279 -143939253 - L1MB3 LINE L1 0 6183 5662 227 270 5 43 chr5 59150873 59151058 -143934474 + (CAAA)n Simple_repeat Simple_repeat 3 180 0 200 293 17 33 chr5 59151026 59151207 -143934325 + A-rich Low_complexity Low_complexity 2 179 0 * 650 200 48 0 chr5 59151379 59151524 -143934008 - MER63 DNA MER1_type 0 1062 911 * 2490 145 45 0 chr5 59151521 59151969 -143933563 + Tigger2 DNA MER2_type 5 472 -2246 1246 150 88 7 chr5 59151971 59152245 -143933287 + AluSq SINE Alu 1 296 -7 225 0 0 0 chr5 59156424 59156449 -143929083 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 13918 31 29 0 chr5 59157060 59159549 -143925983 + L1PA4 LINE L1 3597 6152 -3 464 250 40 26 chr5 59160096 59160248 -143925284 + AluSg/x SINE Alu 139 292 -17 431 241 68 19 chr5 59160393 59160555 -143924977 + L2 LINE L2 1532 1701 -1613 482 94 0 0 chr5 59160558 59160622 -143924910 + Alu SINE Alu 236 299 -12 226 259 136 41 chr5 59161162 59161309 -143924223 + L2 LINE L2 2730 2890 -424 447 19 0 0 chr5 59161579 59161631 -143923901 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 186 393 74 0 chr5 59161665 59161787 -143923745 + L2 LINE L2 3142 3272 0 307 148 93 65 chr5 59162133 59162241 -143923291 - L1ME4a LINE L1 -25 6096 5986 1487 99 19 33 chr5 59162256 59162467 -143923065 + L1PA10 LINE L1 5950 6157 -11 525 312 80 79 chr5 59163365 59164202 -143921330 - ERVL LTR ERVL -201 5326 4447 1635 177 0 24 chr5 59164285 59164579 -143920953 + AluJo SINE Alu 1 287 -25 441 232 20 0 chr5 59164640 59164739 -143920793 - ERVL LTR ERVL -1384 4270 4170 261 244 58 12 chr5 59164810 59164896 -143920636 - ERVL LTR ERVL -1576 4188 4099 807 230 55 8 chr5 59164923 59165180 -143920352 - L2 LINE L2 -2280 1034 766 1387 153 5 5 chr5 59165440 59165663 -143919869 + MLT1D LTR MaLR 282 504 -1 301 281 124 77 chr5 59165665 59166132 -143919400 - L1ME LINE L1 -351 5770 5282 301 333 20 20 chr5 59166193 59166346 -143919186 - L1ME LINE L1 -969 5177 5025 2148 121 14 0 chr5 59167265 59167555 -143917977 + AluSx SINE Alu 1 294 -18 321 27 0 0 chr5 59167618 59167655 -143917877 + L1PA2 LINE L1 6107 6143 -12 572 243 175 17 chr5 59167741 59167918 -143917614 - MIR SINE MIR -44 218 14 473 278 112 11 chr5 59168181 59168368 -143917164 + MIR SINE MIR 51 256 -6 1083 136 7 0 chr5 59168455 59168609 -143916923 - AluSg/x SINE Alu -18 292 138 44274 42 5 3 chr5 59169159 59175302 -143910230 - L1PA4 LINE L1 -3 6152 1 1374 67 67 6 chr5 59175860 59176040 -143909492 - AluY SINE Alu -79 232 42 511 262 101 18 chr5 59176667 59176835 -143908697 + MER5A DNA MER1_type 8 189 0 274 222 49 49 chr5 59177642 59177723 -143907809 - L1ME4a LINE L1 -76 6045 5965 5674 79 10 1 chr5 59177818 59178500 -143907032 - LTR12 LTR ERV1 0 688 1 4739 103 8 0 chr5 59178500 59179138 -143906394 - HERV9 LTR ERV1 0 8399 7757 466 98 0 76 chr5 59179133 59179171 -143906361 - HERV17 LTR ERV1 -5176 1720 1681 * 2566 89 148 5 chr5 59179171 59179563 -143905969 + LTR7 LTR ERV1 1 448 -2 466 98 0 76 chr5 59179563 59179616 -143905916 - HERV17 LTR ERV1 -5215 1681 1636 * 2089 101 28 33 chr5 59179614 59179693 -143905839 - HERV17 LTR ERV1 -3381 4404 4326 1606 38 5 0 chr5 59179693 59179878 -143905654 + L1PA4 LINE L1 5966 6151 -4 2089 101 28 33 chr5 59179878 59180540 -143904992 - HERV17 LTR ERV1 -3459 4326 708 * 6333 103 11 12 chr5 59180507 59181403 -143904129 - HERV17 LTR ERV1 -3425 4974 4080 15487 109 12 9 chr5 59181406 59184563 -143900969 - HERV17 LTR ERV1 -5257 3142 59 2418 83 162 179 chr5 59184542 59185182 -143900350 - LTR12 LTR ERV1 -130 584 20 * 282 162 162 0 chr5 59185195 59185263 -143900269 + MER116 DNA Mariner 1 79 -1 225 132 0 0 chr5 59185672 59185710 -143899822 + (TG)n Simple_repeat Simple_repeat 2 39 0 390 147 0 0 chr5 59186765 59186833 -143898699 + (CA)n Simple_repeat Simple_repeat 2 69 0 857 272 64 21 chr5 59186988 59187419 -143898113 - MER90 LTR ERV1 -6 569 14 282 335 68 48 chr5 59187606 59187854 -143897678 - L2 LINE L2 -425 2889 2637 1459 160 16 8 chr5 59187931 59188187 -143897345 + AluJo SINE Alu 6 263 -49 304 297 0 0 chr5 59188187 59188261 -143897271 + AluJ/FRAM SINE Alu 229 302 0 484 273 72 36 chr5 59188449 59188643 -143896889 + L2 LINE L2 3107 3307 -6 31450 102 19 37 chr5 59190293 59195162 -143890370 + L1P LINE L1 2 4781 -1365 635 174 9 0 chr5 59195162 59195261 -143890271 + L1MB7 LINE L1 6066 6175 -9 787 171 0 0 chr5 59196694 59196811 -143888721 + FLAM_A SINE Alu 1 117 -16 1946 115 0 0 chr5 59197575 59197836 -143887696 + AluSc SINE Alu 36 296 -13 2222 96 3 3 chr5 59199505 59199896 -143885636 + AluSx SINE Alu 1 391 0 1007 124 129 27 chr5 59200364 59200550 -143884982 - MER3 DNA MER1_type -4 205 1 348 75 0 19 chr5 59200587 59200640 -143884892 - L1MA4 LINE L1 -6 6294 6243 24 67 0 0 chr5 59203430 59203475 -143882057 + AT_rich Low_complexity Low_complexity 1 45 0 352 194 40 0 chr5 59204574 59204698 -143880834 + (TA)n Simple_repeat Simple_repeat 2 130 0 712 208 36 30 chr5 59204821 59204989 -143880543 - MER5B DNA MER1_type -5 173 5 1929 267 75 7 chr5 59205181 59205783 -143879749 + L1ME3 LINE L1 5520 6162 0 21 36 0 0 chr5 59205783 59205811 -143879721 + AT_rich Low_complexity Low_complexity 1 28 0 235 313 31 0 chr5 59206892 59206956 -143878576 - MIR SINE MIR -113 95 30 239 317 0 0 chr5 59207303 59207363 -143878169 + L2 LINE L2 3213 3272 0 246 351 0 0 chr5 59207541 59207615 -143877917 + GA-rich Low_complexity Low_complexity 3 76 0 274 286 9 76 chr5 59207691 59207796 -143877736 - MIR SINE MIR -63 199 102 1087 238 189 23 chr5 59208111 59208544 -143876988 - MLT1D LTR MaLR 0 505 1 296 48 24 0 chr5 59209458 59209500 -143876032 + (CA)n Simple_repeat Simple_repeat 1 43 0 453 301 15 37 chr5 59209579 59209715 -143875817 - MIR3 SINE MIR -52 156 24 21 0 0 0 chr5 59209761 59209782 -143875750 + AT_rich Low_complexity Low_complexity 1 21 0 808 191 86 0 chr5 59209838 59209990 -143875542 + FAM SINE Alu 3 167 -8 1430 166 5 0 chr5 59210025 59210242 -143875290 - AluJb SINE Alu -9 303 86 422 240 142 31 chr5 59210912 59211137 -143874395 + MER112 DNA MER1_type 8 257 -3 2274 114 0 13 chr5 59211413 59211728 -143873804 + AluSx SINE Alu 1 311 -1 633 250 56 6 chr5 59212467 59212647 -143872885 + L2 LINE L2 3124 3312 -1 21 57 0 0 chr5 59214646 59214681 -143870851 + AT_rich Low_complexity Low_complexity 1 35 0 411 297 62 31 chr5 59214842 59215037 -143870495 - L1ME4a LINE L1 -187 5934 5734 850 208 0 12 chr5 59215846 59216014 -143869518 - AluJb SINE Alu -10 302 137 854 248 131 83 chr5 59216035 59216600 -143868932 + MLT1F1 LTR MaLR 1 592 -3 29 47 0 0 chr5 59216956 59216999 -143868533 + AT_rich Low_complexity Low_complexity 1 43 0 946 289 72 29 chr5 59217790 59218208 -143867324 + MLT1K LTR MaLR 146 581 -7 667 261 133 34 chr5 59219370 59219604 -143865928 + MIR SINE MIR 6 262 0 1758 106 117 25 chr5 59219797 59220071 -143865461 + AluSg SINE Alu 1 299 -11 233 206 65 120 chr5 59220195 59220235 -143865297 + MIR3 SINE MIR 119 160 -48 588 220 125 0 chr5 59220235 59220403 -143865129 + MER5A DNA MER1_type 1 189 0 233 206 65 120 chr5 59220403 59220454 -143865078 + MIR3 SINE MIR 160 205 -3 445 215 158 38 chr5 59221064 59221222 -143864310 - MER5B DNA MER1_type 0 178 2 611 225 56 170 chr5 59222851 59224000 -143861532 + L1ME LINE L1 519 1536 -4994 583 260 95 57 chr5 59224029 59224421 -143861111 + L1ME LINE L1 1791 2215 -4325 1669 173 0 58 chr5 59224421 59224750 -143860782 + AluJb SINE Alu 1 310 -2 583 260 95 57 chr5 59224750 59224956 -143860576 + L1ME LINE L1 2215 2412 -4128 1120 266 91 55 chr5 59224964 59225366 -143860166 - L2 LINE L2 -1152 2162 1741 2030 118 40 20 chr5 59225366 59225662 -143859870 + AluSx SINE Alu 3 304 -8 1120 266 91 55 chr5 59225662 59225710 -143859822 - L2 LINE L2 -1573 1741 1696 194 387 36 9 chr5 59226410 59226521 -143859011 + L2 LINE L2 2941 3054 -218 260 182 0 0 chr5 59227613 59227668 -143857864 - L1MC1 LINE L1 -408 5925 5871 1549 167 104 0 chr5 59228062 59228332 -143857200 + AluJb SINE Alu 1 298 -14 2816 131 39 0 chr5 59228333 59228800 -143856732 + L1MC1 LINE L1 5842 6326 -7 237 65 0 0 chr5 59228832 59228863 -143856669 + (GA)n Simple_repeat Simple_repeat 2 32 0 1543 100 22 26 chr5 59229230 59229460 -143856072 - MER30 DNA MER1_type -1 229 1 2290 88 0 14 chr5 59229532 59229827 -143855705 - AluSg SINE Alu -19 291 1 24 0 0 0 chr5 59229829 59229853 -143855679 + AT_rich Low_complexity Low_complexity 1 24 0 2069 146 3 0 chr5 59229862 59230157 -143855375 + AluSx SINE Alu 4 299 -13 2228 112 37 0 chr5 59230487 59230783 -143854749 + AluSx SINE Alu 1 307 -5 423 333 136 58 chr5 59231252 59231715 -143853817 + HAL1 LINE L1 13 511 -1996 2007 120 7 0 chr5 59231763 59232037 -143853495 - AluSx SINE Alu -31 281 6 1350 246 105 31 chr5 59232192 59232890 -143852642 + HAL1 LINE L1 903 1651 -856 514 264 136 44 chr5 59232931 59233343 -143852189 + HAL1 LINE L1 1806 2282 -225 1721 121 4 12 chr5 59233343 59233592 -143851940 + AluSx SINE Alu 19 265 -47 514 264 136 44 chr5 59233592 59233725 -143851807 + HAL1 LINE L1 2282 2401 -106 26 0 0 0 chr5 59233800 59233826 -143851706 + AT_rich Low_complexity Low_complexity 1 26 0 2304 143 152 80 chr5 59234634 59235207 -143850325 - LTR18B LTR ERVL 0 614 1 978 173 126 0 chr5 59235358 59235549 -143849983 - MER20 DNA MER1_type 0 219 5 21 36 0 0 chr5 59238637 59238665 -143846867 + AT_rich Low_complexity Low_complexity 1 28 0 192 125 0 0 chr5 59239303 59239346 -143846186 + (TCC)n Simple_repeat Simple_repeat 1 43 0 207 204 0 0 chr5 59239567 59239611 -143845921 + (TA)n Simple_repeat Simple_repeat 2 45 0 641 193 180 60 chr5 59239705 59240005 -143845527 + MER57A LTR ERV1 64 399 -4 21 57 0 0 chr5 59240540 59240575 -143844957 + AT_rich Low_complexity Low_complexity 1 35 0 272 186 47 15 chr5 59240593 59240858 -143844674 + (TA)n Simple_repeat Simple_repeat 1 273 0 211 171 48 0 chr5 59240882 59240987 -143844545 + (TA)n Simple_repeat Simple_repeat 1 110 0 270 253 41 7 chr5 59241030 59241176 -143844356 + (TA)n Simple_repeat Simple_repeat 1 151 0 496 246 26 9 chr5 59241353 59241467 -143844065 - MIR3 SINE MIR -5 203 88 598 241 145 35 chr5 59241620 59241961 -143843571 + L1ME LINE L1 5270 5648 -473 1696 169 58 3 chr5 59241972 59242267 -143843265 + AluJb SINE Alu 1 311 -1 696 271 74 13 chr5 59242293 59242522 -143843010 - MIR SINE MIR -3 259 17 2953 194 44 35 chr5 59242674 59243392 -143842140 + L1MB5 LINE L1 5409 6136 -38 2317 106 6 6 chr5 59243392 59243703 -143841829 + AluSq SINE Alu 1 311 -2 2953 194 44 35 chr5 59243703 59243735 -143841797 + L1MB5 LINE L1 6136 6166 -8 1914 156 7 3 chr5 59244278 59244586 -143840946 - AluJb SINE Alu -3 309 1 346 269 30 15 chr5 59244740 59244874 -143840658 - Charlie8 DNA MER1_type -2258 159 24 217 342 36 9 chr5 59245233 59245344 -143840188 + L2 LINE L2 2946 3059 -213 1531 206 98 52 chr5 59245378 59245858 -143839674 + MLT1D LTR MaLR 3 504 -1 379 374 11 0 chr5 59245916 59246098 -143839434 - MIR SINE MIR -10 252 69 273 242 16 0 chr5 59246133 59246195 -143839337 + MER91 DNA MER1_type 78 140 0 1970 167 0 0 chr5 59246497 59246808 -143838724 + AluJb SINE Alu 1 311 -1 1347 300 58 70 chr5 59247119 59247777 -143837755 + L3 LINE CR1 571 1219 -358 1689 166 16 16 chr5 59247777 59248085 -143837447 + AluJb SINE Alu 1 308 -4 1347 300 58 70 chr5 59248085 59248250 -143837282 + L3 LINE CR1 1219 1384 -193 23 54 0 0 chr5 59248360 59248397 -143837135 + AT_rich Low_complexity Low_complexity 1 37 0 259 174 105 35 chr5 59248419 59248505 -143837027 - MER113 DNA MER1_type? -429 92 1 202 250 18 0 chr5 59248614 59248670 -143836862 + A-rich Low_complexity Low_complexity 2 58 0 2374 114 34 6 chr5 59249508 59249860 -143835672 - THE1B LTR MaLR 0 364 3 2155 137 0 0 chr5 59250136 59250443 -143835089 + AluSg SINE Alu 1 307 -3 498 269 154 0 chr5 59251630 59251786 -143833746 - MER5A DNA MER1_type -4 185 6 1517 176 39 20 chr5 59252553 59252859 -143832673 - AluJb SINE Alu 0 312 1 576 242 108 16 chr5 59255412 59255598 -143829934 + MIR SINE MIR 23 225 -37 214 231 39 0 chr5 59255571 59255623 -143829909 - MIR SINE MIR 0 262 209 * 198 0 0 0 chr5 59255633 59255655 -143829877 + (A)n Simple_repeat Simple_repeat 1 22 0 2231 108 3 0 chr5 59255655 59255951 -143829581 + AluSx SINE Alu 1 297 -15 826 262 74 16 chr5 59256423 59256667 -143828865 + MIR SINE MIR 5 262 0 741 144 24 16 chr5 59256779 59256904 -143828628 + FLAM_C SINE Alu 1 126 -7 482 160 0 0 chr5 59256949 59257024 -143828508 + AluSg/x SINE Alu 105 179 -133 2114 120 3 10 chr5 59257040 59257348 -143828184 - AluSq SINE Alu -7 306 1 565 133 0 0 chr5 59257826 59257909 -143827623 - AluSg/x SINE Alu -19 291 209 417 253 45 21 chr5 59259265 59259417 -143826115 + MIR3 SINE MIR 38 195 -13 2079 118 3 37 chr5 59260288 59260611 -143824921 + AluSx SINE Alu 1 312 0 317 228 114 44 chr5 59260957 59261071 -143824461 + MER63 DNA MER1_type 2 749 -313 1688 167 0 14 chr5 59261122 59261415 -143824117 + AluJb SINE Alu 5 293 -19 761 175 0 0 chr5 59261420 59261534 -143823998 + AluJb SINE Alu 131 244 -68 1567 148 8 4 chr5 59262256 59262519 -143823013 + L1PA16 LINE L1 5887 6150 -16 2566 43 0 3 chr5 59263372 59263674 -143821858 + AluY SINE Alu 1 301 -10 2200 117 3 0 chr5 59264572 59264870 -143820662 + AluSx SINE Alu 1 299 -13 1987 134 0 14 chr5 59265148 59265440 -143820092 - AluJo SINE Alu -19 293 6 216 313 42 62 chr5 59265447 59265591 -143819941 + L3b LINE CR1 1125 1265 -318 180 0 0 0 chr5 59266290 59266310 -143819222 + (T)n Simple_repeat Simple_repeat 1 20 0 33 90 0 0 chr5 59266829 59266918 -143818614 + GC_rich Low_complexity Low_complexity 1 89 0 189 0 0 0 chr5 59267784 59267805 -143817727 + (A)n Simple_repeat Simple_repeat 1 21 0 2251 203 54 23 chr5 59268628 59269199 -143816333 + L1MC4a LINE L1 7220 7808 0 21 36 0 0 chr5 59270061 59270089 -143815443 + GC_rich Low_complexity Low_complexity 1 28 0 201 333 33 22 chr5 59271304 59271394 -143814138 - L2 LINE L2 -1 3312 3222 2548 49 0 0 chr5 59271451 59271757 -143813775 - AluY SINE Alu -5 306 1 281 351 88 88 chr5 59271892 59272220 -143813312 + L2 LINE L2 2914 3241 -31 451 325 46 0 chr5 59272399 59272550 -143812982 + MIR SINE MIR 59 216 -46 211 196 0 0 chr5 59272683 59272729 -143812803 + L2 LINE L2 3264 3309 -4 369 304 70 9 chr5 59273118 59273233 -143812299 + MIR3 SINE MIR 65 186 -22 769 201 98 5 chr5 59273635 59273819 -143811713 - LTR40c LTR ERVL -262 203 3 712 195 60 54 chr5 59273927 59274112 -143811420 + MIR SINE MIR 5 190 -72 2153 132 7 0 chr5 59274125 59274429 -143811103 + AluSx SINE Alu 1 306 -6 1583 191 68 33 chr5 59274460 59274884 -143810648 + L1ME1 LINE L1 5715 6153 -13 217 49 0 49 chr5 59275973 59276014 -143809518 + (TTTTTA)n Simple_repeat Simple_repeat 4 42 0 240 215 0 46 chr5 59276597 59276662 -143808870 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 23 0 0 0 chr5 59276744 59276767 -143808765 + AT_rich Low_complexity Low_complexity 1 23 0 2155 136 43 3 chr5 59276944 59277290 -143808242 - MLT1A1 LTR MaLR -4 361 2 305 194 14 0 chr5 59277382 59277454 -143808078 - MER93a LTR ERV1 0 402 330 2328 99 0 0 chr5 59277860 59278163 -143807369 + AluSc SINE Alu 1 303 -6 603 319 93 14 chr5 59278178 59278457 -143807075 + L3 LINE CR1 903 1203 -374 697 89 0 0 chr5 59278482 59278572 -143806960 - 5S rRNA rRNA -31 90 1 205 289 271 25 chr5 59278626 59278951 -143806581 + L2 LINE L2 1474 1878 -1436 226 359 109 8 chr5 59278993 59279121 -143806411 + L3 LINE CR1 1018 1158 -419 705 234 49 34 chr5 59279304 59279509 -143806023 + MER63A DNA MER1_type 2 209 -1 2588 37 0 0 chr5 59279516 59279814 -143805718 - AluY SINE Alu -13 298 1 698 240 0 0 chr5 59279962 59280091 -143805441 - FRAM SINE Alu -47 129 1 191 309 0 0 chr5 59280108 59280150 -143805382 + L2 LINE L2 3210 3251 -21 1350 177 20 10 chr5 59280205 59280505 -143805027 - MER33 DNA MER1_type -5 319 17 1112 186 5 29 chr5 59281132 59281336 -143804196 + AluJo SINE Alu 1 199 -113 280 111 37 0 chr5 59281831 59281885 -143803647 + GA-rich Low_complexity Low_complexity 2 57 0 220 292 0 0 chr5 59282866 59282914 -143802618 - L3b LINE CR1 -344 1239 1192 339 96 0 0 chr5 59283282 59283334 -143802198 + (TA)n Simple_repeat Simple_repeat 1 52 0 2154 113 7 3 chr5 59283565 59283867 -143801665 - AluSq SINE Alu -10 303 1 589 254 62 37 chr5 59284337 59284581 -143800951 - MIR SINE MIR 0 262 13 3995 170 34 3 chr5 59284648 59285413 -143800119 - L1MB8 LINE L1 0 6178 5390 1109 185 37 86 chr5 59285413 59285798 -143799734 + MLT1A1 LTR MaLR 1 457 0 739 200 34 6 chr5 59286260 59286435 -143799097 - L1ME3 LINE L1 -1 6161 5982 187 250 0 0 chr5 59286663 59286703 -143798829 + L2 LINE L2 3141 3180 -92 2114 121 7 0 chr5 59287415 59287713 -143797819 + AluSx SINE Alu 1 300 -12 714 150 0 25 chr5 59287940 59288060 -143797472 - AluJb SINE Alu -19 293 177 806 151 0 0 chr5 59288549 59288668 -143796864 + FRAM SINE Alu 38 156 -20 1870 164 0 3 chr5 59289462 59289760 -143795772 - AluJb SINE Alu -11 301 5 2314 100 3 0 chr5 59289944 59290244 -143795288 + AluSg SINE Alu 1 301 -9 2179 109 3 20 chr5 59290432 59290736 -143794796 + AluSx SINE Alu 1 299 -13 223 289 105 0 chr5 59291402 59291478 -143794054 + MIR SINE MIR 63 146 -62 2432 158 114 76 chr5 59291767 59292475 -143793057 + L1MC3 LINE L1 7044 7778 -7 595 241 0 8 chr5 59292720 59292853 -143792679 + FLAM_C SINE Alu 2 133 0 694 194 181 14 chr5 59292934 59293150 -143792382 - L1M4 LINE L1 -1946 4200 3949 763 252 49 47 chr5 59293163 59293592 -143791940 + L1ME2 LINE L1 1888 2317 -4079 1246 176 100 8 chr5 59293593 59293843 -143791689 + AluJo SINE Alu 23 295 -17 837 254 114 7 chr5 59293844 59294247 -143791285 + L1ME2 LINE L1 2322 2734 -3481 1490 207 26 36 chr5 59294250 59294404 -143791128 + AluJo SINE Alu 1 152 -160 207 0 0 0 chr5 59294404 59294427 -143791105 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1490 207 26 36 chr5 59294427 59294581 -143790951 + AluJo SINE Alu 152 306 -6 853 183 21 3 chr5 59294581 59294857 -143790675 + L1MC1 LINE L1 2320 2643 -3947 3298 136 55 55 chr5 59294859 59295577 -143789955 + L1MA9 LINE L1 4843 5559 -753 2491 56 0 7 chr5 59295577 59295880 -143789652 + AluY SINE Alu 1 301 -10 3298 136 55 55 chr5 59295880 59295950 -143789582 + L1MA9 LINE L1 5559 5627 -685 1852 120 0 39 chr5 59295950 59296234 -143789298 + AluSg SINE Alu 1 273 -37 1434 6 6 11 chr5 59296235 59296412 -143789120 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 3298 136 55 55 chr5 59296412 59296730 -143788802 + L1MA9 LINE L1 5626 5948 -364 * 5846 178 31 39 chr5 59296718 59297323 -143788209 + L1MC1 LINE L1 4443 5051 -1562 2112 134 0 7 chr5 59297323 59297629 -143787903 + AluSx SINE Alu 1 304 -8 5846 178 31 39 chr5 59297629 59298030 -143787502 + L1MC1 LINE L1 5051 5454 -1159 2047 115 47 0 chr5 59298030 59298309 -143787223 + AluSx SINE Alu 2 293 -19 5846 178 31 39 chr5 59298309 59299050 -143786482 + L1MC1 LINE L1 5454 6168 -445 2044 110 14 0 chr5 59299050 59299493 -143786039 + AluSq SINE Alu 2 448 0 5846 178 31 39 chr5 59299493 59299931 -143785601 + L1MC1 LINE L1 6168 6608 -5 1215 98 6 0 chr5 59300012 59300186 -143785346 + LTR9 LTR ERV1 438 612 0 2423 158 22 4 chr5 59300188 59300643 -143784889 + HUERS-P3 LTR ERV1 3 465 -8454 485 105 35 12 chr5 59300655 59300741 -143784791 + LTR9 LTR ERV1 410 497 -115 1156 217 43 3 chr5 59301133 59301455 -143784077 + L1ME2 LINE L1 3904 4238 -1977 307 177 0 25 chr5 59301476 59301555 -143783977 + GA-rich Low_complexity Low_complexity 3 79 0 3680 203 44 63 chr5 59301570 59302352 -143783180 + L1ME2 LINE L1 4244 5039 -1194 2425 88 0 0 chr5 59302352 59302647 -143782885 + AluSx SINE Alu 1 295 -17 3680 203 44 63 chr5 59302647 59303396 -143782136 + L1ME2 LINE L1 5039 5731 -502 468 0 0 0 chr5 59303396 59303448 -143782084 + (TA)n Simple_repeat Simple_repeat 2 53 0 3680 203 44 63 chr5 59303448 59303800 -143781732 + L1ME2 LINE L1 5731 6088 -145 459 78 0 0 chr5 59303831 59303895 -143781637 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 207 0 0 0 chr5 59303897 59303920 -143781612 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1357 193 66 8 chr5 59303920 59304179 -143781353 - AluJo SINE Alu -38 274 1 532 165 6 112 chr5 59304179 59304349 -143781183 + L1MB8 LINE L1 6026 6177 -1 2311 106 0 0 chr5 59305306 59305607 -143779925 + AluSx SINE Alu 1 301 -11 910 150 0 0 chr5 59305617 59305750 -143779782 + AluSq/x SINE Alu 1 133 -179 1418 239 47 19 chr5 59306179 59306606 -143778926 + MLT1E2 LTR MaLR 188 626 0 232 261 14 58 chr5 59306639 59306777 -143778755 + L1ME4a LINE L1 5978 6109 -12 258 286 71 62 chr5 59307259 59307331 -143778201 + MLT1J LTR MaLR 226 296 -319 2441 74 7 3 chr5 59307331 59307640 -143777892 + AluSg SINE Alu 1 310 0 258 286 71 62 chr5 59307640 59307840 -143777692 + MLT1J LTR MaLR 296 490 -125 2003 103 10 58 chr5 59308390 59308760 -143776772 - AluSx SINE Alu 0 312 1 1941 102 0 0 chr5 59309009 59309263 -143776269 + AluSq SINE Alu 57 310 -3 2091 127 0 19 chr5 59309354 59309670 -143775862 - AluSx SINE Alu -2 310 1 928 179 50 0 chr5 59309714 59309893 -143775639 + MER5A DNA MER1_type 1 188 -1 2209 119 3 0 chr5 59309970 59310273 -143775259 - AluSq SINE Alu -9 304 1 422 266 128 35 chr5 59310296 59310522 -143775010 + L2 LINE L2 3025 3271 -42 2641 217 60 40 chr5 59310644 59311252 -143774280 - MER21B LTR ERV1 -62 801 176 1792 121 23 62 chr5 59311252 59311559 -143773973 - AluSx SINE Alu -17 295 1 2641 217 60 40 chr5 59311559 59311654 -143773878 - MER21B LTR ERV1 -687 176 84 523 179 0 47 chr5 59311657 59311763 -143773769 + FLAM_C SINE Alu 7 107 -36 357 250 25 0 chr5 59311764 59311844 -143773688 - MER21B LTR ERV1 -770 93 12 294 216 98 39 chr5 59311899 59312052 -143773480 + L2 LINE L2 3152 3313 0 198 0 0 0 chr5 59313019 59313041 -143772491 + (A)n Simple_repeat Simple_repeat 1 22 0 358 252 74 22 chr5 59314888 59315023 -143770509 + MIR SINE MIR 113 254 -8 307 161 16 0 chr5 59315047 59315109 -143770423 + L1PB4 LINE L1 6091 6153 -3 37 0 0 21 chr5 59315110 59315132 -143770400 + AT_rich Low_complexity Low_complexity 1 22 -25 2327 110 3 0 chr5 59315132 59315441 -143770091 + AluSx SINE Alu 1 310 -2 37 0 0 21 chr5 59315441 59315466 -143770066 + AT_rich Low_complexity Low_complexity 22 47 0 296 169 15 0 chr5 59316603 59316668 -143768864 + L1PB4 LINE L1 6091 6156 0 1918 161 3 28 chr5 59318406 59318723 -143766809 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 59320595 59320617 -143764915 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 59320925 59320961 -143764571 + GC_rich Low_complexity Low_complexity 1 36 0 292 270 112 62 chr5 59323078 59323175 -143762357 - MIR SINE MIR -13 249 158 2637 56 0 0 chr5 59323175 59323480 -143762052 - AluY SINE Alu -6 305 1 292 270 112 62 chr5 59323480 59323560 -143761972 - MIR SINE MIR -104 158 63 367 287 147 0 chr5 59324031 59324160 -143761372 + MIR SINE MIR 99 246 -16 274 182 36 0 chr5 59326304 59326359 -143759173 - MIR SINE MIR -119 143 87 216 233 35 40 chr5 59326363 59326481 -143759051 + MIR SINE MIR 35 146 -62 2185 111 0 23 chr5 59328548 59328855 -143756677 + AluSx SINE Alu 1 300 -12 2301 81 17 3 chr5 59329152 59329447 -143756085 - AluSp SINE Alu -14 299 1 2362 99 0 0 chr5 59329452 59329746 -143755786 - AluSc SINE Alu -15 294 1 264 254 109 9 chr5 59329777 59329887 -143755645 + MIR SINE MIR 34 154 -108 2137 111 3 0 chr5 59330006 59330303 -143755229 - AluSx SINE Alu -14 298 1 243 213 100 12 chr5 59330490 59330570 -143754962 - L2 LINE L2 -49 3223 3137 412 191 66 52 chr5 59330631 59330767 -143754765 + MER53 DNA DNA 4 141 -48 457 115 81 0 chr5 59330773 59330860 -143754672 + MER53 DNA DNA 96 189 0 1883 180 3 0 chr5 59330978 59331289 -143754243 + AluJb SINE Alu 1 312 0 325 239 165 0 chr5 59331295 59331404 -143754128 - L2 LINE L2 -619 2695 2569 1529 218 33 15 chr5 59332188 59332583 -143752949 - L2 LINE L2 -1 3312 2911 287 135 0 115 chr5 59332651 59332717 -143752815 + Charlie5 DNA MER1_type 2505 2558 -66 2014 144 10 0 chr5 59332717 59333009 -143752523 + AluSx SINE Alu 1 295 -17 287 135 0 115 chr5 59333009 59333038 -143752494 + Charlie5 DNA MER1_type 2558 2589 -35 1292 138 18 37 chr5 59333039 59333256 -143752276 + AluJo SINE Alu 83 295 -17 270 146 0 0 chr5 59333256 59333297 -143752235 + Charlie5 DNA MER1_type 2544 2584 -28 2480 78 3 0 chr5 59333312 59333620 -143751912 + AluSg1 SINE Alu 1 309 0 1423 254 38 16 chr5 59333727 59333867 -143751665 - L2 LINE L2 -683 2631 2495 1723 152 35 28 chr5 59333867 59334156 -143751376 + AluJo SINE Alu 1 291 -21 1423 254 38 16 chr5 59334156 59334440 -143751092 - L2 LINE L2 -819 2495 2198 566 264 70 15 chr5 59335499 59335700 -143749832 + MIR SINE MIR 2 213 -49 1605 108 95 54 chr5 59335967 59336263 -143749269 - AluJb SINE Alu -4 308 1 2401 98 0 0 chr5 59337025 59337322 -143748210 + AluSc SINE Alu 1 297 -12 274 32 0 0 chr5 59337411 59337442 -143748090 - U2 snRNA snRNA -157 31 1 301 256 139 8 chr5 59337447 59337576 -143747956 + L1MC4a LINE L1 5255 5400 -2408 660 261 132 62 chr5 59337625 59337943 -143747589 + L1MC4a LINE L1 5512 5541 -701 1933 157 3 7 chr5 59337943 59338249 -143747283 - AluSx SINE Alu -7 305 1 660 261 132 62 chr5 59338249 59338366 -143747166 + L1MC4a LINE L1 5541 5648 -594 2287 131 48 62 chr5 59338717 59339151 -143746381 + MSTA LTR MaLR 1 428 0 735 261 126 0 chr5 59339281 59339542 -143745990 - L2 LINE L2 -216 3097 2804 457 261 87 6 chr5 59339625 59339786 -143745746 - MIR SINE MIR -88 174 1 399 315 156 8 chr5 59340506 59340744 -143744788 - L2 LINE L2 -11 3302 3030 3639 178 60 11 chr5 59341710 59342526 -143743006 - L1 LINE L1 -1328 4818 3963 694 144 36 7 chr5 59342522 59342661 -143742871 - L1M4 LINE L1 -816 5330 5188 * 2124 122 0 22 chr5 59342664 59342975 -143742557 - AluSx SINE Alu 0 312 9 4227 61 13 2 chr5 59342975 59343499 -143742033 + MER41A LTR ERV1 25 554 0 225 152 0 0 chr5 59343499 59343530 -143742002 - AluSx SINE Alu -271 31 1 256 175 0 35 chr5 59343531 59343588 -143741944 - L1M4 LINE L1 -945 5201 5147 1856 176 76 5 chr5 59343596 59343977 -143741555 - L1MA9 LINE L1 -2 6310 5903 852 144 39 0 chr5 59343986 59344139 -143741393 - L1M4 LINE L1 -984 5162 5004 1899 168 0 3 chr5 59344167 59344465 -143741067 - AluJb SINE Alu -15 297 1 672 201 86 86 chr5 59344465 59344674 -143740858 - L1M4 LINE L1 -1130 5016 4808 368 206 0 0 chr5 59344681 59344744 -143740788 - Tigger5 DNA MER2_type -4 2319 2257 * 793 185 15 0 chr5 59344743 59344878 -143740654 - Tigger5 DNA MER2_type -2183 140 4 1522 208 7 10 chr5 59344924 59345213 -143740319 - AluJb SINE Alu -18 294 7 1586 164 106 137 chr5 59345218 59345804 -143739728 + LTR49 LTR ERV1 24 591 -4 304 220 184 0 chr5 59345875 59345984 -143739548 + MIR SINE MIR 117 245 -17 2354 92 3 0 chr5 59346066 59346360 -143739172 - AluSx SINE Alu -17 295 1 751 267 135 4 chr5 59347263 59347700 -143737832 + MER68 LTR ERV1 3 558 -4 316 242 217 0 chr5 59347865 59347985 -143737547 - L2 LINE L2 -1 3312 3167 511 296 195 12 chr5 59348111 59348449 -143737083 - L2 LINE L2 -354 2960 2561 569 158 53 53 chr5 59348635 59348768 -143736764 + MIR SINE MIR 66 198 -64 21 0 0 0 chr5 59349027 59349048 -143736484 + AT_rich Low_complexity Low_complexity 1 21 0 1014 164 12 12 chr5 59350913 59351078 -143734454 - FRAM SINE Alu -1 165 1 444 239 157 0 chr5 59351689 59351848 -143733684 + L1MC5 LINE L1 7260 7443 -518 219 323 63 16 chr5 59351926 59352053 -143733479 - MER5B DNA MER1_type -45 133 1 293 185 0 0 chr5 59352090 59352144 -143733388 - AluJo SINE Alu -3 299 246 1190 152 10 10 chr5 59352145 59352342 -143733190 - AluJo SINE Alu -115 197 1 234 260 0 0 chr5 59352462 59352512 -143733020 + (CATA)n Simple_repeat Simple_repeat 1 50 0 724 213 0 0 chr5 59352512 59352634 -143732898 - FLAM_A SINE Alu -11 122 1 23 0 0 0 chr5 59352634 59352657 -143732875 + AT_rich Low_complexity Low_complexity 1 23 0 2278 96 3 10 chr5 59352943 59353246 -143732286 - AluSq SINE Alu -12 301 1 2360 82 0 3 chr5 59353727 59354020 -143731512 - AluSg SINE Alu -18 292 1 504 132 66 44 chr5 59354032 59354168 -143731364 - L1MB8 LINE L1 0 6178 6040 312 305 58 40 chr5 59354440 59354663 -143730869 + MIR SINE MIR 12 238 -24 850 139 0 16 chr5 59357528 59357657 -143727875 + FLAM_C SINE Alu 1 127 -6 1664 200 63 123 chr5 59357983 59358749 -143726783 + L1MC5 LINE L1 6711 7430 -531 1134 197 167 60 chr5 59358894 59359463 -143726069 + L1MC5 LINE L1 7299 7928 -33 2352 101 3 0 chr5 59359505 59359811 -143725721 - AluSg1 SINE Alu -2 307 1 1996 78 4 0 chr5 59359820 59360065 -143725467 - AluSp SINE Alu -8 305 60 1598 174 50 14 chr5 59360136 59360418 -143725114 - AluJo SINE Alu -8 304 13 262 236 0 0 chr5 59360531 59360586 -143724946 - L2 LINE L2 -8 3305 3251 25 0 0 0 chr5 59360832 59360857 -143724675 + AT_rich Low_complexity Low_complexity 1 25 0 29 78 0 0 chr5 59361448 59361512 -143724020 + AT_rich Low_complexity Low_complexity 1 64 0 1252 139 4 48 chr5 59361928 59362158 -143723374 - AluJo SINE Alu -6 306 87 32 26 0 0 chr5 59362516 59362555 -143722977 + AT_rich Low_complexity Low_complexity 1 39 0 1582 111 9 0 chr5 59362560 59362777 -143722755 + AluSg/x SINE Alu 85 303 -9 1246 190 9 0 chr5 59363487 59363703 -143721829 - MER20 DNA MER1_type 0 219 2 2115 114 17 7 chr5 59364861 59365159 -143720373 + AluSx SINE Alu 1 301 -11 212 167 61 106 chr5 59365162 59365228 -143720304 - MIR SINE MIR -110 152 90 23 54 0 0 chr5 59365303 59365340 -143720192 + AT_rich Low_complexity Low_complexity 1 37 0 2228 81 0 42 chr5 59365963 59366271 -143719261 + AluSq SINE Alu 1 295 -18 224 245 0 0 chr5 59366357 59366406 -143719126 + MIR SINE MIR 44 92 -116 2212 116 3 3 chr5 59367317 59367618 -143717914 + AluSx SINE Alu 1 301 -11 1544 170 24 24 chr5 59367632 59367921 -143717611 + AluJo SINE Alu 9 297 -15 477 62 0 0 chr5 59369238 59369303 -143716229 + (TATG)n Simple_repeat Simple_repeat 4 68 0 185 32 0 65 chr5 59369303 59369334 -143716198 + (TCTA)n Simple_repeat Simple_repeat 3 31 0 2197 122 0 0 chr5 59371145 59371440 -143714092 + AluSx SINE Alu 10 304 -8 600 271 124 5 chr5 59371830 59372040 -143713492 + MIR SINE MIR 9 243 -19 194 360 101 0 chr5 59372030 59372119 -143713413 - L2 LINE L2 -36 3236 3139 * 710 332 79 53 chr5 59372364 59373008 -143712524 - L2 LINE L2 -447 2867 2207 1475 165 3 71 chr5 59373020 59373217 -143712315 - AluJb SINE Alu -12 300 132 260 70 23 0 chr5 59373217 59373260 -143712272 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1475 165 3 71 chr5 59373260 59373384 -143712148 - AluJb SINE Alu -180 132 1 1984 125 54 60 chr5 59374155 59374524 -143711008 + LTR26 LTR ERV1 1 367 -236 206 170 0 21 chr5 59374546 59374593 -143710939 + (CA)n Simple_repeat Simple_repeat 2 47 0 188 132 0 26 chr5 59374630 59374668 -143710864 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 71 0 0 chr5 59375149 59375191 -143710341 + AT_rich Low_complexity Low_complexity 1 42 0 2338 107 0 0 chr5 59375298 59375598 -143709934 - AluSq SINE Alu -13 300 1 670 261 82 10 chr5 59377583 59377778 -143707754 + MIR SINE MIR 54 262 0 1104 157 71 25 chr5 59378344 59378542 -143706990 + AluJo SINE Alu 86 292 -20 2367 77 3 3 chr5 59379485 59379784 -143705748 + AluY SINE Alu 1 299 -12 194 356 40 10 chr5 59380097 59380198 -143705334 + L2 LINE L2 2818 2921 -393 578 201 250 6 chr5 59380198 59380362 -143705170 - MER3 DNA MER1_type -5 204 1 251 326 157 19 chr5 59380389 59380650 -143704882 + L2 LINE L2 2947 3243 -70 2104 118 3 0 chr5 59380672 59380961 -143704571 + AluSx SINE Alu 1 290 -22 2077 126 30 0 chr5 59381179 59381481 -143704051 + AluSx SINE Alu 1 311 -1 2095 117 27 0 chr5 59381481 59381781 -143703751 + AluSq SINE Alu 1 308 -5 213 135 22 101 chr5 59381880 59381969 -143703563 + (CTATA)n Simple_repeat Simple_repeat 3 84 0 25 0 0 0 chr5 59382158 59382183 -143703349 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr5 59382976 59383008 -143702524 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr5 59383177 59383204 -143702328 + AT_rich Low_complexity Low_complexity 1 27 0 1214 230 117 0 chr5 59383314 59383614 -143701918 + MER58B DNA MER1_type 5 339 -2 342 250 45 45 chr5 59383922 59384078 -143701454 + L1ME LINE L1 5581 5736 -385 2239 110 0 0 chr5 59384245 59384536 -143700996 + AluSx SINE Alu 1 291 -21 4895 136 14 10 chr5 59385039 59385846 -143699686 - L1MB3 LINE L1 -29 6154 5345 308 261 68 90 chr5 59386445 59386679 -143698853 - L1ME4a LINE L1 -6 6115 5887 1564 177 42 53 chr5 59386682 59387043 -143698489 - L1ME4a LINE L1 -403 5763 5407 277 164 15 15 chr5 59387069 59387136 -143698396 - L1ME4a LINE L1 -860 5286 5220 456 275 126 12 chr5 59387337 59387504 -143698028 - MIR SINE MIR 0 262 77 2214 81 3 19 chr5 59387905 59388212 -143697320 + AluY SINE Alu 1 302 -9 459 224 276 9 chr5 59388461 59388739 -143696793 + MLT1H LTR MaLR 203 532 -17 236 280 93 27 chr5 59389979 59390129 -143695403 - L1ME4a LINE L1 0 6121 5962 562 275 47 10 chr5 59390146 59390339 -143695193 - L1ME4a LINE L1 -240 5881 5682 494 258 118 34 chr5 59390381 59390576 -143694956 + MIR SINE MIR 39 247 -15 21 0 0 0 chr5 59390946 59390967 -143694565 + AT_rich Low_complexity Low_complexity 1 21 0 234 317 19 9 chr5 59391174 59391248 -143694284 + MER5A DNA MER1_type 30 116 -73 2903 6 0 0 chr5 59392261 59392575 -143692957 + AluYb8 SINE Alu 1 314 -4 904 173 65 128 chr5 59392950 59393350 -143692182 - MLT1B LTR MaLR -5 385 11 1463 158 113 91 chr5 59393447 59393602 -143691930 - Charlie1b DNA MER1_type -2244 517 367 1713 147 32 42 chr5 59393602 59393887 -143691645 + AluJo SINE Alu 1 282 -30 1463 158 113 91 chr5 59393887 59393904 -143691628 - Charlie1b DNA MER1_type -2394 367 352 2108 123 3 0 chr5 59393904 59394197 -143691335 + AluSx SINE Alu 1 294 -18 1463 158 113 91 chr5 59394197 59394326 -143691206 - Charlie1b DNA MER1_type -2409 352 227 1485 201 28 55 chr5 59394326 59394723 -143690809 - MLT1B LTR MaLR -4 386 1 1463 158 113 91 chr5 59394723 59394925 -143690607 - Charlie1b DNA MER1_type -2534 227 1 2539 74 3 0 chr5 59394944 59395255 -143690277 + AluSp SINE Alu 1 312 -1 1159 120 141 5 chr5 59395933 59396125 -143689407 + AluJb SINE Alu 85 302 -10 270 203 58 14 chr5 59396848 59396917 -143688615 - L2 LINE L2 -82 3231 3160 194 317 0 0 chr5 59397025 59397085 -143688447 + L2 LINE L2 2682 2741 -573 290 359 43 0 chr5 59397143 59397260 -143688272 + L2 LINE L2 2849 2970 -343 209 116 0 23 chr5 59397640 59397683 -143687849 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 450 265 80 40 chr5 59397696 59397822 -143687710 + L2 LINE L2 2891 3029 -284 2306 59 48 3 chr5 59397822 59398112 -143687420 - AluY SINE Alu -8 303 1 450 265 80 40 chr5 59398112 59398185 -143687347 + L2 LINE L2 3029 3098 -215 185 335 61 41 chr5 59398965 59399162 -143686370 - L2 LINE L2 -508 2806 2606 221 321 36 0 chr5 59399221 59399305 -143686227 - L2 LINE L2 -903 2411 2325 390 285 63 131 chr5 59399713 59400201 -143685331 + L2 LINE L2 2810 3264 -8 211 154 51 0 chr5 59401346 59401385 -143684147 + GA-rich Low_complexity Low_complexity 1 41 0 188 231 200 0 chr5 59401919 59401984 -143683548 + L2 LINE L2 3234 3311 -2 454 253 84 7 chr5 59402066 59402220 -143683312 + MIR SINE MIR 93 258 -4 2161 107 10 0 chr5 59403841 59404140 -143681392 + AluSx SINE Alu 1 302 -10 1466 200 7 17 chr5 59404304 59404594 -143680938 - AluJo SINE Alu -25 287 1 237 235 250 0 chr5 59404651 59404787 -143680745 - L1MC5 LINE L1 -76 7885 7716 541 223 68 81 chr5 59404794 59405117 -143680415 - L1MC5 LINE L1 -297 7664 7346 1271 192 45 0 chr5 59405132 59405419 -143680113 + MER33 DNA MER1_type 1 300 -24 814 243 57 20 chr5 59405565 59405845 -143679687 - L1MC4a LINE L1 -629 7508 7252 354 200 50 0 chr5 59405969 59406049 -143679483 - L1ME1 LINE L1 -96 6070 5987 740 196 90 0 chr5 59406066 59406255 -143679277 - L1ME1 LINE L1 -226 5938 5733 1240 279 183 32 chr5 59406288 59406668 -143678864 - L1MC4a LINE L1 -915 7173 6852 1727 166 7 13 chr5 59406668 59406970 -143678562 + AluJb SINE Alu 1 300 -12 1240 279 183 32 chr5 59406970 59407770 -143677762 - L1MC4a LINE L1 -1236 6852 5815 1486 244 37 39 chr5 59407770 59408228 -143677304 + MLT1D LTR MaLR 1 457 -48 2090 158 47 3 chr5 59408228 59408550 -143676982 - MER1B DNA MER1_type 0 339 4 389 125 0 0 chr5 59408551 59408607 -143676925 + MLT1D LTR MaLR 571 626 0 329 237 132 0 chr5 59408609 59408723 -143676809 - L1MC4a LINE L1 -2271 5817 5689 23 0 0 0 chr5 59409022 59409045 -143676487 + AT_rich Low_complexity Low_complexity 1 23 0 268 157 0 0 chr5 59409289 59409340 -143676192 + FRAM/FAM SINE Alu 1 51 -124 10483 176 20 1 chr5 59409430 59412290 -143673242 + L1PA14 LINE L1 3271 6158 -3 1340 176 99 95 chr5 59412422 59412906 -143672626 - L1MC4 LINE L1 0 8042 7557 404 256 131 36 chr5 59413457 59413594 -143671938 - MIR3 SINE MIR -5 203 54 2322 77 10 10 chr5 59413732 59414029 -143671503 - AluY SINE Alu -14 297 1 458 230 243 21 chr5 59414048 59414287 -143671245 - L1ME3A LINE L1 -28 6142 5851 1834 201 57 11 chr5 59414319 59414776 -143670756 + Charlie1 DNA MER1_type 2284 2761 0 535 205 11 8 chr5 59414786 59414929 -143670603 - L1MC4a LINE L1 -736 5708 5562 259 299 61 7 chr5 59414961 59415108 -143670424 - L1MC4a LINE L1 -1074 5352 5198 2001 145 10 0 chr5 59415116 59415420 -143670112 - AluSx SINE Alu -5 307 1 1768 148 17 10 chr5 59416941 59417232 -143668300 - AluJb SINE Alu -19 293 1 213 315 79 11 chr5 59417841 59417930 -143667602 + MIR SINE MIR 12 106 -156 2474 80 0 3 chr5 59417947 59418258 -143667274 - AluSg SINE Alu 0 310 1 295 257 29 86 chr5 59418259 59418399 -143667133 + MIR SINE MIR 88 219 -43 1994 125 12 56 chr5 59418842 59419162 -143666370 - AluSx SINE Alu -6 306 1 1766 128 29 32 chr5 59419162 59419466 -143666066 - L1PA16 LINE L1 -38 6128 5824 2358 105 0 9 chr5 59419627 59419942 -143665590 + AluSx SINE Alu 1 312 0 4376 74 13 3 chr5 59420210 59420808 -143664724 - L1PA7 LINE L1 0 6154 5551 21 0 0 0 chr5 59421485 59421506 -143664026 + AT_rich Low_complexity Low_complexity 1 21 0 329 292 83 14 chr5 59421811 59421955 -143663577 + MIR SINE MIR 109 262 0 808 215 85 94 chr5 59422398 59422738 -143662794 - L1MC4a LINE L1 -1932 4494 4158 1289 165 12 40 chr5 59422738 59422986 -143662546 - AluJo SINE Alu -71 241 1 485 258 77 14 chr5 59423030 59423380 -143662152 - L1MCa LINE L1 -4545 1881 1399 613 191 52 148 chr5 59423429 59423600 -143661932 - L1MCa LINE L1 -5161 1446 1260 1579 171 18 7 chr5 59423600 59423874 -143661658 - AluJo SINE Alu -21 291 15 613 191 52 148 chr5 59423874 59424121 -143661411 - L1MCa LINE L1 -5347 1260 1068 * 3492 252 72 26 chr5 59424116 59425499 -143660033 - L1MEc LINE L1 -4934 1462 17 366 214 359 15 chr5 59425591 59425722 -143659810 + MER5A DNA MER1_type 9 184 -5 1316 212 124 33 chr5 59425978 59426341 -143659191 - MSTD LTR MaLR 0 396 1 684 154 70 19 chr5 59426452 59426608 -143658924 - L1MCa LINE L1 -5483 1124 961 559 113 0 12 chr5 59427175 59427255 -143658277 + L1M4 LINE L1 5565 5643 -535 2738 162 76 13 chr5 59427325 59427851 -143657681 + L1MB5 LINE L1 5606 6164 -10 371 287 99 20 chr5 59428100 59428302 -143657230 - L1ME1 LINE L1 -5 6972 6755 * 3811 230 98 27 chr5 59428286 59430140 -143655392 - L1ME1 LINE L1 -441 6536 4557 678 256 0 35 chr5 59430140 59430312 -143655220 + MER8 DNA MER2_type 1 166 -73 719 244 85 0 chr5 59430345 59430591 -143654941 - L1ME1 LINE L1 -2402 4555 4289 1767 171 24 0 chr5 59430635 59430809 -143654723 - AluJb SINE Alu -12 300 115 197 33 33 0 chr5 59430809 59430839 -143654693 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1767 171 24 0 chr5 59430839 59430956 -143654576 - AluJb SINE Alu -197 115 2 455 210 183 38 chr5 59430973 59431235 -143654297 - L1ME1 LINE L1 -3097 3860 3561 434 253 130 77 chr5 59431222 59431653 -143653879 - L1ME1 LINE L1 -4137 3001 2548 * 738 276 101 33 chr5 59431698 59432293 -143653239 - L1ME1 LINE L1 -4712 2245 1638 2070 151 0 3 chr5 59432293 59432604 -143652928 - AluSx SINE Alu -2 310 1 738 276 101 33 chr5 59432604 59432659 -143652873 - L1ME1 LINE L1 -5319 1638 1588 379 183 75 25 chr5 59432660 59432780 -143652752 - L1ME1 LINE L1 -5403 1456 1331 2319 92 0 3 chr5 59434088 59434394 -143651138 - AluY SINE Alu -6 305 1 1358 157 74 87 chr5 59435407 59435719 -143649813 - AluJb SINE Alu -4 308 1 427 335 6 28 chr5 59437094 59437270 -143648262 + MER5A DNA MER1_type 18 189 0 2759 154 60 72 chr5 59438863 59439177 -143646355 - L1MB7 LINE L1 -19 6165 5849 2060 133 3 3 chr5 59439177 59439479 -143646053 - AluSx SINE Alu -10 302 1 2759 154 60 72 chr5 59439479 59439833 -143645699 - L1MB7 LINE L1 -335 5849 5505 1704 180 96 18 chr5 59439971 59440510 -143645022 - L1MB7 LINE L1 -654 5530 4971 181 298 0 21 chr5 59441149 59441196 -143644336 - MIR SINE MIR -157 105 60 324 70 0 0 chr5 59441197 59441240 -143644292 - MSTD LTR MaLR 0 457 415 2200 117 28 31 chr5 59441240 59441600 -143643932 - THE1B LTR MaLR -5 359 1 1401 200 62 32 chr5 59441600 59441939 -143643593 - MSTD LTR MaLR -42 354 6 244 278 89 0 chr5 59442438 59442528 -143643004 + MIR SINE MIR 113 210 -52 1875 162 0 7 chr5 59442698 59443001 -143642531 - AluJb SINE Alu -11 301 1 733 256 30 6 chr5 59443550 59443718 -143641814 - MER5B DNA MER1_type 0 178 7 2070 119 17 0 chr5 59444763 59445057 -143640475 + AluSp SINE Alu 1 299 -14 956 139 126 0 chr5 59445355 59445506 -143640026 - AluSx SINE Alu -14 298 129 290 0 80 0 chr5 59445515 59445565 -143639967 + T-rich Low_complexity Low_complexity 1 54 0 867 111 56 0 chr5 59445565 59445691 -143639841 - AluSx SINE Alu -179 133 1 28 29 0 0 chr5 59446496 59446531 -143639001 + AT_rich Low_complexity Low_complexity 1 35 0 1803 161 0 0 chr5 59446941 59447215 -143638317 + AluJo SINE Alu 9 282 -30 600 99 0 0 chr5 59451568 59451649 -143633883 + AluY SINE Alu 2 82 -229 3622 163 29 29 chr5 59453439 59454170 -143631362 - L1MB8 LINE L1 0 6178 5448 560 303 78 0 chr5 59454408 59454550 -143630982 - MIR SINE MIR -108 154 2 21 0 0 0 chr5 59455001 59455022 -143630510 + AT_rich Low_complexity Low_complexity 1 21 0 1579 88 0 15 chr5 59455065 59455270 -143630262 - AluSq SINE Alu -111 202 1 838 134 0 15 chr5 59455271 59455405 -143630127 - AluJo/FLAM SINE Alu -170 132 1 1894 140 3 53 chr5 59455417 59455739 -143629793 - AluJb SINE Alu 0 312 7 2266 119 0 0 chr5 59455863 59456173 -143629359 - AluSx SINE Alu -2 310 1 341 250 156 12 chr5 59457263 59457423 -143628109 + MIR SINE MIR 77 259 -3 229 265 0 15 chr5 59458168 59458236 -143627296 - L2 LINE L2 -682 2632 2566 386 277 11 0 chr5 59458447 59458541 -143626991 + MER94 DNA DNA 16 110 -24 2233 93 14 0 chr5 59459228 59459519 -143626013 + AluY SINE Alu 3 297 -14 1136 199 5 9 chr5 59459739 59459950 -143625582 + AluJo SINE Alu 21 230 -82 294 275 29 0 chr5 59459962 59460031 -143625501 - MLT1I LTR MaLR -325 84 14 2263 92 0 3 chr5 59460717 59461012 -143624520 + AluSc SINE Alu 1 294 -15 292 181 75 105 chr5 59461357 59461490 -143624042 - L1ME4a LINE L1 -12 6109 5981 2149 104 7 7 chr5 59461680 59461978 -143623554 + AluSx SINE Alu 1 298 -14 243 191 32 16 chr5 59461991 59462054 -143623478 - L1ME4a LINE L1 -292 5829 5766 854 176 159 0 chr5 59462109 59462279 -143623253 - AluJb SINE Alu -17 295 99 49 18 0 0 chr5 59462607 59462663 -143622869 + AT_rich Low_complexity Low_complexity 1 56 0 376 215 79 53 chr5 59463182 59463421 -143622111 + LTR56 LTR ERV1 5 293 -144 2260 102 6 16 chr5 59463421 59463735 -143621797 - AluSp SINE Alu -2 311 1 376 215 79 53 chr5 59463735 59463884 -143621648 + LTR56 LTR ERV1 293 437 0 283 220 140 10 chr5 59464669 59464769 -143620763 + MIR SINE MIR 113 225 -37 363 258 48 40 chr5 59465955 59466079 -143619453 - MIR SINE MIR -24 238 114 887 211 114 0 chr5 59466164 59466401 -143619131 + L1M4 LINE L1 4901 5164 -982 462 18 0 0 chr5 59466405 59466460 -143619072 + (TG)n Simple_repeat Simple_repeat 2 56 0 337 253 21 53 chr5 59466460 59466555 -143618977 + MER21A LTR ERV1 33 124 -807 246 81 0 0 chr5 59466607 59466644 -143618888 + (TTTTTA)n Simple_repeat Simple_repeat 4 40 0 1270 228 57 121 chr5 59466645 59467493 -143618039 + MER21A LTR ERV1 187 879 -21 1861 143 29 0 chr5 59467494 59467773 -143617759 + AluSx SINE Alu 2 288 -24 198 0 0 0 chr5 59467777 59467799 -143617733 + (TA)n Simple_repeat Simple_repeat 1 22 0 1716 171 7 13 chr5 59467804 59468102 -143617430 - AluJo SINE Alu -16 296 1 830 249 36 18 chr5 59468127 59468348 -143617184 + MER21A-int LTR ERV1 3459 3683 -508 8882 47 1 1 chr5 59468351 59469422 -143616110 - MER11C LTR ERVK 0 1071 1 5736 49 11 0 chr5 59469422 59470121 -143615411 - HERVK11 LTR ERVK 0 7953 7247 1116 219 59 105 chr5 59470116 59470300 -143615232 + MER21A-int LTR ERV1 3692 3883 -308 * 1783 110 0 4 chr5 59470300 59470536 -143614996 + AluSx SINE Alu 1 235 -77 1116 219 59 105 chr5 59470536 59470560 -143614972 + MER21A-int LTR ERV1 3883 3907 -284 2403 70 7 0 chr5 59470560 59470859 -143614673 + AluY SINE Alu 1 301 -10 1116 219 59 105 chr5 59470859 59471105 -143614427 + MER21A-int LTR ERV1 3907 4126 -65 715 138 103 87 chr5 59471193 59471388 -143614144 + MER21A LTR ERV1 1 198 -733 * 1022 216 38 93 chr5 59471368 59471706 -143613826 + MER39 LTR ERV1 179 505 -202 1183 90 0 0 chr5 59472852 59472997 -143612535 - AluSq/x SINE Alu -168 145 1 342 0 0 0 chr5 59473086 59473124 -143612408 + (CA)n Simple_repeat Simple_repeat 2 39 0 2364 76 3 19 chr5 59473436 59473752 -143611780 - AluY SINE Alu 0 311 1 602 212 27 7 chr5 59473760 59473906 -143611626 - L1MB8 LINE L1 0 6178 6030 3629 227 130 62 chr5 59473945 59475784 -143609748 - L1M4c LINE L1 -2156 4801 2870 270 193 0 0 chr5 59475811 59475868 -143609664 + (TA)n Simple_repeat Simple_repeat 2 58 0 2239 109 0 16 chr5 59476135 59476446 -143609086 - AluSx SINE Alu -6 306 1 2490 230 59 59 chr5 59476587 59477274 -143608258 - L1M4c LINE L1 -4413 2725 2039 1877 182 0 3 chr5 59477274 59477581 -143607951 - AluJo SINE Alu -4 308 3 2490 230 59 59 chr5 59477581 59478370 -143607162 - L1M4c LINE L1 -5099 2039 1123 2430 278 71 27 chr5 59478393 59479249 -143606283 - L1M4c LINE L1 -5929 930 37 26 0 0 0 chr5 59480907 59480933 -143604599 + AT_rich Low_complexity Low_complexity 1 26 0 1130 153 31 31 chr5 59482043 59482271 -143603261 + Tigger5 DNA MER2_type 2096 2323 0 272 229 83 31 chr5 59482791 59482887 -143602645 - MER117 DNA MER1_type -2 195 95 33 43 0 0 chr5 59483329 59483376 -143602156 + AT_rich Low_complexity Low_complexity 1 47 0 2182 120 0 0 chr5 59483614 59483913 -143601619 - AluSc SINE Alu -10 299 1 904 156 6 11 chr5 59484428 59484608 -143600924 - L1M4 LINE L1 -5337 1205 1027 1871 156 0 20 chr5 59484671 59484966 -143600566 + AluJb SINE Alu 1 289 -23 3212 167 63 4 chr5 59485005 59485561 -143599971 + LTR39 LTR ERV1 195 783 0 4449 218 32 20 chr5 59485561 59485775 -143599757 - L1M4 LINE L1 -5515 1027 817 1867 172 7 0 chr5 59485775 59486077 -143599455 + AluSx SINE Alu 1 304 -8 4449 218 32 20 chr5 59486077 59486872 -143598660 - L1M4 LINE L1 -5725 817 6 1669 176 69 9 chr5 59487904 59488222 -143597310 - MER1B DNA MER1_type 0 337 1 2216 112 0 0 chr5 59488263 59488557 -143596975 + AluSx SINE Alu 1 294 -18 1677 225 90 50 chr5 59488614 59488636 -143596896 + L1MC4 LINE L1 7137 7157 -885 2189 116 0 0 chr5 59488636 59488948 -143596584 + AluSx SINE Alu 1 312 0 1677 225 90 50 chr5 59488948 59489681 -143595851 + L1MC4 LINE L1 7157 8037 -5 680 255 97 42 chr5 59489668 59490029 -143595503 + L1MC4 LINE L1 7553 7933 -109 * 233 246 0 0 chr5 59490141 59490199 -143595333 - MIR SINE MIR -87 121 64 1471 184 0 73 chr5 59491456 59491772 -143593760 + AluJo SINE Alu 6 298 -14 2588 58 0 0 chr5 59492987 59493295 -143592237 - AluY SINE Alu -3 308 1 295 286 103 11 chr5 59493306 59493481 -143592051 + L1ME LINE L1 5599 5789 -332 2991 193 22 75 chr5 59494167 59494560 -143590972 - L1MB7 LINE L1 -20 6164 5829 2104 117 0 0 chr5 59494560 59494843 -143590689 - AluSx SINE Alu -29 283 1 2991 193 22 75 chr5 59494843 59495211 -143590321 - L1MB7 LINE L1 -355 5829 5443 468 51 0 0 chr5 59496331 59496390 -143589142 + (TG)n Simple_repeat Simple_repeat 2 60 0 22 35 0 0 chr5 59496390 59496419 -143589113 + AT_rich Low_complexity Low_complexity 1 29 0 1834 160 0 22 chr5 59496435 59496747 -143588785 + AluJb SINE Alu 3 307 -5 588 133 112 0 chr5 59496748 59496846 -143588686 + MER2 DNA MER2_type 237 345 0 473 147 83 9 chr5 59496902 59497011 -143588521 - Charlie5 DNA MER1_type -12 2600 2484 254 329 24 0 chr5 59497305 59497387 -143588145 + MIR SINE MIR 3 86 -176 830 267 57 24 chr5 59497393 59497640 -143587892 + MIR SINE MIR 2 256 -6 1959 102 53 36 chr5 59498311 59498614 -143586918 - AluSc SINE Alu -1 308 1 613 142 28 0 chr5 59499162 59499268 -143586264 - AluSg/x SINE Alu -12 300 192 23 54 0 0 chr5 59499477 59499514 -143586018 + AT_rich Low_complexity Low_complexity 1 37 0 733 251 89 73 chr5 59499656 59500150 -143585382 - MLT1G LTR MaLR 0 567 38 454 217 158 13 chr5 59500155 59500307 -143585225 + MER3 DNA MER1_type 7 180 -29 325 148 37 0 chr5 59500340 59500394 -143585138 - MLT1G LTR MaLR -533 62 7 250 349 30 0 chr5 59500488 59500554 -143584978 + Charlie8 DNA MER1_type 4 71 -2346 268 337 11 0 chr5 59500743 59500832 -143584700 - Charlie8 DNA MER1_type -2144 273 184 1526 211 3 14 chr5 59501279 59501573 -143583959 - AluJb SINE Alu -20 292 2 2814 181 78 103 chr5 59502006 59502435 -143583097 + Looper DNA T2_type 28 466 -1092 1630 162 44 4 chr5 59502435 59502742 -143582790 - AluJb SINE Alu 0 318 1 2814 181 78 103 chr5 59502742 59503434 -143582098 + Looper DNA T2_type 466 1392 -166 830 151 0 0 chr5 59503434 59503553 -143581979 + FLAM_C SINE Alu 1 119 -24 26 50 0 0 chr5 59503553 59503593 -143581939 + AT_rich Low_complexity Low_complexity 1 40 0 606 160 107 24 chr5 59503593 59503762 -143581770 + Looper DNA T2_type 1376 1558 0 22 0 0 0 chr5 59503926 59503948 -143581584 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 59504854 59504882 -143580650 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 59505840 59505862 -143579670 + AT_rich Low_complexity Low_complexity 1 22 0 679 319 110 19 chr5 59505900 59506210 -143579322 - L2 LINE L2 -13 3300 2963 2326 72 14 0 chr5 59506570 59506860 -143578672 + AluSg SINE Alu 4 297 -13 187 364 26 0 chr5 59507018 59507095 -143578437 - MIR SINE MIR -113 149 71 2237 103 0 3 chr5 59508160 59508461 -143577071 - AluSx SINE Alu -12 300 1 876 163 10 74 chr5 59508672 59508875 -143576657 + L1PA15 LINE L1 5967 6156 -9 23 68 0 0 chr5 59508875 59508919 -143576613 + AT_rich Low_complexity Low_complexity 1 44 0 297 264 200 16 chr5 59510763 59510888 -143574644 - MIR SINE MIR -27 235 88 231 114 0 0 chr5 59511404 59511448 -143574084 + (T)n Simple_repeat Simple_repeat 1 44 0 2488 71 0 0 chr5 59511464 59511772 -143573760 + AluY SINE Alu 1 308 -3 1909 159 0 3 chr5 59512361 59512657 -143572875 - AluJb SINE Alu -17 295 1 203 308 209 0 chr5 59513563 59513654 -143571878 - L2 LINE L2 0 3272 3163 247 100 200 0 chr5 59513922 59513962 -143571570 + L1MB7 LINE L1 5740 5787 -396 329 42 62 0 chr5 59513962 59514010 -143571522 + MADE1 DNA Mariner 1 51 -29 1620 170 74 17 chr5 59514034 59514387 -143571145 + L1MB7 LINE L1 5793 6165 -19 303 169 28 0 chr5 59514435 59514506 -143571026 + L1MB3 LINE L1 6111 6183 0 26 0 0 0 chr5 59515531 59515557 -143569975 + AT_rich Low_complexity Low_complexity 1 26 0 782 265 160 32 chr5 59516678 59517249 -143568283 - L2 LINE L2 0 3313 2556 2211 83 6 46 chr5 59517634 59517960 -143567572 - AluSp SINE Alu 0 313 1 1643 188 3 29 chr5 59519912 59520221 -143565311 - AluJo SINE Alu -11 301 1 2125 94 0 4 chr5 59521320 59521597 -143563935 - AluSq SINE Alu -37 276 1 9546 166 153 19 chr5 59522750 59524949 -143560583 + L1M1 LINE L1 2 2496 -4353 * 9887 167 67 30 chr5 59524942 59525452 -143560080 + L1M1 LINE L1 3490 3980 -3025 1449 179 28 41 chr5 59525452 59525742 -143559790 - AluJo SINE Alu -26 286 1 9887 167 67 30 chr5 59525742 59526526 -143559006 + L1M1 LINE L1 3980 4734 -2271 1612 161 9 56 chr5 59526526 59526849 -143558683 + AluJo SINE Alu 1 308 -4 9887 167 67 30 chr5 59526849 59527007 -143558525 + L1M1 LINE L1 4734 4885 -2120 1986 119 14 0 chr5 59527007 59527292 -143558240 - AluY SINE Alu -18 293 5 9887 167 67 30 chr5 59527292 59527354 -143558178 + L1M1 LINE L1 4885 4943 -2062 2188 98 27 14 chr5 59527354 59527649 -143557883 + AluSx SINE Alu 1 299 -13 9887 167 67 30 chr5 59527649 59528818 -143556714 + L1M1 LINE L1 4943 6276 -729 1177 109 0 0 chr5 59529380 59529536 -143555996 + AluSg/x SINE Alu 148 303 -7 2241 101 60 17 chr5 59529734 59530081 -143555451 + THE1B LTR MaLR 1 362 -2 1253 197 104 15 chr5 59530321 59530656 -143554876 + MLT1A1 LTR MaLR 1 365 0 271 180 19 0 chr5 59530966 59531030 -143554502 + MER58 DNA MER1_type 262 2405 -15 2452 57 0 0 chr5 59532119 59532415 -143553117 + AluY SINE Alu 1 296 -15 1443 227 60 24 chr5 59532627 59533046 -143552486 + MER57B LTR ERV1 1 434 0 2273 82 0 3 chr5 59535871 59536164 -143549368 + AluSc SINE Alu 1 292 -17 219 220 0 0 chr5 59536692 59536742 -143548790 + (TA)n Simple_repeat Simple_repeat 2 51 0 2191 108 3 0 chr5 59537584 59537880 -143547652 - AluSx SINE Alu -15 297 1 252 0 0 0 chr5 59538243 59538271 -143547261 + (TG)n Simple_repeat Simple_repeat 1 28 0 2155 90 4 0 chr5 59538271 59538549 -143546983 - AluSx SINE Alu -33 279 1 276 316 39 22 chr5 59538993 59539035 -143546497 - L1MEc LINE L1 -882 1608 1568 2359 107 0 0 chr5 59539035 59539344 -143546188 - AluSx SINE Alu -3 309 1 276 316 39 22 chr5 59539344 59539522 -143546010 - L1MEc LINE L1 -922 1568 1371 661 290 164 23 chr5 59539602 59540291 -143545241 - L1MEc LINE L1 -4868 1251 466 304 165 0 0 chr5 59541305 59541366 -143544166 - Alu SINE Alu -8 294 243 285 222 79 30 chr5 59541796 59541897 -143543635 + L1ME LINE L1 5561 5663 -461 2320 97 7 0 chr5 59541949 59542247 -143543285 - AluSx SINE Alu -12 300 1 1923 133 29 0 chr5 59542274 59542583 -143542949 + MER2 DNA MER2_type 3 320 -25 24 53 0 0 chr5 59543447 59543485 -143542047 + AT_rich Low_complexity Low_complexity 1 38 0 840 141 27 54 chr5 59544642 59544791 -143540741 + AluJo SINE Alu 6 150 -162 2335 85 0 3 chr5 59545056 59545349 -143540183 - AluSg SINE Alu -7 303 12 2399 154 46 7 chr5 59545633 59546043 -143539489 + MSTB LTR MaLR 1 426 0 2067 138 0 3 chr5 59547157 59547454 -143538078 + AluSx SINE Alu 1 296 -16 1515 138 3 110 chr5 59548804 59549122 -143536410 + AluJb SINE Alu 1 284 -28 700 225 44 28 chr5 59549255 59549437 -143536095 + MER5A DNA MER1_type 2 186 -3 2194 113 0 0 chr5 59550379 59550679 -143534853 + AluSg SINE Alu 1 300 -10 25 51 0 0 chr5 59550942 59550981 -143534551 + AT_rich Low_complexity Low_complexity 1 39 0 2320 74 0 0 chr5 59551118 59551403 -143534129 + AluSg SINE Alu 11 295 -15 235 310 9 62 chr5 59551641 59551754 -143533778 + MIR SINE MIR 96 202 -60 23 0 0 0 chr5 59551922 59551945 -143533587 + AT_rich Low_complexity Low_complexity 1 23 0 1619 246 91 45 chr5 59551946 59552105 -143533427 + L1ME1 LINE L1 2040 2190 -4025 2282 122 3 0 chr5 59552105 59552416 -143533116 + AluSx SINE Alu 1 312 0 1619 246 91 45 chr5 59552416 59553210 -143532322 + L1ME1 LINE L1 2190 2998 -3217 401 182 0 0 chr5 59553210 59553276 -143532256 + Tigger2 DNA MER2_type 3 68 -2650 * 2194 125 87 17 chr5 59553268 59553683 -143531849 + Tigger2 DNA MER2_type 2274 2717 -1 943 272 26 24 chr5 59553732 59554188 -143531344 + L1ME1 LINE L1 3120 3576 -2639 835 224 0 0 chr5 59554188 59554344 -143531188 + AluJo SINE Alu 127 282 -30 30 69 0 0 chr5 59554344 59554402 -143531130 + AT_rich Low_complexity Low_complexity 1 58 0 1715 147 10 41 chr5 59554402 59554694 -143530838 + AluJb SINE Alu 1 283 -29 318 137 164 0 chr5 59554707 59554780 -143530752 + L1ME1 LINE L1 3548 3632 -2583 2401 224 109 7 chr5 59554791 59555655 -143529877 + L1ME1 LINE L1 3725 4676 -1539 1773 221 124 47 chr5 59555667 59556188 -143529344 + L1ME1 LINE L1 4724 5203 -1044 2302 104 0 0 chr5 59556188 59556495 -143529037 + AluY SINE Alu 1 307 -4 2825 63 3 3 chr5 59556495 59556861 -143528671 + L1PA8 LINE L1 5806 6171 -1 1773 221 124 47 chr5 59556861 59556876 -143528656 + L1ME1 LINE L1 5203 5215 -1032 1867 123 94 0 chr5 59556876 59557152 -143528380 + AluSx SINE Alu 1 302 -10 681 161 0 51 chr5 59557159 59557344 -143528188 + FLAM_C SINE Alu 5 183 0 1773 221 124 47 chr5 59557344 59557732 -143527800 + L1ME1 LINE L1 5220 5577 -670 1793 133 33 36 chr5 59557732 59558033 -143527499 - AluSx SINE Alu -12 300 1 1773 221 124 47 chr5 59558033 59558461 -143527071 + L1ME1 LINE L1 5577 6246 -1 2267 96 0 3 chr5 59558544 59558836 -143526696 - AluSx SINE Alu -16 296 6 1199 91 152 0 chr5 59558957 59559155 -143526377 + MER30 DNA MER1_type 3 230 0 443 317 107 52 chr5 59559233 59559652 -143525880 + L2 LINE L2 189 630 -2684 262 396 28 0 chr5 59559750 59559856 -143525676 + L2 LINE L2 3116 3224 -48 2378 106 0 0 chr5 59559917 59560229 -143525303 + AluSx SINE Alu 1 312 0 738 179 104 6 chr5 59560726 59560899 -143524633 + MER58A DNA MER1_type 1 190 -34 939 130 0 29 chr5 59560900 59561038 -143524494 + AluJo SINE Alu 1 134 -178 26 0 0 0 chr5 59561039 59561065 -143524467 + AT_rich Low_complexity Low_complexity 1 26 0 2204 114 0 3 chr5 59562016 59562314 -143523218 + AluSq SINE Alu 1 297 -16 2167 107 0 19 chr5 59562702 59563020 -143522512 + AluSx SINE Alu 1 312 0 264 324 58 61 chr5 59564529 59564699 -143520833 + L2 LINE L2 1745 1914 -1400 2256 111 0 0 chr5 59564699 59564996 -143520536 - AluSg SINE Alu -13 297 1 264 324 58 61 chr5 59564996 59565168 -143520364 + L2 LINE L2 1914 2086 -1228 1563 180 11 25 chr5 59565333 59565617 -143519915 + AluJo SINE Alu 1 280 -32 2028 133 17 0 chr5 59565817 59566119 -143519413 + AluSg SINE Alu 1 307 -3 573 204 19 0 chr5 59566120 59566277 -143519255 + GA-rich Low_complexity Low_complexity 1 160 0 296 279 70 0 chr5 59566830 59566916 -143518616 - L2 LINE L2 -28 3244 3153 30 0 0 0 chr5 59567118 59567148 -143518384 + AT_rich Low_complexity Low_complexity 1 30 0 1403 158 27 65 chr5 59567169 59567461 -143518071 - AluJo SINE Alu -27 285 5 2384 107 0 0 chr5 59567483 59567793 -143517739 - AluSx SINE Alu -2 310 1 865 228 23 0 chr5 59568428 59568599 -143516933 - FAM SINE Alu 0 175 1 1758 141 0 112 chr5 59569473 59569813 -143515719 - AluJo SINE Alu -10 302 1 2041 164 3 0 chr5 59570878 59571189 -143514343 - AluSx SINE Alu 0 312 1 1195 150 0 0 chr5 59571332 59571505 -143514027 + AluSg/x SINE Alu 137 309 -1 21 0 0 0 chr5 59571774 59571795 -143513737 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 59572455 59572483 -143513049 + AT_rich Low_complexity Low_complexity 1 28 0 2267 116 0 7 chr5 59572520 59572823 -143512709 - AluSq SINE Alu -12 301 1 410 242 91 32 chr5 59573306 59573492 -143512040 - L1ME LINE L1 -349 5772 5576 2825 168 47 19 chr5 59573777 59574398 -143511134 - L1MB8 LINE L1 0 6178 5541 295 217 64 0 chr5 59574810 59574907 -143510625 - L1ME LINE L1 -279 5885 5782 189 0 0 0 chr5 59575491 59575512 -143510020 + (TTTTTA)n Simple_repeat Simple_repeat 6 26 0 368 234 23 17 chr5 59575515 59575690 -143509842 + (TA)n Simple_repeat Simple_repeat 2 177 0 264 30 0 0 chr5 59575690 59575723 -143509809 + (CA)n Simple_repeat Simple_repeat 2 34 0 237 296 222 0 chr5 59575944 59576025 -143509507 - L2 LINE L2 -21 3251 3153 24 53 0 0 chr5 59576649 59576687 -143508845 + AT_rich Low_complexity Low_complexity 1 38 0 2164 127 7 3 chr5 59576885 59577184 -143508348 + AluSx SINE Alu 1 300 -12 1404 150 162 71 chr5 59577496 59577916 -143507616 + MER31B LTR ERV1 1 458 -8 21 0 0 0 chr5 59578001 59578022 -143507510 + AT_rich Low_complexity Low_complexity 1 21 0 1096 255 119 78 chr5 59578112 59578778 -143506754 + MER21B LTR ERV1 21 713 -150 384 291 107 54 chr5 59579250 59579786 -143505746 - L1ME4a LINE L1 -233 5888 5282 2263 123 0 3 chr5 59579799 59580108 -143505424 + AluSx SINE Alu 1 308 -4 2359 89 0 0 chr5 59580129 59580421 -143505111 + AluSg SINE Alu 1 292 -18 24 67 0 0 chr5 59581159 59581204 -143504328 + AT_rich Low_complexity Low_complexity 1 45 0 518 109 4 7 chr5 59581343 59581589 -143503943 + AluSx SINE Alu 1 300 -10 21 71 0 0 chr5 59581747 59581789 -143503743 + AT_rich Low_complexity Low_complexity 1 42 0 2293 121 0 0 chr5 59581864 59582170 -143503362 + AluSx SINE Alu 5 310 -2 28 0 0 0 chr5 59582276 59582304 -143503228 + AT_rich Low_complexity Low_complexity 1 28 0 910 119 0 0 chr5 59582333 59582451 -143503081 + AluSq SINE Alu 91 208 -105 1586 157 0 20 chr5 59582452 59582700 -143502832 + AluSp SINE Alu 46 288 -25 2490 84 3 0 chr5 59583636 59583946 -143501586 - AluSp SINE Alu -2 311 1 290 241 106 78 chr5 59584102 59584243 -143501289 + MIR3 SINE MIR 57 201 -7 2072 147 0 0 chr5 59585082 59585382 -143500150 + AluSx SINE Alu 11 310 -2 258 181 0 64 chr5 59585809 59585872 -143499660 + L1MD2 LINE L1 6026 6105 -84 534 294 123 5 chr5 59586182 59586386 -143499146 - MIR SINE MIR -5 257 30 1805 174 13 19 chr5 59586527 59586838 -143498694 + AluJo SINE Alu 1 309 -3 1491 184 13 49 chr5 59586960 59587102 -143498430 + AluJo SINE Alu 4 150 -162 2259 96 24 0 chr5 59587102 59587394 -143498138 + AluY SINE Alu 1 299 -12 1491 184 13 49 chr5 59587394 59587555 -143497977 + AluJo SINE Alu 150 296 -16 194 275 110 11 chr5 59587992 59588083 -143497449 + L2 LINE L2 2811 2910 -362 2165 87 6 35 chr5 59588335 59588646 -143496886 + AluSq SINE Alu 1 302 -11 214 132 26 0 chr5 59588868 59588906 -143496626 + L2 LINE L2 3161 3199 -73 1975 123 0 11 chr5 59589332 59589653 -143495879 - AluSx SINE Alu 0 318 1 725 241 78 16 chr5 59589901 59590158 -143495374 + LTR33 LTR ERVL 245 517 -4 1775 173 0 30 chr5 59590747 59591048 -143494484 - AluJo SINE Alu -20 292 1 471 227 39 8 chr5 59591149 59591277 -143494255 - LTR33 LTR ERVL -8 513 382 289 185 0 0 chr5 59591393 59591447 -143494085 - LTR33A LTR ERVL -383 140 87 180 0 0 0 chr5 59591915 59591935 -143493597 + (CA)n Simple_repeat Simple_repeat 2 21 0 187 288 34 17 chr5 59592008 59592067 -143493465 + L2 LINE L2 3254 3313 0 22 35 0 0 chr5 59593177 59593206 -143492326 + AT_rich Low_complexity Low_complexity 1 29 0 187 261 22 0 chr5 59593245 59593291 -143492241 - L2 LINE L2 -12 3260 3214 25 31 0 0 chr5 59593466 59593498 -143492034 + AT_rich Low_complexity Low_complexity 1 32 0 2408 64 10 0 chr5 59593573 59593871 -143491661 - AluY SINE Alu -10 301 1 23 33 0 0 chr5 59593871 59593901 -143491631 + AT_rich Low_complexity Low_complexity 1 30 0 1998 128 7 0 chr5 59594523 59594838 -143490694 + AluSq SINE Alu 1 317 0 2155 123 3 0 chr5 59594994 59595294 -143490238 - AluSp SINE Alu -12 301 1 895 226 0 37 chr5 59595654 59595697 -143489835 + MER3 DNA MER1_type 1 44 -165 2353 81 0 3 chr5 59595697 59595993 -143489539 + AluSc SINE Alu 1 295 -14 895 226 0 37 chr5 59595993 59596166 -143489366 + MER3 DNA MER1_type 44 209 0 1984 112 17 21 chr5 59596984 59597271 -143488261 + AluSx SINE Alu 1 286 -26 200 163 23 0 chr5 59597275 59597318 -143488214 + G-rich Low_complexity Low_complexity 3 46 0 2225 122 0 0 chr5 59597697 59597992 -143487540 + AluSx SINE Alu 10 304 -8 261 272 123 0 chr5 59598391 59598472 -143487060 + MIR SINE MIR 16 106 -156 2605 33 0 3 chr5 59599091 59599391 -143486141 + AluY SINE Alu 1 299 -12 230 190 0 76 chr5 59599392 59599471 -143486061 + L1ME LINE L1 5731 5803 -359 262 243 14 14 chr5 59599524 59599598 -143485934 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 712 233 0 0 chr5 59599872 59600001 -143485531 - FRAM SINE Alu -47 129 1 191 309 0 0 chr5 59600018 59600060 -143485472 + L2 LINE L2 3210 3251 -21 1350 177 20 10 chr5 59600115 59600415 -143485117 - MER33 DNA MER1_type -5 319 17 657 210 0 70 chr5 59601052 59601195 -143484337 - FLAM_A SINE Alu 0 133 1 2815 189 35 71 chr5 59601360 59602068 -143483464 - MER44D DNA MER2_type 0 605 51 531 212 9 0 chr5 59602070 59602183 -143483349 - MER44D DNA MER2_type -588 117 4 433 310 16 0 chr5 59602663 59602792 -143482740 - L2 LINE L2 -1 3312 3182 2158 116 20 0 chr5 59604826 59605120 -143480412 + AluSx SINE Alu 5 304 -8 925 144 0 0 chr5 59605128 59605260 -143480272 + FLAM_C SINE Alu 1 132 -1 235 293 110 12 chr5 59605453 59605535 -143479997 - MIR SINE MIR -95 113 24 236 210 16 16 chr5 59605749 59605811 -143479721 - L1MD2 LINE L1 -86 6273 6212 2158 119 7 0 chr5 59606200 59606503 -143479029 + AluSx SINE Alu 1 305 -7 714 150 0 25 chr5 59606727 59606847 -143478685 - AluJb SINE Alu -19 293 177 806 151 0 0 chr5 59607339 59607458 -143478074 + FRAM SINE Alu 38 156 -20 2181 176 10 35 chr5 59607900 59608173 -143477359 - L1MD2 LINE L1 -428 5931 5653 360 0 0 0 chr5 59608173 59608213 -143477319 + (TA)n Simple_repeat Simple_repeat 2 41 0 2181 176 10 35 chr5 59608213 59608645 -143476887 - L1MD2 LINE L1 -706 5653 5271 258 206 0 0 chr5 59608658 59608726 -143476806 + T-rich Low_complexity Low_complexity 1 68 0 757 263 25 16 chr5 59608741 59608984 -143476548 - L1PA15-16 LINE L1 -4353 2496 2252 2036 137 3 0 chr5 59608985 59609278 -143476254 - AluSx SINE Alu -18 294 1 202 229 350 0 chr5 59610545 59610702 -143474830 - L2 LINE L2 -340 2974 2763 26 30 0 0 chr5 59611376 59611409 -143474123 + AT_rich Low_complexity Low_complexity 1 33 0 582 290 60 32 chr5 59611508 59611856 -143473676 - HAL1b LINE L1 -766 582 225 268 24 49 0 chr5 59611899 59611940 -143473592 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2370 57 0 0 chr5 59611943 59612224 -143473308 - AluY SINE Alu -30 281 1 274 167 0 0 chr5 59612238 59612280 -143473252 - 5S rRNA rRNA -79 42 1 751 206 5 33 chr5 59613757 59613941 -143471591 - MER49 LTR ERV1 0 923 745 287 317 7 35 chr5 59614095 59614240 -143471292 + CT-rich Low_complexity Low_complexity 3 143 0 478 252 50 0 chr5 59614446 59614585 -143470947 - AluJb SINE Alu -4 308 163 1572 185 0 11 chr5 59614641 59614928 -143470604 - AluJb SINE Alu -1 311 28 764 188 0 0 chr5 59615076 59615204 -143470328 - FLAM_A SINE Alu -5 128 1 264 273 172 20 chr5 59615211 59615310 -143470222 - L2 LINE L2 -11 3302 3189 524 105 35 12 chr5 59615738 59615824 -143469708 - LTR9 LTR ERV1 -115 497 410 2624 160 22 4 chr5 59615836 59616293 -143469239 - HUERS-P3 LTR ERV1 -8454 465 1 1296 98 6 0 chr5 59616293 59616467 -143469065 - LTR9 LTR ERV1 0 612 438 767 147 16 23 chr5 59616548 59616677 -143468855 - L1MC1 LINE L1 -5 6328 6201 1248 187 14 0 chr5 59616780 59616989 -143468543 - AluJo SINE Alu -100 212 1 522 260 68 73 chr5 59616989 59617358 -143468174 - L1M4 LINE L1 -2397 3749 3383 1826 164 0 0 chr5 59617360 59617635 -143467897 + AluJb SINE Alu 11 285 -27 370 164 55 27 chr5 59619048 59619194 -143466338 + G-rich Low_complexity Low_complexity 5 154 0 1584 129 152 15 chr5 59619242 59619335 -143466197 + AluSx SINE Alu 4 83 -219 2070 104 24 0 chr5 59619335 59619622 -143465910 + AluSg1 SINE Alu 1 294 -15 1584 129 152 15 chr5 59619622 59619791 -143465741 + AluSx SINE Alu 83 302 0 1792 179 7 0 chr5 59620056 59620347 -143465185 - AluJb SINE Alu -9 303 11 852 134 0 8 chr5 59620558 59620677 -143464855 + FLAM_C SINE Alu 1 118 -15 457 263 136 30 chr5 59620837 59621026 -143464506 + L1M4 LINE L1 2841 3009 -3137 2026 127 0 0 chr5 59621026 59621332 -143464200 + AluSx SINE Alu 6 311 0 457 263 136 30 chr5 59621332 59621527 -143464005 + L1M4 LINE L1 3009 3301 -2845 255 351 18 9 chr5 59622516 59622627 -143462905 - L2 LINE L2 -1009 2305 2194 274 296 278 12 chr5 59622779 59622948 -143462584 - MIR SINE MIR 0 262 49 2041 151 0 3 chr5 59623105 59623404 -143462128 - AluSx SINE Alu -14 298 1 459 284 37 6 chr5 59623599 59623761 -143461771 + L2 LINE L2 3142 3308 -5 311 293 61 0 chr5 59623760 59623859 -143461673 - MIR SINE MIR -84 178 74 * 759 229 17 87 chr5 59625466 59625781 -143459751 + L1ME1 LINE L1 5845 6140 -26 634 216 78 54 chr5 59625955 59626197 -143459335 + MIR SINE MIR 2 252 -10 293 250 73 0 chr5 59626559 59626655 -143458877 + L1ME4a LINE L1 5716 5818 -303 321 226 9 61 chr5 59626745 59626860 -143458672 + L1ME4a LINE L1 5944 6052 -69 2436 49 3 20 chr5 59626899 59627204 -143458328 - AluY SINE Alu 0 311 12 1355 102 15 20 chr5 59627204 59627400 -143458132 + AluSq SINE Alu 115 309 -4 2250 123 7 0 chr5 59627436 59627812 -143457720 + AluSx SINE Alu 1 378 0 180 0 0 0 chr5 59627959 59627979 -143457553 + (CA)n Simple_repeat Simple_repeat 2 21 0 2119 102 0 40 chr5 59628504 59628807 -143456725 - AluSx SINE Alu -21 291 1 1290 209 55 0 chr5 59628893 59629146 -143456386 + AluJo SINE Alu 1 267 -45 21 0 0 0 chr5 59629841 59629862 -143455670 + AT_rich Low_complexity Low_complexity 1 21 0 351 282 163 14 chr5 59630401 59630610 -143454922 - MIR SINE MIR -15 247 8 536 262 183 62 chr5 59630913 59631531 -143454001 + L2 LINE L2 1726 2418 -896 713 324 39 54 chr5 59631658 59632124 -143453408 + L2 LINE L2 2100 2558 -756 225 211 0 0 chr5 59632614 59632652 -143452880 + tRNA-Val-GTG tRNA tRNA 1 38 -38 1487 157 130 27 chr5 59632713 59632974 -143452558 + AluJb SINE Alu 3 290 -12 282 219 20 41 chr5 59633215 59633361 -143452171 + (CAAGA)n Simple_repeat Simple_repeat 5 147 0 1560 164 16 42 chr5 59633978 59634288 -143451244 - AluJb SINE Alu -10 302 1 1821 132 45 3 chr5 59634637 59634924 -143450608 - AluSg SINE Alu -11 299 1 190 259 17 17 chr5 59634930 59634988 -143450544 + MER5A DNA MER1_type 131 188 -1 338 149 189 27 chr5 59635126 59635200 -143450332 + MER6 DNA MER2_type 1 86 -779 * 355 112 6 0 chr5 59635197 59635263 -143450269 - Alu SINE Alu -248 53 1 2164 111 13 7 chr5 59636258 59636565 -143448967 + AluSq SINE Alu 1 309 -4 537 241 61 80 chr5 59637260 59637472 -143448060 - MIR SINE MIR -18 244 37 1909 143 6 34 chr5 59637721 59637862 -143447670 + AluJb SINE Alu 1 144 -168 2265 108 3 0 chr5 59637862 59638159 -143447373 + AluSx SINE Alu 1 298 -14 1909 143 6 34 chr5 59638159 59638338 -143447194 + AluJb SINE Alu 144 312 0 279 221 183 19 chr5 59638589 59638693 -143446839 + MIR SINE MIR 136 256 -6 902 178 6 12 chr5 59639183 59639352 -143446180 - AluJo SINE Alu -9 303 136 2161 87 18 0 chr5 59639482 59639808 -143445724 - AluY SINE Alu 0 331 1 1826 128 36 20 chr5 59639881 59640187 -143445345 - L1MA3 LINE L1 -1 6304 5994 298 337 189 0 chr5 59640242 59640417 -143445115 + MIR SINE MIR 55 262 0 314 249 87 87 chr5 59640487 59640672 -143444860 + L2 LINE L2 2869 3053 -219 1582 124 55 0 chr5 59640956 59641174 -143444358 + MER30 DNA MER1_type 1 230 0 2156 108 3 17 chr5 59641318 59641613 -143443919 + AluSq SINE Alu 1 291 -22 408 229 188 35 chr5 59642049 59642219 -143443313 - MIR SINE MIR -50 212 17 881 128 7 43 chr5 59642284 59642425 -143443107 - AluJo SINE Alu -176 136 1 218 264 19 38 chr5 59642500 59642606 -143442926 + GA-rich Low_complexity Low_complexity 2 105 0 2618 56 0 0 chr5 59643440 59643744 -143441788 + AluY SINE Alu 1 304 -7 312 315 0 37 chr5 59643771 59643879 -143441653 + L2 LINE L2 3169 3272 0 1206 253 140 38 chr5 59644370 59644841 -143440691 - LTR33 LTR ERVL -2 519 1 423 320 56 0 chr5 59645202 59645327 -143440205 + L2 LINE L2 3141 3272 0 185 164 0 73 chr5 59646025 59646080 -143439452 + (CATATA)n Simple_repeat Simple_repeat 1 51 0 25 31 0 0 chr5 59649390 59649422 -143436110 + AT_rich Low_complexity Low_complexity 1 32 0 2309 82 7 0 chr5 59649470 59649761 -143435771 + AluSg1 SINE Alu 5 297 -12 2114 118 7 0 chr5 59649891 59650197 -143435335 + AluSx SINE Alu 1 308 -4 1410 175 128 85 chr5 59652250 59652695 -143432837 + MER31B LTR ERV1 3 466 0 200 64 43 128 chr5 59652752 59652799 -143432733 + MIR SINE MIR 119 161 -101 208 214 0 0 chr5 59653408 59653450 -143432082 - L2 LINE L2 -4 3309 3268 32 56 0 14 chr5 59653479 59653537 -143431995 + AT_rich Low_complexity Low_complexity 1 59 -11 1798 73 20 0 chr5 59653537 59653782 -143431750 - L1MA2 LINE L1 0 6304 6055 32 56 0 14 chr5 59653782 59653794 -143431738 + AT_rich Low_complexity Low_complexity 59 70 0 204 306 133 0 chr5 59653867 59653965 -143431567 - L2 LINE L2 0 3313 3203 2158 85 3 14 chr5 59653999 59654337 -143431195 + AluSc SINE Alu 1 335 0 2248 91 0 26 chr5 59654419 59654558 -143430974 + AluSx SINE Alu 1 142 -170 2316 101 7 0 chr5 59654558 59654866 -143430666 + AluSp SINE Alu 1 310 -3 2248 91 0 26 chr5 59654866 59655033 -143430499 + AluSx SINE Alu 142 299 -13 258 111 0 0 chr5 59655327 59655363 -143430169 + LTR24C LTR ERV1 520 555 -80 272 116 0 23 chr5 59656012 59656055 -143429477 + Alu SINE Alu 1 42 -260 1628 103 4 4 chr5 59656055 59656287 -143429245 + AluSg/x SINE Alu 79 310 0 2181 107 0 7 chr5 59656350 59656649 -143428883 + AluSx SINE Alu 1 297 -15 307 254 48 48 chr5 59656813 59656939 -143428593 - L1ME3A LINE L1 -205 5965 5840 853 288 69 24 chr5 59656940 59657394 -143428138 - L1ME3A LINE L1 -378 5806 5293 373 231 82 37 chr5 59657395 59657529 -143428003 - L1ME3A LINE L1 -822 5324 5185 299 289 116 40 chr5 59657538 59657711 -143427821 + MLT1L LTR MaLR 207 392 -223 233 271 52 83 chr5 59658852 59658948 -143426584 - L3 LINE CR1 -1201 376 284 2305 94 10 0 chr5 59658964 59659271 -143426261 - AluSg SINE Alu 0 310 1 820 188 8 0 chr5 59659392 59659520 -143426012 + FLAM_A SINE Alu 1 129 -4 1651 175 10 14 chr5 59659522 59659814 -143425718 + AluJo SINE Alu 1 291 -21 2641 61 0 0 chr5 59660031 59660342 -143425190 - AluSq SINE Alu -1 312 2 2381 86 3 6 chr5 59660598 59660911 -143424621 + AluSq SINE Alu 1 312 -1 471 233 52 71 chr5 59661245 59661420 -143424112 - MER5A DNA MER1_type 0 189 7 923 166 26 71 chr5 59661513 59661608 -143423924 + MIR SINE MIR 38 136 -126 234 0 0 0 chr5 59661608 59661634 -143423898 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1770 115 0 4 chr5 59661636 59661871 -143423661 - AluSx SINE Alu -25 287 54 923 166 26 71 chr5 59661871 59662010 -143423522 + MIR SINE MIR 137 262 0 414 259 19 37 chr5 59662219 59662327 -143423205 + MER5A DNA MER1_type 4 109 -80 22 0 0 0 chr5 59662329 59662351 -143423181 + AT_rich Low_complexity Low_complexity 1 22 0 2285 116 0 3 chr5 59662713 59663023 -143422509 + AluSc SINE Alu 1 309 0 21 0 0 0 chr5 59663028 59663049 -143422483 + AT_rich Low_complexity Low_complexity 1 21 0 2399 78 0 23 chr5 59663343 59663649 -143421883 + AluY SINE Alu 1 299 -12 1736 168 3 11 chr5 59665281 59665567 -143419965 - AluJo SINE Alu -11 301 18 328 369 65 9 chr5 59665690 59665904 -143419628 + MIR SINE MIR 23 248 -14 207 295 39 26 chr5 59666023 59666101 -143419431 - MIR3 SINE MIR -6 202 124 2379 73 0 7 chr5 59669448 59669769 -143415763 - AluSq SINE Alu 0 313 1 206 355 0 13 chr5 59669866 59669942 -143415590 - MER5A DNA MER1_type -28 161 87 3600 156 77 24 chr5 59669975 59670419 -143415113 + MER6 DNA MER2_type 1 420 -445 248 0 31 0 chr5 59670419 59670451 -143415081 + (TG)n Simple_repeat Simple_repeat 2 34 0 3600 156 77 24 chr5 59670451 59670572 -143414960 + MER6 DNA MER2_type 420 533 -332 1848 157 0 10 chr5 59670572 59670871 -143414661 + AluJo SINE Alu 1 296 -16 3600 156 77 24 chr5 59670871 59670983 -143414549 + MER6 DNA MER2_type 533 715 -150 2196 100 7 13 chr5 59670990 59671291 -143414241 + AluSx SINE Alu 1 299 -13 805 170 57 13 chr5 59671309 59671468 -143414064 + MLT1D LTR MaLR 32 197 -308 606 210 65 0 chr5 59671504 59671628 -143413904 + MLT1D LTR MaLR 365 496 -9 2007 197 24 84 chr5 59672421 59672491 -143413041 - MLT1D LTR MaLR 0 505 432 1613 174 25 14 chr5 59672491 59672766 -143412766 + AluJo SINE Alu 3 280 -32 2007 197 24 84 chr5 59672766 59673232 -143412300 - MLT1D LTR MaLR -73 432 1 1048 148 6 12 chr5 59673444 59673606 -143411926 - FRAM SINE Alu -16 160 1 2281 218 84 22 chr5 59673617 59673772 -143411760 - L1ME3A LINE L1 -244 5926 5782 1717 175 32 23 chr5 59673772 59674080 -143411452 - AluJb SINE Alu -1 311 1 2281 218 84 22 chr5 59674080 59674521 -143411011 - L1ME3A LINE L1 -388 5782 5293 2962 76 14 30 chr5 59674539 59674975 -143410557 + L1PA16 LINE L1 4402 4830 -1316 894 56 0 0 chr5 59675005 59675112 -143410420 + AluSc SINE Alu 195 301 -8 4404 107 19 48 chr5 59675298 59675701 -143409831 + L1PA16 LINE L1 5285 5656 -510 2336 113 3 0 chr5 59675701 59676011 -143409521 + AluSq SINE Alu 1 311 -2 4404 107 19 48 chr5 59676011 59676314 -143409218 + L1PA16 LINE L1 5656 5966 -200 1827 163 0 0 chr5 59676321 59676603 -143408929 + AluJb SINE Alu 1 282 -30 3001 3 0 0 chr5 59676603 59676918 -143408614 + AluYb8 SINE Alu 1 315 -3 28 48 0 0 chr5 59676929 59676971 -143408561 + AT_rich Low_complexity Low_complexity 1 42 0 201 250 0 0 chr5 59677421 59677469 -143408063 - L2 LINE L2 -3 3310 3263 1316 266 66 53 chr5 59677704 59678216 -143407316 - LTR33A LTR ERVL 0 523 5 260 337 42 36 chr5 59678363 59678529 -143407003 - MER5A DNA MER1_type -14 175 9 829 122 65 0 chr5 59678843 59678966 -143406566 + AluJb SINE Alu 6 136 -176 1814 147 10 27 chr5 59678989 59679288 -143406244 + AluJb SINE Alu 1 294 -18 2100 126 3 0 chr5 59679289 59679598 -143405934 + AluSq SINE Alu 1 310 -3 551 145 0 0 chr5 59679620 59679703 -143405829 + Tigger5 DNA MER2_type 156 238 -2085 * 2392 150 64 14 chr5 59679698 59680119 -143405413 + Tigger5 DNA MER2_type 1882 2323 0 2202 105 26 7 chr5 59680320 59680626 -143404906 + AluSx SINE Alu 1 312 0 1865 139 7 21 chr5 59680695 59681005 -143404527 - AluJb SINE Alu 0 311 6 1883 145 13 13 chr5 59681019 59681186 -143404346 - AluSx SINE Alu -8 304 135 2315 115 0 3 chr5 59681186 59681500 -143404032 - AluSq SINE Alu 0 313 1 1883 145 13 13 chr5 59681500 59681636 -143403896 - AluSx SINE Alu -176 136 1 2304 90 7 0 chr5 59682273 59682563 -143402969 + AluY SINE Alu 1 292 -19 2272 96 0 7 chr5 59682729 59683031 -143402501 - AluY SINE Alu -11 300 1 1557 159 33 22 chr5 59683033 59683304 -143402228 - AluJo SINE Alu -18 294 21 577 229 169 3 chr5 59683337 59683527 -143402005 + L1M3 LINE L1 5611 5828 -307 1781 148 36 11 chr5 59683528 59683829 -143401703 + AluSx SINE Alu 1 308 0 216 132 66 26 chr5 59683968 59684044 -143401488 + (TA)n Simple_repeat Simple_repeat 2 80 0 333 148 0 36 chr5 59684140 59684171 -143401361 - L1MA4 LINE L1 -205 6095 6064 2199 113 0 3 chr5 59684171 59684462 -143401070 - AluSg SINE Alu -20 290 1 333 148 0 36 chr5 59684462 59684519 -143401013 - L1MA4 LINE L1 -236 6064 6013 2422 115 17 0 chr5 59684555 59684911 -143400621 - L1PB1 LINE L1 -8 6143 5782 421 22 44 44 chr5 59684912 59685003 -143400529 + (TA)n Simple_repeat Simple_repeat 2 92 0 1381 67 0 51 chr5 59685010 59685121 -143400411 - L1PB1 LINE L1 -361 5790 5692 2353 112 0 3 chr5 59685121 59685433 -143400099 - AluSx SINE Alu -1 311 1 1381 67 0 51 chr5 59685433 59685516 -143400016 - L1PB1 LINE L1 -459 5692 5606 355 78 0 0 chr5 59686760 59686811 -143398721 - MADE1 DNA Mariner -29 51 1 207 100 0 0 chr5 59687115 59687145 -143398387 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 306 106 0 0 chr5 59687276 59687323 -143398209 + (TG)n Simple_repeat Simple_repeat 1 47 0 8285 53 9 0 chr5 59687871 59688828 -143396704 + LTR5 LTR ERVK 1 966 -3 646 236 20 20 chr5 59689026 59689221 -143396311 - LTR37B LTR ERV1 -2 466 272 1868 129 43 4 chr5 59689221 59689499 -143396033 - AluSx SINE Alu -20 292 4 245 165 0 174 chr5 59689586 59689609 -143395923 - LTR37B LTR ERV1 -187 281 256 4249 169 17 25 chr5 59689609 59689657 -143395875 + L1MC2 LINE L1 5539 5586 -758 2305 121 0 0 chr5 59689657 59689964 -143395568 - AluSx SINE Alu -5 307 1 4249 169 17 25 chr5 59689964 59690727 -143394805 + L1MC2 LINE L1 5586 6344 0 245 165 0 174 chr5 59690727 59690773 -143394759 - LTR37B LTR ERV1 -212 256 235 1706 157 6 68 chr5 59690773 59691098 -143394434 - AluJb SINE Alu -7 305 1 245 165 0 174 chr5 59691098 59691136 -143394396 - LTR37B LTR ERV1 -233 235 192 432 301 9 74 chr5 59691278 59691415 -143394117 + MIR SINE MIR 20 140 -122 2229 132 3 0 chr5 59691415 59691726 -143393806 + AluSx SINE Alu 1 312 0 432 301 9 74 chr5 59691726 59691804 -143393728 + MIR SINE MIR 140 221 -41 287 254 0 14 chr5 59691793 59691864 -143393668 - MIR SINE MIR -182 80 11 * 2239 109 0 10 chr5 59691921 59692223 -143393309 + AluSx SINE Alu 1 299 -13 635 213 59 0 chr5 59692231 59692367 -143393165 + L1MD2 LINE L1 5997 6140 -219 396 179 84 0 chr5 59692492 59692587 -143392945 + L1MD2 LINE L1 6154 6256 -103 1357 157 130 30 chr5 59692712 59692974 -143392558 - AluJb SINE Alu -12 290 3 650 154 0 18 chr5 59693475 59693585 -143391947 - FLAM_C SINE Alu 0 143 36 201 200 0 0 chr5 59695325 59695360 -143390172 + L2 LINE L2 2716 2750 -564 2378 96 7 0 chr5 59695360 59695662 -143389870 + AluSx SINE Alu 1 304 -8 420 242 176 7 chr5 59696263 59696416 -143389116 + MER5A DNA MER1_type 10 188 -1 420 242 176 7 chr5 59697115 59697268 -143388264 + MER5A DNA MER1_type 10 188 -1 1950 146 3 7 chr5 59697428 59697730 -143387802 - AluJb SINE Alu -11 301 1 1138 144 64 11 chr5 59697751 59697938 -143387594 - AluJb SINE Alu -26 286 90 2040 113 9 35 chr5 59698050 59698368 -143387164 + AluSx SINE Alu 1 310 -2 278 271 75 9 chr5 59698555 59698662 -143386870 + L1ME4a LINE L1 5529 5642 -479 1665 127 4 22 chr5 59698787 59699054 -143386478 - AluSg SINE Alu -48 262 1 659 250 63 110 chr5 59699054 59699078 -143386454 + L1ME4a LINE L1 5638 5662 -459 2277 122 3 0 chr5 59699078 59699389 -143386143 + AluSx SINE Alu 1 312 0 659 250 63 110 chr5 59699389 59699593 -143385939 + L1ME4a LINE L1 5662 5874 -247 1863 163 7 0 chr5 59699593 59699882 -143385650 + AluJo SINE Alu 1 291 -21 411 106 0 0 chr5 59699882 59699948 -143385584 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 659 250 63 110 chr5 59699948 59700145 -143385387 + L1ME4a LINE L1 5872 6045 -76 1479 223 65 51 chr5 59700551 59701062 -143384470 - L1MD3 LINE L1 0 8042 7537 948 274 61 66 chr5 59701059 59701210 -143384322 - L1MC4a LINE L1 -1911 5897 5747 * 2400 85 0 25 chr5 59701210 59701527 -143384005 - AluSg SINE Alu -1 309 1 948 274 61 66 chr5 59701527 59701676 -143383856 - L1MC4a LINE L1 -2061 5747 5599 1732 128 8 8 chr5 59701676 59701934 -143383598 - AluSx SINE Alu -5 307 50 948 274 61 66 chr5 59701934 59702224 -143383308 - L1MC4a LINE L1 -2209 5599 5309 1303 223 63 22 chr5 59702655 59702974 -143382558 - MER115 DNA AcHobo 0 693 362 275 302 28 19 chr5 59703153 59703259 -143382273 - MER115 DNA AcHobo -569 124 18 770 138 0 36 chr5 59703320 59703458 -143382074 - AluJo SINE Alu -3 309 177 742 138 0 0 chr5 59703460 59703569 -143381963 - AluJo SINE Alu -202 110 2 604 278 32 39 chr5 59703760 59704044 -143381488 - L1ME4a LINE L1 -3 6118 5837 240 231 51 0 chr5 59704059 59704137 -143381395 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 2085 112 45 3 chr5 59704142 59704429 -143381103 - AluSg SINE Alu -11 299 1 631 271 36 32 chr5 59704603 59704804 -143380728 - L1ME4a LINE L1 -393 5728 5524 2204 107 7 17 chr5 59704804 59705104 -143380428 + AluSx SINE Alu 4 300 -12 631 271 36 32 chr5 59705104 59705182 -143380350 - L1ME4a LINE L1 -597 5524 5448 17366 32 4 6 chr5 59705329 59708193 -143377339 - L1PA3 LINE L1 0 6155 3310 236 270 160 19 chr5 59708874 59709083 -143376449 + MLT1K LTR MaLR 149 408 -180 414 0 0 0 chr5 59709107 59709153 -143376379 + (TG)n Simple_repeat Simple_repeat 2 47 0 611 234 5 64 chr5 59709197 59709385 -143376147 + MLT1L LTR MaLR 439 615 0 308 345 91 9 chr5 59709468 59709810 -143375722 + L2 LINE L2 2898 3272 0 2211 110 0 3 chr5 59709820 59710121 -143375411 - AluSx SINE Alu -12 300 1 1457 161 32 0 chr5 59710277 59710526 -143375006 - L1MB7 LINE L1 -19 6165 5909 1321 94 26 0 chr5 59710526 59710718 -143374814 - L1MB7 LINE L1 -483 5701 5505 1940 128 10 21 chr5 59711302 59711615 -143373917 - AluSx SINE Alu 0 310 1 2192 113 13 0 chr5 59711645 59711946 -143373586 - AluSg SINE Alu -5 305 1 2286 89 0 0 chr5 59712975 59713312 -143372220 - AluSg SINE Alu 0 337 1 2122 104 42 0 chr5 59713484 59713771 -143371761 + AluSx SINE Alu 5 303 -9 2187 131 0 0 chr5 59713771 59714067 -143371465 + AluSx SINE Alu 1 297 -15 2336 100 0 28 chr5 59714312 59714633 -143370899 - AluSx SINE Alu 0 312 1 425 248 53 0 chr5 59715989 59716122 -143369410 - L1MC4 LINE L1 0 8042 7903 600 199 86 124 chr5 59716129 59716251 -143369281 - L1MC4 LINE L1 -327 7715 7590 2049 128 7 7 chr5 59716251 59716549 -143368983 - AluSx SINE Alu -14 298 1 600 199 86 124 chr5 59716549 59716581 -143368951 - L1MC4 LINE L1 -452 7590 7558 2410 112 0 0 chr5 59716581 59716893 -143368639 + AluSx SINE Alu 1 312 0 600 199 86 124 chr5 59716893 59717004 -143368528 - L1MC4 LINE L1 -484 7558 7459 239 361 33 0 chr5 59717652 59717774 -143367758 + L2 LINE L2 3147 3272 0 237 139 0 0 chr5 59718915 59718958 -143366574 + (T)n Simple_repeat Simple_repeat 1 43 0 216 289 56 33 chr5 59719430 59719520 -143366012 - MIR3 SINE MIR -9 199 108 1467 140 40 16 chr5 59719527 59719777 -143365755 + MLT1B LTR MaLR 1 256 -134 2266 104 0 3 chr5 59719777 59720076 -143365456 - AluSq SINE Alu -15 298 1 884 122 0 0 chr5 59720125 59720270 -143365262 - AluSg/x SINE Alu 0 306 162 2730 132 5 8 chr5 59721779 59722181 -143363351 - MER57A LTR ERV1 -2 401 1 293 289 24 0 chr5 59722284 59722367 -143363165 - L2 LINE L2 0 3272 3188 5066 104 17 191 chr5 59722885 59722982 -143362550 + Tigger1 DNA MER2_type 1362 1474 -944 2345 77 3 0 chr5 59722982 59723295 -143362237 - AluSp SINE Alu 0 314 1 5066 104 17 191 chr5 59723295 59723485 -143362047 + Tigger1 DNA MER2_type 1474 1695 -723 2515 74 3 0 chr5 59723485 59723794 -143361738 + AluSp SINE Alu 1 310 -3 5066 104 17 191 chr5 59723794 59723848 -143361684 + Tigger1 DNA MER2_type 1695 1757 -661 1666 145 64 11 chr5 59723848 59724131 -143361401 + AluJb SINE Alu 9 306 -6 5066 104 17 191 chr5 59724131 59724607 -143360925 + Tigger1 DNA MER2_type 1757 2314 -104 2286 96 0 6 chr5 59724607 59724920 -143360612 + AluSx SINE Alu 1 311 -1 5066 104 17 191 chr5 59724920 59724936 -143360596 + Tigger1 DNA MER2_type 2314 2331 -87 2526 74 3 0 chr5 59724936 59725245 -143360287 + AluSp SINE Alu 1 310 -3 5066 104 17 191 chr5 59725245 59725276 -143360256 + Tigger1 DNA MER2_type 2331 2366 -52 1481 201 20 34 chr5 59725276 59725417 -143360115 + AluJo SINE Alu 1 142 -170 2187 112 0 3 chr5 59725417 59725711 -143359821 + AluSx SINE Alu 1 293 -19 1481 201 20 34 chr5 59725711 59725863 -143359669 + AluJo SINE Alu 142 290 -22 5066 104 17 191 chr5 59725863 59726059 -143359473 + Tigger1 DNA MER2_type 2366 2172 -246 2466 68 0 10 chr5 59726059 59726366 -143359166 + AluSp SINE Alu 2 305 -8 5066 104 17 191 chr5 59726366 59726578 -143358954 + Tigger1 DNA MER2_type 2171 2418 0 348 24 0 0 chr5 59726579 59726620 -143358912 + (CA)n Simple_repeat Simple_repeat 2 42 0 332 54 0 107 chr5 59726622 59726678 -143358854 + MLT2B1 LTR ERVL 466 515 -5 198 244 98 81 chr5 59727130 59727253 -143358279 - MIR3 SINE MIR -36 172 48 2002 138 6 22 chr5 59727626 59727968 -143357564 - AluSx SINE Alu 0 312 1 196 340 173 51 chr5 59728072 59728442 -143357090 - L2 LINE L2 0 3272 2858 2347 88 0 13 chr5 59728799 59729106 -143356426 - AluSg SINE Alu -7 303 1 352 249 79 6 chr5 59729148 59729313 -143356219 - L1ME4a LINE L1 -14 6107 5931 619 264 110 36 chr5 59729325 59729546 -143355986 - L1ME4a LINE L1 -226 5895 5692 288 0 0 0 chr5 59729546 59729578 -143355954 + (TA)n Simple_repeat Simple_repeat 2 33 0 1920 119 45 0 chr5 59729581 59729850 -143355682 - AluSx SINE Alu -31 281 1 619 264 110 36 chr5 59729850 59729987 -143355545 - L1ME4a LINE L1 -430 5691 5506 940 231 51 8 chr5 59730146 59730401 -143355131 - L1ME1 LINE L1 -31 6135 5870 903 168 0 0 chr5 59730425 59730562 -143354970 - AluJo SINE Alu -14 298 162 1034 72 456 0 chr5 59730562 59730757 -143354775 + LTR12 LTR ERV1 2 285 -429 342 231 11 0 chr5 59730757 59730848 -143354684 + LTR30 LTR ERV1 552 643 -79 803 86 57 79 chr5 59730848 59730988 -143354544 + pTR5 LTR ERV1 301 437 -2001 7751 123 106 94 chr5 59730996 59732673 -143352859 + pTR5 LTR ERV1 743 2438 0 1029 113 0 0 chr5 59732680 59732821 -143352711 + HERV9 LTR ERV1 80 220 -8179 * 6874 105 17 24 chr5 59732816 59733837 -143351695 + HERV9 LTR ERV1 4143 5156 -3243 2304 186 93 65 chr5 59733819 59734629 -143350903 + Harlequin LTR ERV1 909 1740 -5156 * 5585 90 24 0 chr5 59734627 59735383 -143350149 + Harlequin LTR ERV1 7626 8399 0 957 86 452 5 chr5 59735383 59735580 -143349952 + LTR12 LTR ERV1 1 285 -429 344 175 0 0 chr5 59735580 59735643 -143349889 + LTR30 LTR ERV1 552 614 -108 719 160 42 0 chr5 59735644 59735763 -143349769 + LTR12 LTR ERV1 357 480 -234 1057 187 0 0 chr5 59735764 59735930 -143349602 - AluJo SINE Alu -146 166 1 203 231 77 31 chr5 59735953 59736018 -143349514 - L2 LINE L2 -565 2749 2682 582 191 78 14 chr5 59736742 59736780 -143348752 + MER69A DNA AcHobo 27 61 -2465 2290 98 0 13 chr5 59736780 59737085 -143348447 - AluSq SINE Alu -12 301 1 582 191 78 14 chr5 59737085 59737187 -143348345 + MER69A DNA AcHobo 61 176 -1 1538 181 47 17 chr5 59737434 59737732 -143347800 - AluJo SINE Alu -5 307 1 367 233 89 0 chr5 59737964 59738054 -143347478 + L2 LINE L2 3173 3270 -2 200 239 76 33 chr5 59738170 59738262 -143347270 - L2 LINE L2 0 3313 3218 1901 149 0 17 chr5 59738328 59738624 -143346908 + AluSx SINE Alu 1 291 -21 2420 77 3 3 chr5 59740610 59740909 -143344623 - AluSp SINE Alu -14 299 1 22 35 0 0 chr5 59740909 59740938 -143344594 + AT_rich Low_complexity Low_complexity 1 29 0 1489 166 33 30 chr5 59740939 59741210 -143344322 - AluJb SINE Alu -23 289 18 2303 105 0 3 chr5 59741223 59741529 -143344003 - AluSq SINE Alu -8 305 1 288 243 0 4 chr5 59741704 59741786 -143343746 - AluJ/monomer SINE Alu -246 55 1 239 305 73 24 chr5 59742111 59742275 -143343257 + L1MC5 LINE L1 7746 7917 -44 4533 83 2 2 chr5 59742726 59743280 -143342252 + MER41A LTR ERV1 1 554 0 24 0 0 0 chr5 59747002 59747026 -143338506 + AT_rich Low_complexity Low_complexity 1 24 0 827 159 90 14 chr5 59747026 59747171 -143338361 - FRAM SINE Alu -23 153 1 4801 173 91 31 chr5 59747191 59748111 -143337421 + Charlie1 DNA MER1_type 1528 2391 -370 2349 97 0 0 chr5 59748111 59748421 -143337111 - AluSg SINE Alu 0 310 1 4801 173 91 31 chr5 59748421 59748458 -143337074 + Charlie1 DNA MER1_type 2391 2424 -337 895 101 0 0 chr5 59748458 59748577 -143336955 - L1MA2 LINE L1 0 6304 6186 4801 173 91 31 chr5 59748577 59748656 -143336876 + Charlie1 DNA MER1_type 2424 2497 -264 2267 109 0 3 chr5 59748656 59748960 -143336572 + AluSq SINE Alu 2 304 -9 4801 173 91 31 chr5 59748960 59749071 -143336461 + Charlie1 DNA MER1_type 2497 2746 -15 23 33 0 0 chr5 59749879 59749909 -143335623 + AT_rich Low_complexity Low_complexity 1 30 0 2383 70 0 3 chr5 59749961 59750259 -143335273 + AluY SINE Alu 1 297 -14 3175 126 137 16 chr5 59750311 59750808 -143334724 + MER39B LTR ERV1 1 579 -74 1811 151 26 20 chr5 59750808 59751113 -143334419 - AluJb SINE Alu -5 307 1 3175 126 137 16 chr5 59751113 59751193 -143334339 + MER39B LTR ERV1 579 648 -5 287 306 31 20 chr5 59751351 59751449 -143334083 - L3b LINE CR1 -71 1512 1414 427 215 32 57 chr5 59751801 59752032 -143333500 + MER5C DNA MER1_type 3 324 0 205 205 0 0 chr5 59752757 59752796 -143332736 + T-rich Low_complexity Low_complexity 1 39 0 318 301 117 15 chr5 59753059 59753255 -143332277 - MIR SINE MIR -1 261 46 390 322 42 0 chr5 59755347 59755465 -143330067 + L2 LINE L2 3133 3255 -17 784 290 20 28 chr5 59755473 59755728 -143329804 - MIR SINE MIR 0 262 10 205 196 36 18 chr5 59756615 59756671 -143328861 + A-rich Low_complexity Low_complexity 2 58 0 1389 113 4 2 chr5 59756838 59757104 -143328428 + AluSq SINE Alu 2 312 -1 214 159 95 63 chr5 59757592 59757655 -143327877 + MIR SINE MIR 197 261 -1 2344 106 0 0 chr5 59757784 59758086 -143327446 - AluSx SINE Alu -10 302 1 5477 180 37 22 chr5 59758449 59758649 -143326883 - Tigger6a DNA MER2_type -514 1083 887 2304 82 0 10 chr5 59758649 59758940 -143326592 - AluSp SINE Alu -25 288 1 5477 180 37 22 chr5 59758940 59759806 -143325726 - Tigger6a DNA MER2_type -710 887 1 2234 99 0 3 chr5 59759853 59760145 -143325387 - AluY SINE Alu -20 291 1 3242 207 99 26 chr5 59760914 59761756 -143323776 - L1MEc LINE L1 -3027 3188 2409 2209 128 0 0 chr5 59761756 59762061 -143323471 - AluSx SINE Alu -7 305 1 3242 207 99 26 chr5 59762061 59762222 -143323310 - L1MEc LINE L1 -3806 2409 2261 2084 111 14 0 chr5 59762222 59762519 -143323013 - AluSg1 SINE Alu -8 301 1 3067 43 0 3 chr5 59762522 59762869 -143322663 - L1PA3 LINE L1 -5 6150 5805 1851 158 21 0 chr5 59762869 59763153 -143322379 - AluJb SINE Alu -20 292 3 3242 207 99 26 chr5 59763153 59763228 -143322304 - L1MEc LINE L1 -3954 2261 2057 1148 234 14 5 chr5 59763228 59763450 -143322082 + MER58A DNA MER1_type 1 224 0 2072 129 17 0 chr5 59763894 59764181 -143321351 + AluSx SINE Alu 1 292 -20 248 277 15 31 chr5 59764223 59764288 -143321244 - MIR SINE MIR -171 91 28 1730 178 29 26 chr5 59764541 59764850 -143320682 - AluJb SINE Alu -2 310 1 373 255 41 28 chr5 59764859 59765004 -143320528 + L1ME4a LINE L1 5926 6072 -49 446 132 123 75 chr5 59765593 59765699 -143319833 - L1MB8 LINE L1 -1 6177 6067 * 933 91 17 97 chr5 59765697 59765758 -143319774 - L1MB8 LINE L1 -346 5832 5768 2306 98 3 0 chr5 59765758 59766054 -143319478 + AluSx SINE Alu 1 297 -15 933 91 17 97 chr5 59766054 59766167 -143319365 - L1MB8 LINE L1 -410 5768 5672 585 229 93 3 chr5 59766303 59766546 -143318986 + L1P5 LINE L1 5172 5439 -712 974 88 37 0 chr5 59766549 59766685 -143318847 + L1MA4 LINE L1 6154 6294 -6 238 205 26 26 chr5 59766702 59766780 -143318752 + L1M4 LINE L1 5427 5504 -680 21 0 0 0 chr5 59766972 59766993 -143318539 + AT_rich Low_complexity Low_complexity 1 21 0 2257 129 0 0 chr5 59767340 59767651 -143317881 + AluSx SINE Alu 1 311 -1 2294 93 3 3 chr5 59768590 59768891 -143316641 - AluSp SINE Alu -12 301 1 2381 97 0 0 chr5 59769049 59769348 -143316184 - AluSg1 SINE Alu -10 299 1 358 331 77 12 chr5 59769555 59769724 -143315808 - L3b LINE CR1 -118 1465 1286 2198 120 7 0 chr5 59769878 59770186 -143315346 + AluSq SINE Alu 2 311 -2 216 0 0 0 chr5 59770561 59770585 -143314947 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2220 126 0 0 chr5 59770765 59771067 -143314465 - AluSx SINE Alu -10 302 1 2399 81 0 0 chr5 59771461 59771757 -143313775 - AluSg SINE Alu -14 296 1 547 223 153 96 chr5 59772109 59772136 -143313396 + MIR SINE MIR 11 35 -227 1512 184 49 7 chr5 59772136 59772424 -143313108 + AluJo SINE Alu 1 300 -12 547 223 153 96 chr5 59772424 59772625 -143312907 + MIR SINE MIR 35 252 -10 1876 145 24 17 chr5 59772650 59772939 -143312593 - AluJo SINE Alu -20 292 2 615 159 71 0 chr5 59773427 59773540 -143311992 + L2 LINE L2 3189 3309 -4 22 70 0 0 chr5 59773728 59773771 -143311761 + AT_rich Low_complexity Low_complexity 1 43 0 2125 72 4 8 chr5 59774661 59774926 -143310606 - AluY SINE Alu -12 299 36 1672 201 27 25 chr5 59775850 59775956 -143309576 + MLT1C LTR MaLR 59 163 -304 1912 118 44 0 chr5 59775956 59776254 -143309278 - AluSx SINE Alu 0 310 1 1672 201 27 25 chr5 59776254 59776554 -143308978 + MLT1C LTR MaLR 163 467 0 373 236 49 126 chr5 59776566 59776812 -143308720 + L1ME LINE L1 3676 3902 -2244 365 236 128 25 chr5 59776834 59777037 -143308495 + L1ME LINE L1 3893 4116 -2030 279 245 0 0 chr5 59777061 59777155 -143308377 + (TA)n Simple_repeat Simple_repeat 2 95 0 2337 102 0 0 chr5 59777179 59777484 -143308048 - AluSq SINE Alu -4 309 5 2298 84 0 3 chr5 59777555 59777853 -143307679 - AluY SINE Alu -1 310 14 1936 133 3 20 chr5 59778012 59778306 -143307226 + AluJb SINE Alu 1 289 -23 310 214 282 0 chr5 59778378 59778481 -143307051 + L1ME2 LINE L1 6023 6154 -10 741 161 39 7 chr5 59778602 59778757 -143306775 + MER106B DNA MER1_type 899 1058 -1 319 220 138 18 chr5 59778758 59778867 -143306665 + L1MC5 LINE L1 7804 7925 -36 227 185 30 170 chr5 59778983 59779046 -143306486 + L1ME LINE L1 4490 4526 -1620 2483 65 0 3 chr5 59779046 59779354 -143306178 + AluY SINE Alu 1 307 -4 227 185 30 170 chr5 59779354 59779425 -143306107 + L1ME LINE L1 4526 4605 -1541 264 225 25 0 chr5 59779471 59779551 -143305981 + L1ME LINE L1 4577 4658 -1488 765 274 121 11 chr5 59779585 59780201 -143305331 + L1ME LINE L1 5150 5823 -339 2375 100 0 7 chr5 59780273 59780583 -143304949 + AluSc SINE Alu 1 308 -1 2188 117 3 0 chr5 59780778 59781078 -143304454 - AluSx SINE Alu -11 301 1 668 200 0 0 chr5 59781079 59781204 -143304328 + FLAM_A SINE Alu 18 142 0 2112 109 10 20 chr5 59781337 59781641 -143303891 + AluSx SINE Alu 1 301 -11 698 148 82 0 chr5 59781911 59782033 -143303499 + FLAM_A SINE Alu 1 132 -1 22 0 0 0 chr5 59782163 59782185 -143303347 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr5 59782874 59782920 -143302612 + AT_rich Low_complexity Low_complexity 1 46 0 2169 125 6 10 chr5 59783147 59783460 -143302072 + AluSx SINE Alu 1 312 0 1603 165 4 0 chr5 59783565 59783813 -143301719 + AluJb SINE Alu 1 249 -63 1712 100 0 21 chr5 59784494 59784630 -143300902 + AluSq SINE Alu 1 131 -182 2321 81 40 0 chr5 59784630 59784928 -143300604 + AluY SINE Alu 2 311 0 1712 100 0 21 chr5 59784928 59785030 -143300502 + AluSq SINE Alu 131 234 -79 459 289 78 5 chr5 59785277 59785589 -143299943 - L1M4 LINE L1 -2180 3966 3622 689 170 0 0 chr5 59785596 59785736 -143299796 - AluSg/x SINE Alu 0 315 176 1832 160 7 3 chr5 59785790 59786078 -143299454 + AluJb SINE Alu 21 309 -3 629 242 8 0 chr5 59786281 59786413 -143299119 - FLAM_A SINE Alu 0 133 1 2395 50 3 13 chr5 59787851 59788149 -143297383 - AluY SINE Alu -16 295 1 212 304 45 18 chr5 59788832 59788944 -143296588 + MIR SINE MIR 142 256 -6 418 261 82 43 chr5 59789118 59789302 -143296230 + MER58C DNA MER1_type 1 191 -24 325 48 0 0 chr5 59789419 59789461 -143296071 + AluY SINE Alu 1 42 -257 1992 112 29 0 chr5 59789461 59789738 -143295794 + AluSg SINE Alu 5 289 -21 1620 152 10 59 chr5 59789743 59790033 -143295499 - AluJb SINE Alu -36 276 1 287 185 0 0 chr5 59890780 59890834 -143194698 - L1MC4 LINE L1 -887 7155 7102 2021 224 127 7 chr5 59890907 59891586 -143193946 - L1MC4 LINE L1 -1794 6014 5255 363 281 142 39 chr5 59891606 59891887 -143193645 - L1MC4 LINE L1 -913 5233 4924 707 276 45 5 chr5 59891893 59892114 -143193418 - L2 LINE L2 -1307 2007 1778 443 104 0 0 chr5 59892208 59892275 -143193257 - LTR33A LTR ERVL 0 523 457 385 331 61 18 chr5 59892275 59892438 -143193094 - MER91A DNA MER1_type -26 170 1 311 213 240 0 chr5 59892439 59892514 -143193018 - MIR SINE MIR -113 149 57 355 117 17 0 chr5 59893176 59893236 -143192296 + MER113 DNA MER1_type? 1 61 -460 271 205 39 0 chr5 59893263 59893341 -143192191 + CT-rich Low_complexity Low_complexity 2 82 0 259 197 0 26 chr5 59893474 59893550 -143191982 + CT-rich Low_complexity Low_complexity 4 77 0 2157 61 44 3 chr5 59893551 59893847 -143191685 - AluY SINE Alu -3 308 1 2091 128 20 0 chr5 59894230 59894528 -143191004 - AluSx SINE Alu -8 304 1 231 315 0 0 chr5 59895132 59895186 -143190346 + L2 LINE L2 3207 3260 -12 224 77 26 0 chr5 59895728 59895767 -143189765 + (AATTG)n Simple_repeat Simple_repeat 4 43 0 1787 100 114 15 chr5 59895926 59896197 -143189335 - AluY SINE Alu -13 298 1 642 182 0 0 chr5 59896214 59896324 -143189208 + AluJo/FLAM SINE Alu 1 110 -202 1432 166 8 12 chr5 59896324 59896599 -143188933 + AluJo SINE Alu 39 312 0 2408 52 3 13 chr5 59896846 59897153 -143188379 - AluY SINE Alu -7 304 1 2135 107 30 0 chr5 59897454 59897752 -143187780 - AluSx SINE Alu -5 307 1 619 171 101 31 chr5 59900212 59900341 -143185191 - FLAM_C SINE Alu -3 140 3 1892 146 14 0 chr5 59900487 59900781 -143184751 - AluSx SINE Alu -14 298 1 2196 103 0 45 chr5 59900824 59901135 -143184397 - AluSx SINE Alu -15 297 1 1986 145 0 3 chr5 59901821 59902117 -143183415 + AluSx SINE Alu 1 295 -17 1147 213 149 8 chr5 59903365 59903727 -143181805 - MLT1D LTR MaLR 0 505 93 2236 120 0 0 chr5 59903736 59904044 -143181488 - AluSx SINE Alu -4 308 1 2189 97 3 26 chr5 59905184 59905495 -143180037 - AluSp SINE Alu -9 304 1 1849 155 13 3 chr5 59905734 59906037 -143179495 - AluJb SINE Alu -6 306 1 446 222 70 3 chr5 59906093 59906260 -143179272 - MER58B DNA MER1_type 0 341 1 1411 179 38 75 chr5 59907266 59907415 -143178117 + AluJo SINE Alu 1 133 -179 2126 116 13 10 chr5 59907415 59907718 -143177814 + AluSc SINE Alu 1 304 -5 1411 179 38 75 chr5 59907718 59907887 -143177645 + AluJo SINE Alu 133 307 -5 965 155 77 10 chr5 59907901 59908108 -143177424 - L1MB3 LINE L1 -28 6155 5935 22 35 0 0 chr5 59908945 59908974 -143176558 + AT_rich Low_complexity Low_complexity 1 29 0 1506 199 0 43 chr5 59909455 59909756 -143175776 + AluJo SINE Alu 4 291 -21 353 262 81 105 chr5 59909757 59909929 -143175603 - HAL1 LINE L1 -1651 856 689 23 0 0 0 chr5 59910424 59910447 -143175085 + AT_rich Low_complexity Low_complexity 1 23 0 511 305 66 34 chr5 59911165 59911544 -143173988 - L1MB3 LINE L1 -352 5818 5414 2060 145 0 3 chr5 59911544 59911847 -143173685 - AluJo SINE Alu -9 303 2 511 305 66 34 chr5 59911847 59912009 -143173523 - L1MB3 LINE L1 -756 5414 5259 275 175 0 0 chr5 59912411 59912468 -143173064 - L1MB2 LINE L1 -1 6170 6114 24 0 0 0 chr5 59912468 59912492 -143173040 + AT_rich Low_complexity Low_complexity 1 24 0 17123 28 6 0 chr5 59912500 59915305 -143170227 - L1PA3 LINE L1 -4 6151 3334 296 252 28 19 chr5 59915336 59915443 -143170089 - L1MB3 LINE L1 -1162 4984 4877 379 310 129 20 chr5 59915467 59915925 -143169607 - L1MB3 LINE L1 -1983 4163 3656 820 256 116 53 chr5 59916035 59916508 -143169024 - L1ME3A LINE L1 0 6170 5668 554 234 170 0 chr5 59916514 59916655 -143168877 + MER5A DNA MER1_type 7 171 -18 187 260 96 67 chr5 59916739 59916843 -143168689 + MIR SINE MIR 30 136 -72 3411 79 31 2 chr5 59917431 59917913 -143167619 - L1PB1 LINE L1 -1 6150 5655 1984 152 0 3 chr5 59918077 59918379 -143167153 + AluSx SINE Alu 3 303 -9 230 91 146 18 chr5 59918379 59918426 -143167106 - L1ME LINE L1 -397 5765 5706 517 254 149 56 chr5 59918434 59919181 -143166351 - L1M4 LINE L1 -2172 3974 3159 270 0 0 0 chr5 59919182 59919212 -143166320 + (A)n Simple_repeat Simple_repeat 1 30 0 1442 173 12 24 chr5 59919221 59919469 -143166063 - AluJo SINE Alu -31 281 37 470 257 51 56 chr5 59919620 59919834 -143165698 - L1M4 LINE L1 -3201 2945 2733 25 31 0 0 chr5 59920197 59920229 -143165303 + AT_rich Low_complexity Low_complexity 1 32 0 205 86 0 29 chr5 59920810 59920845 -143164687 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr5 59921583 59921611 -143163921 + AT_rich Low_complexity Low_complexity 1 28 0 2257 113 7 7 chr5 59921912 59922221 -143163311 - AluSq SINE Alu -2 311 3 22 56 0 0 chr5 59923710 59923746 -143161786 + AT_rich Low_complexity Low_complexity 1 36 0 251 258 72 31 chr5 59924877 59924974 -143160558 - MER5A DNA MER1_type -71 118 18 329 337 112 6 chr5 59925011 59925189 -143160343 + MIR SINE MIR 35 231 -31 216 0 0 0 chr5 59925727 59925751 -143159781 + (TA)n Simple_repeat Simple_repeat 2 25 0 433 345 45 18 chr5 59925886 59926109 -143159423 + MIR SINE MIR 4 232 -30 2015 110 0 47 chr5 59926130 59926430 -143159102 - AluSg SINE Alu -24 286 1 516 175 29 0 chr5 59926535 59926638 -143158894 - L1MD3 LINE L1 0 7995 7890 260 308 13 0 chr5 59927225 59927303 -143158229 + MER5A DNA MER1_type 98 176 -13 1963 111 0 7 chr5 59927471 59927742 -143157790 + AluSx SINE Alu 1 269 -43 863 133 0 22 chr5 59927997 59928132 -143157400 - FLAM_C SINE Alu -1 132 1 850 272 96 47 chr5 59928671 59929244 -143156288 + L1ME4a LINE L1 5301 5901 -220 2310 99 0 7 chr5 59929341 59929644 -143155888 - AluSp SINE Alu -12 301 1 895 157 0 63 chr5 59930144 59930303 -143155229 - FRAM SINE Alu -18 158 10 719 157 0 0 chr5 59930314 59930429 -143155103 + MLT1A1 LTR MaLR 245 359 -6 2305 101 0 13 chr5 59930444 59930752 -143154780 - AluSx SINE Alu -8 304 1 23 68 0 0 chr5 59930820 59930864 -143154668 + AT_rich Low_complexity Low_complexity 1 44 0 856 136 0 16 chr5 59930865 59930990 -143154542 - FLAM_C SINE Alu -20 123 1 1850 171 13 0 chr5 59931316 59931614 -143153918 - AluSx SINE Alu -10 302 1 1036 146 29 12 chr5 59931614 59931785 -143153747 - MER50-int LTR ERV1 -2420 4785 4612 2210 104 0 13 chr5 59931785 59932084 -143153448 - AluSg SINE Alu -15 295 1 638 97 97 0 chr5 59932084 59932187 -143153345 - AluSg SINE Alu -3 307 195 1005 177 0 6 chr5 59932229 59932393 -143153139 - AluSg SINE Alu -90 220 58 772 287 77 7 chr5 59932572 59932844 -143152688 - L1MC4a LINE L1 -1946 5862 5572 21 57 0 0 chr5 59932880 59932915 -143152617 + AT_rich Low_complexity Low_complexity 1 35 0 359 281 25 33 chr5 59932996 59933117 -143152415 - L2 LINE L2 -4 3309 3190 2352 63 40 3 chr5 59934880 59935180 -143150352 + AluY SINE Alu 1 311 0 1524 84 0 0 chr5 59935194 59935385 -143150147 + AluY SINE Alu 118 308 -3 543 177 143 14 chr5 59935392 59935539 -143149993 + MER5A DNA MER1_type 16 181 -8 394 235 58 59 chr5 59935543 59935689 -143149843 + MLT1L LTR MaLR 148 303 -285 365 281 177 12 chr5 59935726 59935890 -143149642 + MLT1L LTR MaLR 418 608 -7 1437 92 72 0 chr5 59936089 59936284 -143149248 - THE1B LTR MaLR 0 364 156 5903 75 20 52 chr5 59936298 59937192 -143148340 + SVA Other Other 1 866 -520 338 225 25 50 chr5 59937294 59937454 -143148078 + A-rich Low_complexity Low_complexity 2 157 0 523 99 0 0 chr5 59937555 59937626 -143147906 - AluSq/x SINE Alu -178 134 64 267 31 0 0 chr5 59938406 59938438 -143147094 + (CA)n Simple_repeat Simple_repeat 2 33 0 591 213 28 14 chr5 59938571 59938712 -143146820 - MER69 DNA AcHobo -4 2522 2380 286 130 19 56 chr5 59938841 59938895 -143146637 - MER69 DNA AcHobo -111 66 15 24 0 0 0 chr5 59940264 59940288 -143145244 + AT_rich Low_complexity Low_complexity 1 24 0 2137 91 0 17 chr5 59940651 59940947 -143144585 - AluSx SINE Alu -9 303 13 337 270 27 68 chr5 59941097 59941245 -143144287 + MIR3 SINE MIR 60 201 -7 189 205 0 0 chr5 59941402 59941441 -143144091 - MIR SINE MIR -106 156 118 1133 144 0 16 chr5 59941594 59941782 -143143750 + AluSg/x SINE Alu 125 309 -3 2481 46 0 0 chr5 59942580 59942894 -143142638 - AluY SINE Alu 0 314 1 2242 111 0 7 chr5 59943101 59943399 -143142133 + AluSx SINE Alu 1 296 -16 362 222 121 0 chr5 59943470 59943569 -143141963 + L2 LINE L2 3192 3302 -11 1588 168 111 18 chr5 59943620 59943953 -143141579 - MLT1A1 LTR MaLR -1 364 1 2228 67 39 3 chr5 59944117 59944401 -143141131 + AluSg SINE Alu 1 294 -16 2405 88 3 0 chr5 59944452 59944760 -143140772 + AluSg SINE Alu 1 309 -1 1893 156 10 10 chr5 59945461 59945762 -143139770 + AluJb SINE Alu 1 301 -11 448 304 170 18 chr5 59945857 59946081 -143139451 - MIR SINE MIR -3 259 2 343 126 53 53 chr5 59946118 59946213 -143139319 + MLT1J2 LTR MaLR 24 118 -332 1286 162 60 4 chr5 59946225 59946460 -143139072 - AluJb SINE Alu 0 312 65 229 333 13 0 chr5 59946563 59946638 -143138894 + MLT1J2 LTR MaLR 226 301 -149 2079 143 0 13 chr5 59946723 59947031 -143138501 + AluSq SINE Alu 1 304 -9 894 131 105 13 chr5 59948382 59948535 -143136997 - FRAM SINE Alu -10 166 1 2936 6 0 0 chr5 59948545 59948856 -143136676 - AluYa5 SINE Alu 0 311 1 2204 99 7 10 chr5 59949127 59949420 -143136112 - AluSx SINE Alu -20 292 1 263 111 0 0 chr5 59949448 59949484 -143136048 + Alu SINE Alu 1 36 -266 193 155 138 35 chr5 59949997 59950055 -143135477 - MER5A DNA MER1_type -24 165 102 1733 151 59 0 chr5 59950108 59950380 -143135152 + AluJo SINE Alu 1 288 -24 2376 107 0 0 chr5 59950711 59951021 -143134511 + AluSx SINE Alu 1 310 -2 2276 112 0 10 chr5 59951034 59951337 -143134195 + AluSx SINE Alu 1 300 -12 2303 48 19 63 chr5 59951817 59952133 -143133399 - AluY SINE Alu -9 302 1 2041 137 0 10 chr5 59953313 59953613 -143131919 + AluSx SINE Alu 3 299 -13 2420 53 0 26 chr5 59953986 59954290 -143131242 + AluY SINE Alu 1 296 -15 2334 71 0 3 chr5 59955015 59955323 -143130209 + AluY SINE Alu 1 307 0 1694 153 27 17 chr5 59955524 59955819 -143129713 + AluJo SINE Alu 2 299 -13 458 243 104 107 chr5 59955964 59956244 -143129288 - L1MC4 LINE L1 -17 8025 7648 1319 140 5 28 chr5 59956244 59956458 -143129074 + AluJb SINE Alu 85 293 -19 2255 107 17 0 chr5 59956491 59956790 -143128742 + AluJb SINE Alu 1 304 -8 1076 93 0 0 chr5 59957074 59957214 -143128318 - AluSp/q SINE Alu -2 311 172 2067 132 3 0 chr5 59958172 59958460 -143127072 - AluSx SINE Alu -23 289 1 2195 94 17 3 chr5 59959041 59959339 -143126193 + AluSq SINE Alu 1 302 -11 515 328 123 26 chr5 59960025 59960570 -143124962 + L2 LINE L2 1404 2001 -1313 1980 139 10 23 chr5 59960579 59960888 -143124644 + AluJb SINE Alu 1 305 -7 1723 152 6 73 chr5 59961031 59961361 -143124171 - AluJb SINE Alu -4 308 1 462 325 34 21 chr5 59961362 59961599 -143123933 + L2 LINE L2 2308 2547 -767 1110 174 104 14 chr5 59961605 59961817 -143123715 - MER8 DNA MER2_type -1 238 8 2280 91 17 3 chr5 59961870 59962167 -143123365 - AluSx SINE Alu -8 304 4 2138 98 9 28 chr5 59962179 59962497 -143123035 - AluSx SINE Alu 0 312 1 1891 96 0 19 chr5 59962677 59962937 -143122595 - AluSg SINE Alu -53 257 3 299 182 91 81 chr5 59963022 59963085 -143122447 - MER94 DNA DNA -34 100 33 2302 72 7 0 chr5 59963085 59963385 -143122147 - AluSc SINE Alu 0 302 1 299 182 91 81 chr5 59963385 59963419 -143122113 - MER94 DNA DNA -101 33 1 1706 148 44 40 chr5 59963839 59964136 -143121396 + AluJo SINE Alu 1 298 -14 383 338 81 55 chr5 59964789 59965032 -143120500 - L3 LINE CR1 -13 1564 1329 1323 224 125 9 chr5 59965032 59965160 -143120372 + MLT1A2 LTR MaLR 1 113 -261 2381 91 7 0 chr5 59965160 59965457 -143120075 + AluSg SINE Alu 1 299 -11 1323 224 125 9 chr5 59965457 59965663 -143119869 + MLT1A2 LTR MaLR 113 374 0 383 338 81 55 chr5 59965663 59965679 -143119853 - L3 LINE CR1 -248 1329 1315 2252 116 0 3 chr5 59965679 59965990 -143119542 - AluY SINE Alu -1 310 1 383 338 81 55 chr5 59965990 59966069 -143119463 - L3 LINE CR1 -262 1315 1239 1974 96 104 0 chr5 59966069 59966339 -143119193 + AluSq SINE Alu 1 298 -15 383 338 81 55 chr5 59966339 59966631 -143118901 - L3 LINE CR1 -338 1239 916 204 167 0 0 chr5 59966765 59966813 -143118719 + A-rich Low_complexity Low_complexity 1 48 0 337 314 9 9 chr5 59966935 59967040 -143118492 + MIR SINE MIR 31 135 -73 505 217 39 16 chr5 59967404 59967533 -143117999 - L2 LINE L2 -10 3303 3172 2341 87 0 0 chr5 59967563 59967852 -143117680 + AluSc SINE Alu 1 289 -20 697 120 0 0 chr5 59969178 59969278 -143116254 - AluSg/x SINE Alu -19 291 192 2084 132 3 25 chr5 59969309 59969628 -143115904 + AluSx SINE Alu 1 312 0 471 255 43 43 chr5 59969692 59969853 -143115679 - MER5B DNA MER1_type -5 173 13 1127 160 11 0 chr5 59969959 59970146 -143115386 + MER5A DNA MER1_type 1 189 0 1666 166 46 26 chr5 59970751 59971053 -143114479 - AluJb SINE Alu -4 308 1 2248 79 0 23 chr5 59971060 59971364 -143114168 - AluY SINE Alu -14 297 1 24 0 0 0 chr5 59971833 59971857 -143113675 + AT_rich Low_complexity Low_complexity 1 24 0 1762 111 105 151 chr5 59972702 59972803 -143112729 - MSTC LTR MaLR 0 428 324 2749 7 0 0 chr5 59972803 59973101 -143112431 - AluYa5 SINE Alu -13 298 1 1762 111 105 151 chr5 59973101 59973403 -143112129 - MSTC LTR MaLR -104 324 46 2288 110 7 3 chr5 59973403 59973712 -143111820 + AluSq SINE Alu 1 310 -3 1762 111 105 151 chr5 59973712 59973756 -143111776 - MSTC LTR MaLR -382 46 1 2612 198 86 71 chr5 59974210 59975024 -143110508 + LTR1B LTR ERV1 1 826 0 1348 241 73 44 chr5 59975088 59975607 -143109925 - L1ME1 LINE L1 -14 6152 5619 2049 133 0 3 chr5 59975700 59975986 -143109546 - AluSx SINE Alu -15 297 13 722 170 18 47 chr5 59975996 59976167 -143109365 + L1MB5 LINE L1 6009 6174 0 1239 138 0 0 chr5 59976258 59976432 -143109100 - AluSq SINE Alu -10 303 130 1465 179 6 80 chr5 59978509 59978641 -143106891 + AluJo SINE Alu 2 142 -170 2140 78 7 4 chr5 59978641 59978922 -143106610 + AluSc SINE Alu 1 282 -27 1465 179 6 80 chr5 59978922 59979101 -143106431 + AluJo SINE Alu 142 290 -22 2450 73 0 0 chr5 59979103 59979403 -143106129 + AluY SINE Alu 1 300 -11 288 0 0 0 chr5 59979490 59979522 -143106010 + (GA)n Simple_repeat Simple_repeat 1 32 0 2357 86 3 0 chr5 59980550 59980842 -143104690 + AluSp SINE Alu 1 293 -20 531 179 0 86 chr5 59980856 59980973 -143104559 + L1ME LINE L1 5477 5583 -583 1474 138 53 50 chr5 59980973 59981314 -143104218 + MER4A LTR ERV1 1 342 -322 2219 105 0 3 chr5 59981316 59981611 -143103921 + AluSg SINE Alu 1 294 -16 604 141 194 75 chr5 59981624 59981881 -143103651 + MER4C LTR ERV1 157 446 -19 435 188 0 0 chr5 59981901 59981981 -143103551 + L1ME LINE L1 5580 5659 -507 607 295 66 40 chr5 59982052 59982354 -143103178 - L2 LINE L2 -444 2870 2561 2504 55 0 0 chr5 59982402 59982695 -143102837 - AluY SINE Alu -18 293 1 224 224 0 20 chr5 59982843 59982892 -143102640 + CT-rich Low_complexity Low_complexity 4 51 0 1903 135 0 18 chr5 59982892 59983174 -143102358 - AluSx SINE Alu -35 277 1 202 277 193 18 chr5 59983181 59983347 -143102185 + L3 LINE CR1 1375 1569 -8 299 208 111 0 chr5 59983654 59983726 -143101806 + MER58B DNA MER1_type 11 90 -251 2576 65 0 7 chr5 59983750 59984059 -143101473 + AluSp SINE Alu 1 307 -6 4443 158 52 14 chr5 59984119 59984634 -143100898 + L1MB4 LINE L1 5127 5621 -559 2223 92 24 3 chr5 59984634 59984926 -143100606 + AluSx SINE Alu 1 298 -14 4443 158 52 14 chr5 59984926 59985425 -143100107 + L1MB4 LINE L1 5621 6180 0 513 133 11 22 chr5 59985423 59985513 -143100019 - L1MD1 LINE L1 -53 6189 6101 * 1293 97 0 0 chr5 59985514 59985679 -143099853 + AluSx SINE Alu 2 166 -146 290 214 14 0 chr5 59985679 59985749 -143099783 - L1MD2 LINE L1 -144 6215 6145 932 182 63 51 chr5 59985751 59985879 -143099653 + MER58B DNA MER1_type 86 211 -2209 2285 113 27 0 chr5 59985879 59986179 -143099353 - AluSx SINE Alu -4 308 1 932 182 63 51 chr5 59986179 59986303 -143099229 + MER58B DNA MER1_type 211 341 0 763 270 119 65 chr5 59986578 59987008 -143098524 - MLT1L LTR MaLR -13 602 197 2301 110 0 0 chr5 59987008 59987307 -143098225 + AluSx SINE Alu 1 299 -13 763 270 119 65 chr5 59987307 59987398 -143098134 - MLT1L LTR MaLR -418 197 112 2064 115 21 0 chr5 59987398 59987685 -143097847 + AluSx SINE Alu 5 297 -15 763 270 119 65 chr5 59987685 59987733 -143097799 - MLT1L LTR MaLR -503 112 1 26 0 0 0 chr5 59987810 59987836 -143097696 + AT_rich Low_complexity Low_complexity 1 26 0 1280 146 9 5 chr5 59987937 59988149 -143097383 + AluSg/x SINE Alu 80 292 -20 5929 98 27 2 chr5 59988825 59990137 -143095395 - L1PA15 LINE L1 -1 6164 4830 721 193 0 0 chr5 59990137 59990277 -143095255 + L1P LINE L1 4203 4342 -1804 * 1404 144 54 7 chr5 59990276 59990554 -143094978 + L1 LINE L1 4541 4831 -1315 2004 134 10 7 chr5 59990558 59990863 -143094669 - AluSx SINE Alu -6 306 1 1205 232 171 39 chr5 59991845 59992581 -143092951 - L1ME3A LINE L1 -28 6142 5298 2120 82 50 0 chr5 59992640 59992920 -143092612 + AluSx SINE Alu 1 294 -18 652 294 55 3 chr5 59992933 59993225 -143092307 - L1ME3A LINE L1 -1150 4996 4690 1712 147 120 21 chr5 59993226 59993608 -143091924 + MSTB1 LTR MaLR 1 420 -12 271 235 25 12 chr5 59993620 59993701 -143091831 - L1ME3A LINE L1 -1452 4694 4613 1613 138 16 4 chr5 59993703 59993956 -143091576 - MLT1A1 LTR MaLR 0 365 110 2335 155 54 48 chr5 59993958 59994320 -143091212 - L1M4 LINE L1 -390 6292 5934 1771 178 10 7 chr5 59994320 59994623 -143090909 - AluJb SINE Alu -8 304 1 2335 155 54 48 chr5 59994623 59994846 -143090686 - L1M4 LINE L1 -748 5934 5714 1929 168 0 7 chr5 59994846 59995149 -143090383 - AluJo SINE Alu -11 301 1 2335 155 54 48 chr5 59995149 59995461 -143090071 - L1M4 LINE L1 -968 5714 5402 451 186 39 0 chr5 59995471 59995573 -143089959 - L1M4 LINE L1 -4850 1692 1587 2000 189 102 8 chr5 59995573 59996081 -143089451 - L1MB4 LINE L1 -3 6177 5622 673 219 128 5 chr5 59996078 59996274 -143089258 - L1M4 LINE L1 -6318 224 5 * 2297 103 3 0 chr5 59996536 59996838 -143088694 + AluSx SINE Alu 1 303 -9 299 268 85 65 chr5 59996894 59997140 -143088392 + L1MEd LINE L1 1227 1477 -4895 319 291 104 72 chr5 59997215 59997559 -143087973 + L1MEd LINE L1 1527 1825 -4559 658 190 41 8 chr5 59998019 59998140 -143087392 + AluJb SINE Alu 1 125 -187 931 87 0 0 chr5 59998168 59998283 -143087249 + 5S rRNA rRNA 3 117 -4 1212 89 11 11 chr5 59998283 59998462 -143087070 + L1PA10 LINE L1 5987 6165 -3 322 241 0 36 chr5 59998916 59999028 -143086504 + L1MEd LINE L1 3149 3256 -3126 2319 99 0 0 chr5 59999309 59999603 -143085929 + AluSx SINE Alu 1 294 -18 229 246 158 44 chr5 60000786 60000900 -143084632 + MIR SINE MIR 114 240 -22 256 212 61 0 chr5 60001565 60001631 -143083901 + (TTTAG)n Simple_repeat Simple_repeat 5 74 0 2045 133 17 0 chr5 60002192 60002486 -143083046 + AluSx SINE Alu 1 299 -13 358 271 104 7 chr5 60002876 60003020 -143082512 + L1MC/D LINE L1 5611 5768 -2040 1923 106 23 4 chr5 60003022 60003287 -143082245 + AluSc SINE Alu 3 272 -37 2280 105 13 0 chr5 60003484 60003789 -143081743 - AluSx SINE Alu -3 309 1 3073 134 8 71 chr5 60004280 60004331 -143081201 - MLT2B3 LTR ERVL 0 554 501 606 28 0 0 chr5 60004331 60004403 -143081129 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 3073 134 8 71 chr5 60004403 60004539 -143080993 - MLT2B3 LTR ERVL -53 501 358 2097 97 7 0 chr5 60004539 60004828 -143080704 - L1PA6 LINE L1 0 6154 5864 3073 134 8 71 chr5 60004828 60005230 -143080302 - MLT2B3 LTR ERVL -196 358 1 2244 172 43 47 chr5 60005230 60005719 -143079813 + MER68 LTR ERV1 76 562 0 1542 198 46 3 chr5 60008890 60009173 -143076359 + AluJo SINE Alu 1 295 -17 238 250 31 97 chr5 60009387 60009481 -143076051 - L1ME LINE L1 -357 5764 5688 1710 180 28 3 chr5 60009481 60009770 -143075762 + AluJb SINE Alu 1 296 -16 238 250 31 97 chr5 60009770 60009871 -143075661 - L1ME LINE L1 -433 5688 5582 1210 219 201 35 chr5 60009922 60010318 -143075214 - MLT1F1 LTR MaLR -4 563 71 905 221 0 22 chr5 60010318 60010499 -143075033 - MER45A DNA AcHobo 0 178 2 1210 219 201 35 chr5 60010499 60010585 -143074947 - MLT1F1 LTR MaLR -496 71 1 464 98 12 0 chr5 60010732 60010814 -143074718 + L1PB2 LINE L1 6069 6151 0 2327 104 0 3 chr5 60010836 60011143 -143074389 - AluSx SINE Alu -6 306 1 361 329 81 47 chr5 60011489 60011723 -143073809 - MIR SINE MIR -13 249 8 723 193 82 72 chr5 60012375 60012527 -143073005 - MER3 DNA MER1_type 0 209 53 2188 101 0 47 chr5 60012527 60012845 -143072687 + AluSc SINE Alu 1 303 -6 723 193 82 72 chr5 60012845 60012899 -143072633 - MER3 DNA MER1_type -156 53 1 1485 73 5 0 chr5 60013046 60013238 -143072294 - AluY SINE Alu 0 311 119 29 28 0 0 chr5 60013511 60013547 -143071985 + AT_rich Low_complexity Low_complexity 1 36 0 345 24 0 0 chr5 60013721 60013763 -143071769 + (TG)n Simple_repeat Simple_repeat 2 43 0 436 182 0 11 chr5 60014126 60014214 -143071318 + Tigger5 DNA MER2_type 2237 2323 0 588 323 70 47 chr5 60014224 60014713 -143070819 - ERVL LTR ERVL -816 4948 4449 293 188 167 14 chr5 60014728 60014866 -143070666 + HsTC2 DNA Tc2 1713 1871 -27 2322 77 0 55 chr5 60014872 60015197 -143070335 - AluSq SINE Alu -6 307 1 190 357 54 27 chr5 60015348 60015460 -143070072 - L2 LINE L2 -6 3307 3193 2362 90 3 0 chr5 60015661 60015962 -143069570 - AluSp SINE Alu -11 302 1 1761 181 0 17 chr5 60016185 60016473 -143069059 + AluJb SINE Alu 1 283 -29 1799 196 73 75 chr5 60016492 60017038 -143068494 - MLT2B3 LTR ERVL -8 546 2 222 337 114 24 chr5 60017045 60017211 -143068321 + L2 LINE L2 2524 2704 -610 1822 145 3 40 chr5 60017517 60017841 -143067691 - AluJb SINE Alu 0 312 1 229 336 142 0 chr5 60017998 60018111 -143067421 + L2 LINE L2 3139 3267 -5 21 36 0 0 chr5 60019306 60019334 -143066198 + AT_rich Low_complexity Low_complexity 1 28 0 1540 204 27 3 chr5 60019762 60020056 -143065476 - AluJo SINE Alu -7 305 5 1839 174 3 10 chr5 60020063 60020373 -143065159 - AluJb SINE Alu -4 308 1 721 229 14 0 chr5 60020794 60020934 -143064598 - MIR SINE MIR -29 233 92 2421 80 0 3 chr5 60021022 60021321 -143064211 - AluY SINE Alu -13 298 1 507 234 71 44 chr5 60021710 60021804 -143063728 - LTR37A LTR ERV1 -68 358 268 1235 113 24 97 chr5 60021804 60022052 -143063480 - MER30 DNA MER1_type 0 230 1 507 234 71 44 chr5 60022052 60022183 -143063349 - LTR37A LTR ERV1 -158 268 127 1251 235 47 92 chr5 60022521 60023294 -143062238 - MER31-int LTR ERV1 -876 4060 3323 3021 43 13 0 chr5 60023654 60024028 -143061504 - L1PA5 LINE L1 -3 6151 5773 41319 41 3 1 chr5 60024028 60030162 -143055370 - L1PA3 LINE L1 -6 6149 2 254 213 0 33 chr5 60030254 60030315 -143055217 - Charlie1 DNA MER1_type -2667 94 36 213 377 0 13 chr5 60030414 60030491 -143055041 + MER5B DNA MER1_type 103 178 0 1027 154 109 41 chr5 60030750 60030799 -143054733 - MER46A DNA MER2_type -2496 235 191 2262 113 0 0 chr5 60030799 60031101 -143054431 - AluSq SINE Alu -11 302 1 1027 154 109 41 chr5 60031101 60031271 -143054261 - MER46A DNA MER2_type -2540 191 1 318 252 69 80 chr5 60031317 60031666 -143053866 - MER31-int LTR ERV1 -1987 2949 2605 183 204 0 0 chr5 60031688 60031732 -143053800 + T-rich Low_complexity Low_complexity 1 44 0 260 296 12 0 chr5 60032045 60032126 -143053406 + Charlie1 DNA MER1_type 30 111 -2650 294 213 131 16 chr5 60032147 60032269 -143053263 + Charlie1 DNA MER1_type 2625 2760 -1 272 170 18 89 chr5 60032855 60032967 -143052565 - MER31-int LTR ERV1 -3650 1286 1183 2517 44 0 10 chr5 60032976 60033273 -143052259 + AluY SINE Alu 1 294 -17 240 276 230 0 chr5 60033510 60033597 -143051935 + L2 LINE L2 3166 3272 0 205 247 24 94 chr5 60034188 60034273 -143051259 - L2 LINE L2 -26 3246 3168 246 285 57 8 chr5 60035035 60035158 -143050374 + MIR SINE MIR 124 252 -10 2000 134 21 3 chr5 60035169 60035459 -143050073 - AluSg SINE Alu -15 295 1 2072 125 3 52 chr5 60036428 60036756 -143048776 - AluSx SINE Alu 0 312 1 26 0 0 0 chr5 60037105 60037131 -143048401 + AT_rich Low_complexity Low_complexity 1 26 0 2072 94 31 10 chr5 60038141 60038429 -143047103 - AluSg SINE Alu -16 294 1 664 79 0 0 chr5 60038942 60039031 -143046501 + L1PA5 LINE L1 6066 6154 0 1635 119 39 17 chr5 60039605 60039963 -143045569 - Tigger4(Zombi) DNA MER2_type 0 2731 1 394 285 133 7 chr5 60040597 60040748 -143044784 - HAL1 LINE L1 -1197 1310 1141 2041 139 88 10 chr5 60040966 60041376 -143044156 - Tigger5 DNA MER2_type 0 2323 1882 942 203 55 23 chr5 60041371 60041588 -143043944 - Tigger5 DNA MER2_type -2085 238 15 * 447 168 248 0 chr5 60042048 60042149 -143043383 - FLAM_C SINE Alu -6 127 2 215 241 172 17 chr5 60044361 60044419 -143041113 + MIR SINE MIR 36 102 -160 2827 201 102 9 chr5 60044421 60045178 -143040354 - L1ME3 LINE L1 0 6162 5336 2727 175 27 70 chr5 60045208 60045848 -143039684 - LTR9 LTR ERV1 0 612 1 1005 256 76 39 chr5 60045959 60046342 -143039190 - MLT1J2 LTR MaLR -8 442 46 1153 156 48 12 chr5 60047134 60047430 -143038102 - MER3 DNA MER1_type 0 2580 2233 625 136 18 0 chr5 60047437 60047547 -143037985 - MER3 DNA MER1_type -87 122 58 2023 194 162 38 chr5 60048532 60049144 -143036388 - MER76 LTR ERV 0 688 1 514 195 44 9 chr5 60049184 60049297 -143036235 + HsTC2 DNA Tc2 8 124 -1774 237 203 34 0 chr5 60049294 60049353 -143036179 + HsTC2 DNA Tc2 1230 1290 -608 * 1614 286 41 19 chr5 60050414 60050946 -143034586 - MLT1E LTR MaLR 0 593 50 226 205 39 13 chr5 60051467 60051545 -143033987 - L1MCc LINE L1 -6321 102 23 192 77 0 0 chr5 60051697 60051723 -143033809 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1807 144 49 38 chr5 60052277 60052644 -143032888 + THE1C LTR MaLR 1 371 -4 2108 129 111 35 chr5 60052847 60053243 -143032289 + MSTB LTR MaLR 1 426 0 2059 59 55 7 chr5 60054334 60054634 -143030898 + AluY SINE Alu 1 313 0 588 193 33 67 chr5 60054649 60054799 -143030733 - MER45A DNA AcHobo 0 178 34 401 131 0 0 chr5 60055098 60055159 -143030373 + AluJ/FLAM SINE Alu 1 61 -251 1516 110 10 0 chr5 60055160 60055369 -143030163 + AluSp SINE Alu 95 305 -8 188 273 13 65 chr5 60055432 60055509 -143030023 + L2 LINE L2 3155 3227 -45 299 222 0 12 chr5 60055599 60055680 -143029852 - LTR16A LTR ERVL -81 369 290 1448 172 34 89 chr5 60055694 60055860 -143029672 - AluJo SINE Alu -4 308 167 2174 139 0 0 chr5 60055860 60056155 -143029377 - AluSx SINE Alu -17 295 1 1448 172 34 89 chr5 60056155 60056314 -143029218 - AluJo SINE Alu -145 167 1 314 197 26 53 chr5 60056314 60056379 -143029153 - MER5A DNA MER1_type -115 74 10 269 309 40 40 chr5 60056930 60057105 -143028427 + MARNA DNA Mariner 1 175 -411 929 137 42 90 chr5 60057120 60057332 -143028200 + MER105 DNA DNA 3 204 0 32 26 0 0 chr5 60057401 60057440 -143028092 + AT_rich Low_complexity Low_complexity 1 39 0 862 190 151 11 chr5 60057624 60057653 -143027879 - MER33 DNA MER1_type -2261 324 300 2071 116 20 0 chr5 60057653 60057945 -143027587 + AluSx SINE Alu 1 298 -14 862 190 151 11 chr5 60057945 60058199 -143027333 - MER33 DNA MER1_type -2285 300 1 209 278 19 0 chr5 60058316 60058370 -143027162 + CT-rich Low_complexity Low_complexity 2 56 0 460 248 33 0 chr5 60058373 60058494 -143027038 - L2 LINE L2 -1175 2139 2015 477 207 140 18 chr5 60058494 60058658 -143026874 - MER63B DNA MER1_type -3 432 249 1227 164 66 27 chr5 60060769 60061025 -143024507 - MER63B DNA MER1_type -170 266 1 448 290 32 42 chr5 60061025 60061242 -143024290 - L2 LINE L2 -1289 2025 1811 392 318 70 68 chr5 60061285 60061640 -143023892 + L2 LINE L2 2890 3245 -27 836 167 26 13 chr5 60062455 60062611 -143022921 - MLT1C LTR MaLR -8 459 302 820 146 16 0 chr5 60062630 60062753 -143022779 - FLAM_C SINE Alu -18 125 1 748 202 73 65 chr5 60062754 60063040 -143022492 - MLT1C LTR MaLR -151 316 15 183 337 43 119 chr5 60063143 60063446 -143022086 + L2 LINE L2 2944 3223 -49 1293 248 3 0 chr5 60064190 60064553 -143020979 - L1MCa LINE L1 -3549 2877 2514 444 97 14 0 chr5 60064688 60064760 -143020772 - L1PA16 LINE L1 -9 6157 6085 1705 128 34 17 chr5 60064760 60065205 -143020327 + L1MCa LINE L1 1484 2023 -4403 6308 168 71 24 chr5 60065221 60066118 -143019414 - L1MCa LINE L1 -4960 1466 480 1754 153 40 35 chr5 60066118 60066491 -143019041 + THE1C LTR MaLR 1 375 0 6308 168 71 24 chr5 60066491 60066975 -143018557 - L1MCa LINE L1 -5946 480 20 509 211 137 50 chr5 60067092 60067237 -143018295 + MIR3 SINE MIR 32 194 -14 1783 108 21 0 chr5 60067237 60067477 -143018055 + AluSg SINE Alu 47 291 -19 509 211 137 50 chr5 60067477 60067492 -143018040 + MIR3 SINE MIR 194 206 -2 2836 172 106 119 chr5 60067583 60067637 -143017895 - L1MC3 LINE L1 -2 7783 7730 2186 108 48 0 chr5 60067637 60067970 -143017562 + AluSg SINE Alu 1 310 0 2836 172 106 119 chr5 60067970 60067983 -143017549 - L1MC3 LINE L1 -55 7730 7718 1967 110 46 18 chr5 60067983 60068264 -143017268 + AluSx SINE Alu 1 289 -23 2836 172 106 119 chr5 60068264 60068811 -143016721 - L1MC3 LINE L1 -67 7718 7088 284 196 0 124 chr5 60068811 60068908 -143016624 - MLT1F1 LTR MaLR -448 119 35 2836 172 106 119 chr5 60068908 60069237 -143016295 - L1MC3 LINE L1 -697 7088 6756 275 281 18 18 chr5 60069264 60069378 -143016154 - L1ME LINE L1 -393 5728 5615 3766 251 71 35 chr5 60069738 60071275 -143014257 - HAL1 LINE L1 0 2507 916 3100 182 18 41 chr5 60071418 60071480 -143014052 + MER82 DNA MER2_type 9 71 -582 2336 92 3 16 chr5 60071480 60071795 -143013737 + AluSp SINE Alu 2 312 -1 3100 182 18 41 chr5 60071795 60072391 -143013141 + MER82 DNA MER2_type 71 652 -1 304 278 95 78 chr5 60072396 60072691 -143012841 - HAL1 LINE L1 -2207 300 1 222 0 35 0 chr5 60072827 60072856 -143012676 + (TTTTA)n Simple_repeat Simple_repeat 2 120 0 2263 87 3 7 chr5 60072856 60073142 -143012390 - AluSq SINE Alu -1 313 1 222 274 97 0 chr5 60073395 60073457 -143012075 - MIR3 SINE MIR -27 181 114 * 823 260 63 9 chr5 60073441 60073664 -143011868 + MIR SINE MIR 28 262 0 204 40 0 0 chr5 60073965 60073990 -143011542 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 422 330 37 23 chr5 60074615 60074830 -143010702 + MIR SINE MIR 12 229 -33 341 182 0 15 chr5 60075034 60075100 -143010432 + MER116 DNA Mariner 16 80 0 2207 128 0 0 chr5 60075133 60075445 -143010087 + AluSx SINE Alu 1 312 0 32 26 0 0 chr5 60075453 60075492 -143010040 + AT_rich Low_complexity Low_complexity 1 39 0 1278 151 17 54 chr5 60075817 60076056 -143009476 - AluJo SINE Alu -12 300 71 1909 175 0 0 chr5 60076558 60076867 -143008665 - AluSx SINE Alu -3 309 1 1951 151 0 10 chr5 60077768 60078072 -143007460 - AluJb SINE Alu -11 301 1 231 315 43 43 chr5 60078472 60078564 -143006968 + L2 LINE L2 3190 3281 -32 255 300 11 44 chr5 60078566 60078656 -143006876 - MIR SINE MIR -165 97 11 24 0 0 0 chr5 60078785 60078809 -143006723 + AT_rich Low_complexity Low_complexity 1 24 0 271 333 100 74 chr5 60079466 60079845 -143005687 - L2 LINE L2 -13 3259 2871 1996 140 23 38 chr5 60080544 60080758 -143004774 - MER44D DNA MER2_type -1883 608 392 2171 122 7 0 chr5 60080758 60081052 -143004480 + AluSx SINE Alu 1 296 -16 1996 140 23 38 chr5 60081052 60081179 -143004353 - MER44D DNA MER2_type -2099 392 2 2119 151 85 19 chr5 60081462 60081827 -143003705 - MLT1B LTR MaLR -1 389 1 2196 123 55 19 chr5 60081958 60082283 -143003249 + MER1B DNA MER1_type 1 337 0 1620 197 13 51 chr5 60082850 60083071 -143002461 - L1MD3 LINE L1 -5 7990 7787 2189 101 0 26 chr5 60083071 60083379 -143002153 - AluSg SINE Alu -10 300 1 1620 197 13 51 chr5 60083379 60083532 -143002000 - L1MD3 LINE L1 -208 7787 7630 383 214 204 0 chr5 60083989 60084092 -143001440 - MLT1I LTR MaLR -1 408 285 653 56 51 39 chr5 60084946 60085124 -143000408 + (CA)n Simple_repeat Simple_repeat 1 180 0 392 91 49 42 chr5 60085172 60085315 -143000217 + (CA)n Simple_repeat Simple_repeat 2 145 0 450 127 37 45 chr5 60085362 60085610 -142999922 + (CA)n Simple_repeat Simple_repeat 1 245 0 2167 97 19 89 chr5 60086971 60087332 -142998200 - MER1B DNA MER1_type -1 336 1 813 106 0 33 chr5 60087743 60088010 -142997522 + (TG)n Simple_repeat Simple_repeat 1 258 0 1944 173 8 92 chr5 60088025 60088307 -142997225 - Charlie4a DNA MER1_type -1485 476 253 2877 67 8 17 chr5 60088307 60088663 -142996869 - THE1A LTR MaLR 0 355 3 1944 173 8 92 chr5 60088663 60088882 -142996650 - Charlie4a DNA MER1_type -1708 253 17 205 158 26 0 chr5 60089968 60090006 -142995526 + MIR SINE MIR 67 105 -103 27 0 0 0 chr5 60090080 60090107 -142995425 + AT_rich Low_complexity Low_complexity 1 27 0 2184 124 0 0 chr5 60090158 60090448 -142995084 - AluSx SINE Alu -22 290 1 189 233 137 41 chr5 60090578 60090651 -142994881 - L3b LINE CR1 -208 1375 1296 1385 253 15 12 chr5 60090717 60091057 -142994475 - MER58B DNA MER1_type 0 341 1 253 353 74 0 chr5 60091522 60091644 -142993888 - L2 LINE L2 -210 3062 2932 1096 208 78 0 chr5 60091669 60091900 -142993632 - MIR SINE MIR 0 262 14 199 214 0 24 chr5 60091950 60091992 -142993540 + MIR3 SINE MIR 164 204 -4 247 223 41 74 chr5 60092292 60092413 -142993119 - L1ME4a LINE L1 -72 6049 5933 275 158 0 18 chr5 60093269 60093326 -142992206 + GA-rich Low_complexity Low_complexity 3 58 0 23 0 0 0 chr5 60093479 60093502 -142992030 + AT_rich Low_complexity Low_complexity 1 23 0 8235 175 45 16 chr5 60093561 60096200 -142989332 - L1MB7 LINE L1 -1 6183 3474 364 83 0 0 chr5 60096683 60096731 -142988801 + MADE1 DNA Mariner 1 48 -32 2334 86 0 0 chr5 60096805 60097085 -142988447 + AluSc SINE Alu 6 285 -24 5660 217 47 43 chr5 60097274 60097440 -142988092 - L1M4c LINE L1 -3925 2900 2736 675 233 31 0 chr5 60097440 60097569 -142987963 - FLAM_C SINE Alu 0 133 1 5660 217 47 43 chr5 60097569 60099327 -142986205 - L1M4c LINE L1 -4089 2736 826 1786 177 10 3 chr5 60099327 60099626 -142985906 - AluJb SINE Alu -11 301 1 5660 217 47 43 chr5 60099626 60099652 -142985880 - L1M4c LINE L1 -5999 826 802 321 276 51 86 chr5 60099927 60100100 -142985432 - L1M4c LINE L1 -6293 249 86 2265 105 3 3 chr5 60100100 60100404 -142985128 - AluSc SINE Alu -5 304 1 321 276 51 86 chr5 60100404 60100487 -142985045 - L1M4c LINE L1 -6456 86 2 201 291 110 39 chr5 60100702 60100829 -142984703 + MIR SINE MIR 97 232 -30 751 87 10 0 chr5 60101048 60101152 -142984380 + L1MA1 LINE L1 6198 6302 0 1141 211 60 131 chr5 60101177 60101526 -142984006 + L1ME4a LINE L1 5468 5840 -281 4098 161 8 68 chr5 60101526 60101695 -142983837 - MER50 LTR ERV1 0 734 556 2455 87 0 0 chr5 60101695 60102005 -142983527 + AluY SINE Alu 1 310 -1 4098 161 8 68 chr5 60102005 60102391 -142983141 - MER50 LTR ERV1 -178 556 237 2092 105 51 0 chr5 60102391 60102685 -142982847 - AluSg SINE Alu -1 309 1 4098 161 8 68 chr5 60102685 60102909 -142982623 - MER50 LTR ERV1 -497 237 1 1141 211 60 131 chr5 60102909 60103260 -142982272 + L1ME4a LINE L1 5840 6118 -3 261 316 57 45 chr5 60104192 60104369 -142981163 - L1ME3A LINE L1 0 6170 5992 540 225 35 21 chr5 60104523 60104665 -142980867 - L1ME3A LINE L1 -244 5926 5783 775 253 27 24 chr5 60104671 60105050 -142980482 - L1ME3A LINE L1 -726 5438 5055 1012 241 106 93 chr5 60105055 60105124 -142980408 - L3 LINE CR1 -575 1002 935 1667 146 61 8 chr5 60105124 60105385 -142980147 - AluJo SINE Alu -27 285 11 1012 241 106 93 chr5 60105385 60105936 -142979596 - L3 LINE CR1 -642 935 374 3107 101 24 5 chr5 60105951 60106377 -142979155 - MER61C LTR ERV1 0 434 1 219 36 0 0 chr5 60106917 60106945 -142978587 + (CTTG)n Simple_repeat Simple_repeat 2 29 0 2244 106 7 3 chr5 60106945 60107248 -142978284 - AluSp SINE Alu -9 304 1 243 236 198 19 chr5 60107633 60107739 -142977793 + L2 LINE L2 3182 3306 -7 388 337 62 17 chr5 60107817 60107995 -142977537 - MIR SINE MIR -50 212 27 2070 87 39 48 chr5 60108132 60108279 -142977253 + AluSx SINE Alu 1 148 -164 2417 68 10 0 chr5 60108279 60108575 -142976957 + AluY SINE Alu 1 299 -12 2070 87 39 48 chr5 60108575 60108736 -142976796 + AluSx SINE Alu 148 306 -6 215 305 73 0 chr5 60109910 60109992 -142975540 - MIR3 SINE MIR -23 185 98 21 36 0 0 chr5 60110503 60110531 -142975001 + AT_rich Low_complexity Low_complexity 1 28 0 514 174 22 101 chr5 60111000 60111038 -142974494 + L1MEc LINE L1 1977 2016 -4380 2035 134 0 0 chr5 60111038 60111344 -142974188 - AluSx SINE Alu 0 306 1 514 174 22 101 chr5 60111344 60111442 -142974090 + L1MEc LINE L1 2016 2103 -4293 293 231 159 155 chr5 60111520 60111771 -142973761 + MIR SINE MIR 3 254 -8 344 276 38 0 chr5 60111808 60111913 -142973619 - MIR SINE MIR -74 188 80 240 271 0 29 chr5 60111925 60111984 -142973548 + L2 LINE L2 3205 3263 -9 2575 152 63 43 chr5 60111984 60112438 -142973094 - MLT1D LTR MaLR 0 505 39 2538 77 0 0 chr5 60112438 60112749 -142972783 - AluY SINE Alu 0 311 1 2575 152 63 43 chr5 60112749 60112787 -142972745 - MLT1D LTR MaLR -466 39 3 242 267 145 61 chr5 60113863 60113994 -142971538 + MIR SINE MIR 51 192 -70 1189 138 0 0 chr5 60114484 60114651 -142970881 - AluJb SINE Alu -10 302 136 2118 90 14 10 chr5 60115403 60115691 -142969841 - AluSx SINE Alu -23 289 1 234 255 47 9 chr5 60117120 60117292 -142968240 + (CATTC)n Simple_repeat Simple_repeat 1 178 0 532 191 6 33 chr5 60117306 60117489 -142968043 + C-rich Low_complexity Low_complexity 1 178 0 1665 166 6 101 chr5 60117498 60117824 -142967708 - AluJo SINE Alu -7 295 1 333 278 22 56 chr5 60118311 60118491 -142967041 + GA-rich Low_complexity Low_complexity 6 179 0 556 158 68 45 chr5 60119067 60119200 -142966332 + L1MB7 LINE L1 6049 6184 0 80 81 0 0 chr5 60119205 60119390 -142966142 + AT_rich Low_complexity Low_complexity 1 185 0 2056 125 16 7 chr5 60119419 60119724 -142965808 + AluSx SINE Alu 1 308 -4 286 349 41 41 chr5 60119724 60119862 -142965670 + L3 LINE CR1 1408 1548 -29 377 271 14 95 chr5 60121424 60121645 -142963887 + L2 LINE L2 3102 3304 -9 775 237 39 29 chr5 60122027 60122234 -142963298 + MIR SINE MIR 4 212 -50 2258 91 3 0 chr5 60122246 60122589 -142962943 - AluSp SINE Alu 0 344 1 982 262 0 31 chr5 60122759 60122984 -142962548 + MER58A DNA MER1_type 1 218 -6 1867 134 10 46 chr5 60123024 60123329 -142962203 + AluJb SINE Alu 7 300 -12 304 327 67 0 chr5 60123432 60123597 -142961935 - MIR SINE MIR 0 262 87 1282 188 186 50 chr5 60124483 60124882 -142960650 - MLT1C LTR MaLR -14 453 1 2273 118 0 16 chr5 60125588 60125903 -142959629 + AluSx SINE Alu 1 310 -2 867 120 0 35 chr5 60127416 60127558 -142957974 - FRAM SINE Alu 0 176 40 212 301 48 39 chr5 60127840 60127943 -142957589 - MIR3 SINE MIR -7 201 98 546 224 9 0 chr5 60128287 60128394 -142957138 - MIR3 SINE MIR -16 192 85 22 0 0 0 chr5 60128483 60128505 -142957027 + AT_rich Low_complexity Low_complexity 1 22 0 197 294 185 0 chr5 60129185 60129277 -142956255 + MIR SINE MIR 84 192 -70 4225 158 28 64 chr5 60129558 60130382 -142955150 - L1MB5 LINE L1 -13 6161 5384 2377 91 3 0 chr5 60130382 60130678 -142954854 - AluSp SINE Alu -16 297 1 4225 158 28 64 chr5 60130678 60131060 -142954472 - L1MB5 LINE L1 -790 5384 4990 2391 116 30 25 chr5 60131718 60132080 -142953452 - THE1B LTR MaLR 0 364 1 470 284 218 6 chr5 60132831 60133188 -142952344 + L2 LINE L2 2636 3073 -240 2177 110 3 0 chr5 60133191 60133483 -142952049 + AluSx SINE Alu 3 295 -17 1173 99 12 6 chr5 60133487 60133648 -142951884 + FRAM SINE Alu 1 154 -22 198 176 0 0 chr5 60133664 60133698 -142951834 + L2 LINE L2 3277 3310 -3 1685 134 0 4 chr5 60133753 60133999 -142951533 - AluSg/x SINE Alu 0 310 66 727 149 16 0 chr5 60135022 60135143 -142950389 - MER5A DNA MER1_type -66 123 1 285 244 77 0 chr5 60136522 60136600 -142948932 - L2 LINE L2 -18 3254 3171 1807 182 3 7 chr5 60136772 60137068 -142948464 + AluJb SINE Alu 1 295 -17 27 29 0 0 chr5 60137068 60137102 -142948430 + AT_rich Low_complexity Low_complexity 1 34 0 1133 208 95 0 chr5 60141019 60141313 -142944219 + MER58B DNA MER1_type 19 340 -1 1121 165 31 54 chr5 60141528 60141752 -142943780 + MER20 DNA MER1_type 1 219 0 233 196 62 31 chr5 60143403 60143500 -142942032 + (CTATA)n Simple_repeat Simple_repeat 3 102 0 2111 123 0 0 chr5 60143524 60143809 -142941723 + AluSx SINE Alu 1 285 -27 251 122 49 0 chr5 60144445 60144486 -142941046 + MER57A LTR ERV1 295 337 -66 1064 213 87 11 chr5 60145422 60145699 -142939833 - MLT1D LTR MaLR -3 502 205 1578 171 31 27 chr5 60146834 60147126 -142938406 - AluJo SINE Alu -18 294 2 2224 108 38 59 chr5 60147490 60147698 -142937834 - THE1B LTR MaLR 0 364 166 2449 90 3 0 chr5 60147698 60148009 -142937523 + AluSp SINE Alu 1 312 -1 2224 108 38 59 chr5 60148009 60148172 -142937360 - THE1B LTR MaLR -198 166 1 510 304 46 45 chr5 60148723 60149129 -142936403 - LTR16A1 LTR ERVL -3 454 73 2564 64 3 10 chr5 60149318 60149632 -142935900 - AluSp SINE Alu -1 312 1 418 303 52 0 chr5 60149653 60149808 -142935724 + MIR SINE MIR 4 166 -96 190 80 0 0 chr5 60149871 60149896 -142935636 + MIR SINE MIR 216 240 -22 233 206 164 0 chr5 60150853 60150926 -142934606 + MER96 DNA MER1_type? 1 85 -90 1506 203 0 14 chr5 60151209 60151495 -142934037 + AluJo SINE Alu 6 287 -25 2230 119 0 3 chr5 60152081 60152392 -142933140 - AluSx SINE Alu -2 310 1 264 306 20 10 chr5 60153255 60153353 -142932179 + MIR3 SINE MIR 109 207 -1 1019 184 14 24 chr5 60153397 60153604 -142931928 + AluJo SINE Alu 6 210 -102 23 33 0 0 chr5 60153766 60153796 -142931736 + AT_rich Low_complexity Low_complexity 1 30 0 199 312 25 106 chr5 60153961 60154198 -142931334 - L2 LINE L2 -223 3049 2832 289 292 212 0 chr5 60154853 60154990 -142930542 + MIR SINE MIR 20 185 -77 207 0 0 0 chr5 60157016 60157039 -142928493 + (T)n Simple_repeat Simple_repeat 1 23 0 22 0 7 0 chr5 60160661 60160714 -142924818 + AT_rich Low_complexity Low_complexity 1 22 0 240 163 0 0 chr5 60160797 60160840 -142924692 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 277 284 0 0 chr5 60163865 60163932 -142921600 + L1ME1 LINE L1 26 92 -5978 2346 207 165 49 chr5 60164016 60164474 -142921058 + L1ME1 LINE L1 3398 3801 -2279 2235 96 0 26 chr5 60164474 60164777 -142920755 + AluSq SINE Alu 1 295 -18 2346 207 165 49 chr5 60164777 60165305 -142920227 + L1ME1 LINE L1 3801 4499 -1581 21 36 0 0 chr5 60165718 60165746 -142919786 + AT_rich Low_complexity Low_complexity 1 28 0 3537 207 85 19 chr5 60165775 60166335 -142919197 + L1ME1 LINE L1 4501 5023 -1077 1890 116 39 11 chr5 60166335 60166619 -142918913 - AluSg SINE Alu -2 308 17 3537 207 85 19 chr5 60166619 60167220 -142918312 + L1ME1 LINE L1 5023 5583 -517 2085 136 3 3 chr5 60167220 60167515 -142918017 + AluSx SINE Alu 1 295 -17 3537 207 85 19 chr5 60167515 60167618 -142917914 + L1ME1 LINE L1 5583 5678 -422 2079 100 28 3 chr5 60167618 60167908 -142917624 + AluSq SINE Alu 9 305 -8 3537 207 85 19 chr5 60167908 60168140 -142917392 + L1ME1 LINE L1 5678 6095 -5 225 0 0 0 chr5 60168279 60168304 -142917228 + (A)n Simple_repeat Simple_repeat 1 25 0 396 215 0 0 chr5 60169224 60169331 -142916201 + (TA)n Simple_repeat Simple_repeat 1 107 0 272 280 152 8 chr5 60169739 60169864 -142915668 + L1ME4a LINE L1 5956 6098 -23 1798 150 30 23 chr5 60169881 60170181 -142915351 + AluJo SINE Alu 1 302 -10 23 54 0 0 chr5 60170269 60170306 -142915226 + AT_rich Low_complexity Low_complexity 1 37 0 2372 83 6 10 chr5 60170941 60171254 -142914278 + AluSx SINE Alu 1 312 0 1565 159 120 18 chr5 60171387 60171670 -142913862 + AluJb SINE Alu 1 312 0 2336 102 3 0 chr5 60173466 60173770 -142911762 + AluSx SINE Alu 1 305 -7 2179 100 14 0 chr5 60174085 60174364 -142911168 - AluSp SINE Alu -22 291 9 347 78 20 0 chr5 60174319 60174370 -142911162 - Alu SINE Alu -255 53 2 1540 201 7 0 chr5 60174401 60174670 -142910862 + AluJo SINE Alu 9 279 -33 240 333 19 19 chr5 60175071 60175176 -142910356 + MIR SINE MIR 42 146 -62 384 281 0 21 chr5 60175295 60175391 -142910141 - MIR SINE MIR -111 151 58 1908 137 46 0 chr5 60175863 60176148 -142909384 + AluSx SINE Alu 2 299 -13 776 135 32 8 chr5 60176425 60176551 -142908981 + FLAM_C SINE Alu 2 130 -3 34 0 0 0 chr5 60176553 60176587 -142908945 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr5 60176925 60176954 -142908578 + AT_rich Low_complexity Low_complexity 1 29 0 2296 99 0 0 chr5 60177564 60177858 -142907674 + AluSc SINE Alu 1 294 -15 42 86 0 0 chr5 60178463 60178568 -142906964 + AT_rich Low_complexity Low_complexity 1 105 0 720 213 60 0 chr5 60178801 60178951 -142906581 - FRAM SINE Alu -20 156 1 1840 175 0 3 chr5 60179242 60179545 -142905987 + AluJb SINE Alu 1 302 -10 21 0 0 0 chr5 60179710 60179731 -142905801 + AT_rich Low_complexity Low_complexity 1 21 0 2454 75 0 0 chr5 60180576 60180870 -142904662 - AluSg SINE Alu -16 294 1 1865 153 3 14 chr5 60181322 60181617 -142903915 - AluSx SINE Alu -20 292 1 847 87 0 63 chr5 60181626 60181752 -142903780 - AluSg/x SINE Alu -21 289 172 889 260 144 30 chr5 60181916 60182162 -142903370 - LTR33 LTR ERVL -2 519 302 2324 111 0 0 chr5 60182162 60182460 -142903072 + AluSq SINE Alu 1 298 -15 889 260 144 30 chr5 60182460 60182679 -142902853 - LTR33 LTR ERVL -219 302 1 804 207 84 38 chr5 60183203 60183416 -142902116 - MER58A DNA MER1_type 0 224 2 1347 161 132 26 chr5 60183519 60183792 -142901740 + AluJo SINE Alu 1 302 -10 25 112 0 0 chr5 60184654 60184770 -142900762 + AT_rich Low_complexity Low_complexity 1 116 0 238 150 183 0 chr5 60185434 60185494 -142900038 - L1ME2 LINE L1 -142 6022 5952 23 54 0 0 chr5 60185504 60185541 -142899991 + AT_rich Low_complexity Low_complexity 1 37 0 312 234 73 88 chr5 60185546 60185751 -142899781 + HAL1 LINE L1 2302 2503 -4 688 275 72 37 chr5 60185756 60186389 -142899143 + L1MC5 LINE L1 6198 6815 -993 538 94 79 3 chr5 60186391 60186519 -142899013 + AluSp/q SINE Alu 132 301 -12 796 152 115 37 chr5 60186549 60186792 -142898740 + L1MC5 LINE L1 6876 7137 -824 1035 204 43 43 chr5 60186884 60187207 -142898325 + L1ME2 LINE L1 5841 6163 -1 271 202 67 119 chr5 60187286 60187479 -142898053 + L1MC4 LINE L1 7833 8015 -27 867 214 170 51 chr5 60187595 60187717 -142897815 + L1MC5 LINE L1 7253 7359 -602 2254 104 10 7 chr5 60187717 60188026 -142897506 + AluSg SINE Alu 1 310 0 867 214 170 51 chr5 60188026 60188474 -142897058 + L1MC5 LINE L1 7359 7891 -70 2015 143 3 3 chr5 60188474 60188782 -142896750 - AluSx SINE Alu -2 310 3 231 62 0 0 chr5 60188782 60188814 -142896718 - Alu SINE Alu -268 32 1 21 71 0 0 chr5 60188845 60188887 -142896645 + AT_rich Low_complexity Low_complexity 1 42 0 2141 97 28 3 chr5 60189598 60189887 -142895645 + AluSx SINE Alu 1 296 -16 1468 187 42 8 chr5 60191091 60191353 -142894179 + AluJo SINE Alu 3 273 -39 1303 143 25 0 chr5 60191393 60191624 -142893908 + AluSg/x SINE Alu 84 319 0 261 304 98 79 chr5 60191667 60191983 -142893549 + L2 LINE L2 2203 2524 -790 192 359 111 0 chr5 60192053 60192170 -142893362 + L2 LINE L2 2648 2777 -537 1016 99 0 86 chr5 60192306 60192468 -142893064 + AluJb SINE Alu 84 231 -81 2399 76 0 0 chr5 60192916 60193206 -142892326 + AluY SINE Alu 1 290 -21 278 329 120 6 chr5 60193236 60193394 -142892138 + L3 LINE CR1 330 505 -1072 2356 122 0 0 chr5 60193408 60193720 -142891812 + AluSx SINE Alu 1 312 0 848 256 118 75 chr5 60193904 60194463 -142891069 + MLT1G1 LTR MaLR 7 589 -6 979 322 103 7 chr5 60194469 60194888 -142890644 + L3 LINE CR1 628 1086 -491 193 343 14 0 chr5 60194941 60195011 -142890521 - MIR SINE MIR -3 259 189 864 196 0 12 chr5 60195011 60195174 -142890358 - AluSg/x SINE Alu -14 296 136 2179 122 0 3 chr5 60195175 60195470 -142890062 - AluSx SINE Alu -18 294 1 671 183 51 7 chr5 60195472 60195609 -142889923 - MIR SINE MIR -62 200 58 420 71 0 0 chr5 60195618 60195674 -142889858 + (CA)n Simple_repeat Simple_repeat 1 56 0 1214 178 111 41 chr5 60195680 60195813 -142889719 - AluJo SINE Alu -23 289 167 2383 119 82 22 chr5 60195813 60196216 -142889316 + MSTA LTR MaLR 1 427 -1 1214 178 111 41 chr5 60196216 60196352 -142889180 - AluJo SINE Alu -145 167 1 245 331 56 7 chr5 60196396 60196538 -142888994 + L3 LINE CR1 1134 1282 -295 31 0 0 0 chr5 60196824 60196855 -142888677 + AT_rich Low_complexity Low_complexity 1 31 0 1425 207 47 44 chr5 60197374 60197945 -142887587 + L1ME1 LINE L1 5256 5927 -239 824 109 8 8 chr5 60197945 60198064 -142887468 - FLAM_C SINE Alu -11 132 14 577 230 50 0 chr5 60198067 60198228 -142887304 + L1ME1 LINE L1 5924 6092 -74 2029 115 0 0 chr5 60198228 60198506 -142887026 + AluSx SINE Alu 1 278 -34 237 33 0 0 chr5 60198506 60198536 -142886996 + (CA)n Simple_repeat Simple_repeat 2 31 0 975 182 0 6 chr5 60198536 60198695 -142886837 + AluSg/x SINE Alu 135 292 -18 1511 215 97 34 chr5 60198730 60199130 -142886402 - LTR40a LTR ERVL -7 512 78 2210 98 3 0 chr5 60199130 60199417 -142886115 + AluSg SINE Alu 1 288 -22 1511 215 97 34 chr5 60199417 60199482 -142886050 - LTR40a LTR ERVL -441 78 18 604 237 103 0 chr5 60199569 60199793 -142885739 + L1ME3 LINE L1 5645 5891 -271 695 183 0 8 chr5 60199794 60199920 -142885612 + FLAM_C SINE Alu 1 125 -18 490 223 214 18 chr5 60199928 60200152 -142885380 + L1ME3 LINE L1 5875 6142 -20 624 233 147 38 chr5 60200415 60200729 -142884803 + L1MC4a LINE L1 5576 5923 -1885 26 0 0 0 chr5 60200917 60200943 -142884589 + AT_rich Low_complexity Low_complexity 1 26 0 2271 98 0 0 chr5 60200952 60201257 -142884275 + AluSx SINE Alu 1 305 -7 729 125 42 0 chr5 60201272 60201392 -142884140 + L1PA16 LINE L1 6033 6157 -9 849 160 6 39 chr5 60201558 60201714 -142883818 - AluJo SINE Alu -161 151 1 2330 104 0 0 chr5 60202047 60202346 -142883186 + AluSg SINE Alu 1 299 -11 28 0 0 0 chr5 60202402 60202430 -142883102 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 60203164 60203200 -142882332 + AT_rich Low_complexity Low_complexity 1 36 0 319 361 75 17 chr5 60203309 60203500 -142882032 - MIR SINE MIR -3 205 1 1626 179 53 3 chr5 60203685 60203970 -142881562 - AluJb SINE Alu -13 299 1 29 0 0 0 chr5 60204328 60204357 -142881175 + AT_rich Low_complexity Low_complexity 1 29 0 341 196 54 93 chr5 60204399 60204603 -142880929 - L1ME4a LINE L1 -90 6100 5905 274 207 17 0 chr5 60204612 60204670 -142880862 + L2 LINE L2 3005 3063 -250 1102 237 5 0 chr5 60204731 60204950 -142880582 - MER58A DNA MER1_type -4 220 1 865 178 132 121 chr5 60204989 60205343 -142880189 + MLT1C LTR MaLR 1 358 -32 643 174 204 36 chr5 60205343 60205539 -142879993 + MER46A DNA MER2_type 1 229 -7 1201 239 117 14 chr5 60205659 60205922 -142879610 - L1ME4a LINE L1 -782 5433 5198 2015 130 6 22 chr5 60205922 60206237 -142879295 + AluSx SINE Alu 1 310 -2 1201 239 117 14 chr5 60206237 60206462 -142879070 - L1ME4a LINE L1 -1017 5198 4895 648 246 46 0 chr5 60206479 60206654 -142878878 - MER58A DNA MER1_type -3 221 39 311 218 46 0 chr5 60206664 60206751 -142878781 - L1ME4a LINE L1 -1328 4887 4797 * 1682 219 111 13 chr5 60206739 60207581 -142877951 - L1MEc LINE L1 -3426 2789 1893 1630 178 4 4 chr5 60207583 60207847 -142877685 + AluJb SINE Alu 11 274 -38 566 197 0 8 chr5 60207853 60207970 -142877562 - L1MEc LINE L1 -4582 1814 1699 279 247 35 0 chr5 60208082 60208167 -142877365 + L1M4 LINE L1 3860 3947 -2199 611 246 72 64 chr5 60208254 60208490 -142877042 + MIR SINE MIR 25 262 0 2281 120 0 0 chr5 60208541 60208850 -142876682 + AluSg SINE Alu 1 309 -1 2257 95 3 0 chr5 60209180 60209474 -142876058 + AluSp SINE Alu 6 300 -13 1726 150 0 91 chr5 60209519 60209860 -142875672 + AluJo SINE Alu 1 310 -2 243 305 75 0 chr5 60209869 60210056 -142875476 + L1M4 LINE L1 4747 4947 -1199 4197 48 10 4 chr5 60211437 60211959 -142873573 - L1PA5 LINE L1 -2 6152 5628 799 249 75 46 chr5 60213032 60213273 -142872259 + MIR SINE MIR 2 249 -13 198 0 0 0 chr5 60214739 60214761 -142870771 + (A)n Simple_repeat Simple_repeat 1 22 0 323 288 121 88 chr5 60215394 60215824 -142869708 + L1M2 LINE L1 506 949 -5900 27 62 0 0 chr5 60216888 60216936 -142868596 + AT_rich Low_complexity Low_complexity 1 48 0 1344 197 21 11 chr5 60216957 60217236 -142868296 - AluJo SINE Alu -14 298 17 836 257 140 0 chr5 60217260 60217482 -142868050 + MIR SINE MIR 9 261 -1 2221 108 30 0 chr5 60217995 60218291 -142867241 + AluSx SINE Alu 1 305 -7 408 346 19 14 chr5 60218546 60218754 -142866778 + L2 LINE L2 678 886 -2428 1692 100 22 4 chr5 60218895 60219126 -142866406 - AluSq SINE Alu -19 294 60 447 234 65 32 chr5 60219802 60219908 -142865624 - L1ME3A LINE L1 -14 6156 6055 2131 105 0 69 chr5 60219908 60220241 -142865291 + AluSg SINE Alu 1 310 0 2201 111 0 23 chr5 60220246 60220552 -142864980 + AluSc SINE Alu 3 301 -8 447 234 65 32 chr5 60220552 60220593 -142864939 - L1ME3A LINE L1 -118 6052 5998 4224 38 57 0 chr5 60220630 60221157 -142864375 - LTR6B LTR ERV1 -1 557 1 620 147 0 0 chr5 60221212 60221314 -142864218 - U13 snRNA snRNA -2 102 1 413 86 143 0 chr5 60221336 60221406 -142864126 + MADE1 DNA Mariner 1 80 0 2541 63 0 3 chr5 60221478 60221780 -142863752 + AluY SINE Alu 1 301 -10 1602 178 96 50 chr5 60222576 60222837 -142862695 + MLT1E LTR MaLR 1 249 -344 2345 108 0 0 chr5 60222837 60223144 -142862388 + AluSg1 SINE Alu 1 307 -2 1602 178 96 50 chr5 60223144 60223392 -142862140 + MLT1E LTR MaLR 249 593 0 241 239 233 31 chr5 60223569 60223732 -142861800 - L2 LINE L2 0 3313 3118 1047 232 99 36 chr5 60223838 60224308 -142861224 + MLT1H1 LTR MaLR 1 555 0 2290 107 0 3 chr5 60224747 60225057 -142860475 + AluSc SINE Alu 1 309 0 337 319 50 35 chr5 60225226 60225477 -142860055 - L2 LINE L2 -188 3084 2818 363 141 0 0 chr5 60225820 60225884 -142859648 + (TCCCC)n Simple_repeat Simple_repeat 1 64 0 1558 152 0 4 chr5 60225884 60226114 -142859418 - AluJo SINE Alu -16 296 68 31 0 0 0 chr5 60227870 60227901 -142857631 + AT_rich Low_complexity Low_complexity 1 31 0 325 34 76 42 chr5 60227908 60228026 -142857506 + (TA)n Simple_repeat Simple_repeat 1 122 0 36 23 0 0 chr5 60228026 60228069 -142857463 + AT_rich Low_complexity Low_complexity 1 43 0 203 89 71 0 chr5 60228072 60228128 -142857404 + (TA)n Simple_repeat Simple_repeat 1 60 0 1528 157 20 24 chr5 60228150 60228399 -142857133 - AluJo SINE Alu -64 248 1 438 299 42 7 chr5 60229611 60229755 -142855777 + MIR SINE MIR 63 211 -51 22 0 0 0 chr5 60229763 60229785 -142855747 + AT_rich Low_complexity Low_complexity 1 22 0 201 171 0 0 chr5 60229789 60229824 -142855708 + (TTA)n Simple_repeat Simple_repeat 1 35 0 2255 97 3 7 chr5 60229930 60230229 -142855303 - AluSp SINE Alu -15 298 1 414 0 0 0 chr5 60230243 60230289 -142855243 + (CA)n Simple_repeat Simple_repeat 2 47 0 2073 124 48 0 chr5 60230391 60230681 -142854851 + AluSx SINE Alu 3 306 -6 550 240 117 25 chr5 60230962 60231158 -142854374 - MIR SINE MIR 0 262 49 2317 88 0 7 chr5 60231519 60231814 -142853718 + AluSq SINE Alu 1 293 -20 366 309 30 62 chr5 60232138 60232381 -142853151 + MIR SINE MIR 9 241 -21 798 255 50 42 chr5 60232695 60232954 -142852578 - MIR SINE MIR 0 262 2 2451 74 0 0 chr5 60233283 60233579 -142851953 - AluY SINE Alu -15 296 1 197 348 29 0 chr5 60233722 60233791 -142851741 - L2 LINE L2 -1 3271 3201 1271 107 0 0 chr5 60233897 60234065 -142851467 + THE1B LTR MaLR 1 168 -196 6276 42 7 11 chr5 60234071 60234811 -142850721 - SVA Other Other 0 1386 650 1008 66 5 66 chr5 60235113 60235309 -142850223 - SVA Other Other -925 461 278 2491 51 3 22 chr5 60235523 60235838 -142849694 + AluY SINE Alu 3 311 0 372 305 130 31 chr5 60236279 60236502 -142849030 + MIR SINE MIR 18 262 0 353 250 140 0 chr5 60236512 60236612 -142848920 + MIR SINE MIR 6 119 -143 2238 105 10 3 chr5 60236677 60236983 -142848549 - AluSq SINE Alu -4 309 2 935 175 62 98 chr5 60236994 60237211 -142848321 - LTR56 LTR ERV1 -120 325 123 2567 41 0 0 chr5 60237211 60237501 -142848031 + AluY SINE Alu 1 290 -21 935 175 62 98 chr5 60237501 60237620 -142847912 - LTR56 LTR ERV1 -322 123 1 977 224 56 16 chr5 60237634 60237884 -142847648 - MER115 DNA AcHobo -35 658 399 2199 94 4 0 chr5 60238029 60238333 -142847199 + AluSc SINE Alu 1 305 0 1704 206 8 37 chr5 60238366 60238744 -142846788 + MLT1A2 LTR MaLR 1 367 -7 300 295 116 8 chr5 60238759 60238888 -142846644 - MER115 DNA AcHobo -548 145 3 186 255 234 0 chr5 60239009 60239103 -142846429 - MIR3 SINE MIR -11 197 82 939 87 0 0 chr5 60239335 60239450 -142846082 + AluSg SINE Alu 1 115 -195 2495 72 13 0 chr5 60239450 60239757 -142845775 + AluY SINE Alu 1 311 0 6056 97 13 17 chr5 60239757 60240163 -142845369 + L1MA4A LINE L1 5385 5791 -512 840 71 0 0 chr5 60240163 60240275 -142845257 + (TA)n Simple_repeat Simple_repeat 1 112 0 6056 97 13 17 chr5 60240275 60240765 -142844767 + L1MA4A LINE L1 5791 6278 -25 2119 130 0 3 chr5 60240846 60241146 -142844386 + AluSx SINE Alu 1 299 -13 886 100 17 8 chr5 60241369 60241489 -142844043 - AluSq/x SINE Alu -192 121 1 1855 170 0 0 chr5 60241492 60241774 -142843758 - AluJb SINE Alu -20 292 11 400 219 159 33 chr5 60241810 60241961 -142843571 - L1ME LINE L1 -451 5670 5501 578 278 23 23 chr5 60242000 60242176 -142843356 + MIR SINE MIR 29 204 -58 317 287 40 15 chr5 60242222 60242424 -142843108 - L1P5 LINE L1 -695 5461 5255 2343 87 0 19 chr5 60242552 60242862 -142842670 - AluY SINE Alu -7 304 1 701 167 28 49 chr5 60242918 60243062 -142842470 - FLAM_C SINE Alu -1 142 2 185 169 17 0 chr5 60243190 60243249 -142842283 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 43 56 0 0 chr5 60243271 60243342 -142842190 + AT_rich Low_complexity Low_complexity 1 71 0 2127 104 7 19 chr5 60243432 60243740 -142841792 - AluY SINE Alu -7 304 1 1251 175 0 0 chr5 60243825 60244025 -142841507 - AluJo SINE Alu -12 300 101 4229 156 42 47 chr5 60244025 60244991 -142840541 + pTR5 LTR ERV1 744 2025 -413 352 214 31 20 chr5 60244991 60245089 -142840443 + LTR30 LTR ERV1 544 642 -80 1569 95 5 5 chr5 60245091 60245313 -142840219 + pTR5 LTR ERV1 171 392 -2046 636 147 29 0 chr5 60245313 60245415 -142840117 - AluJo SINE Alu -207 105 1 222 37 0 0 chr5 60245431 60245458 -142840074 + (TA)n Simple_repeat Simple_repeat 2 28 0 2333 54 3 63 chr5 60245458 60245773 -142839759 - AluSp SINE Alu -15 298 3 307 317 92 58 chr5 60245801 60246183 -142839349 - L1 LINE L1 -1602 4544 4150 530 278 170 4 chr5 60246709 60246950 -142838582 + L2 LINE L2 2560 2840 -474 293 0 27 0 chr5 60246952 60246989 -142838543 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 10514 39 40 25 chr5 60246989 60248326 -142837206 - SVA Other Other -23 1363 8 717 145 0 24 chr5 60248339 60248463 -142837069 - AluSg/x SINE Alu -13 296 176 603 320 168 5 chr5 60248466 60248853 -142836679 + L2 LINE L2 2846 3295 -18 812 233 12 0 chr5 60249159 60249322 -142836210 - MER45A DNA AcHobo -1 177 13 1804 159 0 27 chr5 60249744 60250039 -142835493 - AluJb SINE Alu -23 289 3 734 127 72 149 chr5 60250073 60250214 -142835318 + MER3 DNA MER1_type 6 126 -83 2400 82 0 0 chr5 60250214 60250505 -142835027 + AluSg SINE Alu 1 291 -19 734 127 72 149 chr5 60250505 60250584 -142834948 + MER3 DNA MER1_type 126 209 0 323 292 39 31 chr5 60250738 60250868 -142834664 - MER117 DNA MER1_type -31 166 36 192 193 123 18 chr5 60250873 60250930 -142834602 - MIR SINE MIR 0 262 200 239 358 73 18 chr5 60251546 60251711 -142833821 - L2 LINE L2 -209 3063 2890 350 298 0 11 chr5 60251890 60251984 -142833548 + MIR3 SINE MIR 67 159 -49 1449 58 0 0 chr5 60252200 60252374 -142833158 - AluY SINE Alu -7 304 131 461 253 89 0 chr5 60252954 60253100 -142832432 - L2 LINE L2 -9 3304 3146 1727 143 50 18 chr5 60253282 60253561 -142831971 - AluJo SINE Alu -24 288 1 2364 80 3 7 chr5 60253972 60254271 -142831261 - AluSc SINE Alu -11 298 1 1058 197 86 120 chr5 60254350 60254816 -142830716 - MLT1J2 LTR MaLR 0 450 1 2278 106 3 0 chr5 60254906 60255199 -142830333 - AluSc SINE Alu -15 294 1 3573 122 41 35 chr5 60255376 60255800 -142829732 + LTR38B LTR ERV1 1 432 -178 2291 106 0 3 chr5 60255800 60256103 -142829429 - AluSx SINE Alu -9 303 2 3573 122 41 35 chr5 60256103 60256284 -142829248 + LTR38B LTR ERV1 432 610 0 2232 196 110 90 chr5 60256319 60257127 -142828405 + LTR1B LTR ERV1 3 826 0 25 31 0 0 chr5 60257448 60257480 -142828052 + AT_rich Low_complexity Low_complexity 1 32 0 2212 126 0 3 chr5 60257564 60257874 -142827658 - AluSg SINE Alu -1 309 1 2421 90 0 0 chr5 60257882 60258183 -142827349 - AluY SINE Alu -10 301 1 1429 166 106 67 chr5 60258417 60258658 -142826874 + MER2 DNA MER2_type 1 260 -84 2382 79 7 0 chr5 60258658 60258950 -142826582 - AluSg1 SINE Alu -14 295 2 1429 166 106 67 chr5 60258950 60259039 -142826493 + MER2 DNA MER2_type 260 344 0 396 55 0 0 chr5 60261572 60261627 -142823905 + (TAA)n Simple_repeat Simple_repeat 1 55 0 23 33 0 0 chr5 60263172 60263202 -142822330 + AT_rich Low_complexity Low_complexity 1 30 0 240 205 139 72 chr5 60263579 60263745 -142821787 - Charlie7 DNA MER1_type -75 2537 2361 2110 127 6 16 chr5 60263810 60264124 -142821408 + AluJo SINE Alu 1 311 -1 293 250 0 23 chr5 60264129 60264217 -142821315 - Charlie7 DNA MER1_type -484 2128 2043 2105 117 10 10 chr5 60264333 60264632 -142820900 + AluSx SINE Alu 1 299 -13 347 0 0 23 chr5 60264800 60264844 -142820688 + (CA)n Simple_repeat Simple_repeat 2 44 0 1331 174 71 44 chr5 60264942 60265236 -142820296 + AluJo SINE Alu 1 302 -10 24 67 0 0 chr5 60265470 60265515 -142820017 + AT_rich Low_complexity Low_complexity 1 45 0 1485 196 93 45 chr5 60265729 60266172 -142819360 - Charlie7 DNA MER1_type -619 1993 1530 251 258 91 105 chr5 60266219 60266303 -142819229 - L1ME3A LINE L1 0 6170 6086 1564 178 20 46 chr5 60266303 60266607 -142818925 + AluJo SINE Alu 11 306 -6 251 258 91 105 chr5 60266607 60266731 -142818801 - L1ME3A LINE L1 -84 6086 5965 748 139 16 8 chr5 60268076 60268205 -142817327 - MSTC LTR MaLR 0 428 299 17283 28 0 0 chr5 60268402 60271215 -142814317 + L1PA3 LINE L1 3334 6153 -2 3078 43 13 0 chr5 60271215 60271585 -142813947 + L1PA5 LINE L1 5773 6151 -3 1544 234 47 92 chr5 60271945 60272718 -142812814 + LTR49-int LTR ERV1 3323 4060 -876 284 164 16 16 chr5 60272729 60272790 -142812742 + LTR49-int LTR ERV1 5361 5421 -910 570 246 66 53 chr5 60273055 60273189 -142812343 + LTR37A LTR ERV1 127 267 -159 1214 111 29 98 chr5 60273189 60273433 -142812099 + MER30 DNA MER1_type 4 230 0 570 246 66 53 chr5 60273433 60273542 -142811990 + LTR37A LTR ERV1 267 373 -53 2479 79 0 3 chr5 60273916 60274219 -142811313 + AluY SINE Alu 1 302 -9 762 257 142 58 chr5 60274493 60275119 -142810413 - L1M4 LINE L1 -2309 3837 3159 270 0 0 0 chr5 60275120 60275150 -142810382 + (A)n Simple_repeat Simple_repeat 1 30 0 1422 173 12 24 chr5 60275159 60275407 -142810125 - AluJo SINE Alu -31 281 37 268 257 51 56 chr5 60275558 60275772 -142809760 - L1M4 LINE L1 -3201 2945 2733 24 61 0 0 chr5 60276133 60276166 -142809366 + AT_rich Low_complexity Low_complexity 1 33 0 1435 184 0 57 chr5 60277100 60277416 -142808116 + AluJo SINE Alu 1 298 -14 609 270 168 18 chr5 60278025 60278251 -142807281 + MIR SINE MIR 3 262 0 236 54 54 0 chr5 60278693 60278730 -142806802 + GA-rich Low_complexity Low_complexity 2 40 0 230 296 80 11 chr5 60278732 60278820 -142806712 - MIR SINE MIR -137 125 32 2312 84 0 7 chr5 60278963 60279260 -142806272 - AluSg SINE Alu -15 295 1 37 0 0 0 chr5 60280078 60280115 -142805417 + AT_rich Low_complexity Low_complexity 1 37 0 862 193 0 18 chr5 60280195 60280361 -142805171 - AluSg/x SINE Alu -13 297 135 451 150 0 100 chr5 60280361 60280441 -142805091 - AluJ/FLAM SINE Alu -238 74 3 1072 106 0 0 chr5 60280676 60280817 -142804715 + AluSg/x SINE Alu 85 225 -87 1876 196 3 50 chr5 60280979 60281361 -142804171 + MLT1A1 LTR MaLR 2 365 0 984 175 12 0 chr5 60281435 60281595 -142803937 + FRAM SINE Alu 1 161 -15 801 195 150 35 chr5 60281973 60282173 -142803359 - MER58A DNA MER1_type -1 223 1 867 215 21 37 chr5 60282666 60282857 -142802675 + AluJo SINE Alu 114 301 -11 2361 83 0 16 chr5 60283036 60283349 -142802183 + AluSc SINE Alu 1 308 -1 2133 111 0 20 chr5 60283455 60283753 -142801779 - AluSx SINE Alu -12 300 9 2341 85 0 22 chr5 60283855 60284171 -142801361 - AluSc SINE Alu 0 309 1 2415 83 0 3 chr5 60284264 60284577 -142800955 + AluSx SINE Alu 1 312 0 539 299 20 35 chr5 60284626 60284823 -142800709 + MIR3 SINE MIR 5 198 -10 357 219 0 3 chr5 60284977 60285073 -142800459 + AluJ/FRAM SINE Alu 228 297 -5 1727 136 11 14 chr5 60286363 60286666 -142798866 + AluJo SINE Alu 6 307 0 2175 97 4 0 chr5 60286692 60286991 -142798541 + AluSg SINE Alu 1 300 0 482 283 64 32 chr5 60287077 60287264 -142798268 - MIR SINE MIR -64 198 6 1902 267 92 27 chr5 60287575 60288283 -142797249 + L1M4 LINE L1 61 814 -5728 3649 212 82 26 chr5 60288336 60289537 -142795995 + L1M4 LINE L1 957 2322 -4324 934 195 40 68 chr5 60289531 60289694 -142795838 + L1M4 LINE L1 3014 3180 -3464 * 2174 131 21 46 chr5 60289694 60290067 -142795465 + THE1B LTR MaLR 1 364 0 13023 72 4 12 chr5 60290067 60291528 -142794004 + THE1B-int LTR MaLR 1 1449 -131 2007 141 0 10 chr5 60291528 60291826 -142793706 - AluSx SINE Alu -17 295 1 13023 72 4 12 chr5 60291826 60291953 -142793579 + THE1B-int LTR MaLR 1449 1576 -4 2154 121 18 82 chr5 60291957 60292119 -142793413 + THE1B LTR MaLR 1 172 -192 2392 104 3 0 chr5 60292119 60292427 -142793105 - AluSp SINE Alu -4 309 1 2154 121 18 82 chr5 60292427 60292653 -142792879 + THE1B LTR MaLR 172 364 0 934 195 40 68 chr5 60292653 60292734 -142792798 + L1M4 LINE L1 3182 3257 -3387 1111 182 5 20 chr5 60292742 60292945 -142792587 - AluJb SINE Alu -2 310 111 2138 145 0 0 chr5 60292997 60293301 -142792231 + AluJb SINE Alu 5 308 -4 526 196 0 0 chr5 60293301 60293421 -142792111 + L1M4 LINE L1 3534 3653 -2991 1137 161 14 32 chr5 60293437 60293654 -142791878 + AluJo SINE Alu 87 299 -13 781 250 40 4 chr5 60293656 60293904 -142791628 + L1M4 LINE L1 3654 3910 -2734 1663 291 50 14 chr5 60294151 60294725 -142790807 + L1ME LINE L1 12 606 -5464 1238 207 61 82 chr5 60294977 60295044 -142790488 + L1ME LINE L1 607 674 -5406 2204 104 3 3 chr5 60295044 60295352 -142790180 - AluSq SINE Alu -5 308 1 1238 207 61 82 chr5 60295352 60295882 -142789650 + L1ME LINE L1 674 1191 -4889 1953 131 20 13 chr5 60295901 60296207 -142789325 + AluSx SINE Alu 1 308 -4 2208 123 0 0 chr5 60296296 60296597 -142788935 + AluSx SINE Alu 5 305 -7 22 70 0 0 chr5 60297030 60297073 -142788459 + AT_rich Low_complexity Low_complexity 1 43 0 439 329 26 74 chr5 60297163 60297543 -142787989 - L2 LINE L2 -685 2629 2268 4620 163 86 48 chr5 60298080 60298977 -142786555 - MER21A LTR ERV1 0 931 1 1822 160 0 0 chr5 60298988 60299275 -142786257 - AluJb SINE Alu -13 299 13 581 210 10 0 chr5 60299480 60299580 -142785952 - FLAM_A SINE Alu -41 101 1 1181 212 83 81 chr5 60299583 60299619 -142785913 - L1MC5 LINE L1 -232 7729 7695 1791 156 18 7 chr5 60299619 60299902 -142785630 + AluJb SINE Alu 1 286 -26 1181 212 83 81 chr5 60299902 60300336 -142785196 - L1MC5 LINE L1 -266 7695 7258 2162 189 34 93 chr5 60300490 60301050 -142784482 - MER119 DNA MER1_type -22 561 35 1006 205 40 40 chr5 60301100 60301248 -142784284 - MER58A DNA MER1_type -2196 224 74 1452 171 44 96 chr5 60301248 60301633 -142783899 + MLT1A1 LTR MaLR 1 365 0 1006 205 40 40 chr5 60301633 60301708 -142783824 - MER58A DNA MER1_type -2345 75 1 640 149 44 133 chr5 60301728 60301833 -142783699 - L1MC5 LINE L1 -813 7148 7076 2154 113 0 20 chr5 60301833 60302135 -142783397 - AluSg SINE Alu -12 298 3 640 149 44 133 chr5 60302135 60302277 -142783255 - L1MC5 LINE L1 -885 7076 6923 2837 205 33 16 chr5 60302284 60302440 -142783092 - L1MC3 LINE L1 0 8042 7890 276 30 0 0 chr5 60302440 60302473 -142783059 + (TC)n Simple_repeat Simple_repeat 1 33 0 2837 205 33 16 chr5 60302473 60302956 -142782576 - L1MC3 LINE L1 -152 7890 7405 504 230 84 106 chr5 60302971 60303349 -142782183 + MLT1G LTR MaLR 3 376 -214 23 33 0 0 chr5 60303556 60303586 -142781946 + AT_rich Low_complexity Low_complexity 1 30 0 1057 192 176 46 chr5 60304690 60305013 -142780519 + MLT1A1 LTR MaLR 1 365 0 593 291 54 16 chr5 60305363 60305621 -142779911 + L1ME LINE L1 5477 5744 -377 960 170 65 91 chr5 60306117 60306347 -142779185 + MER58A DNA MER1_type 1 224 0 1231 191 103 8 chr5 60306850 60307112 -142778420 + AluJo SINE Alu 1 287 -25 302 239 0 9 chr5 60307283 60307392 -142778140 + GA-rich Low_complexity Low_complexity 3 110 0 898 185 0 0 chr5 60307552 60307703 -142777829 - FAM SINE Alu -11 174 24 410 264 107 14 chr5 60307859 60308395 -142777137 - L1ME4a LINE L1 -73 6843 6253 280 308 34 12 chr5 60308487 60308669 -142776863 - L1MCc LINE L1 -4955 1468 1367 2284 116 0 0 chr5 60308992 60309293 -142776239 - AluSx SINE Alu -11 301 1 1231 147 86 16 chr5 60309519 60309966 -142775566 - L1MB7 LINE L1 -87 6097 5683 7841 143 12 29 chr5 60309966 60311497 -142774035 - L1PA12 LINE L1 0 6168 4614 2491 27 41 0 chr5 60311497 60311791 -142773741 + AluY SINE Alu 1 306 -5 7841 143 12 29 chr5 60311791 60312019 -142773513 - L1PA12 LINE L1 -1554 4614 4384 2088 104 11 0 chr5 60312019 60312336 -142773196 - AluY SINE Alu 0 320 1 7841 143 12 29 chr5 60312336 60312685 -142772847 - L1PA12 LINE L1 -1784 4384 4066 1231 147 86 16 chr5 60312685 60312704 -142772828 - L1MB7 LINE L1 -501 5683 5528 2480 50 7 3 chr5 60312720 60313019 -142772513 - AluY SINE Alu -11 300 1 797 184 72 5 chr5 60313030 60313253 -142772279 - MER20B DNA MER1_type -32 751 514 348 189 0 0 chr5 60314065 60314118 -142771414 + Tigger5 DNA MER2_type 4 56 -2267 477 145 36 12 chr5 60314127 60314210 -142771322 + Tigger5 DNA MER2_type 2237 2321 -2 742 142 0 0 chr5 60314524 60314630 -142770902 - FLAM_C SINE Alu -36 107 2 252 258 195 63 chr5 60317341 60317500 -142768032 - MLT1L LTR MaLR -435 180 1 687 285 121 10 chr5 60317581 60317886 -142767646 - L1MC4a LINE L1 -1849 5959 5621 833 158 0 0 chr5 60318118 60318245 -142767287 + FLAM_C SINE Alu 1 127 -16 1639 183 3 26 chr5 60318258 60318564 -142766968 + AluJo SINE Alu 1 299 -13 1489 207 107 49 chr5 60318564 60319014 -142766518 + HsTC2a DNA Tc2 126 601 -143 414 186 0 0 chr5 60319027 60319113 -142766419 + C-rich Low_complexity Low_complexity 5 90 0 2016 136 4 0 chr5 60319113 60319392 -142766140 - AluSx SINE Alu -32 280 1 395 225 78 35 chr5 60319393 60319535 -142765997 + HsTC2a DNA Tc2 591 738 -4 6725 60 23 57 chr5 60319609 60321250 -142764282 - SVA Other Other -520 1383 327 370 339 16 0 chr5 60321434 60321555 -142763977 + L2 LINE L2 3187 3309 -4 189 0 0 0 chr5 60321623 60321644 -142763888 + (A)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr5 60321974 60322011 -142763521 + AT_rich Low_complexity Low_complexity 1 37 0 1540 176 13 36 chr5 60322636 60322938 -142762594 + AluJo SINE Alu 18 312 0 2132 130 3 3 chr5 60322940 60323241 -142762291 + AluSx SINE Alu 1 301 -11 962 292 84 26 chr5 60323361 60323999 -142761533 + L1MEd LINE L1 576 1251 -4878 1966 148 0 19 chr5 60324026 60324343 -142761189 + AluSx SINE Alu 1 311 -1 1527 197 100 204 chr5 60324607 60324972 -142760560 + L2 LINE L2 1818 2219 -1095 955 146 87 27 chr5 60324972 60325157 -142760375 - MER3 DNA MER1_type -2 207 12 1527 197 100 204 chr5 60325157 60325575 -142759957 + L2 LINE L2 2219 2684 -630 317 212 61 0 chr5 60325622 60325688 -142759844 + MER20 DNA MER1_type 66 135 -84 700 162 113 7 chr5 60325747 60325889 -142759643 - MIR SINE MIR -105 157 1 201 311 156 7 chr5 60326080 60326215 -142759317 + MIR SINE MIR 49 203 -59 1976 145 10 10 chr5 60326231 60326527 -142759005 - AluJb SINE Alu -16 296 1 214 252 0 0 chr5 60327188 60327237 -142758295 - MIR SINE MIR -85 123 74 307 298 177 0 chr5 60377287 60377428 -142708104 - L1 LINE L1 -2368 3778 3613 628 171 9 0 chr5 60377429 60377568 -142707964 - AluSg/x SINE Alu 0 315 176 1832 160 7 3 chr5 60377622 60377910 -142707622 + AluJb SINE Alu 21 309 -3 629 242 8 0 chr5 60378113 60378245 -142707287 - FLAM_A SINE Alu 0 133 1 2383 54 3 13 chr5 60379682 60379980 -142705552 - AluY SINE Alu -16 295 1 212 304 45 18 chr5 60380663 60380775 -142704757 + MIR SINE MIR 142 256 -6 37 0 0 0 chr5 60380969 60381006 -142704526 + AT_rich Low_complexity Low_complexity 1 37 0 227 167 24 0 chr5 60381033 60381075 -142704457 + MER58A DNA MER1_type 158 200 -24 325 48 0 0 chr5 60381192 60381234 -142704298 + AluY SINE Alu 1 42 -260 1969 109 33 0 chr5 60381234 60381510 -142704022 + AluSg SINE Alu 5 289 -21 1620 152 10 59 chr5 60381515 60381805 -142703727 - AluJb SINE Alu -36 276 1 2348 113 0 0 chr5 60383363 60383665 -142701867 - AluSx SINE Alu -10 302 1 1668 222 23 13 chr5 60383956 60384348 -142701184 + MSTD LTR MaLR 1 396 0 364 278 77 91 chr5 60385694 60385818 -142699714 + L1ME3A LINE L1 5965 6086 -84 1579 178 20 46 chr5 60385818 60386122 -142699410 - AluJo SINE Alu -6 306 11 364 278 77 91 chr5 60386122 60386206 -142699326 + L1ME3A LINE L1 6086 6170 0 1331 201 93 45 chr5 60386253 60386696 -142698836 + Charlie7 DNA MER1_type 1530 1993 -619 24 67 0 0 chr5 60386910 60386955 -142698577 + AT_rich Low_complexity Low_complexity 1 45 0 1331 174 71 44 chr5 60387189 60387483 -142698049 - AluJo SINE Alu -10 302 1 347 0 0 23 chr5 60387581 60387625 -142697907 + (TG)n Simple_repeat Simple_repeat 2 44 0 2113 121 10 7 chr5 60387793 60388091 -142697441 - AluSx SINE Alu -13 299 1 271 250 0 23 chr5 60388207 60388295 -142697237 + Charlie7 DNA MER1_type 2043 2128 -484 2128 127 6 16 chr5 60388300 60388614 -142696918 - AluJo SINE Alu -1 311 1 914 192 176 46 chr5 60390007 60390330 -142695202 + MLT1A1 LTR MaLR 1 365 0 503 286 56 16 chr5 60390680 60390932 -142694600 + L1ME LINE L1 5477 5738 -383 867 170 65 91 chr5 60391434 60391664 -142693868 + MER58A DNA MER1_type 1 224 0 1250 206 95 0 chr5 60392258 60392520 -142693012 + AluJo SINE Alu 1 287 -25 191 321 277 9 chr5 60392569 60392681 -142692851 + L2 LINE L2 3121 3262 -10 302 239 0 9 chr5 60392691 60392800 -142692732 + GA-rich Low_complexity Low_complexity 3 110 0 910 185 0 0 chr5 60392960 60393111 -142692421 - FAM SINE Alu -11 174 24 262 243 63 16 chr5 60393267 60393647 -142691885 - L1ME4a LINE L1 -73 6048 5645 2286 116 0 0 chr5 60394405 60394706 -142690826 - AluSx SINE Alu -11 301 1 1119 151 80 12 chr5 60394932 60395379 -142690153 - L1MB7 LINE L1 -87 6097 5682 7189 143 12 29 chr5 60395379 60396910 -142688622 - L1PA12 LINE L1 0 6168 4614 2432 31 41 0 chr5 60396910 60397204 -142688328 + AluY SINE Alu 1 306 -5 7189 143 12 29 chr5 60397204 60397432 -142688100 - L1PA12 LINE L1 -1554 4614 4384 2083 104 11 0 chr5 60397432 60397749 -142687783 - AluY SINE Alu 0 320 1 7189 143 12 29 chr5 60397749 60398098 -142687434 - L1PA12 LINE L1 -1784 4384 4066 1119 151 80 12 chr5 60398098 60398117 -142687415 - L1MB7 LINE L1 -502 5682 5528 2456 50 7 3 chr5 60398133 60398432 -142687100 - AluY SINE Alu -11 300 1 693 184 72 5 chr5 60398443 60398666 -142686866 - MER20B DNA MER1_type -32 751 514 324 189 0 0 chr5 60399478 60399531 -142686001 + Tigger5 DNA MER2_type 4 56 -2267 436 145 36 12 chr5 60399540 60399623 -142685909 + Tigger5 DNA MER2_type 2237 2321 -2 698 140 0 0 chr5 60399937 60400044 -142685488 - FLAM_C SINE Alu -36 107 1 566 285 121 10 chr5 60402994 60403299 -142682233 - L1MC4a LINE L1 -1849 5959 5621 838 158 0 0 chr5 60403531 60403658 -142681874 + FLAM_C SINE Alu 1 127 -16 1674 193 0 23 chr5 60403671 60403977 -142681555 + AluJo SINE Alu 1 299 -13 1299 209 106 42 chr5 60404002 60404427 -142681105 + HsTC2 DNA Tc2 1130 1757 -141 414 186 0 0 chr5 60404440 60404526 -142681006 + C-rich Low_complexity Low_complexity 5 90 0 2025 136 4 0 chr5 60404526 60404805 -142680727 - AluSx SINE Alu -32 280 1 331 225 78 35 chr5 60404806 60404948 -142680584 + HsTC2 DNA Tc2 1744 1891 -7 7681 23 0 209 chr5 60405022 60406358 -142679174 - SVA Other Other -3 1383 327 302 255 75 0 chr5 60406402 60406508 -142679024 - L1 LINE L1 -1811 4335 4222 386 339 16 0 chr5 60406542 60406663 -142678869 + L2 LINE L2 3187 3309 -4 189 0 0 0 chr5 60406731 60406752 -142678780 + (A)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr5 60407082 60407119 -142678413 + AT_rich Low_complexity Low_complexity 1 37 0 1568 176 13 36 chr5 60407744 60408046 -142677486 + AluJo SINE Alu 18 312 0 2151 130 3 3 chr5 60408048 60408349 -142677183 + AluSx SINE Alu 1 301 -11 748 289 81 26 chr5 60408469 60409050 -142676482 + L1MEd LINE L1 576 1188 -4931 1989 148 0 19 chr5 60409133 60409450 -142676082 + AluSx SINE Alu 1 311 -1 1553 197 100 204 chr5 60409714 60410079 -142675453 + L2 LINE L2 1818 2219 -1095 865 146 87 27 chr5 60410079 60410264 -142675268 - MER3 DNA MER1_type -2 207 12 1553 197 100 204 chr5 60410264 60410682 -142674850 + L2 LINE L2 2219 2684 -630 293 212 61 0 chr5 60410729 60410795 -142674737 + MER20 DNA MER1_type 66 135 -84 711 162 113 7 chr5 60410854 60410996 -142674536 - MIR SINE MIR -105 157 1 223 311 156 7 chr5 60411187 60411322 -142674210 + MIR SINE MIR 49 203 -59 1991 145 10 10 chr5 60411338 60411634 -142673898 - AluJb SINE Alu -16 296 1 204 338 35 10 chr5 60412295 60412402 -142673130 - MIR SINE MIR -85 123 12 1457 184 0 57 chr5 60412943 60413259 -142672273 + AluJo SINE Alu 1 298 -14 623 274 168 18 chr5 60413848 60414074 -142671458 + MIR SINE MIR 3 262 0 236 54 54 0 chr5 60414516 60414553 -142670979 + GA-rich Low_complexity Low_complexity 2 40 0 239 296 80 11 chr5 60414555 60414643 -142670889 - MIR SINE MIR -137 125 32 2265 88 0 7 chr5 60414786 60415083 -142670449 - AluSg SINE Alu -15 295 1 37 0 0 0 chr5 60415900 60415937 -142669595 + AT_rich Low_complexity Low_complexity 1 37 0 871 193 0 18 chr5 60416017 60416183 -142669349 - AluSg/x SINE Alu -13 297 135 424 150 0 100 chr5 60416183 60416263 -142669269 - AluJ/FLAM SINE Alu -238 74 3 1070 106 0 0 chr5 60416498 60416639 -142668893 + AluSg/x SINE Alu 83 223 -87 1708 196 3 50 chr5 60416801 60417183 -142668349 + MLT1A1 LTR MaLR 2 365 0 994 175 12 0 chr5 60417257 60417417 -142668115 + FRAM SINE Alu 1 161 -15 716 195 150 35 chr5 60417795 60417995 -142667537 - MER58A DNA MER1_type -1 223 1 783 205 22 38 chr5 60418494 60418679 -142666853 + AluJo SINE Alu 120 301 -11 2357 83 0 16 chr5 60418858 60419171 -142666361 + AluSc SINE Alu 1 308 -1 2138 111 0 20 chr5 60419277 60419575 -142665957 - AluSx SINE Alu -12 300 9 2369 86 0 19 chr5 60419677 60419992 -142665540 - AluSc SINE Alu 0 309 1 2403 83 0 3 chr5 60420085 60420398 -142665134 + AluSx SINE Alu 1 312 0 543 299 20 35 chr5 60420447 60420644 -142664888 + MIR3 SINE MIR 5 198 -10 333 219 0 3 chr5 60420798 60420894 -142664638 + AluJ/FRAM SINE Alu 228 297 -5 1730 136 11 14 chr5 60422184 60422487 -142663045 + AluJo SINE Alu 6 307 0 2171 97 4 0 chr5 60422513 60422812 -142662720 + AluSg SINE Alu 1 300 0 494 283 64 32 chr5 60422898 60423085 -142662447 - MIR SINE MIR -64 198 6 1612 267 92 27 chr5 60423396 60424104 -142661428 + L1M4 LINE L1 61 814 -5728 3185 215 81 25 chr5 60424157 60425358 -142660174 + L1M4 LINE L1 957 2322 -4324 826 179 43 73 chr5 60425369 60425515 -142660017 + L1M4 LINE L1 3031 3180 -3464 2005 131 21 46 chr5 60425515 60425888 -142659644 + THE1B LTR MaLR 1 364 0 12231 72 4 12 chr5 60425888 60427349 -142658183 + THE1B-int LTR MaLR 1 1449 -131 2017 141 0 10 chr5 60427349 60427647 -142657885 - AluSx SINE Alu -17 295 1 12231 72 4 12 chr5 60427647 60427774 -142657758 + THE1B-int LTR MaLR 1449 1576 -4 1983 121 18 82 chr5 60427778 60427940 -142657592 + THE1B LTR MaLR 1 172 -192 2402 104 3 0 chr5 60427940 60428248 -142657284 - AluSp SINE Alu -4 309 1 1983 121 18 82 chr5 60428248 60428474 -142657058 + THE1B LTR MaLR 172 364 0 826 179 43 73 chr5 60428474 60428555 -142656977 + L1M4 LINE L1 3182 3257 -3387 1130 182 5 20 chr5 60428563 60428766 -142656766 - AluJb SINE Alu -2 310 111 2155 145 0 0 chr5 60428818 60429122 -142656410 + AluJb SINE Alu 5 308 -4 475 186 0 0 chr5 60429122 60429224 -142656308 + L1M4 LINE L1 3534 3635 -3009 1157 161 14 32 chr5 60429258 60429475 -142656057 + AluJo SINE Alu 87 299 -13 673 254 40 4 chr5 60429477 60429725 -142655807 + L1M4 LINE L1 3654 3910 -2734 1462 290 51 14 chr5 60429972 60430538 -142654994 + L1ME LINE L1 12 598 -5472 1002 211 61 78 chr5 60430798 60430865 -142654667 + L1ME LINE L1 607 674 -5406 2128 111 3 3 chr5 60430865 60431172 -142654360 - AluSq SINE Alu -5 308 2 1002 211 61 78 chr5 60431172 60431700 -142653832 + L1ME LINE L1 674 1191 -4889 1709 125 54 14 chr5 60431719 60432015 -142653517 + AluSx SINE Alu 1 308 -4 2195 123 3 0 chr5 60432101 60432401 -142653131 + AluSx SINE Alu 5 305 -7 22 70 0 0 chr5 60432834 60432877 -142652655 + AT_rich Low_complexity Low_complexity 1 43 0 454 330 33 71 chr5 60432953 60433347 -142652185 - L2 LINE L2 -668 2646 2268 4231 163 86 48 chr5 60433884 60434781 -142650751 - MER21A LTR ERV1 0 931 1 1833 160 0 0 chr5 60434792 60435079 -142650453 - AluJb SINE Alu -13 299 13 547 210 10 0 chr5 60435284 60435384 -142650148 - FLAM_A SINE Alu -41 101 1 996 219 79 76 chr5 60435387 60435423 -142650109 - L1MC5 LINE L1 -232 7729 7695 1805 156 18 7 chr5 60435423 60435706 -142649826 + AluJb SINE Alu 1 286 -26 996 219 79 76 chr5 60435706 60436140 -142649392 - L1MC5 LINE L1 -266 7695 7258 1935 189 34 93 chr5 60436294 60436854 -142648678 - MER119 DNA MER1_type -22 561 35 918 205 40 40 chr5 60436904 60437052 -142648480 - MER58A DNA MER1_type -2196 224 74 1291 171 44 96 chr5 60437052 60437437 -142648095 + MLT1A1 LTR MaLR 1 365 0 918 205 40 40 chr5 60437437 60437512 -142648020 - MER58A DNA MER1_type -2345 75 1 582 187 60 33 chr5 60437532 60437637 -142647895 - L1MC5 LINE L1 -813 7148 7034 2152 113 0 20 chr5 60437637 60437939 -142647593 - AluSg SINE Alu -12 298 3 582 187 60 33 chr5 60437939 60438015 -142647517 - L1MC5 LINE L1 -927 7034 6962 21 0 0 0 chr5 60438052 60438073 -142647459 + AT_rich Low_complexity Low_complexity 1 21 0 2554 204 33 16 chr5 60438088 60438244 -142647288 - L1MC3 LINE L1 -2 8040 7888 276 30 0 0 chr5 60438244 60438277 -142647255 + (TC)n Simple_repeat Simple_repeat 1 33 0 2554 204 33 16 chr5 60438277 60438760 -142646772 - L1MC3 LINE L1 -154 7888 7405 641 226 93 124 chr5 60438775 60439342 -142646190 + MLT1H1 LTR MaLR 3 555 0 967 187 95 27 chr5 60439346 60439608 -142645924 - L1MC4 LINE L1 -661 7381 7102 2060 224 125 7 chr5 60439681 60440361 -142645171 - L1MC4 LINE L1 -1794 6014 5255 363 281 142 39 chr5 60440381 60440662 -142644870 - L1MC4 LINE L1 -913 5233 4924 707 276 45 5 chr5 60440668 60440889 -142644643 - L2 LINE L2 -1307 2007 1778 443 104 0 0 chr5 60440983 60441050 -142644482 - LTR33A LTR ERVL 0 523 457 385 331 61 18 chr5 60441050 60441213 -142644319 - MER91A DNA MER1_type -26 170 1 311 213 240 0 chr5 60441214 60441289 -142644243 - MIR SINE MIR -113 149 57 355 117 17 0 chr5 60441951 60442011 -142643521 + MER113 DNA MER1_type? 1 61 -460 946 121 34 19 chr5 60442031 60442293 -142643239 + CT-rich Low_complexity Low_complexity 2 267 0 2157 61 44 3 chr5 60442293 60442589 -142642943 - AluY SINE Alu -3 308 1 2047 128 24 0 chr5 60442972 60443269 -142642263 - AluSx SINE Alu -8 304 1 231 315 0 0 chr5 60443873 60443927 -142641605 + L2 LINE L2 3207 3260 -12 224 77 26 0 chr5 60444469 60444508 -142641024 + (AATTG)n Simple_repeat Simple_repeat 4 43 0 1787 100 114 15 chr5 60444667 60444938 -142640594 - AluY SINE Alu -13 298 1 642 182 0 0 chr5 60444955 60445065 -142640467 + AluJo/FLAM SINE Alu 1 110 -202 1432 166 8 12 chr5 60445065 60445340 -142640192 + AluJo SINE Alu 39 312 0 2408 52 3 13 chr5 60445587 60445894 -142639638 - AluY SINE Alu -7 304 1 2135 107 30 0 chr5 60446195 60446493 -142639039 - AluSx SINE Alu -5 307 1 619 171 101 31 chr5 60448953 60449082 -142636450 - FLAM_C SINE Alu -3 140 3 1892 146 14 0 chr5 60449228 60449522 -142636010 - AluSx SINE Alu -14 298 1 2196 103 0 45 chr5 60449565 60449876 -142635656 - AluSx SINE Alu -15 297 1 1986 145 0 3 chr5 60450562 60450858 -142634674 + AluSx SINE Alu 1 295 -17 197 297 241 19 chr5 60451894 60452106 -142633426 - L2 LINE L2 -171 3142 2884 1147 213 149 8 chr5 60452107 60452469 -142633063 - MLT1D LTR MaLR 0 505 93 2236 120 0 0 chr5 60452478 60452786 -142632746 - AluSx SINE Alu -4 308 1 2189 97 3 26 chr5 60453926 60454237 -142631295 - AluSp SINE Alu -9 304 1 1849 155 13 3 chr5 60454476 60454779 -142630753 - AluJb SINE Alu -6 306 1 446 222 70 3 chr5 60454835 60455002 -142630530 - MER58B DNA MER1_type 0 341 1 1411 179 38 75 chr5 60456008 60456157 -142629375 + AluJo SINE Alu 1 133 -179 2243 112 10 7 chr5 60456157 60456461 -142629071 + AluSc SINE Alu 1 305 -4 1411 179 38 75 chr5 60456461 60456630 -142628902 + AluJo SINE Alu 133 307 -5 965 155 77 10 chr5 60456644 60456851 -142628681 - L1MB3 LINE L1 -28 6155 5935 22 35 0 0 chr5 60457689 60457718 -142627814 + AT_rich Low_complexity Low_complexity 1 29 0 1506 199 0 43 chr5 60458199 60458500 -142627032 + AluJo SINE Alu 4 291 -21 353 262 81 105 chr5 60458501 60458673 -142626859 - HAL1 LINE L1 -1651 856 689 23 0 0 0 chr5 60459168 60459191 -142626341 + AT_rich Low_complexity Low_complexity 1 23 0 511 305 66 34 chr5 60459909 60460288 -142625244 - L1MB3 LINE L1 -352 5818 5414 2060 145 0 3 chr5 60460288 60460591 -142624941 - AluJo SINE Alu -9 303 2 511 305 66 34 chr5 60460591 60460753 -142624779 - L1MB3 LINE L1 -756 5414 5259 275 175 0 0 chr5 60461153 60461210 -142624322 - L1MB2 LINE L1 -1 6170 6114 24 0 0 0 chr5 60461210 60461234 -142624298 + AT_rich Low_complexity Low_complexity 1 24 0 17123 28 6 0 chr5 60461242 60464046 -142621486 - L1PA3 LINE L1 -4 6151 3334 296 252 28 19 chr5 60464077 60464184 -142621348 - L1MB3 LINE L1 -1162 4984 4877 379 310 129 20 chr5 60464208 60464666 -142620866 - L1MB3 LINE L1 -1983 4163 3656 820 256 116 53 chr5 60464776 60465249 -142620283 - L1ME3A LINE L1 0 6170 5668 554 234 170 0 chr5 60465255 60465396 -142620136 + MER5A DNA MER1_type 7 171 -18 187 260 96 67 chr5 60465480 60465584 -142619948 + MIR SINE MIR 30 136 -72 3411 79 31 2 chr5 60466172 60466654 -142618878 - L1PB1 LINE L1 -1 6150 5655 1984 152 0 3 chr5 60466818 60467120 -142618412 + AluSx SINE Alu 3 303 -9 382 264 116 64 chr5 60467298 60467780 -142617752 - L1MB3 LINE L1 -2481 3665 3159 270 0 0 0 chr5 60467781 60467811 -142617721 + (A)n Simple_repeat Simple_repeat 1 30 0 1442 173 12 24 chr5 60467820 60468068 -142617464 - AluJo SINE Alu -31 281 37 435 258 56 56 chr5 60468219 60468432 -142617100 - L1MB3 LINE L1 -3201 2945 2733 25 31 0 0 chr5 60468795 60468827 -142616705 + AT_rich Low_complexity Low_complexity 1 32 0 205 86 0 29 chr5 60469408 60469443 -142616089 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr5 60470181 60470209 -142615323 + AT_rich Low_complexity Low_complexity 1 28 0 2207 114 10 7 chr5 60470510 60470818 -142614714 - AluSq SINE Alu -2 311 3 22 56 0 0 chr5 60472307 60472343 -142613189 + AT_rich Low_complexity Low_complexity 1 36 0 289 258 72 31 chr5 60473474 60473571 -142611961 - MER5A DNA MER1_type -71 118 18 384 337 112 6 chr5 60473608 60473786 -142611746 + MIR SINE MIR 35 231 -31 216 0 0 0 chr5 60474324 60474348 -142611184 + (TA)n Simple_repeat Simple_repeat 2 25 0 503 329 82 16 chr5 60474483 60474726 -142610806 + MIR SINE MIR 4 262 0 1980 110 0 47 chr5 60474727 60475027 -142610505 - AluSg SINE Alu -24 286 1 477 175 29 0 chr5 60475132 60475235 -142610297 - L1MD3 LINE L1 0 7995 7890 288 308 13 0 chr5 60475822 60475900 -142609632 + MER5A DNA MER1_type 98 176 -13 2076 116 0 7 chr5 60476068 60476362 -142609170 + AluSx SINE Alu 1 292 -20 187 270 0 0 chr5 60476523 60476560 -142608972 + L2 LINE L2 3213 3249 -23 5059 194 27 2 chr5 60477037 60478339 -142607193 - L1PA15 LINE L1 -1 6164 4830 670 184 7 14 chr5 60478339 60478480 -142607052 + L1P LINE L1 4203 4342 -1804 * 1404 144 54 7 chr5 60478479 60478757 -142606775 + L1 LINE L1 4541 4831 -1315 2004 134 10 7 chr5 60478761 60479066 -142606466 - AluSx SINE Alu -6 306 1 1362 225 160 43 chr5 60480048 60480796 -142604736 - L1ME3A LINE L1 -28 6142 5293 232 104 83 0 chr5 60480788 60480836 -142604696 - L1MC4 LINE L1 0 8042 7991 * 2111 82 50 0 chr5 60480844 60481124 -142604408 + AluSx SINE Alu 1 294 -18 731 294 55 3 chr5 60481137 60481429 -142604103 - L1ME3A LINE L1 -1150 4996 4690 1851 139 120 21 chr5 60481430 60481812 -142603720 + MSTB1 LTR MaLR 1 420 -12 292 235 25 12 chr5 60481824 60481905 -142603627 - L1ME3A LINE L1 -1452 4694 4613 1705 138 16 4 chr5 60481907 60482160 -142603372 - MLT1A1 LTR MaLR 0 365 110 2491 156 55 48 chr5 60482162 60482524 -142603008 - L1M4 LINE L1 -390 6292 5934 1738 178 10 7 chr5 60482524 60482827 -142602705 - AluJb SINE Alu -8 304 1 2491 156 55 48 chr5 60482827 60483050 -142602482 - L1M4 LINE L1 -748 5934 5714 1896 168 0 7 chr5 60483050 60483353 -142602179 - AluJo SINE Alu -11 301 1 2491 156 55 48 chr5 60483353 60483664 -142601868 - L1M4 LINE L1 -968 5714 5402 479 186 39 0 chr5 60483674 60483776 -142601756 - L1M4 LINE L1 -4850 1692 1587 2112 193 102 8 chr5 60483776 60484284 -142601248 - L1MB4 LINE L1 -3 6177 5622 735 219 128 5 chr5 60484281 60484477 -142601055 - L1M4 LINE L1 -6318 224 5 * 2277 103 3 0 chr5 60484739 60485041 -142600491 + AluSx SINE Alu 1 303 -9 351 268 85 65 chr5 60485097 60485343 -142600189 + L1MEd LINE L1 1227 1477 -4895 318 291 104 72 chr5 60485418 60485762 -142599770 + L1MEd LINE L1 1527 1825 -4559 653 190 41 8 chr5 60486222 60486343 -142599189 + AluJb SINE Alu 1 125 -187 920 87 0 0 chr5 60486371 60486486 -142599046 + 5S rRNA rRNA 3 117 -4 1206 89 11 11 chr5 60486486 60486665 -142598867 + L1PA10 LINE L1 5987 6165 -3 332 252 36 36 chr5 60487119 60487258 -142598274 + L1MEd LINE L1 3149 3287 -3095 2306 99 0 0 chr5 60487512 60487806 -142597726 + AluSx SINE Alu 1 294 -18 235 246 158 44 chr5 60488989 60489103 -142596429 + MIR SINE MIR 114 240 -22 256 212 61 0 chr5 60489768 60489834 -142595698 + (TTTAG)n Simple_repeat Simple_repeat 5 74 0 2022 133 17 0 chr5 60490395 60490689 -142594843 + AluSx SINE Alu 1 299 -13 396 271 104 7 chr5 60491079 60491223 -142594309 + L1MC/D LINE L1 5611 5768 -2040 1925 106 23 4 chr5 60491225 60491490 -142594042 + AluSc SINE Alu 3 272 -37 2254 105 13 0 chr5 60491687 60491992 -142593540 - AluSx SINE Alu -3 309 1 3279 134 8 71 chr5 60492483 60492534 -142592998 - MLT2B3 LTR ERVL 0 554 501 606 28 0 0 chr5 60492534 60492606 -142592926 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 3279 134 8 71 chr5 60492606 60492742 -142592790 - MLT2B3 LTR ERVL -53 501 358 1998 97 14 3 chr5 60492742 60493030 -142592502 - L1PA6 LINE L1 0 6154 5864 3279 134 8 71 chr5 60493030 60493432 -142592100 - MLT2B3 LTR ERVL -196 358 1 2412 172 43 47 chr5 60493432 60493921 -142591611 + MER68 LTR ERV1 76 562 0 1512 198 46 3 chr5 60496792 60497075 -142588457 + AluJo SINE Alu 1 295 -17 280 250 31 97 chr5 60497289 60497383 -142588149 - L1ME LINE L1 -357 5764 5688 1671 181 28 3 chr5 60497383 60497671 -142587861 + AluJb SINE Alu 1 295 -17 280 250 31 97 chr5 60497671 60497772 -142587760 - L1ME LINE L1 -433 5688 5582 1370 219 201 35 chr5 60497823 60498219 -142587313 - MLT1F1 LTR MaLR -4 563 71 907 221 0 22 chr5 60498219 60498400 -142587132 - MER45A DNA AcHobo 0 178 2 1370 219 201 35 chr5 60498400 60498486 -142587046 - MLT1F1 LTR MaLR -496 71 1 470 98 12 0 chr5 60498633 60498715 -142586817 + L1PB2 LINE L1 6069 6151 0 2304 104 0 3 chr5 60498737 60499044 -142586488 - AluSx SINE Alu -6 306 1 369 329 81 47 chr5 60499390 60499624 -142585908 - MIR SINE MIR -13 249 8 736 193 82 72 chr5 60500276 60500428 -142585104 - MER3 DNA MER1_type 0 209 53 2161 101 0 47 chr5 60500428 60500746 -142584786 + AluSc SINE Alu 1 303 -6 736 193 82 72 chr5 60500746 60500800 -142584732 - MER3 DNA MER1_type -156 53 1 1474 73 5 0 chr5 60500947 60501139 -142584393 - AluY SINE Alu 0 311 119 29 28 0 0 chr5 60501412 60501448 -142584084 + AT_rich Low_complexity Low_complexity 1 36 0 345 24 0 0 chr5 60501622 60501664 -142583868 + (TG)n Simple_repeat Simple_repeat 2 43 0 461 182 0 11 chr5 60502027 60502115 -142583417 + Tigger5 DNA MER2_type 2237 2323 0 739 331 66 46 chr5 60502116 60502614 -142582918 - ERVL LTR ERVL -808 4956 4449 326 188 167 14 chr5 60502629 60502767 -142582765 + HsTC2 DNA Tc2 1713 1871 -27 2301 77 0 55 chr5 60502773 60503098 -142582434 - AluSq SINE Alu -6 307 1 193 357 54 27 chr5 60503249 60503361 -142582171 - L2 LINE L2 -6 3307 3193 2348 90 3 0 chr5 60503562 60503863 -142581669 - AluSp SINE Alu -11 302 1 1734 181 0 17 chr5 60504086 60504374 -142581158 + AluJb SINE Alu 1 283 -29 1969 196 73 75 chr5 60504393 60504939 -142580593 - MLT2B3 LTR ERVL -8 546 2 223 337 114 24 chr5 60504946 60505112 -142580420 + L2 LINE L2 2524 2704 -610 186 43 0 0 chr5 60505402 60505425 -142580107 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1951 146 3 13 chr5 60505427 60505742 -142579790 - AluJb SINE Alu 0 312 1 229 336 142 0 chr5 60505899 60506012 -142579520 + L2 LINE L2 3139 3267 -5 21 36 0 0 chr5 60507205 60507233 -142578299 + AT_rich Low_complexity Low_complexity 1 28 0 1504 204 27 3 chr5 60507661 60507955 -142577577 - AluJo SINE Alu -7 305 5 1808 174 3 10 chr5 60507962 60508272 -142577260 - AluJb SINE Alu -4 308 1 662 229 21 7 chr5 60508693 60508833 -142576699 - MIR SINE MIR -29 233 92 2370 80 0 7 chr5 60508921 60509221 -142576311 - AluY SINE Alu -13 298 1 562 249 66 42 chr5 60509593 60509702 -142575830 - LTR37A LTR ERV1 -53 373 268 1234 113 24 97 chr5 60509702 60509950 -142575582 - MER30 DNA MER1_type 0 230 1 562 249 66 42 chr5 60509950 60510081 -142575451 - LTR37A LTR ERV1 -158 268 127 251 161 16 32 chr5 60510346 60510408 -142575124 - MER31-int LTR ERV1 -910 5421 5361 834 234 20 80 chr5 60510419 60510718 -142574814 - MER31-int LTR ERV1 -876 4060 3780 1738 42 0 5 chr5 60510835 60511050 -142574482 - L1PA5 LINE L1 -170 5984 5771 * 43201 42 3 1 chr5 60511044 60517183 -142568349 - L1PA3 LINE L1 -1 6154 2 275 213 0 33 chr5 60517275 60517336 -142568196 - Charlie1 DNA MER1_type -2667 94 36 212 377 0 13 chr5 60517435 60517512 -142568020 + MER5B DNA MER1_type 103 178 0 1056 150 109 41 chr5 60517773 60517822 -142567710 - MER46A DNA MER2_type -2496 235 191 2187 116 0 3 chr5 60517822 60518125 -142567407 - AluSq SINE Alu -11 302 1 1056 150 109 41 chr5 60518125 60518295 -142567237 - MER46A DNA MER2_type -2540 191 1 183 204 0 0 chr5 60518712 60518756 -142566776 + T-rich Low_complexity Low_complexity 1 44 0 289 280 86 0 chr5 60519057 60519150 -142566382 + Charlie1 DNA MER1_type 11 111 -2650 328 213 131 16 chr5 60519171 60519293 -142566239 + Charlie1 DNA MER1_type 2625 2760 -1 337 193 17 59 chr5 60519879 60519998 -142565534 - MER31-int LTR ERV1 -3650 1286 1173 2283 46 0 98 chr5 60519998 60520324 -142565208 + AluY SINE Alu 1 294 -17 243 290 278 57 chr5 60520331 60520648 -142564884 + L2 LINE L2 2927 3313 0 198 247 24 94 chr5 60521239 60521324 -142564208 - L2 LINE L2 -26 3246 3168 253 285 57 8 chr5 60522086 60522209 -142563323 + MIR SINE MIR 124 252 -10 1902 139 28 3 chr5 60522220 60522508 -142563024 - AluSg SINE Alu -15 295 1 2076 126 3 46 chr5 60523479 60523805 -142561727 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 60524154 60524178 -142561354 + AT_rich Low_complexity Low_complexity 1 24 0 2091 87 31 10 chr5 60525188 60525476 -142560056 - AluSg SINE Alu -16 294 1 227 220 330 0 chr5 60525677 60525768 -142559764 + L1M4 LINE L1 4904 5024 -1122 667 79 0 0 chr5 60525990 60526079 -142559453 + L1PA5 LINE L1 6066 6154 0 1707 137 50 42 chr5 60526652 60527010 -142558522 - MER46B DNA MER2_type 0 236 1 394 285 133 7 chr5 60527645 60527796 -142557736 - HAL1 LINE L1 -1197 1310 1141 2181 139 92 9 chr5 60528014 60528437 -142557095 - Tigger5 DNA MER2_type 0 2323 1866 1012 196 71 22 chr5 60528419 60528643 -142556889 - Tigger5 DNA MER2_type -2085 238 4 * 441 168 248 0 chr5 60529096 60529197 -142556335 - FLAM_C SINE Alu -6 127 2 215 241 172 17 chr5 60531409 60531467 -142554065 + MIR SINE MIR 36 102 -160 2827 201 102 9 chr5 60531469 60532226 -142553306 - L1ME3 LINE L1 0 6162 5336 2727 175 27 70 chr5 60532256 60532896 -142552636 - LTR9 LTR ERV1 0 612 1 1005 256 76 39 chr5 60533007 60533390 -142552142 - MLT1J2 LTR MaLR -8 442 46 1137 173 41 6 chr5 60534182 60534478 -142551054 - MER3 DNA MER1_type 0 2619 2233 625 136 18 0 chr5 60534485 60534595 -142550937 - MER3 DNA MER1_type -87 122 58 2023 194 162 38 chr5 60535580 60536192 -142549340 - MER76 LTR ERV 0 688 1 514 195 44 9 chr5 60536232 60536345 -142549187 + HsTC2 DNA Tc2 8 124 -1774 237 203 34 0 chr5 60536342 60536401 -142549131 + HsTC2 DNA Tc2 1230 1290 -608 * 1614 286 41 19 chr5 60537463 60537995 -142547537 - MLT1E LTR MaLR 0 593 50 226 205 39 13 chr5 60538516 60538594 -142546938 - L1MCc LINE L1 -6321 102 23 192 77 0 0 chr5 60538746 60538772 -142546760 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1807 144 49 38 chr5 60539326 60539693 -142545839 + THE1C LTR MaLR 1 371 -4 2102 131 111 35 chr5 60539896 60540292 -142545240 + MSTB LTR MaLR 1 426 0 2059 59 55 7 chr5 60541383 60541683 -142543849 + AluY SINE Alu 1 313 0 588 193 33 67 chr5 60541698 60541848 -142543684 - MER45A DNA AcHobo 0 178 34 401 131 0 0 chr5 60542147 60542208 -142543324 + AluJ/FLAM SINE Alu 1 61 -251 1509 111 10 0 chr5 60542209 60542417 -142543115 + AluSp SINE Alu 95 304 -9 188 273 13 65 chr5 60542480 60542557 -142542975 + L2 LINE L2 3155 3227 -45 299 222 0 12 chr5 60542647 60542728 -142542804 - LTR16A LTR ERVL -81 369 290 1448 172 34 89 chr5 60542742 60542908 -142542624 - AluJo SINE Alu -4 308 167 2147 142 0 0 chr5 60542908 60543203 -142542329 - AluSx SINE Alu -17 295 1 1448 172 34 89 chr5 60543203 60543362 -142542170 - AluJo SINE Alu -145 167 1 314 197 26 53 chr5 60543362 60543427 -142542105 - MER5A DNA MER1_type -115 74 10 269 309 40 40 chr5 60543978 60544153 -142541379 + MARNA DNA Mariner 1 175 -411 937 142 42 90 chr5 60544168 60544380 -142541152 + MER105 DNA DNA 3 204 0 32 26 0 0 chr5 60544449 60544488 -142541044 + AT_rich Low_complexity Low_complexity 1 39 0 825 191 156 11 chr5 60544672 60544701 -142540831 - MER33 DNA MER1_type -2261 324 301 2071 116 20 0 chr5 60544701 60544993 -142540539 + AluSx SINE Alu 1 298 -14 825 191 156 11 chr5 60544993 60545246 -142540286 - MER33 DNA MER1_type -2284 301 1 209 278 19 0 chr5 60545363 60545417 -142540115 + CT-rich Low_complexity Low_complexity 2 56 0 460 248 33 0 chr5 60545420 60545541 -142539991 - L2 LINE L2 -1175 2139 2015 477 207 140 18 chr5 60545541 60545705 -142539827 - MER63B DNA MER1_type -3 432 249 1227 164 66 27 chr5 60547816 60548072 -142537460 - MER63B DNA MER1_type -170 266 1 448 290 32 42 chr5 60548072 60548289 -142537243 - L2 LINE L2 -1289 2025 1811 411 320 67 67 chr5 60548332 60548688 -142536844 + L2 LINE L2 2890 3245 -27 836 167 26 13 chr5 60549502 60549658 -142535874 - MLT1C LTR MaLR -8 459 302 820 146 16 0 chr5 60549677 60549800 -142535732 - FLAM_C SINE Alu -18 125 1 748 202 73 65 chr5 60549801 60550087 -142535445 - MLT1C LTR MaLR -151 316 15 183 337 43 119 chr5 60550190 60550493 -142535039 + L2 LINE L2 2944 3223 -49 1293 248 3 0 chr5 60551237 60551600 -142533932 - L1MCa LINE L1 -3549 2877 2514 444 97 14 0 chr5 60551735 60551807 -142533725 - L1PA16 LINE L1 -9 6157 6085 1705 128 34 17 chr5 60551807 60552252 -142533280 + L1MCa LINE L1 1484 2023 -4403 6308 168 71 24 chr5 60552268 60553165 -142532367 - L1MCa LINE L1 -4960 1466 480 1754 153 40 35 chr5 60553165 60553538 -142531994 + THE1C LTR MaLR 1 375 0 6308 168 71 24 chr5 60553538 60554022 -142531510 - L1MCa LINE L1 -5946 480 20 515 213 138 44 chr5 60554139 60554283 -142531249 + MIR3 SINE MIR 32 194 -14 1783 108 21 0 chr5 60554283 60554523 -142531009 + AluSg SINE Alu 47 291 -19 515 213 138 44 chr5 60554523 60554538 -142530994 + MIR3 SINE MIR 194 206 -2 2836 172 106 119 chr5 60554629 60554683 -142530849 - L1MC3 LINE L1 -2 7783 7730 2172 112 48 0 chr5 60554683 60555020 -142530512 + AluSg SINE Alu 1 310 0 2836 172 106 119 chr5 60555020 60555033 -142530499 - L1MC3 LINE L1 -55 7730 7718 1967 110 46 18 chr5 60555033 60555314 -142530218 + AluSx SINE Alu 1 289 -23 2836 172 106 119 chr5 60555314 60555861 -142529671 - L1MC3 LINE L1 -67 7718 7088 284 196 0 124 chr5 60555861 60555958 -142529574 - MLT1F1 LTR MaLR -448 119 35 2836 172 106 119 chr5 60555958 60556287 -142529245 - L1MC3 LINE L1 -697 7088 6756 275 281 18 18 chr5 60556314 60556428 -142529104 - L1ME LINE L1 -393 5728 5615 3766 251 71 35 chr5 60556788 60558325 -142527207 - HAL1 LINE L1 0 2507 916 2927 179 19 43 chr5 60558468 60558530 -142527002 + MER82 DNA MER2_type 9 71 -582 2336 92 3 16 chr5 60558530 60558845 -142526687 + AluSp SINE Alu 2 312 -1 2927 179 19 43 chr5 60558845 60559406 -142526126 + MER82 DNA MER2_type 71 617 -36 629 204 145 7 chr5 60659730 60659882 -142425650 - MER45A DNA AcHobo -5 173 1 1939 204 49 0 chr5 60660889 60661237 -142424295 - MLT1A1 LTR MaLR 0 365 1 1636 240 59 42 chr5 60661384 60661980 -142423552 - L1M4c LINE L1 -4551 1833 1228 186 43 0 0 chr5 60661990 60662013 -142423519 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 9774 62 13 79 chr5 60662018 60663479 -142422053 - SVA Other Other -17 1369 6 198 0 0 0 chr5 60665390 60665412 -142420120 + (A)n Simple_repeat Simple_repeat 1 22 0 315 0 0 0 chr5 60665412 60665447 -142420085 + (TA)n Simple_repeat Simple_repeat 2 36 0 341 214 127 48 chr5 60665468 60665594 -142419938 + MER103 DNA DNA 29 164 -2 487 176 22 0 chr5 60665845 60665936 -142419596 + L1PA14 LINE L1 738 830 -6751 189 0 0 0 chr5 60666397 60666418 -142419114 + (A)n Simple_repeat Simple_repeat 1 21 0 315 0 0 0 chr5 60666418 60666453 -142419079 + (TA)n Simple_repeat Simple_repeat 2 36 0 414 191 127 48 chr5 60666474 60666600 -142418932 + MER103 DNA DNA 29 164 -2 11848 159 36 2 chr5 60666851 60670317 -142415215 + L1PA14 LINE L1 1278 4866 -2718 9565 163 29 2 chr5 60670324 60670948 -142414584 + L1PA14 LINE L1 5146 5752 -1847 2622 24 0 0 chr5 60670948 60671239 -142414293 + AluYb8 SINE Alu 28 318 0 9565 163 29 2 chr5 60671239 60672105 -142413427 + L1PA14 LINE L1 5752 6593 -1006 2379 74 6 13 chr5 60672105 60672417 -142413115 + AluY SINE Alu 1 310 -1 9565 163 29 2 chr5 60672417 60673354 -142412178 + L1PA14 LINE L1 6593 7580 -19 274 287 43 0 chr5 60673821 60673915 -142411617 - MER112 DNA MER1_type -6 254 157 2443 57 30 0 chr5 60673956 60674257 -142411275 + AluY SINE Alu 1 310 -1 1555 244 31 58 chr5 60674331 60674815 -142410717 - L1ME3A LINE L1 -195 5975 5504 254 280 176 8 chr5 60675723 60675848 -142409684 + MER91A DNA MER1_type 50 195 -1 1408 184 24 20 chr5 60675979 60676272 -142409260 + MER33 DNA MER1_type 17 310 -14 671 281 109 0 chr5 60676285 60676495 -142409037 + MIR SINE MIR 30 262 0 232 143 0 0 chr5 60676740 60676775 -142408757 - AluJo SINE Alu -13 307 273 258 136 0 0 chr5 60677209 60677253 -142408279 + (A)n Simple_repeat Simple_repeat 1 44 0 850 276 197 30 chr5 60678516 60678974 -142406558 + L3 LINE CR1 670 1231 -346 2476 79 0 0 chr5 60678974 60679279 -142406253 - AluSq SINE Alu -8 305 1 850 276 197 30 chr5 60679279 60679352 -142406180 + L3 LINE CR1 1231 1290 -287 28 71 0 0 chr5 60681421 60681477 -142404055 + AT_rich Low_complexity Low_complexity 1 56 0 315 161 0 0 chr5 60682022 60682078 -142403454 - L1MB2 LINE L1 -180 5991 5936 233 214 0 0 chr5 60684993 60685035 -142400497 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 1225 206 111 63 chr5 60686556 60686998 -142398534 + LTR37B LTR ERV1 6 468 0 1752 189 0 10 chr5 60687611 60687907 -142397625 - AluJo SINE Alu -14 298 6 1243 174 0 19 chr5 60687936 60688149 -142397383 + AluJo SINE Alu 88 296 -16 411 21 0 0 chr5 60689110 60689158 -142396374 + (TG)n Simple_repeat Simple_repeat 2 49 0 3371 87 11 20 chr5 60689291 60689739 -142395793 - MLT2A1 LTR ERVL 0 444 1 180 0 0 0 chr5 60690592 60690612 -142394920 + (TTG)n Simple_repeat Simple_repeat 2 21 0 204 235 20 0 chr5 60690847 60690898 -142394634 - L2 LINE L2 -1 3312 3261 231 350 120 8 chr5 60691161 60691278 -142394254 + L2 LINE L2 3140 3269 -3 214 164 0 109 chr5 60692115 60692138 -142393394 + MIR SINE MIR 82 106 -102 2226 143 110 15 chr5 60692138 60692529 -142393003 + MSTA LTR MaLR 1 428 0 214 164 0 109 chr5 60692529 60692560 -142392972 + MIR SINE MIR 106 130 -78 547 301 70 48 chr5 60693103 60693568 -142391964 - L2 LINE L2 -25 3288 2737 708 254 46 52 chr5 60693570 60693944 -142391588 - L1MDb LINE L1 -5040 1369 1137 195 308 39 26 chr5 60695301 60695379 -142390153 - MIR SINE MIR -100 108 30 207 0 0 0 chr5 60695740 60695763 -142389769 + (T)n Simple_repeat Simple_repeat 1 23 0 270 170 0 0 chr5 60695815 60695862 -142389670 - L2 LINE L2 0 3313 3267 1207 242 69 32 chr5 60695940 60696345 -142389187 + LTR16C LTR ERVL 61 480 -11 345 172 31 0 chr5 60696531 60696595 -142388937 + MER116 DNA Mariner 1 66 -14 1525 163 8 0 chr5 60696690 60696936 -142388596 - AluSx SINE Alu -64 248 1 741 285 91 7 chr5 60697029 60697303 -142388229 - MLT1J LTR MaLR -205 306 10 219 69 0 0 chr5 60697446 60697475 -142388057 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2120 147 0 0 chr5 60697578 60697885 -142387647 - AluSx SINE Alu -5 307 1 388 305 129 14 chr5 60698331 60698986 -142386546 - L1MC/D LINE L1 -655 5587 4860 381 43 0 0 chr5 60699116 60699163 -142386369 + (CA)n Simple_repeat Simple_repeat 2 48 0 390 348 39 0 chr5 60699753 60699934 -142385598 + MIR3 SINE MIR 13 200 -8 380 273 63 81 chr5 60700780 60701051 -142384481 + L2 LINE L2 2804 3069 -203 28 29 0 0 chr5 60701503 60701538 -142383994 + AT_rich Low_complexity Low_complexity 1 35 0 467 276 132 52 chr5 60702354 60702717 -142382815 + MLT1L LTR MaLR 164 555 -60 441 235 39 20 chr5 60702792 60702894 -142382638 - L2 LINE L2 -1 3271 3168 3564 147 21 50 chr5 60704103 60704531 -142381001 + MER6A DNA MER2_type 4 443 -422 2532 62 3 0 chr5 60704531 60704838 -142380694 + AluY SINE Alu 1 308 -3 3564 147 21 50 chr5 60704838 60704849 -142380683 + MER6A DNA MER2_type 443 453 -412 1790 154 3 20 chr5 60704849 60705147 -142380385 - AluJo SINE Alu -19 293 1 3564 147 21 50 chr5 60705147 60705326 -142380206 + MER6A DNA MER2_type 453 605 0 325 387 0 0 chr5 60705404 60705523 -142380009 - L2 LINE L2 -15 3257 3139 2775 133 36 2 chr5 60707010 60707424 -142378108 - MSTA LTR MaLR 0 428 1 466 301 31 0 chr5 60707439 60707602 -142377930 + MIR3 SINE MIR 32 199 -9 287 94 0 19 chr5 60709440 60709493 -142376039 + (TC)n Simple_repeat Simple_repeat 2 53 0 315 0 0 0 chr5 60709493 60709528 -142376004 + (CA)n Simple_repeat Simple_repeat 1 35 0 915 270 62 78 chr5 60709606 60710135 -142375397 + L1MC/D LINE L1 50 570 -5549 5624 100 25 0 chr5 60710137 60710925 -142374607 + L1PB1 LINE L1 5342 6149 -2 331 195 153 25 chr5 60711002 60711120 -142374412 + L1MC/D LINE L1 661 793 -5326 557 253 119 36 chr5 60711234 60711699 -142373833 + L1MC/D LINE L1 4926 5429 -732 228 275 29 43 chr5 60711702 60711771 -142373761 + L1MC/D LINE L1 5510 5577 -2214 2172 140 17 42 chr5 60712031 60712062 -142373470 - MER7A DNA MER2_type -2692 346 316 2228 116 3 0 chr5 60712062 60712373 -142373159 - AluSx SINE Alu 0 312 1 2172 140 17 42 chr5 60712373 60712698 -142372834 - MER7A DNA MER2_type -2722 316 1 232 311 0 0 chr5 60712927 60712988 -142372544 - L2 LINE L2 -1 3312 3252 825 259 24 5 chr5 60713213 60713418 -142372114 - MIR SINE MIR -36 226 18 196 286 0 18 chr5 60713504 60713560 -142371972 - MIR3 SINE MIR -3 205 151 302 296 130 0 chr5 60713569 60713677 -142371855 + L2 LINE L2 3192 3313 0 293 300 20 20 chr5 60713832 60713932 -142371600 - MIR3 SINE MIR -46 162 63 365 344 34 18 chr5 60715169 60715553 -142369979 - L1MC4a LINE L1 -1810 5998 5609 1801 176 58 39 chr5 60715596 60715959 -142369573 - MLT1A2 LTR MaLR 0 374 5 1970 264 58 17 chr5 60716058 60716923 -142368609 + L1MEd LINE L1 2093 3032 -3097 309 280 102 59 chr5 60717063 60717249 -142368283 - LTR67 LTR ERVL -265 292 99 329 282 73 8 chr5 60717831 60717955 -142367577 - LTR67 LTR ERVL -2 555 424 195 129 0 0 chr5 60718005 60718036 -142367496 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2295 111 0 3 chr5 60718465 60718771 -142366761 + AluSx SINE Alu 1 305 -7 24 0 0 0 chr5 60718771 60718795 -142366737 + AT_rich Low_complexity Low_complexity 1 24 0 297 285 46 15 chr5 60718795 60718925 -142366607 - L1MC/D LINE L1 -1959 5849 5716 436 274 18 0 chr5 60719166 60719279 -142366253 + MIR3 SINE MIR 60 174 -34 352 242 266 0 chr5 60719968 60720092 -142365440 + MIR SINE MIR 49 205 -57 269 380 33 0 chr5 60721074 60721166 -142364366 + L2 LINE L2 3200 3294 -19 241 239 0 0 chr5 60721126 60721172 -142364360 + MIR SINE MIR 210 255 -7 * 398 258 56 66 chr5 60721182 60721380 -142364152 - MLT1L LTR MaLR 0 615 420 431 160 35 132 chr5 60721380 60721524 -142364008 + L2 LINE L2 2679 2808 -506 913 189 9 60 chr5 60721536 60721753 -142363779 + L2 LINE L2 3108 3313 0 370 275 137 60 chr5 60721757 60721990 -142363542 - MLT1L LTR MaLR -161 454 204 416 299 47 24 chr5 60722844 60722971 -142362561 + L2 LINE L2 3143 3272 0 251 292 88 44 chr5 60724218 60724331 -142361201 - MIR SINE MIR -77 185 68 1728 212 28 51 chr5 60724766 60725237 -142360295 + MLT1C LTR MaLR 1 460 -7 774 180 8 0 chr5 60725329 60725451 -142360081 - FRAM SINE Alu -14 162 40 195 42 0 0 chr5 60725465 60725489 -142360043 + (TG)n Simple_repeat Simple_repeat 1 24 0 565 218 21 28 chr5 60726119 60726261 -142359271 - MER58B DNA MER1_type -10 331 191 1955 221 94 36 chr5 60726269 60726874 -142358658 - MLT1E1 LTR MaLR -14 640 1 944 230 15 5 chr5 60726874 60727070 -142358462 - MER58B DNA MER1_type -143 198 1 305 386 51 11 chr5 60727845 60728021 -142357511 - MIR3 SINE MIR -11 197 15 1829 105 0 20 chr5 60730096 60730377 -142355155 - AluSx SINE Alu 0 315 40 652 128 8 8 chr5 60731966 60732091 -142353441 + (TTCC)n Simple_repeat Simple_repeat 2 126 0 230 200 22 0 chr5 60732133 60732178 -142353354 - L2 LINE L2 -1 3312 3267 233 274 0 14 chr5 60732450 60732523 -142353009 + MLT1L LTR MaLR 467 538 -77 965 217 66 9 chr5 60732608 60732820 -142352712 + MER58A DNA MER1_type 1 224 0 328 278 146 13 chr5 60734819 60734970 -142350562 + MIR SINE MIR 89 259 -3 704 273 55 49 chr5 60735129 60735204 -142350328 - L1ME LINE L1 -362 5759 5686 2283 105 10 0 chr5 60735204 60735509 -142350023 + AluSq SINE Alu 1 308 -5 704 273 55 49 chr5 60735509 60735799 -142349733 - L1ME LINE L1 -435 5686 5392 270 324 10 20 chr5 60736164 60736266 -142349266 - L2 LINE L2 -14 3299 3199 * 363 324 130 5 chr5 60736265 60736481 -142349051 - MIR SINE MIR -13 249 7 1436 164 45 35 chr5 60736505 60736557 -142348975 - Tigger6a DNA MER2_type -514 1083 1033 1902 148 0 11 chr5 60736557 60736840 -142348692 + AluJb SINE Alu 1 280 -32 269 26 0 26 chr5 60736842 60736881 -142348651 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1436 164 45 35 chr5 60736881 60737137 -142348395 - Tigger6a DNA MER2_type -564 1033 769 1599 216 92 25 chr5 60737197 60737641 -142347891 - MER74B LTR ERVL -93 529 56 3273 177 34 61 chr5 60737649 60738424 -142347108 - Tigger6a DNA MER2_type -306 777 24 207 179 0 75 chr5 60739015 60739082 -142346450 + (TATG)n Simple_repeat Simple_repeat 1 62 0 971 286 94 11 chr5 60739278 60739641 -142345891 - LTR16C LTR ERVL 0 491 99 573 225 80 0 chr5 60739728 60739879 -142345653 - MIR SINE MIR -16 246 84 269 263 25 0 chr5 60740729 60740809 -142344723 + (TA)n Simple_repeat Simple_repeat 1 82 0 273 301 228 0 chr5 60741137 60741273 -142344259 - MIR3 SINE MIR -16 192 26 760 279 67 4 chr5 60742495 60742735 -142342797 - MIR SINE MIR -6 256 2 379 242 71 50 chr5 60742796 60742994 -142342538 - L2 LINE L2 0 3313 3112 399 303 64 32 chr5 60743055 60743306 -142342226 - LTR16C LTR ERVL -36 455 197 392 304 97 10 chr5 60743531 60743820 -142341712 - L2 LINE L2 -258 3055 2739 2099 111 0 0 chr5 60744167 60744458 -142341074 - AluSg SINE Alu 0 301 11 499 279 132 11 chr5 60744916 60745106 -142340426 - MLT1J2 LTR MaLR -34 416 204 2317 112 0 13 chr5 60745447 60745581 -142339951 + AluSx SINE Alu 3 137 -175 2482 75 0 13 chr5 60745581 60745888 -142339644 + AluY SINE Alu 1 303 -8 2317 112 0 13 chr5 60745888 60746067 -142339465 + AluSx SINE Alu 137 312 0 624 158 53 0 chr5 60746239 60746353 -142339179 - L1MB2 LINE L1 -3 6168 6049 2574 158 36 2 chr5 60746522 60746971 -142338561 - L1MB2 LINE L1 -1 6170 5707 234 91 0 0 chr5 60747035 60747068 -142338464 + (TG)n Simple_repeat Simple_repeat 1 33 0 693 189 91 0 chr5 60748234 60748377 -142337155 - MER34 LTR ERV1 -3 539 384 1118 30 8 0 chr5 60748377 60748511 -142337021 - L1PA4 LINE L1 -298 5857 5723 1996 58 109 4 chr5 60748511 60748784 -142336748 + L1PA4 LINE L1 5852 6155 0 1340 224 132 11 chr5 60748788 60749136 -142336396 - MER34 LTR ERV1 -142 400 11 1830 96 0 0 chr5 60750378 60750627 -142334905 + AluY SINE Alu 50 298 -13 431 294 118 13 chr5 60751053 60751281 -142334251 + MIR SINE MIR 1 252 -10 27 87 0 0 chr5 60751287 60751356 -142334176 + AT_rich Low_complexity Low_complexity 1 69 0 218 188 0 77 chr5 60751356 60751451 -142334081 + (TAA)n Simple_repeat Simple_repeat 1 87 -21 1890 155 18 0 chr5 60751451 60751735 -142333797 + AluSx SINE Alu 1 289 -23 218 188 0 77 chr5 60751735 60751756 -142333776 + (TAA)n Simple_repeat Simple_repeat 87 108 0 1678 206 19 32 chr5 60752234 60752613 -142332919 - MLT1A2 LTR MaLR 0 374 1 33 43 0 0 chr5 60752964 60753011 -142332521 + GC_rich Low_complexity Low_complexity 1 47 0 1940 126 0 0 chr5 60754474 60754744 -142330788 - AluSx SINE Alu -13 299 30 5001 103 61 33 chr5 60754807 60755649 -142329883 + L1PA16 LINE L1 5293 6157 -9 21 0 0 0 chr5 60755649 60755670 -142329862 + AT_rich Low_complexity Low_complexity 1 21 0 1881 139 14 76 chr5 60756640 60757007 -142328525 + L1MB5 LINE L1 5545 5888 -286 185 206 0 16 chr5 60757013 60757076 -142328456 + (ATG)n Simple_repeat Simple_repeat 1 62 0 662 298 14 19 chr5 60757374 60757589 -142327943 - MIR SINE MIR -16 246 33 209 224 20 0 chr5 60758234 60758283 -142327249 - MIR SINE MIR -59 149 100 2587 98 35 19 chr5 60758651 60759020 -142326512 - THE1C LTR MaLR 0 375 1 365 220 33 0 chr5 60759083 60759174 -142326358 - MIR SINE MIR -62 200 107 4273 138 53 65 chr5 60759458 60760773 -142324759 + pTR5 LTR ERV1 743 2606 0 816 265 27 0 chr5 60760886 60761105 -142324427 + MIR SINE MIR 13 237 -25 490 289 108 15 chr5 60761213 60761417 -142324115 - MIR SINE MIR -11 251 29 22 56 0 0 chr5 60761491 60761527 -142324005 + AT_rich Low_complexity Low_complexity 1 36 0 416 307 133 0 chr5 60761912 60762078 -142323454 - MIR SINE MIR -19 243 56 221 279 0 70 chr5 60762579 60762665 -142322867 - L2 LINE L2 0 3272 3193 261 330 52 62 chr5 60763779 60763973 -142321559 + MLT1L LTR MaLR 21 212 -403 2422 179 24 18 chr5 60764006 60764463 -142321069 - MER66B LTR ERV1 0 486 27 234 239 100 77 chr5 60764487 60764617 -142320915 + MLT1L LTR MaLR 262 394 -221 309 233 105 23 chr5 60767049 60767182 -142318350 + L1MC4a LINE L1 5256 5399 -2409 528 264 43 6 chr5 60767274 60767437 -142318095 + L1ME3A LINE L1 6002 6170 0 238 287 74 28 chr5 60767426 60767534 -142317998 + L1MC4a LINE L1 5420 5532 -2276 * 1354 251 72 40 chr5 60767534 60768103 -142317429 + L1MC4a LINE L1 5474 6060 -1748 2222 100 17 0 chr5 60769337 60769626 -142315906 + AluSg SINE Alu 1 294 -16 4765 122 130 78 chr5 60769748 60771053 -142314479 - pTR5 LTR ERV1 0 2438 745 601 255 138 21 chr5 60771053 60771292 -142314240 - MLT1I LTR MaLR -31 378 112 229 274 14 14 chr5 60771516 60771589 -142313943 - MIR3 SINE MIR -49 159 87 358 238 89 0 chr5 60772558 60772659 -142312873 - MER69 DNA AcHobo -10 2516 2407 874 239 0 5 chr5 60772735 60772919 -142312613 - MER69 DNA AcHobo -2320 206 24 22 0 0 0 chr5 60773024 60773046 -142312486 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 60773084 60773111 -142312421 + (T)n Simple_repeat Simple_repeat 1 27 0 221 320 12 15 chr5 60774883 60775006 -142310526 + MIR SINE MIR 25 130 -78 1765 182 48 24 chr5 60775865 60776244 -142309288 - MLT1B LTR MaLR -2 388 1 23 0 0 0 chr5 60777125 60777148 -142308384 + AT_rich Low_complexity Low_complexity 1 23 0 305 317 130 0 chr5 60777177 60777300 -142308232 - MER117 DNA MER1_type -4 193 55 2046 88 0 27 chr5 60777331 60777593 -142307939 + AluSc SINE Alu 36 290 -19 697 267 112 0 chr5 60777622 60777854 -142307678 - MIR SINE MIR -3 259 2 349 303 45 41 chr5 60777864 60778085 -142307447 + L3 LINE CR1 1306 1527 -50 2281 91 0 20 chr5 60778915 60779213 -142306319 - AluSg SINE Alu -18 292 1 180 303 9 83 chr5 60779301 60779410 -142306122 + MIR SINE MIR 52 152 -110 456 170 28 47 chr5 60780058 60780164 -142305368 - MIR SINE MIR -43 219 116 436 273 56 27 chr5 60781514 60781617 -142303915 + MLT1L LTR MaLR 221 320 -295 216 0 0 0 chr5 60781617 60781641 -142303891 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 436 273 56 27 chr5 60781641 60781885 -142303647 + MLT1L LTR MaLR 320 610 -5 1565 228 59 66 chr5 60783042 60783603 -142301929 - LTR67 LTR ERVL 0 557 1 21 71 0 0 chr5 60783707 60783749 -142301783 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr5 60784011 60784031 -142301501 + (A)n Simple_repeat Simple_repeat 1 20 0 288 0 0 0 chr5 60784031 60784063 -142301469 + (TA)n Simple_repeat Simple_repeat 2 33 0 210 156 0 0 chr5 60785067 60785112 -142300420 + (CA)n Simple_repeat Simple_repeat 1 45 0 934 239 18 9 chr5 60785193 60785419 -142300113 + MIR SINE MIR 34 261 -1 239 281 250 6 chr5 60785521 60785685 -142299847 - MIR SINE MIR -56 206 3 457 241 178 29 chr5 60785728 60785969 -142299563 - MARNA DNA Mariner -162 424 148 2446 161 26 2 chr5 60786107 60786529 -142299003 + MSTB1 LTR MaLR 1 432 0 184 235 62 12 chr5 60786766 60786847 -142298685 - MIR SINE MIR -118 144 60 763 234 35 72 chr5 60788763 60789053 -142296479 + MLT2C1 LTR ERVL 119 397 0 * 1486 237 40 16 chr5 60789053 60789478 -142296054 + LTR16A LTR ERVL 16 450 0 186 43 0 0 chr5 60789654 60789677 -142295855 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 346 329 154 33 chr5 60789689 60790239 -142295293 + L2 LINE L2 1774 2390 -924 280 91 0 36 chr5 60790331 60790386 -142295146 + (TC)n Simple_repeat Simple_repeat 1 53 0 907 346 20 15 chr5 60790543 60790942 -142294590 + MER115 DNA AcHobo 40 440 -253 227 333 87 59 chr5 60791006 60791327 -142294205 - L2 LINE L2 -21 3251 2922 374 328 52 17 chr5 60791830 60792029 -142293503 + MIR SINE MIR 3 205 -57 2288 101 0 0 chr5 60793602 60793898 -142291634 + AluSg SINE Alu 1 296 -14 298 325 91 0 chr5 60794008 60794162 -142291370 - MIR SINE MIR -76 186 19 207 0 0 0 chr5 60795309 60795332 -142290200 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 457 241 161 6 chr5 60795379 60795541 -142289991 + MIR SINE MIR 3 189 -73 206 265 248 0 chr5 60797462 60797579 -142287953 - MER5A DNA MER1_type -18 171 26 275 296 86 0 chr5 60797660 60797741 -142287791 - L2 LINE L2 -49 3223 3136 887 156 202 23 chr5 60798010 60798228 -142287304 - LTR37B LTR ERV1 -14 454 198 409 301 72 6 chr5 60798536 60798702 -142286830 - MIR SINE MIR -38 224 48 219 88 0 0 chr5 60798992 60799026 -142286506 + (CAGGG)n Simple_repeat Simple_repeat 2 35 0 418 269 8 25 chr5 60799393 60799512 -142286020 + MER5A DNA MER1_type 44 160 -29 1973 139 3 3 chr5 60799589 60799877 -142285655 - AluJb SINE Alu -19 293 6 413 209 209 0 chr5 60800016 60800150 -142285382 - MER5A DNA MER1_type 0 189 28 2022 197 66 9 chr5 60800223 60800649 -142284883 - MLT1D LTR MaLR 0 505 56 557 149 0 0 chr5 60800649 60800736 -142284796 + L1P5 LINE L1 5705 5791 -360 319 294 0 0 chr5 60800736 60800821 -142284711 - L1MC4 LINE L1 -1344 6698 6614 307 232 0 53 chr5 60800769 60800864 -142284668 + L1MC4 LINE L1 6614 6703 -1339 * 2763 87 0 3 chr5 60800923 60801293 -142284239 + L1PB1 LINE L1 5783 6151 0 253 129 97 113 chr5 60801298 60801360 -142284172 - MLT1D LTR MaLR -444 61 1 579 318 50 32 chr5 60802623 60803066 -142282466 + L2 LINE L2 2804 3254 -59 205 219 82 27 chr5 60804665 60804738 -142280794 + L2 LINE L2 3196 3272 0 243 217 25 124 chr5 60805007 60805025 -142280507 + MIR3 SINE MIR 79 97 -111 1184 177 5 5 chr5 60805025 60805234 -142280298 - MER3 DNA MER1_type 0 209 1 243 217 25 124 chr5 60805234 60805321 -142280211 + MIR3 SINE MIR 97 187 -21 297 333 62 11 chr5 60805694 60805871 -142279661 + MIR3 SINE MIR 17 202 -6 432 309 101 24 chr5 60806782 60806989 -142278543 - MIR SINE MIR -19 243 21 1264 177 27 0 chr5 60807073 60807293 -142278239 - MLT1D LTR MaLR 0 505 280 581 215 0 0 chr5 60807283 60807390 -142278142 - MLT1D LTR MaLR -398 107 1 * 2476 81 3 0 chr5 60808339 60808649 -142276883 - AluSp SINE Alu -2 311 1 325 307 18 9 chr5 60809360 60809474 -142276058 + MIR SINE MIR 88 202 -60 25 75 0 0 chr5 60809882 60809935 -142275597 + AT_rich Low_complexity Low_complexity 1 53 0 308 267 20 0 chr5 60809950 60810051 -142275481 + (TA)n Simple_repeat Simple_repeat 1 103 0 455 271 42 21 chr5 60810851 60810995 -142274537 + MIR3 SINE MIR 17 163 -45 1829 201 122 55 chr5 60811151 60811734 -142273798 + MLT1E3 LTR MaLR 3 624 0 428 257 55 14 chr5 60812517 60812660 -142272872 + MIR SINE MIR 19 170 -74 1685 170 28 7 chr5 60813143 60813426 -142272106 + AluJb SINE Alu 1 289 -23 2294 88 0 17 chr5 60813435 60813732 -142271800 + AluSq SINE Alu 1 292 -21 180 229 21 21 chr5 60814120 60814168 -142271364 + MIR SINE MIR 87 134 -74 254 206 397 0 chr5 60814286 60814412 -142271120 - MER5A DNA MER1_type -1 188 13 1221 198 66 66 chr5 60814504 60814608 -142270924 + L1MB7 LINE L1 5822 5925 -259 2527 4 0 0 chr5 60814608 60814875 -142270657 - AluYa5 SINE Alu -5 306 40 1221 198 66 66 chr5 60814875 60815133 -142270399 + L1MB7 LINE L1 5924 6184 0 898 182 29 0 chr5 60815647 60815817 -142269715 + MER5A DNA MER1_type 14 188 -1 225 0 0 0 chr5 60815841 60815866 -142269666 + (CA)n Simple_repeat Simple_repeat 1 25 0 292 309 0 0 chr5 60815931 60816025 -142269507 - MER117 DNA MER1_type -4 193 100 364 326 48 20 chr5 60817105 60817252 -142268280 - MIR3 SINE MIR -39 169 19 450 0 0 0 chr5 60818071 60818121 -142267411 + (TG)n Simple_repeat Simple_repeat 1 50 0 225 0 0 0 chr5 60818120 60818145 -142267387 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 23 0 0 0 chr5 60818403 60818426 -142267106 + AT_rich Low_complexity Low_complexity 1 23 0 278 330 10 0 chr5 60819294 60819391 -142266141 - MIR3 SINE MIR -1 207 110 195 114 0 0 chr5 60819524 60819559 -142265973 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 473 280 60 13 chr5 60819579 60819729 -142265803 + MIR SINE MIR 1 157 -105 340 240 93 23 chr5 60819984 60820113 -142265419 + MLT1L LTR MaLR 135 272 -343 431 313 157 8 chr5 60820141 60820390 -142265142 + MLT1L LTR MaLR 330 615 0 364 209 70 52 chr5 60821537 60821652 -142263880 + MER5B DNA MER1_type 5 121 -57 250 288 42 0 chr5 60821758 60821843 -142263689 + MIR SINE MIR 60 153 -63 381 281 129 24 chr5 60822428 60822638 -142262894 - MIR SINE MIR 0 262 31 22 0 0 0 chr5 60822700 60822722 -142262810 + AT_rich Low_complexity Low_complexity 1 22 0 735 187 15 0 chr5 60822756 60822890 -142262642 + MER47A DNA MER2_type 41 176 -190 210 143 0 0 chr5 60822890 60822925 -142262607 + (A)n Simple_repeat Simple_repeat 1 35 0 434 302 28 28 chr5 60823720 60823899 -142261633 - MIR3 SINE MIR -27 181 3 893 266 75 33 chr5 60827152 60827484 -142258048 + L1ME4a LINE L1 5543 5901 -220 2379 95 0 3 chr5 60827484 60827788 -142257744 + AluSg SINE Alu 1 303 -7 893 266 75 33 chr5 60827788 60827910 -142257622 + L1ME4a LINE L1 5901 6016 -105 1315 81 106 205 chr5 60828639 60828961 -142256571 + AluSx SINE Alu 5 294 -8 364 250 125 0 chr5 60834134 60834254 -142251278 + MIR SINE MIR 1 135 -127 216 267 0 17 chr5 60834365 60834425 -142251107 + MIR SINE MIR 204 262 0 438 326 6 66 chr5 60834688 60834824 -142250708 + MIR3 SINE MIR 30 154 -54 985 201 0 46 chr5 60834824 60835043 -142250489 + MER3 DNA MER1_type 1 209 0 438 326 6 66 chr5 60835043 60835087 -142250445 + MIR3 SINE MIR 154 199 -9 557 306 32 0 chr5 60835348 60835534 -142249998 - MIR SINE MIR -39 223 32 547 244 88 44 chr5 60835550 60835755 -142249777 - L1ME3A LINE L1 -9 6161 5948 471 283 9 0 chr5 60835902 60836015 -142249517 - L2 LINE L2 0 3313 3200 1418 267 120 17 chr5 60837832 60838347 -142247185 - L2 LINE L2 0 3313 2742 447 227 86 29 chr5 60839684 60839829 -142245703 + MIR SINE MIR 40 191 -71 2276 96 7 0 chr5 60839833 60840126 -142245406 + AluSg SINE Alu 1 295 -15 1330 274 94 11 chr5 60840731 60841252 -142244280 + L1ME4a LINE L1 5293 5856 -265 735 286 65 33 chr5 60841941 60842186 -142243346 + MIR SINE MIR 8 260 -2 1154 246 122 25 chr5 60842227 60842679 -142242853 - MLT1F1 LTR MaLR -78 489 1 2559 123 65 4 chr5 60842891 60843318 -142242214 + MER1A DNA MER1_type 2 529 0 216 0 0 0 chr5 60843716 60843740 -142241792 + (A)n Simple_repeat Simple_repeat 1 24 0 255 164 211 39 chr5 60843883 60843987 -142241545 + L1M4 LINE L1 4519 4640 -1506 1449 142 98 33 chr5 60843994 60844269 -142241263 - MSTA LTR MaLR 0 428 136 722 183 85 107 chr5 60894304 60894433 -142191099 - L1ME LINE L1 -434 5732 5609 2783 159 20 12 chr5 60894433 60894924 -142190608 - L1MB2 LINE L1 -1 6170 5676 722 183 85 107 chr5 60894924 60895018 -142190514 - L1ME LINE L1 -557 5609 5514 1733 62 106 15 chr5 60895018 60895357 -142190175 + SVA Other Other 1 370 -1016 284 301 36 0 chr5 60895508 60895591 -142189941 - MER5B DNA MER1_type -50 128 43 914 237 47 19 chr5 60895593 60895808 -142189724 + AluJo SINE Alu 1 221 -91 271 98 0 59 chr5 60895808 60895859 -142189673 + FLAM_A SINE Alu 86 133 0 186 43 0 0 chr5 60895881 60895904 -142189628 + (CA)n Simple_repeat Simple_repeat 2 24 0 1936 148 0 7 chr5 60895924 60896215 -142189317 - AluSx SINE Alu -23 289 1 200 191 0 143 chr5 60896223 60896286 -142189246 + MER5B DNA MER1_type 124 177 -1 215 269 0 0 chr5 60896391 60896443 -142189089 - L2 LINE L2 0 3313 3262 1188 156 39 15 chr5 60897000 60897205 -142188327 - AluJo SINE Alu -102 210 1 257 310 132 88 chr5 60897296 60897728 -142187804 + L2 LINE L2 2814 3264 -8 5997 174 25 25 chr5 60897816 60898567 -142186965 - L1MC1 LINE L1 -9 6324 5571 2403 107 0 0 chr5 60898567 60898875 -142186657 + AluSg SINE Alu 1 308 -2 5997 174 25 25 chr5 60898875 60899438 -142186094 - L1MC1 LINE L1 -762 5571 5009 2271 245 28 35 chr5 60900062 60900082 -142185450 - L1MC1 LINE L1 -1100 5046 5027 1629 165 7 11 chr5 60900082 60900354 -142185178 - AluJb SINE Alu -41 271 1 2271 245 28 35 chr5 60900354 60901323 -142184209 - L1MC1 LINE L1 -1119 5027 4100 1941 130 10 3 chr5 60901326 60901618 -142183914 + AluSx SINE Alu 3 296 -16 2350 99 0 0 chr5 60902730 60903032 -142182500 - AluSg SINE Alu -8 302 1 186 43 0 0 chr5 60904927 60904950 -142180582 + (GA)n Simple_repeat Simple_repeat 1 23 0 515 271 147 23 chr5 60905368 60905586 -142179946 - L3 LINE CR1 -73 1504 1260 5194 163 29 11 chr5 60905586 60906104 -142179428 + L1MB3 LINE L1 4372 4879 -1304 1515 213 71 31 chr5 60906104 60906485 -142179047 + MSTD LTR MaLR 1 396 0 5194 163 29 11 chr5 60906485 60907739 -142177793 + L1MB3 LINE L1 4879 6173 -10 1058 56 0 0 chr5 60907739 60907865 -142177667 - AluY SINE Alu -12 299 174 554 309 124 16 chr5 60907886 60908249 -142177283 - L3 LINE CR1 -308 1269 868 2263 144 35 0 chr5 60908301 60908676 -142176856 + L1 LINE L1 4706 5093 -1053 342 288 102 58 chr5 60908864 60909090 -142176442 - MLT1K LTR MaLR -342 246 11 6389 54 32 4 chr5 60909142 60909901 -142175631 - LTR17 LTR ERV1 0 780 1 424 274 100 121 chr5 60909908 60910298 -142175234 - L3 LINE CR1 -751 826 445 481 173 70 177 chr5 60910472 60910612 -142174920 - MIR SINE MIR -27 235 129 1731 142 52 4 chr5 60910612 60910904 -142174628 + AluJb SINE Alu 1 305 0 481 173 70 177 chr5 60910904 60911005 -142174527 - MIR SINE MIR -133 129 19 2405 90 0 6 chr5 60911371 60911683 -142173849 - AluSp SINE Alu 0 313 4 2247 107 0 7 chr5 60911822 60912132 -142173400 - AluSx SINE Alu -4 308 1 2047 142 14 0 chr5 60912160 60912455 -142173077 - AluJo SINE Alu -13 299 1 759 286 94 24 chr5 60912579 60912992 -142172540 - LTR33 LTR ERVL -38 483 42 2402 205 52 14 chr5 60913840 60914768 -142170764 + L1MDa LINE L1 3 1436 -5104 445 175 0 0 chr5 60914878 60914941 -142170591 - AluJ/FLAM SINE Alu -248 64 2 3095 228 50 82 chr5 60914942 60915175 -142170357 + L1M4 LINE L1 3544 3783 -2363 2140 115 3 16 chr5 60915175 60915480 -142170052 + AluSx SINE Alu 1 301 -11 3095 228 50 82 chr5 60915480 60915892 -142169640 + L1M4 LINE L1 3783 4207 -1939 1782 115 19 8 chr5 60915892 60916152 -142169380 - AluSq SINE Alu -50 263 1 3095 228 50 82 chr5 60916152 60916752 -142168780 + L1M4 LINE L1 4207 4751 -1395 1780 175 136 16 chr5 60916752 60917134 -142168398 + MSTC LTR MaLR 1 428 0 3095 228 50 82 chr5 60917134 60917150 -142168382 + L1M4 LINE L1 4751 4766 -1380 271 310 0 0 chr5 60917157 60917228 -142168304 + MIR SINE MIR 192 262 0 317 336 35 9 chr5 60917281 60917394 -142168138 - MIR3 SINE MIR -78 130 15 564 304 117 30 chr5 60917761 60918222 -142167310 - L1ME2 LINE L1 -226 5938 5438 352 288 108 6 chr5 60918241 60918585 -142166947 - L1ME2 LINE L1 -1537 4609 4231 961 189 6 6 chr5 60918716 60918880 -142166652 + FRAM SINE Alu 1 164 -2 271 368 53 0 chr5 60918943 60919038 -142166494 - L2 LINE L2 -39 3233 3134 2227 86 17 10 chr5 60919285 60919575 -142165957 - AluSx SINE Alu -20 292 1 1015 209 34 34 chr5 60919900 60920135 -142165397 + MIR SINE MIR 28 262 0 558 309 98 5 chr5 60920227 60920431 -142165101 - MIR SINE MIR 0 262 40 333 286 98 30 chr5 60920556 60920689 -142164843 - MER5A DNA MER1_type -1 188 47 918 161 36 52 chr5 60920690 60920882 -142164650 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 60920997 60921030 -142164502 + AT_rich Low_complexity Low_complexity 1 33 0 2183 81 53 0 chr5 60922131 60922416 -142163116 - AluSp SINE Alu -13 300 1 2390 48 0 17 chr5 60922629 60922946 -142162586 + AluY SINE Alu 1 311 0 2477 49 0 3 chr5 60923451 60923737 -142161795 + AluY SINE Alu 11 295 -16 450 127 113 0 chr5 60923737 60923808 -142161724 + AluJb SINE Alu 43 121 -191 24 0 0 0 chr5 60924171 60924195 -142161337 + AT_rich Low_complexity Low_complexity 1 24 0 1003 202 67 32 chr5 60925339 60925565 -142159967 + MIR SINE MIR 1 238 -24 4685 93 11 6 chr5 60925565 60926191 -142159341 + L1PA11 LINE L1 5546 6174 0 1003 202 67 32 chr5 60926191 60926217 -142159315 + MIR SINE MIR 238 262 0 25 31 0 0 chr5 60926828 60926860 -142158672 + AT_rich Low_complexity Low_complexity 1 32 0 2285 110 15 78 chr5 60927026 60927214 -142158318 + THE1C LTR MaLR 1 152 -223 7540 31 14 0 chr5 60927214 60928384 -142157148 - L1PA4 LINE L1 -3 6152 4961 2285 110 15 78 chr5 60928384 60928595 -142156937 + THE1C LTR MaLR 152 375 0 681 274 127 65 chr5 60928813 60928916 -142156616 + L3 LINE CR1 1192 1287 -290 2188 134 3 0 chr5 60928916 60929223 -142156309 - AluSx SINE Alu -2 310 3 681 274 127 65 chr5 60929223 60929473 -142156059 + L3 LINE CR1 1287 1567 -10 1773 159 3 28 chr5 60929823 60930143 -142155389 - AluJb SINE Alu 0 312 1 6846 142 50 33 chr5 60931289 60932280 -142153252 - Tigger3b DNA MER2_type -1798 1230 258 261 0 0 0 chr5 60932280 60932309 -142153223 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2037 108 7 0 chr5 60932311 60932589 -142152943 - AluSx SINE Alu -32 280 1 6846 142 50 33 chr5 60932589 60932803 -142152729 - Tigger3b DNA MER2_type -2770 258 1 1485 257 3 112 chr5 60932823 60933161 -142152371 - AluSx SINE Alu -1 301 1 1604 169 11 4 chr5 60933177 60933449 -142152083 - AluJo SINE Alu -38 274 1 1853 137 0 18 chr5 60933479 60933756 -142151776 + AluJo SINE Alu 11 282 -30 387 0 0 0 chr5 60933759 60933802 -142151730 + (CAA)n Simple_repeat Simple_repeat 2 44 0 296 208 83 14 chr5 60934228 60934300 -142151232 + L3 LINE CR1 1493 1569 -8 2307 71 0 3 chr5 60934872 60935180 -142150352 + AluY SINE Alu 1 307 0 1684 153 27 17 chr5 60935381 60935676 -142149856 + AluJo SINE Alu 2 299 -13 474 243 104 107 chr5 60935821 60936101 -142149431 - L1MC4 LINE L1 -17 8025 7648 1303 140 5 28 chr5 60936101 60936315 -142149217 + AluJb SINE Alu 85 293 -19 2237 107 17 0 chr5 60936348 60936647 -142148885 + AluJb SINE Alu 1 304 -8 1076 93 0 0 chr5 60936931 60937071 -142148461 - AluSp/q SINE Alu -2 311 172 2067 132 3 0 chr5 60937951 60938239 -142147293 - AluSx SINE Alu -23 289 1 2141 90 17 10 chr5 60938821 60939121 -142146411 + AluSq SINE Alu 1 302 -11 515 328 123 26 chr5 60939806 60940351 -142145181 + L2 LINE L2 1404 2001 -1313 1980 139 10 23 chr5 60940360 60940669 -142144863 + AluJb SINE Alu 1 305 -7 1819 149 6 67 chr5 60940812 60941140 -142144392 - AluJb SINE Alu -4 308 1 462 325 34 21 chr5 60941141 60941378 -142144154 + L2 LINE L2 2308 2547 -767 1110 174 104 14 chr5 60941384 60941596 -142143936 - MER8 DNA MER2_type -1 238 8 2291 97 13 3 chr5 60941649 60941947 -142143585 - AluSx SINE Alu -8 304 4 2079 92 16 29 chr5 60941959 60942275 -142143257 - AluSx SINE Alu 0 312 1 234 342 51 57 chr5 60942292 60942628 -142142904 + L2 LINE L2 2568 2901 -413 2386 59 0 26 chr5 60942652 60942958 -142142574 - AluY SINE Alu -13 298 1 2041 137 0 10 chr5 60943331 60943631 -142141901 - AluSx SINE Alu -13 299 3 2312 47 19 63 chr5 60944811 60945128 -142140404 + AluY SINE Alu 1 303 -8 2276 112 0 10 chr5 60945606 60945909 -142139623 - AluSx SINE Alu -12 300 1 2450 93 0 0 chr5 60945922 60946232 -142139300 - AluSx SINE Alu -2 310 1 2204 99 7 10 chr5 60946260 60946553 -142138979 + AluSx SINE Alu 1 292 -20 2936 6 0 0 chr5 60946824 60947135 -142138397 + AluYa5 SINE Alu 1 311 0 877 133 106 13 chr5 60947145 60947296 -142138236 + FRAM SINE Alu 1 164 -12 2044 142 0 16 chr5 60948646 60948955 -142136577 - AluSq SINE Alu -9 304 1 229 333 13 0 chr5 60949040 60949115 -142136417 - MLT1J2 LTR MaLR -149 301 226 1296 159 60 4 chr5 60949218 60949451 -142136081 + AluJb SINE Alu 65 310 -2 343 126 53 53 chr5 60949460 60949555 -142135977 - MLT1J2 LTR MaLR -332 118 24 422 300 175 18 chr5 60949592 60949815 -142135717 + MIR SINE MIR 2 259 -3 1893 156 10 10 chr5 60949910 60950211 -142135321 - AluJb SINE Alu -11 301 1 206 264 222 0 chr5 60950709 60950781 -142134751 + L2 LINE L2 3201 3288 -25 939 174 56 24 chr5 60950979 60951192 -142134340 + AluJo SINE Alu 91 310 -2 2212 117 3 7 chr5 60951362 60951698 -142133834 + AluSx SINE Alu 1 312 0 1873 167 27 0 chr5 60951873 60952173 -142133359 + AluJb SINE Alu 1 308 -4 1787 158 0 30 chr5 60952481 60952778 -142132754 + AluJo SINE Alu 5 292 -20 255 79 0 0 chr5 60952904 60952942 -142132590 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 3381 120 53 18 chr5 60953600 60954109 -142131423 - MER1A DNA MER1_type 0 527 1 198 0 0 0 chr5 60955248 60955270 -142130262 + (A)n Simple_repeat Simple_repeat 1 22 0 314 180 0 0 chr5 60955323 60955373 -142130159 + Tigger5 DNA MER2_type 1 50 -2273 * 1713 142 11 14 chr5 60955370 60955579 -142129953 + Tigger5 DNA MER2_type 2044 2253 -70 2052 138 3 13 chr5 60955579 60955884 -142129648 + AluJb SINE Alu 1 302 -10 1713 142 11 14 chr5 60955884 60955955 -142129577 + Tigger5 DNA MER2_type 2253 2323 0 724 50 350 0 chr5 60956400 60956520 -142129012 - AluSc SINE Alu -16 293 132 2308 70 35 0 chr5 60956521 60956807 -142128725 - AluY SINE Alu -15 296 1 249 324 0 0 chr5 60956826 60956900 -142128632 + MLT1I LTR MaLR 82 155 -254 431 219 73 0 chr5 60956979 60957075 -142128457 + MLT1I LTR MaLR 307 409 0 2294 94 3 7 chr5 60957405 60957703 -142127829 + AluSx SINE Alu 1 297 -15 182 167 0 0 chr5 60957811 60957841 -142127691 - L2 LINE L2 -23 3290 3261 342 218 97 1 chr5 60959797 60959888 -142125644 + MIR3 SINE MIR 59 157 -51 410 303 65 7 chr5 60959985 60960140 -142125392 - MIR SINE MIR -27 235 72 185 300 10 60 chr5 60960367 60960467 -142125065 - MER5A DNA MER1_type -78 111 17 * 370 258 0 0 chr5 60960380 60960469 -142125063 + MER5A DNA MER1_type 101 189 0 21 0 0 0 chr5 60960772 60960793 -142124739 + AT_rich Low_complexity Low_complexity 1 21 0 2325 95 0 13 chr5 60960882 60961187 -142124345 + AluSx SINE Alu 1 301 -11 583 256 41 6 chr5 60961746 60961918 -142123614 + MER5B DNA MER1_type 1 178 0 515 244 112 46 chr5 60961980 60962177 -142123355 - MER63A DNA MER1_type 0 210 1 529 323 11 5 chr5 60962284 60962470 -142123062 + MIR SINE MIR 28 214 -48 473 268 50 45 chr5 60962936 60963134 -142122398 - MIR SINE MIR -14 248 50 255 61 0 0 chr5 60963435 60963468 -142122064 + (TAA)n Simple_repeat Simple_repeat 1 33 0 369 185 46 44 chr5 60963679 60963796 -142121736 + MIR SINE MIR 33 149 -62 2318 109 0 0 chr5 60963860 60964164 -142121368 - AluSx SINE Alu -8 304 1 225 312 37 9 chr5 60964460 60964569 -142120963 - L2 LINE L2 -495 2819 2708 2393 77 6 26 chr5 60965194 60965505 -142120027 - AluSx SINE Alu -7 305 1 1534 165 27 44 chr5 60965508 60965805 -142119727 + AluJo SINE Alu 12 303 -9 679 221 151 92 chr5 60966287 60966646 -142118886 + MLT1J LTR MaLR 39 430 -81 1940 157 0 10 chr5 60966646 60966946 -142118586 - AluJb SINE Alu -15 297 1 679 221 151 92 chr5 60966946 60967030 -142118502 + MLT1J LTR MaLR 430 508 -3 1100 237 25 85 chr5 60967451 60967530 -142118002 - Charlie8 DNA MER1_type -1930 487 405 2305 85 3 0 chr5 60967530 60967812 -142117720 + AluSg SINE Alu 1 283 -27 378 0 0 0 chr5 60967812 60967854 -142117678 + (CA)n Simple_repeat Simple_repeat 2 43 0 1100 237 25 85 chr5 60967854 60968246 -142117286 - Charlie8 DNA MER1_type -2010 407 43 311 258 16 0 chr5 60968349 60968411 -142117121 - AluS SINE Alu -237 63 1 22 0 0 0 chr5 60968419 60968441 -142117091 + AT_rich Low_complexity Low_complexity 1 22 0 2062 74 16 105 chr5 60968514 60968837 -142116695 + AluSx SINE Alu 2 295 -17 209 33 33 0 chr5 60968847 60968877 -142116655 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1780 177 0 7 chr5 60968888 60969187 -142116345 + AluJo SINE Alu 1 297 -15 192 241 93 0 chr5 60969478 60969532 -142116000 - MER5A DNA MER1_type -68 121 63 806 167 0 15 chr5 60971161 60971293 -142114239 + FLAM_C SINE Alu 4 133 0 1456 201 144 17 chr5 60971917 60972421 -142113111 + Charlie1 DNA MER1_type 5 1877 -884 414 143 33 44 chr5 60972425 60972516 -142113016 + L1MA7 LINE L1 5950 6039 -252 1329 179 0 0 chr5 60972516 60972723 -142112809 - AluSx SINE Alu -105 207 1 293 91 0 18 chr5 60972735 60972790 -142112742 + (TA)n Simple_repeat Simple_repeat 1 54 0 2230 99 3 0 chr5 60972820 60973126 -142112406 + AluSp SINE Alu 1 307 0 2963 174 15 2 chr5 60973128 60973667 -142111865 + Charlie1 DNA MER1_type 1862 2407 -354 1547 179 10 56 chr5 60973676 60973978 -142111554 + AluJo SINE Alu 1 288 -24 228 67 0 0 chr5 60973988 60974018 -142111514 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1218 130 9 166 chr5 60974031 60974088 -142111444 + Charlie1 DNA MER1_type 2398 2462 -299 2147 127 7 10 chr5 60974088 60974395 -142111137 - AluSx SINE Alu -6 306 1 1218 130 9 166 chr5 60974395 60974637 -142110895 + Charlie1 DNA MER1_type 2462 2615 -146 2322 100 0 0 chr5 60974637 60974928 -142110604 - AluSx SINE Alu -21 291 1 1218 130 9 166 chr5 60974928 60975050 -142110482 + Charlie1 DNA MER1_type 2615 2754 -7 30 27 0 0 chr5 60975261 60975298 -142110234 + AT_rich Low_complexity Low_complexity 1 37 0 609 252 66 24 chr5 60975790 60976160 -142109372 - L1MC/D LINE L1 -477 5644 5254 2275 127 0 0 chr5 60976217 60976524 -142109008 - AluSg SINE Alu -3 307 1 2094 148 0 0 chr5 60976633 60976931 -142108601 + AluSx SINE Alu 1 298 -14 3599 195 21 75 chr5 60977007 60977116 -142108416 + L1ME1 LINE L1 5186 5299 -867 2262 89 3 0 chr5 60977116 60977439 -142108093 + AluY SINE Alu 1 324 0 3599 195 21 75 chr5 60977439 60978354 -142107178 + L1ME1 LINE L1 5299 6147 -19 1822 164 3 13 chr5 60978405 60978716 -142106816 + AluJb SINE Alu 1 308 -4 2187 95 28 0 chr5 60978814 60979099 -142106433 - AluSc SINE Alu -16 293 1 2387 76 0 10 chr5 60979390 60979693 -142105839 + AluSg SINE Alu 1 300 -10 2441 78 0 0 chr5 60980148 60980444 -142105088 - AluSc SINE Alu -13 296 1 2088 116 0 27 chr5 60981142 60981443 -142104089 + AluSx SINE Alu 1 293 -19 1941 146 0 0 chr5 60981551 60981826 -142103706 - AluJb SINE Alu -24 288 14 2464 91 0 7 chr5 60983270 60983579 -142101953 - AluSg SINE Alu -3 307 1 2224 112 3 10 chr5 60984043 60984347 -142101185 - AluSq SINE Alu -5 308 7 519 106 0 0 chr5 60984477 60984543 -142100989 + U6 snRNA snRNA 41 106 -1 21 0 0 0 chr5 60984543 60984564 -142100968 + AT_rich Low_complexity Low_complexity 1 21 0 2092 116 3 0 chr5 60984625 60984946 -142100586 + AluSq SINE Alu 1 322 0 234 262 0 0 chr5 60985951 60986035 -142099497 + A-rich Low_complexity Low_complexity 1 84 0 648 264 36 6 chr5 60986430 60986597 -142098935 - MER45 DNA AcHobo -781 172 1 529 276 127 0 chr5 60987418 60987639 -142097893 - MIR SINE MIR -13 249 1 9909 178 53 35 chr5 60988944 60990272 -142095260 + L1MC1 LINE L1 445 1747 -4679 2604 72 0 0 chr5 60990272 60990578 -142094954 + AluSx SINE Alu 4 309 -3 9909 178 53 35 chr5 60990578 60991106 -142094426 + L1MC1 LINE L1 1747 2264 -4162 1970 69 0 46 chr5 60991106 60991367 -142094165 + AluY SINE Alu 54 302 -9 9909 178 53 35 chr5 60991367 60991914 -142093618 + L1MC1 LINE L1 2264 2799 -3627 2367 98 0 0 chr5 60991914 60992209 -142093323 + AluSg SINE Alu 1 295 -15 9909 178 53 35 chr5 60992209 60993051 -142092481 + L1MC1 LINE L1 2799 3778 -2648 2293 93 0 10 chr5 60993051 60993351 -142092181 + AluSx SINE Alu 1 297 -15 9909 178 53 35 chr5 60993351 60993960 -142091572 + L1MC1 LINE L1 3778 4374 -2052 2004 147 10 0 chr5 60993965 60994422 -142091110 - AluSx SINE Alu 0 462 3 3364 212 20 64 chr5 60994425 60995394 -142090138 + L1MC1 LINE L1 4380 5307 -1119 1693 165 4 11 chr5 60995394 60995667 -142089865 + AluJb SINE Alu 1 271 -41 3364 212 20 64 chr5 60995667 60995687 -142089845 + L1MC1 LINE L1 5307 5326 -1100 6060 172 24 25 chr5 60996311 60996873 -142088659 + L1MC1 LINE L1 5289 5850 -763 2418 107 0 0 chr5 60996873 60997181 -142088351 - AluSg SINE Alu -2 308 1 6060 172 24 25 chr5 60997181 60997934 -142087598 + L1MC1 LINE L1 5850 6604 -9 1205 156 39 15 chr5 60998546 60998751 -142086781 + AluJo SINE Alu 1 210 -102 200 269 0 0 chr5 60999308 60999360 -142086172 + L2 LINE L2 3262 3313 0 182 191 0 143 chr5 60999465 60999528 -142086004 - MER5B DNA MER1_type -1 177 124 2018 149 0 0 chr5 60999536 60999825 -142085707 + AluSx SINE Alu 1 289 -23 186 43 0 0 chr5 60999845 60999868 -142085664 + (TG)n Simple_repeat Simple_repeat 2 24 0 268 98 0 59 chr5 60999890 60999941 -142085591 - FLAM_A SINE Alu 0 133 86 835 250 37 14 chr5 60999941 61000157 -142085375 - AluJo SINE Alu -91 221 1 467 281 15 7 chr5 61000159 61000294 -142085238 + MER5B DNA MER1_type 43 178 0 850 204 74 6 chr5 61000337 61000499 -142085033 + MER21B LTR ERV1 327 499 -364 2235 106 0 20 chr5 61000803 61001105 -142084427 + AluSg SINE Alu 1 296 -14 183 277 15 15 chr5 61001156 61001221 -142084311 + MER5A DNA MER1_type 118 182 -7 225 65 0 0 chr5 61002807 61002838 -142082694 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 391 315 45 28 chr5 61002839 61003017 -142082515 - L2 LINE L2 -13 3300 3120 215 240 231 39 chr5 61003155 61003259 -142082273 + L2 LINE L2 3190 3313 0 * 256 286 31 76 chr5 61003255 61003479 -142082053 - L2 LINE L2 -439 2875 2662 198 311 14 0 chr5 61003879 61003953 -142081579 - MIR SINE MIR -36 226 152 1523 253 72 5 chr5 61003964 61004355 -142081177 + MLT1J2 LTR MaLR 16 432 -18 183 268 0 0 chr5 61004378 61004419 -142081113 - MIR SINE MIR -60 148 108 38 0 0 0 chr5 61004762 61004800 -142080732 + AT_rich Low_complexity Low_complexity 1 38 0 406 274 60 0 chr5 61004907 61005024 -142080508 + L2 LINE L2 3190 3313 0 2189 99 20 3 chr5 61005044 61005336 -142080196 - AluSx SINE Alu -15 297 1 475 123 123 12 chr5 61005522 61005603 -142079929 - 5S rRNA rRNA -31 90 1 459 313 50 6 chr5 61005868 61006047 -142079485 - MIR SINE MIR -45 217 31 194 336 127 0 chr5 61006775 61006885 -142078647 + L2 LINE L2 3149 3272 0 180 250 0 0 chr5 61008365 61008409 -142077123 + L2 LINE L2 3269 3312 -1 388 182 81 40 chr5 61008421 61008520 -142077012 - MARNA DNA Mariner -87 499 397 1065 210 69 48 chr5 61008530 61008597 -142076935 + Charlie4a DNA MER1_type 21 85 -1876 2289 94 3 3 chr5 61008597 61008896 -142076636 - AluSg SINE Alu -11 299 1 1065 210 69 48 chr5 61008896 61009162 -142076370 + Charlie4a DNA MER1_type 85 361 -147 1236 183 19 0 chr5 61009162 61009370 -142076162 + AluJb SINE Alu 85 296 -16 2196 121 0 3 chr5 61009372 61009677 -142075855 + AluSx SINE Alu 1 304 -8 227 247 12 0 chr5 61009677 61009758 -142075774 + Charlie4a DNA MER1_type 356 437 -71 851 144 0 0 chr5 61009796 61009914 -142075618 - FLAM_C SINE Alu -25 118 1 243 253 13 27 chr5 61009929 61010004 -142075528 + Charlie4a DNA MER1_type 435 508 0 21 82 0 0 chr5 61010022 61010071 -142075461 + AT_rich Low_complexity Low_complexity 1 49 0 258 247 185 0 chr5 61010096 61010177 -142075355 - MARNA DNA Mariner -226 360 265 205 183 33 17 chr5 61010253 61010287 -142075245 + (TA)n Simple_repeat Simple_repeat 2 39 -23 2175 125 0 0 chr5 61010287 61010582 -142074950 + AluSx SINE Alu 1 295 -17 205 183 33 17 chr5 61010582 61010607 -142074925 + (TA)n Simple_repeat Simple_repeat 39 62 0 279 289 0 0 chr5 61010607 61010697 -142074835 + L1MC4 LINE L1 6614 6703 -1339 269 216 0 69 chr5 61010616 61010718 -142074814 - L1MC4 LINE L1 -1340 6702 6608 * 462 279 43 5 chr5 61011615 61011957 -142073575 + L1ME3 LINE L1 5071 5426 -736 258 32 0 0 chr5 61012006 61012037 -142073495 + (CAA)n Simple_repeat Simple_repeat 2 32 0 551 281 76 45 chr5 61012039 61012301 -142073231 + L1ME3 LINE L1 5557 5809 -353 2297 92 13 0 chr5 61012301 61012606 -142072926 + AluSg SINE Alu 1 309 -1 551 281 76 45 chr5 61012606 61012673 -142072859 + L1ME3 LINE L1 5809 5804 -358 2355 74 40 7 chr5 61012673 61012969 -142072563 + AluY SINE Alu 1 306 -5 551 281 76 45 chr5 61012969 61012998 -142072534 + L1ME3 LINE L1 5803 5830 -332 2321 135 44 95 chr5 61013292 61013328 -142072204 - LTR54 LTR ERV1 -5 505 469 2061 138 0 13 chr5 61013328 61013632 -142071900 - AluSx SINE Alu -12 300 1 2321 135 44 95 chr5 61013632 61013693 -142071839 - LTR54 LTR ERV1 -41 469 406 1468 131 93 62 chr5 61013693 61013983 -142071549 + AluJo SINE Alu 1 299 -13 2321 135 44 95 chr5 61013983 61014389 -142071143 - LTR54 LTR ERV1 -104 406 27 1044 181 5 26 chr5 61014419 61014612 -142070920 + AluSg/x SINE Alu 110 298 -14 352 155 36 0 chr5 61014619 61014703 -142070829 + (CATATA)n Simple_repeat Simple_repeat 1 87 0 458 143 14 0 chr5 61015672 61015742 -142069790 + AluSx SINE Alu 3 73 -240 6274 130 13 15 chr5 61015743 61016714 -142068818 + LTR5 LTR ERVK 1 969 0 1616 129 0 13 chr5 61016715 61016940 -142068592 + AluSx SINE Alu 71 292 -20 1882 152 0 30 chr5 61017432 61017728 -142067804 - AluJo SINE Alu -13 299 13 754 137 8 23 chr5 61017759 61017890 -142067642 - FLAM_A SINE Alu -1 132 4 2292 102 3 0 chr5 61017926 61018221 -142067311 + AluSp SINE Alu 1 296 -17 2293 78 0 3 chr5 61018992 61019285 -142066247 - AluY SINE Alu -19 292 1 933 247 9 5 chr5 61019598 61019821 -142065711 + MIR SINE MIR 8 231 -31 312 282 22 83 chr5 61019858 61020032 -142065500 - MER5A DNA MER1_type -12 166 1 975 216 183 30 chr5 61021020 61021348 -142064184 + LTR33 LTR ERVL 1 378 -143 1839 153 24 20 chr5 61021420 61021715 -142063817 - AluJb SINE Alu -16 296 1 192 315 22 34 chr5 61021978 61022067 -142063465 - MIR SINE MIR -105 103 16 525 227 108 35 chr5 61022339 61022542 -142062990 + MIR SINE MIR 19 236 -26 2124 127 0 19 chr5 61022552 61022866 -142062666 + AluSx SINE Alu 1 308 -4 237 129 32 16 chr5 61024207 61024269 -142061263 + (CAT)n Simple_repeat Simple_repeat 1 63 0 236 269 73 91 chr5 61024272 61024395 -142061137 - MIR SINE MIR -12 250 131 2304 99 3 0 chr5 61024395 61024687 -142060845 + AluSp SINE Alu 2 294 -19 236 269 73 91 chr5 61024687 61024782 -142060750 - MIR SINE MIR -131 131 36 1160 106 6 0 chr5 61024833 61025012 -142060520 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1665 181 0 18 chr5 61025028 61025309 -142060223 - AluJo SINE Alu -36 276 1 2184 146 33 0 chr5 61025873 61026209 -142059323 - MER7A DNA MER2_type 0 346 2 245 152 22 0 chr5 61026308 61026354 -142059178 + MLT1J1 LTR MaLR 396 442 -4 323 315 9 18 chr5 61026851 61026962 -142058570 + MLT1I LTR MaLR 83 192 -217 1919 166 22 9 chr5 61026966 61027450 -142058082 + MER44D DNA MER2_type 3 605 0 794 229 93 38 chr5 61027450 61027608 -142057924 + MLT1J2 LTR MaLR 198 375 -75 2164 125 0 0 chr5 61027608 61027903 -142057629 - AluSx SINE Alu -17 295 1 794 229 93 38 chr5 61027903 61027978 -142057554 + MLT1J2 LTR MaLR 375 444 -6 226 265 129 8 chr5 61028804 61028936 -142056596 + L2 LINE L2 2005 2152 -1162 608 285 34 5 chr5 61028950 61029157 -142056375 + L2 LINE L2 3099 3311 -2 2474 64 0 3 chr5 61030585 61030883 -142054649 + AluY SINE Alu 3 299 -12 191 217 87 58 chr5 61031483 61031552 -142053980 - MIR SINE MIR -110 152 82 2426 147 26 41 chr5 61031554 61031944 -142053588 + MER65C LTR ERV1 1 395 -66 2351 93 0 0 chr5 61031944 61032244 -142053288 - AluSx SINE Alu -12 300 1 2426 147 26 41 chr5 61032244 61032288 -142053244 + MER65C LTR ERV1 395 438 -23 378 0 0 0 chr5 61032288 61032330 -142053202 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 0 0 0 chr5 61032329 61032354 -142053178 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 2426 147 26 41 chr5 61032330 61032354 -142053178 + MER65C LTR ERV1 438 432 -29 1739 92 4 21 chr5 61032354 61032592 -142052940 - AluSp SINE Alu -79 234 1 2426 147 26 41 chr5 61032592 61032623 -142052909 + MER65C LTR ERV1 431 461 0 2176 84 0 0 chr5 61033337 61033600 -142051932 + AluSc SINE Alu 40 302 -7 239 271 0 0 chr5 61033652 61033711 -142051821 - MER5A DNA MER1_type -67 122 64 373 82 0 0 chr5 61033711 61033760 -142051772 - HY4 scRNA scRNA -44 49 1 205 299 0 15 chr5 61033764 61033831 -142051701 - MER5A DNA MER1_type -117 72 7 200 57 0 57 chr5 61036087 61036122 -142049410 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2217 90 17 10 chr5 61036241 61036531 -142049001 + AluSx SINE Alu 1 292 -20 185 413 11 11 chr5 61036595 61036687 -142048845 + L2 LINE L2 2986 3077 -195 240 368 53 0 chr5 61036778 61036873 -142048659 + L2 LINE L2 3134 3233 -39 900 193 6 6 chr5 61036934 61037100 -142048432 - FRAM SINE Alu 0 166 1 329 296 104 6 chr5 61037231 61037576 -142047956 + L1ME2 LINE L1 4231 4609 -1537 532 295 122 35 chr5 61037594 61038055 -142047477 + L1ME2 LINE L1 5438 5938 -226 317 336 35 9 chr5 61038422 61038535 -142046997 + MIR3 SINE MIR 15 130 -78 271 310 0 0 chr5 61038588 61038659 -142046873 - MIR SINE MIR 0 262 192 3152 229 49 82 chr5 61038666 61038682 -142046850 - L1M4 LINE L1 -1380 4766 4751 1780 175 136 16 chr5 61038682 61039064 -142046468 - MSTC LTR MaLR 0 428 1 3152 229 49 82 chr5 61039064 61039664 -142045868 - L1M4 LINE L1 -1395 4751 4133 1675 123 23 11 chr5 61039664 61039924 -142045608 + AluSq SINE Alu 1 263 -50 3152 229 49 82 chr5 61039924 61040336 -142045196 - L1M4 LINE L1 -2013 4133 3783 2106 118 3 16 chr5 61040336 61040641 -142044891 - AluSx SINE Alu -11 301 1 3152 229 49 82 chr5 61040641 61040874 -142044658 - L1M4 LINE L1 -2363 3783 3544 445 175 0 0 chr5 61040875 61040938 -142044594 + AluJ/FLAM SINE Alu 2 64 -248 2402 205 52 14 chr5 61041048 61041976 -142043556 - L1MDa LINE L1 -5104 1436 3 759 286 94 24 chr5 61042825 61043238 -142042294 + LTR33 LTR ERVL 42 483 -38 2047 142 14 0 chr5 61043362 61043657 -142041875 + AluJo SINE Alu 1 299 -13 2247 107 0 7 chr5 61043685 61043995 -142041537 + AluSx SINE Alu 1 308 -4 2440 90 0 3 chr5 61044134 61044445 -142041087 + AluSp SINE Alu 4 313 0 481 173 70 177 chr5 61044808 61044909 -142040623 + MIR SINE MIR 19 82 -180 1730 142 52 4 chr5 61044909 61045201 -142040331 - AluJb SINE Alu 0 305 1 481 173 70 177 chr5 61045201 61045341 -142040191 + MIR SINE MIR 82 235 -27 424 274 100 121 chr5 61045515 61045905 -142039627 + L3 LINE CR1 445 826 -751 6419 54 32 3 chr5 61045912 61046670 -142038862 + LTR17 LTR ERV1 1 780 0 342 288 102 58 chr5 61046722 61046948 -142038584 + MLT1K LTR MaLR 11 246 -342 2284 141 35 0 chr5 61047136 61047511 -142038021 - L1 LINE L1 -1053 5093 4706 569 315 118 16 chr5 61047563 61047928 -142037604 + L3 LINE CR1 868 1269 -308 1058 56 0 0 chr5 61047949 61048075 -142037457 + AluY SINE Alu 174 299 -12 5194 163 29 11 chr5 61048075 61049329 -142036203 - L1MB3 LINE L1 -10 6173 4879 1515 213 71 31 chr5 61049329 61049710 -142035822 - MSTD LTR MaLR 0 396 1 5194 163 29 11 chr5 61049710 61050228 -142035304 - L1MB3 LINE L1 -1304 4879 4372 515 271 147 23 chr5 61050228 61050446 -142035086 + L3 LINE CR1 1260 1504 -73 186 43 0 0 chr5 61050863 61050886 -142034646 + (TC)n Simple_repeat Simple_repeat 1 23 0 2350 99 0 0 chr5 61052782 61053084 -142032448 + AluSg SINE Alu 1 302 -8 2332 92 0 0 chr5 61054196 61054490 -142031042 - AluSx SINE Alu -18 294 1 1015 209 34 34 chr5 61054815 61055050 -142030482 + MIR SINE MIR 28 262 0 558 309 98 5 chr5 61055142 61055346 -142030186 - MIR SINE MIR 0 262 40 333 286 98 30 chr5 61055471 61055604 -142029928 - MER5A DNA MER1_type -1 188 47 918 161 36 52 chr5 61055605 61055797 -142029735 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 61055912 61055945 -142029587 + AT_rich Low_complexity Low_complexity 1 33 0 2183 81 53 0 chr5 61057046 61057331 -142028201 - AluSp SINE Alu -13 300 1 2375 48 0 17 chr5 61057543 61057860 -142027672 + AluY SINE Alu 1 311 0 2477 49 0 3 chr5 61058365 61058651 -142026881 + AluY SINE Alu 11 295 -16 450 127 113 0 chr5 61058651 61058722 -142026810 + AluJb SINE Alu 43 121 -191 24 0 0 0 chr5 61059085 61059109 -142026423 + AT_rich Low_complexity Low_complexity 1 24 0 989 201 68 32 chr5 61060225 61060447 -142025085 + MIR SINE MIR 5 238 -24 4685 93 11 6 chr5 61060447 61061073 -142024459 + L1PA11 LINE L1 5546 6174 0 989 201 68 32 chr5 61061073 61061099 -142024433 + MIR SINE MIR 238 262 0 25 31 0 0 chr5 61061710 61061742 -142023790 + AT_rich Low_complexity Low_complexity 1 32 0 2285 110 15 78 chr5 61061908 61062096 -142023436 + THE1C LTR MaLR 1 152 -223 7570 31 14 0 chr5 61062096 61063265 -142022267 - L1PA4 LINE L1 -3 6152 4961 2285 110 15 78 chr5 61063265 61063476 -142022056 + THE1C LTR MaLR 152 375 0 681 274 127 65 chr5 61063694 61063797 -142021735 + L3 LINE CR1 1192 1287 -290 2231 133 0 0 chr5 61063797 61064105 -142021427 - AluSx SINE Alu -2 310 3 681 274 127 65 chr5 61064105 61064355 -142021177 + L3 LINE CR1 1287 1567 -10 1971 154 0 19 chr5 61064705 61065023 -142020509 - AluJb SINE Alu 0 312 1 620 234 110 92 chr5 61066126 61066169 -142019363 - L1ME4a LINE L1 -179 5942 5901 6846 142 50 33 chr5 61066169 61067160 -142018372 - Tigger3b DNA MER2_type -1798 1230 258 261 0 0 0 chr5 61067160 61067189 -142018343 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2037 108 7 0 chr5 61067191 61067469 -142018063 - AluSx SINE Alu -32 280 1 6846 142 50 33 chr5 61067469 61067683 -142017849 - Tigger3b DNA MER2_type -2770 258 1 1910 147 3 13 chr5 61067689 61067996 -142017536 - AluSx SINE Alu 0 312 9 620 234 110 92 chr5 61067996 61068214 -142017318 - L1ME4a LINE L1 -224 5897 5660 2487 51 3 0 chr5 61068214 61068510 -142017022 - AluY SINE Alu -14 297 1 620 234 110 92 chr5 61068510 61068675 -142016857 - L1ME4a LINE L1 -461 5660 5500 1075 127 0 24 chr5 61068749 61068915 -142016617 - AluSg/x SINE Alu -12 300 139 2387 41 44 0 chr5 61069038 61069332 -142016200 + AluY SINE Alu 1 307 -4 705 311 21 13 chr5 61070092 61070327 -142015205 - MIR SINE MIR -25 237 1 23 33 0 0 chr5 61070737 61070767 -142014765 + AT_rich Low_complexity Low_complexity 1 30 0 288 0 0 0 chr5 61070792 61070824 -142014708 + (CA)n Simple_repeat Simple_repeat 2 33 0 391 356 55 36 chr5 61070828 61071081 -142014451 + L1M4 LINE L1 3696 3953 -2193 773 256 55 35 chr5 61071251 61071505 -142014027 - MIR SINE MIR -2 260 2 2513 128 34 0 chr5 61072616 61072968 -142012564 - THE1B LTR MaLR 0 364 1 368 310 10 0 chr5 61073077 61073177 -142012355 - MIR SINE MIR 0 262 162 236 375 0 0 chr5 61073385 61073465 -142012067 + MIR3 SINE MIR 108 187 -21 453 296 164 0 chr5 61074382 61074571 -142010961 + MIR SINE MIR 28 247 -15 14322 109 27 44 chr5 61074898 61076357 -142009175 + Tigger1 DNA MER2_type 188 1597 -821 2375 72 0 7 chr5 61076357 61076647 -142008885 + AluY SINE Alu 12 299 -12 14322 109 27 44 chr5 61076647 61077456 -142008076 + Tigger1 DNA MER2_type 1597 2418 0 219 203 0 0 chr5 61077520 61077584 -142007948 + GA-rich Low_complexity Low_complexity 1 64 0 507 195 4 70 chr5 61077584 61077724 -142007808 + L1MC4 LINE L1 7880 8025 -7 2331 107 0 0 chr5 61077724 61078034 -142007498 + AluSx SINE Alu 1 310 -2 2012 124 7 0 chr5 61079267 61079573 -142005959 + AluSx SINE Alu 1 308 0 42357 64 4 2 chr5 61080094 61086235 -141999297 + L1PA5 LINE L1 1 6154 0 519 314 114 14 chr5 61086409 61086629 -141998903 + MIR SINE MIR 20 261 -1 1107 218 108 73 chr5 61086799 61087162 -141998370 + MLT1D LTR MaLR 1 451 -116 2199 121 3 0 chr5 61087162 61087459 -141998073 - AluSx SINE Alu -14 298 1 1107 218 108 73 chr5 61087459 61087572 -141997960 + MLT1D LTR MaLR 451 559 -8 388 299 19 32 chr5 61088201 61088358 -141997174 - MIR SINE MIR -80 182 28 275 259 15 118 chr5 61088568 61088703 -141996829 + MIR3 SINE MIR 42 162 -46 357 282 104 49 chr5 61088704 61088831 -141996701 + MER5B DNA MER1_type 4 143 -35 2244 95 7 0 chr5 61088831 61089126 -141996406 - AluSc SINE Alu -12 297 1 357 282 104 49 chr5 61089126 61089161 -141996371 + MER5B DNA MER1_type 143 175 -3 681 265 51 39 chr5 61089667 61089901 -141995631 - MIR SINE MIR -21 241 5 474 49 0 0 chr5 61090388 61090449 -141995083 + (CA)n Simple_repeat Simple_repeat 1 61 0 23 86 0 0 chr5 61090758 61090816 -141994716 + AT_rich Low_complexity Low_complexity 1 58 0 240 122 0 0 chr5 61091463 61091504 -141994028 + (CA)n Simple_repeat Simple_repeat 1 41 0 236 326 102 21 chr5 61092383 61092570 -141992962 + L1MC/D LINE L1 5686 5887 -1921 797 248 48 56 chr5 61092907 61093177 -141992355 + LTR16C LTR ERVL 224 491 0 390 234 14 99 chr5 61093178 61093319 -141992213 + L2 LINE L2 3184 3312 -1 13916 173 50 23 chr5 61093478 61094932 -141990600 + ERVL-B1 LTR ERVL 54 1606 -4158 760 234 64 107 chr5 61094932 61095128 -141990404 + MER4C LTR ERV1 1 204 -261 2568 78 0 0 chr5 61095128 61095436 -141990096 - AluSx SINE Alu -4 308 1 760 234 64 107 chr5 61095436 61095723 -141989809 + MER4C LTR ERV1 204 463 -2 13916 173 50 23 chr5 61095723 61096787 -141988745 + ERVL-B1 LTR ERVL 1606 2640 -3124 8038 155 10 71 chr5 61096788 61098544 -141986988 + L1P4 LINE L1 3704 5320 -845 1711 198 0 10 chr5 61098544 61098842 -141986690 - AluJb SINE Alu -15 297 3 8038 155 10 71 chr5 61098842 61099123 -141986409 + L1P4 LINE L1 5320 5616 -549 2306 154 0 8 chr5 61099123 61099494 -141986038 - HSMAR2 DNA Mariner -749 553 186 1679 115 27 51 chr5 61099491 61099787 -141985745 - HSMAR2 DNA Mariner -1012 290 2 * 2469 129 13 24 chr5 61099812 61100191 -141985341 + THE1C LTR MaLR 1 375 0 10255 112 48 42 chr5 61100192 61100735 -141984797 + THE1C-int LTR MaLR 2 540 -1040 2084 154 0 0 chr5 61100735 61101046 -141984486 + AluSx SINE Alu 1 311 -1 10255 112 48 42 chr5 61101046 61102072 -141983460 + THE1C-int LTR MaLR 540 1580 0 2347 108 54 38 chr5 61102072 61102221 -141983311 + THE1C LTR MaLR 1 146 -229 1913 143 0 20 chr5 61102221 61102521 -141983011 - AluSg SINE Alu -16 294 1 2347 108 54 38 chr5 61102521 61102740 -141982792 + THE1C LTR MaLR 146 375 0 234 0 0 0 chr5 61102779 61102805 -141982727 + (TG)n Simple_repeat Simple_repeat 2 27 0 1627 145 37 7 chr5 61102828 61103124 -141982408 + ERVL-B1 LTR ERVL 5451 5755 -9 1892 215 99 19 chr5 61103126 61103550 -141981982 + MLT2B1 LTR ERVL 1 458 -62 186 43 0 0 chr5 61103555 61103578 -141981954 + (TC)n Simple_repeat Simple_repeat 2 24 0 670 209 0 8 chr5 61104762 61104891 -141980641 - AluJb SINE Alu -10 302 175 2348 92 3 3 chr5 61104896 61105199 -141980333 - AluSp SINE Alu -10 303 1 333 68 0 0 chr5 61105392 61105436 -141980096 + (TA)n Simple_repeat Simple_repeat 2 45 0 386 336 0 16 chr5 61105709 61105837 -141979695 - L2 LINE L2 0 3313 3188 328 302 180 0 chr5 61106947 61107086 -141978446 - MER5A DNA MER1_type 0 189 26 273 354 31 8 chr5 61107382 61107512 -141978020 + MIR SINE MIR 66 198 -64 4740 98 44 35 chr5 61107529 61108211 -141977321 - LTR12 LTR ERV1 0 688 1 517 283 147 5 chr5 61108974 61109165 -141976367 + MIR SINE MIR 19 236 -26 2199 98 7 17 chr5 61109225 61109522 -141976010 - AluSx SINE Alu -18 294 1 240 234 0 0 chr5 61112399 61112446 -141973086 + L2 LINE L2 3266 3312 -1 477 218 188 50 chr5 61112547 61112786 -141972746 - LTR41 LTR ERVL -1 772 501 469 204 241 15 chr5 61113121 61113258 -141972274 - LTR41 LTR ERVL -604 169 2 27 29 0 0 chr5 61113289 61113323 -141972209 + AT_rich Low_complexity Low_complexity 1 34 0 371 244 51 103 chr5 61113596 61113830 -141971702 + L1M4c LINE L1 2278 2499 -3885 412 234 263 7 chr5 61113878 61114015 -141971517 - MIR SINE MIR -84 178 7 242 94 0 0 chr5 61114015 61114047 -141971485 + MLT1H LTR MaLR 12 43 -506 2739 242 56 40 chr5 61114418 61115457 -141970075 - L1P4 LINE L1 -717 5448 4383 371 257 29 11 chr5 61115468 61115625 -141969907 - L1ME LINE L1 -4887 675 533 273 146 0 0 chr5 61115785 61115833 -141969699 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 210 205 54 27 chr5 61115850 61115962 -141969570 + (CTATA)n Simple_repeat Simple_repeat 4 118 0 270 157 29 14 chr5 61116018 61116088 -141969444 + CT-rich Low_complexity Low_complexity 4 74 0 286 227 27 55 chr5 61116389 61116454 -141969078 - L1ME LINE L1 -5938 132 73 5578 83 57 13 chr5 61116454 61117658 -141967874 - SVA Other Other -988 1385 15 286 227 27 55 chr5 61117658 61117729 -141967803 - L1ME LINE L1 -5997 73 2 278 26 26 0 chr5 61118735 61118774 -141966758 + (TG)n Simple_repeat Simple_repeat 2 41 0 2124 103 10 17 chr5 61118774 61119065 -141966467 - AluSx SINE Alu -21 291 1 578 125 23 0 chr5 61119141 61119229 -141966303 - 5S rRNA rRNA -31 90 1 1681 188 78 76 chr5 61120899 61121415 -141964117 - Charlie1b DNA MER1_type 0 523 7 207 0 0 0 chr5 61121873 61121896 -141963636 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 607 211 62 25 chr5 61121900 61122061 -141963471 - MLT1L LTR MaLR -31 584 418 245 324 0 28 chr5 61122192 61122300 -141963232 - MLT1L LTR MaLR -359 256 152 286 224 45 0 chr5 61122415 61122482 -141963050 + MIR SINE MIR 102 171 -91 369 333 17 8 chr5 61123060 61123180 -141962352 - MIR SINE MIR -118 144 24 313 368 65 11 chr5 61123807 61123992 -141961540 + MIR SINE MIR 34 228 -34 210 37 0 0 chr5 61124247 61124274 -141961258 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1898 132 35 0 chr5 61124274 61124562 -141960970 - AluSx SINE Alu -14 298 1 5804 106 14 0 chr5 61124712 61125443 -141960089 - L1PA16 LINE L1 -9 6157 5391 1995 124 7 39 chr5 61125443 61125749 -141959783 - AluSx SINE Alu -16 296 1 5804 106 14 0 chr5 61125749 61126040 -141959492 - L1PA16 LINE L1 -775 5391 5106 606 274 0 0 chr5 61126447 61126600 -141958932 + MIR SINE MIR 94 246 -16 1702 154 7 49 chr5 61126989 61127295 -141958237 - AluJb SINE Alu -16 296 4 5483 51 12 12 chr5 61127348 61128011 -141957521 - L1PA7 LINE L1 -2 6152 5490 186 43 0 0 chr5 61128281 61128304 -141957228 + (T)n Simple_repeat Simple_repeat 1 23 0 838 241 10 39 chr5 61129954 61130161 -141955371 - MER63A DNA MER1_type -9 201 1 1850 130 79 0 chr5 61130203 61130480 -141955052 + AluJo SINE Alu 1 299 -13 2520 254 54 49 chr5 61131203 61132095 -141953437 + L1MC4 LINE L1 6458 7353 -689 742 213 18 6 chr5 61132069 61132238 -141953294 + L1MB7 LINE L1 5998 6168 -16 * 477 227 386 0 chr5 61132319 61132658 -141952874 - LTR50 LTR ERVL -324 471 2 216 0 0 0 chr5 61133834 61133858 -141951674 + (T)n Simple_repeat Simple_repeat 1 24 0 2228 153 14 67 chr5 61135698 61136069 -141949463 + MLT2C1 LTR ERVL 1 349 -48 186 43 0 0 chr5 61136069 61136092 -141949440 + (CA)n Simple_repeat Simple_repeat 2 24 0 2228 153 14 67 chr5 61136092 61136139 -141949393 + MLT2C1 LTR ERVL 349 397 0 425 278 48 43 chr5 61136185 61136394 -141949138 + L2 LINE L2 3008 3217 -96 1033 283 85 22 chr5 61136394 61136804 -141948728 - LTR16A LTR ERVL 0 450 15 279 133 0 0 chr5 61136872 61136917 -141948615 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 235 351 0 0 chr5 61137574 61137651 -141947881 + L2 LINE L2 3195 3271 -1 421 258 23 38 chr5 61137655 61137787 -141947745 + MIR3 SINE MIR 38 167 -41 1910 142 38 0 chr5 61137815 61138103 -141947429 - AluJb SINE Alu -8 304 6 505 294 127 0 chr5 61140016 61140213 -141945319 - MIR SINE MIR -12 250 29 2900 90 0 0 chr5 61140342 61140697 -141944835 - THE1A LTR MaLR 0 355 1 324 48 0 0 chr5 61140852 61140894 -141944638 + (GA)n Simple_repeat Simple_repeat 1 42 0 928 197 42 24 chr5 61141092 61141305 -141944227 - MER82 DNA MER2_type -436 217 1 431 234 86 39 chr5 61141325 61141453 -141944079 + L2 LINE L2 3139 3272 0 293 224 60 0 chr5 61142966 61143033 -141942499 + MIR SINE MIR 57 127 -81 2519 55 10 3 chr5 61143241 61143548 -141941984 - AluY SINE Alu -2 309 1 668 281 49 20 chr5 61144046 61144292 -141941240 + MIR SINE MIR 9 261 -1 237 223 214 10 chr5 61144302 61144405 -141941127 - MIR SINE MIR -58 150 27 2129 112 28 0 chr5 61144417 61144703 -141940829 - AluSx SINE Alu -18 294 1 1616 150 88 15 chr5 61145674 61145948 -141939584 - AluJo SINE Alu -16 296 3 4480 140 12 36 chr5 61146035 61146214 -141939318 + MER50 LTR ERV1 1 183 -551 2322 93 0 7 chr5 61146214 61146535 -141938997 + AluSq SINE Alu 1 313 0 4480 140 12 36 chr5 61146535 61147107 -141938425 + MER50 LTR ERV1 183 734 0 329 314 76 34 chr5 61147852 61148116 -141937416 + L2 LINE L2 2535 2809 -505 868 192 33 0 chr5 61148367 61148549 -141936983 - MER53 DNA DNA -1 188 1 1626 179 21 10 chr5 61148811 61149102 -141936430 - AluJo SINE Alu -18 294 1 841 224 65 60 chr5 61150469 61150933 -141934599 - L1MC5 LINE L1 -35 7926 7461 769 219 56 114 chr5 61151072 61151501 -141934031 - L1MC4 LINE L1 -141 7901 7498 7317 41 8 2 chr5 61151529 61152407 -141933125 - L1PA5 LINE L1 -13 6141 5259 6616 116 72 63 chr5 61153958 61155204 -141930328 + pTR5 LTR ERV1 743 1999 -439 282 250 48 32 chr5 61155204 61155328 -141930204 + LTR30 LTR ERV1 517 642 -80 1591 94 5 0 chr5 61155331 61155554 -141929978 + pTR5 LTR ERV1 181 394 -2044 1949 157 13 0 chr5 61155667 61155967 -141929565 - AluSx SINE Alu -6 306 3 3314 14 0 0 chr5 61155997 61156367 -141929165 - L1PA3 LINE L1 0 6155 5786 244 364 78 0 chr5 61156623 61156752 -141928780 - MIR SINE MIR -73 189 51 567 272 55 10 chr5 61157740 61157942 -141927590 + MIR SINE MIR 31 241 -21 260 347 27 7 chr5 61158860 61159007 -141926525 - MARNA DNA Mariner -382 204 55 331 271 93 33 chr5 61159038 61159062 -141926470 + MIR SINE MIR 53 74 -188 941 182 23 68 chr5 61159062 61159230 -141926302 - MER6B DNA MER2_type -655 210 53 2229 98 47 0 chr5 61159230 61159527 -141926005 - AluSx SINE Alu -1 311 1 941 182 23 68 chr5 61159527 61159578 -141925954 - MER6B DNA MER2_type -812 53 1 331 271 93 33 chr5 61159578 61159704 -141925828 + MIR SINE MIR 74 212 -50 1092 281 117 41 chr5 61159988 61160550 -141924982 + MLT1L LTR MaLR 1 605 -10 484 232 192 7 chr5 61160865 61161016 -141924516 + MER5A DNA MER1_type 9 187 -2 2102 117 52 18 chr5 61162212 61162538 -141922994 - MER1B DNA MER1_type 0 337 1 2140 164 34 3 chr5 61163591 61163969 -141921563 - MLT1B LTR MaLR 0 390 1 289 344 0 16 chr5 61164063 61164185 -141921347 - MIR3 SINE MIR -11 197 78 596 278 7 89 chr5 61165073 61165190 -141920342 + MLT1J LTR MaLR 1 126 -385 1179 228 5 0 chr5 61165190 61165409 -141920123 + MER58A DNA MER1_type 5 224 0 596 278 7 89 chr5 61165409 61165572 -141919960 + MLT1J LTR MaLR 126 258 -253 1194 220 0 0 chr5 61165575 61165789 -141919743 - MER58A DNA MER1_type -10 214 1 307 274 54 54 chr5 61165797 61165965 -141919567 + MLT1J LTR MaLR 328 495 -16 1980 128 38 3 chr5 61166013 61166303 -141919229 - AluSx SINE Alu -12 300 1 212 301 58 29 chr5 61166356 61166459 -141919073 - L2 LINE L2 -16 3256 3151 2911 170 43 47 chr5 61166551 61167150 -141918382 - MER77 LTR ERV1 0 605 9 2478 59 7 3 chr5 61167300 61167603 -141917929 + AluY SINE Alu 1 304 -7 2154 138 7 0 chr5 61167708 61168013 -141917519 + AluSx SINE Alu 1 307 -5 246 62 0 0 chr5 61168013 61168045 -141917487 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 24 32 0 0 chr5 61175153 61175184 -141910348 + AT_rich Low_complexity Low_complexity 1 31 0 1803 115 34 0 chr5 61175677 61175946 -141909586 + L1PA16 LINE L1 5880 6157 -9 809 173 0 0 chr5 61176677 61176810 -141908722 - FLAM_C SINE Alu 0 133 1 871 101 25 0 chr5 61177219 61177338 -141908194 + AluSq/x SINE Alu 1 122 -190 194 0 39 0 chr5 61177338 61177364 -141908168 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1948 120 8 0 chr5 61177554 61177843 -141907689 - AluSx SINE Alu 0 306 16 887 194 58 58 chr5 61179486 61179728 -141905804 - MIR SINE MIR -8 254 13 1578 149 3 35 chr5 61180227 61180509 -141905023 - MER1B DNA MER1_type -66 273 1 1936 123 48 10 chr5 61181303 61181595 -141903937 - AluSx SINE Alu -9 303 1 289 253 135 65 chr5 61181928 61182098 -141903434 - MIR SINE MIR -43 219 38 252 248 41 6 chr5 61182498 61182630 -141902902 + MIR SINE MIR 14 221 -41 2381 103 7 0 chr5 61182742 61183052 -141902480 + AluSx SINE Alu 1 312 0 304 221 100 86 chr5 61183355 61183495 -141902037 + L1ME4a LINE L1 5975 6116 -5 949 188 0 0 chr5 61183565 61183730 -141901802 - FRAM SINE Alu -4 172 8 761 298 14 9 chr5 61184511 61184729 -141900803 - MIR SINE MIR -38 224 6 1170 246 89 45 chr5 61184856 61185340 -141900192 + MLT1D LTR MaLR 1 505 0 371 268 14 65 chr5 61185436 61185574 -141899958 + MIR SINE MIR 60 190 -72 272 279 79 60 chr5 61186596 61186861 -141898671 + L2 LINE L2 2612 2881 -433 220 189 27 27 chr5 61187242 61187316 -141898216 + T-rich Low_complexity Low_complexity 3 76 0 291 215 0 0 chr5 61187347 61187412 -141898120 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 214 233 41 0 chr5 61187419 61187492 -141898040 + L2 LINE L2 3170 3245 -68 410 174 9 73 chr5 61187502 61187611 -141897921 - MER5B DNA MER1_type -69 109 8 390 289 79 13 chr5 61187607 61187759 -141897773 - MIR3 SINE MIR -33 175 14 * 349 234 106 0 chr5 61187839 61187911 -141897621 - MER81 DNA DNA -1 113 27 1476 164 98 161 chr5 61187911 61188545 -141896987 + LTR49 LTR ERV1 1 594 -1 349 234 106 0 chr5 61188545 61188566 -141896966 - MER81 DNA DNA -87 27 10 563 295 107 5 chr5 61188624 61188848 -141896684 + MIR SINE MIR 14 260 -2 190 203 17 17 chr5 61188894 61188953 -141896579 + CT-rich Low_complexity Low_complexity 2 60 0 630 229 26 36 chr5 61189896 61190088 -141895444 + L1ME2 LINE L1 5799 5988 -176 200 352 23 42 chr5 61190100 61190364 -141895168 + L2 LINE L2 2422 2680 -634 39 60 0 0 chr5 61190380 61190447 -141895085 + AT_rich Low_complexity Low_complexity 1 67 0 22 35 0 0 chr5 61190682 61190711 -141894821 + AT_rich Low_complexity Low_complexity 1 29 0 1153 241 171 23 chr5 61190919 61191359 -141894173 + MLT1D LTR MaLR 1 505 0 603 346 4 4 chr5 61191430 61191673 -141893859 + L1MB7 LINE L1 5683 5925 -259 3306 98 0 0 chr5 61191459 61191899 -141893633 + L1PB1 LINE L1 5712 6151 0 23 0 0 0 chr5 61191899 61191922 -141893610 + AT_rich Low_complexity Low_complexity 1 23 0 1754 162 3 3 chr5 61191976 61192286 -141893246 - AluJb SINE Alu 0 310 1 528 305 21 14 chr5 61192287 61192560 -141892972 - L1ME LINE L1 -605 5565 5291 413 296 55 45 chr5 61192562 61192870 -141892662 - L1ME LINE L1 -883 5263 4987 2340 135 117 5 chr5 61192871 61193256 -141892276 - MSTA LTR MaLR 0 428 1 4339 146 6 21 chr5 61193256 61193375 -141892157 - MSTA-int LTR MaLR 0 1580 1461 2044 138 0 3 chr5 61193375 61193686 -141891846 + AluSx SINE Alu 1 310 -2 4339 146 6 21 chr5 61193686 61194273 -141891259 - MSTA-int LTR MaLR -119 1461 885 1945 129 6 9 chr5 61194262 61194588 -141890944 - MSTA-int LTR MaLR -1326 325 1 * 2277 127 135 5 chr5 61194588 61194965 -141890567 - MSTA LTR MaLR 0 428 3 275 286 159 25 chr5 61194970 61195372 -141890160 - L1ME LINE L1 -1158 4988 4533 1313 179 89 87 chr5 61195380 61195873 -141889659 - MER63C DNA MER1_type -436 494 1 226 35 0 0 chr5 61195999 61196028 -141889504 - MER63C DNA MER1_type -901 29 1 979 228 93 19 chr5 61196041 61196300 -141889232 + LTR16C LTR ERVL 179 456 -35 199 54 54 0 chr5 61196444 61196481 -141889051 + GA-rich Low_complexity Low_complexity 2 40 0 1256 214 4 8 chr5 61196523 61196771 -141888761 - MLT1C LTR MaLR 0 467 221 233 281 18 0 chr5 61196778 61196835 -141888697 + CT-rich Low_complexity Low_complexity 1 58 0 331 296 42 42 chr5 61198174 61198316 -141887216 + MIR SINE MIR 111 252 -10 194 213 64 0 chr5 61198520 61198567 -141886965 + MIR3 SINE MIR 112 161 -47 2418 103 0 3 chr5 61199790 61200120 -141885412 - L1P3 LINE L1 -6132 329 1 711 161 53 53 chr5 61200131 61200374 -141885158 - L1MDa LINE L1 -3981 2559 2317 566 203 72 34 chr5 61200390 61200679 -141884853 + MSTD LTR MaLR 1 396 0 277 207 144 0 chr5 61200691 61200802 -141884730 - L1MDa LINE L1 -4218 2322 2196 1285 128 5 18 chr5 61201707 61201926 -141883606 - AluY SINE Alu -14 297 82 519 82 14 0 chr5 61205881 61205954 -141879578 - AluSp/q SINE Alu -15 298 225 3191 134 88 13 chr5 61206616 61207221 -141878311 + Tigger3b DNA MER2_type 22 671 -560 228 422 0 0 chr5 61207735 61207870 -141877662 + (CA)n Simple_repeat Simple_repeat 1 135 0 210 267 128 0 chr5 61208413 61208499 -141877033 - MIR SINE MIR -110 152 56 964 103 0 14 chr5 61209058 61209203 -141876329 + AluSg/x SINE Alu 152 294 -16 816 197 71 20 chr5 61209210 61209408 -141876124 + MLT1A1 LTR MaLR 158 365 0 344 253 206 62 chr5 61209411 61209775 -141875757 + L2 LINE L2 2751 3156 -157 644 191 163 11 chr5 61209776 61209954 -141875578 + MER58C DNA MER1_type 2 206 -9 451 256 58 26 chr5 61209954 61210110 -141875422 + L2 LINE L2 3150 3310 -3 708 269 14 39 chr5 61210379 61210658 -141874874 + L1MC4 LINE L1 7768 8039 -3 371 258 191 6 chr5 61210785 61210963 -141874569 + L2 LINE L2 1902 2112 -1202 334 237 0 0 chr5 61211012 61211088 -141874444 + L2 LINE L2 2264 2339 -975 1120 177 14 23 chr5 61211106 61211321 -141874211 - AluJb SINE Alu -13 299 87 273 212 0 0 chr5 61216481 61216557 -141868975 - MIR3 SINE MIR -29 179 103 393 252 162 0 chr5 61216634 61216745 -141868787 + MIR SINE MIR 38 166 -96 650 177 8 46 chr5 61216997 61217127 -141868405 + FLAM_C SINE Alu 1 125 -8 182 342 13 13 chr5 61217318 61217397 -141868135 - MIR SINE MIR -91 171 93 1306 153 55 14 chr5 61221708 61221983 -141863549 + AluSx SINE Alu 3 288 -14 2088 145 45 0 chr5 61222644 61222976 -141862556 - MER7A DNA MER2_type 0 346 2 280 191 44 0 chr5 61223416 61223484 -141862048 - L2 LINE L2 -19 3294 3224 218 202 65 19 chr5 61223816 61223927 -141861605 - MIR SINE MIR -62 146 33 276 30 0 0 chr5 61224269 61224302 -141861230 + (A)n Simple_repeat Simple_repeat 1 33 0 1201 168 39 45 chr5 61224763 61225049 -141860483 + LTR5 LTR ERVK 686 969 0 1509 125 5 13 chr5 61225050 61225274 -141860258 + AluSg/x SINE Alu 71 292 -20 865 171 40 45 chr5 61225756 61225955 -141859577 - AluJo SINE Alu -12 300 103 424 182 2 0 chr5 61227025 61227103 -141858429 + AluJ/FLAM SINE Alu 1 65 -237 835 237 11 0 chr5 61227103 61227280 -141858252 + AluJo/FRAM SINE Alu 134 312 0 4143 175 44 10 chr5 61231124 61231638 -141853894 + L1M3 LINE L1 4373 4868 -1315 1328 209 82 34 chr5 61231638 61232016 -141853516 + MSTD LTR MaLR 1 396 0 4143 175 44 10 chr5 61232016 61232891 -141852641 + L1M3 LINE L1 4868 5805 -378 231 338 44 76 chr5 61233515 61233740 -141851792 + MIR SINE MIR 20 237 -25 386 279 134 6 chr5 61233848 61234020 -141851512 + L1ME4a LINE L1 5569 5762 -359 510 261 220 14 chr5 61234031 61234249 -141851283 + L1ME4a LINE L1 5804 6066 -55 304 273 23 0 chr5 61234281 61234369 -141851163 - MIR SINE MIR 0 262 173 816 131 13 33 chr5 61235740 61235893 -141849639 - MSTB2 LTR MaLR 0 457 308 543 78 0 0 chr5 61240186 61240263 -141845269 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 1790 232 35 34 chr5 61240270 61240883 -141844649 - L1M4 LINE L1 -2052 4094 3483 2119 104 0 16 chr5 61240883 61241190 -141844342 - AluSg SINE Alu -8 302 1 1790 232 35 34 chr5 61241190 61241628 -141843904 - L1M4 LINE L1 -2663 3483 2188 1963 126 3 3 chr5 61243801 61244095 -141841437 + AluJo SINE Alu 5 298 -14 463 221 53 8 chr5 61244763 61244894 -141840638 - MLT1G1 LTR MaLR -16 579 443 279 226 0 0 chr5 61244903 61244956 -141840576 - MLT1G1 LTR MaLR -314 281 229 1026 192 34 0 chr5 61247822 61248030 -141837502 - AluJb SINE Alu -13 299 85 1432 206 0 7 chr5 61248041 61248332 -141837200 - AluJo SINE Alu -23 289 1 338 0 24 0 chr5 61250141 61250183 -141835349 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 2456 230 21 2 chr5 61250190 61250794 -141834738 - L1MCa LINE L1 -2052 4374 3759 2206 98 0 7 chr5 61250799 61251095 -141834437 - AluSg SINE Alu -16 294 1 2452 188 21 18 chr5 61251113 61251643 -141833889 - L1MCa LINE L1 -3530 2896 2360 1780 72 0 57 chr5 61251643 61251907 -141833625 - AluY SINE Alu -9 302 54 2452 188 21 18 chr5 61251907 61252233 -141833299 - L1MCa LINE L1 -4066 2360 2036 2621 203 88 75 chr5 61252828 61253643 -141831889 + LTR1B LTR ERV1 1 826 0 1540 241 73 44 chr5 61253707 61254226 -141831306 - L1ME1 LINE L1 -14 6152 5619 1458 62 0 0 chr5 61254455 61254634 -141830898 - AluY SINE Alu -132 179 1 1586 168 111 18 chr5 61254795 61255128 -141830404 + MLT1A1 LTR MaLR 1 364 -1 408 222 121 0 chr5 61255179 61255278 -141830254 - L2 LINE L2 -11 3302 3192 2115 111 0 7 chr5 61255349 61255647 -141829885 - AluSx SINE Alu -16 296 1 2352 46 0 0 chr5 61255854 61256168 -141829364 + AluY SINE Alu 1 314 0 1657 126 0 4 chr5 61256966 61257213 -141828319 - AluSx SINE Alu -3 309 64 267 31 0 0 chr5 61257924 61257956 -141827576 + (CA)n Simple_repeat Simple_repeat 2 33 0 588 213 28 14 chr5 61258089 61258230 -141827302 - MER69 DNA AcHobo -4 2522 2380 289 130 19 56 chr5 61258359 61258413 -141827119 - MER69 DNA AcHobo -111 66 15 24 0 0 0 chr5 61259782 61259806 -141825726 + AT_rich Low_complexity Low_complexity 1 24 0 2162 95 0 10 chr5 61260169 61260475 -141825057 - AluSx SINE Alu -9 303 1 453 237 154 32 chr5 61260705 61260861 -141824671 - MIR SINE MIR -38 224 50 670 179 222 12 chr5 61260993 61261155 -141824377 - MIR SINE MIR 0 262 67 201 74 0 0 chr5 61261738 61261765 -141823767 + (TC)n Simple_repeat Simple_repeat 2 28 0 914 104 10 78 chr5 61261776 61261969 -141823563 - AluSq SINE Alu -4 309 130 1291 180 10 80 chr5 61262880 61263011 -141822521 + AluJo SINE Alu 2 141 -171 2059 78 7 4 chr5 61263011 61263292 -141822240 + AluSc SINE Alu 1 282 -27 1291 180 10 80 chr5 61263292 61263471 -141822061 + AluJo SINE Alu 141 290 -22 2354 73 0 0 chr5 61263473 61263773 -141821759 + AluY SINE Alu 1 300 -11 288 0 0 0 chr5 61263860 61263892 -141821640 + (GA)n Simple_repeat Simple_repeat 1 32 0 2246 86 3 0 chr5 61264920 61265212 -141820320 + AluSp SINE Alu 1 293 -20 577 179 0 86 chr5 61265226 61265343 -141820189 + L1ME LINE L1 5477 5583 -583 1635 135 53 50 chr5 61265343 61265684 -141819848 + MER4A LTR ERV1 1 342 -322 2109 105 0 3 chr5 61265686 61265981 -141819551 + AluSg SINE Alu 1 294 -16 712 158 181 73 chr5 61265994 61266271 -141819261 + MER4C LTR ERV1 157 465 0 465 188 0 0 chr5 61266271 61266351 -141819181 + L1ME LINE L1 5580 5659 -507 630 298 66 40 chr5 61266423 61266725 -141818807 - L2 LINE L2 -444 2870 2561 2412 55 0 0 chr5 61266773 61267066 -141818466 - AluY SINE Alu -18 293 1 224 224 0 20 chr5 61267214 61267263 -141818269 + CT-rich Low_complexity Low_complexity 4 51 0 1800 135 0 18 chr5 61267263 61267545 -141817987 - AluSx SINE Alu -35 277 1 228 277 193 18 chr5 61267552 61267718 -141817814 + L3 LINE CR1 1375 1569 -8 326 208 111 0 chr5 61268025 61268097 -141817435 + MER58B DNA MER1_type 11 90 -251 2461 65 0 7 chr5 61268121 61268430 -141817102 + AluSp SINE Alu 1 307 -6 4747 158 52 14 chr5 61268483 61269005 -141816527 + L1MB4 LINE L1 5119 5619 -561 2119 92 24 3 chr5 61269005 61269297 -141816235 + AluSx SINE Alu 1 298 -14 4747 158 52 14 chr5 61269297 61269796 -141815736 + L1MB4 LINE L1 5619 6180 0 546 133 11 22 chr5 61269794 61269884 -141815648 - L1MD1 LINE L1 -53 6189 6101 * 1234 97 0 0 chr5 61269885 61270050 -141815482 + AluSx SINE Alu 2 166 -146 313 214 14 0 chr5 61270050 61270120 -141815412 - L1MD2 LINE L1 -144 6215 6145 996 187 64 44 chr5 61270122 61270248 -141815284 + MER58B DNA MER1_type 86 208 -2212 2175 113 26 0 chr5 61270248 61270550 -141814982 - AluSx SINE Alu -2 310 1 996 187 64 44 chr5 61270550 61270674 -141814858 + MER58B DNA MER1_type 208 341 0 943 270 119 65 chr5 61270949 61271379 -141814153 - MLT1L LTR MaLR -13 602 197 2150 110 0 3 chr5 61271379 61271679 -141813853 + AluSx SINE Alu 1 299 -13 943 270 119 65 chr5 61271679 61271770 -141813762 - MLT1L LTR MaLR -418 197 112 1957 115 21 0 chr5 61271770 61272057 -141813475 + AluSx SINE Alu 5 297 -15 943 270 119 65 chr5 61272057 61272105 -141813427 - MLT1L LTR MaLR -503 112 1 760 189 0 11 chr5 61272306 61272486 -141813046 + CT-rich Low_complexity Low_complexity 3 180 0 873 183 54 12 chr5 61272487 61272699 -141812833 - MLT1C LTR MaLR -163 227 1 446 333 97 56 chr5 61273579 61273993 -141811539 + L2 LINE L2 2823 3253 -19 216 0 0 0 chr5 61274556 61274580 -141810952 + (CA)n Simple_repeat Simple_repeat 1 24 0 207 0 0 0 chr5 61275296 61275319 -141810213 + (T)n Simple_repeat Simple_repeat 1 23 0 301 318 45 0 chr5 61275438 61275526 -141810006 - MIR SINE MIR -15 247 156 626 193 14 0 chr5 61275532 61275677 -141809855 + CT-rich Low_complexity Low_complexity 3 149 0 207 328 43 17 chr5 61275728 61275844 -141809688 - MIR3 SINE MIR -78 130 12 534 201 98 6 chr5 61276336 61276500 -141809032 + L1M4 LINE L1 4381 4559 -1587 551 193 0 0 chr5 61276510 61276598 -141808934 + MER58A DNA MER1_type 1 88 -19 276 244 51 0 chr5 61276667 61276745 -141808787 + MER58A DNA MER1_type 133 214 -10 581 223 54 24 chr5 61276754 61276920 -141808612 + L1M4 LINE L1 4572 4742 -1404 779 269 6 6 chr5 61277899 61278070 -141807462 + MIR SINE MIR 2 172 -90 223 246 0 0 chr5 61278583 61278640 -141806892 - L3b LINE CR1 -423 1160 1104 722 244 79 43 chr5 61279599 61279853 -141805679 - MLT1J2 LTR MaLR 0 450 188 531 232 0 0 chr5 61279898 61279993 -141805539 - MLT1J1 LTR MaLR -351 95 1 635 270 52 67 chr5 61280004 61280271 -141805261 + Charlie8 DNA MER1_type 2 264 -2153 1519 194 113 61 chr5 61280273 61280331 -141805201 + LTR29 LTR ERV1 1 55 -732 2126 191 72 119 chr5 61280331 61281094 -141804438 - LTR8A LTR ERV1 0 727 1 1519 194 113 61 chr5 61281094 61281638 -141803894 + LTR29 LTR ERV1 55 787 0 2122 87 0 0 chr5 61281716 61282004 -141803528 - AluY SINE Alu -5 306 19 2241 67 0 3 chr5 61282922 61283245 -141802287 + AluY SINE Alu 1 322 0 1816 140 16 57 chr5 61283340 61283722 -141801810 - MER7A DNA MER2_type -1 345 2 270 265 80 33 chr5 61284083 61284234 -141801298 - MIR SINE MIR -77 185 28 481 316 0 7 chr5 61285379 61285515 -141800017 + MIR SINE MIR 18 152 -110 797 243 5 35 chr5 61285527 61285729 -141799803 - MIR SINE MIR -1 261 66 183 328 0 0 chr5 61285728 61285789 -141799743 + MIR SINE MIR 154 214 -48 * 2018 109 31 3 chr5 61285891 61286185 -141799347 - AluSg SINE Alu -8 302 1 1500 226 33 41 chr5 61286621 61287011 -141798521 - MLT1B LTR MaLR 0 390 4 2330 49 20 23 chr5 61287813 61288118 -141797414 + AluY SINE Alu 1 304 -7 455 204 115 76 chr5 61289107 61289264 -141796268 - MIR SINE MIR -10 252 90 252 86 0 0 chr5 61291206 61291241 -141794291 + (A)n Simple_repeat Simple_repeat 1 35 0 349 273 47 16 chr5 61292751 61292878 -141792654 + MIR3 SINE MIR 67 202 -6 403 107 27 0 chr5 61293660 61293735 -141791797 + GA-rich Low_complexity Low_complexity 1 77 0 2368 152 52 11 chr5 61294533 61294974 -141790558 - L1MB7 LINE L1 -1 6183 5725 2639 172 64 2 chr5 61294976 61295475 -141790057 - L1MA5 LINE L1 0 6300 5771 5867 120 3 46 chr5 61295476 61296168 -141789364 - L1PA14 LINE L1 -6 6155 5435 2128 98 0 27 chr5 61296168 61296464 -141789068 - AluSq SINE Alu -25 288 1 5867 120 3 46 chr5 61296464 61296615 -141788917 - L1PA14 LINE L1 -726 5435 5279 1918 167 0 0 chr5 61296615 61296914 -141788618 - AluSx SINE Alu -13 299 1 5867 120 3 46 chr5 61296914 61297403 -141788129 - L1PA14 LINE L1 -882 5279 4876 184 226 19 19 chr5 61297429 61297482 -141788050 - MIR SINE MIR -65 143 91 1068 163 31 75 chr5 61297513 61297740 -141787792 + MER20 DNA MER1_type 3 219 0 228 305 168 52 chr5 61297740 61297998 -141787534 + L2 LINE L2 2159 2481 -833 2071 161 54 11 chr5 61297998 61298347 -141787185 + THE1B LTR MaLR 1 364 0 228 305 168 52 chr5 61298347 61298488 -141787044 + L2 LINE L2 2481 2604 -710 307 218 264 9 chr5 61298545 61298655 -141786877 - MIR SINE MIR -79 183 46 348 330 85 30 chr5 61298704 61298904 -141786628 + L2 LINE L2 2833 3043 -229 184 374 131 0 chr5 61298889 61298988 -141786544 + L2 LINE L2 3160 3271 -1 * 3595 149 52 5 chr5 61299173 61299751 -141785781 - MER6A DNA MER2_type 0 605 1 2166 118 20 0 chr5 61300880 61301184 -141784348 - AluSq SINE Alu -3 310 1 22 35 0 0 chr5 61301195 61301224 -141784308 + AT_rich Low_complexity Low_complexity 1 29 0 1143 236 80 16 chr5 61301264 61301578 -141783954 - MLT1A1 LTR MaLR 0 365 32 1241 270 54 61 chr5 61301704 61302505 -141783027 + L2 LINE L2 2525 3313 0 197 294 174 0 chr5 61303202 61303294 -141782238 - MIR3 SINE MIR -2 206 99 2414 167 43 10 chr5 61304423 61304837 -141780695 + MSTA LTR MaLR 1 428 0 326 341 134 11 chr5 61304839 61305123 -141780409 + L3b LINE CR1 1134 1452 -131 794 172 81 27 chr5 61305131 61305317 -141780215 + L1MB5 LINE L1 4650 4845 -1301 * 1881 175 41 93 chr5 61305312 61305497 -141780035 - L1ME LINE L1 -384 5782 5589 2906 160 10 12 chr5 61305497 61305992 -141779540 - L1MB2 LINE L1 -2 6169 5676 1881 175 41 93 chr5 61305992 61306086 -141779446 - L1ME LINE L1 -577 5589 5492 7629 59 8 11 chr5 61306086 61307672 -141777860 + SVA Other Other 1 1385 -1 1881 175 41 93 chr5 61307672 61307852 -141777680 - L1ME LINE L1 -674 5492 5343 3523 221 46 31 chr5 61308039 61309019 -141776513 - L1ME LINE L1 -811 5335 4341 2395 170 132 62 chr5 61310372 61311088 -141774444 - LTR1B LTR ERV1 0 785 1 5315 168 10 11 chr5 61311093 61312087 -141773445 + L1MB5 LINE L1 5173 6173 -1 10652 147 116 48 chr5 61312994 61314778 -141770754 + L1MCa LINE L1 5 1667 -4759 1789 178 7 3 chr5 61314778 61315070 -141770462 + AluJb SINE Alu 1 293 -19 10652 147 116 48 chr5 61315070 61315257 -141770275 + L1MCa LINE L1 1667 1840 -4586 2530 64 0 0 chr5 61315257 61315554 -141769978 - AluY SINE Alu -13 298 2 10652 147 116 48 chr5 61315554 61315866 -141769666 + L1MCa LINE L1 1840 2443 -3983 3529 229 37 13 chr5 61316986 61318006 -141767526 + L1MCa LINE L1 2429 3473 -2953 4388 176 38 29 chr5 61318006 61318833 -141766699 - L1PA12 LINE L1 -6589 992 159 588 64 0 0 chr5 61319132 61319210 -141766322 - L1HS LINE L1 0 6155 6078 445 200 13 20 chr5 61319843 61319993 -141765539 + CT-rich Low_complexity Low_complexity 3 151 0 441 0 0 0 chr5 61323296 61323345 -141762187 + (TA)n Simple_repeat Simple_repeat 1 49 0 414 191 127 48 chr5 61323364 61323490 -141762042 + MER103 DNA DNA 29 164 -2 11877 159 36 2 chr5 61323741 61327207 -141758325 + L1PA14 LINE L1 1278 4866 -2718 9446 158 26 1 chr5 61327214 61327838 -141757694 + L1PA14 LINE L1 5146 5753 -1846 2726 7 0 0 chr5 61327838 61328129 -141757403 + AluYb8 SINE Alu 28 318 0 9446 158 26 1 chr5 61328129 61329006 -141756526 + L1PA14 LINE L1 5753 6606 -993 2387 73 6 13 chr5 61329006 61329319 -141756213 + AluY SINE Alu 1 311 0 9446 158 26 1 chr5 61329319 61330258 -141755274 + L1PA14 LINE L1 6606 7580 -19 1939 204 49 0 chr5 61330576 61330924 -141754608 - MLT1A1 LTR MaLR 0 365 1 1636 240 59 42 chr5 61331071 61331667 -141753865 - L1M4c LINE L1 -4551 1833 1228 186 43 0 0 chr5 61331677 61331700 -141753832 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 6549 80 13 5 chr5 61331705 61333122 -141752410 - SVA Other Other -839 1369 58 468 51 0 0 chr5 61333122 61333181 -141752351 + (GGGAGA)n Simple_repeat Simple_repeat 2 60 0 253 276 26 0 chr5 61333395 61333471 -141752061 - MIR3 SINE MIR -21 187 110 2256 110 0 0 chr5 61334153 61334445 -141751087 - AluSx SINE Alu -16 296 5 336 143 0 0 chr5 61335471 61335527 -141750005 + L1MB2 LINE L1 5936 5991 -180 28 71 0 0 chr5 61336072 61336128 -141749404 + AT_rich Low_complexity Low_complexity 1 56 0 850 276 197 30 chr5 61338196 61338269 -141747263 - L3 LINE CR1 -287 1290 1231 2457 79 0 0 chr5 61338269 61338572 -141746960 + AluSq SINE Alu 1 303 -10 850 276 197 30 chr5 61338572 61339030 -141746502 - L3 LINE CR1 -346 1231 670 195 162 0 0 chr5 61340293 61340330 -141745202 + T-rich Low_complexity Low_complexity 1 37 0 232 143 0 0 chr5 61340764 61340799 -141744733 + Alu SINE Alu 132 166 -9 685 276 109 0 chr5 61341044 61341254 -141744278 - MIR SINE MIR 0 262 30 1408 184 24 20 chr5 61341267 61341560 -141743972 - MER33 DNA MER1_type -14 310 17 247 288 176 8 chr5 61341691 61341816 -141743716 - MER91A DNA MER1_type -1 195 50 1537 245 31 58 chr5 61342722 61343206 -141742326 + L1ME3A LINE L1 5504 5975 -195 2443 57 30 0 chr5 61343280 61343581 -141741951 - AluY SINE Alu -1 310 1 274 287 43 0 chr5 61343622 61343716 -141741816 + MER112 DNA MER1_type 157 254 -6 535 241 8 30 chr5 61343753 61343886 -141741646 + MIR SINE MIR 99 228 -34 233 214 0 0 chr5 61346386 61346428 -141739104 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 1242 204 111 63 chr5 61347949 61348391 -141737141 + LTR37B LTR ERV1 6 468 0 1752 189 0 10 chr5 61349004 61349300 -141736232 - AluJo SINE Alu -14 298 6 1251 173 0 19 chr5 61349329 61349543 -141735989 + AluJo SINE Alu 88 297 -15 339 25 0 0 chr5 61350583 61350623 -141734909 + (TG)n Simple_repeat Simple_repeat 2 41 0 3356 89 11 20 chr5 61350756 61351204 -141734328 - MLT2A1 LTR ERVL 0 444 1 180 0 0 0 chr5 61352057 61352077 -141733455 + (TTG)n Simple_repeat Simple_repeat 2 21 0 204 235 20 0 chr5 61352312 61352363 -141733169 - L2 LINE L2 -1 3312 3261 231 350 120 8 chr5 61352626 61352743 -141732789 + L2 LINE L2 3140 3269 -3 221 164 0 109 chr5 61353578 61353601 -141731931 + MIR SINE MIR 82 106 -102 2226 143 110 15 chr5 61353601 61353992 -141731540 + MSTA LTR MaLR 1 428 0 221 164 0 109 chr5 61353992 61354023 -141731509 + MIR SINE MIR 106 130 -78 547 301 70 48 chr5 61354566 61355031 -141730501 - L2 LINE L2 -25 3288 2737 685 262 47 52 chr5 61355033 61355396 -141730136 - L1MEc LINE L1 -5040 1356 996 195 308 39 26 chr5 61356764 61356842 -141728690 - MIR SINE MIR -100 108 30 252 0 0 0 chr5 61357203 61357231 -141728301 + (T)n Simple_repeat Simple_repeat 1 28 0 270 170 0 0 chr5 61357283 61357330 -141728202 - L2 LINE L2 0 3313 3267 1232 247 70 22 chr5 61357408 61357809 -141727723 + LTR16C LTR ERVL 61 480 -11 345 172 31 0 chr5 61357995 61358059 -141727473 + MER116 DNA Mariner 1 66 -14 1525 163 8 0 chr5 61358153 61358399 -141727133 - AluSx SINE Alu -64 248 1 741 285 91 7 chr5 61358492 61358766 -141726766 - MLT1J LTR MaLR -205 306 10 219 69 0 0 chr5 61358909 61358938 -141726594 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2094 140 3 3 chr5 61359041 61359348 -141726184 - AluSx SINE Alu -5 307 1 388 305 129 14 chr5 61359794 61360449 -141725083 - L1MC/D LINE L1 -655 5587 4860 453 36 0 0 chr5 61360579 61360634 -141724898 + (CA)n Simple_repeat Simple_repeat 2 56 0 390 348 39 0 chr5 61361224 61361405 -141724127 + MIR3 SINE MIR 13 200 -8 380 273 63 81 chr5 61362251 61362522 -141723010 + L2 LINE L2 2804 3069 -203 28 29 0 0 chr5 61362974 61363009 -141722523 + AT_rich Low_complexity Low_complexity 1 35 0 488 273 132 52 chr5 61363831 61364194 -141721338 + MLT1L LTR MaLR 164 555 -60 432 226 39 20 chr5 61364269 61364371 -141721161 - L2 LINE L2 -1 3271 3168 3577 145 21 50 chr5 61365580 61366008 -141719524 + MER6A DNA MER2_type 4 443 -422 2532 62 3 0 chr5 61366008 61366315 -141719217 + AluY SINE Alu 1 308 -3 3577 145 21 50 chr5 61366315 61366326 -141719206 + MER6A DNA MER2_type 443 453 -412 1790 154 3 20 chr5 61366326 61366624 -141718908 - AluJo SINE Alu -19 293 1 3577 145 21 50 chr5 61366624 61366803 -141718729 + MER6A DNA MER2_type 453 605 0 325 387 0 0 chr5 61366881 61367000 -141718532 - L2 LINE L2 -15 3257 3139 2762 135 36 2 chr5 61368487 61368901 -141716631 - MSTA LTR MaLR 0 428 1 466 301 31 0 chr5 61368916 61369079 -141716453 + MIR3 SINE MIR 32 199 -9 287 94 0 19 chr5 61370918 61370971 -141714561 + (TC)n Simple_repeat Simple_repeat 2 53 0 351 0 0 0 chr5 61370971 61371010 -141714522 + (CA)n Simple_repeat Simple_repeat 1 39 0 929 268 62 78 chr5 61371088 61371617 -141713915 + L1MC/D LINE L1 50 570 -5549 5598 102 25 0 chr5 61371619 61372407 -141713125 + L1PB1 LINE L1 5342 6149 -2 331 195 153 25 chr5 61372484 61372602 -141712930 + L1MC/D LINE L1 661 793 -5326 557 253 119 36 chr5 61372716 61373181 -141712351 + L1MC/D LINE L1 4926 5429 -732 228 275 29 43 chr5 61373184 61373253 -141712279 + L1MC/D LINE L1 5510 5577 -2214 2172 140 17 42 chr5 61373513 61373544 -141711988 - MER7A DNA MER2_type -2692 346 316 2254 113 3 0 chr5 61373544 61373855 -141711677 - AluSx SINE Alu 0 312 1 2172 140 17 42 chr5 61373855 61374180 -141711352 - MER7A DNA MER2_type -2722 316 1 232 311 0 0 chr5 61374409 61374470 -141711062 - L2 LINE L2 -1 3312 3252 825 259 24 5 chr5 61374695 61374900 -141710632 - MIR SINE MIR -36 226 18 196 286 0 18 chr5 61374986 61375042 -141710490 - MIR3 SINE MIR -3 205 151 302 296 130 0 chr5 61375051 61375159 -141710373 + L2 LINE L2 3192 3313 0 293 300 20 20 chr5 61375314 61375414 -141710118 - MIR3 SINE MIR -46 162 63 365 344 34 18 chr5 61376651 61377035 -141708497 - L1MC4a LINE L1 -1810 5998 5609 1832 179 50 30 chr5 61377074 61377437 -141708095 - MLT1A2 LTR MaLR 0 374 5 2795 236 102 15 chr5 61377536 61378401 -141707131 + L1MEd LINE L1 2093 3032 -3097 309 280 102 59 chr5 61378545 61378731 -141706801 - LTR67 LTR ERVL -265 292 99 329 282 73 8 chr5 61379313 61379437 -141706095 - LTR67 LTR ERVL -2 555 424 195 129 0 0 chr5 61379487 61379518 -141706014 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2295 111 0 3 chr5 61379951 61380257 -141705275 + AluSx SINE Alu 1 305 -7 24 0 0 0 chr5 61380257 61380281 -141705251 + AT_rich Low_complexity Low_complexity 1 24 0 297 285 46 15 chr5 61380281 61380411 -141705121 - L1MC/D LINE L1 -1959 5849 5716 436 274 18 0 chr5 61380652 61380765 -141704767 + MIR3 SINE MIR 60 174 -34 358 250 258 0 chr5 61381454 61381582 -141703950 + MIR SINE MIR 49 209 -53 269 380 33 0 chr5 61382560 61382652 -141702880 + L2 LINE L2 3200 3294 -19 241 239 0 0 chr5 61382612 61382658 -141702874 + MIR SINE MIR 210 255 -7 * 368 256 55 70 chr5 61382668 61382867 -141702665 - MLT1L LTR MaLR 0 615 420 439 153 35 132 chr5 61382867 61383011 -141702521 + L2 LINE L2 2679 2808 -506 913 189 9 60 chr5 61383023 61383240 -141702292 + L2 LINE L2 3108 3313 0 340 274 137 64 chr5 61383244 61383478 -141702054 - MLT1L LTR MaLR -161 454 204 416 299 47 24 chr5 61384331 61384458 -141701074 + L2 LINE L2 3143 3272 0 243 311 106 38 chr5 61385687 61385819 -141699713 - MIR SINE MIR -54 208 68 1745 209 30 51 chr5 61386254 61386724 -141698808 + MLT1C LTR MaLR 1 460 -7 774 180 8 0 chr5 61386816 61386938 -141698594 - FRAM SINE Alu -14 162 40 195 42 0 0 chr5 61386952 61386976 -141698556 + (TG)n Simple_repeat Simple_repeat 1 24 0 559 236 14 35 chr5 61387606 61387750 -141697782 - MER58B DNA MER1_type -10 331 191 1313 243 21 19 chr5 61387946 61388320 -141697212 - LTR16A LTR ERVL -60 390 16 763 234 35 72 chr5 61388320 61388610 -141696922 - MLT2C1 LTR ERVL 0 397 119 1833 222 99 38 chr5 61390600 61391185 -141694347 - MLT1E1 LTR MaLR -33 621 1 944 230 15 5 chr5 61391185 61391381 -141694151 - MER58B DNA MER1_type -143 198 1 305 386 51 11 chr5 61392156 61392332 -141693200 - MIR3 SINE MIR -11 197 15 3867 107 68 25 chr5 61393672 61394271 -141691261 + L1PA16 LINE L1 5533 6157 -9 21 0 0 0 chr5 61394271 61394292 -141691240 + AT_rich Low_complexity Low_complexity 1 21 0 1808 141 14 84 chr5 61395262 61395632 -141689900 + L1MB5 LINE L1 5545 5888 -286 185 206 0 16 chr5 61395638 61395701 -141689831 + (ATG)n Simple_repeat Simple_repeat 1 62 0 356 282 70 19 chr5 61395999 61396155 -141689377 - MIR SINE MIR -16 246 83 209 224 20 0 chr5 61396984 61397033 -141688499 - MIR SINE MIR -59 149 100 2587 98 35 19 chr5 61397401 61397770 -141687762 - THE1C LTR MaLR 0 375 1 365 220 33 0 chr5 61397833 61397924 -141687608 - MIR SINE MIR -62 200 107 1926 152 142 45 chr5 61398348 61399124 -141686408 + pTR5 LTR ERV1 31 219 -495 1022 132 27 36 chr5 61399270 61399490 -141686042 - Tigger6a DNA MER2_type -97 986 769 1599 216 92 25 chr5 61399550 61399994 -141685538 - MER74B LTR ERVL -93 529 56 3251 176 35 61 chr5 61400002 61400776 -141684756 - Tigger6a DNA MER2_type -306 777 24 207 179 0 75 chr5 61401367 61401434 -141684098 + (TATG)n Simple_repeat Simple_repeat 1 62 0 981 302 85 6 chr5 61401630 61401994 -141683538 - LTR16C LTR ERVL 0 491 99 573 225 80 0 chr5 61402081 61402232 -141683300 - MIR SINE MIR -16 246 84 269 263 25 0 chr5 61403084 61403164 -141682368 + (TA)n Simple_repeat Simple_repeat 1 82 0 273 301 228 0 chr5 61403492 61403628 -141681904 - MIR3 SINE MIR -16 192 26 760 279 67 4 chr5 61404859 61405099 -141680433 - MIR SINE MIR -6 256 2 379 242 71 50 chr5 61405160 61405358 -141680174 - L2 LINE L2 0 3313 3112 399 303 64 32 chr5 61405419 61405670 -141679862 - LTR16C LTR ERVL -36 455 197 392 303 97 12 chr5 61405895 61406185 -141679347 - L2 LINE L2 -258 3055 2739 2099 111 0 0 chr5 61406532 61406823 -141678709 - AluSg SINE Alu 0 301 11 1848 105 0 20 chr5 61407945 61408226 -141677306 - AluSx SINE Alu 0 315 40 652 128 8 8 chr5 61409814 61409939 -141675593 + (TTCC)n Simple_repeat Simple_repeat 2 126 0 251 196 0 0 chr5 61409981 61410027 -141675505 - L2 LINE L2 -1 3312 3267 228 274 0 14 chr5 61410299 61410372 -141675160 + MLT1L LTR MaLR 467 538 -77 891 217 66 9 chr5 61410457 61410669 -141674863 + MER58A DNA MER1_type 1 224 0 328 278 146 13 chr5 61412675 61412826 -141672706 + MIR SINE MIR 89 259 -3 734 274 55 47 chr5 61412985 61413059 -141672473 - L1ME LINE L1 -362 5759 5687 2283 105 10 0 chr5 61413059 61413364 -141672168 + AluSq SINE Alu 1 308 -5 734 274 55 47 chr5 61413364 61413654 -141671878 - L1ME LINE L1 -434 5687 5392 272 340 0 19 chr5 61414019 61414122 -141671410 - L2 LINE L2 -14 3299 3199 * 363 324 130 5 chr5 61414121 61414337 -141671195 - MIR SINE MIR -13 249 7 321 192 0 0 chr5 61414361 61414413 -141671119 - Tigger6 DNA MER2_type 0 1597 1546 1902 148 0 11 chr5 61414413 61414696 -141670836 + AluJb SINE Alu 1 280 -32 269 26 0 26 chr5 61414698 61414737 -141670795 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1940 126 0 0 chr5 61414945 61415215 -141670317 + AluSx SINE Alu 30 299 -13 33 43 0 0 chr5 61416681 61416728 -141668804 + GC_rich Low_complexity Low_complexity 1 47 0 627 204 145 7 chr5 61417705 61417857 -141667675 + MER45A DNA AcHobo 1 173 -5 1678 206 19 32 chr5 61418331 61418710 -141666822 + MLT1A2 LTR MaLR 1 374 0 1890 155 18 0 chr5 61419188 61419493 -141666039 - AluSx SINE Alu 0 310 1 27 87 0 0 chr5 61419588 61419657 -141665875 + AT_rich Low_complexity Low_complexity 1 69 0 431 294 118 13 chr5 61419663 61419891 -141665641 - MIR SINE MIR -10 252 1 1830 96 0 0 chr5 61420317 61420566 -141664966 - AluY SINE Alu -13 298 50 1340 224 132 11 chr5 61421860 61422208 -141663324 + MER34 LTR ERV1 11 400 -142 1959 58 113 4 chr5 61422212 61422486 -141663046 - L1PA4 LINE L1 0 6155 5852 1100 30 8 0 chr5 61422486 61422618 -141662914 + L1PA4 LINE L1 5725 5857 -298 693 189 91 0 chr5 61422618 61422761 -141662771 + MER34 LTR ERV1 384 539 -3 234 91 0 0 chr5 61423927 61423960 -141661572 + (CA)n Simple_repeat Simple_repeat 1 33 0 2574 158 36 2 chr5 61424024 61424473 -141661059 + L1MB2 LINE L1 5707 6170 -1 624 158 53 0 chr5 61424639 61424753 -141660779 + L1MB2 LINE L1 6049 6168 -3 2317 112 0 13 chr5 61424925 61425104 -141660428 - AluSx SINE Alu 0 312 137 2482 75 0 13 chr5 61425104 61425411 -141660121 - AluY SINE Alu -8 303 1 2317 112 0 13 chr5 61425411 61425545 -141659987 - AluSx SINE Alu -175 137 3 324 309 45 51 chr5 61425910 61426088 -141659444 + MLT1J2 LTR MaLR 240 416 -34 2427 135 36 73 chr5 61426668 61427172 -141658360 + LTR12 LTR ERV1 230 714 0 816 265 27 0 chr5 61427285 61427504 -141658028 + MIR SINE MIR 13 237 -25 490 289 108 15 chr5 61427612 61427816 -141657716 - MIR SINE MIR -11 251 29 22 56 0 0 chr5 61427890 61427926 -141657606 + AT_rich Low_complexity Low_complexity 1 36 0 221 279 0 70 chr5 61429253 61429339 -141656193 - L2 LINE L2 0 3272 3193 261 330 52 62 chr5 61430454 61430648 -141654884 + MLT1L LTR MaLR 21 212 -403 2445 180 24 15 chr5 61430681 61431137 -141654395 - MER66B LTR ERV1 0 486 27 309 233 105 23 chr5 61433722 61433855 -141651677 + L1MC4a LINE L1 5256 5399 -2409 528 264 43 6 chr5 61433947 61434110 -141651422 + L1ME3A LINE L1 6002 6170 0 238 287 74 28 chr5 61434099 61434207 -141651325 + L1MC4a LINE L1 5420 5532 -2276 * 1354 251 72 40 chr5 61434207 61434776 -141650756 + L1MC4a LINE L1 5474 6060 -1748 2190 101 21 0 chr5 61436010 61436298 -141649234 + AluSg SINE Alu 1 294 -16 4721 124 147 70 chr5 61436420 61437699 -141647833 - pTR5 LTR ERV1 0 2438 745 601 255 138 21 chr5 61437699 61437938 -141647594 - MLT1I LTR MaLR -31 378 112 229 274 14 14 chr5 61438162 61438235 -141647297 - MIR3 SINE MIR -49 159 87 369 228 89 0 chr5 61439203 61439304 -141646228 - MER69 DNA AcHobo -10 2516 2407 874 239 0 5 chr5 61439380 61439564 -141645968 - MER69 DNA AcHobo -1020 206 24 22 0 0 0 chr5 61439669 61439691 -141645841 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr5 61439730 61439754 -141645778 + (T)n Simple_repeat Simple_repeat 1 24 0 221 320 12 15 chr5 61441581 61441704 -141643828 + MIR SINE MIR 25 130 -78 1765 182 48 24 chr5 61442562 61442941 -141642591 - MLT1B LTR MaLR -2 388 1 23 0 0 0 chr5 61443822 61443845 -141641687 + AT_rich Low_complexity Low_complexity 1 23 0 305 317 130 0 chr5 61443874 61443997 -141641535 - MER117 DNA MER1_type -4 193 55 2046 88 0 27 chr5 61444027 61444289 -141641243 + AluSc SINE Alu 36 290 -19 537 261 139 0 chr5 61444396 61444576 -141640956 - MIR SINE MIR -56 206 2 349 303 45 41 chr5 61444586 61444807 -141640725 + L3 LINE CR1 1306 1527 -50 2275 90 0 23 chr5 61445657 61445956 -141639576 - AluSg SINE Alu -18 292 1 456 170 28 47 chr5 61446799 61446905 -141638627 - MIR SINE MIR -43 219 116 452 270 56 27 chr5 61448255 61448358 -141637174 + MLT1L LTR MaLR 221 320 -295 195 42 0 0 chr5 61448358 61448382 -141637150 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 452 270 56 27 chr5 61448382 61448626 -141636906 + MLT1L LTR MaLR 320 610 -5 1580 226 59 66 chr5 61449784 61450345 -141635187 - LTR67 LTR ERVL 0 557 1 21 71 0 0 chr5 61450449 61450491 -141635041 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr5 61450754 61450784 -141634748 + (A)n Simple_repeat Simple_repeat 1 30 0 360 0 0 0 chr5 61450784 61450824 -141634708 + (TA)n Simple_repeat Simple_repeat 2 41 0 248 226 0 0 chr5 61451819 61451872 -141633660 + (CA)n Simple_repeat Simple_repeat 1 53 0 934 239 18 9 chr5 61451953 61452179 -141633353 + MIR SINE MIR 34 261 -1 239 281 250 6 chr5 61452281 61452445 -141633087 - MIR SINE MIR -56 206 3 457 241 178 29 chr5 61452488 61452729 -141632803 - MARNA DNA Mariner -162 424 148 2401 166 26 2 chr5 61452867 61453289 -141632243 + MSTB1 LTR MaLR 1 432 0 763 234 35 72 chr5 61455524 61455814 -141629718 + MLT2C1 LTR ERVL 119 397 0 * 1530 242 37 14 chr5 61455814 61456239 -141629293 + LTR16A LTR ERVL 16 450 0 207 0 0 0 chr5 61456414 61456437 -141629095 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 334 321 176 32 chr5 61456449 61457081 -141628451 + L2 LINE L2 1774 2496 -818 360 94 0 0 chr5 61457088 61457141 -141628391 + (TC)n Simple_repeat Simple_repeat 1 53 0 899 340 20 18 chr5 61457297 61457697 -141627835 + MER115 DNA AcHobo 40 440 -253 254 317 93 68 chr5 61457761 61458083 -141627449 - L2 LINE L2 -21 3251 2922 401 321 56 15 chr5 61458588 61458784 -141626748 + MIR SINE MIR 2 205 -57 2300 98 0 0 chr5 61460357 61460653 -141624879 + AluSg SINE Alu 1 296 -14 311 295 90 13 chr5 61460897 61461053 -141624479 - MIR SINE MIR -76 186 19 207 0 0 0 chr5 61462199 61462222 -141623310 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 457 241 161 6 chr5 61462269 61462431 -141623101 + MIR SINE MIR 3 189 -73 206 265 248 0 chr5 61464352 61464469 -141621063 - MER5A DNA MER1_type -18 171 26 275 296 86 0 chr5 61464550 61464631 -141620901 - L2 LINE L2 -49 3223 3136 873 161 202 23 chr5 61464900 61465118 -141620414 - LTR37B LTR ERV1 -14 454 198 428 301 66 0 chr5 61465426 61465592 -141619940 - MIR SINE MIR -38 224 48 379 262 8 49 chr5 61466282 61466404 -141619128 + MER5A DNA MER1_type 44 160 -29 1973 139 3 3 chr5 61466481 61466769 -141618763 - AluJb SINE Alu -19 293 6 413 209 209 0 chr5 61466909 61467043 -141618489 - MER5A DNA MER1_type 0 189 28 2022 197 66 9 chr5 61467116 61467542 -141617990 - MLT1D LTR MaLR 0 505 56 461 123 14 0 chr5 61467542 61467615 -141617917 + L1P5 LINE L1 5705 5778 -373 253 106 0 0 chr5 61467615 61467662 -141617870 + LTR66 LTR ERVL 392 438 -172 313 298 0 0 chr5 61467669 61467753 -141617779 - L1MC4 LINE L1 -1339 6703 6620 307 232 0 53 chr5 61467671 61467766 -141617766 + L1MC4 LINE L1 6614 6703 -1339 * 2779 84 0 3 chr5 61467825 61468195 -141617337 + L1PB1 LINE L1 5783 6151 0 253 129 97 113 chr5 61468200 61468262 -141617270 - MLT1D LTR MaLR -444 61 1 572 328 48 27 chr5 61469524 61469966 -141615566 + L2 LINE L2 2804 3254 -59 205 219 82 27 chr5 61471565 61471638 -141613894 + L2 LINE L2 3196 3272 0 243 217 25 124 chr5 61471907 61471925 -141613607 + MIR3 SINE MIR 79 97 -111 1184 177 5 5 chr5 61471925 61472134 -141613398 - MER3 DNA MER1_type 0 209 1 243 217 25 124 chr5 61472134 61472221 -141613311 + MIR3 SINE MIR 97 187 -21 309 328 62 11 chr5 61472594 61472771 -141612761 + MIR3 SINE MIR 17 202 -6 417 314 101 24 chr5 61473682 61473889 -141611643 - MIR SINE MIR -19 243 21 1264 177 27 0 chr5 61473973 61474193 -141611339 - MLT1D LTR MaLR 0 505 280 581 215 0 0 chr5 61474183 61474290 -141611242 - MLT1D LTR MaLR -398 107 1 * 2476 81 3 0 chr5 61475238 61475548 -141609984 - AluSp SINE Alu -2 311 1 325 307 18 9 chr5 61476259 61476373 -141609159 + MIR SINE MIR 88 202 -60 25 75 0 0 chr5 61476781 61476834 -141608698 + AT_rich Low_complexity Low_complexity 1 53 0 308 267 20 0 chr5 61476849 61476950 -141608582 + (TA)n Simple_repeat Simple_repeat 1 103 0 455 271 42 21 chr5 61477750 61477894 -141607638 + MIR3 SINE MIR 17 163 -45 1828 214 116 51 chr5 61478050 61478634 -141606898 + MLT1E3 LTR MaLR 3 624 0 428 257 55 14 chr5 61479417 61479560 -141605972 + MIR SINE MIR 19 170 -74 1685 170 28 7 chr5 61480043 61480326 -141605206 + AluJb SINE Alu 1 289 -23 2305 92 0 7 chr5 61480335 61480628 -141604904 + AluSq SINE Alu 1 291 -22 180 229 21 21 chr5 61481016 61481064 -141604468 + MIR SINE MIR 87 134 -74 254 206 397 0 chr5 61481182 61481308 -141604224 - MER5A DNA MER1_type -1 188 13 1182 197 66 71 chr5 61481399 61481503 -141604029 + L1MB7 LINE L1 5822 5925 -259 2511 4 0 0 chr5 61481503 61481768 -141603764 - AluYa5 SINE Alu -7 304 40 1182 197 66 71 chr5 61481768 61482028 -141603504 + L1MB7 LINE L1 5925 6184 0 898 182 29 0 chr5 61482541 61482711 -141602821 + MER5A DNA MER1_type 14 188 -1 225 0 0 0 chr5 61482735 61482760 -141602772 + (CA)n Simple_repeat Simple_repeat 1 25 0 292 309 0 0 chr5 61482827 61482921 -141602611 - MER117 DNA MER1_type -4 193 100 364 326 48 20 chr5 61484000 61484147 -141601385 - MIR3 SINE MIR -39 169 19 222 161 71 0 chr5 61484979 61485035 -141600497 + (CTGTG)n Simple_repeat Simple_repeat 3 62 0 234 273 109 9 chr5 61487585 61487695 -141597837 + MLT1L LTR MaLR 152 272 -343 431 313 157 8 chr5 61487723 61487972 -141597560 + MLT1L LTR MaLR 330 615 0 364 209 70 52 chr5 61489119 61489234 -141596298 + MER5B DNA MER1_type 5 121 -57 250 288 42 0 chr5 61489340 61489425 -141596107 + MIR SINE MIR 60 153 -63 281 282 165 16 chr5 61490010 61490198 -141595334 - MIR SINE MIR 0 262 47 364 250 125 0 chr5 61496218 61496338 -141589194 + MIR SINE MIR 1 135 -127 396 132 176 0 chr5 61496344 61496412 -141589120 - MADE1 DNA Mariner 0 80 1 184 267 17 17 chr5 61496412 61496472 -141589060 + MIR SINE MIR 203 262 0 438 326 6 66 chr5 61496735 61496871 -141588661 + MIR3 SINE MIR 30 154 -54 985 201 0 46 chr5 61496871 61497090 -141588442 + MER3 DNA MER1_type 1 209 0 438 326 6 66 chr5 61497090 61497134 -141588398 + MIR3 SINE MIR 154 199 -9 481 312 32 0 chr5 61497395 61497581 -141587951 - MIR SINE MIR -39 223 32 459 235 81 72 chr5 61497588 61497809 -141587723 - L1ME3A LINE L1 0 6170 5948 437 283 9 0 chr5 61497956 61498069 -141587463 - L2 LINE L2 0 3313 3200 1276 277 115 12 chr5 61499885 61500400 -141585132 - L2 LINE L2 0 3313 2742 204 353 10 20 chr5 61500831 61500933 -141584599 + L2 LINE L2 2943 3043 -229 404 227 86 29 chr5 61501737 61501882 -141583650 + MIR SINE MIR 40 191 -71 2300 96 7 0 chr5 61501886 61502179 -141583353 + AluSg SINE Alu 1 295 -15 1293 274 94 11 chr5 61502784 61503305 -141582227 + L1ME4a LINE L1 5293 5856 -265 664 286 65 33 chr5 61503994 61504239 -141581293 + MIR SINE MIR 8 260 -2 1165 246 122 25 chr5 61504280 61504732 -141580800 - MLT1F1 LTR MaLR -78 489 1 2561 123 65 4 chr5 61504943 61505370 -141580162 + MER1A DNA MER1_type 2 529 0 216 0 0 0 chr5 61505768 61505792 -141579740 + (A)n Simple_repeat Simple_repeat 1 24 0 245 164 211 39 chr5 61505934 61506038 -141579494 + L1ME1 LINE L1 4519 4640 -1506 1254 143 124 27 chr5 61506045 61506304 -141579228 - MSTA LTR MaLR 0 428 145 4520 82 38 71 chr5 61506451 61507249 -141578283 + Tigger3(Golem) DNA MER2_type 2259 3029 0 985 230 92 5 chr5 61507258 61507314 -141578218 + L1ME3 LINE L1 4851 4901 -1245 597 100 0 0 chr5 61507314 61507394 -141578138 - MADE1 DNA Mariner 0 80 1 985 230 92 5 chr5 61507394 61507707 -141577825 + L1ME3 LINE L1 4901 5252 -894 2247 225 44 63 chr5 61507804 61508690 -141576842 + L1ME3 LINE L1 5257 6125 -37 9633 167 16 4 chr5 61508892 61510524 -141575008 - MSTA-int LTR MaLR 0 1651 1 2244 149 73 27 chr5 61510524 61510933 -141574599 - MSTA LTR MaLR 0 428 1 558 238 42 26 chr5 61510935 61511128 -141574404 + L1ME1 LINE L1 4637 4832 -1314 1649 134 65 34 chr5 61511149 61511343 -141574189 + Tigger3(Golem) DNA MER2_type 1 208 -2821 1635 202 7 3 chr5 61511343 61511640 -141573892 + AluJo SINE Alu 1 298 -14 1649 134 65 34 chr5 61511640 61511737 -141573795 + Tigger3(Golem) DNA MER2_type 208 301 -2728 280 232 24 120 chr5 61512140 61512265 -141573267 + MARNA DNA Mariner 161 273 -313 184 230 0 48 chr5 61513835 61513961 -141571571 + GA-rich Low_complexity Low_complexity 2 121 0 239 215 7 47 chr5 61514013 61514162 -141571370 + GA-rich Low_complexity Low_complexity 2 144 0 428 206 24 18 chr5 61514178 61514343 -141571189 + GA-rich Low_complexity Low_complexity 1 166 0 1513 212 64 67 chr5 61514664 61514890 -141570642 + L1ME1 LINE L1 5440 5666 -500 2377 110 0 0 chr5 61514890 61515200 -141570332 + AluSg SINE Alu 1 310 0 1513 212 64 67 chr5 61515200 61515379 -141570153 + L1ME1 LINE L1 5666 5844 -322 447 281 85 18 chr5 61515403 61515567 -141569965 - MIR SINE MIR -50 212 38 189 213 0 0 chr5 61517437 61517484 -141568048 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 207 286 13 0 chr5 61517522 61517599 -141567933 + (TA)n Simple_repeat Simple_repeat 2 79 0 786 230 123 84 chr5 61517622 61518411 -141567121 - L2 LINE L2 0 3313 2485 326 292 102 15 chr5 61518528 61518665 -141566867 - MIR SINE MIR -12 250 102 488 307 6 6 chr5 61520081 61520237 -141565295 - MIR SINE MIR -70 138 34 1877 148 61 37 chr5 61520323 61520702 -141564830 - MLT1B LTR MaLR -2 388 1 22 70 0 0 chr5 61520743 61520786 -141564746 + AT_rich Low_complexity Low_complexity 1 43 0 1834 146 0 73 chr5 61520841 61521170 -141564362 - AluJb SINE Alu -7 305 1 259 262 12 24 chr5 61521382 61521466 -141564066 - L2 LINE L2 -173 3099 3017 180 0 0 0 chr5 61521841 61521861 -141563671 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2113 118 4 0 chr5 61521862 61522141 -141563391 - AluSx SINE Alu -32 280 1 243 298 53 26 chr5 61522408 61522522 -141563010 + L2 LINE L2 2936 3052 -261 379 279 184 11 chr5 61522739 61522918 -141562614 + MIR SINE MIR 34 243 -19 425 317 39 63 chr5 61523108 61523439 -141562093 - LTR67 LTR ERVL 0 557 235 2208 105 0 3 chr5 61523488 61523774 -141561758 + AluSp SINE Alu 1 285 -28 198 0 0 0 chr5 61523774 61523796 -141561736 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 255 291 0 25 chr5 61523817 61523896 -141561636 - LTR67 LTR ERVL -367 190 114 523 209 129 0 chr5 61524467 61524606 -141560926 - MER103 DNA DNA -2 164 8 399 190 190 35 chr5 61524813 61524963 -141560569 + MER5A DNA MER1_type 4 180 -9 239 313 51 40 chr5 61525582 61525758 -141559774 + MIR SINE MIR 47 224 -38 15148 114 29 41 chr5 61526645 61527048 -141558484 - Tigger1 DNA MER2_type 0 2418 2012 2200 128 0 0 chr5 61527048 61527344 -141558188 - AluSx SINE Alu -16 296 1 15148 114 29 41 chr5 61527344 61528341 -141557191 - Tigger1 DNA MER2_type -406 2012 1004 2529 77 0 0 chr5 61528341 61528651 -141556881 + AluY SINE Alu 1 310 -1 15148 114 29 41 chr5 61528651 61528815 -141556717 - Tigger1 DNA MER2_type -1414 1004 839 2018 139 0 10 chr5 61528815 61529118 -141556414 - AluSx SINE Alu -6 306 7 15148 114 29 41 chr5 61529118 61529999 -141555533 - Tigger1 DNA MER2_type -1579 839 1 377 194 84 52 chr5 61530232 61530363 -141555169 + MER5A DNA MER1_type 1 136 -53 280 273 8 66 chr5 61532718 61532839 -141552693 - L2 LINE L2 -5 3267 3154 556 234 19 40 chr5 61532897 61533072 -141552460 + MIR SINE MIR 37 206 -56 1977 101 4 0 chr5 61533654 61533911 -141551621 + AluSx SINE Alu 5 262 -50 211 300 91 27 chr5 61535045 61535155 -141550377 - MIR3 SINE MIR -14 194 78 204 135 0 0 chr5 61535652 61535689 -141549843 + (CA)n Simple_repeat Simple_repeat 1 37 0 773 262 111 83 chr5 61536315 61536642 -141548890 - LTR16C LTR ERVL -8 483 138 2319 110 0 3 chr5 61536642 61536951 -141548581 - AluSg SINE Alu -2 308 1 773 262 111 83 chr5 61536951 61537093 -141548439 - LTR16C LTR ERVL -353 138 1 201 389 40 16 chr5 61537144 61537270 -141548262 - L2 LINE L2 -8 3264 3136 732 244 70 14 chr5 61539325 61539538 -141545994 + MIR SINE MIR 37 261 -1 208 210 62 0 chr5 61539672 61539753 -141545779 + (TTTA)n Simple_repeat Simple_repeat 2 87 0 2618 131 9 16 chr5 61541194 61541245 -141544287 + L1MA2 LINE L1 4450 4500 -1646 2652 99 6 0 chr5 61541245 61541598 -141543934 - THE1A LTR MaLR 0 355 1 2618 131 9 16 chr5 61541598 61541988 -141543544 + L1MA2 LINE L1 4500 4888 -1258 3474 109 8 10 chr5 61541988 61542495 -141543037 + L1MA2 LINE L1 5783 6304 0 236 232 143 27 chr5 61543090 61543202 -141542330 + LTR16A1 LTR ERVL 333 457 0 289 248 161 0 chr5 61544227 61544364 -141541168 + LTR16A1 LTR ERVL 299 457 0 681 232 72 14 chr5 61545426 61545633 -141539899 + MIR SINE MIR 33 251 -11 416 203 78 9 chr5 61545995 61546110 -141539422 + MIR SINE MIR 32 153 -55 347 0 23 0 chr5 61548336 61548379 -141537153 + (CA)n Simple_repeat Simple_repeat 2 45 0 666 274 154 31 chr5 61548762 61549227 -141536305 + MLT1G1 LTR MaLR 1 489 -66 912 164 29 13 chr5 61549341 61549552 -141535980 - MER51A LTR ERV1 0 640 429 517 254 50 132 chr5 61549968 61550044 -141535488 - L2 LINE L2 -8 3264 3183 1551 203 0 16 chr5 61550044 61550349 -141535183 + AluJo SINE Alu 1 300 -12 517 254 50 132 chr5 61550349 61550552 -141534980 - L2 LINE L2 -89 3183 3008 1081 283 59 35 chr5 61551173 61552211 -141533321 - L1ME3 LINE L1 -216 5946 4878 367 283 112 83 chr5 61552557 61552896 -141532636 - HAL1b LINE L1 -619 729 381 240 286 85 46 chr5 61553010 61553293 -141532239 - HAL1 LINE L1 -1101 1406 1113 22 35 0 0 chr5 61553505 61553534 -141531998 + AT_rich Low_complexity Low_complexity 1 29 0 182 320 0 0 chr5 61554398 61554448 -141531084 + L3b LINE CR1 1175 1224 -359 247 341 49 0 chr5 61554628 61554751 -141530781 - MIR SINE MIR 0 262 134 631 286 143 54 chr5 61554754 61555180 -141530352 - L2 LINE L2 0 3313 2850 1751 139 0 4 chr5 61555309 61555561 -141529971 - AluSx SINE Alu -61 251 1 216 250 0 17 chr5 61555640 61555700 -141529832 - L2 LINE L2 -604 2710 2652 567 29 0 0 chr5 61555981 61556050 -141529482 + (CA)n Simple_repeat Simple_repeat 2 70 0 22 0 0 0 chr5 61556726 61556748 -141528784 + AT_rich Low_complexity Low_complexity 1 22 0 397 204 70 102 chr5 61557334 61557520 -141528012 - L1ME4a LINE L1 -3 6118 5939 6401 86 43 22 chr5 61557544 61559132 -141526400 - L1PA14 LINE L1 -4 6157 4603 2208 125 21 56 chr5 61559132 61559509 -141526023 + THE1B LTR MaLR 1 364 0 12827 84 4 4 chr5 61559509 61561088 -141524444 + THE1B-int LTR MaLR 1 1580 0 2156 130 21 56 chr5 61561088 61561465 -141524067 + THE1B LTR MaLR 1 364 0 6401 86 43 22 chr5 61561465 61561597 -141523935 - L1PA14 LINE L1 -1557 4604 4400 1674 49 5 0 chr5 61561597 61561801 -141523731 - L1P3 LINE L1 -341 5813 5609 * 1975 241 2 12 chr5 61561797 61562316 -141523216 - L1P LINE L1 -2957 3189 2676 312 232 238 6 chr5 61562296 61562464 -141523068 - L1ME4a LINE L1 -202 5919 5713 * 302 195 24 85 chr5 61562585 61562667 -141522865 - L2 LINE L2 -605 2709 2633 210 261 92 0 chr5 61563207 61563272 -141522260 + MER91C DNA MER1_type 36 106 -34 2039 265 54 60 chr5 61563478 61564942 -141520590 + L1MCc LINE L1 859 2522 -4600 29 0 0 25 chr5 61564976 61564998 -141520534 + AT_rich Low_complexity Low_complexity 1 23 -16 2158 89 11 0 chr5 61564998 61565278 -141520254 - AluSc SINE Alu -26 283 1 29 0 0 25 chr5 61565278 61565295 -141520237 + AT_rich Low_complexity Low_complexity 23 39 0 963 280 89 52 chr5 61565309 61565748 -141519784 + LTR16A1 LTR ERVL 3 457 0 523 258 94 41 chr5 61565755 61565999 -141519533 - L1M4 LINE L1 -2098 4048 3792 841 199 86 0 chr5 61566735 61566886 -141518646 - FRAM SINE Alu -12 164 1 2870 10 0 0 chr5 61567340 61567651 -141517881 - AluY SINE Alu 0 311 1 198 300 29 29 chr5 61568131 61568201 -141517331 - MIR3 SINE MIR -3 205 136 224 318 112 47 chr5 61570650 61570864 -141514668 + L2 LINE L2 3084 3311 -2 1947 145 43 38 chr5 61571380 61571753 -141513779 + THE1C LTR MaLR 1 375 0 182 247 210 0 chr5 61571959 61572040 -141513492 + MIR3 SINE MIR 84 181 -27 1265 237 56 30 chr5 61572526 61572922 -141512610 + MLT1J1 LTR MaLR 41 446 0 26 50 0 0 chr5 61573723 61573763 -141511769 + AT_rich Low_complexity Low_complexity 1 40 0 354 165 174 87 chr5 61574258 61574353 -141511179 + MIR SINE MIR 34 142 -120 1661 165 26 26 chr5 61574353 61574662 -141510870 + AluJo SINE Alu 1 309 -3 354 165 174 87 chr5 61574662 61574681 -141510851 + MIR SINE MIR 142 158 -104 228 222 0 0 chr5 61574675 61574720 -141510812 + L2 LINE L2 3257 3301 -12 * 308 340 0 0 chr5 61574730 61574827 -141510705 + 5S rRNA rRNA 7 103 -18 2347 97 3 0 chr5 61575127 61575426 -141510106 + AluSp SINE Alu 1 300 -13 293 256 311 13 chr5 61577400 61577576 -141507956 + MIR SINE MIR 21 243 -19 1285 21 0 0 chr5 61577744 61577887 -141507645 - AluY SINE Alu -13 298 156 23 33 0 0 chr5 61579168 61579198 -141506334 + AT_rich Low_complexity Low_complexity 1 30 0 330 288 199 7 chr5 61579321 61579467 -141506065 - MIR SINE MIR -8 254 81 252 0 0 0 chr5 61579595 61579623 -141505909 + (CA)n Simple_repeat Simple_repeat 1 28 0 3087 235 18 13 chr5 61579926 61580599 -141504933 + MER63C DNA MER1_type 253 928 -2 3164 153 31 21 chr5 61582274 61582789 -141502743 + MLT2B1 LTR ERVL 1 520 0 1046 126 6 33 chr5 61583735 61583917 -141501615 + L1MC1 LINE L1 5909 6085 -248 1025 193 232 14 chr5 61583917 61584202 -141501330 + MER47A DNA MER2_type 20 366 0 1471 109 5 0 chr5 61584202 61584404 -141501128 + L1MC1 LINE L1 6082 6284 -49 186 43 0 0 chr5 61584724 61584747 -141500785 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 264 281 31 10 chr5 61585460 61585556 -141499976 + L2 LINE L2 2688 2785 -529 426 328 0 30 chr5 61585907 61586038 -141499494 + MIR SINE MIR 21 147 -115 286 291 123 23 chr5 61586157 61586377 -141499155 + L2 LINE L2 2688 2929 -385 202 272 266 72 chr5 61586560 61587049 -141498483 - L3 LINE CR1 -129 1448 865 191 353 15 15 chr5 61587064 61587132 -141498400 - MIR SINE MIR -110 98 31 356 224 163 54 chr5 61587195 61587342 -141498190 - MIR SINE MIR 0 262 100 447 322 8 0 chr5 61588728 61588846 -141496686 - L2 LINE L2 0 3272 3154 1731 219 72 52 chr5 61588879 61589417 -141496115 - MER74B LTR ERVL -18 604 56 285 246 30 82 chr5 61589418 61589552 -141495980 - LTR33A LTR ERVL 0 523 397 858 255 118 71 chr5 61590479 61590930 -141494602 - MLT1K LTR MaLR -1 475 4 2364 77 0 7 chr5 61592075 61592372 -141493160 + AluSq SINE Alu 1 295 -18 1094 318 93 53 chr5 61592886 61593733 -141491799 - L3 LINE CR1 -75 1502 622 249 241 76 0 chr5 61595722 61595801 -141489731 + L1ME4a LINE L1 5838 5922 -199 31 0 0 0 chr5 61595891 61595922 -141489610 + AT_rich Low_complexity Low_complexity 1 31 0 6359 111 30 13 chr5 61595922 61597508 -141488024 - L1PA16 LINE L1 -9 6157 4552 821 302 98 8 chr5 61597816 61598194 -141487338 - LTR33 LTR ERVL -51 470 59 54 62 0 0 chr5 61598776 61598872 -141486660 + AT_rich Low_complexity Low_complexity 1 96 0 1181 108 0 0 chr5 61598927 61599085 -141486447 - L1PB1 LINE L1 -1 6150 5993 328 186 0 0 chr5 61599085 61599144 -141486388 - L1 LINE L1 -1385 4761 4703 23 0 0 0 chr5 61599144 61599167 -141486365 + AT_rich Low_complexity Low_complexity 1 23 0 209 235 41 10 chr5 61599170 61599268 -141486264 + (TTATA)n Simple_repeat Simple_repeat 3 103 0 620 200 5 97 chr5 61599377 61599572 -141485960 + MER96B DNA MER1_type? 241 417 0 304 270 34 11 chr5 61599911 61600000 -141485532 - MIR3 SINE MIR -1 207 117 342 267 176 8 chr5 61601633 61601764 -141483768 + MIR3 SINE MIR 33 185 -23 320 301 39 39 chr5 61601856 61602062 -141483470 + L1MB1 LINE L1 5793 5998 -170 * 1088 227 17 48 chr5 61601890 61602185 -141483347 + L1ME2 LINE L1 5834 6119 -45 299 300 50 0 chr5 61602191 61602311 -141483221 + L1MC4 LINE L1 7916 8041 -1 427 118 0 15 chr5 61602689 61602757 -141482775 + MSTC LTR MaLR 307 373 -55 216 0 0 0 chr5 61603252 61603276 -141482256 + (TG)n Simple_repeat Simple_repeat 1 24 0 224 281 16 16 chr5 61603421 61603485 -141482047 - MIR3 SINE MIR -32 176 113 384 296 9 9 chr5 61603551 61603666 -141481866 - MIR3 SINE MIR -23 185 71 2020 114 22 0 chr5 61603880 61604153 -141481379 - AluSx SINE Alu -33 279 1 1956 233 119 81 chr5 61604417 61605187 -141480345 - L2 LINE L2 -25 3288 2549 2511 114 57 47 chr5 61605187 61605376 -141480156 + MSTA LTR MaLR 1 187 -241 2308 86 10 0 chr5 61605376 61605668 -141479864 + AluSp SINE Alu 1 295 -18 2511 114 57 47 chr5 61605668 61605900 -141479632 + MSTA LTR MaLR 187 426 -2 1956 233 119 81 chr5 61605900 61606180 -141479352 - L2 LINE L2 -764 2549 2281 247 97 0 0 chr5 61606180 61606211 -141479321 - MSTB LTR MaLR -70 356 326 1956 233 119 81 chr5 61606211 61606412 -141479120 - L2 LINE L2 -1032 2281 1958 2259 95 0 17 chr5 61606524 61606820 -141478712 + AluSq SINE Alu 1 291 -22 545 261 64 0 chr5 61606889 61607046 -141478486 + MER117 DNA MER1_type 22 188 -9 362 251 101 27 chr5 61607048 61607248 -141478284 - MIR SINE MIR -39 223 6 21 0 0 0 chr5 61609912 61609933 -141475599 + AT_rich Low_complexity Low_complexity 1 21 0 1093 289 56 5 chr5 61610268 61610651 -141474881 + L1ME3A LINE L1 5542 5956 -214 260 298 106 19 chr5 61613166 61613270 -141472262 + L2 LINE L2 3136 3248 -24 182 73 171 0 chr5 61614397 61614438 -141471094 - L3b LINE CR1 0 1583 1536 437 300 13 67 chr5 61614934 61614978 -141470554 - MIR SINE MIR -119 143 98 2112 176 20 6 chr5 61614978 61615336 -141470196 + MLT1A1 LTR MaLR 1 363 -2 437 300 13 67 chr5 61615336 61615441 -141470091 - MIR SINE MIR -164 98 2 200 271 73 86 chr5 61615475 61615626 -141469906 + L2 LINE L2 2789 2937 -377 476 229 102 24 chr5 61615786 61615952 -141469580 + LTR16C LTR ERVL 313 491 0 2502 170 62 2 chr5 61616701 61617153 -141468379 - L1MB2 LINE L1 -3 6168 5690 822 221 34 29 chr5 61617470 61617678 -141467854 + MIR SINE MIR 46 254 -8 195 200 167 0 chr5 61617692 61617752 -141467780 - MIR3 SINE MIR -39 169 100 880 187 7 7 chr5 61618574 61618752 -141466780 - FRAM SINE Alu 0 178 1 1239 214 86 44 chr5 61618897 61619303 -141466229 + MER74B LTR ERVL 125 547 -75 262 204 97 21 chr5 61619223 61619316 -141466216 - MER88 LTR ERVL -286 178 79 * 318 313 0 106 chr5 61619424 61619622 -141465910 + MER5B DNA MER1_type 2 178 0 552 236 130 19 chr5 61620242 61620450 -141465082 + MIR SINE MIR 21 251 -11 231 36 0 0 chr5 61621465 61621493 -141464039 + (CTG)n Simple_repeat Simple_repeat 2 29 0 338 289 161 50 chr5 61621888 61622068 -141463464 - MIR3 SINE MIR -3 205 6 508 273 87 0 chr5 61622537 61622709 -141462823 - MIR SINE MIR -50 212 26 180 26 26 51 chr5 61624540 61624579 -141460953 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1673 135 67 11 chr5 61624797 61625101 -141460431 + AluJo SINE Alu 1 319 0 388 221 58 105 chr5 61625793 61625983 -141459549 + MER113 DNA MER1_type? 30 210 -311 2272 41 44 0 chr5 61626192 61626494 -141459038 + AluY SINE Alu 1 314 0 496 290 5 78 chr5 61626778 61626971 -141458561 - MLT1J LTR MaLR -97 414 236 451 272 121 25 chr5 61627104 61627315 -141458217 - MLT1F LTR MaLR -362 231 1 237 296 64 56 chr5 61627435 61627542 -141457990 + Tigger8 DNA MER2_type 115 225 -441 595 77 13 0 chr5 61627542 61627620 -141457912 - MADE1 DNA Mariner -1 79 1 237 296 64 56 chr5 61627620 61627637 -141457895 + Tigger8 DNA MER2_type 225 240 -426 714 264 76 49 chr5 61627798 61628166 -141457366 + Tigger8 DNA MER2_type 227 604 -62 372 250 86 46 chr5 61628279 61628431 -141457101 + Charlie8 DNA MER1_type 19 176 -2241 996 138 26 62 chr5 61628565 61628628 -141456904 - MER5A DNA MER1_type 0 189 125 2099 112 0 56 chr5 61628628 61628951 -141456581 + AluSx SINE Alu 1 305 -7 996 138 26 62 chr5 61628951 61629082 -141456450 - MER5A DNA MER1_type -64 125 2 414 294 88 26 chr5 61629171 61629365 -141456167 + MIR SINE MIR 57 262 0 235 287 25 96 chr5 61629363 61629520 -141456012 + L2 LINE L2 3168 3313 0 * 814 286 88 47 chr5 61629808 61630273 -141455259 - MLT1J LTR MaLR -2 509 26 321 26 0 0 chr5 61630305 61630343 -141455189 + (CA)n Simple_repeat Simple_repeat 1 38 0 404 230 32 63 chr5 61631933 61632059 -141453473 - L2 LINE L2 0 3272 3151 445 278 88 82 chr5 61632614 61633002 -141452530 + Charlie8 DNA MER1_type 37 426 -1991 785 219 57 79 chr5 61633016 61633331 -141452201 - L2 LINE L2 -1 3312 3005 363 232 98 9 chr5 61633348 61633460 -141452072 + Charlie8 DNA MER1_type 433 554 -1863 251 306 50 62 chr5 61633597 61633757 -141451775 - MIR SINE MIR -67 195 38 310 357 39 34 chr5 61635219 61635600 -141449932 + L2 LINE L2 2557 2939 -375 426 243 52 69 chr5 61636236 61636371 -141449161 - MIR SINE MIR 0 262 129 1724 260 88 7 chr5 61636371 61636825 -141448707 + LTR16C LTR ERVL 1 491 0 426 243 52 69 chr5 61636825 61636862 -141448670 - MIR SINE MIR -133 129 93 2099 138 0 0 chr5 61637741 61638031 -141447501 + AluSx SINE Alu 1 290 -22 280 341 12 12 chr5 61638094 61638179 -141447353 - MIR3 SINE MIR -115 93 9 2254 95 0 0 chr5 61638545 61638862 -141446670 - AluY SINE Alu 0 317 1 13422 195 18 9 chr5 61639233 61639757 -141445775 + L1PA16 LINE L1 2225 2743 -3423 2825 7 0 0 chr5 61639757 61640057 -141445475 + AluYb8 SINE Alu 16 315 -3 13422 195 18 9 chr5 61640057 61643429 -141442103 + L1PA16 LINE L1 2743 6157 -9 2204 127 0 0 chr5 61643581 61643888 -141441644 + AluSx SINE Alu 1 307 -5 750 315 40 4 chr5 61644304 61644402 -141441130 - MIR SINE MIR 0 262 169 186 43 0 0 chr5 61644402 61644425 -141441107 + (ATG)n Simple_repeat Simple_repeat 2 24 0 750 315 40 4 chr5 61644425 61644577 -141440955 - MIR SINE MIR -93 169 3 2254 98 0 0 chr5 61646131 61646416 -141439116 + AluSx SINE Alu 21 305 -7 2577 55 13 0 chr5 61646770 61647077 -141438455 + AluSp SINE Alu 1 311 -2 210 306 0 0 chr5 61647158 61647220 -141438312 + A-rich Low_complexity Low_complexity 2 63 0 2343 92 0 0 chr5 61647767 61648062 -141437470 - AluSc SINE Alu -14 295 1 405 209 76 111 chr5 61649498 61649681 -141435851 - L1ME4a LINE L1 -16 6105 5936 369 0 0 0 chr5 61649681 61649722 -141435810 + (TA)n Simple_repeat Simple_repeat 2 42 0 405 209 76 111 chr5 61649722 61649854 -141435678 - L1ME4a LINE L1 -185 5936 5801 2160 109 3 3 chr5 61653092 61653394 -141432138 - AluSc SINE Alu -7 302 1 351 291 76 36 chr5 61653694 61653917 -141431615 - L1MEd LINE L1 -5557 562 331 23 78 0 0 chr5 61654255 61654306 -141431226 + AT_rich Low_complexity Low_complexity 1 51 0 3139 71 32 27 chr5 61655257 61655591 -141429941 - L1P3 LINE L1 -430 5724 5393 2529 69 3 0 chr5 61655591 61655923 -141429609 - L1PA6 LINE L1 0 6154 5822 3139 71 32 27 chr5 61655923 61656324 -141429208 - L1P3 LINE L1 -761 5393 4996 2844 42 0 0 chr5 61656342 61656697 -141428835 + L1PA7 LINE L1 5767 6121 -33 47 61 0 0 chr5 61656894 61656976 -141428556 + AT_rich Low_complexity Low_complexity 1 82 0 405 241 36 0 chr5 61658161 61658273 -141427259 - MIR SINE MIR -54 208 93 * 760 285 101 17 chr5 61658265 61658553 -141426979 + L2 LINE L2 3002 3313 0 193 314 70 47 chr5 61658543 61658629 -141426903 - MIR SINE MIR -146 116 29 * 1799 194 25 6 chr5 61658659 61659015 -141426517 - MLT1A1 LTR MaLR -1 364 2 215 408 0 10 chr5 61659162 61659265 -141426267 + MIR SINE MIR 42 143 -65 31 44 0 0 chr5 61659354 61659399 -141426133 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr5 61660408 61660430 -141425102 + (A)n Simple_repeat Simple_repeat 1 22 0 542 253 11 81 chr5 61662293 61662359 -141423173 - MER5B DNA MER1_type 0 178 109 7140 50 4 7 chr5 61662359 61663345 -141422187 + L1PA6 LINE L1 5171 6154 0 542 253 11 81 chr5 61663345 61663463 -141422069 - MER5B DNA MER1_type -69 109 7 296 271 221 0 chr5 61663463 61663603 -141421929 - MER5A DNA MER1_type 0 189 19 218 293 17 0 chr5 61664604 61664662 -141420870 + L2 LINE L2 3242 3300 -13 23 0 0 0 chr5 61666568 61666591 -141418941 + AT_rich Low_complexity Low_complexity 1 23 0 527 296 114 11 chr5 61668339 61668515 -141417017 - MER91A DNA MER1_type 0 196 3 476 335 17 25 chr5 61669504 61669697 -141415835 - MIR SINE MIR -71 191 5 3252 159 17 28 chr5 61669988 61670348 -141415184 - L1PA16 LINE L1 -20 6146 5795 2185 116 10 0 chr5 61670348 61670651 -141414881 - AluSx SINE Alu -6 306 1 3252 159 17 28 chr5 61670651 61670925 -141414607 - L1PA16 LINE L1 -371 5795 5519 24 53 0 0 chr5 61671338 61671376 -141414156 + AT_rich Low_complexity Low_complexity 1 38 0 325 247 52 10 chr5 61671731 61671828 -141413704 + L1ME LINE L1 5614 5714 -456 3815 182 38 33 chr5 61671934 61672037 -141413495 + L1MB4 LINE L1 5191 5292 -888 294 29 0 0 chr5 61672037 61672072 -141413460 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 3815 182 38 33 chr5 61672072 61672845 -141412687 + L1MB4 LINE L1 5292 6076 -104 2270 123 0 0 chr5 61672845 61673146 -141412386 + AluSx SINE Alu 1 301 -11 3815 182 38 33 chr5 61673146 61673251 -141412281 + L1MB4 LINE L1 6076 6179 -1 266 256 128 0 chr5 61673562 61673648 -141411884 - MER5A DNA MER1_type -88 101 5 213 39 0 0 chr5 61674035 61674061 -141411471 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 353 109 16 0 chr5 61674062 61674126 -141411406 + (TTC)n Simple_repeat Simple_repeat 3 67 0 6006 57 3 7 chr5 61674642 61675411 -141410121 + L1PA7 LINE L1 5381 6146 -8 571 258 158 23 chr5 61675513 61675734 -141409798 - MIR SINE MIR -4 258 8 2361 206 132 56 chr5 61676664 61677596 -141407936 - Charlie1 DNA MER1_type -455 2306 1 224 244 0 0 chr5 61678590 61678635 -141406897 - MIR SINE MIR -119 143 99 236 323 47 39 chr5 61679792 61679919 -141405613 - L2 LINE L2 -10 3303 3176 234 242 242 0 chr5 61679939 61680067 -141405465 - MIR SINE MIR -15 247 89 1588 288 74 15 chr5 61680583 61681181 -141404351 + HERV16 LTR ERVL 814 1446 -3550 476 285 15 0 chr5 61681325 61681462 -141404070 + HERV16 LTR ERVL 1686 1824 -3172 * 661 318 16 43 chr5 61681446 61681690 -141403842 + HERV16 LTR ERVL 2933 3169 -2485 1353 182 33 97 chr5 61681690 61682080 -141403452 - MLT1A1 LTR MaLR 0 365 1 661 318 16 43 chr5 61682080 61682140 -141403392 + HERV16 LTR ERVL 3169 3229 -2425 222 288 17 0 chr5 61682528 61682587 -141402945 - MIR3 SINE MIR 0 208 149 390 290 148 21 chr5 61682659 61682997 -141402535 + MLT1L LTR MaLR 220 600 -15 361 344 55 16 chr5 61683004 61683132 -141402400 - MIR3 SINE MIR -39 169 37 205 191 0 24 chr5 61683666 61683708 -141401824 + MIR SINE MIR 21 61 -147 421 247 17 103 chr5 61683716 61683890 -141401642 + LTR67 LTR ERVL 6 164 -393 1968 217 91 15 chr5 61683890 61684310 -141401222 + MLT2B1 LTR ERVL 1 462 -58 192 77 0 0 chr5 61684310 61684336 -141401196 + (TG)n Simple_repeat Simple_repeat 1 26 0 1968 217 91 15 chr5 61684336 61684389 -141401143 + MLT2B1 LTR ERVL 462 510 -10 416 296 24 0 chr5 61684636 61684761 -141400771 + L2 LINE L2 3185 3312 -1 4187 32 0 0 chr5 61684908 61685407 -141400125 + L1PA4 LINE L1 5657 6155 0 1087 214 34 0 chr5 61686016 61686254 -141399278 - MIR SINE MIR 0 262 17 2029 87 0 7 chr5 61686411 61686700 -141398832 - L1PA13 LINE L1 -470 5698 5412 2689 97 70 25 chr5 61686700 61687141 -141398391 + L1PA13 LINE L1 5683 6144 -19 329 157 157 22 chr5 61687162 61687251 -141398281 - L1ME4a LINE L1 -2 6119 6019 1755 138 6 28 chr5 61687482 61687802 -141397730 + L1MC1 LINE L1 6019 6331 -2 695 289 28 16 chr5 61687854 61688099 -141397433 - MIR SINE MIR -19 243 5 2371 80 0 3 chr5 61688948 61689260 -141396272 + AluY SINE Alu 1 311 0 415 209 232 36 chr5 61689311 61689721 -141395811 + MLT1H1 LTR MaLR 32 534 -8 429 302 71 42 chr5 61689724 61689921 -141395611 + L1ME4a LINE L1 5605 5816 -305 2293 70 11 3 chr5 61689921 61690205 -141395327 + AluSp SINE Alu 1 286 -27 429 302 71 42 chr5 61690205 61690315 -141395217 + L1ME4a LINE L1 5816 5921 -200 325 209 62 47 chr5 61690460 61690589 -141394943 - L1ME4a LINE L1 -5 6116 5986 515 262 115 11 chr5 61691009 61691200 -141394332 + MIR SINE MIR 8 218 -44 553 262 35 21 chr5 61691649 61691794 -141393738 - MIR SINE MIR -100 162 16 218 255 122 51 chr5 61691946 61692044 -141393488 - MER5B DNA MER1_type -18 160 56 1996 146 3 0 chr5 61694367 61694668 -141390864 + AluSx SINE Alu 3 304 -8 1895 125 89 0 chr5 61695971 61696252 -141389280 + AluSg SINE Alu 1 306 -4 2429 86 0 3 chr5 61696387 61696691 -141388841 - AluSg SINE Alu -7 303 1 1213 236 142 43 chr5 61697184 61697403 -141388129 - L1ME3A LINE L1 -4 6166 5970 1238 161 29 29 chr5 61697403 61697435 -141388097 - L1MB3 LINE L1 -8 6175 6144 2094 108 14 0 chr5 61697435 61697722 -141387810 - AluSc SINE Alu -18 291 1 1238 161 29 29 chr5 61697722 61697968 -141387564 - L1MB3 LINE L1 -38 6145 5897 1213 236 142 43 chr5 61697968 61698278 -141387254 - L1ME3A LINE L1 -200 5970 5585 283 234 122 43 chr5 61699569 61699704 -141385828 - MLT1J LTR MaLR 0 511 458 1236 236 126 3 chr5 61699704 61700005 -141385527 + MER58B DNA MER1_type 4 341 0 283 234 122 43 chr5 61700005 61700043 -141385489 - MLT1J LTR MaLR -53 458 424 1015 214 11 6 chr5 61704655 61704837 -141380695 - MER5A DNA MER1_type -5 184 2 1909 121 0 0 chr5 61705346 61705603 -141379929 + AluSg SINE Alu 35 291 -19 311 184 112 41 chr5 61705753 61705851 -141379681 - MIR SINE MIR -86 176 72 22 0 0 0 chr5 61707023 61707045 -141378487 + AT_rich Low_complexity Low_complexity 1 22 0 245 212 15 15 chr5 61707089 61707155 -141378377 + (CATATA)n Simple_repeat Simple_repeat 5 70 0 2170 79 4 7 chr5 61707196 61707476 -141378056 + AluY SINE Alu 1 279 -32 41526 65 8 5 chr5 61707644 61713775 -141371757 - L1PA5 LINE L1 -5 6149 2 789 299 12 29 chr5 61713776 61714017 -141371515 - MIR SINE MIR -4 258 22 305 412 46 13 chr5 61714122 61714275 -141371257 + L2 LINE L2 3111 3268 -4 672 120 0 74 chr5 61715036 61715144 -141370388 + AluJb SINE Alu 196 295 -17 252 282 70 0 chr5 61715668 61715739 -141369793 + MER5A DNA MER1_type 19 94 -95 * 491 259 184 0 chr5 61715729 61715876 -141369656 - MER5A DNA MER1_type -7 182 9 1973 125 4 4 chr5 61716345 61716668 -141368864 - AluSg SINE Alu 0 323 1 198 196 71 54 chr5 61716699 61716755 -141368777 + MIR SINE MIR 88 144 -118 962 180 21 37 chr5 61716819 61717008 -141368524 + MER5A DNA MER1_type 4 189 0 2193 123 0 0 chr5 61717191 61717493 -141368039 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr5 61717494 61717516 -141368016 + AT_rich Low_complexity Low_complexity 1 22 0 349 233 143 48 chr5 61717634 61717844 -141367688 + L1ME1 LINE L1 5254 5483 -2325 328 298 88 39 chr5 61717883 61718168 -141367364 + L1ME1 LINE L1 5565 5863 -303 523 130 20 50 chr5 61720497 61720597 -141364935 + AluJo SINE Alu 40 136 -176 492 317 40 5 chr5 61720815 61721017 -141364515 - L2 LINE L2 0 3313 3105 207 170 0 0 chr5 61721721 61721768 -141363764 + A-rich Low_complexity Low_complexity 1 47 0 233 283 0 0 chr5 61722126 61722179 -141363353 + L2 LINE L2 3220 3272 0 1222 97 0 0 chr5 61722250 61722404 -141363128 - AluSx SINE Alu -158 154 1 1094 159 6 11 chr5 61722404 61722586 -141362946 - MER20 DNA MER1_type -38 181 1 3820 27 23 5 chr5 61723149 61723589 -141361943 + LTR7 LTR ERV1 1 448 -2 313 275 132 93 chr5 61724112 61724490 -141361042 + L1M2 LINE L1 630 1022 -5827 2754 174 62 35 chr5 61725357 61725893 -141359639 + MER44D DNA MER2_type 1 605 0 2224 109 3 0 chr5 61726083 61726385 -141359147 - AluSp SINE Alu -10 303 1 921 226 155 4 chr5 61726492 61726744 -141358788 - MLT1A1 LTR MaLR -4 361 72 2762 81 3 24 chr5 61726749 61727096 -141358436 - L1PB1 LINE L1 -12 6139 5799 216 0 0 0 chr5 61727096 61727120 -141358412 + (TG)n Simple_repeat Simple_repeat 2 25 0 2762 81 3 24 chr5 61727120 61727143 -141358389 - L1PB1 LINE L1 -352 5799 5777 188 224 0 17 chr5 61727146 61727204 -141358328 + (TA)n Simple_repeat Simple_repeat 1 57 0 2290 70 44 16 chr5 61727232 61727547 -141357985 - L1PB1 LINE L1 -360 5791 5468 408 95 176 27 chr5 61727547 61727621 -141357911 - MLT1A1 LTR MaLR -343 85 1 2238 123 0 0 chr5 61727976 61728278 -141357254 + AluSx SINE Alu 1 302 -10 2118 139 0 0 chr5 61729293 61729594 -141355938 + AluSx SINE Alu 1 301 -11 1804 157 0 0 chr5 61730076 61730344 -141355188 + AluJb SINE Alu 26 293 -19 4383 165 47 54 chr5 61731022 61731086 -141354446 - L1MB7 LINE L1 -9 6175 6112 1458 164 20 55 chr5 61731086 61731378 -141354154 + AluJo SINE Alu 1 282 -30 186 43 0 0 chr5 61731380 61731403 -141354129 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 4383 165 47 54 chr5 61731403 61731447 -141354085 - L1MB7 LINE L1 -73 6111 6068 2724 22 0 10 chr5 61731447 61731759 -141353773 + AluY SINE Alu 1 309 -2 4383 165 47 54 chr5 61731759 61732720 -141352812 - L1MB7 LINE L1 -116 6068 5091 676 173 58 32 chr5 61732714 61732870 -141352662 - L1MB7 LINE L1 -1308 4838 4679 * 21 57 0 0 chr5 61732873 61732908 -141352624 + AT_rich Low_complexity Low_complexity 1 35 0 213 271 21 29 chr5 61733311 61733324 -141352208 + (TA)n Simple_repeat Simple_repeat 2 14 -126 2037 140 0 0 chr5 61733324 61733617 -141351915 + AluSx SINE Alu 1 293 -19 213 271 21 29 chr5 61733617 61733743 -141351789 + (TA)n Simple_repeat Simple_repeat 14 140 0 582 283 22 66 chr5 61735110 61735474 -141350058 + HAL1 LINE L1 2130 2477 -30 501 215 62 97 chr5 61736452 61736647 -141348885 + MER112 DNA MER1_type 1 188 -72 5883 30 0 1 chr5 61737119 61737810 -141347722 + L1P LINE L1 3403 4092 -2054 233 333 21 10 chr5 61738988 61739084 -141346448 + L2 LINE L2 3211 3307 -6 309 313 104 26 chr5 61739164 61739356 -141346176 + MIR SINE MIR 50 256 -6 343 296 90 58 chr5 61741892 61742081 -141343451 - MIR3 SINE MIR -11 197 3 1799 130 83 14 chr5 61742425 61742701 -141342831 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr5 61742870 61742898 -141342634 + AT_rich Low_complexity Low_complexity 1 28 0 1014 265 152 21 chr5 61743114 61743357 -141342175 - LTR16C LTR ERVL 0 491 281 971 215 39 24 chr5 61743357 61743562 -141341970 + MER63A DNA MER1_type 3 210 0 1014 265 152 21 chr5 61743562 61743752 -141341780 - LTR16C LTR ERVL -210 281 1 240 216 113 44 chr5 61743783 61743875 -141341657 - MIR SINE MIR -106 102 15 305 251 147 31 chr5 61743930 61744093 -141341439 - MLT1J1 LTR MaLR 0 446 265 361 234 72 14 chr5 61744144 61744303 -141341229 - MLT1J1 LTR MaLR -311 135 1 969 253 46 0 chr5 61744686 61744927 -141340605 + MIR SINE MIR 1 252 -10 232 314 99 25 chr5 61745541 61745662 -141339870 - L2 LINE L2 -20 3252 3123 199 299 10 62 chr5 61745689 61745786 -141339746 + L2 LINE L2 3197 3288 -25 911 283 133 11 chr5 61745787 61746140 -141339392 + Zaphod DNA AcHobo 1 396 -3635 889 224 68 23 chr5 61746159 61746467 -141339065 + Zaphod DNA AcHobo 530 851 -3180 1464 190 131 8 chr5 61746485 61746858 -141338674 + Zaphod DNA AcHobo 3609 4027 -4 225 213 43 0 chr5 61746988 61747035 -141338497 - L1M2b LINE L1 -6751 458 410 328 297 108 18 chr5 61747053 61747164 -141338368 + L2 LINE L2 3151 3271 -1 2240 127 47 26 chr5 61747336 61747676 -141337856 - MER7A DNA MER2_type 0 346 2 1232 172 109 40 chr5 61747811 61748113 -141337419 + MER33 DNA MER1_type 1 323 -1 1660 184 3 13 chr5 61748140 61748449 -141337083 - AluJo SINE Alu -6 306 1 22 70 0 0 chr5 61749689 61749732 -141335800 + AT_rich Low_complexity Low_complexity 1 43 0 200 246 31 46 chr5 61750359 61750424 -141335108 + L2 LINE L2 3244 3307 -6 318 272 155 42 chr5 61752765 61752853 -141332679 + L1M2 LINE L1 633 710 -6139 195 100 0 0 chr5 61752853 61752883 -141332649 + (CCCCCG)n Simple_repeat Simple_repeat 2 31 0 318 272 155 42 chr5 61752883 61753055 -141332477 + L1M2 LINE L1 710 1133 -5716 343 275 127 99 chr5 61753133 61753678 -141331854 - L1M2 LINE L1 -5450 1399 840 25 51 0 0 chr5 61753982 61754021 -141331511 + GC_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 61756094 61756115 -141329417 + AT_rich Low_complexity Low_complexity 1 21 0 368 274 134 22 chr5 61757755 61757934 -141327598 - MIR SINE MIR -56 206 8 621 190 107 25 chr5 61759151 61759272 -141326260 - FLAM_A SINE Alu -2 131 1 274 223 87 78 chr5 61759375 61759478 -141326054 + L2 LINE L2 3210 3313 0 2109 113 3 17 chr5 61759611 61759912 -141325620 - AluSx SINE Alu -13 299 3 477 302 199 58 chr5 61760112 61760939 -141324593 + L2 LINE L2 2034 2977 -337 388 247 0 0 chr5 61761085 61761162 -141324370 + L2 LINE L2 3237 3313 0 207 300 0 0 chr5 61761475 61761535 -141323997 + (TA)n Simple_repeat Simple_repeat 1 60 0 31 0 0 0 chr5 61762517 61762548 -141322984 + AT_rich Low_complexity Low_complexity 1 31 0 2321 103 0 16 chr5 61762592 61762902 -141322630 - AluSq SINE Alu -8 305 1 35 41 0 0 chr5 61763557 61763606 -141321926 + AT_rich Low_complexity Low_complexity 1 49 0 232 281 67 82 chr5 61765128 61765166 -141320366 + MIR SINE MIR 21 58 -150 2321 91 0 3 chr5 61765166 61765463 -141320069 + AluSx SINE Alu 2 297 -15 232 281 67 82 chr5 61765463 61765559 -141319973 + MIR SINE MIR 58 153 -55 327 247 113 0 chr5 61765870 61765967 -141319565 + MIR3 SINE MIR 82 189 -19 1622 180 3 37 chr5 61766744 61767067 -141318465 - AluJb SINE Alu 0 312 1 29 28 0 0 chr5 61768181 61768217 -141317315 + AT_rich Low_complexity Low_complexity 1 36 0 246 221 74 90 chr5 61769646 61769768 -141315764 + MIR SINE MIR 87 206 -56 670 292 65 9 chr5 61770004 61770220 -141315312 - MIR SINE MIR -25 237 10 2141 108 0 0 chr5 61770442 61770746 -141314786 - AluSc SINE Alu 0 304 1 1784 99 16 4 chr5 61772064 61772307 -141313225 + AluSg SINE Alu 54 299 -11 306 289 7 37 chr5 61772859 61772994 -141312538 + GA-rich Low_complexity Low_complexity 3 133 0 310 276 143 9 chr5 61773480 61773585 -141311947 - L2 LINE L2 -3 3310 3192 327 302 112 41 chr5 61775201 61775370 -141310162 - L2 LINE L2 -5 3267 3087 180 0 0 0 chr5 61776411 61776431 -141309101 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2849 170 28 21 chr5 61777058 61777587 -141307945 + MER6A DNA MER2_type 2 534 -71 2036 128 0 0 chr5 61777654 61777966 -141307566 - AluSx SINE Alu 0 312 1 1486 118 0 27 chr5 61778389 61778609 -141306923 - AluSg/x SINE Alu -11 301 88 480 127 0 0 chr5 61778611 61778674 -141306858 + AluS SINE Alu 11 73 -239 435 304 91 18 chr5 61779809 61780029 -141305503 + MIR SINE MIR 6 241 -21 222 265 48 12 chr5 61780138 61780221 -141305311 + MIR SINE MIR 177 262 0 855 227 69 15 chr5 61780274 61780477 -141305055 - MIR SINE MIR -46 216 3 207 0 0 0 chr5 61781050 61781073 -141304459 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 420 248 28 28 chr5 61781513 61781654 -141303878 - MER103 DNA DNA -2 164 24 2497 44 34 0 chr5 61781704 61782001 -141303531 - AluY SINE Alu -4 307 1 194 326 89 67 chr5 61782012 61782147 -141303385 + L2 LINE L2 2935 3072 -200 2061 127 3 0 chr5 61784837 61785128 -141300404 + AluSx SINE Alu 1 292 -20 22 56 0 0 chr5 61786133 61786169 -141299363 + AT_rich Low_complexity Low_complexity 1 36 0 1692 163 3 29 chr5 61786590 61786896 -141298636 + AluJb SINE Alu 3 300 -12 292 316 45 23 chr5 61787365 61787498 -141298034 + MIR SINE MIR 20 155 -107 533 266 161 25 chr5 61788129 61788328 -141297204 + MIR SINE MIR 10 235 -27 2351 92 7 0 chr5 61788455 61788761 -141296771 - AluSp SINE Alu -5 308 1 189 345 55 64 chr5 61789365 61789475 -141296057 - L2 LINE L2 -45 3227 3119 201 152 0 0 chr5 61790403 61790436 -141295096 + (CATA)n Simple_repeat Simple_repeat 3 35 0 677 219 35 6 chr5 61790610 61790779 -141294753 - MER104 DNA MER2_type -2 178 5 337 309 182 30 chr5 61790979 61791449 -141294083 - L2 LINE L2 -2 3270 2721 413 225 28 49 chr5 61791545 61791687 -141293845 + L1ME LINE L1 5535 5673 -448 2190 90 10 3 chr5 61791688 61791976 -141293556 + AluSq SINE Alu 24 313 0 241 202 26 35 chr5 61792619 61792733 -141292799 + CT-rich Low_complexity Low_complexity 2 114 0 433 245 0 20 chr5 61794669 61794767 -141290765 + U13 snRNA snRNA 9 104 0 861 189 6 34 chr5 61795101 61795276 -141290256 - MER3 DNA MER1_type -78 131 9 415 333 80 27 chr5 61795335 61795560 -141289972 - L3 LINE CR1 -203 1374 1138 362 235 101 17 chr5 61795639 61795758 -141289774 + L3 LINE CR1 1335 1463 -114 24 0 0 0 chr5 61796575 61796599 -141288933 + AT_rich Low_complexity Low_complexity 1 24 0 5277 181 59 39 chr5 61797523 61798089 -141287443 + Charlie1a DNA MER1_type 1 554 -2207 2375 101 0 0 chr5 61798089 61798395 -141287137 + AluSq SINE Alu 1 306 -7 5277 181 59 39 chr5 61798395 61798816 -141286716 + Charlie1a DNA MER1_type 554 1018 -1743 2297 76 14 3 chr5 61798816 61799107 -141286425 + AluSx SINE Alu 9 302 -10 5277 181 59 39 chr5 61799107 61799281 -141286251 + Charlie1a DNA MER1_type 1018 1187 -268 465 214 175 19 chr5 61799561 61799740 -141285792 - MLT1G1 LTR MaLR -46 549 283 318 230 11 11 chr5 61799860 61799950 -141285582 - MLT1F LTR MaLR -462 80 20 577 318 17 21 chr5 61800048 61800281 -141285251 - L1MC4a LINE L1 -1983 5825 5594 801 227 6 0 chr5 61800318 61800490 -141285042 - L1MB7 LINE L1 0 6184 6012 605 272 85 37 chr5 61800537 61800663 -141284869 + MER93a LTR ERV1 118 237 -165 180 0 0 0 chr5 61800663 61800683 -141284849 + (CTTTG)n Simple_repeat Simple_repeat 1 20 0 605 272 85 37 chr5 61800683 61800828 -141284704 + MER93a LTR ERV1 237 402 0 2709 175 52 2 chr5 61800835 61801332 -141284200 - L1MB7 LINE L1 -186 5992 5471 2126 104 14 3 chr5 61801892 61802189 -141283343 - AluSg SINE Alu -10 300 1 1692 149 47 7 chr5 61803648 61803924 -141281608 + AluJo SINE Alu 2 288 -24 297 51 0 0 chr5 61803932 61803971 -141281561 + (TATG)n Simple_repeat Simple_repeat 4 42 0 468 191 0 0 chr5 61804564 61804648 -141280884 - AluJ/FLAM SINE Alu -228 84 1 347 276 162 61 chr5 61804999 61805560 -141279972 + L1ME4a LINE L1 5329 5946 -175 607 243 21 0 chr5 61805637 61805777 -141279755 - MER58A DNA MER1_type -52 172 30 318 276 46 54 chr5 61805781 61805894 -141279638 + L1MB3 LINE L1 5597 5709 -412 2471 78 0 0 chr5 61805894 61806200 -141279332 - AluY SINE Alu -5 306 1 318 276 46 54 chr5 61806200 61806325 -141279207 + L1MB3 LINE L1 5709 5833 -288 * 1422 120 99 0 chr5 61806317 61806559 -141278973 + L1MB2 LINE L1 5729 5994 -177 1210 120 0 98 chr5 61806565 61806790 -141278742 + AluJo SINE Alu 83 285 -27 1095 181 18 5 chr5 61806790 61807011 -141278521 + L1MB3 LINE L1 5959 6182 -1 28 0 0 0 chr5 61807039 61807067 -141278465 + AT_rich Low_complexity Low_complexity 1 28 0 283 98 0 0 chr5 61807592 61807633 -141277899 + MADE1 DNA Mariner 13 53 -27 379 22 0 0 chr5 61807647 61807693 -141277839 - MADE1 DNA Mariner -34 46 1 227 304 51 0 chr5 61807803 61807882 -141277650 + MIR SINE MIR 66 148 -114 276 289 71 45 chr5 61808124 61808515 -141277017 - L1ME4a LINE L1 -188 5933 5482 610 259 82 20 chr5 61808749 61809004 -141276528 - L1ME LINE L1 -328 5793 5523 194 0 39 0 chr5 61812132 61812158 -141273374 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1017 59 66 0 chr5 61813074 61813210 -141272322 + MER107 DNA MER1_type 1 145 -52 236 29 0 29 chr5 61813210 61813244 -141272288 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 878 163 17 109 chr5 61813636 61813875 -141271657 - MER20 DNA MER1_type -1 218 2 493 263 171 39 chr5 61814121 61814326 -141271206 + MIR SINE MIR 15 246 -16 494 268 20 13 chr5 61814474 61814627 -141270905 + MER103 DNA DNA 1 154 -12 3242 190 61 50 chr5 61815018 61815775 -141269757 - L1MC4a LINE L1 -121 7921 7092 1372 92 15 0 chr5 61815775 61815971 -141269561 + L1PA7 LINE L1 5952 6150 -4 3242 190 61 50 chr5 61815971 61816209 -141269323 - L1MC4a LINE L1 -950 7092 6858 23 0 0 0 chr5 61816219 61816242 -141269290 + AT_rich Low_complexity Low_complexity 1 23 0 579 162 15 37 chr5 61816301 61816437 -141269095 - L1MC4 LINE L1 -939 7103 6971 207 0 0 0 chr5 61819536 61819559 -141265973 + (CAA)n Simple_repeat Simple_repeat 1 23 0 1681 193 0 7 chr5 61820418 61820703 -141264829 + AluJo SINE Alu 1 283 -29 2089 134 7 0 chr5 61821378 61821676 -141263856 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr5 61823602 61823627 -141261905 + AT_rich Low_complexity Low_complexity 1 25 0 2154 134 0 0 chr5 61823629 61823928 -141261604 + AluSx SINE Alu 1 299 -13 529 308 93 6 chr5 61823980 61824157 -141261375 - MIR3 SINE MIR -15 193 2 1738 161 20 10 chr5 61824265 61824570 -141260962 - AluJo SINE Alu -4 308 1 2181 191 23 8 chr5 61825997 61826390 -141259142 + MER47B DNA MER2_type 20 418 0 371 323 0 0 chr5 61826453 61826552 -141258980 + MER82 DNA MER2_type 2 100 -553 198 103 0 0 chr5 61826557 61826586 -141258946 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 2117 125 24 0 chr5 61826672 61826969 -141258563 - AluSx SINE Alu -8 304 1 550 325 29 42 chr5 61827110 61827350 -141258182 + MIR SINE MIR 2 238 -24 510 287 33 28 chr5 61827960 61828141 -141257391 + L1MC/D LINE L1 5520 5701 -2107 1658 163 10 21 chr5 61828272 61828561 -141256971 + AluJo SINE Alu 1 286 -26 291 85 0 0 chr5 61828635 61828682 -141256850 + (CA)n Simple_repeat Simple_repeat 2 48 0 8037 32 13 0 chr5 61828934 61829926 -141255606 - L1P LINE L1 -882 5264 4260 369 337 12 26 chr5 61829953 61830240 -141255292 + L1MEc LINE L1 1449 1681 -826 23 33 0 0 chr5 61830462 61830492 -141255040 + AT_rich Low_complexity Low_complexity 1 30 0 235 355 91 25 chr5 61830812 61830933 -141254599 - L3 LINE CR1 0 1577 1449 25 0 0 0 chr5 61832861 61832886 -141252646 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr5 61833540 61833580 -141251952 + AT_rich Low_complexity Low_complexity 1 40 0 493 141 4 11 chr5 61833653 61833749 -141251783 - L1MC4 LINE L1 -2 8040 7849 1868 216 136 19 chr5 61833750 61834338 -141251194 - L1MC4 LINE L1 -306 7736 7080 1618 220 134 20 chr5 61834342 61834842 -141250690 - L1MC4 LINE L1 -1028 7014 6458 1955 120 7 0 chr5 61834963 61835238 -141250294 - AluSx SINE Alu 0 312 36 24 32 0 0 chr5 61835385 61835416 -141250116 + AT_rich Low_complexity Low_complexity 1 31 0 426 275 197 0 chr5 61835698 61835895 -141249637 + MIR SINE MIR 17 252 -10 577 229 8 0 chr5 61836012 61836130 -141249402 - Charlie8 DNA MER1_type -2226 191 73 2293 98 3 7 chr5 61836286 61836592 -141248940 - AluSc SINE Alu -4 305 1 561 328 86 34 chr5 61837186 61837719 -141247813 - L2 LINE L2 -554 2760 2200 292 301 35 18 chr5 61837788 61837901 -141247631 - MLT1J LTR MaLR -100 411 297 977 52 15 0 chr5 61838849 61838984 -141246548 + (TCCA)n Simple_repeat Simple_repeat 2 138 0 573 268 7 0 chr5 61839317 61839455 -141246077 + MER91B DNA MER1_type 25 163 -27 2058 170 51 39 chr5 61839662 61839932 -141245600 - Charlie1b DNA MER1_type -2244 517 237 2306 101 0 0 chr5 61839932 61840230 -141245302 - AluSx SINE Alu -14 298 1 2058 170 51 39 chr5 61840230 61840470 -141245062 - Charlie1b DNA MER1_type -2524 237 1 23 33 0 0 chr5 61840557 61840587 -141244945 + AT_rich Low_complexity Low_complexity 1 30 0 437 296 130 49 chr5 61840778 61840804 -141244728 + L2 LINE L2 1609 1631 -1683 180 0 0 0 chr5 61840804 61840824 -141244708 + (CA)n Simple_repeat Simple_repeat 2 21 0 437 296 130 49 chr5 61840824 61841104 -141244428 + L2 LINE L2 1631 1940 -1374 229 241 317 21 chr5 61841109 61841254 -141244278 + L2 LINE L2 2155 2342 -972 1212 280 112 27 chr5 61841257 61841662 -141243870 + L2 LINE L2 2488 2970 -343 2209 171 31 10 chr5 61841662 61842077 -141243455 - MSTB LTR MaLR -2 424 1 1212 280 112 27 chr5 61842077 61842213 -141243319 + L2 LINE L2 2970 3093 -220 443 255 111 20 chr5 61842233 61842386 -141243146 - LTR33 LTR ERVL -11 510 344 464 279 165 13 chr5 61842461 61842619 -141242913 - LTR33 LTR ERVL -339 182 1 287 226 95 0 chr5 61842630 61842714 -141242818 + L2 LINE L2 3104 3195 -118 1502 142 0 29 chr5 61842853 61843093 -141242439 + AluJo SINE Alu 1 233 -79 2651 229 64 36 chr5 61843387 61843933 -141241599 + L1M4 LINE L1 2590 3176 -2970 467 256 111 0 chr5 61843933 61844050 -141241482 + FLAM_C SINE Alu 1 130 -3 2651 229 64 36 chr5 61844050 61844453 -141241079 + L1M4 LINE L1 3176 3566 -2580 323 260 87 67 chr5 61844524 61844778 -141240754 + L1M4 LINE L1 3790 4048 -2098 348 233 0 0 chr5 61845075 61845161 -141240371 + L1 LINE L1 3006 3091 -3055 2361 70 3 29 chr5 61845572 61845886 -141239646 - AluSx SINE Alu -6 306 1 546 275 41 8 chr5 61846114 61846318 -141239214 + L1 LINE L1 3564 3781 -2365 370 167 0 0 chr5 61846387 61846459 -141239073 + L1MA10 LINE L1 6256 6327 -7 382 328 84 74 chr5 61847120 61847723 -141237809 - L1M2 LINE L1 -5471 1378 602 353 251 84 0 chr5 61848337 61848435 -141237097 + MIR SINE MIR 47 150 -67 2054 106 18 3 chr5 61849404 61849687 -141235845 + AluSg SINE Alu 14 300 -10 192 215 13 114 chr5 61850003 61850082 -141235450 + MIR SINE MIR 182 252 -10 * 209 176 0 0 chr5 61850049 61850083 -141235449 + L2 LINE L2 3224 3257 -15 294 194 0 0 chr5 61850223 61850285 -141235247 + (TA)n Simple_repeat Simple_repeat 2 63 0 865 125 0 29 chr5 61850728 61850864 -141234668 - FLAM_C SINE Alu 0 133 2 2355 105 0 0 chr5 61850889 61851195 -141234337 - AluSx SINE Alu -6 306 1 211 307 161 15 chr5 61851936 61852073 -141233459 + MIR SINE MIR 23 179 -83 23 0 0 0 chr5 61852161 61852184 -141233348 + AT_rich Low_complexity Low_complexity 1 23 0 1848 175 7 0 chr5 61853193 61853501 -141232031 + AluJb SINE Alu 1 310 -2 2368 89 0 0 chr5 61853623 61853915 -141231617 + AluSg SINE Alu 1 292 -18 900 238 149 37 chr5 61855413 61855953 -141229579 + L2 LINE L2 2525 3141 -172 2162 104 0 0 chr5 61856635 61856915 -141228617 - AluSg SINE Alu -9 301 22 469 287 8 16 chr5 61862473 61862595 -141222937 + L2 LINE L2 3193 3313 0 4732 185 38 23 chr5 61862742 61864946 -141220586 + L1MC2 LINE L1 4111 6343 -1 4108 165 53 9 chr5 61865075 61865889 -141219643 - L1MC1 LINE L1 -1 6332 5483 261 118 0 0 chr5 61866484 61866535 -141218997 + (CA)n Simple_repeat Simple_repeat 1 51 0 180 0 0 0 chr5 61866534 61866554 -141218978 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 21 0 0 0 chr5 61866696 61866717 -141218815 + AT_rich Low_complexity Low_complexity 1 21 0 1953 154 10 0 chr5 61866812 61867111 -141218421 + AluJb SINE Alu 1 302 -10 332 309 158 36 chr5 61868868 61868956 -141216576 + L1M4 LINE L1 3796 3872 -2274 467 120 65 0 chr5 61868956 61869048 -141216484 + L1MA5A LINE L1 6198 6295 -2 332 309 158 36 chr5 61869048 61869321 -141216211 + L1M4 LINE L1 3872 4201 -1945 1169 134 0 1 chr5 61869536 61869784 -141215748 + AluSg SINE Alu 1 279 -31 186 43 0 0 chr5 61869789 61869812 -141215720 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1906 106 46 14 chr5 61873467 61873750 -141211782 + AluSx SINE Alu 1 292 -20 1562 176 0 32 chr5 61874033 61874312 -141211220 - AluJo SINE Alu -11 301 32 1964 151 0 7 chr5 61874583 61874900 -141210632 - AluSx SINE Alu 0 312 1 38 39 0 0 chr5 61875367 61875419 -141210113 + AT_rich Low_complexity Low_complexity 1 52 0 301 114 0 0 chr5 61875707 61875751 -141209781 + L2 LINE L2 3264 3307 -6 285 269 0 0 chr5 61877071 61877138 -141208394 - MIR SINE MIR -79 183 117 850 184 7 0 chr5 61877377 61877529 -141208003 + Tigger3(Golem) DNA MER2_type 2885 3037 0 1132 68 0 0 chr5 61877571 61877704 -141207828 + AluSq/x SINE Alu 1 133 -179 1157 291 146 34 chr5 61879023 61879769 -141205763 - L2 LINE L2 -341 2973 2144 181 364 0 0 chr5 61879947 61880013 -141205519 - L2 LINE L2 -819 2495 2430 1247 175 45 42 chr5 61880387 61880673 -141204859 + AluJo SINE Alu 1 287 -25 2430 52 0 32 chr5 61881713 61882021 -141203511 + AluY SINE Alu 1 298 -13 1780 172 0 17 chr5 61882223 61882520 -141203012 - AluJo SINE Alu -20 292 1 2133 123 3 0 chr5 61882705 61882997 -141202535 + AluSx SINE Alu 1 293 -19 270 255 59 39 chr5 61884179 61884281 -141201251 + MIR SINE MIR 103 206 -56 2136 115 3 16 chr5 61885906 61886220 -141199312 + AluSx SINE Alu 1 310 -2 497 283 23 46 chr5 61886428 61886601 -141198931 + MIR3 SINE MIR 25 193 -15 1629 128 68 8 chr5 61886622 61886887 -141198645 + AluSx SINE Alu 26 306 -6 238 211 96 0 chr5 61887287 61887339 -141198193 + MIR3 SINE MIR 123 179 -29 498 291 124 90 chr5 61888727 61890036 -141195496 + L1M2 LINE L1 403 1379 -5470 22 0 0 0 chr5 61890432 61890454 -141195078 + AT_rich Low_complexity Low_complexity 1 22 0 198 313 60 0 chr5 61892192 61892259 -141193273 - L2 LINE L2 -51 3221 3151 23 33 0 0 chr5 61892433 61892463 -141193069 + AT_rich Low_complexity Low_complexity 1 30 0 695 286 58 55 chr5 61892814 61893143 -141192389 - MER102b DNA MER1_type -5 336 7 4794 210 80 18 chr5 61893594 61895131 -141190401 - Charlie2a DNA MER1_type -32 2830 1199 549 200 0 9 chr5 61895131 61895236 -141190296 + MLT1A2 LTR MaLR 1 104 -270 236 189 38 0 chr5 61895527 61895580 -141189952 + MLT1A2 LTR MaLR 127 181 -209 183 80 0 0 chr5 61895605 61895630 -141189902 + (TC)n Simple_repeat Simple_repeat 2 26 0 928 169 10 26 chr5 61895634 61895840 -141189692 + MLT1A2 LTR MaLR 187 374 0 536 165 103 49 chr5 61895877 61896101 -141189431 - Charlie2a DNA MER1_type -1679 1183 948 936 223 110 31 chr5 61896168 61896460 -141189072 - Charlie2a DNA MER1_type -2162 700 386 27 62 0 0 chr5 61897219 61897267 -141188265 + AT_rich Low_complexity Low_complexity 1 48 0 394 285 106 8 chr5 61897419 61897542 -141187990 - MIR SINE MIR -108 154 20 236 211 53 18 chr5 61897820 61897877 -141187655 + L2 LINE L2 3214 3272 0 2046 155 10 52 chr5 61898695 61899102 -141186430 - MLT1B LTR MaLR 0 390 1 1191 231 128 12 chr5 61899856 61900271 -141185261 - LTR33A LTR ERVL 0 523 61 455 286 193 12 chr5 61900496 61900667 -141184865 + MIR SINE MIR 47 248 -14 1833 135 79 22 chr5 61900716 61901071 -141184461 + THE1C LTR MaLR 1 375 0 922 280 72 17 chr5 61901089 61901435 -141184097 - LTR16C LTR ERVL -38 453 89 376 252 0 58 chr5 61901611 61901766 -141183766 + MER112 DNA MER1_type 8 153 -107 1359 134 14 5 chr5 61902563 61902772 -141182760 + MER20 DNA MER1_type 9 219 0 355 309 79 0 chr5 61902772 61902937 -141182595 + Charlie2 DNA MER1_type 30 207 -2655 2258 89 3 26 chr5 61902978 61903291 -141182241 + AluSc SINE Alu 1 306 -3 907 204 0 18 chr5 61903303 61903470 -141182062 + FRAM SINE Alu 1 163 -13 326 165 0 139 chr5 61903526 61903600 -141181932 + Charlie2 DNA MER1_type 2710 2764 -98 2095 139 0 0 chr5 61903600 61903894 -141181638 - AluSx SINE Alu -18 294 1 326 165 0 139 chr5 61903894 61903934 -141181598 + Charlie2 DNA MER1_type 2764 2808 -54 837 224 26 42 chr5 61903934 61904126 -141181406 + L1ME3 LINE L1 5968 6156 -6 276 182 0 18 chr5 61904142 61904197 -141181335 + Charlie2 DNA MER1_type 2809 2862 0 802 195 0 27 chr5 61904374 61904523 -141181009 + MLT1A1 LTR MaLR 11 155 -210 840 157 0 15 chr5 61904525 61904659 -141180873 + FLAM_C SINE Alu 2 133 -10 1280 149 10 10 chr5 61904659 61904867 -141180665 + MLT1A1 LTR MaLR 148 355 -10 190 307 226 18 chr5 61904890 61905173 -141180359 + L2 LINE L2 302 643 -2671 253 261 19 62 chr5 61905220 61905353 -141180179 - L1M4 LINE L1 -970 5176 5050 3537 151 12 42 chr5 61905353 61905924 -141179608 + MLT2B3 LTR ERVL 1 554 0 253 261 19 62 chr5 61905924 61905951 -141179581 - L1M4 LINE L1 -1096 5050 5023 846 163 0 7 chr5 61905951 61906086 -141179446 + AluJo SINE Alu 1 134 -178 1522 208 42 78 chr5 61906114 61906590 -141178942 - L1M4 LINE L1 -1114 5032 4574 899 242 48 26 chr5 61906594 61906639 -141178893 - L1M4 LINE L1 -2063 4083 4040 3239 214 3 9 chr5 61906639 61907209 -141178323 + MLT1F1 LTR MaLR 1 567 0 899 242 48 26 chr5 61907209 61907436 -141178096 - L1M4 LINE L1 -2106 4040 3805 719 233 217 38 chr5 61907445 61907763 -141177769 + L1ME2 LINE L1 5777 6151 -13 2318 120 0 0 chr5 61907785 61908093 -141177439 + AluSx SINE Alu 1 308 -4 1938 159 0 19 chr5 61908105 61908420 -141177112 + AluSx SINE Alu 1 309 -3 1714 207 37 4 chr5 61909305 61909347 -141176185 - MLT2B1 LTR ERVL -2 513 474 424 0 36 0 chr5 61909347 61909403 -141176129 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 1714 207 37 4 chr5 61909403 61909811 -141175721 - MLT2B1 LTR ERVL -41 474 1 3790 166 48 18 chr5 61910078 61910386 -141175146 + L1MB8 LINE L1 5471 5768 -410 1436 185 41 38 chr5 61910386 61910678 -141174854 + AluJb SINE Alu 5 297 -15 3790 166 48 18 chr5 61910678 61911056 -141174476 + L1MB8 LINE L1 5768 6178 0 490 280 106 48 chr5 61911621 61911816 -141173716 - L1ME3A LINE L1 -255 5915 5733 1111 230 103 44 chr5 61911816 61912251 -141173281 + LTR16B LTR ERVL 1 461 -3 490 280 106 48 chr5 61912251 61912680 -141172852 - L1ME3A LINE L1 -437 5733 5254 657 169 81 48 chr5 61914117 61914241 -141171291 - FLAM_A SINE Alu -3 130 3 978 161 0 0 chr5 61914281 61914424 -141171108 + FRAM SINE Alu 10 152 -24 203 283 0 0 chr5 61914877 61914923 -141170609 + L2 LINE L2 3211 3256 -16 * 240 204 0 0 chr5 61914889 61914933 -141170599 + MIR SINE MIR 219 262 0 775 125 179 30 chr5 61914981 61915149 -141170383 + MER20 DNA MER1_type 27 219 0 191 312 32 65 chr5 61915787 61915880 -141169652 + MIR SINE MIR 64 153 -109 244 330 116 17 chr5 61916081 61916254 -141169278 - MIR SINE MIR -71 191 2 2162 106 25 0 chr5 61916901 61917185 -141168347 + AluSx SINE Alu 1 291 -21 3428 120 89 104 chr5 61917219 61918005 -141167527 - LTR1 LTR ERV1 -11 774 1 2208 169 77 20 chr5 61918794 61919197 -141166335 + MSTA LTR MaLR 3 428 0 236 209 47 12 chr5 61919306 61919392 -141166140 + (TGAA)n Simple_repeat Simple_repeat 3 91 0 2141 112 73 25 chr5 61919946 61920304 -141165228 + THE1C LTR MaLR 1 375 0 2437 94 0 0 chr5 61922476 61922784 -141162748 + AluSc SINE Alu 1 308 -1 415 260 78 13 chr5 61922798 61922952 -141162580 + L1ME LINE L1 5625 5788 -333 1593 167 56 21 chr5 61923007 61923295 -141162237 + AluJo SINE Alu 1 298 -14 27 49 0 0 chr5 61923477 61923518 -141162014 + AT_rich Low_complexity Low_complexity 1 41 0 1064 277 105 27 chr5 61923589 61923990 -141161542 - MLT1J2 LTR MaLR -6 444 13 207 0 0 0 chr5 61924518 61924541 -141160991 + (A)n Simple_repeat Simple_repeat 1 23 0 469 289 51 41 chr5 61924605 61924802 -141160730 - MIR SINE MIR -5 257 59 416 297 35 28 chr5 61924963 61925108 -141160424 + MER5A DNA MER1_type 41 186 -3 425 260 60 0 chr5 61925357 61925457 -141160075 - MER81 DNA DNA 0 114 9 505 270 0 9 chr5 61925457 61925572 -141159960 - MER81 DNA DNA 0 114 1 195 213 160 0 chr5 61927120 61927195 -141158337 - L3b LINE CR1 -191 1392 1306 611 341 152 45 chr5 61927602 61929300 -141156232 + L2 LINE L2 117 2042 -1272 2208 99 0 30 chr5 61929300 61929603 -141155929 - AluSx SINE Alu -18 294 1 611 341 152 45 chr5 61929603 61929806 -141155726 + L2 LINE L2 2042 2222 -1092 1024 279 54 7 chr5 61929806 61930192 -141155340 - LTR16B LTR ERVL 0 464 1 256 326 31 47 chr5 61930204 61930333 -141155199 - MER5B DNA MER1_type -7 171 45 781 313 213 25 chr5 61930386 61931228 -141154304 + L2 LINE L2 2215 3216 -56 492 242 148 11 chr5 61931355 61931537 -141153995 + MIR SINE MIR 50 256 -6 185 270 0 0 chr5 61932136 61932173 -141153359 - MIR SINE MIR -8 254 218 * 215 171 0 0 chr5 61932141 61932176 -141153356 - L2 LINE L2 -19 3253 3219 606 328 48 12 chr5 61932212 61932462 -141153070 + MIR SINE MIR 2 260 -2 318 309 121 13 chr5 61932469 61932618 -141152914 - L2 LINE L2 -182 3090 2926 285 140 0 0 chr5 61932673 61932730 -141152802 + (TG)n Simple_repeat Simple_repeat 2 58 0 589 274 61 15 chr5 61932766 61932963 -141152569 + LTR33 LTR ERVL 15 220 -301 2312 89 0 35 chr5 61934040 61934354 -141151178 + AluSg SINE Alu 1 303 -7 2280 89 3 0 chr5 61934365 61934657 -141150875 + AluSx SINE Alu 1 293 -19 629 218 8 10 chr5 61935617 61935764 -141149768 - L1ME LINE L1 -378 5786 5643 310 263 62 21 chr5 61935747 61935941 -141149591 - L1ME LINE L1 -964 5182 4981 * 544 163 118 7 chr5 61936299 61936434 -141149098 + MLT1G LTR MaLR 441 590 0 2044 117 163 21 chr5 61936738 61937113 -141148419 - MSTA LTR MaLR 0 428 1 831 269 67 75 chr5 61937442 61937803 -141147729 - MLT1K LTR MaLR -171 417 60 1739 155 7 22 chr5 61937808 61938085 -141147447 - AluJo SINE Alu -28 284 12 420 315 56 35 chr5 61938167 61938178 -141147354 + L2 LINE L2 3077 3086 -227 975 217 171 30 chr5 61938178 61938441 -141147091 - AluSg SINE Alu 0 300 1 420 315 56 35 chr5 61938441 61938661 -141146871 + L2 LINE L2 3086 3313 0 236 284 142 0 chr5 61938744 61938871 -141146661 + MIR SINE MIR 63 207 -55 5978 108 58 3 chr5 61938979 61940022 -141145510 - L1PBa LINE L1 -4228 2635 1535 2042 93 8 0 chr5 61940122 61940390 -141145142 - AluSg SINE Alu -31 279 10 1226 171 80 28 chr5 61940408 61940704 -141144828 - LTR54 LTR ERV1 -135 375 1 345 181 60 48 chr5 61941020 61941103 -141144429 + L1M1 LINE L1 15 98 -7467 827 172 4 147 chr5 61941154 61941427 -141144105 + L1M1 LINE L1 1345 1578 -5987 2392 110 0 0 chr5 61941718 61942028 -141143504 - AluSx SINE Alu 0 312 3 251 314 47 12 chr5 61942029 61942115 -141143417 + MER5A DNA MER1_type 1 89 -100 315 71 0 0 chr5 61942117 61942159 -141143373 + (CA)n Simple_repeat Simple_repeat 2 43 0 5463 200 34 48 chr5 61942176 61942357 -141143175 + L1MD1 LINE L1 3740 3922 -2320 864 177 0 0 chr5 61942357 61942481 -141143051 - FLAM_C SINE Alu -9 124 1 5463 200 34 48 chr5 61942481 61943643 -141141889 + L1MD1 LINE L1 3922 5099 -1143 1670 151 37 4 chr5 61943643 61943914 -141141618 - AluSx SINE Alu -19 293 14 5463 200 34 48 chr5 61943914 61944890 -141140642 + L1MD1 LINE L1 5099 6017 -225 2243 153 249 29 chr5 61944890 61945400 -141140132 - LTR29 LTR ERV1 0 622 1 5463 200 34 48 chr5 61945400 61945615 -141139917 + L1MD1 LINE L1 6017 6234 -8 416 110 82 14 chr5 61945808 61945881 -141139651 - MADE1 DNA Mariner -2 78 1 207 308 15 15 chr5 61945999 61946064 -141139468 - MER5A DNA MER1_type -90 99 35 745 104 0 119 chr5 61946477 61946611 -141138921 + FLAM_C SINE Alu 1 118 -15 1632 129 94 24 chr5 61947041 61947161 -141138371 + AluJb SINE Alu 1 111 -201 189 0 0 0 chr5 61947161 61947182 -141138350 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1632 129 94 24 chr5 61947182 61947348 -141138184 + AluJb SINE Alu 111 307 -5 2229 75 13 33 chr5 61947680 61947933 -141137599 + L1PB1 LINE L1 5850 6098 -53 2311 109 3 0 chr5 61947933 61948237 -141137295 + AluSx SINE Alu 1 305 -7 2229 75 13 33 chr5 61948237 61948289 -141137243 + L1PB1 LINE L1 6098 6149 -2 190 374 0 30 chr5 61948583 61948682 -141136850 + MER5A DNA MER1_type 94 189 0 202 373 27 59 chr5 61948728 61948948 -141136584 + L2 LINE L2 2717 2929 -385 2186 123 0 0 chr5 61949557 61949850 -141135682 - AluSp SINE Alu -20 293 1 2338 89 7 10 chr5 61949979 61950283 -141135249 - AluSq SINE Alu -10 303 1 1947 163 3 6 chr5 61950417 61950730 -141134802 + AluSx SINE Alu 1 312 0 278 325 198 0 chr5 61950992 61951118 -141134414 - L2 LINE L2 -1 3271 3121 21 36 0 0 chr5 61951787 61951815 -141133717 + AT_rich Low_complexity Low_complexity 1 28 0 237 277 75 21 chr5 61952069 61952163 -141133369 + L1MEd LINE L1 72 170 -5949 2316 80 0 7 chr5 61952275 61952605 -141132927 + AluSc SINE Alu 1 309 0 1984 159 0 0 chr5 61952741 61953042 -141132490 + AluJb SINE Alu 1 301 -11 1893 182 46 26 chr5 61953179 61953569 -141131963 - MER68 LTR ERV1 -2 560 163 1510 160 33 7 chr5 61953589 61953864 -141131668 - L1MB8 LINE L1 0 6178 5897 1055 190 0 66 chr5 61953888 61953940 -141131592 + AluJo SINE Alu 87 141 -171 1862 171 0 7 chr5 61953940 61954233 -141131299 + AluSx SINE Alu 3 293 -19 1055 190 0 66 chr5 61954233 61954422 -141131110 + AluJo SINE Alu 141 312 0 1122 107 42 12 chr5 61954423 61954591 -141130941 - MER68 LTR ERV1 -389 173 1 1404 195 130 32 chr5 61954667 61955006 -141130526 + L1MC3 LINE L1 7101 7472 -313 827 173 23 8 chr5 61955008 61955141 -141130391 + AluJo SINE Alu 2 136 -176 1940 146 9 0 chr5 61955141 61955456 -141130076 + L1MC3 LINE L1 7460 7777 -8 194 71 0 71 chr5 61955463 61955505 -141130027 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 333 279 33 25 chr5 61956427 61956549 -141128983 + LTR67 LTR ERVL 435 557 0 189 203 101 63 chr5 61956712 61956792 -141128740 - L2 LINE L2 -253 3060 2696 409 231 42 7 chr5 61957218 61957361 -141128171 + L1MD2 LINE L1 2159 2306 -4090 * 832 143 48 85 chr5 61957351 61957383 -141128149 + L1MC2 LINE L1 6157 6189 -155 1283 195 99 71 chr5 61957383 61957576 -141127956 + MLT1A2 LTR MaLR 1 187 -187 234 0 0 0 chr5 61957576 61957602 -141127930 + (CA)n Simple_repeat Simple_repeat 2 27 0 1283 195 99 71 chr5 61957602 61957772 -141127760 + MLT1A2 LTR MaLR 187 374 0 832 143 48 85 chr5 61957772 61957928 -141127604 + L1MC2 LINE L1 6189 6338 -6 3062 240 9 12 chr5 61957928 61958732 -141126800 + L1MD2 LINE L1 2247 3047 -3168 1121 173 65 40 chr5 61958735 61958945 -141126587 + MLT1D LTR MaLR 1 219 -286 5547 109 30 14 chr5 61958945 61959713 -141125819 - LTR17 LTR ERV1 0 780 1 1121 173 65 40 chr5 61959713 61959750 -141125782 + MLT1D LTR MaLR 219 254 -251 563 159 88 9 chr5 61959761 61959874 -141125658 + MLT1D LTR MaLR 384 505 0 2286 231 45 12 chr5 61959924 61960530 -141125002 + L1MD2 LINE L1 3134 3759 -2456 1365 189 83 97 chr5 61960531 61960987 -141124545 - LTR7 LTR ERV1 0 450 1 3259 96 85 38 chr5 61960987 61961519 -141124013 - HERVH LTR ERV1 0 7713 7157 * 6582 131 1 16 chr5 61961512 61962533 -141122999 - HERVH LTR ERV1 -1697 6016 5011 4259 142 5 6 chr5 61962531 61963562 -141121970 - HERVH LTR ERV1 -2749 4258 3357 * 12564 137 13 25 chr5 61963562 61965618 -141119914 - HERVH LTR ERV1 -4883 2830 800 1782 198 28 51 chr5 61965676 61966146 -141119386 - HERVH LTR ERV1 -7254 459 1 1305 204 189 26 chr5 61966146 61966533 -141118999 - LTR7 LTR ERV1 0 450 1 512 230 4 115 chr5 61966533 61966678 -141118854 + L1MD2 LINE L1 3761 3866 -2349 2145 124 0 10 chr5 61966678 61966977 -141118555 + AluSx SINE Alu 10 305 -7 512 230 4 115 chr5 61966977 61967092 -141118440 + L1MD2 LINE L1 3866 3992 -2223 5099 201 60 49 chr5 61967112 61967491 -141118041 + L1MB3 LINE L1 3813 4186 -1960 231 36 0 0 chr5 61967491 61967519 -141118013 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 5099 201 60 49 chr5 61967519 61968634 -141116898 + L1MB3 LINE L1 4186 5323 -823 1496 131 62 44 chr5 61968635 61968909 -141116623 + L1MB3 LINE L1 5655 5933 -238 27 0 0 0 chr5 61968910 61968937 -141116595 + AT_rich Low_complexity Low_complexity 1 27 0 958 153 0 0 chr5 61968961 61969105 -141116427 - FRAM SINE Alu -31 145 2 2009 168 50 19 chr5 61969105 61969468 -141116064 - THE1C LTR MaLR 0 375 2 1058 188 11 69 chr5 61969475 61969751 -141115781 + L1MB3 LINE L1 5922 6181 -2 * 2233 227 42 103 chr5 61969747 61970659 -141114873 + L1MD2 LINE L1 5352 6207 -221 709 200 7 20 chr5 61970555 61970705 -141114827 + L1MA10 LINE L1 6243 6390 -13 * 481 267 79 30 chr5 61970913 61971078 -141114454 - MIR3 SINE MIR -11 197 25 2180 116 33 39 chr5 61971346 61971709 -141113823 + MER46B DNA MER2_type 1 236 0 198 240 20 20 chr5 61972675 61972725 -141112807 - MER5A DNA MER1_type -23 166 117 23 0 0 0 chr5 61973162 61973185 -141112347 + AT_rich Low_complexity Low_complexity 1 23 0 2161 123 7 0 chr5 61973724 61974057 -141111475 + AluSx SINE Alu 1 335 0 519 275 45 15 chr5 61974070 61974270 -141111262 + L1MC4 LINE L1 7837 8042 0 187 143 14 64 chr5 61975146 61975286 -141110246 + (TTTCG)n Simple_repeat Simple_repeat 2 134 0 2012 137 6 13 chr5 61975282 61975680 -141109852 - AluSx SINE Alu 0 396 1 205 233 75 128 chr5 61976633 61976766 -141108766 + MIR SINE MIR 92 217 -45 1691 110 44 0 chr5 61977080 61977307 -141108225 + AluSx SINE Alu 1 237 -75 664 184 0 0 chr5 61977824 61977922 -141107610 + FLAM_A SINE Alu 1 98 -44 295 250 61 90 chr5 61977928 61978272 -141107260 + L1ME4a LINE L1 5582 5915 -206 1733 198 10 0 chr5 61978330 61978638 -141106894 + AluJb SINE Alu 1 311 -1 321 118 0 0 chr5 61978639 61978690 -141106842 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 998 221 65 34 chr5 61978707 61979187 -141106345 - MLT1H LTR MaLR -7 542 1 340 237 51 0 chr5 61979195 61979313 -141106219 + L1ME4a LINE L1 5984 6107 -14 1952 148 3 3 chr5 61979381 61979678 -141105854 - AluSx SINE Alu -15 297 1 310 229 193 8 chr5 61979679 61979923 -141105609 + L1ME4a LINE L1 5831 6119 -2 800 239 71 0 chr5 61980354 61980509 -141105023 - MER96 DNA MER1_type? -9 166 1 235 374 35 47 chr5 61980589 61980929 -141104603 - LTR16C LTR ERVL 0 491 156 2196 238 62 32 chr5 61980941 61981533 -141103999 + Zaphod DNA AcHobo 1 610 -3421 702 251 329 3 chr5 61981530 61981873 -141103659 + LTR50 LTR ERVL 18 472 -323 * 307 259 231 0 chr5 61981900 61982043 -141103489 + LTR50 LTR ERVL 619 794 -1 746 212 45 52 chr5 61982043 61982331 -141103201 + Zaphod DNA AcHobo 614 899 -3132 2265 119 9 19 chr5 61982350 61982711 -141102821 - MLT2C1 LTR ERVL -48 349 1 29 70 0 0 chr5 61982712 61982769 -141102763 + AT_rich Low_complexity Low_complexity 1 57 0 289 197 0 49 chr5 61982914 61982975 -141102557 - Zaphod DNA AcHobo 0 4031 3974 * 1235 166 17 60 chr5 61982964 61983265 -141102267 - Zaphod DNA AcHobo -2671 1360 1073 238 200 62 31 chr5 61983270 61983335 -141102197 - L3 LINE CR1 -427 1150 1084 361 329 132 0 chr5 61983540 61983753 -141101779 + L1ME4a LINE L1 5582 5822 -299 281 257 162 9 chr5 61983902 61984007 -141101525 + L1ME4a LINE L1 5967 6087 -34 2070 111 42 3 chr5 61984080 61984368 -141101164 - AluSq SINE Alu -14 299 1 185 307 128 58 chr5 61984428 61984702 -141100830 + L2 LINE L2 1362 1654 -1660 733 124 138 0 chr5 61984703 61984848 -141100684 - L1M LINE L1 -766 5418 5254 740 232 119 91 chr5 61984870 61985155 -141100377 - LTR16A LTR ERVL -164 286 1 1657 231 116 74 chr5 61985182 61985408 -141100124 - MER21B LTR ERV1 -124 739 524 2384 44 47 7 chr5 61985408 61985706 -141099826 + AluY SINE Alu 1 310 -1 1657 231 116 74 chr5 61985706 61986171 -141099361 - MER21B LTR ERV1 -339 524 19 376 194 48 29 chr5 61986183 61986286 -141099246 - MER103 DNA DNA -60 106 2 537 207 140 67 chr5 61986417 61986503 -141099029 - MER45A DNA AcHobo -1403 178 100 839 159 0 36 chr5 61986503 61986641 -141098891 + FLAM_C SINE Alu 1 133 0 537 207 140 67 chr5 61986641 61986718 -141098814 - MER45A DNA AcHobo -1481 100 3 282 322 129 16 chr5 61986729 61987046 -141098486 + L2 LINE L2 2383 2735 -579 326 208 0 14 chr5 61987426 61987498 -141098034 + MIR SINE MIR 96 166 -96 204 40 0 0 chr5 61988052 61988077 -141097455 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1899 148 0 10 chr5 61988084 61988374 -141097158 - AluSx SINE Alu -25 287 1 2120 124 0 10 chr5 61988403 61988701 -141096831 + AluSq SINE Alu 1 295 -18 656 197 0 15 chr5 61989368 61989500 -141096032 - L1ME LINE L1 -378 5786 5657 2026 229 128 81 chr5 61989500 61989934 -141095598 - L1ME LINE L1 -964 5182 4770 566 208 139 0 chr5 61989934 61990035 -141095497 - FLAM_A SINE Alu -17 116 2 2026 229 128 81 chr5 61990035 61990184 -141095348 - L1ME LINE L1 -1376 4770 4629 2125 141 3 0 chr5 61990184 61990489 -141095043 + AluSq SINE Alu 1 306 -7 2026 229 128 81 chr5 61990489 61991014 -141094518 - L1ME LINE L1 -1517 4629 4021 1089 214 145 68 chr5 61991119 61991534 -141093998 + MER39 LTR ERV1 261 707 0 28 71 0 0 chr5 61991701 61991757 -141093775 + AT_rich Low_complexity Low_complexity 1 56 0 296 284 9 17 chr5 61991959 61992075 -141093457 - L1M4 LINE L1 -1907 4239 4125 1899 138 3 7 chr5 61992206 61992515 -141093017 + AluSx SINE Alu 1 308 0 858 343 99 33 chr5 61993609 61993681 -141091851 - L3 LINE CR1 -514 1063 997 1912 155 0 3 chr5 61993681 61993977 -141091555 + AluSx SINE Alu 2 296 -16 858 343 99 33 chr5 61993977 61994603 -141090929 - L3 LINE CR1 -580 997 319 2340 103 0 0 chr5 61994703 61995005 -141090527 - AluSg SINE Alu -8 302 1 245 217 0 58 chr5 61995535 61995604 -141089928 + AluS SINE Alu 2 59 -244 1531 171 11 15 chr5 61995625 61995894 -141089638 + AluJo SINE Alu 41 308 -4 28 48 0 0 chr5 61996003 61996045 -141089487 + AT_rich Low_complexity Low_complexity 1 42 0 2405 98 0 0 chr5 61997211 61997517 -141088015 + AluSx SINE Alu 1 306 -6 551 245 114 16 chr5 61997944 61998128 -141087404 + MER63A DNA MER1_type 1 202 -8 511 291 100 14 chr5 61998248 61998468 -141087064 - MIR SINE MIR -17 245 7 324 0 0 0 chr5 61998645 61998681 -141086851 + (TG)n Simple_repeat Simple_repeat 2 37 0 2493 84 0 0 chr5 62000235 62000543 -141084989 - AluSg SINE Alu -2 308 1 662 98 22 11 chr5 62000904 62000996 -141084536 + Charlie3 DNA MER1_type 2614 2706 -4 269 221 71 88 chr5 62001114 62001177 -141084355 - MER81 DNA DNA 0 114 52 2236 112 0 3 chr5 62001177 62001481 -141084051 + AluSp SINE Alu 1 303 -10 269 221 71 88 chr5 62001481 62001530 -141084002 - MER81 DNA DNA -62 52 4 2451 170 40 44 chr5 62001561 62002062 -141083470 + MLT1D LTR MaLR 3 501 -4 240 118 0 0 chr5 62002465 62002499 -141083033 - MADE1 DNA Mariner -45 35 2 29 0 0 25 chr5 62002676 62002690 -141082842 + AT_rich Low_complexity Low_complexity 1 14 -25 1599 178 24 17 chr5 62002690 62002844 -141082688 - AluJb SINE Alu -23 289 138 423 0 0 0 chr5 62002844 62002891 -141082641 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2229 78 0 7 chr5 62002891 62003175 -141082357 - AluY SINE Alu -29 282 1 1599 178 24 17 chr5 62003175 62003306 -141082226 - AluJb SINE Alu -173 139 1 29 0 0 25 chr5 62003306 62003331 -141082201 + AT_rich Low_complexity Low_complexity 14 39 0 374 314 109 24 chr5 62003354 62003850 -141081682 - L1M4 LINE L1 -1541 4605 4068 1935 152 20 0 chr5 62004031 62004327 -141081205 + AluSx SINE Alu 1 302 -10 263 242 0 0 chr5 62004356 62004418 -141081114 - L1MC5 LINE L1 -733 7228 7167 1810 169 3 10 chr5 62004425 62004727 -141080805 - AluJo SINE Alu -12 300 1 2050 128 0 14 chr5 62004757 62005054 -141080478 + AluSx SINE Alu 1 293 -19 422 347 48 29 chr5 62005130 62005148 -141080384 + L2 LINE L2 2777 2793 -479 1556 221 88 34 chr5 62005148 62005417 -141080115 - MLT1C LTR MaLR 0 467 163 2289 112 3 0 chr5 62005417 62005722 -141079810 - AluSx SINE Alu -6 306 1 1556 221 88 34 chr5 62005722 62005895 -141079637 - MLT1C LTR MaLR -304 163 1 422 347 48 29 chr5 62005895 62006199 -141079333 + L2 LINE L2 2793 3117 -155 526 265 149 6 chr5 62007209 62007390 -141078142 + L1ME3A LINE L1 5756 5962 -208 1904 146 28 0 chr5 62007426 62007714 -141077818 + AluSx SINE Alu 3 298 -14 211 308 0 15 chr5 62008101 62008166 -141077366 + L2 LINE L2 3205 3268 -4 470 133 33 0 chr5 62008408 62008498 -141077034 - L1MA9 LINE L1 -32 6280 6188 2012 135 92 3 chr5 62008498 62008825 -141076707 + MSTA LTR MaLR 73 428 0 4284 155 38 76 chr5 62008877 62009214 -141076318 - L1MA9 LINE L1 -140 6172 5824 2164 123 0 0 chr5 62009214 62009515 -141076017 + AluSx SINE Alu 1 301 -11 4284 155 38 76 chr5 62009515 62009874 -141075658 - L1MA9 LINE L1 -488 5824 5453 1090 107 6 6 chr5 62009874 62010052 -141075480 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1463 170 37 19 chr5 62010053 62010323 -141075209 - AluJb SINE Alu -37 275 1 4284 155 38 76 chr5 62010323 62010360 -141075172 - L1MA9 LINE L1 -859 5453 5416 2277 102 0 34 chr5 62010360 62010682 -141074850 - AluSp SINE Alu -2 311 1 4284 155 38 76 chr5 62010682 62011062 -141074470 - L1MA9 LINE L1 -896 5416 5099 3328 171 90 46 chr5 62011063 62011719 -141073813 + MER44D DNA MER2_type 2 564 -1923 3396 164 6 6 chr5 62011719 62012220 -141073312 + MER61D LTR ERV1 1 501 0 3328 171 90 46 chr5 62012220 62012263 -141073269 + MER44D DNA MER2_type 564 604 -1 386 266 0 0 chr5 62012263 62012357 -141073175 - L1MA9 LINE L1 -1045 5101 5008 21 0 0 0 chr5 62012578 62012599 -141072933 + AT_rich Low_complexity Low_complexity 1 21 0 2335 76 3 0 chr5 62012729 62013019 -141072513 + AluY SINE Alu 1 291 -20 3125 113 58 58 chr5 62013375 62013922 -141071610 - LTR10A LTR ERV1 -62 547 1 250 255 59 0 chr5 62014186 62014237 -141071295 - MIR SINE MIR -191 71 18 929 161 0 0 chr5 62014733 62014863 -141070669 - FLAM_C SINE Alu -3 130 1 948 224 16 129 chr5 62014891 62015279 -141070253 - MER34 LTR ERV1 -198 344 1 357 229 0 0 chr5 62015304 62015374 -141070158 + MIR SINE MIR 159 228 -34 2285 97 0 0 chr5 62015739 62016028 -141069504 - AluSg SINE Alu -21 289 1 737 205 8 8 chr5 62016483 62016610 -141068922 - FLAM_A SINE Alu -5 128 2 2191 112 0 3 chr5 62017108 62017418 -141068114 + AluSx SINE Alu 1 309 0 205 297 0 16 chr5 62017436 62017500 -141068032 + GA-rich Low_complexity Low_complexity 2 64 0 707 125 0 8 chr5 62017532 62017660 -141067872 + (GGA)n Simple_repeat Simple_repeat 3 129 0 331 264 82 69 chr5 62018227 62018246 -141067286 + MIR SINE MIR 18 35 -227 2304 99 10 0 chr5 62018246 62018548 -141066984 + AluSq SINE Alu 1 305 -8 331 264 82 69 chr5 62018548 62018687 -141066845 + MIR SINE MIR 35 178 -84 2069 108 11 0 chr5 62018687 62018966 -141066566 + AluSq SINE Alu 23 304 -9 518 276 36 47 chr5 62018990 62019182 -141066350 + MIR SINE MIR 70 259 -3 1289 213 13 54 chr5 62019664 62019809 -141065723 + AluJo SINE Alu 2 151 -151 1888 125 29 7 chr5 62019809 62020088 -141065444 + AluSx SINE Alu 11 295 -17 1289 213 13 54 chr5 62020088 62020256 -141065276 + AluJo SINE Alu 151 302 0 801 263 191 4 chr5 62020399 62020875 -141064657 + L1M4 LINE L1 3995 4559 -1587 1955 124 48 3 chr5 62020879 62021169 -141064363 + AluSx SINE Alu 1 303 -9 2731 213 38 45 chr5 62021179 62021733 -141063799 - L1MCc LINE L1 -2982 3444 2897 1912 92 53 25 chr5 62021733 62022054 -141063478 - AluSx SINE Alu 0 312 1 2731 213 38 45 chr5 62022054 62022336 -141063196 - L1MCc LINE L1 -3529 2897 2614 298 262 16 0 chr5 62022354 62022415 -141063117 - Tigger2a DNA MER2_type -10 424 363 660 206 56 0 chr5 62022439 62022565 -141062967 - FLAM_A SINE Alu 0 133 1 2101 113 25 91 chr5 62022572 62022729 -141062803 - Tigger2a DNA MER2_type -2337 371 205 501 88 25 0 chr5 62022729 62022809 -141062723 + L1PB1 LINE L1 6069 6150 -1 2101 113 25 91 chr5 62022809 62023048 -141062484 - Tigger2a DNA MER2_type -2503 205 1 289 158 8 158 chr5 62023048 62023110 -141062422 - L1MCc LINE L1 -3952 2655 2585 2262 92 7 0 chr5 62023110 62023403 -141062129 - AluSx SINE Alu -17 295 1 809 183 16 0 chr5 62023406 62023532 -141062000 - FLAM_A SINE Alu -5 128 1 289 158 8 158 chr5 62023532 62023585 -141061947 - L1MCc LINE L1 -4024 2583 2554 6255 118 172 57 chr5 62023611 62024016 -141061516 - L1MCc LINE L1 -3897 2529 2172 2204 102 0 3 chr5 62024016 62024300 -141061232 + AluSg SINE Alu 1 283 -27 6255 118 172 57 chr5 62024300 62024858 -141060674 - L1MCc LINE L1 -4254 2172 1679 865 182 0 0 chr5 62024858 62024990 -141060542 - FLAM_C SINE Alu 0 133 2 6255 118 172 57 chr5 62024990 62025392 -141060140 - L1MCc LINE L1 -4747 1679 1325 2005 124 47 0 chr5 62025392 62025690 -141059842 - AluSx SINE Alu 0 312 1 6255 118 172 57 chr5 62025690 62025773 -141059759 - L1MCc LINE L1 -5101 1325 911 1444 162 43 10 chr5 62026184 62026792 -141058740 - L1MCc LINE L1 -5488 938 198 1065 223 25 17 chr5 62026794 62027032 -141058500 - L1MCc LINE L1 -6173 253 14 2013 127 3 25 chr5 62027046 62027362 -141058170 + AluY SINE Alu 2 310 -1 2305 265 72 31 chr5 62027431 62027689 -141057843 + L1ME3A LINE L1 5317 5563 -607 1848 146 0 36 chr5 62027689 62027998 -141057534 + AluJo SINE Alu 1 298 -14 2305 265 72 31 chr5 62027998 62028547 -141056985 + L1ME3A LINE L1 5563 6157 -13 2126 117 157 21 chr5 62028832 62029209 -141056323 + MSTA LTR MaLR 1 428 0 190 302 0 16 chr5 62029224 62029287 -141056245 - L3 LINE CR1 -13 1564 1503 1370 190 147 150 chr5 62029517 62030163 -141055369 - MLT1G1 LTR MaLR 0 590 1 2194 114 0 7 chr5 62030313 62030610 -141054922 - AluSx SINE Alu -17 295 1 195 333 73 85 chr5 62030764 62030941 -141054591 + MIR SINE MIR 19 193 -69 8404 103 27 75 chr5 62030981 62031520 -141054012 + Tigger1 DNA MER2_type 1 564 -1854 2171 125 0 35 chr5 62031520 62031839 -141053693 + AluSx SINE Alu 1 308 -4 8404 103 27 75 chr5 62031839 62031867 -141053665 + Tigger1 DNA MER2_type 564 592 -1826 6768 46 1 0 chr5 62031867 62032649 -141052883 + L1PA7 LINE L1 5372 6154 0 8404 103 27 75 chr5 62032649 62033514 -141052018 + Tigger1 DNA MER2_type 592 1365 -1053 763 106 18 0 chr5 62034103 62034216 -141051316 + Tigger1 DNA MER2_type 1363 1477 -941 2181 104 38 0 chr5 62034219 62034507 -141051025 + AluSg SINE Alu 1 299 -11 1244 166 14 5 chr5 62034516 62034727 -141050805 + AluJb SINE Alu 85 297 -15 839 88 18 0 chr5 62034728 62034841 -141050691 + Tigger1 DNA MER2_type 1471 1585 -833 3448 121 16 4 chr5 62034888 62035393 -141050139 + Tigger1 DNA MER2_type 1577 2087 -331 874 262 0 0 chr5 62035394 62035558 -141049974 + FRAM SINE Alu 1 164 -12 2035 144 50 0 chr5 62035558 62035877 -141049655 + Tigger1 DNA MER2_type 2084 2418 0 2281 112 0 0 chr5 62036398 62036693 -141048839 + AluSx SINE Alu 4 298 -14 2303 113 0 0 chr5 62036867 62037178 -141048354 + AluSx SINE Alu 1 311 -1 304 250 66 0 chr5 62037431 62037507 -141048025 + MER81 DNA DNA 1 81 -33 277 128 0 0 chr5 62037516 62037555 -141047977 - Alu SINE Alu -262 40 2 1189 128 57 38 chr5 62037574 62037785 -141047747 + AluSq SINE Alu 85 299 -14 2236 124 0 3 chr5 62037793 62038099 -141047433 + AluSx SINE Alu 1 305 -7 1961 137 6 19 chr5 62038216 62038561 -141046971 - AluSx SINE Alu 0 341 1 376 241 172 0 chr5 62038605 62038750 -141046782 + L1MC4 LINE L1 7587 7756 -286 9640 146 54 8 chr5 62038775 62041623 -141043909 + L1PB1 LINE L1 58 3246 -3616 3274 128 43 17 chr5 62041623 62042156 -141043376 + LTR10A LTR ERV1 1 547 -62 13466 186 9 34 chr5 62042169 62043154 -141042378 + L1PB1 LINE L1 3243 4251 -2616 2206 105 10 0 chr5 62043154 62043448 -141042084 + AluSp SINE Alu 1 297 -16 1623 147 121 0 chr5 62043458 62043730 -141041802 + AluSx SINE Alu 1 305 -7 13466 186 9 34 chr5 62043730 62044523 -141041009 + L1PB1 LINE L1 4260 5071 -1796 2330 107 0 0 chr5 62044523 62044831 -141040701 + AluSc SINE Alu 1 308 -1 13466 186 9 34 chr5 62044831 62045878 -141039654 + L1PB1 LINE L1 5071 6019 -848 2258 94 3 0 chr5 62045878 62046165 -141039367 + AluSp SINE Alu 1 288 -25 13466 186 9 34 chr5 62046165 62046337 -141039195 + L1PB1 LINE L1 6019 6194 -673 226 81 0 0 chr5 62046338 62046375 -141039157 + AluSp SINE Alu 264 300 0 2406 134 24 5 chr5 62046386 62046760 -141038772 + L1PB1 LINE L1 6486 6866 -1 759 148 0 9 chr5 62046785 62046893 -141038639 - FLAM_C SINE Alu -35 108 2 246 301 80 11 chr5 62046895 62047071 -141038461 + L1MC4 LINE L1 7744 7931 -111 1680 215 0 0 chr5 62047548 62047850 -141037682 - AluJb SINE Alu -8 304 3 2673 33 0 3 chr5 62048402 62048706 -141036826 - AluY SINE Alu -7 304 2 243 122 0 0 chr5 62049482 62049531 -141036001 + (TC)n Simple_repeat Simple_repeat 2 50 0 288 0 0 0 chr5 62049531 62049563 -141035969 + (CA)n Simple_repeat Simple_repeat 1 32 0 313 265 116 27 chr5 62049798 62049945 -141035587 - MIR SINE MIR -40 222 63 452 300 46 58 chr5 62050031 62050255 -141035277 - L2 LINE L2 0 3313 3091 1322 199 161 8 chr5 62050255 62050516 -141035016 + AluJo SINE Alu 1 301 -1 452 300 46 58 chr5 62050516 62050531 -141035001 - L2 LINE L2 -222 3091 3077 1285 267 72 72 chr5 62050555 62050594 -141034938 + MLT1K LTR MaLR 20 58 -530 1829 166 3 17 chr5 62050594 62050890 -141034642 + AluJo SINE Alu 1 292 -20 1285 267 72 72 chr5 62050890 62051374 -141034158 + MLT1K LTR MaLR 57 543 -45 2267 116 3 0 chr5 62051453 62051764 -141033768 - AluSq SINE Alu -1 312 1 440 336 14 32 chr5 62051786 62052003 -141033529 - L2 LINE L2 -217 3055 2843 1021 196 6 6 chr5 62052135 62052308 -141033224 - FAM SINE Alu -2 173 1 591 256 99 11 chr5 62052392 62052583 -141032949 + L1MC5 LINE L1 7260 7467 -494 2394 102 0 0 chr5 62052601 62052905 -141032627 + AluSg SINE Alu 1 304 -6 554 231 39 0 chr5 62052930 62053034 -141032498 + FLAM_A SINE Alu 1 108 -34 685 252 0 0 chr5 62053066 62053193 -141032339 - FLAM_C SINE Alu -6 127 1 289 217 75 28 chr5 62053222 62053328 -141032204 + L1MC5 LINE L1 7546 7656 -305 2271 91 14 0 chr5 62053330 62053742 -141031790 + AluSp SINE Alu 1 416 0 274 106 0 0 chr5 62053771 62053818 -141031714 + AluSc SINE Alu 252 298 -1 2086 128 0 0 chr5 62053847 62054129 -141031403 + AluSx SINE Alu 6 287 -25 270 299 0 0 chr5 62054184 62054251 -141031281 - L2 LINE L2 -1 3312 3246 1371 105 0 0 chr5 62054280 62054461 -141031071 + AluSc SINE Alu 127 307 -2 2199 103 14 0 chr5 62054476 62054757 -141030775 + AluSx SINE Alu 1 309 0 196 42 0 0 chr5 62054757 62054781 -141030751 + (TAA)n Simple_repeat Simple_repeat 2 180 0 368 209 28 119 chr5 62054786 62054816 -141030716 + L1MC5 LINE L1 7661 7692 -269 22 0 0 0 chr5 62054816 62054838 -141030694 + AT_rich Low_complexity Low_complexity 1 22 0 368 209 28 119 chr5 62054838 62054963 -141030569 + L1MC5 LINE L1 7692 7821 -140 940 216 0 0 chr5 62054965 62055136 -141030396 + FRAM SINE Alu 1 162 -14 2205 120 3 0 chr5 62055146 62055437 -141030095 + AluSx SINE Alu 1 292 -20 236 189 19 104 chr5 62055442 62055548 -141029984 + L1MC5 LINE L1 7832 7928 -33 36 62 0 0 chr5 62055518 62055582 -141029950 + AT_rich Low_complexity Low_complexity 1 64 0 * 788 175 0 7 chr5 62055879 62056022 -141029510 + FLAM_C SINE Alu 2 143 0 809 311 65 3 chr5 62056090 62056472 -141029060 - LTR33 LTR ERVL -115 406 1 188 241 75 113 chr5 62056556 62056689 -141028843 + MIR SINE MIR 125 252 -10 529 245 35 0 chr5 62056743 62056886 -141028646 - L1MA4 LINE L1 0 6300 6153 913 184 57 0 chr5 62056886 62057044 -141028488 - FRAM SINE Alu -9 167 1 425 177 48 40 chr5 62057048 62057172 -141028360 - L1MA4 LINE L1 -138 6162 6038 283 279 0 0 chr5 62057201 62057269 -141028263 + L2 LINE L2 3246 3313 0 337 286 174 19 chr5 62057301 62057462 -141028070 - MIR SINE MIR -70 192 7 753 234 81 9 chr5 62057831 62058053 -141027479 - MIR SINE MIR -8 254 17 2251 89 10 16 chr5 62058416 62058720 -141026812 + AluSg SINE Alu 1 302 -8 225 94 0 0 chr5 62058828 62058860 -141026672 + (CTTA)n Simple_repeat Simple_repeat 3 34 0 732 183 0 0 chr5 62058860 62058975 -141026557 - FLAM_A SINE Alu -18 115 1 1045 272 108 18 chr5 62059239 62059629 -141025903 - LTR16A LTR ERVL -7 443 19 295 250 0 0 chr5 62059890 62059958 -141025574 - MER2 DNA MER2_type -277 68 1 1794 147 118 23 chr5 62060054 62060400 -141025132 - MLT1B LTR MaLR -8 382 4 1961 127 10 27 chr5 62060789 62061089 -141024443 + AluSx SINE Alu 1 295 -17 1716 176 33 16 chr5 62061294 62061600 -141023932 - AluJb SINE Alu -1 311 1 1578 144 65 31 chr5 62062134 62062426 -141023106 + AluJo SINE Alu 1 302 -10 2299 112 0 13 chr5 62062753 62063067 -141022465 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr5 62063194 62063222 -141022310 + AT_rich Low_complexity Low_complexity 1 28 0 248 182 23 0 chr5 62063222 62063266 -141022266 - MER57A LTR ERV1 -64 339 295 1148 207 111 32 chr5 62063441 62063764 -141021768 - AluJo SINE Alu 0 345 1 305 136 0 0 chr5 62063786 62063830 -141021702 + MLT1D LTR MaLR 26 69 -436 1565 234 184 27 chr5 62063837 62064434 -141021098 - MER21B LTR ERV1 -75 788 98 344 117 127 44 chr5 62064427 62064531 -141021001 + AluS SINE Alu 231 301 0 * 2309 115 0 0 chr5 62064614 62064910 -141020622 + AluSx SINE Alu 1 296 -16 2562 65 3 0 chr5 62065513 62065820 -141019712 + AluY SINE Alu 1 308 -3 2305 105 13 0 chr5 62065833 62066168 -141019364 + AluSg SINE Alu 1 339 0 1816 156 22 0 chr5 62066343 62066642 -141018890 + AluSx SINE Alu 1 305 0 328 265 0 0 chr5 62066859 62066927 -141018605 - MER21B LTR ERV1 -767 96 29 1437 182 69 67 chr5 62066966 62067310 -141018222 + MLT1D LTR MaLR 90 439 -66 2352 90 7 3 chr5 62067310 62067611 -141017921 - AluY SINE Alu -8 303 2 1437 182 69 67 chr5 62067611 62067662 -141017870 + MLT1D LTR MaLR 439 488 -17 860 161 0 0 chr5 62067746 62067870 -141017662 - FLAM_C SINE Alu -19 124 1 1419 203 63 18 chr5 62067882 62068168 -141017364 - AluJo SINE Alu -13 299 1 2269 90 57 28 chr5 62068182 62068536 -141016996 - THE1B LTR MaLR 0 364 1 244 296 224 0 chr5 62068645 62068743 -141016789 - L2 LINE L2 0 3313 3194 2294 100 3 0 chr5 62068743 62069034 -141016498 - AluSc SINE Alu -2 307 16 376 194 43 22 chr5 62069112 62069222 -141016310 - L1MC5 LINE L1 0 8042 7831 2127 86 41 21 chr5 62069229 62069386 -141016146 - AluSp SINE Alu -14 299 132 2317 91 24 0 chr5 62069386 62069683 -141015849 - AluSc SINE Alu -5 304 1 2127 86 41 21 chr5 62069683 62069815 -141015717 - AluSp SINE Alu -181 132 4 296 278 111 14 chr5 62069815 62069959 -141015573 + Charlie8 DNA MER1_type 51 208 -2209 868 153 7 0 chr5 62070110 62070247 -141015285 - FLAM_C SINE Alu -4 139 2 1406 185 54 4 chr5 62070276 62070536 -141014996 - AluJb SINE Alu -27 285 13 2290 91 0 0 chr5 62070562 62070848 -141014684 - AluSx SINE Alu -26 286 1 215 31 31 0 chr5 62071206 62071238 -141014294 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1864 144 0 4 chr5 62071242 62071513 -141014019 - AluSc SINE Alu -31 278 9 658 213 39 0 chr5 62072143 62072270 -141013262 + FLAM_C SINE Alu 2 133 0 582 281 12 6 chr5 62072612 62072783 -141012749 + MIR SINE MIR 1 172 -90 305 195 0 0 chr5 62072800 62072864 -141012668 - MLT1F LTR MaLR -8 534 481 2355 92 0 35 chr5 62072925 62073242 -141012290 - AluSq SINE Alu -7 306 1 2193 103 0 10 chr5 62073242 62073543 -141011989 - AluSx SINE Alu -14 298 1 2228 117 0 0 chr5 62073631 62073930 -141011602 + AluSx SINE Alu 1 299 -13 2117 104 3 38 chr5 62073986 62074303 -141011229 + AluSp SINE Alu 1 306 -7 2387 104 3 0 chr5 62074309 62074616 -141010916 + AluSx SINE Alu 1 308 -4 1773 168 3 26 chr5 62074934 62075238 -141010294 - AluJo SINE Alu -15 297 1 21 0 0 0 chr5 62075347 62075368 -141010164 + AT_rich Low_complexity Low_complexity 1 21 0 2234 123 3 3 chr5 62075493 62075803 -141009729 - AluSx SINE Alu -2 310 1 184 54 71 36 chr5 62075839 62075895 -141009637 + T-rich Low_complexity Low_complexity 2 59 0 1948 147 0 10 chr5 62076071 62076377 -141009155 + AluSq SINE Alu 1 303 -10 2180 132 3 0 chr5 62076459 62076763 -141008769 - AluSq SINE Alu -8 305 1 1258 168 0 47 chr5 62076950 62077182 -141008350 - AluJo SINE Alu -91 221 1 755 203 7 14 chr5 62077302 62077450 -141008082 - AluJb SINE Alu -84 228 82 860 183 0 0 chr5 62077486 62077623 -141007909 - AluJb SINE Alu -19 293 157 357 316 32 16 chr5 62077777 62078030 -141007502 - L1MC/D LINE L1 -2289 5519 5263 2001 134 10 0 chr5 62078146 62078468 -141007064 - AluSq SINE Alu 0 313 1 664 162 0 8 chr5 62078735 62078852 -141006680 + FLAM_C SINE Alu 14 129 -14 234 0 0 0 chr5 62079005 62079031 -141006501 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2252 95 0 0 chr5 62079033 62079316 -141006216 - AluSq SINE Alu -30 283 1 2288 59 76 3 chr5 62080002 62080292 -141005240 + AluY SINE Alu 1 311 0 2107 123 7 0 chr5 62080344 62080637 -141004895 + AluSx SINE Alu 1 295 -17 1827 157 3 26 chr5 62080748 62081053 -141004479 + AluJb SINE Alu 3 300 -12 1975 137 24 7 chr5 62081064 62081357 -141004175 + AluSx SINE Alu 1 298 -14 200 208 0 21 chr5 62081563 62081611 -141003921 + GA-rich Low_complexity Low_complexity 2 48 0 1948 92 48 7 chr5 62082072 62082364 -141003168 - AluSc SINE Alu -5 304 1 521 216 0 0 chr5 62082609 62082706 -141002826 - AluJ SINE Alu -96 216 120 800 93 7 120 chr5 62082722 62082872 -141002660 - AluJ SINE Alu -169 133 1 33 25 0 0 chr5 62083134 62083174 -141002358 + AT_rich Low_complexity Low_complexity 1 40 0 1861 153 3 30 chr5 62083176 62083476 -141002056 + AluJo SINE Alu 1 292 -20 1185 100 12 0 chr5 62083502 62083662 -141001870 - AluSg/x SINE Alu -16 296 135 2265 98 0 16 chr5 62083663 62083978 -141001554 - AluSq SINE Alu -3 310 1 12858 167 71 66 chr5 62083978 62084573 -141000959 - L1 LINE L1 -1154 6411 5821 2133 102 7 11 chr5 62084573 62084885 -141000647 - AluSx SINE Alu 0 311 1 12858 167 71 66 chr5 62084885 62085136 -141000396 - L1 LINE L1 -1744 5821 5573 1774 179 30 0 chr5 62085136 62085316 -141000216 - AluJb SINE Alu 0 312 118 297 0 0 0 chr5 62085316 62085349 -141000183 + (TG)n Simple_repeat Simple_repeat 2 34 0 1774 179 30 0 chr5 62085349 62085470 -141000062 - AluJb SINE Alu -194 118 2 12858 167 71 66 chr5 62085470 62086397 -140999135 - L1 LINE L1 -1992 5573 4653 2296 116 0 0 chr5 62086397 62086700 -140998832 - AluSg SINE Alu -7 303 1 12858 167 71 66 chr5 62086700 62086768 -140998764 - L1 LINE L1 -2912 4653 4587 2249 105 0 3 chr5 62086768 62087063 -140998469 + AluSq SINE Alu 1 294 -19 12858 167 71 66 chr5 62087063 62087241 -140998291 - L1 LINE L1 -2978 4587 4411 2042 109 15 67 chr5 62087241 62087570 -140997962 - AluSx SINE Alu 0 312 1 12858 167 71 66 chr5 62087570 62088857 -140996675 - L1 LINE L1 -3154 4411 3132 1946 150 0 7 chr5 62088857 62089150 -140996382 - AluJb SINE Alu -21 291 1 12858 167 71 66 chr5 62089150 62089166 -140996366 - L1 LINE L1 -4433 3132 3118 2265 114 3 0 chr5 62089166 62089464 -140996068 - AluSp SINE Alu -14 299 1 12858 167 71 66 chr5 62089464 62089486 -140996046 - L1 LINE L1 -4447 3118 3098 1759 151 29 7 chr5 62089486 62089765 -140995767 - AluSx SINE Alu -27 285 1 12858 167 71 66 chr5 62089765 62089907 -140995625 - L1 LINE L1 -4467 3098 2958 2306 96 0 16 chr5 62089907 62090219 -140995313 - AluSg SINE Alu -3 307 1 12858 167 71 66 chr5 62090219 62090680 -140994852 - L1 LINE L1 -4607 2958 2501 1692 118 118 31 chr5 62090680 62090968 -140994564 - AluSq SINE Alu 0 313 1 12858 167 71 66 chr5 62090968 62090998 -140994534 - L1 LINE L1 -5064 2501 2473 2453 89 0 0 chr5 62090998 62091301 -140994231 - AluSp SINE Alu -10 303 1 12858 167 71 66 chr5 62091301 62091578 -140993954 - L1 LINE L1 -5092 2473 2199 2019 110 58 3 chr5 62091578 62091870 -140993662 + AluSx SINE Alu 1 308 -4 12858 167 71 66 chr5 62091870 62092357 -140993175 - L1 LINE L1 -5366 2199 1716 2215 141 98 28 chr5 62092357 62092687 -140992845 + MSTA LTR MaLR 3 367 -61 2043 147 7 0 chr5 62092687 62092994 -140992538 + AluSg SINE Alu 2 310 0 2215 141 98 28 chr5 62092994 62093061 -140992471 + MSTA LTR MaLR 367 428 0 12858 167 71 66 chr5 62093061 62093154 -140992378 - L1 LINE L1 -5849 1716 1625 1977 146 17 0 chr5 62093154 62093456 -140992076 + AluSx SINE Alu 1 307 -5 451 104 0 0 chr5 62093456 62093523 -140992009 + MSTA LTR MaLR 362 428 0 12858 167 71 66 chr5 62093523 62093611 -140991921 - L1 LINE L1 -5940 1625 1539 2014 123 11 0 chr5 62093611 62093888 -140991644 + AluSx SINE Alu 1 280 -32 230 0 33 0 chr5 62093888 62093918 -140991614 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 12858 167 71 66 chr5 62093918 62094572 -140990960 - L1 LINE L1 -6026 1539 1076 1808 168 0 38 chr5 62094572 62094887 -140990645 - AluJb SINE Alu -9 303 1 12858 167 71 66 chr5 62094887 62095633 -140989899 - L1 LINE L1 -6489 1076 336 506 200 240 20 chr5 62095643 62095699 -140989833 + MER45B DNA AcHobo 849 891 -690 2166 126 0 19 chr5 62095699 62095984 -140989548 + AluSx SINE Alu 1 281 -31 236 30 30 0 chr5 62095984 62096017 -140989515 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 2166 126 0 19 chr5 62096017 62096049 -140989483 + AluSx SINE Alu 281 312 0 506 200 240 20 chr5 62096049 62096142 -140989390 + MER45B DNA AcHobo 891 1031 -9 755 323 88 17 chr5 62096558 62096852 -140988680 + MLT1G1 LTR MaLR 281 595 0 605 272 31 31 chr5 62096928 62097119 -140988413 + MIR SINE MIR 8 198 -64 1392 107 10 5 chr5 62097122 62097318 -140988214 + AluSg SINE Alu 1 197 -113 476 62 47 0 chr5 62097319 62097383 -140988149 + AluY SINE Alu 66 132 -179 376 120 18 0 chr5 62097700 62097770 -140987762 - Alu SINE Alu -248 53 1 21 0 0 0 chr5 62097804 62097825 -140987707 + AT_rich Low_complexity Low_complexity 1 21 0 2210 103 3 35 chr5 62097827 62098138 -140987394 + AluSq SINE Alu 1 301 -12 2124 90 33 37 chr5 62098139 62098439 -140987093 + AluSx SINE Alu 1 299 -13 33 43 0 0 chr5 62098556 62098603 -140986929 + AT_rich Low_complexity Low_complexity 1 47 0 1294 148 98 56 chr5 62098767 62098875 -140986657 - LTR54 LTR ERV1 0 510 408 2241 98 0 0 chr5 62098875 62099162 -140986370 - AluSg SINE Alu -14 296 10 1294 148 98 56 chr5 62099162 62099479 -140986053 - LTR54 LTR ERV1 -102 408 1 383 182 76 0 chr5 62099795 62099861 -140985671 + L1M1 LINE L1 15 85 -7480 4368 170 3 19 chr5 62099863 62100564 -140984968 + L1M1 LINE L1 1297 1986 -5579 667 163 0 6 chr5 62100567 62100825 -140984707 + AluJ SINE Alu 3 309 -3 2412 100 3 0 chr5 62100828 62101137 -140984395 + AluSp SINE Alu 3 312 -1 212 302 0 16 chr5 62101157 62101220 -140984312 - L2 LINE L2 -2075 1239 1178 524 284 43 0 chr5 62101626 62101788 -140983744 + MER20B DNA MER1_type 243 411 -372 1268 115 0 0 chr5 62101797 62101962 -140983570 + AluSx SINE Alu 44 208 -104 2985 93 181 26 chr5 62101964 62102493 -140983039 - LTR10E LTR ERV1 -21 612 2 667 134 0 0 chr5 62102493 62102590 -140982942 + AluSp/q SINE Alu 204 300 -13 511 256 110 0 chr5 62102617 62102781 -140982751 + MER20B DNA MER1_type 441 622 -161 2149 128 3 0 chr5 62102851 62103141 -140982391 + AluSx SINE Alu 1 291 -21 814 197 0 0 chr5 62103723 62103860 -140981672 - FAM SINE Alu -18 167 31 2095 116 10 7 chr5 62103929 62104232 -140981300 + AluSc SINE Alu 1 304 -5 2464 32 0 0 chr5 62104608 62104942 -140980590 + AluY SINE Alu 1 334 0 237 345 0 0 chr5 62105115 62105202 -140980330 + L2 LINE L2 3227 3313 0 456 289 138 52 chr5 62105840 62106203 -140979329 - MLT1K LTR MaLR -14 574 181 2315 110 0 3 chr5 62106203 62106513 -140979019 - AluSg SINE Alu -1 309 1 2543 53 0 7 chr5 62106531 62106834 -140978698 - AluY SINE Alu -10 301 1 226 282 58 64 chr5 62106836 62106992 -140978540 + L2 LINE L2 2322 2476 -838 1940 120 67 0 chr5 62107161 62107445 -140978087 - AluSq SINE Alu -9 304 2 781 143 16 0 chr5 62107450 62107576 -140977956 - FLAM_C SINE Alu -4 129 2 260 318 73 21 chr5 62107636 62107828 -140977704 - L2 LINE L2 -189 3083 2882 440 320 17 12 chr5 62107832 62108004 -140977528 + L2 LINE L2 2583 2755 -559 2151 125 7 0 chr5 62108138 62108441 -140977091 - AluSx SINE Alu -7 305 1 285 179 179 0 chr5 62108622 62108689 -140976843 - L2 LINE L2 0 3313 3235 220 233 50 17 chr5 62108822 62108882 -140976650 - MIR SINE MIR -195 67 6 584 114 0 0 chr5 62108980 62109059 -140976473 + AluJb SINE Alu 58 136 -176 271 157 0 0 chr5 62109063 62109114 -140976418 + Alu SINE Alu 252 302 0 4116 28 0 0 chr5 62109172 62109639 -140975893 + L1PA5 LINE L1 5426 5892 -262 1764 134 0 59 chr5 62109639 62109945 -140975587 - AluJb SINE Alu -22 290 3 842 127 0 0 chr5 62110094 62110212 -140975320 - FLAM_C SINE Alu -15 118 1 742 149 44 0 chr5 62111175 62111289 -140974243 + FLAM_C SINE Alu 3 121 -22 328 53 0 35 chr5 62111289 62111346 -140974186 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 584 203 28 42 chr5 62111396 62111527 -140974005 + FLAM_C SINE Alu 2 132 -180 1856 166 3 10 chr5 62111527 62111840 -140973692 + AluJb SINE Alu 1 311 -1 584 203 28 42 chr5 62111840 62111851 -140973681 + FLAM_C SINE Alu 132 142 -170 2372 82 0 22 chr5 62111901 62112217 -140973315 - AluSg SINE Alu -1 309 1 2101 122 7 0 chr5 62112314 62112602 -140972930 + AluSx SINE Alu 1 290 -22 579 232 116 56 chr5 62112630 62112781 -140972751 - L1ME4a LINE L1 -78 6043 5902 2426 100 0 0 chr5 62112781 62113091 -140972441 - AluSg SINE Alu 0 310 1 579 232 116 56 chr5 62113091 62113241 -140972291 - L1ME4a LINE L1 -219 5902 5724 758 80 0 0 chr5 62113272 62113372 -140972160 - HY3 scRNA scRNA -1 100 1 2118 100 0 58 chr5 62113454 62113630 -140971902 - AluSg SINE Alu -17 293 141 2411 89 0 3 chr5 62113630 62113943 -140971589 - AluSq SINE Alu -1 312 1 2118 100 0 58 chr5 62113943 62114077 -140971455 - AluSg SINE Alu -169 141 1 22 0 0 0 chr5 62114080 62114102 -140971430 + AT_rich Low_complexity Low_complexity 1 22 0 2242 103 7 3 chr5 62114249 62114550 -140970982 - AluSq SINE Alu -11 302 1 427 161 0 37 chr5 62114731 62114743 -140970789 - AluSq/x SINE Alu -166 146 135 1587 103 32 149 chr5 62114743 62114954 -140970578 - AluYb8 SINE Alu 0 308 152 1866 112 4 4 chr5 62114954 62115213 -140970319 - AluSq SINE Alu -54 259 1 1587 103 32 149 chr5 62115213 62115349 -140970183 - AluYb8 SINE Alu -156 152 2 427 161 0 37 chr5 62115349 62115417 -140970115 - AluSq/x SINE Alu -177 135 69 1267 84 0 114 chr5 62115417 62115509 -140970023 - AluSp SINE Alu -110 203 151 2559 49 3 10 chr5 62115509 62115816 -140969716 - AluY SINE Alu -6 305 1 1267 84 0 114 chr5 62115816 62115950 -140969582 - AluSp SINE Alu -162 151 3 1743 148 54 4 chr5 62115958 62116236 -140969296 - AluSx SINE Alu -20 292 1 221 259 12 37 chr5 62118105 62118186 -140967346 + CT-rich Low_complexity Low_complexity 3 81 0 1963 97 0 85 chr5 62121646 62121965 -140963567 - AluSq SINE Alu -21 292 1 2105 104 10 17 chr5 62122412 62122710 -140962822 - AluSx SINE Alu -16 296 1 315 323 108 32 chr5 62123126 62123312 -140962220 - MIR SINE MIR -60 202 3 806 208 38 0 chr5 62123528 62123687 -140961845 - AluJo SINE Alu -27 285 121 1809 145 13 19 chr5 62123750 62124061 -140961471 - AluSq SINE Alu -4 309 1 1939 132 10 17 chr5 62124289 62124584 -140960948 - AluSq SINE Alu -20 293 1 1872 109 0 16 chr5 62124902 62125158 -140960374 - AluSx SINE Alu -12 300 49 1784 177 0 3 chr5 62125216 62125504 -140960028 + AluJo SINE Alu 1 287 -25 339 108 108 15 chr5 62125551 62125616 -140959916 + AluJ/FRAM SINE Alu 229 299 -3 561 202 0 0 chr5 62125657 62125756 -140959776 + AluJ/FLAM SINE Alu 2 100 -212 586 133 0 0 chr5 62125803 62125886 -140959646 - AluS SINE Alu -228 84 2 2052 126 11 0 chr5 62126262 62126548 -140958984 - AluSq SINE Alu -24 289 1 2361 87 0 0 chr5 62126548 62126835 -140958697 - AluSg SINE Alu -23 287 1 1900 170 3 0 chr5 62126847 62127147 -140958385 - AluJb SINE Alu -11 301 1 2266 104 0 7 chr5 62127249 62127547 -140957985 + AluSp SINE Alu 2 297 -16 749 239 11 39 chr5 62127643 62127823 -140957709 + AluJo SINE Alu 118 292 -20 1141 179 5 19 chr5 62127930 62128142 -140957390 - AluJb SINE Alu -6 306 98 1946 134 0 0 chr5 62128142 62128410 -140957122 + AluSx SINE Alu 29 296 -16 1975 170 67 10 chr5 62128442 62128843 -140956689 - MSTB LTR MaLR -2 424 1 1436 206 160 59 chr5 62128862 62129423 -140956109 - L1ME1 LINE L1 -74 6092 5589 2108 119 3 26 chr5 62129423 62129733 -140955799 - AluSq SINE Alu -10 303 1 1436 206 160 59 chr5 62129733 62129881 -140955651 - L1ME1 LINE L1 -577 5589 5457 1258 147 181 12 chr5 62129881 62130140 -140955392 + AluJb SINE Alu 1 303 -9 1436 206 160 59 chr5 62130140 62130268 -140955264 - L1ME1 LINE L1 -709 5457 5159 1398 208 39 11 chr5 62130289 62130568 -140954964 + AluJo SINE Alu 11 297 -15 595 193 111 6 chr5 62130571 62130742 -140954790 - L1ME1 LINE L1 -1015 5131 4943 1432 207 14 14 chr5 62130756 62131031 -140954501 - AluJo SINE Alu -33 279 5 422 208 108 17 chr5 62131042 62131162 -140954370 - L1ME1 LINE L1 -1198 4948 4818 372 77 0 0 chr5 62131168 62131220 -140954312 + (TG)n Simple_repeat Simple_repeat 2 53 0 181 271 135 100 chr5 62131732 62131902 -140953630 + MIR SINE MIR 41 216 -46 286 107 36 0 chr5 62132051 62132107 -140953425 + (TA)n Simple_repeat Simple_repeat 2 59 0 2108 138 0 3 chr5 62132125 62132421 -140953111 + AluSx SINE Alu 1 295 -17 919 311 174 12 chr5 62132481 62132623 -140952909 + L2 LINE L2 2199 2317 -996 1844 145 14 27 chr5 62132623 62132920 -140952612 + AluSg SINE Alu 1 293 -17 919 311 174 12 chr5 62132920 62133141 -140952391 + L2 LINE L2 2317 2501 -812 213 65 0 0 chr5 62133141 62133172 -140952360 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1595 123 123 27 chr5 62133172 62133292 -140952240 - AluSq SINE Alu -28 285 178 1892 144 10 7 chr5 62133292 62133583 -140951949 - AluSx SINE Alu -20 292 1 1595 123 123 27 chr5 62133583 62133722 -140951810 - AluSq SINE Alu -135 178 1 919 311 174 12 chr5 62133722 62134274 -140951258 + L2 LINE L2 2500 3255 -58 2357 95 3 10 chr5 62134467 62134772 -140950760 + AluSx SINE Alu 1 303 -9 1579 124 3 182 chr5 62134860 62135240 -140950292 - AluJb SINE Alu 0 312 1 1700 150 26 33 chr5 62135251 62135558 -140949974 - AluSx SINE Alu -7 305 1 2431 83 3 0 chr5 62135723 62136023 -140949509 - AluSc SINE Alu -8 301 1 2474 79 3 0 chr5 62136636 62136939 -140948593 + AluSp SINE Alu 1 304 -9 2156 117 3 0 chr5 62137199 62137490 -140948042 + AluSq SINE Alu 1 292 -21 1975 151 7 3 chr5 62137497 62137801 -140947731 + AluJb SINE Alu 1 305 -7 328 254 254 37 chr5 62138173 62138523 -140947009 - L1MC4a LINE L1 -1870 5938 5513 3435 161 62 6 chr5 62138561 62139234 -140946298 - L1MA4 LINE L1 -2 6298 5588 1423 198 23 4 chr5 62139329 62139587 -140945945 - AluJb SINE Alu -15 297 35 1991 110 76 14 chr5 62139881 62140171 -140945361 + AluSx SINE Alu 1 308 -4 641 195 8 16 chr5 62140344 62140467 -140945065 - FLAM_C SINE Alu -20 123 2 195 42 0 0 chr5 62140745 62140769 -140944763 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1004 145 0 30 chr5 62140772 62140938 -140944594 - AluJb SINE Alu -30 282 122 2101 126 3 0 chr5 62140959 62141245 -140944287 - AluSx SINE Alu -25 287 1 524 139 23 0 chr5 62141247 62141333 -140944199 - AluSq/x SINE Alu -181 132 45 21 36 0 0 chr5 62141347 62141375 -140944157 + AT_rich Low_complexity Low_complexity 1 28 0 2133 102 13 10 chr5 62141519 62141823 -140943709 - AluSx SINE Alu -7 305 1 277 253 89 48 chr5 62141957 62142103 -140943429 - HAL1 LINE L1 -1589 918 767 1522 132 23 0 chr5 62142735 62142955 -140942577 + AluSx SINE Alu 1 225 -87 1244 14 0 0 chr5 62143720 62143858 -140941674 - L1PA5 LINE L1 -11 6143 6006 457 127 113 0 chr5 62144100 62144171 -140941361 - AluS SINE Alu -232 80 2 252 0 0 0 chr5 62144186 62144214 -140941318 + (T)n Simple_repeat Simple_repeat 1 28 0 238 240 0 0 chr5 62144264 62144314 -140941218 + (CCCCG)n Simple_repeat Simple_repeat 5 54 0 187 103 51 0 chr5 62144317 62144356 -140941176 + CT-rich Low_complexity Low_complexity 4 44 0 2195 114 0 3 chr5 62144525 62144831 -140940701 - AluSg SINE Alu -5 305 1 1950 113 11 0 chr5 62144876 62145142 -140940390 - AluY SINE Alu -42 269 1 1127 110 0 0 chr5 62145142 62145288 -140940244 - AluSq/x SINE Alu -166 146 1 432 198 25 12 chr5 62145382 62145463 -140940069 - FRAM/FAM SINE Alu -102 74 1 379 226 0 65 chr5 62145469 62145562 -140939970 - LTR8A LTR ERV1 -56 671 585 376 198 31 27 chr5 62145545 62145651 -140939881 - AluSg/x SINE Alu -165 135 69 * 190 315 27 54 chr5 62146014 62146125 -140939407 + MIR SINE MIR 6 113 -149 1633 184 31 7 chr5 62146161 62146449 -140939083 - AluJb SINE Alu -17 295 1 1956 143 3 3 chr5 62146458 62146752 -140938780 - AluSq SINE Alu -18 295 2 1816 142 3 33 chr5 62147523 62147825 -140937707 + AluSx SINE Alu 6 298 -14 194 62 31 0 chr5 62148404 62148436 -140937096 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 1631 178 0 7 chr5 62148440 62148716 -140936816 - AluJb SINE Alu -38 274 1 660 234 190 21 chr5 62148736 62149026 -140936506 - L1MC4a LINE L1 -298 7510 7172 3819 177 90 30 chr5 62149115 62149911 -140935621 - L1MB5 LINE L1 -8 6166 5419 1638 194 3 25 chr5 62149911 62150230 -140935302 - AluJb SINE Alu 0 312 1 3819 177 90 30 chr5 62150230 62150559 -140934973 - L1MB5 LINE L1 -755 5419 5111 1753 140 90 0 chr5 62150559 62150838 -140934694 - AluSx SINE Alu -8 304 1 3819 177 90 30 chr5 62150838 62151031 -140934501 - L1MB5 LINE L1 -1063 5111 4753 1291 193 16 12 chr5 62151031 62151274 -140934258 + AluJo SINE Alu 45 288 -24 363 58 77 0 chr5 62151279 62151331 -140934201 + L1M LINE L1 5319 5374 -806 466 245 25 19 chr5 62151333 62151492 -140934040 - L1MB5 LINE L1 -1387 4759 4600 4014 124 46 83 chr5 62151521 62152328 -140933204 - LTR1 LTR ERV1 -8 777 1 294 175 0 16 chr5 62152355 62152418 -140933114 - LTR1 LTR ERV1 -723 62 1 1722 172 4 4 chr5 62152418 62152697 -140932835 - AluJb SINE Alu -33 279 1 1239 226 40 49 chr5 62152702 62152808 -140932724 - L1MB5 LINE L1 -1537 4609 4504 2218 116 7 0 chr5 62152808 62153118 -140932414 - AluSx SINE Alu 0 312 1 1239 226 40 49 chr5 62153118 62153462 -140932070 - L1MB5 LINE L1 -1642 4504 4163 694 191 8 0 chr5 62153477 62153608 -140931924 - FAM SINE Alu -36 149 18 2003 196 16 9 chr5 62153629 62154072 -140931460 - L1MB5 LINE L1 -1974 4172 3727 2002 173 34 24 chr5 62154809 62155190 -140930342 - MLT1B LTR MaLR -5 385 1 1614 176 17 7 chr5 62155359 62155648 -140929884 - AluJo SINE Alu -20 292 1 1896 73 55 15 chr5 62155766 62156038 -140929494 - AluSp SINE Alu -30 283 1 1769 123 31 4 chr5 62156111 62156371 -140929161 - AluSg SINE Alu -20 290 24 2143 115 0 37 chr5 62156825 62157146 -140928386 - AluSq SINE Alu -2 311 3 233 246 126 86 chr5 62157153 62157218 -140928314 - L1MC5 LINE L1 -177 7784 7723 2123 114 13 0 chr5 62157218 62157517 -140928015 - AluSq SINE Alu -10 303 1 233 246 126 86 chr5 62157517 62157626 -140927906 - L1MC5 LINE L1 -238 7723 7603 323 236 107 90 chr5 62157677 62157910 -140927622 - L1MC5 LINE L1 -487 7474 7238 248 195 115 18 chr5 62157921 62157937 -140927595 - L1MA10 LINE L1 -2 6332 6317 626 202 188 5 chr5 62157937 62158155 -140927377 - L1ME1 LINE L1 -7 6159 5902 2094 106 4 0 chr5 62158470 62158745 -140926787 + AluSp SINE Alu 1 276 -37 185 0 0 39 chr5 62158749 62158775 -140926757 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1897 158 0 20 chr5 62158830 62159128 -140926404 - AluSx SINE Alu -20 292 1 1589 181 166 30 chr5 62159491 62159984 -140925548 - L1M4b LINE L1 -5667 1192 633 1248 269 131 19 chr5 62160017 62160543 -140924989 - L1M4b LINE L1 -5992 867 192 428 153 18 36 chr5 62160563 62160606 -140924926 + L1M4b LINE L1 60 102 -6757 1492 149 138 4 chr5 62160606 62160874 -140924658 + AluJb SINE Alu 1 304 -8 428 153 18 36 chr5 62160874 62160941 -140924591 + L1M4b LINE L1 102 168 -6691 2263 104 7 0 chr5 62161459 62161767 -140923765 + AluSp SINE Alu 3 312 -1 821 144 0 16 chr5 62161902 62162027 -140923505 + AluJb SINE Alu 1 123 -189 1506 242 114 21 chr5 62162233 62162708 -140922824 - MER21B LTR ERV1 -3 860 342 251 149 64 0 chr5 62162718 62162765 -140922767 - MER21B LTR ERV1 -651 212 163 983 135 4 70 chr5 62162875 62163104 -140922428 - AluJb SINE Alu -97 215 2 846 127 0 0 chr5 62163265 62163383 -140922149 - FLAM_C SINE Alu -15 118 1 747 149 44 0 chr5 62164346 62164460 -140921072 + FLAM_C SINE Alu 3 121 -22 328 53 0 35 chr5 62164460 62164517 -140921015 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 906 206 28 19 chr5 62164567 62164781 -140920751 + AluJo SINE Alu 2 217 -95 2311 118 0 3 chr5 62165566 62165879 -140919653 + AluSx SINE Alu 1 312 0 196 146 21 21 chr5 62166096 62166144 -140919388 + CT-rich Low_complexity Low_complexity 3 50 0 1839 133 10 42 chr5 62166148 62166457 -140919075 - AluSx SINE Alu -13 299 1 327 141 0 0 chr5 62166527 62166591 -140918941 + (TCCCG)n Simple_repeat Simple_repeat 2 65 0 1916 76 4 16 chr5 62166599 62166850 -140918682 - AluSp SINE Alu -65 248 1 1358 126 5 5 chr5 62167997 62168195 -140917337 - AluSq SINE Alu -109 204 7 202 351 99 9 chr5 62168362 62168473 -140917059 - L2 LINE L2 0 3313 3193 706 182 84 49 chr5 62168667 62168810 -140916722 - AluJo SINE Alu -18 284 137 578 182 0 45 chr5 62168810 62168894 -140916638 - AluJo SINE Alu -207 105 26 4082 81 18 36 chr5 62168894 62169496 -140916036 + LTR10C LTR ERV1 1 591 0 578 182 0 45 chr5 62169496 62169521 -140916011 - AluJo SINE Alu -286 26 1 707 256 119 4 chr5 62169977 62170204 -140915328 + MLT1E3 LTR MaLR 323 575 -49 25 0 0 0 chr5 62170206 62170231 -140915301 + AT_rich Low_complexity Low_complexity 1 25 0 2135 120 3 0 chr5 62170233 62170524 -140915008 + AluSx SINE Alu 3 294 -18 487 60 0 0 chr5 62170637 62170704 -140914828 - MER41A LTR ERV1 -88 466 400 832 153 187 25 chr5 62170857 62171060 -140914472 - MER46A DNA MER2_type 0 236 1 26 0 0 0 chr5 62173035 62173061 -140912471 + AT_rich Low_complexity Low_complexity 1 26 0 2187 79 32 0 chr5 62173488 62173789 -140911743 + AluSp SINE Alu 1 310 0 718 164 16 8 chr5 62174406 62174534 -140910998 + FRAM SINE Alu 32 160 -16 188 325 110 73 chr5 62174808 62174973 -140910559 + MIR SINE MIR 7 185 -77 2007 75 82 28 chr5 62174973 62175255 -140910277 + AluSp SINE Alu 1 297 -16 188 325 110 73 chr5 62175255 62175335 -140910197 + MIR SINE MIR 185 261 -1 808 170 7 0 chr5 62175726 62175861 -140909671 + FLAM_C SINE Alu 1 136 -7 21 0 0 0 chr5 62176230 62176251 -140909281 + AT_rich Low_complexity Low_complexity 1 21 0 312 340 11 11 chr5 62176663 62176757 -140908775 - MIR SINE MIR -149 113 20 570 177 0 0 chr5 62176789 62176885 -140908647 - AluJ SINE Alu -25 287 192 859 175 0 7 chr5 62176885 62177028 -140908504 - AluJ SINE Alu -170 142 1 2115 109 0 3 chr5 62177047 62177331 -140908201 - AluSg SINE Alu -27 283 1 2347 96 3 0 chr5 62177344 62177647 -140907885 - AluSg SINE Alu -6 304 1 1776 164 20 24 chr5 62177978 62178271 -140907261 - AluJb SINE Alu -20 292 1 22 0 0 0 chr5 62178294 62178316 -140907216 + AT_rich Low_complexity Low_complexity 1 22 0 1344 81 0 6 chr5 62179010 62179182 -140906350 - AluSg SINE Alu -6 304 134 686 156 19 50 chr5 62179284 62179444 -140906088 - AluSg SINE Alu -155 155 1 1546 176 22 4 chr5 62181830 62182097 -140903435 + AluJb SINE Alu 15 286 -26 1392 193 25 4 chr5 62182174 62182448 -140903084 - AluJo SINE Alu -30 282 3 2608 10 0 23 chr5 62182828 62183131 -140902401 - AluYa5 SINE Alu -4 307 12 21 36 0 0 chr5 62183434 62183462 -140902070 + AT_rich Low_complexity Low_complexity 1 28 0 211 310 7 35 chr5 62184217 62184362 -140901170 + GA-rich Low_complexity Low_complexity 2 142 0 402 243 5 54 chr5 62184471 62184656 -140900876 + A-rich Low_complexity Low_complexity 3 178 0 224 274 29 23 chr5 62184590 62184765 -140900767 + (CAAA)n Simple_repeat Simple_repeat 2 177 0 * 192 100 40 40 chr5 62185081 62185131 -140900401 + C-rich Low_complexity Low_complexity 6 55 0 1571 167 3 90 chr5 62185132 62185444 -140900088 - AluSx SINE Alu -27 285 1 1938 115 44 30 chr5 62185689 62185985 -140899547 - AluSq SINE Alu -13 300 1 2278 189 101 75 chr5 62186356 62187266 -140898266 - L1MB8 LINE L1 -3 6175 5290 207 0 0 0 chr5 62187266 62187289 -140898243 + (CCCCCA)n Simple_repeat Simple_repeat 6 28 0 403 174 294 0 chr5 62187296 62187388 -140898144 - FLAM_A SINE Alu -14 119 1 2278 189 101 75 chr5 62187388 62187462 -140898070 - L1MB8 LINE L1 -893 5285 5110 1545 166 3 33 chr5 62187542 62187843 -140897689 - AluJb SINE Alu -20 292 1 1962 133 17 0 chr5 62187866 62188159 -140897373 - AluSx SINE Alu -14 298 1 448 222 111 9 chr5 62188668 62188776 -140896756 + L2 LINE L2 3193 3311 -2 24 85 0 0 chr5 62188835 62188894 -140896638 + AT_rich Low_complexity Low_complexity 1 59 0 610 164 0 18 chr5 62188964 62189074 -140896458 - AluJb SINE Alu -204 108 1 1632 186 65 0 chr5 62189079 62189369 -140896163 - AluJb SINE Alu -3 309 1 2157 120 7 7 chr5 62189563 62189862 -140895670 + AluSx SINE Alu 1 299 -13 257 173 25 25 chr5 62190335 62190416 -140895116 + CT-rich Low_complexity Low_complexity 3 83 0 243 313 62 17 chr5 62190425 62190601 -140894931 - L1MC/D LINE L1 -2089 5719 5536 1983 150 7 3 chr5 62191128 62191435 -140894097 + AluSx SINE Alu 1 308 -4 449 132 0 0 chr5 62191580 62191648 -140893884 - AluS SINE Alu -242 71 4 308 258 232 13 chr5 62191763 62191914 -140893618 - MIR3 SINE MIR -5 203 20 2571 74 0 0 chr5 62191980 62192290 -140893242 + AluSx SINE Alu 1 310 -2 180 93 37 37 chr5 62192294 62192348 -140893184 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2281 98 7 0 chr5 62192657 62192954 -140892578 + AluSp SINE Alu 1 299 -14 24 0 0 0 chr5 62193034 62193058 -140892474 + AT_rich Low_complexity Low_complexity 1 24 0 706 167 26 0 chr5 62193058 62193172 -140892360 - FLAM_C SINE Alu -15 118 2 2182 130 0 0 chr5 62193347 62193646 -140891886 - AluSx SINE Alu -13 299 1 361 68 0 81 chr5 62194894 62195007 -140890525 - FLAM SINE Alu -11 122 75 226 184 0 0 chr5 62194991 62195029 -140890503 - Alu SINE Alu -265 38 1 * 214 171 37 122 chr5 62195135 62195217 -140890315 - MIR SINE MIR -84 178 104 415 268 126 28 chr5 62195585 62195834 -140889698 - L1MC/D LINE L1 -519 5647 5378 27 0 0 0 chr5 62195914 62195941 -140889591 + AT_rich Low_complexity Low_complexity 1 27 0 330 164 0 0 chr5 62196028 62196083 -140889449 - FLAM SINE Alu -1 132 78 1299 131 5 5 chr5 62196083 62196274 -140889258 - AluSc SINE Alu -118 191 1 519 269 81 22 chr5 62196392 62196615 -140888917 + HERVL40 LTR ERVL 3879 4114 -1416 74 0 0 32 chr5 62196646 62196714 -140888818 + AT_rich Low_complexity Low_complexity 1 68 -22 2310 67 0 0 chr5 62196714 62197019 -140888513 - AluY SINE Alu 0 305 1 74 0 0 32 chr5 62197019 62197042 -140888490 + AT_rich Low_complexity Low_complexity 68 90 0 511 165 0 0 chr5 62197042 62197127 -140888405 - FRAM SINE Alu -21 155 71 14105 142 36 27 chr5 62197251 62197812 -140887720 + L1MA2 LINE L1 1731 2286 -5437 2317 95 3 0 chr5 62197812 62198106 -140887426 + AluSp SINE Alu 1 295 -18 14105 142 36 27 chr5 62198106 62199956 -140885576 + L1MA2 LINE L1 2286 4119 -3604 2315 115 0 0 chr5 62199956 62200252 -140885280 - AluSx SINE Alu -15 297 2 14105 142 36 27 chr5 62200252 62200291 -140885241 + L1MA2 LINE L1 4119 4156 -3567 2159 116 0 7 chr5 62200291 62200593 -140884939 - AluSx SINE Alu -12 300 1 14105 142 36 27 chr5 62200593 62201521 -140884011 + L1MA2 LINE L1 4156 5074 -2649 180 0 0 0 chr5 62201521 62201541 -140883991 + (CAA)n Simple_repeat Simple_repeat 2 21 0 14105 142 36 27 chr5 62201541 62203367 -140882165 + L1MA2 LINE L1 5074 6991 -732 2211 106 0 0 chr5 62203367 62203684 -140881848 + AluSq SINE Alu 1 317 0 14105 142 36 27 chr5 62203684 62204200 -140881332 + L1MA2 LINE L1 6991 7501 -222 856 186 177 19 chr5 62204200 62204517 -140881015 - MER69 DNA AcHobo -315 2211 1845 2318 88 3 7 chr5 62205217 62205523 -140880009 - AluSq SINE Alu -8 305 1 700 208 16 0 chr5 62205818 62205943 -140879589 - FLAM_C SINE Alu -6 127 1 266 354 0 13 chr5 62206161 62206240 -140879292 - MIR3 SINE MIR -118 90 13 1914 158 11 26 chr5 62206439 62206788 -140878744 - MER7A DNA MER2_type 0 346 5 889 133 8 0 chr5 62206840 62206968 -140878564 - FLAM_C SINE Alu -3 130 2 203 345 186 0 chr5 62207382 62207527 -140878005 + MIR3 SINE MIR 34 205 -3 7817 107 76 34 chr5 62207599 62208847 -140876685 - HSMAR2 DNA Mariner -1 1301 1 555 211 9 26 chr5 62209612 62209726 -140875806 - FLAM_A SINE Alu -29 113 2 204 67 0 0 chr5 62209836 62209866 -140875666 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 762 205 48 12 chr5 62210075 62210241 -140875291 - AluJo SINE Alu -18 294 123 2043 120 0 39 chr5 62213705 62214014 -140871518 + AluSx SINE Alu 1 297 -15 1929 100 18 36 chr5 62214382 62214663 -140870869 + AluSx SINE Alu 1 276 -36 390 229 0 8 chr5 62214666 62214788 -140870744 + (TA)n Simple_repeat Simple_repeat 2 122 0 351 235 53 61 chr5 62215059 62215191 -140870341 - MER5B DNA MER1_type -2 176 46 1898 151 10 7 chr5 62215210 62215509 -140870023 - AluSx SINE Alu -11 301 2 1858 163 10 3 chr5 62215600 62215901 -140869631 - AluSx SINE Alu -9 303 1 273 293 61 0 chr5 62215932 62216031 -140869501 + MIR SINE MIR 153 257 -5 818 149 8 22 chr5 62216556 62216690 -140868842 - FLAM_C SINE Alu -10 133 2 1990 149 7 3 chr5 62216919 62217215 -140868317 - AluSx SINE Alu -15 297 1 576 209 164 0 chr5 62217576 62217710 -140867822 - MER58B DNA MER1_type -5 336 181 244 371 119 13 chr5 62219290 62219449 -140866083 - L2 LINE L2 -397 2917 2742 244 286 16 0 chr5 62220265 62220328 -140865204 - MARNA DNA Mariner -399 187 124 205 283 0 0 chr5 62220335 62220381 -140865151 - L2 LINE L2 -17 3255 3210 230 238 12 75 chr5 62220385 62220465 -140865067 + MARNA DNA Mariner 459 533 -53 2182 130 0 0 chr5 62220533 62220832 -140864700 + AluSx SINE Alu 1 299 -13 268 190 25 63 chr5 62221174 62221253 -140864279 + L3 LINE CR1 1232 1307 -270 218 294 43 0 chr5 62221244 62221336 -140864196 + MIR SINE MIR 82 177 -85 * 228 254 100 9 chr5 62221632 62221745 -140863787 - MIR SINE MIR -81 127 30 972 183 172 34 chr5 62221747 62222009 -140863523 - MLT1A1 LTR MaLR 0 365 68 323 313 120 32 chr5 62222162 62222379 -140863153 + L3 LINE CR1 1340 1575 -2 2108 119 3 7 chr5 62222405 62222700 -140862832 - AluSx SINE Alu -18 294 1 2716 182 13 34 chr5 62222855 62223393 -140862139 - Charlie1 DNA MER1_type -1075 1686 1160 2444 218 49 48 chr5 62223411 62223568 -140861964 - Charlie1 DNA MER1_type -1989 772 617 2151 121 17 0 chr5 62223568 62223866 -140861666 - AluSp SINE Alu -10 303 1 2444 218 49 48 chr5 62223866 62223945 -140861587 - Charlie1 DNA MER1_type -2144 617 540 2219 124 3 0 chr5 62223945 62224243 -140861289 - AluSx SINE Alu -10 302 4 2444 218 49 48 chr5 62224243 62224595 -140860937 - Charlie1 DNA MER1_type -2221 540 179 2343 116 55 22 chr5 62224595 62224958 -140860574 - THE1C LTR MaLR 0 375 1 2444 218 49 48 chr5 62224958 62225138 -140860394 - Charlie1 DNA MER1_type -2582 179 1 826 199 0 0 chr5 62225310 62225441 -140860091 + AluJo SINE Alu 2 132 -180 2089 128 13 0 chr5 62226269 62226567 -140858965 + AluSx SINE Alu 1 302 -10 253 133 0 0 chr5 62226712 62226757 -140858775 + LTR66 LTR ERVL 394 438 -172 301 296 23 0 chr5 62226762 62226850 -140858682 - L1MC4 LINE L1 -1339 6703 6614 230 259 70 126 chr5 62227019 62227162 -140858370 - L2 LINE L2 0 3272 3138 997 178 53 0 chr5 62227237 62227389 -140858143 + AluJo SINE Alu 141 300 -2 1550 166 0 66 chr5 62227532 62227852 -140857680 + AluSx SINE Alu 3 301 -1 206 105 26 0 chr5 62228204 62228242 -140857290 + A-rich Low_complexity Low_complexity 2 40 0 807 148 7 49 chr5 62228355 62228497 -140857035 + AluJo SINE Alu 1 136 -176 660 279 82 12 chr5 62228834 62229078 -140856454 + L1ME LINE L1 107 367 -5703 1296 195 109 7 chr5 62229093 62229395 -140856137 + MER2 DNA MER2_type 4 336 -9 379 287 127 0 chr5 62229443 62229593 -140855939 + MIR SINE MIR 82 250 -12 336 260 0 0 chr5 62229598 62229675 -140855857 - MLT1K LTR MaLR 0 588 512 2542 155 25 65 chr5 62229868 62230390 -140855142 + MLT1D LTR MaLR 3 503 -2 473 165 189 0 chr5 62230420 62230547 -140854985 - MER69 DNA AcHobo -15 2511 2361 8951 189 22 21 chr5 62230548 62230743 -140854789 + L1M1 LINE L1 25 218 -7347 2459 98 93 42 chr5 62230743 62230929 -140854603 + MSTA LTR MaLR 1 176 -252 2313 95 7 0 chr5 62230929 62231225 -140854307 + AluSp SINE Alu 3 300 -13 2459 98 93 42 chr5 62231225 62231445 -140854087 + MSTA LTR MaLR 176 428 0 8951 189 22 21 chr5 62231445 62232924 -140852608 + L1M1 LINE L1 218 1701 -5864 394 257 0 0 chr5 62233070 62233144 -140852388 - MER69 DNA AcHobo -926 300 227 282 310 60 10 chr5 62233217 62233317 -140852215 + L2 LINE L2 3141 3245 -27 1043 214 0 0 chr5 62233478 62233660 -140851872 - MER58A DNA MER1_type 0 224 43 1128 123 62 6 chr5 62233717 62233896 -140851636 - AluSq SINE Alu -124 189 1 1479 197 3 52 chr5 62234249 62234559 -140850973 + AluJb SINE Alu 1 295 -17 2213 105 3 0 chr5 62234562 62234857 -140850675 + AluSx SINE Alu 1 296 -16 565 277 118 56 chr5 62235008 62235343 -140850189 - MLT1K LTR MaLR -153 435 71 2755 157 47 14 chr5 62235343 62235828 -140849704 - MLT1D LTR MaLR -4 501 1 565 277 118 56 chr5 62235828 62235882 -140849650 - MLT1K LTR MaLR -517 71 22 393 346 6 32 chr5 62235885 62236041 -140849491 + MIR3 SINE MIR 47 198 -10 243 236 163 49 chr5 62236059 62236182 -140849350 + L1MC/D LINE L1 5495 5631 -2177 219 262 10 39 chr5 62236238 62236310 -140849222 + (TA)n Simple_repeat Simple_repeat 2 72 -29 1530 189 61 0 chr5 62236310 62236590 -140848942 + AluJb SINE Alu 8 304 -8 219 262 10 39 chr5 62236590 62236620 -140848912 + (TA)n Simple_repeat Simple_repeat 72 101 0 2132 139 0 0 chr5 62236712 62237021 -140848511 + AluSx SINE Alu 1 309 -3 4395 133 44 4 chr5 62237158 62237845 -140847687 + MER50 LTR ERV1 1 714 -20 559 285 52 41 chr5 62238176 62238445 -140847087 - L1ME3A LINE L1 -283 5881 5610 817 174 7 21 chr5 62238477 62238621 -140846911 + FLAM_C SINE Alu 2 143 0 933 203 70 48 chr5 62238974 62239201 -140846331 + MER46A DNA MER2_type 5 236 0 2225 130 58 6 chr5 62240622 62240968 -140844564 - THE1B LTR MaLR 0 364 1 326 302 108 22 chr5 62241269 62241408 -140844124 + MIR3 SINE MIR 37 187 -21 1995 167 72 31 chr5 62241468 62242002 -140843530 + MLT2A2 LTR ERVL 1 551 -3 3287 158 112 36 chr5 62242005 62242677 -140842855 - LTR8A LTR ERV1 -4 723 1 186 103 0 0 chr5 62242942 62242971 -140842561 + (CA)n Simple_repeat Simple_repeat 2 30 0 3010 75 8 11 chr5 62243130 62243506 -140842026 - THE1C LTR MaLR 0 375 1 239 230 38 68 chr5 62243527 62243635 -140841897 + MIR SINE MIR 33 137 -99 349 207 197 42 chr5 62244818 62245031 -140840501 - MER5C DNA MER1_type 0 324 79 585 127 0 85 chr5 62245031 62245149 -140840383 + MER50 LTR ERV1 497 604 -130 470 294 70 16 chr5 62245240 62245427 -140840105 + MIR SINE MIR 31 227 -35 208 76 89 13 chr5 62246971 62247050 -140838482 + (TA)n Simple_repeat Simple_repeat 1 85 0 1492 172 0 4 chr5 62247050 62247283 -140838249 - AluJb SINE Alu -80 232 1 760 295 42 64 chr5 62247589 62248230 -140837302 - L1MEd LINE L1 -4972 1147 521 674 283 58 0 chr5 62249040 62249213 -140836319 - MER5A DNA MER1_type 0 189 7 2586 97 26 9 chr5 62249355 62249704 -140835828 + THE1A LTR MaLR 1 355 0 8935 90 15 0 chr5 62249704 62250871 -140834661 + THE1A-int LTR MaLR 1 1185 -395 493 150 55 24 chr5 62250872 62250983 -140834549 + THE1A LTR MaLR 292 355 0 1078 187 76 129 chr5 62251543 62251938 -140833594 + MSTC LTR MaLR 1 371 -57 1817 159 24 3 chr5 62251938 62252255 -140833277 + AluJb SINE Alu 1 312 0 1078 187 76 129 chr5 62252255 62252308 -140833224 + MSTC LTR MaLR 371 425 -3 249 282 182 27 chr5 62252488 62252598 -140832934 - L2 LINE L2 -9 3263 3137 2422 66 0 0 chr5 62253828 62254130 -140831402 - AluY SINE Alu -9 302 1 2163 165 65 18 chr5 62254312 62254755 -140830777 + MLT1C LTR MaLR 1 464 -3 2820 188 35 29 chr5 62254835 62255379 -140830153 + MER44D DNA MER2_type 1 602 -3 324 0 0 0 chr5 62256545 62256581 -140828951 + (CA)n Simple_repeat Simple_repeat 2 37 0 2264 126 13 32 chr5 62256897 62257245 -140828287 - L1MB2 LINE L1 -1 6170 5817 369 0 0 0 chr5 62257245 62257286 -140828246 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1771 169 7 0 chr5 62257288 62257567 -140827965 - AluJb SINE Alu -31 281 1 2264 126 13 32 chr5 62257567 62257587 -140827945 - L1MB2 LINE L1 -355 5816 5806 1073 138 44 89 chr5 62257864 62258089 -140827443 + MER20 DNA MER1_type 2 216 -3 640 161 11 0 chr5 62258775 62258892 -140826640 + L1MA7 LINE L1 6006 6125 -64 1001 121 0 0 chr5 62261203 62261335 -140824197 - FLAM_C SINE Alu -1 132 1 790 162 19 13 chr5 62261335 62261482 -140824050 + L1MA7 LINE L1 6095 6245 -46 22 70 0 0 chr5 62261585 62261628 -140823904 + AT_rich Low_complexity Low_complexity 1 43 0 564 237 192 17 chr5 62262075 62262252 -140823280 + MIR SINE MIR 13 220 -42 2783 43 0 3 chr5 62263205 62263527 -140822005 - L1PA4 LINE L1 -3 6152 5832 2279 97 0 16 chr5 62264008 62264317 -140821215 - AluSx SINE Alu -8 304 1 1936 176 108 61 chr5 62264411 62264586 -140820946 + MLT1C LTR MaLR 3 168 -299 2225 98 0 10 chr5 62264586 62264883 -140820649 + AluY SINE Alu 1 294 -17 1936 176 108 61 chr5 62264883 62265151 -140820381 + MLT1C LTR MaLR 168 467 0 192 254 0 18 chr5 62266664 62266719 -140818813 - MIR SINE MIR -13 249 196 209 213 21 0 chr5 62266728 62266775 -140818757 + GA-rich Low_complexity Low_complexity 1 48 0 242 233 27 14 chr5 62267072 62267145 -140818387 + L2 LINE L2 3198 3271 -1 2252 96 3 3 chr5 62267392 62267684 -140817848 - AluSq SINE Alu -21 292 1 309 178 27 14 chr5 62267887 62267960 -140817572 - MLT1J LTR MaLR -2 509 436 1071 238 68 46 chr5 62268004 62268111 -140817421 - MLT1J LTR MaLR -178 333 230 1885 155 7 7 chr5 62268111 62268407 -140817125 - AluJb SINE Alu -16 296 1 1071 238 68 46 chr5 62268407 62268623 -140816909 - MLT1J LTR MaLR -281 230 3 367 167 15 0 chr5 62268918 62268984 -140816548 - MER5A DNA MER1_type -91 98 32 2681 181 83 95 chr5 62269079 62269815 -140815717 - LTR8A LTR ERV1 0 727 1 209 329 0 14 chr5 62269844 62269917 -140815615 - MER5A DNA MER1_type 0 189 118 1574 223 23 54 chr5 62270271 62270657 -140814875 - MLT1A2 LTR MaLR 0 374 1 2541 167 39 76 chr5 62271678 62272153 -140813379 - MLT2B1 LTR ERVL 0 520 66 2009 143 0 13 chr5 62272153 62272454 -140813078 + AluSx SINE Alu 1 297 -15 2541 167 39 76 chr5 62272454 62272518 -140813014 - MLT2B1 LTR ERVL -454 66 1 2161 143 0 0 chr5 62272582 62272890 -140812642 + AluSg SINE Alu 1 308 -2 1330 244 91 18 chr5 62272905 62273302 -140812230 + MER74B LTR ERVL 123 548 -74 345 200 53 11 chr5 62273219 62273314 -140812218 - MER88 LTR ERVL -287 177 79 * 428 308 75 48 chr5 62274606 62275124 -140810408 - L2 LINE L2 -60 3212 2679 391 229 15 53 chr5 62275110 62275241 -140810291 + MIR SINE MIR 112 237 -25 * 202 182 0 0 chr5 62275381 62275414 -140810118 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 1400 218 163 12 chr5 62275678 62276082 -140809450 + LTR33 LTR ERVL 47 511 -10 2254 219 138 21 chr5 62276178 62276830 -140808702 + HsTC2c DNA MER2_type 2 729 0 632 294 149 21 chr5 62277773 62278208 -140807324 + LTR33 LTR ERVL 23 513 -8 2355 102 0 6 chr5 62278404 62278718 -140806814 + AluSx SINE Alu 1 312 0 1988 133 0 4 chr5 62278934 62279213 -140806319 + AluSq SINE Alu 1 278 -35 280 250 269 0 chr5 62279358 62279466 -140806066 - MER91C DNA MER1_type -2 138 2 298 338 164 0 chr5 62279715 62279916 -140805616 + MIR SINE MIR 23 256 -6 809 210 49 6 chr5 62280394 62280556 -140804976 - AluJo SINE Alu -143 169 1 252 275 88 81 chr5 62280798 62280958 -140804574 - MIR SINE MIR -64 198 38 21 36 0 0 chr5 62281003 62281031 -140804501 + AT_rich Low_complexity Low_complexity 1 28 0 2162 134 7 0 chr5 62281366 62281665 -140803867 - AluSx SINE Alu -11 301 1 860 295 4 20 chr5 62281768 62282019 -140803513 - MIR SINE MIR 0 262 16 1958 157 0 13 chr5 62282185 62282490 -140803042 - AluSx SINE Alu -11 301 1 1754 174 3 34 chr5 62283231 62283553 -140801979 - AluJo SINE Alu 0 312 1 408 238 158 43 chr5 62284279 62284443 -140801089 + MER5A DNA MER1_type 6 188 -1 423 276 123 28 chr5 62284733 62284961 -140800571 + MIR SINE MIR 1 256 -6 21 0 0 0 chr5 62284967 62284988 -140800544 + AT_rich Low_complexity Low_complexity 1 21 0 442 326 92 24 chr5 62285145 62285439 -140800093 + L2 LINE L2 2276 2589 -725 421 243 141 34 chr5 62285643 62285820 -140799712 + L2 LINE L2 3113 3308 -5 408 356 51 5 chr5 62285831 62286047 -140799485 + L2 LINE L2 2740 2965 -349 220 133 22 0 chr5 62286170 62286215 -140799317 + (TTAA)n Simple_repeat Simple_repeat 4 49 0 670 255 125 10 chr5 62286233 62286433 -140799099 + MER58A DNA MER1_type 1 223 -1 190 318 0 0 chr5 62286442 62286486 -140799046 + L2 LINE L2 3162 3205 -67 444 282 73 16 chr5 62287320 62287444 -140798088 - L2 LINE L2 0 3313 3183 * 880 223 144 24 chr5 62287419 62287710 -140797822 - L2 LINE L2 -468 2846 2521 830 203 5 31 chr5 62287889 62288081 -140797451 + LTR41 LTR ERVL 1 187 -586 1658 155 43 69 chr5 62288541 62288916 -140796616 - MSTC LTR MaLR -51 377 13 401 157 14 0 chr5 62288931 62289001 -140796531 - L1PA15 LINE L1 -14 6151 6081 2038 134 31 0 chr5 62289098 62289389 -140796143 - AluSx SINE Alu -12 300 1 687 209 67 0 chr5 62290062 62290196 -140795336 + MIR SINE MIR 13 155 -107 311 198 165 66 chr5 62290462 62290553 -140794979 + MLT1L LTR MaLR 317 416 -199 421 267 220 13 chr5 62290734 62290884 -140794648 + MER5A DNA MER1_type 3 183 -6 401 276 71 0 chr5 62290929 62291027 -140794505 - L2 LINE L2 -21 3292 3188 3380 101 4 2 chr5 62291394 62291860 -140793672 - MER41A LTR ERV1 -86 468 2 3616 174 56 18 chr5 62291861 62292581 -140792951 - L1MD2 LINE L1 -228 6131 5385 43565 35 22 1 chr5 62292620 62298648 -140786884 - L1PA2 LINE L1 0 6155 1 658 262 152 23 chr5 62299837 62300093 -140785439 - L2 LINE L2 -897 2417 2129 480 182 0 55 chr5 62300093 62300203 -140785329 + FRAM SINE Alu 73 176 0 1490 190 3 36 chr5 62300284 62300589 -140784943 + AluJo SINE Alu 1 295 -17 236 229 0 0 chr5 62300591 62300639 -140784893 + Alu SINE Alu 253 300 -2 917 178 29 120 chr5 62300688 62300929 -140784603 + AluJo SINE Alu 41 259 -53 1637 270 74 12 chr5 62300930 62301203 -140784329 - L2 LINE L2 -1326 1988 1733 204 40 0 0 chr5 62301203 62301228 -140784304 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1637 270 74 12 chr5 62301228 62301532 -140784000 - L2 LINE L2 -1581 1733 1375 276 260 0 21 chr5 62301582 62301678 -140783854 - L2 LINE L2 -1365 1949 1856 338 253 135 62 chr5 62301830 62302008 -140783524 + MLT1K LTR MaLR 274 464 -124 1959 162 82 24 chr5 62302044 62302477 -140783055 - MER89 LTR ERV1 0 559 1 236 259 0 0 chr5 62302493 62302551 -140782981 + MLT1K LTR MaLR 522 579 -9 226 304 196 0 chr5 62302644 62302792 -140782740 - MIR SINE MIR -5 257 81 1820 140 7 3 chr5 62303350 62303635 -140781897 + AluJo SINE Alu 21 306 -6 186 43 0 0 chr5 62304310 62304333 -140781199 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 235 241 38 13 chr5 62305096 62305175 -140780357 + L3b LINE CR1 1120 1200 -383 573 15 0 0 chr5 62305927 62305993 -140779539 + (TA)n Simple_repeat Simple_repeat 1 66 0 335 256 139 31 chr5 62306380 62306509 -140779023 + MIR SINE MIR 70 212 -50 22 0 0 0 chr5 62306685 62306707 -140778825 + AT_rich Low_complexity Low_complexity 1 22 0 193 270 0 0 chr5 62306752 62306789 -140778743 + L2 LINE L2 3139 3175 -97 806 194 0 0 chr5 62306977 62307106 -140778426 - FLAM_A SINE Alu -4 129 1 199 350 8 25 chr5 62309006 62309126 -140776406 - L2 LINE L2 -1257 2057 1940 934 179 0 16 chr5 62309766 62309941 -140775591 - FRAM SINE Alu -30 146 1 789 193 126 4 chr5 62310580 62310819 -140774713 - MER20B DNA MER1_type -1 782 515 1264 228 143 2 chr5 62311148 62311547 -140773985 - MER20B DNA MER1_type -270 513 59 318 260 72 72 chr5 62311994 62312217 -140773315 + MLT1K LTR MaLR 226 448 -140 6352 128 3 6 chr5 62312219 62313678 -140771854 - L1PB1 LINE L1 -3 6148 4690 4805 192 9 9 chr5 62313921 62314969 -140770563 + L1 LINE L1 3647 4693 -1453 1260 175 58 3 chr5 62315093 62315384 -140770148 + MER33 DNA MER1_type 14 320 -4 585 28 0 0 chr5 62315834 62315905 -140769627 + (GA)n Simple_repeat Simple_repeat 2 72 0 262 219 102 124 chr5 62316542 62316679 -140768853 + MIR SINE MIR 71 204 -58 211 362 51 43 chr5 62318547 62318685 -140766847 + L2 LINE L2 3173 3311 -2 234 174 0 0 chr5 62318714 62318760 -140766772 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 296 26 0 0 chr5 62318761 62318799 -140766733 + L1PA4 LINE L1 5747 5784 -371 * 13988 25 0 0 chr5 62318797 62320535 -140764997 - L1PA3 LINE L1 -1389 4757 3020 7622 27 1 0 chr5 62320535 62321939 -140763593 + L1PA3 LINE L1 4746 6151 -4 3094 36 0 0 chr5 62321943 62322328 -140763204 + L1PA4 LINE L1 5770 6154 -1 317 82 20 0 chr5 62322332 62322381 -140763151 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 1116 238 98 55 chr5 62323186 62323623 -140761909 - MLT1C LTR MaLR -1 466 11 281 256 152 18 chr5 62323646 62323810 -140761722 - MLT1H LTR MaLR -363 186 1 459 269 15 15 chr5 62323883 62324017 -140761515 + MIR SINE MIR 128 261 -1 1785 44 40 0 chr5 62325163 62325389 -140760143 - L1PA3 LINE L1 -3 6152 5918 1349 145 40 0 chr5 62325389 62325654 -140759878 + L1PA10 LINE L1 5908 6181 0 1831 167 3 0 chr5 62325744 62326026 -140759506 + AluJo SINE Alu 6 288 -24 228 163 0 0 chr5 62326252 62326295 -140759237 + (TG)n Simple_repeat Simple_repeat 2 44 0 429 234 43 87 chr5 62326440 62326671 -140758861 + MLT1L LTR MaLR 1 221 -394 452 301 94 49 chr5 62327688 62327859 -140757673 - Charlie8 DNA MER1_type -60 281 92 2122 128 0 10 chr5 62327859 62328157 -140757375 + AluSx SINE Alu 1 295 -17 452 301 94 49 chr5 62328157 62328251 -140757281 - Charlie8 DNA MER1_type -249 92 4 2105 127 7 0 chr5 62328668 62328960 -140756572 - AluSp SINE Alu -19 294 1 5773 184 28 17 chr5 62329588 62331915 -140753617 - L1MC1 LINE L1 -17 6596 4242 2256 96 6 19 chr5 62331915 62332229 -140753303 - AluSg SINE Alu 0 310 1 5773 184 28 17 chr5 62332229 62332290 -140753242 - L1MC1 LINE L1 -2371 4242 4183 602 152 11 0 chr5 62332321 62332413 -140753119 - FLAM_C SINE Alu -18 125 33 263 237 61 0 chr5 62332413 62332527 -140753005 - L1MC1 LINE L1 -2230 4196 4076 4484 221 29 52 chr5 62332542 62334593 -140750939 - L1MC1 LINE L1 -2294 4132 2131 1793 224 41 5 chr5 62334747 62335189 -140750343 + MLT1C LTR MaLR 10 467 0 193 269 110 71 chr5 62335678 62335860 -140749672 - L3b LINE CR1 -26 1557 1369 23 68 0 0 chr5 62335909 62335953 -140749579 + AT_rich Low_complexity Low_complexity 1 44 0 745 234 6 0 chr5 62335967 62336138 -140749394 - L1MD2 LINE L1 -16 6343 6172 3453 171 21 87 chr5 62336364 62337222 -140748310 - MER21A LTR ERV1 -20 911 111 796 141 11 89 chr5 62337213 62337404 -140748128 - MER21A LTR ERV1 -755 176 1 * 806 196 119 5 chr5 62337500 62337884 -140747648 + MER74A LTR ERVL 1 558 0 320 266 28 18 chr5 62338166 62338275 -140747257 - L1ME LINE L1 -303 5818 5709 180 0 0 0 chr5 62338385 62338405 -140747127 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1697 146 38 55 chr5 62338496 62338839 -140746693 + MER44D DNA MER2_type 2 608 -1 304 115 0 16 chr5 62339005 62339066 -140746466 + L1MA2 LINE L1 6245 6304 0 260 338 14 14 chr5 62339148 62339222 -140746310 + MER5A DNA MER1_type 81 154 -35 1765 169 0 3 chr5 62339222 62339526 -140746006 - AluJo SINE Alu 0 303 1 276 254 75 0 chr5 62339552 62339619 -140745913 - MIR3 SINE MIR -52 156 85 5959 135 29 21 chr5 62340693 62341931 -140743601 - L1MA5A LINE L1 -3 6294 5047 2270 118 0 0 chr5 62341931 62342235 -140743297 - AluSq SINE Alu -9 304 1 5959 135 29 21 chr5 62342235 62342728 -140742804 - L1MA5A LINE L1 -1250 5047 4559 1684 169 7 42 chr5 62342738 62343045 -140742487 - AluJo SINE Alu -16 296 1 377 306 10 0 chr5 62344266 62344364 -140741168 - L2 LINE L2 -33 3239 3141 221 222 0 0 chr5 62344364 62344409 -140741123 + GA-rich Low_complexity Low_complexity 2 46 0 793 257 159 19 chr5 62344552 62344980 -140740552 - LTR33 LTR ERVL -31 490 3 306 294 253 0 chr5 62345411 62345632 -140739900 - L1MC/D LINE L1 -1989 5819 5543 21 110 0 0 chr5 62345800 62345891 -140739641 + AT_rich Low_complexity Low_complexity 1 91 0 396 259 44 87 chr5 62346339 62346660 -140738872 - MLT1K LTR MaLR -2 586 280 2051 192 53 84 chr5 62347746 62348392 -140737140 - MLT1E2 LTR MaLR 0 626 1 345 125 0 0 chr5 62348554 62348610 -140736922 + (TG)n Simple_repeat Simple_repeat 1 56 0 299 103 0 17 chr5 62348609 62348667 -140736865 + (GA)n Simple_repeat Simple_repeat 1 57 0 * 2078 170 37 8 chr5 62348839 62349216 -140736316 + MLT1B LTR MaLR 1 388 -2 238 319 142 35 chr5 62349641 62349754 -140735778 + MIR3 SINE MIR 32 156 -52 192 333 27 13 chr5 62351347 62351422 -140734110 - L2 LINE L2 -206 3066 2991 495 204 92 35 chr5 62351467 62351609 -140733923 - MIR SINE MIR -31 231 82 232 359 147 22 chr5 62351746 62352462 -140733070 - L2 LINE L2 -468 2846 2042 907 160 17 0 chr5 62353499 62353680 -140731852 - MER53 DNA DNA -2 187 4 3838 169 7 18 chr5 62353900 62354640 -140730892 - L1MB3 LINE L1 -1 6182 5451 1954 118 14 20 chr5 62354653 62354950 -140730582 - AluSc SINE Alu -14 295 1 335 320 46 30 chr5 62355074 62355271 -140730261 - MARNA DNA Mariner -342 244 45 2116 108 3 7 chr5 62356794 62357081 -140728451 - AluSx SINE Alu -18 294 9 229 35 0 0 chr5 62357723 62357752 -140727780 - LTR65 LTR ERV1 -439 230 202 280 270 100 50 chr5 62358050 62358150 -140727382 + L2 LINE L2 3168 3272 0 345 325 88 8 chr5 62359065 62359414 -140726118 + L1MC4a LINE L1 5540 5818 -303 486 338 31 15 chr5 62360603 62360814 -140724718 + MIR SINE MIR 37 248 -14 2083 97 10 20 chr5 62361043 62361341 -140724191 + AluSg SINE Alu 5 299 -11 275 339 70 0 chr5 62361651 62361766 -140723766 - L2 LINE L2 0 3313 3191 342 354 92 5 chr5 62361835 62362041 -140723491 - L2 LINE L2 -214 3058 2835 2801 84 0 11 chr5 62368119 62368478 -140717054 + THE1B LTR MaLR 1 355 -9 997 243 60 7 chr5 62368788 62369072 -140716460 - LTR16C LTR ERVL -57 434 136 561 270 122 41 chr5 62369320 62369516 -140716016 + MIR SINE MIR 4 215 -47 247 265 59 150 chr5 62369527 62369580 -140715952 - L2 LINE L2 -60 3212 3156 1921 146 7 0 chr5 62369580 62369868 -140715664 - AluSp SINE Alu -22 291 2 247 265 59 150 chr5 62369868 62370101 -140715431 - L2 LINE L2 -116 3156 2952 3729 65 38 8 chr5 62370140 62370613 -140714919 - L1PA10 LINE L1 -5 6163 5677 331 279 39 32 chr5 62370717 62370871 -140714661 + MIR3 SINE MIR 7 161 -47 803 169 0 40 chr5 62371403 62371551 -140713981 - FLAM_C SINE Alu 0 143 2 1759 233 38 69 chr5 62371855 62372379 -140713153 - MLT1J LTR MaLR -2 509 2 299 234 35 99 chr5 62372403 62372544 -140712988 + MIR SINE MIR 80 211 -51 280 354 50 50 chr5 62374029 62374269 -140711263 - L3b LINE CR1 -9 1574 1335 263 270 82 54 chr5 62375220 62375375 -140710157 - MIR SINE MIR -67 141 25 326 324 179 26 chr5 62375817 62376403 -140709129 + L2 LINE L2 1770 2445 -869 522 261 133 11 chr5 62377539 62377719 -140707813 - MER115 DNA AcHobo -2 691 490 666 313 73 0 chr5 62377820 62378012 -140707520 - MER115 DNA AcHobo -336 357 152 208 305 149 28 chr5 62379876 62380017 -140705515 + MIR SINE MIR 99 256 -6 1122 237 49 97 chr5 62380023 62380558 -140704974 + MLT1J LTR MaLR 1 509 -2 381 264 40 16 chr5 62380568 62380693 -140704839 - MIR SINE MIR -57 205 78 1057 249 44 4 chr5 62380797 62381046 -140704486 + MIR SINE MIR 2 260 -2 2253 102 3 0 chr5 62381772 62382065 -140703467 - AluSp SINE Alu -19 294 1 369 43 0 0 chr5 62383253 62383300 -140702232 + (TG)n Simple_repeat Simple_repeat 2 48 0 1428 231 169 3 chr5 62383593 62383983 -140701549 - MLT1G1 LTR MaLR 0 595 141 192 40 0 0 chr5 62384397 62384422 -140701110 + (TTTTTG)n Simple_repeat Simple_repeat 1 25 0 2244 109 10 0 chr5 62385338 62385642 -140699890 - AluSx SINE Alu -5 307 1 872 154 0 0 chr5 62385775 62385911 -140699621 - MER20 DNA MER1_type -1 218 83 234 343 0 0 chr5 62387513 62387586 -140697946 - MIR SINE MIR -73 189 117 353 269 51 86 chr5 62387613 62387788 -140697744 - MIR SINE MIR -18 244 76 219 277 0 0 chr5 62388027 62388091 -140697441 + MIR SINE MIR 101 163 -61 210 71 0 0 chr5 62388437 62388465 -140697067 + (TA)n Simple_repeat Simple_repeat 2 29 0 2311 75 0 0 chr5 62388477 62388792 -140696740 + AluY SINE Alu 1 315 0 326 228 218 0 chr5 62389146 62389247 -140696285 - L2 LINE L2 0 3313 3191 260 345 82 15 chr5 62390214 62390414 -140695118 + MIR3 SINE MIR 7 216 -46 27 0 0 0 chr5 62390493 62390520 -140695012 + AT_rich Low_complexity Low_complexity 1 27 0 4191 139 12 56 chr5 62390520 62390722 -140694810 - L1MA4 LINE L1 -9 6291 6082 2211 109 3 0 chr5 62390722 62391016 -140694516 - AluSp SINE Alu -18 295 1 4191 139 12 56 chr5 62391016 62391587 -140693945 - L1MA4 LINE L1 -218 6082 5552 200 367 39 6 chr5 62391689 62391869 -140693663 - L2 LINE L2 -569 2745 2560 307 308 43 48 chr5 62393590 62393798 -140691734 - MIR SINE MIR -9 253 47 181 341 57 23 chr5 62393879 62393967 -140691565 + MIR SINE MIR 63 153 -109 362 83 0 0 chr5 62394454 62394502 -140691030 + MADE1 DNA Mariner 1 48 -32 480 259 107 58 chr5 62394531 62394755 -140690777 - MIR SINE MIR -22 240 6 2205 105 0 3 chr5 62395285 62395605 -140689927 - AluSx SINE Alu 0 319 1 207 0 0 0 chr5 62396249 62396272 -140689260 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 412 310 81 17 chr5 62396470 62396644 -140688888 - MIR SINE MIR -58 204 20 205 182 0 0 chr5 62397648 62397681 -140687851 + polypurine Low_complexity Low_complexity 2 34 0 487 206 22 0 chr5 62398597 62398689 -140686843 - MER115 DNA AcHobo -2 691 598 207 0 0 0 chr5 62399096 62399119 -140686413 + (T)n Simple_repeat Simple_repeat 1 23 0 242 225 34 11 chr5 62399616 62399705 -140685827 + (TA)n Simple_repeat Simple_repeat 1 91 0 29 60 0 0 chr5 62399723 62399773 -140685759 + AT_rich Low_complexity Low_complexity 1 50 0 409 376 0 0 chr5 62399800 62399970 -140685562 - MIR SINE MIR -65 197 28 2269 193 63 17 chr5 62400098 62400576 -140684956 + MLT1D LTR MaLR 3 502 -3 1860 134 3 17 chr5 62400615 62400907 -140684625 + L1PA13 LINE L1 5872 6159 -4 21 36 0 0 chr5 62400925 62400953 -140684579 + AT_rich Low_complexity Low_complexity 1 28 0 7829 39 0 0 chr5 62401022 62402404 -140683128 - L1PA4 LINE L1 0 6155 4771 299 154 51 77 chr5 62403579 62403657 -140681875 + L1MA9 LINE L1 6234 6309 -3 739 144 85 0 chr5 62405985 62406103 -140679429 + FLAM_C SINE Alu 1 128 -5 21 0 0 0 chr5 62406279 62406300 -140679232 + AT_rich Low_complexity Low_complexity 1 21 0 748 362 47 0 chr5 62406750 62407137 -140678395 - MERVL LTR ERVL -471 5293 4889 998 203 28 6 chr5 62407154 62407336 -140678196 + MER58A DNA MER1_type 39 224 0 864 323 89 18 chr5 62407337 62408189 -140677343 - MERVL LTR ERVL -633 4852 3925 426 267 92 8 chr5 62408468 62408599 -140676933 + MERVL LTR ERVL 1887 2028 -3457 585 311 77 70 chr5 62408607 62408818 -140676714 - MERVL LTR ERVL -2122 3532 3324 2140 123 13 0 chr5 62408818 62409120 -140676412 - AluSg SINE Alu -4 306 1 585 311 77 70 chr5 62409120 62409191 -140676341 - MERVL LTR ERVL -2330 3324 3255 3555 121 31 21 chr5 62409191 62409713 -140675819 - MER1A DNA MER1_type 0 527 1 585 311 77 70 chr5 62409713 62409870 -140675662 - MERVL LTR ERVL -2399 3255 3089 275 277 26 78 chr5 62410237 62410414 -140675118 - MERVL LTR ERVL -2977 2508 2372 950 276 115 30 chr5 62410426 62410853 -140674679 + LTR33 LTR ERVL 57 519 -2 364 284 0 10 chr5 62411538 62411640 -140673892 - LTR67 LTR ERVL 0 557 457 884 194 22 19 chr5 62412155 62412189 -140673343 + L1MA4 LINE L1 5877 5909 -388 1159 155 5 15 chr5 62412189 62412395 -140673137 - L1MA4 LINE L1 -1 6299 6096 884 194 22 19 chr5 62412395 62412573 -140672959 + L1MA4 LINE L1 5909 6085 -212 27947 23 0 1 chr5 62412680 62416722 -140668810 - L1PA2 LINE L1 0 6155 2144 1116 43 0 0 chr5 62416714 62416853 -140668679 + L1P LINE L1 2041 2179 -3967 * 340 85 0 0 chr5 62417247 62417294 -140668238 + MADE1 DNA Mariner 34 80 0 295 260 0 14 chr5 62418252 62418325 -140667207 + CT-rich Low_complexity Low_complexity 2 73 0 1898 128 36 23 chr5 62418446 62418752 -140666780 + L1PA16 LINE L1 5856 6165 -1 226 224 61 0 chr5 62418858 62418907 -140666625 + LTR32 LTR ERVL 317 368 -103 417 205 0 13 chr5 62418907 62418985 -140666547 + LTR32 LTR ERVL 317 393 -78 202 231 39 0 chr5 62419077 62419129 -140666403 + GA-rich Low_complexity Low_complexity 1 54 0 192 327 84 65 chr5 62420284 62420391 -140665141 + MER5A DNA MER1_type 65 173 -16 184 261 22 0 chr5 62424605 62424651 -140660881 - MIR SINE MIR -2 260 214 314 316 149 0 chr5 62426483 62426597 -140658935 - L2 LINE L2 -1 3271 3141 596 279 69 39 chr5 62428498 62428719 -140656813 - MIR SINE MIR -15 247 24 216 97 0 0 chr5 62430054 62430085 -140655447 + (T)n Simple_repeat Simple_repeat 1 31 0 422 271 128 54 chr5 62430725 62430928 -140654604 + Charlie8 DNA MER1_type 57 274 -2143 3259 118 43 16 chr5 62431181 62431773 -140653759 - MER4B LTR ERV1 0 779 6 286 314 80 73 chr5 62432651 62432925 -140652607 + L2 LINE L2 2700 2975 -339 230 0 0 32 chr5 62433387 62433418 -140652114 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1871 149 3 3 chr5 62433418 62433700 -140651832 - AluSx SINE Alu -30 282 1 499 286 103 9 chr5 62434012 62434225 -140651307 + MIR SINE MIR 8 240 -22 383 302 65 29 chr5 62435345 62435484 -140650048 + MIR3 SINE MIR 3 146 -62 706 251 97 43 chr5 62435490 62435840 -140649692 + HAL1 LINE L1 1 369 -2138 1309 218 19 22 chr5 62435899 62436215 -140649317 - MLT1H LTR MaLR -228 321 7 3531 251 93 35 chr5 62436860 62438242 -140647290 + HAL1 LINE L1 535 1996 -511 2418 69 0 31 chr5 62438279 62438596 -140646936 + AluY SINE Alu 1 307 -4 224 258 0 16 chr5 62439095 62439157 -140646375 - MIR SINE MIR -46 216 156 371 21 21 0 chr5 62439370 62439418 -140646114 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 209 376 0 11 chr5 62439747 62439840 -140645692 + MIR SINE MIR 103 194 -68 1301 147 27 49 chr5 62440955 62441179 -140644353 - MER20 DNA MER1_type 0 219 1 1969 127 0 0 chr5 62441274 62441542 -140643990 - AluSx SINE Alu -4 308 41 25 31 0 0 chr5 62441545 62441577 -140643955 + AT_rich Low_complexity Low_complexity 1 32 0 593 241 196 0 chr5 62443524 62443682 -140641850 - MER91A DNA MER1_type 0 196 8 442 283 40 29 chr5 62444353 62444526 -140641006 + MER5B DNA MER1_type 4 178 0 478 141 0 13 chr5 62445058 62445136 -140640396 - MER116 DNA Mariner 0 80 4 371 305 8 0 chr5 62447527 62447658 -140637874 - L2 LINE L2 -1277 2037 1906 227 93 23 0 chr5 62447663 62447706 -140637826 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 195 100 0 0 chr5 62447706 62447736 -140637796 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 285 317 77 0 chr5 62448273 62448377 -140637155 + MIR SINE MIR 117 228 -34 194 200 73 0 chr5 62448427 62448482 -140637050 - MIR SINE MIR -112 96 38 336 275 21 56 chr5 62449696 62449838 -140635694 + MIR SINE MIR 1 137 -71 2853 167 47 6 chr5 62449987 62450454 -140635078 + MER66B LTR ERV1 1 486 0 205 308 39 13 chr5 62450818 62450896 -140634636 + MIR SINE MIR 106 185 -77 258 176 0 0 chr5 62451954 62452005 -140633527 + CT-rich Low_complexity Low_complexity 3 53 0 575 260 140 10 chr5 62452904 62453104 -140632428 + MIR SINE MIR 1 226 -36 401 314 31 6 chr5 62453533 62453692 -140631840 - MIR SINE MIR -31 231 69 975 246 59 53 chr5 62454983 62455026 -140630506 - MLT2B1 LTR ERVL 0 520 479 234 0 0 0 chr5 62455026 62455052 -140630480 + (TG)n Simple_repeat Simple_repeat 1 26 0 975 246 59 53 chr5 62455052 62455366 -140630166 - MLT2B1 LTR ERVL -41 479 161 1257 212 12 59 chr5 62455368 62455708 -140629824 - MLT1D LTR MaLR -181 324 1 206 276 52 0 chr5 62456841 62456899 -140628633 - L3 LINE CR1 -304 1273 1213 180 237 26 0 chr5 62456928 62456966 -140628566 - L2 LINE L2 -9 3263 3225 291 364 27 0 chr5 62457072 62457182 -140628350 - L2 LINE L2 -219 3053 2941 1253 226 195 8 chr5 62457387 62457772 -140627760 - LTR16B LTR ERVL 0 464 8 252 330 113 59 chr5 62457932 62458243 -140627289 - L2 LINE L2 -459 2855 2506 886 161 8 0 chr5 62458243 62458373 -140627159 + FLAM_C SINE Alu 1 131 -2 252 330 113 59 chr5 62458373 62458555 -140626977 - L2 LINE L2 -808 2506 2335 1277 323 145 22 chr5 62458568 62459148 -140626384 - L3 LINE CR1 -393 1184 677 8824 99 53 26 chr5 62459148 62460449 -140625083 - SVA Other Other 0 1386 51 192 40 0 0 chr5 62460452 62460477 -140625055 + (GGGAGA)n Simple_repeat Simple_repeat 1 25 0 1277 323 145 22 chr5 62460477 62460878 -140624654 - L3 LINE CR1 -901 676 78 530 270 110 15 chr5 62460917 62461117 -140624415 + MIR SINE MIR 44 262 0 2731 50 3 0 chr5 62461273 62461596 -140623936 - LTR17 LTR ERV1 -456 324 1 13562 47 6 0 chr5 62461596 62463311 -140622221 - HERV17 LTR ERV1 0 8626 6902 6548 54 7 1 chr5 62463302 62464140 -140621392 - HERV17 LTR ERV1 -3559 5067 4225 * 359 264 22 0 chr5 62464396 62464487 -140621045 + MIR3 SINE MIR 116 208 0 1345 221 63 27 chr5 62464946 62465358 -140620174 - MER31B LTR ERV1 -39 427 1 26 0 0 0 chr5 62466285 62466311 -140619221 + AT_rich Low_complexity Low_complexity 1 26 0 216 253 20 20 chr5 62467488 62467523 -140618009 + (TA)n Simple_repeat Simple_repeat 1 35 -64 2281 181 19 9 chr5 62467523 62467944 -140617588 + MSTB LTR MaLR 2 426 0 216 253 20 20 chr5 62467944 62468007 -140617525 + (TA)n Simple_repeat Simple_repeat 34 99 0 219 88 0 0 chr5 62469271 62469305 -140616227 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 265 316 13 13 chr5 62469316 62469395 -140616137 - MIR SINE MIR -111 97 19 341 263 34 93 chr5 62469670 62469906 -140615626 + L2 LINE L2 3026 3247 -66 1622 43 38 5 chr5 62472246 62472456 -140613076 + L1PA6 LINE L1 5932 6148 -6 279 0 0 0 chr5 62472508 62472539 -140612993 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 231 61 0 0 chr5 62473946 62473979 -140611553 + (TG)n Simple_repeat Simple_repeat 1 33 0 448 264 6 18 chr5 62474744 62474763 -140610769 - L1MA10 LINE L1 0 6334 6316 909 231 17 23 chr5 62474763 62475036 -140610496 - L1ME2 LINE L1 -9 6155 5886 1800 228 33 74 chr5 62475135 62475796 -140609736 - L1ME2 LINE L1 -269 5895 5262 5090 241 90 17 chr5 62475801 62477851 -140607681 - L1ME2 LINE L1 -1034 5112 2912 3230 67 5 9 chr5 62477851 62478286 -140607246 - MLT2A2 LTR ERVL 0 453 21 892 229 15 35 chr5 62478292 62478633 -140606899 - L1ME2 LINE L1 -3249 2897 2564 393 290 87 22 chr5 62478692 62478875 -140606657 - MLT1J LTR MaLR -316 195 1 236 128 0 21 chr5 62480273 62480320 -140605212 + (GGAA)n Simple_repeat Simple_repeat 2 47 0 184 100 50 0 chr5 62481629 62481669 -140603863 + CT-rich Low_complexity Low_complexity 2 43 0 1285 142 18 0 chr5 62481677 62481895 -140603637 + MSTA LTR MaLR 207 428 0 376 309 95 12 chr5 62481895 62482063 -140603469 + MIR SINE MIR 81 262 0 385 160 0 21 chr5 62483053 62483147 -140602385 + (TCCA)n Simple_repeat Simple_repeat 2 93 0 2346 93 7 0 chr5 62483428 62483730 -140601802 - AluSx SINE Alu -8 304 1 1840 158 65 0 chr5 62483877 62484199 -140601333 - MER2 DNA MER2_type 0 344 2 204 365 10 21 chr5 62484406 62484502 -140601030 + L2 LINE L2 2712 2806 -508 193 352 131 14 chr5 62484569 62484714 -140600818 + L2 LINE L2 2920 3081 -191 376 240 8 76 chr5 62484763 62484919 -140600613 + MER5A DNA MER1_type 4 160 -28 22405 132 55 19 chr5 62484940 62487885 -140597647 - L1PA8A LINE L1 -5 6441 3602 3497 198 23 81 chr5 62487885 62488913 -140596619 + LTR5 LTR ERVK 1 969 0 22405 132 55 19 chr5 62488913 62492115 -140593417 - L1PA8A LINE L1 -2844 3602 1 672 218 154 0 chr5 62492161 62492317 -140593215 + MER5A DNA MER1_type 10 189 0 315 176 0 59 chr5 62492449 62492534 -140592998 + MER116 DNA Mariner 1 80 0 217 307 27 40 chr5 62492534 62492609 -140592923 - MIR SINE MIR -183 79 6 192 111 0 0 chr5 62494372 62494408 -140591124 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2403 159 37 20 chr5 62494893 62495352 -140590180 + MLT1C LTR MaLR 1 467 0 272 321 107 0 chr5 62496155 62496267 -140589265 - LTR33A LTR ERVL -273 250 127 262 0 0 0 chr5 62496273 62496303 -140589229 + MLT1B LTR MaLR 361 390 0 1736 167 88 107 chr5 62496496 62496842 -140588690 - MLT1D LTR MaLR -1 504 170 1016 79 0 0 chr5 62496842 62496982 -140588550 - L1PA6 LINE L1 -3 6151 6012 1736 167 88 107 chr5 62496982 62497149 -140588383 - MLT1D LTR MaLR -335 170 1 1647 179 58 3 chr5 62497281 62497572 -140587960 - AluJb SINE Alu -5 307 1 384 22 0 0 chr5 62497886 62497931 -140587601 + (TG)n Simple_repeat Simple_repeat 2 46 0 2140 108 164 13 chr5 62498631 62499003 -140586529 + MSTA LTR MaLR 1 428 0 414 0 0 0 chr5 62499440 62499486 -140586046 + (TG)n Simple_repeat Simple_repeat 1 46 0 201 39 0 0 chr5 62499491 62499517 -140586015 + (GA)n Simple_repeat Simple_repeat 1 26 0 920 93 19 25 chr5 62500423 62500584 -140584948 - L1MB2 LINE L1 0 6171 6012 2086 192 61 11 chr5 62500586 62501327 -140584205 - L1M4 LINE L1 -455 5719 4936 350 308 39 103 chr5 62501865 62502255 -140583277 + HAL1 LINE L1 833 1197 -1310 * 363 330 108 11 chr5 62502243 62502428 -140583104 + HAL1 LINE L1 1560 1762 -745 2429 319 122 32 chr5 62502439 62504058 -140581474 + L2 LINE L2 331 2094 -1220 284 250 0 23 chr5 62504083 62504171 -140581361 + ERVL LTR ERVL 4474 4559 -1205 1167 321 26 51 chr5 62504229 62505124 -140580408 - ERVL LTR ERVL -338 5426 4555 503 315 161 20 chr5 62505297 62505589 -140579943 + L2 LINE L2 2980 3312 -1 998 225 9 4 chr5 62505683 62505910 -140579622 + MSTB1 LTR MaLR 205 432 0 2489 256 99 45 chr5 62506121 62507423 -140578109 + HAL1 LINE L1 3 1375 -1132 503 295 105 48 chr5 62507666 62508171 -140577361 + L1ME LINE L1 5269 5802 -319 638 289 42 31 chr5 62509000 62509287 -140576245 + LTR33 LTR ERVL 1 290 -231 558 280 28 11 chr5 62509397 62509577 -140575955 + MIR SINE MIR 54 235 -27 674 297 135 27 chr5 62510053 62510423 -140575109 + MLT1J LTR MaLR 4 413 -98 21 0 0 0 chr5 62511503 62511524 -140574008 + AT_rich Low_complexity Low_complexity 1 21 0 2553 52 3 0 chr5 62511903 62512211 -140573321 + AluY SINE Alu 1 309 -2 641 268 121 5 chr5 62512219 62512443 -140573089 + MIR SINE MIR 8 257 -5 296 255 96 0 chr5 62513138 62513232 -140572300 + MIR SINE MIR 110 212 -50 1785 131 16 6 chr5 62514082 62514402 -140571130 - L1MA8 LINE L1 -53 6238 5916 826 207 18 0 chr5 62515524 62515693 -140569839 - MIR SINE MIR -1 261 90 21 36 0 0 chr5 62516397 62516425 -140569107 + AT_rich Low_complexity Low_complexity 1 28 0 321 285 127 55 chr5 62516731 62516896 -140568636 - MIR SINE MIR -66 196 20 573 286 102 45 chr5 62517139 62517160 -140568372 - LTR16A LTR ERVL -10 440 422 1688 155 188 6 chr5 62517160 62517522 -140568010 + MSTA LTR MaLR 1 428 0 573 286 102 45 chr5 62517522 62517902 -140567630 - LTR16A LTR ERVL -28 422 16 504 199 50 8 chr5 62518120 62518260 -140567272 - L1MD3 LINE L1 -3 8036 7883 371 298 91 8 chr5 62518337 62518458 -140567074 + MIR SINE MIR 19 149 -113 210 352 117 16 chr5 62518536 62518664 -140566868 + L2 LINE L2 3122 3262 -10 4418 145 20 25 chr5 62520875 62521704 -140563828 - L1PA16 LINE L1 -17 6149 5325 22 0 0 0 chr5 62521731 62521753 -140563779 + AT_rich Low_complexity Low_complexity 1 22 0 282 333 80 56 chr5 62521765 62521927 -140563605 - L2 LINE L2 -5 3267 3102 2050 172 79 55 chr5 62522010 62522503 -140563029 - MLT1D LTR MaLR 0 505 1 581 301 91 60 chr5 62523347 62523929 -140561603 + MLT1L LTR MaLR 8 607 -8 1150 205 63 10 chr5 62524350 62524652 -140560880 - MER33 DNA MER1_type -6 318 1 24 0 0 0 chr5 62524854 62524878 -140560654 + AT_rich Low_complexity Low_complexity 1 24 0 821 337 102 38 chr5 62524964 62525776 -140559756 + L2 LINE L2 1876 2739 -575 1147 124 57 10 chr5 62525794 62525987 -140559545 - L1PA10 LINE L1 -11 6157 5956 202 233 23 47 chr5 62526057 62526143 -140559389 + L2 LINE L2 2912 2995 -277 1405 176 53 23 chr5 62526150 62526547 -140558985 - Charlie1 DNA MER1_type -1 2760 2352 1021 186 57 111 chr5 62526547 62526933 -140558599 - MLT1B LTR MaLR -2 388 24 243 292 45 22 chr5 62527017 62527106 -140558426 + L2 LINE L2 2999 3089 -183 25 0 0 0 chr5 62527296 62527321 -140558211 + AT_rich Low_complexity Low_complexity 1 25 0 1762 112 29 49 chr5 62528537 62528885 -140556647 + THE1C LTR MaLR 1 425 -32 7451 39 0 0 chr5 62528992 62530100 -140555432 + L1PA5 LINE L1 5042 6149 -5 526 253 57 13 chr5 62530326 62530484 -140555048 - MIR SINE MIR -76 186 22 211 307 180 7 chr5 62530886 62531036 -140554496 - MIR SINE MIR -2 260 85 281 44 67 0 chr5 62531794 62531839 -140553693 + T-rich Low_complexity Low_complexity 1 48 0 349 267 79 10 chr5 62532228 62532329 -140553203 - MIR3 SINE MIR -6 202 95 195 268 27 20 chr5 62532437 62532545 -140552987 - MER5A DNA MER1_type 0 178 43 186 68 0 68 chr5 62533009 62533053 -140552479 + (GGAGA)n Simple_repeat Simple_repeat 3 43 0 323 118 0 0 chr5 62533483 62533534 -140551998 - MER53 DNA DNA -138 51 1 500 295 40 12 chr5 62533699 62533872 -140551660 - MER5B DNA MER1_type 0 178 1 1274 231 25 42 chr5 62534147 62534549 -140550983 - MLT2C1 LTR ERVL -2 395 1 1692 145 7 0 chr5 62535188 62535478 -140550054 + L1MA4 LINE L1 5998 6289 -11 208 282 82 12 chr5 62535557 62535642 -140549890 + MIR3 SINE MIR 112 202 -6 267 217 0 17 chr5 62535829 62535889 -140549643 + MER94 DNA DNA 18 76 -58 2099 70 3 11 chr5 62535890 62536176 -140549356 + L1PA8 LINE L1 5889 6172 0 204 314 47 0 chr5 62536437 62536523 -140549009 - L2 LINE L2 -650 2664 2575 826 205 78 0 chr5 62537862 62538028 -140547504 - AluJb SINE Alu -3 309 131 1864 162 102 52 chr5 62538386 62538867 -140546665 - MLT1D LTR MaLR 0 505 1 2381 57 0 3 chr5 62538894 62539195 -140546337 + AluY SINE Alu 1 300 -11 381 327 6 19 chr5 62539936 62540092 -140545440 + CT-rich Low_complexity Low_complexity 1 154 0 939 235 35 0 chr5 62540911 62541111 -140544421 + MIR SINE MIR 23 229 -33 327 315 83 33 chr5 62541264 62541445 -140544087 - L1ME1 LINE L1 -253 5913 5724 269 307 53 9 chr5 62541474 62541588 -140543944 - L1ME1 LINE L1 -523 5639 5521 21 0 0 0 chr5 62541651 62541672 -140543860 + AT_rich Low_complexity Low_complexity 1 21 0 2295 101 0 0 chr5 62542756 62543052 -140542480 + AluSx SINE Alu 1 296 -16 294 225 0 0 chr5 62543381 62543461 -140542071 + GA-rich Low_complexity Low_complexity 3 82 0 250 258 90 11 chr5 62544361 62544450 -140541082 - MLT1H LTR MaLR -362 187 92 213 39 0 0 chr5 62544686 62544712 -140540820 + (TA)n Simple_repeat Simple_repeat 2 27 0 226 272 12 25 chr5 62544806 62544887 -140540645 + GA-rich Low_complexity Low_complexity 1 80 0 525 320 112 61 chr5 62545538 62545805 -140539727 - L2 LINE L2 -3 3269 3017 2501 74 0 0 chr5 62545805 62546115 -140539417 + AluY SINE Alu 1 310 -1 525 320 112 61 chr5 62546115 62546617 -140538915 - L2 LINE L2 -255 3017 2458 276 321 98 31 chr5 62547363 62547556 -140537976 + L3 LINE CR1 1371 1576 -1 679 206 40 65 chr5 62549071 62549270 -140536262 + MLT1A1 LTR MaLR 1 194 -171 4881 208 55 43 chr5 62549311 62551306 -140534226 + L1ME3 LINE L1 627 2782 -3644 295 208 31 10 chr5 62551299 62551395 -140534137 + L1ME3 LINE L1 4578 4675 -1751 * 2431 78 3 10 chr5 62551490 62551798 -140533734 - AluSp SINE Alu -7 306 1 195 313 109 8 chr5 62551942 62552070 -140533462 + L3b LINE CR1 1135 1275 -308 21 0 0 0 chr5 62553067 62553088 -140532444 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr5 62553317 62553344 -140532188 + (GA)n Simple_repeat Simple_repeat 1 27 0 300 330 48 8 chr5 62553587 62553731 -140531801 - MIR SINE MIR -43 165 15 226 206 23 38 chr5 62554512 62554643 -140530889 + GA-rich Low_complexity Low_complexity 3 131 0 503 277 102 28 chr5 62555519 62555696 -140529836 + MIR3 SINE MIR 16 205 -3 22 35 0 0 chr5 62558635 62558664 -140526868 + AT_rich Low_complexity Low_complexity 1 29 0 944 192 146 24 chr5 62559820 62560145 -140525387 + MLT1G3 LTR MaLR 160 562 0 405 391 81 16 chr5 62560596 62560918 -140524614 - L2 LINE L2 -12 3260 2918 203 210 16 16 chr5 62561048 62561110 -140524422 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 555 318 62 32 chr5 62561180 62562144 -140523388 + L1ME3 LINE L1 5166 6161 -281 713 132 0 0 chr5 62565455 62565569 -140519963 - L1PB1 LINE L1 0 6151 6038 290 321 55 9 chr5 62565625 62565734 -140519798 + MIR3 SINE MIR 67 180 -28 844 221 17 69 chr5 62565904 62566056 -140519476 + MER58A DNA MER1_type 6 143 -2277 585 168 219 0 chr5 62566056 62566211 -140519321 - MER53 DNA DNA 0 189 1 844 221 17 69 chr5 62566211 62566289 -140519243 + MER58A DNA MER1_type 143 224 0 245 296 151 66 chr5 62566293 62566445 -140519087 + MIR SINE MIR 21 185 -77 351 259 24 0 chr5 62567701 62567786 -140517746 + MIR SINE MIR 30 116 -92 382 286 137 26 chr5 62568846 62569073 -140516459 - L2 LINE L2 -954 2360 2109 896 203 5 20 chr5 62569424 62569626 -140515906 + MER20 DNA MER1_type 3 201 -18 717 342 80 24 chr5 62569660 62570113 -140515419 - L2 LINE L2 -571 2743 2266 251 264 158 12 chr5 62570164 62570308 -140515224 + MIR3 SINE MIR 5 162 -46 7461 33 4 0 chr5 62571787 62573061 -140512471 - L1PA4 LINE L1 0 6155 4921 1185 208 111 15 chr5 62573094 62573512 -140512020 + MLT1F LTR MaLR 64 540 -2 287 358 17 28 chr5 62573513 62573692 -140511840 - MLT1K LTR MaLR -100 488 312 504 284 58 73 chr5 62574404 62574470 -140511062 - MIR SINE MIR 0 262 197 413 204 111 123 chr5 62574470 62574524 -140511008 - MLT2C1 LTR ERVL -3 394 341 275 71 24 0 chr5 62574524 62574566 -140510966 + (CA)n Simple_repeat Simple_repeat 2 44 0 413 204 111 123 chr5 62574566 62574908 -140510624 - MLT2C1 LTR ERVL -56 341 3 504 284 58 73 chr5 62574908 62575102 -140510430 - MIR SINE MIR -65 197 6 409 294 164 7 chr5 62575837 62575983 -140509549 + MER5A DNA MER1_type 9 177 -12 2389 87 0 0 chr5 62576038 62576336 -140509196 - AluSg1 SINE Alu -11 298 1 193 184 0 0 chr5 62578696 62578734 -140506798 - L2 LINE L2 -3 3310 3273 374 322 0 7 chr5 62578784 62578933 -140506599 - LTR16A1 LTR ERVL -10 447 300 3075 263 59 58 chr5 62579049 62579307 -140506225 + HAL1 LINE L1 823 1079 -1428 2017 174 55 24 chr5 62579307 62579722 -140505810 + MSTA LTR MaLR 1 428 0 3075 263 59 58 chr5 62579722 62581134 -140504398 + HAL1 LINE L1 1079 2495 -12 219 269 0 30 chr5 62581583 62581650 -140503882 + CT-rich Low_complexity Low_complexity 4 68 0 21 0 0 0 chr5 62582875 62582896 -140502636 + AT_rich Low_complexity Low_complexity 1 21 0 253 246 0 0 chr5 62582917 62582974 -140502558 + MERVL LTR ERVL 1702 1758 -3265 293 339 65 21 chr5 62583115 62583668 -140501864 + MERVL LTR ERVL 3230 3800 -1964 216 232 0 54 chr5 62584091 62584147 -140501385 + polypurine Low_complexity Low_complexity 4 56 0 641 50 0 0 chr5 62584160 62584240 -140501292 + MADE1 DNA Mariner 1 80 0 281 399 63 6 chr5 62584372 62584530 -140501002 + MIR3 SINE MIR 16 182 -26 11935 197 15 26 chr5 62584701 62586563 -140498969 - L1PB4 LINE L1 0 6213 4333 1913 112 14 44 chr5 62586563 62586858 -140498674 + AluY SINE Alu 16 301 -10 11935 197 15 26 chr5 62586858 62588797 -140496735 - L1PB4 LINE L1 -1880 4333 2450 1904 153 129 8 chr5 62588797 62589177 -140496355 - MSTA LTR MaLR -2 426 1 11935 197 15 26 chr5 62589177 62589195 -140496337 - L1PB4 LINE L1 -3763 2450 2433 784 75 8 25 chr5 62589211 62589331 -140496201 - MER30 DNA MER1_type -112 118 1 2139 238 7 14 chr5 62589338 62589896 -140495636 - L1PB4 LINE L1 -3987 2216 1663 2681 91 0 13 chr5 62590061 62590445 -140495087 - L1PA13 LINE L1 -4 6159 5781 1868 100 0 0 chr5 62590514 62590784 -140494748 - L1PA13 LINE L1 -395 5768 5499 1982 220 25 38 chr5 62590787 62591684 -140493848 - L1PB4 LINE L1 -4531 1672 690 868 200 0 6 chr5 62591677 62591847 -140493685 - L1PB4 LINE L1 -5293 910 742 * 491 287 66 6 chr5 62591903 62592084 -140493448 - L1PB4 LINE L1 -5645 559 368 593 316 21 31 chr5 62592206 62592532 -140493000 - L1PB4 LINE L1 -5833 371 49 369 362 44 25 chr5 62592591 62593247 -140492285 - L1M2b LINE L1 -5257 1952 21 352 255 195 20 chr5 62595480 62595629 -140489903 - MIR3 SINE MIR -8 200 26 22 35 0 0 chr5 62596033 62596062 -140489470 + AT_rich Low_complexity Low_complexity 1 29 0 2201 104 21 0 chr5 62596296 62596632 -140488900 - L1MA2 LINE L1 0 6304 5962 15023 130 19 3 chr5 62596792 62599171 -140486361 + Tigger1 DNA MER2_type 2 2418 0 22 35 0 0 chr5 62599174 62599203 -140486329 + AT_rich Low_complexity Low_complexity 1 29 0 615 309 71 40 chr5 62599758 62600082 -140485450 + MLT1J LTR MaLR 105 438 -73 4230 99 13 20 chr5 62600145 62600780 -140484752 - L1PA12 LINE L1 -15 6153 5524 199 312 65 21 chr5 62600859 62600952 -140484580 + L2 LINE L2 2959 3055 -217 258 276 40 0 chr5 62601432 62601508 -140484024 + CT-rich Low_complexity Low_complexity 6 84 0 26 30 0 0 chr5 62601520 62601553 -140483979 + AT_rich Low_complexity Low_complexity 1 33 0 571 291 61 9 chr5 62602348 62602561 -140482971 - MIR SINE MIR 0 262 39 267 304 88 54 chr5 62602561 62602593 -140482939 - MIR SINE MIR -108 154 125 1647 216 25 11 chr5 62602593 62602959 -140482573 - MLT1A2 LTR MaLR 0 374 4 267 304 88 54 chr5 62602959 62603074 -140482458 - MIR SINE MIR -137 125 2 725 271 87 4 chr5 62603430 62603696 -140481836 - LTR33 LTR ERVL 0 521 234 228 191 0 0 chr5 62604465 62604507 -140481025 + MIR SINE MIR 218 259 -3 1636 88 0 9 chr5 62605219 62605445 -140480087 - L1PA8 LINE L1 0 6172 5949 586 270 79 60 chr5 62606782 62607270 -140478262 - MLT1H LTR MaLR 0 549 56 460 302 138 13 chr5 62607640 62607865 -140477667 + MIR SINE MIR 10 262 0 429 314 38 11 chr5 62609123 62609308 -140476224 + MER115 DNA AcHobo 10 199 -494 471 299 51 11 chr5 62610573 62610750 -140474782 + MIR SINE MIR 76 259 -3 1584 131 86 37 chr5 62611006 62611356 -140474176 - THE1C LTR MaLR -7 368 2 1412 242 55 29 chr5 62611551 62612707 -140472825 - L1M4 LINE L1 -1037 5109 3727 758 301 57 20 chr5 62615276 62615571 -140469961 + LTR16B LTR ERVL 1 306 -158 1873 166 47 25 chr5 62615571 62615932 -140469600 - THE1C LTR MaLR 0 375 7 315 277 36 36 chr5 62615939 62616105 -140469427 + LTR16B LTR ERVL 289 454 -10 570 188 346 13 chr5 62616250 62616484 -140469048 - MER5C DNA MER1_type -5 319 8 1989 143 0 7 chr5 62618886 62619224 -140466308 + AluSx SINE Alu 1 336 0 781 323 88 8 chr5 62620059 62620421 -140465111 + MLT1J2 LTR MaLR 23 413 -37 1637 247 101 44 chr5 62620498 62621090 -140464442 + MLT1E2 LTR MaLR 1 626 0 219 139 0 0 chr5 62621920 62621956 -140463576 + (TA)n Simple_repeat Simple_repeat 1 36 0 310 217 48 36 chr5 62622016 62622099 -140463433 - L2 LINE L2 -1 3271 3188 532 250 168 84 chr5 62623054 62623554 -140461978 - MLT1F LTR MaLR 0 542 1 236 399 98 24 chr5 62624486 62624895 -140460637 - L2 LINE L2 -23 3249 2811 2244 103 3 3 chr5 62625214 62625516 -140460016 + AluSx SINE Alu 1 302 -10 1788 161 46 38 chr5 62625607 62625979 -140459553 + THE1C LTR MaLR 1 375 0 1507 237 38 20 chr5 62626175 62626571 -140458961 - MLT2D LTR ERVL -6 408 6 24 0 0 0 chr5 62626616 62626640 -140458892 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 62626660 62626684 -140458848 + AT_rich Low_complexity Low_complexity 1 24 0 311 154 15 0 chr5 62626738 62626803 -140458729 + (TG)n Simple_repeat Simple_repeat 1 66 0 220 289 231 25 chr5 62627098 62627219 -140458313 + MER5A DNA MER1_type 38 183 -6 2037 116 11 0 chr5 62627840 62628149 -140457383 - AluSg SINE Alu 0 312 1 274 313 98 0 chr5 62628183 62628295 -140457237 + L2 LINE L2 3138 3260 -12 295 247 141 94 chr5 62629515 62629685 -140455847 - MER5B DNA MER1_type 0 178 1 2308 106 0 3 chr5 62629801 62630113 -140455419 - AluY SINE Alu 0 311 1 359 346 106 71 chr5 62630146 62630571 -140454961 - L2 LINE L2 -6 3266 2827 30 0 0 0 chr5 62630660 62630690 -140454842 + AT_rich Low_complexity Low_complexity 1 30 0 213 305 17 0 chr5 62630735 62630794 -140454738 + MIR SINE MIR 203 262 0 358 314 23 103 chr5 62630934 62631323 -140454209 - L2 LINE L2 -669 2645 2288 21 100 0 0 chr5 62631693 62631763 -140453769 + AT_rich Low_complexity Low_complexity 1 70 0 2840 122 16 20 chr5 62631936 62632386 -140453146 - MER83 LTR ERV1 0 448 1 859 296 119 6 chr5 62632501 62632863 -140452669 + LTR33 LTR ERVL 1 403 -118 943 270 85 16 chr5 62632920 62633238 -140452294 + LTR16A LTR ERVL 91 430 -20 210 162 0 0 chr5 62633559 62633596 -140451936 + (TAA)n Simple_repeat Simple_repeat 3 39 0 349 324 133 9 chr5 62635324 62635639 -140449893 - L1MC/D LINE L1 -2048 5760 5407 21 0 0 0 chr5 62635657 62635678 -140449854 + AT_rich Low_complexity Low_complexity 1 21 0 838 171 11 59 chr5 62636094 62636281 -140449251 - MER5B DNA MER1_type 0 178 1 183 80 0 0 chr5 62638574 62638599 -140446933 + (T)n Simple_repeat Simple_repeat 1 25 0 26 50 0 0 chr5 62639849 62639889 -140445643 + AT_rich Low_complexity Low_complexity 1 40 0 465 317 144 18 chr5 62640621 62641003 -140444529 + MLT1K LTR MaLR 146 575 -13 23 54 0 0 chr5 62642338 62642375 -140443157 + AT_rich Low_complexity Low_complexity 1 37 0 1757 237 55 100 chr5 62642395 62643764 -140441768 - L1MC5 LINE L1 -35 7926 6620 674 249 80 80 chr5 62643965 62644454 -140441078 - Charlie7 DNA MER1_type -338 2274 1786 5046 122 5 28 chr5 62644474 62645291 -140440241 - L1PA16 LINE L1 0 6166 5369 422 207 153 13 chr5 62645293 62645443 -140440089 - Charlie7 DNA MER1_type -824 1788 1618 696 292 63 12 chr5 62645445 62645777 -140439755 - Charlie7 DNA MER1_type -1976 636 288 291 263 83 23 chr5 62645852 62645985 -140439547 - Charlie7 DNA MER1_type -2465 147 7 183 184 0 0 chr5 62646390 62646428 -140439104 + (CAA)n Simple_repeat Simple_repeat 2 39 0 212 309 134 31 chr5 62649246 62649343 -140436189 - L2 LINE L2 -17 3255 3149 3842 142 52 34 chr5 62650435 62651149 -140434383 - LTR8A LTR ERV1 0 727 1 198 254 18 55 chr5 62653549 62653604 -140431928 - L2 LINE L2 -7 3265 3213 315 277 34 78 chr5 62653787 62653993 -140431539 + L2 LINE L2 2866 3062 -210 256 340 105 13 chr5 62654203 62654356 -140431176 - MIR3 SINE MIR -41 167 1 448 207 16 0 chr5 62654455 62654562 -140430970 - L1MC4 LINE L1 -2 8038 7671 21 36 0 0 chr5 62654562 62654590 -140430942 + AT_rich Low_complexity Low_complexity 1 28 0 340 20 41 0 chr5 62654591 62654640 -140430892 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 1792 156 30 51 chr5 62654640 62654786 -140430746 + MLT1A1 LTR MaLR 2 150 -215 2141 115 80 15 chr5 62654786 62655124 -140430408 + THE1B LTR MaLR 5 364 0 1792 156 30 51 chr5 62655124 62655348 -140430184 + MLT1A1 LTR MaLR 150 364 -1 768 35 41 47 chr5 62655348 62655519 -140430013 + (TCTA)n Simple_repeat Simple_repeat 3 172 0 1347 234 127 8 chr5 62655568 62655970 -140429562 - L1MC4 LINE L1 -142 7900 7451 3880 255 103 44 chr5 62655973 62657529 -140428003 - L1MC4a LINE L1 -488 7320 5654 2365 162 19 21 chr5 62657529 62657961 -140427571 - Tigger2a DNA MER2_type -1 433 3 3880 255 103 44 chr5 62657961 62658108 -140427424 - L1MC4a LINE L1 -2154 5654 5517 408 331 82 25 chr5 62658216 62658855 -140426677 + L1M4 LINE L1 4377 5052 -1094 262 305 84 0 chr5 62659324 62659419 -140426113 + L2 LINE L2 3184 3286 -27 339 319 14 10 chr5 62659419 62659601 -140425931 - MLT1J2 LTR MaLR 0 414 273 334 261 32 6 chr5 62659616 62659740 -140425792 - MLT1J LTR MaLR -296 178 28 225 0 0 0 chr5 62660945 62660970 -140424562 + (CA)n Simple_repeat Simple_repeat 2 26 0 1345 239 163 21 chr5 62660996 62661795 -140423737 - L1MC4 LINE L1 -161 7881 6809 1327 229 48 7 chr5 62661795 62662088 -140423444 - AluJo SINE Alu -6 306 2 1345 239 163 21 chr5 62662088 62662177 -140423355 - L1MC4 LINE L1 -1233 6809 6734 242 308 48 10 chr5 62662416 62662520 -140423012 + 7SK RNA RNA 18 125 -68 222 274 0 20 chr5 62662965 62663016 -140422516 - MIR3 SINE MIR -144 64 15 276 207 86 0 chr5 62663514 62663572 -140421960 - L2 LINE L2 0 3272 3210 228 299 119 10 chr5 62663575 62663776 -140421756 - L2 LINE L2 -218 3054 2832 2406 75 0 0 chr5 62664305 62664598 -140420934 - AluY SINE Alu -18 293 1 458 275 132 22 chr5 62665041 62665223 -140420309 - LTR67 LTR ERVL -28 529 328 239 304 25 0 chr5 62665362 62665441 -140420091 - LTR67 LTR ERVL -476 81 1 381 297 7 21 chr5 62666085 62666230 -140419302 - ERVL LTR ERVL -767 4997 4855 2135 114 10 0 chr5 62666487 62666776 -140418756 - AluSx SINE Alu -20 292 1 424 218 99 0 chr5 62667950 62668051 -140417481 - FLAM_A SINE Alu -6 136 26 414 211 27 102 chr5 62669306 62669453 -140416079 - MER46C DNA MER2_type -123 215 80 3399 181 6 3 chr5 62669472 62670157 -140415375 - L1 LINE L1 -1029 5117 4431 4375 175 22 21 chr5 62670169 62671179 -140414353 + L1MB1 LINE L1 5152 6163 -5 448 244 30 0 chr5 62671296 62671431 -140414101 + MER103 DNA DNA 7 145 -21 187 256 140 55 chr5 62671586 62671750 -140413782 - L2 LINE L2 -3 3310 3133 490 257 9 0 chr5 62672274 62672387 -140413145 + MER81 DNA DNA 1 114 0 440 330 74 41 chr5 62672742 62673224 -140412308 - L2 LINE L2 0 3313 2726 187 299 63 39 chr5 62673217 62673344 -140412188 - L2 LINE L2 -316 2956 2827 * 313 360 48 16 chr5 62674325 62674514 -140411018 - L3b LINE CR1 -97 1486 1292 202 236 14 83 chr5 62674746 62674818 -140410714 - MER5B DNA MER1_type -111 67 1 297 235 106 0 chr5 62674876 62674961 -140410571 + L2 LINE L2 3142 3235 -37 4359 62 4 0 chr5 62676580 62677132 -140408400 + MER41A LTR ERV1 1 554 0 206 259 69 0 chr5 62680146 62680204 -140405328 - L2 LINE L2 -4 3268 3207 365 320 32 32 chr5 62680320 62680445 -140405087 + L2 LINE L2 3148 3272 0 325 82 49 0 chr5 62680635 62680696 -140404836 + L1MA7 LINE L1 6222 6285 -6 425 286 44 59 chr5 62681161 62681364 -140404168 + L1ME3 LINE L1 5758 5957 -205 363 321 59 50 chr5 62681933 62682154 -140403378 - MIR SINE MIR -34 228 6 624 286 47 9 chr5 62682609 62682822 -140402710 + MLT1I LTR MaLR 1 221 -188 404 191 34 0 chr5 62682841 62682930 -140402602 + MER53 DNA DNA 98 189 0 1664 207 52 3 chr5 62683163 62683511 -140402021 - MLT1A1 LTR MaLR 0 365 1 1420 146 12 8 chr5 62683595 62683841 -140401691 - L1PA16 LINE L1 -9 6157 5911 263 265 129 23 chr5 62684942 62685074 -140400458 - L2 LINE L2 -1 3312 3167 453 270 182 0 chr5 62685774 62685922 -140399610 + MER5A DNA MER1_type 9 183 -6 209 259 0 19 chr5 62686214 62686268 -140399264 + CT-rich Low_complexity Low_complexity 2 54 0 240 143 0 0 chr5 62686269 62686311 -140399221 + (CA)n Simple_repeat Simple_repeat 2 43 0 765 211 0 6 chr5 62687200 62687356 -140398176 + MLT1A1 LTR MaLR 1 155 -210 763 163 0 0 chr5 62687357 62687480 -140398052 + AluJb SINE Alu 178 300 -12 274 313 24 0 chr5 62687528 62687611 -140397921 + L2 LINE L2 2254 2338 -976 932 315 33 10 chr5 62687874 62688264 -140397268 + LTR16C LTR ERVL 89 487 -4 775 246 30 0 chr5 62688564 62688767 -140396765 + MER3 DNA MER1_type 1 209 0 622 343 87 24 chr5 62688771 62689197 -140396335 + L2 LINE L2 2393 2845 -469 307 170 0 0 chr5 62689453 62689506 -140396026 + MER110A LTR ERV1 75 127 -341 216 0 0 0 chr5 62689533 62689557 -140395975 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 353 152 13 25 chr5 62690913 62690992 -140394540 + MER110A LTR ERV1 82 159 -309 429 219 83 89 chr5 62691132 62691403 -140394129 + MER110A LTR ERV1 239 491 0 3776 129 59 27 chr5 62691640 62692390 -140393142 - LTR1 LTR ERV1 -1 784 11 2341 110 3 0 chr5 62692690 62692999 -140392533 + AluSq SINE Alu 1 310 -3 472 335 74 21 chr5 62693434 62693676 -140391856 - MIR SINE MIR -7 255 1 339 279 139 33 chr5 62693937 62694059 -140391473 - L2 LINE L2 -1 3271 3137 2175 226 54 36 chr5 62694095 62695123 -140390409 + L1MD2 LINE L1 4803 5831 -528 292 263 58 82 chr5 62695133 62695304 -140390228 + L2 LINE L2 3095 3261 -52 1844 158 3 22 chr5 62695431 62695747 -140389785 - AluSx SINE Alu -2 310 1 236 284 30 0 chr5 62697047 62697114 -140388418 - L2 LINE L2 0 3272 3204 1708 223 27 38 chr5 62697139 62697618 -140387914 + MLT1D LTR MaLR 16 489 -16 1517 283 91 20 chr5 62697990 62698425 -140387107 + L2 LINE L2 2205 2687 -627 2132 120 20 3 chr5 62698425 62698725 -140386807 - AluSg SINE Alu -5 305 1 1517 283 91 20 chr5 62698725 62698830 -140386702 + L2 LINE L2 2687 2783 -531 2284 193 19 6 chr5 62698830 62699311 -140386221 + L1MB7 LINE L1 5635 6121 -63 282 142 231 112 chr5 62699832 62699966 -140385566 - L2 LINE L2 -5 3308 3159 184 344 103 46 chr5 62700183 62700445 -140385087 - L2 LINE L2 -421 2893 2617 23 0 0 0 chr5 62700509 62700532 -140385000 + AT_rich Low_complexity Low_complexity 1 23 0 3849 261 64 84 chr5 62700633 62702746 -140382786 - L2 LINE L2 -2 3311 1244 4602 145 26 35 chr5 62702750 62703693 -140381839 + MER52C LTR ERV1 1 935 -343 668 126 9 9 chr5 62703693 62703804 -140381728 + MER52C LTR ERV1 1168 1278 0 722 254 214 16 chr5 62703806 62704184 -140381348 - L2 LINE L2 -2080 1234 782 295 261 117 9 chr5 62704182 62704293 -140381239 - MIR SINE MIR -34 228 106 * 204 400 48 0 chr5 62704350 62704455 -140381077 - MIR SINE MIR -63 145 36 2330 167 71 19 chr5 62705308 62705788 -140379744 - MLT1D LTR MaLR 0 505 1 2031 176 8 47 chr5 62706354 62706643 -140378889 - MLT1A1 LTR MaLR 0 365 93 2300 95 7 0 chr5 62706643 62706939 -140378593 - AluSp SINE Alu -14 299 2 2031 176 8 47 chr5 62706939 62707029 -140378503 - MLT1A1 LTR MaLR -272 93 1 423 0 0 0 chr5 62707042 62707089 -140378443 + (TA)n Simple_repeat Simple_repeat 2 48 0 1457 216 122 27 chr5 62707514 62708411 -140377121 - Charlie2 DNA MER1_type -1 2861 1853 1191 251 63 54 chr5 62708478 62709698 -140375834 - L1ME3A LINE L1 0 6170 4906 379 301 75 28 chr5 62709702 62709915 -140375617 - Charlie2 DNA MER1_type -2559 223 1 181 308 0 15 chr5 62710304 62710369 -140375163 - MIR SINE MIR -113 149 86 2822 179 23 0 chr5 62710973 62711531 -140374001 - L1MC3 LINE L1 0 7785 7215 31 26 0 0 chr5 62711600 62711638 -140373894 + AT_rich Low_complexity Low_complexity 1 38 0 2260 99 3 3 chr5 62712264 62712566 -140372966 - AluSp SINE Alu -11 302 1 232 234 143 13 chr5 62712622 62712699 -140372833 - MIR SINE MIR -142 120 34 22 0 0 0 chr5 62713371 62713393 -140372139 + AT_rich Low_complexity Low_complexity 1 22 0 1043 263 152 6 chr5 62714131 62714625 -140370907 + HsTC2 DNA Tc2 1327 1892 -6 2258 160 20 75 chr5 62714983 62715489 -140370043 + MLT2B1 LTR ERVL 1 478 -42 1881 185 89 10 chr5 62715489 62716036 -140369496 - MER7C DNA MER2_type -1 602 14 327 125 0 0 chr5 62716037 62716085 -140369447 + MLT2B1 LTR ERVL 468 515 0 271 349 12 35 chr5 62716357 62716529 -140369003 - MIR SINE MIR -4 258 91 325 258 129 96 chr5 62716805 62717045 -140368487 + MIR SINE MIR 7 254 -8 288 317 109 0 chr5 62719622 62719723 -140365809 + MIR SINE MIR 34 145 -63 286 298 85 11 chr5 62722479 62722573 -140362959 + MIR3 SINE MIR 77 177 -31 1616 221 36 47 chr5 62722637 62723108 -140362424 - MLT1C LTR MaLR 0 467 2 267 239 28 55 chr5 62723469 62723578 -140361954 + LTR33 LTR ERVL 410 515 -6 294 331 55 31 chr5 62724152 62724315 -140361217 - MIR SINE MIR -78 184 18 22 35 0 0 chr5 62725303 62725332 -140360200 + AT_rich Low_complexity Low_complexity 1 29 0 226 295 49 0 chr5 62727577 62727638 -140357894 + MER81 DNA DNA 7 70 -44 1323 210 93 29 chr5 62727757 62728100 -140357432 - MLT1A1 LTR MaLR 0 365 1 3564 250 63 57 chr5 62728333 62731330 -140354202 - L1MEc LINE L1 -3207 3008 36 1196 349 60 37 chr5 62731382 62732190 -140353342 + L2 LINE L2 2255 3085 -228 2099 114 0 35 chr5 62732190 62732507 -140353025 - AluSc SINE Alu -3 306 1 1196 349 60 37 chr5 62732507 62732700 -140352832 + L2 LINE L2 3085 3272 -41 199 220 120 0 chr5 62732971 62733021 -140352511 + L2 LINE L2 3257 3312 -1 446 303 42 7 chr5 62733696 62733838 -140351694 - MIR SINE MIR -67 195 49 2046 130 19 3 chr5 62733877 62734184 -140351348 + AluSq SINE Alu 1 312 -1 287 302 120 52 chr5 62734643 62734934 -140350598 - L2 LINE L2 -1 3312 3002 197 385 0 44 chr5 62734936 62735027 -140350505 - MIR SINE MIR -75 133 47 5559 129 40 5 chr5 62735052 62736201 -140349331 - L1PA16 LINE L1 -5 6161 4994 334 279 65 13 chr5 62737014 62737168 -140348364 - L1M4 LINE L1 -1453 4693 4532 518 247 38 44 chr5 62737667 62737825 -140347707 + MIR SINE MIR 105 261 -1 2589 48 0 3 chr5 62738152 62738461 -140347071 + AluY SINE Alu 1 308 -3 361 293 17 63 chr5 62738493 62738793 -140346739 - L1MDa LINE L1 -4480 2060 1775 350 295 166 0 chr5 62739202 62739341 -140346191 + MIR SINE MIR 11 172 -90 193 368 11 21 chr5 62739493 62739588 -140345944 - L2 LINE L2 -290 2982 2889 785 262 49 9 chr5 62739711 62739936 -140345596 + LTR16C LTR ERVL 169 402 -89 361 322 81 13 chr5 62740504 62740653 -140344879 - MIR3 SINE MIR -29 179 21 25 0 0 0 chr5 62740930 62740955 -140344577 + AT_rich Low_complexity Low_complexity 1 25 0 5322 170 34 8 chr5 62740972 62742897 -140342635 - L1PA16 LINE L1 -4 6162 4192 240 182 40 81 chr5 62742973 62743072 -140342460 + L1 LINE L1 3178 3272 -2874 * 2528 275 1 4 chr5 62743069 62743833 -140341699 - L1M4 LINE L1 -2960 3186 2425 221 308 24 53 chr5 62743877 62744046 -140341486 + L2 LINE L2 2004 2167 -1147 368 368 81 58 chr5 62744735 62745167 -140340365 + L2 LINE L2 2826 3267 -5 314 349 78 103 chr5 62745414 62746133 -140339399 + L2 LINE L2 2573 3272 0 246 338 56 0 chr5 62747438 62747509 -140338023 + MIR SINE MIR 66 140 -68 22 0 0 0 chr5 62747927 62747949 -140337583 + AT_rich Low_complexity Low_complexity 1 22 0 440 305 23 28 chr5 62748114 62748291 -140337241 + MER91A DNA MER1_type 1 176 -20 936 174 14 47 chr5 62748559 62748771 -140336761 - MER3 DNA MER1_type -4 205 1 861 306 125 18 chr5 62749096 62749599 -140335933 - L1MC4a LINE L1 -1911 5966 5410 21 0 0 0 chr5 62751154 62751175 -140334357 + AT_rich Low_complexity Low_complexity 1 21 0 2310 241 100 45 chr5 62751249 62751579 -140333953 + Zaphod DNA AcHobo 10 320 -3711 7154 35 6 2 chr5 62751579 62752449 -140333083 + L1PA4 LINE L1 5283 6155 0 2310 241 100 45 chr5 62752449 62753067 -140332465 + Zaphod DNA AcHobo 320 1010 -3021 1348 245 39 15 chr5 62753041 62753453 -140332079 + Zaphod DNA AcHobo 3595 4016 -15 * 34 65 0 0 chr5 62754416 62754478 -140331054 + AT_rich Low_complexity Low_complexity 1 62 0 378 61 0 0 chr5 62755014 62755063 -140330469 + (TG)n Simple_repeat Simple_repeat 2 50 0 350 317 7 55 chr5 62756172 62756317 -140329215 - L2 LINE L2 -4 3309 3172 2369 98 0 0 chr5 62756750 62757055 -140328477 + AluSc SINE Alu 1 305 -4 267 228 0 0 chr5 62758029 62758086 -140327446 + L2 LINE L2 3257 3313 0 357 317 154 24 chr5 62759684 62759892 -140325640 - MIR SINE MIR -13 249 15 3648 233 66 24 chr5 62759908 62760651 -140324881 - L1MC4a LINE L1 -880 5335 4519 2220 61 0 0 chr5 62760651 62760914 -140324618 + AluY SINE Alu 39 301 -10 3648 233 66 24 chr5 62760914 62761404 -140324128 - L1MC4a LINE L1 -1696 4519 4051 2950 248 86 26 chr5 62761423 62762307 -140323225 - L1MEc LINE L1 -2751 3464 2510 2266 108 3 0 chr5 62762307 62762603 -140322929 - AluSx SINE Alu -15 297 1 2950 248 86 26 chr5 62762603 62763074 -140322458 - L1MEc LINE L1 -3705 2510 2068 227 183 67 0 chr5 62763119 62763179 -140322353 - L1MEc LINE L1 -4309 2087 2024 2229 121 0 3 chr5 62763687 62763993 -140321539 + AluSx SINE Alu 4 308 -4 261 182 0 0 chr5 62764234 62764289 -140321243 + GA-rich Low_complexity Low_complexity 4 58 0 545 275 161 56 chr5 62764327 62764802 -140320730 - L3 LINE CR1 -170 1407 801 194 235 44 29 chr5 62764819 62764887 -140320645 - MIR SINE MIR -21 241 173 24 53 0 0 chr5 62765884 62765922 -140319610 + AT_rich Low_complexity Low_complexity 1 38 0 296 296 9 0 chr5 62766017 62766125 -140319407 + (TG)n Simple_repeat Simple_repeat 1 109 0 229 316 125 30 chr5 62766555 62766723 -140318809 - MIR SINE MIR -66 196 13 2206 128 0 0 chr5 62767446 62767744 -140317788 - AluSx SINE Alu -14 298 1 1566 135 95 36 chr5 62767871 62768168 -140317364 - AluJb SINE Alu 0 312 4 2342 101 62 8 chr5 62768980 62769335 -140316197 - THE1C LTR MaLR 0 375 2 216 111 0 0 chr5 62770156 62770192 -140315340 + (CA)n Simple_repeat Simple_repeat 2 37 0 449 347 0 0 chr5 62770348 62770472 -140315060 - L2 LINE L2 -13 3259 3136 1799 206 84 2 chr5 62770699 62771126 -140314406 + MLT1C LTR MaLR 6 467 0 676 167 92 6 chr5 62771222 62771396 -140314136 - MER53 DNA DNA 0 189 1 268 295 115 59 chr5 62771469 62771808 -140313724 - L2 LINE L2 -1465 1849 1492 1822 128 65 74 chr5 62771965 62772332 -140313200 + THE1B LTR MaLR 1 364 0 234 309 154 20 chr5 62772470 62772619 -140312913 - L2 LINE L2 -1913 1401 1233 192 237 0 0 chr5 62775294 62775332 -140310200 - MIR SINE MIR -5 257 220 346 298 187 5 chr5 62775428 62775626 -140309906 + MIR SINE MIR 24 257 -5 2074 83 0 14 chr5 62775641 62775918 -140309614 + AluY SINE Alu 34 306 -5 512 324 29 25 chr5 62776160 62776398 -140309134 - MIR SINE MIR -7 255 17 260 353 193 5 chr5 62776842 62777029 -140308503 - MIR SINE MIR -10 252 31 2237 167 55 5 chr5 62777678 62778116 -140307416 - MLT1C LTR MaLR -2 465 6 1807 125 32 21 chr5 62779351 62779666 -140305866 + AluSx SINE Alu 1 318 0 182 206 0 0 chr5 62780498 62780532 -140305000 - L2 LINE L2 -2 3270 3237 873 249 58 38 chr5 62780652 62781049 -140304483 - HAL1 LINE L1 -3 2504 2100 410 290 102 39 chr5 62781068 62781430 -140304102 - HAL1 LINE L1 -2115 392 8 275 284 95 35 chr5 62781442 62781558 -140303974 - MIR SINE MIR -69 193 71 685 300 4 32 chr5 62782279 62782526 -140303006 + MIR SINE MIR 2 241 -21 194 323 54 32 chr5 62782673 62782766 -140302766 - L2 LINE L2 -61 3211 3117 1248 129 77 0 chr5 62783657 62783905 -140301627 + L1MA8 LINE L1 6022 6288 -3 712 269 23 55 chr5 62784235 62784492 -140301040 - MIR SINE MIR 0 262 14 743 215 114 29 chr5 62784661 62784907 -140300625 + L1MC3 LINE L1 7519 7785 0 1040 274 88 14 chr5 62785683 62786117 -140299415 - LTR33A LTR ERVL 0 523 58 489 316 46 27 chr5 62786172 62786435 -140299097 + L2 LINE L2 2587 2854 -460 2298 81 0 7 chr5 62786753 62787050 -140298482 - AluY SINE Alu -16 295 1 196 261 0 0 chr5 62787539 62787585 -140297947 - L2 LINE L2 -14 3299 3254 334 276 68 9 chr5 62787608 62787732 -140297800 - MIR SINE MIR -64 144 25 828 254 62 8 chr5 62788072 62788316 -140297216 - LTR16A LTR ERVL -15 435 179 26 74 0 0 chr5 62788543 62788597 -140296935 + AT_rich Low_complexity Low_complexity 1 54 0 450 133 89 0 chr5 62789397 62789487 -140296045 + MER4A LTR ERV1 1 98 -566 1544 136 13 85 chr5 62789543 62789860 -140295672 + MER4A LTR ERV1 371 664 0 1188 180 68 84 chr5 62789999 62790382 -140295150 + MSTD LTR MaLR 3 379 -17 212 233 0 58 chr5 62790480 62790566 -140294966 + (TTTA)n Simple_repeat Simple_repeat 1 81 0 1825 111 0 22 chr5 62790867 62791137 -140294395 - AluSq SINE Alu -10 303 40 945 123 14 20 chr5 62791140 62791286 -140294246 - AluSp/q SINE Alu -14 299 155 422 234 73 58 chr5 62791299 62791436 -140294096 + MIR SINE MIR 74 212 -50 212 238 100 25 chr5 62791555 62791635 -140293897 - L3 LINE CR1 -4 1573 1488 21 57 0 0 chr5 62792858 62792893 -140292639 + AT_rich Low_complexity Low_complexity 1 35 0 978 316 35 26 chr5 62796171 62796601 -140288931 - LTR16A LTR ERVL 0 450 17 536 234 23 8 chr5 62796864 62796992 -140288540 - FLAM_C SINE Alu -3 130 1 687 346 36 28 chr5 62797179 62797679 -140287853 - HERVL LTR ERVL -642 5122 4619 2189 112 0 10 chr5 62797811 62798114 -140287418 - AluSx SINE Alu -12 300 1 620 342 38 50 chr5 62798167 62798691 -140286841 - HERVL LTR ERVL -1358 4296 3818 2538 293 49 19 chr5 62798692 62799446 -140286086 - HERVL LTR ERVL -3942 1054 261 2174 108 0 3 chr5 62799446 62799741 -140285791 + AluSg SINE Alu 1 294 -16 2538 293 49 19 chr5 62799741 62800010 -140285522 - HERVL LTR ERVL -4735 261 1 1499 268 19 23 chr5 62800010 62800439 -140285093 - LTR16A LTR ERVL 0 450 24 1926 131 62 3 chr5 62800779 62801069 -140284463 - AluSx SINE Alu -5 307 1 206 335 112 34 chr5 62801245 62801424 -140284108 + MIR SINE MIR 10 202 -60 24 0 0 0 chr5 62802455 62802479 -140283053 + AT_rich Low_complexity Low_complexity 1 24 0 463 228 69 0 chr5 62802988 62803089 -140282443 - MIR3 SINE MIR -20 188 81 24 32 0 0 chr5 62806287 62806318 -140279214 + AT_rich Low_complexity Low_complexity 1 31 0 1524 108 4 39 chr5 62806318 62806576 -140278956 - L1MA2 LINE L1 -7 6297 6049 327 65 0 0 chr5 62806576 62806622 -140278910 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 13450 30 1 0 chr5 62806622 62808980 -140276552 - L1PA3 LINE L1 -13 6142 3784 1161 122 33 0 chr5 62809198 62809379 -140276153 + L1PA15 LINE L1 5979 6165 0 779 258 39 29 chr5 62809384 62809999 -140275533 - L1MEd LINE L1 -4750 1560 904 435 207 76 65 chr5 62810067 62810280 -140275252 - LTR48 LTR ERV1 0 787 387 341 237 42 34 chr5 62810454 62810572 -140274960 - L1MC4a LINE L1 -1630 6178 6060 1935 103 67 34 chr5 62810572 62810930 -140274602 - THE1C LTR MaLR 0 375 6 353 250 125 8 chr5 62811004 62811124 -140274408 - HAL1 LINE L1 -131 2376 2243 1453 94 0 11 chr5 62813297 62813488 -140272044 + AluSx SINE Alu 29 217 -95 790 91 0 0 chr5 62813592 62813702 -140271830 + THE1C LTR MaLR 231 340 -35 2307 90 0 19 chr5 62813703 62814014 -140271518 - AluSc SINE Alu -4 305 1 1789 196 72 22 chr5 62814098 62814543 -140270989 + MLT1C LTR MaLR 1 467 0 2081 135 0 0 chr5 62814615 62814897 -140270635 + AluSx SINE Alu 3 284 -28 382 352 31 0 chr5 62815339 62815498 -140270034 + L1ME LINE L1 151 314 -5891 264 263 179 6 chr5 62815753 62815909 -140269623 + L1ME LINE L1 783 965 -5431 1017 195 189 40 chr5 62816119 62816499 -140269033 - LTR64 LTR ERVK 0 558 122 2500 76 0 0 chr5 62817006 62817307 -140268225 - AluY SINE Alu -10 301 1 2622 126 139 4 chr5 62817452 62817780 -140267752 - Tigger3(Golem) DNA MER2_type -1 3028 2621 197 33 33 0 chr5 62817780 62817810 -140267722 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 2622 126 139 4 chr5 62817810 62817933 -140267599 - Tigger3(Golem) DNA MER2_type -408 2621 2516 2196 94 13 0 chr5 62818161 62818459 -140267073 + AluSx SINE Alu 1 302 -10 280 244 44 0 chr5 62819758 62819848 -140265684 - L1MC4a LINE L1 -1971 5837 5744 524 174 0 22 chr5 62819911 62820003 -140265529 - AluSg/x SINE Alu -15 297 208 371 179 60 12 chr5 62820253 62820337 -140265195 + L1ME4a LINE L1 5976 6063 -58 314 277 44 66 chr5 62820891 62821028 -140264504 + L3 LINE CR1 1298 1431 -146 866 217 101 9 chr5 62821050 62821267 -140264265 + L1M4 LINE L1 26 262 -6280 432 111 0 0 chr5 62821268 62821322 -140264210 + AluS SINE Alu 14 67 -246 1749 184 0 0 chr5 62821575 62821869 -140263663 + AluJo SINE Alu 6 299 -13 2206 109 0 0 chr5 62823144 62823453 -140262079 - AluSx SINE Alu 0 309 1 320 367 50 0 chr5 62823622 62823761 -140261771 - L2 LINE L2 -4 3268 3123 838 102 8 0 chr5 62823958 62824076 -140261456 + AluSg/x SINE Alu 186 304 -6 908 159 0 0 chr5 62824174 62824306 -140261226 + FLAM_C SINE Alu 1 132 -1 21 0 0 0 chr5 62824306 62824327 -140261205 + AT_rich Low_complexity Low_complexity 1 21 0 1528 194 10 24 chr5 62824328 62824617 -140260915 + AluJb SINE Alu 1 285 -27 813 124 33 0 chr5 62824735 62824856 -140260676 + FLAM_C SINE Alu 1 125 -18 1680 117 117 8 chr5 62824870 62825134 -140260398 + AluSg1 SINE Alu 11 303 -6 682 161 17 0 chr5 62825134 62825252 -140260280 + L1M4c LINE L1 1467 1586 -4798 3164 219 35 78 chr5 62825362 62826412 -140259120 + L1P3 LINE L1 736 1706 -4755 807 229 17 23 chr5 62826566 62826741 -140258791 + LTR28 LTR ERV1 846 1019 -1 2159 123 0 10 chr5 62826777 62827085 -140258447 - AluSx SINE Alu -7 305 1 2278 121 0 0 chr5 62827242 62827548 -140257984 - AluSq SINE Alu -7 306 1 577 247 156 25 chr5 62827865 62828108 -140257424 + ORSL DNA AcHobo 1 275 0 483 285 25 38 chr5 62828373 62828531 -140257001 - MIR SINE MIR -75 187 32 1990 113 10 7 chr5 62829105 62829398 -140256134 + AluSx SINE Alu 3 296 -16 1336 214 65 51 chr5 62829398 62829846 -140255686 - L1M4 LINE L1 -1113 5033 4580 22 0 0 0 chr5 62829862 62829884 -140255648 + AT_rich Low_complexity Low_complexity 1 22 0 1184 117 12 0 chr5 62829884 62830046 -140255486 - AluSg/x SINE Alu -25 287 124 8382 149 4 7 chr5 62830172 62831013 -140254519 + L1P LINE L1 3819 4662 -1484 2233 124 0 0 chr5 62831013 62831311 -140254221 + AluSx SINE Alu 1 298 -14 234 0 0 0 chr5 62831311 62831337 -140254195 + (TA)n Simple_repeat Simple_repeat 2 27 0 8382 149 4 7 chr5 62831337 62831859 -140253673 + L1P LINE L1 4660 5178 -968 7776 115 11 3 chr5 62832007 62833205 -140252327 + L1P LINE L1 2157 3363 -2783 2475 149 7 14 chr5 62836333 62836688 -140248844 + L1 LINE L1 4618 4971 -1175 2390 164 98 26 chr5 62836688 62837145 -140248387 - LTR2B LTR ERV1 0 490 1 2475 149 7 14 chr5 62837145 62837232 -140248300 + L1 LINE L1 4971 5057 -1089 1876 133 14 14 chr5 62837232 62837525 -140248007 + AluJb SINE Alu 1 293 -19 273 261 99 10 chr5 62837531 62837779 -140247753 + L1ME LINE L1 5586 5776 -345 1909 121 76 0 chr5 62838115 62838405 -140247127 - AluSx SINE Alu 0 312 1 2152 113 3 0 chr5 62838755 62839048 -140246484 - AluSx SINE Alu -18 294 1 262 319 169 19 chr5 62839237 62839397 -140246135 + L3 LINE CR1 1323 1506 -71 1202 76 13 0 chr5 62839609 62839766 -140245766 - L1MA2 LINE L1 0 6304 6146 399 275 6 44 chr5 62942992 62943174 -140142358 + GA-rich Low_complexity Low_complexity 6 180 0 583 279 64 15 chr5 62951144 62951348 -140134184 - MIR SINE MIR -1 261 48 418 242 115 40 chr5 62951371 62951627 -140133905 - MLT1J2 LTR MaLR -14 432 146 405 292 0 9 chr5 62951628 62951741 -140133791 - MLT1J1 LTR MaLR -334 112 1 21 36 0 0 chr5 62951855 62951883 -140133649 + AT_rich Low_complexity Low_complexity 1 28 0 333 187 0 0 chr5 62952040 62952115 -140133417 + T-rich Low_complexity Low_complexity 1 75 0 1181 189 59 31 chr5 62952828 62953114 -140132418 + AluJo SINE Alu 13 306 -6 399 193 0 0 chr5 62953139 62953222 -140132310 + GA-rich Low_complexity Low_complexity 4 86 0 28 48 0 0 chr5 62953520 62953562 -140131970 + AT_rich Low_complexity Low_complexity 1 42 0 13135 42 16 56 chr5 62954598 62956513 -140129019 - L1P LINE L1 -1454 4692 2855 387 0 0 0 chr5 62956900 62956943 -140128589 + (CA)n Simple_repeat Simple_repeat 2 44 0 31 44 0 0 chr5 62957561 62957606 -140127926 + AT_rich Low_complexity Low_complexity 1 45 0 44103 32 23 1 chr5 62958472 62963999 -140121533 - L1P1 LINE L1 -502 5653 1 210 322 26 35 chr5 62964377 62964492 -140121040 + MIR SINE MIR 1 114 -148 3801 112 110 0 chr5 62965403 62965975 -140119557 - MER41B LTR ERV1 0 635 1 12576 132 30 19 chr5 62965975 62968372 -140117160 - MER41B-int LTR ERV1 0 5946 1855 1857 151 69 58 chr5 62968360 62968884 -140116648 - MER41B-int LTR ERV1 -3098 2848 979 * 861 146 98 12 chr5 62968885 62969049 -140116483 - MER41-int LTR ERV1 -4184 1762 1585 468 318 119 46 chr5 62969163 62969465 -140116067 + L3 LINE CR1 1250 1573 -4 2567 56 0 0 chr5 62969666 62969969 -140115563 + AluY SINE Alu 1 303 -8 38731 48 6 3 chr5 62970165 62971401 -140114131 + L1P LINE L1 8 1238 -4908 2122 60 53 11 chr5 62971401 62971683 -140113849 + AluY SINE Alu 1 294 -17 38731 48 6 3 chr5 62971683 62975224 -140110308 + L1P LINE L1 1238 4802 -1344 667 310 121 50 chr5 62975957 62976460 -140109072 - L2 LINE L2 -848 2466 1928 2859 137 29 11 chr5 62977724 62978200 -140107332 - HSMAR2 DNA Mariner -76 1226 742 3093 137 2 32 chr5 62978258 62978762 -140106770 - HSMAR2 DNA Mariner -813 489 1 207 0 0 0 chr5 62978995 62979018 -140106514 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 487 235 10 10 chr5 62979511 62979609 -140105923 + MER81 DNA DNA 9 106 -8 360 323 65 40 chr5 62980614 62980815 -140104717 - MIR SINE MIR -50 212 7 855 189 14 0 chr5 62980849 62980997 -140104535 - AluJb SINE Alu -13 299 150 306 279 11 21 chr5 62981006 62981189 -140104343 + GA-rich Low_complexity Low_complexity 1 272 0 273 271 12 41 chr5 62981266 62981436 -140104096 + GA-rich Low_complexity Low_complexity 3 167 0 364 152 0 51 chr5 62981626 62981705 -140103827 - HsTC2 DNA Tc2 -1 1897 1823 35015 43 33 16 chr5 62981708 62986395 -140099137 + L1P LINE L1 1 4766 -1380 6111 114 37 34 chr5 62986713 62989425 -140096107 + SVA Other Other 5 1385 -1 320 280 37 19 chr5 62989427 62989534 -140095998 - MIR SINE MIR -106 156 48 393 220 0 106 chr5 62990739 62990880 -140094652 + MIR SINE MIR 79 204 -58 900 364 92 39 chr5 62991117 62992167 -140093365 + L2 LINE L2 2116 3221 -51 1293 244 33 67 chr5 62992167 62992647 -140092885 - MLT2C2 LTR ERVL 0 464 1 900 364 92 39 chr5 62992647 62992697 -140092835 + L2 LINE L2 3221 3267 -5 975 185 19 12 chr5 62992914 62993076 -140092456 + FRAM SINE Alu 1 163 -3 27043 38 6 1 chr5 62993671 62997738 -140087794 + L1PA3 LINE L1 2106 6192 0 1154 217 51 0 chr5 62997738 62997973 -140087559 + MLT1C LTR MaLR 221 467 0 200 277 64 0 chr5 62998017 62998064 -140087468 + L2 LINE L2 3160 3209 -63 315 279 30 79 chr5 62998593 62998758 -140086774 + HAL1 LINE L1 10 166 -2341 420 291 70 25 chr5 62999223 62999539 -140085993 + HAL1 LINE L1 816 1145 -1362 519 226 231 11 chr5 62999556 62999742 -140085790 - MIR SINE MIR -35 227 1 664 294 63 0 chr5 62999755 62999993 -140085539 - MIR SINE MIR -1 261 9 695 263 112 76 chr5 62999994 63000191 -140085341 + HAL1 LINE L1 1164 1352 -1155 1757 153 55 71 chr5 63000191 63000571 -140084961 - THE1C LTR MaLR 0 375 2 695 263 112 76 chr5 63000571 63001087 -140084445 + HAL1 LINE L1 1352 1903 -604 5017 208 3 8 chr5 63001324 63002258 -140083274 - MSTA-int LTR MaLR -721 930 1 2185 174 64 15 chr5 63002258 63002591 -140082941 - MSTA LTR MaLR 0 428 70 2277 125 61 19 chr5 63002591 63002951 -140082581 + THE1C LTR MaLR 1 375 0 2185 174 64 15 chr5 63002951 63003025 -140082507 - MSTA LTR MaLR -358 70 1 704 91 0 10 chr5 63003161 63003260 -140082272 + MER4A LTR ERV1 1 98 -566 1738 129 8 82 chr5 63003260 63003633 -140081899 + MER4A LTR ERV1 261 664 0 619 74 0 12 chr5 63003737 63003818 -140081714 - MADE1 DNA Mariner 0 80 1 279 250 57 80 chr5 63003930 63004106 -140081426 + HAL1 LINE L1 2329 2500 -7 251 259 0 0 chr5 63004390 63004444 -140081088 - L2 LINE L2 0 3272 3219 245 243 43 0 chr5 63005873 63005943 -140079589 + (CATATA)n Simple_repeat Simple_repeat 4 76 0 373 180 9 99 chr5 63005947 63006058 -140079474 - L1MC5 LINE L1 -48 7913 7813 230 183 86 118 chr5 63006207 63006300 -140079232 - L2 LINE L2 -76 3196 3107 366 340 37 31 chr5 63006420 63006582 -140078950 - MIR SINE MIR -87 175 13 22 0 0 0 chr5 63006898 63006920 -140078612 + AT_rich Low_complexity Low_complexity 1 22 0 2214 99 14 89 chr5 63007442 63007938 -140077594 + L1PA2 LINE L1 5695 6153 -2 322 202 17 92 chr5 63007958 63008077 -140077455 - MER104 DNA Tc2 -66 114 5 613 247 134 17 chr5 63008385 63008616 -140076916 + MIR SINE MIR 5 262 0 278 368 19 9 chr5 63009038 63009144 -140076388 + MIR SINE MIR 20 126 -136 2907 206 112 40 chr5 63009153 63010129 -140075403 - L1MC4 LINE L1 -1 8041 6996 940 198 6 0 chr5 63010178 63010335 -140075197 - FRAM SINE Alu -6 160 3 2325 74 3 0 chr5 63010475 63010774 -140074758 - AluY SINE Alu -11 300 1 900 201 181 35 chr5 63010820 63011160 -140074372 - L1ME1 LINE L1 -2 6164 5757 848 234 23 19 chr5 63011409 63011623 -140073909 + MIR SINE MIR 45 259 -3 2188 96 3 17 chr5 63012752 63013094 -140072438 - AluSp SINE Alu 0 313 1 237 241 138 43 chr5 63014110 63014226 -140071306 + MER5B DNA MER1_type 1 127 -51 406 55 0 0 chr5 63014266 63014321 -140071211 - L1MB4 LINE L1 -3 6177 6123 234 143 0 0 chr5 63014745 63014794 -140070738 + (TG)n Simple_repeat Simple_repeat 2 50 0 1074 161 0 0 chr5 63016255 63016416 -140069116 - AluJb SINE Alu -15 297 137 27896 45 8 2 chr5 63017916 63022667 -140062865 + L1P LINE L1 3 4768 -1378 491 223 38 24 chr5 63022792 63023021 -140062511 - L1ME1 LINE L1 -737 5429 5199 919 211 14 24 chr5 63023182 63023391 -140062141 - AluJo SINE Alu -19 293 87 693 137 53 0 chr5 63023685 63023816 -140061716 - L1MD3 LINE L1 -951 7044 6907 303 328 69 0 chr5 63024769 63024885 -140060647 - MER5B DNA MER1_type -39 139 16 347 222 0 14 chr5 63025082 63025154 -140060378 - MER45 DNA AcHobo 0 1581 1511 1001 160 0 29 chr5 63025154 63025329 -140060203 + FRAM SINE Alu 1 166 -10 318 320 21 0 chr5 63025331 63025428 -140060104 - MER45 DNA AcHobo -930 110 12 239 216 39 0 chr5 63025724 63025775 -140059757 + (CATA)n Simple_repeat Simple_repeat 4 56 0 216 0 0 0 chr5 63027143 63027167 -140058365 + (TG)n Simple_repeat Simple_repeat 2 25 0 32 75 0 0 chr5 63027261 63027328 -140058204 + AT_rich Low_complexity Low_complexity 1 67 0 1030 171 6 0 chr5 63027393 63027568 -140057964 + L1PA15 LINE L1 5977 6152 -13 186 43 0 0 chr5 63027568 63027591 -140057941 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 63027638 63027662 -140057870 + AT_rich Low_complexity Low_complexity 1 24 0 11450 139 12 4 chr5 63027665 63030368 -140055164 - L1PA11 LINE L1 -2 7610 4881 10694 225 29 30 chr5 63030399 63034261 -140051271 - L1PA11 LINE L1 -2629 4955 10 25 0 0 0 chr5 63034274 63034299 -140051233 + AT_rich Low_complexity Low_complexity 1 25 0 3783 76 63 3 chr5 63034686 63035646 -140049886 - MER11A LTR ERVK 0 1266 3 23 33 0 0 chr5 63035648 63035678 -140049854 + AT_rich Low_complexity Low_complexity 1 30 0 239 309 25 12 chr5 63035791 63035872 -140049660 - L2 LINE L2 -300 3013 2932 2668 95 0 6 chr5 63035943 63036300 -140049232 - THE1A LTR MaLR 0 355 1 21 36 0 0 chr5 63036597 63036625 -140048907 + AT_rich Low_complexity Low_complexity 1 28 0 831 93 17 0 chr5 63038034 63038152 -140047380 + AluSg/x SINE Alu 179 298 -14 5479 130 5 3 chr5 63039276 63040221 -140045311 - L1PB3 LINE L1 -6 6148 5203 21 82 0 0 chr5 63040912 63040961 -140044571 + AT_rich Low_complexity Low_complexity 1 49 0 462 329 49 0 chr5 63041566 63041730 -140043802 - MIR SINE MIR -44 218 47 331 261 116 35 chr5 63042112 63042311 -140043221 + L2 LINE L2 3099 3313 0 1764 190 0 19 chr5 63042783 63043099 -140042433 - AluJo SINE Alu -2 310 1 725 167 0 8 chr5 63043101 63043233 -140042299 - AluJo/FLAM SINE Alu -181 131 1 710 149 92 14 chr5 63044408 63044549 -140040983 - L1P5 LINE L1 -489 5667 5516 556 331 6 0 chr5 63044550 63044707 -140040825 + MIR3 SINE MIR 41 198 -10 417 357 30 10 chr5 63044777 63044976 -140040556 + MIR SINE MIR 40 242 -20 408 337 80 62 chr5 63045899 63046335 -140039197 + L2 LINE L2 2828 3271 -1 2213 220 20 2 chr5 63046906 63047397 -140038135 + Tigger7 DNA MER2_type 1 500 -233 637 173 202 0 chr5 63047396 63047564 -140037968 + Tigger7 DNA MER2_type 2384 2585 -2 * 24 0 0 0 chr5 63047632 63047656 -140037876 + AT_rich Low_complexity Low_complexity 1 24 0 874 195 37 74 chr5 63048137 63048572 -140036960 - MLT1A2 LTR MaLR -7 382 1 206 336 10 29 chr5 63049165 63049269 -140036263 + GA-rich Low_complexity Low_complexity 3 104 0 1157 214 134 27 chr5 63049461 63049910 -140035622 + LTR54B LTR ERV1 1 497 -1 719 255 6 96 chr5 63050387 63050720 -140034812 + L2 LINE L2 2054 2356 -958 517 292 44 32 chr5 63050912 63051205 -140034327 + MLT1L LTR MaLR 233 611 -3 592 320 114 29 chr5 63051209 63051919 -140033613 + L2 LINE L2 2371 3144 -169 503 247 237 13 chr5 63051924 63052540 -140032992 - LTR50 LTR ERVL 0 795 3 224 277 63 132 chr5 63052549 63052708 -140032824 + L2 LINE L2 3125 3272 0 272 332 50 78 chr5 63053096 63053379 -140032153 - L2 LINE L2 -450 2864 2590 1464 164 0 7 chr5 63053602 63053883 -140031649 - L1PA13 LINE L1 -7 6156 5878 640 118 5 9 chr5 63053884 63054010 -140031522 - L1PA13 LINE L1 -342 5823 5695 280 312 54 0 chr5 63055386 63055479 -140030053 + L2 LINE L2 3211 3308 -5 444 280 80 7 chr5 63055884 63056034 -140029498 - MIR SINE MIR -46 216 56 200 324 102 19 chr5 63056124 63056232 -140029300 + L2 LINE L2 3155 3271 -1 21 36 0 0 chr5 63057875 63057903 -140027629 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 63057928 63057948 -140027584 + (TTA)n Simple_repeat Simple_repeat 2 21 0 313 165 200 0 chr5 63058141 63058226 -140027306 - MER103 DNA DNA -2 164 63 428 232 216 32 chr5 63058293 63058483 -140027049 - MIR SINE MIR -30 232 8 313 267 81 113 chr5 63058767 63058988 -140026544 - L2 LINE L2 -16 3256 3043 204 258 0 97 chr5 63059286 63059379 -140026153 + MIR SINE MIR 97 180 -82 2113 119 7 0 chr5 63060154 63060447 -140025085 + AluSp SINE Alu 1 295 -18 314 311 42 25 chr5 63060650 63060769 -140024763 - MER5A DNA MER1_type -6 183 63 304 173 0 0 chr5 63060921 63060973 -140024559 - MER5B DNA MER1_type -126 52 1 1400 234 94 35 chr5 63061469 63061982 -140023550 + L1ME3 LINE L1 5620 6162 0 2084 141 0 0 chr5 63063009 63063306 -140022226 - AluJb SINE Alu -15 297 1 268 256 39 0 chr5 63064040 63064121 -140021411 + MIR SINE MIR 55 143 -65 556 333 0 0 chr5 63064133 63064277 -140021255 + MER5B DNA MER1_type 1 144 -34 2235 87 3 7 chr5 63064467 63064766 -140020766 + AluSq SINE Alu 3 300 -13 453 116 0 0 chr5 63064766 63064835 -140020697 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 756 286 42 21 chr5 63064869 63065107 -140020425 - MIR SINE MIR -2 260 18 630 316 66 17 chr5 63065610 63066075 -140019457 + L2 LINE L2 2594 3078 -235 258 288 139 52 chr5 63067925 63068391 -140017141 + L2 LINE L2 2806 3312 -1 207 302 42 0 chr5 63068449 63068545 -140016987 + (CATATA)n Simple_repeat Simple_repeat 5 104 0 2054 129 0 10 chr5 63069188 63069482 -140016050 + AluSq SINE Alu 1 291 -22 355 237 251 38 chr5 63069856 63070143 -140015389 - MLT1K LTR MaLR -120 468 121 2450 183 22 22 chr5 63070476 63071011 -140014521 + MER67A LTR ERV1 1 535 -8 23 0 0 0 chr5 63071549 63071572 -140013960 + AT_rich Low_complexity Low_complexity 1 23 0 345 186 35 23 chr5 63072333 63072419 -140013113 - Charlie2 DNA MER1_type -29 2833 2747 2508 118 20 0 chr5 63072419 63072776 -140012756 + THE1B LTR MaLR 1 364 0 9541 111 56 40 chr5 63072776 63074331 -140011201 + THE1B-int LTR MaLR 1 1580 0 2776 89 0 0 chr5 63074335 63074695 -140010837 + THE1B LTR MaLR 5 364 0 443 181 219 19 chr5 63074733 63074893 -140010639 - Charlie2a DNA MER1_type -1199 1663 1472 231 167 0 0 chr5 63075154 63075196 -140010336 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 526 241 109 45 chr5 63075196 63075416 -140010116 - Charlie2a DNA MER1_type -2621 241 8 1991 116 50 23 chr5 63075426 63075728 -140009804 - AluSg SINE Alu 0 310 1 1879 160 7 4 chr5 63075852 63076156 -140009376 + AluSx SINE Alu 2 306 0 1230 180 35 119 chr5 63076346 63076664 -140008868 + MLT1A1 LTR MaLR 5 285 -80 2347 87 0 13 chr5 63076664 63076974 -140008558 - AluY SINE Alu -5 306 1 1230 180 35 119 chr5 63076974 63077049 -140008483 + MLT1A1 LTR MaLR 285 365 0 308 222 81 20 chr5 63077122 63077221 -140008311 + L1MC4a LINE L1 5882 5986 -1822 290 274 106 43 chr5 63077257 63077280 -140008252 + L1MC4a LINE L1 5955 5975 -1833 234 0 0 0 chr5 63077280 63077306 -140008226 + (CAA)n Simple_repeat Simple_repeat 2 27 0 290 274 106 43 chr5 63077306 63077490 -140008042 + L1MC4a LINE L1 5975 6175 -1633 6197 134 10 30 chr5 63077818 63078152 -140007380 + L1MA2 LINE L1 4726 5065 -1239 2298 119 0 3 chr5 63078152 63078463 -140007069 + AluSg SINE Alu 1 310 0 6197 134 10 30 chr5 63078463 63079744 -140005788 + L1MA2 LINE L1 5065 6304 0 267 295 122 22 chr5 63079926 63080377 -140005155 + L1MC4 LINE L1 7000 7492 -550 373 282 125 34 chr5 63080425 63080808 -140004724 + L1MC4 LINE L1 7470 7887 -155 2645 109 139 108 chr5 63081162 63081802 -140003730 - MER4A LTR ERV1 -4 660 1 653 246 46 34 chr5 63082274 63082365 -140003167 - MIR SINE MIR 0 262 167 1884 189 22 6 chr5 63082365 63082724 -140002808 - MLT1A1 LTR MaLR 0 365 1 653 246 46 34 chr5 63082724 63082807 -140002725 - MIR SINE MIR -95 167 86 427 245 63 35 chr5 63082859 63083002 -140002530 - L2 LINE L2 -8 3305 3159 309 230 69 86 chr5 63083246 63083420 -140002112 - L1MC4a LINE L1 -1785 6023 5853 225 0 0 0 chr5 63083421 63083446 -140002086 + (TG)n Simple_repeat Simple_repeat 2 26 0 1745 114 92 0 chr5 63083446 63083545 -140001987 - AluSq SINE Alu -27 286 197 931 87 0 93 chr5 63083545 63083717 -140001815 - L1PA6 LINE L1 0 6154 5999 1745 114 92 0 chr5 63083717 63083879 -140001653 - AluSq SINE Alu -116 197 1 671 244 22 11 chr5 63083879 63084059 -140001473 - L1MC4a LINE L1 -1944 5864 5683 863 137 20 39 chr5 63084060 63084213 -140001319 - MER58B DNA MER1_type -1 340 191 909 85 23 0 chr5 63084226 63084356 -140001176 - L1PB1 LINE L1 -1 6150 6018 6931 59 19 0 chr5 63084365 63085365 -140000167 - L1PA7 LINE L1 -6 6148 5140 715 293 87 36 chr5 63085453 63086063 -139999469 - L1MC4a LINE L1 -834 5312 5010 207 162 0 0 chr5 63086485 63086522 -139999010 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 188 174 196 0 chr5 63087154 63087200 -139998332 + MIR SINE MIR 98 152 -110 1703 163 133 72 chr5 63087200 63087717 -139997815 + MER34C LTR ERV1 37 585 0 23 0 0 0 chr5 63089890 63089913 -139995619 + AT_rich Low_complexity Low_complexity 1 23 0 533 253 117 6 chr5 63093797 63093959 -139991573 + MER5A DNA MER1_type 3 182 -7 407 311 39 99 chr5 63096170 63096533 -139988999 - L2 LINE L2 -17 3255 2915 261 312 138 50 chr5 63096918 63097258 -139988274 - L2 LINE L2 -768 2546 2177 786 165 0 15 chr5 63097530 63097663 -139987869 + FRAM SINE Alu 27 157 -19 354 336 30 23 chr5 63097825 63097956 -139987576 + MIR SINE MIR 31 162 -100 636 293 79 58 chr5 63098223 63098602 -139986930 - LTR33A LTR ERVL -124 399 13 1788 178 21 0 chr5 63099502 63099788 -139985744 + AluJb SINE Alu 1 292 -20 1821 207 43 10 chr5 63100123 63100539 -139984993 + MER63B DNA MER1_type 4 433 -3 455 304 12 0 chr5 63101607 63101768 -139983764 + Charlie8 DNA MER1_type 71 233 -2184 2164 127 45 101 chr5 63102100 63102606 -139982926 + LTR1 LTR ERV1 49 526 -259 229 231 0 0 chr5 63102606 63102658 -139982874 + LTR30 LTR ERV1 1 52 -670 1780 101 194 169 chr5 63102662 63103226 -139982306 + LTR12 LTR ERV1 58 581 -133 1225 173 60 8 chr5 63103226 63103475 -139982057 + LTR1 LTR ERV1 523 784 -1 30 27 0 0 chr5 63104446 63104483 -139981049 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 63104615 63104646 -139980886 + AT_rich Low_complexity Low_complexity 1 31 0 2092 152 0 0 chr5 63104846 63105149 -139980383 - AluSx SINE Alu -9 303 1 374 242 23 15 chr5 63105351 63105483 -139980049 + MER103 DNA DNA 20 152 -14 920 197 86 40 chr5 63105707 63106069 -139979463 - MSTC LTR MaLR 0 428 1 234 114 0 0 chr5 63106485 63106520 -139979012 - U2 snRNA snRNA -153 35 1 1159 201 74 53 chr5 63106953 63107236 -139978296 + AluJo SINE Alu 1 289 -13 32 43 0 0 chr5 63108503 63108549 -139976983 + AT_rich Low_complexity Low_complexity 1 46 0 423 0 0 0 chr5 63109184 63109231 -139976301 + (TG)n Simple_repeat Simple_repeat 2 48 0 354 240 103 64 chr5 63110592 63110798 -139974734 + MIR SINE MIR 16 223 -39 279 0 0 0 chr5 63111460 63111491 -139974041 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 213 94 0 0 chr5 63111824 63111856 -139973676 + (CA)n Simple_repeat Simple_repeat 2 33 0 14153 132 19 16 chr5 63111857 63112452 -139973080 + Tigger1 DNA MER2_type 26 618 -1800 2010 146 3 3 chr5 63112452 63112753 -139972779 + AluJb SINE Alu 1 301 -11 14153 132 19 16 chr5 63112753 63114541 -139970991 + Tigger1 DNA MER2_type 618 2416 -2 706 191 62 136 chr5 63114549 63114926 -139970606 - MLT1A1 LTR MaLR -11 421 5 414 264 115 20 chr5 63115139 63115287 -139970245 + MSTD LTR MaLR 14 175 -221 315 281 97 54 chr5 63115713 63115898 -139969634 + MIR SINE MIR 17 209 -53 604 298 101 0 chr5 63118721 63118979 -139966553 + MER69 DNA AcHobo 48 331 -2195 784 187 24 0 chr5 63119242 63119408 -139966124 - MER96B DNA MER1_type? -238 179 10 467 316 142 22 chr5 63119409 63119726 -139965806 + L3 LINE CR1 617 971 -606 418 284 30 30 chr5 63119748 63119945 -139965587 + LTR33A LTR ERVL 8 204 -319 609 220 161 14 chr5 63119971 63120189 -139965343 + LTR33A LTR ERVL 272 521 -2 421 343 43 14 chr5 63120291 63120501 -139965031 + MIR SINE MIR 13 228 -34 294 329 206 4 chr5 63120532 63120775 -139964757 + L3 LINE CR1 1199 1490 -87 494 305 59 27 chr5 63120810 63120997 -139964535 - MIR SINE MIR -4 258 66 238 228 119 0 chr5 63121146 63121247 -139964285 - L1ME4a LINE L1 0 6121 6009 192 269 30 15 chr5 63121632 63121699 -139963833 + L2 LINE L2 3204 3271 -42 2427 81 0 0 chr5 63121935 63122243 -139963289 - AluY SINE Alu -3 308 1 502 265 71 29 chr5 63122292 63122462 -139963070 + MER5A DNA MER1_type 13 189 0 788 222 22 5 chr5 63123017 63123202 -139962330 - MER5A DNA MER1_type 0 189 2 557 298 126 64 chr5 63123381 63123787 -139961745 - L3 LINE CR1 -326 1251 821 627 173 49 98 chr5 63123811 63124036 -139961496 + L1MD2 LINE L1 6146 6359 0 613 258 99 6 chr5 63124139 63124321 -139961211 + MIR SINE MIR 56 254 -8 298 275 37 18 chr5 63124740 63124849 -139960683 - MLT2E LTR ERVL -486 142 32 196 333 28 0 chr5 63126584 63126656 -139958876 + MIR SINE MIR 119 192 -70 710 308 122 49 chr5 63127887 63128394 -139957138 + L2 LINE L2 1928 2471 -843 312 349 98 38 chr5 63128481 63128745 -139956787 - L3 LINE CR1 -420 1157 878 326 289 167 13 chr5 63128799 63128866 -139956666 + L2 LINE L2 2595 2650 -664 1659 255 99 26 chr5 63128866 63129371 -139956161 - MLT1F LTR MaLR 0 542 1 326 289 167 13 chr5 63129371 63129459 -139956073 + L2 LINE L2 2650 2774 -540 553 294 86 43 chr5 63129495 63129774 -139955758 - MLT1J2 LTR MaLR -138 312 22 29 18 6 0 chr5 63129855 63129929 -139955603 + AT_rich Low_complexity Low_complexity 1 36 0 506 318 41 23 chr5 63130990 63131210 -139954322 - MIR SINE MIR -37 225 2 451 299 7 7 chr5 63131981 63132118 -139953414 + MIR SINE MIR 113 249 -13 213 342 58 58 chr5 63132141 63132261 -139953271 + L2 LINE L2 3134 3253 -19 800 245 82 84 chr5 63132531 63133016 -139952516 - LTR33 LTR ERVL -18 503 20 272 274 20 69 chr5 63133238 63133340 -139952192 + MER91A DNA MER1_type 3 99 -97 565 244 30 105 chr5 63134340 63134672 -139950860 + MER46C DNA MER2_type 1 307 -31 441 272 100 28 chr5 63135239 63135419 -139950113 - MIR SINE MIR -67 195 3 488 218 36 73 chr5 63135988 63136153 -139949379 - MER58A DNA MER1_type -21 203 45 1923 178 0 0 chr5 63136165 63136469 -139949063 + AluJb SINE Alu 7 310 -2 617 295 55 50 chr5 63136946 63137350 -139948182 + MLT1J LTR MaLR 106 511 0 465 319 58 0 chr5 63139022 63139160 -139946372 - MER91A DNA MER1_type -44 152 7 192 289 219 26 chr5 63139149 63139263 -139946269 - MIR SINE MIR -37 225 90 * 4135 109 7 2 chr5 63139514 63140108 -139945424 - MER4A LTR ERV1 -3 597 1 386 293 111 58 chr5 63140873 63141098 -139944434 - MIR SINE MIR -6 256 20 237 376 74 26 chr5 63141358 63141547 -139943985 + MIR3 SINE MIR 11 208 0 225 300 43 0 chr5 63146604 63146674 -139938858 - LTR58 LTR ERV1 -569 110 38 218 330 25 42 chr5 63147216 63147334 -139938198 + MIR SINE MIR 18 133 -75 188 235 0 39 chr5 63147381 63147432 -139938100 + L2 LINE L2 3265 3313 0 816 139 0 0 chr5 63147773 63147888 -139937644 - FLAM_C SINE Alu -16 127 13 446 282 146 82 chr5 63148738 63149018 -139936514 - L2 LINE L2 -10 3262 2965 271 301 84 28 chr5 63149063 63149206 -139936326 - L2 LINE L2 -574 2740 2590 298 264 123 0 chr5 63149768 63149874 -139935658 + MIR SINE MIR 11 129 -133 272 364 14 0 chr5 63151214 63151354 -139934178 - HAL1b LINE L1 -775 573 432 3608 156 102 0 chr5 63151979 63152634 -139932898 + MER72 LTR ERV1 1 722 0 189 107 0 0 chr5 63152702 63152730 -139932802 + (TTC)n Simple_repeat Simple_repeat 3 30 0 182 243 0 27 chr5 63154827 63154864 -139930668 + MIR SINE MIR 20 55 -207 527 294 10 29 chr5 63155146 63155350 -139930182 - MLT1H LTR MaLR -315 234 35 271 255 208 7 chr5 63155400 63155549 -139929983 + MIR SINE MIR 81 259 -3 1354 117 0 6 chr5 63156658 63156838 -139928694 - AluSx SINE Alu -133 179 1 623 269 99 57 chr5 63157565 63157755 -139927777 - L1M4 LINE L1 -1555 4591 4411 1528 183 3 33 chr5 63157755 63158055 -139927477 + AluJb SINE Alu 1 291 -21 623 269 99 57 chr5 63158055 63158236 -139927296 - L1M4 LINE L1 -1735 4411 4204 536 278 62 70 chr5 63158331 63158687 -139926845 + MLT1J LTR MaLR 104 456 -55 234 0 0 0 chr5 63158768 63158794 -139926738 + (T)n Simple_repeat Simple_repeat 1 26 0 12912 22 3 1 chr5 63158842 63161217 -139924315 - L1HS LINE L1 0 6155 3775 269 366 14 0 chr5 63162319 63162461 -139923071 - HAL1b LINE L1 -773 575 432 3824 154 92 0 chr5 63163097 63163758 -139921774 + MER72 LTR ERV1 1 722 0 189 107 0 0 chr5 63163826 63163854 -139921678 + (TTC)n Simple_repeat Simple_repeat 3 30 0 182 243 0 27 chr5 63165951 63165988 -139919544 + MIR SINE MIR 20 55 -207 545 289 10 29 chr5 63166270 63166474 -139919058 - MLT1H LTR MaLR -315 234 35 271 255 208 7 chr5 63166524 63166673 -139918859 + MIR SINE MIR 81 259 -3 1389 117 0 0 chr5 63167782 63167961 -139917571 - AluSx SINE Alu -133 179 1 637 260 105 64 chr5 63168694 63168885 -139916647 - L1M4 LINE L1 -1555 4591 4409 1501 190 3 33 chr5 63168885 63169185 -139916347 + AluJb SINE Alu 1 291 -21 637 260 105 64 chr5 63169185 63169366 -139916166 - L1M4 LINE L1 -1737 4409 4204 547 273 62 70 chr5 63169461 63169817 -139915715 + MLT1J LTR MaLR 104 456 -55 202 232 18 0 chr5 63169876 63169932 -139915600 + T-rich Low_complexity Low_complexity 3 59 0 267 339 9 17 chr5 63170273 63170388 -139915144 + MIR SINE MIR 1 114 -148 3551 108 108 0 chr5 63171303 63171876 -139913656 - MER41B LTR ERV1 0 635 1 11668 133 33 22 chr5 63171876 63174275 -139911257 - MER41B-int LTR ERV1 0 5946 1855 1807 89 31 12 chr5 63174265 63174522 -139911010 - MER41-int LTR ERV1 -3098 2848 2587 * 1023 132 7 6 chr5 63174519 63174787 -139910745 - MER41-int LTR ERV1 -3627 2319 1988 * 843 146 98 12 chr5 63174788 63174952 -139910580 - MER41-int LTR ERV1 -4184 1762 1585 513 315 119 46 chr5 63175066 63175368 -139910164 + L3 LINE CR1 1250 1573 -4 2549 53 0 0 chr5 63175569 63175871 -139909661 + AluY SINE Alu 1 302 -9 43293 47 3 2 chr5 63176067 63177302 -139908230 + L1PA4 LINE L1 8 1240 -4915 2114 57 53 11 chr5 63177302 63177584 -139907948 + AluY SINE Alu 1 294 -17 43293 47 3 2 chr5 63177584 63182485 -139903047 + L1PA4 LINE L1 1240 6152 -3 4323 118 3 0 chr5 63183802 63184435 -139901097 - MER41B LTR ERV1 0 635 1 699 236 11 34 chr5 63184470 63184648 -139900884 - MIR SINE MIR 0 262 89 1146 192 55 4 chr5 63184648 63184919 -139900613 - L1 LINE L1 -922 5224 4940 1562 179 28 6 chr5 63184919 63185271 -139900261 + L1MA5 LINE L1 5936 6295 -5 393 303 0 0 chr5 63185299 63185398 -139900134 - MIR SINE MIR -157 105 7 295 375 30 25 chr5 63185988 63186223 -139899309 + L2 LINE L2 2522 2757 -557 197 309 62 21 chr5 63186354 63186451 -139899081 + L2 LINE L2 2944 3044 -228 2276 105 22 33 chr5 63186457 63186820 -139898712 + THE1B LTR MaLR 6 364 0 710 204 56 37 chr5 63188052 63188214 -139897318 + MER20 DNA MER1_type 54 218 -1 21 0 0 0 chr5 63191019 63191040 -139894492 + AT_rich Low_complexity Low_complexity 1 21 0 359 337 71 18 chr5 63191451 63191777 -139893755 - HsTC2 DNA Tc2 -1051 847 505 23 0 0 0 chr5 63192026 63192049 -139893483 + AT_rich Low_complexity Low_complexity 1 23 0 2551 54 0 0 chr5 63192056 63192353 -139893179 - AluY SINE Alu -14 297 1 184 29 29 29 chr5 63194580 63194614 -139890918 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 1919 128 0 0 chr5 63194673 63194939 -139890593 - AluSg SINE Alu -44 266 1 226 240 0 20 chr5 63196450 63196500 -139889032 + MIR SINE MIR 112 160 -102 219 312 101 28 chr5 63196617 63196726 -139888806 - L2 LINE L2 -8 3264 3148 2025 121 7 0 chr5 63197197 63197521 -139888011 - AluSx SINE Alu 0 326 1 764 278 16 5 chr5 63197582 63197773 -139887759 - MIR SINE MIR 0 262 70 221 364 68 11 chr5 63197766 63197854 -139887678 + MIR3 SINE MIR 14 106 -102 * 1264 188 48 34 chr5 63197992 63198284 -139887248 + AluJo SINE Alu 13 308 -4 399 193 0 0 chr5 63198309 63198392 -139887140 + GA-rich Low_complexity Low_complexity 4 86 0 28 48 0 0 chr5 63198699 63198741 -139886791 + AT_rich Low_complexity Low_complexity 1 42 0 189 171 0 0 chr5 63200199 63200234 -139885298 + CT-rich Low_complexity Low_complexity 2 36 0 1745 105 0 8 chr5 63200587 63200826 -139884706 + AluSg1 SINE Alu 50 286 -23 1097 126 51 79 chr5 63200867 63200966 -139884566 + MER2 DNA MER2_type 4 104 -241 1624 27 0 0 chr5 63200966 63201189 -139884343 + AluY SINE Alu 99 321 0 1097 126 51 79 chr5 63201189 63201302 -139884230 + MER2 DNA MER2_type 104 211 -134 498 260 24 102 chr5 63201459 63201832 -139883700 - L1MC4a LINE L1 -1769 6039 5696 713 273 39 19 chr5 63202910 63203115 -139882417 - MIR SINE MIR -6 256 48 615 291 176 21 chr5 63203138 63203512 -139882020 - MLT1J1 LTR MaLR -14 432 1 21 36 0 0 chr5 63203628 63203656 -139881876 + AT_rich Low_complexity Low_complexity 1 28 0 944 100 25 0 chr5 63203823 63203983 -139881549 + (TA)n Simple_repeat Simple_repeat 2 165 0 1933 145 3 16 chr5 63203983 63204287 -139881245 - AluJo SINE Alu -1 311 12 680 295 48 29 chr5 63205586 63205898 -139879634 - L2 LINE L2 0 3313 2996 1231 261 18 23 chr5 63206019 63206418 -139879114 + MLT2C1 LTR ERVL 1 397 0 207 332 258 12 chr5 63206635 63206969 -139878563 - L2 LINE L2 -349 2965 2550 23 54 0 0 chr5 63207001 63207038 -139878494 + AT_rich Low_complexity Low_complexity 1 37 0 2458 121 8 3 chr5 63207239 63207612 -139877920 + THE1C LTR MaLR 1 375 0 1538 191 23 57 chr5 63208124 63208511 -139877021 + MLT1B LTR MaLR 11 384 -6 4806 204 29 8 chr5 63209070 63210261 -139875271 - L1 LINE L1 -776 5370 4156 21 0 0 0 chr5 63210323 63210344 -139875188 + AT_rich Low_complexity Low_complexity 1 21 0 1955 288 44 28 chr5 63210391 63211095 -139874437 + L2 LINE L2 1118 1832 -1482 817 287 112 71 chr5 63211199 63212742 -139872790 - L1MC4 LINE L1 -927 6881 5282 2187 299 107 40 chr5 63212742 63214131 -139871401 + L2 LINE L2 1823 3308 -5 337 271 75 27 chr5 63214149 63214283 -139871249 - MIR SINE MIR -62 146 18 344 269 115 23 chr5 63215764 63215894 -139869638 - MER5A DNA MER1_type -10 179 38 198 167 0 0 chr5 63216165 63216201 -139869331 + CT-rich Low_complexity Low_complexity 1 36 0 2197 255 77 67 chr5 63216479 63217394 -139868138 - L1MEc LINE L1 -4576 1820 887 2770 7 0 0 chr5 63217394 63217692 -139867840 - AluYb8 SINE Alu 0 318 21 2197 255 77 67 chr5 63217692 63217978 -139867554 - L1MEc LINE L1 -5509 887 606 492 128 0 0 chr5 63219014 63219092 -139866440 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 198 382 48 75 chr5 63219137 63219323 -139866209 + L2 LINE L2 3004 3184 -88 311 275 55 18 chr5 63219379 63219488 -139866044 + MLT1J2 LTR MaLR 1 113 -337 236 224 12 59 chr5 63220068 63220153 -139865379 - MLT1J LTR MaLR -2 509 429 328 363 48 18 chr5 63220343 63220511 -139865021 - MIR SINE MIR -89 173 1 3670 139 51 15 chr5 63220560 63221186 -139864346 + MER51A LTR ERV1 1 640 0 2220 164 21 2 chr5 63221542 63221970 -139863562 - L1MA9 LINE L1 -5 6307 5872 23 0 0 0 chr5 63223239 63223262 -139862270 + AT_rich Low_complexity Low_complexity 1 23 0 2148 103 14 0 chr5 63223656 63223948 -139861584 - AluSp SINE Alu -17 296 1 195 162 0 0 chr5 63223979 63224016 -139861516 + (TA)n Simple_repeat Simple_repeat 2 38 0 350 338 123 0 chr5 63225340 63225494 -139860038 + MER102b DNA MER1_type 131 303 -38 * 1042 216 73 52 chr5 63225483 63225826 -139859706 - MLT1A1 LTR MaLR -12 353 4 285 279 29 0 chr5 63225912 63225980 -139859552 - MIR3 SINE MIR -49 159 90 261 200 0 0 chr5 63226102 63226157 -139859375 + MER112 DNA MER1_type 199 253 -7 211 294 39 0 chr5 63226286 63226337 -139859195 - MIR SINE MIR 0 262 210 961 185 40 0 chr5 63226491 63226691 -139858841 - MER3 DNA MER1_type 0 209 2 904 232 58 4 chr5 63227477 63227718 -139857814 + MER112 DNA MER1_type 1 254 -6 21 36 0 0 chr5 63228271 63228299 -139857233 + AT_rich Low_complexity Low_complexity 1 28 0 29 70 0 0 chr5 63228441 63228498 -139857034 + AT_rich Low_complexity Low_complexity 1 57 0 186 333 0 0 chr5 63229242 63229296 -139856236 - L2 LINE L2 -9 3304 3251 516 299 60 21 chr5 63229344 63229578 -139855954 - MIR SINE MIR -15 247 5 243 250 42 73 chr5 63229576 63229672 -139855860 - MIR SINE MIR -62 200 108 * 458 134 0 12 chr5 63229758 63229840 -139855692 + (CA)n Simple_repeat Simple_repeat 2 82 0 226 260 0 39 chr5 63231289 63231366 -139854166 + CT-rich Low_complexity Low_complexity 4 77 0 26 0 0 0 chr5 63231919 63231945 -139853587 + AT_rich Low_complexity Low_complexity 1 26 0 414 53 0 0 chr5 63232257 63232314 -139853218 + (CA)n Simple_repeat Simple_repeat 2 58 0 1006 240 140 37 chr5 63232413 63232734 -139852798 - MLT1E3 LTR MaLR -40 584 200 1043 271 26 37 chr5 63234031 63234408 -139851124 + L1M4 LINE L1 5009 5381 -765 1332 191 23 0 chr5 63234410 63234672 -139850860 - L1MCa LINE L1 -6130 296 29 215 350 39 0 chr5 63234716 63234819 -139850713 + L2 LINE L2 3192 3298 -15 270 116 0 0 chr5 63234822 63234865 -139850667 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 421 195 0 0 chr5 63235709 63235796 -139849736 + MER53 DNA DNA 1 87 -102 * 503 109 0 206 chr5 63235731 63235906 -139849626 - MER53 DNA DNA -12 177 39 194 317 0 0 chr5 63236098 63236158 -139849374 + L3b LINE CR1 1328 1387 -196 24 32 0 0 chr5 63236456 63236487 -139849045 + AT_rich Low_complexity Low_complexity 1 31 0 278 275 176 0 chr5 63236517 63236608 -139848924 + L2 LINE L2 3151 3257 -15 522 259 32 86 chr5 63237501 63237629 -139847903 - L1MC4a LINE L1 -1878 5930 5797 1079 126 37 16 chr5 63237629 63237819 -139847713 + L1PA14 LINE L1 5968 6161 0 522 259 32 86 chr5 63237819 63238003 -139847529 - L1MC4a LINE L1 -2011 5797 5635 1936 163 0 0 chr5 63238508 63238803 -139846729 + AluSx SINE Alu 1 295 -17 186 208 28 97 chr5 63239932 63240004 -139845528 + MIR SINE MIR 156 222 -40 991 218 75 4 chr5 63240036 63240343 -139845189 - MER33 DNA MER1_type -24 300 1 244 290 30 60 chr5 63240538 63240638 -139844894 + L2 LINE L2 3213 3309 -4 293 233 45 68 chr5 63241108 63241241 -139844291 - MER103 DNA DNA -3 163 34 239 308 30 11 chr5 63241313 63241423 -139844109 + MIR SINE MIR 30 141 -67 344 357 0 24 chr5 63241431 63241557 -139843975 - MER5B DNA MER1_type 0 178 56 21 36 0 0 chr5 63242008 63242036 -139843496 + AT_rich Low_complexity Low_complexity 1 28 0 1055 240 148 39 chr5 63243431 63243844 -139841688 + MLT1C LTR MaLR 6 463 -4 234 309 16 32 chr5 63244010 63244133 -139841399 + L1ME3 LINE L1 1535 1655 -4887 1323 196 37 22 chr5 63244209 63244480 -139841052 + AluJb SINE Alu 23 297 -15 255 309 40 13 chr5 63244498 63244647 -139840885 + L1PA15-16 LINE L1 2425 2577 -4272 242 315 67 22 chr5 63244665 63244843 -139840689 + L1ME3 LINE L1 2085 2270 -4555 568 99 25 0 chr5 63244850 63244931 -139840601 - AluJo SINE Alu -177 135 53 6957 50 0 0 chr5 63245128 63246366 -139839166 - L1PA5 LINE L1 -9 6145 4938 29 28 0 0 chr5 63246367 63246403 -139839129 + AT_rich Low_complexity Low_complexity 1 36 0 289 266 40 6 chr5 63246441 63246614 -139838918 + (TA)n Simple_repeat Simple_repeat 2 180 0 31 44 0 0 chr5 63246641 63246686 -139838846 + AT_rich Low_complexity Low_complexity 1 45 0 3799 269 104 56 chr5 63246701 63248822 -139836710 + L1ME3 LINE L1 2715 5012 -1632 2224 94 0 50 chr5 63248822 63249141 -139836391 - AluSc SINE Alu -6 303 1 3799 269 104 56 chr5 63249141 63249894 -139835638 + L1ME3 LINE L1 5012 5727 -917 1805 171 0 3 chr5 63249916 63250209 -139835323 + AluJb SINE Alu 1 292 -20 1353 268 115 38 chr5 63250258 63250978 -139834554 + L1ME3 LINE L1 5884 6659 -1 2562 59 0 0 chr5 63251078 63251381 -139834151 + AluY SINE Alu 1 303 -8 1092 186 33 9 chr5 63251457 63251667 -139833865 - MER20 DNA MER1_type -4 215 1 180 0 0 0 chr5 63252174 63252194 -139833338 + (TA)n Simple_repeat Simple_repeat 2 21 0 28 71 0 0 chr5 63252241 63252297 -139833235 + AT_rich Low_complexity Low_complexity 1 56 0 323 333 46 35 chr5 63252635 63252809 -139832723 + MIR SINE MIR 2 177 -85 2304 99 3 0 chr5 63252830 63253142 -139832390 + AluSp SINE Alu 1 313 0 1326 176 88 50 chr5 63253356 63253697 -139831835 - MLT1A1 LTR MaLR -7 358 5 718 194 0 0 chr5 63254088 63254212 -139831320 + FLAM_C SINE Alu 1 124 -19 238 204 0 0 chr5 63254410 63254464 -139831068 + T-rich Low_complexity Low_complexity 1 54 0 417 86 0 0 chr5 63255331 63255389 -139830143 + (TAG)n Simple_repeat Simple_repeat 2 59 0 188 200 29 0 chr5 63255485 63255520 -139830012 - MIR SINE MIR -182 80 45 23 0 0 0 chr5 63255580 63255603 -139829929 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 63255629 63255659 -139829873 + AT_rich Low_complexity Low_complexity 1 30 0 836 161 0 0 chr5 63256925 63257055 -139828477 + FLAM_C SINE Alu 1 130 -3 1979 65 40 22 chr5 63257439 63257759 -139827773 - AluY SINE Alu 0 325 1 349 257 10 30 chr5 63257810 63257911 -139827621 + MIR SINE MIR 53 151 -111 313 336 28 19 chr5 63258173 63258280 -139827252 + MIR SINE MIR 2 109 -153 342 242 172 0 chr5 63258293 63258392 -139827140 + L2 LINE L2 3195 3310 -3 584 325 55 4 chr5 63258826 63259063 -139826469 + LTR33 LTR ERVL 257 505 -16 234 0 0 0 chr5 63259878 63259904 -139825628 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 15047 31 3 0 chr5 63259904 63262464 -139823068 - L1PA3 LINE L1 -10 6145 3581 814 40 10 0 chr5 63262464 63262565 -139822967 - L1PA3 LINE L1 -4479 1667 1566 26809 46 39 2 chr5 63262572 63266001 -139819531 - L1P LINE L1 -2581 3565 13 376 381 82 34 chr5 63266393 63267063 -139818469 - L2 LINE L2 -532 2782 2081 290 302 35 26 chr5 63267158 63267274 -139818258 - MIR SINE MIR -76 132 16 2072 133 29 29 chr5 63267970 63268345 -139817187 + THE1C LTR MaLR 1 375 0 279 351 27 7 chr5 63268698 63268846 -139816686 - MIR SINE MIR -21 241 91 1460 284 109 11 chr5 63268966 63269523 -139816009 - MLT2F LTR ERVL -7 656 45 748 287 111 5 chr5 63269983 63270472 -139815060 - L1ME LINE L1 -428 5719 5173 22 35 0 0 chr5 63270640 63270669 -139814863 + AT_rich Low_complexity Low_complexity 1 29 0 1383 289 120 43 chr5 63270680 63273117 -139812415 - L1ME LINE L1 -1222 4907 2285 187 55 73 36 chr5 63273169 63273224 -139812308 + (TTATA)n Simple_repeat Simple_repeat 4 60 0 249 33 0 0 chr5 63273303 63273333 -139812199 + (TG)n Simple_repeat Simple_repeat 1 30 0 310 366 10 51 chr5 63273410 63273822 -139811710 - L1ME LINE L1 -4136 2174 1780 493 316 128 22 chr5 63273865 63274279 -139811253 - L1ME LINE L1 -4642 1668 1211 374 292 85 68 chr5 63274281 63274795 -139810737 - L1MEd LINE L1 -4943 1176 649 481 356 30 17 chr5 63275333 63275558 -139809974 + LTR67 LTR ERVL 59 286 -271 1781 208 177 23 chr5 63275558 63276401 -139809131 - LTR28 LTR ERV1 0 1020 1 352 293 113 0 chr5 63276487 63276637 -139808895 + LTR67 LTR ERVL 390 556 -1 212 237 72 93 chr5 63277178 63277275 -139808257 - MIR3 SINE MIR -25 183 89 28 48 0 0 chr5 63278035 63278077 -139807455 + AT_rich Low_complexity Low_complexity 1 42 0 2630 130 61 0 chr5 63278193 63278602 -139806930 - MER57B LTR ERV1 0 434 1 22 0 0 0 chr5 63279055 63279077 -139806455 + AT_rich Low_complexity Low_complexity 1 22 0 2429 158 21 5 chr5 63279814 63280239 -139805293 + MSTB1 LTR MaLR 1 432 0 378 0 0 0 chr5 63280802 63280844 -139804688 + (TG)n Simple_repeat Simple_repeat 2 43 0 2384 69 0 10 chr5 63281144 63281450 -139804082 - AluY SINE Alu -8 303 1 569 165 55 8 chr5 63281685 63281812 -139803720 + L1PA15 LINE L1 6024 6156 -9 26 82 0 0 chr5 63283471 63283532 -139802000 + AT_rich Low_complexity Low_complexity 1 61 0 1590 173 35 11 chr5 63283904 63284188 -139801344 + AluJb SINE Alu 5 295 -17 1732 144 72 33 chr5 63284661 63285022 -139800510 + THE1C LTR MaLR 1 375 0 25 51 0 0 chr5 63285089 63285128 -139800404 + AT_rich Low_complexity Low_complexity 1 39 0 185 339 0 0 chr5 63285224 63285289 -139800243 - L2 LINE L2 0 3313 3249 229 204 0 0 chr5 63286610 63286659 -139798873 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 30 0 0 0 chr5 63286979 63287009 -139798523 + AT_rich Low_complexity Low_complexity 1 30 0 282 292 45 11 chr5 63288148 63288237 -139797295 - MIR3 SINE MIR -3 205 114 * 598 251 99 14 chr5 63288233 63288456 -139797076 + L2 LINE L2 2273 2514 -800 453 235 35 9 chr5 63288595 63288710 -139796822 + L2 LINE L2 3176 3293 -20 2173 118 0 0 chr5 63289175 63289464 -139796068 + AluSx SINE Alu 1 289 -23 638 214 159 18 chr5 63289474 63289834 -139795698 - MLT1E1 LTR MaLR -175 479 6 5365 168 9 27 chr5 63289916 63291318 -139794214 + L1PA16 LINE L1 4779 6166 0 325 169 0 112 chr5 63291643 63291732 -139793800 - MER5B DNA MER1_type -2 176 98 328 269 78 62 chr5 63291810 63292066 -139793466 - MIR SINE MIR -2 260 1 199 248 101 55 chr5 63292258 63292367 -139793165 - L3 LINE CR1 -924 653 540 21 0 0 0 chr5 63292519 63292540 -139792992 + AT_rich Low_complexity Low_complexity 1 21 0 183 366 14 14 chr5 63292780 63292851 -139792681 + MIR SINE MIR 31 101 -107 2183 65 29 7 chr5 63292974 63293167 -139792365 - AluY SINE Alu 0 322 119 366 23 0 0 chr5 63293167 63293210 -139792322 + (TG)n Simple_repeat Simple_repeat 2 44 0 2183 65 29 7 chr5 63293210 63293332 -139792200 - AluY SINE Alu -203 119 1 382 113 16 0 chr5 63293817 63293879 -139791653 + MER53 DNA DNA 127 189 0 552 199 96 56 chr5 63296056 63296307 -139789225 - ORSL DNA AcHobo -2 273 13 220 338 45 32 chr5 63296350 63296504 -139789028 - L2 LINE L2 -177 3095 2940 25 51 0 0 chr5 63296884 63296923 -139788609 + AT_rich Low_complexity Low_complexity 1 39 0 229 357 45 18 chr5 63297868 63297980 -139787552 - L2 LINE L2 -17 3296 3182 188 320 64 64 chr5 63298379 63298551 -139786981 - L2 LINE L2 0 3313 3142 3052 72 12 0 chr5 63299108 63299509 -139786023 + L1P LINE L1 591 996 -5150 218 309 186 22 chr5 63299511 63299877 -139785655 - L2 LINE L2 -1152 2162 1737 787 286 27 30 chr5 63299893 63300155 -139785377 - MIR SINE MIR 0 262 2 189 273 36 0 chr5 63301160 63301215 -139784317 + L2 LINE L2 3257 3313 0 1986 136 3 13 chr5 63301243 63301544 -139783988 - AluJb SINE Alu -6 306 9 21 0 0 0 chr5 63302444 63302465 -139783067 + AT_rich Low_complexity Low_complexity 1 21 0 842 263 83 24 chr5 63302593 63303000 -139782532 + LTR16B LTR ERVL 3 463 -1 207 247 41 41 chr5 63303068 63303141 -139782391 + MER5A DNA MER1_type 117 189 0 1638 195 0 28 chr5 63303197 63303544 -139781988 - AluJb SINE Alu 0 312 1 203 171 0 0 chr5 63303974 63304037 -139781495 + (CAA)n Simple_repeat Simple_repeat 1 63 0 926 250 75 29 chr5 63304066 63304374 -139781158 + MLT1J LTR MaLR 153 474 -37 2329 111 0 0 chr5 63304631 63304938 -139780594 - AluSq SINE Alu -6 307 1 251 376 68 8 chr5 63305065 63305182 -139780350 - L2 LINE L2 -12 3260 3137 426 306 88 105 chr5 63305399 63305814 -139779718 - L2 LINE L2 -508 2806 2385 585 248 145 19 chr5 63305814 63306028 -139779504 + MIR SINE MIR 22 262 0 426 306 88 105 chr5 63306028 63306515 -139779017 - L2 LINE L2 -929 2385 1710 254 333 0 0 chr5 63309566 63309638 -139775894 - L2 LINE L2 -1 3312 3241 413 248 24 16 chr5 63309715 63309840 -139775692 - MER94 DNA DNA -8 126 1 342 45 0 0 chr5 63310308 63310352 -139775180 + (CA)n Simple_repeat Simple_repeat 1 44 0 202 259 17 0 chr5 63310506 63310564 -139774968 + T-rich Low_complexity Low_complexity 3 61 0 286 298 60 20 chr5 63310575 63310726 -139774806 + MLT1J1 LTR MaLR 33 189 -257 303 219 21 62 chr5 63310764 63310860 -139774672 + MLT1J2 LTR MaLR 359 450 0 23 0 0 0 chr5 63311002 63311025 -139774507 + AT_rich Low_complexity Low_complexity 1 23 0 2353 83 42 68 chr5 63311375 63311760 -139773772 + THE1C LTR MaLR 1 375 0 444 363 99 19 chr5 63311806 63312120 -139773412 - L2 LINE L2 0 3272 2934 320 250 76 22 chr5 63312859 63312951 -139772581 - L1MC4 LINE L1 -1332 6710 6614 321 247 90 0 chr5 63313024 63313113 -139772419 - MIR3 SINE MIR -1 207 111 182 271 21 0 chr5 63313340 63313388 -139772144 + L2 LINE L2 3259 3307 -6 675 267 37 0 chr5 63314988 63315175 -139770357 - MIR SINE MIR 0 262 69 21 71 0 0 chr5 63316057 63316099 -139769433 + AT_rich Low_complexity Low_complexity 1 42 0 217 290 137 48 chr5 63316711 63316835 -139768697 + MIR SINE MIR 90 224 -38 31 58 4 0 chr5 63316953 63317055 -139768477 + AT_rich Low_complexity Low_complexity 1 66 0 272 417 35 9 chr5 63317763 63317878 -139767654 + L2 LINE L2 3134 3251 -21 2468 87 0 0 chr5 63317894 63318193 -139767339 + AluSx SINE Alu 2 300 -12 1230 180 19 0 chr5 63319232 63319438 -139766094 - MER20 DNA MER1_type -4 215 6 25 51 0 0 chr5 63319453 63319492 -139766040 + AT_rich Low_complexity Low_complexity 1 39 0 270 239 195 44 chr5 63319701 63319814 -139765718 - MIR SINE MIR -104 158 29 1805 170 42 8 chr5 63319998 63320351 -139765181 - MLT1A1 LTR MaLR 0 365 1 554 301 98 19 chr5 63320616 63320872 -139764660 - L2 LINE L2 0 3313 3038 2429 87 0 0 chr5 63320879 63321179 -139764353 - AluSg SINE Alu -10 300 1 267 210 113 0 chr5 63321313 63321375 -139764157 - L2 LINE L2 -519 2795 2727 24 0 0 0 chr5 63323209 63323233 -139762299 + AT_rich Low_complexity Low_complexity 1 24 0 478 223 117 18 chr5 63323352 63323587 -139761945 - L1MC/D LINE L1 -460 5661 5526 868 161 0 14 chr5 63325269 63325412 -139760120 + FLAM_C SINE Alu 1 141 -2 23 33 0 0 chr5 63325767 63325797 -139759735 + AT_rich Low_complexity Low_complexity 1 30 0 893 305 0 4 chr5 63326004 63326250 -139759282 + MIR SINE MIR 3 247 -15 28 29 0 0 chr5 63326422 63326457 -139759075 + AT_rich Low_complexity Low_complexity 1 35 0 778 239 8 59 chr5 63326457 63326712 -139758820 - L1ME1 LINE L1 -21 6145 5904 1456 126 52 0 chr5 63326714 63326944 -139758588 - Tigger5 DNA MER2_type -1 2322 2081 476 165 22 11 chr5 63326937 63327028 -139758504 - Tigger5 DNA MER2_type -2226 97 6 * 533 212 175 90 chr5 63327034 63327504 -139758028 - L1MD1 LINE L1 -337 5905 5385 180 111 0 0 chr5 63327507 63327534 -139757998 + (TC)n Simple_repeat Simple_repeat 1 27 0 968 219 0 24 chr5 63327535 63327740 -139757792 + AluJb SINE Alu 1 200 -112 1600 179 0 31 chr5 63327747 63328196 -139757336 - AluJo SINE Alu 0 440 1 1015 222 46 60 chr5 63328196 63328611 -139756921 - L1MD1 LINE L1 -749 5397 4989 242 352 16 32 chr5 63330326 63330422 -139755110 + MIR SINE MIR 28 123 -139 2327 114 77 15 chr5 63330422 63330825 -139754707 - MSTA LTR MaLR 0 428 1 242 352 16 32 chr5 63330825 63330853 -139754679 + MIR SINE MIR 123 150 -112 21 36 0 0 chr5 63331177 63331205 -139754327 + AT_rich Low_complexity Low_complexity 1 28 0 5158 37 0 2 chr5 63331205 63331820 -139753712 - L1PA5 LINE L1 -13 6141 5528 43089 46 5 1 chr5 63332025 63338146 -139747386 - L1PA4 LINE L1 -3 6152 7 294 29 0 0 chr5 63339334 63339369 -139746163 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1676 169 15 4 chr5 63339376 63339648 -139745884 - AluSx SINE Alu -37 275 1 261 328 40 57 chr5 63339907 63340084 -139745448 + MIR SINE MIR 32 205 -57 216 347 13 0 chr5 63340279 63340354 -139745178 + MIR SINE MIR 43 118 -90 1308 271 77 30 chr5 63340459 63340928 -139744604 - LTR16C LTR ERVL 0 491 1 648 301 158 30 chr5 63340933 63341331 -139744201 + LTR16A LTR ERVL 2 450 0 369 0 0 0 chr5 63341607 63341648 -139743884 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 637 171 29 23 chr5 63341653 63341828 -139743704 + CT-rich Low_complexity Low_complexity 4 179 0 243 188 0 0 chr5 63341854 63341902 -139743630 + CT-rich Low_complexity Low_complexity 2 49 0 2191 124 0 6 chr5 63341904 63342218 -139743314 - AluSx SINE Alu 0 312 1 24 32 0 0 chr5 63342292 63342323 -139743209 + AT_rich Low_complexity Low_complexity 1 31 0 924 301 48 46 chr5 63342529 63342964 -139742568 - L2 LINE L2 0 3313 2878 235 333 9 9 chr5 63344542 63344656 -139740876 + L1ME LINE L1 5482 5595 -526 2116 99 0 3 chr5 63344757 63345069 -139740463 - AluSg SINE Alu 0 311 1 191 81 216 0 chr5 63345512 63345549 -139739983 + MIR SINE MIR 121 165 -97 752 221 46 20 chr5 63346299 63346494 -139739038 + MLT1C LTR MaLR 268 467 0 24 0 0 0 chr5 63346765 63346789 -139738743 + AT_rich Low_complexity Low_complexity 1 24 0 309 333 65 21 chr5 63347989 63348175 -139737357 + MIR3 SINE MIR 4 197 -11 21 0 0 0 chr5 63348295 63348316 -139737216 + AT_rich Low_complexity Low_complexity 1 21 0 432 228 148 63 chr5 63348316 63348573 -139736959 + MLT2E LTR ERVL 6 310 -353 527 170 121 18 chr5 63348596 63348761 -139736771 + MER53 DNA DNA 8 189 0 1010 237 164 36 chr5 63349044 63349458 -139736074 - MLT1C LTR MaLR 0 467 1 1703 153 19 48 chr5 63349614 63349928 -139735604 - AluJb SINE Alu -7 305 1 271 337 66 15 chr5 63350552 63350726 -139734806 + MIR SINE MIR 25 203 -59 182 254 62 100 chr5 63351968 63352098 -139733434 - MIR SINE MIR -48 214 90 9336 115 9 0 chr5 63352186 63353540 -139731992 - Tigger1 DNA MER2_type -6 2412 1047 693 160 46 15 chr5 63353534 63353665 -139731867 - Tigger1 DNA MER2_type -1314 1104 970 * 5584 153 41 0 chr5 63354945 63355876 -139729656 + Tigger1 DNA MER2_type 1 969 -1449 490 214 20 0 chr5 63356540 63356638 -139728894 - MLT1I LTR MaLR -5 404 305 450 305 15 0 chr5 63356740 63356871 -139728661 - MLT1I LTR MaLR -276 133 1 499 277 6 28 chr5 63357349 63357526 -139728006 + MER97c DNA MER1_type? 5 177 -913 404 349 60 28 chr5 63357860 63358144 -139727388 - L1MEc LINE L1 -5392 1004 712 21 0 0 0 chr5 63359446 63359467 -139726065 + AT_rich Low_complexity Low_complexity 1 21 0 7349 35 2 0 chr5 63359470 63360811 -139724721 - L1PA4 LINE L1 0 6155 4821 864 83 0 0 chr5 63360811 63360920 -139724612 - AluSq/x SINE Alu -199 113 5 365 263 0 30 chr5 63362416 63362515 -139723017 + L2 LINE L2 3218 3313 0 395 309 52 33 chr5 63362856 63363066 -139722466 - L2 LINE L2 -22 3291 3078 41 36 0 0 chr5 63365260 63365315 -139720217 + AT_rich Low_complexity Low_complexity 1 55 0 292 250 193 0 chr5 63365688 63365776 -139719756 + MIR SINE MIR 102 206 -56 867 261 33 14 chr5 63366051 63366266 -139719266 - MIR SINE MIR -21 241 23 310 313 0 27 chr5 63366280 63366392 -139719140 + MIR SINE MIR 109 217 -45 21 0 0 0 chr5 63367267 63367288 -139718244 + AT_rich Low_complexity Low_complexity 1 21 0 180 200 0 0 chr5 63367353 63367393 -139718139 + GA-rich Low_complexity Low_complexity 2 41 0 225 0 0 0 chr5 63367632 63367657 -139717875 + (TA)n Simple_repeat Simple_repeat 2 26 0 225 270 14 40 chr5 63368067 63368141 -139717391 + MER5C DNA MER1_type 4 75 -249 252 59 0 0 chr5 63368595 63368629 -139716903 + (CA)n Simple_repeat Simple_repeat 2 35 0 2947 99 34 78 chr5 63369167 63369691 -139715841 - L1PA14 LINE L1 -3 6158 5658 566 310 125 40 chr5 63369964 63370538 -139714994 + L2 LINE L2 2624 3254 -18 185 284 25 49 chr5 63372688 63372731 -139712801 + MER5A DNA MER1_type 93 135 -54 3667 89 25 4 chr5 63372731 63373258 -139712274 - L1PA13 LINE L1 0 6163 5626 185 284 25 49 chr5 63373258 63373295 -139712237 + MER5A DNA MER1_type 135 171 -18 23 54 0 0 chr5 63374706 63374743 -139710789 + AT_rich Low_complexity Low_complexity 1 37 0 2149 117 7 0 chr5 63375833 63376124 -139709408 + AluSx SINE Alu 1 293 -19 406 196 20 0 chr5 63377184 63377286 -139708246 + (TA)n Simple_repeat Simple_repeat 1 104 0 2182 119 0 3 chr5 63377286 63377581 -139707951 - AluSq SINE Alu -19 294 1 337 282 70 26 chr5 63377679 63377835 -139707697 + L2 LINE L2 3151 3313 0 26 30 0 0 chr5 63377858 63377891 -139707641 + AT_rich Low_complexity Low_complexity 1 33 0 2248 177 76 5 chr5 63377894 63378330 -139707202 + MLT1C LTR MaLR 1 467 0 598 329 90 29 chr5 63378628 63378938 -139706594 - L2 LINE L2 -3 3310 2982 519 345 39 63 chr5 63378938 63379031 -139706501 - L2 LINE L2 -537 2777 2683 1688 185 4 7 chr5 63379031 63379312 -139706220 + AluJb SINE Alu 5 284 -28 279 0 0 0 chr5 63379312 63379343 -139706189 + (GA)n Simple_repeat Simple_repeat 2 32 0 519 345 39 63 chr5 63379343 63379660 -139705872 - L2 LINE L2 -629 2685 2376 248 320 0 103 chr5 63380000 63380097 -139705435 - L2 LINE L2 -181 3091 3005 553 330 91 37 chr5 63380250 63380711 -139704821 - L2 LINE L2 -527 2787 2302 1924 76 3 90 chr5 63381100 63381390 -139704142 + AluSc SINE Alu 37 301 -8 2410 48 0 10 chr5 63382097 63382392 -139703140 + AluY SINE Alu 1 292 -19 221 211 0 63 chr5 63382635 63382730 -139702802 + T-rich Low_complexity Low_complexity 1 89 0 935 54 0 0 chr5 63382856 63382990 -139702542 - AluY SINE Alu 0 306 173 287 299 0 11 chr5 63383982 63384069 -139701463 + (CA)n Simple_repeat Simple_repeat 2 87 0 5074 77 1 23 chr5 63384693 63385393 -139700139 + L1PA8A LINE L1 5447 6131 0 2471 71 0 6 chr5 63385917 63386228 -139699304 + AluY SINE Alu 1 309 -2 473 311 16 33 chr5 63386498 63386681 -139698851 - MER5A DNA MER1_type 0 189 10 1776 182 99 23 chr5 63386862 63387296 -139698236 - MLT1C LTR MaLR 0 467 1 724 272 0 6 chr5 63387743 63387912 -139697620 - MER45A DNA AcHobo -7 171 4 2247 226 73 46 chr5 63388174 63388968 -139696564 - L1ME2 LINE L1 -9 6155 5335 3219 178 27 15 chr5 63388968 63389641 -139695891 - L1MC1 LINE L1 0 6333 5653 2247 226 73 46 chr5 63389641 63389694 -139695838 - L1ME2 LINE L1 -829 5335 5285 23 108 0 0 chr5 63389768 63389861 -139695671 + AT_rich Low_complexity Low_complexity 1 93 0 1519 167 15 62 chr5 63390064 63390388 -139695144 + AluJo SINE Alu 3 311 -1 1384 253 119 19 chr5 63390594 63391065 -139694467 - MLT1H LTR MaLR -18 531 14 7075 86 16 5 chr5 63391279 63392291 -139693241 + L1P3 LINE L1 1 1023 -5438 22 0 0 30 chr5 63393742 63393761 -139691771 + AT_rich Low_complexity Low_complexity 1 20 -12 2110 105 7 0 chr5 63393761 63394037 -139691495 - AluSc SINE Alu -21 288 11 22 0 0 30 chr5 63394037 63394050 -139691482 + AT_rich Low_complexity Low_complexity 20 32 0 383 301 102 21 chr5 63394696 63394882 -139690650 - MIR SINE MIR -15 247 47 4038 148 34 27 chr5 63395040 63395843 -139689689 + L1MC2 LINE L1 5514 6321 -23 206 279 228 0 chr5 63397913 63397992 -139687540 - L2 LINE L2 -1 3312 3216 198 266 62 31 chr5 63398199 63398263 -139687269 - L2 LINE L2 -18 3254 3189 194 311 0 0 chr5 63398551 63398596 -139686936 + L3 LINE CR1 1518 1562 -15 8568 169 9 19 chr5 63398711 63400990 -139684542 - L1PB1 LINE L1 0 6151 3904 2370 60 0 0 chr5 63400990 63401305 -139684227 - AluY SINE Alu 0 315 1 8568 169 9 19 chr5 63401305 63401797 -139683735 - L1PB1 LINE L1 -2247 3904 3408 389 255 0 20 chr5 63401962 63402060 -139683472 + MIR3 SINE MIR 66 161 -47 845 235 59 0 chr5 63402060 63402281 -139683251 + MER58 DNA MER1_type 2 235 -2185 270 160 0 0 chr5 63402291 63402341 -139683191 + MER58 DNA MER1_type 2371 2420 0 65 50 0 0 chr5 63402386 63402486 -139683046 + AT_rich Low_complexity Low_complexity 1 100 0 237 340 52 39 chr5 63403093 63403246 -139682286 + MER5A DNA MER1_type 35 189 0 445 326 40 35 chr5 63404966 63405193 -139680339 + MIR SINE MIR 23 250 -12 1302 213 96 22 chr5 63405717 63406083 -139679449 + MLT1D LTR MaLR 113 505 0 258 172 17 17 chr5 63406347 63406405 -139679127 - L1MC4 LINE L1 -484 7558 7501 887 231 152 16 chr5 63406421 63406797 -139678735 - L1MC4 LINE L1 -612 7430 7004 1521 210 42 14 chr5 63407141 63407575 -139677957 + Charlie4a DNA MER1_type 46 491 -17 316 370 76 33 chr5 63408003 63408214 -139677318 + MIR SINE MIR 13 232 -30 1873 139 45 3 chr5 63409009 63409297 -139676235 + AluSx SINE Alu 3 302 -10 287 234 9 19 chr5 63409328 63409435 -139676097 + (TAAA)n Simple_repeat Simple_repeat 4 109 0 406 268 94 16 chr5 63410663 63410790 -139674742 + MIR SINE MIR 34 170 -92 219 293 61 30 chr5 63410911 63411010 -139674522 - MIR SINE MIR -3 259 158 181 321 62 62 chr5 63411290 63411483 -139674049 + L3 LINE CR1 186 378 -1199 258 136 0 0 chr5 63411960 63412004 -139673528 + (A)n Simple_repeat Simple_repeat 1 44 0 365 315 112 52 chr5 63412519 63413128 -139672404 - L1M4 LINE L1 -1015 5131 4487 33 43 0 0 chr5 63414950 63414997 -139670535 + AT_rich Low_complexity Low_complexity 1 47 0 1537 186 8 79 chr5 63416122 63416503 -139669029 - MLT1B LTR MaLR -3 387 34 698 176 141 0 chr5 63416506 63416648 -139668884 - FAM SINE Alu -11 174 13 760 237 23 0 chr5 63417400 63417573 -139667959 - MER45A DNA AcHobo 0 178 2 1551 175 14 34 chr5 63419333 63419630 -139665902 + AluJb SINE Alu 1 291 -21 21 0 0 0 chr5 63420984 63421005 -139664527 + AT_rich Low_complexity Low_complexity 1 21 0 2339 117 3 0 chr5 63421123 63421432 -139664100 + AluSg SINE Alu 1 310 0 384 299 127 20 chr5 63421540 63421737 -139663795 - MIR SINE MIR -14 248 31 2054 122 3 3 chr5 63423476 63423762 -139661770 + AluSx SINE Alu 1 286 -26 372 133 0 0 chr5 63423762 63423822 -139661710 + (GGGAA)n Simple_repeat Simple_repeat 1 60 0 384 274 18 9 chr5 63424042 63424155 -139661377 + MER58A DNA MER1_type 5 118 0 26 0 0 0 chr5 63424181 63424207 -139661325 + AT_rich Low_complexity Low_complexity 1 26 0 2177 154 8 8 chr5 63424207 63424578 -139660954 - L1PB3 LINE L1 -2 6152 5782 290 234 0 121 chr5 63424589 63424713 -139660819 + MER58A DNA MER1_type 115 223 -1 180 0 0 0 chr5 63424854 63424874 -139660658 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1973 92 0 83 chr5 63424894 63425232 -139660300 - AluY SINE Alu -1 310 1 184 295 33 0 chr5 63427316 63427377 -139658155 + MIR SINE MIR 183 245 -17 760 326 19 8 chr5 63427486 63427744 -139657788 - MIR SINE MIR 0 262 2 662 240 26 19 chr5 63429357 63429511 -139656021 - MIR SINE MIR -94 168 14 238 246 0 0 chr5 63429602 63429659 -139655873 + MIR SINE MIR 185 241 -21 655 271 176 29 chr5 63430195 63430705 -139654827 + L2 LINE L2 2680 3313 0 189 365 12 0 chr5 63430700 63430785 -139654747 - MIR SINE MIR -19 243 158 * 511 212 281 0 chr5 63430793 63430939 -139654593 - L2 LINE L2 -584 2730 2544 298 288 106 59 chr5 63430915 63431085 -139654447 - MIR3 SINE MIR -23 185 8 * 29 28 0 0 chr5 63431305 63431341 -139654191 + AT_rich Low_complexity Low_complexity 1 36 0 487 300 0 8 chr5 63432699 63432829 -139652703 + MER63A DNA MER1_type 81 209 -1 294 135 0 0 chr5 63432955 63433007 -139652525 - L1MB8 LINE L1 -4 6174 6123 2099 206 85 40 chr5 63433085 63433628 -139651904 + MLT1F1 LTR MaLR 1 567 0 30 0 0 0 chr5 63434205 63434235 -139651297 + AT_rich Low_complexity Low_complexity 1 30 0 188 65 0 32 chr5 63434578 63434609 -139650923 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 279 279 15 0 chr5 63435459 63435527 -139650005 - L2 LINE L2 -217 3055 2987 266 226 0 16 chr5 63436071 63436133 -139649399 - MLT1K LTR MaLR -341 247 187 840 309 56 47 chr5 63438910 63439425 -139646107 - LTR33 LTR ERVL -1 520 1 364 267 59 59 chr5 63439454 63439641 -139645891 - MER5A DNA MER1_type 0 189 3 980 69 19 6 chr5 63439782 63439942 -139645590 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 379 216 82 10 chr5 63439999 63440096 -139645436 + MIR SINE MIR 103 206 -56 185 0 40 0 chr5 63440909 63440934 -139644598 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1527 116 0 9 chr5 63441015 63441239 -139644293 - AluSc SINE Alu -4 305 84 704 237 67 10 chr5 63441433 63441627 -139643905 + MER20 DNA MER1_type 1 205 -14 35 0 0 0 chr5 63442014 63442049 -139643483 + AT_rich Low_complexity Low_complexity 1 35 0 245 143 0 20 chr5 63442855 63442904 -139642628 + (TA)n Simple_repeat Simple_repeat 2 49 0 1188 209 50 75 chr5 63445112 63445539 -139639993 + MLT1C LTR MaLR 45 467 0 366 305 135 1 chr5 63447135 63447320 -139638212 + MIR SINE MIR 1 204 -58 250 182 239 11 chr5 63447578 63447666 -139637866 - MER3 DNA MER1_type -80 129 69 321 26 0 0 chr5 63447670 63447708 -139637824 + (CA)n Simple_repeat Simple_repeat 1 38 0 200 214 36 18 chr5 63447708 63447764 -139637768 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 30139 97 7 15 chr5 63448367 63453942 -139631590 + L1PA7 LINE L1 628 6153 -1 252 299 153 15 chr5 63454083 63454220 -139631312 - MIR SINE MIR -4 258 103 1868 208 10 10 chr5 63455410 63455800 -139629732 - MLT1B LTR MaLR 0 390 1 377 20 20 0 chr5 63456526 63456576 -139628956 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 605 312 39 5 chr5 63457627 63457832 -139627700 - MIR SINE MIR -3 259 48 298 359 120 21 chr5 63458507 63458699 -139626833 - L2 LINE L2 -88 3184 2974 734 197 27 14 chr5 63458725 63458872 -139626660 - MER5B DNA MER1_type -25 153 5 307 262 78 29 chr5 63460451 63460554 -139624978 - MIR SINE MIR -52 210 103 595 306 44 37 chr5 63460816 63461113 -139624419 - L2 LINE L2 -94 3219 2921 189 107 0 0 chr5 63461333 63461361 -139624171 + (CCCCCA)n Simple_repeat Simple_repeat 6 33 0 632 169 0 7 chr5 63461610 63461746 -139623786 + (TAGA)n Simple_repeat Simple_repeat 2 136 0 315 250 34 11 chr5 63461904 63461992 -139623540 - MIR SINE MIR -76 132 43 493 306 63 66 chr5 63462089 63462485 -139623047 + L2 LINE L2 2899 3293 -20 1670 174 74 0 chr5 63462668 63463007 -139622525 + MLT1B LTR MaLR 27 390 0 276 223 21 43 chr5 63463007 63463101 -139622431 + MIR SINE MIR 107 198 -64 3346 112 89 14 chr5 63463103 63463457 -139622075 - Tigger3(Golem) DNA MER2_type 0 3028 2610 200 35 35 0 chr5 63463457 63463486 -139622046 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 3346 112 89 14 chr5 63463486 63463723 -139621809 - Tigger3(Golem) DNA MER2_type -418 2610 2392 250 364 25 8 chr5 63513843 63513961 -139571571 - L2 LINE L2 -221 3051 2932 200 336 46 106 chr5 63513972 63514255 -139571277 + L2 LINE L2 3003 3268 -4 303 225 125 0 chr5 63514725 63514805 -139570727 - L1MC4 LINE L1 -1340 6702 6613 24 32 0 0 chr5 63514806 63514837 -139570695 + AT_rich Low_complexity Low_complexity 1 31 0 32 43 0 0 chr5 63515016 63515062 -139570470 + AT_rich Low_complexity Low_complexity 1 46 0 1529 158 3 42 chr5 63516848 63517132 -139568400 - AluJb SINE Alu 0 312 40 218 339 31 0 chr5 63517727 63517792 -139567740 + L2 LINE L2 3119 3185 -87 1909 132 0 11 chr5 63517837 63518140 -139567392 - AluSx SINE Alu 0 304 5 203 299 0 7 chr5 63518812 63518966 -139566566 + (CATA)n Simple_repeat Simple_repeat 4 156 0 289 305 0 19 chr5 63518998 63519038 -139566494 + (CA)n Simple_repeat Simple_repeat 2 41 -63 1746 179 48 20 chr5 63519038 63519390 -139566142 + MLT1A1 LTR MaLR 4 365 0 289 305 0 19 chr5 63519390 63519454 -139566078 + (CA)n Simple_repeat Simple_repeat 41 104 0 387 361 36 12 chr5 63519903 63520069 -139565463 + L3b LINE CR1 1326 1495 -88 669 266 202 38 chr5 63520944 63521170 -139564362 - L2 LINE L2 -7 3306 3119 333 0 0 0 chr5 63521170 63521207 -139564325 + (TG)n Simple_repeat Simple_repeat 1 37 0 669 266 202 38 chr5 63521207 63521483 -139564049 - L2 LINE L2 -194 3119 2718 266 247 185 0 chr5 63521953 63522034 -139563498 + MIR SINE MIR 97 192 -70 205 278 0 22 chr5 63522081 63522171 -139563361 + T-rich Low_complexity Low_complexity 6 93 0 1886 92 3 68 chr5 63522919 63523213 -139562319 - AluSc SINE Alu -30 279 5 377 300 126 16 chr5 63525942 63526132 -139559400 - MIR SINE MIR -11 251 41 1181 303 15 2 chr5 63527557 63527966 -139557566 - LTR16A LTR ERVL -12 438 25 2032 110 7 7 chr5 63528459 63528740 -139556792 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr5 63528745 63528767 -139556765 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 303 289 299 15 chr5 63528768 63528972 -139556560 - MIR SINE MIR 0 262 1 573 317 216 8 chr5 63529203 63529582 -139555950 - L2 LINE L2 -2 3311 2854 232 220 0 0 chr5 63530795 63530854 -139554678 - L1ME4a LINE L1 -2 6119 6061 629 228 41 0 chr5 63530880 63531061 -139554471 + FLAM_A SINE Alu 5 190 0 27 0 0 0 chr5 63531204 63531231 -139554301 + AT_rich Low_complexity Low_complexity 1 27 0 802 152 0 0 chr5 63532941 63533079 -139552453 + AluSp/q SINE Alu 176 313 0 2229 142 3 12 chr5 63533805 63534144 -139551388 - MER1B DNA MER1_type 0 337 2 1429 199 7 14 chr5 63534221 63534507 -139551025 - AluJo SINE Alu -22 290 7 331 291 60 8 chr5 63534551 63534668 -139550864 - MIR SINE MIR -77 185 63 231 61 0 0 chr5 63535042 63535075 -139550457 + (CTAAA)n Simple_repeat Simple_repeat 3 35 0 767 126 57 63 chr5 63535289 63535448 -139550084 + MLT1A2 LTR MaLR 1 158 -216 684 61 20 0 chr5 63535457 63535555 -139549977 + AluY SINE Alu 1 100 -211 697 290 10 19 chr5 63535765 63536107 -139549425 + AluY SINE Alu 1 339 0 330 45 0 0 chr5 63536121 63536165 -139549367 + (TC)n Simple_repeat Simple_repeat 2 45 0 921 210 5 5 chr5 63536165 63536351 -139549181 + MLT1A2 LTR MaLR 189 374 0 198 337 22 0 chr5 63537263 63537355 -139548177 - MIR SINE MIR 0 262 169 2293 96 7 0 chr5 63537419 63537720 -139547812 + AluSx SINE Alu 1 303 -9 384 253 21 0 chr5 63540112 63540207 -139545325 - MLT1K LTR MaLR 0 588 492 374 309 32 8 chr5 63540303 63540426 -139545106 + MIR SINE MIR 23 148 -114 1939 115 20 7 chr5 63541127 63541422 -139544110 + L1PA14 LINE L1 5845 6143 -18 278 232 14 0 chr5 63542003 63542072 -139543460 - MLT1G LTR MaLR 0 590 521 2329 80 0 10 chr5 63542072 63542373 -139543159 + AluSc SINE Alu 1 298 -11 479 16 0 0 chr5 63542420 63542481 -139543051 - L1PA6 LINE L1 0 6154 6094 386 223 181 0 chr5 63542650 63542744 -139542788 - MLT1H1 LTR MaLR -444 111 1 581 308 94 4 chr5 63544338 63544572 -139540960 + MIR SINE MIR 4 258 -4 1592 81 77 0 chr5 63545293 63545502 -139540030 - AluY SINE Alu -86 225 1 1750 165 0 47 chr5 63546666 63546987 -139538545 + AluSx SINE Alu 1 306 -6 21 71 0 0 chr5 63548131 63548173 -139537359 + AT_rich Low_complexity Low_complexity 1 42 0 265 233 41 0 chr5 63548837 63548910 -139536622 + HsTC2 DNA Tc2 1799 1874 -24 339 225 51 36 chr5 63549152 63549282 -139536250 - L1ME LINE L1 -458 5663 5534 229 236 0 55 chr5 63549380 63549435 -139536097 - MLT1D LTR MaLR -451 54 3 437 135 14 14 chr5 63550006 63550080 -139535452 - MER47B DNA MER2_type 0 418 345 2098 144 56 0 chr5 63550418 63550737 -139534795 - MER47B DNA MER2_type -81 337 1 208 93 47 47 chr5 63550776 63550811 -139534721 + (TATG)n Simple_repeat Simple_repeat 1 38 -5 2257 126 128 8 chr5 63550811 63551193 -139534339 + MSTA LTR MaLR 1 428 0 208 93 47 47 chr5 63551193 63551200 -139534332 + (TATG)n Simple_repeat Simple_repeat 37 43 0 238 156 0 0 chr5 63551200 63551245 -139534287 - L1MC4 LINE L1 -1340 6702 6658 23 33 0 0 chr5 63551498 63551528 -139534004 + AT_rich Low_complexity Low_complexity 1 30 0 625 36 0 12 chr5 63551751 63551834 -139533698 + L1PA2 LINE L1 6067 6148 -7 512 273 51 57 chr5 63552325 63552677 -139532855 + MER31-int LTR ERV1 3399 3748 -1188 2387 186 39 11 chr5 63552708 63553175 -139532357 + MER66B LTR ERV1 7 486 0 813 221 44 148 chr5 63553765 63554187 -139531345 + LTR37B LTR ERV1 3 363 -105 2368 81 0 13 chr5 63554187 63554495 -139531037 - AluY SINE Alu -7 304 1 813 221 44 148 chr5 63554495 63554592 -139530940 + LTR37B LTR ERV1 363 468 0 8070 127 20 24 chr5 63557871 63559129 -139526403 - HSMAR2 DNA Mariner -2 1300 46 3586 66 4 2 chr5 63559129 63559599 -139525933 - L1PA8 LINE L1 -6 6166 5696 8070 127 20 24 chr5 63559599 63559642 -139525890 - HSMAR2 DNA Mariner -1256 46 4 355 288 125 5 chr5 63560461 63560645 -139524887 - MIR SINE MIR 0 262 57 1220 283 82 3 chr5 63561314 63561703 -139523829 + LTR16C LTR ERVL 72 491 0 476 274 9 9 chr5 63562063 63562169 -139523363 + MER119 DNA MER1_type 9 114 -469 847 242 37 0 chr5 63562178 63562393 -139523139 + MER119 DNA MER1_type 361 583 0 311 172 62 0 chr5 63562650 63562714 -139522818 - MLT1D LTR MaLR 0 505 438 23122 92 4 13 chr5 63562714 63566113 -139519419 + L1P LINE L1 1947 5313 -833 6709 63 6 12 chr5 63566113 63567238 -139518294 + L1PA7 LINE L1 5144 6154 0 1556 238 57 7 chr5 63567241 63567665 -139517867 - MLT1D LTR MaLR -59 446 2 520 224 10 0 chr5 63568216 63568314 -139517218 - Tigger7 DNA MER2_type 0 2487 2389 * 1306 201 51 4 chr5 63568312 63568566 -139516966 - Tigger7 DNA MER2_type -2220 267 2 380 126 63 7 chr5 63570256 63570399 -139515133 + (TA)n Simple_repeat Simple_repeat 1 151 0 2285 253 125 78 chr5 63570421 63572304 -139513228 - L1MC5 LINE L1 -44 7917 5896 2013 133 72 20 chr5 63572304 63572650 -139512882 + THE1B LTR MaLR 1 364 0 2285 253 125 78 chr5 63572650 63572791 -139512741 - L1MC5 LINE L1 -2065 5896 5763 2043 123 16 7 chr5 63572866 63573174 -139512358 + AluSx SINE Alu 1 311 -1 725 236 113 21 chr5 63573183 63573469 -139512063 + MLT1C LTR MaLR 49 388 -117 1277 260 97 17 chr5 63573583 63574049 -139511483 - L1MC5 LINE L1 -2051 5757 5255 235 325 32 45 chr5 63575171 63575325 -139510207 + L2 LINE L2 3084 3235 -78 35 83 0 0 chr5 63575342 63575426 -139510106 + AT_rich Low_complexity Low_complexity 1 84 0 2852 210 9 46 chr5 63575438 63576115 -139509417 - MER82 DNA MER2_type -1 652 1 24 0 0 0 chr5 63578352 63578376 -139507156 + AT_rich Low_complexity Low_complexity 1 24 0 204 273 36 0 chr5 63578575 63578630 -139506902 + MIR SINE MIR 54 110 -98 302 294 73 0 chr5 63579557 63579666 -139505866 + L2 LINE L2 3155 3271 -1 375 229 34 25 chr5 63579895 63580013 -139505519 - Charlie7 DNA MER1_type -2242 370 252 815 319 159 27 chr5 63580410 63581081 -139504451 + L2 LINE L2 609 1368 -1946 636 235 7 0 chr5 63581113 63581249 -139504283 - MER45 DNA AcHobo -903 137 1 351 211 35 35 chr5 63581298 63581412 -139504120 + Charlie7 DNA MER1_type 252 365 -2247 201 304 0 0 chr5 63581952 63581998 -139503534 - L3 LINE CR1 -115 1462 1417 215 267 133 13 chr5 63583776 63583851 -139501681 + MIR SINE MIR 59 142 -120 1567 181 25 42 chr5 63583857 63584216 -139501316 + MLT1A1 LTR MaLR 1 353 -12 319 407 22 6 chr5 63584427 63584609 -139500923 - MIR3 SINE MIR -21 187 3 1834 184 33 17 chr5 63586391 63586750 -139498782 + MLT1A1 LTR MaLR 1 365 0 363 346 92 25 chr5 63587253 63587646 -139497886 + MLT1K LTR MaLR 168 586 -2 269 0 56 0 chr5 63588529 63588565 -139496967 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 691 186 42 0 chr5 63588670 63588788 -139496744 + FLAM_C SINE Alu 1 123 -20 2528 88 64 5 chr5 63588889 63589266 -139496266 + L1PA11 LINE L1 5774 6172 -2 2429 67 7 3 chr5 63589267 63589566 -139495966 - AluY SINE Alu -11 300 1 241 222 0 0 chr5 63589579 63589633 -139495899 - MLT1J LTR MaLR -359 152 99 1085 183 14 0 chr5 63589785 63589993 -139495539 + MER2 DNA MER2_type 1 211 -134 4264 194 24 2 chr5 63590027 63591684 -139493848 - L1PB4 LINE L1 -2 6856 5168 494 139 57 25 chr5 63591691 63591813 -139493719 - L1PB4 LINE L1 -4750 2099 1974 * 5162 218 19 4 chr5 63591804 63592949 -139492583 + L1M2 LINE L1 958 2119 -4730 41053 47 4 7 chr5 63593073 63599237 -139486295 - L1PA4 LINE L1 -3 6152 4 334 239 0 0 chr5 63599254 63599321 -139486211 + MER2 DNA MER2_type 279 345 0 744 327 16 36 chr5 63600159 63600544 -139484988 - HERVL LTR ERVL -3604 2050 1674 1843 168 13 58 chr5 63601026 63601408 -139484124 + MLT1A1 LTR MaLR 1 365 0 770 218 22 0 chr5 63601948 63602127 -139483405 + MLT1A1-int LTR MaLR 1553 1735 0 1448 189 56 28 chr5 63602127 63602295 -139483237 + MLT1A1 LTR MaLR 1 163 -202 306 0 0 0 chr5 63602295 63602329 -139483203 + (TC)n Simple_repeat Simple_repeat 2 35 0 1448 189 56 28 chr5 63602329 63602515 -139483017 + MLT1A1 LTR MaLR 163 365 0 1756 201 2 49 chr5 63602740 63603148 -139482384 + MLT2D LTR ERVL 12 400 -14 26 50 0 0 chr5 63603369 63603409 -139482123 + AT_rich Low_complexity Low_complexity 1 40 0 265 372 68 5 chr5 63604198 63604405 -139481127 + MLT1K LTR MaLR 147 366 -222 353 299 32 33 chr5 63604822 63604999 -139480533 + MIR SINE MIR 11 187 -67 470 292 70 22 chr5 63605039 63605224 -139480308 + MIR SINE MIR 57 250 -12 1650 193 58 46 chr5 63605370 63605424 -139480108 - MER63B DNA MER1_type -626 436 384 1482 189 39 69 chr5 63605424 63605730 -139479802 - AluJb SINE Alu -13 299 3 1650 193 58 46 chr5 63605730 63606106 -139479426 - MER63B DNA MER1_type -678 384 1 1135 244 43 10 chr5 63607758 63608061 -139477471 - MLT1A1 LTR MaLR 0 365 53 216 331 140 57 chr5 63608820 63608977 -139476555 - L2 LINE L2 -4 3268 3099 217 320 111 43 chr5 63609013 63609247 -139476285 + MIR SINE MIR 13 262 0 3003 131 15 15 chr5 63609282 63609629 -139475903 - L1MA5A LINE L1 -8 6289 5940 1805 189 0 3 chr5 63609629 63609936 -139475596 - AluJo SINE Alu -4 308 3 3003 131 15 15 chr5 63609936 63610109 -139475423 - L1MA5A LINE L1 -356 5941 5769 3930 132 28 10 chr5 63610109 63610769 -139474763 - L1PA14 LINE L1 0 6161 5482 2266 100 3 10 chr5 63610769 63611070 -139474462 - AluSx SINE Alu -13 299 1 201 39 0 0 chr5 63612840 63612866 -139472666 + (GA)n Simple_repeat Simple_repeat 2 27 0 220 316 109 40 chr5 63612921 63613095 -139472437 - MER5A DNA MER1_type -1 188 3 403 339 69 32 chr5 63613315 63613504 -139472028 + MER91A DNA MER1_type 1 196 0 277 270 0 14 chr5 63613521 63613595 -139471937 - MIR SINE MIR -109 153 81 1997 146 46 30 chr5 63614580 63614949 -139470583 + THE1C LTR MaLR 1 375 0 39621 63 6 2 chr5 63615161 63621290 -139464242 + L1PA5 LINE L1 1 6154 0 386 315 66 6 chr5 63621403 63621584 -139463948 - MIR SINE MIR -5 257 66 1635 194 185 27 chr5 63621620 63622068 -139463464 + MLT2B1 LTR ERVL 1 519 -1 539 252 168 7 chr5 63622243 63622398 -139463134 + MER5A DNA MER1_type 4 183 -6 214 338 0 14 chr5 63623422 63623496 -139462036 + MIR SINE MIR 184 256 -6 276 35 0 70 chr5 63624377 63624434 -139461098 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1948 236 43 21 chr5 63625029 63625559 -139459973 + MLT1F LTR MaLR 1 542 0 21 0 0 0 chr5 63626012 63626033 -139459499 + AT_rich Low_complexity Low_complexity 1 21 0 312 250 29 0 chr5 63626277 63626345 -139459187 + L2 LINE L2 3243 3312 -1 310 300 40 50 chr5 63626617 63626717 -139458815 + L2 LINE L2 3118 3216 -56 2058 160 97 8 chr5 63626735 63627128 -139458404 + MSTA LTR MaLR 1 428 0 2384 196 42 10 chr5 63627249 63627745 -139457787 + MER68 LTR ERV1 6 517 -45 2220 48 41 31 chr5 63627746 63628037 -139457495 - AluY SINE Alu -17 294 1 1114 311 97 12 chr5 63628098 63628840 -139456692 + L2 LINE L2 2499 3308 -5 189 74 0 0 chr5 63629081 63629108 -139456424 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 322 299 60 27 chr5 63629452 63629636 -139455896 - MER102a DNA MER1_type -3 327 138 218 221 132 0 chr5 63631261 63631329 -139454203 - MIR SINE MIR -122 140 64 418 227 8 8 chr5 63631867 63631995 -139453537 + CT-rich Low_complexity Low_complexity 2 129 0 903 246 59 114 chr5 63632177 63632771 -139452761 - MLT1G LTR MaLR -3 587 27 267 268 92 56 chr5 63633320 63633462 -139452070 + L2 LINE L2 3167 3313 0 335 314 92 41 chr5 63633595 63633866 -139451666 - L2 LINE L2 -24 3289 3005 284 334 76 26 chr5 63633945 63634264 -139451268 - L2 LINE L2 -234 3038 2694 1863 27 0 0 chr5 63634495 63634715 -139450817 - L1PA3 LINE L1 -183 5972 5753 1248 40 0 0 chr5 63634715 63634862 -139450670 + L1PA3 LINE L1 6005 6152 -3 338 316 0 0 chr5 63635527 63635625 -139449907 + MLT1D LTR MaLR 21 118 -387 25 0 0 0 chr5 63635625 63635650 -139449882 + AT_rich Low_complexity Low_complexity 1 25 0 19475 45 4 1 chr5 63635653 63638882 -139446650 - L1PA5 LINE L1 -2 6152 2925 296 133 0 0 chr5 63638882 63638927 -139446605 - L1P LINE L1 -6101 45 1 1655 185 87 8 chr5 63638930 63639287 -139446245 + MLT1D LTR MaLR 108 492 -13 1040 333 40 16 chr5 63640976 63641402 -139444130 + LTR16C LTR ERVL 1 436 -55 1222 323 66 15 chr5 63641775 63642320 -139443212 + HERV16 LTR ERVL 3792 4364 -1290 686 320 95 53 chr5 63642330 63643027 -139442505 + HERV16 LTR ERVL 4467 5192 -572 252 343 29 7 chr5 63643167 63643307 -139442225 + HERV16 LTR ERVL 4849 4991 -5 464 365 41 8 chr5 63643334 63643578 -139441954 + LTR16A LTR ERVL 22 273 -177 22 35 0 0 chr5 63644275 63644304 -139441228 + AT_rich Low_complexity Low_complexity 1 29 0 1693 191 51 30 chr5 63646221 63646593 -139438939 + MLT1B LTR MaLR 1 380 -10 561 246 31 50 chr5 63647173 63647433 -139438099 + L1MC5 LINE L1 7658 7912 -49 213 298 149 0 chr5 63650747 63650861 -139434671 - MIR SINE MIR -80 182 52 22 0 0 0 chr5 63651922 63651944 -139433588 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 63652199 63652230 -139433302 + AT_rich Low_complexity Low_complexity 1 31 0 218 191 0 0 chr5 63652880 63652922 -139432610 + (TG)n Simple_repeat Simple_repeat 1 42 0 3865 139 6 8 chr5 63653657 63654317 -139431215 - L1P4 LINE L1 -791 5355 4697 2607 80 9 0 chr5 63654318 63654667 -139430865 + L1P4 LINE L1 5379 5730 -438 1461 216 63 11 chr5 63654905 63655252 -139430280 - MLT1A1 LTR MaLR 0 365 1 436 330 51 25 chr5 63656186 63656312 -139429220 + MIR SINE MIR 21 157 -105 2019 115 7 14 chr5 63656312 63656607 -139428925 - AluSq SINE Alu -20 293 1 436 330 51 25 chr5 63656607 63656716 -139428816 + MIR SINE MIR 157 262 0 23 54 0 0 chr5 63657603 63657640 -139427892 + AT_rich Low_complexity Low_complexity 1 37 0 437 135 14 14 chr5 63657782 63657856 -139427676 - MER47B DNA MER2_type 0 418 345 2048 151 56 0 chr5 63658194 63658513 -139427019 - MER47B DNA MER2_type -81 337 1 261 212 0 61 chr5 63658553 63658587 -139426945 + (TG)n Simple_repeat Simple_repeat 1 35 -27 1804 175 128 8 chr5 63658587 63658969 -139426563 + MSTA LTR MaLR 1 428 0 261 212 0 61 chr5 63658969 63658991 -139426541 + (TG)n Simple_repeat Simple_repeat 35 55 -7 207 0 0 0 chr5 63658991 63659014 -139426518 + (CA)n Simple_repeat Simple_repeat 2 24 0 261 212 0 61 chr5 63659014 63659022 -139426510 + (TG)n Simple_repeat Simple_repeat 55 62 0 2230 101 7 0 chr5 63659487 63659783 -139425749 - AluSx SINE Alu -14 298 1 336 304 70 35 chr5 63660409 63660580 -139424952 - MER5A DNA MER1_type -12 177 1 218 31 0 31 chr5 63661044 63661076 -139424456 + (TA)n Simple_repeat Simple_repeat 1 31 0 288 312 107 28 chr5 63662213 63662428 -139423104 - L2 LINE L2 0 3313 3082 1153 77 0 0 chr5 63663045 63663188 -139422344 - AluY SINE Alu -15 296 154 2163 107 0 0 chr5 63663691 63663992 -139421540 - AluY SINE Alu 0 304 4 223 362 21 0 chr5 63664253 63664347 -139421185 + L2 LINE L2 3177 3272 0 22 70 0 0 chr5 63665099 63665142 -139420390 + AT_rich Low_complexity Low_complexity 1 43 0 345 344 48 21 chr5 63665240 63665571 -139419961 + L1MEc LINE L1 203 542 -6021 1180 222 51 11 chr5 63665655 63665930 -139419602 + MLT2C1 LTR ERVL 112 397 0 416 274 150 36 chr5 63666406 63667235 -139418297 + L1MEc LINE L1 912 1885 -4497 301 157 0 0 chr5 63667249 63667300 -139418232 + L1MEc LINE L1 2369 2419 -4144 1958 248 60 7 chr5 63667406 63668095 -139417437 + L1MEc LINE L1 2534 3258 -3124 295 156 104 0 chr5 63668167 63668263 -139417269 - L1M4 LINE L1 -1712 4434 4329 195 239 22 0 chr5 63670522 63670568 -139414964 + L2 LINE L2 3180 3226 -87 495 264 54 54 chr5 63670641 63670789 -139414743 + MER5A DNA MER1_type 29 187 -2 195 327 0 0 chr5 63671136 63671191 -139414341 + L2 LINE L2 3214 3268 -4 25 0 0 0 chr5 63671428 63671453 -139414079 + AT_rich Low_complexity Low_complexity 1 25 0 730 268 143 40 chr5 63671464 63671792 -139413740 - MLT1A1 LTR MaLR -1 364 3 279 0 0 0 chr5 63671800 63671831 -139413701 + (CA)n Simple_repeat Simple_repeat 1 31 0 784 305 63 6 chr5 63672161 63672550 -139412982 + L1M4 LINE L1 4595 5004 -1142 1259 178 9 63 chr5 63672577 63672908 -139412624 + MER33 DNA MER1_type 12 324 0 656 216 74 69 chr5 63672911 63673326 -139412206 + L1M1 LINE L1 5039 5441 -743 310 253 42 11 chr5 63673311 63673406 -139412126 + L1ME LINE L1 4816 4913 -1233 * 1664 226 20 55 chr5 63673438 63673928 -139411604 + MLT1D LTR MaLR 1 473 -32 6084 189 106 37 chr5 63673928 63674745 -139410787 + L1MC3 LINE L1 6041 6800 -985 210 37 0 0 chr5 63674745 63674772 -139410760 + (CA)n Simple_repeat Simple_repeat 2 28 0 6084 189 106 37 chr5 63674772 63675556 -139409976 + L1MC3 LINE L1 6800 7753 -32 274 195 140 0 chr5 63675561 63675640 -139409892 + L1ME LINE L1 5408 5497 -665 256 306 12 0 chr5 63676507 63676592 -139408940 + L2 LINE L2 2423 2508 -806 2081 302 129 14 chr5 63676773 63677721 -139407811 - L2 LINE L2 -383 2931 1875 506 268 14 21 chr5 63677853 63677995 -139407537 + MIR3 SINE MIR 20 160 -48 194 288 126 36 chr5 63678730 63678841 -139406691 - MIR SINE MIR -17 245 125 228 245 0 0 chr5 63679721 63679770 -139405762 + MIR SINE MIR 105 153 -109 656 340 45 0 chr5 63679921 63680168 -139405364 + MIR SINE MIR 3 260 -2 186 408 0 0 chr5 63680391 63680467 -139405065 - L2 LINE L2 -237 3076 3001 25 0 0 0 chr5 63681331 63681356 -139404176 + AT_rich Low_complexity Low_complexity 1 25 0 2408 198 35 6 chr5 63682676 63683166 -139402366 + MER34 LTR ERV1 36 539 -3 522 265 111 65 chr5 63683233 63683712 -139401820 - MER34B LTR ERV1 -64 501 1 2147 255 67 23 chr5 63686286 63686932 -139398600 + L1MDa LINE L1 14 687 -5853 7362 18 6 0 chr5 63686949 63687846 -139397686 - L1PA3 LINE L1 0 6155 5254 12703 34 1 0 chr5 63687851 63689465 -139396067 - L1P LINE L1 -798 5348 3734 2357 100 0 0 chr5 63689513 63689823 -139395709 + AluSp SINE Alu 1 310 -3 1283 176 92 3 chr5 63689840 63690175 -139395357 + L1MDa LINE L1 1003 1367 -5173 2449 111 3 8 chr5 63690307 63690676 -139394856 + THE1C LTR MaLR 6 372 -3 23 0 0 0 chr5 63690683 63690706 -139394826 + AT_rich Low_complexity Low_complexity 1 23 0 325 314 107 29 chr5 63690959 63691099 -139394433 - MER91A DNA MER1_type -40 156 6 194 300 129 57 chr5 63691284 63691337 -139394195 - MIR SINE MIR -6 256 208 962 173 11 6 chr5 63691337 63691516 -139394016 - L1MC1 LINE L1 -16 6317 6138 194 300 129 57 chr5 63691516 63691672 -139393860 - MIR SINE MIR -54 208 32 23 68 0 0 chr5 63692326 63692370 -139393162 + AT_rich Low_complexity Low_complexity 1 44 0 4952 216 35 14 chr5 63692957 63694280 -139391252 - L1 LINE L1 -1038 5108 3759 869 184 57 9 chr5 63694289 63694517 -139391015 - MER33 DNA MER1_type -85 239 1 1835 180 22 3 chr5 63694549 63694911 -139390621 + L1MB7 LINE L1 5527 5895 -289 472 68 0 0 chr5 63694912 63694971 -139390561 + AluS SINE Alu 40 98 -214 266 230 14 0 chr5 63695076 63695150 -139390382 - L1M4 LINE L1 -1233 4913 4839 514 214 67 77 chr5 63695151 63695571 -139389961 - L1M1 LINE L1 -743 5403 5039 1021 193 9 66 chr5 63695574 63695906 -139389626 - MER33 DNA MER1_type 0 324 12 365 321 19 0 chr5 63695937 63696096 -139389436 - L1M4 LINE L1 -1146 5000 4839 1602 247 138 65 chr5 63697464 63698190 -139387342 + L2 LINE L2 1889 2667 -647 616 212 169 0 chr5 63698215 63698451 -139387081 - L1MB7 LINE L1 -19 6165 5890 606 181 0 9 chr5 63698454 63698570 -139386962 - AluSp/q SINE Alu -8 305 191 1212 80 0 0 chr5 63699213 63699364 -139386168 + AluSg/x SINE Alu 156 306 -4 482 308 123 40 chr5 63701404 63702051 -139383481 + L2 LINE L2 2493 3305 -8 31 44 0 0 chr5 63702235 63702280 -139383252 + AT_rich Low_complexity Low_complexity 1 45 0 507 80 13 0 chr5 63702343 63702418 -139383114 + L1P4 LINE L1 5507 5582 -592 321 276 71 39 chr5 63703113 63703240 -139382292 + L2 LINE L2 3137 3267 -5 26 64 0 0 chr5 63703466 63703513 -139382019 + AT_rich Low_complexity Low_complexity 1 47 0 358 155 0 0 chr5 63704185 63704243 -139381289 + MIR SINE MIR 93 150 -112 2550 43 0 3 chr5 63704296 63704598 -139380934 - AluY SINE Alu -10 301 1 307 299 15 0 chr5 63704932 63704999 -139380533 - MER5A DNA MER1_type -65 124 57 24 0 0 0 chr5 63705546 63705570 -139379962 + AT_rich Low_complexity Low_complexity 1 24 0 305 330 39 62 chr5 63708180 63708438 -139377094 - MIR SINE MIR -8 254 3 311 351 63 0 chr5 63708546 63708657 -139376875 - L2 LINE L2 0 3313 3196 936 258 177 75 chr5 63709408 63709997 -139375535 - L2 LINE L2 -1101 2213 1565 2197 117 0 0 chr5 63711390 63711688 -139373844 + AluSg SINE Alu 5 302 -8 351 0 0 0 chr5 63711781 63711820 -139373712 + (CA)n Simple_repeat Simple_repeat 1 39 0 341 284 27 108 chr5 63712555 63712777 -139372755 - L2 LINE L2 -662 2652 2449 805 226 24 6 chr5 63713811 63713979 -139371553 - MER5B DNA MER1_type -7 171 1 418 236 129 14 chr5 63714275 63714415 -139371117 - MIR SINE MIR -56 206 51 393 324 7 14 chr5 63715063 63715205 -139370327 + MER5A DNA MER1_type 4 144 -45 274 360 8 16 chr5 63715094 63715219 -139370313 - MER5A DNA MER1_type -23 166 43 * 26 0 0 0 chr5 63715826 63715852 -139369680 + AT_rich Low_complexity Low_complexity 1 26 0 293 328 34 54 chr5 63715958 63716162 -139369370 + L3b LINE CR1 1203 1402 -181 858 228 0 11 chr5 63716536 63716716 -139368816 - FRAM SINE Alu -1 175 1 4458 161 55 19 chr5 63717648 63719027 -139366505 - pTR5 LTR ERV1 0 2606 1524 234 0 0 0 chr5 63719334 63719360 -139366172 + (TG)n Simple_repeat Simple_repeat 2 27 0 537 204 0 0 chr5 63719550 63719653 -139365879 + U13 snRNA snRNA 1 103 -1 22 0 0 0 chr5 63722335 63722357 -139363175 + AT_rich Low_complexity Low_complexity 1 22 0 34 0 0 0 chr5 63724089 63724123 -139361409 + AT_rich Low_complexity Low_complexity 1 34 0 234 293 165 0 chr5 63824894 63825027 -139260505 - MIR SINE MIR -43 219 65 2025 134 16 49 chr5 63825138 63825526 -139260006 - THE1C LTR MaLR 0 375 1 623 129 0 79 chr5 63825663 63825803 -139259729 + FLAM_C SINE Alu 5 133 -10 180 0 0 0 chr5 63826279 63826299 -139259233 + (TTCTG)n Simple_repeat Simple_repeat 1 20 0 7976 170 19 42 chr5 63826796 63828517 -139257015 - L1P LINE L1 -4462 1684 4 311 285 32 65 chr5 63829055 63829178 -139256354 + L2 LINE L2 3152 3270 -2 1935 163 6 10 chr5 63829199 63829512 -139256020 + AluSx SINE Alu 1 312 0 395 307 9 0 chr5 63829959 63830073 -139255459 - L2 LINE L2 -1 3312 3198 622 280 186 20 chr5 63830711 63831365 -139254167 + L2 LINE L2 2538 3308 -5 1443 171 16 45 chr5 63832737 63833047 -139252485 - MER50 LTR ERV1 -1 733 433 1068 110 27 50 chr5 63833035 63833254 -139252278 - MER50 LTR ERV1 -500 234 21 * 31 0 0 0 chr5 63833503 63833534 -139251998 + AT_rich Low_complexity Low_complexity 1 31 0 720 201 18 37 chr5 63833534 63833698 -139251834 - FRAM SINE Alu -23 153 1 232 262 159 47 chr5 63834116 63834223 -139251309 - L2 LINE L2 -13 3300 3182 504 261 22 15 chr5 63834272 63834406 -139251126 - L2 LINE L2 0 3313 3179 711 90 50 0 chr5 63834520 63834620 -139250912 - AluSq/x SINE Alu -207 105 1 193 277 60 90 chr5 63835623 63835789 -139249743 - L2 LINE L2 -206 3066 2906 572 222 42 48 chr5 63836100 63836289 -139249243 + MIR SINE MIR 69 256 -6 1234 174 26 52 chr5 63836328 63836598 -139248934 - AluJb SINE Alu -49 263 1 1514 176 3 59 chr5 63836989 63837312 -139248220 + AluJb SINE Alu 1 305 -7 582 297 101 5 chr5 63837818 63838037 -139247495 + MIR SINE MIR 23 262 0 189 350 0 0 chr5 63838087 63838147 -139247385 - L2 LINE L2 0 3272 3213 611 291 15 25 chr5 63838654 63838853 -139246679 + MIR SINE MIR 22 218 -44 1462 109 5 9 chr5 63839741 63839952 -139245580 + AluSc SINE Alu 93 302 -7 1117 257 38 23 chr5 63840217 63840563 -139244969 + MLT1I LTR MaLR 46 396 -13 24 75 0 0 chr5 63841524 63841564 -139243968 + AT_rich Low_complexity Low_complexity 1 40 0 5225 149 28 4 chr5 63841711 63843277 -139242255 - L1MA4A LINE L1 -250 6053 4442 180 0 0 0 chr5 63843277 63843297 -139242235 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5225 149 28 4 chr5 63843297 63843468 -139242064 - L1MA4A LINE L1 -1861 4442 4277 611 242 5 49 chr5 63843502 63843725 -139241807 - AluJb SINE Alu -9 303 91 2214 79 33 13 chr5 63844772 63845075 -139240457 - AluSc SINE Alu 0 309 1 22 36 0 55 chr5 63845127 63845182 -139240350 + AT_rich Low_complexity Low_complexity 1 52 0 362 331 26 20 chr5 63845734 63845885 -139239647 - MER91A DNA MER1_type 0 196 45 600 180 0 0 chr5 63845885 63845985 -139239547 - FLAM_C SINE Alu -17 126 27 489 84 56 0 chr5 63846930 63847001 -139238531 - MADE1 DNA Mariner -2 78 4 983 217 5 0 chr5 63847012 63847196 -139238336 + MIR SINE MIR 28 212 -50 1005 203 55 23 chr5 63847783 63848000 -139237532 + MER58A DNA MER1_type 1 224 0 282 292 143 42 chr5 63848453 63848621 -139236911 + MIR SINE MIR 8 192 -70 466 226 125 42 chr5 63850101 63850269 -139235263 + MER63B DNA MER1_type 1 182 -254 303 174 22 11 chr5 63850269 63850361 -139235171 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 6084 104 15 3 chr5 63850419 63851646 -139233886 - L1PA10 LINE L1 -30 6138 4900 3626 252 42 30 chr5 63851750 63853190 -139232342 - L1MEc LINE L1 -4906 1490 34 1194 164 22 113 chr5 63853501 63853819 -139231713 + MLT1A1 LTR MaLR 1 289 -76 545 196 0 107 chr5 63854083 63854410 -139231122 + MLT1A1 LTR MaLR 74 365 0 229 305 38 57 chr5 63854996 63855101 -139230431 + MIR SINE MIR 16 118 -90 2282 176 81 12 chr5 63855911 63856393 -139229139 - LTR53 LTR ERVL -4 515 1 21 71 0 0 chr5 63856916 63856958 -139228574 + AT_rich Low_complexity Low_complexity 1 42 0 315 139 19 0 chr5 63857557 63857622 -139227910 - Alu SINE Alu -248 53 2 2336 196 30 46 chr5 63857934 63858475 -139227057 - MLT1F LTR MaLR 0 542 11 389 371 84 0 chr5 63858579 63858746 -139226786 - MIR3 SINE MIR -2 206 26 813 164 0 29 chr5 63859129 63859269 -139226263 + FRAM SINE Alu 20 155 -21 23 33 0 0 chr5 63859279 63859309 -139226223 + AT_rich Low_complexity Low_complexity 1 30 0 2163 102 0 0 chr5 63859312 63859587 -139225945 + AluSg SINE Alu 1 275 -35 6032 45 7 1 chr5 63859689 63860778 -139224754 - L1P3 LINE L1 -468 5686 4595 356 59 20 0 chr5 63860775 63860826 -139224706 - L1P3 LINE L1 -6094 52 1 * 1131 241 75 13 chr5 63863151 63863458 -139222074 - MSTD LTR MaLR -67 329 4 578 297 24 20 chr5 63864457 63864706 -139220826 + MLT1J LTR MaLR 1 250 -261 1676 193 103 44 chr5 63864802 63864994 -139220538 - MER119 DNA MER1_type 0 583 404 2427 88 3 0 chr5 63864994 63865302 -139220230 - AluY SINE Alu -2 309 1 1676 193 103 44 chr5 63865302 63865606 -139219926 - MER119 DNA MER1_type -179 404 58 296 174 203 0 chr5 63866193 63866262 -139219270 + MLT1J LTR MaLR 384 466 -45 1292 182 146 4 chr5 63867069 63867322 -139218210 - AluJo SINE Alu -13 289 1 217 344 177 5 chr5 63867971 63868163 -139217369 + L2 LINE L2 3048 3272 0 737 187 26 19 chr5 63868391 63868584 -139216948 - FRAM SINE Alu 0 187 1 12098 132 11 60 chr5 63868720 63871282 -139214250 - L1P LINE L1 -1394 4752 2315 2108 111 17 0 chr5 63871445 63871733 -139213799 - AluSx SINE Alu -19 293 1 290 286 20 0 chr5 63871906 63872004 -139213528 - L1ME LINE L1 -543 5578 5479 194 330 152 27 chr5 63872662 63872774 -139212758 + L2 LINE L2 3138 3263 -9 1493 188 4 4 chr5 63872939 63873216 -139212316 + MER82 DNA MER2_type 2 278 -375 834 138 0 22 chr5 63873218 63873382 -139212150 - AluSg/x SINE Alu 0 310 176 546 253 128 23 chr5 63873684 63873949 -139211583 - LTR33 LTR ERVL -228 293 1 947 144 40 35 chr5 63874960 63875134 -139210398 - FAM SINE Alu 0 175 1 215 169 15 46 chr5 63876588 63876653 -139208879 + T-rich Low_complexity Low_complexity 3 65 0 434 226 0 0 chr5 63876798 63876904 -139208628 - MER103 DNA DNA -50 116 11 375 380 14 7 chr5 63877164 63877306 -139208226 - MIR SINE MIR -118 144 2 186 103 0 0 chr5 63877866 63877895 -139207637 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 310 219 16 0 chr5 63877902 63877966 -139207566 - L2 LINE L2 -20 3293 3229 263 348 30 30 chr5 63878008 63878143 -139207389 - L2 LINE L2 -13 3259 3125 953 243 47 81 chr5 63883896 63884279 -139201253 - MLT1F1 LTR MaLR -167 400 6 1254 257 41 48 chr5 63884293 63884709 -139200823 + MLT1K LTR MaLR 176 588 0 885 168 8 0 chr5 63884877 63885008 -139200524 - FLAM_C SINE Alu 0 133 2 890 209 107 0 chr5 63885150 63885337 -139200195 + MER20 DNA MER1_type 2 208 -11 243 328 22 30 chr5 63886175 63886309 -139199223 + MER91A DNA MER1_type 1 133 -63 304 304 44 44 chr5 63889264 63889399 -139196133 + MIR SINE MIR 20 154 -108 314 342 44 0 chr5 63889533 63889691 -139195841 - MIR SINE MIR -19 243 79 2312 81 13 3 chr5 63890873 63891171 -139194361 + AluSp SINE Alu 5 305 -8 1766 175 84 47 chr5 63891273 63891655 -139193877 + MSTD LTR MaLR 1 396 0 2187 107 0 19 chr5 63892302 63892610 -139192922 + AluSg SINE Alu 1 302 -8 1528 171 0 19 chr5 63892743 63893001 -139192531 + AluJo SINE Alu 60 312 0 1443 229 169 50 chr5 63894507 63895381 -139190151 + L1M4 LINE L1 2418 3395 -2751 1849 252 87 40 chr5 63895387 63896257 -139189275 + L1M4 LINE L1 3535 4445 -1701 624 289 66 22 chr5 63896277 63896595 -139188937 - L1M4 LINE L1 -1359 4787 4456 237 132 0 0 chr5 63896726 63896764 -139188768 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 447 229 150 96 chr5 63896889 63897129 -139188403 - MER112 DNA MER1_type 0 260 8 510 219 19 0 chr5 63897819 63897924 -139187608 - MIR SINE MIR 0 262 156 1361 204 174 30 chr5 63897931 63898527 -139187005 + MER52A LTR ERV1 1 722 -1033 432 220 43 57 chr5 63898985 63899012 -139186520 + MLT1J2 LTR MaLR 1 27 -423 1688 222 22 22 chr5 63899012 63899377 -139186155 + MLT1A1 LTR MaLR 1 365 0 432 220 43 57 chr5 63899377 63899490 -139186042 + MLT1J2 LTR MaLR 27 139 -311 300 288 63 68 chr5 63899526 63899717 -139185815 + MLT1J2 LTR MaLR 259 448 -2 812 214 0 32 chr5 63900160 63900314 -139185218 - AluJb SINE Alu -30 282 134 183 354 123 0 chr5 63900477 63900542 -139184990 + L2 LINE L2 3147 3219 -53 182 289 0 0 chr5 63901929 63901974 -139183558 - MIR SINE MIR -108 154 110 1874 130 3 23 chr5 63904882 63905181 -139180351 + AluJb SINE Alu 1 293 -19 224 123 55 0 chr5 63905252 63905325 -139180207 + (TA)n Simple_repeat Simple_repeat 2 78 0 482 278 102 11 chr5 63905373 63905560 -139179972 - MIR SINE MIR -22 240 37 557 267 139 13 chr5 63908185 63908391 -139177141 - MIR SINE MIR 0 262 34 237 319 39 78 chr5 63909872 63910104 -139175428 + L2 LINE L2 2632 2854 -460 1685 220 56 52 chr5 63910324 63910860 -139174672 + MER68 LTR ERV1 25 562 0 405 277 144 56 chr5 63911586 63911781 -139173751 - L2 LINE L2 -5 3267 3056 199 224 20 7 chr5 63912099 63912148 -139173384 - MIR SINE MIR -104 104 57 188 302 171 8 chr5 63912180 63912309 -139173223 + L2 LINE L2 3159 3308 -5 2356 161 18 77 chr5 63912324 63912778 -139172754 - MLT2B2 LTR ERVL -8 507 81 249 57 0 0 chr5 63913410 63913445 -139172087 + (CA)n Simple_repeat Simple_repeat 2 36 0 314 264 27 27 chr5 63913494 63913604 -139171928 - MER5A DNA MER1_type -1 188 79 1418 194 15 40 chr5 63914872 63915145 -139170387 + AluJo SINE Alu 1 266 -46 221 53 53 0 chr5 63915159 63915197 -139170335 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1791 129 17 124 chr5 63915693 63916103 -139169429 - MER47A DNA MER2_type 0 366 1 207 0 0 0 chr5 63917075 63917098 -139168434 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1095 91 48 0 chr5 63917102 63917267 -139168265 - AluSq SINE Alu -25 288 116 495 284 25 56 chr5 63918126 63918288 -139167244 - MIR SINE MIR -77 185 29 207 0 0 0 chr5 63918589 63918612 -139166920 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1828 118 3 83 chr5 63920135 63920474 -139165058 - AluSx SINE Alu 0 312 1 1815 95 21 4 chr5 63920895 63921137 -139164395 + L1PA6 LINE L1 5906 6151 -3 996 78 31 0 chr5 63921166 63921294 -139164238 + AluY SINE Alu 1 132 -179 319 246 100 36 chr5 63922787 63922897 -139162635 + MIR SINE MIR 6 122 -140 935 177 67 0 chr5 63923839 63924003 -139161529 - MER45A DNA AcHobo 0 178 4 28 29 0 0 chr5 63924445 63924480 -139161052 + AT_rich Low_complexity Low_complexity 1 35 0 1573 120 36 13 chr5 63925079 63925304 -139160228 + MER30 DNA MER1_type 1 230 0 432 208 84 62 chr5 63926014 63926192 -139159340 - MIR SINE MIR -1 261 80 5648 161 45 18 chr5 63926380 63927390 -139158142 + MER52A LTR ERV1 718 1755 0 251 317 12 0 chr5 63927390 63927472 -139158060 - MIR SINE MIR -113 149 67 766 240 12 74 chr5 63930111 63930353 -139155179 + MIR SINE MIR 15 241 -21 275 270 150 10 chr5 63930397 63930497 -139155035 - MIR SINE MIR -71 191 78 15104 135 18 17 chr5 63930597 63933007 -139152525 - Tigger1 DNA MER2_type -1 2417 7 450 339 164 14 chr5 63933008 63933648 -139151884 - L2 LINE L2 -1060 2254 1519 979 182 0 39 chr5 63933669 63933850 -139151682 + AluJo SINE Alu 1 174 -138 1887 192 0 0 chr5 63934060 63934372 -139151160 + AluJb SINE Alu 1 312 0 2134 153 138 11 chr5 63934492 63934870 -139150662 + MSTA LTR MaLR 1 426 -2 1037 168 4 49 chr5 63935161 63935405 -139150127 + AluSg SINE Alu 1 233 -77 365 337 66 73 chr5 63935759 63936168 -139149364 - L2 LINE L2 -19 3253 2848 2240 87 10 0 chr5 63936256 63936555 -139148977 - AluSc SINE Alu -6 303 2 191 300 280 10 chr5 63936869 63936969 -139148563 + L2 LINE L2 3146 3272 0 545 312 181 0 chr5 63937361 63937582 -139147950 + MIR SINE MIR 2 262 0 459 309 28 37 chr5 63937600 63937817 -139147715 - MIR SINE MIR -53 209 3 213 39 0 0 chr5 63938406 63938432 -139147100 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 402 278 102 17 chr5 63939095 63939271 -139146261 - MIR SINE MIR -70 192 2 191 307 34 23 chr5 63941143 63941231 -139144301 - MIR SINE MIR -170 92 4 205 176 0 0 chr5 63941453 63941487 -139144045 + (TG)n Simple_repeat Simple_repeat 1 34 0 2226 100 13 3 chr5 63941689 63941989 -139143543 + AluSx SINE Alu 1 303 -9 2286 89 7 3 chr5 63943910 63944212 -139141320 - AluSc SINE Alu -6 303 1 263 333 0 40 chr5 63944232 63944358 -139141174 - MER5A DNA MER1_type -25 164 44 2350 251 136 59 chr5 63945082 63946568 -139138964 - HAL1 LINE L1 -1 2506 892 1967 251 63 6 chr5 63946568 63947058 -139138474 - LTR40a LTR ERVL -1 518 1 2350 251 136 59 chr5 63947058 63947135 -139138397 - HAL1 LINE L1 -1615 892 822 2626 37 0 3 chr5 63947143 63947443 -139138089 + AluY SINE Alu 1 299 -12 991 180 73 30 chr5 63947472 63947656 -139137876 + MER33 DNA MER1_type 1 202 -2383 1967 96 0 8 chr5 63947656 63947962 -139137570 - AluY SINE Alu 0 329 26 991 180 73 30 chr5 63947962 63948042 -139137490 + MER33 DNA MER1_type 202 277 -47 512 235 26 120 chr5 63948194 63948428 -139137104 - MLT1E2 LTR MaLR -414 212 1 2448 134 5 32 chr5 63948445 63948819 -139136713 + THE1B LTR MaLR 1 364 0 12470 90 11 1 chr5 63948819 63950383 -139135149 + THE1B-int LTR MaLR 1 1580 0 2090 134 59 42 chr5 63950383 63950741 -139134791 + THE1B LTR MaLR 1 364 0 3008 103 133 145 chr5 63951693 63952507 -139133025 + pTR5 LTR ERV1 1312 2438 0 2232 85 0 39 chr5 63952712 63953017 -139132515 + AluY SINE Alu 1 293 -18 220 268 146 24 chr5 63953228 63953310 -139132222 - MIR3 SINE MIR -51 157 66 1743 169 24 0 chr5 63953783 63954079 -139131453 - AluJb SINE Alu -6 306 4 1418 182 191 9 chr5 63954749 63955084 -139130448 + MSTD LTR MaLR 1 396 0 4246 165 38 34 chr5 63955090 63955114 -139130418 - L1MA9 LINE L1 -60 6252 6230 2057 154 138 16 chr5 63955114 63955556 -139129976 - LTR54B LTR ERV1 -2 496 1 4246 165 38 34 chr5 63955556 63956026 -139129506 - L1MA9 LINE L1 -82 6230 5751 297 0 0 0 chr5 63956026 63956059 -139129473 + (CA)n Simple_repeat Simple_repeat 2 34 0 4246 165 38 34 chr5 63956059 63956440 -139129092 - L1MA9 LINE L1 -561 5751 5373 21 0 0 0 chr5 63956856 63956877 -139128655 + AT_rich Low_complexity Low_complexity 1 21 0 308 293 58 21 chr5 63957122 63957310 -139128222 - L1M4 LINE L1 -1322 4824 4630 325 285 37 41 chr5 63957873 63958009 -139127523 - MIR SINE MIR -71 137 30 955 227 110 32 chr5 63958651 63958933 -139126599 + MLT1C LTR MaLR 164 467 0 4460 112 56 30 chr5 63958949 63959095 -139126437 + L1PA16 LINE L1 5462 5603 -563 2310 101 0 3 chr5 63959095 63959392 -139126140 + AluSg SINE Alu 1 296 -14 4460 112 56 30 chr5 63959392 63959923 -139125609 + L1PA16 LINE L1 5603 6157 -9 1854 179 16 3 chr5 63959938 63960256 -139125276 - MER68 LTR ERV1 -240 322 1 1474 218 81 0 chr5 63960257 63960592 -139124940 - L1ME1 LINE L1 -48 6118 5757 2535 216 41 19 chr5 63960605 63961239 -139124293 - L1ME1 LINE L1 -1007 5139 4492 2253 113 0 0 chr5 63961529 63961822 -139123710 + AluSx SINE Alu 1 293 -19 559 192 50 35 chr5 63962665 63962844 -139122688 - MLT1I LTR MaLR 0 409 266 292 214 18 0 chr5 63962915 63962971 -139122561 - MLT1I LTR MaLR -290 119 63 402 252 9 18 chr5 63963140 63963251 -139122281 + FLAM_C SINE Alu 2 111 -32 247 289 41 0 chr5 63964076 63964173 -139121359 + MIR SINE MIR 118 218 -44 226 259 10 0 chr5 63965079 63965139 -139120393 + MIR SINE MIR 67 131 -77 345 47 0 0 chr5 63965211 63965254 -139120278 + (TG)n Simple_repeat Simple_repeat 2 44 0 1781 177 3 3 chr5 63965719 63966019 -139119513 + AluJb SINE Alu 13 312 0 446 285 110 22 chr5 63966209 63966528 -139119004 + L1ME4a LINE L1 5552 5898 -223 364 213 132 29 chr5 63966643 63966779 -139118753 + MIR SINE MIR 65 214 -48 337 328 15 88 chr5 63967884 63968088 -139117444 + MER5A DNA MER1_type 1 189 0 387 0 0 0 chr5 63969780 63969823 -139115709 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 3025 52 3 11 chr5 63970498 63970864 -139114668 - L1PA6 LINE L1 0 6154 5792 1649 154 23 49 chr5 63970939 63971245 -139114287 - AluJo SINE Alu -4 308 11 1367 14 0 0 chr5 63971269 63971417 -139114115 - L1PA2 LINE L1 0 6155 6008 925 249 60 0 chr5 63971428 63971661 -139113871 - MIR SINE MIR -14 248 2 361 183 0 14 chr5 63971994 63972065 -139113467 - L1 LINE L1 -2138 4008 3939 239 249 6 95 chr5 63972148 63972317 -139113215 - LTR41 LTR ERVL -36 737 584 1850 130 50 3 chr5 63972794 63973093 -139112439 - AluSq SINE Alu 0 313 1 343 265 136 15 chr5 63973105 63973237 -139112295 - LTR41 LTR ERVL -620 153 6 913 269 83 20 chr5 63973498 63973799 -139111733 - ERVL LTR ERVL -286 5478 5159 2314 91 0 3 chr5 63976594 63976891 -139108641 - AluSq SINE Alu -13 300 5 396 214 56 90 chr5 63977203 63977378 -139108154 + MIR3 SINE MIR 7 174 -34 537 238 210 32 chr5 63978083 63978331 -139107201 - L2 LINE L2 -1252 2062 1771 531 217 138 26 chr5 63979763 63979915 -139105617 - MER5A DNA MER1_type 0 189 21 246 177 10 0 chr5 63981611 63981670 -139103862 + MIR SINE MIR 99 159 -49 240 314 182 16 chr5 63981671 63981792 -139103740 - MER5A DNA MER1_type 0 189 49 242 221 10 29 chr5 63982453 63982557 -139102975 + (CATA)n Simple_repeat Simple_repeat 2 103 0 256 182 0 36 chr5 63983349 63983404 -139102128 + CT-rich Low_complexity Low_complexity 2 54 0 233 291 70 12 chr5 63984106 63984192 -139101340 + MER91C DNA MER1_type 1 91 -49 261 250 125 58 chr5 63985317 63985421 -139100111 - MIR SINE MIR -91 171 61 1521 251 103 10 chr5 63985694 63986101 -139099431 - MLT1J LTR MaLR -3 508 64 210 167 0 0 chr5 63986465 63986501 -139099031 + T-rich Low_complexity Low_complexity 2 37 0 1096 138 0 67 chr5 63986688 63986883 -139098649 + AluSg/x SINE Alu 131 312 0 448 327 18 22 chr5 63987161 63987384 -139098148 - LTR33 LTR ERVL -299 222 1 369 257 27 80 chr5 63987509 63987696 -139097836 - MIR SINE MIR -1 261 85 242 294 33 33 chr5 63987804 63987896 -139097636 - MIR SINE MIR -76 186 95 211 286 77 22 chr5 63988635 63988726 -139096806 + MIR SINE MIR 38 133 -129 514 176 123 16 chr5 63989712 63989899 -139095633 - MER5C DNA MER1_type 0 324 118 213 293 53 13 chr5 63989928 63990003 -139095529 - MER5C DNA MER1_type -205 119 42 1673 228 45 60 chr5 63990163 63990676 -139094856 - MLT1D LTR MaLR 0 505 1 188 377 28 0 chr5 63991249 63991355 -139094177 + MER5A DNA MER1_type 79 187 -2 184 293 0 0 chr5 63991397 63991438 -139094094 + MIR SINE MIR 35 75 -133 1091 180 5 36 chr5 63991483 63991705 -139093827 + MER20 DNA MER1_type 1 215 -4 400 245 151 28 chr5 63991714 63991926 -139093606 - LTR16A1 LTR ERVL -52 405 168 922 197 69 15 chr5 63992319 63992522 -139093010 - MLT1C LTR MaLR -1 466 253 2261 155 88 5 chr5 63992642 63993062 -139092470 + MER90 LTR ERV1 155 609 -5 2628 196 16 40 chr5 63993259 63993286 -139092246 - MLT2B3 LTR ERVL -15 539 513 327 49 0 0 chr5 63993286 63993327 -139092205 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2628 196 16 40 chr5 63993327 63993844 -139091688 - MLT2B3 LTR ERVL -41 513 8 319 313 36 36 chr5 63993847 63994042 -139091490 - MIR SINE MIR -21 241 47 202 258 16 0 chr5 63994982 63995044 -139090488 + L2 LINE L2 3251 3313 0 236 269 56 97 chr5 63995074 63995290 -139090242 - MLT1K LTR MaLR -191 397 191 1954 148 91 46 chr5 63995459 63995832 -139089700 - MLT1B LTR MaLR 0 390 1 2364 125 87 0 chr5 63996190 63996640 -139088892 - MER1A DNA MER1_type 0 529 2 996 203 17 8 chr5 63997777 63998013 -139087519 + L1MC3 LINE L1 7545 7782 -3 536 195 73 73 chr5 63998045 63998209 -139087323 + L1MC5 LINE L1 7763 7926 -35 253 216 7 29 chr5 63998307 63998351 -139087181 + (TA)n Simple_repeat Simple_repeat 1 44 -92 1329 194 80 21 chr5 63998351 63998676 -139086856 - MER2 DNA MER2_type 0 344 1 253 216 7 29 chr5 63998676 63998770 -139086762 + (TA)n Simple_repeat Simple_repeat 44 136 0 3784 130 61 90 chr5 63999369 64000621 -139084911 + pTR5 LTR ERV1 6 613 -101 2044 86 0 0 chr5 64000621 64000878 -139084654 + AluY SINE Alu 24 280 -31 3784 130 61 90 chr5 64000878 64000978 -139084554 + pTR5 LTR ERV1 613 714 0 192 335 63 48 chr5 64001355 64001561 -139083971 + L2 LINE L2 2844 3052 -220 450 179 0 0 chr5 64001562 64001629 -139083903 + AluJ/FLAM SINE Alu 2 68 -244 243 310 0 0 chr5 64001701 64001759 -139083773 + L2 LINE L2 3211 3268 -4 188 231 0 58 chr5 64003447 64003499 -139082033 + L2 LINE L2 3019 3067 -205 453 241 163 0 chr5 64003875 64004016 -139081516 - MER5A DNA MER1_type 0 189 26 904 266 71 75 chr5 64004018 64004485 -139081047 - MLT1J LTR MaLR -44 467 3 228 254 34 17 chr5 64005784 64005843 -139079689 - LTR38 LTR ERV1 0 556 497 * 1044 136 62 0 chr5 64005829 64006006 -139079526 + MER49 LTR ERV1 103 290 -633 828 170 52 0 chr5 64005986 64006121 -139079411 + MER49 LTR ERV1 611 752 -171 * 322 250 53 53 chr5 64006282 64006414 -139079118 + LOR1-int LTR ERV1 7365 7496 -624 182 37 37 0 chr5 64107441 64107468 -138978064 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1589 195 7 3 chr5 64107472 64107764 -138977768 - AluJo SINE Alu -19 293 1 2046 128 4 0 chr5 64107792 64108097 -138977435 + AluSx SINE Alu 2 307 0 297 253 92 0 chr5 64108659 64108746 -138976786 - MIR SINE MIR -110 152 58 1659 213 7 7 chr5 64108873 64109183 -138976349 + AluJo SINE Alu 1 310 -2 24 67 0 0 chr5 64109702 64109747 -138975785 + AT_rich Low_complexity Low_complexity 1 45 0 1742 135 21 14 chr5 64111530 64111812 -138973720 + AluSx SINE Alu 5 288 -24 2698 147 70 16 chr5 64111957 64112531 -138973001 + Tigger7 DNA MER2_type 1 2487 0 2048 113 3 36 chr5 64112698 64113007 -138972525 + AluSq SINE Alu 1 299 -14 1449 220 62 23 chr5 64113031 64113562 -138971970 + L1M4 LINE L1 2461 3012 -3134 192 40 0 0 chr5 64113736 64113761 -138971771 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2340 100 3 0 chr5 64114021 64114331 -138971201 - AluSx SINE Alu -1 311 1 555 317 101 30 chr5 64114348 64114676 -138970856 + L2 LINE L2 2555 2905 -409 219 308 96 0 chr5 64114741 64114845 -138970687 + L2 LINE L2 3197 3310 -3 596 220 18 42 chr5 64115197 64115365 -138970167 - MLT1J LTR MaLR -2 509 346 2163 128 3 3 chr5 64116623 64116928 -138968604 - AluSc SINE Alu -4 305 1 274 327 24 38 chr5 64117023 64117234 -138968298 + MLT1L LTR MaLR 1 208 -407 911 191 55 34 chr5 64117677 64117912 -138967620 - MSTB1 LTR MaLR 0 432 193 977 190 18 0 chr5 64117912 64118075 -138967457 - FAM SINE Alu -19 166 1 1174 120 27 0 chr5 64118075 64118258 -138967274 - MSTB1 LTR MaLR -244 188 1 245 29 29 0 chr5 64119452 64119486 -138966046 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1209 221 63 27 chr5 64119494 64119968 -138965564 + L1MC5 LINE L1 7411 7901 -60 285 133 0 50 chr5 64120126 64120186 -138965346 + MSTA LTR MaLR 365 421 -7 25 31 0 0 chr5 64120945 64120977 -138964555 + AT_rich Low_complexity Low_complexity 1 32 0 263 176 15 44 chr5 64121828 64121896 -138963636 - L1 LINE L1 -1215 4931 4866 * 1478 175 83 5 chr5 64121891 64122343 -138963189 + L1M3 LINE L1 5005 5480 -703 337 149 90 15 chr5 64122608 64122675 -138962857 + AluS SINE Alu 1 72 -227 514 46 15 0 chr5 64122838 64122903 -138962629 - AluSq/x SINE Alu -181 131 66 859 193 182 17 chr5 64123319 64123615 -138961917 - Charlie1 DNA MER1_type -2 2759 2415 534 261 18 45 chr5 64124529 64124751 -138960781 + LTR33 LTR ERVL 1 216 -305 279 250 83 0 chr5 64127317 64127413 -138958119 + L1MEc LINE L1 1708 1811 -4585 295 241 80 45 chr5 64127570 64127769 -138957763 + L1MEc LINE L1 1731 1936 -4460 22 0 0 0 chr5 64127858 64127880 -138957652 + AT_rich Low_complexity Low_complexity 1 22 0 463 207 95 14 chr5 64127883 64128105 -138957427 + L1MEc LINE L1 2131 2370 -4026 4054 154 28 46 chr5 64128240 64129148 -138956384 - L1 LINE L1 -2066 4080 3190 27 29 0 0 chr5 64129169 64129203 -138956329 + AT_rich Low_complexity Low_complexity 1 34 0 10044 51 2 1 chr5 64129903 64131256 -138954276 + L1P LINE L1 983 2336 -3810 7279 59 40 46 chr5 64131390 64132421 -138953111 + SVA Other Other 379 1386 0 235 265 20 69 chr5 64132421 64132515 -138953017 + L3 LINE CR1 688 778 -799 465 19 0 0 chr5 64132577 64132631 -138952901 + (CA)n Simple_repeat Simple_repeat 2 55 0 252 133 44 0 chr5 64132951 64132996 -138952536 - L1M4 LINE L1 -1207 5437 5391 703 234 86 33 chr5 64133014 64133141 -138952391 - L1M4 LINE L1 -2552 4092 3973 1893 131 76 3 chr5 64133141 64133455 -138952077 + MER1B DNA MER1_type 1 337 0 703 234 86 33 chr5 64133455 64133913 -138951619 - L1M4 LINE L1 -2671 3973 1135 1924 164 3 26 chr5 64134319 64134630 -138950902 - AluJo SINE Alu -8 304 1 659 220 53 7 chr5 64135023 64135173 -138950359 + MER5A DNA MER1_type 1 157 -32 4765 241 13 8 chr5 64135315 64136986 -138948546 - L1 LINE L1 -2887 3259 1585 909 200 47 24 chr5 64137123 64137378 -138948154 - LTR16A1 LTR ERVL -19 438 178 222 158 0 88 chr5 64137842 64137899 -138947633 - L2 LINE L2 -1 3312 3261 332 206 0 14 chr5 64137902 64137975 -138947557 + MARNA DNA Mariner 395 466 -120 255 211 282 0 chr5 64138248 64138319 -138947213 - MIR SINE MIR -16 246 156 604 255 153 0 chr5 64138340 64138497 -138947035 - MER5A DNA MER1_type 0 189 9 236 347 0 10 chr5 64138932 64139030 -138946502 - L2 LINE L2 -286 2986 2890 390 176 27 0 chr5 64139169 64139243 -138946289 - MLT1K LTR MaLR -4 584 509 218 220 25 63 chr5 64139577 64139736 -138945796 + T-rich Low_complexity Low_complexity 4 156 0 328 281 141 33 chr5 64139870 64139991 -138945541 - L2 LINE L2 0 3313 3180 1030 241 106 20 chr5 64140519 64140867 -138944665 + L2 LINE L2 2130 2507 -807 5365 136 24 12 chr5 64140982 64141998 -138943534 + L1 LINE L1 3925 4952 -1194 2017 100 11 4 chr5 64142005 64142275 -138943257 + AluSx SINE Alu 1 272 -40 216 175 0 0 chr5 64142375 64142438 -138943094 + A-rich Low_complexity Low_complexity 1 63 0 1913 72 8 0 chr5 64142939 64143175 -138942357 + AluSq SINE Alu 72 309 -4 396 331 14 7 chr5 64143728 64143870 -138941662 + MER117 DNA MER1_type 40 182 -15 181 356 0 46 chr5 64144078 64144165 -138941367 + MIR SINE MIR 9 91 -171 635 125 50 0 chr5 64144218 64144338 -138941194 + L1MA3 LINE L1 6180 6305 0 1489 128 23 36 chr5 64144687 64144992 -138940540 + MLT1A1-int LTR MaLR 1435 1735 0 2121 164 31 0 chr5 64144992 64145346 -138940186 + MLT1A1 LTR MaLR 1 365 0 482 158 21 0 chr5 64145346 64145441 -138940091 + MLT1D LTR MaLR 409 505 0 301 317 43 12 chr5 64145496 64145657 -138939875 - MLT1J LTR MaLR -343 168 3 682 217 25 25 chr5 64146021 64146224 -138939308 + L1ME1 LINE L1 5681 5883 -283 * 2389 156 250 19 chr5 64146215 64147055 -138938477 + L1MCa LINE L1 1284 2317 -4109 1799 148 13 16 chr5 64147349 64147653 -138937879 - AluY SINE Alu 0 311 9 263 233 0 0 chr5 64147931 64147991 -138937541 - L1ME3A LINE L1 -95 6075 6016 319 226 108 0 chr5 64148105 64148198 -138937334 - L1ME3A LINE L1 -208 5962 5860 429 229 78 13 chr5 64148214 64148367 -138937165 - L1ME3A LINE L1 -362 5800 5638 444 109 65 33 chr5 64148518 64148560 -138936972 - MLT2B3 LTR ERVL 0 554 515 657 69 0 0 chr5 64148560 64148647 -138936885 + (TGGA)n Simple_repeat Simple_repeat 3 89 0 444 109 65 33 chr5 64148647 64148696 -138936836 - MLT2B3 LTR ERVL -39 515 460 216 67 0 0 chr5 64148697 64148727 -138936805 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 320 45 0 0 chr5 64148727 64148771 -138936761 - MLT2B2 LTR ERVL -62 453 410 240 111 0 0 chr5 64148772 64148808 -138936724 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 330 119 0 0 chr5 64148808 64148861 -138936671 - MLT2B2 LTR ERVL -53 462 410 387 89 0 0 chr5 64148862 64148918 -138936614 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 2935 177 2 19 chr5 64148922 64149437 -138936095 - MLT2B3 LTR ERVL -46 508 3 391 176 35 12 chr5 64149453 64149538 -138935994 - MLT1D LTR MaLR -135 370 284 1466 155 19 35 chr5 64150292 64150550 -138934982 - AluJo SINE Alu -31 281 28 203 111 0 44 chr5 64151014 64151059 -138934473 + (GTTTG)n Simple_repeat Simple_repeat 4 46 0 1145 162 46 67 chr5 64151194 64151345 -138934187 - AluJo SINE Alu -34 278 134 2302 110 3 0 chr5 64151345 64151644 -138933888 - AluSx SINE Alu -12 300 1 1145 162 46 67 chr5 64151644 64151776 -138933756 - AluJo SINE Alu -178 134 1 339 229 84 12 chr5 64151778 64151861 -138933671 + MER2 DNA MER2_type 252 340 -5 824 213 6 0 chr5 64151866 64152035 -138933497 - MLT1B LTR MaLR -33 357 188 250 222 48 0 chr5 64152064 64152127 -138933405 - MSTC LTR MaLR -186 242 177 * 640 168 66 48 chr5 64152098 64152183 -138933349 - MLT1B LTR MaLR -218 172 90 1765 121 136 58 chr5 64152183 64152580 -138932952 + MSTA LTR MaLR 1 428 0 640 168 66 48 chr5 64152580 64152661 -138932871 - MLT1B LTR MaLR -300 90 3 596 205 56 6 chr5 64152664 64152825 -138932707 - L1MC5 LINE L1 -536 7425 7257 1769 164 4 0 chr5 64152855 64153129 -138932403 + AluSx SINE Alu 1 275 -37 3094 170 46 7 chr5 64153251 64154360 -138931172 + L1MA9 LINE L1 4681 5826 -486 23 62 0 0 chr5 64155159 64155191 -138930341 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 64155359 64155384 -138930148 + AT_rich Low_complexity Low_complexity 1 25 0 415 313 65 32 chr5 64155976 64156193 -138929339 + L1ME4a LINE L1 5850 6073 -48 26 30 0 0 chr5 64156230 64156263 -138929269 + AT_rich Low_complexity Low_complexity 1 33 0 682 188 205 20 chr5 64156270 64156630 -138928902 + L1MEc LINE L1 2176 2560 -3655 502 246 69 17 chr5 64156656 64156831 -138928701 + L1 LINE L1 4374 4557 -1589 743 191 129 6 chr5 64157490 64157668 -138927864 - MER3 DNA MER1_type -5 204 5 222 152 0 0 chr5 64158279 64158312 -138927220 - L2 LINE L2 -18 3254 3222 336 359 61 0 chr5 64158350 64158481 -138927051 - L2 LINE L2 0 3272 3134 389 227 65 4 chr5 64158639 64158765 -138926767 - MIR3 SINE MIR -24 184 53 565 332 75 45 chr5 64159062 64159396 -138926136 - MER115 DNA AcHobo -263 430 87 486 196 9 47 chr5 64159429 64159536 -138925996 + MER5A DNA MER1_type 1 103 -86 385 336 0 8 chr5 64161317 64161448 -138924084 - MIR SINE MIR -63 145 16 213 39 0 0 chr5 64161863 64161889 -138923643 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 206 128 26 0 chr5 64161949 64161988 -138923544 + (TA)n Simple_repeat Simple_repeat 2 41 0 878 195 55 35 chr5 64162014 64162343 -138923189 - MLT2D LTR ERVL -40 480 41 21 0 0 0 chr5 64162541 64162562 -138922970 + AT_rich Low_complexity Low_complexity 1 21 0 1690 194 33 43 chr5 64163713 64164109 -138921423 + MLT1E LTR MaLR 200 591 -2 1206 201 85 78 chr5 64165040 64165616 -138919916 + L1M4 LINE L1 2686 3265 -2881 818 238 92 27 chr5 64165669 64165963 -138919569 + L1M4 LINE L1 3638 3950 -2196 24 0 0 0 chr5 64165963 64165987 -138919545 + AT_rich Low_complexity Low_complexity 1 24 0 1280 233 7 0 chr5 64165989 64166276 -138919256 - AluSx SINE Alu -11 291 3 294 345 56 15 chr5 64166830 64167027 -138918505 - MLT1H1 LTR MaLR -287 268 64 1670 217 114 62 chr5 64167158 64167840 -138917692 - MER50 LTR ERV1 -5 729 12 27 29 0 0 chr5 64169213 64169247 -138916285 + AT_rich Low_complexity Low_complexity 1 34 0 5424 145 49 12 chr5 64169462 64170503 -138915029 + L1MC1 LINE L1 5255 6333 0 463 275 75 16 chr5 64170501 64170744 -138914788 + L1ME1 LINE L1 5876 6291 -43 * 1228 185 154 3 chr5 64170883 64171234 -138914298 - L1ME2 LINE L1 -146 6018 5615 1543 72 30 4 chr5 64171695 64171931 -138913601 + MER11B LTR ERVK 1 242 -994 328 183 0 0 chr5 64172036 64172096 -138913436 + Alu SINE Alu 236 295 -6 1413 189 60 11 chr5 64173426 64173559 -138911973 - L1PBa LINE L1 -4849 2014 1889 2789 13 0 6 chr5 64173559 64173875 -138911657 - AluYb8 SINE Alu -4 314 1 1413 189 60 11 chr5 64173875 64174111 -138911421 - L1PBa LINE L1 -4974 1889 1627 27 81 0 0 chr5 64174203 64174265 -138911267 + GC_rich Low_complexity Low_complexity 1 62 0 1178 241 56 61 chr5 64174584 64175028 -138910504 + MLT1E3 LTR MaLR 140 581 -43 1321 109 15 15 chr5 64176568 64176769 -138908763 + AluSq SINE Alu 1 201 -112 468 271 93 34 chr5 64276812 64277060 -138808472 + HAL1 LINE L1 49 318 -2189 351 204 136 29 chr5 64277060 64277163 -138808369 + MER81 DNA DNA 1 114 0 468 271 93 34 chr5 64277163 64277205 -138808327 + HAL1 LINE L1 318 356 -2151 210 289 44 22 chr5 64277596 64277686 -138807846 + MER5A DNA MER1_type 98 189 0 2925 257 82 34 chr5 64279994 64281059 -138804473 + L1MEc LINE L1 1008 2021 -4194 2298 112 0 0 chr5 64281059 64281371 -138804161 + AluSq SINE Alu 1 312 -1 2925 257 82 34 chr5 64281371 64281648 -138803884 + L1MEc LINE L1 2021 2283 -3932 198 0 0 0 chr5 64281648 64281670 -138803862 + (TA)n Simple_repeat Simple_repeat 1 22 0 2925 257 82 34 chr5 64281670 64282415 -138803117 + L1MEc LINE L1 2283 2991 -3224 2009 118 0 7 chr5 64282415 64282695 -138802837 + AluSx SINE Alu 4 281 -31 273 57 0 0 chr5 64282698 64282733 -138802799 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2925 257 82 34 chr5 64282733 64283083 -138802449 + L1MEc LINE L1 2992 3521 -2694 1559 234 216 25 chr5 64283099 64283621 -138801911 - MLT1E2 LTR MaLR -4 622 1 455 273 73 35 chr5 64283682 64283942 -138801590 + L1MEc LINE L1 3546 3815 -2400 201 209 0 0 chr5 64284062 64284129 -138801403 + A-rich Low_complexity Low_complexity 1 67 0 212 129 105 0 chr5 64284172 64284296 -138801236 + (TA)n Simple_repeat Simple_repeat 1 137 0 417 190 6 56 chr5 64284307 64284486 -138801046 + (CATATA)n Simple_repeat Simple_repeat 5 174 0 339 187 52 22 chr5 64284502 64284893 -138800639 + (TA)n Simple_repeat Simple_repeat 1 402 0 335 188 38 70 chr5 64284921 64285107 -138800425 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 * 413 159 77 24 chr5 64285066 64285236 -138800296 + (TA)n Simple_repeat Simple_repeat 2 180 0 367 142 68 45 chr5 64285287 64285463 -138800069 + (TA)n Simple_repeat Simple_repeat 1 180 0 320 248 51 73 chr5 64286189 64286231 -138799301 - MIR SINE MIR -114 148 107 195 42 0 0 chr5 64286231 64286255 -138799277 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 320 248 51 73 chr5 64286255 64286349 -138799183 - MIR SINE MIR -155 107 15 14512 188 22 7 chr5 64286857 64291463 -138794069 - L1PBa LINE L1 -792 6070 1311 2852 235 114 22 chr5 64291467 64292522 -138793010 - L1PBa LINE L1 -5706 1157 6 1200 154 69 9 chr5 64292573 64292806 -138792726 + L1MCa LINE L1 30 276 -6150 2083 132 0 23 chr5 64292806 64293109 -138792423 + AluSq SINE Alu 1 296 -17 13761 127 14 24 chr5 64293122 64295469 -138790063 + L1P LINE L1 11 2332 -3814 6854 63 6 2 chr5 64295469 64296392 -138789140 + L1PA6 LINE L1 5240 6154 0 929 186 58 9 chr5 64296392 64296618 -138788914 + L1MCa LINE L1 268 504 -5922 242 259 0 0 chr5 64296644 64296702 -138788830 + MIR SINE MIR 161 218 -44 261 0 0 0 chr5 64297385 64297414 -138788118 + (TG)n Simple_repeat Simple_repeat 2 30 0 1356 167 29 51 chr5 64297414 64297726 -138787806 - L1ME LINE L1 -497 5669 5365 7186 168 4 7 chr5 64297944 64299678 -138785854 - L1PA13 LINE L1 0 6163 4425 306 0 0 0 chr5 64299678 64299712 -138785820 + (TG)n Simple_repeat Simple_repeat 2 35 0 * 435 38 0 0 chr5 64299711 64299764 -138785768 + (TA)n Simple_repeat Simple_repeat 1 53 0 7186 168 4 7 chr5 64299712 64300134 -138785398 - L1PA13 LINE L1 -1738 4425 4031 509 309 70 23 chr5 64300587 64300843 -138784689 + L3 LINE CR1 637 904 -673 309 371 39 27 chr5 64300875 64301134 -138784398 + L3 LINE CR1 1023 1284 -293 225 282 64 64 chr5 64301179 64301289 -138784243 + L3 LINE CR1 1463 1572 -5 1572 208 30 12 chr5 64301952 64302288 -138783244 - MER2 DNA MER2_type -1 343 2 309 26 0 0 chr5 64303162 64303200 -138782332 + (CA)n Simple_repeat Simple_repeat 2 39 0 1035 191 20 0 chr5 64303369 64303568 -138781964 + MER3 DNA MER1_type 2 204 -5 530 264 57 21 chr5 64303791 64303984 -138781548 - MIR SINE MIR -27 235 36 798 227 31 21 chr5 64304065 64304259 -138781273 + MIR SINE MIR 3 198 -64 21 0 0 0 chr5 64304295 64304316 -138781216 + AT_rich Low_complexity Low_complexity 1 21 0 215 349 23 0 chr5 64305346 64305432 -138780100 + MIR SINE MIR 57 144 -118 22 35 0 0 chr5 64306961 64306990 -138778542 + AT_rich Low_complexity Low_complexity 1 29 0 434 237 149 57 chr5 64307725 64307919 -138777613 - MIR SINE MIR -4 258 47 345 295 53 0 chr5 64308512 64308607 -138776925 - MIR SINE MIR -68 140 41 2254 124 0 0 chr5 64308757 64309064 -138776468 - AluSx SINE Alu -5 307 1 1746 178 9 15 chr5 64309290 64309622 -138775910 - MER74A LTR ERVL -215 343 14 204 239 87 0 chr5 64309788 64309834 -138775698 - MIR3 SINE MIR -29 179 130 504 271 108 42 chr5 64309841 64310081 -138775451 - MIR SINE MIR 0 262 7 187 363 26 18 chr5 64310835 64310948 -138774584 - L2 LINE L2 -31 3282 3169 512 301 105 13 chr5 64311002 64311231 -138774301 + MIR SINE MIR 7 256 -6 348 255 59 10 chr5 64311289 64311391 -138774141 - L2 LINE L2 -5 3308 3202 270 207 41 122 chr5 64311614 64311805 -138773727 - MER69 DNA AcHobo 0 2526 2 386 192 0 14 chr5 64311978 64312051 -138773481 + MIR SINE MIR 78 149 -59 827 302 25 4 chr5 64312099 64312341 -138773191 - MIR SINE MIR -12 250 4 296 303 97 36 chr5 64312357 64312522 -138773010 - MIR SINE MIR -9 253 79 2458 81 0 0 chr5 64312766 64313062 -138772470 + AluSg SINE Alu 1 296 -14 942 285 20 8 chr5 64313695 64313941 -138771591 + MIR SINE MIR 14 262 0 1390 7 0 0 chr5 64314538 64314691 -138770841 + AluYb8 SINE Alu 166 318 0 2336 82 0 7 chr5 64315050 64315355 -138770177 + AluY SINE Alu 1 303 -8 1078 261 88 26 chr5 64315471 64315924 -138769608 - LTR33 LTR ERVL -40 481 1 848 163 0 15 chr5 64316083 64316218 -138769314 + FLAM_C SINE Alu 1 133 0 34 0 0 0 chr5 64316236 64316270 -138769262 + AT_rich Low_complexity Low_complexity 1 34 0 209 254 18 0 chr5 64316568 64316623 -138768909 - L2 LINE L2 -11 3261 3206 2782 182 41 6 chr5 64316693 64317232 -138768300 - MER89 LTR ERV1 -1 558 1 248 250 80 23 chr5 64317314 64317402 -138768130 + MIR SINE MIR 78 170 -92 1934 196 70 0 chr5 64317470 64317954 -138767578 - Charlie1b DNA MER1_type -5 518 1 462 297 7 39 chr5 64319475 64319630 -138765902 + MER5A DNA MER1_type 9 158 -31 322 319 49 35 chr5 64319506 64319650 -138765882 - MER5A DNA MER1_type -26 163 18 * 254 293 107 29 chr5 64320809 64320949 -138764583 + L2 LINE L2 3163 3313 0 186 40 0 0 chr5 64321015 64321027 -138764505 + (TTTG)n Simple_repeat Simple_repeat 4 15 -13 2308 82 0 30 chr5 64321027 64321332 -138764200 + AluY SINE Alu 1 296 -15 186 40 0 0 chr5 64321332 64321344 -138764188 + (TTTG)n Simple_repeat Simple_repeat 14 28 0 734 306 74 0 chr5 64321514 64321756 -138763776 + MIR SINE MIR 3 262 0 254 178 0 0 chr5 64321935 64321980 -138763552 + MER69 DNA AcHobo 2475 2519 -7 342 356 79 15 chr5 64322364 64322566 -138762966 + L3b LINE CR1 1285 1499 -84 21 71 0 0 chr5 64324252 64324294 -138761238 + AT_rich Low_complexity Low_complexity 1 42 0 223 333 0 0 chr5 64324483 64324555 -138760977 + CT-rich Low_complexity Low_complexity 2 73 0 275 271 231 6 chr5 64324888 64325213 -138760319 - L1ME4a LINE L1 -15 6106 5709 1874 178 11 8 chr5 64326511 64326877 -138758655 - MLT1A2 LTR MaLR 0 374 8 361 186 31 72 chr5 64329141 64329238 -138756294 + MIR SINE MIR 89 181 -81 231 363 35 80 chr5 64329370 64329571 -138755961 - MIR3 SINE MIR -2 206 15 1029 157 0 13 chr5 64330705 64330864 -138754668 + AluSg/x SINE Alu 131 287 -23 2037 124 7 0 chr5 64331008 64331299 -138754233 - AluSx SINE Alu -19 293 1 535 305 112 19 chr5 64331395 64331625 -138753907 + MIR SINE MIR 7 239 -23 24 0 0 0 chr5 64331912 64331936 -138753596 + AT_rich Low_complexity Low_complexity 1 24 0 272 273 7 93 chr5 64332874 64333024 -138752508 - L2 LINE L2 -212 3060 2924 260 310 103 79 chr5 64333353 64333556 -138751976 + L2 LINE L2 3056 3263 -9 2151 108 16 47 chr5 64334363 64334750 -138750782 - THE1C LTR MaLR 0 375 1 279 400 15 0 chr5 64335191 64335321 -138750211 + MIR3 SINE MIR 45 176 -32 199 364 99 25 chr5 64335478 64335599 -138749933 - L2 LINE L2 0 3272 3143 237 192 96 0 chr5 64335945 64336018 -138749514 - MLT1J2 LTR MaLR -21 429 350 266 272 12 0 chr5 64336179 64336260 -138749272 - MLT1J2 LTR MaLR -300 150 69 426 308 10 0 chr5 64338823 64338927 -138746605 - L2 LINE L2 0 3272 3168 1200 186 84 46 chr5 64338937 64339260 -138746272 + MER2 DNA MER2_type 11 345 0 2083 65 0 11 chr5 64340172 64340448 -138745084 - L1PA7 LINE L1 -3 6151 5879 3442 48 0 0 chr5 64340448 64340882 -138744650 + L1PA7 LINE L1 5445 5878 -276 193 98 49 0 chr5 64341865 64341906 -138743626 + CT-rich Low_complexity Low_complexity 1 43 0 450 251 132 36 chr5 64342011 64342178 -138743354 - L2 LINE L2 0 3313 3131 2458 27 41 7 chr5 64342987 64343282 -138742250 - AluY SINE Alu -4 307 3 334 303 50 35 chr5 64343286 64343484 -138742048 + L1M4 LINE L1 2211 2411 -3735 1177 130 14 18 chr5 64343488 64343711 -138741821 + L1MA7 LINE L1 6065 6286 -5 24 0 0 0 chr5 64343712 64343736 -138741796 + AT_rich Low_complexity Low_complexity 1 24 0 4141 112 0 8 chr5 64343979 64344598 -138740934 + L1PB1 LINE L1 5538 6151 0 645 347 16 15 chr5 64344600 64344952 -138740580 - L2 LINE L2 -249 3064 2711 372 352 55 20 chr5 64345307 64345506 -138740026 - MIR SINE MIR -22 240 35 639 51 0 0 chr5 64345541 64345620 -138739912 - L1P LINE L1 -1867 4279 4201 1570 235 57 52 chr5 64345756 64346300 -138739232 - MLT1H LTR MaLR 0 549 3 270 286 13 0 chr5 64346377 64346454 -138739078 + (TA)n Simple_repeat Simple_repeat 2 79 0 192 219 24 0 chr5 64346564 64346605 -138738927 + MIR SINE MIR 213 254 -8 21 0 0 0 chr5 64346918 64346939 -138738593 + AT_rich Low_complexity Low_complexity 1 21 0 1945 152 0 16 chr5 64346995 64347304 -138738228 - AluJb SINE Alu -8 304 1 262 280 209 31 chr5 64347921 64348146 -138737386 - MLT1J2 LTR MaLR -119 331 67 22 0 0 0 chr5 64349644 64349666 -138735866 + AT_rich Low_complexity Low_complexity 1 22 0 1067 216 65 29 chr5 64349841 64350147 -138735385 + L1ME1 LINE L1 5845 6161 -5 966 200 16 88 chr5 64350794 64351099 -138734433 + L1MD1 LINE L1 5320 5602 -564 3240 156 18 21 chr5 64351300 64351917 -138733615 + L1MD1 LINE L1 5623 6237 -5 719 268 22 114 chr5 64351920 64352331 -138733201 + L2 LINE L2 2701 3077 -236 498 315 55 22 chr5 64353644 64353825 -138731707 - MER5A DNA MER1_type 0 189 3 413 255 134 103 chr5 64354420 64354808 -138730724 + MLT1J LTR MaLR 109 508 -3 1639 176 57 23 chr5 64356017 64356370 -138729162 - MLT1A1 LTR MaLR 0 365 1 420 282 51 39 chr5 64356797 64356953 -138728579 + MIR SINE MIR 48 205 -57 314 247 37 0 chr5 64358201 64358282 -138727250 + MIR3 SINE MIR 92 175 -33 618 286 22 27 chr5 64358396 64358620 -138726912 - MIR SINE MIR -34 228 6 324 291 0 12 chr5 64359623 64359709 -138725823 + MIR3 SINE MIR 108 192 -16 528 133 31 0 chr5 64359817 64359915 -138725617 - L1MA9 LINE L1 0 6312 6212 309 132 19 0 chr5 64359915 64359968 -138725564 + L1MA9 LINE L1 5805 5858 -454 366 23 0 0 chr5 64360646 64360689 -138724843 + (CA)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr5 64362812 64362834 -138722698 + (T)n Simple_repeat Simple_repeat 1 22 0 2115 129 3 0 chr5 64363418 64363721 -138721811 + AluSx SINE Alu 1 304 -8 248 137 20 0 chr5 64363954 64364005 -138721527 + T-rich Low_complexity Low_complexity 5 56 0 1743 232 78 21 chr5 64364109 64364544 -138720988 - MLT1C LTR MaLR -4 463 4 324 70 0 0 chr5 64365172 64365215 -138720317 + (TG)n Simple_repeat Simple_repeat 2 44 0 181 327 0 0 chr5 64366509 64366564 -138718968 + L3 LINE CR1 1520 1574 -3 1119 204 45 35 chr5 64367676 64368128 -138717404 - MLT1D LTR MaLR 0 505 1 40 0 0 0 chr5 64368189 64368229 -138717303 + AT_rich Low_complexity Low_complexity 1 40 0 228 196 0 0 chr5 64368422 64368468 -138717064 - L1MA9 LINE L1 -22 6290 6245 255 271 141 47 chr5 64369162 64369461 -138716071 - L2 LINE L2 -802 2512 2186 2528 74 0 0 chr5 64369596 64369905 -138715627 + AluY SINE Alu 1 309 -2 416 157 0 0 chr5 64370687 64370757 -138714775 - MLT1D LTR MaLR 0 505 436 2415 194 26 13 chr5 64370757 64371215 -138714317 + MER44D DNA MER2_type 2 520 -85 1759 159 35 3 chr5 64371215 64371505 -138714027 - MER2 DNA MER2_type 0 345 47 576 146 0 11 chr5 64372348 64372437 -138713095 + MER44D DNA MER2_type 522 609 0 991 230 81 11 chr5 64372437 64372804 -138712728 - MLT1D LTR MaLR -67 438 1 336 248 9 83 chr5 64372903 64373012 -138712520 - L2 LINE L2 -21 3292 3192 421 291 89 13 chr5 64373186 64373344 -138712188 - L2 LINE L2 -580 2734 2565 411 56 0 0 chr5 64373855 64373909 -138711623 + (CA)n Simple_repeat Simple_repeat 1 54 0 732 297 16 12 chr5 64376160 64376416 -138709116 - MIR SINE MIR -3 259 3 189 0 0 0 chr5 64376668 64376689 -138708843 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 25 0 0 0 chr5 64377422 64377447 -138708085 + AT_rich Low_complexity Low_complexity 1 25 0 410 261 39 51 chr5 64377475 64377704 -138707828 - MLT1G LTR MaLR 0 590 294 237 333 35 26 chr5 64378342 64378456 -138707076 + MER5A DNA MER1_type 7 121 -68 2346 77 3 0 chr5 64380022 64380308 -138705224 + AluSp SINE Alu 1 287 -26 390 201 21 0 chr5 64380308 64380567 -138704965 + (TA)n Simple_repeat Simple_repeat 1 264 0 272 259 62 27 chr5 64380875 64380987 -138704545 + L2 LINE L2 3184 3299 -14 37752 87 7 9 chr5 64381144 64387310 -138698222 - L1PA6 LINE L1 -7 6147 2 204 216 0 59 chr5 64387374 64387425 -138698107 + L2 LINE L2 3217 3264 -8 2040 112 0 21 chr5 64388175 64388493 -138697039 - AluY SINE Alu 0 312 1 2283 176 73 31 chr5 64388704 64389180 -138696352 - MLT1D LTR MaLR 0 505 10 487 307 61 18 chr5 64389271 64389499 -138696033 + MER112 DNA MER1_type 9 246 -14 257 151 19 0 chr5 64389746 64389799 -138695733 + CT-rich Low_complexity Low_complexity 1 54 0 193 253 12 12 chr5 64389812 64389895 -138695637 + CT-rich Low_complexity Low_complexity 5 87 0 317 279 104 13 chr5 64389915 64390069 -138695463 - L1ME4a LINE L1 -10 6111 5944 2208 117 3 0 chr5 64390369 64390678 -138694854 - AluSp SINE Alu -3 310 1 384 321 95 12 chr5 64390827 64390995 -138694537 + MER5A DNA MER1_type 7 188 -1 383 292 84 55 chr5 64391121 64391300 -138694232 - MIR3 SINE MIR -21 187 2 25 0 0 0 chr5 64392241 64392266 -138693266 + AT_rich Low_complexity Low_complexity 1 25 0 204 225 0 0 chr5 64392934 64392974 -138692558 + CT-rich Low_complexity Low_complexity 2 41 0 377 308 8 45 chr5 64393877 64394010 -138691522 - L3 LINE CR1 -40 1537 1410 901 282 56 24 chr5 64394588 64394840 -138690692 - MIR SINE MIR -1 261 2 204 319 11 32 chr5 64394842 64394936 -138690596 + MER5A DNA MER1_type 25 116 -73 2024 158 3 0 chr5 64395177 64395488 -138690044 - AluJo SINE Alu 0 312 1 308 274 36 108 chr5 64396702 64396925 -138688607 - L3b LINE CR1 -262 1321 1115 2165 113 0 0 chr5 64397514 64397850 -138687682 + AluSx SINE Alu 1 336 0 432 283 58 44 chr5 64398567 64398772 -138686760 - MIR SINE MIR -53 209 2 364 293 180 7 chr5 64398794 64398944 -138686588 - MIR SINE MIR -12 250 75 2150 133 0 0 chr5 64399737 64400031 -138685501 - AluSx SINE Alu -18 294 1 204 40 0 0 chr5 64400036 64400061 -138685471 + (TTTTTA)n Simple_repeat Simple_repeat 2 26 0 456 320 58 19 chr5 64400445 64400651 -138684881 - Charlie8 DNA MER1_type -2181 236 23 321 173 0 0 chr5 64401002 64401054 -138684478 + MER94 DNA DNA 83 134 0 285 267 61 28 chr5 64401115 64401309 -138684223 + L1MCa LINE L1 1304 1752 -1035 395 262 73 40 chr5 64401462 64401699 -138683833 + L1MCa LINE L1 1703 2285 -4141 465 303 76 0 chr5 64402208 64402353 -138683179 - MIR3 SINE MIR -21 187 32 485 19 0 0 chr5 64403126 64403180 -138682352 - L1PA3 LINE L1 -53 6102 6049 503 30 0 0 chr5 64403180 64403247 -138682285 + L1PA2 LINE L1 6087 6153 -2 25 0 0 0 chr5 64403254 64403279 -138682253 + AT_rich Low_complexity Low_complexity 1 25 0 389 320 40 34 chr5 64403308 64403483 -138682049 - L2 LINE L2 -1317 1997 1822 283 305 11 16 chr5 64403618 64403749 -138681783 + MIR SINE MIR 18 143 -65 22 0 0 0 chr5 64404003 64404025 -138681507 + AT_rich Low_complexity Low_complexity 1 22 0 1884 136 10 7 chr5 64404030 64404338 -138681194 + L1MC1 LINE L1 6007 6315 -18 1079 177 57 137 chr5 64406724 64407015 -138678517 - MLT1B LTR MaLR 0 390 142 888 81 0 8 chr5 64407015 64407139 -138678393 + L1PB1 LINE L1 6024 6146 -5 1079 177 57 137 chr5 64407139 64407271 -138678261 - MLT1B LTR MaLR -248 142 1 272 233 0 17 chr5 64407540 64407600 -138677932 + L2 LINE L2 3214 3272 0 25 31 0 0 chr5 64408439 64408471 -138677061 + AT_rich Low_complexity Low_complexity 1 32 0 680 294 80 34 chr5 64409702 64410117 -138675415 - Tigger8 DNA MER2_type -14 652 219 265 301 180 6 chr5 64411401 64411584 -138673948 - MIR SINE MIR -12 250 36 182 246 66 0 chr5 64411581 64411642 -138673890 - MIR SINE MIR -81 181 117 * 3071 231 30 5 chr5 64411997 64412785 -138672747 - L1M1 LINE L1 -4261 3304 2497 1069 198 23 0 chr5 64412786 64413043 -138672489 + L1MA4 LINE L1 6034 6296 -4 907 228 52 0 chr5 64413656 64413867 -138671665 + MER58A DNA MER1_type 2 223 -1 205 147 0 0 chr5 64415383 64415417 -138670115 - L2 LINE L2 -1 3312 3279 446 314 41 6 chr5 64415806 64415978 -138669554 + MER5B DNA MER1_type 1 178 0 195 42 0 0 chr5 64416404 64416428 -138669104 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 1759 165 96 6 chr5 64416451 64416815 -138668717 - L1MB3 LINE L1 -1 6182 5786 239 200 91 27 chr5 64416820 64416930 -138668602 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 310 242 11 42 chr5 64416946 64417041 -138668491 - L1MC4 LINE L1 -1339 6703 6612 434 129 20 20 chr5 64417041 64417142 -138668390 + (TA)n Simple_repeat Simple_repeat 1 101 0 27 49 0 0 chr5 64417456 64417497 -138668035 + AT_rich Low_complexity Low_complexity 1 41 0 2381 108 37 6 chr5 64417999 64418352 -138667180 - THE1B LTR MaLR 0 364 1 26 0 0 0 chr5 64419267 64419293 -138666239 + AT_rich Low_complexity Low_complexity 1 26 0 632 12 0 24 chr5 64419301 64419384 -138666148 - L1PA2 LINE L1 -2 6153 6073 33 43 0 0 chr5 64419484 64419531 -138666001 + AT_rich Low_complexity Low_complexity 1 47 0 476 353 73 59 chr5 64420023 64420431 -138665101 + L2 LINE L2 2859 3272 0 505 238 17 130 chr5 64421774 64422005 -138663527 + L2 LINE L2 2331 2535 -779 2652 249 46 5 chr5 64422005 64422632 -138662900 + MER82 DNA MER2_type 1 653 0 1034 198 72 5 chr5 64422673 64422880 -138662652 - MLT1C LTR MaLR -2 465 245 242 262 12 24 chr5 64423238 64423322 -138662210 - L1M4 LINE L1 -2714 3432 3350 671 236 118 22 chr5 64423455 64423793 -138661739 + LTR43 LTR ERV1 180 453 -59 925 131 106 5 chr5 64423814 64424022 -138661510 - MLT1C LTR MaLR -175 215 1 1437 278 40 27 chr5 64424022 64424595 -138660937 + L2 LINE L2 2567 3154 -159 351 0 0 0 chr5 64424595 64424634 -138660898 + (TA)n Simple_repeat Simple_repeat 2 40 0 1437 278 40 27 chr5 64424634 64424795 -138660737 + L2 LINE L2 3154 3311 -2 234 216 20 0 chr5 64424833 64424884 -138660648 + L2 LINE L2 3188 3239 -33 213 175 0 0 chr5 64425581 64425621 -138659911 + (TG)n Simple_repeat Simple_repeat 2 41 0 2178 118 0 0 chr5 64428103 64428390 -138657142 + AluSg SINE Alu 1 287 -23 1086 262 47 105 chr5 64428453 64429137 -138656395 - MER21B LTR ERV1 -196 667 24 2159 112 3 0 chr5 64429285 64429580 -138655952 + AluSx SINE Alu 1 296 -16 22 35 0 0 chr5 64430431 64430460 -138655072 + AT_rich Low_complexity Low_complexity 1 29 0 268 262 58 58 chr5 64430662 64430765 -138654767 + MIR SINE MIR 81 183 -79 198 0 0 0 chr5 64430813 64430835 -138654697 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 388 264 58 86 chr5 64430842 64430954 -138654578 + MER5B DNA MER1_type 4 111 -67 2505 64 6 14 chr5 64430954 64431299 -138654233 - L1PA8 LINE L1 0 6172 5831 388 264 58 86 chr5 64431299 64431360 -138654172 + MER5B DNA MER1_type 111 172 -6 180 0 0 0 chr5 64432330 64432350 -138653182 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2415 68 16 3 chr5 64432677 64432984 -138652548 + AluY SINE Alu 1 311 0 648 197 49 22 chr5 64434782 64434965 -138650567 + MER53 DNA DNA 2 189 0 24 67 0 0 chr5 64435290 64435335 -138650197 + AT_rich Low_complexity Low_complexity 1 45 0 203 295 127 42 chr5 64435840 64436006 -138649526 + L2 LINE L2 3119 3298 -15 214 256 0 0 chr5 64436151 64436194 -138649338 + (TG)n Simple_repeat Simple_repeat 2 44 0 449 228 75 94 chr5 64436286 64436618 -138648914 + MLT1J2 LTR MaLR 1 333 -117 192 311 16 16 chr5 64437103 64437164 -138648368 - L2 LINE L2 -225 3047 2987 423 106 0 0 chr5 64438356 64438422 -138647110 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 2020 120 3 0 chr5 64438429 64438712 -138646820 - AluSx SINE Alu -26 286 3 413 221 12 35 chr5 64438854 64438940 -138646592 + L2 LINE L2 3229 3312 -1 485 180 20 196 chr5 64443558 64443877 -138641655 - L1MD3 LINE L1 0 8042 7790 484 73 42 10 chr5 64443879 64443975 -138641557 + (TA)n Simple_repeat Simple_repeat 1 99 0 5210 62 54 87 chr5 64443979 64444753 -138640779 - L1PA8 LINE L1 -13 6159 5411 1497 254 53 82 chr5 64444764 64445478 -138640054 - L1MC4 LINE L1 -273 7769 7076 2349 63 0 11 chr5 64445478 64445808 -138639724 - AluY SINE Alu 0 327 1 1497 254 53 82 chr5 64445808 64445862 -138639670 - L1MC4 LINE L1 -966 7076 7022 332 274 60 0 chr5 64445894 64445978 -138639554 - L2 LINE L2 0 3313 3225 257 240 120 0 chr5 64446979 64447054 -138638478 + L2 LINE L2 3189 3272 0 488 291 191 0 chr5 64447880 64448069 -138637463 + MIR SINE MIR 19 243 -19 268 289 74 16 chr5 64448261 64448382 -138637150 - L2 LINE L2 -6 3307 3180 303 28 0 0 chr5 64448595 64448631 -138636901 + (TC)n Simple_repeat Simple_repeat 1 36 0 252 0 0 0 chr5 64448630 64448658 -138636874 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 22 0 0 0 chr5 64448970 64448992 -138636540 + AT_rich Low_complexity Low_complexity 1 22 0 192 158 0 0 chr5 64449190 64449228 -138636304 + (CA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 64449512 64449533 -138635999 + AT_rich Low_complexity Low_complexity 1 21 0 1243 221 73 10 chr5 64449552 64449855 -138635677 - MER33 DNA MER1_type -2 322 1 23 39 0 39 chr5 64449952 64449979 -138635553 + AT_rich Low_complexity Low_complexity 1 27 -23 2134 112 7 0 chr5 64449979 64450265 -138635267 + AluSq SINE Alu 1 288 -25 23 39 0 39 chr5 64450265 64450289 -138635243 + AT_rich Low_complexity Low_complexity 27 50 0 1413 192 97 18 chr5 64450414 64450795 -138634737 - LTR37A LTR ERV1 -3 423 13 190 343 67 22 chr5 64450841 64450975 -138634557 + MIR3 SINE MIR 55 194 -14 386 238 42 58 chr5 64453110 64453299 -138632233 - L1ME4a LINE L1 -175 5946 5761 2144 130 132 43 chr5 64453331 64453684 -138631848 + MSTA LTR MaLR 1 394 -34 2295 100 0 3 chr5 64453684 64453983 -138631549 - AluSg1 SINE Alu -11 298 1 2144 130 132 43 chr5 64453983 64454022 -138631510 + MSTA LTR MaLR 394 428 0 368 216 82 41 chr5 64454968 64455065 -138630467 - L2 LINE L2 0 3272 3172 592 279 174 29 chr5 64455293 64455742 -138629790 - L2 LINE L2 0 3313 2324 1291 247 139 58 chr5 64455952 64456938 -138628594 - L2 LINE L2 -2 3311 2204 22 0 0 0 chr5 64458826 64458848 -138626684 + AT_rich Low_complexity Low_complexity 1 22 0 309 109 0 0 chr5 64459384 64459430 -138626102 + (T)n Simple_repeat Simple_repeat 1 46 0 428 321 98 18 chr5 64461333 64461669 -138623863 + L2 LINE L2 1060 1422 -1892 200 268 113 0 chr5 64461666 64461737 -138623795 + L2 LINE L2 3194 3272 0 * 1115 258 94 50 chr5 64462012 64462695 -138622837 - L2 LINE L2 -11 3302 2594 248 298 106 35 chr5 64462703 64462844 -138622688 + L2 LINE L2 1756 1906 -1408 629 311 107 10 chr5 64463036 64463345 -138622187 - MER102b DNA MER1_type 0 341 3 216 339 18 27 chr5 64463710 64463822 -138621710 + MIR SINE MIR 33 143 -119 255 358 82 32 chr5 64463840 64464156 -138621376 + L2 LINE L2 2043 2374 -940 512 265 166 61 chr5 64464213 64464575 -138620957 - MLT1J2 LTR MaLR -13 433 34 366 344 52 83 chr5 64464815 64465163 -138620369 + L2 LINE L2 2830 3162 -110 3022 58 3 0 chr5 64465163 64465522 -138620010 - L1PA5 LINE L1 0 6154 5795 366 344 52 83 chr5 64465522 64465630 -138619902 + L2 LINE L2 3162 3272 0 599 309 66 23 chr5 64466298 64466557 -138618975 + L2 LINE L2 2199 2468 -846 267 123 27 14 chr5 64466888 64466961 -138618571 + (TA)n Simple_repeat Simple_repeat 2 75 0 1516 212 0 10 chr5 64466963 64467255 -138618277 - AluJo SINE Alu -23 289 1 22 0 0 0 chr5 64468413 64468435 -138617097 + AT_rich Low_complexity Low_complexity 1 22 0 754 184 92 37 chr5 64468965 64469128 -138616404 - MER105 DNA DNA -4 200 29 2193 98 152 0 chr5 64471796 64472112 -138613420 - THE1B LTR MaLR 0 364 1 441 274 9 18 chr5 64472587 64472700 -138612832 + MER81 DNA DNA 2 113 -1 599 249 0 55 chr5 64472753 64472934 -138612598 - MER5B DNA MER1_type -7 171 1 470 198 0 0 chr5 64473110 64473191 -138612341 - MER5A DNA MER1_type -85 104 24 1620 214 52 86 chr5 64473205 64473728 -138611804 + MLT1D LTR MaLR 1 505 0 290 231 123 8 chr5 64474955 64475085 -138610447 + L1ME4a LINE L1 5977 6121 0 470 250 28 62 chr5 64477102 64477246 -138608286 - MIR SINE MIR -111 151 13 830 229 0 0 chr5 64477449 64477606 -138607926 - MER5B DNA MER1_type -6 172 16 436 309 43 12 chr5 64477602 64477764 -138607768 + L2 LINE L2 2234 2400 -914 * 366 257 0 46 chr5 64478348 64478457 -138607075 - MLT1K LTR MaLR -30 558 455 312 328 81 16 chr5 64478801 64478987 -138606545 - MLT1K LTR MaLR -369 219 22 21 0 0 0 chr5 64479121 64479142 -138606390 + AT_rich Low_complexity Low_complexity 1 21 0 189 305 85 85 chr5 64479459 64479600 -138605932 + MIR SINE MIR 66 206 -56 400 239 75 44 chr5 64480188 64480347 -138605185 - MER97b DNA MER1_type? -3 1050 887 698 221 43 55 chr5 64480409 64480644 -138604888 - MER97b DNA MER1_type? -797 256 25 1665 121 96 0 chr5 64485303 64485575 -138599957 + AluSc SINE Alu 1 298 -11 201 267 0 0 chr5 64485636 64485681 -138599851 + (CATA)n Simple_repeat Simple_repeat 2 46 0 352 296 63 1 chr5 64485697 64485831 -138599701 - MER5A DNA MER1_type -37 152 1 201 147 0 0 chr5 64486267 64486301 -138599231 + (T)n Simple_repeat Simple_repeat 1 34 0 26 30 0 0 chr5 64486645 64486678 -138598854 + AT_rich Low_complexity Low_complexity 1 33 0 396 245 66 0 chr5 64486713 64486819 -138598713 - MIR SINE MIR -74 188 76 392 205 123 33 chr5 64486848 64486970 -138598562 - MER5A DNA MER1_type -31 158 26 2845 107 0 3 chr5 64486987 64487352 -138598180 + THE1B LTR MaLR 1 364 0 330 342 95 13 chr5 64488353 64488511 -138597021 + MIR SINE MIR 63 233 -29 835 281 150 11 chr5 64488530 64488964 -138596568 - LTR33 LTR ERVL -9 512 19 237 33 0 0 chr5 64489010 64489040 -138596492 + (CA)n Simple_repeat Simple_repeat 2 31 0 335 23 23 0 chr5 64489379 64489423 -138596109 + (TA)n Simple_repeat Simple_repeat 2 46 0 2164 234 60 51 chr5 64490110 64490478 -138595054 + L1MC4 LINE L1 7093 7457 -585 2134 151 20 8 chr5 64490478 64490835 -138594697 + MER46B DNA MER2_type 1 236 0 2164 234 60 51 chr5 64490835 64491364 -138594168 + L1MC4 LINE L1 7457 7993 -49 218 313 0 16 chr5 64491450 64491514 -138594018 - MIR SINE MIR -166 96 34 466 258 83 49 chr5 64494884 64495210 -138590322 - MLT1J2 LTR MaLR -132 379 3 2328 92 0 3 chr5 64495804 64496099 -138589433 + AluSg SINE Alu 1 294 -16 252 86 0 0 chr5 64496693 64496728 -138588804 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 64496846 64496868 -138588664 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr5 64497117 64497140 -138588392 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 1505 137 0 21 chr5 64497411 64497645 -138587887 + AluSg/x SINE Alu 82 310 0 725 291 49 12 chr5 64498125 64498372 -138587160 + MIR SINE MIR 7 262 0 2436 86 0 0 chr5 64498637 64498939 -138586593 + AluY SINE Alu 2 303 -8 954 228 106 22 chr5 64500265 64500585 -138584947 + MLT1A1 LTR MaLR 19 365 0 283 274 118 66 chr5 64500728 64500982 -138584550 - LTR33 LTR ERVL -246 277 5 291 28 0 0 chr5 64501055 64501091 -138584441 + (TC)n Simple_repeat Simple_repeat 2 37 0 225 0 0 0 chr5 64501090 64501115 -138584417 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1979 129 0 0 chr5 64501323 64501595 -138583937 - AluSx SINE Alu -40 272 1 348 64 0 0 chr5 64502040 64502087 -138583445 + (TG)n Simple_repeat Simple_repeat 2 48 0 666 206 29 0 chr5 64503034 64503170 -138582362 + MER5A DNA MER1_type 47 186 -3 215 265 44 44 chr5 64503238 64503306 -138582226 + L2 LINE L2 3124 3191 -81 200 405 81 0 chr5 64503613 64503724 -138581808 - MIR SINE MIR -61 147 28 551 262 38 38 chr5 64503730 64503913 -138581619 + MIR SINE MIR 51 233 -29 263 49 24 0 chr5 64504279 64504320 -138581212 + (TA)n Simple_repeat Simple_repeat 1 42 0 294 143 0 0 chr5 64504657 64504706 -138580826 + (TA)n Simple_repeat Simple_repeat 2 50 0 1093 250 62 12 chr5 64504706 64505046 -138580486 - LTR37A LTR ERV1 -24 402 46 355 284 67 22 chr5 64506288 64506422 -138579110 + MIR3 SINE MIR 41 180 -28 380 340 56 60 chr5 64506737 64506969 -138578563 - L2 LINE L2 0 3272 3042 400 279 36 36 chr5 64507159 64507198 -138578334 + MER69A DNA AcHobo 34 72 -2454 1372 293 107 9 chr5 64507198 64507645 -138577887 - LTR16C LTR ERVL 0 491 1 400 279 36 36 chr5 64507645 64507745 -138577787 + MER69A DNA AcHobo 71 173 -4 228 275 158 42 chr5 64508710 64508830 -138576702 - MER5B DNA MER1_type -10 168 35 207 0 0 0 chr5 64509544 64509567 -138575965 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 215 229 76 18 chr5 64510237 64510343 -138575189 - MIR SINE MIR -62 146 64 525 259 41 35 chr5 64510590 64510639 -138574893 + HsTC2 DNA Tc2 3 50 -1848 1861 134 39 14 chr5 64510639 64510922 -138574610 + AluSx SINE Alu 1 290 -22 525 259 41 35 chr5 64510922 64511042 -138574490 + HsTC2 DNA Tc2 50 173 -1725 643 239 90 2 chr5 64511067 64511321 -138574211 + HsTC2 DNA Tc2 275 586 -1312 202 304 87 52 chr5 64512870 64513100 -138572432 - L3b LINE CR1 -212 1371 1134 807 228 55 10 chr5 64513272 64513474 -138572058 + MIR SINE MIR 15 225 -37 1989 137 19 13 chr5 64514290 64514597 -138570935 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 64514802 64514824 -138570708 + AT_rich Low_complexity Low_complexity 1 22 0 4021 32 2 0 chr5 64514827 64515292 -138570240 - L1PA3 LINE L1 -55 6100 5635 613 221 9 0 chr5 64515663 64515776 -138569756 + MER81 DNA DNA 1 114 0 239 363 77 33 chr5 64516591 64516773 -138568759 + MIR SINE MIR 16 205 -57 256 341 49 24 chr5 64516891 64517014 -138568518 - L2 LINE L2 0 3272 3147 765 238 48 28 chr5 64517589 64517837 -138567695 + MER112 DNA MER1_type 4 256 0 922 208 66 42 chr5 64518874 64519086 -138566446 - MER20 DNA MER1_type -2 217 1 1592 213 21 27 chr5 64519747 64520122 -138565410 - MLT1A2 LTR MaLR -1 373 1 2286 83 7 7 chr5 64520264 64520566 -138564966 + AluY SINE Alu 2 303 -8 595 93 206 0 chr5 64520720 64520817 -138564715 - MSTC LTR MaLR -309 119 3 2343 100 0 0 chr5 64520872 64521172 -138564360 + AluSq SINE Alu 1 300 -13 29 0 0 0 chr5 64521775 64521804 -138563728 + GC_rich Low_complexity Low_complexity 1 29 0 1589 148 7 17 chr5 64523066 64523357 -138562175 - AluSq SINE Alu -25 288 1 2421 99 0 0 chr5 64523509 64523811 -138561721 - AluSx SINE Alu -10 302 1 28 0 0 0 chr5 64523826 64523854 -138561678 + AT_rich Low_complexity Low_complexity 1 28 0 1101 117 7 7 chr5 64525078 64525232 -138560300 + AluSq SINE Alu 1 154 -159 477 168 239 9 chr5 64525336 64525449 -138560083 - MER44D DNA MER2_type -183 426 18 196 283 94 19 chr5 64525488 64525594 -138559938 + MIR SINE MIR 121 234 -28 964 61 0 23 chr5 64526095 64526227 -138559305 - AluSg/x SINE Alu -4 308 180 668 106 0 0 chr5 64526421 64526506 -138559026 - AluY SINE Alu -225 85 1 2026 98 4 7 chr5 64527478 64527755 -138557777 - AluY SINE Alu -7 304 29 2414 70 0 6 chr5 64528566 64528878 -138556654 + AluY SINE Alu 1 310 -1 26 0 0 0 chr5 64529327 64529353 -138556179 + AT_rich Low_complexity Low_complexity 1 26 0 236 333 14 0 chr5 64530684 64530756 -138554776 + MIR SINE MIR 38 110 -98 2154 233 60 41 chr5 64530995 64531575 -138553957 + MLT1E LTR MaLR 1 591 -2 189 74 0 0 chr5 64531713 64531740 -138553792 + (GAATG)n Simple_repeat Simple_repeat 2 28 0 332 250 144 30 chr5 64531741 64531873 -138553659 - MER112 DNA MER1_type -111 149 3 1830 222 66 54 chr5 64532328 64532827 -138552705 + MLT1D LTR MaLR 1 505 0 605 228 242 18 chr5 64533101 64533320 -138552212 - LTR16A1 LTR ERVL -1 456 189 210 239 0 0 chr5 64534340 64534386 -138551146 + GA-rich Low_complexity Low_complexity 1 46 0 229 191 0 24 chr5 64534947 64534989 -138550543 - L2 LINE L2 -16 3256 3216 2597 194 50 94 chr5 64535022 64535516 -138550016 - L1ME1 LINE L1 -3 6163 5649 2262 111 18 103 chr5 64535516 64535914 -138549618 - THE1B LTR MaLR 0 364 1 2597 194 50 94 chr5 64535914 64536030 -138549502 - L1ME1 LINE L1 -517 5649 5587 1692 196 10 6 chr5 64536030 64536341 -138549191 + AluJo SINE Alu 1 312 0 2597 194 50 94 chr5 64536341 64536450 -138549082 - L1ME1 LINE L1 -579 5587 5475 213 94 0 0 chr5 64536471 64536503 -138549029 + (TG)n Simple_repeat Simple_repeat 2 33 0 1742 157 118 89 chr5 64536538 64536706 -138548826 - L1MB5 LINE L1 -154 6020 5858 2368 96 0 0 chr5 64536706 64536999 -138548533 - AluSg SINE Alu -17 293 1 1742 157 118 89 chr5 64536999 64537315 -138548217 - L1MB5 LINE L1 -316 5858 5522 2049 211 115 89 chr5 64537508 64538168 -138547364 + LTR48 LTR ERV1 1 685 -102 4748 122 50 52 chr5 64538168 64538949 -138546583 + MER4E LTR ERV1 1 779 0 2049 211 115 89 chr5 64538949 64539055 -138546477 + LTR48 LTR ERV1 685 787 0 1296 157 55 5 chr5 64539278 64539495 -138546037 + AluSx SINE Alu 1 228 -84 787 201 52 52 chr5 64539808 64539853 -138545679 + MER96 DNA MER1_type 1 45 -130 2154 106 3 10 chr5 64539853 64540168 -138545364 - AluSx SINE Alu 0 312 1 787 201 52 52 chr5 64540168 64540296 -138545236 + MER96 DNA MER1_type 44 174 -1 6316 65 30 13 chr5 64540450 64541217 -138544315 + LTR17 LTR ERV1 1 780 0 2342 196 28 32 chr5 64541217 64541723 -138543809 + MLT1D LTR MaLR 2 505 0 225 180 80 0 chr5 64543054 64543104 -138542428 + MER94 DNA DNA 5 58 -76 4995 158 22 3 chr5 64543736 64544501 -138541031 + LTR39 LTR ERV1 2 781 -2 231 250 73 0 chr5 64544502 64544570 -138540962 + MER20B DNA MER1_type 114 186 -597 194 0 39 0 chr5 64546564 64546590 -138538942 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1854 198 3 0 chr5 64546634 64546977 -138538555 - MER7A DNA MER2_type -3 343 2 767 188 0 0 chr5 64548304 64548432 -138537100 - FLAM_C SINE Alu -15 128 1 1612 196 16 45 chr5 64548441 64548864 -138536668 + MLT1C LTR MaLR 54 464 -3 234 0 0 0 chr5 64548981 64549007 -138536525 + (A)n Simple_repeat Simple_repeat 1 26 0 314 262 57 66 chr5 64549980 64550102 -138535430 + L1MC4 LINE L1 6583 6703 -1339 1591 178 0 34 chr5 64550230 64550545 -138534987 + AluJb SINE Alu 1 305 0 2678 150 22 13 chr5 64551445 64551906 -138533626 - MER4C LTR ERV1 0 465 1 215 306 216 0 chr5 64551935 64552069 -138533463 - MIR SINE MIR -10 252 90 194 103 0 51 chr5 64552789 64552828 -138532704 + (TTTC)n Simple_repeat Simple_repeat 2 38 0 872 259 98 27 chr5 64553103 64553439 -138532093 + MLT1J LTR MaLR 130 489 -22 2946 53 21 28 chr5 64553567 64554039 -138531493 + L1PA4 LINE L1 5629 6097 -58 22 0 0 0 chr5 64554045 64554067 -138531465 + AT_rich Low_complexity Low_complexity 1 22 0 2017 130 19 13 chr5 64554272 64554579 -138530953 - AluJb SINE Alu -3 309 1 822 228 55 10 chr5 64555395 64555597 -138529935 - MIR SINE MIR -37 225 15 21 36 0 0 chr5 64556230 64556258 -138529274 + AT_rich Low_complexity Low_complexity 1 28 0 264 59 0 0 chr5 64557295 64557329 -138528203 + (TA)n Simple_repeat Simple_repeat 1 34 0 2235 98 10 0 chr5 64558440 64558737 -138526795 - AluSq SINE Alu -13 300 1 210 311 153 38 chr5 64559421 64559630 -138525902 + L2 LINE L2 2244 2476 -838 312 317 39 0 chr5 64559848 64559952 -138525580 - MIR3 SINE MIR -15 193 86 204 175 0 25 chr5 64560010 64560050 -138525482 + MIR SINE MIR 105 143 -119 447 236 94 140 chr5 64560106 64560605 -138524927 + MLT1H1 LTR MaLR 76 551 -4 662 226 221 64 chr5 64561287 64561645 -138523887 - L2 LINE L2 -5 3308 2895 236 206 155 0 chr5 64561894 64561991 -138523541 - MER20B DNA MER1_type -121 662 551 760 219 20 0 chr5 64562012 64562163 -138523369 + MIR SINE MIR 67 220 -42 1199 254 55 19 chr5 64562272 64562638 -138522894 - MER20B DNA MER1_type -373 410 32 301 250 0 0 chr5 64563005 64563065 -138522467 - L2 LINE L2 -5 3267 3208 326 279 229 11 chr5 64563401 64563580 -138521952 - MIR SINE MIR -9 253 36 226 293 172 10 chr5 64563871 64563970 -138521562 - MIR SINE MIR -72 136 22 1958 127 0 54 chr5 64564037 64564353 -138521179 + AluJo SINE Alu 1 299 -13 586 159 0 37 chr5 64564637 64564744 -138520788 - MIR SINE MIR -130 132 30 2530 192 64 90 chr5 64566289 64567524 -138518008 + L1ME1 LINE L1 4952 6157 -9 2071 123 13 3 chr5 64567782 64568083 -138517449 + AluSx SINE Alu 1 304 -8 26 0 0 0 chr5 64568124 64568150 -138517382 + AT_rich Low_complexity Low_complexity 1 26 0 723 82 0 0 chr5 64568418 64568516 -138517016 + L1PA5 LINE L1 1 98 -6048 * 34103 64 7 4 chr5 64568514 64574030 -138511502 + L1PA5 LINE L1 623 6154 0 195 42 0 0 chr5 64574126 64574150 -138511382 + (T)n Simple_repeat Simple_repeat 1 24 0 283 300 0 25 chr5 64574283 64574403 -138511129 - MER103 DNA DNA -49 117 1 491 278 201 39 chr5 64574512 64574850 -138510682 - L2 LINE L2 0 3313 2921 243 283 121 0 chr5 64574923 64575022 -138510510 - L2 LINE L2 -549 2765 2655 279 333 65 26 chr5 64575025 64575178 -138510354 - L2 LINE L2 -787 2527 2369 219 327 29 39 chr5 64575658 64575762 -138509770 + MIR SINE MIR 5 107 -155 394 280 45 23 chr5 64576489 64576621 -138508911 - MIR SINE MIR 0 262 128 360 0 0 0 chr5 64577608 64577648 -138507884 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1127 116 0 0 chr5 64577926 64578073 -138507459 + AluSq/x SINE Alu 1 147 -166 323 281 48 43 chr5 64578262 64578400 -138507132 - MIR SINE MIR -68 140 54 2152 125 0 3 chr5 64579569 64579866 -138505666 + AluSg SINE Alu 1 296 -14 1594 140 44 76 chr5 64580037 64580352 -138505180 + AluJb SINE Alu 1 305 -7 2051 121 38 0 chr5 64580575 64580865 -138504667 - AluSx SINE Alu -11 301 1 2270 95 7 0 chr5 64580874 64581170 -138504362 - AluSg SINE Alu -12 298 1 255 61 0 0 chr5 64583174 64583207 -138502325 + tRNA-Leu-TTG tRNA tRNA 1 33 -53 5841 150 29 24 chr5 64583461 64584610 -138500922 - L1MC3 LINE L1 -2 7783 6629 331 256 91 16 chr5 64585210 64585331 -138500201 - MIR SINE MIR -119 143 14 4875 154 19 55 chr5 64585713 64585804 -138499728 + L1MA7 LINE L1 4325 4418 -1812 2345 75 0 13 chr5 64585804 64586112 -138499420 + AluY SINE Alu 1 304 -7 4875 154 19 55 chr5 64586112 64587133 -138498399 + L1MA7 LINE L1 4418 5390 -840 1621 174 31 0 chr5 64587133 64587421 -138498111 + AluJo SINE Alu 1 297 -15 4875 154 19 55 chr5 64587421 64587505 -138498027 + L1MA7 LINE L1 5390 5475 -755 1301 93 51 42 chr5 64587507 64587723 -138497809 - L1PA11 LINE L1 0 6174 5957 4001 157 24 29 chr5 64587723 64588038 -138497494 + L1MA7 LINE L1 5453 5768 -523 287 25 25 0 chr5 64588038 64588078 -138497454 + (TA)n Simple_repeat Simple_repeat 1 41 0 2267 96 0 3 chr5 64588087 64588389 -138497143 + AluY SINE Alu 1 301 -10 4001 157 24 29 chr5 64588389 64588896 -138496636 + L1MA7 LINE L1 5776 6289 -2 24 32 0 0 chr5 64588899 64588930 -138496602 + AT_rich Low_complexity Low_complexity 1 31 0 2112 70 4 0 chr5 64588988 64589245 -138496287 + AluSc SINE Alu 27 284 -25 435 299 63 34 chr5 64589411 64589618 -138495914 - MIR SINE MIR -13 249 37 22 35 0 0 chr5 64589758 64589787 -138495745 + AT_rich Low_complexity Low_complexity 1 29 0 446 302 53 36 chr5 64592207 64592432 -138493100 - MIR SINE MIR -3 259 31 624 196 65 0 chr5 64593277 64593430 -138492102 - L1M2 LINE L1 -6685 164 2 603 267 36 78 chr5 64593689 64594118 -138491414 - MER110 LTR ERV1 -19 472 78 834 176 102 84 chr5 64594305 64594589 -138490943 - MER110-int LTR ERV1 -67 4580 4292 367 202 11 56 chr5 64594613 64594702 -138490830 + MER58A DNA MER1_type 4 88 -19 2218 122 0 3 chr5 64594789 64595092 -138490440 - AluSx SINE Alu -10 302 1 1911 177 0 13 chr5 64595612 64595928 -138489604 - AluJo SINE Alu 0 312 1 344 283 139 6 chr5 64597317 64597490 -138488042 + MER112 DNA MER1_type 64 259 -1 214 219 97 75 chr5 64597504 64597638 -138487894 - MIR SINE MIR -56 206 71 2056 198 49 12 chr5 64597732 64598141 -138487391 + MSTB LTR MaLR 1 424 -2 927 281 109 37 chr5 64598142 64598701 -138486831 - MLT1L LTR MaLR 0 511 7 320 274 55 0 chr5 64598980 64599053 -138486479 - L2 LINE L2 -25 3247 3171 597 276 52 0 chr5 64600080 64600254 -138485278 - MER5A DNA MER1_type 0 189 7 2095 110 13 13 chr5 64600360 64600659 -138484873 + AluSx SINE Alu 1 299 -13 299 284 0 25 chr5 64602235 64602316 -138483216 + MIR SINE MIR 81 159 -103 1839 171 78 20 chr5 64602889 64603234 -138482298 - MLT1A1 LTR MaLR 0 365 1 568 248 168 25 chr5 64604363 64604601 -138480931 - L2 LINE L2 -8 3305 3034 470 276 68 97 chr5 64604608 64604948 -138480584 + L2 LINE L2 2857 3186 -86 234 0 0 0 chr5 64605605 64605631 -138479901 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 21 57 0 0 chr5 64606471 64606506 -138479026 + AT_rich Low_complexity Low_complexity 1 35 0 30590 98 12 13 chr5 64610569 64615941 -138469591 + L1PA7 LINE L1 786 6146 -8 4615 127 40 10 chr5 64616324 64617104 -138468428 - L1MA4A LINE L1 -22 6281 5479 774 189 0 49 chr5 64617126 64617269 -138468263 - FAM SINE Alu -30 155 20 2505 154 43 33 chr5 64617276 64617430 -138468102 - L1MA4A LINE L1 -743 5403 5252 1900 155 7 0 chr5 64617430 64617720 -138467812 - AluSx SINE Alu -20 292 1 2505 154 43 33 chr5 64617720 64618206 -138467326 - L1MA4A LINE L1 -894 5252 4837 * 3542 246 109 35 chr5 64618203 64619638 -138465894 - L1M2b LINE L1 -5529 1680 68 1596 314 103 19 chr5 64620932 64621868 -138463664 - HAL1 LINE L1 -1493 1014 1 1873 99 86 53 chr5 64622124 64622427 -138463105 + AluSq SINE Alu 1 313 0 1236 120 106 5 chr5 64623723 64623917 -138461615 + MER46B DNA MER2_type 1 90 -146 1651 142 45 31 chr5 64623917 64624438 -138461094 + LTR59 LTR ERV1 4 591 -6 790 156 71 13 chr5 64624438 64624592 -138460940 + MER46B DNA MER2_type 74 236 0 435 264 112 48 chr5 64624713 64624777 -138460755 - L1ME1 LINE L1 0 6166 6108 3862 136 54 65 chr5 64624777 64625512 -138460020 + LTR8A LTR ERV1 1 727 0 435 264 112 48 chr5 64625512 64625697 -138459835 - L1ME1 LINE L1 -58 6108 5901 1625 181 147 6 chr5 64626324 64626644 -138458888 - MLT1A1 LTR MaLR 0 365 1 240 261 26 70 chr5 64626852 64626967 -138458565 - MIR3 SINE MIR -85 123 14 1053 229 51 127 chr5 64626987 64627535 -138457997 + MER110 LTR ERV1 5 491 0 3022 243 126 48 chr5 64628087 64629325 -138456207 + L1MEc LINE L1 35 1368 -5028 2271 119 0 6 chr5 64629368 64629680 -138455852 + AluSx SINE Alu 1 310 -2 398 202 11 56 chr5 64629753 64629842 -138455690 - MER58A DNA MER1_type -19 88 4 960 176 102 84 chr5 64629866 64630150 -138455382 + MER110-int LTR ERV1 4292 4580 -67 702 261 40 81 chr5 64630337 64630766 -138454766 + MER110 LTR ERV1 78 472 -19 284 330 23 0 chr5 64630944 64631032 -138454500 + MSTC LTR MaLR 1 90 -338 3183 216 97 14 chr5 64631032 64631937 -138453595 + L1M2 LINE L1 9 988 -5861 288 206 48 0 chr5 64632090 64632153 -138453379 - MER58 DNA MER1_type -8 2412 2347 1750 155 7 7 chr5 64632206 64632502 -138453030 + AluJo SINE Alu 11 306 -6 2233 77 42 0 chr5 64632670 64632957 -138452575 + AluY SINE Alu 1 299 -12 2517 83 0 3 chr5 64633226 64633540 -138451992 + AluSp SINE Alu 1 313 0 266 132 19 0 chr5 64634762 64634815 -138450717 + GA-rich Low_complexity Low_complexity 1 54 0 309 194 72 86 chr5 64635010 64635149 -138450383 - L1ME4a LINE L1 -5 6116 5980 312 340 52 0 chr5 64635169 64635266 -138450266 - L2 LINE L2 -8 3305 3204 788 126 0 0 chr5 64635279 64635390 -138450142 + FRAM SINE Alu 59 169 -7 2491 65 0 0 chr5 64635525 64635818 -138449714 - AluY SINE Alu -18 293 1 189 107 0 0 chr5 64636129 64636157 -138449375 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 531 316 109 52 chr5 64636158 64636525 -138449007 - L2 LINE L2 -13 3259 2872 1893 230 140 35 chr5 64637300 64638008 -138447524 + MER20B DNA MER1_type 1 782 -2 675 319 91 21 chr5 64639331 64639806 -138445726 + L1ME3A LINE L1 5319 5829 -341 4569 51 0 13 chr5 64639851 64640397 -138445135 - L1PA4 LINE L1 0 6155 5617 996 259 98 27 chr5 64640507 64640843 -138444689 - MLT1J LTR MaLR -22 489 130 194 103 0 51 chr5 64641118 64641157 -138444375 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 227 293 226 0 chr5 64641877 64642010 -138443522 + MIR SINE MIR 90 252 -10 2914 150 22 13 chr5 64642039 64642500 -138443032 + MER4C LTR ERV1 1 465 0 1578 175 0 34 chr5 64643401 64643716 -138441816 - AluJo SINE Alu 0 305 1 238 262 57 66 chr5 64643844 64643966 -138441566 - L1MC4 LINE L1 -1339 6703 6583 234 0 0 0 chr5 64644939 64644965 -138440567 + (T)n Simple_repeat Simple_repeat 1 26 0 1790 196 16 45 chr5 64645082 64645505 -138440027 - MLT1C LTR MaLR -3 464 54 819 189 0 0 chr5 64645515 64645642 -138439890 + FLAM_C SINE Alu 2 128 -15 2016 198 3 0 chr5 64646969 64647312 -138438220 + MER7A DNA MER2_type 2 343 -3 194 0 39 0 chr5 64647356 64647382 -138438150 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 231 250 73 0 chr5 64649376 64649444 -138436088 - MER20B DNA MER1_type -597 186 114 4995 158 22 3 chr5 64649445 64650210 -138435322 - LTR39 LTR ERV1 -2 781 2 225 180 80 0 chr5 64650842 64650892 -138434640 - MER94 DNA DNA -76 58 5 2342 196 28 32 chr5 64652222 64652728 -138432804 - MLT1D LTR MaLR 0 505 2 6316 65 30 13 chr5 64652728 64653495 -138432037 - LTR17 LTR ERV1 0 780 1 787 201 52 52 chr5 64653649 64653777 -138431755 - MER96 DNA MER1_type -1 174 44 2154 106 3 10 chr5 64653777 64654092 -138431440 + AluSx SINE Alu 1 312 0 787 201 52 52 chr5 64654092 64654137 -138431395 - MER96 DNA MER1_type -130 45 1 1296 157 55 5 chr5 64654450 64654667 -138430865 - AluSx SINE Alu -84 228 1 2049 211 115 89 chr5 64654890 64654996 -138430536 - LTR48 LTR ERV1 0 787 685 4748 122 50 52 chr5 64654996 64655777 -138429755 - MER4E LTR ERV1 0 779 1 2049 211 115 89 chr5 64655777 64656437 -138429095 - LTR48 LTR ERV1 -102 685 1 1742 157 118 89 chr5 64656630 64656946 -138428586 + L1MB5 LINE L1 5522 5858 -316 2368 96 0 0 chr5 64656946 64657239 -138428293 + AluSg SINE Alu 1 293 -17 1742 157 118 89 chr5 64657239 64657407 -138428125 + L1MB5 LINE L1 5858 6020 -154 213 94 0 0 chr5 64657442 64657474 -138428058 + (CA)n Simple_repeat Simple_repeat 2 33 0 2597 194 50 94 chr5 64657495 64657604 -138427928 + L1ME1 LINE L1 5475 5587 -579 1692 196 10 6 chr5 64657604 64657915 -138427617 - AluJo SINE Alu 0 312 1 2597 194 50 94 chr5 64657915 64658031 -138427501 + L1ME1 LINE L1 5587 5707 -459 2262 111 18 103 chr5 64658031 64658429 -138427103 + THE1B LTR MaLR 1 364 0 2597 194 50 94 chr5 64658429 64658923 -138426609 + L1ME1 LINE L1 5707 6163 -3 229 191 0 24 chr5 64658956 64658998 -138426534 + L2 LINE L2 3216 3256 -16 210 239 0 0 chr5 64659561 64659607 -138425925 + CT-rich Low_complexity Low_complexity 1 46 0 605 228 242 18 chr5 64660624 64660843 -138424689 + LTR16A1 LTR ERVL 189 456 -1 1830 222 66 54 chr5 64661117 64661616 -138423916 - MLT1D LTR MaLR 0 505 1 332 250 144 30 chr5 64662071 64662203 -138423329 + MER112 DNA MER1_type 3 149 -111 189 74 0 0 chr5 64662204 64662231 -138423301 + (CATTC)n Simple_repeat Simple_repeat 2 28 0 2154 233 60 41 chr5 64662369 64662949 -138422583 - MLT1E LTR MaLR -2 591 1 236 333 14 0 chr5 64663188 64663260 -138422272 - MIR SINE MIR -98 110 38 26 0 0 0 chr5 64664591 64664617 -138420915 + AT_rich Low_complexity Low_complexity 1 26 0 2414 70 0 6 chr5 64665066 64665378 -138420154 - AluY SINE Alu -1 310 1 469 246 123 5 chr5 64667140 64667304 -138418228 + MER5A DNA MER1_type 4 189 0 2052 121 3 14 chr5 64667364 64667661 -138417871 - AluSp SINE Alu -19 294 1 251 300 38 101 chr5 64667772 64668009 -138417523 + L2 LINE L2 2829 3050 -222 241 315 28 4 chr5 64668498 64668648 -138416884 + MIR SINE MIR 56 262 0 2335 85 0 3 chr5 64669129 64669423 -138416109 + AluSp SINE Alu 1 293 -20 439 278 183 19 chr5 64670170 64670433 -138415099 + MLT1K LTR MaLR 255 560 -28 389 273 68 15 chr5 64670601 64670733 -138414799 + MIR SINE MIR 1 139 -123 258 284 71 39 chr5 64671447 64671574 -138413958 - MER5B DNA MER1_type 0 178 48 861 236 19 0 chr5 64671596 64671804 -138413728 + MIR SINE MIR 48 259 -3 309 296 19 37 chr5 64671855 64671963 -138413569 + L2 LINE L2 3148 3253 -19 23 0 0 0 chr5 64672030 64672053 -138413479 + AT_rich Low_complexity Low_complexity 1 23 0 793 261 0 75 chr5 64672386 64672426 -138413106 + MER63A DNA MER1_type 1 42 -1646 2458 74 0 13 chr5 64672426 64672736 -138412796 + AluY SINE Alu 1 306 -5 793 261 0 75 chr5 64672736 64672921 -138412611 + MER63A DNA MER1_type 42 209 -1 624 223 26 57 chr5 64673414 64673502 -138412030 - MIR SINE MIR -58 204 115 2818 139 21 5 chr5 64673502 64673927 -138411605 - MSTB1 LTR MaLR 0 432 1 624 223 26 57 chr5 64673927 64674031 -138411501 - MIR SINE MIR -147 115 18 713 294 56 11 chr5 64674305 64674574 -138410958 + MLT1J LTR MaLR 1 281 -230 350 274 111 0 chr5 64675812 64675929 -138409603 + LTR67 LTR ERVL 428 557 0 1858 77 15 19 chr5 64675968 64676228 -138409304 - L1PA10 LINE L1 -1 6167 5909 2147 124 0 3 chr5 64676394 64676684 -138408848 + AluSx SINE Alu 1 289 -23 180 0 0 0 chr5 64676687 64676707 -138408825 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 368 212 72 80 chr5 64676768 64676997 -138408535 + Charlie7 DNA MER1_type 25 2612 0 24 0 0 0 chr5 64677034 64677058 -138408474 + AT_rich Low_complexity Low_complexity 1 24 0 216 311 57 19 chr5 64678644 64678750 -138406782 + MIR SINE MIR 35 144 -118 482 270 33 108 chr5 64678834 64678908 -138406624 - MIR SINE MIR -48 214 136 2197 116 7 0 chr5 64678908 64679209 -138406323 - AluSx SINE Alu -9 303 1 482 270 33 108 chr5 64679209 64679359 -138406173 - MIR SINE MIR -126 136 12 1133 113 6 0 chr5 64679896 64680073 -138405459 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 245 111 44 0 chr5 64680077 64680122 -138405410 + CT-rich Low_complexity Low_complexity 2 48 0 702 73 27 0 chr5 64681790 64681900 -138403632 + (TCTA)n Simple_repeat Simple_repeat 3 115 0 326 200 131 95 chr5 64682371 64682539 -138402993 - MIR SINE MIR -62 146 10 369 306 45 38 chr5 64682962 64683119 -138402413 + MIR3 SINE MIR 34 191 -17 27 0 0 0 chr5 64683771 64683798 -138401734 + AT_rich Low_complexity Low_complexity 1 27 0 7871 155 26 15 chr5 64683885 64686209 -138399323 + L1MA6 LINE L1 3956 6300 0 229 246 101 14 chr5 64686372 64686441 -138399091 - LTR67 LTR ERVL -94 463 389 * 373 303 116 54 chr5 64686418 64686624 -138398908 - LTR67 LTR ERVL -278 279 54 1262 268 153 18 chr5 64686624 64687080 -138398452 - LTR33 LTR ERVL -2 519 2 373 303 116 54 chr5 64687080 64687114 -138398418 - LTR67 LTR ERVL -503 54 24 206 240 72 128 chr5 64687420 64687545 -138397987 + MIR SINE MIR 30 147 -61 395 328 39 6 chr5 64687563 64687743 -138397789 - L2 LINE L2 0 3313 3128 487 264 8 8 chr5 64687843 64687964 -138397568 + L2 LINE L2 3193 3313 0 205 357 99 0 chr5 64688072 64688243 -138397289 - L2 LINE L2 -418 2896 2709 214 244 22 0 chr5 64688244 64688289 -138397243 + L3 LINE CR1 1519 1564 -13 540 292 80 98 chr5 64689637 64689986 -138395546 - LTR33 LTR ERVL -8 513 159 2461 90 3 0 chr5 64689986 64690296 -138395236 - AluSx SINE Alu -1 311 1 2678 180 63 6 chr5 64690296 64690774 -138394758 - MLT1D LTR MaLR 0 505 1 540 292 80 98 chr5 64690774 64690913 -138394619 - LTR33 LTR ERVL -360 161 33 1516 156 71 0 chr5 64691045 64691353 -138394179 - L1MC3 LINE L1 -1 7784 7455 586 251 144 5 chr5 64691959 64692174 -138393358 - MIR SINE MIR 0 262 18 182 310 35 43 chr5 64693531 64693647 -138391885 + MER5B DNA MER1_type 64 178 0 669 254 148 70 chr5 64693786 64694226 -138391306 + MLT1L LTR MaLR 142 615 0 320 290 137 0 chr5 64694337 64694468 -138391064 - MIR3 SINE MIR -6 202 54 250 347 114 42 chr5 64695422 64695615 -138389917 + MIR SINE MIR 1 207 -55 229 319 88 35 chr5 64695774 64695887 -138389645 - MER5A DNA MER1_type 0 189 71 390 330 0 40 chr5 64697575 64697775 -138387757 + MIR SINE MIR 19 210 -52 469 291 108 15 chr5 64698348 64698681 -138386851 + L1ME4a LINE L1 5462 5825 -296 312 127 12 87 chr5 64698879 64699052 -138386480 + (TCTCTG)n Simple_repeat Simple_repeat 3 162 0 1722 204 79 105 chr5 64699634 64700076 -138385456 - MLT1F1 LTR MaLR 0 567 115 2067 114 31 0 chr5 64700076 64700366 -138385166 + AluSx SINE Alu 1 299 -13 1853 109 29 11 chr5 64700370 64700645 -138384887 - AluSg SINE Alu -30 280 1 1722 204 79 105 chr5 64700645 64700779 -138384753 - MLT1F1 LTR MaLR -455 112 1 33 56 0 0 chr5 64700955 64701009 -138384523 + AT_rich Low_complexity Low_complexity 1 54 0 248 286 104 52 chr5 64701419 64701573 -138383959 - MIR SINE MIR -19 243 82 523 188 45 0 chr5 64701576 64701688 -138383844 - L2 LINE L2 0 3313 3197 355 321 137 18 chr5 64701746 64701914 -138383618 - MER5A DNA MER1_type 0 189 2 949 268 123 39 chr5 64702336 64702798 -138382734 - MLT1F1 LTR MaLR 0 567 67 1112 206 25 112 chr5 64702811 64703248 -138382284 + MLT1E2 LTR MaLR 1 399 -227 3850 221 34 10 chr5 64703262 64704357 -138381175 - L1MEc LINE L1 -2818 3328 2234 2217 129 0 0 chr5 64704361 64704670 -138380862 - AluSc SINE Alu 0 309 1 208 85 64 21 chr5 64704933 64704980 -138380552 + A-rich Low_complexity Low_complexity 5 53 0 678 340 142 31 chr5 64706246 64706433 -138379099 + L2 LINE L2 1706 1871 -1443 1097 158 16 0 chr5 64706433 64706623 -138378909 - L1PA15 LINE L1 -18 6147 5955 678 340 142 31 chr5 64706623 64707381 -138378151 + L2 LINE L2 1871 2756 -558 217 348 66 44 chr5 64707432 64707659 -138377873 + L2 LINE L2 2833 3064 -208 22 0 0 0 chr5 64708274 64708296 -138377236 + AT_rich Low_complexity Low_complexity 1 22 0 414 0 0 0 chr5 64715010 64715056 -138370476 + (TG)n Simple_repeat Simple_repeat 2 47 0 216 0 0 0 chr5 64717322 64717346 -138368186 + (CA)n Simple_repeat Simple_repeat 1 24 0 296 286 98 52 chr5 64720189 64720384 -138365148 + MIR SINE MIR 1 210 -52 713 234 85 35 chr5 64720421 64720622 -138364910 - MIR SINE MIR 0 262 52 2177 96 3 3 chr5 64720928 64721233 -138364299 + AluSx SINE Alu 1 305 0 216 316 175 9 chr5 64721708 64721822 -138363710 - MIR SINE MIR -36 172 40 1722 163 4 0 chr5 64722409 64722679 -138362853 + AluJb SINE Alu 1 271 -41 253 284 64 71 chr5 64722679 64722820 -138362712 + MER5A DNA MER1_type 43 182 -7 1368 122 14 0 chr5 64722832 64723053 -138362479 + L1MB3 LINE L1 5686 5909 -274 1704 179 6 20 chr5 64723053 64723397 -138362135 + L1MB8 LINE L1 5825 6171 -7 339 295 42 0 chr5 64723433 64723528 -138362004 - L1MC4 LINE L1 -1339 6703 6605 343 390 41 15 chr5 64723531 64723726 -138361806 - L3b LINE CR1 -94 1489 1290 347 185 0 25 chr5 64724910 64724991 -138360541 - L1MB7 LINE L1 -107 6077 5999 208 346 13 26 chr5 64725046 64725124 -138360408 + L2 LINE L2 3191 3267 -5 251 49 0 0 chr5 64725144 64725185 -138360347 - L1MA2 LINE L1 -4 6300 6260 431 282 218 10 chr5 64725922 64726128 -138359404 - MIR SINE MIR -5 257 9 212 182 127 18 chr5 64727120 64727175 -138358357 + L2 LINE L2 3231 3291 -22 5105 216 47 26 chr5 64727197 64729443 -138356089 + L1M2c LINE L1 68 2264 -4524 2113 119 3 0 chr5 64729443 64729763 -138355769 + AluSp SINE Alu 1 321 0 5105 216 47 26 chr5 64729763 64730715 -138354817 + L1M2c LINE L1 2264 3194 -3594 2420 64 3 3 chr5 64730715 64731010 -138354522 - AluY SINE Alu -16 295 1 5105 216 47 26 chr5 64731010 64731249 -138354283 + L1M2c LINE L1 3194 3426 -3362 2078 156 0 0 chr5 64731249 64731551 -138353981 + AluSx SINE Alu 1 302 -10 5105 216 47 26 chr5 64731551 64731601 -138353931 + L1M2c LINE L1 3426 4115 -2673 * 5205 133 31 8 chr5 64731595 64731627 -138353905 + L1MA5A LINE L1 5338 5368 -929 2195 129 0 3 chr5 64731627 64731937 -138353595 + AluSx SINE Alu 1 309 -3 5205 133 31 8 chr5 64731937 64732842 -138352690 + L1MA5A LINE L1 5368 6296 -1 29 28 0 0 chr5 64732842 64732878 -138352654 + AT_rich Low_complexity Low_complexity 1 36 0 620 231 15 0 chr5 64734024 64734154 -138351378 + MER94 DNA DNA 3 134 0 201 160 53 160 chr5 64734893 64734968 -138350564 + L3 LINE CR1 755 821 -756 655 199 66 18 chr5 64735657 64735750 -138349782 - MER5B DNA MER1_type -4 174 68 303 28 0 0 chr5 64735750 64735786 -138349746 + (TG)n Simple_repeat Simple_repeat 1 36 0 655 199 66 18 chr5 64735786 64735858 -138349674 - MER5B DNA MER1_type -110 68 1 195 333 65 16 chr5 64736168 64736291 -138349241 + L2 LINE L2 2685 2813 -501 301 371 88 50 chr5 64736305 64736647 -138348885 + L2 LINE L2 2918 3272 0 869 198 17 6 chr5 64737090 64737262 -138348270 - MER5B DNA MER1_type 0 178 5 24 0 0 0 chr5 64737321 64737345 -138348187 + AT_rich Low_complexity Low_complexity 1 24 0 1630 170 13 40 chr5 64737928 64738228 -138347304 + AluJo SINE Alu 1 292 -20 2222 104 3 0 chr5 64739904 64740201 -138345331 + AluY SINE Alu 1 298 -13 321 326 48 37 chr5 64740289 64740476 -138345056 - MER5A DNA MER1_type 0 189 1 * 380 321 84 9 chr5 64740476 64740795 -138344737 - L2 LINE L2 -1006 2308 1966 282 313 235 0 chr5 64740836 64740951 -138344581 + L2 LINE L2 3122 3263 -9 655 238 48 28 chr5 64742310 64742558 -138342974 - MER112 DNA MER1_type 0 256 4 282 333 49 24 chr5 64743133 64743256 -138342276 + L2 LINE L2 3147 3272 0 230 359 83 33 chr5 64743374 64743555 -138341977 - MIR SINE MIR -57 205 16 570 221 9 0 chr5 64744371 64744484 -138341048 - MER81 DNA DNA 0 114 1 4208 47 0 0 chr5 64744859 64745375 -138340157 + L1PA4 LINE L1 5640 6155 0 534 318 82 22 chr5 64745420 64745874 -138339658 - L1ME3A LINE L1 -341 5829 5346 1551 230 140 37 chr5 64747217 64747926 -138337606 - MER20B DNA MER1_type -2 782 1 537 316 109 52 chr5 64748700 64749067 -138336465 + L2 LINE L2 2872 3259 -13 189 107 0 0 chr5 64749068 64749096 -138336436 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2491 65 0 0 chr5 64749407 64749700 -138335832 + AluY SINE Alu 1 293 -18 788 126 0 0 chr5 64749835 64749946 -138335586 - FRAM SINE Alu -7 169 59 312 340 52 0 chr5 64749959 64750056 -138335476 + L2 LINE L2 3204 3305 -8 309 194 72 86 chr5 64750076 64750215 -138335317 + L1ME4a LINE L1 5980 6116 -5 266 132 19 0 chr5 64750410 64750463 -138335069 + CT-rich Low_complexity Low_complexity 1 54 0 2517 83 0 3 chr5 64751685 64751999 -138333533 - AluSp SINE Alu 0 313 1 2233 77 42 0 chr5 64752268 64752555 -138332977 - AluY SINE Alu -12 299 1 1750 155 7 7 chr5 64752723 64753019 -138332513 - AluJo SINE Alu -6 306 11 288 206 48 0 chr5 64753072 64753135 -138332397 + MER58 DNA MER1_type 2347 2412 -8 3183 216 97 14 chr5 64753288 64754193 -138331339 - L1M2 LINE L1 -5861 988 9 284 330 23 0 chr5 64754193 64754281 -138331251 - MSTC LTR MaLR -338 90 1 702 261 40 81 chr5 64754459 64754888 -138330644 - MER110 LTR ERV1 -19 472 78 960 176 102 84 chr5 64755075 64755359 -138330173 - MER110-int LTR ERV1 -67 4580 4292 398 202 11 56 chr5 64755383 64755472 -138330060 + MER58A DNA MER1_type 4 88 -19 2271 119 0 6 chr5 64755545 64755857 -138329675 - AluSx SINE Alu -2 310 1 3022 243 126 48 chr5 64755900 64757138 -138328394 - L1MEc LINE L1 -5028 1368 35 1053 229 51 127 chr5 64757690 64758238 -138327294 - MER110 LTR ERV1 0 468 5 240 261 26 70 chr5 64758258 64758373 -138327159 + MIR3 SINE MIR 14 123 -85 1625 181 147 6 chr5 64758581 64758901 -138326631 + MLT1A1 LTR MaLR 1 365 0 435 264 112 48 chr5 64759528 64759713 -138325819 + L1ME1 LINE L1 5901 6108 -58 3862 136 54 65 chr5 64759713 64760448 -138325084 - LTR8A LTR ERV1 0 727 1 435 264 112 48 chr5 64760448 64760512 -138325020 + L1ME1 LINE L1 6108 6166 0 790 156 71 13 chr5 64760633 64760787 -138324745 - MER46B DNA MER2_type 0 236 74 1651 142 45 31 chr5 64760787 64761308 -138324224 - LTR59 LTR ERV1 -6 591 4 1236 120 106 5 chr5 64761308 64761502 -138324030 - MER46B DNA MER2_type -146 90 1 1873 99 86 53 chr5 64762797 64763100 -138322432 - AluSq SINE Alu 0 313 1 1596 314 103 19 chr5 64763356 64764292 -138321240 + HAL1 LINE L1 1 1014 -1493 3542 246 109 35 chr5 64765586 64767021 -138318511 + L1M2b LINE L1 68 1680 -5529 2505 154 43 33 chr5 64767018 64767504 -138318028 + L1MA4A LINE L1 4837 5336 -894 * 1900 155 7 0 chr5 64767504 64767794 -138317738 + AluSx SINE Alu 1 292 -20 2505 154 43 33 chr5 64767794 64767948 -138317584 + L1MA4A LINE L1 5336 5487 -743 774 189 0 49 chr5 64767955 64768098 -138317434 + FAM SINE Alu 20 155 -30 4614 128 40 9 chr5 64768120 64768899 -138316633 + L1MA4A LINE L1 5479 6281 -22 31936 106 14 60 chr5 64769282 64775726 -138309806 - L1PA7 LINE L1 -8 6146 14 2417 99 0 0 chr5 64775737 64776041 -138309491 - AluSx SINE Alu -8 304 1 186 319 151 42 chr5 64776346 64776465 -138309067 + MIR SINE MIR 20 151 -111 1903 174 0 13 chr5 64776565 64776881 -138308651 - AluJo SINE Alu 0 312 1 344 283 139 6 chr5 64778270 64778443 -138307089 + MER112 DNA MER1_type 64 259 -1 214 219 97 75 chr5 64778457 64778591 -138306941 - MIR SINE MIR -56 206 71 2056 198 49 12 chr5 64778685 64779094 -138306438 + MSTB LTR MaLR 1 424 -2 916 281 109 37 chr5 64779095 64779654 -138305878 - MLT1L LTR MaLR 0 511 7 301 282 56 0 chr5 64779934 64780005 -138305527 - L2 LINE L2 -26 3246 3172 597 276 52 0 chr5 64781033 64781207 -138304325 - MER5A DNA MER1_type 0 189 7 2167 107 10 13 chr5 64781313 64781613 -138303919 + AluSx SINE Alu 1 299 -13 293 281 0 37 chr5 64783187 64783269 -138302263 + MIR SINE MIR 81 159 -103 1831 171 78 20 chr5 64783842 64784187 -138301345 - MLT1A1 LTR MaLR 0 365 1 568 248 168 25 chr5 64785317 64785555 -138299977 - L2 LINE L2 -8 3305 3034 470 276 68 97 chr5 64785562 64785902 -138299630 + L2 LINE L2 2857 3186 -86 234 0 0 0 chr5 64786559 64786585 -138298947 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 21 57 0 0 chr5 64787424 64787459 -138298073 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 64791997 64792025 -138293507 + AT_rich Low_complexity Low_complexity 1 28 0 286 243 286 29 chr5 64793621 64793761 -138291771 + MIR3 SINE MIR 15 190 -18 1602 134 4 8 chr5 64794295 64794557 -138290975 + AluJo SINE Alu 47 307 0 180 239 55 92 chr5 64795275 64795384 -138290148 + L3 LINE CR1 1325 1429 -148 6430 154 61 42 chr5 64795487 64796704 -138288828 - ERVL LTR ERVL -1549 4215 2941 495 274 57 65 chr5 64796996 64797226 -138288306 + L2 LINE L2 3081 3308 -5 1779 137 14 21 chr5 64797667 64797976 -138287556 - AluSq SINE Alu 0 307 1 239 179 21 147 chr5 64799030 64799125 -138286407 - MER5A DNA MER1_type 0 189 107 2312 118 0 51 chr5 64799163 64799518 -138286014 + MER1B DNA MER1_type 1 337 0 33 80 0 0 chr5 64801588 64801663 -138283869 + AT_rich Low_complexity Low_complexity 1 75 0 1153 129 5 45 chr5 64801735 64801936 -138283596 - MER20 DNA MER1_type 0 219 27 22 0 0 0 chr5 64802907 64802929 -138282603 + AT_rich Low_complexity Low_complexity 1 22 0 2016 114 0 28 chr5 64803376 64803696 -138281836 + AluSx SINE Alu 1 312 0 249 343 157 0 chr5 64805349 64805457 -138280075 + L2 LINE L2 3148 3272 0 906 221 10 10 chr5 64805966 64806174 -138279358 + MER3 DNA MER1_type 1 208 -1 971 48 0 0 chr5 64807203 64807329 -138278203 - L1PA5 LINE L1 -102 6052 5927 277 26 0 0 chr5 64807326 64807365 -138278167 + L1PA6 LINE L1 6113 6151 -3 * 210 37 0 0 chr5 64807380 64807407 -138278125 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 346 206 193 54 chr5 64807519 64807742 -138277790 - L1ME4a LINE L1 -5 6116 5863 198 324 54 0 chr5 64807862 64807936 -138277596 + MIR SINE MIR 169 246 -16 * 219 91 30 0 chr5 64807910 64807943 -138277589 + L2 LINE L2 3266 3299 -14 3319 61 9 0 chr5 64808209 64808634 -138276898 + L1PA7 LINE L1 5725 6153 -1 23 0 0 0 chr5 64809711 64809734 -138275798 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 64817332 64817361 -138268171 + AT_rich Low_complexity Low_complexity 1 29 0 2179 111 0 0 chr5 64817368 64817665 -138267867 + AluY SINE Alu 1 297 -14 6505 29 1 0 chr5 64817684 64818444 -138267088 - L1PA5 LINE L1 -2 6152 5392 24 53 0 0 chr5 64818867 64818905 -138266627 + AT_rich Low_complexity Low_complexity 1 38 0 254 200 0 18 chr5 64819075 64819130 -138266402 - MIR SINE MIR -3 259 206 * 267 261 118 25 chr5 64819083 64819202 -138266330 - L2 LINE L2 -16 3297 3168 2400 84 3 10 chr5 64819397 64819706 -138265826 + AluSp SINE Alu 1 307 -6 202 333 79 36 chr5 64819810 64819975 -138265557 - L2 LINE L2 -510 2804 2633 273 304 0 0 chr5 64820392 64820471 -138265061 + (TG)n Simple_repeat Simple_repeat 2 80 0 276 30 0 0 chr5 64820546 64820579 -138264953 + (TG)n Simple_repeat Simple_repeat 2 34 0 234 0 0 0 chr5 64820665 64820691 -138264841 + (TG)n Simple_repeat Simple_repeat 1 26 0 193 321 122 38 chr5 64821054 64821185 -138264347 + MIR SINE MIR 51 192 -70 320 330 173 6 chr5 64821526 64821699 -138263833 - L2 LINE L2 -489 2825 2624 1562 195 55 6 chr5 64821816 64822164 -138263368 + MLT1A1 LTR MaLR 1 365 0 218 235 44 15 chr5 64822539 64822607 -138262925 + MIR3 SINE MIR 138 207 -1 230 218 55 0 chr5 64823342 64823397 -138262135 + L2 LINE L2 3213 3270 -2 2279 102 3 13 chr5 64824197 64824510 -138261022 + AluSq SINE Alu 1 310 -3 286 303 70 50 chr5 64824888 64824989 -138260543 + MIR SINE MIR 6 107 -102 249 322 56 0 chr5 64825019 64825109 -138260423 + MIR SINE MIR 164 258 -4 1783 145 45 7 chr5 64825307 64825597 -138259935 + AluSx SINE Alu 3 303 -9 307 314 64 19 chr5 64825781 64825937 -138259595 - MER103 DNA DNA -1 165 3 204 244 0 0 chr5 64826141 64826182 -138259350 + CT-rich Low_complexity Low_complexity 2 42 0 469 242 60 30 chr5 64826832 64826987 -138258545 + MIR SINE MIR 16 181 -27 366 23 0 0 chr5 64827578 64827621 -138257911 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 104 0 0 chr5 64827847 64827887 -138257645 + (T)n Simple_repeat Simple_repeat 1 43 -5 1214 153 161 16 chr5 64827887 64828141 -138257391 + AluSg1 SINE Alu 1 291 -18 261 104 0 0 chr5 64828141 64828148 -138257384 + (T)n Simple_repeat Simple_repeat 42 48 0 24 32 0 0 chr5 64828801 64828832 -138256700 + AT_rich Low_complexity Low_complexity 1 31 0 405 233 98 15 chr5 64828902 64829035 -138256497 + MER112 DNA MER1_type 85 228 -32 21 0 0 0 chr5 64829525 64829546 -138255986 + AT_rich Low_complexity Low_complexity 1 21 0 3003 68 5 2 chr5 64830645 64831042 -138254490 - L1PA8 LINE L1 0 6172 5775 500 265 93 47 chr5 64831477 64831692 -138253840 + MIR SINE MIR 18 242 -20 287 362 64 14 chr5 64832219 64832360 -138253172 + L2 LINE L2 3124 3271 -1 1239 251 37 82 chr5 64834076 64834611 -138250921 + MLT1J LTR MaLR 1 511 0 253 286 57 0 chr5 64834675 64834745 -138250787 + L2 LINE L2 2279 2352 -962 739 96 52 0 chr5 64834748 64834863 -138250669 - L1PA15 LINE L1 -7 6158 6038 392 248 148 0 chr5 64835560 64835661 -138249871 + L2 LINE L2 3197 3312 -1 532 278 15 85 chr5 64836712 64836982 -138248550 + L1MC4 LINE L1 7791 8041 -1 194 227 0 15 chr5 64838335 64838401 -138247131 + GA-rich Low_complexity Low_complexity 4 68 0 22 35 0 0 chr5 64838510 64838539 -138246993 + AT_rich Low_complexity Low_complexity 1 29 0 3152 172 31 30 chr5 64839140 64839301 -138246231 + L1MA10 LINE L1 5619 5778 -556 417 39 0 0 chr5 64839301 64839352 -138246180 + (CA)n Simple_repeat Simple_repeat 2 52 0 3152 172 31 30 chr5 64839352 64839830 -138245702 + L1MA10 LINE L1 5778 6259 -75 355 315 90 88 chr5 64840318 64840661 -138244871 - L2 LINE L2 0 3272 2929 2144 136 14 24 chr5 64840880 64841209 -138244323 + MLT1A1 LTR MaLR 1 328 -37 1691 180 0 7 chr5 64841209 64841542 -138243990 - AluSx SINE Alu 0 331 1 2144 136 14 24 chr5 64841542 64841580 -138243952 + MLT1A1 LTR MaLR 328 365 0 308 322 68 0 chr5 64842630 64842748 -138242784 - L2 LINE L2 -2 3311 3186 308 344 55 0 chr5 64842935 64843098 -138242434 + MIR SINE MIR 20 191 -71 410 357 28 6 chr5 64843147 64843329 -138242203 - L2 LINE L2 -217 3055 2870 25 51 0 0 chr5 64843990 64844029 -138241503 + AT_rich Low_complexity Low_complexity 1 39 0 518 205 0 81 chr5 64844037 64844198 -138241334 - L1ME4a LINE L1 -5 6116 5969 434 327 13 0 chr5 64844220 64844373 -138241159 - L1ME LINE L1 -474 5647 5493 3617 252 147 50 chr5 64844479 64845902 -138239630 - HAL1 LINE L1 -2 2505 876 2348 99 0 6 chr5 64845902 64846216 -138239316 - AluSx SINE Alu 0 312 1 3617 252 147 50 chr5 64846216 64846563 -138238969 - HAL1 LINE L1 -1631 876 564 341 286 41 10 chr5 64846563 64846661 -138238871 - L2 LINE L2 -9 3304 3204 319 311 66 0 chr5 64846665 64846787 -138238745 - HAL1 LINE L1 -1943 564 435 * 381 207 11 0 chr5 64846771 64846858 -138238674 - HAL1 LINE L1 -2324 183 96 347 317 81 98 chr5 64847321 64847791 -138237741 - L2 LINE L2 -4 3268 2807 740 273 123 11 chr5 64847821 64848323 -138237209 + MLT1L LTR MaLR 7 598 -17 299 273 80 91 chr5 64848650 64848703 -138236829 - MIR3 SINE MIR 0 208 156 1612 191 7 7 chr5 64848703 64848997 -138236535 + AluSx SINE Alu 1 294 -18 299 273 80 91 chr5 64848997 64849119 -138236413 - MIR3 SINE MIR -52 156 35 441 0 0 0 chr5 64849302 64849351 -138236181 + (CA)n Simple_repeat Simple_repeat 2 50 0 537 302 95 14 chr5 64851234 64851456 -138234076 + MIR SINE MIR 8 247 -15 1269 110 28 0 chr5 64851688 64851870 -138233662 - AluSg/x SINE Alu -1 308 122 647 157 317 86 chr5 64852020 64852288 -138233244 + MLT2B1 LTR ERVL 191 520 0 419 269 64 14 chr5 64852671 64852812 -138232720 + MIR SINE MIR 10 157 -105 342 236 113 0 chr5 64852945 64853051 -138232481 + MIR SINE MIR 136 253 -9 285 286 159 23 chr5 64854217 64854437 -138231095 + L1MC4a LINE L1 5670 5919 -1889 1526 170 70 82 chr5 64854510 64854592 -138230940 + MSTD LTR MaLR 1 83 -313 1753 178 0 20 chr5 64854592 64854896 -138230636 - AluJb SINE Alu -13 299 2 1526 170 70 82 chr5 64854896 64855214 -138230318 + MSTD LTR MaLR 83 396 0 243 277 73 22 chr5 64855383 64855520 -138230012 - L1ME4a LINE L1 -31 6090 5947 1184 195 66 4 chr5 64855626 64855749 -138229783 + AluJo SINE Alu 1 115 -197 243 0 0 0 chr5 64855749 64855776 -138229756 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1184 195 66 4 chr5 64855776 64855893 -138229639 + AluJo SINE Alu 115 256 -56 489 76 0 0 chr5 64855900 64855966 -138229566 + (GGAGA)n Simple_repeat Simple_repeat 5 70 0 2001 129 65 17 chr5 64857888 64858244 -138227288 + THE1C LTR MaLR 3 375 0 543 317 103 28 chr5 64858362 64858820 -138226712 + L1ME4a LINE L1 4067 4558 -1588 749 271 132 55 chr5 64858915 64859499 -138226033 - HAL1 LINE L1 -592 1915 1287 314 326 75 19 chr5 64859536 64859803 -138225729 - HAL1 LINE L1 -1304 1203 922 302 278 139 0 chr5 64859860 64859968 -138225564 - HAL1 LINE L1 -1574 933 811 243 231 66 58 chr5 64860037 64860158 -138225374 + L1ME4a LINE L1 4581 4702 -1444 22 0 0 0 chr5 64860484 64860506 -138225026 + AT_rich Low_complexity Low_complexity 1 22 0 808 141 0 15 chr5 64860690 64860825 -138224707 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr5 64860858 64860881 -138224651 + AT_rich Low_complexity Low_complexity 1 23 0 670 259 81 51 chr5 64861037 64861430 -138224102 + L1ME4a LINE L1 5531 5935 -186 709 259 29 0 chr5 64862132 64862302 -138223230 - MIR SINE MIR -86 176 2 432 328 234 18 chr5 64862481 64863033 -138222499 + L2 LINE L2 1994 2664 -650 1859 160 6 10 chr5 64863288 64863600 -138221932 + AluJo SINE Alu 1 311 -1 181 266 202 32 chr5 64864080 64864174 -138221358 + L2 LINE L2 3204 3313 0 209 182 0 0 chr5 64864330 64864363 -138221169 + polypyrimidine Low_complexity Low_complexity 2 34 0 3550 238 37 0 chr5 64864413 64865032 -138220500 + L1PA13 LINE L1 5520 6161 -2 210 37 0 0 chr5 64865255 64865282 -138220250 + (TTG)n Simple_repeat Simple_repeat 1 27 0 750 206 171 31 chr5 64865520 64865748 -138219784 - MIR SINE MIR -1 261 2 282 56 0 0 chr5 64866873 64866909 -138218623 + (T)n Simple_repeat Simple_repeat 1 36 0 968 268 112 31 chr5 64867235 64867779 -138217753 + L1ME3A LINE L1 5375 5962 -208 28 91 0 0 chr5 64867940 64868017 -138217515 + AT_rich Low_complexity Low_complexity 1 77 0 476 290 212 14 chr5 64868790 64869007 -138216525 + MIR SINE MIR 2 261 -1 423 336 150 58 chr5 64869109 64869696 -138215836 + HAL1 LINE L1 1 641 -1866 226 224 0 20 chr5 64869794 64869843 -138215689 + HAL1 LINE L1 751 798 -1709 312 293 106 43 chr5 64869924 64870112 -138215420 + HAL1 LINE L1 840 1039 -1468 1814 166 23 19 chr5 64871447 64871755 -138213777 + AluJb SINE Alu 3 311 -1 400 241 14 97 chr5 64871788 64871933 -138213599 - MLT1J LTR MaLR -109 402 270 322 309 48 24 chr5 64872204 64872330 -138213202 - MIR3 SINE MIR -48 160 32 188 274 39 0 chr5 64873375 64873426 -138212106 + L2 LINE L2 2925 2977 -337 225 344 177 0 chr5 64873595 64873691 -138211841 + L2 LINE L2 3160 3272 0 2433 82 3 0 chr5 64875112 64875416 -138210116 - AluSp SINE Alu -8 305 1 714 158 13 59 chr5 64875685 64875837 -138209695 + MER5A DNA MER1_type 1 145 -44 634 242 152 49 chr5 64876395 64876639 -138208893 + Charlie8 DNA MER1_type 4 272 -2145 237 279 177 34 chr5 64876917 64877064 -138208468 + MIR SINE MIR 36 203 -59 461 272 124 23 chr5 64877214 64877431 -138208101 - MIR SINE MIR 0 262 24 185 367 20 60 chr5 64877447 64877597 -138207935 + MER5A DNA MER1_type 17 160 -29 326 190 0 52 chr5 64877681 64877797 -138207735 + GA-rich Low_complexity Low_complexity 2 111 0 216 240 400 8 chr5 64878721 64878846 -138206686 - MER5A DNA MER1_type -2 187 14 2150 106 10 0 chr5 64879512 64879814 -138205718 + AluSp SINE Alu 1 305 -8 207 69 0 0 chr5 64880139 64880168 -138205364 + (TG)n Simple_repeat Simple_repeat 2 30 0 2142 136 10 0 chr5 64880231 64880539 -138204993 - AluSx SINE Alu 0 312 2 570 278 128 65 chr5 64880778 64881177 -138204355 + MLT1H LTR MaLR 125 548 -1 237 294 0 0 chr5 64881465 64881516 -138204016 + (TG)n Simple_repeat Simple_repeat 1 51 0 2182 98 0 46 chr5 64881643 64881968 -138203564 + AluSx SINE Alu 1 310 -2 432 0 0 0 chr5 64881987 64882035 -138203497 + (TG)n Simple_repeat Simple_repeat 1 48 0 266 275 61 23 chr5 64882083 64882214 -138203318 + MER112 DNA MER1_type 124 259 -1 323 292 55 30 chr5 64882226 64882428 -138203104 - L2 LINE L2 -6 3307 3101 673 237 113 10 chr5 64883517 64883621 -138201911 - MIR SINE MIR -34 228 136 1826 179 3 0 chr5 64883621 64883923 -138201609 + AluJb SINE Alu 1 303 -9 673 237 113 10 chr5 64883923 64884012 -138201520 - MIR SINE MIR -126 136 15 1624 296 98 17 chr5 64884863 64885760 -138199772 - L2 LINE L2 0 3313 2354 361 242 8 8 chr5 64885762 64885824 -138199708 + CT-rich Low_complexity Low_complexity 3 64 -70 2204 84 0 0 chr5 64885824 64886097 -138199435 - AluSp SINE Alu -6 307 35 361 242 8 8 chr5 64886097 64886166 -138199366 + CT-rich Low_complexity Low_complexity 63 134 0 797 233 94 5 chr5 64886704 64886927 -138198605 + MIR SINE MIR 8 250 -12 479 352 162 21 chr5 64887405 64888153 -138197379 - L2 LINE L2 -896 2418 1566 22 35 0 0 chr5 64888928 64888957 -138196575 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 64889083 64889112 -138196420 + AT_rich Low_complexity Low_complexity 1 29 0 412 174 0 70 chr5 64890761 64890847 -138194685 - MER63 DNA MER1_type -87 749 44 197 317 138 14 chr5 64891343 64891488 -138194044 + L2 LINE L2 3139 3301 -12 192 77 0 0 chr5 64892234 64892260 -138193272 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1464 203 44 0 chr5 64892887 64893158 -138192374 - AluJo SINE Alu -25 287 5 186 378 63 16 chr5 64893414 64893541 -138191991 - L2 LINE L2 0 3272 3140 5748 127 47 62 chr5 64893628 64894894 -138190638 + L1MA4A LINE L1 4559 5782 -521 2333 102 0 0 chr5 64894894 64895199 -138190333 + AluSg SINE Alu 1 305 -5 5748 127 47 62 chr5 64895199 64895706 -138189826 + L1MA4A LINE L1 5782 6295 -8 861 145 7 0 chr5 64895716 64895868 -138189664 - L1MB5 LINE L1 -10 6164 6012 207 200 0 0 chr5 64896048 64896093 -138189439 + T-rich Low_complexity Low_complexity 1 45 0 572 238 28 35 chr5 64896825 64896968 -138188564 + MIR SINE MIR 1 142 -120 240 35 0 0 chr5 64897999 64898028 -138187504 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 213 39 0 0 chr5 64899140 64899166 -138186366 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 396 155 0 0 chr5 64899160 64899231 -138186301 + GA-rich Low_complexity Low_complexity 4 74 0 342 0 0 0 chr5 64901046 64901084 -138184448 + (TG)n Simple_repeat Simple_repeat 2 39 0 376 328 98 23 chr5 64901869 64902043 -138183489 - MIR3 SINE MIR -6 202 16 907 123 8 8 chr5 64902302 64902432 -138183100 - FLAM_C SINE Alu -12 131 2 658 242 111 22 chr5 64902766 64903006 -138182526 + MIR SINE MIR 7 262 0 250 288 41 14 chr5 64903998 64904071 -138181461 + MER91A DNA MER1_type 87 161 -35 295 310 150 0 chr5 64904281 64904394 -138181138 + L2 LINE L2 3137 3266 -6 423 0 0 0 chr5 64904626 64904673 -138180859 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 64905553 64905582 -138179950 + AT_rich Low_complexity Low_complexity 1 29 0 468 287 236 5 chr5 64906321 64906516 -138179016 + MIR SINE MIR 5 244 -18 270 0 0 0 chr5 64907029 64907059 -138178473 + (TTG)n Simple_repeat Simple_repeat 1 30 0 228 300 133 0 chr5 64908705 64908795 -138176737 - L2 LINE L2 0 3313 3212 258 358 0 0 chr5 64908921 64908988 -138176544 - L2 LINE L2 -1 3271 3205 380 282 115 56 chr5 64909307 64909701 -138175831 + L1MC4a LINE L1 5491 5603 -518 232 271 43 0 chr5 64909728 64909798 -138175734 - MER117 DNA MER1_type -121 76 4 709 186 0 0 chr5 64909962 64910075 -138175457 - MER81 DNA DNA 0 114 2 2513 66 0 0 chr5 64910567 64910871 -138174661 - AluY SINE Alu -7 304 1 1854 117 4 0 chr5 64911326 64911582 -138173950 - AluSg SINE Alu -5 305 49 265 256 155 16 chr5 64912253 64912382 -138173150 - MIR SINE MIR -11 251 105 1498 147 90 54 chr5 64912544 64912823 -138172709 - AluJb SINE Alu -21 291 3 273 328 0 0 chr5 64914412 64914479 -138171053 - MIR SINE MIR -85 123 57 2013 84 70 4 chr5 64915700 64915973 -138169559 + AluSg SINE Alu 1 291 -19 27 29 0 0 chr5 64916054 64916088 -138169444 + AT_rich Low_complexity Low_complexity 1 34 0 575 194 0 8 chr5 64916144 64916278 -138169254 + CT-rich Low_complexity Low_complexity 4 136 0 380 306 228 10 chr5 64916461 64916667 -138168865 + MIR SINE MIR 2 252 -10 380 342 36 10 chr5 64917228 64917424 -138168108 + MIR3 SINE MIR 3 203 -5 302 357 58 31 chr5 64918148 64918372 -138167160 - MIR SINE MIR -13 249 20 2259 109 0 0 chr5 64918892 64919185 -138166347 + AluSx SINE Alu 1 293 -19 2044 130 76 6 chr5 64919924 64920239 -138165293 + MER1B DNA MER1_type 1 337 0 193 267 0 0 chr5 64921447 64921492 -138164040 + MIR SINE MIR 108 152 -110 315 297 69 28 chr5 64921498 64921643 -138163889 + MIR SINE MIR 112 262 0 396 40 0 0 chr5 64921802 64921852 -138163680 + (TG)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 64922754 64922777 -138162755 + (T)n Simple_repeat Simple_repeat 1 23 0 268 308 25 25 chr5 64923580 64923700 -138161832 + L2 LINE L2 3191 3310 -3 248 286 23 41 chr5 64924905 64925076 -138160456 + GA-rich Low_complexity Low_complexity 3 170 0 584 275 111 19 chr5 64925099 64925306 -138160226 + MIR SINE MIR 8 233 -29 431 331 127 55 chr5 64927525 64927668 -138157864 - L2 LINE L2 -671 2643 2512 1998 142 3 10 chr5 64927668 64927957 -138157575 + AluSx SINE Alu 1 287 -25 431 331 127 55 chr5 64927957 64929288 -138156244 - L2 LINE L2 -802 2512 1063 22 0 0 0 chr5 64929371 64929393 -138156139 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr5 64929393 64929438 -138156094 + (TG)n Simple_repeat Simple_repeat 2 46 0 805 298 22 32 chr5 64929460 64929775 -138155757 + MLT1J LTR MaLR 147 458 -53 33 25 0 0 chr5 64929775 64929815 -138155717 + AT_rich Low_complexity Low_complexity 1 40 0 415 281 105 35 chr5 64931720 64931891 -138153641 - MIR3 SINE MIR -6 202 20 1695 144 19 16 chr5 64932238 64932495 -138153037 - AluJb SINE Alu -49 263 6 734 194 0 0 chr5 64933584 64933708 -138151824 - FLAM_C SINE Alu -16 127 4 200 233 0 0 chr5 64933709 64933752 -138151780 - MER5B DNA MER1_type -134 44 2 2256 89 4 0 chr5 64933883 64934163 -138151369 + AluSg SINE Alu 1 281 -29 3166 127 68 32 chr5 64934205 64934794 -138150738 - MER4B LTR ERV1 0 610 1 1811 145 3 51 chr5 64935624 64935935 -138149597 + AluJb SINE Alu 1 296 -16 321 73 0 0 chr5 64935956 64935997 -138149535 - LTR23 LTR ERV1 -76 361 321 1773 119 36 50 chr5 64936013 64936315 -138149217 - AluSx SINE Alu -14 298 1 2230 81 20 3 chr5 64936343 64936638 -138148894 - AluSp SINE Alu -13 300 1 514 286 88 26 chr5 64937458 64937650 -138147882 - MIR SINE MIR -3 259 56 22 0 0 0 chr5 64938156 64938178 -138147354 + AT_rich Low_complexity Low_complexity 1 22 0 591 297 19 68 chr5 64938284 64938347 -138147185 - MIR SINE MIR -5 257 192 2205 122 0 7 chr5 64938347 64938643 -138146889 - AluSx SINE Alu -18 294 1 591 297 19 68 chr5 64938643 64938845 -138146687 - MIR SINE MIR -70 192 5 611 271 75 73 chr5 64939599 64940024 -138145508 - MARNA DNA Mariner -84 502 77 21 0 0 0 chr5 64940025 64940046 -138145486 + AT_rich Low_complexity Low_complexity 1 21 0 408 275 85 43 chr5 64940108 64940319 -138145213 - MIR SINE MIR -23 239 20 187 324 29 15 chr5 64940887 64940955 -138144577 + L2 LINE L2 3227 3295 -18 216 0 0 0 chr5 64941141 64941165 -138144367 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 240 228 0 0 chr5 64941735 64941792 -138143740 + GA-rich Low_complexity Low_complexity 2 58 0 413 335 108 0 chr5 64941890 64942084 -138143448 + MIR SINE MIR 48 262 0 265 272 68 75 chr5 64942871 64943018 -138142514 + MER5A DNA MER1_type 44 189 0 1554 179 57 7 chr5 64943103 64943383 -138142149 - AluJo SINE Alu -18 294 1 29 60 0 0 chr5 64943781 64943831 -138141701 + AT_rich Low_complexity Low_complexity 1 50 0 2448 83 0 0 chr5 64943948 64944248 -138141284 - AluSq SINE Alu -13 300 1 221 151 65 7 chr5 64944835 64944974 -138140558 + (TA)n Simple_repeat Simple_repeat 1 147 0 25 31 0 0 chr5 64944983 64945015 -138140517 + AT_rich Low_complexity Low_complexity 1 32 0 548 81 81 0 chr5 64945021 64945182 -138140350 + (TA)n Simple_repeat Simple_repeat 1 174 0 373 95 69 0 chr5 64945195 64945311 -138140221 + (TA)n Simple_repeat Simple_repeat 2 125 0 1677 167 0 43 chr5 64945327 64945626 -138139906 + AluJb SINE Alu 3 288 -24 31 0 0 0 chr5 64945626 64945657 -138139875 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr5 64945807 64945830 -138139702 + AT_rich Low_complexity Low_complexity 1 23 0 222 304 7 31 chr5 64945835 64945992 -138139540 - MIR SINE MIR 0 262 52 247 341 167 0 chr5 64947686 64947818 -138137714 + MIR3 SINE MIR 19 172 -36 2350 92 3 0 chr5 64948384 64948690 -138136842 - AluSg1 SINE Alu -2 307 1 682 203 7 43 chr5 64948701 64948839 -138136693 - FLAM_A SINE Alu 0 133 1 239 270 112 0 chr5 64948853 64948942 -138136590 - MIR SINE MIR -56 206 108 2366 92 0 7 chr5 64949180 64949483 -138136049 + AluSq SINE Alu 1 301 -12 770 195 22 33 chr5 64949965 64950278 -138135254 + MLT1A1 LTR MaLR 1 363 -2 512 295 88 5 chr5 64950349 64950542 -138134990 - MIR SINE MIR -10 252 44 2161 99 24 0 chr5 64952019 64952311 -138133221 - AluSx SINE Alu -13 299 1 217 259 37 62 chr5 64954244 64954325 -138131207 + L2 LINE L2 3226 3304 -9 286 74 37 0 chr5 64954453 64954507 -138131025 + (TA)n Simple_repeat Simple_repeat 2 57 0 589 341 78 9 chr5 64954524 64954741 -138130791 - MIR SINE MIR -10 252 21 21 57 0 0 chr5 64955013 64955048 -138130484 + AT_rich Low_complexity Low_complexity 1 35 0 1231 132 5 47 chr5 64955164 64955376 -138130156 - AluJo SINE Alu -13 299 97 237 272 141 0 chr5 64956752 64956844 -138128688 - L2 LINE L2 -46 3226 3122 199 305 18 104 chr5 64956971 64957135 -138128397 - L2 LINE L2 -219 3053 2904 338 260 42 0 chr5 64958720 64958816 -138126716 + L2 LINE L2 3214 3313 0 774 249 32 5 chr5 64959128 64959317 -138126215 + MIR SINE MIR 61 254 -8 27 103 0 0 chr5 64960143 64960240 -138125292 + AT_rich Low_complexity Low_complexity 1 97 0 242 188 78 16 chr5 64961716 64961780 -138123752 - MER116 DNA Mariner -5 75 8 956 77 0 0 chr5 64962146 64962276 -138123256 - AluSp/q SINE Alu 0 313 184 248 283 81 50 chr5 64962781 64962880 -138122652 + L3b LINE CR1 1351 1452 -131 255 269 19 19 chr5 64963150 64963258 -138122274 + L1ME4a LINE L1 5956 6063 -58 31 26 0 0 chr5 64964286 64964324 -138121208 + AT_rich Low_complexity Low_complexity 1 38 0 2299 101 7 7 chr5 64964472 64964780 -138120752 - AluSx SINE Alu -4 308 1 365 328 96 0 chr5 64965232 64965409 -138120123 - MIR SINE MIR -32 230 37 290 250 0 26 chr5 64965414 64965490 -138120042 - MIR3 SINE MIR -46 162 89 217 317 98 24 chr5 64965527 64965650 -138119882 - L3b LINE CR1 -144 1439 1308 603 293 29 6 chr5 64965659 64965833 -138119699 - MER5B DNA MER1_type 0 178 1 25 0 0 0 chr5 64966314 64966339 -138119193 + AT_rich Low_complexity Low_complexity 1 25 0 324 236 129 36 chr5 64967602 64967742 -138117790 - MIR SINE MIR -52 210 58 1549 230 19 25 chr5 64967761 64968130 -138117402 + MSTD LTR MaLR 34 396 0 855 229 40 10 chr5 64968504 64968705 -138116827 + MIR SINE MIR 46 252 -10 405 276 34 16 chr5 64969092 64969227 -138116305 - MIR SINE MIR -61 147 42 360 148 0 0 chr5 64971221 64971282 -138114250 + (TATG)n Simple_repeat Simple_repeat 4 64 0 627 217 0 16 chr5 64972167 64972296 -138113236 - FLAM_A SINE Alu -10 132 6 28 29 0 0 chr5 64972413 64972448 -138113084 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 64972570 64972598 -138112934 + AT_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr5 64972732 64972759 -138112773 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 232 237 0 43 chr5 64972763 64972856 -138112676 - L1MC4 LINE L1 -1339 6703 6615 583 185 17 34 chr5 64972856 64973034 -138112498 + (CATA)n Simple_repeat Simple_repeat 1 175 0 375 313 0 0 chr5 64973006 64973185 -138112347 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 312 309 0 0 chr5 64973195 64973279 -138112253 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 363 310 0 0 chr5 64973281 64973602 -138111930 + (CATATA)n Simple_repeat Simple_repeat 1 321 0 239 158 53 53 chr5 64973617 64973693 -138111839 - L1MCa LINE L1 -4358 2068 1993 26 0 0 0 chr5 64974005 64974031 -138111501 + AT_rich Low_complexity Low_complexity 1 26 0 2454 65 0 7 chr5 64974943 64975249 -138110283 - AluY SINE Alu -7 304 1 21 36 0 0 chr5 64975259 64975287 -138110245 + AT_rich Low_complexity Low_complexity 1 28 0 824 182 0 8 chr5 64975294 64975426 -138110106 - FRAM SINE Alu -35 141 11 1954 155 9 29 chr5 64975476 64975817 -138109715 + THE1B LTR MaLR 31 364 0 455 146 15 0 chr5 64975872 64975970 -138109562 + L1MA8 LINE L1 5254 5358 -954 808 168 0 0 chr5 64975971 64976096 -138109436 + FLAM_C SINE Alu 1 125 -18 4971 136 32 34 chr5 64976103 64976534 -138108998 + L1MA8 LINE L1 5350 5780 -511 180 0 0 0 chr5 64976534 64976554 -138108978 + (CA)n Simple_repeat Simple_repeat 2 21 0 4971 136 32 34 chr5 64976554 64977065 -138108467 + L1MA8 LINE L1 5780 6290 -1 278 282 118 29 chr5 64977841 64978011 -138107521 - MIR SINE MIR -14 248 64 21 36 0 0 chr5 64978197 64978225 -138107307 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr5 64978563 64978609 -138106923 + (CA)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr5 64979522 64979543 -138105989 + AT_rich Low_complexity Low_complexity 1 21 0 1771 184 3 16 chr5 64979810 64980115 -138105417 + AluJo SINE Alu 1 301 -11 23 54 0 0 chr5 64980670 64980707 -138104825 + AT_rich Low_complexity Low_complexity 1 37 0 1960 117 0 31 chr5 64980805 64981096 -138104436 + AluSx SINE Alu 21 302 -10 2003 155 0 0 chr5 64982099 64982395 -138103137 - AluJb SINE Alu -16 296 1 1136 235 49 13 chr5 64982437 64982881 -138102651 - MER119 DNA MER1_type 0 583 27 258 307 72 33 chr5 64984521 64984674 -138100858 + MIR SINE MIR 104 262 0 22 35 0 0 chr5 64985513 64985542 -138099990 + AT_rich Low_complexity Low_complexity 1 29 0 253 98 20 20 chr5 64986012 64986063 -138099469 + (TTC)n Simple_repeat Simple_repeat 3 53 0 1194 169 18 27 chr5 64986065 64986290 -138099242 - AluJo SINE Alu -8 304 82 414 0 0 0 chr5 64986942 64986988 -138098544 + (CA)n Simple_repeat Simple_repeat 1 46 0 239 347 53 42 chr5 64987027 64987217 -138098315 + L2 LINE L2 2564 2755 -559 330 26 0 0 chr5 64988459 64988498 -138097034 + (TG)n Simple_repeat Simple_repeat 2 40 0 202 360 6 32 chr5 64989336 64989511 -138096021 + L2 LINE L2 2550 2786 -528 266 268 74 0 chr5 64990503 64990597 -138094935 - MIR3 SINE MIR -29 179 78 2960 15 0 0 chr5 64991778 64992117 -138093415 + L1PA2 LINE L1 5817 6155 0 262 132 0 0 chr5 64992912 64992950 -138092582 + MER116 DNA Mariner 43 80 0 207 313 0 0 chr5 64993115 64993145 -138092387 + A-rich Low_complexity Low_complexity 1 30 -50 866 198 25 0 chr5 64993145 64993307 -138092225 + FRAM SINE Alu 1 166 0 207 313 0 0 chr5 64993307 64993356 -138092176 + A-rich Low_complexity Low_complexity 29 80 0 623 244 117 38 chr5 64993879 64994092 -138091440 - MIR SINE MIR -2 260 31 1905 168 0 0 chr5 64994259 64994551 -138090981 + AluJb SINE Alu 1 292 -20 486 321 59 12 chr5 64995621 64995845 -138089687 + MIR SINE MIR 34 262 0 385 239 71 18 chr5 64995921 64996034 -138089498 - 7SK RNA RNA -68 125 7 1375 178 58 44 chr5 64996913 64997188 -138088344 + AluJb SINE Alu 1 279 -33 417 39 0 0 chr5 64997188 64997239 -138088293 + (CA)n Simple_repeat Simple_repeat 1 51 0 1050 192 66 84 chr5 64997497 64997878 -138087654 + MLT1A2 LTR MaLR 1 374 0 2138 192 101 25 chr5 64997986 64998512 -138087020 - L1MB1 LINE L1 -1056 5090 4525 4922 147 28 29 chr5 64998522 64999575 -138085957 + L1MB1 LINE L1 5107 6166 -2 5551 123 8 19 chr5 65000147 65001333 -138084199 + L1PA15 LINE L1 4990 6156 -9 1034 280 51 38 chr5 65001493 65002158 -138083374 + L2 LINE L2 2639 3310 -3 351 205 0 13 chr5 65002409 65002487 -138083045 - MER69 DNA AcHobo 0 2526 2450 * 437 282 35 0 chr5 65002484 65002626 -138082906 - MER69 DNA AcHobo -2379 147 1 2119 76 43 0 chr5 65002719 65002996 -138082536 - AluSp SINE Alu -24 289 1 196 50 0 75 chr5 65003059 65003099 -138082433 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 651 273 175 14 chr5 65004188 65004543 -138080989 + MLT1J2 LTR MaLR 15 426 -24 5194 138 56 46 chr5 65005045 65006216 -138079316 + L1MA4A LINE L1 5107 6292 -11 272 290 18 121 chr5 65008233 65008457 -138077075 - MIR SINE MIR -22 240 40 765 220 11 11 chr5 65008919 65009096 -138076436 - L1PA16 LINE L1 -7 6159 5983 408 331 44 7 chr5 65009144 65009280 -138076252 + MIR3 SINE MIR 12 152 -56 309 323 62 25 chr5 65009283 65009444 -138076088 - MER5B DNA MER1_type -6 172 6 369 160 11 21 chr5 65009684 65009778 -138075754 + GA-rich Low_complexity Low_complexity 4 96 0 301 354 156 14 chr5 65010241 65010453 -138075079 - MIR SINE MIR -1 261 20 338 352 78 5 chr5 65010570 65010692 -138074840 + MIR SINE MIR 46 189 -73 351 0 0 0 chr5 65010692 65010731 -138074801 + (TG)n Simple_repeat Simple_repeat 1 39 0 338 352 78 5 chr5 65010731 65010801 -138074731 + MIR SINE MIR 189 252 -10 496 255 50 14 chr5 65010938 65011079 -138074453 + MIR SINE MIR 1 146 -116 504 267 149 23 chr5 65012637 65012858 -138072674 + MIR SINE MIR 3 251 -11 273 29 0 0 chr5 65013684 65013718 -138071814 + (CA)n Simple_repeat Simple_repeat 1 34 0 593 312 45 0 chr5 65013746 65013993 -138071539 + MIR SINE MIR 2 259 -3 227 304 25 38 chr5 65014897 65014976 -138070556 + L2 LINE L2 3232 3309 -4 675 202 0 0 chr5 65015019 65015133 -138070399 + FAM SINE Alu 1 114 -71 572 301 27 16 chr5 65015576 65015762 -138069770 - MIR SINE MIR -11 251 64 256 327 51 58 chr5 65015810 65015966 -138069566 + MER5A DNA MER1_type 35 189 0 256 163 23 0 chr5 65016216 65016259 -138069273 + MIR3 SINE MIR 116 159 -49 25 0 0 0 chr5 65016281 65016306 -138069226 + AT_rich Low_complexity Low_complexity 1 25 0 2433 76 0 0 chr5 65016358 65016660 -138068872 - AluSq SINE Alu -2 311 10 547 302 39 39 chr5 65016695 65017057 -138068475 + L1ME4a LINE L1 5554 5918 -203 1464 157 120 4 chr5 65017057 65017324 -138068208 + AluSg1 SINE Alu 1 298 -11 547 302 39 39 chr5 65017324 65017372 -138068160 + L1ME4a LINE L1 5917 5964 -157 319 322 0 0 chr5 65017481 65017571 -138067961 - L1MC4 LINE L1 -1339 6703 6614 301 293 0 0 chr5 65017527 65017609 -138067923 + L1MC4 LINE L1 6614 6695 -1347 * 216 0 0 0 chr5 65017609 65017633 -138067899 + (TG)n Simple_repeat Simple_repeat 2 25 0 204 250 0 0 chr5 65017672 65017720 -138067812 + (TA)n Simple_repeat Simple_repeat 2 49 0 * 237 271 17 0 chr5 65017691 65017750 -138067782 + (TG)n Simple_repeat Simple_repeat 1 60 0 26 0 0 0 chr5 65017829 65017855 -138067677 + AT_rich Low_complexity Low_complexity 1 26 0 273 200 0 0 chr5 65017871 65017931 -138067601 + L1ME4a LINE L1 6059 6118 -3 433 313 73 0 chr5 65018588 65018767 -138066765 + MIR SINE MIR 45 236 -26 199 93 47 0 chr5 65018904 65018947 -138066585 + (TA)n Simple_repeat Simple_repeat 1 45 0 252 0 0 0 chr5 65020952 65020980 -138064552 + (A)n Simple_repeat Simple_repeat 1 28 0 251 250 33 33 chr5 65020982 65021102 -138064430 - Charlie7 DNA MER1_type -53 2559 2440 946 278 122 29 chr5 65022008 65022743 -138062789 + L1ME4a LINE L1 5265 6068 -53 216 97 0 0 chr5 65022755 65022786 -138062746 + (TG)n Simple_repeat Simple_repeat 2 32 0 1095 195 80 23 chr5 65022789 65023051 -138062481 - AluJo SINE Alu -35 277 1 1461 178 45 51 chr5 65023118 65023432 -138062100 + AluJb SINE Alu 1 312 0 6309 92 9 0 chr5 65023572 65025098 -138060434 + L1PA14 LINE L1 4621 6159 -2 186 315 148 9 chr5 65025223 65025331 -138060201 + MIR SINE MIR 1 123 -139 1788 163 7 17 chr5 65025437 65025732 -138059800 - AluJb SINE Alu -16 296 5 209 192 0 58 chr5 65026772 65026824 -138058708 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 221 163 23 0 chr5 65027516 65027559 -138057973 + CT-rich Low_complexity Low_complexity 2 45 0 2679 163 12 56 chr5 65027918 65028521 -138057011 + L1MB8 LINE L1 5592 6167 -11 250 248 67 38 chr5 65028558 65028663 -138056869 + L1MC4a LINE L1 5861 5968 -1840 476 290 127 5 chr5 65028775 65028996 -138056536 - L1MC4a LINE L1 -1948 5860 5613 333 220 22 22 chr5 65029728 65029819 -138055713 + L1MB8 LINE L1 6082 6172 -6 246 232 0 107 chr5 65029852 65029964 -138055568 + L1MC4a LINE L1 5862 5961 -1847 225 146 0 0 chr5 65031170 65031218 -138054314 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 36 0 0 chr5 65031448 65031476 -138054056 + AT_rich Low_complexity Low_complexity 1 28 0 234 79 26 53 chr5 65031566 65031642 -138053890 + (TA)n Simple_repeat Simple_repeat 2 75 0 21 71 0 0 chr5 65031686 65031728 -138053804 + AT_rich Low_complexity Low_complexity 1 42 0 329 252 19 47 chr5 65032073 65032180 -138053352 - MIR SINE MIR 0 262 159 41 0 0 0 chr5 65034665 65034706 -138050826 + AT_rich Low_complexity Low_complexity 1 41 0 257 392 78 0 chr5 65035059 65035161 -138050371 + L2 LINE L2 3148 3257 -15 199 342 35 77 chr5 65036107 65036367 -138049165 - L2 LINE L2 -5 3267 3019 777 224 70 56 chr5 65036544 65036830 -138048702 + L1ME3A LINE L1 5811 6100 -70 373 204 152 23 chr5 65037076 65037208 -138048324 - MER117 DNA MER1_type -31 166 18 202 280 13 13 chr5 65038475 65038550 -138046982 - MIR SINE MIR -4 258 184 433 287 92 12 chr5 65038621 65038785 -138046747 + MIR SINE MIR 73 249 -13 903 176 33 0 chr5 65039025 65039178 -138046354 + FAM SINE Alu 1 158 -17 180 0 0 0 chr5 65039180 65039200 -138046332 + (TA)n Simple_repeat Simple_repeat 2 21 0 346 327 68 25 chr5 65040486 65040648 -138044884 + L3b LINE CR1 1219 1387 -196 33 85 0 0 chr5 65042673 65042755 -138042777 + AT_rich Low_complexity Low_complexity 1 82 0 234 348 22 0 chr5 65042829 65042918 -138042614 - MIR SINE MIR -59 149 59 389 297 174 5 chr5 65043724 65043919 -138041613 + MIR SINE MIR 21 248 -14 1923 140 3 10 chr5 65043948 65044248 -138041284 - AluSx SINE Alu -14 298 1 22 80 0 0 chr5 65044708 65044758 -138040774 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 65045627 65045651 -138039881 + AT_rich Low_complexity Low_complexity 1 24 0 237 173 0 19 chr5 65046245 65046297 -138039235 - L1MC4 LINE L1 -1340 6702 6652 23 0 0 0 chr5 65046331 65046354 -138039178 + AT_rich Low_complexity Low_complexity 1 23 0 216 97 0 0 chr5 65049027 65049058 -138036474 + (A)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 65049607 65049628 -138035904 + AT_rich Low_complexity Low_complexity 1 21 0 547 189 61 61 chr5 65051476 65051672 -138033860 + MER113 DNA MER1_type? 4 199 -322 363 121 0 0 chr5 65052685 65052743 -138032789 + (TG)n Simple_repeat Simple_repeat 1 58 0 29 47 0 0 chr5 65053497 65053540 -138031992 + AT_rich Low_complexity Low_complexity 1 43 0 1314 191 11 4 chr5 65054449 65054722 -138030810 - L1MB3 LINE L1 -2 6181 5907 2406 90 0 7 chr5 65055268 65055578 -138029954 + AluSq SINE Alu 1 308 -5 742 252 114 5 chr5 65055875 65056085 -138029447 + MIR SINE MIR 17 249 -13 26 30 0 0 chr5 65056710 65056743 -138028789 + AT_rich Low_complexity Low_complexity 1 33 0 285 278 31 86 chr5 65056785 65056947 -138028585 + MIR SINE MIR 50 202 -60 563 27 0 7 chr5 65057303 65057391 -138028141 - L1P LINE L1 -735 5419 5335 6708 11 0 0 chr5 65057391 65058135 -138027397 + L1PA2 LINE L1 5404 6155 0 192 300 67 0 chr5 65058137 65058197 -138027335 + L2 LINE L2 3168 3231 -41 620 274 18 12 chr5 65059122 65059290 -138026242 - MIR SINE MIR -12 250 82 482 219 32 8 chr5 65059598 65059721 -138025811 - L1MB5 LINE L1 -151 6023 5898 449 88 168 88 chr5 65059859 65059972 -138025560 + L1MA3 LINE L1 12 133 -7432 * 14343 119 25 21 chr5 65059969 65062346 -138023186 + L1MA3 LINE L1 1099 3484 -4081 5986 168 47 8 chr5 65062334 65064628 -138020904 + L1MA3 LINE L1 5295 7724 0 * 292 337 71 0 chr5 65067174 65067272 -138018260 + MER91C DNA MER1_type 1 105 -35 506 284 169 18 chr5 65067399 65067624 -138017908 + MIR SINE MIR 2 260 -2 23 0 0 0 chr5 65068160 65068183 -138017349 + AT_rich Low_complexity Low_complexity 1 23 0 34 55 0 0 chr5 65069137 65069192 -138016340 + AT_rich Low_complexity Low_complexity 1 55 0 248 242 89 121 chr5 65069431 65069588 -138015944 - MIR SINE MIR -6 256 105 234 0 0 0 chr5 65069682 65069708 -138015824 + (CA)n Simple_repeat Simple_repeat 2 27 0 387 283 35 9 chr5 65070493 65070606 -138014926 + L2 LINE L2 3182 3297 -16 189 0 0 0 chr5 65070611 65070632 -138014900 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 259 307 102 63 chr5 65070859 65071023 -138014509 + L3 LINE CR1 1353 1528 -49 2078 146 7 0 chr5 65071023 65071324 -138014208 - AluSx SINE Alu -9 303 1 259 307 102 63 chr5 65071324 65071364 -138014168 + L3 LINE CR1 1528 1565 -12 997 281 71 19 chr5 65072076 65072442 -138013090 + LTR16C LTR ERVL 107 491 0 2323 97 0 7 chr5 65072739 65073047 -138012485 + AluSx SINE Alu 3 308 -4 2749 159 44 26 chr5 65073496 65074036 -138011496 - MER21A LTR ERV1 -6 925 376 1113 122 195 0 chr5 65074041 65074262 -138011270 - MER21A LTR ERV1 -667 264 1 868 275 27 117 chr5 65074652 65075249 -138010283 + MER50 LTR ERV1 9 551 -183 14387 210 9 13 chr5 65075293 65079439 -138006093 - L1PB1 LINE L1 -4 6863 2764 8896 34 42 0 chr5 65079439 65081243 -138004289 + L1PA3 LINE L1 4311 6150 -5 14387 210 9 13 chr5 65081243 65081545 -138003987 - L1PB1 LINE L1 -4103 2764 2462 3077 230 122 25 chr5 65081633 65082691 -138002841 - L1PB1 LINE L1 -5700 1163 3 1383 278 58 17 chr5 65082781 65083263 -138002269 + MER66-int LTR ERV1 2 503 -6702 2047 294 42 37 chr5 65083284 65084112 -138001420 + MER66-int LTR ERV1 685 1516 -5689 1853 131 96 0 chr5 65084154 65084436 -138001096 + AluSx SINE Alu 1 309 -3 579 278 23 0 chr5 65084436 65084612 -138000920 + MER66-int LTR ERV1 1633 1812 -5393 396 303 0 0 chr5 65084617 65084736 -138000796 + MER66-int LTR ERV1 1703 1821 -5270 3038 261 46 25 chr5 65085052 65086565 -137998967 + MER66-int LTR ERV1 2246 4036 -844 538 303 35 27 chr5 65087412 65087778 -137997754 + MER66-int LTR ERV1 6075 6443 -233 1426 176 15 37 chr5 65087801 65088152 -137997380 + MER61C LTR ERV1 1 431 0 895 226 20 0 chr5 65088184 65088383 -137997149 + MER50-int LTR ERV1 6994 7196 -9 1559 264 116 29 chr5 65088385 65089039 -137996493 + MER50 LTR ERV1 1 711 -23 330 260 13 0 chr5 65091196 65091273 -137994259 - MIR SINE MIR -108 154 77 315 0 0 0 chr5 65092070 65092105 -137993427 + (TG)n Simple_repeat Simple_repeat 2 36 0 203 273 0 0 chr5 65093065 65093109 -137992423 + (TG)n Simple_repeat Simple_repeat 2 45 0 187 80 0 0 chr5 65093209 65093234 -137992298 + MIR SINE MIR 210 234 -28 249 302 0 0 chr5 65093685 65093748 -137991784 + CT-rich Low_complexity Low_complexity 4 66 0 201 343 45 0 chr5 65094953 65095020 -137990512 + MIR SINE MIR 54 123 -85 807 369 64 21 chr5 65096383 65097061 -137988471 + L2 LINE L2 2357 3059 -213 873 265 104 49 chr5 65097176 65097667 -137987865 + MLT1L LTR MaLR 1 518 -97 3444 27 0 0 chr5 65098786 65099188 -137986344 + L1PA4 LINE L1 5752 6153 -2 547 215 13 35 chr5 65099335 65099554 -137985978 + MER33 DNA MER1_type 13 324 0 352 326 0 43 chr5 65099662 65099800 -137985732 + MIR3 SINE MIR 76 207 -1 194 236 18 36 chr5 65099849 65099904 -137985628 - L2 LINE L2 -5 3267 3214 342 0 0 0 chr5 65100042 65100080 -137985452 + (CA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 65100106 65100127 -137985405 + AT_rich Low_complexity Low_complexity 1 21 0 424 321 29 16 chr5 65100672 65100850 -137984682 + MIR SINE MIR 19 197 -62 829 275 10 0 chr5 65101067 65101274 -137984258 + MIR SINE MIR 13 221 -41 398 261 108 8 chr5 65102581 65102711 -137982821 + L2 LINE L2 3171 3313 0 2030 181 11 11 chr5 65104108 65104484 -137981048 - MLT1B LTR MaLR -12 378 3 230 266 82 101 chr5 65105611 65105818 -137979714 + MLT1J LTR MaLR 112 314 -197 24 53 0 0 chr5 65106798 65106836 -137978696 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 65107029 65107057 -137978475 + AT_rich Low_complexity Low_complexity 1 28 0 2257 117 3 0 chr5 65107157 65107465 -137978067 - AluSx SINE Alu -1 311 3 25 51 0 0 chr5 65107687 65107726 -137977806 + AT_rich Low_complexity Low_complexity 1 39 0 568 329 32 70 chr5 65107818 65108162 -137977370 + L2 LINE L2 2937 3267 -5 348 299 51 56 chr5 65109415 65109649 -137975883 + MIR SINE MIR 19 251 -11 814 68 17 8 chr5 65110247 65110364 -137975168 - AluY SINE Alu -16 295 178 605 227 163 6 chr5 65110407 65110579 -137974953 - MIR SINE MIR -3 259 61 327 219 106 20 chr5 65112368 65112519 -137973013 + MER103 DNA DNA 2 165 -1 189 0 0 0 chr5 65112838 65112859 -137972673 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 984 148 68 132 chr5 65113180 65113304 -137972228 - MER33 DNA MER1_type -2261 324 194 3561 92 34 11 chr5 65113304 65113857 -137971675 - L1MA3 LINE L1 -1 6304 5739 984 148 68 132 chr5 65113857 65114087 -137971445 - MER33 DNA MER1_type -2391 194 1 267 273 34 0 chr5 65114515 65114603 -137970929 + (TA)n Simple_repeat Simple_repeat 1 91 0 514 270 135 11 chr5 65114799 65114984 -137970548 - MIR SINE MIR -19 243 36 935 126 69 0 chr5 65115720 65115879 -137969653 - L1MA8 LINE L1 -7 6284 6115 1244 141 124 21 chr5 65115880 65116122 -137969410 - L1PA13 LINE L1 0 6163 5897 * 1270 121 6 16 chr5 65116118 65116339 -137969193 - L1MA8 LINE L1 -166 6008 5893 226 382 46 7 chr5 65116669 65116821 -137968711 - MIR3 SINE MIR -25 183 26 1610 191 17 0 chr5 65117315 65117603 -137967929 - AluJb SINE Alu -15 297 5 1581 227 89 50 chr5 65118625 65119185 -137966347 + L1ME3A LINE L1 5499 6080 -90 317 277 10 50 chr5 65120906 65121007 -137964525 + L2 LINE L2 3152 3248 -65 1378 205 37 39 chr5 65121007 65121388 -137964144 - MER63B DNA MER1_type -45 391 12 1370 193 55 11 chr5 65121719 65121994 -137963538 + AluJo SINE Alu 1 287 -25 294 326 106 8 chr5 65123265 65123397 -137962135 + MIR3 SINE MIR 44 188 -20 422 267 17 8 chr5 65123476 65123596 -137961936 - L2 LINE L2 -1 3312 3192 688 201 225 29 chr5 65123601 65123810 -137961722 - MIR SINE MIR 0 262 13 504 274 118 10 chr5 65124015 65124219 -137961313 - MIR SINE MIR -34 228 3 534 292 20 33 chr5 65124859 65125084 -137960448 + MIR SINE MIR 20 246 -16 301 339 6 30 chr5 65126373 65126538 -137958994 + MARNA DNA Mariner 14 174 -412 291 190 30 50 chr5 65126574 65126674 -137958858 + CT-rich Low_complexity Low_complexity 5 102 0 219 240 20 0 chr5 65127382 65127432 -137958100 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 54 0 0 chr5 65128520 65128557 -137956975 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 65132276 65132307 -137953225 + AT_rich Low_complexity Low_complexity 1 31 0 409 338 63 30 chr5 65134472 65134709 -137950823 + L2 LINE L2 3027 3271 -1 254 310 0 50 chr5 65134906 65135006 -137950526 + MIR SINE MIR 42 136 -72 407 331 11 39 chr5 65136193 65136371 -137949161 - MIR SINE MIR -78 184 12 478 243 159 5 chr5 65136476 65136660 -137948872 - MIR SINE MIR -33 229 22 482 167 9 0 chr5 65137705 65137813 -137947719 + CT-rich Low_complexity Low_complexity 2 110 0 24 32 0 0 chr5 65138009 65138040 -137947492 + AT_rich Low_complexity Low_complexity 1 31 0 1695 167 3 26 chr5 65138099 65138404 -137947128 + AluJb SINE Alu 15 312 0 343 228 114 8 chr5 65140237 65140360 -137945172 + L1ME4a LINE L1 5984 6119 -2 270 330 20 0 chr5 65142203 65142303 -137943229 + L2 LINE L2 2224 2325 -989 610 261 78 54 chr5 65142303 65142598 -137942934 - LTR16C LTR ERVL -1 490 189 1949 288 77 16 chr5 65142763 65143698 -137941834 + L2 LINE L2 2322 3313 0 1307 107 112 0 chr5 65143852 65144058 -137941474 - MER30 DNA MER1_type -1 229 1 203 197 148 0 chr5 65144854 65144915 -137940617 + L2 LINE L2 3240 3309 -4 21425 179 23 10 chr5 65145458 65150044 -137935488 + L1PA8 LINE L1 1010 5827 -996 2339 87 0 3 chr5 65150044 65150342 -137935190 + AluY SINE Alu 1 297 -14 21425 179 23 10 chr5 65150342 65151351 -137934181 + L1PA8 LINE L1 5827 6821 -2 317 91 0 18 chr5 65151864 65151919 -137933613 + (TG)n Simple_repeat Simple_repeat 2 55 0 585 290 113 25 chr5 65152260 65152739 -137932793 - L1ME4a LINE L1 -2 6119 5599 1128 173 5 0 chr5 65152744 65152952 -137932580 - L1PA16 LINE L1 -11 6155 5947 189 262 0 0 chr5 65153297 65153358 -137932174 + A-rich Low_complexity Low_complexity 1 61 0 999 185 31 40 chr5 65153740 65153962 -137931570 + MER58A DNA MER1_type 2 221 -3 30 0 0 0 chr5 65154342 65154372 -137931160 + AT_rich Low_complexity Low_complexity 1 30 0 363 344 89 13 chr5 65155649 65155806 -137929726 + MIR SINE MIR 20 188 -74 648 318 127 36 chr5 65156140 65156606 -137928926 + L2 LINE L2 2806 3313 0 259 240 30 10 chr5 65156628 65156728 -137928804 + (TA)n Simple_repeat Simple_repeat 2 103 0 27 0 0 0 chr5 65156744 65156771 -137928761 + AT_rich Low_complexity Low_complexity 1 27 0 1759 162 0 55 chr5 65156786 65157114 -137928418 - AluJb SINE Alu -2 310 1 612 268 174 43 chr5 65157183 65157482 -137928050 + MLT1I LTR MaLR 32 369 -40 1038 243 176 49 chr5 65157615 65158376 -137927156 - HAL1 LINE L1 -129 2378 1521 544 200 39 15 chr5 65159440 65159570 -137925962 + FLAM_C SINE Alu 1 133 0 258 32 0 0 chr5 65159594 65159625 -137925907 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 2654 139 9 11 chr5 65160574 65161034 -137924498 - L1MA8 LINE L1 -10 6281 5823 3063 136 60 4 chr5 65161034 65161535 -137923997 + L1MA8 LINE L1 5263 5797 -494 237 33 0 0 chr5 65161535 65161565 -137923967 + (CA)n Simple_repeat Simple_repeat 2 31 0 3063 136 60 4 chr5 65161565 65161601 -137923931 + L1MA8 LINE L1 5797 5830 -461 21 0 0 0 chr5 65161677 65161698 -137923834 + AT_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr5 65162269 65162311 -137923221 + AT_rich Low_complexity Low_complexity 1 42 0 1816 133 1 3 chr5 65162358 65162616 -137922916 + L1ME LINE L1 5495 5750 -420 2839 107 30 0 chr5 65162616 65163048 -137922484 + L1MA4 LINE L1 5850 6294 -6 1816 133 1 3 chr5 65163048 65163078 -137922454 + L1ME LINE L1 5750 5779 -391 407 303 165 57 chr5 65164424 65165017 -137920515 + L2 LINE L2 2625 3287 -26 2982 80 31 58 chr5 65165017 65165465 -137920067 + MLT2A1 LTR ERVL 1 436 -8 486 253 74 25 chr5 65165497 65165699 -137919833 + MER102a DNA MER1_type 115 326 -4 199 313 0 0 chr5 65167565 65167629 -137917903 - MIR SINE MIR -26 236 173 42434 36 22 2 chr5 65167629 65173653 -137911879 + L1PA3 LINE L1 4 6153 -2 197 266 31 16 chr5 65173663 65173727 -137911805 - MIR SINE MIR -77 185 121 972 106 67 31 chr5 65173841 65174070 -137911462 + Tigger4(Zombi) DNA MER2_type 1 2610 -121 1308 194 72 0 chr5 65174071 65174334 -137911198 + AluJo SINE Alu 1 282 -30 396 0 0 0 chr5 65174352 65174396 -137911136 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 226 264 0 66 chr5 65175266 65175357 -137910175 + 7SK RNA RNA 7 91 -102 631 231 96 28 chr5 65175714 65175996 -137909536 - HAL1 LINE L1 -229 2278 1978 10524 142 42 13 chr5 65176014 65176051 -137909481 - L1MA3 LINE L1 0 6305 6271 360 64 0 0 chr5 65176051 65176098 -137909434 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 10524 142 42 13 chr5 65176098 65177285 -137908247 - L1MA3 LINE L1 -34 6271 5120 1993 138 0 23 chr5 65177285 65177590 -137907942 + AluSx SINE Alu 1 298 -14 10524 142 42 13 chr5 65177590 65179293 -137906239 - L1MA3 LINE L1 -1185 5120 3289 2135 107 4 0 chr5 65179323 65179595 -137905937 - AluSg SINE Alu -36 274 2 502 297 55 41 chr5 65179633 65179976 -137905556 - HAL1 LINE L1 -1417 1090 743 1856 184 104 13 chr5 65179986 65180360 -137905172 + MSTB LTR MaLR 19 426 0 8792 171 18 19 chr5 65180360 65181773 -137903759 + MSTB-int LTR MaLR 1 1413 -238 2135 126 3 7 chr5 65181773 65182074 -137903458 + AluSx SINE Alu 1 300 -12 8792 171 18 19 chr5 65182074 65182313 -137903219 + MSTB-int LTR MaLR 1413 1651 0 1935 177 100 8 chr5 65182313 65182703 -137902829 + MSTB LTR MaLR 1 426 0 225 156 67 89 chr5 65182727 65182817 -137902715 - HAL1 LINE L1 -1769 738 651 3234 119 87 35 chr5 65182837 65183153 -137902379 - L1MA3 LINE L1 -1 6304 6006 1892 156 23 0 chr5 65183153 65183454 -137902078 - AluSx SINE Alu -3 309 2 3234 119 87 35 chr5 65183454 65183735 -137901797 - L1MA3 LINE L1 -299 6006 5676 299 316 146 44 chr5 65183759 65184053 -137901479 - HAL1 LINE L1 -1852 655 332 1921 168 28 41 chr5 65184314 65184707 -137900825 - MLT1B LTR MaLR 0 390 3 2626 48 0 3 chr5 65186084 65186394 -137899138 + AluY SINE Alu 1 309 -2 257 280 47 67 chr5 65186642 65186792 -137898740 + MIR SINE MIR 66 212 -50 198 236 0 0 chr5 65186807 65186862 -137898670 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 187 346 125 0 chr5 65187090 65187226 -137898306 - MIR SINE MIR -75 187 35 202 360 62 31 chr5 65187292 65187517 -137898015 - L2 LINE L2 -231 3041 2810 238 299 134 45 chr5 65187934 65188158 -137897374 - L2 LINE L2 -649 2665 2422 283 221 10 135 chr5 65188222 65188326 -137897206 - MIR SINE MIR -127 135 45 545 238 0 0 chr5 65188327 65188449 -137897083 + MER3 DNA MER1_type 41 162 -47 1305 185 40 23 chr5 65188473 65188824 -137896708 + MER3 DNA MER1_type 2268 2624 0 275 247 43 0 chr5 65189807 65189900 -137895632 + (TA)n Simple_repeat Simple_repeat 2 98 0 306 375 67 43 chr5 65190941 65191448 -137894084 + L2 LINE L2 2572 3091 -181 188 207 121 35 chr5 65191489 65191547 -137893985 - MER5B DNA MER1_type -22 156 94 * 210 257 10 119 chr5 65191525 65191557 -137893975 + MIR SINE MIR 48 82 -126 1842 144 16 33 chr5 65191557 65191862 -137893670 - AluSx SINE Alu -12 300 1 210 257 10 119 chr5 65191862 65191930 -137893602 + MIR SINE MIR 82 137 -71 182 88 0 29 chr5 65192307 65192341 -137893191 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 198 230 103 46 chr5 65192368 65192455 -137893077 + L2 LINE L2 3160 3251 -62 201 121 0 0 chr5 65193595 65193628 -137891904 + (A)n Simple_repeat Simple_repeat 1 33 0 262 325 226 20 chr5 65194311 65194652 -137890880 - L2 LINE L2 -674 2640 2230 228 372 53 106 chr5 65194781 65195063 -137890469 - L2 LINE L2 -8 3264 2998 181 326 130 22 chr5 65196119 65196211 -137889321 + L2 LINE L2 2998 3099 -173 206 294 191 26 chr5 65196679 65197057 -137888475 - L2 LINE L2 -479 2835 2396 2075 121 26 37 chr5 65197307 65197686 -137887846 - THE1C LTR MaLR 0 375 1 829 233 41 50 chr5 65198237 65198456 -137887076 - MER20 DNA MER1_type -1 218 2 1907 179 7 54 chr5 65198786 65199195 -137886337 + MLT1B LTR MaLR 1 390 0 459 0 0 0 chr5 65199907 65199958 -137885574 + (CA)n Simple_repeat Simple_repeat 2 52 0 414 0 0 0 chr5 65200201 65200247 -137885285 + (CA)n Simple_repeat Simple_repeat 2 47 0 334 339 65 8 chr5 65200285 65200409 -137885123 - L2 LINE L2 0 3272 3142 1449 181 66 10 chr5 65200460 65200748 -137884784 + AluJo SINE Alu 1 304 -8 24 0 0 0 chr5 65201731 65201755 -137883777 + AT_rich Low_complexity Low_complexity 1 24 0 2536 82 11 11 chr5 65204533 65204900 -137880632 - L1PA14 LINE L1 -1 6160 5794 359 285 168 0 chr5 65205211 65205419 -137880113 - L1MC4a LINE L1 -302 5819 5601 271 290 68 106 chr5 65207360 65207729 -137877803 + L2 LINE L2 2107 2461 -853 657 292 81 5 chr5 65207769 65208009 -137877523 - MIR SINE MIR -1 261 4 252 366 109 34 chr5 65208264 65208614 -137876918 + L2 LINE L2 2854 3229 -43 301 305 104 13 chr5 65209141 65209295 -137876237 + L1ME LINE L1 5668 5835 -286 330 167 0 0 chr5 65209297 65209351 -137876181 + L1MC/D LINE L1 5636 5689 -655 321 262 28 9 chr5 65209711 65209818 -137875714 - MER110 LTR ERV1 -6 485 377 485 227 34 0 chr5 65209828 65209947 -137875585 - MER110 LTR ERV1 -367 124 2 1856 108 63 66 chr5 65210722 65211138 -137874394 - THE1C LTR MaLR -1 374 1 2159 125 7 3 chr5 65211985 65212289 -137873243 + AluSx SINE Alu 1 305 -7 214 283 33 22 chr5 65212306 65212398 -137873134 + MIR SINE MIR 37 129 -79 548 263 88 51 chr5 65212414 65212742 -137872790 - L2 LINE L2 0 3313 114 276 232 0 43 chr5 65213333 65213402 -137872130 - MIR SINE MIR 0 262 197 2087 131 3 0 chr5 65213405 65213696 -137871836 + AluSp SINE Alu 3 294 -19 193 299 15 30 chr5 65213706 65213773 -137871759 - L3 LINE CR1 -9 1568 1503 750 313 88 30 chr5 65213909 65214009 -137871523 - L3 LINE CR1 -180 1397 1304 1609 186 3 10 chr5 65214009 65214305 -137871227 - AluJb SINE Alu -18 294 1 750 313 88 30 chr5 65214305 65214604 -137870928 - L3 LINE CR1 -273 1304 975 309 365 63 11 chr5 65214788 65214977 -137870555 - L3 LINE CR1 -981 596 398 277 319 70 64 chr5 65215363 65215692 -137869840 + L3b LINE CR1 1114 1444 -139 2317 53 7 0 chr5 65217438 65217742 -137867790 + AluY SINE Alu 1 306 0 294 337 40 0 chr5 65217773 65217874 -137867658 + MER102b DNA MER1_type 223 327 -14 189 0 0 0 chr5 65218650 65218671 -137866861 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 205 239 30 0 chr5 65219037 65219104 -137866428 + (TA)n Simple_repeat Simple_repeat 2 70 0 919 258 24 42 chr5 65219404 65219741 -137865791 + MARNA DNA Mariner 204 534 -52 215 373 98 20 chr5 65220349 65220502 -137865030 - L2 LINE L2 0 3272 3108 515 319 100 34 chr5 65220695 65221015 -137864517 + MLT1I LTR MaLR 46 386 -23 1504 171 32 8 chr5 65221647 65221899 -137863633 - AluJo SINE Alu -53 259 2 1322 322 170 23 chr5 65223539 65224823 -137860709 + L2 LINE L2 1282 2753 -561 1143 82 104 16 chr5 65224952 65225135 -137860397 - MER30 DNA MER1_type -31 199 1 652 284 92 33 chr5 65225272 65225729 -137859803 - LTR33A LTR ERVL -2 521 1 182 250 0 42 chr5 65225781 65225829 -137859703 + L2 LINE L2 3182 3227 -86 13900 141 42 9 chr5 65225867 65227196 -137858336 + Tigger1 DNA MER2_type 1 1285 -1133 2225 128 31 22 chr5 65227196 65227555 -137857977 + THE1B LTR MaLR 1 362 -2 11927 88 4 1 chr5 65227557 65229131 -137856401 + THE1B-int LTR MaLR 1 1580 0 2231 128 33 19 chr5 65229131 65229490 -137856042 + THE1B LTR MaLR 1 364 0 13900 141 42 9 chr5 65229490 65230487 -137855045 + Tigger1 DNA MER2_type 1284 2408 -10 2094 116 0 17 chr5 65230589 65230891 -137854641 + AluSq SINE Alu 17 313 0 339 263 12 0 chr5 65231212 65231292 -137854240 + L2 LINE L2 3229 3309 -4 369 251 23 11 chr5 65232413 65232521 -137853011 + MER5B DNA MER1_type 74 167 -11 186 250 39 0 chr5 65232819 65232871 -137852661 - L3 LINE CR1 -297 1280 1227 228 268 61 24 chr5 65232901 65232983 -137852549 + L3 LINE CR1 1317 1401 -176 21 71 0 0 chr5 65233222 65233264 -137852268 + AT_rich Low_complexity Low_complexity 1 42 0 8449 48 0 0 chr5 65236750 65237719 -137847813 + LTR5 LTR ERVK 1 969 0 297 309 58 53 chr5 65238011 65238218 -137847314 + L2 LINE L2 2747 2954 -360 222 128 0 0 chr5 65238260 65238299 -137847233 + (CCA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 65238480 65238508 -137847024 + AT_rich Low_complexity Low_complexity 1 28 0 358 288 106 6 chr5 65238738 65238908 -137846624 - MIR SINE MIR -12 250 64 185 268 146 81 chr5 65239638 65239761 -137845771 - L2 LINE L2 -5 3267 3137 236 174 43 0 chr5 65239814 65239860 -137845672 + MLT1B LTR MaLR 1 48 -342 1893 157 70 0 chr5 65239870 65240215 -137845317 + MLT1B LTR MaLR 22 390 0 2198 98 0 3 chr5 65242010 65242325 -137843207 + AluY SINE Alu 1 314 0 227 322 96 41 chr5 65242900 65243046 -137842486 + MER5B DNA MER1_type 3 156 -22 27 0 0 0 chr5 65243647 65243674 -137841858 + AT_rich Low_complexity Low_complexity 1 27 0 1755 164 0 35 chr5 65243916 65244226 -137841306 + AluJo SINE Alu 1 299 -13 25 0 0 0 chr5 65244871 65244896 -137840636 + AT_rich Low_complexity Low_complexity 1 25 0 201 74 0 0 chr5 65246048 65246075 -137839457 + (A)n Simple_repeat Simple_repeat 1 27 0 887 284 79 27 chr5 65247360 65247726 -137837806 + MLT1I LTR MaLR 19 403 -6 26 30 0 0 chr5 65247729 65247762 -137837770 + AT_rich Low_complexity Low_complexity 1 33 0 532 241 57 8 chr5 65249219 65249377 -137836155 + L1ME3A LINE L1 5989 6159 -9 21 57 0 0 chr5 65250205 65250240 -137835292 + AT_rich Low_complexity Low_complexity 1 35 0 498 0 15 0 chr5 65250265 65250331 -137835201 + L1HS LINE L1 6089 6155 0 4416 133 16 3 chr5 65250487 65251179 -137834353 + L1PA16 LINE L1 5466 6166 0 492 304 13 19 chr5 65252101 65252259 -137833273 - MER5B DNA MER1_type -14 164 8 508 252 53 71 chr5 65252498 65252724 -137832808 - MER112 DNA MER1_type -13 247 26 23 54 0 0 chr5 65253046 65253083 -137832449 + AT_rich Low_complexity Low_complexity 1 37 0 214 146 171 0 chr5 65253708 65253749 -137831783 - L2 LINE L2 -1 3312 3265 324 295 98 0 chr5 65254355 65254467 -137831065 + MIR3 SINE MIR 37 159 -49 21 0 0 0 chr5 65255005 65255026 -137830506 + AT_rich Low_complexity Low_complexity 1 21 0 1666 225 92 33 chr5 65255808 65256297 -137829235 + MLT2B1 LTR ERVL 1 518 -2 292 304 111 47 chr5 65257688 65257859 -137827673 + MIR3 SINE MIR 19 200 -8 29 0 0 0 chr5 65258545 65258574 -137826958 + AT_rich Low_complexity Low_complexity 1 29 0 715 296 58 12 chr5 65259450 65259690 -137825842 - MIR SINE MIR 0 262 12 219 226 203 0 chr5 65260383 65260486 -137825046 + MIR SINE MIR 22 144 -64 198 0 0 0 chr5 65261131 65261153 -137824379 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr5 65261936 65261961 -137823571 + AT_rich Low_complexity Low_complexity 1 25 0 2099 93 69 0 chr5 65261969 65262258 -137823274 + AluSc SINE Alu 1 309 0 28 0 0 0 chr5 65263214 65263242 -137822290 + AT_rich Low_complexity Low_complexity 1 28 0 181 250 100 17 chr5 65263388 65263448 -137822084 - MIR SINE MIR -86 176 112 284 248 78 54 chr5 65263869 65263998 -137821534 + MIR SINE MIR 3 134 -128 276 343 0 50 chr5 65265009 65265108 -137820424 + LTR16A LTR ERVL 357 450 0 2059 108 79 26 chr5 65265666 65266008 -137819524 + THE1B LTR MaLR 3 362 -2 198 0 0 0 chr5 65267415 65267437 -137818095 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 322 278 34 51 chr5 65268444 65268620 -137816912 + L1M2 LINE L1 4 176 -6673 * 393 177 83 10 chr5 65268594 65268690 -137816842 + L1PA15-16 LINE L1 608 710 -6139 4074 141 49 29 chr5 65268692 65269445 -137816087 - LTR1 LTR ERV1 -1 784 17 5649 252 45 68 chr5 65269976 65272993 -137812539 + L1PA15-16 LINE L1 1427 4452 -2397 4340 141 11 9 chr5 65272994 65273739 -137811793 + L1PA16 LINE L1 5421 6166 0 185 296 89 93 chr5 65274351 65274598 -137810934 - L2 LINE L2 -90 3182 2937 247 302 48 87 chr5 65275008 65275134 -137810398 + L2 LINE L2 3140 3260 -12 432 0 0 0 chr5 65275628 65275676 -137809856 + (TG)n Simple_repeat Simple_repeat 2 49 0 1548 212 7 71 chr5 65277521 65277862 -137807670 + LTR52 LTR ERVL 1 313 -108 516 93 0 0 chr5 65277862 65277937 -137807595 + (TG)n Simple_repeat Simple_repeat 1 75 0 1548 212 7 71 chr5 65277937 65278006 -137807526 + LTR52 LTR ERVL 313 385 -36 232 231 0 0 chr5 65278532 65278571 -137806961 - L2 LINE L2 -24 3248 3210 * 261 111 0 0 chr5 65278541 65278577 -137806955 - MIR SINE MIR -27 235 200 311 154 77 0 chr5 65279191 65279256 -137806276 - L1MC1 LINE L1 -9 6324 6255 23 0 0 0 chr5 65279500 65279523 -137806009 + AT_rich Low_complexity Low_complexity 1 23 0 1407 264 94 49 chr5 65279605 65280014 -137805518 + L1ME3A LINE L1 5337 5726 -444 1878 149 3 0 chr5 65280014 65280327 -137805205 + AluSq SINE Alu 1 314 0 1407 264 94 49 chr5 65280327 65280412 -137805120 + L1ME3A LINE L1 5726 5806 -364 1572 142 0 12 chr5 65280412 65280658 -137804874 + AluJo SINE Alu 69 311 -1 1407 264 94 49 chr5 65280658 65280951 -137804581 + L1ME3A LINE L1 5806 6161 -9 869 282 73 33 chr5 65281424 65282151 -137803381 + L1MEd LINE L1 612 1390 -4865 373 350 28 39 chr5 65282182 65282436 -137803096 + L1MEd LINE L1 1456 1706 -4604 225 140 7 120 chr5 65282781 65282931 -137802601 + (TTATA)n Simple_repeat Simple_repeat 1 133 0 249 234 166 28 chr5 65282971 65283369 -137802163 + L1MEd LINE L1 2729 3181 -2948 186 118 0 0 chr5 65283509 65283543 -137801989 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 303 356 35 0 chr5 65286422 65286537 -137798995 - MIR3 SINE MIR -5 203 85 2568 56 0 0 chr5 65287067 65287369 -137798163 - AluY SINE Alu -9 302 1 24 0 0 0 chr5 65287474 65287498 -137798034 + AT_rich Low_complexity Low_complexity 1 24 0 588 250 62 0 chr5 65287658 65287802 -137797730 + MIR SINE MIR 66 218 -44 250 292 149 6 chr5 65288072 65288247 -137797285 + L1MEd LINE L1 3913 4112 -2017 317 222 49 12 chr5 65288260 65288341 -137797191 + MER5A DNA MER1_type 26 109 -80 271 318 38 13 chr5 65288432 65288668 -137796864 + L1MEd LINE L1 4143 4384 -1745 260 317 20 25 chr5 65288806 65289008 -137796524 + L1MEd LINE L1 4834 5034 -1095 24 0 0 0 chr5 65289743 65289767 -137795765 + AT_rich Low_complexity Low_complexity 1 24 0 243 189 0 0 chr5 65289887 65289940 -137795592 + (CA)n Simple_repeat Simple_repeat 2 54 0 748 297 17 8 chr5 65290491 65290730 -137794802 + MIR SINE MIR 12 252 -10 22 70 0 0 chr5 65290915 65290958 -137794574 + AT_rich Low_complexity Low_complexity 1 43 0 300 27 0 0 chr5 65291150 65291187 -137794345 + (TG)n Simple_repeat Simple_repeat 2 38 0 856 229 96 29 chr5 65291698 65292012 -137793520 + MER113 DNA MER1_type? 38 372 -149 316 204 0 31 chr5 65292013 65292111 -137793421 + CT-rich Low_complexity Low_complexity 1 95 0 1440 256 75 41 chr5 65292112 65292841 -137792691 - L2 LINE L2 -6 3307 2543 1900 150 10 7 chr5 65292944 65293250 -137792282 + AluSx SINE Alu 1 307 -5 290 272 0 33 chr5 65293816 65293908 -137791624 - L1MC4 LINE L1 -1340 6702 6614 216 343 9 9 chr5 65294427 65294532 -137791000 + L2 LINE L2 2579 2683 -631 248 271 68 0 chr5 65294796 65294855 -137790677 + L2 LINE L2 3241 3303 -10 2147 167 5 13 chr5 65296653 65297031 -137788501 + THE1C LTR MaLR 1 375 0 9398 114 50 43 chr5 65297031 65298599 -137786933 + THE1C-int LTR MaLR 1 1580 0 2111 150 21 19 chr5 65298599 65298973 -137786559 + THE1C LTR MaLR 1 375 0 1848 159 0 7 chr5 65299594 65299890 -137785642 - AluJb SINE Alu -18 294 1 247 234 47 0 chr5 65299917 65299981 -137785551 - L1ME LINE L1 -388 5776 5710 461 318 110 57 chr5 65301265 65301702 -137783830 + L3 LINE CR1 700 1159 -418 188 313 30 61 chr5 65302289 65302420 -137783112 + L3 LINE CR1 1277 1403 -174 457 213 195 0 chr5 65302925 65303075 -137782457 - MER5A DNA MER1_type -2 187 4 1652 142 92 3 chr5 65303318 65303634 -137781898 + MER2 DNA MER2_type 1 344 0 285 259 259 14 chr5 65304186 65304398 -137781134 + L2 LINE L2 2921 3184 -129 1867 210 60 29 chr5 65304408 65304888 -137780644 - MLT1D LTR MaLR -5 500 6 525 258 0 45 chr5 65304890 65305022 -137780510 + L2 LINE L2 3187 3312 -1 2023 133 7 10 chr5 65305100 65305402 -137780130 - AluSx SINE Alu -11 301 1 220 340 57 0 chr5 65305408 65305514 -137780018 + MIR SINE MIR 75 186 -76 22 0 0 0 chr5 65306244 65306266 -137779266 + AT_rich Low_complexity Low_complexity 1 22 0 785 267 0 0 chr5 65306606 65306771 -137778761 + MER5A DNA MER1_type 1 165 -24 211 284 43 62 chr5 65308159 65308321 -137777211 + MER5A DNA MER1_type 1 159 -30 2592 68 0 0 chr5 65309188 65309499 -137776033 + AluY SINE Alu 1 311 0 490 319 132 60 chr5 65311275 65312201 -137773331 + L2 LINE L2 2279 3272 0 270 95 0 0 chr5 65312774 65312816 -137772716 + (CA)n Simple_repeat Simple_repeat 2 43 0 865 216 16 32 chr5 65312928 65313113 -137772419 - MER5A DNA MER1_type 0 189 8 205 191 0 0 chr5 65313314 65313356 -137772176 + A-rich Low_complexity Low_complexity 1 42 0 347 289 113 0 chr5 65314089 65314186 -137771346 + L2 LINE L2 3184 3291 -22 368 330 64 0 chr5 65318120 65318229 -137767303 + L2 LINE L2 3140 3255 -17 192 255 41 71 chr5 65318203 65318301 -137767231 - MIR SINE MIR -134 128 34 * 703 185 194 5 chr5 65319093 65319309 -137766223 - ORSL DNA AcHobo -10 265 9 597 285 85 61 chr5 65320807 65321183 -137764349 + MLT1K LTR MaLR 190 574 -14 859 284 60 57 chr5 65321375 65321776 -137763756 - L2 LINE L2 -2 3311 2910 204 254 18 0 chr5 65322693 65322748 -137762784 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 322 323 21 0 chr5 65322875 65322971 -137762561 - MIR3 SINE MIR -3 205 108 23 0 0 0 chr5 65323077 65323100 -137762432 + AT_rich Low_complexity Low_complexity 1 23 0 307 302 0 0 chr5 65323289 65323385 -137762147 - L1ME LINE L1 -413 5708 5613 2267 96 3 3 chr5 65323667 65323958 -137761574 - AluSg SINE Alu -17 293 3 55 76 0 0 chr5 65324184 65324302 -137761230 + AT_rich Low_complexity Low_complexity 1 118 0 261 293 19 38 chr5 65324311 65324417 -137761115 - L1P LINE L1 -1161 4985 4882 216 0 0 0 chr5 65324436 65324460 -137761072 + (CA)n Simple_repeat Simple_repeat 1 24 0 1534 197 0 11 chr5 65324898 65325167 -137760365 + AluJo SINE Alu 1 266 -46 306 378 37 9 chr5 65325605 65325822 -137759710 - L1M4 LINE L1 -2202 3944 3722 308 335 43 39 chr5 65325873 65326106 -137759426 - L1M4 LINE L1 -2503 3643 3410 201 341 55 0 chr5 65326907 65326998 -137758534 - MIR SINE MIR 0 262 167 718 277 71 51 chr5 65327189 65327442 -137758090 - MIR SINE MIR 0 262 5 3570 144 15 5 chr5 65327866 65328471 -137757061 + L1PA13 LINE L1 5542 6152 -11 237 196 0 0 chr5 65329811 65329867 -137755665 + GA-rich Low_complexity Low_complexity 3 58 0 502 352 77 30 chr5 65331061 65331399 -137754133 - L2 LINE L2 0 3313 2960 21 0 0 0 chr5 65332166 65332187 -137753345 + AT_rich Low_complexity Low_complexity 1 21 0 228 67 0 0 chr5 65333363 65333393 -137752139 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 359 251 169 51 chr5 65333954 65334149 -137751383 + MLT1I LTR MaLR 1 218 -191 2173 107 7 7 chr5 65334613 65334911 -137750621 + AluSq SINE Alu 3 300 -13 261 0 0 0 chr5 65335093 65335122 -137750410 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 854 306 4 4 chr5 65336466 65336721 -137748811 - MIR SINE MIR 0 262 8 574 266 45 60 chr5 65336956 65337215 -137748317 + MIR SINE MIR 3 261 -1 1554 208 3 7 chr5 65338200 65338488 -137747044 + AluJb SINE Alu 1 287 -25 24 0 0 0 chr5 65338959 65338983 -137746549 + AT_rich Low_complexity Low_complexity 1 24 0 219 357 54 18 chr5 65339248 65339416 -137746116 + L2 LINE L2 2886 3059 -213 414 0 0 0 chr5 65339498 65339544 -137745988 + (TG)n Simple_repeat Simple_repeat 1 46 0 231 352 0 0 chr5 65339585 65339639 -137745893 + L2 LINE L2 3139 3192 -80 6127 168 59 36 chr5 65340679 65342025 -137743507 + L1MC3 LINE L1 6410 7785 0 394 329 179 20 chr5 65342514 65342906 -137742626 - L3 LINE CR1 -143 1434 981 2524 58 0 0 chr5 65345430 65345739 -137739793 - AluY SINE Alu -2 309 1 1948 152 0 0 chr5 65346675 65346965 -137738567 + AluSx SINE Alu 1 290 -22 714 86 0 0 chr5 65346965 65347081 -137738451 + (TA)n Simple_repeat Simple_repeat 2 117 0 25 0 0 0 chr5 65347140 65347165 -137738367 + AT_rich Low_complexity Low_complexity 1 25 0 385 358 58 6 chr5 65347316 65347489 -137738043 - MIR SINE MIR -61 201 20 335 235 0 102 chr5 65348625 65348723 -137736809 - L2 LINE L2 -5 3267 3180 659 228 111 6 chr5 65349014 65349185 -137736347 - MIR SINE MIR -4 258 70 23 54 0 0 chr5 65349350 65349387 -137736145 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 65349430 65349460 -137736072 + AT_rich Low_complexity Low_complexity 1 30 0 225 248 71 97 chr5 65350397 65350510 -137735022 - MIR3 SINE MIR -5 203 94 198 64 21 64 chr5 65351824 65351871 -137733661 + (TTCTCC)n Simple_repeat Simple_repeat 4 48 0 208 358 90 15 chr5 65352529 65352663 -137732869 + MER91A DNA MER1_type 1 144 -52 359 336 65 40 chr5 65353056 65353303 -137732229 + MIR SINE MIR 3 255 -7 1017 211 22 36 chr5 65353370 65353593 -137731939 - AluJb SINE Alu -12 300 81 26 30 0 0 chr5 65353768 65353801 -137731731 + AT_rich Low_complexity Low_complexity 1 33 0 186 244 0 22 chr5 65357770 65357815 -137727717 - L2 LINE L2 -15 3298 3255 21 0 0 0 chr5 65358934 65358955 -137726577 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 65361845 65361893 -137723639 + AT_rich Low_complexity Low_complexity 1 48 0 833 279 39 0 chr5 65361900 65362129 -137723403 - MIR SINE MIR -20 242 5 627 153 59 17 chr5 65363313 65363431 -137722101 + FLAM_A SINE Alu 10 132 -10 24 53 0 0 chr5 65364822 65364860 -137720672 + AT_rich Low_complexity Low_complexity 1 38 0 288 360 0 4 chr5 65365726 65365858 -137719674 + MIR SINE MIR 33 161 -65 37 23 0 0 chr5 65365859 65365903 -137719629 + AT_rich Low_complexity Low_complexity 1 44 0 4033 144 56 111 chr5 65366396 65367199 -137718333 + L1MCa LINE L1 3 849 -5577 423 0 0 0 chr5 65367199 65367246 -137718286 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1886 153 0 3 chr5 65367246 65367528 -137718004 - AluSq SINE Alu -32 281 1 4033 144 56 111 chr5 65367528 65367677 -137717855 + L1MCa LINE L1 847 903 -5523 1355 168 25 18 chr5 65367677 65367963 -137717569 + L1MC1 LINE L1 6037 6324 -9 30 0 0 0 chr5 65368906 65368936 -137716596 + AT_rich Low_complexity Low_complexity 1 30 0 229 172 31 0 chr5 65369118 65369182 -137716350 + (TA)n Simple_repeat Simple_repeat 2 67 0 294 244 33 67 chr5 65369395 65369485 -137716047 + L2 LINE L2 3202 3288 -25 22 35 0 0 chr5 65369519 65369548 -137715984 + AT_rich Low_complexity Low_complexity 1 29 0 249 33 0 0 chr5 65370421 65370451 -137715081 + (GA)n Simple_repeat Simple_repeat 1 30 0 613 214 15 15 chr5 65371709 65371840 -137713692 + FLAM_C SINE Alu 7 137 -6 1724 113 82 0 chr5 65372129 65372296 -137713236 - AluSq SINE Alu -2 311 114 197 33 33 0 chr5 65372296 65372326 -137713206 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1724 113 82 0 chr5 65372326 65372414 -137713118 - AluSq SINE Alu -199 114 35 552 241 127 34 chr5 65373257 65373493 -137712039 + MLT1L LTR MaLR 352 609 -6 7154 144 152 6 chr5 65374753 65376562 -137708970 + L1MA8 LINE L1 3562 5652 -639 1817 158 31 26 chr5 65376562 65376948 -137708584 + L1MA8 LINE L1 5898 6286 -5 180 276 198 9 chr5 65377116 65377232 -137708300 + MIR SINE MIR 119 256 -6 492 293 83 45 chr5 65377445 65377892 -137707640 + L1MC/D LINE L1 5284 5747 -2061 234 229 0 0 chr5 65378905 65378975 -137706557 + (TA)n Simple_repeat Simple_repeat 2 71 0 532 219 55 20 chr5 65379301 65379447 -137706085 - MIR SINE MIR -66 196 46 526 248 101 7 chr5 65379577 65379726 -137705806 - MIR SINE MIR -27 235 73 410 227 155 7 chr5 65381766 65381963 -137703569 + MLT1F1 LTR MaLR 174 425 -117 575 244 41 0 chr5 65382096 65382219 -137703313 + MLT1I LTR MaLR 9 136 -273 333 0 0 0 chr5 65382256 65382293 -137703239 + (CA)n Simple_repeat Simple_repeat 2 38 0 593 275 93 45 chr5 65382356 65382603 -137702929 + MLT1I LTR MaLR 124 382 -27 1732 203 34 6 chr5 65383966 65384320 -137701212 - MLT1A1 LTR MaLR 0 365 2 578 274 49 25 chr5 65384340 65384544 -137700988 + L2 LINE L2 3089 3297 -16 215 31 31 0 chr5 65385123 65385155 -137700377 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1850 311 111 21 chr5 65385343 65386558 -137698974 - L2 LINE L2 0 3313 1999 28 86 0 0 chr5 65386856 65386926 -137698606 + AT_rich Low_complexity Low_complexity 1 70 0 1880 166 7 0 chr5 65387731 65388027 -137697505 - AluJb SINE Alu -14 298 1 1693 39 10 0 chr5 65388867 65389074 -137696458 - L1PA4 LINE L1 0 6155 5947 402 21 0 0 chr5 65389812 65389859 -137695673 + (TA)n Simple_repeat Simple_repeat 2 48 0 1561 225 99 24 chr5 65390333 65390755 -137694777 + MLT1C LTR MaLR 14 467 0 687 368 95 23 chr5 65391243 65391612 -137693920 - L2 LINE L2 -338 2976 2550 1199 212 109 41 chr5 65391612 65391951 -137693581 + MLT1A1 LTR MaLR 1 362 -3 687 368 95 23 chr5 65391951 65392151 -137693381 - L2 LINE L2 -764 2550 2366 453 314 13 25 chr5 65392333 65392492 -137693040 - MER5B DNA MER1_type -21 157 1 195 319 13 64 chr5 65392570 65392727 -137692805 - L2 LINE L2 -1265 2049 1901 476 299 35 25 chr5 65393322 65393519 -137692013 - L2 LINE L2 -2399 915 717 414 269 92 0 chr5 65393516 65393635 -137691897 + MER5B DNA MER1_type 5 134 -44 * 285 305 0 12 chr5 65395082 65395164 -137690368 + (CATA)n Simple_repeat Simple_repeat 3 83 0 306 263 39 51 chr5 65395893 65396049 -137689483 - MER104 DNA Tc2 0 180 27 329 175 0 16 chr5 65396165 65396228 -137689304 + MER3 DNA MER1_type 1 62 -147 288 331 53 8 chr5 65396812 65396945 -137688587 - MIR SINE MIR 0 262 124 1668 232 78 65 chr5 65397886 65398485 -137687047 + MLT1E3 LTR MaLR 10 616 -8 2270 72 0 28 chr5 65398714 65399036 -137686496 + AluY SINE Alu 3 316 0 489 142 0 47 chr5 65399209 65399315 -137686217 + L1MA9 LINE L1 6209 6309 -3 437 176 0 0 chr5 65401277 65401318 -137684214 + MER3 DNA MER1_type 7 47 -162 361 141 154 0 chr5 65401318 65401396 -137684136 - MER3 DNA MER1_type 0 209 120 347 322 90 31 chr5 65401498 65401713 -137683819 - L2 LINE L2 -24 3289 3055 2752 94 8 0 chr5 65401713 65402085 -137683447 - THE1C LTR MaLR 0 375 1 347 322 90 31 chr5 65402085 65402124 -137683408 - L2 LINE L2 -258 3055 3020 2033 179 12 51 chr5 65402127 65402613 -137682919 + MLT1C LTR MaLR 1 467 0 356 333 23 29 chr5 65402652 65402826 -137682706 - MIR SINE MIR -71 191 19 272 353 29 14 chr5 65403768 65403907 -137681625 + MIR SINE MIR 59 199 -63 622 291 29 29 chr5 65404008 65404249 -137681283 - MIR SINE MIR -13 249 9 30348 109 12 47 chr5 65404369 65409363 -137676169 + L1PA7 LINE L1 13 4665 -1489 194 0 39 0 chr5 65409363 65409389 -137676143 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 30348 109 12 47 chr5 65409389 65410744 -137674788 + L1PA7 LINE L1 4665 6066 -88 25 0 0 0 chr5 65412023 65412048 -137673484 + AT_rich Low_complexity Low_complexity 1 25 0 239 279 0 0 chr5 65412548 65412609 -137672923 - L2 LINE L2 -964 2350 2290 297 0 0 0 chr5 65412731 65412764 -137672768 + (TG)n Simple_repeat Simple_repeat 1 33 0 355 333 25 39 chr5 65413075 65413266 -137672266 - MIR SINE MIR -68 140 1 587 188 14 14 chr5 65414152 65414290 -137671242 - L1MA10 LINE L1 -7 6327 6190 259 301 0 0 chr5 65414854 65414937 -137670595 + L1MC/D LINE L1 5716 5798 -2010 31 99 0 0 chr5 65415156 65415257 -137670275 + AT_rich Low_complexity Low_complexity 1 101 0 2437 104 8 8 chr5 65415286 65415641 -137669891 + THE1A LTR MaLR 1 355 0 1145 236 73 18 chr5 65415912 65416294 -137669238 + L1MEc LINE L1 36 438 -5958 435 248 35 30 chr5 65416324 65416472 -137669060 + L1MA10 LINE L1 5989 6302 -23 1885 268 53 6 chr5 65418126 65418668 -137666864 + MER69 DNA AcHobo 1 568 -658 1699 241 25 19 chr5 65418656 65419179 -137666353 + MER69 DNA AcHobo 2000 2525 -1 * 22 0 0 0 chr5 65419400 65419422 -137666110 + AT_rich Low_complexity Low_complexity 1 22 0 2273 97 0 0 chr5 65419658 65419958 -137665574 + AluY SINE Alu 1 300 -11 25 51 0 0 chr5 65420364 65420403 -137665129 + AT_rich Low_complexity Low_complexity 1 39 0 468 322 122 50 chr5 65421586 65421962 -137663570 + L3 LINE CR1 1174 1576 -1 414 0 0 0 chr5 65422809 65422855 -137662677 + (T)n Simple_repeat Simple_repeat 1 46 0 26 50 0 0 chr5 65423853 65423893 -137661639 + AT_rich Low_complexity Low_complexity 1 40 0 2349 50 0 3 chr5 65423896 65424226 -137661306 + AluY SINE Alu 1 329 0 21 0 0 0 chr5 65424495 65424516 -137661016 + AT_rich Low_complexity Low_complexity 1 21 0 204 163 0 0 chr5 65424658 65424701 -137660831 + GA-rich Low_complexity Low_complexity 4 46 0 1098 229 122 36 chr5 65424772 65425157 -137660375 + LTR16A LTR ERVL 28 445 -5 21 36 0 0 chr5 65425917 65425945 -137659587 + AT_rich Low_complexity Low_complexity 1 28 0 1430 99 20 0 chr5 65426128 65426329 -137659203 - AluSq SINE Alu -9 304 100 307 251 18 24 chr5 65426726 65426848 -137658684 + GA-rich Low_complexity Low_complexity 2 124 -43 1539 199 3 0 chr5 65426848 65427145 -137658387 + AluJb SINE Alu 1 298 -14 307 251 18 24 chr5 65427145 65427189 -137658343 + GA-rich Low_complexity Low_complexity 124 167 0 2450 177 112 6 chr5 65427495 65428032 -137657500 - L1MB8 LINE L1 -2 6176 5583 1352 60 5 75 chr5 65428492 65428693 -137656839 - MER107 DNA MER1_type -8 189 3 213 349 83 8 chr5 65428694 65428826 -137656706 - MIR3 SINE MIR -36 172 31 421 220 23 28 chr5 65429045 65429222 -137656310 + (CA)n Simple_repeat Simple_repeat 1 176 0 209 320 110 0 chr5 65429891 65429991 -137655541 + MIR SINE MIR 152 262 0 298 262 65 87 chr5 65431036 65431265 -137654267 - MIR SINE MIR 0 262 39 2247 66 0 11 chr5 65431309 65431595 -137653937 - AluY SINE Alu -16 295 13 219 88 0 0 chr5 65431731 65431765 -137653767 + (TG)n Simple_repeat Simple_repeat 2 35 0 722 193 29 41 chr5 65431771 65431942 -137653590 + FRAM SINE Alu 1 161 -15 21 0 0 0 chr5 65432799 65432820 -137652712 + AT_rich Low_complexity Low_complexity 1 21 0 1415 225 0 14 chr5 65432826 65433110 -137652422 + AluSx SINE Alu 1 280 -32 261 0 0 0 chr5 65433114 65433143 -137652389 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 243 0 0 0 chr5 65433998 65434025 -137651507 + (TA)n Simple_repeat Simple_repeat 2 28 0 383 250 44 59 chr5 65434914 65435050 -137650482 + MLT1I LTR MaLR 108 215 -194 23 0 0 0 chr5 65435653 65435676 -137649856 + AT_rich Low_complexity Low_complexity 1 23 0 2029 131 0 19 chr5 65436085 65436398 -137649134 - AluSx SINE Alu -5 307 1 1815 184 3 57 chr5 65438558 65438890 -137646642 + MLT1A1 LTR MaLR 2 312 -53 2194 101 0 0 chr5 65438890 65439188 -137646344 - AluSx SINE Alu -14 298 1 1815 184 3 57 chr5 65439188 65439240 -137646292 + MLT1A1 LTR MaLR 312 365 0 246 62 0 0 chr5 65440221 65440253 -137645279 + (CATTG)n Simple_repeat Simple_repeat 2 33 0 985 154 0 0 chr5 65440253 65440396 -137645136 - AluJb SINE Alu -26 286 144 241 348 93 29 chr5 65440411 65440721 -137644811 + L2 LINE L2 2301 2630 -684 1756 172 7 13 chr5 65441358 65441851 -137643681 + AluJo SINE Alu 4 494 0 2029 95 6 57 chr5 65442023 65442338 -137643194 - AluSp SINE Alu -14 299 1 21 71 0 0 chr5 65442372 65442414 -137643118 + AT_rich Low_complexity Low_complexity 1 42 0 558 253 34 14 chr5 65443058 65443204 -137642328 + MIR SINE MIR 114 262 0 2142 162 0 11 chr5 65443243 65443607 -137641925 + MER46B DNA MER2_type 2 236 0 662 215 7 22 chr5 65443759 65443894 -137641638 - FLAM_A SINE Alu 0 133 1 1794 181 3 0 chr5 65444452 65444761 -137640771 + AluJb SINE Alu 1 310 -2 253 204 21 190 chr5 65447230 65447372 -137638160 + L2 LINE L2 3155 3272 0 297 241 194 9 chr5 65448430 65448538 -137636994 + MIR SINE MIR 20 147 -115 1843 147 0 14 chr5 65448637 65448929 -137636603 - AluJb SINE Alu -24 288 1 207 0 0 0 chr5 65449034 65449057 -137636475 + (CA)n Simple_repeat Simple_repeat 2 24 0 1877 114 91 6 chr5 65449606 65449957 -137635575 - L1MA5A LINE L1 -3 6294 5914 1915 137 17 0 chr5 65451405 65451698 -137633834 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 65452285 65452306 -137633226 + AT_rich Low_complexity Low_complexity 1 21 0 4901 212 67 58 chr5 65453463 65454382 -137631150 + L1MC4 LINE L1 6217 7125 -917 1564 182 84 45 chr5 65454382 65454556 -137630976 + MSTD LTR MaLR 3 169 -227 2216 82 7 10 chr5 65454556 65454859 -137630673 + AluY SINE Alu 1 302 -9 1564 182 84 45 chr5 65454859 65455063 -137630469 + MSTD LTR MaLR 169 396 0 4901 212 67 58 chr5 65455063 65455419 -137630113 + L1MC4 LINE L1 7125 7476 -566 1874 206 6 8 chr5 65455419 65455783 -137629749 + MLT1A1 LTR MaLR 1 363 -2 4901 212 67 58 chr5 65455783 65456339 -137629193 + L1MC4 LINE L1 7476 8042 0 229 287 139 16 chr5 65457233 65457355 -137628177 + L2 LINE L2 3177 3313 0 818 330 91 5 chr5 65457562 65457989 -137627543 + LTR16B LTR ERVL 1 464 0 235 281 150 26 chr5 65458140 65458293 -137627239 - L3b LINE CR1 -120 1463 1292 765 275 32 32 chr5 65459160 65459411 -137626121 - MIR SINE MIR -10 252 2 288 208 19 0 chr5 65459513 65459566 -137625966 + L2 LINE L2 3259 3312 -1 29493 52 3 1 chr5 65460162 65464670 -137620862 + L1PA5 LINE L1 1633 6153 -1 263 302 104 28 chr5 65465733 65465915 -137619617 + MIR SINE MIR 65 260 -2 27 29 0 0 chr5 65466117 65466151 -137619381 + AT_rich Low_complexity Low_complexity 1 34 0 2028 133 13 23 chr5 65468539 65468848 -137616684 - AluJb SINE Alu -6 306 1 398 228 228 0 chr5 65469068 65469213 -137616319 - MIR SINE MIR -56 206 29 690 253 63 66 chr5 65469250 65469551 -137615981 - L2 LINE L2 -5 3308 3009 253 302 142 12 chr5 65470113 65470282 -137615250 - L2 LINE L2 0 3313 3123 500 259 75 0 chr5 65470466 65470613 -137614919 - MIR SINE MIR -59 203 46 185 285 46 69 chr5 65470841 65470971 -137614561 + MIR SINE MIR 59 185 -77 21 36 0 0 chr5 65472281 65472309 -137613223 + AT_rich Low_complexity Low_complexity 1 28 0 296 334 175 15 chr5 65473789 65474188 -137611344 + L2 LINE L2 2580 3042 -230 207 100 0 0 chr5 65474420 65474450 -137611082 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 2294 88 0 10 chr5 65475069 65475365 -137610167 - AluY SINE Alu -18 293 1 298 133 0 0 chr5 65475433 65475478 -137610054 + AluJ/FRAM SINE Alu 223 267 -35 2043 138 0 31 chr5 65475517 65475835 -137609697 + AluJb SINE Alu 1 308 -4 191 161 0 0 chr5 65476563 65476594 -137608938 - L3 LINE CR1 -1017 560 530 476 273 63 7 chr5 65476594 65476737 -137608795 + L3 LINE CR1 514 664 -913 222 207 0 0 chr5 65476893 65476951 -137608581 + GA-rich Low_complexity Low_complexity 2 59 0 189 338 0 13 chr5 65478638 65478715 -137606817 - MIR SINE MIR -14 248 173 256 279 16 0 chr5 65478813 65478874 -137606658 + MIR SINE MIR 5 66 -196 338 257 156 0 chr5 65480220 65480329 -137605203 - L2 LINE L2 0 3272 3147 323 239 15 0 chr5 65480373 65480440 -137605092 + MER58A DNA MER1_type 1 68 -39 4046 92 20 8 chr5 65480447 65481225 -137604307 - L1PA10 LINE L1 0 6131 5330 842 161 97 0 chr5 65481227 65481413 -137604119 + L1P LINE L1 3094 3297 -2849 378 304 25 70 chr5 65481956 65482114 -137603418 - MIR3 SINE MIR -7 201 51 223 333 85 18 chr5 65483771 65483936 -137601596 - MIR SINE MIR -3 259 84 35 71 0 0 chr5 65484288 65484358 -137601174 + AT_rich Low_complexity Low_complexity 1 70 0 252 0 0 0 chr5 65485336 65485364 -137600168 + (TA)n Simple_repeat Simple_repeat 2 29 0 31 0 0 0 chr5 65485558 65485589 -137599943 + AT_rich Low_complexity Low_complexity 1 31 0 2090 150 50 3 chr5 65486174 65486513 -137599019 + LTR18A LTR ERVL 3 357 0 2524 207 6 27 chr5 65486527 65487457 -137598075 + HERVL18 LTR ERVL 9 1614 -4433 1394 131 22 2 chr5 65487490 65487760 -137597772 + HERVL18 LTR ERVL 2120 2452 -3595 * 5451 157 2 22 chr5 65487759 65488636 -137596896 + HERVL18 LTR ERVL 2720 3579 -2468 619 129 21 0 chr5 65488638 65488731 -137596801 + HERVL18 LTR ERVL 4394 4488 -1559 563 226 0 0 chr5 65488789 65488891 -137596641 + HERVL18 LTR ERVL 5946 6047 0 2403 121 29 3 chr5 65489013 65489361 -137596171 + LTR18A LTR ERVL 1 357 0 388 297 59 45 chr5 65489362 65489584 -137595948 + L1ME LINE L1 5483 5707 -455 183 80 0 0 chr5 65489587 65489612 -137595920 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 533 189 114 23 chr5 65490698 65490830 -137594702 - MIR SINE MIR -3 259 116 217 275 42 92 chr5 65490861 65490981 -137594551 - MER5A DNA MER1_type -7 182 69 2003 202 21 7 chr5 65492099 65492529 -137593003 + MER63B DNA MER1_type 1 436 0 214 298 18 0 chr5 65492686 65492743 -137592789 - MIR3 SINE MIR -4 204 147 1431 201 66 7 chr5 65493103 65493376 -137592156 - AluJo SINE Alu -23 289 1 235 321 27 71 chr5 65493839 65493951 -137591581 - MER5A DNA MER1_type -25 164 58 576 262 21 0 chr5 65494358 65494499 -137591033 - MIR SINE MIR -2 260 117 485 299 94 20 chr5 65496193 65496394 -137589138 + MIR SINE MIR 47 262 0 183 156 0 0 chr5 65496865 65496897 -137588635 + T-rich Low_complexity Low_complexity 4 35 0 653 213 35 7 chr5 65497286 65497427 -137588105 - L1PA15 LINE L1 0 6165 6021 329 305 25 17 chr5 65497843 65497961 -137587571 + MIR SINE MIR 37 155 -107 291 278 180 0 chr5 65498799 65498966 -137586566 + MIR SINE MIR 31 229 -33 1441 197 91 29 chr5 65499251 65499602 -137585930 + MLT1A2 LTR MaLR 1 373 -1 445 268 89 8 chr5 65499838 65499961 -137585571 - L2 LINE L2 -2 3270 3138 329 318 39 26 chr5 65500557 65500711 -137584821 + MIR SINE MIR 21 176 -86 463 313 8 16 chr5 65501045 65501173 -137584359 - MIR SINE MIR -111 151 25 22 0 0 0 chr5 65501567 65501589 -137583943 + AT_rich Low_complexity Low_complexity 1 22 0 255 282 0 13 chr5 65503953 65504031 -137581501 + MLT1L LTR MaLR 1 77 -538 359 294 66 90 chr5 65504214 65504503 -137581029 + MLT1L LTR MaLR 228 613 -2 327 65 0 0 chr5 65505327 65505373 -137580159 + (CA)n Simple_repeat Simple_repeat 1 46 0 1973 141 0 14 chr5 65508606 65508903 -137576629 - AluSx SINE Alu -19 293 1 330 53 175 0 chr5 65509007 65509064 -137576468 + L1PA4 LINE L1 6085 6151 -4 2284 122 0 0 chr5 65509329 65509640 -137575892 + AluSx SINE Alu 1 311 -1 266 268 0 32 chr5 65509695 65509790 -137575742 + L1ME LINE L1 5678 5769 -352 235 296 62 0 chr5 65510372 65510453 -137575079 + MIR3 SINE MIR 85 170 -38 22 0 0 0 chr5 65510639 65510661 -137574871 + AT_rich Low_complexity Low_complexity 1 22 0 248 213 27 13 chr5 65510727 65510802 -137574730 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 22 0 0 0 chr5 65511322 65511344 -137574188 + AT_rich Low_complexity Low_complexity 1 22 0 33 25 0 0 chr5 65511617 65511657 -137573875 + AT_rich Low_complexity Low_complexity 1 40 0 1884 176 0 0 chr5 65512070 65512383 -137573149 + AluSx SINE Alu 1 313 0 480 286 27 7 chr5 65513667 65513814 -137571718 - MIR3 SINE MIR -27 181 32 297 267 140 47 chr5 65514076 65514226 -137571306 + MIR3 SINE MIR 15 178 -30 222 37 0 0 chr5 65514962 65514989 -137570543 + (CAT)n Simple_repeat Simple_repeat 2 28 0 2155 117 0 0 chr5 65515015 65515296 -137570236 - AluSq SINE Alu -32 281 1 1722 196 58 3 chr5 65516254 65516648 -137568884 + L1M3 LINE L1 5277 5691 -480 232 127 73 0 chr5 65516874 65516929 -137568603 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 22 35 0 0 chr5 65519016 65519045 -137566487 + AT_rich Low_complexity Low_complexity 1 29 0 2789 236 94 180 chr5 65519473 65521033 -137564499 + L2 LINE L2 136 1828 -1485 1489 252 67 26 chr5 65521033 65521212 -137564320 + MLT1F LTR MaLR 41 211 -331 4407 37 0 11 chr5 65521212 65521752 -137563780 + L1PA5 LINE L1 5621 6154 0 1489 252 67 26 chr5 65521752 65522032 -137563500 + MLT1F LTR MaLR 211 519 -23 2789 236 94 180 chr5 65522032 65522182 -137563350 + L2 LINE L2 1828 1989 -1324 1901 130 43 10 chr5 65522182 65522483 -137563049 - AluSx SINE Alu -1 311 1 2789 236 94 180 chr5 65522483 65523586 -137561946 + L2 LINE L2 1989 3201 -112 1734 159 6 38 chr5 65523586 65523901 -137561631 + AluJo SINE Alu 1 305 -7 2789 236 94 180 chr5 65523901 65524005 -137561527 + L2 LINE L2 3201 3312 -1 333 0 0 0 chr5 65524507 65524544 -137560988 + (TG)n Simple_repeat Simple_repeat 1 37 0 186 43 0 0 chr5 65524550 65524573 -137560959 + (CGAG)n Simple_repeat Simple_repeat 2 24 0 252 296 78 17 chr5 65524789 65524904 -137560628 + MIR SINE MIR 108 229 -33 235 328 62 39 chr5 65525255 65525383 -137560149 - MIR SINE MIR -71 191 61 287 358 11 11 chr5 65525396 65525491 -137560041 - L2 LINE L2 -21 3251 3157 745 204 51 37 chr5 65525500 65525716 -137559816 + MER20 DNA MER1_type 1 219 0 936 212 58 0 chr5 65525852 65526041 -137559491 + MER58A DNA MER1_type 1 200 -24 2121 116 7 0 chr5 65526980 65527264 -137558268 + AluSx SINE Alu 1 286 -26 804 233 17 6 chr5 65527364 65527540 -137557992 + MER45A DNA AcHobo 1 178 0 252 0 0 0 chr5 65527730 65527758 -137557774 + (T)n Simple_repeat Simple_repeat 1 28 0 982 272 66 27 chr5 65527976 65528417 -137557115 - MER113 DNA MER1_type? -33 488 31 41 48 0 0 chr5 65528920 65528982 -137556550 + AT_rich Low_complexity Low_complexity 1 62 0 291 71 0 0 chr5 65529438 65529480 -137556052 + (CA)n Simple_repeat Simple_repeat 2 43 0 201 400 51 42 chr5 65529656 65529743 -137555789 - L2 LINE L2 -12 3260 3175 2019 118 45 0 chr5 65529743 65530030 -137555502 - AluSx SINE Alu -12 300 1 201 400 51 42 chr5 65530030 65530157 -137555375 - L2 LINE L2 -97 3175 3044 275 269 70 92 chr5 65531036 65531260 -137554272 + MIR3 SINE MIR 12 245 -17 5379 107 103 7 chr5 65533906 65534836 -137550696 - Tigger3b DNA MER2_type -27 1204 185 297 244 24 0 chr5 65534979 65535102 -137550430 + (TA)n Simple_repeat Simple_repeat 1 126 0 235 282 19 0 chr5 65535348 65535508 -137550024 + (TATATG)n Simple_repeat Simple_repeat 1 163 0 544 228 0 22 chr5 65535509 65535693 -137549839 + (TA)n Simple_repeat Simple_repeat 1 180 0 351 0 0 0 chr5 65535768 65535807 -137549725 + (TA)n Simple_repeat Simple_repeat 1 39 0 1296 56 0 0 chr5 65536086 65536247 -137549285 + L1PA3 LINE L1 5992 6152 -3 2102 131 0 3 chr5 65537227 65537532 -137548000 - AluSx SINE Alu -8 304 1 230 329 12 47 chr5 65537583 65537668 -137547864 - L2 LINE L2 -4 3268 3187 375 339 70 4 chr5 65537706 65537933 -137547599 + L3 LINE CR1 1264 1505 -72 825 286 117 22 chr5 65538057 65538424 -137547108 + MLT1J2 LTR MaLR 49 450 0 194 265 6 122 chr5 65542819 65543000 -137542532 - L2 LINE L2 -33 3280 3121 201 143 0 0 chr5 65543159 65543194 -137542338 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 292 253 7 137 chr5 65543344 65543424 -137542108 - L2 LINE L2 -5 3267 3212 1786 170 3 3 chr5 65543424 65543742 -137541790 + AluJb SINE Alu 1 318 0 292 253 7 137 chr5 65543742 65543806 -137541726 - L2 LINE L2 -60 3212 3141 352 45 0 0 chr5 65544297 65544341 -137541191 - MADE1 DNA Mariner -3 77 34 506 221 69 103 chr5 65545307 65545511 -137540021 + MIR SINE MIR 53 249 -13 458 326 86 18 chr5 65545554 65545775 -137539757 - MIR SINE MIR -23 239 4 23 54 0 0 chr5 65546098 65546135 -137539397 + AT_rich Low_complexity Low_complexity 1 37 0 2117 125 3 22 chr5 65547196 65547515 -137538017 - AluSq SINE Alu 0 313 1 378 277 68 34 chr5 65547913 65548061 -137537471 - MIR SINE MIR -28 234 82 253 341 0 11 chr5 65548707 65548795 -137536737 + MIR SINE MIR 43 129 -79 251 291 13 0 chr5 65549444 65549523 -137536009 + MER103 DNA DNA 30 109 -57 364 275 178 1 chr5 65549978 65550120 -137535412 - MER5A DNA MER1_type -2 187 11 24 32 0 0 chr5 65550469 65550500 -137535032 + AT_rich Low_complexity Low_complexity 1 31 0 201 283 19 0 chr5 65550553 65550606 -137534926 - L2 LINE L2 0 3272 3219 2004 139 10 0 chr5 65551393 65551688 -137533844 + AluSx SINE Alu 7 304 -8 732 204 12 0 chr5 65551869 65552031 -137533501 + MER3 DNA MER1_type 40 203 -6 666 266 101 20 chr5 65552181 65552478 -137533054 - L1ME LINE L1 -301 5820 5500 2044 84 0 11 chr5 65552586 65552848 -137532684 + AluSq SINE Alu 1 259 -54 188 236 55 0 chr5 65553331 65553386 -137532146 + MIR SINE MIR 90 147 -61 2236 116 3 0 chr5 65553388 65553691 -137531841 + AluSq SINE Alu 1 304 -9 1706 211 137 64 chr5 65553720 65554009 -137531523 + MER63C DNA MER1_type 225 491 -569 2403 94 0 0 chr5 65554009 65554318 -137531214 + AluSg1 SINE Alu 1 309 0 1706 211 137 64 chr5 65554318 65554686 -137530846 + MER63C DNA MER1_type 491 930 0 337 260 110 20 chr5 65554686 65554832 -137530700 - L1ME LINE L1 -767 5379 5221 919 181 12 23 chr5 65555687 65555858 -137529674 + MER5B DNA MER1_type 7 175 -3 1680 176 37 3 chr5 65556286 65556582 -137528950 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr5 65556741 65556765 -137528767 + AT_rich Low_complexity Low_complexity 1 24 0 2215 127 32 46 chr5 65557217 65557586 -137527946 + THE1B LTR MaLR 1 364 0 241 263 18 0 chr5 65557885 65557942 -137527590 - L2 LINE L2 0 3272 3215 212 270 108 49 chr5 65560383 65560568 -137524964 + L3 LINE CR1 656 851 -726 323 369 93 23 chr5 65561603 65561999 -137523533 + L3 LINE CR1 1142 1565 -12 343 217 22 22 chr5 65563747 65563839 -137521693 - U2 snRNA snRNA -96 92 1 369 275 45 7 chr5 65564261 65564445 -137521087 + MIR SINE MIR 15 208 -54 289 321 0 28 chr5 65564737 65564843 -137520689 - MIR SINE MIR -112 150 48 333 0 0 0 chr5 65564918 65564955 -137520577 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 323 171 25 chr5 65565154 65565587 -137519945 - L2 LINE L2 -528 2786 2291 696 186 0 0 chr5 65566535 65566702 -137518830 + (CA)n Simple_repeat Simple_repeat 2 168 0 204 40 0 0 chr5 65566989 65567014 -137518518 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 253 345 103 6 chr5 65567444 65567609 -137517923 + MIR SINE MIR 28 208 -54 1488 187 34 76 chr5 65568246 65568653 -137516879 + MLT1B LTR MaLR 1 390 0 225 278 96 26 chr5 65568907 65569022 -137516510 + MIR SINE MIR 8 130 -132 350 219 0 10 chr5 65570178 65570274 -137515258 + MLT1B LTR MaLR 253 347 -43 231 81 0 0 chr5 65570388 65570425 -137515107 + L2 LINE L2 3277 3313 0 1602 189 14 4 chr5 65570475 65570750 -137514782 + AluJb SINE Alu 5 282 -30 432 37 0 0 chr5 65570772 65570826 -137514706 + (TG)n Simple_repeat Simple_repeat 1 54 0 327 302 32 16 chr5 65573191 65573317 -137512215 + MIR3 SINE MIR 1 128 -80 239 184 0 0 chr5 65574792 65574830 -137510702 + MER5B DNA MER1_type 125 162 -16 186 43 0 0 chr5 65574949 65574972 -137510560 + (T)n Simple_repeat Simple_repeat 1 23 0 1825 112 0 0 chr5 65575060 65575293 -137510239 - AluSc SINE Alu -76 233 1 713 186 9 130 chr5 65575772 65575903 -137509629 + MER5A DNA MER1_type 1 98 -91 2171 96 24 0 chr5 65575903 65576195 -137509337 - AluSx SINE Alu -13 299 1 713 186 9 130 chr5 65576195 65576278 -137509254 + MER5A DNA MER1_type 98 189 0 2936 127 36 4 chr5 65576630 65577134 -137508398 - L1PB2 LINE L1 -1 6150 5631 342 290 59 24 chr5 65577191 65577360 -137508172 + L1ME3A LINE L1 5815 5989 -181 2383 112 0 3 chr5 65577376 65577689 -137507843 - AluSx SINE Alu 0 312 1 363 232 50 0 chr5 65578033 65578132 -137507400 + L1ME3A LINE L1 6067 6170 0 794 153 44 27 chr5 65579305 65579488 -137506044 + L1MA8 LINE L1 6083 6268 -23 262 236 79 11 chr5 65579767 65579856 -137505676 + MER115 DNA AcHobo 1 95 -598 511 320 120 15 chr5 65579929 65580263 -137505269 + MER115 DNA AcHobo 205 573 -120 562 278 33 6 chr5 65580304 65580484 -137505048 + MER115 DNA AcHobo 509 693 0 318 233 44 11 chr5 65580484 65580574 -137504958 + MER5A DNA MER1_type 74 166 -23 270 259 59 0 chr5 65581089 65581174 -137504358 + MER5B DNA MER1_type 12 101 -77 246 32 0 0 chr5 65581179 65581210 -137504322 + (TG)n Simple_repeat Simple_repeat 2 32 0 452 318 74 0 chr5 65584303 65584451 -137501081 + MIR SINE MIR 27 185 -77 2261 112 0 10 chr5 65584983 65585295 -137500237 + AluSx SINE Alu 1 309 -3 333 0 0 0 chr5 65586040 65586077 -137499455 + (CA)n Simple_repeat Simple_repeat 2 38 0 874 193 29 0 chr5 65586791 65586962 -137498570 + MER58A DNA MER1_type 49 224 0 232 330 26 35 chr5 65587833 65587948 -137497584 + L3 LINE CR1 191 304 -1273 555 271 85 5 chr5 65587994 65588193 -137497339 + MIR SINE MIR 4 218 -44 376 342 124 9 chr5 65588261 65588486 -137497046 + L3 LINE CR1 405 655 -922 207 304 54 0 chr5 65588610 65588666 -137496866 + L3 LINE CR1 1430 1488 -89 331 289 66 16 chr5 65588713 65588834 -137496698 - L2 LINE L2 0 3313 3187 188 301 193 0 chr5 65588874 65588957 -137496575 + MIR SINE MIR 51 149 -113 253 247 258 0 chr5 65588983 65589080 -137496452 - L2 LINE L2 0 3313 3192 379 270 71 40 chr5 65589887 65590013 -137495519 - L2 LINE L2 -1 3312 3183 358 182 142 10 chr5 65590160 65590286 -137495246 + MLT1B LTR MaLR 34 178 -196 674 238 32 11 chr5 65590345 65590534 -137494998 + MLT1B LTR MaLR 184 376 -14 190 240 207 0 chr5 65590542 65590663 -137494869 - L2 LINE L2 -165 3148 3003 884 208 16 0 chr5 65590827 65591010 -137494522 + MIR SINE MIR 77 262 0 253 267 0 0 chr5 65591010 65591070 -137494462 + (CTA)n Simple_repeat Simple_repeat 2 61 0 222 367 51 0 chr5 65592561 65592690 -137492842 + MIR SINE MIR 49 184 -64 230 211 0 0 chr5 65593455 65593551 -137491981 + AluJ/monomer SINE Alu 250 302 0 796 235 45 10 chr5 65593952 65594152 -137491380 + MER63A DNA MER1_type 4 210 0 206 170 0 21 chr5 65594681 65594728 -137490804 + T-rich Low_complexity Low_complexity 5 50 0 420 329 120 34 chr5 65595856 65596325 -137489207 + L2 LINE L2 2681 3188 -125 582 228 84 40 chr5 65596334 65596632 -137488900 - MER33 DNA MER1_type 0 324 14 520 256 0 47 chr5 65596654 65596783 -137488749 + L2 LINE L2 3191 3313 0 390 39 0 0 chr5 65598774 65598825 -137486707 - L1PA6 LINE L1 -2 6152 6102 249 83 0 0 chr5 65601487 65601523 -137484009 + (CA)n Simple_repeat Simple_repeat 2 37 0 189 0 0 0 chr5 65603669 65603690 -137481842 + (A)n Simple_repeat Simple_repeat 1 21 0 301 308 47 52 chr5 65603815 65603987 -137481545 - MIR SINE MIR -31 231 61 216 347 0 28 chr5 65605116 65605188 -137480344 + MIR3 SINE MIR 92 161 -47 447 320 20 14 chr5 65607422 65607569 -137477963 + MIR SINE MIR 6 153 -109 533 339 71 0 chr5 65607572 65607755 -137477777 - MER91A DNA MER1_type 0 196 1 29 60 0 0 chr5 65607945 65607995 -137477537 + AT_rich Low_complexity Low_complexity 1 50 0 519 248 55 106 chr5 65608263 65608481 -137477051 + MIR SINE MIR 33 239 -23 255 173 0 0 chr5 65608493 65608545 -137476987 + (CAT)n Simple_repeat Simple_repeat 3 54 0 739 48 19 0 chr5 65608960 65609064 -137476468 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 276 243 0 14 chr5 65609074 65609144 -137476388 + GA-rich Low_complexity Low_complexity 2 70 0 353 194 0 0 chr5 65609540 65609602 -137475930 - L2 LINE L2 -1 3312 3251 313 271 45 58 chr5 65609769 65609924 -137475608 + L2 LINE L2 3161 3313 0 181 0 69 0 chr5 65611746 65611775 -137473757 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 442 289 44 13 chr5 65612135 65612294 -137473238 + L3 LINE CR1 958 1121 -456 477 309 116 45 chr5 65612373 65612576 -137472956 + L2 LINE L2 2839 3026 -287 306 0 0 0 chr5 65612576 65612610 -137472922 + (CA)n Simple_repeat Simple_repeat 1 34 0 477 309 116 45 chr5 65612610 65612846 -137472686 + L2 LINE L2 3026 3309 -4 533 314 141 6 chr5 65612862 65613209 -137472323 + L3 LINE CR1 1122 1515 -62 362 265 64 68 chr5 65613420 65613639 -137471893 + MLT1J LTR MaLR 99 316 -195 304 103 88 44 chr5 65613699 65613767 -137471765 + MLT1L LTR MaLR 545 615 0 360 314 63 95 chr5 65613851 65614528 -137471004 - L2 LINE L2 -4 3268 2623 36 0 0 0 chr5 65615397 65615433 -137470099 + AT_rich Low_complexity Low_complexity 1 36 0 190 245 0 38 chr5 65616228 65616281 -137469251 - MIR SINE MIR -60 148 98 563 257 120 25 chr5 65616553 65616837 -137468695 - L1ME4a LINE L1 -11 6110 5800 387 269 6 72 chr5 65616901 65616981 -137468551 + L2 LINE L2 2899 2964 -308 2023 201 94 69 chr5 65616981 65617619 -137467913 + MLT1E1 LTR MaLR 1 654 0 387 269 6 72 chr5 65617619 65617705 -137467827 + L2 LINE L2 2964 3054 -218 186 171 0 0 chr5 65617811 65617846 -137467686 - MIR SINE MIR -71 137 103 456 360 16 16 chr5 65618717 65618906 -137466626 - MER5A DNA MER1_type 0 189 1 400 296 112 10 chr5 65619057 65619253 -137466279 - MER102b DNA MER1_type -20 321 106 259 206 109 33 chr5 65620822 65620914 -137464618 + L1ME LINE L1 5805 5903 -218 305 172 0 0 chr5 65620996 65621057 -137464475 + L1M3 LINE L1 5414 5474 -697 289 278 31 21 chr5 65622716 65622813 -137462719 + MIR SINE MIR 128 225 -37 296 248 78 100 chr5 65622858 65623109 -137462423 - L2 LINE L2 -309 2963 2719 1841 255 58 6 chr5 65623271 65623769 -137461763 + MLT1F LTR MaLR 17 540 -2 2281 247 86 12 chr5 65623805 65624396 -137461136 + MLT1E1 LTR MaLR 20 654 0 311 326 101 0 chr5 65624396 65624525 -137461007 + MLT1F-int LTR MaLR 1228 1369 -2 2199 215 24 37 chr5 65624535 65625079 -137460453 + MLT1F LTR MaLR 3 539 -3 319 250 120 0 chr5 65625726 65625834 -137459698 - L1ME4a LINE L1 -2 6119 5999 511 263 158 29 chr5 65626209 65626619 -137458913 - L1ME4a LINE L1 -281 5840 5378 262 313 95 47 chr5 65627223 65627434 -137458098 - MIR SINE MIR -30 232 12 * 449 231 150 0 chr5 65627372 65627522 -137458010 - MER5A DNA MER1_type -10 179 4 202 296 28 14 chr5 65628452 65628523 -137457009 - MIR3 SINE MIR -7 201 130 587 180 6 33 chr5 65630170 65630353 -137455179 + GA-rich Low_complexity Low_complexity 3 180 0 186 150 0 0 chr5 65630374 65630414 -137455118 + (CAGG)n Simple_repeat Simple_repeat 2 41 0 2172 97 0 55 chr5 65633186 65633516 -137452016 - AluSx SINE Alu 0 312 1 30 0 0 0 chr5 65634615 65634645 -137450887 + AT_rich Low_complexity Low_complexity 1 30 0 487 230 141 0 chr5 65634845 65634980 -137450552 + MIR SINE MIR 31 184 -78 484 299 21 7 chr5 65635000 65635144 -137450388 + MIR SINE MIR 1 146 -116 275 266 191 27 chr5 65638079 65638267 -137447265 - MIR SINE MIR -6 256 38 977 178 6 6 chr5 65638849 65639023 -137446509 + FRAM SINE Alu 2 175 -1 574 333 70 17 chr5 65639691 65640208 -137445324 + L1MC4a LINE L1 5383 5926 -1882 1246 188 202 38 chr5 65640457 65640877 -137444655 - Charlie1b DNA MER1_type -1 522 34 410 378 31 44 chr5 65641356 65641910 -137443622 - L2 LINE L2 -1 3271 2729 1120 199 79 31 chr5 65643355 65643885 -137441647 + MLT1E1 LTR MaLR 1 654 0 242 309 30 87 chr5 65644074 65644304 -137441228 + L2 LINE L2 2359 2575 -739 297 118 0 0 chr5 65644608 65644659 -137440873 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 62 83 0 chr5 65644793 65644841 -137440691 - L1MB4 LINE L1 -1 6179 6128 228 232 18 0 chr5 65645875 65645931 -137439601 + MER116 DNA Mariner 1 57 -23 1361 193 60 32 chr5 65646264 65646549 -137438983 + AluJo SINE Alu 1 293 -19 2395 84 0 7 chr5 65647515 65647823 -137437709 + AluSc SINE Alu 1 306 -3 2524 87 3 3 chr5 65648103 65648449 -137437083 + L1PA12 LINE L1 5808 6153 -15 276 100 0 0 chr5 65648626 65648666 -137436866 + (ATG)n Simple_repeat Simple_repeat 3 42 0 214 309 54 65 chr5 65648877 65649045 -137436487 + L2 LINE L2 2580 2745 -569 625 124 0 0 chr5 65649727 65649832 -137435700 + L1PA8 LINE L1 6068 6172 0 1476 142 50 56 chr5 65649862 65650164 -137435368 + AluJb SINE Alu 2 301 -11 803 161 0 23 chr5 65650807 65650937 -137434595 - FLAM_C SINE Alu -16 127 1 226 313 87 80 chr5 65651081 65651212 -137434320 + L2 LINE L2 2560 2689 -625 2608 45 0 7 chr5 65651212 65651520 -137434012 - AluY SINE Alu -5 306 1 226 313 87 80 chr5 65651520 65651676 -137433856 + L2 LINE L2 2689 2849 -465 2246 104 0 3 chr5 65652061 65652359 -137433173 - AluSg SINE Alu -13 297 1 1741 155 3 26 chr5 65652427 65652730 -137432802 - AluJo SINE Alu -16 296 1 25 31 0 0 chr5 65653574 65653606 -137431926 + AT_rich Low_complexity Low_complexity 1 32 0 312 408 16 68 chr5 65654022 65654331 -137431201 - L2 LINE L2 -75 3197 2905 1912 155 0 29 chr5 65655083 65655399 -137430133 - AluSx SINE Alu -5 307 1 194 181 0 28 chr5 65656499 65656571 -137428961 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 289 217 0 28 chr5 65656578 65656684 -137428848 + (CATATA)n Simple_repeat Simple_repeat 4 106 0 455 310 83 59 chr5 65656833 65657304 -137428228 - L1ME LINE L1 -330 5791 5310 334 359 78 12 chr5 65657397 65657653 -137427879 - L1ME LINE L1 -1237 4909 4637 1734 127 30 4 chr5 65658595 65658862 -137426670 + AluSg SINE Alu 35 308 -2 309 26 0 0 chr5 65660046 65660084 -137425448 + (TG)n Simple_repeat Simple_repeat 2 39 0 251 277 75 69 chr5 65660292 65660451 -137425081 + MIR3 SINE MIR 43 202 -6 24 67 0 0 chr5 65661198 65661243 -137424289 + AT_rich Low_complexity Low_complexity 1 45 0 2179 112 3 10 chr5 65661272 65661576 -137423956 + AluSx SINE Alu 2 303 -9 987 173 0 6 chr5 65661654 65661822 -137423710 + FRAM SINE Alu 1 161 -15 22 0 0 0 chr5 65662232 65662254 -137423278 + AT_rich Low_complexity Low_complexity 1 22 0 309 51 0 0 chr5 65662576 65662615 -137422917 + (CA)n Simple_repeat Simple_repeat 1 39 0 401 282 9 18 chr5 65663003 65663113 -137422419 + MIR SINE MIR 37 145 -63 252 0 0 0 chr5 65664106 65664134 -137421398 + (CA)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr5 65665223 65665260 -137420272 + (CA)n Simple_repeat Simple_repeat 1 37 0 258 95 0 0 chr5 65665680 65665722 -137419810 + (CGG)n Simple_repeat Simple_repeat 2 43 0 211 263 32 32 chr5 65665726 65665821 -137419711 + G-rich Low_complexity Low_complexity 6 100 0 210 150 0 0 chr5 65666007 65666047 -137419485 + (CTG)n Simple_repeat Simple_repeat 3 42 0 421 299 164 10 chr5 65668396 65668597 -137416935 + MIR SINE MIR 31 262 0 217 207 25 157 chr5 65668638 65668719 -137416813 + MER5B DNA MER1_type 1 65 -113 286 275 221 8 chr5 65668719 65668850 -137416682 - MER5A DNA MER1_type 0 189 31 358 247 14 0 chr5 65668875 65668960 -137416572 + MER5B DNA MER1_type 75 167 -22 1633 80 0 9 chr5 65669769 65669995 -137415537 - L1PA6 LINE L1 0 6154 5931 242 277 110 39 chr5 65670592 65670747 -137414785 - L2 LINE L2 -22 3291 3126 210 335 31 47 chr5 65671157 65671348 -137414184 - L2 LINE L2 -1635 1679 1492 393 220 133 27 chr5 65671622 65671772 -137413760 - L2 LINE L2 0 3313 3148 236 240 0 27 chr5 65671773 65671848 -137413684 + (TA)n Simple_repeat Simple_repeat 1 73 0 529 288 173 20 chr5 65671886 65672217 -137413315 - L2 LINE L2 -150 3163 2772 2032 147 3 0 chr5 65672280 65672573 -137412959 + AluSx SINE Alu 1 294 -18 270 136 0 0 chr5 65672584 65672628 -137412904 + (CA)n Simple_repeat Simple_repeat 2 45 0 594 279 133 39 chr5 65672635 65673050 -137412482 + HsTC2 DNA Tc2 232 685 -1213 23 0 0 0 chr5 65673060 65673083 -137412449 + AT_rich Low_complexity Low_complexity 1 23 0 362 342 33 0 chr5 65673416 65673536 -137411996 - MIR SINE MIR -119 143 20 877 278 128 8 chr5 65673762 65674250 -137411282 + L1ME3 LINE L1 5126 5747 -415 486 0 0 0 chr5 65674250 65674304 -137411228 + (CA)n Simple_repeat Simple_repeat 2 55 0 877 278 128 8 chr5 65674304 65674538 -137410994 + L1ME3 LINE L1 5747 5952 -210 453 269 181 0 chr5 65674594 65674743 -137410789 - MER5A DNA MER1_type -1 188 13 470 122 0 24 chr5 65675831 65675913 -137409619 - MADE1 DNA Mariner 0 80 1 525 261 85 70 chr5 65675918 65676146 -137409386 - MIR SINE MIR -2 260 4 343 341 15 15 chr5 65676271 65676406 -137409126 + MIR SINE MIR 79 213 -49 22 56 0 0 chr5 65677126 65677162 -137408370 + AT_rich Low_complexity Low_complexity 1 36 0 700 306 56 9 chr5 65677817 65678033 -137407499 + MIR SINE MIR 7 232 -30 302 311 37 30 chr5 65678351 65678486 -137407046 - MIR SINE MIR -6 256 121 926 231 23 27 chr5 65678749 65678970 -137406562 + MER58A DNA MER1_type 4 223 -1 2686 144 92 0 chr5 65678993 65679472 -137406060 + L1PA14 LINE L1 5387 5909 -265 916 85 0 7 chr5 65679470 65679611 -137405921 - L1P4 LINE L1 -635 5526 5387 * 1459 132 0 39 chr5 65679674 65679932 -137405600 + L1PA14 LINE L1 5911 6158 -3 411 296 84 34 chr5 65681576 65681722 -137403810 + MER5A DNA MER1_type 2 160 -29 1658 159 42 14 chr5 65681722 65682011 -137403521 - AluJb SINE Alu -15 297 1 411 296 84 34 chr5 65682011 65682043 -137403489 + MER5A DNA MER1_type 160 189 0 188 301 32 21 chr5 65682130 65682223 -137403309 + L2 LINE L2 2726 2819 -495 3715 144 15 66 chr5 65683251 65683979 -137401553 + LTR8 LTR ERV1 1 691 0 23 54 0 0 chr5 65684244 65684281 -137401251 + AT_rich Low_complexity Low_complexity 1 37 0 262 220 51 0 chr5 65684532 65684591 -137400941 + L2 LINE L2 3248 3309 -4 758 311 70 27 chr5 65685017 65685429 -137400103 - L2 LINE L2 0 3313 2884 27 29 0 0 chr5 65686079 65686113 -137399419 + AT_rich Low_complexity Low_complexity 1 34 0 1111 271 195 26 chr5 65686444 65686859 -137398673 - L2 LINE L2 0 3313 2969 465 66 0 0 chr5 65686859 65686920 -137398612 + (TG)n Simple_repeat Simple_repeat 2 62 0 1111 271 195 26 chr5 65686920 65687193 -137398339 - L2 LINE L2 -344 2969 2743 465 19 0 0 chr5 65687193 65687247 -137398285 + (TG)n Simple_repeat Simple_repeat 2 55 0 1111 271 195 26 chr5 65687247 65687422 -137398110 - L2 LINE L2 -570 2743 2306 2011 131 0 51 chr5 65689116 65689430 -137396102 - AluSx SINE Alu -14 298 1 219 404 9 9 chr5 65689805 65689919 -137395613 + MIR SINE MIR 20 133 -75 23 68 0 0 chr5 65690178 65690222 -137395310 + AT_rich Low_complexity Low_complexity 1 44 0 25 51 0 0 chr5 65690408 65690447 -137395085 + AT_rich Low_complexity Low_complexity 1 39 0 1680 261 46 53 chr5 65690716 65691279 -137394253 + MLT1E LTR MaLR 1 559 -34 245 259 0 0 chr5 65692037 65692091 -137393441 + L2 LINE L2 3246 3299 -14 28 29 0 0 chr5 65692348 65692383 -137393149 + AT_rich Low_complexity Low_complexity 1 35 0 913 261 90 0 chr5 65692901 65693029 -137392503 + MIR SINE MIR 5 120 -142 2388 56 3 19 chr5 65693029 65693348 -137392184 + L1PA5 LINE L1 5835 6148 -6 913 261 90 0 chr5 65693348 65693453 -137392079 + MIR SINE MIR 120 259 -3 25 0 0 0 chr5 65693518 65693543 -137391989 + AT_rich Low_complexity Low_complexity 1 25 0 408 309 104 35 chr5 65693871 65694072 -137391460 + L3 LINE CR1 491 705 -872 20702 161 31 11 chr5 65694104 65697220 -137388312 + L1M1 LINE L1 15 3266 -4299 2428 81 0 0 chr5 65697220 65697515 -137388017 + AluY SINE Alu 1 295 -16 20702 161 31 11 chr5 65697515 65699349 -137386183 + L1M1 LINE L1 3266 5062 -2503 1903 124 0 0 chr5 65700662 65700929 -137384603 + AluSx SINE Alu 41 307 -5 272 165 52 10 chr5 65701150 65701247 -137384285 + (TA)n Simple_repeat Simple_repeat 1 101 0 191 36 36 0 chr5 65701399 65701427 -137384105 + (TG)n Simple_repeat Simple_repeat 2 30 0 1289 33 0 7 chr5 65702360 65702513 -137383019 + AluY SINE Alu 154 305 -6 1119 222 72 61 chr5 65702515 65702965 -137382567 + MLT1C LTR MaLR 16 467 0 2114 137 139 24 chr5 65703692 65704018 -137381514 - MSTC LTR MaLR -3 425 47 2445 83 0 10 chr5 65704018 65704330 -137381202 - AluY SINE Alu -2 309 1 2114 137 139 24 chr5 65704330 65704384 -137381148 - MSTC LTR MaLR -381 47 1 460 222 49 118 chr5 65704689 65704892 -137380640 - MIR SINE MIR -6 256 68 376 310 94 21 chr5 65705831 65706023 -137379509 - MIR SINE MIR -20 242 34 180 0 0 0 chr5 65706098 65706118 -137379414 + (TA)n Simple_repeat Simple_repeat 2 21 0 1791 130 65 0 chr5 65706303 65706565 -137378967 - AluSx SINE Alu -5 307 29 327 226 0 0 chr5 65708017 65708079 -137377453 + MER5A DNA MER1_type 9 70 -119 2684 34 0 0 chr5 65708081 65708409 -137377123 - L1PA4 LINE L1 -299 5856 5529 2425 44 0 0 chr5 65708409 65708699 -137376833 + L1PA4 LINE L1 5858 6153 -2 200 246 82 0 chr5 65708737 65708798 -137376734 + MER5A DNA MER1_type 124 189 0 189 214 54 18 chr5 65708911 65708967 -137376565 + MIR SINE MIR 32 89 -119 559 279 77 29 chr5 65709339 65709547 -137375985 - MIR SINE MIR -3 259 42 577 277 67 36 chr5 65709650 65709718 -137375814 - MIR SINE MIR -59 203 139 1169 181 89 78 chr5 65709718 65710088 -137375444 - MLT1A2 LTR MaLR 0 374 1 577 277 67 36 chr5 65710088 65710214 -137375318 - MIR SINE MIR -123 139 3 513 350 45 24 chr5 65711201 65711538 -137373994 + MLT1I LTR MaLR 16 359 -50 765 300 65 61 chr5 65711655 65712175 -137373357 - L2 LINE L2 0 3313 2733 637 344 81 22 chr5 65712611 65713068 -137372464 - L2 LINE L2 -593 2721 2238 2734 284 98 43 chr5 65713678 65715087 -137370445 - L1M4b LINE L1 -5374 1485 11 398 333 41 53 chr5 65715346 65715625 -137369907 - L2 LINE L2 -1294 2020 1746 650 190 130 45 chr5 65715625 65715825 -137369707 + MER20 DNA MER1_type 2 218 -1 398 333 41 53 chr5 65715825 65715959 -137369573 - L2 LINE L2 -1568 1746 1612 273 272 132 35 chr5 65715985 65716099 -137369433 - MIR SINE MIR -105 157 33 2299 84 3 0 chr5 65717148 65717456 -137368076 - AluY SINE Alu -1 310 2 284 314 29 0 chr5 65717556 65717661 -137367871 + CT-rich Low_complexity Low_complexity 4 111 0 2237 108 0 0 chr5 65720512 65720799 -137364733 + AluSg SINE Alu 1 287 -23 304 348 35 17 chr5 65721561 65721676 -137363856 + MIR3 SINE MIR 7 123 -85 322 235 76 4 chr5 65721691 65721823 -137363709 - MIR SINE MIR -4 258 65 207 273 0 0 chr5 65721866 65721910 -137363622 + (TG)n Simple_repeat Simple_repeat 1 44 0 2456 71 0 7 chr5 65721935 65722244 -137363288 + AluY SINE Alu 1 307 -4 29 60 0 0 chr5 65723157 65723207 -137362325 + AT_rich Low_complexity Low_complexity 1 50 0 227 237 0 17 chr5 65723319 65723378 -137362154 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 370 269 29 19 chr5 65723779 65723883 -137361649 - MIR SINE MIR -9 253 149 1968 158 27 21 chr5 65724740 65725113 -137360419 + THE1C LTR MaLR 1 375 0 1140 288 124 42 chr5 65725256 65725804 -137359728 + MLT1G1 LTR MaLR 3 595 0 2288 99 7 0 chr5 65726705 65727009 -137358523 - AluSq SINE Alu -7 306 1 187 243 54 54 chr5 65727580 65727654 -137357878 + MIR SINE MIR 183 256 -6 23 0 0 0 chr5 65727692 65727715 -137357817 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr5 65729985 65730011 -137355521 + AT_rich Low_complexity Low_complexity 1 26 0 6456 175 23 19 chr5 65731358 65733364 -137352168 + L1PA16 LINE L1 3870 5887 -279 198 0 0 0 chr5 65733364 65733386 -137352146 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 6456 175 23 19 chr5 65733386 65733668 -137351864 + L1PA16 LINE L1 5887 6166 0 893 207 0 94 chr5 65733771 65733874 -137351658 - L2 LINE L2 0 3313 3202 808 234 52 111 chr5 65733874 65734370 -137351162 + MLT1C LTR MaLR 1 467 0 893 207 0 94 chr5 65734370 65734532 -137351000 - L2 LINE L2 -111 3202 3073 565 255 0 21 chr5 65734576 65734721 -137350811 + MER69 DNA AcHobo 1 142 -1084 2583 204 99 52 chr5 65734749 65735727 -137349805 + MER69 DNA AcHobo 1480 2503 -23 21 0 0 0 chr5 65737056 65737077 -137348455 + AT_rich Low_complexity Low_complexity 1 21 0 508 295 16 16 chr5 65737370 65737563 -137347969 + L2 LINE L2 2509 2701 -613 1263 255 64 6 chr5 65737766 65738123 -137347409 + L2 LINE L2 1401 1778 -1536 345 285 16 16 chr5 65738265 65738388 -137347144 + L2 LINE L2 3190 3312 -1 510 232 6 2 chr5 65738541 65738722 -137346810 - MER58B DNA MER1_type 0 341 2 5238 132 40 27 chr5 65740065 65740762 -137344770 + L1PA16 LINE L1 5153 5865 -301 2435 88 3 0 chr5 65740762 65741070 -137344462 - AluSp SINE Alu -4 309 1 5238 132 40 27 chr5 65741070 65741375 -137344157 + L1PA16 LINE L1 5865 6165 -1 446 340 20 0 chr5 65741525 65741678 -137343854 + MIR SINE MIR 81 236 -26 2560 90 27 8 chr5 65742348 65742716 -137342816 + THE1C LTR MaLR 1 375 0 7712 18 1 0 chr5 65743000 65744169 -137341363 + L1PA3 LINE L1 4998 6167 0 237 163 0 0 chr5 65744171 65744220 -137341312 + GA-rich Low_complexity Low_complexity 2 50 0 230 236 114 87 chr5 65744617 65744871 -137340661 - LTR67 LTR ERVL -10 547 287 1536 271 53 13 chr5 65745293 65745765 -137339767 + MER110 LTR ERV1 1 491 0 247 224 15 45 chr5 65745904 65745971 -137339561 + L2 LINE L2 3244 3308 -5 26 30 0 0 chr5 65745975 65746008 -137339524 + AT_rich Low_complexity Low_complexity 1 33 0 28 79 0 0 chr5 65747143 65747206 -137338326 + AT_rich Low_complexity Low_complexity 1 63 0 572 378 118 14 chr5 65747561 65748486 -137337046 + L2 LINE L2 189 1209 -2105 182 200 67 17 chr5 65748578 65748638 -137336894 + L2 LINE L2 2902 2964 -308 332 342 19 31 chr5 65748763 65748924 -137336608 + L2 LINE L2 3114 3272 0 15557 128 15 12 chr5 65749034 65749063 -137336469 + Tigger1 DNA MER2_type 1 28 -2390 2077 169 76 0 chr5 65749063 65749459 -137336073 + MSTB LTR MaLR 1 426 0 15557 128 15 12 chr5 65749459 65750304 -137335228 + Tigger1 DNA MER2_type 28 869 -1549 326 174 0 0 chr5 65750304 65750373 -137335159 + L1PA16 LINE L1 6096 6164 -2 15557 128 15 12 chr5 65750373 65751908 -137333624 + Tigger1 DNA MER2_type 869 2418 0 39 60 0 0 chr5 65752090 65752157 -137333375 + AT_rich Low_complexity Low_complexity 1 67 0 198 0 0 0 chr5 65752208 65752230 -137333302 + (TG)n Simple_repeat Simple_repeat 2 23 0 1998 138 0 0 chr5 65753756 65754068 -137331464 + AluSx SINE Alu 1 312 0 413 252 107 50 chr5 65755762 65755921 -137329611 - MIR SINE MIR -82 180 13 1681 219 82 17 chr5 65756265 65756731 -137328801 + L1ME2 LINE L1 5488 5983 -181 2265 99 0 10 chr5 65757691 65758005 -137327527 - AluY SINE Alu 0 311 1 1402 209 0 4 chr5 65758283 65758522 -137327010 + MER8 DNA MER2_type 2 239 0 1501 182 7 14 chr5 65758643 65758918 -137326614 - AluJb SINE Alu -39 273 1 2490 212 36 25 chr5 65759167 65759723 -137325809 + MER68 LTR ERV1 1 562 0 263 143 0 18 chr5 65761625 65761681 -137323851 + (TA)n Simple_repeat Simple_repeat 1 55 0 1084 160 45 12 chr5 65761695 65761967 -137323565 - MER7A DNA MER2_type 0 336 1 316 264 144 36 chr5 65762398 65762565 -137322967 + MIR SINE MIR 41 225 -37 440 309 80 6 chr5 65762726 65762888 -137322644 + MIR SINE MIR 89 262 0 374 336 129 9 chr5 65763210 65763375 -137322157 - MIR SINE MIR 0 262 60 568 218 18 0 chr5 65763375 65763485 -137322047 - MER81 DNA DNA -2 112 1 374 336 129 9 chr5 65763485 65763551 -137321981 - MIR SINE MIR -202 60 3 235 392 0 0 chr5 65763794 65763896 -137321636 - MIR3 SINE MIR -3 205 104 197 412 0 0 chr5 65764369 65764471 -137321061 - MIR3 SINE MIR -3 205 104 211 375 21 0 chr5 65764684 65764780 -137320752 + MIR3 SINE MIR 104 201 -7 1828 156 31 28 chr5 65764981 65765360 -137320172 + MLT2A2 LTR ERVL 1 308 -145 1294 68 0 0 chr5 65765455 65765617 -137319915 + MLT2A2 LTR ERVL 292 453 0 511 328 45 11 chr5 65766239 65766416 -137319116 + MER5A DNA MER1_type 7 189 0 576 259 90 0 chr5 65766455 65766656 -137318876 + L1ME4a LINE L1 5676 5894 -227 22 0 0 0 chr5 65767173 65767195 -137318337 + AT_rich Low_complexity Low_complexity 1 22 0 314 239 57 23 chr5 65767445 65767533 -137317999 + L1MC4 LINE L1 6615 6705 -1337 276 264 14 0 chr5 65767569 65767641 -137317891 + MLT1J2 LTR MaLR 43 115 -335 446 302 38 19 chr5 65767782 65767941 -137317591 + MLT1J2 LTR MaLR 263 424 -26 285 364 85 23 chr5 65768021 65768150 -137317382 - L2 LINE L2 -15 3257 3121 2388 99 3 3 chr5 65768445 65768758 -137316774 - AluSq SINE Alu 0 313 1 269 236 14 28 chr5 65768960 65769032 -137316500 + L2 LINE L2 3201 3271 -1 291 242 97 85 chr5 65770956 65771121 -137314411 - MIR SINE MIR -62 200 34 373 349 45 31 chr5 65771345 65771697 -137313835 + L1M4 LINE L1 4116 4472 -1674 559 339 25 62 chr5 65772137 65772494 -137313038 + L1M3d LINE L1 462 805 -5498 2773 236 76 25 chr5 65772694 65773810 -137311722 + L1M3d LINE L1 777 1856 -4522 25 0 0 0 chr5 65773841 65773866 -137311666 + AT_rich Low_complexity Low_complexity 1 25 0 418 296 293 14 chr5 65774000 65774469 -137311063 + L1MA9 LINE L1 1847 2410 -5076 1622 265 49 46 chr5 65774475 65775395 -137310137 + L1MA9 LINE L1 2826 3747 -3818 * 7649 186 54 19 chr5 65775369 65776568 -137308964 + L1MA9 LINE L1 4872 6152 -1413 2379 101 0 0 chr5 65776568 65776875 -137308657 + AluSg1 SINE Alu 1 307 -2 7649 186 54 19 chr5 65776875 65777404 -137308128 + L1MA9 LINE L1 6152 6661 -904 1193 192 128 26 chr5 65777404 65777716 -137307816 + MER2 DNA MER2_type 2 345 0 5232 172 30 12 chr5 65777724 65778608 -137306924 + L1MA9 LINE L1 6676 7582 -149 240 111 0 0 chr5 65778608 65778644 -137306888 + (CA)n Simple_repeat Simple_repeat 1 36 0 5232 172 30 12 chr5 65778644 65778797 -137306735 + L1MA9 LINE L1 7582 7731 0 981 231 89 59 chr5 65778824 65779376 -137306156 + L1MC5 LINE L1 7301 7874 -87 418 97 83 14 chr5 65779376 65779448 -137306084 + MADE1 DNA Mariner 1 77 -3 981 231 89 59 chr5 65779448 65779488 -137306044 + L1MC5 LINE L1 7874 7911 -50 211 257 7 146 chr5 65780786 65780930 -137304602 - L3 LINE CR1 -9 1568 1445 529 212 9 9 chr5 65780937 65781050 -137304482 - L2 LINE L2 -10 3303 3191 192 319 55 11 chr5 65781093 65781184 -137304348 - L2 LINE L2 -3 3310 3216 265 321 120 33 chr5 65781189 65781373 -137304159 - L3 LINE CR1 -187 1390 1191 322 258 31 25 chr5 65781486 65781617 -137303915 - Charlie8 DNA MER1_type -2264 153 5 1040 364 95 29 chr5 65781621 65782516 -137303016 - L3 LINE CR1 -384 1193 240 556 208 115 47 chr5 65782527 65782719 -137302813 - L2 LINE L2 0 3313 3109 1845 199 22 5 chr5 65782730 65783097 -137302435 - MER95 LTR ERV -9 422 50 641 193 188 11 chr5 65783518 65783694 -137301838 + MER97c DNA MER1_type? 28 234 -856 1318 173 89 68 chr5 65783706 65784134 -137301398 + LTR48 LTR ERV1 1 453 -246 1999 132 84 0 chr5 65784134 65784490 -137301042 + LTR24C LTR ERV1 248 633 -2 235 161 0 107 chr5 65784545 65784601 -137300931 + Alu SINE Alu 121 170 -133 5823 108 48 2 chr5 65784729 65785766 -137299766 + L1P LINE L1 4237 5325 -829 19163 179 110 44 chr5 65787504 65792736 -137292796 - L1P3 LINE L1 -571 5583 1 2115 88 0 16 chr5 65792738 65793058 -137292474 + L1P LINE L1 1846 2160 -3986 7595 57 4 5 chr5 65793172 65794580 -137290952 + L1P LINE L1 352 1886 -4260 257 242 89 8 chr5 65794680 65794804 -137290728 - L1 LINE L1 -2984 3162 3029 4596 137 26 2 chr5 65795096 65796152 -137289380 - L1PA13 LINE L1 -12 6151 5004 421 277 84 0 chr5 65796417 65796536 -137288996 + MIR SINE MIR 94 222 -40 440 236 38 0 chr5 65797848 65797954 -137287578 + MER58B DNA MER1_type 229 338 -3 261 374 10 10 chr5 65800313 65800412 -137285120 - L2 LINE L2 -36 3236 3138 22 56 0 0 chr5 65800670 65800706 -137284826 + AT_rich Low_complexity Low_complexity 1 36 0 4613 38 28 0 chr5 65800805 65801383 -137284149 - L1P LINE L1 -902 5244 4651 771 53 35 0 chr5 65801382 65801496 -137284036 + L1P LINE L1 5167 5284 -862 * 6434 67 6 14 chr5 65801612 65802788 -137282744 + L1PA7 LINE L1 4984 6150 -4 27 0 0 0 chr5 65803301 65803328 -137282204 + AT_rich Low_complexity Low_complexity 1 27 0 623 221 144 14 chr5 65803709 65803907 -137281625 - MIR SINE MIR -40 222 6 23 0 0 0 chr5 65805379 65805402 -137280130 + AT_rich Low_complexity Low_complexity 1 23 0 300 27 0 0 chr5 65805573 65805610 -137279922 + (TG)n Simple_repeat Simple_repeat 2 38 0 347 155 0 0 chr5 65805632 65805690 -137279842 + L1MC2 LINE L1 6046 6103 -241 326 289 90 43 chr5 65806474 65806685 -137278847 + HAL1 LINE L1 790 1010 -1497 23232 30 3 1 chr5 65806819 65809649 -137275883 - L1P LINE L1 -1100 5046 2213 288 113 65 32 chr5 65810155 65810217 -137275315 - MER4A LTR ERV1 -600 64 1 278 210 32 0 chr5 65810218 65810280 -137275252 + L1PB4 LINE L1 6038 6101 -55 602 188 8 0 chr5 65810992 65811109 -137274423 - L1PB4 LINE L1 -2 6154 6037 668 111 0 10 chr5 65811110 65811209 -137274323 + MER4A LTR ERV1 1 98 -566 1431 157 19 73 chr5 65811209 65811574 -137273958 + MER4A LTR ERV1 261 664 0 1805 32 71 0 chr5 65812058 65812341 -137273191 + AluYb8 SINE Alu 4 306 -12 263 260 87 58 chr5 65812992 65813200 -137272332 + HAL1 LINE L1 790 1003 -1504 1194 178 141 80 chr5 65813432 65813858 -137271674 + LTR47A LTR ERVL 1 452 0 9596 113 8 11 chr5 65813886 65816123 -137269409 + L1PA8 LINE L1 3897 6153 -19 3771 94 11 11 chr5 65815561 65816123 -137269409 + L1PA8 LINE L1 5592 6275 0 941 25 25 0 chr5 65816123 65816245 -137269287 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 532 199 41 48 chr5 65816466 65816612 -137268920 + LTR8 LTR ERV1 1 145 -546 247 24 24 24 chr5 65817468 65817509 -137268023 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr5 65817533 65817561 -137267971 + AT_rich Low_complexity Low_complexity 1 28 0 6974 40 3 0 chr5 65817651 65818536 -137266996 - L1PA3 LINE L1 -5 6150 5263 330 26 0 0 chr5 65818799 65818838 -137266694 + (CAT)n Simple_repeat Simple_repeat 2 40 0 4078 163 12 26 chr5 65819761 65820581 -137264951 - L1MB1 LINE L1 -5 6163 5355 1187 138 63 48 chr5 65820681 65820950 -137264582 - L1PA13 LINE L1 -1196 5601 5329 11645 218 17 21 chr5 65820970 65824132 -137261400 - L1PA13 LINE L1 -1980 4817 1663 2297 92 0 0 chr5 65824132 65824425 -137261107 - AluY SINE Alu -18 293 1 11645 218 17 21 chr5 65824425 65826082 -137259450 - L1PA13 LINE L1 -5134 1663 1 534 203 0 8 chr5 65826257 65826385 -137259147 - L1 LINE L1 -3098 3048 2922 10399 131 9 3 chr5 65826386 65828810 -137256722 - L1PA8A LINE L1 0 6131 3703 395 312 41 41 chr5 65830254 65830311 -137255221 + MLT1H1 LTR MaLR 185 241 -314 1759 74 13 4 chr5 65830311 65830542 -137254990 + AluSc SINE Alu 70 302 -7 395 312 41 41 chr5 65830542 65830753 -137254779 + MLT1H1 LTR MaLR 240 453 -102 406 321 60 23 chr5 65831755 65831973 -137253559 + MLT1H LTR MaLR 75 300 -249 1438 200 57 33 chr5 65831975 65832310 -137253222 + MLT2D LTR ERVL 1 343 -71 885 82 0 0 chr5 65832310 65832420 -137253112 - AluY SINE Alu -11 300 191 318 26 0 0 chr5 65832449 65832488 -137253044 + (TG)n Simple_repeat Simple_repeat 2 40 0 6708 138 54 5 chr5 65832515 65833704 -137251828 - Tigger1 DNA MER2_type 0 2418 1172 5804 83 8 1 chr5 65833709 65834536 -137250996 - L1PA10 LINE L1 -5 6163 5331 2288 147 35 10 chr5 65834532 65835014 -137250518 + L1P LINE L1 1764 2257 -3889 * 618 91 0 10 chr5 65835127 65835226 -137250306 - L1P LINE L1 -733 5428 5331 * 6533 146 13 4 chr5 65835222 65836387 -137249145 + L1P LINE L1 1764 2938 -3208 5737 142 32 56 chr5 65836390 65837595 -137247937 - Tigger1 DNA MER2_type -1241 1177 2 258 105 0 0 chr5 65837661 65837699 -137247833 + MLT2D LTR ERVL 367 404 -10 282 95 0 0 chr5 65837777 65837819 -137247713 + (CAGCC)n Simple_repeat Simple_repeat 5 46 0 24 0 0 0 chr5 65838743 65838767 -137246765 + AT_rich Low_complexity Low_complexity 1 24 0 503 215 30 52 chr5 65838776 65838911 -137246621 - FLAM_C SINE Alu 0 133 2 556 250 165 27 chr5 65839925 65840149 -137245383 + MIR SINE MIR 7 261 -1 7548 28 5 0 chr5 65840370 65841676 -137243856 + L1PA3 LINE L1 4841 6155 0 28 29 0 0 chr5 65841676 65841711 -137243821 + AT_rich Low_complexity Low_complexity 1 35 0 11487 109 12 44 chr5 65843579 65845751 -137239781 + L1P3 LINE L1 3 2173 -4288 1001 194 60 10 chr5 65845763 65846158 -137239374 - L1MCa LINE L1 -4476 1950 1448 276 324 72 0 chr5 65846437 65846548 -137238984 - L2 LINE L2 0 3313 3195 24 0 0 0 chr5 65846638 65846662 -137238870 + AT_rich Low_complexity Low_complexity 1 24 0 401 188 0 0 chr5 65846888 65846968 -137238564 + AluJ/FRAM SINE Alu 223 302 -10 434 331 13 7 chr5 65847724 65847878 -137237654 + L2 LINE L2 2624 2778 -536 633 327 76 40 chr5 65847908 65848135 -137237397 + L2 LINE L2 2849 3066 -247 2410 154 20 14 chr5 65848135 65848577 -137236955 - L1PA16 LINE L1 -5 6161 5717 633 327 76 40 chr5 65848577 65848798 -137236734 + L2 LINE L2 3066 3313 0 331 154 0 15 chr5 65849297 65849362 -137236170 - MER4A LTR ERV1 -600 64 1 335 215 0 0 chr5 65849363 65849428 -137236104 + L1PB4 LINE L1 6037 6101 -55 237 358 158 0 chr5 65849473 65849638 -137235894 + L2 LINE L2 2565 2755 -559 496 172 25 41 chr5 65850131 65850253 -137235279 - L1PB4 LINE L1 0 6156 6037 554 104 21 10 chr5 65850254 65850350 -137235182 + MER4A LTR ERV1 2 98 -566 1089 158 39 72 chr5 65850350 65850707 -137234825 + MER4A LTR ERV1 261 664 0 2828 16 0 0 chr5 65851193 65851508 -137234024 + AluYb8 SINE Alu 1 315 -3 314 149 15 0 chr5 65851720 65851787 -137233745 + L1PA14 LINE L1 6091 6158 -3 366 292 6 18 chr5 65851854 65852025 -137233507 - L1M4 LINE L1 -1481 4665 4497 257 125 0 21 chr5 65852764 65852812 -137232720 + (GA)n Simple_repeat Simple_repeat 2 48 0 384 248 111 13 chr5 65853597 65853750 -137231782 + MIR SINE MIR 92 259 -3 1863 204 114 30 chr5 65855226 65855692 -137229840 - MLT1D LTR MaLR 0 505 1 917 85 43 0 chr5 65855971 65856112 -137229420 + AluSq/x SINE Alu 1 147 -165 1135 152 0 54 chr5 65856228 65856543 -137228989 - L1P LINE L1 -3035 3111 2814 505 118 49 39 chr5 65856549 65856651 -137228881 - L1P LINE L1 -4286 1860 1758 1682 195 22 32 chr5 65856932 65857301 -137228231 + MLT1A1 LTR MaLR 1 365 0 438 277 19 19 chr5 65857413 65857572 -137227960 - MLT1I LTR MaLR -250 159 1 407 330 123 53 chr5 65857576 65858031 -137227501 + L2 LINE L2 2827 3313 0 189 94 0 0 chr5 65858423 65858455 -137227077 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 183 264 0 0 chr5 65859200 65859253 -137226279 + (TG)n Simple_repeat Simple_repeat 1 53 0 283 169 17 0 chr5 65860583 65860642 -137224890 + MLT1K LTR MaLR 526 585 -3 3008 236 51 59 chr5 65862079 65863893 -137221639 + L1MA4 LINE L1 2041 3812 -3753 8554 184 22 16 chr5 65863894 65865889 -137219643 + L1MA4 LINE L1 3951 5956 -1609 5179 148 36 10 chr5 65865888 65866579 -137218953 + L1MA4 LINE L1 6488 7225 -494 * 2703 29 3 0 chr5 65866579 65866889 -137218643 + AluY SINE Alu 1 311 0 5179 148 36 10 chr5 65866889 65867395 -137218137 + L1MA4 LINE L1 7225 7716 -3 28 29 0 0 chr5 65868516 65868551 -137216981 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr5 65868651 65868690 -137216842 + AT_rich Low_complexity Low_complexity 1 39 0 287 233 113 23 chr5 65868696 65868829 -137216703 + L1ME4a LINE L1 5974 6118 -3 278 265 69 59 chr5 65868895 65868997 -137216535 + MIR SINE MIR 25 127 -135 1363 205 104 86 chr5 65869237 65869681 -137215851 + MLT1C LTR MaLR 3 454 -13 22 70 0 0 chr5 65869824 65869867 -137215665 + AT_rich Low_complexity Low_complexity 1 43 0 6508 71 0 3 chr5 65869872 65871031 -137214501 - L1PA7 LINE L1 -11 6143 5028 1315 88 6 0 chr5 65871031 65871212 -137214320 + L1P LINE L1 4799 4980 -1166 23 54 0 0 chr5 65871218 65871255 -137214277 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr5 65872077 65872100 -137213432 + (TG)n Simple_repeat Simple_repeat 2 24 0 805 133 28 0 chr5 65872981 65873124 -137212408 + L1MA4 LINE L1 6019 6165 -135 * 2810 191 35 2 chr5 65873123 65873714 -137211818 - L1 LINE L1 -1518 5330 4720 1649 248 15 4 chr5 65873715 65874183 -137211349 - L1 LINE L1 -4192 2657 2185 1465 262 75 59 chr5 65874352 65875223 -137210309 + L1MC4a LINE L1 5283 6167 -1641 274 206 0 41 chr5 65875230 65875303 -137210229 + GA-rich Low_complexity Low_complexity 4 73 0 23 0 0 0 chr5 65876666 65876689 -137208843 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 65876896 65876919 -137208613 + AT_rich Low_complexity Low_complexity 1 23 0 186 118 0 0 chr5 65877022 65877056 -137208476 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 511 140 37 19 chr5 65877063 65877170 -137208362 - L1PA16 LINE L1 0 6166 6058 207 209 0 0 chr5 65877775 65877818 -137207714 + A-rich Low_complexity Low_complexity 1 43 0 43644 42 1 1 chr5 65878682 65884836 -137200696 + L1PA3 LINE L1 2 6155 0 6216 141 22 4 chr5 65884924 65886118 -137199414 + L1MA5 LINE L1 5083 6295 -5 26 0 0 0 chr5 65886431 65886457 -137199075 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 65887899 65887920 -137197612 + AT_rich Low_complexity Low_complexity 1 21 0 387 332 50 46 chr5 65888421 65888659 -137196873 + L2 LINE L2 1487 1725 -1589 249 232 0 0 chr5 65889642 65889711 -137195821 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 366 61 0 0 chr5 65889744 65889793 -137195739 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 387 341 67 14 chr5 65890286 65890512 -137195020 - MIR SINE MIR -3 259 18 24 0 0 0 chr5 65891901 65891925 -137193607 + AT_rich Low_complexity Low_complexity 1 24 0 397 333 74 35 chr5 65892557 65892619 -137192913 + L2 LINE L2 1703 1761 -1553 270 56 0 0 chr5 65892619 65892655 -137192877 + (CA)n Simple_repeat Simple_repeat 2 37 0 397 333 74 35 chr5 65892655 65892958 -137192574 + L2 LINE L2 1761 2082 -1232 315 0 0 0 chr5 65893373 65893408 -137192124 + (TG)n Simple_repeat Simple_repeat 2 36 0 315 314 5 96 chr5 65893555 65893743 -137191789 + MER5A DNA MER1_type 17 187 -2 762 258 77 10 chr5 65894331 65894525 -137191007 + MIR SINE MIR 31 237 -25 22 56 0 0 chr5 65894586 65894622 -137190910 + AT_rich Low_complexity Low_complexity 1 36 0 236 286 50 68 chr5 65894635 65894796 -137190736 - L2 LINE L2 -1021 2293 2136 3122 86 7 31 chr5 65895611 65896066 -137189466 + MLT2A1 LTR ERVL 1 444 0 2238 123 14 8 chr5 65896178 65896529 -137189003 - THE1A LTR MaLR 0 355 3 11438 97 7 1 chr5 65896531 65898102 -137187430 - THE1A-int LTR MaLR 0 1580 1 2317 124 6 8 chr5 65898102 65898458 -137187074 - THE1A LTR MaLR 0 355 1 2362 269 234 11 chr5 65899130 65900254 -137185278 + L2 LINE L2 1245 2619 -695 387 297 68 8 chr5 65900263 65900381 -137185151 + LTR16A1 LTR ERVL 1 125 -332 216 111 0 0 chr5 65900398 65900434 -137185098 + (GA)n Simple_repeat Simple_repeat 1 36 0 471 289 52 0 chr5 65900462 65900597 -137184935 + L2 LINE L2 3172 3313 0 237 304 25 25 chr5 65901600 65901679 -137183853 - L2 LINE L2 -12 3260 3182 1066 329 105 41 chr5 65901920 65902893 -137182639 - L2 LINE L2 -346 2968 1934 241 265 44 0 chr5 65903149 65903217 -137182315 + MLT1J2 LTR MaLR 5 75 -375 524 286 43 43 chr5 65903319 65903529 -137182003 + MLT1J2 LTR MaLR 241 450 0 243 333 16 0 chr5 65904351 65904414 -137181118 - MER45 DNA AcHobo -1517 64 1 2160 162 19 3 chr5 65904689 65905048 -137180484 + MLT1A1 LTR MaLR 1 365 0 262 206 55 0 chr5 65905745 65905818 -137179714 - HAL1 LINE L1 -354 2153 2077 1125 258 148 22 chr5 65906161 65906606 -137178926 + MLT1H LTR MaLR 40 540 -9 21 36 0 0 chr5 65907470 65907498 -137178034 + AT_rich Low_complexity Low_complexity 1 28 0 932 83 0 0 chr5 65907561 65907681 -137177851 + AluSg/x SINE Alu 174 293 -17 466 241 35 26 chr5 65907901 65908017 -137177515 + MIR3 SINE MIR 53 169 -39 22 0 0 0 chr5 65908129 65908151 -137177381 + AT_rich Low_complexity Low_complexity 1 22 0 957 127 0 0 chr5 65908151 65908285 -137177247 - AluSg/x SINE Alu -23 289 156 215 271 0 17 chr5 65908388 65908447 -137177085 + L2 LINE L2 3211 3268 -4 316 268 48 107 chr5 65908457 65908625 -137176907 - L3 LINE CR1 -81 1496 1339 1318 190 127 36 chr5 65908641 65909026 -137176506 + Charlie4a DNA MER1_type 2 350 -1611 1454 184 19 41 chr5 65909026 65909342 -137176190 + AluJo SINE Alu 1 309 -3 1793 187 42 3 chr5 65909350 65909681 -137175851 + MER2 DNA MER2_type 1 344 0 1318 190 127 36 chr5 65909681 65909702 -137175830 + Charlie4a DNA MER1_type 356 455 -53 1419 221 111 0 chr5 65909855 65910180 -137175352 + MLT1A1 LTR MaLR 5 365 0 353 239 68 26 chr5 65910623 65910740 -137174792 - MER103 DNA DNA -44 122 1 324 255 110 123 chr5 65910817 65911127 -137174405 - L3 LINE CR1 -494 1083 778 1828 137 7 7 chr5 65911127 65911397 -137174135 - AluSx SINE Alu -13 299 30 251 259 52 82 chr5 65911465 65911600 -137173932 + MLT1J LTR MaLR 3 133 -378 5947 93 11 4 chr5 65911605 65913066 -137172466 - L1PA11 LINE L1 -1 6173 4686 257 284 49 0 chr5 65913094 65913175 -137172357 - L3 LINE CR1 -886 691 607 27 0 0 0 chr5 65914575 65914602 -137170930 + AT_rich Low_complexity Low_complexity 1 27 0 234 36 0 0 chr5 65915062 65915090 -137170442 + MER103 DNA DNA 3 30 -136 187 337 158 0 chr5 65915152 65915247 -137170285 - MIR3 SINE MIR 0 208 99 247 175 16 16 chr5 65915321 65915384 -137170148 + GA-rich Low_complexity Low_complexity 2 64 0 416 192 10 0 chr5 65916996 65917095 -137168437 + GA-rich Low_complexity Low_complexity 2 101 0 356 264 73 9 chr5 65917118 65917228 -137168304 - MIR SINE MIR -48 214 98 27 62 0 0 chr5 65917771 65917819 -137167713 + AT_rich Low_complexity Low_complexity 1 48 0 506 251 34 50 chr5 65918300 65918415 -137167117 - MER5B DNA MER1_type 0 178 66 510 17 0 0 chr5 65918415 65918474 -137167058 + (TG)n Simple_repeat Simple_repeat 2 60 0 506 251 34 50 chr5 65918474 65918537 -137166995 - MER5B DNA MER1_type -112 66 3 209 316 83 48 chr5 65919512 65919680 -137165852 + L2 LINE L2 3098 3271 -1 1984 132 3 3 chr5 65920745 65921049 -137164483 + AluSx SINE Alu 3 306 -6 184 321 0 54 chr5 65921061 65921117 -137164415 + L2 LINE L2 3203 3255 -17 1603 135 83 29 chr5 65921409 65921855 -137163677 + L1M2 LINE L1 5114 5569 -722 1760 236 58 50 chr5 65922351 65922889 -137162643 - MLT1F LTR MaLR 0 542 1 900 230 147 45 chr5 65923069 65923382 -137162150 - MER2 DNA MER2_type 0 345 1 1627 216 96 14 chr5 65923970 65924336 -137161196 - MSTD LTR MaLR 0 396 1 245 138 0 50 chr5 65924573 65924653 -137160879 + (TA)n Simple_repeat Simple_repeat 1 76 0 422 95 32 84 chr5 65924669 65924859 -137160673 + (TA)n Simple_repeat Simple_repeat 1 180 0 213 253 97 84 chr5 65925058 65925212 -137160320 + MIR SINE MIR 48 203 -59 429 159 0 0 chr5 65926058 65926121 -137159411 - AluS SINE Alu -247 63 1 6053 181 39 27 chr5 65926123 65927183 -137158349 - L1 LINE L1 -1535 4611 3529 2462 82 0 0 chr5 65927183 65927488 -137158044 + AluY SINE Alu 1 305 -6 6053 181 39 27 chr5 65927488 65927778 -137157754 - L1 LINE L1 -2617 3529 3244 4774 175 22 1 chr5 65927771 65928844 -137156688 + L1MB1 LINE L1 5072 6168 0 * 2068 123 3 0 chr5 65929092 65929385 -137156147 - AluSg SINE Alu -16 294 1 3034 220 42 40 chr5 65929388 65930301 -137155231 - L1ME3A LINE L1 -3 6167 5254 297 221 0 59 chr5 65930390 65930458 -137155074 - L2 LINE L2 -4 3309 3246 21 0 0 0 chr5 65930478 65930499 -137155033 + AT_rich Low_complexity Low_complexity 1 21 0 564 262 165 26 chr5 65931416 65931919 -137153613 - L1ME4a LINE L1 -1 6120 5548 777 263 109 15 chr5 65932107 65932381 -137153151 - L2 LINE L2 0 3313 3014 315 219 9 26 chr5 65932660 65932774 -137152758 + CT-rich Low_complexity Low_complexity 1 112 0 393 228 53 35 chr5 65932832 65932930 -137152602 + MIR SINE MIR 137 239 -23 6519 136 34 52 chr5 65932930 65933366 -137152166 - Tigger3b DNA MER2_type -1797 1231 789 2355 67 0 22 chr5 65933366 65933680 -137151852 - AluY SINE Alu -4 307 1 6519 136 34 52 chr5 65933680 65934497 -137151035 - Tigger3b DNA MER2_type -2239 789 1 393 228 53 35 chr5 65934497 65934512 -137151020 + MIR SINE MIR 239 252 -10 2385 128 57 31 chr5 65934747 65935169 -137150363 + Tigger2a DNA MER2_type 1 433 -1 373 349 0 24 chr5 65936628 65936754 -137148778 - MIR3 SINE MIR -21 187 65 570 300 6 28 chr5 65937385 65937565 -137147967 + MER5A DNA MER1_type 14 189 0 24 0 0 0 chr5 65938939 65938963 -137146569 + AT_rich Low_complexity Low_complexity 1 24 0 21 82 0 0 chr5 65939008 65939057 -137146475 + AT_rich Low_complexity Low_complexity 1 49 0 1875 179 45 36 chr5 65939566 65940072 -137145460 - L1MA8 LINE L1 0 7710 7112 * 2161 175 12 12 chr5 65940071 65940483 -137145049 - L1MA8 LINE L1 -1246 6319 5908 41 36 0 0 chr5 65940502 65940557 -137144975 + AT_rich Low_complexity Low_complexity 1 55 0 1051 232 57 18 chr5 65940560 65940903 -137144629 - L1MA8 LINE L1 -3867 3698 3343 1440 78 0 0 chr5 65940904 65941104 -137144428 - AluY SINE Alu 0 301 102 3867 254 40 49 chr5 65941120 65942073 -137143459 - L1MA8 LINE L1 -4174 3391 2454 2188 27 8 4 chr5 65942073 65942336 -137143196 - AluY SINE Alu -4 307 44 3867 254 40 49 chr5 65942336 65942897 -137142635 - L1MA8 LINE L1 -5111 2454 1890 1603 167 92 9 chr5 65943350 65943667 -137141865 + MER2 DNA MER2_type 2 344 0 365 252 49 41 chr5 65945003 65945126 -137140406 - MIR SINE MIR -39 223 100 186 325 13 39 chr5 65945288 65945365 -137140167 + MIR SINE MIR 123 197 -65 243 209 127 177 chr5 65946802 65946913 -137138619 + MIR SINE MIR 108 210 -52 245 0 89 0 chr5 65946913 65946958 -137138574 + (TA)n Simple_repeat Simple_repeat 1 49 0 243 209 127 177 chr5 65946958 65947004 -137138528 + MIR SINE MIR 210 257 -5 315 0 0 0 chr5 65947077 65947112 -137138420 + (CA)n Simple_repeat Simple_repeat 2 36 0 288 301 150 0 chr5 65947991 65948124 -137137408 + MIR SINE MIR 12 164 -98 271 322 82 65 chr5 65948601 65949138 -137136394 - L2 LINE L2 -702 2612 2067 2495 260 55 25 chr5 65949483 65950650 -137134882 - L1MCb LINE L1 -4792 2149 938 630 320 59 13 chr5 65950861 65951251 -137134281 - L1MCb LINE L1 -5986 437 30 21 0 0 0 chr5 65952240 65952261 -137133271 + AT_rich Low_complexity Low_complexity 1 21 0 303 333 68 30 chr5 65952528 65952660 -137132872 - MIR3 SINE MIR -11 197 61 225 416 31 6 chr5 65952903 65953064 -137132468 - L3b LINE CR1 -111 1472 1308 22 56 0 0 chr5 65955353 65955389 -137130143 + AT_rich Low_complexity Low_complexity 1 36 0 255 302 198 0 chr5 65955401 65955487 -137130045 + L2 LINE L2 3161 3263 -9 23 54 0 0 chr5 65956707 65956744 -137128788 + AT_rich Low_complexity Low_complexity 1 37 0 1226 116 6 0 chr5 65957242 65957414 -137128118 + AluSg/x SINE Alu 81 253 -59 2360 64 0 7 chr5 65957414 65957712 -137127820 + AluY SINE Alu 7 302 -9 1653 191 24 38 chr5 65957725 65958097 -137127435 + MLT1A2 LTR MaLR 4 370 -4 275 340 27 20 chr5 65958182 65958329 -137127203 - L3 LINE CR1 -1 1576 1429 413 341 97 14 chr5 65962584 65962801 -137122731 + MIR SINE MIR 7 241 -21 388 294 61 18 chr5 65962978 65963141 -137122391 - LTR33 LTR ERVL -2 519 350 444 249 58 46 chr5 65963262 65963435 -137122097 - LTR33 LTR ERVL -338 183 9 382 314 109 23 chr5 65963506 65963681 -137121851 - MIR SINE MIR -71 191 2 211 294 12 38 chr5 65964148 65964311 -137121221 + MIR SINE MIR 16 198 -64 267 256 39 0 chr5 65964578 65964656 -137120876 - L2 LINE L2 0 3313 3233 235 322 0 0 chr5 65965384 65965443 -137120089 - MIR SINE MIR -125 137 79 2086 136 24 32 chr5 65966077 65966453 -137119079 + THE1C LTR MaLR 1 373 -2 2018 121 3 14 chr5 65966528 65966817 -137118715 + AluSx SINE Alu 3 288 -24 786 309 112 6 chr5 65966971 65967621 -137117911 + L1ME4a LINE L1 5347 6086 -35 2592 35 6 6 chr5 65968200 65968511 -137117021 + AluY SINE Alu 1 311 0 330 307 138 31 chr5 65968788 65969244 -137116288 + L2 LINE L2 1612 2116 -1198 251 347 77 29 chr5 65969275 65969445 -137116087 - MER5A DNA MER1_type 0 189 12 188 248 87 122 chr5 65969739 65969993 -137115539 + L2 LINE L2 2816 3060 -212 490 291 25 55 chr5 65970383 65970582 -137114950 - L2 LINE L2 -4 3268 3076 962 32 0 8 chr5 65971822 65971945 -137113587 + (TAGA)n Simple_repeat Simple_repeat 2 123 0 335 338 22 40 chr5 65973233 65973461 -137112071 + MIR SINE MIR 39 262 0 725 302 10 0 chr5 65974914 65975116 -137110416 - MIR SINE MIR -1 261 58 309 336 8 23 chr5 65975604 65975735 -137109797 + L1ME4a LINE L1 3810 3938 -2208 227 319 99 46 chr5 65975792 65976115 -137109417 + L1P LINE L1 4021 4360 -1786 425 340 86 28 chr5 65976589 65976880 -137108652 + L1ME4a LINE L1 4751 5058 -1088 1502 182 45 14 chr5 65976991 65977277 -137108255 - AluJb SINE Alu -17 295 1 345 299 181 45 chr5 65977388 65977794 -137107738 + L1ME4a LINE L1 5268 5618 -503 2222 98 7 0 chr5 65977794 65978081 -137107451 - AluSq SINE Alu -24 289 1 345 299 181 45 chr5 65978081 65978404 -137107128 + L1ME4a LINE L1 5618 6096 -25 21 36 0 0 chr5 65978752 65978780 -137106752 + AT_rich Low_complexity Low_complexity 1 28 0 648 97 48 7 chr5 65978981 65979126 -137106406 + (TCTA)n Simple_repeat Simple_repeat 4 154 0 301 354 72 30 chr5 65979273 65979510 -137106022 - MIR SINE MIR -11 251 5 729 308 62 8 chr5 65979555 65979795 -137105737 + MIR SINE MIR 6 258 -4 1918 139 23 26 chr5 65980418 65980721 -137104811 + AluSx SINE Alu 5 306 -6 683 309 40 74 chr5 65982804 65983157 -137102375 - L2 LINE L2 -1 3312 2972 291 54 0 0 chr5 65983983 65984020 -137101512 + (T)n Simple_repeat Simple_repeat 1 37 0 270 231 19 9 chr5 65984484 65984592 -137100940 + GA-rich Low_complexity Low_complexity 2 110 0 307 273 50 30 chr5 65986271 65986370 -137099162 - L1MC4 LINE L1 -1329 6713 6613 34 55 0 0 chr5 65986384 65986439 -137099093 + AT_rich Low_complexity Low_complexity 1 55 0 1157 277 86 66 chr5 65987046 65987605 -137097927 + MLT1K LTR MaLR 18 587 -1 21 36 0 0 chr5 65988431 65988459 -137097073 + AT_rich Low_complexity Low_complexity 1 28 0 848 208 52 6 chr5 65990456 65990629 -137094903 + MER5A DNA MER1_type 7 187 -2 259 337 0 22 chr5 65991152 65991241 -137094291 + MLT1K LTR MaLR 3 89 -499 2057 212 35 16 chr5 65991255 65991831 -137093701 + L1ME3 LINE L1 2138 2724 -3422 1906 182 36 3 chr5 65991856 65992241 -137093291 + L1MB3 LINE L1 5772 6169 -14 2157 260 100 26 chr5 65992327 65993322 -137092210 + L1ME3 LINE L1 5094 6158 -4 21 36 0 0 chr5 65993729 65993757 -137091775 + AT_rich Low_complexity Low_complexity 1 28 0 390 298 9 9 chr5 65994203 65994317 -137091215 - MIR3 SINE MIR -12 196 83 187 238 206 0 chr5 65994591 65994654 -137090878 + MER5C DNA MER1_type 1 76 -248 754 208 17 17 chr5 65995220 65995398 -137090134 - MER5B DNA MER1_type 0 178 1 352 282 168 38 chr5 65995647 65995963 -137089569 + L1ME4a LINE L1 5513 5869 -252 195 139 0 0 chr5 65995970 65996006 -137089526 + (CA)n Simple_repeat Simple_repeat 1 36 0 29 28 0 0 chr5 65996120 65996156 -137089376 + AT_rich Low_complexity Low_complexity 1 36 0 1453 208 136 21 chr5 65996297 65996768 -137088764 - L1ME2 LINE L1 0 6164 5640 1246 230 46 78 chr5 65996769 65997139 -137088393 + MLT1F LTR MaLR 1 358 -184 2142 130 3 13 chr5 66047638 66047945 -137037587 + AluSx SINE Alu 1 304 -8 999 284 135 19 chr5 66048520 66048935 -137036597 - L2 LINE L2 0 3313 2851 29 94 0 0 chr5 66049513 66049598 -137035934 + AT_rich Low_complexity Low_complexity 1 85 0 22 0 0 0 chr5 66050030 66050052 -137035480 + AT_rich Low_complexity Low_complexity 1 22 0 417 287 84 45 chr5 66050315 66050517 -137035015 + Charlie8 DNA MER1_type 67 276 -2141 189 195 0 0 chr5 66050615 66050656 -137034876 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 2256 123 0 0 chr5 66050824 66051125 -137034407 + AluSx SINE Alu 1 301 -11 541 280 57 42 chr5 66051653 66051846 -137033686 - MER91A DNA MER1_type 0 196 1 2267 100 3 10 chr5 66052229 66052529 -137033003 + AluSp SINE Alu 1 298 -15 240 149 0 0 chr5 66052956 66053003 -137032529 + (TCCTG)n Simple_repeat Simple_repeat 3 49 0 2269 121 132 8 chr5 66053662 66054041 -137031491 + MSTA LTR MaLR 1 426 -2 267 342 12 12 chr5 66054090 66054251 -137031281 + CT-rich Low_complexity Low_complexity 1 161 0 222 118 0 0 chr5 66055814 66055848 -137029684 + (TG)n Simple_repeat Simple_repeat 1 34 0 318 169 0 0 chr5 66055866 66055931 -137029601 + GA-rich Low_complexity Low_complexity 2 66 0 2038 248 115 22 chr5 66056587 66057298 -137028234 - L1ME3A LINE L1 -1 6169 5393 547 305 53 0 chr5 66057741 66057931 -137027601 + MIR SINE MIR 53 252 -10 386 314 137 16 chr5 66058187 66058442 -137027090 + Charlie8 DNA MER1_type 6 291 -2126 1625 207 106 38 chr5 66058663 66059136 -137026396 - MLT1D LTR MaLR 0 505 1 180 176 0 0 chr5 66059922 66059956 -137025576 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 295 221 168 0 chr5 66060289 66060384 -137025148 + L2 LINE L2 3162 3272 0 486 213 153 7 chr5 66060416 66060566 -137024966 - MIR SINE MIR -25 237 66 201 129 0 0 chr5 66060569 66060600 -137024932 - MIR SINE MIR -12 250 220 2295 90 0 0 chr5 66060819 66061097 -137024435 + AluSc SINE Alu 1 278 -31 603 198 9 0 chr5 66061170 66061281 -137024251 - MLT1D LTR MaLR 0 505 394 483 301 22 38 chr5 66061310 66061493 -137024039 - MIR SINE MIR -81 181 2 445 306 57 81 chr5 66061498 66062158 -137023374 + L2 LINE L2 2601 3242 -30 382 304 32 70 chr5 66062232 66062390 -137023142 + L2 LINE L2 3121 3272 0 252 136 0 0 chr5 66063624 66063632 -137021900 + (GAAA)n Simple_repeat Simple_repeat 2 9 -36 2271 109 0 3 chr5 66063632 66063943 -137021589 + AluSg SINE Alu 1 310 0 252 136 0 0 chr5 66063943 66063978 -137021554 + (GAAA)n Simple_repeat Simple_repeat 8 45 0 447 309 93 0 chr5 66064762 66064901 -137020631 - MER91A DNA MER1_type -1 195 44 872 270 65 27 chr5 66065457 66065750 -137019782 + MLT1I LTR MaLR 104 407 -2 2291 231 81 45 chr5 66066010 66066594 -137018938 + MER77 LTR ERV1 1 605 0 22 0 0 0 chr5 66067237 66067259 -137018273 + AT_rich Low_complexity Low_complexity 1 22 0 452 298 53 16 chr5 66068583 66068765 -137016767 - MIR3 SINE MIR -15 193 2 581 310 34 25 chr5 66068830 66069069 -137016463 - MIR SINE MIR -8 254 14 507 334 112 28 chr5 66069512 66070122 -137015410 + L2 LINE L2 1898 2558 -756 231 326 23 16 chr5 66070189 66070318 -137015214 - LTR16A1 LTR ERVL 0 457 328 282 335 48 91 chr5 66070677 66071116 -137014416 + L2 LINE L2 2807 3226 -46 22 20 5 0 chr5 66071128 66071184 -137014348 + AT_rich Low_complexity Low_complexity 1 29 0 4579 155 74 45 chr5 66072721 66073435 -137012097 - MER21A LTR ERV1 0 931 184 2195 69 73 14 chr5 66073435 66073723 -137011809 - L1PA8A LINE L1 -2 6129 5825 4579 155 74 45 chr5 66073723 66073913 -137011619 - MER21A LTR ERV1 -747 184 1 192 236 0 55 chr5 66073956 66074011 -137011521 - L2 LINE L2 -8 3305 3254 24 53 0 0 chr5 66074430 66074468 -137011064 + AT_rich Low_complexity Low_complexity 1 38 0 762 240 161 16 chr5 66074560 66074993 -137010539 - MLT1G1 LTR MaLR -23 572 1 23 0 0 0 chr5 66075695 66075718 -137009814 + AT_rich Low_complexity Low_complexity 1 23 0 639 230 104 123 chr5 66075852 66076265 -137009267 + L2 LINE L2 2907 3311 -2 2002 198 67 51 chr5 66076386 66076876 -137008656 - MLT1D LTR MaLR -3 502 5 281 321 85 0 chr5 66077552 66077658 -137007874 + L2 LINE L2 3199 3313 0 301 299 62 10 chr5 66080963 66081060 -137004472 + MER91A DNA MER1_type 1 102 -94 976 137 0 69 chr5 66081564 66081739 -137003793 - FRAM SINE Alu -5 171 9 4300 146 22 15 chr5 66082126 66082854 -137002678 + L1MA8 LINE L1 5420 6152 -139 218 289 158 72 chr5 66083567 66083719 -137001813 - L3 LINE CR1 -3 1574 1410 554 302 94 5 chr5 66083781 66083993 -137001539 - MIR SINE MIR -29 233 3 526 289 60 104 chr5 66084464 66085000 -137000532 + LTR67 LTR ERVL 23 534 -23 2487 59 0 0 chr5 66085315 66085604 -136999928 + AluY SINE Alu 20 308 -3 1826 110 0 0 chr5 66085705 66085942 -136999590 + AluSq SINE Alu 1 237 -76 325 348 36 0 chr5 66087382 66087520 -136998012 + MIR SINE MIR 108 250 -12 208 311 163 15 chr5 66088073 66088208 -136997324 - MIR3 SINE MIR -39 169 15 210 281 0 35 chr5 66088502 66088559 -136996973 - L2 LINE L2 -4 3309 3255 680 300 24 9 chr5 66088595 66088805 -136996727 - MIR SINE MIR -29 233 21 222 338 0 0 chr5 66088866 66088934 -136996598 + MIR SINE MIR 173 240 -22 698 210 63 44 chr5 66089532 66089737 -136995795 + MER3 DNA MER1_type 1 209 0 191 366 84 0 chr5 66089947 66090078 -136995454 - MIR3 SINE MIR -2 206 65 245 301 163 31 chr5 66090776 66090972 -136994560 - MIR SINE MIR -30 232 11 2476 88 3 0 chr5 66092500 66092808 -136992724 - AluSx SINE Alu -3 309 1 402 0 0 0 chr5 66092814 66092860 -136992672 + MADE1 DNA Mariner 35 80 0 1058 250 94 17 chr5 66092866 66093352 -136992180 + MLT1G LTR MaLR 2 537 0 712 288 100 58 chr5 66094006 66094457 -136991075 - L2 LINE L2 -2 3311 2842 213 39 0 0 chr5 66094587 66094613 -136990919 + (CAT)n Simple_repeat Simple_repeat 2 27 0 431 271 50 7 chr5 66095673 66095813 -136989719 - MIR SINE MIR -55 207 62 656 262 53 34 chr5 66095929 66096135 -136989397 - MIR SINE MIR -22 240 31 411 336 104 17 chr5 66097849 66098090 -136987442 - MIR SINE MIR 0 262 1 208 155 52 17 chr5 66098505 66098563 -136986969 + GA-rich Low_complexity Low_complexity 2 61 0 200 208 0 0 chr5 66098739 66098787 -136986745 + T-rich Low_complexity Low_complexity 1 48 0 363 271 37 0 chr5 66100213 66100320 -136985212 + MLT1J1 LTR MaLR 70 180 -266 5907 102 255 89 chr5 66100329 66101785 -136983747 + pTR5 LTR ERV1 741 2438 0 383 286 66 46 chr5 66101827 66102023 -136983509 + MLT1J2 LTR MaLR 248 447 -3 194 260 233 0 chr5 66102293 66102366 -136983166 - MIR SINE MIR -93 169 80 1869 106 42 3 chr5 66103645 66103929 -136981603 - L1MA1 LINE L1 0 6302 6008 1009 281 79 27 chr5 66104078 66104484 -136981048 + L1MC4a LINE L1 5522 5948 -1860 291 290 22 29 chr5 66104754 66104892 -136980640 + L1MEc LINE L1 37 173 -6223 264 235 76 23 chr5 66105497 66105629 -136979903 + L1MEc LINE L1 656 794 -5411 38412 86 11 7 chr5 66105637 66111753 -136973779 + L1PA6 LINE L1 11 6154 0 1861 271 62 63 chr5 66111736 66112847 -136972685 + L1MEc LINE L1 824 1935 -4461 * 1928 151 10 16 chr5 66112847 66113158 -136972374 + AluJo SINE Alu 1 309 -3 1861 271 62 63 chr5 66113158 66113345 -136972187 + L1MEc LINE L1 1935 2121 -4275 207 277 15 0 chr5 66113409 66113474 -136972058 + A-rich Low_complexity Low_complexity 1 66 0 181 317 65 81 chr5 66113660 66113783 -136971749 - MIR SINE MIR -15 247 127 185 330 82 41 chr5 66113784 66113881 -136971651 + L2 LINE L2 3151 3251 -21 3543 187 62 3 chr5 66114176 66114898 -136970634 - L1P LINE L1 -1607 4539 3775 307 267 157 29 chr5 66115397 66115569 -136969963 + L2 LINE L2 2832 3025 -288 7416 59 11 12 chr5 66115604 66117183 -136968349 - SVA Other Other -760 1383 1 1922 179 8 8 chr5 66117191 66117575 -136967957 - L1 LINE L1 -2365 3781 3395 6389 110 19 2 chr5 66117575 66119152 -136966380 + L1PA15 LINE L1 4572 6162 -3 285 252 100 122 chr5 66122051 66122281 -136963251 + MIR SINE MIR 32 256 -6 * 592 306 96 13 chr5 66122276 66122505 -136963027 + MIR SINE MIR 15 262 0 751 261 43 28 chr5 66123365 66123618 -136961914 + L2 LINE L2 3035 3291 -22 313 286 222 6 chr5 66123988 66124159 -136961373 + L1MC/D LINE L1 5613 5820 -1988 797 333 60 42 chr5 66124653 66125173 -136960359 + L2 LINE L2 2413 2941 -373 280 356 40 90 chr5 66125344 66125743 -136959789 - L2 LINE L2 -4 3268 2890 847 231 148 0 chr5 66125799 66126015 -136959517 - MIR SINE MIR 0 262 15 212 393 66 8 chr5 66126041 66126163 -136959369 - L2 LINE L2 -553 2761 2633 6907 57 8 3 chr5 66126167 66127657 -136957875 + L1PA7 LINE L1 4652 6148 -6 194 296 95 37 chr5 66128075 66128264 -136957268 - L2 LINE L2 -1210 2104 1905 187 29 0 59 chr5 66129004 66129038 -136956494 + (CCCA)n Simple_repeat Simple_repeat 1 32 0 473 321 102 40 chr5 66129414 66129837 -136955695 - L2 LINE L2 0 3272 2824 327 407 7 0 chr5 66130121 66130261 -136955271 - L2 LINE L2 -580 2734 2594 338 255 80 48 chr5 66130423 66130674 -136954858 + L1ME LINE L1 4872 5130 -1016 1095 149 11 0 chr5 66130695 66130883 -136954649 + L1MB1 LINE L1 5979 6168 0 485 309 93 22 chr5 66131088 66131370 -136954162 + L1ME LINE L1 5368 5664 -457 22 35 0 0 chr5 66133313 66133342 -136952190 + AT_rich Low_complexity Low_complexity 1 29 0 294 29 0 0 chr5 66134133 66134168 -136951364 + (CA)n Simple_repeat Simple_repeat 1 35 0 2678 7 0 0 chr5 66134423 66134724 -136950808 + L1PA3 LINE L1 5855 6155 0 30 0 0 0 chr5 66134724 66134754 -136950778 + AT_rich Low_complexity Low_complexity 1 30 0 377 232 0 0 chr5 66134754 66134823 -136950709 - FLAM SINE Alu -15 118 50 498 88 0 0 chr5 66134823 66134891 -136950641 - L1P1 LINE L1 -477 5678 5611 590 27 0 0 chr5 66134891 66134964 -136950568 + L1PA3 LINE L1 6081 6155 0 309 210 26 4 chr5 66134988 66135091 -136950441 + L1MD2 LINE L1 6018 6140 -43 893 110 0 0 chr5 66136311 66136447 -136949085 - L1MA4 LINE L1 -6 6294 6159 4465 81 10 0 chr5 66139286 66139882 -136945650 + L1PA10 LINE L1 5563 6164 -4 229 344 16 8 chr5 66139968 66140096 -136945436 + GA-rich Low_complexity Low_complexity 2 130 0 1246 284 95 30 chr5 66141006 66141439 -136944093 - MER115 DNA AcHobo -232 461 1 21 0 0 0 chr5 66142290 66142311 -136943221 + AT_rich Low_complexity Low_complexity 1 21 0 274 333 114 0 chr5 66142745 66142850 -136942682 + MIR SINE MIR 29 145 -117 275 238 0 16 chr5 66142992 66143055 -136942477 - L2 LINE L2 -1 3312 3251 2172 134 0 6 chr5 66143169 66143483 -136942049 + AluSx SINE Alu 1 312 0 317 24 24 0 chr5 66144048 66144090 -136941442 + (TG)n Simple_repeat Simple_repeat 2 44 0 216 273 0 0 chr5 66144921 66145064 -136940468 + CT-rich Low_complexity Low_complexity 1 143 0 998 325 72 7 chr5 66147091 66147537 -136937995 + MER115 DNA AcHobo 1 475 -218 247 108 27 0 chr5 66147519 66147556 -136937976 + Zaphod DNA AcHobo 3994 4031 0 * 259 271 54 39 chr5 66147637 66147766 -136937766 + MER94 DNA DNA 4 134 0 249 57 0 0 chr5 66148426 66148461 -136937071 + (CA)n Simple_repeat Simple_repeat 2 36 0 303 264 27 27 chr5 66148510 66148620 -136936912 - MER5A DNA MER1_type -1 188 79 230 314 21 43 chr5 66148526 66148666 -136936866 + MER5A DNA MER1_type 27 163 -26 * 1391 198 15 40 chr5 66149888 66150161 -136935371 + AluJo SINE Alu 1 266 -46 221 53 53 0 chr5 66150175 66150213 -136935319 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1665 134 17 127 chr5 66150709 66151120 -136934412 - MER47A DNA MER2_type 0 366 1 2129 114 0 0 chr5 66152093 66152407 -136933125 - AluSg SINE Alu 0 314 1 1953 153 138 11 chr5 66152698 66153076 -136932456 - MSTA LTR MaLR -2 426 1 1909 187 0 0 chr5 66153204 66153514 -136932018 - AluJb SINE Alu 0 312 3 973 182 0 39 chr5 66153726 66153907 -136931625 - AluJo SINE Alu -138 174 1 418 341 164 14 chr5 66153928 66154568 -136930964 + L2 LINE L2 1519 2254 -1060 14742 135 18 17 chr5 66154569 66156978 -136928554 + Tigger1 DNA MER2_type 7 2417 -1 281 270 150 10 chr5 66157078 66157178 -136928354 + MIR SINE MIR 78 191 -71 934 232 12 64 chr5 66157222 66157472 -136928060 - MIR SINE MIR -21 241 5 1717 182 96 3 chr5 66157768 66158103 -136927429 + MER47A DNA MER2_type 1 366 0 329 228 0 10 chr5 66158104 66158205 -136927327 + GA-rich Low_complexity Low_complexity 2 101 0 * 888 106 11 28 chr5 66158198 66158377 -136927155 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 264 125 0 0 chr5 66158399 66158439 -136927093 + L1MC4a LINE L1 7612 7651 -157 893 154 18 61 chr5 66158464 66158676 -136926856 + L1MC4 LINE L1 7846 7992 -3 1802 178 46 0 chr5 66159152 66159175 -136926357 - MLT1A1 LTR MaLR 0 365 345 489 34 0 0 chr5 66159175 66159234 -136926298 + (TA)n Simple_repeat Simple_repeat 2 60 0 1802 178 46 0 chr5 66159234 66159559 -136925973 - MLT1A1 LTR MaLR -20 345 1 199 316 29 15 chr5 66160309 66160393 -136925139 - MIR3 SINE MIR -54 154 69 447 307 9 0 chr5 66160701 66160815 -136924717 - L2 LINE L2 -1 3312 3198 189 328 0 0 chr5 66160853 66160917 -136924615 + MIR SINE MIR 89 152 -110 704 269 196 19 chr5 66161461 66162108 -136923424 + L2 LINE L2 2538 3308 -5 219 294 147 0 chr5 66162126 66162228 -136923304 - L2 LINE L2 -940 2374 2258 318 247 182 105 chr5 66162855 66163151 -136922381 + MLT1H LTR MaLR 231 549 0 276 292 143 42 chr5 66164055 66164223 -136921309 - MIR SINE MIR -70 192 8 1016 203 55 23 chr5 66164676 66164893 -136920639 - MER58A DNA MER1_type 0 224 1 981 217 5 0 chr5 66165480 66165664 -136919868 - MIR SINE MIR -50 212 28 491 84 56 0 chr5 66165675 66165746 -136919786 + MADE1 DNA Mariner 4 78 -2 430 227 43 57 chr5 66167092 66167119 -136918413 + MLT1J2 LTR MaLR 1 27 -423 1540 219 22 22 chr5 66167119 66167484 -136918048 + MLT1A1 LTR MaLR 1 365 0 430 227 43 57 chr5 66167484 66167597 -136917935 + MLT1J2 LTR MaLR 27 139 -311 313 283 63 68 chr5 66167633 66167824 -136917708 + MLT1J2 LTR MaLR 259 448 -2 751 214 0 32 chr5 66168268 66168422 -136917110 - AluJb SINE Alu -30 282 134 186 354 123 0 chr5 66168585 66168650 -136916882 + L2 LINE L2 3147 3219 -53 21 0 0 0 chr5 66169276 66169297 -136916235 + AT_rich Low_complexity Low_complexity 1 21 0 190 289 0 0 chr5 66170021 66170066 -136915466 - MIR SINE MIR -108 154 110 242 71 0 24 chr5 66176475 66176517 -136909015 + (TTG)n Simple_repeat Simple_repeat 2 42 0 901 248 60 4 chr5 66176836 66177070 -136908462 + MIR SINE MIR 2 248 -14 1272 14 0 0 chr5 66177082 66177229 -136908303 + L1PA2 LINE L1 6009 6155 0 1668 154 23 49 chr5 66177253 66177559 -136907973 + AluJo SINE Alu 11 308 -4 2903 50 0 0 chr5 66177634 66177991 -136907541 + L1PA6 LINE L1 5792 6148 -6 180 111 0 0 chr5 66177995 66178022 -136907510 + (A)n Simple_repeat Simple_repeat 1 27 0 315 0 0 0 chr5 66178676 66178711 -136906821 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 339 328 15 88 chr5 66180404 66180608 -136904924 - MER5A DNA MER1_type 0 189 1 406 215 133 22 chr5 66181714 66181849 -136903683 - MIR SINE MIR -48 214 65 366 311 62 11 chr5 66182025 66182285 -136903247 - L1ME LINE L1 -297 5824 5552 1808 177 3 3 chr5 66182476 66182776 -136902756 - AluJb SINE Alu 0 312 13 363 44 0 0 chr5 66183241 66183286 -136902246 + (CA)n Simple_repeat Simple_repeat 2 46 0 230 259 10 0 chr5 66183358 66183418 -136902114 - MIR SINE MIR -77 131 67 253 289 41 0 chr5 66184323 66184420 -136901112 - MIR SINE MIR -44 218 118 1722 170 29 13 chr5 66185114 66185420 -136900112 + AluJb SINE Alu 1 311 -1 597 322 48 4 chr5 66185720 66185947 -136899585 + MIR SINE MIR 23 259 -3 243 274 28 38 chr5 66185955 66186061 -136899471 - MIR SINE MIR -94 168 64 7752 20 0 1 chr5 66186090 66187649 -136897883 - L1PA3 LINE L1 -3 6152 4595 329 85 0 0 chr5 66187650 66187697 -136897835 - L1P LINE L1 -6098 48 2 240 247 0 75 chr5 66191289 66191417 -136894115 + (CATG)n Simple_repeat Simple_repeat 1 118 0 412 190 58 0 chr5 66191954 66192075 -136893457 - L1ME4a LINE L1 -3 6118 5991 2108 111 17 0 chr5 66192174 66192462 -136893070 - AluSx SINE Alu -19 293 1 249 277 141 24 chr5 66192484 66192733 -136892799 - L1ME4a LINE L1 -365 5756 5479 194 330 152 27 chr5 66193391 66193503 -136892029 + L2 LINE L2 3138 3263 -9 3031 212 9 32 chr5 66193668 66193948 -136891584 + MER82 DNA MER2_type 2 287 -366 1649 120 0 4 chr5 66193948 66194207 -136891325 - AluSg/x SINE Alu 0 312 81 3031 212 9 32 chr5 66194207 66194591 -136890941 + MER82 DNA MER2_type 287 651 -2 221 347 71 24 chr5 66195800 66195970 -136889562 - L2 LINE L2 -587 2727 2550 1738 142 28 18 chr5 66196045 66196356 -136889176 - AluSx SINE Alu 0 314 1 279 0 0 0 chr5 66196605 66196636 -136888896 + (TAA)n Simple_repeat Simple_repeat 1 31 0 570 335 21 5 chr5 66196676 66196864 -136888668 - MIR SINE MIR -71 191 1 43 35 0 0 chr5 66196881 66196938 -136888594 + AT_rich Low_complexity Low_complexity 1 57 0 586 225 63 35 chr5 66197683 66197967 -136887565 + L1MEc LINE L1 1532 1823 -4573 1578 249 150 33 chr5 66198057 66199324 -136886208 + L1MEc LINE L1 2103 3464 -2751 1499 253 87 40 chr5 66199330 66200200 -136885332 + L1MEc LINE L1 3604 4514 -1701 500 289 66 22 chr5 66200220 66200538 -136884994 - L1M4 LINE L1 -1359 4787 4456 237 132 0 0 chr5 66200669 66200707 -136884825 + (T)n Simple_repeat Simple_repeat 1 38 0 347 238 150 96 chr5 66200830 66201070 -136884462 - MER112 DNA MER1_type 0 260 8 520 219 19 0 chr5 66201761 66201866 -136883666 - MIR SINE MIR 0 262 156 7667 174 111 17 chr5 66201873 66203478 -136882054 + MER52A LTR ERV1 1 1755 0 257 317 12 0 chr5 66203478 66203560 -136881972 - MIR SINE MIR -113 149 67 405 273 102 17 chr5 66206546 66206722 -136878810 + MIR SINE MIR 2 192 -70 213 39 0 0 chr5 66207385 66207411 -136878121 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 469 309 28 37 chr5 66208001 66208218 -136877314 + MIR SINE MIR 3 209 -53 547 312 181 0 chr5 66208236 66208457 -136877075 - MIR SINE MIR 0 262 2 198 300 280 10 chr5 66208849 66208949 -136876583 - L2 LINE L2 0 3272 3146 2227 87 10 0 chr5 66209263 66209562 -136875970 + AluSc SINE Alu 2 303 -6 362 337 66 73 chr5 66209650 66210059 -136875473 + L2 LINE L2 2848 3253 -19 2771 152 13 65 chr5 66210222 66210756 -136874776 + MLT2B2 LTR ERVL 2 507 -8 230 300 161 8 chr5 66210771 66210901 -136874631 - L2 LINE L2 -5 3308 3159 199 224 20 7 chr5 66210933 66210982 -136874550 + MIR SINE MIR 57 104 -104 429 265 138 56 chr5 66211301 66211497 -136874035 + L2 LINE L2 3056 3267 -5 1505 226 54 49 chr5 66212223 66212758 -136872774 - MER68 LTR ERV1 0 562 25 252 319 39 78 chr5 66212978 66213210 -136872322 - L2 LINE L2 -460 2854 2632 558 310 118 18 chr5 66214668 66214897 -136870635 + MIR SINE MIR 11 262 0 3780 113 111 113 chr5 66215207 66216613 -136868919 + pTR5 LTR ERV1 727 2438 0 2222 85 0 39 chr5 66216818 66217123 -136868409 + AluY SINE Alu 1 293 -18 224 268 146 24 chr5 66217334 66217416 -136868116 - MIR3 SINE MIR -51 157 66 1759 169 24 0 chr5 66217889 66218185 -136867347 - AluJb SINE Alu -6 306 4 1264 182 191 9 chr5 66218855 66219190 -136866342 + MSTD LTR MaLR 1 396 0 3841 165 38 34 chr5 66219196 66219220 -136866312 - L1MA9 LINE L1 -60 6252 6230 1840 154 138 16 chr5 66219220 66219662 -136865870 - LTR54B LTR ERV1 -2 496 1 3841 165 38 34 chr5 66219662 66220132 -136865400 - L1MA9 LINE L1 -82 6230 5751 297 0 0 0 chr5 66220132 66220165 -136865367 + (CA)n Simple_repeat Simple_repeat 2 34 0 3841 165 38 34 chr5 66220165 66220546 -136864986 - L1MA9 LINE L1 -561 5751 5373 21 0 0 0 chr5 66220962 66220983 -136864549 + AT_rich Low_complexity Low_complexity 1 21 0 229 293 58 21 chr5 66221228 66221416 -136864116 - L1M4 LINE L1 -1322 4824 4630 548 327 77 39 chr5 66221532 66221972 -136863560 - L1M4 LINE L1 -1881 4265 3809 254 183 58 58 chr5 66221987 66222091 -136863441 - L1P LINE L1 -2374 3772 3669 402 348 90 19 chr5 66222094 66222471 -136863061 - L1M4 LINE L1 -2483 3663 3260 1375 178 64 8 chr5 66222489 66222925 -136862607 + L1MB4 LINE L1 5704 6180 0 301 277 118 22 chr5 66223027 66223298 -136862234 - L1M4 LINE L1 -2993 3153 2857 351 300 129 24 chr5 66224005 66224338 -136861194 - HAL1b LINE L1 -935 413 46 532 217 138 26 chr5 66225609 66225761 -136859771 + MER5A DNA MER1_type 21 189 0 563 251 195 32 chr5 66227193 66227444 -136858088 + L2 LINE L2 1771 2062 -1252 392 214 56 90 chr5 66228149 66228324 -136857208 - MIR3 SINE MIR -34 174 7 2306 91 0 3 chr5 66228636 66228933 -136856599 + AluSq SINE Alu 5 300 -13 776 273 54 11 chr5 66231738 66231998 -136853534 + ERVL LTR ERVL 5166 5436 -328 289 265 136 15 chr5 66232291 66232423 -136853109 + LTR41 LTR ERVL 6 153 -620 1944 124 50 0 chr5 66232435 66232733 -136852799 + AluSq SINE Alu 1 313 0 526 238 16 97 chr5 66233048 66233296 -136852236 + LTR41 LTR ERVL 510 737 -36 6455 154 45 7 chr5 66233378 66233638 -136851894 + L1MA4A LINE L1 3940 4189 -2114 1852 188 0 0 chr5 66233638 66233941 -136851591 + AluJb SINE Alu 1 303 -9 6455 154 45 7 chr5 66233941 66234146 -136851386 + L1MA4A LINE L1 4189 4385 -1918 180 0 0 0 chr5 66234146 66234166 -136851366 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6455 154 45 7 chr5 66234166 66235970 -136849562 + L1MA4A LINE L1 4385 6297 -6 21 57 0 0 chr5 66235970 66236005 -136849527 + AT_rich Low_complexity Low_complexity 1 35 0 3046 157 27 46 chr5 66236153 66236827 -136848705 + L1MB8 LINE L1 5503 6163 -15 301 294 106 24 chr5 66237161 66237331 -136848201 + MIR3 SINE MIR 14 197 -11 21 0 0 0 chr5 66237661 66237682 -136847850 + AT_rich Low_complexity Low_complexity 1 21 0 39 22 0 0 chr5 66238208 66238254 -136847278 + AT_rich Low_complexity Low_complexity 1 46 0 1984 150 4 0 chr5 66238276 66238608 -136846924 + AluSx SINE Alu 1 333 0 581 246 40 22 chr5 66238678 66238902 -136846630 - MER69 DNA AcHobo -78 2448 2221 468 283 30 34 chr5 66239173 66239438 -136846094 - MER69 DNA AcHobo -1166 1360 1097 290 197 16 0 chr5 66239531 66239592 -136845940 - MER58A DNA MER1_type 0 224 163 1653 152 0 15 chr5 66239605 66239868 -136845664 - AluJb SINE Alu -9 303 45 318 167 83 0 chr5 66239887 66239947 -136845585 - AluJb SINE Alu -237 65 1 * 560 285 32 0 chr5 66239943 66240101 -136845431 - MER58A DNA MER1_type 0 166 4 1031 260 64 70 chr5 66240194 66240697 -136844835 - MER69 DNA AcHobo -1510 1016 517 38497 56 4 6 chr5 66240707 66246739 -136838793 + L1PA4 LINE L1 135 6155 0 587 260 60 39 chr5 66246741 66247157 -136838375 + L1M4 LINE L1 2800 3224 -2922 898 186 34 11 chr5 66247822 66247999 -136837533 + MER5A DNA MER1_type 8 188 -1 22697 74 7 10 chr5 66248828 66252182 -136833350 - L1P LINE L1 -2369 3777 437 30651 44 2 2 chr5 66252501 66256477 -136829055 - L1P LINE L1 -1881 4265 291 28 48 0 0 chr5 66256728 66256770 -136828762 + AT_rich Low_complexity Low_complexity 1 42 0 1358 216 0 18 chr5 66256823 66257096 -136828436 + AluJb SINE Alu 2 269 -43 508 175 10 0 chr5 66257253 66257356 -136828176 - L1MB7 LINE L1 -12 6172 6069 198 191 0 0 chr5 66257503 66257545 -136827987 + A-rich Low_complexity Low_complexity 5 46 0 850 214 92 5 chr5 66258120 66258326 -136827206 - MER58A DNA MER1_type 0 224 1 682 212 91 71 chr5 66258398 66258794 -136826738 - LTR37B LTR ERV1 0 468 65 1385 158 187 59 chr5 66258867 66258939 -136826593 - MSTB LTR MaLR -2 424 363 4025 73 0 0 chr5 66258939 66259460 -136826072 - L1PA8A LINE L1 0 6131 5611 1385 158 187 59 chr5 66259460 66259761 -136825771 - MSTB LTR MaLR -63 363 3 1968 98 35 96 chr5 66259769 66260165 -136825367 - MSTA-int LTR MaLR -7 1573 1202 2145 99 0 0 chr5 66260289 66260592 -136824940 - L1P LINE L1 -5837 309 7 2019 116 16 0 chr5 66260596 66260916 -136824616 - MSTA-int LTR MaLR -1253 327 3 1925 122 151 19 chr5 66260918 66261296 -136824236 - MSTA LTR MaLR 0 428 1 1185 261 52 71 chr5 66261470 66262072 -136823460 + MLT1G1 LTR MaLR 1 590 -5 22 0 0 0 chr5 66262184 66262206 -136823326 + AT_rich Low_complexity Low_complexity 1 22 0 22 94 0 0 chr5 66262709 66262773 -136822759 + AT_rich Low_complexity Low_complexity 1 64 0 1896 239 27 29 chr5 66262796 66263316 -136822216 + MLT1F LTR MaLR 1 519 -23 615 253 38 11 chr5 66263654 66263840 -136821692 + LTR41 LTR ERVL 1 191 -582 414 261 65 83 chr5 66264217 66264493 -136821039 + LTR41 LTR ERVL 502 772 -1 273 140 0 0 chr5 66264585 66264642 -136820890 + (GA)n Simple_repeat Simple_repeat 1 57 0 445 216 36 36 chr5 66265746 66265885 -136819647 - MER104 DNA Tc2 -41 139 1 5490 111 30 22 chr5 66266027 66267285 -136818247 - L1PA15 LINE L1 0 6165 4906 38 51 0 0 chr5 66267702 66267761 -136817771 + AT_rich Low_complexity Low_complexity 1 59 0 328 304 128 70 chr5 66268979 66269292 -136816240 + L2 LINE L2 2941 3271 -1 368 310 52 9 chr5 66269906 66270022 -136815510 - MIR3 SINE MIR -54 154 34 21 0 0 0 chr5 66271327 66271348 -136814184 + AT_rich Low_complexity Low_complexity 1 21 0 2586 106 19 0 chr5 66271789 66272157 -136813375 + THE1C LTR MaLR 1 375 0 438 299 7 15 chr5 66274114 66274251 -136811281 + MIR SINE MIR 8 143 -119 398 255 170 44 chr5 66274279 66274750 -136810782 + L1ME LINE L1 1041 1570 -4645 1825 168 31 14 chr5 66274750 66275108 -136810424 - MLT1A1 LTR MaLR 0 365 2 398 255 170 44 chr5 66275108 66275139 -136810393 + L1ME LINE L1 1570 1596 -4619 293 155 56 14 chr5 66275148 66275219 -136810313 + L1MB3 LINE L1 6110 6183 0 478 139 0 12 chr5 66275223 66275309 -136810223 + L1MB8 LINE L1 6093 6177 -1 308 254 36 21 chr5 66275770 66276011 -136809521 + L1ME LINE L1 2223 2518 -3697 1191 178 62 33 chr5 66276061 66276302 -136809230 + AluJo SINE Alu 46 293 -19 438 20 0 0 chr5 66276313 66276364 -136809168 + (CA)n Simple_repeat Simple_repeat 2 52 0 554 222 118 14 chr5 66276373 66276585 -136808947 + L1ME LINE L1 2650 2883 -3332 749 248 119 62 chr5 66276649 66277137 -136808395 + L1ME LINE L1 3673 4188 -2027 318 186 41 134 chr5 66277140 66277203 -136808329 - Tigger7 DNA MER2_type 0 2491 2438 2005 151 0 0 chr5 66277203 66277502 -136808030 - AluSx SINE Alu -13 299 1 318 186 41 134 chr5 66277502 66277534 -136807998 - Tigger7 DNA MER2_type -53 2438 2405 8298 121 30 19 chr5 66277534 66278870 -136806662 + Tigger1 DNA MER2_type 1 1350 -1068 741 241 51 10 chr5 66278869 66279064 -136806468 - Tigger7 DNA MER2_type -521 212 10 * 505 89 73 0 chr5 66279128 66279251 -136806281 + GA-rich Low_complexity Low_complexity 2 133 0 1792 225 66 31 chr5 66279274 66279817 -136805715 - MLT1F1 LTR MaLR -9 570 3 447 198 19 9 chr5 66280172 66280278 -136805254 + L1ME LINE L1 4566 4672 -1543 214 162 0 0 chr5 66280294 66280331 -136805201 + (TG)n Simple_repeat Simple_repeat 1 37 0 692 265 37 6 chr5 66280342 66280592 -136804940 + L1ME LINE L1 5402 5663 -576 24 67 0 0 chr5 66280637 66280682 -136804850 + AT_rich Low_complexity Low_complexity 1 45 0 216 396 45 0 chr5 66281399 66281510 -136804022 - L3b LINE CR1 -10 1573 1458 21 36 0 0 chr5 66283378 66283406 -136802126 + AT_rich Low_complexity Low_complexity 1 28 0 2718 115 83 7 chr5 66283908 66284294 -136801238 + MER9 LTR ERVK 34 460 -51 189 0 0 0 chr5 66284294 66284315 -136801217 + (TG)n Simple_repeat Simple_repeat 2 22 0 2718 115 83 7 chr5 66284315 66284372 -136801160 + MER9 LTR ERVK 460 511 0 2483 96 36 3 chr5 66285227 66285590 -136799942 + THE1C LTR MaLR 1 375 0 914 288 32 42 chr5 66285678 66286088 -136799444 + L1ME LINE L1 5411 5816 -305 703 192 45 169 chr5 66286145 66286411 -136799121 - MIR SINE MIR -17 245 13 395 207 0 9 chr5 66286479 66286595 -136798937 + GA-rich Low_complexity Low_complexity 4 118 0 25 31 0 0 chr5 66286742 66286774 -136798758 + AT_rich Low_complexity Low_complexity 1 32 0 383 272 98 40 chr5 66287107 66287280 -136798252 - MIR SINE MIR -74 188 6 470 329 122 9 chr5 66287294 66287516 -136798016 + MIR SINE MIR 2 248 -14 338 215 0 0 chr5 66287622 66287687 -136797845 - MIR SINE MIR -26 236 172 285 167 0 0 chr5 66288195 66288249 -136797283 + (TA)n Simple_repeat Simple_repeat 2 55 0 2397 85 10 0 chr5 66288590 66288895 -136796637 - AluSx SINE Alu -4 308 1 1522 159 68 9 chr5 66289488 66289809 -136795723 + L1MA7 LINE L1 5951 6290 -1 23 68 0 0 chr5 66290294 66290338 -136795194 + AT_rich Low_complexity Low_complexity 1 44 0 244 255 66 38 chr5 66290419 66290525 -136795007 - MER117 DNA MER1_type 0 197 89 1475 155 41 72 chr5 66290864 66291155 -136794377 + AluJo SINE Alu 1 282 -30 315 303 78 35 chr5 66291330 66291472 -136794060 - L2 LINE L2 -7 3306 3159 1052 299 81 30 chr5 66291832 66292553 -136792979 - L2 LINE L2 -1 3312 2541 313 22 43 0 chr5 66292810 66292856 -136792676 + (TTATA)n Simple_repeat Simple_repeat 2 49 0 26 50 0 0 chr5 66292964 66293004 -136792528 + AT_rich Low_complexity Low_complexity 1 40 0 1669 194 4 4 chr5 66293200 66293478 -136792054 + AluJo SINE Alu 1 278 -34 243 242 32 0 chr5 66293481 66293543 -136791989 + GA-rich Low_complexity Low_complexity 2 65 0 503 300 18 64 chr5 66294274 66294494 -136791038 + L2 LINE L2 3091 3300 -13 293 45 0 23 chr5 66294499 66294543 -136790989 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 181 206 29 0 chr5 66294573 66294607 -136790925 + MIR SINE MIR 34 68 -194 7373 138 47 20 chr5 66295350 66296515 -136789017 + Tigger1 DNA MER2_type 1 1204 -1214 2120 144 0 0 chr5 66296515 66296813 -136788719 + AluSx SINE Alu 1 298 -14 7373 138 47 20 chr5 66296813 66296914 -136788618 + Tigger1 DNA MER2_type 1204 1301 -1117 592 225 12 12 chr5 66296929 66297089 -136788443 + L1MC4 LINE L1 7743 7902 -140 283 325 33 8 chr5 66297646 66297766 -136787766 - L2 LINE L2 -973 2341 2219 * 347 283 87 22 chr5 66297760 66297898 -136787634 - L2 LINE L2 0 3313 3167 369 0 0 0 chr5 66298164 66298205 -136787327 + (TG)n Simple_repeat Simple_repeat 2 42 0 475 250 109 0 chr5 66298734 66298862 -136786670 - FLAM_A SINE Alu 0 142 1 2032 134 0 0 chr5 66299084 66299399 -136786133 + AluSx SINE Alu 1 315 0 41127 54 2 11 chr5 66299535 66304905 -136780627 + L1P LINE L1 1 5321 -825 1625 20 0 0 chr5 66304905 66305105 -136780427 + L1P LINE L1 5120 5319 -827 2275 27 3 3 chr5 66305105 66305486 -136780046 + L1P1 LINE L1 5118 5498 -657 2556 119 75 57 chr5 66305830 66306223 -136779309 + Tigger1 DNA MER2_type 798 1203 -1215 2120 144 0 0 chr5 66306223 66306521 -136779011 + AluSx SINE Alu 1 298 -14 2556 119 75 57 chr5 66306521 66306622 -136778910 + Tigger1 DNA MER2_type 1203 1301 -1117 592 225 12 12 chr5 66306637 66306797 -136778735 + L1MC4 LINE L1 7743 7902 -140 283 325 33 8 chr5 66307352 66307472 -136778060 - L2 LINE L2 -973 2341 2219 * 347 283 87 22 chr5 66307466 66307604 -136777928 - L2 LINE L2 0 3313 3167 405 0 0 0 chr5 66307870 66307915 -136777617 + (TG)n Simple_repeat Simple_repeat 2 46 0 475 250 109 0 chr5 66308444 66308572 -136776960 - FLAM_A SINE Alu 0 142 1 2032 134 0 0 chr5 66308794 66309109 -136776423 + AluSx SINE Alu 1 315 0 43000 50 3 0 chr5 66309245 66315380 -136770152 + L1PA4 LINE L1 1 6149 -6 28 0 0 0 chr5 66315380 66315408 -136770124 + AT_rich Low_complexity Low_complexity 1 28 0 2806 58 28 0 chr5 66315408 66315768 -136769764 + L1PA5 LINE L1 5770 6139 -15 352 256 56 24 chr5 66315955 66316080 -136769452 - HsTC2 DNA Tc2 -1009 889 761 4282 232 80 37 chr5 66316163 66318710 -136766822 - L1ME1 LINE L1 -9 6226 3585 314 229 70 0 chr5 66318705 66318809 -136766723 - L1M4 LINE L1 -3326 2820 2705 * 4251 63 5 40 chr5 66318811 66319414 -136766118 - L1PA7 LINE L1 -3 6151 5570 439 256 16 118 chr5 66320275 66320595 -136764937 - L1ME1 LINE L1 -4981 1224 970 * 2759 154 141 11 chr5 66320588 66321154 -136764378 - L1MB7 LINE L1 -51 6133 5494 496 243 42 0 chr5 66321154 66321298 -136764234 + MER112 DNA MER1_type 29 178 -82 298 286 94 47 chr5 66321345 66321516 -136764016 - L2 LINE L2 -961 2353 2175 186 175 75 0 chr5 66322468 66322508 -136763024 - MIR SINE MIR -75 133 91 184 349 130 18 chr5 66322984 66323153 -136762379 + L3b LINE CR1 1182 1369 -214 1919 236 20 80 chr5 66323722 66324567 -136760965 - L1MA5 LINE L1 -450 5850 5068 249 204 0 0 chr5 66324567 66324611 -136760921 - LTR23 LTR ERV1 -73 364 321 1919 236 20 80 chr5 66324611 66324864 -136760668 - L1MA5 LINE L1 -1232 5068 4801 187 233 41 68 chr5 66326350 66326423 -136759109 - L2 LINE L2 -1746 1568 1498 445 299 86 91 chr5 66326734 66327272 -136758260 + L1M2 LINE L1 473 1007 -5842 441 282 136 19 chr5 66327576 66327789 -136757743 - MIR SINE MIR -12 250 13 398 217 258 10 chr5 66328066 66328264 -136757268 + MLT1H LTR MaLR 234 480 -69 2318 78 0 0 chr5 66328961 66329295 -136756237 + AluY SINE Alu 1 334 0 1408 99 6 0 chr5 66329471 66329652 -136755880 + AluSp SINE Alu 124 305 -8 307 235 15 0 chr5 66330114 66330182 -136755350 - Charlie8 DNA MER1_type -1000 1417 1349 426 247 54 59 chr5 66330251 66330437 -136755095 - Charlie8 DNA MER1_type -2164 253 69 2012 145 61 10 chr5 66331724 66332117 -136753415 + MSTA LTR MaLR 1 413 -15 32 0 0 0 chr5 66335049 66335081 -136750451 + AT_rich Low_complexity Low_complexity 1 32 0 235 326 0 11 chr5 66335655 66335744 -136749788 - L3b LINE CR1 -318 1265 1178 2138 68 86 7 chr5 66335916 66336194 -136749338 - AluY SINE Alu -11 300 1 192 373 36 9 chr5 66337008 66337118 -136748414 + L2 LINE L2 2562 2674 -640 207 0 0 0 chr5 66338794 66338817 -136746715 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 903 127 17 69 chr5 66341071 66341210 -136744322 - MER2 DNA MER2_type 0 345 215 3577 120 8 24 chr5 66341210 66341745 -136743787 + MER1A DNA MER1_type 2 527 0 903 127 17 69 chr5 66341745 66341778 -136743754 - MER2 DNA MER2_type -130 215 182 28 79 0 0 chr5 66342187 66342250 -136743282 + AT_rich Low_complexity Low_complexity 1 63 0 1234 234 95 36 chr5 66342627 66343153 -136742379 + MER34B LTR ERV1 5 561 -4 318 375 55 0 chr5 66343697 66343825 -136741707 + MIR3 SINE MIR 46 180 -28 21 36 0 0 chr5 66344283 66344311 -136741221 + AT_rich Low_complexity Low_complexity 1 28 0 341 193 0 96 chr5 66344433 66344516 -136741016 - AluSp SINE Alu -93 210 136 36 0 0 0 chr5 66344580 66344616 -136740916 + AT_rich Low_complexity Low_complexity 1 36 0 829 157 0 15 chr5 66344640 66344774 -136740758 + FLAM_A SINE Alu 2 133 0 364 273 118 20 chr5 66344776 66344919 -136740613 + L1M4 LINE L1 4629 4756 -1390 1046 138 22 76 chr5 66344919 66345143 -136740389 - MER20 DNA MER1_type -4 215 4 364 273 118 20 chr5 66345143 66345303 -136740229 + L1M4 LINE L1 4756 4962 -1184 405 308 19 19 chr5 66345319 66345475 -136740057 + MLT1G1 LTR MaLR 16 171 -424 333 226 36 0 chr5 66345553 66345637 -136739895 + MLT1H1 LTR MaLR 202 288 -302 2206 124 3 10 chr5 66345815 66346129 -136739403 + AluSx SINE Alu 1 312 0 829 222 16 39 chr5 66346525 66346836 -136738696 - L1P LINE L1 -827 5319 5016 * 8499 101 47 10 chr5 66346829 66346950 -136738582 - L1PBa LINE L1 -3420 3442 3327 2215 85 43 0 chr5 66346950 66347231 -136738301 - AluY SINE Alu -18 293 1 8499 101 47 10 chr5 66347231 66347309 -136738223 - L1PBa LINE L1 -3535 3327 3253 2024 165 27 11 chr5 66347309 66347678 -136737854 - THE1C LTR MaLR 0 375 1 8499 101 47 10 chr5 66347678 66349276 -136736256 - L1PBa LINE L1 -3609 3253 1580 5413 112 4 15 chr5 66349276 66350065 -136735467 + LTR17 LTR ERV1 1 780 0 4902 69 8 6 chr5 66350081 66350748 -136734784 + HERV17 LTR ERV1 17 684 -7942 243 125 0 0 chr5 66350918 66350958 -136734574 + (GA)n Simple_repeat Simple_repeat 1 40 0 9132 71 6 25 chr5 66350959 66352296 -136733236 + HERV17 LTR ERV1 704 2014 -6612 * 10126 70 1 5 chr5 66352281 66352884 -136732648 + HERV17 LTR ERV1 2430 3034 -5592 2454 72 0 0 chr5 66352884 66353177 -136732355 + AluY SINE Alu 1 293 -18 10126 70 1 5 chr5 66353177 66353907 -136731625 + HERV17 LTR ERV1 3034 3758 -4868 15446 48 5 1 chr5 66354007 66355952 -136729580 + HERV17 LTR ERV1 4068 6019 -2607 284 77 0 0 chr5 66355945 66355984 -136729548 + HERV17 LTR ERV1 7510 7548 -1078 * 2268 54 0 7 chr5 66355974 66356268 -136729264 + HERV17 LTR ERV1 8335 8626 0 4940 100 33 7 chr5 66356269 66357021 -136728511 + LTR17 LTR ERV1 2 773 -7 1802 81 15 7 chr5 66357029 66357300 -136728232 - L1PBa LINE L1 -5280 1583 1311 433 234 55 18 chr5 66357481 66357632 -136727900 + MLT1H1 LTR MaLR 420 555 0 306 225 153 34 chr5 66357712 66357921 -136727611 + L1ME LINE L1 5039 5272 -874 201 255 68 0 chr5 66357921 66358082 -136727450 + (TA)n Simple_repeat Simple_repeat 1 172 0 229 256 61 0 chr5 66358096 66358260 -136727272 + (TA)n Simple_repeat Simple_repeat 1 174 0 232 232 73 0 chr5 66358422 66358586 -136726946 + (TA)n Simple_repeat Simple_repeat 1 176 0 26 50 0 0 chr5 66358594 66358634 -136726898 + AT_rich Low_complexity Low_complexity 1 40 0 260 111 56 0 chr5 66358642 66358714 -136726818 + (TA)n Simple_repeat Simple_repeat 1 76 0 2242 99 0 3 chr5 66358714 66359008 -136726524 - AluSx SINE Alu -19 293 1 350 261 73 6 chr5 66359065 66359230 -136726302 + L1ME LINE L1 5325 5500 -662 208 292 34 11 chr5 66359377 66359466 -136726066 - MIR3 SINE MIR -10 198 108 2225 82 34 0 chr5 66360535 66360828 -136724704 + AluY SINE Alu 1 303 -8 661 189 20 0 chr5 66360893 66361041 -136724491 + L1M4 LINE L1 4586 4736 -1410 281 253 33 11 chr5 66361097 66361188 -136724344 + HERVL LTR ERVL 4705 4797 -857 414 318 24 35 chr5 66361276 66361708 -136723824 + HERVL LTR ERVL 4983 5366 -288 766 223 53 78 chr5 66361847 66362206 -136723326 + LTR16B LTR ERVL 111 460 -4 211 365 125 0 chr5 66362259 66362355 -136723177 - L2 LINE L2 -14 3258 3151 754 216 70 25 chr5 66362357 66362556 -136722976 + MER58A DNA MER1_type 13 220 -4 263 250 17 0 chr5 66362608 66362668 -136722864 + L2 LINE L2 3162 3222 -50 1884 125 57 38 chr5 66362709 66363077 -136722455 - THE1C LTR MaLR 0 375 1 369 317 16 32 chr5 66363132 66363255 -136722277 - MIR SINE MIR -63 145 25 196 355 32 0 chr5 66363426 66363488 -136722044 - L2 LINE L2 -40 3232 3169 217 281 132 18 chr5 66363562 66363676 -136721856 + L2 LINE L2 2966 3092 -180 196 304 0 0 chr5 66363767 66363813 -136721719 + L2 LINE L2 3201 3246 -26 864 86 78 0 chr5 66364557 66364685 -136720847 - MER85 DNA T2_type -1 138 1 21 0 0 0 chr5 66364748 66364769 -136720763 + AT_rich Low_complexity Low_complexity 1 21 0 370 235 38 45 chr5 66365356 66365488 -136720044 - LTR67 LTR ERVL 0 557 427 2275 98 0 13 chr5 66366544 66366859 -136718673 - AluY SINE Alu 0 311 1 707 187 0 53 chr5 66366859 66366926 -136718606 - FLAM_A SINE Alu -174 137 81 739 62 0 0 chr5 66366926 66367022 -136718510 + L1PA5 LINE L1 6059 6154 0 707 187 0 53 chr5 66367022 66367099 -136718433 - FLAM_A SINE Alu -230 81 1 252 100 0 0 chr5 66367349 66367389 -136718143 + (TTCTCC)n Simple_repeat Simple_repeat 6 45 0 297 51 0 0 chr5 66367918 66367957 -136717575 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 369 0 0 0 chr5 66367956 66367997 -136717535 + (TC)n Simple_repeat Simple_repeat 1 41 0 221 254 68 0 chr5 66368099 66368158 -136717374 - MIR3 SINE MIR -6 202 140 1089 206 5 14 chr5 66368158 66368381 -136717151 - AluJo SINE Alu 0 312 92 187 279 16 33 chr5 66368383 66368444 -136717088 - MIR SINE MIR -64 144 85 450 248 19 32 chr5 66368754 66368911 -136716621 - L1ME1 LINE L1 -26 6140 5986 2088 222 50 24 chr5 66368921 66369972 -136715560 - L1ME1 LINE L1 -373 5793 4712 386 260 26 26 chr5 66370082 66370236 -136715296 + GA-rich Low_complexity Low_complexity 2 155 0 191 191 16 95 chr5 66370614 66370677 -136714855 + MIR SINE MIR 141 198 -64 317 327 75 5 chr5 66371513 66371709 -136713823 + MIR SINE MIR 16 218 -44 2039 227 18 45 chr5 66371811 66372415 -136713117 + L1MB3 LINE L1 1278 1865 -4984 597 213 49 0 chr5 66372420 66372542 -136712990 - FLAM_A SINE Alu -14 128 1 1318 163 18 42 chr5 66372544 66372739 -136712793 + L1MB3 LINE L1 1861 2046 -4803 3478 29 5 2 chr5 66372739 66373157 -136712375 + L1PA4 LINE L1 5734 6152 -3 1318 163 18 42 chr5 66373157 66373292 -136712240 + L1MB3 LINE L1 2046 2183 -4666 * 9395 151 32 11 chr5 66373265 66373782 -136711750 + L1MB3 LINE L1 4034 4539 -2384 1867 164 3 10 chr5 66373782 66374081 -136711451 + AluJb SINE Alu 2 298 -14 9395 151 32 11 chr5 66374081 66375694 -136709838 + L1MB3 LINE L1 4539 6180 -743 572 172 31 16 chr5 66378822 66378950 -136706582 + L1MB3 LINE L1 6753 6882 -3 2295 96 3 0 chr5 66378963 66379256 -136706276 - AluSx SINE Alu -18 294 1 293 313 97 7 chr5 66379485 66379629 -136705903 - L2 LINE L2 -5 3267 3111 409 327 114 18 chr5 66379793 66380013 -136705519 + MIR SINE MIR 21 261 -1 197 241 95 78 chr5 66380059 66380175 -136705357 + MIR3 SINE MIR 1 118 -90 281 292 42 14 chr5 66380494 66380566 -136704966 + MIR SINE MIR 21 94 -168 224 278 0 19 chr5 66380876 66380930 -136704602 - MIR SINE MIR -147 115 63 1805 168 0 42 chr5 66381191 66381500 -136704032 + AluJb SINE Alu 1 296 -16 196 29 29 29 chr5 66382337 66382371 -136703161 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 197 302 16 16 chr5 66382563 66382626 -136702906 + L2 LINE L2 3230 3292 -21 2306 127 0 0 chr5 66382650 66382958 -136702574 - AluSx SINE Alu -3 309 2 2238 248 70 24 chr5 66383220 66383419 -136702113 + L1ME3A LINE L1 5285 5474 -692 3114 163 39 12 chr5 66383419 66384064 -136701468 + L1MA7 LINE L1 5620 6281 -10 2238 248 70 24 chr5 66384064 66384712 -136700820 + L1ME3A LINE L1 5474 6119 -47 360 299 197 8 chr5 66386039 66386328 -136699204 - L1ME LINE L1 -550 5612 5272 259 313 30 10 chr5 66386353 66386452 -136699080 + L2 LINE L2 3209 3309 -4 349 277 119 30 chr5 66386455 66386758 -136698774 - L1ME LINE L1 -884 5262 4933 2578 143 14 28 chr5 66386762 66387194 -136698338 - MSTB LTR MaLR 0 426 1 2336 89 0 3 chr5 66387399 66387702 -136697830 - AluSg SINE Alu -7 303 2 354 304 68 19 chr5 66389824 66389985 -136695547 + MLT1H LTR MaLR 6 174 -375 226 231 90 13 chr5 66390160 66390238 -136695294 + MLT1H LTR MaLR 420 503 -46 1902 94 8 0 chr5 66390277 66390521 -136695011 - AluSq SINE Alu -14 299 54 429 291 54 31 chr5 66392595 66392853 -136692679 + MER34 LTR ERV1 1 264 -278 1675 135 52 52 chr5 66392996 66393322 -136692210 - MER50 LTR ERV1 -12 722 397 1591 85 24 28 chr5 66393317 66393565 -136691967 - MER50 LTR ERV1 -487 247 1 * 371 339 33 29 chr5 66393565 66393795 -136691737 + MER34 LTR ERV1 291 521 -21 383 304 149 30 chr5 66394237 66394438 -136691094 + MIR SINE MIR 19 243 -19 21 0 0 0 chr5 66394462 66394483 -136691049 + AT_rich Low_complexity Low_complexity 1 21 0 1996 145 0 0 chr5 66394728 66395018 -136690514 + AluJb SINE Alu 9 298 -14 693 267 110 93 chr5 66395051 66395784 -136689748 - L2 LINE L2 0 3313 2570 280 254 17 0 chr5 66395764 66395823 -136689709 + L2 LINE L2 3254 3313 0 * 631 255 13 13 chr5 66396427 66396580 -136688952 + MIR SINE MIR 86 238 -24 1417 220 35 73 chr5 66396667 66397149 -136688383 - MLT2B1 LTR ERVL -56 464 1 840 187 63 7 chr5 66397149 66397341 -136688191 + MLT1E3 LTR MaLR 25 205 -419 803 231 34 38 chr5 66397358 66397596 -136687936 + MLT1E3 LTR MaLR 390 626 0 1403 158 4 53 chr5 66399315 66399580 -136685952 + AluJo SINE Alu 55 306 -6 876 158 7 0 chr5 66399997 66400136 -136685396 - L1MC1 LINE L1 -18 6315 6176 2273 133 55 8 chr5 66400189 66400587 -136684945 + MSTA LTR MaLR 12 428 0 387 257 18 0 chr5 66400587 66400700 -136684832 - L1ME3A LINE L1 -25 6145 6031 352 161 0 0 chr5 66400710 66400766 -136684766 + tRNA-Gln-CAG tRNA tRNA 2 57 -18 1923 153 0 10 chr5 66401384 66401684 -136683848 - AluJb SINE Alu -13 299 3 1375 164 96 39 chr5 66401686 66401966 -136683566 - AluJo SINE Alu -16 296 1 713 215 81 118 chr5 66402357 66402803 -136682729 + L1MC5 LINE L1 7292 7708 -253 697 257 5 11 chr5 66402803 66402990 -136682542 - MER5A DNA MER1_type -3 186 1 713 215 81 118 chr5 66402990 66403186 -136682346 + L1MC5 LINE L1 7708 7910 -51 700 156 5 152 chr5 66403231 66403455 -136682077 + L1M4 LINE L1 3916 4106 -2040 6771 61 23 0 chr5 66403511 66404105 -136681427 - L1PA7 LINE L1 -7 6147 5548 2054 122 37 3 chr5 66404105 66404399 -136681133 - AluSg SINE Alu -6 304 1 6771 61 23 0 chr5 66404399 66404731 -136680801 - L1PA7 LINE L1 -606 5548 5225 11874 114 7 35 chr5 66404736 66405197 -136680335 - L1P3 LINE L1 -3825 2636 2163 6180 40 1 0 chr5 66405197 66405941 -136679591 + L1PA5 LINE L1 5410 6154 0 11874 114 7 35 chr5 66405941 66408141 -136677391 - L1P3 LINE L1 -4298 2163 8 1999 237 58 21 chr5 66408148 66408857 -136676675 + L1M4 LINE L1 4092 4826 -1320 2048 131 116 38 chr5 66409208 66409605 -136675927 + MSTA LTR MaLR 1 428 0 755 185 99 0 chr5 66409769 66409931 -136675601 - MER5B DNA MER1_type 0 178 1 259 290 40 0 chr5 66410256 66410380 -136675152 - L1MC4 LINE L1 0 8042 7914 408 20 0 0 chr5 66410422 66410471 -136675061 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 301 152 0 0 chr5 66410483 66410529 -136675003 + Tigger2 DNA MER2_type 1 46 -2672 2192 126 139 0 chr5 66410546 66410919 -136674613 + Tigger2 DNA MER2_type 2294 2718 0 260 263 116 24 chr5 66410932 66411604 -136673928 - L1MC4 LINE L1 -210 7832 7031 9083 186 27 19 chr5 66411604 66413486 -136672046 + L1PA15 LINE L1 3291 5198 -967 896 30 37 7 chr5 66413486 66413621 -136671911 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 9083 186 27 19 chr5 66413621 66414592 -136670940 + L1PA15 LINE L1 5198 6160 -5 260 263 116 24 chr5 66414592 66414860 -136670672 - L1MC4 LINE L1 -1011 7031 6789 496 327 20 7 chr5 66415027 66415177 -136670355 - L2 LINE L2 -4 3268 3117 226 380 19 19 chr5 66415270 66415378 -136670154 - L2 LINE L2 -194 3078 2971 198 0 0 0 chr5 66415463 66415485 -136670047 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 456 344 65 9 chr5 66415625 66415639 -136669893 - L2 LINE L2 -507 2807 2795 2149 125 17 0 chr5 66415639 66415935 -136669597 - AluSx SINE Alu -11 301 1 456 344 65 9 chr5 66415935 66416150 -136669382 - L2 LINE L2 -519 2795 2565 189 0 0 0 chr5 66416190 66416211 -136669321 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 66416755 66416776 -136668756 + AT_rich Low_complexity Low_complexity 1 21 0 3736 139 25 13 chr5 66416900 66417575 -136667957 - L1MB2 LINE L1 -28 6143 5461 605 110 0 0 chr5 66417575 66417657 -136667875 + AluSc SINE Alu 1 82 -227 993 119 0 0 chr5 66417657 66417791 -136667741 + AluSg/x SINE Alu 166 299 -13 2242 117 0 3 chr5 66417884 66418192 -136667340 + AluSx SINE Alu 1 307 -5 1290 239 71 45 chr5 66418896 66419403 -136666129 + MLT1G LTR MaLR 10 529 -61 554 219 21 16 chr5 66419403 66419595 -136665937 - L1PBa LINE L1 -2840 4022 3830 269 218 18 0 chr5 66419710 66419765 -136665767 + MLT1G LTR MaLR 474 529 -61 2279 208 10 16 chr5 66419766 66420142 -136665390 - L1 LINE L1 -2841 4021 3649 2098 66 102 0 chr5 66420142 66420416 -136665116 - AluY SINE Alu -9 302 1 2279 208 10 16 chr5 66420416 66420645 -136664887 - L1 LINE L1 -3213 3649 3420 2221 117 0 7 chr5 66420645 66420943 -136664589 + AluSg1 SINE Alu 1 296 -13 32017 107 30 21 chr5 66420951 66423305 -136662227 + L1PA7 LINE L1 11 2342 -3812 185 0 40 0 chr5 66423305 66423330 -136662202 + (CAA)n Simple_repeat Simple_repeat 2 27 0 32017 107 30 21 chr5 66423330 66426426 -136659106 + L1PA7 LINE L1 2342 5522 -632 2418 91 0 0 chr5 66426426 66426724 -136658808 + AluSc SINE Alu 1 298 -11 32017 107 30 21 chr5 66426724 66427362 -136658170 + L1PA7 LINE L1 5522 6153 -1 8043 131 51 5 chr5 66427383 66429332 -136656200 - L1PBa LINE L1 -3433 3429 1392 307 191 0 0 chr5 66429436 66429499 -136656033 - L1PBa LINE L1 -6794 69 7 2386 77 0 3 chr5 66429540 66429840 -136655692 + AluSx SINE Alu 1 299 -13 243 0 0 0 chr5 66429888 66429915 -136655617 + (CA)n Simple_repeat Simple_repeat 1 27 0 505 194 74 0 chr5 66429930 66430038 -136655494 + FLAM_C SINE Alu 1 116 -17 20407 136 52 19 chr5 66430397 66433583 -136651949 + L1M1 LINE L1 15 3349 -4216 1980 127 14 7 chr5 66433583 66433718 -136651814 + AluSq SINE Alu 1 134 -191 1931 103 66 4 chr5 66433718 66433991 -136651541 + AluSg SINE Alu 1 290 -20 1980 127 14 7 chr5 66433991 66434178 -136651354 + AluSq SINE Alu 134 325 0 20407 136 52 19 chr5 66434178 66434850 -136650682 + L1M1 LINE L1 3349 3998 -3567 1106 210 10 10 chr5 66434952 66435006 -136650526 + AluSq SINE Alu 84 137 -176 1852 124 58 4 chr5 66435006 66435281 -136650251 + AluSg SINE Alu 1 290 -20 1106 210 10 10 chr5 66435281 66435426 -136650106 + AluSq SINE Alu 136 283 -30 351 0 0 0 chr5 66435429 66435468 -136650064 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2979 189 19 23 chr5 66435474 66436356 -136649176 + L1M1 LINE L1 3340 4219 -3346 188 88 59 0 chr5 66436652 66436686 -136648846 + CT-rich Low_complexity Low_complexity 4 39 0 5209 129 59 3 chr5 66438421 66439568 -136645964 - L1PA13 LINE L1 -5 6158 4950 1276 138 0 0 chr5 66439570 66439771 -136645761 + AluSg/x SINE Alu 108 308 0 280 279 147 22 chr5 66439801 66439937 -136645595 + L2 LINE L2 3159 3311 -2 195 42 0 0 chr5 66440001 66440025 -136645507 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1490 268 168 13 chr5 66440027 66440770 -136644762 - L2 LINE L2 -16 3297 2425 725 257 104 5 chr5 66440770 66440972 -136644560 - MIR SINE MIR -38 224 3 246 175 0 50 chr5 66441020 66441100 -136644432 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 1300 199 75 8 chr5 66441247 66441513 -136644019 + AluJo SINE Alu 14 297 -15 843 221 143 32 chr5 66442283 66442592 -136642940 + MLT1G LTR MaLR 1 322 -273 238 257 56 42 chr5 66442655 66442806 -136642726 + MLT1G LTR MaLR 388 595 0 24 53 0 0 chr5 66442898 66442936 -136642596 + AT_rich Low_complexity Low_complexity 1 38 0 484 227 74 45 chr5 66443191 66443367 -136642165 + MLT1J LTR MaLR 37 217 -294 931 214 127 58 chr5 66444008 66444593 -136640939 - L1MC5 LINE L1 -36 7925 7301 24 53 0 0 chr5 66445334 66445372 -136640160 + AT_rich Low_complexity Low_complexity 1 38 0 23 24 0 24 chr5 66446018 66446044 -136639488 + AT_rich Low_complexity Low_complexity 1 27 -13 2194 103 34 0 chr5 66446044 66446335 -136639197 + AluSq SINE Alu 1 301 -12 23 24 0 24 chr5 66446335 66446349 -136639183 + AT_rich Low_complexity Low_complexity 27 40 0 243 0 0 0 chr5 66447768 66447795 -136637737 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 2405 79 0 0 chr5 66448750 66449041 -136636491 + AluSg SINE Alu 1 291 -19 302 284 104 22 chr5 66449198 66449332 -136636200 - L1ME4a LINE L1 -2 6119 5975 281 231 11 0 chr5 66449852 66449943 -136635589 - L1ME4a LINE L1 -303 5818 5727 951 224 107 18 chr5 66451350 66451766 -136633766 - L1ME3 LINE L1 -9 6153 5671 7655 30 0 0 chr5 66453005 66454213 -136631319 - L1PA3 LINE L1 0 6155 4948 882 92 33 0 chr5 66455573 66455693 -136629839 + AluSp/q SINE Alu 182 305 -8 204 299 75 0 chr5 66456051 66456118 -136629414 + L3b LINE CR1 1430 1501 -82 32 26 0 0 chr5 66457283 66457322 -136628210 + AT_rich Low_complexity Low_complexity 1 39 0 277 300 200 8 chr5 66458595 66458724 -136626808 + MIR3 SINE MIR 3 156 -52 419 309 46 46 chr5 66458724 66458899 -136626633 + MER5B DNA MER1_type 2 176 -2 1042 162 16 16 chr5 66458908 66459093 -136626439 + MER5A DNA MER1_type 5 189 0 3282 143 20 22 chr5 66460053 66460461 -136625071 - L1MB3 LINE L1 -1 6182 5774 2044 147 3 0 chr5 66460461 66460761 -136624771 - AluSx SINE Alu -11 301 1 3282 143 20 22 chr5 66460761 66460953 -136624579 - L1MB3 LINE L1 -409 5774 5583 2032 141 0 10 chr5 66463134 66463438 -136622094 + AluJb SINE Alu 1 301 -11 658 269 16 53 chr5 66463674 66463881 -136621651 - MIR3 SINE MIR -4 204 1 1783 159 52 7 chr5 66464075 66464365 -136621167 - AluJb SINE Alu -9 303 1 329 225 75 12 chr5 66464891 66464971 -136620561 + MIR SINE MIR 17 101 -161 992 198 28 12 chr5 66465678 66465925 -136619607 + MLT1A1 LTR MaLR 115 365 0 238 219 61 61 chr5 66466004 66466118 -136619414 - LTR33 LTR ERVL -356 165 52 340 284 77 46 chr5 66466924 66467118 -136618414 + L1 LINE L1 4783 4982 -1164 404 240 128 0 chr5 66467187 66467312 -136618220 + MER103 DNA DNA 25 165 -1 23 0 0 0 chr5 66467371 66467394 -136618138 + AT_rich Low_complexity Low_complexity 1 23 0 7876 181 18 37 chr5 66467412 66468129 -136617403 + L1 LINE L1 3553 4282 -1864 2330 97 0 3 chr5 66468129 66468428 -136617104 - AluSg SINE Alu -12 298 1 7876 181 18 37 chr5 66468428 66469583 -136615949 + L1 LINE L1 4282 5389 -757 3420 171 36 1 chr5 66469583 66470240 -136615292 + L1PA16 LINE L1 5473 6160 -6 21 0 0 0 chr5 66470298 66470319 -136615213 + AT_rich Low_complexity Low_complexity 1 21 0 2340 97 59 13 chr5 66470353 66470743 -136614789 + L1MA2 LINE L1 5897 6304 0 978 331 65 17 chr5 66470779 66471314 -136614218 - L2 LINE L2 -900 2414 1854 1866 141 76 20 chr5 66471710 66472065 -136613467 - THE1C LTR MaLR 0 375 1 10310 112 34 10 chr5 66472065 66473471 -136612061 - THE1C-int LTR MaLR 0 1580 131 2329 89 3 3 chr5 66473471 66473774 -136611758 - AluSp SINE Alu -10 303 1 10310 112 34 10 chr5 66473774 66473909 -136611623 - THE1C-int LTR MaLR -1449 131 1 1582 111 124 22 chr5 66473909 66474224 -136611308 - THE1C LTR MaLR 0 375 29 2156 129 3 3 chr5 66474283 66474592 -136610940 + AluSx SINE Alu 1 309 -3 31 0 0 0 chr5 66474909 66474940 -136610592 + AT_rich Low_complexity Low_complexity 1 31 0 727 229 93 0 chr5 66475099 66475282 -136610250 + MIR SINE MIR 23 222 -40 222 397 24 0 chr5 66475307 66475433 -136610099 + MER5B DNA MER1_type 2 130 -48 4904 131 27 57 chr5 66475434 66476422 -136609110 + L1MA7 LINE L1 5320 6278 -13 190 352 34 0 chr5 66476794 66476882 -136608650 + L3 LINE CR1 1385 1475 -102 310 386 1 26 chr5 66478358 66478512 -136607020 - MIR SINE MIR -67 141 15 367 253 240 14 chr5 66479474 66479620 -136605912 + MIR3 SINE MIR 23 201 -7 316 191 105 48 chr5 66479666 66479771 -136605761 - L1ME4a LINE L1 -9 6112 6002 2254 68 13 55 chr5 66480019 66480327 -136605205 + AluY SINE Alu 1 295 -16 318 285 166 0 chr5 66480388 66480539 -136604993 - L1ME4a LINE L1 -284 5837 5662 269 248 89 57 chr5 66481343 66481500 -136604032 + L1MC4a LINE L1 4672 4833 -1313 336 231 0 16 chr5 66481564 66481647 -136603885 + HsTC2 DNA Tc2 17 96 -1802 708 104 9 0 chr5 66481672 66481778 -136603754 + L1MB3 LINE L1 6040 6146 -37 2024 100 10 65 chr5 66481847 66482157 -136603375 + AluSx SINE Alu 1 293 -19 277 352 43 9 chr5 66482312 66482542 -136602990 + L1MC4a LINE L1 4904 5141 -1005 1706 248 79 47 chr5 66482597 66483209 -136602323 + L1MC4a LINE L1 5254 5893 -1915 2339 109 3 0 chr5 66483209 66483521 -136602011 + AluSq SINE Alu 1 313 0 1706 248 79 47 chr5 66483521 66483613 -136601919 + L1MC4a LINE L1 5893 5981 -1827 409 291 71 106 chr5 66484027 66484281 -136601251 + MIR SINE MIR 4 248 -14 1833 161 7 3 chr5 66484325 66484630 -136600902 - AluJb SINE Alu -6 306 1 906 195 42 64 chr5 66484642 66484885 -136600647 + L1PA16 LINE L1 5914 6147 -15 638 152 181 0 chr5 66485939 66486044 -136599488 + FLAM_A SINE Alu 1 124 -9 5466 99 34 16 chr5 66488588 66489354 -136596178 + LTR17 LTR ERV1 1 780 0 288 331 65 71 chr5 66489668 66489706 -136595826 - MARNA DNA Mariner -9 577 540 1112 217 14 5 chr5 66489706 66489923 -136595609 - MER20 DNA MER1_type 0 219 1 288 331 65 71 chr5 66489923 66490403 -136595129 - MARNA DNA Mariner -46 540 62 464 143 77 0 chr5 66491137 66491228 -136594304 + MER4A LTR ERV1 1 98 -566 1737 115 168 91 chr5 66491228 66491602 -136593930 + MER4A LTR ERV1 261 663 -1 7862 198 40 12 chr5 66491883 66493107 -136592425 + L1 LINE L1 2309 3600 -2546 2393 71 27 0 chr5 66493107 66493403 -136592129 + AluSp SINE Alu 1 304 -9 7862 198 40 12 chr5 66493403 66493932 -136591600 + L1 LINE L1 3600 4112 -2034 649 232 67 12 chr5 66493942 66494106 -136591426 - MLT1B LTR MaLR -50 340 168 311 284 63 0 chr5 66494261 66494283 -136591249 - MER2 DNA MER2_type -244 101 82 1769 179 3 3 chr5 66494283 66494573 -136590959 - AluJo SINE Alu -22 290 1 311 284 63 0 chr5 66494573 66494645 -136590887 - MER2 DNA MER2_type -263 82 1 535 168 35 9 chr5 66494651 66494764 -136590768 + L1 LINE L1 4132 4247 -1899 1986 149 3 7 chr5 66494767 66495075 -136590457 + AluJb SINE Alu 3 309 -3 1334 160 54 102 chr5 66495075 66495479 -136590053 + MLT2B3 LTR ERVL 174 554 0 247 204 0 0 chr5 66495568 66495612 -136589920 + MER5B DNA MER1_type 1 44 -134 430 231 51 17 chr5 66496122 66496239 -136589293 - MLT1L LTR MaLR -4 611 491 326 303 55 0 chr5 66498492 66498601 -136586931 - L2 LINE L2 0 3313 3199 591 269 0 7 chr5 66499243 66499392 -136586140 + Charlie8 DNA MER1_type 75 222 -2195 1461 272 114 11 chr5 66499400 66499856 -136585676 + MLT1J LTR MaLR 6 508 -3 1494 249 75 49 chr5 66499972 66500559 -136584973 + Charlie8 DNA MER1_type 367 968 -1449 2186 88 25 3 chr5 66500834 66501119 -136584413 + AluSp SINE Alu 1 291 -22 205 179 77 0 chr5 66501674 66501713 -136583819 + L2 LINE L2 3224 3265 -7 1984 127 11 0 chr5 66501916 66502200 -136583332 + AluSq SINE Alu 1 287 -26 183 42 0 0 chr5 66502200 66502224 -136583308 + (TA)n Simple_repeat Simple_repeat 2 25 0 1821 136 26 32 chr5 66502228 66502537 -136582995 + AluSx SINE Alu 1 307 -5 1701 188 3 3 chr5 66502890 66503172 -136582360 + AluJb SINE Alu 1 282 -30 2316 177 44 17 chr5 66503334 66503781 -136581751 + MLT1C LTR MaLR 3 467 0 425 298 67 67 chr5 66503882 66504191 -136581341 + L1ME3A LINE L1 5574 5885 -236 2342 108 3 0 chr5 66504191 66504497 -136581035 - AluSx SINE Alu -5 307 1 425 298 67 67 chr5 66504497 66504529 -136581003 + L1ME3A LINE L1 5884 5915 -206 231 143 54 54 chr5 66504857 66504913 -136580619 + L1ME3A LINE L1 6108 6163 -7 932 225 64 4 chr5 66505833 66506069 -136579463 + MIR SINE MIR 2 251 -11 33 107 0 0 chr5 66507503 66507634 -136577898 + GC_rich Low_complexity Low_complexity 1 131 0 276 77 0 0 chr5 66508630 66508669 -136576863 + (A)n Simple_repeat Simple_repeat 1 39 0 1683 252 74 64 chr5 66508884 66509038 -136576494 - L2 LINE L2 0 3313 3162 2267 105 0 10 chr5 66509038 66509351 -136576181 + AluSg SINE Alu 1 310 0 1683 252 74 64 chr5 66509351 66510267 -136575265 - L2 LINE L2 -151 3162 2153 240 216 118 39 chr5 66510425 66510527 -136575005 - L1M4 LINE L1 -1529 4617 4508 1960 141 10 0 chr5 66510600 66510891 -136574641 - AluJo SINE Alu -18 294 1 264 333 64 39 chr5 66511141 66511297 -136574235 - MER5A DNA MER1_type 0 189 30 286 328 52 9 chr5 66511334 66511450 -136574082 + L2 LINE L2 3176 3296 -17 1126 187 0 0 chr5 66512897 66513063 -136572469 - FAM SINE Alu -9 166 1 1684 149 52 99 chr5 66513106 66513307 -136572225 - MLT1A1 LTR MaLR 0 365 189 1772 178 10 3 chr5 66513307 66513605 -136571927 - AluJb SINE Alu -12 300 1 1684 149 52 99 chr5 66513605 66513786 -136571746 - MLT1A1 LTR MaLR -176 189 1 1976 130 3 23 chr5 66513858 66514158 -136571374 - AluSx SINE Alu -18 294 1 2303 87 10 7 chr5 66514474 66514773 -136570759 - AluSq SINE Alu -13 300 1 775 162 157 65 chr5 66515201 66515350 -136570182 - AluJo SINE Alu -25 287 116 183 42 0 0 chr5 66515350 66515374 -136570158 + (TTG)n Simple_repeat Simple_repeat 1 24 0 775 162 157 65 chr5 66515374 66515409 -136570123 - AluJo SINE Alu -196 116 86 296 213 0 0 chr5 66515410 66515457 -136570075 - AluSc SINE Alu -51 248 202 974 286 123 11 chr5 66515485 66515881 -136569651 + MLT1J2 LTR MaLR 1 444 -2 1141 259 93 34 chr5 66516045 66516674 -136568858 + L2 LINE L2 2612 3280 -33 22 0 0 0 chr5 66516678 66516700 -136568832 + AT_rich Low_complexity Low_complexity 1 22 0 3142 259 111 18 chr5 66516845 66517519 -136568013 + L2 LINE L2 1922 2532 -781 1736 155 161 16 chr5 66517519 66517835 -136567697 - MLT1A1 LTR MaLR -3 362 1 3142 259 111 18 chr5 66517835 66518330 -136567202 + L2 LINE L2 2532 3201 -112 851 173 0 7 chr5 66518520 66518670 -136566862 + AluSg/x SINE Alu 157 305 -7 2422 96 0 0 chr5 66518784 66519085 -136566447 + AluSx SINE Alu 1 301 -11 201 74 0 0 chr5 66519201 66519228 -136566304 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1976 150 0 16 chr5 66519277 66519590 -136565942 - AluJo SINE Alu -4 308 1 206 198 219 42 chr5 66519617 66519713 -136565819 - MIR SINE MIR -111 151 39 32 0 0 0 chr5 66519878 66519910 -136565622 + AT_rich Low_complexity Low_complexity 1 32 0 1402 134 0 19 chr5 66519910 66520119 -136565413 + AluSg/x SINE Alu 95 299 -13 11192 72 3 8 chr5 66520343 66521771 -136563761 + L1P LINE L1 900 2321 -3825 185 0 40 0 chr5 66521771 66521796 -136563736 + (CAA)n Simple_repeat Simple_repeat 2 27 0 11192 72 3 8 chr5 66521796 66521864 -136563668 + L1P LINE L1 2321 2388 -3758 483 221 0 0 chr5 66522160 66522264 -136563268 + MER5B DNA MER1_type 75 178 0 2230 131 116 38 chr5 66522428 66522825 -136562707 - MSTA LTR MaLR 0 428 1 358 218 12 123 chr5 66523869 66524039 -136561493 + L1ME4a LINE L1 5967 6117 -4 229 266 16 0 chr5 66524566 66524630 -136560902 - MARNA DNA Mariner -115 471 407 253 365 44 0 chr5 66524858 66524995 -136560537 - MARNA DNA Mariner -400 186 44 808 214 18 61 chr5 66524995 66525224 -136560308 + MER20 DNA MER1_type 1 219 0 655 269 21 58 chr5 66525733 66525940 -136559592 + MIR3 SINE MIR 1 204 -4 2002 141 10 0 chr5 66526176 66526474 -136559058 - AluJo SINE Alu -11 301 1 2220 112 0 10 chr5 66527347 66527660 -136557872 - AluSg SINE Alu 0 310 1 305 209 180 65 chr5 66527675 66527814 -136557718 + L2 LINE L2 3159 3313 0 6511 128 39 30 chr5 66528362 66529614 -136555918 + L1M1 LINE L1 1977 3240 -4325 541 279 109 101 chr5 66529923 66530748 -136554784 + L1M2 LINE L1 344 1115 -5734 1294 201 4 20 chr5 66530850 66531094 -136554438 - AluJo SINE Alu -70 242 3 1224 167 125 45 chr5 66531155 66531490 -136554042 - MSTC LTR MaLR 0 428 67 273 118 0 106 chr5 66532170 66532255 -136553277 + L1P LINE L1 3768 3843 -2303 9928 67 10 2 chr5 66532288 66533586 -136551946 + L1P LINE L1 3840 5147 -999 320 306 65 0 chr5 66535156 66535264 -136550268 - L2 LINE L2 0 3313 3199 223 301 56 56 chr5 66535446 66535589 -136549943 - L2 LINE L2 -556 2758 2616 306 341 99 56 chr5 66535636 66535888 -136549644 + L2 LINE L2 3010 3272 0 1796 206 34 28 chr5 66535895 66536283 -136549249 + MLT1B LTR MaLR 1 390 0 648 134 56 141 chr5 66536586 66536728 -136548804 - MLT1C LTR MaLR -56 411 205 2479 66 20 0 chr5 66537683 66537986 -136547546 + AluY SINE Alu 1 309 -2 238 313 0 0 chr5 66538176 66538240 -136547292 + HAL1b LINE L1 120 183 -1165 626 168 80 0 chr5 66538424 66538549 -136546983 + L1ME1 LINE L1 4474 4608 -1538 * 1787 235 34 9 chr5 66538547 66538985 -136546547 + L1ME1 LINE L1 5601 6049 -117 24 0 0 0 chr5 66541455 66541479 -136544053 + AT_rich Low_complexity Low_complexity 1 24 0 1258 156 60 50 chr5 66541556 66541839 -136543693 + MSTC LTR MaLR 143 428 0 1562 201 3 17 chr5 66541900 66542198 -136543334 + AluJo SINE Alu 3 296 -16 357 268 158 72 chr5 66542663 66543193 -136542339 + L2 LINE L2 1903 2478 -836 696 300 70 9 chr5 66544485 66544712 -136540820 - MIR SINE MIR 0 262 22 1402 134 0 19 chr5 66545506 66545715 -136539817 - AluSg/x SINE Alu -13 297 93 32 0 0 0 chr5 66545715 66545747 -136539785 + AT_rich Low_complexity Low_complexity 1 32 0 206 198 219 42 chr5 66545912 66546008 -136539524 + MIR SINE MIR 39 151 -111 2083 98 24 27 chr5 66546035 66546331 -136539201 + AluSx SINE Alu 1 295 -17 376 332 60 60 chr5 66546690 66546844 -136538688 + L1MC4a LINE L1 4885 5038 -1108 424 202 21 0 chr5 66546844 66546938 -136538594 + L1MD2 LINE L1 6255 6350 -9 376 332 60 60 chr5 66546938 66547102 -136538430 + L1MC4a LINE L1 5037 5203 -943 1190 235 35 35 chr5 66547144 66547489 -136538043 + L1MC4a LINE L1 5260 5604 -2204 317 187 0 22 chr5 66547492 66547583 -136537949 + (TATATG)n Simple_repeat Simple_repeat 4 92 0 305 184 69 35 chr5 66547588 66547675 -136537857 - L1MC4 LINE L1 -1339 6703 6614 257 261 11 11 chr5 66547716 66547808 -136537724 + L1MC4 LINE L1 6614 6705 -1337 * 539 204 78 18 chr5 66547795 66547962 -136537570 + L1MC4a LINE L1 5649 5825 -1983 2172 137 0 0 chr5 66547972 66548279 -136537253 + AluSx SINE Alu 1 307 -5 1082 49 0 0 chr5 66548661 66548783 -136536749 + AluSg SINE Alu 1 122 -188 2170 112 6 13 chr5 66549261 66549574 -136535958 + AluSx SINE Alu 1 311 -1 2160 199 69 45 chr5 66549660 66550197 -136535335 + MLT1E2 LTR MaLR 77 626 0 247 244 12 73 chr5 66551039 66551121 -136534411 + L2 LINE L2 3235 3311 -2 400 243 28 19 chr5 66551443 66551550 -136533982 + MER5C DNA MER1_type 17 124 -200 242 145 36 133 chr5 66551676 66551759 -136533773 + MER5C DNA MER1_type 249 323 -1 181 368 35 18 chr5 66552175 66552289 -136533243 - L2 LINE L2 -631 2683 2568 414 324 138 18 chr5 66552306 66552704 -136532828 - L2 LINE L2 -976 2338 1893 460 358 40 13 chr5 66553071 66553297 -136532235 + L2 LINE L2 3038 3269 -3 945 204 29 0 chr5 66553483 66553655 -136531877 - MER5B DNA MER1_type -1 177 1 1134 254 123 11 chr5 66554366 66554717 -136530815 + L2 LINE L2 2470 2859 -455 1124 120 0 0 chr5 66554719 66554869 -136530663 - AluSx SINE Alu -14 296 147 535 103 167 0 chr5 66554869 66554947 -136530585 - AluSx SINE Alu -220 92 2 984 294 89 44 chr5 66554951 66555387 -136530145 + L2 LINE L2 2858 3313 0 464 184 120 22 chr5 66558641 66558861 -136526671 + L1MC5 LINE L1 7607 7917 -44 358 218 12 123 chr5 66559029 66559199 -136526333 + L1ME4a LINE L1 5967 6117 -4 745 234 107 41 chr5 66559926 66560216 -136525316 - L2 LINE L2 0 3313 3005 186 377 0 0 chr5 66560287 66560356 -136525176 - L2 LINE L2 -510 2804 2736 198 103 0 0 chr5 66560356 66560385 -136525147 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 748 167 6 26 chr5 66560410 66560566 -136524966 - L1MB3 LINE L1 -3 6180 6028 337 277 47 37 chr5 66560566 66560785 -136524747 - L2 LINE L2 -565 2749 2447 255 315 15 39 chr5 66561849 66561979 -136523553 + MIR SINE MIR 14 140 -122 2227 105 0 3 chr5 66562130 66562424 -136523108 - AluSc SINE Alu -16 293 1 305 291 134 29 chr5 66562931 66563103 -136522429 + MIR3 SINE MIR 16 205 -3 578 210 19 51 chr5 66563171 66563328 -136522204 + LTR16C LTR ERVL 292 443 -48 784 267 54 17 chr5 66563394 66563634 -136521898 + MIR SINE MIR 13 261 -1 2482 54 0 14 chr5 66563906 66564203 -136521329 - AluY SINE Alu -18 293 1 736 228 0 0 chr5 66564280 66564403 -136521129 + FLAM_A SINE Alu 1 123 -19 21 0 0 0 chr5 66564547 66564568 -136520964 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 66564609 66564631 -136520901 + AT_rich Low_complexity Low_complexity 1 22 0 1970 150 3 0 chr5 66564667 66564967 -136520565 + AluJb SINE Alu 1 301 -11 201 74 0 0 chr5 66565083 66565110 -136520422 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1904 167 0 13 chr5 66565159 66565471 -136520061 - AluJb SINE Alu -4 308 1 281 177 25 38 chr5 66565823 66565902 -136519630 + MER116 DNA Mariner 1 78 -2 526 252 16 0 chr5 66566708 66566835 -136518697 + L2 LINE L2 2731 2859 -455 1124 120 0 0 chr5 66566837 66566987 -136518545 - AluSx SINE Alu -14 296 147 535 103 167 0 chr5 66566987 66567065 -136518467 - AluSx SINE Alu -220 92 2 587 312 5 20 chr5 66567069 66567271 -136518261 + L2 LINE L2 2858 3056 -257 302 284 82 53 chr5 66568164 66568372 -136517160 - L1MC/D LINE L1 -2331 5477 5264 1480 201 0 3 chr5 66569678 66569966 -136515566 - AluSc SINE Alu -18 291 5 3215 133 49 37 chr5 66570265 66570647 -136514885 + Tigger2 DNA MER2_type 2141 2534 -184 2234 104 0 22 chr5 66570647 66570964 -136514568 + AluSx SINE Alu 1 310 -2 3215 133 49 37 chr5 66570964 66571152 -136514380 + Tigger2 DNA MER2_type 2534 2718 0 2481 241 80 30 chr5 66571183 66572025 -136513507 - L1MC/D LINE L1 -1311 4835 3952 1219 52 7 13 chr5 66572042 66572196 -136513336 - L1PA6 LINE L1 -6 6148 5996 11985 94 8 17 chr5 66572204 66574141 -136511391 - L1PA6 LINE L1 -632 5522 3612 2348 95 3 0 chr5 66575300 66575605 -136509927 - AluSx SINE Alu -6 306 1 273 320 62 10 chr5 66575876 66575973 -136509559 + MIR SINE MIR 19 120 -88 320 291 55 0 chr5 66575993 66576103 -136509429 - MER117 DNA MER1_type -7 190 75 740 165 45 0 chr5 66576463 66576596 -136508936 + MER47A DNA MER2_type 2 140 -226 7349 42 10 32 chr5 66577684 66579693 -136505839 + L1PA4 LINE L1 4320 6155 0 1316 90 0 0 chr5 66579705 66579883 -136505649 + AluY SINE Alu 120 297 -14 256 225 56 11 chr5 66580336 66580425 -136505107 + MARNA DNA Mariner 202 294 -292 296 358 102 21 chr5 66580581 66580768 -136504764 - MIR SINE MIR -2 260 59 633 256 26 62 chr5 66581171 66581398 -136504134 + LTR16A1 LTR ERVL 225 443 -14 486 261 67 0 chr5 66581603 66581737 -136503795 + MIR SINE MIR 76 218 -44 183 42 0 0 chr5 66582614 66582638 -136502894 + (TC)n Simple_repeat Simple_repeat 1 24 0 3253 162 44 20 chr5 66583992 66584580 -136500952 - ERVL LTR ERVL -1286 4478 3877 1955 193 28 16 chr5 66584579 66585196 -136500336 - ERVL LTR ERVL -2026 3738 3036 * 1014 283 86 4 chr5 66585301 66585792 -136499740 + L1MC4a LINE L1 5293 5881 -1927 709 306 11 62 chr5 66585895 66586170 -136499362 - ERVL LTR ERVL -1912 3084 2824 1076 296 93 42 chr5 66586290 66586905 -136498627 - ERVL LTR ERVL -3303 2461 1816 419 258 50 90 chr5 66588387 66588787 -136496745 - L2 LINE L2 -410 2904 2521 2096 106 0 20 chr5 66588788 66588955 -136496577 - AluSx SINE Alu -13 299 139 2267 77 7 7 chr5 66588955 66589255 -136496277 - AluSq SINE Alu -13 300 1 2096 106 0 20 chr5 66589255 66589390 -136496142 - AluSx SINE Alu -173 139 3 229 279 107 57 chr5 66589483 66589605 -136495927 - MIR SINE MIR -12 250 123 2097 129 0 0 chr5 66589897 66590199 -136495333 + AluSx SINE Alu 1 302 -10 2127 103 3 3 chr5 66590974 66591274 -136494258 - AluSx SINE Alu -12 300 1 219 340 21 50 chr5 66591288 66591429 -136494103 + L2 LINE L2 1656 1792 -1522 1125 238 73 65 chr5 66591430 66591620 -136493912 - L1MEc LINE L1 -4554 1830 1643 2092 99 0 20 chr5 66591620 66591922 -136493610 - AluSx SINE Alu -16 296 1 1125 238 73 65 chr5 66591922 66592351 -136493181 - L1MEc LINE L1 -4741 1643 1219 417 20 0 0 chr5 66592351 66592401 -136493131 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 6918 43 17 37 chr5 66592401 66594063 -136491469 - SVA Other Other -683 1363 7 1125 238 73 65 chr5 66594063 66594199 -136491333 - L1MEc LINE L1 -5164 1220 1063 1786 126 66 30 chr5 66594199 66594336 -136491196 + AluSx SINE Alu 1 132 -180 2100 103 3 13 chr5 66594336 66594647 -136490885 + AluSg SINE Alu 1 308 -2 1786 126 66 30 chr5 66594647 66594810 -136490722 + AluSx SINE Alu 132 312 0 2108 113 0 3 chr5 66594810 66595111 -136490421 + AluSx SINE Alu 1 300 -12 2261 88 3 0 chr5 66595126 66595422 -136490110 - AluSp SINE Alu -16 297 1 656 147 0 0 chr5 66595429 66595538 -136489994 - AluSg/x SINE Alu 0 312 204 3654 230 42 19 chr5 66595576 66595795 -136489737 - L1MEc LINE L1 -5424 1139 927 2207 100 7 0 chr5 66595795 66596096 -136489436 - AluSq SINE Alu -10 303 1 3654 230 42 19 chr5 66596096 66596820 -136488712 - L1MEc LINE L1 -5636 927 174 932 224 4 21 chr5 66596842 66597079 -136488453 + L1MA4 LINE L1 6068 6300 0 280 332 8 38 chr5 66597669 66597826 -136487706 + MIR SINE MIR 30 180 -71 2053 112 0 7 chr5 66598047 66598361 -136487171 - AluSx SINE Alu 0 312 1 2056 120 7 0 chr5 66599364 66599656 -136485876 - AluSq SINE Alu -19 294 1 1894 150 3 0 chr5 66600105 66600399 -136485133 - AluSx SINE Alu -17 295 1 14400 109 23 85 chr5 66600591 66600917 -136484615 - Tigger1 DNA MER2_type 0 2418 2073 1694 160 17 14 chr5 66600917 66601205 -136484327 - AluJb SINE Alu -23 289 1 14400 109 23 85 chr5 66601205 66601272 -136484260 - Tigger1 DNA MER2_type -345 2073 2003 2107 125 3 10 chr5 66601272 66601585 -136483947 - AluSx SINE Alu -1 311 1 14400 109 23 85 chr5 66601585 66602525 -136483007 - Tigger1 DNA MER2_type -415 2003 1007 1629 157 43 0 chr5 66602525 66602806 -136482726 + AluJb SINE Alu 9 301 -11 14400 109 23 85 chr5 66602806 66604047 -136481485 - Tigger1 DNA MER2_type -1411 1007 1 275 191 16 0 chr5 66604946 66605009 -136480523 + CT-rich Low_complexity Low_complexity 1 64 0 604 135 10 39 chr5 66605144 66605233 -136480299 - AluJo SINE Alu -92 220 133 2047 89 24 7 chr5 66605233 66605524 -136480008 - AluSg SINE Alu -3 307 12 604 135 10 39 chr5 66605524 66605538 -136479994 - AluJo SINE Alu -179 133 120 1733 162 0 23 chr5 66605766 66606068 -136479464 + AluJb SINE Alu 1 295 -17 425 297 55 21 chr5 66606496 66606641 -136478891 - MIR SINE MIR -112 150 1 2432 53 20 0 chr5 66607514 66607817 -136477715 - AluY SINE Alu -2 309 1 1927 119 27 7 chr5 66607817 66608110 -136477422 - AluSx SINE Alu -13 299 1 1972 127 0 3 chr5 66608139 66608423 -136477109 - AluSx SINE Alu -29 283 1 1142 216 81 72 chr5 66608444 66608613 -136476919 - L1ME3A LINE L1 -9 6169 6003 1890 148 0 0 chr5 66608613 66608911 -136476621 + AluSx SINE Alu 13 310 -2 1142 216 81 72 chr5 66608911 66609162 -136476370 - L1ME3A LINE L1 -175 6003 5785 2122 107 0 7 chr5 66609667 66609965 -136475567 + AluSx SINE Alu 1 296 -16 2143 89 3 10 chr5 66611265 66611568 -136473964 + AluSq SINE Alu 1 301 -12 2078 121 0 3 chr5 66611665 66611962 -136473570 - AluSx SINE Alu -16 296 1 514 192 20 10 chr5 66612248 66612347 -136473185 - MIR SINE MIR -112 150 51 243 235 0 59 chr5 66612407 66612475 -136473057 - MIR SINE MIR -16 246 183 1718 154 0 17 chr5 66612501 66612799 -136472733 + AluJb SINE Alu 6 298 -14 540 226 136 32 chr5 66613018 66613173 -136472359 + AluJb SINE Alu 137 307 -5 1618 152 34 24 chr5 66613431 66613727 -136471805 - AluSq SINE Alu -14 299 1 2049 103 10 0 chr5 66614004 66614294 -136471238 - AluSx SINE Alu -18 294 2 1515 155 40 37 chr5 66614500 66614797 -136470735 - AluJb SINE Alu -14 298 1 2554 29 0 13 chr5 66614833 66615141 -136470391 + AluY SINE Alu 1 304 -7 1914 112 0 3 chr5 66616739 66617046 -136468486 - AluSx SINE Alu 0 306 1 2127 65 0 4 chr5 66617067 66617346 -136468186 - AluY SINE Alu -2 309 32 278 350 64 35 chr5 66617526 66617729 -136467803 - MIR SINE MIR -6 256 48 2186 88 7 0 chr5 66618120 66618414 -136467118 - AluSg SINE Alu -14 296 1 2124 98 0 3 chr5 66618498 66618793 -136466739 - AluSg SINE Alu -14 296 3 1742 167 7 7 chr5 66618795 66619095 -136466437 - AluJo SINE Alu -12 300 1 385 130 119 33 chr5 66619105 66619197 -136466335 - AluYb8 SINE Alu -3 305 243 2129 110 3 3 chr5 66619257 66619556 -136465976 + AluSx SINE Alu 2 300 -12 187 229 0 0 chr5 66619895 66619930 -136465602 - MIR SINE MIR -143 65 31 231 313 0 31 chr5 66620514 66620578 -136464954 + MIR SINE MIR 21 82 -126 1879 145 0 3 chr5 66620660 66620950 -136464582 + AluJb SINE Alu 1 289 -23 1771 154 11 0 chr5 66621676 66621961 -136463571 - AluJo SINE Alu -24 288 1 213 346 74 0 chr5 66622396 66622477 -136463055 + L2 LINE L2 3168 3254 -18 2531 156 139 0 chr5 66623213 66623718 -136461814 - MER90 LTR ERV1 0 575 1 26 0 0 0 chr5 66623959 66623985 -136461547 + AT_rich Low_complexity Low_complexity 1 26 0 1737 262 135 18 chr5 66623993 66624960 -136460572 - L2 LINE L2 0 3313 2224 1054 305 102 20 chr5 66625046 66625535 -136459997 - L2 LINE L2 -1830 1484 956 2139 108 0 3 chr5 66625549 66625844 -136459688 - AluSq SINE Alu -17 296 3 2265 91 0 0 chr5 66625908 66626204 -136459328 + AluSg SINE Alu 1 296 -14 2030 127 0 13 chr5 66626310 66626624 -136458908 - AluJb SINE Alu -2 310 1 1495 186 17 14 chr5 66626880 66627171 -136458361 + AluJo SINE Alu 1 292 -20 2186 101 10 7 chr5 66629097 66629405 -136456127 + AluSx SINE Alu 2 310 -2 25 0 0 0 chr5 66630310 66630335 -136455197 + AT_rich Low_complexity Low_complexity 1 25 0 1970 102 0 37 chr5 66631533 66631827 -136453705 - AluSx SINE Alu -16 296 14 426 335 40 6 chr5 66632904 66633080 -136452452 - MIR3 SINE MIR -11 197 16 783 181 0 15 chr5 66633084 66633217 -136452315 - FLAM_A SINE Alu -2 131 1 566 286 32 22 chr5 66633351 66633536 -136451996 - L2 LINE L2 -11 3302 3116 2451 42 3 45 chr5 66633537 66633848 -136451684 - AluY SINE Alu -13 298 1 851 204 87 24 chr5 66633864 66634070 -136451462 - MIR SINE MIR -2 260 42 2083 77 19 4 chr5 66636273 66636533 -136448999 + AluY SINE Alu 1 264 -47 637 268 105 38 chr5 66636533 66636925 -136448607 - L2 LINE L2 -854 2460 2043 1029 172 0 0 chr5 66636932 66637095 -136448437 + FRAM SINE Alu 12 174 -2 496 276 76 0 chr5 66637102 66637287 -136448245 - L2 LINE L2 -1279 2035 1837 1783 169 3 10 chr5 66637424 66637714 -136447818 - AluJo SINE Alu -24 288 1 305 250 53 0 chr5 66637786 66637862 -136447670 - MIR SINE MIR -74 134 55 228 267 48 67 chr5 66637899 66638004 -136447528 + L2 LINE L2 3169 3271 -42 1971 109 0 4 chr5 66638632 66638899 -136446633 - AluY SINE Alu -6 305 40 280 376 45 11 chr5 66639207 66639385 -136446147 - MIR SINE MIR -59 203 20 1731 148 12 70 chr5 66639889 66640065 -136445467 - AluJo SINE Alu -1 311 161 1945 126 28 3 chr5 66640065 66640351 -136445181 - AluSx SINE Alu -15 297 5 1731 148 12 70 chr5 66640351 66640504 -136445028 - AluJo SINE Alu -151 161 1 284 237 215 60 chr5 66640723 66640957 -136444575 - L1ME4a LINE L1 0 6121 5824 1890 157 3 0 chr5 66640957 66641256 -136444276 - AluJo SINE Alu -12 300 1 284 237 215 60 chr5 66641256 66641337 -136444195 - L1ME4a LINE L1 -297 5824 5757 24 53 0 0 chr5 66641970 66642008 -136443524 + AT_rich Low_complexity Low_complexity 1 38 0 180 296 157 19 chr5 66644098 66644206 -136441326 + L2 LINE L2 3137 3259 -13 21 36 0 0 chr5 66646432 66646460 -136439072 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 66647647 66647669 -136437863 + AT_rich Low_complexity Low_complexity 1 22 0 195 257 99 20 chr5 66647714 66647815 -136437717 - MIR3 SINE MIR -22 186 78 23 0 0 0 chr5 66648147 66648170 -136437362 + AT_rich Low_complexity Low_complexity 1 23 0 2173 95 44 0 chr5 66648568 66648864 -136436668 + AluSg SINE Alu 1 309 -1 2387 60 0 41 chr5 66649557 66649871 -136435661 + AluY SINE Alu 1 301 -10 563 263 31 50 chr5 66649975 66650135 -136435397 + MIR SINE MIR 25 181 -81 220 216 233 43 chr5 66650480 66650596 -136434936 - MIR3 SINE MIR -51 157 20 336 301 68 20 chr5 66650683 66650829 -136434703 - L1ME4a LINE L1 -396 5774 5622 37 23 0 0 chr5 66653771 66653815 -136431717 + AT_rich Low_complexity Low_complexity 1 44 0 2072 110 28 3 chr5 66654816 66655106 -136430426 - AluSp SINE Alu -16 297 1 2398 77 20 0 chr5 66655110 66655407 -136430125 - AluY SINE Alu -8 303 1 21 71 0 0 chr5 66655496 66655538 -136429994 + AT_rich Low_complexity Low_complexity 1 42 0 277 284 25 0 chr5 66656307 66656388 -136429144 - L1MC4a LINE L1 -1911 5897 5815 428 247 18 38 chr5 66657090 66657261 -136428271 - MIR SINE MIR 0 262 48 21 36 0 0 chr5 66657593 66657621 -136427911 + AT_rich Low_complexity Low_complexity 1 28 0 1646 274 139 19 chr5 66658818 66659575 -136425957 - L1MC4a LINE L1 -598 5582 5268 311 299 77 26 chr5 66659718 66659912 -136425620 - L1MC4a LINE L1 -1659 4487 4284 1804 159 0 32 chr5 66660236 66660544 -136424988 + AluJo SINE Alu 1 298 -14 198 85 43 21 chr5 66661101 66661148 -136424384 + (TA)n Simple_repeat Simple_repeat 1 48 0 2242 112 0 19 chr5 66661233 66661545 -136423987 + AluSx SINE Alu 1 306 -6 1667 185 0 17 chr5 66661694 66661981 -136423551 - AluJo SINE Alu -30 282 1 1133 280 71 29 chr5 66662108 66662467 -136423065 - HAL1b LINE L1 -566 782 399 2248 108 0 0 chr5 66662467 66662762 -136422770 - AluSx SINE Alu -17 295 1 1133 280 71 29 chr5 66662762 66662855 -136422677 - HAL1b LINE L1 -949 399 311 23 0 0 0 chr5 66662916 66662939 -136422593 + AT_rich Low_complexity Low_complexity 1 23 0 2408 81 0 7 chr5 66663030 66663328 -136422204 - AluSc SINE Alu -13 296 1 184 176 59 39 chr5 66663799 66663850 -136421682 + L3 LINE CR1 1268 1319 -258 518 300 57 22 chr5 66664572 66664703 -136420829 - MIR SINE MIR -15 247 103 2014 137 10 0 chr5 66664703 66664996 -136420536 + AluSg1 SINE Alu 1 296 -13 518 300 57 22 chr5 66664996 66665091 -136420441 - MIR SINE MIR -159 103 13 1000 144 0 86 chr5 66665241 66665428 -136420104 + FAM SINE Alu 1 171 -4 2105 87 70 0 chr5 66667604 66667891 -136417641 - AluSx SINE Alu -5 307 1 2306 110 0 0 chr5 66668486 66668785 -136416747 - AluSg SINE Alu -11 299 1 2287 102 0 0 chr5 66669011 66669304 -136416228 - AluSc SINE Alu -16 293 1 1916 161 3 0 chr5 66669476 66669781 -136415751 - AluJb SINE Alu -6 306 1 315 0 0 0 chr5 66669793 66669828 -136415704 + (TG)n Simple_repeat Simple_repeat 2 36 0 1632 196 0 7 chr5 66669828 66670109 -136415423 - AluJb SINE Alu -28 284 6 42 0 0 0 chr5 66670114 66670156 -136415376 + AT_rich Low_complexity Low_complexity 1 42 0 854 130 0 0 chr5 66670158 66670273 -136415259 - FLAM_C SINE Alu -28 115 1 840 267 58 64 chr5 66671299 66671546 -136413986 - L1MC5 LINE L1 -36 7925 7678 2237 88 3 14 chr5 66671546 66671841 -136413691 - AluSg SINE Alu -18 292 1 840 267 58 64 chr5 66671841 66672159 -136413373 - L1MC5 LINE L1 -283 7678 7363 196 200 0 0 chr5 66673650 66673690 -136411842 - L2 LINE L2 -4 3268 3229 1514 172 7 32 chr5 66674414 66674693 -136410839 - AluJo SINE Alu -1 311 40 2109 129 0 16 chr5 66674700 66675010 -136410522 - AluSq SINE Alu -3 310 6 854 138 0 8 chr5 66675020 66675150 -136410382 - FLAM_C SINE Alu -3 140 12 2164 127 13 0 chr5 66676133 66676441 -136409091 + AluSx SINE Alu 1 312 0 826 286 156 26 chr5 66676508 66677240 -136408292 - L1ME4a LINE L1 -16 6105 5277 346 286 12 0 chr5 66677297 66677381 -136408151 + L2 LINE L2 3187 3271 -1 2140 98 14 20 chr5 66677883 66678179 -136407353 - AluSc SINE Alu -15 294 1 2042 148 0 0 chr5 66678289 66678592 -136406940 - AluSx SINE Alu -9 303 1 1041 178 22 67 chr5 66678641 66678674 -136406858 + AluJo SINE Alu 87 120 -192 2445 64 0 0 chr5 66678674 66678969 -136406563 - AluY SINE Alu -16 295 1 1041 178 22 67 chr5 66678969 66679160 -136406372 + AluJo SINE Alu 120 301 -11 1515 170 4 0 chr5 66679820 66680055 -136405477 + MER46A DNA MER2_type 1 236 0 685 327 77 41 chr5 66680301 66681059 -136404473 + HAL1b LINE L1 61 845 -503 1601 179 131 148 chr5 66681219 66682037 -136403495 + L1MC5 LINE L1 6728 7531 -430 317 221 31 79 chr5 66682133 66682260 -136403272 + L1ME3 LINE L1 5961 6081 -81 2386 121 11 0 chr5 66682378 66682733 -136402799 + L1MA6 LINE L1 5602 5960 -340 933 102 36 15 chr5 66682733 66682870 -136402662 - MSTB LTR MaLR 0 426 287 542 139 111 19 chr5 66682885 66682984 -136402548 + FRAM SINE Alu 53 164 -148 180 0 0 0 chr5 66682984 66683004 -136402528 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 7176 185 12 15 chr5 66683052 66684357 -136401175 - MSTB-int LTR MaLR -349 1302 1 2540 150 30 7 chr5 66684365 66684771 -136400761 - MSTB LTR MaLR -11 415 1 2082 135 25 3 chr5 66684775 66685101 -136400431 + L1MA6 LINE L1 5968 6300 0 984 205 14 14 chr5 66685124 66685334 -136400198 + L1M4 LINE L1 4006 4215 -1931 2391 86 0 10 chr5 66685355 66685668 -136399864 - AluY SINE Alu -1 310 1 1660 156 50 7 chr5 66685783 66686065 -136399467 - AluJo SINE Alu -12 300 7 828 323 42 26 chr5 66686146 66686530 -136399002 + L1MB4 LINE L1 395 784 -5758 249 118 0 59 chr5 66686561 66686629 -136398903 + (TCCC)n Simple_repeat Simple_repeat 2 65 0 1898 177 0 3 chr5 66686629 66686928 -136398604 - AluJo SINE Alu -13 299 2 359 204 22 30 chr5 66686937 66687074 -136398458 + CT-rich Low_complexity Low_complexity 1 138 -674 2370 104 0 0 chr5 66687074 66687383 -136398149 - AluSc SINE Alu 0 309 1 1238 211 61 21 chr5 66687393 66687673 -136397859 - AluJo SINE Alu -21 291 1 359 204 22 30 chr5 66687673 66687756 -136397776 + CT-rich Low_complexity Low_complexity 147 812 0 1372 219 44 31 chr5 66687828 66687862 -136397670 + L1MB4 LINE L1 816 848 -5694 2121 114 24 7 chr5 66687862 66688160 -136397372 + AluSx SINE Alu 1 303 -9 1372 219 44 31 chr5 66688160 66688485 -136397047 + L1MB4 LINE L1 848 1180 -5362 1513 141 5 0 chr5 66688501 66688721 -136396811 + AluSq SINE Alu 1 221 -92 3352 245 47 22 chr5 66688723 66689988 -136395544 + L1MB4 LINE L1 1353 2797 -4028 1499 138 5 0 chr5 66689988 66690206 -136395326 + AluSg/x SINE Alu 81 299 -11 3352 245 47 22 chr5 66690206 66690366 -136395166 + L1MB4 LINE L1 2797 2952 -3873 375 221 63 0 chr5 66690392 66690487 -136395045 + L1MB4 LINE L1 3183 3283 -3361 * 5355 134 20 26 chr5 66690477 66691473 -136394059 + L1PB3 LINE L1 4677 5640 -516 2068 127 3 13 chr5 66691473 66691772 -136393760 - AluSx SINE Alu -16 296 1 5355 134 20 26 chr5 66691772 66692280 -136393252 + L1PB3 LINE L1 5640 6150 -6 1529 201 39 3 chr5 66692280 66692563 -136392969 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr5 66692595 66692617 -136392915 + AT_rich Low_complexity Low_complexity 1 22 0 203 240 20 0 chr5 66692620 66692670 -136392862 + (CA)n Simple_repeat Simple_repeat 2 52 0 4618 213 85 29 chr5 66692705 66692800 -136392732 + L1MB4 LINE L1 3267 3355 -3289 2313 104 3 0 chr5 66692800 66693097 -136392435 - AluSp SINE Alu -15 298 1 4618 213 85 29 chr5 66693097 66693112 -136392420 + L1MB4 LINE L1 3355 3368 -3276 2397 95 0 3 chr5 66693112 66693416 -136392116 - AluSx SINE Alu -9 303 1 4618 213 85 29 chr5 66693416 66694661 -136390871 + L1MB4 LINE L1 3368 4699 -1945 14318 116 38 5 chr5 66694662 66696771 -136388761 - Tigger1 DNA MER2_type -2 2416 239 1905 144 169 11 chr5 66696772 66697120 -136388412 - MER4A LTR ERV1 -1 663 261 559 146 31 10 chr5 66697120 66697216 -136388316 - MER4A LTR ERV1 -566 98 1 * 1624 137 0 8 chr5 66697216 66697460 -136388072 - Tigger1 DNA MER2_type -2176 242 1 5209 155 20 74 chr5 66697460 66698502 -136387030 + L1MB4 LINE L1 4697 5794 -884 1794 153 42 11 chr5 66698502 66698789 -136386743 + AluJb SINE Alu 1 296 -16 5209 155 20 74 chr5 66698789 66699096 -136386436 + L1MB4 LINE L1 5794 6116 -562 2133 134 0 3 chr5 66699096 66699402 -136386130 + AluSx SINE Alu 1 305 -7 5209 155 20 74 chr5 66699402 66700108 -136385424 + L1MB4 LINE L1 6116 6642 -36 379 207 201 30 chr5 66700203 66700367 -136385165 + L1MC/D LINE L1 3267 3458 -2688 2288 107 0 0 chr5 66700498 66700796 -136384736 + AluSx SINE Alu 3 300 -12 648 291 80 12 chr5 66700824 66701251 -136384281 + L1MC/D LINE L1 5215 5687 -771 493 281 159 9 chr5 66701264 66701534 -136383998 + L2 LINE L2 2693 2998 -274 559 187 0 15 chr5 66701564 66701698 -136383834 + CT-rich Low_complexity Low_complexity 1 132 0 1856 144 138 6 chr5 66701699 66702054 -136383478 - L1MA4 LINE L1 -15 6285 5884 414 260 62 114 chr5 66702058 66702331 -136383201 + L2 LINE L2 3055 3313 0 544 194 206 12 chr5 66703296 66703456 -136382076 - MIR SINE MIR -55 207 17 42601 57 6 8 chr5 66704578 66710750 -136374782 - L1PA5 LINE L1 -2 6152 4 2360 61 10 10 chr5 66713208 66713525 -136372007 + AluY SINE Alu 1 317 0 344 292 29 41 chr5 66713779 66713950 -136371582 + MIR SINE MIR 12 180 -82 275 308 44 0 chr5 66714473 66714564 -136370968 - L2 LINE L2 -21 3292 3198 316 175 35 0 chr5 66717001 66717058 -136368474 - AluJ/FLAM SINE Alu -243 59 1 1140 225 210 89 chr5 66717060 66717799 -136367733 + Charlie8 DNA MER1_type 991 1824 -593 2156 109 6 37 chr5 66717799 66718121 -136367411 - AluSx SINE Alu 0 312 1 1140 225 210 89 chr5 66718121 66718133 -136367399 + Charlie8 DNA MER1_type 1824 1833 -584 424 234 97 8 chr5 66719099 66719223 -136366309 - L2 LINE L2 -17 3296 3162 2465 74 0 0 chr5 66719313 66719610 -136365922 + AluY SINE Alu 1 297 -14 42842 39 23 6 chr5 66719611 66725659 -136359873 + L1PA3 LINE L1 1 6155 0 186 231 154 0 chr5 66725696 66725761 -136359771 - MIR SINE MIR -66 196 122 2153 81 42 14 chr5 66726074 66726357 -136359175 - AluY SINE Alu -20 291 1 966 172 0 0 chr5 66726471 66726640 -136358892 - AluSg/x SINE Alu -7 305 137 2117 84 7 0 chr5 66727120 66727394 -136358138 + AluSp SINE Alu 1 276 -37 354 58 58 0 chr5 66727739 66727791 -136357741 + MADE1 DNA Mariner 1 55 -25 225 0 0 0 chr5 66729313 66729338 -136356194 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 206 316 38 0 chr5 66729463 66729542 -136355990 - L2 LINE L2 -12 3301 3220 1907 126 0 66 chr5 66729583 66729916 -136355616 + AluSx SINE Alu 1 311 -1 305 331 17 41 chr5 66730159 66730331 -136355201 + HAL1b LINE L1 360 527 -821 326 286 43 7 chr5 66730790 66730930 -136354602 + HAL1b LINE L1 1191 1335 -13 1645 174 30 20 chr5 66731020 66731319 -136354213 - AluJb SINE Alu -10 302 1 1560 127 45 31 chr5 66731420 66732529 -136353003 + L1MA8 LINE L1 5032 6291 0 2140 129 0 7 chr5 66732619 66732928 -136352604 + AluSx SINE Alu 1 307 -5 264 247 187 13 chr5 66734079 66734159 -136351373 - MARNA DNA Mariner -23 563 498 222 37 0 0 chr5 66734159 66734186 -136351346 + (CATA)n Simple_repeat Simple_repeat 2 28 0 264 247 187 13 chr5 66734186 66734255 -136351277 - MARNA DNA Mariner -88 498 388 387 247 110 7 chr5 66734317 66734471 -136351061 - MARNA DNA Mariner -215 371 202 1369 90 0 0 chr5 66734924 66735102 -136350430 - AluY SINE Alu -14 297 120 42827 48 6 0 chr5 66735114 66741222 -136344310 - L1PA4 LINE L1 0 6155 9 1144 79 0 0 chr5 66741222 66741362 -136344170 - AluY SINE Alu -171 140 1 1973 124 22 0 chr5 66741631 66741906 -136343626 - AluSg SINE Alu -27 283 3 324 0 0 0 chr5 66742192 66742228 -136343304 + (CA)n Simple_repeat Simple_repeat 2 37 0 201 274 0 0 chr5 66742622 66742673 -136342859 - L3 LINE CR1 -80 1497 1447 256 233 33 17 chr5 66743339 66743399 -136342133 - MIR SINE MIR -108 100 40 2364 71 10 0 chr5 66743419 66743716 -136341816 + AluY SINE Alu 1 300 -11 1810 177 3 7 chr5 66744237 66744536 -136340996 - AluJo SINE Alu -14 298 1 228 67 0 0 chr5 66745271 66745301 -136340231 + (TA)n Simple_repeat Simple_repeat 1 30 0 2286 115 0 0 chr5 66745644 66745999 -136339533 + AluSx SINE Alu 1 355 0 291 171 86 0 chr5 66746025 66746095 -136339437 + L1ME4a LINE L1 5628 5703 -418 363 258 160 4 chr5 66746171 66746427 -136339105 + L1ME4a LINE L1 5811 6106 -15 644 206 8 0 chr5 66746447 66746573 -136338959 - FLAM_A SINE Alu -7 135 9 1836 224 179 5 chr5 66747970 66748528 -136337004 - L1MC4 LINE L1 -150 7892 7238 1423 189 48 0 chr5 66748576 66748825 -136336707 - AluJb SINE Alu -45 267 7 262 359 8 30 chr5 66748943 66749074 -136336458 + MIR3 SINE MIR 8 135 -73 29 0 0 0 chr5 66749277 66749306 -136336226 + AT_rich Low_complexity Low_complexity 1 29 0 234 176 98 0 chr5 66749360 66749411 -136336121 + L2 LINE L2 3217 3272 0 188 361 42 0 chr5 66749471 66749543 -136335989 + MIR SINE MIR 101 175 -87 232 272 0 0 chr5 66750451 66750532 -136335000 + L1ME LINE L1 5317 5397 -962 691 144 86 0 chr5 66753026 66753165 -136332367 - L1MB3 LINE L1 -19 6164 6014 313 229 57 57 chr5 66753167 66753209 -136332323 + L1ME LINE L1 5601 5642 -479 2524 52 0 3 chr5 66753209 66753514 -136332018 - AluY SINE Alu -7 304 1 313 229 57 57 chr5 66753514 66753593 -136331939 + L1ME LINE L1 5641 5722 -399 389 261 170 46 chr5 66753805 66753958 -136331574 + MER5A DNA MER1_type 12 183 -6 2039 117 7 7 chr5 66754121 66754419 -136331113 + AluSg1 SINE Alu 1 298 -11 202 225 0 0 chr5 66754447 66754487 -136331045 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 283 282 46 53 chr5 66754681 66754812 -136330720 + MIR SINE MIR 89 218 -44 1630 76 9 5 chr5 66755207 66755440 -136330092 - AluSp SINE Alu 0 308 75 2175 86 21 3 chr5 66755449 66755739 -136329793 - AluY SINE Alu -16 295 1 236 222 63 32 chr5 66755786 66755849 -136329683 - L3 LINE CR1 -297 1280 1216 870 290 85 27 chr5 66756137 66756693 -136328839 + L2 LINE L2 2715 3297 -16 237 204 61 0 chr5 66756691 66756740 -136328792 + MIR SINE MIR 211 262 0 * 1196 147 114 0 chr5 66756966 66757177 -136328355 - MER46A DNA MER2_type 0 236 2 22 70 0 0 chr5 66758177 66758220 -136327312 + AT_rich Low_complexity Low_complexity 1 43 0 32 0 0 0 chr5 66759753 66759785 -136325747 + AT_rich Low_complexity Low_complexity 1 32 0 441 342 77 32 chr5 66760640 66761081 -136324451 + L2 LINE L2 1256 1716 -1598 302 205 84 48 chr5 66761241 66761324 -136324208 + L2 LINE L2 3187 3272 0 546 255 21 0 chr5 66763163 66763308 -136322224 - L1MD2 LINE L1 -14 6345 6198 473 83 0 14 chr5 66763842 66763914 -136321618 + (TA)n Simple_repeat Simple_repeat 1 71 0 228 320 199 32 chr5 66764461 66764773 -136320759 + L2 LINE L2 798 1161 -2153 493 212 168 0 chr5 66764787 66764900 -136320632 - MER58A DNA MER1_type 0 224 93 2634 142 16 52 chr5 66764904 66765389 -136320143 - LTR8A LTR ERV1 0 727 260 1003 113 0 0 chr5 66765424 66765557 -136319975 - AluJo SINE Alu -171 141 9 1644 106 11 55 chr5 66765560 66765676 -136319856 - LTR8A LTR ERV1 -464 263 143 2238 98 3 0 chr5 66765676 66766017 -136319515 + AluSq SINE Alu 1 313 0 1644 106 11 55 chr5 66766017 66766175 -136319357 - LTR8A LTR ERV1 -584 143 1 246 250 16 16 chr5 66766194 66766258 -136319274 - MER58A DNA MER1_type -42 65 2 616 301 170 44 chr5 66766330 66766581 -136318951 + L2 LINE L2 1244 1462 -1852 1779 65 13 4 chr5 66766581 66766810 -136318722 - AluSq SINE Alu -10 303 73 616 301 170 44 chr5 66766810 66767329 -136318203 + L2 LINE L2 1462 2111 -1203 569 180 16 55 chr5 66767392 66767520 -136318012 - MER46A DNA MER2_type -2 234 112 476 297 94 14 chr5 66767571 66767783 -136317749 + L2 LINE L2 2235 2463 -851 216 67 0 0 chr5 66767783 66767813 -136317719 + (TA)n Simple_repeat Simple_repeat 2 31 0 3867 125 11 19 chr5 66767860 66768483 -136317049 + Tigger2 DNA MER2_type 598 1215 -1503 216 0 0 0 chr5 66768483 66768507 -136317025 + (A)n Simple_repeat Simple_repeat 1 24 0 3117 125 48 60 chr5 66768518 66768900 -136316632 + Tigger2 DNA MER2_type 2141 2515 -203 2199 96 0 23 chr5 66768900 66769203 -136316329 + AluSx SINE Alu 1 296 -16 3117 125 48 60 chr5 66769203 66769405 -136316127 + Tigger2 DNA MER2_type 2515 2718 0 2340 242 80 30 chr5 66769436 66770278 -136315254 - L1M4 LINE L1 -1311 4835 3952 1137 52 7 13 chr5 66770295 66770449 -136315083 - L1PA6 LINE L1 -6 6148 5996 23695 60 6 1 chr5 66770457 66773710 -136311822 - L1PA6 LINE L1 -632 5522 2257 1040 268 73 26 chr5 66773718 66773740 -136311792 - L1M4 LINE L1 -2186 3960 3940 1577 189 14 10 chr5 66773740 66774037 -136311495 + AluJo SINE Alu 5 302 -10 1040 268 73 26 chr5 66774037 66774436 -136311096 - L1M4 LINE L1 -2206 3940 3519 1383 225 106 34 chr5 66774705 66775149 -136310383 - MLT1D LTR MaLR -29 476 1 29 28 0 0 chr5 66775837 66775873 -136309659 + AT_rich Low_complexity Low_complexity 1 36 0 493 304 82 13 chr5 66776294 66776452 -136309080 - MIR3 SINE MIR -18 190 22 200 344 162 17 chr5 66776481 66776722 -136308810 - L2 LINE L2 -353 2961 2686 280 286 24 40 chr5 66776877 66777003 -136308529 - L2 LINE L2 -956 2358 2235 973 217 128 0 chr5 66777154 66777380 -136308152 - MIR SINE MIR 0 262 8 773 307 51 6 chr5 66777876 66778263 -136307269 + ERVL LTR ERVL 4330 4754 -1010 857 202 104 21 chr5 66778270 66778597 -136306935 + L1MC5 LINE L1 7557 7910 -51 259 289 233 19 chr5 66778610 66778876 -136306656 + ERVL LTR ERVL 5166 5488 -276 21 36 0 0 chr5 66779615 66779643 -136305889 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 66780117 66780152 -136305380 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 66781403 66781431 -136304101 + AT_rich Low_complexity Low_complexity 1 28 0 340 292 168 0 chr5 66781755 66781916 -136303616 + MIR SINE MIR 67 254 -8 518 330 234 17 chr5 66781949 66782304 -136303228 - L2 LINE L2 -4 3268 2837 571 197 115 32 chr5 66782803 66783021 -136302511 + MER114 LTR ERV 148 383 -265 322 156 69 139 chr5 66783240 66783413 -136302119 - L1MC5 LINE L1 -435 7526 7366 386 323 21 16 chr5 66783553 66783745 -136301787 - HAL1b LINE L1 -715 633 441 347 333 59 38 chr5 66783792 66784097 -136301435 - L1MEd LINE L1 -1195 1295 1004 21 0 0 0 chr5 66784397 66784418 -136301114 + AT_rich Low_complexity Low_complexity 1 21 0 2322 93 0 3 chr5 66785052 66785352 -136300180 - AluSx SINE Alu -13 299 1 21 57 0 0 chr5 66787166 66787201 -136298331 + AT_rich Low_complexity Low_complexity 1 35 0 247 335 51 25 chr5 66787325 66787483 -136298049 - L2 LINE L2 -504 2810 2649 417 311 53 0 chr5 66787530 66787662 -136297870 - MIR SINE MIR -24 238 100 1665 167 43 11 chr5 66788541 66788823 -136296709 + AluJo SINE Alu 1 291 -21 279 345 0 0 chr5 66788969 66789056 -136296476 + MIR SINE MIR 173 259 -3 303 330 80 40 chr5 66789113 66789337 -136296195 + L1ME LINE L1 5388 5620 -501 1951 81 35 15 chr5 66789375 66789511 -136296021 + AluSx SINE Alu 1 133 -179 2053 123 23 3 chr5 66789511 66789813 -136295719 + AluSg SINE Alu 1 308 -2 1951 81 35 15 chr5 66789813 66789936 -136295596 + AluSx SINE Alu 133 265 -47 2069 114 0 42 chr5 66790052 66790360 -136295172 + AluSx SINE Alu 1 295 -17 343 269 9 46 chr5 66790466 66790530 -136295002 - MIR SINE MIR -158 104 44 1843 170 0 16 chr5 66790530 66790836 -136294696 - AluJo SINE Alu -11 301 1 343 269 9 46 chr5 66790836 66790879 -136294653 - MIR SINE MIR -218 44 1 212 311 33 26 chr5 66791421 66791458 -136294074 + GA-rich Low_complexity Low_complexity 3 38 -116 3041 169 32 25 chr5 66791458 66792016 -136293516 + MER68 LTR ERV1 1 562 0 212 311 33 26 chr5 66792016 66792129 -136293403 + GA-rich Low_complexity Low_complexity 38 154 0 2379 100 3 0 chr5 66792435 66792745 -136292787 - AluSx SINE Alu -1 311 1 9948 180 32 10 chr5 66792807 66795994 -136289538 - L1PB1 LINE L1 -1 6866 3618 5288 121 180 8 chr5 66796046 66797162 -136288370 - L1PB1 LINE L1 -5130 1733 2 444 171 0 0 chr5 66797224 66797306 -136288226 + (TA)n Simple_repeat Simple_repeat 2 83 0 245 311 86 11 chr5 66797353 66797559 -136287973 - L1M4 LINE L1 -3166 2980 2746 2574 55 3 0 chr5 66797559 66797869 -136287663 - AluSx SINE Alu -1 311 1 245 311 86 11 chr5 66797869 66797942 -136287590 - L1M4 LINE L1 -3400 2746 2680 1650 118 44 61 chr5 66798694 66798991 -136286541 - AluSx SINE Alu 0 312 21 447 317 201 15 chr5 66799014 66799348 -136286184 - HAL1 LINE L1 -957 1550 1155 231 268 14 0 chr5 66799410 66799481 -136286051 + L1ME1 LINE L1 388 459 -5937 2433 216 95 40 chr5 66799929 66800252 -136285280 + L1ME1 LINE L1 790 1094 -5312 688 186 0 16 chr5 66800252 66800381 -136285151 + FLAM_A SINE Alu 5 131 -2 2433 216 95 40 chr5 66800381 66801410 -136284122 + L1ME1 LINE L1 1094 2337 -4069 1912 227 97 40 chr5 66801405 66802027 -136283505 + L1ME1 LINE L1 5765 6421 -5 * 22 0 0 0 chr5 66802184 66802206 -136283326 + AT_rich Low_complexity Low_complexity 1 22 0 1756 189 0 0 chr5 66802210 66802496 -136283036 + AluJb SINE Alu 7 292 -20 22 35 0 0 chr5 66802496 66802525 -136283007 + AT_rich Low_complexity Low_complexity 1 29 0 2789 157 52 40 chr5 66802538 66803169 -136282363 + Tigger6a DNA MER2_type 2 695 -388 414 303 113 55 chr5 66803176 66803628 -136281904 + L2 LINE L2 2260 2737 -577 271 231 0 88 chr5 66803718 66803809 -136281723 + L2 LINE L2 3230 3312 -1 22 35 0 0 chr5 66803941 66803970 -136281562 + GC_rich Low_complexity Low_complexity 1 29 0 245 372 23 8 chr5 66805403 66805532 -136280000 + MIR SINE MIR 17 147 -61 3709 184 53 23 chr5 66805861 66806684 -136278848 - L1ME1 LINE L1 -1 6165 5318 2416 84 0 0 chr5 66806699 66806998 -136278534 + AluSx SINE Alu 1 299 -13 2754 196 39 58 chr5 66807187 66807434 -136278098 - L1ME1 LINE L1 -4 6162 5912 2019 120 24 3 chr5 66807434 66807726 -136277806 - AluSg SINE Alu -12 298 1 2754 196 39 58 chr5 66807726 66808222 -136277310 - L1ME1 LINE L1 -254 5912 5433 1985 218 50 31 chr5 66808279 66808797 -136276735 - L1ME1 LINE L1 -25 6141 5614 1598 249 23 35 chr5 66808972 66809402 -136276130 - L1ME1 LINE L1 -1668 4478 4055 2036 122 7 17 chr5 66809402 66809698 -136275834 - AluSp SINE Alu -20 293 1 1598 249 23 35 chr5 66809698 66809830 -136275702 - L1ME1 LINE L1 -2091 4055 3923 650 147 101 0 chr5 66809914 66810043 -136275489 - L1MC2 LINE L1 -2 6342 6201 2222 122 11 22 chr5 66810050 66810234 -136275298 - L1MC2 LINE L1 -338 6006 5826 2061 139 3 3 chr5 66810234 66810543 -136274989 - AluSx SINE Alu -3 309 1 2222 122 11 22 chr5 66810543 66810719 -136274813 - L1MC2 LINE L1 -518 5826 5650 3351 242 54 36 chr5 66810719 66812109 -136273423 - L1ME1 LINE L1 -2293 3853 2439 1204 291 45 16 chr5 66812107 66812663 -136272869 + L1MEc LINE L1 1123 1694 -4702 * 589 281 99 0 chr5 66812665 66812857 -136272675 - HAL1 LINE L1 -708 1799 1589 577 113 0 0 chr5 66813877 66813957 -136271575 - AluS SINE Alu -233 80 1 7131 181 36 18 chr5 66813962 66815128 -136270404 - L1M3 LINE L1 -679 5489 4283 1889 140 49 0 chr5 66815128 66815413 -136270119 - AluJb SINE Alu -13 299 1 7131 181 36 18 chr5 66815413 66815874 -136269658 - L1M3 LINE L1 -1885 4283 3832 24 32 0 0 chr5 66816070 66816101 -136269431 + AT_rich Low_complexity Low_complexity 1 31 0 684 245 86 23 chr5 66816358 66816660 -136268872 - L1MC5 LINE L1 -32 7929 7609 180 300 67 0 chr5 66817726 66817786 -136267746 - MIR SINE MIR -78 184 121 21 0 0 0 chr5 66820126 66820147 -136265385 + AT_rich Low_complexity Low_complexity 1 21 0 305 98 0 20 chr5 66820253 66820304 -136265228 + (TGG)n Simple_repeat Simple_repeat 1 50 0 2221 118 0 13 chr5 66820387 66820523 -136265009 + AluSx SINE Alu 1 137 -175 2615 50 0 0 chr5 66820523 66820826 -136264706 + AluY SINE Alu 1 303 -8 2221 118 0 13 chr5 66820826 66820994 -136264538 + AluSx SINE Alu 137 301 -11 800 169 27 27 chr5 66821049 66821197 -136264335 + FRAM SINE Alu 22 169 -7 509 162 22 123 chr5 66821219 66821398 -136264134 - L1MA9 LINE L1 -4 6308 6148 2179 94 0 7 chr5 66821763 66822051 -136263481 + AluSc SINE Alu 7 292 -17 2119 117 0 0 chr5 66822084 66822390 -136263142 - AluSg SINE Alu 0 306 1 925 286 35 40 chr5 66822790 66823161 -136262371 - L2 LINE L2 -1 3312 2944 647 256 6 18 chr5 66823168 66823332 -136262200 - L2 LINE L2 -534 2780 2619 544 167 16 48 chr5 66823341 66823467 -136262065 - L1MC4 LINE L1 0 8042 7921 1536 141 46 13 chr5 66823483 66823658 -136261874 - L1MA8 LINE L1 -3 6288 6097 2137 124 0 3 chr5 66823658 66823957 -136261575 - AluSx SINE Alu -14 298 1 1536 141 46 13 chr5 66823957 66824085 -136261447 - L1MA8 LINE L1 -194 6097 5975 10803 164 34 13 chr5 66824440 66827758 -136257774 - L1MA9 LINE L1 -4 6308 2915 7027 145 24 13 chr5 66827773 66830002 -136255530 - L1MA2 LINE L1 0 6304 4039 3147 42 0 49 chr5 66830342 66830481 -136255051 - L1PA5 LINE L1 -3 6151 6007 2489 46 3 7 chr5 66830481 66830785 -136254747 - AluY SINE Alu -7 304 2 3147 42 0 49 chr5 66830785 66831074 -136254458 - L1PA5 LINE L1 -147 6007 5744 2327 107 0 0 chr5 66831136 66831436 -136254096 - AluSg SINE Alu -10 300 1 1815 171 50 14 chr5 66831466 66831828 -136253704 + THE1C LTR MaLR 1 375 0 210 91 0 0 chr5 66831968 66832001 -136253531 + (T)n Simple_repeat Simple_repeat 1 33 0 396 279 133 0 chr5 66832315 66832473 -136253059 - HAL1b LINE L1 -613 735 557 201 74 0 0 chr5 66832533 66832560 -136252972 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 954 198 11 6 chr5 66833009 66833191 -136252341 - AluJb SINE Alu -23 289 107 1800 198 52 39 chr5 66833191 66833731 -136251801 + MLT2A2 LTR ERVL 2 551 -3 706 125 9 0 chr5 66833733 66833845 -136251687 - AluSq/x SINE Alu -200 113 1 1936 145 25 0 chr5 66833987 66834302 -136251230 - AluSx SINE Alu 0 322 1 1894 232 32 76 chr5 66834484 66835131 -136250401 - L2 LINE L2 -829 2485 1867 22 0 0 0 chr5 66835404 66835426 -136250106 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 66836283 66836315 -136249217 + AT_rich Low_complexity Low_complexity 1 32 0 1607 197 24 3 chr5 66836343 66836632 -136248900 + AluJo SINE Alu 5 299 -13 18115 163 31 21 chr5 66836698 66836749 -136248783 + L1MA3 LINE L1 1 50 -7515 2160 118 7 3 chr5 66836749 66837054 -136248478 + AluSx SINE Alu 1 306 -6 18115 163 31 21 chr5 66837054 66837501 -136248031 + L1MA3 LINE L1 50 491 -7074 2523 122 54 7 chr5 66837501 66837910 -136247622 - MSTA LTR MaLR 0 428 1 18115 163 31 21 chr5 66837910 66839686 -136245846 + L1MA3 LINE L1 491 2323 -5242 1598 181 0 4 chr5 66839686 66839935 -136245597 + AluSx SINE Alu 4 251 -61 18115 163 31 21 chr5 66839935 66840903 -136244629 + L1MA3 LINE L1 2323 3279 -4286 1852 206 32 16 chr5 66840903 66841376 -136244156 + L1MA3 LINE L1 6165 6827 -897 2249 103 5 93 chr5 66841376 66841590 -136243942 - THE1B LTR MaLR 0 364 200 20638 37 3 0 chr5 66841590 66844919 -136240613 - L1PA4 LINE L1 -1 6154 2820 2249 103 5 93 chr5 66844919 66845103 -136240429 - THE1B LTR MaLR -164 200 1 2244 145 27 0 chr5 66845103 66845476 -136240056 + L1MA3 LINE L1 6823 7205 -519 11447 190 52 16 chr5 66845477 66845841 -136239691 + L1PA15 LINE L1 2801 3150 -3015 1984 128 3 26 chr5 66845841 66846153 -136239379 + AluSq SINE Alu 1 305 -8 11447 190 52 16 chr5 66846153 66849110 -136236422 + L1PA15 LINE L1 3150 6162 -3 3215 98 51 0 chr5 66849120 66849631 -136235901 + L1MA3 LINE L1 7188 7724 0 425 181 36 12 chr5 66849712 66849795 -136235737 - AluJo SINE Alu -168 134 50 201 265 54 0 chr5 66850081 66850145 -136235387 - MIR SINE MIR -62 146 89 32 26 0 0 chr5 66850341 66850380 -136235152 + AT_rich Low_complexity Low_complexity 1 39 0 6509 119 31 10 chr5 66850380 66851689 -136233843 - L1MA1 LINE L1 -4 7717 6383 2190 109 35 37 chr5 66851688 66852091 -136233441 - L1MA1 LINE L1 -4390 3175 2774 * 7234 181 104 55 chr5 66852095 66853762 -136231770 - MER52A LTR ERV1 -5 1750 1 9474 173 54 8 chr5 66853763 66856252 -136229280 - L1MA1 LINE L1 -4788 2777 19 23 33 0 0 chr5 66857626 66857656 -136227876 + AT_rich Low_complexity Low_complexity 1 30 0 2716 170 60 14 chr5 66858355 66858926 -136226606 + L1MB5 LINE L1 5578 6174 0 29 28 0 0 chr5 66860868 66860904 -136224628 + AT_rich Low_complexity Low_complexity 1 36 0 1743 153 0 56 chr5 66862839 66863160 -136222372 - AluJo SINE Alu -9 303 1 23 33 0 0 chr5 66864103 66864133 -136221399 + AT_rich Low_complexity Low_complexity 1 30 0 8140 42 1 0 chr5 66864133 66865905 -136219627 - L1PA5 LINE L1 -2 6152 4383 4039 31 0 0 chr5 66866161 66866651 -136218881 - L1PA3 LINE L1 -844 5302 4813 7101 35 0 1 chr5 66866652 66867509 -136218023 + L1PA3 LINE L1 5299 6154 -1 326 267 112 9 chr5 66867716 66867832 -136217700 + MIR SINE MIR 87 214 -48 436 250 0 32 chr5 66868418 66868542 -136216990 + MER103 DNA DNA 10 129 -37 544 343 89 42 chr5 66869091 66869586 -136215946 + L2 LINE L2 2376 2893 -421 1397 249 54 52 chr5 66869861 66870323 -136215209 + MLT1J LTR MaLR 1 463 -48 764 304 50 71 chr5 66870448 66870929 -136214603 + LTR67 LTR ERVL 85 555 -2 267 228 114 163 chr5 66870941 66871064 -136214468 + L2 LINE L2 3140 3256 -16 21 0 0 0 chr5 66871067 66871088 -136214444 + AT_rich Low_complexity Low_complexity 1 21 0 243 352 69 6 chr5 66871111 66871270 -136214262 + L2 LINE L2 1828 1996 -1318 189 0 0 0 chr5 66871287 66871308 -136214224 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 506 296 22 65 chr5 66871351 66871581 -136213951 + L2 LINE L2 2158 2377 -937 30 59 0 0 chr5 66871907 66871958 -136213574 + AT_rich Low_complexity Low_complexity 1 51 0 3201 214 40 53 chr5 66873139 66873954 -136211578 + MER21B LTR ERV1 1 805 -58 2230 108 0 7 chr5 66874480 66874776 -136210756 - AluSx SINE Alu -18 294 1 2229 100 0 3 chr5 66875101 66875390 -136210142 + AluSc SINE Alu 1 288 -21 392 218 26 0 chr5 66876139 66876217 -136209315 + MER2 DNA MER2_type 2 81 -264 2158 183 75 43 chr5 66876716 66876814 -136208718 - MER63 DNA MER1_type 0 1061 968 457 246 0 49 chr5 66876814 66876936 -136208596 + FLAM_A SINE Alu 1 116 -17 2158 183 75 43 chr5 66876936 66876955 -136208577 - MER63 DNA MER1_type -93 968 951 2127 117 0 7 chr5 66876955 66877245 -136208287 - AluSx SINE Alu -20 292 5 2158 183 75 43 chr5 66877245 66877662 -136207870 - MER63 DNA MER1_type -110 951 509 278 350 15 29 chr5 66878163 66878300 -136207232 + MIR3 SINE MIR 38 172 -36 532 246 22 7 chr5 66878421 66878559 -136206973 + MIR SINE MIR 123 262 0 205 316 26 0 chr5 66878563 66878639 -136206893 + CT-rich Low_complexity Low_complexity 5 82 0 21 36 0 0 chr5 66878685 66878713 -136206819 + AT_rich Low_complexity Low_complexity 1 28 0 351 271 15 30 chr5 66878781 66878914 -136206618 + L1MEd LINE L1 11 141 -5978 723 301 42 16 chr5 66878933 66879319 -136206213 - L1MEd LINE L1 -2411 3718 3323 233 290 56 23 chr5 66879520 66879734 -136205798 - L1MEd LINE L1 -3056 3073 2853 243 0 0 0 chr5 66879745 66879772 -136205760 + (TG)n Simple_repeat Simple_repeat 2 28 0 580 167 0 0 chr5 66879793 66879889 -136205643 - FLAM_A SINE Alu -22 120 25 2115 94 7 27 chr5 66879894 66880191 -136205341 - AluSg SINE Alu -19 291 1 2724 176 18 8 chr5 66880298 66880791 -136204741 - MLT1D LTR MaLR -1 504 7 1688 191 76 25 chr5 66881006 66881399 -136204133 - MLT2D LTR ERVL 0 414 2 438 284 58 39 chr5 66881564 66881821 -136203711 - HAL1 LINE L1 -833 1674 1413 2260 94 0 0 chr5 66881856 66882142 -136203390 - AluSx SINE Alu -26 286 1 748 304 90 73 chr5 66882244 66883302 -136202230 - L1MEd LINE L1 -4900 1219 46 195 333 0 0 chr5 66883509 66883554 -136201978 + L2 LINE L2 3223 3267 -5 210 71 0 0 chr5 66883668 66883696 -136201836 + (TAA)n Simple_repeat Simple_repeat 2 29 0 604 276 65 6 chr5 66883721 66883891 -136201641 - MIR SINE MIR -78 184 5 35 54 0 0 chr5 66883973 66884029 -136201503 + AT_rich Low_complexity Low_complexity 1 56 0 400 323 83 83 chr5 66884036 66884470 -136201062 + L2 LINE L2 2835 3268 -4 21 57 0 0 chr5 66885873 66885908 -136199624 + AT_rich Low_complexity Low_complexity 1 35 0 30 45 0 0 chr5 66886239 66886283 -136199249 + AT_rich Low_complexity Low_complexity 1 44 0 735 319 59 40 chr5 66887084 66887407 -136198125 - L2 LINE L2 0 3313 2985 1011 298 50 16 chr5 66887627 66888069 -136197463 - L1MC4a LINE L1 -708 5583 5479 702 142 90 0 chr5 66888362 66888496 -136197036 + L1MC1 LINE L1 6188 6333 0 6556 46 7 6 chr5 66890360 66892026 -136193506 - L1PA7 LINE L1 0 6154 4551 1153 95 6 22 chr5 66892026 66892205 -136193327 - L1P3 LINE L1 -518 5636 5461 * 1821 86 0 0 chr5 66892179 66892434 -136193098 - L1P3 LINE L1 -1572 4574 4320 1465 145 204 0 chr5 66893467 66893756 -136191776 - MER7A DNA MER2_type 0 346 1 297 0 0 0 chr5 66894108 66894141 -136191391 + (TG)n Simple_repeat Simple_repeat 2 34 0 2203 112 3 0 chr5 66894268 66894564 -136190968 - AluSx SINE Alu -15 297 1 261 0 0 0 chr5 66894623 66894652 -136190880 + (T)n Simple_repeat Simple_repeat 1 29 0 27 49 0 0 chr5 66894974 66895015 -136190517 + AT_rich Low_complexity Low_complexity 1 41 0 642 210 24 18 chr5 66895268 66895435 -136190097 - MLT1J2 LTR MaLR -229 221 54 183 286 60 48 chr5 66895502 66895586 -136189946 - L2 LINE L2 -38 3234 3150 649 282 44 41 chr5 66895711 66896176 -136189356 - LTR33 LTR ERVL 0 521 16 351 269 56 9 chr5 66896738 66896846 -136188686 - MER103 DNA DNA -1 165 53 232 316 146 40 chr5 66896984 66897237 -136188295 - L2 LINE L2 -556 2758 2479 354 45 0 0 chr5 66897288 66897332 -136188200 + (GA)n Simple_repeat Simple_repeat 2 45 0 1375 193 183 18 chr5 66899290 66899453 -136186079 + MLT1C LTR MaLR 6 141 -326 324 0 0 0 chr5 66899453 66899489 -136186043 + (CA)n Simple_repeat Simple_repeat 2 37 0 1375 193 183 18 chr5 66899489 66899718 -136185814 + MLT1C LTR MaLR 141 463 -4 22 0 0 0 chr5 66901412 66901434 -136184098 + AT_rich Low_complexity Low_complexity 1 22 0 468 265 121 19 chr5 66901434 66901649 -136183883 + L1MC4a LINE L1 5736 5972 -1836 1863 169 35 13 chr5 66901955 66902139 -136183393 + L1MC1 LINE L1 5784 5963 -370 1980 146 0 0 chr5 66902139 66902440 -136183092 + AluSq SINE Alu 1 301 -12 1863 169 35 13 chr5 66902440 66902628 -136182904 + L1MC1 LINE L1 5963 6164 -169 * 4534 158 48 5 chr5 66902593 66902873 -136182659 - L1MA8 LINE L1 -188 6103 5837 375 78 0 0 chr5 66902873 66902924 -136182608 + (TG)n Simple_repeat Simple_repeat 2 52 0 4534 158 48 5 chr5 66902924 66904217 -136181315 - L1MA8 LINE L1 -454 5837 4463 28 0 0 0 chr5 66904217 66904245 -136181287 + AT_rich Low_complexity Low_complexity 1 28 0 244 199 0 29 chr5 66904251 66904422 -136181110 + A-rich Low_complexity Low_complexity 4 169 0 219 174 0 28 chr5 66904437 66904546 -136180986 + A-rich Low_complexity Low_complexity 4 109 0 23 33 0 0 chr5 66904546 66904576 -136180956 + AT_rich Low_complexity Low_complexity 1 30 0 5250 147 50 20 chr5 66904577 66904705 -136180827 - L1MA8 LINE L1 -1678 4468 4345 726 179 0 15 chr5 66904705 66904839 -136180693 - FLAM_C SINE Alu 0 133 2 5250 147 50 20 chr5 66904839 66905735 -136179797 - L1MA8 LINE L1 -1801 4345 3414 577 248 222 0 chr5 66906404 66906602 -136178930 - MIR SINE MIR -6 256 15 2130 133 45 8 chr5 66908632 66909007 -136176525 - L1MB2 LINE L1 0 6171 5783 279 0 0 0 chr5 66909088 66909119 -136176413 + (CA)n Simple_repeat Simple_repeat 2 32 0 229 64 0 0 chr5 66909134 66909172 -136176360 - L1MB2 LINE L1 -412 5759 5722 1538 120 13 70 chr5 66909199 66909499 -136176033 - L1MB2 LINE L1 -443 5728 5446 21 36 0 0 chr5 66909746 66909774 -136175758 + AT_rich Low_complexity Low_complexity 1 28 0 2451 65 0 0 chr5 66911504 66911810 -136173722 - AluY SINE Alu -4 307 2 983 263 57 39 chr5 66912085 66912523 -136173009 + MLT1J1 LTR MaLR 1 446 0 992 270 75 44 chr5 66912556 66912941 -136172591 - MLT1K LTR MaLR -123 465 69 340 133 67 33 chr5 66913141 66913170 -136172362 - L1MB2 LINE L1 -3 6168 6141 1479 182 8 0 chr5 66913170 66913428 -136172104 + AluJo SINE Alu 49 308 -4 340 133 67 33 chr5 66913428 66913488 -136172044 - L1MB2 LINE L1 -30 6141 6076 187 269 315 0 chr5 66915065 66915173 -136170359 + MIR SINE MIR 110 251 -11 2271 105 0 3 chr5 66915807 66916120 -136169412 + AluSx SINE Alu 1 312 0 327 25 0 0 chr5 66916121 66916161 -136169371 + (TA)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr5 66917139 66917165 -136168367 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 66917195 66917226 -136168306 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 66917611 66917632 -136167900 + AT_rich Low_complexity Low_complexity 1 21 0 403 269 198 35 chr5 66919208 66919405 -136166127 + MIR SINE MIR 20 248 -14 509 294 14 27 chr5 66919576 66919722 -136165810 + Tigger8 DNA MER2_type 24 167 -499 316 306 61 14 chr5 66920429 66920576 -136164956 - L1MC4 LINE L1 -821 7221 7068 324 194 136 0 chr5 66920635 66920738 -136164794 - Charlie1 DNA MER1_type -5 2756 2640 11504 226 32 25 chr5 66920738 66922418 -136163114 + L1M2a LINE L1 1375 3041 -4126 1373 171 43 60 chr5 66922418 66922717 -136162815 + AluJo SINE Alu 1 294 -18 11504 226 32 25 chr5 66922717 66925808 -136159724 + L1M2a LINE L1 3041 5887 -1280 1167 193 97 15 chr5 66925821 66926090 -136159442 + MER2 DNA MER2_type 55 345 0 771 235 36 32 chr5 66926093 66926340 -136159192 + L1MA9 LINE L1 5951 6198 -114 6544 50 6 2 chr5 66926361 66927182 -136158350 - L1PA4 LINE L1 -1 6154 5331 288 241 0 0 chr5 66927131 66927218 -136158314 + L1MA9 LINE L1 6188 6274 -38 * 346 108 36 36 chr5 66927237 66927320 -136158212 - Charlie1 DNA MER1_type -118 2643 2561 287 224 86 59 chr5 66927709 66927861 -136157671 + L1ME4a LINE L1 5936 6091 -30 518 251 89 108 chr5 66928067 66928326 -136157206 + MIR SINE MIR 2 255 -7 297 232 116 0 chr5 66928740 66928835 -136156697 - MER113 DNA MER1_type? -407 114 9 180 111 0 0 chr5 66928979 66929006 -136156526 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 372 77 0 0 chr5 66929795 66929847 -136155685 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr5 66931703 66931724 -136153808 + AT_rich Low_complexity Low_complexity 1 21 0 1967 110 3 21 chr5 66931781 66932103 -136153429 - AluSx SINE Alu 0 317 1 441 238 99 0 chr5 66932642 66932743 -136152789 - MER96 DNA MER1_type? 0 175 65 214 322 100 0 chr5 66932743 66932833 -136152699 + MIR SINE MIR 53 151 -111 248 183 43 140 chr5 66933272 66933365 -136152167 + L2 LINE L2 3222 3305 -8 2154 93 0 17 chr5 66933371 66933508 -136152024 + AluSq SINE Alu 1 139 -174 2381 82 0 10 chr5 66933508 66933812 -136151720 + AluSc SINE Alu 1 301 -8 1292 138 6 128 chr5 66933645 66933964 -136151568 + AluJb SINE Alu 5 307 0 2154 93 0 17 chr5 66933812 66933964 -136151568 + AluSq SINE Alu 139 285 -28 208 0 0 0 chr5 66933964 66933987 -136151545 + (GAAAA)n Simple_repeat Simple_repeat 2 165 0 1669 136 90 37 chr5 66933987 66934310 -136151222 - THE1C LTR MaLR -35 340 1 261 308 15 0 chr5 66934310 66934375 -136151157 - MIR SINE MIR -118 144 79 4671 249 118 15 chr5 66935134 66935273 -136150259 - L2 LINE L2 -95 3218 3095 2325 70 3 13 chr5 66935273 66935575 -136149957 - AluY SINE Alu -12 299 1 4671 249 118 15 chr5 66935575 66937072 -136148460 - L2 LINE L2 -218 3095 1418 400 322 74 20 chr5 66937314 66937516 -136148016 + L2 LINE L2 3101 3313 0 1840 169 3 3 chr5 66937663 66937958 -136147574 + AluSx SINE Alu 4 298 -14 231 298 99 50 chr5 66938550 66938711 -136146821 + MIR3 SINE MIR 37 205 -3 525 212 99 13 chr5 66938774 66938925 -136146607 - L1M4 LINE L1 -2008 4138 3975 * 828 290 46 23 chr5 66938923 66939230 -136146302 - L1MEc LINE L1 -5981 415 102 2058 196 67 88 chr5 66939264 66940504 -136145028 - L1ME1 LINE L1 -285 5881 4666 372 108 31 0 chr5 66940513 66940578 -136144954 + L1MA10 LINE L1 6268 6334 0 1856 224 90 42 chr5 66940597 66941376 -136144156 + Charlie7 DNA MER1_type 413 1302 -1310 734 179 0 8 chr5 66941471 66941594 -136143938 - FLAM_A SINE Alu -7 126 5 4608 121 20 7 chr5 66941618 66942467 -136143065 - L1PA16 LINE L1 0 6166 5255 794 188 0 0 chr5 66942464 66942624 -136142908 - L1PA16 LINE L1 -1114 5032 4873 * 1311 119 12 96 chr5 66942627 66942878 -136142654 - AluSx SINE Alu -82 230 1 1877 242 57 13 chr5 66942878 66943478 -136142054 - L1ME1 LINE L1 -1681 4465 3840 2987 136 6 14 chr5 66943497 66944005 -136141527 - L1MB3 LINE L1 -3 6180 5677 260 250 50 0 chr5 66944005 66944085 -136141447 + L1ME1 LINE L1 2224 2307 -4089 398 217 43 11 chr5 66944118 66944210 -136141322 + L1ME1 LINE L1 2704 2798 -3417 * 4490 239 83 23 chr5 66944205 66945034 -136140498 + L1ME1 LINE L1 3655 4433 -1802 1583 206 0 19 chr5 66945034 66945350 -136140182 + AluJo SINE Alu 1 310 -2 4490 239 83 23 chr5 66945350 66946186 -136139346 + L1ME1 LINE L1 4433 5476 -759 1473 187 10 91 chr5 66946186 66946593 -136138939 + MLT1A2 LTR MaLR 1 374 0 4490 239 83 23 chr5 66946593 66947047 -136138485 + L1ME1 LINE L1 5476 5901 -334 2079 262 52 18 chr5 66947062 66947615 -136137917 - MLT1E LTR MaLR -9 584 13 570 225 40 50 chr5 66947615 66947815 -136137717 + L1ME1 LINE L1 6033 6230 -5 21 0 0 0 chr5 66948560 66948581 -136136951 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 66949311 66949348 -136136184 + AT_rich Low_complexity Low_complexity 1 37 0 1251 186 28 41 chr5 66949415 66949706 -136135826 - MER58B DNA MER1_type 0 341 55 6909 158 23 22 chr5 66949892 66951339 -136134193 - L1PA13 LINE L1 -11 7590 6119 207 24 49 24 chr5 66951339 66951380 -136134152 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 6909 158 23 22 chr5 66951380 66952004 -136133528 - L1PA13 LINE L1 -1482 6119 5497 1959 178 37 32 chr5 66952004 66952551 -136132981 - MLT2A1 LTR ERVL 0 554 1 4407 153 17 5 chr5 66952551 66953315 -136132217 - L1PA13 LINE L1 -2083 5501 4729 3249 164 5 10 chr5 66953302 66953888 -136131644 - L1PA13 LINE L1 -4613 2961 2379 * 7397 190 8 6 chr5 66953899 66955200 -136130332 - L1PA13 LINE L1 -6271 1310 7 2377 87 0 0 chr5 66955520 66955820 -136129712 + AluSc SINE Alu 1 300 -9 2028 146 7 0 chr5 66955883 66956184 -136129348 + AluSx SINE Alu 1 303 -9 1773 134 147 3 chr5 66956403 66956723 -136128809 - MER47A DNA MER2_type 0 366 1 479 258 76 8 chr5 66956779 66956911 -136128621 + MIR SINE MIR 13 153 -109 968 236 46 35 chr5 66957286 66957545 -136127987 - MIR SINE MIR 0 262 1 613 271 96 10 chr5 66957940 66958139 -136127393 + L2 LINE L2 3097 3312 -1 227 211 0 86 chr5 66958346 66958498 -136127034 + A-rich Low_complexity Low_complexity 2 140 0 50 18 0 0 chr5 66958823 66958880 -136126652 + AT_rich Low_complexity Low_complexity 1 57 0 216 0 0 0 chr5 66959738 66959762 -136125770 + (CA)n Simple_repeat Simple_repeat 2 25 0 479 262 45 30 chr5 66960617 66960819 -136124713 - L1MC5 LINE L1 -434 7527 7323 2494 246 81 19 chr5 66960915 66961115 -136124417 + L1ME3A LINE L1 4377 4563 -1601 903 232 0 5 chr5 66961115 66961305 -136124227 - MER5A DNA MER1_type 0 189 1 2494 246 81 19 chr5 66961305 66962289 -136123243 + L1ME3A LINE L1 4563 5632 -532 204 135 0 0 chr5 66962434 66962471 -136123061 + (CTACT)n Simple_repeat Simple_repeat 1 37 0 2470 114 3 8 chr5 66962992 66963359 -136122173 + MER47A DNA MER2_type 2 366 0 299 250 30 68 chr5 66964772 66964904 -136120628 + L1ME3A LINE L1 5820 5946 -224 1217 267 47 6 chr5 66964912 66965272 -136120260 + HAL1 LINE L1 1 375 -2132 1025 275 71 9 chr5 66965271 66965595 -136119937 + L1MC4 LINE L1 7123 7466 -576 * 6989 103 20 12 chr5 66965602 66966248 -136119284 - L1MA3 LINE L1 0 7724 7062 405 0 0 0 chr5 66966248 66966293 -136119239 + (CA)n Simple_repeat Simple_repeat 2 46 0 6989 103 20 12 chr5 66966293 66966841 -136118691 - L1MA3 LINE L1 -662 7062 6520 207 69 0 0 chr5 66966856 66966885 -136118647 + (TTA)n Simple_repeat Simple_repeat 3 31 0 6494 10 0 43 chr5 66966885 66967675 -136117857 - L1PA3 LINE L1 -18 6137 5382 344 0 0 0 chr5 66967671 66967710 -136117822 + L1P LINE L1 5334 5372 -783 * 13906 147 25 21 chr5 66967708 66968768 -136116764 - L1MA3 LINE L1 -1035 6530 5476 1888 143 55 30 chr5 66968768 66969131 -136116401 + THE1C LTR MaLR 4 375 0 13906 147 25 21 chr5 66969131 66970627 -136114905 - L1MA3 LINE L1 -2089 5476 3988 230 0 33 0 chr5 66970627 66970657 -136114875 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1582 152 7 42 chr5 66970662 66970808 -136114724 - AluJb SINE Alu -36 276 143 2393 93 0 0 chr5 66970808 66971119 -136114413 - AluY SINE Alu 0 311 1 1582 152 7 42 chr5 66971119 66971255 -136114277 - AluJb SINE Alu -169 143 4 13906 147 25 21 chr5 66971255 66971421 -136114111 - L1MA3 LINE L1 -3580 3985 3821 2224 110 0 0 chr5 66971421 66971713 -136113819 - AluSc SINE Alu -17 292 1 13906 147 25 21 chr5 66971713 66972636 -136112896 - L1MA3 LINE L1 -3744 3821 2904 2718 100 11 0 chr5 66972636 66973007 -136112525 + THE1C LTR MaLR 1 375 0 13906 147 25 21 chr5 66973007 66974635 -136110897 - L1MA3 LINE L1 -4661 2904 1099 687 127 34 8 chr5 66974633 66974751 -136110781 - L1MA3 LINE L1 -7433 132 12 * 566 234 186 69 chr5 66974747 66975038 -136110494 + L1MC4 LINE L1 7451 7775 -267 * 743 312 53 14 chr5 66975084 66975369 -136110163 + HAL1 LINE L1 404 699 -1808 533 249 180 22 chr5 66975444 66975761 -136109771 + HAL1 LINE L1 842 1208 -1299 * 744 231 158 14 chr5 66975758 66975979 -136109553 + HAL1 LINE L1 1513 1765 -742 385 235 355 19 chr5 66976017 66976383 -136109149 + HAL1 LINE L1 1857 2345 -162 1796 172 0 7 chr5 66976566 66976857 -136108675 - AluJo SINE Alu -23 289 1 872 242 11 0 chr5 66976933 66977115 -136108417 - MER58A DNA MER1_type -8 216 33 1061 261 39 23 chr5 66977141 66977447 -136108085 + Charlie2b DNA MER1_type 1 311 -2471 588 202 9 0 chr5 66977446 66977560 -136107972 + Charlie2b DNA MER1_type 556 670 -2112 * 1115 148 10 5 chr5 66977661 66977857 -136107675 + Charlie2a DNA MER1_type 1467 1663 -1199 333 172 269 0 chr5 66977858 66977951 -136107581 + Charlie2a DNA MER1_type 2708 2825 -37 32 57 0 0 chr5 66979073 66979126 -136106406 + AT_rich Low_complexity Low_complexity 1 53 0 381 295 53 48 chr5 66980543 66980770 -136104762 - MER112 DNA MER1_type 0 260 33 1811 151 79 69 chr5 66980773 66981024 -136104508 + MLT2D LTR ERVL 7 265 -149 2093 136 16 3 chr5 66981024 66981332 -136104200 - AluSx SINE Alu 0 312 1 1811 151 79 69 chr5 66981332 66981484 -136104048 + MLT2D LTR ERVL 265 414 0 347 327 13 26 chr5 66982240 66982393 -136103139 + LTR16C LTR ERVL 272 422 -69 1484 158 178 10 chr5 66982470 66982768 -136102764 - MER7A DNA MER2_type 0 346 1 312 201 134 47 chr5 66983142 66983291 -136102241 + L1ME4a LINE L1 5957 6118 -3 22 35 0 0 chr5 66983664 66983693 -136101839 + AT_rich Low_complexity Low_complexity 1 29 0 662 198 88 26 chr5 66983756 66983948 -136101584 - MER3 DNA MER1_type 0 209 6 1604 171 61 17 chr5 66984001 66984345 -136101187 - THE1C LTR MaLR -3 372 14 17601 45 9 0 chr5 66985988 66989005 -136096527 + L1PA5 LINE L1 3139 6153 -1 272 273 218 9 chr5 66989950 66990060 -136095472 - L2 LINE L2 -4 3268 3136 883 128 89 149 chr5 66990392 66990627 -136094905 - AluJo SINE Alu -7 305 85 344 271 112 34 chr5 66990669 66990964 -136094568 + L1ME4a LINE L1 5615 5932 -189 506 243 71 7 chr5 66991345 66991485 -136094047 + L2 LINE L2 3162 3310 -3 391 261 8 67 chr5 66992968 66993087 -136092445 - L2 LINE L2 0 3313 3202 598 277 125 31 chr5 66993095 66993594 -136091938 + L1MC4a LINE L1 5597 6164 -1644 2436 74 0 10 chr5 66993606 66993915 -136091617 + AluY SINE Alu 2 307 -4 21 0 0 0 chr5 66994056 66994077 -136091455 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 66994214 66994240 -136091292 + AT_rich Low_complexity Low_complexity 1 26 0 1118 186 47 78 chr5 66994280 66994729 -136090803 + L1MC5 LINE L1 6542 6917 -891 847 177 73 6 chr5 66994730 66994894 -136090638 + MER5A DNA MER1_type 15 189 0 369 209 70 16 chr5 66994894 66995023 -136090509 + L1MC5 LINE L1 7330 7465 -496 333 0 0 0 chr5 66995207 66995244 -136090288 + (TA)n Simple_repeat Simple_repeat 2 38 0 248 316 126 6 chr5 66995603 66995777 -136089755 + L2 LINE L2 1827 2021 -1293 899 286 72 19 chr5 66995787 66996105 -136089427 - LTR16C LTR ERVL -8 483 149 326 312 113 28 chr5 66996256 66996503 -136089029 + L2 LINE L2 2037 2304 -1010 * 781 295 148 25 chr5 66996487 66996947 -136088585 - L2 LINE L2 0 3313 2799 795 315 117 20 chr5 66996947 66997350 -136088182 - LTR16A LTR ERVL -8 442 1 334 295 299 0 chr5 66997382 66997599 -136087933 - L2 LINE L2 -568 2746 2465 597 311 84 16 chr5 66998084 66998257 -136087275 - L2 LINE L2 -963 2351 2154 2202 160 85 5 chr5 66998257 66998644 -136086888 - MER47B DNA MER2_type 0 418 1 597 311 84 16 chr5 66998644 66998721 -136086811 - L2 LINE L2 -1160 2154 2084 202 354 0 0 chr5 66998736 66998801 -136086731 + L2 LINE L2 2310 2374 -940 926 147 11 17 chr5 66998825 66999002 -136086530 + LTR28 LTR ERV1 1 176 -844 1285 228 16 22 chr5 66999069 66999389 -136086143 + LTR27 LTR ERV1 299 616 -20 573 306 18 72 chr5 66999505 66999674 -136085858 + L2 LINE L2 2567 2717 -597 866 147 57 0 chr5 66999674 66999851 -136085681 + MER53 DNA DNA 2 188 -1 573 306 18 72 chr5 66999851 66999959 -136085573 + L2 LINE L2 2717 2829 -485 2288 85 7 0 chr5 67000148 67000442 -136085090 + AluSp SINE Alu 1 296 -17 25 0 0 0 chr5 67000442 67000467 -136085065 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr5 67000524 67000556 -136084976 + AT_rich Low_complexity Low_complexity 1 32 0 188 302 217 9 chr5 67000562 67000668 -136084864 + L2 LINE L2 3182 3309 -4 278 87 22 0 chr5 67000866 67000912 -136084620 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 190 227 68 0 chr5 67001105 67001149 -136084383 + MIR SINE MIR 216 262 0 22 0 0 0 chr5 67002316 67002338 -136083194 + AT_rich Low_complexity Low_complexity 1 22 0 37 0 0 0 chr5 67002526 67002563 -136082969 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 67002783 67002813 -136082719 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 67002981 67003003 -136082529 + AT_rich Low_complexity Low_complexity 1 22 0 441 0 0 0 chr5 67003162 67003211 -136082321 + (TG)n Simple_repeat Simple_repeat 2 50 0 819 174 237 0 chr5 67004660 67004850 -136080682 + MER46A DNA MER2_type 1 235 -1 1210 282 126 42 chr5 67005572 67006458 -136079074 - L1MEc LINE L1 -4600 1796 986 1940 117 0 79 chr5 67006458 67006775 -136078757 - AluJb SINE Alu -20 292 1 1210 282 126 42 chr5 67006775 67006814 -136078718 - L1MEc LINE L1 -5410 986 952 811 195 130 0 chr5 67006814 67006999 -136078533 + MER3 DNA MER1_type 1 209 0 1210 282 126 42 chr5 67006999 67007601 -136077931 - L1MEc LINE L1 -5444 952 53 656 286 23 0 chr5 67007765 67007936 -136077596 - MIR SINE MIR -77 185 11 2192 113 3 0 chr5 67008180 67008471 -136077061 - AluSx SINE Alu -20 292 1 459 237 46 53 chr5 67008512 67008643 -136076889 - MIR SINE MIR -83 179 50 321 250 76 76 chr5 67008652 67008824 -136076708 + L1ME4a LINE L1 5676 5847 -274 2172 128 0 7 chr5 67009128 67009433 -136076099 - AluSx SINE Alu -9 303 1 24 0 0 0 chr5 67009620 67009644 -136075888 + AT_rich Low_complexity Low_complexity 1 24 0 2364 80 3 49 chr5 67010698 67011023 -136074509 + AluSp SINE Alu 1 310 -3 245 191 29 15 chr5 67011757 67011825 -136073707 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 71 0 0 chr5 67011840 67011882 -136073650 + AT_rich Low_complexity Low_complexity 1 42 0 244 213 85 0 chr5 67013156 67013203 -136072329 + L2 LINE L2 3261 3311 -2 360 0 0 0 chr5 67013209 67013249 -136072283 + (TG)n Simple_repeat Simple_repeat 1 40 0 8406 58 12 6 chr5 67013272 67015166 -136070366 - L1PA6 LINE L1 -3 6151 4249 1750 144 3 50 chr5 67015513 67015630 -136069902 + AluJo SINE Alu 11 132 -180 1827 95 88 53 chr5 67015630 67015914 -136069618 - AluSx SINE Alu -17 295 2 1750 144 3 50 chr5 67015914 67016095 -136069437 + AluJo SINE Alu 132 295 -17 2289 98 3 0 chr5 67016512 67016799 -136068733 - AluSg SINE Alu -22 288 1 306 0 0 0 chr5 67017192 67017226 -136068306 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 33 0 0 chr5 67017803 67017833 -136067699 + AT_rich Low_complexity Low_complexity 1 30 0 2043 138 37 3 chr5 67023220 67023546 -136061986 + MER1B DNA MER1_type 1 337 0 2276 66 16 20 chr5 67023959 67024264 -136061268 - AluSc SINE Alu -5 304 1 989 141 25 0 chr5 67024264 67024427 -136061105 - FRAM SINE Alu -10 166 1 1815 168 0 10 chr5 67024528 67024831 -136060701 - AluJb SINE Alu -10 302 3 2043 132 0 0 chr5 67025453 67025765 -136059767 - AluSx SINE Alu 0 314 3 2053 132 7 0 chr5 67025856 67026151 -136059381 + AluSq SINE Alu 1 297 -16 2072 79 4 29 chr5 67026158 67026436 -136059096 + AluSp SINE Alu 28 298 -15 422 225 40 98 chr5 67026439 67026612 -136058920 - MIR SINE MIR -13 249 87 2126 70 21 97 chr5 67027258 67027588 -136057944 + AluYb8 SINE Alu 1 305 -13 264 257 80 35 chr5 67027797 67027910 -136057622 + L2 LINE L2 3099 3216 -97 952 131 0 14 chr5 67029092 67029237 -136056295 - FLAM_C SINE Alu 0 143 1 25 0 0 0 chr5 67030139 67030164 -136055368 + AT_rich Low_complexity Low_complexity 1 25 0 755 157 7 36 chr5 67030595 67030735 -136054797 + AluJb SINE Alu 1 136 -176 344 203 47 0 chr5 67031262 67031326 -136054206 + MIR SINE MIR 14 80 -182 972 251 95 32 chr5 67031335 67031745 -136053787 + LTR16B LTR ERVL 8 443 -21 294 234 175 62 chr5 67031945 67032236 -136053296 + HERV16 LTR ERVL 264 587 -4409 2522 291 62 15 chr5 67032463 67033598 -136051934 + HERV16 LTR ERVL 2166 3355 -2299 2575 209 51 17 chr5 67033642 67034306 -136051226 - L1MC4a LINE L1 -744 7064 6378 21 0 0 0 chr5 67035557 67035578 -136049954 + AT_rich Low_complexity Low_complexity 1 21 0 911 240 142 32 chr5 67035741 67036256 -136049276 + MLT1F1 LTR MaLR 1 567 0 642 240 34 17 chr5 67036347 67036522 -136049010 - MER5B DNA MER1_type 0 178 1 224 374 78 35 chr5 67036578 67036808 -136048724 - L2 LINE L2 -107 3165 2926 233 240 126 114 chr5 67036901 67037172 -136048360 - L2 LINE L2 -716 2598 2325 644 246 23 6 chr5 67038632 67038807 -136046725 + MER5B DNA MER1_type 1 178 0 679 192 0 8 chr5 67041102 67041227 -136044305 - FLAM_C SINE Alu -9 124 1 489 34 0 0 chr5 67042109 67042168 -136043364 + (TG)n Simple_repeat Simple_repeat 2 60 0 2176 120 17 0 chr5 67042449 67042748 -136042784 - AluSx SINE Alu -8 304 1 744 242 65 2 chr5 67042829 67043122 -136042410 - L1ME3A LINE L1 -203 5959 5638 1118 221 158 19 chr5 67045417 67045828 -136039704 - L1ME3A LINE L1 -2212 3934 3467 583 239 0 0 chr5 67045831 67045973 -136039559 - L1MC4 LINE L1 -1440 6602 6461 1836 163 132 23 chr5 67046160 67046546 -136038986 + MSTA LTR MaLR 1 428 0 8835 130 20 50 chr5 67046548 67047499 -136038033 + MSTA-int LTR MaLR 3 886 -694 1813 128 88 23 chr5 67047499 67047851 -136037681 + THE1C LTR MaLR 1 375 0 8835 130 20 50 chr5 67047851 67048526 -136037006 + MSTA-int LTR MaLR 886 1580 0 1888 132 190 11 chr5 67048526 67048889 -136036643 + MSTA LTR MaLR 1 428 0 347 332 67 29 chr5 67049071 67049279 -136036253 + MIR SINE MIR 43 258 -4 * 449 235 50 181 chr5 67049228 67049466 -136036066 - MIR SINE MIR -24 238 32 203 310 17 0 chr5 67049492 67049550 -136035982 + L2 LINE L2 3214 3272 0 229 154 0 0 chr5 67050009 67050048 -136035484 + L2 LINE L2 3267 3305 -8 2638 248 141 45 chr5 67050091 67051663 -136033869 + HAL1 LINE L1 94 1986 -521 301 361 69 0 chr5 67052021 67052151 -136033381 - L1ME LINE L1 -5891 179 41 2884 128 19 19 chr5 67052202 67052561 -136032971 - L1PB2 LINE L1 -8 6143 5782 2092 120 10 7 chr5 67052561 67052861 -136032671 - AluSx SINE Alu -11 301 1 2884 128 19 19 chr5 67052861 67052987 -136032545 - L1PB2 LINE L1 -368 5783 5658 252 86 0 0 chr5 67053087 67053122 -136032410 + Alu SINE Alu 1 35 -267 180 0 0 0 chr5 67053138 67053158 -136032374 + (A)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr5 67053276 67053307 -136032225 + AT_rich Low_complexity Low_complexity 1 31 0 573 281 80 28 chr5 67053392 67053791 -136031741 + HAL1 LINE L1 2057 2476 -31 32 26 0 0 chr5 67053805 67053844 -136031688 + AT_rich Low_complexity Low_complexity 1 39 0 210 105 0 0 chr5 67054074 67054112 -136031420 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 23005 165 24 16 chr5 67054112 67060463 -136025069 - L1PA10 LINE L1 -20 6463 2 2075 173 36 63 chr5 67062195 67062639 -136022893 + MSTB1 LTR MaLR 1 432 0 814 255 119 113 chr5 67062649 67063032 -136022500 + L2 LINE L2 1296 1686 -1628 6620 62 25 2 chr5 67063032 67063987 -136021545 + L1PA6 LINE L1 5203 6154 0 814 255 119 113 chr5 67063987 67064309 -136021223 + L2 LINE L2 1686 2005 -1309 1013 164 24 24 chr5 67064319 67064527 -136021005 + SVA Other Other 469 676 -710 324 274 59 26 chr5 67064646 67064737 -136020795 - LTR16C LTR ERVL -8 483 396 2231 133 25 19 chr5 67064737 67065099 -136020433 - THE1B LTR MaLR 0 364 1 11991 80 14 0 chr5 67065099 67066658 -136018874 - THE1B-int LTR MaLR 0 1580 1 2291 135 22 19 chr5 67066658 67067021 -136018511 - THE1B LTR MaLR 0 364 1 324 274 59 26 chr5 67067021 67067080 -136018452 - LTR16C LTR ERVL -94 397 326 875 282 105 32 chr5 67067450 67067985 -136017547 + L2 LINE L2 2075 2648 -666 236 313 110 46 chr5 67068141 67068336 -136017196 - HAL1b LINE L1 -519 829 648 2181 143 0 15 chr5 67068336 67068678 -136016854 - MER1B DNA MER1_type 0 337 1 236 313 110 46 chr5 67068678 67068872 -136016660 - HAL1b LINE L1 -700 648 415 232 287 33 0 chr5 67069021 67069143 -136016389 - HAL1b LINE L1 -1156 192 67 2089 118 10 3 chr5 67069365 67069671 -136015861 + AluSg SINE Alu 1 308 -2 588 287 135 53 chr5 67072293 67072708 -136012824 - LTR16A1 LTR ERVL -7 450 2 276 321 10 129 chr5 67073283 67073492 -136012040 + L2 LINE L2 3037 3220 -52 187 324 0 27 chr5 67073582 67073656 -136011876 - L2 LINE L2 -826 2488 2417 2066 224 110 17 chr5 67073665 67073796 -136011736 - MLT1E1 LTR MaLR -6 648 531 2228 101 3 16 chr5 67073796 67074103 -136011429 - AluY SINE Alu -8 303 1 2066 224 110 17 chr5 67074103 67074564 -136010968 - MLT1E1 LTR MaLR -123 531 1 638 279 111 8 chr5 67078507 67078769 -136006763 - MLT1I LTR MaLR -6 403 115 303 89 22 0 chr5 67078818 67078863 -136006669 - Tigger7 DNA MER2_type -34 2453 2408 1180 204 15 37 chr5 67078874 67079144 -136006388 - Tigger7 DNA MER2_type -2223 264 1 1842 226 64 70 chr5 67079367 67080022 -136005510 - MLT1E1 LTR MaLR -3 651 1 437 296 54 8 chr5 67081381 67081553 -136003979 + MIR SINE MIR 3 191 -17 644 323 32 34 chr5 67081569 67081728 -136003804 + L1M4 LINE L1 3772 3930 -2216 1853 139 31 67 chr5 67081728 67082117 -136003415 + THE1C LTR MaLR 1 375 0 644 323 32 34 chr5 67082117 67082548 -136002984 + L1M4 LINE L1 3930 4361 -1785 1006 309 9 19 chr5 67082645 67082962 -136002570 + L2 LINE L2 1008 1321 -1993 2486 168 83 6 chr5 67082978 67083147 -136002385 + L1MB3 LINE L1 5605 5760 -423 378 0 0 0 chr5 67083147 67083189 -136002343 + (CA)n Simple_repeat Simple_repeat 1 42 0 2486 168 83 6 chr5 67083189 67083550 -136001982 + L1MB3 LINE L1 5760 6176 -7 484 294 163 20 chr5 67083560 67083812 -136001720 + Charlie2 DNA MER1_type 36 323 -2539 384 217 72 7 chr5 67083816 67083954 -136001578 + Charlie2 DNA MER1_type 1856 2002 -860 504 205 16 0 chr5 67084085 67084207 -136001325 + Charlie2 DNA MER1_type 2728 2851 -11 2676 247 74 36 chr5 67084221 67085104 -136000428 + L2 LINE L2 1306 2221 -1093 970 194 0 0 chr5 67085374 67085544 -135999988 - FRAM SINE Alu -9 167 1 379 217 62 39 chr5 67085628 67085757 -135999775 + LTR33 LTR ERVL 390 521 0 640 300 51 4 chr5 67085758 67086031 -135999501 + L2 LINE L2 2234 2519 -795 2121 118 38 54 chr5 67086034 67086458 -135999074 + MSTB1 LTR MaLR 1 417 -15 313 169 31 0 chr5 67086471 67086536 -135998996 + L2 LINE L2 2546 2612 -702 451 275 109 40 chr5 67086537 67087035 -135998497 + L1ME3 LINE L1 5320 5840 -322 342 0 0 0 chr5 67087241 67087279 -135998253 + (TG)n Simple_repeat Simple_repeat 1 38 0 228 67 0 0 chr5 67087279 67087309 -135998223 + (GA)n Simple_repeat Simple_repeat 2 31 0 363 273 99 0 chr5 67087417 67087538 -135997994 + L2 LINE L2 3165 3297 -16 273 291 88 34 chr5 67088274 67088422 -135997110 + MER91A DNA MER1_type 1 156 -40 741 185 53 20 chr5 67089626 67089777 -135995755 + MLT1B LTR MaLR 4 159 -215 667 178 0 16 chr5 67089797 67090048 -135995484 + (TG)n Simple_repeat Simple_repeat 1 246 0 965 207 40 15 chr5 67090051 67090249 -135995283 + MLT1B LTR MaLR 188 390 0 263 361 8 0 chr5 67090741 67090874 -135994658 + MER5A DNA MER1_type 3 136 -53 1658 230 191 0 chr5 67090874 67091340 -135994192 + MLT1H1 LTR MaLR 1 555 0 408 273 82 55 chr5 67092458 67092641 -135992891 + MER5A DNA MER1_type 1 188 -1 948 242 100 11 chr5 67092654 67092935 -135992597 + L1MEc LINE L1 34 339 -6057 1682 147 35 0 chr5 67092991 67093250 -135992282 + AluJb SINE Alu 1 268 -44 231 219 55 0 chr5 67093593 67093666 -135991866 + L1ME4a LINE L1 6044 6120 -1 28 0 0 0 chr5 67093671 67093699 -135991833 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 67093714 67093735 -135991797 + AT_rich Low_complexity Low_complexity 1 21 0 333 246 147 40 chr5 67094626 67094827 -135990705 + L1MC4a LINE L1 5927 6156 -1652 1635 190 21 3 chr5 67094827 67095117 -135990415 - AluJo SINE Alu -12 300 6 333 246 147 40 chr5 67095117 67095139 -135990393 + L1MC4a LINE L1 6156 6174 -1634 6470 46 0 1 chr5 67095317 67096133 -135989399 + L1PA6 LINE L1 5364 6178 0 432 0 0 0 chr5 67096379 67096427 -135989105 + (TG)n Simple_repeat Simple_repeat 1 48 0 264 59 0 0 chr5 67096797 67096831 -135988701 + (TG)n Simple_repeat Simple_repeat 2 35 0 337 239 138 29 chr5 67097535 67097673 -135987859 + MLT1F LTR MaLR 20 172 -418 615 78 0 0 chr5 67097675 67097787 -135987745 + AluY SINE Alu 205 316 0 599 276 61 41 chr5 67097791 67098084 -135987448 + MLT1F LTR MaLR 163 461 -81 44239 46 5 1 chr5 67098107 67104233 -135981299 + L1PA4 LINE L1 1 6150 -5 485 301 32 6 chr5 67104505 67104661 -135980871 - MIR3 SINE MIR -43 165 6 26 0 0 0 chr5 67105608 67105634 -135979898 + AT_rich Low_complexity Low_complexity 1 26 0 21 71 0 0 chr5 67106030 67106072 -135979460 + AT_rich Low_complexity Low_complexity 1 42 0 356 216 18 102 chr5 67106239 67106359 -135979173 + L1ME LINE L1 5667 5771 -350 2179 141 0 0 chr5 67106359 67106671 -135978861 + AluSx SINE Alu 1 312 0 356 216 18 102 chr5 67106671 67106717 -135978815 + L1ME LINE L1 5771 5819 -302 227 175 70 35 chr5 67106731 67106788 -135978744 + L1ME3A LINE L1 5425 5483 -2325 303 256 37 0 chr5 67107554 67107636 -135977896 + L1MEc LINE L1 2 86 -6033 650 92 82 0 chr5 67107658 67107756 -135977776 + AluSq/x SINE Alu 2 107 -205 239 216 51 81 chr5 67107874 67108028 -135977504 + L1M3 LINE L1 5382 5549 -576 345 218 39 0 chr5 67108236 67108314 -135977218 + L1ME3A LINE L1 5760 5840 -330 360 0 0 0 chr5 67108521 67108561 -135976971 + (TG)n Simple_repeat Simple_repeat 1 40 0 228 67 0 0 chr5 67108561 67108591 -135976941 + (GA)n Simple_repeat Simple_repeat 2 31 0 403 194 0 0 chr5 67108981 67109053 -135976479 - AluSc SINE Alu -225 84 13 1900 198 39 18 chr5 67109061 67109228 -135976304 - L1 LINE L1 -3602 3963 3801 1874 154 0 3 chr5 67109228 67109521 -135976011 - AluSc SINE Alu -17 292 1 1900 198 39 18 chr5 67109521 67110126 -135975406 - L1 LINE L1 -3764 3801 3183 378 309 163 24 chr5 67110306 67110558 -135974974 - Charlie2 DNA MER1_type -2540 322 36 2024 218 79 6 chr5 67110568 67110929 -135974603 - L1MB3 LINE L1 -7 6176 5762 414 0 0 0 chr5 67110929 67110975 -135974557 + (TG)n Simple_repeat Simple_repeat 1 46 0 2024 218 79 6 chr5 67110975 67111146 -135974386 - L1MB3 LINE L1 -421 5762 5605 198 329 26 13 chr5 67111171 67111247 -135974285 - L2 LINE L2 -2001 1313 1237 399 335 74 66 chr5 67111353 67111866 -135973666 + L1MEc LINE L1 64 572 -5738 746 211 130 0 chr5 67111866 67112051 -135973481 - MER3 DNA MER1_type 0 209 1 399 335 74 66 chr5 67112051 67112091 -135973441 + L1MEc LINE L1 572 610 -5700 1627 140 0 113 chr5 67112091 67112419 -135973113 + AluJb SINE Alu 2 292 -10 399 335 74 66 chr5 67112419 67112638 -135972894 + L1MEc LINE L1 610 843 -5467 471 35 0 0 chr5 67112899 67112956 -135972576 + (CA)n Simple_repeat Simple_repeat 2 58 0 617 239 15 0 chr5 67113851 67113985 -135971547 + BC200 scRNA scRNA 14 149 -51 240 299 0 11 chr5 67114147 67114234 -135971298 + L1 LINE L1 5026 5111 -1035 * 329 26 0 0 chr5 67114232 67114271 -135971261 - L1P LINE L1 -783 5372 5334 5632 88 0 3 chr5 67114271 67115039 -135970493 + L1PA4 LINE L1 5382 6151 -4 189 107 0 0 chr5 67115220 67115248 -135970284 + (CA)n Simple_repeat Simple_repeat 1 28 0 354 324 34 7 chr5 67115319 67115467 -135970065 - MIR3 SINE MIR -51 157 6 7327 120 20 5 chr5 67116933 67118030 -135967502 - THE1B-int LTR MaLR -466 1114 1 1845 193 20 20 chr5 67118030 67118383 -135967149 - THE1B LTR MaLR 0 364 12 534 179 9 28 chr5 67118555 67118661 -135966871 - MLT1A2 LTR MaLR -262 112 9 4891 151 19 21 chr5 67119857 67120495 -135965037 + L1M1 LINE L1 2227 2864 -4701 2400 140 11 3 chr5 67120495 67120867 -135964665 - THE1C LTR MaLR 0 375 1 4891 151 19 21 chr5 67120867 67121163 -135964369 + L1M1 LINE L1 2864 3159 -4406 230 295 82 43 chr5 67121314 67121521 -135964011 + MIR SINE MIR 44 258 -4 * 241 355 28 0 chr5 67121470 67121577 -135963955 - MIR SINE MIR -24 238 129 299 244 121 9 chr5 67121592 67121708 -135963824 - MIR SINE MIR -48 160 32 295 327 138 14 chr5 67122408 67122625 -135962907 + HAL1 LINE L1 201 444 -2063 405 270 158 49 chr5 67123099 67123403 -135962129 - HERV16 LTR ERVL -4409 587 251 471 290 54 39 chr5 67123592 67123851 -135961681 - LTR16B LTR ERVL -23 441 179 303 305 79 28 chr5 67124222 67124399 -135961133 - HAL1 LINE L1 -331 2176 1991 24 32 0 0 chr5 67124416 67124447 -135961085 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 67124565 67124589 -135960943 + AT_rich Low_complexity Low_complexity 1 24 0 250 86 0 0 chr5 67124600 67124635 -135960897 - Alu SINE Alu -264 35 1 2669 153 14 24 chr5 67124735 67124864 -135960668 + L1PB2 LINE L1 5658 5787 -364 1787 154 10 10 chr5 67124864 67125162 -135960370 + AluSx SINE Alu 4 301 -11 2669 153 14 24 chr5 67125162 67125523 -135960009 + L1PB2 LINE L1 5787 6143 -8 555 249 34 28 chr5 67127743 67127920 -135957612 + MER5B DNA MER1_type 1 178 0 977 239 146 36 chr5 67128011 67128526 -135957006 - MLT1F1 LTR MaLR 0 567 1 21 0 0 0 chr5 67128689 67128710 -135956822 + AT_rich Low_complexity Low_complexity 1 21 0 222 118 0 0 chr5 67129074 67129108 -135956424 + (CA)n Simple_repeat Simple_repeat 2 35 0 468 0 0 0 chr5 67129480 67129532 -135956000 + (CA)n Simple_repeat Simple_repeat 1 52 0 360 0 0 0 chr5 67129778 67129818 -135955714 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 6490 46 0 1 chr5 67129818 67130594 -135954938 - L1PA6 LINE L1 -16 6138 5364 22 35 0 0 chr5 67130765 67130794 -135954738 + AT_rich Low_complexity Low_complexity 1 29 0 1390 221 21 3 chr5 67130794 67131079 -135954453 + AluJo SINE Alu 6 295 -17 360 0 0 0 chr5 67132550 67132590 -135952942 + (TTCTC)n Simple_repeat Simple_repeat 1 40 0 2068 124 10 3 chr5 67132590 67132896 -135952636 - AluSg SINE Alu -2 308 1 444 297 109 34 chr5 67133050 67133323 -135952209 + L1M4 LINE L1 61 1161 -1103 1727 197 3 12 chr5 67133583 67133913 -135951619 + MER1B DNA MER1_type 1 327 -12 2738 79 14 3 chr5 67134014 67134382 -135951150 + L1PA10 LINE L1 5797 6168 0 1495 290 40 57 chr5 67134410 67135136 -135950396 - L1MEd LINE L1 -5302 817 105 2019 126 25 0 chr5 67135136 67135422 -135950110 - AluSx SINE Alu -19 293 1 1495 290 40 57 chr5 67135422 67135525 -135950007 - L1MEd LINE L1 -6014 105 2 227 175 70 35 chr5 67136292 67136349 -135949183 - L1MC/D LINE L1 -2325 5483 5425 361 216 24 108 chr5 67136363 67136409 -135949123 - L1ME LINE L1 -302 5819 5771 1888 166 3 6 chr5 67136409 67136722 -135948810 - AluSx SINE Alu 0 312 1 361 216 24 108 chr5 67136722 67136842 -135948690 - L1ME LINE L1 -350 5771 5667 1840 38 5 0 chr5 67337005 67337218 -135748314 - AluY SINE Alu -14 297 84 275 282 32 48 chr5 67337804 67337928 -135747604 + MER5A DNA MER1_type 63 184 -5 2245 92 0 0 chr5 67339686 67340008 -135745524 - AluSx SINE Alu 0 322 1 1360 221 103 51 chr5 67340590 67341142 -135744390 + L1MC4a LINE L1 5246 5455 -701 207 0 0 0 chr5 67342066 67342089 -135743443 + (T)n Simple_repeat Simple_repeat 1 23 0 186 43 0 0 chr5 67342192 67342215 -135743317 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 2455 76 0 0 chr5 67343299 67343601 -135741931 - AluSc SINE Alu -6 303 2 1551 192 47 31 chr5 67344550 67344909 -135740623 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr5 67345845 67345867 -135739665 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 202 367 0 0 chr5 67345871 67345931 -135739601 - L2 LINE L2 -25 3247 3188 249 218 0 0 chr5 67345961 67346016 -135739516 + T-rich Low_complexity Low_complexity 1 55 0 7307 37 0 0 chr5 67346016 67346886 -135738646 - L1PA3 LINE L1 0 6155 5286 538 264 237 39 chr5 67346935 67347470 -135738062 - L2 LINE L2 -383 2931 2291 461 286 70 41 chr5 67347887 67348106 -135737426 - MIR SINE MIR -32 230 18 2337 74 3 3 chr5 67348305 67348602 -135736930 + AluSx SINE Alu 1 297 -15 2237 88 7 23 chr5 67349973 67350280 -135735252 + AluSq SINE Alu 1 302 -11 472 304 33 17 chr5 67351040 67351221 -135734311 - MIR3 SINE MIR -2 206 23 1844 121 37 4 chr5 67351377 67351678 -135733854 - AluSx SINE Alu 0 310 1 2253 104 0 0 chr5 67351952 67352241 -135733291 - AluSx SINE Alu -23 289 1 1210 148 35 0 chr5 67352611 67352813 -135732719 - MER3 DNA MER1_type 0 209 1 310 345 79 29 chr5 67353033 67353172 -135732360 + MIR SINE MIR 34 179 -83 3107 107 48 21 chr5 67353795 67354040 -135731492 - L1MA2 LINE L1 0 6304 6067 1617 170 16 26 chr5 67354040 67354346 -135731186 - AluSx SINE Alu -9 303 1 3107 107 48 21 chr5 67354346 67354615 -135730917 - L1MA2 LINE L1 -237 6067 5776 2695 105 18 0 chr5 67354623 67355012 -135730520 - L1PA14 LINE L1 -16 6145 5750 6252 158 21 26 chr5 67355012 67356250 -135729282 - L1MA2 LINE L1 -817 5329 4098 2445 87 0 3 chr5 67356250 67356562 -135728970 + AluSq SINE Alu 1 311 -2 358 319 203 8 chr5 67357220 67357471 -135728061 + L3 LINE CR1 1263 1562 -15 591 251 43 114 chr5 67357798 67357853 -135727679 + MIR SINE MIR 5 62 -200 2122 107 28 0 chr5 67357853 67358142 -135727390 - AluSg SINE Alu -12 298 2 591 251 43 114 chr5 67358142 67358250 -135727282 + MIR SINE MIR 62 146 -116 701 232 11 17 chr5 67358250 67358427 -135727105 - MER104 DNA MER2_type -4 176 1 591 251 43 114 chr5 67358427 67358517 -135727015 + MIR SINE MIR 146 241 -21 291 316 70 49 chr5 67358734 67359099 -135726433 - L2 LINE L2 -182 3090 2717 1469 240 83 76 chr5 67359405 67360269 -135725263 - L1MC4 LINE L1 -2 8040 7171 695 166 48 123 chr5 67360320 67360507 -135725025 + MER2 DNA MER2_type 1 173 -172 1505 210 7 7 chr5 67360609 67360904 -135724628 - AluJo SINE Alu -15 297 3 236 182 0 23 chr5 67360905 67360949 -135724583 + MER2 DNA MER2_type 274 316 -29 1427 228 0 27 chr5 67361497 67361795 -135723737 - AluJo SINE Alu -20 292 3 21 0 0 0 chr5 67361805 67361826 -135723706 + AT_rich Low_complexity Low_complexity 1 21 0 186 103 0 0 chr5 67362811 67362840 -135722692 + (TG)n Simple_repeat Simple_repeat 2 30 0 310 330 98 11 chr5 67363066 67363330 -135722202 - L2 LINE L2 -1227 2087 1801 523 192 5 28 chr5 67363654 67363836 -135721696 - MER8 DNA MER2_type -15 224 1 2323 87 3 13 chr5 67364215 67364524 -135721008 + AluSc SINE Alu 1 306 -3 2422 80 0 0 chr5 67364589 67364900 -135720632 + AluY SINE Alu 1 311 0 186 143 0 0 chr5 67365068 67365103 -135720429 + (T)n Simple_repeat Simple_repeat 1 35 0 182 88 0 29 chr5 67366530 67366564 -135718968 + (TG)n Simple_repeat Simple_repeat 2 34 0 2297 84 0 7 chr5 67366652 67366951 -135718581 - AluSp SINE Alu -16 297 1 188 158 76 6 chr5 67367155 67367313 -135718219 + (TA)n Simple_repeat Simple_repeat 2 170 0 3136 98 13 6 chr5 67367433 67367900 -135717632 - L1PB2 LINE L1 0 6151 5682 338 284 35 60 chr5 67368161 67368277 -135717255 + MIR SINE MIR 32 144 -64 22 35 0 0 chr5 67368356 67368385 -135717147 + AT_rich Low_complexity Low_complexity 1 29 0 2376 90 3 0 chr5 67369056 67369355 -135716177 + AluSp SINE Alu 1 300 -13 224 202 263 30 chr5 67369744 67369843 -135715689 - L2 LINE L2 -5 3308 3187 1972 152 20 0 chr5 67370577 67370880 -135714652 + AluJb SINE Alu 1 309 -3 225 389 123 12 chr5 67372402 67372564 -135712968 - L2 LINE L2 -3 3269 3090 563 267 88 21 chr5 67372709 67372949 -135712583 - L1ME LINE L1 -347 5823 5568 198 0 0 0 chr5 67373494 67373516 -135712016 + (A)n Simple_repeat Simple_repeat 1 22 0 297 319 94 38 chr5 67373996 67374156 -135711376 + MIR SINE MIR 23 191 -71 242 293 253 0 chr5 67375232 67375331 -135710201 - L2 LINE L2 -22 3250 3127 241 313 25 12 chr5 67375979 67376059 -135709473 - MIR3 SINE MIR -28 180 100 3180 125 0 6 chr5 67376291 67376771 -135708761 - LOR1a LTR ERV1 -19 478 2 558 107 0 98 chr5 67376772 67376894 -135708638 - LOR1a-int LTR ERV1 0 8120 8011 * 1727 96 64 4 chr5 67376864 67377113 -135708419 - LOR1a-int LTR ERV1 -2056 6064 5801 * 14890 101 37 20 chr5 67377103 67378395 -135707137 - LOR1a-int LTR ERV1 -2596 5524 4173 4888 41 2 10 chr5 67378395 67379011 -135706521 - L1PA4 LINE L1 -3 6152 5542 14890 101 37 20 chr5 67379011 67380066 -135705466 - LOR1a-int LTR ERV1 -3947 4173 3137 2655 106 18 38 chr5 67380057 67380501 -135705031 - LOR1a-int LTR ERV1 -5376 2744 2310 * 9190 102 32 25 chr5 67380488 67380519 -135705013 - LOR1a-int LTR ERV1 -6658 1462 1433 1623 99 36 0 chr5 67380519 67380740 -135704792 - AluSc SINE Alu -47 262 34 9190 102 32 25 chr5 67380740 67382160 -135703372 - LOR1a-int LTR ERV1 -6687 1433 1 3182 114 18 8 chr5 67382160 67382651 -135702881 - LOR1a LTR ERV1 0 497 2 231 265 206 0 chr5 67382669 67382771 -135702761 + MIR SINE MIR 105 227 -35 667 232 0 0 chr5 67383853 67383978 -135701554 - FLAM_A SINE Alu -7 126 2 22 0 0 0 chr5 67384905 67384927 -135700605 + AT_rich Low_complexity Low_complexity 1 22 0 627 252 113 4 chr5 67386646 67386876 -135698656 - L1ME3 LINE L1 -260 5902 5648 3097 159 15 28 chr5 67387025 67387641 -135697891 - L1MD3 LINE L1 0 7995 7388 711 158 18 42 chr5 67387661 67387826 -135697706 - L1MA8 LINE L1 -5 6286 6126 1896 154 3 7 chr5 67387831 67388129 -135697403 - AluJb SINE Alu -15 297 1 517 177 26 18 chr5 67388186 67388299 -135697233 - MLT1F1 LTR MaLR -453 114 1 2321 182 37 32 chr5 67388302 67388668 -135696864 - L1MD3 LINE L1 -720 7275 6913 1587 184 7 25 chr5 67388668 67389011 -135696521 - AluJo SINE Alu 0 343 6 2218 108 0 29 chr5 67389021 67389335 -135696197 - AluSx SINE Alu -5 307 3 2321 182 37 32 chr5 67389335 67389494 -135696038 - L1MD3 LINE L1 -1090 6905 6735 246 211 53 0 chr5 67390236 67390293 -135695239 + C-rich Low_complexity Low_complexity 6 65 0 2181 20 0 0 chr5 67391357 67391612 -135693920 - L1PA2 LINE L1 0 6155 5901 2291 105 0 3 chr5 67391969 67392275 -135693257 - AluSq SINE Alu -8 305 1 353 248 80 36 chr5 67392993 67393048 -135692484 - MIR3 SINE MIR -41 167 116 2271 111 0 0 chr5 67393048 67393355 -135692177 + AluSx SINE Alu 1 307 -5 353 248 80 36 chr5 67393355 67393436 -135692096 - MIR3 SINE MIR -92 116 25 222 184 286 0 chr5 67394138 67394187 -135691345 - L2 LINE L2 0 3313 3251 27 62 0 0 chr5 67395308 67395356 -135690176 + AT_rich Low_complexity Low_complexity 1 48 0 197 296 141 63 chr5 67395785 67395927 -135689605 - MIR3 SINE MIR -39 169 17 268 286 71 0 chr5 67397195 67397279 -135688253 - MIR SINE MIR -56 206 117 333 150 0 62 chr5 67397882 67398003 -135687529 + MER5A DNA MER1_type 1 157 -32 212 306 40 40 chr5 67398284 67398408 -135687124 - L2 LINE L2 -1 3271 3148 1879 100 3 93 chr5 67398441 67398773 -135686759 - AluSq SINE Alu 0 304 1 307 233 41 0 chr5 67398917 67398990 -135686542 + MIR SINE MIR 120 195 -67 23 33 0 0 chr5 67399965 67399995 -135685537 + AT_rich Low_complexity Low_complexity 1 30 0 1018 205 129 66 chr5 67401569 67402056 -135683476 - Charlie1b DNA MER1_type -1 522 5 522 289 118 14 chr5 67402461 67402672 -135682860 - MIR SINE MIR -6 256 24 2269 77 0 27 chr5 67404132 67404430 -135681102 - AluY SINE Alu -21 290 1 1413 99 14 68 chr5 67406044 67406265 -135679267 + MER1B DNA MER1_type 131 339 0 216 67 0 0 chr5 67406344 67406374 -135679158 + (TG)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr5 67408170 67408196 -135677336 + AT_rich Low_complexity Low_complexity 1 26 0 480 244 30 8 chr5 67408621 67408752 -135676780 - L1ME3A LINE L1 -219 5951 5818 1232 203 16 31 chr5 67408791 67409112 -135676420 - MER33 DNA MER1_type -8 316 1 263 307 150 31 chr5 67411207 67411334 -135674198 + MIR3 SINE MIR 2 143 -65 277 188 43 58 chr5 67411775 67411844 -135673688 + L3 LINE CR1 1492 1559 -18 259 234 65 13 chr5 67411862 67411939 -135673593 - MER61A LTR ERV1 -202 141 61 194 327 168 47 chr5 67412158 67412265 -135673267 + L2 LINE L2 3148 3267 -5 317 256 187 53 chr5 67412772 67413095 -135672437 - L1ME4a LINE L1 -82 6039 5642 366 42 0 0 chr5 67413095 67413143 -135672389 + (TG)n Simple_repeat Simple_repeat 1 48 0 317 256 187 53 chr5 67413143 67413253 -135672279 - L1ME4a LINE L1 -479 5642 5548 2258 115 0 0 chr5 67413302 67413597 -135671935 + AluSx SINE Alu 1 295 -17 536 319 6 6 chr5 67414051 67414214 -135671318 + MIR SINE MIR 10 172 -90 282 318 27 27 chr5 67415921 67416031 -135669501 - MER5B DNA MER1_type -68 110 1 1864 65 53 8 chr5 67416649 67416911 -135668621 + L1PA7 LINE L1 5878 6151 -3 337 322 52 0 chr5 67417180 67417295 -135668237 - MIR SINE MIR -66 142 22 2653 114 37 22 chr5 67417427 67417842 -135667690 - MSTC LTR MaLR 0 416 9 21 0 0 0 chr5 67417976 67417997 -135667535 + AT_rich Low_complexity Low_complexity 1 21 0 2232 79 0 31 chr5 67418001 67418338 -135667194 + AluY SINE Alu 3 330 0 298 320 41 20 chr5 67419291 67419438 -135666094 + MIR SINE MIR 78 227 -35 276 270 16 16 chr5 67419538 67419601 -135665931 - L2 LINE L2 -53 3219 3157 267 325 104 81 chr5 67419793 67420215 -135665317 + L2 LINE L2 2281 2712 -602 9012 162 53 9 chr5 67420384 67423133 -135662399 - L1PB4 LINE L1 -1 6155 3239 517 259 0 28 chr5 67423156 67423299 -135662233 - L1MC4a LINE L1 -1889 5919 5781 555 339 38 73 chr5 67423376 67423829 -135661703 + L2 LINE L2 2748 3178 -135 382 261 98 57 chr5 67423829 67424074 -135661458 - MER112 DNA MER1_type -1 255 1 555 339 38 73 chr5 67424074 67424206 -135661326 + L2 LINE L2 3178 3313 0 197 258 30 30 chr5 67425512 67425578 -135659954 + MIR SINE MIR 85 150 -112 278 331 104 37 chr5 67425756 67425919 -135659613 + MIR SINE MIR 18 191 -71 469 256 83 20 chr5 67426817 67427000 -135658532 + MIR SINE MIR 32 221 -41 639 78 20 29 chr5 67427766 67427868 -135657664 + L1MB8 LINE L1 6078 6178 0 207 0 0 0 chr5 67428525 67428548 -135656984 + (CA)n Simple_repeat Simple_repeat 1 23 0 249 244 195 0 chr5 67429693 67429775 -135655757 - MIR3 SINE MIR -27 181 84 724 252 119 24 chr5 67434259 67434469 -135651063 - MIR SINE MIR -1 261 32 1858 153 7 4 chr5 67434503 67434828 -135650704 - AluSg SINE Alu 0 326 1 234 364 13 0 chr5 67435870 67435947 -135649585 - L3 LINE CR1 -2 1575 1498 2108 126 0 77 chr5 67437025 67437390 -135648142 + MER1B DNA MER1_type 1 337 0 217 222 32 32 chr5 67439268 67439331 -135646201 - L2 LINE L2 -92 3221 3159 1003 105 0 12 chr5 67440004 67440166 -135645366 + (TTCC)n Simple_repeat Simple_repeat 3 162 0 2187 92 14 0 chr5 67440166 67440447 -135645085 - AluY SINE Alu -25 286 2 2057 131 34 0 chr5 67440704 67440995 -135644537 + AluSx SINE Alu 1 301 -11 457 311 169 14 chr5 67442373 67442592 -135642940 + MIR SINE MIR 10 262 0 625 303 34 26 chr5 67442984 67443251 -135642281 + MLT1H1 LTR MaLR 1 269 -286 302 243 14 0 chr5 67443305 67443379 -135642153 + MLT1H1 LTR MaLR 454 528 -27 313 282 19 19 chr5 67444430 67444533 -135640999 - MIR SINE MIR -86 176 74 411 284 31 56 chr5 67445810 67445841 -135639691 + MIR SINE MIR 103 133 -129 1990 162 25 8 chr5 67445841 67446199 -135639333 + MLT1A1 LTR MaLR 2 365 0 411 284 31 56 chr5 67446199 67446329 -135639203 + MIR SINE MIR 133 260 -2 2859 220 71 26 chr5 67446413 67447218 -135638314 - L1ME1 LINE L1 -22 6078 5311 2765 132 49 10 chr5 67447218 67447712 -135637820 - L1MC1 LINE L1 -5 6328 5816 2859 220 71 26 chr5 67447712 67448658 -135636874 - L1ME1 LINE L1 -789 5311 4248 3160 224 36 9 chr5 67448733 67449598 -135635934 - L1ME1 LINE L1 -1953 4127 3240 1449 124 9 35 chr5 67449598 67449824 -135635708 - AluSx SINE Alu -84 228 9 1350 164 7 30 chr5 67449824 67450093 -135635439 - MSTD LTR MaLR -133 263 1 2331 240 61 66 chr5 67450104 67450835 -135634697 - L1ME1 LINE L1 -3548 2532 1799 242 71 0 24 chr5 67450835 67450877 -135634655 + (TA)n Simple_repeat Simple_repeat 1 41 0 2331 240 61 66 chr5 67450877 67452137 -135633395 - L1ME1 LINE L1 -4281 1799 549 279 71 0 0 chr5 67452159 67452201 -135633331 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7534 21 11 0 chr5 67452201 67453465 -135632067 - L1PA3 LINE L1 -10 6145 4870 241 279 82 51 chr5 67453530 67453688 -135631844 - L1ME1 LINE L1 -5545 525 363 1223 103 0 0 chr5 67453880 67454045 -135631487 + AluY SINE Alu 140 304 -7 703 217 19 0 chr5 67454049 67454206 -135631326 + MLT1A1 LTR MaLR 204 363 -2 401 245 103 16 chr5 67454206 67454390 -135631142 - L1ME3A LINE L1 -23 6147 5948 642 152 0 0 chr5 67454390 67454495 -135631037 - AluSx SINE Alu 0 310 206 536 208 25 0 chr5 67454499 67454619 -135630913 - AluSx SINE Alu -176 136 14 444 234 0 11 chr5 67455019 67455113 -135630419 - MER8 DNA MER2_type -145 94 2 * 551 184 158 56 chr5 67455113 67455308 -135630224 + MER2 DNA MER2_type 129 343 -2 381 43 0 0 chr5 67455308 67455355 -135630177 + (TG)n Simple_repeat Simple_repeat 2 48 0 1369 168 58 4 chr5 67455521 67455795 -135629737 - THE1B LTR MaLR 0 364 76 1225 135 5 0 chr5 67456183 67456383 -135629149 + L1MA4 LINE L1 5461 5661 -643 1258 193 40 3 chr5 67456383 67456682 -135628850 + L1MA4 LINE L1 5984 6294 -6 415 127 28 0 chr5 67457390 67457461 -135628071 - AluS SINE Alu -240 73 1 283 264 80 8 chr5 67457729 67457801 -135627731 - MIR SINE MIR -32 230 165 2139 96 0 3 chr5 67457801 67458117 -135627415 - AluY SINE Alu 0 311 1 283 264 80 8 chr5 67458117 67458169 -135627363 - MIR SINE MIR -97 165 97 197 149 27 27 chr5 67458381 67458455 -135627077 + GA-rich Low_complexity Low_complexity 1 74 0 642 194 50 14 chr5 67458974 67459113 -135626419 + L1MC1 LINE L1 6057 6200 -133 1182 191 17 4 chr5 67459317 67459548 -135625984 + L1MB5 LINE L1 5929 6162 -12 403 301 89 16 chr5 67459578 67459929 -135625603 + L2 LINE L2 2770 3159 -154 314 138 122 0 chr5 67459931 67460054 -135625478 - AluSg/x SINE Alu 0 300 163 6854 138 32 19 chr5 67460468 67460838 -135624694 + Tigger1 DNA MER2_type 507 871 -1547 2030 143 0 0 chr5 67460838 67461132 -135624400 + AluSc SINE Alu 1 294 -15 6854 138 32 19 chr5 67461132 67462009 -135623523 + Tigger1 DNA MER2_type 871 1770 -648 1013 154 80 0 chr5 67462230 67462392 -135623140 - AluJb SINE Alu -137 175 1 650 210 34 52 chr5 67462999 67463232 -135622300 + L1MC4 LINE L1 6961 7189 -853 547 39 26 0 chr5 67463556 67463634 -135621898 + (TAG)n Simple_repeat Simple_repeat 1 80 0 241 224 10 31 chr5 67464600 67464698 -135620834 + A-rich Low_complexity Low_complexity 1 96 0 2089 97 4 4 chr5 67464898 67465176 -135620356 - AluY SINE Alu -33 278 1 707 322 19 8 chr5 67465178 67465442 -135620090 - LTR16B LTR ERVL -197 267 1 248 53 26 0 chr5 67465466 67465504 -135620028 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 457 231 75 52 chr5 67465611 67465784 -135619748 - MIR SINE MIR -82 180 4 2091 119 50 44 chr5 67467574 67467935 -135617597 - THE1B LTR MaLR -1 363 1 497 225 80 40 chr5 67469044 67469335 -135616197 - MLT1D LTR MaLR 0 505 141 209 228 40 20 chr5 67469592 67469693 -135615839 + A-rich Low_complexity Low_complexity 3 105 0 1224 210 15 55 chr5 67470075 67470199 -135615333 - MLT1A1 LTR MaLR -39 326 199 2100 75 3 41 chr5 67470199 67470494 -135615038 - AluY SINE Alu -7 304 21 1224 210 15 55 chr5 67470494 67470697 -135614835 - MLT1A1 LTR MaLR -166 199 12 2443 110 17 0 chr5 67471059 67471414 -135614118 - LTR9 LTR ERV1 -251 361 1 1130 144 0 45 chr5 67471414 67471613 -135613919 + MER1B DNA MER1_type 150 339 0 479 246 68 8 chr5 67471613 67471731 -135613801 - MER5A DNA MER1_type -34 155 31 415 297 7 22 chr5 67472232 67472370 -135613162 + MIR SINE MIR 47 182 -80 2188 124 27 24 chr5 67472481 67472853 -135612679 + THE1C LTR MaLR 1 373 -2 1519 114 0 5 chr5 67472853 67473063 -135612469 + AluSg/x SINE Alu 78 286 -24 1187 196 65 16 chr5 67473590 67473896 -135611636 + MER33 DNA MER1_type 4 324 0 324 0 0 0 chr5 67474012 67474048 -135611484 + (CA)n Simple_repeat Simple_repeat 2 37 0 246 279 44 0 chr5 67474178 67474246 -135611286 + MIR SINE MIR 75 145 -63 208 286 50 50 chr5 67474602 67474721 -135610811 - MIR3 SINE MIR -28 180 62 244 116 0 0 chr5 67474932 67474975 -135610557 - MADE1 DNA Mariner -37 43 1 262 223 165 29 chr5 67477364 67477467 -135608065 - MER5A DNA MER1_type -72 117 1 832 150 0 8 chr5 67477820 67477953 -135607579 - AluSq/x SINE Alu -181 132 1 2096 116 0 10 chr5 67477960 67478261 -135607271 - AluSc SINE Alu -11 298 1 423 333 63 10 chr5 67480394 67480601 -135604931 + MLT1J LTR MaLR 92 309 -202 336 263 38 23 chr5 67480732 67480865 -135604667 + MLT1J LTR MaLR 375 509 -2 211 353 33 49 chr5 67480935 67481184 -135604348 - L2 LINE L2 -351 2921 2673 295 262 56 9 chr5 67481997 67482104 -135603428 - MLT1L LTR MaLR -14 601 490 1016 168 5 10 chr5 67482335 67482532 -135603000 - Tigger5 DNA MER2_type -2 2321 2126 22 0 0 0 chr5 67482812 67482834 -135602698 + AT_rich Low_complexity Low_complexity 1 22 0 370 288 115 47 chr5 67483162 67483353 -135602179 + MIR SINE MIR 3 206 -56 22 56 0 0 chr5 67483389 67483425 -135602107 + AT_rich Low_complexity Low_complexity 1 36 0 738 176 256 5 chr5 67483486 67483685 -135601847 - MLT1D LTR MaLR 0 505 257 369 59 0 0 chr5 67483788 67483839 -135601693 - MADE1 DNA Mariner -28 52 2 2540 47 0 0 chr5 67484223 67484519 -135601013 - AluY SINE Alu -15 296 1 2147 199 62 17 chr5 67484767 67485250 -135600282 + MLT1D LTR MaLR 1 505 0 200 254 42 0 chr5 67485823 67485894 -135599638 + GA-rich Low_complexity Low_complexity 5 78 0 203 167 0 0 chr5 67486604 67486640 -135598892 + (TG)n Simple_repeat Simple_repeat 2 37 0 195 339 24 42 chr5 67487011 67487176 -135598356 + L2 LINE L2 2810 2971 -342 580 338 58 35 chr5 67487313 67487745 -135597787 - L2 LINE L2 -1344 1970 1529 207 346 3 18 chr5 67488409 67488494 -135597038 - MIR SINE MIR -94 114 29 22 0 0 0 chr5 67489072 67489094 -135596438 + AT_rich Low_complexity Low_complexity 1 22 0 505 204 10 0 chr5 67489825 67489923 -135595609 + MER58 DNA MER1_type 2 100 -2320 493 111 33 0 chr5 67489935 67490025 -135595507 + MER58 DNA MER1_type 2319 2411 -9 1402 192 17 4 chr5 67490049 67490349 -135595183 - MER33 DNA MER1_type -28 296 1 3622 24 45 0 chr5 67490953 67491650 -135593882 - L1P1 LINE L1 -562 5593 4870 246 280 88 8 chr5 67491748 67491873 -135593659 - L1ME LINE L1 -5573 497 363 322 261 84 14 chr5 67492053 67492195 -135593337 - L1ME LINE L1 -5905 165 14 2068 125 3 87 chr5 67492333 67492700 -135592832 - MER1B DNA MER1_type -1 336 1 72 40 0 0 chr5 67493677 67493777 -135591755 + AT_rich Low_complexity Low_complexity 1 100 0 201 108 0 0 chr5 67494659 67494696 -135590836 + (T)n Simple_repeat Simple_repeat 1 37 0 272 246 142 15 chr5 67494696 67494830 -135590702 + L2 LINE L2 1630 1780 -1534 473 282 37 31 chr5 67497082 67497245 -135588287 + MIR3 SINE MIR 38 201 -7 613 282 10 20 chr5 67499323 67499525 -135586007 + MIR SINE MIR 43 242 -20 220 122 24 0 chr5 67499909 67499950 -135585582 + T-rich Low_complexity Low_complexity 2 43 0 297 167 0 0 chr5 67500951 67501005 -135584527 + (TA)n Simple_repeat Simple_repeat 2 55 0 2288 99 3 0 chr5 67501160 67501464 -135584068 - AluSx SINE Alu -7 305 1 1217 110 12 6 chr5 67501628 67501801 -135583731 + AluSp SINE Alu 126 299 -14 308 361 25 32 chr5 67502892 67503050 -135582482 + L1ME LINE L1 5495 5651 -470 1518 214 32 30 chr5 67506339 67506708 -135578824 - MLT1A2 LTR MaLR -4 370 1 927 177 113 16 chr5 67510514 67510700 -135574832 - AluJb SINE Alu -11 301 98 210 128 0 0 chr5 67512117 67512156 -135573376 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 2217 114 0 43 chr5 67513495 67513819 -135571713 - AluSg SINE Alu 0 310 1 265 327 144 0 chr5 67514147 67514251 -135571281 - MIR3 SINE MIR -49 159 41 264 194 30 0 chr5 67515533 67515600 -135569932 - L1MEc LINE L1 -5501 895 827 189 222 0 0 chr5 67517064 67517127 -135568405 + T-rich Low_complexity Low_complexity 1 63 0 227 157 20 0 chr5 67517803 67517854 -135567678 + (TA)n Simple_repeat Simple_repeat 1 52 0 24 0 0 0 chr5 67518234 67518258 -135567274 + AT_rich Low_complexity Low_complexity 1 24 0 460 236 150 29 chr5 67518840 67518980 -135566552 - L2 LINE L2 0 3272 3116 2349 161 44 29 chr5 67519232 67519759 -135565773 - L1MB2 LINE L1 -10 6161 5627 1297 107 10 15 chr5 67520829 67521025 -135564507 - L1PA10 LINE L1 -3 6165 5971 1556 256 136 45 chr5 67521132 67521598 -135563934 - L2 LINE L2 -30 3283 2861 1473 104 198 30 chr5 67521598 67521866 -135563666 - AluSq SINE Alu 0 313 1 1556 256 136 45 chr5 67521866 67522393 -135563139 - L2 LINE L2 -452 2861 2186 806 233 97 5 chr5 67523732 67523938 -135561594 - MIR SINE MIR -6 256 32 214 172 0 52 chr5 67524215 67524273 -135561259 + (TATG)n Simple_repeat Simple_repeat 2 56 0 257 242 0 0 chr5 67524344 67524406 -135561126 - MLT1J LTR MaLR -197 314 253 406 193 0 24 chr5 67525731 67525814 -135559718 - Tigger5 DNA MER2_type -1 2322 2242 439 165 31 0 chr5 67525822 67525919 -135559613 - L1MA4A LINE L1 -23 6280 6181 3862 153 150 18 chr5 67525922 67527263 -135558269 - L1MA4A LINE L1 -187 6116 4584 4104 117 1 60 chr5 67527271 67527987 -135557545 - THE1C-int LTR MaLR -904 676 3 1475 148 133 21 chr5 67527989 67528326 -135557206 - THE1C LTR MaLR 0 375 1 1371 189 87 0 chr5 67528575 67528850 -135556682 + AluJo SINE Alu 3 301 -11 481 15 46 0 chr5 67529874 67529939 -135555593 - MADE1 DNA Mariner 0 80 13 398 276 245 6 chr5 67529941 67530104 -135555428 - MIR SINE MIR -59 203 2 666 301 138 24 chr5 67530308 67530896 -135554636 + HAL1b LINE L1 149 803 -545 21 36 0 0 chr5 67531010 67531038 -135554494 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 67531323 67531344 -135554188 + AT_rich Low_complexity Low_complexity 1 21 0 204 266 165 0 chr5 67532402 67532481 -135553051 - MIR SINE MIR -14 248 157 184 273 0 0 chr5 67532566 67532610 -135552922 - MIR SINE MIR -70 192 149 198 114 0 57 chr5 67533550 67533585 -135551947 - MIR SINE MIR -148 114 82 3031 183 52 2 chr5 67533740 67534373 -135551159 - L1MB7 LINE L1 0 6184 5520 265 273 127 18 chr5 67534410 67534520 -135551012 + MIR SINE MIR 129 250 -12 714 172 19 19 chr5 67534999 67535148 -135550384 - MSTD LTR MaLR 0 396 263 1975 151 55 25 chr5 67536311 67536675 -135548857 - THE1C LTR MaLR 0 375 1 338 357 25 0 chr5 67536679 67536836 -135548696 - MIR SINE MIR -29 233 73 268 272 87 0 chr5 67538964 67539067 -135546465 + MIR3 SINE MIR 70 181 -27 459 288 14 50 chr5 67539598 67539737 -135545795 + L2 LINE L2 3133 3266 -6 236 314 161 47 chr5 67539896 67539946 -135545586 + L2 LINE L2 2804 2847 -425 871 178 112 5 chr5 67539946 67540143 -135545389 - MER20 DNA MER1_type -1 218 1 236 314 161 47 chr5 67540143 67540328 -135545204 + L2 LINE L2 2847 3066 -206 870 144 6 12 chr5 67540531 67540704 -135544828 + CT-rich Low_complexity Low_complexity 4 175 0 1991 122 13 6 chr5 67540704 67541015 -135544517 - AluSp SINE Alu 0 313 1 576 106 0 0 chr5 67541017 67541102 -135544430 + (TTCCC)n Simple_repeat Simple_repeat 2 86 0 1524 164 26 46 chr5 67541102 67541406 -135544126 - AluJo SINE Alu -14 298 1 198 329 122 59 chr5 67541433 67541655 -135543877 + L3 LINE CR1 1331 1566 -11 1218 249 86 3 chr5 67541890 67542251 -135543281 + LTR16A LTR ERVL 60 450 0 2245 161 82 7 chr5 67544540 67544957 -135540575 + MLT1C LTR MaLR 20 467 0 742 309 82 42 chr5 67545095 67545548 -135539984 - L2 LINE L2 -5 3308 2838 194 259 9 111 chr5 67546377 67546485 -135539047 - L2 LINE L2 -49 3223 3127 1609 130 4 40 chr5 67546975 67547102 -135538430 + AluJb SINE Alu 1 131 -181 2116 98 0 32 chr5 67547102 67547443 -135538089 + AluSx SINE Alu 1 312 0 1609 130 4 40 chr5 67547443 67547591 -135537941 + AluJb SINE Alu 131 266 -46 927 202 0 12 chr5 67548544 67548712 -135536820 + FRAM SINE Alu 1 166 0 1147 291 78 27 chr5 67548845 67549292 -135536240 - MLT1J LTR MaLR -38 473 4 189 195 0 0 chr5 67549777 67549818 -135535714 + (TG)n Simple_repeat Simple_repeat 2 42 0 772 191 22 0 chr5 67551267 67551403 -135534129 - MER63A DNA MER1_type 0 210 72 2171 104 10 0 chr5 67552191 67552490 -135533042 + AluSx SINE Alu 1 302 -10 621 260 57 48 chr5 67553036 67553263 -135532269 + MIR SINE MIR 34 262 0 195 250 0 90 chr5 67553338 67553438 -135532094 + L2 LINE L2 2926 3016 -256 206 289 133 59 chr5 67553617 67554039 -135531493 - L2 LINE L2 -1027 2287 1835 812 147 8 8 chr5 67554068 67554197 -135531335 + AluJb SINE Alu 1 129 -183 250 65 22 22 chr5 67554480 67554526 -135531006 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 215 152 22 0 chr5 67554541 67554587 -135530945 + (TCCA)n Simple_repeat Simple_repeat 1 47 0 208 309 171 0 chr5 67554594 67554717 -135530815 - L2 LINE L2 0 3313 3170 380 270 181 15 chr5 67555500 67555704 -135529828 - MLT1L LTR MaLR -14 601 364 2174 161 0 6 chr5 67555843 67556209 -135529323 - MER47A DNA MER2_type -2 364 1 1589 182 10 32 chr5 67556334 67556647 -135528885 + AluJo SINE Alu 1 306 -6 1701 179 16 0 chr5 67557674 67557981 -135527551 - AluJo SINE Alu 0 312 1 1693 173 7 0 chr5 67558108 67558418 -135527114 - AluJb SINE Alu 0 312 1 299 268 205 0 chr5 67558427 67558539 -135526993 - MIR SINE MIR -73 189 55 186 133 0 0 chr5 67559325 67559355 -135526177 + (A)n Simple_repeat Simple_repeat 1 30 0 465 324 86 31 chr5 67559817 67560073 -135525459 - MLT1L LTR MaLR -129 486 217 423 264 54 36 chr5 67560049 67560216 -135525316 - MLT1J LTR MaLR -335 176 7 * 371 203 0 0 chr5 67560246 67560315 -135525217 - LTR33A LTR ERVL -9 514 446 15257 122 22 26 chr5 67560464 67562882 -135522650 + Tigger1 DNA MER2_type 11 2418 0 225 65 0 0 chr5 67562936 67562967 -135522565 + (CTG)n Simple_repeat Simple_repeat 3 33 0 244 263 40 40 chr5 67563154 67563253 -135522279 - LTR33A LTR ERVL -361 162 64 801 134 0 0 chr5 67564118 67564245 -135521287 + AluSp/q SINE Alu 186 312 -1 578 284 131 57 chr5 67564562 67564864 -135520668 - MLT1G3 LTR MaLR -238 317 10 222 326 0 54 chr5 67564906 67565002 -135520530 - MIR SINE MIR -102 106 15 1209 229 63 60 chr5 67565751 67566214 -135519318 - MLT2C2 LTR ERVL 0 464 1 477 316 23 47 chr5 67566421 67566636 -135518896 + L2 LINE L2 2820 3029 -243 198 217 167 0 chr5 67566635 67566695 -135518837 + MIR SINE MIR 183 252 -10 * 468 325 132 30 chr5 67566734 67567174 -135518358 - L2 LINE L2 0 3313 2829 267 325 181 0 chr5 67567186 67567352 -135518180 + L2 LINE L2 3076 3271 -1 275 279 50 50 chr5 67567377 67567517 -135518015 + L2 LINE L2 3133 3272 0 564 273 58 0 chr5 67568507 67568661 -135516871 - MER5B DNA MER1_type -15 163 1 488 348 14 5 chr5 67569194 67569404 -135516128 + MIR SINE MIR 50 261 -1 277 168 19 206 chr5 67569531 67569638 -135515894 - MER5B DNA MER1_type -88 90 4 25 75 0 0 chr5 67569805 67569858 -135515674 + AT_rich Low_complexity Low_complexity 1 53 0 341 295 93 22 chr5 67569982 67570121 -135515411 - L1ME4a LINE L1 -224 5897 5749 2399 179 26 20 chr5 67570122 67570581 -135514951 - MLT1C LTR MaLR 0 467 6 1634 168 46 9 chr5 67571165 67571510 -135514022 + MER58D DNA MER1_type 1 358 -28 906 208 11 22 chr5 67571522 67571705 -135513827 - MER5A DNA MER1_type -8 181 1 664 227 12 35 chr5 67571799 67571971 -135513561 + MIR SINE MIR 59 226 -36 481 317 82 29 chr5 67572942 67573150 -135512382 - MIR SINE MIR -6 256 38 642 174 145 22 chr5 67573594 67573732 -135511800 + MIR SINE MIR 21 175 -87 408 71 0 0 chr5 67574426 67574482 -135511050 + (TAA)n Simple_repeat Simple_repeat 3 58 0 1612 258 42 27 chr5 67574585 67575065 -135510467 + LTR16C LTR ERVL 4 490 -1 418 282 184 49 chr5 67575065 67575546 -135509986 - MLT1K LTR MaLR -40 548 2 502 331 8 0 chr5 67576799 67576926 -135508606 - MER91A DNA MER1_type -50 146 19 684 211 30 80 chr5 67576992 67577191 -135508341 + MER5A DNA MER1_type 1 189 0 183 80 0 0 chr5 67578058 67578083 -135507449 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 238 269 152 70 chr5 67578336 67578507 -135507025 + MIR SINE MIR 72 256 -6 231 36 0 0 chr5 67578544 67578572 -135506960 + (TTATG)n Simple_repeat Simple_repeat 3 30 0 484 279 44 65 chr5 67578593 67578742 -135506790 + MIR SINE MIR 11 155 -107 1994 60 45 0 chr5 67578742 67579007 -135506525 - AluY SINE Alu -12 299 23 484 279 44 65 chr5 67579007 67579086 -135506446 + MIR SINE MIR 155 234 -28 244 347 32 0 chr5 67579158 67579253 -135506279 - L2 LINE L2 -38 3234 3137 270 213 133 13 chr5 67579554 67579629 -135505903 + L2 LINE L2 3229 3312 -1 182 268 52 93 chr5 67580294 67580391 -135505141 + L2 LINE L2 2949 3041 -272 339 321 130 0 chr5 67580800 67580931 -135504601 - MER91A DNA MER1_type -34 162 15 204 163 23 0 chr5 67580980 67581023 -135504509 + (TTA)n Simple_repeat Simple_repeat 3 46 0 899 230 11 37 chr5 67581956 67582606 -135502926 - L1MC4 LINE L1 -26 8016 7280 207 100 0 0 chr5 67583744 67583774 -135501758 + (GA)n Simple_repeat Simple_repeat 1 30 0 199 309 62 12 chr5 67583963 67584044 -135501488 + L2 LINE L2 2610 2694 -620 941 197 78 14 chr5 67584187 67584405 -135501127 - MIR SINE MIR -8 254 23 664 250 97 57 chr5 67584474 67584722 -135500810 - MIR SINE MIR -1 261 4 243 0 0 0 chr5 67585731 67585758 -135499774 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 454 251 111 35 chr5 67585761 67585932 -135499600 - L2 LINE L2 -16 3297 3114 462 322 158 35 chr5 67586422 67586826 -135498706 - L2 LINE L2 -1 3271 2818 1401 165 0 0 chr5 67586946 67587176 -135498356 - AluJb SINE Alu -82 230 1 403 234 22 0 chr5 67587248 67587353 -135498179 - L1ME LINE L1 -359 5803 5695 318 273 45 0 chr5 67587394 67587504 -135498028 - MIR SINE MIR -147 115 1 218 313 33 80 chr5 67587590 67587740 -135497792 - MER5A DNA MER1_type -30 159 17 594 184 109 20 chr5 67588228 67588375 -135497157 - MER5B DNA MER1_type -18 160 1 194 298 96 32 chr5 67588949 67589043 -135496489 + MIR3 SINE MIR 106 205 -3 2080 113 7 3 chr5 67589252 67589562 -135495970 + AluSx SINE Alu 1 311 -1 524 299 105 34 chr5 67590009 67590334 -135495198 - MLT1L LTR MaLR -4 611 264 281 239 201 19 chr5 67592020 67592179 -135493353 - LTR33 LTR ERVL -10 511 324 540 217 93 68 chr5 67592199 67592360 -135493172 - LTR33 LTR ERVL -319 202 11 1106 266 8 0 chr5 67593073 67593310 -135492222 - MIR SINE MIR -3 259 21 273 290 19 37 chr5 67593381 67593488 -135492044 - MIR3 SINE MIR -16 192 88 1598 267 47 20 chr5 67594847 67595353 -135490179 - LTR33 LTR ERVL -1 520 1 595 182 172 57 chr5 67595592 67595784 -135489748 + MER20 DNA MER1_type 2 215 -4 21 57 0 0 chr5 67596590 67596625 -135488907 + AT_rich Low_complexity Low_complexity 1 35 0 1242 68 193 0 chr5 67596677 67596869 -135488663 - MER30 DNA MER1_type -1 229 1 324 283 113 13 chr5 67596948 67597134 -135488398 - L1MC4a LINE L1 -155 5966 5762 251 254 14 14 chr5 67597497 67597568 -135487964 + MIR SINE MIR 81 151 -111 22 0 0 0 chr5 67598106 67598128 -135487404 + AT_rich Low_complexity Low_complexity 1 22 0 370 310 108 66 chr5 67599758 67600139 -135485393 - L1ME4a LINE L1 0 6121 5725 189 74 0 0 chr5 67600140 67600167 -135485365 + (T)n Simple_repeat Simple_repeat 1 27 0 428 278 58 30 chr5 67600212 67600550 -135484982 - L1ME4a LINE L1 -444 5677 5197 11920 83 11 0 chr5 67600579 67602955 -135482577 + L1PA7 LINE L1 3765 6152 -2 1958 128 0 3 chr5 67603011 67603299 -135482233 - AluSx SINE Alu -25 287 1 516 222 98 72 chr5 67603582 67603776 -135481756 + MIR SINE MIR 48 246 -16 466 274 185 7 chr5 67604679 67604825 -135480707 - MER5B DNA MER1_type 0 178 7 579 228 208 0 chr5 67604912 67605061 -135480471 - MER5A DNA MER1_type -1 188 9 356 247 21 52 chr5 67605109 67605206 -135480326 - MER5A DNA MER1_type -89 100 7 204 311 89 11 chr5 67607061 67607151 -135478381 + L2 LINE L2 3187 3283 -30 783 277 40 25 chr5 67607373 67607739 -135477793 + MLT1L LTR MaLR 174 603 -12 1673 203 143 31 chr5 67608807 67608879 -135476653 - MLT1D LTR MaLR 0 505 442 1893 191 20 23 chr5 67608879 67609276 -135476256 + MSTD LTR MaLR 1 396 0 1673 203 143 31 chr5 67609276 67609657 -135475875 - MLT1D LTR MaLR -63 442 1 378 238 48 0 chr5 67609664 67609748 -135475784 + MIR SINE MIR 110 197 -65 191 200 22 22 chr5 67609923 67609968 -135475564 + L2 LINE L2 3261 3305 -8 2396 38 0 3 chr5 67611573 67611866 -135473666 - AluY SINE Alu -6 305 14 806 179 12 12 chr5 67612251 67612424 -135473108 + MER53 DNA DNA 5 177 -12 195 274 0 16 chr5 67612954 67613016 -135472516 - L3b LINE CR1 -198 1385 1325 349 318 32 37 chr5 67613635 67613824 -135471708 + MER5A DNA MER1_type 2 189 0 250 325 243 12 chr5 67614774 67615103 -135470429 - L3 LINE CR1 -10 1567 1163 2379 162 46 17 chr5 67615641 67616055 -135469477 + MSTB LTR MaLR 1 426 0 1372 286 116 57 chr5 67616474 67617212 -135468320 - L2 LINE L2 -826 2488 1652 1970 121 7 0 chr5 67617212 67617494 -135468038 + AluSx SINE Alu 3 286 -26 1372 286 116 57 chr5 67617494 67617937 -135467595 - L2 LINE L2 -1662 1652 1237 270 332 101 23 chr5 67617975 67618192 -135467340 + L2 LINE L2 3080 3313 0 180 191 0 48 chr5 67618304 67618346 -135467186 - L2 LINE L2 -1062 2252 2213 814 189 72 22 chr5 67618445 67618667 -135466865 - MER20B DNA MER1_type -6 777 545 436 243 186 7 chr5 67618671 67618811 -135466721 - MER5A DNA MER1_type -6 183 19 1805 200 101 16 chr5 67618960 67619406 -135466126 - MER20B DNA MER1_type -264 519 36 404 348 88 81 chr5 67619832 67620274 -135465258 + L2 LINE L2 2826 3270 -2 26 0 0 0 chr5 67620291 67620317 -135465215 + AT_rich Low_complexity Low_complexity 1 26 0 258 233 137 0 chr5 67620704 67620777 -135464755 + MIR SINE MIR 87 169 -93 295 246 31 0 chr5 67620988 67621053 -135464479 - L2 LINE L2 -17 3296 3230 200 301 145 0 chr5 67621094 67621177 -135464355 - L2 LINE L2 -223 3090 2996 1658 175 10 19 chr5 67621179 67621488 -135464044 + AluJo SINE Alu 1 306 -6 227 274 206 0 chr5 67621534 67621607 -135463925 - MIR SINE MIR -64 198 111 1052 295 84 10 chr5 67621849 67622314 -135463218 + L2 LINE L2 2514 3060 -253 1341 250 97 39 chr5 67622400 67622959 -135462573 + MLT1E LTR MaLR 3 593 0 408 266 131 31 chr5 67624439 67624661 -135460871 - MLT1L LTR MaLR -8 607 364 296 240 20 40 chr5 67624736 67624836 -135460696 - MLT1J1 LTR MaLR -301 145 48 432 269 19 9 chr5 67625321 67625429 -135460103 + MER5B DNA MER1_type 1 109 -69 2514 185 89 138 chr5 67625436 67626545 -135458987 + MER63D DNA MER1_type 7 1061 0 269 158 18 18 chr5 67626545 67626602 -135458930 + MER5B DNA MER1_type 104 160 -18 199 262 0 0 chr5 67626896 67626938 -135458594 + MIR SINE MIR 210 251 -11 2146 112 0 0 chr5 67627023 67627318 -135458214 - AluSx SINE Alu -15 297 3 814 278 89 3 chr5 67627422 67627735 -135457797 + LTR33A LTR ERVL 130 469 -54 631 273 102 37 chr5 67628112 67628522 -135457010 - LTR33 LTR ERVL -8 513 77 285 313 61 8 chr5 67628828 67628959 -135456573 + MIR3 SINE MIR 68 205 -3 359 326 97 17 chr5 67632843 67633018 -135452514 - MER5A DNA MER1_type 0 189 1 243 0 0 0 chr5 67633115 67633142 -135452390 + (TC)n Simple_repeat Simple_repeat 2 28 0 564 53 0 0 chr5 67633158 67633234 -135452298 + (GA)n Simple_repeat Simple_repeat 1 76 0 221 170 85 0 chr5 67633797 67633844 -135451688 - L2 LINE L2 -39 3233 3183 424 280 88 8 chr5 67636330 67636519 -135449013 - MIR3 SINE MIR -46 162 1 513 158 84 0 chr5 67636738 67636833 -135448699 - U6 snRNA snRNA 0 107 5 495 201 109 29 chr5 67636836 67637010 -135448522 - MER112 DNA MER1_type -72 188 1 470 273 20 0 chr5 67637046 67637196 -135448336 + MIR3 SINE MIR 49 201 -7 23 33 0 0 chr5 67638343 67638373 -135447159 + AT_rich Low_complexity Low_complexity 1 30 0 216 171 26 66 chr5 67638759 67638835 -135446697 + A-rich Low_complexity Low_complexity 6 78 0 323 296 0 0 chr5 67639483 67639571 -135445961 - L1MC4 LINE L1 -1340 6702 6615 224 146 98 0 chr5 67640291 67640332 -135445200 + MIR3 SINE MIR 121 165 -43 382 290 218 15 chr5 67640366 67640701 -135444831 - L2 LINE L2 0 3313 2911 255 303 84 17 chr5 67640868 67640987 -135444545 - MLT1I LTR MaLR -3 406 280 484 335 58 31 chr5 67642313 67642638 -135442894 + L2 LINE L2 2840 3173 -99 2415 153 44 7 chr5 67642650 67643061 -135442471 - MSTB LTR MaLR 0 426 1 2140 113 3 10 chr5 67644387 67644706 -135440826 - AluSq SINE Alu 0 313 1 1235 203 106 9 chr5 67644873 67645193 -135440339 - LTR50 LTR ERVL -39 756 406 213 39 0 0 chr5 67645541 67645567 -135439965 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 234 0 0 0 chr5 67645566 67645592 -135439940 + (GA)n Simple_repeat Simple_repeat 1 26 0 301 263 119 17 chr5 67646486 67646604 -135438928 - L2 LINE L2 0 3313 3184 520 242 34 34 chr5 67646881 67647030 -135438502 - LTR67 LTR ERVL -1 556 408 195 359 19 29 chr5 67647591 67647694 -135437838 - MIR SINE MIR -67 141 40 1636 214 80 44 chr5 67649134 67649942 -135435590 + MER97a DNA MER1_type? 10 894 0 297 313 30 0 chr5 67650213 67650312 -135435220 - LTR67 LTR ERVL -352 205 104 258 32 0 0 chr5 67650539 67650570 -135434962 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 1873 151 0 14 chr5 67650570 67650854 -135434678 - AluJb SINE Alu -32 280 1 249 152 0 0 chr5 67651527 67651572 -135433960 + MIR SINE MIR 73 118 -90 297 0 0 0 chr5 67651979 67652012 -135433520 + (CA)n Simple_repeat Simple_repeat 1 33 0 209 280 0 0 chr5 67652370 67652420 -135433112 + CT-rich Low_complexity Low_complexity 1 50 0 219 300 108 50 chr5 67653446 67653686 -135431846 + L2 LINE L2 2553 2806 -508 441 223 230 7 chr5 67653697 67653845 -135431687 + MER5A DNA MER1_type 3 183 -6 639 103 0 0 chr5 67656577 67656674 -135428858 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 1050 218 130 90 chr5 67658047 67658579 -135426953 + MLT1H1 LTR MaLR 3 555 0 258 132 0 0 chr5 67661373 67661426 -135424106 + (A)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr5 67662487 67662511 -135423021 + AT_rich Low_complexity Low_complexity 1 24 0 396 197 49 8 chr5 67663596 67663718 -135421814 + L1ME1 LINE L1 3108 3234 -2912 312 158 0 0 chr5 67663758 67663815 -135421717 + GA-rich Low_complexity Low_complexity 2 58 0 931 262 43 11 chr5 67663893 67664261 -135421271 + L1ME1 LINE L1 3292 3665 -2481 458 194 61 97 chr5 67664269 67664465 -135421067 - L1M4 LINE L1 -2984 3162 2974 2582 248 83 42 chr5 67664509 67665473 -135420059 + L1ME1 LINE L1 3657 4659 -1487 * 5210 184 41 19 chr5 67665460 67666576 -135418956 - L1MB1 LINE L1 -1234 4912 3772 1859 205 48 11 chr5 67666577 67667011 -135418521 + L1MB1 LINE L1 4915 5365 -777 2708 166 23 12 chr5 67667011 67667498 -135418034 + L1MB1 LINE L1 5677 6168 0 2412 217 27 69 chr5 67667548 67668660 -135416872 + L1ME1 LINE L1 4644 5708 -743 495 144 0 17 chr5 67668660 67668862 -135416670 - AluJb SINE Alu -20 292 44 992 201 154 81 chr5 67668891 67669067 -135416465 + L1ME1 LINE L1 5703 5865 -301 2472 76 0 0 chr5 67669067 67669369 -135416163 + AluY SINE Alu 1 302 -9 992 201 154 81 chr5 67669369 67669463 -135416069 + L1ME1 LINE L1 5865 5951 -215 1954 140 0 3 chr5 67669463 67669777 -135415755 + AluSx SINE Alu 1 313 0 992 201 154 81 chr5 67669777 67669887 -135415645 + L1ME1 LINE L1 5951 6113 -53 957 308 142 10 chr5 67670220 67670843 -135414689 + L2 LINE L2 2444 3144 -169 815 275 73 50 chr5 67670856 67671334 -135414198 + L2 LINE L2 2748 3244 -69 231 196 20 0 chr5 67671506 67671557 -135413975 + L2 LINE L2 3262 3313 0 234 324 45 36 chr5 67671795 67672042 -135413490 + L2 LINE L2 2848 3096 -176 2549 61 0 0 chr5 67672200 67672495 -135413037 + AluY SINE Alu 1 295 -16 508 262 103 0 chr5 67673228 67673373 -135412159 + MER5B DNA MER1_type 19 178 0 1486 112 36 5 chr5 67673446 67673669 -135411863 - MER30 DNA MER1_type 0 230 1 312 270 7 66 chr5 67673687 67673824 -135411708 + MLT1E LTR MaLR 1 129 -464 364 113 42 0 chr5 67675705 67675776 -135409756 + CT-rich Low_complexity Low_complexity 4 77 0 1681 185 23 0 chr5 67675779 67676044 -135409488 - AluJb SINE Alu -39 273 3 2348 107 0 0 chr5 67677279 67677588 -135407944 - AluSg SINE Alu -1 309 1 426 273 61 8 chr5 67678741 67678873 -135406659 + L1ME LINE L1 5686 5824 -297 319 256 60 30 chr5 67679297 67679430 -135406102 - LTR33A LTR ERVL -94 429 293 355 315 154 0 chr5 67679510 67679659 -135405873 - LTR33 LTR ERVL -322 199 28 350 191 32 43 chr5 67680124 67680218 -135405314 - MIR SINE MIR -38 224 132 * 679 233 171 0 chr5 67680217 67680410 -135405122 + MIR SINE MIR 13 238 -24 421 299 14 27 chr5 67680415 67680562 -135404970 - MIR SINE MIR -116 146 2 250 209 0 90 chr5 67681812 67681879 -135403653 + MIR3 SINE MIR 122 182 -26 6265 132 5 11 chr5 67682074 67683656 -135401876 + L1PA10 LINE L1 4142 5670 -498 2855 51 0 6 chr5 67683656 67683992 -135401540 - L1PA6 LINE L1 -2 6152 5819 4009 86 16 0 chr5 67683992 67684500 -135401032 + L1PA10 LINE L1 5646 6166 -2 402 318 146 0 chr5 67684561 67684712 -135400820 - MER91A DNA MER1_type -20 176 4 261 83 0 0 chr5 67684795 67684831 -135400701 + (CA)n Simple_repeat Simple_repeat 2 37 0 1391 324 108 20 chr5 67685240 67685996 -135399536 - ERVL LTR ERVL -1289 4475 3787 2061 109 28 0 chr5 67685996 67686279 -135399253 + AluSx SINE Alu 1 291 -21 1391 324 108 20 chr5 67686279 67686838 -135398694 - ERVL LTR ERVL -1977 3787 2977 565 198 66 8 chr5 67686845 67686966 -135398566 + MLT1G LTR MaLR 2 129 -461 208 200 36 0 chr5 67686967 67687022 -135398510 + (CTATA)n Simple_repeat Simple_repeat 4 60 0 * 238 145 32 32 chr5 67687008 67687070 -135398462 + (TA)n Simple_repeat Simple_repeat 1 62 0 1539 266 75 18 chr5 67687082 67687387 -135398145 + MLT1G LTR MaLR 104 452 -138 1049 206 5 10 chr5 67687387 67687591 -135397941 - MER105 DNA DNA -1 203 1 1539 266 75 18 chr5 67687591 67687739 -135397793 + MLT1G LTR MaLR 452 590 0 1969 294 55 38 chr5 67687752 67688591 -135396941 - ERVL LTR ERVL -2799 2965 2113 480 340 78 51 chr5 67688625 67689511 -135396021 - ERVL LTR ERVL -4048 1716 807 960 277 143 51 chr5 67689849 67690394 -135395138 + MLT1G1 LTR MaLR 1 595 0 308 167 24 36 chr5 67690751 67690835 -135394697 + L1MA10 LINE L1 6252 6334 0 770 252 44 26 chr5 67690839 67691065 -135394467 + MIR SINE MIR 32 261 -1 610 270 57 6 chr5 67691275 67691471 -135394061 + MIR SINE MIR 2 204 -51 243 211 0 35 chr5 67691493 67691550 -135393982 + MLT1F LTR MaLR 5 59 -483 228 290 58 14 chr5 67691656 67691725 -135393807 + MLT1F LTR MaLR 124 195 -360 826 245 5 11 chr5 67691917 67692101 -135393431 + MLT1G LTR MaLR 408 590 0 530 307 65 63 chr5 67693040 67693437 -135392095 + L3 LINE CR1 751 1148 -429 447 343 107 63 chr5 67693466 67694123 -135391409 - L2 LINE L2 -4 3268 2560 476 205 6 90 chr5 67694219 67694385 -135391147 + L2 LINE L2 3112 3263 -50 193 327 18 0 chr5 67694400 67694455 -135391077 + L3 LINE CR1 1267 1322 -255 1785 229 104 4 chr5 67694455 67694956 -135390576 + L1M4 LINE L1 4022 4572 -1574 * 3485 248 109 31 chr5 67694950 67695870 -135389662 - L1MEc LINE L1 -4040 2356 1509 2063 117 43 0 chr5 67695870 67696169 -135389363 - AluSp SINE Alu -1 312 1 3485 248 109 31 chr5 67696169 67697405 -135388127 - L1MEc LINE L1 -4887 1509 37 304 337 139 23 chr5 67697577 67697749 -135387783 + L3 LINE CR1 1322 1513 -64 203 333 32 39 chr5 67697979 67698131 -135387401 - MIR SINE MIR -62 146 3 953 203 0 11 chr5 67698922 67699099 -135386433 + FRAM SINE Alu 1 40 0 201 242 16 16 chr5 67699178 67699240 -135386292 + CT-rich Low_complexity Low_complexity 1 62 0 898 193 98 46 chr5 67699526 67699811 -135385721 - MER113 DNA MER1_type? -98 423 124 183 298 0 0 chr5 67700209 67700256 -135385276 + L3 LINE CR1 1523 1569 -8 186 286 18 0 chr5 67700693 67700749 -135384783 + MIR SINE MIR 11 67 -195 210 320 177 27 chr5 67700905 67701052 -135384480 - MER91A DNA MER1_type -27 169 1 393 374 40 4 chr5 67701089 67701316 -135384216 - L2 LINE L2 -602 2712 2478 259 313 188 0 chr5 67701620 67701748 -135383784 + MER5B DNA MER1_type 27 178 0 * 301 322 164 12 chr5 67701748 67701912 -135383620 + MIR SINE MIR 15 204 -58 336 227 113 21 chr5 67702109 67702206 -135383326 - MIR SINE MIR -122 140 35 2267 147 56 0 chr5 67702746 67703120 -135382412 - MSTB LTR MaLR 0 426 32 22 0 0 0 chr5 67703531 67703553 -135381979 + AT_rich Low_complexity Low_complexity 1 22 0 568 159 14 37 chr5 67703829 67704181 -135381351 + GA-rich Low_complexity Low_complexity 1 344 0 624 163 35 0 chr5 67704224 67704396 -135381136 + GA-rich Low_complexity Low_complexity 2 179 0 307 214 0 0 chr5 67706629 67706685 -135378847 + L2 LINE L2 3209 3264 -8 180 240 120 40 chr5 67706876 67706951 -135378581 + MIR SINE MIR 66 146 -62 213 243 71 43 chr5 67707928 67707998 -135377534 - L2 LINE L2 0 3272 3201 896 216 50 6 chr5 67708229 67708410 -135377122 + MER5A DNA MER1_type 1 189 0 387 0 0 0 chr5 67709522 67709565 -135375967 + (TG)n Simple_repeat Simple_repeat 1 43 0 29 0 0 0 chr5 67711492 67711521 -135374011 + AT_rich Low_complexity Low_complexity 1 29 0 284 320 189 0 chr5 67712680 67712833 -135372699 - MIR SINE MIR -58 204 23 1743 216 127 10 chr5 67713690 67714101 -135371431 + L1MC4 LINE L1 6461 6919 -1123 403 310 18 0 chr5 67714549 67714662 -135370870 + MIR3 SINE MIR 60 174 -34 21 0 0 0 chr5 67715140 67715161 -135370371 + AT_rich Low_complexity Low_complexity 1 21 0 210 271 34 0 chr5 67715269 67715328 -135370204 + MIR SINE MIR 164 224 -38 2015 246 108 79 chr5 67715339 67716677 -135368855 + L1MC4 LINE L1 6515 7885 -110 1502 201 110 38 chr5 67716678 67717077 -135368455 + MLT1D LTR MaLR 37 464 -41 4654 167 53 20 chr5 67717376 67718232 -135367300 + MER54A LTR ERVL 1 884 -17 250 235 168 8 chr5 67718246 67718365 -135367167 + LTR33 LTR ERVL 112 249 -272 257 259 157 28 chr5 67718408 67718516 -135367016 + MER5A DNA MER1_type 3 124 -65 561 236 104 7 chr5 67718527 67718671 -135366861 + LTR33 LTR ERVL 254 411 -110 2976 176 84 3 chr5 67718899 67719467 -135366065 - MER90 LTR ERV1 0 614 1 419 305 26 32 chr5 67719497 67719651 -135365881 + MER5A DNA MER1_type 35 187 -2 245 286 0 0 chr5 67719967 67720030 -135365502 + GA-rich Low_complexity Low_complexity 2 64 0 2438 82 0 0 chr5 67720204 67720509 -135365023 - AluY SINE Alu -6 305 1 278 115 19 0 chr5 67721133 67721185 -135364347 + CT-rich Low_complexity Low_complexity 2 54 0 432 0 0 0 chr5 67721498 67721546 -135363986 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 2204 122 0 0 chr5 67721943 67722239 -135363293 - AluSc SINE Alu -13 296 1 621 281 98 9 chr5 67722351 67722744 -135362788 - L1MEc LINE L1 -3656 2559 2173 260 279 0 0 chr5 67722786 67722865 -135362667 - L1MEc LINE L1 -4997 1208 1130 725 335 16 38 chr5 67722866 67723236 -135362296 + ERVL LTR ERVL 4827 5188 -576 2195 194 35 23 chr5 67723392 67723819 -135361713 - Tigger2a DNA MER2_type 0 434 3 1130 328 32 5 chr5 67724023 67724423 -135361109 + LTR16A LTR ERVL 25 435 -15 861 339 69 28 chr5 67724512 67725090 -135360442 - L1MEc LINE L1 -5415 790 189 562 278 38 15 chr5 67725334 67725467 -135360065 + L2 LINE L2 3137 3272 0 246 276 127 37 chr5 67725627 67725761 -135359771 - L2 LINE L2 -9 3304 3159 438 274 18 0 chr5 67725772 67725885 -135359647 - MER94 DNA DNA 0 134 20 569 329 180 12 chr5 67726047 67726536 -135358996 - L2 LINE L2 -339 2975 2405 524 282 117 5 chr5 67726707 67726895 -135358637 - MLT1L LTR MaLR -2 613 405 405 0 0 0 chr5 67729175 67729220 -135356312 + (TG)n Simple_repeat Simple_repeat 1 45 0 2492 147 7 5 chr5 67729404 67729811 -135355721 - L1MA4 LINE L1 -1 6299 5892 735 288 98 4 chr5 67729811 67730075 -135355457 - MLT1J2 LTR MaLR -161 289 1 2447 218 44 13 chr5 67730399 67730923 -135354609 - MLT1F LTR MaLR -2 540 1 258 118 0 78 chr5 67731179 67731230 -135354302 + L2 LINE L2 3267 3313 0 245 284 98 19 chr5 67731218 67731368 -135354164 + MIR SINE MIR 7 166 -62 * 1173 221 66 21 chr5 67731839 67732447 -135353085 - L1ME1 LINE L1 -18 6408 5670 1574 184 18 104 chr5 67732452 67732941 -135352591 - L1ME1 LINE L1 -795 5611 5165 999 232 11 17 chr5 67732932 67733286 -135352246 - L1ME1 LINE L1 -1867 4539 4110 * 4915 96 0 2 chr5 67733301 67733936 -135351596 + L1PA14 LINE L1 5511 6144 -17 2452 247 112 32 chr5 67734000 67735009 -135350523 - L1ME1 LINE L1 -3083 3323 2397 2371 84 0 3 chr5 67735009 67735305 -135350227 - AluY SINE Alu -16 295 1 2452 247 112 32 chr5 67735305 67736648 -135348884 - L1ME1 LINE L1 -4009 2397 775 410 121 0 61 chr5 67737821 67737887 -135347645 - MLT1G LTR MaLR -305 285 224 463 264 163 41 chr5 67738562 67738808 -135346724 + MLT1K LTR MaLR 203 478 -110 383 392 102 24 chr5 67738984 67739407 -135346125 + L2 LINE L2 2813 3268 -4 1026 247 58 89 chr5 67739560 67739953 -135345579 + MLT1J1 LTR MaLR 66 446 0 474 339 6 18 chr5 67740944 67741115 -135344417 - MER5A DNA MER1_type -15 174 6 327 377 73 15 chr5 67741134 67741407 -135344125 + L2 LINE L2 2689 2977 -337 211 256 195 12 chr5 67742724 67742806 -135342726 - MIR3 SINE MIR -23 185 89 923 285 146 25 chr5 67743765 67744238 -135341294 - LTR67 LTR ERVL -2 555 26 2200 126 131 50 chr5 67744708 67745104 -135340428 + MSTA LTR MaLR 1 428 0 2069 118 46 82 chr5 67745109 67745498 -135340034 + THE1C LTR MaLR 1 375 0 1512 305 33 46 chr5 67745533 67746222 -135339310 - ERVL LTR ERVL -474 5290 4611 273 344 8 23 chr5 67746281 67746412 -135339120 - ERVL LTR ERVL -5140 624 496 712 365 68 22 chr5 67746753 67747252 -135338280 - LTR67 LTR ERVL 0 557 36 356 262 151 48 chr5 67747765 67747971 -135337561 + MLT1K LTR MaLR 17 243 -345 338 263 69 103 chr5 67748050 67748282 -135337250 + MLT1K LTR MaLR 364 587 -1 1002 112 0 25 chr5 67748817 67749246 -135336286 + (CATTC)n Satellite Satellite 1 418 0 803 150 0 22 chr5 67749262 67749537 -135335995 + (CATTC)n Satellite Satellite 1 268 0 742 153 0 12 chr5 67749555 67749725 -135335807 + (CATTC)n Satellite Satellite 2 169 0 687 141 12 6 chr5 67749737 67749900 -135335632 + (CATTC)n Satellite Satellite 2 165 0 200 139 14 83 chr5 67749906 67749978 -135335554 + (TTCA)n Simple_repeat Simple_repeat 2 68 0 893 85 0 38 chr5 67750108 67750345 -135335187 + (CATTC)n Satellite Satellite 1 227 0 690 160 0 0 chr5 67750357 67750507 -135335025 + (CATTC)n Satellite Satellite 2 151 0 1091 111 0 0 chr5 67750525 67750705 -135334827 + (CATTC)n Satellite Satellite 1 180 0 1218 78 0 0 chr5 67750720 67750900 -135334632 + (CATTC)n Satellite Satellite 1 180 0 1014 89 6 11 chr5 67750916 67751096 -135334436 + (CATTC)n Satellite Satellite 2 180 0 271 39 65 39 chr5 67751127 67751204 -135334328 + (CATTC)n Satellite Satellite 2 80 0 6963 62 46 0 chr5 67802491 67803795 -135281737 - L1PA8 LINE L1 -2 6170 4925 216 362 11 21 chr5 67804121 67804215 -135281317 - MIR SINE MIR -150 112 20 349 273 76 15 chr5 67804259 67804391 -135281141 + MER91C DNA MER1_type 1 140 0 225 329 0 0 chr5 67806303 67806388 -135279144 + L1M4 LINE L1 4177 4261 -1885 478 326 125 27 chr5 67806388 67806716 -135278816 - MLT1I LTR MaLR 0 409 50 297 297 20 14 chr5 67806750 67807064 -135278468 + L1M4 LINE L1 4279 4658 -1488 21 57 0 0 chr5 67809108 67809143 -135276389 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr5 67809312 67809348 -135276184 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 67809420 67809456 -135276076 + AT_rich Low_complexity Low_complexity 1 36 0 350 320 48 0 chr5 67809601 67809748 -135275784 + MARNA DNA Mariner 43 196 -390 231 284 0 30 chr5 67811029 67811096 -135274436 - L2 LINE L2 0 3313 3249 493 291 66 16 chr5 67811442 67811624 -135273908 + MIR SINE MIR 47 237 -25 329 318 47 47 chr5 67814268 67814416 -135271116 - MLT1H LTR MaLR -288 261 114 903 292 72 41 chr5 67815081 67815496 -135270036 + L2 LINE L2 2885 3312 -1 180 321 107 23 chr5 67816030 67816161 -135269371 + L2 LINE L2 2521 2662 -652 195 268 170 18 chr5 67816240 67816352 -135269180 + L2 LINE L2 2859 2987 -285 861 265 30 0 chr5 67816689 67816919 -135268613 - MIR SINE MIR -10 252 16 212 255 19 75 chr5 67819788 67819894 -135265638 - L2 LINE L2 -211 3061 2962 253 287 0 23 chr5 67820356 67820443 -135265089 + L1MC4 LINE L1 7806 7890 -152 423 213 25 8 chr5 67820501 67820623 -135264909 + L1MC4 LINE L1 7918 8041 -1 192 313 62 0 chr5 67821628 67821692 -135263840 - L2 LINE L2 -227 3045 2978 566 245 86 86 chr5 67822093 67822174 -135263358 - MIR SINE MIR -4 258 178 2798 183 6 15 chr5 67822174 67822654 -135262878 - MER66A LTR ERV1 -2 476 1 566 245 86 86 chr5 67822654 67822829 -135262703 - MIR SINE MIR -83 179 2 578 282 12 6 chr5 67822856 67823026 -135262506 - MIR SINE MIR -3 259 89 1986 129 0 0 chr5 67823101 67823405 -135262127 + AluSx SINE Alu 5 308 0 1471 116 42 0 chr5 67823408 67823623 -135261909 + AluSg/x SINE Alu 85 308 -2 248 172 17 0 chr5 67823639 67823697 -135261835 + GA-rich Low_complexity Low_complexity 2 60 0 209 273 15 15 chr5 67824172 67824238 -135261294 + GA-rich Low_complexity Low_complexity 3 68 0 506 242 91 48 chr5 67826002 67826188 -135259344 - MIR SINE MIR -2 260 67 417 176 25 59 chr5 67827933 67828052 -135257480 + L1MC4a LINE L1 5327 5441 -2367 * 5549 149 40 15 chr5 67828043 67829044 -135256488 + L1MC2 LINE L1 5193 6217 -127 21 0 0 0 chr5 67829189 67829210 -135256322 + AT_rich Low_complexity Low_complexity 1 21 0 1102 290 53 33 chr5 67829210 67829700 -135255832 + L1MC4a LINE L1 5420 5919 -1889 22 0 0 0 chr5 67829868 67829890 -135255642 + AT_rich Low_complexity Low_complexity 1 22 0 536 272 28 91 chr5 67830532 67830786 -135254746 + MER102a DNA MER1_type 92 329 -1 707 324 114 29 chr5 67831028 67831478 -135254054 - L2 LINE L2 -15 3298 2784 2261 113 0 28 chr5 67831478 67831798 -135253734 - AluSx SINE Alu -1 311 1 707 324 114 29 chr5 67831798 67831973 -135253559 - L2 LINE L2 -529 2784 2625 305 342 51 32 chr5 67832969 67833127 -135252405 + L2 LINE L2 3112 3272 0 587 226 63 13 chr5 67833660 67833819 -135251713 - MIR SINE MIR -4 258 92 382 338 50 7 chr5 67834299 67834438 -135251094 + MIR SINE MIR 22 166 -96 314 318 8 0 chr5 67834479 67834608 -135250924 + L1MEd LINE L1 2 131 -5988 2223 196 125 4 chr5 67834656 67835151 -135250381 - MLT1F1 LTR MaLR -12 555 1 24 0 0 0 chr5 67835435 67835459 -135250073 + AT_rich Low_complexity Low_complexity 1 24 0 368 264 0 11 chr5 67836107 67836198 -135249334 - MIR3 SINE MIR -30 178 89 499 206 11 0 chr5 67838067 67838159 -135247373 + MER81 DNA DNA 1 93 -21 389 290 134 63 chr5 67838681 67839047 -135246485 + L1ME4a LINE L1 5712 6103 -18 745 102 0 16 chr5 67842462 67842590 -135242942 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 270 287 20 20 chr5 67843162 67843263 -135242269 - MIR3 SINE MIR -15 193 93 373 244 113 48 chr5 67843334 67843502 -135242030 + MIR SINE MIR 7 185 -77 189 241 86 35 chr5 67844165 67844223 -135241309 + L3 LINE CR1 373 433 -1144 2609 83 3 25 chr5 67844856 67845219 -135240313 + THE1A LTR MaLR 1 355 0 281 330 61 0 chr5 67845604 67845719 -135239813 + MIR3 SINE MIR 37 158 -50 2534 108 11 6 chr5 67845892 67846254 -135239278 + THE1B LTR MaLR 1 364 0 1176 205 39 3 chr5 67846467 67846779 -135238753 - MER33 DNA MER1_type 0 324 2 1260 221 74 25 chr5 67846934 67847341 -135238191 - L1ME1 LINE L1 -18 6943 6517 * 2905 231 87 31 chr5 67847339 67848506 -135237026 - L1ME1 LINE L1 -992 5949 4717 2122 248 60 41 chr5 67848719 67850063 -135235469 - L1ME1 LINE L1 -4737 2204 816 283 274 77 113 chr5 67850120 67850456 -135235076 - L1ME1 LINE L1 -5836 587 264 183 42 0 0 chr5 67850611 67850635 -135234897 + (TTG)n Simple_repeat Simple_repeat 3 26 0 9756 190 67 30 chr5 67852917 67853792 -135231740 + L1MC1 LINE L1 95 936 -5490 1775 208 28 10 chr5 67853792 67854181 -135231351 + MSTD LTR MaLR 1 396 0 5805 228 45 83 chr5 67854183 67855981 -135229551 + MSTD-int LTR MaLR 2 1731 -4 1452 223 53 48 chr5 67855985 67856379 -135229153 + MSTD LTR MaLR 1 396 0 9756 190 67 30 chr5 67856379 67859597 -135225935 + L1MC1 LINE L1 938 4425 -2001 2622 137 16 14 chr5 67859597 67860028 -135225504 + MSTB1 LTR MaLR 1 432 0 9756 190 67 30 chr5 67860028 67860995 -135224537 + L1MC1 LINE L1 4425 5354 -1072 470 221 64 15 chr5 67861004 67861208 -135224324 - L1M4 LINE L1 -1683 4463 4250 5164 165 28 44 chr5 67861268 67862445 -135223087 + L1MC1 LINE L1 5456 6613 0 1281 177 25 8 chr5 67862541 67862784 -135222748 - MSTB LTR MaLR 0 426 180 206 290 0 16 chr5 67862852 67862914 -135222618 + GA-rich Low_complexity Low_complexity 2 62 0 1480 205 50 0 chr5 67863381 67863698 -135221834 - MER58B DNA MER1_type 0 341 9 552 206 144 6 chr5 67863709 67863869 -135221663 + MER3 DNA MER1_type 1 182 -27 1751 185 32 20 chr5 67863882 67864288 -135221244 + LTR52 LTR ERVL 11 421 0 370 268 65 24 chr5 67864681 67864849 -135220683 + MER104 DNA Tc2 2 176 -4 261 163 0 0 chr5 67864896 67864945 -135220587 + T-rich Low_complexity Low_complexity 1 49 0 312 304 67 8 chr5 67865873 67866113 -135219419 + L1M4 LINE L1 4672 4925 -1221 930 225 11 0 chr5 67866503 67866690 -135218842 + MER5A DNA MER1_type 1 189 0 617 195 30 85 chr5 67867300 67867464 -135218068 - MER58B DNA MER1_type -15 326 172 1641 203 0 0 chr5 67867557 67867917 -135217615 + L1P LINE L1 2762 3121 -3025 338 107 18 0 chr5 67867917 67867973 -135217559 + (TA)n Simple_repeat Simple_repeat 2 58 0 390 200 0 0 chr5 67868295 67868360 -135217172 - MER5A DNA MER1_type 0 189 125 514 167 44 6 chr5 67868360 67868539 -135216993 + L1MA9 LINE L1 6006 6288 -24 331 183 28 0 chr5 67868575 67868646 -135216886 + L1MA9 LINE L1 6008 6080 -232 290 223 85 0 chr5 67868649 67868743 -135216789 + L1MA9 LINE L1 6180 6281 -31 222 204 0 23 chr5 67868759 67868803 -135216729 - MER5A DNA MER1_type -45 144 102 1867 178 3 0 chr5 67868804 67869097 -135216435 - AluSx SINE Alu -14 298 5 740 119 0 9 chr5 67869110 67869219 -135216313 - MER5A DNA MER1_type -78 111 4 679 237 71 30 chr5 67869230 67869428 -135216104 - MER58A DNA MER1_type 0 224 19 727 238 50 20 chr5 67870570 67870772 -135214760 - MIR SINE MIR -21 241 34 356 299 175 0 chr5 67870782 67870919 -135214613 + MER5A DNA MER1_type 29 189 0 259 177 0 38 chr5 67870945 67871024 -135214508 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 16237 116 21 21 chr5 67871309 67873979 -135211553 - Tigger4(Zombi) DNA MER2_type -60 2671 1 1810 205 87 8 chr5 67873980 67874462 -135211070 + L1ME1 LINE L1 5642 6161 -5 950 235 50 98 chr5 67876038 67876540 -135208992 + MLT1H LTR MaLR 72 549 0 309 249 65 22 chr5 67876651 67876836 -135208696 - L1ME3A LINE L1 -203 5967 5775 407 163 0 12 chr5 67876843 67876929 -135208603 + CT-rich Low_complexity Low_complexity 4 88 0 1772 100 32 0 chr5 67877763 67878012 -135207520 - L1PA10 LINE L1 -2 6166 5910 1953 230 84 29 chr5 67878078 67879307 -135206225 - L1MC4 LINE L1 -140 7902 6461 214 327 179 34 chr5 67879886 67880265 -135205267 + L2 LINE L2 1839 2272 -1042 1992 127 13 26 chr5 67880595 67880903 -135204629 - THE1B LTR MaLR 0 364 61 10505 93 8 7 chr5 67880904 67882297 -135203235 - THE1B-int LTR MaLR -185 1395 1 2276 134 57 20 chr5 67882297 67882648 -135202884 - THE1B LTR MaLR 0 364 1 254 309 64 54 chr5 67882652 67882856 -135202676 + L2 LINE L2 2827 3032 -240 2028 240 21 6 chr5 67883048 67883515 -135202017 - MER119 DNA MER1_type -6 577 104 2206 114 10 0 chr5 67883796 67884086 -135201446 - AluSg SINE Alu -17 293 1 248 373 57 32 chr5 67885232 67885546 -135199986 + L2 LINE L2 2437 2758 -556 232 306 0 0 chr5 67886755 67886827 -135198705 + MIR SINE MIR 186 257 -5 370 294 84 18 chr5 67888237 67888456 -135197076 - MIR SINE MIR -11 251 18 5087 130 45 93 chr5 67888668 67888851 -135196681 - L1MC3 LINE L1 0 7785 7595 2045 117 7 3 chr5 67888851 67889133 -135196399 - AluSx SINE Alu -29 283 1 5087 130 45 93 chr5 67889133 67890045 -135195487 - L1MC3 LINE L1 -190 7595 6743 200 302 114 47 chr5 67890066 67890215 -135195317 - L2 LINE L2 -548 2766 2608 973 214 52 24 chr5 67890378 67890630 -135194902 - MIR SINE MIR -2 260 2 277 217 108 0 chr5 67890882 67890965 -135194567 - L2 LINE L2 -27 3245 3154 2497 55 0 3 chr5 67891714 67892007 -135193525 - AluY SINE Alu -19 292 1 352 250 34 0 chr5 67894518 67894606 -135190926 + MLT1F1 LTR MaLR 35 125 -442 2438 152 53 68 chr5 67894637 67894865 -135190667 + L1MD3 LINE L1 7469 7699 -296 369 0 0 0 chr5 67894865 67894906 -135190626 + (CA)n Simple_repeat Simple_repeat 1 41 0 2438 152 53 68 chr5 67894906 67895209 -135190323 + L1MD3 LINE L1 7699 7992 -3 871 293 88 34 chr5 67895939 67896328 -135189204 - LTR16A LTR ERVL -41 409 1 619 320 74 11 chr5 67896711 67896980 -135188552 - MERVL LTR ERVL -418 5067 4782 4398 154 25 15 chr5 67897189 67897908 -135187624 + L1MA4 LINE L1 10 735 -4593 * 6339 155 25 48 chr5 67897903 67899115 -135186417 + L1MA4 LINE L1 4325 5515 -967 16513 39 2 0 chr5 67899115 67901780 -135183752 - L1PA4 LINE L1 0 6155 3488 6339 155 25 48 chr5 67901780 67902715 -135182817 + L1MA4 LINE L1 5515 6469 -13 333 351 8 8 chr5 67902838 67902969 -135182563 - MERVL LTR ERVL -1265 4389 4259 2003 266 42 31 chr5 67902974 67903752 -135181780 - L1MEc LINE L1 -4341 2055 1269 480 176 104 16 chr5 67903762 67903887 -135181645 - L1MEc LINE L1 -5300 1096 961 517 260 62 0 chr5 67903888 67904034 -135181498 - L1MEc LINE L1 -6192 204 50 742 262 188 65 chr5 67904130 67904672 -135180860 + MLT1L LTR MaLR 3 611 -4 517 272 54 67 chr5 67905498 67905722 -135179810 - MIR SINE MIR -41 221 1 312 345 47 34 chr5 67905812 67905960 -135179572 - MIR SINE MIR -32 230 81 296 324 47 30 chr5 67906975 67907156 -135178376 - MIR SINE MIR -51 211 30 394 295 147 19 chr5 67907416 67907572 -135177960 + MER5B DNA MER1_type 3 178 0 495 310 92 14 chr5 67907604 67907746 -135177786 + MER91A DNA MER1_type 18 170 -26 280 353 71 74 chr5 67907817 67908265 -135177267 - L2 LINE L2 0 3272 2826 401 230 22 65 chr5 67908661 67908800 -135176732 + L1MC5 LINE L1 7781 7913 -48 206 31 0 31 chr5 67908901 67908933 -135176599 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 238 274 162 34 chr5 67909624 67909741 -135175791 + L2 LINE L2 3141 3272 0 184 135 135 0 chr5 67909740 67909777 -135175755 - L3b LINE CR1 -219 1364 1323 * 2657 140 43 10 chr5 67910194 67910608 -135174924 + MSTA LTR MaLR 1 428 0 224 111 28 0 chr5 67911196 67911232 -135174300 - MIR SINE MIR -120 142 106 1149 191 47 0 chr5 67913046 67913281 -135172251 - AluJb SINE Alu -1 311 66 1057 260 161 17 chr5 67913295 67913649 -135171883 - MLT1E LTR MaLR -186 407 3 427 195 35 11 chr5 67913650 67913737 -135171795 + MLT1J2 LTR MaLR 362 450 0 440 333 42 12 chr5 67913844 67914012 -135171520 - L2 LINE L2 -536 2778 2606 2029 189 28 21 chr5 67914041 67914503 -135171029 + MLT2D LTR ERVL 6 464 0 543 257 105 12 chr5 67914563 67914734 -135170798 - MIR SINE MIR -14 248 62 251 310 0 0 chr5 67915142 67915213 -135170319 - L2 LINE L2 0 3272 3202 254 258 0 0 chr5 67915355 67915417 -135170115 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 187 353 102 30 chr5 67916560 67916727 -135168805 - L2 LINE L2 -208 3064 2886 390 307 66 24 chr5 67916759 67916925 -135168607 - MIR SINE MIR -56 206 34 1390 135 0 0 chr5 67917006 67917213 -135168319 + L1P5 LINE L1 5585 5791 -365 297 0 0 0 chr5 67917213 67917246 -135168286 + (TA)n Simple_repeat Simple_repeat 2 34 0 302 179 0 0 chr5 67917246 67917302 -135168230 - L1MC4 LINE L1 -1339 6703 6648 309 88 246 0 chr5 67917310 67917367 -135168165 - MLT2A1 LTR ERVL 0 453 383 206 62 31 78 chr5 67917376 67917440 -135168092 + (TTAA)n Simple_repeat Simple_repeat 4 64 0 2592 99 35 8 chr5 67917440 67917813 -135167719 - MLT2A1 LTR ERVL -61 383 1 36089 68 5 3 chr5 67917813 67922287 -135163245 - HERVL-A1 LTR ERVL 0 5654 1171 20076 91 22 30 chr5 67922289 67925152 -135160380 + MER61A-int LTR ERV1 2376 5217 0 827 127 62 22 chr5 67925152 67925416 -135160116 + MER61A LTR ERV1 1 343 0 202 289 0 0 chr5 67925756 67925801 -135159731 + (CATG)n Simple_repeat Simple_repeat 2 46 0 227 246 101 0 chr5 67927031 67927100 -135158432 + MIR SINE MIR 106 181 -81 2288 97 3 0 chr5 67927444 67927732 -135157800 - AluSp SINE Alu -24 289 1 734 242 189 38 chr5 67929896 67930292 -135155240 - L1ME4a LINE L1 -65 6056 5601 233 125 0 21 chr5 67930419 67930467 -135155065 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 230 326 43 0 chr5 67930541 67930633 -135154899 - L1ME4a LINE L1 -501 5620 5525 331 276 104 18 chr5 67930771 67930934 -135154598 - L1ME4a LINE L1 -678 5443 5267 21 36 0 0 chr5 67931005 67931033 -135154499 + AT_rich Low_complexity Low_complexity 1 28 0 184 259 0 37 chr5 67931287 67931341 -135154191 + L2 LINE L2 3166 3217 -96 226 212 42 127 chr5 67933108 67933226 -135152306 - L3b LINE CR1 -187 1396 1289 197 0 0 67 chr5 67934536 67934566 -135150966 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 423 330 121 46 chr5 67934712 67935107 -135150425 + L2 LINE L2 1577 2043 -1271 2048 119 18 0 chr5 67935107 67935413 -135150119 - AluSx SINE Alu 0 311 1 423 330 121 46 chr5 67935413 67935668 -135149864 + L2 LINE L2 2043 2277 -1037 2244 152 126 87 chr5 67935705 67936197 -135149335 + MLT2B2 LTR ERVL 1 511 -4 1848 155 0 67 chr5 67937056 67937385 -135148147 - AluSx SINE Alu -5 307 1 2723 63 3 55 chr5 67939028 67939333 -135146199 - L1PB1 LINE L1 0 6151 5867 1962 128 22 0 chr5 67939333 67939643 -135145889 + AluSx SINE Alu 4 319 0 2723 63 3 55 chr5 67939643 67939717 -135145815 - L1PB1 LINE L1 -284 5867 5791 237 174 0 0 chr5 67939739 67939785 -135145747 + LTR66 LTR ERVL 394 439 -171 201 147 0 0 chr5 67939785 67939819 -135145713 + (TA)n Simple_repeat Simple_repeat 2 35 0 3979 110 21 2 chr5 67939819 67940419 -135145113 - L1P5 LINE L1 -359 5792 5177 180 0 0 0 chr5 67940419 67940439 -135145093 + (TTA)n Simple_repeat Simple_repeat 2 21 0 3979 110 21 2 chr5 67940439 67940535 -135144997 - L1P5 LINE L1 -974 5177 5084 370 279 63 93 chr5 67941124 67941393 -135144139 - MIR SINE MIR 0 262 2 228 233 156 44 chr5 67941399 67941489 -135144043 + MIR3 SINE MIR 94 193 -15 536 257 73 19 chr5 67941652 67941858 -135143674 + L2 LINE L2 1698 1914 -1400 306 345 60 0 chr5 67942235 67942351 -135143181 - MIR3 SINE MIR -42 166 44 25 0 0 0 chr5 67944662 67944687 -135140845 + AT_rich Low_complexity Low_complexity 1 25 0 256 280 13 40 chr5 67944702 67944777 -135140755 - MIR3 SINE MIR -21 187 115 2372 60 0 0 chr5 67945572 67945895 -135139637 + AluY SINE Alu 1 323 0 276 239 18 73 chr5 67947979 67948088 -135137444 - MIR SINE MIR -71 191 89 269 284 52 52 chr5 67948086 67948202 -135137330 - MIR3 SINE MIR -87 121 6 * 512 268 45 56 chr5 67948322 67948501 -135137031 - MLT1J LTR MaLR -334 177 1 29 104 0 0 chr5 67950668 67950774 -135134758 + AT_rich Low_complexity Low_complexity 1 106 0 492 329 0 7 chr5 67951195 67951347 -135134185 + MIR3 SINE MIR 49 199 -9 231 61 0 0 chr5 67951351 67951384 -135134148 + (CA)n Simple_repeat Simple_repeat 2 34 0 925 141 6 6 chr5 67951711 67951881 -135133651 + G-rich Low_complexity Low_complexity 4 173 0 201 228 139 40 chr5 67954797 67954898 -135130634 - MIR SINE MIR -86 176 66 261 0 0 0 chr5 67955441 67955470 -135130062 + (CCTG)n Simple_repeat Simple_repeat 3 31 0 1454 188 15 31 chr5 67956205 67956530 -135129002 + MER33 DNA MER1_type 1 320 -4 269 291 37 60 chr5 67957537 67957671 -135127861 - MIR3 SINE MIR -39 169 39 278 250 62 10 chr5 67957764 67957860 -135127672 - MER115 DNA AcHobo -119 574 474 195 162 0 0 chr5 67958238 67958275 -135127257 + (CA)n Simple_repeat Simple_repeat 1 37 0 216 0 0 0 chr5 67958340 67958364 -135127168 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1473 183 17 28 chr5 67959282 67959572 -135125960 + AluJb SINE Alu 1 287 -25 399 276 44 66 chr5 67959736 67959917 -135125615 + MIR SINE MIR 21 197 -65 2163 108 7 3 chr5 67960267 67960562 -135124970 - AluSx SINE Alu -12 300 5 226 288 116 30 chr5 67960658 67960891 -135124641 + L2 LINE L2 1877 2129 -1185 222 118 0 0 chr5 67960972 67961006 -135124526 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 1344 298 92 54 chr5 67961014 67962096 -135123436 + L2 LINE L2 2140 3264 -49 366 234 37 75 chr5 67962411 67962518 -135123014 + MER94 DNA DNA 19 121 -13 21 82 0 0 chr5 67962836 67962885 -135122647 + AT_rich Low_complexity Low_complexity 1 49 0 455 332 53 20 chr5 67962981 67963225 -135122307 - MIR SINE MIR 0 262 11 647 251 48 6 chr5 67963433 67963600 -135121932 - MIR3 SINE MIR -8 200 27 2268 132 0 0 chr5 67964215 67964542 -135120990 - L1MA2 LINE L1 0 7723 7397 2794 164 12 14 chr5 67964542 67965060 -135120472 - L1MA2 LINE L1 -1054 6511 5995 932 129 7 0 chr5 67965058 67965197 -135120335 + L1 LINE L1 3995 4134 -2012 * 12439 168 26 20 chr5 67965211 67965948 -135119584 - L1MA2 LINE L1 -5351 2214 1483 7723 41 6 1 chr5 67965948 67966991 -135118541 + L1PA7 LINE L1 5104 6150 -4 12439 168 26 20 chr5 67966991 67968442 -135117090 - L1MA2 LINE L1 -6082 1483 13 24 32 0 0 chr5 67969194 67969225 -135116307 + AT_rich Low_complexity Low_complexity 1 31 0 536 310 106 25 chr5 67969476 67969897 -135115635 + MLT1J2 LTR MaLR 1 441 -5 248 321 96 31 chr5 67969962 67970191 -135115341 + MIR SINE MIR 5 249 -13 1448 254 35 123 chr5 67971197 67972043 -135113489 + LTR41 LTR ERVL 1 772 -1 3835 314 59 27 chr5 67972464 67974343 -135111189 + ERVL LTR ERVL 435 2503 -3261 27 29 0 0 chr5 67974354 67974388 -135111144 + AT_rich Low_complexity Low_complexity 1 34 0 250 303 0 0 chr5 67974390 67974456 -135111076 + ERVL LTR ERVL 2507 2572 -3192 478 284 92 26 chr5 67974480 67974709 -135110823 + MLT1J LTR MaLR 268 511 0 219 69 0 0 chr5 67977205 67977234 -135108298 + (CA)n Simple_repeat Simple_repeat 1 29 0 2372 90 0 0 chr5 67977255 67977556 -135107976 - AluY SINE Alu -10 301 1 207 216 118 0 chr5 67978354 67978405 -135107127 + L2 LINE L2 3148 3204 -68 700 309 36 40 chr5 67978916 67979168 -135106364 - MIR SINE MIR 0 262 12 1414 219 3 10 chr5 67979659 67979951 -135105581 - MER58B DNA MER1_type 0 341 52 828 275 70 46 chr5 67980671 67980955 -135104577 + LTR16C LTR ERVL 69 359 -132 1011 291 15 12 chr5 67981128 67981465 -135104067 + L2 LINE L2 2806 3143 -170 639 229 104 56 chr5 67981662 67981893 -135103639 + MIR SINE MIR 21 262 0 3848 84 14 30 chr5 67982050 67982618 -135102914 + L1MA5A LINE L1 5735 6293 -4 513 273 110 0 chr5 67983326 67983480 -135102052 - LTR16C LTR ERVL -196 295 125 481 236 34 88 chr5 67984919 67985067 -135100465 + MIR SINE MIR 6 145 -63 316 257 10 20 chr5 67985393 67985494 -135100038 + L1MC4 LINE L1 6614 6713 -1329 272 301 14 14 chr5 67986198 67986271 -135099261 - MIR SINE MIR -156 106 34 2180 99 0 20 chr5 67987288 67987580 -135097952 - AluSx SINE Alu -26 286 1 1549 102 13 206 chr5 67989252 67989636 -135095896 + AluJb SINE Alu 1 310 -2 2185 168 13 18 chr5 67991214 67991601 -135093931 + MLT1B LTR MaLR 2 386 -4 260 318 85 23 chr5 67991688 67991817 -135093715 - MIR3 SINE MIR -61 147 11 183 200 0 0 chr5 67992451 67992486 -135093046 + L2 LINE L2 3278 3312 -1 501 231 0 54 chr5 67992865 67992995 -135092537 - MIR SINE MIR -139 123 1 423 221 228 7 chr5 67993951 67994100 -135091432 - MIR3 SINE MIR -18 190 9 1785 173 7 7 chr5 67994173 67994480 -135091052 - AluJb SINE Alu 0 307 1 294 262 136 0 chr5 67994576 67994679 -135090853 - MIR SINE MIR -6 256 140 2049 178 13 37 chr5 67996080 67996457 -135089075 + MLT1A2 LTR MaLR 4 371 -3 342 268 73 24 chr5 67996891 67997014 -135088518 - L1MD3 LINE L1 -57 7938 7810 1196 289 62 29 chr5 67997589 67998167 -135087365 + HAL1 LINE L1 630 1226 -1281 748 241 121 17 chr5 67998169 67998401 -135087131 + L2 LINE L2 2718 2973 -341 369 339 48 13 chr5 67999383 67999613 -135085919 + MER102a DNA MER1_type 93 330 0 449 228 264 0 chr5 68000810 68000977 -135084555 + MIR SINE MIR 4 214 -48 180 0 0 0 chr5 68001078 68001098 -135084434 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 693 198 0 9 chr5 68001690 68001842 -135083690 + FLAM_A SINE Alu 2 152 0 473 292 120 36 chr5 68002600 68002901 -135082631 + LTR16A LTR ERVL 19 344 -106 21 57 0 0 chr5 68003482 68003517 -135082015 + AT_rich Low_complexity Low_complexity 1 35 0 260 269 128 0 chr5 68005218 68005296 -135080236 + MIR SINE MIR 45 132 -130 * 345 244 213 30 chr5 68005287 68005451 -135080081 + L2 LINE L2 3119 3312 -1 * 372 273 23 8 chr5 68005449 68005577 -135079955 + MIR SINE MIR 97 226 -36 326 344 0 0 chr5 68005992 68006088 -135079444 - MIR3 SINE MIR -3 205 110 287 139 0 0 chr5 68006646 68006689 -135078843 + MER5B DNA MER1_type 1 43 -135 359 254 76 8 chr5 68006766 68006884 -135078648 - MIR SINE MIR -97 165 40 21 0 0 0 chr5 68006988 68007009 -135078523 + AT_rich Low_complexity Low_complexity 1 21 0 2923 13 0 0 chr5 68007060 68007378 -135078154 + AluYb8 SINE Alu 1 318 0 559 172 26 17 chr5 68007462 68007578 -135077954 - L1MB8 LINE L1 -3 6175 6059 3635 263 90 36 chr5 68011358 68012983 -135072549 - HAL1 LINE L1 -147 2360 649 2417 96 0 6 chr5 68013636 68013948 -135071584 + AluSg SINE Alu 1 310 0 428 228 27 74 chr5 68014421 68014570 -135070962 - L2 LINE L2 -3 3310 3169 478 329 58 67 chr5 68014767 68015183 -135070349 - L2 LINE L2 -387 2927 2516 222 348 68 0 chr5 68015235 68015353 -135070179 - L2 LINE L2 -962 2352 2227 306 300 12 44 chr5 68015414 68015574 -135069958 + MER5A DNA MER1_type 35 189 0 22 0 0 0 chr5 68016216 68016238 -135069294 + AT_rich Low_complexity Low_complexity 1 22 0 481 289 60 109 chr5 68016527 68016781 -135068751 - L2 LINE L2 -1 3271 3047 1079 200 0 48 chr5 68016781 68017011 -135068521 - MER20 DNA MER1_type 0 219 1 481 289 60 109 chr5 68017011 68017206 -135068326 - L2 LINE L2 -225 3047 2844 1751 106 4 16 chr5 68017551 68017796 -135067736 + AluSq SINE Alu 5 246 -67 25 0 0 0 chr5 68019024 68019049 -135066483 + AT_rich Low_complexity Low_complexity 1 25 0 1204 207 89 64 chr5 68019551 68019792 -135065740 - Charlie4a DNA MER1_type -1463 498 264 2260 109 3 3 chr5 68019792 68020105 -135065427 + AluSq SINE Alu 1 313 0 1204 207 89 64 chr5 68020105 68020346 -135065186 - Charlie4a DNA MER1_type -1697 264 4 2094 113 18 0 chr5 68021104 68021388 -135064144 - AluSx SINE Alu -23 289 1 599 277 91 76 chr5 68021390 68021719 -135063813 + MLT1K LTR MaLR 253 586 -2 495 273 6 44 chr5 68022192 68022375 -135063157 + CT-rich Low_complexity Low_complexity 4 179 0 415 302 39 90 chr5 68023775 68024162 -135061370 + L1M4 LINE L1 4123 4489 -1657 318 26 0 0 chr5 68024250 68024289 -135061243 + (TG)n Simple_repeat Simple_repeat 1 39 0 487 118 82 0 chr5 68025331 68025416 -135060116 - AluJ/FLAM SINE Alu -219 93 2 731 133 0 8 chr5 68025416 68025536 -135059996 - MER4A LTR ERV1 -545 119 1 217 222 296 0 chr5 68025667 68025748 -135059784 - L2 LINE L2 0 3272 3168 826 152 16 0 chr5 68025748 68025873 -135059659 + AluJb SINE Alu 1 127 -185 2160 117 7 0 chr5 68025874 68026164 -135059368 - AluSx SINE Alu -20 292 1 2132 120 17 0 chr5 68027178 68027479 -135058053 + AluSx SINE Alu 1 306 -6 1159 210 28 136 chr5 68028019 68028472 -135057060 - MER39 LTR ERV1 -235 472 82 1545 173 48 7 chr5 68028472 68028744 -135056788 - AluJb SINE Alu -29 283 1 1159 210 28 136 chr5 68028744 68028818 -135056714 - MER39 LTR ERV1 -625 82 2 2252 100 3 16 chr5 68030580 68030891 -135054641 - AluSx SINE Alu -5 307 1 236 307 11 23 chr5 68030907 68030995 -135054537 + MLT1I LTR MaLR 281 367 -42 917 232 76 33 chr5 68031047 68031323 -135054209 - MLT1E2 LTR MaLR 0 626 339 1899 138 10 3 chr5 68031630 68031920 -135053612 + AluSx SINE Alu 6 297 -15 2815 119 24 5 chr5 68031952 68032373 -135053159 - Tigger4(Zombi) DNA MER2_type -246 2485 2057 1898 91 35 7 chr5 68032373 68032658 -135052874 + AluSx SINE Alu 1 293 -19 511 274 53 31 chr5 68033150 68033376 -135052156 - L2 LINE L2 -2 3311 3081 222 171 0 45 chr5 68036053 68036141 -135049391 + A-rich Low_complexity Low_complexity 2 85 0 235 209 18 45 chr5 68036291 68036401 -135049131 + (CAAA)n Simple_repeat Simple_repeat 4 110 0 633 108 45 27 chr5 68036931 68037042 -135048490 - MER81 DNA DNA 0 114 2 2322 78 0 0 chr5 68039064 68039345 -135046187 + AluY SINE Alu 21 301 -10 738 180 22 105 chr5 68040111 68040248 -135045284 + MLT1F LTR MaLR 334 446 -96 1795 184 0 3 chr5 68040248 68040557 -135044975 + AluJo SINE Alu 3 310 -2 738 180 22 105 chr5 68040557 68040647 -135044885 + MLT1F LTR MaLR 446 542 0 219 374 10 0 chr5 68040691 68040790 -135044742 - L2 LINE L2 -565 2749 2650 333 243 103 28 chr5 68040985 68041092 -135044440 + MLT1I LTR MaLR 19 133 -276 948 175 9 90 chr5 68041301 68041524 -135044008 - MLT1C LTR MaLR -210 257 53 2411 136 34 3 chr5 68041527 68041909 -135043623 + MER57A LTR ERV1 1 394 -9 281 218 216 66 chr5 68042021 68042331 -135043201 + L1MC4a LINE L1 5578 5883 -238 1984 117 7 3 chr5 68042447 68042738 -135042794 + AluSp SINE Alu 20 311 -2 349 262 47 9 chr5 68042828 68042935 -135042597 - MIR SINE MIR -56 206 96 2056 146 0 3 chr5 68043125 68043426 -135042106 + AluSx SINE Alu 1 300 -12 1341 88 39 0 chr5 68043673 68043855 -135041677 - AluSg SINE Alu -121 189 1 1700 141 11 8 chr5 68043855 68044117 -135041415 + MER4B LTR ERV1 348 610 0 2007 101 20 7 chr5 68044271 68044569 -135040963 + AluSx SINE Alu 1 302 -10 922 145 0 81 chr5 68044581 68044816 -135040716 + AluSq SINE Alu 1 216 -97 606 259 17 42 chr5 68044967 68045203 -135040329 + L1ME LINE L1 5523 5752 -418 948 277 100 39 chr5 68045203 68045694 -135039838 - LTR33 LTR ERVL 0 521 1 1242 90 60 0 chr5 68045812 68046012 -135039520 + AluSp SINE Alu 1 212 -101 267 31 0 0 chr5 68046282 68046314 -135039218 + (CA)n Simple_repeat Simple_repeat 1 32 0 205 301 0 14 chr5 68046865 68046938 -135038594 + L2 LINE L2 3242 3313 0 23 0 0 0 chr5 68046944 68046967 -135038565 + AT_rich Low_complexity Low_complexity 1 23 0 1692 107 0 69 chr5 68048226 68048336 -135037196 + AluSx SINE Alu 41 157 -155 426 39 0 0 chr5 68048336 68048388 -135037144 + (GA)n Simple_repeat Simple_repeat 2 53 0 1700 128 167 7 chr5 68048396 68048702 -135036830 - THE1A LTR MaLR 0 355 1 1692 107 0 69 chr5 68048702 68048872 -135036660 + AluSx SINE Alu 164 310 -2 335 157 14 0 chr5 68049500 68049570 -135035962 + CT-rich Low_complexity Low_complexity 4 74 0 328 311 19 0 chr5 68050036 68050142 -135035390 - MIR SINE MIR -50 212 105 1449 122 19 5 chr5 68050183 68050364 -135035168 - AluSq SINE Alu -5 308 122 360 0 0 0 chr5 68050364 68050404 -135035128 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1449 122 19 5 chr5 68050404 68050435 -135035097 - AluSq SINE Alu -191 122 93 1029 81 0 0 chr5 68050911 68051034 -135034498 - AluSq/x SINE Alu -188 125 3 955 129 0 0 chr5 68051702 68051834 -135033698 - AluSq/x SINE Alu -180 132 1 1187 125 0 0 chr5 68051839 68051999 -135033533 - FRAM SINE Alu -21 155 1 6511 150 5 30 chr5 68052000 68053149 -135032383 - L1P LINE L1 -4743 1403 284 221 167 0 21 chr5 68053515 68053563 -135031969 + (CGGGG)n Simple_repeat Simple_repeat 4 50 0 590 193 50 72 chr5 68053697 68053878 -135031654 + MER53 DNA DNA 1 177 -12 802 138 0 0 chr5 68053969 68054099 -135031433 + FLAM_C SINE Alu 11 140 -3 577 262 30 15 chr5 68054179 68054381 -135031151 - MIR SINE MIR -24 238 34 2480 94 9 0 chr5 68054571 68054902 -135030630 + MER41B LTR ERV1 302 635 0 1489 156 19 80 chr5 68054903 68054973 -135030559 + LTR8 LTR ERV1 397 470 -221 2373 100 0 0 chr5 68054973 68055283 -135030249 - AluY SINE Alu -1 310 1 1489 156 19 80 chr5 68055283 68055526 -135030006 + LTR8 LTR ERV1 470 691 0 801 268 42 48 chr5 68056254 68056609 -135028923 - L2 LINE L2 -10 3303 2951 196 299 30 30 chr5 68058624 68058691 -135026841 - MIR SINE MIR -79 129 63 368 301 20 0 chr5 68059131 68059284 -135026248 - L1ME LINE L1 -338 5783 5628 1050 245 36 4 chr5 68059433 68059682 -135025850 + MIR SINE MIR 2 258 -4 192 342 114 0 chr5 68060250 68060364 -135025168 - L2 LINE L2 -38 3275 3149 232 340 27 7 chr5 68060399 68060546 -135024986 + MIR SINE MIR 12 161 -101 219 274 0 0 chr5 68060583 68060634 -135024898 - L2 LINE L2 -9 3263 3213 21 36 0 0 chr5 68062612 68062640 -135022892 + AT_rich Low_complexity Low_complexity 1 28 0 4494 33 0 7 chr5 68063222 68063764 -135021768 + L1P2 LINE L1 5254 5791 -364 346 227 0 52 chr5 68064004 68064101 -135021431 - LTR67 LTR ERVL -7 550 459 259 275 66 96 chr5 68064254 68064421 -135021111 - MLT1K LTR MaLR -411 177 16 1844 153 0 19 chr5 68064750 68065064 -135020468 + AluJb SINE Alu 1 308 -4 1039 218 61 4 chr5 68065347 68065576 -135019956 - MLT1A1 LTR MaLR -123 242 1 662 321 68 58 chr5 68065884 68066414 -135019118 + L2 LINE L2 2434 2968 -346 953 85 0 0 chr5 68066631 68066749 -135018783 - AluSq/x SINE Alu -195 118 1 988 174 6 12 chr5 68067388 68067555 -135017977 - AluJo/FRAM SINE Alu 0 302 137 1444 115 5 14 chr5 68067558 68067767 -135017765 - AluSg/x SINE Alu -10 302 96 2429 79 0 16 chr5 68068347 68068663 -135016869 + AluY SINE Alu 1 311 0 865 109 0 115 chr5 68068667 68068841 -135016691 + MER4B LTR ERV1 206 359 -251 2153 118 6 13 chr5 68068869 68069184 -135016348 - AluSq SINE Alu 0 313 1 767 181 0 8 chr5 68069188 68069321 -135016211 - FLAM_C SINE Alu -10 133 2 337 325 0 18 chr5 68069533 68069647 -135015885 - L2 LINE L2 -2 3311 3200 1120 209 15 73 chr5 68069647 68069890 -135015642 + MER33 DNA MER1_type 1 207 -2378 2023 123 0 20 chr5 68069890 68070190 -135015342 + AluSc SINE Alu 1 294 -15 1120 209 15 73 chr5 68070190 68070302 -135015230 + MER33 DNA MER1_type 207 324 0 1076 114 25 0 chr5 68070612 68070770 -135014762 - AluSq SINE Alu -151 162 1 901 191 12 0 chr5 68071433 68071595 -135013937 - AluJb SINE Alu -1 311 148 191 244 67 33 chr5 68071696 68071786 -135013746 - MER5A DNA MER1_type -34 155 63 * 312 322 34 8 chr5 68071713 68071831 -135013701 + MER5A DNA MER1_type 64 184 -5 379 285 36 78 chr5 68071875 68072068 -135013464 + MIR SINE MIR 72 256 -6 277 146 0 0 chr5 68072086 68072134 -135013398 + MER5B DNA MER1_type 16 63 -115 2098 116 3 17 chr5 68072137 68072431 -135013101 + AluSq SINE Alu 4 293 -20 674 248 23 24 chr5 68073205 68073393 -135012139 - MLT2D LTR ERVL -141 273 88 1995 132 26 0 chr5 68073396 68073700 -135011832 + AluSx SINE Alu 1 312 0 311 290 102 32 chr5 68074474 68074660 -135010872 - LTR33 LTR ERVL 0 521 323 284 256 26 13 chr5 68074673 68074751 -135010781 - LTR33 LTR ERVL -378 143 65 2277 97 6 13 chr5 68075454 68075765 -135009767 - AluSx SINE Alu -3 309 1 1230 80 12 6 chr5 68077120 68077282 -135008250 + THE1B LTR MaLR 202 364 0 2206 101 3 13 chr5 68077395 68077693 -135007839 - AluSx SINE Alu -17 295 1 807 106 0 18 chr5 68077696 68077809 -135007723 - AluSq/x SINE Alu -179 133 23 1013 280 84 80 chr5 68077964 68078514 -135007018 + MLT1K LTR MaLR 37 588 0 2018 124 0 20 chr5 68078597 68078896 -135006636 + AluSx SINE Alu 5 297 -15 438 256 155 8 chr5 68078912 68079041 -135006491 - MER5A DNA MER1_type -39 150 3 258 234 78 0 chr5 68079303 68079380 -135006152 + Charlie8 DNA MER1_type 1346 1428 -989 2133 154 128 13 chr5 68079523 68079907 -135005625 - MSTA LTR MaLR 0 428 1 342 300 214 18 chr5 68079978 68080258 -135005274 + LTR67 LTR ERVL 116 450 -107 180 77 0 0 chr5 68080258 68080284 -135005248 + (T)n Simple_repeat Simple_repeat 1 26 0 326 344 0 0 chr5 68080605 68080701 -135004831 - MIR3 SINE MIR -3 205 110 277 122 0 0 chr5 68081258 68081299 -135004233 + MER5B DNA MER1_type 1 41 -137 2443 80 0 6 chr5 68081750 68082061 -135003471 + AluY SINE Alu 1 309 -2 25 0 0 0 chr5 68083352 68083377 -135002155 + AT_rich Low_complexity Low_complexity 1 25 0 249 151 0 0 chr5 68084017 68084070 -135001462 + (CA)n Simple_repeat Simple_repeat 1 53 0 35 54 0 0 chr5 68085035 68085091 -135000441 + GC_rich Low_complexity Low_complexity 1 56 0 26 30 0 0 chr5 68085621 68085654 -134999878 + AT_rich Low_complexity Low_complexity 1 33 0 239 278 14 0 chr5 68085899 68085971 -134999561 - MIR SINE MIR -176 86 14 248 296 45 0 chr5 68086553 68086641 -134998891 + MIR SINE MIR 90 181 -81 213 268 49 37 chr5 68087296 68087378 -134998154 - MIR SINE MIR -101 107 25 322 309 67 7 chr5 68088076 68088225 -134997307 - HAL1 LINE L1 -19 2488 2331 454 300 58 12 chr5 68088251 68088508 -134997024 - HAL1 LINE L1 -214 2293 2025 602 225 17 52 chr5 68088601 68088774 -134996758 + MER3 DNA MER1_type 3 122 -87 773 273 17 10 chr5 68088774 68089063 -134996469 - L1MEc LINE L1 -4138 2258 1968 529 315 0 0 chr5 68089411 68089554 -134995978 - MER63A DNA MER1_type -3 207 65 639 88 0 0 chr5 68089563 68089654 -134995878 + (TTCC)n Simple_repeat Simple_repeat 4 94 0 2171 119 0 7 chr5 68089682 68089975 -134995557 + AluSx SINE Alu 1 291 -21 361 315 0 31 chr5 68090514 68090644 -134994888 - L2 LINE L2 -5 3267 3142 886 276 98 49 chr5 68090823 68091333 -134994199 - LTR67 LTR ERVL -18 539 5 299 275 61 26 chr5 68091484 68091638 -134993894 - MIR SINE MIR -88 174 18 512 300 125 57 chr5 68091662 68092238 -134993294 - L2 LINE L2 -657 2657 2043 279 332 44 11 chr5 68092715 68092840 -134992692 + MIR SINE MIR 38 167 -41 1934 155 33 41 chr5 68094566 68094701 -134990831 + MLT1A1 LTR MaLR 1 136 -229 2334 160 36 64 chr5 68094701 68095139 -134990393 + MSTB LTR MaLR 1 426 0 1934 155 33 41 chr5 68095139 68095371 -134990161 + MLT1A1 LTR MaLR 136 365 0 869 252 41 58 chr5 68095471 68095765 -134989767 + MLT1H LTR MaLR 83 371 -178 322 143 18 0 chr5 68096071 68096127 -134989405 + MLT1H LTR MaLR 534 590 0 674 278 73 57 chr5 68096328 68096573 -134988959 - MIR SINE MIR 0 262 14 1133 218 152 57 chr5 68096749 68097328 -134988204 - MLT1D LTR MaLR 0 505 1 490 323 85 50 chr5 68097340 68097823 -134987709 + L1MC/D LINE L1 3847 4346 -1800 350 309 14 24 chr5 68097929 68098139 -134987393 + L1MC/D LINE L1 4487 4694 -1452 1448 108 15 5 chr5 68098186 68098389 -134987143 + MSTA LTR MaLR 1 205 -223 24767 112 11 19 chr5 68098522 68102341 -134983191 - L1P3 LINE L1 -1755 4706 921 4828 37 4 0 chr5 68102349 68102892 -134982640 - L1PA4 LINE L1 -3 6152 5608 2968 20 12 2 chr5 68102892 68103377 -134982155 + L1PA4 LINE L1 5121 5608 -547 499 88 44 0 chr5 68103369 68103437 -134982095 - L1P3 LINE L1 -5547 914 844 * 759 343 46 3 chr5 68103441 68103765 -134981767 + L1MC/D LINE L1 5441 5778 -2030 4404 139 27 14 chr5 68104789 68105485 -134980047 + MER44D DNA MER2_type 1 705 0 966 281 95 25 chr5 68105759 68106259 -134979273 - MLT1E LTR MaLR -2 591 1 33072 107 10 54 chr5 68107178 68113614 -134971918 - L1PA7 LINE L1 0 6154 12 206 282 137 24 chr5 68113645 68113769 -134971763 - MIR SINE MIR -97 165 28 590 266 53 57 chr5 68115188 68115489 -134970043 + L2 LINE L2 3014 3313 0 27 0 0 0 chr5 68115859 68115886 -134969646 + AT_rich Low_complexity Low_complexity 1 27 0 1888 160 3 3 chr5 68116113 68116419 -134969113 + AluJb SINE Alu 1 306 -6 2313 112 0 0 chr5 68119999 68120304 -134965228 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr5 68120376 68120399 -134965133 + AT_rich Low_complexity Low_complexity 1 23 0 281 254 58 29 chr5 68120399 68120537 -134964995 - HAL1b LINE L1 -26 1322 1181 2757 195 32 82 chr5 68120729 68121456 -134964076 - LTR8 LTR ERV1 -1 690 1 5521 146 29 4 chr5 68121641 68122635 -134962897 - L1PA15 LINE L1 -7 6158 5140 8097 183 13 3 chr5 68122839 68124346 -134961186 - L1P LINE L1 -925 5221 3700 2406 71 0 0 chr5 68176068 68176350 -134909182 - AluY SINE Alu -29 282 1 698 246 40 15 chr5 68176362 68176561 -134908971 - MLT1K LTR MaLR -63 525 322 927 274 225 7 chr5 68176596 68177019 -134908513 - LTR33A LTR ERVL -8 515 1 5252 213 64 31 chr5 68177602 68177758 -134907774 + L1MC4 LINE L1 6442 6591 -1451 342 0 0 0 chr5 68177758 68177796 -134907736 + (TG)n Simple_repeat Simple_repeat 1 38 0 5252 213 64 31 chr5 68177796 68179084 -134906448 + L1MC4 LINE L1 6591 8012 -30 419 266 14 70 chr5 68179271 68179414 -134906118 - MER69A DNA AcHobo -42 135 1 390 345 108 26 chr5 68180561 68180868 -134904664 + L2 LINE L2 2919 3250 -22 4088 109 28 35 chr5 68181368 68182019 -134903513 - LTR34 LTR ERV1 0 699 54 5481 144 18 30 chr5 68182733 68183647 -134901885 - MER4D LTR ERV1 0 903 1 312 27 0 0 chr5 68183800 68183837 -134901695 + (TG)n Simple_repeat Simple_repeat 1 37 0 4861 114 7 48 chr5 68184606 68185327 -134900205 + LTR8 LTR ERV1 1 691 0 252 200 0 0 chr5 68185759 68185814 -134899718 + (TTA)n Simple_repeat Simple_repeat 2 56 0 485 241 97 14 chr5 68186110 68186255 -134899277 + MER103 DNA DNA 8 164 -2 29 28 0 0 chr5 68186623 68186659 -134898873 + AT_rich Low_complexity Low_complexity 1 36 0 2519 219 76 12 chr5 68187003 68187607 -134897925 + LTR48B LTR ERV1 2 644 0 498 283 137 27 chr5 68188185 68188417 -134897115 + MIR SINE MIR 2 255 -7 2157 124 0 3 chr5 68188660 68188959 -134896573 - AluSx SINE Alu -14 298 1 580 271 33 11 chr5 68191382 68191718 -134893814 + MLT1I LTR MaLR 1 403 -6 1658 203 72 14 chr5 68193227 68193572 -134891960 + MLT1A1 LTR MaLR 1 365 0 401 306 60 66 chr5 68194909 68195226 -134890306 + MLT1J LTR MaLR 1 315 -196 2110 125 3 0 chr5 68195663 68195951 -134889581 + AluSx SINE Alu 1 289 -23 1661 181 7 30 chr5 68196300 68196604 -134888928 + AluJo SINE Alu 1 297 -15 2430 63 0 3 chr5 68196687 68196988 -134888544 - AluY SINE Alu -11 300 1 189 0 0 0 chr5 68196989 68197010 -134888522 + (T)n Simple_repeat Simple_repeat 1 21 0 3784 253 50 46 chr5 68197299 68198964 -134886568 - L1ME LINE L1 -490 5680 3995 623 259 46 23 chr5 68198974 68199190 -134886342 + L1ME3A LINE L1 5664 5884 -286 1374 239 129 18 chr5 68199198 68199641 -134885891 - HAL1 LINE L1 -627 1880 1389 296 261 78 123 chr5 68199993 68200261 -134885271 - MLT1K LTR MaLR -3 585 330 2119 123 7 0 chr5 68202633 68202933 -134882599 + AluSx SINE Alu 1 302 -10 579 229 0 0 chr5 68203008 68203152 -134882380 + GA-rich Low_complexity Low_complexity 1 144 0 1237 219 25 84 chr5 68203425 68203781 -134881751 - MLT1C LTR MaLR 0 467 133 7730 38 3 1 chr5 68203781 68204656 -134880876 + L1PA5 LINE L1 5267 6143 -11 23 0 0 0 chr5 68204656 68204679 -134880853 + AT_rich Low_complexity Low_complexity 1 23 0 750 181 22 0 chr5 68204686 68204824 -134880708 - MLT1C LTR MaLR -326 141 1 258 160 0 0 chr5 68205010 68205060 -134880472 + (ATG)n Simple_repeat Simple_repeat 2 51 0 781 210 6 6 chr5 68205069 68205226 -134880306 - MIR SINE MIR -6 256 100 2172 123 67 17 chr5 68205309 68205666 -134879866 + THE1C LTR MaLR 1 375 0 306 50 0 0 chr5 68206620 68206660 -134878872 + (TC)n Simple_repeat Simple_repeat 1 40 0 1000 174 0 12 chr5 68206994 68207161 -134878371 - AluJb SINE Alu -14 298 134 284 109 55 18 chr5 68207617 68207672 -134877860 - MLT1L LTR MaLR -28 587 531 823 184 60 30 chr5 68207675 68207843 -134877689 - FRAM SINE Alu -5 171 1 536 183 38 23 chr5 68208277 68208408 -134877124 + LTR16C LTR ERVL 346 478 -13 490 309 114 47 chr5 68208418 68208995 -134876537 + HERV16 LTR ERVL 2 617 -4379 319 348 18 18 chr5 68209002 68209166 -134876366 + HERV16 LTR ERVL 763 926 -4838 1778 161 10 3 chr5 68209386 68209677 -134875855 - AluJb SINE Alu -19 293 1 319 53 0 0 chr5 68209785 68209823 -134875709 + MLT2A2 LTR ERVL 416 453 0 40254 71 10 4 chr5 68209823 68209950 -134875582 + HERVL-A2-A1 LTR ERVL 1 126 -5528 2143 127 0 10 chr5 68209950 68210257 -134875275 - AluSg SINE Alu -6 304 1 40254 71 10 4 chr5 68210257 68215192 -134870340 + HERVL-A2-A1 LTR ERVL 126 5091 -563 2994 66 13 0 chr5 68215292 68215673 -134869859 + HERVL-A2-A1 LTR ERVL 5269 5654 0 3090 81 67 7 chr5 68215673 68216092 -134869440 + MLT2A1 LTR ERVL 1 444 0 1062 289 19 3 chr5 68216188 68216499 -134869033 + HERV16 LTR ERVL 2054 2369 -3395 303 314 52 23 chr5 68216498 68216762 -134868770 + HERVL LTR ERVL 4321 4609 -876 * 2301 152 41 16 chr5 68216879 68217382 -134868150 + MLT2A2 LTR ERVL 1 413 -40 490 161 18 0 chr5 68217382 68217494 -134868038 + (TA)n Simple_repeat Simple_repeat 2 115 0 1257 334 37 26 chr5 68217542 68218189 -134867343 + HERVL LTR ERVL 4773 5426 -338 182 394 0 0 chr5 68219586 68219652 -134865880 - MIR SINE MIR -1 261 196 * 448 304 34 82 chr5 68219648 68219770 -134865762 + L2 LINE L2 2533 2659 -655 2119 140 0 9 chr5 68219770 68220085 -134865447 - AluJb SINE Alu 0 312 1 448 304 34 82 chr5 68220085 68220255 -134865277 + L2 LINE L2 2659 2811 -503 547 303 120 19 chr5 68220344 68220611 -134864921 + L2 LINE L2 3020 3313 0 478 351 48 6 chr5 68221405 68221570 -134863962 - L2 LINE L2 0 3272 3101 253 236 19 123 chr5 68222046 68222152 -134863380 - L2 LINE L2 -260 3012 2918 621 236 85 6 chr5 68222677 68222842 -134862690 - MIR SINE MIR -19 243 66 1537 166 122 20 chr5 68222997 68223341 -134862191 + L1MA8 LINE L1 5913 6291 0 24 0 0 0 chr5 68223341 68223365 -134862167 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 68224126 68224148 -134861384 + AT_rich Low_complexity Low_complexity 1 22 0 181 325 49 73 chr5 68224209 68224332 -134861200 + L2 LINE L2 3142 3261 -11 413 235 29 59 chr5 68224570 68224740 -134860792 + L1ME4a LINE L1 5955 6119 -2 261 206 0 48 chr5 68226311 68226374 -134859158 + MLT1J2 LTR MaLR 38 97 -353 241 263 30 61 chr5 68226591 68226690 -134858842 - L2 LINE L2 -12 3260 3165 1658 193 52 60 chr5 68226798 68227140 -134858392 - MLT2B1 LTR ERVL -139 381 41 4408 58 319 0 chr5 68227140 68227766 -134857766 + LTR12 LTR ERV1 1 826 0 1658 193 52 60 chr5 68227766 68227807 -134857725 - MLT2B1 LTR ERVL -479 41 1 439 303 160 20 chr5 68229829 68230179 -134855353 + LTR16C LTR ERVL 93 491 0 268 303 8 42 chr5 68230577 68230696 -134854836 + GA-rich Low_complexity Low_complexity 5 119 0 230 325 13 26 chr5 68231807 68231884 -134853648 - MER91A DNA MER1_type 0 196 121 471 304 93 12 chr5 68231894 68232055 -134853477 - MER91A DNA MER1_type -22 174 1 22 56 0 0 chr5 68232588 68232624 -134852908 + AT_rich Low_complexity Low_complexity 1 36 0 34 24 0 0 chr5 68233180 68233221 -134852311 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr5 68233569 68233590 -134851942 + AT_rich Low_complexity Low_complexity 1 21 0 1277 249 59 86 chr5 68233639 68233742 -134851790 - MLT1L LTR MaLR 0 615 511 1647 174 33 10 chr5 68233742 68234047 -134851485 + AluJo SINE Alu 1 312 0 1277 249 59 86 chr5 68234047 68234126 -134851406 - MLT1L LTR MaLR -104 511 431 2555 73 0 0 chr5 68234126 68234426 -134851106 + AluSc SINE Alu 1 300 -9 1277 249 59 86 chr5 68234426 68234752 -134850780 - MLT1L LTR MaLR -184 431 120 206 273 0 0 chr5 68234793 68234837 -134850695 + polypurine Low_complexity Low_complexity 1 44 0 270 0 0 0 chr5 68235940 68235970 -134849562 + (CA)n Simple_repeat Simple_repeat 2 31 0 262 283 151 40 chr5 68236750 68236902 -134848630 + MIR SINE MIR 21 189 -73 904 227 11 90 chr5 68237230 68237507 -134848025 + MIR SINE MIR 2 256 -6 217 214 0 0 chr5 68237957 68237999 -134847533 + GA-rich Low_complexity Low_complexity 4 45 0 285 302 215 6 chr5 68239059 68239231 -134846301 + L2 LINE L2 2128 2335 -979 273 287 68 87 chr5 68239234 68239769 -134845763 + L2 LINE L2 2511 3061 -211 21 36 0 0 chr5 68240301 68240329 -134845203 + AT_rich Low_complexity Low_complexity 1 28 0 253 211 275 28 chr5 68240545 68240654 -134844878 + L2 LINE L2 3132 3267 -5 391 270 27 27 chr5 68240674 68240785 -134844747 + MIR3 SINE MIR 89 199 -9 770 262 107 79 chr5 68240860 68241330 -134844202 + MLT1G1 LTR MaLR 40 595 0 2061 144 99 9 chr5 68241854 68242188 -134843344 - MLT1A1 LTR MaLR -1 364 1 645 252 110 8 chr5 68243045 68243263 -134842269 - MIR SINE MIR -11 251 15 2403 119 12 6 chr5 68243307 68243642 -134841890 - MER1B DNA MER1_type 0 337 1 23 0 0 0 chr5 68245306 68245329 -134840203 + AT_rich Low_complexity Low_complexity 1 23 0 1059 221 69 0 chr5 68245334 68245565 -134839967 - MIR SINE MIR -14 248 2 860 258 35 1 chr5 68245887 68246096 -134839436 + MIR SINE MIR 35 248 -14 345 47 0 0 chr5 68246841 68246884 -134838648 + (CA)n Simple_repeat Simple_repeat 2 44 0 305 247 81 86 chr5 68246916 68247264 -134838268 - L1ME4a LINE L1 -203 5918 5573 279 277 50 10 chr5 68247626 68247727 -134837805 + MER5B DNA MER1_type 72 176 -2 1765 139 26 40 chr5 68248998 68249300 -134836232 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr5 68249543 68249568 -134835964 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr5 68251188 68251214 -134834318 + (T)n Simple_repeat Simple_repeat 1 26 0 238 239 43 54 chr5 68252635 68252727 -134832805 - LTR67 LTR ERVL -10 547 457 2845 92 14 0 chr5 68253066 68253425 -134832107 + THE1B LTR MaLR 1 364 0 322 319 72 42 chr5 68253707 68253873 -134831659 + MIR SINE MIR 9 179 -83 241 194 65 0 chr5 68254992 68255054 -134830478 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 225 277 85 21 chr5 68255882 68255976 -134829556 + MIR3 SINE MIR 5 104 -104 1749 206 31 17 chr5 68256200 68256560 -134828972 - MLT1A1 LTR MaLR 0 365 1 275 167 0 19 chr5 68256754 68256808 -134828724 - MIR3 SINE MIR -48 160 108 1478 153 8 16 chr5 68257202 68257450 -134828082 + AluJb SINE Alu 1 246 -66 1064 181 10 19 chr5 68257556 68257761 -134827771 + AluJb SINE Alu 105 307 -5 1786 196 30 38 chr5 68257825 68258218 -134827314 - MLT1B LTR MaLR 0 390 1 489 249 58 46 chr5 68258321 68258494 -134827038 + L1ME4a LINE L1 5485 5659 -462 1886 137 31 3 chr5 68258559 68258851 -134826681 + AluJb SINE Alu 3 302 -10 316 189 144 0 chr5 68259062 68259152 -134826380 + L1ME4a LINE L1 6007 6109 -12 300 200 0 0 chr5 68259155 68259225 -134826307 + (TG)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr5 68260119 68260140 -134825392 + AT_rich Low_complexity Low_complexity 1 21 0 213 288 41 14 chr5 68261093 68261166 -134824366 - MIR SINE MIR -114 148 74 192 40 0 0 chr5 68261481 68261506 -134824026 + (CA)n Simple_repeat Simple_repeat 1 25 0 6115 102 12 12 chr5 68261690 68262080 -134823452 - L1PA13 LINE L1 0 6163 5774 2557 102 25 22 chr5 68262080 68262443 -134823089 - THE1B LTR MaLR 0 364 1 6115 102 12 12 chr5 68262443 68262937 -134822595 - L1PA13 LINE L1 -388 5775 5279 726 245 131 63 chr5 68263204 68263723 -134821809 + LTR33A LTR ERVL 4 523 0 341 248 20 30 chr5 68264321 68264422 -134821110 - MIR SINE MIR -134 128 29 740 239 68 56 chr5 68264574 68264825 -134820707 + MIR SINE MIR 9 262 0 2414 146 34 14 chr5 68265459 68265816 -134819716 + THE1B LTR MaLR 1 364 0 13027 82 1 1 chr5 68265816 68267396 -134818136 + THE1B-int LTR MaLR 1 1580 0 2515 121 39 14 chr5 68267396 68267751 -134817781 + THE1B LTR MaLR 1 364 0 2665 35 0 7 chr5 68267819 68268129 -134817403 - AluY SINE Alu -3 308 1 978 191 47 57 chr5 68268134 68268432 -134817100 + MER96B DNA MER1_type? 123 417 0 272 279 196 13 chr5 68268580 68268738 -134816794 + MIR SINE MIR 22 208 -54 199 344 107 8 chr5 68268770 68268901 -134816631 - MIR SINE MIR -116 146 3 258 267 0 0 chr5 68269158 68269218 -134816314 - FLAM_A SINE Alu -7 126 67 1930 115 7 7 chr5 68269219 68269498 -134816034 - MER50 LTR ERV1 -23 711 433 830 180 111 11 chr5 68269481 68269670 -134815862 - MER50 LTR ERV1 -494 240 33 * 243 231 0 0 chr5 68269673 68269725 -134815807 + C-rich Low_complexity Low_complexity 1 52 0 356 203 0 0 chr5 68269754 68269823 -134815709 - AluJ/FLAM SINE Alu -233 69 1 302 215 153 62 chr5 68270027 68270227 -134815305 + L1ME4a LINE L1 5652 5832 -289 1740 154 27 13 chr5 68270227 68270525 -134815007 + AluJb SINE Alu 1 302 -10 302 215 153 62 chr5 68270525 68270718 -134814814 + L1ME4a LINE L1 5832 6117 -4 1802 162 40 7 chr5 68270837 68271139 -134814393 - AluJo SINE Alu 0 312 1 962 177 29 29 chr5 68271205 68271380 -134814152 - FAM SINE Alu 0 175 1 2085 168 40 59 chr5 68272043 68272518 -134813014 + MLT1C LTR MaLR 1 466 -1 424 303 50 0 chr5 68273135 68273254 -134812278 - L2 LINE L2 -23 3249 3125 885 206 55 0 chr5 68273257 68273422 -134812110 + FAM SINE Alu 2 175 0 338 294 196 32 chr5 68273488 68274121 -134811411 - L2 LINE L2 -460 2854 2118 422 321 37 82 chr5 68276609 68276684 -134808848 - MIR SINE MIR -1 261 184 1555 167 36 4 chr5 68276684 68276836 -134808696 - AluJb SINE Alu -27 285 119 342 0 0 0 chr5 68276836 68276874 -134808658 + (TG)n Simple_repeat Simple_repeat 2 39 0 1555 167 36 4 chr5 68276874 68276997 -134808535 - AluJb SINE Alu -193 119 1 422 321 37 82 chr5 68276997 68277189 -134808343 - MIR SINE MIR -78 184 6 373 23 0 0 chr5 68277285 68277329 -134808203 - MADE1 DNA Mariner 0 80 37 386 0 0 0 chr5 68278132 68278176 -134807356 + MADE1 DNA Mariner 37 80 0 28 0 0 0 chr5 68278454 68278482 -134807050 + AT_rich Low_complexity Low_complexity 1 28 0 2224 127 3 0 chr5 68278608 68278916 -134806616 - AluSx SINE Alu -3 309 1 509 281 20 7 chr5 68279000 68279153 -134806379 + MER103 DNA DNA 12 166 0 34 42 0 0 chr5 68280108 68280156 -134805376 + AT_rich Low_complexity Low_complexity 1 48 0 2047 172 76 5 chr5 68280178 68280573 -134804959 - L1MC2 LINE L1 -5 6339 5917 254 306 121 8 chr5 68280583 68280707 -134804825 - MIR SINE MIR -74 188 51 2233 117 0 0 chr5 68281453 68281751 -134803781 + AluSg SINE Alu 1 298 -12 1603 247 92 27 chr5 68281757 68282238 -134803294 - LTR33 LTR ERVL -6 515 4 25 0 0 0 chr5 68282336 68282361 -134803171 + AT_rich Low_complexity Low_complexity 1 25 0 195 191 0 0 chr5 68282631 68282673 -134802859 - L2 LINE L2 0 3272 3231 728 281 127 24 chr5 68282776 68283198 -134802334 - L2 LINE L2 -261 3052 2521 32418 90 19 10 chr5 68283767 68289249 -134796283 + L1PA7 LINE L1 625 6150 -4 205 325 52 0 chr5 68290225 68290302 -134795230 - MIR3 SINE MIR -43 165 85 405 0 0 0 chr5 68290499 68290544 -134794988 + (CA)n Simple_repeat Simple_repeat 1 45 0 252 0 0 0 chr5 68290543 68290571 -134794961 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 276 143 0 0 chr5 68291538 68291594 -134793938 + (TA)n Simple_repeat Simple_repeat 2 57 0 219 69 0 0 chr5 68291594 68291623 -134793909 + (CA)n Simple_repeat Simple_repeat 2 30 0 319 346 0 0 chr5 68291676 68291783 -134793749 - MIR SINE MIR -122 140 34 357 303 110 0 chr5 68291800 68291909 -134793623 - L2 LINE L2 -9 3263 3143 2110 136 3 35 chr5 68293321 68293478 -134792054 - L1M3 LINE L1 -395 5776 5616 2541 106 93 18 chr5 68293478 68293876 -134791656 - MSTA LTR MaLR 0 428 1 2110 136 3 35 chr5 68293876 68294064 -134791468 - L1M3 LINE L1 -555 5616 5442 263 305 191 0 chr5 68295061 68295192 -134790340 + MIR3 SINE MIR 33 188 -20 406 265 15 15 chr5 68295751 68295883 -134789649 - LTR33 LTR ERVL -8 513 382 699 284 5 18 chr5 68295979 68296197 -134789335 - LTR33 LTR ERVL -306 215 1 180 216 0 0 chr5 68298296 68298333 -134787199 - L2 LINE L2 -16 3297 3261 5133 145 20 11 chr5 68298412 68299280 -134786252 + L1MB2 LINE L1 5288 6162 -9 814 228 39 11 chr5 68299280 68299460 -134786072 + MLT1F LTR MaLR 11 195 -372 243 0 0 0 chr5 68299464 68299491 -134786041 + (T)n Simple_repeat Simple_repeat 1 27 0 1074 162 91 5 chr5 68299503 68299700 -134785832 + MLT1F LTR MaLR 329 542 0 686 125 0 0 chr5 68300636 68300732 -134784800 - AluSx SINE Alu -11 299 204 906 103 0 0 chr5 68300732 68300848 -134784684 - AluSx SINE Alu -196 116 1 259 304 130 17 chr5 68300883 68300998 -134784534 - MIR SINE MIR -60 148 21 2060 128 0 0 chr5 68301163 68301480 -134784052 - AluSx SINE Alu 0 317 1 439 275 133 24 chr5 68302064 68302736 -134782796 + L1MC5 LINE L1 7098 7671 -290 699 212 84 11 chr5 68302736 68302915 -134782617 + LTR41 LTR ERVL 1 192 -581 2183 92 0 42 chr5 68303375 68303681 -134781851 - AluSg SINE Alu -17 293 1 296 24 0 24 chr5 68303713 68303755 -134781777 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 619 206 122 23 chr5 68303763 68303894 -134781638 - FRAM SINE Alu -32 144 1 1678 149 41 30 chr5 68303904 68304199 -134781333 - AluJb SINE Alu -14 298 1 396 153 14 0 chr5 68304199 68304271 -134781261 + LTR41 LTR ERVL 700 772 -1 493 223 69 8 chr5 68304276 68304406 -134781126 + L1MC4 LINE L1 7781 7918 -124 228 280 17 59 chr5 68304437 68304555 -134780977 + L1MC4 LINE L1 7904 8016 -26 1731 157 7 27 chr5 68304572 68304865 -134780667 + AluJb SINE Alu 1 287 -25 215 159 23 0 chr5 68305661 68305705 -134779827 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 264 269 184 18 chr5 68305729 68306038 -134779494 + LTR16A1 LTR ERVL 55 457 0 899 256 96 42 chr5 68306048 68306380 -134779152 - L2 LINE L2 -1 3312 2963 574 258 211 19 chr5 68306408 68306726 -134778806 - L2 LINE L2 -570 2744 2366 228 219 171 8 chr5 68306856 68306979 -134778553 + L1ME4a LINE L1 5160 5302 -844 1643 168 68 0 chr5 68306990 68307270 -134778262 - AluJo SINE Alu -13 299 1 269 230 115 30 chr5 68307661 68307826 -134777706 + L1ME4a LINE L1 5939 6117 -4 993 233 15 130 chr5 68308058 68308581 -134776951 + LTR67 LTR ERVL 95 557 0 329 279 37 37 chr5 68309570 68309706 -134775826 + LTR67 LTR ERVL 156 291 -266 1905 123 28 14 chr5 68310082 68310367 -134775165 - AluSx SINE Alu -23 289 1 699 257 55 105 chr5 68310396 68310674 -134774858 - L1MC4a LINE L1 -237 5884 5635 1692 159 37 0 chr5 68310674 68310945 -134774587 + AluJo SINE Alu 23 303 -9 699 257 55 105 chr5 68310945 68311056 -134774476 - L1MC4a LINE L1 -486 5635 5520 747 267 117 67 chr5 68311232 68311651 -134773881 - MLT1L LTR MaLR -173 442 3 319 233 39 78 chr5 68312433 68312562 -134772970 - L1ME3 LINE L1 0 6162 6039 247 303 11 34 chr5 68312657 68312746 -134772786 - MER102a DNA MER1_type -1 329 243 502 259 43 11 chr5 68312749 68312883 -134772649 - L1ME3 LINE L1 -372 5749 5606 2420 69 0 16 chr5 68312883 68313188 -134772344 + AluY SINE Alu 1 300 -11 502 259 43 11 chr5 68313188 68313238 -134772294 - L1ME3 LINE L1 -515 5606 5559 788 270 84 25 chr5 68313308 68313630 -134771902 + LTR16B LTR ERVL 104 444 -20 259 299 130 16 chr5 68313666 68313850 -134771682 - L1ME3 LINE L1 -575 5546 5342 230 167 24 0 chr5 68314128 68314170 -134771362 - MIR SINE MIR -7 255 213 2173 127 0 3 chr5 68316912 68317211 -134768321 - AluSx SINE Alu -14 298 1 1641 157 94 92 chr5 68317319 68317350 -134768182 - MLT2D LTR ERVL 0 414 385 459 0 0 0 chr5 68317350 68317401 -134768131 + (CA)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr5 68317400 68317423 -134768109 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 1641 157 94 92 chr5 68317401 68317649 -134767883 - MLT2D LTR ERVL -29 385 139 3002 99 129 99 chr5 68317649 68318232 -134767300 + MER4A LTR ERV1 1 600 0 1641 157 94 92 chr5 68318232 68318279 -134767253 - MLT2D LTR ERVL -275 139 94 2271 119 0 3 chr5 68318279 68318590 -134766942 + AluJb SINE Alu 1 310 -2 1641 157 94 92 chr5 68318590 68318696 -134766836 - MLT2D LTR ERVL -320 94 1 344 70 0 18 chr5 68319307 68319364 -134766168 + (TC)n Simple_repeat Simple_repeat 1 56 0 1925 157 59 57 chr5 68319550 68319939 -134765593 + MLT1B LTR MaLR 1 390 0 392 157 48 24 chr5 68320045 68320128 -134765404 + L1M4 LINE L1 4830 4914 -1232 2788 138 23 28 chr5 68320150 68320578 -134764954 - MSTB LTR MaLR 0 426 1 8758 161 58 13 chr5 68320578 68322158 -134763374 - MSTB-int LTR MaLR 0 1651 1 2546 158 26 28 chr5 68322158 68322582 -134762950 - MSTB LTR MaLR 0 426 4 5996 147 18 31 chr5 68322584 68322921 -134762611 + L1MA9 LINE L1 4907 5247 -1065 3231 150 17 93 chr5 68322921 68323521 -134762011 - MLT2B3 LTR ERVL 0 554 1 5996 147 18 31 chr5 68323521 68324022 -134761510 + L1MA9 LINE L1 5247 5753 -559 2122 147 123 23 chr5 68324022 68324411 -134761121 - MSTA LTR MaLR 0 428 1 5996 147 18 31 chr5 68324411 68325000 -134760532 + L1MA9 LINE L1 5753 6312 0 1775 158 6 45 chr5 68325054 68325365 -134760167 + AluJb SINE Alu 1 299 -13 463 193 102 40 chr5 68326220 68326396 -134759136 + LTR33A LTR ERVL 2 188 -335 2311 102 0 0 chr5 68326668 68327105 -134758427 - AluSx SINE Alu 0 312 1 1824 99 26 7 chr5 68327470 68327743 -134757789 - L1MA5A LINE L1 -1 6296 6019 1855 172 0 40 chr5 68327909 68328234 -134757298 - AluJo SINE Alu 0 312 1 468 215 0 9 chr5 68329611 68329718 -134755814 - AluSp/q SINE Alu 0 313 208 190 315 27 0 chr5 68330438 68330511 -134755021 + L2 LINE L2 3192 3266 -47 226 226 81 0 chr5 68331180 68331242 -134754290 + MER91C DNA MER1_type 22 88 -52 386 283 124 64 chr5 68331767 68332113 -134753419 - MLT1J2 LTR MaLR -6 422 37 24 77 0 0 chr5 68332344 68332396 -134753136 + AT_rich Low_complexity Low_complexity 1 52 0 396 0 0 0 chr5 68332936 68332980 -134752552 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2140 150 0 3 chr5 68333548 68333861 -134751671 + AluSx SINE Alu 1 312 0 1669 161 21 3 chr5 68334227 68334512 -134751020 - L1PB4 LINE L1 0 6156 5867 21 0 0 0 chr5 68334694 68334715 -134750817 + AT_rich Low_complexity Low_complexity 1 21 0 1726 151 10 33 chr5 68335862 68336166 -134749366 - AluJb SINE Alu -15 297 1 321 313 61 71 chr5 68337855 68338053 -134747479 - MER91A DNA MER1_type 0 196 1 180 370 65 65 chr5 68338481 68338789 -134746743 + L2 LINE L2 2945 3252 -20 1564 220 99 63 chr5 68339390 68339895 -134745637 - MLT1F LTR MaLR -19 523 1 2304 100 3 0 chr5 68340216 68340517 -134745015 + AluSx SINE Alu 1 302 -10 387 287 17 9 chr5 68340647 68340762 -134744770 - L2 LINE L2 -5 3308 3193 309 118 0 0 chr5 68340939 68340990 -134744542 + (TG)n Simple_repeat Simple_repeat 1 51 0 284 230 185 44 chr5 68341355 68341490 -134744042 + MLT1I LTR MaLR 18 171 -238 431 164 135 84 chr5 68341625 68341782 -134743750 + MLT1F1 LTR MaLR 431 567 0 1621 195 237 5 chr5 68341811 68342221 -134743311 + MLT1D LTR MaLR 1 505 0 26 0 0 0 chr5 68342524 68342550 -134742982 + AT_rich Low_complexity Low_complexity 1 26 0 6211 56 20 8 chr5 68342743 68343498 -134742034 + L1PA8 LINE L1 5409 6172 0 593 264 64 33 chr5 68343627 68343957 -134741575 - L1MC5 LINE L1 -36 7925 7586 4296 87 5 31 chr5 68344321 68344908 -134740624 - L1PA10 LINE L1 -11 6157 5586 597 238 100 38 chr5 68348257 68348569 -134736963 - HAL1b LINE L1 -2 2505 785 312 227 10 21 chr5 68348656 68348753 -134736779 - HAL1b LINE L1 -507 841 746 363 264 0 0 chr5 68348782 68348869 -134736663 - HAL1 LINE L1 -343 2164 2078 1768 182 16 65 chr5 68349653 68350037 -134735495 + MLT1A1 LTR MaLR 1 365 0 1903 173 134 41 chr5 68350173 68350635 -134734897 - MLT1D LTR MaLR 0 505 1 361 310 31 23 chr5 68350707 68350836 -134734696 + MER5B DNA MER1_type 1 130 -48 893 195 130 18 chr5 68350836 68351110 -134734422 - L1MD3 LINE L1 0 8042 7752 234 281 0 12 chr5 68351140 68351222 -134734310 - L1 LINE L1 -3800 2346 2266 7970 181 111 19 chr5 68351388 68352995 -134732537 + MER52A LTR ERV1 1 1755 0 2634 154 90 0 chr5 68353150 68353467 -134732065 + L1MB2 LINE L1 5450 5826 -345 180 0 0 0 chr5 68353467 68353487 -134732045 + (TA)n Simple_repeat Simple_repeat 1 20 0 2634 154 90 0 chr5 68353487 68353648 -134731884 + L1MB2 LINE L1 5826 5971 -200 1647 209 3 3 chr5 68353648 68353940 -134731592 + AluJo SINE Alu 1 292 -20 322 65 0 0 chr5 68353956 68354002 -134731530 - L1PA7 LINE L1 -4 6150 6105 293 286 0 14 chr5 68354104 68354174 -134731358 - MER5B DNA MER1_type -109 69 1 2043 113 3 7 chr5 68354377 68354684 -134730848 + AluSx SINE Alu 2 307 0 2515 121 39 14 chr5 68354754 68355109 -134730423 - THE1B LTR MaLR 0 364 1 13032 81 2 1 chr5 68355109 68356688 -134728844 - THE1B-int LTR MaLR 0 1580 1 2414 146 34 14 chr5 68356688 68357045 -134728487 - THE1B LTR MaLR 0 364 1 740 239 68 56 chr5 68357679 68357930 -134727602 - MIR SINE MIR 0 262 9 341 248 20 30 chr5 68358082 68358183 -134727349 + MIR SINE MIR 29 128 -134 696 244 131 65 chr5 68358781 68359301 -134726231 - LTR33A LTR ERVL 0 523 4 6152 102 11 12 chr5 68359568 68360062 -134725470 + L1PA13 LINE L1 5279 5773 -390 2557 102 25 22 chr5 68360062 68360425 -134725107 + THE1B LTR MaLR 1 364 0 6152 102 11 12 chr5 68360425 68360816 -134724716 + L1PA13 LINE L1 5773 6163 0 25 0 0 0 chr5 68361190 68361215 -134724317 + AT_rich Low_complexity Low_complexity 1 25 0 1603 247 92 27 chr5 68361313 68361794 -134723738 + LTR33 LTR ERVL 4 515 -6 2233 117 0 0 chr5 68361800 68362098 -134723434 - AluSg SINE Alu -12 298 1 254 306 121 8 chr5 68362844 68362968 -134722564 + MIR SINE MIR 51 188 -74 2047 172 76 5 chr5 68362978 68363373 -134722159 + L1MC2 LINE L1 5917 6339 -5 34 42 0 0 chr5 68363395 68363443 -134722089 + AT_rich Low_complexity Low_complexity 1 48 0 509 281 20 7 chr5 68364397 68364550 -134720982 - MER103 DNA DNA 0 166 12 2224 127 3 0 chr5 68364634 68364942 -134720590 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 68365068 68365096 -134720436 + AT_rich Low_complexity Low_complexity 1 28 0 386 0 0 0 chr5 68365374 68365418 -134720114 - MADE1 DNA Mariner 0 80 37 373 23 0 0 chr5 68366221 68366265 -134719267 + MADE1 DNA Mariner 37 80 0 422 321 37 82 chr5 68366361 68366553 -134718979 + MIR SINE MIR 6 184 -78 1555 167 36 4 chr5 68366553 68366676 -134718856 + AluJb SINE Alu 1 119 -193 342 0 0 0 chr5 68366676 68366714 -134718818 + (CA)n Simple_repeat Simple_repeat 2 39 0 1555 167 36 4 chr5 68366714 68366866 -134718666 + AluJb SINE Alu 119 285 -27 422 321 37 82 chr5 68366866 68366941 -134718591 + MIR SINE MIR 184 261 -1 338 294 196 32 chr5 68369430 68370063 -134715469 + L2 LINE L2 2118 2854 -460 885 206 55 0 chr5 68370129 68370294 -134715238 - FAM SINE Alu 0 175 2 424 303 50 0 chr5 68370297 68370416 -134715116 + L2 LINE L2 3125 3249 -23 225 0 0 0 chr5 68370948 68370973 -134714559 + (A)n Simple_repeat Simple_repeat 1 25 0 2110 170 38 59 chr5 68371033 68371509 -134714023 - MLT1C LTR MaLR -1 466 1 962 177 29 29 chr5 68372171 68372346 -134713186 + FAM SINE Alu 1 175 0 1802 162 40 7 chr5 68372412 68372714 -134712818 + AluJo SINE Alu 1 312 0 302 215 153 62 chr5 68372833 68373026 -134712506 - L1ME4a LINE L1 -4 6117 5943 1740 154 27 13 chr5 68373026 68373324 -134712208 - AluJb SINE Alu -10 302 1 302 215 153 62 chr5 68373324 68373524 -134712008 - L1ME4a LINE L1 -178 5943 5652 356 203 0 0 chr5 68373728 68373797 -134711735 + AluJ/FLAM SINE Alu 1 69 -233 243 231 0 0 chr5 68373826 68373878 -134711654 + G-rich Low_complexity Low_complexity 1 52 0 830 180 111 11 chr5 68373881 68374070 -134711462 + MER50 LTR ERV1 33 240 -494 * 1930 115 7 7 chr5 68374053 68374332 -134711200 + MER50 LTR ERV1 433 711 -23 258 267 0 0 chr5 68374333 68374393 -134711139 + FLAM_A SINE Alu 67 126 -7 193 300 138 31 chr5 68374650 68374780 -134710752 + MIR SINE MIR 3 146 -116 272 279 196 13 chr5 68374812 68374970 -134710562 - MIR SINE MIR -54 208 22 978 191 47 57 chr5 68375118 68375416 -134710116 - MER96B DNA MER1_type? 0 417 123 2663 30 0 7 chr5 68375421 68375726 -134709806 + AluY SINE Alu 1 303 -8 28 0 0 0 chr5 68375737 68375765 -134709767 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 68375875 68375896 -134709636 + AT_rich Low_complexity Low_complexity 1 21 0 2224 101 0 7 chr5 68375951 68376247 -134709285 - AluSq SINE Alu -19 294 1 2301 104 3 0 chr5 68377452 68377759 -134707773 + AluSg SINE Alu 1 308 -2 2196 122 0 0 chr5 68377817 68378120 -134707412 + AluSc SINE Alu 1 303 -6 714 143 23 8 chr5 68378169 68378302 -134707230 + L1MB3 LINE L1 6041 6175 -8 2222 112 10 0 chr5 68378532 68378827 -134706705 - AluSx SINE Alu -14 298 1 914 239 66 8 chr5 68378867 68379110 -134706422 + MER20B DNA MER1_type 110 366 -417 1019 241 25 4 chr5 68379113 68379349 -134706183 + MER20B DNA MER1_type 311 551 -232 21 0 0 0 chr5 68379349 68379370 -134706162 + AT_rich Low_complexity Low_complexity 1 21 0 2334 101 0 0 chr5 68380215 68380513 -134705019 + AluSg1 SINE Alu 2 299 -10 461 227 92 47 chr5 68380627 68380791 -134704741 + L1ME4a LINE L1 5696 5892 -229 1876 155 13 7 chr5 68380791 68381100 -134704432 + AluJb SINE Alu 2 312 0 461 227 92 47 chr5 68381100 68381214 -134704318 + L1ME4a LINE L1 5892 5999 -122 345 327 107 24 chr5 68381624 68382006 -134703526 + L2 LINE L2 2562 2975 -339 3023 58 13 19 chr5 68382016 68382393 -134703139 + THE1C LTR MaLR 1 375 0 394 326 62 17 chr5 68382543 68382721 -134702811 + MIR SINE MIR 25 210 -52 254 272 19 87 chr5 68382851 68382954 -134702578 + L2 LINE L2 2992 3087 -185 310 318 47 19 chr5 68383182 68383289 -134702243 + L2 LINE L2 3163 3272 0 512 290 86 35 chr5 68383905 68384344 -134701188 + LTR33 LTR ERVL 23 521 0 648 195 32 0 chr5 68384379 68384502 -134701030 + MER94 DNA DNA 8 134 0 208 200 31 54 chr5 68386368 68386498 -134699034 + (TTATA)n Simple_repeat Simple_repeat 4 130 0 336 24 0 0 chr5 68386560 68386601 -134698931 + (TG)n Simple_repeat Simple_repeat 2 42 0 1866 162 7 19 chr5 68386629 68386937 -134698595 - AluJo SINE Alu -8 304 1 194 183 11 151 chr5 68387267 68387360 -134698172 - L2 LINE L2 -251 3021 2942 214 316 158 0 chr5 68387446 68387541 -134697991 - L2 LINE L2 -493 2821 2712 1231 182 0 10 chr5 68387676 68387885 -134697647 + AluJo SINE Alu 86 292 -20 405 314 119 63 chr5 68387926 68388481 -134697051 - L2 LINE L2 -816 2498 1913 349 247 163 39 chr5 68388819 68388997 -134696535 - LTR16A LTR ERVL -235 215 16 419 296 136 23 chr5 68389831 68390051 -134695481 + MIR SINE MIR 10 254 -8 2130 119 0 3 chr5 68390059 68390354 -134695178 + AluSg1 SINE Alu 1 294 -15 684 276 65 4 chr5 68390696 68390928 -134694604 - MLT1L LTR MaLR -2 613 368 2684 38 0 13 chr5 68390984 68391299 -134694233 + AluY SINE Alu 1 311 0 477 240 40 32 chr5 68391299 68391424 -134694108 - MLT1L LTR MaLR -338 277 152 447 306 37 0 chr5 68391452 68391560 -134693972 + L2 LINE L2 3161 3272 0 41 87 0 0 chr5 68392981 68393085 -134692447 + AT_rich Low_complexity Low_complexity 1 104 0 2280 99 10 3 chr5 68393091 68393395 -134692137 + AluSx SINE Alu 1 306 -6 662 281 81 37 chr5 68393637 68393983 -134691549 - MLT1J2 LTR MaLR -36 410 19 425 315 13 34 chr5 68394006 68394244 -134691288 + L1MC4a LINE L1 5694 5926 -1882 390 231 94 83 chr5 68394244 68394521 -134691011 + L1MC4a LINE L1 5711 5990 -1818 713 257 90 0 chr5 68394703 68394925 -134690607 - L2 LINE L2 -939 2375 2134 498 267 42 18 chr5 68394925 68395090 -134690442 - L1ME4a LINE L1 -8 6113 5945 231 36 0 0 chr5 68395268 68395296 -134690236 + (TC)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr5 68395295 68395319 -134690213 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 1090 291 170 7 chr5 68395490 68395936 -134689596 + LTR33 LTR ERVL 1 519 -2 260 380 88 0 chr5 68396329 68396442 -134689090 + MER91A DNA MER1_type 1 123 -73 26 50 0 0 chr5 68397078 68397118 -134688414 + AT_rich Low_complexity Low_complexity 1 40 0 273 315 43 0 chr5 68397493 68397585 -134687947 + L3b LINE CR1 1364 1459 -124 757 246 86 32 chr5 68398577 68398797 -134686735 - MIR SINE MIR -12 250 19 22 80 0 0 chr5 68398864 68398914 -134686618 + AT_rich Low_complexity Low_complexity 1 50 0 2288 107 3 0 chr5 68399379 68399688 -134685844 - AluSx SINE Alu -2 310 1 496 254 14 22 chr5 68401321 68401459 -134684073 + MER5A DNA MER1_type 52 188 -1 653 295 36 10 chr5 68401636 68401829 -134683703 - MER115 DNA AcHobo -438 255 58 2593 33 7 3 chr5 68402327 68402626 -134682906 - AluY SINE Alu -11 300 1 729 237 183 9 chr5 68403412 68403631 -134681901 + MIR SINE MIR 6 262 0 411 283 144 0 chr5 68403851 68404031 -134681501 - MIR SINE MIR -10 252 47 1995 142 0 16 chr5 68404037 68404353 -134681179 - AluJo SINE Alu -1 311 1 495 0 0 0 chr5 68404746 68404801 -134680731 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2313 101 0 0 chr5 68405098 68405394 -134680138 - AluSx SINE Alu -16 296 1 25 0 0 0 chr5 68405446 68405471 -134680061 + AT_rich Low_complexity Low_complexity 1 25 0 1534 108 0 0 chr5 68405547 68405750 -134679782 - AluY SINE Alu -21 290 88 2328 97 7 0 chr5 68406924 68407222 -134678310 - AluSq SINE Alu -13 300 1 676 209 310 45 chr5 68407701 68407969 -134677563 + MLT1D LTR MaLR 1 339 -166 * 2195 148 36 44 chr5 68407956 68407999 -134677533 - MLT2D LTR ERVL -6 408 366 297 0 0 0 chr5 68407999 68408032 -134677500 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 2195 148 36 44 chr5 68408032 68408171 -134677361 - MLT2D LTR ERVL -48 366 227 2295 107 7 3 chr5 68408171 68408481 -134677051 + AluSp SINE Alu 1 311 -2 2195 148 36 44 chr5 68408481 68408708 -134676824 - MLT2D LTR ERVL -187 227 1 703 187 162 43 chr5 68409459 68409569 -134675963 + Charlie4a DNA MER1_type 126 222 -1739 2369 90 0 3 chr5 68409569 68409870 -134675662 + AluSx SINE Alu 1 300 -12 703 187 162 43 chr5 68409870 68410037 -134675495 + Charlie4a DNA MER1_type 222 436 -72 824 176 0 0 chr5 68410044 68410175 -134675357 + AluJo SINE Alu 4 134 -178 414 149 27 14 chr5 68410175 68410249 -134675283 + Charlie4a DNA MER1_type 431 505 -3 291 214 7 136 chr5 68412563 68412703 -134672829 + MLT1K LTR MaLR 465 586 -2 37 39 0 0 chr5 68412714 68412765 -134672767 + AT_rich Low_complexity Low_complexity 1 51 0 2439 237 11 22 chr5 68413339 68413883 -134671649 + MLT1F LTR MaLR 3 540 -2 407 274 78 83 chr5 68413900 68414130 -134671402 + MLT1K LTR MaLR 201 429 -159 827 201 28 0 chr5 68414349 68414493 -134671039 + AluJb SINE Alu 153 300 -12 822 242 64 27 chr5 68414545 68414909 -134670623 + MLT2F LTR ERVL 1 419 -244 228 247 161 11 chr5 68415236 68415329 -134670203 + MER5A DNA MER1_type 58 164 -25 * 332 336 9 17 chr5 68415246 68415362 -134670170 - MER5A DNA MER1_type -71 118 4 451 306 151 67 chr5 68415372 68415803 -134669729 - L2 LINE L2 -556 2758 2292 577 240 152 5 chr5 68417177 68417421 -134668111 + MLT1J LTR MaLR 3 313 -198 768 294 77 0 chr5 68417487 68417735 -134667797 + LTR16A LTR ERVL 64 330 -120 574 282 65 45 chr5 68417742 68418062 -134667470 + L2 LINE L2 2894 3301 -12 253 43 65 0 chr5 68418074 68418120 -134667412 + T-rich Low_complexity Low_complexity 2 50 0 1988 139 0 4 chr5 68418123 68418403 -134667129 - AluSx SINE Alu -33 279 1 188 71 0 0 chr5 68418403 68418431 -134667101 + L2 LINE L2 3286 3313 0 226 226 81 0 chr5 68419229 68419291 -134666241 + MER91C DNA MER1_type 22 88 -52 373 180 11 45 chr5 68419813 68419902 -134665630 - MLT1I LTR MaLR -6 403 318 2464 81 0 7 chr5 68420775 68421084 -134664448 + AluY SINE Alu 1 307 -4 2214 114 0 0 chr5 68421368 68421658 -134663874 + AluSx SINE Alu 1 290 -22 2148 103 0 14 chr5 68421769 68422060 -134663472 + AluY SINE Alu 4 290 -21 25699 72 20 4 chr5 68422099 68426480 -134659052 + L1P LINE L1 2 4455 -1691 19350 39 2 30 chr5 68426580 68429057 -134656475 + L1P LINE L1 1550 3955 -2191 2235 55 0 11 chr5 68429062 68429337 -134656195 - AluY SINE Alu -19 292 21 239 247 0 103 chr5 68429352 68429449 -134656083 - MLT1J1 LTR MaLR -74 372 286 241 179 179 0 chr5 68429544 68429600 -134655932 - MLT1J2 LTR MaLR -288 162 97 215 170 0 38 chr5 68429801 68429854 -134655678 + T-rich Low_complexity Low_complexity 5 55 0 2135 116 3 3 chr5 68429877 68430170 -134655362 + AluSp SINE Alu 1 293 -20 923 152 8 0 chr5 68430202 68430334 -134655198 + FLAM_A SINE Alu 1 133 0 251 202 48 24 chr5 68430358 68430442 -134655090 - L1MC5 LINE L1 -273 7688 7603 475 306 126 73 chr5 68431397 68431865 -134653667 - MLT1K LTR MaLR 0 588 96 183 393 9 0 chr5 68432452 68432559 -134652973 + L2 LINE L2 2565 2672 -642 675 254 112 15 chr5 68432608 68432813 -134652719 - MIR SINE MIR -15 247 23 623 218 90 111 chr5 68434031 68434308 -134651224 + L1MC4a LINE L1 5581 5862 -259 1830 158 3 10 chr5 68434308 68434599 -134650933 + AluJb SINE Alu 1 289 -23 207 0 0 0 chr5 68434601 68434624 -134650908 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 234 0 0 0 chr5 68434623 68434649 -134650883 + (TA)n Simple_repeat Simple_repeat 1 26 0 623 218 90 111 chr5 68434624 68434735 -134650797 + L1MC4a LINE L1 5863 5945 -176 231 36 0 0 chr5 68434740 68434768 -134650764 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1132 171 21 5 chr5 68434770 68434963 -134650569 - AluJo SINE Alu -30 282 87 21 36 0 0 chr5 68434963 68434991 -134650541 + AT_rich Low_complexity Low_complexity 1 28 0 451 307 40 28 chr5 68434991 68435167 -134650365 + MER5A DNA MER1_type 12 189 0 967 179 5 32 chr5 68435255 68435445 -134650087 - AluJo SINE Alu -2 310 126 2029 118 6 53 chr5 68435587 68435908 -134649624 + AluSx SINE Alu 1 306 -6 452 313 259 8 chr5 68435972 68436411 -134649121 - L2 LINE L2 -1 3271 2714 571 184 0 0 chr5 68436483 68436570 -134648962 - AluJo SINE Alu -224 88 2 2316 102 0 0 chr5 68436617 68436911 -134648621 + AluSx SINE Alu 1 294 -18 208 310 16 54 chr5 68436920 68437049 -134648483 - MIR SINE MIR -47 215 92 1963 117 14 14 chr5 68437540 68437841 -134647691 + AluY SINE Alu 1 301 0 21 36 0 0 chr5 68437893 68437921 -134647611 + AT_rich Low_complexity Low_complexity 1 28 0 2302 93 0 0 chr5 68438394 68438695 -134646837 + AluSx SINE Alu 1 301 -11 225 233 23 23 chr5 68439913 68439999 -134645533 + C-rich Low_complexity Low_complexity 6 91 0 2190 80 35 3 chr5 68441191 68441480 -134644052 - AluSq SINE Alu -15 298 1 2004 208 93 63 chr5 68441939 68442559 -134642973 + L1MA9 LINE L1 5624 6262 -50 22 0 0 0 chr5 68442570 68442592 -134642940 + AT_rich Low_complexity Low_complexity 1 22 0 2071 112 56 0 chr5 68443630 68443916 -134641616 - AluSx SINE Alu -10 302 1 349 308 54 23 chr5 68444608 68444738 -134640794 - MIR3 SINE MIR -7 201 68 336 242 114 79 chr5 68445389 68445579 -134639953 - MIR SINE MIR -46 216 21 204 40 0 0 chr5 68446089 68446114 -134639418 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 549 253 10 0 chr5 68446356 68446455 -134639077 + FAM SINE Alu 1 100 -85 425 302 0 9 chr5 68446593 68446699 -134638833 - L2 LINE L2 -5 3267 3163 272 273 99 16 chr5 68446830 68446924 -134638608 - MER117 DNA MER1_type -3 194 86 2276 82 0 10 chr5 68446924 68447215 -134638317 - AluSg SINE Alu -22 288 1 272 273 99 16 chr5 68447215 68447241 -134638291 - MER117 DNA MER1_type -111 86 64 1938 151 21 0 chr5 68447368 68447653 -134637879 - AluJo SINE Alu -21 291 1 1842 161 10 0 chr5 68447746 68448037 -134637495 + AluJo SINE Alu 1 294 -18 2415 102 0 0 chr5 68448322 68448626 -134636906 - AluSx SINE Alu -8 304 1 685 134 84 17 chr5 68448626 68448734 -134636798 - Tigger4(Zombi) DNA MER2_type -2581 150 32 205 235 20 0 chr5 68448753 68448804 -134636728 + MER5B DNA MER1_type 3 54 -124 198 0 0 0 chr5 68448813 68448835 -134636697 + (A)n Simple_repeat Simple_repeat 1 22 0 196 306 161 0 chr5 68448849 68448911 -134636621 - MER5B DNA MER1_type -56 122 51 1737 150 75 0 chr5 68450072 68450366 -134635166 + L1MC1 LINE L1 5988 6303 -30 2208 108 7 0 chr5 68450613 68450908 -134634624 - AluSp SINE Alu -16 297 1 316 265 24 12 chr5 68451039 68451122 -134634410 - MIR SINE MIR -151 111 28 2295 96 0 0 chr5 68451649 68451941 -134633591 - AluSc SINE Alu -17 292 1 435 342 189 14 chr5 68452190 68452704 -134632828 + L2 LINE L2 2043 2646 -668 261 0 0 0 chr5 68452721 68452750 -134632782 + (CAA)n Simple_repeat Simple_repeat 2 30 0 240 86 0 0 chr5 68453440 68453475 -134632057 + (TATG)n Simple_repeat Simple_repeat 2 36 0 947 290 60 30 chr5 68453687 68454087 -134631445 - L1MC4a LINE L1 -1930 5878 5467 3970 175 46 54 chr5 68454359 68455114 -134630418 - L1MB7 LINE L1 -52 6132 5372 207 0 0 0 chr5 68455114 68455137 -134630395 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1559 192 14 0 chr5 68455143 68455419 -134630113 - AluJb SINE Alu -32 280 1 3970 175 46 54 chr5 68455419 68455483 -134630049 - L1MB7 LINE L1 -817 5367 5304 1563 175 10 45 chr5 68455483 68455792 -134629740 - AluJb SINE Alu -14 298 1 3970 175 46 54 chr5 68455792 68456019 -134629513 - L1MB7 LINE L1 -880 5304 5069 2298 85 10 0 chr5 68456536 68456830 -134628702 + AluSp SINE Alu 1 297 -16 1676 75 0 9 chr5 68456896 68457108 -134628424 + AluY SINE Alu 96 305 -6 321 229 139 25 chr5 68457136 68457258 -134628274 + L1MC5 LINE L1 7719 7854 -107 1840 172 13 0 chr5 68457318 68457620 -134627912 + AluJb SINE Alu 2 307 -5 4403 193 34 8 chr5 68457664 68458593 -134626939 + L1PA16 LINE L1 4379 5332 -814 406 137 8 145 chr5 68458595 68458675 -134626857 + MER50 LTR ERV1 498 558 -176 2169 90 4 0 chr5 68458675 68458980 -134626552 - AluSx SINE Alu 0 310 5 406 137 8 145 chr5 68458980 68459022 -134626510 + MER50 LTR ERV1 558 604 -130 1392 136 30 3 chr5 68459027 68459699 -134625833 + L1PA16 LINE L1 5317 6162 -4 1216 257 302 24 chr5 68459906 68460274 -134625258 + L2 LINE L2 609 873 -2441 1583 157 0 4 chr5 68460274 68460522 -134625010 + AluJb SINE Alu 1 247 -65 1216 257 302 24 chr5 68460522 68460821 -134624711 + L2 LINE L2 873 1088 -2226 899 184 123 19 chr5 68460821 68461033 -134624499 - MER106A DNA MER1_type -2 234 1 1216 257 302 24 chr5 68461033 68461162 -134624370 + L2 LINE L2 1088 2367 -947 2148 100 3 3 chr5 68462059 68462350 -134623182 - AluSp SINE Alu -22 291 1 184 328 33 0 chr5 68463017 68463078 -134622454 + MIR SINE MIR 64 126 -82 1702 175 37 0 chr5 68463625 68463922 -134621610 + AluJb SINE Alu 1 308 -4 22 0 0 0 chr5 68464466 68464488 -134621044 + AT_rich Low_complexity Low_complexity 1 22 0 2255 105 3 0 chr5 68464686 68464982 -134620550 + AluSp SINE Alu 1 297 -16 1029 148 6 19 chr5 68465000 68465162 -134620370 + AluSg/x SINE Alu 139 298 -14 30 77 0 0 chr5 68466077 68466142 -134619390 + AT_rich Low_complexity Low_complexity 1 65 0 316 115 39 0 chr5 68466176 68466228 -134619304 - MER116 DNA Mariner 0 80 27 368 130 14 0 chr5 68468057 68468126 -134617406 + CT-rich Low_complexity Low_complexity 1 70 0 34 0 0 0 chr5 68469276 68469310 -134616222 + AT_rich Low_complexity Low_complexity 1 34 0 951 262 111 17 chr5 68470035 68470512 -134615020 + L1M4 LINE L1 2812 3333 -2813 359 248 113 116 chr5 68470578 68470768 -134614764 + L1M4 LINE L1 3439 3628 -2518 2228 98 7 0 chr5 68470768 68471063 -134614469 + AluSx SINE Alu 1 297 -15 359 248 113 116 chr5 68471063 68471109 -134614423 + L1M4 LINE L1 3628 3673 -2473 1546 155 83 14 chr5 68471109 68471387 -134614145 + AluJo SINE Alu 1 297 -15 359 248 113 116 chr5 68471387 68471459 -134614073 + L1M4 LINE L1 3673 3747 -2399 411 223 48 131 chr5 68471461 68471690 -134613842 + L1M4 LINE L1 4584 4793 -1353 515 213 60 70 chr5 68471794 68471853 -134613679 + L1M4 LINE L1 4976 5034 -1112 1898 156 0 3 chr5 68471853 68472148 -134613384 - AluSx SINE Alu -18 294 1 515 213 60 70 chr5 68472148 68472388 -134613144 + L1M4 LINE L1 5034 5272 -874 216 0 0 0 chr5 68673659 68673683 -134411849 + (CA)n Simple_repeat Simple_repeat 2 25 0 197 215 138 62 chr5 68673823 68673888 -134411644 - MIR SINE MIR -70 192 123 563 80 0 0 chr5 68673934 68674009 -134411523 - Alu SINE Alu -235 75 1 1906 122 14 14 chr5 68674016 68674310 -134411222 - AluSx SINE Alu -18 294 1 2146 102 3 3 chr5 68675211 68675504 -134410028 - AluSp SINE Alu -20 293 1 198 383 85 0 chr5 68676138 68676232 -134409300 + MIR SINE MIR 25 126 -82 1723 175 37 0 chr5 68676781 68677078 -134408454 + AluJb SINE Alu 1 308 -4 22 0 0 0 chr5 68677622 68677644 -134407888 + AT_rich Low_complexity Low_complexity 1 22 0 2258 105 3 0 chr5 68677842 68678138 -134407394 + AluSp SINE Alu 1 297 -16 1038 148 6 19 chr5 68678156 68678318 -134407214 + AluSg/x SINE Alu 139 298 -14 30 77 0 0 chr5 68679234 68679299 -134406233 + AT_rich Low_complexity Low_complexity 1 65 0 294 100 40 0 chr5 68679333 68679383 -134406149 - MER116 DNA Mariner 0 80 29 368 130 14 0 chr5 68681212 68681281 -134404251 + CT-rich Low_complexity Low_complexity 1 70 0 34 0 0 0 chr5 68682431 68682465 -134403067 + AT_rich Low_complexity Low_complexity 1 34 0 703 247 155 58 chr5 68683190 68683923 -134401609 + L1ME3A LINE L1 2812 3472 -2674 2222 98 7 0 chr5 68683923 68684218 -134401314 + AluSx SINE Alu 1 297 -15 703 247 155 58 chr5 68684218 68684264 -134401268 + L1ME3A LINE L1 3472 3512 -2634 1564 155 83 14 chr5 68684264 68684542 -134400990 + AluJo SINE Alu 1 297 -15 703 247 155 58 chr5 68684542 68684612 -134400920 + L1ME3A LINE L1 3512 3745 -2401 322 223 48 131 chr5 68684616 68684845 -134400687 + L1ME3A LINE L1 4584 4793 -1353 439 217 58 67 chr5 68684949 68685008 -134400524 + L1ME3A LINE L1 4976 5034 -1112 1898 159 0 3 chr5 68685008 68685303 -134400229 - AluSx SINE Alu -18 294 1 439 217 58 67 chr5 68685303 68685556 -134399976 + L1ME3A LINE L1 5034 5285 -861 1778 119 129 95 chr5 68685755 68686165 -134399367 - MSTA LTR MaLR 0 428 5 540 316 47 9 chr5 68686208 68686547 -134398985 + L1ME3A LINE L1 5595 5946 -224 2304 94 10 3 chr5 68686651 68686949 -134398583 - AluSq SINE Alu -12 301 2 40 37 0 0 chr5 68687502 68687556 -134397976 + AT_rich Low_complexity Low_complexity 1 54 0 1804 159 10 7 chr5 68688020 68688315 -134397217 - AluJo SINE Alu -16 296 1 697 310 77 51 chr5 68689084 68689452 -134396080 + LTR16B LTR ERVL 1 354 -110 2298 89 13 13 chr5 68689452 68689765 -134395767 - AluSq SINE Alu 0 313 1 697 310 77 51 chr5 68689765 68689879 -134395653 + LTR16B LTR ERVL 354 464 0 1219 216 33 49 chr5 68690184 68690490 -134395042 - L2 LINE L2 -464 2850 2550 241 238 12 75 chr5 68690497 68690577 -134394955 + MER5B DNA MER1_type 98 172 -6 288 297 198 31 chr5 68690665 68690777 -134394755 + MIR SINE MIR 8 100 -162 2321 74 3 17 chr5 68690777 68691075 -134394457 + AluSc SINE Alu 1 294 -15 288 297 198 31 chr5 68691075 68691154 -134394378 + MIR SINE MIR 100 231 -31 272 269 216 0 chr5 68691284 68691492 -134394040 + L1ME LINE L1 5571 5823 -298 1406 93 0 56 chr5 68691677 68691819 -134393713 + AluSx SINE Alu 1 129 -183 2303 99 0 0 chr5 68691819 68692112 -134393420 + AluSx SINE Alu 1 293 -19 1406 93 0 56 chr5 68692112 68692184 -134393348 + AluSx SINE Alu 129 203 -109 183 80 0 0 chr5 68692195 68692220 -134393312 + (A)n Simple_repeat Simple_repeat 1 25 0 814 156 0 30 chr5 68692229 68692364 -134393168 + FLAM_C SINE Alu 1 131 -12 26 50 0 0 chr5 68692632 68692672 -134392860 + AT_rich Low_complexity Low_complexity 1 40 0 416 272 50 0 chr5 68692683 68692863 -134392669 + L1ME LINE L1 5635 5823 -298 1862 166 7 0 chr5 68693173 68693462 -134392070 + AluSx SINE Alu 3 293 -19 2222 124 7 0 chr5 68694338 68694637 -134390895 - AluJb SINE Alu -11 301 1 209 133 0 0 chr5 68695900 68695930 -134389602 + MER5B DNA MER1_type 11 40 -138 69 48 0 0 chr5 68695945 68696049 -134389483 + AT_rich Low_complexity Low_complexity 1 104 0 492 252 8 16 chr5 68696055 68696182 -134389350 - MER5B DNA MER1_type -45 133 8 553 195 172 0 chr5 68696448 68696576 -134388956 + MIR SINE MIR 97 246 -16 1947 155 13 3 chr5 68696979 68697288 -134388244 - AluJb SINE Alu 0 312 1 2231 99 3 3 chr5 68697345 68697639 -134387893 + AluSx SINE Alu 3 296 -16 2011 135 4 0 chr5 68697663 68697979 -134387553 + AluSx SINE Alu 1 317 0 35 41 0 0 chr5 68698359 68698408 -134387124 + AT_rich Low_complexity Low_complexity 1 49 0 2250 108 3 0 chr5 68698586 68698883 -134386649 + AluSx SINE Alu 2 299 -13 22 0 0 0 chr5 68699272 68699294 -134386238 + AT_rich Low_complexity Low_complexity 1 22 0 1966 80 60 60 chr5 68702513 68702812 -134382720 - AluSx SINE Alu -13 299 1 707 221 101 69 chr5 68703025 68703242 -134382290 - MER58A DNA MER1_type 0 224 1 1979 135 35 0 chr5 68703500 68703789 -134381743 - AluSx SINE Alu -12 300 2 2009 137 7 20 chr5 68703797 68704097 -134381435 - AluSx SINE Alu -16 296 1 2020 137 0 10 chr5 68705395 68705687 -134379845 - AluJb SINE Alu -23 289 1 232 257 88 53 chr5 68705960 68706131 -134379401 + Tigger8 DNA MER2_type 174 350 -316 2380 86 7 0 chr5 68706701 68707003 -134378529 - AluSq SINE Alu -9 304 1 2352 81 0 3 chr5 68707116 68707413 -134378119 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr5 68708416 68708437 -134377095 + AT_rich Low_complexity Low_complexity 1 21 0 2194 110 0 32 chr5 68708453 68708762 -134376770 + AluSx SINE Alu 1 299 -13 37 0 0 0 chr5 68708923 68708960 -134376572 + AT_rich Low_complexity Low_complexity 1 37 0 527 103 75 19 chr5 68709275 68709382 -134376150 - L1MB3 LINE L1 -3 6180 6068 1852 161 0 4 chr5 68709561 68709841 -134375691 - AluJo SINE Alu -33 279 1 2303 95 0 0 chr5 68710865 68711159 -134374373 - AluSg SINE Alu -16 294 1 2106 122 7 0 chr5 68711526 68711821 -134373711 + AluSx SINE Alu 1 297 -15 203 175 0 25 chr5 68712279 68712319 -134373213 + CT-rich Low_complexity Low_complexity 4 42 0 827 241 73 100 chr5 68712320 68712960 -134372572 - L1ME LINE L1 -5380 690 68 2505 58 0 0 chr5 68713269 68713560 -134371972 + AluY SINE Alu 7 297 -14 2340 112 0 6 chr5 68713967 68714280 -134371252 - AluSx SINE Alu -1 311 1 333 301 49 71 chr5 68714720 68714903 -134370629 - L1ME3A LINE L1 0 6170 5992 2014 166 0 0 chr5 68715208 68715503 -134370029 + AluJb SINE Alu 1 295 -17 2047 128 52 27 chr5 68715921 68716287 -134369245 - THE1C LTR MaLR 0 375 1 605 333 26 13 chr5 68716559 68716787 -134368745 + MIR SINE MIR 6 236 -26 2105 99 3 11 chr5 68717002 68717309 -134368223 - AluSx SINE Alu 0 305 1 1657 155 53 7 chr5 68717698 68717982 -134367550 + AluJo SINE Alu 1 297 -15 258 224 53 0 chr5 68718112 68718188 -134367344 + MER116 DNA Mariner 1 80 0 416 311 158 10 chr5 68718230 68718439 -134367093 + MIR SINE MIR 13 252 -10 983 201 36 0 chr5 68718573 68718767 -134366765 - MER105 DNA DNA -3 201 1 714 113 9 0 chr5 68719667 68719773 -134365759 + AluSq/x SINE Alu 1 107 -205 22 0 0 0 chr5 68719773 68719795 -134365737 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr5 68719868 68719912 -134365620 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 68720083 68720106 -134365426 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr5 68720165 68720205 -134365327 + AT_rich Low_complexity Low_complexity 1 40 0 1588 206 3 7 chr5 68720647 68720934 -134364598 + AluJo SINE Alu 5 290 -22 785 204 138 5 chr5 68720947 68721143 -134364389 + MER58A DNA MER1_type 1 222 -2 1927 112 51 0 chr5 68721371 68721647 -134363885 + AluSx SINE Alu 1 290 -22 24 53 0 0 chr5 68721772 68721810 -134363722 + AT_rich Low_complexity Low_complexity 1 38 0 547 304 98 0 chr5 68722042 68722246 -134363286 - MIR SINE MIR -10 252 29 736 205 128 5 chr5 68722424 68722619 -134362913 + MER20 DNA MER1_type 1 219 0 2186 99 0 3 chr5 68723115 68723433 -134362099 - AluSx SINE Alu 0 317 1 230 27 81 0 chr5 68723436 68723473 -134362059 + T-rich Low_complexity Low_complexity 2 41 0 1241 210 26 9 chr5 68723552 68723785 -134361747 + MER8 DNA MER2_type 2 238 -1 1925 121 43 0 chr5 68725348 68725630 -134359902 + AluJb SINE Alu 1 294 -18 794 133 0 25 chr5 68725723 68725843 -134359689 + FLAM_C SINE Alu 18 134 -9 2212 107 17 0 chr5 68726093 68726392 -134359140 + AluSp SINE Alu 1 304 -9 2115 114 7 7 chr5 68726608 68726906 -134358626 - AluSx SINE Alu -14 298 1 2344 138 88 9 chr5 68727201 68727620 -134357912 - Tigger2 DNA MER2_type 0 2718 2267 424 125 31 0 chr5 68727607 68727671 -134357861 - Tigger2 DNA MER2_type -2652 66 1 * 1835 150 7 0 chr5 68728301 68728575 -134356957 - AluJo SINE Alu -36 276 1 22 56 0 0 chr5 68728907 68728943 -134356589 + AT_rich Low_complexity Low_complexity 1 36 0 1287 133 14 43 chr5 68728949 68729159 -134356373 + AluJo SINE Alu 85 288 -24 228 146 91 0 chr5 68729165 68729220 -134356312 - L1MA8 LINE L1 -10 6281 6222 586 124 0 0 chr5 68729220 68729309 -134356223 - Tigger4(Zombi) DNA MER2_type 0 2731 2643 2042 127 24 0 chr5 68729347 68729639 -134355893 - AluSq SINE Alu -14 299 1 2152 125 7 0 chr5 68729643 68729939 -134355593 - AluSx SINE Alu -14 298 1 2548 70 0 3 chr5 68729943 68730255 -134355277 - AluY SINE Alu 0 311 1 2081 95 0 42 chr5 68730685 68730969 -134354563 + AluSx SINE Alu 19 290 -22 1143 210 23 5 chr5 68731116 68731330 -134354202 - MER20 DNA MER1_type -1 218 1 2207 106 3 3 chr5 68731574 68731866 -134353666 + AluSx SINE Alu 2 293 -19 188 372 12 12 chr5 68734238 68734324 -134351208 - MIR3 SINE MIR -14 194 109 22 0 0 0 chr5 68734674 68734696 -134350836 + AT_rich Low_complexity Low_complexity 1 22 0 2367 99 0 0 chr5 68735916 68736218 -134349314 + AluSx SINE Alu 1 302 -10 286 160 0 20 chr5 68739799 68739849 -134345683 + L1ME3 LINE L1 6018 6066 -96 22 35 0 0 chr5 68739949 68739978 -134345554 + AT_rich Low_complexity Low_complexity 1 29 0 857 159 8 0 chr5 68739978 68740104 -134345428 + FLAM_A SINE Alu 1 127 -6 1646 162 62 7 chr5 68740897 68741187 -134344345 + AluJb SINE Alu 1 306 -6 2348 94 0 0 chr5 68741739 68742037 -134343495 - AluSq SINE Alu -15 298 1 511 237 88 76 chr5 68742123 68742372 -134343160 + MER112 DNA MER1_type 4 255 -1 7799 112 20 77 chr5 68742391 68742438 -134343094 - HSMAR2 DNA Mariner -6 1296 1248 1493 166 69 31 chr5 68742438 68742727 -134342805 + AluJb SINE Alu 6 305 -7 7799 112 20 77 chr5 68742727 68742937 -134342595 - HSMAR2 DNA Mariner -54 1248 1028 1564 179 14 10 chr5 68742937 68743233 -134342299 + AluJb SINE Alu 1 297 -15 7799 112 20 77 chr5 68743233 68743666 -134341866 - HSMAR2 DNA Mariner -274 1028 572 1994 107 35 24 chr5 68743666 68743956 -134341576 - AluSx SINE Alu -19 293 1 7799 112 20 77 chr5 68743956 68744365 -134341167 - HSMAR2 DNA Mariner -730 572 286 2409 47 0 0 chr5 68744365 68744644 -134340888 - AluY SINE Alu -16 295 17 7799 112 20 77 chr5 68744644 68744913 -134340619 - HSMAR2 DNA Mariner -1016 286 3 198 311 0 0 chr5 68744920 68744965 -134340567 - L2 LINE L2 -675 2639 2595 27 0 0 0 chr5 68745595 68745622 -134339910 + AT_rich Low_complexity Low_complexity 1 27 0 2216 103 0 23 chr5 68745762 68745897 -134339635 + AluSg SINE Alu 1 138 -172 2138 127 3 3 chr5 68745897 68746205 -134339327 + AluSx SINE Alu 1 308 -4 2216 103 0 23 chr5 68746205 68746370 -134339162 + AluSg SINE Alu 138 294 -16 1749 111 4 4 chr5 68746376 68746644 -134338888 + AluSg SINE Alu 40 307 0 21 0 0 0 chr5 68746947 68746968 -134338564 + AT_rich Low_complexity Low_complexity 1 21 0 1734 145 3 27 chr5 68746968 68747265 -134338267 - AluJo SINE Alu -22 290 1 827 168 0 0 chr5 68747265 68747396 -134338136 - AluJo/FLAM SINE Alu -181 131 1 1733 150 32 0 chr5 68747472 68747752 -134337780 - AluJb SINE Alu -13 299 11 318 268 116 12 chr5 68747762 68747906 -134337626 + LTR33 LTR ERVL 11 200 -321 267 153 85 0 chr5 68747912 68747925 -134337607 + LTR33A LTR ERVL 446 456 -67 2097 134 7 0 chr5 68747925 68748231 -134337301 + AluSq SINE Alu 1 308 -5 267 153 85 0 chr5 68748231 68748276 -134337256 + LTR33A LTR ERVL 456 509 -14 2438 92 0 0 chr5 68748286 68748592 -134336940 - AluSc SINE Alu -3 306 1 231 229 0 0 chr5 68749859 68749907 -134335625 - L2 LINE L2 -1 3271 3224 2567 46 0 0 chr5 68751110 68751412 -134334120 + AluY SINE Alu 1 302 -9 265 218 36 0 chr5 68751609 68751664 -134333868 - L2 LINE L2 -2 3311 3255 1700 148 58 0 chr5 68752120 68752397 -134333135 + AluJo SINE Alu 1 293 -19 1486 182 8 0 chr5 68752449 68752707 -134332825 - AluJb SINE Alu -10 302 43 401 104 13 0 chr5 68753173 68753250 -134332282 + (TA)n Simple_repeat Simple_repeat 2 79 0 1749 135 10 47 chr5 68753250 68753546 -134331986 - AluSx SINE Alu -27 285 1 524 162 0 0 chr5 68753591 68753665 -134331867 + AluSg/x SINE Alu 207 280 -29 843 115 0 0 chr5 68753665 68753795 -134331737 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2071 120 65 0 chr5 68753856 68754148 -134331384 + AluSx SINE Alu 1 311 -1 719 186 145 0 chr5 68754325 68754470 -134331062 - MER93a LTR ERV1 0 402 237 698 88 0 0 chr5 68754468 68754559 -134330973 - MER93b LTR ERV1 -282 91 1 * 1656 195 26 0 chr5 68754670 68754972 -134330560 - AluJb SINE Alu -2 310 1 55 56 0 0 chr5 68754978 68755068 -134330464 + AT_rich Low_complexity Low_complexity 1 90 0 758 167 0 30 chr5 68755068 68755200 -134330332 + FLAM_A SINE Alu 11 138 -4 1096 98 0 93 chr5 68755249 68755443 -134330089 + AluY SINE Alu 133 308 -3 289 290 26 45 chr5 68755503 68755658 -134329874 - L1ME LINE L1 -396 5725 5574 762 93 0 0 chr5 68755659 68755756 -134329776 - AluSg/x SINE Alu -11 299 203 1952 176 148 23 chr5 68755961 68756399 -134329133 - MLT1D LTR MaLR -10 495 3 378 211 211 18 chr5 68756414 68756528 -134329004 + MER5A DNA MER1_type 53 188 -1 2264 99 3 7 chr5 68756531 68756835 -134328697 - AluSp SINE Alu -10 303 1 261 164 29 87 chr5 68756856 68756960 -134328572 - L1ME4a LINE L1 -49 6072 5975 30 27 0 0 chr5 68757051 68757088 -134328444 + AT_rich Low_complexity Low_complexity 1 37 0 2115 107 0 3 chr5 68757088 68757378 -134328154 - AluSx SINE Alu -23 289 1 2236 112 0 0 chr5 68757380 68757675 -134327857 - AluSx SINE Alu -17 295 1 895 250 13 9 chr5 68757813 68758041 -134327491 + MIR SINE MIR 34 262 0 2285 87 0 3 chr5 68758077 68758383 -134327149 - AluSp SINE Alu 0 305 1 25 0 0 0 chr5 68758421 68758446 -134327086 + AT_rich Low_complexity Low_complexity 1 25 0 2138 94 0 0 chr5 68758457 68758771 -134326761 - AluSg SINE Alu 0 318 5 683 203 0 0 chr5 68758782 68758794 -134326738 - FLAM_A SINE Alu -182 120 109 279 0 0 0 chr5 68758794 68758825 -134326707 + (TG)n Simple_repeat Simple_repeat 1 31 0 683 203 0 0 chr5 68758825 68758930 -134326602 - FLAM_A SINE Alu -192 110 3 213 223 259 27 chr5 68761356 68761468 -134324064 - MER5A DNA MER1_type -8 181 44 * 375 254 183 0 chr5 68761373 68761499 -134324033 + MER5A DNA MER1_type 40 188 -1 329 199 174 27 chr5 68761589 68761721 -134323811 - MIR3 SINE MIR -76 132 1 1947 105 14 11 chr5 68761876 68762161 -134323371 - AluSg SINE Alu -11 299 14 2383 86 3 0 chr5 68762176 68762479 -134323053 - AluSp SINE Alu -9 304 1 1712 184 41 61 chr5 68762657 68762881 -134322651 - MLT1B LTR MaLR -7 383 169 2424 77 6 0 chr5 68762881 68763192 -134322340 - AluSq SINE Alu 0 313 1 1712 184 41 61 chr5 68763192 68763358 -134322174 - MLT1B LTR MaLR -221 169 1 1703 166 0 35 chr5 68763427 68763746 -134321786 - AluJb SINE Alu -4 308 1 694 201 22 30 chr5 68763834 68763968 -134321564 - FLAM_A SINE Alu 0 133 1 233 280 121 132 chr5 68763979 68764518 -134321014 + L2 LINE L2 1773 2305 -1009 991 170 13 0 chr5 68764704 68764863 -134320669 - AluSp SINE Alu -13 300 140 2086 118 45 0 chr5 68764875 68765164 -134320368 - AluSq SINE Alu -11 302 1 421 326 28 14 chr5 68765234 68765452 -134320080 - L2 LINE L2 -159 3154 2934 6001 130 147 19 chr5 68765633 68766427 -134319105 - Tigger3b DNA MER2_type -1797 1231 540 1319 214 14 31 chr5 68766427 68766717 -134318815 + AluJo SINE Alu 5 289 -23 2291 96 7 7 chr5 68766720 68767022 -134318510 + AluSq SINE Alu 1 302 -11 6001 130 147 19 chr5 68767022 68767292 -134318240 - Tigger3b DNA MER2_type -2489 539 305 2042 110 3 7 chr5 68767292 68767582 -134317950 - AluJb SINE Alu -13 299 11 6001 130 147 19 chr5 68767582 68767602 -134317930 - Tigger3b DNA MER2_type -2723 305 3 640 317 72 18 chr5 68767632 68767966 -134317566 - L1ME LINE L1 -557 5609 5258 323 321 14 50 chr5 68768222 68768362 -134317170 + MIR3 SINE MIR 22 156 -52 2208 108 14 0 chr5 68768839 68769136 -134316396 - AluSq SINE Alu -12 301 1 442 223 21 88 chr5 68769482 68769675 -134315857 + L2 LINE L2 3134 3313 0 180 363 108 45 chr5 68770018 68770241 -134315291 - L2 LINE L2 -14 3258 3022 380 190 120 10 chr5 68770297 68770397 -134315135 - L1MC5 LINE L1 -60 7901 7791 319 94 16 78 chr5 68770403 68770467 -134315065 - L1MC5 LINE L1 -609 7352 7293 810 143 0 0 chr5 68770738 68770850 -134314682 - AluJb SINE Alu -20 292 181 2460 67 0 0 chr5 68770850 68771150 -134314382 - AluY SINE Alu -11 300 1 1366 142 64 95 chr5 68771154 68771449 -134314083 - AluJo SINE Alu -22 290 5 25 0 0 0 chr5 68771584 68771609 -134313923 + AT_rich Low_complexity Low_complexity 1 25 0 2382 95 0 0 chr5 68772025 68772329 -134313203 - AluSq SINE Alu -9 304 1 2186 125 0 0 chr5 68772816 68773119 -134312413 + AluSq SINE Alu 1 303 -10 51 31 0 0 chr5 68773478 68773543 -134311989 + AT_rich Low_complexity Low_complexity 1 65 0 2309 97 0 7 chr5 68773637 68773947 -134311585 - AluSq SINE Alu -1 312 5 2112 123 0 96 chr5 68774167 68774542 -134310990 + MER1B DNA MER1_type 1 339 0 284 272 97 19 chr5 68774583 68774686 -134310846 + MER20B DNA MER1_type 35 145 -638 841 163 8 16 chr5 68774911 68775040 -134310492 - FLAM_C SINE Alu -5 128 1 2272 103 0 0 chr5 68775053 68775353 -134310179 - AluSg SINE Alu -10 300 1 1448 164 38 38 chr5 68775383 68775676 -134309856 - AluJo SINE Alu -19 293 1 2764 164 57 37 chr5 68775725 68776105 -134309427 - L1MB8 LINE L1 -9 6169 5798 207 88 0 0 chr5 68776105 68776139 -134309393 + (TTTAA)n Simple_repeat Simple_repeat 3 36 0 1932 118 7 44 chr5 68776142 68776299 -134309233 - AluSg SINE Alu -25 285 124 393 22 0 0 chr5 68776299 68776345 -134309187 + (TG)n Simple_repeat Simple_repeat 2 47 0 2177 101 0 3 chr5 68776348 68776634 -134308898 - AluSg SINE Alu -25 285 1 1932 118 7 44 chr5 68776634 68776768 -134308764 - AluSg SINE Alu -188 122 1 2764 164 57 37 chr5 68776768 68777028 -134308504 - L1MB8 LINE L1 -381 5797 5512 1310 176 0 5 chr5 68777112 68777333 -134308199 - AluJb SINE Alu -92 220 1 207 0 0 0 chr5 68777363 68777386 -134308146 + (TTTAA)n Simple_repeat Simple_repeat 4 26 0 2073 102 13 30 chr5 68777392 68777695 -134307837 - AluSx SINE Alu -14 298 1 1910 131 14 10 chr5 68777698 68777988 -134307544 - AluSx SINE Alu -19 293 3 617 149 0 19 chr5 68777988 68778095 -134307437 + LTR38 LTR ERV1 66 170 -386 680 175 0 0 chr5 68778098 68778212 -134307320 - AluSg/x SINE Alu -9 303 190 1637 180 62 40 chr5 68778212 68778371 -134307161 + LTR38 LTR ERV1 166 320 -236 1927 149 4 0 chr5 68778371 68778646 -134306886 + AluSx SINE Alu 1 276 -36 342 0 0 0 chr5 68778646 68778684 -134306848 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1637 180 62 40 chr5 68778684 68778896 -134306636 + LTR38 LTR ERV1 319 546 -10 1910 244 53 9 chr5 68778913 68779437 -134306095 - L1M4b LINE L1 -6302 557 11 518 311 26 26 chr5 68779480 68779789 -134305743 - L1MC4 LINE L1 -544 7498 7190 195 327 0 0 chr5 68780281 68780333 -134305199 + L2 LINE L2 3207 3258 -14 474 308 133 12 chr5 68780757 68780997 -134304535 + L2 LINE L2 2811 3079 -234 1869 143 17 7 chr5 68781011 68781312 -134304220 - AluJo SINE Alu -8 304 1 615 100 56 200 chr5 68781313 68781454 -134304078 + Charlie5 DNA MER1_type 2333 2493 -131 2146 123 0 0 chr5 68781454 68781746 -134303786 + AluSx SINE Alu 1 292 -20 615 100 56 200 chr5 68781746 68781762 -134303770 + Charlie5 DNA MER1_type 2493 2510 -114 1194 107 0 0 chr5 68781762 68781939 -134303593 + (TA)n Simple_repeat Simple_repeat 1 177 0 615 100 56 200 chr5 68781939 68782030 -134303502 + Charlie5 DNA MER1_type 2510 2585 -39 1335 168 78 35 chr5 68782030 68782286 -134303246 + AluJo SINE Alu 1 267 -45 675 203 112 0 chr5 68782306 68782449 -134303083 + FRAM SINE Alu 1 159 -7 2167 98 25 0 chr5 68782458 68782743 -134302789 + AluSx SINE Alu 1 292 -20 463 244 129 38 chr5 68783523 68783810 -134301722 - MER113 DNA MER1_type? -110 411 99 27 29 0 0 chr5 68784291 68784325 -134301207 + AT_rich Low_complexity Low_complexity 1 34 0 2259 103 3 0 chr5 68785182 68785474 -134300058 + AluSq SINE Alu 1 293 -20 2373 103 0 0 chr5 68785489 68785789 -134299743 + AluY SINE Alu 1 300 -11 2414 63 10 3 chr5 68785996 68786298 -134299234 - AluY SINE Alu -7 304 1 526 116 53 32 chr5 68786303 68786398 -134299134 - FLAM_C SINE Alu -11 132 36 237 297 31 0 chr5 68786758 68786822 -134298710 - L2 LINE L2 0 3272 3207 2335 91 0 7 chr5 68787061 68787368 -134298164 - AluSx SINE Alu -7 305 1 2124 119 0 3 chr5 68787392 68787686 -134297846 + AluSx SINE Alu 1 293 -19 2124 120 7 3 chr5 68787907 68788208 -134297324 - AluSp SINE Alu -11 302 1 2350 96 3 6 chr5 68788211 68788525 -134297007 - AluSq SINE Alu 0 313 1 2355 89 0 0 chr5 68788560 68788852 -134296680 - AluSc SINE Alu -17 292 1 2093 94 7 17 chr5 68789285 68789615 -134295917 + AluSq SINE Alu 1 327 0 627 181 0 0 chr5 68789894 68789999 -134295533 + U6 snRNA snRNA 1 105 -2 414 57 0 0 chr5 68790101 68790154 -134295378 + (TG)n Simple_repeat Simple_repeat 1 53 0 573 209 0 0 chr5 68790218 68790328 -134295204 + FLAM_A SINE Alu 25 134 -8 2243 93 10 0 chr5 68790804 68791104 -134294428 - AluY SINE Alu -8 303 1 1959 118 25 0 chr5 68791306 68791585 -134293947 + AluSx SINE Alu 1 286 -26 294 106 0 0 chr5 68791600 68791647 -134293885 + (TA)n Simple_repeat Simple_repeat 2 48 0 1860 140 2 79 chr5 68792173 68792566 -134292966 + MER47A DNA MER2_type 4 366 0 244 270 66 51 chr5 68792873 68793010 -134292522 - L1ME3A LINE L1 -6 6164 6026 939 223 99 44 chr5 68793052 68793399 -134292133 - L1ME3A LINE L1 -554 5608 5281 2095 122 7 3 chr5 68793399 68793694 -134291838 + AluSx SINE Alu 1 296 -16 939 223 99 44 chr5 68793694 68793824 -134291708 - L1ME3A LINE L1 -881 5281 5160 1776 157 10 20 chr5 68793824 68794118 -134291414 - AluJo SINE Alu -21 291 1 939 223 99 44 chr5 68794118 68794255 -134291277 - L1ME3A LINE L1 -1002 5160 4960 1904 141 30 3 chr5 68794293 68794590 -134290942 - AluJb SINE Alu -7 305 1 947 129 0 0 chr5 68794593 68794725 -134290807 - AluJb SINE Alu -180 132 1 552 184 0 0 chr5 68794794 68794892 -134290640 - Tigger7 DNA MER2_type 0 2487 2390 868 247 117 4 chr5 68794895 68795134 -134290398 - Tigger7 DNA MER2_type -2220 267 2 1852 164 0 26 chr5 68795259 68795569 -134289963 - AluJo SINE Alu -10 302 1 194 0 39 0 chr5 68795660 68795686 -134289846 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 815 179 6 26 chr5 68795762 68795918 -134289614 - FRAM SINE Alu -30 146 1 206 277 31 31 chr5 68796067 68796132 -134289400 + MIR3 SINE MIR 137 201 -7 1020 207 18 31 chr5 68796990 68797217 -134288315 + Tigger3(Golem) DNA MER2_type 2 225 -2804 448 232 0 0 chr5 68797216 68797298 -134288234 + Tigger3(Golem) DNA MER2_type 2944 3025 -4 * 1006 186 180 30 chr5 68797884 68798245 -134287287 - Charlie1 DNA MER1_type -4 2757 2343 274 203 58 29 chr5 68798243 68798312 -134287220 - Charlie1 DNA MER1_type -2690 71 1 * 2179 101 44 3 chr5 68798686 68798984 -134286548 + AluSg SINE Alu 1 310 0 249 33 0 0 chr5 68799372 68799402 -134286130 + (TG)n Simple_repeat Simple_repeat 2 31 0 258 32 0 0 chr5 68799435 68799466 -134286066 + (TG)n Simple_repeat Simple_repeat 1 31 0 1246 185 0 0 chr5 68799472 68799672 -134285860 - AluJo SINE Alu -26 286 87 194 316 118 26 chr5 68800394 68800470 -134285062 - MER5A DNA MER1_type -57 132 50 * 269 323 11 21 chr5 68800405 68800498 -134285034 + MER5A DNA MER1_type 87 178 -11 2335 86 7 10 chr5 68800558 68800862 -134284670 + AluY SINE Alu 1 303 -8 2028 95 14 11 chr5 68801958 68802241 -134283291 + AluSx SINE Alu 14 297 -15 1576 182 0 0 chr5 68802488 68802730 -134282802 - AluSx SINE Alu -70 242 1 1636 138 97 0 chr5 68802739 68803008 -134282524 - AluSx SINE Alu -17 295 1 635 202 0 0 chr5 68803212 68803326 -134282206 - FRAM SINE Alu -62 114 1 2059 82 45 0 chr5 68803517 68803785 -134281747 + AluSg SINE Alu 1 280 -30 1417 202 55 0 chr5 68803912 68804184 -134281348 + AluJo SINE Alu 1 287 -25 2621 36 3 0 chr5 68804572 68804877 -134280655 + AluY SINE Alu 1 306 -5 1832 167 28 0 chr5 68805010 68805298 -134280234 - AluSx SINE Alu -16 296 1 225 0 0 0 chr5 68806087 68806112 -134279420 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2140 110 3 3 chr5 68806255 68806546 -134278986 - AluSg SINE Alu -19 291 1 594 277 151 48 chr5 68806618 68807094 -134278438 - L1MC5 LINE L1 -34 7927 7403 1471 163 101 101 chr5 68807761 68808226 -134277306 - MER31B LTR ERV1 0 466 2 1000 205 58 5 chr5 68808474 68808698 -134276834 - MER46A DNA MER2_type 0 236 1 972 162 32 0 chr5 68809240 68809394 -134276138 - FRAM SINE Alu -17 159 1 212 220 20 0 chr5 68809688 68809738 -134275794 + (TA)n Simple_repeat Simple_repeat 1 51 0 1568 195 14 20 chr5 68809752 68810044 -134275488 - AluJo SINE Alu -20 292 3 2024 125 10 39 chr5 68810082 68810387 -134275145 + AluJb SINE Alu 1 296 -16 2186 114 0 3 chr5 68810526 68810824 -134274708 - AluSx SINE Alu -15 297 1 2226 95 30 0 chr5 68810844 68811139 -134274393 - AluSc SINE Alu -5 304 1 1570 166 26 35 chr5 68811160 68811473 -134274059 - AluJb SINE Alu -2 310 1 2661 214 13 16 chr5 68812414 68812962 -134272570 - REP3 LTR ERV -8 554 9 275 267 25 43 chr5 68813524 68813685 -134271847 - MER112 DNA MER1_type -95 165 8 1268 218 118 11 chr5 68814632 68814912 -134270620 - AluSx SINE Alu -2 310 1 315 300 0 50 chr5 68815779 68815879 -134269653 - L2 LINE L2 -223 3049 2955 431 270 148 16 chr5 68816238 68816444 -134269088 - MIR SINE MIR -25 237 5 211 295 175 55 chr5 68816426 68816626 -134268906 - L3 LINE CR1 -427 1150 927 * 219 270 16 32 chr5 68816740 68816803 -134268729 + MIR SINE MIR 18 79 -129 22 0 0 0 chr5 68817422 68817444 -134268088 + AT_rich Low_complexity Low_complexity 1 22 0 2104 134 13 0 chr5 68817511 68817816 -134267716 - AluSx SINE Alu -3 309 1 23 0 0 0 chr5 68817828 68817851 -134267681 + AT_rich Low_complexity Low_complexity 1 23 0 345 295 88 40 chr5 68818172 68818423 -134267109 - L1ME4a LINE L1 -71 6050 5788 296 235 47 0 chr5 68818584 68818669 -134266863 - L1ME4a LINE L1 -461 5660 5572 431 266 65 16 chr5 68818770 68818894 -134266638 + L2 LINE L2 3184 3313 0 2290 90 7 3 chr5 68819222 68819521 -134266011 - AluSx SINE Alu -12 300 1 2197 192 97 48 chr5 68819669 68820404 -134265128 + Looper DNA T2_type 190 960 -598 485 210 42 12 chr5 68820409 68820576 -134264956 + Looper DNA T2_type 1386 1557 -1 496 258 97 21 chr5 68820637 68820823 -134264709 - L2 LINE L2 -19 3294 3095 430 178 89 0 chr5 68821422 68821512 -134264020 - Tigger7 DNA MER2_type 0 2491 2394 * 1290 189 31 4 chr5 68821511 68821771 -134263761 - Tigger7 DNA MER2_type -2220 267 1 596 191 43 0 chr5 68821784 68821899 -134263633 - FLAM_C SINE Alu -23 120 1 1774 148 46 11 chr5 68821930 68822214 -134263318 + AluJb SINE Alu 1 294 -18 195 270 111 0 chr5 68822709 68822772 -134262760 - L2 LINE L2 -15 3257 3188 426 228 100 106 chr5 68824688 68824870 -134260662 - L1MC5 LINE L1 -104 7857 7675 1903 152 0 3 chr5 68824870 68825159 -134260373 - AluJb SINE Alu -24 288 1 426 228 100 106 chr5 68825159 68825530 -134260002 - L1MC5 LINE L1 -286 7675 7297 18139 61 4 19 chr5 68825627 68827599 -134257933 - L1PA6 LINE L1 0 6154 4238 2578 61 0 10 chr5 68827599 68827910 -134257622 - AluY SINE Alu -3 308 1 18139 61 4 19 chr5 68827910 68829199 -134256333 - L1PA6 LINE L1 -1916 4238 2932 774 235 4 22 chr5 68829250 68829480 -134256052 - L1MC5 LINE L1 -722 7239 7014 26 0 0 0 chr5 68829761 68829787 -134255745 + AT_rich Low_complexity Low_complexity 1 26 0 225 333 17 0 chr5 68831400 68831460 -134254072 - MER91A DNA MER1_type -102 94 34 1706 177 3 39 chr5 68832251 68832562 -134252970 + AluJo SINE Alu 2 301 -11 2386 78 3 0 chr5 68832664 68832972 -134252560 - AluY SINE Alu -2 309 1 30 0 0 0 chr5 68833649 68833679 -134251853 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr5 68833704 68833739 -134251793 + AT_rich Low_complexity Low_complexity 1 35 0 359 188 0 0 chr5 68833739 68833824 -134251708 - L1MA4A LINE L1 -5 6298 6214 1000 94 0 0 chr5 68833973 68834100 -134251432 + AluSc SINE Alu 166 292 -17 269 325 36 0 chr5 68835020 68835103 -134250429 + L2 LINE L2 3137 3222 -50 187 303 101 30 chr5 68835141 68835240 -134250292 - L2 LINE L2 -814 2500 2395 1788 169 0 17 chr5 68835414 68835709 -134249823 + AluJb SINE Alu 1 290 -22 24 0 0 0 chr5 68835922 68835946 -134249586 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 68835973 68835994 -134249538 + AT_rich Low_complexity Low_complexity 1 21 0 207 342 125 70 chr5 68836071 68836512 -134249020 - L2 LINE L2 0 3272 2808 23 0 0 0 chr5 68836919 68836942 -134248590 + AT_rich Low_complexity Low_complexity 1 23 0 1049 145 13 0 chr5 68837461 68837613 -134247919 - AluSg/x SINE Alu -22 290 137 232 316 13 0 chr5 68837799 68837878 -134247654 + L2 LINE L2 3234 3313 0 190 353 143 0 chr5 68837982 68838101 -134247431 - L2 LINE L2 0 3272 3137 751 168 165 28 chr5 68838169 68838360 -134247172 + MER33 DNA MER1_type 1 245 -2340 2119 60 0 19 chr5 68838360 68838627 -134246905 - AluY SINE Alu -13 298 37 751 168 165 28 chr5 68838627 68838720 -134246812 + MER33 DNA MER1_type 245 324 0 265 210 284 0 chr5 68838728 68838809 -134246723 - MER5A DNA MER1_type 0 189 86 1595 182 29 4 chr5 68839250 68839530 -134246002 - AluSx SINE Alu -25 287 1 1809 167 7 7 chr5 68840266 68840559 -134244973 - AluSx SINE Alu -16 296 4 1586 214 13 0 chr5 68842160 68842464 -134243068 - AluJb SINE Alu -4 308 1 2312 97 7 0 chr5 68842707 68843005 -134242527 + AluSg SINE Alu 7 306 -4 353 303 15 8 chr5 68843337 68843469 -134242063 + (TA)n Simple_repeat Simple_repeat 1 133 0 1530 208 3 3 chr5 68844170 68844459 -134241073 - AluJo SINE Alu -21 291 3 180 0 0 0 chr5 68844719 68844739 -134240793 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1896 137 68 0 chr5 68845300 68845578 -134239954 + AluSx SINE Alu 1 297 -15 2290 150 100 7 chr5 68845803 68846263 -134239269 - Tigger3b DNA MER2_type -1 1230 728 835 50 0 0 chr5 68846263 68846364 -134239168 - AluY SINE Alu -5 306 206 3280 145 39 68 chr5 68846364 68846697 -134238835 - Tigger3b DNA MER2_type -2297 731 390 1965 159 17 3 chr5 68846697 68846999 -134238533 + AluJb SINE Alu 1 306 -6 3280 145 39 68 chr5 68846999 68847210 -134238322 - Tigger3b DNA MER2_type -2638 390 213 1638 191 3 3 chr5 68847210 68847492 -134238040 - AluJo SINE Alu -30 282 1 3280 145 39 68 chr5 68847492 68847699 -134237833 - Tigger3b DNA MER2_type -2815 213 1 26 0 0 0 chr5 68848227 68848253 -134237279 + AT_rich Low_complexity Low_complexity 1 26 0 2078 142 6 6 chr5 68849478 68849819 -134235713 - AluSx SINE Alu 0 341 1 37 99 0 0 chr5 68850001 68850122 -134235410 + AT_rich Low_complexity Low_complexity 1 121 0 226 274 168 9 chr5 68850154 68850267 -134235265 + L2 LINE L2 3173 3303 -10 21 57 0 0 chr5 68851444 68851479 -134234053 + AT_rich Low_complexity Low_complexity 1 35 0 320 311 18 90 chr5 68851927 68852094 -134233438 + L2 LINE L2 3109 3263 -9 264 260 34 82 chr5 68853755 68853901 -134231631 - MIR SINE MIR -3 259 121 1536 146 13 79 chr5 68855069 68855385 -134230147 - AluSx SINE Alu -17 295 1 347 174 20 20 chr5 68855456 68855554 -134229978 + CT-rich Low_complexity Low_complexity 4 101 0 1801 55 0 23 chr5 68855578 68855834 -134229698 - L1PA6 LINE L1 -42 6112 5863 898 35 0 0 chr5 68855834 68855948 -134229584 + L1PA6 LINE L1 5754 5867 -287 309 309 99 11 chr5 68856157 68856348 -134229184 + Tigger8 DNA MER2_type 433 640 -26 1313 173 12 0 chr5 68856432 68856675 -134228857 - L1MB1 LINE L1 -9 6159 5914 2131 154 0 20 chr5 68856683 68857086 -134228446 - L1MB1 LINE L1 -366 5802 5408 501 268 46 43 chr5 68857224 68857552 -134227980 - L1MC4 LINE L1 -8 8034 7706 2086 127 10 3 chr5 68857670 68857970 -134227562 - AluSx SINE Alu -10 302 1 27 29 0 0 chr5 68858686 68858720 -134226812 + AT_rich Low_complexity Low_complexity 1 34 0 5647 40 31 1 chr5 68859544 68860198 -134225334 - SVA Other Other -4 1382 710 1550 173 0 0 chr5 68860301 68860532 -134225000 - AluSx SINE Alu -81 231 1 1663 134 97 0 chr5 68860541 68860810 -134224722 - AluSx SINE Alu -17 295 1 635 202 0 0 chr5 68861014 68861128 -134224404 - FRAM SINE Alu -62 114 1 2059 82 45 0 chr5 68861319 68861587 -134223945 + AluSg SINE Alu 1 280 -30 1401 198 55 4 chr5 68861714 68861987 -134223545 + AluJo SINE Alu 1 287 -25 2502 32 3 25 chr5 68862375 68862690 -134222842 + AluY SINE Alu 1 308 -3 346 118 49 0 chr5 68863077 68863179 -134222353 + (TG)n Simple_repeat Simple_repeat 1 107 0 1216 190 0 0 chr5 68863185 68863385 -134222147 - AluJo SINE Alu -26 286 87 194 316 118 26 chr5 68864107 68864183 -134221349 - MER5A DNA MER1_type -57 132 50 * 255 333 11 21 chr5 68864118 68864211 -134221321 + MER5A DNA MER1_type 87 178 -11 2335 86 7 10 chr5 68864271 68864575 -134220957 + AluY SINE Alu 1 303 -8 2028 95 14 11 chr5 68865671 68865954 -134219578 + AluSx SINE Alu 14 297 -15 23 33 0 0 chr5 68866279 68866309 -134219223 + AT_rich Low_complexity Low_complexity 1 30 0 2219 119 0 0 chr5 68866681 68866984 -134218548 - AluSq SINE Alu -10 303 1 8234 68 4 38 chr5 68866984 68868291 -134217241 - L1P LINE L1 -1952 4194 2932 710 217 14 28 chr5 68868360 68868577 -134216955 - L1MC5 LINE L1 -734 7227 7014 26 0 0 0 chr5 68868857 68868883 -134216649 + AT_rich Low_complexity Low_complexity 1 26 0 1809 149 7 4 chr5 68870299 68870574 -134214958 - AluJo SINE Alu -36 276 1 22 56 0 0 chr5 68870906 68870942 -134214590 + AT_rich Low_complexity Low_complexity 1 36 0 1298 133 14 43 chr5 68870948 68871158 -134214374 + AluJo SINE Alu 85 288 -24 544 124 0 0 chr5 68871219 68871308 -134214224 - Tigger4(Zombi) DNA MER2_type 0 2731 2643 2038 133 24 0 chr5 68871346 68871639 -134213893 - AluSq SINE Alu -13 300 1 788 151 8 0 chr5 68871948 68872074 -134213458 + FLAM_C SINE Alu 1 127 -6 2390 146 22 35 chr5 68872080 68872533 -134212999 - MER44D DNA MER2_type -236 469 23 5468 89 40 52 chr5 68873082 68874258 -134211274 - SVA Other Other -520 866 2 24 0 0 0 chr5 68874795 68874819 -134210713 + AT_rich Low_complexity Low_complexity 1 24 0 2372 105 0 0 chr5 68875908 68876212 -134209320 - AluSx SINE Alu -8 304 1 750 155 44 44 chr5 68876317 68876498 -134209034 - L1MB3 LINE L1 0 6183 6003 2534 63 0 0 chr5 68876535 68876834 -134208698 + AluY SINE Alu 1 299 -12 2352 89 0 0 chr5 68877019 68877321 -134208211 - AluSp SINE Alu -11 302 1 1906 132 3 63 chr5 68877640 68877782 -134207750 + AluSx SINE Alu 1 150 -162 2283 92 0 3 chr5 68877782 68878074 -134207458 + AluSc SINE Alu 1 291 -18 1906 132 3 63 chr5 68878074 68878249 -134207283 + AluSx SINE Alu 150 299 -13 297 250 14 0 chr5 68878449 68878521 -134207011 - L2 LINE L2 0 3272 3200 310 282 126 31 chr5 68878910 68879165 -134206367 - HAL1 LINE L1 -47 2460 2182 2339 233 20 39 chr5 68879284 68879893 -134205639 - MLT1E3 LTR MaLR -27 597 1 5381 60 32 0 chr5 68879993 68880681 -134204851 - L1PA5 LINE L1 0 6154 5445 1940 267 76 37 chr5 68880702 68881717 -134203815 - HAL1 LINE L1 -629 1878 825 408 229 29 137 chr5 68881816 68881906 -134203626 - HAL1 LINE L1 -1667 840 777 2183 122 0 0 chr5 68881906 68882202 -134203330 - AluSx SINE Alu -16 296 1 408 229 29 137 chr5 68882202 68882286 -134203246 - HAL1 LINE L1 -1730 777 685 345 333 59 18 chr5 68882327 68882549 -134202983 - HAL1 LINE L1 -1961 546 316 634 259 69 35 chr5 68882609 68882898 -134202634 - HAL1 LINE L1 -2189 318 20 420 229 76 15 chr5 68883521 68883652 -134201880 - L1MD2 LINE L1 0 6359 6221 310 217 90 0 chr5 68883893 68883971 -134201561 + L1MD2 LINE L1 6224 7946 -49 366 190 21 13 chr5 68884271 68884371 -134201161 + L1MA9 LINE L1 6017 6123 -168 1478 211 0 14 chr5 68885017 68885301 -134200231 - AluJo SINE Alu -32 280 1 942 252 32 5 chr5 68886880 68887098 -134198434 - MER58A DNA MER1_type 0 224 1 418 307 62 22 chr5 68887472 68887651 -134197881 + MIR SINE MIR 32 217 -45 * 1054 286 214 41 chr5 68887622 68888540 -134196992 - L2 LINE L2 -1066 2248 1173 526 238 79 28 chr5 68888544 68888796 -134196736 - L1M4 LINE L1 -2880 3266 3002 1220 198 4 36 chr5 68889848 68890095 -134195437 + MER8 DNA MER2_type 1 239 0 1417 150 33 0 chr5 68890500 68890740 -134194792 - L1PA16 LINE L1 -10 6156 5909 859 199 31 0 chr5 68890795 68890956 -134194576 - AluJo/FRAM SINE Alu -12 300 135 1734 133 34 0 chr5 68890956 68891220 -134194312 - AluSq SINE Alu -15 298 26 2087 117 0 0 chr5 68891964 68892275 -134193257 - AluSx SINE Alu 0 311 1 227 200 0 0 chr5 68892348 68892383 -134193149 + MIR SINE MIR 207 241 -21 22 80 0 0 chr5 68892537 68892587 -134192945 + AT_rich Low_complexity Low_complexity 1 50 0 2270 113 3 3 chr5 68892819 68893130 -134192402 - AluSp SINE Alu -2 311 1 22 0 0 0 chr5 68893149 68893171 -134192361 + AT_rich Low_complexity Low_complexity 1 22 0 1143 204 126 11 chr5 68893320 68893590 -134191942 + AluJo SINE Alu 1 301 -1 881 198 125 0 chr5 68894257 68894449 -134191083 - MER20 DNA MER1_type 0 219 4 261 0 0 0 chr5 68894636 68894665 -134190867 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 366 23 0 0 chr5 68896025 68896068 -134189464 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 400 208 0 0 chr5 68896068 68896145 -134189387 - FRAM SINE Alu -20 146 70 26 50 0 0 chr5 68896412 68896452 -134189080 + AT_rich Low_complexity Low_complexity 1 40 0 22 70 0 0 chr5 68896911 68896954 -134188578 + AT_rich Low_complexity Low_complexity 1 43 0 233 286 0 0 chr5 68897131 68897194 -134188338 - MER5A DNA MER1_type -118 71 9 266 233 35 9 chr5 68897389 68897505 -134188027 + (TA)n Simple_repeat Simple_repeat 2 120 0 706 74 0 0 chr5 68897546 68897641 -134187891 + L1PA6 LINE L1 6055 6149 -5 1543 170 31 52 chr5 68897943 68898326 -134187206 + THE1C LTR MaLR 1 375 0 719 174 17 0 chr5 68898332 68898447 -134187085 + Tigger3(Golem) DNA MER2_type 2912 3028 -1 1135 239 41 33 chr5 68898702 68899070 -134186462 - MLT1C LTR MaLR 0 467 97 207 250 36 18 chr5 68899872 68899928 -134185604 + MIR3 SINE MIR 112 168 -40 825 262 53 0 chr5 68900187 68900412 -134185120 + MIR SINE MIR 3 239 -23 2358 84 3 0 chr5 68900701 68900999 -134184533 + AluSp SINE Alu 2 300 -13 2015 157 0 3 chr5 68901010 68901310 -134184222 + AluJb SINE Alu 3 301 -11 343 319 8 34 chr5 68901542 68901661 -134183871 + AluJb SINE Alu 2 117 -185 697 82 0 0 chr5 68901673 68901771 -134183761 - AluSp/q SINE Alu 0 313 216 21 36 0 0 chr5 68902136 68902164 -134183368 + AT_rich Low_complexity Low_complexity 1 28 0 590 286 86 16 chr5 68902548 68902793 -134182739 - MIR SINE MIR 0 262 1 6268 50 0 5 chr5 68902855 68903669 -134181863 - L1PA5 LINE L1 -2554 3592 2783 14323 44 6 0 chr5 68903670 68906217 -134179315 + L1PA5 LINE L1 3596 6151 -3 485 273 35 48 chr5 68907455 68907686 -134177846 - HAL1 LINE L1 -4 2503 2276 681 239 151 4 chr5 68907726 68907965 -134177567 - HAL1 LINE L1 -344 2163 1890 * 791 277 84 61 chr5 68907962 68908567 -134176965 - HAL1 LINE L1 -1010 1497 23 264 356 34 13 chr5 68908925 68909074 -134176458 + MER20 DNA MER1_type 3 154 -65 557 265 36 18 chr5 68909141 68909307 -134176225 + L2 LINE L2 352 520 -2794 681 77 11 0 chr5 68910490 68910581 -134174951 + AluSg/x SINE Alu 203 294 -15 207 167 21 21 chr5 68910628 68910676 -134174856 + (TA)n Simple_repeat Simple_repeat 1 48 0 2417 73 3 0 chr5 68911454 68911754 -134173778 + AluY SINE Alu 1 301 -10 714 152 0 32 chr5 68912076 68912201 -134173331 - FLAM_C SINE Alu -1 142 22 5543 162 29 41 chr5 68912433 68912928 -134172604 - L1MA5A LINE L1 -3 6294 5795 390 21 0 0 chr5 68912928 68912975 -134172557 + (TG)n Simple_repeat Simple_repeat 1 47 0 5543 162 29 41 chr5 68912975 68913363 -134172169 - L1MA5A LINE L1 -502 5795 5404 1915 116 79 0 chr5 68913363 68913640 -134171892 - AluSx SINE Alu -12 300 2 5543 162 29 41 chr5 68913640 68914344 -134171188 - L1MA5A LINE L1 -893 5404 4738 1924 146 4 0 chr5 68914344 68914625 -134170907 - AluSx SINE Alu -30 282 1 5543 162 29 41 chr5 68914625 68914904 -134170628 - L1MA5A LINE L1 -1559 4738 4457 1360 203 10 57 chr5 68914943 68915090 -134170442 - AluJo SINE Alu -30 282 130 378 0 0 0 chr5 68915090 68915132 -134170400 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2152 100 0 0 chr5 68915132 68915413 -134170119 - AluY SINE Alu -30 281 1 1360 203 10 57 chr5 68915413 68915560 -134169972 - AluJo SINE Alu -180 132 1 1037 144 0 0 chr5 68915791 68915966 -134169566 + AluSg/x SINE Alu 137 311 0 445 203 23 8 chr5 68916066 68916289 -134169243 + AluJo SINE Alu 1 291 -21 23 78 0 0 chr5 68916290 68916341 -134169191 + AT_rich Low_complexity Low_complexity 1 51 0 2394 76 3 0 chr5 68916801 68917092 -134168440 - AluSp SINE Alu -20 293 2 31 26 0 0 chr5 68918367 68918405 -134167127 + AT_rich Low_complexity Low_complexity 1 38 0 2006 157 32 13 chr5 68918467 68918842 -134166690 - Tigger1 DNA MER2_type -15 2403 2022 264 105 0 0 chr5 68918839 68918877 -134166655 + Tigger1 DNA MER2_type 1942 1979 -439 * 1116 110 25 123 chr5 68919014 68919250 -134166282 - Tigger1 DNA MER2_type -412 2006 1794 2368 104 3 0 chr5 68919250 68919558 -134165974 + AluSq SINE Alu 1 309 -4 656 248 64 54 chr5 68919591 68919889 -134165643 - LTR47B LTR ERVL -142 301 1 1790 180 34 0 chr5 68919895 68920218 -134165314 - MLT2C1 LTR ERVL -63 334 1 2181 150 0 15 chr5 68921947 68922288 -134163244 - MER1B DNA MER1_type 0 337 2 528 295 64 39 chr5 68922451 68922685 -134162847 - MIR SINE MIR -21 241 2 1399 144 204 3 chr5 68923151 68923450 -134162082 - MER46B DNA MER2_type -1 235 2 873 172 15 78 chr5 68924178 68924382 -134161150 - MER20 DNA MER1_type -25 194 4 671 260 66 11 chr5 68924458 68924639 -134160893 + MIR SINE MIR 17 207 -55 2046 123 3 7 chr5 68924818 68925125 -134160407 + AluSx SINE Alu 1 306 0 340 235 121 34 chr5 68925126 68925275 -134160257 - L1M1 LINE L1 -4239 3326 3165 * 5101 103 5 6 chr5 68925268 68926046 -134159486 - L1PA8 LINE L1 0 6172 5353 1938 158 0 16 chr5 68926066 68926369 -134159163 + AluSx SINE Alu 1 298 -14 680 195 0 8 chr5 68926484 68926607 -134158925 - FLAM_A SINE Alu -11 122 1 2767 190 78 29 chr5 68926607 68927088 -134158444 - L1M1 LINE L1 -4486 3079 2623 246 81 0 0 chr5 68927088 68927125 -134158407 + (TTA)n Simple_repeat Simple_repeat 2 38 0 2767 190 78 29 chr5 68927125 68927169 -134158363 - L1M1 LINE L1 -4942 2623 2583 2289 104 3 0 chr5 68927169 68927477 -134158055 - AluSp SINE Alu -4 309 1 2767 190 78 29 chr5 68927477 68927558 -134157974 - L1M1 LINE L1 -4982 2583 2507 1926 159 7 0 chr5 68927558 68927577 -134157955 - AluJb SINE Alu -12 300 283 216 0 0 0 chr5 68927577 68927601 -134157931 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1926 159 7 0 chr5 68927601 68927877 -134157655 - AluJb SINE Alu -29 283 3 2767 190 78 29 chr5 68927877 68928020 -134157512 - L1M1 LINE L1 -5058 2507 2291 1371 106 0 5 chr5 68928025 68928213 -134157319 + AluSg/x SINE Alu 118 304 -6 1660 244 92 19 chr5 68928213 68928725 -134156807 - L1M1 LINE L1 -5283 2282 1734 1080 221 3 83 chr5 68928784 68929096 -134156436 - L1M1 LINE L1 -6737 752 466 231 36 0 0 chr5 68930772 68930800 -134154732 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 383 330 97 19 chr5 68930879 68931085 -134154447 + MIR SINE MIR 35 256 -6 250 324 119 38 chr5 68931194 68931304 -134154228 - MIR SINE MIR 0 262 162 2254 91 7 0 chr5 68931304 68931601 -134153931 - AluSx SINE Alu -13 299 1 250 324 119 38 chr5 68931601 68931700 -134153832 - MIR SINE MIR -100 162 36 435 38 0 0 chr5 68932151 68932204 -134153328 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1686 171 0 7 chr5 68932211 68932498 -134153034 - AluJb SINE Alu -27 285 1 823 99 221 0 chr5 68932672 68932803 -134152729 - AluY SINE Alu -22 289 130 516 248 28 14 chr5 68932814 68932959 -134152573 + MIR SINE MIR 103 249 -13 385 337 57 42 chr5 68933494 68933687 -134151845 - L3 LINE CR1 -16 1561 1366 542 226 63 57 chr5 68934800 68935149 -134150383 - L1MC4 LINE L1 0 8042 7518 574 219 118 29 chr5 68935209 68935438 -134150094 - L1MC4 LINE L1 -353 7535 7217 1559 199 29 0 chr5 68936124 68936405 -134149127 + AluJb SINE Alu 1 289 -23 446 267 248 5 chr5 68941119 68941329 -134144203 - MIR SINE MIR 0 262 2 781 315 174 24 chr5 68941354 68942154 -134143378 - L2 LINE L2 -76 3196 2255 24 77 0 0 chr5 68943708 68943760 -134141772 + AT_rich Low_complexity Low_complexity 1 52 0 1819 151 0 49 chr5 68943930 68944254 -134141278 + AluJb SINE Alu 1 308 -4 216 86 0 0 chr5 68944342 68944377 -134141155 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 677 347 47 47 chr5 68945102 68945595 -134139937 - L2 LINE L2 -446 2868 2376 1738 109 4 0 chr5 68946144 68946382 -134139150 + AluSp SINE Alu 60 298 -15 324 0 0 0 chr5 68946382 68946418 -134139114 + (TA)n Simple_repeat Simple_repeat 2 37 0 515 185 79 34 chr5 68947102 68947280 -134138252 + Charlie1 DNA MER1_type 2569 2754 -7 462 248 9 9 chr5 68947390 68947503 -134138029 - MIR SINE MIR -100 162 50 672 163 33 77 chr5 68999291 68999436 -134086096 - L1MC/D LINE L1 -743 5403 5329 933 195 6 0 chr5 68999436 68999600 -134085932 - FAM SINE Alu -8 167 3 672 163 33 77 chr5 68999600 68999769 -134085763 - L1MC/D LINE L1 -817 5329 5154 2253 111 0 0 chr5 69000358 69000655 -134084877 - AluSp SINE Alu -16 297 1 2639 102 5 3 chr5 69001073 69001447 -134084085 - THE1C LTR MaLR 0 375 1 209 372 0 0 chr5 69001785 69001871 -134083661 - MIR3 SINE MIR -15 193 108 863 148 0 8 chr5 69001872 69002000 -134083532 + AluSq/x SINE Alu 1 127 -185 1455 216 30 71 chr5 69002452 69002984 -134082548 - MLT2B1 LTR ERVL -10 510 1 273 298 48 8 chr5 69003223 69003347 -134082185 - L2 LINE L2 -528 2786 2658 398 241 96 42 chr5 69003358 69003524 -134082008 + MER5A DNA MER1_type 15 189 0 1788 148 13 45 chr5 69004280 69004590 -134080942 + AluJb SINE Alu 1 300 -12 273 257 64 18 chr5 69004714 69004823 -134080709 - L2 LINE L2 -543 2771 2658 1990 191 13 0 chr5 69005631 69006018 -134079514 - MER57A LTR ERV1 -11 392 1 23 0 0 0 chr5 69006081 69006104 -134079428 + AT_rich Low_complexity Low_complexity 1 23 0 445 288 58 58 chr5 69006348 69006605 -134078927 - MLT1L LTR MaLR -313 302 46 186 43 0 0 chr5 69006677 69006700 -134078832 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 1034 100 0 22 chr5 69006700 69006880 -134078652 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 2059 129 0 0 chr5 69006881 69007160 -134078372 - AluSx SINE Alu -33 279 1 704 188 42 14 chr5 69007379 69007523 -134078009 + MER5A DNA MER1_type 42 189 0 1825 149 0 24 chr5 69008372 69008661 -134076871 - AluSx SINE Alu -30 282 1 24 53 0 0 chr5 69010040 69010078 -134075454 + AT_rich Low_complexity Low_complexity 1 38 0 203 213 21 0 chr5 69010230 69010277 -134075255 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 223 258 61 0 chr5 69010801 69010867 -134074665 + MIR SINE MIR 100 169 -93 402 220 91 38 chr5 69011135 69011267 -134074265 + MIR3 SINE MIR 45 183 -25 4245 147 75 5 chr5 69011333 69012110 -134073422 - MER6 DNA MER2_type -1 864 34 1968 137 26 15 chr5 69012129 69012472 -134073060 + MER7A DNA MER2_type 1 345 -1 215 30 0 30 chr5 69012509 69012542 -134072990 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1957 135 0 7 chr5 69012544 69012825 -134072707 - AluSx SINE Alu -33 279 1 257 0 30 0 chr5 69014028 69014061 -134071471 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1465 202 29 4 chr5 69014064 69014341 -134071191 - AluJo SINE Alu -24 288 5 587 191 0 0 chr5 69014368 69014483 -134071049 - L1MA8 LINE L1 -1 6290 6176 2009 149 7 7 chr5 69014513 69014821 -134070711 + AluJb SINE Alu 1 308 -4 1350 92 0 6 chr5 69014869 69015043 -134070489 + AluY SINE Alu 1 173 -138 2019 88 9 82 chr5 69016187 69016506 -134069026 - AluSx SINE Alu -16 296 1 312 259 36 71 chr5 69016710 69016822 -134068710 - MER5B DNA MER1_type -69 109 2 1647 182 48 3 chr5 69017047 69017398 -134068134 - L1MC1 LINE L1 -70 6263 5897 1001 273 98 44 chr5 69017416 69017826 -134067706 + MLT2F LTR ERVL 171 602 -61 330 279 0 0 chr5 69017851 69017919 -134067613 + L2 LINE L2 3205 3272 0 294 188 47 47 chr5 69017914 69017999 -134067533 - L2 LINE L2 -55 3217 3133 * 2472 174 86 18 chr5 69020594 69021220 -134064312 + Charlie1 DNA MER1_type 2087 2755 -6 493 267 21 31 chr5 69021221 69021412 -134064120 - L1MC1 LINE L1 -2049 5759 5571 417 270 49 60 chr5 69021458 69021643 -134063889 - L1MC1 LINE L1 -2345 5463 5281 354 180 0 0 chr5 69021655 69021716 -134063816 + MLT1G1 LTR MaLR 3 63 -532 1173 185 5 5 chr5 69021880 69022085 -134063447 - AluJo SINE Alu -106 206 2 671 250 94 22 chr5 69022086 69022429 -134063103 + MLT1G1 LTR MaLR 33 450 -145 407 275 97 43 chr5 69022848 69022985 -134062547 + MER20 DNA MER1_type 2 155 -64 3529 158 118 32 chr5 69022985 69023745 -134061787 - LTR1B LTR ERV1 0 826 1 407 275 97 43 chr5 69023745 69023814 -134061718 + MER20 DNA MER1_type 155 219 0 230 179 0 0 chr5 69023904 69023943 -134061589 - L2 LINE L2 -6 3307 3269 305 160 0 93 chr5 69023983 69024058 -134061474 + MLT1D LTR MaLR 1 68 -437 1302 151 79 6 chr5 69024061 69024427 -134061105 - LTR54B LTR ERV1 0 498 73 224 278 14 0 chr5 69024521 69024593 -134060939 + GA-rich Low_complexity Low_complexity 1 73 0 22 70 0 0 chr5 69024863 69024906 -134060626 + AT_rich Low_complexity Low_complexity 1 43 0 1994 129 41 0 chr5 69024936 69025230 -134060302 + AluSg SINE Alu 1 306 -4 24 67 0 0 chr5 69026101 69026146 -134059386 + AT_rich Low_complexity Low_complexity 1 45 0 382 332 102 5 chr5 69026474 69026670 -134058862 + L1M4 LINE L1 2607 2821 -3325 456 68 0 0 chr5 69027238 69027297 -134058235 + AluYb8 SINE Alu 125 183 -135 1772 137 27 24 chr5 69027433 69027726 -134057806 + AluSx SINE Alu 1 294 -18 237 222 0 0 chr5 69027768 69027813 -134057719 + CT-rich Low_complexity Low_complexity 3 47 0 2320 73 0 20 chr5 69028057 69028359 -134057173 + AluY SINE Alu 1 296 -15 2426 130 54 29 chr5 69028530 69028723 -134056809 - MER4E LTR ERV1 0 779 592 2551 63 0 0 chr5 69028723 69029026 -134056506 + AluY SINE Alu 1 303 -8 2426 130 54 29 chr5 69029026 69029422 -134056110 - MER4E LTR ERV1 -187 592 1 269 233 17 17 chr5 69029503 69029563 -134055969 - MLT1J2 LTR MaLR -276 174 115 1731 141 120 43 chr5 69029735 69030103 -134055429 - MER61B LTR ERV1 -29 396 1 682 239 72 6 chr5 69030675 69030842 -134054690 + MER5B DNA MER1_type 1 178 0 3945 96 7 115 chr5 69031919 69032119 -134053413 - MER41B LTR ERV1 0 635 415 1722 116 110 38 chr5 69032119 69032411 -134053121 - AluSq SINE Alu 0 313 1 3945 96 7 115 chr5 69032411 69032518 -134053014 - MER41B LTR ERV1 -220 415 298 2409 102 3 0 chr5 69032518 69032822 -134052710 - AluSp SINE Alu -8 305 1 3945 96 7 115 chr5 69032822 69033191 -134052341 - MER41B LTR ERV1 -337 298 36 2377 67 13 3 chr5 69033191 69033489 -134052043 + AluY SINE Alu 1 301 -10 3945 96 7 115 chr5 69033489 69033522 -134052010 - MER41B LTR ERV1 -599 36 1 1175 166 14 93 chr5 69034380 69034506 -134051026 - L1MD3 LINE L1 0 7995 7903 2452 97 0 0 chr5 69034506 69034816 -134050716 - AluSg SINE Alu 0 310 1 1175 166 14 93 chr5 69034816 69034978 -134050554 - L1MD3 LINE L1 -92 7903 7730 184 369 138 15 chr5 69037986 69038116 -134047416 - L2 LINE L2 0 3272 3127 834 234 67 106 chr5 69038571 69038991 -134046541 - L1MC5 LINE L1 -40 8002 7646 1832 148 14 7 chr5 69038991 69039282 -134046250 - AluJb SINE Alu -19 293 1 834 234 67 106 chr5 69039282 69039513 -134046019 - L1MC5 LINE L1 -396 7646 7407 2250 95 3 3 chr5 69039561 69039857 -134045675 - AluSg SINE Alu -14 296 1 1135 146 0 0 chr5 69040121 69040286 -134045246 + AluSp SINE Alu 134 298 -15 2349 93 0 22 chr5 69041379 69041691 -134043841 - AluY SINE Alu -6 305 1 275 271 28 19 chr5 69042413 69042520 -134043012 - MIR3 SINE MIR -13 195 88 302 0 26 0 chr5 69042543 69042581 -134042951 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2057 115 11 0 chr5 69042583 69042861 -134042671 - AluSx SINE Alu -31 281 1 1773 143 11 21 chr5 69042868 69043179 -134042353 - AluSx SINE Alu 0 308 1 2594 62 0 0 chr5 69043192 69043499 -134042033 - AluY SINE Alu -3 308 2 1331 196 195 11 chr5 69043534 69044120 -134041412 - L1MCa LINE L1 -4199 2227 1446 2147 131 53 0 chr5 69044120 69044440 -134041092 + MER1B DNA MER1_type 1 337 -2 180 0 0 0 chr5 69044475 69044495 -134041037 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1775 218 162 104 chr5 69044499 69044709 -134040823 - L1MCa LINE L1 -5351 1075 879 2243 67 6 91 chr5 69044709 69045040 -134040492 - AluSq SINE Alu -10 303 1 1775 218 162 104 chr5 69045040 69045827 -134039705 - L1MCa LINE L1 -5547 879 20 631 256 172 57 chr5 69045998 69046486 -134039046 - L1ME4a LINE L1 -1 6120 5577 2294 81 0 39 chr5 69046539 69046849 -134038683 - AluY SINE Alu -13 298 1 1859 153 56 39 chr5 69047037 69047396 -134038136 + MLT1A1 LTR MaLR 1 365 0 277 250 54 43 chr5 69047426 69047518 -134038014 + MIR SINE MIR 97 189 -73 435 271 71 100 chr5 69047523 69047873 -134037659 - L2 LINE L2 0 3272 2933 191 283 113 65 chr5 69048211 69048458 -134037074 - L2 LINE L2 -2271 1043 785 236 167 0 0 chr5 69048556 69048598 -134036934 + L2 LINE L2 3213 3254 -18 2159 183 23 54 chr5 69048948 69049226 -134036306 - MLT1C LTR MaLR 0 467 209 2360 114 0 0 chr5 69049226 69049534 -134035998 - AluSx SINE Alu -4 308 1 2159 183 23 54 chr5 69049534 69049737 -134035795 - MLT1C LTR MaLR -258 209 1 246 229 164 120 chr5 69050387 69050460 -134035072 + MIR SINE MIR 17 85 -177 1905 209 72 27 chr5 69050460 69050943 -134034589 + MLT1D LTR MaLR 1 505 0 246 229 164 120 chr5 69050943 69051052 -134034480 + MIR SINE MIR 85 207 -55 344 241 136 56 chr5 69051192 69051354 -134034178 + MER5A DNA MER1_type 15 189 0 1341 248 79 22 chr5 69052486 69052930 -134032602 + MER70A LTR ERVL 4 472 0 2740 136 30 7 chr5 69053057 69053498 -134032034 + LTR32 LTR ERVL 21 471 0 1446 166 44 78 chr5 69053852 69054148 -134031384 - AluJo SINE Alu -26 286 1 2348 158 54 0 chr5 69054797 69055202 -134030330 - MSTA LTR MaLR 0 428 2 650 246 127 18 chr5 69056309 69056537 -134028995 - MIR SINE MIR -6 256 4 288 0 0 0 chr5 69057733 69057765 -134027767 + (CA)n Simple_repeat Simple_repeat 2 33 0 247 269 62 31 chr5 69057768 69057898 -134027634 - L2 LINE L2 -182 3131 2998 1644 184 5 70 chr5 69057944 69058329 -134027203 + MLT1A2 LTR MaLR 1 360 -14 236 270 36 58 chr5 69058582 69058719 -134026813 + MER94 DNA DNA 1 134 0 828 219 84 9 chr5 69059079 69059294 -134026238 + MIR SINE MIR 31 261 -1 1335 153 23 9 chr5 69059309 69059525 -134026007 - AluJb SINE Alu -18 294 76 883 286 174 15 chr5 69060108 69060499 -134025033 - MLT1K LTR MaLR -2 586 134 492 189 0 0 chr5 69060769 69060859 -134024673 - AluJo SINE Alu 0 312 223 210 262 0 0 chr5 69061508 69061550 -134023982 + T-rich Low_complexity Low_complexity 1 42 0 331 172 0 31 chr5 69061566 69061630 -134023902 - AluJo SINE Alu -20 282 221 236 255 206 20 chr5 69061610 69061712 -134023820 - MLT1K LTR MaLR -319 269 149 * 1440 171 4 12 chr5 69061718 69061958 -134023574 - AluJo SINE Alu -74 238 1 2207 117 3 3 chr5 69062689 69062998 -134022534 - AluSx SINE Alu -1 311 3 726 272 9 22 chr5 69063034 69063258 -134022274 + MIR SINE MIR 42 262 0 474 18 0 0 chr5 69063844 69063899 -134021633 + (TG)n Simple_repeat Simple_repeat 2 56 0 410 206 28 57 chr5 69063921 69064062 -134021470 - L1ME4a LINE L1 -1 6120 5984 40772 50 1 2 chr5 69064162 69069146 -134016386 + L1P LINE L1 1 4977 -1169 5038 142 43 5 chr5 69069247 69070043 -134015489 + LTR1B LTR ERV1 1 826 0 1902 89 19 70 chr5 69070220 69070535 -134014997 - AluSg1 SINE Alu -8 301 3 849 150 111 97 chr5 69070538 69070600 -134014932 - MER46B DNA MER2_type -2627 104 159 2258 112 0 3 chr5 69070600 69070896 -134014636 - AluSx SINE Alu -17 295 1 849 150 111 97 chr5 69070896 69071059 -134014473 - MER46B DNA MER2_type -2571 160 1 379 279 32 64 chr5 69071184 69071268 -134014264 + L1MEd LINE L1 620 705 -5414 1903 150 13 7 chr5 69071268 69071568 -134013964 + AluJb SINE Alu 1 302 -10 379 279 32 64 chr5 69071568 69071734 -134013798 + L1MEd LINE L1 705 862 -5257 1875 127 45 27 chr5 69071860 69072152 -134013380 - AluSx SINE Alu -15 297 1 1257 183 5 0 chr5 69072933 69073141 -134012391 - AluJb SINE Alu -94 218 10 2583 64 0 10 chr5 69073172 69073485 -134012047 + AluSg SINE Alu 1 310 0 1357 156 228 57 chr5 69073569 69073902 -134011630 - MLT1B LTR MaLR 0 390 1 247 171 66 40 chr5 69073907 69073983 -134011549 + L1ME4a LINE L1 6040 6117 -4 656 234 84 0 chr5 69074577 69074744 -134010788 + MIR SINE MIR 16 196 -66 353 312 55 12 chr5 69074954 69075120 -134010412 - MIR3 SINE MIR -11 197 19 1030 54 16 0 chr5 69075299 69075428 -134010104 - L1PA5 LINE L1 -260 5894 5764 1096 28 21 14 chr5 69075434 69075577 -134009955 + L1PA4 LINE L1 6012 6155 0 22 35 0 0 chr5 69075731 69075760 -134009772 + AT_rich Low_complexity Low_complexity 1 29 0 1235 14 0 7 chr5 69075845 69075988 -134009544 - L1PA2 LINE L1 -1 6154 6013 4537 12 6 4 chr5 69076088 69076607 -134008925 - L1PA2 LINE L1 -134 6021 5502 368 39 0 0 chr5 69076607 69076659 -134008873 + L1P LINE L1 5256 5307 -848 338 321 100 15 chr5 69076687 69077027 -134008505 - L1ME4a LINE L1 -225 5896 5491 44433 43 1 1 chr5 69079451 69085601 -133999931 - L1PA4 LINE L1 0 6155 4 278 300 196 33 chr5 69085692 69085962 -133999570 - MLT1I LTR MaLR 0 409 96 1718 160 32 4 chr5 69086051 69086332 -133999200 + AluJo SINE Alu 3 291 -21 2321 239 44 17 chr5 69086539 69087126 -133998406 - LTR26 LTR ERV1 0 603 1 724 219 291 31 chr5 69087200 69087551 -133997981 + MLT1H LTR MaLR 108 549 0 511 241 50 41 chr5 69088128 69088359 -133997173 - MLT1J2 LTR MaLR -240 210 8 1855 135 31 10 chr5 69089237 69089526 -133996006 + AluSq SINE Alu 3 297 -16 452 319 81 6 chr5 69089978 69090179 -133995353 - MIR SINE MIR -15 247 31 198 0 0 0 chr5 69090829 69090851 -133994681 + (GGA)n Simple_repeat Simple_repeat 2 23 0 208 228 11 10 chr5 69090975 69091059 -133994473 + L2 LINE L2 3137 3310 -3 239 239 15 176 chr5 69091215 69091349 -133994183 - MER5B DNA MER1_type -6 172 81 2207 112 3 0 chr5 69091349 69091643 -133993889 - AluSx SINE Alu -17 295 1 239 239 15 176 chr5 69091643 69091713 -133993819 - MER5B DNA MER1_type -97 81 1 1732 232 78 7 chr5 69092655 69093078 -133992454 - LTR40b LTR ERVL 0 462 10 630 260 150 27 chr5 69093204 69093504 -133992028 - MLT1H LTR MaLR 0 549 213 317 164 0 2 chr5 69093573 69093631 -133991901 - MLT2C1 LTR ERVL 0 663 464 205 200 50 0 chr5 69093640 69093700 -133991832 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 2140 113 3 20 chr5 69093700 69093992 -133991540 - AluSx SINE Alu -25 287 1 867 231 53 93 chr5 69094002 69094357 -133991175 - MLT2C1 LTR ERVL -56 341 1 261 213 0 53 chr5 69094785 69094860 -133990672 + (CATATA)n Simple_repeat Simple_repeat 5 75 0 1924 128 10 55 chr5 69095054 69095366 -133990166 - AluJo SINE Alu -12 300 3 2025 145 0 3 chr5 69095936 69096225 -133989307 + AluJb SINE Alu 20 307 -5 404 289 90 0 chr5 69096603 69096759 -133988773 + MER21B LTR ERV1 330 499 -364 4785 47 12 0 chr5 69097741 69098314 -133987218 - LTR10C LTR ERV1 -1 590 11 220 329 104 24 chr5 69098345 69098509 -133987023 - MIR3 SINE MIR 0 208 32 1544 149 117 14 chr5 69098542 69098824 -133986708 - AluJb SINE Alu -1 311 1 183 42 0 0 chr5 69098915 69098939 -133986593 + (CA)n Simple_repeat Simple_repeat 2 25 0 284 293 0 0 chr5 69099752 69099827 -133985705 - MER117 DNA MER1_type -72 125 51 1663 157 4 8 chr5 69101448 69101703 -133983829 - AluSx SINE Alu -12 300 47 557 255 87 0 chr5 69101707 69101856 -133983676 + MLT1D LTR MaLR 341 502 -3 2045 120 20 0 chr5 69102352 69102644 -133982888 - AluSx SINE Alu -14 298 1 2558 74 0 3 chr5 69103606 69103917 -133981615 - AluY SINE Alu -1 310 1 334 102 61 0 chr5 69104769 69104818 -133980714 - MLT1H LTR MaLR -413 54 3 375 209 26 111 chr5 69104871 69105024 -133980508 - L1M4 LINE L1 -1276 4870 4731 2219 122 0 3 chr5 69105115 69105410 -133980122 + AluSq SINE Alu 1 294 -19 1094 278 123 23 chr5 69105480 69105879 -133979653 - MLT1H LTR MaLR -110 439 1 217 283 0 0 chr5 69106260 69106313 -133979219 - L2 LINE L2 0 3313 3261 358 268 10 0 chr5 69106349 69106446 -133979086 - MER5B DNA MER1_type -80 98 1 400 229 229 0 chr5 69106726 69106866 -133978666 - MER5A DNA MER1_type 0 189 18 269 316 104 21 chr5 69107120 69107339 -133978193 + MIR3 SINE MIR 5 253 -9 2187 115 3 3 chr5 69108188 69108492 -133977040 + AluSc SINE Alu 1 304 -5 747 276 72 43 chr5 69109632 69110118 -133975414 + MER39 LTR ERV1 1 707 0 230 0 33 0 chr5 69110469 69110499 -133975033 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 677 140 10 0 chr5 69110501 69110601 -133974931 - AluSg/x SINE Alu -30 279 179 181 292 0 0 chr5 69110772 69110837 -133974695 + L3b LINE CR1 1155 1219 -364 201 358 75 30 chr5 69110943 69111077 -133974455 - L2 LINE L2 -8 3264 3125 1939 136 7 17 chr5 69111440 69111734 -133973798 - AluSx SINE Alu -9 303 13 191 36 36 0 chr5 69111946 69111974 -133973558 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 267 279 12 12 chr5 69112746 69112832 -133972700 + MER5B DNA MER1_type 23 108 -70 574 180 27 87 chr5 69114474 69114657 -133970875 + MER5B DNA MER1_type 1 172 -6 3291 156 64 0 chr5 69114941 69115487 -133970045 - LTR26 LTR ERV1 -22 581 1 327 273 148 3 chr5 69115497 69115669 -133969863 - MIR SINE MIR -30 232 34 1583 227 60 38 chr5 69116152 69116632 -133968900 - MER34B LTR ERV1 0 585 80 611 160 5 43 chr5 69116642 69116829 -133968703 + CT-rich Low_complexity Low_complexity 1 180 0 1604 159 8 4 chr5 69116870 69117115 -133968417 - AluJb SINE Alu -51 261 16 242 207 69 0 chr5 69117150 69117208 -133968324 - MER34C LTR ERV1 -484 101 40 2356 83 3 29 chr5 69117477 69117790 -133967742 - AluSq SINE Alu -8 305 1 241 217 33 75 chr5 69118518 69118638 -133966894 + MIR SINE MIR 78 192 -70 1881 161 10 0 chr5 69119073 69119371 -133966161 - AluJb SINE Alu -11 301 1 2214 89 3 3 chr5 69119453 69119760 -133965772 + AluSp SINE Alu 1 307 0 6192 180 80 19 chr5 69119938 69120176 -133965356 - Charlie1a DNA MER1_type -1307 1454 1232 2251 52 52 58 chr5 69120176 69120485 -133965047 - AluY SINE Alu -4 307 1 6192 180 80 19 chr5 69120485 69121617 -133963915 - Charlie1a DNA MER1_type -1529 1232 1 570 247 74 26 chr5 69122388 69122578 -133962954 + MIR SINE MIR 50 248 -14 186 103 0 0 chr5 69122586 69122615 -133962917 + (TTA)n Simple_repeat Simple_repeat 3 31 0 851 238 102 66 chr5 69122666 69122998 -133962534 - LTR37B LTR ERV1 0 468 83 343 238 12 0 chr5 69123096 69123176 -133962356 - MIR SINE MIR -130 132 52 3052 152 34 27 chr5 69124110 69124671 -133960861 - MER34B LTR ERV1 0 565 1 1023 119 6 6 chr5 69124802 69124961 -133960571 - L1PB3 LINE L1 0 6154 5996 695 218 95 27 chr5 69126941 69127339 -133958193 - MLT1D LTR MaLR 0 505 6 271 390 39 0 chr5 69127806 69127960 -133957572 - L2 LINE L2 -2106 1208 1049 24 0 0 0 chr5 69127990 69128014 -133957518 + AT_rich Low_complexity Low_complexity 1 24 0 622 227 43 43 chr5 69128039 69128224 -133957308 - MIR SINE MIR -73 189 5 34 0 0 0 chr5 69128759 69128793 -133956739 + AT_rich Low_complexity Low_complexity 1 34 0 1818 178 40 8 chr5 69128794 69129171 -133956361 + Charlie5 DNA MER1_type 2235 2623 0 217 303 129 39 chr5 69131177 69131332 -133954200 - L3b LINE CR1 -108 1475 1307 219 247 86 43 chr5 69133022 69133115 -133952417 - MIR SINE MIR -47 215 119 618 245 25 6 chr5 69133341 69133500 -133952032 + MER103 DNA DNA 3 164 -2 417 167 0 0 chr5 69133798 69133876 -133951656 + (TG)n Simple_repeat Simple_repeat 1 78 0 1468 192 4 4 chr5 69134392 69134652 -133950880 + AluJb SINE Alu 15 274 -38 206 278 181 28 chr5 69135130 69135202 -133950330 + L2 LINE L2 3210 3292 -21 1693 171 4 0 chr5 69135263 69135526 -133950006 + AluJo SINE Alu 1 264 -48 289 0 0 47 chr5 69135526 69135569 -133949963 + (GA)n Simple_repeat Simple_repeat 2 42 0 996 178 39 43 chr5 69135704 69135862 -133949670 - AluJo SINE Alu -22 290 132 2127 114 0 23 chr5 69135862 69136161 -133949371 - AluSg SINE Alu -17 293 2 996 178 39 43 chr5 69136161 69136232 -133949300 - AluJo SINE Alu -180 132 62 1576 219 70 72 chr5 69136663 69137105 -133948427 + L1ME3A LINE L1 5640 6082 -88 1444 191 3 57 chr5 69137105 69137403 -133948129 + AluJb SINE Alu 1 282 -30 1576 219 70 72 chr5 69137403 69137490 -133948042 + L1ME3A LINE L1 6082 6168 -2 2212 143 36 12 chr5 69139374 69139703 -133945829 - MER1B DNA MER1_type 0 337 1 429 243 39 0 chr5 69140017 69140120 -133945412 - L1MA9 LINE L1 -32 6280 6174 2116 130 0 25 chr5 69140320 69140636 -133944896 - AluSx SINE Alu -4 308 1 1858 132 15 0 chr5 69140735 69141008 -133944524 - AluSx SINE Alu -8 304 28 555 222 62 51 chr5 69141547 69141723 -133943809 - MER5B DNA MER1_type 0 178 1 1452 250 41 72 chr5 69142809 69143368 -133942164 + MER34 LTR ERV1 1 542 0 485 327 19 19 chr5 69143488 69143650 -133941882 + MIR3 SINE MIR 40 201 -7 512 303 76 10 chr5 69143859 69144057 -133941475 + MLT1J1 LTR MaLR 84 294 -152 2179 128 0 3 chr5 69144273 69144585 -133940947 - AluSx SINE Alu -1 311 1 1520 197 4 4 chr5 69145848 69146122 -133939410 + AluJb SINE Alu 1 274 -38 219 273 204 23 chr5 69146600 69146688 -133938844 + L2 LINE L2 3210 3313 0 1564 173 15 0 chr5 69146735 69146995 -133938537 + AluJo SINE Alu 1 264 -48 279 0 0 0 chr5 69146995 69147026 -133938506 + (GA)n Simple_repeat Simple_repeat 2 32 0 902 179 6 6 chr5 69147154 69147310 -133938222 - AluJo/FRAM SINE Alu -23 289 134 2156 100 0 20 chr5 69147311 69147610 -133937922 - AluY SINE Alu -18 293 1 1396 107 0 0 chr5 69147723 69147900 -133937632 - AluSg SINE Alu -132 178 2 721 165 33 25 chr5 69147918 69148039 -133937493 - FLAM_C SINE Alu -11 122 1 2298 42 0 0 chr5 69149612 69149877 -133935655 - AluY SINE Alu -46 265 1 24 32 0 0 chr5 69149943 69149974 -133935558 + AT_rich Low_complexity Low_complexity 1 31 0 279 276 149 0 chr5 69150351 69150438 -133935094 - L2 LINE L2 -4 3268 3169 235 372 32 0 chr5 69151284 69151378 -133934154 - L3 LINE CR1 -1192 385 289 784 301 57 69 chr5 69152932 69153426 -133932106 + L2 LINE L2 2220 2708 -606 2352 106 0 0 chr5 69153426 69153727 -133931805 + AluSx SINE Alu 1 301 -11 784 301 57 69 chr5 69153727 69153781 -133931751 + L2 LINE L2 2708 2761 -553 360 286 0 54 chr5 69154172 69154284 -133931248 + L2 LINE L2 3199 3304 -9 532 120 100 40 chr5 69154873 69154973 -133930559 - PABL_A-int LTR ERV1 -258 4757 4652 21 0 0 0 chr5 69155192 69155213 -133930319 + AT_rich Low_complexity Low_complexity 1 21 0 1054 216 19 0 chr5 69157378 69157586 -133927946 - AluJo SINE Alu -100 212 1 232 262 111 48 chr5 69157587 69157713 -133927819 + MIR SINE MIR 49 182 -80 521 261 67 17 chr5 69157830 69158010 -133927522 + MIR3 SINE MIR 16 204 -4 238 267 229 0 chr5 69158081 69158186 -133927346 + L2 LINE L2 2573 2701 -613 364 272 100 132 chr5 69158239 69158543 -133926989 + L2 LINE L2 2848 3160 -112 1982 193 14 14 chr5 69158543 69158906 -133926626 + MLT1A1 LTR MaLR 1 363 -2 1497 226 111 17 chr5 69158910 69159064 -133926468 + MSTD LTR MaLR 1 139 -257 2292 110 0 0 chr5 69159064 69159364 -133926168 + AluSx SINE Alu 6 305 -7 1497 226 111 17 chr5 69159364 69159571 -133925961 + MSTD LTR MaLR 139 396 0 364 272 100 132 chr5 69159571 69159662 -133925870 + L2 LINE L2 3163 3235 -37 1084 247 47 83 chr5 69159916 69160386 -133925146 - MLT1H LTR MaLR 0 549 97 40639 79 15 3 chr5 69161158 69167237 -133918295 + L1PA5 LINE L1 1 6154 0 414 182 82 107 chr5 69167382 69167448 -133918084 - MIR SINE MIR -33 229 163 1539 106 60 0 chr5 69167448 69167665 -133917867 - MER30 DNA MER1_type 0 230 1 414 182 82 107 chr5 69167665 69167757 -133917775 - MIR SINE MIR -99 163 75 921 174 33 148 chr5 69167936 69168206 -133917326 - MER8 DNA MER2_type 0 239 1 2195 133 11 43 chr5 69168214 69168561 -133916971 + MER1B DNA MER1_type 2 337 0 866 275 18 27 chr5 69168613 69168835 -133916697 - MER58A DNA MER1_type 0 224 5 303 289 66 59 chr5 69170206 69170358 -133915174 + HAL1 LINE L1 5 157 -2350 1258 166 19 0 chr5 69170358 69170563 -133914969 - MER3 DNA MER1_type 0 209 1 1144 238 163 32 chr5 69170644 69171055 -133914477 + MLT1C LTR MaLR 1 465 -2 818 214 32 9 chr5 69171728 69171948 -133913584 - MER69 DNA AcHobo -3 2523 2299 2479 220 36 80 chr5 69171997 69172101 -133913431 - MER69 DNA AcHobo -1844 682 575 2662 134 45 26 chr5 69172101 69172527 -133913005 - Tigger2a DNA MER2_type 0 434 1 2479 220 36 80 chr5 69172527 69173135 -133912397 - MER69 DNA AcHobo -1951 575 1 246 241 228 48 chr5 69174003 69174148 -133911384 + MIR SINE MIR 37 207 -55 218 140 0 40 chr5 69174300 69174350 -133911182 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 23 33 0 0 chr5 69174714 69174744 -133910788 + AT_rich Low_complexity Low_complexity 1 30 0 559 285 84 42 chr5 69175687 69176070 -133909462 + L1ME4a LINE L1 5265 5663 -458 1211 261 68 25 chr5 69176214 69176582 -133908950 + LTR40b LTR ERVL 4 387 -75 530 200 0 0 chr5 69176584 69176674 -133908858 + MLT1A2 LTR MaLR 5 94 -280 2537 187 103 8 chr5 69176674 69177149 -133908383 + MLT2B1 LTR ERVL 1 520 0 400 237 136 0 chr5 69177149 69177266 -133908266 - L1ME LINE L1 -365 5797 5667 342 244 145 15 chr5 69177438 69177569 -133907963 + L1ME4a LINE L1 5968 6115 -6 1275 255 50 71 chr5 69178348 69178479 -133907053 + MSTB1 LTR MaLR 1 133 -299 6869 77 6 16 chr5 69178479 69179475 -133906057 + L1PA7 LINE L1 5169 6154 0 1275 255 50 71 chr5 69179475 69179834 -133905698 + MSTB1 LTR MaLR 133 432 0 2223 156 144 44 chr5 69180505 69181005 -133904527 - MER44D DNA MER2_type 0 605 1 25 31 0 0 chr5 69181134 69181166 -133904366 + AT_rich Low_complexity Low_complexity 1 32 0 705 142 7 121 chr5 69181167 69181308 -133904224 - FLAM_A SINE Alu -5 128 4 250 310 1 62 chr5 69181899 69182012 -133903520 - MER90 LTR ERV1 0 614 479 23 0 0 0 chr5 69184698 69184721 -133900811 + AT_rich Low_complexity Low_complexity 1 23 0 251 360 34 20 chr5 69184829 69184976 -133900556 + MIR3 SINE MIR 35 183 -25 237 198 86 0 chr5 69186213 69186294 -133899238 - Charlie7 DNA MER1_type -2455 157 70 490 230 79 0 chr5 69187266 69187405 -133898127 - MER103 DNA DNA -7 159 10 206 31 0 31 chr5 69188443 69188475 -133897057 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2242 120 10 0 chr5 69188791 69189100 -133896432 + AluSq SINE Alu 1 312 -1 417 339 75 29 chr5 69189596 69189831 -133895701 - MIR SINE MIR -12 250 5 2559 33 3 0 chr5 69190034 69190335 -133895197 - AluY SINE Alu -9 302 1 350 246 45 27 chr5 69191608 69191718 -133893814 - MIR SINE MIR -72 190 79 702 248 84 81 chr5 69191892 69192215 -133893317 - MER102b DNA MER1_type -12 329 6 5159 73 0 0 chr5 69192699 69193358 -133892174 - L1PA7 LINE L1 -8 6146 5488 541 240 43 125 chr5 69193806 69193944 -133891588 - MIR SINE MIR -2 260 155 2483 74 0 0 chr5 69193944 69194253 -133891279 + AluY SINE Alu 1 309 -2 541 240 43 125 chr5 69194253 69194393 -133891139 - MIR SINE MIR -107 155 5 231 222 32 0 chr5 69194779 69194842 -133890690 - L1ME LINE L1 -304 5817 5753 768 216 70 10 chr5 69196104 69196303 -133889229 + MIR SINE MIR 52 262 0 199 309 101 13 chr5 69196555 69196704 -133888828 + L3b LINE CR1 1104 1265 -318 349 243 101 7 chr5 69196926 69197074 -133888458 + LTR33 LTR ERVL 109 270 -251 602 294 13 0 chr5 69197107 69197260 -133888272 + L2 LINE L2 3159 3313 0 1129 256 119 40 chr5 69197507 69198255 -133887277 - L2 LINE L2 0 3313 2524 860 275 147 3 chr5 69199026 69199360 -133886172 - L2 LINE L2 -13 3300 2919 1265 184 86 4 chr5 69199761 69200017 -133885515 + MSTD LTR MaLR 118 394 -2 568 309 28 52 chr5 69200017 69200305 -133885227 - L3 LINE CR1 -304 1273 993 220 305 86 29 chr5 69200405 69200510 -133885022 + MIR SINE MIR 31 141 -121 253 118 0 145 chr5 69200707 69200783 -133884749 + L2 LINE L2 3242 3306 -7 2147 101 7 0 chr5 69201783 69202094 -133883438 - AluSg SINE Alu 0 315 3 231 318 12 59 chr5 69203796 69203881 -133881651 + L2 LINE L2 3183 3263 -9 202 239 155 14 chr5 69203979 69204050 -133881482 - L2 LINE L2 -12 3301 3221 1968 152 10 0 chr5 69204287 69204576 -133880956 - AluSx SINE Alu -20 292 1 615 142 33 37 chr5 69204886 69205020 -133880512 + Charlie5 DNA MER1_type 1 124 -2488 1539 135 72 19 chr5 69205025 69205388 -133880144 + Charlie5 DNA MER1_type 2243 2624 0 3858 69 31 6 chr5 69205406 69206408 -133879124 - MER11A LTR ERVK 0 1266 1 242 274 0 0 chr5 69206573 69206635 -133878897 + CT-rich Low_complexity Low_complexity 6 67 0 2106 132 0 0 chr5 69206869 69207164 -133878368 + AluSc SINE Alu 1 295 -14 293 183 61 13 chr5 69207497 69207613 -133877919 - MER3 DNA MER1_type -1 208 35 7349 18 2 0 chr5 69207613 69208503 -133877029 - L1PA2 LINE L1 -4 6151 5260 2199 220 37 80 chr5 69208989 69209597 -133875935 + MER69 DNA AcHobo 1 575 -1951 2446 132 45 26 chr5 69209597 69210023 -133875509 + Tigger2a DNA MER2_type 1 434 0 2199 220 37 80 chr5 69210023 69210123 -133875409 + MER69 DNA AcHobo 575 678 -1848 719 214 32 9 chr5 69210175 69210395 -133875137 + MER69 DNA AcHobo 2299 2523 -3 837 222 171 19 chr5 69211068 69211479 -133874053 - MLT1C LTR MaLR -2 503 1 1152 166 19 0 chr5 69211560 69211765 -133873767 + MER3 DNA MER1_type 1 209 0 246 315 54 47 chr5 69211765 69211914 -133873618 - HAL1 LINE L1 -2350 157 8 805 270 18 27 chr5 69213288 69213510 -133872022 + MER58A DNA MER1_type 5 224 0 2052 133 11 43 chr5 69213562 69213909 -133871623 - MER1B DNA MER1_type 0 337 2 822 174 33 148 chr5 69213917 69214187 -133871345 + MER8 DNA MER2_type 1 239 0 419 182 82 107 chr5 69214367 69214459 -133871073 + MIR SINE MIR 75 163 -99 1429 106 60 0 chr5 69214459 69214676 -133870856 + MER30 DNA MER1_type 1 230 0 419 182 82 107 chr5 69214676 69214742 -133870790 + MIR SINE MIR 163 229 -33 39894 46 27 6 chr5 69214892 69220902 -133864630 - L1PA5 LINE L1 -4 6150 1 2146 151 29 67 chr5 69221007 69221456 -133864076 + MSTB1 LTR MaLR 1 432 0 13062 73 7 1 chr5 69222711 69225249 -133860283 - L1PA7 LINE L1 -1 6153 3607 225 200 40 0 chr5 69225274 69225324 -133860208 - MER44D DNA MER2_type -653 52 1 1954 122 52 3 chr5 69225645 69225932 -133859600 + AluSx SINE Alu 1 301 -11 327 361 8 0 chr5 69226698 69226820 -133858712 - MIR SINE MIR -28 234 112 281 284 53 68 chr5 69226872 69227062 -133858470 + MLT1L LTR MaLR 342 528 -87 182 310 40 50 chr5 69227247 69227347 -133858185 - L2 LINE L2 -531 2783 2685 1546 192 17 3 chr5 69227707 69227999 -133857533 + AluJo SINE Alu 1 296 -16 2052 255 16 12 chr5 69228303 69228817 -133856715 + MLT1F LTR MaLR 27 542 0 310 271 197 62 chr5 69229391 69229716 -133855816 + L1M4 LINE L1 4943 5311 -835 2164 134 0 19 chr5 69229878 69230192 -133855340 - AluSx SINE Alu -4 308 1 29054 43 34 0 chr5 69233582 69237409 -133848123 + L1PA2 LINE L1 1 3956 -2190 12733 21 0 0 chr5 69237409 69239662 -133845870 + L1PA2 LINE L1 3899 6152 -3 305 85 0 51 chr5 69239665 69239724 -133845808 + (A)n Simple_repeat Simple_repeat 1 56 0 195 233 233 0 chr5 69240173 69240263 -133845269 - MIR SINE MIR -18 244 134 13355 124 36 31 chr5 69241395 69241588 -133843944 + Tigger1 DNA MER2_type 24 215 -2203 1831 183 3 0 chr5 69241588 69241888 -133843644 - AluJb SINE Alu -11 301 1 13355 124 36 31 chr5 69241888 69242541 -133842991 + Tigger1 DNA MER2_type 215 864 -1554 2120 117 17 0 chr5 69242541 69242841 -133842691 - AluSc SINE Alu -4 305 1 13355 124 36 31 chr5 69242841 69244374 -133841158 + Tigger1 DNA MER2_type 864 2414 -4 251 208 104 13 chr5 69244604 69244681 -133840851 + MIR SINE MIR 108 191 -71 637 272 66 12 chr5 69245347 69245604 -133839928 - L1ME2 LINE L1 -2 6162 5892 1884 191 78 50 chr5 69247498 69247955 -133837577 + MLT2B1 LTR ERVL 1 475 -45 240 86 0 0 chr5 69247955 69247990 -133837542 + (CTTAT)n Simple_repeat Simple_repeat 3 37 0 1884 191 78 50 chr5 69247990 69248035 -133837497 + MLT2B1 LTR ERVL 475 517 -3 2470 108 8 3 chr5 69248171 69248524 -133837008 - THE1A LTR MaLR 0 355 1 11987 85 8 1 chr5 69248524 69250093 -133835439 - THE1A-int LTR MaLR 0 1580 1 2314 130 8 3 chr5 69250093 69250446 -133835086 - THE1A LTR MaLR 0 355 1 787 202 93 6 chr5 69251114 69251297 -133834235 - MER3 DNA MER1_type -4 205 7 474 305 94 17 chr5 69251319 69251552 -133833980 - MIR SINE MIR 0 262 12 580 169 47 118 chr5 69251834 69252088 -133833444 + MLT1A1 LTR MaLR 1 236 -129 1905 175 5 21 chr5 69252151 69252529 -133833003 + L1MB5 LINE L1 5797 6168 -6 702 180 123 24 chr5 69252530 69252741 -133832791 + L1MD1 LINE L1 5591 5822 -420 378 292 8 15 chr5 69252741 69253004 -133832528 + GA-rich Low_complexity Low_complexity 1 261 0 1083 200 43 6 chr5 69253004 69253351 -133832181 + L1MD1 LINE L1 5815 6236 -6 36328 83 13 11 chr5 69253415 69259540 -133825992 + L1PA6 LINE L1 11 6143 -11 287 320 87 0 chr5 69259704 69259846 -133825686 - MIR SINE MIR -62 146 31 520 239 0 0 chr5 69259952 69260065 -133825467 - MLT1A1 LTR MaLR -1 364 252 2910 171 8 75 chr5 69260067 69260711 -133824821 + LTR9 LTR ERV1 1 601 -11 3133 198 48 20 chr5 69260714 69261607 -133823925 - L1MDa LINE L1 -4608 1932 1015 3504 149 23 2 chr5 69261626 69262245 -133823287 - L1MA4A LINE L1 -2 6301 5670 1076 173 5 0 chr5 69262255 69262457 -133823075 - L1MA4A LINE L1 -1281 4865 4663 * 12490 191 64 20 chr5 69262451 69267908 -133817624 - L1M1 LINE L1 -641 6364 652 3115 253 53 11 chr5 69267914 69268749 -133816783 - L1MDa LINE L1 -5654 886 17 2387 63 0 17 chr5 69269164 69269463 -133816069 + AluY SINE Alu 1 294 -17 14759 151 36 14 chr5 69271574 69276573 -133808959 - L1M1 LINE L1 -743 6822 1827 6977 61 4 21 chr5 69276677 69277733 -133807799 - L1P LINE L1 -3604 2542 1505 17597 85 5 5 chr5 69277837 69280478 -133805054 + L1P LINE L1 957 3597 -2549 310 275 47 58 chr5 69281302 69281330 -133804202 - MLT1K LTR MaLR -17 571 544 1814 118 4 0 chr5 69281330 69281576 -133803956 - AluSp SINE Alu -66 247 1 310 275 47 58 chr5 69281576 69281718 -133803814 - MLT1K LTR MaLR -44 544 403 538 248 84 44 chr5 69282081 69282331 -133803201 + L3 LINE CR1 1298 1557 -20 23 0 0 0 chr5 69282631 69282654 -133802878 + AT_rich Low_complexity Low_complexity 1 23 0 544 344 40 0 chr5 69282984 69283208 -133802324 + MIR SINE MIR 16 248 -14 21 57 0 0 chr5 69283893 69283928 -133801604 + AT_rich Low_complexity Low_complexity 1 35 0 914 97 0 8 chr5 69285674 69285798 -133799734 + FLAM_C SINE Alu 1 123 -20 827 256 53 16 chr5 69285938 69286184 -133799348 + MIR SINE MIR 8 262 0 582 224 39 62 chr5 69286274 69286453 -133799079 - MER5A DNA MER1_type -2 187 13 194 91 30 0 chr5 69287690 69287723 -133797809 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 258 279 186 28 chr5 69288351 69288598 -133796934 - MLT1J LTR MaLR -2 509 224 1124 272 128 5 chr5 69288892 69289267 -133796265 - LTR16C LTR ERVL 0 491 71 2206 210 98 19 chr5 69289420 69290000 -133795532 - MLT1E2 LTR MaLR 0 626 1 651 187 32 16 chr5 69290378 69290501 -133795031 + FRAM SINE Alu 36 160 -16 822 182 0 21 chr5 69291587 69291730 -133793802 - FLAM_C SINE Alu -1 142 3 263 278 103 8 chr5 69291994 69292120 -133793412 - L1M4 LINE L1 -385 5793 5656 2145 288 19 18 chr5 69293558 69294395 -133791137 - L1MEc LINE L1 -5522 874 37 2025 130 3 3 chr5 69295593 69295878 -133789654 + AluSx SINE Alu 21 305 -7 636 334 146 37 chr5 69295962 69296525 -133789007 + L2 LINE L2 2354 2977 -337 900 324 102 11 chr5 69296530 69297003 -133788529 + MLT1H1 LTR MaLR 3 518 -37 616 146 99 10 chr5 69297267 69297459 -133788073 + LTR1 LTR ERV1 1 209 -576 3895 123 30 42 chr5 69297568 69298290 -133787242 + LTR1 LTR ERV1 72 785 0 191 279 44 0 chr5 69298290 69298358 -133787174 + L2 LINE L2 3243 3313 0 815 57 9 0 chr5 69298628 69298734 -133786798 + L1PA8 LINE L1 6058 6164 -8 781 211 28 0 chr5 69300321 69300501 -133785031 + MER5A DNA MER1_type 5 189 0 26973 48 1 0 chr5 69301160 69305495 -133780037 - L1PA5 LINE L1 -1 6153 1816 2101 119 0 0 chr5 69305769 69306082 -133779450 + AluSq SINE Alu 1 313 0 3510 189 60 18 chr5 69306085 69307165 -133778367 - L1MB2 LINE L1 -12 6159 5038 29 60 0 0 chr5 69307406 69307456 -133778076 + AT_rich Low_complexity Low_complexity 1 50 0 848 273 79 73 chr5 69308399 69309053 -133776479 - L2 LINE L2 -9 3304 2646 21 95 0 0 chr5 69309076 69309139 -133776393 + AT_rich Low_complexity Low_complexity 1 63 0 1559 213 81 19 chr5 69309174 69309695 -133775837 - L1M4 LINE L1 -743 5403 4851 2093 118 69 20 chr5 69310058 69310405 -133775127 + THE1B LTR MaLR 1 364 0 417 296 15 0 chr5 69311000 69311132 -133774400 - MER5B DNA MER1_type -32 146 13 1127 206 24 40 chr5 69311509 69311867 -133773665 - MLT2B3 LTR ERVL 0 554 207 4129 106 0 7 chr5 69311867 69312479 -133773053 - HERVL LTR ERVL -5046 608 1 1599 161 109 29 chr5 69312479 69312649 -133772883 - THE1C LTR MaLR 0 375 220 279 0 0 0 chr5 69312649 69312680 -133772852 + (GA)n Simple_repeat Simple_repeat 1 31 0 1599 161 109 29 chr5 69312680 69312856 -133772676 - THE1C LTR MaLR -155 220 1 2256 106 50 31 chr5 69313175 69313532 -133772000 - THE1B LTR MaLR 0 364 1 1650 59 9 0 chr5 69313532 69313753 -133771779 - THE1B-int LTR MaLR 0 1580 1358 1174 232 24 50 chr5 69313753 69314050 -133771482 - MSTB1 LTR MaLR -95 337 49 2252 150 5 19 chr5 69314050 69314417 -133771115 - THE1B LTR MaLR 0 364 3 1814 103 4 4 chr5 69314419 69314690 -133770842 - THE1B-int LTR MaLR 0 1580 1310 4298 157 199 2 chr5 69314796 69315834 -133769698 + L1PB1 LINE L1 845 2087 -4776 * 5681 145 17 2 chr5 69315811 69316824 -133768708 + L1PB1 LINE L1 5474 6515 -352 378 0 0 0 chr5 69316824 69316866 -133768666 + (TA)n Simple_repeat Simple_repeat 2 43 0 5681 145 17 2 chr5 69316866 69317225 -133768307 + L1PB1 LINE L1 6515 6867 0 28 0 0 0 chr5 69317225 69317253 -133768279 + AT_rich Low_complexity Low_complexity 1 28 0 306 319 235 5 chr5 69317274 69317478 -133768054 - MIR SINE MIR -10 252 2 185 344 97 21 chr5 69317726 69317819 -133767713 + L2 LINE L2 3138 3237 -35 340 240 0 16 chr5 69318024 69318149 -133767383 - AluSg/x SINE Alu 0 300 199 201 219 0 0 chr5 69318153 69318226 -133767306 + C-rich Low_complexity Low_complexity 1 73 0 8283 118 7 4 chr5 69318329 69319597 -133765935 - THE1B-int LTR MaLR -308 1272 1 2146 120 50 31 chr5 69319597 69319954 -133765578 - THE1B LTR MaLR 0 364 1 1224 183 19 16 chr5 69320117 69320374 -133765158 + MER51C LTR ERV1 383 640 0 292 225 108 48 chr5 69320380 69320588 -133764944 - L1MC/D LINE L1 -835 5456 5259 317 289 96 12 chr5 69320849 69321015 -133764517 - L1MC/D LINE L1 -3719 2427 2248 1438 116 5 5 chr5 69321040 69321255 -133764277 - MER4B LTR ERV1 0 610 396 297 80 20 20 chr5 69321297 69321347 -133764185 - MER4A LTR ERV1 -354 310 261 307 69 375 14 chr5 69321347 69321419 -133764113 - MER4A LTR ERV1 -566 98 1 2426 143 10 2 chr5 69321490 69321890 -133763642 + MER57A LTR ERV1 1 403 0 673 193 7 7 chr5 69323532 69323672 -133761860 + MLT1A2 LTR MaLR 227 366 -8 1086 248 13 10 chr5 69323718 69324025 -133761507 + L1PBa LINE L1 6 313 -6550 8349 191 28 7 chr5 69324359 69325946 -133759586 - L1M1 LINE L1 -5631 1934 315 2940 191 120 51 chr5 69325950 69327020 -133758512 - MER52A LTR ERV1 -173 1105 169 864 260 31 0 chr5 69327039 69327327 -133758205 - L1M4 LINE L1 -743 5403 5107 41947 40 2 2 chr5 69327355 69333504 -133752028 + L1PA3 LINE L1 2 6152 -3 24 0 0 0 chr5 69333732 69333756 -133751776 + AT_rich Low_complexity Low_complexity 1 24 0 2287 102 17 0 chr5 69334617 69334912 -133750620 + AluSg SINE Alu 1 300 -10 1061 190 60 53 chr5 69335213 69335497 -133750035 - MLT1A1 LTR MaLR 0 365 80 302 268 140 35 chr5 69336619 69336933 -133748599 + L1MEc LINE L1 1372 1773 -803 744 306 142 31 chr5 69337252 69337957 -133747575 + L1MEc LINE L1 2153 2899 -3316 4607 174 30 8 chr5 69337959 69339197 -133746335 + L1MC1 LINE L1 4787 6056 -277 1375 111 6 0 chr5 69339247 69339428 -133746104 - AluSc SINE Alu -127 182 1 21 0 0 0 chr5 69339805 69339826 -133745706 + AT_rich Low_complexity Low_complexity 1 21 0 356 229 84 38 chr5 69340046 69340177 -133745355 - MIR SINE MIR -122 140 4 1769 210 66 47 chr5 69340185 69340637 -133744895 + MLT2B1 LTR ERVL 1 461 -59 1766 108 42 4 chr5 69340698 69340958 -133744574 + AluSg SINE Alu 32 301 -9 609 283 91 33 chr5 69341099 69341495 -133744037 + L1ME4a LINE L1 5311 5729 -2079 24 0 0 0 chr5 69341992 69342016 -133743516 + AT_rich Low_complexity Low_complexity 1 24 0 302 217 7 130 chr5 69342487 69342625 -133742907 + L1ME4a LINE L1 5963 6083 -38 33 43 0 29 chr5 69342635 69342680 -133742852 + AT_rich Low_complexity Low_complexity 1 45 -22 426 103 15 0 chr5 69342680 69342748 -133742784 - L1PB4 LINE L1 -8 6148 6080 33 43 0 29 chr5 69342748 69342771 -133742761 + AT_rich Low_complexity Low_complexity 45 67 0 617 154 91 0 chr5 69343889 69343999 -133741533 - AluSq/x SINE Alu -188 124 5 358 322 13 20 chr5 69344078 69344230 -133741302 - MER5A DNA MER1_type -3 186 36 2213 101 0 7 chr5 69344233 69344529 -133741003 - AluSc SINE Alu -15 294 1 1793 176 0 3 chr5 69346092 69346382 -133739150 + AluJb SINE Alu 6 294 -18 1912 125 17 17 chr5 69346924 69347212 -133738320 + AluJo SINE Alu 3 290 -22 2014 149 43 0 chr5 69347836 69348164 -133737368 - MER2 DNA MER2_type 0 344 3 347 186 401 12 chr5 69348438 69348605 -133736927 + L1ME3A LINE L1 5939 6170 0 802 202 50 13 chr5 69349187 69349425 -133736107 + L1MEc LINE L1 2008 2254 -4142 1088 244 107 5 chr5 69349433 69349864 -133735668 + L1MEc LINE L1 2984 3458 -2757 958 278 102 19 chr5 69349916 69350287 -133735245 + L1MEc LINE L1 3752 4153 -2062 467 270 184 0 chr5 69350395 69350558 -133734974 - MIR SINE MIR 0 262 70 853 271 117 10 chr5 69351154 69351453 -133734079 + MLT1I LTR MaLR 27 357 -52 883 235 95 29 chr5 69351775 69351842 -133733690 - MIR SINE MIR 0 262 201 1600 180 38 46 chr5 69351842 69352215 -133733317 + MLT1A2 LTR MaLR 1 370 -4 883 235 95 29 chr5 69352215 69352390 -133733142 - MIR SINE MIR -61 201 4 1681 154 45 24 chr5 69352433 69352662 -133732870 - MER44D DNA MER2_type -1883 608 385 195 42 0 0 chr5 69352662 69352686 -133732846 + (TC)n Simple_repeat Simple_repeat 1 24 0 1681 154 45 24 chr5 69352686 69352787 -133732745 - MER44D DNA MER2_type -2106 385 1 643 289 44 48 chr5 69353958 69354207 -133731325 - MIR SINE MIR -12 250 3 248 275 0 100 chr5 69354311 69354391 -133731141 - L2 LINE L2 -3 3269 3198 180 0 0 0 chr5 69354594 69354614 -133730918 + (CAATT)n Simple_repeat Simple_repeat 2 21 0 367 252 68 10 chr5 69354625 69354728 -133730804 - L2 LINE L2 -19 3253 3145 30606 114 13 51 chr5 69354982 69361011 -133724521 - L1PA8 LINE L1 0 6172 401 216 0 0 0 chr5 69361011 69361035 -133724497 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 30606 114 13 51 chr5 69361035 69361422 -133724110 - L1PA8 LINE L1 -5771 401 1 213 39 0 0 chr5 69361961 69361987 -133723545 + (TC)n Simple_repeat Simple_repeat 2 27 0 * 381 22 0 0 chr5 69361986 69362032 -133723500 + (TG)n Simple_repeat Simple_repeat 1 46 0 512 327 71 5 chr5 69362059 69362270 -133723262 + MIR SINE MIR 36 260 -2 26 30 0 0 chr5 69362438 69362471 -133723061 + AT_rich Low_complexity Low_complexity 1 33 0 183 80 0 0 chr5 69362537 69362562 -133722970 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 228 130 0 0 chr5 69363433 69363479 -133722053 + (GA)n Simple_repeat Simple_repeat 2 47 0 342 329 36 15 chr5 69364487 69364624 -133720908 + MIR SINE MIR 123 262 0 303 328 225 15 chr5 69365043 69365743 -133719789 + L2 LINE L2 2433 3313 0 234 244 44 44 chr5 69365780 69365870 -133719662 + MER103 DNA DNA 76 165 -1 2116 84 0 81 chr5 69367102 69367423 -133718109 - AluSg SINE Alu -13 297 3 373 318 58 37 chr5 69367936 69368125 -133717407 + MIR SINE MIR 58 250 -12 340 235 59 12 chr5 69368178 69368263 -133717269 - L2 LINE L2 -17 3296 3208 320 303 46 0 chr5 69368470 69368579 -133716953 + MER103 DNA DNA 3 116 -50 198 114 0 29 chr5 69368595 69368630 -133716902 + L2 LINE L2 3268 3301 -12 24 0 0 0 chr5 69369127 69369151 -133716381 + AT_rich Low_complexity Low_complexity 1 24 0 1521 137 125 35 chr5 69369294 69369638 -133715894 - THE1C LTR MaLR 0 375 1 4510 129 107 100 chr5 69371271 69371866 -133713666 - L1MC3 LINE L1 -3 7782 7090 286 256 70 12 chr5 69371866 69371952 -133713580 - MLT1D LTR MaLR -442 125 35 4510 129 107 100 chr5 69371952 69372344 -133713188 - L1MC3 LINE L1 -695 7090 6702 882 209 87 15 chr5 69372514 69372720 -133712812 - MER58A DNA MER1_type -3 221 1 253 248 154 26 chr5 69372848 69372965 -133712567 + MIR3 SINE MIR 77 208 0 747 267 117 58 chr5 69373316 69373795 -133711737 - MLT1J LTR MaLR 0 511 5 1885 188 85 10 chr5 69373983 69374383 -133711149 - MLT1D LTR MaLR 0 505 76 259 156 0 109 chr5 69374652 69374716 -133710816 - L2 LINE L2 0 3313 3257 5143 202 23 47 chr5 69374774 69375641 -133709891 - L1PA16 LINE L1 -6 6160 5274 183 42 0 0 chr5 69375641 69375665 -133709867 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5143 202 23 47 chr5 69375665 69377179 -133708353 - L1PA16 LINE L1 -892 5274 3859 676 318 145 47 chr5 69377220 69377708 -133707824 + L2 LINE L2 2476 3041 -231 2470 66 3 0 chr5 69377708 69378012 -133707520 - AluY SINE Alu -6 305 1 676 318 145 47 chr5 69378012 69378049 -133707483 + L2 LINE L2 3041 3073 -199 320 395 62 0 chr5 69378149 69378278 -133707254 + L2 LINE L2 3134 3270 -2 879 194 5 46 chr5 69378448 69378644 -133706888 - MER5A DNA MER1_type -1 188 1 417 290 99 14 chr5 69379466 69379655 -133705877 - MIR3 SINE MIR -5 203 3 1731 314 149 16 chr5 69380157 69381465 -133704067 - L2 LINE L2 -15 3298 1812 308 235 35 59 chr5 69381496 69381581 -133703951 - MLT1D LTR MaLR -420 85 3 205 389 78 17 chr5 69383081 69383261 -133702271 - L3 LINE CR1 -319 1258 1068 1472 208 63 6 chr5 69383368 69383685 -133701847 + MLT2B1 LTR ERVL 1 335 -185 2194 117 3 0 chr5 69383761 69384052 -133701480 + AluSx SINE Alu 7 298 -14 324 210 0 0 chr5 69384113 69384194 -133701338 + (TA)n Simple_repeat Simple_repeat 1 81 0 246 241 51 0 chr5 69384296 69384375 -133701157 - L1MC4 LINE L1 -1340 6702 6620 201 114 57 0 chr5 69384382 69384417 -133701115 + (TATG)n Simple_repeat Simple_repeat 4 40 0 392 250 0 0 chr5 69384417 69384517 -133701015 + L1MC4 LINE L1 6907 7006 -1036 428 265 8 8 chr5 69384644 69384761 -133700771 + L1MC5 LINE L1 6980 7096 -865 2050 220 32 76 chr5 69384792 69385383 -133700149 - MER90 LTR ERV1 -10 565 1 618 259 68 14 chr5 69385615 69385835 -133699697 + L1MC5 LINE L1 7674 7905 -56 267 31 0 0 chr5 69387473 69387505 -133698027 + (TG)n Simple_repeat Simple_repeat 1 32 0 1644 201 0 7 chr5 69387647 69387931 -133697601 + AluJb SINE Alu 1 282 -30 198 0 0 0 chr5 69387933 69387955 -133697577 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 606 265 126 33 chr5 69389030 69389532 -133696000 - MLT1G LTR MaLR -3 587 10 1515 281 153 23 chr5 69389764 69389864 -133695668 - L2 LINE L2 -5 3308 3222 6829 68 8 0 chr5 69389864 69390950 -133694582 + L1PA8 LINE L1 5070 6162 -10 1515 281 153 23 chr5 69390950 69391010 -133694522 - L2 LINE L2 -91 3222 3171 309 109 0 0 chr5 69391010 69391056 -133694476 + (TG)n Simple_repeat Simple_repeat 2 47 0 1515 281 153 23 chr5 69391056 69391751 -133693781 - L2 LINE L2 -142 3171 2340 1948 152 36 59 chr5 69391752 69391886 -133693646 - LTR23 LTR ERV1 -2 435 299 2285 89 3 22 chr5 69391886 69391921 -133693611 - AluSp SINE Alu 0 313 279 198 0 0 0 chr5 69391921 69391943 -133693589 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2285 89 3 22 chr5 69391943 69392222 -133693310 - AluSp SINE Alu -34 279 5 1948 152 36 59 chr5 69392222 69392527 -133693005 - LTR23 LTR ERV1 -138 299 6 1071 152 97 9 chr5 69392568 69392785 -133692747 + MLT2B3 LTR ERVL 1 236 -318 218 275 55 44 chr5 69392791 69392882 -133692650 + L2 LINE L2 2966 3057 -215 814 186 100 51 chr5 69392908 69393296 -133692236 + LTR7 LTR ERV1 1 450 0 184 348 15 59 chr5 69393317 69393452 -133692080 + L2 LINE L2 3170 3298 -15 282 320 26 0 chr5 69394076 69394154 -133691378 - AluJ/FLAM SINE Alu -222 80 1 24 77 0 0 chr5 69394761 69394813 -133690719 + AT_rich Low_complexity Low_complexity 1 52 0 350 311 163 0 chr5 69396327 69396462 -133689070 + MIR3 SINE MIR 31 187 -21 1871 144 173 14 chr5 69396959 69397328 -133688204 + MSTA LTR MaLR 1 428 0 580 324 23 0 chr5 69399560 69399733 -133685799 - MER5B DNA MER1_type 0 178 2 1943 138 3 3 chr5 69400341 69400624 -133684908 - AluSx SINE Alu -29 283 1 268 185 49 0 chr5 69401148 69401229 -133684303 + (TA)n Simple_repeat Simple_repeat 2 86 0 363 136 0 0 chr5 69401229 69401288 -133684244 + (TG)n Simple_repeat Simple_repeat 2 60 0 1420 196 21 24 chr5 69401300 69401591 -133683941 - AluJo SINE Alu -22 290 1 1949 140 15 3 chr5 69402398 69402740 -133682792 + L1MB3 LINE L1 5836 6181 -2 775 235 105 92 chr5 69403636 69404180 -133681352 - L1MC4a LINE L1 -1851 5957 5407 222 91 0 0 chr5 69404269 69404302 -133681230 + (TG)n Simple_repeat Simple_repeat 2 34 0 828 308 52 63 chr5 69404319 69404853 -133680679 - L1MC4a LINE L1 -913 5233 4708 2117 102 7 10 chr5 69404853 69405146 -133680386 - AluY SINE Alu -19 292 1 828 308 52 63 chr5 69405146 69405344 -133680188 - L1MC4a LINE L1 -1438 4708 4509 875 157 45 35 chr5 69405412 69405610 -133679922 - L1MC1 LINE L1 0 6333 6134 398 266 8 0 chr5 69405610 69405734 -133679798 - L1MCa LINE L1 -943 5483 5359 14546 226 21 12 chr5 69405737 69410289 -133675243 + L1PA16 LINE L1 1774 6354 -515 1599 165 202 14 chr5 69410322 69410673 -133674859 - MSTA LTR MaLR -11 417 1 2464 136 61 67 chr5 69410675 69411197 -133674335 + L1PA16 LINE L1 6351 6869 0 7694 230 25 15 chr5 69411200 69413382 -133672150 - L1MCa LINE L1 -1054 5372 3168 2328 157 35 37 chr5 69413383 69413759 -133671773 - MSTB1 LTR MaLR 0 432 57 2258 158 8 8 chr5 69413759 69414121 -133671411 - THE1B LTR MaLR -2 362 1 11178 111 11 1 chr5 69414121 69415685 -133669847 - THE1B-int LTR MaLR 0 1580 1 2500 118 8 8 chr5 69415685 69416049 -133669483 - THE1B LTR MaLR 0 364 1 2328 157 35 37 chr5 69416049 69416103 -133669429 - MSTB1 LTR MaLR -372 60 1 1424 265 79 10 chr5 69416108 69416802 -133668730 - L1M4 LINE L1 -3260 3122 2096 * 7710 187 49 14 chr5 69416800 69417580 -133667952 - L1MCa LINE L1 -3959 2648 1897 1520 227 42 8 chr5 69417580 69417787 -133667745 - MLT1A1 LTR MaLR 0 365 140 270 81 0 0 chr5 69417787 69417824 -133667708 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1520 227 42 8 chr5 69417824 69417969 -133667563 - MLT1A1 LTR MaLR -225 140 1 7710 187 49 14 chr5 69417969 69419451 -133666081 - L1MCa LINE L1 -4710 1897 19 415 297 66 9 chr5 69419455 69419667 -133665865 - L1 LINE L1 -1705 4441 4218 1659 166 53 12 chr5 69419755 69420092 -133665440 - MER46B DNA MER2_type -7 229 4 208 0 62 0 chr5 69420092 69420124 -133665408 + (TA)n Simple_repeat Simple_repeat 2 35 0 410 225 90 9 chr5 69421482 69421593 -133663939 + MIR SINE MIR 14 133 -129 1357 225 89 65 chr5 69421593 69422024 -133663508 - MLT1D LTR MaLR 0 505 59 2351 176 31 7 chr5 69422024 69422474 -133663058 + LOR1b LTR ERV1 1 461 0 1357 225 89 65 chr5 69422474 69422535 -133662997 - MLT1D LTR MaLR -446 59 1 354 306 41 8 chr5 69422536 69422657 -133662875 + MIR SINE MIR 130 254 -8 5237 170 12 28 chr5 69423245 69424467 -133661065 - L1MA8 LINE L1 -10 7700 6492 1375 211 57 27 chr5 69424469 69424524 -133661008 - MLT2A2 LTR ERVL -8 445 393 198 71 0 0 chr5 69424524 69424552 -133660980 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3134 40 0 0 chr5 69424553 69424933 -133660599 - L1PA4 LINE L1 -3 6152 5773 1375 211 57 27 chr5 69424933 69425356 -133660176 - MLT2A2 LTR ERVL -59 394 1 13511 170 31 19 chr5 69425359 69428145 -133657387 - L1MA8 LINE L1 -1070 6495 3677 1292 115 47 82 chr5 69428146 69428191 -133657341 - THE1C LTR MaLR 0 375 330 1998 149 7 0 chr5 69428191 69428493 -133657039 + AluSx SINE Alu 1 304 -8 1292 115 47 82 chr5 69428493 69428726 -133656806 - THE1C LTR MaLR -45 330 107 201 132 0 0 chr5 69428765 69428803 -133656729 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 601 235 38 48 chr5 69428818 69429107 -133656425 + pTR5 LTR ERV1 743 1028 -1410 4677 86 17 164 chr5 69429186 69430152 -133655380 + LTR12 LTR ERV1 1 824 -2 2662 263 59 48 chr5 69430158 69430988 -133654544 - L1MA8 LINE L1 -4119 3446 2896 1988 117 0 4 chr5 69430988 69431262 -133654270 - AluY SINE Alu -6 305 33 2662 263 59 48 chr5 69431262 69432074 -133653458 - L1MA8 LINE L1 -4669 2896 2094 1201 318 28 32 chr5 69432162 69432666 -133652866 - L1MA8 LINE L1 -5778 1718 1217 461 228 167 0 chr5 69432939 69433053 -133652479 + MER94 DNA DNA 2 134 0 345 277 10 10 chr5 69433061 69433162 -133652370 - L1M3b LINE L1 -5213 1068 968 24 0 0 0 chr5 69434135 69434159 -133651373 + AT_rich Low_complexity Low_complexity 1 24 0 329 309 39 55 chr5 69434867 69435048 -133650484 - L1ME3A LINE L1 -254 5916 5739 233 194 14 56 chr5 69435485 69435557 -133649975 + L1ME LINE L1 5759 5827 -294 292 323 93 43 chr5 69435705 69435866 -133649666 + MER5B DNA MER1_type 7 175 -3 2176 125 0 0 chr5 69435888 69436185 -133649347 + AluSq SINE Alu 1 297 -16 1965 180 186 18 chr5 69436257 69436929 -133648603 - LTR48 LTR ERV1 0 722 1 267 269 97 21 chr5 69436952 69437097 -133648435 + L1M4 LINE L1 4503 4658 -1488 192 297 76 92 chr5 69437807 69437953 -133647579 + L2 LINE L2 1242 1386 -1928 6324 203 9 3 chr5 69437953 69440071 -133645461 - L1PA15 LINE L1 -2 6163 4035 192 297 76 92 chr5 69440071 69440109 -133645423 + L2 LINE L2 1386 1423 -1891 2302 133 60 12 chr5 69440321 69440720 -133644812 - Tigger1 DNA MER2_type 0 2418 2001 279 108 0 0 chr5 69440718 69440755 -133644777 - Tigger1 DNA MER2_type -1339 1079 1043 * 225 229 229 0 chr5 69440855 69440938 -133644594 + L2 LINE L2 1967 2068 -1246 637 284 50 15 chr5 69440980 69441181 -133644351 + MER63A DNA MER1_type 1 208 -2 332 214 43 0 chr5 69441324 69441394 -133644138 + Tigger3(Golem) DNA MER2_type 70 142 -2887 * 455 62 31 0 chr5 69441391 69441456 -133644076 + Tigger3(Golem) DNA MER2_type 2772 2838 -191 251 224 81 31 chr5 69441958 69442119 -133643413 - L1ME LINE L1 -316 5805 5637 13622 88 7 5 chr5 69442387 69444329 -133641203 + L1P LINE L1 1582 3526 -2620 226 213 33 0 chr5 69444881 69444942 -133640590 - MER103 DNA DNA -59 107 45 191 271 153 51 chr5 69445930 69446048 -133639484 - MIR SINE MIR -63 145 16 854 68 17 0 chr5 69446429 69446546 -133638986 + L1PA7 LINE L1 6036 6154 0 190 311 0 0 chr5 69447219 69447293 -133638239 - MIR SINE MIR -44 218 145 23 33 0 0 chr5 69447336 69447366 -133638166 + AT_rich Low_complexity Low_complexity 1 30 0 225 290 71 27 chr5 69447610 69447793 -133637739 + LTR67 LTR ERVL 354 544 -13 483 276 23 63 chr5 69448124 69448298 -133637234 + MIR SINE MIR 22 188 -74 3188 151 20 60 chr5 69448448 69449261 -133636271 + L1P3 LINE L1 12 718 -5428 1425 101 0 86 chr5 69449361 69449476 -133636056 - Tigger1 DNA MER2_type -1407 1011 928 2321 100 6 0 chr5 69449476 69449787 -133635745 - AluSq SINE Alu 0 313 1 1425 101 0 86 chr5 69449787 69449928 -133635604 - Tigger1 DNA MER2_type -1490 928 777 * 2715 165 6 61 chr5 69449918 69450457 -133635075 - Tigger1 DNA MER2_type -1909 509 1 1078 243 61 67 chr5 69450808 69451253 -133634279 - L1ME3 LINE L1 -22 6140 5699 226 395 108 12 chr5 69451424 69451682 -133633850 - L2 LINE L2 -1961 1353 1071 1419 204 32 37 chr5 69451755 69451786 -133633746 + LTR37A LTR ERV1 19 49 -377 4922 156 37 5 chr5 69451786 69452624 -133632908 - MER6 DNA MER2_type 0 865 1 1419 204 32 37 chr5 69452624 69452998 -133632534 + LTR37A LTR ERV1 49 422 -4 1804 161 48 123 chr5 69453031 69453535 -133631997 + MER45B DNA AcHobo 567 1032 -8 431 130 0 11 chr5 69453645 69453737 -133631795 + (TCCC)n Simple_repeat Simple_repeat 4 94 0 2021 141 0 0 chr5 69453738 69454129 -133631403 - AluSq SINE Alu 0 391 1 1454 29 0 0 chr5 69454751 69454922 -133630610 - L1PA4 LINE L1 -8 6147 5977 447 316 107 5 chr5 69456416 69456612 -133628920 - MIR SINE MIR -33 229 14 306 224 15 0 chr5 69456619 69456686 -133628846 + MER116 DNA Mariner 13 80 0 426 290 21 0 chr5 69456745 69456890 -133628642 - LTR67 LTR ERVL -2 555 408 189 0 0 0 chr5 69457249 69457270 -133628262 + (T)n Simple_repeat Simple_repeat 1 21 0 564 226 176 39 chr5 69457431 69457635 -133627897 - L2 LINE L2 -253 3060 2829 954 221 33 5 chr5 69458177 69458390 -133627142 - MER20 DNA MER1_type 0 219 1 6167 70 10 1 chr5 69458900 69459712 -133625820 + L1P LINE L1 3632 4450 -1696 2324 102 0 30 chr5 69459712 69460071 -133625461 + L1PA6 LINE L1 5802 6151 -3 376 286 104 39 chr5 69461166 69461348 -133624184 - MIR SINE MIR -4 258 65 324 0 0 0 chr5 69461426 69461462 -133624070 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 33 25 0 0 chr5 69462940 69462980 -133622552 + AT_rich Low_complexity Low_complexity 1 40 0 454 317 30 35 chr5 69464357 69464476 -133621056 + MIR SINE MIR 62 181 -81 1185 242 134 48 chr5 69464476 69464955 -133620577 - MLT2B1 LTR ERVL 0 520 1 454 317 30 35 chr5 69464955 69465037 -133620495 + MIR SINE MIR 181 262 0 213 227 0 0 chr5 69465037 69465081 -133620451 + (CAT)n Simple_repeat Simple_repeat 2 45 0 362 333 23 35 chr5 69466986 69467160 -133618372 + MER5A DNA MER1_type 11 182 -7 1657 154 143 11 chr5 69467260 69467611 -133617921 + MLT2C2 LTR ERVL 28 424 -40 1779 137 26 121 chr5 69467660 69468041 -133617491 + MER7A DNA MER2_type 2 344 -2 555 81 0 0 chr5 69468045 69468131 -133617401 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 398 321 87 24 chr5 69468175 69468427 -133617105 - L3b LINE CR1 -214 1369 1102 191 68 0 85 chr5 69469063 69469122 -133616410 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2039 103 0 75 chr5 69470884 69471203 -133614329 - AluY SINE Alu -16 295 1 213 299 37 84 chr5 69471374 69471481 -133614051 - MIR SINE MIR -56 206 105 181 324 15 15 chr5 69472056 69472124 -133613408 + MIR3 SINE MIR 122 189 -19 439 250 0 0 chr5 69472420 69472504 -133613028 + MIR SINE MIR 8 91 -171 251 226 48 36 chr5 69472556 69472640 -133612892 + MER5B DNA MER1_type 24 108 -70 340 211 40 0 chr5 69472686 69472762 -133612770 - MER5A DNA MER1_type 0 189 111 279 342 202 0 chr5 69473378 69473492 -133612040 + MER5A DNA MER1_type 47 183 -6 201 74 0 0 chr5 69474095 69474122 -133611410 + (T)n Simple_repeat Simple_repeat 1 27 0 1726 213 20 36 chr5 69474594 69475035 -133610497 + MER92B LTR ERV1 156 589 -47 4042 137 37 10 chr5 69475049 69475751 -133609781 - L1MB2 LINE L1 -2 6169 5449 322 280 0 28 chr5 69475933 69476040 -133609492 - L1ME4a LINE L1 -27 6094 5991 239 167 2 55 chr5 69476858 69476915 -133608617 - MLT2C2 LTR ERVL 0 464 419 362 206 53 6 chr5 69476915 69477085 -133608447 + (TA)n Simple_repeat Simple_repeat 2 179 0 252 196 13 44 chr5 69477143 69477301 -133608231 + (TATATG)n Simple_repeat Simple_repeat 2 154 0 274 167 0 0 chr5 69477308 69477350 -133608182 - MLT2B2 LTR ERVL -71 444 403 1157 182 17 151 chr5 69479325 69479451 -133606081 + MLT1A2 LTR MaLR 1 142 -232 1787 142 75 160 chr5 69479451 69480119 -133605413 + LTR36 LTR ERV1 1 611 0 1157 182 17 151 chr5 69480119 69480409 -133605123 + MLT1A2 LTR MaLR 142 361 -13 296 250 13 0 chr5 69480832 69480908 -133604624 - MER116 DNA Mariner 0 80 4 1256 289 44 35 chr5 69480933 69481386 -133604146 + L2 LINE L2 2857 3313 0 350 301 46 51 chr5 69481911 69482107 -133603425 - L1MC4a LINE L1 -1557 6251 6057 257 249 37 0 chr5 69482426 69482535 -133602997 + L1MC4a LINE L1 7736 7808 0 29 0 0 0 chr5 69482839 69482868 -133602664 + AT_rich Low_complexity Low_complexity 1 29 0 2403 73 0 0 chr5 69482868 69483168 -133602364 + AluY SINE Alu 1 300 -11 1139 46 66 0 chr5 69483205 69483401 -133602131 + L1PA4 LINE L1 5977 6182 0 370 236 106 8 chr5 69483501 69483624 -133601908 + L2 LINE L2 3179 3313 0 312 195 13 26 chr5 69484929 69485006 -133600526 + LTR67 LTR ERVL 476 551 -6 1116 224 229 56 chr5 69485061 69485331 -133600201 - MLT1H LTR MaLR 0 549 327 2081 141 10 0 chr5 69485331 69485630 -133599902 + AluSx SINE Alu 1 302 -10 1116 224 229 56 chr5 69485630 69485652 -133599880 - MLT1H LTR MaLR -222 327 310 1952 167 15 57 chr5 69485652 69486059 -133599473 + MLT1B LTR MaLR 1 390 0 1116 224 229 56 chr5 69486059 69486233 -133599299 - MLT1H LTR MaLR -239 310 1 2006 139 7 0 chr5 69487489 69487783 -133597749 - AluSx SINE Alu -16 296 1 267 103 0 0 chr5 69488387 69488426 -133597106 + (CA)n Simple_repeat Simple_repeat 2 40 0 2026 98 39 72 chr5 69489215 69489603 -133595929 + THE1C LTR MaLR 1 375 0 1239 193 31 0 chr5 69489730 69489958 -133595574 + MER46A DNA MER2_type 1 235 -1 26 0 0 0 chr5 69490587 69490613 -133594919 + AT_rich Low_complexity Low_complexity 1 26 0 203 255 0 0 chr5 69492160 69492211 -133593321 + MIR SINE MIR 11 61 -201 180 320 115 0 chr5 69492615 69492693 -133592839 - L2 LINE L2 -50 3222 3136 745 233 57 16 chr5 69493073 69493266 -133592266 + MIR SINE MIR 59 259 -3 288 275 88 22 chr5 69493890 69493981 -133591551 + MIR SINE MIR 20 116 -92 2030 201 97 4 chr5 69494130 69494623 -133590909 - MER34 LTR ERV1 -3 539 1 641 130 9 5 chr5 69494815 69494926 -133590606 + MSTA LTR MaLR 2 100 -328 1216 103 22 0 chr5 69495033 69495218 -133590314 - THE1C LTR MaLR -186 189 1 203 246 18 35 chr5 69495740 69495797 -133589735 - L3 LINE CR1 -2 1575 1520 246 270 10 31 chr5 69496014 69496119 -133589413 + MIR SINE MIR 8 107 -102 390 324 18 40 chr5 69496142 69496367 -133589165 + LTR33 LTR ERVL 4 223 -298 262 278 0 22 chr5 69496480 69496570 -133588962 + LTR33 LTR ERVL 434 521 0 205 204 0 23 chr5 69496706 69496750 -133588782 + MIR3 SINE MIR 162 204 -4 22 56 0 0 chr5 69497451 69497487 -133588045 + AT_rich Low_complexity Low_complexity 1 36 0 7191 60 15 9 chr5 69498046 69499286 -133586246 - SVA Other Other -875 1381 214 282 130 0 0 chr5 69499570 69499616 -133585916 - MLT1I LTR MaLR -284 125 80 2274 58 6 42 chr5 69499621 69499933 -133585599 + AluY SINE Alu 1 301 -10 258 309 191 7 chr5 69500481 69500617 -133584915 + MIR SINE MIR 45 205 -57 378 286 11 0 chr5 69500625 69500716 -133584816 + MIR SINE MIR 1 92 -170 1915 209 30 13 chr5 69500729 69501188 -133584344 - MLT1C LTR MaLR 0 467 1 671 169 8 0 chr5 69501217 69501347 -133584185 - MLT1-int LTR MaLR -976 395 265 257 372 51 7 chr5 69501372 69501509 -133584023 + MIR SINE MIR 120 262 0 2416 170 37 0 chr5 69502982 69503412 -133582120 + MLT2B2 LTR ERVL 1 446 -69 207 0 0 0 chr5 69503419 69503442 -133582090 + (TA)n Simple_repeat Simple_repeat 1 23 0 489 115 0 0 chr5 69504081 69504159 -133581373 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 282 73 0 0 chr5 69504193 69504234 -133581298 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 2329 79 0 10 chr5 69504298 69504602 -133580930 - AluY SINE Alu -10 301 1 21 36 0 0 chr5 69510075 69510103 -133575429 + AT_rich Low_complexity Low_complexity 1 28 0 426 373 71 31 chr5 69510568 69510919 -133574613 + L2 LINE L2 2949 3313 0 28 0 0 0 chr5 69511010 69511038 -133574494 + AT_rich Low_complexity Low_complexity 1 28 0 229 363 89 13 chr5 69513550 69513705 -133571827 + MER5A DNA MER1_type 1 177 -12 2186 108 7 3 chr5 69513760 69514056 -133571476 + AluSq SINE Alu 2 298 -15 22 0 0 0 chr5 69514906 69514928 -133570604 + AT_rich Low_complexity Low_complexity 1 22 0 2184 112 0 10 chr5 69515279 69515591 -133569941 + AluSg SINE Alu 1 309 -1 2461 180 56 12 chr5 69516024 69516508 -133569024 + MLT1D LTR MaLR 1 505 0 1676 144 88 28 chr5 69519070 69519424 -133566108 + THE1C LTR MaLR 1 375 0 1072 124 6 6 chr5 69519426 69519604 -133565928 + THE1C-int LTR MaLR 3 180 -1400 * 5339 142 19 38 chr5 69519602 69520594 -133564938 + THE1C-int LTR MaLR 608 1580 0 1939 124 54 43 chr5 69520594 69520965 -133564567 + THE1C LTR MaLR 1 375 0 989 262 91 87 chr5 69522191 69523012 -133562520 + L1MEd LINE L1 555 1379 -5037 2313 78 0 3 chr5 69523069 69523362 -133562170 + AluY SINE Alu 1 292 -19 738 274 36 54 chr5 69523617 69524344 -133561188 + L1MEd LINE L1 2335 3045 -3381 366 290 100 24 chr5 69526487 69526660 -133558872 - MIR SINE MIR -43 219 36 22 35 0 0 chr5 69526918 69526947 -133558585 + AT_rich Low_complexity Low_complexity 1 29 0 385 309 64 0 chr5 69527654 69527764 -133557768 - L2 LINE L2 0 3272 3156 421 311 90 69 chr5 69527852 69528286 -133557246 - L2 LINE L2 -398 2916 2474 917 283 36 12 chr5 69528503 69528754 -133556778 + MIR SINE MIR 6 262 0 1264 195 34 73 chr5 69529153 69529214 -133556318 - MLT2C1 LTR ERVL -2 395 333 2045 130 7 3 chr5 69529214 69529506 -133556026 + AluSp SINE Alu 1 293 -20 1264 195 34 73 chr5 69529506 69529855 -133555677 - MLT2C1 LTR ERVL -64 333 1 35 33 0 17 chr5 69529979 69530015 -133555517 + AT_rich Low_complexity Low_complexity 1 37 -22 2032 57 4 4 chr5 69530015 69530263 -133555269 - AluY SINE Alu -29 282 35 35 33 0 17 chr5 69530263 69530286 -133555246 + AT_rich Low_complexity Low_complexity 37 59 0 353 278 72 56 chr5 69531292 69531472 -133554060 - MER5A DNA MER1_type 0 189 7 2191 105 3 0 chr5 69531483 69531769 -133553763 + AluSx SINE Alu 1 287 -25 24 41 0 20 chr5 69531769 69531781 -133553751 + AT_rich Low_complexity Low_complexity 1 12 -36 351 0 0 0 chr5 69531781 69531820 -133553712 + (TG)n Simple_repeat Simple_repeat 2 40 0 24 41 0 20 chr5 69531820 69531856 -133553676 + AT_rich Low_complexity Low_complexity 12 48 0 642 198 47 23 chr5 69532814 69532986 -133552546 + MLT1B LTR MaLR 72 247 -143 591 212 141 27 chr5 69533334 69533518 -133552014 - MER63A DNA MER1_type -1 209 5 242 222 16 32 chr5 69534140 69534203 -133551329 - MER5A DNA MER1_type 0 189 128 315 105 0 0 chr5 69534509 69534566 -133550966 + (TC)n Simple_repeat Simple_repeat 2 58 0 1215 402 5 16 chr5 69534896 69535279 -133550253 - MLT1B LTR MaLR 0 390 12 182 311 84 42 chr5 69535593 69535712 -133549820 + L2 LINE L2 2966 3089 -183 26 30 0 0 chr5 69536237 69536270 -133549262 + AT_rich Low_complexity Low_complexity 1 33 0 222 37 0 0 chr5 69538583 69538610 -133546922 + (T)n Simple_repeat Simple_repeat 1 27 0 1927 235 121 19 chr5 69540057 69540619 -133544913 - MLT1G LTR MaLR 0 590 5 964 158 16 0 chr5 69542849 69543033 -133542499 + L1MD3 LINE L1 7809 7995 0 289 281 11 0 chr5 69543030 69543119 -133542413 + HAL1 LINE L1 1553 1642 -865 * 906 286 155 31 chr5 69543126 69543628 -133541904 - L2 LINE L2 0 3313 2756 1614 207 39 25 chr5 69543679 69544370 -133541162 + L1ME2 LINE L1 5128 5892 -272 381 186 147 20 chr5 69544381 69544483 -133541049 + MLT1C LTR MaLR 1 115 -352 450 259 9 9 chr5 69544487 69544599 -133540933 + MLT1C-int LTR MaLR 776 887 -484 2175 188 35 80 chr5 69544678 69545193 -133540339 + MLT1C-int LTR MaLR 879 1370 -1 1487 217 71 38 chr5 69545194 69545646 -133539886 + MLT1C LTR MaLR 1 467 0 272 221 15 0 chr5 69545647 69545715 -133539817 + L1ME2 LINE L1 5908 5976 -188 593 211 14 7 chr5 69545796 69545943 -133539589 + L1MA10 LINE L1 6176 6323 -11 21 36 0 0 chr5 69547237 69547265 -133538267 + AT_rich Low_complexity Low_complexity 1 28 0 868 286 79 79 chr5 69547324 69548197 -133537335 - L1M4 LINE L1 -2188 3958 3086 262 328 0 0 chr5 69548271 69548396 -133537136 + T-rich Low_complexity Low_complexity 1 125 0 626 273 144 24 chr5 69548767 69549189 -133536343 + L1M4 LINE L1 3614 4086 -2060 395 296 90 58 chr5 69549287 69549852 -133535680 - HAL1b LINE L1 -717 631 49 1865 209 40 13 chr5 69550071 69550367 -133535165 - L1MC3 LINE L1 -15 7770 7456 1789 171 44 16 chr5 69550367 69550753 -133534779 + MLT2C1 LTR ERVL 1 397 0 1865 209 40 13 chr5 69550753 69550906 -133534626 - L1MC3 LINE L1 -329 7456 7309 675 133 0 44 chr5 69550907 69551020 -133534512 - Tigger7 DNA MER2_type 0 2487 2380 1849 202 27 3 chr5 69551022 69551359 -133534173 - Tigger7 DNA MER2_type -2142 345 1 826 208 66 33 chr5 69551441 69551653 -133533879 - L1MC3 LINE L1 -488 7297 7079 * 3424 239 35 10 chr5 69551652 69552612 -133532920 - L1M4 LINE L1 -743 5403 4420 27 49 0 0 chr5 69553049 69553090 -133532442 + AT_rich Low_complexity Low_complexity 1 41 0 939 275 8 56 chr5 69553180 69553540 -133531992 - L1MCb LINE L1 -5702 343 1 2567 276 78 21 chr5 69554592 69556678 -133528854 + L1ME3A LINE L1 3953 6159 -11 249 238 0 32 chr5 69556842 69556905 -133528627 - MER5A DNA MER1_type -1 188 128 206 42 42 104 chr5 69557198 69557294 -133528238 + (TTAAA)n Simple_repeat Simple_repeat 3 92 0 369 293 71 21 chr5 69557303 69557443 -133528089 + MIR SINE MIR 106 252 -10 673 246 15 0 chr5 69558848 69558982 -133526550 + MER5A DNA MER1_type 53 188 -1 626 339 11 18 chr5 69559156 69559430 -133526102 - L1MDa LINE L1 -6250 290 19 1179 285 76 60 chr5 69559446 69560078 -133525454 + Charlie2b DNA MER1_type 345 986 -1796 2534 211 39 26 chr5 69560089 69560630 -133524902 - MER77 LTR ERV1 -9 596 49 912 217 364 11 chr5 69560631 69561291 -133524241 + Charlie2 DNA MER1_type 1839 2731 -131 548 222 95 48 chr5 69561295 69561484 -133524048 + LTR40a LTR ERVL 1 198 -321 294 296 116 49 chr5 69561513 69561797 -133523735 + LTR40a LTR ERVL 118 420 -42 308 243 43 0 chr5 69561919 69561989 -133523543 + L2 LINE L2 3241 3313 0 442 368 60 42 chr5 69562132 69562415 -133523117 - L2 LINE L2 0 3272 2985 2832 84 23 8 chr5 69563187 69563579 -133521953 + MLT2A1 LTR ERVL 3 400 -44 231 143 0 0 chr5 69563929 69563964 -133521568 - MLT2A1 LTR ERVL 0 444 410 * 345 87 0 0 chr5 69563963 69564009 -133521523 + MLT2A1 LTR ERVL 408 453 0 189 284 95 0 chr5 69564419 69564493 -133521039 + L2 LINE L2 3147 3227 -86 1776 110 19 87 chr5 69564509 69564847 -133520685 - AluSc SINE Alu 0 309 1 23 33 0 0 chr5 69566414 69566444 -133519088 + AT_rich Low_complexity Low_complexity 1 30 0 5840 181 39 17 chr5 69566614 69568577 -133516955 - L1MC2 LINE L1 -19 6325 4318 1756 194 19 19 chr5 69569144 69569509 -133516023 - MLT1A1 LTR MaLR 0 365 1 1206 171 0 0 chr5 69569682 69569904 -133515628 + L1PA14 LINE L1 5940 6161 0 3890 80 11 0 chr5 69571533 69572071 -133513461 - L1PA13 LINE L1 -2 6161 5618 21 71 0 0 chr5 69572617 69572659 -133512873 + AT_rich Low_complexity Low_complexity 1 42 0 546 269 65 5 chr5 69572927 69573113 -133512419 - MIR SINE MIR -1 261 65 209 266 147 46 chr5 69573134 69573243 -133512289 - MIR SINE MIR -123 139 20 632 348 60 23 chr5 69574030 69574461 -133511071 + L2 LINE L2 2293 2739 -575 346 276 68 61 chr5 69574954 69575117 -133510415 - MIR SINE MIR -63 199 36 201 265 82 0 chr5 69575609 69575658 -133509874 + L2 LINE L2 1849 1901 -1413 516 326 30 48 chr5 69576224 69576256 -133509276 - MIR SINE MIR -30 232 201 1404 263 100 40 chr5 69576256 69576774 -133508758 + MLT1H LTR MaLR 1 549 0 516 326 30 48 chr5 69576774 69576971 -133508561 - MIR SINE MIR -61 201 7 239 341 35 0 chr5 69577039 69577124 -133508408 - MIR3 SINE MIR -42 166 79 202 284 27 68 chr5 69577236 69577310 -133508222 + L2 LINE L2 3199 3269 -3 202 216 20 0 chr5 69578728 69578779 -133506753 + (TG)n Simple_repeat Simple_repeat 1 52 0 635 247 47 94 chr5 69579206 69579481 -133506051 - MLT1F1 LTR MaLR -235 332 71 308 345 166 11 chr5 69579830 69580277 -133505255 + L1MC/D LINE L1 3633 4148 -1998 713 330 123 32 chr5 69580546 69581520 -133504012 + L1MC/D LINE L1 4490 5547 -695 305 193 57 57 chr5 69581583 69581671 -133503861 - L1MC4 LINE L1 -1339 6703 6616 373 250 125 0 chr5 69581790 69581886 -133503646 + L2 LINE L2 3201 3308 -5 21 57 0 0 chr5 69582550 69582585 -133502947 + AT_rich Low_complexity Low_complexity 1 35 0 1968 113 56 0 chr5 69582645 69582929 -133502603 + AluSc SINE Alu 1 300 -9 2681 7 0 0 chr5 69583544 69583834 -133501698 + AluY SINE Alu 20 309 -2 267 106 106 0 chr5 69583922 69583969 -133501563 - MADE1 DNA Mariner 0 80 29 318 316 0 0 chr5 69584084 69584160 -133501372 + L3 LINE CR1 1393 1468 -109 275 81 0 0 chr5 69584228 69584265 -133501267 - MADE1 DNA Mariner -43 37 1 426 195 0 12 chr5 69584370 69584452 -133501080 - L1PA12 LINE L1 -5803 1778 1698 5602 210 60 11 chr5 69584495 69585688 -133499844 - L1PA12 LINE L1 -6327 1254 4 217 326 42 21 chr5 69585690 69585785 -133499747 + L3b LINE CR1 1162 1258 -325 803 265 92 34 chr5 69585785 69586079 -133499453 + MER46C DNA MER2_type 5 315 -23 392 299 129 34 chr5 69587560 69587854 -133497678 - L1MC4 LINE L1 -1905 5903 5582 252 267 37 22 chr5 69588084 69588219 -133497313 + (CATATA)n Simple_repeat Simple_repeat 2 138 0 1369 125 5 5 chr5 69588461 69588661 -133496871 + AluSx SINE Alu 1 200 -112 1935 148 0 0 chr5 69588663 69589003 -133496529 + AluSx SINE Alu 1 340 0 275 332 157 16 chr5 69589004 69589450 -133496082 - L2 LINE L2 -1667 1647 1139 452 305 51 39 chr5 69589504 69589760 -133495772 + MLT1G LTR MaLR 22 280 -310 227 195 0 0 chr5 69591100 69591141 -133494391 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 272 195 150 53 chr5 69591319 69591432 -133494100 + MIR SINE MIR 126 249 -13 29 47 0 0 chr5 69592760 69592803 -133492729 + AT_rich Low_complexity Low_complexity 1 43 0 1586 172 154 37 chr5 69593078 69593461 -133492071 + MSTA LTR MaLR 1 428 0 7697 136 30 54 chr5 69593463 69594841 -133490691 + MSTA-int LTR MaLR 3 1347 -233 1802 178 131 11 chr5 69594872 69595254 -133490278 + MSTA LTR MaLR 1 428 0 203 105 53 0 chr5 69595691 69595729 -133489803 + CT-rich Low_complexity Low_complexity 5 44 0 2634 149 22 0 chr5 69595761 69596178 -133489354 - MSTB LTR MaLR 0 426 1 414 0 0 0 chr5 69596351 69596397 -133489135 + (CA)n Simple_repeat Simple_repeat 2 47 0 463 339 60 28 chr5 69596464 69596712 -133488820 - L1MC4 LINE L1 -2279 5529 5274 2155 109 3 0 chr5 69598526 69598861 -133486671 - AluSq SINE Alu 0 337 2 358 342 22 33 chr5 69600153 69600337 -133485195 + MLT1J1 LTR MaLR 190 371 -75 376 304 177 50 chr5 69600372 69600734 -133484798 + MLT1J2 LTR MaLR 36 443 -7 220 219 0 0 chr5 69600851 69600892 -133484640 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 2323 144 90 0 chr5 69600892 69601282 -133484250 - MSTB LTR MaLR -1 425 1 436 311 12 0 chr5 69601570 69601734 -133483798 + L1PB3 LINE L1 -658 4294966803 -6697 5740 195 37 18 chr5 69601753 69603896 -133481636 + L1PB3 LINE L1 1 1494 -4710 268 111 0 0 chr5 69603896 69603941 -133481591 + AluSc SINE Alu 254 298 -1 858 208 17 0 chr5 69603944 69604117 -133481415 + L1PB3 LINE L1 3575 3750 -2453 2960 52 1 23 chr5 69604118 69604521 -133481011 + MER11C LTR ERVK 1 457 -614 7813 175 39 15 chr5 69604521 69606109 -133479423 + L1PB3 LINE L1 3751 5299 -912 189 0 0 0 chr5 69606109 69606130 -133479402 + (CAA)n Simple_repeat Simple_repeat 2 22 0 7813 175 39 15 chr5 69606130 69606246 -133479286 + L1PB3 LINE L1 5299 5411 -800 2151 100 35 0 chr5 69606246 69606536 -133478996 - AluSx SINE Alu -11 301 2 7813 175 39 15 chr5 69606536 69607238 -133478294 + L1PB3 LINE L1 5411 6208 -3 1145 56 0 0 chr5 69607848 69607992 -133477540 - L1PA5 LINE L1 -8 6146 6003 860 208 36 184 chr5 69608303 69608826 -133476706 + L1M4 LINE L1 609 1054 -5488 * 1269 235 169 23 chr5 69608825 69609263 -133476269 + L1MD2 LINE L1 5856 6357 -2 292 276 23 70 chr5 69609419 69609676 -133475856 - L1MEc LINE L1 -1941 4485 4241 271 184 13 79 chr5 69611930 69612006 -133473526 - L1MC4 LINE L1 -325 7548 7413 2794 158 20 8 chr5 69612013 69612519 -133473013 - L1MA5 LINE L1 0 6300 5789 1663 195 54 19 chr5 69613107 69613476 -133472056 - MLT1B LTR MaLR 0 390 9 202 211 0 0 chr5 69614570 69614608 -133470924 + (TG)n Simple_repeat Simple_repeat 2 39 0 265 319 0 0 chr5 69614610 69614679 -133470853 + MER5B DNA MER1_type 60 128 -50 950 198 16 5 chr5 69614964 69615151 -133470381 - MER5A DNA MER1_type 0 189 1 416 329 35 24 chr5 69615930 69616185 -133469347 - L1MEc LINE L1 -2659 3767 3510 267 337 16 4 chr5 69616188 69616437 -133469095 - L1MEc LINE L1 -3228 3198 2947 231 271 14 0 chr5 69616579 69616649 -133468883 - L1MEc LINE L1 -3610 2816 2746 3591 149 43 29 chr5 69617653 69618322 -133467210 + MER67C LTR ERV1 1 682 -28 2161 119 0 19 chr5 69618322 69618640 -133466892 - AluSx SINE Alu 0 312 1 3591 149 43 29 chr5 69618640 69618670 -133466862 + MER67C LTR ERV1 682 710 0 206 327 106 19 chr5 69618722 69618826 -133466706 - MIR SINE MIR -71 137 25 526 354 14 21 chr5 69620321 69620601 -133464931 - LTR16C LTR ERVL -1 490 213 953 172 45 7 chr5 69620601 69620812 -133464720 - MLT1D LTR MaLR 0 505 322 438 289 12 77 chr5 69620812 69621058 -133464474 - L1MEc LINE L1 -4532 1995 1665 2043 252 75 38 chr5 69621212 69621983 -133463549 - L1MEc LINE L1 -5235 1181 382 353 344 40 97 chr5 69622279 69622753 -133462779 - L2 LINE L2 0 3272 2826 471 322 99 5 chr5 69622804 69623015 -133462517 + LTR33 LTR ERVL 54 284 -237 1060 264 25 28 chr5 69623085 69623641 -133461891 - MLT2E LTR ERVL -17 611 3 1786 157 45 12 chr5 69624031 69624368 -133461164 + MER7A DNA MER2_type 1 346 0 195 186 0 0 chr5 69624411 69624454 -133461078 + GA-rich Low_complexity Low_complexity 1 43 0 237 65 0 0 chr5 69628339 69628370 -133457162 + (T)n Simple_repeat Simple_repeat 1 31 0 254 272 37 37 chr5 69628956 69629037 -133456495 - MIR SINE MIR -122 140 60 182 250 0 54 chr5 69629281 69629337 -133456195 + L2 LINE L2 3251 3303 -10 23 0 0 0 chr5 69630619 69630642 -133454890 + AT_rich Low_complexity Low_complexity 1 23 0 195 195 0 49 chr5 69631030 69631071 -133454461 - L2 LINE L2 -95 3218 3180 195 100 0 0 chr5 69631178 69631208 -133454324 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 274 288 0 0 chr5 69631935 69632008 -133453524 + L1ME LINE L1 5793 5865 -305 * 1452 283 111 51 chr5 69631999 69633224 -133452308 - HAL1 LINE L1 -1166 1341 43 182 358 158 0 chr5 69634301 69634396 -133451136 + L2 LINE L2 3162 3271 -1 2160 156 28 48 chr5 69635210 69635705 -133449827 - MER31A LTR ERV1 0 485 1 1305 227 33 10 chr5 69635729 69636029 -133449503 - MER31A-int LTR ERV1 -65 4871 4565 3283 166 88 123 chr5 69636061 69637106 -133448426 - MER31B-int LTR ERV1 -371 4565 3603 1492 229 55 15 chr5 69637115 69637590 -133447942 - MER31B-int LTR ERV1 -1694 3242 2749 1554 201 91 89 chr5 69637662 69638490 -133447042 - MER31B-int LTR ERV1 -2409 2527 1699 3702 40 15 0 chr5 69638508 69638524 -133447008 + L1P LINE L1 4845 4859 -1287 3581 41 2 5 chr5 69638524 69638966 -133446566 - L1PA5 LINE L1 0 6154 5714 3702 40 15 0 chr5 69638966 69639424 -133446108 + L1P LINE L1 4859 5326 -820 5083 185 75 81 chr5 69639483 69640926 -133444606 - MER31B-int LTR ERV1 -3487 1449 15 1992 202 2 63 chr5 69640975 69641470 -133444062 - MER31B LTR ERV1 -1 465 1 214 200 40 13 chr5 69641533 69641608 -133443924 + (TTA)n Simple_repeat Simple_repeat 2 78 0 2206 89 82 146 chr5 69643680 69644004 -133441528 - L1PB1 LINE L1 0 6151 5865 324 0 0 0 chr5 69644004 69644040 -133441492 + (TG)n Simple_repeat Simple_repeat 2 37 0 2206 89 82 146 chr5 69644040 69644188 -133441344 - L1PB1 LINE L1 -286 5865 5709 * 2229 217 46 8 chr5 69644185 69645068 -133440464 - L1MB7 LINE L1 -318 6677 5759 2263 267 37 3 chr5 69645181 69646069 -133439463 - L1MB7 LINE L1 -2967 3990 3073 * 5224 210 39 24 chr5 69646065 69648290 -133437242 + L1MB8 LINE L1 3921 6177 -1 766 262 75 92 chr5 69648289 69649017 -133436515 - L1MB7 LINE L1 -5309 1546 831 * 347 232 36 18 chr5 69649237 69649376 -133436156 - L1MB7 LINE L1 -6356 499 93 268 284 181 9 chr5 69649905 69650021 -133435511 + L2 LINE L2 3136 3271 -1 187 356 58 0 chr5 69650908 69650995 -133434537 + MIR SINE MIR 66 157 -105 218 154 13 90 chr5 69651570 69651648 -133433884 + (ATTAG)n Simple_repeat Simple_repeat 4 75 0 269 215 0 15 chr5 69651679 69651744 -133433788 - MLT1H LTR MaLR -6 543 480 5956 194 55 8 chr5 69651752 69652189 -133433343 + L1M3f LINE L1 10 425 -4903 2426 50 0 0 chr5 69652189 69652544 -133432988 - AluY SINE Alu 0 355 1 5956 194 55 8 chr5 69652544 69653241 -133432291 + L1M3f LINE L1 425 1200 -4128 2443 189 27 14 chr5 69653558 69654149 -133431383 + L1M3f LINE L1 3145 3743 -2585 680 210 151 73 chr5 69655599 69655707 -133429825 + MER58A DNA MER1_type 1 99 -2321 2812 183 119 20 chr5 69655707 69656418 -133429114 + LTR48 LTR ERV1 4 785 -2 680 210 151 73 chr5 69656418 69656514 -133429018 + MER58A DNA MER1_type 99 221 -3 1000 294 53 24 chr5 69657502 69657880 -133427652 + LTR16C LTR ERVL 98 486 -5 233 345 193 0 chr5 69657969 69658140 -133427392 - L2 LINE L2 -531 2783 2580 1776 143 0 0 chr5 69660777 69661042 -133424490 + AluSx SINE Alu 32 296 -16 23 54 0 0 chr5 69661369 69661406 -133424126 + AT_rich Low_complexity Low_complexity 1 37 0 388 252 35 28 chr5 69661497 69661640 -133423892 + MIR SINE MIR 118 261 -1 188 384 80 21 chr5 69662032 69662321 -133423211 - L2 LINE L2 -155 3117 2812 721 283 88 78 chr5 69662641 69663041 -133422491 + L2 LINE L2 2905 3308 -5 2768 200 112 13 chr5 69663093 69663809 -133421723 + LTR48 LTR ERV1 1 787 0 4104 108 77 9 chr5 69663901 69664548 -133420984 + LTR8 LTR ERV1 1 691 0 21 0 0 0 chr5 69665029 69665050 -133420482 + AT_rich Low_complexity Low_complexity 1 21 0 1878 203 9 26 chr5 69665485 69665908 -133419624 + L1MB7 LINE L1 5752 6167 -17 1621 149 83 31 chr5 69665991 69666280 -133419252 - AluSx SINE Alu -8 304 1 360 257 20 53 chr5 69666306 69666441 -133419091 - L1MEc LINE L1 -3619 3322 3191 2082 120 10 10 chr5 69666441 69666740 -133418792 - AluSx SINE Alu -13 299 1 360 257 20 53 chr5 69666740 69666756 -133418776 - L1MEc LINE L1 -3750 3191 3176 227 235 35 24 chr5 69666755 69666840 -133418692 + L1MDa LINE L1 1663 1748 -4792 * 479 224 128 36 chr5 69666862 69667081 -133418451 - L1MEc LINE L1 -3732 3209 2971 486 263 119 17 chr5 69667090 69667107 -133418425 - L1MEc LINE L1 -4080 3042 3028 1893 148 7 0 chr5 69667107 69667391 -133418141 - AluSx SINE Alu -25 287 2 486 263 119 17 chr5 69667391 69667609 -133417923 - L1MEc LINE L1 -4094 3028 2783 305 247 37 0 chr5 69667629 69667710 -133417822 - L1MEc LINE L1 -4552 2570 2487 657 232 32 68 chr5 69667732 69667796 -133417736 + MER58A DNA MER1_type 42 107 -2313 1616 199 42 20 chr5 69667796 69668152 -133417380 + MLT1A1 LTR MaLR 2 365 0 657 232 32 68 chr5 69668152 69668277 -133417255 + MER58A DNA MER1_type 107 224 0 654 299 46 28 chr5 69668591 69668915 -133416617 - L1MEc LINE L1 -5999 424 95 270 281 73 0 chr5 69669068 69669150 -133416382 + L1MCc LINE L1 337 424 -5999 271 247 174 21 chr5 69669352 69669542 -133415990 - L1MEc LINE L1 -5094 1302 1084 3444 147 8 39 chr5 69669633 69669990 -133415542 + MER7C DNA MER2_type 2 334 -2694 2246 110 0 16 chr5 69669990 69670300 -133415232 - AluSq SINE Alu -8 305 1 3444 147 8 39 chr5 69670300 69670562 -133414970 + MER7C DNA MER2_type 334 602 0 913 237 52 87 chr5 69670569 69670984 -133414548 - L1ME1 LINE L1 0 6334 5797 831 291 101 67 chr5 69670976 69671871 -133413661 - L1MEc LINE L1 -5450 946 22 * 709 304 140 25 chr5 69671857 69672914 -133412618 - L1ME1 LINE L1 -956 5190 4013 * 300 270 10 0 chr5 69672919 69673019 -133412513 - L1ME3A LINE L1 -8 6162 6062 820 290 91 17 chr5 69673072 69673544 -133411988 - L1M4 LINE L1 -1095 5287 4781 2857 163 28 15 chr5 69673546 69674454 -133411078 - L1P4 LINE L1 -441 5725 4812 308 219 9 88 chr5 69674458 69674572 -133410960 - L1M4 LINE L1 -1896 4486 4382 511 285 166 0 chr5 69674582 69674901 -133410631 - L1M4 LINE L1 -1959 4423 4052 231 289 110 29 chr5 69674964 69675210 -133410322 - L1MDb LINE L1 -4959 1449 1184 312 296 72 13 chr5 69675216 69675368 -133410164 - L1MDb LINE L1 -5124 1285 1125 264 91 0 0 chr5 69676085 69676129 -133409403 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr5 69676129 69676160 -133409372 + (TG)n Simple_repeat Simple_repeat 2 32 0 13351 135 68 14 chr5 69676162 69677597 -133407935 - Tigger1 DNA MER2_type -1 2417 809 1955 122 11 0 chr5 69677597 69677867 -133407665 + AluSx SINE Alu 1 273 -39 13351 135 68 14 chr5 69677867 69678723 -133406809 - Tigger1 DNA MER2_type -1609 809 1 7222 228 21 23 chr5 69680052 69681648 -133403884 - L1PA12 LINE L1 -3702 3882 2283 2114 152 22 17 chr5 69681648 69682010 -133403522 - THE1B LTR MaLR 0 364 1 7222 228 21 23 chr5 69682010 69683206 -133402326 - L1PA12 LINE L1 -5301 2283 7 333 330 18 18 chr5 69683237 69683346 -133402186 - L1ME LINE L1 -523 5647 5539 979 107 0 0 chr5 69683442 69683573 -133401959 + AluSc SINE Alu 174 304 -5 291 283 49 28 chr5 69683898 69684222 -133401310 - L1ME LINE L1 -744 5402 5102 23 0 0 0 chr5 69684360 69684383 -133401149 + AT_rich Low_complexity Low_complexity 1 23 0 237 95 0 0 chr5 69684435 69684477 -133401055 + LTR66 LTR ERVL 398 439 -171 1785 115 0 12 chr5 69684480 69684723 -133400809 - AluSc SINE Alu -17 292 53 428 279 94 31 chr5 69684739 69685123 -133400409 - L1ME LINE L1 -2340 3806 3399 1150 167 55 172 chr5 69685485 69685717 -133399815 - MLT1A2 LTR MaLR 0 374 211 10165 39 4 4 chr5 69685717 69687730 -133397802 - L1PA4 LINE L1 0 6155 4132 1150 167 55 172 chr5 69687730 69687916 -133397616 - MLT1A2 LTR MaLR -163 211 5 3387 189 41 41 chr5 69687919 69688419 -133397113 - L1MB7 LINE L1 -7 6177 5675 1992 127 6 16 chr5 69688419 69688734 -133396798 - AluSx SINE Alu 0 312 1 3387 189 41 41 chr5 69688734 69689007 -133396525 - L1MB7 LINE L1 -508 5676 5404 26 50 0 0 chr5 69689008 69689048 -133396484 + AT_rich Low_complexity Low_complexity 1 40 0 542 145 0 0 chr5 69690399 69690482 -133395050 - MER72 LTR ERV1 -6 716 634 182 128 26 0 chr5 69690533 69690572 -133394960 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4721 66 0 5 chr5 69690579 69691186 -133394346 - L1PA6 LINE L1 -6 6148 5545 4242 158 0 9 chr5 69691186 69691840 -133393692 - MER72 LTR ERV1 -74 648 1 843 312 91 7 chr5 69693504 69693921 -133391611 + LTR33 LTR ERVL 1 452 -69 2202 149 82 16 chr5 69694229 69694658 -133390874 + MSTB2 LTR MaLR 1 457 0 184 270 16 48 chr5 69694929 69694992 -133390540 - L3 LINE CR1 -98 1479 1419 318 122 0 0 chr5 69695321 69695370 -133390162 - MSTB2 LTR MaLR -1 456 408 426 179 0 0 chr5 69696657 69696741 -133388791 - L1MEd LINE L1 -5946 173 90 512 307 33 14 chr5 69696744 69696959 -133388573 + L1MCc LINE L1 11 229 -6194 1721 246 164 31 chr5 69697011 69698440 -133387092 - L1MD3 LINE L1 -10 7985 6265 2767 228 38 59 chr5 69698608 69699634 -133385898 - L1MC4a LINE L1 -757 5389 5215 493 225 35 18 chr5 69699705 69699874 -133385658 - L1MC4a LINE L1 -1671 6137 5966 818 309 68 41 chr5 69699960 69700908 -133384624 - L1MC4a LINE L1 -1039 5107 4138 315 245 53 0 chr5 69701047 69701141 -133384391 + L1ME4a LINE L1 5716 5814 -307 2449 189 2 51 chr5 69701242 69701730 -133383802 + MLT2B2 LTR ERVL 6 469 -46 228 67 0 0 chr5 69701749 69701779 -133383753 + (TG)n Simple_repeat Simple_repeat 1 30 0 372 65 0 0 chr5 69701815 69701861 -133383671 + Ricksha DNA DNA 861 906 -2340 304 287 46 0 chr5 69701900 69702008 -133383524 - MER103 DNA DNA -51 115 3 324 319 95 15 chr5 69702092 69702355 -133383177 + L1ME4a LINE L1 5834 6117 -4 710 304 16 5 chr5 69703231 69703425 -133382107 - MIR SINE MIR -17 245 50 318 330 85 67 chr5 69704460 69704742 -133380790 - MLT1K LTR MaLR -125 463 177 499 282 43 31 chr5 69705005 69705168 -133380364 + MIR SINE MIR 49 213 -49 1532 273 63 16 chr5 69706114 69706672 -133378860 + MLT1E LTR MaLR 2 587 -6 527 276 55 11 chr5 69707194 69707375 -133378157 - MIR SINE MIR 0 262 74 369 98 0 0 chr5 69707424 69707475 -133378057 + MADE1 DNA Mariner 1 51 -29 361 265 12 0 chr5 69707475 69707558 -133377974 - MIR SINE MIR -62 200 117 194 333 102 11 chr5 69707821 69708007 -133377525 + L2 LINE L2 2840 3042 -230 473 229 134 45 chr5 69708459 69708660 -133376872 - L2 LINE L2 -85 3228 3010 234 179 0 0 chr5 69708877 69708916 -133376616 + MLT1B LTR MaLR 1 39 -351 183 156 0 0 chr5 69708916 69708948 -133376584 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 326 371 117 10 chr5 69709258 69709651 -133375881 + L2 LINE L2 1666 2100 -1214 21 0 0 0 chr5 69710029 69710050 -133375482 + AT_rich Low_complexity Low_complexity 1 21 0 423 200 20 10 chr5 69710661 69710761 -133374771 - MLT1C LTR MaLR -10 457 357 770 342 79 42 chr5 69711051 69711888 -133373644 + L2 LINE L2 2127 3058 -214 205 239 0 22 chr5 69712234 69712280 -133373252 + MER91 DNA MER1_type 69 113 -83 30 0 0 0 chr5 69712732 69712762 -133372770 + AT_rich Low_complexity Low_complexity 1 30 0 4849 173 47 9 chr5 69712769 69713944 -133371588 - L1PA16 LINE L1 -26 6140 4918 213 39 0 0 chr5 69714444 69714470 -133371062 + (TG)n Simple_repeat Simple_repeat 1 26 0 197 348 109 11 chr5 69716698 69716790 -133368742 + MIR SINE MIR 48 148 -60 275 323 25 38 chr5 69717315 69717473 -133368059 + MLT1J LTR MaLR 342 497 -14 1922 236 56 16 chr5 69717481 69717980 -133367552 + LTR40a LTR ERVL 1 519 0 204 194 0 0 chr5 69718431 69718467 -133367065 + (ATG)n Simple_repeat Simple_repeat 1 36 0 2212 90 7 3 chr5 69718621 69718922 -133366610 + AluY SINE Alu 2 303 -8 1992 164 18 62 chr5 69718965 69719404 -133366128 + L1MC1 LINE L1 5897 6316 -17 346 278 9 120 chr5 69719651 69719867 -133365665 - L1MEd LINE L1 -5067 1052 861 24 32 0 0 chr5 69719951 69719982 -133365550 + AT_rich Low_complexity Low_complexity 1 31 0 364 329 121 0 chr5 69719999 69720139 -133365393 - MIR3 SINE MIR -19 189 33 233 253 0 99 chr5 69720450 69720541 -133364991 + L2 LINE L2 3228 3309 -4 313 294 83 50 chr5 69720680 69720860 -133364672 + MER117 DNA MER1_type 5 190 -7 319 220 34 93 chr5 69721508 69721626 -133363906 + L2 LINE L2 3203 3313 0 255 358 21 0 chr5 69722375 69722470 -133363062 - MIR3 SINE MIR -17 191 95 190 304 0 0 chr5 69724340 69724396 -133361136 - MIR SINE MIR -121 141 86 270 308 110 22 chr5 69724545 69724727 -133360805 - L2 LINE L2 -1 3312 3115 2810 96 33 2 chr5 69725090 69725516 -133360016 + L1PA14 LINE L1 5720 6158 -3 679 285 29 18 chr5 69725950 69726227 -133359305 + L1ME LINE L1 5506 5785 -336 198 264 116 41 chr5 69727344 69727465 -133358067 + L2 LINE L2 3113 3242 -71 931 127 0 0 chr5 69727681 69727815 -133357717 - THE1B LTR MaLR -166 198 65 308 193 0 0 chr5 69728298 69728355 -133357177 - MLT2B1 LTR ERVL 0 520 464 216 200 0 0 chr5 69728357 69728402 -133357130 + (TATG)n Simple_repeat Simple_repeat 2 46 0 613 222 10 9 chr5 69728528 69728679 -133356853 - MLT2B1 LTR ERVL -48 464 220 7728 21 1 0 chr5 69728691 69729599 -133355933 - L1PA3 LINE L1 -1435 4711 3803 7379 19 14 0 chr5 69729599 69731046 -133354486 + L1PA3 LINE L1 4689 6147 -8 1096 196 14 0 chr5 69731071 69731291 -133354241 - MLT2B1 LTR ERVL -295 225 3 361 330 37 11 chr5 69731911 69732099 -133353433 + MARNA DNA Mariner 283 475 -111 232 179 48 107 chr5 69732969 69732992 -133352540 + MLT1L LTR MaLR 358 381 -234 3307 162 60 28 chr5 69732992 69733442 -133352090 + MER67C LTR ERV1 3 484 -226 2831 7 0 0 chr5 69733442 69733752 -133351780 - AluYb8 SINE Alu -8 310 1 3307 162 60 28 chr5 69733752 69733987 -133351545 + MER67C LTR ERV1 484 710 0 232 179 48 107 chr5 69733987 69734047 -133351485 + MLT1L LTR MaLR 381 436 -179 189 330 82 10 chr5 69734214 69734311 -133351221 - MER5C DNA MER1_type -219 105 2 1833 159 0 0 chr5 69734341 69734618 -133350914 - AluSx SINE Alu -13 299 23 308 335 52 21 chr5 69734636 69734830 -133350702 - L1MC/D LINE L1 -1991 5817 5618 23 0 0 0 chr5 69736005 69736028 -133349504 + AT_rich Low_complexity Low_complexity 1 23 0 819 196 80 18 chr5 69736163 69736326 -133349206 + MER5A DNA MER1_type 17 189 0 5699 178 10 20 chr5 69736349 69738470 -133347062 - L1PA16 LINE L1 -1 6165 4068 4323 76 0 0 chr5 69738475 69739040 -133346492 - L1P LINE L1 -1856 4290 3726 2346 83 0 6 chr5 69739039 69739364 -133346168 + L1P LINE L1 1908 2230 -3916 * 3655 215 58 54 chr5 69739360 69740577 -133344955 - L1 LINE L1 -2152 3994 2774 274 317 45 9 chr5 69740588 69740733 -133344799 - MIR3 SINE MIR -73 135 3 3623 169 35 6 chr5 69741702 69742369 -133343163 + Tigger2 DNA MER2_type 1 686 -2032 24 0 0 0 chr5 69792433 69792457 -133293075 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 69792601 69792624 -133292908 + (CA)n Simple_repeat Simple_repeat 2 24 0 12632 98 5 9 chr5 69794723 69797362 -133288170 - L1PA8 LINE L1 -13 6159 3528 373 315 41 68 chr5 69798385 69798779 -133286753 + L1MEd LINE L1 3 385 -5734 216 0 0 0 chr5 69798845 69798869 -133286663 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 829 304 35 8 chr5 69799067 69799324 -133286208 - MLT2E LTR ERVL -354 274 11 226 260 28 72 chr5 69799418 69799599 -133285933 + MER69 DNA AcHobo 1199 1371 -1155 21 0 0 0 chr5 69799758 69799779 -133285753 + AT_rich Low_complexity Low_complexity 1 21 0 806 261 72 37 chr5 69799803 69800236 -133285296 + MER69 DNA AcHobo 1887 2334 -192 638 354 162 5 chr5 69800337 69800707 -133284825 - Zaphod DNA AcHobo -3511 520 93 2028 178 88 16 chr5 69800746 69801178 -133284354 - MLT1C LTR MaLR 0 467 5 1572 216 41 9 chr5 69801550 69801892 -133283640 - ERVL LTR ERVL -1262 4502 4150 385 261 30 37 chr5 69801921 69802055 -133283477 - MLT2F LTR ERVL -529 134 2 7472 27 3 0 chr5 69802201 69803729 -133281803 + L1PA4 LINE L1 4615 6147 -8 3568 257 53 28 chr5 69803743 69804225 -133281307 - L1MCb LINE L1 -3268 3296 2828 1925 146 20 38 chr5 69804225 69804568 -133280964 + MER1B DNA MER1_type 1 337 0 3568 257 53 28 chr5 69804568 69806959 -133278573 - L1MCb LINE L1 -3736 2828 205 189 0 0 0 chr5 69807710 69807731 -133277801 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 312 306 119 68 chr5 69807797 69808235 -133277297 + HAL1b LINE L1 248 707 -641 222 230 48 119 chr5 69808301 69808427 -133277105 - MER5A DNA MER1_type -71 118 2 * 350 344 7 92 chr5 69808427 69808707 -133276825 + L2 LINE L2 2177 2432 -882 236 246 111 32 chr5 69809011 69809137 -133276395 - L1M4 LINE L1 -2196 3950 3815 204 163 0 0 chr5 69809244 69809287 -133276245 + (CA)n Simple_repeat Simple_repeat 2 44 0 844 261 54 48 chr5 69809296 69809668 -133275864 + HAL1b LINE L1 406 779 -569 686 224 26 116 chr5 69810794 69811174 -133274358 - L1MC4 LINE L1 -5 8037 7692 * 3147 196 15 49 chr5 69811153 69811259 -133274273 - L1 LINE L1 -880 5266 5158 1840 144 7 4 chr5 69811259 69811536 -133273996 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr5 69811536 69811570 -133273962 + (CA)n Simple_repeat Simple_repeat 2 35 0 3147 196 15 49 chr5 69811570 69812319 -133273213 - L1 LINE L1 -986 5160 4439 378 189 98 35 chr5 69812390 69812533 -133272999 - L1 LINE L1 -1675 4471 4320 848 139 46 7 chr5 69812533 69812684 -133272848 - L1PA15 LINE L1 0 6165 6009 13524 228 20 23 chr5 69812684 69816587 -133268945 - L1PA15-16 LINE L1 -1286 5563 1668 833 271 111 36 chr5 69816610 69817091 -133268441 - L1MC4a LINE L1 -299 5822 5713 7126 144 34 28 chr5 69818466 69819888 -133265644 + L1P3 LINE L1 5 1434 -5027 719 220 6 19 chr5 69820968 69821127 -133264405 - L1MC4a LINE L1 -504 5662 5506 23 54 0 0 chr5 69821162 69821199 -133264333 + AT_rich Low_complexity Low_complexity 1 37 0 1559 207 7 0 chr5 69821201 69821491 -133264041 + AluSx SINE Alu 2 293 -19 676 0 24 0 chr5 69821491 69821575 -133263957 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 1249 277 94 7 chr5 69821602 69822296 -133263236 - L1M4 LINE L1 -3223 2923 2170 1937 223 103 0 chr5 69823499 69823957 -133261575 + MLT1D LTR MaLR 1 505 0 1954 236 63 47 chr5 69823963 69824609 -133260923 + MLT1D-int LTR MaLR 5 660 -711 782 232 8 77 chr5 69824661 69824907 -133260625 + MLT1D-int LTR MaLR 659 887 -484 1153 232 58 96 chr5 69825020 69825155 -133260377 + MLT1D-int LTR MaLR 939 1078 -293 3924 165 44 5 chr5 69825155 69825906 -133259626 - L1MC1 LINE L1 -5 6328 5549 1153 232 58 96 chr5 69825906 69826219 -133259313 + MLT1D-int LTR MaLR 1078 1370 -1 1270 248 117 11 chr5 69826220 69826571 -133258961 + MLT1D LTR MaLR 1 388 -117 392 0 21 0 chr5 69827101 69827149 -133258383 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 2042 143 0 0 chr5 69827155 69827449 -133258083 - AluSq SINE Alu -19 294 1 327 299 5 30 chr5 69827486 69827683 -133257849 - L1ME LINE L1 -302 5819 5628 3258 119 54 52 chr5 69827696 69828328 -133257204 - L1MA4 LINE L1 -6 6294 5662 394 206 132 110 chr5 69833276 69833412 -133252120 + MER5B DNA MER1_type 26 164 -14 4526 176 34 22 chr5 69833702 69834591 -133250941 - MER54A LTR ERVL -1 900 2 28 48 0 0 chr5 69835174 69835216 -133250316 + AT_rich Low_complexity Low_complexity 1 42 0 188 273 242 50 chr5 69835847 69835946 -133249586 - L2 LINE L2 -1 3271 3154 1342 240 14 7 chr5 69835963 69836250 -133249282 - MLT1E2 LTR MaLR 0 626 338 25 51 0 0 chr5 69836457 69836496 -133249036 + AT_rich Low_complexity Low_complexity 1 39 0 1958 142 0 19 chr5 69836819 69837153 -133248379 + AluSx SINE Alu 1 312 0 330 235 153 10 chr5 69838860 69838958 -133246574 + MLT1J LTR MaLR 39 150 -361 314 310 162 53 chr5 69839190 69839474 -133246058 + L1MC4a LINE L1 5320 5634 -2174 228 245 31 20 chr5 69839646 69839744 -133245788 + L1MC4a LINE L1 5843 5941 -1867 181 360 99 19 chr5 69840165 69840326 -133245206 - MIR SINE MIR -41 221 48 197 89 36 36 chr5 69840363 69840419 -133245113 + (CAA)n Simple_repeat Simple_repeat 1 56 0 344 273 98 8 chr5 69840928 69841060 -133244472 + MIR SINE MIR 119 262 0 23 33 0 0 chr5 69841456 69841486 -133244046 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 69841897 69841930 -133243602 + AT_rich Low_complexity Low_complexity 1 33 0 1981 132 0 0 chr5 69844279 69844560 -133240972 + AluSq SINE Alu 1 281 -32 362 213 87 47 chr5 69845117 69845244 -133240288 + MLT1H LTR MaLR 37 168 -381 242 236 146 27 chr5 69845390 69845500 -133240032 + MLT1F LTR MaLR 404 526 -16 262 216 108 72 chr5 69845529 69845640 -133239892 + MLT1F-int LTR MaLR 3 117 -1618 1232 116 164 7 chr5 69846255 69846451 -133239081 - Tigger3b DNA MER2_type -2202 826 573 1270 178 91 38 chr5 69846451 69846738 -133238794 - AluJo SINE Alu -10 302 1 1232 116 164 7 chr5 69846738 69846816 -133238716 - Tigger3b DNA MER2_type -2455 573 509 2345 36 0 0 chr5 69846816 69847094 -133238438 - L1P2 LINE L1 -391 5764 5487 2590 29 3 0 chr5 69847094 69847426 -133238106 + L1PA4 LINE L1 5831 6171 0 3155 146 7 33 chr5 69847426 69847969 -133237563 - Tigger3b DNA MER2_type -689 542 14 298 316 86 40 chr5 69848413 69848565 -133236967 + MIR3 SINE MIR 19 177 -31 190 310 134 47 chr5 69848749 69848920 -133236612 + MIR SINE MIR 20 205 -57 17653 189 21 8 chr5 69849209 69852322 -133233210 + L1PA14 LINE L1 20 3090 -4509 1704 161 15 11 chr5 69852322 69852595 -133232937 + AluSx SINE Alu 1 274 -38 17653 189 21 8 chr5 69852595 69853760 -133231772 + L1PA14 LINE L1 3090 4238 -3361 189 0 0 0 chr5 69853760 69853781 -133231751 + (TTG)n Simple_repeat Simple_repeat 2 22 0 17653 189 21 8 chr5 69853781 69855993 -133229539 + L1PA14 LINE L1 4238 6875 -724 491 164 58 10 chr5 69855989 69856093 -133229439 - L1M3 LINE L1 -492 5688 5580 * 4607 108 8 4 chr5 69856095 69856805 -133228727 + L1PA14 LINE L1 6884 7596 -3 1772 141 61 61 chr5 69857999 69858374 -133227158 + THE1C LTR MaLR 1 375 0 756 223 41 55 chr5 69859712 69859932 -133225600 + MLT1B LTR MaLR 174 390 0 933 332 108 17 chr5 69861032 69861564 -133223968 - L2 LINE L2 0 3313 2714 1679 157 0 14 chr5 69861622 69861909 -133223623 + AluJo SINE Alu 1 283 -29 443 351 6 0 chr5 69862153 69862318 -133223214 + MIR SINE MIR 87 252 -10 591 355 115 11 chr5 69862394 69863029 -133222503 + L2 LINE L2 2613 3313 0 512 213 91 91 chr5 69863439 69863692 -133221840 + MER112 DNA MER1_type 1 253 -3 308 272 86 0 chr5 69863730 69863811 -133221721 - L1MC4 LINE L1 -1335 6707 6620 402 39 0 0 chr5 69864039 69864091 -133221441 + (CA)n Simple_repeat Simple_repeat 2 53 0 196 135 19 19 chr5 69864418 69864470 -133221062 + (TA)n Simple_repeat Simple_repeat 1 52 0 301 339 8 0 chr5 69864682 69864803 -133220729 - MER94 DNA DNA -4 130 9 300 384 70 12 chr5 69864906 69865078 -133220454 - MIR SINE MIR -79 183 2 28 0 0 0 chr5 69865428 69865456 -133220076 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 69865935 69865961 -133219571 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr5 69866267 69866294 -133219238 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 225 178 0 0 chr5 69866631 69866676 -133218856 + A-rich Low_complexity Low_complexity 1 45 0 206 292 79 22 chr5 69866781 69866870 -133218662 + MIR3 SINE MIR 62 155 -53 296 311 30 30 chr5 69866921 69867088 -133218444 + MER58B DNA MER1_type 175 341 0 22 56 0 0 chr5 69867486 69867522 -133218010 + AT_rich Low_complexity Low_complexity 1 36 0 2072 114 40 0 chr5 69868476 69868773 -133216759 - AluSc SINE Alu 0 309 1 4222 256 48 65 chr5 69868838 69869377 -133216155 + L1M4 LINE L1 14 561 -6085 2437 83 3 0 chr5 69869377 69869689 -133215843 + AluSp SINE Alu 1 313 0 4222 256 48 65 chr5 69869689 69871482 -133214050 + L1M4 LINE L1 561 2411 -4235 4658 239 76 27 chr5 69871554 69871919 -133213613 + L1M4 LINE L1 3871 4216 -2466 1974 90 0 4 chr5 69871919 69872174 -133213358 + AluSc SINE Alu 40 293 -16 4658 239 76 27 chr5 69872174 69872553 -133212979 + L1M4 LINE L1 4216 4575 -2107 218 79 0 26 chr5 69872553 69872591 -133212941 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 4658 239 76 27 chr5 69872591 69873003 -133212529 + L1M4 LINE L1 4575 4965 -1717 257 51 26 0 chr5 69873003 69873042 -133212490 + (TTG)n Simple_repeat Simple_repeat 3 42 0 4658 239 76 27 chr5 69873042 69874156 -133211376 + L1M4 LINE L1 4965 6257 -425 262 42 42 21 chr5 69874163 69874211 -133211321 + (TTTTA)n Simple_repeat Simple_repeat 3 51 0 22 0 0 0 chr5 69874211 69874233 -133211299 + AT_rich Low_complexity Low_complexity 1 22 0 1079 191 93 4 chr5 69874233 69874458 -133211074 - MLT1D LTR MaLR -13 492 248 258 197 14 28 chr5 69874623 69874694 -133210838 + MLT1K LTR MaLR 514 583 -5 2898 162 6 2 chr5 69874722 69875216 -133210316 + LOR1a LTR ERV1 1 496 -1 2073 121 4 0 chr5 69875230 69875511 -133210021 + AluSx SINE Alu 1 282 -30 294 149 0 0 chr5 69875623 69875670 -133209862 + U5 snRNA snRNA 1 47 -69 29 0 0 0 chr5 69876054 69876083 -133209449 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 69876139 69876169 -133209363 + AT_rich Low_complexity Low_complexity 1 30 0 337 279 73 84 chr5 69876274 69876453 -133209079 + MER5A DNA MER1_type 11 187 -2 25 0 0 0 chr5 69877509 69877534 -133207998 + AT_rich Low_complexity Low_complexity 1 25 0 25 90 0 0 chr5 69877666 69877733 -133207799 + AT_rich Low_complexity Low_complexity 1 67 0 758 122 0 9 chr5 69878460 69878575 -133206957 + MSTB1 LTR MaLR 4 117 -315 463 193 11 0 chr5 69878563 69878651 -133206881 + MSTB1 LTR MaLR 329 417 -15 * 1195 277 70 3 chr5 69878677 69879248 -133206284 - L1MCb LINE L1 -2678 3886 3278 * 5276 47 3 0 chr5 69879241 69879906 -133205626 - L1PA4 LINE L1 -3695 2451 1785 24173 31 3 0 chr5 69879906 69883602 -133201930 + L1PA4 LINE L1 2444 6147 -8 3576 257 53 27 chr5 69883616 69884101 -133201431 - L1MCb LINE L1 -3268 3296 2825 1904 149 20 38 chr5 69884101 69884444 -133201088 + MER1B DNA MER1_type 1 337 0 3576 257 53 27 chr5 69884444 69886835 -133198697 - L1MCb LINE L1 -3739 2825 205 318 294 11 11 chr5 69886914 69887006 -133198526 - L1MCb LINE L1 -6314 250 159 189 0 0 0 chr5 69887590 69887611 -133197921 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 200 238 48 119 chr5 69888179 69888305 -133197227 - MER5A DNA MER1_type -71 118 2 * 350 344 7 92 chr5 69888305 69888585 -133196947 + L2 LINE L2 2177 2432 -882 253 252 109 27 chr5 69888889 69889036 -133196496 - L1M4 LINE L1 -2196 3950 3792 204 163 0 0 chr5 69889123 69889166 -133196366 + (CA)n Simple_repeat Simple_repeat 2 44 0 844 261 54 48 chr5 69889175 69889547 -133195985 + HAL1b LINE L1 406 779 -569 320 265 96 12 chr5 69890051 69890217 -133195315 + L1M4 LINE L1 2360 2539 -3607 686 224 26 116 chr5 69890676 69891056 -133194476 - L1MC4 LINE L1 -5 8037 7692 * 3328 196 14 45 chr5 69891035 69891141 -133194391 - L1 LINE L1 -880 5266 5158 1891 137 7 4 chr5 69891141 69891418 -133194114 + AluSx SINE Alu 1 278 -34 378 0 0 0 chr5 69891418 69891460 -133194072 + (CA)n Simple_repeat Simple_repeat 2 43 0 3328 196 14 45 chr5 69891460 69892206 -133193326 - L1 LINE L1 -986 5160 4439 450 206 118 0 chr5 69892273 69892409 -133193123 - L1 LINE L1 -1675 4471 4320 860 120 53 7 chr5 69892409 69892559 -133192973 - L1PA15 LINE L1 0 6165 6009 2299 204 56 16 chr5 69892559 69893117 -133192415 - L1P LINE L1 -1286 4860 4281 19822 96 18 16 chr5 69893299 69898871 -133186661 + L1PA7 LINE L1 622 6153 -1 1157 290 43 67 chr5 69899695 69900229 -133185303 - LTR33 LTR ERVL 0 521 1 221 320 0 13 chr5 69900312 69900387 -133185145 + MIR SINE MIR 32 105 -157 221 246 0 0 chr5 69900863 69900928 -133184604 + A-rich Low_complexity Low_complexity 1 65 0 295 190 0 0 chr5 69902172 69902230 -133183302 + MLT1F LTR MaLR 5 62 -533 714 177 0 8 chr5 69902232 69902356 -133183176 - FLAM_A SINE Alu -12 130 8 438 285 93 57 chr5 69902361 69902827 -133182705 + MLT1F LTR MaLR 52 530 -12 1978 130 24 7 chr5 69902922 69903214 -133182318 - AluSx SINE Alu -9 303 7 341 262 86 119 chr5 69903780 69903990 -133181542 - L1ME LINE L1 -557 5564 5362 7609 29 0 0 chr5 69904017 69905560 -133179972 - L1PA3 LINE L1 0 6155 4615 383 277 15 44 chr5 69905706 69905843 -133179689 + MLT2F LTR ERVL 2 134 -529 1640 225 35 3 chr5 69905873 69906215 -133179317 + ERVL LTR ERVL 4150 4502 -1262 2028 178 88 16 chr5 69906585 69907017 -133178515 + MLT1C LTR MaLR 5 467 0 758 356 144 0 chr5 69907056 69907430 -133178102 + Zaphod DNA AcHobo 93 520 -3511 * 820 246 71 38 chr5 69907416 69907965 -133177567 - MER69 DNA AcHobo -42 2484 1887 21 0 0 0 chr5 69907989 69908010 -133177522 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 22 77 chr5 69908169 69908352 -133177180 - MER69 DNA AcHobo -1155 1371 1199 829 304 35 8 chr5 69908446 69908703 -133176829 + MLT2E LTR ERVL 11 274 -354 216 0 0 0 chr5 69908901 69908925 -133176607 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 373 315 41 68 chr5 69908991 69909385 -133176147 - L1MEd LINE L1 -5734 385 3 12404 99 4 2 chr5 69910407 69913045 -133172487 + L1PA8 LINE L1 3528 6159 -13 2515 243 33 40 chr5 69913048 69913900 -133171632 + L1ME2 LINE L1 5318 6163 -1 198 327 18 0 chr5 69913900 69913955 -133171577 + L3 LINE CR1 1412 1467 -110 397 194 82 41 chr5 69916092 69916190 -133169342 - MLT1J2 LTR MaLR 0 450 349 438 230 37 45 chr5 69916247 69916443 -133169089 - MLT1J2 LTR MaLR -243 203 6 2235 97 132 5 chr5 69916475 69916855 -133168677 + MSTA LTR MaLR 1 428 0 2512 240 28 62 chr5 69917917 69918658 -133166874 + L1MCa LINE L1 2 665 -5380 1775 113 104 45 chr5 69918658 69919012 -133166520 + THE1C LTR MaLR 1 375 0 2512 240 28 62 chr5 69919012 69919143 -133166389 + L1MCa LINE L1 665 799 -5246 435 268 6 13 chr5 69919152 69919309 -133166223 + L1MCa LINE L1 765 920 -5125 1386 251 32 16 chr5 69919337 69919768 -133165764 + L1M4 LINE L1 3771 4208 -1938 24 32 0 0 chr5 69920280 69920311 -133165221 + AT_rich Low_complexity Low_complexity 1 31 0 322 339 82 49 chr5 69921229 69921533 -133163999 + L1MCb LINE L1 48 361 -5684 3594 277 68 20 chr5 69921586 69922789 -133162743 + L1M4 LINE L1 2767 4070 -2076 373 115 39 0 chr5 69922789 69922867 -133162665 - L1MA7 LINE L1 -5 6286 6206 3594 277 68 20 chr5 69922867 69923289 -133162243 + L1M4 LINE L1 4070 4470 -1676 182 37 37 0 chr5 69923520 69923547 -133161985 + (TTG)n Simple_repeat Simple_repeat 2 29 0 25 31 0 0 chr5 69924221 69924253 -133161279 + AT_rich Low_complexity Low_complexity 1 32 0 522 79 0 0 chr5 69924854 69924930 -133160602 + Alu SINE Alu 1 76 -235 303 290 65 36 chr5 69925297 69925325 -133160207 - L1ME2 LINE L1 -50 6114 6088 1591 134 24 144 chr5 69925325 69925706 -133159826 + MER1B DNA MER1_type 1 335 -2 303 290 65 36 chr5 69925706 69925815 -133159717 - L1ME2 LINE L1 -76 6088 5973 804 168 201 4 chr5 69926513 69926757 -133158775 + L1ME3A LINE L1 5665 5956 -214 423 204 195 0 chr5 69927029 69927142 -133158390 + MIR SINE MIR 72 206 -56 235 286 238 8 chr5 69927664 69927790 -133157742 - MIR SINE MIR -84 178 24 479 322 159 0 chr5 69928364 69928578 -133156954 - MIR SINE MIR -2 260 13 314 181 57 76 chr5 69928689 69928794 -133156738 + L1MC4 LINE L1 6614 6716 -1326 * 325 293 85 70 chr5 69928783 69929053 -133156479 - L1M4 LINE L1 -2498 3648 3375 559 264 44 23 chr5 69929778 69930010 -133155522 + L1ME3A LINE L1 5919 6168 -2 36 53 0 0 chr5 69930360 69930417 -133155115 + AT_rich Low_complexity Low_complexity 1 57 0 416 319 96 45 chr5 69931163 69931590 -133153942 + L1M4 LINE L1 4384 4832 -1314 218 114 0 45 chr5 69931971 69932015 -133153517 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 602 236 55 16 chr5 69932793 69932975 -133152557 - MER5A DNA MER1_type 0 189 1 418 299 162 39 chr5 69933191 69933425 -133152107 - L2 LINE L2 -555 2759 2497 183 42 0 0 chr5 69933672 69933696 -133151836 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 213 39 0 0 chr5 69935342 69935368 -133150164 + (TG)n Simple_repeat Simple_repeat 1 26 0 27 49 0 0 chr5 69936009 69936050 -133149482 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr5 69936496 69936526 -133149006 + AT_rich Low_complexity Low_complexity 1 30 0 1575 269 64 24 chr5 69936700 69937450 -133148082 - L1M4 LINE L1 -1344 5038 4259 2262 88 9 35 chr5 69937455 69937772 -133147760 - AluSx SINE Alu -3 309 1 2734 171 14 6 chr5 69937772 69938280 -133147252 - L1MC1 LINE L1 -10 6323 5812 776 197 44 6 chr5 69938283 69938466 -133147066 - L1MCa LINE L1 -5300 1126 937 272 218 10 20 chr5 69938942 69939043 -133146489 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 3728 154 75 8 chr5 69939330 69939370 -133146162 + MER50 LTR ERV1 1 37 -697 246 32 0 0 chr5 69939370 69939401 -133146131 + (CA)n Simple_repeat Simple_repeat 1 31 0 3728 154 75 8 chr5 69939401 69940027 -133145505 + MER50 LTR ERV1 37 712 -22 256 48 48 0 chr5 69940099 69940141 -133145391 + (TA)n Simple_repeat Simple_repeat 1 44 0 1328 192 17 31 chr5 69941426 69941717 -133143815 + AluJo SINE Alu 2 288 -14 21 57 0 0 chr5 69942025 69942060 -133143472 + AT_rich Low_complexity Low_complexity 1 35 0 626 241 158 20 chr5 69942280 69942689 -133142843 - L1M4 LINE L1 -3592 2790 2319 1090 273 77 15 chr5 69942798 69943267 -133142265 + HAL1 LINE L1 1268 1765 -742 585 85 53 0 chr5 69944965 69945059 -133140473 + HY1 scRNA scRNA 13 111 -1 277 204 0 0 chr5 69945467 69945516 -133140016 - MER5B DNA MER1_type 0 178 130 183 80 0 0 chr5 69945537 69945562 -133139970 + (TC)n Simple_repeat Simple_repeat 2 26 0 1263 125 18 31 chr5 69945622 69945846 -133139686 - THE1C LTR MaLR -2 373 153 8769 37 3 0 chr5 69945846 69947267 -133138265 + L1PA4 LINE L1 4305 5730 -425 2282 40 0 0 chr5 69947273 69947544 -133137988 + L1PA4 LINE L1 5874 6147 -8 207 0 69 0 chr5 69947544 69947573 -133137959 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 865 170 6 19 chr5 69947579 69947719 -133137813 - THE1C LTR MaLR -211 164 27 706 267 90 112 chr5 69947719 69948728 -133136804 + LTR28 LTR ERV1 1 1755 0 24216 145 21 9 chr5 69948821 69955578 -133129954 + LTR28-int LTR ERV1 1 7091 0 718 263 236 87 chr5 69955587 69956534 -133128998 + MER52A LTR ERV1 667 1755 0 564 306 20 17 chr5 69956644 69957044 -133128488 - L1MEc LINE L1 -3711 2504 2145 1666 246 126 19 chr5 69957085 69957650 -133127882 - L1MD1 LINE L1 -15 6227 5603 775 267 58 33 chr5 69957718 69957991 -133127541 + L1ME1 LINE L1 5878 6165 -1 1969 203 39 9 chr5 69958065 69958498 -133127034 - L1MD2 LINE L1 -13 6346 5901 239 185 0 56 chr5 69958506 69958560 -133126972 + MER5A DNA MER1_type 136 186 -3 349 278 95 88 chr5 69958802 69958889 -133126643 - L1MD2 LINE L1 -440 5681 5596 1061 137 0 16 chr5 69958889 69959071 -133126461 - L1MB1 LINE L1 -5 6163 5985 349 278 95 88 chr5 69959071 69959256 -133126276 - L1MD2 LINE L1 -525 5596 5407 26 0 0 0 chr5 69959465 69959491 -133126041 + AT_rich Low_complexity Low_complexity 1 26 0 1330 79 11 6 chr5 69960003 69960181 -133125351 - L1PA10 LINE L1 -15 6153 5975 2017 196 38 80 chr5 69960354 69960932 -133124600 + MLT2B3 LTR ERVL 1 554 0 240 314 12 23 chr5 69961101 69961187 -133124345 - L2 LINE L2 -57 3256 3172 2266 79 0 3 chr5 69961910 69962202 -133123330 - AluY SINE Alu -20 291 1 302 351 138 0 chr5 69962351 69962576 -133122956 + MIR SINE MIR 2 257 -5 7605 29 0 0 chr5 69964183 69965329 -133120203 + L1PA4 LINE L1 5007 6152 -3 1502 237 25 11 chr5 69965476 69965835 -133119697 + MLT2D LTR ERVL 1 364 -50 198 0 0 0 chr5 69965836 69965858 -133119674 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 243 0 0 0 chr5 69965857 69965884 -133119648 + (GA)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr5 69966029 69966053 -133119479 + AT_rich Low_complexity Low_complexity 1 24 0 252 238 0 0 chr5 69966072 69966135 -133119397 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 287 280 0 13 chr5 69966390 69966465 -133119067 - LTR16C LTR ERVL 0 491 418 398 373 88 25 chr5 69966517 69966801 -133118731 - LTR16C LTR ERVL -189 302 1 230 227 173 0 chr5 69967068 69967143 -133118389 - MLT1L LTR MaLR -220 395 308 42689 45 6 2 chr5 69967219 69973344 -133112188 + L1PA3 LINE L1 3 6155 0 241 217 76 43 chr5 69973439 69973531 -133112001 - LTR67 LTR ERVL -22 535 441 2104 125 0 0 chr5 69973861 69974164 -133111368 + AluSg1 SINE Alu 1 303 -6 347 285 56 58 chr5 69976303 69976699 -133108833 + L1M4 LINE L1 3353 3747 -2399 2845 16 0 0 chr5 69976971 69977288 -133108244 - AluYb8 SINE Alu 0 318 2 305 305 32 32 chr5 69977482 69977636 -133107896 - MIR SINE MIR -75 187 34 2087 103 0 0 chr5 69978543 69978815 -133106717 - AluSg SINE Alu -38 272 1 604 60 0 0 chr5 69978887 69978970 -133106562 + Alu SINE Alu 224 306 -3 2278 161 10 21 chr5 69979823 69980209 -133105323 + MSTC LTR MaLR 17 398 -30 21 36 0 0 chr5 69980855 69980883 -133104649 + AT_rich Low_complexity Low_complexity 1 28 0 194 0 39 0 chr5 69981317 69981343 -133104189 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1722 211 18 18 chr5 69981745 69982143 -133103389 + L1M4c LINE L1 1411 1808 -4576 330 243 54 36 chr5 69982147 69982258 -133103274 + L1M4c LINE L1 1931 2043 -4341 227 269 21 41 chr5 69982258 69982403 -133103129 + HAL1 LINE L1 1011 1152 -1355 * 959 253 34 17 chr5 69982398 69982447 -133103085 - L1MDb LINE L1 -917 6648 6601 189 74 0 0 chr5 69982447 69982474 -133103058 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 959 253 34 17 chr5 69982474 69982780 -133102752 - L1MDb LINE L1 -964 6601 6287 881 245 54 54 chr5 69982804 69983322 -133102210 - L1MDb LINE L1 -1832 5733 5216 1045 261 50 96 chr5 69983384 69983642 -133101890 - L1MDb LINE L1 -2337 5228 4960 2361 178 32 86 chr5 69983642 69984227 -133101305 + MLT2B3 LTR ERVL 1 554 0 1045 261 50 96 chr5 69984227 69984876 -133100656 - L1MDb LINE L1 -2605 4960 4363 5905 40 1 1 chr5 69984896 69985616 -133099916 - L1PA3 LINE L1 -3 6152 5433 8783 31 8 1 chr5 69985731 69986803 -133098729 - L1PA3 LINE L1 -1125 5021 3943 268 202 23 23 chr5 69986791 69986877 -133098655 - L1MDb LINE L1 -3211 4354 4269 * 2117 145 36 20 chr5 69986890 69987248 -133098284 + THE1B LTR MaLR 1 364 0 232 209 99 64 chr5 69987306 69987478 -133098054 - L1MDb LINE L1 -3895 3670 3493 * 671 197 47 71 chr5 69987468 69987872 -133097660 - L1MDb LINE L1 -4930 2635 2242 3191 111 48 14 chr5 69988330 69988846 -133096686 - L1PA15 LINE L1 -3 6162 5629 612 120 0 0 chr5 69988862 69988954 -133096578 - L1M4 LINE L1 -5011 2554 2463 * 2455 194 24 54 chr5 69988944 69989536 -133095996 - L1M4 LINE L1 -6960 605 32 394 207 26 141 chr5 69989539 69989766 -133095766 - L1MEc LINE L1 -4631 1765 1565 297 250 93 29 chr5 69989781 69989921 -133095611 - L1MEc LINE L1 -4815 1400 1252 29 28 0 0 chr5 69989934 69989970 -133095562 + AT_rich Low_complexity Low_complexity 1 36 0 2349 159 14 5 chr5 69989985 69990420 -133095112 - L1MA4 LINE L1 -16 6284 5846 3519 139 5 5 chr5 69990420 69991045 -133094487 + L1MA4 LINE L1 5217 5841 -459 1879 267 60 23 chr5 69991155 69992052 -133093480 - L1MEc LINE L1 -5217 1179 207 270 0 0 0 chr5 69992305 69992335 -133093197 + (CA)n Simple_repeat Simple_repeat 2 31 0 247 359 65 22 chr5 69992466 69992650 -133092882 + MIR SINE MIR 57 248 -14 23 86 0 0 chr5 69993973 69994031 -133091501 + AT_rich Low_complexity Low_complexity 1 58 0 34 65 0 0 chr5 69994153 69994215 -133091317 + AT_rich Low_complexity Low_complexity 1 62 0 435 275 111 34 chr5 69995083 69995290 -133090242 - L2 LINE L2 -9 3304 3082 1131 193 109 4 chr5 69998003 69998277 -133087255 - L1ME3 LINE L1 -2 6160 5858 7513 28 3 0 chr5 69999402 70000532 -133085000 - L1PA3 LINE L1 -3 6152 5024 4136 31 0 21 chr5 70000532 70000666 -133084866 + L1P LINE L1 4523 4658 -1488 2724 29 0 3 chr5 70000666 70000977 -133084555 + AluYa5 SINE Alu 1 310 -1 4136 31 0 21 chr5 70000977 70001353 -133084179 + L1P LINE L1 4658 5022 -1124 220 26 0 51 chr5 70001609 70001648 -133083884 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1061 264 42 34 chr5 70002849 70003228 -133082304 + MER93a LTR ERV1 21 402 0 1154 271 14 18 chr5 70003238 70003522 -133082010 + MLT1I LTR MaLR 80 362 -47 21 0 0 0 chr5 70004356 70004377 -133081155 + AT_rich Low_complexity Low_complexity 1 21 0 2271 84 14 3 chr5 70004450 70004746 -133080786 - AluSp SINE Alu -12 301 3 598 318 96 0 chr5 70005198 70005418 -133080114 + MIR SINE MIR 12 252 -10 25 0 0 0 chr5 70005443 70005468 -133080064 + AT_rich Low_complexity Low_complexity 1 25 0 384 103 0 0 chr5 70005856 70005914 -133079618 + (TG)n Simple_repeat Simple_repeat 1 58 0 787 272 146 41 chr5 70006508 70006993 -133078539 + MLT1G1 LTR MaLR 16 551 -44 25 0 0 0 chr5 70006995 70007020 -133078512 + AT_rich Low_complexity Low_complexity 1 25 0 2252 90 0 17 chr5 70007027 70007326 -133078206 + AluSg SINE Alu 1 294 -16 3003 174 34 14 chr5 70007327 70007949 -133077583 - L1MB4 LINE L1 -5 6175 5542 287 282 26 17 chr5 70008546 70008663 -133076869 - MER103 DNA DNA -48 118 1 799 177 67 12 chr5 70009076 70009240 -133076292 + MER5B DNA MER1_type 4 176 -2 712 276 35 43 chr5 70010096 70010292 -133075240 + MIR SINE MIR 11 206 -56 258 32 0 0 chr5 70010292 70010323 -133075209 + (CA)n Simple_repeat Simple_repeat 2 32 0 712 276 35 43 chr5 70010323 70010380 -133075152 + MIR SINE MIR 206 262 0 21 0 0 0 chr5 70011493 70011514 -133074018 + AT_rich Low_complexity Low_complexity 1 21 0 11568 34 2 14 chr5 70011514 70013752 -133071780 - L1PA4 LINE L1 0 6155 3935 8410 43 0 0 chr5 70013752 70014800 -133070732 + L1PA4 LINE L1 2877 3924 -2222 231 288 0 0 chr5 70015346 70015405 -133070127 + (CATA)n Simple_repeat Simple_repeat 3 61 0 1197 170 5 28 chr5 70015439 70015657 -133069875 + AluJb SINE Alu 90 302 -10 9510 124 46 5 chr5 70016251 70017755 -133067777 - Tigger1 DNA MER2_type -1 2417 852 3630 176 15 0 chr5 70017744 70018359 -133067173 - Tigger1 DNA MER2_type -1794 624 1 * 400 333 178 28 chr5 70018407 70018794 -133066738 - L3 LINE CR1 -7 1570 1126 26 0 0 0 chr5 70018797 70018823 -133066709 + AT_rich Low_complexity Low_complexity 1 26 0 2098 147 36 28 chr5 70018860 70019221 -133066311 + THE1B LTR MaLR 1 364 0 1901 164 31 21 chr5 70019580 70019969 -133065563 - L1MB1 LINE L1 0 6168 5776 1355 154 29 36 chr5 70019969 70020248 -133065284 - L1MB1 LINE L1 -627 5556 5280 263 200 29 14 chr5 70020564 70020634 -133064898 - L2 LINE L2 0 3313 3243 497 242 91 30 chr5 70020851 70021082 -133064450 + HsTC2 DNA Tc2 1326 1746 -152 534 230 142 4 chr5 70021117 70021343 -133064189 + HsTC2 DNA Tc2 1638 1894 -4 180 338 98 36 chr5 70022083 70022388 -133063144 + L2 LINE L2 2898 3221 -92 409 94 78 0 chr5 70023778 70023842 -133061690 - MER116 DNA Mariner -9 71 3 2193 87 6 13 chr5 70024522 70024833 -133060699 + L1PA10 LINE L1 5860 6168 0 321 26 0 0 chr5 70025474 70025512 -133060020 + (TA)n Simple_repeat Simple_repeat 2 39 0 739 158 45 113 chr5 70025864 70026085 -133059447 + L1MA10 LINE L1 6022 6227 -107 2852 117 3 108 chr5 70026139 70026729 -133058803 - L1PB4 LINE L1 -8 6148 5621 1660 194 0 26 chr5 70026801 70027111 -133058421 + AluJo SINE Alu 1 302 -10 28 61 0 0 chr5 70027181 70027230 -133058302 + AT_rich Low_complexity Low_complexity 1 49 0 474 217 0 0 chr5 70027513 70027628 -133057904 + CT-rich Low_complexity Low_complexity 2 116 0 268 375 45 69 chr5 70028272 70028605 -133056927 - L2 LINE L2 0 3272 2948 231 258 32 0 chr5 70028630 70028692 -133056840 + MER117 DNA MER1_type 96 159 -38 465 269 53 47 chr5 70029029 70029200 -133056332 - MLT1H LTR MaLR 0 549 378 8276 47 0 0 chr5 70029328 70030360 -133055172 - L1P LINE L1 -3894 2252 1221 1332 201 21 87 chr5 70030597 70031189 -133054343 + L1ME LINE L1 5068 5614 -550 2139 128 0 0 chr5 70031205 70031494 -133054038 + AluSx SINE Alu 1 289 -23 2448 81 3 0 chr5 70032535 70032845 -133052687 - AluSp SINE Alu -2 311 1 1943 132 23 26 chr5 70033525 70033867 -133051665 + Tigger2a DNA MER2_type 2 342 -92 4130 105 15 0 chr5 70033867 70034457 -133051075 + MER4A LTR ERV1 1 599 -1 905 249 46 8 chr5 70034459 70034696 -133050836 - PABL_B LTR ERV1 0 667 422 356 301 7 33 chr5 70034712 70034865 -133050667 - PABL_B LTR ERV1 -518 149 1 262 146 0 0 chr5 70034865 70034906 -133050626 - PABL_B-int LTR ERV1 0 5015 4975 1124 283 50 3 chr5 70034973 70035256 -133050276 - PABL_B-int LTR ERV1 -64 7058 6763 867 206 25 0 chr5 70035259 70035419 -133050113 - PABL_B-int LTR ERV1 -1349 5773 5610 349 226 56 62 chr5 70036314 70036509 -133049023 + L1M4 LINE L1 3790 3983 -2163 632 276 27 11 chr5 70036742 70036927 -133048605 - MER5A DNA MER1_type -1 188 1 1996 171 114 5 chr5 70036972 70037358 -133048174 - MSTA LTR MaLR 0 428 1 1871 130 65 19 chr5 70037691 70038013 -133047519 - MER1B DNA MER1_type 0 337 1 499 328 8 34 chr5 70039029 70039264 -133046268 - ERVL LTR ERVL -2324 3440 3212 358 262 0 28 chr5 70039335 70039442 -133046090 - ERVL LTR ERVL -3264 2221 2118 573 322 86 33 chr5 70039522 70039919 -133045613 - ERVL LTR ERVL -2997 1999 1582 21 0 0 0 chr5 70042185 70042206 -133043326 + AT_rich Low_complexity Low_complexity 1 21 0 222 204 0 0 chr5 70042452 70042496 -133043036 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 181 388 125 12 chr5 70043551 70043791 -133041741 - L2 LINE L2 -669 2645 2379 2702 243 35 7 chr5 70043909 70044511 -133041021 - PABL_B-int LTR ERV1 -1578 5544 4926 * 6477 249 18 15 chr5 70044507 70045763 -133039769 - PABL_B-int LTR ERV1 -3061 4061 2800 2098 131 17 0 chr5 70045763 70046061 -133039471 - AluSq SINE Alu -10 303 1 6477 249 18 15 chr5 70046061 70046172 -133039360 - PABL_B-int LTR ERV1 -4322 2800 2691 795 260 48 26 chr5 70046171 70046554 -133038978 - PABL_B-int LTR ERV1 -5753 1369 890 * 1441 272 18 39 chr5 70046557 70047318 -133038214 - PABL_B-int LTR ERV1 -4645 370 42 987 212 27 46 chr5 70047341 70047600 -133037932 - PABL_B LTR ERV1 0 667 414 346 274 26 52 chr5 70047601 70047754 -133037778 - PABL_B LTR ERV1 -518 149 1 530 202 32 0 chr5 70047756 70047850 -133037682 + Tigger2 DNA MER2_type 2622 2718 0 331 287 138 28 chr5 70048797 70049530 -133036002 + L1PA14 LINE L1 3445 5926 -235 * 1107 277 71 32 chr5 70049119 70049668 -133035864 + L1ME3A LINE L1 5478 6064 -106 180 0 0 0 chr5 70049668 70049688 -133035844 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1107 277 71 32 chr5 70049688 70049791 -133035741 + L1ME3A LINE L1 6064 6162 -8 220 305 21 53 chr5 70049844 70049939 -133035593 - MIR3 SINE MIR -3 205 114 2295 84 0 3 chr5 70052751 70053048 -133032484 + AluY SINE Alu 1 296 -15 322 301 73 73 chr5 70053229 70053448 -133032084 - HAL1 LINE L1 -13 2494 2276 682 253 87 49 chr5 70053887 70054194 -133031338 - MLT1G LTR MaLR -214 376 58 907 57 0 32 chr5 70054284 70054408 -133031124 - L1PB1 LINE L1 -3 6148 6029 26 52 0 17 chr5 70055655 70055675 -133029857 + AT_rich Low_complexity Low_complexity 1 20 -37 2180 75 0 17 chr5 70055675 70055967 -133029565 + AluY SINE Alu 1 287 -24 26 52 0 17 chr5 70055967 70056004 -133029528 + AT_rich Low_complexity Low_complexity 20 57 0 253 344 141 31 chr5 70056701 70056864 -133028668 - MIR3 SINE MIR -12 196 16 6546 201 25 12 chr5 70057206 70059344 -133026188 + L1PA15 LINE L1 3998 6157 -8 459 259 173 23 chr5 70060517 70060737 -133024795 - L1ME3A LINE L1 0 6170 5918 544 268 16 0 chr5 70060737 70060860 -133024672 - MLT1J1 LTR MaLR -260 186 62 316 384 0 0 chr5 70061100 70061225 -133024307 + L1MC4 LINE L1 6579 6703 -1339 210 0 71 48 chr5 70061275 70061317 -133024215 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 201 211 0 0 chr5 70061375 70061427 -133024105 + (TA)n Simple_repeat Simple_repeat 2 53 0 1572 208 72 8 chr5 70061625 70061985 -133023547 + MLT1B LTR MaLR 1 383 -7 1955 135 21 0 chr5 70063338 70063619 -133021913 + AluSx SINE Alu 2 288 -24 22 35 0 0 chr5 70063619 70063648 -133021884 + AT_rich Low_complexity Low_complexity 1 29 0 414 328 71 35 chr5 70066456 70066654 -133018878 + MIR SINE MIR 48 252 -10 193 345 44 18 chr5 70067220 70067333 -133018199 - L3 LINE CR1 -364 1213 1098 1917 143 13 7 chr5 70069322 70069630 -133015902 - AluSx SINE Alu 0 312 3 1514 233 37 26 chr5 70069947 70070324 -133015208 - MLT1B LTR MaLR -6 384 4 499 276 56 47 chr5 70071603 70071817 -133013715 + MIR SINE MIR 2 217 -45 233 206 41 0 chr5 70073895 70073992 -133011540 + (TA)n Simple_repeat Simple_repeat 1 101 0 24 77 0 0 chr5 70074039 70074091 -133011441 + AT_rich Low_complexity Low_complexity 1 52 0 306 0 0 0 chr5 70074472 70074506 -133011026 + (TG)n Simple_repeat Simple_repeat 1 34 0 1605 141 7 29 chr5 70075486 70075762 -133009770 + AluSx SINE Alu 39 308 -4 2346 162 52 7 chr5 70076808 70077216 -133008316 + MSTB LTR MaLR 1 426 0 222 222 37 0 chr5 70077238 70077292 -133008240 + CT-rich Low_complexity Low_complexity 1 56 0 672 250 64 13 chr5 70077353 70077589 -133007943 + L1MC4 LINE L1 6460 6707 -1335 2162 219 102 37 chr5 70077613 70078389 -133007143 + L1MC4 LINE L1 6898 7723 -319 391 158 0 24 chr5 70078395 70078477 -133007055 + L1MC4 LINE L1 7963 8042 0 377 202 131 0 chr5 70078515 70078599 -133006933 + MER5B DNA MER1_type 84 178 0 760 297 37 4 chr5 70079607 70079853 -133005679 - MIR SINE MIR -1 261 8 415 281 65 73 chr5 70080790 70081050 -133004482 - MIR SINE MIR 0 262 5 305 282 134 0 chr5 70081420 70081562 -133003970 + MIR SINE MIR 86 246 -16 575 244 55 20 chr5 70081714 70081915 -133003617 + MER63A DNA MER1_type 3 210 0 297 0 0 0 chr5 70081949 70081982 -133003550 + (CA)n Simple_repeat Simple_repeat 2 34 0 5353 214 40 19 chr5 70082754 70084779 -133000753 + L1MB4 LINE L1 3813 5877 -303 15689 218 35 23 chr5 70084831 70088688 -132996844 + L1PA16 LINE L1 1097 5074 -1743 183 42 0 0 chr5 70088688 70088712 -132996820 + (CA)n Simple_repeat Simple_repeat 1 24 0 15689 218 35 23 chr5 70088712 70090475 -132995057 + L1PA16 LINE L1 5074 6814 -3 211 352 95 22 chr5 70090565 70090744 -132994788 - L2 LINE L2 -556 2758 2567 22 0 0 0 chr5 70092294 70092316 -132993216 + AT_rich Low_complexity Low_complexity 1 22 0 1389 139 4 38 chr5 70092543 70092780 -132992752 - AluJo SINE Alu -3 309 81 317 275 141 13 chr5 70093688 70093837 -132991695 - L2 LINE L2 0 3313 3146 24796 32 5 0 chr5 70094006 70097800 -132987732 - L1PA3 LINE L1 -5 6150 2343 2327 85 13 0 chr5 70098287 70098593 -132986939 - AluSx SINE Alu 0 312 3 2298 103 5 218 chr5 70098609 70099219 -132986313 + LTR12 LTR ERV1 1 480 -234 311 181 15 16 chr5 70099759 70099843 -132985689 - L1P4 LINE L1 -726 5442 5363 1541 278 77 51 chr5 70099878 70101504 -132984028 - L1MEc LINE L1 -3586 2629 992 771 187 72 19 chr5 70102249 70102276 -132983256 + L1MC3 LINE L1 7565 7589 -196 2016 130 3 22 chr5 70102276 70102591 -132982941 + AluSx SINE Alu 1 309 -3 771 187 72 19 chr5 70102591 70102772 -132982760 + L1MC3 LINE L1 7589 7784 -1 357 336 75 23 chr5 70102806 70103020 -132982512 - L1ME4a LINE L1 -202 5919 5695 297 200 11 84 chr5 70103022 70103074 -132982458 - L1ME4a LINE L1 -468 5653 5610 2274 58 0 0 chr5 70103074 70103352 -132982180 + AluY SINE Alu 34 311 0 297 200 11 84 chr5 70103352 70103394 -132982138 - L1ME4a LINE L1 -511 5610 5566 335 278 139 0 chr5 70103682 70103797 -132981735 - L2 LINE L2 -14 3258 3128 1788 252 65 61 chr5 70105054 70105673 -132979859 + MLT1E3 LTR MaLR 2 622 -2 5258 186 42 16 chr5 70105896 70107225 -132978307 - L1MC1 LINE L1 0 6333 4978 648 239 71 32 chr5 70107817 70107972 -132977560 + MIR SINE MIR 11 171 -91 687 231 42 45 chr5 70107990 70108078 -132977454 + L1 LINE L1 3059 3146 -3000 2218 96 0 0 chr5 70108078 70108370 -132977162 + AluY SINE Alu 4 295 -16 687 231 42 45 chr5 70108370 70108589 -132976943 + L1 LINE L1 3146 3365 -2781 252 265 142 39 chr5 70108839 70109359 -132976173 - L1MC1 LINE L1 -2660 3486 2913 342 298 23 46 chr5 70109871 70110002 -132975530 - HAL1 LINE L1 -1555 952 825 347 239 0 0 chr5 70110319 70110390 -132975142 - MER58 DNA MER1_type -2147 273 203 1585 134 47 119 chr5 70111543 70111947 -132973585 - THE1C LTR MaLR 0 375 1 301 271 21 37 chr5 70111969 70112094 -132973438 - MIR SINE MIR -45 163 41 253 284 57 0 chr5 70112436 70112524 -132973008 + L2 LINE L2 3221 3313 0 22 0 0 0 chr5 70112761 70112783 -132972749 + AT_rich Low_complexity Low_complexity 1 22 0 361 290 65 39 chr5 70112999 70113154 -132972378 - HAL1b LINE L1 -1106 242 84 360 322 154 39 chr5 70114394 70114726 -132970806 - L2 LINE L2 -817 2497 2128 1285 174 115 47 chr5 70115395 70115716 -132969816 + MER2 DNA MER2_type 1 343 -1 199 286 18 0 chr5 70116016 70116072 -132969460 + L2 LINE L2 3216 3272 0 1682 232 24 22 chr5 70116148 70116558 -132968974 - MER63C DNA MER1_type -1 929 519 802 194 88 0 chr5 70116575 70116745 -132968787 + MER58A DNA MER1_type 40 224 0 1934 181 86 62 chr5 70116745 70117258 -132968274 - MER63C DNA MER1_type -405 525 1 13805 24 0 0 chr5 70118699 70121087 -132964445 - L1PA4 LINE L1 -3 6152 3765 804 181 98 83 chr5 70123205 70123459 -132962073 + MLT2C2 LTR ERVL 207 464 0 219 226 57 0 chr5 70123651 70123704 -132961828 - MIR SINE MIR -118 144 89 776 173 19 62 chr5 70124184 70124346 -132961186 + MER8 DNA MER2_type 7 161 -78 1476 178 10 48 chr5 70124388 70124681 -132960851 - AluJo SINE Alu -30 282 1 526 174 0 11 chr5 70124683 70124775 -132960757 + MER8 DNA MER2_type 148 238 -1 475 251 104 33 chr5 70124918 70125101 -132960431 + MIR SINE MIR 67 262 0 * 546 251 72 38 chr5 70125074 70125309 -132960223 - MIR SINE MIR 0 262 20 192 312 0 65 chr5 70125919 70125996 -132959536 + MIR SINE MIR 118 189 -73 217 208 10 148 chr5 70126070 70126171 -132959361 - MIR3 SINE MIR -17 191 105 771 255 90 6 chr5 70127734 70128169 -132957363 + L1MCa LINE L1 1839 2355 -4071 444 269 9 0 chr5 70128480 70128588 -132956944 + L2 LINE L2 3187 3295 -18 193 89 44 0 chr5 70128818 70128863 -132956669 + A-rich Low_complexity Low_complexity 2 48 0 236 227 91 55 chr5 70128864 70128974 -132956558 - MIR SINE MIR -83 179 66 347 246 26 0 chr5 70129009 70129123 -132956409 + (TA)n Simple_repeat Simple_repeat 1 117 0 20217 169 34 10 chr5 70129798 70133754 -132951778 - L1 LINE L1 -3407 4158 95 258 32 0 0 chr5 70133754 70133785 -132951747 + (TG)n Simple_repeat Simple_repeat 2 32 0 20217 169 34 10 chr5 70133785 70133879 -132951653 - L1 LINE L1 -7470 95 5 7278 35 0 1 chr5 70133896 70135092 -132950440 + L1PA4 LINE L1 4962 6156 0 249 306 81 58 chr5 70136445 70136703 -132948829 + MLT1L LTR MaLR 342 605 -10 308 380 26 36 chr5 70136878 70137070 -132948462 - L2 LINE L2 -2043 1271 1082 317 308 41 51 chr5 70137207 70137402 -132948130 - LTR33 LTR ERVL -13 508 316 558 307 46 28 chr5 70137448 70137666 -132947866 - LTR33 LTR ERVL -297 224 3 204 246 33 0 chr5 70138942 70139003 -132946529 + GA-rich Low_complexity Low_complexity 2 64 0 2382 180 40 14 chr5 70139262 70139707 -132945825 - LTR32 LTR ERVL 0 471 15 1755 169 0 26 chr5 70139968 70140270 -132945262 - AluJb SINE Alu -18 294 1 21 82 0 0 chr5 70140926 70140975 -132944557 + AT_rich Low_complexity Low_complexity 1 49 0 233 57 29 0 chr5 70141581 70141616 -132943916 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 1838 171 139 5 chr5 70141617 70141992 -132943540 - MSTA LTR MaLR -1 427 3 233 95 0 24 chr5 70141993 70142035 -132943497 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 426 311 73 12 chr5 70142339 70142503 -132943029 - MIR3 SINE MIR -11 197 24 408 313 39 11 chr5 70142803 70142985 -132942547 + MER5A DNA MER1_type 1 187 -2 279 0 0 0 chr5 70143492 70143523 -132942009 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2134 64 4 0 chr5 70143532 70143797 -132941735 - AluY SINE Alu -45 266 1 24 0 0 0 chr5 70143804 70143828 -132941704 + AT_rich Low_complexity Low_complexity 1 24 0 3309 158 15 3 chr5 70143858 70144442 -132941090 + LTR10C LTR ERV1 1 591 0 247 323 68 37 chr5 70144623 70144784 -132940748 - MER5A DNA MER1_type -1 188 23 817 41 0 0 chr5 70145484 70145581 -132939951 - AluY SINE Alu -7 304 208 2043 174 28 37 chr5 70145643 70145776 -132939756 - MER95 LTR ERV -4 427 294 2564 27 0 0 chr5 70145776 70146075 -132939457 + L1PA3 LINE L1 5854 6152 -3 2043 174 28 37 chr5 70146075 70146372 -132939160 - MER95 LTR ERV -137 294 1 22 0 0 0 chr5 70146849 70146871 -132938661 + AT_rich Low_complexity Low_complexity 1 22 0 225 246 143 0 chr5 70147312 70147438 -132938094 + L1ME4a LINE L1 5975 6118 -3 1489 223 30 25 chr5 70148999 70149362 -132936170 - MLT1A1 LTR MaLR 0 365 1 208 306 31 41 chr5 70149833 70149931 -132935601 - L2 LINE L2 -501 2813 2717 406 292 29 58 chr5 70149983 70150154 -132935378 - MIR SINE MIR -48 214 49 1424 277 74 27 chr5 70151365 70152104 -132933428 - HAL1b LINE L1 -144 1204 431 1492 346 77 9 chr5 70152212 70152773 -132932759 + MER115 DNA AcHobo 1 599 -94 225 154 0 0 chr5 70152773 70152812 -132932720 + (CA)n Simple_repeat Simple_repeat 2 40 0 1462 128 0 0 chr5 70152893 70153111 -132932421 - HSMAR2 DNA Mariner -1 1301 1084 5346 44 8 1 chr5 70153111 70153774 -132931758 + L1PA8 LINE L1 5451 6117 -55 6492 141 27 5 chr5 70153791 70154836 -132930696 - HSMAR2 DNA Mariner -232 1070 3 439 261 128 29 chr5 70154884 70155190 -132930342 - HAL1b LINE L1 -786 562 227 23 33 0 0 chr5 70155190 70155220 -132930312 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr5 70155360 70155395 -132930137 + AT_rich Low_complexity Low_complexity 1 35 0 2044 264 41 50 chr5 70156234 70157167 -132928365 - L1MEc LINE L1 -5082 1314 391 341 156 31 0 chr5 70157229 70157293 -132928239 - L1MEc LINE L1 -6299 97 32 280 111 37 0 chr5 70157635 70157689 -132927843 + (TA)n Simple_repeat Simple_repeat 2 57 0 246 289 0 0 chr5 70157689 70157779 -132927753 + L1MC4 LINE L1 6614 6703 -1339 234 156 0 0 chr5 70157780 70157825 -132927707 + (TA)n Simple_repeat Simple_repeat 2 46 0 485 156 10 0 chr5 70157927 70158023 -132927509 + (TA)n Simple_repeat Simple_repeat 1 97 0 261 0 0 0 chr5 70159009 70159038 -132926494 + (CA)n Simple_repeat Simple_repeat 2 30 0 266 331 133 30 chr5 70159225 70159391 -132926141 - MIR3 SINE MIR -7 201 19 387 0 0 0 chr5 70159801 70159844 -132925688 + (TG)n Simple_repeat Simple_repeat 1 43 0 1298 206 94 37 chr5 70160042 70160416 -132925116 + MLT2D LTR ERVL 10 404 -10 273 212 97 30 chr5 70160607 70160772 -132924760 + HAL1 LINE L1 1014 1189 -1318 288 297 0 0 chr5 70161013 70161077 -132924455 + L2 LINE L2 3191 3254 -18 260 267 75 42 chr5 70161085 70161205 -132924327 + MIR SINE MIR 126 249 -13 354 45 0 0 chr5 70162620 70162664 -132922868 + (CA)n Simple_repeat Simple_repeat 2 45 0 230 274 16 0 chr5 70163057 70163119 -132922413 + MER46C DNA MER2_type 255 317 -21 2792 7 0 10 chr5 70163215 70163525 -132922007 - AluYb8 SINE Alu -11 307 1 1211 228 77 25 chr5 70163764 70164128 -132921404 - MLT1B LTR MaLR -4 386 4 3538 100 18 0 chr5 70164194 70164705 -132920827 - L1PA13 LINE L1 -5 6158 5639 220 286 0 32 chr5 70165102 70165165 -132920367 + GA-rich Low_complexity Low_complexity 6 66 0 1861 217 140 2 chr5 70165353 70165810 -132919722 + MLT1F1 LTR MaLR 10 529 -38 1926 184 22 6 chr5 70165890 70166249 -132919283 - MLT1A1 LTR MaLR 0 365 1 1502 170 91 28 chr5 70167694 70168047 -132917485 - THE1C LTR MaLR 0 375 1 180 184 0 0 chr5 70168049 70168098 -132917434 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 311 295 0 49 chr5 70168604 70168726 -132916806 - MIR SINE MIR 0 262 147 21 36 0 0 chr5 70169380 70169408 -132916124 + AT_rich Low_complexity Low_complexity 1 28 0 204 203 31 16 chr5 70170088 70170152 -132915380 + GA-rich Low_complexity Low_complexity 1 65 0 2290 112 14 20 chr5 70170271 70170628 -132914904 + THE1A LTR MaLR 1 355 0 11323 102 13 3 chr5 70170628 70172192 -132913340 + THE1A-int LTR MaLR 1 1580 0 2136 124 14 11 chr5 70172192 70172546 -132912986 + THE1A LTR MaLR 1 355 0 247 299 30 0 chr5 70172716 70172783 -132912749 - tRNA-Arg-CGC tRNA tRNA -7 69 1 1870 151 7 40 chr5 70172819 70173123 -132912409 - AluSx SINE Alu -18 294 1 1912 133 60 43 chr5 70173478 70173519 -132912013 - THE1C LTR MaLR 0 375 336 2117 128 13 0 chr5 70173519 70173824 -132911708 + AluSx SINE Alu 1 309 -3 1912 133 60 43 chr5 70173824 70174151 -132911381 - THE1C LTR MaLR -39 336 1 21 0 0 0 chr5 70176603 70176624 -132908908 + AT_rich Low_complexity Low_complexity 1 21 0 351 191 145 53 chr5 70176939 70177070 -132908462 + L2 LINE L2 3158 3300 -13 615 250 0 0 chr5 70177092 70177212 -132908320 - LTR67 LTR ERVL -336 221 102 508 269 46 0 chr5 70177321 70177451 -132908081 - MER3 DNA MER1_type -73 136 1 397 334 10 2 chr5 70177453 70177596 -132907936 - MIR3 SINE MIR -50 158 12 245 234 0 0 chr5 70177753 70177800 -132907732 - MIR SINE MIR -131 77 31 1739 181 0 0 chr5 70178676 70178953 -132906579 + AluSx SINE Alu 1 277 -35 720 247 211 19 chr5 70179008 70179316 -132906216 - L2 LINE L2 -5 3308 2942 1799 130 88 34 chr5 70180027 70180381 -132905151 - THE1C LTR MaLR 0 375 3 9440 130 42 18 chr5 70180383 70181926 -132903606 - THE1C-int LTR MaLR 0 1580 1 1682 154 93 20 chr5 70181936 70182280 -132903252 - THE1C LTR MaLR -6 369 1 866 293 156 40 chr5 70182451 70183068 -132902464 + L2 LINE L2 2533 3236 -77 297 0 0 0 chr5 70183085 70183118 -132902414 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 189 180 0 0 chr5 70183215 70183265 -132902267 + (ATG)n Simple_repeat Simple_repeat 1 50 0 579 338 89 0 chr5 70183265 70183490 -132902042 - MIR SINE MIR -1 261 17 22 0 0 0 chr5 70184053 70184075 -132901457 + AT_rich Low_complexity Low_complexity 1 22 0 219 219 0 0 chr5 70184659 70184700 -132900832 + GA-rich Low_complexity Low_complexity 3 43 0 215 238 24 83 chr5 70184734 70184791 -132900741 + MIR SINE MIR 76 128 -134 2327 119 3 57 chr5 70184791 70185176 -132900356 + THE1B LTR MaLR 1 364 0 215 238 24 83 chr5 70185176 70185202 -132900330 + MIR SINE MIR 128 154 -108 472 301 112 15 chr5 70185260 70185410 -132900122 + MIR SINE MIR 34 211 -51 1596 163 60 41 chr5 70185410 70185778 -132899754 + THE1C LTR MaLR 1 375 0 472 301 112 15 chr5 70185778 70185833 -132899699 + MIR SINE MIR 211 259 -3 1640 238 34 27 chr5 70185891 70186332 -132899200 - MLT1D LTR MaLR -60 445 2 1410 218 165 8 chr5 70187114 70187509 -132898023 + LTR48 LTR ERV1 1 457 -330 336 179 36 48 chr5 70187508 70187592 -132897940 + LTR48 LTR ERV1 568 650 -137 * 214 286 0 0 chr5 70187638 70187687 -132897845 - L2 LINE L2 -11 3261 3213 922 114 23 11 chr5 70187758 70187933 -132897599 + GA-rich Low_complexity Low_complexity 4 180 0 198 171 0 0 chr5 70188197 70188238 -132897294 + (CA)n Simple_repeat Simple_repeat 1 41 0 348 370 30 12 chr5 70188259 70188424 -132897108 + MIR3 SINE MIR 2 169 -39 226 171 24 73 chr5 70188862 70188944 -132896588 - MER69 DNA AcHobo -224 2302 2225 243 0 0 0 chr5 70189721 70189748 -132895784 + (A)n Simple_repeat Simple_repeat 1 27 0 2202 154 80 20 chr5 70190094 70190496 -132895036 - MSTC LTR MaLR 0 428 3 198 325 114 40 chr5 70190933 70191284 -132894248 + L2 LINE L2 1762 2138 -1176 225 254 164 49 chr5 70191559 70191681 -132893851 + L2 LINE L2 3137 3272 0 21 36 0 0 chr5 70191700 70191728 -132893804 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr5 70191733 70191761 -132893771 + AT_rich Low_complexity Low_complexity 1 28 0 183 299 278 0 chr5 70191776 70191873 -132893659 - MIR3 SINE MIR -48 160 37 373 270 251 6 chr5 70192024 70192187 -132893345 - MIR SINE MIR -15 247 45 192 326 53 21 chr5 70193436 70193531 -132892001 + MIR SINE MIR 2 99 -163 221 329 64 21 chr5 70194535 70194675 -132890857 - L3 LINE CR1 -156 1421 1276 390 353 44 25 chr5 70194689 70194893 -132890639 + MLT1K LTR MaLR 33 240 -348 474 256 113 52 chr5 70194963 70195193 -132890339 + MLT1K LTR MaLR 339 582 -6 196 349 8 40 chr5 70195198 70195324 -132890208 - L3 LINE CR1 -300 1277 1156 29 0 0 0 chr5 70195360 70195389 -132890143 + AT_rich Low_complexity Low_complexity 1 29 0 1759 134 0 33 chr5 70195564 70195870 -132889662 - L1PA13 LINE L1 0 6163 5868 695 304 69 3 chr5 70196184 70196420 -132889112 - MIR SINE MIR -12 250 3 1379 93 53 40 chr5 70197750 70197975 -132887557 - MER30 DNA MER1_type 0 230 3 256 250 0 0 chr5 70198640 70198692 -132886840 + L2 LINE L2 3213 3264 -8 1822 147 155 19 chr5 70200440 70200815 -132884717 + MSTA LTR MaLR 3 428 0 9108 146 15 36 chr5 70200817 70202429 -132883103 + MSTA-int LTR MaLR 3 1580 0 2038 139 131 13 chr5 70202431 70202812 -132882720 + MSTA LTR MaLR 3 428 0 42 57 0 0 chr5 70203218 70203288 -132882244 + AT_rich Low_complexity Low_complexity 1 70 0 341 284 0 39 chr5 70204028 70204155 -132881377 - LTR67 LTR ERVL -5 552 431 2133 125 3 0 chr5 70204751 70205056 -132880476 + AluSx SINE Alu 1 306 -6 205 244 0 0 chr5 70205073 70205114 -132880418 + GA-rich Low_complexity Low_complexity 2 42 0 1932 128 6 32 chr5 70205275 70205588 -132879944 + AluJb SINE Alu 5 309 -3 22 35 0 0 chr5 70206230 70206259 -132879273 + AT_rich Low_complexity Low_complexity 1 29 0 912 73 81 0 chr5 70206301 70206425 -132879107 + MER85 DNA T2_type 1 134 -5 798 174 67 46 chr5 70207827 70208022 -132877510 + MER3 DNA MER1_type 5 203 -6 191 375 62 0 chr5 70208030 70208094 -132877438 - L2 LINE L2 -54 3218 3151 202 150 17 33 chr5 70208327 70208387 -132877145 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 21 0 0 0 chr5 70208400 70208421 -132877111 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 70208452 70208487 -132877045 + AT_rich Low_complexity Low_complexity 1 35 0 267 330 144 56 chr5 70209278 70209347 -132876185 - L2 LINE L2 -27 3286 3224 1382 209 65 7 chr5 70209347 70209625 -132875907 + AluJb SINE Alu 1 294 -18 351 0 0 0 chr5 70209625 70209664 -132875868 + (CA)n Simple_repeat Simple_repeat 2 40 0 267 330 144 56 chr5 70209664 70210002 -132875530 - L2 LINE L2 -88 3225 2842 535 14 28 0 chr5 70210088 70210160 -132875372 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 261 245 102 34 chr5 70210397 70210544 -132874988 + L1MC/D LINE L1 5309 5465 -2343 219 161 0 0 chr5 70210545 70210601 -132874931 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 29 47 0 0 chr5 70211024 70211067 -132874465 + AT_rich Low_complexity Low_complexity 1 43 0 2166 122 0 12 chr5 70211255 70211575 -132873957 - MER1A DNA MER1_type 0 529 214 397 229 0 76 chr5 70211583 70211688 -132873844 - MER1A DNA MER1_type -426 101 5 1726 132 96 33 chr5 70211799 70212133 -132873399 - THE1C LTR MaLR -20 355 1 264 343 129 45 chr5 70212433 70212835 -132872697 + L2 LINE L2 2538 2973 -341 354 289 121 24 chr5 70212951 70213117 -132872415 + MLT1I LTR MaLR 28 209 -200 22 56 0 0 chr5 70213167 70213203 -132872329 + AT_rich Low_complexity Low_complexity 1 36 0 1612 130 15 0 chr5 70213675 70213937 -132871595 - L1M2 LINE L1 -706 5606 5341 212 270 220 10 chr5 70213993 70214093 -132871439 - L2 LINE L2 -2 3270 3150 234 400 19 25 chr5 70214192 70214352 -132871180 - L2 LINE L2 -188 3084 2926 2507 119 19 5 chr5 70214871 70215241 -132870291 + THE1C LTR MaLR 1 375 0 27 62 0 0 chr5 70215568 70215616 -132869916 + AT_rich Low_complexity Low_complexity 1 48 0 280 297 90 9 chr5 70215651 70215762 -132869770 + L2 LINE L2 2769 2888 -426 22 70 0 0 chr5 70216151 70216194 -132869338 + AT_rich Low_complexity Low_complexity 1 43 0 331 403 89 30 chr5 70216634 70217004 -132868528 + L2 LINE L2 2877 3268 -4 272 287 53 43 chr5 70217330 70217424 -132868108 - MIR3 SINE MIR -106 102 8 370 160 0 193 chr5 70217534 70217653 -132867879 - Tigger7 DNA MER2_type -3 2584 2489 * 971 194 44 48 chr5 70217651 70217857 -132867675 - Tigger7 DNA MER2_type -466 267 63 230 200 44 0 chr5 70218007 70218052 -132867480 - Tigger7 DNA MER2_type -657 48 2 441 333 39 10 chr5 70218612 70218819 -132866713 + MIR SINE MIR 49 261 -1 367 314 176 6 chr5 70219154 70219313 -132866219 + MIR SINE MIR 72 257 -5 1895 210 32 37 chr5 70220257 70220527 -132865005 - MER82 DNA MER2_type -1 652 382 192 40 0 0 chr5 70220527 70220552 -132864980 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1895 210 32 37 chr5 70220552 70220638 -132864894 - MER82 DNA MER2_type -271 382 296 2505 171 31 5 chr5 70220638 70221083 -132864449 + MSTB2 LTR MaLR 1 457 0 1895 210 32 37 chr5 70221083 70221159 -132864373 - MER82 DNA MER2_type -357 296 221 487 141 0 0 chr5 70221160 70221231 -132864301 - AluJ/FRAM SINE Alu -18 294 224 264 221 70 58 chr5 70221284 70221370 -132864162 + L2 LINE L2 3225 3311 -2 21 71 0 0 chr5 70222544 70222586 -132862946 + AT_rich Low_complexity Low_complexity 1 42 0 870 224 40 5 chr5 70223000 70223201 -132862331 + MER3 DNA MER1_type 2 209 0 614 313 17 6 chr5 70224133 70224312 -132861220 + MER5A DNA MER1_type 3 183 -6 1897 215 42 7 chr5 70224921 70225331 -132860201 - MSTB LTR MaLR -2 424 1 2170 114 0 7 chr5 70225395 70225693 -132859839 + AluSq SINE Alu 3 298 -15 259 381 101 16 chr5 70225731 70225978 -132859554 + L3 LINE CR1 1024 1291 -286 623 137 8 185 chr5 70225978 70226171 -132859361 - MER3 DNA MER1_type -57 152 4 375 279 0 36 chr5 70226180 70226291 -132859241 + L3 LINE CR1 1312 1418 -159 13118 151 46 5 chr5 70227230 70229550 -132855982 + Tigger1 DNA MER2_type 2 2417 -1 231 343 30 47 chr5 70229659 70229828 -132855704 + L1MEd LINE L1 373 538 -5581 1064 297 136 7 chr5 70229913 70230348 -132855184 - LTR16C LTR ERVL 0 491 1 748 300 105 42 chr5 70230350 70230977 -132854555 + L1MEd LINE L1 586 1252 -4867 1507 294 180 6 chr5 70230995 70231652 -132853880 + L2 LINE L2 1866 2636 -678 433 260 55 31 chr5 70231682 70231809 -132853723 + MLT1H LTR MaLR 45 174 -375 250 292 14 0 chr5 70232089 70232161 -132853371 + L2 LINE L2 2620 2692 -622 21 36 0 0 chr5 70233018 70233046 -132852486 + AT_rich Low_complexity Low_complexity 1 28 0 2523 58 0 0 chr5 70233064 70233375 -132852157 - AluY SINE Alu 0 311 1 7009 52 7 3 chr5 70233850 70235035 -132850497 + L1PA5 LINE L1 4964 6152 -2 308 322 27 48 chr5 70235046 70235192 -132850340 + MER5A DNA MER1_type 17 159 -30 192 184 0 0 chr5 70236688 70236737 -132848795 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 279 194 60 0 chr5 70237647 70237714 -132847818 + LTR41 LTR ERVL 693 763 -10 31 26 0 0 chr5 70237888 70237926 -132847606 + AT_rich Low_complexity Low_complexity 1 38 0 2013 140 59 8 chr5 70238656 70239013 -132846519 + THE1C LTR MaLR 1 375 0 450 341 75 13 chr5 70239925 70240151 -132845381 + MIR SINE MIR 20 259 -3 225 0 0 0 chr5 70240840 70240865 -132844667 + (A)n Simple_repeat Simple_repeat 1 25 0 1701 197 0 0 chr5 70242051 70242346 -132843186 + AluJb SINE Alu 1 295 -17 6227 74 9 0 chr5 70243624 70244577 -132840955 - L1PA8A LINE L1 0 6131 5170 24 32 0 0 chr5 70244660 70244691 -132840841 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 70244729 70244761 -132840771 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr5 70245177 70245210 -132840322 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 70245234 70245264 -132840268 + AT_rich Low_complexity Low_complexity 1 30 0 1133 221 10 19 chr5 70246045 70246410 -132839122 - L1M4 LINE L1 -693 5989 5624 5779 239 48 32 chr5 70246503 70248503 -132837029 - L1M4 LINE L1 -4606 2040 16 29 28 0 0 chr5 70248522 70248558 -132836974 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 70248957 70248981 -132836551 + AT_rich Low_complexity Low_complexity 1 24 0 437 316 144 0 chr5 70249063 70249237 -132836295 - MIR SINE MIR -1 261 63 13876 149 23 13 chr5 70249820 70252198 -132833334 - Tigger1 DNA MER2_type 0 2418 16 939 240 158 24 chr5 70252693 70253143 -132832389 + MER113 DNA MER1_type? 2 511 -10 181 304 13 63 chr5 70253144 70253223 -132832309 - MIR3 SINE MIR -44 164 90 221 311 8 82 chr5 70253398 70253520 -132832012 - MIR SINE MIR -59 203 91 846 225 145 36 chr5 70253915 70254076 -132831456 - AluJo SINE Alu 0 311 169 216 0 0 0 chr5 70254076 70254100 -132831432 + (TA)n Simple_repeat Simple_repeat 2 25 0 846 225 145 36 chr5 70254100 70254216 -132831316 - AluJo SINE Alu -142 169 7 824 203 23 10 chr5 70254757 70255084 -132830448 + MSTD LTR MaLR 1 396 0 244 371 40 32 chr5 70255785 70255909 -132829623 - L2 LINE L2 -9 3263 3139 263 320 115 0 chr5 70256262 70256384 -132829148 - L2 LINE L2 0 3313 3178 206 360 26 33 chr5 70256362 70256515 -132829017 - L2 LINE L2 -211 3061 2910 * 198 0 0 0 chr5 70256729 70256751 -132828781 + (CAAG)n Simple_repeat Simple_repeat 3 24 0 583 331 33 45 chr5 70256971 70257528 -132828004 - L2 LINE L2 0 3313 2536 259 320 28 55 chr5 70257719 70257900 -132827632 - L2 LINE L2 -477 2837 2662 21 71 0 0 chr5 70259299 70259341 -132826191 + AT_rich Low_complexity Low_complexity 1 42 0 22 111 0 0 chr5 70259674 70259773 -132825759 + AT_rich Low_complexity Low_complexity 1 99 0 186 322 195 17 chr5 70260951 70261069 -132824463 - L2 LINE L2 0 3272 3134 242 222 74 0 chr5 70261247 70261301 -132824231 - Charlie8 DNA MER1_type -1000 1417 1360 * 282 298 158 0 chr5 70261296 70261410 -132824122 - Charlie8 DNA MER1_type -2171 246 115 1571 189 55 23 chr5 70261451 70261794 -132823738 - MLT1A1 LTR MaLR -11 354 1 222 225 0 0 chr5 70262888 70262928 -132822604 + A-rich Low_complexity Low_complexity 4 43 0 230 241 72 12 chr5 70263267 70263350 -132822182 + L1ME LINE L1 5709 5796 -325 273 218 51 0 chr5 70263499 70263577 -132821955 - L1MC4 LINE L1 -1347 6695 6614 548 254 16 0 chr5 70264414 70264536 -132820996 - MER94 DNA DNA -5 129 6 741 227 30 120 chr5 70264536 70264902 -132820630 + L1MC4 LINE L1 7710 8042 0 2148 127 3 10 chr5 70266116 70266430 -132819102 + AluSx SINE Alu 1 312 0 2321 43 0 0 chr5 70266441 70266720 -132818812 + L1PA5 LINE L1 5864 6142 -12 408 20 0 0 chr5 70266720 70266769 -132818763 + (TA)n Simple_repeat Simple_repeat 1 49 0 866 109 0 58 chr5 70266863 70266900 -132818632 - L1MA7 LINE L1 0 6291 6253 2311 90 0 13 chr5 70266900 70267199 -132818333 + AluSc SINE Alu 1 295 -14 866 109 0 58 chr5 70267199 70267335 -132818197 - L1MA7 LINE L1 -38 6253 6128 26 0 0 0 chr5 70267397 70267423 -132818109 + AT_rich Low_complexity Low_complexity 1 26 0 13946 145 18 11 chr5 70267435 70269831 -132815701 - Tigger1 DNA MER2_type -1 2417 4 239 146 0 0 chr5 70269832 70269873 -132815659 - Tigger1 DNA MER2_type -2377 41 1 1183 309 67 29 chr5 70270394 70270612 -132814920 + L2 LINE L2 2610 2818 -495 2062 140 0 3 chr5 70270612 70270912 -132814620 - AluSx SINE Alu -11 301 3 1183 309 67 29 chr5 70270912 70271378 -132814154 + L2 LINE L2 2818 3313 0 924 220 12 0 chr5 70271403 70271576 -132813956 + MER5A DNA MER1_type 15 189 0 2550 215 32 66 chr5 70271831 70272483 -132813049 - MER21B LTR ERV1 -233 630 1 1117 180 57 0 chr5 70272484 70272712 -132812820 - MER67C LTR ERV1 -469 241 1 189 107 0 0 chr5 70272885 70272913 -132812619 + (ATG)n Simple_repeat Simple_repeat 3 30 0 441 223 168 65 chr5 70272922 70273147 -132812385 - MIR SINE MIR -15 247 16 4870 41 5 0 chr5 70273271 70273854 -132811678 + LTR10C LTR ERV1 1 586 -5 241 303 32 67 chr5 70274975 70275129 -132810403 - MIR SINE MIR -32 176 17 2147 123 18 6 chr5 70275154 70275487 -132810045 + MER1B DNA MER1_type 1 337 0 1218 79 0 36 chr5 70275771 70275967 -132809565 - AluSc SINE Alu 0 310 121 544 217 76 13 chr5 70276508 70276665 -132808867 - MER53 DNA DNA -16 173 7 235 362 85 7 chr5 70276881 70277022 -132808510 + MIR3 SINE MIR 45 196 -12 1102 245 135 0 chr5 70277280 70277562 -132807970 - MER67D LTR ERV1 -4 510 191 326 121 0 17 chr5 70277562 70277620 -132807912 + (TA)n Simple_repeat Simple_repeat 2 58 0 334 259 199 52 chr5 70277648 70278054 -132807478 + L1M4 LINE L1 2678 3143 -3003 284 184 184 56 chr5 70278219 70278344 -132807188 - MIR SINE MIR -6 256 116 229 167 77 64 chr5 70278663 70278741 -132806791 + L1M4 LINE L1 4672 4750 -1396 1464 181 117 22 chr5 70278746 70279105 -132806427 + LTR52 LTR ERVL 1 393 -28 2189 57 0 7 chr5 70279163 70279444 -132806088 - L1PA8 LINE L1 0 6172 5894 195 167 0 0 chr5 70279801 70279843 -132805689 + GA-rich Low_complexity Low_complexity 1 42 0 27 92 0 0 chr5 70279988 70280064 -132805468 + AT_rich Low_complexity Low_complexity 1 76 0 313 202 70 26 chr5 70281976 70282090 -132803442 - MER113 DNA MER1_type? -384 137 19 2100 163 60 35 chr5 70282202 70282721 -132802811 + MLT2A2 LTR ERVL 1 554 0 380 305 102 25 chr5 70282749 70282946 -132802586 + MIR SINE MIR 32 243 -19 9090 243 64 27 chr5 70283116 70286125 -132799407 + L1ME1 LINE L1 19 2915 -3625 2183 112 7 0 chr5 70286125 70286420 -132799112 + AluSp SINE Alu 1 297 -16 9090 243 64 27 chr5 70286420 70288243 -132797289 + L1ME1 LINE L1 2915 5084 -1456 1639 161 0 0 chr5 70288243 70288485 -132797047 - AluSx SINE Alu -31 281 40 9090 243 64 27 chr5 70288485 70288620 -132796912 + L1ME1 LINE L1 5084 5213 -1327 2108 230 71 33 chr5 70288616 70289252 -132796280 + L1ME1 LINE L1 5896 6555 -5 * 523 239 0 99 chr5 70289275 70289417 -132796115 + MER5B DNA MER1_type 50 177 -1 26 0 0 0 chr5 70289864 70289890 -132795642 + AT_rich Low_complexity Low_complexity 1 26 0 813 250 5 0 chr5 70291777 70291965 -132793567 + MER5A DNA MER1_type 1 189 0 29 0 0 0 chr5 70294374 70294403 -132791129 + AT_rich Low_complexity Low_complexity 1 29 0 229 171 0 0 chr5 70295018 70295059 -132790473 + L2 LINE L2 3262 3302 -11 220 379 105 0 chr5 70295799 70295923 -132789609 - L2 LINE L2 0 3272 3136 721 246 152 0 chr5 70295923 70296114 -132789418 + MER58A DNA MER1_type 1 220 -4 618 246 71 79 chr5 70296312 70296564 -132788968 + MIR SINE MIR 10 259 -3 1005 304 102 53 chr5 70296605 70297231 -132788301 - L2 LINE L2 -376 2938 2282 727 331 36 31 chr5 70297232 70297327 -132788205 - MLT1I LTR MaLR -49 360 267 1429 221 46 30 chr5 70297327 70297694 -132787838 - MLT1A2 LTR MaLR -1 373 1 727 331 36 31 chr5 70297694 70297954 -132787578 - MLT1I LTR MaLR -142 267 3 2236 175 59 18 chr5 70298057 70298496 -132787036 + LTR32 LTR ERVL 15 471 0 256 175 35 0 chr5 70298734 70298791 -132786741 - L1ME LINE L1 -302 5819 5761 4848 146 28 5 chr5 70298874 70299671 -132785861 - L1PA15 LINE L1 -5 6160 5346 21 0 0 0 chr5 70299963 70299984 -132785548 + AT_rich Low_complexity Low_complexity 1 21 0 185 353 0 0 chr5 70300258 70300309 -132785223 + L2 LINE L2 3210 3260 -12 255 274 42 11 chr5 70300410 70300505 -132785027 - L3 LINE CR1 -1 1576 1479 2247 124 39 17 chr5 70302599 70302955 -132782577 + THE1B LTR MaLR 1 364 0 731 278 64 79 chr5 70303031 70303498 -132782034 + LTR16B LTR ERVL 4 463 -1 1534 217 30 19 chr5 70304225 70304593 -132780939 - L1ME1 LINE L1 -176 5990 5619 482 294 76 25 chr5 70304702 70304977 -132780555 - HAL1 LINE L1 -813 1694 1406 379 233 57 99 chr5 70305005 70305319 -132780213 - L1MEd LINE L1 -5005 1114 814 709 382 56 19 chr5 70307682 70308310 -132777222 - L2 LINE L2 -345 2969 2319 452 346 10 34 chr5 70309074 70309279 -132776253 - MIR3 SINE MIR 0 208 9 957 215 43 0 chr5 70309545 70309754 -132775778 + MER20 DNA MER1_type 2 219 0 1691 160 0 72 chr5 70309795 70310127 -132775405 + AluJo SINE Alu 2 309 -3 444 319 7 7 chr5 70310433 70310574 -132774958 + MIR SINE MIR 110 250 -12 261 292 69 0 chr5 70310590 70310662 -132774870 - MIR3 SINE MIR -21 187 111 2483 111 6 0 chr5 70310797 70311150 -132774382 + THE1A LTR MaLR 1 355 0 22 80 0 0 chr5 70312888 70312938 -132772594 + AT_rich Low_complexity Low_complexity 1 50 0 32 0 0 0 chr5 70313530 70313562 -132771970 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr5 70313591 70313615 -132771917 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 215 77 0 26 chr5 70314150 70314189 -132771343 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 21 0 0 0 chr5 70315193 70315214 -132770318 + AT_rich Low_complexity Low_complexity 1 21 0 484 299 111 57 chr5 70315384 70315556 -132769976 - LTR33 LTR ERVL -63 458 297 2067 123 0 35 chr5 70315556 70315866 -132769666 + AluSg SINE Alu 1 299 -11 484 299 111 57 chr5 70315866 70315975 -132769557 - LTR33 LTR ERVL -224 297 195 3776 63 20 2 chr5 70315975 70316479 -132769053 - LTR10D LTR ERV1 0 513 1 484 299 111 57 chr5 70316479 70316600 -132768932 - LTR33 LTR ERVL -326 195 33 1353 148 0 14 chr5 70317003 70317219 -132768313 - AluJb SINE Alu -15 297 85 330 67 0 0 chr5 70318549 70318594 -132766938 + (CA)n Simple_repeat Simple_repeat 1 45 0 242 287 59 20 chr5 70318833 70318934 -132766598 - L2 LINE L2 -4 3309 3205 542 264 27 26 chr5 70319612 70319816 -132765716 + L1ME4a LINE L1 5539 5743 -378 336 196 290 9 chr5 70319845 70320059 -132765473 + L1ME4a LINE L1 5815 6088 -33 246 116 0 0 chr5 70320065 70320108 -132765424 + (CA)n Simple_repeat Simple_repeat 2 44 0 607 297 66 29 chr5 70320663 70321044 -132764488 + L1ME1 LINE L1 25 419 -6004 2121 112 0 0 chr5 70321049 70321327 -132764205 + AluSg SINE Alu 19 296 -14 4326 265 59 36 chr5 70321397 70321884 -132763648 + L1ME1 LINE L1 992 1466 -5475 996 166 101 0 chr5 70321884 70322083 -132763449 - MER20 DNA MER1_type 0 219 1 4326 265 59 36 chr5 70322083 70325112 -132760420 + L1ME1 LINE L1 1466 4739 -2202 1608 267 12 20 chr5 70325113 70325608 -132759924 + L1ME1 LINE L1 6176 6666 -295 425 123 46 0 chr5 70325608 70325673 -132759859 + LTR1 LTR ERV1 718 785 0 1992 213 43 6 chr5 70325673 70326146 -132759386 + L1MC4a LINE L1 7311 8038 -4 8482 113 10 26 chr5 70326157 70327383 -132758149 + HSMAR1 DNA Mariner 3 1247 -40 1944 124 3 11 chr5 70327383 70327665 -132757867 + AluSx SINE Alu 3 282 -30 217 0 0 57 chr5 70327670 70327705 -132757827 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 8482 113 10 26 chr5 70327705 70327778 -132757754 + HSMAR1 DNA Mariner 1251 1287 0 3955 24 0 0 chr5 70328310 70328770 -132756762 - L1PA2 LINE L1 -1750 4396 3937 8371 30 0 0 chr5 70328770 70330535 -132754997 + L1PA2 LINE L1 4391 6155 0 192 77 0 0 chr5 70330567 70330593 -132754939 + (A)n Simple_repeat Simple_repeat 1 26 0 506 315 32 44 chr5 70330773 70331205 -132754327 - L1ME4a LINE L1 -213 5908 5482 582 41 0 0 chr5 70332051 70332124 -132753408 + (TG)n Simple_repeat Simple_repeat 2 74 0 456 263 19 17 chr5 70332630 70332762 -132752770 + MER5B DNA MER1_type 56 178 0 189 310 76 2 chr5 70334057 70334131 -132751401 + MIR SINE MIR 64 141 -67 752 184 65 74 chr5 70334369 70334586 -132750946 - MER20 DNA MER1_type -1 218 4 2569 113 11 5 chr5 70335494 70335867 -132749665 + THE1C LTR MaLR 1 375 0 3200 251 31 11 chr5 70336081 70337069 -132748463 + L1M4 LINE L1 3883 4890 -1256 1901 196 8 3 chr5 70337608 70337971 -132747561 + MLT1A1 LTR MaLR 1 365 0 21 57 0 0 chr5 70339521 70339556 -132745976 + AT_rich Low_complexity Low_complexity 1 35 0 758 167 72 44 chr5 70339875 70340055 -132745477 - AluJo SINE Alu -7 305 121 25 51 0 0 chr5 70340781 70340820 -132744712 + AT_rich Low_complexity Low_complexity 1 39 0 212 287 15 0 chr5 70345276 70345417 -132740115 + CT-rich Low_complexity Low_complexity 1 143 0 432 53 0 0 chr5 70345886 70345943 -132739589 + Alu SINE Alu 236 292 -20 273 216 255 0 chr5 70349289 70349391 -132736141 + MIR SINE MIR 74 201 -61 29 84 0 0 chr5 70350398 70350469 -132735063 + AT_rich Low_complexity Low_complexity 1 71 0 370 270 112 60 chr5 70350608 70350841 -132734691 - L1ME3A LINE L1 -248 5922 5678 454 274 158 27 chr5 70350870 70351016 -132734516 - MER5A DNA MER1_type -16 173 9 226 311 39 0 chr5 70351030 70351133 -132734399 - L1ME3A LINE L1 -523 5647 5541 1368 215 56 91 chr5 70351133 70351617 -132733915 + MLT1C LTR MaLR 1 467 0 470 278 114 15 chr5 70351807 70352149 -132733383 - L1MEd LINE L1 -3615 2514 2139 539 158 0 0 chr5 70352193 70352275 -132733257 + AluJ/FLAM SINE Alu 1 82 -230 393 307 113 33 chr5 70352657 70352869 -132732663 - L1MEd LINE L1 -4443 1727 1458 24 0 0 0 chr5 70352887 70352911 -132732621 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 70352926 70352948 -132732584 + AT_rich Low_complexity Low_complexity 1 22 0 370 255 56 61 chr5 70352964 70353302 -132732230 - L1MEd LINE L1 -4869 1441 1064 1093 172 0 6 chr5 70353303 70353483 -132732049 - AluJ SINE Alu 0 312 134 1957 145 3 3 chr5 70353483 70353786 -132731746 - AluSx SINE Alu -5 307 5 6398 97 21 6 chr5 70353793 70354895 -132730637 - L1PA8 LINE L1 0 6172 5065 13326 121 3 4 chr5 70354893 70356948 -132728584 + L1P LINE L1 2224 4276 -1870 258 192 19 0 chr5 70356949 70357001 -132728531 - AluJ SINE Alu -169 133 81 1094 270 34 30 chr5 70357003 70357470 -132728062 - L1MEd LINE L1 -5047 1072 604 511 344 79 6 chr5 70357577 70357894 -132727638 - L1MEd LINE L1 -5731 388 49 190 310 70 10 chr5 70357942 70358042 -132727490 + MIR SINE MIR 150 255 -7 37134 89 12 7 chr5 70358054 70364169 -132721363 - L1PA6 LINE L1 -2 6152 11 356 284 127 8 chr5 70365184 70365318 -132720214 - MIR SINE MIR -5 257 108 255 361 52 0 chr5 70366046 70366143 -132719389 - L2 LINE L2 0 3272 3171 476 323 43 49 chr5 70366286 70366633 -132718899 - L2 LINE L2 -72 3241 2897 199 268 268 7 chr5 70366752 70366890 -132718642 - L2 LINE L2 -341 2973 2800 2351 84 0 0 chr5 70367642 70367929 -132717603 + AluSp SINE Alu 1 287 -26 361 291 68 10 chr5 70367946 70368049 -132717483 + MER5B DNA MER1_type 65 173 -5 501 313 12 18 chr5 70368411 70368574 -132716958 - MER5A DNA MER1_type -2 187 26 194 179 18 0 chr5 70369293 70369349 -132716183 + (TTCA)n Simple_repeat Simple_repeat 2 58 0 519 303 46 42 chr5 70369385 70369626 -132715906 - LTR16C LTR ERVL -13 478 237 211 333 131 10 chr5 70369904 70370003 -132715529 - L2 LINE L2 -28 3244 3134 398 298 49 82 chr5 70370444 70370689 -132714843 - L2 LINE L2 0 3272 3036 233 392 42 0 chr5 70370875 70370995 -132714537 + L2 LINE L2 2951 3075 -197 195 42 0 0 chr5 70371233 70371257 -132714275 + (TC)n Simple_repeat Simple_repeat 2 25 0 810 284 47 20 chr5 70371607 70371861 -132713671 - MIR SINE MIR 0 262 2 986 183 40 22 chr5 70371923 70372147 -132713385 - MER30 DNA MER1_type -2 228 1 248 306 31 9 chr5 70372940 70373100 -132712432 - MIR SINE MIR -7 255 44 257 283 9 19 chr5 70373332 70373438 -132712094 - MLT1L LTR MaLR -15 600 496 714 319 137 23 chr5 70373672 70374373 -132711159 + L1ME LINE L1 3878 4658 -1488 489 284 65 47 chr5 70374373 70374914 -132710618 + L1ME LINE L1 5174 5728 -434 1116 333 115 76 chr5 70376212 70376741 -132708791 - L1MC4 LINE L1 0 8042 7493 24 0 0 0 chr5 70376907 70376931 -132708601 + AT_rich Low_complexity Low_complexity 1 24 0 429 263 8 23 chr5 70377052 70377185 -132708347 - HAL1b LINE L1 -768 580 450 22 0 0 0 chr5 70378062 70378084 -132707448 + AT_rich Low_complexity Low_complexity 1 22 0 541 280 51 5 chr5 70379608 70379879 -132705653 + LTR16C LTR ERVL 179 491 0 346 336 34 20 chr5 70380186 70380335 -132705197 + MIR3 SINE MIR 58 208 0 2371 75 0 28 chr5 70380409 70380729 -132704803 + AluY SINE Alu 1 311 0 494 320 82 32 chr5 70382311 70382530 -132703002 + MIR SINE MIR 7 236 -26 292 294 12 0 chr5 70384075 70384160 -132701372 - MARNA DNA Mariner -27 559 474 24 32 0 0 chr5 70386036 70386067 -132699465 + AT_rich Low_complexity Low_complexity 1 31 0 426 312 34 67 chr5 70386189 70386458 -132699074 + L1MC4 LINE L1 7630 7889 -153 396 311 110 9 chr5 70387020 70387248 -132698284 - MIR SINE MIR 0 262 12 435 348 115 13 chr5 70388987 70389329 -132696203 - MER115 DNA AcHobo -260 433 34 1191 164 103 17 chr5 70389988 70390274 -132695258 - MER61B LTR ERV1 -28 396 1 375 41 0 0 chr5 70390456 70390505 -132695027 + (TG)n Simple_repeat Simple_repeat 2 50 0 207 100 0 0 chr5 70391063 70391093 -132694439 + (TG)n Simple_repeat Simple_repeat 2 31 0 368 143 12 0 chr5 70391093 70391177 -132694355 + GA-rich Low_complexity Low_complexity 2 86 0 218 122 0 20 chr5 70391245 70391294 -132694238 + (GA)n Simple_repeat Simple_repeat 2 49 0 5039 132 34 47 chr5 70391312 70392219 -132693313 - MER4D LTR ERV1 -4 899 5 316 282 12 0 chr5 70444272 70444357 -132641175 + MARNA DNA Mariner 474 559 -27 481 324 82 32 chr5 70445902 70446121 -132639411 - MIR SINE MIR -26 236 7 2371 75 0 28 chr5 70447740 70448060 -132637472 - AluY SINE Alu 0 311 1 368 333 27 20 chr5 70448134 70448284 -132637248 - MIR3 SINE MIR 0 208 58 541 280 51 5 chr5 70448591 70448862 -132636670 - LTR16C LTR ERVL 0 491 179 22 0 0 0 chr5 70450385 70450407 -132635125 + AT_rich Low_complexity Low_complexity 1 22 0 346 280 131 70 chr5 70450878 70451381 -132634151 + HAL1b LINE L1 47 580 -768 24 32 0 0 chr5 70451771 70451802 -132633730 + AT_rich Low_complexity Low_complexity 1 31 0 360 288 38 64 chr5 70451924 70452191 -132633341 + L1MC4 LINE L1 7630 7889 -153 396 311 110 9 chr5 70452752 70452980 -132632552 - MIR SINE MIR 0 262 12 5039 132 34 47 chr5 70455402 70456309 -132629223 + MER4D LTR ERV1 5 899 -4 388 170 4 20 chr5 70456327 70456503 -132629029 + CT-rich Low_complexity Low_complexity 1 196 0 195 42 0 0 chr5 70456503 70456527 -132629005 + (TC)n Simple_repeat Simple_repeat 2 25 0 207 100 0 0 chr5 70456527 70456557 -132628975 + (CA)n Simple_repeat Simple_repeat 2 31 0 339 44 0 0 chr5 70457115 70457160 -132628372 + (CA)n Simple_repeat Simple_repeat 2 46 0 1191 164 103 17 chr5 70457342 70457628 -132627904 + MER61B LTR ERV1 1 396 -28 435 348 115 13 chr5 70458287 70458629 -132626903 + MER115 DNA AcHobo 34 433 -260 1884 172 84 19 chr5 70458643 70459109 -132626423 + LTR54B LTR ERV1 1 496 -2 2670 85 16 14 chr5 70459476 70459839 -132625693 + THE1B LTR MaLR 1 364 0 362 57 19 0 chr5 70463287 70463340 -132622192 + (CA)n Simple_repeat Simple_repeat 1 54 0 221 275 70 70 chr5 70463535 70463553 -132621979 - L2 LINE L2 -5 3308 3291 1576 207 64 6 chr5 70463553 70463896 -132621636 - MLT1A1 LTR MaLR 0 365 3 221 275 70 70 chr5 70463896 70464019 -132621513 - L2 LINE L2 -21 3292 3167 271 234 5 0 chr5 70465093 70465161 -132620371 + MIR SINE MIR 89 159 -49 240 273 30 0 chr5 70465838 70465904 -132619628 - MIR SINE MIR -105 157 90 702 285 68 72 chr5 70466627 70467154 -132618378 - MLT1H1 LTR MaLR 0 555 31 226 218 208 53 chr5 70467415 70467546 -132617986 + MIR SINE MIR 42 184 -62 269 348 52 26 chr5 70468110 70468265 -132617267 + MER117 DNA MER1_type 16 174 -23 499 290 71 53 chr5 70468623 70468788 -132616744 - L1ME4a LINE L1 -246 5875 5714 2448 192 64 41 chr5 70468788 70469396 -132616136 + MLT1E3 LTR MaLR 3 624 0 499 290 71 53 chr5 70469396 70469440 -132616092 - L1ME4a LINE L1 -407 5714 5672 2163 114 3 0 chr5 70469440 70469737 -132615795 - AluSx SINE Alu -14 298 1 499 290 71 53 chr5 70469737 70469919 -132615613 - L1ME4a LINE L1 -449 5672 5476 234 318 0 0 chr5 70469937 70470044 -132615488 - L1P LINE L1 -1089 5057 4951 28 61 0 0 chr5 70470061 70470110 -132615422 + AT_rich Low_complexity Low_complexity 1 49 0 1399 287 14 54 chr5 70470630 70471114 -132614418 + MLT1J LTR MaLR 44 508 -3 1963 122 43 45 chr5 70472560 70472936 -132612596 + THE1C LTR MaLR 1 375 0 2710 195 109 30 chr5 70473537 70473834 -132611698 + L1MD2 LINE L1 4461 4733 -1413 2293 104 3 10 chr5 70473834 70474143 -132611389 + AluSg SINE Alu 1 307 -3 2710 195 109 30 chr5 70474143 70474589 -132610943 + L1MD2 LINE L1 4733 5263 -883 1331 158 27 96 chr5 70474584 70474950 -132610582 + L1MB8 LINE L1 5833 6173 -5 * 264 30 0 0 chr5 70475084 70475117 -132610415 + (CA)n Simple_repeat Simple_repeat 2 34 0 614 287 41 15 chr5 70476920 70477115 -132608417 - MIR SINE MIR -62 200 1 318 26 0 0 chr5 70477472 70477511 -132608021 + (CA)n Simple_repeat Simple_repeat 2 40 0 227 314 145 17 chr5 70478470 70478642 -132606890 + MIR SINE MIR 65 258 -4 3236 235 46 24 chr5 70481384 70482261 -132603271 + L1MD2 LINE L1 5450 6345 -14 267 326 18 15 chr5 70482366 70482522 -132603010 - MLT1L LTR MaLR -56 532 376 31 0 0 0 chr5 70483409 70483440 -132602092 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr5 70484446 70484470 -132601062 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 789 287 40 13 chr5 70484820 70485123 -132600409 - L1ME4a LINE L1 -237 5884 5574 24 32 0 0 chr5 70485132 70485163 -132600369 + AT_rich Low_complexity Low_complexity 1 31 0 36 53 0 0 chr5 70485340 70485397 -132600135 + AT_rich Low_complexity Low_complexity 1 57 0 376 380 39 13 chr5 70485812 70486041 -132599491 - MIR SINE MIR -27 235 1 183 80 0 0 chr5 70486053 70486078 -132599454 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 236 294 70 79 chr5 70486085 70486299 -132599233 - L2 LINE L2 -19 3294 3083 2346 134 86 2 chr5 70486303 70486698 -132598834 + MSTA LTR MaLR 1 428 0 8945 176 31 4 chr5 70486699 70488292 -132597240 + MSTA-int LTR MaLR 3 1637 -14 291 323 38 15 chr5 70488294 70488306 -132597226 - L2 LINE L2 -223 3090 3080 2449 147 39 7 chr5 70488306 70488721 -132596811 + MSTA LTR MaLR 1 428 0 291 323 38 15 chr5 70488721 70488841 -132596691 - L2 LINE L2 -233 3080 2955 1711 168 24 0 chr5 70489271 70489562 -132595970 - AluJo SINE Alu -6 306 9 461 289 124 27 chr5 70489901 70490126 -132595406 - MIR SINE MIR -14 248 2 20335 176 25 4 chr5 70490255 70490329 -132595203 + L1M1 LINE L1 16 87 -7553 294 29 0 0 chr5 70490329 70490364 -132595168 + (CA)n Simple_repeat Simple_repeat 2 36 0 20335 176 25 4 chr5 70490364 70495161 -132590371 + L1M1 LINE L1 87 5072 -2568 1685 125 64 67 chr5 70495161 70495474 -132590058 + AluSx SINE Alu 1 312 0 20335 176 25 4 chr5 70495474 70497340 -132588192 + L1M1 LINE L1 5072 6897 -743 1046 265 47 50 chr5 70497342 70497863 -132587669 + PABL_B LTR ERV1 1 663 -4 5736 86 11 11 chr5 70497865 70498692 -132586840 + L1MA1 LINE L1 5476 6302 0 2025 248 61 41 chr5 70499610 70500372 -132585160 + LTR27 LTR ERV1 2 506 -130 244 246 16 0 chr5 70500361 70500422 -132585110 + MER52A LTR ERV1 1612 1673 -82 * 248 236 178 40 chr5 70500841 70501015 -132584517 + L1MC4 LINE L1 7566 7763 -279 197 83 28 0 chr5 70501480 70501516 -132584016 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1969 142 0 0 chr5 70501522 70501833 -132583699 - AluY SINE Alu 0 311 1 227 200 43 43 chr5 70502514 70502584 -132582948 - L2 LINE L2 -4 3309 3240 267 93 0 0 chr5 70502727 70502770 -132582762 + (CA)n Simple_repeat Simple_repeat 2 44 0 1157 232 75 16 chr5 70503220 70503526 -132582006 + MLT2B1 LTR ERVL 1 324 -196 371 154 8 23 chr5 70503588 70503718 -132581814 + (TA)n Simple_repeat Simple_repeat 2 129 0 255 125 0 0 chr5 70503740 70503780 -132581752 + MLT2B1 LTR ERVL 473 512 -8 23 68 0 0 chr5 70504601 70504645 -132580887 + AT_rich Low_complexity Low_complexity 1 44 0 815 146 0 23 chr5 70504650 70504780 -132580752 + FLAM_C SINE Alu 3 129 -4 978 260 59 0 chr5 70505069 70505288 -132580244 + MIR SINE MIR 1 232 -30 226 276 76 9 chr5 70506829 70506934 -132578598 - MIR SINE MIR -24 238 127 724 200 0 29 chr5 70507337 70507477 -132578055 + AluJo SINE Alu 1 136 -176 1264 114 47 11 chr5 70507608 70507921 -132577611 + THE1C LTR MaLR 1 375 0 10726 104 16 28 chr5 70507921 70509519 -132576013 + THE1C-int LTR MaLR 1 1580 0 1065 98 51 14 chr5 70509519 70509832 -132575700 + THE1C LTR MaLR 1 375 0 279 336 9 28 chr5 70509832 70509939 -132575593 - L2 LINE L2 -27 3286 3182 1279 268 92 31 chr5 70510666 70511147 -132574385 + L2 LINE L2 2804 3313 0 2072 156 22 6 chr5 70511937 70512296 -132573236 - MER47A DNA MER2_type -1 365 1 2920 153 64 7 chr5 70512613 70513193 -132572339 - L1MB1 LINE L1 -211 5957 5345 239 139 0 0 chr5 70513192 70513235 -132572297 + L1M LINE L1 5254 5296 -995 * 23 0 0 0 chr5 70513279 70513302 -132572230 + AT_rich Low_complexity Low_complexity 1 23 0 558 184 0 0 chr5 70513320 70513434 -132572098 - L1MB1 LINE L1 -850 5296 5183 194 128 26 0 chr5 70513786 70513825 -132571707 + GA-rich Low_complexity Low_complexity 1 40 0 2269 215 119 38 chr5 70514461 70515225 -132570307 + LTR1B LTR ERV1 1 826 0 473 336 19 33 chr5 70515455 70515726 -132569806 + L1MDa LINE L1 55 321 -6219 1694 167 187 51 chr5 70515804 70516205 -132569327 + MLT2B2 LTR ERVL 1 471 -44 306 0 0 0 chr5 70516205 70516239 -132569293 + (TG)n Simple_repeat Simple_repeat 1 34 0 1694 167 187 51 chr5 70516239 70516286 -132569246 + MLT2B2 LTR ERVL 471 510 -5 276 320 10 0 chr5 70516286 70516386 -132569146 + L1ME LINE L1 5786 5886 -284 3697 144 25 49 chr5 70516396 70517088 -132568444 + LTR8 LTR ERV1 1 675 -16 2016 109 0 4 chr5 70517262 70517529 -132568003 - AluSg SINE Alu -9 301 36 354 226 28 0 chr5 70517598 70517704 -132567828 + L1MC/D LINE L1 3702 3810 -2336 312 282 113 24 chr5 70517771 70517895 -132567637 + L1MC/D LINE L1 3802 3936 -2210 593 169 8 31 chr5 70518180 70518310 -132567222 + LTR59 LTR ERV1 1 127 -470 438 282 20 36 chr5 70518551 70518746 -132566786 - MLT1J LTR MaLR -317 194 3 255 302 73 37 chr5 70518748 70519459 -132566073 + L1P5 LINE L1 4751 5507 -644 427 344 52 62 chr5 70519460 70519768 -132565764 + L1MC/D LINE L1 5514 5818 -1990 2081 191 41 35 chr5 70520179 70520641 -132564891 + MLT1C LTR MaLR 3 467 0 357 314 88 84 chr5 70520988 70521284 -132564248 - L2 LINE L2 -40 3232 2936 209 324 142 32 chr5 70521411 70521664 -132563868 - L2 LINE L2 -622 2692 2412 597 342 72 9 chr5 70521698 70522017 -132563515 - L2 LINE L2 -1160 2154 1816 4308 124 9 3 chr5 70522258 70522933 -132562599 - L1PB4 LINE L1 -6 6150 5472 737 172 31 0 chr5 70523244 70523372 -132562160 + FLAM_C SINE Alu 2 133 0 199 0 0 61 chr5 70523378 70523411 -132562121 + (TA)n Simple_repeat Simple_repeat 1 31 0 1116 171 104 93 chr5 70523685 70524000 -132561532 + AluJb SINE Alu 2 319 0 26 30 0 0 chr5 70524331 70524364 -132561168 + AT_rich Low_complexity Low_complexity 1 33 0 2175 112 0 3 chr5 70524439 70524725 -132560807 + AluSx SINE Alu 1 285 -27 228 148 40 20 chr5 70524725 70524826 -132560706 + (TA)n Simple_repeat Simple_repeat 2 104 0 1846 113 4 25 chr5 70525582 70525856 -132559676 + AluSg SINE Alu 38 305 -5 2093 58 0 15 chr5 70527283 70527557 -132557975 + AluY SINE Alu 1 270 -41 1639 100 17 13 chr5 70527658 70527897 -132557635 - AluSg SINE Alu -70 240 1 1630 199 7 0 chr5 70527928 70528210 -132557322 + AluJb SINE Alu 4 287 -25 2259 247 42 23 chr5 70528306 70528491 -132557041 - L1ME2 LINE L1 -108 6336 6156 1617 69 0 10 chr5 70528491 70528693 -132556839 - AluSg/x SINE Alu -2 310 111 2259 247 42 23 chr5 70528693 70529754 -132555778 - L1ME2 LINE L1 -288 6156 5061 313 313 43 0 chr5 70529754 70529881 -132555651 - L1ME2 LINE L1 -4657 1769 1490 360 0 0 0 chr5 70529884 70529924 -132555608 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 4454 160 23 26 chr5 70529924 70531122 -132554410 - L1PA16 LINE L1 -25 7560 6364 1401 139 30 4 chr5 70531140 70531407 -132554125 - L1MA2 LINE L1 -65 6239 5966 * 16210 157 32 17 chr5 70531400 70532041 -132553491 - L1PA16 LINE L1 -4570 2995 2365 2443 122 8 13 chr5 70532041 70532418 -132553114 + THE1C LTR MaLR 1 375 0 16210 157 32 17 chr5 70532418 70534712 -132550820 - L1PA16 LINE L1 -5200 2365 16 4821 208 29 25 chr5 70534716 70536073 -132549459 - L1PA15-16 LINE L1 -3753 3096 1735 505 276 49 0 chr5 70536193 70536316 -132549216 - MIR SINE MIR -113 149 21 40694 53 2 1 chr5 70536400 70542542 -132542990 + L1PA4 LINE L1 1 6150 -5 25 0 0 0 chr5 70543226 70543251 -132542281 + AT_rich Low_complexity Low_complexity 1 25 0 1784 256 74 21 chr5 70545000 70545578 -132539954 - MLT1E2 LTR MaLR -17 609 1 1118 313 96 62 chr5 70546049 70547283 -132538249 - HERV16 LTR ERVL -1731 4033 2758 1176 318 24 36 chr5 70547490 70548268 -132537264 - HERV16 LTR ERVL -2873 2123 1665 933 178 181 4 chr5 70548339 70548609 -132536923 - MER33 DNA MER1_type 0 324 7 287 269 34 136 chr5 70548625 70548889 -132536643 - LTR16A1 LTR ERVL -195 262 26 327 241 312 0 chr5 70549164 70549305 -132536227 + MER5A DNA MER1_type 5 189 0 27201 37 2 0 chr5 70550138 70554403 -132531129 + L1PA4 LINE L1 2892 7574 0 32 26 0 0 chr5 70554403 70554442 -132531090 + AT_rich Low_complexity Low_complexity 1 39 0 371 327 0 19 chr5 70554757 70554864 -132530668 + MIR SINE MIR 49 153 -109 359 333 18 30 chr5 70554885 70555053 -132530479 + L3 LINE CR1 1184 1349 -228 10746 52 3 0 chr5 70555053 70556469 -132529063 - L1PA4 LINE L1 -1228 4918 3498 7130 40 8 8 chr5 70556469 70557721 -132527811 + L1PA4 LINE L1 4904 6155 0 493 325 61 22 chr5 70557721 70557952 -132527580 + L3 LINE CR1 1337 1576 -1 371 190 38 0 chr5 70560742 70560821 -132524711 + MLT1G1 LTR MaLR 6 87 -508 6264 190 19 36 chr5 70560851 70562117 -132523415 + L1P LINE L1 2447 3683 -2463 354 23 0 0 chr5 70562117 70562160 -132523372 + (CA)n Simple_repeat Simple_repeat 2 44 0 6264 190 19 36 chr5 70562160 70562429 -132523103 + L1P LINE L1 3683 3955 -2191 811 190 45 48 chr5 70563095 70563364 -132522168 + MER69 DNA AcHobo 2168 2435 -91 21 36 0 0 chr5 70563496 70563524 -132522008 + AT_rich Low_complexity Low_complexity 1 28 0 194 273 61 0 chr5 70563699 70563765 -132521767 - L2 LINE L2 0 3272 3203 723 307 171 24 chr5 70563804 70564218 -132521314 - MLT1K LTR MaLR -3 585 111 935 211 39 10 chr5 70564433 70564637 -132520895 + MER63A DNA MER1_type 1 210 0 3955 224 25 25 chr5 70565388 70566663 -132518869 + L1MCb LINE L1 1 1284 -4853 2229 149 22 0 chr5 70566737 70567093 -132518439 + THE1B LTR MaLR 1 364 0 207 0 0 0 chr5 70568016 70568039 -132517493 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1863 114 12 0 chr5 70568043 70568298 -132517234 - AluSx SINE Alu -33 279 22 673 324 79 33 chr5 70569648 70570172 -132515360 + L2 LINE L2 2467 3029 -243 937 214 35 0 chr5 70570580 70570753 -132514779 - MER5A DNA MER1_type -10 179 1 320 366 8 24 chr5 70570896 70571019 -132514513 + MIR3 SINE MIR 87 207 -1 3144 130 54 27 chr5 70571279 70571832 -132513700 - L1PA16 LINE L1 -11 6155 5588 231 141 94 0 chr5 70573147 70573211 -132512321 - MLT1G LTR MaLR -2 588 519 709 242 63 21 chr5 70574648 70574838 -132510694 - MIR SINE MIR 0 262 65 2349 213 61 38 chr5 70575673 70576393 -132509139 - MER99 DNA DNA -90 738 2 2953 214 38 26 chr5 70577165 70577441 -132508091 - L1ME1 LINE L1 -5 6230 5959 2213 120 20 0 chr5 70577441 70577741 -132507791 - AluSg SINE Alu -3 307 2 2953 214 38 26 chr5 70577741 70578437 -132507095 - L1ME1 LINE L1 -276 5959 5250 40675 36 21 1 chr5 70578501 70584534 -132500998 - L1PA2 LINE L1 0 6155 3 324 219 12 0 chr5 70584541 70584623 -132500909 - L1ME1 LINE L1 -997 5218 5136 240 85 170 21 chr5 70584661 70584708 -132500824 - MLT2B1 LTR ERVL 0 520 467 214 164 55 0 chr5 70584712 70584767 -132500765 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 305 333 0 0 chr5 70584783 70584873 -132500659 - L1MC4 LINE L1 -1339 6703 6614 1895 204 18 26 chr5 70584896 70585283 -132500249 - MLT2B1 LTR ERVL -135 385 2 1559 248 51 18 chr5 70585300 70585809 -132499723 - L1ME1 LINE L1 -1179 5036 4511 375 23 0 0 chr5 70585842 70585886 -132499646 + (TG)n Simple_repeat Simple_repeat 2 45 0 242 197 0 13 chr5 70585919 70585995 -132499537 - L1ME1 LINE L1 -5326 1070 996 518 223 37 27 chr5 70586014 70586202 -132499330 - L1ME1 LINE L1 -5451 945 756 1926 78 70 15 chr5 70586249 70586519 -132499013 - AluY SINE Alu -26 285 1 1147 244 7 7 chr5 70586519 70586814 -132498718 - L1ME1 LINE L1 -5630 766 472 11444 186 41 10 chr5 70586867 70589928 -132495604 + L1MB3 LINE L1 18 3178 -3204 1193 161 0 6 chr5 70589933 70590113 -132495419 + AluSx SINE Alu 1 179 -133 4411 190 31 32 chr5 70590114 70590205 -132495327 + L1MB3 LINE L1 4542 4632 -1787 1488 196 45 25 chr5 70590205 70590563 -132494969 - MLT1A1 LTR MaLR 0 365 1 4411 190 31 32 chr5 70590563 70591180 -132494352 + L1MB3 LINE L1 4632 5248 -1171 1996 137 64 19 chr5 70591180 70591539 -132493993 - THE1C LTR MaLR 0 375 1 4411 190 31 32 chr5 70591539 70592250 -132493282 + L1MB3 LINE L1 5248 5957 -462 3024 123 5 0 chr5 70592250 70592682 -132492850 + MER57B LTR ERV1 1 434 0 4411 190 31 32 chr5 70592682 70593145 -132492387 + L1MB3 LINE L1 5957 6419 0 380 319 53 53 chr5 70593157 70593364 -132492168 + L3 LINE CR1 1336 1542 -35 344 218 20 30 chr5 70593911 70594012 -132491520 - LTR33 LTR ERVL 0 521 422 614 298 64 9 chr5 70594059 70594277 -132491255 - LTR33 LTR ERVL -234 287 58 497 270 63 54 chr5 70594476 70594698 -132490834 + L2 LINE L2 3084 3307 -6 221 330 89 18 chr5 70595331 70595443 -132490089 - L2 LINE L2 -18 3295 3176 184 123 0 35 chr5 70595446 70595503 -132490029 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 1322 254 152 23 chr5 70596031 70596550 -132488982 + L2 LINE L2 2183 2768 -546 214 156 52 52 chr5 70596554 70596631 -132488901 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 224 264 6 0 chr5 70596635 70596809 -132488723 + (TG)n Simple_repeat Simple_repeat 2 176 0 300 253 0 24 chr5 70596812 70596895 -132488637 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 560 218 184 60 chr5 70596896 70597328 -132488204 + L2 LINE L2 2786 3294 -19 1661 185 3 12 chr5 70598097 70598426 -132487106 - L1PBb LINE L1 -5867 337 12 * 4744 181 10 2 chr5 70598398 70599308 -132486224 - L1PBa LINE L1 -5220 1643 727 5010 102 80 24 chr5 70599311 70600412 -132485120 + pTR5 LTR ERV1 743 2025 -413 313 255 10 0 chr5 70600412 70600510 -132485022 + LTR30 LTR ERV1 544 642 -80 1431 103 0 9 chr5 70600513 70600736 -132484796 + pTR5 LTR ERV1 172 392 -2046 3176 216 22 8 chr5 70600739 70601452 -132484080 - L1PBa LINE L1 -6139 724 2 1075 168 133 51 chr5 70601456 70601772 -132483760 + MER4A LTR ERV1 1 342 -322 425 127 262 16 chr5 70601827 70601953 -132483579 + MER4C LTR ERV1 291 447 -18 909 288 79 49 chr5 70602342 70602773 -132482759 + MLT1K LTR MaLR 3 446 -142 904 232 22 22 chr5 70602992 70603216 -132482316 + LTR10B LTR ERV1 324 547 0 22512 255 32 30 chr5 70603216 70610959 -132474573 + HERVI LTR ERV1 2 6649 0 950 223 40 42 chr5 70611101 70611385 -132474147 + LTR10B LTR ERV1 261 547 0 410 246 119 8 chr5 70611389 70611515 -132474017 + MLT1K LTR MaLR 449 588 0 1018 240 47 4 chr5 70611593 70611826 -132473706 - MIR SINE MIR 0 262 20 22 0 0 0 chr5 70612163 70612185 -132473347 + AT_rich Low_complexity Low_complexity 1 22 0 514 250 176 0 chr5 70612607 70612755 -132472777 - MER5B DNA MER1_type -4 174 1 466 176 229 7 chr5 70612776 70612929 -132472603 - MER53 DNA DNA -1 188 2 1265 242 43 43 chr5 70613101 70613448 -132472084 - MLT1E2 LTR MaLR -279 347 1 711 239 189 32 chr5 70613511 70613854 -132471678 - HAL1 LINE L1 -794 1713 1317 1923 199 46 11 chr5 70613912 70614390 -132471142 - L1M4 LINE L1 -1987 4861 4367 353 300 83 86 chr5 70615103 70615728 -132469804 - L1M4 LINE L1 -5595 1254 573 293 327 78 20 chr5 70616095 70616248 -132469284 - MIR SINE MIR -71 191 30 205 303 30 20 chr5 70617245 70617344 -132468188 + MIR SINE MIR 118 217 -45 868 289 63 38 chr5 70617437 70617880 -132467652 + MARNA DNA Mariner 80 533 -53 1542 194 131 11 chr5 70618229 70618672 -132466860 - LTR54B LTR ERV1 -2 496 1 3826 233 35 19 chr5 70618672 70619598 -132465934 - MER110-int LTR ERV1 -393 7144 6205 924 176 85 6 chr5 70619936 70620112 -132465420 - MER110-int LTR ERV1 -762 4109 3920 565 354 46 41 chr5 70620169 70620893 -132464639 - MER110-int LTR ERV1 -1794 2853 2127 598 313 33 22 chr5 70622128 70622481 -132463051 - MER110-int LTR ERV1 -4093 2708 211 5686 170 35 40 chr5 70622749 70623137 -132462395 - L1MA6 LINE L1 0 7321 6933 2272 108 0 0 chr5 70623137 70623433 -132462099 - AluSg SINE Alu -14 296 1 5686 170 35 40 chr5 70623433 70624380 -132461152 - L1MA6 LINE L1 -388 6933 6011 2354 103 3 0 chr5 70624380 70624691 -132460841 - AluSx SINE Alu 0 312 1 5686 170 35 40 chr5 70624691 70625447 -132460085 - L1MA6 LINE L1 -1310 6011 5253 1753 162 83 17 chr5 70625452 70625860 -132459672 - L1MA6 LINE L1 -2547 4620 4186 269 189 75 0 chr5 70625882 70625935 -132459597 - L1MA6 LINE L1 -7108 60 4 247 382 22 53 chr5 70626610 70626835 -132458697 + L2 LINE L2 2861 3078 -194 306 50 0 0 chr5 70626951 70626991 -132458541 + (TA)n Simple_repeat Simple_repeat 2 41 0 1270 248 122 38 chr5 70627118 70627341 -132458191 - LTR33 LTR ERVL -4 517 314 2343 105 0 0 chr5 70627341 70627645 -132457887 + AluSc SINE Alu 1 304 -5 1270 248 122 38 chr5 70627645 70627897 -132457635 - LTR33 LTR ERVL -207 314 2 23 0 0 0 chr5 70628109 70628132 -132457400 + AT_rich Low_complexity Low_complexity 1 23 0 276 327 30 40 chr5 70628315 70628416 -132457116 - MER5B DNA MER1_type -77 101 2 35 24 0 0 chr5 70628613 70628655 -132456877 + AT_rich Low_complexity Low_complexity 1 42 0 1070 272 81 17 chr5 70629097 70629680 -132455852 - L1ME3 LINE L1 -336 5826 5201 229 83 111 0 chr5 70630399 70630435 -132455097 - MLT2A2 LTR ERVL 0 453 414 * 2124 128 22 33 chr5 70630433 70630841 -132454691 - MLT2A2 LTR ERVL -145 308 1 2275 68 4 4 chr5 70631494 70631774 -132453758 - AluY SINE Alu -9 302 23 458 194 51 0 chr5 70632693 70632791 -132452741 + MIR SINE MIR 97 199 -63 1968 148 7 0 chr5 70632947 70633251 -132452281 - AluSx SINE Alu -4 308 3 2128 155 8 50 chr5 70633392 70633793 -132451739 + MLT1B LTR MaLR 6 389 -1 551 205 62 41 chr5 70633896 70634091 -132451441 - L1MC5 LINE L1 -733 7228 7030 439 306 0 9 chr5 70634149 70634257 -132451275 + L1MEd LINE L1 498 604 -5515 762 286 124 12 chr5 70634369 70634748 -132450784 + L2 LINE L2 2128 2624 -690 23 54 0 0 chr5 70634829 70634866 -132450666 + AT_rich Low_complexity Low_complexity 1 37 0 1738 173 41 51 chr5 70637121 70637515 -132448017 + MLT1B LTR MaLR 1 390 0 1842 201 10 47 chr5 70637516 70638070 -132447462 + MLT1B-int LTR MaLR 2 652 -719 303 231 15 0 chr5 70638096 70638161 -132447371 + MLT1B-int LTR MaLR 819 884 -487 2017 218 52 19 chr5 70638396 70638859 -132446673 + MLT1B-int LTR MaLR 1256 1733 -2 1699 185 67 21 chr5 70638862 70639235 -132446297 + MLT1B LTR MaLR 1 390 0 1314 165 57 77 chr5 70639410 70639762 -132445770 - L1MC2 LINE L1 -8 6336 5992 2027 179 41 13 chr5 70639933 70640401 -132445131 - L1MA10 LINE L1 -827 5319 4839 4225 234 31 46 chr5 70640415 70640687 -132444845 + L1MA10 LINE L1 5297 5571 -763 2242 104 0 0 chr5 70640687 70640985 -132444547 + AluSg SINE Alu 2 299 -11 4225 234 31 46 chr5 70640985 70641232 -132444300 + L1MA10 LINE L1 5571 5820 -514 423 0 0 0 chr5 70641232 70641279 -132444253 + (TA)n Simple_repeat Simple_repeat 2 48 0 4225 234 31 46 chr5 70641279 70641811 -132443721 + L1MA10 LINE L1 5820 6334 0 7291 29 3 0 chr5 70642343 70643217 -132442315 - L1PA4 LINE L1 -2 6153 5280 367 179 54 89 chr5 70643235 70643347 -132442185 - L1ME3A LINE L1 -12 6158 6051 3165 169 38 7 chr5 70643837 70644387 -132441145 - MER6A DNA MER2_type 0 605 39 270 254 63 0 chr5 70644394 70644457 -132441075 - MER6A DNA MER2_type -538 67 1 865 270 42 73 chr5 70644497 70645208 -132440324 - L1 LINE L1 -1920 4226 3538 21 0 0 0 chr5 70645312 70645333 -132440199 + AT_rich Low_complexity Low_complexity 1 21 0 1830 218 100 14 chr5 70645661 70646161 -132439371 + Charlie1a DNA MER1_type 2 544 -911 223 355 11 0 chr5 70646193 70646281 -132439251 + MER5A DNA MER1_type 66 166 -23 320 231 8 127 chr5 70646287 70646378 -132439154 - L2 LINE L2 -273 3040 2968 868 197 190 0 chr5 70646378 70646647 -132438885 - MER33 DNA MER1_type -4 320 1 320 231 8 127 chr5 70646647 70646689 -132438843 - L2 LINE L2 -345 2968 2923 2307 90 0 7 chr5 70647159 70647459 -132438073 - AluSq SINE Alu -15 298 1 437 258 74 55 chr5 70647818 70647981 -132437551 + MER5B DNA MER1_type 13 178 0 269 377 38 0 chr5 70647996 70648102 -132437430 + L2 LINE L2 3157 3266 -6 1652 156 0 77 chr5 70648589 70648916 -132436616 + AluJo SINE Alu 1 302 -10 1689 85 0 5 chr5 70650190 70650402 -132435130 - AluSg/x SINE Alu -25 285 75 2283 246 86 1 chr5 70650498 70651194 -132434338 - L1ME2 LINE L1 -38 6126 5372 838 250 43 0 chr5 70651196 70651404 -132434128 - MIR SINE MIR -38 224 8 432 237 168 21 chr5 70651775 70651965 -132433567 - L1MB8 LINE L1 -16 6162 5945 21 57 0 0 chr5 70652020 70652055 -132433477 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 70652275 70652305 -132433227 + AT_rich Low_complexity Low_complexity 1 30 0 239 234 250 0 chr5 70652479 70652607 -132432925 - L1ME3A LINE L1 -230 5923 5764 505 278 152 4 chr5 70652668 70652898 -132432634 - L1ME3A LINE L1 -413 5740 5477 471 239 151 25 chr5 70652915 70653153 -132432379 - L1ME3A LINE L1 -773 5356 5089 304 301 124 72 chr5 70653163 70653372 -132432160 - L1ME3A LINE L1 -5646 473 254 440 342 100 17 chr5 70653970 70654271 -132431261 - L2 LINE L2 -961 2353 2028 304 273 164 36 chr5 70654473 70654583 -132430949 - MER91C DNA MER1_type -15 125 2 1280 232 108 6 chr5 70655054 70655407 -132430125 + MLT1B LTR MaLR 1 389 -1 42 86 0 0 chr5 70655503 70655608 -132429924 + AT_rich Low_complexity Low_complexity 1 105 0 470 326 143 10 chr5 70655737 70656103 -132429429 - L2 LINE L2 -265 3048 2630 23 33 0 0 chr5 70657372 70657402 -132428130 + AT_rich Low_complexity Low_complexity 1 30 0 238 215 31 15 chr5 70657576 70657641 -132427891 + MIR SINE MIR 194 259 -3 333 294 0 22 chr5 70657982 70658074 -132427458 - MER5A DNA MER1_type -98 91 2 282 200 120 82 chr5 70658580 70658607 -132426925 - MER34 LTR ERV1 -321 386 361 3236 117 27 83 chr5 70658607 70659246 -132426286 - LTR26 LTR ERV1 0 603 1 282 200 120 82 chr5 70659246 70659426 -132426106 - MER34 LTR ERV1 -346 361 1 216 97 0 0 chr5 70660151 70660182 -132425350 + (CA)n Simple_repeat Simple_repeat 2 32 0 247 194 56 0 chr5 70660184 70660256 -132425276 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 413 211 49 49 chr5 70660264 70660387 -132425145 + L2 LINE L2 3148 3270 -43 24 53 0 0 chr5 70664204 70664242 -132421290 + AT_rich Low_complexity Low_complexity 1 38 0 2398 201 72 88 chr5 70664603 70665377 -132420155 - L1MD2 LINE L1 -245 6114 5346 1644 153 4 35 chr5 70665377 70665638 -132419894 + AluJo SINE Alu 6 258 -54 2398 201 72 88 chr5 70665638 70665902 -132419630 - L1MD2 LINE L1 -1013 5346 5079 302 255 98 0 chr5 70666005 70666158 -132419374 - L1MD2 LINE L1 -3090 3056 2889 227 304 54 0 chr5 70667394 70667450 -132418082 + L2 LINE L2 3246 3304 -9 2303 142 14 12 chr5 70667456 70667872 -132417660 - L1MC3 LINE L1 -15 7770 7354 2531 197 78 2 chr5 70667872 70667959 -132417573 - MER68 LTR ERV1 0 562 483 833 37 19 0 chr5 70667959 70668066 -132417466 - L1PA4 LINE L1 -1 6154 6046 2531 197 78 2 chr5 70668066 70668500 -132417032 - MER68 LTR ERV1 -79 483 1 519 144 82 0 chr5 70668500 70668597 -132416935 - L1MC3 LINE L1 -427 7358 7254 2227 186 81 6 chr5 70668648 70669115 -132416417 - MLT1D LTR MaLR -3 502 1 554 266 176 5 chr5 70669116 70669315 -132416217 - MIR SINE MIR -25 237 5 285 333 0 11 chr5 70669416 70669503 -132416029 - L2 LINE L2 -1 3312 3227 378 0 0 0 chr5 70669733 70669775 -132415757 + (TG)n Simple_repeat Simple_repeat 2 43 0 186 313 15 0 chr5 70670206 70670273 -132415259 - MIR SINE MIR -10 252 185 807 208 141 76 chr5 70670400 70670741 -132414791 + MLT1A1 LTR MaLR 1 363 -2 1982 107 79 10 chr5 70670957 70671360 -132414172 + SVA Other Other 438 868 -518 6083 91 42 39 chr5 70671403 70672355 -132413177 + SVA Other Other 432 1386 0 281 132 57 0 chr5 70672355 70672408 -132413124 + MLT1D LTR MaLR 438 493 -12 203 0 37 0 chr5 70673480 70673507 -132412025 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1670 193 7 3 chr5 70673905 70674201 -132411331 + AluJb SINE Alu 1 297 -15 1983 159 0 10 chr5 70674588 70674897 -132410635 - AluJb SINE Alu -6 306 1 1449 221 66 52 chr5 70675898 70676396 -132409136 - MLT1D LTR MaLR 0 505 1 200 211 147 110 chr5 70677946 70678055 -132407477 - MER5A DNA MER1_type 0 189 77 465 125 0 0 chr5 70678082 70678146 -132407386 - FRAM SINE Alu -55 121 58 775 295 90 0 chr5 70678413 70678647 -132406885 - MIR SINE MIR 0 262 8 323 321 55 12 chr5 70678773 70678938 -132406594 + MIR SINE MIR 91 262 0 538 174 9 0 chr5 70679333 70679442 -132406090 + MER41A LTR ERV1 400 509 -45 182 339 81 40 chr5 70679652 70679776 -132405756 + MIR SINE MIR 2 130 -132 2033 127 3 3 chr5 70679858 70680149 -132405383 + AluSx SINE Alu 3 293 -19 2555 58 0 0 chr5 70680260 70680571 -132404961 - AluY SINE Alu 0 311 1 1701 176 3 23 chr5 70680672 70680973 -132404559 + AluJb SINE Alu 6 300 -12 1373 163 84 64 chr5 70681321 70681664 -132403868 + THE1C LTR MaLR 26 375 0 9639 128 8 46 chr5 70681667 70683306 -132402226 + MSTA-int LTR MaLR 4 1580 0 1409 138 157 106 chr5 70683306 70683713 -132401819 + MSTA LTR MaLR 1 428 0 3461 169 21 5 chr5 70683714 70684583 -132400949 - L1MB1 LINE L1 -213 5955 5077 389 293 293 0 chr5 70684876 70685016 -132400516 + MER5A DNA MER1_type 9 189 0 286 306 9 0 chr5 70685915 70686026 -132399506 - MER103 DNA DNA -36 130 19 802 327 124 19 chr5 70686300 70686679 -132398853 + L2 LINE L2 2827 3245 -68 268 242 66 11 chr5 70686961 70687052 -132398480 + MLT1L LTR MaLR 195 290 -325 1810 239 46 34 chr5 70687304 70687830 -132397702 + L1M3e LINE L1 511 1042 -6447 928 229 49 7 chr5 70687917 70688251 -132397281 + L1M3e LINE L1 2313 2665 -4831 424 254 76 5 chr5 70688264 70688449 -132397083 + L1M3e LINE L1 2497 2694 -4871 29172 115 12 61 chr5 70688470 70694938 -132390594 + L1PA7 LINE L1 13 6154 0 1226 185 59 11 chr5 70694946 70695233 -132390299 + L1M3e LINE L1 3020 3320 -4246 8208 161 91 109 chr5 70695237 70697118 -132388414 + L1M3e LINE L1 3645 5698 -1867 1064 184 94 30 chr5 70697118 70697352 -132388180 - AluJo SINE Alu -24 288 40 8208 161 91 109 chr5 70697352 70697962 -132387570 + L1M3e LINE L1 5698 6318 -1247 1168 185 59 0 chr5 70697964 70698250 -132387282 + L1MA8 LINE L1 5988 6290 -1 237 245 0 0 chr5 70699563 70699612 -132385920 + MIR SINE MIR 211 259 -3 21 0 0 0 chr5 70699627 70699648 -132385884 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 70700770 70700795 -132384737 + AT_rich Low_complexity Low_complexity 1 25 0 14780 38 0 2 chr5 70700878 70703448 -132382084 - L1PA5 LINE L1 0 6154 3584 794 47 0 0 chr5 70703448 70703555 -132381977 + L1P LINE L1 2522 2628 -3518 358 297 142 62 chr5 70703985 70704564 -132380968 - L2 LINE L2 -604 2710 2086 190 219 0 0 chr5 70704575 70704616 -132380916 - L2 LINE L2 -2430 884 844 234 0 0 0 chr5 70704705 70704731 -132380801 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2237 87 6 13 chr5 70705314 70705625 -132379907 + AluSp SINE Alu 1 309 -4 263 282 18 9 chr5 70705729 70705839 -132379693 + (TA)n Simple_repeat Simple_repeat 1 111 0 346 307 35 18 chr5 70705937 70706051 -132379481 - L1ME LINE L1 -297 5824 5709 234 327 20 40 chr5 70706170 70706271 -132379261 + MIR3 SINE MIR 93 191 -17 584 291 75 38 chr5 70706338 70706551 -132378981 + MIR SINE MIR 21 241 -21 1065 167 5 33 chr5 70707409 70707619 -132377913 - MER89 LTR ERV1 -1 558 355 184 382 10 49 chr5 70708668 70708770 -132376762 + MIR SINE MIR 8 105 -157 278 253 93 27 chr5 70708787 70708937 -132376595 + L1ME3A LINE L1 6003 6162 -8 654 280 124 0 chr5 70708937 70709123 -132376409 + MER63A DNA MER1_type 1 209 -1 323 292 108 8 chr5 70709530 70709660 -132375872 - L1ME3A LINE L1 -219 5951 5809 8593 97 8 1 chr5 70709896 70711917 -132373615 - L1PA8 LINE L1 -5 6167 4132 855 219 70 86 chr5 70712498 70712813 -132372719 + MER46C DNA MER2_type 6 315 -23 1519 215 48 64 chr5 70712859 70713014 -132372518 - Charlie4a DNA MER1_type -1453 508 352 213 39 0 0 chr5 70713014 70713040 -132372492 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2952 21 0 0 chr5 70713040 70713379 -132372153 - L1PA2 LINE L1 -13 6142 5804 1519 215 48 64 chr5 70713379 70713738 -132371794 - Charlie4a DNA MER1_type -1607 354 1 586 122 0 51 chr5 70714922 70715020 -132370512 - FRAM SINE Alu -26 150 58 207 0 0 0 chr5 70715702 70715725 -132369807 + (CA)n Simple_repeat Simple_repeat 2 24 0 600 267 20 7 chr5 70716195 70716341 -132369191 - MIR SINE MIR -56 206 59 237 333 0 0 chr5 70717076 70717139 -132368393 + Tigger3(Golem) DNA MER2_type 6 68 -2961 * 1146 119 0 0 chr5 70717138 70717298 -132368234 + Tigger3(Golem) DNA MER2_type 2846 3005 -24 738 363 112 17 chr5 70717719 70718685 -132366847 - L2 LINE L2 -2 3270 2215 2706 98 0 8 chr5 70718716 70719092 -132366440 + MER41B LTR ERV1 175 547 -88 24 0 0 0 chr5 70719451 70719475 -132366057 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 70719745 70719766 -132365766 + AT_rich Low_complexity Low_complexity 1 21 0 507 350 41 55 chr5 70719903 70720391 -132365141 - L1MEd LINE L1 -5192 927 447 21 0 0 0 chr5 70721862 70721883 -132363649 + AT_rich Low_complexity Low_complexity 1 21 0 360 0 0 0 chr5 70721994 70722034 -132363498 + (TG)n Simple_repeat Simple_repeat 2 41 0 27 0 0 0 chr5 70722352 70722379 -132363153 + AT_rich Low_complexity Low_complexity 1 27 0 438 200 69 40 chr5 70722723 70722862 -132362670 + MLT1A2 LTR MaLR 1 151 -214 287 347 62 5 chr5 70723355 70723548 -132361984 - MLT1L LTR MaLR -203 412 209 696 167 0 32 chr5 70724465 70724591 -132360941 - FLAM_C SINE Alu -19 124 3 504 343 115 26 chr5 70724598 70725015 -132360517 - L2 LINE L2 -1008 2306 1853 314 237 224 13 chr5 70725201 70725357 -132360175 + L1ME4a LINE L1 5911 6099 -22 1549 121 0 0 chr5 70725484 70725690 -132359842 + AluSx SINE Alu 1 206 -106 14766 222 50 13 chr5 70725701 70727180 -132358352 - L1P4 LINE L1 -711 6105 4681 2182 111 3 0 chr5 70727180 70727469 -132358063 - AluSg SINE Alu -20 290 1 14766 222 50 13 chr5 70727469 70729144 -132356388 - L1P4 LINE L1 -2135 4681 3068 2142 127 24 35 chr5 70729144 70729521 -132356011 + THE1C LTR MaLR 1 373 -2 14766 222 50 13 chr5 70729521 70731804 -132353728 - L1P4 LINE L1 -3748 3068 97 2100 130 0 0 chr5 70732641 70732933 -132352599 - AluSg SINE Alu -13 297 6 22734 182 51 22 chr5 70733159 70737086 -132348446 - L1P4 LINE L1 -567 5914 1657 2501 70 0 10 chr5 70737086 70737400 -132348132 - AluY SINE Alu 0 311 1 22734 182 51 22 chr5 70737400 70739100 -132346432 - L1P4 LINE L1 -4824 1657 8 26 0 0 0 chr5 70739168 70739194 -132346338 + AT_rich Low_complexity Low_complexity 1 26 0 40 21 0 0 chr5 70739294 70739341 -132346191 + AT_rich Low_complexity Low_complexity 1 47 0 1113 74 0 181 chr5 70739821 70740064 -132345468 + L1MA1 LINE L1 6104 6302 0 1210 252 47 18 chr5 70740465 70740846 -132344686 - L1ME2 LINE L1 -15 6149 5758 311 300 0 12 chr5 70741506 70741586 -132343946 - L2 LINE L2 -22 3250 3172 22 0 0 0 chr5 70743155 70743177 -132342355 + AT_rich Low_complexity Low_complexity 1 22 0 226 204 0 0 chr5 70743177 70743231 -132342301 - L1PB4 LINE L1 0 6156 6103 2719 80 149 0 chr5 70743579 70744003 -132341529 - L1PA12 LINE L1 -2 6166 5680 743 130 46 8 chr5 70744008 70744139 -132341393 - L1PA12 LINE L1 -1084 5062 4927 523 239 156 17 chr5 70744304 70744361 -132341171 - MER57A LTR ERV1 0 403 355 207 69 0 0 chr5 70744361 70744390 -132341142 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 523 239 156 17 chr5 70744390 70744512 -132341020 - MER57A LTR ERV1 -48 355 199 457 138 75 0 chr5 70744569 70744649 -132340883 - LTR54B LTR ERV1 -412 86 1 * 1496 210 14 43 chr5 70744649 70744974 -132340558 + MLT1A1 LTR MaLR 47 361 -4 3135 199 28 3 chr5 70745435 70746003 -132339529 + Tigger7 DNA MER2_type 1 582 -1905 280 178 0 0 chr5 70746052 70746097 -132339435 + Tigger5 DNA MER2_type 2279 2323 0 265 262 0 0 chr5 70746154 70746215 -132339317 + Tigger5 DNA MER2_type 2263 2323 0 488 158 12 12 chr5 70746215 70746297 -132339235 + Tigger7 DNA MER2_type 2405 2486 -1 207 0 0 0 chr5 70747378 70747401 -132338131 + (TG)n Simple_repeat Simple_repeat 2 24 0 446 292 70 16 chr5 70747426 70747611 -132337921 - MLT1I LTR MaLR -190 219 25 230 239 21 120 chr5 70747815 70747957 -132337575 - MLT1I-int LTR MaLR -209 1162 1035 23 0 0 0 chr5 70747998 70748021 -132337511 + AT_rich Low_complexity Low_complexity 1 23 0 14516 138 30 3 chr5 70748558 70750905 -132334627 + Tigger1 DNA MER2_type 1 2411 -7 247 250 57 11 chr5 70751260 70751348 -132334184 - MLT1I-int LTR MaLR -1642 93 2 495 318 52 66 chr5 70751383 70751688 -132333844 - MLT1I LTR MaLR -29 380 80 3496 53 0 0 chr5 70752224 70752661 -132332871 + L1PA4 LINE L1 5716 6152 -3 31 0 0 0 chr5 70752661 70752692 -132332840 + AT_rich Low_complexity Low_complexity 1 31 0 292 254 36 146 chr5 70752766 70752986 -132332546 - MER117 DNA MER1_type -1 196 1 2031 151 46 6 chr5 70753234 70753585 -132331947 - MER47A DNA MER2_type -1 365 1 1261 232 34 0 chr5 70753862 70754125 -132331407 - MER82 DNA MER2_type 0 653 382 655 202 23 0 chr5 70754123 70754252 -132331280 - MER82 DNA MER2_type -457 196 65 * 22 0 0 0 chr5 70755277 70755299 -132330233 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 70755536 70755558 -132329974 + AT_rich Low_complexity Low_complexity 1 22 0 834 233 85 17 chr5 70755716 70755952 -132329580 + L1M4 LINE L1 3615 3866 -2280 907 290 82 63 chr5 70756245 70756659 -132328873 - MLT1J2 LTR MaLR -12 438 17 574 223 23 0 chr5 70756751 70756881 -132328651 + FLAM_C SINE Alu 5 137 -6 246 406 44 12 chr5 70757201 70757361 -132328171 + L2 LINE L2 2851 3015 -257 370 286 63 32 chr5 70757743 70757932 -132327600 + MLT1K LTR MaLR 387 581 -7 206 267 0 0 chr5 70757933 70757978 -132327554 + L2 LINE L2 3011 3055 -258 319 235 44 0 chr5 70758049 70758117 -132327415 + L2 LINE L2 3233 3303 -10 1124 139 22 0 chr5 70758646 70758826 -132326706 - Tigger4(Zombi) DNA MER2_type 0 2731 2548 5927 119 22 1 chr5 70758834 70759789 -132325743 - L1PA15 LINE L1 -6 6159 5188 330 68 0 0 chr5 70759790 70759834 -132325698 - Tigger4(Zombi) DNA MER2_type -212 2519 2476 * 537 81 233 0 chr5 70759830 70759916 -132325616 - Tigger4(Zombi) DNA MER2_type -2625 106 1 5000 178 98 31 chr5 70760200 70761144 -132324388 - Charlie1 DNA MER1_type -13 2748 1869 2063 112 39 0 chr5 70761144 70761430 -132324102 + AluSq SINE Alu 7 303 -10 5000 178 98 31 chr5 70761430 70761764 -132323768 - Charlie1 DNA MER1_type -892 1869 1559 563 242 83 0 chr5 70761764 70761884 -132323648 - FLAM_A SINE Alu -3 130 1 5000 178 98 31 chr5 70761884 70761979 -132323553 - Charlie1 DNA MER1_type -1202 1559 2 696 225 6 71 chr5 70762531 70762713 -132322819 + MER8 DNA MER2_type 6 175 -64 417 82 0 16 chr5 70762743 70762804 -132322728 - Tigger2 DNA MER2_type -2641 77 18 186 43 0 0 chr5 70762816 70762839 -132322693 + (TG)n Simple_repeat Simple_repeat 2 24 0 1254 123 39 5 chr5 70762852 70763055 -132322477 - Tigger1 DNA MER2_type 0 2418 2209 621 218 14 42 chr5 70763063 70763205 -132322327 - Tigger1 DNA MER2_type -2275 143 6 231 185 19 0 chr5 70763187 70763241 -132322291 + LTR66 LTR ERVL 385 439 -171 * 399 193 0 0 chr5 70763241 70763324 -132322208 + (CA)n Simple_repeat Simple_repeat 2 84 0 1790 195 104 84 chr5 70763324 70763425 -132322107 - MER44D DNA MER2_type -1882 605 508 1874 151 50 25 chr5 70763425 70763782 -132321750 - MER47A DNA MER2_type 0 366 1 1790 195 104 84 chr5 70763782 70764218 -132321314 - MER44D DNA MER2_type -1979 508 2 21 0 0 0 chr5 70764371 70764392 -132321140 + AT_rich Low_complexity Low_complexity 1 21 0 1409 139 4 49 chr5 70764593 70764859 -132320673 + L1MC2 LINE L1 6071 6324 -20 349 208 57 61 chr5 70764998 70765243 -132320289 + L1MC4 LINE L1 7687 8037 -5 951 171 71 0 chr5 70765667 70765837 -132319695 + MER5A DNA MER1_type 6 187 -2 2400 76 0 0 chr5 70766431 70766735 -132318797 + AluY SINE Alu 1 304 -7 8656 101 29 4 chr5 70766738 70768220 -132317312 + L1PA8A LINE L1 4037 5543 -588 213 175 0 0 chr5 70768220 70768260 -132317272 + (TA)n Simple_repeat Simple_repeat 1 40 0 2421 72 36 14 chr5 70768266 70768277 -132317255 + L1PB1 LINE L1 5782 5791 -360 324 0 0 0 chr5 70768277 70768313 -132317219 + (TG)n Simple_repeat Simple_repeat 2 37 0 2421 72 36 14 chr5 70768313 70768662 -132316870 + L1PB1 LINE L1 5791 6150 -1 1742 152 14 3 chr5 70768933 70769216 -132316316 + AluSx SINE Alu 1 286 -26 21 36 0 0 chr5 70769216 70769244 -132316288 + AT_rich Low_complexity Low_complexity 1 28 0 340 244 0 35 chr5 70769392 70769478 -132316054 - MIR SINE MIR -8 254 172 289 174 0 0 chr5 70769584 70769630 -132315902 + MER6 DNA MER2_type 804 849 -16 368 92 215 0 chr5 70769630 70769695 -132315837 - MADE1 DNA Mariner 0 80 2 2820 132 102 42 chr5 70769701 70770231 -132315301 - MER6A DNA MER2_type -43 562 1 289 297 261 14 chr5 70771242 70771464 -132314068 - L3 LINE CR1 -11 1566 1290 5259 199 56 19 chr5 70772308 70773686 -132311846 - L1 LINE L1 -2311 3835 2407 226 222 22 0 chr5 70773697 70773742 -132311790 + GA-rich Low_complexity Low_complexity 3 48 0 1922 172 11 56 chr5 70774989 70775118 -132310414 - MER1B DNA MER1_type -2373 339 206 2117 115 0 10 chr5 70775118 70775414 -132310118 - AluSx SINE Alu 0 312 20 1922 172 11 56 chr5 70775414 70775639 -132309893 - MER1B DNA MER1_type -2506 206 1 183 299 195 0 chr5 70775660 70775737 -132309795 + L2 LINE L2 3169 3260 -12 3738 190 125 29 chr5 70776389 70777937 -132307595 + MER52A LTR ERV1 3 1755 0 230 225 25 38 chr5 70778169 70778249 -132307283 + MIR SINE MIR 119 197 -65 1877 133 36 29 chr5 70778840 70779148 -132306384 - AluSx SINE Alu -2 310 1 2495 239 54 15 chr5 70779532 70780194 -132305338 - MER76 LTR ERV 0 688 1 1047 269 147 18 chr5 70780311 70781682 -132303850 - L1ME3A LINE L1 -219 5951 4408 316 322 125 13 chr5 70781956 70782269 -132303263 - L1MD2 LINE L1 -476 5883 5527 408 306 118 35 chr5 70782360 70782672 -132302860 - L1MD2 LINE L1 -773 5373 5040 1661 168 50 0 chr5 70782689 70782986 -132302546 - AluJb SINE Alu 0 312 1 4999 33 2 3 chr5 70783183 70783784 -132301748 - L1PA3 LINE L1 -1 6154 5555 511 304 72 49 chr5 70783785 70784031 -132301501 - L1ME3A LINE L1 -1821 4325 4086 2441 60 0 3 chr5 70784031 70784329 -132301203 + AluY SINE Alu 1 297 -14 511 304 72 49 chr5 70784329 70784555 -132300977 - L1ME3A LINE L1 -2060 4086 3842 242 244 201 9 chr5 70784723 70785047 -132300485 - L1ME3A LINE L1 -2764 3382 2997 298 221 13 26 chr5 70786575 70786652 -132298880 + CT-rich Low_complexity Low_complexity 4 79 0 331 246 126 59 chr5 70788679 70789037 -132296495 + L1ME LINE L1 1373 1797 -5150 436 237 66 70 chr5 70789064 70789292 -132296240 + L1ME LINE L1 1942 2168 -4789 1253 218 65 19 chr5 70789297 70789709 -132295823 + L1ME LINE L1 2959 3389 -3568 249 223 117 43 chr5 70790396 70790490 -132295042 + MER91C DNA MER1_type 34 134 -6 2310 103 7 0 chr5 70791534 70791844 -132293688 - AluSq SINE Alu -1 312 1 674 170 0 0 chr5 70791878 70791990 -132293542 + MER5B DNA MER1_type 52 163 -15 184 298 35 18 chr5 70792047 70792104 -132293428 - L3 LINE CR1 -1 1576 1519 24 67 0 0 chr5 70793283 70793328 -132292204 + AT_rich Low_complexity Low_complexity 1 45 0 19764 37 8 0 chr5 70794609 70797819 -132287713 - L1PA5 LINE L1 -5 6149 2906 7226 240 69 14 chr5 70798893 70801196 -132284336 + L1ME LINE L1 3547 5976 -981 1338 156 16 33 chr5 70801202 70801446 -132284086 + AluJo SINE Alu 58 297 -15 331 164 29 87 chr5 70801454 70801558 -132283974 + L1ME LINE L1 5986 6083 -874 2880 152 84 12 chr5 70801581 70802178 -132283354 + L1MB4 LINE L1 5512 6179 -1 701 235 70 77 chr5 70803305 70803590 -132281942 - MLT1I LTR MaLR -115 294 12 414 271 64 55 chr5 70803590 70803808 -132281724 + L1M4 LINE L1 3344 3563 -2583 7671 17 1 0 chr5 70803816 70805428 -132280104 - L1PA2 LINE L1 -4 6151 4532 2887 31 20 0 chr5 70805428 70805782 -132279750 + L1P LINE L1 3832 4192 -1954 1486 221 75 55 chr5 70805838 70806291 -132279241 - LTR40b LTR ERVL 0 462 1 312 283 27 127 chr5 70806292 70806624 -132278908 + L1M4 LINE L1 3626 3924 -2222 531 170 0 11 chr5 70807070 70807164 -132278368 + MER106B DNA MER1_type 35 127 -932 53 30 0 0 chr5 70807195 70807262 -132278270 + AT_rich Low_complexity Low_complexity 1 67 0 11227 178 30 11 chr5 70807262 70810377 -132275155 - L1PA13 LINE L1 -5 6158 2995 5713 221 51 2 chr5 70810383 70811743 -132273789 - L1PA13 LINE L1 -3201 2945 1520 4173 158 49 4 chr5 70811738 70812531 -132273001 + L1M2 LINE L1 1931 2759 -4090 * 293 155 0 0 chr5 70812524 70812582 -132272950 + L1MA4A LINE L1 6242 6299 -4 * 268 244 0 26 chr5 70812590 70812668 -132272864 + Charlie7 DNA MER1_type 544 619 -1993 315 222 269 9 chr5 70813591 70813699 -132271833 - MIR3 SINE MIR -70 138 3 7540 34 1 0 chr5 70813723 70814643 -132270889 + L1PA3 LINE L1 5235 6155 0 27 29 0 0 chr5 70815876 70815910 -132269622 + AT_rich Low_complexity Low_complexity 1 34 0 25 95 0 0 chr5 70816878 70816952 -132268580 + AT_rich Low_complexity Low_complexity 1 74 0 21 0 0 0 chr5 70817403 70817424 -132268108 + AT_rich Low_complexity Low_complexity 1 21 0 446 226 39 10 chr5 70818140 70818242 -132267290 + MER117 DNA MER1_type 13 117 -80 382 231 33 0 chr5 70818804 70818895 -132266637 - MER5A DNA MER1_type -83 106 13 692 296 61 22 chr5 70819589 70819819 -132265713 - MIR SINE MIR -11 251 13 1701 240 8 14 chr5 70819884 70820246 -132265286 + ERVL LTR ERVL 2885 3244 -2520 1899 137 153 24 chr5 70820413 70820792 -132264740 - MSTA LTR MaLR 0 428 1 1650 145 67 12 chr5 70820792 70821123 -132264409 - MSTA-int LTR MaLR -8 1572 1224 1073 206 103 4 chr5 70821456 70821699 -132263833 - LTR53 LTR ERVL 0 519 253 1199 211 0 8 chr5 70821702 70821948 -132263584 - MLT1A1 LTR MaLR 0 365 122 241 165 76 81 chr5 70822675 70822821 -132262711 + L1M2 LINE L1 5620 5771 -526 206 238 47 35 chr5 70824752 70824924 -132260608 + (CACAA)n Simple_repeat Simple_repeat 5 178 0 2416 206 26 15 chr5 70826520 70827127 -132258405 + L1 LINE L1 4567 5180 -966 250 228 22 43 chr5 70827404 70827588 -132257944 + (CAA)n Simple_repeat Simple_repeat 1 180 0 25 0 0 0 chr5 70828464 70828489 -132257043 + AT_rich Low_complexity Low_complexity 1 25 0 300 229 102 34 chr5 70829858 70829976 -132255556 - L1ME1 LINE L1 -34 6132 6007 771 224 55 109 chr5 70830797 70831127 -132254405 + MLT1A1 LTR MaLR 1 312 -53 1330 106 42 17 chr5 70831127 70831363 -132254169 + L1PB1 LINE L1 5906 6147 -4 222 250 9 35 chr5 70832368 70832484 -132253048 + (CAAA)n Simple_repeat Simple_repeat 2 114 0 21 89 0 0 chr5 70833688 70833744 -132251788 + AT_rich Low_complexity Low_complexity 1 56 0 2014 99 3 7 chr5 70836736 70837019 -132248513 - AluY SINE Alu 0 311 30 227 274 44 49 chr5 70837135 70837185 -132248347 + L1MCa LINE L1 1486 1535 -4891 1255 163 79 14 chr5 70837185 70837462 -132248070 - AluJo SINE Alu -17 295 1 227 274 44 49 chr5 70837462 70837615 -132247917 + L1MCa LINE L1 1535 1688 -4738 998 200 97 77 chr5 70837714 70838059 -132247473 - Charlie6 DNA MER1_type -39 3461 3101 1404 207 104 3 chr5 70838059 70838387 -132247145 + MLT1A1 LTR MaLR 1 361 -4 998 200 97 77 chr5 70838387 70838545 -132246987 - Charlie6 DNA MER1_type -399 3101 2948 200 281 11 22 chr5 70838552 70838641 -132246891 + (CATATA)n Simple_repeat Simple_repeat 5 92 0 305 320 89 15 chr5 70838688 70838891 -132246641 - L1M4c LINE L1 -4543 1841 1624 1359 244 40 38 chr5 70841969 70842367 -132243165 + L1M4b LINE L1 1015 1413 -5446 237 179 0 18 chr5 70842390 70842446 -132243086 + L1M4b LINE L1 1746 1800 -5055 777 193 256 19 chr5 70842552 70842821 -132242711 + L1M4b LINE L1 1869 2201 -4758 1545 124 16 16 chr5 70842822 70843071 -132242461 + AluSx SINE Alu 1 249 -63 6295 151 9 20 chr5 70843217 70844386 -132241146 - L1P LINE L1 -1669 4477 3323 767 250 32 5 chr5 70844653 70844873 -132240659 + Charlie6 DNA MER1_type 3236 3461 -39 361 283 24 44 chr5 70844951 70845128 -132240404 - L1MDb LINE L1 -4601 1859 1680 1438 176 53 14 chr5 70845128 70845412 -132240120 + AluJo SINE Alu 1 295 -17 361 283 24 44 chr5 70845412 70845523 -132240009 - L1MDb LINE L1 -4780 1680 1406 331 339 51 20 chr5 70845532 70845825 -132239707 - L1MDb LINE L1 -4938 1458 1146 1165 155 84 28 chr5 70847239 70847490 -132238042 - MER44D DNA MER2_type -74 535 1 3254 73 2 15 chr5 70847747 70848201 -132237331 - LTR7 LTR ERV1 -2 448 1 2101 68 55 7 chr5 70848367 70848660 -132236872 - AluY SINE Alu -4 307 1 446 291 60 10 chr5 70849226 70849425 -132236107 + L1MEc LINE L1 41 249 -6147 * 1641 252 48 76 chr5 70849421 70850583 -132234949 + L1MEc LINE L1 1218 2347 -4049 1739 248 43 50 chr5 70850594 70851179 -132234353 + L1M4b LINE L1 3 583 -6276 241 155 35 0 chr5 70852047 70852105 -132233427 + (TA)n Simple_repeat Simple_repeat 2 61 0 229 68 45 0 chr5 70852117 70852161 -132233371 + (TG)n Simple_repeat Simple_repeat 1 46 0 6068 96 8 15 chr5 70852843 70853732 -132231800 + L1PA11 LINE L1 5292 6174 0 225 94 0 0 chr5 70853743 70853775 -132231757 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 70854014 70854037 -132231495 + AT_rich Low_complexity Low_complexity 1 23 0 1754 106 62 3 chr5 70854790 70855111 -132230421 + L1MA2 LINE L1 5965 6304 0 680 228 60 0 chr5 70855388 70855555 -132229977 - MER45A DNA AcHobo -1 177 1 580 174 9 52 chr5 70857171 70857286 -132228246 - MLT1A2 LTR MaLR -264 110 1 1458 183 31 24 chr5 70857346 70857635 -132227897 - AluJb SINE Alu -18 294 4 234 128 0 0 chr5 70858076 70858115 -132227417 + (CATA)n Simple_repeat Simple_repeat 2 40 0 8006 141 24 14 chr5 70859394 70859580 -132225952 - L1P LINE L1 -945 5201 5018 2391 81 0 13 chr5 70859580 70859890 -132225642 - AluY SINE Alu -4 307 2 8006 141 24 14 chr5 70859890 70861178 -132224354 - L1P LINE L1 -1128 5018 3712 7109 99 14 3 chr5 70861322 70862401 -132223131 + L1P LINE L1 3631 4721 -1425 210 91 0 0 chr5 70862409 70862442 -132223090 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 608 210 23 45 chr5 70862456 70862632 -132222900 + L1MD3 LINE L1 7106 7277 -718 386 278 78 0 chr5 70862633 70862748 -132222784 + MLT1F1 LTR MaLR 1 124 -443 1453 203 47 19 chr5 70862749 70863109 -132222423 + L1MD3 LINE L1 7404 7773 -222 1876 148 26 34 chr5 70863383 70863761 -132221771 - MLT1B LTR MaLR -13 377 3 331 307 59 13 chr5 70863761 70863894 -132221638 - MLT1J LTR MaLR -371 140 1 285 276 41 24 chr5 70865362 70865485 -132220047 + HAL1 LINE L1 386 510 -1997 1901 252 106 8 chr5 70865664 70866381 -132219151 + L1ME3 LINE L1 5359 6145 -17 933 330 25 8 chr5 70866460 70866824 -132218708 + MLT1I LTR MaLR 17 386 -23 1233 245 33 49 chr5 70866857 70867346 -132218186 + HAL1 LINE L1 1239 1719 -788 270 318 35 41 chr5 70867425 70867688 -132217844 + MLT1J LTR MaLR 97 400 -111 499 280 16 66 chr5 70867878 70868135 -132217397 + HAL1 LINE L1 2243 2486 -21 491 298 54 50 chr5 70869291 70869549 -132215983 - MIR SINE MIR -1 261 3 238 301 108 0 chr5 70869641 70869734 -132215798 + MIR SINE MIR 66 168 -94 234 206 165 41 chr5 70869806 70869903 -132215629 + L2 LINE L2 3173 3281 -32 180 0 0 0 chr5 70870589 70870609 -132214923 + (CA)n Simple_repeat Simple_repeat 1 20 0 696 171 91 6 chr5 70870999 70871174 -132214358 + AluSg/x SINE Alu 86 275 -37 485 343 76 25 chr5 70871259 70871523 -132214009 + L2 LINE L2 2783 3055 -217 1839 149 46 29 chr5 70872387 70872736 -132212796 + THE1B LTR MaLR 9 363 -1 849 119 25 6 chr5 70872924 70873083 -132212449 + GA-rich Low_complexity Low_complexity 1 162 0 1014 174 106 87 chr5 70873508 70873819 -132211713 + THE1B LTR MaLR 39 364 0 10948 99 18 9 chr5 70873819 70875385 -132210147 + THE1B-int LTR MaLR 1 1580 0 2041 130 60 20 chr5 70875387 70875734 -132209798 + THE1B LTR MaLR 3 363 -1 634 320 52 19 chr5 70876257 70876526 -132209006 - MLT1I LTR MaLR -115 294 17 1827 262 103 7 chr5 70876606 70877324 -132208208 - L1ME3 LINE L1 -17 6145 5359 518 284 105 46 chr5 70877505 70877829 -132207703 - HAL1 LINE L1 -1997 510 168 508 114 0 11 chr5 70879110 70879198 -132206334 + L1PB4 LINE L1 6068 6154 -2 2079 163 67 7 chr5 70880673 70881077 -132204455 - MSTA LTR MaLR 0 428 1 189 74 0 0 chr5 70881286 70881313 -132204219 + (CA)n Simple_repeat Simple_repeat 2 28 0 5593 188 22 6 chr5 70881754 70882996 -132202536 - L1 LINE L1 -1101 5045 3784 8845 88 29 8 chr5 70883182 70885183 -132200349 + L1PA5 LINE L1 4123 6149 -5 3029 158 44 16 chr5 70885919 70886535 -132198997 + L1MB1 LINE L1 5553 6185 -4 2062 125 0 0 chr5 70886969 70887321 -132198211 - AluSx SINE Alu 0 354 3 262 343 84 7 chr5 70887479 70887622 -132197910 + MIR SINE MIR 53 206 -56 1083 116 83 0 chr5 70889005 70889221 -132196311 - L1MA2 LINE L1 -106 6198 5965 523 131 40 11 chr5 70890366 70890541 -132194991 + (TA)n Simple_repeat Simple_repeat 1 180 0 636 197 78 16 chr5 70892031 70892224 -132193308 + MLT1B LTR MaLR 173 377 -13 601 294 87 37 chr5 70892235 70892558 -132192974 + MLT1J LTR MaLR 130 468 -43 292 291 43 60 chr5 70894641 70894683 -132190849 - L2 LINE L2 0 3313 3272 1775 201 74 70 chr5 70894683 70895195 -132190337 + MER67D LTR ERV1 1 514 0 292 291 43 60 chr5 70895195 70895269 -132190263 - L2 LINE L2 -41 3272 3199 1954 129 134 0 chr5 70895342 70895684 -132189848 - MSTA LTR MaLR 0 428 41 208 350 49 45 chr5 70896503 70896769 -132188763 + L2 LINE L2 2930 3196 -117 1624 189 55 6 chr5 70897027 70897355 -132188177 + MLT1A1 LTR MaLR 21 364 -1 595 313 73 16 chr5 70897634 70897880 -132187652 + MIR SINE MIR 3 262 0 231 305 41 24 chr5 70897937 70898077 -132187455 - MIR3 SINE MIR -64 144 8 2194 113 3 31 chr5 70898220 70898538 -132186994 - AluSx SINE Alu -3 309 1 502 165 12 0 chr5 70898540 70898625 -132186907 - MIR SINE MIR -111 151 66 2273 93 6 6 chr5 70899453 70899765 -132185767 - AluSp SINE Alu 0 313 2 195 42 0 0 chr5 70900103 70900127 -132185405 + (TA)n Simple_repeat Simple_repeat 1 24 0 337 296 37 52 chr5 70900333 70900468 -132185064 + MLT1K LTR MaLR 102 234 -354 781 233 81 19 chr5 70900730 70901080 -132184452 - LTR25 LTR ERV1 -41 753 417 242 219 141 0 chr5 70901053 70901117 -132184415 - MER51A LTR ERV1 -354 280 208 * 403 140 18 114 chr5 70901256 70901370 -132184162 - MER61E LTR ERV1 -466 103 1 21 36 0 0 chr5 70901766 70901794 -132183738 + AT_rich Low_complexity Low_complexity 1 28 0 17141 135 23 92 chr5 70902827 70906674 -132178858 - L1P LINE L1 -2557 3589 9 881 276 57 6 chr5 70906751 70907117 -132178415 + L1MD2 LINE L1 4709 5093 -1053 6853 132 10 11 chr5 70907136 70908489 -132177043 - L1MA1 LINE L1 0 6302 4953 2449 255 51 31 chr5 70908488 70909524 -132176008 + L1MD2 LINE L1 5078 6132 -227 * 24 53 0 0 chr5 70909544 70909582 -132175950 + AT_rich Low_complexity Low_complexity 1 38 0 501 174 104 0 chr5 70909582 70909697 -132175835 - L1MD3 LINE L1 -959 7036 6910 22 0 0 0 chr5 70909802 70909824 -132175708 + AT_rich Low_complexity Low_complexity 1 22 0 5822 179 24 14 chr5 70960380 70961618 -132123914 + L1 LINE L1 3204 4453 -1693 677 111 0 0 chr5 70961738 70961828 -132123704 - 5S rRNA rRNA -31 90 1 407 165 0 71 chr5 70961907 70961992 -132123540 - Tigger5 DNA MER2_type -3 2320 2242 * 469 207 0 0 chr5 70961982 70962064 -132123468 + Tigger5 DNA MER2_type 2242 2323 0 3210 228 67 21 chr5 70962083 70963082 -132122450 + L1MD2 LINE L1 4359 5403 -743 288 102 18 0 chr5 70963093 70963138 -132122394 + L1MD2 LINE L1 5541 5591 -571 2116 108 23 3 chr5 70963138 70963573 -132121959 - AluSq SINE Alu 0 441 1 868 213 5 35 chr5 70963573 70963770 -132121762 + L1MD2 LINE L1 5582 5772 -470 993 177 6 0 chr5 70963777 70963935 -132121597 + MER44D DNA MER2_type 1 159 -546 811 182 169 86 chr5 70963925 70964227 -132121305 + MER44D DNA MER2_type 223 604 -1 * 1272 189 28 31 chr5 70964228 70964514 -132121018 + L1MD2 LINE L1 5782 6066 -293 * 5540 89 35 19 chr5 70964509 70964798 -132120734 + L1PA11 LINE L1 5336 5619 -555 2386 123 27 0 chr5 70964798 70965163 -132120369 + THE1C LTR MaLR 1 375 0 5540 89 35 19 chr5 70965163 70965693 -132119839 + L1PA11 LINE L1 5619 6168 -6 253 188 62 0 chr5 70965701 70965749 -132119783 - MER6 DNA MER2_type -96 48 -2 200 233 0 0 chr5 70965766 70965809 -132119723 + (TA)n Simple_repeat Simple_repeat 2 44 0 331 328 59 42 chr5 70965813 70965932 -132119600 + L2 LINE L2 3147 3267 -5 25 31 0 0 chr5 70965932 70965964 -132119568 + AT_rich Low_complexity Low_complexity 1 32 0 2289 192 40 8 chr5 70966501 70967026 -132118506 + L1MB8 LINE L1 5633 6174 -4 4460 178 44 18 chr5 70968543 70970373 -132115159 + L1MB8 LINE L1 4307 6178 0 21 71 0 0 chr5 70970837 70970879 -132114653 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr5 70970906 70970930 -132114602 + AT_rich Low_complexity Low_complexity 1 24 0 487 274 76 0 chr5 70971491 70971648 -132113884 - L3b LINE CR1 -115 1468 1300 4010 161 12 6 chr5 70971993 70972666 -132112866 + LTR58 LTR ERV1 3 679 0 17773 131 16 80 chr5 70973188 70976797 -132108735 + L1PA7 LINE L1 1 3377 -2769 6879 90 0 8 chr5 70976805 70978661 -132106871 + L1PA7 LINE L1 4370 6186 0 327 130 0 0 chr5 70979103 70979157 -132106375 + (CA)n Simple_repeat Simple_repeat 1 54 0 695 219 109 34 chr5 70981355 70981413 -132104119 + L1M4 LINE L1 4275 4327 -1819 3575 168 72 15 chr5 70981413 70982078 -132103454 - MER44D DNA MER2_type 0 705 3 695 219 109 34 chr5 70982078 70982284 -132103248 + L1M4 LINE L1 4327 4559 -1587 6041 170 25 30 chr5 70982299 70983334 -132102198 + L1M3f LINE L1 4 1035 -4293 2188 98 3 0 chr5 70983334 70983621 -132101911 + AluSx SINE Alu 1 288 -24 6041 170 25 30 chr5 70983621 70983766 -132101766 + L1M3f LINE L1 1035 1179 -4149 5692 176 42 13 chr5 70983766 70984797 -132100735 + L1M1 LINE L1 13 1073 -6492 1952 141 20 54 chr5 70984972 70985528 -132100004 + MER4A LTR ERV1 34 638 -26 12687 133 30 1 chr5 70985532 70987530 -132098002 + L1M1 LINE L1 1061 3117 -4448 531 216 0 16 chr5 70987568 70987693 -132097839 - L1M4 LINE L1 -3096 3050 2928 * 853 168 71 5 chr5 70987689 70987886 -132097646 + L1M1 LINE L1 4585 4794 -2771 848 179 30 0 chr5 70987884 70988052 -132097480 - L1M4 LINE L1 -3218 2928 2756 * 6775 129 21 10 chr5 70988047 70988810 -132096722 + L1MA3 LINE L1 4792 5545 -2179 10364 160 7 1 chr5 70988810 70991571 -132093961 + L1PA13 LINE L1 3425 6158 -5 6775 129 21 10 chr5 70991571 70992939 -132092593 + L1MA3 LINE L1 5545 7020 -704 243 0 0 0 chr5 70992939 70992966 -132092566 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6775 129 21 10 chr5 70992966 70993364 -132092168 + L1MA3 LINE L1 7020 7412 -312 2094 127 25 3 chr5 70993364 70993725 -132091807 + L1MA2 LINE L1 5936 6304 0 1907 195 11 26 chr5 70993731 70993799 -132091733 + L1MA4 LINE L1 2404 2472 -5093 2095 135 3 0 chr5 70993799 70994110 -132091422 + AluJb SINE Alu 1 312 0 1907 195 11 26 chr5 70994110 70994507 -132091025 + L1MA4 LINE L1 2472 2862 -4703 13115 190 49 21 chr5 70994635 70998606 -132086926 + L1MA4 LINE L1 3083 6943 -776 1833 175 31 0 chr5 70998606 70998898 -132086634 + AluSx SINE Alu 1 301 -11 13115 190 49 21 chr5 70998898 70998916 -132086616 + L1MA4 LINE L1 6943 6959 -760 333 118 0 0 chr5 70998916 70998967 -132086565 + (TA)n Simple_repeat Simple_repeat 2 52 0 13115 190 49 21 chr5 70998967 70999229 -132086303 + L1MA4 LINE L1 6959 7459 -260 904 191 6 0 chr5 70999229 70999385 -132086147 + L1MC1 LINE L1 6159 6316 -17 2734 300 83 44 chr5 70999640 71000973 -132084559 - L2 LINE L2 -24 3289 1880 346 253 27 40 chr5 71001197 71001347 -132084185 + MER103 DNA DNA 17 164 -2 243 79 0 0 chr5 71001597 71001635 -132083897 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 513 130 140 0 chr5 71001643 71001743 -132083789 - L1MA8 LINE L1 0 6291 6178 * 2368 209 61 6 chr5 71001741 71002411 -132083121 + L1MA7 LINE L1 2739 3445 -2701 2309 164 5 0 chr5 71002519 71002935 -132082597 + L1MA7 LINE L1 4464 4881 -1265 2201 157 8 27 chr5 71002981 71003335 -132082197 + LTR31 LTR ERV1 1 349 -270 2555 101 22 3 chr5 71003335 71003494 -132082038 + THE1C LTR MaLR 1 155 -220 1521 103 0 9 chr5 71003494 71003707 -132081825 - AluSg/x SINE Alu -12 298 88 2555 101 22 3 chr5 71003707 71003915 -132081617 + THE1C LTR MaLR 155 375 0 2201 157 8 27 chr5 71003915 71003935 -132081597 + LTR31 LTR ERV1 349 368 -251 5434 139 26 36 chr5 71004578 71004688 -132080844 + L1MA7 LINE L1 5219 5329 -962 2135 129 0 25 chr5 71004688 71005006 -132080526 + AluSq SINE Alu 1 310 -3 5434 139 26 36 chr5 71005006 71005971 -132079561 + L1MA7 LINE L1 5329 6285 -6 30 27 0 0 chr5 71005971 71006008 -132079524 + AT_rich Low_complexity Low_complexity 1 37 0 849 83 0 0 chr5 71006082 71006191 -132079341 + LTR8 LTR ERV1 547 655 -36 11006 137 24 49 chr5 71006192 71008387 -132077145 + HUERS-P1 LTR ERV1 59 2350 -3913 7749 129 35 24 chr5 71008385 71010676 -132074856 + HUERS-P1 LTR ERV1 3592 6263 0 * 3762 110 11 60 chr5 71010677 71011294 -132074238 + LTR8 LTR ERV1 1 587 -104 198 0 0 0 chr5 71012140 71012162 -132073370 + (A)n Simple_repeat Simple_repeat 1 22 0 704 277 98 44 chr5 71013364 71013682 -132071850 + LTR33 LTR ERVL 1 335 -186 1129 170 53 15 chr5 71013701 71013966 -132071566 - MER33 DNA MER1_type -9 315 41 301 248 33 33 chr5 71013972 71014093 -132071439 + LTR33 LTR ERVL 401 521 0 295 147 53 27 chr5 71014093 71014168 -132071364 + L1ME4a LINE L1 5846 5922 -199 26 0 0 0 chr5 71015113 71015139 -132070393 + AT_rich Low_complexity Low_complexity 1 26 0 547 134 0 0 chr5 71015144 71015241 -132070291 + L1MB4 LINE L1 6084 6180 0 725 313 49 8 chr5 71015601 71015847 -132069685 - MIR SINE MIR 0 262 7 23 33 0 0 chr5 71015894 71015924 -132069608 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 71016265 71016286 -132069246 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr5 71016318 71016370 -132069162 + AT_rich Low_complexity Low_complexity 1 52 0 1499 194 14 38 chr5 71016403 71016696 -132068836 - AluJo SINE Alu -22 290 5 1767 172 3 0 chr5 71017656 71017946 -132067586 + AluJb SINE Alu 1 291 -21 1642 258 34 28 chr5 71019375 71020089 -132065443 + L1ME3 LINE L1 3264 3981 -2165 2355 223 96 50 chr5 71020149 71021589 -132063943 + L1ME3 LINE L1 4643 6156 -6 24 53 0 0 chr5 71021751 71021789 -132063743 + AT_rich Low_complexity Low_complexity 1 38 0 1397 185 67 12 chr5 71021886 71022216 -132063316 - Charlie1 DNA MER1_type -217 2544 2197 483 252 33 60 chr5 71022194 71022345 -132063187 - Charlie1 DNA MER1_type -2612 149 3 * 180 356 43 77 chr5 71022423 71022656 -132062876 + L2 LINE L2 2992 3216 -56 1289 268 13 13 chr5 71022662 71023165 -132062367 + L2 LINE L2 2657 3153 -160 3143 170 42 4 chr5 71023165 71023688 -132061844 - MER44D DNA MER2_type 0 605 8 475 223 25 89 chr5 71023692 71023849 -132061683 + L2 LINE L2 3159 3305 -8 210 208 0 21 chr5 71023868 71023916 -132061616 + L2 LINE L2 3267 3313 0 7431 191 38 147 chr5 71023948 71026187 -132059345 + L1M1 LINE L1 300 2781 -4581 1754 99 0 4 chr5 71026187 71026420 -132059112 + AluSg/x SINE Alu 72 303 -9 7431 191 38 147 chr5 71026420 71027835 -132057697 + L1M1 LINE L1 2781 4348 -3014 629 240 0 0 chr5 71027835 71027960 -132057572 + FRAM SINE Alu 25 149 -27 7431 191 38 147 chr5 71027960 71030360 -132055172 + L1M1 LINE L1 4348 6634 -728 16244 60 4 6 chr5 71030360 71033055 -132052477 - L1PA7 LINE L1 -164 5990 3297 25 95 0 0 chr5 71034042 71034116 -132051416 + AT_rich Low_complexity Low_complexity 1 74 0 21 0 0 0 chr5 71034567 71034588 -132050944 + AT_rich Low_complexity Low_complexity 1 21 0 446 226 39 10 chr5 71035303 71035405 -132050127 + MER117 DNA MER1_type 13 117 -80 382 231 33 0 chr5 71035967 71036058 -132049474 - MER5A DNA MER1_type -83 106 13 666 293 65 22 chr5 71036752 71036981 -132048551 - MIR SINE MIR -11 251 13 10409 213 83 52 chr5 71037046 71039699 -132045833 + ERVL-F LTR ERVL 2885 5663 -101 306 125 0 0 chr5 71039703 71039751 -132045781 + Ricksha DNA DNA 296 343 -911 397 156 0 0 chr5 71039753 71039817 -132045715 + MLT2F LTR ERVL 1 64 -599 1176 226 95 39 chr5 71039817 71040154 -132045378 - ERVL-F LTR ERVL -3812 1952 1597 1098 164 0 0 chr5 71040154 71040325 -132045207 - AluSg/x SINE Alu -5 307 137 2863 249 72 15 chr5 71040326 71041054 -132044478 - ERVL-F LTR ERVL -4159 1605 829 5442 67 32 8 chr5 71041054 71041802 -132043730 + MER4E LTR ERV1 1 766 0 2863 249 72 15 chr5 71041802 71041856 -132043676 - ERVL-F LTR ERVL -4935 829 779 206 139 25 25 chr5 71041885 71041964 -132043568 + (TA)n Simple_repeat Simple_repeat 1 79 0 1052 174 74 62 chr5 71041964 71042370 -132043162 - MLT2D LTR ERVL -60 404 17 510 270 104 18 chr5 71042390 71042553 -132042979 - ERVL-F LTR ERVL -5065 699 523 522 319 93 9 chr5 71042655 71042987 -132042545 - ERVL-F LTR ERVL -5374 390 31 254 136 0 0 chr5 71043046 71043090 -132042442 - MLT2F LTR ERVL -7 656 613 633 294 82 57 chr5 71043131 71043413 -132042119 - MLT2C1 LTR ERVL -65 332 44 * 789 219 62 22 chr5 71043254 71043432 -132042100 - MLT1E3 LTR MaLR -394 230 46 420 293 20 27 chr5 71043431 71043578 -132041954 - MLT2F LTR ERVL -517 146 1 * 1345 230 35 47 chr5 71043725 71044043 -132041489 - MLT1H1 LTR MaLR 0 555 242 722 139 0 17 chr5 71044076 71044191 -132041341 - FRAM SINE Alu -23 153 41 186 205 0 0 chr5 71044467 71044506 -132041026 + L2 LINE L2 3275 3313 0 465 206 0 0 chr5 71046313 71046420 -132039112 + GA-rich Low_complexity Low_complexity 4 110 0 2403 244 72 76 chr5 71047318 71049216 -132036316 + L1MD2 LINE L1 782 2650 -3756 846 266 39 5 chr5 71049224 71049431 -132036101 - MER58A DNA MER1_type 0 224 11 4798 244 72 33 chr5 71049461 71050480 -132035052 + L1MD2 LINE L1 2661 3639 -2767 2592 44 0 22 chr5 71050480 71050798 -132034734 + AluY SINE Alu 1 311 0 4798 244 72 33 chr5 71050798 71050882 -132034650 + L1MD2 LINE L1 3639 3718 -2688 2017 130 3 3 chr5 71050882 71051196 -132034336 - AluSx SINE Alu 0 314 1 4798 244 72 33 chr5 71051196 71051959 -132033573 + L1MD2 LINE L1 3718 4602 -1804 1521 197 103 6 chr5 71052051 71052401 -132033131 - L1MD2 LINE L1 -177 6182 5799 504 248 28 38 chr5 71052403 71052605 -132032927 + L1MD2 LINE L1 5837 6042 -124 * 2126 211 47 21 chr5 71052599 71053406 -132032126 - L1MD2 LINE L1 -565 5794 4965 4704 253 55 10 chr5 71053411 71054964 -132030568 - L1MD2 LINE L1 -1283 5123 3502 2695 239 71 31 chr5 71054962 71056182 -132029350 + L1MD2 LINE L1 5105 6373 -246 * 526 294 116 20 chr5 71056478 71056781 -132028751 + L1ME LINE L1 5470 5801 -363 * 1906 224 85 19 chr5 71056780 71057405 -132028127 + L1M4 LINE L1 3499 4164 -1982 11430 67 1 9 chr5 71057505 71058990 -132026542 - L1P LINE L1 -4668 1478 7 14898 148 15 106 chr5 71058996 71062372 -132023160 - L1P LINE L1 -3063 3083 12 1328 217 17 0 chr5 71062388 71062688 -132022844 + L1M4 LINE L1 4330 4634 -1512 592 75 0 0 chr5 71062684 71062764 -132022768 - L1P LINE L1 -1920 4226 4147 * 226 132 38 38 chr5 71062782 71062835 -132022697 + L1M4 LINE L1 4582 4634 -1512 * 17834 61 11 2 chr5 71062831 71065204 -132020328 - L1P LINE L1 -1920 4226 1832 30818 39 2 2 chr5 71065214 71071380 -132014152 + L1PA3 LINE L1 9 6167 0 11368 129 22 20 chr5 71071409 71073238 -132012294 - L1P LINE L1 -4304 1842 11 241 246 82 0 chr5 71074786 71074847 -132010685 + L2 LINE L2 3157 3222 -50 1788 200 15 24 chr5 71074867 71075277 -132010255 - L1MD3 LINE L1 0 7995 7590 1786 141 29 16 chr5 71075293 71075606 -132009926 - L1MA8 LINE L1 -2 6289 5973 2918 163 11 2 chr5 71075983 71076436 -132009096 - MSTB2 LTR MaLR 0 457 1 3497 249 37 28 chr5 71076844 71077610 -132007922 + L1PA13 LINE L1 1 778 -6009 2502 88 73 6 chr5 71077610 71077951 -132007581 - THE1B LTR MaLR 0 364 1 3497 249 37 28 chr5 71077951 71078081 -132007451 + L1PA13 LINE L1 778 905 -5882 5279 207 34 20 chr5 71078171 71079765 -132005767 + L1PA13 LINE L1 1180 2798 -3999 5869 126 26 11 chr5 71079765 71080718 -132004814 + L1PA15 LINE L1 5200 6165 0 1942 106 53 0 chr5 71080821 71081106 -132004426 - AluY SINE Alu 0 303 5 1527 131 73 4 chr5 71081155 71081415 -132004117 + L1MB4 LINE L1 5902 6179 -1 189 74 0 0 chr5 71081526 71081553 -132003979 + (TGGA)n Simple_repeat Simple_repeat 3 29 0 1809 174 3 0 chr5 71082606 71082899 -132002633 + AluJb SINE Alu 1 294 -18 281 240 80 0 chr5 71082978 71083053 -132002479 - L1ME LINE L1 -394 5727 5647 183 282 0 0 chr5 71083367 71083406 -132002126 + L2 LINE L2 3250 3288 -25 2539 193 2 6 chr5 71083418 71083911 -132001621 - L1MB8 LINE L1 -6 6172 5682 281 308 26 17 chr5 71084188 71084305 -132001227 + L3b LINE CR1 1173 1290 -293 359 285 153 15 chr5 71084757 71084894 -132000638 + L3b LINE CR1 1289 1444 -139 273 312 115 52 chr5 71085422 71085979 -131999553 + L2 LINE L2 1794 2385 -929 1079 271 39 45 chr5 71086246 71086688 -131998844 + L1MC4a LINE L1 5455 5893 -1915 1840 156 7 3 chr5 71086701 71086984 -131998548 + AluJb SINE Alu 14 297 -15 205 339 98 18 chr5 71087909 71088021 -131997511 + L2 LINE L2 2588 2708 -606 189 243 0 0 chr5 71088822 71088859 -131996673 + MIR SINE MIR 218 254 -8 1045 244 45 14 chr5 71088910 71089201 -131996331 - MLT1K LTR MaLR 0 588 289 448 139 13 0 chr5 71089212 71089291 -131996241 - MER116 DNA Mariner 0 80 1 * 536 319 0 19 chr5 71089291 71089431 -131996101 - MLT1K LTR MaLR -317 271 135 991 180 0 0 chr5 71089566 71089733 -131995799 + MER69A DNA AcHobo 10 176 -1 1240 115 0 17 chr5 71091290 71091464 -131994068 + AluSx SINE Alu 1 171 -141 453 248 30 0 chr5 71091477 71091578 -131993954 - MER21B LTR ERV1 -294 569 466 254 111 0 0 chr5 71091627 71091663 -131993869 + Alu SINE Alu 243 278 -23 858 149 0 0 chr5 71091681 71091829 -131993703 + (GGAA)n Simple_repeat Simple_repeat 3 150 0 1624 179 61 0 chr5 71092063 71092342 -131993190 + AluJb SINE Alu 1 296 -16 2331 234 38 27 chr5 71092431 71093101 -131992431 - MER21B LTR ERV1 -111 752 20 23 0 0 0 chr5 71094687 71094710 -131990822 + GC_rich Low_complexity Low_complexity 1 23 0 716 225 0 0 chr5 71097678 71097807 -131987725 - FLAM_A SINE Alu -4 129 1 453 237 118 30 chr5 71098321 71098456 -131987076 - MIR SINE MIR -96 166 20 1531 235 21 13 chr5 71098465 71098844 -131986688 + L1MB7 LINE L1 5803 6184 0 296 262 151 52 chr5 71099851 71100023 -131985509 + MIR SINE MIR 20 208 -54 186 297 23 102 chr5 71100001 71100129 -131985403 - MIR3 SINE MIR -82 126 9 * 202 269 179 0 chr5 71100389 71100456 -131985076 + MIR SINE MIR 1 79 -183 465 266 137 43 chr5 71100506 71100739 -131984793 + MIR SINE MIR 3 257 -5 269 264 14 14 chr5 71101418 71101490 -131984042 + CT-rich Low_complexity Low_complexity 6 77 0 2902 136 28 36 chr5 71102011 71102481 -131983051 - MLT1C LTR MaLR -1 466 1 242 116 23 0 chr5 71103826 71103869 -131981663 + (CA)n Simple_repeat Simple_repeat 1 44 0 34 0 0 0 chr5 71103941 71103975 -131981557 + AT_rich Low_complexity Low_complexity 1 34 0 1072 209 0 23 chr5 71104002 71104222 -131981310 - AluJo SINE Alu -97 215 1 226 311 62 66 chr5 71104421 71104694 -131980838 + L2 LINE L2 2487 2758 -556 933 136 0 20 chr5 71104888 71105035 -131980497 - MER5B DNA MER1_type -1 177 34 926 273 107 58 chr5 71105041 71105528 -131980004 - MLT1J LTR MaLR 0 511 1 695 281 49 70 chr5 71106396 71106741 -131978791 - L2 LINE L2 -46 3267 2930 351 315 41 113 chr5 71107385 71107677 -131977855 - L2 LINE L2 -9 3263 2993 339 314 115 6 chr5 71108176 71108332 -131977200 - MIR SINE MIR -89 173 1 2368 87 3 10 chr5 71109357 71109667 -131975865 - AluSx SINE Alu -4 308 1 484 243 36 92 chr5 71111278 71111529 -131974003 - MER102a DNA MER1_type -9 321 85 200 278 10 52 chr5 71112532 71112629 -131972903 + L3 LINE CR1 1484 1576 -1 24 0 0 0 chr5 71112776 71112800 -131972732 + AT_rich Low_complexity Low_complexity 1 24 0 639 261 28 6 chr5 71113663 71113843 -131971689 - MIR SINE MIR -65 197 14 1074 136 116 41 chr5 71114110 71114352 -131971180 - LOR1a LTR ERV1 0 497 238 642 254 17 23 chr5 71115359 71115536 -131969996 + MER5B DNA MER1_type 3 178 0 249 311 57 33 chr5 71115541 71115663 -131969869 + MIR3 SINE MIR 15 139 -69 315 0 0 0 chr5 71115717 71115752 -131969780 + (A)n Simple_repeat Simple_repeat 1 35 0 227 269 145 27 chr5 71115836 71116022 -131969510 + L1ME4a LINE L1 5866 6073 -48 431 301 24 82 chr5 71116563 71116639 -131968893 + MIR SINE MIR 69 148 -114 2543 71 3 0 chr5 71116639 71116947 -131968585 + AluSx SINE Alu 1 309 -3 431 301 24 82 chr5 71116947 71117076 -131968456 + MIR SINE MIR 148 262 0 1062 184 0 6 chr5 71117623 71117802 -131967730 - MER5B DNA MER1_type 0 178 1 411 338 19 26 chr5 71118570 71118724 -131966808 - MIR SINE MIR -108 154 2 231 114 0 0 chr5 71119698 71119733 -131965799 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 460 295 115 6 chr5 71121543 71121699 -131963833 + MER5B DNA MER1_type 6 178 0 1663 267 145 44 chr5 71121941 71123313 -131962219 - L2 LINE L2 -2 3311 1795 282 57 0 0 chr5 71125166 71125201 -131960331 + U2 snRNA snRNA 2 36 -152 355 68 0 0 chr5 71125280 71125324 -131960208 + MER30 DNA MER1_type 1 44 -186 22 0 0 0 chr5 71126063 71126085 -131959447 + AT_rich Low_complexity Low_complexity 1 22 0 921 208 26 42 chr5 71126154 71126433 -131959099 - L1ME1 LINE L1 -17 6149 5894 284 85 43 0 chr5 71126435 71126482 -131959050 + T-rich Low_complexity Low_complexity 2 50 0 2036 122 3 14 chr5 71126487 71126782 -131958750 - AluSx SINE Alu 0 312 21 1684 217 44 52 chr5 71126785 71127447 -131958085 - L1ME1 LINE L1 -264 5902 5041 1839 167 27 0 chr5 71127447 71127746 -131957786 + 7SLRNA srpRNA srpRNA 2 308 -12 1684 217 44 52 chr5 71127746 71127936 -131957596 - L1ME1 LINE L1 -1125 5041 4851 300 242 83 76 chr5 71127963 71128120 -131957412 - L1ME4a LINE L1 -30 6091 5934 747 339 68 3 chr5 71128592 71128942 -131956590 - LTR16B LTR ERVL -6 458 86 2741 141 9 7 chr5 71128942 71129362 -131956170 - MSTB LTR MaLR 0 426 6 346 300 76 36 chr5 71129432 71129701 -131955831 - L1ME4a LINE L1 -755 5578 5298 22 0 0 0 chr5 71129813 71129835 -131955697 + AT_rich Low_complexity Low_complexity 1 22 0 376 228 0 0 chr5 71131239 71131318 -131954214 - MLT1K LTR MaLR -5 583 505 860 303 129 85 chr5 71132057 71132337 -131953195 - L2 LINE L2 -1 3271 3005 1784 168 3 10 chr5 71132337 71132640 -131952892 + AluJo SINE Alu 1 301 -11 860 303 129 85 chr5 71132640 71132840 -131952692 - L2 LINE L2 -267 3005 2815 2087 121 0 7 chr5 71132840 71133137 -131952395 + AluSc SINE Alu 1 295 -14 1880 39 8 0 chr5 71133137 71133371 -131952161 + L1PA4 LINE L1 5920 6155 0 860 303 129 85 chr5 71133371 71133891 -131951641 - L2 LINE L2 -457 2815 2319 1582 120 0 0 chr5 71133891 71134129 -131951403 + AluSg/x SINE Alu 73 310 0 404 133 0 0 chr5 71134129 71134189 -131951343 + AluSq/x SINE Alu 88 147 -165 860 303 129 85 chr5 71134189 71134647 -131950885 - L2 LINE L2 -952 2320 1684 2190 213 117 38 chr5 71134726 71135365 -131950167 - L1ME3 LINE L1 -18 6144 5455 2268 108 10 0 chr5 71136447 71136752 -131948780 - AluSx SINE Alu -4 308 1 578 156 0 10 chr5 71136822 71136918 -131948614 - MLT1A2 LTR MaLR -272 102 8 3849 215 66 62 chr5 71136932 71138125 -131947407 - MLT1A2-int LTR MaLR -8 1363 29 1388 203 56 39 chr5 71138125 71138484 -131947048 - MLT1A2 LTR MaLR -6 368 4 3207 42 0 0 chr5 71138528 71138914 -131946618 - L1PA4 LINE L1 -3 6152 5767 22 0 0 0 chr5 71138934 71138956 -131946576 + AT_rich Low_complexity Low_complexity 1 22 0 1904 134 0 0 chr5 71139197 71139474 -131946058 - AluSx SINE Alu -1 311 35 678 122 0 0 chr5 71140693 71140791 -131944741 - FLAM_A SINE Alu -14 128 31 2289 125 3 0 chr5 71141106 71141417 -131944115 - AluSx SINE Alu 0 312 1 225 203 0 0 chr5 71141417 71141465 -131944067 + CT-rich Low_complexity Low_complexity 11 61 0 361 265 200 18 chr5 71141528 71141698 -131943834 + MIR SINE MIR 4 204 -58 560 286 31 15 chr5 71141752 71141948 -131943584 + L1ME LINE L1 79 277 -5842 500 330 71 0 chr5 71141979 71142275 -131943257 + LTR33 LTR ERVL 3 344 -177 267 274 116 21 chr5 71142411 71142506 -131943026 + L1ME LINE L1 332 435 -5684 762 272 60 44 chr5 71142565 71143046 -131942486 + L1ME LINE L1 662 1150 -4969 256 277 27 40 chr5 71143060 71143208 -131942324 + L1ME LINE L1 1336 1481 -4829 309 307 127 20 chr5 71143588 71143738 -131941794 + L1ME LINE L1 5302 5467 -637 674 208 63 0 chr5 71143796 71143955 -131941577 - MER3 DNA MER1_type -87 122 1 554 288 84 23 chr5 71143955 71144264 -131941268 - L1ME LINE L1 -514 5656 5329 396 0 0 0 chr5 71144364 71144408 -131941124 + (CA)n Simple_repeat Simple_repeat 1 44 0 5227 152 30 49 chr5 71146196 71147287 -131938245 + MER11C LTR ERVK 1 1071 0 852 181 114 0 chr5 71148186 71148352 -131937180 + MER5A DNA MER1_type 1 185 -4 258 262 121 27 chr5 71148433 71148491 -131937041 + Charlie7 DNA MER1_type 2449 2500 -112 180 0 0 0 chr5 71148491 71148511 -131937021 + (TA)n Simple_repeat Simple_repeat 1 20 0 258 262 121 27 chr5 71148511 71148601 -131936931 + Charlie7 DNA MER1_type 2500 2611 -1 767 248 50 10 chr5 71149387 71149589 -131935943 + MIR SINE MIR 49 258 -4 469 256 143 48 chr5 71150317 71150485 -131935047 - MIR SINE MIR -56 206 23 272 267 76 38 chr5 71150777 71150882 -131934650 - L2 LINE L2 -1 3312 3204 2593 174 31 0 chr5 71151249 71151702 -131933830 + MLT1C LTR MaLR 1 467 0 464 268 150 42 chr5 71152701 71152995 -131932537 - MER102b DNA MER1_type -8 333 1 411 225 93 8 chr5 71153078 71153207 -131932325 - MIR SINE MIR -55 207 68 205 265 0 0 chr5 71153283 71153332 -131932200 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 29 28 0 0 chr5 71153436 71153472 -131932060 + AT_rich Low_complexity Low_complexity 1 36 0 275 355 21 11 chr5 71153623 71153716 -131931816 - L2 LINE L2 -36 3236 3143 4107 118 3 3 chr5 71154179 71154781 -131930751 - LTR43 LTR ERV1 0 602 1 1547 109 0 5 chr5 71154905 71155125 -131930407 + LTR43 LTR ERV1 112 330 -272 21 0 0 0 chr5 71155295 71155316 -131930216 + AT_rich Low_complexity Low_complexity 1 21 0 229 221 15 0 chr5 71156012 71156080 -131929452 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 92 0 0 chr5 71156730 71156795 -131928737 + AT_rich Low_complexity Low_complexity 1 65 0 445 279 85 18 chr5 71158233 71158398 -131927134 - MIR SINE MIR -59 203 28 2943 213 46 5 chr5 71158896 71159568 -131925964 - L1ME2 LINE L1 -10 6154 5455 3525 40 0 0 chr5 71160768 71161196 -131924336 - L1PA3 LINE L1 -3 6152 5725 651 116 21 0 chr5 71161519 71161614 -131923918 + U6 snRNA snRNA 9 105 -2 1734 100 4 15 chr5 71161619 71161890 -131923642 + L1MA6 LINE L1 6033 6300 0 276 161 0 0 chr5 71162217 71162279 -131923253 + (TG)n Simple_repeat Simple_repeat 2 63 0 634 260 143 39 chr5 71164279 71164714 -131920818 - MLT1K LTR MaLR -28 560 81 2279 80 7 13 chr5 71165104 71165404 -131920128 + AluY SINE Alu 1 298 -13 256 245 0 0 chr5 71165686 71165739 -131919793 + (CA)n Simple_repeat Simple_repeat 2 54 0 398 303 191 13 chr5 71166336 71166488 -131919044 + MER5A DNA MER1_type 10 188 -1 515 259 17 26 chr5 71166760 71166876 -131918656 + MER5A DNA MER1_type 1 115 -74 2376 107 0 0 chr5 71167211 71167521 -131918011 + AluSg SINE Alu 1 310 0 239 203 14 14 chr5 71168507 71168581 -131916951 + (TA)n Simple_repeat Simple_repeat 2 75 0 1905 154 3 0 chr5 71168879 71169164 -131916368 + AluJb SINE Alu 1 286 -26 287 278 56 0 chr5 71170963 71171053 -131914479 - L2 LINE L2 0 3313 3219 2101 106 0 3 chr5 71171054 71171337 -131914195 + AluSx SINE Alu 1 282 -30 220 186 34 17 chr5 71171396 71171455 -131914077 + GA-rich Low_complexity Low_complexity 2 61 0 358 343 42 24 chr5 71171455 71171668 -131913864 - L2 LINE L2 -121 3192 2976 395 242 212 0 chr5 71171866 71171998 -131913534 - MIR SINE MIR -23 239 80 237 330 11 0 chr5 71173377 71173468 -131912064 + GA-rich Low_complexity Low_complexity 2 93 0 405 304 110 99 chr5 71174251 71174705 -131910827 + L2 LINE L2 2814 3272 0 412 210 20 0 chr5 71174873 71174973 -131910559 - MLT1J2 LTR MaLR 0 450 349 479 279 6 25 chr5 71175009 71175167 -131910365 - MLT1J2 LTR MaLR -213 237 83 552 276 81 92 chr5 71175899 71176167 -131909365 + HAL1 LINE L1 826 1087 -1420 1884 221 74 10 chr5 71176167 71176655 -131908877 + LTR40a LTR ERVL 1 519 0 552 276 81 92 chr5 71176655 71176907 -131908625 + HAL1 LINE L1 1087 1340 -1167 1858 152 10 10 chr5 71176967 71177264 -131908268 + AluSx SINE Alu 6 302 -10 1142 228 45 66 chr5 71177265 71177600 -131907932 + L1MC4 LINE L1 7305 7629 -413 1734 166 38 7 chr5 71177600 71177889 -131907643 + AluJo SINE Alu 1 298 -14 1142 228 45 66 chr5 71177889 71178022 -131907510 + L1MC4 LINE L1 7629 7763 -279 486 330 48 48 chr5 71178078 71178179 -131907353 + HAL1 LINE L1 1525 1625 -882 186 43 0 0 chr5 71178179 71178202 -131907330 + (GA)n Simple_repeat Simple_repeat 2 24 0 486 330 48 48 chr5 71178202 71178415 -131907117 + HAL1 LINE L1 1624 1839 -668 390 297 105 7 chr5 71178682 71178968 -131906564 + L1MC/D LINE L1 4741 5054 -1092 433 285 112 15 chr5 71178969 71179230 -131906302 + L1MC/D LINE L1 5107 5389 -757 350 44 0 0 chr5 71179235 71179280 -131906252 + L1PA13 LINE L1 6100 6144 -19 592 279 22 48 chr5 71179288 71179600 -131905932 + L1MC/D LINE L1 5354 5661 -460 258 364 0 0 chr5 71179785 71179884 -131905648 - L2 LINE L2 -17 3296 3198 377 273 98 27 chr5 71181548 71181731 -131903801 + L2 LINE L2 3118 3313 0 26 0 0 0 chr5 71183483 71183509 -131902023 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 71183707 71183729 -131901803 + AT_rich Low_complexity Low_complexity 1 22 0 501 229 137 33 chr5 71184279 71184432 -131901100 + MER5B DNA MER1_type 4 172 -6 1512 168 56 3 chr5 71185560 71185845 -131899687 + L1PB4 LINE L1 5850 6149 -7 795 232 60 43 chr5 71186732 71186965 -131898567 - MIR SINE MIR -3 259 23 258 272 48 87 chr5 71187014 71187117 -131898415 + L2 LINE L2 3207 3305 -8 180 0 0 0 chr5 71187344 71187364 -131898168 + (GGA)n Simple_repeat Simple_repeat 2 21 0 699 308 40 8 chr5 71187672 71187919 -131897613 + MIR SINE MIR 8 262 0 29 60 0 0 chr5 71188424 71188474 -131897058 + AT_rich Low_complexity Low_complexity 1 50 0 227 310 0 0 chr5 71190455 71190513 -131895019 - L2 LINE L2 -10 3262 3205 204 246 82 16 chr5 71190560 71190621 -131894911 - MER5B DNA MER1_type -25 153 89 205 316 76 25 chr5 71190800 71190958 -131894574 - L2 LINE L2 -219 3053 2888 180 200 22 0 chr5 71191072 71191117 -131894415 - L2 LINE L2 -672 2642 2597 248 299 254 35 chr5 71191165 71191784 -131893748 - L2 LINE L2 -815 2499 1746 204 298 0 64 chr5 71192368 71192462 -131893070 + L2 LINE L2 3200 3287 -26 1014 133 50 0 chr5 71192470 71192650 -131892882 + MER5A DNA MER1_type 1 189 0 767 181 0 15 chr5 71192836 71192969 -131892563 + FLAM_C SINE Alu 1 131 -12 479 161 65 0 chr5 71193326 71193419 -131892113 + MER5A DNA MER1_type 1 99 -90 622 171 6 23 chr5 71193810 71193986 -131891546 + (TA)n Simple_repeat Simple_repeat 1 173 0 207 0 0 0 chr5 71193986 71194009 -131891523 + (GA)n Simple_repeat Simple_repeat 2 24 0 3704 116 11 67 chr5 71195204 71195850 -131889682 - MER4B LTR ERV1 0 610 1 414 303 98 60 chr5 71196501 71196735 -131888797 - MIR SINE MIR 0 262 20 965 212 32 23 chr5 71196801 71197018 -131888514 + MER20 DNA MER1_type 1 219 0 384 154 26 0 chr5 71198677 71198755 -131886777 + MER116 DNA Mariner 1 80 0 233 287 140 37 chr5 71199322 71199486 -131886046 - L3b LINE CR1 -197 1386 1206 221 326 32 0 chr5 71199565 71199660 -131885872 - L3b LINE CR1 -384 1199 1102 351 170 117 0 chr5 71200035 71200129 -131885403 - L1ME4a LINE L1 0 6121 6017 330 320 96 59 chr5 71200806 71201246 -131884286 + L1ME4a LINE L1 4795 5250 -896 414 326 65 0 chr5 71201355 71201493 -131884039 + L2 LINE L2 3154 3300 -13 188 67 33 0 chr5 71201493 71201523 -131884009 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 684 263 122 59 chr5 71201545 71202293 -131883239 + L1ME4a LINE L1 5303 6097 -24 889 171 50 39 chr5 71202326 71202584 -131882948 + L1ME4a LINE L1 5855 6115 -6 228 317 0 12 chr5 71202760 71202842 -131882690 + GA-rich Low_complexity Low_complexity 2 82 0 300 53 0 0 chr5 71203005 71203043 -131882489 + (CA)n Simple_repeat Simple_repeat 2 39 0 664 281 96 26 chr5 71203221 71203524 -131882008 + MLT1J LTR MaLR 14 337 -174 993 229 105 34 chr5 71203532 71203999 -131881533 - LTR24B LTR ERV1 -7 569 70 253 191 45 22 chr5 71204045 71204134 -131881398 - LTR24B LTR ERV1 -416 160 70 317 159 63 0 chr5 71204333 71204396 -131881136 + MIR SINE MIR 104 170 -92 378 238 50 33 chr5 71204498 71204679 -131880853 + L1ME3A LINE L1 4882 5065 -1081 959 271 23 40 chr5 71204719 71205073 -131880459 + L1ME3A LINE L1 5562 5909 -261 232 289 36 0 chr5 71205077 71205160 -131880372 - LTR16A1 LTR ERVL -371 86 1 273 241 99 49 chr5 71205204 71205366 -131880166 - HERV16 LTR ERVL -25 4971 4802 440 280 40 46 chr5 71206188 71206321 -131879211 - HERV16 LTR ERVL -1348 4306 4173 2431 182 25 47 chr5 71206321 71206837 -131878695 - MLT1D LTR MaLR 0 505 1 440 280 40 46 chr5 71206837 71206878 -131878654 - HERV16 LTR ERVL -1481 4173 4133 * 1008 280 32 86 chr5 71206875 71207500 -131878032 - HERV16 LTR ERVL -2345 3309 2719 21 0 0 0 chr5 71208073 71208094 -131877438 + AT_rich Low_complexity Low_complexity 1 21 0 649 300 64 26 chr5 71208151 71208859 -131876673 - HERV16 LTR ERVL -2692 2304 1720 2125 315 86 36 chr5 71208915 71210094 -131875438 - HERV16 LTR ERVL -3429 1567 331 298 181 12 84 chr5 71210407 71210490 -131875042 - LTR16A1 LTR ERVL 0 457 381 499 247 98 89 chr5 71210525 71210861 -131874671 - LTR16A1 LTR ERVL -118 339 1 791 265 75 12 chr5 71210874 71211127 -131874405 + L2 LINE L2 3041 3309 -4 1739 166 3 45 chr5 71211823 71212131 -131873401 - AluJb SINE Alu -17 295 1 195 42 0 0 chr5 71212139 71212163 -131873369 + (T)n Simple_repeat Simple_repeat 1 24 0 366 230 22 44 chr5 71212908 71213043 -131872489 + HAL1 LINE L1 799 930 -1577 730 31 21 0 chr5 71213219 71213316 -131872216 + (TAGA)n Simple_repeat Simple_repeat 2 100 0 1787 211 27 89 chr5 71213344 71213696 -131871836 + L1MB8 LINE L1 3806 4089 -2057 3025 181 51 16 chr5 71213696 71214368 -131871164 + L1MB8 LINE L1 5479 6173 -5 1787 211 27 89 chr5 71214368 71214755 -131870777 + L1MB8 LINE L1 4089 4499 -1647 * 4822 213 55 36 chr5 71214752 71216117 -131869415 + L1MC/D LINE L1 3777 5181 -1037 2127 131 13 3 chr5 71216117 71216415 -131869117 + AluSx SINE Alu 1 301 -11 4822 213 55 36 chr5 71216415 71216707 -131868825 + L1MC/D LINE L1 5181 5466 -752 1158 179 81 90 chr5 71217033 71217379 -131868153 + MER2 DNA MER2_type 1 343 -1 740 289 80 7 chr5 71217554 71217996 -131867536 + LTR33 LTR ERVL 2 502 -19 281 287 117 0 chr5 71218069 71218163 -131867369 - L2 LINE L2 0 3313 3209 2362 261 116 117 chr5 71218174 71219207 -131866325 - L2 LINE L2 -253 3060 2026 2229 120 0 0 chr5 71219207 71219507 -131866025 + AluSx SINE Alu 1 300 -12 2362 261 116 117 chr5 71219507 71220397 -131865135 - L2 LINE L2 -1287 2026 1136 1783 223 70 63 chr5 71220628 71220735 -131864797 - L1ME3 LINE L1 -9 6153 6048 1991 130 39 0 chr5 71220735 71220748 -131864784 - AluSx SINE Alu -17 295 284 207 0 0 0 chr5 71220748 71220771 -131864761 + (GA)n Simple_repeat Simple_repeat 1 23 0 1991 130 39 0 chr5 71220771 71221041 -131864491 - AluSx SINE Alu -28 284 1 1783 223 70 63 chr5 71221041 71221661 -131863871 - L1ME3 LINE L1 -114 6048 5421 2857 119 50 4 chr5 71221910 71222372 -131863160 - MER31A LTR ERV1 0 485 3 627 159 0 0 chr5 71223739 71223846 -131861686 - MER81 DNA DNA 0 114 8 1855 168 14 0 chr5 71228322 71228607 -131856925 + AluJb SINE Alu 1 289 -23 2433 92 0 0 chr5 71229117 71229422 -131856110 + AluY SINE Alu 1 305 -6 279 0 0 0 chr5 71229422 71229453 -131856079 + (TA)n Simple_repeat Simple_repeat 2 32 0 394 256 18 43 chr5 71229458 71229622 -131855910 + HAL1 LINE L1 2348 2507 0 371 278 51 74 chr5 71229636 71229812 -131855720 - HAL1 LINE L1 -1682 825 654 1861 144 7 7 chr5 71229961 71230276 -131855256 + AluSx SINE Alu 1 315 0 676 293 71 56 chr5 71230586 71230842 -131854690 + LTR33 LTR ERVL 140 404 -117 1489 196 67 12 chr5 71230842 71231188 -131854344 - MLT1A1 LTR MaLR 0 365 1 676 293 71 56 chr5 71231188 71231269 -131854263 + LTR33 LTR ERVL 404 482 -39 759 269 117 18 chr5 71232027 71232250 -131853282 + MIR SINE MIR 17 261 -1 2514 57 0 0 chr5 71232342 71232639 -131852893 + AluY SINE Alu 1 297 -14 216 97 0 0 chr5 71233039 71233070 -131852462 + (A)n Simple_repeat Simple_repeat 1 31 0 228 35 0 0 chr5 71233177 71233206 -131852326 + (TG)n Simple_repeat Simple_repeat 1 29 0 1245 251 39 50 chr5 71234059 71234517 -131851015 - LTR16A1 LTR ERVL -4 453 1 1317 258 110 85 chr5 71236141 71237390 -131848142 + L1MC4 LINE L1 6763 8042 0 3210 203 5 12 chr5 71237450 71238111 -131847421 + MSTB-int LTR MaLR 506 1161 -490 2058 145 47 33 chr5 71238112 71238656 -131846876 - MLT2A2 LTR ERVL 0 554 3 2275 186 44 17 chr5 71238665 71239139 -131846393 + MSTB-int LTR MaLR 1165 1651 0 2380 159 26 14 chr5 71239139 71239560 -131845972 + MSTB LTR MaLR 1 426 0 843 196 0 0 chr5 71239574 71239707 -131845825 - FLAM_C SINE Alu -10 133 1 326 250 75 2 chr5 71239823 71239973 -131845559 + MLT1F1 LTR MaLR 3 196 -371 645 217 22 49 chr5 71239975 71240159 -131845373 + MLT1F1 LTR MaLR 379 557 -10 672 248 41 20 chr5 71240187 71240433 -131845099 + L1ME4a LINE L1 5575 5825 -296 342 182 0 0 chr5 71240432 71240487 -131845045 - HAL1 LINE L1 -1653 854 800 * 1859 160 7 20 chr5 71240489 71240593 -131844939 + AluJb SINE Alu 11 115 -197 2338 130 3 35 chr5 71240593 71240969 -131844563 - THE1B LTR MaLR 0 364 1 1859 160 7 20 chr5 71240969 71241170 -131844362 + AluJb SINE Alu 115 312 0 307 329 43 43 chr5 71241174 71241429 -131844103 - HAL1 LINE L1 -1696 811 557 1845 146 102 6 chr5 71241474 71241809 -131843723 + MSTB LTR MaLR 53 419 -7 347 260 119 57 chr5 71242160 71242337 -131843195 - HAL1 LINE L1 -2078 429 242 443 196 43 0 chr5 71242342 71242434 -131843098 - MLT1D LTR MaLR -394 111 16 444 156 0 13 chr5 71242754 71242831 -131842701 + MLT1I LTR MaLR 1 76 -333 884 195 47 0 chr5 71242835 71243001 -131842531 - MLT1D LTR MaLR 0 505 331 868 221 20 55 chr5 71243001 71243417 -131842115 - MLT1A1 LTR MaLR 0 365 21 284 206 0 48 chr5 71243427 71243490 -131842042 - MLT1D LTR MaLR -162 343 284 * 312 190 0 0 chr5 71243487 71243545 -131841987 - MLT1A1 LTR MaLR -287 78 21 285 167 0 50 chr5 71243558 71243618 -131841914 - MLT1D LTR MaLR -165 340 284 * 324 190 0 0 chr5 71243615 71243673 -131841859 - MLT1A1 LTR MaLR -287 78 21 1089 222 12 64 chr5 71243683 71244012 -131841520 - MLT1D LTR MaLR -162 343 32 2122 109 3 0 chr5 71244012 71244332 -131841200 - AluSx SINE Alu 0 321 1 2061 104 4 4 chr5 71244556 71244863 -131840669 - AluSc SINE Alu 0 307 1 21 71 0 0 chr5 71244930 71244972 -131840560 + AT_rich Low_complexity Low_complexity 1 42 0 486 304 103 30 chr5 71245084 71245370 -131840162 - HAL1b LINE L1 -741 1669 308 363 256 54 135 chr5 71245377 71245674 -131839858 - HAL1 LINE L1 -1165 1342 1070 227 330 64 16 chr5 71246460 71246648 -131838884 - L1ME LINE L1 -552 5569 5373 279 0 0 0 chr5 71247277 71247308 -131838224 + (A)n Simple_repeat Simple_repeat 1 31 0 225 340 0 21 chr5 71248871 71248965 -131836567 + GA-rich Low_complexity Low_complexity 2 93 0 341 317 55 62 chr5 71249086 71249231 -131836301 - L2 LINE L2 -2 3270 3127 4028 240 63 22 chr5 71249286 71249997 -131835535 + L2 LINE L2 1805 2485 -828 1869 121 82 7 chr5 71249997 71250278 -131835254 + AluSx SINE Alu 1 302 -10 4028 240 63 22 chr5 71250278 71251017 -131834515 + L2 LINE L2 2485 3313 0 201 250 71 83 chr5 71251015 71251099 -131834433 - L2 LINE L2 0 3272 3190 * 195 295 16 0 chr5 71251235 71251296 -131834236 - L2 LINE L2 -559 2755 2694 2300 114 0 0 chr5 71251304 71251602 -131833930 + AluSx SINE Alu 1 298 -14 495 199 55 89 chr5 71252120 71252266 -131833266 + MER5B DNA MER1_type 1 141 -37 336 294 0 11 chr5 71254063 71254196 -131831336 - MLT1I LTR MaLR -232 177 81 1079 240 139 18 chr5 71254461 71254916 -131830616 + MLT1F1 LTR MaLR 3 512 -55 235 245 0 0 chr5 71255566 71255615 -131829917 + L2 LINE L2 3223 3271 -1 204 54 36 71 chr5 71256229 71256285 -131829247 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1250 194 0 8 chr5 71256455 71256697 -131828835 + MLT2D LTR ERVL 1 240 -174 2524 90 62 3 chr5 71256725 71257079 -131828453 + THE1C LTR MaLR 1 375 0 234 331 16 33 chr5 71257143 71257264 -131828268 - LTR16B LTR ERVL -309 155 37 1046 281 39 18 chr5 71257432 71257766 -131827766 + MLT2F LTR ERVL 1 341 -322 1976 193 127 4 chr5 71257766 71257806 -131827726 - MLT2B1 LTR ERVL 0 520 486 629 47 12 0 chr5 71257806 71257891 -131827641 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 1976 193 127 4 chr5 71257891 71258307 -131827225 - MLT2B1 LTR ERVL -34 486 8 1327 209 18 33 chr5 71258315 71258646 -131826886 + MLT2F LTR ERVL 338 663 0 395 277 44 7 chr5 71258746 71258883 -131826649 - MER117 DNA MER1_type -2 195 54 480 191 29 19 chr5 71259109 71259214 -131826318 + MLT1C LTR MaLR 1 106 -399 1125 187 132 0 chr5 71259219 71259454 -131826078 - AluJo SINE Alu -18 294 29 828 216 40 95 chr5 71259461 71259650 -131825882 + MLT1C LTR MaLR 110 269 -198 2676 205 12 8 chr5 71259650 71260167 -131825365 - LTR53 LTR ERVL 0 519 1 828 216 40 95 chr5 71260167 71260356 -131825176 + MLT1C LTR MaLR 269 467 0 2028 80 109 0 chr5 71261405 71261680 -131823852 + AluSg SINE Alu 1 305 -5 408 163 0 0 chr5 71261728 71261808 -131823724 - L1MB8 LINE L1 0 6178 6099 522 242 205 5 chr5 71262230 71262445 -131823087 + HAL1 LINE L1 640 897 -1610 304 59 39 0 chr5 71262446 71262497 -131823035 + (CA)n Simple_repeat Simple_repeat 2 54 0 397 283 93 60 chr5 71262528 71262797 -131822735 + HAL1 LINE L1 2047 2324 -183 2148 85 3 39 chr5 71263288 71263595 -131821937 - AluSc SINE Alu -13 296 1 316 212 53 128 chr5 71263941 71264167 -131821365 + HAL1 LINE L1 2299 2507 0 668 118 0 9 chr5 71264305 71264415 -131821117 + (TTTC)n Simple_repeat Simple_repeat 1 109 0 414 248 48 0 chr5 71264437 71264542 -131820990 - FLAM_A SINE Alu -32 110 1 1416 75 0 35 chr5 71264575 71264775 -131820757 + MER107 DNA MER1_type 5 197 0 2574 48 0 0 chr5 71264892 71265203 -131820329 - AluY SINE Alu 0 311 1 2870 137 32 40 chr5 71268357 71268881 -131816651 - MLT2B1 LTR ERVL 0 520 1 2021 217 69 25 chr5 71269236 71270034 -131815498 - MER97c DNA MER1_type? 0 894 25 21 36 0 0 chr5 71270346 71270374 -131815158 + AT_rich Low_complexity Low_complexity 1 28 0 2201 115 3 3 chr5 71270895 71271208 -131814324 + AluSp SINE Alu 1 313 0 363 136 0 0 chr5 71271208 71271267 -131814265 + (GA)n Simple_repeat Simple_repeat 1 59 0 948 86 34 17 chr5 71271269 71271444 -131814088 + GA-rich Low_complexity Low_complexity 3 180 0 1736 158 117 17 chr5 71271797 71272157 -131813375 - MSTD LTR MaLR 0 396 1 851 155 0 0 chr5 71273209 71273338 -131812194 - FLAM_A SINE Alu -4 129 1 815 271 35 16 chr5 71273537 71273792 -131811740 + MIR SINE MIR 1 260 -2 462 311 101 9 chr5 71274355 71274574 -131810958 - MLT1L LTR MaLR -7 608 370 2363 211 111 25 chr5 71275823 71275922 -131809610 - MER20B DNA MER1_type -5 778 689 1953 151 10 77 chr5 71275922 71276340 -131809192 + MLT1B LTR MaLR 1 390 0 2363 211 111 25 chr5 71276340 71276946 -131808586 - MER20B DNA MER1_type -94 689 13 1256 161 91 12 chr5 71277263 71277517 -131808015 + L1MEc LINE L1 538 811 -5585 361 328 138 55 chr5 71278401 71278727 -131806805 - L1M2 LINE L1 -5849 1000 648 252 0 0 0 chr5 71279324 71279352 -131806180 + (TG)n Simple_repeat Simple_repeat 2 29 0 2520 66 0 0 chr5 71280953 71281256 -131804276 - AluY SINE Alu -8 303 1 2121 111 3 3 chr5 71282951 71283248 -131802284 + AluSx SINE Alu 1 297 -15 7764 56 126 40 chr5 71283973 71285135 -131800397 + MER11A LTR ERVK 1 1262 -4 241 265 73 15 chr5 71286110 71286178 -131799354 - MER5A DNA MER1_type -2 187 116 1034 263 146 16 chr5 71286191 71286799 -131798733 + L2 LINE L2 2629 3306 -7 200 260 0 0 chr5 71286869 71286919 -131798613 - L2 LINE L2 -7 3265 3216 1859 142 49 52 chr5 71288247 71288373 -131797159 + MER2 DNA MER2_type 1 126 -219 1895 141 3 11 chr5 71288373 71288681 -131796851 - AluSx SINE Alu 0 306 1 1859 142 49 52 chr5 71288681 71288699 -131796833 + MER2 DNA MER2_type 126 143 -202 2076 166 9 9 chr5 71288699 71289036 -131796496 - MER1B DNA MER1_type 0 337 1 1859 142 49 52 chr5 71289036 71289234 -131796298 + MER2 DNA MER2_type 143 344 -1 2307 89 3 0 chr5 71290175 71290468 -131795064 - AluSp SINE Alu -19 294 1 538 286 64 43 chr5 71290655 71291138 -131794394 - L1M4 LINE L1 -1095 5051 4559 269 109 87 0 chr5 71291438 71291484 -131794048 - MADE1 DNA Mariner 0 80 31 24 32 0 0 chr5 71292576 71292607 -131792925 + AT_rich Low_complexity Low_complexity 1 31 0 2549 79 43 72 chr5 71293664 71293845 -131791687 - MER4A LTR ERV1 0 664 479 1837 151 7 7 chr5 71293845 71294130 -131791402 + AluSx SINE Alu 1 285 -27 2549 79 43 72 chr5 71294130 71294364 -131791168 - MER4A LTR ERV1 -185 479 261 661 96 0 48 chr5 71294364 71294468 -131791064 - MER4A LTR ERV1 -565 99 1 11768 121 58 18 chr5 71294474 71295211 -131790321 - MER4A-int LTR ERV1 -2 6596 5890 207 0 0 0 chr5 71295211 71295234 -131790298 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 11768 121 58 18 chr5 71295234 71296589 -131788943 - MER4A-int LTR ERV1 -708 5890 4421 11174 29 4 1 chr5 71297001 71299112 -131786420 - L1PA2 LINE L1 0 6155 4043 36280 38 29 2 chr5 71299218 71303700 -131781832 - L1P LINE L1 -1540 4606 3 260 231 56 65 chr5 71304359 71304467 -131781065 - L1ME LINE L1 -220 5901 5795 279 254 120 21 chr5 71304486 71304628 -131780904 - L1ME LINE L1 -363 5758 5603 893 249 256 30 chr5 71304970 71305710 -131779822 - L2 LINE L2 0 3313 2414 383 233 248 0 chr5 71305731 71305864 -131779668 - L2 LINE L2 -1255 2059 1894 283 150 0 0 chr5 71307513 71307553 -131777979 - 5S rRNA rRNA -79 42 3 827 141 96 34 chr5 71307720 71307897 -131777635 + MER3 DNA MER1_type 12 199 -10 2292 98 0 0 chr5 71309148 71309443 -131776089 - AluSx SINE Alu -17 295 1 739 355 59 40 chr5 71309553 71309979 -131775553 + L2 LINE L2 2837 3270 -2 437 259 52 37 chr5 71310494 71310629 -131774903 - MIR3 SINE MIR -9 199 63 26 0 0 0 chr5 71311084 71311110 -131774422 + AT_rich Low_complexity Low_complexity 1 26 0 234 88 0 0 chr5 71311123 71311157 -131774375 - HY3 scRNA scRNA -1 100 67 225 270 0 0 chr5 71313062 71313173 -131772359 + T-rich Low_complexity Low_complexity 1 111 0 210 171 0 0 chr5 71314740 71314775 -131770757 + A-rich Low_complexity Low_complexity 1 35 0 2217 92 9 28 chr5 71315321 71315638 -131769894 - AluSq SINE Alu -2 311 1 2089 79 0 4 chr5 71315798 71316065 -131769467 + AluY SINE Alu 38 303 -8 1740 126 65 0 chr5 71316069 71316398 -131769134 - MER47A DNA MER2_type 0 366 1 222 37 0 0 chr5 71316995 71317022 -131768510 + (TA)n Simple_repeat Simple_repeat 1 27 0 1496 165 58 55 chr5 71317022 71317313 -131768219 - AluJo SINE Alu -18 294 3 27 62 0 0 chr5 71317472 71317520 -131768012 + AT_rich Low_complexity Low_complexity 1 48 0 256 282 0 0 chr5 71317575 71317646 -131767886 + T-rich Low_complexity Low_complexity 1 71 0 1308 84 17 6 chr5 71318379 71318558 -131766974 + AluSq SINE Alu 1 181 -132 449 262 104 43 chr5 71318640 71318804 -131766728 - L2 LINE L2 -1 3271 3098 185 257 34 200 chr5 71318798 71319063 -131766469 - L2 LINE L2 -339 2975 2755 * 1614 319 211 18 chr5 71319186 71320737 -131764795 - L2 LINE L2 -821 2493 644 1446 175 4 34 chr5 71320738 71321007 -131764525 + AluJo SINE Alu 39 299 -13 2924 234 80 15 chr5 71321784 71322791 -131762741 + L1MD1 LINE L1 4205 5277 -869 219 261 0 0 chr5 71322818 71322864 -131762668 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 3036 192 111 11 chr5 71322889 71323671 -131761861 + L1MD1 LINE L1 5383 6242 0 285 156 312 0 chr5 71323666 71323743 -131761789 - L1M4 LINE L1 -1286 4860 4760 * 5287 244 95 43 chr5 71323845 71326010 -131759522 - L1M4 LINE L1 -1411 4735 2442 2225 114 0 3 chr5 71326010 71326308 -131759224 - AluSx SINE Alu -15 297 1 5287 244 95 43 chr5 71326308 71326447 -131759085 - L1M4 LINE L1 -3704 2442 2312 4220 214 48 30 chr5 71326648 71327908 -131757624 + L1 LINE L1 2647 3929 -2217 2283 203 30 0 chr5 71327914 71328381 -131757151 + L1 LINE L1 4519 4999 -1147 1181 234 31 26 chr5 71328382 71328732 -131756800 - HAL1 LINE L1 -860 1647 1296 1837 242 85 10 chr5 71328824 71329307 -131756225 - HAL1 LINE L1 -1986 521 3 213 286 48 79 chr5 71330191 71330317 -131755215 - MIR3 SINE MIR -42 166 45 190 313 0 0 chr5 71330414 71330462 -131755070 + MIR SINE MIR 59 106 -156 306 260 48 29 chr5 71331337 71331441 -131754091 - L1MC5 LINE L1 -49 7912 7807 390 287 97 23 chr5 71331661 71331877 -131753655 - L1ME3A LINE L1 -292 5878 5647 315 256 33 83 chr5 71332102 71332223 -131753309 - L1MEd LINE L1 -5737 382 268 397 282 46 36 chr5 71332448 71332643 -131752889 - L1MEd LINE L1 -3227 2902 2706 2029 158 36 0 chr5 71332679 71333009 -131752523 + MER7A DNA MER2_type 1 340 -6 3380 182 54 10 chr5 71333377 71334080 -131751452 + MER50 LTR ERV1 1 734 0 316 117 33 17 chr5 71334110 71334170 -131751362 - MER116 DNA Mariner -4 76 16 317 297 149 75 chr5 71334298 71334722 -131750810 - L1MEd LINE L1 -5550 569 115 2033 140 14 0 chr5 71334855 71335147 -131750385 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr5 71335220 71335241 -131750291 + AT_rich Low_complexity Low_complexity 1 21 0 2435 170 58 23 chr5 71335464 71336225 -131749307 + L1MB4 LINE L1 4682 5466 -714 2626 207 53 98 chr5 71336237 71337078 -131748454 - MER21B LTR ERV1 -48 815 12 2965 189 44 28 chr5 71337106 71337233 -131748299 + L1MB4 LINE L1 5478 5601 -579 2104 99 0 23 chr5 71337233 71337535 -131747997 + AluY SINE Alu 1 295 -16 2965 189 44 28 chr5 71337535 71338093 -131747439 + L1MB4 LINE L1 5601 6174 -6 192 333 0 0 chr5 71338141 71338198 -131747334 + MIR SINE MIR 40 96 -166 788 227 67 27 chr5 71338216 71338441 -131747091 - MIR SINE MIR 0 262 29 441 0 0 0 chr5 71338648 71338697 -131746835 + (TAA)n Simple_repeat Simple_repeat 3 51 0 1843 165 0 13 chr5 71339026 71339329 -131746203 - AluJo SINE Alu -13 299 1 183 318 47 0 chr5 71339582 71339667 -131745865 - L3b LINE CR1 -341 1242 1154 303 324 170 48 chr5 71340147 71340882 -131744650 + L2 LINE L2 1278 2102 -1212 446 262 91 46 chr5 71341134 71341321 -131744211 - MER20B DNA MER1_type -21 198 1 2538 66 0 0 chr5 71341735 71342039 -131743493 - AluY SINE Alu -7 304 1 23 33 0 0 chr5 71343371 71343401 -131742131 + AT_rich Low_complexity Low_complexity 1 30 0 1653 180 17 3 chr5 71344052 71344347 -131741185 - AluJo SINE Alu -11 301 3 5300 103 26 5 chr5 71344508 71345304 -131740228 + L1PA16 LINE L1 5352 6164 -2 204 179 0 0 chr5 71345420 71345459 -131740073 + (TA)n Simple_repeat Simple_repeat 1 39 0 2216 147 15 2 chr5 71345733 71346127 -131739405 - L1MB4 LINE L1 -1 6179 5781 2236 93 0 3 chr5 71346202 71346493 -131739039 - AluY SINE Alu 0 311 22 23 0 0 0 chr5 71346561 71346584 -131738948 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 71346606 71346634 -131738898 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 71346679 71346702 -131738830 + AT_rich Low_complexity Low_complexity 1 23 0 1299 174 83 30 chr5 71346720 71346984 -131738548 + AluJo SINE Alu 5 282 -30 2399 70 0 22 chr5 71347450 71347764 -131737768 - AluY SINE Alu -4 307 1 1500 111 0 0 chr5 71347765 71347964 -131737568 - AluSg/x SINE Alu -20 292 94 386 254 102 0 chr5 71348761 71348879 -131736653 + LTR67 LTR ERVL 428 557 0 1639 247 125 27 chr5 71349216 71349832 -131735700 + L1MC4a LINE L1 5258 5937 -1871 3858 91 39 4 chr5 71349832 71350392 -131735140 + LTR19B LTR ERV1 1 580 0 2061 140 20 31 chr5 71350941 71351292 -131734240 - MER7A DNA MER2_type 0 346 2 2094 134 0 0 chr5 71352358 71352648 -131732884 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr5 71352648 71352679 -131732853 + AT_rich Low_complexity Low_complexity 1 31 0 2096 104 3 32 chr5 71352845 71353153 -131732379 + AluY SINE Alu 1 299 -12 261 135 289 0 chr5 71353364 71353416 -131732116 + MER30 DNA MER1_type 1 67 -163 907 118 56 0 chr5 71353685 71353829 -131731703 + MER30 DNA MER1_type 64 215 -15 202 207 103 52 chr5 71354546 71354604 -131730928 - L2 LINE L2 -84 3229 3169 818 309 146 24 chr5 71355589 71356252 -131729280 + L2 LINE L2 2074 2817 -497 621 271 135 13 chr5 71356279 71356508 -131729024 + MIR SINE MIR 6 262 0 515 334 63 28 chr5 71356725 71357042 -131728490 + L2 LINE L2 2925 3252 -20 233 219 62 0 chr5 71357173 71357237 -131728295 + MER103 DNA DNA 8 75 -91 425 284 34 47 chr5 71357521 71357669 -131727863 - MIR3 SINE MIR -12 196 51 515 316 52 65 chr5 71359115 71359425 -131726107 - L2 LINE L2 -1 3271 2966 257 238 12 50 chr5 71359912 71359992 -131725540 - MER20 DNA MER1_type -142 77 1 349 257 156 84 chr5 71360015 71360327 -131725205 + L2 LINE L2 2922 3313 0 356 269 51 51 chr5 71360493 71360690 -131724842 - L2 LINE L2 -2 3311 3115 257 260 14 0 chr5 71361194 71361267 -131724265 - Charlie7 DNA MER1_type -1851 761 688 914 249 48 9 chr5 71361530 71361759 -131723773 - MIR SINE MIR 0 262 25 237 242 84 32 chr5 71361795 71361890 -131723642 + Charlie7 DNA MER1_type 1 100 -2512 23 33 0 0 chr5 71361896 71361926 -131723606 + AT_rich Low_complexity Low_complexity 1 30 0 1954 139 19 16 chr5 71361934 71362243 -131723289 + AluSx SINE Alu 3 312 0 2270 92 0 3 chr5 71362247 71362539 -131722993 + AluSg SINE Alu 3 293 -17 702 256 130 5 chr5 71362578 71362909 -131722623 + Charlie7 DNA MER1_type 325 761 -1851 1285 118 11 0 chr5 71362915 71363102 -131722430 + L1MB7 LINE L1 5863 6051 -133 1026 216 53 13 chr5 71363749 71363976 -131721556 - AluJo SINE Alu -16 296 61 22 35 0 0 chr5 71364241 71364270 -131721262 + AT_rich Low_complexity Low_complexity 1 29 0 336 276 207 6 chr5 71365303 71365477 -131720055 - MARNA DNA Mariner -59 527 319 489 17 0 0 chr5 71365654 71365712 -131719820 + (GA)n Simple_repeat Simple_repeat 1 58 0 235 257 0 0 chr5 71367216 71367286 -131718246 + CT-rich Low_complexity Low_complexity 1 70 0 226 320 72 10 chr5 71367287 71367384 -131718148 + L2 LINE L2 2637 2739 -575 259 239 136 11 chr5 71367988 71368076 -131717456 + L2 LINE L2 3215 3313 0 484 298 111 0 chr5 71368083 71368254 -131717278 - MLT1L LTR MaLR -10 605 416 2713 158 30 27 chr5 71368473 71368648 -131716884 - L1MB5 LINE L1 -6 6168 5995 1967 127 46 35 chr5 71368648 71369019 -131716513 + THE1C LTR MaLR 1 375 0 2713 158 30 27 chr5 71369019 71369368 -131716164 - L1MB5 LINE L1 -179 5995 5642 369 186 48 14 chr5 71369483 71369628 -131715904 + (TA)n Simple_repeat Simple_repeat 2 151 0 255 125 0 0 chr5 71369637 71369677 -131715855 + (CA)n Simple_repeat Simple_repeat 2 41 0 25 51 0 0 chr5 71370000 71370039 -131715493 + AT_rich Low_complexity Low_complexity 1 39 0 1096 179 41 0 chr5 71370246 71370441 -131715091 - MER20 DNA MER1_type 0 219 17 23 0 0 0 chr5 71370697 71370720 -131714812 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr5 71370846 71370885 -131714647 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2218 96 0 0 chr5 71370968 71371302 -131714230 + AluSx SINE Alu 1 334 0 445 204 44 9 chr5 71373957 71374070 -131711462 + MIR SINE MIR 105 221 -41 24 53 0 0 chr5 71374164 71374202 -131711330 + AT_rich Low_complexity Low_complexity 1 38 0 240 392 20 0 chr5 71374718 71374820 -131710712 + L3b LINE CR1 1148 1251 -332 2230 108 0 3 chr5 71374820 71375125 -131710407 + AluY SINE Alu 2 305 -6 252 213 13 93 chr5 71375220 71375295 -131710237 + MIR SINE MIR 124 192 -70 323 143 20 0 chr5 71375709 71375758 -131709774 - THE1A LTR MaLR 0 355 306 1935 129 40 35 chr5 71375783 71376156 -131709376 - THE1C LTR MaLR 0 375 1 243 0 0 0 chr5 71376161 71376188 -131709344 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 201 147 0 0 chr5 71376485 71376519 -131709013 + (T)n Simple_repeat Simple_repeat 1 34 0 278 247 21 82 chr5 71376632 71376729 -131708803 + L2 LINE L2 3174 3264 -8 500 280 45 55 chr5 71376967 71377167 -131708365 - MIR SINE MIR -56 206 9 497 313 20 20 chr5 71378371 71378521 -131707011 - MIR SINE MIR -66 196 47 208 409 41 6 chr5 71379455 71379626 -131705906 + L2 LINE L2 2511 2687 -627 364 360 7 7 chr5 71379750 71379900 -131705632 + MER5B DNA MER1_type 2 151 -27 250 328 116 4 chr5 71380326 71380490 -131705042 + MIR3 SINE MIR 2 181 -72 411 200 168 0 chr5 71381650 71381745 -131703787 - MIR3 SINE MIR -3 205 95 * 743 277 62 13 chr5 71381741 71381965 -131703567 + L3 LINE CR1 354 588 -989 564 328 68 32 chr5 71382011 71382349 -131703183 + L3 LINE CR1 931 1280 -297 2320 166 51 41 chr5 71382957 71383450 -131702082 - MLT1D LTR MaLR -2 503 6 444 307 128 35 chr5 71383495 71383613 -131701919 + L3 LINE CR1 1296 1402 -175 384 22 0 0 chr5 71383613 71383658 -131701874 + (TG)n Simple_repeat Simple_repeat 2 46 0 444 307 128 35 chr5 71383658 71383796 -131701736 + L3 LINE CR1 1402 1576 -1 2259 118 58 97 chr5 71383812 71384295 -131701237 - MLT2C2 LTR ERVL 0 464 1 773 203 6 0 chr5 71384358 71384535 -131700997 + CT-rich Low_complexity Low_complexity 2 179 0 21 36 0 0 chr5 71384820 71384848 -131700684 + AT_rich Low_complexity Low_complexity 1 28 0 593 162 34 0 chr5 71385269 71385386 -131700146 - L1MA8 LINE L1 -70 6221 6101 542 213 109 74 chr5 71386716 71386918 -131698614 + MIR SINE MIR 38 246 -16 2237 95 0 0 chr5 71386921 71387204 -131698328 + AluSc SINE Alu 1 283 -26 493 303 171 36 chr5 71389187 71389857 -131695675 - L2 LINE L2 -185 3087 2315 413 341 100 0 chr5 71390064 71390234 -131695298 - MER5A DNA MER1_type -2 187 1 973 254 44 53 chr5 71390385 71390727 -131694805 - L2 LINE L2 -40 3273 2935 183 100 0 0 chr5 71391142 71391172 -131694360 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 21 36 0 0 chr5 71392593 71392621 -131692911 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 71392641 71392666 -131692866 + AT_rich Low_complexity Low_complexity 1 25 0 275 137 98 0 chr5 71393104 71393155 -131692377 - MLT1A2 LTR MaLR -12 362 307 21 0 0 0 chr5 71393327 71393348 -131692184 + AT_rich Low_complexity Low_complexity 1 21 0 889 138 88 13 chr5 71393735 71393894 -131691638 + FRAM SINE Alu 1 164 -12 187 359 48 21 chr5 71394881 71395026 -131690506 + L2 LINE L2 1750 1898 -1416 609 257 164 0 chr5 71395134 71395286 -131690246 + MER5A DNA MER1_type 10 186 -3 259 308 117 17 chr5 71395677 71395797 -131689735 + L2 LINE L2 3182 3313 0 23 0 0 0 chr5 71395797 71395820 -131689712 + AT_rich Low_complexity Low_complexity 1 23 0 466 305 0 0 chr5 71395833 71395964 -131689568 - MER5B DNA MER1_type -1 177 58 629 189 33 99 chr5 71395964 71396207 -131689325 - L1ME3A LINE L1 0 6170 5944 * 998 171 68 24 chr5 71396199 71396416 -131689116 - L1MA7 LINE L1 -2 6289 6058 2125 117 0 0 chr5 71396416 71396715 -131688817 - AluY SINE Alu -12 299 1 998 171 68 24 chr5 71396715 71396749 -131688783 - L1MA7 LINE L1 -233 6058 6027 * 5135 158 14 12 chr5 71396745 71397691 -131687841 - L1 LINE L1 -792 5354 4407 192 310 17 0 chr5 71397738 71397796 -131687736 - MER5B DNA MER1_type -113 65 7 307 350 60 30 chr5 71447896 71448096 -131637436 + L3 LINE CR1 1291 1496 -81 303 339 62 0 chr5 71448249 71448361 -131637171 - MER91A DNA MER1_type -73 123 5 494 360 28 23 chr5 71448361 71448575 -131636957 - MIR SINE MIR -28 234 20 300 284 57 7 chr5 71449014 71449155 -131636377 - L2 LINE L2 -772 2542 2395 381 217 49 21 chr5 71449242 71449385 -131636147 + LTR16A LTR ERVL 304 450 0 1090 180 15 0 chr5 71451061 71451261 -131634271 + MER58A DNA MER1_type 22 224 0 381 303 57 57 chr5 71451509 71451773 -131633759 - L3 LINE CR1 -43 1534 1271 272 350 24 24 chr5 71451887 71452010 -131633522 - MIR SINE MIR -98 164 42 1203 256 51 6 chr5 71452524 71452856 -131632676 + MLT1I LTR MaLR 63 409 0 540 68 0 0 chr5 71453103 71453176 -131632356 + (CTA)n Simple_repeat Simple_repeat 3 75 0 234 174 0 0 chr5 71453244 71453290 -131632242 - MIR SINE MIR -115 147 102 322 315 31 39 chr5 71453619 71453746 -131631786 - MIR SINE MIR -135 127 2 494 270 49 25 chr5 71454167 71454330 -131631202 + MIR SINE MIR 96 262 0 180 0 0 0 chr5 71454950 71454970 -131630562 + (T)n Simple_repeat Simple_repeat 1 20 0 504 326 0 0 chr5 71455684 71455831 -131629701 - MIR SINE MIR -113 149 3 288 98 0 0 chr5 71456699 71456750 -131628782 - L1MB2 LINE L1 -2 6169 6119 1006 167 65 4 chr5 71456750 71457106 -131628426 - MSTB LTR MaLR 0 426 1 3211 175 49 2 chr5 71457116 71457744 -131627788 - L1MB2 LINE L1 -65 6106 5449 333 68 0 0 chr5 71459699 71459743 -131625789 + (TG)n Simple_repeat Simple_repeat 2 45 0 1750 304 53 26 chr5 71461252 71462053 -131623479 + L1M3b LINE L1 55 761 -5520 1519 296 38 60 chr5 71462023 71462737 -131622795 + L1M3b LINE L1 613 1310 -4971 * 299 143 0 0 chr5 71463195 71463244 -131622288 - MER66B LTR ERV1 -140 346 298 628 311 58 9 chr5 71464024 71464249 -131621283 - MIR SINE MIR -7 255 20 270 297 102 55 chr5 71465604 71465732 -131619800 + MIR SINE MIR 57 190 -72 1432 266 25 16 chr5 71465974 71466534 -131618998 + L1M3b LINE L1 1477 2041 -4310 9266 207 41 11 chr5 71466844 71467067 -131618465 + L1M3b LINE L1 2100 2315 -4035 2448 109 0 0 chr5 71467067 71467378 -131618154 + AluSx SINE Alu 1 311 -1 9266 207 41 11 chr5 71467378 71469747 -131615785 + L1M3b LINE L1 2315 4767 -1583 1055 147 35 5 chr5 71469749 71469946 -131615586 + MSTA LTR MaLR 1 203 -225 260 164 123 27 chr5 71469983 71470056 -131615476 + THE1C LTR MaLR 2 81 -294 279 0 0 0 chr5 71470156 71470187 -131615345 + (A)n Simple_repeat Simple_repeat 1 31 0 333 0 0 0 chr5 71470187 71470224 -131615308 + (TA)n Simple_repeat Simple_repeat 1 37 0 340 353 62 47 chr5 71470470 71470728 -131614804 - L2 LINE L2 -557 2757 2496 405 339 24 44 chr5 71470754 71470841 -131614691 + L2 LINE L2 2304 2391 -923 1420 240 17 47 chr5 71470841 71471249 -131614283 - MSTD LTR MaLR 0 396 1 405 339 24 44 chr5 71471249 71471409 -131614123 + L2 LINE L2 2391 2546 -768 2338 101 0 13 chr5 71471456 71471772 -131613760 - AluSp SINE Alu -1 312 1 878 206 56 33 chr5 71471806 71472020 -131613512 + MER58A DNA MER1_type 6 224 0 2243 115 3 0 chr5 71472089 71472394 -131613138 - AluY SINE Alu -5 306 1 757 199 17 34 chr5 71472396 71472572 -131612960 - AluJb SINE Alu -18 294 122 13902 93 0 0 chr5 71472690 71475436 -131610096 + L1PA7 LINE L1 3416 6166 0 336 178 14 14 chr5 71475436 71475509 -131610023 + L1MC4 LINE L1 7227 7299 -743 424 231 138 93 chr5 71475512 71475736 -131609796 + L1MC4 LINE L1 7649 7894 -148 2402 94 7 0 chr5 71475736 71476043 -131609489 + AluSg SINE Alu 1 309 -1 424 231 138 93 chr5 71476043 71476151 -131609381 + L1MC4 LINE L1 7894 7996 -46 883 129 7 7 chr5 71476252 71476399 -131609133 + THE1C LTR MaLR 233 373 -2 5230 168 35 27 chr5 71476404 71478100 -131607432 + L1MA7 LINE L1 4573 6281 -10 2063 116 7 3 chr5 71478892 71479186 -131606346 - AluSx SINE Alu -17 295 1 24 0 0 0 chr5 71479189 71479213 -131606319 + AT_rich Low_complexity Low_complexity 1 24 0 505 253 0 58 chr5 71479446 71479600 -131605932 + L3 LINE CR1 1260 1404 -173 588 226 15 0 chr5 71479700 71479837 -131605695 - L1MA7 LINE L1 -126 6165 6027 192 273 0 0 chr5 71479875 71479919 -131605613 - L2 LINE L2 -6 3307 3264 1786 216 30 9 chr5 71481289 71481720 -131603812 - L1M4 LINE L1 -3060 3086 2647 343 298 40 24 chr5 71481965 71482089 -131603443 - MIR SINE MIR -117 145 20 198 0 0 0 chr5 71482774 71482796 -131602736 + (TTG)n Simple_repeat Simple_repeat 2 23 0 688 186 155 0 chr5 71483324 71483485 -131602047 + MER5A DNA MER1_type 4 189 0 224 232 179 71 chr5 71483746 71483858 -131601674 + MIR SINE MIR 108 231 -31 21 0 0 0 chr5 71485305 71485326 -131600206 + AT_rich Low_complexity Low_complexity 1 21 0 192 216 0 0 chr5 71486059 71486096 -131599436 - MER5B DNA MER1_type 0 178 142 264 270 0 14 chr5 71486125 71486199 -131599333 + MER5B DNA MER1_type 106 178 0 254 409 53 0 chr5 71487772 71487904 -131597628 - L2 LINE L2 -32 3240 3102 371 129 65 0 chr5 71487992 71488054 -131597478 - MER116 DNA Mariner -3 77 12 1491 107 8 26 chr5 71489006 71489240 -131596292 - MER30 DNA MER1_type 0 230 1 393 322 40 23 chr5 71489510 71489684 -131595848 - MIR SINE MIR -35 227 51 438 300 89 66 chr5 71489768 71490115 -131595417 - L2 LINE L2 -568 2746 2392 760 252 96 24 chr5 71490230 71490480 -131595052 - MLT1I LTR MaLR -2 407 140 25 0 0 0 chr5 71490704 71490729 -131594803 + AT_rich Low_complexity Low_complexity 1 25 0 280 210 81 0 chr5 71490935 71490997 -131594535 - MLT1K LTR MaLR -8 580 514 537 306 68 25 chr5 71491343 71491794 -131593738 + MLT1J LTR MaLR 1 511 0 714 118 8 25 chr5 71493765 71493884 -131591648 + L1PA14 LINE L1 6042 6158 -3 2616 99 3 6 chr5 71493891 71494255 -131591277 + THE1B LTR MaLR 1 363 -1 180 0 0 0 chr5 71494900 71494920 -131590612 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2067 204 42 21 chr5 71495068 71495587 -131589945 + L1M4 LINE L1 4777 5306 -840 435 49 33 0 chr5 71495591 71495652 -131589880 - AluSc SINE Alu -11 298 236 580 258 79 31 chr5 71496349 71496714 -131588818 + L1MC4 LINE L1 6957 7340 -702 1478 214 21 0 chr5 71496715 71497000 -131588532 + AluJo SINE Alu 1 291 -21 288 187 0 47 chr5 71497002 71497109 -131588423 + G-rich Low_complexity Low_complexity 5 106 0 354 235 38 60 chr5 71497242 71497425 -131588107 + L1MC5 LINE L1 7317 7495 -466 2090 175 6 17 chr5 71497427 71497787 -131587745 + MLT1A1 LTR MaLR 10 365 0 302 256 112 25 chr5 71497793 71498035 -131587497 + L1MC5 LINE L1 7509 7771 -190 302 295 18 9 chr5 71498320 71498432 -131587100 + LTR67 LTR ERVL 432 544 -13 256 146 0 42 chr5 71499055 71499103 -131586429 + MLT1G1 LTR MaLR 50 95 -447 416 295 132 38 chr5 71499307 71499626 -131585906 + MLT1G1 LTR MaLR 246 594 -1 520 245 200 5 chr5 71500346 71500546 -131584986 + MIR SINE MIR 3 241 -21 412 234 0 0 chr5 71500923 71501017 -131584515 - L1M4 LINE L1 -2458 3688 3595 2184 180 100 101 chr5 71501066 71502006 -131583526 - L1ME2 LINE L1 -10 6154 5215 2366 42 0 11 chr5 71502006 71502326 -131583206 - AluY SINE Alu 0 317 1 2184 180 100 101 chr5 71502326 71502339 -131583193 - L1ME2 LINE L1 -949 5215 5203 2780 7 0 3 chr5 71502339 71502648 -131582884 - AluY SINE Alu -3 308 1 2184 180 100 101 chr5 71502648 71502707 -131582825 - L1ME2 LINE L1 -961 5203 5142 208 344 21 0 chr5 71503799 71503892 -131581640 - L2 LINE L2 -212 3060 2966 24 0 0 0 chr5 71505053 71505077 -131580455 + AT_rich Low_complexity Low_complexity 1 24 0 2581 169 39 8 chr5 71505166 71505682 -131579850 - L1 LINE L1 -780 6068 5537 844 136 37 25 chr5 71505686 71505848 -131579684 - L1MEd LINE L1 -4723 2126 1963 2322 94 0 13 chr5 71505848 71506157 -131579375 - AluSg SINE Alu -5 305 1 976 175 12 0 chr5 71506162 71506322 -131579210 - AluSg/x SINE Alu -12 300 139 775 281 39 31 chr5 71506322 71506582 -131578950 - L1MEd LINE L1 -5855 983 722 198 355 0 0 chr5 71507097 71507159 -131578373 + L2 LINE L2 3009 3070 -243 386 283 80 66 chr5 71507559 71507771 -131577761 - MIR SINE MIR 0 262 48 3794 137 27 9 chr5 71508732 71509397 -131576135 + L1MA4A LINE L1 5621 6297 -6 261 0 0 0 chr5 71510165 71510194 -131575338 + (A)n Simple_repeat Simple_repeat 1 29 0 204 226 75 38 chr5 71510278 71510331 -131575201 - MIR SINE MIR -70 138 84 19411 106 10 30 chr5 71512097 71515096 -131570436 - L1P LINE L1 -3196 2950 11 2436 84 0 0 chr5 71515804 71516115 -131569417 + AluY SINE Alu 1 311 0 533 291 78 33 chr5 71516166 71516437 -131569095 + L1MEd LINE L1 551 833 -5286 345 286 78 26 chr5 71516497 71516766 -131568766 + L1MEd LINE L1 3070 3352 -2777 2699 259 108 30 chr5 71517012 71519026 -131566506 + L1MEd LINE L1 3722 5898 -255 1896 184 13 71 chr5 71519562 71520014 -131565518 + MLT2B1 LTR ERVL 1 426 -94 276 77 0 0 chr5 71520041 71520080 -131565452 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 71520248 71520276 -131565256 + AT_rich Low_complexity Low_complexity 1 28 0 1640 126 43 31 chr5 71520350 71520676 -131564856 + L1MA8 LINE L1 5958 6287 -4 24 0 0 0 chr5 71521293 71521317 -131564215 + AT_rich Low_complexity Low_complexity 1 24 0 3307 136 7 81 chr5 71521457 71522162 -131563370 - L1PA16 LINE L1 0 6166 5514 1559 104 0 14 chr5 71522163 71522374 -131563158 - AluSq SINE Alu -101 212 5 6169 253 109 13 chr5 71522380 71525293 -131560239 - L1PA13 LINE L1 -2293 4504 1225 321 312 35 50 chr5 71525353 71525494 -131560038 - L1PA13 LINE L1 -6175 612 474 762 322 4 13 chr5 71525509 71525736 -131559796 - L1PA13 LINE L1 -6561 226 2 310 258 80 52 chr5 71526252 71526405 -131559127 + MIR SINE MIR 36 201 -61 288 0 0 0 chr5 71527066 71527098 -131558434 + (CA)n Simple_repeat Simple_repeat 2 33 0 305 388 30 0 chr5 71527123 71527257 -131558275 + MIR SINE MIR 14 151 -111 577 323 52 32 chr5 71527464 71527774 -131557758 - MLT1K LTR MaLR -195 393 78 204 305 0 0 chr5 71527777 71527836 -131557696 + MIR SINE MIR 146 204 -58 1079 76 0 0 chr5 71529851 71529983 -131555549 + AluSq/x SINE Alu 1 132 -181 180 0 0 0 chr5 71530202 71530222 -131555310 + (CA)n Simple_repeat Simple_repeat 2 21 0 1296 298 113 43 chr5 71530225 71531103 -131554429 + L1MC4a LINE L1 5971 6909 -899 4219 169 25 41 chr5 71531116 71532025 -131553507 + L1MB7 LINE L1 5274 6168 -16 2959 214 84 42 chr5 71532080 71533044 -131552488 + L1MC4 LINE L1 7039 8042 0 29 94 0 0 chr5 71533044 71533129 -131552403 + AT_rich Low_complexity Low_complexity 1 85 0 371 309 108 11 chr5 71533375 71533704 -131551828 - L1ME3A LINE L1 -239 5931 5569 603 226 37 67 chr5 71533704 71533868 -131551664 - MIR SINE MIR -50 212 54 247 286 0 13 chr5 71533888 71533965 -131551567 - L1ME LINE L1 -553 5617 5542 195 129 0 0 chr5 71535011 71535042 -131550490 + (TA)n Simple_repeat Simple_repeat 1 31 0 245 258 30 0 chr5 71535151 71535217 -131550315 - MIR SINE MIR -11 251 184 1708 154 24 10 chr5 71535228 71535520 -131550012 + AluJo SINE Alu 1 296 -16 454 283 25 0 chr5 71535670 71535790 -131549742 + L2 LINE L2 3148 3270 -2 29 28 0 0 chr5 71537105 71537141 -131548391 + AT_rich Low_complexity Low_complexity 1 36 0 242 193 8 109 chr5 71537470 71537481 -131548051 + Charlie7 DNA MER1_type 2451 2462 -150 2074 144 33 3 chr5 71537481 71537815 -131547717 - MER2 DNA MER2_type 0 344 1 242 193 8 109 chr5 71537815 71537922 -131547610 + Charlie7 DNA MER1_type 2462 2557 -55 1558 188 40 19 chr5 71537922 71538295 -131547237 + L1MB7 LINE L1 5753 6133 -51 2191 214 140 39 chr5 71538318 71539202 -131546330 + L1MD3 LINE L1 5220 5403 -743 760 219 96 0 chr5 71539592 71539843 -131545689 - MER33 DNA MER1_type 0 324 50 408 135 433 0 chr5 71539852 71539956 -131545576 - MER5B DNA MER1_type -29 149 1 296 389 120 16 chr5 71540044 71540412 -131545120 - L2 LINE L2 -340 2974 2569 336 189 14 0 chr5 71541404 71541478 -131544054 + MER116 DNA Mariner 3 77 -3 544 259 31 19 chr5 71541495 71541657 -131543875 + MER112 DNA MER1_type 96 259 -1 227 250 204 23 chr5 71544097 71544185 -131541347 + MIR SINE MIR 39 142 -66 2292 259 294 21 chr5 71544454 71545901 -131539631 - L2 LINE L2 -40 3273 1415 500 224 13 72 chr5 71545957 71546109 -131539423 + MLT1L LTR MaLR 252 394 -221 492 248 34 0 chr5 71546143 71546260 -131539272 + L2 LINE L2 3192 3312 -1 1706 155 9 50 chr5 71547345 71547667 -131537865 - AluJo SINE Alu -1 311 3 28 0 0 0 chr5 71547871 71547899 -131537633 + AT_rich Low_complexity Low_complexity 1 28 0 341 191 103 0 chr5 71547899 71547967 -131537565 - MIR SINE MIR -108 154 80 23 0 0 0 chr5 71548346 71548369 -131537163 + AT_rich Low_complexity Low_complexity 1 23 0 1683 207 83 58 chr5 71548391 71548720 -131536812 + L1MC4 LINE L1 6478 6797 -1091 1832 102 12 0 chr5 71548720 71548974 -131536558 + AluSx SINE Alu 54 310 -2 1683 207 83 58 chr5 71548974 71549208 -131536324 + L1MC4 LINE L1 6797 7169 -719 5818 95 10 1 chr5 71549236 71550054 -131535478 + L1P3 LINE L1 1 825 -5636 315 211 37 68 chr5 71550154 71550235 -131535297 + L1M4 LINE L1 5228 5310 -836 1592 122 12 12 chr5 71550235 71550489 -131535043 - AluSc SINE Alu -11 298 45 315 211 37 68 chr5 71550489 71550585 -131534947 + L1M4 LINE L1 5310 5402 -744 288 313 60 60 chr5 71551134 71551351 -131534181 - L2 LINE L2 -463 2851 2635 257 314 56 53 chr5 71552164 71552358 -131533174 + MIR SINE MIR 32 223 -39 29 78 0 0 chr5 71553023 71553087 -131532445 + AT_rich Low_complexity Low_complexity 1 64 0 497 342 32 7 chr5 71553644 71553799 -131531733 + MER91A DNA MER1_type 3 161 -35 2289 103 0 0 chr5 71553874 71554184 -131531348 - AluY SINE Alu -1 310 1 208 327 0 47 chr5 71554415 71554522 -131531010 + MIR3 SINE MIR 96 197 -11 2107 210 23 26 chr5 71554668 71554878 -131530654 - L1M4 LINE L1 -2976 3170 2961 1118 236 57 54 chr5 71554878 71555229 -131530303 + MLT2C1 LTR ERVL 4 358 -39 446 75 15 0 chr5 71555229 71555296 -131530236 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1118 236 57 54 chr5 71555296 71555333 -131530199 + MLT2C1 LTR ERVL 358 393 -4 2107 210 23 26 chr5 71555333 71555651 -131529881 - L1M4 LINE L1 -3185 2961 2644 502 313 39 16 chr5 71556637 71556819 -131528713 + MIR SINE MIR 20 205 -57 1382 209 42 12 chr5 71556897 71557156 -131528376 + Tigger7 DNA MER2_type 1 267 -466 478 147 0 78 chr5 71557155 71557257 -131528275 + Tigger7 DNA MER2_type 2391 2484 -3 * 1271 180 4 16 chr5 71557518 71557763 -131527769 - MLT1A1 LTR MaLR 0 365 124 251 217 0 0 chr5 71557737 71557783 -131527749 + MLT1A1 LTR MaLR 116 161 -204 * 192 314 43 29 chr5 71557802 71557872 -131527660 - MIR3 SINE MIR -51 157 87 2635 65 0 0 chr5 71558796 71559137 -131526395 - L1PA7 LINE L1 0 6154 5814 2035 70 18 0 chr5 71559179 71559451 -131526081 - L1PA5 LINE L1 -1 6153 5877 3860 70 13 0 chr5 71559451 71559982 -131525550 + L1P LINE L1 4862 5399 -747 923 26 9 0 chr5 71559969 71560083 -131525449 - L1PA6 LINE L1 -321 5833 5719 * 3487 195 63 15 chr5 71560546 71560629 -131524903 - Charlie1a DNA MER1_type -1306 1455 1377 438 53 0 0 chr5 71560629 71560686 -131524846 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3487 195 63 15 chr5 71560686 71560745 -131524787 - Charlie1a DNA MER1_type -1384 1377 1322 848 153 0 7 chr5 71560745 71560889 -131524643 + L1PA15 LINE L1 6021 6163 -2 3487 195 63 15 chr5 71560889 71561598 -131523934 - Charlie1a DNA MER1_type -1439 1322 562 1553 217 143 11 chr5 71561599 71562069 -131523463 - Charlie1a DNA MER1_type -922 533 2 623 218 114 33 chr5 71562072 71562283 -131523249 + MIR SINE MIR 11 238 -24 24 0 0 0 chr5 71564209 71564233 -131521299 + AT_rich Low_complexity Low_complexity 1 24 0 180 320 20 0 chr5 71565244 71565294 -131520238 - L3b LINE CR1 -71 1512 1462 216 0 0 0 chr5 71565694 71565718 -131519814 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 294 184 0 0 chr5 71568250 71568299 -131517233 + L2 LINE L2 3224 3272 0 186 343 29 0 chr5 71569229 71569334 -131516198 - L2 LINE L2 -1625 1689 1582 * 303 329 6 48 chr5 71569324 71569491 -131516041 + MER5A DNA MER1_type 8 167 -22 22 0 0 0 chr5 71570499 71570521 -131515011 + AT_rich Low_complexity Low_complexity 1 22 0 278 305 0 29 chr5 71570992 71571097 -131514435 + CT-rich Low_complexity Low_complexity 4 105 0 360 0 0 0 chr5 71571105 71571145 -131514387 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 53 0 0 chr5 71572381 71572419 -131513113 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 71572447 71572477 -131513055 + AT_rich Low_complexity Low_complexity 1 30 0 1697 125 4 4 chr5 71572762 71573029 -131512503 - AluSx SINE Alu 0 312 46 1219 219 40 0 chr5 71573423 71573697 -131511835 + L1MD3 LINE L1 6729 7013 -982 194 32 63 63 chr5 71573701 71573764 -131511768 + (TATAA)n Simple_repeat Simple_repeat 3 65 0 273 208 58 13 chr5 71573766 71573920 -131511612 + (TA)n Simple_repeat Simple_repeat 1 161 0 31 0 0 0 chr5 71573951 71573982 -131511550 + AT_rich Low_complexity Low_complexity 1 31 0 2972 207 78 19 chr5 71573995 71574815 -131510717 + L1MC4a LINE L1 6940 7807 -1 360 0 0 0 chr5 71575050 71575094 -131510438 + AluY SINE Alu 1 44 -258 315 100 0 0 chr5 71576196 71576246 -131509286 + L1MB7 LINE L1 6118 6167 -17 396 0 0 0 chr5 71577178 71577222 -131508310 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2020 118 0 0 chr5 71577222 71577501 -131508031 - AluSx SINE Alu -33 279 1 272 232 78 42 chr5 71577795 71577937 -131507595 - L1ME4a LINE L1 -11 6110 5964 22 70 0 0 chr5 71578261 71578304 -131507228 + AT_rich Low_complexity Low_complexity 1 43 0 357 280 67 53 chr5 71579311 71579336 -131506196 - MIR3 SINE MIR -41 167 144 2208 114 0 0 chr5 71579336 71579634 -131505898 - AluSg SINE Alu -12 298 1 357 280 67 53 chr5 71579634 71579758 -131505774 - MIR3 SINE MIR -64 144 16 298 152 0 0 chr5 71580773 71580819 -131504713 - L1ME4a LINE L1 -589 5755 5710 369 287 137 15 chr5 71580876 71581284 -131504248 + L1MEd LINE L1 667 1124 -5081 281 311 19 0 chr5 71581313 71581419 -131504113 + L1MEd LINE L1 1193 1300 -4905 356 311 25 6 chr5 71581642 71581803 -131503729 + L1MEd LINE L1 1654 1817 -4579 1485 175 53 4 chr5 71582336 71582599 -131502933 + AluSx SINE Alu 1 276 -36 4206 63 2 26 chr5 71582599 71583166 -131502366 + L1PA6 LINE L1 5600 6152 -2 672 311 80 0 chr5 71583233 71583609 -131501923 + L1MEd LINE L1 2485 2890 -3325 292 202 126 71 chr5 71583634 71583817 -131501715 + L1MEd LINE L1 3044 3236 -2979 681 311 98 25 chr5 71584114 71584471 -131501061 - MLT1J LTR MaLR -56 455 73 266 333 0 12 chr5 71584743 71584824 -131500708 + L2 LINE L2 3234 3313 0 1414 199 45 19 chr5 71585113 71586138 -131499394 - L1ME1 LINE L1 -44 6122 4974 6952 132 35 32 chr5 71586139 71586294 -131499238 - Tigger3b DNA MER2_type -1797 1231 1078 1567 104 45 0 chr5 71586294 71586514 -131499018 - MER30 DNA MER1_type 0 230 1 6952 132 35 32 chr5 71586514 71586656 -131498876 - Tigger3b DNA MER2_type -1950 1078 938 1831 67 13 0 chr5 71586656 71586880 -131498652 + AluY SINE Alu 71 297 -14 6952 132 35 32 chr5 71586880 71587808 -131497724 - Tigger3b DNA MER2_type -2090 938 1 2258 214 40 27 chr5 71587808 71588410 -131497122 - L1ME1 LINE L1 -1172 4974 4365 5487 53 1 3 chr5 71588419 71589112 -131496420 + L1PA8 LINE L1 5480 6171 -1 447 207 132 8 chr5 71589118 71589239 -131496293 - L1MC2 LINE L1 -5 6339 6204 * 1058 190 11 14 chr5 71589209 71589454 -131496078 - L1MB5 LINE L1 -277 5897 5686 401 285 36 26 chr5 71589455 71589648 -131495884 - MLT1F1-int LTR MaLR -1175 196 2 1558 208 204 35 chr5 71589650 71590135 -131495397 - MLT1F1 LTR MaLR 0 567 1 198 205 0 26 chr5 71590199 71590238 -131495294 + MIR3 SINE MIR 147 184 -24 2387 95 0 0 chr5 71590325 71590631 -131494901 + AluSx SINE Alu 1 306 -6 271 206 228 33 chr5 71590823 71590915 -131494617 + Charlie7 DNA MER1_type 1 110 -2502 241 235 69 20 chr5 71590962 71591064 -131494468 + Charlie7 DNA MER1_type 2506 2612 0 10905 63 14 0 chr5 71591096 71593276 -131492256 - L1PA6 LINE L1 -11 6143 3935 12420 94 3 6 chr5 71593276 71595045 -131490487 - L1PA6 LINE L1 -2979 3167 1405 456 216 10 10 chr5 71595181 71595278 -131490254 - HERV16 LTR ERVL -4015 981 885 1087 192 43 34 chr5 71595279 71595513 -131490019 + MLT2D LTR ERVL 179 414 0 487 337 10 46 chr5 71595517 71595713 -131489819 - HERV16 LTR ERVL -3459 1537 1349 1246 211 52 33 chr5 71595783 71596148 -131489384 - MSTB1 LTR MaLR 0 432 61 290 269 244 13 chr5 71597200 71597356 -131488176 - L2 LINE L2 0 3313 3122 586 270 111 31 chr5 71597646 71597872 -131487660 + MIR SINE MIR 15 258 -4 733 181 16 0 chr5 71598178 71598305 -131487227 - FLAM_A SINE Alu -4 129 1 496 352 31 0 chr5 71598585 71598747 -131486785 + MIR3 SINE MIR 28 194 -14 27 0 0 0 chr5 71598838 71598865 -131486667 + AT_rich Low_complexity Low_complexity 1 27 0 230 279 0 0 chr5 71599243 71599286 -131486246 + L2 LINE L2 3214 3256 -16 858 283 119 84 chr5 71599573 71600356 -131485176 + L1ME1 LINE L1 4 832 -5287 1911 134 7 23 chr5 71600356 71600655 -131484877 - AluSx SINE Alu -18 294 1 858 283 119 84 chr5 71600655 71600875 -131484657 + L1ME1 LINE L1 832 1043 -5076 837 98 0 0 chr5 71602392 71602504 -131483028 + AluSp/q SINE Alu 193 304 -9 635 268 153 13 chr5 71603820 71604048 -131481484 - MIR SINE MIR -1 261 2 324 222 65 9 chr5 71604171 71604279 -131481253 + L1MC5 LINE L1 7813 7926 -35 3072 232 79 9 chr5 71604709 71606261 -131479271 + L1ME1 LINE L1 4512 6317 0 199 196 176 0 chr5 71606951 71607002 -131478530 - L2 LINE L2 -1 3312 3253 222 307 62 105 chr5 71607067 71607468 -131478064 - L2 LINE L2 -81 3191 2808 2651 30 0 0 chr5 71607605 71607904 -131477628 - AluY SINE Alu -12 299 1 324 0 0 0 chr5 71608351 71608387 -131477145 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr5 71609306 71609335 -131476197 + AT_rich Low_complexity Low_complexity 1 29 0 180 184 0 0 chr5 71609866 71609915 -131475617 + (TA)n Simple_repeat Simple_repeat 2 50 0 538 362 109 43 chr5 71610165 71610775 -131474757 - L2 LINE L2 -12 3260 2618 1777 161 0 17 chr5 71611337 71611635 -131473897 + AluJo SINE Alu 1 293 -19 2665 90 3 3 chr5 71611661 71612016 -131473516 - THE1A LTR MaLR 0 355 1 348 259 36 0 chr5 71612100 71612212 -131473320 + L1ME4a LINE L1 5938 6053 -68 2196 121 0 9 chr5 71613167 71613482 -131472050 + AluSx SINE Alu 1 312 0 320 343 106 0 chr5 71613516 71613799 -131471733 - L1ME LINE L1 -349 5772 5460 1420 191 31 31 chr5 71613901 71614219 -131471313 - AluJo SINE Alu 0 318 1 276 250 102 57 chr5 71614812 71614900 -131470632 - L2 LINE L2 -12 3260 3169 195 222 0 0 chr5 71617348 71617393 -131468139 + A-rich Low_complexity Low_complexity 1 45 0 211 260 20 0 chr5 71618030 71618080 -131467452 + CT-rich Low_complexity Low_complexity 1 51 0 2181 127 0 0 chr5 71618192 71618491 -131467041 + AluSx SINE Alu 1 299 -13 269 228 65 11 chr5 71618491 71618583 -131466949 - L1ME4a LINE L1 -28 6888 6792 351 244 145 51 chr5 71618646 71618880 -131466652 - L1ME4a LINE L1 -124 6792 6537 350 285 35 21 chr5 71618889 71619033 -131466499 - L1ME4a LINE L1 -435 6481 6336 22 0 0 0 chr5 71619141 71619163 -131466369 + AT_rich Low_complexity Low_complexity 1 22 0 1642 167 15 0 chr5 71619711 71619974 -131465558 - AluJo SINE Alu -17 295 29 1123 160 309 34 chr5 71620133 71620171 -131465361 - Charlie1b DNA MER1_type -2238 523 497 2104 158 0 12 chr5 71620171 71620512 -131465020 + MER1B DNA MER1_type 1 337 0 1123 160 309 34 chr5 71620512 71620878 -131464654 - Charlie1b DNA MER1_type -2264 497 1 180 0 0 0 chr5 71621213 71621233 -131464299 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2020 107 4 7 chr5 71621233 71621514 -131464018 - AluSq SINE Alu -33 280 1 433 185 194 19 chr5 71621574 71621682 -131463850 - MIR SINE MIR -42 220 94 4514 228 64 13 chr5 71621932 71623274 -131462258 - L1ME4a LINE L1 -764 6177 4790 1590 125 57 25 chr5 71623277 71623556 -131461976 + THE1C LTR MaLR 4 291 -84 975 178 69 0 chr5 71623562 71623736 -131461796 - L1MC/D LINE L1 -672 5672 5487 * 1536 232 0 0 chr5 71623731 71624046 -131461486 - L1ME4a LINE L1 -2311 4630 4316 1225 246 17 17 chr5 71624070 71624392 -131461140 - L1MCc LINE L1 -5742 680 10 237 83 0 0 chr5 71624421 71624457 -131461075 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 484 31 0 0 chr5 71624460 71624524 -131461008 - L1PA3 LINE L1 -3 6152 6089 2549 236 58 32 chr5 71624526 71625458 -131460074 - L1MDa LINE L1 -4078 2328 1373 1293 244 64 36 chr5 71625462 71625933 -131459599 - L1MDa LINE L1 -5151 1258 775 2120 126 3 3 chr5 71625984 71626285 -131459247 - AluSp SINE Alu -12 301 1 2777 16 0 3 chr5 71627633 71627944 -131457588 - AluYa5 SINE Alu -1 310 1 1925 149 13 29 chr5 71628822 71629138 -131456394 + AluJo SINE Alu 1 311 -1 290 325 61 9 chr5 71629586 71629700 -131455832 - MIR SINE MIR -73 189 70 2328 84 0 3 chr5 71629913 71630211 -131455321 - AluY SINE Alu -14 297 1 753 239 117 5 chr5 71630368 71630573 -131454959 + MIR SINE MIR 28 255 -7 228 303 9 0 chr5 71631630 71631739 -131453793 - L1ME LINE L1 -240 5881 5772 722 199 35 10 chr5 71631865 71632066 -131453466 - L1ME2 LINE L1 0 6164 5959 259 269 21 21 chr5 71632079 71632172 -131453360 - L1ME LINE L1 -527 5594 5502 320 65 0 0 chr5 71632387 71632433 -131453099 - AluSx SINE Alu -1 301 256 1593 113 0 0 chr5 71632439 71632651 -131452881 - AluSx SINE Alu -100 212 1 314 324 47 39 chr5 71632663 71632919 -131452613 - L1ME LINE L1 -907 5239 4982 245 237 13 0 chr5 71633058 71633134 -131452398 - L1ME LINE L1 -1329 4817 4741 333 278 30 37 chr5 71633945 71634072 -131451460 - MIR SINE MIR -52 156 27 952 247 40 0 chr5 71634561 71634808 -131450724 + MIR SINE MIR 6 262 0 272 274 4 37 chr5 71636129 71636286 -131449246 + T-rich Low_complexity Low_complexity 1 151 0 13802 200 38 15 chr5 71636618 71641214 -131444318 - L1MA4 LINE L1 -5 6997 2508 2115 142 0 10 chr5 71641214 71641524 -131444008 - AluSx SINE Alu -5 307 1 13802 200 38 15 chr5 71641524 71642252 -131443280 - L1MA4 LINE L1 -4494 2508 1798 267 31 0 0 chr5 71642252 71642284 -131443248 + (CA)n Simple_repeat Simple_repeat 2 33 0 13802 200 38 15 chr5 71642284 71643027 -131442505 - L1MA4 LINE L1 -5204 1798 818 21 71 0 0 chr5 71643960 71644002 -131441530 + AT_rich Low_complexity Low_complexity 1 42 0 2964 170 39 43 chr5 71644064 71644166 -131441366 + L1MC3 LINE L1 7113 7214 -571 892 92 23 0 chr5 71644166 71644296 -131441236 + L1PA14 LINE L1 6020 6152 -9 575 14 0 14 chr5 71644303 71644376 -131441156 + (GAAA)n Simple_repeat Simple_repeat 2 73 0 2964 170 39 43 chr5 71644376 71644743 -131440789 + L1MC3 LINE L1 7220 7589 -196 1554 196 12 52 chr5 71644743 71644962 -131440570 - MLT1B LTR MaLR -2 388 191 2474 59 0 3 chr5 71644962 71645266 -131440266 - AluY SINE Alu -8 303 1 1554 196 12 52 chr5 71645266 71645450 -131440082 - MLT1B LTR MaLR -199 191 1 2964 170 39 43 chr5 71645450 71645647 -131439885 + L1MC3 LINE L1 7589 7785 0 342 315 40 35 chr5 71645776 71645976 -131439556 + L1M4 LINE L1 4903 5103 -1043 2060 164 22 54 chr5 71646285 71646731 -131438801 - MSTB1 LTR MaLR 0 432 1 1462 166 49 100 chr5 71646806 71647197 -131438335 + MLT1A2 LTR MaLR 4 374 0 253 285 139 46 chr5 71647278 71647429 -131438103 - MIR SINE MIR -55 153 24 218 318 28 28 chr5 71647484 71647591 -131437941 - L2 LINE L2 -208 3064 2958 220 266 7 136 chr5 71648310 71648416 -131437116 - L2 LINE L2 0 3313 3231 992 167 37 0 chr5 71648416 71648578 -131436954 + FAM SINE Alu 1 168 -7 220 266 7 136 chr5 71648578 71648625 -131436907 - L2 LINE L2 -82 3231 3180 263 306 92 52 chr5 71648785 71649014 -131436518 - L2 LINE L2 -353 2961 2724 528 286 77 38 chr5 71649318 71649605 -131435927 + MARNA DNA Mariner 95 392 -194 206 326 144 23 chr5 71649833 71649965 -131435567 + L2 LINE L2 3123 3270 -2 231 282 183 23 chr5 71650002 71650133 -131435399 + L3b LINE CR1 1176 1327 -256 538 305 13 19 chr5 71650189 71650343 -131435189 + MER5B DNA MER1_type 9 161 -17 198 314 0 0 chr5 71650761 71650812 -131434720 - L2 LINE L2 -47 3225 3175 21 57 0 0 chr5 71651176 71651211 -131434321 + AT_rich Low_complexity Low_complexity 1 35 0 328 86 49 55 chr5 71651536 71651699 -131433833 + (TA)n Simple_repeat Simple_repeat 1 162 0 662 200 0 0 chr5 71653695 71653805 -131431727 + FLAM_A SINE Alu 6 115 -27 189 0 0 0 chr5 71653808 71653829 -131431703 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2338 79 0 3 chr5 71654376 71654667 -131430865 + AluSg SINE Alu 2 291 -19 35 24 0 0 chr5 71656056 71656098 -131429434 + AT_rich Low_complexity Low_complexity 1 42 0 2434 99 3 0 chr5 71656423 71656735 -131428797 - AluSp SINE Alu 0 313 1 371 139 15 197 chr5 71656914 71657051 -131428481 + MER5A DNA MER1_type 1 112 -77 190 209 70 0 chr5 71657052 71657095 -131428437 - MER5A DNA MER1_type -34 155 110 257 281 44 26 chr5 71657095 71657209 -131428323 + L1ME3A LINE L1 5555 5670 -500 286 273 0 0 chr5 71657245 71657333 -131428199 + L1ME3A LINE L1 5750 5837 -333 365 253 0 0 chr5 71659799 71659878 -131425654 + MER63 DNA MER1_type 672 750 -312 23 54 0 0 chr5 71660293 71660330 -131425202 + AT_rich Low_complexity Low_complexity 1 37 0 2167 114 0 10 chr5 71660728 71660863 -131424669 + AluSx SINE Alu 1 136 -176 2349 99 3 3 chr5 71660863 71661166 -131424366 + AluSp SINE Alu 1 303 -10 2167 114 0 10 chr5 71661166 71661337 -131424195 + AluSx SINE Alu 136 304 -8 23 0 0 0 chr5 71661337 71661360 -131424172 + AT_rich Low_complexity Low_complexity 1 23 0 2549 60 0 0 chr5 71661360 71661661 -131423871 + AluY SINE Alu 1 301 -10 1800 231 40 115 chr5 71662039 71663100 -131422432 + L2 LINE L2 2332 3311 -2 211 291 27 55 chr5 71663403 71663513 -131422019 + MIR SINE MIR 92 198 -64 786 270 60 21 chr5 71663563 71663796 -131421736 - MIR SINE MIR -8 254 13 229 219 43 195 chr5 71665596 71665760 -131419772 - MER5A DNA MER1_type -16 173 35 197 279 79 100 chr5 71665637 71665777 -131419755 + MER5A DNA MER1_type 50 186 -3 * 447 297 0 0 chr5 71667020 71667121 -131418411 - MER91B DNA MER1_type 0 190 90 325 221 25 98 chr5 71667137 71667259 -131418273 - MER91B DNA MER1_type -61 129 17 5974 68 1 30 chr5 71667818 71668621 -131416911 + LTR17 LTR ERV1 1 780 0 225 313 0 0 chr5 71670364 71670428 -131415104 + MIR SINE MIR 52 115 -147 322 243 250 14 chr5 71671027 71671171 -131414361 - MER5B DNA MER1_type 0 178 1 380 191 153 15 chr5 71673360 71673491 -131412041 - L1ME4a LINE L1 -2 6119 5971 1724 152 10 17 chr5 71674358 71674648 -131410884 - AluJb SINE Alu -24 288 1 579 220 34 17 chr5 71676236 71676413 -131409119 + L1ME3A LINE L1 5989 6168 -2 589 206 0 0 chr5 71676622 71676748 -131408784 + L1MD3 LINE L1 7834 7959 -36 2353 92 0 7 chr5 71677170 71677473 -131408059 + AluSq SINE Alu 1 301 -12 276 281 175 0 chr5 71677540 71677654 -131407878 - MIR SINE MIR -10 252 119 249 304 11 33 chr5 71679895 71679987 -131405545 - MER5A DNA MER1_type -99 90 1 314 225 85 101 chr5 71679987 71680116 -131405416 - L1MC4 LINE L1 -295 7747 7621 777 281 83 0 chr5 71681260 71681488 -131404044 - MIR SINE MIR -2 260 14 1212 126 0 0 chr5 71681587 71681754 -131403778 - AluSg/x SINE Alu -9 303 137 23 0 0 0 chr5 71681765 71681788 -131403744 + AT_rich Low_complexity Low_complexity 1 23 0 324 320 207 23 chr5 71682095 71682845 -131402687 + L2 LINE L2 1299 2186 -1128 2090 297 74 56 chr5 71682845 71682958 -131402574 + L2 LINE L2 1716 1826 -1487 2241 100 0 0 chr5 71682958 71683248 -131402284 - AluSg SINE Alu -20 290 1 2090 297 74 56 chr5 71683248 71683411 -131402121 + L2 LINE L2 1826 1985 -1328 2186 112 3 3 chr5 71683411 71683707 -131401825 + AluSg SINE Alu 1 296 -14 2090 297 74 56 chr5 71683707 71685015 -131400517 + L2 LINE L2 1985 3313 0 1191 281 87 40 chr5 71685317 71685848 -131399684 - LTR67 LTR ERVL 0 557 2 306 330 53 86 chr5 71686140 71686519 -131399013 + L2 LINE L2 2830 3193 -79 2161 121 3 3 chr5 71686519 71686825 -131398707 - AluSx SINE Alu -6 306 1 306 330 53 86 chr5 71686825 71686899 -131398633 + L2 LINE L2 3193 3268 -4 432 313 11 103 chr5 71686931 71687193 -131398339 - MIR SINE MIR -12 250 13 1720 171 149 26 chr5 71687447 71687605 -131397927 - MLT1C LTR MaLR 0 467 330 2250 186 3 6 chr5 71687605 71687971 -131397561 - MLT1A1 LTR MaLR 0 365 1 1720 171 149 26 chr5 71687971 71688227 -131397305 - MLT1C LTR MaLR -137 330 2 245 250 0 0 chr5 71688232 71688284 -131397248 + L2 LINE L2 3211 3262 -10 265 250 59 0 chr5 71688948 71689016 -131396516 - L1ME3A LINE L1 -94 6076 6005 1614 278 73 13 chr5 71689134 71690119 -131395413 - L1ME3A LINE L1 -211 5951 4906 14697 172 36 52 chr5 71690165 71690665 -131394867 - L1MA4A LINE L1 -25 6980 6473 268 89 0 0 chr5 71690665 71690710 -131394822 - LTR66 LTR ERVL -172 438 394 14697 172 36 52 chr5 71690710 71691730 -131393802 - L1MA4A LINE L1 -532 6473 5438 1623 148 81 47 chr5 71691730 71692027 -131393505 - AluJo SINE Alu -3 309 3 14697 172 36 52 chr5 71692027 71692704 -131392828 - L1MA4A LINE L1 -1567 5438 4751 2060 125 7 7 chr5 71692704 71692999 -131392533 - AluSg SINE Alu -15 295 1 14697 172 36 52 chr5 71692999 71694917 -131390615 - L1MA4A LINE L1 -2254 4751 2878 2470 94 18 0 chr5 71694930 71695258 -131390274 - L1PA13 LINE L1 -10 6153 5820 903 183 0 0 chr5 71695291 71695482 -131390050 - L1MA4A LINE L1 -4026 2823 2633 747 312 11 0 chr5 71695481 71695667 -131389865 + L1M2 LINE L1 1196 1383 -5466 * 2776 154 14 2 chr5 71695667 71696090 -131389442 + MSTA LTR MaLR 1 428 0 4124 151 36 47 chr5 71696100 71696568 -131388964 + MSTA-int LTR MaLR 12 470 -1181 2004 137 10 10 chr5 71696568 71696860 -131388672 - AluSq SINE Alu -21 292 1 4124 151 36 47 chr5 71696860 71697158 -131388374 + MSTA-int LTR MaLR 470 770 -881 792 133 161 0 chr5 71697172 71697315 -131388217 + MSTA LTR MaLR 263 428 0 188 216 39 0 chr5 71697315 71697366 -131388166 - L2 LINE L2 -224 3048 2996 801 260 60 17 chr5 71697643 71697878 -131387654 + MIR SINE MIR 18 262 0 197 242 0 61 chr5 71697983 71698049 -131387483 - L2 LINE L2 -968 2346 2285 228 322 130 31 chr5 71698183 71698444 -131387088 - L2 LINE L2 -181 3091 2805 436 240 111 58 chr5 71699329 71699500 -131386032 + MIR SINE MIR 35 214 -48 21 36 0 0 chr5 71699859 71699887 -131385645 + AT_rich Low_complexity Low_complexity 1 28 0 2338 203 9 44 chr5 71700630 71700960 -131384572 - L1MD3 LINE L1 -10 7985 7680 2464 93 0 0 chr5 71700960 71701262 -131384270 - AluSx SINE Alu -10 302 1 2338 203 9 44 chr5 71701262 71701482 -131384050 - L1MD3 LINE L1 -315 7680 7454 1563 264 29 55 chr5 71701498 71701730 -131383802 + L2 LINE L2 2134 2370 -944 2205 115 3 6 chr5 71701730 71702043 -131383489 + AluSx SINE Alu 1 312 0 1563 264 29 55 chr5 71702043 71702356 -131383176 + L2 LINE L2 2370 2665 -649 279 295 39 0 chr5 71702401 71702479 -131383053 + L2 LINE L2 2875 2955 -358 * 545 312 195 22 chr5 71702453 71702992 -131382540 + L2 LINE L2 2346 2977 -337 21 0 0 0 chr5 71703276 71703297 -131382235 + AT_rich Low_complexity Low_complexity 1 21 0 273 246 0 0 chr5 71703583 71703640 -131381892 + L2 LINE L2 3257 3313 0 329 340 37 4 chr5 71705539 71705694 -131379838 + L1ME LINE L1 5607 5715 -406 228 67 0 0 chr5 71706356 71706386 -131379146 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 274 321 124 47 chr5 71707776 71707855 -131377677 - MIR SINE MIR -14 248 177 2218 104 0 0 chr5 71707855 71708164 -131377368 - AluSx SINE Alu 0 311 3 274 321 124 47 chr5 71708164 71708275 -131377257 - MIR SINE MIR -85 177 41 370 294 122 11 chr5 71709260 71709440 -131376092 + MIR SINE MIR 21 220 -42 456 347 37 21 chr5 71709931 71710173 -131375359 - MIR SINE MIR 0 262 17 260 257 188 0 chr5 71711094 71711195 -131374337 - MIR SINE MIR -12 250 131 547 216 50 65 chr5 71711284 71711483 -131374049 + MIR3 SINE MIR 4 199 -9 924 218 176 76 chr5 71711791 71711870 -131373662 - MLT1H1 LTR MaLR 0 555 485 2167 122 0 0 chr5 71711870 71712166 -131373366 + AluSx SINE Alu 1 296 -16 924 218 176 76 chr5 71712166 71712558 -131372974 - MLT1H1 LTR MaLR -70 485 37 435 87 0 0 chr5 71712659 71712728 -131372804 + (TC)n Simple_repeat Simple_repeat 2 70 0 216 67 0 0 chr5 71712730 71712760 -131372772 + (CA)n Simple_repeat Simple_repeat 1 30 0 547 208 271 0 chr5 71714083 71714227 -131371305 - MER5A DNA MER1_type 0 189 7 195 42 0 0 chr5 71714251 71714275 -131371257 + (A)n Simple_repeat Simple_repeat 1 24 0 27 29 0 0 chr5 71714940 71714974 -131370558 + AT_rich Low_complexity Low_complexity 1 34 0 208 234 21 0 chr5 71715486 71715533 -131369999 + GA-rich Low_complexity Low_complexity 1 48 0 198 167 0 0 chr5 71716352 71716388 -131369144 + (CA)n Simple_repeat Simple_repeat 2 37 0 386 202 0 11 chr5 71717470 71717564 -131367968 + CT-rich Low_complexity Low_complexity 1 93 0 278 103 0 0 chr5 71718012 71718051 -131367481 - MADE1 DNA Mariner 0 80 42 1923 131 18 0 chr5 71718073 71718393 -131367139 - AluSx SINE Alu 0 328 4 769 206 0 8 chr5 71719239 71719370 -131366162 - FLAM_C SINE Alu -12 131 2 22 35 0 0 chr5 71720103 71720132 -131365400 + AT_rich Low_complexity Low_complexity 1 29 0 274 288 131 11 chr5 71720386 71720531 -131365001 + MIR SINE MIR 20 181 -69 297 362 112 0 chr5 71720959 71721075 -131364457 - L2 LINE L2 -2 3270 3142 641 241 142 6 chr5 71721088 71721250 -131364282 + MER5A DNA MER1_type 4 187 -2 2128 183 79 23 chr5 71721371 71721813 -131363719 - MLT1C LTR MaLR 0 467 1 2230 103 10 3 chr5 71721847 71722157 -131363375 + AluSq SINE Alu 1 312 -1 633 191 108 51 chr5 71723419 71723576 -131361956 - MER58C DNA MER1_type -13 202 37 2011 149 3 7 chr5 71725806 71726115 -131359417 - AluJo SINE Alu 0 312 5 255 342 0 0 chr5 71727018 71727097 -131358435 + MIR3 SINE MIR 124 202 -6 406 296 165 52 chr5 71727250 71727656 -131357876 - L2 LINE L2 -4 3268 2817 296 375 97 19 chr5 71728019 71728485 -131357047 - L2 LINE L2 -575 2739 2238 468 329 56 26 chr5 71728599 71728830 -131356702 + MLT1J LTR MaLR 274 511 0 2164 152 27 29 chr5 71728947 71729323 -131356209 + THE1C LTR MaLR 1 375 0 630 233 96 32 chr5 71729486 71729705 -131355827 + L1ME3A LINE L1 5917 6149 -21 25 0 0 0 chr5 71729718 71729743 -131355789 + AT_rich Low_complexity Low_complexity 1 25 0 9101 149 113 5 chr5 71730003 71732000 -131353532 + L1M1 LINE L1 12 2177 -5388 5117 102 57 5 chr5 71732000 71732754 -131352778 + L1MA3 LINE L1 5513 6305 0 22 0 0 0 chr5 71732754 71732776 -131352756 + AT_rich Low_complexity Low_complexity 1 22 0 327 335 55 51 chr5 71732917 71733174 -131352358 + HAL1b LINE L1 99 356 -992 2436 65 14 0 chr5 71733434 71733727 -131351805 + AluSp SINE Alu 1 297 -16 975 178 6 13 chr5 71734208 71734365 -131351167 + FAM SINE Alu 1 156 -19 627 169 76 0 chr5 71734625 71734743 -131350789 + MER3 DNA MER1_type 2 128 -81 523 127 28 177 chr5 71734731 71734912 -131350620 + MER3 DNA MER1_type 2471 2624 0 * 1879 215 69 23 chr5 71734928 71735490 -131350042 + L1ME4a LINE L1 5329 5916 -205 245 256 60 60 chr5 71735929 71736046 -131349486 - MIR SINE MIR -28 234 118 497 257 35 53 chr5 71736122 71736293 -131349239 + MIR SINE MIR 60 227 -35 2456 81 0 0 chr5 71737153 71737463 -131348069 + AluY SINE Alu 1 310 -1 3145 186 28 2 chr5 71737508 71738051 -131347481 - MER41D LTR ERV1 0 557 1 258 228 18 0 chr5 71738217 71738274 -131347258 - L2 LINE L2 -18 3254 3197 346 236 11 0 chr5 71739722 71739811 -131345721 + MER53 DNA DNA 100 189 0 28 61 0 0 chr5 71740427 71740476 -131345056 + GC_rich Low_complexity Low_complexity 1 49 0 252 352 74 49 chr5 71741499 71741783 -131343749 + L3 LINE CR1 1050 1340 -237 774 303 141 14 chr5 71742517 71742963 -131342569 + L2 LINE L2 2034 2536 -778 294 269 105 87 chr5 71743134 71743525 -131342007 + MLT1K LTR MaLR 189 586 -2 380 353 96 9 chr5 71743720 71743938 -131341594 + L2 LINE L2 2842 3078 -194 2264 141 30 0 chr5 71744146 71744479 -131341053 + MER2 DNA MER2_type 1 343 -1 2117 126 7 0 chr5 71744561 71744855 -131340677 - AluSx SINE Alu -16 296 1 232 333 71 44 chr5 71745117 71745300 -131340232 + L2 LINE L2 2808 2995 -277 215 315 22 22 chr5 71745474 71745563 -131339969 - MIR SINE MIR -127 135 47 1997 73 4 0 chr5 71745573 71745818 -131339714 - AluSp SINE Alu -67 246 1 4979 161 47 9 chr5 71746201 71747393 -131338139 - L1MB5 LINE L1 -36 6374 5138 1926 211 126 19 chr5 71747388 71747910 -131337622 - L1MB5 LINE L1 -1763 4619 4042 * 1407 202 55 17 chr5 71747908 71748324 -131337208 + L1M4c LINE L1 2006 2437 -3947 * 1502 200 66 40 chr5 71748327 71748791 -131336741 - L1MB5 LINE L1 -4488 1896 1309 927 196 27 22 chr5 71748783 71749008 -131336524 + L1M4 LINE L1 1174 1399 -5143 * 1985 176 69 26 chr5 71749006 71749427 -131336105 + L1M4 LINE L1 738 1176 -5366 1087 270 98 50 chr5 71749426 71749738 -131335794 - L1M4 LINE L1 -6036 506 161 * 2171 105 0 3 chr5 71749738 71750034 -131335498 + AluSg SINE Alu 1 295 -15 1087 270 98 50 chr5 71750034 71750203 -131335329 - L1M4 LINE L1 -6381 161 2 2260 74 0 13 chr5 71750355 71750654 -131334878 + AluSc SINE Alu 1 295 -14 249 139 0 0 chr5 71751028 71751071 -131334461 + (A)n Simple_repeat Simple_repeat 1 43 0 2307 104 0 0 chr5 71751477 71751775 -131333757 - AluSg SINE Alu -12 298 1 768 229 68 0 chr5 71752004 71752196 -131333336 - MIR SINE MIR 0 262 58 1965 114 36 7 chr5 71752221 71752502 -131333030 + AluSx SINE Alu 1 289 -23 335 325 82 20 chr5 71753333 71753588 -131331944 - L1M4 LINE L1 -3317 2829 2559 21 71 0 0 chr5 71753803 71753845 -131331687 + AT_rich Low_complexity Low_complexity 1 42 0 2424 97 0 0 chr5 71753851 71754162 -131331370 - AluY SINE Alu 0 311 1 412 263 31 50 chr5 71754174 71754433 -131331099 - L1M4 LINE L1 -3783 2363 2110 195 42 0 0 chr5 71754479 71754503 -131331029 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 3225 237 37 49 chr5 71754625 71755677 -131329855 - L1M4 LINE L1 -1510 4636 3598 877 156 0 8 chr5 71756120 71756248 -131329284 + FLAM_C SINE Alu 1 127 -6 1291 293 85 45 chr5 71756418 71756619 -131328913 + HERV16 LTR ERVL 1048 1239 -3757 1667 202 79 9 chr5 71756619 71756960 -131328572 + MLT1A1 LTR MaLR 1 365 0 2243 166 43 19 chr5 71756962 71757384 -131328148 + MSTB1 LTR MaLR 1 432 0 1291 293 85 45 chr5 71757384 71757650 -131327882 + HERV16 LTR ERVL 1239 1537 -3459 1109 192 43 34 chr5 71757654 71757888 -131327644 - MLT2D LTR ERVL 0 414 179 623 219 12 50 chr5 71757889 71758049 -131327483 + HERV16 LTR ERVL 885 1038 -3958 1045 167 0 6 chr5 71758113 71758287 -131327245 - MLT2D LTR ERVL -241 173 1 1671 276 99 44 chr5 71758290 71758697 -131326835 + ERVL LTR ERVL 1612 2072 -2924 2220 168 0 29 chr5 71758697 71759073 -131326459 - MLT1A1 LTR MaLR 0 365 1 1671 276 99 44 chr5 71759073 71759328 -131326204 + ERVL LTR ERVL 2072 2311 -2685 413 264 129 7 chr5 71759310 71759450 -131326082 + ERVL LTR ERVL 3332 3488 -2276 * 871 306 84 66 chr5 71759489 71760666 -131324866 + ERVL LTR ERVL 3257 4454 -542 626 110 70 0 chr5 71760699 71760799 -131324733 + HY1 scRNA scRNA 1 107 -5 2576 71 0 0 chr5 71760816 71761125 -131324407 + AluY SINE Alu 1 309 -2 545 290 293 7 chr5 71761125 71761528 -131324004 - L3 LINE CR1 -476 1101 584 737 318 58 4 chr5 71761534 71761808 -131323724 + L3 LINE CR1 1043 1331 -246 1850 192 43 29 chr5 71761827 71762324 -131323208 + MER39 LTR ERV1 1 707 0 1577 171 59 0 chr5 71762424 71762598 -131322934 - AluJb SINE Alu -9 303 104 201 39 0 0 chr5 71762598 71762624 -131322908 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1577 171 59 0 chr5 71762624 71762735 -131322797 - AluJb SINE Alu -208 104 1 2187 107 6 28 chr5 71766461 71766778 -131318754 - AluSx SINE Alu -2 310 1 204 352 0 0 chr5 71767154 71767225 -131318307 - L3 LINE CR1 -264 1313 1243 1772 143 73 32 chr5 71767314 71767656 -131317876 - MLT1A1 LTR MaLR -9 356 1 1744 191 0 13 chr5 71767803 71768106 -131317426 + AluJo SINE Alu 1 299 -13 199 351 0 0 chr5 71768503 71768560 -131316972 - L2 LINE L2 -5 3267 3211 1887 158 0 13 chr5 71768920 71769231 -131316301 - AluJb SINE Alu -5 307 1 207 268 192 19 chr5 71769555 71769715 -131315817 - MIR3 SINE MIR -62 146 5 25 31 0 0 chr5 71770078 71770110 -131315422 + AT_rich Low_complexity Low_complexity 1 32 0 315 270 15 44 chr5 71771965 71772102 -131313430 - MLT1H LTR MaLR -376 173 41 2364 185 73 45 chr5 71772264 71772315 -131313217 - L1MB3 LINE L1 -1 6182 6134 2078 99 20 20 chr5 71772315 71772607 -131312925 - AluSx SINE Alu -20 292 1 2364 185 73 45 chr5 71772607 71773155 -131312377 - L1MB3 LINE L1 -49 6134 5566 211 224 69 0 chr5 71775324 71775382 -131310150 + MIR SINE MIR 92 153 -109 443 203 183 20 chr5 71775568 71775765 -131309767 + L1MC5 LINE L1 7701 7929 -32 2158 139 7 0 chr5 71776085 71776395 -131309137 - AluSq SINE Alu -1 312 1 2259 148 28 46 chr5 71776395 71776788 -131308744 - L1PA16 LINE L1 -12 6154 5769 6741 86 28 37 chr5 71776790 71777168 -131308364 - L1PA13 LINE L1 0 6163 5783 2412 83 7 0 chr5 71777168 71777470 -131308062 - AluSp SINE Alu -9 304 1 6741 86 28 37 chr5 71777470 71778836 -131306696 - L1PA13 LINE L1 -380 5783 4433 3610 124 3 5 chr5 71778845 71779420 -131306112 - L1PA16 LINE L1 -375 5791 5218 28 0 0 0 chr5 71779689 71779717 -131305815 + AT_rich Low_complexity Low_complexity 1 28 0 255 298 48 48 chr5 71780659 71780783 -131304749 + MARNA DNA Mariner 411 534 -52 540 278 47 12 chr5 71782462 71782631 -131302901 + MIR SINE MIR 84 258 -4 2314 76 3 20 chr5 71783577 71783878 -131301654 - AluY SINE Alu -15 296 1 857 168 0 0 chr5 71784614 71784751 -131300781 - FLAM_C SINE Alu -6 137 1 2508 81 0 0 chr5 71784809 71785117 -131300415 + AluSc SINE Alu 1 308 -1 2610 51 0 0 chr5 71785436 71785747 -131299785 + AluY SINE Alu 1 311 0 438 292 24 30 chr5 71790716 71790884 -131294648 + MIR SINE MIR 93 259 -3 204 163 0 23 chr5 71790886 71790929 -131294603 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2267 121 0 0 chr5 71791255 71791562 -131293970 + AluSx SINE Alu 1 307 -5 729 307 12 17 chr5 71791848 71792089 -131293443 + MIR SINE MIR 2 241 -21 2253 148 9 0 chr5 71792592 71792937 -131292595 - MER7A DNA MER2_type 0 346 1 230 325 117 8 chr5 71792954 71793074 -131292458 - MIR SINE MIR -122 140 8 245 111 12 37 chr5 71793628 71793709 -131291823 + (CAAAA)n Simple_repeat Simple_repeat 3 81 0 271 308 119 84 chr5 71796733 71797136 -131288396 + L2 LINE L2 2856 3272 0 297 49 0 0 chr5 71797234 71797275 -131288257 - MADE1 DNA Mariner -5 75 35 2523 37 10 0 chr5 71797635 71797933 -131287599 - AluY SINE Alu -10 301 1 2396 94 3 0 chr5 71797983 71798281 -131287251 - AluSp SINE Alu -14 299 1 2033 148 3 0 chr5 71798364 71798667 -131286865 - AluJo SINE Alu -8 304 1 21 36 0 0 chr5 71798919 71798947 -131286585 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 71798979 71799000 -131286532 + AT_rich Low_complexity Low_complexity 1 21 0 411 245 170 19 chr5 71799789 71799948 -131285584 + MIR SINE MIR 13 195 -67 360 0 0 0 chr5 71799950 71799990 -131285542 + (CA)n Simple_repeat Simple_repeat 2 41 0 1860 169 0 3 chr5 71800250 71800540 -131284992 - AluJb SINE Alu -23 289 1 25 51 0 0 chr5 71800545 71800584 -131284948 + AT_rich Low_complexity Low_complexity 1 39 0 41208 32 25 1 chr5 71801347 71807356 -131278176 + L1PA2 LINE L1 1 6154 -1 557 261 85 0 chr5 71807639 71807792 -131277740 - MIR3 SINE MIR -14 194 29 894 114 15 0 chr5 71808180 71808311 -131277221 - FLAM_C SINE Alu 0 133 1 2427 78 0 0 chr5 71808321 71808616 -131276916 - AluY SINE Alu -16 295 1 2478 64 0 0 chr5 71809440 71809738 -131275794 + AluY SINE Alu 1 298 -13 183 287 172 0 chr5 71809743 71809830 -131275702 - MIR SINE MIR -112 150 49 2271 96 7 0 chr5 71811050 71811342 -131274190 + AluSc SINE Alu 1 294 -15 501 182 0 18 chr5 71811486 71811596 -131273936 + LTR2B LTR ERV1 383 490 0 39400 45 26 26 chr5 71811596 71817002 -131268530 + Harlequin LTR ERV1 1 5407 -1489 269 288 0 0 chr5 71817007 71817066 -131268466 - L2 LINE L2 -87 3185 3127 276 149 0 0 chr5 71817242 71817289 -131268243 + (CA)n Simple_repeat Simple_repeat 2 48 0 706 356 19 27 chr5 71817756 71818124 -131267408 + L2 LINE L2 2481 2845 -469 365 264 186 0 chr5 71818253 71818420 -131267112 - MIR SINE MIR -12 250 53 309 256 58 0 chr5 71818417 71818503 -131267029 - MIR SINE MIR -2 260 170 * 21 71 0 0 chr5 71818780 71818822 -131266710 + AT_rich Low_complexity Low_complexity 1 42 0 245 259 212 0 chr5 71818828 71818913 -131266619 - MIR SINE MIR -69 139 37 2101 113 23 23 chr5 71819472 71819774 -131265758 + AluSg SINE Alu 3 304 -6 310 300 12 0 chr5 71819805 71819885 -131265647 - MIR SINE MIR -32 230 150 201 95 0 48 chr5 71820022 71820064 -131265468 + (GAA)n Simple_repeat Simple_repeat 2 41 0 267 106 45 15 chr5 71820064 71820130 -131265402 + GA-rich Low_complexity Low_complexity 2 69 0 404 52 0 0 chr5 71820280 71820338 -131265194 + L1PA8 LINE L1 6115 6172 0 26 0 0 0 chr5 71820342 71820368 -131265164 + AT_rich Low_complexity Low_complexity 1 26 0 221 302 19 0 chr5 71821875 71821928 -131263604 - L2 LINE L2 -4 3268 3215 485 156 13 0 chr5 71822127 71822204 -131263328 - AluJ/FLAM SINE Alu -229 83 6 294 241 45 90 chr5 71826668 71826745 -131258787 + MIR SINE MIR 136 206 -56 821 232 33 38 chr5 71826745 71826956 -131258576 + MER63A DNA MER1_type 1 210 0 294 241 45 90 chr5 71826956 71827011 -131258521 + MIR SINE MIR 206 262 0 255 283 72 29 chr5 71827676 71827814 -131257718 + MLT1K LTR MaLR 445 588 0 244 240 20 0 chr5 71827820 71827870 -131257662 - L2 LINE L2 -5 3267 3217 380 296 38 57 chr5 71828578 71828852 -131256680 + L1ME4a LINE L1 5352 5618 -527 287 188 29 0 chr5 71829098 71829167 -131256365 + L1ME4a LINE L1 5938 6008 -113 2000 190 38 2 chr5 71829323 71829718 -131255814 + MER47B DNA MER2_type 1 409 -9 2453 44 47 3 chr5 71831399 71831697 -131253835 + AluY SINE Alu 1 311 0 487 231 15 15 chr5 71831782 71831912 -131253620 - MER104 DNA Tc2 -49 131 2 21 0 0 0 chr5 71833034 71833055 -131252477 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 71834859 71834894 -131250638 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 888 152 7 0 chr5 71838399 71838544 -131246988 + FRAM SINE Alu 14 159 -17 24 53 0 0 chr5 71840823 71840861 -131244671 + AT_rich Low_complexity Low_complexity 1 38 0 383 264 58 25 chr5 71841456 71841577 -131243955 - MER119 DNA MER1_type 0 583 459 270 240 0 0 chr5 71841606 71841656 -131243876 - MER119 DNA MER1_type -480 103 54 1975 96 7 7 chr5 71841788 71842059 -131243473 + AluSx SINE Alu 36 306 -6 180 0 0 0 chr5 71842155 71842175 -131243357 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 363 89 0 0 chr5 71842174 71842230 -131243302 + (CA)n Simple_repeat Simple_repeat 1 56 0 32 0 0 0 chr5 71842685 71842717 -131242815 + AT_rich Low_complexity Low_complexity 1 32 0 822 214 11 11 chr5 71843578 71843756 -131241776 + MER5B DNA MER1_type 1 178 0 858 243 35 0 chr5 71844212 71844385 -131241147 + MER5A DNA MER1_type 9 187 -2 2606 23 3 0 chr5 71845506 71845806 -131239726 + AluY SINE Alu 1 301 -10 216 0 0 0 chr5 71846297 71846321 -131239211 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2127 130 0 9 chr5 71846655 71846970 -131238562 + AluSx SINE Alu 1 312 0 209 268 12 85 chr5 71847211 71847293 -131238239 - L2 LINE L2 -10 3262 3187 993 179 22 0 chr5 71847360 71847544 -131237988 - MER5A DNA MER1_type 0 189 2 222 118 0 0 chr5 71847748 71847782 -131237750 + (T)n Simple_repeat Simple_repeat 1 34 0 200 329 98 12 chr5 71847969 71848051 -131237481 - L3b LINE CR1 -9 1574 1486 192 298 96 21 chr5 71848118 71848212 -131237320 - L3b LINE CR1 -336 1247 1147 1799 164 24 0 chr5 71848695 71848982 -131236550 + AluJo SINE Alu 1 294 -18 21 0 0 0 chr5 71848990 71849011 -131236521 + AT_rich Low_complexity Low_complexity 1 21 0 315 240 70 70 chr5 71850525 71850625 -131234907 + MIR SINE MIR 89 188 -74 2344 160 94 16 chr5 71851405 71851906 -131233626 + L1MB5 LINE L1 5627 6166 -8 23 54 0 0 chr5 71851948 71851985 -131233547 + AT_rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr5 71852118 71852147 -131233385 + (CA)n Simple_repeat Simple_repeat 2 30 0 686 197 8 8 chr5 71853251 71853373 -131232159 - FLAM_A SINE Alu -11 122 1 5832 231 119 50 chr5 71853382 71853516 -131232016 + L1ME LINE L1 2371 2494 -3652 304 185 0 46 chr5 71853516 71853581 -131231951 - MADE1 DNA Mariner 0 80 19 5832 231 119 50 chr5 71853581 71854129 -131231403 + L1ME LINE L1 2494 3002 -3144 2268 71 0 10 chr5 71854129 71854426 -131231106 + AluY SINE Alu 1 294 -17 5832 231 119 50 chr5 71854426 71856140 -131229392 + L1ME LINE L1 3002 5004 -1142 26 30 0 0 chr5 71856364 71856397 -131229135 + AT_rich Low_complexity Low_complexity 1 33 0 801 214 107 4 chr5 71856398 71856852 -131228680 + L1ME LINE L1 4996 5589 -577 3149 159 60 3 chr5 71856853 71857468 -131228064 - L1MA9 LINE L1 0 6312 5659 2355 74 0 3 chr5 71857468 71857766 -131227766 - AluY SINE Alu -14 297 1 3149 159 60 3 chr5 71857766 71857784 -131227748 - L1MA9 LINE L1 -653 5659 5643 34 42 0 0 chr5 71860119 71860167 -131225365 + AT_rich Low_complexity Low_complexity 1 48 0 2131 111 10 0 chr5 71860260 71860549 -131224983 - AluSx SINE Alu -20 292 1 25 51 0 0 chr5 71860830 71860869 -131224663 + AT_rich Low_complexity Low_complexity 1 39 0 492 330 75 41 chr5 71861322 71861589 -131223943 - Charlie8 DNA MER1_type -2141 276 1 5405 228 129 21 chr5 71862119 71863753 -131221779 + L1M3c LINE L1 173 1917 -4466 365 261 82 11 chr5 71863778 71863962 -131221570 + L1M3c LINE L1 2025 2221 -4163 458 83 30 69 chr5 71863962 71864329 -131221203 + (TA)n Simple_repeat Simple_repeat 1 352 0 480 129 41 29 chr5 71864368 71864539 -131220993 + (TA)n Simple_repeat Simple_repeat 2 174 0 12649 182 57 25 chr5 71864539 71865492 -131220040 + L1MA9 LINE L1 2207 3128 -3420 1922 151 3 3 chr5 71865492 71865790 -131219742 + AluSx SINE Alu 1 298 -14 12649 182 57 25 chr5 71865790 71869035 -131216497 + L1MA9 LINE L1 3128 6548 0 3419 64 18 0 chr5 71869050 71869486 -131216046 + MLT2A1 LTR ERVL 1 444 0 1486 248 65 62 chr5 71869663 71869998 -131215534 + L1M3c LINE L1 2667 2999 -3383 1572 166 4 0 chr5 71869998 71870245 -131215287 - AluJo SINE Alu -64 248 1 1486 248 65 62 chr5 71870245 71870770 -131214762 + L1M3c LINE L1 2999 3521 -2861 1556 161 50 30 chr5 71870770 71871069 -131214463 + AluJo SINE Alu 1 305 -7 1486 248 65 62 chr5 71871069 71871463 -131214069 + L1M3c LINE L1 3521 4068 -2314 2029 133 3 0 chr5 71871463 71871757 -131213775 + AluJb SINE Alu 1 295 -17 1486 248 65 62 chr5 71871757 71871843 -131213689 + L1M3c LINE L1 4068 4152 -2230 * 2201 219 90 25 chr5 71871842 71872002 -131213530 + L1ME2 LINE L1 4181 4329 -1899 1826 138 11 0 chr5 71872002 71872271 -131213261 + AluJb SINE Alu 24 295 -17 2201 219 90 25 chr5 71872271 71872690 -131212842 + L1ME2 LINE L1 4329 4719 -1509 1937 61 0 0 chr5 71872690 71872936 -131212596 + L1PA5 LINE L1 5907 6152 -2 2201 219 90 25 chr5 71872936 71873833 -131211699 + L1ME2 LINE L1 4719 5892 -336 453 203 0 0 chr5 71873848 71873927 -131211605 - FLAM_A SINE Alu -63 79 1 589 221 120 101 chr5 71873929 71874123 -131211409 + L1ME2 LINE L1 5884 6088 -140 1552 198 54 17 chr5 71874123 71874472 -131211060 + MLT1A1 LTR MaLR 4 365 0 589 221 120 101 chr5 71874472 71874594 -131210938 + L1ME2 LINE L1 6088 6206 -22 310 259 38 101 chr5 71874647 71874805 -131210727 + L1MC4 LINE L1 7832 7979 -63 2330 107 0 0 chr5 71874881 71875189 -131210343 - AluSx SINE Alu -4 308 1 565 242 27 13 chr5 71878244 71878393 -131207139 - MIR SINE MIR -6 256 106 245 292 156 31 chr5 71878583 71878679 -131206853 + MIR SINE MIR 42 149 -59 * 332 338 181 10 chr5 71878677 71878881 -131206651 + MIR SINE MIR 16 254 -8 701 235 94 94 chr5 71878893 71879299 -131206233 + LTR33A LTR ERVL 9 492 -31 180 0 0 0 chr5 71879337 71879357 -131206175 + (CAT)n Simple_repeat Simple_repeat 2 21 0 958 231 28 0 chr5 71879417 71879633 -131205899 - MER58A DNA MER1_type 0 224 3 456 325 153 4 chr5 71879717 71879972 -131205560 - L3 LINE CR1 -1 1576 1284 734 306 178 26 chr5 71880081 71880464 -131205068 - L2 LINE L2 -9 3304 2864 264 309 53 0 chr5 71881159 71881253 -131204279 + MIR SINE MIR 43 141 -121 323 311 14 108 chr5 71881678 71881826 -131203706 + MER91A DNA MER1_type 63 196 0 1596 160 58 4 chr5 71882242 71882517 -131203015 + AluJb SINE Alu 1 290 -22 189 175 0 0 chr5 71882737 71882777 -131202755 + (TG)n Simple_repeat Simple_repeat 2 41 0 2200 212 123 32 chr5 71882780 71883444 -131202088 + MER50 LTR ERV1 10 734 0 525 342 51 26 chr5 71883873 71884107 -131201425 - MIR SINE MIR -16 246 7 1404 88 10 5 chr5 71886072 71886264 -131199268 - AluSq SINE Alu -119 194 2 42 0 0 0 chr5 71886264 71886306 -131199226 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 71886324 71886360 -131199172 + AT_rich Low_complexity Low_complexity 1 36 0 1697 163 19 13 chr5 71886609 71886916 -131198616 - AluJb SINE Alu -3 309 1 2165 106 0 52 chr5 71887540 71887869 -131197663 - AluJb SINE Alu 0 312 1 180 161 32 0 chr5 71888647 71888678 -131196854 + L2 LINE L2 3224 3255 -17 542 269 99 31 chr5 71888757 71888980 -131196552 + MLT1L LTR MaLR 1 238 -377 1539 94 77 0 chr5 71889000 71889233 -131196299 - L1PB1 LINE L1 0 6151 5901 208 139 0 0 chr5 71889557 71889593 -131195939 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 834 179 14 0 chr5 71889600 71889740 -131195792 - FRAM SINE Alu -18 158 17 952 193 56 0 chr5 71889846 71890043 -131195489 - MER3 DNA MER1_type 0 209 2 228 67 0 0 chr5 71890681 71890711 -131194821 + (TC)n Simple_repeat Simple_repeat 2 31 0 773 163 0 22 chr5 71890718 71890853 -131194679 - FLAM_C SINE Alu 0 133 2 300 333 129 38 chr5 71890856 71891276 -131194256 + L2 LINE L2 611 1068 -2246 412 326 148 72 chr5 71891392 71891723 -131193809 + L2 LINE L2 2917 3272 0 2441 261 119 20 chr5 71891819 71892800 -131192732 - L2 LINE L2 -146 3167 2066 1816 94 10 71 chr5 71892800 71893134 -131192398 + AluSx SINE Alu 1 312 0 2441 261 119 20 chr5 71893134 71893167 -131192365 - L2 LINE L2 -1247 2066 2038 1540 265 157 36 chr5 71893323 71893578 -131191954 - L2 LINE L2 -953 2361 2138 1845 103 3 73 chr5 71893578 71893916 -131191616 + AluSx SINE Alu 1 317 0 1540 265 157 36 chr5 71893916 71894301 -131191231 - L2 LINE L2 -1176 2138 1642 1445 248 93 27 chr5 71894304 71894889 -131190643 - L2 LINE L2 -2607 707 2 26 64 0 0 chr5 71895360 71895407 -131190125 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr5 71895741 71895770 -131189762 + AT_rich Low_complexity Low_complexity 1 29 0 754 301 119 40 chr5 71898502 71899098 -131186434 + L2 LINE L2 2499 3141 -172 664 138 268 0 chr5 71899155 71899293 -131186239 - MER3 DNA MER1_type -26 183 9 208 365 0 0 chr5 71899300 71899363 -131186169 + L2 LINE L2 3251 3313 0 408 264 39 39 chr5 71900219 71900348 -131185184 - MIR3 SINE MIR -3 205 77 205 308 25 62 chr5 71901078 71901223 -131184309 + MIR SINE MIR 63 205 -57 504 287 94 22 chr5 71903765 71903988 -131181544 + MIR SINE MIR 2 240 -22 2196 109 0 7 chr5 71903988 71904291 -131181241 - AluSx SINE Alu -11 301 1 2094 103 34 0 chr5 71905305 71905596 -131179936 + AluSg SINE Alu 1 301 -9 608 227 0 15 chr5 71906554 71906686 -131178846 - FLAM_A SINE Alu -3 130 1 25 0 0 0 chr5 71906767 71906792 -131178740 + AT_rich Low_complexity Low_complexity 1 25 0 2005 119 0 30 chr5 71906839 71907142 -131178390 + AluJb SINE Alu 5 298 -14 25 0 0 0 chr5 71908581 71908606 -131176926 + AT_rich Low_complexity Low_complexity 1 25 0 207 0 0 0 chr5 71908872 71908895 -131176637 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2090 104 0 4 chr5 71908897 71909177 -131176355 - AluSg SINE Alu -29 281 3 790 186 42 48 chr5 71909270 71909437 -131176095 + FRAM SINE Alu 1 166 0 222 302 19 0 chr5 71909832 71909885 -131175647 - L2 LINE L2 -4 3268 3215 550 128 0 0 chr5 71910084 71910162 -131175370 - AluJ/FLAM SINE Alu -229 83 6 4720 130 21 8 chr5 71910450 71911209 -131174323 - L1PB3 LINE L1 -1 6153 5385 425 294 93 49 chr5 71911373 71911554 -131173978 - L1MEd LINE L1 -863 1627 1455 2039 149 0 3 chr5 71911554 71911855 -131173677 - AluJb SINE Alu -12 300 1 425 294 93 49 chr5 71911855 71911923 -131173609 - L1MEd LINE L1 -1035 1455 1391 2157 119 0 0 chr5 71911923 71912225 -131173307 - AluSx SINE Alu -8 304 3 425 294 93 49 chr5 71912225 71912448 -131173084 - L1MEd LINE L1 -1099 1391 1050 266 294 147 49 chr5 71912465 71912649 -131172883 - L1MEd LINE L1 -5366 753 552 356 250 108 61 chr5 71913490 71913638 -131171894 + L3 LINE CR1 1349 1503 -74 24 53 0 0 chr5 71914288 71914326 -131171206 + AT_rich Low_complexity Low_complexity 1 38 0 1074 121 0 13 chr5 71914706 71914863 -131170669 - MER4E LTR ERV1 0 779 625 * 4016 149 15 8 chr5 71914862 71915525 -131170007 - MER4D LTR ERV1 -235 668 1 186 43 0 0 chr5 71916065 71916088 -131169444 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 554 315 60 37 chr5 71916306 71916604 -131168928 - L3b LINE CR1 -106 1477 1173 27 49 0 0 chr5 71916952 71916993 -131168539 + AT_rich Low_complexity Low_complexity 1 41 0 399 316 26 0 chr5 71917998 71918115 -131167417 - L2 LINE L2 0 3313 3194 994 262 28 24 chr5 71918132 71918422 -131167110 - L2 LINE L2 -2 3311 3021 281 238 98 67 chr5 71918414 71918607 -131166925 - L2 LINE L2 -131 3182 2984 * 22 0 0 0 chr5 71918913 71918935 -131166597 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr5 71920049 71920072 -131165460 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 71920114 71920138 -131165394 + AT_rich Low_complexity Low_complexity 1 24 0 2227 100 3 0 chr5 71920140 71920440 -131165092 - AluSp SINE Alu -12 301 1 2290 92 0 19 chr5 71920913 71921228 -131164304 - AluSc SINE Alu 0 309 1 1930 130 32 0 chr5 71921863 71922148 -131163384 + AluSx SINE Alu 1 294 -18 2360 98 0 0 chr5 71922879 71923185 -131162347 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr5 71924451 71924474 -131161058 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 71925452 71925473 -131160059 + (CTAA)n Simple_repeat Simple_repeat 1 21 0 22 88 0 0 chr5 71925843 71925900 -131159632 + AT_rich Low_complexity Low_complexity 1 57 0 30 59 0 0 chr5 71926058 71926109 -131159423 + AT_rich Low_complexity Low_complexity 1 51 0 1772 159 35 0 chr5 71926830 71927120 -131158412 - AluJo SINE Alu -12 300 1 812 270 18 25 chr5 71927532 71927817 -131157715 - L1ME3A LINE L1 -224 5946 5664 502 103 26 0 chr5 71927823 71927901 -131157631 + MADE1 DNA Mariner 1 80 0 180 0 114 0 chr5 71930907 71930942 -131154590 + A-rich Low_complexity Low_complexity 2 40 0 25 51 0 0 chr5 71931554 71931593 -131153939 + AT_rich Low_complexity Low_complexity 1 39 0 189 346 92 20 chr5 71931762 71931915 -131153617 - MIR SINE MIR 0 262 99 302 361 83 8 chr5 71933023 71933156 -131152376 - MIR3 SINE MIR -62 146 4 2435 68 0 0 chr5 71933231 71933539 -131151993 - AluY SINE Alu -3 308 1 209 405 86 9 chr5 71934139 71934361 -131151171 - L2 LINE L2 -568 2746 2508 1942 149 0 10 chr5 71934414 71934716 -131150816 + AluSx SINE Alu 1 299 -13 521 110 61 14 chr5 71934716 71935005 -131150527 + (TA)n Simple_repeat Simple_repeat 1 302 0 705 231 218 0 chr5 71935454 71935670 -131149862 + Charlie2 DNA MER1_type 60 322 -2460 2645 209 97 51 chr5 71935717 71936633 -131148899 + Charlie2 DNA MER1_type 1905 2862 0 1604 178 7 0 chr5 71937062 71937338 -131148194 - AluJo SINE Alu -34 278 1 1220 250 59 18 chr5 71937430 71937886 -131147646 + L1MC4 LINE L1 7568 8042 0 21 0 0 0 chr5 71938148 71938169 -131147363 + AT_rich Low_complexity Low_complexity 1 21 0 297 208 0 0 chr5 71938367 71938444 -131147088 + (CA)n Simple_repeat Simple_repeat 2 78 0 1162 236 133 5 chr5 71938464 71938854 -131146678 + LTR40c LTR ERVL 5 444 -21 * 1283 212 77 13 chr5 71938833 71939144 -131146388 - Charlie1a DNA MER1_type -1098 357 27 979 262 105 21 chr5 71939148 71939753 -131145779 - L1M3 LINE L1 -512 5656 5006 515 97 0 0 chr5 71939753 71939825 -131145707 - L1MC/D LINE L1 -703 5630 5559 357 261 87 14 chr5 71941370 71941508 -131144024 + L1M4 LINE L1 4593 4740 -1406 3032 124 4 80 chr5 71941636 71942176 -131143356 - MER1A DNA MER1_type 0 529 31 243 0 0 0 chr5 71942187 71942214 -131143318 + (CA)n Simple_repeat Simple_repeat 2 28 0 1680 171 7 20 chr5 71942420 71942517 -131143015 + AluJb SINE Alu 1 98 -214 2515 135 41 7 chr5 71942517 71942931 -131142601 + MSTA LTR MaLR 1 428 0 1680 171 7 20 chr5 71942931 71943126 -131142406 + AluJb SINE Alu 98 289 -23 23 54 0 0 chr5 71943838 71943875 -131141657 + AT_rich Low_complexity Low_complexity 1 37 0 459 0 0 0 chr5 71945723 71945774 -131139758 + (CA)n Simple_repeat Simple_repeat 2 52 0 267 264 38 9 chr5 71945958 71946064 -131139468 + (TATATG)n Simple_repeat Simple_repeat 6 114 0 2353 186 77 82 chr5 71946490 71947318 -131138214 + L1MCa LINE L1 738 1561 -4865 2018 247 27 57 chr5 71947317 71947512 -131138020 + L1MCa LINE L1 1810 2009 -4417 * 479 147 9 18 chr5 71947512 71947621 -131137911 + L1MA4 LINE L1 6192 6299 -1 2018 247 27 57 chr5 71947621 71948505 -131137027 + L1MCa LINE L1 2009 2802 -3624 2091 107 10 10 chr5 71948505 71948805 -131136727 - AluSx SINE Alu -12 300 1 2018 247 27 57 chr5 71948805 71948969 -131136563 + L1MCa LINE L1 2802 2969 -3457 1422 243 37 57 chr5 71948985 71949402 -131136130 + L1ME1 LINE L1 2135 2508 -3707 2126 109 3 7 chr5 71949402 71949696 -131135836 - AluSx SINE Alu -19 293 1 1422 243 37 57 chr5 71949696 71949968 -131135564 + L1ME1 LINE L1 2508 2784 -3431 * 6978 106 14 23 chr5 71949950 71950385 -131135147 + L1MA2 LINE L1 4944 5382 -922 2436 66 0 7 chr5 71950385 71950689 -131134843 + AluY SINE Alu 1 302 -9 6978 106 14 23 chr5 71950689 71951628 -131133904 + L1MA2 LINE L1 5382 6304 0 619 219 108 27 chr5 71951643 71951991 -131133541 + L1ME1 LINE L1 2776 3243 -2972 1093 214 103 4 chr5 71951991 71952262 -131133270 + AluJb SINE Alu 1 298 -4 701 124 0 16 chr5 71952267 71952388 -131133144 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 1135 222 80 56 chr5 71952388 71952431 -131133101 + L1ME1 LINE L1 3228 3268 -2947 2235 102 3 0 chr5 71952431 71952736 -131132796 - AluSp SINE Alu -7 306 1 1135 222 80 56 chr5 71952736 71953148 -131132384 + L1ME1 LINE L1 3268 3700 -2515 7251 153 14 26 chr5 71953148 71954297 -131131235 - L1PA13 LINE L1 0 6163 5028 2389 103 0 0 chr5 71954297 71954609 -131130923 - AluSx SINE Alu 0 312 1 7251 153 14 26 chr5 71954609 71955606 -131129926 - L1PA13 LINE L1 -1135 5028 4020 1135 222 80 56 chr5 71955606 71955684 -131129848 + L1ME1 LINE L1 3700 3775 -2440 7513 32 0 0 chr5 71955712 71956785 -131128747 - L1PA4 LINE L1 -3 6152 5081 978 226 88 13 chr5 71956796 71957101 -131128431 + L1ME1 LINE L1 4969 5296 -919 342 201 45 22 chr5 71957105 71957239 -131128293 + (TA)n Simple_repeat Simple_repeat 1 137 0 499 173 144 35 chr5 71957239 71957401 -131128131 + L1ME1 LINE L1 5305 5479 -743 1470 219 117 32 chr5 71957428 71957899 -131127633 + L1ME1 LINE L1 5719 6229 -6 1725 163 10 20 chr5 71958084 71958384 -131127148 - AluJo SINE Alu -15 297 1 338 244 129 50 chr5 71958503 71958704 -131126828 - L1MC5 LINE L1 -49 7912 7696 2173 185 57 2 chr5 71959533 71959938 -131125594 + MSTB1 LTR MaLR 1 427 -5 26 50 0 0 chr5 71962519 71962559 -131122973 + AT_rich Low_complexity Low_complexity 1 40 0 34 24 0 0 chr5 71963512 71963553 -131121979 + AT_rich Low_complexity Low_complexity 1 41 0 234 0 0 0 chr5 71964877 71964903 -131120629 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 252 0 0 0 chr5 71964902 71964930 -131120602 + (GA)n Simple_repeat Simple_repeat 2 29 0 210 348 22 0 chr5 71965240 71965329 -131120203 - MIR SINE MIR -111 151 61 189 240 21 104 chr5 71965356 71965452 -131120080 - L3 LINE CR1 -627 950 863 183 289 0 115 chr5 71965657 71965761 -131119771 - MIR SINE MIR -73 189 98 285 51 0 0 chr5 71966586 71966625 -131118907 + (A)n Simple_repeat Simple_repeat 1 39 0 339 255 43 0 chr5 71968102 71968196 -131117336 + Charlie2 DNA MER1_type 45 142 -2720 202 385 0 15 chr5 71968198 71968263 -131117269 - L2 LINE L2 -20 3252 3189 23 33 0 0 chr5 71970227 71970257 -131115275 + AT_rich Low_complexity Low_complexity 1 30 0 7346 211 39 30 chr5 71971129 71973631 -131111901 + L1M2c LINE L1 774 3251 -3537 3841 191 61 5 chr5 71973635 71974662 -131110870 + L1M2c LINE L1 3468 4552 -2236 1486 212 92 17 chr5 71974762 71975219 -131110313 + L1M2 LINE L1 2812 3311 -3537 12558 176 18 9 chr5 71975223 71976357 -131109175 + L1M2 LINE L1 3528 4650 -2198 2476 106 28 17 chr5 71976357 71976717 -131108815 - THE1B LTR MaLR 0 364 1 12558 176 18 9 chr5 71976717 71978137 -131107395 + L1M2 LINE L1 4650 6105 -743 473 287 82 10 chr5 71978571 71978843 -131106689 - L1MC4a LINE L1 -225 5896 5630 440 385 62 36 chr5 71978871 71979320 -131106212 + L2 LINE L2 2807 3267 -5 8488 155 39 47 chr5 71980231 71982962 -131102570 + L1MA7 LINE L1 3558 6286 -5 31 44 0 0 chr5 71982985 71983030 -131102502 + AT_rich Low_complexity Low_complexity 1 45 0 40 49 0 0 chr5 71983562 71983623 -131101909 + AT_rich Low_complexity Low_complexity 1 61 0 2203 102 10 0 chr5 71983745 71984039 -131101493 + AluSx SINE Alu 1 297 -15 973 212 120 11 chr5 71984357 71984631 -131100901 - L3b LINE CR1 -178 1405 1102 1860 134 22 0 chr5 71984844 71985120 -131100412 - AluSx SINE Alu -30 282 1 890 192 0 34 chr5 71985812 71985989 -131099543 + FAM SINE Alu 5 175 0 363 263 57 29 chr5 71986467 71986642 -131098890 + HAL1 LINE L1 2250 2429 -78 388 282 20 103 chr5 71987403 71987598 -131097934 - MIR SINE MIR -65 197 19 395 271 0 28 chr5 71987842 71987949 -131097583 - L2 LINE L2 0 3313 3210 246 188 0 78 chr5 71988493 71988557 -131096975 + MIR SINE MIR 107 165 -97 23 0 0 0 chr5 71991107 71991130 -131094402 + AT_rich Low_complexity Low_complexity 1 23 0 4463 201 46 45 chr5 71991290 71992589 -131092943 + L1MA8 LINE L1 2799 4098 -2048 4373 160 49 43 chr5 71992585 71994182 -131091350 + L1MA8 LINE L1 4536 6171 -120 * 2282 124 74 12 chr5 71994182 71994585 -131090947 - MSTA LTR MaLR 0 428 1 4373 160 49 43 chr5 71994585 71994685 -131090847 + L1MA8 LINE L1 6171 6269 -22 1990 160 0 3 chr5 71995870 71996183 -131089349 - AluJb SINE Alu 0 312 1 234 313 46 92 chr5 71996342 71996473 -131089059 + MIR3 SINE MIR 9 133 -75 21 0 0 0 chr5 71996676 71996697 -131088835 + AT_rich Low_complexity Low_complexity 1 21 0 2454 81 0 0 chr5 71998704 71999013 -131086519 - AluY SINE Alu -2 309 1 2271 113 0 3 chr5 71999511 71999811 -131085721 + AluSx SINE Alu 1 299 -13 1164 262 102 12 chr5 72001632 72001964 -131083568 + LTR16A LTR ERVL 88 449 -1 315 170 0 117 chr5 72001967 72002061 -131083471 + L1MC4 LINE L1 6621 6703 -1339 21 57 0 0 chr5 72002113 72002148 -131083384 + AT_rich Low_complexity Low_complexity 1 35 0 553 275 54 79 chr5 72002671 72002911 -131082621 + MLT1J LTR MaLR 198 431 -80 1933 138 7 3 chr5 72002920 72003210 -131082322 + AluSx SINE Alu 1 291 -21 900 175 45 23 chr5 72003213 72003390 -131082142 + AluJo/FRAM SINE Alu 129 309 -3 347 90 194 15 chr5 72003511 72003578 -131081954 + MER116 DNA Mariner 2 80 0 1081 89 0 0 chr5 72004275 72004410 -131081122 + AluSg SINE Alu 1 135 -175 41866 39 25 1 chr5 72004410 72010419 -131075113 + L1PA3 LINE L1 2 6154 -1 1288 132 0 0 chr5 72010433 72010623 -131074909 + AluSg SINE Alu 120 309 -3 1691 176 3 26 chr5 72010695 72011007 -131074525 + AluJb SINE Alu 1 305 -7 1771 218 57 14 chr5 72011883 72012323 -131073209 - MLT1C LTR MaLR -5 462 4 414 203 89 8 chr5 72013609 72013732 -131071800 + MER67C LTR ERV1 520 652 -58 31 0 0 0 chr5 72013965 72013996 -131071536 + AT_rich Low_complexity Low_complexity 1 31 0 705 274 79 0 chr5 72014108 72014298 -131071234 - MER63A DNA MER1_type -5 205 1 262 237 53 0 chr5 72014298 72014374 -131071158 - L1MC4a LINE L1 -1895 5913 5834 1875 161 0 13 chr5 72014426 72014724 -131070808 + AluSx SINE Alu 1 294 -18 22 0 0 0 chr5 72014775 72014797 -131070735 + AT_rich Low_complexity Low_complexity 1 22 0 220 184 0 0 chr5 72015297 72015335 -131070197 + CT-rich Low_complexity Low_complexity 1 38 0 2015 116 0 72 chr5 72015502 72015822 -131069710 - AluSx SINE Alu -15 297 1 315 271 0 0 chr5 72016670 72016740 -131068792 - MER45 DNA AcHobo -69 109 40 448 253 116 0 chr5 72016787 72016933 -131068599 + L2 LINE L2 2920 3082 -231 1859 221 20 0 chr5 72016949 72017297 -131068235 - MLT1A1 LTR MaLR 0 365 11 8042 201 78 17 chr5 72017308 72018939 -131066593 - MLT1A1-int LTR MaLR 0 1735 6 1736 191 30 35 chr5 72018944 72019311 -131066221 - MLT1A1 LTR MaLR 0 365 1 282 321 36 36 chr5 72019359 72019499 -131066033 + L2 LINE L2 3158 3297 -16 305 288 212 38 chr5 72019534 72019718 -131065814 + MIR SINE MIR 47 262 0 30 45 0 0 chr5 72019718 72019762 -131065770 + AT_rich Low_complexity Low_complexity 1 44 0 595 271 38 17 chr5 72020436 72020672 -131064860 - L1MC4a LINE L1 -348 5773 5533 1977 140 3 0 chr5 72020737 72021023 -131064509 - AluSx SINE Alu -25 287 1 2070 111 3 14 chr5 72022065 72022362 -131063170 + AluSx SINE Alu 1 294 -18 329 294 87 36 chr5 72022589 72022734 -131062798 + MIR SINE MIR 3 151 -63 2480 46 13 3 chr5 72023063 72023368 -131062164 + AluY SINE Alu 1 308 -3 23 0 0 0 chr5 72023569 72023592 -131061940 + AT_rich Low_complexity Low_complexity 1 23 0 1110 196 140 23 chr5 72025091 72025356 -131060176 - AluJo SINE Alu -6 296 1 1428 235 165 66 chr5 72025420 72025556 -131059976 - L1MC4 LINE L1 -11 8031 7910 306 0 0 0 chr5 72025556 72025590 -131059942 + (CA)n Simple_repeat Simple_repeat 2 35 0 1428 235 165 66 chr5 72025590 72025879 -131059653 - L1MC4 LINE L1 -132 7910 7651 2040 144 3 0 chr5 72025879 72026170 -131059362 - AluSx SINE Alu -16 296 5 1428 235 165 66 chr5 72026170 72026767 -131058765 - L1MC4 LINE L1 -391 7651 6907 23 0 0 0 chr5 72027009 72027032 -131058500 + AT_rich Low_complexity Low_complexity 1 23 0 705 245 223 44 chr5 72028160 72028662 -131056870 + MLT1G1 LTR MaLR 1 592 -3 222 314 113 16 chr5 72029038 72029162 -131056370 - MIR SINE MIR -50 212 77 11533 183 77 23 chr5 72030831 72031733 -131053799 - L1MCa LINE L1 -2346 4080 3229 1854 172 3 0 chr5 72031733 72032035 -131053497 + AluJo SINE Alu 1 303 -9 11533 183 77 23 chr5 72032035 72032580 -131052952 - L1MCa LINE L1 -3197 3229 2715 1947 109 52 4 chr5 72032580 72032847 -131052685 + AluSx SINE Alu 1 280 -32 1058 112 0 6 chr5 72032847 72033017 -131052515 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 11533 183 77 23 chr5 72033017 72033113 -131052419 - L1MCa LINE L1 -3711 2715 2626 2132 108 7 0 chr5 72033113 72033401 -131052131 + AluSx SINE Alu 1 290 -22 11533 183 77 23 chr5 72033401 72034358 -131051174 - L1MCa LINE L1 -3800 2626 1723 1422 193 7 51 chr5 72034358 72034653 -131050879 - AluJo SINE Alu -30 282 1 11533 183 77 23 chr5 72034653 72036007 -131049525 - L1MCa LINE L1 -4703 1723 12 3960 285 99 10 chr5 72036029 72037803 -131047729 + L2 LINE L2 609 2562 -752 294 298 57 35 chr5 72037929 72038070 -131047462 + L2 LINE L2 3118 3261 -52 14872 46 1 1 chr5 72038289 72040895 -131044637 - L1PA5 LINE L1 -6 6148 3542 1068 70 0 7 chr5 72040895 72041030 -131044502 - L1P LINE L1 -2110 4036 3901 * 19581 51 0 11 chr5 72041028 72041477 -131044055 + L1P LINE L1 1393 1845 -4301 3505 74 25 4 chr5 72041477 72041964 -131043568 - L1PA4 LINE L1 -2 6153 5657 19581 51 0 11 chr5 72041964 72044062 -131041470 + L1P LINE L1 1845 3914 -2232 3567 149 59 44 chr5 72044527 72045000 -131040532 - L1MA8 LINE L1 0 6291 5802 1805 148 4 4 chr5 72045000 72045277 -131040255 - AluJo SINE Alu -35 277 1 3567 149 59 44 chr5 72045277 72045527 -131040005 - L1MA8 LINE L1 -489 5802 5557 21 0 0 0 chr5 72045883 72045904 -131039628 + AT_rich Low_complexity Low_complexity 1 21 0 647 214 75 21 chr5 72046103 72046290 -131039242 - MIR SINE MIR 0 262 66 351 169 0 0 chr5 72046525 72046596 -131038936 + (CA)n Simple_repeat Simple_repeat 2 72 0 31 44 0 0 chr5 72047845 72047890 -131037642 + AT_rich Low_complexity Low_complexity 1 45 0 1093 235 57 86 chr5 72048047 72048605 -131036927 + MER34 LTR ERV1 1 542 0 1922 174 9 10 chr5 72048945 72049478 -131036054 + L1M4 LINE L1 4960 5493 -691 1668 179 13 0 chr5 72050423 72050730 -131034802 + L1M4 LINE L1 5478 5788 -396 967 126 11 63 chr5 72050731 72050905 -131034627 + AluSg/x SINE Alu 128 292 -20 243 61 0 0 chr5 72050920 72050953 -131034579 + (TAAAA)n Simple_repeat Simple_repeat 4 36 0 7589 194 17 9 chr5 72050960 72052577 -131032955 + L1MB7 LINE L1 3574 5203 -943 21 36 0 0 chr5 72052733 72052761 -131032771 + AT_rich Low_complexity Low_complexity 1 28 0 5702 130 11 3 chr5 72052764 72053708 -131031824 + L1PA16 LINE L1 5211 6160 -6 2248 149 17 24 chr5 72053744 72054086 -131031446 + L1MB7 LINE L1 5759 6099 -85 2317 111 13 34 chr5 72054086 72054466 -131031066 - THE1C LTR MaLR -3 372 1 2248 149 17 24 chr5 72054466 72054532 -131031000 + L1MB7 LINE L1 6099 6164 -20 2125 110 7 0 chr5 72054532 72054823 -131030709 - AluSp SINE Alu -20 293 1 2734 173 110 8 chr5 72055068 72055676 -131029856 - L1PBa LINE L1 -3858 3004 2334 5621 129 25 45 chr5 72055693 72056494 -131029038 + L1PB3 LINE L1 4702 5464 -690 2171 96 26 7 chr5 72056494 72056796 -131028736 + AluSc SINE Alu 2 309 0 5621 129 25 45 chr5 72056796 72057470 -131028062 + L1PB3 LINE L1 5464 6151 -3 21 0 0 0 chr5 72057472 72057493 -131028039 + AT_rich Low_complexity Low_complexity 1 21 0 2016 105 0 91 chr5 72059129 72059471 -131026061 - AluSp SINE Alu -2 311 1 2304 39 43 0 chr5 72059908 72060188 -131025344 - AluY SINE Alu -13 298 7 2125 101 0 42 chr5 72060194 72060501 -131025031 - AluSq SINE Alu -17 296 3 254 123 35 53 chr5 72060533 72060590 -131024942 + U2 snRNA snRNA 1 56 -132 212 202 10 81 chr5 72060616 72060715 -131024817 + A-rich Low_complexity Low_complexity 2 93 0 545 275 51 42 chr5 72060724 72061055 -131024477 + L1MEd LINE L1 924 1257 -4862 293 298 58 21 chr5 72061092 72061283 -131024249 + L1MEd LINE L1 2114 2311 -3818 21 57 0 0 chr5 72061356 72061391 -131024141 + AT_rich Low_complexity Low_complexity 1 35 0 813 192 0 0 chr5 72061439 72061590 -131023942 - FRAM SINE Alu -3 173 23 2165 76 0 0 chr5 72061685 72061961 -131023571 + AluY SINE Alu 25 300 -11 21 0 0 0 chr5 72061988 72062009 -131023523 + AT_rich Low_complexity Low_complexity 1 21 0 2151 130 10 0 chr5 72062091 72062392 -131023140 + AluSx SINE Alu 1 304 -8 470 252 8 8 chr5 72063086 72063205 -131022327 + MER34 LTR ERV1 1 119 -423 * 1606 182 56 76 chr5 72063190 72063566 -131021966 + MER39 LTR ERV1 216 581 -126 654 86 0 0 chr5 72063566 72063659 -131021873 + L1MA2 LINE L1 6212 6304 0 1606 182 56 76 chr5 72063659 72063782 -131021750 + MER39 LTR ERV1 581 705 -2 21 71 0 0 chr5 72064280 72064322 -131021210 + AT_rich Low_complexity Low_complexity 1 42 0 343 325 159 31 chr5 72064427 72064818 -131020714 + HAL1 LINE L1 407 847 -1660 329 319 155 58 chr5 72064891 72065233 -131020299 + L2 LINE L2 2898 3272 0 21 0 0 0 chr5 72065288 72065309 -131020223 + AT_rich Low_complexity Low_complexity 1 21 0 778 230 69 84 chr5 72065866 72066127 -131019405 - L2 LINE L2 -905 2409 2153 278 278 96 35 chr5 72066685 72066800 -131018732 + L2 LINE L2 2665 2786 -528 183 324 157 0 chr5 72066894 72066996 -131018536 + L2 LINE L2 2808 2925 -389 185 397 46 34 chr5 72067096 72067358 -131018174 + L2 LINE L2 2828 3092 -180 3727 184 29 21 chr5 72067741 72068514 -131017018 + L1MB8 LINE L1 5340 6118 -60 305 130 11 109 chr5 72068530 72068622 -131016910 + L1MB8 LINE L1 6091 6173 -5 458 241 124 68 chr5 72068901 72069166 -131016366 + L1ME LINE L1 5509 5788 -378 22 35 0 0 chr5 72069501 72069530 -131016002 + AT_rich Low_complexity Low_complexity 1 29 0 471 256 70 0 chr5 72069612 72069768 -131015764 + L1MD3 LINE L1 7811 7977 -18 2153 102 10 10 chr5 72069778 72070071 -131015461 - AluSx SINE Alu -19 293 1 32 43 0 0 chr5 72070071 72070117 -131015415 + AT_rich Low_complexity Low_complexity 1 46 0 536 192 40 0 chr5 72070227 72070326 -131015206 + FLAM_C SINE Alu 1 103 -40 183 129 0 0 chr5 72070365 72070396 -131015136 + (CA)n Simple_repeat Simple_repeat 2 32 0 401 174 0 0 chr5 72070401 72070470 -131015062 + AluJ/FRAM SINE Alu 228 296 -6 358 341 72 65 chr5 72070573 72070699 -131014833 - L3b LINE CR1 -8 1575 1451 1950 110 3 72 chr5 72070699 72071018 -131014514 + AluSx SINE Alu 1 297 -15 358 341 72 65 chr5 72071018 72071056 -131014476 - L3b LINE CR1 -132 1451 1415 2267 115 27 56 chr5 72071056 72071244 -131014288 - THE1B LTR MaLR 0 364 191 2338 92 0 0 chr5 72071244 72071539 -131013993 - AluY SINE Alu -16 295 1 2267 115 27 56 chr5 72071539 72071725 -131013807 - THE1B LTR MaLR -173 191 1 910 232 128 53 chr5 72071733 72072052 -131013480 + MER2 DNA MER2_type 2 344 0 358 341 72 65 chr5 72072052 72072323 -131013209 - L3b LINE CR1 -174 1409 1127 2037 103 7 3 chr5 72072391 72072673 -131012859 + AluSx SINE Alu 1 283 -29 2089 243 61 49 chr5 72073141 72073954 -131011578 + L1MC4 LINE L1 239 1040 -6936 1877 147 7 13 chr5 72073954 72074253 -131011279 - AluSx SINE Alu -15 297 1 2089 243 61 49 chr5 72074253 72074332 -131011200 + L1MC4 LINE L1 1040 7819 -157 3441 259 87 19 chr5 72074364 72075667 -131009865 + L1MEc LINE L1 36 1426 -4970 3134 250 56 54 chr5 72075672 72076824 -131008708 + L1MEc LINE L1 2660 3807 -2408 3966 70 8 0 chr5 72076824 72077342 -131008190 - L1PA10 LINE L1 -9 6159 5638 3134 250 56 54 chr5 72077342 72077482 -131008050 + L1MEc LINE L1 3807 3945 -2270 2062 137 0 13 chr5 72077482 72077795 -131007737 + AluJb SINE Alu 1 309 -3 3134 250 56 54 chr5 72077795 72078135 -131007397 + L1MEc LINE L1 3945 4283 -1932 186 43 0 0 chr5 72078135 72078158 -131007374 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3134 250 56 54 chr5 72078158 72078257 -131007275 + L1MEc LINE L1 4283 4380 -1835 1677 116 104 0 chr5 72078257 72078508 -131007024 + AluSq SINE Alu 3 279 -34 3134 250 56 54 chr5 72078508 72078795 -131006737 + L1MEc LINE L1 4380 4625 -1590 430 216 0 23 chr5 72078806 72078894 -131006638 - MLT1E LTR MaLR -507 86 1 633 274 61 10 chr5 72078960 72079157 -131006375 + MIR SINE MIR 28 234 -28 2033 136 0 13 chr5 72079473 72079781 -131005751 - AluSx SINE Alu -2 310 7 246 163 0 20 chr5 72079783 72079832 -131005700 - MER94 DNA DNA -73 61 14 243 109 0 43 chr5 72079975 72080021 -131005511 + AluSq SINE Alu 257 300 -2 296 270 10 20 chr5 72080021 72080121 -131005411 + L1M4 LINE L1 3823 3921 -2225 1936 136 24 35 chr5 72080757 72081131 -131004401 + L1MB8 LINE L1 5804 6173 -5 23 0 0 0 chr5 72081421 72081444 -131004088 + AT_rich Low_complexity Low_complexity 1 23 0 483 165 61 26 chr5 72081510 72081625 -131003907 + L1MA8 LINE L1 6166 6284 -7 23 54 0 0 chr5 72081970 72082007 -131003525 + AT_rich Low_complexity Low_complexity 1 37 0 253 184 68 10 chr5 72082199 72082302 -131003230 + (TA)n Simple_repeat Simple_repeat 2 110 0 2169 66 35 7 chr5 72082610 72082898 -131002634 - AluY SINE Alu -15 296 1 2241 86 0 22 chr5 72083480 72083795 -131001737 + AluSg SINE Alu 1 308 -2 332 301 154 6 chr5 72084856 72085012 -131000520 + MIR SINE MIR 42 220 -42 21 36 0 0 chr5 72086187 72086215 -130999317 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 72087099 72087121 -130998411 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 72087299 72087322 -130998210 + AT_rich Low_complexity Low_complexity 1 23 0 1533 209 52 28 chr5 72088059 72088446 -130997086 + MSTD LTR MaLR 1 396 0 1453 226 174 33 chr5 72088630 72089143 -130996389 + MLT1E LTR MaLR 3 587 -6 2141 127 7 7 chr5 72089407 72089714 -130995818 + AluSq SINE Alu 1 307 -6 1306 122 10 29 chr5 72089774 72089979 -130995553 + AluSq SINE Alu 112 312 -1 29 47 0 0 chr5 72090146 72090189 -130995343 + AT_rich Low_complexity Low_complexity 1 43 0 897 167 31 70 chr5 72090608 72090836 -130994696 + L2 LINE L2 3095 3313 0 380 175 39 10 chr5 72090897 72091000 -130994532 + L1ME4a LINE L1 6004 6109 -12 2086 94 70 0 chr5 72091884 72092171 -130993361 - AluSc SINE Alu -2 307 1 384 280 67 67 chr5 72092537 72092558 -130992974 - L3 LINE CR1 -144 1433 1413 2269 107 0 0 chr5 72092558 72092856 -130992676 - AluSg SINE Alu -12 298 1 384 280 67 67 chr5 72092856 72093027 -130992505 - L3 LINE CR1 -163 1414 1241 877 89 0 15 chr5 72093189 72093324 -130992208 - FLAM_C SINE Alu 0 133 1 639 320 51 20 chr5 72093337 72093590 -130991942 + L2 LINE L2 2599 2859 -455 307 300 35 125 chr5 72093584 72093871 -130991661 + L2 LINE L2 2817 3077 -195 * 282 287 58 0 chr5 72094673 72094760 -130990772 - MIR SINE MIR -11 251 160 521 288 172 19 chr5 72094818 72095138 -130990394 + MLT1J2 LTR MaLR 82 450 0 259 265 157 20 chr5 72095150 72095252 -130990280 - MIR SINE MIR -61 147 32 218 200 40 20 chr5 72095733 72095783 -130989749 + MIR3 SINE MIR 110 160 -48 274 260 0 125 chr5 72095951 72096047 -130989485 + L3 LINE CR1 1491 1574 -3 204 314 127 0 chr5 72096600 72096718 -130988814 - MIR SINE MIR -30 232 100 1099 294 52 60 chr5 72096801 72096951 -130988581 - L2 LINE L2 0 3313 3163 2224 101 3 0 chr5 72096951 72097239 -130988293 + AluSg SINE Alu 6 294 -16 1099 294 52 60 chr5 72097239 72097602 -130987930 - L2 LINE L2 -150 3163 2804 2083 280 62 14 chr5 72097656 72098306 -130987226 + L2 LINE L2 38 718 -2596 1627 183 89 18 chr5 72098325 72098774 -130986758 - Charlie4a DNA MER1_type -22 486 6 4421 244 158 21 chr5 72098779 72100340 -130985192 + L2 LINE L2 697 2470 -844 775 283 274 3 chr5 72100346 72100759 -130984773 + L2 LINE L2 2790 3313 0 371 255 132 40 chr5 72100854 72100907 -130984625 + HAL1 LINE L1 972 1019 -1488 2564 31 3 0 chr5 72100907 72101201 -130984331 + AluY SINE Alu 1 295 -16 371 255 132 40 chr5 72101201 72101594 -130983938 + HAL1 LINE L1 1019 1459 -1048 22 56 0 0 chr5 72101594 72101630 -130983902 + AT_rich Low_complexity Low_complexity 1 36 0 262 185 0 31 chr5 72101766 72101831 -130983701 + L1P LINE L1 1825 1887 -4259 652 88 22 0 chr5 72102513 72102604 -130982928 + AluSg/x SINE Alu 209 301 -11 400 176 19 46 chr5 72102662 72102770 -130982762 + L1MC4a LINE L1 7197 7301 -507 194 362 68 36 chr5 72102963 72103242 -130982290 + L2 LINE L2 2214 2501 -813 21 0 0 0 chr5 72103248 72103269 -130982263 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 72103656 72103680 -130981852 + AT_rich Low_complexity Low_complexity 1 24 0 676 195 0 8 chr5 72104249 72104372 -130981160 - FLAM_C SINE Alu -21 122 1 27 0 0 0 chr5 72104827 72104854 -130980678 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr5 72105570 72105605 -130979927 + AT_rich Low_complexity Low_complexity 1 35 0 1572 97 0 9 chr5 72105718 72105935 -130979597 + AluSg/x SINE Alu 95 309 -1 2458 144 29 120 chr5 72105949 72106533 -130978999 + L1MB8 LINE L1 5542 6053 -125 192 77 0 0 chr5 72106533 72106559 -130978973 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 2458 144 29 120 chr5 72106559 72106674 -130978858 + L1MB8 LINE L1 6053 6177 -1 195 100 0 0 chr5 72108945 72108975 -130976557 + (A)n Simple_repeat Simple_repeat 1 30 0 214 347 61 74 chr5 72109573 72109870 -130975662 - L2 LINE L2 -64 3208 2916 1557 249 143 13 chr5 72110051 72110576 -130974956 + MLT1E LTR MaLR 1 593 0 2160 90 0 23 chr5 72110762 72111062 -130974470 - AluSg SINE Alu -17 293 1 2179 130 3 0 chr5 72111995 72112302 -130973230 + AluSx SINE Alu 1 308 -4 286 217 94 38 chr5 72112591 72112697 -130972835 + MIR SINE MIR 98 209 -53 32 0 0 0 chr5 72115580 72115612 -130969920 + AT_rich Low_complexity Low_complexity 1 32 0 234 279 16 0 chr5 72116670 72116731 -130968801 + GA-rich Low_complexity Low_complexity 3 64 0 255 217 0 0 chr5 72117723 72117783 -130967749 + (TATG)n Simple_repeat Simple_repeat 1 60 0 386 224 26 35 chr5 72118268 72118384 -130967148 - L1MC5 LINE L1 -50 7911 7797 325 236 210 6 chr5 72118406 72118563 -130966969 - L1MC5 LINE L1 -238 7723 7535 246 202 48 115 chr5 72118583 72118687 -130966845 - L1ME3A LINE L1 -5 6165 6069 27 81 0 0 chr5 72118703 72118765 -130966767 + AT_rich Low_complexity Low_complexity 1 62 0 589 150 62 0 chr5 72118765 72118878 -130966654 - AluJo SINE Alu -140 172 53 3726 110 217 123 chr5 72118879 72120149 -130965383 - pTR5 LTR ERV1 0 2438 743 265 211 18 0 chr5 72120149 72120206 -130965326 - AluS SINE Alu -242 58 1 2353 67 0 0 chr5 72120276 72120560 -130964972 - AluY SINE Alu -9 302 19 2085 139 47 35 chr5 72120960 72121504 -130964028 - MLT2A2 LTR ERVL 0 554 3 26791 77 27 24 chr5 72121506 72125365 -130960167 - HERVL-A2 LTR ERVL 0 5654 1784 1318 186 10 93 chr5 72125911 72126222 -130959310 + AluJo SINE Alu 11 295 -17 2125 104 45 0 chr5 72126245 72126532 -130959000 - AluSx SINE Alu -12 300 1 523 304 136 4 chr5 72126630 72126910 -130958622 + L1M4 LINE L1 5087 5403 -743 1644 90 0 38 chr5 72126948 72127214 -130958318 + L1MA3 LINE L1 5790 6045 -260 759 126 67 0 chr5 72127230 72127349 -130958183 + FLAM_C SINE Alu 1 127 -16 35 0 0 22 chr5 72127349 72127368 -130958164 + AT_rich Low_complexity Low_complexity 1 19 -26 1348 134 0 53 chr5 72127368 72127630 -130957902 + L1MA2 LINE L1 6057 6304 0 35 0 0 22 chr5 72127630 72127656 -130957876 + AT_rich Low_complexity Low_complexity 19 45 0 392 352 26 34 chr5 72127784 72128048 -130957484 + HAL1b LINE L1 91 352 -996 2158 127 3 7 chr5 72128427 72128727 -130956805 + AluSx SINE Alu 1 299 -13 273 29 0 0 chr5 72128728 72128762 -130956770 + (CA)n Simple_repeat Simple_repeat 1 34 0 437 281 128 36 chr5 72128802 72129051 -130956481 + L1M4 LINE L1 2266 2537 -3609 961 183 0 6 chr5 72129149 72129313 -130956219 + FAM SINE Alu 1 163 -12 592 169 76 0 chr5 72129572 72129690 -130955842 + MER3 DNA MER1_type 2 128 -81 465 119 22 189 chr5 72129678 72129863 -130955669 + MER3 DNA MER1_type 2471 2624 0 * 1045 239 168 20 chr5 72129879 72130132 -130955400 + L1ME4a LINE L1 5329 5543 -578 1844 158 14 4 chr5 72130132 72130441 -130955091 + AluJb SINE Alu 1 312 0 1045 239 168 20 chr5 72130441 72130733 -130954799 + L1ME4a LINE L1 5543 5956 -165 354 205 120 0 chr5 72130817 72130934 -130954598 + L1ME4a LINE L1 5991 6121 0 2211 90 0 23 chr5 72130934 72131244 -130954288 + AluSg1 SINE Alu 1 303 -6 2259 113 0 3 chr5 72131248 72131549 -130953983 + AluSx SINE Alu 1 300 -12 556 260 64 56 chr5 72131602 72131852 -130953680 - MLT1E LTR MaLR -337 256 5 805 203 0 0 chr5 72131894 72132032 -130953500 + FRAM SINE Alu 9 146 -30 201 74 0 0 chr5 72132032 72132059 -130953473 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 367 250 28 21 chr5 72132083 72132227 -130953305 + L1MEc LINE L1 1863 2007 -4389 214 177 48 0 chr5 72132369 72132431 -130953101 + (TA)n Simple_repeat Simple_repeat 2 66 0 2832 148 72 96 chr5 72132464 72132785 -130952747 - L1MDa LINE L1 -4157 2383 2056 1397 155 87 81 chr5 72132785 72133095 -130952437 - AluJo SINE Alu 0 312 1 2832 148 72 96 chr5 72133095 72133188 -130952344 - L1MDa LINE L1 -4484 2056 1962 532 168 0 134 chr5 72133188 72133337 -130952195 - FLAM_C SINE Alu -4 129 1 2832 148 72 96 chr5 72133337 72133820 -130951712 - L1MDa LINE L1 -4578 1962 1506 7605 8 0 0 chr5 72133831 72134729 -130950803 - L1HS LINE L1 -1 6154 5257 840 168 98 59 chr5 72134726 72134813 -130950719 - L1MDa LINE L1 -5034 1506 1424 * 2149 113 0 38 chr5 72134813 72135132 -130950400 - AluSc SINE Alu -2 307 1 840 168 98 59 chr5 72135132 72135330 -130950202 - L1MDa LINE L1 -5116 1424 1210 2164 130 3 0 chr5 72135333 72135641 -130949891 - AluSx SINE Alu -3 309 1 2941 265 123 14 chr5 72135641 72136677 -130948855 - L1MDa LINE L1 -5388 1152 4 584 159 145 69 chr5 72136778 72136923 -130948609 - FRAM SINE Alu -9 157 2 2055 111 32 0 chr5 72136959 72137261 -130948271 - AluSx SINE Alu 0 311 1 2097 105 24 7 chr5 72137273 72137568 -130947964 - AluSx SINE Alu -12 300 1 275 247 41 47 chr5 72137573 72137743 -130947789 - L1M4 LINE L1 -825 5321 5153 24 0 0 0 chr5 72137753 72137777 -130947755 + AT_rich Low_complexity Low_complexity 1 24 0 2368 82 0 3 chr5 72137824 72138118 -130947414 - AluSg1 SINE Alu -16 293 1 21 0 0 0 chr5 72138121 72138142 -130947390 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 72138311 72138333 -130947199 + AT_rich Low_complexity Low_complexity 1 22 0 2101 125 3 7 chr5 72138336 72138640 -130946892 + AluSq SINE Alu 1 303 -10 180 0 0 0 chr5 72139095 72139115 -130946417 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 750 202 47 67 chr5 72139120 72139313 -130946219 - AluJo SINE Alu -37 275 87 1799 177 0 26 chr5 72139514 72139824 -130945708 + AluJb SINE Alu 2 303 -9 296 282 102 53 chr5 72139862 72140107 -130945425 - L1MEd LINE L1 -4862 1257 1001 1306 179 130 0 chr5 72140266 72140528 -130945004 + AluJo SINE Alu 3 298 -14 915 131 0 0 chr5 72140529 72140666 -130944866 + AluJb SINE Alu 1 137 -175 2077 134 0 3 chr5 72140668 72140960 -130944572 + AluSx SINE Alu 5 295 -17 666 337 54 9 chr5 72141097 72141447 -130944085 - MLT1L LTR MaLR -6 609 244 2555 222 59 32 chr5 72141816 72142592 -130942940 - L1MC4a LINE L1 -86 7722 6926 1044 208 61 36 chr5 72142593 72142665 -130942867 + L1M4 LINE L1 4965 5034 -1112 2240 105 0 10 chr5 72142665 72142969 -130942563 + AluSx SINE Alu 1 301 -11 1044 208 61 36 chr5 72142969 72143256 -130942276 + L1M4 LINE L1 5034 5333 -813 1870 179 21 10 chr5 72143454 72143839 -130941693 - L1MC2 LINE L1 -340 6284 5896 11167 153 64 35 chr5 72143841 72144520 -130941012 + Tigger1 DNA MER2_type 2 660 -1758 2255 137 42 33 chr5 72144520 72144657 -130940875 + MSTC LTR MaLR 1 135 -293 2377 94 0 3 chr5 72144657 72144966 -130940566 + AluSq SINE Alu 3 310 -3 2255 137 42 33 chr5 72144966 72145252 -130940280 + MSTC LTR MaLR 135 428 0 11167 153 64 35 chr5 72145252 72146921 -130938611 + Tigger1 DNA MER2_type 660 2418 0 1312 183 56 12 chr5 72146924 72147412 -130938120 - L1MC2 LINE L1 -731 5893 5347 * 3960 221 126 60 chr5 72147400 72148410 -130937122 - L1MC2 LINE L1 -1413 5013 4071 2342 82 0 22 chr5 72148410 72148727 -130936805 - AluSg SINE Alu 0 310 1 3960 221 126 60 chr5 72148727 72149367 -130936165 - L1MC2 LINE L1 -2355 4071 3224 2352 70 7 7 chr5 72149367 72149665 -130935867 - AluY SINE Alu -13 298 1 3960 221 126 60 chr5 72149665 72149866 -130935666 - L1MC2 LINE L1 -3202 3224 3038 505 212 170 32 chr5 72149880 72149989 -130935543 - L1MC2 LINE L1 -3730 2696 2603 1297 216 76 36 chr5 72149989 72150345 -130935187 - MLT1A2 LTR MaLR -4 370 1 505 212 170 32 chr5 72150345 72150583 -130934949 - L1MC2 LINE L1 -3823 2603 2264 2261 101 7 3 chr5 72151108 72151405 -130934127 - AluSx SINE Alu -14 298 1 21 36 0 0 chr5 72152302 72152330 -130933202 + AT_rich Low_complexity Low_complexity 1 28 0 230 387 47 0 chr5 72153623 72153729 -130931803 - MIR SINE MIR -68 140 30 2482 151 34 5 chr5 72154177 72154593 -130930939 + MSTA LTR MaLR 1 428 0 21 36 0 0 chr5 72155493 72155521 -130930011 + AT_rich Low_complexity Low_complexity 1 28 0 2127 112 0 3 chr5 72155770 72156064 -130929468 - AluSq SINE Alu -20 293 1 1194 329 79 55 chr5 72156447 72156588 -130928944 - L3 LINE CR1 -254 1323 1187 1752 147 30 33 chr5 72156588 72156888 -130928644 - AluJo SINE Alu -9 303 5 1194 329 79 55 chr5 72156888 72157624 -130927908 - L3 LINE CR1 -390 1187 425 1399 246 146 56 chr5 72157843 72158258 -130927274 + HAL1b LINE L1 208 584 -764 2126 94 0 32 chr5 72158258 72158567 -130926965 + AluY SINE Alu 3 301 -10 1514 110 10 110 chr5 72158567 72158856 -130926676 + AluSq SINE Alu 36 296 -17 1399 246 146 56 chr5 72158856 72159239 -130926293 + HAL1b LINE L1 584 931 -417 1938 147 3 26 chr5 72159239 72159546 -130925986 + AluSx SINE Alu 1 300 -12 1399 246 146 56 chr5 72159546 72159744 -130925788 + HAL1b LINE L1 931 1296 -52 1224 186 106 75 chr5 72159768 72160144 -130925388 + MLT1B LTR MaLR 1 388 -2 710 182 8 0 chr5 72160841 72160962 -130924570 + FLAM_A SINE Alu 1 122 -11 2049 130 6 19 chr5 72160973 72161288 -130924244 + AluSx SINE Alu 1 311 -1 504 0 0 0 chr5 72161661 72161717 -130923815 + (TA)n Simple_repeat Simple_repeat 2 57 0 1768 136 0 44 chr5 72162108 72162403 -130923129 + AluSx SINE Alu 1 282 -30 2378 73 10 0 chr5 72163645 72163948 -130921584 - AluY SINE Alu -5 306 1 2466 84 0 0 chr5 72163956 72164265 -130921267 - AluSg SINE Alu -1 309 1 606 319 48 28 chr5 72164448 72164699 -130920833 - L2 LINE L2 -171 3142 2887 296 192 64 0 chr5 72164781 72164859 -130920673 + L1MEc LINE L1 2029 2111 -4285 1369 144 0 5 chr5 72164869 72165100 -130920432 + AluJb SINE Alu 81 310 0 672 229 14 7 chr5 72165173 72165313 -130920219 + FRAM SINE Alu 1 141 -35 4933 214 71 100 chr5 72165381 72165671 -130919861 + L1M4 LINE L1 2773 3070 -3076 2477 68 0 0 chr5 72165671 72165964 -130919568 - AluSc SINE Alu -16 293 1 4933 214 71 100 chr5 72165964 72166798 -130918734 + L1M4 LINE L1 3070 3927 -2219 2341 90 3 0 chr5 72166798 72167099 -130918433 + AluSp SINE Alu 9 310 -3 4933 214 71 100 chr5 72167099 72167240 -130918292 + L1M4 LINE L1 3927 4071 -2075 1860 121 40 4 chr5 72167240 72167549 -130917983 + AluSx SINE Alu 1 319 0 4933 214 71 100 chr5 72167549 72167923 -130917609 + L1M4 LINE L1 4071 4454 -1692 2267 92 0 19 chr5 72167923 72168239 -130917293 + AluYa5 SINE Alu 1 310 -1 4933 214 71 100 chr5 72168239 72169098 -130916434 + L1M4 LINE L1 4454 5202 -944 1407 180 7 54 chr5 72169098 72169392 -130916140 + AluJb SINE Alu 1 280 -32 1569 241 129 43 chr5 72169432 72169989 -130915543 + MER77 LTR ERV1 1 605 0 931 281 57 52 chr5 72170049 72170415 -130915117 + MER77-int LTR ERV1 57 424 -3767 1554 176 17 47 chr5 72170494 72170795 -130914737 + AluJo SINE Alu 1 292 -20 697 274 103 32 chr5 72171012 72171264 -130914268 + MSTD LTR MaLR 38 307 -89 311 270 14 0 chr5 72171356 72171430 -130914102 - MER77 LTR ERV1 -167 438 364 2179 77 18 3 chr5 72171476 72171762 -130913770 - AluY SINE Alu -21 290 1 323 164 0 0 chr5 72171782 72171837 -130913695 + MSTD LTR MaLR 342 396 0 1902 205 40 11 chr5 72171840 72172284 -130913248 - L1MB8 LINE L1 -278 5900 5444 268 283 81 25 chr5 72172304 72172502 -130913030 - HAL1 LINE L1 -1487 1020 812 725 221 39 0 chr5 72172634 72172788 -130912744 - MLT-int LTR MaLR -1196 539 380 385 363 94 27 chr5 72172809 72173140 -130912392 - HAL1 LINE L1 -1897 610 258 4611 232 158 30 chr5 72173345 72174556 -130910976 - MLT1A1-int LTR MaLR -14 1721 273 3358 196 79 52 chr5 72174556 72174971 -130910561 + MER21B LTR ERV1 1 404 -459 1843 143 6 54 chr5 72174971 72175285 -130910247 - AluJb SINE Alu -13 299 1 3358 196 79 52 chr5 72175285 72175709 -130909823 + MER21B LTR ERV1 404 862 -1 4611 232 158 30 chr5 72175709 72176021 -130909511 - MLT1A1-int LTR MaLR -1462 273 2 1617 173 107 21 chr5 72176023 72176359 -130909173 - MLT1A1 LTR MaLR 0 365 1 2199 119 0 0 chr5 72176519 72176812 -130908720 + AluSg SINE Alu 1 293 -17 1617 148 4 0 chr5 72177145 72177381 -130908151 - AluSq SINE Alu -31 282 46 429 307 17 45 chr5 72177742 72178018 -130907514 - L1MC4a LINE L1 -297 5824 5564 607 264 150 32 chr5 72178299 72178519 -130907013 - MLT1A1 LTR MaLR -119 246 1 3753 134 44 10 chr5 72178519 72179204 -130906328 + L1MB2 LINE L1 5463 6170 -1 2237 189 88 21 chr5 72179212 72179487 -130906045 + L1MDa LINE L1 1471 1726 -4814 513 0 0 0 chr5 72179487 72179544 -130905988 + (CA)n Simple_repeat Simple_repeat 1 57 0 2237 189 88 21 chr5 72179544 72179849 -130905683 + L1MDa LINE L1 1726 2090 -4450 820 224 113 29 chr5 72179853 72180099 -130905433 + MLT1E LTR MaLR 320 582 -44 487 101 0 0 chr5 72180399 72180468 -130905064 - AluSq SINE Alu -243 69 1 220 344 61 56 chr5 72180561 72180699 -130904833 - L2 LINE L2 -938 2376 2235 2256 143 34 8 chr5 72180699 72181077 -130904455 + MLT1B LTR MaLR 1 388 -2 220 344 61 56 chr5 72181077 72181118 -130904414 - L2 LINE L2 -1079 2235 2196 2157 121 7 0 chr5 72181273 72181571 -130903961 + AluSx SINE Alu 1 300 -12 262 193 133 12 chr5 72181641 72181724 -130903808 + L1ME LINE L1 5422 5514 -656 184 321 109 49 chr5 72181735 72181830 -130903702 - L2 LINE L2 -1085 2229 2141 2279 101 0 0 chr5 72181830 72182126 -130903406 - AluY SINE Alu -15 296 1 184 321 109 49 chr5 72182126 72182214 -130903318 - L2 LINE L2 -1173 2141 2035 14101 130 55 9 chr5 72182292 72184077 -130901455 - Tigger1 DNA MER2_type 0 2418 500 1802 130 3 35 chr5 72184077 72184362 -130901170 + AluSc SINE Alu 29 304 -5 14101 130 55 9 chr5 72184362 72184887 -130900645 - Tigger1 DNA MER2_type -1918 500 1 2005 122 0 27 chr5 72185139 72185435 -130900097 + AluJb SINE Alu 18 305 -7 1255 174 9 5 chr5 72186123 72186342 -130899190 - AluSg/x SINE Alu -11 299 80 1115 91 203 0 chr5 72187425 72187612 -130897920 + MER30 DNA MER1_type 6 230 0 476 361 138 35 chr5 72187694 72188302 -130897230 + L2 LINE L2 2329 3036 -236 2085 78 3 48 chr5 72188302 72188597 -130896935 - AluSc SINE Alu -15 294 13 476 361 138 35 chr5 72188597 72188761 -130896771 + L2 LINE L2 3036 3182 -90 1918 283 100 24 chr5 72189120 72190127 -130895405 - L2 LINE L2 0 3313 2215 511 211 105 0 chr5 72190132 72190227 -130895305 + Tigger3(Golem) DNA MER2_type 4 108 -2921 3014 126 197 13 chr5 72190227 72190350 -130895182 + Tigger3(Golem) DNA MER2_type 2285 2384 -645 1680 183 3 16 chr5 72190350 72190662 -130894870 + AluJo SINE Alu 2 309 -3 3014 126 197 13 chr5 72190662 72191167 -130894365 + Tigger3(Golem) DNA MER2_type 2384 3029 0 621 249 192 8 chr5 72191167 72191428 -130894104 - L2 LINE L2 -1102 2212 1904 1004 283 103 57 chr5 72191475 72191949 -130893583 + MLT1G1 LTR MaLR 86 581 -14 524 315 0 7 chr5 72191969 72192112 -130893420 - L2 LINE L2 -1401 1913 1772 702 199 5 84 chr5 72192115 72192306 -130893226 + AluJb SINE Alu 135 310 -2 1713 284 104 29 chr5 72192329 72192985 -130892547 - L2 LINE L2 -1539 1775 1071 904 228 120 4 chr5 72192987 72193237 -130892295 - L2 LINE L2 -2585 729 451 725 256 99 58 chr5 72193339 72193506 -130892026 + L1ME3A LINE L1 4491 4650 -1496 2823 0 0 0 chr5 72193506 72193807 -130891725 + AluYa5 SINE Alu 1 301 -10 725 256 99 58 chr5 72193807 72194033 -130891499 + L1ME3A LINE L1 4650 4900 -1246 22 70 0 0 chr5 72194040 72194083 -130891449 + AT_rich Low_complexity Low_complexity 1 43 0 337 252 33 60 chr5 72194327 72194478 -130891054 + L1ME3A LINE L1 5176 5322 -824 243 294 138 6 chr5 72194540 72194700 -130890832 + L1ME3A LINE L1 5988 6168 -2 * 275 294 141 50 chr5 72194672 72195033 -130890499 + L1ME LINE L1 5279 5672 -498 785 284 47 0 chr5 72195079 72195311 -130890221 + MIR SINE MIR 18 260 -2 440 243 57 14 chr5 72195609 72195749 -130889783 + MLT1A1 LTR MaLR 167 312 -53 429 275 140 23 chr5 72196008 72196179 -130889353 - L2 LINE L2 0 3313 3123 244 191 0 0 chr5 72196297 72196339 -130889193 + (CAT)n Simple_repeat Simple_repeat 1 42 0 228 182 0 0 chr5 72196726 72196770 -130888762 + L1MB2 LINE L1 6115 6158 -13 255 330 63 65 chr5 72198418 72198454 -130887078 + L2 LINE L2 2723 2758 -514 2238 66 26 20 chr5 72198454 72198758 -130886774 - AluSc SINE Alu -3 306 1 255 330 63 65 chr5 72198758 72199097 -130886435 + L2 LINE L2 2758 3105 -167 252 347 0 0 chr5 72199125 72199200 -130886332 + Tigger8 DNA MER2_type 1 75 -591 224 324 28 42 chr5 72199257 72199399 -130886133 + L2 LINE L2 3118 3257 -56 397 264 155 55 chr5 72199514 72199660 -130885872 + Tigger8 DNA MER2_type 276 406 -260 2271 95 0 20 chr5 72199660 72199964 -130885568 + AluSg SINE Alu 1 298 -12 397 264 155 55 chr5 72199964 72200146 -130885386 + Tigger8 DNA MER2_type 406 637 -29 785 309 113 18 chr5 72200283 72200717 -130884815 - MLT1J LTR MaLR 0 511 37 356 205 24 16 chr5 72200829 72200956 -130884576 + CT-rich Low_complexity Low_complexity 3 130 0 243 146 0 0 chr5 72201305 72201346 -130884186 + (T)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr5 72201784 72201805 -130883727 + AT_rich Low_complexity Low_complexity 1 21 0 1115 133 123 5 chr5 72202158 72202369 -130883163 + MER46A DNA MER2_type 1 236 0 293 298 56 9 chr5 72202370 72202627 -130882905 - MIR SINE MIR 0 262 23 616 269 54 11 chr5 72202634 72202820 -130882712 - L2 LINE L2 -578 2736 2543 29 47 0 0 chr5 72202865 72202908 -130882624 + AT_rich Low_complexity Low_complexity 1 43 0 349 260 195 13 chr5 72203103 72203257 -130882275 + MIR SINE MIR 69 250 -12 25 31 0 0 chr5 72203912 72203944 -130881588 + AT_rich Low_complexity Low_complexity 1 32 0 955 173 67 112 chr5 72204693 72205006 -130880526 - MLT1A2 LTR MaLR -1 373 75 627 281 137 42 chr5 72205073 72205386 -130880146 + MARNA DNA Mariner 169 511 -75 234 262 62 21 chr5 72206447 72206592 -130878940 - L1MEc LINE L1 -4730 1666 1516 733 332 145 25 chr5 72206796 72207393 -130878139 + L2 LINE L2 2375 3051 -221 183 48 48 24 chr5 72207413 72207455 -130878077 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1211 141 7 131 chr5 72207472 72207591 -130877941 - AluJb SINE Alu -58 254 190 441 0 0 0 chr5 72207591 72207640 -130877892 + (TA)n Simple_repeat Simple_repeat 1 49 0 1211 141 7 131 chr5 72207640 72207810 -130877722 - AluJb SINE Alu -122 190 1 23 0 0 0 chr5 72208488 72208511 -130877021 + AT_rich Low_complexity Low_complexity 1 23 0 2824 13 0 0 chr5 72208585 72208894 -130876638 - AluYb8 SINE Alu -6 312 4 210 125 150 0 chr5 72210030 72210070 -130875462 - L2 LINE L2 -4 3268 3223 1138 158 98 10 chr5 72210102 72210399 -130875133 + MER33 DNA MER1_type 1 323 -1 2142 120 10 3 chr5 72210512 72210813 -130874719 - AluSx SINE Alu -9 303 1 6228 114 71 2 chr5 72211854 72212852 -130872680 - L1MC1 LINE L1 -1 6332 5266 344 250 10 10 chr5 72212852 72212948 -130872584 - L1MC4 LINE L1 -1339 6703 6608 277 158 289 0 chr5 72212948 72213024 -130872508 - L1M4 LINE L1 -864 5282 5185 2062 128 10 3 chr5 72213027 72213332 -130872200 - AluSx SINE Alu -5 307 1 337 347 115 26 chr5 72214335 72214641 -130870891 + L2 LINE L2 2658 3046 -226 2085 135 0 0 chr5 72214641 72214930 -130870602 - AluSx SINE Alu -23 289 1 337 347 115 26 chr5 72214930 72215000 -130870532 + L2 LINE L2 3046 3108 -164 1456 216 7 7 chr5 72215420 72215712 -130869820 + AluJo SINE Alu 1 292 -20 498 235 155 45 chr5 72216588 72216788 -130868744 - MIR SINE MIR 0 262 41 1368 216 20 30 chr5 72217783 72218080 -130867452 + AluJo SINE Alu 1 294 -18 790 188 0 0 chr5 72218691 72218819 -130866713 + FLAM_C SINE Alu 1 128 -5 473 352 21 0 chr5 72220501 72220646 -130864886 + MIR3 SINE MIR 19 166 -42 313 214 152 76 chr5 72220873 72221018 -130864514 - MIR SINE MIR -105 157 2 21 0 0 0 chr5 72221771 72221792 -130863740 + AT_rich Low_complexity Low_complexity 1 21 0 1589 159 84 0 chr5 72221792 72222088 -130863444 + MER44D DNA MER2_type 1 591 -18 292 58 0 232 chr5 72223509 72223578 -130861954 + U2 snRNA snRNA 1 53 -135 189 0 0 0 chr5 72225763 72225784 -130859748 + (TA)n Simple_repeat Simple_repeat 2 22 0 2136 128 3 7 chr5 72226347 72226644 -130858888 - AluSx SINE Alu -16 296 1 288 236 91 140 chr5 72226918 72227269 -130858263 - L1ME LINE L1 -259 5862 5529 2089 117 3 0 chr5 72227272 72227555 -130857977 + AluSx SINE Alu 3 286 -26 203 373 27 0 chr5 72228915 72228990 -130856542 + MIR SINE MIR 68 144 -64 180 279 66 0 chr5 72229171 72229232 -130856300 - L3 LINE CR1 -338 1239 1175 1507 180 17 57 chr5 72229251 72229393 -130856139 + AluJo SINE Alu 5 130 -182 2497 59 0 3 chr5 72229393 72229696 -130855836 + AluY SINE Alu 1 302 -9 1507 180 17 57 chr5 72229696 72229853 -130855679 + AluJo SINE Alu 130 292 -20 21 0 0 0 chr5 72231302 72231323 -130854209 + AT_rich Low_complexity Low_complexity 1 21 0 313 247 126 11 chr5 72231777 72231951 -130853581 - L1ME4a LINE L1 -240 5881 5688 339 250 16 55 chr5 72231968 72232096 -130853436 + MIR SINE MIR 110 232 -30 256 320 202 22 chr5 72232109 72232337 -130853195 + L2 LINE L2 1988 2256 -1058 4957 186 60 63 chr5 72232547 72232582 -130852950 + L1MB2 LINE L1 3741 3775 -2396 2302 74 7 10 chr5 72232582 72232880 -130852652 + AluSp SINE Alu 1 297 -16 4957 186 60 63 chr5 72232880 72233434 -130852098 + L1MB2 LINE L1 3775 4329 -1842 425 136 0 0 chr5 72233434 72233500 -130852032 + U3 snRNA snRNA 1 66 -151 4957 186 60 63 chr5 72233500 72233561 -130851971 + L1MB2 LINE L1 4329 4389 -1782 569 89 0 0 chr5 72233561 72233640 -130851892 + MADE1 DNA Mariner 2 80 0 4957 186 60 63 chr5 72233640 72233969 -130851563 + L1MB2 LINE L1 4389 4717 -1454 2750 130 14 5 chr5 72233969 72234393 -130851139 - MSTA LTR MaLR 0 428 1 4957 186 60 63 chr5 72234393 72235407 -130850125 + L1MB2 LINE L1 4717 5790 -381 2795 67 3 0 chr5 72235407 72235753 -130849779 - THE1A LTR MaLR 0 355 9 6608 108 9 1 chr5 72235790 72236719 -130848813 - THE1A-int LTR MaLR -644 936 1 2810 68 6 0 chr5 72236719 72237072 -130848460 - THE1A LTR MaLR 0 355 1 2015 147 46 3 chr5 72237073 72237441 -130848091 + L1MB2 LINE L1 5787 6170 -1 485 294 7 0 chr5 72237443 72237586 -130847946 + L1MC4a LINE L1 5777 5920 -1888 308 305 63 52 chr5 72237686 72237860 -130847672 + L1MC4a LINE L1 6052 6227 -1581 676 204 23 123 chr5 72237873 72238080 -130847452 + L1MC5 LINE L1 7491 7717 -244 701 184 8 8 chr5 72238080 72238205 -130847327 - FLAM_A SINE Alu -5 128 4 2113 130 7 0 chr5 72238212 72238512 -130847020 - AluSp SINE Alu -11 302 1 676 204 23 123 chr5 72238512 72238727 -130846805 + L1MC5 LINE L1 7723 7878 -83 755 59 59 0 chr5 72238778 72238879 -130846653 - U6 snRNA snRNA 0 107 1 1303 222 73 18 chr5 72239332 72239728 -130845804 + L1ME3A LINE L1 5753 6170 0 256 304 0 14 chr5 72239868 72239937 -130845595 + L2 LINE L2 3184 3251 -62 * 1409 268 68 88 chr5 72239908 72240289 -130845243 + L2 LINE L2 2378 2765 -548 1559 162 22 22 chr5 72240289 72240561 -130844971 + AluJb SINE Alu 11 282 -30 1409 268 68 88 chr5 72240561 72241140 -130844392 + L2 LINE L2 2765 3313 0 1544 145 99 34 chr5 72241419 72241771 -130843761 + THE1C LTR MaLR 1 375 0 1026 206 85 7 chr5 72242060 72242332 -130843200 - LTR50 LTR ERVL 0 795 503 602 226 73 0 chr5 72242356 72242493 -130843039 - LTR50 LTR ERVL -648 147 1 193 368 18 70 chr5 72242966 72243137 -130842395 - L2 LINE L2 -224 3048 2887 1242 162 0 5 chr5 72243648 72243845 -130841687 + AluJb SINE Alu 86 281 -31 809 293 95 124 chr5 72243845 72244850 -130840682 + L2 LINE L2 2208 3180 -92 192 300 111 11 chr5 72246451 72246541 -130838991 - MER5A DNA MER1_type -18 171 73 256 226 0 0 chr5 72246575 72246628 -130838904 - MER5B DNA MER1_type -125 53 1 1742 180 3 3 chr5 72246653 72246964 -130838568 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr5 72247133 72247175 -130838357 + AT_rich Low_complexity Low_complexity 1 42 0 2120 137 0 0 chr5 72248569 72248869 -130836663 + AluSx SINE Alu 1 300 -12 599 126 63 18 chr5 72248892 72249003 -130836529 + L1MB3 LINE L1 6068 6183 0 1891 149 0 13 chr5 72249017 72249318 -130836214 - AluSx SINE Alu -15 297 1 282 225 14 0 chr5 72249390 72249461 -130836071 + MER112 DNA MER1_type 8 79 -181 855 291 53 28 chr5 72249937 72250295 -130835237 - MLT1I LTR MaLR -38 371 5 2239 107 13 0 chr5 72250480 72250780 -130834752 + AluSx SINE Alu 1 304 -8 1997 149 3 0 chr5 72250836 72251137 -130834395 - AluSq SINE Alu -11 302 1 1060 240 111 57 chr5 72253807 72253916 -130831616 + L1MC4a LINE L1 5317 5419 -2389 2155 121 0 10 chr5 72253916 72254222 -130831310 + AluSx SINE Alu 1 303 -9 1060 240 111 57 chr5 72254222 72254600 -130830932 + L1MC4a LINE L1 5419 5830 -1978 758 139 0 2 chr5 72254910 72255158 -130830374 + AluJ SINE Alu 1 294 -18 2296 91 0 0 chr5 72255187 72255473 -130830059 + AluY SINE Alu 1 286 -25 23 54 0 0 chr5 72255915 72255952 -130829580 + AT_rich Low_complexity Low_complexity 1 37 0 1824 149 0 18 chr5 72255952 72256233 -130829299 - AluJb SINE Alu -20 292 17 1993 117 0 48 chr5 72256281 72256597 -130828935 - AluSx SINE Alu -11 301 1 431 257 171 20 chr5 72257337 72257489 -130828043 + MER5B DNA MER1_type 1 175 -3 220 241 404 0 chr5 72257818 72257959 -130827573 + MIR SINE MIR 20 217 -45 216 0 0 0 chr5 72258827 72258851 -130826681 + (T)n Simple_repeat Simple_repeat 1 24 0 304 209 66 77 chr5 72260348 72260439 -130825093 - MIR SINE MIR -150 112 23 2269 84 7 0 chr5 72260573 72260872 -130824660 + AluY SINE Alu 1 301 -10 2223 84 40 0 chr5 72260978 72261277 -130824255 + AluSx SINE Alu 1 311 -1 1690 142 20 0 chr5 72261503 72261757 -130823775 + AluSx SINE Alu 39 297 -15 2133 91 0 42 chr5 72262578 72262886 -130822646 - AluSg SINE Alu -14 296 2 1351 103 29 29 chr5 72262941 72263145 -130822387 - AluSg/x SINE Alu -15 295 92 199 267 0 0 chr5 72263367 72263412 -130822120 - MIR3 SINE MIR -26 182 138 300 253 189 0 chr5 72265192 72265287 -130820245 - L2 LINE L2 -5 3308 3196 2093 139 15 3 chr5 72265482 72265819 -130819713 - L1PA15 LINE L1 0 6165 5825 1197 125 0 83 chr5 72266163 72266379 -130819153 + AluJb SINE Alu 84 281 -31 21 0 0 0 chr5 72266621 72266642 -130818890 + AT_rich Low_complexity Low_complexity 1 21 0 632 275 40 36 chr5 72266660 72266882 -130818650 + MIR SINE MIR 36 258 -4 198 225 0 25 chr5 72267215 72267255 -130818277 - L2 LINE L2 -271 3042 3004 2232 53 46 3 chr5 72267402 72267684 -130817848 - AluY SINE Alu -17 294 1 2584 59 0 0 chr5 72268094 72268401 -130817131 - AluY SINE Alu -4 307 1 303 315 61 24 chr5 72268454 72268667 -130816865 - L1M4 LINE L1 -1350 4796 4576 2141 108 7 26 chr5 72268725 72269030 -130816502 + AluSx SINE Alu 1 299 -13 283 281 22 0 chr5 72270166 72270255 -130815277 + L1ME LINE L1 5778 5868 -253 1985 134 7 0 chr5 72270261 72270553 -130814979 - AluSx SINE Alu -13 299 6 2476 76 0 0 chr5 72271470 72271771 -130813761 + AluY SINE Alu 5 305 -6 2368 94 0 13 chr5 72271953 72272261 -130813271 + AluSx SINE Alu 1 304 -8 2208 99 37 64 chr5 72272706 72272918 -130812614 - THE1B LTR MaLR 0 364 165 2070 134 0 13 chr5 72272918 72273223 -130812309 + AluSx SINE Alu 1 301 -11 2208 99 37 64 chr5 72273223 72273384 -130812148 - THE1B LTR MaLR -199 165 1 22 80 0 0 chr5 72273442 72273492 -130812040 + AT_rich Low_complexity Low_complexity 1 50 0 1530 189 24 10 chr5 72273494 72273791 -130811741 + AluJo SINE Alu 1 301 -11 205 321 0 0 chr5 72274092 72274148 -130811384 - L3 LINE CR1 -6 1571 1516 729 211 116 0 chr5 72274225 72274372 -130811160 + MER58B DNA MER1_type 2 165 -176 692 191 15 0 chr5 72274372 72274503 -130811029 + FLAM_C SINE Alu 1 133 -10 938 196 16 11 chr5 72274504 72274693 -130810839 + MER58B DNA MER1_type 151 340 -1 1893 181 0 0 chr5 72275041 72275350 -130810182 - AluJo SINE Alu -3 309 1 1415 195 14 35 chr5 72275539 72275826 -130809706 + AluJo SINE Alu 1 281 -31 197 83 28 0 chr5 72275829 72275865 -130809667 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 236 178 0 68 chr5 72276067 72276140 -130809392 - L1P LINE L1 -2736 3410 3343 2427 78 0 0 chr5 72276157 72276452 -130809080 + AluSx SINE Alu 1 295 -17 362 282 144 25 chr5 72276589 72276791 -130808741 - L1M4 LINE L1 -2983 3163 2938 822 194 69 11 chr5 72276812 72276987 -130808545 - AluJo SINE Alu -37 275 91 31 0 0 0 chr5 72277000 72277031 -130808501 + AT_rich Low_complexity Low_complexity 1 31 0 300 246 94 56 chr5 72277176 72277464 -130808068 - L1M4 LINE L1 -3190 2956 2658 2589 55 3 0 chr5 72277653 72277963 -130807569 + AluY SINE Alu 1 311 0 419 319 60 26 chr5 72278040 72278306 -130807226 - HAL1b LINE L1 -731 617 343 635 138 0 0 chr5 72278368 72278462 -130807070 - AluSq SINE Alu -88 225 132 2125 122 3 0 chr5 72278718 72279014 -130806518 + AluSx SINE Alu 3 299 -13 2369 89 0 3 chr5 72279031 72279334 -130806198 + AluSq SINE Alu 1 302 -11 802 221 91 35 chr5 72279335 72279534 -130805998 + MIR SINE MIR 53 262 0 2366 61 0 0 chr5 72279639 72279939 -130805593 + AluY SINE Alu 1 300 0 659 210 113 65 chr5 72280080 72280328 -130805204 - L2 LINE L2 0 3313 3054 969 190 96 47 chr5 72280509 72281137 -130804395 - L1MC4 LINE L1 -1200 6608 6007 325 322 46 11 chr5 72282057 72282144 -130803388 + MIR SINE MIR 28 117 -145 212 375 34 0 chr5 72282359 72282447 -130803085 + L2 LINE L2 2993 3083 -189 290 263 38 31 chr5 72282823 72282983 -130802549 - L1ME4a LINE L1 -69 6052 5892 1932 160 0 3 chr5 72283049 72283343 -130802189 + AluJb SINE Alu 1 293 -19 373 270 131 29 chr5 72283461 72283829 -130801703 - L1ME4a LINE L1 -460 5661 5255 2444 73 0 7 chr5 72283974 72284274 -130801258 - AluY SINE Alu -13 298 1 2456 89 0 0 chr5 72284274 72284578 -130800954 - AluSq SINE Alu -9 304 1 1048 202 162 0 chr5 72285256 72285503 -130800029 + AluJb SINE Alu 2 288 -14 2393 90 3 0 chr5 72285967 72286279 -130799253 - AluSq SINE Alu 0 313 1 225 94 0 0 chr5 72286441 72286473 -130799059 + (T)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 72289778 72289801 -130795731 + AT_rich Low_complexity Low_complexity 1 23 0 2305 109 0 0 chr5 72290742 72291044 -130794488 + AluSg SINE Alu 1 302 -8 1026 129 7 0 chr5 72291045 72291192 -130794340 + AluSg/x SINE Alu 132 279 -31 2189 109 7 0 chr5 72291216 72291509 -130794023 + AluSx SINE Alu 1 295 -17 26 74 0 0 chr5 72291733 72291787 -130793745 + AT_rich Low_complexity Low_complexity 1 54 0 686 148 51 152 chr5 72292704 72292823 -130792709 - L1MC2 LINE L1 -11 6333 6204 252 77 0 0 chr5 72292823 72292862 -130792670 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 686 148 51 152 chr5 72292862 72292882 -130792650 - L1MC2 LINE L1 -140 6204 6184 1599 153 0 24 chr5 72292882 72293136 -130792396 - AluSx SINE Alu -64 248 1 686 148 51 152 chr5 72293136 72293252 -130792280 - L1MC2 LINE L1 -160 6184 6103 415 197 128 26 chr5 72293254 72293371 -130792161 - FLAM_A SINE Alu 0 142 14 532 131 50 0 chr5 72293373 72293472 -130792060 - L1MC2 LINE L1 -241 6103 6000 197 338 0 39 chr5 72293534 72293611 -130791921 - MIR SINE MIR -71 191 118 1543 192 75 7 chr5 72293818 72294110 -130791422 + AluJo SINE Alu 1 312 0 636 110 0 73 chr5 72294452 72294561 -130790971 + FRAM SINE Alu 63 163 -13 23 0 0 0 chr5 72297621 72297644 -130787888 + AT_rich Low_complexity Low_complexity 1 23 0 603 202 0 8 chr5 72299035 72299159 -130786373 - MER58B DNA MER1_type 0 341 219 915 99 0 8 chr5 72299196 72299317 -130786215 + AluSg/x SINE Alu 172 291 -21 1262 239 74 11 chr5 72300975 72301435 -130784097 - L1M4 LINE L1 -2429 3717 3229 362 298 61 22 chr5 72301807 72301988 -130783544 + MER5A DNA MER1_type 2 189 0 2304 95 3 3 chr5 72302064 72302369 -130783163 - AluSx SINE Alu -7 305 1 1725 146 28 21 chr5 72302444 72302578 -130782954 + AluSq SINE Alu 1 133 -180 2425 71 3 0 chr5 72302578 72302875 -130782657 + AluSc SINE Alu 1 298 -11 1725 146 28 21 chr5 72302875 72303028 -130782504 + AluSq SINE Alu 133 290 -23 23 0 0 0 chr5 72303223 72303246 -130782286 + AT_rich Low_complexity Low_complexity 1 23 0 202 308 90 0 chr5 72305569 72305647 -130779885 + MIR SINE MIR 80 164 -98 186 43 0 0 chr5 72305755 72305778 -130779754 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 1573 150 114 16 chr5 72307459 72307765 -130777767 + MER1B DNA MER1_type 2 337 0 2196 118 0 0 chr5 72307778 72308067 -130777465 - AluSx SINE Alu -18 294 6 181 333 115 10 chr5 72309201 72309297 -130776235 + MER5B DNA MER1_type 28 133 -45 17693 130 38 40 chr5 72309702 72310359 -130775173 + L1PA11 LINE L1 1727 2383 -3791 646 143 0 0 chr5 72310359 72310457 -130775075 + AluSg/x SINE Alu 206 303 -6 17693 130 38 40 chr5 72310457 72313456 -130772076 + L1PA11 LINE L1 2383 5471 -703 2055 129 19 13 chr5 72313456 72313767 -130771765 + AluSq SINE Alu 1 313 0 17693 130 38 40 chr5 72313767 72314470 -130771062 + L1PA11 LINE L1 5471 6174 0 2233 118 0 10 chr5 72315805 72316110 -130769422 + AluSq SINE Alu 1 302 -11 1881 319 191 33 chr5 72316143 72316939 -130768593 - L2 LINE L2 -204 3109 2440 3012 190 48 16 chr5 72316939 72317571 -130767961 + MER82 DNA MER2_type 2 653 0 1881 319 191 33 chr5 72317571 72317800 -130767732 - L2 LINE L2 -873 2440 2248 2376 67 0 0 chr5 72317800 72318082 -130767450 + AluY SINE Alu 21 302 -9 1881 319 191 33 chr5 72318082 72318201 -130767331 - L2 LINE L2 -1065 2248 2149 2098 144 3 0 chr5 72318201 72318499 -130767033 - AluJb SINE Alu -13 299 1 1881 319 191 33 chr5 72318499 72318674 -130766858 - L2 LINE L2 -1164 2149 2003 2183 122 0 0 chr5 72318674 72318968 -130766564 - AluSx SINE Alu -18 294 1 1881 319 191 33 chr5 72318968 72319271 -130766261 - L2 LINE L2 -1310 2003 1227 815 142 0 8 chr5 72320640 72320774 -130764758 - FLAM_C SINE Alu 0 133 1 2315 109 0 0 chr5 72321872 72322184 -130763348 - AluSx SINE Alu 0 312 1 31 0 0 0 chr5 72322285 72322316 -130763216 + AT_rich Low_complexity Low_complexity 1 31 0 2393 70 0 10 chr5 72322924 72323225 -130762307 - AluY SINE Alu -13 298 1 404 236 65 24 chr5 72323731 72323854 -130761678 - L2 LINE L2 -1 3312 3185 191 324 70 28 chr5 72323987 72324129 -130761403 + L3 LINE CR1 803 950 -627 1829 171 0 4 chr5 72324271 72324552 -130760980 + AluJb SINE Alu 1 280 -32 308 294 81 31 chr5 72324626 72324786 -130760746 + L1M4 LINE L1 2231 2398 -3748 307 267 11 44 chr5 72324876 72324966 -130760566 + L1MC4a LINE L1 6021 6107 -1701 1320 270 55 25 chr5 72324995 72325524 -130760008 + L1MC4a LINE L1 6281 6825 -983 342 71 36 0 chr5 72325540 72325596 -130759936 - Alu SINE Alu -4 297 240 1094 95 0 14 chr5 72325596 72325744 -130759788 - AluSq/x SINE Alu -167 146 1 2330 48 38 7 chr5 72325774 72326067 -130759465 + AluY SINE Alu 1 302 -9 1511 257 61 54 chr5 72326078 72326869 -130758663 + L1MC4 LINE L1 6935 7730 -312 1623 144 66 0 chr5 72327039 72327295 -130758237 + AluSx SINE Alu 1 273 -39 237 139 0 0 chr5 72327308 72327351 -130758181 + (GGGAA)n Simple_repeat Simple_repeat 2 44 0 726 177 0 32 chr5 72327363 72327549 -130757983 + GA-rich Low_complexity Low_complexity 1 180 0 239 388 34 63 chr5 72327772 72327978 -130757554 - L2 LINE L2 -8 3264 3065 1072 155 19 34 chr5 72327986 72328192 -130757340 + MER3 DNA MER1_type 5 207 -2 2019 104 42 7 chr5 72328263 72328550 -130756982 + AluSq SINE Alu 1 297 -16 2034 93 0 7 chr5 72328588 72328857 -130756675 - AluSq SINE Alu -10 303 37 647 236 89 0 chr5 72329923 72330101 -130755431 - MIR SINE MIR -36 226 32 216 312 136 18 chr5 72330184 72330405 -130755127 + L2 LINE L2 2861 3107 -165 205 264 121 33 chr5 72330649 72330740 -130754792 - L2 LINE L2 -5 3308 3210 868 228 93 0 chr5 72331915 72332161 -130753371 + L1ME2 LINE L1 5728 5996 -168 275 146 38 13 chr5 72332182 72332251 -130753281 - AluSq SINE Alu -130 173 135 398 216 26 9 chr5 72332252 72332368 -130753164 + L1ME2 LINE L1 6035 6152 -12 753 251 6 11 chr5 72332454 72332629 -130752903 - MIR SINE MIR -50 212 39 5905 117 9 4 chr5 72332633 72333655 -130751877 + L1PB3 LINE L1 5124 6148 -6 199 200 0 0 chr5 72333673 72333713 -130751819 - MIR SINE MIR -217 45 6 757 146 81 0 chr5 72333750 72333873 -130751659 - AluSq SINE Alu -179 133 1 446 340 59 77 chr5 72333889 72334502 -130751030 + L3 LINE CR1 667 1290 -287 2430 46 0 46 chr5 72334502 72334827 -130750705 + AluY SINE Alu 1 310 -1 446 340 59 77 chr5 72334827 72334843 -130750689 + L3 LINE CR1 1290 1305 -272 2239 129 0 0 chr5 72334843 72335154 -130750378 + AluSx SINE Alu 1 311 -1 446 340 59 77 chr5 72335154 72335285 -130750247 + L3 LINE CR1 1305 1414 -163 1017 146 5 44 chr5 72335698 72335746 -130749786 - MER3 DNA MER1_type -4 205 157 2428 66 0 3 chr5 72335746 72336048 -130749484 - AluY SINE Alu -10 301 1 1017 146 5 44 chr5 72336048 72336204 -130749328 - MER3 DNA MER1_type -52 157 9 858 258 86 62 chr5 72336212 72336678 -130748854 - LTR33A LTR ERVL -45 478 2 916 144 80 58 chr5 72336705 72336893 -130748639 - MLT1A1 LTR MaLR -171 194 3 349 292 62 40 chr5 72336893 72337338 -130748194 + L1MC/D LINE L1 5329 5790 -331 206 308 51 26 chr5 72337344 72337422 -130748110 - L2 LINE L2 -8 3264 3185 1828 141 3 59 chr5 72337539 72337859 -130747673 + AluSx SINE Alu 1 302 -10 2316 53 7 3 chr5 72337871 72338193 -130747339 + AluY SINE Alu 1 323 0 275 186 35 23 chr5 72338224 72338310 -130747222 + L1ME4a LINE L1 5998 6084 -37 1844 167 3 35 chr5 72339278 72339595 -130745937 + AluJb SINE Alu 3 309 -3 702 192 0 68 chr5 72339799 72339861 -130745671 + L1MB8 LINE L1 6002 6067 -111 1890 148 3 30 chr5 72339861 72340165 -130745367 + AluJb SINE Alu 1 296 -16 702 192 0 68 chr5 72340165 72340279 -130745253 + L1MB8 LINE L1 6067 6166 -12 2301 123 0 0 chr5 72340665 72340975 -130744557 + AluSx SINE Alu 1 310 -2 2169 114 7 7 chr5 72341094 72341401 -130744131 + AluSx SINE Alu 1 307 -5 369 0 0 0 chr5 72341511 72341552 -130743980 + (CA)n Simple_repeat Simple_repeat 2 42 0 2288 103 0 0 chr5 72341556 72341848 -130743684 - AluSc SINE Alu -17 292 1 2076 137 3 0 chr5 72342875 72343174 -130742358 + AluJb SINE Alu 1 300 -12 21 57 0 0 chr5 72343379 72343414 -130742118 + AT_rich Low_complexity Low_complexity 1 35 0 2352 92 0 0 chr5 72343498 72343792 -130741740 - AluSc SINE Alu -15 294 1 955 167 7 0 chr5 72343865 72344015 -130741517 - AluJo SINE Alu -161 151 1 2142 111 3 20 chr5 72344826 72345132 -130740400 + AluSg SINE Alu 1 301 -9 1223 106 0 0 chr5 72345132 72345293 -130740239 + AluSg/x SINE Alu 133 293 -17 1423 173 3 79 chr5 72346081 72346410 -130739122 + AluJo SINE Alu 1 304 -8 182 357 0 0 chr5 72346532 72346574 -130738958 + MIR SINE MIR 30 71 -137 248 237 0 34 chr5 72347368 72347427 -130738105 + C-rich Low_complexity Low_complexity 5 61 0 1716 161 23 23 chr5 72347427 72347732 -130737800 - AluJo SINE Alu -6 306 2 1595 160 21 78 chr5 72347861 72348192 -130737340 + AluJb SINE Alu 1 312 0 24 0 0 0 chr5 72348212 72348236 -130737296 + AT_rich Low_complexity Low_complexity 1 24 0 562 246 32 43 chr5 72348357 72348544 -130736988 - L2 LINE L2 0 3313 3129 2143 118 0 3 chr5 72348648 72348945 -130736587 + AluSx SINE Alu 1 296 -16 6972 254 116 24 chr5 72349661 72349876 -130735656 - L2 LINE L2 -4 3309 3115 2265 92 0 0 chr5 72349876 72350185 -130735347 - AluSx SINE Alu 0 309 1 6972 254 116 24 chr5 72350185 72352280 -130733252 - L2 LINE L2 -198 3115 737 930 131 162 61 chr5 72352280 72352478 -130733054 - MER20 DNA MER1_type -1 218 1 6972 254 116 24 chr5 72352478 72352711 -130732821 - L2 LINE L2 -2576 737 527 187 244 73 0 chr5 72352731 72352772 -130732760 - MIR SINE MIR -132 76 33 2039 128 0 22 chr5 72353423 72353735 -130731797 + AluJb SINE Alu 1 305 -7 392 317 108 11 chr5 72354121 72354186 -130731346 + MIR SINE MIR 47 104 -158 2175 135 3 0 chr5 72354186 72354497 -130731035 - AluSx SINE Alu 0 312 1 392 317 108 11 chr5 72354497 72354617 -130730915 + MIR SINE MIR 104 250 -12 272 230 14 0 chr5 72356241 72356315 -130729217 + G-rich Low_complexity Low_complexity 3 77 0 2718 33 0 3 chr5 72357648 72357955 -130727577 + AluY SINE Alu 1 306 -5 894 163 87 60 chr5 72357955 72358207 -130727325 - Charlie1a DNA MER1_type -3 1452 1194 3414 154 92 16 chr5 72358222 72358899 -130726633 - L1MB4 LINE L1 0 6180 5453 2560 51 0 13 chr5 72358905 72359219 -130726313 - AluY SINE Alu 0 311 2 5661 180 39 45 chr5 72359222 72359946 -130725586 - Charlie1a DNA MER1_type -1557 1204 488 2600 53 0 0 chr5 72359946 72360246 -130725286 + AluY SINE Alu 1 300 -11 5661 180 39 45 chr5 72360246 72360732 -130724800 - Charlie1a DNA MER1_type -2273 488 1 289 284 125 0 chr5 72361180 72361268 -130724264 + MIR SINE MIR 30 128 -80 1636 168 10 24 chr5 72361294 72361585 -130723947 - AluJo SINE Alu -25 287 1 211 241 0 37 chr5 72361585 72361639 -130723893 + MIR3 SINE MIR 122 173 -35 2069 131 7 3 chr5 72361877 72362183 -130723349 - AluSx SINE Alu -5 307 1 327 265 39 69 chr5 72362200 72362404 -130723128 - L1ME4a LINE L1 -2 6119 5922 671 333 66 8 chr5 72362420 72362799 -130722733 - L1ME4a LINE L1 -307 5814 5414 2105 137 0 0 chr5 72362960 72363259 -130722273 - AluJb SINE Alu -13 299 1 2356 97 0 3 chr5 72363480 72363789 -130721743 - AluSg SINE Alu -2 308 1 488 226 43 9 chr5 72364036 72364151 -130721381 + MIR SINE MIR 32 150 -112 1169 299 85 32 chr5 72364161 72364622 -130720910 - L2 LINE L2 0 3313 2829 2153 127 16 0 chr5 72364658 72364965 -130720567 - AluSx SINE Alu 0 312 1 1652 239 118 31 chr5 72365046 72365536 -130719996 - MLT1H LTR MaLR -16 533 1 2063 158 0 0 chr5 72365852 72366163 -130719369 - AluJb SINE Alu 0 312 2 1871 141 7 17 chr5 72367841 72368000 -130717532 - AluSx SINE Alu -18 294 138 2139 91 0 0 chr5 72368000 72368276 -130717256 - AluY SINE Alu -1 310 35 1871 141 7 17 chr5 72368276 72368413 -130717119 - AluSx SINE Alu -174 138 1 1975 104 19 2 chr5 72369140 72369445 -130716087 + THE1C LTR MaLR 1 375 0 1019 268 107 25 chr5 72370376 72370899 -130714633 - L1ME LINE L1 -347 5823 5258 1583 190 0 15 chr5 72370942 72371216 -130714316 + AluJb SINE Alu 11 280 -32 377 321 7 22 chr5 72371258 72371395 -130714137 - L2 LINE L2 -17 3296 3162 263 326 37 37 chr5 72371538 72371673 -130713859 + L2 LINE L2 3179 3313 0 1843 166 10 3 chr5 72371962 72372263 -130713269 + AluJb SINE Alu 1 303 -9 1618 187 40 3 chr5 72372415 72372715 -130712817 + AluJb SINE Alu 1 311 -1 807 121 19 83 chr5 72372717 72372874 -130712658 - L1MA8 LINE L1 -181 6110 5964 1093 133 0 0 chr5 72372875 72373025 -130712507 - AluSx SINE Alu -17 293 144 576 108 43 0 chr5 72373029 72373168 -130712364 + (TA)n Simple_repeat Simple_repeat 1 145 0 1075 119 0 0 chr5 72373173 72373316 -130712216 - AluSx SINE Alu -169 143 1 4115 189 31 45 chr5 72373317 72374218 -130711314 - L1MA8 LINE L1 -321 5970 5058 1984 172 80 44 chr5 72374218 72374630 -130710902 - MSTC LTR MaLR 0 428 2 4115 189 31 45 chr5 72374630 72374981 -130710551 - L1MA8 LINE L1 -1233 5058 4750 2102 112 20 13 chr5 72374981 72375285 -130710247 - AluSx SINE Alu -6 306 1 4115 189 31 45 chr5 72375285 72375468 -130710064 - L1MA8 LINE L1 -1541 4750 4566 189 264 0 56 chr5 72378047 72378119 -130707413 + L2 LINE L2 3016 3083 -189 993 196 252 0 chr5 72378181 72378411 -130707121 - AluSx SINE Alu -24 288 1 1883 132 85 0 chr5 72378730 72379011 -130706521 + AluSx SINE Alu 1 305 -7 577 226 181 0 chr5 72379542 72379719 -130705813 + MIR SINE MIR 20 228 -34 269 305 154 24 chr5 72379715 72379961 -130705571 - L2 LINE L2 -372 2942 2665 * 1250 298 72 76 chr5 72379961 72380836 -130704696 - L2 LINE L2 -838 2476 1604 2598 53 0 0 chr5 72380836 72381136 -130704396 + AluY SINE Alu 1 300 -11 1250 298 72 76 chr5 72381136 72381411 -130704121 - L2 LINE L2 -1710 1604 1330 229 327 0 0 chr5 72381639 72381694 -130703838 - Zaphod DNA AcHobo -1 4030 3976 * 884 293 136 21 chr5 72381689 72382027 -130703505 - MER115 DNA AcHobo -270 423 47 2405 91 0 0 chr5 72382032 72382329 -130703203 + AluSx SINE Alu 1 297 -15 332 363 127 28 chr5 72382380 72382591 -130702941 - L2 LINE L2 -2338 976 787 1829 150 37 13 chr5 72382591 72382891 -130702641 + AluJo SINE Alu 1 307 -5 332 363 127 28 chr5 72382891 72382971 -130702561 - L2 LINE L2 -2527 787 716 2760 100 11 3 chr5 72382971 72383332 -130702200 + THE1B LTR MaLR 1 364 0 332 363 127 28 chr5 72383332 72383711 -130701821 - L2 LINE L2 -2598 716 239 950 214 66 0 chr5 72384277 72384473 -130701059 + MER3 DNA MER1_type 1 209 0 1766 181 10 16 chr5 72384550 72384928 -130700604 + AluJo SINE Alu 1 376 0 1710 178 14 7 chr5 72386071 72386364 -130699168 + AluJb SINE Alu 1 295 -17 969 124 14 0 chr5 72387201 72387346 -130698186 + L1MA6 LINE L1 6154 6300 0 2055 144 0 3 chr5 72387480 72387779 -130697753 + AluSx SINE Alu 1 298 -14 220 345 107 54 chr5 72388628 72389107 -130696425 + L2 LINE L2 242 745 -2569 273 347 107 16 chr5 72389973 72390281 -130695251 + L2 LINE L2 1729 2064 -1250 185 271 69 83 chr5 72390311 72390529 -130695003 + L2 LINE L2 2258 2472 -842 239 282 48 48 chr5 72390643 72390746 -130694786 + L2 LINE L2 2672 2774 -540 750 192 15 8 chr5 72390785 72390915 -130694617 - FLAM_C SINE Alu -11 132 2 278 335 65 96 chr5 72391009 72391302 -130694230 + L2 LINE L2 2987 3270 -2 * 378 248 47 60 chr5 72391284 72391433 -130694099 + MIR SINE MIR 75 221 -41 * 1086 229 45 8 chr5 72391423 72391668 -130693864 + MIR SINE MIR 7 260 -2 199 49 49 49 chr5 72391700 72391741 -130693791 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1851 164 0 10 chr5 72392064 72392356 -130693176 + AluJo SINE Alu 1 289 -23 28 0 0 0 chr5 72392583 72392611 -130692921 + AT_rich Low_complexity Low_complexity 1 28 0 779 261 45 17 chr5 72393134 72393421 -130692111 + L1ME4a LINE L1 5561 5855 -266 789 208 84 117 chr5 72393463 72393499 -130692033 - MLT2D LTR ERVL -4 516 480 255 31 0 0 chr5 72393499 72393531 -130692001 + (TG)n Simple_repeat Simple_repeat 2 33 0 789 208 84 117 chr5 72393531 72393910 -130691622 - MLT2D LTR ERVL -40 480 63 285 214 107 9 chr5 72393910 72394022 -130691510 + L1ME4a LINE L1 5987 6109 -12 1784 159 0 37 chr5 72394641 72394937 -130690595 - AluJo SINE Alu -27 285 1 2103 135 3 0 chr5 72395393 72395696 -130689836 - AluSq SINE Alu 0 313 10 1905 140 0 57 chr5 72396516 72396830 -130688702 + AluJb SINE Alu 1 296 -16 25 0 0 0 chr5 72397894 72397919 -130687613 + AT_rich Low_complexity Low_complexity 1 25 0 1692 102 0 9 chr5 72398435 72398660 -130686872 + AluSg/x SINE Alu 76 298 -12 1877 138 0 80 chr5 72399214 72399349 -130686183 + AluJb SINE Alu 1 145 -167 2325 103 0 0 chr5 72399349 72399650 -130685882 + AluSq SINE Alu 1 301 -12 1877 138 0 80 chr5 72399650 72399841 -130685691 + AluJb SINE Alu 145 301 -11 695 236 11 35 chr5 72400096 72400270 -130685262 - MLT1G LTR MaLR -6 561 392 1853 141 52 36 chr5 72400322 72400684 -130684848 - THE1C LTR MaLR 0 375 8 10332 121 19 38 chr5 72400692 72402297 -130683235 - THE1C-int LTR MaLR -3 1577 4 2001 140 47 16 chr5 72402300 72402664 -130682868 - THE1C LTR MaLR 0 375 1 1102 206 60 129 chr5 72402665 72403083 -130682449 - MLT1B LTR MaLR 0 390 2 901 248 83 38 chr5 72403083 72403368 -130682164 - MLT1G LTR MaLR -282 308 10 1903 118 14 7 chr5 72403379 72403659 -130681873 + L1MA1 LINE L1 6015 6296 -6 271 335 113 0 chr5 72403804 72403937 -130681595 - MIR SINE MIR -67 195 47 259 300 82 55 chr5 72403936 72404046 -130681486 + L2 LINE L2 3151 3263 -9 * 865 260 82 32 chr5 72404341 72405084 -130680448 + L1MC4 LINE L1 5184 5984 -180 911 163 0 0 chr5 72405848 72405989 -130679543 + AluJo SINE Alu 1 141 -171 21 36 0 0 chr5 72406025 72406053 -130679479 + AT_rich Low_complexity Low_complexity 1 28 0 1088 169 0 0 chr5 72406756 72407010 -130678522 - AluSg/x SINE Alu 0 388 135 868 202 6 17 chr5 72407057 72407230 -130678302 - AluJb SINE Alu -5 307 137 1783 157 20 23 chr5 72407241 72407546 -130677986 - AluJb SINE Alu -8 304 1 1946 157 0 0 chr5 72407774 72408061 -130677471 + AluJb SINE Alu 1 287 -25 272 225 153 0 chr5 72408196 72408276 -130677256 + MIR SINE MIR 71 160 -63 24 0 0 0 chr5 72408819 72408843 -130676689 + AT_rich Low_complexity Low_complexity 1 24 0 1927 157 14 0 chr5 72408843 72409136 -130676396 - AluSx SINE Alu -15 297 1 221 357 0 12 chr5 72409954 72410038 -130675494 + L3b LINE CR1 1249 1331 -252 2070 126 7 3 chr5 72410084 72410378 -130675154 + AluSx SINE Alu 1 295 -17 1266 171 78 0 chr5 72411708 72411925 -130673607 + MER46A DNA MER2_type 3 236 0 316 288 119 35 chr5 72412686 72412912 -130672620 - MLT1L LTR MaLR 0 615 371 942 195 22 16 chr5 72413233 72413418 -130672114 - MER5A DNA MER1_type 0 189 4 205 286 0 0 chr5 72413742 72413798 -130671734 - L2 LINE L2 0 3313 3258 1493 138 0 0 chr5 72414035 72414238 -130671294 - AluSx SINE Alu -108 204 2 2226 97 0 0 chr5 72414779 72415085 -130670447 - AluSc SINE Alu 0 306 1 781 186 102 0 chr5 72417225 72417402 -130668130 + L1MB4 LINE L1 5957 6151 -29 486 265 119 25 chr5 72417474 72417690 -130667842 - MLT1J LTR MaLR -168 278 43 854 162 0 14 chr5 72417691 72417833 -130667699 + FLAM_C SINE Alu 1 140 -3 258 203 0 34 chr5 72417837 72417896 -130667636 - MLT1J LTR MaLR -446 65 9 845 283 21 8 chr5 72418027 72418267 -130667265 - MIR SINE MIR 0 262 20 33 56 0 0 chr5 72418382 72418436 -130667096 + AT_rich Low_complexity Low_complexity 1 54 0 3684 159 29 37 chr5 72418470 72418498 -130667034 - L1MB3 LINE L1 -47 6136 6109 1239 154 207 63 chr5 72418498 72418817 -130666715 - MLT1A1 LTR MaLR 0 365 1 3684 159 29 37 chr5 72418817 72419484 -130666048 - L1MB3 LINE L1 -74 6109 5447 297 87 0 0 chr5 72419483 72419529 -130666003 + L1MB4 LINE L1 6134 6179 -1 * 22 94 0 0 chr5 72420464 72420528 -130665004 + AT_rich Low_complexity Low_complexity 1 64 0 208 390 42 0 chr5 72420591 72420686 -130664846 - L2 LINE L2 0 3313 3215 1818 171 0 17 chr5 72420688 72420987 -130664545 + AluJo SINE Alu 1 294 -18 412 233 0 0 chr5 72421255 72421328 -130664204 + FLAM_A SINE Alu 37 109 -33 268 264 28 0 chr5 72421350 72421364 -130664168 + (CATA)n Simple_repeat Simple_repeat 3 15 -61 204 40 0 0 chr5 72421364 72421389 -130664143 + (TG)n Simple_repeat Simple_repeat 2 26 0 268 264 28 0 chr5 72421389 72421446 -130664086 + (CATA)n Simple_repeat Simple_repeat 15 76 0 1870 147 28 14 chr5 72422667 72422803 -130662729 + AluJo SINE Alu 1 134 -178 2004 162 0 0 chr5 72422803 72423105 -130662427 + AluJb SINE Alu 1 302 -10 1870 147 28 14 chr5 72423105 72423254 -130662278 + AluJo SINE Alu 134 290 -22 697 249 116 62 chr5 72423303 72423544 -130661988 + MIR SINE MIR 7 260 -2 1573 165 107 0 chr5 72423610 72423882 -130661650 + AluSx SINE Alu 3 303 -9 255 270 90 0 chr5 72424020 72424120 -130661412 + MIR SINE MIR 98 206 -56 2637 111 36 0 chr5 72424445 72424807 -130660725 - THE1C LTR MaLR 0 375 1 2057 119 27 14 chr5 72425262 72425389 -130660143 + AluSx SINE Alu 3 127 -185 1966 161 0 0 chr5 72425389 72425688 -130659844 + AluSx SINE Alu 1 299 -13 2057 119 27 14 chr5 72425688 72425855 -130659677 + AluSx SINE Alu 127 301 -11 371 242 8 17 chr5 72427140 72427260 -130658272 - MER20B DNA MER1_type -1 782 664 284 203 0 0 chr5 72427384 72427443 -130658089 + MER116 DNA Mariner 7 65 -15 1830 148 60 0 chr5 72427479 72427762 -130657770 + AluJb SINE Alu 1 300 -12 730 269 19 5 chr5 72427868 72428080 -130657452 - L1MD3 LINE L1 -9 7986 7772 1119 261 130 56 chr5 72428097 72428441 -130657091 - MER20B DNA MER1_type -125 658 252 1864 155 21 0 chr5 72428441 72428732 -130656800 + AluJb SINE Alu 1 297 -15 1119 261 130 56 chr5 72428732 72428962 -130656570 - MER20B DNA MER1_type -531 252 41 1585 162 0 107 chr5 72429183 72429510 -130656022 + AluJb SINE Alu 1 292 -10 2146 129 0 0 chr5 72429517 72429819 -130655713 + AluSx SINE Alu 1 302 -10 368 302 13 54 chr5 72431642 72431791 -130653741 + MIR SINE MIR 77 219 -43 510 239 77 26 chr5 72432258 72432413 -130653119 - MIR SINE MIR -13 249 87 26 30 0 0 chr5 72432942 72432975 -130652557 + AT_rich Low_complexity Low_complexity 1 33 0 1980 161 0 3 chr5 72432990 72433294 -130652238 - AluJb SINE Alu -9 303 1 21 71 0 0 chr5 72433434 72433476 -130652056 + AT_rich Low_complexity Low_complexity 1 42 0 279 317 85 0 chr5 72433600 72433682 -130651850 - L2 LINE L2 -1 3271 3183 2038 75 24 0 chr5 72434506 72434758 -130650774 + AluY SINE Alu 1 258 -53 1918 141 0 28 chr5 72434778 72435120 -130650412 - AluJb SINE Alu 0 334 1 5127 199 71 51 chr5 72436194 72438042 -130647490 - MER52A LTR ERV1 0 1755 1 484 208 243 29 chr5 72438306 72438479 -130647053 + MIR SINE MIR 1 210 -52 1318 141 13 18 chr5 72438490 72438663 -130646869 + Tigger1 DNA MER2_type 4 177 -2241 1777 159 17 14 chr5 72438663 72438958 -130646574 - AluSx SINE Alu -14 298 3 1318 141 13 18 chr5 72438958 72439011 -130646521 + Tigger1 DNA MER2_type 177 229 -2189 264 148 0 74 chr5 72439008 72439062 -130646470 - FLAM SINE Alu -2 131 82 * 14770 113 19 44 chr5 72439054 72441024 -130644508 + Tigger1 DNA MER2_type 94 2112 -306 2217 128 0 0 chr5 72441024 72441336 -130644196 + AluSx SINE Alu 1 312 0 14770 113 19 44 chr5 72441336 72441567 -130643965 + Tigger1 DNA MER2_type 2112 2233 -185 2345 91 3 0 chr5 72441567 72441863 -130643669 - AluSx SINE Alu -10 302 6 14770 113 19 44 chr5 72441863 72442045 -130643487 + Tigger1 DNA MER2_type 2233 2418 0 886 68 0 0 chr5 72444694 72444811 -130640721 - L1MA2 LINE L1 -106 6198 6082 1920 150 7 3 chr5 72444826 72445119 -130640413 + AluJb SINE Alu 1 294 -18 431 70 0 0 chr5 72445451 72445508 -130640024 - L1MA2 LINE L1 -166 6138 6082 579 104 13 0 chr5 72445524 72445601 -130639931 + AluJ/FLAM SINE Alu 2 79 -233 2030 119 3 17 chr5 72445661 72445955 -130639577 + AluSx SINE Alu 1 290 -22 1602 203 7 10 chr5 72447763 72448059 -130637473 + AluJo SINE Alu 1 295 -17 335 225 72 22 chr5 72449038 72449176 -130636356 + L1ME4a LINE L1 5975 6119 -2 237 178 0 0 chr5 72450182 72450227 -130635305 + L1PA13 LINE L1 5785 5829 -332 690 119 9 18 chr5 72450227 72450320 -130635212 + AluSp/q SINE Alu 201 294 -19 2481 107 17 6 chr5 72450320 72450665 -130634867 + L1PA13 LINE L1 5815 6163 0 690 119 9 18 chr5 72450665 72450680 -130634852 + AluSp/q SINE Alu 294 308 -5 272 284 12 25 chr5 72452003 72452084 -130633448 + L3b LINE CR1 1406 1485 -98 241 160 60 0 chr5 72453357 72453407 -130632125 + GA-rich Low_complexity Low_complexity 2 54 0 380 189 324 0 chr5 72453495 72453606 -130631926 - MIR SINE MIR -96 166 20 337 174 54 33 chr5 72454432 72454524 -130631008 + L1MC5 LINE L1 7831 7924 -37 210 37 0 0 chr5 72454837 72454864 -130630668 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2050 148 3 3 chr5 72454882 72455193 -130630339 + AluSx SINE Alu 1 311 -1 385 325 0 0 chr5 72455326 72455440 -130630092 + LTR37B LTR ERV1 6 119 -349 1105 166 94 65 chr5 72455448 72455756 -130629776 + MER33 DNA MER1_type 6 322 -2 303 189 95 0 chr5 72455771 72455845 -130629687 + LTR37B LTR ERV1 119 199 -269 22 0 0 0 chr5 72458253 72458275 -130627257 + AT_rich Low_complexity Low_complexity 1 22 0 2080 106 18 0 chr5 72458946 72459229 -130626303 + AluSx SINE Alu 3 290 -22 593 217 47 8 chr5 72460086 72460215 -130625317 - MLT1A2 LTR MaLR -12 362 229 746 194 31 37 chr5 72460333 72460524 -130625008 - MLT1A2 LTR MaLR -183 191 2 1944 152 14 3 chr5 72460751 72461048 -130624484 + AluJo SINE Alu 9 308 -4 924 308 138 54 chr5 72461599 72461855 -130623677 + L3 LINE CR1 438 671 -906 2033 128 3 7 chr5 72461855 72462151 -130623381 + AluSx SINE Alu 1 295 -17 924 308 138 54 chr5 72462151 72462835 -130622697 + L3 LINE CR1 671 1457 -120 210 71 0 0 chr5 72463585 72463613 -130621919 + (A)n Simple_repeat Simple_repeat 1 28 0 329 288 144 8 chr5 72463878 72464003 -130621529 - L2 LINE L2 -4 3268 3127 819 168 0 0 chr5 72464490 72464615 -130620917 - FLAM_C SINE Alu -8 125 1 1015 166 0 18 chr5 72465984 72466153 -130619379 + FRAM SINE Alu 1 165 -11 1683 181 0 7 chr5 72466158 72466446 -130619086 + AluJb SINE Alu 1 286 -26 324 0 0 0 chr5 72466446 72466482 -130619050 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 1943 160 6 10 chr5 72467359 72467672 -130617860 + AluJb SINE Alu 1 312 0 1611 154 91 3 chr5 72467903 72468189 -130617343 + AluJb SINE Alu 1 311 -1 472 295 116 20 chr5 72469388 72469754 -130615778 + L1ME3A LINE L1 5587 5993 -169 1914 132 37 3 chr5 72469909 72470205 -130615327 + AluSq SINE Alu 1 306 -7 2207 107 40 0 chr5 72470692 72470992 -130614540 - AluSx SINE Alu 0 312 1 438 299 26 26 chr5 72471032 72471186 -130614346 + MLT1L LTR MaLR 163 316 -299 271 258 47 62 chr5 72471247 72471375 -130614157 + MLT1J LTR MaLR 386 511 0 834 203 0 70 chr5 72471570 72471621 -130613911 - AluJo/FRAM SINE Alu 0 312 259 1930 93 4 7 chr5 72471621 72471890 -130613642 - AluSq SINE Alu -2 311 44 834 203 0 70 chr5 72471890 72472025 -130613507 - AluJo/FRAM SINE Alu -53 259 139 240 302 0 58 chr5 72472314 72472400 -130613132 + MIR SINE MIR 154 234 -28 180 209 23 0 chr5 72472431 72472474 -130613058 - MIR SINE MIR -28 234 191 236 200 67 27 chr5 72472604 72472679 -130612853 - HAL1b LINE L1 -13 1335 1258 263 282 0 12 chr5 72472731 72472816 -130612716 - L1MC4 LINE L1 -1345 6697 6614 243 265 10 51 chr5 72472737 72472835 -130612697 + L1MC4 LINE L1 6614 6707 -1335 * 21 0 0 0 chr5 72473050 72473071 -130612461 + AT_rich Low_complexity Low_complexity 1 21 0 1538 153 22 83 chr5 72473198 72473385 -130612147 - AluJo SINE Alu -17 295 98 2726 122 49 2 chr5 72473385 72473795 -130611737 + L1PA15 LINE L1 5729 6157 -8 2102 104 7 27 chr5 72473796 72474095 -130611437 + AluSx SINE Alu 1 293 -19 1538 153 22 83 chr5 72474095 72474219 -130611313 - AluJo SINE Alu -213 99 1 1199 178 32 0 chr5 72474231 72474450 -130611082 - L1MB2 LINE L1 -2 6169 5944 198 143 268 54 chr5 72474481 72474537 -130610995 + L2 LINE L2 3205 3272 0 317 113 38 19 chr5 72474617 72474670 -130610862 - MSTB LTR MaLR 0 426 373 288 333 0 22 chr5 72474680 72474770 -130610762 - MIR SINE MIR -155 107 20 1418 205 3 77 chr5 72475049 72475425 -130610107 + MLT2C1 LTR ERVL 1 348 -49 291 71 0 0 chr5 72475438 72475480 -130610052 + (TG)n Simple_repeat Simple_repeat 1 42 0 1424 114 180 0 chr5 72476317 72476572 -130608960 - AluJo SINE Alu -11 301 1 212 337 119 0 chr5 72476851 72476952 -130608580 + MIR3 SINE MIR 85 197 -11 1337 182 23 58 chr5 72477162 72477470 -130608062 - AluJb SINE Alu -13 299 3 968 115 0 36 chr5 72478282 72478313 -130607219 + FLAM_C SINE Alu 1 32 -280 4472 89 5 0 chr5 72478313 72478864 -130606668 - MER41A LTR ERV1 0 554 1 968 115 0 36 chr5 72478864 72478971 -130606561 + FLAM_C SINE Alu 32 134 -178 280 146 0 0 chr5 72478986 72479027 -130606505 + AluJ/FRAM SINE Alu 227 267 -35 402 57 0 0 chr5 72479039 72479092 -130606440 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1753 139 46 26 chr5 72479113 72479415 -130606117 - AluJb SINE Alu -4 308 1 2532 149 81 25 chr5 72479424 72479790 -130605742 - L1MB3 LINE L1 0 6183 5839 360 0 0 0 chr5 72479790 72479830 -130605702 + (CA)n Simple_repeat Simple_repeat 2 41 0 2093 141 3 0 chr5 72479834 72480140 -130605392 - AluSp SINE Alu -6 307 1 2532 149 81 25 chr5 72480140 72480290 -130605242 - L1MB3 LINE L1 -346 5837 5633 1899 201 68 23 chr5 72480290 72480687 -130604845 - MLT2B1 LTR ERVL -105 415 1 1411 171 50 53 chr5 72480687 72481027 -130604505 - L1MB3 LINE L1 -565 5618 5280 * 38303 89 8 12 chr5 72480996 72487172 -130598360 - L1PA6 LINE L1 -2 6152 12 513 159 33 45 chr5 72487183 72487305 -130598227 - L1M LINE L1 -823 5323 5215 2129 176 55 5 chr5 72487330 72487710 -130597822 + MSTB LTR MaLR 1 399 -27 1389 195 25 63 chr5 72487710 72488118 -130597414 - AluJo SINE Alu 0 400 5 609 212 73 7 chr5 72488195 72488332 -130597200 + MLT1B LTR MaLR 26 171 -219 2174 105 3 7 chr5 72488339 72488633 -130596899 + AluSx SINE Alu 1 293 -19 1991 148 10 13 chr5 72488643 72488954 -130596578 + AluJo SINE Alu 3 312 0 258 56 0 0 chr5 72488990 72489026 -130596506 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 282 179 38 82 chr5 72491934 72492118 -130593414 + (CACAA)n Simple_repeat Simple_repeat 1 176 0 200 245 38 9 chr5 72492238 72492344 -130593188 + (CA)n Simple_repeat Simple_repeat 1 109 0 21 0 0 0 chr5 72493486 72493507 -130592025 + AT_rich Low_complexity Low_complexity 1 21 0 208 203 26 52 chr5 72496484 72496637 -130588895 + (TTGTG)n Simple_repeat Simple_repeat 2 150 0 21 0 0 0 chr5 72500835 72500856 -130584676 + GC_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 72502941 72502990 -130582542 + AT_rich Low_complexity Low_complexity 1 49 0 184 344 62 41 chr5 72505808 72506003 -130579529 + L2 LINE L2 2819 3017 -255 1421 101 0 19 chr5 72506013 72506222 -130579310 + AluSx SINE Alu 41 245 -67 526 171 128 16 chr5 72506474 72506661 -130578871 - Charlie1 DNA MER1_type -26 2735 2528 2913 154 118 17 chr5 72506712 72507373 -130578159 - L1MB4 LINE L1 0 6180 5453 2486 62 7 3 chr5 72507379 72507684 -130577848 - AluY SINE Alu -1 310 5 2009 121 7 10 chr5 72508702 72509000 -130576532 + AluSx SINE Alu 11 307 -5 211 241 0 37 chr5 72509237 72509291 -130576241 - MIR3 SINE MIR -35 173 122 598 231 26 0 chr5 72509292 72509409 -130576123 + FLAM_C SINE Alu 2 121 -22 634 175 0 0 chr5 72512320 72512417 -130573115 + AluSg/x SINE Alu 199 295 -15 830 118 0 7 chr5 72512424 72512559 -130572973 + (GGAGA)n Simple_repeat Simple_repeat 5 138 0 2894 116 15 22 chr5 72512864 72513323 -130572209 - L1MA4 LINE L1 0 6300 5845 578 188 161 0 chr5 72514459 72514571 -130570961 - FLAM_A SINE Alu -3 130 1 281 243 0 0 chr5 72514575 72514645 -130570887 - L1ME LINE L1 -556 5606 5537 1511 195 33 13 chr5 72514671 72514978 -130570554 - LTR16A LTR ERVL -16 434 122 851 254 89 2 chr5 72514980 72515390 -130570142 - L1ME LINE L1 -1299 4847 4243 818 159 0 15 chr5 72515844 72515976 -130569556 + FLAM_C SINE Alu 1 130 -13 4379 127 10 39 chr5 72516843 72516974 -130568558 - Tigger1 DNA MER2_type 0 2418 2285 2264 121 0 6 chr5 72516974 72517288 -130568244 - AluSx SINE Alu 0 312 1 4379 127 10 39 chr5 72517288 72517762 -130567770 - Tigger1 DNA MER2_type -133 2285 1835 1653 84 200 36 chr5 72517762 72518012 -130567520 + AluSg SINE Alu 1 291 -9 4379 127 10 39 chr5 72518012 72518123 -130567409 - Tigger1 DNA MER2_type -583 1835 1722 2165 101 0 0 chr5 72518150 72518426 -130567106 + AluSx SINE Alu 11 286 -26 225 0 0 0 chr5 72518429 72518454 -130567078 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 2488 68 0 0 chr5 72518454 72518747 -130566785 + AluSg SINE Alu 1 293 -17 800 200 177 23 chr5 72518933 72519226 -130566306 + L1ME3A LINE L1 5692 6021 -149 1156 186 43 5 chr5 72519906 72520116 -130565416 + MER20 DNA MER1_type 1 218 -1 1019 159 49 0 chr5 72520355 72520518 -130565014 - FRAM SINE Alu -6 170 1 216 0 0 0 chr5 72520685 72520709 -130564823 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 287 224 82 0 chr5 72521111 72521196 -130564336 - MLT1A2 LTR MaLR -281 93 2 * 912 245 83 38 chr5 72521196 72521481 -130564051 - MLT1G LTR MaLR -282 308 10 1903 118 14 7 chr5 72521492 72521772 -130563760 + L1MA1 LINE L1 6015 6296 -6 285 328 113 0 chr5 72521917 72522050 -130563482 - MIR SINE MIR -67 195 47 259 300 82 55 chr5 72522049 72522159 -130563373 + L2 LINE L2 3151 3263 -9 * 853 280 88 31 chr5 72522211 72523196 -130562336 + L1MC4 LINE L1 4915 5984 -180 911 163 0 0 chr5 72523960 72524101 -130561431 + AluJo SINE Alu 1 141 -171 21 36 0 0 chr5 72524137 72524165 -130561367 + AT_rich Low_complexity Low_complexity 1 28 0 2027 161 0 0 chr5 72524873 72525261 -130560271 - AluJb SINE Alu 0 388 1 2151 116 33 0 chr5 72525281 72525582 -130559950 - AluSx SINE Alu -1 311 1 1087 325 109 49 chr5 72526093 72527058 -130558474 + L2 LINE L2 2175 3185 -87 2489 21 42 0 chr5 72527064 72527350 -130558182 - AluY SINE Alu -13 298 1 188 263 35 0 chr5 72527403 72527460 -130558072 + L2 LINE L2 3255 3313 0 28 29 0 0 chr5 72527682 72527717 -130557815 + AT_rich Low_complexity Low_complexity 1 35 0 1586 139 19 8 chr5 72527720 72527979 -130557553 - AluSx SINE Alu -35 277 16 287 277 79 0 chr5 72528193 72528294 -130557238 - L1ME4a LINE L1 -58 6063 5955 2322 104 3 0 chr5 72528364 72528673 -130556859 - AluSp SINE Alu -3 310 1 1277 219 37 25 chr5 72528682 72529007 -130556525 - L1ME4a LINE L1 -303 5818 5490 1924 158 3 0 chr5 72529612 72529904 -130555628 - AluSx SINE Alu -18 294 2 182 341 8 56 chr5 72529971 72530097 -130555435 + MIR SINE MIR 62 181 -81 25 0 0 0 chr5 72530139 72530164 -130555368 + AT_rich Low_complexity Low_complexity 1 25 0 380 111 16 0 chr5 72530612 72530675 -130554857 + L1MB2 LINE L1 6078 6141 -30 1573 158 14 24 chr5 72530714 72531006 -130554526 - AluJo SINE Alu -8 304 16 338 74 19 0 chr5 72531035 72531089 -130554443 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 2057 133 0 0 chr5 72531090 72531376 -130554156 - AluSx SINE Alu -5 307 22 2328 124 5 24 chr5 72531772 72532142 -130553390 - L1MB2 LINE L1 -3 6168 5806 2374 204 30 56 chr5 72532294 72532867 -130552665 - MER92B LTR ERV1 -1 635 77 1963 136 7 0 chr5 72532867 72533171 -130552361 + AluSx SINE Alu 1 306 0 2374 204 30 56 chr5 72533171 72533225 -130552307 - MER92B LTR ERV1 -559 77 23 320 318 33 26 chr5 72533304 72533455 -130552077 + MLT1K LTR MaLR 111 262 -326 328 167 39 39 chr5 72533487 72533565 -130551967 + MLT1K LTR MaLR 456 533 -55 1530 165 0 8 chr5 72533872 72534121 -130551411 + AluJo SINE Alu 1 247 -65 21 0 0 0 chr5 72534227 72534248 -130551284 + AT_rich Low_complexity Low_complexity 1 21 0 1283 174 100 12 chr5 72534248 72534387 -130551145 - AluJo SINE Alu -30 282 157 180 0 0 0 chr5 72534387 72534407 -130551125 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1283 174 100 12 chr5 72534407 72534526 -130551006 - AluJo SINE Alu -155 157 1 398 252 138 8 chr5 72534856 72534979 -130550553 - L2 LINE L2 -8 3305 3167 1403 157 18 0 chr5 72535082 72535299 -130550233 + AluJb SINE Alu 84 304 -8 453 132 175 9 chr5 72535328 72535442 -130550090 + L1ME4a LINE L1 5985 6117 -4 2325 110 0 3 chr5 72536192 72536502 -130549030 - AluSq SINE Alu -4 309 1 2246 164 51 84 chr5 72536619 72537212 -130548320 - L1ME3 LINE L1 -2 6160 5588 357 277 212 18 chr5 72537220 72537498 -130548034 - L1MC4a LINE L1 -1659 6149 5818 2280 153 3 12 chr5 72537506 72537846 -130547686 - MER1B DNA MER1_type 0 337 1 630 263 93 19 chr5 72537938 72538197 -130547335 - L1ME3 LINE L1 -2277 5531 5254 1834 137 0 60 chr5 72538241 72538555 -130546977 - AluJo SINE Alu -17 295 1 189 245 245 0 chr5 72538617 72538670 -130546862 - L2 LINE L2 -8 3264 3199 503 308 25 0 chr5 72538791 72538950 -130546582 + L2 LINE L2 2327 2489 -825 224 244 263 35 chr5 72538981 72539297 -130546235 - L2 LINE L2 -637 2677 2290 276 247 90 22 chr5 72540138 72540227 -130545305 + MIR3 SINE MIR 2 96 -112 449 278 59 41 chr5 72540296 72540465 -130545067 - MLT1K LTR MaLR -410 178 7 723 135 9 0 chr5 72541017 72541128 -130544404 + AluJb SINE Alu 2 113 -199 276 35 69 121 chr5 72541128 72541186 -130544346 - MLT2A1 LTR ERVL 0 453 399 246 75 0 57 chr5 72541186 72541239 -130544293 + (TA)n Simple_repeat Simple_repeat 1 50 0 2768 88 46 5 chr5 72541242 72541630 -130543902 - MLT2A1 LTR ERVL -40 404 1 1216 165 0 0 chr5 72541633 72541821 -130543711 + AluJb SINE Alu 112 299 -13 392 296 14 35 chr5 72542026 72542168 -130543364 + MIR SINE MIR 124 262 0 209 256 167 0 chr5 72542168 72542246 -130543286 + MIR SINE MIR 123 213 -49 1811 138 14 3 chr5 72542249 72542532 -130543000 + AluSx SINE Alu 1 286 -26 21 0 0 0 chr5 72542595 72542616 -130542916 + AT_rich Low_complexity Low_complexity 1 21 0 264 304 39 0 chr5 72542827 72542929 -130542603 + MIR SINE MIR 59 164 -98 2340 91 3 0 chr5 72543099 72543396 -130542136 + AluSp SINE Alu 1 298 -15 614 273 74 9 chr5 72543436 72543652 -130541880 - MIR SINE MIR -28 234 5 1803 136 10 52 chr5 72543746 72543920 -130541612 - AluSx SINE Alu -17 295 138 2089 107 3 10 chr5 72543920 72544211 -130541321 - AluSc SINE Alu -20 289 1 1803 136 10 52 chr5 72544211 72544344 -130541188 - AluSx SINE Alu -174 138 1 2169 124 33 47 chr5 72544758 72545121 -130540411 - THE1B LTR MaLR 0 364 7 574 206 0 0 chr5 72545483 72545575 -130539957 + FLAM_C SINE Alu 26 117 -26 614 194 0 0 chr5 72545623 72545721 -130539811 + FRAM SINE Alu 1 92 -84 1121 12 49 0 chr5 72545739 72545901 -130539631 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 433 209 23 0 chr5 72545950 72546036 -130539496 - MER63 DNA MER1_type -83 753 40 914 194 18 6 chr5 72547073 72547238 -130538294 + MER5B DNA MER1_type 1 167 -11 234 0 0 0 chr5 72547261 72547287 -130538245 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 187 0 35 35 chr5 72547288 72547317 -130538215 + MER5B DNA MER1_type 150 178 0 416 335 63 0 chr5 72547552 72547773 -130537759 + L1ME LINE L1 5483 5717 -404 24 53 0 0 chr5 72547958 72547996 -130537536 + AT_rich Low_complexity Low_complexity 1 38 0 1832 135 14 14 chr5 72548002 72548299 -130537233 + AluJb SINE Alu 1 297 -15 454 234 54 0 chr5 72548876 72548987 -130536545 + MIR SINE MIR 120 236 -26 1914 127 14 41 chr5 72549198 72549528 -130536004 - AluSx SINE Alu 0 322 1 1230 164 27 0 chr5 72549602 72549827 -130535705 + Tigger1 DNA MER2_type 1 231 -2187 1447 193 21 14 chr5 72549837 72550117 -130535415 - AluJo SINE Alu -30 282 1 482 82 0 14 chr5 72550128 72550201 -130535331 + (TCC)n Simple_repeat Simple_repeat 2 73 0 489 231 9 0 chr5 72550201 72550309 -130535223 - FLAM_C SINE Alu -8 135 27 9936 103 19 42 chr5 72550310 72551826 -130533706 + Tigger1 DNA MER2_type 215 1692 -726 2311 99 0 0 chr5 72551826 72552120 -130533412 - AluSx SINE Alu -8 304 11 9936 103 19 42 chr5 72552120 72552257 -130533275 + Tigger1 DNA MER2_type 1692 1831 -587 1440 82 0 46 chr5 72552258 72552452 -130533080 - AluSg/x SINE Alu -19 293 109 406 89 0 0 chr5 72552452 72552508 -130533024 - Alu SINE Alu -254 56 1 3368 137 12 28 chr5 72552509 72552982 -130532550 + Tigger1 DNA MER2_type 1824 2286 -132 2277 121 0 6 chr5 72552982 72553296 -130532236 + AluSx SINE Alu 1 312 0 3368 137 12 28 chr5 72553296 72553427 -130532105 + Tigger1 DNA MER2_type 2286 2418 0 827 159 0 15 chr5 72554294 72554426 -130531106 - FLAM_C SINE Alu -13 130 1 712 253 89 2 chr5 72554880 72555290 -130530242 + L1ME LINE L1 4243 4847 -1299 1461 197 33 7 chr5 72555292 72555597 -130529935 + LTR16A LTR ERVL 122 434 -16 270 234 0 26 chr5 72555623 72555700 -130529832 + L1ME LINE L1 5537 5611 -551 557 129 12 0 chr5 72555724 72555809 -130529723 + FLAM_A SINE Alu 45 130 -12 2687 116 18 13 chr5 72556946 72557394 -130528138 + L1MA4 LINE L1 5845 6294 -6 875 114 0 7 chr5 72557707 72557847 -130527685 + (TCTCC)n Simple_repeat Simple_repeat 5 143 0 2087 148 0 3 chr5 72557854 72558152 -130527380 - AluSx SINE Alu -15 297 1 315 0 0 0 chr5 72558478 72558513 -130527019 + (TG)n Simple_repeat Simple_repeat 2 36 0 2165 75 44 0 chr5 72558651 72558946 -130526586 - AluY SINE Alu -1 310 3 627 48 0 0 chr5 72559008 72559091 -130526441 + (TC)n Simple_repeat Simple_repeat 2 84 0 180 286 0 0 chr5 72559100 72559142 -130526390 + L2 LINE L2 3213 3254 -18 1273 253 121 12 chr5 72559729 72560133 -130525399 - LTR16A LTR ERVL -2 448 1 918 315 51 52 chr5 72560834 72561036 -130524496 - MERVL LTR ERVL -807 4678 4477 2074 96 4 7 chr5 72561036 72561359 -130524173 + AluSg SINE Alu 1 322 0 918 315 51 52 chr5 72561359 72561901 -130523631 - MERVL LTR ERVL -1008 4477 3934 819 107 0 0 chr5 72562381 72562484 -130523048 + FLAM_C SINE Alu 11 113 -30 371 249 78 47 chr5 72563483 72564040 -130521492 + L1MC5 LINE L1 7019 7415 -393 1652 181 16 35 chr5 72564171 72564481 -130521051 - AluJo SINE Alu -8 304 1 352 260 32 45 chr5 72564483 72564637 -130520895 + L1MC5 LINE L1 7624 7775 -186 1905 142 0 79 chr5 72565015 72565345 -130520187 - AluJo SINE Alu -8 304 1 1679 158 17 34 chr5 72565362 72565660 -130519872 - AluJb SINE Alu -19 293 1 385 259 54 54 chr5 72565987 72566172 -130519360 + MIR SINE MIR 31 215 -47 238 304 205 22 chr5 72566892 72567116 -130518416 + L2 LINE L2 2712 2976 -338 1577 168 62 7 chr5 72567118 72567410 -130518122 - AluJb SINE Alu -1 311 4 21 0 0 0 chr5 72567412 72567433 -130518099 + AT_rich Low_complexity Low_complexity 1 21 0 487 267 133 25 chr5 72567439 72567679 -130517853 + L2 LINE L2 2982 3247 -66 1908 130 4 4 chr5 72567921 72568198 -130517334 + AluSx SINE Alu 1 277 -35 34 0 0 0 chr5 72568201 72568235 -130517297 + AT_rich Low_complexity Low_complexity 1 34 0 192 263 35 0 chr5 72568458 72568515 -130517017 - L2 LINE L2 0 3313 3255 2453 21 42 0 chr5 72568568 72568854 -130516678 + AluY SINE Alu 1 298 -13 1149 328 107 46 chr5 72568860 72569824 -130515708 - L2 LINE L2 -87 3185 2175 2176 113 33 0 chr5 72570336 72570636 -130514896 + AluSx SINE Alu 1 310 -2 1844 181 16 0 chr5 72570656 72571035 -130514497 + AluJb SINE Alu 1 384 0 277 160 217 19 chr5 72571584 72571690 -130513842 - L1ME4a LINE L1 -31 6090 5964 568 51 41 10 chr5 72571788 72571886 -130513646 + (TTC)n Simple_repeat Simple_repeat 1 101 0 2061 121 31 0 chr5 72571914 72572204 -130513328 - AluSx SINE Alu -7 305 7 471 322 112 37 chr5 72572776 72573416 -130512116 - L2 LINE L2 -25 3247 2538 2599 128 39 5 chr5 72573794 72574208 -130511324 - MSTA LTR MaLR 0 428 1 232 301 0 24 chr5 72574881 72574964 -130510568 + MLT1K LTR MaLR 471 551 -37 270 343 57 29 chr5 72574980 72575225 -130510307 - L3 LINE CR1 -176 1401 1150 217 354 177 0 chr5 72575240 72575336 -130510196 - L3 LINE CR1 -399 1178 1066 2179 202 62 17 chr5 72575492 72575981 -130509551 + MLT2B3 LTR ERVL 2 518 -36 511 53 27 0 chr5 72575981 72576056 -130509476 + (TCTA)n Simple_repeat Simple_repeat 3 79 0 2179 202 62 17 chr5 72576056 72576095 -130509437 + MLT2B3 LTR ERVL 518 554 0 2075 139 7 0 chr5 72576216 72576519 -130509013 + AluSx SINE Alu 1 305 -7 575 293 40 18 chr5 72576709 72576931 -130508601 - L3 LINE CR1 -571 1006 780 244 157 137 0 chr5 72577105 72577156 -130508376 - L2 LINE L2 0 3272 3215 2563 81 0 0 chr5 72577312 72577621 -130507911 + AluSq SINE Alu 1 309 -4 1982 115 3 37 chr5 72577666 72577962 -130507570 + AluSx SINE Alu 1 286 -26 225 0 0 0 chr5 72577965 72577990 -130507542 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 2475 68 0 0 chr5 72577990 72578283 -130507249 + AluSg SINE Alu 1 293 -17 809 189 174 15 chr5 72578491 72578761 -130506771 + L1ME3A LINE L1 5709 6021 -149 1077 181 43 5 chr5 72579442 72579652 -130505880 + MER20 DNA MER1_type 1 218 -1 1042 158 49 0 chr5 72579891 72580055 -130505477 - FRAM SINE Alu -5 171 1 180 0 0 0 chr5 72580222 72580242 -130505290 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2197 110 0 10 chr5 72581289 72581605 -130503927 - AluSc SINE Alu 0 309 1 540 258 102 11 chr5 72581779 72581965 -130503567 + MIR SINE MIR 7 209 -53 1923 151 3 3 chr5 72582037 72582349 -130503183 + AluJb SINE Alu 1 312 0 25 0 0 0 chr5 72582411 72582436 -130503096 + AT_rich Low_complexity Low_complexity 1 25 0 312 137 0 0 chr5 72582561 72582612 -130502920 + (CA)n Simple_repeat Simple_repeat 2 52 0 2291 88 3 0 chr5 72582612 72582909 -130502623 - AluYa5 SINE Alu -13 298 1 842 150 22 17 chr5 72582943 72583123 -130502409 - L1MB4 LINE L1 -1 6179 5999 1583 92 0 0 chr5 72583300 72583527 -130502005 + L1PB1 LINE L1 5923 6149 -2 188 86 29 0 chr5 72584203 72584238 -130501294 + (TA)n Simple_repeat Simple_repeat 1 36 0 410 218 0 0 chr5 72584259 72584346 -130501186 + AluJb SINE Alu 212 298 -14 1198 235 10 23 chr5 72584512 72584818 -130500714 - MLT1G LTR MaLR -286 304 3 228 352 0 0 chr5 72585018 72585089 -130500443 + MIR SINE MIR 188 258 -4 1486 201 0 11 chr5 72585303 72585571 -130499961 - AluJo SINE Alu -5 307 43 21 57 0 0 chr5 72586014 72586049 -130499483 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 72586470 72586492 -130499040 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 72587625 72587645 -130497887 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 233 237 13 92 chr5 72587765 72587841 -130497691 + MIR SINE MIR 40 109 -153 22 0 0 0 chr5 72588192 72588214 -130497318 + AT_rich Low_complexity Low_complexity 1 22 0 1876 151 3 38 chr5 72588482 72588801 -130496731 - AluSq SINE Alu -5 308 1 2051 126 0 17 chr5 72588828 72589130 -130496402 + AluSx SINE Alu 2 298 -14 456 254 131 26 chr5 72590309 72590478 -130495054 + MIR3 SINE MIR 2 183 -25 23 0 0 0 chr5 72590652 72590675 -130494857 + AT_rich Low_complexity Low_complexity 1 23 0 380 244 39 77 chr5 72590894 72590951 -130494581 - MIR SINE MIR -52 210 152 2645 51 0 0 chr5 72590951 72591262 -130494270 + AluY SINE Alu 1 311 0 380 244 39 77 chr5 72591262 72591360 -130494172 - MIR SINE MIR -110 152 61 285 51 0 0 chr5 72591372 72591536 -130493996 - AluSp/q SINE Alu 0 419 256 769 192 0 0 chr5 72591841 72591966 -130493566 + FRAM SINE Alu 1 124 -52 2377 56 10 10 chr5 72592284 72592589 -130492943 - AluY SINE Alu -6 305 1 23 54 0 0 chr5 72592761 72592798 -130492734 + AT_rich Low_complexity Low_complexity 1 37 0 232 284 0 15 chr5 72593063 72593130 -130492402 - MER94 DNA DNA -5 129 64 1770 174 3 3 chr5 72593146 72593428 -130492104 - AluJb SINE Alu -26 286 5 366 216 14 0 chr5 72593435 72593509 -130492023 - MER94 DNA DNA -59 75 1 778 182 0 14 chr5 72593580 72593723 -130491809 + FAM SINE Alu 25 165 -20 523 324 83 29 chr5 72593735 72593976 -130491556 - MIR SINE MIR 0 262 9 21 0 0 0 chr5 72594153 72594174 -130491358 + AT_rich Low_complexity Low_complexity 1 21 0 4157 134 42 1 chr5 72595297 72596012 -130489520 + Tigger2 DNA MER2_type 1 744 -1974 1073 153 91 21 chr5 72596074 72596315 -130489217 + Tigger2 DNA MER2_type 2461 2718 0 868 131 8 0 chr5 72596355 72596477 -130489055 - FLAM_C SINE Alu -20 123 1 180 0 0 0 chr5 72597598 72597618 -130487914 + (A)n Simple_repeat Simple_repeat 1 20 0 30 89 0 0 chr5 72598561 72598640 -130486892 + GC_rich Low_complexity Low_complexity 1 79 0 29 28 0 0 chr5 72598689 72598725 -130486807 + GC_rich Low_complexity Low_complexity 1 36 0 224 311 0 14 chr5 72598804 72598878 -130486654 + C-rich Low_complexity Low_complexity 4 76 0 210 105 0 0 chr5 72599098 72599136 -130486396 + (CGGA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr5 72600280 72600303 -130485229 + AT_rich Low_complexity Low_complexity 1 23 0 2304 119 3 0 chr5 72602623 72602933 -130482599 - AluSx SINE Alu -1 311 1 2248 78 0 10 chr5 72603305 72603601 -130481931 - AluY SINE Alu -18 293 1 1160 164 80 8 chr5 72604537 72604799 -130480733 - Charlie1 DNA MER1_type -145 2616 2336 2364 87 6 3 chr5 72604800 72605112 -130480420 - AluSp SINE Alu 0 313 1 21 0 0 0 chr5 72605610 72605631 -130479901 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 72605788 72605825 -130479707 + AT_rich Low_complexity Low_complexity 1 37 0 483 287 110 31 chr5 72606268 72606522 -130479010 - L2 LINE L2 -4 3309 3036 24 32 0 0 chr5 72606951 72606982 -130478550 + AT_rich Low_complexity Low_complexity 1 31 0 774 204 105 11 chr5 72607666 72607857 -130477675 - MER6B DNA MER2_type -1 209 1 288 281 141 8 chr5 72608259 72608380 -130477152 - MIR SINE MIR -77 185 49 1832 176 39 0 chr5 72608592 72608922 -130476610 - MER2 DNA MER2_type -1 343 1 3159 122 80 42 chr5 72609758 72610399 -130475133 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 72610481 72610506 -130475026 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 72610685 72610747 -130474785 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 2043 102 50 3 chr5 72610747 72611025 -130474507 - AluSc SINE Alu -18 291 1 2302 88 7 13 chr5 72611170 72611477 -130474055 - AluSx SINE Alu -7 305 1 1659 204 0 26 chr5 72611698 72612006 -130473526 - AluJb SINE Alu -12 300 1 3848 71 24 62 chr5 72614705 72615448 -130470084 - SVA Other Other -520 866 256 261 0 0 0 chr5 72615459 72615488 -130470044 + (GGGAGA)n Simple_repeat Simple_repeat 1 29 0 1657 170 21 7 chr5 72616649 72616931 -130468601 + AluJb SINE Alu 5 290 -22 310 231 19 19 chr5 72617128 72617232 -130468300 + L1ME2 LINE L1 951 1054 -5151 1714 258 106 23 chr5 72617241 72617636 -130467896 + L1ME2 LINE L1 1771 2132 -4083 2162 109 0 37 chr5 72617636 72617957 -130467575 + AluSx SINE Alu 3 311 -1 1714 258 106 23 chr5 72617957 72619114 -130466418 + L1ME2 LINE L1 2132 3419 -2796 334 264 5 20 chr5 72619341 72619494 -130466038 - MLT1H LTR MaLR -344 205 14 543 249 149 16 chr5 72619512 72619761 -130465771 - LTR40b LTR ERVL -1 461 180 648 240 146 11 chr5 72620099 72620374 -130465158 + L1ME2 LINE L1 5453 5764 -471 425 215 147 0 chr5 72620382 72620545 -130464987 + L1ME2 LINE L1 6037 6223 -10 276 143 0 0 chr5 72622523 72622572 -130462960 + L1MC5 LINE L1 7805 7853 -108 2101 122 7 0 chr5 72622594 72622890 -130462642 - AluSg SINE Alu -12 298 1 216 298 16 16 chr5 72622897 72622988 -130462544 + MER5B DNA MER1_type 56 133 -45 1666 260 154 44 chr5 72623125 72623853 -130461679 + L2 LINE L2 1626 2433 -881 277 222 111 26 chr5 72624171 72624288 -130461244 - MLT1L LTR MaLR -8 607 481 247 337 41 66 chr5 72624304 72624500 -130461032 - MLT1L LTR MaLR -62 553 363 1649 159 7 14 chr5 72624767 72624868 -130460664 + AluJb SINE Alu 17 117 -195 252 0 0 0 chr5 72624868 72624896 -130460636 + (CA)n Simple_repeat Simple_repeat 2 29 0 1649 159 7 14 chr5 72624896 72625070 -130460462 + AluJb SINE Alu 117 290 -22 1955 125 38 3 chr5 72625072 72625360 -130460172 + AluSx SINE Alu 3 300 -12 1680 184 3 17 chr5 72625589 72625888 -130459644 + AluJo SINE Alu 1 295 -17 1673 127 88 14 chr5 72626222 72626506 -130459026 + AluJb SINE Alu 1 305 -7 453 157 10 39 chr5 72627230 72627332 -130458200 + MER3 DNA MER1_type 111 209 0 355 228 32 73 chr5 72627753 72627876 -130457656 + MIR SINE MIR 119 236 -26 2203 68 43 7 chr5 72627887 72628167 -130457365 + AluY SINE Alu 1 290 -21 183 192 0 123 chr5 72628167 72628240 -130457292 + MIR SINE MIR 173 236 -26 1974 113 17 7 chr5 72628265 72628557 -130456975 - AluSx SINE Alu -17 295 1 942 196 29 25 chr5 72628645 72628890 -130456642 - MER96B DNA MER1_type? -171 246 1 2222 65 27 0 chr5 72629655 72629948 -130455584 - AluY SINE Alu -10 301 1 439 268 95 49 chr5 72631148 72631243 -130454289 - MER112 DNA MER1_type -6 254 165 673 179 92 6 chr5 72631243 72631416 -130454116 + MER53 DNA DNA 1 188 -1 439 268 95 49 chr5 72631416 72631563 -130453969 - MER112 DNA MER1_type -95 165 1 23 68 0 0 chr5 72632439 72632483 -130453049 + AT_rich Low_complexity Low_complexity 1 44 0 7297 147 41 25 chr5 72632684 72634914 -130450618 - L1MA8 LINE L1 -197 6094 3829 189 0 0 0 chr5 72635429 72635450 -130450082 + (CA)n Simple_repeat Simple_repeat 2 22 0 1993 106 18 4 chr5 72635459 72635733 -130449799 + AluSx SINE Alu 13 290 -22 258 56 0 0 chr5 72635733 72635769 -130449763 + (TA)n Simple_repeat Simple_repeat 2 37 0 42 20 0 0 chr5 72636018 72636067 -130449465 + AT_rich Low_complexity Low_complexity 1 49 0 1673 177 10 10 chr5 72636166 72636454 -130449078 + AluJb SINE Alu 1 288 -24 2306 101 0 0 chr5 72636684 72636980 -130448552 + AluSg SINE Alu 1 296 -14 767 77 10 0 chr5 72637059 72637163 -130448369 + FRAM SINE Alu 60 164 -12 2314 49 3 7 chr5 72637622 72637908 -130447624 - AluY SINE Alu -26 285 1 332 286 110 0 chr5 72638451 72638542 -130446990 - MIR SINE MIR -160 102 2 1882 167 3 7 chr5 72639508 72639814 -130445718 + AluJo SINE Alu 1 305 -7 347 151 23 81 chr5 72640134 72640220 -130445312 + L1MC4 LINE L1 6504 6584 -1458 470 185 0 22 chr5 72640235 72640327 -130445205 - Tigger5 DNA MER2_type 0 2323 2234 566 249 135 9 chr5 72640383 72640699 -130444833 + L1MC4 LINE L1 6619 6982 -1013 1707 200 89 75 chr5 72640766 72641339 -130444193 + L1MC4 LINE L1 7254 7838 -204 2229 80 31 3 chr5 72641339 72641625 -130443907 + AluY SINE Alu 1 294 -17 1707 200 89 75 chr5 72641625 72641692 -130443840 + L1MC4 LINE L1 7838 7903 -139 27 0 0 0 chr5 72641725 72641752 -130443780 + AT_rich Low_complexity Low_complexity 1 27 0 1727 162 24 7 chr5 72642443 72642739 -130442793 + AluJo SINE Alu 1 301 -11 640 262 37 16 chr5 72642961 72643152 -130442380 + Charlie1a DNA MER1_type 20 214 -1241 2166 97 7 7 chr5 72643178 72643477 -130442055 - AluSx SINE Alu -11 301 3 2282 123 3 0 chr5 72645432 72645742 -130439790 - AluSx SINE Alu -1 311 1 2248 78 0 10 chr5 72646114 72646410 -130439122 - AluY SINE Alu -18 293 1 1180 160 80 8 chr5 72647346 72647608 -130437924 - Charlie1 DNA MER1_type -145 2616 2336 2384 82 7 0 chr5 72647610 72647915 -130437617 - AluSp SINE Alu 0 313 7 1713 104 17 4 chr5 72647920 72648160 -130437372 + AluSc SINE Alu 56 298 -11 690 267 37 16 chr5 72648186 72648377 -130437155 - Charlie1a DNA MER1_type -1241 214 20 1727 162 24 7 chr5 72648599 72648895 -130436637 - AluJo SINE Alu -11 301 1 27 0 0 0 chr5 72649586 72649613 -130435919 + AT_rich Low_complexity Low_complexity 1 27 0 1984 201 89 75 chr5 72649644 72649713 -130435819 - L1MC4 LINE L1 -137 7905 7838 2238 80 31 3 chr5 72649713 72649999 -130435533 - AluY SINE Alu -17 294 1 1984 201 89 75 chr5 72649999 72650572 -130434960 - L1MC4 LINE L1 -204 7838 7254 435 259 150 11 chr5 72650582 72650955 -130434577 - L1MC4a LINE L1 -804 7004 6619 514 185 0 22 chr5 72651011 72651103 -130434429 + Tigger5 DNA MER2_type 2234 2323 0 382 151 23 81 chr5 72651118 72651204 -130434328 - L1MC4 LINE L1 -1458 6584 6504 1830 170 3 7 chr5 72651524 72651830 -130433702 - AluJo SINE Alu -7 305 1 249 323 20 30 chr5 72652635 72652734 -130432798 - L1MC4a LINE L1 -2196 5612 5515 322 286 110 0 chr5 72652796 72652887 -130432645 + MIR SINE MIR 2 102 -160 2372 45 3 7 chr5 72653430 72653716 -130431816 + AluY SINE Alu 1 285 -26 810 78 10 0 chr5 72654175 72654278 -130431254 - AluJo SINE Alu -13 299 196 242 235 132 15 chr5 72654278 72654346 -130431186 - AluJo SINE Alu -142 160 85 2309 101 0 0 chr5 72654357 72654653 -130430879 - AluSg SINE Alu -14 296 1 242 328 0 0 chr5 72654875 72654942 -130430590 - MER2 DNA MER2_type -12 333 267 2137 121 0 0 chr5 72654959 72655248 -130430284 + AluSg SINE Alu 1 289 -21 10770 27 7 133 chr5 72655312 72656898 -130428634 + SVA Other Other 1 1386 0 1265 151 5 15 chr5 72656909 72657114 -130428418 - MER2 DNA MER2_type -142 203 1 2402 72 0 0 chr5 72657308 72657599 -130427933 - AluY SINE Alu -20 291 1 241 261 84 101 chr5 72657747 72657866 -130427666 - MIR3 SINE MIR -78 130 14 1397 136 54 27 chr5 72658183 72658202 -130427330 - L1MC2 LINE L1 -1 6343 6326 2063 103 60 0 chr5 72658202 72658483 -130427049 + AluSx SINE Alu 1 298 -14 1397 136 54 27 chr5 72658483 72658721 -130426811 - L1MC2 LINE L1 -18 6326 6079 421 200 40 0 chr5 72658761 72658861 -130426671 + L1MCa LINE L1 2049 2152 -4274 4119 158 96 36 chr5 72659243 72659947 -130425585 - L1MB3 LINE L1 -2 6181 5409 1798 160 16 10 chr5 72659947 72660253 -130425279 - AluJb SINE Alu -4 308 1 4119 158 96 36 chr5 72660253 72660508 -130425024 - L1MB3 LINE L1 -774 5409 5170 22 56 0 0 chr5 72661242 72661278 -130424254 + AT_rich Low_complexity Low_complexity 1 36 0 3303 179 125 44 chr5 72661328 72661635 -130423897 - L1MD1 LINE L1 -2 6240 5959 1850 167 4 0 chr5 72661635 72661916 -130423616 + AluJb SINE Alu 1 282 -30 258 32 0 0 chr5 72661916 72661947 -130423585 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 3303 179 125 44 chr5 72661947 72662795 -130422737 - L1MD1 LINE L1 -282 5960 4996 1212 122 23 0 chr5 72662795 72662967 -130422565 - AluSg/x SINE Alu -22 288 113 2264 106 0 10 chr5 72663276 72663579 -130421953 + AluSq SINE Alu 1 300 -13 1485 165 21 70 chr5 72663702 72664029 -130421503 - AluJb SINE Alu -1 311 1 1897 158 0 0 chr5 72664343 72664634 -130420898 - AluSx SINE Alu -21 291 1 1081 192 118 0 chr5 72665155 72665400 -130420132 - L1MD3 LINE L1 -2 7993 7720 787 164 15 15 chr5 72665400 72665534 -130419998 - FLAM_C SINE Alu -1 142 9 2013 95 0 0 chr5 72665593 72665856 -130419676 - AluY SINE Alu -29 282 20 1732 165 35 0 chr5 72665863 72666179 -130419353 - L1MD3 LINE L1 -269 7726 7400 408 226 32 11 chr5 72666193 72666286 -130419246 - MLT1F1 LTR MaLR -472 95 1 308 173 187 2 chr5 72666286 72666366 -130419166 - L1MD3 LINE L1 -588 7270 7126 519 223 92 8 chr5 72666848 72666978 -130418554 + L2 LINE L2 3173 3313 0 836 205 0 0 chr5 72667917 72668073 -130417459 - FAM SINE Alu -7 42 1 1592 310 67 30 chr5 72668419 72669080 -130416452 - MER115 DNA AcHobo 0 693 9 2096 106 3 3 chr5 72670355 72670668 -130414864 + AluSx SINE Alu 1 313 0 2182 103 21 0 chr5 72670919 72671209 -130414323 + AluSx SINE Alu 1 296 -16 1341 208 43 12 chr5 72671322 72671577 -130413955 + Tigger7 DNA MER2_type 6 268 -2219 447 247 0 10 chr5 72671577 72671674 -130413858 + Tigger7 DNA MER2_type 2392 2487 0 1552 148 43 59 chr5 72671944 72672249 -130413283 - AluSx SINE Alu -11 301 2 294 128 0 0 chr5 72672479 72672518 -130413014 - Alu SINE Alu -262 40 2 307 285 68 68 chr5 72672589 72672730 -130412802 - L1ME LINE L1 -327 5794 5654 1949 158 29 63 chr5 72672730 72672766 -130412766 + MER47A DNA MER2_type 1 37 -2286 10597 48 5 58 chr5 72672766 72674248 -130411284 - SVA Other Other 0 1386 3 1949 158 29 63 chr5 72674248 72674590 -130410942 + MER47A DNA MER2_type 37 366 0 307 285 68 68 chr5 72674590 72674788 -130410744 - L1ME LINE L1 -466 5655 5455 360 194 0 129 chr5 72675235 72675390 -130410142 - MER20B DNA MER1_type -3 780 646 1899 211 113 23 chr5 72675520 72676042 -130409490 + L1ME2 LINE L1 5586 6154 -10 537 156 193 18 chr5 72676064 72676173 -130409359 - MER5B DNA MER1_type -50 128 1 682 224 190 30 chr5 72676174 72676469 -130409063 - MER20B DNA MER1_type -252 531 190 291 238 16 0 chr5 72676677 72676740 -130408792 + MER46C DNA MER2_type 2 65 -273 436 149 20 123 chr5 72676866 72677066 -130408466 + MER46C DNA MER2_type 80 338 0 1773 74 0 9 chr5 72678970 72679199 -130406333 + AluSq SINE Alu 86 312 -1 21 57 0 0 chr5 72679290 72679325 -130406207 + AT_rich Low_complexity Low_complexity 1 35 0 2337 91 0 31 chr5 72679350 72679669 -130405863 - AluY SINE Alu -2 309 1 287 315 67 20 chr5 72679925 72680074 -130405458 + MER5B DNA MER1_type 2 157 -21 422 310 121 57 chr5 72680262 72680312 -130405220 + L2 LINE L2 2647 2692 -621 2058 112 10 48 chr5 72680312 72680480 -130405052 - AluSx SINE Alu -10 302 150 279 0 0 0 chr5 72680480 72680511 -130405021 + (TG)n Simple_repeat Simple_repeat 2 32 0 2058 112 10 48 chr5 72680511 72680656 -130404876 - AluSx SINE Alu -162 150 1 422 310 121 57 chr5 72680656 72680954 -130404578 + L2 LINE L2 2692 2970 -343 2102 140 7 0 chr5 72680954 72681262 -130404270 - AluSx SINE Alu -2 310 1 422 310 121 57 chr5 72681262 72681478 -130404054 + L2 LINE L2 2970 3250 -63 5653 149 50 100 chr5 72681644 72681966 -130403566 + Tigger3b DNA MER2_type 1 338 -2690 2439 88 3 0 chr5 72681966 72682274 -130403258 + AluSp SINE Alu 1 309 -4 5653 149 50 100 chr5 72682274 72683247 -130402285 + Tigger3b DNA MER2_type 338 1231 0 747 271 37 44 chr5 72683464 72683737 -130401795 - MLT1F1 LTR MaLR -296 271 1 23 54 0 0 chr5 72684098 72684135 -130401397 + AT_rich Low_complexity Low_complexity 1 37 0 2076 114 3 3 chr5 72684135 72684424 -130401108 - AluSx SINE Alu -23 289 1 187 361 75 23 chr5 72685026 72685159 -130400373 - MIR SINE MIR -122 140 1 262 344 58 19 chr5 72685827 72685981 -130399551 + L2 LINE L2 2689 2848 -466 1437 170 74 28 chr5 72686150 72686433 -130399099 - AluJo SINE Alu -4 298 3 208 234 312 0 chr5 72686461 72686538 -130398994 + L2 LINE L2 3160 3260 -12 24 0 0 0 chr5 72687202 72687226 -130398306 + AT_rich Low_complexity Low_complexity 1 24 0 225 304 0 0 chr5 72687566 72687622 -130397910 + MER91 DNA MER1_type 134 189 -1 3062 55 18 16 chr5 72688588 72688971 -130396561 + L1PA5 LINE L1 5768 6151 -3 22 0 0 0 chr5 72688971 72688993 -130396539 + AT_rich Low_complexity Low_complexity 1 22 0 1148 151 0 27 chr5 72689511 72689696 -130395836 + AluJo SINE Alu 1 180 -132 358 328 81 17 chr5 72690073 72690247 -130395285 + LTR16C LTR ERVL 307 491 0 1069 246 68 71 chr5 72690297 72690585 -130394947 - L2 LINE L2 -1114 2200 1912 2016 132 14 0 chr5 72690585 72690866 -130394666 - AluSx SINE Alu -27 285 1 2012 139 0 7 chr5 72690869 72691164 -130394368 - AluSx SINE Alu -19 293 1 1069 246 68 71 chr5 72691164 72691404 -130394128 - L2 LINE L2 -1404 1910 1670 1762 163 14 17 chr5 72691750 72692045 -130393487 + AluSx SINE Alu 1 294 -18 7451 57 5 18 chr5 72692074 72693455 -130392077 - SVA Other Other -723 1386 256 369 0 0 0 chr5 72693466 72693507 -130392025 + (GGGAGA)n Simple_repeat Simple_repeat 1 41 0 1665 172 25 0 chr5 72694668 72694947 -130390585 + AluJb SINE Alu 5 290 -22 360 231 19 19 chr5 72695144 72695248 -130390284 + L1ME2 LINE L1 951 1054 -5151 1635 255 97 36 chr5 72695257 72695652 -130389880 + L1ME2 LINE L1 1771 2140 -4075 2134 112 0 37 chr5 72695652 72695973 -130389559 + AluSx SINE Alu 3 311 -1 1635 255 97 36 chr5 72695973 72697130 -130388402 + L1ME2 LINE L1 2140 3419 -2796 387 283 73 31 chr5 72697274 72697510 -130388022 - MLT1H LTR MaLR -252 297 14 645 241 145 35 chr5 72697528 72697818 -130387714 - LTR40a LTR ERVL -1 518 197 229 256 0 0 chr5 72697938 72697981 -130387551 - LTR40a LTR ERVL -475 44 2 821 223 155 21 chr5 72698115 72698406 -130387126 + L1ME2 LINE L1 5453 5782 -453 496 215 147 0 chr5 72698403 72698566 -130386966 + L1ME2 LINE L1 6037 6223 -10 * 290 143 0 0 chr5 72700543 72700592 -130384940 + L1MC5 LINE L1 7805 7853 -108 2082 122 7 0 chr5 72700614 72700910 -130384622 - AluSg SINE Alu -12 298 1 218 298 16 16 chr5 72700917 72701008 -130384524 + MER5B DNA MER1_type 56 133 -45 1659 260 154 44 chr5 72701145 72701873 -130383659 + L2 LINE L2 1626 2433 -881 326 214 103 32 chr5 72702182 72702308 -130383224 - MLT1L LTR MaLR 0 615 481 302 337 41 66 chr5 72702324 72702520 -130383012 - MLT1L LTR MaLR -62 553 363 1636 159 7 14 chr5 72702787 72702888 -130382644 + AluJb SINE Alu 17 117 -195 378 0 0 0 chr5 72702888 72702930 -130382602 + (CA)n Simple_repeat Simple_repeat 2 43 0 1636 159 7 14 chr5 72702930 72703104 -130382428 + AluJb SINE Alu 117 290 -22 1943 125 38 3 chr5 72703106 72703394 -130382138 + AluSx SINE Alu 3 300 -12 1651 184 3 17 chr5 72703623 72703922 -130381610 + AluJo SINE Alu 1 295 -17 206 231 0 0 chr5 72703950 72703989 -130381543 + (TG)n Simple_repeat Simple_repeat 2 40 0 1655 127 88 14 chr5 72704256 72704539 -130380993 + AluJb SINE Alu 1 304 -8 483 179 73 32 chr5 72705216 72705339 -130380193 + MER3 DNA MER1_type 82 209 0 355 228 32 73 chr5 72705760 72705883 -130379649 + MIR SINE MIR 119 236 -26 2200 68 43 7 chr5 72705894 72706174 -130379358 + AluY SINE Alu 1 290 -21 199 189 0 122 chr5 72706174 72706248 -130379284 + MIR SINE MIR 172 236 -26 2064 110 17 0 chr5 72706273 72706563 -130378969 - AluSx SINE Alu -17 295 1 1014 196 29 25 chr5 72706651 72706896 -130378636 - MER96B DNA MER1_type? -171 246 1 2223 65 27 0 chr5 72707661 72707954 -130377578 - AluY SINE Alu -10 301 1 502 268 95 49 chr5 72709154 72709249 -130376283 - MER112 DNA MER1_type -6 254 165 695 179 92 6 chr5 72709249 72709422 -130376110 + MER53 DNA DNA 1 188 -1 502 268 95 49 chr5 72709422 72709569 -130375963 - MER112 DNA MER1_type -95 165 1 23 68 0 0 chr5 72710445 72710489 -130375043 + AT_rich Low_complexity Low_complexity 1 44 0 7747 148 40 24 chr5 72710690 72712920 -130372612 - L1MA8 LINE L1 -197 6094 3829 189 0 0 0 chr5 72713435 72713456 -130372076 + (CA)n Simple_repeat Simple_repeat 2 22 0 1964 113 18 4 chr5 72713465 72713739 -130371793 + AluSx SINE Alu 13 290 -22 258 56 0 0 chr5 72713739 72713775 -130371757 + (TA)n Simple_repeat Simple_repeat 2 37 0 34 24 0 0 chr5 72714024 72714065 -130371467 + AT_rich Low_complexity Low_complexity 1 41 0 1888 167 10 3 chr5 72714122 72714427 -130371105 + AluJb SINE Alu 1 307 -5 1855 143 33 3 chr5 72714594 72714894 -130370638 + AluSq SINE Alu 1 309 -4 340 278 196 36 chr5 72714897 72715260 -130370272 - L1MC4 LINE L1 -143 7899 7479 31 68 0 0 chr5 72716652 72716711 -130368821 + AT_rich Low_complexity Low_complexity 1 59 0 249 33 0 0 chr5 72717298 72717328 -130368204 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 3608 86 1 5 chr5 72717328 72717828 -130367704 - L1PA8 LINE L1 -24 6148 5647 2287 211 58 7 chr5 72718743 72719327 -130366205 - MER90 LTR ERV1 0 614 1 1642 152 3 50 chr5 72719432 72719754 -130365778 - AluJo SINE Alu -5 307 1 267 152 0 0 chr5 72719879 72719925 -130365607 + (TG)n Simple_repeat Simple_repeat 1 46 0 1660 173 14 14 chr5 72719927 72720211 -130365321 - AluSx SINE Alu -28 284 1 1699 276 142 32 chr5 72720301 72721050 -130364482 - L2 LINE L2 -321 2992 2130 10083 36 6 8 chr5 72721050 72723068 -130362464 + L1PA4 LINE L1 4128 6155 0 1699 276 142 32 chr5 72723068 72723162 -130362370 - L2 LINE L2 -1183 2130 2048 187 370 152 0 chr5 72723176 72723268 -130362264 + L2 LINE L2 3134 3239 -33 202 299 125 21 chr5 72723286 72723430 -130362102 - L2 LINE L2 -945 2369 2211 2056 99 14 17 chr5 72723645 72723939 -130361593 + AluY SINE Alu 1 293 -18 458 172 68 32 chr5 72724430 72724559 -130360973 + L1ME LINE L1 5600 5731 -433 649 227 0 0 chr5 72725483 72725611 -130359921 - L1M4 LINE L1 -562 5612 5485 * 1559 225 36 40 chr5 72725609 72726103 -130359429 - L1MC4a LINE L1 -235 7573 7082 345 268 68 41 chr5 72726336 72726559 -130358973 + MER5C DNA MER1_type 1 324 0 2105 123 3 0 chr5 72726920 72727220 -130358312 + AluSx SINE Alu 7 307 -5 419 259 32 51 chr5 72727756 72727914 -130357618 - MIR3 SINE MIR -17 191 37 207 157 0 39 chr5 72728021 72728072 -130357460 + A-rich Low_complexity Low_complexity 2 50 0 877 182 27 58 chr5 72728470 72728695 -130356837 + MER20 DNA MER1_type 1 218 -1 26 82 0 0 chr5 72730254 72730315 -130355217 + AT_rich Low_complexity Low_complexity 1 61 0 663 257 66 0 chr5 72730841 72730993 -130354539 + MER58A DNA MER1_type 2 163 0 377 98 0 0 chr5 72731067 72731118 -130354414 + MER58A DNA MER1_type 174 224 0 1073 205 5 5 chr5 72731147 72731357 -130354175 + AluJo SINE Alu 85 294 -18 198 265 15 59 chr5 72731535 72731603 -130353929 + L2 LINE L2 3127 3191 -81 364 180 56 0 chr5 72731960 72732049 -130353483 - L1MB3 LINE L1 -3 6180 6087 4028 169 50 24 chr5 72732051 72732125 -130353407 - L1MA4 LINE L1 -281 6019 5948 1999 144 0 3 chr5 72732125 72732424 -130353108 - AluSx SINE Alu -14 298 1 4028 169 50 24 chr5 72732424 72733918 -130351614 - L1MA4 LINE L1 -352 5948 4405 510 88 81 0 chr5 72733946 72734094 -130351438 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2257 105 3 0 chr5 72734120 72734425 -130351107 - AluY SINE Alu -5 306 1 1381 172 14 7 chr5 72734425 72734704 -130350828 - L1MA4 LINE L1 -1732 4414 4134 29 28 0 0 chr5 72736657 72736693 -130348839 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 72737620 72737643 -130347889 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr5 72738950 72739000 -130346532 + AT_rich Low_complexity Low_complexity 1 50 0 2428 69 0 7 chr5 72739190 72739493 -130346039 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 72739992 72740013 -130345519 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 72740170 72740207 -130345325 + AT_rich Low_complexity Low_complexity 1 37 0 488 287 110 31 chr5 72740650 72740904 -130344628 - L2 LINE L2 -4 3309 3036 24 32 0 0 chr5 72741333 72741364 -130344168 + AT_rich Low_complexity Low_complexity 1 31 0 791 204 105 11 chr5 72742048 72742239 -130343293 - MER6B DNA MER2_type -1 209 1 292 281 141 8 chr5 72742641 72742762 -130342770 - MIR SINE MIR -77 185 49 1850 176 39 0 chr5 72742974 72743304 -130342228 - MER2 DNA MER2_type -1 343 1 3368 122 80 42 chr5 72744140 72744781 -130340751 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 72744863 72744888 -130340644 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 72745067 72745129 -130340403 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 2029 102 50 3 chr5 72745129 72745407 -130340125 - AluSc SINE Alu -18 291 1 2292 88 7 13 chr5 72745552 72745859 -130339673 - AluSx SINE Alu -7 305 1 1616 204 0 26 chr5 72746080 72746388 -130339144 - AluJb SINE Alu -12 300 1 212 186 47 0 chr5 72746851 72746894 -130338638 - L2 LINE L2 -4 3268 3224 1601 188 7 7 chr5 72747067 72747349 -130338183 + AluJo SINE Alu 1 282 -30 584 239 0 43 chr5 72747385 72747523 -130338009 - FLAM_A SINE Alu -1 132 1 282 394 21 16 chr5 72747550 72747743 -130337789 - L2 LINE L2 -339 2975 2782 335 241 58 115 chr5 72747758 72747884 -130337648 + MER117 DNA MER1_type 1 116 -81 463 258 15 15 chr5 72747884 72748016 -130337516 + MER94 DNA DNA 3 134 0 335 241 58 115 chr5 72748016 72748063 -130337469 + MER117 DNA MER1_type 116 164 -33 635 320 52 47 chr5 72748084 72748528 -130337004 - L2 LINE L2 -559 2755 2310 299 324 131 55 chr5 72748879 72749262 -130336270 - L2 LINE L2 -1176 2138 1727 2259 98 0 23 chr5 72749344 72749651 -130335881 + AluSx SINE Alu 1 300 -12 2016 121 11 0 chr5 72749814 72750094 -130335438 - AluSx SINE Alu -19 293 11 556 335 143 17 chr5 72750560 72751079 -130334453 + L2 LINE L2 2028 2611 -703 690 198 176 13 chr5 72751080 72751318 -130334214 + MER33 DNA MER1_type 1 277 -47 1633 183 23 23 chr5 72751331 72751632 -130333900 + AluJo SINE Alu 3 303 -9 207 314 70 96 chr5 72751695 72751851 -130333681 + L2 LINE L2 2610 2761 -553 334 309 52 116 chr5 72751934 72752280 -130333252 + L2 LINE L2 2947 3270 -2 614 154 41 8 chr5 72752459 72752582 -130332950 - L1MB7 LINE L1 -11 6173 6047 186 43 0 0 chr5 72754541 72754564 -130330968 + (TG)n Simple_repeat Simple_repeat 2 24 0 257 234 31 0 chr5 72754731 72754795 -130330737 + MIR SINE MIR 88 153 -109 245 174 22 0 chr5 72754826 72754872 -130330660 + Tigger4(Zombi) DNA MER2_type 2684 2730 -1 281 250 48 36 chr5 72755613 72755697 -130329835 - MIR SINE MIR -32 230 146 301 164 131 0 chr5 72755700 72755761 -130329771 + MER58A DNA MER1_type 154 222 -2 767 189 75 44 chr5 72757894 72758122 -130327410 - MER46A DNA MER2_type 0 236 2 352 216 14 14 chr5 72759924 72759998 -130325534 + Tigger3(Golem) DNA MER2_type 1 74 -2955 2211 105 0 0 chr5 72760000 72760294 -130325238 + AluSx SINE Alu 1 294 -18 576 215 23 0 chr5 72760312 72760442 -130325090 + AluJb SINE Alu 1 133 -179 1694 173 0 13 chr5 72760450 72760750 -130324782 + AluJo SINE Alu 1 296 -16 316 136 0 0 chr5 72760752 72760796 -130324736 + Tigger3(Golem) DNA MER2_type 70 113 -2916 1020 127 9 241 chr5 72760800 72761132 -130324400 + Tigger3(Golem) DNA MER2_type 2775 3029 0 2461 200 11 4 chr5 72762465 72762986 -130322546 - L1MB7 LINE L1 0 6184 5660 276 146 0 0 chr5 72763018 72763059 -130322473 + L1M4 LINE L1 5525 5565 -613 231 264 0 0 chr5 72763091 72763144 -130322388 + MER3 DNA MER1_type 38 90 -119 * 241 245 0 0 chr5 72763101 72763150 -130322382 - Charlie5 DNA MER1_type -2403 209 161 246 350 43 21 chr5 72763708 72763848 -130321684 - L2 LINE L2 -444 2870 2728 28 48 0 0 chr5 72764118 72764160 -130321372 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5 72764339 72764371 -130321161 + AT_rich Low_complexity Low_complexity 1 32 0 307 301 168 25 chr5 72764509 72764705 -130320827 + MIR SINE MIR 19 242 -20 284 248 79 50 chr5 72764955 72765056 -130320476 - MIR SINE MIR 0 262 159 2809 3 0 3 chr5 72765749 72766061 -130319471 - AluYa5 SINE Alu 0 311 1 1898 151 0 10 chr5 72767126 72767425 -130318107 + AluJb SINE Alu 1 296 -16 1553 190 35 3 chr5 72767441 72767731 -130317801 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr5 72768011 72768032 -130317500 + AT_rich Low_complexity Low_complexity 1 21 0 291 335 106 39 chr5 72771553 72771941 -130313591 - L2 LINE L2 -561 2753 2340 28 71 0 0 chr5 72772588 72772644 -130312888 + AT_rich Low_complexity Low_complexity 1 56 0 635 286 54 20 chr5 72772674 72772877 -130312655 + MIR SINE MIR 53 262 0 31 58 0 0 chr5 72772985 72773037 -130312495 + AT_rich Low_complexity Low_complexity 1 52 0 43603 40 5 2 chr5 72773064 72779196 -130306336 - L1PA4 LINE L1 -3 6152 3 402 249 58 67 chr5 72779848 72780047 -130305485 - MIR SINE MIR -1 261 66 864 133 0 16 chr5 72780381 72780509 -130305023 - FLAM_C SINE Alu -17 126 1 441 0 0 0 chr5 72781101 72781150 -130304382 + (TG)n Simple_repeat Simple_repeat 2 50 0 290 304 22 0 chr5 72781182 72781274 -130304258 - MIR SINE MIR -110 152 59 186 71 0 0 chr5 72782006 72782034 -130303498 + (A)n Simple_repeat Simple_repeat 1 28 0 831 164 0 0 chr5 72783269 72783403 -130302129 + AluJo SINE Alu 87 220 -92 284 102 61 20 chr5 72783403 72783452 -130302080 + AluJo SINE Alu 86 136 -166 1138 210 112 4 chr5 72783535 72783658 -130301874 + AluJo SINE Alu 1 109 -193 219 69 0 0 chr5 72783658 72783687 -130301845 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1138 210 112 4 chr5 72783687 72783830 -130301702 + AluJo SINE Alu 109 296 -6 2205 89 7 0 chr5 72785511 72785832 -130299700 - AluSq SINE Alu 0 323 1 22 0 0 0 chr5 72786535 72786557 -130298975 + AT_rich Low_complexity Low_complexity 1 22 0 1528 169 3 54 chr5 72786561 72786856 -130298676 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr5 72786859 72786882 -130298650 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 72787208 72787232 -130298300 + AT_rich Low_complexity Low_complexity 1 24 0 1766 161 0 35 chr5 72789369 72789679 -130295853 - AluJo SINE Alu -13 299 1 23 54 0 0 chr5 72792443 72792480 -130293052 + AT_rich Low_complexity Low_complexity 1 37 0 1042 40 0 0 chr5 72792537 72792663 -130292869 + AluY SINE Alu 175 300 -11 320 290 0 14 chr5 72793007 72793076 -130292456 + MIR SINE MIR 12 79 -183 23 0 0 0 chr5 72793076 72793099 -130292433 + AT_rich Low_complexity Low_complexity 1 23 0 279 287 35 0 chr5 72793099 72793214 -130292318 - L1MC4 LINE L1 -2 8040 7922 447 87 0 0 chr5 72793254 72793323 -130292209 + (CA)n Simple_repeat Simple_repeat 2 70 0 496 299 43 12 chr5 72793364 72793528 -130292004 + MIR SINE MIR 84 252 -10 481 288 28 34 chr5 72793678 72793855 -130291677 - MER5B DNA MER1_type -1 177 2 24 32 0 0 chr5 72794923 72794954 -130290578 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 72796484 72796513 -130289019 + AT_rich Low_complexity Low_complexity 1 29 0 2573 49 0 0 chr5 72798545 72798850 -130286682 - AluY SINE Alu -6 305 1 1803 178 7 0 chr5 72799628 72799932 -130285600 + AluJb SINE Alu 1 306 -6 255 289 148 0 chr5 72800063 72800198 -130285334 + HAL1 LINE L1 1611 1765 -742 739 192 17 0 chr5 72800322 72800442 -130285090 - FLAM_C SINE Alu -19 124 3 2265 117 0 0 chr5 72800455 72800763 -130284769 - AluSp SINE Alu -5 308 1 639 318 77 52 chr5 72800928 72801384 -130284148 - L1ME LINE L1 -392 5770 5315 2140 136 0 16 chr5 72801423 72801740 -130283792 - AluSx SINE Alu 0 312 1 345 286 87 91 chr5 72801783 72802014 -130283518 - L1ME LINE L1 -913 5233 5004 311 288 57 92 chr5 72802200 72802481 -130283051 + HAL1b LINE L1 310 580 -768 24 32 0 0 chr5 72802960 72802991 -130282541 + AT_rich Low_complexity Low_complexity 1 31 0 312 303 48 42 chr5 72803395 72803560 -130281972 - L1ME4a LINE L1 -192 5929 5764 320 280 38 89 chr5 72803707 72804093 -130281439 + L1MC4a LINE L1 6264 6703 -1190 2030 121 3 27 chr5 72804103 72804400 -130281132 - AluSx SINE Alu -21 291 2 36330 62 16 10 chr5 72804427 72809018 -130276514 + L1P LINE L1 8 4627 -1519 1562 11 0 0 chr5 72809118 72809292 -130276240 - L1P LINE L1 -2022 4124 3951 9615 31 14 0 chr5 72809292 72811191 -130274341 + L1PA3 LINE L1 4276 6152 -3 1311 189 31 100 chr5 72811223 72811582 -130273950 + L1MC5 LINE L1 6624 6957 -1004 2117 131 0 0 chr5 72811585 72811875 -130273657 - AluSx SINE Alu -21 291 2 2383 121 98 20 chr5 72811892 72812289 -130273243 - MSTA LTR MaLR 0 428 1 581 247 190 23 chr5 72812309 72812609 -130272923 + L1MC5 LINE L1 7387 7736 -225 1866 197 111 2 chr5 72812620 72813036 -130272496 + MLT1C LTR MaLR 7 467 0 507 230 34 34 chr5 72813037 72813215 -130272317 + L1MC5 LINE L1 7749 7926 -35 1714 161 10 20 chr5 72813688 72813980 -130271552 + AluJb SINE Alu 1 289 -23 316 248 89 57 chr5 72814018 72814175 -130271357 + MIR SINE MIR 51 212 -50 396 215 43 11 chr5 72815509 72815602 -130269930 + MIR SINE MIR 72 167 -95 216 97 0 0 chr5 72815647 72815678 -130269854 + (TTA)n Simple_repeat Simple_repeat 1 31 0 283 119 90 75 chr5 72815718 72815785 -130269747 + L2 LINE L2 3246 3313 0 2205 96 7 0 chr5 72817362 72817655 -130267877 + AluSx SINE Alu 1 295 -17 8112 111 34 15 chr5 72817791 72818997 -130266535 + Tigger3b DNA MER2_type 3 1231 0 2714 188 110 33 chr5 72819141 72819293 -130266239 - MER63C DNA MER1_type -130 930 791 2918 62 6 6 chr5 72819293 72819649 -130265883 + L1PA8 LINE L1 5803 6158 -14 2714 188 110 33 chr5 72819649 72820124 -130265408 - MER63C DNA MER1_type -269 791 255 637 281 83 4 chr5 72820230 72820458 -130265074 + MIR SINE MIR 1 246 -16 564 259 31 31 chr5 72821019 72821181 -130264351 - MER5B DNA MER1_type -2 176 15 189 409 16 16 chr5 72821165 72821351 -130264181 + L2 LINE L2 2563 2748 -566 * 2437 148 40 51 chr5 72821760 72822213 -130263319 + MLT1C LTR MaLR 20 467 0 453 162 14 0 chr5 72823016 72823090 -130262442 + MER116 DNA Mariner 1 75 -5 378 261 65 29 chr5 72823094 72823232 -130262300 + L2 LINE L2 3165 3307 -6 253 299 0 0 chr5 72823300 72823377 -130262155 + L1 LINE L1 4943 5019 -1127 569 298 32 52 chr5 72823408 72823660 -130261872 - L2 LINE L2 -109 3163 2917 235 350 19 10 chr5 72825896 72825999 -130259533 - MIR SINE MIR -16 246 143 1610 238 174 49 chr5 72826522 72826744 -130258788 + L2 LINE L2 37 230 -3084 2117 131 7 0 chr5 72826744 72827049 -130258483 + AluSq SINE Alu 1 307 -6 1610 238 174 49 chr5 72827049 72827581 -130257951 + L2 LINE L2 230 885 -2429 1583 260 66 64 chr5 72827587 72827947 -130257585 + L2 LINE L2 2317 2675 -638 2217 115 3 6 chr5 72827947 72828260 -130257272 + AluSx SINE Alu 1 312 0 1583 260 66 64 chr5 72828260 72828892 -130256640 + L2 LINE L2 2675 3308 -5 200 308 0 0 chr5 72828925 72828977 -130256555 - MIR SINE MIR -152 110 59 1050 198 25 10 chr5 72829178 72829380 -130256152 - MER58A DNA MER1_type -19 205 1 430 313 88 0 chr5 72829495 72829677 -130255855 + MIR SINE MIR 48 245 -17 2004 108 0 4 chr5 72830916 72831185 -130254347 - AluSx SINE Alu -12 300 33 2328 222 122 35 chr5 72831207 72831919 -130253613 - MER21B LTR ERV1 -61 802 29 2217 85 24 7 chr5 72832024 72832318 -130253214 - AluSq SINE Alu -14 299 1 1866 137 0 30 chr5 72832353 72832653 -130252879 + AluJo SINE Alu 1 291 -21 207 0 0 0 chr5 72832857 72832880 -130252652 + (TTG)n Simple_repeat Simple_repeat 2 24 0 515 261 168 0 chr5 72833077 72833238 -130252294 - MER5A DNA MER1_type 0 189 2 501 213 181 0 chr5 72833250 72833405 -130252127 + MER5A DNA MER1_type 7 189 0 523 219 77 55 chr5 72834574 72834757 -130250775 - MIR SINE MIR -30 232 46 228 111 0 0 chr5 72835253 72835289 -130250243 + (CA)n Simple_repeat Simple_repeat 1 36 0 194 167 0 0 chr5 72835773 72835803 -130249729 - L2 LINE L2 -19 3294 3265 455 288 24 16 chr5 72835810 72835935 -130249597 - MIR SINE MIR -111 151 26 470 301 36 44 chr5 72836314 72836563 -130248969 + MLT1L LTR MaLR 368 614 -1 613 186 0 0 chr5 72836781 72836883 -130248649 + U13 snRNA snRNA 1 102 -2 28 61 0 0 chr5 72836887 72836936 -130248596 + AT_rich Low_complexity Low_complexity 1 49 0 232 200 0 0 chr5 72837090 72837135 -130248397 + L1ME4a LINE L1 5386 5430 -691 964 236 113 4 chr5 72837196 72837471 -130248061 - MLT1H LTR MaLR -236 313 9 231 247 0 25 chr5 72837513 72837594 -130247938 + (TA)n Simple_repeat Simple_repeat 1 79 0 1976 246 106 52 chr5 72837624 72837979 -130247553 + L1ME3A LINE L1 5335 5669 -501 2108 128 0 0 chr5 72837979 72838268 -130247264 - AluSx SINE Alu -19 293 5 1976 246 106 52 chr5 72838268 72838312 -130247220 + L1ME3A LINE L1 5669 5709 -461 1671 154 173 6 chr5 72838312 72838624 -130246908 - MER47A DNA MER2_type -2 364 1 1976 246 106 52 chr5 72838624 72838762 -130246770 + L1ME3A LINE L1 5709 5838 -332 2528 162 23 21 chr5 72838762 72839195 -130246337 + Tigger2a DNA MER2_type 1 434 0 1976 246 106 52 chr5 72839195 72839432 -130246100 + L1ME3A LINE L1 5838 6153 -17 203 349 67 70 chr5 72841293 72841503 -130244029 - L2 LINE L2 0 3272 3062 1585 205 150 35 chr5 72841503 72841956 -130243576 + MLT1D LTR MaLR 1 505 0 203 349 67 70 chr5 72841956 72842029 -130243503 - L2 LINE L2 -210 3062 2990 409 133 0 0 chr5 72842081 72842141 -130243391 + U2 snRNA snRNA 1 60 -128 200 255 94 66 chr5 72842217 72842323 -130243209 - L2 LINE L2 -534 2780 2672 1029 263 146 31 chr5 72842332 72842912 -130242620 + L2 LINE L2 2479 3176 -137 2516 120 94 8 chr5 72842912 72843304 -130242228 + MSTB LTR MaLR 1 426 0 1029 263 146 31 chr5 72843304 72843460 -130242072 + L2 LINE L2 3176 3313 0 287 301 11 0 chr5 72843915 72844008 -130241524 + L1ME4a LINE L1 5522 5615 -506 264 218 18 0 chr5 72844028 72844083 -130241449 + L1ME4a LINE L1 5959 6014 -107 425 218 129 41 chr5 72844123 72844270 -130241262 - MLT1J2 LTR MaLR -84 366 207 299 216 0 14 chr5 72844464 72844538 -130240994 + L1ME4a LINE L1 6048 6120 -1 207 139 0 0 chr5 72844540 72844576 -130240956 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 22 0 0 0 chr5 72844630 72844652 -130240880 + AT_rich Low_complexity Low_complexity 1 22 0 33044 105 13 61 chr5 72844671 72850537 -130234995 + L1P2 LINE L1 12 5587 -567 5836 61 0 3 chr5 72850537 72851218 -130234314 + L1PA7 LINE L1 5461 6150 -4 432 216 40 32 chr5 72851288 72851413 -130234119 - L1ME3A LINE L1 -144 6026 5901 3368 199 5 2 chr5 72851586 72852178 -130233354 + Tigger7 DNA MER2_type 2 595 -138 497 173 0 0 chr5 72852178 72852253 -130233279 + Tigger7 DNA MER2_type 2512 2586 -1 334 305 98 20 chr5 72852395 72852602 -130232930 + L1ME4a LINE L1 5547 5777 -344 2471 161 19 5 chr5 72852602 72853030 -130232502 - Tigger2a DNA MER2_type 0 434 1 334 305 98 20 chr5 72853030 72853068 -130232464 + L1ME4a LINE L1 5777 5811 -310 281 29 0 0 chr5 72853106 72853140 -130232392 - HSMAR1 DNA Mariner -1253 34 1 275 252 114 8 chr5 72853216 72853347 -130232185 + L1ME4a LINE L1 5970 6114 -7 293 255 211 31 chr5 72853368 72853529 -130232003 + L1ME4a LINE L1 5838 6027 -94 649 209 30 43 chr5 72854342 72854577 -130230955 - L1ME LINE L1 -5055 1015 784 1584 173 3 43 chr5 72854748 72855048 -130230484 + AluJo SINE Alu 1 288 -24 3543 231 60 24 chr5 72855069 72856215 -130229317 + L1MDa LINE L1 1063 2250 -4290 2169 98 31 0 chr5 72856366 72856653 -130228879 - AluSc SINE Alu -13 296 1 313 243 136 10 chr5 72856836 72856939 -130228593 - MIR SINE MIR -34 228 113 2169 125 0 7 chr5 72857169 72857473 -130228059 + AluSx SINE Alu 1 302 -10 416 274 25 70 chr5 72858153 72858394 -130227138 - MLT1K LTR MaLR -6 582 353 1589 221 92 48 chr5 72860259 72860683 -130224849 + MER21B LTR ERV1 1 539 -392 832 145 0 16 chr5 72860712 72860836 -130224696 - FLAM_C SINE Alu -16 127 6 1815 184 65 27 chr5 72860836 72861237 -130224295 + MER21B LTR ERV1 429 844 -19 265 272 73 85 chr5 72861267 72861513 -130224019 + L2 LINE L2 2325 2567 -747 254 233 22 44 chr5 72861525 72861615 -130223917 - MER112 DNA MER1_type -171 89 2 632 286 137 0 chr5 72861644 72861892 -130223640 + L2 LINE L2 2810 3091 -222 2053 166 28 14 chr5 72861898 72862254 -130223278 + MLT1A1 LTR MaLR 2 362 -3 2286 183 29 11 chr5 72862477 72862919 -130222613 + MLT1C LTR MaLR 6 455 -12 22 35 0 0 chr5 72863544 72863573 -130221959 + AT_rich Low_complexity Low_complexity 1 29 0 437 284 30 65 chr5 72863602 72863803 -130221729 + MIR3 SINE MIR 2 195 -13 579 314 58 0 chr5 72864002 72864174 -130221358 + MER91A DNA MER1_type 15 196 0 22 0 0 0 chr5 72864540 72864562 -130220970 + AT_rich Low_complexity Low_complexity 1 22 0 1454 94 0 5 chr5 72864563 72864776 -130220756 - L1MA1 LINE L1 0 6302 6091 708 172 9 9 chr5 72865200 72865316 -130220216 + MER69 DNA AcHobo 8 123 -1103 1916 239 82 53 chr5 72865383 72866116 -130219416 + L1MEc LINE L1 36 789 -5607 1078 273 79 25 chr5 72866159 72866803 -130218729 + L1MEc LINE L1 990 1668 -4728 2386 140 31 3 chr5 72866807 72867192 -130218340 + MER57A LTR ERV1 8 403 0 2162 240 42 42 chr5 72867192 72868133 -130217399 + L1MEc LINE L1 1667 2575 -3640 1383 219 27 30 chr5 72868133 72868434 -130217098 + AluJo SINE Alu 1 300 -12 2162 240 42 42 chr5 72868434 72868448 -130217084 + L1MEc LINE L1 2575 2588 -3627 * 22152 144 48 8 chr5 72868436 72870681 -130214851 + L1M1 LINE L1 13 2167 -5398 2335 84 0 0 chr5 72870681 72870980 -130214552 + AluY SINE Alu 1 299 -12 22152 144 48 8 chr5 72870980 72871321 -130214211 + L1M1 LINE L1 2167 2493 -5072 2319 91 3 0 chr5 72871321 72871618 -130213914 + AluY SINE Alu 1 298 -13 22152 144 48 8 chr5 72871618 72875575 -130209957 + L1M1 LINE L1 2493 6820 -745 660 289 141 29 chr5 72875622 72876006 -130209526 + L2 LINE L2 1925 2351 -963 879 192 0 0 chr5 72876011 72876157 -130209375 + FRAM SINE Alu 1 144 -32 225 0 0 0 chr5 72876157 72876182 -130209350 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1611 233 100 39 chr5 72876295 72876865 -130208667 + MLT1E2 LTR MaLR 1 590 -64 6292 170 55 30 chr5 72876886 72877103 -130208429 + L1MA3 LINE L1 2450 2660 -3645 2082 122 7 0 chr5 72877103 72877399 -130208133 + AluSx SINE Alu 12 309 -3 6292 170 55 30 chr5 72877399 72877711 -130207821 + L1MA3 LINE L1 2660 2963 -3342 2242 106 3 0 chr5 72877711 72878004 -130207528 + AluSx SINE Alu 1 294 -18 6292 170 55 30 chr5 72878004 72879318 -130206214 + L1MA3 LINE L1 2963 4242 -2063 694 190 0 0 chr5 72879318 72879457 -130206075 + FLAM_A SINE Alu 1 139 0 6292 170 55 30 chr5 72879457 72879694 -130205838 + L1MA3 LINE L1 4242 6305 0 13934 123 55 16 chr5 72879952 72880715 -130204817 - Tigger1 DNA MER2_type 0 2418 1687 1916 152 10 3 chr5 72880715 72881024 -130204508 - AluSx SINE Alu -1 311 1 13934 123 55 16 chr5 72881024 72882564 -130202968 - Tigger1 DNA MER2_type -731 1687 24 2081 122 17 0 chr5 72882569 72882863 -130202669 + AluSx SINE Alu 1 299 -13 2216 131 0 0 chr5 72883463 72883775 -130201757 + AluSx SINE Alu 1 312 0 189 74 0 0 chr5 72883784 72883811 -130201721 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 21 71 0 0 chr5 72884895 72884937 -130200595 + AT_rich Low_complexity Low_complexity 1 42 0 1716 197 0 10 chr5 72885139 72885433 -130200099 + AluJo SINE Alu 2 292 -20 24 32 0 0 chr5 72885529 72885560 -130199972 + AT_rich Low_complexity Low_complexity 1 31 0 236 268 0 0 chr5 72886669 72886725 -130198807 + (CA)n Simple_repeat Simple_repeat 1 56 0 269 150 150 0 chr5 72889717 72889777 -130195755 + MIR SINE MIR 184 252 -10 28 48 0 0 chr5 72890188 72890230 -130195302 + AT_rich Low_complexity Low_complexity 1 42 0 377 197 191 28 chr5 72890786 72890964 -130194568 + L1MC4a LINE L1 5918 6124 -1684 441 271 141 27 chr5 72891113 72891375 -130194157 + L1MC4a LINE L1 4232 4523 -1623 280 163 0 0 chr5 72891378 72891421 -130194111 + 5S rRNA rRNA 1 43 -78 850 279 77 32 chr5 72891680 72892699 -130192833 + L1MC4a LINE L1 4754 5424 -774 22 88 0 0 chr5 72892867 72892924 -130192608 + AT_rich Low_complexity Low_complexity 1 57 0 419 330 70 15 chr5 72894457 72894657 -130190875 + MIR SINE MIR 49 259 -3 23 68 0 0 chr5 72894701 72894745 -130190787 + AT_rich Low_complexity Low_complexity 1 44 0 2213 109 3 19 chr5 72894870 72895181 -130190351 + AluSx SINE Alu 1 306 -6 2019 139 3 0 chr5 72895310 72895597 -130189935 + AluSx SINE Alu 1 288 -24 478 240 27 34 chr5 72896071 72896217 -130189315 + MIR SINE MIR 117 261 -1 183 283 0 0 chr5 72897169 72897268 -130188264 + CT-rich Low_complexity Low_complexity 1 99 0 213 237 0 0 chr5 72897331 72897390 -130188142 + CT-rich Low_complexity Low_complexity 5 63 0 1052 178 29 62 chr5 72898489 72898730 -130186802 - MER46A DNA MER2_type -3 233 1 799 276 24 20 chr5 72898907 72899153 -130186379 + MIR SINE MIR 6 252 -10 1846 140 3 47 chr5 72899329 72899650 -130185882 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr5 72899905 72899928 -130185604 + AT_rich Low_complexity Low_complexity 1 23 0 1669 157 8 0 chr5 72901254 72901509 -130184023 + AluJb SINE Alu 18 274 -38 27 62 0 0 chr5 72903042 72903090 -130182442 + AT_rich Low_complexity Low_complexity 1 48 0 456 288 16 16 chr5 72903919 72904044 -130181488 + MIR3 SINE MIR 74 198 -10 2716 218 59 18 chr5 72906143 72906768 -130178764 + MER82 DNA MER2_type 3 653 0 227 143 122 0 chr5 72906852 72906901 -130178631 - MIR SINE MIR -63 199 145 803 254 33 21 chr5 72907304 72907544 -130177988 + L2 LINE L2 2673 2915 -399 2220 79 14 0 chr5 72907867 72908157 -130177375 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 72908869 72908891 -130176641 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 72909876 72909904 -130175628 + AT_rich Low_complexity Low_complexity 1 28 0 255 103 0 0 chr5 72911717 72911756 -130173776 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 2606 41 0 22 chr5 72915855 72916171 -130169361 + AluY SINE Alu 2 310 -1 251 326 128 20 chr5 72916353 72916549 -130168983 + L2 LINE L2 2244 2460 -854 848 285 76 21 chr5 72916553 72916841 -130168691 + MLT1I LTR MaLR 1 304 -105 2220 117 0 0 chr5 72916865 72917164 -130168368 + AluSx SINE Alu 1 299 -13 398 327 89 27 chr5 72917221 72917478 -130168054 + L2 LINE L2 2456 2728 -586 242 311 81 47 chr5 72917578 72917726 -130167806 + L2 LINE L2 2929 3081 -191 2181 117 10 3 chr5 72918626 72918934 -130166598 - AluSg SINE Alu 0 310 1 326 173 0 0 chr5 72919118 72919170 -130166362 + FLAM SINE Alu 61 112 -21 703 185 0 0 chr5 72919244 72919363 -130166169 + AluJb SINE Alu 1 119 -193 29 28 0 0 chr5 72919368 72919404 -130166128 + AT_rich Low_complexity Low_complexity 1 36 0 705 238 100 0 chr5 72920429 72920639 -130164893 + L1ME3A LINE L1 5935 6165 -5 768 181 0 8 chr5 72920941 72921068 -130164464 - FLAM_A SINE Alu -7 126 1 258 220 0 0 chr5 72921942 72921992 -130163540 + L1MC4 LINE L1 7449 7498 -544 213 180 0 33 chr5 72921992 72922053 -130163479 + (TA)n Simple_repeat Simple_repeat 1 59 0 276 243 14 0 chr5 72922312 72922386 -130163146 + L1MC4 LINE L1 7968 8042 0 260 250 153 48 chr5 72924245 72924369 -130161163 - L2 LINE L2 0 3313 3177 1539 206 69 39 chr5 72924384 72924817 -130160715 + Charlie1a DNA MER1_type 1 446 -1009 * 2600 192 89 56 chr5 72924809 72925279 -130160253 + Charlie1a DNA MER1_type 623 1131 -1630 1434 116 14 0 chr5 72925279 72925495 -130160037 + L1PA14 LINE L1 5943 6161 0 2600 192 89 56 chr5 72925495 72925825 -130159707 + Charlie1a DNA MER1_type 1131 1449 -6 329 313 94 98 chr5 72925861 72926239 -130159293 - L2 LINE L2 -183 3089 2717 1745 148 0 40 chr5 72926239 72926537 -130158995 + AluJo SINE Alu 7 292 -20 329 313 94 98 chr5 72926537 72926702 -130158830 - L2 LINE L2 -555 2717 2553 920 185 28 0 chr5 72926882 72927060 -130158472 - MER5A DNA MER1_type -6 183 1 335 184 0 15 chr5 72927487 72927554 -130157978 - FLAM SINE Alu 0 133 73 1635 189 71 14 chr5 72928874 72929240 -130156292 - L1ME1 LINE L1 -177 6487 6101 1119 126 6 23 chr5 72929242 72929417 -130156115 - AluJb SINE Alu -4 308 137 2891 192 79 51 chr5 72929417 72930678 -130154854 - L1ME1 LINE L1 -576 6106 4801 1913 139 54 35 chr5 72930678 72931046 -130154486 + THE1C LTR MaLR 1 375 0 1754 108 90 4 chr5 72931046 72931324 -130154208 + THE1C-int LTR MaLR 1 302 -1278 1149 101 18 6 chr5 72931309 72931477 -130154055 - THE1-int LTR MaLR -1394 186 17 * 1481 210 38 38 chr5 72931474 72931865 -130153667 - L1ME1 LINE L1 -1840 4804 4414 237 216 59 0 chr5 72931886 72931937 -130153595 - L1ME1 LINE L1 -2328 4316 4263 1380 223 170 22 chr5 72931971 72932052 -130153480 - L1ME1 LINE L1 -2769 3875 3807 1650 158 8 11 chr5 72932052 72932318 -130153214 - AluJo SINE Alu -11 301 37 1380 223 170 22 chr5 72932318 72932475 -130153057 - L1ME1 LINE L1 -2837 3807 3675 2198 113 0 0 chr5 72932475 72932776 -130152756 - AluSx SINE Alu -11 301 1 1380 223 170 22 chr5 72932776 72933217 -130152315 - L1ME1 LINE L1 -2969 3675 3094 963 219 67 71 chr5 72933222 72933519 -130152013 - LTR41 LTR ERVL -472 301 6 326 335 39 7 chr5 72933621 72933776 -130151756 - L1ME1 LINE L1 -5667 875 716 342 0 0 0 chr5 72933869 72933907 -130151625 + (TG)n Simple_repeat Simple_repeat 2 39 0 317 322 0 0 chr5 72933907 72933997 -130151535 + L1MC4 LINE L1 6614 6703 -1339 315 315 0 0 chr5 72934029 72934118 -130151414 - L1MC4 LINE L1 -1339 6703 6615 357 267 0 0 chr5 72934119 72934224 -130151308 + (TA)n Simple_repeat Simple_repeat 1 105 0 907 109 0 31 chr5 72934224 72934352 -130151180 - AluSq/x SINE Alu -188 124 1 2339 102 0 0 chr5 72934365 72934668 -130150864 - AluSq SINE Alu -10 303 1 675 238 44 0 chr5 72934680 72934889 -130150643 - L1ME3 LINE L1 -91 6071 5837 387 265 20 0 chr5 72934880 72934982 -130150550 - L1ME3 LINE L1 -533 5629 5526 * 352 189 40 0 chr5 72935019 72935093 -130150439 - L1ME LINE L1 -503 5663 5587 251 91 0 23 chr5 72935200 72935244 -130150288 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 774 147 0 22 chr5 72935246 72935382 -130150150 - FLAM_C SINE Alu 0 133 1 278 278 62 28 chr5 72935687 72935831 -130149701 + LTR67 LTR ERVL 359 507 -50 1438 86 9 0 chr5 72936213 72936476 -130149056 - AluSp SINE Alu -19 294 62 2100 91 0 11 chr5 72936756 72937031 -130148501 - AluSq SINE Alu -21 292 21 326 138 5 23 chr5 72937031 72937099 -130148433 - Alu SINE Alu -256 47 1 618 292 55 4 chr5 72937209 72937516 -130148016 + L1MCa LINE L1 1399 1906 -4701 425 245 170 40 chr5 72937554 72937754 -130147778 - L1MEc LINE L1 -4837 1559 1334 2212 113 3 0 chr5 72937844 72938145 -130147387 - AluSc SINE Alu -7 302 1 638 224 34 137 chr5 72938964 72939517 -130146015 - L1ME1 LINE L1 -189 5911 3395 1092 214 18 67 chr5 72939529 72939780 -130145752 - L1M4 LINE L1 -1823 4323 4092 2263 106 0 0 chr5 72939780 72940081 -130145451 - AluSx SINE Alu -11 301 1 1092 214 18 67 chr5 72940081 72940171 -130145361 - L1M4 LINE L1 -2054 4092 3999 461 224 8 16 chr5 72940188 72940313 -130145219 - L1MC5 LINE L1 -48 7913 7790 1644 235 36 46 chr5 72940363 72940701 -130144831 - L1ME1 LINE L1 -20 6146 5813 2223 116 3 0 chr5 72940701 72941004 -130144528 + AluSx SINE Alu 1 304 -8 1644 235 36 46 chr5 72941004 72941168 -130144364 - L1ME1 LINE L1 -353 5813 5649 1696 175 16 16 chr5 72941175 72941478 -130144054 - AluJo SINE Alu -9 303 1 492 214 0 0 chr5 72941478 72941576 -130143956 - L1M4 LINE L1 -2291 3855 3758 301 257 87 44 chr5 72941573 72941779 -130143753 - L1ME1 LINE L1 -5403 680 466 * 492 296 78 29 chr5 72941872 72942115 -130143417 - L1ME1 LINE L1 -5589 481 227 241 219 37 24 chr5 72942492 72942574 -130142958 - L1ME1 LINE L1 -5877 193 111 192 152 0 0 chr5 72942601 72942634 -130142898 + T-rich Low_complexity Low_complexity 1 33 0 229 253 40 0 chr5 72942771 72942846 -130142686 - L1ME1 LINE L1 -5971 99 22 1715 105 67 46 chr5 72942865 72943150 -130142382 - AluSx SINE Alu -21 291 1 309 378 93 10 chr5 72943156 72943349 -130142183 - L1MEd LINE L1 -5661 869 661 554 304 108 14 chr5 72943498 72943923 -130141609 - L1MEd LINE L1 -4512 2028 1564 346 243 26 127 chr5 72943945 72944047 -130141485 - L1MEd LINE L1 -5943 587 511 2132 113 0 10 chr5 72944047 72944347 -130141185 - AluSg1 SINE Alu -12 297 1 346 243 26 127 chr5 72944347 72944433 -130141099 - L1MEd LINE L1 -6019 511 418 431 305 146 43 chr5 72944486 72944952 -130140580 + L2 LINE L2 1899 2412 -902 2313 96 0 13 chr5 72945726 72946038 -130139494 + AluSx SINE Alu 3 310 -2 2032 179 62 31 chr5 72946180 72946431 -130139101 - MLT1C LTR MaLR 0 467 194 270 56 0 0 chr5 72946431 72946467 -130139065 + (TG)n Simple_repeat Simple_repeat 1 36 0 2032 179 62 31 chr5 72946467 72946668 -130138864 - MLT1C LTR MaLR -273 194 1 363 336 52 0 chr5 72946876 72946992 -130138540 + L2 LINE L2 3182 3303 -10 198 0 0 0 chr5 72947019 72947041 -130138491 + (A)n Simple_repeat Simple_repeat 1 22 0 857 216 28 0 chr5 72947185 72947361 -130138171 - MER3 DNA MER1_type -27 182 2 397 282 51 60 chr5 72948482 72948698 -130136834 - L1ME4a LINE L1 -214 5907 5694 39 74 0 0 chr5 72949066 72949147 -130136385 + AT_rich Low_complexity Low_complexity 1 81 0 2202 86 0 51 chr5 72949845 72950160 -130135372 - AluSc SINE Alu -10 299 1 313 261 43 58 chr5 72950260 72950398 -130135134 + L2 LINE L2 2723 2858 -456 2159 122 3 0 chr5 72950445 72950741 -130134791 + AluSx SINE Alu 1 297 -15 204 342 0 0 chr5 72950990 72951066 -130134466 + L2 LINE L2 2219 2294 -1020 195 304 134 73 chr5 72951095 72951408 -130134124 + L2 LINE L2 2392 2723 -591 1511 199 108 9 chr5 72951744 72952087 -130133445 - MLT1E1 LTR MaLR -1 625 268 2297 109 0 0 chr5 72952200 72952503 -130133029 + AluSg SINE Alu 1 303 -7 536 222 44 52 chr5 72952570 72952705 -130132827 - MIR SINE MIR -90 172 39 513 340 35 10 chr5 72953026 72953223 -130132309 + L3 LINE CR1 639 840 -737 5184 175 66 34 chr5 72953231 72954051 -130131481 - L1MB2 LINE L1 0 6887 6095 1480 153 61 58 chr5 72954051 72954346 -130131186 - AluJo SINE Alu -16 296 1 5184 175 66 34 chr5 72954346 72954511 -130131021 - L1MB2 LINE L1 -792 6095 5937 666 173 7 65 chr5 72954511 72954650 -130130882 - FLAM_C SINE Alu -2 131 1 5184 175 66 34 chr5 72954650 72955913 -130129619 - L1MB2 LINE L1 -950 5937 4570 37046 74 12 8 chr5 72955926 72962046 -130123486 - L1PA6 LINE L1 -2 6152 11 2205 100 10 17 chr5 72962056 72962355 -130123177 - AluSq SINE Alu -16 297 1 2585 224 69 1 chr5 72962358 72963127 -130122405 - L1MB2 LINE L1 -2298 4564 3744 5450 206 27 11 chr5 72963143 72963605 -130121927 - L1 LINE L1 -2441 4421 3967 2383 85 3 10 chr5 72963605 72963911 -130121621 - AluY SINE Alu -7 304 1 5450 206 27 11 chr5 72963911 72964838 -130120694 - L1 LINE L1 -2895 3967 3011 6543 168 28 51 chr5 72964865 72965742 -130119790 - L1MB2 LINE L1 -4100 2763 1792 2055 110 38 3 chr5 72965742 72966032 -130119500 - AluSc SINE Alu -9 300 1 6543 168 28 51 chr5 72966032 72966716 -130118816 - L1MB2 LINE L1 -5071 1792 1094 2708 244 63 18 chr5 72966721 72967716 -130117816 - L1MB2 LINE L1 -5818 1045 6 274 222 28 0 chr5 72967731 72967803 -130117729 - L1M4c LINE L1 -3633 2749 2676 31 44 0 0 chr5 72967809 72967854 -130117678 + AT_rich Low_complexity Low_complexity 1 45 0 1895 240 64 32 chr5 72967888 72969134 -130116398 - L1M4c LINE L1 -3873 2690 1276 1376 234 16 7 chr5 72969137 72969445 -130116087 - HERVL40 LTR ERVL -1158 4606 4296 1828 196 54 50 chr5 72969450 72969951 -130115581 - MLT1D LTR MaLR -2 503 1 351 298 65 99 chr5 72969952 72970355 -130115177 - L1MEc LINE L1 -2376 3839 3451 2237 136 0 0 chr5 72970734 72971042 -130114490 - AluSx SINE Alu -4 308 1 23 33 0 0 chr5 72971042 72971072 -130114460 + AT_rich Low_complexity Low_complexity 1 30 0 403 377 20 10 chr5 72971133 72971332 -130114200 - MIR SINE MIR -60 202 2 28 48 0 0 chr5 72971744 72971786 -130113746 + AT_rich Low_complexity Low_complexity 1 42 0 874 165 0 0 chr5 72971874 72972007 -130113525 - FLAM_C SINE Alu 0 133 1 2272 106 0 13 chr5 72972255 72972556 -130112976 + AluSq SINE Alu 1 297 -16 544 318 7 0 chr5 72972862 72973010 -130112522 + L2 LINE L2 2922 3070 -243 2241 100 7 7 chr5 72973017 72973316 -130112216 + AluSx SINE Alu 1 299 -13 443 273 86 30 chr5 72973346 72973544 -130111988 - L1MEc LINE L1 -3728 2487 2279 1633 185 7 3 chr5 72973676 72973968 -130111564 + AluJb SINE Alu 1 293 -19 454 316 37 5 chr5 72974207 72974397 -130111135 - HERVL40 LTR ERVL -59 2978 2783 * 470 335 57 16 chr5 72974277 72974647 -130110885 - MER89-int LTR ERV1 -299 6502 6118 486 185 185 49 chr5 72975062 72975224 -130110308 - HERVL40 LTR ERVL -2661 2869 2686 1486 248 28 45 chr5 72975261 72975769 -130109763 - HERVL40 LTR ERVL -2908 2622 2124 264 239 23 23 chr5 72975922 72976010 -130109522 - HERVL40 LTR ERVL -5424 106 19 1856 262 23 17 chr5 72976026 72976542 -130108990 - LTR40a LTR ERVL 0 519 1 1164 236 147 30 chr5 72976550 72977088 -130108444 + L1M4 LINE L1 3714 4314 -1832 1605 139 171 7 chr5 72977090 72977399 -130108133 + MER47A DNA MER2_type 7 366 0 2077 232 62 6 chr5 72977400 72978043 -130107489 + L1M4 LINE L1 4310 4988 -1158 1740 148 95 0 chr5 72978097 72978381 -130107151 - AluSx SINE Alu -1 311 1 2493 215 55 20 chr5 72978402 72979168 -130106364 - L1MEc LINE L1 -4092 2304 1512 4362 261 47 28 chr5 72979185 72980931 -130104601 - L1MEc LINE L1 -4545 1851 73 566 268 119 6 chr5 72981018 72981186 -130104346 + MER5A DNA MER1_type 3 189 0 487 197 126 24 chr5 73031507 73031634 -130053898 - MER6B DNA MER2_type -70 140 1 295 281 141 8 chr5 73032036 73032157 -130053375 - MIR SINE MIR -77 185 49 1853 176 39 0 chr5 73032369 73032699 -130052833 - MER2 DNA MER2_type -1 343 1 3377 122 80 42 chr5 73033535 73034176 -130051356 - L1MA8 LINE L1 -108 6183 5519 25 0 0 0 chr5 73034258 73034283 -130051249 + AT_rich Low_complexity Low_complexity 1 25 0 453 81 0 0 chr5 73034462 73034524 -130051008 + (TCCTG)n Simple_repeat Simple_repeat 2 63 0 1996 102 50 3 chr5 73034524 73034802 -130050730 - AluSc SINE Alu -18 291 1 2090 92 9 41 chr5 73034948 73035263 -130050269 - AluSx SINE Alu -7 305 1 1591 204 0 26 chr5 73035484 73035792 -130049740 - AluJb SINE Alu -12 300 1 211 186 47 0 chr5 73036257 73036300 -130049232 - L2 LINE L2 -4 3268 3224 1573 188 7 7 chr5 73036473 73036755 -130048777 + AluJo SINE Alu 1 282 -30 574 239 0 43 chr5 73036791 73036929 -130048603 - FLAM_A SINE Alu -1 132 1 280 394 21 16 chr5 73036956 73037149 -130048383 - L2 LINE L2 -339 2975 2782 342 241 58 115 chr5 73037164 73037290 -130048242 + MER117 DNA MER1_type 1 116 -81 458 258 15 15 chr5 73037290 73037422 -130048110 + MER94 DNA DNA 3 134 0 342 241 58 115 chr5 73037422 73037469 -130048063 + MER117 DNA MER1_type 116 164 -33 641 320 52 47 chr5 73037490 73037934 -130047598 - L2 LINE L2 -559 2755 2310 302 320 161 48 chr5 73038285 73038719 -130046813 - L2 LINE L2 -1176 2138 1656 2233 97 0 23 chr5 73038750 73039058 -130046474 + AluSx SINE Alu 1 301 -11 1987 121 11 0 chr5 73039221 73039501 -130046031 - AluSx SINE Alu -19 293 11 556 335 143 17 chr5 73039967 73040486 -130045046 + L2 LINE L2 2028 2611 -703 690 198 176 13 chr5 73040487 73040725 -130044807 + MER33 DNA MER1_type 1 277 -47 1633 183 23 23 chr5 73040738 73041039 -130044493 + AluJo SINE Alu 3 303 -9 207 314 70 96 chr5 73041102 73041258 -130044274 + L2 LINE L2 2610 2761 -553 337 313 52 113 chr5 73041341 73041686 -130043846 + L2 LINE L2 2947 3270 -2 614 154 41 8 chr5 73041865 73041988 -130043544 - L1MB7 LINE L1 -11 6173 6047 186 43 0 0 chr5 73043951 73043974 -130041558 + (TG)n Simple_repeat Simple_repeat 2 24 0 257 234 31 0 chr5 73044141 73044205 -130041327 + MIR SINE MIR 88 153 -109 245 174 22 0 chr5 73044236 73044282 -130041250 + Tigger4(Zombi) DNA MER2_type 2684 2730 -1 281 250 48 36 chr5 73045023 73045107 -130040425 - MIR SINE MIR -32 230 146 301 164 131 0 chr5 73045110 73045171 -130040361 + MER58 DNA MER1_type 2350 2418 -2 767 189 75 44 chr5 73046723 73046951 -130038581 - MER46A DNA MER2_type 0 236 2 352 216 14 14 chr5 73048754 73048828 -130036704 + Tigger3(Golem) DNA MER2_type 1 74 -2955 2175 102 0 3 chr5 73048830 73049125 -130036407 + AluSx SINE Alu 1 294 -18 589 208 23 0 chr5 73049143 73049273 -130036259 + AluJb SINE Alu 1 133 -179 1694 173 0 13 chr5 73049281 73049581 -130035951 + AluJo SINE Alu 1 296 -16 316 136 0 0 chr5 73049583 73049627 -130035905 + Tigger3(Golem) DNA MER2_type 70 113 -2916 1056 129 9 227 chr5 73049631 73049957 -130035575 + Tigger3(Golem) DNA MER2_type 2784 3038 0 2389 194 13 13 chr5 73051291 73051816 -130033716 - L1MB7 LINE L1 0 6184 5660 276 146 0 0 chr5 73051848 73051889 -130033643 + L1M4 LINE L1 5525 5565 -613 231 264 0 0 chr5 73051921 73051974 -130033558 + MER3 DNA MER1_type 38 90 -119 * 241 245 0 0 chr5 73051931 73051980 -130033552 - Charlie5 DNA MER1_type -2403 209 161 246 350 43 21 chr5 73052538 73052678 -130032854 - L2 LINE L2 -444 2870 2728 28 48 0 0 chr5 73052948 73052990 -130032542 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5 73053169 73053201 -130032331 + AT_rich Low_complexity Low_complexity 1 32 0 307 301 168 25 chr5 73053339 73053535 -130031997 + MIR SINE MIR 19 242 -20 1908 150 0 10 chr5 73055187 73055487 -130030045 + AluJb SINE Alu 1 297 -15 1553 190 35 3 chr5 73055503 73055793 -130029739 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr5 73056073 73056094 -130029438 + AT_rich Low_complexity Low_complexity 1 21 0 272 335 106 39 chr5 73059615 73060003 -130025529 - L2 LINE L2 -561 2753 2340 28 71 0 0 chr5 73060656 73060712 -130024820 + AT_rich Low_complexity Low_complexity 1 56 0 630 286 54 20 chr5 73060742 73060945 -130024587 + MIR SINE MIR 53 262 0 31 58 0 0 chr5 73061053 73061105 -130024427 + AT_rich Low_complexity Low_complexity 1 52 0 43764 40 5 2 chr5 73061132 73067264 -130018268 - L1PA4 LINE L1 -3 6152 3 390 249 58 67 chr5 73067916 73068115 -130017417 - MIR SINE MIR -1 261 66 876 133 0 16 chr5 73068449 73068577 -130016955 - FLAM_C SINE Alu -17 126 1 621 0 0 0 chr5 73069168 73069237 -130016295 + (TG)n Simple_repeat Simple_repeat 2 70 0 286 304 22 0 chr5 73069269 73069361 -130016171 - MIR SINE MIR -110 152 59 186 71 0 0 chr5 73070093 73070121 -130015411 + (A)n Simple_repeat Simple_repeat 1 28 0 848 164 0 0 chr5 73071356 73071490 -130014042 + AluJo SINE Alu 87 220 -92 284 102 61 20 chr5 73071490 73071539 -130013993 + AluJo SINE Alu 86 136 -166 1162 210 112 4 chr5 73071622 73071745 -130013787 + AluJo SINE Alu 1 109 -193 219 69 0 0 chr5 73071745 73071774 -130013758 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1162 210 112 4 chr5 73071774 73071917 -130013615 + AluJo SINE Alu 109 296 -6 2255 85 7 0 chr5 73073596 73073917 -130011615 - AluSq SINE Alu 0 323 1 22 0 0 0 chr5 73074620 73074642 -130010890 + AT_rich Low_complexity Low_complexity 1 22 0 1561 169 3 54 chr5 73074646 73074941 -130010591 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr5 73074944 73074967 -130010565 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr5 73075293 73075317 -130010215 + AT_rich Low_complexity Low_complexity 1 24 0 1794 161 0 35 chr5 73077454 73077764 -130007768 - AluJo SINE Alu -13 299 1 22 56 0 0 chr5 73080524 73080560 -130004972 + AT_rich Low_complexity Low_complexity 1 36 0 1052 40 0 0 chr5 73080617 73080742 -130004790 + AluY SINE Alu 175 299 -12 322 290 0 14 chr5 73081085 73081154 -130004378 + MIR SINE MIR 12 79 -183 266 287 35 0 chr5 73081177 73081292 -130004240 - L1MC4 LINE L1 -2 8040 7922 447 87 0 0 chr5 73081332 73081401 -130004131 + (CA)n Simple_repeat Simple_repeat 2 70 0 492 299 43 12 chr5 73081442 73081606 -130003926 + MIR SINE MIR 84 252 -10 479 288 28 34 chr5 73081756 73081933 -130003599 - MER5B DNA MER1_type -1 177 2 24 32 0 0 chr5 73083001 73083032 -130002500 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 73084563 73084592 -130000940 + AT_rich Low_complexity Low_complexity 1 29 0 2619 49 0 0 chr5 73086622 73086928 -129998604 - AluY SINE Alu -5 306 1 1813 179 7 0 chr5 73087706 73088008 -129997524 + AluJb SINE Alu 1 304 -8 249 289 148 0 chr5 73088139 73088274 -129997258 + HAL1 LINE L1 1611 1765 -742 746 192 17 0 chr5 73088398 73088518 -129997014 - FLAM_C SINE Alu -19 124 3 2292 117 0 0 chr5 73088531 73088839 -129996693 - AluSp SINE Alu -5 308 1 602 344 69 30 chr5 73089004 73089441 -129996091 - L1ME LINE L1 -392 5770 5315 2122 136 0 16 chr5 73089499 73089816 -129995716 - AluSx SINE Alu 0 312 1 304 279 88 81 chr5 73089859 73090142 -129995390 - L1ME LINE L1 -913 5233 4949 573 268 119 6 chr5 73090436 73090604 -129994928 - MER5A DNA MER1_type 0 189 3 4830 260 48 29 chr5 73090691 73092437 -129993095 + L1MEc LINE L1 73 1851 -4545 2684 215 55 20 chr5 73092454 73093220 -129992312 + L1MEc LINE L1 1512 2304 -4092 1707 133 98 3 chr5 73093241 73093526 -129992006 + AluSx SINE Alu 1 312 0 2256 230 62 6 chr5 73093581 73094224 -129991308 - L1ME LINE L1 -1158 4988 4310 1713 139 171 7 chr5 73094225 73094534 -129990998 - MER47A DNA MER2_type 0 366 7 1307 236 147 30 chr5 73094536 73095074 -129990458 - L1ME LINE L1 -1832 4314 3714 2118 249 21 14 chr5 73095082 73095597 -129989935 + LTR40a LTR ERVL 1 519 0 294 255 59 20 chr5 73095599 73095701 -129989831 + HERVL40 LTR ERVL 1 106 -5424 1641 248 28 45 chr5 73095854 73096362 -129989170 + HERVL40 LTR ERVL 2124 2622 -2908 540 185 185 49 chr5 73096399 73096561 -129988971 + HERVL40 LTR ERVL 2686 2869 -2661 256 298 39 66 chr5 73096635 73096816 -129988716 + HERVL68 LTR ERVL 2461 2636 -401 645 338 51 11 chr5 73096976 73097346 -129988186 + MER89-int LTR ERV1 6118 6502 -299 506 316 37 5 chr5 73097226 73097416 -129988116 + HERVL68 LTR ERVL 2783 2978 -59 * 1615 185 7 3 chr5 73097655 73097947 -129987585 - AluJb SINE Alu -19 293 1 247 273 88 31 chr5 73098079 73098273 -129987259 + L1MEc LINE L1 2279 2483 -3732 2232 97 7 7 chr5 73098307 73098606 -129986926 - AluSx SINE Alu -13 299 1 540 318 7 0 chr5 73098613 73098761 -129986771 - L2 LINE L2 -243 3070 2922 2256 106 0 13 chr5 73099066 73099367 -129986165 - AluSq SINE Alu -16 297 1 867 165 0 0 chr5 73099615 73099748 -129985784 + FLAM_C SINE Alu 1 133 0 28 48 0 0 chr5 73099836 73099878 -129985654 + AT_rich Low_complexity Low_complexity 1 42 0 418 377 20 10 chr5 73100289 73100488 -129985044 + MIR SINE MIR 2 202 -60 23 33 0 0 chr5 73100549 73100579 -129984953 + AT_rich Low_complexity Low_complexity 1 30 0 2236 129 0 0 chr5 73100579 73100888 -129984644 + AluSx SINE Alu 1 309 -3 368 300 65 99 chr5 73101267 73101670 -129983862 + L1MEc LINE L1 3451 3839 -2376 1849 196 54 50 chr5 73101671 73102172 -129983360 + MLT1D LTR MaLR 1 503 -2 1477 231 16 7 chr5 73102177 73102485 -129983047 + HERVL68 LTR ERVL 4296 4606 -1158 2037 234 39 33 chr5 73102488 73103734 -129981798 + L1M4c LINE L1 1276 2690 -3873 31 44 0 0 chr5 73103768 73103813 -129981719 + AT_rich Low_complexity Low_complexity 1 45 0 295 222 28 0 chr5 73103819 73103891 -129981641 + L1M4c LINE L1 2676 2749 -3633 7716 138 30 23 chr5 73103906 73105544 -129979988 + L1MB2 LINE L1 6 1893 -4970 2041 110 38 3 chr5 73105544 73105835 -129979697 + AluSc SINE Alu 1 301 -8 7716 138 30 23 chr5 73105835 73106712 -129978820 + L1MB2 LINE L1 1893 2763 -4100 4951 197 24 8 chr5 73106739 73107666 -129977866 + L1 LINE L1 3011 3968 -2894 2397 82 3 10 chr5 73107666 73107972 -129977560 + AluY SINE Alu 1 304 -7 4951 197 24 8 chr5 73107972 73108434 -129977098 + L1 LINE L1 3968 4421 -2441 2585 224 69 1 chr5 73108450 73109219 -129976313 + L1MB2 LINE L1 3744 4564 -2298 2205 100 10 17 chr5 73109222 73109521 -129976011 + AluSq SINE Alu 1 297 -16 36995 74 12 8 chr5 73109531 73115650 -129969882 + L1PA6 LINE L1 11 6152 -2 5209 180 59 35 chr5 73115663 73116926 -129968606 + L1MB2 LINE L1 4570 5802 -1085 666 173 7 65 chr5 73116926 73117065 -129968467 + FLAM_C SINE Alu 1 131 -2 5209 180 59 35 chr5 73117065 73117230 -129968302 + L1MB2 LINE L1 5802 5962 -925 1480 153 61 58 chr5 73117230 73117525 -129968007 + AluJo SINE Alu 1 296 -16 5209 180 59 35 chr5 73117525 73118345 -129967187 + L1MB2 LINE L1 5962 6887 0 505 340 35 10 chr5 73118353 73118550 -129966982 - L3 LINE CR1 -737 840 639 538 222 44 52 chr5 73118871 73119006 -129966526 + MIR SINE MIR 39 172 -90 2309 112 0 0 chr5 73119073 73119376 -129966156 - AluSg SINE Alu -7 303 1 1396 199 108 9 chr5 73119489 73119832 -129965700 + MLT1E1 LTR MaLR 268 504 -1 199 304 134 73 chr5 73120168 73120481 -129965051 - L2 LINE L2 -591 2723 2392 209 342 0 0 chr5 73120510 73120586 -129964946 - L2 LINE L2 -1020 2294 2219 2125 122 7 0 chr5 73120835 73121130 -129964402 - AluSx SINE Alu -15 297 1 318 261 43 58 chr5 73121177 73121315 -129964217 - L2 LINE L2 -456 2858 2723 2215 86 0 51 chr5 73121415 73121730 -129963802 + AluSc SINE Alu 1 299 -10 39 74 0 0 chr5 73122428 73122509 -129963023 + AT_rich Low_complexity Low_complexity 1 81 0 397 282 51 60 chr5 73122877 73123093 -129962439 + L1ME4a LINE L1 5694 5907 -214 803 216 28 0 chr5 73124214 73124390 -129961142 + MER3 DNA MER1_type 2 182 -27 207 0 0 0 chr5 73124534 73124557 -129960975 + (T)n Simple_repeat Simple_repeat 1 23 0 362 336 52 0 chr5 73124584 73124700 -129960832 - L2 LINE L2 -10 3303 3182 2025 179 62 31 chr5 73124908 73125109 -129960423 + MLT1C LTR MaLR 1 194 -273 270 56 0 0 chr5 73125109 73125145 -129960387 + (CA)n Simple_repeat Simple_repeat 1 36 0 2025 179 62 31 chr5 73125145 73125396 -129960136 + MLT1C LTR MaLR 194 467 0 2330 96 0 13 chr5 73125538 73125850 -129959682 - AluSx SINE Alu -2 310 3 435 305 146 43 chr5 73126624 73127090 -129958442 - L2 LINE L2 -902 2412 1899 346 243 26 127 chr5 73127143 73127229 -129958303 + L1MEd LINE L1 418 476 -6054 2152 113 0 10 chr5 73127229 73127529 -129958003 + AluSg1 SINE Alu 1 297 -12 346 243 26 127 chr5 73127529 73127631 -129957901 + L1MEd LINE L1 476 587 -5943 456 306 108 14 chr5 73127653 73128078 -129957454 + L1MEd LINE L1 1564 2028 -4512 309 378 93 10 chr5 73128227 73128420 -129957112 + L1MEd LINE L1 661 869 -5661 1732 105 67 46 chr5 73128426 73128711 -129956821 + AluSx SINE Alu 1 291 -21 308 241 32 76 chr5 73128926 73129084 -129956448 + L1ME LINE L1 43 193 -5877 423 296 78 29 chr5 73129461 73129704 -129955828 + L1ME LINE L1 227 481 -5589 265 250 60 30 chr5 73129797 73130003 -129955529 + L1ME LINE L1 466 680 -5403 * 467 214 0 0 chr5 73130000 73130098 -129955434 + L1M4 LINE L1 3758 3855 -2291 1730 175 16 16 chr5 73130098 73130401 -129955131 + AluJo SINE Alu 1 303 -9 1502 235 36 46 chr5 73130408 73130572 -129954960 + L1ME1 LINE L1 5649 5813 -353 2248 116 3 0 chr5 73130572 73130875 -129954657 - AluSx SINE Alu -8 304 1 1502 235 36 46 chr5 73130875 73131213 -129954319 + L1ME1 LINE L1 5813 6146 -20 418 232 8 16 chr5 73131263 73131388 -129954144 + L1MC5 LINE L1 7790 7913 -48 1009 214 18 67 chr5 73131405 73131495 -129954037 + L1M4 LINE L1 3999 4092 -2054 2278 106 0 0 chr5 73131495 73131796 -129953736 + AluSx SINE Alu 1 301 -11 1009 214 18 67 chr5 73131796 73132047 -129953485 + L1M4 LINE L1 4092 4323 -1823 545 193 36 14 chr5 73132059 73132199 -129953333 + L1 LINE L1 3461 3603 -2543 551 224 7 7 chr5 73132216 73132359 -129953173 + L1 LINE L1 3685 3827 -2319 * 598 235 0 0 chr5 73132350 73132486 -129953046 + L1ME1 LINE L1 5842 5977 -189 511 227 0 16 chr5 73132484 73132612 -129952920 + L1 LINE L1 3831 3956 -2190 * 2239 113 3 0 chr5 73133431 73133732 -129951800 + AluSc SINE Alu 1 302 -7 424 245 170 40 chr5 73133822 73134022 -129951510 + L1MEc LINE L1 1334 1559 -4837 550 292 55 4 chr5 73134060 73134367 -129951165 - L1MCa LINE L1 -4701 1906 1399 308 138 5 23 chr5 73134477 73134545 -129950987 + Alu SINE Alu 1 47 -254 2110 91 0 11 chr5 73134545 73134820 -129950712 + AluSq SINE Alu 21 292 -21 432 116 14 0 chr5 73135100 73135169 -129950363 + AluSp SINE Alu 62 131 -182 1451 74 6 0 chr5 73135187 73135363 -129950169 + AluSp SINE Alu 118 294 -19 244 228 51 13 chr5 73135745 73135824 -129949708 - LTR67 LTR ERVL -50 507 426 782 147 0 22 chr5 73136194 73136376 -129949156 + FLAM_C SINE Alu 1 179 0 331 189 40 0 chr5 73136483 73136557 -129948975 + L1ME LINE L1 5587 5663 -503 357 274 20 0 chr5 73136594 73136696 -129948836 + L1ME3 LINE L1 5526 5629 -535 * 628 238 44 0 chr5 73136687 73136896 -129948636 + L1ME3 LINE L1 5837 6071 -91 2363 102 0 0 chr5 73136908 73137211 -129948321 + AluSq SINE Alu 1 303 -10 919 109 0 31 chr5 73137224 73137352 -129948180 + AluSq/x SINE Alu 1 124 -188 357 267 0 0 chr5 73137352 73137457 -129948075 + (TA)n Simple_repeat Simple_repeat 2 106 0 315 315 0 0 chr5 73137458 73137547 -129947985 + L1MC4 LINE L1 6615 6703 -1339 237 211 0 0 chr5 73137548 73137600 -129947932 + (TATG)n Simple_repeat Simple_repeat 3 54 0 * 570 182 0 0 chr5 73137599 73137709 -129947823 + (CA)n Simple_repeat Simple_repeat 2 111 0 282 335 39 7 chr5 73137801 73137956 -129947576 + L1ME1 LINE L1 716 875 -5667 869 222 67 71 chr5 73138058 73138355 -129947177 + LTR41 LTR ERVL 6 301 -472 1215 226 170 22 chr5 73138360 73138801 -129946731 + L1ME1 LINE L1 3094 3468 -3176 2215 113 0 0 chr5 73138801 73139102 -129946430 + AluSx SINE Alu 1 301 -11 1215 226 170 22 chr5 73139102 73139259 -129946273 + L1ME1 LINE L1 3468 3600 -3044 1654 162 8 11 chr5 73139259 73139525 -129946007 + AluJo SINE Alu 37 301 -11 1215 226 170 22 chr5 73139525 73139606 -129945926 + L1ME1 LINE L1 3600 3875 -2769 1377 210 38 38 chr5 73139712 73140103 -129945429 + L1ME1 LINE L1 4414 4804 -1840 1021 96 30 6 chr5 73140100 73140266 -129945266 + THE1-int LTR MaLR 17 186 -1394 * 1599 105 98 4 chr5 73140251 73140527 -129945005 - THE1C-int LTR MaLR -1278 302 1 1903 133 57 38 chr5 73140527 73140895 -129944637 - THE1C LTR MaLR 0 375 1 2618 193 79 53 chr5 73140895 73142158 -129943374 + L1ME1 LINE L1 4801 6106 -576 1124 126 6 23 chr5 73142158 73142333 -129943199 + AluJb SINE Alu 137 308 -4 1523 189 71 14 chr5 73142335 73142701 -129942831 + L1ME1 LINE L1 6101 6487 -177 316 197 0 0 chr5 73144021 73144082 -129941450 + FLAM SINE Alu 73 133 0 930 185 28 0 chr5 73144515 73144693 -129940839 + MER5A DNA MER1_type 1 183 -6 431 325 97 61 chr5 73144873 73145018 -129940514 + L2 LINE L2 2553 2691 -581 1746 176 0 37 chr5 73145018 73145342 -129940190 - AluJo SINE Alu 0 312 1 431 325 97 61 chr5 73145342 73145714 -129939818 + L2 LINE L2 2691 3089 -183 2016 183 111 60 chr5 73145750 73146077 -129939455 - Charlie1a DNA MER1_type -1312 1449 1140 1132 132 38 9 chr5 73146077 73146290 -129939242 - L1PA14 LINE L1 0 6161 5943 2016 183 111 60 chr5 73146290 73146749 -129938783 - Charlie1a DNA MER1_type -1621 1140 623 1412 213 67 37 chr5 73146741 73147174 -129938358 - Charlie1a DNA MER1_type -1009 446 1 * 265 250 153 48 chr5 73147189 73147313 -129938219 + L2 LINE L2 3177 3313 0 252 243 14 0 chr5 73149195 73149269 -129936263 - L1MC4 LINE L1 0 8042 7968 213 180 0 33 chr5 73149528 73149589 -129935943 + (TA)n Simple_repeat Simple_repeat 2 60 0 241 220 0 0 chr5 73149589 73149639 -129935893 - L1MC4 LINE L1 -544 7498 7449 776 181 0 8 chr5 73150513 73150640 -129934892 + FLAM_A SINE Alu 1 126 -7 639 238 100 0 chr5 73150942 73151152 -129934380 - L1ME3A LINE L1 -5 6165 5935 29 28 0 0 chr5 73152177 73152213 -129933319 + AT_rich Low_complexity Low_complexity 1 36 0 714 185 0 0 chr5 73152218 73152337 -129933195 - AluJb SINE Alu -193 119 1 307 173 0 0 chr5 73152411 73152463 -129933069 - FLAM SINE Alu -21 112 61 2227 114 10 3 chr5 73152647 73152955 -129932577 + AluSg SINE Alu 1 310 0 244 311 81 47 chr5 73153855 73154003 -129931529 - L2 LINE L2 -191 3081 2929 395 327 89 27 chr5 73154103 73154360 -129931172 - L2 LINE L2 -586 2728 2456 2235 117 0 0 chr5 73154417 73154716 -129930816 - AluSx SINE Alu -13 299 1 756 276 80 22 chr5 73154740 73155015 -129930517 - MLT1I LTR MaLR -105 304 14 260 326 128 20 chr5 73155032 73155228 -129930304 - L2 LINE L2 -854 2460 2244 2602 41 0 22 chr5 73155410 73155726 -129929806 - AluY SINE Alu -1 310 2 255 103 0 0 chr5 73159897 73159936 -129925596 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 21 36 0 0 chr5 73161748 73161776 -129923756 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 73162760 73162782 -129922750 + AT_rich Low_complexity Low_complexity 1 22 0 2175 79 14 0 chr5 73163494 73163784 -129921748 + AluY SINE Alu 1 294 -17 800 254 33 21 chr5 73164107 73164347 -129921185 - L2 LINE L2 -399 2915 2673 229 143 122 0 chr5 73164750 73164799 -129920733 + MIR SINE MIR 145 199 -63 2729 218 59 18 chr5 73164883 73165508 -129920024 - MER82 DNA MER2_type 0 653 3 463 288 16 16 chr5 73167607 73167732 -129917800 - MIR3 SINE MIR -10 198 74 27 62 0 0 chr5 73168560 73168608 -129916924 + AT_rich Low_complexity Low_complexity 1 48 0 1640 157 8 0 chr5 73170141 73170396 -129915136 - AluJb SINE Alu -38 274 18 23 0 0 0 chr5 73171722 73171745 -129913787 + AT_rich Low_complexity Low_complexity 1 23 0 1816 140 3 47 chr5 73172002 73172323 -129913209 - AluSx SINE Alu -5 307 1 798 276 24 20 chr5 73172499 73172745 -129912787 - MIR SINE MIR -10 252 6 1052 178 29 62 chr5 73172922 73173163 -129912369 + MER46A DNA MER2_type 1 233 -3 213 237 0 0 chr5 73174259 73174318 -129911214 + GA-rich Low_complexity Low_complexity 5 63 0 183 283 0 0 chr5 73174381 73174480 -129911052 + GA-rich Low_complexity Low_complexity 1 99 0 480 240 27 34 chr5 73175431 73175577 -129909955 - MIR SINE MIR -1 261 117 1989 139 3 0 chr5 73176051 73176338 -129909194 - AluSx SINE Alu -24 288 1 2187 109 3 19 chr5 73176467 73176778 -129908754 - AluSx SINE Alu -6 306 1 23 68 0 0 chr5 73176903 73176947 -129908585 + AT_rich Low_complexity Low_complexity 1 44 0 430 330 70 15 chr5 73176991 73177191 -129908341 - MIR SINE MIR -3 259 49 22 88 0 0 chr5 73178723 73178780 -129906752 + AT_rich Low_complexity Low_complexity 1 57 0 875 296 77 29 chr5 73178948 73179967 -129905565 - L1MC4a LINE L1 -774 5372 4754 276 163 0 0 chr5 73180226 73180269 -129905263 - 5S rRNA rRNA -78 43 1 442 271 141 27 chr5 73180272 73180534 -129904998 - L1MC4a LINE L1 -1623 4523 4232 385 197 191 28 chr5 73180683 73180861 -129904671 - L1MC4a LINE L1 -1684 6124 5918 28 48 0 0 chr5 73181433 73181475 -129904057 + AT_rich Low_complexity Low_complexity 1 42 0 270 150 150 0 chr5 73181886 73181946 -129903586 - MIR SINE MIR -10 252 184 236 268 0 0 chr5 73185016 73185072 -129900460 + (TG)n Simple_repeat Simple_repeat 1 56 0 24 32 0 0 chr5 73186179 73186210 -129899322 + AT_rich Low_complexity Low_complexity 1 31 0 1691 197 0 10 chr5 73186306 73186600 -129898932 - AluJo SINE Alu -20 292 2 21 71 0 0 chr5 73186802 73186844 -129898688 + AT_rich Low_complexity Low_complexity 1 42 0 2189 131 0 0 chr5 73187928 73188279 -129897253 - AluSx SINE Alu 0 351 1 2049 122 17 0 chr5 73188879 73189173 -129896359 - AluSx SINE Alu -13 299 1 13942 123 55 16 chr5 73189178 73190718 -129894814 + Tigger1 DNA MER2_type 24 1687 -731 1892 152 10 3 chr5 73190718 73191027 -129894505 + AluSx SINE Alu 1 311 -1 13942 123 55 16 chr5 73191027 73191790 -129893742 + Tigger1 DNA MER2_type 1687 2418 0 2970 241 93 27 chr5 73192048 73192285 -129893247 - L1MC4a LINE L1 -2439 3707 3487 678 190 0 0 chr5 73192285 73192424 -129893108 - FLAM_A SINE Alu 0 139 1 2970 241 93 27 chr5 73192424 73193329 -129892203 - L1MC4a LINE L1 -2659 3487 2489 2621 78 23 20 chr5 73193331 73193727 -129891805 - L1MA3 LINE L1 0 6305 5909 390 312 45 19 chr5 73243750 73243904 -129841628 - L1ME4a LINE L1 -11 6110 5953 204 67 0 0 chr5 73243909 73243939 -129841593 + (TG)n Simple_repeat Simple_repeat 2 31 0 2772 121 15 5 chr5 73243943 73244348 -129841184 - MSTB LTR MaLR -17 409 1 273 210 0 0 chr5 73244544 73244606 -129840926 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 1766 157 7 0 chr5 73244895 73245176 -129840356 - AluJb SINE Alu -15 297 15 189 176 0 0 chr5 73246611 73246645 -129838887 + MIR3 SINE MIR 123 156 -52 183 129 0 0 chr5 73247084 73247115 -129838417 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 781 256 6 0 chr5 73247274 73247454 -129838078 - MER5A DNA MER1_type -1 188 8 503 221 188 0 chr5 73247472 73247626 -129837906 + MER5A DNA MER1_type 7 189 0 2712 219 79 40 chr5 73248037 73248910 -129836622 + L1ME1 LINE L1 5255 6161 -5 1744 150 36 0 chr5 73249201 73249516 -129836016 + AluSx SINE Alu 1 325 0 368 178 140 56 chr5 73249686 73249793 -129835739 + MIR SINE MIR 60 175 -87 426 222 28 37 chr5 73249803 73249911 -129835621 - L1MC2 LINE L1 -10 6334 6228 * 2945 171 29 115 chr5 73249906 73250608 -129834924 - L1MC1 LINE L1 -229 6104 5464 189 343 0 0 chr5 73250611 73250678 -129834854 + MIR SINE MIR 167 233 -29 1753 196 48 30 chr5 73250912 73250947 -129834585 - MLT2D LTR ERVL -8 406 373 1065 24 53 0 chr5 73250947 73251116 -129834416 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 1753 196 48 30 chr5 73251116 73251479 -129834053 - MLT2D LTR ERVL -41 373 1 280 340 28 61 chr5 73252337 73252549 -129832983 + MIR SINE MIR 3 207 -55 304 320 0 0 chr5 73252565 73252640 -129832892 - MIR3 SINE MIR -45 163 89 881 189 97 60 chr5 73252707 73252792 -129832740 - MIR SINE MIR -3 259 179 1596 216 156 67 chr5 73252792 73253390 -129832142 - MLT1E1 LTR MaLR 0 654 4 881 189 97 60 chr5 73253390 73253552 -129831980 - MIR SINE MIR -83 179 3 2066 161 30 8 chr5 73254647 73255014 -129830518 + THE1C LTR MaLR 1 375 0 1829 139 3 3 chr5 73255223 73255542 -129829990 + AluSx SINE Alu 1 312 0 3313 149 9 19 chr5 73256807 73257181 -129828351 + MER6A DNA MER2_type 1 370 -495 2120 84 14 0 chr5 73257181 73257467 -129828065 - AluSq SINE Alu -23 290 1 3313 149 9 19 chr5 73257467 73257627 -129827905 + MER6A DNA MER2_type 370 530 -75 1348 201 0 34 chr5 73257632 73257666 -129827866 - AluJo SINE Alu -4 308 274 207 0 0 0 chr5 73257666 73257689 -129827843 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1348 201 0 34 chr5 73257689 73257952 -129827580 - AluJo SINE Alu -38 274 21 376 169 0 0 chr5 73257959 73258018 -129827514 - MER6A DNA MER2_type -611 4294967290 -64 349 214 30 46 chr5 73258142 73258289 -129827243 - MLT1K LTR MaLR 0 615 449 374 230 30 40 chr5 73258391 73258491 -129827041 - MLT1L LTR MaLR -354 261 163 732 292 115 72 chr5 73258703 73259672 -129825860 - L2 LINE L2 -1 3271 2253 352 330 10 0 chr5 73259685 73259788 -129825744 - L2 LINE L2 -233 3080 2977 1246 65 140 65 chr5 73260249 73260463 -129825069 + MER30 DNA MER1_type 1 230 0 452 232 0 56 chr5 73262277 73262419 -129823113 - MIR SINE MIR -51 211 78 636 177 5 181 chr5 73263403 73263552 -129821980 - MER5B DNA MER1_type -1 177 76 10061 61 12 1 chr5 73263552 73265596 -129819936 - L1PA6 LINE L1 -3 6151 4079 636 177 5 181 chr5 73265596 73265661 -129819871 - MER5B DNA MER1_type -102 76 1 371 280 51 0 chr5 73265937 73266055 -129819477 + MER5A DNA MER1_type 37 160 -29 745 227 48 92 chr5 73266961 73267340 -129818192 + L1MEd LINE L1 895 1256 -4863 34 0 0 0 chr5 73268833 73268867 -129816665 + AT_rich Low_complexity Low_complexity 1 34 0 5793 165 16 24 chr5 73268964 73270228 -129815304 - L1PA16 LINE L1 -13 6153 4913 1648 130 134 0 chr5 73270228 73270489 -129815043 - AluSx SINE Alu -16 296 1 5793 165 16 24 chr5 73270489 73271118 -129814414 - L1PA16 LINE L1 -1253 4913 4280 255 251 264 12 chr5 73272098 73272261 -129813271 + L3 LINE CR1 1371 1574 -3 219 341 65 29 chr5 73272696 73272834 -129812698 + L2 LINE L2 3128 3270 -2 476 297 104 0 chr5 73273128 73273310 -129812222 - LTR16C LTR ERVL -16 475 275 720 230 52 38 chr5 73274249 73274481 -129811051 + MIR SINE MIR 11 241 -21 276 322 119 12 chr5 73274499 73274708 -129810824 + MIR SINE MIR 24 253 -9 3377 111 4 39 chr5 73274895 73275428 -129810104 + L1MA5A LINE L1 5639 6152 -145 341 253 23 0 chr5 73275942 73276029 -129809503 + L1MC4 LINE L1 6608 6696 -1346 386 245 64 0 chr5 73276286 73276380 -129809152 - MIR SINE MIR -70 192 93 189 0 0 0 chr5 73277314 73277335 -129808197 + (T)n Simple_repeat Simple_repeat 1 21 0 225 240 0 0 chr5 73278803 73278853 -129806679 + CT-rich Low_complexity Low_complexity 3 52 0 333 287 37 0 chr5 73279476 73279584 -129805948 + LTR16A1 LTR ERVL 3 114 -343 704 249 49 16 chr5 73279636 73279821 -129805711 + LTR16A1 LTR ERVL 267 457 0 253 235 12 47 chr5 73279825 73279910 -129805622 + MIR3 SINE MIR 120 201 -7 1354 107 92 10 chr5 73280568 73280764 -129804768 + AluJb SINE Alu 84 295 -17 224 279 197 0 chr5 73281425 73281547 -129803985 + MIR3 SINE MIR 7 152 -56 219 326 32 0 chr5 73281566 73281661 -129803871 - MIR3 SINE MIR -1 207 110 1132 189 54 114 chr5 73281949 73282335 -129803197 + MLT1A1 LTR MaLR 2 364 -1 579 301 102 52 chr5 73283045 73283467 -129802065 - L3 LINE CR1 -24 1553 1111 387 0 0 0 chr5 73283870 73283913 -129801619 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2457 93 47 16 chr5 73284158 73284522 -129801010 + THE1C LTR MaLR 1 375 0 10298 113 36 14 chr5 73284522 73286068 -129799464 + THE1C-int LTR MaLR 1 1580 0 2200 129 44 16 chr5 73286068 73286433 -129799099 + THE1C LTR MaLR 1 375 0 254 116 0 23 chr5 73287450 73287493 -129798039 + L2 LINE L2 3267 3308 -5 646 278 25 0 chr5 73287852 73288014 -129797518 - MER45A DNA AcHobo 0 178 13 391 264 138 13 chr5 73288244 73288403 -129797129 - MIR SINE MIR -64 198 20 2461 86 0 0 chr5 73289034 73289338 -129796194 - AluY SINE Alu -7 304 1 1936 136 56 44 chr5 73289601 73289961 -129795571 - THE1B LTR MaLR 0 364 1 2256 140 9 0 chr5 73289962 73290311 -129795221 - MER47A DNA MER2_type -14 352 1 422 237 53 8 chr5 73292572 73292703 -129792829 - MIR SINE MIR -3 259 123 268 284 45 0 chr5 73292901 73292989 -129792543 + L2 LINE L2 2914 3005 -267 2882 161 74 86 chr5 73292990 73293692 -129791840 - LTR8A LTR ERV1 0 727 34 352 306 73 0 chr5 73293768 73293892 -129791640 + L2 LINE L2 3137 3269 -3 267 215 0 0 chr5 73294549 73294614 -129790918 + CT-rich Low_complexity Low_complexity 2 66 0 491 233 69 86 chr5 73294659 73294904 -129790628 + MER34 LTR ERV1 26 266 -276 * 607 204 9 0 chr5 73294899 73295007 -129790525 - MLT2B1 LTR ERVL -67 453 345 2539 195 18 5 chr5 73295013 73295459 -129790073 - LTR32 LTR ERVL -5 466 15 1624 205 28 64 chr5 73295458 73295819 -129789713 - MLT2B1 LTR ERVL -171 349 2 * 406 209 144 76 chr5 73295819 73296082 -129789450 + MER34 LTR ERV1 279 537 -5 679 235 74 12 chr5 73296404 73296566 -129788966 + MLT1J LTR MaLR 28 199 -312 229 207 0 35 chr5 73296706 73296764 -129788768 + L2 LINE L2 3258 3313 0 23 0 0 0 chr5 73297808 73297831 -129787701 + AT_rich Low_complexity Low_complexity 1 23 0 215 160 20 60 chr5 73298451 73298501 -129787031 - L2 LINE L2 -32 3281 3234 343 38 38 0 chr5 73298751 73298804 -129786728 + (TG)n Simple_repeat Simple_repeat 1 55 0 261 173 19 0 chr5 73298814 73298866 -129786666 + MER5A DNA MER1_type 132 184 -5 627 291 94 8 chr5 73299209 73299528 -129786004 - L1ME LINE L1 -458 5663 5316 409 261 24 34 chr5 73299684 73299863 -129785669 + MIR SINE MIR 36 212 -50 200 182 0 0 chr5 73300149 73300182 -129785350 + CT-rich Low_complexity Low_complexity 1 33 0 258 266 16 16 chr5 73300184 73300248 -129785284 - L2 LINE L2 -51 3221 3158 233 337 10 20 chr5 73300415 73300513 -129785019 - MIR SINE MIR -92 116 20 297 388 16 0 chr5 73302971 73303100 -129782432 - MIR SINE MIR -62 146 16 390 262 57 21 chr5 73304414 73304555 -129780977 - MIR SINE MIR 0 262 117 347 322 35 0 chr5 73304557 73304759 -129780773 - L1ME LINE L1 -966 5180 4972 180 333 0 42 chr5 73305042 73305138 -129780394 - MIR SINE MIR -81 127 36 315 265 61 0 chr5 73305536 73305634 -129779898 + L2 LINE L2 3210 3313 0 239 290 16 0 chr5 73306420 73306482 -129779050 + L2 LINE L2 3203 3265 -7 278 282 63 0 chr5 73306496 73306629 -129778903 + MIR SINE MIR 58 200 -62 387 259 9 19 chr5 73306775 73306883 -129778649 - Charlie7 DNA MER1_type -2499 113 7 3011 198 35 86 chr5 73306991 73307495 -129778037 - MER21B LTR ERV1 -111 752 301 2342 121 16 13 chr5 73307495 73307867 -129777665 - THE1C LTR MaLR -2 373 1 3011 198 35 86 chr5 73307867 73308154 -129777378 - MER21B LTR ERV1 -562 301 1 414 307 122 21 chr5 73308582 73308674 -129776858 - L2 LINE L2 0 3313 3232 2424 142 25 2 chr5 73308674 73309068 -129776464 - MER57A LTR ERV1 0 403 1 414 307 122 21 chr5 73309068 73309262 -129776270 - L2 LINE L2 -81 3232 2998 283 295 33 74 chr5 73311173 73311417 -129774115 - L2 LINE L2 -2934 380 147 2204 190 40 9 chr5 73311663 73312116 -129773416 - MLT1C LTR MaLR 0 467 1 431 241 0 0 chr5 73312930 73313013 -129772519 + L2 LINE L2 3188 3270 -2 578 312 77 16 chr5 73313073 73313320 -129772212 + MIR SINE MIR 1 262 0 545 242 61 42 chr5 73314391 73314556 -129770976 - MIR SINE MIR -80 182 15 210 37 0 0 chr5 73314631 73314658 -129770874 + (AAGTG)n Simple_repeat Simple_repeat 5 31 0 1104 260 131 23 chr5 73314904 73315292 -129770240 - MER57B LTR ERV1 -4 430 1 464 265 42 9 chr5 73315317 73315454 -129770078 - MIR SINE MIR -63 145 5 1589 94 75 0 chr5 73315561 73315773 -129769759 - MER30 DNA MER1_type -2 228 1 544 306 33 17 chr5 73315798 73315978 -129769554 - MIR SINE MIR -71 191 9 194 263 0 12 chr5 73316826 73316906 -129768626 + CT-rich Low_complexity Low_complexity 1 79 0 14556 125 18 9 chr5 73317104 73319029 -129766503 - Tigger1 DNA MER2_type -1 2417 467 1991 163 3 0 chr5 73319029 73319336 -129766196 + AluSx SINE Alu 1 308 -4 14556 125 18 9 chr5 73319336 73319601 -129765931 - Tigger1 DNA MER2_type -1951 467 206 257 353 0 0 chr5 73319925 73319993 -129765539 - L2 LINE L2 -92 3180 3113 259 286 57 0 chr5 73320639 73320709 -129764823 - L2 LINE L2 -256 3057 2984 324 104 45 19 chr5 73321066 73321135 -129764397 - L1PA2 LINE L1 -25 6149 6057 252 0 0 0 chr5 73321148 73321176 -129764356 + (TAA)n Simple_repeat Simple_repeat 3 30 0 352 44 0 0 chr5 73322954 73322999 -129762533 - MADE1 DNA Mariner 0 80 36 790 212 0 0 chr5 73323310 73323442 -129762090 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr5 73324098 73324119 -129761413 + AT_rich Low_complexity Low_complexity 1 21 0 239 286 54 0 chr5 73324402 73324458 -129761074 - L2 LINE L2 -10 3262 3204 206 348 0 14 chr5 73326194 73326263 -129759269 - L2 LINE L2 0 3272 3205 237 33 0 0 chr5 73326652 73326682 -129758850 + (CA)n Simple_repeat Simple_repeat 2 31 0 691 197 17 73 chr5 73326683 73326791 -129758741 + MER97c DNA MER1_type? 11 107 -983 2010 110 53 3 chr5 73326791 73327073 -129758459 - AluSg SINE Alu -14 296 1 691 197 17 73 chr5 73327073 73327142 -129758390 + MER97c DNA MER1_type? 107 178 -912 390 274 70 37 chr5 73327239 73327454 -129758078 - L1ME4a LINE L1 -158 5963 5742 976 237 61 74 chr5 73327892 73328416 -129757116 - HAL1b LINE L1 -640 708 192 2188 110 0 10 chr5 73330037 73330337 -129755195 - AluSx SINE Alu -15 297 1 2155 83 22 0 chr5 73330606 73330910 -129754622 + AluSx SINE Alu 1 310 0 319 260 0 31 chr5 73330922 73331018 -129754514 - MIR SINE MIR -11 251 159 * 654 256 89 15 chr5 73331015 73331218 -129754314 + MIR SINE MIR 34 251 -11 350 211 105 44 chr5 73331237 73331351 -129754181 - MIR SINE MIR -105 157 37 1818 187 91 8 chr5 73331982 73332356 -129753176 + MER82 DNA MER2_type 2 406 -247 8415 177 38 9 chr5 73332367 73333956 -129751576 + L1PBa LINE L1 6 1640 -5223 7280 142 57 9 chr5 73333928 73336551 -129748981 + L1PB2 LINE L1 8 2750 -3453 * 43428 37 24 9 chr5 73336548 73342609 -129742923 - L1PA3 LINE L1 0 6155 4 12554 174 17 8 chr5 73342605 73346052 -129739480 + L1PB2 LINE L1 2729 6205 -3 * 245 260 27 0 chr5 73346068 73346122 -129739410 + MER82 DNA MER2_type 390 445 -208 707 191 7 26 chr5 73346122 73346274 -129739258 + MER4C LTR ERV1 1 149 -316 1047 217 56 28 chr5 73346280 73346671 -129738861 + MER4C LTR ERV1 276 465 0 869 262 62 14 chr5 73346671 73346871 -129738661 + MER82 DNA MER2_type 444 653 0 675 297 157 3 chr5 73347042 73347355 -129738177 + MLT1H LTR MaLR 188 548 -1 2211 102 0 52 chr5 73347588 73347913 -129737619 - AluSx SINE Alu -4 308 1 21 36 0 0 chr5 73348233 73348261 -129737271 + AT_rich Low_complexity Low_complexity 1 28 0 645 301 5 5 chr5 73348851 73349037 -129736495 + MIR SINE MIR 19 204 -58 307 99 52 0 chr5 73349137 73349199 -129736333 + L1PA2 LINE L1 6063 6149 -25 1136 138 12 6 chr5 73349285 73349452 -129736080 - AluSx SINE Alu -144 168 1 5806 196 62 18 chr5 73349452 73351428 -129734104 - L1M4 LINE L1 -2972 3410 1340 857 211 43 24 chr5 73351435 73351643 -129733889 + AluJo SINE Alu 84 295 -17 1673 147 62 20 chr5 73351665 73352006 -129733526 - L1M4 LINE L1 -5044 1340 986 3852 191 47 16 chr5 73352113 73352851 -129732681 - L1M4 LINE L1 -5621 763 3 198 0 0 0 chr5 73353374 73353396 -129732136 + (T)n Simple_repeat Simple_repeat 1 22 0 196 328 0 0 chr5 73353557 73353618 -129731914 - L3b LINE CR1 -243 1340 1280 1271 309 89 14 chr5 73353909 73354495 -129731037 - L1ME3A LINE L1 -258 5912 5283 303 256 89 45 chr5 73354521 73354767 -129730765 - L1ME3A LINE L1 -2814 3332 3076 213 300 50 0 chr5 73355417 73355477 -129730055 - MIR SINE MIR -103 105 43 285 257 0 76 chr5 73355683 73355788 -129729744 - MIR SINE MIR 0 262 166 989 253 45 88 chr5 73356365 73356851 -129728681 + MLT1J LTR MaLR 45 509 -2 298 192 115 0 chr5 73357566 73357644 -129727888 - MIR SINE MIR -102 160 74 26 82 0 0 chr5 73358496 73358557 -129726975 + AT_rich Low_complexity Low_complexity 1 61 0 1929 109 0 35 chr5 73358593 73358876 -129726656 - AluSg SINE Alu -15 295 23 22474 96 12 26 chr5 73358894 73365179 -129720353 - L1PA7 LINE L1 -2 6152 1 2176 125 3 0 chr5 73365179 73365475 -129720057 - AluSx SINE Alu -15 297 1 40982 36 26 2 chr5 73365600 73371328 -129714204 + L1PA3 LINE L1 286 6155 0 6906 227 11 11 chr5 73371328 73373027 -129712505 + L1 LINE L1 2194 3892 -2254 284 193 0 18 chr5 73373138 73373195 -129712337 + MLT1D LTR MaLR 448 503 -2 282 289 29 19 chr5 73373208 73373312 -129712220 + MER5B DNA MER1_type 74 178 0 657 294 208 16 chr5 73373317 73374010 -129711522 + L2 LINE L2 1800 2625 -689 2116 117 3 13 chr5 73374927 73375234 -129710298 - AluSx SINE Alu -8 304 1 373 350 43 0 chr5 73375277 73375394 -129710138 + L2 LINE L2 3137 3258 -14 2955 231 53 56 chr5 73375623 73376464 -129709068 + L1MDa LINE L1 26 1012 -5528 2176 100 7 0 chr5 73376464 73376765 -129708767 - AluSp SINE Alu 0 303 1 2955 231 53 56 chr5 73376765 73377215 -129708317 + L1MDa LINE L1 1012 1462 -5078 809 226 11 0 chr5 73377208 73377398 -129708134 - L1MA4 LINE L1 -21 6279 6088 * 1010 274 44 50 chr5 73377406 73377474 -129708058 + L1ME3A LINE L1 775 842 -5554 2104 138 165 8 chr5 73377474 73377844 -129707688 - MSTA LTR MaLR 0 428 1 1010 274 44 50 chr5 73377844 73378355 -129707177 + L1ME3A LINE L1 842 1327 -5069 740 243 147 52 chr5 73378385 73379036 -129706496 + L1ME3A LINE L1 2051 2717 -3689 1911 151 3 0 chr5 73379094 73379378 -129706154 - AluSx SINE Alu -27 285 1 787 311 117 22 chr5 73380318 73381199 -129704333 + L1ME3A LINE L1 3952 4916 -1490 308 267 26 17 chr5 73381887 73382003 -129703529 + LTR33A LTR ERVL 404 520 -3 4766 166 36 9 chr5 73382054 73382084 -129703448 - MER6 DNA MER2_type 0 865 837 2273 121 50 9 chr5 73382084 73382407 -129703125 + MER1B DNA MER1_type 1 336 -1 4766 166 36 9 chr5 73382407 73383217 -129702315 - MER6 DNA MER2_type -28 837 3 1370 188 14 58 chr5 73383343 73383635 -129701897 + AluJb SINE Alu 1 279 -33 288 0 0 0 chr5 73383647 73383679 -129701853 + (CA)n Simple_repeat Simple_repeat 2 33 0 2207 120 3 0 chr5 73383741 73384042 -129701490 - AluSp SINE Alu -11 302 1 271 260 0 13 chr5 73384186 73384263 -129701269 + L1ME3A LINE L1 5557 5632 -2436 1451 204 43 0 chr5 73384285 73384609 -129700923 - L1 LINE L1 -2595 3551 3214 925 95 36 0 chr5 73384612 73384749 -129700783 + L1MA10 LINE L1 6193 6334 0 1190 221 14 46 chr5 73384749 73384840 -129700692 + L1ME3A LINE L1 5661 5753 -677 2286 184 124 44 chr5 73384840 73385326 -129700206 + MLT1F1 LTR MaLR 1 533 -34 1488 153 30 8 chr5 73385326 73385588 -129699944 - AluJb SINE Alu -44 268 1 2286 184 124 44 chr5 73385588 73385623 -129699909 + MLT1F1 LTR MaLR 533 564 -3 1190 221 14 46 chr5 73385623 73386038 -129699494 + L1ME3A LINE L1 5753 6144 -286 185 297 14 14 chr5 73386915 73386989 -129698543 + L3 LINE CR1 854 927 -650 574 276 109 5 chr5 73387601 73387822 -129697710 + L3 LINE CR1 1180 1423 -154 345 213 9 74 chr5 73387861 73387969 -129697563 - MIR SINE MIR -126 136 36 315 219 0 41 chr5 73388867 73388940 -129696592 + MER5A DNA MER1_type 7 76 -113 44206 41 3 3 chr5 73388969 73395085 -129690447 - L1PA4 LINE L1 0 6155 39 602 240 8 0 chr5 73395085 73395214 -129690318 + MER5A DNA MER1_type 59 188 -1 245 50 0 25 chr5 73396845 73396885 -129688647 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 502 233 50 126 chr5 73397428 73397690 -129687842 - MIR SINE MIR -10 252 11 410 266 187 7 chr5 73397694 73397833 -129687699 - MER5A DNA MER1_type -1 188 25 198 331 41 25 chr5 73398249 73398370 -129687162 + MIR SINE MIR 30 152 -110 2668 107 114 8 chr5 73398375 73398760 -129686772 + MSTA LTR MaLR 3 428 0 319 169 49 2 chr5 73400311 73400536 -129684996 + AluJo SINE Alu 23 291 -11 267 327 30 10 chr5 73400874 73400975 -129684557 + MIR SINE MIR 134 236 -26 1821 49 22 0 chr5 73401333 73401557 -129683975 - L1PA4 LINE L1 0 6155 5927 510 262 98 70 chr5 73402574 73402733 -129682799 - L2 LINE L2 0 3313 3141 1925 142 0 43 chr5 73402733 73403058 -129682474 - AluJo SINE Alu -1 311 1 510 262 98 70 chr5 73403058 73403184 -129682348 - L2 LINE L2 -172 3141 3020 717 254 145 9 chr5 73403961 73404189 -129681343 - MIR SINE MIR 0 262 4 339 260 106 0 chr5 73404556 73404660 -129680872 - MIR3 SINE MIR -54 154 40 257 210 220 20 chr5 73405601 73405701 -129679831 - L1ME3A LINE L1 -17 6153 6034 246 244 26 51 chr5 73407057 73407135 -129678397 - L2 LINE L2 -20 3252 3177 549 307 57 103 chr5 73407136 73407641 -129677891 + MLT1K LTR MaLR 18 499 -89 3275 186 18 64 chr5 73409300 73410237 -129675295 + L1MB1 LINE L1 4942 5830 -338 2278 100 0 10 chr5 73410237 73410536 -129674996 + AluSc SINE Alu 1 296 -13 3275 186 18 64 chr5 73410536 73410673 -129674859 + L1MB1 LINE L1 5830 5972 -196 1838 111 167 84 chr5 73410675 73411046 -129674486 - MER4A LTR ERV1 0 664 263 624 90 10 30 chr5 73411046 73411146 -129674386 - MER4A LTR ERV1 -566 98 1 14116 106 51 12 chr5 73411158 73411448 -129674084 - MER4A-int LTR ERV1 -5 6593 6316 2321 112 0 0 chr5 73411448 73411751 -129673781 - AluSg SINE Alu -5 305 3 14116 106 51 12 chr5 73411751 73414101 -129671431 - MER4A-int LTR ERV1 -282 6316 3842 3405 137 80 49 chr5 73414105 73414266 -129671266 - MER4A-int LTR ERV1 -2917 3681 3526 2173 142 0 0 chr5 73414266 73414576 -129670956 + AluSx SINE Alu 1 310 -2 3405 137 80 49 chr5 73414576 73415179 -129670353 - MER4A-int LTR ERV1 -3072 3526 2882 2043 135 3 0 chr5 73415179 73415468 -129670064 - AluSx SINE Alu -22 290 1 3405 137 80 49 chr5 73415468 73415619 -129669913 - MER4A-int LTR ERV1 -3716 2882 2737 1313 158 71 0 chr5 73415619 73415859 -129669673 + LTR8 LTR ERV1 1 257 -434 3035 101 72 97 chr5 73415860 73416581 -129668951 - MER4A-int LTR ERV1 -3366 1649 947 261 0 0 0 chr5 73416598 73416627 -129668905 + (CA)n Simple_repeat Simple_repeat 2 30 0 5515 102 74 22 chr5 73416628 73417534 -129667998 - LTR49-int LTR ERV1 -5612 1146 194 1245 232 46 13 chr5 73417593 73417899 -129667633 - LTR49-int LTR ERV1 -4171 2160 1845 677 206 22 11 chr5 73418123 73418303 -129667229 + L1MB8 LINE L1 4581 4762 -1384 2015 129 0 0 chr5 73418956 73419235 -129666297 + AluSx SINE Alu 1 279 -33 249 108 0 0 chr5 73419235 73419272 -129666260 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 840 269 48 36 chr5 73419683 73419932 -129665600 + MIR SINE MIR 8 259 -3 2198 190 39 9 chr5 73419986 73420773 -129664759 + L1MB8 LINE L1 4801 5611 -567 449 213 0 0 chr5 73420774 73420854 -129664678 + AluJ/FLAM SINE Alu 5 84 -228 951 196 120 4 chr5 73420854 73421104 -129664428 + L1MB8 LINE L1 5595 5873 -305 2949 157 17 104 chr5 73421106 73422400 -129663132 - L1M2 LINE L1 -490 5822 4647 191 329 96 0 chr5 73422425 73422498 -129663034 - MIR SINE MIR -109 153 74 191 388 36 24 chr5 73422860 73423025 -129662507 + L2 LINE L2 2887 3053 -219 392 324 71 24 chr5 73424635 73424805 -129660727 + MER5B DNA MER1_type 1 178 0 233 94 0 0 chr5 73425289 73425321 -129660211 - L2 LINE L2 -259 3054 3023 190 303 0 15 chr5 73425333 73425399 -129660133 + L2 LINE L2 3249 3313 0 5858 230 87 43 chr5 73426530 73428322 -129657210 - L1MC1 LINE L1 0 6333 4622 375 188 24 35 chr5 73428322 73428407 -129657125 + AluSc SINE Alu 1 84 -215 5858 230 87 43 chr5 73428407 73430226 -129655306 - L1MC1 LINE L1 -1711 4622 2460 1948 166 77 0 chr5 73430632 73430970 -129654562 - THE1B LTR MaLR 0 364 1 11498 103 5 2 chr5 73430970 73432545 -129652987 - THE1B-int LTR MaLR 0 1580 1 2065 108 108 15 chr5 73432545 73432878 -129652654 - THE1B LTR MaLR 0 364 1 281 294 49 10 chr5 73433171 73433273 -129652259 - MIR SINE MIR -94 168 63 820 230 8 6 chr5 73433428 73433652 -129651880 - L1PA16 LINE L1 -5 6146 5921 475 287 84 0 chr5 73434090 73434233 -129651299 + MIR SINE MIR 89 243 -19 255 274 168 9 chr5 73434242 73434355 -129651177 - MER94 DNA DNA -1 133 3 247 195 0 0 chr5 73435086 73435127 -129650405 + MIR SINE MIR 216 256 -6 193 243 272 10 chr5 73435957 73436060 -129649472 + L2 LINE L2 2364 2493 -821 548 175 171 26 chr5 73436177 73436273 -129649259 - MER63B DNA MER1_type -750 312 231 4295 157 28 6 chr5 73436273 73436987 -129648545 + MER44D DNA MER2_type 2 603 -2 548 175 171 26 chr5 73436987 73437133 -129648399 - MER63B DNA MER1_type -831 231 7 416 278 139 0 chr5 73437243 73437358 -129648174 - L2 LINE L2 -8 3264 3134 1442 180 42 56 chr5 73437469 73437824 -129647708 + MLT1B LTR MaLR 1 350 -40 372 327 57 39 chr5 73437971 73438356 -129647176 - HAL1b LINE L1 -659 689 298 184 330 174 0 chr5 73438433 73438548 -129646984 + L2 LINE L2 2901 3035 -237 34 24 0 0 chr5 73438760 73438801 -129646731 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr5 73439655 73439677 -129645855 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 73440484 73440519 -129645013 + AT_rich Low_complexity Low_complexity 1 35 0 653 275 67 22 chr5 73440612 73440881 -129644651 + L1MC4a LINE L1 5563 5843 -1965 261 0 0 0 chr5 73441464 73441493 -129644039 + (A)n Simple_repeat Simple_repeat 1 29 0 237 277 0 15 chr5 73442231 73442296 -129643236 - MER91 DNA MER1_type 0 140 77 2355 99 0 0 chr5 73442553 73442855 -129642677 + AluSc SINE Alu 3 304 -5 230 296 11 45 chr5 73443698 73443786 -129641746 - L2 LINE L2 0 3313 3229 194 0 0 37 chr5 73443888 73443915 -129641617 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 27359 103 30 16 chr5 73445267 73450633 -129634899 - L1PA7 LINE L1 -114 6040 605 288 273 61 30 chr5 73451343 73451475 -129634057 + L2 LINE L2 3137 3272 0 188 35 35 0 chr5 73453272 73453301 -129632231 + (TTA)n Simple_repeat Simple_repeat 1 30 0 650 255 51 23 chr5 73454939 73455173 -129630359 + MIR SINE MIR 3 239 -23 353 330 98 15 chr5 73455738 73455941 -129629591 + MIR SINE MIR 9 228 -34 195 329 53 26 chr5 73456746 73456822 -129628710 + MIR SINE MIR 23 100 -162 322 282 101 32 chr5 73457112 73457239 -129628293 + MER5B DNA MER1_type 5 150 -39 233 330 28 28 chr5 73457577 73457683 -129627849 - L2 LINE L2 -50 3263 3158 31391 41 5 0 chr5 73457871 73462219 -129623313 + L1P2 LINE L1 1330 5698 -457 21 0 0 0 chr5 73463122 73463143 -129622389 + AT_rich Low_complexity Low_complexity 1 21 0 419 273 95 25 chr5 73464221 73464563 -129620969 - L1MEd LINE L1 -3819 2396 2078 23 0 0 0 chr5 73464754 73464777 -129620755 + AT_rich Low_complexity Low_complexity 1 23 0 3270 64 32 18 chr5 73464904 73465339 -129620193 + L1PB1 LINE L1 5711 6151 0 1811 160 7 10 chr5 73465462 73465756 -129619776 + AluJo SINE Alu 1 293 -19 794 301 39 35 chr5 73465778 73466466 -129619066 - L1MEd LINE L1 -838 1738 963 21 0 0 0 chr5 73466576 73466597 -129618935 + AT_rich Low_complexity Low_complexity 1 21 0 940 179 70 77 chr5 73466848 73467184 -129618348 - MLT1B LTR MaLR 0 390 1 278 372 8 8 chr5 73467826 73467955 -129617577 + L2 LINE L2 2936 3064 -208 402 284 81 51 chr5 73468285 73468578 -129616954 + LTR33A LTR ERVL 135 461 -62 666 101 0 10 chr5 73468578 73468677 -129616855 - L1MB2 LINE L1 0 6171 6074 402 284 81 51 chr5 73468677 73468722 -129616810 + LTR33A LTR ERVL 461 503 -20 6156 145 17 15 chr5 73468763 73470300 -129615232 + L1PB1 LINE L1 4268 5812 -339 456 19 0 0 chr5 73470300 73470353 -129615179 + (CA)n Simple_repeat Simple_repeat 1 53 0 6156 145 17 15 chr5 73470353 73470691 -129614841 + L1PB1 LINE L1 5812 6148 -3 414 138 0 32 chr5 73470691 73470785 -129614747 + (GGA)n Simple_repeat Simple_repeat 1 91 0 393 153 0 0 chr5 73470952 73471011 -129614521 + Tigger3(Golem) DNA MER2_type 1 59 -2970 276 225 375 0 chr5 73471015 73471095 -129614437 + Tigger3(Golem) DNA MER2_type 2910 3019 -10 591 377 40 23 chr5 73471480 73471960 -129613572 + ERVL LTR ERVL 773 1260 -4504 806 234 51 72 chr5 73471968 73472203 -129613329 + ERVL LTR ERVL 4441 4670 -1094 990 311 32 3 chr5 73472477 73472818 -129612714 + ERVL LTR ERVL 5046 5396 -368 786 269 76 48 chr5 73473132 73473235 -129612297 + LTR33A LTR ERVL 1 100 -423 252 0 0 0 chr5 73473235 73473263 -129612269 + (TG)n Simple_repeat Simple_repeat 1 28 0 786 269 76 48 chr5 73473263 73473475 -129612057 + LTR33A LTR ERVL 100 325 -198 463 206 0 0 chr5 73473493 73473585 -129611947 + LTR33A LTR ERVL 432 523 0 3631 149 33 15 chr5 73473702 73474314 -129611218 - L1MB7 LINE L1 -16 6168 5546 573 272 110 55 chr5 73474321 73474759 -129610773 - L1ME LINE L1 -297 5824 5363 265 280 178 0 chr5 73475226 73475360 -129610172 + MIR SINE MIR 37 191 -65 286 264 22 22 chr5 73475879 73475970 -129609562 + MLT1J LTR MaLR 95 185 -326 184 317 20 136 chr5 73476510 73476709 -129608823 - L2 LINE L2 -107 3165 2990 345 174 23 12 chr5 73476979 73477065 -129608467 + MER113 DNA MER1_type? 7 93 -428 401 251 186 27 chr5 73477397 73477658 -129607874 - MLT1J2 LTR MaLR -36 373 67 2460 185 31 39 chr5 73478016 73478525 -129607007 - MLT1D LTR MaLR 0 505 1 554 223 73 128 chr5 73478613 73478887 -129606645 + MER102a DNA MER1_type 66 324 -6 295 307 0 0 chr5 73479724 73479825 -129605707 + MER113 DNA MER1_type? 6 106 -415 2319 135 33 28 chr5 73480015 73480377 -129605155 + THE1B LTR MaLR 1 364 0 2133 106 3 0 chr5 73481084 73481367 -129604165 + AluSx SINE Alu 10 293 -19 241 329 96 0 chr5 73481736 73481882 -129603650 + MIR3 SINE MIR 49 208 0 1007 216 175 62 chr5 73483323 73483838 -129601694 + HAL1 LINE L1 1604 2176 -331 569 290 80 8 chr5 73483838 73484076 -129601456 + L2 LINE L2 3059 3313 0 517 222 126 29 chr5 73484152 73484359 -129601173 + HAL1 LINE L1 2276 2502 -5 2015 127 38 0 chr5 73484407 73484698 -129600834 - AluSg SINE Alu -8 302 1 320 202 18 110 chr5 73484954 73485063 -129600469 + MIR SINE MIR 56 154 -108 1351 157 7 23 chr5 73485703 73485982 -129599550 - MER4A LTR ERV1 -70 594 261 598 134 21 10 chr5 73485982 73486079 -129599453 - MER4A LTR ERV1 -566 98 1 540 315 38 40 chr5 73486166 73486537 -129598995 - L1MEd LINE L1 -5218 901 532 953 303 44 16 chr5 73486648 73487011 -129598521 - L1MEd LINE L1 -5736 383 11 39 22 0 0 chr5 73487369 73487415 -129598117 + AT_rich Low_complexity Low_complexity 1 46 0 1135 177 40 4 chr5 73487809 73488058 -129597474 + L1M3f LINE L1 705 962 -4366 5573 93 3 3 chr5 73488060 73488770 -129596762 - L1PA7 LINE L1 -3 6151 5442 24 32 0 0 chr5 73489440 73489471 -129596061 + AT_rich Low_complexity Low_complexity 1 31 0 2385 163 67 0 chr5 73489471 73489889 -129595643 - L1PA16 LINE L1 -9 6157 5712 2001 151 0 3 chr5 73490183 73490487 -129595045 + AluSx SINE Alu 1 303 -9 972 65 0 58 chr5 73490489 73490628 -129594904 + AluY SINE Alu 175 305 -6 216 0 0 0 chr5 73491012 73491036 -129594496 + (A)n Simple_repeat Simple_repeat 1 24 0 227 233 133 93 chr5 73492178 73492328 -129593204 + MER5A DNA MER1_type 34 189 0 351 93 19 0 chr5 73492401 73492455 -129593077 - L1PB2 LINE L1 -2 6149 6095 350 281 9 61 chr5 73492458 73492524 -129593008 - L2 LINE L2 -9 3263 3204 1927 208 43 41 chr5 73492524 73492990 -129592542 - MLT1C LTR MaLR 0 467 1 350 281 9 61 chr5 73492990 73493037 -129592495 - L2 LINE L2 -68 3204 3156 21 0 0 0 chr5 73594556 73594577 -129490955 + GC_rich Low_complexity Low_complexity 1 21 0 395 35 35 47 chr5 73595767 73595853 -129489679 + (TGAA)n Simple_repeat Simple_repeat 4 88 0 1203 47 12 6 chr5 73595854 73596026 -129489506 + (GAATG)n Satellite Satellite 3 175 0 1093 74 0 14 chr5 73596051 73596276 -129489256 + (GAATG)n Satellite Satellite 1 221 0 982 107 6 6 chr5 73596328 73596506 -129489026 + (GAATG)n Satellite Satellite 1 178 0 1040 105 0 5 chr5 73596525 73596745 -129488787 + (GAATG)n Satellite Satellite 1 219 0 879 91 5 48 chr5 73596756 73596942 -129488590 + (GAATG)n Satellite Satellite 3 180 0 1016 82 0 22 chr5 73596976 73597159 -129488373 + (GAATG)n Satellite Satellite 1 179 0 1236 43 0 33 chr5 73597170 73597391 -129488141 + (GAATG)n Satellite Satellite 1 213 0 897 145 0 0 chr5 73597403 73597582 -129487950 + (GAATG)n Satellite Satellite 1 179 0 1034 89 0 29 chr5 73597593 73597944 -129487588 + (GAATG)n Satellite Satellite 1 340 0 286 135 0 64 chr5 73597961 73598102 -129487430 + (GAATG)n Satellite Satellite 1 132 0 705 87 0 24 chr5 73598303 73598430 -129487102 + (GAATG)n Simple_repeat Simple_repeat 2 125 0 1449 72 3 6 chr5 73598632 73599087 -129486445 + (GAATG)n Satellite Satellite 1 633 0 923 113 0 27 chr5 73599102 73599287 -129486245 + (GAATG)n Satellite Satellite 1 180 0 1287 95 0 2 chr5 73599303 73599656 -129485876 + (GAATG)n Satellite Satellite 1 532 0 1293 109 0 4 chr5 73599674 73600254 -129485278 + (GAATG)n Satellite Satellite 1 755 0 278 87 22 0 chr5 73600254 73600300 -129485232 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 258 95 0 0 chr5 73600484 73600526 -129485006 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 421 155 9 9 chr5 73600591 73600707 -129484825 + (CATTC)n Satellite Satellite 5 120 0 799 62 0 72 chr5 73600744 73600938 -129484594 + (CATTC)n Satellite Satellite 1 180 0 1178 56 0 6 chr5 73600956 73601116 -129484416 + (CATTC)n Satellite Satellite 2 160 0 1071 133 0 15 chr5 73601154 73601856 -129483676 + (CATTC)n Satellite Satellite 1 691 0 946 117 6 6 chr5 73601871 73602228 -129483304 + (CATTC)n Satellite Satellite 1 357 0 1053 129 0 3 chr5 73602283 73602639 -129482893 + (CATTC)n Satellite Satellite 1 356 0 969 123 0 0 chr5 73602660 73602839 -129482693 + (CATTC)n Satellite Satellite 2 180 0 1191 94 0 0 chr5 73602879 73603059 -129482473 + (CATTC)n Satellite Satellite 1 180 0 318 147 0 0 chr5 73603070 73603138 -129482394 + (CATTC)n Satellite Satellite 2 69 0 1056 123 0 9 chr5 73603155 73603709 -129481823 + (CATTC)n Satellite Satellite 1 548 0 321 167 0 0 chr5 73603730 73603808 -129481724 + (CATTC)n Satellite Satellite 2 79 0 1317 96 1 2 chr5 73603824 73604778 -129480754 + (CATTC)n Satellite Satellite 1 952 0 1044 128 2 25 chr5 73604816 73605452 -129480080 + (CATTC)n Satellite Satellite 1 621 0 851 129 0 6 chr5 73605463 73605633 -129479899 + (CATTC)n Satellite Satellite 2 170 0 993 118 0 0 chr5 73605658 73605836 -129479696 + (CATTC)n Satellite Satellite 1 178 0 928 118 6 6 chr5 73606806 73606984 -129478548 + (CATTC)n Satellite Satellite 3 180 0 1357 39 0 11 chr5 73607000 73607182 -129478350 + (CATTC)n Satellite Satellite 1 180 0 713 114 8 0 chr5 73607197 73607329 -129478203 + (CATTC)n Satellite Satellite 2 134 0 900 111 0 0 chr5 73607347 73607500 -129478032 + (CATTC)n Satellite Satellite 3 155 0 1149 96 0 0 chr5 73607512 73607690 -129477842 + (CATTC)n Satellite Satellite 3 180 0 953 117 0 6 chr5 73607701 73607880 -129477652 + (CATTC)n Satellite Satellite 2 179 0 1035 117 4 8 chr5 73607943 73608206 -129477326 + (CATTC)n Satellite Satellite 3 263 0 958 128 8 11 chr5 73608221 73608579 -129476953 + (CATTC)n Satellite Satellite 2 358 0 1041 112 1 5 chr5 73608590 73609422 -129476110 + (CATTC)n Satellite Satellite 1 828 0 1104 101 0 0 chr5 73609455 73609633 -129475899 + (CATTC)n Satellite Satellite 3 180 0 1419 39 0 0 chr5 73609649 73609827 -129475705 + (CATTC)n Satellite Satellite 2 179 0 1137 108 2 23 chr5 73609854 73610298 -129475234 + (CATTC)n Satellite Satellite 1 435 0 1099 98 3 44 chr5 73610328 73610703 -129474829 + (CATTC)n Satellite Satellite 1 360 0 1122 127 3 23 chr5 73610714 73611011 -129474521 + (CATTC)n Satellite Satellite 2 292 0 1159 42 0 52 chr5 73611087 73611563 -129473969 + (CATTC)n Satellite Satellite 1 451 0 389 109 0 83 chr5 73611587 73611743 -129473789 + (CATTC)n Satellite Satellite 5 147 0 770 125 5 0 chr5 73611951 73612159 -129473373 + (CATTC)n Satellite Satellite 1 209 0 230 98 45 113 chr5 73612183 73612389 -129473143 + (CAGTC)n Simple_repeat Simple_repeat 1 192 0 1066 114 3 17 chr5 73612604 73612952 -129472580 + (CATTC)n Satellite Satellite 2 344 0 1113 96 0 0 chr5 73612967 73613145 -129472387 + (CATTC)n Satellite Satellite 2 179 0 209 146 21 0 chr5 73613167 73613215 -129472317 + (CATTC)n Satellite Satellite 2 50 0 503 105 5 68 chr5 73613226 73613417 -129472115 + (CATTC)n Satellite Satellite 2 180 0 776 141 0 18 chr5 73613452 73613677 -129471855 + (CATTC)n Satellite Satellite 1 220 0 1442 73 2 15 chr5 73613692 73614396 -129471136 + (CATTC)n Satellite Satellite 1 694 0 978 102 11 6 chr5 73614466 73614643 -129470889 + (CATTC)n Satellite Satellite 1 178 0 1061 96 0 5 chr5 73614670 73614886 -129470646 + (CATTC)n Satellite Satellite 1 214 0 998 62 0 72 chr5 73614902 73615096 -129470436 + (CATTC)n Satellite Satellite 1 180 0 993 129 2 12 chr5 73615112 73615590 -129469942 + (CATTC)n Satellite Satellite 1 473 0 1068 119 2 2 chr5 73615606 73616035 -129469497 + (CATTC)n Satellite Satellite 1 429 0 951 134 0 0 chr5 73616050 73616229 -129469303 + (CATTC)n Satellite Satellite 1 179 0 1035 140 0 10 chr5 73616241 73616546 -129468986 + (CATTC)n Satellite Satellite 2 303 0 1327 70 0 20 chr5 73616565 73616868 -129468664 + (CATTC)n Satellite Satellite 1 296 0 903 134 0 0 chr5 73616884 73617063 -129468469 + (CATTC)n Satellite Satellite 1 179 0 811 111 0 58 chr5 73617079 73617269 -129468263 + (CATTC)n Satellite Satellite 1 179 0 1062 126 0 0 chr5 73617281 73617917 -129467615 + (CATTC)n Satellite Satellite 1 636 0 965 145 8 8 chr5 73617947 73618426 -129467106 + (CATTC)n Satellite Satellite 1 479 0 651 146 0 0 chr5 73618432 73618562 -129466970 + (GAATG)n Satellite Satellite 2 131 0 1331 49 7 7 chr5 73618577 73618992 -129466540 + (GAATG)n Satellite Satellite 1 415 0 1366 84 0 21 chr5 73619008 73619306 -129466226 + (GAATG)n Satellite Satellite 1 291 0 990 101 0 0 chr5 73619317 73619475 -129466057 + (GAATG)n Satellite Satellite 2 159 0 1040 124 3 14 chr5 73619511 73619879 -129465653 + (GAATG)n Satellite Satellite 1 364 0 1191 123 1 14 chr5 73619890 73620644 -129464888 + (GAATG)n Satellite Satellite 1 744 0 1376 39 6 0 chr5 73620892 73621071 -129464461 + (GAATG)n Satellite Satellite 1 180 0 1155 109 4 10 chr5 73621087 73621325 -129464207 + (GAATG)n Satellite Satellite 1 414 0 938 117 6 0 chr5 73621325 73621504 -129464028 + (GAATG)n Satellite Satellite 1 180 0 1119 138 0 3 chr5 73621577 73621931 -129463601 + (GAATG)n Satellite Satellite 1 352 0 1287 83 0 0 chr5 73622006 73622351 -129463181 + (GAATG)n Satellite Satellite 1 345 0 1128 109 0 27 chr5 73622371 73622799 -129462733 + (GAATG)n Satellite Satellite 1 589 0 1172 81 0 5 chr5 73622811 73623025 -129462507 + (GAATG)n Satellite Satellite 1 212 0 1350 104 0 12 chr5 73623051 73623481 -129462051 + (GAATG)n Satellite Satellite 1 602 0 1080 111 0 0 chr5 73623481 73623661 -129461871 + (GAATG)n Satellite Satellite 1 180 0 1334 55 0 6 chr5 73623776 73623957 -129461575 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 1221 126 3 0 chr5 73624183 73624532 -129461000 + (GAATG)n Satellite Satellite 1 350 0 280 141 0 91 chr5 73624607 73624805 -129460727 + (GAATG)n Satellite Satellite 1 180 0 243 164 0 0 chr5 73624905 73624966 -129460566 + (GAATG)n Satellite Satellite 2 62 0 192 40 0 0 chr5 73624997 73625022 -129460510 + (GAATG)n Simple_repeat Simple_repeat 4 28 0 263 95 0 54 chr5 73625307 73625381 -129460151 + (CATTG)n Simple_repeat Simple_repeat 5 74 0 352 119 0 24 chr5 73625402 73625486 -129460046 + (CATGC)n Simple_repeat Simple_repeat 3 84 0 585 28 0 0 chr5 73625519 73625590 -129459942 + (CATTC)n Satellite Satellite 2 72 0 1097 85 5 27 chr5 73625611 73625988 -129459544 + (CATTC)n Satellite Satellite 1 369 0 751 116 0 53 chr5 73626028 73626218 -129459314 + (CATTC)n Satellite Satellite 1 180 0 288 81 40 40 chr5 73626247 73626321 -129459211 + (CATTC)n Satellite Satellite 3 76 0 780 120 5 33 chr5 73626511 73626695 -129458837 + (GAATG)n Satellite Satellite 2 180 0 1127 88 8 21 chr5 73626773 73627324 -129458208 + (GAATG)n Satellite Satellite 1 721 0 1000 87 6 6 chr5 73627348 73627520 -129458012 + (GAATG)n Satellite Satellite 2 173 0 1139 114 1 17 chr5 73627565 73628182 -129457350 + (GAATG)n Satellite Satellite 2 784 0 1256 91 3 14 chr5 73628220 73628745 -129456787 + (GAATG)n Satellite Satellite 1 698 0 1056 106 0 0 chr5 73628766 73628945 -129456587 + (GAATG)n Satellite Satellite 2 180 0 713 167 6 0 chr5 73628960 73629134 -129456398 + (GAATG)n Satellite Satellite 2 176 0 1128 101 0 0 chr5 73629146 73629324 -129456208 + (GAATG)n Satellite Satellite 2 179 0 1227 123 0 0 chr5 73629339 73629674 -129455858 + (GAATG)n Satellite Satellite 1 335 0 1047 134 2 0 chr5 73629689 73630113 -129455419 + (GAATG)n Satellite Satellite 1 425 0 371 126 0 46 chr5 73630125 73630212 -129455320 + (GAATG)n Satellite Satellite 2 84 0 1068 111 0 0 chr5 73630228 73630408 -129455124 + (GAATG)n Satellite Satellite 1 180 0 882 129 0 0 chr5 73630444 73630607 -129454925 + (GAATG)n Satellite Satellite 2 164 0 949 90 0 48 chr5 73630623 73630811 -129454721 + (GAATG)n Satellite Satellite 2 180 0 995 129 7 10 chr5 73630826 73631266 -129454266 + (GAATG)n Satellite Satellite 1 617 0 1084 114 2 19 chr5 73631279 73631924 -129453608 + (GAATG)n Satellite Satellite 1 633 0 379 162 0 40 chr5 73631938 73632086 -129453446 + (GAATG)n Satellite Satellite 3 144 0 247 62 0 42 chr5 73632163 73632211 -129453321 + (GAATG)n Simple_repeat Simple_repeat 2 47 0 192 40 0 0 chr5 73632385 73632410 -129453122 + (TCCA)n Simple_repeat Simple_repeat 1 25 0 250 83 17 50 chr5 73632410 73632470 -129453062 + (CATTC)n Satellite Satellite 4 61 0 678 139 11 22 chr5 73632483 73632663 -129452869 + (CATTC)n Satellite Satellite 2 179 0 771 154 0 0 chr5 73632675 73632844 -129452688 + (CATTC)n Satellite Satellite 2 170 0 944 144 0 11 chr5 73632874 73633328 -129452204 + (CATTC)n Satellite Satellite 1 449 0 1050 136 0 0 chr5 73633340 73633683 -129451849 + (CATTC)n Satellite Satellite 1 343 0 965 89 13 0 chr5 73633723 73633881 -129451651 + (CATTC)n Satellite Satellite 1 160 0 653 145 0 26 chr5 73633909 73634061 -129451471 + (CATTC)n Satellite Satellite 4 151 0 1116 109 2 6 chr5 73634076 73634753 -129450779 + (CATTC)n Satellite Satellite 1 674 0 1277 56 6 0 chr5 73634778 73634957 -129450575 + (CATTC)n Satellite Satellite 1 180 0 1131 89 3 6 chr5 73634972 73635337 -129450195 + (CATTC)n Satellite Satellite 1 363 0 645 131 0 0 chr5 73635349 73635479 -129450053 + (CATTC)n Satellite Satellite 2 131 0 712 137 6 28 chr5 73635494 73635676 -129449856 + (CATTC)n Satellite Satellite 2 179 0 771 154 0 0 chr5 73635688 73635857 -129449675 + (CATTC)n Satellite Satellite 2 170 0 1201 85 6 3 chr5 73635885 73636221 -129449311 + (CATTC)n Satellite Satellite 1 337 0 831 158 3 0 chr5 73636262 73636664 -129448868 + (CATTC)n Satellite Satellite 1 403 0 788 134 0 23 chr5 73636676 73636848 -129448684 + (CATTC)n Satellite Satellite 2 169 0 1066 104 4 4 chr5 73636860 73637103 -129448429 + (CATTC)n Satellite Satellite 1 243 0 1110 108 0 0 chr5 73637115 73637454 -129448078 + (CATTC)n Satellite Satellite 1 339 0 918 138 0 0 chr5 73637480 73637654 -129447878 + (CATTC)n Satellite Satellite 1 174 0 706 152 0 27 chr5 73637666 73637850 -129447682 + (CATTC)n Satellite Satellite 2 180 0 1052 99 0 75 chr5 73637871 73638250 -129447282 + (CATTC)n Satellite Satellite 1 350 0 1094 99 0 6 chr5 73638273 73638454 -129447078 + (CATTC)n Satellite Satellite 1 180 0 1241 99 0 4 chr5 73638480 73638760 -129446772 + (CATTC)n Satellite Satellite 1 278 0 1199 99 0 24 chr5 73638792 73639786 -129445746 + (CATTC)n Satellite Satellite 1 970 0 984 119 0 0 chr5 73639803 73639980 -129445552 + (CATTC)n Satellite Satellite 3 179 0 803 124 0 24 chr5 73639992 73640211 -129445321 + (CATTC)n Satellite Satellite 1 213 0 1056 97 0 0 chr5 73640240 73640455 -129445077 + (CATTC)n Satellite Satellite 1 215 0 1296 67 0 0 chr5 73640475 73640655 -129444877 + (CATTC)n Satellite Satellite 1 180 0 972 143 0 6 chr5 73640666 73641195 -129444337 + (CATTC)n Satellite Satellite 1 526 0 1134 112 3 0 chr5 73641206 73641610 -129443922 + (CATTC)n Satellite Satellite 1 405 0 1233 141 0 2 chr5 73641625 73642109 -129443423 + (CATTC)n Satellite Satellite 1 482 0 1224 100 3 27 chr5 73642139 73642508 -129443024 + (CATTC)n Satellite Satellite 1 360 0 398 43 0 71 chr5 73642534 73642604 -129442928 + (CATTC)n Satellite Satellite 2 66 0 1099 89 6 6 chr5 73642623 73642803 -129442729 + (CATTC)n Satellite Satellite 1 180 0 884 146 6 0 chr5 73642824 73643160 -129442372 + (CATTC)n Satellite Satellite 1 338 0 841 110 6 23 chr5 73643172 73643345 -129442187 + (CATTC)n Satellite Satellite 2 171 0 927 91 3 50 chr5 73643359 73643691 -129441841 + (CATTC)n Satellite Satellite 2 317 0 1161 95 0 22 chr5 73643711 73644711 -129440821 + (CATTC)n Satellite Satellite 1 978 0 1034 83 0 5 chr5 73644724 73644938 -129440594 + (CATTC)n Satellite Satellite 1 212 0 839 114 0 24 chr5 73644949 73645116 -129440416 + (CATTC)n Satellite Satellite 2 164 0 1406 89 3 18 chr5 73645128 73646324 -129439208 + (CATTC)n Satellite Satellite 1 1177 0 1064 131 3 3 chr5 73646336 73646665 -129438867 + (CATTC)n Satellite Satellite 2 330 0 1186 100 2 29 chr5 73646677 73647245 -129438287 + (CATTC)n Satellite Satellite 1 552 0 1017 128 0 0 chr5 73647261 73647441 -129438091 + (CATTC)n Satellite Satellite 1 180 0 1247 105 0 14 chr5 73647453 73647813 -129437719 + (CATTC)n Satellite Satellite 3 356 0 512 148 8 0 chr5 73647830 73647952 -129437580 + (CATTC)n Satellite Satellite 2 124 0 1284 67 0 0 chr5 73647968 73648148 -129437384 + (CATTC)n Satellite Satellite 1 180 0 1102 86 2 40 chr5 73648159 73648578 -129436954 + (CATTC)n Satellite Satellite 1 403 0 745 132 6 28 chr5 73648593 73648775 -129436757 + (CATTC)n Satellite Satellite 2 179 0 862 143 0 29 chr5 73648787 73649090 -129436442 + (CATTC)n Satellite Satellite 1 294 0 1189 73 6 6 chr5 73649111 73649290 -129436242 + (CATTC)n Satellite Satellite 2 180 0 1140 135 2 10 chr5 73649336 73649818 -129435714 + (CATTC)n Satellite Satellite 1 477 0 1280 59 3 56 chr5 73649844 73650213 -129435319 + (CATTC)n Satellite Satellite 1 349 0 1068 118 0 0 chr5 73650233 73650472 -129435060 + (CATTC)n Satellite Satellite 1 239 0 865 115 6 27 chr5 73650489 73650672 -129434860 + (CATTC)n Satellite Satellite 2 180 0 1059 112 0 0 chr5 73650683 73650862 -129434670 + (CATTC)n Satellite Satellite 2 180 0 891 154 0 18 chr5 73650873 73651196 -129434336 + (CATTC)n Satellite Satellite 2 318 0 906 134 0 18 chr5 73651207 73651711 -129433821 + (CATTC)n Satellite Satellite 1 495 0 636 138 0 0 chr5 73651722 73651852 -129433680 + (CATTC)n Satellite Satellite 2 131 0 998 112 6 0 chr5 73651882 73652060 -129433472 + (CATTC)n Satellite Satellite 2 180 0 1056 111 0 0 chr5 73652080 73652260 -129433272 + (CATTC)n Satellite Satellite 1 180 0 1132 75 6 6 chr5 73652271 73652445 -129433087 + (CATTC)n Satellite Satellite 2 175 0 692 169 6 0 chr5 73652486 73652664 -129432868 + (CATTC)n Satellite Satellite 2 180 0 819 147 0 0 chr5 73652680 73652843 -129432689 + (CATTC)n Satellite Satellite 2 164 0 680 148 5 0 chr5 73652855 73653072 -129432460 + (CATTC)n Satellite Satellite 1 218 0 797 159 11 0 chr5 73653084 73653260 -129432272 + (CATTC)n Satellite Satellite 2 179 0 977 121 3 26 chr5 73653272 73653617 -129431915 + (CATTC)n Satellite Satellite 2 338 0 984 143 3 13 chr5 73653632 73654259 -129431273 + (CATTC)n Satellite Satellite 1 621 0 1089 127 0 3 chr5 73654274 73654629 -129430903 + (CATTC)n Satellite Satellite 1 354 0 1166 81 0 20 chr5 73654663 73654958 -129430574 + (GAATG)n Satellite Satellite 1 289 0 279 54 0 0 chr5 73654975 73655012 -129430520 + (GAATG)n Satellite Satellite 3 39 0 298 53 0 84 chr5 73655072 73655167 -129430365 + (GAATG)n Satellite Satellite 3 89 0 1142 44 0 32 chr5 73655185 73655451 -129430081 + (GAATG)n Satellite Satellite 1 257 0 237 33 0 0 chr5 73655464 73655494 -129430038 + (GAATG)n Satellite Satellite 5 34 0 1096 83 0 11 chr5 73655525 73655706 -129429826 + (GAATG)n Satellite Satellite 2 180 0 718 123 0 26 chr5 73655721 73655876 -129429656 + (GAATG)n Satellite Satellite 1 151 0 207 69 0 0 chr5 73655947 73655976 -129429556 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 711 169 0 0 chr5 73656086 73656263 -129429269 + (GAATG)n Satellite Satellite 2 178 0 848 130 0 27 chr5 73656279 73656464 -129429068 + (GAATG)n Satellite Satellite 1 180 0 840 151 0 0 chr5 73656480 73656659 -129428873 + (GAATG)n Satellite Satellite 1 179 0 993 135 1 1 chr5 73656675 73657402 -129428130 + (GAATG)n Satellite Satellite 2 891 0 981 58 5 58 chr5 73657423 73657612 -129427920 + (GAATG)n Satellite Satellite 2 180 0 242 28 0 28 chr5 73657628 73657664 -129427868 + (GAATG)n Satellite Satellite 2 36 0 983 111 0 6 chr5 73657689 73657869 -129427663 + (GAATG)n Satellite Satellite 1 179 0 1023 69 5 28 chr5 73657885 73658108 -129427424 + (GAATG)n Satellite Satellite 1 217 0 1293 100 0 14 chr5 73658124 73658488 -129427044 + (GAATG)n Satellite Satellite 1 534 0 1260 79 0 0 chr5 73658500 73658678 -129426854 + (GAATG)n Satellite Satellite 2 179 0 969 142 0 2 chr5 73658692 73658967 -129426565 + (GAATG)n Satellite Satellite 1 454 0 1054 89 6 6 chr5 73658979 73659158 -129426374 + (GAATG)n Satellite Satellite 1 179 0 273 105 0 40 chr5 73659186 73659262 -129426270 + (GAATG)n Satellite Satellite 2 74 0 1085 37 0 58 chr5 73659286 73659477 -129426055 + (GAATG)n Satellite Satellite 1 180 0 813 144 0 0 chr5 73659565 73659725 -129425807 + (GAATG)n Satellite Satellite 3 162 0 567 117 0 0 chr5 73659747 73659850 -129425682 + (GAATG)n Satellite Satellite 3 105 0 1122 130 0 1 chr5 73659863 73660501 -129425031 + (GAATG)n Satellite Satellite 1 816 0 1089 132 3 1 chr5 73660517 73661038 -129424494 + (GAATG)n Satellite Satellite 1 702 0 1176 106 0 17 chr5 73661054 73661619 -129423913 + (GAATG)n Satellite Satellite 1 555 0 865 113 12 0 chr5 73661648 73661816 -129423716 + (GAATG)n Satellite Satellite 2 171 0 1019 106 0 6 chr5 73661833 73662012 -129423520 + (GAATG)n Satellite Satellite 2 179 0 934 107 11 0 chr5 73662037 73662214 -129423318 + (GAATG)n Satellite Satellite 2 180 0 680 116 18 24 chr5 73662227 73662391 -129423141 + (GAATG)n Satellite Satellite 4 166 0 986 127 6 26 chr5 73662611 73662917 -129422615 + (CATTC)n Satellite Satellite 3 301 0 1378 63 3 30 chr5 73663052 73663414 -129422118 + (CATTC)n Satellite Satellite 2 353 0 247 132 0 79 chr5 73663416 73663492 -129422040 + (TTCCG)n Simple_repeat Simple_repeat 2 71 0 1374 114 1 9 chr5 73663511 73665212 -129420320 + (CATTC)n Satellite Satellite 1 1687 0 1377 61 0 0 chr5 73665223 73665403 -129420129 + (CATTC)n Satellite Satellite 1 180 0 969 123 0 0 chr5 73665429 73665608 -129419924 + (CATTC)n Satellite Satellite 2 180 0 1253 56 0 6 chr5 73665619 73665799 -129419733 + (CATTC)n Satellite Satellite 2 180 0 1035 144 0 3 chr5 73665820 73666179 -129419353 + (CATTC)n Satellite Satellite 2 359 0 1218 85 0 0 chr5 73666201 73666378 -129419154 + (CATTC)n Satellite Satellite 3 179 0 1452 105 5 30 chr5 73666390 73667527 -129418005 + (CATTC)n Satellite Satellite 1 1109 0 1134 122 2 29 chr5 73667543 73667915 -129417617 + (CATTC)n Satellite Satellite 1 362 0 1194 134 1 22 chr5 73667941 73668784 -129416748 + (CATTC)n Satellite Satellite 1 824 0 1266 111 0 22 chr5 73668813 73669362 -129416170 + (CATTC)n Satellite Satellite 4 350 0 882 83 6 30 chr5 73669389 73669558 -129415974 + (CATTC)n Satellite Satellite 3 167 0 967 125 0 17 chr5 73669581 73669947 -129415585 + (CATTC)n Satellite Satellite 1 359 0 1056 106 0 0 chr5 73669961 73670140 -129415392 + (CATTC)n Satellite Satellite 2 180 0 339 25 0 0 chr5 73670161 73670201 -129415331 + (CATTC)n Satellite Satellite 2 41 0 1118 80 0 59 chr5 73670224 73670804 -129414728 + (CATTC)n Satellite Satellite 1 545 0 1104 92 0 0 chr5 73670835 73670998 -129414534 + (CATTC)n Satellite Satellite 2 164 0 990 110 0 0 chr5 73671010 73671183 -129414349 + (CATTC)n Satellite Satellite 2 174 0 1226 87 0 24 chr5 73671209 73671575 -129413957 + (CATTC)n Satellite Satellite 1 358 0 1287 110 0 12 chr5 73671606 73672010 -129413522 + (CATTC)n Satellite Satellite 1 399 0 1113 131 2 8 chr5 73672025 73673044 -129412488 + (CATTC)n Satellite Satellite 1 1013 0 907 117 12 0 chr5 73673072 73673243 -129412289 + (CATTC)n Satellite Satellite 4 176 0 994 127 2 15 chr5 73673457 73673985 -129411547 + (CATTC)n Satellite Satellite 1 520 0 1557 72 1 0 chr5 73674023 73674729 -129410803 + (CATTC)n Satellite Satellite 1 707 0 903 142 0 29 chr5 73674747 73675112 -129410420 + (CATTC)n Satellite Satellite 2 355 0 1292 109 0 3 chr5 73675126 73675477 -129410055 + (CATTC)n Satellite Satellite 1 349 0 951 123 0 0 chr5 73675492 73675655 -129409877 + (CATTC)n Satellite Satellite 2 164 0 694 140 6 6 chr5 73675669 73675826 -129409706 + (CATTC)n Satellite Satellite 4 160 0 1125 121 4 11 chr5 73675842 73676384 -129409148 + (CATTC)n Satellite Satellite 1 538 0 949 90 0 48 chr5 73676400 73676588 -129408944 + (CATTC)n Satellite Satellite 2 180 0 1175 126 2 24 chr5 73676604 73677059 -129408473 + (CATTC)n Satellite Satellite 1 445 0 1362 96 0 11 chr5 73677071 73677433 -129408099 + (CATTC)n Satellite Satellite 2 359 0 210 128 0 0 chr5 73677444 73677483 -129408049 + (CATTC)n Satellite Satellite 2 40 0 1146 90 0 0 chr5 73677498 73677676 -129407856 + (CATTC)n Satellite Satellite 1 178 0 1466 63 4 12 chr5 73677687 73678203 -129407329 + (CATTC)n Satellite Satellite 1 512 0 1442 33 0 16 chr5 73678215 73678722 -129406810 + (CATTC)n Satellite Satellite 1 498 0 1090 94 6 6 chr5 73678747 73678927 -129406605 + (CATTC)n Satellite Satellite 1 180 0 1491 40 0 7 chr5 73678943 73679394 -129406138 + (CATTC)n Satellite Satellite 1 448 0 714 125 12 40 chr5 73679410 73679743 -129405789 + (CATTC)n Satellite Satellite 1 323 0 239 53 0 26 chr5 73679800 73679838 -129405694 + (CATTC)n Satellite Satellite 3 39 0 680 107 6 36 chr5 73679851 73680019 -129405513 + (CATTC)n Satellite Satellite 2 164 0 918 72 0 77 chr5 73680036 73680231 -129405301 + (CATTC)n Satellite Satellite 1 180 0 979 144 5 3 chr5 73680247 73680869 -129404663 + (CATTC)n Satellite Satellite 1 623 0 1113 106 0 0 chr5 73680884 73681064 -129404468 + (CATTC)n Satellite Satellite 1 180 0 836 146 6 0 chr5 73681089 73681267 -129404265 + (CATTC)n Satellite Satellite 1 179 0 755 151 0 22 chr5 73681279 73681458 -129404074 + (CATTC)n Satellite Satellite 2 176 0 1080 106 0 0 chr5 73681473 73681652 -129403880 + (CATTC)n Satellite Satellite 2 180 0 1044 106 0 0 chr5 73681668 73681847 -129403685 + (CATTC)n Satellite Satellite 1 179 0 452 40 0 66 chr5 73681861 73681937 -129403595 + (CATTC)n Satellite Satellite 4 74 0 1104 92 0 0 chr5 73681959 73682122 -129403410 + (CATTC)n Satellite Satellite 2 164 0 707 105 0 35 chr5 73682134 73682277 -129403255 + (CATTC)n Satellite Satellite 2 139 0 1037 137 0 3 chr5 73682293 73682657 -129402875 + (CATTC)n Satellite Satellite 1 362 0 912 124 3 3 chr5 73682688 73683092 -129402440 + (CATTC)n Satellite Satellite 1 404 0 1413 70 0 0 chr5 73683104 73683463 -129402069 + (CATTC)n Satellite Satellite 1 359 0 1086 100 0 0 chr5 73683478 73683658 -129401874 + (CATTC)n Satellite Satellite 1 180 0 787 142 0 27 chr5 73683679 73683862 -129401670 + (CATTC)n Satellite Satellite 2 179 0 1035 116 3 39 chr5 73683874 73684243 -129401289 + (CATTC)n Satellite Satellite 2 356 0 1167 126 3 6 chr5 73684267 73684614 -129400918 + (CATTC)n Satellite Satellite 2 347 0 930 138 0 0 chr5 73684643 73684817 -129400715 + (CATTC)n Satellite Satellite 1 174 0 1359 111 0 8 chr5 73684829 73685336 -129400196 + (CATTC)n Satellite Satellite 1 503 0 883 119 4 40 chr5 73685352 73685642 -129399890 + (CATTC)n Satellite Satellite 1 279 0 819 149 0 0 chr5 73685654 73685822 -129399710 + (CATTC)n Satellite Satellite 2 169 0 423 100 0 0 chr5 73685834 73685904 -129399628 + (CATTC)n Satellite Satellite 2 71 0 922 95 0 53 chr5 73685923 73686113 -129399419 + (CATTC)n Satellite Satellite 1 180 0 1113 96 0 0 chr5 73686129 73686307 -129399225 + (CATTC)n Satellite Satellite 2 179 0 958 129 5 12 chr5 73686329 73686739 -129398793 + (CATTC)n Satellite Satellite 1 407 0 1557 70 0 0 chr5 73686751 73687120 -129398412 + (CATTC)n Satellite Satellite 1 369 0 1167 137 4 13 chr5 73687137 73687830 -129397702 + (CATTC)n Satellite Satellite 1 687 0 918 140 0 0 chr5 73687856 73688035 -129397497 + (CATTC)n Satellite Satellite 1 179 0 892 145 3 3 chr5 73688047 73688351 -129397181 + (CATTC)n Satellite Satellite 1 304 0 1109 98 4 4 chr5 73688407 73688931 -129396601 + (CATTC)n Satellite Satellite 1 524 0 297 0 0 0 chr5 73688957 73688990 -129396542 + (CATTC)n Satellite Satellite 2 34 0 324 133 0 0 chr5 73689054 73689114 -129396418 + (CATTC)n Satellite Satellite 3 62 0 882 90 11 53 chr5 73689157 73689345 -129396187 + (CATTC)n Satellite Satellite 1 180 0 335 98 5 104 chr5 73689495 73689688 -129395844 + (GAATG)n Satellite Satellite 4 177 0 897 88 0 46 chr5 73689726 73689950 -129395582 + (GAATG)n Satellite Satellite 1 213 0 1338 111 2 0 chr5 73689961 73690505 -129395027 + (GAATG)n Satellite Satellite 1 545 0 1181 93 6 3 chr5 73690524 73691037 -129394495 + (GAATG)n Satellite Satellite 1 694 0 390 159 0 0 chr5 73691049 73691137 -129394395 + (GAATG)n Satellite Satellite 2 89 0 1061 93 5 24 chr5 73691149 73691525 -129394007 + (GAATG)n Satellite Satellite 1 369 0 384 176 23 0 chr5 73691549 73691680 -129393852 + (GAATG)n Satellite Satellite 3 136 0 1437 72 0 28 chr5 73691691 73692176 -129393356 + (GAATG)n Satellite Satellite 1 643 0 1060 85 0 11 chr5 73692176 73692353 -129393179 + (GAATG)n Satellite Satellite 2 176 0 924 131 0 0 chr5 73692564 73692739 -129392793 + (GAATG)n Satellite Satellite 5 179 0 1337 70 6 8 chr5 73692754 73693042 -129392490 + (GAATG)n Satellite Satellite 2 465 0 1135 102 5 26 chr5 73693057 73693660 -129391872 + (GAATG)n Satellite Satellite 3 763 0 1402 85 3 6 chr5 73693681 73693750 -129391782 + (GAATG)n Satellite Satellite 1 416 0 1402 64 3 3 chr5 73693750 73694099 -129391433 + (GAATG)n Satellite Satellite 1 349 0 1251 94 0 29 chr5 73694215 73694778 -129390754 + (GAATG)n Satellite Satellite 2 716 0 227 30 0 30 chr5 73694791 73694824 -129390708 + (GAATG)n Satellite Satellite 3 34 0 231 36 0 0 chr5 73694836 73694864 -129390668 + (GAATG)n Satellite Satellite 3 30 0 923 108 0 6 chr5 73694900 73695066 -129390466 + (GAATG)n Satellite Satellite 2 166 0 1057 112 4 4 chr5 73695078 73695321 -129390211 + (GAATG)n Satellite Satellite 1 243 0 752 130 0 25 chr5 73695333 73695495 -129390037 + (GAATG)n Satellite Satellite 2 159 0 939 129 0 0 chr5 73695507 73695685 -129389847 + (GAATG)n Satellite Satellite 2 179 0 1072 71 0 12 chr5 73695696 73695866 -129389666 + (GAATG)n Satellite Satellite 2 169 0 963 141 3 3 chr5 73695878 73696232 -129389300 + (GAATG)n Satellite Satellite 1 354 0 1299 112 0 0 chr5 73696269 73696619 -129388913 + (GAATG)n Satellite Satellite 1 350 0 272 76 0 91 chr5 73696634 73696700 -129388832 + (GAATG)n Satellite Satellite 2 61 0 1264 51 6 6 chr5 73696712 73696890 -129388642 + (GAATG)n Satellite Satellite 2 179 0 1031 111 0 6 chr5 73696902 73697082 -129388450 + (GAATG)n Satellite Satellite 1 179 0 769 116 0 53 chr5 73697102 73697291 -129388241 + (GAATG)n Satellite Satellite 2 180 0 735 165 0 0 chr5 73697323 73697499 -129388033 + (GAATG)n Satellite Satellite 4 179 0 1085 106 1 19 chr5 73697542 73698175 -129387357 + (GAATG)n Satellite Satellite 1 799 0 480 110 7 71 chr5 73698187 73698341 -129387191 + (GAATG)n Satellite Satellite 1 144 0 214 63 0 95 chr5 73698366 73698429 -129387103 + (GAATG)n Satellite Satellite 4 60 0 955 89 0 28 chr5 73698444 73698624 -129386908 + (GAATG)n Satellite Satellite 3 177 0 198 128 0 0 chr5 73698643 73698682 -129386850 + (GAATG)n Satellite Satellite 2 40 0 1359 57 2 2 chr5 73698693 73699017 -129386515 + (GAATG)n Satellite Satellite 1 505 0 1398 88 0 0 chr5 73699028 73699382 -129386150 + (GAATG)n Satellite Satellite 1 354 0 917 127 0 6 chr5 73699423 73699604 -129385928 + (GAATG)n Satellite Satellite 1 180 0 827 126 0 27 chr5 73699620 73699803 -129385729 + (GAATG)n Satellite Satellite 2 179 0 1176 95 2 19 chr5 73699824 73700192 -129385340 + (GAATG)n Satellite Satellite 1 538 0 480 100 0 0 chr5 73700207 73700287 -129385245 + (GAATG)n Satellite Satellite 2 81 0 1096 94 4 11 chr5 73700303 73700665 -129384867 + (GAATG)n Satellite Satellite 1 538 0 1169 98 3 28 chr5 73700679 73701254 -129384278 + (GAATG)n Satellite Satellite 1 735 0 1169 78 0 6 chr5 73701254 73701434 -129384098 + (GAATG)n Satellite Satellite 1 179 0 1203 118 0 0 chr5 73701480 73702003 -129383529 + (GAATG)n Satellite Satellite 1 523 0 1077 79 6 17 chr5 73702319 73702496 -129383036 + (GAATG)n Satellite Satellite 2 176 0 673 131 29 8 chr5 73702527 73702778 -129382754 + (GAATG)n Satellite Satellite 1 256 0 1566 87 4 22 chr5 73702798 73703035 -129382497 + (GAATG)n Satellite Satellite 1 409 0 1566 11 0 0 chr5 73703035 73703215 -129382317 + (GAATG)n Satellite Satellite 1 180 0 1002 98 0 42 chr5 73703723 73704033 -129381499 + (CATTC)n Satellite Satellite 5 297 0 999 109 0 0 chr5 73704047 73704212 -129381320 + (CATTC)n Satellite Satellite 2 166 0 775 109 0 48 chr5 73704227 73704479 -129381053 + (CATTC)n Satellite Satellite 1 239 0 1149 70 0 24 chr5 73704500 73704738 -129380794 + (CATTC)n Satellite Satellite 1 232 0 1146 93 0 32 chr5 73704751 73705114 -129380418 + (CATTC)n Satellite Satellite 4 352 0 916 132 3 5 chr5 73705129 73705743 -129379789 + (CATTC)n Satellite Satellite 1 612 0 1083 137 3 0 chr5 73705755 73706106 -129379426 + (CATTC)n Satellite Satellite 1 352 0 876 144 0 0 chr5 73706118 73706291 -129379241 + (CATTC)n Satellite Satellite 2 174 0 888 131 0 0 chr5 73706303 73706690 -129378842 + (CATTC)n Satellite Satellite 1 387 0 850 112 6 6 chr5 73706724 73706885 -129378647 + (CATTC)n Satellite Satellite 4 164 0 590 127 4 45 chr5 73706902 73707183 -129378349 + (CATTC)n Satellite Satellite 1 269 0 1155 123 0 4 chr5 73707199 73708003 -129377529 + (CATTC)n Satellite Satellite 1 801 0 1056 144 0 7 chr5 73708018 73708566 -129376966 + (CATTC)n Satellite Satellite 1 543 0 667 105 5 68 chr5 73708589 73708780 -129376752 + (CATTC)n Satellite Satellite 2 180 0 192 184 0 0 chr5 73708791 73708840 -129376692 + (CATTC)n Satellite Satellite 2 50 0 1056 129 0 11 chr5 73708855 73709224 -129376308 + (CATTC)n Satellite Satellite 1 364 0 1068 115 3 5 chr5 73709250 73709638 -129375894 + (CATTC)n Satellite Satellite 1 386 0 1064 92 0 6 chr5 73709660 73709824 -129375708 + (CATTC)n Satellite Satellite 2 164 0 1392 111 0 9 chr5 73709836 73711085 -129374447 + (CATTC)n Satellite Satellite 1 1238 0 1056 134 0 0 chr5 73711096 73711455 -129374077 + (CATTC)n Satellite Satellite 1 359 0 1104 134 2 17 chr5 73711466 73711555 -129373977 + (CATTC)n Satellite Satellite 1 90 -470 263 96 19 0 chr5 73711555 73711607 -129373925 + (CATTG)n Simple_repeat Simple_repeat 3 55 0 1104 134 2 17 chr5 73711607 73712035 -129373497 + (CATTC)n Satellite Satellite 90 560 0 210 128 0 0 chr5 73712052 73712091 -129373441 + (CATTC)n Satellite Satellite 2 40 0 1010 117 6 0 chr5 73712105 73712284 -129373248 + (CATTC)n Satellite Satellite 1 180 0 687 159 3 0 chr5 73712297 73712599 -129372933 + (CATTC)n Satellite Satellite 1 303 0 1089 106 0 0 chr5 73712617 73712797 -129372735 + (CATTC)n Satellite Satellite 1 180 0 1044 128 2 2 chr5 73712813 73713282 -129372250 + (CATTC)n Satellite Satellite 1 469 0 1204 87 0 36 chr5 73713299 73713744 -129371788 + (CATTC)n Satellite Satellite 1 429 0 932 78 0 53 chr5 73713762 73714006 -129371526 + (CATTC)n Satellite Satellite 1 231 0 1164 68 0 43 chr5 73714021 73714394 -129371138 + (CATTC)n Satellite Satellite 2 357 0 953 118 6 0 chr5 73714410 73714588 -129370944 + (CATTC)n Satellite Satellite 2 180 0 1152 148 3 3 chr5 73714604 73715183 -129370349 + (CATTC)n Satellite Satellite 1 579 0 1038 112 0 3 chr5 73715207 73715537 -129369995 + (CATTC)n Satellite Satellite 1 328 0 1083 110 4 18 chr5 73715548 73716269 -129369263 + (CATTC)n Satellite Satellite 1 710 0 945 126 0 0 chr5 73716286 73716461 -129369071 + (CATTC)n Satellite Satellite 5 179 0 755 151 0 22 chr5 73716473 73716652 -129368880 + (CATTC)n Satellite Satellite 2 176 0 1026 110 0 0 chr5 73716667 73716840 -129368692 + (CATTC)n Satellite Satellite 2 174 0 860 117 0 35 chr5 73716854 73717136 -129368396 + (CATTC)n Satellite Satellite 1 271 0 1080 111 0 0 chr5 73717166 73717346 -129368186 + (CATTC)n Satellite Satellite 1 180 0 886 95 0 53 chr5 73717371 73717561 -129367971 + (CATTC)n Satellite Satellite 1 180 0 1044 111 0 0 chr5 73717591 73717771 -129367761 + (CATTC)n Satellite Satellite 1 180 0 1146 136 0 9 chr5 73717782 73718119 -129367413 + (CATTC)n Satellite Satellite 2 335 0 756 99 0 73 chr5 73718145 73718382 -129367150 + (CATTC)n Satellite Satellite 1 219 0 1050 101 3 17 chr5 73718396 73718650 -129366882 + (CATTC)n Satellite Satellite 1 250 0 1209 78 0 0 chr5 73718665 73718844 -129366688 + (CATTC)n Satellite Satellite 2 180 0 1068 71 0 0 chr5 73718855 73719010 -129366522 + (CATTC)n Satellite Satellite 2 156 0 972 117 0 0 chr5 73719062 73719225 -129366307 + (CATTC)n Satellite Satellite 2 164 0 1149 96 4 12 chr5 73719240 73720066 -129365466 + (CATTC)n Satellite Satellite 1 818 0 1137 121 3 14 chr5 73720112 73720479 -129365053 + (CATTC)n Satellite Satellite 1 362 0 1103 112 3 20 chr5 73720493 73721205 -129364327 + (CATTC)n Satellite Satellite 4 349 0 1124 71 0 6 chr5 73721219 73721388 -129364144 + (CATTC)n Satellite Satellite 2 169 0 1142 85 6 0 chr5 73721400 73721577 -129363955 + (CATTC)n Satellite Satellite 2 179 0 1053 134 0 10 chr5 73721589 73721887 -129363645 + (CATTC)n Satellite Satellite 2 296 0 864 65 0 100 chr5 73721898 73722098 -129363434 + (CATTC)n Satellite Satellite 1 180 0 963 125 0 0 chr5 73722114 73722337 -129363195 + (CATTC)n Satellite Satellite 1 223 0 1160 107 0 31 chr5 73722349 73723248 -129362284 + (CATTC)n Satellite Satellite 1 871 0 194 105 26 0 chr5 73723267 73723305 -129362227 + (CATTC)n Satellite Satellite 1 39 0 249 263 131 102 chr5 73823366 73823602 -129261930 + L2 LINE L2 3025 3267 -5 331 206 49 20 chr5 73824163 73824265 -129261267 + CT-rich Low_complexity Low_complexity 3 107 0 572 216 94 69 chr5 73824370 73824442 -129261090 - MER112 DNA MER1_type -9 251 182 2086 76 8 4 chr5 73824442 73824705 -129260827 - AluSq SINE Alu -49 264 1 572 216 94 69 chr5 73824705 73824877 -129260655 - MER112 DNA MER1_type -78 182 1 1156 147 84 5 chr5 73825552 73825742 -129259790 + MER3 DNA MER1_type 5 209 0 1896 228 137 6 chr5 73827800 73828295 -129257237 - MLT1F1 LTR MaLR -6 561 2 206 360 101 0 chr5 73828676 73828765 -129256767 + L3 LINE CR1 1344 1441 -136 940 290 37 29 chr5 73828871 73829219 -129256313 - MLT1I LTR MaLR -58 351 1 576 266 49 22 chr5 73829219 73829403 -129256129 - L2 LINE L2 -31 3282 3094 601 232 29 14 chr5 73831625 73831763 -129253769 + MIR SINE MIR 88 227 -35 587 304 88 24 chr5 73831815 73832065 -129253467 + L2 LINE L2 2881 3146 -167 923 163 70 6 chr5 73832154 73832344 -129253188 - MER58B DNA MER1_type 0 341 1 23 33 0 0 chr5 73833179 73833209 -129252323 + AT_rich Low_complexity Low_complexity 1 30 0 437 346 95 0 chr5 73833751 73833962 -129251570 + L2 LINE L2 2907 3137 -176 23 33 0 0 chr5 73834576 73834606 -129250926 + AT_rich Low_complexity Low_complexity 1 30 0 245 317 19 19 chr5 73834765 73834869 -129250663 + CT-rich Low_complexity Low_complexity 3 106 0 2521 132 72 10 chr5 73835218 73835621 -129249911 - MSTA LTR MaLR 0 428 1 251 289 181 0 chr5 73835781 73835930 -129249602 - MIR SINE MIR -18 244 69 204 392 62 10 chr5 73836522 73836619 -129248913 + L2 LINE L2 3151 3252 -20 467 281 53 29 chr5 73836751 73836922 -129248610 + MIR3 SINE MIR 34 208 0 390 42 0 0 chr5 73837858 73837906 -129247626 + (TG)n Simple_repeat Simple_repeat 2 49 0 694 225 136 6 chr5 73838485 73838654 -129246878 - MER20 DNA MER1_type 0 219 29 396 250 29 59 chr5 73838925 73839061 -129246471 + L2 LINE L2 3182 3313 0 947 137 6 0 chr5 73839155 73839330 -129246202 + (TCCC)n Simple_repeat Simple_repeat 3 178 0 2288 113 0 3 chr5 73839336 73839646 -129245886 - AluSc SINE Alu 0 309 1 537 301 60 11 chr5 73840480 73840663 -129244869 - MIR SINE MIR -4 258 67 31654 43 34 4 chr5 73841142 73845079 -129240453 + L1P LINE L1 1 4057 -2089 24 53 0 0 chr5 73845342 73845380 -129240152 + AT_rich Low_complexity Low_complexity 1 38 0 883 270 137 32 chr5 73845451 73846157 -129239375 - L2 LINE L2 0 3313 2423 890 156 73 19 chr5 73846527 73846732 -129238800 - L1MA8 LINE L1 0 6291 6076 268 249 232 76 chr5 73848475 73848660 -129236872 + L1MC4 LINE L1 7803 8016 -26 33 43 0 0 chr5 73849250 73849297 -129236235 + AT_rich Low_complexity Low_complexity 1 47 0 866 233 0 0 chr5 73849297 73849460 -129236072 - FRAM SINE Alu -3 163 1 762 211 108 14 chr5 73850161 73850374 -129235158 + MER112 DNA MER1_type 22 254 -6 866 220 38 90 chr5 73850924 73850959 -129234573 - L1ME2 LINE L1 -11 6153 6118 2123 85 21 18 chr5 73850959 73851284 -129234248 - AluSc SINE Alu 0 326 1 866 220 38 90 chr5 73851284 73851592 -129233940 - L1ME2 LINE L1 -46 6118 5827 * 1035 240 26 32 chr5 73851591 73851609 -129233923 - L1ME2 LINE L1 -554 5610 5593 1492 107 30 4 chr5 73851609 73851842 -129233690 + L1MA5A LINE L1 6058 6296 -1 1035 240 26 32 chr5 73851842 73852131 -129233401 - L1ME2 LINE L1 -571 5593 5305 909 235 67 39 chr5 73853806 73854061 -129231471 - MIR SINE MIR 0 262 1 454 307 53 13 chr5 73854224 73854524 -129231008 + L1ME4a LINE L1 5570 5881 -240 329 167 0 0 chr5 73854598 73854652 -129230880 + Tigger5 DNA MER2_type 1 54 -2269 * 525 162 57 19 chr5 73854645 73854750 -129230782 + Tigger5 DNA MER2_type 2215 2323 0 225 233 233 31 chr5 73854931 73855060 -129230472 - MLT1I LTR MaLR 0 409 255 650 213 0 0 chr5 73855324 73855432 -129230100 + Tigger3(Golem) DNA MER2_type 1 108 -2921 4130 114 87 12 chr5 73855434 73856125 -129229407 + Tigger3(Golem) DNA MER2_type 2287 3029 0 1096 186 147 32 chr5 73856131 73856416 -129229116 + MER2 DNA MER2_type 1 318 -27 23 54 0 0 chr5 73856489 73856526 -129229006 + AT_rich Low_complexity Low_complexity 1 37 0 351 261 75 22 chr5 73856529 73856663 -129228869 - L1ME4a LINE L1 -5 6116 5976 846 289 90 28 chr5 73857702 73858039 -129227493 - MLT1J2 LTR MaLR -7 443 81 423 0 0 0 chr5 73858039 73858086 -129227446 + (TG)n Simple_repeat Simple_repeat 1 47 0 846 289 90 28 chr5 73858086 73858105 -129227427 - MLT1J2 LTR MaLR -369 81 65 242 273 32 104 chr5 73858128 73858282 -129227250 - L2 LINE L2 -878 2436 2294 3275 76 0 57 chr5 73858440 73858898 -129226634 - MLT2A1 LTR ERVL -12 432 1 589 290 108 85 chr5 73858899 73859293 -129226239 - L2 LINE L2 -1441 1873 1456 2717 127 54 7 chr5 73859293 73859734 -129225798 + L1MD1 LINE L1 5781 6242 0 589 290 108 85 chr5 73859734 73860007 -129225525 - L2 LINE L2 -1858 1456 1191 1541 172 110 49 chr5 73860308 73860634 -129224898 - MER7A DNA MER2_type -1 345 2 2363 93 0 6 chr5 73862043 73862355 -129223177 - AluY SINE Alu -1 310 1 397 293 187 0 chr5 73863564 73863714 -129221818 + MIR3 SINE MIR 6 183 -25 1082 195 111 60 chr5 73864411 73864744 -129220788 + MLT1A1 LTR MaLR 16 365 0 586 172 172 6 chr5 73865576 73865733 -129219799 - MER53 DNA DNA -1 188 6 405 0 0 0 chr5 73865867 73865912 -129219620 + (TG)n Simple_repeat Simple_repeat 2 46 0 232 309 103 37 chr5 73866315 73866451 -129219081 + MIR3 SINE MIR 8 152 -56 320 359 35 21 chr5 73867919 73868061 -129217471 - MIR SINE MIR -105 157 14 338 287 96 38 chr5 73868255 73868412 -129217120 - MIR SINE MIR -77 185 20 207 0 0 0 chr5 73870259 73870282 -129215250 + (T)n Simple_repeat Simple_repeat 1 23 0 1388 137 75 16 chr5 73870929 73871184 -129214348 - L1MB3 LINE L1 -8 6175 5906 2229 73 140 240 chr5 73871184 73871826 -129213706 - LTR12 LTR ERV1 -136 578 1 1399 169 92 0 chr5 73871826 73872087 -129213445 - L1MB3 LINE L1 -271 5912 5628 2289 104 0 10 chr5 73872869 73873176 -129212356 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr5 73875145 73875173 -129210359 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 73875369 73875392 -129210140 + AT_rich Low_complexity Low_complexity 1 23 0 279 301 105 65 chr5 73875632 73875801 -129209731 - MIR SINE MIR -17 245 63 1989 113 6 60 chr5 73875801 73876119 -129209413 + AluSx SINE Alu 5 305 -7 279 301 105 65 chr5 73876119 73876178 -129209354 - MIR SINE MIR -199 63 8 251 250 317 18 chr5 73876327 73876491 -129209041 + MIR SINE MIR 50 262 0 417 215 0 0 chr5 73876590 73876669 -129208863 - L2 LINE L2 -5 3308 3230 22 43 0 21 chr5 73876708 73876741 -129208791 + AT_rich Low_complexity Low_complexity 1 34 -12 1808 178 0 0 chr5 73876741 73877034 -129208498 - AluJo SINE Alu -19 293 1 22 43 0 21 chr5 73877034 73877047 -129208485 + AT_rich Low_complexity Low_complexity 34 46 0 23 54 0 0 chr5 73877303 73877340 -129208192 + AT_rich Low_complexity Low_complexity 1 37 0 241 222 61 30 chr5 73877847 73877946 -129207586 + L1ME4a LINE L1 5964 6065 -56 461 324 76 16 chr5 73878027 73878212 -129207320 - MIR SINE MIR -48 214 19 329 269 56 9 chr5 73878651 73878759 -129206773 - L2 LINE L2 -1 3312 3200 1557 242 131 38 chr5 73879916 73880052 -129205480 - L1MC4 LINE L1 0 8042 7920 183 80 0 0 chr5 73880052 73880077 -129205455 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1557 242 131 38 chr5 73880077 73880755 -129204777 - L1MC4 LINE L1 -122 7920 7152 270 0 0 0 chr5 73880855 73880885 -129204647 + (T)n Simple_repeat Simple_repeat 1 30 0 405 320 39 32 chr5 73881116 73881272 -129204260 + MIR3 SINE MIR 45 201 -7 1041 182 0 0 chr5 73881411 73881576 -129203956 - FRAM SINE Alu -12 164 1 2099 136 0 0 chr5 73881888 73882190 -129203342 - AluSq SINE Alu -11 302 1 208 252 84 47 chr5 73882424 73882531 -129203001 + MIR SINE MIR 152 262 0 474 237 26 58 chr5 73883234 73883390 -129202142 + L2 LINE L2 3163 3313 0 825 239 91 32 chr5 73884612 73884897 -129200635 + L2 LINE L2 3011 3312 -1 627 281 113 5 chr5 73885106 73885327 -129200205 + MIR SINE MIR 8 252 -10 728 264 83 0 chr5 73886119 73886373 -129199159 - L1ME LINE L1 -304 5817 5543 297 317 12 0 chr5 73887700 73887782 -129197750 + L2 LINE L2 3185 3267 -5 778 261 87 4 chr5 73890632 73890873 -129194659 + MIR SINE MIR 2 262 0 2807 90 12 2 chr5 73891174 73891573 -129193959 + L1PA13 LINE L1 5756 6158 -5 256 297 11 0 chr5 73892344 73892435 -129193097 - Charlie7 DNA MER1_type -2516 96 5 193 319 47 89 chr5 73893896 73894065 -129191467 + MIR SINE MIR 47 208 -54 561 282 89 22 chr5 73894093 73894497 -129191035 - L1ME LINE L1 -1302 4844 4414 476 273 157 25 chr5 73894640 73895119 -129190413 - L1ME LINE L1 -1931 4215 3643 269 262 81 28 chr5 73895417 73895558 -129189974 - MLT1H LTR MaLR -250 159 19 413 297 65 0 chr5 73895629 73895784 -129189748 - L1ME LINE L1 -2608 3538 3374 310 314 98 49 chr5 73895889 73896236 -129189296 - L1 LINE L1 -1006 5140 4777 1412 159 34 41 chr5 73897926 73898105 -129187427 - L1MA3 LINE L1 -1 6304 6126 2774 13 0 0 chr5 73898105 73898408 -129187124 + AluYb8 SINE Alu 1 303 -15 1412 159 34 41 chr5 73898408 73898548 -129186984 - L1MA3 LINE L1 -179 6126 5987 1433 115 0 0 chr5 73900629 73900820 -129184712 - AluSc SINE Alu -14 295 105 867 240 151 18 chr5 73901127 73901465 -129184067 - MLT1J1 LTR MaLR -15 431 49 214 279 139 0 chr5 73903830 73903916 -129181616 + MIR3 SINE MIR 111 208 0 192 286 53 98 chr5 73904287 73904420 -129181112 - MIR3 SINE MIR -78 130 4 1164 148 201 21 chr5 73906188 73906472 -129179060 + MER44D DNA MER2_type 4 608 -1 1264 98 26 10 chr5 73907036 73907229 -129178303 - MER30 DNA MER1_type -34 196 1 626 232 85 24 chr5 73907684 73907848 -129177684 - MER5B DNA MER1_type -4 174 1 28 0 0 0 chr5 73908549 73908577 -129176955 + AT_rich Low_complexity Low_complexity 1 28 0 228 180 0 0 chr5 73909057 73909107 -129176425 + L1ME4a LINE L1 6061 6110 -11 219 255 41 41 chr5 73909702 73909800 -129175732 + MIR SINE MIR 46 143 -119 26 0 0 0 chr5 73910162 73910188 -129175344 + AT_rich Low_complexity Low_complexity 1 26 0 1583 145 0 134 chr5 73910665 73911009 -129174523 - AluJb SINE Alu -14 298 1 23 0 0 0 chr5 73911093 73911116 -129174416 + AT_rich Low_complexity Low_complexity 1 23 0 244 276 17 0 chr5 73912945 73913003 -129172529 - MIR SINE MIR -111 151 93 835 236 43 47 chr5 73913741 73913810 -129171722 + MIR SINE MIR 2 70 -192 2232 145 11 21 chr5 73913810 73914189 -129171343 + THE1C LTR MaLR 1 375 0 835 236 43 47 chr5 73914189 73914373 -129171159 + MIR SINE MIR 70 254 -8 1938 119 0 55 chr5 73914375 73914687 -129170845 - AluSx SINE Alu -17 295 1 3016 130 150 0 chr5 73915533 73916148 -129169384 - Tigger3(Golem) DNA MER2_type 0 3028 2310 477 0 0 0 chr5 73916148 73916201 -129169331 + (CA)n Simple_repeat Simple_repeat 2 54 0 3016 130 150 0 chr5 73916201 73916233 -129169299 - Tigger3(Golem) DNA MER2_type -718 2310 2284 535 229 0 0 chr5 73916236 73916341 -129169191 - Tigger3(Golem) DNA MER2_type -2924 105 1 22 35 0 0 chr5 73920576 73920605 -129164927 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 73920705 73920747 -129164785 + AT_rich Low_complexity Low_complexity 1 42 0 196 274 35 62 chr5 73924129 73924242 -129161290 + L2 LINE L2 2456 2565 -749 27 0 0 0 chr5 73924669 73924696 -129160836 + AT_rich Low_complexity Low_complexity 1 27 0 394 281 187 10 chr5 73924735 73924938 -129160594 + MIR SINE MIR 20 258 -4 558 243 48 29 chr5 73924992 73925202 -129160330 - LTR33 LTR ERVL -1 520 307 372 231 97 8 chr5 73925302 73925436 -129160096 - LTR33 LTR ERVL -363 158 13 24 0 0 0 chr5 73926340 73926364 -129159168 + AT_rich Low_complexity Low_complexity 1 24 0 205 283 0 17 chr5 73926689 73926749 -129158783 - MIR SINE MIR -119 143 85 2012 151 0 3 chr5 73926781 73927073 -129158459 + AluJb SINE Alu 5 295 -17 260 192 27 41 chr5 73927073 73927146 -129158386 + L1ME LINE L1 5820 5891 -230 3964 140 18 8 chr5 73927188 73927851 -129157681 + L1PA15 LINE L1 5496 6165 0 276 30 0 0 chr5 73927916 73927949 -129157583 + (TG)n Simple_repeat Simple_repeat 2 34 0 236 219 70 79 chr5 73928489 73928603 -129156929 + MER5B DNA MER1_type 3 115 -63 279 0 0 0 chr5 73928762 73928793 -129156739 + (TA)n Simple_repeat Simple_repeat 1 31 0 198 0 0 0 chr5 73928793 73928815 -129156717 + (T)n Simple_repeat Simple_repeat 1 22 0 301 321 69 28 chr5 73929507 73929725 -129155807 - L2 LINE L2 -182 3090 2864 527 354 125 16 chr5 73929761 73930250 -129155282 - L2 LINE L2 -528 2786 2245 414 260 68 94 chr5 73931830 73932065 -129153467 + MIR SINE MIR 8 236 -26 319 303 42 8 chr5 73932156 73932275 -129153257 + MIR SINE MIR 63 185 -77 1726 167 43 43 chr5 73932301 73932673 -129152859 - MLT1A2 LTR MaLR 0 374 3 531 0 0 0 chr5 73935044 73935103 -129150429 + (TG)n Simple_repeat Simple_repeat 2 60 0 276 309 161 47 chr5 73935431 73935580 -129149952 - L2 LINE L2 0 3272 3107 370 283 21 43 chr5 73935766 73935953 -129149579 - L2 LINE L2 -987 2327 2145 342 0 0 0 chr5 73935990 73936028 -129149504 + (TA)n Simple_repeat Simple_repeat 1 38 0 5297 48 8 0 chr5 73936037 73936687 -129148845 - L1PA6 LINE L1 -18 6136 5482 598 278 75 19 chr5 73936832 73937044 -129148488 - MIR SINE MIR 0 262 39 2124 141 0 6 chr5 73938251 73938564 -129146968 + AluSx SINE Alu 1 311 -1 1230 146 0 0 chr5 73938565 73938750 -129146782 + AluSg/x SINE Alu 127 311 -1 282 365 5 18 chr5 73938784 73939003 -129146529 + MLT1K LTR MaLR 363 578 -10 360 298 40 7 chr5 73940269 73940420 -129145112 + CT-rich Low_complexity Low_complexity 5 160 0 294 379 29 14 chr5 73941101 73941241 -129144291 - MIR3 SINE MIR 0 208 67 1772 160 80 12 chr5 73941347 73941685 -129143847 + MER46B DNA MER2_type 1 236 0 304 174 106 137 chr5 73942940 73943054 -129142478 - MIR SINE MIR -1 261 152 1778 172 10 3 chr5 73943054 73943345 -129142187 - AluJb SINE Alu -19 293 1 304 174 106 137 chr5 73943345 73943391 -129142141 - MIR SINE MIR -110 152 106 27 0 0 0 chr5 73944785 73944812 -129140720 + AT_rich Low_complexity Low_complexity 1 27 0 240 237 0 0 chr5 73944953 73945012 -129140520 - FLAM_A SINE Alu -2 131 73 185 254 55 18 chr5 73945078 73945133 -129140399 + L2 LINE L2 3211 3267 -5 889 278 131 8 chr5 73945209 73945708 -129139824 - MLT1F1 LTR MaLR 0 567 10 1980 143 148 5 chr5 73945963 73946335 -129139197 + MSTA LTR MaLR 4 428 0 1974 138 14 7 chr5 73946777 73947073 -129138459 + AluJo SINE Alu 1 298 -14 641 302 97 27 chr5 73948100 73948845 -129136687 - L1ME3A LINE L1 -318 5852 5161 1767 123 3 137 chr5 73948845 73949202 -129136330 - AluSx SINE Alu -3 309 1 641 302 97 27 chr5 73949202 73949908 -129135624 - L1ME3A LINE L1 -1009 5161 4298 771 276 78 9 chr5 73950977 73951209 -129134323 + MIR SINE MIR 12 259 -3 208 135 0 0 chr5 73951654 73951691 -129133841 + (A)n Simple_repeat Simple_repeat 1 37 0 454 208 160 8 chr5 73952245 73952370 -129133162 - MIR SINE MIR -2 260 117 203 329 0 0 chr5 73953713 73953783 -129131749 - MIR SINE MIR -69 139 70 359 338 20 13 chr5 73954380 73954531 -129131001 + CT-rich Low_complexity Low_complexity 3 154 0 391 251 89 59 chr5 73954548 73954889 -129130643 + LTR33 LTR ERVL 112 521 0 682 284 258 18 chr5 73954952 73955332 -129130200 - L2 LINE L2 0 3313 2843 337 108 62 46 chr5 73955524 73955589 -129129943 + MLT1C LTR MaLR 1 66 -401 818 152 25 111 chr5 73955594 73955792 -129129740 + MLT1C LTR MaLR 210 467 0 437 241 23 154 chr5 73955792 73956137 -129129395 - L2 LINE L2 -720 2594 2295 2346 103 0 0 chr5 73956692 73956992 -129128540 + AluSx SINE Alu 1 300 -12 1483 174 60 13 chr5 73957639 73957819 -129127713 - AluJo SINE Alu 0 312 111 207 0 0 0 chr5 73957819 73957842 -129127690 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1483 174 60 13 chr5 73957842 73957959 -129127573 - AluJo SINE Alu -201 111 1 402 173 0 0 chr5 73959295 73959370 -129126162 + (TA)n Simple_repeat Simple_repeat 1 75 0 1368 191 97 37 chr5 73961915 73962317 -129123215 + MER63B DNA MER1_type 1 426 -10 2405 95 0 0 chr5 73963047 73963352 -129122180 - AluSx SINE Alu -7 305 1 239 291 77 77 chr5 73964479 73964596 -129120936 + MIR3 SINE MIR 49 165 -43 629 286 20 30 chr5 73966290 73966489 -129119043 + MIR SINE MIR 49 245 -17 22 0 0 0 chr5 73966634 73966656 -129118876 + AT_rich Low_complexity Low_complexity 1 22 0 1527 194 3 24 chr5 73966656 73966949 -129118583 - AluJo SINE Alu -25 287 1 788 249 39 30 chr5 73968189 73968422 -129117110 - MIR SINE MIR -26 236 2 272 149 254 0 chr5 73968566 73968633 -129116899 - L1ME3A LINE L1 -5 6165 6082 331 257 14 0 chr5 73969332 73969406 -129116126 - MIR SINE MIR -147 115 41 299 198 0 89 chr5 73969757 73969880 -129115652 + L1MC4a LINE L1 5305 5413 -780 2442 55 0 0 chr5 73969880 73970169 -129115363 + AluY SINE Alu 1 289 -22 299 198 0 89 chr5 73970169 73970196 -129115336 + L1MC4a LINE L1 5413 5441 -752 222 171 0 0 chr5 73970221 73970262 -129115270 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1712 182 0 17 chr5 73970377 73970679 -129114853 - AluJb SINE Alu -6 306 10 813 303 69 19 chr5 73970683 73971106 -129114426 + L1MC4a LINE L1 5510 5953 -1855 262 208 19 19 chr5 73971721 73971774 -129113758 - L2 LINE L2 -16 3256 3204 361 224 136 27 chr5 73971851 73971998 -129113534 - L1ME3A LINE L1 -1 6169 6007 21 0 0 0 chr5 73972985 73973006 -129112526 + AT_rich Low_complexity Low_complexity 1 21 0 684 289 61 25 chr5 73973061 73973598 -129111934 - L1M4 LINE L1 -4842 1482 880 268 215 75 70 chr5 73973622 73973808 -129111724 + L1MCc LINE L1 1166 1352 -5071 * 326 309 28 35 chr5 73973806 73974088 -129111444 + L1MCc LINE L1 4 283 -6140 2527 63 0 0 chr5 73974298 73974599 -129110933 - AluSg SINE Alu -9 301 1 595 298 94 4 chr5 73976769 73977004 -129108528 - MIR SINE MIR 0 262 7 196 30 61 0 chr5 73977924 73977957 -129107575 + A-rich Low_complexity Low_complexity 2 36 0 488 234 64 41 chr5 73978286 73978457 -129107075 - MLT1J LTR MaLR -1 510 336 237 250 46 65 chr5 73978481 73978589 -129106943 + MIR SINE MIR 86 191 -71 1137 31 23 0 chr5 73978799 73978929 -129106603 + AluY SINE Alu 1 133 -178 314 320 101 11 chr5 73980651 73980829 -129104703 - MIR SINE MIR -59 203 10 524 225 23 31 chr5 73981626 73981755 -129103777 + MIR SINE MIR 26 153 -109 302 324 125 27 chr5 73982191 73982592 -129102940 + L2 LINE L2 2538 2977 -337 378 293 61 11 chr5 73982656 73982837 -129102695 - MLT1L LTR MaLR 0 615 426 236 29 0 29 chr5 73984047 73984081 -129101451 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1874 105 3 80 chr5 73984089 73984402 -129101130 - AluSx SINE Alu -23 289 1 450 226 0 0 chr5 73985133 73985217 -129100315 + MER5B DNA MER1_type 95 178 0 935 249 234 29 chr5 73986134 73986583 -129098949 + L2 LINE L2 2091 2631 -683 2286 217 9 29 chr5 73986717 73987298 -129098234 - L1MD3 LINE L1 -18 7977 7409 472 179 10 24 chr5 73987298 73987395 -129098137 - MLT1F1 LTR MaLR -445 122 35 688 142 17 17 chr5 73989062 73989182 -129096350 + FLAM_A SINE Alu 23 142 0 210 71 0 0 chr5 73989471 73989499 -129096033 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 349 265 88 39 chr5 73993810 73993991 -129091541 + L1ME3A LINE L1 5773 5962 -208 300 27 0 0 chr5 73994305 73994342 -129091190 + (TG)n Simple_repeat Simple_repeat 2 38 0 200 173 0 39 chr5 73995534 73995586 -129089946 + (ATTG)n Simple_repeat Simple_repeat 1 50 0 31 0 0 0 chr5 73995595 73995626 -129089906 + AT_rich Low_complexity Low_complexity 1 31 0 993 171 24 47 chr5 73995646 73995857 -129089675 - L1PA16 LINE L1 -9 6157 5952 1696 110 16 8 chr5 73995999 73996245 -129089287 + AluSx SINE Alu 61 308 -4 4339 143 82 10 chr5 73996456 73997290 -129088242 - MER4D LTR ERV1 -9 894 1 2508 151 39 7 chr5 73997936 73998075 -129087457 - MER61B LTR ERV1 0 425 292 441 0 0 0 chr5 73998075 73998124 -129087408 + (GA)n Simple_repeat Simple_repeat 1 49 0 2508 151 39 7 chr5 73998124 73998396 -129087136 - MER61B LTR ERV1 -133 292 1 456 19 0 0 chr5 73998501 73998554 -129086978 + (TG)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr5 73998802 73998824 -129086708 + AT_rich Low_complexity Low_complexity 1 22 0 210 253 24 129 chr5 73999262 73999432 -129086100 + MER5B DNA MER1_type 27 178 0 814 219 127 5 chr5 73999697 73999902 -129085630 + MIR SINE MIR 12 241 -21 376 306 47 65 chr5 74000381 74000551 -129084981 - MIR3 SINE MIR -9 199 33 2095 151 37 3 chr5 74000629 74000981 -129084551 + THE1B LTR MaLR 1 364 0 2387 99 10 0 chr5 74001658 74001962 -129083570 - AluSc SINE Alu -2 307 1 1483 166 6 105 chr5 74002336 74002661 -129082871 + AluJo SINE Alu 1 293 -9 1274 252 39 33 chr5 74004034 74004494 -129081038 - L1ME1 LINE L1 -6 6160 5698 * 2138 209 101 13 chr5 74004492 74005119 -129080413 - L1ME1 LINE L1 -904 5242 4561 1116 151 41 37 chr5 74005645 74005863 -129079669 + MER20 DNA MER1_type 1 219 0 2166 110 0 13 chr5 74005896 74006204 -129079328 + AluSx SINE Alu 1 304 -8 901 170 204 11 chr5 74006890 74007155 -129078377 + MER33 DNA MER1_type 1 316 -8 652 290 108 38 chr5 74007684 74008757 -129076775 - L1MC4a LINE L1 -743 5403 4695 21 0 0 0 chr5 74008806 74008827 -129076705 + AT_rich Low_complexity Low_complexity 1 21 0 1563 115 0 0 chr5 74009812 74010012 -129075520 + AluSg/x SINE Alu 75 274 -36 351 0 0 0 chr5 74010015 74010054 -129075478 + (CA)n Simple_repeat Simple_repeat 2 40 0 2272 104 10 3 chr5 74010294 74010603 -129074929 + AluSx SINE Alu 1 311 -1 246 264 23 35 chr5 74010662 74010749 -129074783 + L1MC4 LINE L1 6772 6857 -1185 717 12 0 0 chr5 74010783 74010814 -129074718 + (TTCC)n Simple_repeat Simple_repeat 1 113 0 717 12 0 0 chr5 74010814 74010896 -129074636 + (TTCC)n Simple_repeat Simple_repeat 2 83 0 26 50 0 0 chr5 74011231 74011271 -129074261 + AT_rich Low_complexity Low_complexity 1 40 0 1687 116 0 0 chr5 74011465 74011690 -129073842 - AluSp SINE Alu -72 241 17 1958 140 7 10 chr5 74012390 74012683 -129072849 + AluSx SINE Alu 1 292 -20 24 32 0 0 chr5 74015255 74015286 -129070246 + AT_rich Low_complexity Low_complexity 1 31 0 2080 74 40 40 chr5 74015312 74015608 -129069924 - AluY SINE Alu -15 296 1 258 220 20 0 chr5 74016616 74016666 -129068866 + L2 LINE L2 3214 3264 -8 1998 132 4 0 chr5 74017181 74017462 -129068070 + AluSx SINE Alu 1 282 -30 254 281 0 0 chr5 74017482 74017571 -129067961 + L1MC4 LINE L1 6615 6703 -1339 24 0 0 0 chr5 74017942 74017966 -129067566 + AT_rich Low_complexity Low_complexity 1 24 0 2250 174 44 18 chr5 74018645 74019100 -129066432 - MLT1C LTR MaLR 0 467 1 2791 184 14 44 chr5 74019885 74020456 -129065076 - MLT2B3 LTR ERVL 0 554 1 726 275 111 49 chr5 74020456 74020907 -129064625 + MLT1J LTR MaLR 33 511 0 741 264 78 9 chr5 74021234 74021567 -129063965 + Tigger8 DNA MER2_type 226 581 -85 738 199 0 0 chr5 74024775 74024906 -129060626 - FLAM_A SINE Alu -2 131 1 297 0 0 0 chr5 74025130 74025163 -129060369 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 219 175 25 0 chr5 74025912 74025952 -129059580 + MIR SINE MIR 53 93 -169 2368 110 7 0 chr5 74026574 74026882 -129058650 - AluSx SINE Alu -1 311 2 380 278 41 0 chr5 74026914 74027024 -129058508 - MIR SINE MIR -62 146 36 713 255 5 59 chr5 74027146 74027276 -129058256 + MIR SINE MIR 43 160 -102 2121 92 251 0 chr5 74027276 74027634 -129057898 - LTR7 LTR ERV1 -2 448 1 713 255 5 59 chr5 74027634 74027707 -129057825 + MIR SINE MIR 160 235 -27 300 227 35 128 chr5 74028052 74028193 -129057339 - L2 LINE L2 -8 3305 3178 234 274 36 36 chr5 74028267 74028351 -129057181 + L2 LINE L2 3185 3268 -4 257 242 88 0 chr5 74028958 74029049 -129056483 - L1 LINE L1 -1871 4275 4177 418 253 144 23 chr5 74029669 74029843 -129055689 + MER106A DNA MER1_type 42 236 0 412 259 71 10 chr5 74030056 74030253 -129055279 + L1MDb LINE L1 1118 1326 -5083 284 217 112 38 chr5 74030258 74030499 -129055033 - L1ME LINE L1 -613 5551 5302 745 84 11 152 chr5 74030635 74030813 -129054719 - Tigger1 DNA MER2_type -5 2413 2261 941 167 17 23 chr5 74030813 74030987 -129054545 + AluJo SINE Alu 115 287 -25 288 130 0 0 chr5 74030989 74031035 -129054497 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 11991 144 62 2 chr5 74031042 74033134 -129052398 - Tigger1 DNA MER2_type -173 2245 28 414 335 87 5 chr5 74033676 74033722 -129051810 + MIR SINE MIR 1 42 -220 1471 171 103 35 chr5 74033722 74034062 -129051470 - MLT1A1 LTR MaLR -2 363 1 414 335 87 5 chr5 74034062 74034200 -129051332 + MIR SINE MIR 42 200 -62 609 167 30 21 chr5 74035571 74035738 -129049794 - MLT1E1 LTR MaLR -2 652 379 447 227 310 20 chr5 74035781 74035984 -129049548 - MLT1E1 LTR MaLR -392 262 1 327 330 0 20 chr5 74039741 74039841 -129045691 - L2 LINE L2 -14 3299 3202 309 266 50 11 chr5 74040080 74040173 -129045359 + MIR SINE MIR 1 99 -109 2263 111 38 19 chr5 74040173 74040541 -129044991 + THE1C LTR MaLR 1 375 0 867 218 49 132 chr5 74040922 74041162 -129044370 - L1ME3A LINE L1 -61 6109 5921 3152 157 25 37 chr5 74041162 74041813 -129043719 - L1MB3 LINE L1 0 6183 5541 867 218 49 132 chr5 74041813 74042018 -129043514 - L1ME3A LINE L1 -249 5921 5701 906 182 78 17 chr5 74042278 74042509 -129043023 - MLT1D LTR MaLR -258 247 3 495 0 0 0 chr5 74042514 74042569 -129042963 + (TG)n Simple_repeat Simple_repeat 2 56 0 957 237 50 50 chr5 74042600 74043039 -129042493 - HAL1 LINE L1 -424 2083 1645 207 262 33 0 chr5 74043083 74043144 -129042388 + GA-rich Low_complexity Low_complexity 25 87 0 472 296 162 38 chr5 74043420 74043963 -129041569 + L2 LINE L2 2701 3311 -2 726 156 18 66 chr5 74044695 74044862 -129040670 - MER20 DNA MER1_type -18 201 43 741 260 178 32 chr5 74045354 74045536 -129039996 - L2 LINE L2 0 3313 3159 2078 138 0 0 chr5 74045536 74045826 -129039706 + AluSx SINE Alu 3 292 -20 1933 153 3 38 chr5 74045834 74046148 -129039384 + AluJb SINE Alu 1 303 -9 741 260 178 32 chr5 74046148 74046367 -129039165 - L2 LINE L2 -159 3154 2843 475 240 67 24 chr5 74046411 74046619 -129038913 - L1MC5 LINE L1 -35 7926 7710 318 118 26 40 chr5 74046811 74046887 -129038645 - L1MC5 LINE L1 -372 7589 7515 186 71 0 0 chr5 74046887 74046915 -129038617 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 828 163 0 0 chr5 74046915 74047038 -129038494 - FLAM_C SINE Alu -20 123 1 949 241 95 56 chr5 74047039 74047650 -129037882 - L1MC5 LINE L1 -449 7512 6878 536 251 159 26 chr5 74047665 74047892 -129037640 - L2 LINE L2 -536 2778 2522 197 374 0 0 chr5 74047903 74048018 -129037514 - L2 LINE L2 -933 2381 2267 568 170 0 10 chr5 74048263 74048363 -129037169 - FLAM_A SINE Alu -16 126 28 228 207 50 0 chr5 74048632 74048695 -129036837 - MER91A DNA MER1_type -5 185 123 236 315 212 20 chr5 74048702 74048848 -129036684 - MER91A DNA MER1_type -22 174 1 238 200 0 12 chr5 74048914 74048976 -129036556 + MIR3 SINE MIR 111 172 -36 291 114 0 0 chr5 74049056 74049100 -129036432 + (GA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 74049871 74049892 -129035640 + AT_rich Low_complexity Low_complexity 1 21 0 193 71 0 71 chr5 74051628 74051670 -129033862 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 588 256 0 0 chr5 74053214 74053343 -129032189 + FLAM_A SINE Alu 1 129 -4 1785 156 38 7 chr5 74053352 74053640 -129031892 + AluJb SINE Alu 11 307 -5 22 88 0 0 chr5 74054044 74054101 -129031431 + AT_rich Low_complexity Low_complexity 1 57 0 2347 64 3 10 chr5 74055436 74055732 -129029800 + AluY SINE Alu 1 294 -17 22 35 0 0 chr5 74055781 74055810 -129029722 + AT_rich Low_complexity Low_complexity 1 29 0 261 57 0 0 chr5 74056124 74056159 -129029373 + (T)n Simple_repeat Simple_repeat 1 35 0 218 337 30 20 chr5 74056687 74056788 -129028744 - L2 LINE L2 -504 2810 2709 219 291 39 29 chr5 74056961 74057064 -129028468 - MIR SINE MIR -58 204 101 229 323 10 40 chr5 74057176 74057275 -129028257 + L2 LINE L2 3218 3313 0 803 275 169 23 chr5 74057300 74057685 -129027847 - MLT1J1 LTR MaLR 0 446 6 290 330 158 15 chr5 74058388 74058591 -129026941 + L3 LINE CR1 1335 1566 -11 186 43 0 0 chr5 74058601 74058624 -129026908 + (A)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 74058677 74058698 -129026834 + AT_rich Low_complexity Low_complexity 1 21 0 331 287 9 26 chr5 74059414 74059529 -129026003 + L2 LINE L2 3201 3313 0 354 193 53 79 chr5 74059871 74059985 -129025547 + L2 LINE L2 3192 3302 -11 273 316 32 13 chr5 74060055 74060210 -129025322 + MER102b DNA MER1_type 175 332 -9 335 272 44 44 chr5 74060216 74060330 -129025202 + MIR SINE MIR 27 140 -68 499 275 51 0 chr5 74061629 74061767 -129023765 - MIR SINE MIR -8 254 110 247 325 9 9 chr5 74061785 74061899 -129023633 - MER94 DNA DNA -8 126 13 197 278 111 22 chr5 74062935 74063025 -129022507 + MIR SINE MIR 124 221 -41 528 284 294 21 chr5 74063476 74063857 -129021675 + L2 LINE L2 2492 2976 -338 1454 234 172 67 chr5 74063897 74064926 -129020606 - L1MC4 LINE L1 -31 8011 6875 648 287 140 20 chr5 74064957 74065257 -129020275 + L2 LINE L2 2978 3313 0 797 199 31 25 chr5 74065835 74066031 -129019501 + MLT1D LTR MaLR 1 197 -308 708 229 31 0 chr5 74066044 74066236 -129019296 + MLT1D LTR MaLR 308 505 0 2210 102 0 14 chr5 74066626 74066920 -129018612 + AluSx SINE Alu 1 290 -22 243 333 149 0 chr5 74067308 74067422 -129018110 - L2 LINE L2 -5 3267 3137 2214 92 3 3 chr5 74068023 74068315 -129017217 - AluSp SINE Alu -21 292 1 239 237 23 84 chr5 74072319 74072450 -129013082 + MER117 DNA MER1_type 69 191 -6 369 268 21 31 chr5 74072967 74073064 -129012468 - MIR SINE MIR -111 151 56 215 234 52 26 chr5 74074407 74074484 -129011048 + MIR SINE MIR 68 146 -116 509 268 8 8 chr5 74074894 74075017 -129010515 - L2 LINE L2 -5 3308 3186 245 281 60 97 chr5 74075270 74075401 -129010131 - L2 LINE L2 -439 2875 2754 418 99 28 0 chr5 74075401 74075472 -129010060 - L1PA10 LINE L1 0 6168 6096 245 281 60 97 chr5 74075472 74075557 -129009975 - L2 LINE L2 -560 2754 2667 21 0 0 0 chr5 74080121 74080142 -129005390 + AT_rich Low_complexity Low_complexity 1 21 0 464 260 16 16 chr5 74081008 74081131 -129004401 + L2 LINE L2 3186 3308 -5 215 234 52 26 chr5 74081541 74081618 -129003914 - MIR SINE MIR -116 146 68 1654 138 0 4 chr5 74083216 74083447 -129002085 + AluSq SINE Alu 1 230 -83 224 167 56 0 chr5 74083468 74083522 -129002010 + A-rich Low_complexity Low_complexity 2 58 0 303 261 45 45 chr5 74083607 74083718 -129001814 - L1 LINE L1 -876 5270 5160 1863 73 13 0 chr5 74083747 74083981 -129001551 + AluY SINE Alu 1 237 -74 2330 103 0 3 chr5 74084287 74084589 -129000943 + AluSx SINE Alu 1 301 -11 2084 246 52 14 chr5 74084664 74085216 -129000316 - MER21B LTR ERV1 -197 666 94 639 205 0 8 chr5 74085227 74085349 -129000183 + AluJo/FLAM SINE Alu 1 121 -181 2038 130 0 30 chr5 74085351 74085652 -128999880 - AluSx SINE Alu -20 292 1 634 125 0 130 chr5 74086565 74086781 -128998751 - AluSq SINE Alu -125 188 1 426 261 70 0 chr5 74088383 74088525 -128997007 - MER21B LTR ERV1 -51 812 661 554 201 43 7 chr5 74088530 74088669 -128996863 - LTR36 LTR ERV1 0 611 468 1577 136 0 0 chr5 74088674 74088894 -128996638 + AluJb SINE Alu 5 224 -88 2329 116 0 0 chr5 74089036 74089346 -128996186 - AluSx SINE Alu -2 310 1 193 150 33 117 chr5 74089942 74090002 -128995530 - L2 LINE L2 -74 3198 3144 34 72 0 0 chr5 74090042 74090111 -128995421 + AT_rich Low_complexity Low_complexity 1 69 0 1548 111 10 5 chr5 74090124 74090331 -128995201 + AluSg/x SINE Alu 84 291 -19 1817 122 36 16 chr5 74090519 74090822 -128994710 + MER1B DNA MER1_type 31 339 0 246 187 93 80 chr5 74091284 74091359 -128994173 - MER21B LTR ERV1 -767 96 21 360 316 133 27 chr5 74092004 74092336 -128993196 + MLT1J LTR MaLR 109 475 -36 307 359 55 6 chr5 74092812 74092993 -128992539 + L1 LINE L1 4934 5123 -1023 577 141 96 7 chr5 74093005 74093140 -128992392 - AluSg/x SINE Alu -15 294 148 721 176 0 17 chr5 74093441 74093560 -128991972 - FLAM_A SINE Alu -15 127 11 23 33 0 0 chr5 74094492 74094522 -128991010 + AT_rich Low_complexity Low_complexity 1 30 0 421 201 60 15 chr5 74094616 74094750 -128990782 - L1MB4 LINE L1 -80 6100 5961 232 177 177 0 chr5 74095122 74095184 -128990348 - MLT1J LTR MaLR -42 469 397 811 188 48 0 chr5 74095358 74095544 -128989988 + L1MB4 LINE L1 5986 6180 0 2215 93 14 0 chr5 74096434 74096723 -128988809 + AluSp SINE Alu 5 297 -16 1936 119 14 4 chr5 74096753 74097030 -128988502 + AluSx SINE Alu 14 293 -19 292 252 88 68 chr5 74097399 74097630 -128987902 - MIR SINE MIR -25 237 8 2507 76 0 0 chr5 74097932 74098233 -128987299 - AluSg SINE Alu -7 303 3 210 152 0 0 chr5 74098332 74098365 -128987167 + L2 LINE L2 3269 3301 -12 383 235 147 0 chr5 74099173 74099309 -128986223 + MER5A DNA MER1_type 32 187 -2 29 0 0 0 chr5 74103499 74103528 -128982004 + AT_rich Low_complexity Low_complexity 1 29 0 311 175 0 18 chr5 74104051 74104108 -128981424 - Tigger5 DNA MER2_type -5 2318 2263 367 213 0 0 chr5 74104128 74104203 -128981329 - Tigger5 DNA MER2_type 0 2323 2249 2105 124 0 10 chr5 74104204 74104502 -128981030 - AluSx SINE Alu -17 295 1 362 211 0 0 chr5 74104504 74104575 -128980957 + Tigger5 DNA MER2_type 2242 2312 -11 234 203 145 0 chr5 74104580 74104649 -128980883 - Tigger5 DNA MER2_type -2244 79 1 320 287 87 0 chr5 74105793 74105943 -128979589 + MER112 DNA MER1_type 7 169 -91 2314 111 0 0 chr5 74105956 74106262 -128979270 + AluSx SINE Alu 1 306 -6 201 171 0 0 chr5 74109849 74109884 -128975648 + A-rich Low_complexity Low_complexity 1 35 0 1674 164 18 7 chr5 74110957 74111301 -128974231 + AluJb SINE Alu 1 347 0 27 35 0 0 chr5 74111301 74111330 -128974202 + AT_rich Low_complexity Low_complexity 1 29 0 972 275 98 28 chr5 74112774 74113344 -128972188 + L1MC4a LINE L1 5359 5968 -1840 1416 183 67 14 chr5 74113452 74113737 -128971795 - AluJo SINE Alu -2 300 1 2190 102 0 0 chr5 74113794 74114079 -128971453 + AluSq SINE Alu 1 285 -28 287 250 120 38 chr5 74114113 74114297 -128971235 + L1MC4a LINE L1 5684 5882 -1926 1735 166 7 18 chr5 74114553 74114866 -128970666 + AluJo SINE Alu 1 310 0 2234 92 7 0 chr5 74115285 74115578 -128969954 - AluSc SINE Alu -14 295 1 2262 81 30 3 chr5 74116203 74116500 -128969032 + AluSg1 SINE Alu 1 305 -4 234 341 32 56 chr5 74116514 74116640 -128968892 - MER5B DNA MER1_type -34 144 22 1147 139 14 79 chr5 74117062 74117278 -128968254 - AluJo SINE Alu -22 290 89 477 146 146 0 chr5 74118047 74118150 -128967382 - L1MB2 LINE L1 -4 6167 6050 3090 68 9 2 chr5 74118150 74118579 -128966953 - L1PA8 LINE L1 -20 6152 5721 2463 149 10 51 chr5 74118580 74119090 -128966442 - L1MB2 LINE L1 -110 6061 5573 265 267 0 0 chr5 74119112 74119187 -128966345 - Tigger5 DNA MER2_type 0 2323 2249 216 158 0 0 chr5 74119189 74119227 -128966305 + (CGGA)n Simple_repeat Simple_repeat 3 40 0 1033 222 0 5 chr5 74119256 74119454 -128966078 - AluJo SINE Alu -92 220 24 2284 98 0 3 chr5 74119855 74120162 -128965370 - AluSx SINE Alu -6 306 1 243 268 0 0 chr5 74122181 74122237 -128963295 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 30 27 0 0 chr5 74122271 74122308 -128963224 + AT_rich Low_complexity Low_complexity 1 37 0 2336 83 3 0 chr5 74122376 74122676 -128962856 + AluSp SINE Alu 12 312 -1 678 223 67 8 chr5 74122696 74123006 -128962526 - L1MB2 LINE L1 -785 5520 5190 201 121 0 0 chr5 74123022 74123055 -128962477 + (CA)n Simple_repeat Simple_repeat 2 34 0 2064 123 0 7 chr5 74123703 74123987 -128961545 + AluSx SINE Alu 1 282 -30 299 25 25 0 chr5 74123990 74124030 -128961502 + (TAA)n Simple_repeat Simple_repeat 2 42 0 232 61 0 0 chr5 74124033 74124066 -128961466 + L1MA9 LINE L1 6280 6312 0 484 335 43 22 chr5 74124377 74124607 -128960925 + MIR SINE MIR 20 254 -8 259 227 13 27 chr5 74126979 74127054 -128958478 - MIR3 SINE MIR -5 203 130 363 208 61 0 chr5 74128008 74128112 -128957420 + L1ME1 LINE L1 6052 6164 0 24 0 0 0 chr5 74128142 74128166 -128957366 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 74128883 74128904 -128956628 + AT_rich Low_complexity Low_complexity 1 21 0 2179 91 3 24 chr5 74129411 74129708 -128955824 - AluSq SINE Alu -22 291 1 1948 148 0 0 chr5 74130120 74130403 -128955129 + AluSx SINE Alu 1 283 -29 180 0 0 0 chr5 74130403 74130423 -128955109 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 21 57 0 0 chr5 74131046 74131081 -128954451 + AT_rich Low_complexity Low_complexity 1 35 0 557 251 46 76 chr5 74131205 74131531 -128954001 + L1ME4a LINE L1 5530 5843 -278 2240 111 0 0 chr5 74131531 74131828 -128953704 + AluSq SINE Alu 1 297 -16 557 251 46 76 chr5 74131828 74131896 -128953636 + L1ME4a LINE L1 5843 5912 -209 699 292 52 23 chr5 74132981 74133289 -128952243 + LTR16C LTR ERVL 175 491 0 2241 86 10 3 chr5 74133329 74133620 -128951912 + AluSg SINE Alu 1 293 -17 220 229 0 0 chr5 74134215 74134263 -128951269 + (TA)n Simple_repeat Simple_repeat 2 49 0 1055 249 94 49 chr5 74135275 74135407 -128950125 + MLT1J LTR MaLR 70 195 -316 258 56 0 0 chr5 74135407 74135443 -128950089 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1055 249 94 49 chr5 74135443 74135715 -128949817 + MLT1J LTR MaLR 195 492 -19 1735 80 13 13 chr5 74136048 74136274 -128949258 + AluSq SINE Alu 1 226 -87 400 136 0 0 chr5 74136274 74136333 -128949199 - AluJ/FLAM SINE Alu -243 59 1 2142 112 7 13 chr5 74136403 74136707 -128948825 - AluSx SINE Alu -6 306 5 748 288 37 8 chr5 74137862 74138105 -128947427 + MIR SINE MIR 13 262 0 1039 106 0 0 chr5 74138280 74138412 -128947120 + AluSq/x SINE Alu 4 135 -177 2258 63 3 20 chr5 74138413 74138714 -128946818 + AluY SINE Alu 1 296 -15 1682 173 10 30 chr5 74139017 74139177 -128946355 - AluJo SINE Alu -17 295 142 2345 63 0 17 chr5 74139177 74139477 -128946055 - AluY SINE Alu -16 295 1 1682 173 10 30 chr5 74139477 74139617 -128945915 - AluJo SINE Alu -170 142 1 466 254 12 77 chr5 74141405 74141653 -128943879 - MER112 DNA MER1_type -12 248 17 1450 158 8 0 chr5 74141977 74142211 -128943321 - MER46A DNA MER2_type 0 236 1 2832 0 0 0 chr5 74143062 74143364 -128942168 - AluYa5 SINE Alu -9 302 1 180 111 0 0 chr5 74143732 74143759 -128941773 + (A)n Simple_repeat Simple_repeat 1 27 0 189 250 0 0 chr5 74143769 74143805 -128941727 + MIR SINE MIR 32 67 -141 348 198 12 25 chr5 74143902 74143983 -128941549 - MER116 DNA Mariner 0 80 1 414 296 78 117 chr5 74144851 74145467 -128940065 + L1M2 LINE L1 757 1348 -5501 197 356 84 21 chr5 74146050 74146241 -128939291 + L2 LINE L2 2472 2674 -640 356 282 111 34 chr5 74146727 74146918 -128938614 - MIR SINE MIR -48 214 8 376 310 21 78 chr5 74146934 74147076 -128938456 - L2 LINE L2 -1 3271 3138 180 111 0 0 chr5 74147119 74147146 -128938386 + (A)n Simple_repeat Simple_repeat 1 27 0 22 35 0 0 chr5 74147596 74147625 -128937907 + AT_rich Low_complexity Low_complexity 1 29 0 2114 131 3 3 chr5 74147652 74147981 -128937551 - pTR5 LTR ERV1 -2044 394 66 313 245 31 20 chr5 74147981 74148079 -128937453 - LTR30 LTR ERV1 -80 642 544 843 105 204 0 chr5 74148079 74148231 -128937301 - pTR5 LTR ERV1 -413 2025 1843 2167 126 0 0 chr5 74148680 74148974 -128936558 + AluSq SINE Alu 1 294 -19 330 329 49 44 chr5 74149031 74149234 -128936298 + MIR SINE MIR 20 221 -41 26 50 0 0 chr5 74149341 74149381 -128936151 + AT_rich Low_complexity Low_complexity 1 40 0 474 263 25 8 chr5 74149855 74149973 -128935559 + L2 LINE L2 3191 3310 -3 25 0 0 0 chr5 74150053 74150078 -128935454 + AT_rich Low_complexity Low_complexity 1 25 0 2322 86 0 3 chr5 74150358 74150650 -128934882 - AluSq SINE Alu -14 299 9 2315 101 0 3 chr5 74150949 74151255 -128934277 + AluSq SINE Alu 1 305 -8 342 0 0 0 chr5 74152089 74152127 -128933405 + (TA)n Simple_repeat Simple_repeat 2 39 0 1667 165 7 7 chr5 74152132 74152411 -128933121 - AluJb SINE Alu -33 279 1 180 307 27 13 chr5 74153503 74153578 -128931954 - MIR3 SINE MIR -1 207 132 31 58 0 0 chr5 74153907 74153959 -128931573 + AT_rich Low_complexity Low_complexity 1 52 0 837 214 14 0 chr5 74154308 74154448 -128931084 - FRAM SINE Alu -30 146 5 1425 163 37 8 chr5 74154453 74154699 -128930833 - AluJo SINE Alu -17 295 43 238 156 244 0 chr5 74155709 74155754 -128929778 + tRNA-Gly-GGC tRNA tRNA 11 66 -8 404 99 5 170 chr5 74156190 74156402 -128929130 + AluY SINE Alu 7 183 -128 1485 129 70 52 chr5 74156976 74157248 -128928284 + AluJo SINE Alu 21 297 -15 1224 162 4 38 chr5 74157251 74157486 -128928046 + AluJb SINE Alu 86 312 0 459 235 0 0 chr5 74157492 74157594 -128927938 + L1ME LINE L1 5598 5699 -422 1115 128 39 81 chr5 74158076 74158310 -128927222 + AluJo SINE Alu 85 308 -4 2188 100 40 10 chr5 74158311 74158646 -128926886 + AluSx SINE Alu 2 345 0 2419 89 0 6 chr5 74159176 74159491 -128926041 + AluSq SINE Alu 1 313 0 2312 100 0 7 chr5 74160470 74160779 -128924753 + AluSg SINE Alu 1 307 -3 231 272 120 6 chr5 74161105 74161234 -128924298 - MIR SINE MIR -10 252 30 382 195 9 62 chr5 74162634 74162747 -128922785 + AluYa8 SINE Alu 22 128 -172 259 75 0 50 chr5 74162924 74162964 -128922568 + AluSc SINE Alu 250 287 -12 473 329 67 0 chr5 74164192 74164356 -128921176 - MIR3 SINE MIR -14 194 20 2213 83 0 24 chr5 74165378 74165668 -128919864 + AluSg SINE Alu 13 295 -15 1072 190 117 8 chr5 74166164 74166411 -128919121 + MER58 DNA MER1_type 1 274 -2146 328 359 0 16 chr5 74166597 74166725 -128918807 - MER5A DNA MER1_type -29 160 35 420 176 33 33 chr5 74167564 74167655 -128917877 - MIR3 SINE MIR -6 202 112 269 284 11 21 chr5 74168654 74168749 -128916783 + (TATG)n Simple_repeat Simple_repeat 2 95 0 198 0 0 0 chr5 74168795 74168817 -128916715 + (TG)n Simple_repeat Simple_repeat 2 23 0 271 309 106 0 chr5 74168957 74169051 -128916481 - L2 LINE L2 -25 3247 3144 2308 212 72 38 chr5 74169442 74170094 -128915438 - L1ME3 LINE L1 -6 6156 5483 243 61 0 0 chr5 74170151 74170184 -128915348 + (TG)n Simple_repeat Simple_repeat 2 34 0 983 211 0 6 chr5 74170219 74170390 -128915142 - FAM SINE Alu -5 170 1 681 167 0 0 chr5 74170569 74170677 -128914855 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3783 121 92 10 chr5 74170668 74171361 -128914171 + Tigger3(Golem) DNA MER2_type 2278 3027 -2 277 279 163 12 chr5 74171506 74171592 -128913940 - MER94 DNA DNA -1 133 35 2204 102 0 0 chr5 74172241 74172526 -128913006 + AluSg SINE Alu 1 285 -25 210 37 0 0 chr5 74172526 74172553 -128912979 + (CATA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 74172925 74172953 -128912579 + AT_rich Low_complexity Low_complexity 1 28 0 2499 40 0 3 chr5 74173229 74173526 -128912006 - AluY SINE Alu -15 296 1 1419 138 119 30 chr5 74173757 74174025 -128911507 + AluJo SINE Alu 7 298 -14 2263 80 0 7 chr5 74174036 74174322 -128911210 + AluSg SINE Alu 7 290 -20 26 0 0 0 chr5 74174733 74174759 -128910773 + AT_rich Low_complexity Low_complexity 1 26 0 1231 186 37 15 chr5 74175068 74175337 -128910195 - L1PB4 LINE L1 0 6156 5882 4222 67 76 69 chr5 74175340 74175795 -128909737 - PABL_A LTR ERV1 0 660 197 840 153 23 28 chr5 74175795 74175972 -128909560 + L1MB2 LINE L1 5996 6171 0 4222 67 76 69 chr5 74175972 74176171 -128909361 - PABL_A LTR ERV1 -463 197 1 609 78 0 0 chr5 74176171 74176248 -128909284 - L1PA15 LINE L1 -283 5882 5806 194 133 0 22 chr5 74176283 74176328 -128909204 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr5 74176371 74176393 -128909139 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 74176520 74176556 -128908976 + AT_rich Low_complexity Low_complexity 1 36 0 2103 113 3 17 chr5 74177012 74177314 -128908218 + AluSx SINE Alu 1 298 -14 364 121 0 0 chr5 74177258 74177316 -128908216 + Alu SINE Alu 241 298 -2 212 314 58 44 chr5 74177316 74177453 -128908079 - L2 LINE L2 -31 3282 3144 285 407 51 0 chr5 74177730 74177907 -128907625 - L2 LINE L2 -573 2741 2556 863 142 115 111 chr5 74177925 74178178 -128907354 - Tigger7 DNA MER2_type 0 2491 2238 323 326 216 6 chr5 74178308 74178664 -128906868 - L2 LINE L2 -938 2376 1946 1451 176 7 31 chr5 74178813 74179129 -128906403 - AluSx SINE Alu 0 309 1 1829 91 29 26 chr5 74180777 74181086 -128904446 + AluSx SINE Alu 1 310 -2 192 40 0 0 chr5 74181519 74181544 -128903988 + (CCCCCA)n Simple_repeat Simple_repeat 2 26 0 1433 110 5 28 chr5 74181887 74182105 -128903427 - AluSp SINE Alu -99 214 2 831 164 0 0 chr5 74182111 74182239 -128903293 - FLAM_C SINE Alu -5 128 1 310 280 19 56 chr5 74182307 74182414 -128903118 - L2 LINE L2 -193 3079 2977 23 0 0 0 chr5 74189223 74189246 -128896286 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 74189836 74189859 -128895673 + GC_rich Low_complexity Low_complexity 1 23 0 2102 100 20 13 chr5 74190223 74190523 -128895009 - AluSq SINE Alu -11 302 1 429 158 53 97 chr5 74190526 74190640 -128894892 - MLT1C LTR MaLR -325 142 34 2086 105 0 29 chr5 74190641 74190954 -128894578 - AluSx SINE Alu -8 304 1 405 227 25 42 chr5 74192010 74192129 -128893403 - MER104 DNA Tc2 -1 179 63 225 275 0 43 chr5 74194669 74194738 -128890794 - L2 LINE L2 -203 3069 3004 2046 117 7 0 chr5 74194874 74195182 -128890350 + AluSx SINE Alu 3 312 0 210 254 44 23 chr5 74195457 74195560 -128889972 - MIR SINE MIR -22 186 80 995 167 43 60 chr5 74197334 74197377 -128888155 - AluJo SINE Alu -44 268 226 2151 122 0 0 chr5 74197377 74197680 -128887852 + AluSx SINE Alu 1 303 -9 995 167 43 60 chr5 74197680 74197870 -128887662 - AluJo SINE Alu -86 226 39 2104 102 30 3 chr5 74197972 74198276 -128887256 + AluSx SINE Alu 1 312 0 1510 101 8 30 chr5 74198599 74198836 -128886696 + AluSg/x SINE Alu 67 298 -14 2282 83 0 0 chr5 74199192 74199482 -128886050 - AluSg SINE Alu -20 290 1 1790 150 3 3 chr5 74199503 74199803 -128885729 - AluJo SINE Alu -12 300 1 1060 138 6 6 chr5 74199874 74200048 -128885484 - AluSx SINE Alu -10 300 127 1455 210 70 9 chr5 74200556 74200884 -128884648 - MLT1C LTR MaLR 0 467 120 2288 94 0 3 chr5 74200884 74201192 -128884340 - AluSq SINE Alu -6 307 1 865 165 5 62 chr5 74201228 74201422 -128884110 - AluJb SINE Alu -124 188 6 883 83 15 8 chr5 74201577 74201709 -128883823 - AluSx SINE Alu -180 133 1 883 143 0 8 chr5 74201895 74202028 -128883504 - FLAM_C SINE Alu -1 132 1 238 142 10 3 chr5 74202104 74202157 -128883375 - MIR SINE MIR -84 124 70 446 280 27 27 chr5 74202354 74202504 -128883028 + MIR SINE MIR 103 252 -10 1597 124 0 4 chr5 74203133 74203367 -128882165 - AluSc SINE Alu -76 233 1 1962 130 3 7 chr5 74203430 74203737 -128881795 - AluSp SINE Alu -5 308 3 456 319 139 34 chr5 74203802 74204009 -128881523 - L1MC/D LINE L1 -2166 5642 5393 2029 122 3 10 chr5 74204009 74204304 -128881228 - AluSx SINE Alu -16 296 4 456 319 139 34 chr5 74204304 74204391 -128881141 - L1MC/D LINE L1 -2415 5393 5317 330 26 0 0 chr5 74204977 74205016 -128880516 + (CA)n Simple_repeat Simple_repeat 1 39 0 220 211 28 14 chr5 74205524 74205595 -128879937 + GA-rich Low_complexity Low_complexity 1 72 0 363 312 6 51 chr5 74206115 74206272 -128879260 - MIR SINE MIR -29 233 84 476 307 22 34 chr5 74207917 74208096 -128877436 + MIR SINE MIR 73 249 -13 1069 199 63 54 chr5 74210062 74210413 -128875119 + MER47B DNA MER2_type 2 355 -63 2850 153 25 32 chr5 74212931 74213401 -128872131 + L1MB3 LINE L1 5626 6093 -90 2025 113 0 7 chr5 74213401 74213694 -128871838 + AluSc SINE Alu 1 291 -18 2850 153 25 32 chr5 74213694 74213778 -128871754 + L1MB3 LINE L1 6093 6176 -7 192 281 16 16 chr5 74214787 74214851 -128870681 - MIR SINE MIR -111 151 88 198 208 0 57 chr5 74215369 74215422 -128870110 - MIR SINE MIR -144 118 69 293 231 10 77 chr5 74215423 74215527 -128870005 + L2 LINE L2 3173 3269 -3 1252 223 60 11 chr5 74217414 74217697 -128867835 + MER58B DNA MER1_type 1 297 -44 45 19 0 0 chr5 74218804 74218856 -128866676 + AT_rich Low_complexity Low_complexity 1 52 0 325 36 72 72 chr5 74219997 74220080 -128865452 + GA-rich Low_complexity Low_complexity 5 87 0 262 296 25 0 chr5 74220245 74220326 -128865206 + (CATA)n Simple_repeat Simple_repeat 4 86 0 22 56 0 0 chr5 74220748 74220784 -128864748 + AT_rich Low_complexity Low_complexity 1 36 0 336 277 92 0 chr5 74221025 74221144 -128864388 + L1ME4a LINE L1 5523 5652 -469 414 241 54 54 chr5 74221146 74221257 -128864275 + L1ME4a LINE L1 5734 5847 -274 2217 82 20 0 chr5 74221257 74221550 -128863982 - AluSx SINE Alu -11 301 3 414 241 54 54 chr5 74221550 74221604 -128863928 + L1ME4a LINE L1 5846 5899 -222 345 234 86 55 chr5 74221608 74221736 -128863796 + L1ME4a LINE L1 5941 6072 -49 2344 66 0 3 chr5 74221819 74222122 -128863410 + AluY SINE Alu 1 302 -9 2570 144 12 7 chr5 74222645 74223054 -128862478 + LTR57 LTR ERVL 1 411 0 241 312 71 35 chr5 74223724 74223865 -128861667 + MIR SINE MIR 88 233 -29 2425 221 67 16 chr5 74224230 74224912 -128860620 + L1M4 LINE L1 3651 4367 -1779 480 182 20 10 chr5 74226387 74226486 -128859046 - MER94 DNA DNA -34 100 1 8484 214 31 53 chr5 74227658 74231291 -128854241 - L1 LINE L1 -1125 6440 2983 1912 164 7 0 chr5 74231291 74231596 -128853936 + AluSx SINE Alu 1 307 0 8484 214 31 53 chr5 74231596 74232464 -128853068 - L1 LINE L1 -4582 2983 2097 1618 283 79 24 chr5 74232466 74233102 -128852430 - L1 LINE L1 -5675 1891 1221 833 271 22 29 chr5 74233211 74233488 -128852044 + L1M2a LINE L1 2 276 -6892 2189 256 18 73 chr5 74233501 74234431 -128851101 - L1 LINE L1 -6288 1278 400 510 279 156 0 chr5 74234625 74234779 -128850753 + MER5A DNA MER1_type 12 189 0 302 241 35 0 chr5 74236177 74236264 -128849268 + MER20 DNA MER1_type 56 145 -74 564 262 124 26 chr5 74236277 74236659 -128848873 + L2 LINE L2 2814 3313 0 752 161 0 13 chr5 74236884 74237033 -128848499 + L1MB1 LINE L1 6013 6159 -30 312 98 26 119 chr5 74237276 74237470 -128848062 + (TATAG)n Simple_repeat Simple_repeat 1 176 0 237 197 33 59 chr5 74237397 74237549 -128847983 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 * 224 186 44 66 chr5 74237530 74237713 -128847819 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 * 289 119 0 60 chr5 74237770 74237837 -128847695 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 567 220 14 0 chr5 74237863 74238004 -128847528 + L1MA10 LINE L1 6191 6333 -1 598 219 88 59 chr5 74239134 74239372 -128846160 - MER115 DNA AcHobo -50 643 399 400 183 39 77 chr5 74239544 74239648 -128845884 + L1MD3 LINE L1 7447 7546 -449 737 307 56 13 chr5 74239654 74239885 -128845647 - MER115 DNA AcHobo -323 370 130 2377 79 0 0 chr5 74239920 74240210 -128845322 + AluSc SINE Alu 1 290 -19 239 175 32 16 chr5 74240418 74240481 -128845051 + L1MD3 LINE L1 7055 7118 -877 364 211 33 22 chr5 74240481 74240571 -128844961 + MLT1F1 LTR MaLR 34 124 -443 1962 202 78 28 chr5 74240571 74241135 -128844397 + L1MD3 LINE L1 7404 7995 0 243 287 182 33 chr5 74242239 74242420 -128843112 - MIR SINE MIR -20 242 35 380 298 111 20 chr5 74242959 74243157 -128842375 - L2 LINE L2 0 3313 3098 206 186 23 0 chr5 74243164 74243207 -128842325 + (TA)n Simple_repeat Simple_repeat 2 45 0 11227 173 55 36 chr5 74243638 74243763 -128841769 + L1MA7 LINE L1 2474 2595 -3696 2143 126 10 0 chr5 74243763 74244056 -128841476 + AluSx SINE Alu 1 296 -16 11227 173 55 36 chr5 74244056 74245609 -128839923 + L1MA7 LINE L1 2595 4118 -2173 306 50 0 0 chr5 74245609 74245649 -128839883 + (CA)n Simple_repeat Simple_repeat 1 40 0 11227 173 55 36 chr5 74245649 74247690 -128837842 + L1MA7 LINE L1 4118 6262 -29 335 103 0 0 chr5 74247709 74247767 -128837765 + L1MA7 LINE L1 6234 6291 0 192 92 0 138 chr5 74247975 74248105 -128837427 + (TA)n Simple_repeat Simple_repeat 2 113 0 265 70 0 177 chr5 74248149 74248697 -128836835 + (TA)n Simple_repeat Simple_repeat 1 450 0 492 70 0 142 chr5 74248756 74249174 -128836358 + (TA)n Simple_repeat Simple_repeat 1 358 0 458 94 0 170 chr5 74249194 74249590 -128835942 + (TA)n Simple_repeat Simple_repeat 1 328 0 301 176 10 108 chr5 74249595 74249697 -128835835 + L1MC4 LINE L1 6614 6705 -1337 216 219 0 47 chr5 74249702 74249766 -128835766 + (TA)n Simple_repeat Simple_repeat 2 62 0 24 0 0 0 chr5 74250286 74250310 -128835222 + AT_rich Low_complexity Low_complexity 1 24 0 1780 106 0 4 chr5 74250451 74250688 -128834844 - AluSx SINE Alu -76 236 1 27 29 0 0 chr5 74250806 74250840 -128834692 + AT_rich Low_complexity Low_complexity 1 34 0 183 80 0 0 chr5 74251108 74251133 -128834399 + (TG)n Simple_repeat Simple_repeat 2 26 0 215 273 45 15 chr5 74251325 74251391 -128834141 + MIR SINE MIR 108 175 -87 216 0 0 0 chr5 74251626 74251650 -128833882 + (A)n Simple_repeat Simple_repeat 1 24 0 830 183 0 0 chr5 74252310 74252479 -128833053 - L1MA3 LINE L1 0 6305 6137 2085 154 0 0 chr5 74253757 74254056 -128831476 + AluSx SINE Alu 1 299 -13 1826 135 42 68 chr5 74254061 74254446 -128831086 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr5 74254611 74254639 -128830893 + AT_rich Low_complexity Low_complexity 1 28 0 4365 133 188 51 chr5 74255757 74257067 -128828465 - pTR5 LTR ERV1 0 2438 743 405 95 0 0 chr5 74257902 74257965 -128827567 + (CA)n Simple_repeat Simple_repeat 2 64 0 2040 94 69 0 chr5 74258456 74258732 -128826800 + AluSq SINE Alu 10 304 -9 275 200 0 0 chr5 74258900 74258945 -128826587 - L2 LINE L2 -23 3249 3205 30 77 0 0 chr5 74259020 74259085 -128826447 + AT_rich Low_complexity Low_complexity 1 65 0 1800 180 10 0 chr5 74259356 74259656 -128825876 - AluJo SINE Alu -9 303 1 8608 195 31 21 chr5 74261025 74263182 -128822350 - L1PA15 LINE L1 -2 6163 4030 201 74 0 0 chr5 74263182 74263209 -128822323 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 2004 110 7 18 chr5 74263209 74263490 -128822042 - AluSx SINE Alu -29 283 6 8608 195 31 21 chr5 74263490 74264542 -128820990 - L1PA15 LINE L1 -2135 4030 2990 1435 120 0 0 chr5 74264542 74264758 -128820774 - L1PA14 LINE L1 -2 6159 5944 8608 195 31 21 chr5 74264758 74265768 -128819764 - L1PA15 LINE L1 -3175 2990 1828 2248 97 3 3 chr5 74265769 74266059 -128819473 + AluY SINE Alu 1 290 -21 240 93 0 23 chr5 74266061 74266104 -128819428 - L1PA15 LINE L1 -4305 1841 1800 481 317 7 0 chr5 74266385 74266527 -128819005 - L2 LINE L2 -2 3311 3169 263 286 95 19 chr5 74266813 74266918 -128818614 - MIR3 SINE MIR -15 193 81 446 301 10 25 chr5 74267208 74267411 -128818121 - MLT1I LTR MaLR -200 209 10 228 269 192 0 chr5 74270315 74270393 -128815139 + MIR3 SINE MIR 87 179 -29 408 20 0 0 chr5 74270510 74270559 -128814973 + (A)n Simple_repeat Simple_repeat 1 49 0 201 273 30 15 chr5 74271660 74271726 -128813806 - L2 LINE L2 -5 3308 3242 335 143 78 0 chr5 74272017 74272094 -128813438 - MLT1J2 LTR MaLR 0 450 368 430 159 44 35 chr5 74272131 74272244 -128813288 - MLT1J2 LTR MaLR -284 166 53 656 219 94 0 chr5 74272380 74272540 -128812992 - MER5A DNA MER1_type -2 187 13 337 255 142 4 chr5 74273164 74273297 -128812235 + MIR SINE MIR 39 195 -62 341 238 30 40 chr5 74273424 74273525 -128812007 + MIR SINE MIR 47 146 -116 1253 172 5 0 chr5 74274484 74274705 -128810827 - MLT1C LTR MaLR -46 421 200 241 240 0 0 chr5 74275571 74275621 -128809911 + GA-rich Low_complexity Low_complexity 3 52 0 890 265 12 28 chr5 74276382 74276635 -128808897 + MIR SINE MIR 12 260 -2 266 332 137 43 chr5 74277169 74277846 -128807686 - L2 LINE L2 -485 2829 2089 254 345 35 44 chr5 74278381 74278494 -128807038 + MIR SINE MIR 34 145 -117 669 271 136 53 chr5 74278529 74278979 -128806553 + MLT1L LTR MaLR 44 530 -85 204 283 67 0 chr5 74279033 74279093 -128806439 + MIR SINE MIR 148 211 -51 200 263 105 68 chr5 74279283 74279416 -128806116 - MIR SINE MIR -17 245 108 368 262 58 39 chr5 74279864 74280070 -128805462 + L1ME4a LINE L1 5909 6118 -3 1396 181 34 8 chr5 74280222 74280487 -128805045 + AluJb SINE Alu 12 283 -29 3201 210 67 30 chr5 74280554 74281982 -128803550 + L1ME1 LINE L1 4541 6063 -103 230 121 0 0 chr5 74281982 74282015 -128803517 + MER3 DNA MER1_type 17 49 -160 3201 210 67 30 chr5 74282015 74282118 -128803414 + L1ME1 LINE L1 6063 6161 -5 232 243 0 0 chr5 74282127 74282197 -128803335 + A-rich Low_complexity Low_complexity 1 70 0 1436 212 116 68 chr5 74282417 74282899 -128802633 + MLT1D LTR MaLR 1 505 0 627 218 114 116 chr5 74283103 74283612 -128801920 + MLT1J LTR MaLR 1 508 -3 351 299 33 2 chr5 74284851 74285001 -128800531 + MIR SINE MIR 10 166 -62 434 329 125 10 chr5 74285080 74285375 -128800157 + MER102b DNA MER1_type 10 338 -3 671 264 57 18 chr5 74285773 74285998 -128799534 + L1MC/D LINE L1 5458 5689 -2119 420 244 16 89 chr5 74286022 74286145 -128799387 + MER81 DNA DNA 1 114 0 1499 245 86 54 chr5 74286145 74286671 -128798861 - MLT1E LTR MaLR -22 571 7 396 306 157 33 chr5 74289582 74290033 -128795499 + L2 LINE L2 2340 2846 -468 235 357 45 19 chr5 74290098 74290255 -128795277 + L2 LINE L2 2862 3022 -250 257 355 123 7 chr5 74290297 74290435 -128795097 + L2 LINE L2 3118 3271 -1 1758 167 11 4 chr5 74290443 74290763 -128794769 - AluJo SINE Alu 0 322 1 798 195 37 42 chr5 74290903 74291093 -128794439 + MER53 DNA DNA 1 189 0 269 272 64 75 chr5 74292212 74292385 -128793147 + L2 LINE L2 3099 3269 -44 1689 184 51 18 chr5 74294894 74295230 -128790302 - MER7A DNA MER2_type -1 345 1 2512 153 30 25 chr5 74295392 74295823 -128789709 + Tigger2a DNA MER2_type 2 434 0 899 285 141 30 chr5 74295858 74296454 -128789078 - L1ME4a LINE L1 -150 5971 5310 918 272 134 41 chr5 74297344 74298085 -128787447 + L2 LINE L2 2501 3313 0 345 321 61 20 chr5 74298154 74298350 -128787182 + MIR SINE MIR 40 243 -19 630 315 6 0 chr5 74299340 74299518 -128786014 + MIR SINE MIR 41 219 -43 270 153 0 16 chr5 74299752 74299812 -128785720 - MLT2B2 LTR ERVL 0 515 408 468 0 0 0 chr5 74299815 74299867 -128785665 + (GAAAA)n Simple_repeat Simple_repeat 3 54 0 2573 206 65 6 chr5 74299870 74300374 -128785158 - MLT2B3 LTR ERVL -20 534 1 1898 116 125 62 chr5 74304189 74304542 -128780990 - THE1C LTR MaLR 0 375 1 12925 25 0 0 chr5 74305067 74306558 -128778974 - L1PA3 LINE L1 -917 5229 3739 8233 20 0 1 chr5 74306576 74307475 -128778057 + L1PA3 LINE L1 5254 6151 -4 1551 144 8 0 chr5 74308703 74308939 -128776593 + AluJo SINE Alu 68 305 -7 183 184 0 0 chr5 74308959 74308997 -128776535 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 284 326 80 29 chr5 74310158 74310296 -128775236 + MIR SINE MIR 48 192 -70 246 62 0 0 chr5 74310945 74310977 -128774555 + (CA)n Simple_repeat Simple_repeat 2 33 0 435 38 0 0 chr5 74311636 74311689 -128773843 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 213 154 0 0 chr5 74312211 74312250 -128773282 + (CA)n Simple_repeat Simple_repeat 2 40 0 1221 200 14 5 chr5 74313043 74313263 -128772269 + MER58A DNA MER1_type 3 224 0 258 206 0 0 chr5 74313594 74313662 -128771870 + (CA)n Simple_repeat Simple_repeat 2 69 0 2446 51 3 32 chr5 74314102 74314413 -128771119 - AluY SINE Alu -9 302 1 389 274 111 42 chr5 74314437 74314627 -128770905 - LTR16C LTR ERVL 0 491 289 1150 217 117 35 chr5 74316365 74316766 -128768766 - Charlie4a DNA MER1_type -8 500 67 349 203 97 62 chr5 74317150 74317271 -128768261 + MIR SINE MIR 81 196 -63 401 233 62 75 chr5 74317292 74317332 -128768200 - MER112 DNA MER1_type -37 223 184 2254 104 3 0 chr5 74317332 74317630 -128767902 - AluSq SINE Alu -14 299 1 401 233 62 75 chr5 74317630 74317735 -128767797 - MER112 DNA MER1_type -76 184 80 894 240 53 0 chr5 74318075 74318282 -128767250 + MIR SINE MIR 40 258 -4 622 267 124 60 chr5 74319303 74319753 -128765779 - L1MC4 LINE L1 -42 8000 7522 789 310 127 21 chr5 74319827 74320309 -128765223 + L2 LINE L2 2748 3304 -9 222 293 96 92 chr5 74320800 74321049 -128764483 + L2 LINE L2 2809 3058 -214 225 65 0 0 chr5 74321565 74321596 -128763936 + (TG)n Simple_repeat Simple_repeat 1 31 0 256 61 82 0 chr5 74321596 74321645 -128763887 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 181 326 0 0 chr5 74322749 74322792 -128762740 - L2 LINE L2 -93 3179 3137 200 163 0 41 chr5 74323144 74323193 -128762339 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 5573 74 13 6 chr5 74323860 74324546 -128760986 - LTR8 LTR ERV1 0 691 1 254 253 53 32 chr5 74324679 74324774 -128760758 + MIR SINE MIR 125 221 -41 293 262 160 27 chr5 74325220 74325407 -128760125 + MIR SINE MIR 51 262 0 1984 252 68 69 chr5 74325550 74326454 -128759078 + L1M4 LINE L1 3208 4110 -2036 213 327 28 47 chr5 74326702 74326809 -128758723 - MIR3 SINE MIR -91 117 13 23538 61 1 0 chr5 74327012 74329927 -128755605 + L1PA4 LINE L1 4 2919 -3227 14269 31 6 0 chr5 74329931 74332615 -128752917 + L1PA4 LINE L1 3466 6163 0 180 0 0 0 chr5 74332891 74332911 -128752621 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 189 107 0 0 chr5 74332910 74332938 -128752594 + (CA)n Simple_repeat Simple_repeat 1 28 0 2314 101 13 0 chr5 74333108 74333416 -128752116 - AluSx SINE Alu 0 312 1 1188 168 77 77 chr5 74334920 74335206 -128750326 - AluJo SINE Alu -16 296 11 1792 109 0 109 chr5 74336050 74336372 -128749160 + AluSc SINE Alu 1 287 -22 2160 125 13 0 chr5 74336808 74337113 -128748419 - AluSx SINE Alu -3 309 1 2999 150 27 29 chr5 74337547 74337785 -128747747 - LTR45 LTR ERV1 0 525 288 2417 36 7 7 chr5 74337785 74338064 -128747468 + AluY SINE Alu 18 296 -15 2999 150 27 29 chr5 74338064 74338351 -128747181 - LTR45 LTR ERV1 -237 288 1 232 296 83 15 chr5 74338472 74338604 -128746928 - Charlie8 DNA MER1_type -2276 141 1 195 338 193 13 chr5 74339300 74339528 -128746004 + L2 LINE L2 2709 2977 -337 318 191 0 0 chr5 74340559 74340622 -128744910 + MIR SINE MIR 189 251 -11 1308 253 81 52 chr5 74342560 74343414 -128742118 + L2 LINE L2 2427 3291 -22 22 0 0 30 chr5 74343446 74343463 -128742069 + AT_rich Low_complexity Low_complexity 1 18 -14 2245 73 0 17 chr5 74343463 74343763 -128741769 + AluY SINE Alu 1 295 -16 22 0 0 30 chr5 74343763 74343778 -128741754 + AT_rich Low_complexity Low_complexity 18 32 0 22 0 0 0 chr5 74343831 74343853 -128741679 + AT_rich Low_complexity Low_complexity 1 22 0 410 322 16 8 chr5 74343856 74343977 -128741555 - L2 LINE L2 -15 3257 3136 2428 91 0 0 chr5 74344045 74344354 -128741178 + AluSg1 SINE Alu 1 309 0 918 226 36 85 chr5 74344597 74344902 -128740630 + MLT1D LTR MaLR 1 290 -215 1156 221 16 27 chr5 74344902 74345160 -128740372 + MLT2B1 LTR ERVL 1 255 -265 336 71 0 0 chr5 74345175 74345217 -128740315 + MLT2B2 LTR ERVL 474 515 0 973 230 14 5 chr5 74345218 74345435 -128740097 + MLT1D LTR MaLR 287 505 0 2219 119 0 10 chr5 74345498 74345808 -128739724 + AluSx SINE Alu 1 307 -5 2406 58 3 7 chr5 74345815 74346107 -128739425 + AluY SINE Alu 1 291 -20 206 271 271 26 chr5 74346131 74346437 -128739095 - L2 LINE L2 -955 2359 1979 548 239 0 38 chr5 74346736 74346832 -128738700 + MER5B DNA MER1_type 2 91 -87 2375 65 0 17 chr5 74346832 74347124 -128738408 - AluY SINE Alu -14 297 11 548 239 0 38 chr5 74347124 74347186 -128738346 + MER5B DNA MER1_type 91 154 -24 285 333 49 0 chr5 74347535 74347637 -128737895 - L2 LINE L2 -43 3229 3123 413 153 94 0 chr5 74348191 74348276 -128737256 + Charlie5 DNA MER1_type 30 122 -2490 1269 156 23 43 chr5 74348282 74348584 -128736948 + Charlie5 DNA MER1_type 2237 2532 -80 375 150 88 12 chr5 74349187 74349267 -128736265 + Charlie5 DNA MER1_type 2500 2585 -27 500 242 159 0 chr5 74349576 74349758 -128735774 + MIR SINE MIR 31 241 -21 339 299 35 7 chr5 74353008 74353152 -128732380 + MIR SINE MIR 20 167 -95 913 54 0 0 chr5 74353152 74353264 -128732268 + AluY SINE Alu 199 310 -1 208 259 12 49 chr5 74353266 74353347 -128732185 + MIR SINE MIR 157 234 -28 665 192 17 8 chr5 74353494 74353614 -128731918 + FLAM_A SINE Alu 1 121 -12 1835 182 0 0 chr5 74353640 74353936 -128731596 - AluJb SINE Alu -16 296 1 30 27 0 0 chr5 74353938 74353975 -128731557 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 74354483 74354519 -128731013 + AT_rich Low_complexity Low_complexity 1 36 0 2209 118 0 3 chr5 74355276 74355600 -128729932 + AluSq SINE Alu 1 313 0 1499 263 24 42 chr5 74355685 74356237 -128729295 + MER34 LTR ERV1 1 542 0 2153 130 3 0 chr5 74356519 74356827 -128728705 + AluSx SINE Alu 1 309 -3 389 279 88 14 chr5 74357805 74357952 -128727580 - MIR3 SINE MIR -5 203 46 465 261 239 8 chr5 74358027 74358261 -128727271 + L3 LINE CR1 1184 1471 -106 471 248 14 48 chr5 74358824 74358969 -128726563 - MIR SINE MIR -50 212 73 614 263 20 68 chr5 74359326 74359577 -128725955 + MIR SINE MIR 23 261 -1 240 111 0 0 chr5 74359609 74359645 -128725887 + (TGG)n Simple_repeat Simple_repeat 2 37 0 198 0 0 0 chr5 74360518 74360540 -128724992 + (T)n Simple_repeat Simple_repeat 1 22 0 253 139 23 0 chr5 74361785 74361828 -128723704 - MLT1B LTR MaLR 0 390 347 2068 135 0 25 chr5 74361828 74362147 -128723385 + AluSx SINE Alu 1 311 -1 2073 136 0 58 chr5 74362165 74362547 -128722985 - MLT1B LTR MaLR -30 360 1 2605 189 92 58 chr5 74362616 74363319 -128722213 - LTR8A LTR ERV1 0 727 1 2174 179 65 19 chr5 74364147 74364560 -128720972 - MER101 LTR ERV1 0 474 43 1912 137 98 22 chr5 74364560 74364919 -128720613 + MSTA LTR MaLR 1 386 -42 2451 75 10 0 chr5 74364928 74365236 -128720296 - AluY SINE Alu 0 311 1 283 271 53 67 chr5 74365239 74365464 -128720068 - L1M4 LINE L1 -981 5165 4944 192 40 0 0 chr5 74365577 74365602 -128719930 + (TC)n Simple_repeat Simple_repeat 2 26 0 290 276 204 13 chr5 74365990 74366142 -128719390 - MIR SINE MIR -51 211 31 1693 212 65 12 chr5 74367105 74367534 -128717998 + L1MC4 LINE L1 7433 7884 -158 1769 186 43 50 chr5 74368951 74369160 -128716372 - MSTD LTR MaLR 0 396 190 1961 101 4 0 chr5 74369160 74369417 -128716115 - AluSg SINE Alu -14 296 39 1769 186 43 50 chr5 74369417 74369606 -128715926 - MSTD LTR MaLR -206 190 1 596 281 63 106 chr5 74370102 74370469 -128715063 - L1MC5 LINE L1 -142 7900 7589 234 0 0 0 chr5 74370469 74370495 -128715037 + (CA)n Simple_repeat Simple_repeat 1 26 0 596 281 63 106 chr5 74370495 74370699 -128714833 - L1MC5 LINE L1 -453 7589 7378 1078 248 44 16 chr5 74370957 74371275 -128714257 - L1MC5 LINE L1 -1898 5910 5584 366 23 0 0 chr5 74372012 74372055 -128713477 + (TG)n Simple_repeat Simple_repeat 2 44 0 270 0 0 0 chr5 74372251 74372281 -128713251 + (TG)n Simple_repeat Simple_repeat 1 30 0 205 259 35 0 chr5 74372314 74372372 -128713160 - MIR SINE MIR -122 140 81 413 284 166 29 chr5 74375953 74376266 -128709266 + L2 LINE L2 2932 3287 -26 291 54 0 0 chr5 74376284 74376321 -128709211 + (TG)n Simple_repeat Simple_repeat 2 38 0 2373 86 0 0 chr5 74376335 74376627 -128708905 - AluSx SINE Alu -20 292 1 248 286 33 22 chr5 74376758 74376849 -128708683 - MER5B DNA MER1_type -24 154 63 267 294 20 20 chr5 74377989 74378129 -128707403 - MER5A DNA MER1_type -23 165 16 437 297 143 34 chr5 74378780 74379341 -128706191 + L1ME1 LINE L1 5370 5987 -134 2018 124 18 0 chr5 74379341 74379623 -128705909 - AluSc SINE Alu -22 287 1 437 297 143 34 chr5 74379623 74379651 -128705881 + L1ME1 LINE L1 5987 6011 -110 2051 204 64 7 chr5 74380030 74380466 -128705066 + LOR1b LTR ERV1 1 461 0 319 327 79 25 chr5 74382057 74382259 -128703273 + MIR SINE MIR 20 232 -30 288 303 14 76 chr5 74382507 74382652 -128702880 - MER5A DNA MER1_type -25 164 29 494 134 0 24 chr5 74382763 74382845 -128702687 - MER5A DNA MER1_type -101 88 9 336 197 77 94 chr5 74382973 74383090 -128702442 - MER5B DNA MER1_type -3 175 61 265 244 93 35 chr5 74383099 74383185 -128702347 + MER5A DNA MER1_type 16 106 -83 1405 12 49 0 chr5 74383466 74383628 -128701904 - L1PA3 LINE L1 0 6155 5986 800 26 35 0 chr5 74383729 74383843 -128701689 - L1P LINE L1 -738 5417 5300 1979 37 8 0 chr5 74383843 74384086 -128701446 + L1P LINE L1 5053 5297 -849 552 144 96 19 chr5 74384160 74384264 -128701268 + FLAM_A SINE Alu 12 123 -19 406 358 112 9 chr5 74384873 74385088 -128700444 + MIR SINE MIR 12 248 -14 2170 115 82 28 chr5 74385137 74385493 -128700039 - THE1C LTR MaLR 0 375 1 555 296 45 5 chr5 74385754 74385953 -128699579 - L2 LINE L2 -527 2787 2581 216 0 0 0 chr5 74386028 74386052 -128699480 + (T)n Simple_repeat Simple_repeat 1 24 0 1645 188 16 16 chr5 74386783 74387087 -128698445 - AluJo SINE Alu -8 304 1 252 0 0 0 chr5 74389567 74389595 -128695937 + (T)n Simple_repeat Simple_repeat 1 28 0 200 35 35 0 chr5 74390614 74390643 -128694889 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 1372 252 57 16 chr5 74395101 74395589 -128689943 - HAL1 LINE L1 -4 2503 1996 283 292 148 38 chr5 74396596 74396805 -128688727 + MIR SINE MIR 18 249 -13 23 0 0 0 chr5 74396942 74396965 -128688567 + AT_rich Low_complexity Low_complexity 1 23 0 659 255 59 39 chr5 74397488 74397794 -128687738 - L1ME4a LINE L1 -56 6065 5754 2244 118 3 0 chr5 74397801 74398105 -128687427 - AluSp SINE Alu -8 305 1 25 0 0 0 chr5 74398255 74398280 -128687252 + AT_rich Low_complexity Low_complexity 1 25 0 990 157 7 0 chr5 74398280 74398433 -128687099 - AluJo SINE Alu -23 289 136 188 175 82 155 chr5 74399043 74399140 -128686392 - MIR SINE MIR -110 152 63 490 295 30 47 chr5 74400516 74400750 -128684782 + MIR SINE MIR 12 241 -21 2347 90 0 0 chr5 74400779 74401078 -128684454 - AluSg1 SINE Alu -10 299 1 1965 154 3 6 chr5 74404789 74405101 -128680431 + AluJb SINE Alu 1 311 -1 1987 167 28 4 chr5 74405327 74405679 -128679853 + MLT1A1 LTR MaLR 1 504 -1 1077 176 39 0 chr5 74411641 74411823 -128673709 + MER5A DNA MER1_type 1 189 0 276 53 0 0 chr5 74412169 74412207 -128673325 + (TG)n Simple_repeat Simple_repeat 2 39 0 773 181 0 8 chr5 74413391 74413524 -128672008 - AluJo SINE Alu -169 133 2 347 242 94 40 chr5 74417051 74417200 -128668332 - MIR SINE MIR -72 190 34 836 151 0 0 chr5 74417788 74417907 -128667625 + Tigger4(Zombi) DNA MER2_type 1 119 -2612 2047 131 0 3 chr5 74417927 74418218 -128667314 + AluSx SINE Alu 1 290 -22 1172 140 21 0 chr5 74418257 74418443 -128667089 + Tigger4(Zombi) DNA MER2_type 1919 2108 -623 498 281 132 12 chr5 74418452 74418619 -128666913 - MIR SINE MIR -74 188 2 1015 220 57 0 chr5 74418751 74418960 -128666572 - MER58A DNA MER1_type -3 221 1 532 236 172 6 chr5 74420132 74420289 -128665243 + MER5A DNA MER1_type 6 188 -1 261 0 0 0 chr5 74420610 74420639 -128664893 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 331 350 78 9 chr5 74423956 74424173 -128661359 + L1M4 LINE L1 4877 5108 -1038 1305 45 0 13 chr5 74424323 74424477 -128661055 + L1PA7 LINE L1 5992 6143 -11 804 288 59 34 chr5 74425154 74425390 -128660142 + MIR SINE MIR 21 262 0 316 366 93 6 chr5 74425439 74425611 -128659921 + MIR3 SINE MIR 17 203 -5 2197 115 3 16 chr5 74426910 74427222 -128658310 - AluSx SINE Alu -2 310 3 12443 80 10 1 chr5 74429057 74431410 -128654122 + L1PA7 LINE L1 3782 6154 0 348 246 92 23 chr5 74433104 74433234 -128652298 + MIR SINE MIR 110 248 -14 541 97 0 97 chr5 74434701 74434815 -128650717 + FRAM SINE Alu 72 174 -2 1380 137 32 0 chr5 74434866 74435085 -128650447 - MER30 DNA MER1_type -4 226 1 27 73 0 0 chr5 74435187 74435242 -128650290 + AT_rich Low_complexity Low_complexity 1 55 0 290 309 142 25 chr5 74436244 74436603 -128648929 + L2 LINE L2 421 821 -2493 24 32 0 0 chr5 74436676 74436707 -128648825 + AT_rich Low_complexity Low_complexity 1 31 0 223 293 135 70 chr5 74436777 74436992 -128648540 + L2 LINE L2 2126 2354 -960 419 242 298 5 chr5 74437013 74437211 -128648321 - MIR SINE MIR -3 259 4 223 322 13 53 chr5 74437304 74437456 -128648076 + L2 LINE L2 2600 2745 -569 438 245 193 19 chr5 74438481 74438693 -128646839 + MIR SINE MIR 11 259 -3 254 228 101 0 chr5 74438964 74439043 -128646489 + L1ME4a LINE L1 6012 6098 -23 57 28 0 0 chr5 74439085 74439156 -128646376 + AT_rich Low_complexity Low_complexity 1 71 0 522 297 45 27 chr5 74439524 74439746 -128645786 - MIR SINE MIR -21 241 16 1859 119 0 0 chr5 74439829 74440082 -128645450 - AluSx SINE Alu -13 299 47 2201 120 0 0 chr5 74440156 74440481 -128645051 + AluSx SINE Alu 1 325 0 22 35 0 0 chr5 74441549 74441578 -128643954 + AT_rich Low_complexity Low_complexity 1 29 0 2398 90 0 0 chr5 74441596 74441896 -128643636 - AluSg SINE Alu -10 300 1 3628 218 55 17 chr5 74443288 74443323 -128642209 + MER21B LTR ERV1 1 33 -830 2619 46 0 3 chr5 74443323 74443630 -128641902 - AluY SINE Alu -5 306 1 3628 218 55 17 chr5 74443630 74444375 -128641157 + MER21B LTR ERV1 33 811 -52 236 30 30 0 chr5 74445365 74445398 -128640134 + (TATG)n Simple_repeat Simple_repeat 2 35 0 2261 111 0 0 chr5 74445623 74445920 -128639612 - AluSx SINE Alu -15 297 1 1489 144 173 7 chr5 74447112 74447418 -128638114 - MER46B DNA MER2_type -3 233 2 29 47 0 0 chr5 74447487 74447530 -128638002 + AT_rich Low_complexity Low_complexity 1 43 0 461 342 111 13 chr5 74449991 74450587 -128634945 - L2 LINE L2 -608 2706 2053 356 221 186 18 chr5 74450722 74450835 -128634697 - L2 LINE L2 -3 3310 3179 337 304 61 0 chr5 74450831 74450946 -128634586 + MER5C DNA MER1_type 10 131 -193 * 256 264 8 72 chr5 74450993 74451118 -128634414 + MER5C DNA MER1_type 208 324 0 408 161 0 46 chr5 74452445 74452532 -128633000 + L1MC1 LINE L1 6052 6134 -199 427 123 0 0 chr5 74452562 74452627 -128632905 + L1MC1 LINE L1 6252 6316 -17 1124 269 89 25 chr5 74455138 74455544 -128629988 + LTR16A LTR ERVL 16 447 -3 288 299 110 60 chr5 74456850 74457168 -128628364 - MARNA DNA Mariner -213 373 40 316 328 55 25 chr5 74457206 74457441 -128628091 + L1M4 LINE L1 2799 3040 -3106 791 256 101 4 chr5 74457602 74457879 -128627653 + MER46C DNA MER2_type 4 307 -31 404 284 174 15 chr5 74457938 74458139 -128627393 + MARNA DNA Mariner 345 577 -9 499 311 7 7 chr5 74459244 74459395 -128626137 + MIR SINE MIR 98 248 -14 329 130 21 109 chr5 74466184 74466376 -128619156 + G-rich Low_complexity Low_complexity 3 177 0 22 0 0 0 chr5 74468475 74468497 -128617035 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 74468636 74468665 -128616867 + AT_rich Low_complexity Low_complexity 1 29 0 203 105 53 0 chr5 74468900 74468938 -128616594 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 810 278 110 29 chr5 74471218 74471564 -128613968 - L2 LINE L2 -583 2731 2358 277 213 33 0 chr5 74473665 74473726 -128611806 + MER5B DNA MER1_type 20 82 -96 2494 207 55 51 chr5 74473741 74474229 -128611303 - L1MC4 LINE L1 0 8042 7548 2189 81 49 0 chr5 74474229 74474514 -128611018 + AluSc SINE Alu 1 299 -10 2494 207 55 51 chr5 74474514 74474765 -128610767 - L1MC4 LINE L1 -493 7549 7300 360 134 15 0 chr5 74474952 74475019 -128610513 - L1PB4 LINE L1 -5 6151 6084 267 86 0 0 chr5 74475039 74475074 -128610458 - MER5B DNA MER1_type -140 38 4 24 0 0 0 chr5 74475536 74475560 -128609972 + AT_rich Low_complexity Low_complexity 1 24 0 416 147 32 13 chr5 74475566 74475723 -128609809 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 26 0 0 0 chr5 74475909 74475935 -128609597 + AT_rich Low_complexity Low_complexity 1 26 0 413 353 173 10 chr5 74477304 74477698 -128607834 - L1MC4a LINE L1 -1902 5906 5449 316 300 0 0 chr5 74477726 74477816 -128607716 + L1MC4 LINE L1 6614 6703 -1339 539 159 17 0 chr5 74477816 74478049 -128607483 + (TA)n Simple_repeat Simple_repeat 1 237 0 712 89 122 0 chr5 74478049 74478172 -128607360 - L1MA9 LINE L1 -2 6310 6173 226 207 35 0 chr5 74478194 74478252 -128607280 - L1MC4a LINE L1 -2400 5408 5349 365 301 99 46 chr5 74478365 74478530 -128607002 - L1MC4a LINE L1 -924 5222 5067 2144 106 6 13 chr5 74478530 74478841 -128606691 - AluSq SINE Alu -1 312 4 365 301 99 46 chr5 74478841 74478977 -128606555 - L1MC4a LINE L1 -1079 5067 4905 780 186 34 34 chr5 74479265 74479442 -128606090 + MER5B DNA MER1_type 1 177 -1 386 267 73 24 chr5 74479486 74479651 -128605881 - MER5B DNA MER1_type -1 177 5 737 237 10 41 chr5 74479658 74479852 -128605680 - MER5A DNA MER1_type 0 189 2 186 327 124 65 chr5 74480078 74480522 -128605010 - L2 LINE L2 -824 2490 2021 28 29 0 0 chr5 74480790 74480825 -128604707 + AT_rich Low_complexity Low_complexity 1 35 0 1874 159 0 16 chr5 74481186 74481500 -128604032 + AluJb SINE Alu 1 309 -3 1179 283 91 24 chr5 74481885 74482746 -128602786 - L1ME4a LINE L1 -122 5999 5083 379 273 14 56 chr5 74483125 74483268 -128602264 + LTR67 LTR ERVL 1 137 -420 461 293 15 35 chr5 74483426 74483624 -128601908 + LTR67 LTR ERVL 350 543 -14 303 291 171 17 chr5 74483947 74484415 -128601117 - L1ME4a LINE L1 -1799 4347 3808 2119 109 0 23 chr5 74484889 74485191 -128600341 - AluSx SINE Alu -17 295 1 189 0 0 0 chr5 74485384 74485405 -128600127 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 342 0 0 0 chr5 74486742 74486780 -128598752 + (CA)n Simple_repeat Simple_repeat 2 39 0 225 0 0 0 chr5 74487349 74487374 -128598158 + (TA)n Simple_repeat Simple_repeat 2 26 0 262 313 88 0 chr5 74487374 74487454 -128598078 - MIR SINE MIR -55 153 67 2131 127 21 29 chr5 74488050 74488428 -128597104 + THE1C LTR MaLR 1 375 0 336 307 55 39 chr5 74489275 74489447 -128596085 - MIR3 SINE MIR -52 156 4 575 239 36 99 chr5 74489937 74490380 -128595152 + L1ME4a LINE L1 5651 6065 -56 254 219 85 0 chr5 74490411 74490493 -128595039 + L1ME4a LINE L1 6027 6115 -6 855 322 77 26 chr5 74492335 74492879 -128592653 + L2 LINE L2 1985 2556 -758 2150 90 14 3 chr5 74494254 74494542 -128590990 - AluSc SINE Alu -18 291 1 308 208 160 28 chr5 74495505 74495649 -128589883 + L1ME4a LINE L1 5954 6116 -5 2150 68 8 0 chr5 74495920 74496186 -128589346 + AluY SINE Alu 36 303 -8 1944 204 106 39 chr5 74497194 74497781 -128587751 + MLT1E2 LTR MaLR 1 626 0 450 303 72 66 chr5 74498002 74498444 -128587088 - L1MC4a LINE L1 -1928 5880 5436 1403 195 23 0 chr5 74498447 74498703 -128586829 - AluJo SINE Alu -50 262 1 21 0 0 0 chr5 74498705 74498726 -128586806 + AT_rich Low_complexity Low_complexity 1 21 0 255 125 0 0 chr5 74499030 74499070 -128586462 + (TTTTC)n Simple_repeat Simple_repeat 4 43 0 1757 161 3 23 chr5 74499664 74499963 -128585569 + AluSx SINE Alu 6 298 -14 23 33 0 0 chr5 74500559 74500589 -128584943 + AT_rich Low_complexity Low_complexity 1 30 0 229 50 25 25 chr5 74500622 74500662 -128584870 + (TA)n Simple_repeat Simple_repeat 2 41 0 525 260 70 25 chr5 74500692 74500934 -128584598 - L1ME3 LINE L1 -230 5932 5680 237 267 0 0 chr5 74507583 74507673 -128577859 - L1MC4 LINE L1 -1339 6703 6614 * 252 237 21 0 chr5 74507602 74507695 -128577837 + L1MC4 LINE L1 6615 6709 -1333 759 224 20 78 chr5 74507817 74508269 -128577263 + LTR37B LTR ERV1 35 464 -4 230 206 27 55 chr5 74508309 74508382 -128577150 - L1ME LINE L1 -280 5884 5814 743 276 197 14 chr5 74508941 74509494 -128576038 - L2 LINE L2 0 3313 2660 1673 163 50 0 chr5 74510405 74510628 -128574904 - MER7A DNA MER2_type -2692 346 105 2533 112 53 7 chr5 74510628 74511046 -128574486 + LTR23 LTR ERV1 1 437 0 1673 163 50 0 chr5 74511046 74511123 -128574409 - MER7A DNA MER2_type -2933 105 33 1366 189 18 21 chr5 74511861 74512146 -128573386 + AluJo SINE Alu 13 296 -16 194 292 21 31 chr5 74514383 74514479 -128571053 - MIR SINE MIR -80 128 34 481 223 18 84 chr5 74514675 74514734 -128570798 + MIR SINE MIR 106 167 -95 2159 125 3 0 chr5 74514734 74515029 -128570503 + AluSx SINE Alu 1 296 -16 481 223 18 84 chr5 74515029 74515135 -128570397 + MIR SINE MIR 167 260 -2 1011 217 0 5 chr5 74515638 74515827 -128569705 - MIR SINE MIR -74 188 1 263 93 23 0 chr5 74516657 74516700 -128568832 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 74517913 74517934 -128567598 + AT_rich Low_complexity Low_complexity 1 21 0 200 227 0 0 chr5 74518405 74518449 -128567083 + A-rich Low_complexity Low_complexity 3 46 0 21 36 0 0 chr5 74519074 74519102 -128566430 + AT_rich Low_complexity Low_complexity 1 28 0 823 160 8 0 chr5 74519418 74519549 -128565983 - FLAM_C SINE Alu -1 132 1 1708 197 34 0 chr5 74519860 74520185 -128565347 - MER2 DNA MER2_type -9 336 1 354 96 0 0 chr5 74520763 74520815 -128564717 - MER2 DNA MER2_type -161 184 133 207 0 0 0 chr5 74522925 74522948 -128562584 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 288 0 0 0 chr5 74523316 74523348 -128562184 + (CA)n Simple_repeat Simple_repeat 1 32 0 222 231 141 26 chr5 74524180 74524258 -128561274 + L2 LINE L2 3227 3313 0 184 307 45 23 chr5 74524337 74524425 -128561107 + L2 LINE L2 2376 2465 -849 29 94 0 0 chr5 74526640 74526725 -128558807 + AT_rich Low_complexity Low_complexity 1 85 0 1652 185 3 20 chr5 74527518 74527816 -128557716 - AluJb SINE Alu -18 294 2 341 323 144 35 chr5 74527820 74528312 -128557220 + L2 LINE L2 2226 2771 -543 383 306 74 8 chr5 74528636 74528757 -128556775 + L2 LINE L2 3143 3271 -1 1445 191 153 8 chr5 74531165 74531563 -128553969 + Charlie4a DNA MER1_type 20 475 -33 21 0 0 0 chr5 74531567 74531588 -128553944 + AT_rich Low_complexity Low_complexity 1 21 0 275 254 16 0 chr5 74531616 74531679 -128553853 - MIR SINE MIR -103 105 42 320 115 0 0 chr5 74531691 74531743 -128553789 - L1MA5A LINE L1 -5 6292 6241 186 143 0 0 chr5 74532159 74532194 -128553338 + (TA)n Simple_repeat Simple_repeat 2 36 0 304 292 11 0 chr5 74532260 74532349 -128553183 + L1MC4 LINE L1 6614 6703 -1339 2029 114 32 9 chr5 74532395 74532737 -128552795 + L1MB2 LINE L1 5794 6143 -28 375 321 0 7 chr5 74534347 74534484 -128551048 + L1ME4a LINE L1 5569 5704 -417 341 200 94 24 chr5 74534493 74534578 -128550954 - L2 LINE L2 -5 3267 3177 21 0 0 0 chr5 74534826 74534847 -128550685 + AT_rich Low_complexity Low_complexity 1 21 0 756 243 104 0 chr5 74535648 74535850 -128549682 - MER58A DNA MER1_type -1 223 1 193 208 62 0 chr5 74535919 74535967 -128549565 - MIR SINE MIR -73 135 85 295 328 141 0 chr5 74536686 74536814 -128548718 + MIR3 SINE MIR 36 181 -27 358 286 57 57 chr5 74537570 74537762 -128547770 + L1ME4a LINE L1 5870 6061 -60 26 0 0 0 chr5 74537805 74537831 -128547701 + AT_rich Low_complexity Low_complexity 1 26 0 1458 176 81 7 chr5 74538139 74538411 -128547121 - AluJb SINE Alu -20 292 1 266 224 143 0 chr5 74538563 74538661 -128546871 + L1MD3 LINE L1 7714 7825 -170 2148 122 16 0 chr5 74538767 74539070 -128546462 + AluSg SINE Alu 1 308 -2 394 250 80 9 chr5 74539078 74539190 -128546342 + L1ME1 LINE L1 6042 6161 -5 471 282 30 0 chr5 74540344 74540475 -128545057 + MIR SINE MIR 58 192 -70 267 345 67 8 chr5 74540587 74540706 -128544826 + L2 LINE L2 3146 3271 -1 325 266 121 17 chr5 74546184 74546357 -128539175 + L2 LINE L2 2921 3111 -202 653 283 135 9 chr5 74546998 74547228 -128538304 - MIR SINE MIR -2 260 2 207 211 0 26 chr5 74547562 74547600 -128537932 + L2 LINE L2 3219 3255 -17 1136 156 120 0 chr5 74553588 74553780 -128531752 - MER20 DNA MER1_type -4 215 1 319 278 153 37 chr5 74553807 74554023 -128531509 + MIR SINE MIR 14 254 -8 195 333 90 51 chr5 74554134 74554290 -128531242 + L2 LINE L2 3107 3268 -4 299 316 75 42 chr5 74554583 74554795 -128530737 + L3 LINE CR1 1073 1291 -286 22 0 0 0 chr5 74555177 74555199 -128530333 + AT_rich Low_complexity Low_complexity 1 22 0 2176 94 17 7 chr5 74555892 74556179 -128529353 - AluSq SINE Alu -22 291 2 219 200 20 40 chr5 74557842 74557892 -128527640 + L2 LINE L2 3178 3226 -87 359 214 165 60 chr5 74558866 74558922 -128526610 + L1ME4a LINE L1 5380 5429 -692 2209 111 23 3 chr5 74558922 74559229 -128526303 + AluSq SINE Alu 1 313 0 359 214 165 60 chr5 74559229 74559354 -128526178 + L1ME4a LINE L1 5429 5580 -541 226 255 9 9 chr5 74559395 74559501 -128526031 + (TA)n Simple_repeat Simple_repeat 2 107 0 319 249 84 80 chr5 74559628 74559731 -128525801 + L1ME4a LINE L1 5732 5833 -288 2158 202 47 32 chr5 74559731 74560225 -128525307 + MLT1D LTR MaLR 5 505 0 319 249 84 80 chr5 74560225 74560346 -128525186 + L1ME4a LINE L1 5833 5957 -164 2216 110 0 3 chr5 74560383 74560674 -128524858 - AluSq SINE Alu -23 290 1 279 54 0 0 chr5 74560756 74560793 -128524739 + (TG)n Simple_repeat Simple_repeat 2 38 0 756 232 14 0 chr5 74560793 74560935 -128524597 - FRAM SINE Alu -27 149 6 2136 114 3 3 chr5 74560971 74561269 -128524263 + AluSc SINE Alu 3 300 -9 442 292 52 73 chr5 74562656 74562848 -128522684 + MER5A DNA MER1_type 1 188 -1 539 315 66 79 chr5 74562886 74563343 -128522189 + L2 LINE L2 2808 3258 -14 1472 196 18 11 chr5 74566036 74566316 -128519216 - AluJo SINE Alu -30 282 1 609 201 67 0 chr5 74566344 74566478 -128519054 + MIR SINE MIR 74 216 -46 24 0 0 0 chr5 74566575 74566599 -128518933 + AT_rich Low_complexity Low_complexity 1 24 0 878 263 93 4 chr5 74567958 74568194 -128517338 + MIR SINE MIR 2 258 -4 454 110 27 0 chr5 74569134 74569207 -128516325 + U3 snRNA snRNA 1 75 -142 1703 174 31 0 chr5 74569757 74570050 -128515482 + AluJo SINE Alu 1 302 -10 254 138 17 0 chr5 74570050 74570108 -128515424 + (TA)n Simple_repeat Simple_repeat 2 60 0 481 147 67 227 chr5 74572725 74572920 -128512612 - MER5A DNA MER1_type 0 189 33 201 39 0 0 chr5 74572920 74572946 -128512586 + (CTG)n Simple_repeat Simple_repeat 1 26 0 481 147 67 227 chr5 74572946 74572975 -128512557 - MER5A DNA MER1_type -156 33 1 4430 121 96 107 chr5 74573743 74575167 -128510365 + pTR5 LTR ERV1 741 2438 0 428 266 93 7 chr5 74575176 74575315 -128510217 - L1ME3A LINE L1 -31 6139 5989 2343 78 0 0 chr5 74575344 74575661 -128509871 - AluY SINE Alu 0 317 1 4996 141 30 30 chr5 74575667 74576591 -128508941 - L1MA7 LINE L1 -1 6290 5367 528 146 0 0 chr5 74578887 74578976 -128506556 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 819 179 0 0 chr5 74578976 74579121 -128506411 - L1MB1 LINE L1 -32 6157 6013 557 251 127 29 chr5 74579346 74579728 -128505804 - L2 LINE L2 0 3313 2814 332 241 35 0 chr5 74579741 74579828 -128505704 - MER20 DNA MER1_type -74 145 56 499 279 156 0 chr5 74581226 74581380 -128504152 - MER5A DNA MER1_type 0 189 12 12336 228 45 55 chr5 74581574 74584408 -128501124 + L1M2a LINE L1 2 2864 -4303 1888 164 7 0 chr5 74584408 74584713 -128500819 - AluSx SINE Alu 0 307 1 12336 228 45 55 chr5 74584713 74588688 -128496844 + L1M2a LINE L1 2864 6424 -743 309 281 78 36 chr5 74588731 74588923 -128496609 + L1MA8 LINE L1 6066 6265 -26 204 255 0 0 chr5 74588974 74589021 -128496511 + T-rich Low_complexity Low_complexity 1 47 0 220 298 19 29 chr5 74589075 74589179 -128496353 - MER5B DNA MER1_type -75 103 1 229 316 66 13 chr5 74589435 74589511 -128496021 + MER5A DNA MER1_type 26 105 -84 509 273 19 62 chr5 74590526 74590735 -128494797 + L2 LINE L2 3086 3285 -28 1956 183 12 26 chr5 74590735 74591150 -128494382 - MLT1C LTR MaLR 0 467 59 209 152 0 0 chr5 74591177 74591210 -128494322 + L2 LINE L2 3279 3311 -2 617 258 134 55 chr5 74593636 74594090 -128491442 - MLT1J LTR MaLR -2 509 20 284 313 71 27 chr5 74595092 74595204 -128490328 - L2 LINE L2 0 3272 3156 450 342 65 45 chr5 74595532 74595937 -128489595 + L2 LINE L2 1463 1882 -1432 1850 168 0 16 chr5 74595937 74596252 -128489280 - AluJb SINE Alu -2 310 1 450 342 65 45 chr5 74596252 74596373 -128489159 + L2 LINE L2 1882 1999 -1315 230 86 0 0 chr5 74596782 74596817 -128488715 - L1PA10 LINE L1 -233 5898 5864 1721 89 28 4 chr5 74596817 74597064 -128488468 + L1PA10 LINE L1 5916 6168 0 678 325 88 80 chr5 74597079 74597467 -128488065 + L2 LINE L2 2137 2520 -752 2692 127 20 9 chr5 74597467 74597907 -128487625 - L1PB3 LINE L1 0 6154 5710 678 325 88 80 chr5 74597907 74598636 -128486896 + L2 LINE L2 2520 3266 -6 365 336 111 29 chr5 74599337 74599679 -128485853 - L2 LINE L2 -746 2568 2199 2229 111 0 3 chr5 74600651 74600948 -128484584 - AluSx SINE Alu -4 308 13 245 203 125 0 chr5 74601257 74601321 -128484211 - MIR SINE MIR -108 154 83 2054 277 137 16 chr5 74602023 74602814 -128482718 + L2 LINE L2 2055 2940 -374 238 241 241 0 chr5 74602793 74602876 -128482656 - MER5A DNA MER1_type -27 162 60 * 341 252 92 8 chr5 74602974 74603093 -128482439 + MER63A DNA MER1_type 52 180 -30 365 282 128 7 chr5 74603168 74603317 -128482215 - MIR SINE MIR -13 249 83 243 88 0 0 chr5 74604383 74604417 -128481115 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr5 74604589 74604618 -128480914 + (TG)n Simple_repeat Simple_repeat 2 30 0 244 377 47 9 chr5 74606122 74606228 -128479304 + L2 LINE L2 3117 3226 -46 2327 138 69 19 chr5 74607456 74607933 -128477599 - L1PA16 LINE L1 -9 6157 5657 792 179 71 0 chr5 74607939 74607979 -128477553 - L1 LINE L1 -796 5350 5314 198 0 0 0 chr5 74607979 74608001 -128477531 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 792 179 71 0 chr5 74608001 74608144 -128477388 - L1 LINE L1 -832 5314 5154 1524 182 39 11 chr5 74608162 74608442 -128477090 - AluJo SINE Alu -20 292 5 359 290 97 43 chr5 74608878 74609064 -128476468 + MIR SINE MIR 5 200 -62 246 105 0 0 chr5 74609234 74609272 -128476260 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 261 139 0 0 chr5 74609552 74609595 -128475937 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 139 0 0 chr5 74609595 74609631 -128475901 + (GGGAGA)n Simple_repeat Simple_repeat 3 38 0 1143 240 70 50 chr5 74609837 74610292 -128475240 + MLT2C2 LTR ERVL 1 464 0 562 311 25 6 chr5 74610446 74610607 -128474925 + MER5A DNA MER1_type 26 189 0 955 202 54 5 chr5 74612096 74612299 -128473233 + MER58C DNA MER1_type 1 213 -2 287 188 75 0 chr5 74612445 74612525 -128473007 - L1MA6 LINE L1 -265 6035 5950 1222 165 14 0 chr5 74612525 74612743 -128472789 + L1MA6 LINE L1 6063 6283 -17 25 0 0 0 chr5 74612757 74612782 -128472750 + AT_rich Low_complexity Low_complexity 1 25 0 386 238 87 40 chr5 74613461 74613587 -128471945 - MIR SINE MIR -48 214 83 387 276 16 30 chr5 74614138 74614285 -128471247 - MIR3 SINE MIR -2 206 61 521 301 41 29 chr5 74614307 74614553 -128470979 + HERVL LTR ERVL 4190 4438 -1216 838 361 19 15 chr5 74614706 74615290 -128470242 + HERVL LTR ERVL 4531 5116 -648 1526 212 55 70 chr5 74615589 74616060 -128469472 + LTR16B LTR ERVL 1 464 0 515 269 20 20 chr5 74616486 74616635 -128468897 - MIR SINE MIR -69 193 45 208 343 43 0 chr5 74616635 74616705 -128468827 - L2 LINE L2 -1544 1770 1698 21 0 0 0 chr5 74616770 74616791 -128468741 + AT_rich Low_complexity Low_complexity 1 21 0 281 226 51 102 chr5 74617946 74618083 -128467449 - MIR SINE MIR -63 145 16 367 315 74 30 chr5 74618110 74618313 -128467219 + MIR SINE MIR 20 231 -31 385 245 181 32 chr5 74619988 74620143 -128465389 - MER5A DNA MER1_type 0 189 12 30 59 0 0 chr5 74622782 74622833 -128462699 + AT_rich Low_complexity Low_complexity 1 51 0 1085 343 128 15 chr5 74623716 74624791 -128460741 + L2 LINE L2 1858 3055 -217 286 266 85 0 chr5 74625069 74625163 -128460369 - MER63A DNA MER1_type 0 104 3 303 234 168 0 chr5 74625188 74625295 -128460237 - MIR SINE MIR -14 248 124 2154 48 4 15 chr5 74625354 74625623 -128459909 - AluY SINE Alu -11 300 35 907 283 68 11 chr5 74625820 74626287 -128459245 + HAL1b LINE L1 420 913 -435 415 253 78 6 chr5 74626330 74626496 -128459036 + HAL1b LINE L1 1014 1191 -157 232 257 0 29 chr5 74626601 74626671 -128458861 + (TGG)n Simple_repeat Simple_repeat 1 68 0 246 306 260 15 chr5 74626771 74626967 -128458565 + MIR SINE MIR 13 256 -6 1138 186 5 23 chr5 74627504 74627724 -128457808 + MER20 DNA MER1_type 4 219 0 21 0 0 0 chr5 74627800 74627821 -128457711 + AT_rich Low_complexity Low_complexity 1 21 0 273 119 0 0 chr5 74627839 74627881 -128457651 + (TG)n Simple_repeat Simple_repeat 2 43 0 5582 142 63 15 chr5 74627882 74628340 -128457192 - L1MA8 LINE L1 -27 6264 5829 288 0 0 0 chr5 74628340 74628372 -128457160 + (TG)n Simple_repeat Simple_repeat 2 33 0 5582 142 63 15 chr5 74628372 74629865 -128455667 - L1MA8 LINE L1 -462 5829 4223 257 149 43 0 chr5 74630005 74630052 -128455480 - L1P LINE L1 -1912 4234 4186 21 0 0 0 chr5 74631927 74631948 -128453584 + AT_rich Low_complexity Low_complexity 1 21 0 674 266 20 53 chr5 74632440 74632741 -128452791 + MLT1L LTR MaLR 28 318 -297 932 177 0 121 chr5 74632865 74633113 -128452419 - MER58A DNA MER1_type 0 224 7 255 233 23 0 chr5 74633165 74633251 -128452281 + MLT1L LTR MaLR 518 605 -10 1949 124 73 20 chr5 74633483 74633839 -128451693 + THE1C LTR MaLR 1 375 0 374 354 70 13 chr5 74636742 74636978 -128448554 + L2 LINE L2 2108 2368 -946 2377 72 0 38 chr5 74636978 74637297 -128448235 - AluY SINE Alu -4 307 1 374 354 70 13 chr5 74637297 74637376 -128448156 + L2 LINE L2 2368 2441 -873 655 246 134 54 chr5 74637558 74637835 -128447697 - L1ME1 LINE L1 -5 6230 5932 640 255 94 0 chr5 74637834 74638046 -128447486 - L1ME1 LINE L1 -1951 4264 4033 * 1510 271 81 62 chr5 74638049 74638309 -128447223 - L1ME1 LINE L1 -4461 1935 1681 2219 95 0 0 chr5 74638309 74638634 -128446898 - AluY SINE Alu 0 326 2 1510 271 81 62 chr5 74638634 74639469 -128446063 - L1ME1 LINE L1 -4715 1681 818 681 257 37 28 chr5 74639444 74639662 -128445870 - L1ME1 LINE L1 -6133 263 44 * 591 245 6 12 chr5 74640180 74640343 -128445189 - MER58C DNA MER1_type -6 209 48 505 302 58 0 chr5 74640476 74640648 -128444884 - MIR SINE MIR -3 259 78 583 242 179 9 chr5 74642596 74642819 -128442713 + MIR SINE MIR 2 262 0 383 314 93 23 chr5 74643773 74643945 -128441587 - MIR3 SINE MIR -9 199 16 219 288 189 0 chr5 74644326 74644437 -128441095 + MIR SINE MIR 124 255 -7 483 279 66 6 chr5 74644462 74644645 -128440887 - MER117 DNA MER1_type -1 196 3 192 346 0 26 chr5 74645246 74645324 -128440208 - MIR SINE MIR -186 76 1 * 255 271 114 3 chr5 74645324 74645434 -128440098 + MIR SINE MIR 21 146 -62 22 0 0 0 chr5 74645784 74645806 -128439726 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 74646053 74646096 -128439436 + AT_rich Low_complexity Low_complexity 1 43 0 1626 153 90 0 chr5 74646589 74646749 -128438783 - AluJb SINE Alu -14 298 154 234 0 0 0 chr5 74646749 74646775 -128438757 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1626 153 90 0 chr5 74646775 74646882 -128438650 - AluJb SINE Alu -158 154 7 222 118 0 0 chr5 74646891 74646925 -128438607 + (TCCCC)n Simple_repeat Simple_repeat 4 37 0 764 244 96 24 chr5 74646938 74647188 -128438344 - L2 LINE L2 -540 2774 2507 974 240 114 12 chr5 74649271 74649684 -128435848 + L1M4 LINE L1 2609 3063 -3083 2526 171 74 76 chr5 74649715 74650270 -128435262 - MLT2B3 LTR ERVL 0 554 1 288 53 0 0 chr5 74650270 74650308 -128435224 + (TG)n Simple_repeat Simple_repeat 2 39 0 2266 92 7 0 chr5 74650354 74650638 -128434894 + AluSq SINE Alu 1 286 -27 219 203 0 0 chr5 74650652 74650721 -128434811 + (TA)n Simple_repeat Simple_repeat 1 69 0 234 0 0 0 chr5 74651394 74651420 -128434112 + (T)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr5 74651622 74651648 -128433884 + AT_rich Low_complexity Low_complexity 1 26 0 208 308 138 39 chr5 74651810 74651940 -128433592 + L2 LINE L2 3167 3309 -4 27 0 0 0 chr5 74652066 74652093 -128433439 + AT_rich Low_complexity Low_complexity 1 27 0 2051 138 19 32 chr5 74652099 74652470 -128433062 - MER47A DNA MER2_type 0 366 1 1655 170 53 0 chr5 74652489 74652772 -128432760 - AluJb SINE Alu -13 299 2 220 327 119 0 chr5 74653358 74653459 -128432073 + L2 LINE L2 3201 3313 0 1820 178 8 67 chr5 74654704 74654882 -128430650 - MLT1A1 LTR MaLR 0 365 221 1648 175 0 4 chr5 74654882 74655150 -128430382 - AluJb SINE Alu -45 267 1 1820 178 8 67 chr5 74655150 74655359 -128430173 - MLT1A1 LTR MaLR -144 221 1 211 328 41 64 chr5 74656258 74656429 -128429103 + MIR SINE MIR 51 217 -45 192 291 152 0 chr5 74656659 74656738 -128428794 + L2 LINE L2 3169 3259 -13 257 275 14 0 chr5 74656797 74656866 -128428666 - MER69 DNA AcHobo -7 2519 2450 * 461 265 17 0 chr5 74656863 74656980 -128428552 - MER69 DNA AcHobo -2379 147 29 21 36 0 0 chr5 74657143 74657171 -128428361 + AT_rich Low_complexity Low_complexity 1 28 0 317 274 102 13 chr5 74658458 74658615 -128426917 - L1ME LINE L1 -341 5780 5610 1015 181 0 6 chr5 74659086 74659252 -128426280 - AluJb SINE Alu -146 166 2 636 194 0 0 chr5 74659281 74659384 -128426148 - FLAM_C SINE Alu -34 109 7 1008 109 0 0 chr5 74659502 74659639 -128425893 - AluSg/x SINE Alu -16 294 158 1402 147 97 17 chr5 74660239 74660477 -128425055 + AluJb SINE Alu 37 293 -19 6720 201 41 58 chr5 74660729 74661615 -128423917 + L1MA9 LINE L1 2971 3870 -2442 2922 117 9 9 chr5 74661615 74662043 -128423489 - MSTA LTR MaLR 0 428 1 6720 201 41 58 chr5 74662043 74662636 -128422896 + L1MA9 LINE L1 3870 4471 -1841 1361 235 7 0 chr5 74662636 74662908 -128422624 + MLT1A1 LTR MaLR 89 362 -3 6720 201 41 58 chr5 74662908 74663185 -128422347 + L1MA9 LINE L1 4471 4751 -1561 1051 220 91 89 chr5 74663185 74663580 -128421952 + MSTD LTR MaLR 1 396 0 6720 201 41 58 chr5 74663580 74664049 -128421483 + L1MA9 LINE L1 4751 5226 -1086 1560 181 16 32 chr5 74664049 74664195 -128421337 + AluSx SINE Alu 1 148 -164 1559 77 0 19 chr5 74664195 74664404 -128421128 + AluY SINE Alu 100 304 -7 1560 181 16 32 chr5 74664404 74664572 -128420960 + AluSx SINE Alu 148 310 -2 6720 201 41 58 chr5 74664572 74665375 -128420157 + L1MA9 LINE L1 5226 6124 -188 1787 134 43 31 chr5 74665375 74665726 -128419806 - L1MA9 LINE L1 0 6312 5958 6720 201 41 58 chr5 74665726 74665872 -128419660 + L1MA9 LINE L1 6124 6271 -41 1454 285 158 14 chr5 74666165 74666875 -128418657 + L2 LINE L2 2494 3309 -4 205 367 60 7 chr5 74666864 74667014 -128418518 - MIR SINE MIR -61 201 44 * 522 160 8 76 chr5 74667162 74667281 -128418251 - MLT2B1 LTR ERVL -409 111 1 198 0 0 0 chr5 74667328 74667350 -128418182 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 336 163 10 41 chr5 74667350 74667448 -128418084 + CT-rich Low_complexity Low_complexity 4 98 0 26 50 0 0 chr5 74668002 74668042 -128417490 + AT_rich Low_complexity Low_complexity 1 40 0 1614 183 7 4 chr5 74668042 74668321 -128417211 - AluJo SINE Alu -18 294 15 201 94 0 0 chr5 74668337 74668369 -128417163 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 251 342 154 20 chr5 74668877 74669026 -128416506 + MIR3 SINE MIR 17 185 -23 1371 121 78 4 chr5 74669192 74669448 -128416084 - L1MA3 LINE L1 0 6305 6031 345 43 0 0 chr5 74669864 74669910 -128415622 - MADE1 DNA Mariner 0 80 35 2438 172 18 13 chr5 74669919 74670373 -128415159 + MER65C LTR ERV1 6 461 0 715 312 36 24 chr5 74670593 74670846 -128414686 - MIR SINE MIR -1 261 6 193 262 0 0 chr5 74671488 74671530 -128414002 - MIR3 SINE MIR -23 185 144 287 49 24 0 chr5 74671958 74671999 -128413533 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1035 263 12 8 chr5 74672005 74672248 -128413284 - MIR SINE MIR -8 254 11 1760 182 7 0 chr5 74672868 74673211 -128412321 + AluJb SINE Alu 1 345 0 365 298 78 0 chr5 74675852 74675993 -128409539 + MIR SINE MIR 34 185 -77 711 329 8 4 chr5 74676058 74676292 -128409240 - MIR SINE MIR -21 241 7 3224 60 0 0 chr5 74676671 74677068 -128408464 + THE1B-int LTR MaLR 1183 1579 -1 2031 147 79 12 chr5 74677068 74677409 -128408123 + THE1B LTR MaLR 1 364 0 268 296 104 40 chr5 74677465 74677590 -128407942 + MIR SINE MIR 74 206 -56 403 346 63 30 chr5 74679896 74680133 -128405399 - MIR SINE MIR 0 262 18 327 311 36 66 chr5 74681465 74681632 -128403900 + MIR SINE MIR 52 213 -49 472 182 20 10 chr5 74683208 74683307 -128402225 - MER94 DNA DNA -34 100 1 10458 206 21 10 chr5 74684479 74686937 -128398595 - L1 LINE L1 -1125 6440 3955 1564 164 98 0 chr5 74686937 74687212 -128398320 + AluJb SINE Alu 1 302 -10 687 175 13 17 chr5 74687228 74687468 -128398064 + GA-rich Low_complexity Low_complexity 1 239 0 2248 238 63 30 chr5 74687470 74688687 -128396845 - L1 LINE L1 -3599 3966 2695 * 2306 302 16 12 chr5 74688679 74689433 -128396099 - L1 LINE L1 -6411 1155 399 324 0 0 0 chr5 74689887 74689923 -128395609 + (TG)n Simple_repeat Simple_repeat 1 36 0 250 233 0 0 chr5 74690481 74690524 -128395008 - MIR SINE MIR -56 152 110 2232 121 3 0 chr5 74690914 74691219 -128394313 + AluY SINE Alu 1 306 -5 964 215 32 79 chr5 74691650 74691966 -128393566 - L1MD2 LINE L1 -9 6350 6050 227 241 0 0 chr5 74692446 74692525 -128393007 - L1MC4 LINE L1 -1350 6692 6614 4486 185 94 89 chr5 74693469 74694993 -128390539 + Looper DNA T2_type 26 1558 0 387 294 32 20 chr5 74695126 74695262 -128390270 + MIR3 SINE MIR 33 154 -54 552 182 63 35 chr5 74695740 74695883 -128389649 - LTR45B LTR ERV1 0 489 343 757 303 26 13 chr5 74696254 74696482 -128389050 - ERVL LTR ERVL -777 4987 4757 588 352 102 12 chr5 74696525 74696849 -128388683 - ERVL LTR ERVL -966 4519 4167 1637 234 86 16 chr5 74696852 74697293 -128388239 + MLT1F1 LTR MaLR 3 474 -93 2464 160 77 7 chr5 74698386 74698843 -128386689 + LTR45B LTR ERV1 1 489 0 236 260 122 49 chr5 74699309 74699432 -128386100 - MIR3 SINE MIR -43 165 34 1198 62 0 25 chr5 74699910 74700071 -128385461 + AluY SINE Alu 146 302 -9 2489 191 19 35 chr5 74702632 74703197 -128382335 - L1M3 LINE L1 -359 5809 5254 371 200 29 29 chr5 74703208 74703313 -128382219 - L1M3 LINE L1 -855 5291 5187 991 292 24 0 chr5 74703481 74703822 -128381710 + L1ME2 LINE L1 5797 6147 -17 438 91 52 13 chr5 74703938 74704015 -128381517 - MADE1 DNA Mariner 0 80 1 313 219 18 79 chr5 74704538 74704652 -128380880 - MLT1J LTR MaLR -14 497 391 1628 164 96 45 chr5 74704892 74705269 -128380263 + MSTD LTR MaLR 1 396 0 2354 91 10 0 chr5 74705666 74705974 -128379558 - AluSq SINE Alu 0 313 3 189 0 0 0 chr5 74706118 74706139 -128379393 + (A)n Simple_repeat Simple_repeat 1 21 0 186 71 0 0 chr5 74707396 74707424 -128378108 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 21 36 0 0 chr5 74708745 74708773 -128376759 + AT_rich Low_complexity Low_complexity 1 28 0 2840 230 96 31 chr5 74708773 74708979 -128376553 - L1ME1 LINE L1 -24 6142 5951 1900 155 0 0 chr5 74708979 74709263 -128376269 - AluSx SINE Alu -21 291 8 2840 230 96 31 chr5 74709263 74709860 -128375672 - L1ME1 LINE L1 -215 5951 5395 1840 146 56 24 chr5 74709860 74710238 -128375294 - L1MA7 LINE L1 -1 6290 5901 2840 230 96 31 chr5 74710238 74711210 -128374322 - L1ME1 LINE L1 -771 5395 4269 480 133 0 0 chr5 74711849 74711932 -128373600 + (TCCC)n Simple_repeat Simple_repeat 3 85 0 332 256 92 43 chr5 74712783 74712947 -128372585 - L2 LINE L2 -1 3312 3141 535 289 96 14 chr5 74712959 74713177 -128372355 - MIR SINE MIR -11 251 16 234 303 129 23 chr5 74713459 74713984 -128371548 - L1ME1 LINE L1 -3220 2926 2346 2013 140 0 37 chr5 74716958 74717279 -128368253 - AluSx SINE Alu -3 309 1 1054 234 67 20 chr5 74717723 74718022 -128367510 - L1PB4 LINE L1 0 6156 5844 198 318 76 0 chr5 74718206 74718272 -128367260 - L2 LINE L2 -16 3256 3186 201 274 20 0 chr5 74719247 74719298 -128366234 + (CA)n Simple_repeat Simple_repeat 2 53 0 1671 140 70 8 chr5 74720103 74720459 -128365073 + L1PA16 LINE L1 5749 6163 -3 903 236 85 20 chr5 74721409 74721649 -128363883 - MLT1G1 LTR MaLR 0 595 340 765 264 78 47 chr5 74721649 74722119 -128363413 + MLT1G1 LTR MaLR 1 526 -69 635 239 151 0 chr5 74722935 74723094 -128362438 - MER5A DNA MER1_type -6 183 1 3448 38 5 0 chr5 74723694 74724113 -128361419 + L1PA5 LINE L1 5733 6153 -1 244 246 114 17 chr5 74724363 74724538 -128360994 - L1ME4a LINE L1 0 6121 5930 5471 140 16 18 chr5 74724558 74725745 -128359787 + L1MA6 LINE L1 4411 5598 -702 2229 95 23 3 chr5 74725745 74726049 -128359483 + AluSq SINE Alu 1 310 -3 2096 104 0 67 chr5 74726055 74726383 -128359149 + AluSc SINE Alu 1 306 -3 5471 140 16 18 chr5 74726383 74726613 -128358919 + L1MA6 LINE L1 5603 5837 -463 247 250 26 13 chr5 74726711 74726787 -128358745 - MIR SINE MIR -2 260 184 302 61 143 0 chr5 74726791 74726840 -128358692 - L1PA16 LINE L1 -10 6156 6101 230 104 0 21 chr5 74726986 74727034 -128358498 + (AATTG)n Simple_repeat Simple_repeat 2 48 0 442 272 29 8 chr5 74727060 74727230 -128358302 + L1MA10 LINE L1 5990 6326 -8 513 237 103 31 chr5 74728188 74728270 -128357262 - L1ME4a LINE L1 -347 5774 5699 360 0 0 0 chr5 74728270 74728310 -128357222 + (TG)n Simple_repeat Simple_repeat 1 40 0 513 237 103 31 chr5 74728310 74728421 -128357111 - L1ME4a LINE L1 -422 5699 5567 242 292 161 22 chr5 74728430 74728567 -128356965 - L2 LINE L2 -1391 1923 1768 917 251 54 17 chr5 74728574 74728813 -128356719 + LTR16A LTR ERVL 197 444 -6 1634 227 132 59 chr5 74728820 74729601 -128355931 + L1MEc LINE L1 1587 2384 -3831 305 241 37 56 chr5 74729658 74729820 -128355712 + GA-rich Low_complexity Low_complexity 3 161 0 2790 68 3 3 chr5 74729911 74730266 -128355266 - THE1A LTR MaLR 0 355 1 916 198 103 108 chr5 74731143 74731598 -128353934 - Charlie4a DNA MER1_type -6 502 50 25 0 0 0 chr5 74732047 74732072 -128353460 + AT_rich Low_complexity Low_complexity 1 25 0 847 93 0 0 chr5 74735909 74736016 -128349516 + AluSg/x SINE Alu 177 283 -27 392 52 35 0 chr5 74736016 74736074 -128349458 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 180 77 0 0 chr5 74736916 74736942 -128348590 + (T)n Simple_repeat Simple_repeat 1 26 0 335 311 69 5 chr5 74736986 74737218 -128348314 - L1ME LINE L1 -499 5667 5423 26 0 0 0 chr5 74737304 74737330 -128348202 + AT_rich Low_complexity Low_complexity 1 26 0 483 288 54 29 chr5 74737542 74737820 -128347712 - L1ME LINE L1 -1127 5019 4735 573 169 34 0 chr5 74738337 74738455 -128347077 - L1MA8 LINE L1 0 6291 6170 5306 179 32 10 chr5 74738668 74740624 -128344908 - L1PA16 LINE L1 0 6166 4165 337 263 12 35 chr5 74743482 74743653 -128341879 + T-rich Low_complexity Low_complexity 1 167 0 2185 117 0 3 chr5 74744946 74745253 -128340279 - AluSx SINE Alu -3 309 4 333 321 20 88 chr5 74746252 74746440 -128339092 + HAL1b LINE L1 42 210 -1138 2031 95 0 0 chr5 74746440 74746704 -128338828 + AluSg SINE Alu 47 310 0 333 321 20 88 chr5 74746704 74746764 -128338768 + HAL1b LINE L1 210 273 -1075 291 331 101 28 chr5 74746881 74747385 -128338147 + HAL1b LINE L1 367 907 -441 308 286 57 19 chr5 74747594 74747804 -128337728 + L1 LINE L1 2194 2411 -3735 761 245 18 0 chr5 74747975 74748138 -128337394 - MER58B DNA MER1_type -3 338 173 189 0 0 0 chr5 74748188 74748209 -128337323 + (TATG)n Simple_repeat Simple_repeat 4 24 0 342 153 0 0 chr5 74748280 74748339 -128337193 + (TA)n Simple_repeat Simple_repeat 2 60 0 261 308 56 28 chr5 74748339 74748482 -128337050 + L1 LINE L1 2689 2835 -3311 4721 130 26 1 chr5 74748598 74749339 -128336193 + L1PA15 LINE L1 5386 6144 -21 5316 164 28 12 chr5 74749346 74750349 -128335183 + L1MC2 LINE L1 5315 6333 -11 248 309 86 39 chr5 74750348 74751012 -128334520 + L1 LINE L1 3115 3809 -2337 * 625 265 64 43 chr5 74751258 74751492 -128334040 + MIR SINE MIR 5 243 -19 532 253 116 5 chr5 74751753 74751951 -128333581 - MER112 DNA MER1_type -36 224 5 24 0 0 0 chr5 74752085 74752109 -128333423 + AT_rich Low_complexity Low_complexity 1 24 0 329 277 32 11 chr5 74752907 74753001 -128332531 - L2 LINE L2 -197 3075 2980 383 379 89 32 chr5 74754196 74754534 -128330998 - L2 LINE L2 -5 3267 2911 523 215 41 18 chr5 74754544 74754683 -128330849 - MSTA LTR MaLR -153 273 130 2099 131 131 13 chr5 74754773 74755156 -128330376 + MSTA LTR MaLR 1 428 0 2198 116 0 28 chr5 74755432 74755751 -128329781 + AluSx SINE Alu 1 310 -2 496 236 54 69 chr5 74755898 74756101 -128329431 + MIR SINE MIR 2 201 -61 180 224 143 0 chr5 74756291 74756340 -128329192 + MIR SINE MIR 196 251 -11 521 325 42 17 chr5 74756350 74756590 -128328942 - L2 LINE L2 -1025 2289 2044 2137 124 0 10 chr5 74756919 74757225 -128328307 + AluSx SINE Alu 3 305 -7 391 299 76 22 chr5 74757797 74757981 -128327551 + MIR SINE MIR 21 214 -48 2315 97 7 0 chr5 74758012 74758310 -128327222 - AluSq SINE Alu -13 300 1 22 35 0 0 chr5 74760499 74760528 -128325004 + AT_rich Low_complexity Low_complexity 1 29 0 197 302 11 17 chr5 74760782 74760857 -128324675 - MIR SINE MIR -58 150 74 262 260 47 39 chr5 74761538 74761665 -128323867 - L3b LINE CR1 -202 1381 1254 219 158 53 26 chr5 74761726 74761802 -128323730 + (TA)n Simple_repeat Simple_repeat 2 79 0 336 48 0 0 chr5 74761804 74761846 -128323686 + (CA)n Simple_repeat Simple_repeat 2 43 0 360 250 185 0 chr5 74761971 74762079 -128323453 + MIR3 SINE MIR 52 179 -29 313 273 57 67 chr5 74762389 74762583 -128322949 - L1ME3A LINE L1 -2 6168 5977 243 306 108 0 chr5 74762637 74762794 -128322738 - L1ME3A LINE L1 -207 5955 5782 943 297 82 7 chr5 74762813 74762910 -128322622 - L1ME3A LINE L1 -456 5706 5618 3630 69 0 2 chr5 74762910 74763387 -128322145 - L1PA7 LINE L1 -3 6151 5676 943 297 82 7 chr5 74763387 74763825 -128321707 - L1ME3A LINE L1 -544 5618 5126 1928 213 25 2 chr5 74763873 74764314 -128321218 + L1MB7 LINE L1 3960 4410 -1736 2470 59 0 0 chr5 74764327 74764650 -128320882 - L1P LINE L1 -1622 4524 4202 623 60 0 0 chr5 74764650 74764726 -128320806 + L1PA5 LINE L1 6070 6152 -2 4078 204 24 20 chr5 74764727 74765417 -128320115 + L1MB7 LINE L1 4404 5090 -1094 2241 84 10 17 chr5 74765417 74765714 -128319818 + AluY SINE Alu 1 295 -16 4078 204 24 20 chr5 74765714 74766736 -128318796 + L1MB7 LINE L1 5090 6121 -63 1006 297 92 14 chr5 74766717 74767282 -128318250 - L1ME3A LINE L1 -1529 4617 4009 * 225 185 93 19 chr5 74767400 74767454 -128318078 + MLT1H LTR MaLR 95 152 -397 1056 265 107 29 chr5 74767765 74768279 -128317253 - L1ME3A LINE L1 -2166 3980 3427 1769 149 38 3 chr5 74768825 74769141 -128316391 - L1MC1 LINE L1 -13 6320 5994 570 308 69 24 chr5 74771344 74771591 -128313941 - MIR SINE MIR -3 259 2 221 404 46 6 chr5 74771649 74771803 -128313729 - MIR SINE MIR -70 192 34 432 0 0 0 chr5 74772401 74772449 -128313083 + (TG)n Simple_repeat Simple_repeat 2 49 0 184 307 150 46 chr5 74772557 74772710 -128312822 + L2 LINE L2 1853 2021 -1293 215 276 20 51 chr5 74773087 74773185 -128312347 + L2 LINE L2 3131 3225 -88 21 57 0 0 chr5 74773362 74773397 -128312135 + AT_rich Low_complexity Low_complexity 1 35 0 1359 90 0 0 chr5 74773789 74773956 -128311576 - AluSc SINE Alu -16 293 127 257 305 108 18 chr5 74774069 74774236 -128311296 - MER5A DNA MER1_type 0 189 8 22 0 0 0 chr5 74774663 74774685 -128310847 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr5 74776065 74776092 -128309440 + (GA)n Simple_repeat Simple_repeat 2 28 0 462 18 0 0 chr5 74777706 74777761 -128307771 + (CA)n Simple_repeat Simple_repeat 1 55 0 200 35 35 0 chr5 74778392 74778421 -128307111 + (TG)n Simple_repeat Simple_repeat 2 31 0 12539 27 4 4 chr5 74779111 74781355 -128304177 + L1PA3 LINE L1 3908 6152 -3 733 241 82 32 chr5 74781500 74781932 -128303600 + MER113 DNA MER1_type? 2 521 0 192 97 0 0 chr5 74782156 74782187 -128303345 + (CCCTAA)n Simple_repeat Simple_repeat 4 34 0 237 33 0 0 chr5 74782251 74782281 -128303251 + (T)n Simple_repeat Simple_repeat 1 30 0 690 245 39 73 chr5 74782292 74782578 -128302954 + L2 LINE L2 3038 3313 0 237 174 0 0 chr5 74783115 74783161 -128302371 + MER103 DNA DNA 8 53 -113 406 279 87 0 chr5 74783558 74783662 -128301870 + MIR3 SINE MIR 87 199 -9 1921 115 118 91 chr5 74784372 74784789 -128300743 + MSTA LTR MaLR 1 428 0 236 302 104 10 chr5 74784843 74784939 -128300593 + MIR SINE MIR 43 147 -115 415 345 99 50 chr5 74785467 74785829 -128299703 + L2 LINE L2 2807 3186 -86 938 181 194 41 chr5 74785974 74786267 -128299265 - MER2 DNA MER2_type -7 338 1 24 77 0 0 chr5 74787604 74787656 -128297876 + AT_rich Low_complexity Low_complexity 1 52 0 294 293 32 16 chr5 74787668 74787791 -128297741 - L1ME LINE L1 -400 5721 5597 845 298 110 32 chr5 74789273 74789650 -128295882 - MLT1I LTR MaLR 0 409 4 2773 211 22 40 chr5 74790289 74791007 -128294525 + L1MD1 LINE L1 4943 5605 -637 2421 154 8 8 chr5 74791007 74791397 -128294135 - MLT1B LTR MaLR 0 390 1 2773 211 22 40 chr5 74791397 74791879 -128293653 + L1MD1 LINE L1 5605 6094 -148 427 208 40 18 chr5 74791852 74792050 -128293482 - L1MEc LINE L1 -2812 3403 3195 * 635 286 132 28 chr5 74792064 74792389 -128293143 - LTR16A LTR ERVL -16 434 76 1876 245 119 41 chr5 74792479 74793900 -128291632 - L1MEc LINE L1 -3056 3159 1640 4768 163 24 9 chr5 74793924 74794543 -128290989 - L1MA7 LINE L1 -2 6289 5652 401 0 20 0 chr5 74794543 74794592 -128290940 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 4768 163 24 9 chr5 74794592 74794848 -128290684 - L1MA7 LINE L1 -639 5652 5401 1257 123 0 0 chr5 74794871 74795041 -128290491 - AluSg/x SINE Alu -5 307 138 324 45 0 23 chr5 74795043 74795087 -128290445 - MLT2A1 LTR ERVL -1 452 410 1568 72 49 9 chr5 74795437 74795660 -128289872 - MLT2A1 LTR ERVL -212 232 1 790 196 0 0 chr5 74795669 74795802 -128289730 - FLAM_C SINE Alu 0 133 1 673 107 8 69 chr5 74795802 74795933 -128289599 - L1MA7 LINE L1 -894 5397 5275 351 220 68 17 chr5 74800112 74800230 -128285302 + L1M4 LINE L1 5146 5269 -877 575 123 15 77 chr5 74801432 74801562 -128283970 + L1M LINE L1 5274 5395 -896 826 147 49 0 chr5 74801563 74801706 -128283826 + AluSq/x SINE Alu 1 150 -162 2414 87 38 6 chr5 74801706 74802053 -128283479 + MLT2A1 LTR ERVL 9 366 -78 2419 99 57 23 chr5 74903943 74904295 -128181237 - THE1B LTR MaLR 0 364 1 629 240 93 20 chr5 74904426 74904576 -128180956 - MER45A DNA AcHobo -17 161 1 410 330 9 0 chr5 74904877 74904992 -128180540 - L2 LINE L2 -6 3307 3192 210 150 0 0 chr5 74905032 74905072 -128180460 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 435 273 141 48 chr5 74906266 74906496 -128179036 + MIR SINE MIR 7 262 0 353 303 281 22 chr5 74906511 74906831 -128178701 - L2 LINE L2 -47 3266 2864 2894 170 39 34 chr5 74907050 74907638 -128177894 + L1MA7 LINE L1 5700 6290 -1 2705 87 11 11 chr5 74908512 74908867 -128176665 - THE1A LTR MaLR 0 355 1 443 307 14 7 chr5 74909267 74909407 -128176125 - MIR SINE MIR -108 154 14 345 224 10 10 chr5 74909906 74910004 -128175528 + MLT2B1 LTR ERVL 1 98 -422 * 930 197 59 24 chr5 74909998 74910210 -128175322 + MLT2B1 LTR ERVL 230 471 -49 292 267 186 0 chr5 74911890 74911976 -128173556 - MIR SINE MIR -67 141 40 642 281 46 50 chr5 74913508 74913768 -128171764 - MIR SINE MIR 0 262 4 633 161 23 138 chr5 74913795 74913969 -128171563 - MER5A DNA MER1_type -31 158 5 536 326 66 8 chr5 74914013 74914255 -128171277 + MIR SINE MIR 4 259 -3 21 57 0 0 chr5 74914275 74914310 -128171222 + AT_rich Low_complexity Low_complexity 1 35 0 374 326 16 16 chr5 74914341 74914470 -128171062 + L2 LINE L2 2920 3048 -265 391 294 117 24 chr5 74914533 74914996 -128170536 - L1MEd LINE L1 -2637 3492 2987 1262 263 143 57 chr5 74915003 74915687 -128169845 - L1MEd LINE L1 -5373 746 4 340 309 49 49 chr5 74915692 74915915 -128169617 + L2 LINE L2 3089 3311 -2 235 288 83 40 chr5 74915985 74916184 -128169348 + HAL1b LINE L1 1193 1299 -49 197 283 65 33 chr5 74916742 74916834 -128168698 - L2 LINE L2 -24 3248 3154 300 308 136 32 chr5 74916931 74917152 -128168380 + L2 LINE L2 2808 3051 -221 515 159 30 23 chr5 74917152 74917284 -128168248 + CT-rich Low_complexity Low_complexity 4 136 0 1803 167 37 0 chr5 74917286 74917586 -128167946 - AluJo SINE Alu 0 312 2 226 295 42 53 chr5 74917640 74917735 -128167797 - L2 LINE L2 -3 3269 3176 6410 95 4 35 chr5 74918034 74919128 -128166404 + L1PB1 LINE L1 5084 6150 -1 26 50 0 0 chr5 74919128 74919168 -128166364 + AT_rich Low_complexity Low_complexity 1 40 0 1215 316 59 29 chr5 74919311 74920007 -128165525 - L2 LINE L2 -900 2414 1698 754 239 18 31 chr5 74920231 74920453 -128165079 + LTR37B LTR ERV1 246 464 -4 671 282 52 16 chr5 74922285 74922533 -128162999 - MIR SINE MIR 0 262 6 260 305 74 11 chr5 74922567 74922662 -128162870 - L3 LINE CR1 -42 1535 1435 1173 117 53 0 chr5 74922859 74923065 -128162467 - MER6 DNA MER2_type -46 819 603 1215 216 14 24 chr5 74923073 74923365 -128162167 + MSTB1-int LTR MaLR 1056 1344 -307 43496 34 22 1 chr5 74923368 74929383 -128156149 + L1PA3 LINE L1 12 6155 0 1421 183 39 16 chr5 74929388 74929699 -128155833 + MSTB1-int LTR MaLR 1334 1651 0 2518 118 96 30 chr5 74929699 74930104 -128155428 + MSTB1 LTR MaLR 1 432 0 2043 199 3 6 chr5 74930104 74930451 -128155081 - MER6 DNA MER2_type -519 346 1 666 266 56 28 chr5 74930649 74930863 -128154669 + MIR SINE MIR 12 231 -31 242 241 40 0 chr5 74934930 74935003 -128150529 - MIR SINE MIR -67 141 89 236 294 128 37 chr5 74937225 74937412 -128148120 + MIR3 SINE MIR 4 207 -1 180 325 70 9 chr5 74937486 74937600 -128147932 - L3b LINE CR1 -358 1225 1105 307 288 72 39 chr5 74937795 74937948 -128147584 + MIR3 SINE MIR 29 186 -22 188 35 35 0 chr5 74938065 74938094 -128147438 + (CAA)n Simple_repeat Simple_repeat 2 31 0 223 263 53 0 chr5 74938467 74938524 -128147008 - MIR SINE MIR -18 244 185 379 303 176 31 chr5 74938620 74938881 -128146651 - MER102a DNA MER1_type 0 330 32 22 70 0 0 chr5 74939806 74939849 -128145683 + AT_rich Low_complexity Low_complexity 1 43 0 2318 253 98 37 chr5 74940274 74941005 -128144527 - MER21B LTR ERV1 -58 805 30 357 279 0 0 chr5 74941031 74941110 -128144422 - MER21B LTR ERV1 -773 90 12 910 219 58 34 chr5 74941298 74941638 -128143894 - MER4C LTR ERV1 -1 695 165 715 191 20 71 chr5 74941611 74941917 -128143615 - MER4C LTR ERV1 -315 349 1 * 7440 42 1 0 chr5 74941944 74943166 -128142366 + L1PA5 LINE L1 4922 6154 0 3325 233 49 9 chr5 74943720 74944696 -128140836 - L1ME1 LINE L1 -5 6972 5963 478 174 0 43 chr5 74944704 74944796 -128140736 + FLAM_A SINE Alu 35 122 -20 1145 193 49 111 chr5 74944797 74945283 -128140249 - L1ME1 LINE L1 -981 5976 5521 388 200 103 0 chr5 74945294 74945421 -128140111 - L1ME1 LINE L1 -4783 2095 1581 * 4880 182 56 9 chr5 74945414 74946443 -128139089 - L1MC3 LINE L1 -10 7775 6698 682 211 118 93 chr5 74946465 74946788 -128138744 - L1ME1 LINE L1 -5324 1535 1205 24 32 0 0 chr5 74947602 74947633 -128137899 + AT_rich Low_complexity Low_complexity 1 31 0 565 232 124 138 chr5 74948957 74949311 -128136221 - MER21B LTR ERV1 -514 349 1 235 365 97 7 chr5 74949920 74950065 -128135467 - MIR SINE MIR -84 178 21 4349 183 66 28 chr5 74951428 74952643 -128132889 + L1MB8 LINE L1 4867 6177 -1 21 0 0 0 chr5 74952704 74952725 -128132807 + AT_rich Low_complexity Low_complexity 1 21 0 34 89 0 0 chr5 74952984 74953074 -128132458 + AT_rich Low_complexity Low_complexity 1 90 0 23 0 0 0 chr5 74953489 74953512 -128132020 + AT_rich Low_complexity Low_complexity 1 23 0 417 260 110 29 chr5 74953623 74953904 -128131628 + L1ME4a LINE L1 5647 5950 -171 250 272 92 63 chr5 74953951 74954333 -128131199 + L1 LINE L1 4769 5161 -985 200 167 19 19 chr5 74954481 74954535 -128130997 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 387 375 71 36 chr5 74954540 74954876 -128130656 + L1MEc LINE L1 34 381 -6015 391 265 33 48 chr5 74955135 74955246 -128130286 + L1MEc LINE L1 636 747 -5649 2226 134 25 11 chr5 74955246 74955605 -128129927 + THE1B LTR MaLR 1 364 0 391 265 33 48 chr5 74955605 74955765 -128129767 + L1MEc LINE L1 747 903 -5493 4493 245 90 62 chr5 74955802 74956465 -128129067 + L1MEc LINE L1 944 1587 -4628 2064 126 20 7 chr5 74956465 74956767 -128128765 + AluSq SINE Alu 1 306 -7 4493 245 90 62 chr5 74956767 74957177 -128128355 + L1MEc LINE L1 1587 1984 -4231 252 0 0 0 chr5 74957177 74957205 -128128327 + (CA)n Simple_repeat Simple_repeat 1 28 0 4493 245 90 62 chr5 74957205 74959138 -128126394 + L1MEc LINE L1 1984 4059 -2156 2392 116 19 11 chr5 74959138 74959510 -128126022 - THE1C LTR MaLR 0 375 1 4493 245 90 62 chr5 74959510 74960392 -128125140 + L1MEc LINE L1 4059 4915 -1300 477 281 9 9 chr5 74960396 74960510 -128125022 + MLT1F LTR MaLR 4 117 -425 733 219 39 44 chr5 74960612 74960925 -128124607 - L1ME LINE L1 -5291 1656 1350 22 35 0 0 chr5 74961416 74961445 -128124087 + AT_rich Low_complexity Low_complexity 1 29 0 5572 109 32 0 chr5 74965750 74966567 -128118965 + L1PA14 LINE L1 5317 6159 -2 398 321 74 70 chr5 74966592 74966962 -128118570 + L2 LINE L2 2216 2590 -724 2324 100 0 0 chr5 74966962 74967263 -128118269 - AluSg SINE Alu -7 303 3 398 321 74 70 chr5 74967263 74967322 -128118210 + L2 LINE L2 2590 2647 -667 2041 250 14 62 chr5 74967342 74968085 -128117447 - L1ME2 LINE L1 -2 6957 6251 882 283 51 54 chr5 74968088 74968721 -128116811 - L1ME2 LINE L1 -4233 2889 2259 2580 106 0 0 chr5 74968731 74969088 -128116444 - L1PB1 LINE L1 -1 6150 5791 333 0 0 0 chr5 74969088 74969125 -128116407 + (TG)n Simple_repeat Simple_repeat 2 38 0 2580 106 0 0 chr5 74969125 74969136 -128116396 - L1PB1 LINE L1 -359 5792 5782 227 281 11 11 chr5 74969184 74969273 -128116259 + L1MC4 LINE L1 6614 6702 -1340 314 291 0 12 chr5 74969274 74969360 -128116172 - L1MC4 LINE L1 -1339 6703 6619 3835 141 18 8 chr5 74969361 74970461 -128115071 - L1P5 LINE L1 -365 5786 4678 871 254 112 0 chr5 74970563 74970956 -128114576 + MER114 LTR ERV 100 536 -112 856 289 72 47 chr5 74971096 74971494 -128114038 - L1ME2 LINE L1 -4887 1536 1546 21219 46 9 0 chr5 74971494 74974921 -128110611 - L1PA5 LINE L1 -17 6137 2680 856 289 72 47 chr5 74974921 74975510 -128110022 - L1ME2 LINE L1 -4876 1547 974 966 318 13 20 chr5 74975748 74976138 -128109394 - L1ME2 LINE L1 -5954 469 83 733 249 11 28 chr5 74976340 74976521 -128109011 - MER20 DNA MER1_type -2 217 40 234 62 0 0 chr5 74976657 74976689 -128108843 + (TC)n Simple_repeat Simple_repeat 1 32 0 210 128 0 0 chr5 74976694 74976733 -128108799 + (CA)n Simple_repeat Simple_repeat 1 39 0 222 62 0 0 chr5 74976898 74976930 -128108602 + (TG)n Simple_repeat Simple_repeat 2 33 0 201 175 0 0 chr5 74977580 74977620 -128107912 + GA-rich Low_complexity Low_complexity 1 40 0 699 264 119 13 chr5 74978457 74978684 -128106848 + MIR SINE MIR 8 258 -4 209 204 0 0 chr5 74978718 74978767 -128106765 + (TA)n Simple_repeat Simple_repeat 1 49 0 555 263 178 13 chr5 74979049 74979201 -128106331 + MER5B DNA MER1_type 2 178 0 628 207 0 0 chr5 74979209 74979325 -128106207 - MER5A DNA MER1_type 0 189 74 1932 248 75 0 chr5 74979325 74979857 -128105675 - MER90 LTR ERV1 0 575 4 269 175 18 53 chr5 74979874 74979931 -128105601 - MER5A DNA MER1_type -134 55 1 396 323 90 53 chr5 74980198 74980520 -128105012 + L2 LINE L2 2928 3261 -52 23 0 0 0 chr5 74980692 74980715 -128104817 + AT_rich Low_complexity Low_complexity 1 23 0 186 260 40 0 chr5 74982157 74982207 -128103325 + L3 LINE CR1 173 224 -1353 2676 152 14 2 chr5 74982287 74982714 -128102818 + MSTB1 LTR MaLR 1 432 0 2217 184 73 45 chr5 74983375 74983811 -128101721 + MLT2B1 LTR ERVL 1 423 -97 288 0 0 0 chr5 74983811 74983843 -128101689 + (TC)n Simple_repeat Simple_repeat 1 32 0 285 29 0 0 chr5 74983844 74983878 -128101654 + (TG)n Simple_repeat Simple_repeat 2 35 0 2217 184 73 45 chr5 74983878 74983945 -128101587 + MLT2B1 LTR ERVL 422 520 0 282 280 36 33 chr5 74986513 74986665 -128098867 + MIR SINE MIR 36 152 -56 208 198 0 53 chr5 74987229 74987331 -128098201 - L2 LINE L2 0 3272 3171 327 172 24 213 chr5 74987757 74987926 -128097606 + MIR SINE MIR 115 251 -11 2113 95 22 38 chr5 74988108 74988425 -128097107 + AluSx SINE Alu 1 312 0 2015 131 0 0 chr5 74988433 74988745 -128096787 + AluSx SINE Alu 1 312 0 301 302 64 84 chr5 74988757 74989197 -128096335 - L2 LINE L2 -791 2523 2093 1394 246 89 68 chr5 74989670 74990386 -128095146 + L1MC4a LINE L1 5254 5984 -1824 471 261 92 99 chr5 74990698 74991362 -128094170 + L1MC4a LINE L1 6563 7230 -731 22 0 0 0 chr5 74992547 74992569 -128092963 + AT_rich Low_complexity Low_complexity 1 22 0 649 277 118 94 chr5 74993130 74993513 -128092019 - L2 LINE L2 -3 3269 2878 40515 36 22 1 chr5 74995086 75001110 -128084422 + L1PA2 LINE L1 1 6155 0 2035 125 17 9 chr5 75001217 75001561 -128083971 - THE1C LTR MaLR -28 347 1 500 63 0 13 chr5 75001561 75001640 -128083892 - THE1C-int LTR MaLR 0 1580 1503 817 133 15 0 chr5 75001642 75001777 -128083755 - THE1C-int LTR MaLR -1443 137 1 2210 134 21 19 chr5 75001777 75002151 -128083381 - THE1C LTR MaLR 0 375 1 385 235 87 0 chr5 75002506 75002621 -128082911 - LTR16C LTR ERVL -7 484 360 446 250 15 0 chr5 75002650 75002786 -128082746 - LTR37A LTR ERV1 0 426 289 398 218 46 0 chr5 75003074 75003161 -128082371 - LTR16C LTR ERVL -205 286 196 436 235 81 60 chr5 75003335 75003484 -128082048 + L2 LINE L2 3154 3305 -8 250 59 44 44 chr5 75004244 75004312 -128081220 + (CAAAAA)n Simple_repeat Simple_repeat 6 73 0 200 296 14 14 chr5 75007146 75007217 -128078315 + MIR SINE MIR 100 170 -92 505 264 136 4 chr5 75007849 75008099 -128077433 + LTR50 LTR ERVL 1 283 -512 717 202 176 15 chr5 75008099 75008294 -128077238 + LTR50 LTR ERVL 478 729 -66 5019 186 33 17 chr5 75008294 75009359 -128076173 + Tigger6a DNA MER2_type 2 1083 0 717 202 176 15 chr5 75009359 75009430 -128076102 + LTR50 LTR ERVL 729 787 -8 190 302 0 32 chr5 75009496 75009559 -128075973 + MIR3 SINE MIR 9 69 -139 500 227 27 0 chr5 75009681 75009791 -128075741 + MLT1D LTR MaLR 4 116 -389 220 217 48 48 chr5 75009794 75009877 -128075655 - MIR SINE MIR -56 206 124 1401 204 92 27 chr5 75009971 75010355 -128075177 + MLT1D LTR MaLR 92 505 0 2662 191 44 40 chr5 75010671 75011170 -128074362 + L1PA4 LINE L1 4419 4915 -1240 579 165 9 0 chr5 75011170 75011279 -128074253 + MER41B LTR ERV1 481 590 -45 2662 191 44 40 chr5 75011279 75012483 -128073049 + L1PA4 LINE L1 4915 6152 -3 1883 119 39 60 chr5 75012493 75012878 -128072654 + L1MA9 LINE L1 5936 6312 0 330 268 200 21 chr5 75013194 75013384 -128072148 + MIR SINE MIR 24 247 -15 210 333 0 0 chr5 75013533 75013590 -128071942 + L2 LINE L2 3208 3264 -8 552 267 84 38 chr5 75014157 75014524 -128071008 + L1MC4 LINE L1 7393 7776 -266 304 279 129 7 chr5 75014530 75014677 -128070855 + L1MC4 LINE L1 7876 8040 -2 2102 115 0 0 chr5 75015002 75015317 -128070215 - AluSg SINE Alu 0 315 1 225 65 0 0 chr5 75016009 75016040 -128069492 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 617 304 83 4 chr5 75016454 75016684 -128068848 - MIR SINE MIR -2 260 13 385 252 122 14 chr5 75017686 75017825 -128067707 - MIR SINE MIR -42 220 67 1887 214 97 34 chr5 75017860 75018388 -128067144 - MER74B LTR ERVL -4 618 58 639 271 21 16 chr5 75019026 75019214 -128066318 - MIR SINE MIR -3 259 71 442 298 120 22 chr5 75020319 75020544 -128064988 - MIR SINE MIR -6 256 10 181 86 29 57 chr5 75021060 75021095 -128064437 - L3 LINE CR1 -15 1562 1529 489 265 12 25 chr5 75022401 75022563 -128062969 + MER117 DNA MER1_type 3 162 -35 511 267 69 6 chr5 75022584 75022768 -128062764 - MIR SINE MIR -63 145 11 274 292 29 66 chr5 75022777 75022914 -128062618 + MIR SINE MIR 76 207 -55 3468 169 17 53 chr5 75023819 75024543 -128060989 + L1MB4 LINE L1 5450 6147 -33 6033 100 26 0 chr5 75024543 75025838 -128059694 - L1PA15 LINE L1 -2 6163 4850 3468 169 17 53 chr5 75025838 75025870 -128059662 + L1MB4 LINE L1 6147 6179 -1 1408 180 15 101 chr5 75026127 75026522 -128059010 + MLT1A1 LTR MaLR 3 363 -2 299 324 53 71 chr5 75026703 75026938 -128058594 - L2 LINE L2 -217 3055 2817 2270 89 0 0 chr5 75026938 75027219 -128058313 + AluSq SINE Alu 1 281 -32 194 0 39 0 chr5 75027221 75027247 -128058285 + (TAA)n Simple_repeat Simple_repeat 2 28 0 299 324 53 71 chr5 75027247 75027397 -128058135 - L2 LINE L2 -456 2816 2628 577 204 49 42 chr5 75027416 75027558 -128057974 - L2 LINE L2 0 3313 3171 478 307 105 18 chr5 75029467 75029695 -128055837 + MIR SINE MIR 14 261 -1 2179 114 28 0 chr5 75030251 75030541 -128054991 - AluSg SINE Alu -12 298 1 624 308 40 5 chr5 75030854 75031078 -128054454 - MIR SINE MIR -14 248 17 897 290 130 35 chr5 75031448 75032399 -128053133 - L1M4 LINE L1 -1318 4828 3776 580 298 101 58 chr5 75032400 75032934 -128052598 - L1M4 LINE L1 -2409 3737 3181 2942 234 12 24 chr5 75032934 75034049 -128051483 - L1ME1 LINE L1 -16 6146 5051 1605 115 88 83 chr5 75034056 75034093 -128051439 - THE1C LTR MaLR 0 375 340 9810 28 16 3 chr5 75034093 75036039 -128049493 + L1PA4 LINE L1 4199 6155 0 1605 115 88 83 chr5 75036039 75036374 -128049158 - THE1C LTR MaLR -35 340 1 1921 215 18 40 chr5 75036377 75036926 -128048606 - L1ME1 LINE L1 -1103 5043 4507 2194 104 35 29 chr5 75036955 75037302 -128048230 - THE1B LTR MaLR -15 349 1 893 254 61 0 chr5 75037302 75037664 -128047868 - L1ME1 LINE L1 -1652 4494 4111 580 349 16 11 chr5 75038630 75038819 -128046713 - MIR3 SINE MIR -2 206 17 603 40 0 0 chr5 75039301 75039375 -128046157 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 1971 152 11 52 chr5 75039385 75039766 -128045766 + MLT1A1 LTR MaLR 1 365 0 281 254 85 51 chr5 75039766 75039884 -128045648 + MIR SINE MIR 85 206 -56 1445 271 24 9 chr5 75040322 75040779 -128044753 - LTR16B LTR ERVL 0 464 1 568 301 87 15 chr5 75040998 75041194 -128044338 - MIR SINE MIR -40 222 13 316 287 57 38 chr5 75041872 75042029 -128043503 + MIR3 SINE MIR 3 162 -46 276 191 16 95 chr5 75042389 75042452 -128043080 - L2 LINE L2 -8 3264 3207 356 195 58 29 chr5 75043220 75043394 -128042138 + (TA)n Simple_repeat Simple_repeat 2 180 0 225 139 0 0 chr5 75043607 75043650 -128041882 + (TA)n Simple_repeat Simple_repeat 2 44 0 1000 209 86 26 chr5 75043741 75044123 -128041409 - L1MC5 LINE L1 -50 7911 7507 1015 173 144 0 chr5 75044141 75044412 -128041120 - MER33 DNA MER1_type -9 315 6 741 167 0 0 chr5 75045183 75045297 -128040235 + FLAM_C SINE Alu 2 115 -18 27 29 0 0 chr5 75045302 75045336 -128040196 + AT_rich Low_complexity Low_complexity 1 34 0 219 309 9 82 chr5 75045647 75045757 -128039775 - L3 LINE CR1 -17 1560 1459 226 271 0 17 chr5 75046871 75046930 -128038602 - L2 LINE L2 -1 3271 3214 360 0 0 0 chr5 75048513 75048553 -128036979 + (TG)n Simple_repeat Simple_repeat 1 40 0 426 222 0 0 chr5 75048895 75049003 -128036529 + MER53 DNA DNA 1 108 -81 561 160 111 0 chr5 75049060 75049204 -128036328 + MER53 DNA DNA 30 189 0 248 272 70 18 chr5 75049246 75049360 -128036172 + MLT1J LTR MaLR 102 221 -290 402 319 44 0 chr5 75049397 75049557 -128035975 + MLT1J LTR MaLR 343 509 -2 186 43 0 0 chr5 75049809 75049832 -128035700 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1702 199 33 13 chr5 75050599 75050996 -128034536 + MLT1C LTR MaLR 63 467 0 372 148 0 0 chr5 75052271 75052332 -128033200 + LTR52-int LTR ERVL 150 210 -3346 664 263 30 4 chr5 75052342 75052574 -128032958 + L1MC5 LINE L1 7294 7531 -430 2004 93 18 0 chr5 75052736 75053037 -128032495 + AluSp SINE Alu 1 306 0 676 226 16 18 chr5 75053039 75053357 -128032175 + LTR52 LTR ERVL 14 419 -2 2215 136 0 0 chr5 75053929 75054231 -128031301 - AluSq SINE Alu -11 302 1 867 301 38 9 chr5 75054538 75054883 -128030649 - MLT1J2 LTR MaLR -14 436 82 497 302 133 7 chr5 75055159 75055437 -128030095 - L1M4 LINE L1 -2934 3914 3602 963 219 143 43 chr5 75055445 75055773 -128029759 - MLT1A1 LTR MaLR 0 365 5 470 341 37 7 chr5 75055865 75056273 -128029259 - L1M4 LINE L1 -3327 3521 3102 208 227 0 0 chr5 75056451 75056495 -128029037 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 2265 106 0 0 chr5 75056772 75057064 -128028468 + AluSg SINE Alu 1 292 -18 180 0 0 0 chr5 75057085 75057105 -128028427 + (CA)n Simple_repeat Simple_repeat 2 21 0 370 312 124 17 chr5 75057105 75057339 -128028193 - L1ME3A LINE L1 -244 5909 5651 2943 242 34 15 chr5 75058023 75058957 -128026575 - L1ME3A LINE L1 -1034 5095 4144 229 298 62 22 chr5 75059006 75059184 -128026348 - L1M4 LINE L1 -4374 2475 2291 977 333 73 36 chr5 75059238 75060393 -128025139 - L1ME3A LINE L1 -4910 1209 13 483 256 77 58 chr5 75062053 75062260 -128023272 - L2 LINE L2 0 3313 3103 262 360 33 13 chr5 75062297 75062450 -128023082 + L2 LINE L2 3153 3308 -5 24 0 0 0 chr5 75062570 75062594 -128022938 + AT_rich Low_complexity Low_complexity 1 24 0 296 252 45 36 chr5 75063532 75063643 -128021889 - MIR SINE MIR -64 144 33 372 22 0 0 chr5 75063848 75063893 -128021639 + (CA)n Simple_repeat Simple_repeat 2 46 0 369 0 0 0 chr5 75063892 75063933 -128021599 + (GA)n Simple_repeat Simple_repeat 2 42 0 * 314 200 40 27 chr5 75064068 75064143 -128021389 - L2 LINE L2 -9 3263 3188 1469 151 41 7 chr5 75065422 75065693 -128019839 - L1PA16 LINE L1 -9 6157 5878 237 252 76 0 chr5 75065693 75065812 -128019720 + Charlie7 DNA MER1_type 2480 2607 -5 271 347 24 40 chr5 75066112 75066236 -128019296 + MIR3 SINE MIR 76 197 -11 546 282 137 39 chr5 75066984 75067218 -128018314 + MIR SINE MIR 1 257 -5 556 294 69 5 chr5 75068444 75068648 -128016884 + MIR SINE MIR 3 219 -43 2846 159 74 26 chr5 75068991 75069570 -128015962 - LTR26E LTR ERV1 -15 607 1 2850 102 52 5 chr5 75069943 75070384 -128015148 - MER4C LTR ERV1 -3 462 1 23 33 0 0 chr5 75070670 75070700 -128014832 + AT_rich Low_complexity Low_complexity 1 30 0 2058 128 3 7 chr5 75070701 75070991 -128014541 - AluSx SINE Alu -23 289 1 693 287 68 33 chr5 75071663 75071970 -128013562 - L1ME LINE L1 -420 5701 5384 607 189 57 23 chr5 75072458 75072633 -128012899 - Charlie4a DNA MER1_type -6 502 322 24 67 0 0 chr5 75072653 75072698 -128012834 + AT_rich Low_complexity Low_complexity 1 45 0 956 199 49 56 chr5 75072764 75072928 -128012604 - Charlie4a DNA MER1_type -1647 314 151 544 91 0 0 chr5 75072928 75073005 -128012527 - MADE1 DNA Mariner 0 80 4 956 199 49 56 chr5 75073005 75073127 -128012405 - Charlie4a DNA MER1_type -1810 151 30 388 360 23 6 chr5 75073971 75074146 -128011386 + L2 LINE L2 3131 3308 -5 510 276 39 33 chr5 75074176 75074357 -128011175 + MIR SINE MIR 6 187 -75 21 36 0 0 chr5 75076409 75076437 -128009095 + AT_rich Low_complexity Low_complexity 1 28 0 267 31 0 0 chr5 75076695 75076727 -128008805 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 2245 136 5 48 chr5 75077698 75077953 -128007579 + MSTA LTR MaLR 6 236 -192 2507 141 31 12 chr5 75077953 75078373 -128007159 - MSTA LTR MaLR 0 428 1 2245 136 5 48 chr5 75078373 75078559 -128006973 + MSTA LTR MaLR 236 428 0 226 316 25 13 chr5 75079110 75079189 -128006343 + L3 LINE CR1 1493 1572 -5 206 224 0 35 chr5 75080120 75080178 -128005354 + MIR SINE MIR 164 219 -43 246 116 0 0 chr5 75081108 75081151 -128004381 + (TGAG)n Simple_repeat Simple_repeat 1 43 0 196 309 105 79 chr5 75081792 75081944 -128003588 - MIR SINE MIR -50 212 57 818 238 95 14 chr5 75083251 75083461 -128002071 - MIR SINE MIR -25 237 11 211 175 16 32 chr5 75083540 75083603 -128001929 + T-rich Low_complexity Low_complexity 4 65 0 305 298 81 40 chr5 75084201 75084325 -128001207 + L2 LINE L2 3143 3271 -1 275 236 0 34 chr5 75084551 75084640 -128000892 + L1MC5 LINE L1 7832 7917 -44 21 0 0 0 chr5 75085318 75085339 -128000193 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 75086613 75086634 -127998898 + AT_rich Low_complexity Low_complexity 1 21 0 5178 51 3 0 chr5 75087542 75088200 -127997332 + L1PA5 LINE L1 5520 6179 0 2575 138 5 0 chr5 75089121 75089521 -127996011 + MER57A LTR ERV1 1 402 -1 207 0 0 0 chr5 75089637 75089660 -127995872 + (A)n Simple_repeat Simple_repeat 1 23 0 2266 132 32 56 chr5 75090062 75090133 -127995399 - Tigger2 DNA MER2_type 0 2718 2647 1546 184 52 3 chr5 75090133 75090421 -127995111 - AluJo SINE Alu -6 306 5 2266 132 32 56 chr5 75090421 75090812 -127994720 - Tigger2 DNA MER2_type -71 2647 2267 444 159 0 0 chr5 75090796 75090865 -127994667 - Tigger2 DNA MER2_type -2649 69 1 * 234 0 0 0 chr5 75090884 75090910 -127994622 + (TA)n Simple_repeat Simple_repeat 1 26 0 1414 186 71 0 chr5 75090912 75091164 -127994368 - AluJb SINE Alu -38 274 5 201 74 0 0 chr5 75091189 75091216 -127994316 + (TG)n Simple_repeat Simple_repeat 2 28 0 346 191 99 19 chr5 75091808 75091970 -127993562 - L1ME4a LINE L1 -8 6113 5939 232 351 54 0 chr5 75092342 75092453 -127993079 + MIR SINE MIR 83 199 -63 2219 126 0 3 chr5 75093251 75093561 -127991971 + AluSx SINE Alu 1 309 -3 392 164 21 143 chr5 75093566 75093706 -127991826 + L1MC2 LINE L1 5258 5380 -953 1050 111 23 35 chr5 75093706 75093878 -127991654 + AluSc SINE Alu 123 292 -17 4854 170 18 4 chr5 75093878 75094811 -127990721 + L1MC2 LINE L1 5390 6335 -9 230 191 0 16 chr5 75095385 75095448 -127990084 + GA-rich Low_complexity Low_complexity 3 64 0 333 363 100 6 chr5 75095868 75096028 -127989504 - MIR3 SINE MIR -15 193 19 2394 65 0 3 chr5 75096455 75096747 -127988785 - AluY SINE Alu -20 291 1 216 192 121 61 chr5 75096747 75096842 -127988690 - L2 LINE L2 -563 2751 2651 986 197 121 0 chr5 75097248 75097446 -127988086 - MER58A DNA MER1_type 0 224 3 348 238 119 40 chr5 75097671 75097797 -127987735 - MIR3 SINE MIR -1 207 72 660 257 72 36 chr5 75098978 75099200 -127986332 - MIR SINE MIR -24 238 9 251 333 111 67 chr5 75099226 75099763 -127985769 + L2 LINE L2 2686 3245 -27 230 146 42 0 chr5 75099865 75099913 -127985619 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 313 279 38 0 chr5 75099969 75100048 -127985484 - MIR SINE MIR -144 118 37 368 176 132 22 chr5 75100459 75100550 -127984982 + LTR33 LTR ERVL 421 521 0 587 326 98 18 chr5 75100610 75101048 -127984484 + L1ME3A LINE L1 5417 5889 -281 280 244 13 13 chr5 75103171 75103249 -127982283 - MER116 DNA Mariner 0 80 3 2318 105 0 10 chr5 75103824 75104137 -127981395 + AluSx SINE Alu 2 311 -1 372 313 0 76 chr5 75105115 75105246 -127980286 - L2 LINE L2 -4 3309 3189 2383 103 0 3 chr5 75105256 75105567 -127979965 - AluSq SINE Alu -3 310 1 956 223 11 11 chr5 75105883 75106067 -127979465 - MER20 DNA MER1_type 0 219 36 1906 137 10 27 chr5 75106694 75106994 -127978538 - AluSx SINE Alu -15 297 3 319 318 8 61 chr5 75107238 75107370 -127978162 + L2 LINE L2 3146 3270 -2 73 66 0 0 chr5 75107423 75107559 -127977973 + AT_rich Low_complexity Low_complexity 1 136 0 211 374 18 99 chr5 75107744 75108076 -127977456 - L2 LINE L2 -2 3270 2966 2304 71 51 3 chr5 75108116 75108411 -127977121 + AluSc SINE Alu 1 309 0 1676 177 0 30 chr5 75109228 75109527 -127976005 + AluJo SINE Alu 1 290 -22 207 0 0 0 chr5 75109562 75109585 -127975947 + (GGAA)n Simple_repeat Simple_repeat 2 24 0 329 91 0 18 chr5 75109608 75109663 -127975869 + (GA)n Simple_repeat Simple_repeat 2 55 0 652 184 6 6 chr5 75109692 75109850 -127975682 + GA-rich Low_complexity Low_complexity 2 159 0 222 37 0 0 chr5 75111103 75111130 -127974402 + (TG)n Simple_repeat Simple_repeat 1 27 0 300 53 0 0 chr5 75111130 75111168 -127974364 + (GA)n Simple_repeat Simple_repeat 2 39 0 240 86 0 0 chr5 75111278 75111313 -127974219 + (CA)n Simple_repeat Simple_repeat 2 36 0 2078 168 12 66 chr5 75111918 75112329 -127973203 + MLT1B LTR MaLR 1 389 -1 31 0 0 0 chr5 75112884 75112915 -127972617 + AT_rich Low_complexity Low_complexity 1 31 0 1202 191 45 122 chr5 75113108 75113293 -127972239 - MLT1B LTR MaLR -1 389 191 12060 22 0 0 chr5 75113293 75115382 -127970150 - L1PA2 LINE L1 0 6155 4067 1202 191 45 122 chr5 75115382 75115452 -127970080 - MLT1B LTR MaLR -199 191 117 2303 103 0 3 chr5 75115452 75115763 -127969769 - AluSg SINE Alu 0 310 1 1202 191 45 122 chr5 75115763 75115925 -127969607 - MLT1B LTR MaLR -273 117 3 1789 255 47 1 chr5 75115927 75116379 -127969153 - MLT1B-int LTR MaLR 0 1735 950 320 301 68 0 chr5 75116471 75116574 -127968958 - MLT1B-int LTR MaLR -946 789 680 4250 154 22 12 chr5 75116677 75117402 -127968130 - MLT1B-int LTR MaLR -639 732 1 1525 187 58 71 chr5 75117402 75117797 -127967735 - MLT1B LTR MaLR 0 390 1 427 302 28 60 chr5 75118255 75118437 -127967095 + MIR3 SINE MIR 10 185 -23 432 144 0 45 chr5 75120506 75120617 -127964915 + (TTCC)n Simple_repeat Simple_repeat 2 107 0 498 250 16 23 chr5 75120777 75120905 -127964627 + MER5A DNA MER1_type 62 188 -1 233 254 0 0 chr5 75120985 75121040 -127964492 - MER5A DNA MER1_type 0 189 135 188 250 23 125 chr5 75121034 75121122 -127964410 + MER5A DNA MER1_type 103 181 -8 * 732 296 6 0 chr5 75121345 75121521 -127964011 + MER45A DNA AcHobo 1 177 -1 356 243 207 14 chr5 75121733 75121955 -127963577 + L1MC/D LINE L1 5529 5793 -328 540 156 24 168 chr5 75122197 75122309 -127963223 + MLT1D LTR MaLR 3 85 -420 825 178 0 0 chr5 75122309 75122427 -127963105 + FLAM_C SINE Alu 1 118 -15 540 156 24 168 chr5 75122427 75122481 -127963051 + MLT1D LTR MaLR 85 145 -360 519 243 7 11 chr5 75122481 75122506 -127963026 + L1ME3A LINE L1 5701 5725 -437 1583 185 173 30 chr5 75122506 75122906 -127962626 - MSTB2 LTR MaLR 0 457 1 519 243 7 11 chr5 75122906 75123018 -127962514 + L1ME3A LINE L1 5725 5830 -332 25 0 0 0 chr5 75123033 75123058 -127962474 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 75123115 75123138 -127962394 + AT_rich Low_complexity Low_complexity 1 23 0 305 167 21 13 chr5 75123167 75123245 -127962287 + L1ME3A LINE L1 5877 5956 -208 2109 142 0 0 chr5 75123251 75123560 -127961972 + AluSx SINE Alu 3 311 -1 5355 141 29 27 chr5 75123574 75124535 -127960997 + L1MA7 LINE L1 5328 6290 -1 2374 78 0 0 chr5 75124541 75124858 -127960674 + AluY SINE Alu 1 317 0 428 266 93 7 chr5 75124887 75125026 -127960506 + L1ME3A LINE L1 5989 6139 -31 4456 120 96 107 chr5 75125035 75126459 -127959073 - pTR5 LTR ERV1 0 2438 741 579 143 62 219 chr5 75127225 75127254 -127958278 + MER5A DNA MER1_type 1 33 -156 201 39 0 0 chr5 75127254 75127280 -127958252 + (CAG)n Simple_repeat Simple_repeat 1 26 0 579 143 62 219 chr5 75127280 75127474 -127958058 + MER5A DNA MER1_type 33 189 0 2319 193 13 19 chr5 75128431 75128908 -127956624 - L1MB8 LINE L1 0 6178 5705 1850 158 0 0 chr5 75129050 75129335 -127956197 + AluSx SINE Alu 21 305 -7 229 319 33 0 chr5 75130415 75130506 -127955026 + MIR SINE MIR 71 164 -98 674 258 0 0 chr5 75130509 75130637 -127954895 + FLAM_C SINE Alu 2 129 -14 199 118 66 0 chr5 75130652 75130728 -127954804 + (TA)n Simple_repeat Simple_repeat 1 81 0 974 124 0 26 chr5 75130743 75130896 -127954636 + FRAM SINE Alu 25 173 -3 192 244 0 0 chr5 75130897 75130938 -127954594 + MIR SINE MIR 152 192 -70 526 233 73 40 chr5 75130938 75131088 -127954444 - L2 LINE L2 0 3313 3159 1318 185 124 33 chr5 75131104 75131439 -127954093 - MLT1A1 LTR MaLR 0 457 1 40 21 0 0 chr5 75131466 75131513 -127954019 + AT_rich Low_complexity Low_complexity 1 47 0 183 167 0 28 chr5 75132305 75132341 -127953191 + MIR SINE MIR 223 257 -5 251 231 145 51 chr5 75133896 75134013 -127951519 - L2 LINE L2 -1 3312 3185 191 233 100 0 chr5 75134111 75134171 -127951361 + MER5A DNA MER1_type 40 105 -84 1797 156 28 0 chr5 75134795 75135077 -127950455 - AluJo SINE Alu -18 294 5 776 157 0 0 chr5 75136189 75136304 -127949228 + FLAM_C SINE Alu 3 117 -26 649 259 125 9 chr5 75136793 75137025 -127948507 + MIR SINE MIR 4 262 0 2245 122 3 0 chr5 75137121 75137433 -127948099 + AluSq SINE Alu 1 313 0 229 372 26 0 chr5 75137569 75137682 -127947850 + L2 LINE L2 3184 3299 -14 2187 129 3 0 chr5 75138968 75139278 -127946254 + AluSx SINE Alu 1 311 -1 507 279 0 14 chr5 75140568 75140708 -127944824 - MARNA DNA Mariner -185 401 264 1267 256 72 55 chr5 75140709 75141236 -127944296 + MLT1F LTR MaLR 7 542 0 182 36 0 36 chr5 75142455 75142483 -127943049 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2043 129 14 0 chr5 75142485 75142772 -127942760 - AluSx SINE Alu -21 291 1 28 0 0 0 chr5 75143691 75143719 -127941813 + AT_rich Low_complexity Low_complexity 1 28 0 318 265 109 41 chr5 75143825 75143972 -127941560 + MIR SINE MIR 65 221 -41 679 273 77 10 chr5 75144125 75144334 -127941198 + MER58A DNA MER1_type 1 223 -1 750 236 22 22 chr5 75144397 75144575 -127940957 - MER45A DNA AcHobo 0 178 1 1012 189 0 6 chr5 75145492 75145672 -127939860 + FRAM SINE Alu 1 174 -2 806 163 31 0 chr5 75145758 75145887 -127939645 + AluJo SINE Alu 2 134 -178 2176 114 0 0 chr5 75146598 75146888 -127938644 + AluSx SINE Alu 1 290 -22 216 0 0 0 chr5 75147162 75147186 -127938346 + (A)n Simple_repeat Simple_repeat 1 24 0 710 278 126 5 chr5 75147230 75147453 -127938079 + MIR SINE MIR 10 259 -3 2139 101 42 0 chr5 75147995 75148282 -127937250 + AluSq SINE Alu 1 299 -14 1487 155 103 0 chr5 75148294 75148546 -127936986 + AluJb SINE Alu 17 294 -18 537 252 0 0 chr5 75148929 75149036 -127936496 + MIR SINE MIR 43 149 -113 1081 132 26 32 chr5 75149194 75149383 -127936149 + MLT1B LTR MaLR 2 189 -201 390 213 9 83 chr5 75149390 75149437 -127936095 + MIR SINE MIR 159 208 -54 1734 118 4 0 chr5 75149437 75149666 -127935866 - MER30 DNA MER1_type 0 230 1 390 213 9 83 chr5 75149666 75149726 -127935806 + MIR SINE MIR 208 258 -4 702 153 0 40 chr5 75149746 75149870 -127935662 + L1PA10 LINE L1 6049 6167 -1 2511 141 2 20 chr5 75149935 75150331 -127935201 - MLT1B LTR MaLR 0 390 2 465 227 178 20 chr5 75150536 75150786 -127934746 + MLT2E LTR ERVL 239 615 -13 30 27 0 0 chr5 75150805 75150842 -127934690 + AT_rich Low_complexity Low_complexity 1 37 0 409 233 48 97 chr5 75151038 75151266 -127934266 + HAL1 LINE L1 1809 2025 -482 3619 155 19 32 chr5 75151281 75151673 -127933859 - MER44D DNA MER2_type -1882 605 350 1957 117 0 4 chr5 75151673 75151939 -127933593 - AluSx SINE Alu -11 301 37 3619 155 19 32 chr5 75151939 75152178 -127933354 - MER44D DNA MER2_type -2137 350 110 2253 141 31 8 chr5 75152179 75152534 -127932998 + L1PA13 LINE L1 5793 6155 -8 5162 141 28 1 chr5 75152537 75153358 -127932174 + L1PA16 LINE L1 5315 6157 -9 22 0 0 0 chr5 75153358 75153380 -127932152 + AT_rich Low_complexity Low_complexity 1 22 0 442 210 0 109 chr5 75153383 75153470 -127932062 - MER44D DNA MER2_type -2381 106 34 3691 129 4 4 chr5 75153470 75153981 -127931551 - MER9 LTR ERVK 0 511 1 442 210 0 109 chr5 75153981 75154012 -127931520 - MER44D DNA MER2_type -2453 34 1 226 281 24 0 chr5 75154013 75154095 -127931437 + HAL1 LINE L1 2044 2127 -380 373 283 53 35 chr5 75154646 75154759 -127930773 - MIR SINE MIR -74 134 20 550 297 44 44 chr5 75156041 75156314 -127929218 + L2 LINE L2 3040 3312 -1 3735 267 87 23 chr5 75157035 75158604 -127926928 + L2 LINE L2 1651 3312 -1 642 291 39 6 chr5 75158848 75159030 -127926502 + L3 LINE CR1 926 1113 -464 340 282 141 7 chr5 75159143 75159292 -127926240 - MER117 DNA MER1_type -26 171 3 2007 136 3 0 chr5 75159336 75159650 -127925882 + AluSq SINE Alu 1 315 0 467 290 221 27 chr5 75159651 75159913 -127925619 + L3 LINE CR1 1254 1566 -11 243 211 67 87 chr5 75160887 75160991 -127924541 + MIR SINE MIR 111 212 -50 231 189 0 0 chr5 75163414 75163467 -127922065 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 385 274 62 9 chr5 75163598 75163711 -127921821 - L2 LINE L2 -6 3307 3189 960 211 12 37 chr5 75164449 75164695 -127920837 - L1MA10 LINE L1 -2 6332 6093 830 138 17 0 chr5 75164695 75164811 -127920721 + FLAM_C SINE Alu 1 118 -15 24 32 0 0 chr5 75164811 75164842 -127920690 + AT_rich Low_complexity Low_complexity 1 31 0 227 148 167 19 chr5 75164843 75164897 -127920635 - L1MB1 LINE L1 -83 6106 6045 * 4145 132 148 87 chr5 75164885 75165118 -127920414 - L1MCa LINE L1 -4242 2184 1967 1840 102 4 0 chr5 75165118 75165409 -127920123 - AluSp SINE Alu 0 329 38 4145 132 148 87 chr5 75165409 75166221 -127919311 - L1MCa LINE L1 -4459 1967 1206 203 59 0 29 chr5 75166221 75166255 -127919277 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2032 115 32 0 chr5 75166257 75166536 -127918996 - AluSq SINE Alu -25 288 1 4145 132 148 87 chr5 75166536 75166606 -127918926 - L1MCa LINE L1 -5220 1206 995 593 248 48 0 chr5 75166607 75166752 -127918780 + MLT1A1 LTR MaLR 1 152 -213 30166 57 2 5 chr5 75166758 75171352 -127914180 + L1PA6 LINE L1 1591 6167 0 1016 213 7 11 chr5 75171361 75171564 -127913968 + MLT1A1 LTR MaLR 156 420 -8 4962 153 52 46 chr5 75171569 75172560 -127912972 - L1MCa LINE L1 -5429 997 1 182 31 0 62 chr5 75174366 75174398 -127911134 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 1795 117 43 21 chr5 75174400 75174681 -127910851 - AluSq SINE Alu -26 287 1 246 118 0 39 chr5 75175284 75175335 -127910197 + Alu SINE Alu 258 306 -2 2320 67 0 0 chr5 75175415 75175727 -127909805 - AluY SINE Alu 0 312 1 234 0 0 0 chr5 75176984 75177010 -127908522 + (A)n Simple_repeat Simple_repeat 1 26 0 213 108 0 0 chr5 75177011 75177048 -127908484 + (T)n Simple_repeat Simple_repeat 1 37 0 222 118 0 0 chr5 75177078 75177112 -127908420 + (GAAA)n Simple_repeat Simple_repeat 4 37 0 2252 96 13 0 chr5 75177863 75178166 -127907366 - AluSp SINE Alu -6 307 1 257 291 0 0 chr5 75178166 75178283 -127907249 + T-rich Low_complexity Low_complexity 1 117 0 2215 131 0 0 chr5 75178339 75178644 -127906888 - AluSx SINE Alu -7 305 1 270 209 43 101 chr5 75178727 75178866 -127906666 + L2 LINE L2 3087 3217 -96 351 103 294 0 chr5 75178913 75178981 -127906551 - L2 LINE L2 -5 3308 3221 509 194 20 10 chr5 75179186 75179284 -127906248 + L2 LINE L2 3215 3313 0 918 214 91 29 chr5 75179767 75179977 -127905555 - MER58A DNA MER1_type -1 223 1 447 367 51 14 chr5 75180267 75180621 -127904911 + LTR16B LTR ERVL 20 386 -78 307 259 0 35 chr5 75181466 75181551 -127903981 + GA-rich Low_complexity Low_complexity 3 84 0 336 283 28 19 chr5 75181751 75181857 -127903675 + MIR3 SINE MIR 93 199 -9 574 251 55 0 chr5 75181933 75182096 -127903436 - MLT1J2 LTR MaLR -267 183 12 299 352 31 56 chr5 75182203 75182365 -127903167 + L2 LINE L2 3114 3271 -1 184 342 125 17 chr5 75182443 75182563 -127902969 + L2 LINE L2 2722 2854 -460 229 180 11 45 chr5 75182592 75182681 -127902851 + CT-rich Low_complexity Low_complexity 2 87 0 216 320 40 0 chr5 75182689 75182764 -127902768 - L2 LINE L2 -1 3271 3194 261 279 112 84 chr5 75183513 75183692 -127901840 - MIR3 SINE MIR -22 186 3 2504 81 3 0 chr5 75184419 75184727 -127900805 + AluSp SINE Alu 1 309 -4 769 142 0 25 chr5 75185600 75185720 -127899812 - FLAM_C SINE Alu -15 128 12 1918 146 3 0 chr5 75185736 75186024 -127899508 - AluSg SINE Alu -21 289 1 211 227 15 0 chr5 75186870 75186936 -127898596 + A-rich Low_complexity Low_complexity 4 70 0 643 144 0 0 chr5 75186948 75187038 -127898494 - AluJ/FLAM SINE Alu -221 91 2 2099 108 0 7 chr5 75187352 75187631 -127897901 + AluSp SINE Alu 37 313 0 1961 160 0 13 chr5 75187650 75187962 -127897570 + AluSx SINE Alu 1 308 -4 2252 116 3 0 chr5 75188105 75188408 -127897124 + AluSx SINE Alu 3 306 -6 21 36 0 0 chr5 75188591 75188619 -127896913 + AT_rich Low_complexity Low_complexity 1 28 0 880 45 0 106 chr5 75188736 75188868 -127896664 + L1PA10 LINE L1 6051 6168 0 1454 194 12 115 chr5 75189339 75189421 -127896111 + MLT1A1 LTR MaLR 1 90 -275 1151 118 0 6 chr5 75189421 75189590 -127895942 + L1PB1 LINE L1 5983 6150 -1 1454 194 12 115 chr5 75189590 75189924 -127895608 + MLT1A1 LTR MaLR 90 365 0 220 345 107 60 chr5 75189929 75190408 -127895124 + L2 LINE L2 1712 2212 -1102 501 321 104 13 chr5 75190604 75190912 -127894620 - L2 LINE L2 -1292 2022 1687 684 169 102 0 chr5 75191542 75191660 -127893872 + FLAM_C SINE Alu 2 131 -12 233 0 62 0 chr5 75194818 75194850 -127890682 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1642 170 24 31 chr5 75194859 75195148 -127890384 + AluJb SINE Alu 1 287 -25 1997 218 44 22 chr5 75195280 75195735 -127889797 - MLT1C LTR MaLR 0 467 3 1486 95 42 65 chr5 75196085 75196348 -127889184 - L1MC1 LINE L1 -1 6332 6076 2377 84 0 3 chr5 75196349 75196646 -127888886 - AluY SINE Alu -15 296 1 22 35 0 0 chr5 75197014 75197043 -127888489 + AT_rich Low_complexity Low_complexity 1 29 0 248 288 0 0 chr5 75197371 75197430 -127888102 + MIR SINE MIR 20 78 -184 307 222 0 0 chr5 75197613 75197667 -127887865 - MER96 DNA MER1_type? -84 91 38 248 270 0 90 chr5 75197617 75197706 -127887826 + MER96 DNA MER1_type? 89 169 -6 * 516 263 173 47 chr5 75197706 75198007 -127887525 - LTR16A LTR ERVL -90 360 22 446 253 63 46 chr5 75198009 75198086 -127887446 + L2 LINE L2 3122 3196 -117 2170 64 16 58 chr5 75198086 75198399 -127887133 - AluSq SINE Alu -13 300 1 446 253 63 46 chr5 75198399 75198495 -127887037 + L2 LINE L2 3196 3298 -15 32 91 0 0 chr5 75198658 75198746 -127886786 + AT_rich Low_complexity Low_complexity 1 88 0 522 281 58 40 chr5 75199908 75200132 -127885400 + MIR SINE MIR 9 236 -26 206 250 0 0 chr5 75200149 75200201 -127885331 + (TTA)n Simple_repeat Simple_repeat 2 53 0 383 266 35 35 chr5 75200591 75200704 -127884828 + MIR SINE MIR 31 143 -65 195 129 0 0 chr5 75201398 75201429 -127884103 + (A)n Simple_repeat Simple_repeat 1 31 0 260 70 23 0 chr5 75201590 75201633 -127883899 + (CA)n Simple_repeat Simple_repeat 2 45 0 1938 205 77 56 chr5 75201678 75201770 -127883762 + MLT1E3 LTR MaLR 1 90 -534 2211 153 21 0 chr5 75201770 75202109 -127883423 - MER7A DNA MER2_type -2 344 1 1938 205 77 56 chr5 75202109 75202660 -127882872 + MLT1E3 LTR MaLR 90 624 0 21 57 0 0 chr5 75203096 75203131 -127882401 + AT_rich Low_complexity Low_complexity 1 35 0 2542 131 31 14 chr5 75203155 75203513 -127882019 + THE1B LTR MaLR 1 364 0 407 351 33 0 chr5 75203599 75203750 -127881782 - L2 LINE L2 0 3272 3117 260 210 0 16 chr5 75203759 75203821 -127881711 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 225 0 0 0 chr5 75203842 75203867 -127881665 + (TG)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr5 75203866 75203889 -127881643 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 3848 134 0 17 chr5 75204648 75205184 -127880348 - MER1A DNA MER1_type 0 527 1 232 243 64 93 chr5 75205602 75205742 -127879790 + LTR67 LTR ERVL 5 140 -417 568 342 0 11 chr5 75206841 75207025 -127878507 + MER5A DNA MER1_type 1 182 -7 259 240 125 19 chr5 75207049 75207153 -127878379 - MER5B DNA MER1_type 0 178 64 39493 80 5 12 chr5 75207730 75211819 -127873713 + L1PA6 LINE L1 12 4040 -2162 2416 83 0 13 chr5 75211819 75212132 -127873400 + AluY SINE Alu 1 309 -2 39493 80 5 12 chr5 75212132 75214280 -127871252 + L1PA6 LINE L1 4040 6202 0 180 0 0 0 chr5 75214286 75214306 -127871226 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 227 320 124 42 chr5 75216206 75216364 -127869168 + MER5A DNA MER1_type 1 185 -4 486 285 71 38 chr5 75216652 75217079 -127868453 - L1ME4a LINE L1 -140 5981 5524 862 182 0 0 chr5 75217079 75217211 -127868321 + FLAM_A SINE Alu 1 132 -1 486 285 71 38 chr5 75217211 75217482 -127868050 - L1ME4a LINE L1 -597 5524 5263 315 326 30 39 chr5 75217737 75217970 -127867562 - L2 LINE L2 -801 2513 2283 1912 93 4 0 chr5 75217996 75218242 -127867290 - AluSq SINE Alu -18 295 49 371 256 47 0 chr5 75218722 75218808 -127866724 - MIR SINE MIR -121 141 52 206 292 0 0 chr5 75218843 75218891 -127866641 - L2 LINE L2 -1035 2279 2232 2499 161 26 26 chr5 75218971 75219399 -127866133 + MSTB2 LTR MaLR 26 453 -4 703 209 0 0 chr5 75219404 75219519 -127866013 + MER45A DNA AcHobo 64 178 0 897 135 0 0 chr5 75220636 75220762 -127864770 - FLAM_C SINE Alu -17 126 1 306 283 226 13 chr5 75220786 75220945 -127864587 - MIR SINE MIR -24 238 46 370 245 117 0 chr5 75221047 75221141 -127864391 - MIR SINE MIR -86 176 72 2099 196 2 27 chr5 75222816 75223259 -127862273 + L1ME1 LINE L1 5543 5974 -192 489 191 24 24 chr5 75223276 75223402 -127862130 + L1MA10 LINE L1 6206 6331 -3 2521 63 7 0 chr5 75224312 75224613 -127860919 + AluY SINE Alu 1 303 -8 582 250 217 9 chr5 75224749 75224961 -127860571 - MIR SINE MIR -5 257 2 245 278 6 87 chr5 75226071 75226244 -127859288 + L1M4 LINE L1 4270 4428 -1718 601 235 0 17 chr5 75226471 75226627 -127858905 - FLAM_A SINE Alu 0 154 1 432 261 42 29 chr5 75226910 75227151 -127858381 + L1M4 LINE L1 5065 5308 -838 10739 205 88 5 chr5 75227164 75230142 -127855390 + L1PA13 LINE L1 1 3238 -3559 1971 192 3 3 chr5 75230112 75230502 -127855030 + L1P LINE L1 4989 5378 -1419 * 2599 91 11 17 chr5 75230502 75230863 -127854669 + THE1B LTR MaLR 6 364 0 3942 149 46 3 chr5 75230865 75231561 -127853971 + L1P LINE L1 4636 5361 -785 254 113 0 19 chr5 75231578 75231631 -127853901 + (TC)n Simple_repeat Simple_repeat 2 53 0 261 57 0 0 chr5 75231631 75231666 -127853866 + (CA)n Simple_repeat Simple_repeat 1 35 0 193 363 35 9 chr5 75231690 75231803 -127853729 - MER5A DNA MER1_type -6 183 68 * 273 314 26 39 chr5 75231707 75231809 -127853723 + MER5A DNA MER1_type 36 137 -52 2246 120 0 0 chr5 75231809 75232110 -127853422 + AluSx SINE Alu 1 301 -11 273 314 26 39 chr5 75232110 75232160 -127853372 + MER5A DNA MER1_type 137 186 -3 2292 95 3 16 chr5 75232981 75233285 -127852247 + AluSq SINE Alu 1 300 -13 308 302 0 0 chr5 75233525 75233621 -127851911 - MIR SINE MIR -77 185 90 2521 58 10 0 chr5 75233941 75234249 -127851283 - AluY SINE Alu 0 311 1 297 0 0 0 chr5 75235592 75235625 -127849907 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 697 147 17 9 chr5 75235945 75236061 -127849471 + MLT1C LTR MaLR 351 467 0 1236 98 0 0 chr5 75236233 75236386 -127849146 + AluSg SINE Alu 1 153 -157 1889 177 26 67 chr5 75236526 75236673 -127848859 + MER65A LTR ERV1 1 153 -292 2297 60 11 7 chr5 75236673 75236978 -127848554 + AluY SINE Alu 1 306 0 1889 177 26 67 chr5 75236978 75237292 -127848240 + MER65A LTR ERV1 153 444 -1 436 229 8 16 chr5 75240101 75240223 -127845309 - AluJb SINE Alu -190 122 2 2195 120 0 3 chr5 75240226 75240518 -127845014 - AluSx SINE Alu -21 291 1 44 20 0 0 chr5 75240519 75240570 -127844962 + AT_rich Low_complexity Low_complexity 1 51 0 185 215 27 0 chr5 75240573 75240722 -127844810 + (TA)n Simple_repeat Simple_repeat 2 154 0 58 15 0 0 chr5 75240722 75240787 -127844745 + AT_rich Low_complexity Low_complexity 1 65 0 3557 198 29 59 chr5 75245809 75246799 -127838733 + LTR5 LTR ERVK 9 969 0 300 263 34 59 chr5 75246823 75246941 -127838591 + MIR SINE MIR 126 240 -22 30 45 0 0 chr5 75247094 75247138 -127838394 + AT_rich Low_complexity Low_complexity 1 44 0 2108 110 3 3 chr5 75247718 75248027 -127837505 + AluY SINE Alu 1 309 -2 1422 131 56 0 chr5 75248249 75248501 -127837031 + AluJb SINE Alu 23 288 -24 2245 112 0 0 chr5 75248623 75248918 -127836614 + AluSq SINE Alu 1 295 -18 1018 155 17 0 chr5 75249153 75249327 -127836205 - AluSg/x SINE Alu -7 305 129 2024 246 79 17 chr5 75250082 75250716 -127834816 + L2 LINE L2 1651 2323 -991 584 205 16 25 chr5 75251009 75251131 -127834401 - MER2 DNA MER2_type -223 122 2 771 269 63 8 chr5 75251258 75251496 -127834036 - MIR SINE MIR 0 262 12 2180 99 7 20 chr5 75251991 75252294 -127833238 - AluSp SINE Alu -14 299 1 791 302 33 12 chr5 75252294 75252539 -127832993 + MIR SINE MIR 8 257 -5 390 115 0 0 chr5 75252540 75252601 -127832931 + (CAT)n Simple_repeat Simple_repeat 1 61 0 258 154 0 0 chr5 75252913 75252952 -127832580 + L2 LINE L2 3217 3255 -17 2286 108 7 0 chr5 75253447 75253753 -127831779 + AluSx SINE Alu 1 308 -4 1707 131 0 0 chr5 75254041 75254286 -127831246 - AluSg SINE Alu -65 245 1 5830 153 23 39 chr5 75254530 75255321 -127830211 - L1PA16 LINE L1 -1 6165 5362 2211 125 0 0 chr5 75255321 75255624 -127829908 - AluSx SINE Alu -9 303 1 5830 153 23 39 chr5 75255624 75255687 -127829845 - L1PA16 LINE L1 -804 5362 5299 4207 51 0 0 chr5 75255687 75256173 -127829359 - L1PA7 LINE L1 0 6154 5669 5830 153 23 39 chr5 75256173 75257351 -127828181 - L1PA16 LINE L1 -867 5299 4129 2061 140 7 0 chr5 75257351 75257644 -127827888 - AluSx SINE Alu -17 295 1 297 0 0 0 chr5 75257687 75257720 -127827812 + (A)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr5 75257890 75257911 -127827621 + AT_rich Low_complexity Low_complexity 1 21 0 1141 212 10 47 chr5 75257911 75258208 -127827324 + MER93b LTR ERV1 1 286 -87 437 343 35 38 chr5 75258333 75258677 -127826855 - L1M4 LINE L1 -1082 5064 4722 213 108 0 0 chr5 75259426 75259463 -127826069 + (GA)n Simple_repeat Simple_repeat 1 37 0 1507 207 16 75 chr5 75259472 75259705 -127825827 - MLT1A1 LTR MaLR -1 364 162 1921 109 22 0 chr5 75259705 75259972 -127825560 - AluSp SINE Alu -14 299 27 1507 207 16 75 chr5 75259972 75260125 -127825407 - MLT1A1 LTR MaLR -203 162 1 540 221 18 18 chr5 75260327 75260440 -127825092 + MER81 DNA DNA 1 113 -1 690 255 188 44 chr5 75260915 75261187 -127824345 - L1MC4a LINE L1 -1885 5923 5691 2177 127 0 3 chr5 75261187 75261487 -127824045 - AluSx SINE Alu -13 299 1 690 255 188 44 chr5 75261487 75261646 -127823886 - L1MC4a LINE L1 -2117 5691 5556 1927 136 3 17 chr5 75261646 75261977 -127823555 - AluSx SINE Alu 0 312 1 690 255 188 44 chr5 75261977 75262129 -127823403 - L1MC4a LINE L1 -2252 5556 5255 1981 141 7 10 chr5 75262391 75262689 -127822843 + AluJb SINE Alu 3 299 -13 21 36 0 0 chr5 75262737 75262765 -127822767 + AT_rich Low_complexity Low_complexity 1 28 0 467 312 65 15 chr5 75263955 75264154 -127821378 - MIR SINE MIR -30 232 24 2370 129 64 32 chr5 75264365 75264880 -127820652 - MLT2A2 LTR ERVL 0 554 1 387 224 41 0 chr5 75265085 75265183 -127820349 - MIR3 SINE MIR -10 198 97 597 309 27 27 chr5 75265378 75265601 -127819931 - MIR SINE MIR -20 242 20 228 163 0 0 chr5 75266470 75266513 -127819019 + (CA)n Simple_repeat Simple_repeat 1 43 0 307 230 151 14 chr5 75266686 75266797 -127818735 + L1 LINE L1 2895 2989 -3157 1648 208 8 39 chr5 75266797 75267181 -127818351 - MER93b LTR ERV1 -1 372 1 307 230 151 14 chr5 75267181 75267334 -127818198 + L1 LINE L1 2989 3199 -2947 306 0 0 0 chr5 75267371 75267405 -127818127 + (T)n Simple_repeat Simple_repeat 1 34 0 630 181 0 0 chr5 75267449 75267554 -127817978 + AluSq/x SINE Alu 2 106 -207 209 340 44 100 chr5 75267951 75268222 -127817310 - L2 LINE L2 -814 2500 2245 2250 123 0 0 chr5 75269050 75269358 -127816174 - AluSx SINE Alu -4 308 1 200 318 0 16 chr5 75269536 75269662 -127815870 + (CATATA)n Simple_repeat Simple_repeat 3 126 0 294 320 0 0 chr5 75270188 75270266 -127815266 - MIR SINE MIR -75 187 110 199 300 103 80 chr5 75271776 75272126 -127813406 - L2 LINE L2 -2289 1025 668 1793 184 3 0 chr5 75272523 75272827 -127812705 - AluJo SINE Alu -7 305 1 893 244 86 48 chr5 75273225 75273622 -127811910 + HAL1 LINE L1 2044 2455 -52 2344 92 0 7 chr5 75273687 75273990 -127811542 + AluY SINE Alu 1 301 -10 2194 125 0 0 chr5 75274221 75274525 -127811007 + AluSg SINE Alu 1 304 -6 525 274 41 20 chr5 75275066 75275263 -127810269 - L1ME3A LINE L1 -285 5885 5685 483 171 12 200 chr5 75275336 75275428 -127810104 + MER5A DNA MER1_type 50 97 -92 1895 130 4 7 chr5 75275428 75275704 -127809828 - AluSx SINE Alu -1 311 37 483 171 12 200 chr5 75275704 75275781 -127809751 + MER5A DNA MER1_type 97 187 -2 298 289 134 41 chr5 75275808 75276150 -127809382 - L1MDa LINE L1 -3625 2915 2542 2340 97 10 0 chr5 75276206 75276515 -127809017 - AluSx SINE Alu 0 312 1 2292 77 0 13 chr5 75276747 75277047 -127808485 - AluY SINE Alu -2 309 14 369 308 105 6 chr5 75277231 75277565 -127807967 - L1MDa LINE L1 -4550 1990 1624 265 271 31 0 chr5 75277784 75277880 -127807652 - L1MDa LINE L1 -5301 1229 1131 387 73 0 0 chr5 75277894 75277949 -127807583 + (TG)n Simple_repeat Simple_repeat 2 56 0 1987 145 0 16 chr5 75278053 75278356 -127807176 - AluSx SINE Alu -14 298 1 305 317 55 45 chr5 75278877 75278986 -127806546 + L1MC4a LINE L1 5831 5944 -1864 2165 120 0 0 chr5 75278986 75279277 -127806255 + AluSx SINE Alu 6 296 -16 305 317 55 45 chr5 75279277 75279369 -127806163 + L1MC4a LINE L1 5944 6034 -1774 645 216 72 0 chr5 75279592 75279745 -127805787 + MIR SINE MIR 99 262 0 2067 111 3 0 chr5 75279824 75280113 -127805419 - AluSg SINE Alu -20 290 1 263 303 18 9 chr5 75280115 75280224 -127805308 + MIR SINE MIR 45 154 -108 787 204 68 46 chr5 75280262 75280326 -127805206 + L1MC5 LINE L1 7621 7682 -279 1621 179 10 17 chr5 75280326 75280627 -127804905 - AluJb SINE Alu -13 299 1 787 204 68 46 chr5 75280627 75280842 -127804690 + L1MC5 LINE L1 7682 7906 -55 437 246 62 62 chr5 75281670 75281865 -127803667 - HAL1 LINE L1 -1820 687 493 265 250 0 0 chr5 75281971 75282027 -127803505 - L2 LINE L2 -10 3303 3248 207 0 0 0 chr5 75282079 75282102 -127803430 + (A)n Simple_repeat Simple_repeat 1 23 0 2162 109 10 26 chr5 75282315 75282627 -127802905 - AluSx SINE Alu -4 308 2 736 161 158 182 chr5 75282802 75283093 -127802439 + Charlie1a DNA MER1_type 1 284 -1171 446 163 244 0 chr5 75283925 75284011 -127801521 + U6 snRNA snRNA 1 107 0 * 2668 167 113 60 chr5 75284005 75284496 -127801036 + Charlie1a DNA MER1_type 261 724 -2037 806 174 0 0 chr5 75284496 75284617 -127800915 - FLAM_A SINE Alu -12 121 1 2668 167 113 60 chr5 75284617 75284645 -127800887 + Charlie1a DNA MER1_type 724 749 -2012 213 94 0 0 chr5 75284645 75284677 -127800855 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2668 167 113 60 chr5 75284677 75284976 -127800556 + Charlie1a DNA MER1_type 749 1180 -1581 3988 62 4 6 chr5 75284976 75285463 -127800069 - L1PA8 LINE L1 -1 6171 5686 2668 167 113 60 chr5 75285463 75285548 -127799984 + Charlie1a DNA MER1_type 1180 1259 -196 1078 186 17 74 chr5 75285548 75285779 -127799753 + MER20 DNA MER1_type 1 218 -1 2215 116 0 7 chr5 75285963 75286266 -127799266 - AluSx SINE Alu -11 301 1 2483 76 0 0 chr5 75286277 75286578 -127798954 - AluY SINE Alu -10 301 1 1718 205 49 35 chr5 75287077 75287316 -127798216 + MLT1C LTR MaLR 35 284 -183 2444 59 10 3 chr5 75287316 75287619 -127797913 - AluY SINE Alu -6 305 1 1718 205 49 35 chr5 75287619 75287804 -127797728 + MLT1C LTR MaLR 284 465 -2 296 394 12 6 chr5 75287810 75287970 -127797562 - L3 LINE CR1 -59 1518 1358 2230 109 0 13 chr5 75287996 75288309 -127797223 - AluSc SINE Alu 0 309 1 1668 119 4 16 chr5 75339394 75339638 -127745894 + AluSp SINE Alu 57 297 -16 356 190 0 10 chr5 75342540 75342640 -127742892 + GA-rich Low_complexity Low_complexity 1 99 0 204 164 55 18 chr5 75342671 75342726 -127742806 + (CCGGA)n Simple_repeat Simple_repeat 2 58 0 191 81 81 27 chr5 75342749 75342823 -127742709 + (CGACG)n Simple_repeat Simple_repeat 2 79 0 323 71 82 0 chr5 75345012 75345097 -127740435 + (TA)n Simple_repeat Simple_repeat 1 92 0 1407 121 5 0 chr5 75345097 75345295 -127740237 - AluSg/x SINE Alu -10 302 104 2223 102 0 16 chr5 75345336 75345639 -127739893 + AluSq SINE Alu 1 298 -15 1230 159 44 24 chr5 75345639 75345890 -127739642 - MLT1B LTR MaLR -134 256 1 253 299 56 28 chr5 75352298 75352405 -127733127 - L2 LINE L2 -43 3270 3161 2049 152 71 0 chr5 75352442 75352765 -127732767 - MER7A DNA MER2_type -1 345 2 2404 95 3 7 chr5 75352854 75353160 -127732372 - AluSx SINE Alu -7 305 1 571 171 92 7 chr5 75353249 75353401 -127732131 + L1M1 LINE L1 3353 3517 -4048 2684 223 159 9 chr5 75353942 75354677 -127730855 + L1 LINE L1 23 867 -6342 * 2794 167 8 6 chr5 75354674 75355182 -127730350 + L1 LINE L1 5588 6096 -1112 387 221 29 10 chr5 75355659 75355763 -127729769 - MIR SINE MIR -72 190 85 2098 107 7 10 chr5 75356185 75356484 -127729048 - AluSx SINE Alu -14 298 1 625 293 80 92 chr5 75356626 75357061 -127728471 - L2 LINE L2 -64 3208 2769 649 296 6 11 chr5 75357061 75357240 -127728292 + MER5B DNA MER1_type 1 178 0 625 293 80 92 chr5 75357240 75357420 -127728112 - L2 LINE L2 -503 2769 2588 2227 122 0 0 chr5 75357420 75357724 -127727808 - AluSq SINE Alu -9 304 1 625 293 80 92 chr5 75357724 75358003 -127727529 - L2 LINE L2 -684 2588 2333 203 182 0 23 chr5 75358093 75358137 -127727395 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2243 121 0 3 chr5 75358323 75358630 -127726902 - AluSx SINE Alu -6 306 1 23 0 0 0 chr5 75359329 75359352 -127726180 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 75359368 75359391 -127726141 + AT_rich Low_complexity Low_complexity 1 23 0 966 161 7 0 chr5 75360376 75360525 -127725007 - AluSq SINE Alu -160 153 4 843 171 0 0 chr5 75360591 75360714 -127724818 - MER58B DNA MER1_type 0 341 219 225 250 0 0 chr5 75360730 75360782 -127724750 - MER58B DNA MER1_type -287 54 3 471 239 277 13 chr5 75360783 75360938 -127724594 + MIR SINE MIR 16 211 -51 21 0 0 0 chr5 75361215 75361236 -127724296 + AT_rich Low_complexity Low_complexity 1 21 0 2176 107 3 7 chr5 75361248 75361537 -127723995 - AluSx SINE Alu -24 288 1 2196 103 3 7 chr5 75362116 75362408 -127723124 - AluSg SINE Alu -19 291 1 968 136 29 0 chr5 75362438 75362578 -127722954 - FRAM SINE Alu -21 155 12 314 256 75 90 chr5 75362579 75362712 -127722820 + MIR3 SINE MIR 30 160 -48 211 311 111 76 chr5 75362942 75363145 -127722387 + MIR SINE MIR 2 206 -56 1909 158 3 3 chr5 75363156 75363460 -127722072 - AluJb SINE Alu 0 312 9 394 240 0 78 chr5 75364939 75365068 -127720464 + MER91B DNA MER1_type 4 122 -68 539 170 0 0 chr5 75365175 75365269 -127720263 - L1MA10 LINE L1 -13 6321 6228 500 241 22 88 chr5 75365271 75365510 -127720022 - L1ME2 LINE L1 -124 6042 5822 180 0 0 0 chr5 75365792 75365812 -127719720 + (T)n Simple_repeat Simple_repeat 1 20 0 200 122 0 24 chr5 75365862 75365903 -127719629 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1800 246 10 2 chr5 75365905 75366300 -127719232 - L1ME2 LINE L1 -343 5823 5426 1807 162 31 52 chr5 75366356 75366739 -127718793 + THE1C LTR MaLR 1 375 0 2615 161 48 4 chr5 75366778 75367276 -127718256 - L1MB4 LINE L1 -1 6179 5660 475 165 0 0 chr5 75367277 75367355 -127718177 - L1ME2 LINE L1 -733 5433 5353 1490 171 3 74 chr5 75367355 75367526 -127718006 - AluJo SINE Alu -15 297 156 2345 101 3 0 chr5 75367526 75367833 -127717699 - AluY SINE Alu -2 309 2 1490 171 3 74 chr5 75367833 75367971 -127717561 - AluJo SINE Alu -156 156 10 1305 223 15 7 chr5 75367991 75368260 -127717272 - AluJb SINE Alu -41 271 1 1164 204 67 58 chr5 75368261 75368412 -127717120 - L1ME2 LINE L1 -780 5366 5218 2178 134 0 0 chr5 75368412 75368702 -127716830 + AluSg SINE Alu 3 292 -18 1164 204 67 58 chr5 75368702 75368995 -127716537 - L1ME2 LINE L1 -928 5218 4918 180 279 0 0 chr5 75369188 75369231 -127716301 - L2 LINE L2 -21 3251 3209 2287 141 33 30 chr5 75369694 75370057 -127715475 - THE1B LTR MaLR 0 364 1 10236 104 81 1 chr5 75370057 75371520 -127714012 - THE1B-int LTR MaLR 0 1580 1 2293 129 36 33 chr5 75371520 75371883 -127713649 - THE1B LTR MaLR 0 364 1 581 301 54 5 chr5 75372330 75372516 -127713016 + Charlie8 DNA MER1_type 70 264 -2153 799 253 6 6 chr5 75372562 75372740 -127712792 - MER5B DNA MER1_type 0 178 1 600 253 152 0 chr5 75372748 75372906 -127712626 - MER5A DNA MER1_type -1 188 7 252 250 208 30 chr5 75373115 75373283 -127712249 + Tigger8 DNA MER2_type 46 243 -423 722 218 103 13 chr5 75373319 75373475 -127712057 - MER5A DNA MER1_type -1 188 19 26 30 0 0 chr5 75373575 75373608 -127711924 + AT_rich Low_complexity Low_complexity 1 33 0 283 219 57 65 chr5 75373610 75373733 -127711799 + Tigger8 DNA MER2_type 227 348 -318 322 288 30 15 chr5 75373796 75373928 -127711604 + Tigger8 DNA MER2_type 453 586 -80 218 138 0 69 chr5 75374760 75374818 -127710714 + (CCCCCG)n Simple_repeat Simple_repeat 6 59 0 395 279 150 80 chr5 75375312 75375883 -127709649 - L1M2 LINE L1 -5500 1349 715 246 136 0 0 chr5 75377478 75377522 -127708010 + (TG)n Simple_repeat Simple_repeat 1 44 0 743 201 86 11 chr5 75379719 75379893 -127705639 + MIR SINE MIR 68 254 -8 479 278 56 25 chr5 75379905 75380067 -127705465 - MIR SINE MIR -19 243 77 1858 173 144 0 chr5 75380764 75381110 -127704422 + MSTD LTR MaLR 1 396 0 217 301 154 42 chr5 75382705 75382848 -127702684 + MIR SINE MIR 17 175 -87 238 239 0 0 chr5 75382849 75382920 -127702612 - L1MC4 LINE L1 -1358 6684 6614 414 0 0 0 chr5 75382975 75383021 -127702511 + (CAT)n Simple_repeat Simple_repeat 2 47 0 245 217 101 0 chr5 75387149 75387175 -127698357 - MER46A DNA MER2_type -60 176 144 1016 182 124 0 chr5 75387175 75387384 -127698148 + MER46A DNA MER2_type 2 236 0 354 293 182 29 chr5 75389921 75390228 -127695304 + L2 LINE L2 2920 3273 -40 26 30 0 0 chr5 75394938 75394971 -127690561 + AT_rich Low_complexity Low_complexity 1 33 0 2116 117 7 0 chr5 75394973 75395300 -127690232 + AluSx SINE Alu 1 329 0 246 270 32 71 chr5 75395705 75395725 -127689807 - MIR SINE MIR -24 238 219 2095 121 24 0 chr5 75395725 75396022 -127689510 - AluSx SINE Alu -8 304 1 246 270 32 71 chr5 75396022 75396093 -127689439 - MIR SINE MIR -43 219 150 2339 64 0 0 chr5 75396093 75396401 -127689131 - AluY SINE Alu 0 308 1 246 270 32 71 chr5 75396401 75396433 -127689099 - MIR SINE MIR -112 150 118 183 205 0 0 chr5 75399225 75399264 -127686268 + (TA)n Simple_repeat Simple_repeat 2 40 0 553 282 110 5 chr5 75399304 75399513 -127686019 - MIR SINE MIR -28 234 4 217 159 32 0 chr5 75399931 75399994 -127685538 + (TA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr5 75400603 75400632 -127684900 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 329 309 188 19 chr5 75401386 75401593 -127683939 - MIR SINE MIR -17 245 4 200 246 18 18 chr5 75403531 75403588 -127681944 + L2 LINE L2 3208 3264 -8 25 0 0 0 chr5 75404354 75404379 -127681153 + GC_rich Low_complexity Low_complexity 1 25 0 284 265 153 10 chr5 75405372 75405470 -127680062 + MIR3 SINE MIR 57 168 -40 21 0 0 0 chr5 75405498 75405519 -127680013 + AT_rich Low_complexity Low_complexity 1 21 0 383 342 33 11 chr5 75405576 75405760 -127679772 + L3b LINE CR1 1178 1365 -218 2159 110 7 3 chr5 75406155 75406455 -127679077 - AluSq SINE Alu -12 301 1 1355 38 0 0 chr5 75406464 75406624 -127678908 - AluY SINE Alu -10 301 142 224 77 26 0 chr5 75407164 75407203 -127678329 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 1284 155 99 0 chr5 75407206 75407419 -127678113 - AluJb SINE Alu -78 234 1 892 171 0 0 chr5 75407419 75407565 -127677967 - AluJb SINE Alu -11 301 156 1864 136 49 7 chr5 75407837 75408123 -127677409 - AluSx SINE Alu -14 298 1 212 327 65 37 chr5 75409781 75409888 -127675644 - L2 LINE L2 -19 3294 3185 22 35 0 0 chr5 75411073 75411102 -127674430 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr5 75411249 75411278 -127674254 + AT_rich Low_complexity Low_complexity 1 29 0 226 269 0 0 chr5 75414190 75414242 -127671290 - L3b LINE CR1 0 1583 1532 2392 79 0 3 chr5 75416065 75416369 -127669163 - AluY SINE Alu -7 304 2 729 196 184 24 chr5 75418927 75419182 -127666350 + MER33 DNA MER1_type 5 300 -24 467 274 69 44 chr5 75419742 75419946 -127665586 + MIR SINE MIR 54 262 0 340 307 99 10 chr5 75420365 75420557 -127664975 + MIR SINE MIR 13 221 -41 371 289 28 35 chr5 75421088 75421230 -127664302 - MIR3 SINE MIR -9 199 59 337 246 0 64 chr5 75422219 75422329 -127663203 + L1MC4 LINE L1 6604 6706 -1336 329 222 22 33 chr5 75422279 75422369 -127663163 - L1MC4 LINE L1 -1339 6703 6615 * 453 286 3 0 chr5 75422370 75422700 -127662832 + (TA)n Simple_repeat Simple_repeat 1 331 0 579 260 0 0 chr5 75422711 75423008 -127662524 + (TA)n Simple_repeat Simple_repeat 1 297 0 332 315 0 0 chr5 75423017 75423109 -127662423 + L1MC4 LINE L1 6614 6705 -1337 * 355 250 23 0 chr5 75423063 75423151 -127662381 - L1MC4 LINE L1 -1339 6703 6614 582 281 124 14 chr5 75424300 75424517 -127661015 + MIR SINE MIR 10 250 -12 202 229 133 12 chr5 75424623 75424706 -127660826 + MIR3 SINE MIR 9 101 -107 462 148 10 59 chr5 75425003 75425104 -127660428 + MER5A DNA MER1_type 9 104 -85 853 235 29 33 chr5 75425349 75425621 -127659911 - MLT1A2 LTR MaLR -103 271 1 266 265 59 24 chr5 75425628 75425798 -127659734 + L1MC4 LINE L1 7867 8042 0 255 258 208 25 chr5 75426647 75426767 -127658765 + MIR SINE MIR 72 213 -49 585 288 95 21 chr5 75427930 75428173 -127657359 - MIR SINE MIR 0 262 2 25 31 0 0 chr5 75430804 75430836 -127654696 + AT_rich Low_complexity Low_complexity 1 32 0 376 252 39 10 chr5 75431012 75431115 -127654417 - MER5A DNA MER1_type -55 134 29 631 243 101 0 chr5 75431426 75431615 -127653917 - MER3 DNA MER1_type 0 209 2 2048 150 3 10 chr5 75431872 75432185 -127653347 + AluJb SINE Alu 1 311 -1 715 267 77 17 chr5 75432711 75433071 -127652461 - MER115 DNA AcHobo -3 690 237 182 250 71 0 chr5 75433461 75433517 -127652015 - L2 LINE L2 -3 3269 3210 244 325 0 0 chr5 75434332 75434409 -127651123 + CT-rich Low_complexity Low_complexity 2 78 0 694 189 91 7 chr5 75434449 75434592 -127650940 + MER63 DNA MER1_type 1 781 -55 21 0 0 0 chr5 75435420 75435441 -127650091 + AT_rich Low_complexity Low_complexity 1 21 0 199 303 0 15 chr5 75435500 75435566 -127649966 + L3b LINE CR1 1286 1350 -233 21 0 0 0 chr5 75435599 75435620 -127649912 + AT_rich Low_complexity Low_complexity 1 21 0 1091 178 13 44 chr5 75436090 75436315 -127649217 - MER20 DNA MER1_type 0 219 2 284 312 110 40 chr5 75436751 75436924 -127648608 - L2 LINE L2 -5 3267 3083 1122 171 101 92 chr5 75438500 75438567 -127646965 - MLT1B LTR MaLR 0 390 325 2136 103 0 24 chr5 75438567 75438859 -127646673 + AluSg SINE Alu 1 285 -25 1122 171 101 92 chr5 75438859 75439137 -127646395 - MLT1B LTR MaLR -65 325 42 277 262 66 16 chr5 75439210 75439332 -127646200 + MER20B DNA MER1_type 62 189 -594 188 310 76 38 chr5 75443583 75443741 -127641791 - MIR3 SINE MIR -42 166 3 389 270 30 10 chr5 75444350 75444450 -127641082 - MER91A DNA MER1_type -92 104 3 189 344 100 0 chr5 75444726 75444816 -127640716 - MIR SINE MIR -61 201 103 300 324 134 39 chr5 75447229 75447408 -127638124 + MIR3 SINE MIR 4 199 -9 183 129 0 0 chr5 75448393 75448424 -127637108 + (CCGAG)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr5 75449640 75449667 -127635865 + (A)n Simple_repeat Simple_repeat 1 27 0 460 161 54 0 chr5 75452818 75452911 -127632621 + L1MC1 LINE L1 6236 6333 0 1839 19 14 0 chr5 75454627 75454835 -127630697 + L1PA2 LINE L1 5945 6155 0 427 272 38 67 chr5 75456951 75457164 -127628368 - MIR SINE MIR -6 256 51 975 154 0 0 chr5 75461195 75461364 -127624168 + (TA)n Simple_repeat Simple_repeat 1 169 0 2434 44 0 20 chr5 75461874 75462167 -127623365 - AluY SINE Alu -24 287 1 481 261 71 71 chr5 75462752 75462978 -127622554 + LTR33A LTR ERVL 225 450 -73 383 264 138 12 chr5 75463071 75463238 -127622294 - MIR SINE MIR -74 188 1 946 184 78 34 chr5 75463403 75463582 -127621950 + MER5A DNA MER1_type 1 187 -2 304 313 91 45 chr5 75463693 75463869 -127621663 + MIR3 SINE MIR 16 199 -9 280 326 170 37 chr5 75465026 75465244 -127620288 - L2 LINE L2 -4 3268 3022 249 155 0 69 chr5 75465624 75465682 -127619850 + MER5B DNA MER1_type 7 60 -118 189 268 61 37 chr5 75465701 75465783 -127619749 + MIR SINE MIR 177 260 -2 22 35 0 0 chr5 75465900 75465929 -127619603 + AT_rich Low_complexity Low_complexity 1 29 0 1360 170 25 69 chr5 75467272 75467590 -127617942 + MER63 DNA MER1_type 753 1056 -4 29 28 0 0 chr5 75467892 75467928 -127617604 + AT_rich Low_complexity Low_complexity 1 36 0 320 274 66 46 chr5 75468267 75468526 -127617006 + L1MEd LINE L1 942 1205 -4914 819 143 0 57 chr5 75468677 75468817 -127616715 + FLAM_A SINE Alu 1 132 -1 270 0 0 0 chr5 75469747 75469777 -127615755 + (TG)n Simple_repeat Simple_repeat 2 31 0 501 320 197 5 chr5 75470472 75470675 -127614857 - MIR SINE MIR -19 243 2 502 291 55 85 chr5 75470973 75471347 -127614185 - MLT1J LTR MaLR -25 590 110 248 226 38 0 chr5 75472286 75472339 -127613193 + MLT1F LTR MaLR 12 66 -476 1401 220 30 7 chr5 75472377 75472672 -127612860 + MLT1F LTR MaLR 199 500 -42 314 312 20 68 chr5 75472675 75472892 -127612640 - MIR3 SINE MIR -40 168 2 274 325 135 0 chr5 75473712 75473838 -127611694 - MIR3 SINE MIR -9 199 57 2713 151 31 13 chr5 75474003 75474452 -127611080 + LTR32 LTR ERVL 13 469 -2 423 227 174 8 chr5 75474499 75474631 -127610901 + MIR SINE MIR 105 258 -4 621 236 74 14 chr5 75474729 75474877 -127610655 - MER5A DNA MER1_type 0 189 33 2233 121 7 0 chr5 75474921 75475218 -127610314 - AluSq SINE Alu -14 299 1 182 204 0 20 chr5 75476164 75476213 -127609319 + GA-rich Low_complexity Low_complexity 4 51 0 21 0 0 0 chr5 75476213 75476234 -127609298 + AT_rich Low_complexity Low_complexity 1 21 0 2516 153 23 67 chr5 75476306 75476606 -127608926 + LTR32 LTR ERVL 15 288 -183 1659 182 17 17 chr5 75476606 75476897 -127608635 - AluJo SINE Alu -21 291 1 2516 153 23 67 chr5 75476897 75477072 -127608460 + LTR32 LTR ERVL 288 469 -2 532 167 377 7 chr5 75477372 75477510 -127608022 + MER5A DNA MER1_type 1 189 0 282 289 176 6 chr5 75477557 75477716 -127607816 - MER5A DNA MER1_type 0 189 4 644 241 124 33 chr5 75478191 75478465 -127607067 + LTR37A LTR ERV1 102 400 -26 1588 220 92 16 chr5 75478513 75478936 -127606596 + MLT1D LTR MaLR 1 455 -50 194 275 43 14 chr5 75479313 75479382 -127606150 - MIR SINE MIR -106 156 86 1692 201 77 0 chr5 75479633 75479972 -127605560 - MLT1A1 LTR MaLR 0 365 1 306 0 0 0 chr5 75480919 75480953 -127604579 + (TC)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr5 75480952 75480985 -127604547 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 354 172 30 10 chr5 75481140 75481239 -127604293 + CT-rich Low_complexity Low_complexity 1 101 0 1961 137 7 17 chr5 75481240 75481540 -127603992 - AluJo SINE Alu -15 297 1 246 146 0 0 chr5 75481560 75481608 -127603924 - HAL1 LINE L1 0 2507 2460 624 274 4 72 chr5 75481609 75481846 -127603686 - MIR SINE MIR -1 261 41 930 220 6 12 chr5 75481851 75482024 -127603508 + FAM SINE Alu 4 175 0 201 74 0 0 chr5 75482086 75482113 -127603419 + (CA)n Simple_repeat Simple_repeat 1 27 0 817 192 108 181 chr5 75482114 75482620 -127602912 - HAL1 LINE L1 -100 2407 1872 618 167 10 0 chr5 75482620 75482722 -127602810 - AluJb SINE Alu -19 293 191 817 192 108 181 chr5 75482722 75482923 -127602609 - HAL1 LINE L1 -635 1872 1658 7625 47 13 9 chr5 75482943 75484440 -127601092 - SVA Other Other -839 1386 1 312 295 74 102 chr5 75484440 75484725 -127600807 - HAL1 LINE L1 -2087 420 144 336 179 0 0 chr5 75485187 75485265 -127600267 + GA-rich Low_complexity Low_complexity 1 78 0 845 184 0 11 chr5 75485278 75485457 -127600075 + GA-rich Low_complexity Low_complexity 2 178 0 234 0 0 0 chr5 75485675 75485701 -127599831 + (A)n Simple_repeat Simple_repeat 1 26 0 2112 143 0 0 chr5 75485754 75486055 -127599477 + AluSx SINE Alu 2 302 -10 889 184 56 15 chr5 75486179 75486375 -127599157 - MIR SINE MIR 0 262 59 478 252 45 26 chr5 75486834 75486989 -127598543 + MIR SINE MIR 105 262 0 461 264 135 6 chr5 75488153 75488316 -127597216 - MIR SINE MIR -18 244 61 199 219 0 0 chr5 75488350 75488391 -127597141 + L2 LINE L2 3264 3304 -9 4785 107 2 5 chr5 75488393 75489031 -127596501 + L1PA13 LINE L1 5526 6161 -2 353 312 39 13 chr5 75489988 75490142 -127595390 + MARNA DNA Mariner 42 199 -387 401 298 178 0 chr5 75490262 75490487 -127595045 + MARNA DNA Mariner 199 463 -123 258 32 0 0 chr5 75490544 75490575 -127594957 + (CA)n Simple_repeat Simple_repeat 2 32 0 2070 199 29 63 chr5 75491092 75491615 -127593917 + MLT1D LTR MaLR 1 505 0 1085 190 46 0 chr5 75491699 75491915 -127593617 + L1MB4 LINE L1 5954 6179 -1 207 250 0 0 chr5 75491992 75492036 -127593496 - MER5A DNA MER1_type -133 56 13 258 270 0 0 chr5 75492678 75492741 -127592791 + L3 LINE CR1 1328 1390 -187 524 140 0 21 chr5 75492752 75492845 -127592687 - MIR SINE MIR -96 166 76 514 307 0 7 chr5 75492901 75493054 -127592478 - LTR16C LTR ERVL 0 491 340 1713 144 3 63 chr5 75494442 75494761 -127590771 - AluJb SINE Alu -12 300 1 836 258 45 56 chr5 75495123 75495460 -127590072 - MLT1K LTR MaLR -3 585 253 451 320 77 43 chr5 75495480 75495780 -127589752 - MLT1I LTR MaLR 0 409 100 301 292 62 28 chr5 75495822 75495966 -127589566 - MLT1K LTR MaLR -333 255 107 2091 191 57 65 chr5 75496364 75496873 -127588659 + MLT1D LTR MaLR 1 505 0 379 229 166 63 chr5 75498153 75498328 -127587204 - MIR SINE MIR -6 256 64 364 274 139 51 chr5 75498892 75499112 -127586420 - MIR SINE MIR -20 242 5 29 0 0 0 chr5 75499133 75499162 -127586370 + AT_rich Low_complexity Low_complexity 1 29 0 556 253 129 21 chr5 75499737 75499970 -127585562 + MIR SINE MIR 3 260 -2 233 286 17 59 chr5 75500168 75500287 -127585245 + MER5A DNA MER1_type 7 120 -69 2363 99 0 0 chr5 75500548 75500852 -127584680 - AluSg SINE Alu -6 304 1 1353 152 107 18 chr5 75500892 75501319 -127584213 + LTR54 LTR ERV1 1 510 0 230 317 19 56 chr5 75501903 75502064 -127583468 + MIR SINE MIR 57 211 -51 531 251 19 21 chr5 75502097 75502263 -127583269 + MER34 LTR ERV1 1 243 -411 383 261 107 79 chr5 75502313 75502566 -127582966 + LTR48B LTR ERV1 385 644 0 357 229 246 6 chr5 75503959 75504102 -127581430 + MER5A DNA MER1_type 4 187 -2 180 316 0 0 chr5 75505345 75505383 -127580149 - L2 LINE L2 -85 3228 3191 199 104 0 42 chr5 75505857 75505886 -127579646 + (TTTTC)n Simple_repeat Simple_repeat 4 32 -17 3360 148 42 15 chr5 75505886 75506481 -127579051 - L1MC2 LINE L1 0 6344 5734 199 104 0 42 chr5 75506481 75506499 -127579033 + (TTTTC)n Simple_repeat Simple_repeat 32 49 0 24 67 0 0 chr5 75507016 75507061 -127578471 + AT_rich Low_complexity Low_complexity 1 45 0 2393 174 62 2 chr5 75507374 75507776 -127577756 + MSTB LTR MaLR 1 426 0 9085 170 40 22 chr5 75507776 75509398 -127576134 + MSTB-int LTR MaLR 1 1651 0 2357 179 49 5 chr5 75509398 75509806 -127575726 + MSTB LTR MaLR 1 426 0 2586 151 38 14 chr5 75510072 75510490 -127575042 - MSTA LTR MaLR 0 428 1 2206 95 0 0 chr5 75510601 75510919 -127574613 - AluSx SINE Alu 0 318 1 264 260 13 13 chr5 75511779 75511856 -127573676 + MLT1K LTR MaLR 511 587 -1 309 232 52 9 chr5 75513743 75513853 -127571679 + MIR SINE MIR 94 208 -39 435 220 203 42 chr5 75513905 75514075 -127571457 + MIR SINE MIR 21 213 -49 210 238 16 48 chr5 75514727 75514790 -127570742 + MIR3 SINE MIR 103 163 -45 1686 112 131 51 chr5 75515400 75515714 -127569818 - MER44D DNA MER2_type 0 609 1 924 195 5 49 chr5 75515871 75515981 -127569551 + MER45A DNA AcHobo 2 102 -1479 2191 121 0 0 chr5 75515981 75516278 -127569254 - AluSx SINE Alu -15 297 1 924 195 5 49 chr5 75516278 75516352 -127569180 + MER45A DNA AcHobo 102 178 0 309 283 65 45 chr5 75518430 75518677 -127566855 - L1ME LINE L1 -274 5847 5596 1867 47 0 0 chr5 75519029 75519243 -127566289 - L1PA7 LINE L1 -3 6151 5938 308 294 65 71 chr5 75519575 75519759 -127565773 + L1ME LINE L1 863 1045 -5886 256 276 94 8 chr5 75520370 75520497 -127565035 + L1ME LINE L1 1316 1453 -4970 333 0 0 0 chr5 75520625 75520662 -127564870 + (GA)n Simple_repeat Simple_repeat 2 38 0 1970 253 133 36 chr5 75520730 75522155 -127563377 + L1ME LINE L1 2256 3865 -3076 813 263 143 52 chr5 75522155 75522657 -127562875 - MLT1H LTR MaLR -1 548 1 1970 253 133 36 chr5 75522657 75523115 -127562417 + L1ME LINE L1 3865 4277 -2664 1076 136 13 0 chr5 75523120 75523297 -127562235 - AluSg/x SINE Alu 0 307 129 997 279 112 24 chr5 75523297 75523760 -127561772 + L1ME LINE L1 4315 4818 -2123 656 197 0 0 chr5 75523763 75523885 -127561647 + L1MA5 LINE L1 6027 6148 -152 890 140 7 37 chr5 75523895 75524031 -127561501 - FLAM_C SINE Alu 0 133 2 1252 238 56 75 chr5 75524033 75524551 -127560981 + L1ME LINE L1 5362 5869 -1072 355 269 176 0 chr5 75525860 75525968 -127559564 + MER5A DNA MER1_type 63 189 0 473 317 21 16 chr5 75525988 75526174 -127559358 - Charlie8 DNA MER1_type -2164 253 67 2273 115 0 0 chr5 75526177 75526481 -127559051 + AluSg SINE Alu 1 304 -6 817 303 25 8 chr5 75526546 75526787 -127558745 + MIR SINE MIR 6 250 -12 367 333 7 27 chr5 75527626 75527776 -127557756 - MER117 DNA MER1_type 0 197 51 252 321 61 93 chr5 75528564 75528810 -127556722 - L2 LINE L2 -40 3232 2995 213 39 0 0 chr5 75529004 75529030 -127556502 + (T)n Simple_repeat Simple_repeat 1 26 0 3208 165 24 44 chr5 75529324 75529955 -127555577 - L1MB2 LINE L1 -8 6163 5546 227 333 121 15 chr5 75531386 75531518 -127554014 + MIR3 SINE MIR 57 202 -6 273 276 0 58 chr5 75532238 75532325 -127553207 + MIR SINE MIR 46 127 -135 180 0 0 0 chr5 75532326 75532346 -127553186 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1922 127 0 0 chr5 75532358 75532617 -127552915 - AluSq SINE Alu -49 264 6 260 239 80 98 chr5 75532645 75532800 -127552732 + MLT1D LTR MaLR 7 158 -347 3492 128 40 28 chr5 75532800 75533407 -127552125 - LTR38B LTR ERV1 0 611 1 1203 164 73 129 chr5 75533407 75533550 -127551982 + MLT1D LTR MaLR 156 306 -199 2075 135 0 49 chr5 75533550 75533876 -127551656 + AluSx SINE Alu 1 310 -2 1203 164 73 129 chr5 75533876 75534103 -127551429 + MLT1D LTR MaLR 306 505 0 25 31 0 0 chr5 75536296 75536328 -127549204 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 75537263 75537286 -127548246 + AT_rich Low_complexity Low_complexity 1 23 0 253 264 14 28 chr5 75537574 75537646 -127547886 - MIR3 SINE MIR -28 180 110 243 0 0 0 chr5 75538091 75538118 -127547414 + (T)n Simple_repeat Simple_repeat 1 27 0 322 263 53 0 chr5 75538326 75538402 -127547130 + MER5A DNA MER1_type 104 183 -6 * 635 204 30 0 chr5 75538391 75538523 -127547009 - MER5B DNA MER1_type -42 136 1 341 216 0 0 chr5 75538750 75538824 -127546708 + MIR SINE MIR 181 254 -8 1975 134 3 16 chr5 75538830 75539136 -127546396 + AluSx SINE Alu 1 302 -10 473 270 54 0 chr5 75539208 75539356 -127546176 - MIR SINE MIR -23 239 84 469 190 35 63 chr5 75540224 75540366 -127545166 - L2 LINE L2 0 3313 3176 1959 142 52 6 chr5 75540592 75540917 -127544615 + MER2 DNA MER2_type 1 340 -5 301 240 39 39 chr5 75541116 75541220 -127544312 + L3b LINE CR1 1241 1344 -239 195 338 0 0 chr5 75542592 75542663 -127542869 - MIR3 SINE MIR -3 205 135 199 321 9 71 chr5 75543113 75543225 -127542307 + MIR SINE MIR 17 121 -87 251 211 86 120 chr5 75543280 75543455 -127542077 - Charlie8 DNA MER1_type -2235 182 14 321 268 325 2 chr5 75543976 75544154 -127541378 - MIR SINE MIR 0 262 30 347 241 97 111 chr5 75545874 75546090 -127539442 - MER102b DNA MER1_type -19 322 110 1570 166 172 56 chr5 75546090 75546445 -127539087 + MSTD LTR MaLR 1 396 0 593 241 28 28 chr5 75546582 75546723 -127538809 - MIR3 SINE MIR -65 143 3 579 287 87 27 chr5 75548052 75548421 -127537111 + L1MCc LINE L1 32 422 -6001 2719 223 40 24 chr5 75548612 75549405 -127536127 + L1M4 LINE L1 2381 3186 -2960 218 161 0 18 chr5 75550572 75550628 -127534904 + (TG)n Simple_repeat Simple_repeat 2 56 0 528 292 56 0 chr5 75551369 75551513 -127534019 - L2 LINE L2 -4 3268 3117 426 204 48 10 chr5 75551710 75551813 -127533719 + MER103 DNA DNA 10 116 -50 2439 109 125 10 chr5 75551838 75552222 -127533310 - MSTA LTR MaLR 0 428 1 458 143 0 12 chr5 75552805 75552889 -127532643 + MER53 DNA DNA 100 182 -7 * 531 167 0 0 chr5 75552815 75552905 -127532627 - MER53 DNA DNA -99 90 1 968 160 139 26 chr5 75553207 75553401 -127532131 + MER20 DNA MER1_type 1 216 -3 527 277 58 54 chr5 75553887 75554165 -127531367 + MLT1J LTR MaLR 231 509 -2 375 284 6 49 chr5 75554976 75555067 -127530465 + MIR SINE MIR 73 156 -106 2291 172 12 8 chr5 75555067 75555468 -127530064 + MER57A LTR ERV1 1 403 0 375 284 6 49 chr5 75555468 75555538 -127529994 + MIR SINE MIR 156 227 -35 1381 233 76 49 chr5 75557189 75557636 -127527896 + MLT1C LTR MaLR 6 464 -3 1720 221 40 62 chr5 75557756 75557954 -127527578 + MLT1D LTR MaLR 6 207 -298 1877 180 28 26 chr5 75557954 75558343 -127527189 + L1MB8 LINE L1 5789 6178 0 1720 221 40 62 chr5 75558343 75558538 -127526994 + MLT1D LTR MaLR 207 388 -117 2344 119 71 6 chr5 75558538 75558890 -127526642 + THE1C LTR MaLR 1 375 0 1720 221 40 62 chr5 75558890 75558998 -127526534 + MLT1D LTR MaLR 388 497 -8 1224 138 66 117 chr5 75559140 75559473 -127526059 - MER33 DNA MER1_type -4 320 5 398 294 169 35 chr5 75559496 75559898 -127525634 + L1MC4a LINE L1 5499 5954 -1854 218 188 38 12 chr5 75560031 75560046 -127525486 + (TA)n Simple_repeat Simple_repeat 2 15 -68 2358 155 101 0 chr5 75560046 75560433 -127525099 + MSTB LTR MaLR 1 426 0 218 188 38 12 chr5 75560433 75560497 -127525035 + (TA)n Simple_repeat Simple_repeat 15 83 0 2588 166 26 5 chr5 75561040 75561457 -127524075 - MSTB LTR MaLR 0 426 1 1960 140 50 39 chr5 75561457 75561821 -127523711 - THE1C LTR MaLR -7 368 1 2141 103 0 7 chr5 75562299 75562602 -127522930 + AluSg SINE Alu 1 301 0 2464 195 144 10 chr5 75562905 75563427 -127522105 + MLT1G1 LTR MaLR 1 592 -3 205 358 91 17 chr5 75563432 75563608 -127521924 - L3 LINE CR1 -697 880 692 612 269 117 45 chr5 75563632 75563950 -127521582 + L1ME4a LINE L1 5518 5887 -234 1716 215 21 9 chr5 75563950 75564289 -127521243 + MER2 DNA MER2_type 2 344 0 612 269 117 45 chr5 75564289 75564475 -127521057 + L1ME4a LINE L1 5887 6058 -63 1659 151 60 32 chr5 75564531 75564816 -127520716 - AluJb SINE Alu -19 293 1 1525 261 58 47 chr5 75564891 75565405 -127520127 - MLT2B1 LTR ERVL 0 520 1 297 352 7 14 chr5 75565890 75566035 -127519497 - L3 LINE CR1 -904 673 530 659 236 118 38 chr5 75566117 75566278 -127519254 - MER112 DNA MER1_type 0 256 69 252 0 0 0 chr5 75566278 75566306 -127519226 + (TG)n Simple_repeat Simple_repeat 2 29 0 659 236 118 38 chr5 75566306 75566381 -127519151 - MER112 DNA MER1_type -187 69 1 5307 198 68 74 chr5 75566436 75567698 -127517834 + MER45R DNA AcHobo 1 1255 -326 2470 116 16 24 chr5 75567698 75568076 -127517456 - THE1C LTR MaLR 0 375 1 5307 198 68 74 chr5 75568076 75568316 -127517216 + MER45R DNA AcHobo 1255 1495 -86 1045 180 0 0 chr5 75568355 75568527 -127517005 - FRAM SINE Alu -6 170 1 448 185 62 0 chr5 75568527 75568608 -127516924 + MER45 DNA AcHobo 1496 1581 0 250 242 53 21 chr5 75569621 75569716 -127515816 + MER45R DNA AcHobo 1247 1344 -237 377 298 23 30 chr5 75569834 75569965 -127515567 + MIR SINE MIR 2 131 -131 32 14 0 68 chr5 75570549 75570560 -127514972 + AT_rich Low_complexity Low_complexity 1 11 -57 5588 124 53 18 chr5 75570560 75571416 -127514116 - L1MC1 LINE L1 0 6333 5448 32 14 0 68 chr5 75571416 75571477 -127514055 + AT_rich Low_complexity Low_complexity 11 68 0 2424 74 0 3 chr5 75572179 75572477 -127513055 - AluY SINE Alu -14 297 1 462 270 143 92 chr5 75572631 75573213 -127512319 + L2 LINE L2 2708 3310 -3 1505 243 115 7 chr5 75574293 75574738 -127510794 + MLT1H LTR MaLR 17 509 -40 225 0 0 0 chr5 75577593 75577618 -127507914 + (T)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr5 75578552 75578574 -127506958 + AT_rich Low_complexity Low_complexity 1 22 0 1094 216 112 81 chr5 75578574 75579056 -127506476 + MLT1J LTR MaLR 1 497 -14 898 191 58 17 chr5 75579120 75579293 -127506239 - AluJo SINE Alu -40 272 93 212 360 27 45 chr5 75581020 75581131 -127504401 - L2 LINE L2 -37 3235 3127 1583 172 93 71 chr5 75581313 75581691 -127503841 + MLT1B LTR MaLR 1 386 -4 234 195 0 0 chr5 75582052 75582093 -127503439 + MER5B DNA MER1_type 2 42 -136 1438 196 139 36 chr5 75582110 75582549 -127502983 + MLT1D LTR MaLR 22 505 0 423 272 154 50 chr5 75582927 75583446 -127502086 - L2 LINE L2 -1004 2310 1738 479 312 64 18 chr5 75583459 75583677 -127501855 + MIR SINE MIR 10 237 -25 707 153 69 69 chr5 75583759 75583879 -127501653 - MER53 DNA DNA 0 189 67 2315 197 18 30 chr5 75583879 75584386 -127501146 - MLT1D LTR MaLR 0 505 5 707 153 69 69 chr5 75584386 75584454 -127501078 - MER53 DNA DNA -121 68 1 28 0 0 0 chr5 75584604 75584632 -127500900 + AT_rich Low_complexity Low_complexity 1 28 0 1208 208 0 5 chr5 75584634 75584855 -127500677 - AluJo SINE Alu -92 220 1 368 170 8 26 chr5 75584985 75585071 -127500461 - LTR33A LTR ERVL -22 528 437 1796 171 0 7 chr5 75585614 75585907 -127499625 + AluJb SINE Alu 1 291 -21 786 226 54 27 chr5 75586114 75586335 -127499197 - MLT1H1 LTR MaLR -7 548 322 276 253 21 11 chr5 75586459 75586554 -127498978 - Charlie7 DNA MER1_type -2464 148 53 1634 176 22 29 chr5 75586837 75587149 -127498383 - AluJo SINE Alu -2 310 1 234 171 0 0 chr5 75587377 75587418 -127498114 + L2 LINE L2 3261 3301 -12 2236 119 0 0 chr5 75587557 75587852 -127497680 - AluSx SINE Alu -17 295 1 330 315 35 34 chr5 75589510 75589655 -127495877 - MIR SINE MIR -62 146 32 1557 131 30 0 chr5 75590652 75590888 -127494644 + AluSp SINE Alu 62 304 -9 361 289 18 9 chr5 75591487 75591601 -127493931 + MIR SINE MIR 109 223 -39 2537 192 83 23 chr5 75591976 75592575 -127492957 - L1MB1 LINE L1 -2 6166 5532 443 274 74 15 chr5 75593334 75593469 -127492063 + MIR SINE MIR 31 173 -89 302 294 66 71 chr5 75594559 75594756 -127490776 + MER91A DNA MER1_type 1 196 0 618 294 39 20 chr5 75594762 75594845 -127490687 - MIR SINE MIR -20 242 162 2126 90 0 4 chr5 75594845 75595113 -127490419 - AluSc SINE Alu -17 292 26 618 294 39 20 chr5 75595113 75595233 -127490299 - MIR SINE MIR -100 162 35 252 0 0 0 chr5 75596995 75597023 -127488509 + (TG)n Simple_repeat Simple_repeat 2 29 0 208 231 39 0 chr5 75597383 75597435 -127488097 + MIR SINE MIR 85 138 -124 721 245 72 30 chr5 75597860 75598097 -127487435 + MIR SINE MIR 14 260 -2 483 248 55 14 chr5 75598248 75598393 -127487139 - MER103 DNA DNA -2 164 14 333 256 49 71 chr5 75598560 75598713 -127486819 + MER5A DNA MER1_type 15 189 0 396 250 92 17 chr5 75599240 75599360 -127486172 + LTR68 LTR ERV1 278 406 -334 1917 221 46 68 chr5 75599866 75600532 -127485000 - LTR8A LTR ERV1 0 727 100 579 296 18 137 chr5 75603097 75603288 -127482244 + L2 LINE L2 2931 3057 -215 1907 97 0 4 chr5 75603288 75603557 -127481975 + AluY SINE Alu 38 305 0 579 296 18 137 chr5 75603557 75603751 -127481781 + L2 LINE L2 3057 3272 0 619 293 33 0 chr5 75603784 75603965 -127481567 + MIR SINE MIR 76 262 0 311 189 0 81 chr5 75605253 75605327 -127480205 - MIR SINE MIR -81 181 114 394 297 69 34 chr5 75606158 75606333 -127479199 - MER5A DNA MER1_type -6 183 3 326 229 39 88 chr5 75606394 75606576 -127478956 + MER5B DNA MER1_type 4 188 -1 266 180 16 0 chr5 75608606 75608667 -127476865 + CT-rich Low_complexity Low_complexity 2 63 0 254 316 76 43 chr5 75609986 75610147 -127475385 - MIR SINE MIR -58 204 39 1905 117 25 11 chr5 75610715 75610989 -127474543 + AluSq SINE Alu 1 278 -35 689 192 53 148 chr5 75611514 75611852 -127473680 - LTR8A-int LTR ERV1 -220 4716 4411 369 180 120 30 chr5 75611890 75611990 -127473542 - LTR37A LTR ERV1 -317 109 1 5884 184 29 57 chr5 75611991 75613352 -127472180 - LTR8A-int LTR ERV1 -687 4249 2927 1035 193 96 48 chr5 75613538 75613579 -127471953 - MSTD LTR MaLR 0 396 358 3010 192 29 76 chr5 75613579 75614304 -127471228 - LTR8 LTR ERV1 0 691 1 1035 193 96 48 chr5 75614304 75614599 -127470933 - MSTD LTR MaLR -38 358 1 1100 278 60 62 chr5 75614969 75615520 -127470012 - LTR48-int LTR ERV1 -5170 1161 612 433 279 7 21 chr5 75615629 75615769 -127469763 - LTR48-int LTR ERV1 -6157 644 507 489 269 55 40 chr5 75615855 75616056 -127469476 - LTR48-int LTR ERV1 -6127 204 1 266 191 90 28 chr5 75616062 75616227 -127469305 - LTR48 LTR ERV1 -5 732 449 1101 133 0 6 chr5 75617250 75617408 -127468124 + AluJb SINE Alu 134 290 -22 1039 134 43 18 chr5 75617687 75617851 -127467681 - MER20 DNA MER1_type -46 173 6 * 1366 200 65 80 chr5 75617841 75618305 -127467227 - MER110A LTR ERV1 -11 457 1 445 294 96 37 chr5 75618406 75618631 -127466901 + MIR SINE MIR 6 245 -17 325 288 179 33 chr5 75619157 75619341 -127466191 - MIR SINE MIR -33 229 19 464 269 38 8 chr5 75620021 75620165 -127465367 + MIR3 SINE MIR 36 185 -23 736 214 97 15 chr5 75620957 75621224 -127464308 - L1ME4a LINE L1 -3 6118 5830 340 236 74 79 chr5 75621224 75621440 -127464092 - L1MC4 LINE L1 -293 7749 7535 708 300 119 80 chr5 75621697 75622242 -127463290 - L2 LINE L2 -38 3234 2675 2375 115 48 25 chr5 75622242 75622598 -127462934 - THE1B LTR MaLR 0 364 1 708 300 119 80 chr5 75622598 75622825 -127462707 - L2 LINE L2 -597 2675 2458 1137 298 61 12 chr5 75622825 75623308 -127462224 - MLT1K LTR MaLR 0 588 10 782 313 197 37 chr5 75623316 75624451 -127461081 - L2 LINE L2 -842 2472 1156 306 288 72 38 chr5 75624907 75625060 -127460472 + MIR3 SINE MIR 13 178 -84 791 296 73 53 chr5 75625551 75625757 -127459775 + L2 LINE L2 2379 2596 -718 1591 186 29 29 chr5 75625757 75626064 -127459468 - AluJo SINE Alu -5 307 1 791 296 73 53 chr5 75626064 75626198 -127459334 + L2 LINE L2 2596 2726 -588 427 332 55 18 chr5 75626209 75626426 -127459106 + L2 LINE L2 2845 3069 -244 282 250 0 0 chr5 75626647 75626735 -127458797 + CT-rich Low_complexity Low_complexity 3 90 0 924 272 155 21 chr5 75626965 75627340 -127458192 - MLT1H LTR MaLR 0 549 125 219 303 117 56 chr5 75627499 75627661 -127457871 - L2 LINE L2 -21 3292 3121 264 349 79 40 chr5 75627671 75627797 -127457735 + L2 LINE L2 3123 3253 -19 2008 124 3 3 chr5 75628073 75628405 -127457127 + AluSc SINE Alu 3 334 0 1963 148 7 3 chr5 75628688 75628986 -127456546 + AluJb SINE Alu 1 299 -13 1786 158 23 116 chr5 75629363 75629793 -127455739 + MLT1B LTR MaLR 1 390 0 361 304 0 26 chr5 75630828 75630943 -127454589 - MIR SINE MIR -28 234 123 220 333 0 15 chr5 75631432 75631498 -127454034 + MIR SINE MIR 83 147 -61 812 230 72 19 chr5 75632417 75632626 -127452906 - MIR SINE MIR 0 262 43 509 265 22 15 chr5 75633161 75633297 -127452235 - MIR SINE MIR -53 209 73 1979 110 62 7 chr5 75633618 75633910 -127451622 - AluSg SINE Alu -2 308 1 180 111 0 0 chr5 75634492 75634519 -127451013 + (TG)n Simple_repeat Simple_repeat 2 28 0 460 229 8 25 chr5 75634910 75635028 -127450504 - MIR3 SINE MIR -6 202 87 2212 89 4 0 chr5 75635945 75636249 -127449283 + AluSc SINE Alu 1 305 0 315 221 132 68 chr5 75636252 75636487 -127449045 + L1MC5 LINE L1 7660 7909 -52 418 328 30 8 chr5 75637386 75637517 -127448015 - L2 LINE L2 -1 3271 3138 1278 175 74 12 chr5 75637557 75637814 -127447718 + ORSL DNA AcHobo 3 275 0 920 220 60 26 chr5 75638038 75638270 -127447262 - MIR SINE MIR 0 262 23 466 250 71 0 chr5 75640605 75640717 -127444815 + MIR SINE MIR 13 132 -130 222 350 200 0 chr5 75641653 75641773 -127443759 - MIR3 SINE MIR -35 173 30 253 333 26 26 chr5 75641802 75641916 -127443616 - L2 LINE L2 -79 3193 3080 427 221 126 0 chr5 75641920 75642047 -127443485 - MIR SINE MIR -10 252 110 260 288 25 0 chr5 75643472 75643552 -127441980 + MER91A DNA MER1_type 1 82 -114 439 264 47 47 chr5 75643555 75643684 -127441848 + L2 LINE L2 3185 3313 0 562 225 106 92 chr5 75643986 75644397 -127441135 + MLT1J LTR MaLR 165 511 0 6592 203 57 10 chr5 75646320 75648658 -127436874 - L1MA9 LINE L1 -7 6305 3849 22 0 0 0 chr5 75648835 75648857 -127436675 + AT_rich Low_complexity Low_complexity 1 22 0 448 314 151 0 chr5 75648884 75649056 -127436476 - MIR SINE MIR -16 246 49 287 309 24 73 chr5 75651036 75651201 -127434331 + MIR SINE MIR 8 164 -98 800 307 97 21 chr5 75651230 75651611 -127433921 + MLT1J2 LTR MaLR 33 442 -8 406 163 0 65 chr5 75651655 75651747 -127433785 + MIR SINE MIR 167 252 -10 216 97 0 0 chr5 75652230 75652261 -127433271 + (CACCAT)n Simple_repeat Simple_repeat 2 32 0 34 42 0 0 chr5 75652846 75652894 -127432638 + AT_rich Low_complexity Low_complexity 1 48 0 3749 122 6 79 chr5 75653529 75654186 -127431346 + MER4B LTR ERV1 1 609 -1 1424 219 86 0 chr5 75654634 75654926 -127430606 + MLT1E LTR MaLR 277 593 0 468 294 124 36 chr5 75655344 75655810 -127429722 + L2 LINE L2 2757 3296 -17 359 204 32 21 chr5 75656406 75656499 -127429033 + MER5B DNA MER1_type 85 178 0 608 263 101 44 chr5 75656566 75656666 -127428866 + MIR SINE MIR 1 94 -168 2415 137 19 19 chr5 75656666 75657030 -127428502 + THE1B LTR MaLR 1 364 0 12881 87 1 2 chr5 75657030 75658611 -127426921 + THE1B-int LTR MaLR 1 1580 0 2579 107 19 25 chr5 75658611 75658977 -127426555 + THE1B LTR MaLR 1 364 0 608 263 101 44 chr5 75658977 75659102 -127426430 + MIR SINE MIR 93 241 -21 1905 147 10 25 chr5 75659375 75659689 -127425843 + AluSx SINE Alu 1 309 -3 331 229 45 83 chr5 75660194 75660351 -127425181 + HAL1b LINE L1 1191 1341 -7 2104 135 29 40 chr5 75661212 75661285 -127424247 - MER2 DNA MER2_type 0 344 272 1927 133 0 7 chr5 75661285 75661563 -127423969 + AluSx SINE Alu 25 300 -12 2104 135 29 40 chr5 75661563 75661837 -127423695 - MER2 DNA MER2_type -72 272 1 1230 278 95 14 chr5 75662498 75662980 -127422552 - LTR33 LTR ERVL 0 521 1 389 337 66 28 chr5 75664482 75664663 -127420869 + MER5A DNA MER1_type 2 189 0 599 159 76 42 chr5 75664917 75665074 -127420458 - MLT1H1 LTR MaLR -410 145 1 180 0 0 0 chr5 75665560 75665580 -127419952 + (TC)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr5 75665613 75665633 -127419899 + (T)n Simple_repeat Simple_repeat 1 20 0 199 314 0 0 chr5 75666545 75666596 -127418936 + L2 LINE L2 3252 3302 -11 288 184 0 0 chr5 75666732 75666781 -127418751 - L2 LINE L2 -3 3310 3262 211 263 35 0 chr5 75666861 75666918 -127418614 + L2 LINE L2 3253 3311 -2 408 20 0 0 chr5 75667554 75667603 -127417929 + (CA)n Simple_repeat Simple_repeat 2 50 0 1055 254 90 37 chr5 75668040 75668442 -127417090 - MLT1J2 LTR MaLR -23 427 5 2100 124 7 0 chr5 75668476 75668775 -127416757 + AluSx SINE Alu 1 301 -11 640 309 30 10 chr5 75668891 75669092 -127416440 + MIR SINE MIR 7 211 -51 210 209 0 60 chr5 75669438 75669505 -127416027 + T-rich Low_complexity Low_complexity 5 67 0 2076 123 55 0 chr5 75669932 75670225 -127415307 - AluSc SINE Alu 0 309 1 229 280 204 38 chr5 75670739 75670871 -127414661 - L2 LINE L2 0 3272 3119 207 0 0 0 chr5 75671638 75671661 -127413871 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr5 75672474 75672497 -127413035 + AT_rich Low_complexity Low_complexity 1 23 0 2041 133 0 10 chr5 75673147 75673456 -127412076 + AluSc SINE Alu 1 306 -3 901 247 22 30 chr5 75673648 75673879 -127411653 + MIR SINE MIR 33 261 -1 307 173 200 0 chr5 75674730 75674805 -127410727 + MIR SINE MIR 48 137 -125 321 26 0 0 chr5 75674926 75674964 -127410568 + (TTG)n Simple_repeat Simple_repeat 2 39 0 227 233 58 23 chr5 75676020 75676106 -127409426 + L2 LINE L2 3184 3272 0 238 292 30 107 chr5 75676650 75676777 -127408755 - MER5A DNA MER1_type 0 189 77 2297 109 3 0 chr5 75676777 75677081 -127408451 - AluSx SINE Alu -7 305 1 238 292 30 107 chr5 75677081 75677121 -127408411 - MER5A DNA MER1_type -112 77 35 1138 292 96 35 chr5 75678489 75679030 -127406502 + MLT1L LTR MaLR 37 610 -5 940 180 67 0 chr5 75679542 75679720 -127405812 - MER3 DNA MER1_type -19 190 1 346 315 200 15 chr5 75679799 75679999 -127405533 + MIR SINE MIR 9 245 -17 533 229 208 0 chr5 75680093 75680237 -127405295 + MER5A DNA MER1_type 15 188 -1 937 235 110 145 chr5 75680515 75681125 -127404407 - MLT1G1 LTR MaLR -12 583 1 294 270 0 11 chr5 75682080 75682169 -127403363 + (CA)n Simple_repeat Simple_repeat 1 88 0 1966 201 63 11 chr5 75682502 75682950 -127402582 + MLT1C LTR MaLR 1 393 -3 511 250 90 6 chr5 75683543 75683699 -127401833 - MIR SINE MIR -58 204 36 1165 264 83 50 chr5 75683949 75684407 -127401125 + MLT1J LTR MaLR 39 511 0 2192 92 0 83 chr5 75684976 75685313 -127400219 - AluSx SINE Alu -3 309 1 607 65 0 13 chr5 75685464 75685541 -127399991 + L1PA10 LINE L1 6081 6156 -12 3815 205 66 60 chr5 75686584 75687003 -127398529 - L1M4 LINE L1 -871 5275 4860 2135 134 0 16 chr5 75687003 75687308 -127398224 - AluSq SINE Alu -13 300 1 3815 205 66 60 chr5 75687308 75688096 -127397436 - L1M4 LINE L1 -1286 4860 4060 621 268 60 0 chr5 75688108 75688276 -127397256 - MIR SINE MIR -58 204 27 348 177 32 0 chr5 75688282 75688344 -127397188 - MLT1D LTR MaLR -441 64 1 280 312 46 10 chr5 75690072 75690243 -127395289 - MIR SINE MIR -4 258 8 665 165 8 16 chr5 75690249 75690370 -127395162 - MER5A DNA MER1_type 0 189 70 1679 134 28 147 chr5 75691002 75691223 -127394309 - MER7A DNA MER2_type -2693 345 192 2440 121 8 11 chr5 75691223 75691579 -127393953 + THE1A LTR MaLR 1 355 0 1679 134 28 147 chr5 75691579 75691751 -127393781 - MER7A DNA MER2_type -2846 192 1 367 333 90 17 chr5 75692258 75692435 -127393097 - MIR SINE MIR -25 237 48 247 190 0 0 chr5 75692609 75692667 -127392865 + A-rich Low_complexity Low_complexity 1 58 0 211 258 10 10 chr5 75693031 75693128 -127392404 + GA-rich Low_complexity Low_complexity 1 97 0 403 311 80 0 chr5 75695303 75695454 -127390078 - MIR3 SINE MIR -7 201 39 31 26 0 0 chr5 75695918 75695956 -127389576 + AT_rich Low_complexity Low_complexity 1 38 0 1982 224 66 16 chr5 75695993 75696492 -127389040 - L1MC4 LINE L1 -141 7901 7378 411 298 73 42 chr5 75696838 75697128 -127388404 + L1ME4a LINE L1 2875 3171 -2975 417 290 122 50 chr5 75697151 75697686 -127387846 + L1ME4a LINE L1 4745 5317 -829 784 261 161 33 chr5 75697700 75698347 -127387185 + L1ME4a LINE L1 5394 6121 0 4049 209 51 7 chr5 75701067 75702435 -127383097 + L1MB7 LINE L1 4753 6175 -9 292 320 0 10 chr5 75702794 75702891 -127382641 + GA-rich Low_complexity Low_complexity 1 96 0 2408 87 3 6 chr5 75703526 75703837 -127381695 - AluSp SINE Alu -3 310 1 208 320 26 26 chr5 75705066 75705144 -127380388 - MIR SINE MIR -82 126 49 474 328 35 96 chr5 75705809 75706123 -127379409 + L2 LINE L2 2969 3263 -9 1761 176 3 0 chr5 75706205 75706489 -127379043 + AluJo SINE Alu 1 285 -27 427 127 42 0 chr5 75706489 75706607 -127378925 + (TA)n Simple_repeat Simple_repeat 2 124 0 234 136 0 0 chr5 75706755 75706799 -127378733 + (TA)n Simple_repeat Simple_repeat 1 44 0 1552 172 75 81 chr5 75706857 75707241 -127378291 - MLT1B LTR MaLR -8 382 1 443 321 43 14 chr5 75708268 75708408 -127377124 + L2 LINE L2 3122 3265 -7 1969 117 11 0 chr5 75710308 75710581 -127374951 + AluSx SINE Alu 1 276 -36 325 284 0 11 chr5 75711440 75711528 -127374004 + MER5A DNA MER1_type 20 106 -83 1716 194 98 3 chr5 75711977 75712354 -127373178 - L1MD2 LINE L1 -12 6347 5935 258 56 0 0 chr5 75712360 75712396 -127373136 + (CA)n Simple_repeat Simple_repeat 2 37 0 2660 130 9 27 chr5 75712403 75712842 -127372690 - Tigger2a DNA MER2_type -3 431 1 8554 113 14 5 chr5 75712882 75714146 -127371386 - Tigger1 DNA MER2_type -14 2404 1129 259 135 48 29 chr5 75714146 75714250 -127371282 + (TA)n Simple_repeat Simple_repeat 2 107 0 2362 160 17 5 chr5 75714256 75714675 -127370857 - L1MD2 LINE L1 -311 5931 5508 326 302 75 59 chr5 75715295 75715550 -127369982 - MIR SINE MIR 0 262 4 440 223 0 34 chr5 75716840 75717015 -127368517 + GA-rich Low_complexity Low_complexity 1 169 0 457 267 58 17 chr5 75717802 75717998 -127367534 - MER20B DNA MER1_type 0 219 17 295 321 110 22 chr5 75718034 75718352 -127367180 + L2 LINE L2 2248 2593 -721 210 381 79 27 chr5 75718627 75718955 -127366577 + L2 LINE L2 2630 2974 -340 250 289 185 64 chr5 75718957 75719005 -127366527 - L2 LINE L2 -595 2719 2678 2148 154 0 6 chr5 75719005 75719342 -127366190 + MER1B DNA MER1_type 2 336 -1 250 289 185 64 chr5 75719342 75719466 -127366066 - L2 LINE L2 -636 2678 2526 1799 175 45 14 chr5 75719549 75719903 -127365629 - MLT1A1 LTR MaLR 0 365 1 557 323 21 65 chr5 75720359 75720580 -127364952 - MIR SINE MIR -48 214 2 27 0 0 0 chr5 75720627 75720654 -127364878 + AT_rich Low_complexity Low_complexity 1 27 0 310 224 140 19 chr5 75720654 75720761 -127364771 - L1ME4a LINE L1 -16 6105 5986 341 318 38 48 chr5 75720813 75721007 -127364525 - L1ME4a LINE L1 -224 5897 5703 3706 144 35 8 chr5 75721007 75721603 -127363929 + LTR9 LTR ERV1 1 612 0 341 318 38 48 chr5 75721603 75721829 -127363703 - L1ME4a LINE L1 -418 5703 5481 805 145 0 0 chr5 75721867 75722017 -127363515 - AluJb SINE Alu 0 318 169 338 245 7 84 chr5 75722044 75722199 -127363333 + L1MEc LINE L1 36 178 -6218 2333 287 58 26 chr5 75722204 75723354 -127362178 + L1MEc LINE L1 217 1403 -4993 2675 221 13 6 chr5 75723357 75723882 -127361650 + MLT1F LTR MaLR 1 529 -13 210 162 0 0 chr5 75723907 75723944 -127361588 + A-rich Low_complexity Low_complexity 1 37 0 2742 236 63 35 chr5 75723974 75724894 -127360638 + L1M4 LINE L1 4454 5399 -747 372 89 0 0 chr5 75724903 75724959 -127360573 + L1MB8 LINE L1 6110 6165 -13 1099 162 5 0 chr5 75725033 75725230 -127360302 + L1PB1 LINE L1 3 200 -6663 * 14678 146 58 17 chr5 75725222 75730681 -127354851 + L1PB1 LINE L1 625 5863 -1004 2153 142 0 0 chr5 75730681 75730991 -127354541 - AluSx SINE Alu -2 310 1 14678 146 58 17 chr5 75730991 75731165 -127354367 + L1PB1 LINE L1 5863 6029 -838 402 21 0 0 chr5 75731165 75731212 -127354320 + (TG)n Simple_repeat Simple_repeat 1 47 0 14678 146 58 17 chr5 75731212 75731542 -127353990 + L1PB1 LINE L1 6029 6831 -36 25 0 0 0 chr5 75731542 75731567 -127353965 + AT_rich Low_complexity Low_complexity 1 25 0 412 246 67 30 chr5 75731629 75731763 -127353769 + L1ME1 LINE L1 6007 6145 -21 2278 81 7 3 chr5 75731894 75732191 -127353341 - AluSp SINE Alu -15 298 1 1155 271 129 31 chr5 75732215 75732835 -127352697 - L1MC4a LINE L1 -1865 5943 5263 915 299 63 31 chr5 75732856 75733586 -127351946 - L1MC4a LINE L1 -907 5239 4487 284 249 87 38 chr5 75733953 75734138 -127351394 - L1MC4a LINE L1 -2183 3963 3770 210 37 0 0 chr5 75734138 75734165 -127351367 + (GA)n Simple_repeat Simple_repeat 2 28 0 751 146 0 0 chr5 75734166 75734276 -127351256 - FLAM_C SINE Alu -32 111 2 361 248 94 40 chr5 75734277 75734426 -127351106 - L1P LINE L1 -2358 3788 3632 270 116 0 0 chr5 75734441 75734484 -127351048 + (TG)n Simple_repeat Simple_repeat 2 44 0 698 302 109 60 chr5 75734486 75735151 -127350381 - L1MC4a LINE L1 -2549 3597 2966 1742 169 10 10 chr5 75735151 75735447 -127350085 - AluJb SINE Alu -16 296 1 698 302 109 60 chr5 75735447 75735555 -127349977 - L1MC4a LINE L1 -3180 2966 2865 2172 123 3 7 chr5 75735555 75735863 -127349669 - AluSx SINE Alu -1 311 5 698 302 109 60 chr5 75735863 75736070 -127349462 - L1MC4a LINE L1 -3281 2865 2568 870 275 53 38 chr5 75736325 75736722 -127348810 - HAL1b LINE L1 -675 673 271 286 253 44 0 chr5 75736771 75736862 -127348670 - HAL1b LINE L1 -1165 183 89 24 0 0 0 chr5 75737008 75737032 -127348500 + AT_rich Low_complexity Low_complexity 1 24 0 2297 122 0 0 chr5 75738088 75738392 -127347140 - AluSx SINE Alu -8 304 1 337 289 57 53 chr5 75738854 75739100 -127346432 - L1MC4a LINE L1 -3631 2515 2269 21 57 0 0 chr5 75739176 75739211 -127346321 + AT_rich Low_complexity Low_complexity 1 35 0 620 331 100 51 chr5 75739489 75740326 -127345206 + L1MC4a LINE L1 4018 4895 -1251 2114 115 0 40 chr5 75740566 75740888 -127344644 + AluY SINE Alu 2 310 -1 666 267 232 17 chr5 75740987 75741561 -127343971 + L1MC4a LINE L1 5315 6011 -1797 273 341 37 7 chr5 75741752 75742051 -127343481 - L1M4 LINE L1 -1606 4540 4233 559 239 18 0 chr5 75742262 75742371 -127343161 + MER58A DNA MER1_type 11 121 0 398 278 68 8 chr5 75742427 75742560 -127342972 - MLT1I LTR MaLR -20 389 249 245 236 14 56 chr5 75742611 75742683 -127342849 - MLT1J2 LTR MaLR -298 152 84 301 294 15 0 chr5 75743158 75743226 -127342306 + L2 LINE L2 3203 3271 -1 1002 273 83 29 chr5 75743999 75744479 -127341053 + L1ME4a LINE L1 5364 5869 -252 803 271 64 5 chr5 75745189 75745407 -127340125 - MIR SINE MIR -21 241 11 2110 158 53 8 chr5 75745549 75745910 -127339622 + MLT1C LTR MaLR 3 379 -88 183 338 71 39 chr5 75746325 75746398 -127339134 - L2 LINE L2 0 3313 3244 2172 134 0 0 chr5 75746398 75746697 -127338835 - AluSx SINE Alu -13 299 1 183 338 71 39 chr5 75746697 75746777 -127338755 - L2 LINE L2 -69 3244 3155 339 238 133 0 chr5 75746853 75746958 -127338574 - MARNA DNA Mariner -112 474 356 792 183 23 23 chr5 75746958 75747133 -127338399 + MIR SINE MIR 88 262 0 237 342 105 16 chr5 75747214 75747404 -127338128 - MARNA DNA Mariner -295 291 85 413 316 167 9 chr5 75748556 75748771 -127336761 - MIR SINE MIR 0 262 14 2214 107 19 3 chr5 75749340 75749648 -127335884 - AluSp SINE Alu 0 313 1 4627 106 0 2 chr5 75749873 75750496 -127335036 + HSMAR1 DNA Mariner 666 1287 0 29 70 0 0 chr5 75751646 75751703 -127333829 + AT_rich Low_complexity Low_complexity 1 57 0 280 296 122 0 chr5 75752494 75752592 -127332940 - MIR3 SINE MIR -15 193 84 2200 134 6 3 chr5 75753865 75754201 -127331331 + MER1B DNA MER1_type 1 337 0 2263 89 0 23 chr5 75754965 75755269 -127330263 + AluY SINE Alu 1 297 -14 228 222 16 16 chr5 75756034 75756097 -127329435 - LTR33A LTR ERVL -17 506 444 2206 136 6 18 chr5 75756479 75756817 -127328715 - MER1B DNA MER1_type 0 337 4 23 0 0 0 chr5 75757034 75757057 -127328475 + AT_rich Low_complexity Low_complexity 1 23 0 419 217 180 58 chr5 75757057 75757246 -127328286 + MIR SINE MIR 1 212 -50 271 333 107 6 chr5 75757806 75757965 -127327567 + L2 LINE L2 2665 2839 -475 7562 22 5 0 chr5 75759444 75760403 -127325129 - L1PA3 LINE L1 -3 6152 5199 1625 212 73 32 chr5 75760687 75761097 -127324435 - MLT1D LTR MaLR -8 497 71 8391 66 2 1 chr5 75761097 75762148 -127323384 + MER11C LTR ERVK 1 1052 -19 639 172 16 8 chr5 75762148 75762270 -127323262 - MLT1D LTR MaLR -382 123 1 352 252 82 61 chr5 75762278 75762425 -127323107 - MIR SINE MIR -74 188 39 317 253 0 32 chr5 75762769 75762864 -127322668 - MIR SINE MIR -46 216 125 849 73 0 41 chr5 75763024 75763147 -127322385 - AluY SINE Alu -12 299 182 645 250 147 0 chr5 75763313 75763469 -127322063 + MER5A DNA MER1_type 10 188 -1 2135 248 37 9 chr5 75764560 75765104 -127320428 + L1MEc LINE L1 36 594 -5802 1614 240 105 50 chr5 75765106 75765631 -127319901 - MLT1E2 LTR MaLR -2 624 71 2842 273 54 32 chr5 75765708 75766940 -127318592 + L1MEc LINE L1 588 1845 -4551 1516 186 42 18 chr5 75766945 75767230 -127318302 - AluJo SINE Alu -20 292 1 758 271 29 10 chr5 75767296 75767503 -127318029 - MER58A DNA MER1_type -11 213 3 924 242 36 31 chr5 75767507 75767863 -127317669 + L1MEc LINE L1 1867 2224 -4172 558 261 43 24 chr5 75767871 75768124 -127317408 + L1ME1 LINE L1 937 1194 -5232 645 245 231 26 chr5 75768220 75768644 -127316888 + L1ME1 LINE L1 1442 2028 -4474 428 231 0 11 chr5 75768648 75768739 -127316793 - MER58B DNA MER1_type 0 341 252 2931 233 22 19 chr5 75768837 75769005 -127316527 + L1ME1 LINE L1 2117 2283 -4143 2396 75 0 3 chr5 75769005 75769300 -127316232 - AluY SINE Alu -17 294 1 2931 233 22 19 chr5 75769300 75769805 -127315727 + L1ME1 LINE L1 2283 2766 -3660 1802 166 0 17 chr5 75769805 75770106 -127315426 + AluJo SINE Alu 1 296 -16 2931 233 22 19 chr5 75770106 75770526 -127315006 + L1ME1 LINE L1 2766 3184 -3242 9179 212 57 20 chr5 75770536 75772828 -127312704 + L1MA4A LINE L1 526 2869 -3980 13346 162 35 27 chr5 75772829 75774411 -127311121 + L1MA4A LINE L1 3136 4705 -2300 1641 110 4 0 chr5 75774411 75774638 -127310894 + AluSg/x SINE Alu 85 312 0 13346 162 35 27 chr5 75774638 75775994 -127309538 + L1MA4A LINE L1 4705 6113 -892 2374 72 0 7 chr5 75775994 75776298 -127309234 + AluY SINE Alu 1 302 -9 13346 162 35 27 chr5 75776298 75777187 -127308345 + L1MA4A LINE L1 6113 6994 -11 233 217 0 0 chr5 75777213 75777282 -127308250 + L1ME1 LINE L1 3175 3243 -3183 1852 175 35 114 chr5 75777289 75777867 -127307665 + L1ME1 LINE L1 5872 6403 -43 508 211 41 27 chr5 75777766 75777913 -127307619 + L1MA10 LINE L1 6463 6611 -3 * 474 173 0 91 chr5 75780978 75781088 -127304444 - MER5B DNA MER1_type -78 100 1 224 350 66 29 chr5 75781237 75781374 -127304158 + MIR SINE MIR 89 230 -32 442 269 0 69 chr5 75781834 75781929 -127303603 + L2 LINE L2 3193 3278 -35 1937 130 99 30 chr5 75781929 75782291 -127303241 - MLT1B LTR MaLR -1 389 3 442 269 0 69 chr5 75782291 75782325 -127303207 + L2 LINE L2 3278 3313 0 280 368 68 60 chr5 75782376 75782626 -127302906 - L2 LINE L2 -17 3255 3004 12066 42 1 0 chr5 75782627 75784136 -127301396 - L1P LINE L1 -2335 3811 2302 12260 42 0 1 chr5 75784136 75786439 -127299093 + L1PA5 LINE L1 3869 6172 0 265 317 75 31 chr5 75786497 75786724 -127298808 - L2 LINE L2 -618 2696 2460 296 114 0 0 chr5 75786735 75786779 -127298753 - MLT1F1 LTR MaLR -523 44 1 615 239 22 0 chr5 75786779 75786913 -127298619 + MER5A DNA MER1_type 37 173 -16 234 150 0 0 chr5 75787081 75787121 -127298411 + (CGTG)n Simple_repeat Simple_repeat 3 42 0 237 65 0 0 chr5 75787332 75787363 -127298169 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 660 246 52 62 chr5 75787996 75788070 -127297462 + MIR SINE MIR 20 93 -169 4280 105 14 3 chr5 75788070 75788696 -127296836 + MER41B LTR ERV1 1 633 -2 660 246 52 62 chr5 75788696 75788832 -127296700 + MIR SINE MIR 93 228 -34 273 315 11 22 chr5 75788883 75788972 -127296560 + MIR SINE MIR 40 127 -81 2382 133 34 8 chr5 75789476 75790019 -127295513 + LTR49 LTR ERV1 1 593 -2 350 256 103 45 chr5 75790215 75790660 -127294872 + L1ME LINE L1 5266 5655 -466 214 239 0 0 chr5 75790756 75790802 -127294730 - L2 LINE L2 -310 2962 2917 242 284 25 12 chr5 75790869 75790950 -127294582 + L2 LINE L2 3194 3275 -38 377 271 81 14 chr5 75791003 75791142 -127294390 + HAL1b LINE L1 1209 6116 -5 316 308 44 91 chr5 75791388 75791752 -127293780 + L2 LINE L2 2921 3267 -5 416 220 0 9 chr5 75792710 75792819 -127292713 + GA-rich Low_complexity Low_complexity 4 111 0 639 261 89 31 chr5 75792991 75793282 -127292250 - L1ME4a LINE L1 -44 6077 5770 1316 86 0 35 chr5 75793698 75793896 -127291636 + L1PA8 LINE L1 5982 6172 0 21 36 0 0 chr5 75795735 75795763 -127289769 + AT_rich Low_complexity Low_complexity 1 28 0 1778 283 42 41 chr5 75795937 75796419 -127289113 + L1ME LINE L1 141 621 -5775 834 144 0 0 chr5 75796419 75796537 -127288995 + FLAM_C SINE Alu 1 118 -15 1778 283 42 41 chr5 75796537 75797738 -127287794 + L1ME LINE L1 621 1964 -4432 1970 141 6 10 chr5 75797820 75798133 -127287399 - AluJo SINE Alu 0 312 1 255 229 175 30 chr5 75798168 75798334 -127287198 + L1ME LINE L1 2178 2367 -4029 536 176 0 28 chr5 75798762 75798870 -127286662 - L1MD3 LINE L1 -329 7666 7562 408 238 0 40 chr5 75798870 75798971 -127286561 - MLT1F1 LTR MaLR -436 131 35 470 208 27 20 chr5 75798971 75799120 -127286412 - L1MC3 LINE L1 -688 7097 6948 5895 193 69 24 chr5 75799156 75802269 -127283263 - L1MC1 LINE L1 0 6333 2937 628 257 46 15 chr5 75802306 75802604 -127282928 - L1MC3 LINE L1 -304 5817 5542 216 0 0 0 chr5 75803215 75803239 -127282293 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 354 268 313 17 chr5 75805417 75805596 -127279936 - MIR SINE MIR -16 246 15 293 255 75 43 chr5 75806458 75806552 -127278980 + MIR SINE MIR 50 146 -116 315 297 84 63 chr5 75808003 75808099 -127277433 + L2 LINE L2 3029 3122 -150 261 0 0 0 chr5 75808099 75808128 -127277404 + (CA)n Simple_repeat Simple_repeat 1 29 0 315 297 84 63 chr5 75808128 75808270 -127277262 + L2 LINE L2 3122 3272 0 2197 134 0 0 chr5 75809596 75809902 -127275630 - AluSp SINE Alu -7 306 1 318 269 0 0 chr5 75811051 75811118 -127274414 - MIR3 SINE MIR -48 160 94 682 257 92 7 chr5 75811187 75811401 -127274131 + MIR SINE MIR 31 248 -14 34 24 0 0 chr5 75811486 75811527 -127274005 + AT_rich Low_complexity Low_complexity 1 41 0 299 285 126 31 chr5 75811580 75811723 -127273809 - MIR SINE MIR -45 163 8 231 119 45 30 chr5 75812901 75812968 -127272564 + CT-rich Low_complexity Low_complexity 4 71 0 749 276 33 16 chr5 75813436 75813679 -127271853 + MIR SINE MIR 8 254 -8 365 319 33 24 chr5 75814188 75814380 -127271152 - MIR SINE MIR -53 209 14 760 268 33 24 chr5 75815888 75816101 -127269431 + MIR SINE MIR 7 221 -41 637 247 91 41 chr5 75818417 75818737 -127266795 - L1MC4 LINE L1 -6 8036 7701 303 130 0 0 chr5 75818757 75818811 -127266721 + (CA)n Simple_repeat Simple_repeat 2 55 0 242 255 0 0 chr5 75818814 75818865 -127266667 - L1MD3 LINE L1 -230 7765 7715 883 232 63 14 chr5 75818952 75819237 -127266295 + L1MC4 LINE L1 6916 7214 -828 386 304 174 41 chr5 75819242 75819634 -127265898 - L1MC4a LINE L1 -1281 6527 6084 207 88 0 0 chr5 75819706 75819740 -127265792 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 244 330 44 0 chr5 75820098 75820189 -127265343 + L2 LINE L2 2704 2798 -516 208 333 0 0 chr5 75820956 75821007 -127264525 + MER5B DNA MER1_type 1 51 -127 * 249 247 14 27 chr5 75820991 75821064 -127264468 - MER5A DNA MER1_type -74 115 44 333 269 194 15 chr5 75822035 75822236 -127263296 + MIR SINE MIR 12 248 -14 1042 122 13 0 chr5 75822242 75822398 -127263134 - L1MB3 LINE L1 0 6183 6026 6439 180 89 13 chr5 75822470 75823911 -127261621 + Looper DNA T2_type 8 1557 -1 1952 142 17 7 chr5 75824429 75824724 -127260808 + AluJb SINE Alu 1 298 -14 228 333 48 19 chr5 75825003 75825108 -127260424 + L3 LINE CR1 1450 1557 -20 786 297 75 34 chr5 75825290 75825758 -127259774 + LTR33 LTR ERVL 29 515 -6 190 275 154 11 chr5 75825758 75825849 -127259683 + MIR SINE MIR 159 262 0 1908 203 3 14 chr5 75825928 75826273 -127259259 - MER58B DNA MER1_type 0 341 1 312 262 221 14 chr5 75826903 75827048 -127258484 + MER5B DNA MER1_type 1 175 -3 190 215 13 101 chr5 75826989 75827068 -127258464 - MER5A DNA MER1_type -117 72 1 * 815 300 76 76 chr5 75827255 75827732 -127257800 - L2 LINE L2 0 3272 2781 192 346 26 13 chr5 75827786 75827864 -127257668 - MIR SINE MIR -103 105 27 551 245 175 7 chr5 75829856 75829999 -127255533 + MER5A DNA MER1_type 9 175 -14 234 240 25 107 chr5 75830514 75830635 -127254897 + MIR SINE MIR 34 144 -64 1047 252 121 42 chr5 75831047 75831528 -127254004 + LTR33A LTR ERVL 1 519 -4 367 302 40 16 chr5 75833862 75833988 -127251544 + MIR SINE MIR 15 143 -119 350 357 28 16 chr5 75834049 75834304 -127251228 + L2 LINE L2 2720 2977 -337 450 349 64 9 chr5 75834363 75834581 -127250951 + MIR SINE MIR 12 241 -21 191 277 146 46 chr5 75834648 75834778 -127250754 + L2 LINE L2 3161 3303 -10 * 282 206 137 0 chr5 75834775 75834848 -127250684 + MIR SINE MIR 178 260 -2 922 153 202 6 chr5 75834916 75835099 -127250433 + MER20 DNA MER1_type 1 219 0 3646 168 32 34 chr5 75835808 75836491 -127249041 + L1MB5 LINE L1 5485 6166 -8 2548 146 6 3 chr5 75837468 75837832 -127247700 + MLT1A1 LTR MaLR 1 365 0 1594 110 12 41 chr5 75839762 75840008 -127245524 - MER1B DNA MER1_type 0 339 101 250 179 0 0 chr5 75840013 75840052 -127245480 - MER1B DNA MER1_type -298 39 1 24 0 0 0 chr5 75840964 75840988 -127244544 + AT_rich Low_complexity Low_complexity 1 24 0 505 281 34 39 chr5 75841803 75841981 -127243551 + MIR SINE MIR 62 238 -24 298 284 74 0 chr5 75842998 75843079 -127242453 - L2 LINE L2 0 3272 3186 498 310 7 0 chr5 75843749 75843891 -127241641 - L2 LINE L2 0 3313 3171 319 302 39 0 chr5 75843986 75844115 -127241417 - LTR67 LTR ERVL -21 536 403 272 235 24 59 chr5 75844567 75844652 -127240880 - L2 LINE L2 -244 3069 2988 593 373 79 5 chr5 75844691 75845133 -127240399 - L2 LINE L2 -464 2850 2376 819 291 83 48 chr5 75846906 75847326 -127238206 + MLT1L LTR MaLR 158 592 -23 535 211 41 27 chr5 75847737 75847884 -127237648 + L1MA10 LINE L1 6183 6331 -3 479 173 0 91 chr5 75850948 75851058 -127234474 - MER5B DNA MER1_type -78 100 1 186 301 12 48 chr5 75851261 75851344 -127234188 + MIR SINE MIR 151 230 -32 434 269 0 69 chr5 75851804 75851899 -127233633 + L2 LINE L2 3193 3278 -35 2124 127 99 30 chr5 75851899 75852261 -127233271 - MLT1B LTR MaLR -1 389 3 434 269 0 69 chr5 75852261 75852295 -127233237 + L2 LINE L2 3278 3313 0 246 368 68 60 chr5 75852346 75852596 -127232936 - L2 LINE L2 -17 3255 3004 6458 38 2 0 chr5 75852597 75853395 -127232137 - L1P LINE L1 -2335 3811 3012 245 200 0 0 chr5 75853774 75853824 -127231708 + L1MCa LINE L1 1621 1670 -4756 993 266 74 50 chr5 75853874 75854640 -127230892 - L1MEd LINE L1 -4862 1257 592 2056 141 33 36 chr5 75854960 75855322 -127230210 - THE1C LTR MaLR -1 374 14 21 36 0 0 chr5 75858504 75858532 -127227000 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 75858658 75858684 -127226848 + (CA)n Simple_repeat Simple_repeat 2 27 0 299 0 78 0 chr5 75859123 75859174 -127226358 + (TA)n Simple_repeat Simple_repeat 2 56 0 189 0 0 0 chr5 75859184 75859205 -127226327 + (CA)n Simple_repeat Simple_repeat 2 22 0 986 288 88 22 chr5 75859236 75859294 -127226238 - L1ME3 LINE L1 -278 5867 5814 1114 126 107 42 chr5 75859294 75859509 -127226023 + MER30 DNA MER1_type 2 230 0 986 288 88 22 chr5 75859509 75860335 -127225197 - L1ME3 LINE L1 -331 5814 4925 40148 67 14 3 chr5 75860428 75865615 -127219917 + L1PA5 LINE L1 20 5262 -884 7227 42 1 1 chr5 75865626 75866449 -127219083 + L1PA5 LINE L1 5330 6152 -2 775 294 46 5 chr5 75866456 75866674 -127218858 + LTR16A LTR ERVL 206 432 -18 4323 271 63 34 chr5 75866701 75867740 -127217792 + HERV16 LTR ERVL 33 1125 -3871 867 222 88 5 chr5 75867740 75867934 -127217598 + MER58C DNA MER1_type 3 212 -3 4323 271 63 34 chr5 75867934 75868310 -127217222 + HERV16 LTR ERVL 1125 1489 -3507 1864 252 9 2 chr5 75868762 75869191 -127216341 + LTR16A LTR ERVL 19 450 0 864 276 86 56 chr5 75869277 75870185 -127215347 - L1ME3 LINE L1 -1955 4174 3240 20750 33 2 5 chr5 75870687 75873841 -127211691 - L1PA3 LINE L1 0 6155 3012 245 200 0 0 chr5 75874220 75874270 -127211262 + L1MCa LINE L1 1621 1670 -4756 1011 268 74 49 chr5 75874320 75875085 -127210447 - L1ME3 LINE L1 -4862 1257 592 2038 144 33 36 chr5 75875405 75875767 -127209765 - THE1C LTR MaLR -1 374 14 21 36 0 0 chr5 75878946 75878974 -127206558 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 75879100 75879126 -127206406 + (CA)n Simple_repeat Simple_repeat 2 27 0 378 233 121 17 chr5 75880999 75881115 -127204417 - MIR SINE MIR -64 198 71 2228 158 48 5 chr5 75881504 75881878 -127203654 - MLT1B LTR MaLR 0 390 1 501 312 50 20 chr5 75882426 75882628 -127202904 - MIR SINE MIR -43 219 12 228 284 49 12 chr5 75883053 75883134 -127202398 + L2 LINE L2 3168 3251 -21 186 260 0 0 chr5 75883095 75883145 -127202387 + MIR SINE MIR 209 258 -4 * 2243 102 0 3 chr5 75885291 75885586 -127199946 + AluSx SINE Alu 1 294 -18 7054 92 4 12 chr5 75885740 75886720 -127198812 - L1P LINE L1 -3445 2701 1730 3330 91 8 15 chr5 75886719 75886993 -127198539 + L1PA7 LINE L1 4440 4711 -1435 * 2524 69 3 0 chr5 75886993 75887296 -127198236 + AluY SINE Alu 1 304 -7 3330 91 8 15 chr5 75887296 75887494 -127198038 + L1PA7 LINE L1 4711 4909 -1237 7551 48 12 1 chr5 75887497 75888652 -127196880 + L1PA7 LINE L1 4990 6153 -1 266 314 33 39 chr5 75888731 75888884 -127196648 - LTR16C LTR ERVL 0 491 340 1254 91 0 0 chr5 75889535 75889700 -127195832 - AluY SINE Alu -3 308 144 2480 57 0 0 chr5 75890779 75891080 -127194452 + AluY SINE Alu 5 305 -6 301 325 43 0 chr5 75891270 75891433 -127194099 - MER102b DNA MER1_type -8 333 164 2841 113 9 60 chr5 75891837 75891881 -127193651 - MSTA LTR MaLR 0 428 383 1590 207 30 3 chr5 75891881 75892002 -127193530 + AluJb SINE Alu 5 121 -191 180 0 0 0 chr5 75892002 75892022 -127193510 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1590 207 30 3 chr5 75892022 75892200 -127193332 + AluJb SINE Alu 121 312 0 2841 113 9 60 chr5 75892200 75892606 -127192926 - MSTA LTR MaLR -45 383 1 197 189 27 0 chr5 75892983 75893020 -127192512 - MIR SINE MIR -63 145 108 323 275 92 0 chr5 75893622 75893731 -127191801 - MIR3 SINE MIR -31 177 59 412 246 53 0 chr5 75893916 75894030 -127191502 - MER103 DNA DNA -3 163 44 338 336 47 23 chr5 75896235 75896363 -127189169 - L2 LINE L2 -1 3271 3141 861 178 0 0 chr5 75897433 75897562 -127187970 - FLAM_A SINE Alu -3 130 2 199 268 0 0 chr5 75897930 75897971 -127187561 - L2 LINE L2 -8 3264 3224 629 241 28 23 chr5 75898140 75898326 -127187206 + MIR SINE MIR 51 236 -26 239 169 77 15 chr5 75900280 75900345 -127185187 - Zaphod DNA AcHobo -1851 2180 2112 1959 167 62 3 chr5 75902880 75903203 -127182329 - MER2 DNA MER2_type -2 342 1 869 280 100 43 chr5 75903215 75903245 -127182287 + MLT1J1 LTR MaLR 2 29 -417 2186 119 3 7 chr5 75903245 75903547 -127181985 - AluSq SINE Alu -12 301 1 869 280 100 43 chr5 75903547 75903937 -127181595 + MLT1J1 LTR MaLR 29 446 0 252 309 98 20 chr5 75903971 75904175 -127181357 + L1ME4a LINE L1 5833 6052 -69 760 279 64 0 chr5 75905089 75905322 -127180210 - LTR16A LTR ERVL 0 450 203 263 224 17 0 chr5 75905358 75905416 -127180116 - LTR16A1 LTR ERVL -336 121 63 247 385 88 15 chr5 75905676 75905881 -127179651 + L2 LINE L2 2872 3091 -181 377 244 118 0 chr5 75907664 75907783 -127177749 + L2 LINE L2 3140 3272 0 344 286 149 19 chr5 75909010 75909171 -127176361 - MIR SINE MIR -11 251 70 468 280 0 0 chr5 75909192 75909299 -127176233 - MER5B DNA MER1_type -2 176 70 387 310 62 0 chr5 75910506 75910619 -127174913 - MIR3 SINE MIR -2 206 87 404 300 50 109 chr5 75910733 75911153 -127174379 + L2 LINE L2 2348 2742 -572 272 89 0 22 chr5 75911177 75911222 -127174310 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 1392 126 89 20 chr5 75911228 75911475 -127174057 - THE1C LTR MaLR -110 265 2 412 277 96 27 chr5 75911555 75911743 -127173789 - MIR SINE MIR -14 248 48 430 230 90 0 chr5 75912088 75912188 -127173344 - MER81 DNA DNA 0 114 6 232 386 26 0 chr5 75912375 75912489 -127173043 - L2 LINE L2 -2890 424 308 388 296 0 40 chr5 75912628 75912753 -127172779 + MIR SINE MIR 35 154 -108 1975 176 42 8 chr5 75913816 75914169 -127171363 - MLT1A1 LTR MaLR 0 365 1 342 222 37 65 chr5 75914434 75914542 -127170990 - MER91C DNA MER1_type -35 105 1 365 239 88 8 chr5 75914689 75914809 -127170723 - MIR3 SINE MIR 0 208 78 349 213 148 66 chr5 75916313 75916435 -127169097 - L2 LINE L2 0 3313 3182 2343 89 3 13 chr5 75921343 75921658 -127163874 + AluSx SINE Alu 1 312 0 2345 245 108 23 chr5 75923274 75924654 -127160878 + L1ME LINE L1 30 1610 -4470 21 57 0 0 chr5 75924802 75924837 -127160695 + AT_rich Low_complexity Low_complexity 1 35 0 2057 179 47 49 chr5 75927736 75928244 -127157288 + Charlie4a DNA MER1_type 2 508 0 222 409 42 28 chr5 75928367 75928509 -127157023 + L2 LINE L2 2996 3139 -133 230 291 159 31 chr5 75929395 75929715 -127155817 + L2 LINE L2 533 893 -2421 5917 29 1 9 chr5 75930378 75931042 -127154490 - L1PA3 LINE L1 -3 6152 5494 30 0 0 0 chr5 75931264 75931294 -127154238 + AT_rich Low_complexity Low_complexity 1 30 0 2088 169 41 8 chr5 75931829 75932220 -127153312 - L1MB8 LINE L1 0 6178 5775 303 303 111 0 chr5 75932335 75932497 -127153035 + MIR SINE MIR 82 261 -1 341 326 174 18 chr5 75932737 75932955 -127152577 - L1MC4a LINE L1 -1868 5940 5689 621 279 69 26 chr5 75935272 75935505 -127150027 - MIR SINE MIR -4 258 16 1045 206 156 29 chr5 75936643 75937226 -127148306 + LTR50 LTR ERVL 3 508 -15 335 274 19 38 chr5 75937998 75938104 -127147428 + MIR SINE MIR 49 152 -110 758 236 102 19 chr5 75939035 75939251 -127146281 - MIR SINE MIR -21 241 8 249 318 37 9 chr5 75940484 75940591 -127144941 - L2 LINE L2 -1 3312 3203 270 350 0 10 chr5 75941552 75941655 -127143877 - MIR SINE MIR -71 191 90 461 17 17 0 chr5 75942036 75942094 -127143438 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2458 127 30 25 chr5 75943358 75943720 -127141812 + THE1B LTR MaLR 1 364 0 2460 78 0 0 chr5 75944460 75944756 -127140776 - AluSc SINE Alu -13 296 1 319 283 58 29 chr5 75945604 75945742 -127139790 + MIR3 SINE MIR 18 159 -49 207 0 0 0 chr5 75946224 75946247 -127139285 + (TC)n Simple_repeat Simple_repeat 2 24 0 264 333 12 0 chr5 75946247 75946328 -127139204 + C-rich Low_complexity Low_complexity 4 85 0 835 279 87 53 chr5 75946684 75947190 -127138342 + L1MC4a LINE L1 5526 6048 -1760 204 308 158 17 chr5 75947447 75947567 -127137965 + MIR3 SINE MIR 8 144 -64 2169 151 100 5 chr5 75947650 75948041 -127137491 - MSTA LTR MaLR 0 428 1 333 314 41 52 chr5 75948064 75948144 -127137388 + MIR SINE MIR 50 129 -133 1954 142 0 17 chr5 75948144 75948439 -127137093 + AluSx SINE Alu 1 290 -22 333 314 41 52 chr5 75948439 75948530 -127137002 + MIR SINE MIR 129 219 -43 517 228 245 24 chr5 75948535 75948829 -127136703 + L2 LINE L2 2955 3313 0 330 315 0 19 chr5 75948948 75949056 -127136476 - MIR SINE MIR -142 120 15 2545 61 0 0 chr5 75949698 75949993 -127135539 - AluY SINE Alu -16 295 1 552 115 13 0 chr5 75950274 75950352 -127135180 + MADE1 DNA Mariner 2 80 0 926 191 0 0 chr5 75950426 75950578 -127134954 + FRAM SINE Alu 1 152 -24 1990 152 0 3 chr5 75950656 75950959 -127134573 - AluJb SINE Alu -10 302 1 243 323 45 111 chr5 75951192 75951390 -127134142 + MER5A DNA MER1_type 2 186 -3 291 356 192 5 chr5 75951769 75952393 -127133139 - L2 LINE L2 -969 2345 1605 1043 209 34 34 chr5 75952426 75952661 -127132871 - MLT1A2 LTR MaLR 0 374 140 6059 147 29 4 chr5 75952663 75953385 -127132147 + L1MA4 LINE L1 4559 5262 -1038 279 54 0 0 chr5 75953385 75953422 -127132110 + (CA)n Simple_repeat Simple_repeat 2 38 0 6059 147 29 4 chr5 75953422 75954395 -127131137 + L1MA4 LINE L1 5262 6293 -7 761 155 6 122 chr5 75954410 75954591 -127130941 - MLT1A2 LTR MaLR -214 160 1 207 337 148 50 chr5 75954998 75955600 -127129932 - L2 LINE L2 -2492 822 162 531 231 43 113 chr5 75956622 75956686 -127128846 + L1ME4a LINE L1 5518 5585 -536 2136 139 0 10 chr5 75956686 75956996 -127128536 + AluSx SINE Alu 2 308 -4 531 231 43 113 chr5 75956996 75957371 -127128161 + L1ME4a LINE L1 5585 6121 0 333 0 0 0 chr5 75957831 75957868 -127127664 + (CA)n Simple_repeat Simple_repeat 1 37 0 220 367 117 16 chr5 75959165 75959353 -127126179 + L3 LINE CR1 337 543 -1034 567 280 27 7 chr5 75959369 75959519 -127126013 + MIR SINE MIR 1 153 -109 825 256 99 40 chr5 75959569 75959695 -127125837 + MLT1J2 LTR MaLR 71 188 -262 231 36 0 0 chr5 75959695 75959723 -127125809 + (TC)n Simple_repeat Simple_repeat 1 28 0 825 256 99 40 chr5 75959723 75959920 -127125612 + MLT1J2 LTR MaLR 188 413 -37 2558 123 46 73 chr5 75960098 75960733 -127124799 - MER4B LTR ERV1 0 766 1 851 266 67 55 chr5 75960949 75961073 -127124459 + MLT1I LTR MaLR 65 186 -223 4361 178 86 12 chr5 75961073 75961842 -127123690 - LTR1B LTR ERV1 0 826 1 851 266 67 55 chr5 75961842 75962044 -127123488 + MLT1I LTR MaLR 186 395 -14 640 338 123 38 chr5 75962064 75962803 -127122729 + L3 LINE CR1 548 1349 -228 1483 191 54 71 chr5 75963905 75964453 -127121079 - LTR28 LTR ERV1 -13 813 343 753 333 101 21 chr5 75964606 75965071 -127120461 + L2 LINE L2 2475 2976 -338 584 325 71 4 chr5 75965292 75965547 -127119985 + LTR16C LTR ERVL 163 434 -57 506 188 0 0 chr5 75965551 75965647 -127119885 + L1MD3 LINE L1 7889 7984 -11 1614 183 18 14 chr5 75965738 75966023 -127119509 + AluJo SINE Alu 1 286 -26 2078 205 46 38 chr5 75966374 75967191 -127118341 + L1ME2 LINE L1 4994 5824 -340 1815 133 3 70 chr5 75967191 75967507 -127118025 + AluSx SINE Alu 1 295 -17 2078 205 46 38 chr5 75967507 75967570 -127117962 + L1ME2 LINE L1 5824 5885 -279 1768 152 18 29 chr5 75968448 75968790 -127116742 + L1MB3 LINE L1 5839 6176 -7 25 0 0 0 chr5 75969046 75969071 -127116461 + AT_rich Low_complexity Low_complexity 1 25 0 238 309 65 43 chr5 75969579 75969718 -127115814 - MIR SINE MIR -27 235 94 351 0 0 0 chr5 75969936 75969975 -127115557 + (TG)n Simple_repeat Simple_repeat 1 39 0 530 339 128 28 chr5 75970281 75970809 -127114723 - L2 LINE L2 -95 3177 2583 421 300 75 15 chr5 75971588 75971788 -127113744 + L1ME4a LINE L1 5660 5871 -250 446 311 57 0 chr5 75971788 75971910 -127113622 + L2 LINE L2 3185 3313 0 255 245 88 10 chr5 75971962 75972064 -127113468 + L1ME4a LINE L1 5955 6064 -57 425 333 158 12 chr5 75973237 75973477 -127112055 - L3 LINE CR1 -45 1532 1258 973 267 110 71 chr5 75973570 75974969 -127110563 + L1MEd LINE L1 246 1731 -4579 411 308 120 39 chr5 75974981 75975612 -127109920 + L1MEd LINE L1 1790 2430 -3699 373 322 48 29 chr5 75975616 75975865 -127109667 + L1MEd LINE L1 2302 2571 -3558 883 229 90 11 chr5 75976103 75976382 -127109150 - MER20B DNA MER1_type -264 519 219 1583 173 11 4 chr5 75976444 75976715 -127108817 + AluSx SINE Alu 1 273 -39 250 227 0 47 chr5 75976756 75976884 -127108648 + GA-rich Low_complexity Low_complexity 1 122 0 689 140 0 54 chr5 75976886 75977072 -127108460 + (GGGA)n Simple_repeat Simple_repeat 2 177 0 373 234 0 14 chr5 75977150 75977295 -127108237 + A-rich Low_complexity Low_complexity 5 147 0 188 35 35 0 chr5 75982301 75982330 -127103202 + (GA)n Simple_repeat Simple_repeat 1 30 0 180 135 0 0 chr5 75982369 75982406 -127103126 + (TC)n Simple_repeat Simple_repeat 1 37 0 285 301 6 34 chr5 75985026 75985202 -127100330 + CT-rich Low_complexity Low_complexity 2 172 0 356 179 0 12 chr5 75985248 75985332 -127100200 + GA-rich Low_complexity Low_complexity 3 85 0 1211 114 30 10 chr5 75985342 75985544 -127099988 + L1PB2 LINE L1 5944 6149 -2 228 353 15 23 chr5 75985548 75985681 -127099851 - MER20B DNA MER1_type -588 195 64 2693 168 48 46 chr5 75985885 75987087 -127098445 - L1MC3 LINE L1 -4 8199 7001 2040 155 0 0 chr5 75987087 75987383 -127098149 + AluJb SINE Alu 1 296 -16 2693 168 48 46 chr5 75987383 75988223 -127097309 - L1MC3 LINE L1 -1202 7001 6034 2210 101 7 7 chr5 75988223 75988529 -127097003 + AluSx SINE Alu 1 306 -6 2693 168 48 46 chr5 75988529 75988983 -127096549 - L1MC3 LINE L1 -2169 6034 5582 886 238 98 81 chr5 75989001 75989319 -127096213 - MSTD LTR MaLR 0 396 58 2026 115 7 3 chr5 75989319 75989606 -127095926 + AluSq SINE Alu 1 288 -25 886 238 98 81 chr5 75989606 75989665 -127095867 - MSTD LTR MaLR -338 58 1 1743 223 204 0 chr5 75989665 75990346 -127095186 - L1MC3 LINE L1 -1001 5563 4744 * 4041 211 51 35 chr5 75990340 75992124 -127093408 - L1MC3 LINE L1 -4405 2340 302 3221 67 20 33 chr5 75992124 75992574 -127092958 + MLT2A1 LTR ERVL 1 444 0 4041 211 51 35 chr5 75992574 75992869 -127092663 - L1MC3 LINE L1 -6443 302 13 269 360 82 14 chr5 75993084 75993231 -127092301 - L2 LINE L2 -4 3268 3112 22 35 0 0 chr5 75994044 75994073 -127091459 + AT_rich Low_complexity Low_complexity 1 29 0 536 250 79 12 chr5 75994344 75994508 -127091024 - MER5B DNA MER1_type -3 175 1 1666 210 122 11 chr5 75995885 75996351 -127089181 - LTR33 LTR ERVL -2 519 2 1716 179 26 19 chr5 75996784 75997092 -127088440 + AluJo SINE Alu 1 310 -2 24 0 0 0 chr5 76000426 76000450 -127085082 + AT_rich Low_complexity Low_complexity 1 24 0 241 259 81 51 chr5 76000496 76000732 -127084800 + L1ME4a LINE L1 4370 4612 -1534 236 253 128 39 chr5 76000807 76001143 -127084389 + L1ME4a LINE L1 5756 6121 0 483 234 99 5 chr5 76003241 76003442 -127082090 + L1MC4 LINE L1 7823 8042 0 475 261 150 14 chr5 76004382 76004658 -127080874 + L1M4c LINE L1 2304 2618 -3764 332 322 82 49 chr5 76004811 76005078 -127080454 + L1M4c LINE L1 2996 3271 -3111 1670 162 3 35 chr5 76005246 76005536 -127079996 - AluSx SINE Alu -30 282 2 216 97 0 0 chr5 76006321 76006352 -127079180 + (A)n Simple_repeat Simple_repeat 1 31 0 453 259 0 32 chr5 76007141 76007299 -127078233 - MER104 DNA Tc2 0 180 28 803 139 60 0 chr5 76007431 76007582 -127077950 - L1MA4 LINE L1 -2 6298 6139 331 139 42 0 chr5 76007583 76007655 -127077877 - L1MA4 LINE L1 -225 6075 6001 488 345 48 23 chr5 76008299 76008696 -127076836 - L1ME3 LINE L1 -286 5876 5470 24 77 0 0 chr5 76008890 76008942 -127076590 + AT_rich Low_complexity Low_complexity 1 52 0 354 280 80 16 chr5 76009071 76009196 -127076336 - MLT1K LTR MaLR -325 263 131 252 322 23 11 chr5 76009286 76009373 -127076159 - MIR SINE MIR -162 100 13 31 26 0 0 chr5 76009948 76009986 -127075546 + AT_rich Low_complexity Low_complexity 1 38 0 1770 51 0 0 chr5 76011300 76011514 -127074018 - AluY SINE Alu -1 310 97 735 267 164 24 chr5 76012808 76013161 -127072371 + L1ME4a LINE L1 5501 5897 -224 235 213 106 0 chr5 76013199 76013246 -127072286 + L1ME4a LINE L1 5975 6026 -95 745 232 65 24 chr5 76013923 76014321 -127071211 + LTR16B LTR ERVL 1 464 0 1297 189 88 101 chr5 76014355 76014740 -127070792 + MLT1E2 LTR MaLR 179 559 -67 2549 30 3 10 chr5 76014740 76015040 -127070492 - AluY SINE Alu -13 298 1 1297 189 88 101 chr5 76015040 76015108 -127070424 + MLT1E2 LTR MaLR 559 626 0 2038 143 0 0 chr5 76016110 76016403 -127069129 + AluSx SINE Alu 1 293 -19 222 118 0 0 chr5 76016919 76016953 -127068579 + (TG)n Simple_repeat Simple_repeat 2 35 0 204 67 0 0 chr5 76016995 76017025 -127068507 + (CA)n Simple_repeat Simple_repeat 2 31 0 1642 236 156 24 chr5 76018005 76018555 -127066977 + MER69 DNA AcHobo 20 642 -584 932 189 49 25 chr5 76018553 76018898 -127066634 + MER69 DNA AcHobo 2038 2457 -69 * 1012 133 13 7 chr5 76018991 76019141 -127066391 - AluSg/x SINE Alu -24 285 135 31 76 0 0 chr5 76019217 76019283 -127066249 + AT_rich Low_complexity Low_complexity 1 66 0 1215 143 0 0 chr5 76019354 76019529 -127066003 - L1PA16 LINE L1 -9 6157 5983 283 338 119 9 chr5 76019550 76019979 -127065553 - L1M4 LINE L1 -1319 4827 4352 216 360 90 0 chr5 76020106 76020206 -127065326 + L2 LINE L2 3163 3271 -1 2248 93 17 7 chr5 76020596 76020898 -127064634 + AluSx SINE Alu 1 305 -7 597 194 8 22 chr5 76022569 76022703 -127062829 - MER94 DNA DNA 0 134 3 1095 178 0 0 chr5 76023336 76023510 -127062022 - MER46A DNA MER2_type 0 236 63 1707 64 0 0 chr5 76123608 76123850 -126961682 - AluY SINE Alu 0 322 81 343 244 23 23 chr5 76124409 76124495 -126961037 - L2 LINE L2 0 3313 3228 1817 141 30 14 chr5 76124612 76124909 -126960623 - AluJb SINE Alu -10 302 1 394 195 0 0 chr5 76124910 76124987 -126960545 + L1MC/D LINE L1 5362 5438 -2370 263 44 156 0 chr5 76125091 76125136 -126960396 - L1M LINE L1 -777 5401 5350 2391 98 3 3 chr5 76125177 76125483 -126960049 + AluSq SINE Alu 1 306 -7 839 156 0 7 chr5 76125506 76125641 -126959891 + AluJb SINE Alu 3 136 -176 2329 66 28 0 chr5 76125662 76125949 -126959583 + AluY SINE Alu 1 295 -16 1963 116 0 36 chr5 76125951 76126089 -126959443 + AluJb SINE Alu 1 142 -170 2118 144 0 3 chr5 76126089 76126402 -126959130 + AluSx SINE Alu 1 312 0 1963 116 0 36 chr5 76126402 76126565 -126958967 + AluJb SINE Alu 142 291 -21 361 228 67 67 chr5 76126565 76126714 -126958818 - L1MC/D LINE L1 -2023 5785 5637 420 299 75 0 chr5 76126715 76126849 -126958683 - MIR SINE MIR -78 184 41 561 128 0 0 chr5 76126964 76127050 -126958482 - AluJ/FRAM SINE Alu -9 303 218 579 237 7 7 chr5 76127168 76127303 -126958229 + AluJo SINE Alu 4 138 -174 2037 142 7 0 chr5 76127303 76127599 -126957933 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr5 76127604 76127631 -126957901 + AT_rich Low_complexity Low_complexity 1 27 0 236 277 107 27 chr5 76127887 76127999 -126957533 - MIR SINE MIR -22 240 120 213 209 0 0 chr5 76127999 76128042 -126957490 + MIR SINE MIR 72 114 -148 1857 138 20 14 chr5 76128634 76128930 -126956602 + AluJb SINE Alu 1 298 -14 806 173 0 15 chr5 76128979 76129112 -126956420 - FLAM_A SINE Alu -2 131 1 436 104 15 0 chr5 76129146 76129213 -126956319 + L1MC1 LINE L1 6266 6333 0 922 105 0 0 chr5 76129503 76129627 -126955905 - AluSg/x SINE Alu -1 311 188 2207 91 0 7 chr5 76129729 76130016 -126955516 - AluY SINE Alu -26 285 1 2464 151 31 2 chr5 76130066 76130526 -126955006 - MER1A DNA MER1_type -1 528 4 282 115 211 0 chr5 76130526 76130573 -126954959 - MER1A DNA MER1_type -469 58 1 1466 169 131 4 chr5 76130621 76130888 -126954644 + AluJo SINE Alu 2 302 0 2282 86 7 3 chr5 76131091 76131382 -126954150 - AluSx SINE Alu -20 292 1 249 274 63 0 chr5 76131424 76131519 -126954013 - L1MC4 LINE L1 -132 7910 7810 459 94 66 33 chr5 76131633 76132340 -126953192 + (TA)n Simple_repeat Simple_repeat 1 730 0 2392 81 0 0 chr5 76132340 76132625 -126952907 - AluSg SINE Alu -25 285 1 683 174 14 42 chr5 76132626 76132770 -126952762 - AluJo SINE Alu -171 141 2 83 29 0 0 chr5 76132846 76132950 -126952582 + AT_rich Low_complexity Low_complexity 1 104 0 923 135 0 0 chr5 76133373 76133506 -126952026 + FLAM_C SINE Alu 1 133 0 2352 104 0 0 chr5 76133577 76133876 -126951656 + AluSx SINE Alu 1 299 -13 552 191 36 12 chr5 76134195 76134363 -126951169 + GA-rich Low_complexity Low_complexity 4 175 0 2355 95 0 3 chr5 76134367 76134671 -126950861 + AluY SINE Alu 1 303 -8 890 188 61 20 chr5 76134680 76134877 -126950655 + L1ME3 LINE L1 5945 6149 -13 2300 105 0 0 chr5 76134893 76135188 -126950344 - AluSx SINE Alu -15 297 3 1056 157 30 40 chr5 76135188 76135386 -126950146 - AluJb SINE Alu -33 279 84 2304 78 14 3 chr5 76135396 76135692 -126949840 - AluSq SINE Alu -14 299 1 2122 113 0 23 chr5 76135746 76136070 -126949462 - AluSx SINE Alu 0 312 1 357 24 0 0 chr5 76136219 76136261 -126949271 + (TG)n Simple_repeat Simple_repeat 1 42 0 2447 69 0 38 chr5 76136758 76137078 -126948454 + AluY SINE Alu 1 308 -3 936 93 35 93 chr5 76137303 76137399 -126948133 - L1M3 LINE L1 -630 5550 5466 2091 104 11 4 chr5 76137399 76137698 -126947834 + AluSx SINE Alu 2 302 0 936 93 35 93 chr5 76137698 76137772 -126947760 - L1M3 LINE L1 -714 5466 5389 2264 111 10 7 chr5 76137873 76138179 -126947353 + AluSx SINE Alu 1 307 -5 1611 159 64 61 chr5 76138180 76138526 -126947006 - L1MB7 LINE L1 -150 6034 5688 1016 130 74 0 chr5 76138616 76138778 -126946754 + AluSg/x SINE Alu 138 311 -1 423 0 0 0 chr5 76138803 76138850 -126946682 + (CA)n Simple_repeat Simple_repeat 2 48 0 1006 119 126 0 chr5 76139235 76139386 -126946146 + AluSp SINE Alu 1 170 -143 1616 92 14 0 chr5 76139395 76139602 -126945930 + AluSg/x SINE Alu 90 299 -11 1387 94 10 5 chr5 76139602 76139794 -126945738 + AluSp SINE Alu 110 302 -11 2380 86 0 3 chr5 76139794 76140096 -126945436 + AluSg SINE Alu 1 301 -9 1455 196 16 26 chr5 76140861 76140996 -126944536 + AluJo SINE Alu 4 139 -173 2362 96 0 6 chr5 76140996 76141308 -126944224 + AluSg SINE Alu 1 310 0 1455 196 16 26 chr5 76141308 76141478 -126944054 + AluJo SINE Alu 139 306 -6 1572 133 92 0 chr5 76141580 76141820 -126943712 + AluSx SINE Alu 6 267 -45 1977 173 186 19 chr5 76141839 76142302 -126943230 - LTR49 LTR ERV1 -55 540 1 1772 180 0 20 chr5 76142385 76142691 -126942841 - AluJo SINE Alu -12 300 1 245 275 127 48 chr5 76142754 76142943 -126942589 + MLT1I LTR MaLR 5 208 -201 647 195 0 7 chr5 76142957 76143106 -126942426 + (TG)n Simple_repeat Simple_repeat 1 148 0 464 252 41 8 chr5 76143129 76143252 -126942280 + MLT1I LTR MaLR 244 370 -39 264 161 196 0 chr5 76143266 76143322 -126942210 + MLT1I LTR MaLR 335 401 -8 762 148 169 0 chr5 76143491 76143633 -126941899 + AluSg/x SINE Alu 135 300 -10 1869 166 7 10 chr5 76143768 76144075 -126941457 + AluJb SINE Alu 5 310 -2 1118 179 68 17 chr5 76144298 76144353 -126941179 - MER82 DNA MER2_type -400 253 202 5581 132 89 55 chr5 76144353 76144652 -126940880 + Tigger3b DNA MER2_type 1 288 -2740 2331 94 7 0 chr5 76144652 76144950 -126940582 + AluSq SINE Alu 1 300 -13 5581 132 89 55 chr5 76144950 76145586 -126939946 + Tigger3b DNA MER2_type 288 988 -2040 1953 136 21 3 chr5 76145586 76145873 -126939659 - AluSx SINE Alu -20 292 1 5581 132 89 55 chr5 76145873 76146126 -126939406 + Tigger3b DNA MER2_type 988 1231 0 1118 179 68 17 chr5 76146126 76146304 -126939228 - MER82 DNA MER2_type -451 202 8 1362 189 17 60 chr5 76146733 76147035 -126938497 + AluJo SINE Alu 1 289 -23 230 267 47 0 chr5 76147127 76147213 -126938319 + L1MC4 LINE L1 6614 6703 -1339 180 111 0 0 chr5 76147217 76147244 -126938288 + (TA)n Simple_repeat Simple_repeat 2 28 0 818 141 135 0 chr5 76147345 76147508 -126938024 - L1MD3 LINE L1 -67 7928 7744 1619 116 48 51 chr5 76148183 76148313 -126937219 + AluJo SINE Alu 6 135 -177 2419 63 10 7 chr5 76148313 76148613 -126936919 + AluY SINE Alu 1 301 -10 1619 116 48 51 chr5 76148613 76148774 -126936758 + AluJo SINE Alu 135 296 -16 1117 90 7 0 chr5 76148826 76148970 -126936562 + AluSq/x SINE Alu 1 145 -167 1884 163 17 0 chr5 76149784 76150078 -126935454 - AluJb SINE Alu -13 299 1 275 240 193 20 chr5 76150114 76150264 -126935268 + LTR33 LTR ERVL 342 517 -4 2297 82 7 7 chr5 76150502 76150796 -126934736 + AluY SINE Alu 1 294 -17 1960 135 40 10 chr5 76150808 76151105 -126934427 + AluSc SINE Alu 2 307 -2 1677 163 22 56 chr5 76151821 76151948 -126933584 + AluJb SINE Alu 4 134 -178 2178 129 0 0 chr5 76151948 76152242 -126933290 + AluSx SINE Alu 1 294 -18 1677 163 22 56 chr5 76152242 76152434 -126933098 + AluJb SINE Alu 134 312 0 2374 101 0 0 chr5 76152846 76153154 -126932378 + AluSg SINE Alu 1 308 -2 792 172 0 63 chr5 76153165 76153339 -126932193 + FRAM SINE Alu 1 163 -3 743 200 0 7 chr5 76153478 76153613 -126931919 - AluJb SINE Alu -38 274 141 897 134 29 2 chr5 76153626 76153785 -126931747 - L1PA12 LINE L1 -337 5831 5660 540 75 0 0 chr5 76153791 76153858 -126931674 - AluSp/q SINE Alu -22 291 225 406 292 143 29 chr5 76153868 76154284 -126931248 - L1MC4a LINE L1 -333 5788 5388 * 731 220 80 28 chr5 76154282 76154532 -126931000 + HAL1 LINE L1 1083 1345 -1162 639 229 0 0 chr5 76154537 76154668 -126930864 + FLAM_C SINE Alu 2 132 -11 2253 234 117 29 chr5 76154668 76155569 -126929963 + HAL1 LINE L1 1337 2316 -191 1673 188 27 0 chr5 76155616 76155909 -126929623 + AluJo SINE Alu 1 301 -11 2377 84 3 0 chr5 76155972 76156268 -126929264 - AluSq SINE Alu -12 301 5 2377 152 22 18 chr5 76156272 76156971 -126928561 - L1M3 LINE L1 -511 5669 4968 1899 179 31 11 chr5 76156972 76157428 -126928104 - MLT2B1 LTR ERVL -7 508 1 589 188 54 18 chr5 76157436 76157548 -126927984 - L1M3 LINE L1 -1176 4970 4855 2250 117 3 0 chr5 76157789 76158098 -126927434 + AluSx SINE Alu 1 310 -2 1423 118 212 12 chr5 76158267 76158522 -126927010 + AluSg1 SINE Alu 1 306 -3 1157 77 14 0 chr5 76158589 76158732 -126926800 + AluSp SINE Alu 15 159 -154 3295 165 27 57 chr5 76159368 76160037 -126925495 + L1MB7 LINE L1 5457 6104 -80 719 155 16 8 chr5 76160037 76160166 -126925366 - FLAM_C SINE Alu -1 132 3 3295 165 27 57 chr5 76160166 76160230 -126925302 + L1MB7 LINE L1 6104 6168 -16 325 206 98 0 chr5 76160230 76160322 -126925210 + L1MC4a LINE L1 5813 5913 -1895 4039 192 14 19 chr5 76161375 76162145 -126923387 + L1MB8 LINE L1 5276 6043 -135 2387 83 0 0 chr5 76162145 76162433 -126923099 - AluSg SINE Alu -18 292 5 4039 192 14 19 chr5 76162433 76162499 -126923033 + L1MB8 LINE L1 6043 6108 -70 249 127 218 0 chr5 76162546 76162601 -126922931 + L1MB8 LINE L1 6101 6167 -11 1890 151 0 7 chr5 76162607 76162898 -126922634 - AluJo SINE Alu -8 304 16 2237 100 0 13 chr5 76163670 76163971 -126921561 - AluY SINE Alu -14 297 1 1057 96 0 51 chr5 76164169 76164325 -126921207 - AluSg/x SINE Alu -80 230 83 647 177 43 0 chr5 76164793 76164934 -126920598 + MIR SINE MIR 52 198 -64 2531 73 0 3 chr5 76165246 76165548 -126919984 - AluY SINE Alu -10 301 1 2273 107 3 3 chr5 76165620 76165918 -126919614 - AluSq SINE Alu -14 299 2 315 0 0 0 chr5 76166430 76166465 -126919067 + (A)n Simple_repeat Simple_repeat 1 35 0 1766 193 129 14 chr5 76166844 76167263 -126918269 - MLT1C LTR MaLR 0 467 1 2011 101 6 89 chr5 76167333 76167660 -126917872 - AluSx SINE Alu -12 300 1 25 31 0 0 chr5 76167934 76167966 -126917566 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr5 76168076 76168099 -126917433 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2020 158 0 0 chr5 76168120 76168412 -126917120 - AluSx SINE Alu -20 292 1 2121 123 0 25 chr5 76168455 76168771 -126916761 - AluSx SINE Alu -4 308 1 288 288 110 0 chr5 76168936 76169054 -126916478 + MIR SINE MIR 70 200 -62 1897 151 3 16 chr5 76169228 76169540 -126915992 + AluSx SINE Alu 1 308 -4 822 145 0 0 chr5 76169540 76169657 -126915875 + AluSg/x SINE Alu 134 250 -62 21 0 0 0 chr5 76169891 76169912 -126915620 + AT_rich Low_complexity Low_complexity 1 21 0 2186 105 0 3 chr5 76169921 76170230 -126915302 + AluSx SINE Alu 1 308 0 2377 90 3 0 chr5 76170232 76170533 -126914999 + AluY SINE Alu 1 302 -9 2023 94 33 11 chr5 76170607 76170911 -126914621 + AluSx SINE Alu 1 310 0 241 261 52 97 chr5 76171685 76171745 -126913787 - MIR SINE MIR -111 151 90 2213 100 3 13 chr5 76171745 76172045 -126913487 + AluSg SINE Alu 1 297 -13 241 261 52 97 chr5 76172045 76172118 -126913414 - MIR SINE MIR -172 90 24 1993 138 7 3 chr5 76172274 76172565 -126912967 - AluSg SINE Alu -18 292 1 262 266 32 11 chr5 76172608 76172702 -126912830 + MLT1L LTR MaLR 512 607 -8 1226 104 74 207 chr5 76172844 76173182 -126912350 - 7SLRNA srpRNA srpRNA -27 293 1 258 343 10 20 chr5 76173182 76173300 -126912232 - MIR SINE MIR -61 147 35 1558 152 26 26 chr5 76173366 76173635 -126911897 - AluJb SINE Alu -7 305 37 2247 114 0 0 chr5 76173649 76173976 -126911556 - AluY SINE Alu 0 311 1 183 42 0 0 chr5 76173978 76174002 -126911530 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2131 116 0 3 chr5 76174002 76174287 -126911245 - AluSx SINE Alu -28 284 1 21 0 0 0 chr5 76174296 76174317 -126911215 + AT_rich Low_complexity Low_complexity 1 21 0 551 69 0 0 chr5 76174458 76174530 -126911002 + Alu SINE Alu 227 298 -14 2882 163 14 40 chr5 76174784 76174808 -126910724 - L1M4 LINE L1 -386 5792 5769 2177 113 7 0 chr5 76174808 76175099 -126910433 + AluSx SINE Alu 1 293 -19 2882 163 14 40 chr5 76175099 76175940 -126909592 - L1M4 LINE L1 -409 5769 4959 2286 116 3 0 chr5 76175940 76176251 -126909281 - AluSp SINE Alu 0 313 2 2882 163 14 40 chr5 76176251 76176321 -126909211 - L1M4 LINE L1 -1219 4959 4889 1171 29 14 0 chr5 76176321 76176510 -126909022 + L1PA7 LINE L1 6015 6205 0 1449 232 68 5 chr5 76176510 76176880 -126908652 - L1M4 LINE L1 -1242 4904 4512 1072 173 0 0 chr5 76176882 76177050 -126908482 - AluSg/x SINE Alu -14 298 131 2419 104 0 0 chr5 76177051 76177359 -126908173 - AluSg SINE Alu -2 308 1 2128 124 3 0 chr5 76177364 76177654 -126907878 - AluSx SINE Alu -21 291 1 2305 113 0 0 chr5 76177693 76177993 -126907539 - AluSx SINE Alu -12 300 1 392 243 0 10 chr5 76178023 76178126 -126907406 - L1M4 LINE L1 -2508 3638 3537 917 107 133 13 chr5 76178126 76178276 -126907256 + MSTA LTR MaLR 210 377 -51 2086 138 0 3 chr5 76178290 76178595 -126906937 + AluSq SINE Alu 2 305 -8 865 247 134 5 chr5 76178612 76179023 -126906509 - L1M4 LINE L1 -816 5330 3181 824 181 0 26 chr5 76179024 76179179 -126906353 - FAM SINE Alu -7 42 1 545 172 38 24 chr5 76179217 76179425 -126906107 - L1M4 LINE L1 -941 5205 4854 1575 193 3 3 chr5 76179431 76179721 -126905811 + AluJb SINE Alu 5 294 -18 1410 119 0 68 chr5 76179822 76180057 -126905475 - AluSg/x SINE Alu -6 304 86 2276 93 17 0 chr5 76180057 76180346 -126905186 - AluSx SINE Alu -18 294 1 975 174 0 0 chr5 76180356 76180505 -126905027 - AluSg/x SINE Alu -26 284 136 297 75 0 0 chr5 76180606 76180646 -126904886 + (GA)n Simple_repeat Simple_repeat 1 40 0 2185 108 7 0 chr5 76180911 76181207 -126904325 - AluSp SINE Alu -15 298 1 194 298 96 21 chr5 76182162 76182256 -126903276 + L2 LINE L2 3200 3300 -13 2161 112 0 3 chr5 76182295 76182589 -126902943 + AluSg SINE Alu 1 293 -17 1615 159 68 0 chr5 76182647 76182911 -126902621 + AluJo SINE Alu 1 282 -30 536 47 101 7 chr5 76182925 76183073 -126902459 + (TA)n Simple_repeat Simple_repeat 2 163 0 305 286 124 0 chr5 76183202 76183307 -126902225 + MIR SINE MIR 117 234 -28 2191 90 3 51 chr5 76183502 76183814 -126901718 - AluSq SINE Alu -16 297 1 2474 83 0 0 chr5 76184178 76184478 -126901054 - AluY SINE Alu -11 300 1 2263 118 0 13 chr5 76184955 76185270 -126900262 + AluSx SINE Alu 1 311 -1 2294 99 3 0 chr5 76186020 76186313 -126899219 + AluSg SINE Alu 1 294 -16 1363 112 6 0 chr5 76186593 76186771 -126898761 + AluSq SINE Alu 1 179 -134 286 132 0 0 chr5 76186899 76186952 -126898580 - AluSp/q SINE Alu -1 302 250 2251 113 0 3 chr5 76187054 76187355 -126898177 + AluSx SINE Alu 11 310 -2 232 136 15 76 chr5 76187358 76187424 -126898108 - L1ME4a LINE L1 0 6121 6060 1747 139 16 50 chr5 76187801 76188118 -126897414 + AluJo SINE Alu 1 306 -6 630 279 56 62 chr5 76188243 76188601 -126896931 + L2 LINE L2 2958 3313 0 2343 98 0 25 chr5 76188755 76189073 -126896459 + AluSx SINE Alu 1 310 -2 829 145 0 0 chr5 76189678 76189795 -126895737 + AluJ SINE Alu 1 117 -195 21 36 0 0 chr5 76189796 76189824 -126895708 + AT_rich Low_complexity Low_complexity 1 28 0 2171 100 3 10 chr5 76189824 76190114 -126895418 - AluSx SINE Alu -24 288 1 976 147 13 7 chr5 76190135 76190285 -126895247 + AluJ SINE Alu 118 268 -44 327 260 47 39 chr5 76190296 76190423 -126895109 - L1ME3A LINE L1 -4 6166 6039 527 294 57 6 chr5 76190454 76190631 -126894901 + MIR SINE MIR 3 188 -74 2272 92 3 0 chr5 76190656 76190962 -126894570 + AluSp SINE Alu 1 307 0 2419 95 3 0 chr5 76190965 76191271 -126894261 + AluSx SINE Alu 1 307 -5 1973 150 10 0 chr5 76191309 76191615 -126893917 + AluSx SINE Alu 2 310 -2 238 270 153 0 chr5 76192119 76192230 -126893302 - MIR SINE MIR -98 164 37 2500 80 3 0 chr5 76192284 76192586 -126892946 + AluSp SINE Alu 1 303 -10 1554 203 17 7 chr5 76192719 76193009 -126892523 + AluJo SINE Alu 1 293 -19 865 97 0 0 chr5 76193013 76193127 -126892405 + FLAM_C SINE Alu 5 118 -15 7142 57 1 0 chr5 76193377 76194832 -126890700 - L1PA8 LINE L1 -7 6165 4722 371 93 37 0 chr5 76194890 76194944 -126890588 - MSTB LTR MaLR 0 426 371 1907 126 65 0 chr5 76194973 76195250 -126890282 + AluSq SINE Alu 1 295 -18 2269 168 16 18 chr5 76195582 76195611 -126889921 - MSTB LTR MaLR -40 386 358 2441 94 0 0 chr5 76195611 76195920 -126889612 + AluSq SINE Alu 1 309 -4 2269 168 16 18 chr5 76195920 76196277 -126889255 - MSTB LTR MaLR -68 358 1 2190 155 15 35 chr5 76196421 76196821 -126888711 + LOR1b LTR ERV1 70 461 0 2426 84 3 3 chr5 76196917 76197228 -126888304 + AluY SINE Alu 1 311 0 454 278 151 45 chr5 76197326 76197678 -126887854 + MLT1K LTR MaLR 200 588 0 26 30 0 0 chr5 76197942 76197975 -126887557 + AT_rich Low_complexity Low_complexity 1 33 0 1668 153 0 0 chr5 76197981 76198222 -126887310 + AluSx SINE Alu 1 241 -71 6474 71 12 1 chr5 76198222 76199039 -126886493 - LTR12 LTR ERV1 0 826 1 360 145 0 0 chr5 76199041 76199103 -126886429 + AluSx SINE Alu 240 301 -1 1913 137 0 0 chr5 76199157 76199419 -126886113 + AluSg SINE Alu 1 262 -48 267 100 50 0 chr5 76199525 76199593 -126885939 + AluSg SINE Alu 243 312 0 1677 170 23 13 chr5 76200406 76200706 -126884826 + AluJb SINE Alu 1 303 -9 259 227 92 50 chr5 76200870 76200989 -126884543 + L3 LINE CR1 1307 1430 -147 35 63 0 0 chr5 76201884 76201947 -126883585 + AT_rich Low_complexity Low_complexity 1 63 0 2336 82 20 0 chr5 76202276 76202581 -126882951 + AluSx SINE Alu 1 311 -1 1415 193 57 18 chr5 76202997 76203277 -126882255 + AluJo SINE Alu 5 295 -17 2298 103 0 10 chr5 76203277 76203579 -126881953 - AluSq SINE Alu -14 299 1 275 307 73 40 chr5 76203643 76203793 -126881739 + MARNA DNA Mariner 22 176 -410 264 197 66 33 chr5 76204801 76204862 -126880670 - MER58 DNA MER1_type 0 2420 2358 1763 97 120 4 chr5 76205197 76205455 -126880077 - AluSg1 SINE Alu -21 288 1 1164 130 0 0 chr5 76205476 76205638 -126879894 - AluSg/x SINE Alu -15 295 134 2205 93 0 13 chr5 76205640 76205941 -126879591 - AluSx SINE Alu -15 297 1 259 100 0 24 chr5 76205941 76205988 -126879544 - Alu SINE Alu -260 40 1 189 0 0 0 chr5 76206004 76206025 -126879507 + (T)n Simple_repeat Simple_repeat 1 21 0 634 208 147 41 chr5 76206193 76206390 -126879142 - MER20 DNA MER1_type 0 219 2 1268 169 165 8 chr5 76206540 76206800 -126878732 + AluJb SINE Alu 1 301 -11 1692 152 22 14 chr5 76206987 76207264 -126878268 + AluJo SINE Alu 6 284 -28 2440 82 0 0 chr5 76207537 76207840 -126877692 + AluY SINE Alu 1 303 -8 1924 174 0 0 chr5 76207840 76208138 -126877394 + AluSx SINE Alu 1 298 -14 42 0 0 0 chr5 76208226 76208268 -126877264 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 76208378 76208399 -126877133 + AT_rich Low_complexity Low_complexity 1 21 0 285 109 0 0 chr5 76208983 76209029 -126876503 + (CAT)n Simple_repeat Simple_repeat 2 47 0 25 75 0 0 chr5 76209863 76209916 -126875616 + AT_rich Low_complexity Low_complexity 1 53 0 2012 96 0 0 chr5 76210800 76211050 -126874482 - AluSq SINE Alu -20 293 44 801 153 0 0 chr5 76211199 76211330 -126874202 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr5 76212543 76212564 -126872968 + GC_rich Low_complexity Low_complexity 1 21 0 2110 76 83 7 chr5 76213670 76213958 -126871574 - AluSq SINE Alu -3 310 1 31 26 0 0 chr5 76214906 76214944 -126870588 + AT_rich Low_complexity Low_complexity 1 38 0 1807 166 7 0 chr5 76215933 76216223 -126869309 - AluJo SINE Alu -20 292 1 1624 142 93 19 chr5 76216731 76216999 -126868533 + AluJb SINE Alu 1 288 -24 234 0 0 0 chr5 76216999 76217025 -126868507 + (T)n Simple_repeat Simple_repeat 1 26 0 1650 154 58 14 chr5 76218155 76218447 -126867085 + AluJo SINE Alu 5 309 -3 21 0 0 0 chr5 76218824 76218845 -126866687 + AT_rich Low_complexity Low_complexity 1 21 0 732 265 55 110 chr5 76218847 76219785 -126865747 - L1MC4 LINE L1 -131 7911 7040 1292 133 9 24 chr5 76219785 76219996 -126865536 - L1MC1 LINE L1 0 6333 6126 732 265 55 110 chr5 76219996 76220059 -126865473 - L1MC4 LINE L1 -1002 7040 6975 2182 124 13 0 chr5 76220065 76220364 -126865168 - AluSx SINE Alu -9 303 1 1351 144 0 0 chr5 76220692 76220893 -126864639 + AluSg/x SINE Alu 110 310 0 325 81 32 32 chr5 76220895 76220957 -126864575 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 188 128 0 43 chr5 76221644 76221691 -126863841 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 716 124 10 0 chr5 76221734 76221831 -126863701 + FLAM_C SINE Alu 33 130 -13 2273 85 3 16 chr5 76221838 76222143 -126863389 + AluY SINE Alu 1 301 -10 1450 210 71 0 chr5 76222826 76223107 -126862425 + AluJo SINE Alu 1 301 -1 1870 129 86 0 chr5 76223446 76223726 -126861806 - AluSx SINE Alu -7 305 2 1776 144 20 30 chr5 76223998 76224331 -126861201 - AluJb SINE Alu 0 312 1 506 275 85 25 chr5 76224408 76224644 -126860888 + L1MC4 LINE L1 7178 7427 -615 2439 62 0 23 chr5 76224834 76225139 -126860393 - AluY SINE Alu -13 298 1 1933 141 3 10 chr5 76225146 76225450 -126860082 - AluSx SINE Alu -10 302 1 21 36 0 0 chr5 76225848 76225876 -126859656 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 76226221 76226242 -126859290 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 76226425 76226462 -126859070 + AT_rich Low_complexity Low_complexity 1 37 0 509 208 0 0 chr5 76226693 76226799 -126858733 - L1MB2 LINE L1 0 6171 6066 2010 131 3 0 chr5 76226806 76227104 -126858428 - AluJo SINE Alu -13 299 1 180 175 100 0 chr5 76227299 76227339 -126858193 + MIR SINE MIR 170 213 -49 2242 106 3 7 chr5 76227456 76227757 -126857775 + AluSq SINE Alu 1 300 -13 842 196 26 0 chr5 76227757 76227910 -126857622 + AluJo/FRAM SINE Alu 134 290 -22 523 223 25 50 chr5 76227951 76228072 -126857460 + FLAM_A SINE Alu 8 125 -17 1735 156 35 7 chr5 76228505 76228788 -126856744 - AluJo SINE Alu -21 291 1 26 64 0 0 chr5 76228866 76228913 -126856619 + AT_rich Low_complexity Low_complexity 1 47 0 666 284 58 14 chr5 76229261 76229469 -126856063 + MIR SINE MIR 34 250 -12 2144 102 14 0 chr5 76229532 76229817 -126855715 - AluY SINE Alu -22 289 1 26 64 0 0 chr5 76229819 76229866 -126855666 + AT_rich Low_complexity Low_complexity 1 47 0 245 256 61 0 chr5 76230072 76230154 -126855378 - MIR SINE MIR -32 230 144 661 149 149 50 chr5 76230246 76230367 -126855165 + FLAM_C SINE Alu 1 133 0 541 261 144 20 chr5 76230434 76230554 -126854978 + MIR SINE MIR 14 118 -144 1561 167 24 17 chr5 76230554 76230848 -126854684 + AluJo SINE Alu 1 296 -16 1952 110 67 3 chr5 76230848 76231130 -126854402 + AluSx SINE Alu 1 300 -12 541 261 144 20 chr5 76231130 76231203 -126854329 + MIR SINE MIR 117 232 -30 1125 175 67 14 chr5 76231235 76231458 -126854074 - MER46A DNA MER2_type 0 236 2 23 33 0 0 chr5 76231659 76231689 -126853843 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 76232896 76232922 -126852610 + AT_rich Low_complexity Low_complexity 1 26 0 813 176 0 61 chr5 76233601 76233749 -126851783 - FLAM_C SINE Alu 0 143 5 708 197 7 54 chr5 76233792 76233939 -126851593 - FLAM_A SINE Alu -2 140 1 1637 167 7 33 chr5 76233942 76234248 -126851284 - AluJb SINE Alu -14 298 1 1048 197 78 0 chr5 76234430 76234623 -126850909 - MER3 DNA MER1_type 0 209 2 1625 150 45 21 chr5 76234668 76234955 -126850577 + AluJb SINE Alu 1 294 -18 1612 205 3 3 chr5 76235119 76235426 -126850106 + AluJo SINE Alu 1 307 -5 1050 126 25 0 chr5 76235426 76235585 -126849947 + L1MA3 LINE L1 6143 6305 0 256 241 51 66 chr5 76235598 76235735 -126849797 - L1MC4 LINE L1 -44 7998 7864 405 62 0 0 chr5 76235831 76235879 -126849653 - Alu SINE Alu -262 48 1 181 140 0 40 chr5 76235909 76235959 -126849573 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 288 175 48 0 chr5 76236454 76236517 -126849015 + L1MB7 LINE L1 6114 6179 -5 2271 106 6 3 chr5 76236710 76237022 -126848510 - AluSq SINE Alu 0 313 1 537 141 22 0 chr5 76237025 76237117 -126848415 - AluSg/x SINE Alu -3 306 213 742 154 0 0 chr5 76237218 76237328 -126848204 + FLAM_C SINE Alu 26 135 -8 259 81 0 0 chr5 76237387 76237424 -126848108 + L1MA8 LINE L1 6021 6057 -234 1376 122 16 63 chr5 76237462 76237547 -126847985 + L1MA8 LINE L1 6043 6130 -161 2350 81 0 0 chr5 76237547 76237845 -126847687 + AluY SINE Alu 1 298 -13 1376 122 16 63 chr5 76237845 76238014 -126847518 + L1MA8 LINE L1 6130 6285 -6 2193 111 0 3 chr5 76238236 76238534 -126846998 + AluSg SINE Alu 1 297 -13 198 0 0 0 chr5 76238580 76238602 -126846930 + (A)n Simple_repeat Simple_repeat 1 22 0 1011 126 0 50 chr5 76238604 76238763 -126846769 + AluJb SINE Alu 1 151 -161 852 214 62 19 chr5 76238768 76238978 -126846554 + AluJb SINE Alu 71 289 -23 456 263 125 13 chr5 76238992 76239144 -126846388 + MER102b DNA MER1_type 173 341 0 214 204 0 41 chr5 76239346 76239395 -126846137 + L2 LINE L2 3153 3199 -73 207 209 0 0 chr5 76239714 76239757 -126845775 + T-rich Low_complexity Low_complexity 2 44 0 1935 120 10 33 chr5 76239899 76240240 -126845292 - AluSc SINE Alu 0 309 1 2136 126 3 0 chr5 76240377 76240671 -126844861 + AluSx SINE Alu 1 295 -17 308 133 5 0 chr5 76240685 76240741 -126844791 + Alu SINE Alu 2 42 -259 2311 73 35 0 chr5 76240842 76241129 -126844403 + AluY SINE Alu 1 297 -14 2115 187 45 75 chr5 76241131 76241459 -126844073 - L1MD3 LINE L1 -29 8010 7719 780 164 0 57 chr5 76241459 76241599 -126843933 - FLAM_C SINE Alu -1 132 1 2115 187 45 75 chr5 76241599 76241867 -126843665 - L1MD3 LINE L1 -320 7719 7444 1784 147 3 51 chr5 76242098 76242412 -126843120 + AluJb SINE Alu 1 299 -13 1182 133 38 5 chr5 76242681 76242892 -126842640 + L1MA8 LINE L1 5112 5329 -817 1229 142 10 20 chr5 76242894 76242946 -126842586 + AluJb SINE Alu 85 136 -176 2245 108 0 3 chr5 76242946 76243252 -126842280 + AluSq SINE Alu 1 305 -8 1229 142 10 20 chr5 76243252 76243403 -126842129 + AluJb SINE Alu 136 286 -26 1410 144 54 36 chr5 76243403 76243681 -126841851 + L1MA8 LINE L1 5325 5607 -693 973 79 8 0 chr5 76243681 76243807 -126841725 + AluSg SINE Alu 1 127 -183 2363 99 3 0 chr5 76243844 76244147 -126841385 + AluSp SINE Alu 1 304 -9 3479 141 51 52 chr5 76244150 76244219 -126841313 + L1MA8 LINE L1 5600 5668 -623 2042 131 10 3 chr5 76244219 76244517 -126841015 + AluSx SINE Alu 1 300 -12 3479 141 51 52 chr5 76244517 76244959 -126840573 + L1MA8 LINE L1 5668 6112 -179 1853 164 0 20 chr5 76244959 76245263 -126840269 - AluJb SINE Alu -14 298 1 3479 141 51 52 chr5 76245263 76245437 -126840095 + L1MA8 LINE L1 6112 6285 -6 1928 120 0 0 chr5 76245456 76245715 -126839817 - AluSx SINE Alu -10 302 44 4714 193 119 21 chr5 76245869 76246021 -126839511 - L1M4 LINE L1 -4947 1908 1772 1939 125 87 0 chr5 76246021 76246308 -126839224 - AluSx SINE Alu 0 312 1 4714 193 119 21 chr5 76246308 76246963 -126838569 - L1M4 LINE L1 -5083 1772 1182 2224 118 10 3 chr5 76246963 76247269 -126838263 - AluSx SINE Alu -4 308 1 4714 193 119 21 chr5 76247269 76247817 -126837715 - L1M4 LINE L1 -5673 1182 407 955 228 94 40 chr5 76247823 76248099 -126837433 - L1M4 LINE L1 -6558 301 11 4762 158 40 0 chr5 76248127 76248935 -126836597 - L1MB2 LINE L1 -2 6169 5330 338 291 132 33 chr5 76249215 76249397 -126836135 - L3 LINE CR1 -1 1576 1377 324 0 0 0 chr5 76249428 76249464 -126836068 + (TA)n Simple_repeat Simple_repeat 1 36 0 2275 102 0 10 chr5 76249595 76249898 -126835634 + AluSq SINE Alu 1 300 -13 1263 80 0 6 chr5 76250420 76250583 -126834949 - AluY SINE Alu -10 301 140 2017 155 0 0 chr5 76250727 76251036 -126834496 - AluSx SINE Alu -3 309 1 317 309 120 69 chr5 76252188 76252564 -126832968 - L1M2 LINE L1 -5601 1248 854 22 0 0 0 chr5 76252577 76252599 -126832933 + GC_rich Low_complexity Low_complexity 1 22 0 695 213 25 35 chr5 76253748 76253950 -126831582 + L1MC5 LINE L1 7727 7926 -35 1462 239 73 33 chr5 76254001 76254630 -126830902 + L2 LINE L2 2608 3267 -46 1748 170 0 37 chr5 76254723 76254863 -126830669 + AluJo SINE Alu 1 145 -167 2420 77 14 0 chr5 76254863 76255160 -126830372 + AluY SINE Alu 1 301 -10 1748 170 0 37 chr5 76255160 76255343 -126830189 + AluJo SINE Alu 145 312 0 2161 119 7 7 chr5 76256115 76256425 -126829107 - AluSx SINE Alu 0 312 3 211 127 18 18 chr5 76258370 76258425 -126827107 + (TAA)n Simple_repeat Simple_repeat 3 57 0 921 160 0 0 chr5 76258832 76258963 -126826569 - FLAM_C SINE Alu -2 131 1 434 101 72 0 chr5 76258983 76259052 -126826480 - AluSc SINE Alu 0 309 236 7795 99 13 22 chr5 76259052 76260133 -126825399 + MER11C LTR ERVK 1 1071 0 1828 136 8 0 chr5 76260140 76260397 -126825135 - AluSx SINE Alu -53 259 1 195 42 0 0 chr5 76260441 76260465 -126825067 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1792 172 3 7 chr5 76260469 76260754 -126824778 - AluJb SINE Alu -22 290 7 1036 106 0 0 chr5 76260842 76260974 -126824558 - FLAM_C SINE Alu -11 132 1 2103 133 7 0 chr5 76261944 76262245 -126823287 + AluSx SINE Alu 1 303 -9 3222 14 0 0 chr5 76262258 76262602 -126822930 + L1PA2 LINE L1 5804 6147 -8 27 0 0 0 chr5 76262602 76262629 -126822903 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 76262777 76262798 -126822734 + AT_rich Low_complexity Low_complexity 1 21 0 2293 56 13 46 chr5 76262938 76263244 -126822288 - AluY SINE Alu -15 296 1 548 307 0 0 chr5 76263287 76263424 -126822108 + MIR SINE MIR 56 192 -70 25 65 0 0 chr5 76263435 76263481 -126822051 + AT_rich Low_complexity Low_complexity 1 46 0 408 20 0 0 chr5 76263523 76263572 -126821960 + (TTA)n Simple_repeat Simple_repeat 1 49 0 2320 75 0 0 chr5 76263572 76263850 -126821682 - AluSg SINE Alu -32 278 1 1240 152 71 14 chr5 76263964 76264175 -126821357 - AluJo SINE Alu -89 223 1 427 313 9 17 chr5 76264175 76264290 -126821242 + MIR SINE MIR 23 136 -126 24 0 0 0 chr5 76264329 76264353 -126821179 + AT_rich Low_complexity Low_complexity 1 24 0 920 102 0 15 chr5 76264616 76264753 -126820779 - AluSc SINE Alu -1 308 174 2164 114 3 0 chr5 76265050 76265340 -126820192 + AluSx SINE Alu 4 294 -18 22 0 0 0 chr5 76265417 76265439 -126820093 + AT_rich Low_complexity Low_complexity 1 22 0 1034 164 0 12 chr5 76266464 76266629 -126818903 + FRAM SINE Alu 1 163 -3 1108 176 11 0 chr5 76266658 76266846 -126818686 - AluJb SINE Alu -4 308 119 552 163 0 0 chr5 76266846 76266926 -126818606 + AluS SINE Alu 2 81 -232 2171 113 3 3 chr5 76467587 76467888 -126617644 + AluSq SINE Alu 1 301 -12 395 224 84 9 chr5 76467888 76467995 -126617537 + L2 LINE L2 3199 3313 0 619 211 41 14 chr5 76468830 76468977 -126616555 + MLT1J LTR MaLR 1 151 -360 966 126 76 5 chr5 76468991 76469213 -126616319 - AluSp SINE Alu 0 310 75 1617 206 3 3 chr5 76469321 76469613 -126615919 - AluJo SINE Alu -17 295 4 2494 62 10 3 chr5 76469736 76470044 -126615488 + AluSp SINE Alu 2 311 -2 1034 273 60 21 chr5 76470079 76470548 -126614984 + L1ME3A LINE L1 5465 5951 -219 2086 117 16 10 chr5 76470689 76470996 -126614536 - AluSx SINE Alu -3 309 1 841 156 0 0 chr5 76471174 76471302 -126614230 + FLAM_C SINE Alu 1 128 -5 987 225 63 107 chr5 76471676 76472165 -126613367 + HAL1 LINE L1 1437 1897 -610 2305 119 0 3 chr5 76472165 76472476 -126613056 + AluSx SINE Alu 1 310 -2 987 225 63 107 chr5 76472476 76472577 -126612955 + HAL1 LINE L1 1897 2001 -506 27 29 0 0 chr5 76472586 76472620 -126612912 + AT_rich Low_complexity Low_complexity 1 34 0 2438 63 3 25 chr5 76472680 76472996 -126612536 + AluY SINE Alu 1 309 -2 702 218 10 41 chr5 76473071 76473268 -126612264 + L1MB5 LINE L1 5903 6093 -81 2584 189 19 43 chr5 76473269 76473342 -126612190 + L1MB5 LINE L1 5536 5609 -565 2122 108 34 3 chr5 76473342 76473639 -126611893 + AluSx SINE Alu 1 306 -6 2584 189 19 43 chr5 76473639 76474184 -126611348 + L1MB5 LINE L1 5609 6140 -34 1761 175 7 10 chr5 76474184 76474492 -126611040 + AluJo SINE Alu 2 308 -4 2584 189 19 43 chr5 76474492 76474517 -126611015 + L1MB5 LINE L1 6140 6164 -10 294 305 0 14 chr5 76474521 76474662 -126610870 + HAL1 LINE L1 2012 2150 -357 1827 116 0 0 chr5 76474781 76475040 -126610492 - AluSx SINE Alu -12 300 42 396 0 0 0 chr5 76475161 76475205 -126610327 + (CA)n Simple_repeat Simple_repeat 2 45 0 27 29 0 0 chr5 76475909 76475943 -126609589 + AT_rich Low_complexity Low_complexity 1 34 0 394 136 38 0 chr5 76475969 76476101 -126609431 + (TA)n Simple_repeat Simple_repeat 1 137 0 2514 64 0 0 chr5 76476374 76476672 -126608860 - AluY SINE Alu -13 298 1 226 349 75 9 chr5 76477614 76477720 -126607812 - L2 LINE L2 0 3313 3201 350 241 0 37 chr5 76477842 76477950 -126607582 - MER102a DNA MER1_type -13 317 214 1891 186 0 19 chr5 76478134 76478452 -126607080 - AluJb SINE Alu 0 312 1 31 26 0 0 chr5 76478891 76478929 -126606603 + AT_rich Low_complexity Low_complexity 1 38 0 31 26 0 0 chr5 76479249 76479287 -126606245 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr5 76479311 76479344 -126606188 + AT_rich Low_complexity Low_complexity 1 33 0 2080 137 7 0 chr5 76479402 76479701 -126605831 - AluSx SINE Alu -11 301 1 22 56 0 0 chr5 76479743 76479779 -126605753 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr5 76480634 76480659 -126604873 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 76480790 76480819 -126604713 + AT_rich Low_complexity Low_complexity 1 29 0 2238 75 24 14 chr5 76480924 76481216 -126604316 + AluSx SINE Alu 1 295 -17 2455 52 0 0 chr5 76481957 76482247 -126603285 + AluY SINE Alu 1 290 -21 2035 109 34 10 chr5 76482377 76482671 -126602861 - AluSp SINE Alu -12 301 1 1057 132 0 38 chr5 76484339 76484498 -126601034 + FRAM SINE Alu 1 152 -24 2241 79 10 3 chr5 76484601 76484892 -126600640 - AluSx SINE Alu -19 293 1 2322 93 0 0 chr5 76485345 76485634 -126599898 - AluSx SINE Alu -23 289 1 2387 88 7 0 chr5 76486145 76486451 -126599081 + AluSx SINE Alu 1 308 -4 1882 58 0 38 chr5 76487170 76487410 -126598122 - AluY SINE Alu -12 299 69 2332 103 0 0 chr5 76487535 76487846 -126597686 + AluSq SINE Alu 1 311 -2 1852 154 27 0 chr5 76487943 76488236 -126597296 - AluJo SINE Alu -11 301 1 1974 238 114 27 chr5 76488282 76489183 -126596349 - HAL1 LINE L1 -191 2316 1337 651 220 0 0 chr5 76489183 76489315 -126596217 - FLAM_C SINE Alu -11 132 1 560 233 84 28 chr5 76489319 76489568 -126595964 - HAL1 LINE L1 -1162 1345 1083 376 270 137 30 chr5 76489566 76489912 -126595620 + L1MC/D LINE L1 5388 5777 -346 * 1698 89 128 8 chr5 76490071 76490329 -126595203 - AluSg SINE Alu -16 294 6 2272 108 3 0 chr5 76490489 76490784 -126594748 - AluSp SINE Alu -17 296 1 658 137 0 0 chr5 76490784 76490886 -126594646 - AluJo/FLAM SINE Alu -179 133 32 498 171 0 0 chr5 76490984 76491066 -126594466 - MER63 DNA MER1_type -89 747 40 2090 91 52 3 chr5 76492206 76492493 -126593039 + AluSq SINE Alu 1 301 -12 682 183 48 24 chr5 76492512 76492638 -126592894 - FLAM_C SINE Alu -12 131 3 2154 112 0 0 chr5 76492715 76492991 -126592541 - AluSx SINE Alu -13 299 24 1919 128 36 82 chr5 76493091 76493369 -126592163 + Tigger1 DNA MER2_type 2025 2279 -139 1832 72 140 4 chr5 76493369 76493634 -126591898 - AluY SINE Alu 0 301 1 1919 128 36 82 chr5 76493634 76493768 -126591764 + Tigger1 DNA MER2_type 2279 2418 0 737 119 0 34 chr5 76493757 76493788 -126591744 + Tigger7 DNA MER2_type 2473 2504 -83 * 1881 167 39 0 chr5 76493788 76494118 -126591414 - MER2 DNA MER2_type -1 343 1 737 119 0 34 chr5 76494118 76494204 -126591328 + Tigger7 DNA MER2_type 2504 2586 -1 394 282 17 17 chr5 76494358 76494475 -126591057 + L2 LINE L2 3188 3304 -9 25 0 0 0 chr5 76495068 76495093 -126590439 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 76495113 76495135 -126590397 + AT_rich Low_complexity Low_complexity 1 22 0 724 197 8 0 chr5 76495365 76495482 -126590050 + FLAM_C SINE Alu 1 118 -15 195 42 0 0 chr5 76495494 76495518 -126590014 + (TAA)n Simple_repeat Simple_repeat 2 25 0 231 277 69 0 chr5 76495907 76496008 -126589524 - L1ME4a LINE L1 -15 6106 5999 2487 66 0 0 chr5 76496071 76496374 -126589158 + AluY SINE Alu 1 303 -8 25 0 0 0 chr5 76496377 76496402 -126589130 + AT_rich Low_complexity Low_complexity 1 25 0 2073 125 0 7 chr5 76496410 76496725 -126588807 + AluSx SINE Alu 1 313 0 2322 86 3 10 chr5 76496845 76497149 -126588383 - AluSg SINE Alu -8 302 1 391 287 84 0 chr5 76497337 76497480 -126588052 + MIR SINE MIR 107 261 -1 32 57 0 0 chr5 76497506 76497559 -126587973 + AT_rich Low_complexity Low_complexity 1 53 0 1106 158 28 0 chr5 76497903 76498080 -126587452 + AluSg/x SINE Alu 122 303 -9 308 197 0 0 chr5 76498471 76498532 -126587000 + L1MC4a LINE L1 5819 5879 -1929 1610 183 65 0 chr5 76498747 76499069 -126586463 - MER7A DNA MER2_type -5 341 1 21 57 0 0 chr5 76499095 76499130 -126586402 + AT_rich Low_complexity Low_complexity 1 35 0 2584 234 50 70 chr5 76499140 76499734 -126585798 + L1MEc LINE L1 19 623 -5773 216 0 0 0 chr5 76499734 76499758 -126585774 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2584 234 50 70 chr5 76499758 76500076 -126585456 + L1MEc LINE L1 623 910 -5486 1907 161 7 0 chr5 76500076 76500374 -126585158 + AluSx SINE Alu 1 300 -12 2584 234 50 70 chr5 76500374 76500505 -126585027 + L1MEc LINE L1 910 1042 -5354 910 134 14 7 chr5 76500668 76500810 -126584722 - BC200 scRNA scRNA -57 143 1 1753 186 7 3 chr5 76500848 76501154 -126584378 - AluJb SINE Alu -4 308 2 2556 59 0 3 chr5 76501206 76501510 -126584022 - AluY SINE Alu -8 303 1 1489 222 39 87 chr5 76501511 76501857 -126583675 - L1MEc LINE L1 -4072 2649 2288 1993 138 0 7 chr5 76501857 76502148 -126583384 + AluSx SINE Alu 1 289 -23 1489 222 39 87 chr5 76502148 76502441 -126583091 - L1MEc LINE L1 -4433 2288 2047 2323 109 0 0 chr5 76502441 76502744 -126582788 - AluSg SINE Alu -7 303 1 1489 222 39 87 chr5 76502744 76502829 -126582703 - L1MEc LINE L1 -4674 2047 1959 1224 184 184 0 chr5 76503044 76503300 -126582232 + AluSx SINE Alu 1 303 -9 1606 174 47 27 chr5 76503556 76503855 -126581677 - AluJb SINE Alu -6 306 2 2141 113 3 0 chr5 76503871 76504190 -126581342 - AluSq SINE Alu 0 320 1 2004 141 0 20 chr5 76504193 76504497 -126581035 - AluSx SINE Alu -10 302 5 774 165 55 38 chr5 76504512 76504749 -126580783 - L1MD3 LINE L1 0 7995 7755 724 172 0 37 chr5 76505018 76505180 -126580352 + FLAM_C SINE Alu 1 157 0 314 356 77 0 chr5 76505424 76505528 -126580004 - L2 LINE L2 -8 3264 3153 1957 153 0 0 chr5 76506642 76506962 -126578570 - AluJb SINE Alu 0 320 1 25 0 0 0 chr5 76509555 76509580 -126575952 + AT_rich Low_complexity Low_complexity 1 25 0 334 224 103 36 chr5 76509727 76509893 -126575639 - L1 LINE L1 -1631 4515 4337 363 243 66 7 chr5 76509895 76510047 -126575485 - L1MEc LINE L1 -4826 1714 1554 * 2600 146 82 88 chr5 76510040 76510190 -126575342 - L1MB4 LINE L1 -2 6178 6029 2315 93 3 3 chr5 76510190 76510502 -126575030 + AluSx SINE Alu 1 312 0 2600 146 82 88 chr5 76510502 76511044 -126574488 - L1MB4 LINE L1 -151 6029 5490 1342 160 58 0 chr5 76511045 76511320 -126574212 - AluSx SINE Alu -16 296 6 23 33 0 0 chr5 76511932 76511962 -126573570 + AT_rich Low_complexity Low_complexity 1 30 0 2281 89 7 3 chr5 76512305 76512609 -126572923 - AluSc SINE Alu -4 305 1 451 251 71 66 chr5 76513225 76513436 -126572096 - MLT1K LTR MaLR -310 278 67 2034 110 47 7 chr5 76513488 76513787 -126571745 - AluSx SINE Alu -1 311 1 511 314 38 22 chr5 76513978 76514163 -126571369 + MIR3 SINE MIR 15 202 -6 26 0 0 0 chr5 76514348 76514374 -126571158 + AT_rich Low_complexity Low_complexity 1 26 0 295 265 78 0 chr5 76514706 76514808 -126570724 - MER104 DNA Tc2 0 180 71 1639 166 4 19 chr5 76514871 76515142 -126570390 + AluJb SINE Alu 1 267 -45 43 20 0 0 chr5 76515142 76515192 -126570340 + AT_rich Low_complexity Low_complexity 1 50 0 1369 246 105 22 chr5 76515199 76515484 -126570048 - HsTC2 DNA Tc2 -1351 547 287 2000 146 0 3 chr5 76515484 76515786 -126569746 - AluSq SINE Alu -12 301 1 1369 246 105 22 chr5 76515786 76516005 -126569527 - HsTC2 DNA Tc2 -1611 287 1 23 0 0 0 chr5 76516565 76516588 -126568944 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 76516625 76516669 -126568863 + AT_rich Low_complexity Low_complexity 1 44 0 269 75 0 0 chr5 76516709 76516749 -126568783 - MADE1 DNA Mariner -35 45 6 360 0 0 0 chr5 76516841 76516959 -126568573 + (CA)n Simple_repeat Simple_repeat 1 158 0 360 0 0 0 chr5 76516959 76516999 -126568533 + (CA)n Simple_repeat Simple_repeat 2 41 0 1772 123 8 4 chr5 76517012 76517264 -126568268 - AluSx SINE Alu -23 289 37 2058 176 83 19 chr5 76517613 76518033 -126567499 + MER44D DNA MER2_type 2 503 -102 10078 125 31 28 chr5 76518033 76518643 -126566889 + Tigger1 DNA MER2_type 2 609 -1809 1587 168 13 52 chr5 76518643 76518952 -126566580 + AluJo SINE Alu 1 297 -15 10078 125 31 28 chr5 76518952 76519236 -126566296 + Tigger1 DNA MER2_type 609 891 -1527 2314 97 0 3 chr5 76519236 76519535 -126565997 + AluSg SINE Alu 1 298 -12 10078 125 31 28 chr5 76519535 76519635 -126565897 + Tigger1 DNA MER2_type 891 989 -1429 1750 152 26 20 chr5 76519635 76519938 -126565594 - AluJo SINE Alu -7 305 1 10078 125 31 28 chr5 76519938 76520555 -126564977 + Tigger1 DNA MER2_type 989 1620 -798 2212 112 3 0 chr5 76520555 76520851 -126564681 + AluSx SINE Alu 1 297 -15 1020 98 0 0 chr5 76520977 76521109 -126564423 - AluSp SINE Alu -181 132 1 2194 52 39 62 chr5 76521209 76521518 -126564014 - AluY SINE Alu -9 302 1 2039 121 0 7 chr5 76521575 76521864 -126563668 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr5 76521864 76521887 -126563645 + AT_rich Low_complexity Low_complexity 1 23 0 2439 70 3 35 chr5 76521947 76522261 -126563271 + AluY SINE Alu 1 304 -7 304 107 119 107 chr5 76522473 76522557 -126562975 - L1MC3 LINE L1 -526 7259 7175 878 194 44 19 chr5 76522598 76522804 -126562728 - L1MC3 LINE L1 -717 7068 6858 416 285 77 43 chr5 76522955 76523083 -126562449 - L1ME LINE L1 -330 5791 5650 2425 92 0 0 chr5 76523083 76523388 -126562144 - AluSx SINE Alu -7 305 1 416 285 77 43 chr5 76523388 76523494 -126562038 - L1ME LINE L1 -471 5650 5549 1563 223 129 62 chr5 76524599 76524940 -126560592 - L1ME3A LINE L1 -1 6169 5853 2080 113 25 0 chr5 76524940 76525222 -126560310 - AluSx SINE Alu -23 289 1 1563 223 129 62 chr5 76525222 76525234 -126560298 - L1ME3A LINE L1 -317 5853 5843 2287 104 0 0 chr5 76525234 76525532 -126560000 - AluSx SINE Alu -14 298 1 1563 223 129 62 chr5 76525532 76525832 -126559700 - L1ME3A LINE L1 -327 5843 5472 29 28 0 0 chr5 76525837 76525873 -126559659 + AT_rich Low_complexity Low_complexity 1 36 0 932 199 0 6 chr5 76525874 76526040 -126559492 + FRAM SINE Alu 1 162 -14 276 261 11 11 chr5 76526902 76526990 -126558542 - MIR SINE MIR -56 206 119 2273 106 7 0 chr5 76527837 76528130 -126557402 - AluSg SINE Alu -15 295 1 198 0 0 0 chr5 76528133 76528155 -126557377 + (TG)n Simple_repeat Simple_repeat 2 23 0 2454 75 0 16 chr5 76528156 76528463 -126557069 - AluSp SINE Alu -11 302 1 290 318 142 14 chr5 76528859 76529007 -126556525 + MIR3 SINE MIR 35 201 -7 350 267 117 21 chr5 76529305 76529481 -126556051 - MIR SINE MIR -58 204 22 356 192 71 20 chr5 76530159 76530258 -126555274 + MIR SINE MIR 66 169 -93 291 214 135 22 chr5 76531420 76531509 -126554023 - MIR SINE MIR -117 145 47 525 235 309 0 chr5 76531739 76532011 -126553521 + L2 LINE L2 2307 2662 -652 * 1190 276 120 7 chr5 76531993 76532211 -126553321 + L2 LINE L2 2817 3009 -304 1850 93 45 31 chr5 76532211 76532500 -126553032 - AluSx SINE Alu -19 293 1 1190 276 120 7 chr5 76532500 76532723 -126552809 + L2 LINE L2 3009 3308 -5 2384 65 3 0 chr5 76533658 76533949 -126551583 - AluSc SINE Alu -17 292 1 237 231 115 111 chr5 76533989 76534162 -126551370 - L3 LINE CR1 -26 1551 1375 1959 109 16 26 chr5 76534162 76534466 -126551066 + AluSx SINE Alu 1 301 -11 237 231 115 111 chr5 76534466 76534500 -126551032 - L3 LINE CR1 -202 1375 1343 30 0 0 0 chr5 76534510 76534540 -126550992 + AT_rich Low_complexity Low_complexity 1 30 0 1471 170 65 4 chr5 76534547 76534824 -126550708 - AluJo SINE Alu -17 295 2 2115 118 14 0 chr5 76534927 76535224 -126550308 + AluSq SINE Alu 1 301 -12 519 108 27 0 chr5 76535348 76535422 -126550110 - AluS SINE Alu -233 79 4 1315 154 193 27 chr5 76535445 76535704 -126549828 - AluSq SINE Alu -1 302 1 1987 132 10 7 chr5 76535707 76536011 -126549521 - AluSx SINE Alu -7 305 1 3069 142 16 59 chr5 76536031 76536313 -126549219 - L1PA16 LINE L1 0 6166 5920 1906 104 4 15 chr5 76536313 76536573 -126548959 - AluSq SINE Alu -56 257 1 3069 142 16 59 chr5 76536573 76536862 -126548670 - L1PA16 LINE L1 -246 5920 5620 1574 98 4 55 chr5 76536862 76537117 -126548415 + L1PA16 LINE L1 5359 5600 -566 1907 234 28 26 chr5 76537735 76538011 -126547521 - L1MB8 LINE L1 0 6178 5899 2009 140 108 3 chr5 76538011 76538325 -126547207 + MER7A DNA MER2_type 1 345 -1 1907 234 28 26 chr5 76538325 76538577 -126546955 - L1MB8 LINE L1 -279 5899 5649 946 114 0 0 chr5 76539297 76539420 -126546112 + FLAM_C SINE Alu 1 123 -20 505 264 47 7 chr5 76540248 76540396 -126545136 - AluJo SINE Alu -157 155 2 1699 155 9 44 chr5 76540399 76540620 -126544912 - AluJo SINE Alu -7 305 97 2434 80 3 3 chr5 76540620 76540932 -126544600 - AluSx SINE Alu 0 312 1 1699 155 9 44 chr5 76540932 76541026 -126544506 - AluJo SINE Alu -215 97 1 1788 180 77 29 chr5 76541034 76541603 -126543929 - L1M4 LINE L1 -698 5480 4886 2405 93 0 16 chr5 76541603 76541915 -126543617 - AluSg SINE Alu -3 307 1 708 271 42 58 chr5 76542487 76542574 -126542958 - MIR SINE MIR -15 247 160 2396 55 14 0 chr5 76542574 76542894 -126542638 - AluY SINE Alu 0 325 2 708 271 42 58 chr5 76542894 76543045 -126542487 - MIR SINE MIR -102 160 12 2117 99 3 75 chr5 76543050 76543383 -126542149 + AluSq SINE Alu 1 309 -4 811 134 27 0 chr5 76543632 76543744 -126541788 - AluSq/x SINE Alu -190 122 8 660 165 0 0 chr5 76543987 76544078 -126541454 + FLAM_A SINE Alu 1 91 -51 21 0 0 0 chr5 76544258 76544279 -126541253 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr5 76544311 76544332 -126541200 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2123 123 0 13 chr5 76545162 76545464 -126540068 + AluSx SINE Alu 1 298 -14 554 121 36 121 chr5 76545496 76545636 -126539896 + L1MA9 LINE L1 6185 6312 0 975 242 158 83 chr5 76545922 76545995 -126539537 - LTR41 LTR ERVL -3 770 704 2139 90 0 60 chr5 76545995 76546318 -126539214 + AluSx SINE Alu 1 305 0 2420 149 8 0 chr5 76546321 76546683 -126538849 - MER47A DNA MER2_type -1 365 1 975 242 158 83 chr5 76546683 76547315 -126538217 - LTR41 LTR ERVL -70 703 7 2366 93 3 0 chr5 76547584 76547884 -126537648 + AluSp SINE Alu 1 301 -12 259 146 0 0 chr5 76547971 76548012 -126537520 + MER58 DNA MER1_type 54 94 -247 300 136 85 0 chr5 76548013 76548072 -126537460 + MER58 DNA MER1_type 2341 2404 -16 281 274 126 15 chr5 76548106 76548241 -126537291 + L2 LINE L2 101 250 -3064 1826 147 99 31 chr5 76548275 76548628 -126536904 - MSTA LTR MaLR -51 377 1 9651 164 36 10 chr5 76548628 76550095 -126535437 - MSTA-int LTR MaLR 0 1651 137 2397 87 3 7 chr5 76550095 76550405 -126535127 + AluSx SINE Alu 2 310 -2 9651 164 36 10 chr5 76550405 76550546 -126534986 - MSTA-int LTR MaLR -1514 137 1 1473 116 23 9 chr5 76550546 76550762 -126534770 - MSTA LTR MaLR 0 428 210 308 270 175 0 chr5 76550767 76550904 -126534628 + L2 LINE L2 210 370 -2944 2954 251 140 29 chr5 76551083 76551560 -126533972 + L2 LINE L2 1771 2193 -1121 868 149 0 15 chr5 76551560 76551694 -126533838 - FLAM_C SINE Alu -1 132 1 2954 251 140 29 chr5 76551694 76552301 -126533231 + L2 LINE L2 2193 2976 -338 2361 154 50 90 chr5 76552312 76552635 -126532897 + Looper DNA T2_type 870 1158 -400 630 203 49 8 chr5 76552635 76552758 -126532774 + FLAM_A SINE Alu 3 130 -3 2361 154 50 90 chr5 76552758 76553058 -126532474 + Looper DNA T2_type 1158 1468 -90 572 43 0 0 chr5 76553061 76553130 -126532402 - AluY SINE Alu -248 70 2 418 174 81 0 chr5 76553414 76553500 -126532032 + MER5A DNA MER1_type 2 94 -95 2869 104 150 27 chr5 76554753 76555026 -126530506 - Tigger3b DNA MER2_type -1798 1230 992 2022 89 33 4 chr5 76555026 76555296 -126530236 + AluSp SINE Alu 4 281 -32 261 0 0 0 chr5 76555296 76555325 -126530207 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2869 104 150 27 chr5 76555325 76555569 -126529963 - Tigger3b DNA MER2_type -2035 993 648 2236 117 0 0 chr5 76555569 76555867 -126529665 + AluSx SINE Alu 1 298 -14 2417 76 0 13 chr5 76555867 76556182 -126529350 + AluY SINE Alu 1 311 0 465 187 0 33 chr5 76556195 76556286 -126529246 + FLAM_A SINE Alu 2 89 -53 1714 142 0 88 chr5 76556370 76556709 -126528823 - AluJo SINE Alu -3 309 1 436 145 0 0 chr5 76556710 76556772 -126528760 - AluS SINE Alu -219 93 32 252 159 0 29 chr5 76556772 76556838 -126528694 - Tigger3b DNA MER2_type -637 595 532 281 167 0 0 chr5 76556838 76556880 -126528652 + Alu SINE Alu 1 42 -261 545 104 52 0 chr5 76556880 76556957 -126528575 + AluJ/FRAM SINE Alu 216 296 -16 189 0 0 0 chr5 76556960 76556981 -126528551 + (CA)n Simple_repeat Simple_repeat 2 22 0 1820 94 109 54 chr5 76556986 76557317 -126528215 - Tigger3b DNA MER2_type -687 544 196 2333 95 0 7 chr5 76557482 76557788 -126527744 - AluSx SINE Alu -8 304 1 1292 194 7 26 chr5 76558024 76558297 -126527235 - AluJo SINE Alu -7 305 38 750 126 0 0 chr5 76558341 76558444 -126527088 - U13 snRNA snRNA 0 104 2 1928 166 0 0 chr5 76558822 76559123 -126526409 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr5 76559207 76559228 -126526304 + AT_rich Low_complexity Low_complexity 1 21 0 502 286 105 49 chr5 76559242 76559285 -126526247 - L1MC/D LINE L1 -1987 5821 5782 2027 123 26 23 chr5 76559285 76559594 -126525938 - AluSx SINE Alu -2 310 1 502 286 105 49 chr5 76559594 76559816 -126525716 - L1MC/D LINE L1 -2026 5782 5541 696 234 75 54 chr5 76560253 76560531 -126525001 - L1ME3 LINE L1 -16 6146 5863 857 114 0 45 chr5 76560872 76561004 -126524528 + FLAM_C SINE Alu 5 130 -3 294 254 166 55 chr5 76561013 76561194 -126524338 - MLT1K LTR MaLR -47 541 341 180 0 0 0 chr5 76561197 76561217 -126524315 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 938 179 0 0 chr5 76561221 76561372 -126524160 - AluJo/FRAM SINE Alu -24 288 138 2062 148 0 10 chr5 76561373 76561684 -126523848 - AluSx SINE Alu -4 308 1 301 212 280 25 chr5 76562054 76562172 -126523360 + MLT1K LTR MaLR 157 304 -284 509 148 0 25 chr5 76562210 76562291 -126523241 + AluJo SINE Alu 86 164 -148 614 189 0 33 chr5 76562704 76562826 -126522706 - AluSg/x SINE Alu -17 292 175 183 316 79 40 chr5 76562927 76563079 -126522453 + L2 LINE L2 2355 2512 -802 271 333 20 61 chr5 76563114 76563312 -126522220 + L2 LINE L2 2592 2781 -533 190 335 110 6 chr5 76563545 76563709 -126521823 + L2 LINE L2 3131 3311 -2 4488 214 50 10 chr5 76564274 76564468 -126521064 + L1PB4 LINE L1 4188 4373 -1781 315 0 0 0 chr5 76564468 76564503 -126521029 + (CA)n Simple_repeat Simple_repeat 2 36 0 4488 214 50 10 chr5 76564503 76565508 -126520024 + L1PB4 LINE L1 4373 5429 -725 2688 101 11 19 chr5 76565518 76565896 -126519636 - THE1C LTR MaLR 0 375 1 22 94 0 0 chr5 76566241 76566305 -126519227 + AT_rich Low_complexity Low_complexity 1 64 0 2410 205 11 51 chr5 76566307 76567160 -126518372 - L1PB4 LINE L1 -613 5543 4731 1234 167 32 86 chr5 76567141 76567489 -126518043 + L1PB4 LINE L1 5527 5855 -301 * 819 233 11 0 chr5 76567504 76567680 -126517852 - MSTD LTR MaLR 0 396 219 24 32 0 0 chr5 76567844 76567875 -126517657 + AT_rich Low_complexity Low_complexity 1 31 0 211 125 0 25 chr5 76569102 76569142 -126516390 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 812 212 35 19 chr5 76569306 76569499 -126516033 - L1MA7 LINE L1 -166 6136 5935 654 189 57 0 chr5 76569499 76569655 -126515877 + L1MA7 LINE L1 6119 6286 -5 812 212 35 19 chr5 76569655 76569677 -126515855 - L1MA7 LINE L1 -367 5935 5915 1317 230 39 17 chr5 76569893 76570250 -126515282 - MLT1A1 LTR MaLR 0 365 1 1946 203 22 20 chr5 76570250 76570659 -126514873 - MLT1A1-int LTR MaLR 0 1735 1326 2266 230 72 30 chr5 76571003 76571762 -126513770 - MLT1A1-int LTR MaLR -488 883 1 1198 225 30 58 chr5 76571764 76572128 -126513404 - MLT1A1 LTR MaLR -2 363 10 666 156 136 13 chr5 76573488 76573642 -126511890 - Tigger7 DNA MER2_type -2 2489 2317 544 126 81 36 chr5 76573904 76574015 -126511517 - Tigger7 DNA MER2_type -163 2424 2309 573 234 110 7 chr5 76574034 76574179 -126511353 - Tigger7 DNA MER2_type -2327 160 1 24 0 0 0 chr5 76575191 76575215 -126510317 + AT_rich Low_complexity Low_complexity 1 24 0 269 26 26 0 chr5 76575277 76575315 -126510217 + (TA)n Simple_repeat Simple_repeat 2 40 0 4942 128 28 5 chr5 76575436 76576236 -126509296 - L1MA3 LINE L1 -35 6270 5453 252 370 19 9 chr5 76576354 76576462 -126509070 - L2 LINE L2 -6 3307 3199 1518 163 40 72 chr5 76576607 76576981 -126508551 + THE1B LTR MaLR 1 362 -2 1598 222 175 30 chr5 76577590 76578189 -126507343 + MER76 LTR ERV 1 686 -2 181 340 71 61 chr5 76578311 76578508 -126507024 - L2 LINE L2 -86 3227 3029 422 41 55 0 chr5 76578654 76578727 -126506805 + (TA)n Simple_repeat Simple_repeat 1 77 0 300 330 35 4 chr5 76578915 76579076 -126506456 + L1ME LINE L1 5649 5811 -310 1986 133 0 17 chr5 76579912 76580213 -126505319 + AluSx SINE Alu 1 296 -16 234 136 0 0 chr5 76580786 76580830 -126504702 + (TC)n Simple_repeat Simple_repeat 1 44 0 1085 220 43 24 chr5 76581902 76582342 -126503190 + MLT1D LTR MaLR 1 505 0 333 0 0 0 chr5 76582346 76582383 -126503149 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 263 0 0 chr5 76582574 76582650 -126502882 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 1985 125 52 30 chr5 76582872 76583239 -126502293 + THE1C LTR MaLR 1 375 0 449 256 16 8 chr5 76583756 76583877 -126501655 - MER45A DNA AcHobo 0 178 57 236 277 0 60 chr5 76584032 76584115 -126501417 - MIR3 SINE MIR -17 191 114 23 0 0 0 chr5 76584504 76584527 -126501005 + AT_rich Low_complexity Low_complexity 1 23 0 2688 258 80 33 chr5 76584993 76585118 -126500414 + L1MDa LINE L1 1027 1145 -5395 2220 119 6 3 chr5 76585118 76585429 -126500103 + AluSx SINE Alu 1 312 0 2688 258 80 33 chr5 76585429 76586577 -126498955 + L1MDa LINE L1 1145 2360 -4180 1219 189 31 22 chr5 76586594 76586821 -126498711 + Tigger3b DNA MER2_type 1 229 -1002 1825 164 30 30 chr5 76586821 76587194 -126498338 + THE1C LTR MaLR 1 373 -2 8622 142 74 19 chr5 76587196 76588693 -126496839 + THE1C-int LTR MaLR 1 1580 0 2074 166 11 21 chr5 76588693 76589072 -126496460 + THE1C LTR MaLR 1 375 0 4660 168 46 20 chr5 76589072 76589189 -126496343 + Tigger3b DNA MER2_type 225 338 -2690 2077 59 0 0 chr5 76589189 76589444 -126496088 + AluY SINE Alu 47 301 -10 4660 168 46 20 chr5 76589444 76590302 -126495230 + Tigger3b DNA MER2_type 338 1225 -6 615 195 110 0 chr5 76590313 76590513 -126495019 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 76590570 76590593 -126494939 + AT_rich Low_complexity Low_complexity 1 23 0 2178 96 0 7 chr5 76590710 76591057 -126494475 - AluY SINE Alu 0 311 1 261 0 0 0 chr5 76591215 76591244 -126494288 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1454 132 93 89 chr5 76591246 76591526 -126494006 - AluSx SINE Alu -31 281 1 205 301 128 23 chr5 76591967 76592100 -126493432 + MIR SINE MIR 13 159 -103 2654 207 68 57 chr5 76592709 76593469 -126492063 + MER4E LTR ERV1 1 769 -10 203 373 85 34 chr5 76595057 76595234 -126490298 - MIR SINE MIR -17 245 60 29 70 0 0 chr5 76595257 76595314 -126490218 + AT_rich Low_complexity Low_complexity 1 57 0 481 311 167 49 chr5 76595778 76596292 -126489240 + L1MEd LINE L1 523 1097 -5022 28 0 0 0 chr5 76596697 76596725 -126488807 + AT_rich Low_complexity Low_complexity 1 28 0 6306 175 11 14 chr5 76596898 76597914 -126487618 - L1PA14 LINE L1 0 6161 5143 2096 122 35 27 chr5 76597914 76598283 -126487249 + THE1C LTR MaLR 1 372 -3 6306 175 11 14 chr5 76598283 76599341 -126486191 - L1PA14 LINE L1 -1018 5143 4088 2887 195 20 16 chr5 76599341 76599612 -126485920 + L1P LINE L1 2121 2390 -3756 2217 90 0 39 chr5 76599612 76599924 -126485608 + AluSc SINE Alu 1 300 -9 2887 195 20 16 chr5 76599924 76600262 -126485270 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 76600678 76600712 -126484820 + (CA)n Simple_repeat Simple_repeat 2 35 0 325 288 42 0 chr5 76600769 76600887 -126484645 - L1ME2 LINE L1 -16 6148 6026 923 249 47 22 chr5 76600893 76601255 -126484277 - L1MEc LINE L1 -3373 3271 2901 326 293 50 46 chr5 76601284 76601447 -126484085 - L1MEc LINE L1 -3959 2866 2700 1422 209 33 50 chr5 76601447 76601844 -126483688 + MLT1B LTR MaLR 1 390 0 326 293 50 46 chr5 76601844 76601939 -126483593 - L1MEc LINE L1 -4125 2700 2607 311 340 53 19 chr5 76602079 76602397 -126483135 - L1MEc LINE L1 -4905 1637 1309 311 298 18 18 chr5 76602467 76602581 -126482951 - L1MEc LINE L1 -5477 1348 1235 206 93 0 23 chr5 76603068 76603111 -126482421 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 681 225 0 12 chr5 76603113 76603273 -126482259 - L1PA16 LINE L1 -10 6156 5999 438 141 26 0 chr5 76603278 76603356 -126482176 + L1P LINE L1 5141 5220 -926 29 0 0 0 chr5 76604536 76604565 -126480967 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 76605569 76605590 -126479942 + AT_rich Low_complexity Low_complexity 1 21 0 234 191 0 0 chr5 76606115 76606162 -126479370 + T-rich Low_complexity Low_complexity 1 47 0 851 224 128 0 chr5 76606269 76606465 -126479067 - MER58A DNA MER1_type -3 221 1 353 259 56 19 chr5 76606472 76606580 -126478952 + L2 LINE L2 3188 3299 -14 341 303 97 32 chr5 76608209 76608394 -126477138 - MIR SINE MIR -13 249 53 452 314 77 72 chr5 76608499 76608733 -126476799 + MLT1F-int LTR MaLR 961 1199 -172 2767 100 2 10 chr5 76608733 76609142 -126476390 + L1PA10 LINE L1 5763 6168 0 452 314 77 72 chr5 76609142 76609308 -126476224 + MLT1F-int LTR MaLR 1199 1363 -8 532 248 165 54 chr5 76609317 76609756 -126475776 + MLT1F LTR MaLR 2 567 0 1464 269 37 11 chr5 76609758 76610223 -126475309 + L1MC4 LINE L1 7355 7831 -211 2124 145 0 0 chr5 76610544 76610855 -126474677 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr5 76612863 76612884 -126472648 + AT_rich Low_complexity Low_complexity 1 21 0 1271 186 28 68 chr5 76612886 76613208 -126472324 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 76614299 76614322 -126471210 + AT_rich Low_complexity Low_complexity 1 23 0 204 200 0 0 chr5 76615369 76615414 -126470118 + GA-rich Low_complexity Low_complexity 2 46 0 231 213 52 26 chr5 76616443 76616598 -126468934 + (TA)n Simple_repeat Simple_repeat 2 160 0 25 0 0 0 chr5 76616860 76616885 -126468647 + AT_rich Low_complexity Low_complexity 1 25 0 2040 132 0 3 chr5 76618151 76618447 -126467085 - AluSq SINE Alu -18 295 1 2374 96 0 0 chr5 76618576 76618879 -126466653 - AluSg SINE Alu -7 303 1 1452 147 0 4 chr5 76618950 76619181 -126466351 - AluJb SINE Alu -12 300 71 26 0 0 0 chr5 76619570 76619596 -126465936 + AT_rich Low_complexity Low_complexity 1 26 0 334 227 0 13 chr5 76620081 76620156 -126465376 - MLT1K LTR MaLR -28 560 487 399 41 0 0 chr5 76620419 76620468 -126465064 + (TG)n Simple_repeat Simple_repeat 2 50 0 1861 101 34 98 chr5 76620634 76620741 -126464791 + AluSx SINE Alu 1 113 -199 2447 73 0 25 chr5 76620741 76621055 -126464477 + AluY SINE Alu 1 306 -5 1861 101 34 98 chr5 76621055 76621275 -126464257 + AluSx SINE Alu 113 307 -5 1878 115 61 17 chr5 76621870 76622165 -126463367 - AluY SINE Alu -3 308 1 910 175 62 0 chr5 76622191 76622351 -126463181 - AluJb SINE Alu -6 306 137 271 274 0 16 chr5 76622542 76622604 -126462928 - MLT1J LTR MaLR -311 200 140 672 71 12 0 chr5 76622604 76622688 -126462844 + AluS SINE Alu 2 86 -226 250 202 20 40 chr5 76676188 76676287 -126409245 + (CACAA)n Simple_repeat Simple_repeat 5 101 0 1654 76 5 5 chr5 76678903 76679126 -126406406 - AluSc SINE Alu -86 223 1 855 220 0 0 chr5 76679275 76679434 -126406098 + FRAM SINE Alu 2 160 -6 1910 74 4 0 chr5 76679436 76679679 -126405853 + AluSp SINE Alu 44 287 -26 378 231 93 8 chr5 76679686 76679845 -126405687 + AluSp SINE Alu 1 153 -150 222 128 0 0 chr5 76684138 76684177 -126401355 + (G)n Simple_repeat Simple_repeat 1 39 0 318 204 102 51 chr5 76684690 76684827 -126400705 - L1 LINE L1 -1169 4977 4838 2124 117 3 0 chr5 76685058 76685367 -126400165 + AluSx SINE Alu 1 310 -2 1319 118 212 12 chr5 76685536 76685791 -126399741 + AluSg1 SINE Alu 1 306 -3 2093 97 10 0 chr5 76685845 76686134 -126399398 + AluSx SINE Alu 1 292 -20 560 186 8 39 chr5 76686444 76686573 -126398959 + FLAM_C SINE Alu 2 126 -17 1947 114 0 27 chr5 76686599 76686922 -126398610 + AluSx SINE Alu 3 312 0 2166 88 3 3 chr5 76686976 76687271 -126398261 + AluSg SINE Alu 1 295 -15 992 152 30 40 chr5 76687281 76687479 -126398053 + AluJb SINE Alu 84 279 -33 2175 105 0 0 chr5 76687479 76687774 -126397758 + AluSx SINE Alu 3 297 -15 887 188 61 20 chr5 76687790 76687987 -126397545 - L1ME3 LINE L1 -13 6149 5945 1306 121 26 4 chr5 76687996 76688227 -126397305 - AluY SINE Alu -8 303 68 1613 101 4 4 chr5 76688459 76688686 -126396846 - AluSx SINE Alu -85 227 1 760 168 0 0 chr5 76688850 76688969 -126396563 + FLAM_A SINE Alu 11 129 -13 597 171 19 0 chr5 76689395 76689500 -126396032 - U6 snRNA snRNA 0 107 1 236 333 22 0 chr5 76689771 76689861 -126395671 + MIR SINE MIR 60 151 -111 269 294 147 64 chr5 76690810 76691028 -126394504 - MIR SINE MIR -8 254 19 490 108 0 0 chr5 76691032 76691097 -126394435 - AluJ/FRAM SINE Alu -27 285 221 459 97 66 33 chr5 76691478 76692114 -126393418 + (TA)n Simple_repeat Simple_repeat 1 656 0 2235 78 3 0 chr5 76692114 76692398 -126393134 - AluSg SINE Alu -25 285 1 687 174 14 42 chr5 76692399 76692543 -126392989 - AluJo SINE Alu -171 141 2 83 29 0 0 chr5 76692619 76692723 -126392809 + AT_rich Low_complexity Low_complexity 1 104 0 931 135 0 0 chr5 76693146 76693279 -126392253 + FLAM_C SINE Alu 1 133 0 1397 103 0 10 chr5 76693350 76693554 -126391978 + AluSq SINE Alu 1 202 -111 258 317 0 35 chr5 76693873 76694015 -126391517 + A-rich Low_complexity Low_complexity 2 138 0 249 33 0 0 chr5 76694280 76694310 -126391222 + (TG)n Simple_repeat Simple_repeat 1 30 0 2274 75 0 35 chr5 76694807 76695126 -126390406 + AluY SINE Alu 1 308 -3 1509 107 26 93 chr5 76695351 76695447 -126390085 - L1M3 LINE L1 -630 5550 5449 2001 104 11 0 chr5 76695447 76695745 -126389787 + AluSx SINE Alu 2 302 0 1509 107 26 93 chr5 76695745 76695884 -126389648 - L1M3 LINE L1 -731 5449 5337 2030 82 20 14 chr5 76695884 76696177 -126389355 - AluY SINE Alu -16 295 1 1509 107 26 93 chr5 76696177 76696249 -126389283 - L1M3 LINE L1 -843 5337 5262 1146 117 10 39 chr5 76696561 76696766 -126388766 + AluSg/x SINE Alu 96 294 -18 318 266 62 105 chr5 76697045 76697286 -126388246 - L1ME3A LINE L1 -207 5963 5713 1997 137 0 0 chr5 76697286 76697579 -126387953 - AluSx SINE Alu -4 308 16 318 266 62 105 chr5 76697579 76697705 -126387827 - L1ME3A LINE L1 -457 5713 5609 2251 67 0 0 chr5 76697705 76698011 -126387521 - AluY SINE Alu 0 306 1 318 266 62 105 chr5 76698011 76698054 -126387478 - L1ME3A LINE L1 -561 5609 5566 513 230 164 24 chr5 76698695 76698860 -126386672 - MER5A DNA MER1_type 0 189 2 2031 124 16 6 chr5 76699300 76699614 -126385918 - MER49 LTR ERV1 -32 891 575 1122 69 7 0 chr5 76699622 76699766 -126385766 + AluSq/x SINE Alu 1 145 -167 756 161 4 128 chr5 76699901 76700041 -126385491 + L1MC3 LINE L1 7574 7673 -112 1653 155 7 48 chr5 76700041 76700351 -126385181 + AluJo SINE Alu 12 308 -4 756 161 4 128 chr5 76700351 76700452 -126385080 + L1MC3 LINE L1 7673 7785 0 358 192 48 48 chr5 76700518 76700622 -126384910 + L1MB8 LINE L1 6075 6178 0 751 191 0 0 chr5 76700938 76701069 -126384463 + FLAM_C SINE Alu 3 133 0 858 147 19 25 chr5 76701427 76701584 -126383948 - FRAM SINE Alu -23 153 1 661 288 93 19 chr5 76701585 76701898 -126383634 + L1MC4a LINE L1 5587 5922 -1886 2034 107 39 0 chr5 76701935 76702216 -126383316 + AluSx SINE Alu 1 292 -20 197 239 75 15 chr5 76702231 76702298 -126383234 - MIR SINE MIR 0 262 192 555 154 0 19 chr5 76702299 76702403 -126383129 + FRAM SINE Alu 75 176 0 2130 87 24 0 chr5 76702480 76702768 -126382764 + AluSg SINE Alu 1 295 -15 1909 136 10 0 chr5 76702813 76703115 -126382417 + AluSx SINE Alu 1 305 -7 1379 178 35 0 chr5 76703125 76703356 -126382176 - MER8 DNA MER2_type 0 239 1 25 0 0 0 chr5 76703393 76703418 -126382114 + AT_rich Low_complexity Low_complexity 1 25 0 2327 62 0 23 chr5 76704235 76704540 -126380992 - AluY SINE Alu -13 298 1 1837 141 3 10 chr5 76704547 76704852 -126380680 - AluSx SINE Alu -9 303 1 21 36 0 0 chr5 76705250 76705278 -126380254 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 76705623 76705644 -126379888 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 76705827 76705864 -126379668 + AT_rich Low_complexity Low_complexity 1 37 0 463 170 0 0 chr5 76706095 76706189 -126379343 - L1MB2 LINE L1 0 6171 6078 1902 131 3 0 chr5 76706208 76706505 -126379027 - AluJo SINE Alu -14 298 1 189 175 100 0 chr5 76706700 76706740 -126378792 + MIR SINE MIR 170 213 -49 2249 84 3 0 chr5 76706986 76707282 -126378250 + AluSq SINE Alu 5 301 -12 1633 178 27 0 chr5 76707345 76707638 -126377894 - AluJo SINE Alu -11 301 1 2057 206 97 138 chr5 76707685 76708586 -126376946 - HAL1 LINE L1 -191 2316 1347 650 229 0 0 chr5 76708586 76708717 -126376815 - FLAM_C SINE Alu -11 132 2 2057 206 97 138 chr5 76708717 76708972 -126376560 - HAL1 LINE L1 -1160 1347 1083 400 283 141 32 chr5 76708970 76709322 -126376210 + L1MC/D LINE L1 5388 5788 -333 * 542 75 0 0 chr5 76709396 76709463 -126376069 + AluSp/q SINE Alu 225 291 -22 895 134 29 2 chr5 76709469 76709628 -126375904 + L1M3 LINE L1 5660 5831 -337 823 212 0 7 chr5 76709641 76709792 -126375740 + AluJb SINE Alu 141 290 -22 533 274 0 7 chr5 76709799 76709945 -126375587 - AluJb SINE Alu -30 282 138 1364 159 0 37 chr5 76710165 76710410 -126375122 - AluJo SINE Alu -76 236 1 380 178 0 0 chr5 76710413 76710486 -126375046 - L1MB2 LINE L1 -2374 5434 5362 1701 141 30 14 chr5 76710487 76710784 -126374748 + AluJb SINE Alu 1 302 -10 382 244 23 23 chr5 76710901 76710987 -126374545 + L2 LINE L2 3228 3313 0 1620 64 0 0 chr5 76711546 76711788 -126373744 + AluY SINE Alu 81 322 0 26 30 0 0 chr5 76711904 76711937 -126373595 + AT_rich Low_complexity Low_complexity 1 33 0 1834 166 3 7 chr5 76711943 76712250 -126373282 + AluJb SINE Alu 1 306 -6 1555 135 3 52 chr5 76712353 76712536 -126372996 - AluJb SINE Alu -6 306 141 2174 86 0 16 chr5 76712536 76712839 -126372693 - AluY SINE Alu -13 298 1 1555 135 3 52 chr5 76712839 76712943 -126372589 - AluJb SINE Alu -171 141 33 188 128 0 43 chr5 76712986 76713033 -126372499 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 325 81 32 32 chr5 76713720 76713782 -126371750 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 1884 135 0 43 chr5 76713784 76714110 -126371422 - AluSx SINE Alu 0 312 1 23 0 0 0 chr5 76714863 76714886 -126370646 + AT_rich Low_complexity Low_complexity 1 23 0 1843 122 0 17 chr5 76714892 76715179 -126370353 - AluSx SINE Alu -30 282 1 361 244 0 0 chr5 76715184 76715262 -126370270 + MIR SINE MIR 48 125 -137 802 172 0 63 chr5 76715265 76715439 -126370093 - FRAM SINE Alu -3 163 1 2263 97 0 0 chr5 76715450 76715758 -126369774 - AluSg SINE Alu -2 308 1 1563 163 22 56 chr5 76716170 76716362 -126369170 - AluJb SINE Alu 0 312 134 2052 129 0 0 chr5 76716362 76716656 -126368876 - AluSx SINE Alu -18 294 1 767 163 0 0 chr5 76716660 76716783 -126368749 - FLAM_C SINE Alu -17 126 4 1936 131 44 10 chr5 76717499 76717796 -126367736 - AluSc SINE Alu -1 308 2 2310 78 7 7 chr5 76717808 76718102 -126367430 - AluY SINE Alu -17 294 1 275 240 193 20 chr5 76718340 76718490 -126367042 - LTR33 LTR ERVL -4 517 342 1899 163 17 0 chr5 76718526 76718820 -126366712 + AluJb SINE Alu 1 299 -13 2293 90 13 7 chr5 76719027 76719337 -126366195 - AluSq SINE Alu -1 312 1 2124 106 31 3 chr5 76719367 76719659 -126365873 - AluSx SINE Alu -12 300 1 765 133 22 0 chr5 76719676 76719811 -126365721 - L1MB7 LINE L1 -19 6165 6028 1086 165 22 0 chr5 76719979 76720161 -126365371 + AluJo SINE Alu 127 312 0 2120 88 19 0 chr5 76720214 76720511 -126365021 - AluSq SINE Alu 0 320 19 1983 152 7 0 chr5 76720540 76720836 -126364696 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr5 76720841 76720868 -126364664 + AT_rich Low_complexity Low_complexity 1 27 0 236 277 107 27 chr5 76721124 76721236 -126364296 - MIR SINE MIR -22 240 120 213 209 0 0 chr5 76721236 76721279 -126364253 + MIR SINE MIR 72 114 -148 1857 138 20 14 chr5 76721871 76722167 -126363365 + AluJb SINE Alu 1 298 -14 806 173 0 15 chr5 76722216 76722349 -126363183 - FLAM_A SINE Alu -2 131 1 436 104 15 0 chr5 76722383 76722450 -126363082 + L1MC1 LINE L1 6266 6333 0 1663 103 0 30 chr5 76722740 76722974 -126362558 - AluSg/x SINE Alu -1 311 85 647 177 43 0 chr5 76723442 76723583 -126361949 + MIR SINE MIR 52 198 -64 2540 73 0 3 chr5 76723895 76724198 -126361334 - AluY SINE Alu -9 302 1 2244 111 3 3 chr5 76724270 76724567 -126360965 - AluSq SINE Alu -15 298 2 234 0 0 0 chr5 76725080 76725106 -126360426 + (A)n Simple_repeat Simple_repeat 1 26 0 1766 193 129 14 chr5 76725485 76725904 -126359628 - MLT1C LTR MaLR 0 467 1 2011 101 6 89 chr5 76725974 76726301 -126359231 - AluSx SINE Alu -12 300 1 25 31 0 0 chr5 76726575 76726607 -126358925 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr5 76726717 76726740 -126358792 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2020 158 0 0 chr5 76726761 76727053 -126358479 - AluSx SINE Alu -20 292 1 2161 122 3 13 chr5 76727096 76727407 -126358125 - AluSx SINE Alu -4 308 1 288 288 110 0 chr5 76727571 76727689 -126357843 + MIR SINE MIR 70 200 -62 1561 157 4 19 chr5 76727863 76728130 -126357402 + AluSx SINE Alu 1 263 -49 21 0 0 0 chr5 76728348 76728369 -126357163 + AT_rich Low_complexity Low_complexity 1 21 0 2097 115 0 7 chr5 76728378 76728688 -126356844 + AluSx SINE Alu 1 308 0 2157 129 0 0 chr5 76728690 76729001 -126356531 + AluY SINE Alu 1 311 0 1746 132 26 11 chr5 76729326 76729598 -126355934 - AluJb SINE Alu -21 291 16 2045 113 0 7 chr5 76730880 76731155 -126354377 + AluSx SINE Alu 21 293 -19 180 0 0 0 chr5 76731155 76731175 -126354357 + (TA)n Simple_repeat Simple_repeat 2 21 0 1786 186 0 13 chr5 76731389 76731696 -126353836 - AluJb SINE Alu -9 303 1 5635 70 76 12 chr5 76731929 76732732 -126352800 + SVA Other Other 5 858 -528 1050 129 41 0 chr5 76732839 76733009 -126352523 - AluSg SINE Alu -133 177 1 360 145 0 0 chr5 76733063 76733125 -126352407 - AluSx SINE Alu -1 301 240 6474 71 12 1 chr5 76733127 76733944 -126351588 + LTR12 LTR ERV1 1 826 0 1668 153 0 0 chr5 76733944 76734185 -126351347 - AluSx SINE Alu -71 241 1 26 30 0 0 chr5 76734191 76734224 -126351308 + AT_rich Low_complexity Low_complexity 1 33 0 454 278 151 45 chr5 76734488 76734840 -126350692 - MLT1K LTR MaLR 0 588 200 2426 84 3 3 chr5 76734938 76735249 -126350283 - AluY SINE Alu 0 311 1 2190 155 15 35 chr5 76735345 76735745 -126349787 - LOR1b LTR ERV1 0 461 70 2269 168 16 18 chr5 76735889 76736246 -126349286 + MSTB LTR MaLR 1 358 -68 2441 94 0 0 chr5 76736246 76736555 -126348977 - AluSq SINE Alu -4 309 1 2269 168 16 18 chr5 76736555 76736584 -126348948 + MSTB LTR MaLR 358 386 -40 1907 126 65 0 chr5 76736916 76737193 -126348339 - AluSq SINE Alu -18 295 1 371 93 37 0 chr5 76737222 76737276 -126348256 + MSTB LTR MaLR 371 426 0 3379 92 0 0 chr5 76737334 76737801 -126347731 + L1PA8 LINE L1 4722 5188 -958 7037 59 4 20 chr5 76737924 76738851 -126346681 + L1PA8 LINE L1 5254 6165 -7 865 97 0 0 chr5 76739101 76739215 -126346317 - FLAM_C SINE Alu -15 118 5 1554 203 17 7 chr5 76739219 76739509 -126346023 - AluJo SINE Alu -19 293 1 2465 79 3 3 chr5 76739642 76739945 -126345587 - AluSp SINE Alu -10 303 1 319 229 89 64 chr5 76739999 76740156 -126345376 + MIR SINE MIR 37 197 -65 2046 165 161 66 chr5 76740159 76740209 -126345323 - LTR49 LTR ERV1 -11 584 540 1599 135 90 0 chr5 76740209 76740454 -126345078 + AluSx SINE Alu 1 267 -45 2046 165 161 66 chr5 76740454 76740936 -126344596 - LTR49 LTR ERV1 -55 540 1 1751 183 0 20 chr5 76741019 76741325 -126344207 - AluJo SINE Alu -12 300 1 245 275 127 48 chr5 76741388 76741577 -126343955 + MLT1I LTR MaLR 5 208 -201 701 187 0 7 chr5 76741591 76741746 -126343786 + (TG)n Simple_repeat Simple_repeat 1 154 0 464 252 41 8 chr5 76741770 76741893 -126343639 + MLT1I LTR MaLR 244 370 -39 264 161 196 0 chr5 76741907 76741963 -126343569 + MLT1I LTR MaLR 335 401 -8 762 148 169 0 chr5 76742132 76742274 -126343258 + AluSg/x SINE Alu 137 302 -10 2308 67 49 0 chr5 76742320 76742605 -126342927 - AluSx SINE Alu -12 300 2 673 193 30 0 chr5 76742802 76742937 -126342595 + FRAM SINE Alu 16 154 -22 484 214 26 51 chr5 76742982 76743099 -126342433 + FLAM_A SINE Alu 12 125 -17 1748 156 35 7 chr5 76743533 76743816 -126341716 - AluJo SINE Alu -21 291 1 26 64 0 0 chr5 76743894 76743941 -126341591 + AT_rich Low_complexity Low_complexity 1 47 0 566 285 63 14 chr5 76744289 76744496 -126341036 + MIR SINE MIR 34 250 -12 2209 95 14 0 chr5 76744559 76744844 -126340688 - AluY SINE Alu -22 289 1 26 64 0 0 chr5 76744846 76744893 -126340639 + AT_rich Low_complexity Low_complexity 1 47 0 221 256 61 0 chr5 76745099 76745181 -126340351 - MIR SINE MIR -32 230 144 625 160 170 0 chr5 76745274 76745380 -126340152 + FLAM_C SINE Alu 2 125 -18 481 261 144 20 chr5 76745461 76745581 -126339951 + MIR SINE MIR 14 118 -144 1598 169 24 10 chr5 76745581 76745871 -126339661 + AluJo SINE Alu 1 294 -18 1961 110 68 4 chr5 76745871 76746152 -126339380 + AluSx SINE Alu 1 299 -13 481 261 144 20 chr5 76746152 76746225 -126339307 + MIR SINE MIR 117 232 -30 1056 179 63 9 chr5 76746257 76746480 -126339052 - MER46A DNA MER2_type 0 236 2 23 33 0 0 chr5 76746681 76746711 -126338821 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 76747918 76747944 -126337588 + AT_rich Low_complexity Low_complexity 1 26 0 826 155 0 61 chr5 76748623 76748771 -126336761 - FLAM_C SINE Alu 0 143 5 629 201 7 56 chr5 76748813 76748957 -126336575 - FLAM_A SINE Alu -5 137 1 1648 167 7 33 chr5 76748960 76749266 -126336266 - AluJb SINE Alu -14 298 1 996 197 78 0 chr5 76749448 76749641 -126335891 - MER3 DNA MER1_type 0 209 2 1644 150 45 21 chr5 76749686 76749973 -126335559 + AluJb SINE Alu 1 294 -18 1622 205 3 3 chr5 76750137 76750444 -126335088 + AluJo SINE Alu 1 307 -5 1006 126 25 0 chr5 76750444 76750603 -126334929 + L1MA3 LINE L1 6143 6305 0 243 241 51 66 chr5 76750616 76750753 -126334779 - L1MC4 LINE L1 -44 7998 7864 381 64 0 0 chr5 76750849 76750896 -126334636 - Alu SINE Alu -253 48 2 181 140 0 40 chr5 76750927 76750977 -126334555 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 281 175 48 0 chr5 76751473 76751536 -126333996 + L1MB7 LINE L1 6114 6179 -5 2287 106 6 3 chr5 76751729 76752041 -126333491 - AluSq SINE Alu 0 313 1 2096 134 10 0 chr5 76752044 76752351 -126333181 - AluSq SINE Alu -3 310 1 874 158 0 0 chr5 76752391 76752524 -126333008 + FLAM_C SINE Alu 1 133 0 256 81 0 0 chr5 76752585 76752622 -126332910 + L1MA8 LINE L1 6021 6057 -234 1318 122 16 63 chr5 76752660 76752745 -126332787 + L1MA8 LINE L1 6043 6130 -161 2360 84 0 0 chr5 76752745 76753043 -126332489 + AluY SINE Alu 1 298 -13 1318 122 16 63 chr5 76753043 76753212 -126332320 + L1MA8 LINE L1 6130 6285 -6 488 203 92 37 chr5 76753906 76754069 -126331463 + MIR SINE MIR 20 191 -71 238 239 0 0 chr5 76754965 76755011 -126330521 + C-rich Low_complexity Low_complexity 1 46 0 211 161 16 16 chr5 76755046 76755108 -126330424 + C-rich Low_complexity Low_complexity 2 63 0 2128 107 14 7 chr5 76755525 76755816 -126329716 + AluSx SINE Alu 17 309 -3 1611 159 64 61 chr5 76755817 76756163 -126329369 - L1MB7 LINE L1 -150 6034 5688 1016 130 74 0 chr5 76756253 76756415 -126329117 + AluSg/x SINE Alu 136 309 -1 405 0 0 0 chr5 76756440 76756485 -126329047 + (CA)n Simple_repeat Simple_repeat 2 46 0 1006 119 126 0 chr5 76756872 76757023 -126328509 + AluSp SINE Alu 1 170 -143 1598 97 14 0 chr5 76757032 76757239 -126328293 + AluSg/x SINE Alu 90 299 -11 1403 93 10 5 chr5 76757239 76757433 -126328099 + AluSp SINE Alu 110 304 -9 2394 83 0 3 chr5 76757433 76757735 -126327797 + AluSg SINE Alu 1 301 -9 568 244 7 7 chr5 76758500 76758635 -126326897 + AluJo SINE Alu 4 138 -174 2241 107 0 3 chr5 76758635 76758933 -126326599 + AluSg SINE Alu 1 297 -13 225 0 0 0 chr5 76758979 76759004 -126326528 + (A)n Simple_repeat Simple_repeat 1 25 0 1017 126 0 50 chr5 76759006 76759165 -126326367 + AluJb SINE Alu 1 151 -161 854 214 62 19 chr5 76759170 76759380 -126326152 + AluJb SINE Alu 71 289 -23 458 263 125 13 chr5 76759394 76759546 -126325986 + MER102a DNA MER1_type 162 330 0 198 204 0 41 chr5 76759748 76759797 -126325735 + L2 LINE L2 3153 3199 -73 207 209 0 0 chr5 76760112 76760155 -126325377 + T-rich Low_complexity Low_complexity 2 44 0 1964 120 10 33 chr5 76760297 76760638 -126324894 - AluSc SINE Alu 0 309 1 2154 126 3 0 chr5 76760775 76761069 -126324463 + AluSx SINE Alu 1 295 -17 397 146 3 0 chr5 76761083 76761153 -126324379 + Alu SINE Alu 2 56 -246 1404 84 21 5 chr5 76761153 76761344 -126324188 + AluSg/x SINE Alu 102 295 -15 2364 78 0 53 chr5 76761829 76762151 -126323381 + AluY SINE Alu 1 305 -6 2342 84 3 10 chr5 76762177 76762473 -126323059 - AluSq SINE Alu -19 294 1 765 186 72 12 chr5 76762591 76762758 -126322774 - L1MC4 LINE L1 -169 7873 7697 724 166 0 43 chr5 76762758 76762897 -126322635 - FLAM_C SINE Alu -9 134 2 1019 164 60 71 chr5 76762897 76763166 -126322366 - L1MC4 LINE L1 -333 7709 7444 1782 146 3 52 chr5 76763397 76763706 -126321826 + AluJb SINE Alu 1 294 -18 1167 133 38 5 chr5 76763968 76764179 -126321353 + L1MA8 LINE L1 5112 5329 -817 1237 142 10 20 chr5 76764181 76764233 -126321299 + AluJb SINE Alu 85 136 -176 2268 111 0 3 chr5 76764233 76764540 -126320992 + AluSq SINE Alu 1 306 -7 1237 142 10 20 chr5 76764540 76764691 -126320841 + AluJb SINE Alu 136 286 -26 1398 144 54 36 chr5 76764691 76764969 -126320563 + L1MA8 LINE L1 5325 5607 -693 986 79 8 0 chr5 76764969 76765095 -126320437 + AluSg SINE Alu 1 127 -183 2386 99 3 0 chr5 76765132 76765435 -126320097 + AluSp SINE Alu 1 304 -9 3306 141 50 62 chr5 76765438 76765507 -126320025 + L1MA8 LINE L1 5600 5668 -623 2136 130 3 3 chr5 76765507 76765807 -126319725 + AluSx SINE Alu 1 300 -12 3306 141 50 62 chr5 76765807 76766251 -126319281 + L1MA8 LINE L1 5668 6105 -186 1870 157 0 20 chr5 76766251 76766550 -126318982 - AluJb SINE Alu -14 298 6 3306 141 50 62 chr5 76766550 76766732 -126318800 + L1MA8 LINE L1 6105 6288 -3 1933 120 0 0 chr5 76766748 76767007 -126318525 - AluSx SINE Alu -10 302 44 4709 193 117 20 chr5 76767161 76767315 -126318217 - L1M4 LINE L1 -4947 1908 1770 1962 125 87 0 chr5 76767315 76767602 -126317930 - AluSx SINE Alu 0 312 1 4709 193 117 20 chr5 76767602 76768257 -126317275 - L1M4 LINE L1 -5085 1770 1180 2217 118 10 3 chr5 76768257 76768561 -126316971 - AluSx SINE Alu -6 306 1 4709 193 117 20 chr5 76768561 76769109 -126316423 - L1M4 LINE L1 -5675 1180 407 974 225 94 40 chr5 76769115 76769391 -126316141 - L1M4 LINE L1 -6558 301 11 4715 158 40 0 chr5 76769419 76770227 -126315305 - L1MB2 LINE L1 -2 6169 5330 284 324 95 7 chr5 76770507 76770655 -126314877 - L3 LINE CR1 -1 1576 1416 360 0 0 0 chr5 76770721 76770761 -126314771 + (TA)n Simple_repeat Simple_repeat 2 41 0 2260 109 0 10 chr5 76770891 76771194 -126314338 + AluSq SINE Alu 1 300 -13 375 281 180 28 chr5 76771660 76771877 -126313655 + MIR SINE MIR 7 256 -6 194 238 0 0 chr5 76772276 76772318 -126313214 + L2 LINE L2 3267 3308 -5 1154 151 0 0 chr5 76772664 76772830 -126312702 + AluJb SINE Alu 117 282 -30 2302 64 0 64 chr5 76773385 76773698 -126311834 + AluSc SINE Alu 1 293 -16 2224 114 3 3 chr5 76773698 76774005 -126311527 + AluSp SINE Alu 1 307 -6 1759 150 36 13 chr5 76774005 76774312 -126311220 - L1MB8 LINE L1 -5 6173 5860 3869 167 68 54 chr5 76774555 76774894 -126310638 - MER21B LTR ERV1 -60 803 470 801 164 0 0 chr5 76774894 76775016 -126310516 + FLAM_A SINE Alu 1 122 -11 3869 167 68 54 chr5 76775016 76775467 -126310065 - MER21B LTR ERV1 -393 470 2 296 238 206 25 chr5 76775634 76775794 -126309738 - L1ME3A LINE L1 -15 6155 5967 2000 143 24 0 chr5 76775865 76776159 -126309373 - AluSq SINE Alu -12 301 1 354 253 199 24 chr5 76776159 76776274 -126309258 - L1ME3A LINE L1 -215 5949 5855 1016 167 74 113 chr5 76776274 76776341 -126309191 - MER33 DNA MER1_type -2262 323 255 2352 98 0 0 chr5 76776341 76776636 -126308896 - AluSq SINE Alu -18 295 1 1016 167 74 113 chr5 76776636 76776792 -126308740 - MER33 DNA MER1_type -2330 255 95 1535 141 0 33 chr5 76776792 76777033 -126308499 - AluSx SINE Alu -39 273 41 1016 167 74 113 chr5 76777033 76777076 -126308456 - MER33 DNA MER1_type -2490 95 52 2441 88 0 0 chr5 76777076 76777371 -126308161 - AluSx SINE Alu -17 295 1 1016 167 74 113 chr5 76777371 76777438 -126308094 - MER33 DNA MER1_type -2533 52 1 354 253 199 24 chr5 76777438 76777488 -126308044 - L1ME3A LINE L1 -309 5855 5755 698 256 63 14 chr5 76777492 76777699 -126307833 + L1ME LINE L1 5552 5768 -402 306 236 0 14 chr5 76777699 76777771 -126307761 + MER5A DNA MER1_type 111 181 -8 236 314 128 10 chr5 76778590 76778692 -126306840 - MER5B DNA MER1_type 0 178 65 3930 162 57 40 chr5 76778692 76779131 -126306401 - L1MB8 LINE L1 -9 6169 5739 2348 81 0 10 chr5 76779131 76779427 -126306105 + AluY SINE Alu 1 293 -18 3930 162 57 40 chr5 76779427 76779807 -126305725 - L1MB8 LINE L1 -439 5739 5333 2296 78 3 33 chr5 76779807 76780113 -126305419 - AluY SINE Alu -14 297 1 3930 162 57 40 chr5 76780113 76780140 -126305392 - L1MB8 LINE L1 -845 5333 5308 1715 144 21 18 chr5 76780141 76780426 -126305106 - AluJb SINE Alu -8 304 19 2939 205 35 34 chr5 76780426 76780474 -126305058 - L1MB8 LINE L1 -945 5201 5155 2418 95 7 0 chr5 76780474 76780779 -126304753 + AluSq SINE Alu 1 307 -6 2939 205 35 34 chr5 76780779 76781495 -126304037 - L1MB8 LINE L1 -991 5155 4436 6899 63 19 36 chr5 76783263 76784229 -126301303 - SVA Other Other -6 1380 432 234 215 17 81 chr5 76784273 76784445 -126301087 + A-rich Low_complexity Low_complexity 3 163 0 2519 70 0 3 chr5 76784745 76785047 -126300485 - AluY SINE Alu -10 301 1 22 35 0 0 chr5 76785149 76785178 -126300354 + AT_rich Low_complexity Low_complexity 1 29 0 624 292 97 40 chr5 76785251 76785498 -126300034 - L1ME3A LINE L1 -424 5697 5417 2098 117 14 3 chr5 76785498 76785789 -126299743 + AluSx SINE Alu 1 294 -18 624 292 97 40 chr5 76785789 76785945 -126299587 - L1ME3A LINE L1 -704 5417 5271 2080 139 13 0 chr5 76785950 76786253 -126299279 + AluSx SINE Alu 1 307 -5 2048 152 0 0 chr5 76786317 76786626 -126298906 - AluSx SINE Alu -3 309 1 21 0 0 0 chr5 76788008 76788029 -126297503 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 76788173 76788195 -126297337 + GC_rich Low_complexity Low_complexity 1 22 0 678 213 25 35 chr5 76789345 76789547 -126295985 + L1MC5 LINE L1 7727 7926 -35 1351 239 73 34 chr5 76789598 76790228 -126295304 + L2 LINE L2 2608 3267 -46 1758 170 0 37 chr5 76790321 76790461 -126295071 + AluJo SINE Alu 1 145 -167 2415 81 14 0 chr5 76790461 76790758 -126294774 + AluY SINE Alu 1 301 -10 1758 170 0 37 chr5 76790758 76790941 -126294591 + AluJo SINE Alu 145 312 0 2176 119 7 7 chr5 76791713 76792023 -126293509 - AluSx SINE Alu 0 312 3 211 127 18 18 chr5 76793969 76794024 -126291508 + (TAA)n Simple_repeat Simple_repeat 3 57 0 886 153 0 0 chr5 76794431 76794562 -126290970 - FLAM_C SINE Alu -2 131 1 416 101 72 0 chr5 76794582 76794651 -126290881 - AluSc SINE Alu 0 309 236 7452 96 13 22 chr5 76794651 76795732 -126289800 + MER11C LTR ERVK 1 1071 0 1866 132 8 0 chr5 76795739 76795996 -126289536 - AluSx SINE Alu -53 259 1 195 42 0 0 chr5 76796040 76796064 -126289468 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1809 172 3 7 chr5 76796068 76796353 -126289179 - AluJb SINE Alu -22 290 7 996 121 0 0 chr5 76796441 76796573 -126288959 - FLAM_C SINE Alu -11 132 1 2111 133 7 0 chr5 76797543 76797843 -126287689 + AluSx SINE Alu 1 302 -10 3096 14 0 0 chr5 76797856 76798202 -126287330 + L1PA2 LINE L1 5804 6149 -6 26 0 0 0 chr5 76798202 76798228 -126287304 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 76798376 76798397 -126287135 + AT_rich Low_complexity Low_complexity 1 21 0 2314 56 13 46 chr5 76798537 76798842 -126286690 - AluY SINE Alu -16 295 1 510 307 0 0 chr5 76798885 76799022 -126286510 + MIR SINE MIR 56 192 -70 25 65 0 0 chr5 76799033 76799079 -126286453 + AT_rich Low_complexity Low_complexity 1 46 0 435 19 0 0 chr5 76799121 76799173 -126286359 + (TTA)n Simple_repeat Simple_repeat 1 52 0 2361 72 0 0 chr5 76799173 76799451 -126286081 - AluSg SINE Alu -32 278 1 1235 156 71 14 chr5 76799565 76799776 -126285756 - AluJo SINE Alu -89 223 1 391 324 9 0 chr5 76799783 76799891 -126285641 + MIR SINE MIR 28 136 -126 24 0 0 0 chr5 76799930 76799954 -126285578 + AT_rich Low_complexity Low_complexity 1 24 0 925 102 0 15 chr5 76800217 76800354 -126285178 - AluSc SINE Alu -1 308 174 2183 114 3 0 chr5 76800651 76800941 -126284591 + AluSx SINE Alu 4 294 -18 28 22 0 22 chr5 76801017 76801038 -126284494 + AT_rich Low_complexity Low_complexity 1 21 -24 2031 116 7 27 chr5 76801038 76801339 -126284193 + AluSx SINE Alu 1 295 -17 28 22 0 22 chr5 76801339 76801363 -126284169 + AT_rich Low_complexity Low_complexity 21 45 0 966 164 0 12 chr5 76802516 76802681 -126282851 + FRAM SINE Alu 1 163 -3 1592 167 3 70 chr5 76802707 76802901 -126282631 - AluJo SINE Alu 0 315 148 1905 131 3 24 chr5 76802901 76803198 -126282334 + AluSx SINE Alu 1 291 -21 1592 167 3 70 chr5 76803198 76803332 -126282200 - AluJo SINE Alu -167 148 7 403 181 162 19 chr5 76803798 76803903 -126281629 + L2 LINE L2 3187 3306 -7 2145 100 7 3 chr5 76804166 76804457 -126281075 - AluSx SINE Alu -16 296 5 258 91 91 0 chr5 76804650 76804694 -126280838 - L1ME3A LINE L1 -14 6156 6109 1990 149 10 0 chr5 76804732 76805028 -126280504 - AluJb SINE Alu -13 299 1 2097 126 17 0 chr5 76805160 76805461 -126280071 + AluSx SINE Alu 1 306 -6 2136 112 3 3 chr5 76805686 76805982 -126279550 + AluSp SINE Alu 12 307 -6 353 229 0 0 chr5 76805982 76806052 -126279480 + L3 LINE CR1 335 404 -1173 247 320 8 40 chr5 76806242 76806367 -126279165 + L3 LINE CR1 674 794 -783 2440 76 0 7 chr5 76806492 76806795 -126278737 + AluSc SINE Alu 1 301 -8 963 187 158 52 chr5 76806911 76807002 -126278530 - MER2 DNA MER2_type 0 344 264 1394 219 29 16 chr5 76807002 76807308 -126278224 + AluJb SINE Alu 1 310 -2 963 187 158 52 chr5 76807308 76807400 -126278132 - MER2 DNA MER2_type -80 264 183 2153 126 3 7 chr5 76807400 76807701 -126277831 + AluSx SINE Alu 3 302 -10 963 187 158 52 chr5 76807701 76807826 -126277706 - MER2 DNA MER2_type -161 183 2 2230 118 0 3 chr5 76807868 76808165 -126277367 - AluSx SINE Alu -16 296 1 2452 8 0 0 chr5 76808234 76808492 -126277040 - AluYa5 SINE Alu -19 292 35 336 288 6 92 chr5 76808648 76808696 -126276836 + L3 LINE CR1 1124 1175 -402 2313 98 17 0 chr5 76808696 76808992 -126276540 + AluSc SINE Alu 1 301 -8 336 288 6 92 chr5 76808992 76809106 -126276426 + L3 LINE CR1 1175 1272 -305 202 250 58 0 chr5 76809278 76809330 -126276202 + L3 LINE CR1 1518 1572 -5 791 159 0 36 chr5 76809671 76809809 -126275723 + FLAM_C SINE Alu 1 133 0 2447 64 7 0 chr5 76809979 76810274 -126275258 + AluY SINE Alu 1 297 -14 239 183 0 50 chr5 76810535 76810595 -126274937 + L2 LINE L2 3008 3064 -249 372 233 203 8 chr5 76810944 76811077 -126274455 + MER5A DNA MER1_type 31 189 0 289 313 26 0 chr5 76811547 76811662 -126273870 + MIR SINE MIR 124 241 -21 2038 104 32 0 chr5 76811891 76812171 -126273361 + AluSx SINE Alu 1 289 -23 189 171 0 0 chr5 76813597 76813632 -126271900 + CT-rich Low_complexity Low_complexity 1 35 0 3251 116 17 12 chr5 76815294 76815811 -126269721 - L1MB7 LINE L1 -15 6169 5650 280 321 36 42 chr5 76816542 76816710 -126268822 + MIR SINE MIR 18 184 -78 399 140 0 0 chr5 76816711 76816768 -126268764 + L1M4 LINE L1 2703 2759 -3387 277 267 40 0 chr5 76816776 76816851 -126268681 + L2 LINE L2 3236 3313 0 1973 150 10 0 chr5 76817427 76817733 -126267799 - AluSx SINE Alu -2 310 2 2419 95 3 0 chr5 76817771 76818077 -126267455 - AluSx SINE Alu -5 307 1 2271 92 3 0 chr5 76818080 76818386 -126267146 - AluSp SINE Alu 0 307 1 527 294 57 6 chr5 76818411 76818588 -126266944 - MIR SINE MIR -74 188 3 327 260 47 39 chr5 76818619 76818746 -126266786 + L1ME3A LINE L1 6039 6166 -4 976 147 13 7 chr5 76818757 76818907 -126266625 - AluJ SINE Alu -44 268 118 2171 100 3 10 chr5 76818928 76819218 -126266314 + AluSx SINE Alu 1 288 -24 21 36 0 0 chr5 76819218 76819246 -126266286 + AT_rich Low_complexity Low_complexity 1 28 0 829 145 0 0 chr5 76819247 76819364 -126266168 - AluJ SINE Alu -195 117 1 2343 98 0 25 chr5 76819969 76820287 -126265245 - AluSx SINE Alu -2 310 1 630 279 56 62 chr5 76820441 76820799 -126264733 - L2 LINE L2 0 3313 2958 1747 139 16 50 chr5 76820924 76821241 -126264291 - AluJo SINE Alu -6 306 1 232 136 15 76 chr5 76821618 76821684 -126263848 + L1ME4a LINE L1 6060 6121 0 2301 119 0 3 chr5 76821687 76821998 -126263534 - AluSx SINE Alu -2 310 1 390 189 107 25 chr5 76822030 76822058 -126263474 - L1MC4 LINE L1 -8 8034 8010 1775 173 10 7 chr5 76822058 76822365 -126263167 + AluJo SINE Alu 1 308 -4 390 189 107 25 chr5 76822365 76822458 -126263074 - L1MC4 LINE L1 -32 8010 7903 24 32 0 0 chr5 76822479 76822510 -126263022 + AT_rich Low_complexity Low_complexity 1 31 0 1089 101 0 0 chr5 76822529 76822668 -126262864 - AluJo SINE Alu -173 139 1 1482 273 74 35 chr5 76822710 76822984 -126262548 - L1MC4 LINE L1 -132 7910 7648 1736 142 0 29 chr5 76822984 76823258 -126262274 - AluSx SINE Alu -12 300 35 1482 273 74 35 chr5 76823258 76823689 -126261843 - L1MC4 LINE L1 -394 7648 7178 2414 59 7 3 chr5 76823766 76824054 -126261478 + AluSc SINE Alu 1 289 -20 1466 169 131 4 chr5 76824257 76824524 -126261008 - AluJo SINE Alu 0 302 2 282 115 211 0 chr5 76824572 76824619 -126260913 + MER1A DNA MER1_type 1 58 -469 2464 151 31 2 chr5 76824619 76825079 -126260453 + MER1A DNA MER1_type 4 528 -1 2308 94 0 7 chr5 76825129 76825437 -126260095 + AluY SINE Alu 1 306 -5 1549 82 77 0 chr5 76825483 76825691 -126259841 - AluSg/x SINE Alu -4 306 83 181 102 51 41 chr5 76826184 76826282 -126259250 + (CACAA)n Simple_repeat Simple_repeat 2 100 0 993 178 170 36 chr5 76826430 76826706 -126258826 - LTR56 LTR ERV1 -113 332 20 2092 94 10 30 chr5 76826740 76827038 -126258494 - AluSc SINE Alu -17 292 1 386 174 81 0 chr5 76827321 76827407 -126258125 + MER5A DNA MER1_type 2 94 -95 2804 104 153 27 chr5 76828651 76828924 -126256608 - Tigger3b DNA MER2_type -1798 1230 993 2047 89 33 4 chr5 76828924 76829194 -126256338 + AluSp SINE Alu 4 281 -32 261 0 0 0 chr5 76829194 76829223 -126256309 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2804 104 153 27 chr5 76829223 76829466 -126256066 - Tigger3b DNA MER2_type -2034 994 648 2262 117 0 0 chr5 76829466 76829765 -126255767 + AluSx SINE Alu 1 299 -13 2417 79 0 13 chr5 76829765 76830080 -126255452 + AluY SINE Alu 1 311 0 429 187 0 33 chr5 76830092 76830183 -126255349 + FLAM_A SINE Alu 2 89 -53 1736 141 0 88 chr5 76830259 76830599 -126254933 - AluJo SINE Alu -2 310 1 409 145 0 0 chr5 76830600 76830662 -126254870 - AluS SINE Alu -220 93 32 241 159 0 29 chr5 76830662 76830728 -126254804 - Tigger3b DNA MER2_type -637 595 532 283 167 0 0 chr5 76830728 76830770 -126254762 + Alu SINE Alu 1 42 -260 517 104 52 0 chr5 76830770 76830847 -126254685 + AluJ/FRAM SINE Alu 216 296 -16 189 0 0 0 chr5 76830850 76830871 -126254661 + (CA)n Simple_repeat Simple_repeat 2 22 0 1810 94 109 52 chr5 76830876 76831206 -126254326 - Tigger3b DNA MER2_type -687 544 196 2336 98 0 7 chr5 76831371 76831677 -126253855 - AluSx SINE Alu -8 304 1 1297 194 7 26 chr5 76831913 76832186 -126253346 - AluJo SINE Alu -7 305 38 707 126 0 0 chr5 76832230 76832333 -126253199 - U13 snRNA snRNA 0 104 2 1943 166 0 0 chr5 76832711 76833012 -126252520 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr5 76833096 76833117 -126252415 + AT_rich Low_complexity Low_complexity 1 21 0 470 285 108 50 chr5 76833136 76833173 -126252359 - L1MC/D LINE L1 -1993 5815 5782 2046 123 26 23 chr5 76833173 76833482 -126252050 - AluSx SINE Alu -2 310 1 470 285 108 50 chr5 76833482 76833704 -126251828 - L1MC/D LINE L1 -2026 5782 5541 689 234 75 54 chr5 76834141 76834419 -126251113 - L1ME3 LINE L1 -16 6146 5863 805 114 0 45 chr5 76834760 76834892 -126250640 + FLAM_C SINE Alu 5 130 -3 296 254 166 55 chr5 76834901 76835082 -126250450 - MLT1K LTR MaLR -47 541 341 180 0 0 0 chr5 76835085 76835105 -126250427 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 942 179 0 0 chr5 76835109 76835260 -126250272 - AluJo/FRAM SINE Alu -24 288 138 2076 148 0 10 chr5 76835261 76835572 -126249960 - AluSx SINE Alu -4 308 1 300 212 280 25 chr5 76835942 76836060 -126249472 + MLT1K LTR MaLR 157 304 -284 485 146 0 24 chr5 76836098 76836180 -126249352 + AluJo SINE Alu 86 165 -147 2112 127 10 0 chr5 76836592 76836884 -126248648 - AluSx SINE Alu -17 295 1 1062 132 0 38 chr5 76838552 76838711 -126246821 + FRAM SINE Alu 1 152 -24 2275 79 10 3 chr5 76838814 76839105 -126246427 - AluSx SINE Alu -19 293 1 2326 97 0 0 chr5 76839557 76839846 -126245686 - AluSx SINE Alu -23 289 1 2391 92 7 0 chr5 76840358 76840664 -126244868 + AluSx SINE Alu 1 308 -4 1479 73 0 0 chr5 76841383 76841562 -126243970 - AluY SINE Alu -13 298 120 2434 71 3 0 chr5 76841959 76842254 -126243278 - AluY SINE Alu -15 296 1 28 29 0 0 chr5 76843880 76843915 -126241617 + AT_rich Low_complexity Low_complexity 1 35 0 1500 118 0 59 chr5 76844066 76844354 -126241178 - AluSx SINE Alu -30 282 12 986 206 61 91 chr5 76844449 76844856 -126240676 - HAL1 LINE L1 -676 1831 1437 2324 89 0 7 chr5 76845317 76845620 -126239912 - AluSx SINE Alu -11 301 1 1840 138 3 43 chr5 76845627 76845931 -126239601 - AluJo SINE Alu -20 292 1 2100 117 16 10 chr5 76846109 76846416 -126239116 + AluSx SINE Alu 1 309 -3 1125 264 61 23 chr5 76846560 76847018 -126238514 - L1ME3A LINE L1 -211 5951 5470 1477 68 34 53 chr5 76847057 76847263 -126238269 - AluSp SINE Alu -2 311 110 2436 74 0 29 chr5 76847279 76847591 -126237941 - AluY SINE Alu -8 303 1 631 122 0 0 chr5 76847607 76847697 -126237835 - AluS SINE Alu -221 91 2 399 41 0 0 chr5 76847864 76847913 -126237619 + (CA)n Simple_repeat Simple_repeat 2 50 0 225 157 14 86 chr5 76848093 76848163 -126237369 + MLT1K LTR MaLR 44 108 -480 328 227 0 13 chr5 76848176 76848251 -126237281 + MLT1K LTR MaLR 487 560 -28 26 0 0 0 chr5 76848736 76848762 -126236770 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr5 76849146 76849166 -126236366 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1566 152 26 26 chr5 76849204 76849474 -126236058 + AluJb SINE Alu 37 306 -6 258 343 10 20 chr5 76849540 76849658 -126235874 + MIR SINE MIR 35 150 -61 1226 104 74 207 chr5 76849658 76849996 -126235536 + 7SLRNA srpRNA srpRNA 1 293 -27 282 234 32 11 chr5 76850138 76850232 -126235300 - MLT1L LTR MaLR -8 607 512 2131 123 3 3 chr5 76850275 76850567 -126234965 + AluSg SINE Alu 1 292 -18 241 261 52 97 chr5 76850723 76850796 -126234736 + MIR SINE MIR 24 90 -172 2213 100 3 13 chr5 76850796 76851096 -126234436 - AluSg SINE Alu -13 297 1 241 261 52 97 chr5 76851096 76851156 -126234376 + MIR SINE MIR 90 151 -111 2022 94 33 11 chr5 76851930 76852234 -126233298 - AluSx SINE Alu 0 310 1 2363 86 3 3 chr5 76852308 76852610 -126232922 - AluY SINE Alu -9 302 1 689 234 75 54 chr5 76853359 76853637 -126231895 - L1ME3 LINE L1 -16 6146 5863 805 114 0 45 chr5 76853978 76854110 -126231422 + FLAM_C SINE Alu 5 130 -3 296 254 166 55 chr5 76854119 76854300 -126231232 - MLT1K LTR MaLR -47 541 341 180 0 0 0 chr5 76854303 76854323 -126231209 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 916 185 0 0 chr5 76854327 76854478 -126231054 - AluJo/FRAM SINE Alu -24 288 138 2111 144 0 10 chr5 76854478 76854790 -126230742 - AluSx SINE Alu -3 309 1 300 212 280 25 chr5 76855160 76855278 -126230254 + MLT1K LTR MaLR 157 304 -284 476 148 0 25 chr5 76855316 76855397 -126230135 + AluJo SINE Alu 86 164 -148 2112 127 10 0 chr5 76855810 76856102 -126229430 - AluSx SINE Alu -17 295 1 1047 138 0 38 chr5 76857770 76857929 -126227603 + FRAM SINE Alu 1 152 -24 2275 79 10 3 chr5 76858032 76858323 -126227209 - AluSx SINE Alu -19 293 1 2355 93 0 0 chr5 76858775 76859064 -126226468 - AluSx SINE Alu -23 289 1 2400 91 7 0 chr5 76859576 76859883 -126225649 + AluSx SINE Alu 1 309 -3 2499 59 0 23 chr5 76860602 76860906 -126224626 - AluY SINE Alu -14 297 1 2055 121 0 7 chr5 76860963 76861252 -126224280 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr5 76861252 76861275 -126224257 + AT_rich Low_complexity Low_complexity 1 23 0 2529 67 0 32 chr5 76861335 76861651 -126223881 + AluY SINE Alu 1 306 -5 301 107 119 107 chr5 76861864 76861948 -126223584 - L1MC3 LINE L1 -526 7259 7175 850 199 44 19 chr5 76861989 76862195 -126223337 - L1MC3 LINE L1 -717 7068 6858 410 285 77 43 chr5 76862345 76862473 -126223059 - L1ME3 LINE L1 -330 5791 5650 2388 99 0 0 chr5 76862473 76862775 -126222757 - AluSx SINE Alu -10 302 1 410 285 77 43 chr5 76862775 76862881 -126222651 - L1ME3 LINE L1 -471 5650 5549 1531 223 129 62 chr5 76863986 76864327 -126221205 - L1ME3A LINE L1 -1 6169 5853 2102 113 25 0 chr5 76864327 76864609 -126220923 - AluSx SINE Alu -23 289 1 1531 223 129 62 chr5 76864609 76864621 -126220911 - L1ME3A LINE L1 -317 5853 5843 2311 104 0 0 chr5 76864621 76864919 -126220613 - AluSx SINE Alu -14 298 1 1531 223 129 62 chr5 76864919 76865219 -126220313 - L1ME3A LINE L1 -327 5843 5472 29 28 0 0 chr5 76865224 76865260 -126220272 + AT_rich Low_complexity Low_complexity 1 36 0 936 199 0 6 chr5 76865261 76865427 -126220105 + FRAM SINE Alu 1 162 -14 254 261 11 11 chr5 76866289 76866377 -126219155 - MIR SINE MIR -56 206 119 2279 106 7 0 chr5 76867224 76867517 -126218015 - AluSg SINE Alu -15 295 1 198 0 0 0 chr5 76867520 76867542 -126217990 + (TG)n Simple_repeat Simple_repeat 2 23 0 2451 75 0 16 chr5 76867543 76867850 -126217682 - AluSp SINE Alu -11 302 1 298 318 142 14 chr5 76868246 76868394 -126217138 + MIR3 SINE MIR 35 201 -7 365 273 117 21 chr5 76868692 76868868 -126216664 - MIR SINE MIR -58 204 22 364 192 71 20 chr5 76869546 76869645 -126215887 + MIR SINE MIR 66 169 -93 292 214 135 22 chr5 76870809 76870898 -126214634 - MIR SINE MIR -117 145 47 527 228 309 0 chr5 76871128 76871400 -126214132 + L2 LINE L2 2307 2662 -652 * 1182 277 119 7 chr5 76871377 76871600 -126213932 + L2 LINE L2 2812 3009 -304 1838 93 45 31 chr5 76871600 76871889 -126213643 - AluSx SINE Alu -19 293 1 1182 277 119 7 chr5 76871889 76872112 -126213420 + L2 LINE L2 3009 3308 -5 2364 65 3 0 chr5 76873047 76873338 -126212194 - AluSc SINE Alu -17 292 1 246 231 115 111 chr5 76873378 76873551 -126211981 - L3 LINE CR1 -26 1551 1375 1985 105 16 30 chr5 76873551 76873856 -126211676 + AluSx SINE Alu 1 301 -11 246 231 115 111 chr5 76873856 76873890 -126211642 - L3 LINE CR1 -202 1375 1343 30 0 0 0 chr5 76873900 76873930 -126211602 + AT_rich Low_complexity Low_complexity 1 30 0 1489 170 65 4 chr5 76873937 76874214 -126211318 - AluJo SINE Alu -17 295 2 2207 113 10 0 chr5 76874317 76874619 -126210913 + AluSq SINE Alu 1 305 -8 430 182 13 0 chr5 76874630 76874707 -126210825 + AluSq/x SINE Alu 53 130 -183 948 109 0 14 chr5 76874707 76874845 -126210687 + AluSg/x SINE Alu 96 231 -81 1859 141 4 0 chr5 76874930 76875206 -126210326 - AluSx SINE Alu -32 280 4 1211 154 193 27 chr5 76875229 76875488 -126210044 - AluSq SINE Alu -1 302 1 1996 129 10 7 chr5 76875491 76875793 -126209739 - AluSx SINE Alu -9 303 1 2877 140 20 41 chr5 76875816 76876081 -126209451 - L1PA16 LINE L1 -3 6163 5894 1906 124 4 14 chr5 76876081 76876356 -126209176 - AluSq SINE Alu -41 272 1 2877 140 20 41 chr5 76876356 76876646 -126208886 - L1PA16 LINE L1 -272 5894 5620 1527 94 0 55 chr5 76876646 76876902 -126208630 + L1PA16 LINE L1 5359 5600 -566 1665 236 28 26 chr5 76877521 76877797 -126207735 - L1MB8 LINE L1 0 6178 5899 1878 137 108 3 chr5 76877797 76878111 -126207421 + MER7A DNA MER2_type 1 345 -1 1665 236 28 26 chr5 76878111 76878363 -126207169 - L1MB8 LINE L1 -279 5899 5649 946 114 0 0 chr5 76879081 76879204 -126206328 + FLAM_C SINE Alu 1 123 -20 23 33 0 0 chr5 76880398 76880428 -126205104 + AT_rich Low_complexity Low_complexity 1 30 0 2216 97 7 7 chr5 76880757 76881066 -126204466 - AluSc SINE Alu 0 309 1 451 251 71 66 chr5 76881682 76881893 -126203639 - MLT1K LTR MaLR -310 278 67 1980 111 54 7 chr5 76881945 76882242 -126203290 - AluSx SINE Alu -1 311 1 493 317 32 21 chr5 76882433 76882619 -126202913 + MIR3 SINE MIR 15 202 -6 26 0 0 0 chr5 76882804 76882830 -126202702 + AT_rich Low_complexity Low_complexity 1 26 0 295 265 78 0 chr5 76883162 76883264 -126202268 - MER104 DNA Tc2 0 180 71 1639 166 4 19 chr5 76883327 76883598 -126201934 + AluJb SINE Alu 1 267 -45 43 20 0 0 chr5 76883598 76883648 -126201884 + AT_rich Low_complexity Low_complexity 1 50 0 1385 244 105 22 chr5 76883655 76883940 -126201592 - HsTC2 DNA Tc2 -1351 547 287 2000 146 0 3 chr5 76883940 76884242 -126201290 - AluSq SINE Alu -12 301 1 1385 244 105 22 chr5 76884242 76884461 -126201071 - HsTC2 DNA Tc2 -1611 287 1 23 0 0 0 chr5 76885021 76885044 -126200488 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 76885081 76885125 -126200407 + AT_rich Low_complexity Low_complexity 1 44 0 269 75 0 0 chr5 76885165 76885205 -126200327 - MADE1 DNA Mariner -35 45 6 233 65 48 48 chr5 76885297 76885359 -126200173 + (TA)n Simple_repeat Simple_repeat 1 62 0 423 0 0 0 chr5 76885415 76885462 -126200070 + (CA)n Simple_repeat Simple_repeat 2 48 0 1772 123 8 4 chr5 76885468 76885720 -126199812 - AluSx SINE Alu -23 289 37 1868 176 83 19 chr5 76886069 76886489 -126199043 + MER44D DNA MER2_type 2 503 -102 9309 124 31 29 chr5 76886489 76887100 -126198432 + Tigger1 DNA MER2_type 2 610 -1808 1616 168 13 52 chr5 76887100 76887409 -126198123 + AluJo SINE Alu 1 297 -15 9309 124 31 29 chr5 76887409 76887693 -126197839 + Tigger1 DNA MER2_type 610 892 -1526 2339 94 0 3 chr5 76887693 76887992 -126197540 + AluSg SINE Alu 1 298 -12 9309 124 31 29 chr5 76887992 76888092 -126197440 + Tigger1 DNA MER2_type 892 990 -1428 1859 141 23 20 chr5 76888092 76888396 -126197136 - AluJo SINE Alu -7 305 1 9309 124 31 29 chr5 76888396 76889011 -126196521 + Tigger1 DNA MER2_type 990 1618 -800 2215 112 3 0 chr5 76889013 76889309 -126196223 + AluSx SINE Alu 1 297 -15 2351 138 50 75 chr5 76889314 76889702 -126195830 + Tigger1 DNA MER2_type 1909 2282 -136 1837 68 141 4 chr5 76889702 76889965 -126195567 - AluY SINE Alu -2 299 1 2351 138 50 75 chr5 76889965 76890099 -126195433 + Tigger1 DNA MER2_type 2282 2418 0 737 119 0 34 chr5 76890088 76890119 -126195413 + MER44D DNA MER2_type 491 522 -1965 * 1881 167 39 0 chr5 76890119 76890449 -126195083 - MER2 DNA MER2_type -1 343 1 737 119 0 34 chr5 76890449 76890535 -126194997 + MER44D DNA MER2_type 522 604 -1 394 282 17 17 chr5 76890689 76890806 -126194726 + L2 LINE L2 3188 3304 -9 25 0 0 0 chr5 76891399 76891424 -126194108 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 76891444 76891466 -126194066 + AT_rich Low_complexity Low_complexity 1 22 0 724 197 8 0 chr5 76891696 76891813 -126193719 + FLAM_C SINE Alu 1 118 -15 204 163 0 23 chr5 76891825 76891868 -126193664 + (TAA)n Simple_repeat Simple_repeat 2 43 0 231 277 69 0 chr5 76892238 76892339 -126193193 - L1ME4a LINE L1 -15 6106 5999 2500 63 0 0 chr5 76892402 76892705 -126192827 + AluY SINE Alu 1 303 -8 25 0 0 0 chr5 76892708 76892733 -126192799 + AT_rich Low_complexity Low_complexity 1 25 0 2061 129 0 7 chr5 76892741 76893056 -126192476 + AluSx SINE Alu 1 313 0 2362 85 0 10 chr5 76893173 76893478 -126192054 - AluSg SINE Alu -8 302 1 21 112 0 0 chr5 76893533 76893631 -126191901 + AT_rich Low_complexity Low_complexity 1 98 0 375 282 92 0 chr5 76893666 76893808 -126191724 + MIR SINE MIR 107 261 -1 32 57 0 0 chr5 76893834 76893887 -126191645 + AT_rich Low_complexity Low_complexity 1 53 0 1106 158 28 0 chr5 76894231 76894408 -126191124 + AluSg/x SINE Alu 122 303 -9 308 197 0 0 chr5 76894799 76894860 -126190672 + L1MC4a LINE L1 5819 5879 -1929 1595 186 65 0 chr5 76895075 76895397 -126190135 - MER7A DNA MER2_type -5 341 1 21 57 0 0 chr5 76895423 76895458 -126190074 + AT_rich Low_complexity Low_complexity 1 35 0 3087 230 48 64 chr5 76895468 76896062 -126189470 + L1MEc LINE L1 19 621 -5775 216 0 0 0 chr5 76896062 76896086 -126189446 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3087 230 48 64 chr5 76896086 76896405 -126189127 + L1MEc LINE L1 621 912 -5484 1929 158 7 0 chr5 76896405 76896703 -126188829 + AluSx SINE Alu 1 300 -12 3087 230 48 64 chr5 76896703 76896946 -126188586 + L1MEc LINE L1 912 1157 -5239 2291 124 0 0 chr5 76896952 76897251 -126188281 + AluSx SINE Alu 1 299 -13 682 183 48 24 chr5 76897328 76897454 -126188078 + FLAM_C SINE Alu 3 131 -12 2090 91 52 3 chr5 76897473 76897760 -126187772 - AluSq SINE Alu -12 301 1 498 171 0 0 chr5 76898900 76898982 -126186550 + MER63 DNA MER1_type 40 747 -315 658 137 0 0 chr5 76899080 76899182 -126186350 + AluJo/FLAM SINE Alu 32 133 -179 2264 109 3 0 chr5 76899182 76899476 -126186056 + AluSp SINE Alu 1 295 -18 2191 90 10 3 chr5 76899636 76899926 -126185606 + AluSq SINE Alu 6 297 -16 370 277 127 29 chr5 76900085 76900433 -126185099 - L1MC/D LINE L1 -346 5775 5388 * 573 229 84 28 chr5 76900431 76900680 -126184852 + HAL1 LINE L1 1083 1345 -1162 651 220 0 0 chr5 76900684 76900816 -126184716 + FLAM_C SINE Alu 1 132 -11 1967 232 115 29 chr5 76900816 76901718 -126183814 + HAL1 LINE L1 1337 2316 -191 1881 150 27 0 chr5 76901764 76902057 -126183475 + AluJo SINE Alu 1 301 -11 2304 104 0 0 chr5 76902154 76902461 -126183071 - AluSq SINE Alu -6 307 1 31 26 0 0 chr5 76902865 76902903 -126182629 + AT_rich Low_complexity Low_complexity 1 38 0 31 26 0 0 chr5 76903223 76903261 -126182271 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr5 76903285 76903318 -126182214 + AT_rich Low_complexity Low_complexity 1 33 0 2080 137 7 0 chr5 76903376 76903675 -126181857 - AluSx SINE Alu -11 301 1 25 0 0 0 chr5 76904608 76904633 -126180899 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 76904764 76904793 -126180739 + AT_rich Low_complexity Low_complexity 1 29 0 2203 79 24 14 chr5 76904898 76905190 -126180342 + AluSx SINE Alu 1 295 -17 2577 50 0 0 chr5 76905931 76906233 -126179299 + AluY SINE Alu 1 302 -9 1827 116 0 0 chr5 76906324 76906583 -126178949 - AluSx SINE Alu -12 300 42 270 0 0 0 chr5 76906704 76906734 -126178798 + (CA)n Simple_repeat Simple_repeat 2 31 0 27 29 0 0 chr5 76907438 76907472 -126178060 + AT_rich Low_complexity Low_complexity 1 34 0 346 138 41 0 chr5 76907498 76907621 -126177911 + (TA)n Simple_repeat Simple_repeat 1 128 0 308 257 61 94 chr5 76907622 76907867 -126177665 - L1MCa LINE L1 -3993 2433 2197 2514 64 0 0 chr5 76907902 76908200 -126177332 - AluY SINE Alu -13 298 1 226 349 75 9 chr5 76909142 76909248 -126176284 - L2 LINE L2 0 3313 3201 350 241 0 37 chr5 76909370 76909478 -126176054 - MER102a DNA MER1_type -13 317 214 1891 186 0 19 chr5 76909662 76909980 -126175552 - AluJb SINE Alu 0 312 1 257 240 115 10 chr5 76909983 76910079 -126175453 - MER102a DNA MER1_type -201 129 24 2150 122 0 10 chr5 76910194 76910505 -126175027 - AluSx SINE Alu -4 308 1 1615 175 35 3 chr5 76910550 76910836 -126174696 - AluJo SINE Alu -17 295 1 724 226 25 75 chr5 76910905 76910983 -126174549 + MER5A DNA MER1_type 1 81 -108 2297 101 0 0 chr5 76910983 76911279 -126174253 + AluSg SINE Alu 1 296 -14 724 226 25 75 chr5 76911279 76911399 -126174133 + MER5A DNA MER1_type 81 189 0 2616 36 0 0 chr5 76911511 76911817 -126173715 + AluY SINE Alu 1 306 -5 2591 35 0 19 chr5 76911850 76912162 -126173370 - AluY SINE Alu -5 306 1 244 255 48 41 chr5 76912219 76912237 -126173295 - L1MA10 LINE L1 -3 6331 6314 1896 211 75 43 chr5 76912237 76912886 -126172646 - L1ME2 LINE L1 -9 6155 5486 1015 224 43 18 chr5 76912907 76913182 -126172350 + L1M4 LINE L1 5055 5341 -805 2453 70 0 7 chr5 76913182 76913481 -126172051 + AluSg SINE Alu 1 297 -13 1015 224 43 18 chr5 76913481 76913531 -126172001 + L1M4 LINE L1 5341 5388 -758 430 310 51 5 chr5 76913688 76913885 -126171647 + L1M4 LINE L1 3966 4171 -1975 2270 101 0 0 chr5 76914481 76914777 -126170755 + AluSc SINE Alu 1 296 -13 530 210 43 29 chr5 76914833 76914971 -126170561 + MIR SINE MIR 99 238 -24 430 191 22 11 chr5 76914979 76915068 -126170464 + MER21B LTR ERV1 1 90 -773 1613 237 73 34 chr5 76915090 76915597 -126169935 + MER21B LTR ERV1 19 545 -318 687 147 47 47 chr5 76915603 76915773 -126169759 + LTR9 LTR ERV1 443 612 0 610 148 41 8 chr5 76915775 76915897 -126169635 + HUERS-P3 LTR ERV1 3 128 -8791 256 163 0 0 chr5 76915909 76915952 -126169580 + HUERS-P3 LTR ERV1 885 927 -6491 * 2823 171 18 13 chr5 76915948 76916496 -126169036 + HUERS-P3 LTR ERV1 142 692 -8227 1285 171 25 8 chr5 76916496 76916741 -126168791 + LTR9 LTR ERV1 284 532 -80 869 233 68 38 chr5 76916756 76917022 -126168510 + MER21B LTR ERV1 532 805 -58 1898 176 3 0 chr5 76917688 76917994 -126167538 + AluJb SINE Alu 1 307 -5 658 276 145 21 chr5 76918132 76918436 -126167096 + HAL1 LINE L1 798 1063 -1444 1745 143 7 18 chr5 76918436 76918716 -126166816 + AluJb SINE Alu 1 277 -35 658 276 145 21 chr5 76918716 76918941 -126166591 + HAL1 LINE L1 1063 1393 -1114 980 196 0 0 chr5 76919045 76919213 -126166319 + FRAM SINE Alu 1 168 -8 213 258 15 15 chr5 76919571 76919637 -126165895 + MIR SINE MIR 2 67 -195 180 250 0 0 chr5 76919674 76919714 -126165818 - MIR3 SINE MIR -9 199 160 607 188 128 0 chr5 76919948 76920065 -126165467 - FLAM_A SINE Alu -1 132 1 1875 141 3 30 chr5 76920443 76920748 -126164784 - AluJb SINE Alu -15 297 1 2070 116 23 10 chr5 76920753 76921055 -126164477 - AluSx SINE Alu -6 306 1 285 367 23 34 chr5 76921801 76921978 -126163554 + HUERS-P3 LTR ERV1 800 974 -3217 946 188 0 33 chr5 76922113 76922294 -126163238 + FRAM SINE Alu 1 175 -1 2177 109 0 7 chr5 76922295 76922580 -126162952 + AluSx SINE Alu 1 283 -29 743 120 0 0 chr5 76922580 76922680 -126162852 - AluJ/FLAM SINE Alu -210 102 3 878 156 31 95 chr5 76922919 76922988 -126162544 + L1MB8 LINE L1 5592 5664 -520 1575 139 65 81 chr5 76922988 76923297 -126162235 + AluJb SINE Alu 1 304 -8 878 156 31 95 chr5 76923297 76923507 -126162025 + L1MB8 LINE L1 5664 5860 -324 1532 161 0 52 chr5 76923562 76923824 -126161708 + L1MB8 LINE L1 5863 6108 -70 1585 162 13 55 chr5 76923824 76924133 -126161399 - AluJo SINE Alu -12 300 5 1532 161 0 52 chr5 76924133 76924180 -126161352 + L1MB8 LINE L1 6108 6156 -22 1955 116 56 11 chr5 76924180 76924464 -126161068 - AluSg SINE Alu -13 297 1 1207 111 0 84 chr5 76924464 76924654 -126160878 - AluSx SINE Alu -135 177 4 1470 191 4 8 chr5 76924790 76925041 -126160491 - AluJo SINE Alu -62 250 1 2287 94 3 3 chr5 76925217 76925515 -126160017 - AluSx SINE Alu -14 298 1 315 167 0 0 chr5 76925728 76925776 -126159756 + AluSp/q SINE Alu 227 274 -29 1878 110 8 0 chr5 76925777 76926032 -126159500 + AluSx SINE Alu 40 296 -16 2555 52 0 7 chr5 76926473 76926779 -126158753 - AluY SINE Alu -7 304 1 459 256 0 26 chr5 76926946 76927063 -126158469 + L2 LINE L2 3200 3313 0 208 349 57 0 chr5 76928333 76928439 -126157093 - MIR SINE MIR -59 149 38 1845 171 7 0 chr5 76928887 76929185 -126156347 - AluSx SINE Alu -12 300 1 1708 156 17 21 chr5 76929438 76929570 -126155962 + AluJb SINE Alu 1 132 -180 2346 76 3 0 chr5 76929570 76929861 -126155671 + AluY SINE Alu 1 292 -19 1708 156 17 21 chr5 76929861 76930016 -126155516 + AluJb SINE Alu 132 287 -25 1827 152 45 3 chr5 76930440 76930729 -126154803 - AluSx SINE Alu -11 301 1 1838 148 0 83 chr5 76930745 76931084 -126154448 - AluJb SINE Alu -1 311 1 676 270 9 28 chr5 76931093 76931304 -126154228 - L1MC5 LINE L1 -451 7510 7304 2081 129 13 3 chr5 76931305 76931614 -126153918 - AluSx SINE Alu 0 312 1 2382 108 0 0 chr5 76931767 76932073 -126153459 + AluSx SINE Alu 1 306 -6 569 127 0 0 chr5 76932074 76932153 -126153379 + AluSx SINE Alu 2 80 -233 201 118 59 0 chr5 76932167 76932218 -126153314 + CT-rich Low_complexity Low_complexity 3 56 0 1578 101 5 0 chr5 76932220 76932427 -126153105 + AluSx SINE Alu 89 296 -16 223 245 31 20 chr5 76932707 76932805 -126152727 + GA-rich Low_complexity Low_complexity 1 99 0 246 296 19 46 chr5 76933022 76933130 -126152402 + MER91C DNA MER1_type 1 105 -35 557 212 0 8 chr5 76933566 76933684 -126151848 + AluJb SINE Alu 1 117 -195 217 139 76 13 chr5 76933691 76933770 -126151762 + GA-rich Low_complexity Low_complexity 2 85 0 2192 133 0 0 chr5 76934819 76935127 -126150405 - AluSx SINE Alu -4 308 1 2409 92 0 0 chr5 76935256 76935559 -126149973 - AluSg SINE Alu -7 303 1 1465 147 0 4 chr5 76935630 76935861 -126149671 - AluJb SINE Alu -12 300 71 26 0 0 0 chr5 76936250 76936276 -126149256 + AT_rich Low_complexity Low_complexity 1 26 0 328 227 0 13 chr5 76936761 76936836 -126148696 - MLT1K LTR MaLR -28 560 487 225 157 14 86 chr5 76936849 76936919 -126148613 - MLT1K LTR MaLR -480 108 44 399 41 0 0 chr5 76937099 76937148 -126148384 + (TG)n Simple_repeat Simple_repeat 2 50 0 1908 92 34 95 chr5 76937314 76937421 -126148111 + AluSx SINE Alu 1 113 -199 2468 73 0 25 chr5 76937421 76937735 -126147797 + AluY SINE Alu 1 306 -5 1908 92 34 95 chr5 76937735 76937954 -126147578 + AluSx SINE Alu 113 307 -5 1892 115 61 17 chr5 76938549 76938844 -126146688 - AluY SINE Alu -3 308 1 922 175 62 0 chr5 76938870 76939030 -126146502 - AluJb SINE Alu -6 306 137 705 201 27 134 chr5 76939221 76939282 -126146250 - MLT1J LTR MaLR -311 200 134 2358 87 0 3 chr5 76939282 76939571 -126145961 + AluSq SINE Alu 1 288 -25 705 201 27 134 chr5 76939571 76939588 -126145944 - MLT1J LTR MaLR -377 134 117 252 0 0 0 chr5 76939588 76939616 -126145916 + (TTA)n Simple_repeat Simple_repeat 1 28 0 705 201 27 134 chr5 76939616 76939760 -126145772 - MLT1J LTR MaLR -394 117 1 348 224 84 9 chr5 76940594 76940701 -126144831 - L2 LINE L2 0 3313 3199 2317 106 0 0 chr5 76940701 76941002 -126144530 - AluSq SINE Alu -12 301 1 495 295 27 42 chr5 76941535 76941796 -126143736 - HAL1 LINE L1 -239 2268 2012 2847 186 19 43 chr5 76941800 76941825 -126143707 - L1MB5 LINE L1 -10 6164 6140 1747 175 7 10 chr5 76941825 76942133 -126143399 - AluJo SINE Alu -4 308 2 2847 186 19 43 chr5 76942133 76942678 -126142854 - L1MB5 LINE L1 -34 6140 5609 2130 114 30 3 chr5 76942678 76942976 -126142556 - AluSx SINE Alu -6 306 1 2847 186 19 43 chr5 76942976 76943050 -126142482 - L1MB5 LINE L1 -565 5609 5535 863 198 10 41 chr5 76943050 76943247 -126142285 - L1MB5 LINE L1 -81 6093 5903 232 156 195 39 chr5 76943238 76943315 -126142217 - L1MB5 LINE L1 -629 5551 5463 * 2411 65 3 26 chr5 76943322 76943631 -126141901 - AluY SINE Alu -9 302 1 27 29 0 0 chr5 76943691 76943725 -126141807 + AT_rich Low_complexity Low_complexity 1 34 0 1176 222 63 107 chr5 76943734 76943835 -126141697 - HAL1 LINE L1 -506 2001 1897 2301 119 0 3 chr5 76943835 76944145 -126141387 - AluSx SINE Alu -3 309 1 1176 222 63 107 chr5 76944145 76944634 -126140898 - HAL1 LINE L1 -610 1897 1437 2324 89 0 7 chr5 76945096 76945399 -126140133 - AluSx SINE Alu -11 301 1 1840 138 3 43 chr5 76945406 76945710 -126139822 - AluJo SINE Alu -20 292 1 2090 121 16 10 chr5 76945888 76946195 -126139337 + AluSx SINE Alu 1 309 -3 1182 273 59 21 chr5 76946339 76946815 -126138717 - L1ME3A LINE L1 -219 5951 5458 2629 65 3 0 chr5 76946843 76947152 -126138380 - AluSp SINE Alu -2 311 2 1595 206 3 3 chr5 76947275 76947567 -126137965 + AluJo SINE Alu 4 295 -17 774 176 0 0 chr5 76947690 76947821 -126137711 - FLAM_C SINE Alu -2 131 1 1696 187 10 3 chr5 76947859 76948164 -126137368 - AluJb SINE Alu -4 308 2 2595 59 0 3 chr5 76948216 76948520 -126137012 - AluY SINE Alu -8 303 1 1836 206 46 90 chr5 76948521 76948866 -126136666 - L1MEc LINE L1 -4072 2649 2290 2019 134 0 7 chr5 76948866 76949157 -126136375 + AluSx SINE Alu 1 289 -23 1836 206 46 90 chr5 76949157 76949448 -126136084 - L1MEc LINE L1 -4431 2290 2046 2342 108 0 0 chr5 76949448 76949753 -126135779 - AluSg SINE Alu -5 305 1 1836 206 46 90 chr5 76949753 76949838 -126135694 - L1MEc LINE L1 -4675 2046 1959 1243 181 181 0 chr5 76950053 76950313 -126135219 + AluSx SINE Alu 1 307 -5 1607 171 47 27 chr5 76950569 76950868 -126134664 - AluJb SINE Alu -6 306 2 2235 109 0 0 chr5 76950884 76951204 -126134328 - AluSq SINE Alu 0 320 1 2015 141 0 20 chr5 76951207 76951511 -126134021 - AluSx SINE Alu -10 302 5 857 160 55 38 chr5 76951526 76951763 -126133769 - L1MD3 LINE L1 0 7995 7755 728 172 0 37 chr5 76952032 76952194 -126133338 + FLAM_C SINE Alu 1 157 0 275 356 77 0 chr5 76952438 76952542 -126132990 - L2 LINE L2 -8 3264 3153 1994 149 0 0 chr5 76953656 76953976 -126131556 - AluJb SINE Alu 0 320 1 25 0 0 0 chr5 76956570 76956595 -126128937 + AT_rich Low_complexity Low_complexity 1 25 0 321 204 114 42 chr5 76956742 76956909 -126128623 - L1 LINE L1 -1631 4515 4337 415 243 66 7 chr5 76956911 76957063 -126128469 - L1MEc LINE L1 -4826 1714 1554 * 3481 157 92 69 chr5 76957056 76957206 -126128326 - L1MB4 LINE L1 -2 6178 6033 2281 98 3 3 chr5 76957206 76957513 -126128019 + AluSx SINE Alu 1 307 -5 3481 157 92 69 chr5 76957513 76958054 -126127478 - L1MB4 LINE L1 -147 6033 5506 2091 142 0 0 chr5 76958054 76958350 -126127182 - AluSx SINE Alu -16 296 1 1813 156 3 50 chr5 76958352 76958574 -126126958 - AluJo SINE Alu -7 305 101 2480 84 0 0 chr5 76958574 76958883 -126126649 - AluSx SINE Alu -1 311 3 1813 156 3 50 chr5 76958883 76958980 -126126552 - AluJo SINE Alu -211 101 1 3481 157 92 69 chr5 76958980 76959555 -126125977 - L1MB4 LINE L1 -674 5506 4886 2422 93 0 16 chr5 76959555 76959867 -126125665 - AluSg SINE Alu -3 307 1 562 257 40 107 chr5 76960439 76960541 -126124991 - MIR SINE MIR -15 247 140 2459 57 14 0 chr5 76960541 76960838 -126124694 - AluY SINE Alu -10 301 1 562 257 40 107 chr5 76960838 76960988 -126124544 - MIR SINE MIR -122 140 12 2059 117 4 7 chr5 76960993 76961274 -126124258 + AluSq SINE Alu 1 280 -33 276 96 58 0 chr5 76961290 76961342 -126124190 + AluSp/q SINE Alu 248 302 -1 1926 146 20 10 chr5 76961685 76961986 -126123546 + AluJo SINE Alu 1 304 -8 192 234 0 0 chr5 76961986 76962033 -126123499 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 2310 104 0 10 chr5 76962113 76962421 -126123111 - AluSx SINE Alu -7 305 1 2298 106 0 3 chr5 76962437 76962749 -126122783 - AluSx SINE Alu -1 311 1 337 383 54 0 chr5 76962787 76962954 -126122578 - MIR3 SINE MIR -6 202 27 1649 171 33 23 chr5 76963315 76963620 -126121912 + AluJo SINE Alu 1 308 -4 1447 223 76 34 chr5 76964617 76964657 -126120875 + L1MC4 LINE L1 6449 6486 -1556 2238 118 0 3 chr5 76964657 76964962 -126120570 + AluSx SINE Alu 1 304 -8 1447 223 76 34 chr5 76964962 76965357 -126120175 + L1MC4 LINE L1 6486 6902 -1140 286 129 43 57 chr5 76966282 76966352 -126119180 - L1ME3A LINE L1 -7 6163 6095 1930 105 4 0 chr5 76966353 76966610 -126118922 - AluSq SINE Alu 0 313 56 2585 65 0 0 chr5 76966932 76967239 -126118293 + AluY SINE Alu 1 307 -4 341 188 0 29 chr5 76967469 76967538 -126117994 + L2 LINE L2 3205 3271 -1 1687 168 31 24 chr5 76967949 76968241 -126117291 + AluJo SINE Alu 1 294 -18 2301 118 0 3 chr5 76968527 76968840 -126116692 - AluSx SINE Alu 0 312 1 623 136 0 182 chr5 76969076 76969171 -126116361 + FLAM_A SINE Alu 1 59 -243 2670 58 0 0 chr5 76969171 76969481 -126116051 + AluY SINE Alu 1 310 -1 623 136 0 182 chr5 76969481 76969539 -126115993 + FLAM_A SINE Alu 59 126 -176 21 0 0 0 chr5 76970124 76970145 -126115387 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr5 76970177 76970198 -126115334 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2161 119 0 13 chr5 76971007 76971309 -126114223 + AluSx SINE Alu 1 298 -14 541 121 36 121 chr5 76971341 76971481 -126114051 + L1MA9 LINE L1 6185 6312 0 990 242 158 83 chr5 76971767 76971840 -126113692 - LTR41 LTR ERVL -3 770 704 2117 90 3 60 chr5 76971840 76972162 -126113370 + AluSx SINE Alu 1 305 0 2304 149 8 0 chr5 76972165 76972527 -126113005 - MER47A DNA MER2_type -1 365 1 990 242 158 83 chr5 76972527 76973159 -126112373 - LTR41 LTR ERVL -70 703 7 2418 92 3 0 chr5 76973428 76973732 -126111800 + AluSp SINE Alu 1 305 -8 258 146 0 0 chr5 76973819 76973860 -126111672 + MER58 DNA MER1_type 54 94 -247 298 136 85 0 chr5 76973861 76973920 -126111612 + MER58 DNA MER1_type 2341 2404 -16 243 274 126 15 chr5 76973954 76974089 -126111443 + L2 LINE L2 101 250 -3064 1813 144 99 31 chr5 76974123 76974476 -126111056 - MSTA LTR MaLR -51 377 1 9123 166 35 10 chr5 76974476 76975945 -126109587 - MSTA-int LTR MaLR 0 1651 137 2418 85 3 7 chr5 76975945 76976251 -126109281 + AluSx SINE Alu 2 306 -6 9123 166 35 10 chr5 76976251 76976392 -126109140 - MSTA-int LTR MaLR -1514 137 1 1479 116 23 9 chr5 76976392 76976608 -126108924 - MSTA LTR MaLR 0 428 210 281 254 159 0 chr5 76976613 76976739 -126108793 + L2 LINE L2 210 355 -2959 1792 230 122 131 chr5 76976934 76977410 -126108122 + L2 LINE L2 1771 2250 -1064 847 156 0 7 chr5 76977410 76977545 -126107987 - AluJo SINE Alu -178 134 1 1792 230 122 131 chr5 76977545 76978151 -126107381 + L2 LINE L2 2250 2976 -338 2441 151 48 87 chr5 76978162 76978485 -126107047 + Looper DNA T2_type 870 1157 -401 585 203 49 8 chr5 76978485 76978608 -126106924 + FLAM_A SINE Alu 3 130 -3 2441 151 48 87 chr5 76978608 76978925 -126106607 + Looper DNA T2_type 1157 1485 -73 2625 225 27 39 chr5 76978931 76979133 -126106399 + MER82 DNA MER2_type 1 204 -449 2053 142 0 3 chr5 76979133 76979422 -126106110 + AluSx SINE Alu 1 288 -24 2625 225 27 39 chr5 76979422 76979880 -126105652 + MER82 DNA MER2_type 204 653 0 395 274 201 46 chr5 76979899 76980190 -126105342 + L1MC/D LINE L1 5273 5518 -2290 2415 84 0 7 chr5 76980190 76980488 -126105044 + AluSg SINE Alu 1 296 -14 395 274 201 46 chr5 76980488 76980674 -126104858 + L1MC/D LINE L1 5518 5824 -1984 23 0 0 0 chr5 76980677 76980700 -126104832 + AT_rich Low_complexity Low_complexity 1 23 0 5317 28 0 3 chr5 76980712 76981320 -126104212 - L1PA3 LINE L1 -3 6152 5547 23364 22 4 0 chr5 76981320 76984177 -126101355 + L1PA3 LINE L1 2655 5524 -631 227 160 80 0 chr5 76984175 76984225 -126101307 + L1MC/D LINE L1 5816 5869 -1939 * 2076 114 14 20 chr5 76984336 76984633 -126100899 - AluSx SINE Alu -17 295 1 787 146 31 15 chr5 76984724 76984854 -126100678 + FLAM_C SINE Alu 1 132 -1 1863 159 0 10 chr5 76984904 76985200 -126100332 - AluJb SINE Alu -19 293 1 2472 86 0 0 chr5 76985222 76985526 -126100006 - AluSx SINE Alu -8 304 1 2079 118 14 10 chr5 76985626 76985922 -126099610 + AluSx SINE Alu 1 297 -15 2086 139 0 0 chr5 76986640 76986943 -126098589 + AluSx SINE Alu 1 303 -9 413 268 134 84 chr5 76987101 76987702 -126097830 - L1MC4 LINE L1 0 8042 7311 1585 155 0 74 chr5 76988376 76988522 -126097010 + AluJb SINE Alu 9 122 -190 2206 121 0 6 chr5 76988522 76988835 -126096697 + AluSx SINE Alu 1 311 -1 1585 155 0 74 chr5 76988835 76988997 -126096535 + AluJb SINE Alu 122 294 -18 26 21 0 42 chr5 76988997 76989024 -126096508 + AT_rich Low_complexity Low_complexity 1 27 -19 1962 115 7 36 chr5 76989024 76989158 -126096374 + AluSp SINE Alu 2 138 -175 2400 87 0 3 chr5 76989158 76989469 -126096063 + AluY SINE Alu 1 310 -1 1962 115 7 36 chr5 76989469 76989639 -126095893 + AluSp SINE Alu 138 297 -16 26 21 0 42 chr5 76989639 76989659 -126095873 + AT_rich Low_complexity Low_complexity 27 46 0 2338 93 7 0 chr5 76989659 76989960 -126095572 - AluSp SINE Alu -10 303 1 2386 64 14 10 chr5 76990014 76990309 -126095223 - AluSp SINE Alu -17 296 1 21 0 0 0 chr5 76990398 76990419 -126095113 + AT_rich Low_complexity Low_complexity 1 21 0 2281 98 7 3 chr5 76990798 76991103 -126094429 + AluY SINE Alu 1 306 -5 493 282 81 18 chr5 76991103 76991376 -126094156 + L1PB4 LINE L1 5649 5938 -218 * 2224 149 96 31 chr5 76991135 76991525 -126094007 + L1MB8 LINE L1 5691 6117 -61 2409 82 0 10 chr5 76991525 76991831 -126093701 - AluY SINE Alu -8 303 1 2224 149 96 31 chr5 76991831 76991897 -126093635 + L1MB8 LINE L1 6117 6177 -1 21 82 0 0 chr5 76991915 76991964 -126093568 + AT_rich Low_complexity Low_complexity 1 49 0 1800 145 19 4 chr5 76992128 76992397 -126093135 - AluSx SINE Alu -39 273 1 2000 144 3 17 chr5 76992397 76992696 -126092836 - AluSx SINE Alu -17 295 1 2308 26 44 7 chr5 76992867 76993172 -126092360 + AluY SINE Alu 1 315 0 2035 100 0 4 chr5 76993316 76993585 -126091947 + AluY SINE Alu 39 306 -5 26 30 0 0 chr5 76993795 76993828 -126091704 + AT_rich Low_complexity Low_complexity 1 33 0 851 138 0 65 chr5 76994152 76994290 -126091242 - FLAM_C SINE Alu -4 129 1 261 0 0 0 chr5 76994495 76994524 -126091008 + (CA)n Simple_repeat Simple_repeat 2 30 0 2232 117 10 0 chr5 76994670 76994979 -126090553 + AluSq SINE Alu 1 312 -1 219 69 0 0 chr5 76995388 76995417 -126090115 + (TGG)n Simple_repeat Simple_repeat 2 30 0 2164 101 4 0 chr5 76996024 76996301 -126089231 + AluSx SINE Alu 20 297 -15 2316 75 0 4 chr5 76996617 76996928 -126088604 - AluY SINE Alu 0 311 2 395 336 53 16 chr5 76997846 76998089 -126087443 + MIR SINE MIR 3 256 -6 2239 107 3 3 chr5 76999099 76999399 -126086133 - AluSg SINE Alu -10 300 1 195 110 0 82 chr5 76999528 76999601 -126085931 + (CAACT)n Simple_repeat Simple_repeat 2 68 0 1926 172 0 0 chr5 76999792 77000089 -126085443 + AluJo SINE Alu 1 297 -15 2182 107 25 0 chr5 77000672 77000953 -126084579 - AluSx SINE Alu -24 288 1 21 36 0 0 chr5 77000956 77000984 -126084548 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 77001702 77001728 -126083804 + AT_rich Low_complexity Low_complexity 1 26 0 320 194 10 29 chr5 77001763 77001866 -126083666 + CT-rich Low_complexity Low_complexity 4 104 0 1237 181 5 23 chr5 77001868 77002089 -126083443 - AluJo SINE Alu -93 219 3 913 201 0 0 chr5 77002101 77002270 -126083262 + FRAM SINE Alu 2 170 -6 26 0 0 0 chr5 77002270 77002296 -126083236 + AT_rich Low_complexity Low_complexity 1 26 0 2210 82 0 0 chr5 77002533 77002846 -126082686 + AluSg SINE Alu 16 328 0 1661 169 19 41 chr5 77002855 77002987 -126082545 + AluJb SINE Alu 1 134 -178 2244 107 3 0 chr5 77002987 77003287 -126082245 + AluSg SINE Alu 1 301 -9 1661 169 19 41 chr5 77003287 77003473 -126082059 + AluJb SINE Alu 134 312 0 1019 221 42 2 chr5 77003556 77003648 -126081884 + L1MB2 LINE L1 5879 5966 -205 2265 74 27 7 chr5 77003648 77003944 -126081588 + AluSp SINE Alu 1 302 -11 1019 221 42 2 chr5 77003944 77004107 -126081425 + L1MB2 LINE L1 5966 6139 -32 183 42 0 0 chr5 77004310 77004334 -126081198 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2039 127 0 3 chr5 77004337 77004620 -126080912 - AluSx SINE Alu -28 284 3 1283 145 9 33 chr5 77004716 77004930 -126080602 + AluJb SINE Alu 85 293 -19 202 204 93 0 chr5 77004949 77005003 -126080529 - MIR SINE MIR -120 142 84 1949 122 20 31 chr5 77005123 77005417 -126080115 + AluSx SINE Alu 1 291 -21 329 292 121 17 chr5 77005970 77006167 -126079365 + HAL1b LINE L1 466 694 -654 2478 81 3 3 chr5 77006167 77006476 -126079056 + AluSq SINE Alu 1 309 -4 329 292 121 17 chr5 77006476 77006518 -126079014 + HAL1b LINE L1 694 730 -618 1100 225 89 26 chr5 77006533 77006624 -126078908 + L1MD2 LINE L1 4625 4709 -1437 3996 92 38 36 chr5 77006624 77007233 -126078299 - MER4B LTR ERV1 0 610 1 1100 225 89 26 chr5 77007233 77007568 -126077964 + L1MD2 LINE L1 4709 5078 -1068 2123 214 97 83 chr5 77007589 77008351 -126077181 - LTR19C LTR ERV1 0 779 7 1317 201 34 31 chr5 77008365 77008569 -126076963 + L1MD2 LINE L1 5122 5324 -842 1715 186 16 7 chr5 77008569 77008876 -126076656 + AluJo SINE Alu 1 310 -2 1317 201 34 31 chr5 77008876 77009103 -126076429 + L1MD2 LINE L1 5324 5554 -612 356 229 12 0 chr5 77009104 77009187 -126076345 + MER57A LTR ERV1 295 378 -25 466 253 107 20 chr5 77009189 77009339 -126076193 + L1MD2 LINE L1 5549 5711 -453 496 152 11 22 chr5 77009340 77009432 -126076100 - AluJb SINE Alu -176 136 46 583 248 93 23 chr5 77009438 77009735 -126075797 + L1MD2 LINE L1 5680 5821 -343 559 214 40 35 chr5 77009869 77010042 -126075490 + MLT1F LTR MaLR 354 527 -15 628 224 78 106 chr5 77010135 77010384 -126075148 + L2 LINE L2 225 465 -2849 2465 55 0 16 chr5 77010384 77010694 -126074838 + AluY SINE Alu 6 310 -1 628 224 78 106 chr5 77010694 77010765 -126074767 + L2 LINE L2 465 536 -2778 956 164 16 55 chr5 77010772 77010955 -126074577 + AluJb SINE Alu 127 302 -10 2448 247 122 45 chr5 77010955 77011177 -126074355 + L2 LINE L2 539 742 -2572 2076 144 108 10 chr5 77011177 77011567 -126073965 + MSTA LTR MaLR 1 428 0 2448 247 122 45 chr5 77011567 77011767 -126073765 + L2 LINE L2 742 925 -2389 1472 152 18 94 chr5 77011767 77012097 -126073435 - AluJb SINE Alu -7 305 1 2282 116 6 0 chr5 77012100 77012411 -126073121 - AluSq SINE Alu 0 313 1 2448 247 122 45 chr5 77012411 77012462 -126073070 + L2 LINE L2 926 972 -2342 2243 115 0 7 chr5 77012462 77012766 -126072766 - AluSx SINE Alu -10 302 1 2448 247 122 45 chr5 77012766 77013361 -126072171 + L2 LINE L2 972 1696 -1618 700 164 7 36 chr5 77013362 77013502 -126072030 + FRAM SINE Alu 6 141 -35 218 211 28 14 chr5 77013530 77013601 -126071931 + L2 LINE L2 1706 1777 -1537 619 203 72 0 chr5 77013602 77013740 -126071792 + FRAM SINE Alu 7 154 -22 2494 35 0 7 chr5 77013780 77014101 -126071431 - AluY SINE Alu 0 311 1 1010 157 86 10 chr5 77014102 77014300 -126071232 - AluJb SINE Alu -17 295 83 433 237 272 39 chr5 77014369 77014652 -126070880 + L2 LINE L2 2343 2691 -623 1566 123 8 4 chr5 77015207 77015443 -126070089 - AluJb SINE Alu -2 310 74 360 0 0 0 chr5 77015444 77015484 -126070048 + (TG)n Simple_repeat Simple_repeat 2 41 0 1811 136 20 10 chr5 77015649 77015943 -126069589 - AluJb SINE Alu -15 297 1 2400 88 0 0 chr5 77015950 77016245 -126069287 - AluSg SINE Alu -15 295 1 405 127 164 60 chr5 77016428 77016528 -126069004 + L1MA9 LINE L1 6161 6280 -32 2215 116 0 0 chr5 77016528 77016821 -126068711 + AluSx SINE Alu 1 293 -19 405 127 164 60 chr5 77016821 77016854 -126068678 + L1MA9 LINE L1 6280 6308 -4 21 0 0 0 chr5 77016864 77016885 -126068647 + AT_rich Low_complexity Low_complexity 1 21 0 442 104 0 0 chr5 77016940 77017007 -126068525 + Alu SINE Alu 244 310 -2 21 36 0 0 chr5 77017113 77017141 -126068391 + AT_rich Low_complexity Low_complexity 1 28 0 2276 83 37 7 chr5 77017149 77017449 -126068083 - AluSg SINE Alu -1 309 1 652 165 0 94 chr5 77017466 77017636 -126067896 - L1MB7 LINE L1 -17 6167 6014 400 194 97 19 chr5 77017636 77017739 -126067793 - AluJo SINE Alu -147 155 45 1954 131 40 0 chr5 77017987 77018284 -126067248 + AluSx SINE Alu 2 310 -2 1425 191 86 7 chr5 77018285 77018563 -126066969 + AluJb SINE Alu 1 300 -12 251 196 78 20 chr5 77018624 77018726 -126066806 + L1MC/D LINE L1 5341 5448 -2360 2230 121 7 0 chr5 77018728 77019033 -126066499 + AluSx SINE Alu 1 307 -5 905 130 0 0 chr5 77019080 77019211 -126066321 + FLAM_C SINE Alu 3 133 0 25 0 0 0 chr5 77019211 77019236 -126066296 + AT_rich Low_complexity Low_complexity 1 25 0 795 172 0 15 chr5 77019414 77019548 -126065984 + FLAM_C SINE Alu 2 133 0 2198 99 3 16 chr5 77019570 77019874 -126065658 + AluSx SINE Alu 2 301 -11 2125 188 24 26 chr5 77019911 77020240 -126065292 + MER65C LTR ERV1 1 330 -131 2330 97 7 0 chr5 77020240 77020539 -126064993 - AluSp SINE Alu -12 301 1 2125 188 24 26 chr5 77020539 77020671 -126064861 + MER65C LTR ERV1 330 461 0 367 253 39 19 chr5 77020680 77020848 -126064684 + L1MC/D LINE L1 5622 5792 -329 1178 156 0 0 chr5 77020888 77021067 -126064465 - AluSg/x SINE Alu -11 299 121 2336 85 0 0 chr5 77021113 77021427 -126064105 + AluY SINE Alu 1 314 0 1009 119 0 7 chr5 77022111 77022254 -126063278 - AluJb SINE Alu -170 142 1 2248 80 0 7 chr5 77022289 77022589 -126062943 + AluSg SINE Alu 1 298 -12 1166 139 0 0 chr5 77022589 77022754 -126062778 + AluSc SINE Alu 132 296 -13 1049 241 92 28 chr5 77022800 77023236 -126062296 + MLT1C LTR MaLR 1 467 0 1458 226 50 77 chr5 77023407 77023968 -126061564 + L1ME3A LINE L1 5415 5960 -210 1046 148 35 6 chr5 77024322 77024491 -126061041 - AluSg/x SINE Alu -16 296 123 1112 53 0 0 chr5 77024499 77024631 -126060901 + AluSq/x SINE Alu 1 132 -181 2177 113 14 0 chr5 77024633 77024924 -126060608 + AluSx SINE Alu 1 295 -17 2917 82 0 3 chr5 77025045 77025421 -126060111 + THE1C LTR MaLR 1 375 0 1591 73 51 13 chr5 77025825 77026031 -126059501 + MER75B DNA T2_type 1 219 -285 2491 62 0 28 chr5 77026031 77026351 -126059181 - AluY SINE Alu 0 311 1 1591 73 51 13 chr5 77026351 77026378 -126059154 + MER75B DNA T2_type 219 243 0 2298 100 3 19 chr5 77026697 77027006 -126058526 - AluSx SINE Alu -8 304 1 2204 96 4 0 chr5 77027009 77027290 -126058242 - AluSg SINE Alu -8 302 21 1847 176 0 0 chr5 77027310 77027594 -126057938 - AluJb SINE Alu -28 284 1 369 0 0 0 chr5 77028015 77028056 -126057476 + (GA)n Simple_repeat Simple_repeat 1 41 0 339 25 0 0 chr5 77028055 77028095 -126057437 + (TG)n Simple_repeat Simple_repeat 2 41 0 * 1841 168 0 3 chr5 77028056 77028381 -126057151 - AluJb SINE Alu -27 285 1 619 157 19 9 chr5 77028530 77028638 -126056894 + AluSq SINE Alu 45 153 -160 * 620 125 0 0 chr5 77028630 77028718 -126056814 + AluSg/x SINE Alu 206 293 -16 2201 75 36 0 chr5 77029014 77029321 -126056211 + AluSp SINE Alu 1 317 0 2241 115 0 19 chr5 77029341 77029653 -126055879 + AluSx SINE Alu 5 310 -2 21 0 0 0 chr5 77029923 77029944 -126055588 + AT_rich Low_complexity Low_complexity 1 21 0 1935 118 13 30 chr5 77029966 77030270 -126055262 + AluJb SINE Alu 1 299 -13 2150 112 0 0 chr5 77030723 77031019 -126054513 + AluSx SINE Alu 1 296 -16 2053 108 6 60 chr5 77031541 77031855 -126053677 - AluSx SINE Alu -15 297 1 2177 107 14 0 chr5 77032920 77033210 -126052322 - AluSg SINE Alu -16 294 1 2176 117 0 10 chr5 77033423 77033731 -126051801 - AluSx SINE Alu -7 305 1 254 105 0 0 chr5 77033734 77033772 -126051760 - L1M4 LINE L1 -571 5603 5566 2140 101 7 0 chr5 77033841 77034140 -126051392 + AluSp SINE Alu 10 310 0 375 123 15 0 chr5 77034172 77034237 -126051295 + MER41A LTR ERV1 400 465 -89 299 338 106 0 chr5 77034310 77034461 -126051071 + MIR SINE MIR 53 219 -43 1813 183 0 7 chr5 77034637 77034937 -126050595 + AluJb SINE Alu 1 298 -14 281 135 19 39 chr5 77034983 77035035 -126050497 + MER5B DNA MER1_type 1 51 -127 1272 67 0 0 chr5 77035057 77035221 -126050311 + L1PA6 LINE L1 5991 6154 0 2174 115 3 0 chr5 77035250 77035546 -126049986 + AluSx SINE Alu 1 297 -15 219 185 261 15 chr5 77035558 77035623 -126049909 + MER5B DNA MER1_type 22 102 -76 398 118 15 0 chr5 77035625 77035693 -126049839 + L1MA4 LINE L1 6168 6236 -64 2163 57 50 0 chr5 77035698 77035977 -126049555 - AluY SINE Alu -18 293 1 1988 107 3 42 chr5 77035977 77036119 -126049413 - AluSp SINE Alu -35 278 151 2430 44 3 0 chr5 77036119 77036412 -126049120 - AluY SINE Alu -17 294 1 1988 107 3 42 chr5 77036412 77036558 -126048974 - AluSp SINE Alu -162 151 1 1044 123 0 0 chr5 77036560 77036706 -126048826 - AluSg/x SINE Alu -7 303 158 328 107 0 67 chr5 77036715 77036790 -126048742 + L1MA4 LINE L1 6231 6300 0 359 218 58 11 chr5 77036790 77036877 -126048655 + MER5B DNA MER1_type 87 177 -1 225 274 167 0 chr5 77037214 77037298 -126048234 + L2 LINE L2 3211 3308 -5 1957 130 7 7 chr5 77037299 77037611 -126047921 - AluSx SINE Alu 0 312 1 1763 184 13 7 chr5 77037803 77038112 -126047420 - AluJo SINE Alu -1 311 1 188 260 60 0 chr5 77038724 77038774 -126046758 - MIR SINE MIR -78 184 132 213 258 50 8 chr5 77040407 77040527 -126045005 + (TA)n Simple_repeat Simple_repeat 1 125 0 2000 146 0 22 chr5 77040657 77040973 -126044559 - AluSx SINE Alu -3 309 1 2023 145 19 29 chr5 77041466 77041845 -126043687 + THE1C LTR MaLR 1 375 0 435 301 79 30 chr5 77042045 77042248 -126043284 - MIR SINE MIR -45 217 5 21 95 0 0 chr5 77042797 77042860 -126042672 + AT_rich Low_complexity Low_complexity 1 63 0 25 0 0 0 chr5 77042956 77042981 -126042551 + AT_rich Low_complexity Low_complexity 1 25 0 350 89 0 18 chr5 77044901 77044957 -126040575 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 1703 132 0 0 chr5 77044968 77045203 -126040329 - AluSq SINE Alu -78 235 1 28 48 0 0 chr5 77045234 77045276 -126040256 + AT_rich Low_complexity Low_complexity 1 42 0 642 331 92 11 chr5 77045400 77045769 -126039763 - LTR16B LTR ERVL -30 434 36 436 274 51 23 chr5 77046104 77046319 -126039213 + L1MEd LINE L1 561 781 -5338 2352 96 3 0 chr5 77046373 77046676 -126038856 + AluSx SINE Alu 1 304 -8 197 228 53 35 chr5 77046822 77046879 -126038653 - L2 LINE L2 -69 3244 3187 1269 134 21 21 chr5 77047438 77047677 -126037855 - L1MA8 LINE L1 -3 6288 6050 21 0 0 0 chr5 77047878 77047899 -126037633 + AT_rich Low_complexity Low_complexity 1 21 0 378 311 89 21 chr5 77048039 77048274 -126037258 - MIR SINE MIR 0 262 12 196 107 0 0 chr5 77048318 77048346 -126037186 - L2 LINE L2 -2769 545 518 682 191 0 30 chr5 77048589 77048720 -126036812 + FLAM_C SINE Alu 1 127 -16 275 294 129 22 chr5 77048723 77048995 -126036537 - L2 LINE L2 -1152 2162 1862 329 274 75 27 chr5 77049129 77049275 -126036257 - L2 LINE L2 0 3313 3161 2402 156 17 57 chr5 77049406 77049566 -126035966 + L1PB4 LINE L1 5631 5796 -360 2132 124 0 7 chr5 77049566 77049872 -126035660 + AluSx SINE Alu 1 304 -8 2402 156 17 57 chr5 77049872 77050236 -126035296 + L1PB4 LINE L1 5796 6134 -22 401 248 162 10 chr5 77050286 77050536 -126034996 - L2 LINE L2 -283 3030 2749 23 0 0 0 chr5 77051717 77051740 -126033792 + AT_rich Low_complexity Low_complexity 1 23 0 1298 124 38 0 chr5 77053191 77053400 -126032132 + L1PA15 LINE L1 5942 6158 -7 198 255 0 0 chr5 77053871 77053922 -126031610 + MIR SINE MIR 91 141 -121 756 184 0 27 chr5 77054642 77054789 -126030743 + FLAM_C SINE Alu 1 143 0 248 253 343 6 chr5 77054946 77055112 -126030420 - MIR SINE MIR -40 222 1 21 0 0 0 chr5 77056544 77056565 -126028967 + AT_rich Low_complexity Low_complexity 1 21 0 224 361 21 10 chr5 77057693 77057790 -126027742 + MIR SINE MIR 38 135 -73 574 344 16 6 chr5 77058309 77058492 -126027040 + MIR3 SINE MIR 20 204 -4 186 43 0 0 chr5 77058767 77058790 -126026742 + (A)n Simple_repeat Simple_repeat 1 23 0 2743 114 127 55 chr5 77059659 77060201 -126025331 - LTR12 LTR ERV1 -133 581 1 1235 245 88 30 chr5 77061044 77061525 -126024007 - MLT1E2 LTR MaLR 0 626 137 1584 160 65 49 chr5 77061725 77062094 -126023438 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 77062392 77062415 -126023117 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 77062518 77062539 -126022993 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 77062946 77062974 -126022558 + AT_rich Low_complexity Low_complexity 1 28 0 431 135 53 0 chr5 77063331 77063464 -126022068 + (TA)n Simple_repeat Simple_repeat 2 141 0 540 275 43 33 chr5 77064071 77064282 -126021250 + MIR SINE MIR 34 246 -16 352 319 25 19 chr5 77064443 77064600 -126020932 - MIR SINE MIR -88 174 17 239 302 0 0 chr5 77065781 77065844 -126019688 + CT-rich Low_complexity Low_complexity 3 65 0 2120 112 14 0 chr5 77066412 77066708 -126018824 - AluSx SINE Alu -11 301 2 214 306 10 0 chr5 77067746 77067844 -126017688 + A-rich Low_complexity Low_complexity 4 102 0 249 327 126 5 chr5 77069983 77070182 -126015350 + L1MC4 LINE L1 7793 8015 -27 233 333 85 33 chr5 77070771 77070924 -126014608 + HAL1 LINE L1 767 927 -1580 225 348 14 22 chr5 77071261 77071399 -126014133 + HAL1 LINE L1 1251 1387 -1120 377 284 64 26 chr5 77071635 77071899 -126013633 + HAL1 LINE L1 1536 1809 -698 398 201 0 7 chr5 77072327 77072481 -126013051 + (TA)n Simple_repeat Simple_repeat 2 154 0 1461 248 82 24 chr5 77072484 77072935 -126012597 - MLT2B1 LTR ERVL -41 479 3 1509 173 58 18 chr5 77072968 77073245 -126012287 + AluJb SINE Alu 11 298 -14 398 68 0 17 chr5 77074730 77074789 -126010743 + (TA)n Simple_repeat Simple_repeat 2 59 0 237 231 19 0 chr5 77075838 77075890 -126009642 + (CA)n Simple_repeat Simple_repeat 2 54 0 214 296 0 17 chr5 77076027 77076142 -126009390 + (TA)n Simple_repeat Simple_repeat 1 113 0 2078 122 0 3 chr5 77076169 77076465 -126009067 + AluSq SINE Alu 1 295 -18 25 0 0 0 chr5 77077719 77077744 -126007788 + AT_rich Low_complexity Low_complexity 1 25 0 219 204 59 26 chr5 77078006 77078158 -126007374 + (TA)n Simple_repeat Simple_repeat 1 157 0 204 200 0 0 chr5 77079139 77079184 -126006348 + CT-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr5 77080231 77080254 -126005278 + AT_rich Low_complexity Low_complexity 1 23 0 1277 188 28 74 chr5 77081345 77081669 -126003863 - AluJo SINE Alu -3 309 1 21 0 0 0 chr5 77081671 77081692 -126003840 + AT_rich Low_complexity Low_complexity 1 21 0 2054 155 0 0 chr5 77083701 77084005 -126001527 - AluSx SINE Alu -8 304 1 1388 273 37 11 chr5 77084326 77084791 -126000741 - L1MC4 LINE L1 -211 7831 7355 534 243 165 54 chr5 77084793 77085232 -126000300 - MLT1F LTR MaLR 0 567 2 443 318 72 70 chr5 77085240 77085408 -126000124 - MLT1F-int LTR MaLR -7 1364 1198 2805 98 2 10 chr5 77085408 77085817 -125999715 - L1PA10 LINE L1 0 6168 5763 443 318 72 70 chr5 77085817 77086051 -125999481 - MLT1F-int LTR MaLR -173 1198 961 336 303 97 32 chr5 77086156 77086341 -125999191 + MIR SINE MIR 53 249 -13 340 235 50 67 chr5 77087959 77088078 -125997454 - L2 LINE L2 -9 3304 3188 856 224 128 0 chr5 77088085 77088281 -125997251 + MER58A DNA MER1_type 1 221 -3 225 191 0 0 chr5 77088388 77088435 -125997097 + A-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 77088960 77088981 -125996551 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 77089985 77090014 -125995518 + AT_rich Low_complexity Low_complexity 1 29 0 436 141 26 0 chr5 77091194 77091272 -125994260 - L1P LINE L1 -926 5220 5141 689 225 0 12 chr5 77091277 77091437 -125994095 + L1PA16 LINE L1 5999 6156 -10 239 70 0 23 chr5 77091439 77091482 -125994050 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 310 298 18 18 chr5 77091969 77092083 -125993449 + L1MEc LINE L1 1235 1348 -5477 276 340 53 19 chr5 77092153 77092471 -125993061 + L1MEc LINE L1 1309 1637 -4905 302 270 62 58 chr5 77092611 77092706 -125992826 + L1MEc LINE L1 2607 2700 -4125 1427 209 33 50 chr5 77092706 77093103 -125992429 - MLT1B LTR MaLR 0 390 1 302 270 62 58 chr5 77093103 77093266 -125992266 + L1MEc LINE L1 2700 2866 -3959 876 238 50 25 chr5 77093295 77093657 -125991875 + L1MEc LINE L1 2901 3271 -3373 303 297 42 0 chr5 77093663 77093781 -125991751 + L1ME2 LINE L1 6026 6148 -16 243 88 0 0 chr5 77093838 77093872 -125991660 + (TG)n Simple_repeat Simple_repeat 2 35 0 2893 193 20 16 chr5 77094288 77094626 -125990906 - L1P LINE L1 -3414 2732 2390 2248 90 0 39 chr5 77094626 77094938 -125990594 - AluSc SINE Alu -9 300 1 2893 193 20 16 chr5 77094938 77095209 -125990323 - L1P LINE L1 -3756 2390 2121 6339 175 27 19 chr5 77095209 77096268 -125989264 + L1PA14 LINE L1 4088 5154 -1007 2113 122 35 27 chr5 77096268 77096637 -125988895 - THE1C LTR MaLR -3 372 1 6339 175 27 19 chr5 77096637 77097653 -125987879 + L1PA14 LINE L1 5154 6161 0 28 0 0 0 chr5 77097826 77097854 -125987678 + AT_rich Low_complexity Low_complexity 1 28 0 577 312 162 41 chr5 77098259 77098772 -125986760 - L1MEd LINE L1 -5022 1097 523 29 70 0 0 chr5 77099236 77099293 -125986239 + AT_rich Low_complexity Low_complexity 1 57 0 193 373 85 34 chr5 77099316 77099493 -125986039 + MIR SINE MIR 60 245 -17 2658 207 69 54 chr5 77101083 77101841 -125983691 - MER4E LTR ERV1 -10 769 1 204 316 120 15 chr5 77102450 77102583 -125982949 - MIR SINE MIR -103 159 13 1510 125 93 89 chr5 77103024 77103331 -125982201 + AluSx SINE Alu 1 308 0 2182 88 0 7 chr5 77103489 77103800 -125981732 + AluY SINE Alu 1 309 0 23 0 0 0 chr5 77103928 77103951 -125981581 + AT_rich Low_complexity Low_complexity 1 23 0 645 191 62 5 chr5 77104008 77104218 -125981314 - L1MDa LINE L1 -3934 2606 2385 4725 166 43 20 chr5 77104229 77105090 -125980442 - Tigger3b DNA MER2_type -1803 1225 338 2154 55 0 0 chr5 77105090 77105345 -125980187 - AluY SINE Alu -10 301 47 4725 166 43 20 chr5 77105345 77105462 -125980070 - Tigger3b DNA MER2_type -2690 338 225 2036 174 11 21 chr5 77105462 77105841 -125979691 - THE1C LTR MaLR 0 375 1 2181 125 29 24 chr5 77105841 77106217 -125979315 - THE1C-int LTR MaLR 0 1580 1203 462 291 27 42 chr5 77106838 77107099 -125978433 - HAL1 LINE L1 -239 2268 2012 2738 183 18 48 chr5 77107103 77107128 -125978404 - L1MB5 LINE L1 -10 6164 6140 1734 175 7 13 chr5 77107128 77107437 -125978095 - AluJo SINE Alu -4 308 2 2738 183 18 48 chr5 77107437 77107982 -125977550 - L1MB5 LINE L1 -34 6140 5613 2089 114 30 3 chr5 77107982 77108279 -125977253 - AluSx SINE Alu -7 305 1 2738 183 18 48 chr5 77108279 77108359 -125977173 - L1MB5 LINE L1 -561 5613 5532 745 203 10 47 chr5 77108359 77108551 -125976981 - L1MB5 LINE L1 -87 6087 5903 227 182 195 39 chr5 77108542 77108619 -125976913 - L1MB5 LINE L1 -629 5551 5463 * 2367 65 3 26 chr5 77108626 77108935 -125976597 - AluY SINE Alu -9 302 1 27 29 0 0 chr5 77108995 77109029 -125976503 + AT_rich Low_complexity Low_complexity 1 34 0 238 286 33 0 chr5 77109038 77109129 -125976403 - HAL1 LINE L1 -506 2001 1908 2269 117 0 0 chr5 77109139 77109446 -125976086 - AluSx SINE Alu -3 309 3 1269 145 9 33 chr5 77109542 77109756 -125975776 + AluJb SINE Alu 85 293 -19 224 204 93 0 chr5 77109775 77109829 -125975703 - MIR SINE MIR -120 142 84 1915 122 20 31 chr5 77109949 77110243 -125975289 + AluSx SINE Alu 1 291 -21 335 270 104 0 chr5 77110796 77110959 -125974573 + HAL1b LINE L1 466 645 -703 2430 81 3 3 chr5 77110993 77111302 -125974230 + AluSq SINE Alu 1 309 -4 1068 225 89 26 chr5 77111359 77111450 -125974082 + L1ME LINE L1 4625 4709 -1437 3913 92 38 36 chr5 77111450 77112059 -125973473 - MER4B LTR ERV1 0 610 1 1068 225 89 26 chr5 77112059 77112394 -125973138 + L1ME LINE L1 4709 5078 -1068 2047 210 98 84 chr5 77112415 77113177 -125972355 - LTR19C LTR ERV1 0 779 7 1083 202 38 35 chr5 77113191 77113395 -125972137 + L1ME LINE L1 5122 5324 -842 1691 186 16 7 chr5 77113395 77113702 -125971830 + AluJo SINE Alu 1 310 -2 1083 202 38 35 chr5 77113702 77113907 -125971625 + L1ME LINE L1 5324 5532 -634 1985 157 3 0 chr5 77114440 77114740 -125970792 + AluSx SINE Alu 1 301 -11 346 285 17 23 chr5 77116437 77116609 -125968923 + L1PB1 LINE L1 5935 6105 -46 365 335 0 7 chr5 77116857 77117009 -125968523 + AluYa5 SINE Alu 131 281 -20 269 185 15 15 chr5 77118389 77118454 -125967078 - MER3 DNA MER1_type 0 209 145 875 153 8 115 chr5 77119308 77119543 -125965989 + MER2 DNA MER2_type 1 210 -135 204 354 0 0 chr5 77122361 77122522 -125963010 + T-rich Low_complexity Low_complexity 1 161 0 316 283 58 22 chr5 77122869 77123007 -125962525 - L1MEc LINE L1 -4709 1687 1545 22 0 0 0 chr5 77124157 77124179 -125961353 + AT_rich Low_complexity Low_complexity 1 22 0 38 39 0 0 chr5 77124258 77124310 -125961222 + AT_rich Low_complexity Low_complexity 1 52 0 29 78 0 0 chr5 77124414 77124478 -125961054 + AT_rich Low_complexity Low_complexity 1 64 0 24 85 0 0 chr5 77125141 77125200 -125960332 + AT_rich Low_complexity Low_complexity 1 59 0 287 248 56 35 chr5 77125277 77125475 -125960057 + L1M4 LINE L1 3816 4017 -2129 445 220 114 35 chr5 77125667 77125750 -125959782 - LTR37B LTR ERV1 -3 465 390 1228 230 39 70 chr5 77125750 77126232 -125959300 + MLT1C LTR MaLR 1 467 0 445 220 114 35 chr5 77126232 77126375 -125959157 - LTR37B LTR ERV1 -78 390 221 267 289 19 0 chr5 77126379 77126483 -125959049 - L1MA10 LINE L1 -4 6330 6225 * 282 266 73 34 chr5 77126476 77126653 -125958879 - L1ME2 LINE L1 -125 6039 5856 987 272 91 42 chr5 77127136 77127594 -125957938 - L1ME2 LINE L1 -1150 4996 4562 2496 141 24 12 chr5 77127594 77128013 -125957519 - MSTA LTR MaLR 0 428 5 987 272 91 42 chr5 77128013 77128643 -125956889 - L1ME2 LINE L1 -1584 4562 3855 23 0 0 0 chr5 77128875 77128898 -125956634 + AT_rich Low_complexity Low_complexity 1 23 0 1904 161 10 3 chr5 77129442 77129752 -125955780 - AluSx SINE Alu 0 312 1 189 0 0 0 chr5 77130048 77130069 -125955463 + (TG)n Simple_repeat Simple_repeat 2 22 0 237 215 15 15 chr5 77130089 77130154 -125955378 + (TA)n Simple_repeat Simple_repeat 1 65 0 333 68 0 0 chr5 77130161 77130205 -125955327 + (TG)n Simple_repeat Simple_repeat 1 44 0 1352 217 53 11 chr5 77131738 77132019 -125953513 + AluJo SINE Alu 1 293 -19 28 48 0 0 chr5 77133164 77133206 -125952326 + AT_rich Low_complexity Low_complexity 1 42 0 1951 127 7 0 chr5 77133561 77133837 -125951695 + AluSq SINE Alu 3 280 -33 216 0 0 0 chr5 77133837 77133861 -125951671 + (CA)n Simple_repeat Simple_repeat 1 24 0 335 284 0 32 chr5 77133861 77133956 -125951576 - L1MC4 LINE L1 -1337 6705 6614 234 0 0 0 chr5 77133966 77133992 -125951540 + (TA)n Simple_repeat Simple_repeat 1 26 0 380 259 0 0 chr5 77134337 77134422 -125951110 - Tigger3(Golem) DNA MER2_type 0 3029 2945 414 258 0 0 chr5 77134435 77134532 -125951000 - Tigger3(Golem) DNA MER2_type -2931 98 2 6653 24 0 0 chr5 77134702 77135863 -125949669 - L1PA3 LINE L1 -434 5721 4561 3592 28 9 2 chr5 77135863 77136293 -125949239 + L1PA3 LINE L1 5721 6155 0 24 0 0 0 chr5 77136862 77136886 -125948646 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr5 77137563 77137591 -125947941 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 77138152 77138185 -125947347 + AT_rich Low_complexity Low_complexity 1 33 0 610 168 40 0 chr5 77138251 77138376 -125947156 - L1PA13 LINE L1 -1 6162 6033 311 233 50 33 chr5 77138566 77138686 -125946846 - MER20 DNA MER1_type -7 212 91 523 211 34 46 chr5 77139943 77140118 -125945414 - MER104 DNA Tc2 -1 179 7 2909 234 61 19 chr5 77140182 77140684 -125944848 - L1MC3 LINE L1 -666 7119 6640 1861 172 123 5 chr5 77140684 77141067 -125944465 - MSTA LTR MaLR 0 428 1 2909 234 61 19 chr5 77141067 77141493 -125944039 - L1MC3 LINE L1 -1145 6640 6152 2449 191 47 2 chr5 77141653 77142181 -125943351 - L1PB4 LINE L1 -1 6155 5604 1641 230 18 12 chr5 77142181 77142694 -125942838 - L1M4 LINE L1 -3456 2690 2185 474 165 0 0 chr5 77142697 77142782 -125942750 - AluS SINE Alu -4 306 222 157 52 0 0 chr5 77143027 77143219 -125942313 + AT_rich Low_complexity Low_complexity 1 192 0 21 0 0 0 chr5 77143564 77143585 -125941947 + AT_rich Low_complexity Low_complexity 1 21 0 1839 101 3 44 chr5 77144027 77144344 -125941188 - AluSq SINE Alu 0 313 10 1333 229 156 17 chr5 77145319 77145896 -125939636 + L1MC4 LINE L1 7161 7817 -225 1989 107 27 0 chr5 77145896 77146196 -125939336 + L1PA16 LINE L1 5525 5832 -334 1383 84 0 0 chr5 77146196 77146363 -125939169 + AluY SINE Alu 1 167 -144 1534 121 0 0 chr5 77147869 77148067 -125937465 + AluSg/x SINE Alu 80 277 -33 271 317 40 0 chr5 77149971 77150072 -125935460 + MIR3 SINE MIR 75 179 -29 2181 105 6 16 chr5 77150336 77150650 -125934882 + AluSx SINE Alu 1 311 -1 415 262 79 8 chr5 77151047 77151173 -125934359 - MIR SINE MIR -114 148 14 246 192 0 0 chr5 77151923 77151975 -125933557 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 217 340 52 65 chr5 77152034 77152187 -125933345 - L2 LINE L2 -99 3173 3023 207 277 50 0 chr5 77153244 77153363 -125932169 + (TA)n Simple_repeat Simple_repeat 2 126 0 1836 138 10 24 chr5 77153511 77153801 -125931731 - AluSx SINE Alu -26 286 1 250 306 12 35 chr5 77154547 77154632 -125930900 - L2 LINE L2 -8 3264 3182 438 272 19 32 chr5 77154746 77154924 -125930608 - MIR SINE MIR -63 145 16 202 339 15 0 chr5 77155605 77155670 -125929862 - MIR3 SINE MIR -39 169 104 243 241 19 0 chr5 77155925 77155979 -125929553 - MLT-int LTR MaLR -500 1235 1181 3755 235 40 36 chr5 77155979 77157091 -125928441 - MSTC-int LTR MaLR -617 1118 2 304 136 34 0 chr5 77157109 77157168 -125928364 - MSTC LTR MaLR -34 394 334 857 162 68 18 chr5 77157283 77157505 -125928027 + Tigger3(Golem) DNA MER2_type 2790 3022 -7 475 196 144 0 chr5 77157515 77157709 -125927823 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 77157763 77157786 -125927746 + AT_rich Low_complexity Low_complexity 1 23 0 2078 95 10 7 chr5 77157902 77158224 -125927308 - AluY SINE Alu 0 311 1 225 0 0 0 chr5 77158375 77158400 -125927132 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1343 117 113 88 chr5 77158402 77158676 -125926856 - AluSx SINE Alu -31 281 1 234 182 45 0 chr5 77158837 77158903 -125926629 + (TTA)n Simple_repeat Simple_repeat 3 71 0 185 313 0 30 chr5 77159359 77159426 -125926106 + L2 LINE L2 3141 3205 -67 1659 223 180 24 chr5 77159533 77160126 -125925406 - MER76 LTR ERV -2 686 1 1552 195 27 54 chr5 77160333 77160540 -125924992 - MER82 DNA MER2_type -254 399 207 1963 140 7 3 chr5 77160540 77160826 -125924706 - AluSx SINE Alu -25 287 1 1552 195 27 54 chr5 77160826 77161028 -125924504 - MER82 DNA MER2_type -446 207 1 1219 162 83 10 chr5 77161034 77161336 -125924196 - Looper DNA T2_type -73 1485 1162 289 202 24 12 chr5 77161344 77161428 -125924104 - FLAM_A SINE Alu 0 133 49 1510 75 11 0 chr5 77161626 77161845 -125923687 + AluY SINE Alu 93 313 0 918 129 22 0 chr5 77162519 77162658 -125922874 - AluJb SINE Alu -170 142 1 25 0 0 0 chr5 77164001 77164026 -125921506 + AT_rich Low_complexity Low_complexity 1 25 0 1097 154 45 61 chr5 77165129 77165441 -125920091 - Looper DNA T2_type -382 1176 870 1764 234 126 133 chr5 77165452 77166057 -125919475 - L2 LINE L2 -338 2976 2248 687 156 15 22 chr5 77166057 77166171 -125919361 + AluJo SINE Alu 1 134 -178 21 0 0 0 chr5 77166171 77166192 -125919340 + AT_rich Low_complexity Low_complexity 1 21 0 1764 234 126 133 chr5 77166192 77166667 -125918865 - L2 LINE L2 -1066 2248 1771 812 169 0 0 chr5 77167097 77167233 -125918299 + AluSp/q SINE Alu 164 299 -14 26 74 0 0 chr5 77167233 77167287 -125918245 + AT_rich Low_complexity Low_complexity 1 54 0 573 253 25 38 chr5 77167362 77167520 -125918012 - MIR SINE MIR -100 162 7 220 315 33 33 chr5 77167670 77167762 -125917770 - L2 LINE L2 -25 3247 3156 542 282 40 73 chr5 77167804 77168052 -125917480 - L2 LINE L2 -3 3269 3030 675 260 84 13 chr5 77168173 77168400 -125917132 - MIR SINE MIR 0 262 20 415 214 159 16 chr5 77168522 77168648 -125916884 + MER63 DNA MER1_type 1 770 -66 2095 120 0 23 chr5 77169171 77169471 -125916061 - AluSx SINE Alu -19 293 1 348 368 8 0 chr5 77169927 77170060 -125915472 + MIR3 SINE MIR 60 193 -15 308 259 12 12 chr5 77170988 77171073 -125914459 + L2 LINE L2 3168 3252 -61 216 0 0 0 chr5 77171074 77171098 -125914434 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1665 168 31 24 chr5 77171481 77171772 -125913760 - AluJo SINE Alu -19 293 1 364 188 0 29 chr5 77172183 77172252 -125913280 - L2 LINE L2 -1 3271 3205 2702 46 0 0 chr5 77172482 77172788 -125912744 - AluY SINE Alu -5 306 1 545 273 113 43 chr5 77173053 77173284 -125912248 - MIR SINE MIR -5 257 11 2154 118 3 6 chr5 77173552 77173865 -125911667 + AluSp SINE Alu 1 312 -1 1206 141 14 19 chr5 77173865 77174078 -125911454 + L1P3 LINE L1 44 255 -6206 792 42 21 0 chr5 77174251 77174347 -125911185 - L1P1 LINE L1 -511 5644 5547 * 18957 25 4 0 chr5 77174340 77176566 -125908966 + L1P LINE L1 2648 4880 -1266 447 256 16 8 chr5 77177221 77177342 -125908190 - MER45A DNA AcHobo 0 178 57 230 265 48 12 chr5 77177497 77177580 -125907952 - MIR3 SINE MIR -9 199 114 23 0 0 0 chr5 77177969 77177992 -125907540 + AT_rich Low_complexity Low_complexity 1 23 0 2765 251 82 35 chr5 77178458 77178583 -125906949 + L1MDa LINE L1 1027 1145 -5395 2271 119 6 3 chr5 77178583 77178894 -125906638 + AluSx SINE Alu 1 312 0 2765 251 82 35 chr5 77178894 77180041 -125905491 + L1MDa LINE L1 1145 2360 -4180 1268 181 31 22 chr5 77180058 77180285 -125905247 + Tigger3b DNA MER2_type 1 229 -1002 2156 154 30 24 chr5 77180285 77180656 -125904876 + THE1C LTR MaLR 1 373 -2 8852 142 74 19 chr5 77180658 77182155 -125903377 + THE1C-int LTR MaLR 1 1580 0 2258 166 11 21 chr5 77182155 77182534 -125902998 + THE1C LTR MaLR 1 375 0 4866 163 43 20 chr5 77182534 77182651 -125902881 + Tigger3b DNA MER2_type 225 338 -2690 2182 51 0 0 chr5 77182651 77182906 -125902626 + AluY SINE Alu 47 301 -10 4866 163 43 20 chr5 77182906 77183767 -125901765 + Tigger3b DNA MER2_type 338 1225 -6 634 192 121 0 chr5 77183778 77183976 -125901556 + L1MDa LINE L1 2385 2606 -3934 23 0 0 0 chr5 77184033 77184056 -125901476 + AT_rich Low_complexity Low_complexity 1 23 0 2198 91 3 7 chr5 77184173 77184497 -125901035 - AluY SINE Alu 0 311 1 225 0 0 0 chr5 77184652 77184677 -125900855 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1521 121 93 89 chr5 77184679 77184959 -125900573 - AluSx SINE Alu -31 281 1 192 316 120 15 chr5 77185400 77185533 -125899999 + MIR SINE MIR 13 159 -103 2730 207 69 54 chr5 77186142 77186900 -125898632 + MER4E LTR ERV1 1 769 -10 29 70 0 0 chr5 77188689 77188746 -125896786 + AT_rich Low_complexity Low_complexity 1 57 0 563 312 162 41 chr5 77189210 77189723 -125895809 + L1MEd LINE L1 523 1097 -5022 28 0 0 0 chr5 77190128 77190156 -125895376 + AT_rich Low_complexity Low_complexity 1 28 0 5341 116 25 20 chr5 77190327 77191163 -125894369 - L1PA14 LINE L1 0 6161 5322 2115 120 0 0 chr5 77191164 77191447 -125894085 - AluSg SINE Alu -27 283 1 288 235 0 12 chr5 77191447 77191532 -125894000 - L1MEc LINE L1 -4679 2042 1959 1171 186 186 0 chr5 77191746 77191999 -125893533 + AluSx SINE Alu 1 300 -12 1582 174 47 27 chr5 77192255 77192554 -125892978 - AluJb SINE Alu -6 306 2 2211 109 0 0 chr5 77192570 77192890 -125892642 - AluSq SINE Alu 0 320 1 1994 141 0 20 chr5 77192893 77193197 -125892335 - AluSx SINE Alu -10 302 5 885 167 46 38 chr5 77193212 77193451 -125892081 - L1MD3 LINE L1 0 7995 7755 777 172 0 37 chr5 77193720 77193882 -125891650 + FLAM_C SINE Alu 1 157 0 308 356 77 0 chr5 77194126 77194230 -125891302 - L2 LINE L2 -8 3264 3153 1938 148 0 3 chr5 77195344 77195665 -125889867 - AluJb SINE Alu 0 320 1 25 0 0 0 chr5 77198259 77198284 -125887248 + AT_rich Low_complexity Low_complexity 1 25 0 348 217 114 36 chr5 77198431 77198597 -125886935 - L1 LINE L1 -1631 4515 4337 424 248 81 0 chr5 77198599 77198748 -125886784 - L1MEc LINE L1 -4826 1714 1554 * 3519 157 113 67 chr5 77198741 77198889 -125886643 - L1MB4 LINE L1 -2 6178 6038 2289 97 3 3 chr5 77198889 77199199 -125886333 + AluSx SINE Alu 1 310 -2 3519 157 113 67 chr5 77199199 77199740 -125885792 - L1MB4 LINE L1 -142 6038 5523 2055 145 0 0 chr5 77199740 77200036 -125885496 - AluSx SINE Alu -16 296 1 1815 158 3 41 chr5 77200038 77200260 -125885272 - AluJo SINE Alu -7 305 97 2449 87 0 0 chr5 77200260 77200571 -125884961 - AluSx SINE Alu -1 311 1 1815 158 3 41 chr5 77200571 77200665 -125884867 - AluJo SINE Alu -215 97 1 3519 157 113 67 chr5 77200665 77201230 -125884302 - L1MB4 LINE L1 -657 5523 4895 2312 104 0 16 chr5 77201231 77201540 -125883992 - AluSg SINE Alu -6 304 1 714 272 42 54 chr5 77202113 77202200 -125883332 - MIR SINE MIR -15 247 160 2413 55 14 0 chr5 77202200 77202519 -125883013 - AluY SINE Alu 0 323 1 714 272 42 54 chr5 77202519 77202669 -125882863 - MIR SINE MIR -102 160 12 2038 117 4 7 chr5 77202674 77202955 -125882577 + AluSq SINE Alu 1 280 -33 291 75 57 0 chr5 77202971 77203024 -125882508 + AluSp/q SINE Alu 248 303 0 1864 150 20 10 chr5 77203368 77203662 -125881870 + AluJo SINE Alu 1 297 -15 228 216 0 0 chr5 77203663 77203714 -125881818 + L1MC4 LINE L1 6648 6698 -1344 2318 100 0 10 chr5 77203791 77204100 -125881432 - AluSx SINE Alu -6 306 1 2279 106 0 3 chr5 77204116 77204428 -125881104 - AluSx SINE Alu -1 311 1 386 383 54 0 chr5 77204466 77204633 -125880899 - MIR3 SINE MIR -6 202 27 1632 171 33 23 chr5 77204994 77205299 -125880233 + AluJo SINE Alu 1 308 -4 185 250 0 0 chr5 77206170 77206210 -125879322 - MER5A DNA MER1_type -1 188 149 1454 225 76 34 chr5 77206295 77206335 -125879197 + L1MC4 LINE L1 6449 6486 -1556 2218 118 0 3 chr5 77206335 77206640 -125878892 + AluSx SINE Alu 1 304 -8 1454 225 76 34 chr5 77206640 77207035 -125878497 + L1MC4 LINE L1 6486 6902 -1140 292 129 43 57 chr5 77207960 77208030 -125877502 - L1ME3A LINE L1 -7 6163 6095 1912 108 7 4 chr5 77208031 77208300 -125877232 - AluSq SINE Alu 0 313 44 225 322 56 61 chr5 77208300 77208514 -125877018 - L2 LINE L2 -236 3036 2824 2556 65 0 0 chr5 77208610 77208916 -125876616 + AluY SINE Alu 1 306 -5 364 188 0 29 chr5 77209146 77209215 -125876317 + L2 LINE L2 3205 3271 -1 1665 168 31 24 chr5 77209626 77209917 -125875615 + AluJo SINE Alu 1 293 -19 2264 115 0 6 chr5 77210205 77210519 -125875013 - AluSx SINE Alu 0 312 1 643 142 0 187 chr5 77210755 77210850 -125874682 + FLAM_A SINE Alu 1 58 -244 2632 61 0 0 chr5 77210850 77211161 -125874371 + AluY SINE Alu 1 311 0 643 142 0 187 chr5 77211161 77211220 -125874312 + FLAM_A SINE Alu 58 126 -176 21 0 0 0 chr5 77211805 77211826 -125873706 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr5 77211858 77211879 -125873653 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2140 119 0 13 chr5 77212687 77212989 -125872543 + AluSx SINE Alu 1 298 -14 554 121 36 121 chr5 77213021 77213161 -125872371 + L1MA9 LINE L1 6185 6312 0 975 242 158 83 chr5 77213447 77213520 -125872012 - LTR41 LTR ERVL -3 770 704 2108 87 3 60 chr5 77213520 77213842 -125871690 + AluSx SINE Alu 1 305 0 2420 149 8 0 chr5 77213845 77214207 -125871325 - MER47A DNA MER2_type -1 365 1 975 242 158 83 chr5 77214207 77214839 -125870693 - LTR41 LTR ERVL -70 703 7 2418 92 3 0 chr5 77215108 77215414 -125870118 + AluSp SINE Alu 1 307 -6 259 146 0 0 chr5 77215501 77215542 -125869990 + MER58 DNA MER1_type 54 94 -2326 300 136 85 0 chr5 77215543 77215602 -125869930 + MER58 DNA MER1_type 2341 2404 -16 281 274 126 15 chr5 77215636 77215771 -125869761 + L2 LINE L2 101 250 -3064 1808 147 99 31 chr5 77215805 77216158 -125869374 - MSTA LTR MaLR -51 377 1 8964 163 35 10 chr5 77216158 77217627 -125867905 - MSTA-int LTR MaLR 0 1651 137 2406 84 3 6 chr5 77217627 77217938 -125867594 + AluSx SINE Alu 2 311 -1 8964 163 35 10 chr5 77217938 77218079 -125867453 - MSTA-int LTR MaLR -1514 137 1 1439 120 23 9 chr5 77218079 77218295 -125867237 - MSTA LTR MaLR 0 428 210 298 263 175 0 chr5 77218300 77218437 -125867095 + L2 LINE L2 210 370 -2944 2110 229 122 131 chr5 77218621 77219097 -125866435 + L2 LINE L2 1771 2250 -1064 835 156 0 7 chr5 77219097 77219232 -125866300 - AluJo SINE Alu -178 134 1 2110 229 122 131 chr5 77219232 77219838 -125865694 + L2 LINE L2 2250 2976 -338 2372 151 48 87 chr5 77219849 77220172 -125865360 + Looper DNA T2_type 870 1157 -401 576 203 49 8 chr5 77220172 77220295 -125865237 + FLAM_A SINE Alu 3 130 -3 2372 151 48 87 chr5 77220295 77220612 -125864920 + Looper DNA T2_type 1157 1485 -73 2662 221 29 42 chr5 77220618 77220821 -125864711 + MER82 DNA MER2_type 1 205 -448 2047 136 0 3 chr5 77220821 77221108 -125864424 + AluSx SINE Alu 3 288 -24 2662 221 29 42 chr5 77221108 77221566 -125863966 + MER82 DNA MER2_type 205 653 0 433 278 111 51 chr5 77221587 77221875 -125863657 + L1MC/D LINE L1 5283 5597 -2211 2343 81 3 7 chr5 77221875 77222172 -125863360 + AluSg SINE Alu 1 296 -14 433 278 111 51 chr5 77222172 77222235 -125863297 + L1MC/D LINE L1 5597 5655 -2153 23 0 0 0 chr5 77222360 77222383 -125863149 + AT_rich Low_complexity Low_complexity 1 23 0 3277 35 9 9 chr5 77222395 77222817 -125862715 - L1PA3 LINE L1 -3 6152 5731 40 21 0 0 chr5 77223795 77223842 -125861690 + AT_rich Low_complexity Low_complexity 1 47 0 240 212 0 0 chr5 77223885 77223951 -125861581 + T-rich Low_complexity Low_complexity 2 67 0 242 353 32 19 chr5 77224205 77224361 -125861171 + L2 LINE L2 2431 2588 -726 396 294 94 68 chr5 77225458 77225607 -125859925 - MER65A LTR ERV1 -9 436 292 6139 93 1 19 chr5 77225607 77227170 -125858362 + L1PA8A LINE L1 4592 6131 0 396 294 94 68 chr5 77227170 77227445 -125858087 - MER65A LTR ERV1 -153 292 1 2949 260 71 51 chr5 77227445 77229114 -125856418 - MER65A-int LTR ERV1 0 4871 3355 2003 196 48 32 chr5 77229096 77229653 -125855879 - MER41-int LTR ERV1 -1112 3824 3259 * 1275 82 39 0 chr5 77230161 77230343 -125855189 + L1PB1 LINE L1 5600 5788 -363 432 200 0 0 chr5 77230350 77230440 -125855092 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 2654 100 0 0 chr5 77230442 77230811 -125854721 + L1PB1 LINE L1 5782 6150 -1 1681 6 0 0 chr5 77231012 77231194 -125854338 + AluYa5 SINE Alu 130 311 0 1252 168 113 119 chr5 77233548 77234148 -125851384 - MER41-int LTR ERV1 -1755 4576 2611 5629 107 33 9 chr5 77234167 77235037 -125850495 - L1PA15 LINE L1 0 6165 5275 1785 290 48 47 chr5 77235039 77235784 -125849748 - L1PA12 LINE L1 -6834 747 2 800 221 74 118 chr5 77235791 77236387 -125849145 - MER41-int LTR ERV1 -1697 3183 2329 586 263 71 69 chr5 77236363 77237052 -125848480 - MER41-int LTR ERV1 -2943 2980 2294 * 192 77 0 0 chr5 77237052 77237078 -125848454 + (CA)n Simple_repeat Simple_repeat 2 27 0 586 263 71 69 chr5 77237078 77237351 -125848181 - MER41-int LTR ERV1 -3629 2294 1150 299 204 186 9 chr5 77237391 77237504 -125848028 - MER34C LTR ERV1 -293 292 160 379 192 40 30 chr5 77237506 77237605 -125847927 - MER41-int LTR ERV1 -4133 990 891 672 291 92 40 chr5 77237937 77238067 -125847465 - MER65A LTR ERV1 0 445 323 2109 128 150 5 chr5 77238067 77238441 -125847091 - MSTA LTR MaLR 0 428 1 672 291 92 40 chr5 77238441 77238733 -125846799 - MER65A LTR ERV1 -122 323 1 2193 118 3 0 chr5 77238793 77239097 -125846435 + AluSp SINE Alu 1 305 -8 534 256 93 39 chr5 77239821 77240079 -125845453 + MER20B DNA MER1_type 234 505 -278 225 0 0 0 chr5 77240295 77240320 -125845212 + (TG)n Simple_repeat Simple_repeat 2 26 0 1976 143 32 40 chr5 77240413 77240791 -125844741 - THE1C LTR MaLR 0 375 1 1844 166 107 13 chr5 77240823 77241214 -125844318 + MSTA LTR MaLR 1 428 0 293 219 95 12 chr5 77241283 77241407 -125844125 + MER31B LTR ERV1 1 164 -302 293 307 42 24 chr5 77242751 77242917 -125842615 + L1MEc LINE L1 1519 1687 -4709 25 0 0 0 chr5 77243381 77243406 -125842126 + AT_rich Low_complexity Low_complexity 1 25 0 369 228 24 24 chr5 77243822 77243945 -125841587 - L1ME1 LINE L1 -279 5887 5765 549 216 173 22 chr5 77243958 77244143 -125841389 + MER20 DNA MER1_type 1 213 -6 786 238 176 27 chr5 77244148 77244522 -125841010 - L1ME1 LINE L1 -406 5758 5329 26 82 0 0 chr5 77244577 77244638 -125840894 + AT_rich Low_complexity Low_complexity 1 61 0 1276 268 92 43 chr5 77244818 77245276 -125840256 - L1ME1 LINE L1 -1150 4996 4562 2484 143 24 12 chr5 77245276 77245695 -125839837 - MSTA LTR MaLR 0 428 5 1276 268 92 43 chr5 77245695 77246325 -125839207 - L1ME1 LINE L1 -1584 4562 3855 23 0 0 0 chr5 77246557 77246580 -125838952 + AT_rich Low_complexity Low_complexity 1 23 0 2015 142 6 3 chr5 77247126 77247437 -125838095 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 77247580 77247601 -125837931 + AT_rich Low_complexity Low_complexity 1 21 0 237 215 15 15 chr5 77247770 77247835 -125837697 + (TA)n Simple_repeat Simple_repeat 1 65 0 366 80 0 0 chr5 77247842 77247892 -125837640 + (TG)n Simple_repeat Simple_repeat 1 50 0 389 319 108 32 chr5 77248498 77248777 -125836755 - L1MC/D LINE L1 -2213 5595 5296 696 292 83 73 chr5 77248952 77249601 -125835931 - L1ME3A LINE L1 -252 5918 5271 326 329 63 48 chr5 77249771 77250087 -125835445 - L1ME3A LINE L1 -1424 4722 4402 24 96 0 0 chr5 77251361 77251434 -125834098 + AT_rich Low_complexity Low_complexity 1 73 0 21 0 0 0 chr5 77251851 77251872 -125833660 + AT_rich Low_complexity Low_complexity 1 21 0 233 256 64 0 chr5 77252608 77252686 -125832846 - L1MC4 LINE L1 -1339 6703 6621 365 79 0 16 chr5 77253635 77253698 -125831834 + (CA)n Simple_repeat Simple_repeat 2 63 0 256 208 20 119 chr5 77253902 77254003 -125831529 + MER110A LTR ERV1 80 170 -298 432 335 60 4 chr5 77254076 77254342 -125831190 + MER110 LTR ERV1 185 465 -26 1994 188 94 45 chr5 77254709 77255858 -125829674 + pTR5 LTR ERV1 743 2179 -259 11333 235 26 39 chr5 77256258 77256990 -125828542 - L1PA16 LINE L1 -104 7500 6760 1813 83 19 89 chr5 77256990 77257304 -125828228 - L1PA10 LINE L1 -1 6167 5876 11333 235 26 39 chr5 77257304 77258240 -125827292 - L1PA16 LINE L1 -844 6760 5813 1095 184 147 59 chr5 77258240 77258512 -125827020 - AluJo SINE Alu -5 297 2 11333 235 26 39 chr5 77258512 77262243 -125823289 - L1PA16 LINE L1 -1791 5813 2182 409 362 68 10 chr5 77262367 77262574 -125822958 - L1PA16 LINE L1 -6564 1010 792 2004 127 9 16 chr5 77263267 77263582 -125821950 + AluSq SINE Alu 1 313 0 1059 110 7 0 chr5 77263732 77263878 -125821654 - AluSg/x SINE Alu -15 295 149 238 335 126 33 chr5 77264119 77264301 -125821231 + MLT1J1 LTR MaLR 248 446 0 255 61 0 0 chr5 77264568 77264601 -125820931 + (A)n Simple_repeat Simple_repeat 1 33 0 736 278 28 9 chr5 77264639 77264851 -125820681 - MER20 DNA MER1_type -2 217 2 286 328 9 17 chr5 77266046 77266162 -125819370 - MIR SINE MIR -24 238 124 1415 265 51 13 chr5 77266430 77266883 -125818649 + MLT1D LTR MaLR 36 505 0 1693 174 130 18 chr5 77267327 77267711 -125817821 - MSTA LTR MaLR -1 427 1 8980 157 9 35 chr5 77267711 77269331 -125816201 - MSTA-int LTR MaLR 0 1580 3 1818 134 163 19 chr5 77269333 77269707 -125815825 - MSTA LTR MaLR 0 428 1 297 128 0 0 chr5 77270479 77270526 -125815006 + (TG)n Simple_repeat Simple_repeat 2 48 0 1080 190 154 3 chr5 77270597 77270668 -125814864 - MER47A DNA MER2_type -1972 351 292 12409 61 8 0 chr5 77270668 77273056 -125812476 + L1PA6 LINE L1 3742 6150 -4 1080 190 154 3 chr5 77273056 77273289 -125812243 - MER47A DNA MER2_type -2031 292 1 395 329 43 10 chr5 77273809 77274016 -125811516 - MER110 LTR ERV1 -36 455 242 517 200 123 23 chr5 77274221 77274439 -125811093 + MER33 DNA MER1_type 1 226 -98 889 271 9 0 chr5 77274568 77274796 -125810736 - MLT1D LTR MaLR -1 504 275 898 180 11 26 chr5 77274796 77274985 -125810547 - MLT1A2 LTR MaLR 0 374 189 336 301 0 0 chr5 77275059 77275162 -125810370 - MLT1A2 LTR MaLR -214 160 58 271 170 0 0 chr5 77275215 77275262 -125810270 - MLT1A2 LTR MaLR -327 47 1 670 229 65 14 chr5 77275301 77275515 -125810017 - MLT1D LTR MaLR -280 225 1 1034 276 99 83 chr5 77275722 77277228 -125808304 - MER110-int LTR ERV1 -1057 3590 1952 3501 185 38 0 chr5 77277326 77278056 -125807476 + Tigger2 DNA MER2_type 2 759 -1959 888 152 98 90 chr5 77278110 77278366 -125807166 + Tigger2 DNA MER2_type 2451 2708 -10 219 370 102 14 chr5 77279149 77279365 -125806167 - L2 LINE L2 -1051 2263 2029 9907 35 13 1 chr5 77279881 77281200 -125804332 - L1P LINE L1 -736 5419 4090 6145 38 0 1 chr5 77281200 77281929 -125803603 + L1PA3 LINE L1 5414 6152 -3 29 0 0 0 chr5 77282081 77282110 -125803422 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr5 77282437 77282488 -125803044 + AT_rich Low_complexity Low_complexity 1 51 0 459 342 26 0 chr5 77283863 77284097 -125801435 + LTR16A LTR ERVL 27 266 -184 374 69 17 0 chr5 77284400 77284458 -125801074 + (TG)n Simple_repeat Simple_repeat 1 59 0 303 254 0 162 chr5 77284970 77285143 -125800389 + L2 LINE L2 3165 3309 -4 302 135 0 0 chr5 77287658 77287710 -125797822 - MADE1 DNA Mariner -28 52 1 1352 217 53 11 chr5 77289021 77289302 -125796230 + AluJo SINE Alu 1 293 -19 28 48 0 0 chr5 77290447 77290489 -125795043 + AT_rich Low_complexity Low_complexity 1 42 0 2183 121 7 0 chr5 77290841 77291146 -125794386 + AluSq SINE Alu 3 309 -4 778 94 8 8 chr5 77291146 77291273 -125794259 + (TA)n Simple_repeat Simple_repeat 1 127 0 367 262 0 0 chr5 77291623 77291707 -125793825 - Tigger3(Golem) DNA MER2_type 0 3037 2954 414 258 0 0 chr5 77291720 77291817 -125793715 - Tigger3(Golem) DNA MER2_type -2931 98 2 6619 23 2 0 chr5 77291987 77293147 -125792385 - L1PA3 LINE L1 -434 5721 4561 3542 28 14 2 chr5 77293147 77293575 -125791957 + L1PA3 LINE L1 5721 6155 0 24 0 0 0 chr5 77294144 77294168 -125791364 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr5 77294845 77294873 -125790659 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 77295434 77295467 -125790065 + AT_rich Low_complexity Low_complexity 1 33 0 610 168 40 0 chr5 77295533 77295658 -125789874 - L1PA13 LINE L1 -1 6162 6033 647 249 24 24 chr5 77295848 77296053 -125789479 - MER20 DNA MER1_type -7 212 8 527 211 7 72 chr5 77296414 77296566 -125788966 + MER20 DNA MER1_type 26 167 -52 2271 63 3 17 chr5 77296879 77297178 -125788354 + AluY SINE Alu 1 295 -16 222 37 0 0 chr5 77297668 77297695 -125787837 + (TA)n Simple_repeat Simple_repeat 1 27 0 523 211 34 46 chr5 77298510 77298685 -125786847 - MER104 DNA Tc2 -1 179 7 2894 223 75 21 chr5 77298749 77299239 -125786293 - L1MC3 LINE L1 -666 7119 6657 1861 172 123 5 chr5 77299239 77299622 -125785910 - MSTA LTR MaLR 0 428 1 2894 223 75 21 chr5 77299622 77300049 -125785483 - L1MC3 LINE L1 -1128 6657 6152 2432 193 47 2 chr5 77300209 77300737 -125784795 - L1PB4 LINE L1 -1 6857 6306 1706 221 14 68 chr5 77300737 77301253 -125784279 - L1PB4 LINE L1 -3456 3392 2949 2217 125 0 0 chr5 77301253 77301556 -125783976 - AluSg SINE Alu -7 303 1 1706 221 14 68 chr5 77301556 77301957 -125783575 - L1PB4 LINE L1 -3899 2949 2528 309 273 0 0 chr5 77302035 77302123 -125783409 - MIR SINE MIR -75 187 100 30 0 0 0 chr5 77302460 77302490 -125783042 + AT_rich Low_complexity Low_complexity 1 30 0 268 302 94 9 chr5 77303770 77303876 -125781656 - L2 LINE L2 0 3272 3158 21 0 0 0 chr5 77304271 77304292 -125781240 + AT_rich Low_complexity Low_complexity 1 21 0 387 374 47 19 chr5 77304661 77304982 -125780550 - L2 LINE L2 -1007 2307 1978 468 287 20 7 chr5 77306208 77306358 -125779174 + MLT1F LTR MaLR 16 167 -400 1285 187 40 49 chr5 77306566 77306658 -125778874 + MLT1A1 LTR MaLR 43 134 -231 2040 120 0 28 chr5 77306658 77306990 -125778542 - AluSg SINE Alu 0 324 1 1285 187 40 49 chr5 77306990 77307222 -125778310 + MLT1A1 LTR MaLR 134 365 0 589 224 44 44 chr5 77307222 77307405 -125778127 + MLT1F LTR MaLR 333 515 -27 931 191 77 0 chr5 77307920 77307985 -125777547 - MER3 DNA MER1_type 0 209 150 2422 66 0 7 chr5 77307985 77308290 -125777242 + AluY SINE Alu 1 303 -8 931 191 77 0 chr5 77308290 77308418 -125777114 - MER3 DNA MER1_type -59 150 1 1582 207 13 56 chr5 77308438 77308506 -125777026 - MLT1A2 LTR MaLR 0 374 305 1966 158 30 0 chr5 77308506 77308809 -125776723 + AluSx SINE Alu 1 312 0 1582 207 13 56 chr5 77308809 77309086 -125776446 - MLT1A2 LTR MaLR -69 305 45 2401 66 3 13 chr5 77309086 77309390 -125776142 - AluY SINE Alu -10 301 1 1582 207 13 56 chr5 77309390 77309434 -125776098 - MLT1A2 LTR MaLR -329 45 1 23 33 0 0 chr5 77309665 77309695 -125775837 + AT_rich Low_complexity Low_complexity 1 30 0 1210 127 91 0 chr5 77309711 77309932 -125775600 - L1MA6 LINE L1 -4 6296 6056 1578 157 80 0 chr5 77309932 77310232 -125775300 - MER2 DNA MER2_type -21 324 1 295 240 115 19 chr5 77310238 77310342 -125775190 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 77310778 77310799 -125774733 + AT_rich Low_complexity Low_complexity 1 21 0 610 147 0 0 chr5 77315674 77315776 -125769756 + AluSp/q SINE Alu 210 311 -2 698 192 15 0 chr5 77315778 77315908 -125769624 + FLAM_C SINE Alu 1 132 -1 1165 128 49 5 chr5 77315917 77316120 -125769412 - THE1B LTR MaLR -150 214 3 9895 101 60 47 chr5 77316127 77317680 -125767852 - THE1B-int LTR MaLR -6 1574 2 2337 123 25 6 chr5 77317681 77318038 -125767494 - THE1B LTR MaLR 0 364 1 465 244 50 8 chr5 77318137 77318256 -125767276 - MLT1G1 LTR MaLR -456 139 16 893 157 16 54 chr5 77318317 77318502 -125767030 + FAM SINE Alu 1 49 0 2049 212 135 61 chr5 77319160 77319618 -125765914 - MER82 DNA MER2_type 0 653 138 1965 110 0 58 chr5 77319618 77319926 -125765606 - AluSx SINE Alu -22 290 1 2049 212 135 61 chr5 77319926 77320075 -125765457 - MER82 DNA MER2_type -515 138 1 2129 101 0 7 chr5 77320257 77320555 -125764977 - AluSx SINE Alu -15 297 2 1546 109 23 0 chr5 77320556 77320875 -125764657 - L1P4 LINE L1 -676 5485 5161 1719 138 7 0 chr5 77321396 77321665 -125763867 + AluSx SINE Alu 39 309 -3 2183 104 0 0 chr5 77321699 77321996 -125763536 + AluSg SINE Alu 1 297 -13 303 93 0 0 chr5 77322441 77322484 -125763048 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1426 157 39 57 chr5 77322491 77322642 -125762890 - AluJo SINE Alu -37 275 130 1873 138 10 0 chr5 77322642 77322932 -125762600 + AluSx SINE Alu 1 293 -19 1426 157 39 57 chr5 77322932 77323060 -125762472 - AluJo SINE Alu -182 130 1 1771 125 7 24 chr5 77323885 77324196 -125761336 + AluSx SINE Alu 1 306 0 243 257 191 19 chr5 77324246 77324351 -125761181 + L2 LINE L2 2938 3060 -212 1459 167 43 46 chr5 77324421 77324602 -125760930 - AluJo SINE Alu -7 305 124 1728 119 17 34 chr5 77324602 77324897 -125760635 - AluSg SINE Alu -20 290 1 1459 167 43 46 chr5 77324897 77325020 -125760512 - AluJo SINE Alu -188 124 2 1949 145 3 0 chr5 77325418 77325773 -125759759 - AluSx SINE Alu 0 356 1 877 102 0 0 chr5 77326093 77326211 -125759321 - FLAM_C SINE Alu -15 118 1 277 211 0 0 chr5 77326369 77326426 -125759106 - MIR3 SINE MIR -5 203 147 241 274 98 39 chr5 77326418 77326520 -125759012 - MER5A DNA MER1_type -8 181 74 * 1759 171 10 10 chr5 77326520 77326829 -125758703 - AluJo SINE Alu -3 309 1 1170 129 0 0 chr5 77326839 77327010 -125758522 - AluSg/x SINE Alu -3 309 139 463 184 82 20 chr5 77327010 77327108 -125758424 + AluSg/x SINE Alu 194 297 -12 256 163 0 20 chr5 77327446 77327495 -125758037 - FLAM SINE Alu 0 133 86 1074 143 5 35 chr5 77327495 77327698 -125757834 - AluJo SINE Alu -92 220 24 934 191 77 0 chr5 77328357 77328422 -125757110 - MER3 DNA MER1_type 0 209 150 2308 76 0 0 chr5 77328422 77328726 -125756806 + AluY SINE Alu 1 304 -7 934 191 77 0 chr5 77328726 77328854 -125756678 - MER3 DNA MER1_type -59 150 1 1551 219 15 29 chr5 77328874 77328942 -125756590 - MLT1A2 LTR MaLR 0 374 307 1887 152 30 0 chr5 77328942 77329245 -125756287 + AluSx SINE Alu 1 312 0 1551 219 15 29 chr5 77329245 77329519 -125756013 - MLT1A2 LTR MaLR -67 307 37 1046 249 3 16 chr5 77329523 77329828 -125755704 - AluY SINE Alu -10 301 1 240 171 0 0 chr5 77329831 77329872 -125755660 - MLT1A2 LTR MaLR -333 41 1 24 91 0 0 chr5 77329942 77330008 -125755524 + AT_rich Low_complexity Low_complexity 1 66 0 26 30 0 0 chr5 77330046 77330079 -125755453 + AT_rich Low_complexity Low_complexity 1 33 0 1245 127 91 0 chr5 77330149 77330370 -125755162 - L1MA6 LINE L1 -4 6296 6056 1714 157 80 0 chr5 77330370 77330670 -125754862 - MER2 DNA MER2_type -21 324 1 318 202 135 39 chr5 77330676 77330780 -125754752 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 77331216 77331237 -125754295 + AT_rich Low_complexity Low_complexity 1 21 0 624 154 0 0 chr5 77334493 77334597 -125750935 + AluSp/q SINE Alu 210 313 0 711 192 15 0 chr5 77334597 77334727 -125750805 + FLAM_C SINE Alu 1 132 -1 1269 128 49 5 chr5 77334736 77334939 -125750593 - THE1B LTR MaLR -150 214 3 9780 106 57 43 chr5 77334946 77336497 -125749035 - THE1B-int LTR MaLR -6 1574 2 2302 129 25 6 chr5 77336498 77336855 -125748677 - THE1B LTR MaLR 0 364 1 434 252 50 8 chr5 77336954 77337073 -125748459 - MLT1G1 LTR MaLR -456 139 16 921 147 16 54 chr5 77337134 77337318 -125748214 + FAM SINE Alu 1 48 -1 2024 214 135 61 chr5 77337984 77338442 -125747090 - MER82 DNA MER2_type 0 653 138 2010 108 0 49 chr5 77338442 77338747 -125746785 - AluSx SINE Alu -22 290 1 2024 214 135 61 chr5 77338747 77338896 -125746636 - MER82 DNA MER2_type -515 138 1 2082 107 0 7 chr5 77339075 77339374 -125746158 - AluSx SINE Alu -14 298 2 1546 109 23 0 chr5 77339375 77339694 -125745838 - L1P4 LINE L1 -676 5485 5161 1741 134 8 0 chr5 77340215 77340483 -125745049 + AluSx SINE Alu 39 308 -4 2162 108 0 0 chr5 77340517 77340814 -125744718 + AluSg SINE Alu 1 297 -13 426 85 0 0 chr5 77341259 77341318 -125744214 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1441 154 39 57 chr5 77341325 77341476 -125744056 - AluJo SINE Alu -37 275 130 1861 138 10 0 chr5 77341476 77341766 -125743766 + AluSx SINE Alu 1 293 -19 1441 154 39 57 chr5 77341766 77341894 -125743638 - AluJo SINE Alu -182 130 1 1777 131 6 35 chr5 77342719 77343033 -125742499 + AluSx SINE Alu 1 305 -7 243 257 191 19 chr5 77343082 77343187 -125742345 + L2 LINE L2 2938 3060 -212 1412 174 43 46 chr5 77343257 77343438 -125742094 - AluJo SINE Alu -7 305 124 1696 122 17 34 chr5 77343438 77343732 -125741800 - AluSg SINE Alu -21 289 1 1412 174 43 46 chr5 77343732 77343855 -125741677 - AluJo SINE Alu -188 124 2 1972 139 3 0 chr5 77344253 77344614 -125740918 - AluSx SINE Alu 0 362 1 877 102 0 0 chr5 77344934 77345052 -125740480 - FLAM_C SINE Alu -15 118 1 255 228 0 0 chr5 77345210 77345267 -125740265 - MIR3 SINE MIR -5 203 147 241 274 98 39 chr5 77345259 77345361 -125740171 - MER5A DNA MER1_type -8 181 74 * 1759 171 10 10 chr5 77345361 77345670 -125739862 - AluJo SINE Alu -3 309 1 1170 129 0 0 chr5 77345680 77345851 -125739681 - AluSg/x SINE Alu -3 309 139 463 184 82 20 chr5 77345851 77345949 -125739583 + AluSg/x SINE Alu 195 298 -12 256 163 0 20 chr5 77346287 77346336 -125739196 - FLAM SINE Alu 0 133 86 1074 143 5 35 chr5 77346336 77346539 -125738993 - AluJo SINE Alu -92 220 24 1596 175 3 3 chr5 77347079 77347376 -125738156 - AluJo SINE Alu -15 297 1 824 146 0 8 chr5 77347614 77347744 -125737788 - FLAM_C SINE Alu -8 135 7 1523 163 90 4 chr5 77347752 77348029 -125737503 - AluJo SINE Alu 0 302 2 234 345 31 84 chr5 77348036 77348297 -125737235 + L2 LINE L2 2993 3239 -33 1920 149 3 0 chr5 77348345 77348646 -125736886 - AluSx SINE Alu -10 302 1 1717 153 7 42 chr5 77348973 77349280 -125736252 - AluSx SINE Alu -16 296 1 1462 188 14 24 chr5 77349343 77349478 -125736054 + AluJb SINE Alu 2 137 -175 2193 99 0 7 chr5 77349478 77349780 -125735752 + AluSg SINE Alu 1 300 -10 1462 188 14 24 chr5 77349780 77349937 -125735595 + AluJb SINE Alu 137 291 -21 543 179 94 8 chr5 77349939 77350056 -125735476 + MER3 DNA MER1_type 22 148 -61 1651 175 21 0 chr5 77350064 77350349 -125735183 - AluJb SINE Alu -21 291 1 1279 177 141 0 chr5 77350390 77350638 -125734894 - AluJb SINE Alu -29 283 1 2612 29 3 0 chr5 77350831 77351140 -125734392 - L1PA3 LINE L1 0 6155 5846 1759 157 3 3 chr5 77351908 77352202 -125733330 + AluJo SINE Alu 1 294 -18 2345 62 13 7 chr5 77352204 77352511 -125733021 + AluY SINE Alu 1 309 -2 435 74 0 0 chr5 77352915 77352969 -125732563 + Alu SINE Alu 7 60 -258 1724 123 0 4 chr5 77352980 77353248 -125732284 + AluSg SINE Alu 1 267 -43 309 275 64 0 chr5 77353550 77353659 -125731873 - MLT1I LTR MaLR 0 409 294 1177 205 43 4 chr5 77353918 77354172 -125731360 - MLT2D LTR ERVL -105 309 46 21 36 0 0 chr5 77354629 77354657 -125730875 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 77356849 77356879 -125728653 + AT_rich Low_complexity Low_complexity 1 30 0 921 338 54 19 chr5 77358417 77359126 -125726406 + L2 LINE L2 2507 3309 -4 307 321 121 18 chr5 77359205 77359370 -125726162 + MIR SINE MIR 50 231 -31 180 0 0 0 chr5 77359730 77359750 -125725782 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1580 166 219 17 chr5 77359882 77360238 -125725294 - MSTA LTR MaLR 0 428 1 244 314 50 33 chr5 77360331 77360452 -125725080 + L2 LINE L2 2931 3053 -219 1779 139 26 13 chr5 77360920 77361223 -125724309 - AluSx SINE Alu -5 307 1 2196 130 3 48 chr5 77361300 77361678 -125723854 + L1PA13 LINE L1 5799 6159 -4 1723 121 104 4 chr5 77361678 77361958 -125723574 + AluSq SINE Alu 1 308 -5 2124 87 3 3 chr5 77362415 77362703 -125722829 + AluSq SINE Alu 5 292 -21 454 348 13 43 chr5 77362717 77362950 -125722582 - L1ME3 LINE L1 -272 5890 5665 225 214 0 36 chr5 77363546 77363602 -125721930 - L1P4 LINE L1 -602 5572 5519 439 318 190 38 chr5 77363628 77364185 -125721347 + L2 LINE L2 2236 2877 -437 190 348 110 6 chr5 77364345 77364509 -125721023 + L2 LINE L2 3131 3311 -2 4409 213 41 10 chr5 77365074 77365268 -125720264 + L1PB4 LINE L1 4188 4375 -1779 243 0 0 0 chr5 77365268 77365295 -125720237 + (CA)n Simple_repeat Simple_repeat 2 28 0 4409 213 41 10 chr5 77365295 77366307 -125719225 + L1PB4 LINE L1 4375 5429 -725 2544 101 11 19 chr5 77366317 77366695 -125718837 - THE1C LTR MaLR 0 375 1 22 94 0 0 chr5 77367040 77367104 -125718428 + AT_rich Low_complexity Low_complexity 1 64 0 2360 206 18 46 chr5 77367106 77367953 -125717579 - L1PB4 LINE L1 -613 5543 4731 1243 158 33 86 chr5 77367946 77368282 -125717250 + L1PB4 LINE L1 5538 5855 -301 * 818 233 11 0 chr5 77368297 77368473 -125717059 - MSTD LTR MaLR 0 396 219 24 32 0 0 chr5 77368637 77368668 -125716864 + AT_rich Low_complexity Low_complexity 1 31 0 829 202 26 16 chr5 77370101 77370294 -125715238 - L1MA7 LINE L1 -166 6125 5931 658 176 53 35 chr5 77370291 77370461 -125715071 + L1MA7 LINE L1 6119 6291 0 * 1317 230 39 17 chr5 77370684 77371041 -125714491 - MLT1A1 LTR MaLR 0 365 1 1946 203 22 20 chr5 77371041 77371450 -125714082 - MLT1A1-int LTR MaLR 0 1735 1326 2266 230 72 30 chr5 77371794 77372553 -125712979 - MLT1A1-int LTR MaLR -488 883 1 1198 220 31 59 chr5 77372564 77372919 -125712613 - MLT1A1 LTR MaLR -11 354 10 666 156 136 13 chr5 77374279 77374433 -125711099 - Tigger7 DNA MER2_type -2 2485 2313 544 126 81 36 chr5 77374695 77374806 -125710726 - Tigger7 DNA MER2_type -163 2324 2209 573 234 110 7 chr5 77374825 77374970 -125710562 - Tigger7 DNA MER2_type -545 160 1 24 0 0 0 chr5 77375982 77376006 -125709526 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr5 77376068 77376100 -125709432 + AT_rich Low_complexity Low_complexity 1 32 0 5052 122 26 5 chr5 77376215 77377016 -125708516 - L1MA3 LINE L1 -35 6270 5453 252 370 19 9 chr5 77377134 77377242 -125708290 - L2 LINE L2 -6 3307 3199 1518 163 40 72 chr5 77377387 77377761 -125707771 + THE1B LTR MaLR 1 362 -2 1646 224 176 24 chr5 77378370 77378965 -125706567 + MER76 LTR ERV 1 686 -2 230 368 0 0 chr5 77379072 77379140 -125706392 - L2 LINE L2 -67 3205 3138 181 382 22 22 chr5 77379235 77379371 -125706161 - L2 LINE L2 -196 3076 2941 332 48 63 0 chr5 77379430 77379493 -125706039 + (TA)n Simple_repeat Simple_repeat 2 68 0 300 330 35 4 chr5 77379681 77379842 -125705690 + L1ME LINE L1 5649 5811 -310 1878 134 46 0 chr5 77380678 77380802 -125704730 + AluSx SINE Alu 1 118 -194 207 0 0 0 chr5 77380802 77380825 -125704707 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1878 134 46 0 chr5 77380825 77380983 -125704549 + AluSx SINE Alu 118 296 -16 234 136 0 0 chr5 77381552 77381596 -125703936 + (TC)n Simple_repeat Simple_repeat 1 44 0 1085 220 43 24 chr5 77382663 77383103 -125702429 + MLT1D LTR MaLR 1 505 0 312 27 0 0 chr5 77383107 77383144 -125702388 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 263 0 0 chr5 77383335 77383411 -125702121 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 1996 123 52 30 chr5 77383634 77384001 -125701531 + THE1C LTR MaLR 1 375 0 449 256 16 8 chr5 77384518 77384639 -125700893 - MER45A DNA AcHobo 0 178 57 236 277 0 60 chr5 77384794 77384877 -125700655 - MIR3 SINE MIR -17 191 114 23 0 0 0 chr5 77385266 77385289 -125700243 + AT_rich Low_complexity Low_complexity 1 23 0 2718 255 81 33 chr5 77385755 77385880 -125699652 + L1MDa LINE L1 1027 1145 -5395 2220 119 6 3 chr5 77385880 77386191 -125699341 + AluSx SINE Alu 1 312 0 2718 255 81 33 chr5 77386191 77387338 -125698194 + L1MDa LINE L1 1145 2360 -4180 1249 181 31 22 chr5 77387355 77387582 -125697950 + Tigger3(Golem) DNA MER2_type 1 229 -2800 1988 156 27 24 chr5 77387582 77387954 -125697578 + THE1C LTR MaLR 1 373 -2 8578 141 74 20 chr5 77387956 77389455 -125696077 + THE1C-int LTR MaLR 1 1580 0 2051 166 11 24 chr5 77389455 77389835 -125695697 + THE1C LTR MaLR 1 375 0 503 183 17 0 chr5 77389835 77389950 -125695582 + Tigger3(Golem) DNA MER2_type 225 341 -2688 2088 69 0 0 chr5 77389952 77390212 -125695320 + AluY SINE Alu 47 306 -5 187 228 53 35 chr5 77390358 77390415 -125695117 - L2 LINE L2 -69 3244 3187 1301 134 21 21 chr5 77390974 77391213 -125694319 - L1MA8 LINE L1 -3 6288 6050 21 0 0 0 chr5 77391414 77391435 -125694097 + AT_rich Low_complexity Low_complexity 1 21 0 384 315 89 21 chr5 77391575 77391810 -125693722 - MIR SINE MIR 0 262 12 198 107 0 0 chr5 77391854 77391882 -125693650 - L2 LINE L2 -2769 545 518 649 185 8 31 chr5 77392126 77392256 -125693276 + FLAM_C SINE Alu 1 127 -16 255 294 129 22 chr5 77392259 77392531 -125693001 - L2 LINE L2 -1152 2162 1862 339 274 75 27 chr5 77392665 77392811 -125692721 - L2 LINE L2 0 3313 3161 2249 166 19 87 chr5 77392942 77393102 -125692430 + L1PA16 LINE L1 5631 5800 -366 2061 114 0 7 chr5 77393102 77393392 -125692140 + AluSx SINE Alu 1 288 -24 2249 166 19 87 chr5 77393392 77393772 -125691760 + L1PA16 LINE L1 5800 6134 -32 372 248 162 10 chr5 77393822 77394072 -125691460 - L2 LINE L2 -283 3030 2749 23 0 0 0 chr5 77395253 77395276 -125690256 + AT_rich Low_complexity Low_complexity 1 23 0 264 340 93 46 chr5 77396427 77396686 -125688846 - MLT1J LTR MaLR -9 502 232 1286 124 38 0 chr5 77396729 77396938 -125688594 + L1PA15 LINE L1 5942 6158 -7 208 255 0 0 chr5 77397409 77397460 -125688072 + MIR SINE MIR 91 141 -121 744 184 0 27 chr5 77398180 77398327 -125687205 + FLAM_C SINE Alu 1 143 0 257 253 343 6 chr5 77398484 77398650 -125686882 - MIR SINE MIR -40 222 1 21 0 0 0 chr5 77400081 77400102 -125685430 + AT_rich Low_complexity Low_complexity 1 21 0 216 361 21 10 chr5 77401230 77401327 -125684205 + MIR SINE MIR 38 135 -73 571 344 16 6 chr5 77401846 77402029 -125683503 + MIR3 SINE MIR 20 204 -4 1505 122 16 33 chr5 77403151 77403453 -125682079 - LTR12 LTR ERV1 0 714 349 268 291 169 38 chr5 77405162 77405423 -125680109 + MLT1J LTR MaLR 7 301 -210 324 119 0 60 chr5 77405587 77405654 -125679878 - MADE1 DNA Mariner -17 63 1 1299 210 53 11 chr5 77406966 77407247 -125678285 + AluJo SINE Alu 1 293 -19 28 48 0 0 chr5 77408392 77408434 -125677098 + AT_rich Low_complexity Low_complexity 1 42 0 2054 122 7 0 chr5 77408789 77409083 -125676449 + AluSq SINE Alu 3 298 -15 708 92 17 8 chr5 77409083 77409203 -125676329 + (TA)n Simple_repeat Simple_repeat 2 122 0 396 262 0 0 chr5 77409549 77409633 -125675899 - Tigger3(Golem) DNA MER2_type -1 3028 2945 450 258 0 0 chr5 77409646 77409743 -125675789 - Tigger3(Golem) DNA MER2_type -2931 98 2 6901 26 0 0 chr5 77409913 77411074 -125674458 - L1PA3 LINE L1 -434 5721 4561 3576 39 0 0 chr5 77411074 77411504 -125674028 + L1PA3 LINE L1 5721 6152 -3 29 0 0 0 chr5 77411657 77411686 -125673846 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr5 77412013 77412064 -125673468 + AT_rich Low_complexity Low_complexity 1 51 0 519 342 26 0 chr5 77413439 77413673 -125671859 + LTR16A LTR ERVL 27 266 -184 374 69 17 0 chr5 77413976 77414034 -125671498 + (TG)n Simple_repeat Simple_repeat 1 59 0 308 254 0 162 chr5 77414546 77414719 -125670813 + L2 LINE L2 3165 3309 -4 1178 115 0 0 chr5 77415395 77415551 -125669981 - AluSg/x SINE Alu -18 292 137 417 161 92 23 chr5 77415551 77415638 -125669894 + AluSg/x SINE Alu 194 286 -23 245 184 0 20 chr5 77415985 77416034 -125669498 - AluSg/x SINE Alu -169 133 86 1151 143 5 35 chr5 77416034 77416237 -125669295 - AluJo SINE Alu -92 220 24 948 191 77 0 chr5 77416896 77416961 -125668571 - MER3 DNA MER1_type 0 209 150 2459 66 0 7 chr5 77416961 77417265 -125668267 + AluY SINE Alu 1 302 -9 948 191 77 0 chr5 77417265 77417393 -125668139 - MER3 DNA MER1_type -59 150 1 1603 209 13 61 chr5 77417413 77417481 -125668051 - MLT1A2 LTR MaLR 0 374 304 2003 152 30 0 chr5 77417481 77417784 -125667748 + AluSx SINE Alu 1 312 0 1603 209 13 61 chr5 77417784 77418063 -125667469 - MLT1A2 LTR MaLR -70 304 46 2442 68 3 13 chr5 77418063 77418370 -125667162 - AluY SINE Alu -7 304 1 1603 209 13 61 chr5 77418370 77418414 -125667118 - MLT1A2 LTR MaLR -328 46 1 23 33 0 0 chr5 77418645 77418675 -125666857 + AT_rich Low_complexity Low_complexity 1 30 0 1266 127 91 0 chr5 77418691 77418912 -125666620 - L1MA6 LINE L1 -4 6296 6056 1719 157 80 0 chr5 77418912 77419212 -125666320 - MER2 DNA MER2_type -21 324 1 279 231 115 19 chr5 77419218 77419322 -125666210 - L2 LINE L2 -96 3217 3104 21 0 0 0 chr5 77419758 77419779 -125665753 + AT_rich Low_complexity Low_complexity 1 21 0 623 154 0 0 chr5 77422218 77422322 -125663210 + AluSp/q SINE Alu 210 313 0 703 192 15 0 chr5 77422322 77422452 -125663080 + AluJ SINE Alu 1 132 -170 1264 128 49 5 chr5 77422461 77422664 -125662868 - THE1B LTR MaLR -150 214 3 7879 113 74 11 chr5 77422671 77423861 -125661671 - THE1B-int LTR MaLR -6 1574 310 1083 163 11 0 chr5 77423871 77424049 -125661483 + AluJ SINE Alu 129 308 -4 918 134 14 7 chr5 77424087 77424229 -125661303 + BC200 scRNA scRNA 1 143 -57 1595 206 3 3 chr5 77424341 77424633 -125660899 - AluJo SINE Alu -17 295 4 2654 61 3 0 chr5 77424756 77425066 -125660466 + AluSp SINE Alu 2 312 -1 1163 275 59 21 chr5 77425094 77425570 -125659962 + L1ME3A LINE L1 5458 5951 -219 2105 118 13 7 chr5 77425714 77426018 -125659514 - AluSx SINE Alu -6 306 1 1840 138 3 43 chr5 77426196 77426500 -125659032 + AluJo SINE Alu 1 292 -20 2350 86 0 7 chr5 77426507 77426810 -125658722 + AluSx SINE Alu 1 301 -11 1124 237 87 70 chr5 77427244 77427772 -125657760 + HAL1 LINE L1 1398 1934 -573 2208 129 0 3 chr5 77427790 77428092 -125657440 + AluSx SINE Alu 1 301 -11 232 156 195 39 chr5 77428099 77428176 -125657356 + L1MB5 LINE L1 5463 5551 -629 * 873 197 10 40 chr5 77428167 77428365 -125657167 + L1MB5 LINE L1 5903 6094 -80 2861 184 19 43 chr5 77428365 77428438 -125657094 + L1MB5 LINE L1 5535 5608 -566 2162 111 30 3 chr5 77428438 77428736 -125656796 + AluSx SINE Alu 1 306 -6 2861 184 19 43 chr5 77428736 77429281 -125656251 + L1MB5 LINE L1 5608 6140 -34 1747 175 7 10 chr5 77429281 77429589 -125655943 + AluJo SINE Alu 2 308 -4 2861 184 19 43 chr5 77429589 77429614 -125655918 + L1MB5 LINE L1 6140 6164 -10 486 295 27 42 chr5 77429618 77429879 -125655653 + HAL1 LINE L1 2012 2268 -239 2317 106 0 0 chr5 77430412 77430713 -125654819 + AluSq SINE Alu 1 301 -12 348 224 84 9 chr5 77430713 77430820 -125654712 + L2 LINE L2 3199 3313 0 705 201 27 134 chr5 77431655 77431816 -125653716 + MLT1J LTR MaLR 1 134 -377 2338 87 0 3 chr5 77431816 77432145 -125653387 - AluSq SINE Alu 0 328 1 705 201 27 134 chr5 77432145 77432206 -125653326 + MLT1J LTR MaLR 134 200 -311 922 175 62 0 chr5 77432397 77432557 -125652975 + AluJb SINE Alu 137 306 -6 1892 115 61 17 chr5 77432583 77432878 -125652654 + AluY SINE Alu 1 308 -3 1872 90 34 93 chr5 77433473 77433686 -125651846 - AluSx SINE Alu -9 303 114 2469 76 0 25 chr5 77433686 77434002 -125651530 - AluY SINE Alu -3 308 1 1872 90 34 93 chr5 77434002 77434110 -125651422 - AluSx SINE Alu -198 114 1 327 49 0 0 chr5 77434276 77434317 -125651215 + (CA)n Simple_repeat Simple_repeat 2 42 0 225 157 14 86 chr5 77434497 77434567 -125650965 + MLT1K LTR MaLR 44 108 -480 328 227 0 13 chr5 77434580 77434655 -125650877 + MLT1K LTR MaLR 487 560 -28 26 0 0 0 chr5 77435140 77435166 -125650366 + AT_rich Low_complexity Low_complexity 1 26 0 1465 147 0 4 chr5 77435554 77435785 -125649747 + AluJb SINE Alu 71 300 -12 2409 92 0 0 chr5 77435856 77436159 -125649373 + AluSg SINE Alu 1 303 -7 2192 133 0 0 chr5 77436288 77436596 -125648936 + AluSx SINE Alu 1 308 -4 217 139 76 13 chr5 77437651 77437730 -125647802 + CT-rich Low_complexity Low_complexity 2 85 0 557 212 0 8 chr5 77437737 77437855 -125647677 - AluJb SINE Alu -195 117 1 246 296 19 46 chr5 77438291 77438399 -125647133 + MER91C DNA MER1_type 36 140 0 223 286 39 0 chr5 77438634 77438711 -125646821 + CT-rich Low_complexity Low_complexity 3 82 0 1578 101 5 0 chr5 77438994 77439201 -125646331 - AluSx SINE Alu -16 294 87 201 118 59 0 chr5 77439203 77439254 -125646278 + GA-rich Low_complexity Low_complexity 3 56 0 569 127 0 0 chr5 77439268 77439347 -125646185 - AluSx SINE Alu -233 80 2 2282 102 0 10 chr5 77439348 77439653 -125645879 - AluSx SINE Alu -10 302 1 2032 132 13 3 chr5 77439806 77440109 -125645423 + AluSx SINE Alu 1 306 -6 666 270 10 29 chr5 77440112 77440316 -125645216 + L1MC5 LINE L1 7311 7510 -451 1852 147 0 82 chr5 77440325 77440665 -125644867 + AluJb SINE Alu 1 312 0 1499 175 20 4 chr5 77440676 77440922 -125644610 + AluJb SINE Alu 1 250 -62 1214 103 0 103 chr5 77441058 77441252 -125644280 + AluSx SINE Alu 4 177 -135 1941 120 56 11 chr5 77441252 77441536 -125643996 + AluSg SINE Alu 1 297 -13 1553 158 0 55 chr5 77441536 77441583 -125643949 - L1MB8 LINE L1 -22 6156 6108 1587 162 13 52 chr5 77441583 77441891 -125643641 + AluJo SINE Alu 5 300 -12 1553 158 0 55 chr5 77441891 77442154 -125643378 - L1MB8 LINE L1 -70 6108 5863 878 138 27 98 chr5 77442209 77442419 -125643113 - L1MB8 LINE L1 -324 5860 5665 1575 139 65 81 chr5 77442419 77442728 -125642804 - AluJb SINE Alu -8 304 1 878 138 27 98 chr5 77442728 77442742 -125642790 - L1MB8 LINE L1 -519 5665 5652 732 130 0 0 chr5 77443035 77443135 -125642397 + AluJ/FLAM SINE Alu 3 102 -210 2280 95 0 3 chr5 77443135 77443419 -125642113 - AluSx SINE Alu -29 283 1 894 177 0 66 chr5 77443420 77443601 -125641931 - FRAM SINE Alu -7 169 1 285 367 23 34 chr5 77443736 77443913 -125641619 - HUERS-P3 LTR ERV1 -3217 974 800 2070 116 23 10 chr5 77444659 77444961 -125640571 + AluSx SINE Alu 1 306 -6 1875 141 3 30 chr5 77444966 77445271 -125640261 + AluJb SINE Alu 1 297 -15 607 188 128 0 chr5 77445649 77445766 -125639766 + FLAM_A SINE Alu 1 132 -1 180 250 0 0 chr5 77446000 77446040 -125639492 + MIR3 SINE MIR 160 199 -9 213 258 15 15 chr5 77446077 77446143 -125639389 - MIR SINE MIR -195 67 2 980 196 0 0 chr5 77446501 77446669 -125638863 - FRAM SINE Alu -8 168 1 658 276 145 21 chr5 77446773 77446998 -125638534 - HAL1 LINE L1 -1114 1393 1197 1745 143 7 18 chr5 77446998 77447278 -125638254 - AluJb SINE Alu -35 277 1 658 276 145 21 chr5 77447278 77447582 -125637950 - HAL1 LINE L1 -1310 1197 798 1795 177 10 0 chr5 77447719 77448019 -125637513 - AluJb SINE Alu -9 303 1 869 233 68 38 chr5 77448684 77448950 -125636582 - MER21B LTR ERV1 -58 805 532 1306 167 25 8 chr5 77448965 77449210 -125636322 - LTR9 LTR ERV1 -80 532 284 3085 171 23 28 chr5 77449210 77449931 -125635601 - HUERS-P3 LTR ERV1 -6749 692 3 764 141 47 47 chr5 77449933 77450103 -125635429 - LTR9 LTR ERV1 0 612 443 1771 241 75 35 chr5 77450109 77450616 -125634916 - MER21B LTR ERV1 -318 545 19 467 191 22 11 chr5 77450638 77450727 -125634805 - MER21B LTR ERV1 -773 90 1 485 220 45 15 chr5 77450735 77450867 -125634665 - MIR SINE MIR -24 238 103 2280 102 0 0 chr5 77450929 77451224 -125634308 - AluSc SINE Alu -14 295 1 485 302 19 28 chr5 77451802 77452017 -125633515 - L1M4 LINE L1 -1968 4178 3966 1117 224 43 18 chr5 77452174 77452224 -125633308 - L1M4 LINE L1 -758 5388 5341 2475 74 0 7 chr5 77452224 77452523 -125633009 - AluSg SINE Alu -13 297 1 1117 224 43 18 chr5 77452523 77452798 -125632734 - L1M4 LINE L1 -805 5341 5055 2138 207 86 44 chr5 77452819 77453472 -125632060 + L1ME1 LINE L1 5483 6162 -4 2674 32 0 19 chr5 77453543 77453855 -125631677 + AluY SINE Alu 1 306 -5 184 300 0 0 chr5 77454444 77454494 -125631038 - MER5A DNA MER1_type -87 102 53 884 148 13 127 chr5 77455424 77455661 -125629871 - MER2 DNA MER2_type -135 210 1 182 254 132 53 chr5 77456294 77456408 -125629124 + L2 LINE L2 3158 3280 -33 219 170 0 0 chr5 77457896 77457943 -125627589 + (TA)n Simple_repeat Simple_repeat 1 47 0 2845 16 0 0 chr5 77458600 77458908 -125626624 + AluYa5 SINE Alu 1 308 -3 30 0 0 0 chr5 77459043 77459073 -125626459 + AT_rich Low_complexity Low_complexity 1 30 0 200 227 0 0 chr5 77459576 77459620 -125625912 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 82 0 0 chr5 77460080 77460129 -125625403 + AT_rich Low_complexity Low_complexity 1 49 0 1286 212 4 11 chr5 77460278 77460547 -125624985 + AluJo SINE Alu 22 288 -24 346 299 96 46 chr5 77460870 77461194 -125624338 + L1MCa LINE L1 1093 1432 -4994 506 209 0 9 chr5 77461283 77461393 -125624139 + L1M4 LINE L1 4108 4216 -1930 22 0 0 0 chr5 77461472 77461494 -125624038 + AT_rich Low_complexity Low_complexity 1 22 0 872 185 80 30 chr5 77461590 77461790 -125623742 - LTR57 LTR ERVL 0 411 202 995 46 0 8 chr5 77461790 77461920 -125623612 + (TTTCC)n Simple_repeat Simple_repeat 2 130 0 452 144 18 54 chr5 77461920 77462031 -125623501 - Alu SINE Alu -14 296 190 205 227 0 30 chr5 77462431 77462497 -125623035 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 621 227 168 65 chr5 77463985 77464324 -125621208 + MLT1A2 LTR MaLR 1 374 0 219 182 36 0 chr5 77464712 77464767 -125620765 + (AGTAG)n Simple_repeat Simple_repeat 4 60 0 267 101 93 0 chr5 77464859 77464914 -125620618 + HERVK3 LTR ERVK 150 221 -7022 580 249 99 15 chr5 77464978 77465179 -125620353 + HERVK3 LTR ERVK 55 272 -6971 4638 164 32 43 chr5 77465321 77466670 -125618862 + HERVK3 LTR ERVK 1321 5561 -384 728 163 22 7 chr5 77466670 77466805 -125618727 + LTR3b LTR ERVK 317 453 -47 6201 59 0 0 chr5 77467530 77468290 -125617242 - L1PA6 LINE L1 -2 6152 5393 215 279 13 51 chr5 77469243 77469322 -125616210 - MER91C DNA MER1_type -11 129 54 1424 216 0 0 chr5 77469468 77469727 -125615805 - AluSq SINE Alu -54 259 1 267 270 27 0 chr5 77470220 77470294 -125615238 + MLT1J2 LTR MaLR 1 76 -374 529 267 82 31 chr5 77470384 77470579 -125614953 + MLT1J2 LTR MaLR 240 444 -6 2027 53 0 4 chr5 77471522 77471765 -125613767 - AluY SINE Alu -69 242 1 1101 204 24 0 chr5 77471766 77471972 -125613560 - LTR57 LTR ERVL -200 211 1 551 287 116 31 chr5 77471972 77472327 -125613205 + L1ME1 LINE L1 4337 4721 -1425 373 114 45 11 chr5 77472332 77472420 -125613112 + (TA)n Simple_repeat Simple_repeat 1 91 0 948 281 71 23 chr5 77472458 77472850 -125612682 + L1ME1 LINE L1 5751 6161 -5 2247 103 0 6 chr5 77473165 77473476 -125612056 - AluSg SINE Alu -1 309 1 22 70 0 0 chr5 77473793 77473836 -125611696 + AT_rich Low_complexity Low_complexity 1 43 0 221 307 68 23 chr5 77475173 77475261 -125610271 + MER5B DNA MER1_type 52 143 -35 2467 70 0 0 chr5 77475347 77475649 -125609883 - L1PA5 LINE L1 0 6154 5853 2205 38 0 4 chr5 77475649 77475912 -125609620 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 77475918 77475940 -125609592 + AT_rich Low_complexity Low_complexity 1 22 0 208 167 24 0 chr5 77476161 77476203 -125609329 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 929 309 60 19 chr5 77476276 77476706 -125608826 + MLT1J LTR MaLR 4 451 -60 205 271 14 43 chr5 77476708 77476778 -125608754 + MER5B DNA MER1_type 3 70 -108 2005 141 7 0 chr5 77477275 77477574 -125607958 - AluSx SINE Alu -11 301 1 28 91 0 0 chr5 77477665 77477742 -125607790 + AT_rich Low_complexity Low_complexity 1 77 0 1164 248 133 41 chr5 77479141 77479659 -125605873 - MLT1F1 LTR MaLR -2 565 3 248 306 72 9 chr5 77479712 77479823 -125605709 + L2 LINE L2 854 971 -2343 333 236 166 57 chr5 77479875 77480032 -125605500 - MER5B DNA MER1_type 0 178 5 804 240 55 10 chr5 77480091 77480291 -125605241 + MER58A DNA MER1_type 4 212 -12 261 83 0 0 chr5 77480329 77480365 -125605167 + (TC)n Simple_repeat Simple_repeat 1 36 0 230 348 35 17 chr5 77481027 77481142 -125604390 - HAL1 LINE L1 -2043 464 348 456 204 83 39 chr5 77481290 77481469 -125604063 - MER31B LTR ERV1 0 485 286 387 88 6 147 chr5 77481590 77481760 -125603772 + L1P LINE L1 2997 3142 -3004 1219 113 0 103 chr5 77486376 77486705 -125598827 - AluSx SINE Alu -17 295 1 1089 64 26 6 chr5 77488190 77488346 -125597186 - L1P1 LINE L1 -583 5572 5414 * 6488 44 29 1 chr5 77488335 77489192 -125596340 + L1P LINE L1 4090 4970 -1176 2110 121 60 30 chr5 77491629 77491993 -125593539 - THE1C LTR MaLR 0 375 1 222 243 43 14 chr5 77492210 77492280 -125593252 + (CATATA)n Simple_repeat Simple_repeat 2 73 0 359 346 56 25 chr5 77493928 77494214 -125591318 - L2 LINE L2 -1042 2272 1978 425 276 55 7 chr5 77495396 77495541 -125589991 + MLT1F1 LTR MaLR 16 167 -400 316 171 159 11 chr5 77495746 77495834 -125589698 + MLT1A1 LTR MaLR 43 143 -222 1841 125 17 27 chr5 77495857 77496153 -125589379 - AluSg SINE Alu -3 307 15 419 321 124 21 chr5 77496394 77496814 -125588718 - L1 LINE L1 -2799 3347 2885 511 310 57 9 chr5 77498124 77498353 -125587179 + LTR16A LTR ERVL 27 266 -184 358 53 35 0 chr5 77498654 77498711 -125586821 + (TG)n Simple_repeat Simple_repeat 1 59 0 441 132 0 0 chr5 77550493 77550561 -125534971 + AluS SINE Alu 232 299 -11 183 368 23 77 chr5 77550609 77550870 -125534662 - L2 LINE L2 -33 3239 2993 1583 146 97 0 chr5 77550887 77551155 -125534377 + AluJo SINE Alu 12 305 -7 843 146 0 8 chr5 77551160 77551290 -125534242 + FLAM_C SINE Alu 7 135 -8 1738 179 3 3 chr5 77551528 77551825 -125533707 + AluJo SINE Alu 1 297 -15 1178 171 127 28 chr5 77552365 77552617 -125532915 + AluJo SINE Alu 24 300 -12 440 184 82 20 chr5 77552955 77553053 -125532479 - AluSg/x SINE Alu -12 297 194 1260 129 0 0 chr5 77553053 77553224 -125532308 + AluSg/x SINE Alu 137 307 -3 1928 171 10 10 chr5 77553234 77553543 -125531989 + AluJo SINE Alu 1 309 -3 213 284 98 39 chr5 77553543 77553645 -125531887 + MER5B DNA MER1_type 63 170 -8 * 263 211 0 0 chr5 77553637 77553694 -125531838 + MIR3 SINE MIR 147 203 -5 842 102 0 0 chr5 77553852 77553970 -125531562 + FLAM_C SINE Alu 1 118 -15 2136 142 3 0 chr5 77554290 77554645 -125530887 + AluSx SINE Alu 1 356 0 1617 167 43 46 chr5 77555043 77555166 -125530366 + AluJo SINE Alu 2 124 -188 1873 119 17 34 chr5 77555166 77555461 -125530071 + AluSg SINE Alu 1 290 -20 1617 167 43 46 chr5 77555461 77555642 -125529890 + AluJo SINE Alu 124 305 -7 222 276 181 9 chr5 77555712 77555817 -125529715 - L2 LINE L2 -212 3060 2938 198 0 0 0 chr5 77555867 77555889 -125529643 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1915 125 7 24 chr5 77555891 77556178 -125529354 - AluSx SINE Alu -30 282 1 1583 154 39 57 chr5 77557003 77557131 -125528401 + AluJo SINE Alu 1 130 -182 2030 135 10 0 chr5 77557131 77557420 -125528112 - AluSx SINE Alu -20 292 1 1583 154 39 57 chr5 77557420 77557571 -125527961 + AluJo SINE Alu 130 275 -37 303 93 0 0 chr5 77557578 77557621 -125527911 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2318 108 0 0 chr5 77558066 77558363 -125527169 - AluSg SINE Alu -13 297 1 1953 126 7 0 chr5 77558405 77558676 -125526856 - AluSx SINE Alu -1 311 39 1467 109 23 0 chr5 77559197 77559516 -125526016 + L1P4 LINE L1 5161 5485 -676 2284 101 0 7 chr5 77559517 77559815 -125525717 + AluSx SINE Alu 2 297 -15 2010 223 79 45 chr5 77560037 77560146 -125525386 + MER82 DNA MER2_type 79 183 -470 2121 118 0 59 chr5 77560146 77560467 -125525065 + AluSx SINE Alu 1 302 -10 2010 223 79 45 chr5 77560467 77560913 -125524619 + MER82 DNA MER2_type 183 653 0 979 157 16 54 chr5 77561571 77561756 -125523776 - FAM SINE Alu 0 49 1 446 244 50 8 chr5 77561817 77561936 -125523596 + MLT1G1 LTR MaLR 16 139 -456 2224 123 25 6 chr5 77562035 77562392 -125523140 + THE1B LTR MaLR 1 364 0 9403 101 60 47 chr5 77562393 77563946 -125521586 + THE1B-int LTR MaLR 2 1574 -6 1208 128 49 5 chr5 77563953 77564156 -125521376 + THE1B LTR MaLR 3 214 -150 682 192 15 0 chr5 77564165 77564295 -125521237 - FLAM_C SINE Alu -1 132 1 596 154 0 0 chr5 77564295 77564399 -125521133 - AluSp/q SINE Alu 0 313 210 21 0 0 0 chr5 77569268 77569289 -125516243 + AT_rich Low_complexity Low_complexity 1 21 0 268 240 115 19 chr5 77569725 77569829 -125515703 + L2 LINE L2 3104 3217 -96 1719 157 80 0 chr5 77569835 77570135 -125515397 + MER2 DNA MER2_type 1 324 -21 1266 127 91 0 chr5 77570135 77570356 -125515176 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 77570372 77570402 -125515130 + AT_rich Low_complexity Low_complexity 1 30 0 1627 210 13 56 chr5 77570633 77570677 -125514855 + MLT1A2 LTR MaLR 1 45 -329 2444 66 3 13 chr5 77570677 77570981 -125514551 + AluY SINE Alu 1 301 -10 1627 210 13 56 chr5 77570981 77571258 -125514274 + MLT1A2 LTR MaLR 45 305 -69 2003 152 30 0 chr5 77571258 77571561 -125513971 - AluSx SINE Alu 0 312 1 1627 210 13 56 chr5 77571561 77571629 -125513903 + MLT1A2 LTR MaLR 305 374 0 948 191 77 0 chr5 77571649 77571777 -125513755 + MER3 DNA MER1_type 1 150 -59 2428 69 0 7 chr5 77571777 77572081 -125513451 - AluY SINE Alu -9 302 1 948 191 77 0 chr5 77572081 77572146 -125513386 + MER3 DNA MER1_type 150 209 0 1151 143 5 35 chr5 77572805 77573008 -125512524 + AluJo SINE Alu 24 220 -92 257 163 0 20 chr5 77573008 77573057 -125512475 + FLAM SINE Alu 86 133 0 458 184 82 20 chr5 77573395 77573493 -125512039 - AluSg/x SINE Alu -12 298 195 1239 129 0 0 chr5 77573493 77573664 -125511868 + AluSg/x SINE Alu 139 309 -3 1865 165 10 13 chr5 77573674 77573983 -125511549 + AluJo SINE Alu 1 308 -4 193 324 88 29 chr5 77573983 77574085 -125511447 + MER5B DNA MER1_type 63 170 -8 * 251 211 0 0 chr5 77574077 77574134 -125511398 + MIR3 SINE MIR 147 203 -5 863 102 0 0 chr5 77574292 77574410 -125511122 + FLAM_C SINE Alu 1 118 -15 2084 142 3 0 chr5 77574730 77575085 -125510447 + AluSx SINE Alu 1 356 0 1560 167 43 46 chr5 77575483 77575606 -125509926 + AluJo SINE Alu 2 124 -188 1847 119 17 34 chr5 77575606 77575901 -125509631 + AluSg SINE Alu 1 290 -20 1560 167 43 46 chr5 77575901 77576082 -125509450 + AluJo SINE Alu 124 305 -7 206 257 191 19 chr5 77576152 77576257 -125509275 - L2 LINE L2 -212 3060 2938 198 0 0 0 chr5 77576307 77576329 -125509203 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1894 125 7 24 chr5 77576331 77576618 -125508914 - AluSx SINE Alu -30 282 1 1533 157 39 57 chr5 77577443 77577571 -125507961 + AluJo SINE Alu 1 130 -182 1990 138 10 0 chr5 77577571 77577861 -125507671 - AluSx SINE Alu -19 293 1 1533 157 39 57 chr5 77577861 77578012 -125507520 + AluJo SINE Alu 130 275 -37 303 93 0 0 chr5 77578019 77578062 -125507470 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2311 104 0 0 chr5 77578507 77578804 -125506728 - AluSg SINE Alu -13 297 1 1809 131 8 8 chr5 77578838 77579106 -125506426 - AluSx SINE Alu -6 306 39 1558 109 23 0 chr5 77579627 77579946 -125505586 + L1P4 LINE L1 5161 5485 -676 2256 101 0 7 chr5 77579947 77580245 -125505287 + AluSx SINE Alu 2 297 -15 2067 216 78 65 chr5 77580466 77580575 -125504957 + MER82 DNA MER2_type 79 185 -468 2089 110 0 58 chr5 77580575 77580883 -125504649 + AluSx SINE Alu 1 290 -22 2067 216 78 65 chr5 77580883 77581341 -125504191 + MER82 DNA MER2_type 185 653 0 957 157 16 54 chr5 77581999 77582184 -125503348 - FAM SINE Alu 0 49 1 400 261 50 8 chr5 77582245 77582364 -125503168 + MLT1G1 LTR MaLR 16 139 -456 2328 123 25 6 chr5 77582463 77582820 -125502712 + THE1B LTR MaLR 1 364 0 9850 101 60 47 chr5 77582821 77584374 -125501158 + THE1B-int LTR MaLR 2 1574 -6 1264 128 49 5 chr5 77584381 77584584 -125500948 + THE1B LTR MaLR 3 214 -150 703 192 15 0 chr5 77584593 77584723 -125500809 - FLAM_C SINE Alu -1 132 1 623 154 0 0 chr5 77584723 77584827 -125500705 - AluSp/q SINE Alu 0 313 210 21 0 0 0 chr5 77589702 77589723 -125495809 + AT_rich Low_complexity Low_complexity 1 21 0 268 240 115 19 chr5 77590159 77590263 -125495269 + L2 LINE L2 3104 3217 -96 1719 157 80 0 chr5 77590269 77590569 -125494963 + MER2 DNA MER2_type 1 324 -21 1238 131 91 0 chr5 77590569 77590790 -125494742 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 77590806 77590836 -125494696 + AT_rich Low_complexity Low_complexity 1 30 0 1627 210 13 56 chr5 77591067 77591111 -125494421 + MLT1A2 LTR MaLR 1 45 -329 2453 66 3 13 chr5 77591111 77591416 -125494116 + AluY SINE Alu 1 302 -9 1627 210 13 56 chr5 77591416 77591693 -125493839 + MLT1A2 LTR MaLR 45 305 -69 1994 152 30 0 chr5 77591693 77591995 -125493537 - AluSx SINE Alu -1 311 1 1627 210 13 56 chr5 77591995 77592063 -125493469 + MLT1A2 LTR MaLR 305 374 0 954 191 77 0 chr5 77592083 77592211 -125493321 + MER3 DNA MER1_type 1 150 -59 2468 66 0 7 chr5 77592211 77592516 -125493016 - AluY SINE Alu -8 303 1 954 191 77 0 chr5 77592516 77592581 -125492951 + MER3 DNA MER1_type 150 209 0 656 208 106 51 chr5 77593079 77593279 -125492253 - MLT1F LTR MaLR 0 626 333 1423 187 40 49 chr5 77593279 77593511 -125492021 - MLT1A1 LTR MaLR 0 365 134 2059 120 0 28 chr5 77593511 77593843 -125491689 + AluSg SINE Alu 1 324 0 1423 187 40 49 chr5 77593843 77593935 -125491597 - MLT1A1 LTR MaLR -231 134 43 523 300 13 0 chr5 77594143 77594293 -125491239 - MLT1F LTR MaLR -400 167 16 298 378 34 21 chr5 77595519 77595810 -125489722 + L2 LINE L2 1978 2272 -1042 21 0 0 0 chr5 77596213 77596234 -125489298 + AT_rich Low_complexity Low_complexity 1 21 0 222 302 94 9 chr5 77596629 77596735 -125488797 + L2 LINE L2 3158 3272 0 30 0 0 0 chr5 77598014 77598044 -125487488 + AT_rich Low_complexity Low_complexity 1 30 0 274 273 0 0 chr5 77598399 77598487 -125487045 + MIR SINE MIR 100 187 -75 1884 219 14 68 chr5 77598565 77598966 -125486566 + L1M2 LINE L1 2528 2949 -3899 2222 128 0 0 chr5 77598966 77599272 -125486260 + AluSg SINE Alu 1 306 -4 1884 219 14 68 chr5 77599272 77599788 -125485744 + L1M2 LINE L1 2949 3392 -3456 2541 191 47 2 chr5 77599788 77600316 -125485216 + L1PB4 LINE L1 5604 6155 -1 3248 231 61 22 chr5 77600468 77600902 -125484630 + L1MC3 LINE L1 6147 6563 -1222 1896 172 123 5 chr5 77600902 77601285 -125484247 + MSTA LTR MaLR 1 428 0 3248 231 61 22 chr5 77601285 77601787 -125483745 + L1MC3 LINE L1 6563 7119 -666 586 211 34 46 chr5 77601851 77602026 -125483506 + MER104 DNA Tc2 7 179 -1 406 235 42 17 chr5 77603283 77603402 -125482130 + MER20 DNA MER1_type 91 212 -7 639 168 40 0 chr5 77603592 77603717 -125481815 + L1PA13 LINE L1 6033 6162 -1 26 30 0 0 chr5 77603783 77603816 -125481716 + AT_rich Low_complexity Low_complexity 1 33 0 28 0 0 0 chr5 77604377 77604405 -125481127 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 77605082 77605106 -125480426 + AT_rich Low_complexity Low_complexity 1 24 0 3667 28 9 2 chr5 77605675 77606107 -125479425 - L1PA3 LINE L1 0 6155 5721 7090 24 0 0 chr5 77606107 77607266 -125478266 + L1PA3 LINE L1 4563 5721 -434 441 258 0 0 chr5 77607436 77607533 -125477999 + Tigger3(Golem) DNA MER2_type 2 98 -2931 417 243 65 19 chr5 77607524 77607631 -125477901 + Tigger3(Golem) DNA MER2_type 2927 3038 0 * 198 0 0 0 chr5 77607978 77608000 -125477532 + (TA)n Simple_repeat Simple_repeat 1 22 0 312 297 0 11 chr5 77608012 77608103 -125477429 + L1MC4 LINE L1 6614 6703 -1339 * 333 244 0 35 chr5 77608026 77608112 -125477420 - L1MC4 LINE L1 -1347 6695 6613 234 0 0 0 chr5 77608113 77608139 -125477393 + (TG)n Simple_repeat Simple_repeat 1 26 0 1967 127 7 0 chr5 77608139 77608415 -125477117 - AluSq SINE Alu -33 280 3 28 48 0 0 chr5 77608770 77608812 -125476720 + AT_rich Low_complexity Low_complexity 1 42 0 1335 210 53 11 chr5 77609957 77610238 -125475294 - AluJo SINE Alu -19 293 1 330 119 0 60 chr5 77611550 77611617 -125473915 + MADE1 DNA Mariner 1 63 -17 263 291 169 38 chr5 77611781 77612042 -125473490 - MLT1J LTR MaLR -210 301 7 248 254 0 162 chr5 77614117 77614290 -125471242 - L2 LINE L2 -4 3309 3165 347 73 18 0 chr5 77614802 77614857 -125470675 + (CA)n Simple_repeat Simple_repeat 1 56 0 525 342 26 0 chr5 77615161 77615395 -125470137 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 77616770 77616821 -125468711 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 77617148 77617177 -125468355 + AT_rich Low_complexity Low_complexity 1 29 0 6134 36 0 1 chr5 77617329 77618069 -125467463 - L1PA3 LINE L1 -3 6152 5414 10707 35 0 0 chr5 77618069 77619372 -125466160 + L1PA3 LINE L1 4101 5403 -743 183 299 5 139 chr5 77619411 77619605 -125465927 + MIR SINE MIR 53 220 -42 229 370 102 14 chr5 77619907 77620123 -125465409 + L2 LINE L2 2029 2263 -1051 1001 153 98 86 chr5 77620906 77621161 -125464371 - Tigger2 DNA MER2_type -10 2708 2451 3749 186 38 0 chr5 77621215 77621945 -125463587 - Tigger2 DNA MER2_type -1959 759 2 1388 269 97 82 chr5 77622043 77623548 -125461984 + MER110-int LTR ERV1 1952 3590 -1057 761 236 56 14 chr5 77623755 77623971 -125461561 + MLT1D LTR MaLR 1 225 -280 289 170 0 0 chr5 77624012 77624059 -125461473 + MLT1A2 LTR MaLR 1 47 -327 363 309 0 0 chr5 77624106 77624216 -125461316 + MLT1A2 LTR MaLR 51 160 -214 960 180 11 26 chr5 77624290 77624479 -125461053 + MLT1A2 LTR MaLR 189 374 0 * 975 270 9 0 chr5 77624479 77624708 -125460824 + MLT1D LTR MaLR 275 505 0 662 199 112 23 chr5 77624846 77625066 -125460466 - MER33 DNA MER1_type -98 226 1 465 329 43 10 chr5 77625271 77625478 -125460054 + MER110 LTR ERV1 242 455 -36 1195 190 154 3 chr5 77625998 77626231 -125459301 + MER47A DNA MER2_type 1 292 -2031 12424 61 12 1 chr5 77626231 77628619 -125456913 - L1PA6 LINE L1 -4 6150 3742 1195 190 154 3 chr5 77628619 77628690 -125456842 + MER47A DNA MER2_type 292 351 -15 297 128 0 0 chr5 77628761 77628808 -125456724 + (CA)n Simple_repeat Simple_repeat 2 48 0 1788 144 158 13 chr5 77629580 77629954 -125455578 + MSTA LTR MaLR 1 428 0 8847 159 8 34 chr5 77629956 77631576 -125453956 + MSTA-int LTR MaLR 3 1580 0 1669 174 130 18 chr5 77631576 77631960 -125453572 + MSTA LTR MaLR 1 427 -1 1434 265 51 13 chr5 77632404 77632857 -125452675 - MLT1D LTR MaLR 0 505 36 295 328 9 17 chr5 77633125 77633241 -125452291 + MIR SINE MIR 124 238 -24 735 278 28 9 chr5 77634436 77634648 -125450884 + MER20 DNA MER1_type 2 217 -2 255 61 0 0 chr5 77634686 77634719 -125450813 + (T)n Simple_repeat Simple_repeat 1 33 0 246 335 126 33 chr5 77634986 77635168 -125450364 - MLT1J1 LTR MaLR 0 446 248 1033 110 7 0 chr5 77635409 77635554 -125449978 + AluSg/x SINE Alu 151 296 -16 1968 125 10 16 chr5 77635695 77636008 -125449524 - AluSq SINE Alu -2 311 1 22 56 0 0 chr5 77636532 77636568 -125448964 + AT_rich Low_complexity Low_complexity 1 36 0 404 362 68 10 chr5 77636701 77636908 -125448624 + L1PA16 LINE L1 792 1010 -6564 12102 241 27 21 chr5 77637032 77640763 -125444769 + L1PA16 LINE L1 2182 5888 -1716 1047 172 153 65 chr5 77640763 77641025 -125444507 + AluJo SINE Alu 2 286 -16 1017 75 0 19 chr5 77641025 77641185 -125444347 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 12102 241 27 21 chr5 77641185 77642012 -125443520 + L1PA16 LINE L1 5888 6775 -829 1781 79 19 92 chr5 77642012 77642327 -125443205 + L1PA10 LINE L1 5876 6167 -1 12102 241 27 21 chr5 77642327 77643058 -125442474 + L1PA16 LINE L1 6775 7500 -104 1988 194 97 44 chr5 77643456 77644580 -125440952 - pTR5 LTR ERV1 -259 2179 743 431 335 60 4 chr5 77644947 77645213 -125440319 - MER110 LTR ERV1 -26 465 185 266 224 19 112 chr5 77645286 77645393 -125440139 - MER110A LTR ERV1 -298 170 74 301 56 0 37 chr5 77645591 77645645 -125439887 + (TG)n Simple_repeat Simple_repeat 2 53 0 281 238 12 0 chr5 77646597 77646677 -125438855 + (TA)n Simple_repeat Simple_repeat 1 81 0 21 0 0 0 chr5 77647403 77647424 -125438108 + AT_rich Low_complexity Low_complexity 1 21 0 24 96 0 0 chr5 77647842 77647915 -125437617 + AT_rich Low_complexity Low_complexity 1 73 0 332 333 60 47 chr5 77649130 77649505 -125436027 + L1ME LINE L1 4348 4722 -1424 239 298 76 66 chr5 77649747 77650323 -125435209 + L1ME LINE L1 5340 5918 -252 408 319 108 32 chr5 77650498 77650777 -125434755 + L1MC/D LINE L1 5296 5595 -2213 333 68 0 0 chr5 77651383 77651427 -125434105 + (CA)n Simple_repeat Simple_repeat 1 44 0 237 215 15 15 chr5 77651434 77651499 -125434033 + (TA)n Simple_repeat Simple_repeat 2 66 0 189 0 0 0 chr5 77651519 77651540 -125433992 + (CA)n Simple_repeat Simple_repeat 2 22 0 1993 139 7 3 chr5 77651836 77652145 -125433387 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr5 77652691 77652714 -125432818 + AT_rich Low_complexity Low_complexity 1 23 0 1354 269 92 43 chr5 77652946 77653576 -125431956 + L1ME2 LINE L1 3855 4562 -1584 2470 141 24 12 chr5 77653576 77653995 -125431537 + MSTA LTR MaLR 5 428 0 1354 269 92 43 chr5 77653995 77654453 -125431079 + L1ME2 LINE L1 4562 4996 -1150 26 82 0 0 chr5 77654633 77654694 -125430838 + AT_rich Low_complexity Low_complexity 1 61 0 809 238 176 27 chr5 77654749 77655123 -125430409 + L1ME2 LINE L1 5329 5758 -406 545 216 173 22 chr5 77655128 77655313 -125430219 - MER20 DNA MER1_type -6 213 1 594 256 56 34 chr5 77655326 77655592 -125429940 + L1ME2 LINE L1 5768 6039 -125 306 289 19 0 chr5 77655585 77655689 -125429843 + L1MA10 LINE L1 6225 6330 -4 * 525 251 101 22 chr5 77655693 77655836 -125429696 + LTR37B LTR ERV1 221 390 -78 1238 234 37 68 chr5 77655836 77656318 -125429214 - MLT1C LTR MaLR 0 467 1 525 251 101 22 chr5 77656318 77656401 -125429131 + LTR37B LTR ERV1 390 465 -3 405 222 62 25 chr5 77656635 77656797 -125428735 - L1M4 LINE L1 -2163 3983 3816 31 68 0 0 chr5 77656874 77656933 -125428599 + AT_rich Low_complexity Low_complexity 1 59 0 29 78 0 0 chr5 77657596 77657660 -125427872 + AT_rich Low_complexity Low_complexity 1 64 0 38 39 0 0 chr5 77657764 77657816 -125427716 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 77657895 77657917 -125427615 + AT_rich Low_complexity Low_complexity 1 22 0 206 300 0 0 chr5 77658795 77658845 -125426687 - MER5A DNA MER1_type -87 102 53 945 149 8 115 chr5 77659779 77660014 -125425518 - MER2 DNA MER2_type -135 210 1 232 246 132 53 chr5 77660647 77660761 -125424771 + L2 LINE L2 3158 3280 -33 204 354 0 0 chr5 77661273 77661434 -125424098 + T-rich Low_complexity Low_complexity 1 161 0 307 317 36 24 chr5 77661781 77661948 -125423584 - L1MEc LINE L1 -4709 1687 1519 40 21 0 0 chr5 77663767 77663814 -125421718 + AT_rich Low_complexity Low_complexity 1 47 0 240 212 0 0 chr5 77663857 77663923 -125421609 + T-rich Low_complexity Low_complexity 2 67 0 247 353 32 19 chr5 77664177 77664333 -125421199 + L2 LINE L2 2431 2588 -726 22 0 0 0 chr5 77665415 77665437 -125420095 + AT_rich Low_complexity Low_complexity 1 22 0 6181 109 6 9 chr5 77665579 77667096 -125418436 + L1PA8A LINE L1 4592 6101 -30 273 316 108 38 chr5 77667129 77667417 -125418115 - MER65A LTR ERV1 -137 308 1 2943 260 71 51 chr5 77667417 77669087 -125416445 - MER65A-int LTR ERV1 0 4871 3355 2003 196 48 32 chr5 77669069 77669626 -125415906 - MER41-int LTR ERV1 -1112 3824 3259 * 1275 82 39 0 chr5 77670134 77670316 -125415216 + L1PB1 LINE L1 5600 5788 -363 429 206 0 0 chr5 77670317 77670409 -125415123 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 2654 100 0 0 chr5 77670411 77670780 -125414752 + L1PB1 LINE L1 5782 6150 -1 1673 6 0 0 chr5 77670982 77671163 -125414369 + AluYa5 SINE Alu 131 311 0 1293 165 113 119 chr5 77673516 77674116 -125411416 - MER41-int LTR ERV1 -1755 4576 2611 5625 107 33 9 chr5 77674135 77675005 -125410527 - L1PA15 LINE L1 0 6165 5275 1793 289 48 47 chr5 77675007 77675752 -125409780 - L1PA12 LINE L1 -6834 747 2 800 221 74 118 chr5 77675759 77676355 -125409177 - MER41-int LTR ERV1 -1697 3183 2329 586 260 68 67 chr5 77676331 77677021 -125408511 - MER41-int LTR ERV1 -2943 2980 2292 * 192 77 0 0 chr5 77677021 77677047 -125408485 + (CA)n Simple_repeat Simple_repeat 2 27 0 586 260 68 67 chr5 77677047 77677320 -125408212 - MER41-int LTR ERV1 -3631 2292 1150 287 196 196 9 chr5 77677360 77677472 -125408060 - MER34C LTR ERV1 -293 292 160 379 192 40 30 chr5 77677474 77677573 -125407959 - MER41-int LTR ERV1 -4133 990 891 672 291 92 40 chr5 77677905 77678035 -125407497 - MER65A LTR ERV1 0 445 323 2068 131 150 5 chr5 77678035 77678409 -125407123 - MSTA LTR MaLR 0 428 1 672 291 92 40 chr5 77678409 77678701 -125406831 - MER65A LTR ERV1 -122 323 1 2227 115 3 0 chr5 77678761 77679065 -125406467 + AluSp SINE Alu 1 305 -8 547 252 93 39 chr5 77679786 77680044 -125405488 + MER20B DNA MER1_type 234 505 -278 232 184 0 0 chr5 77680239 77680288 -125405244 + L1MC4 LINE L1 6654 6702 -1340 1964 146 32 40 chr5 77680370 77680748 -125404784 - THE1C LTR MaLR 0 375 1 1855 164 107 13 chr5 77680780 77681171 -125404361 + MSTA LTR MaLR 1 428 0 607 194 220 84 chr5 77681241 77681628 -125403904 + MER31B LTR ERV1 1 511 -3 234 348 35 17 chr5 77681778 77681893 -125403639 + HAL1 LINE L1 348 464 -2043 186 277 111 79 chr5 77682025 77682368 -125403164 - L2 LINE L2 -1651 1663 1310 261 83 0 0 chr5 77682555 77682591 -125402941 + (GA)n Simple_repeat Simple_repeat 1 36 0 796 240 55 10 chr5 77682629 77682829 -125402703 - MER58A DNA MER1_type -12 212 4 330 236 166 57 chr5 77682888 77683045 -125402487 + MER5B DNA MER1_type 5 178 0 229 315 72 9 chr5 77683097 77683208 -125402324 - L2 LINE L2 -2343 971 854 1124 248 133 41 chr5 77683261 77683779 -125401753 + MLT1F1 LTR MaLR 3 565 -2 28 91 0 0 chr5 77685178 77685255 -125400277 + AT_rich Low_complexity Low_complexity 1 77 0 1993 138 7 0 chr5 77685346 77685643 -125399889 + AluSx SINE Alu 1 299 -13 201 269 15 45 chr5 77686143 77686210 -125399322 - MER5B DNA MER1_type -111 67 3 919 309 60 19 chr5 77686212 77686642 -125398890 - MLT1J LTR MaLR -60 451 4 205 171 0 0 chr5 77686722 77686757 -125398775 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 77686978 77687000 -125398532 + AT_rich Low_complexity Low_complexity 1 22 0 2174 38 0 4 chr5 77687006 77687271 -125398261 - L1PA5 LINE L1 -293 5861 5598 2265 74 0 0 chr5 77687271 77687567 -125397965 + L1PA5 LINE L1 5853 6150 -4 184 316 76 25 chr5 77687662 77687741 -125397791 - MER5B DNA MER1_type -44 134 52 22 70 0 0 chr5 77689077 77689120 -125396412 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr5 77689302 77689332 -125396200 + AT_rich Low_complexity Low_complexity 1 30 0 2230 95 0 19 chr5 77689437 77689753 -125395779 + AluSg SINE Alu 1 310 0 932 286 69 20 chr5 77690069 77690461 -125395071 - L1ME1 LINE L1 -5 6441 6031 373 114 45 11 chr5 77690499 77690587 -125394945 + (TA)n Simple_repeat Simple_repeat 2 92 0 315 227 65 141 chr5 77690592 77690949 -125394583 - L1ME1 LINE L1 -1425 5001 4618 1765 193 52 37 chr5 77690949 77691156 -125394376 + LTR57 LTR ERVL 1 203 -208 2368 67 0 0 chr5 77691156 77691435 -125394097 + AluY SINE Alu 1 279 -32 189 0 0 0 chr5 77691435 77691456 -125394076 + (GAAAA)n Simple_repeat Simple_repeat 3 23 0 1374 25 0 0 chr5 77691456 77691618 -125393914 + (GGAAA)n Simple_repeat Simple_repeat 2 163 0 2368 67 0 0 chr5 77691618 77691635 -125393897 + AluY SINE Alu 277 298 -13 1765 193 52 37 chr5 77691635 77691832 -125393700 + LTR57 LTR ERVL 203 411 0 315 227 65 141 chr5 77691832 77692139 -125393393 - L1ME1 LINE L1 -1808 4618 4388 423 299 96 46 chr5 77692228 77692552 -125392980 - L1ME1 LINE L1 -4994 1432 1093 1327 215 10 10 chr5 77692876 77693164 -125392368 - AluJo SINE Alu -24 288 1 21 82 0 0 chr5 77693293 77693342 -125392190 + AT_rich Low_complexity Low_complexity 1 49 0 30 0 0 0 chr5 77694349 77694379 -125391153 + AT_rich Low_complexity Low_complexity 1 30 0 219 170 0 0 chr5 77695156 77695203 -125390329 + (TA)n Simple_repeat Simple_repeat 2 48 0 205 227 0 30 chr5 77696563 77696629 -125388903 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 614 224 179 63 chr5 77698120 77698455 -125387077 + MLT1A2 LTR MaLR 1 374 0 267 109 254 0 chr5 77698980 77699035 -125386497 + HERVK3 LTR ERVK 150 218 -7025 418 262 8 25 chr5 77699099 77699221 -125386311 + HERVK3 LTR ERVK 55 174 -7069 24 0 0 0 chr5 77699377 77699401 -125386131 + AT_rich Low_complexity Low_complexity 1 24 0 547 26 26 0 chr5 77699463 77699540 -125385992 + (TA)n Simple_repeat Simple_repeat 1 79 0 5026 124 26 5 chr5 77699661 77700462 -125385070 - L1MA3 LINE L1 -35 6270 5453 244 370 19 9 chr5 77700580 77700688 -125384844 - L2 LINE L2 -6 3307 3199 1537 163 40 72 chr5 77700833 77701207 -125384325 + THE1B LTR MaLR 1 362 -2 1649 222 175 30 chr5 77701816 77702415 -125383117 + MER76 LTR ERV 1 686 -2 232 368 0 0 chr5 77702522 77702590 -125382942 - L2 LINE L2 -67 3205 3138 188 382 22 22 chr5 77702685 77702821 -125382711 - L2 LINE L2 -196 3076 2941 332 48 63 0 chr5 77702880 77702943 -125382589 + (TA)n Simple_repeat Simple_repeat 1 67 0 290 326 36 0 chr5 77703154 77703292 -125382240 + L1ME2 LINE L1 5669 5811 -310 658 266 124 12 chr5 77703528 77703851 -125381681 + L1ME2 LINE L1 5782 6140 -24 330 248 67 29 chr5 77705258 77705363 -125380169 - MIR SINE MIR -72 190 82 2025 104 59 0 chr5 77707085 77707374 -125378158 - AluSq SINE Alu -7 306 1 3307 59 9 2 chr5 77709059 77709485 -125376047 + L1PA8 LINE L1 5741 6169 -3 912 236 157 20 chr5 77709854 77710202 -125375330 - Charlie2 DNA MER1_type -545 2317 1905 216 0 0 0 chr5 77710202 77710226 -125375306 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 912 236 157 20 chr5 77710226 77710279 -125375253 - Charlie2 DNA MER1_type -957 1905 1861 479 255 129 70 chr5 77710294 77710580 -125374952 - Charlie2 DNA MER1_type -2545 317 15 1889 145 6 39 chr5 77710786 77711097 -125374435 - AluSx SINE Alu -11 301 1 1053 178 17 0 chr5 77711163 77711337 -125374195 + AluJb SINE Alu 117 293 -19 1635 210 14 19 chr5 77713006 77713373 -125372159 - MER89 LTR ERV1 0 559 195 287 182 104 13 chr5 77713361 77713438 -125372094 - MER89 LTR ERV1 -475 84 1 * 2272 116 0 0 chr5 77714393 77714694 -125370838 - AluSg SINE Alu -9 301 1 414 0 0 0 chr5 77716053 77716099 -125369433 + (TG)n Simple_repeat Simple_repeat 1 46 0 529 267 82 31 chr5 77717317 77717512 -125368020 - MLT1J2 LTR MaLR -6 444 240 264 270 27 0 chr5 77717602 77717676 -125367856 - MLT1J2 LTR MaLR -374 76 1 1467 205 0 0 chr5 77718168 77718427 -125367105 + AluSq SINE Alu 1 259 -54 6054 53 0 0 chr5 77719604 77720353 -125365179 + L1PA6 LINE L1 5392 6140 -14 711 163 22 7 chr5 77721089 77721224 -125364308 - LTR3b LTR ERVK -47 453 317 4574 164 31 42 chr5 77721224 77722574 -125362958 - HERVK3 LTR ERVK -384 5561 1321 412 265 0 31 chr5 77722562 77722660 -125362872 - HERVK3 LTR ERVK -6563 680 586 * 571 249 99 15 chr5 77722716 77722917 -125362615 - HERVK3 LTR ERVK -6971 272 55 264 109 254 0 chr5 77722981 77723036 -125362496 - HERVK3 LTR ERVK -7025 218 150 607 222 186 63 chr5 77723561 77723894 -125361638 - MLT1A2 LTR MaLR 0 374 1 205 227 0 30 chr5 77725385 77725451 -125360081 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 219 170 0 0 chr5 77726811 77726858 -125358674 + (TA)n Simple_repeat Simple_repeat 2 48 0 2762 7 0 0 chr5 77727515 77727819 -125357713 + AluYa5 SINE Alu 1 304 -7 30 0 0 0 chr5 77727954 77727984 -125357548 + AT_rich Low_complexity Low_complexity 1 30 0 21 82 0 0 chr5 77728991 77729040 -125356492 + AT_rich Low_complexity Low_complexity 1 49 0 1277 219 10 10 chr5 77729169 77729457 -125356075 + AluJo SINE Alu 1 288 -24 429 299 96 46 chr5 77729781 77730105 -125355427 + L1MCa LINE L1 1093 1432 -4994 337 227 65 141 chr5 77730194 77730501 -125355031 + L1M4 LINE L1 4108 4437 -1709 1738 193 52 37 chr5 77730501 77730698 -125354834 - LTR57 LTR ERVL 0 411 218 2324 67 0 0 chr5 77730698 77730715 -125354817 - AluY SINE Alu -13 298 282 1149 29 0 0 chr5 77730715 77730852 -125354680 + (TTTCC)n Simple_repeat Simple_repeat 2 138 0 189 0 0 0 chr5 77730852 77730873 -125354659 + (TTTTC)n Simple_repeat Simple_repeat 3 23 0 2324 67 0 0 chr5 77730873 77731152 -125354380 - AluY SINE Alu -27 284 1 1738 193 52 37 chr5 77731152 77731359 -125354173 - LTR57 LTR ERVL -193 218 1 337 227 65 141 chr5 77731359 77731716 -125353816 + L1M4 LINE L1 4437 4721 -1425 373 114 45 11 chr5 77731721 77731809 -125353723 + (TA)n Simple_repeat Simple_repeat 1 91 0 936 288 69 20 chr5 77731847 77732239 -125353293 + L1ME1 LINE L1 5751 6161 -5 2154 101 0 19 chr5 77732551 77732867 -125352665 - AluSg SINE Alu 0 310 1 22 70 0 0 chr5 77733184 77733227 -125352305 + AT_rich Low_complexity Low_complexity 1 43 0 219 307 68 23 chr5 77734563 77734651 -125350881 + MER5B DNA MER1_type 52 143 -35 2254 76 0 0 chr5 77734737 77735039 -125350493 - L1PA5 LINE L1 0 6154 5853 2120 42 0 4 chr5 77735039 77735302 -125350230 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 77735308 77735330 -125350202 + AT_rich Low_complexity Low_complexity 1 22 0 941 307 60 19 chr5 77735666 77736096 -125349436 + MLT1J LTR MaLR 4 451 -60 199 288 15 30 chr5 77736102 77736168 -125349364 + MER5B DNA MER1_type 6 70 -108 181 312 46 46 chr5 77736634 77736665 -125348867 + MIR SINE MIR 72 102 -160 1961 138 7 0 chr5 77736665 77736962 -125348570 - AluSx SINE Alu -13 299 1 181 312 46 46 chr5 77736962 77737039 -125348493 + MIR SINE MIR 101 180 -82 32 91 0 0 chr5 77737042 77737130 -125348402 + AT_rich Low_complexity Low_complexity 1 88 0 1127 251 133 41 chr5 77738529 77739047 -125346485 - MLT1F1 LTR MaLR -2 565 3 231 306 72 9 chr5 77739100 77739211 -125346321 + L2 LINE L2 854 971 -2343 323 236 166 57 chr5 77739263 77739420 -125346112 - MER5B DNA MER1_type 0 178 5 800 248 53 10 chr5 77739479 77739685 -125345847 + MER58A DNA MER1_type 4 218 -6 249 33 0 0 chr5 77739718 77739748 -125345784 + (TC)n Simple_repeat Simple_repeat 1 30 0 196 325 169 45 chr5 77739786 77740278 -125345254 + L2 LINE L2 1111 1663 -1651 243 348 35 17 chr5 77740410 77740525 -125345007 - HAL1 LINE L1 -2043 464 348 590 213 194 70 chr5 77740671 77741062 -125344470 - MER31B LTR ERV1 0 514 1 1824 182 102 8 chr5 77741132 77741523 -125344009 - MSTA LTR MaLR 0 428 1 1958 143 32 40 chr5 77741555 77741933 -125343599 + THE1C LTR MaLR 1 375 0 243 0 0 0 chr5 77742026 77742053 -125343479 + (CA)n Simple_repeat Simple_repeat 2 28 0 566 252 93 39 chr5 77742269 77742527 -125343005 - MER20B DNA MER1_type -278 505 234 2196 115 3 0 chr5 77743248 77743552 -125341980 - AluSp SINE Alu -8 305 1 689 286 95 43 chr5 77743612 77743904 -125341628 + MER65A LTR ERV1 1 323 -122 2045 131 150 5 chr5 77743904 77744278 -125341254 + MSTA LTR MaLR 1 428 0 689 286 95 43 chr5 77744278 77744408 -125341124 + MER65A LTR ERV1 323 445 0 391 192 40 30 chr5 77744740 77744839 -125340693 + MER65A-int LTR ERV1 891 990 -4133 292 196 196 9 chr5 77744841 77744953 -125340579 + MER34C LTR ERV1 160 292 -293 604 253 54 67 chr5 77744993 77745266 -125340266 + MER65A-int LTR ERV1 1150 1425 -3511 192 77 0 0 chr5 77745266 77745292 -125340240 + (TG)n Simple_repeat Simple_repeat 2 27 0 604 253 54 67 chr5 77745292 77745982 -125339550 + MER65A-int LTR ERV1 1425 1993 -2943 * 821 221 74 118 chr5 77745958 77746554 -125338978 + MER65A-int LTR ERV1 2329 3183 -1697 1741 289 48 47 chr5 77746561 77747306 -125338226 + L1PA12 LINE L1 2 747 -6834 5642 107 33 9 chr5 77747308 77748178 -125337354 + L1PA15 LINE L1 5275 6165 0 1336 165 113 119 chr5 77748197 77748797 -125336735 + MER65A-int LTR ERV1 2611 4576 -1755 1651 6 0 0 chr5 77751151 77751332 -125334200 - AluYa5 SINE Alu 0 311 131 2650 100 0 0 chr5 77751534 77751903 -125333629 - L1PB1 LINE L1 -1 6150 5782 420 191 0 0 chr5 77751905 77751989 -125333543 + (CATATA)n Simple_repeat Simple_repeat 3 86 0 1279 82 39 0 chr5 77751996 77752178 -125333354 - L1PB1 LINE L1 -363 5788 5600 2051 201 45 29 chr5 77752686 77753243 -125332289 + MER65A-int LTR ERV1 3259 3824 -1112 * 3003 264 68 48 chr5 77753225 77754895 -125330637 + MER65A-int LTR ERV1 3355 4871 0 412 301 92 66 chr5 77754895 77755170 -125330362 + MER65A LTR ERV1 1 292 -153 6121 93 12 20 chr5 77755170 77756733 -125328799 - L1PA8A LINE L1 0 6131 4592 412 301 92 66 chr5 77756733 77756882 -125328650 + MER65A LTR ERV1 292 436 -9 247 353 32 19 chr5 77757979 77758135 -125327397 - L2 LINE L2 -726 2588 2431 240 212 0 0 chr5 77758389 77758455 -125327077 + A-rich Low_complexity Low_complexity 2 67 0 40 21 0 0 chr5 77758498 77758545 -125326987 + AT_rich Low_complexity Low_complexity 1 47 0 307 317 36 24 chr5 77760364 77760531 -125325001 + L1MEc LINE L1 1519 1687 -4709 204 354 0 0 chr5 77760878 77761039 -125324493 + A-rich Low_complexity Low_complexity 1 161 0 232 246 132 53 chr5 77761551 77761665 -125323867 - L2 LINE L2 -33 3280 3158 945 149 8 115 chr5 77762298 77762533 -125322999 + MER2 DNA MER2_type 1 210 -135 206 300 0 0 chr5 77763467 77763517 -125322015 + MER5A DNA MER1_type 53 102 -87 22 0 0 0 chr5 77764395 77764417 -125321115 + AT_rich Low_complexity Low_complexity 1 22 0 38 39 0 0 chr5 77764496 77764548 -125320984 + AT_rich Low_complexity Low_complexity 1 52 0 29 78 0 0 chr5 77764652 77764716 -125320816 + AT_rich Low_complexity Low_complexity 1 64 0 31 68 0 0 chr5 77765379 77765438 -125320094 + AT_rich Low_complexity Low_complexity 1 59 0 405 222 62 25 chr5 77765515 77765677 -125319855 + L1M4 LINE L1 3816 3983 -2163 525 251 101 22 chr5 77765911 77765994 -125319538 - LTR37B LTR ERV1 -3 465 390 1225 236 37 68 chr5 77765994 77766476 -125319056 + MLT1C LTR MaLR 1 467 0 525 251 101 22 chr5 77766476 77766619 -125318913 - LTR37B LTR ERV1 -78 390 221 306 289 19 0 chr5 77766623 77766727 -125318805 - L1MA10 LINE L1 -4 6330 6225 * 594 256 56 34 chr5 77766720 77766986 -125318546 - L1ME2 LINE L1 -125 6039 5768 545 216 173 22 chr5 77766999 77767184 -125318348 + MER20 DNA MER1_type 1 213 -6 809 238 176 27 chr5 77767189 77767563 -125317969 - L1ME2 LINE L1 -406 5758 5329 26 82 0 0 chr5 77767618 77767679 -125317853 + AT_rich Low_complexity Low_complexity 1 61 0 1354 269 92 43 chr5 77767859 77768317 -125317215 - L1ME2 LINE L1 -1150 4996 4562 2470 141 24 12 chr5 77768317 77768736 -125316796 - MSTA LTR MaLR 0 428 5 1354 269 92 43 chr5 77768736 77769366 -125316166 - L1ME2 LINE L1 -1584 4562 3855 23 0 0 0 chr5 77769598 77769621 -125315911 + AT_rich Low_complexity Low_complexity 1 23 0 1993 139 7 3 chr5 77770167 77770476 -125315056 - AluSx SINE Alu -2 310 1 189 0 0 0 chr5 77770772 77770793 -125314739 + (TG)n Simple_repeat Simple_repeat 2 22 0 237 215 15 15 chr5 77770813 77770878 -125314654 + (TA)n Simple_repeat Simple_repeat 1 65 0 333 68 0 0 chr5 77770885 77770929 -125314603 + (TG)n Simple_repeat Simple_repeat 1 44 0 408 319 108 32 chr5 77771535 77771814 -125313718 - L1MC/D LINE L1 -2213 5595 5296 239 298 76 66 chr5 77771989 77772565 -125312967 - L1ME LINE L1 -252 5918 5340 332 333 60 47 chr5 77772807 77773182 -125312350 - L1ME LINE L1 -1424 4722 4348 24 96 0 0 chr5 77774397 77774470 -125311062 + AT_rich Low_complexity Low_complexity 1 73 0 21 0 0 0 chr5 77774889 77774910 -125310622 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr5 77775636 77775652 -125309880 + (CA)n Simple_repeat Simple_repeat 1 49 0 297 0 0 0 chr5 77775652 77775685 -125309847 + (CA)n Simple_repeat Simple_repeat 2 34 0 283 58 0 39 chr5 77776664 77776716 -125308816 + (CA)n Simple_repeat Simple_repeat 2 51 0 266 224 19 112 chr5 77776914 77777021 -125308511 + MER110A LTR ERV1 74 170 -298 431 335 60 4 chr5 77777094 77777360 -125308172 + MER110 LTR ERV1 185 465 -26 630 183 44 48 chr5 77777727 77777978 -125307554 + pTR5 LTR ERV1 743 992 -1446 * 1967 183 104 41 chr5 77777957 77778879 -125306653 + pTR5 LTR ERV1 924 2179 -259 11410 233 26 44 chr5 77779279 77780010 -125305522 - L1PA16 LINE L1 -104 7500 6757 1811 80 19 89 chr5 77780010 77780324 -125305208 - L1PA10 LINE L1 -1 6167 5876 11410 233 26 44 chr5 77780324 77781289 -125304243 - L1PA16 LINE L1 -847 6757 5776 1066 179 147 62 chr5 77781289 77781562 -125303970 - AluJo SINE Alu -5 297 2 11410 233 26 44 chr5 77781562 77785293 -125300239 - L1PA16 LINE L1 -1828 5776 2182 404 362 68 10 chr5 77785417 77785624 -125299908 - L1PA16 LINE L1 -6564 1010 792 22 56 0 0 chr5 77785757 77785793 -125299739 + AT_rich Low_complexity Low_complexity 1 36 0 1948 133 3 16 chr5 77786317 77786634 -125298898 + AluSq SINE Alu 1 313 0 1033 110 7 0 chr5 77786783 77786928 -125298604 - AluSg/x SINE Alu -16 296 151 241 363 97 37 chr5 77786953 77787355 -125298177 + MLT1J1 LTR MaLR 21 446 0 216 97 0 0 chr5 77787622 77787653 -125297879 + (A)n Simple_repeat Simple_repeat 1 31 0 735 278 28 9 chr5 77787691 77787903 -125297629 - MER20 DNA MER1_type -2 217 2 295 328 9 17 chr5 77789098 77789214 -125296318 - MIR SINE MIR -24 238 124 1434 265 51 13 chr5 77789482 77789935 -125295597 + MLT1D LTR MaLR 36 505 0 1669 174 130 18 chr5 77790379 77790763 -125294769 - MSTA LTR MaLR -1 427 1 8856 158 8 34 chr5 77790763 77792383 -125293149 - MSTA-int LTR MaLR 0 1580 3 1788 144 158 13 chr5 77792385 77792759 -125292773 - MSTA LTR MaLR 0 428 1 441 0 0 0 chr5 77793531 77793580 -125291952 + (TG)n Simple_repeat Simple_repeat 2 50 0 1208 187 154 3 chr5 77793651 77793722 -125291810 - MER47A DNA MER2_type -1972 351 292 12485 59 8 0 chr5 77793722 77796110 -125289422 + L1PA6 LINE L1 3742 6150 -4 1208 187 154 3 chr5 77796110 77796343 -125289189 - MER47A DNA MER2_type -2031 292 1 465 329 43 10 chr5 77796863 77797070 -125288462 - MER110 LTR ERV1 -36 455 242 662 199 112 23 chr5 77797275 77797495 -125288037 + MER33 DNA MER1_type 1 226 -98 975 270 9 0 chr5 77797633 77797862 -125287670 - MLT1D LTR MaLR 0 505 275 956 180 11 26 chr5 77797862 77798051 -125287481 - MLT1A2 LTR MaLR 0 374 189 363 309 0 0 chr5 77798125 77798235 -125287297 - MLT1A2 LTR MaLR -214 160 51 289 170 0 0 chr5 77798282 77798329 -125287203 - MLT1A2 LTR MaLR -327 47 1 744 241 56 14 chr5 77798370 77798586 -125286946 - MLT1D LTR MaLR -280 225 1 1382 270 97 82 chr5 77798793 77800299 -125285233 - MER110-int LTR ERV1 -1057 3590 1952 3779 184 38 0 chr5 77800397 77801127 -125284405 + Tigger2 DNA MER2_type 2 759 -1959 1001 153 98 86 chr5 77801181 77801436 -125284096 + Tigger2 DNA MER2_type 2451 2708 -10 240 366 102 14 chr5 77802217 77802433 -125283099 - L2 LINE L2 -1051 2263 2029 183 299 5 139 chr5 77802735 77802929 -125282603 - MIR SINE MIR -42 220 53 10813 36 0 0 chr5 77802968 77804282 -125281250 - L1PA3 LINE L1 -743 5403 4090 6095 39 0 1 chr5 77804282 77805011 -125280521 + L1PA3 LINE L1 5414 6152 -3 29 0 0 0 chr5 77805164 77805193 -125280339 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr5 77805520 77805571 -125279961 + AT_rich Low_complexity Low_complexity 1 51 0 519 342 26 0 chr5 77806946 77807180 -125278352 + LTR16A LTR ERVL 27 266 -184 347 73 18 0 chr5 77807484 77807539 -125277993 + (TG)n Simple_repeat Simple_repeat 1 56 0 308 254 0 162 chr5 77808051 77808224 -125277308 + L2 LINE L2 3165 3309 -4 268 291 169 38 chr5 77810298 77810559 -125274973 + MLT1J LTR MaLR 7 301 -210 324 119 0 60 chr5 77810723 77810790 -125274742 - MADE1 DNA Mariner -17 63 1 1299 210 53 11 chr5 77812102 77812383 -125273149 + AluJo SINE Alu 1 293 -19 28 48 0 0 chr5 77813528 77813570 -125271962 + AT_rich Low_complexity Low_complexity 1 42 0 2010 129 7 3 chr5 77813920 77814215 -125271317 + AluSq SINE Alu 3 298 -15 705 88 0 10 chr5 77814420 77814522 -125271010 - AluSc SINE Alu -11 298 198 21 0 0 0 chr5 77864617 77864638 -125220894 + AT_rich Low_complexity Low_complexity 1 21 0 267 288 68 0 chr5 77867280 77867353 -125218179 + L2 LINE L2 3193 3270 -2 438 318 17 0 chr5 77869171 77869347 -125216185 + L1MEc LINE L1 102 280 -6116 538 213 20 33 chr5 77869670 77869820 -125215712 + MER105 DNA DNA 2 149 -55 244 203 119 0 chr5 77869867 77869926 -125215606 + MER105 DNA DNA 138 203 -1 227 287 0 90 chr5 77869927 77870040 -125215492 + L1MEc LINE L1 633 724 -5672 1571 185 23 32 chr5 77870040 77870348 -125215184 - AluJo SINE Alu -7 305 1 227 287 0 90 chr5 77870348 77870422 -125215110 + L1MEc LINE L1 724 803 -5593 2218 100 10 0 chr5 77870431 77870721 -125214811 - AluY SINE Alu -18 293 1 2116 130 10 3 chr5 77870751 77871044 -125214488 + AluSx SINE Alu 1 295 -17 2202 121 0 13 chr5 77871045 77871181 -125214351 + AluSx SINE Alu 1 137 -175 2342 84 0 36 chr5 77871181 77871489 -125214043 + AluSc SINE Alu 1 297 -12 2202 121 0 13 chr5 77871489 77871659 -125213873 + AluSx SINE Alu 137 303 -9 23 0 0 0 chr5 77871672 77871695 -125213837 + AT_rich Low_complexity Low_complexity 1 23 0 2571 60 0 0 chr5 77871755 77872055 -125213477 + AluY SINE Alu 3 302 -9 1140 255 149 35 chr5 77872074 77872258 -125213274 + L1MEc LINE L1 776 938 -5458 2341 75 4 0 chr5 77872258 77872568 -125212964 + AluY SINE Alu 1 311 0 1140 255 149 35 chr5 77872568 77873278 -125212254 + L1MEc LINE L1 938 1858 -4538 2323 96 6 6 chr5 77873317 77873630 -125211902 - AluSp SINE Alu 0 313 1 1749 184 13 7 chr5 77873681 77873991 -125211541 + AluJb SINE Alu 1 312 0 22 0 0 0 chr5 77874017 77874039 -125211493 + AT_rich Low_complexity Low_complexity 1 22 0 450 111 0 0 chr5 77874039 77874102 -125211430 - HY3 scRNA scRNA -37 64 2 1678 191 43 0 chr5 77874160 77874459 -125211073 + AluJo SINE Alu 1 312 0 1908 137 0 38 chr5 77874462 77874605 -125210927 + AluSx SINE Alu 1 148 -164 2509 54 0 3 chr5 77874605 77874900 -125210632 + AluY SINE Alu 1 294 -17 1908 137 0 38 chr5 77874900 77875070 -125210462 + AluSx SINE Alu 148 302 -10 425 154 33 66 chr5 77875200 77875291 -125210241 + MER21A LTR ERV1 486 573 -358 1576 153 15 98 chr5 77876200 77876527 -125209005 + AluJb SINE Alu 1 300 -12 22 35 0 0 chr5 77876649 77876678 -125208854 + AT_rich Low_complexity Low_complexity 1 29 0 1707 152 10 33 chr5 77876683 77876748 -125208784 + AluJb SINE Alu 1 66 -246 2032 146 3 0 chr5 77876748 77877043 -125208489 - AluSx SINE Alu -16 296 1 1707 152 10 33 chr5 77877043 77877280 -125208252 + AluJb SINE Alu 66 296 -16 636 199 62 97 chr5 77877280 77877329 -125208203 + L1MEc LINE L1 3030 3079 -3136 2428 65 3 3 chr5 77877329 77877623 -125207909 + AluY SINE Alu 1 294 -17 636 199 62 97 chr5 77877623 77877703 -125207829 + L1MEc LINE L1 3079 3160 -3055 1890 35 0 4 chr5 77877703 77877931 -125207601 + L1PA4 LINE L1 5929 6155 0 636 199 62 97 chr5 77877931 77878036 -125207496 + L1MEc LINE L1 3160 3254 -2961 2391 82 3 0 chr5 77878036 77878339 -125207193 + AluY SINE Alu 1 304 -7 636 199 62 97 chr5 77878339 77878423 -125207109 + L1MEc LINE L1 3254 3339 -2876 1790 137 42 7 chr5 77878428 77878713 -125206819 + AluJb SINE Alu 12 306 -6 1035 249 79 10 chr5 77878714 77879107 -125206425 + L1MEc LINE L1 3510 3929 -2286 2330 87 0 3 chr5 77879133 77879421 -125206111 - AluSx SINE Alu -25 287 1 2235 112 3 7 chr5 77880156 77880461 -125205071 + AluSx SINE Alu 1 304 -8 249 146 0 0 chr5 77881573 77881621 -125203911 + (TG)n Simple_repeat Simple_repeat 1 48 0 31 0 0 0 chr5 77882790 77882821 -125202711 + AT_rich Low_complexity Low_complexity 1 31 0 196 238 0 75 chr5 77883610 77883690 -125201842 - MIR SINE MIR -64 198 125 186 360 67 37 chr5 77884446 77884610 -125200922 + MIR3 SINE MIR 19 187 -21 405 0 0 0 chr5 77885623 77885668 -125199864 + (CA)n Simple_repeat Simple_repeat 2 46 0 2384 61 0 61 chr5 77885688 77886017 -125199515 + AluY SINE Alu 1 309 -2 420 288 170 9 chr5 77886216 77886428 -125199104 + MIR SINE MIR 17 262 0 1666 155 4 4 chr5 77886571 77886848 -125198684 - AluSx SINE Alu -20 292 16 2349 90 0 10 chr5 77886940 77887251 -125198281 - AluY SINE Alu -3 308 1 25 0 0 0 chr5 77887478 77887503 -125198029 + AT_rich Low_complexity Low_complexity 1 25 0 192 77 0 0 chr5 77887832 77887858 -125197674 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 2042 151 10 0 chr5 77887865 77888164 -125197368 - AluSx SINE Alu -10 302 1 1067 212 93 11 chr5 77888586 77888855 -125196677 - AluJo SINE Alu -10 292 2 1867 136 7 20 chr5 77888924 77889218 -125196314 - AluSx SINE Alu -22 290 1 1919 126 7 32 chr5 77889423 77889732 -125195800 + AluJb SINE Alu 1 301 -11 26 0 0 0 chr5 77890963 77890989 -125194543 + AT_rich Low_complexity Low_complexity 1 26 0 221 266 75 0 chr5 77891162 77891256 -125194276 + MIR SINE MIR 106 206 -56 2162 105 30 7 chr5 77891818 77892123 -125193409 - AluSx SINE Alu 0 312 1 41 21 0 0 chr5 77892704 77892752 -125192780 + AT_rich Low_complexity Low_complexity 1 48 0 2172 114 7 0 chr5 77893740 77894029 -125191503 + AluSx SINE Alu 1 291 -21 647 227 75 49 chr5 77894169 77894312 -125191220 + MIR SINE MIR 3 155 -107 1212 189 59 0 chr5 77894312 77894534 -125190998 + MER46A DNA MER2_type 1 235 -1 647 227 75 49 chr5 77894534 77894606 -125190926 + MIR SINE MIR 155 224 -38 2423 91 0 0 chr5 77894608 77894915 -125190617 + AluSx SINE Alu 1 307 -5 198 300 133 0 chr5 77895004 77895094 -125190438 - MIR SINE MIR -38 224 123 569 156 56 0 chr5 77895135 77895225 -125190307 + AluSg/x SINE Alu 191 285 -24 1715 181 19 13 chr5 77895482 77895791 -125189741 - AluJb SINE Alu -1 311 1 1552 171 4 36 chr5 77895864 77896144 -125189388 + AluJo SINE Alu 31 301 -11 2251 118 0 0 chr5 77896470 77896775 -125188757 - AluSx SINE Alu -7 305 1 1951 154 0 20 chr5 77896984 77897283 -125188249 + AluJb SINE Alu 1 293 -19 1750 128 80 11 chr5 77897363 77897637 -125187895 + AluJo SINE Alu 1 293 -19 1716 163 13 40 chr5 77898056 77898357 -125187175 + AluJb SINE Alu 5 297 -15 23 54 0 0 chr5 77898521 77898558 -125186974 + AT_rich Low_complexity Low_complexity 1 37 0 1747 185 3 7 chr5 77898723 77899015 -125186517 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr5 77899042 77899064 -125186468 + AT_rich Low_complexity Low_complexity 1 22 0 1662 156 7 75 chr5 77899064 77899217 -125186315 - AluJb SINE Alu -25 287 164 2470 84 0 0 chr5 77899217 77899526 -125186006 - AluSc SINE Alu 0 309 1 1662 156 7 75 chr5 77899526 77899680 -125185852 - AluJb SINE Alu -148 164 1 1436 181 73 8 chr5 77899782 77900068 -125185464 - AluJo SINE Alu 0 307 5 2269 97 0 0 chr5 77900110 77900400 -125185132 + AluSg SINE Alu 1 290 -20 21 0 0 0 chr5 77902184 77902205 -125183327 + AT_rich Low_complexity Low_complexity 1 21 0 856 149 0 15 chr5 77902219 77902353 -125183179 + FLAM_C SINE Alu 2 133 0 1506 167 24 65 chr5 77902367 77902531 -125183001 - AluJo SINE Alu -30 282 134 2422 91 0 0 chr5 77902531 77902828 -125182704 - AluSq SINE Alu -16 297 1 1506 167 24 65 chr5 77902828 77902957 -125182575 - AluJo SINE Alu -178 134 1 23 0 0 0 chr5 77902960 77902983 -125182549 + AT_rich Low_complexity Low_complexity 1 23 0 2525 72 0 0 chr5 77903112 77903416 -125182116 - AluSq SINE Alu -9 304 1 2211 109 0 3 chr5 77903656 77903950 -125181582 - AluSx SINE Alu -19 293 1 1710 91 0 13 chr5 77904123 77904355 -125181177 - AluSx SINE Alu -11 299 71 2477 80 3 0 chr5 77904355 77904652 -125180880 - AluSp SINE Alu -13 300 1 502 161 11 11 chr5 77904652 77904739 -125180793 - AluSx SINE Alu -225 88 2 1949 133 7 10 chr5 77905100 77905402 -125180130 - AluSq SINE Alu -12 301 1 3580 124 7 36 chr5 77905706 77906334 -125179198 + MER4B LTR ERV1 1 779 0 1131 117 25 6 chr5 77906334 77906496 -125179036 + LTR29 LTR ERV1 458 622 0 3384 134 91 0 chr5 77906596 77907133 -125178399 - MER72 LTR ERV1 0 722 137 367 114 14 43 chr5 77907289 77907359 -125178173 - MER72 LTR ERV1 -654 68 1 300 286 157 21 chr5 77907359 77907497 -125178035 + MER76 LTR ERV 500 656 -32 267 152 76 25 chr5 77907876 77907955 -125177577 + FRAM SINE Alu 63 145 -21 209 161 16 65 chr5 77908365 77908407 -125177125 + CT-rich Low_complexity Low_complexity 2 42 -18 2184 104 0 20 chr5 77908407 77908705 -125176827 - AluSx SINE Alu -20 292 1 209 161 16 65 chr5 77908705 77908724 -125176808 + CT-rich Low_complexity Low_complexity 42 60 0 1199 259 99 25 chr5 77908735 77909049 -125176483 - MLT1K LTR MaLR -12 576 220 2437 95 0 0 chr5 77909049 77909354 -125176178 - AluSg SINE Alu -5 305 1 1199 259 99 25 chr5 77909354 77909475 -125176057 - MLT1K LTR MaLR -368 220 109 288 301 58 26 chr5 77910221 77910377 -125175155 + L2 LINE L2 2813 2973 -299 268 215 165 0 chr5 77910433 77910512 -125175020 - MIR SINE MIR -11 251 160 267 298 53 0 chr5 77910519 77910563 -125174969 - MIR SINE MIR -2 260 220 2619 53 0 0 chr5 77910563 77910864 -125174668 - AluY SINE Alu -10 301 1 267 298 53 0 chr5 77910864 77910913 -125174619 - MIR SINE MIR -42 220 162 2221 85 7 0 chr5 77910913 77911221 -125174311 - AluSq SINE Alu 0 310 1 512 265 102 41 chr5 77911221 77911466 -125174066 - HAL1 LINE L1 -1479 1028 769 456 355 54 9 chr5 77911580 77911915 -125173617 - HAL1 LINE L1 -1996 511 162 2315 113 0 0 chr5 77911919 77912221 -125173311 - AluSx SINE Alu -10 302 1 1037 227 60 0 chr5 77912763 77913063 -125172469 - L1 LINE L1 -783 5363 5046 883 204 23 0 chr5 77913051 77913227 -125172305 - L1MB4 LINE L1 -43 6137 5958 * 348 250 83 0 chr5 77913227 77913311 -125172221 - 5S rRNA rRNA -30 91 1 346 188 12 13 chr5 77913312 77913396 -125172136 - L1MB4 LINE L1 -206 5960 5883 24 0 0 0 chr5 77913475 77913499 -125172033 + AT_rich Low_complexity Low_complexity 1 24 0 1242 183 57 17 chr5 77913500 77913730 -125171802 - AluJo SINE Alu -28 284 46 699 281 118 37 chr5 77913794 77914471 -125171061 + L1M4 LINE L1 4598 5329 -817 1096 167 0 17 chr5 77914557 77914731 -125170801 - AluJb SINE Alu -22 290 120 1834 138 65 0 chr5 77914945 77915221 -125170311 - AluSx SINE Alu -18 294 1 29 0 0 0 chr5 77915401 77915430 -125170102 + AT_rich Low_complexity Low_complexity 1 29 0 2464 82 0 0 chr5 77916184 77916487 -125169045 + AluY SINE Alu 1 303 -8 1112 165 0 0 chr5 77916664 77916828 -125168704 - AluJb SINE Alu -9 303 140 2184 88 0 3 chr5 77916829 77917112 -125168420 - AluSx SINE Alu -30 282 1 339 254 88 54 chr5 77917184 77917396 -125168136 - L1 LINE L1 -1249 4897 4687 22 0 0 0 chr5 77917679 77917701 -125167831 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 77917899 77917924 -125167608 + AT_rich Low_complexity Low_complexity 1 25 0 1373 185 3 77 chr5 77918008 77918185 -125167347 - AluJo SINE Alu -12 300 156 2381 75 7 0 chr5 77918185 77918479 -125167053 - AluY SINE Alu -15 296 1 1373 185 3 77 chr5 77918479 77918625 -125166907 - AluJo SINE Alu -156 156 1 2419 97 0 0 chr5 77918642 77918950 -125166582 - AluSx SINE Alu -1 311 4 1924 167 0 3 chr5 77918955 77919254 -125166278 - AluSx SINE Alu -14 298 1 1541 115 0 5 chr5 77919322 77919540 -125165992 - AluSg/x SINE Alu -5 307 91 1958 152 0 16 chr5 77919564 77919874 -125165658 + AluSx SINE Alu 1 305 -7 398 294 89 64 chr5 77919924 77920159 -125165373 - L1ME LINE L1 -302 5819 5579 2189 112 3 6 chr5 77920542 77920854 -125164678 - AluSq SINE Alu -2 311 1 1930 155 10 0 chr5 77921048 77921339 -125164193 + AluJo SINE Alu 4 297 -15 1930 140 11 3 chr5 77921414 77921700 -125163832 - AluSx SINE Alu -24 288 1 189 0 0 0 chr5 77921900 77921921 -125163611 + (A)n Simple_repeat Simple_repeat 1 21 0 2158 104 44 0 chr5 77922402 77922699 -125162833 - AluSx SINE Alu 0 312 3 219 36 0 0 chr5 77923090 77923118 -125162414 + (CATA)n Simple_repeat Simple_repeat 4 31 0 832 124 0 0 chr5 77923121 77923242 -125162290 - AluSx SINE Alu -19 291 171 485 76 0 0 chr5 77923242 77923308 -125162224 + Alu SINE Alu 234 299 -12 1258 125 0 0 chr5 77923344 77923512 -125162020 - AluSx SINE Alu -144 168 1 1862 142 10 36 chr5 77923910 77924212 -125161320 + AluJo SINE Alu 1 294 -18 2483 81 0 3 chr5 77924216 77924524 -125161008 + AluY SINE Alu 1 307 -4 2097 112 29 0 chr5 77925226 77925533 -125159999 - AluSq SINE Alu 0 315 1 24 32 0 0 chr5 77925643 77925674 -125159858 + AT_rich Low_complexity Low_complexity 1 31 0 787 178 25 43 chr5 77925943 77926106 -125159426 + FRAM SINE Alu 1 158 -18 783 150 8 16 chr5 77926720 77926847 -125158685 + FLAM_C SINE Alu 1 126 -7 189 0 0 0 chr5 77926984 77927005 -125158527 + (TA)n Simple_repeat Simple_repeat 2 22 0 378 0 0 0 chr5 77927010 77927052 -125158480 + (CA)n Simple_repeat Simple_repeat 2 43 0 2053 130 0 7 chr5 77927057 77927349 -125158183 - AluJb SINE Alu -22 290 1 2132 133 7 0 chr5 77928182 77928490 -125157042 - AluSx SINE Alu -2 310 1 1332 197 80 8 chr5 77928512 77928811 -125156721 - AluJb SINE Alu 0 318 1 22 35 0 0 chr5 77929525 77929554 -125155978 + AT_rich Low_complexity Low_complexity 1 29 0 1660 144 72 11 chr5 77931579 77931683 -125153849 + AluJb SINE Alu 18 114 -198 245 87 0 22 chr5 77931683 77931729 -125153803 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1660 144 72 11 chr5 77931729 77931888 -125153644 + AluJb SINE Alu 114 297 -15 21 36 0 0 chr5 77932327 77932355 -125153177 + AT_rich Low_complexity Low_complexity 1 28 0 2040 143 0 25 chr5 77932999 77933314 -125152218 + AluJb SINE Alu 1 307 -5 2150 100 16 19 chr5 77933935 77934244 -125151288 - AluSg SINE Alu -1 309 2 252 304 159 0 chr5 77934962 77935100 -125150432 - L1MC/D LINE L1 -2101 5707 5548 1231 142 78 0 chr5 77935594 77935812 -125149720 + MER46A DNA MER2_type 1 235 -1 1015 164 78 13 chr5 77935857 77936088 -125149444 - L1MB3 LINE L1 -19 6164 5919 371 271 178 26 chr5 77936736 77937005 -125148527 - L1ME4a LINE L1 -73 6048 5739 23 54 0 0 chr5 77937130 77937167 -125148365 + AT_rich Low_complexity Low_complexity 1 37 0 621 201 14 43 chr5 77937323 77937462 -125148070 + FLAM_A SINE Alu 7 141 -1 946 105 0 15 chr5 77938018 77938151 -125147381 + FLAM_C SINE Alu 1 131 -2 2007 138 3 16 chr5 77938677 77938989 -125146543 - AluJb SINE Alu -4 308 1 2042 119 63 0 chr5 77939072 77939357 -125146175 - AluSq SINE Alu -10 303 1 5677 137 26 6 chr5 77939421 77940529 -125145003 - L1MA4 LINE L1 -5 6295 5167 546 315 109 22 chr5 77940874 77941141 -125144391 - L2 LINE L2 0 3313 3024 2335 88 7 0 chr5 77941144 77941440 -125144092 + AluSp SINE Alu 1 298 -15 2250 110 3 0 chr5 77941529 77941829 -125143703 - AluSp SINE Alu -12 301 1 25 0 0 0 chr5 77942740 77942765 -125142767 + AT_rich Low_complexity Low_complexity 1 25 0 2062 119 10 0 chr5 77943568 77943861 -125141671 - AluSq SINE Alu -17 296 1 5796 65 52 52 chr5 77944849 77945838 -125139694 - SVA Other Other 0 1386 433 3495 88 72 15 chr5 77945855 77946455 -125139077 - SVA Other Other -520 866 233 563 99 0 168 chr5 77946529 77946542 -125138990 - L1MB3 LINE L1 0 6183 6169 2402 97 3 0 chr5 77946542 77946850 -125138682 + AluSx SINE Alu 1 309 -3 563 99 0 168 chr5 77946850 77946896 -125138636 - L1MB3 LINE L1 -14 6169 6117 2154 135 7 0 chr5 77946896 77947199 -125138333 - AluSx SINE Alu -7 305 1 563 99 0 168 chr5 77947199 77947299 -125138233 - L1MB3 LINE L1 -66 6117 6050 833 129 0 0 chr5 77947314 77947430 -125138102 - FLAM_C SINE Alu -13 120 5 2587 186 28 33 chr5 77947586 77948022 -125137510 - L1MB3 LINE L1 -125 6058 5624 2201 103 16 29 chr5 77948022 77948334 -125137198 - AluSq SINE Alu -5 308 1 2587 186 28 33 chr5 77948334 77948509 -125137023 - L1MB3 LINE L1 -559 5624 5450 2137 108 7 0 chr5 77949326 77949613 -125135919 + AluSg SINE Alu 3 291 -19 1481 209 7 4 chr5 77949622 77949895 -125135637 + AluJo SINE Alu 1 274 -38 1684 193 0 27 chr5 77949909 77950282 -125135250 + L1MB8 LINE L1 5791 6153 -25 1976 160 0 28 chr5 77950437 77950756 -125134776 - AluSx SINE Alu -2 310 1 737 176 8 0 chr5 77950773 77950892 -125134640 - FLAM_A SINE Alu -10 123 4 1886 163 14 0 chr5 77951008 77951296 -125134236 + AluJb SINE Alu 1 292 -20 255 202 83 12 chr5 77951399 77951483 -125134049 + AluJb SINE Alu 211 300 -2 207 0 0 0 chr5 77951713 77951736 -125133796 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2133 96 0 0 chr5 77951750 77952021 -125133511 - AluSx SINE Alu -41 271 1 304 398 10 10 chr5 77952075 77952178 -125133354 + L2 LINE L2 3117 3219 -53 4087 183 31 13 chr5 77952979 77953661 -125131871 - L1MB7 LINE L1 0 6995 6327 1631 196 13 25 chr5 77953661 77953977 -125131555 - AluJo SINE Alu 0 312 1 4087 183 31 13 chr5 77953977 77954711 -125130821 - L1MB7 LINE L1 -668 6327 5550 1186 83 6 0 chr5 77954711 77954868 -125130664 - AluYa5 SINE Alu -8 303 146 2242 84 3 0 chr5 77954869 77955155 -125130377 - AluSp SINE Alu -26 287 1 763 154 178 0 chr5 77955155 77955324 -125130208 - L1MB7 LINE L1 -1763 5194 4996 226 171 0 0 chr5 77955324 77955358 -125130174 - MLT1C LTR MaLR 0 467 434 362 118 0 0 chr5 77955358 77955409 -125130123 - Tigger5 DNA MER2_type 0 2323 2273 2343 96 0 10 chr5 77955417 77955719 -125129813 - AluSx SINE Alu -13 299 1 1517 223 35 15 chr5 77955819 77956219 -125129313 - MLT1C LTR MaLR -52 415 8 676 201 21 0 chr5 77956226 77956370 -125129162 - L1MB7 LINE L1 -1961 4996 4850 1495 154 54 29 chr5 77956772 77957052 -125128480 + AluJo SINE Alu 3 289 -23 2291 97 0 31 chr5 77957061 77957381 -125128151 + AluSg SINE Alu 1 310 0 1159 221 108 0 chr5 77958163 77958498 -125127034 - L1MB7 LINE L1 -2100 4857 4487 744 261 105 7 chr5 77958541 77958817 -125126715 - L1MB7 LINE L1 -6543 316 14 186 43 0 0 chr5 77960486 77960509 -125125023 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 280 167 0 0 chr5 77960549 77960597 -125124935 - AluSp/q SINE Alu -9 294 247 575 124 196 0 chr5 77960880 77960977 -125124555 + FLAM_C SINE Alu 2 117 -16 838 150 26 7 chr5 77961007 77961160 -125124372 - Tigger2 DNA MER2_type -57 2661 2506 1718 189 23 3 chr5 77961298 77961600 -125123932 + AluJb SINE Alu 1 308 -4 1303 177 60 40 chr5 77961603 77961902 -125123630 + AluJb SINE Alu 1 305 -7 1259 162 42 0 chr5 77961986 77962202 -125123330 - Tigger2 DNA MER2_type -1965 753 529 2568 46 10 3 chr5 77962896 77963203 -125122329 + AluY SINE Alu 1 309 -2 1950 163 10 0 chr5 77963623 77963930 -125121602 - AluSx SINE Alu -2 310 1 737 176 8 0 chr5 77963947 77964066 -125121466 - FLAM_A SINE Alu -10 123 4 1886 163 14 0 chr5 77964182 77964470 -125121062 + AluJb SINE Alu 1 292 -20 255 202 83 12 chr5 77964573 77964657 -125120875 + AluJb SINE Alu 211 300 -2 207 0 0 0 chr5 77964887 77964910 -125120622 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2133 96 0 0 chr5 77964924 77965195 -125120337 - AluSx SINE Alu -41 271 1 304 398 10 10 chr5 77965249 77965352 -125120180 + L2 LINE L2 3117 3219 -53 4491 184 31 13 chr5 77966176 77966859 -125118673 - L1MB7 LINE L1 0 6995 6326 1623 197 13 22 chr5 77966859 77967174 -125118358 - AluJo SINE Alu 0 312 1 4491 184 31 13 chr5 77967174 77967907 -125117625 - L1MB7 LINE L1 -669 6326 5550 1193 83 6 0 chr5 77967907 77968064 -125117468 - AluYa5 SINE Alu -8 303 146 2254 84 3 0 chr5 77968065 77968351 -125117181 - AluSp SINE Alu -26 287 1 849 154 178 0 chr5 77968351 77968520 -125117012 - L1MB7 LINE L1 -1763 5194 4996 244 171 0 0 chr5 77968520 77968554 -125116978 - MLT1C LTR MaLR 0 467 434 387 118 0 0 chr5 77968554 77968605 -125116927 - Tigger5 DNA MER2_type 0 2323 2273 2355 93 0 10 chr5 77968613 77968915 -125116617 - AluSx SINE Alu -13 299 1 1674 238 36 19 chr5 77968950 77969415 -125116117 - MLT1C LTR MaLR -33 593 8 741 201 21 0 chr5 77969422 77969566 -125115966 - L1MB7 LINE L1 -1961 4996 4850 1491 154 54 29 chr5 77969968 77970248 -125115284 + AluJo SINE Alu 3 289 -23 2294 98 0 25 chr5 77970257 77970575 -125114957 + AluSg SINE Alu 1 310 0 1294 226 107 0 chr5 77971355 77971692 -125113840 - L1MB7 LINE L1 -2098 4859 4487 822 251 104 18 chr5 77971735 77972014 -125113518 - L1MB7 LINE L1 -6543 316 14 2229 112 0 0 chr5 77973742 77974036 -125111496 - AluSq SINE Alu -19 294 1 1888 153 3 3 chr5 77974064 77974351 -125111181 + AluJb SINE Alu 1 287 -25 252 100 0 0 chr5 77975903 77975943 -125109589 + (TC)n Simple_repeat Simple_repeat 1 40 0 1061 140 70 79 chr5 77975945 77976002 -125109530 - Tigger2 DNA MER2_type -1 2717 2661 623 122 194 0 chr5 77976002 77976100 -125109432 + FLAM_C SINE Alu 1 117 -16 1061 140 70 79 chr5 77976100 77976114 -125109418 - Tigger2 DNA MER2_type -57 2661 2648 186 103 0 0 chr5 77976114 77976143 -125109389 + (TA)n Simple_repeat Simple_repeat 1 29 0 1061 140 70 79 chr5 77976143 77976284 -125109248 - Tigger2 DNA MER2_type -70 2648 2506 229 61 0 212 chr5 77976385 77976422 -125109110 - Tigger2 DNA MER2_type -204 2514 2471 1690 189 23 3 chr5 77976422 77976724 -125108808 + AluJb SINE Alu 1 308 -4 1415 184 61 24 chr5 77976727 77977021 -125108511 + AluJb SINE Alu 1 305 -7 229 61 0 212 chr5 77977021 77977045 -125108487 - Tigger2 DNA MER2_type -249 2469 2463 1367 162 42 0 chr5 77977105 77977321 -125108211 - Tigger2 DNA MER2_type -1965 753 529 2609 55 0 3 chr5 77978014 77978324 -125107208 + AluY SINE Alu 1 309 -2 301 127 164 172 chr5 77978701 77978744 -125106788 - L1ME1 LINE L1 -12 6154 6112 1925 163 10 0 chr5 77978744 77979051 -125106481 - AluSx SINE Alu -2 310 1 301 127 164 172 chr5 77979051 77979141 -125106391 - L1ME1 LINE L1 -54 6112 6022 1003 144 30 0 chr5 77979261 77979428 -125106104 + AluJb SINE Alu 121 292 -20 227 328 66 8 chr5 77979435 77979557 -125105975 - L2 LINE L2 -412 2902 2774 1820 261 84 50 chr5 77979608 77979758 -125105774 - L1MC4 LINE L1 0 8042 7899 2230 115 3 6 chr5 77979758 77980071 -125105461 + AluSx SINE Alu 1 312 0 1820 261 84 50 chr5 77980071 77980268 -125105264 - L1MC4 LINE L1 -143 7899 7710 2150 123 0 23 chr5 77980268 77980569 -125104963 - AluSx SINE Alu -18 294 1 1820 261 84 50 chr5 77980569 77981072 -125104460 - L1MC4 LINE L1 -332 7710 7162 2092 92 11 28 chr5 77981085 77981400 -125104132 + AluSc SINE Alu 1 310 0 1480 147 0 25 chr5 77981417 77981655 -125103877 + AluJb SINE Alu 1 232 -80 1851 113 4 0 chr5 77982407 77982654 -125102878 + AluSx SINE Alu 35 282 -30 1307 160 6 123 chr5 77983400 77983520 -125102012 - AluJo SINE Alu -19 293 161 1939 136 31 0 chr5 77983520 77983806 -125101726 + AluSx SINE Alu 1 295 -17 1307 160 6 123 chr5 77983806 77984017 -125101515 - AluJo SINE Alu -151 161 1 2131 113 7 3 chr5 77984128 77984419 -125101113 - AluSx SINE Alu -18 294 3 286 74 37 0 chr5 77984486 77984540 -125100992 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 6128 78 25 29 chr5 77984543 77986307 -125099225 - SVA Other Other -555 1366 11 435 252 65 22 chr5 77987009 77987148 -125098384 + MIR SINE MIR 12 156 -106 180 0 0 0 chr5 77987148 77987168 -125098364 + (CAT)n Simple_repeat Simple_repeat 2 21 0 321 302 220 6 chr5 77987175 77987357 -125098175 + L2 LINE L2 2750 2970 -344 602 221 83 31 chr5 77987612 77987900 -125097632 - L1MC/D LINE L1 -748 5398 5154 271 213 31 71 chr5 77987898 77988025 -125097507 - L1MC5 LINE L1 -32 7929 7808 * 1419 132 29 70 chr5 77988241 77988484 -125097048 - MER46A DNA MER2_type -3 233 1 625 285 82 52 chr5 77988661 77988882 -125096650 - L1MC/D LINE L1 -1169 4977 4764 2324 97 3 7 chr5 77988882 77989192 -125096340 - AluSp SINE Alu -4 309 1 625 285 82 52 chr5 77989192 77990080 -125095452 - L1MC/D LINE L1 -1382 4764 3764 24 53 0 0 chr5 77990298 77990336 -125095196 + AT_rich Low_complexity Low_complexity 1 38 0 1741 156 7 14 chr5 77990679 77990827 -125094705 - AluJb SINE Alu -31 281 134 2182 68 0 0 chr5 77990827 77991091 -125094441 - AluY SINE Alu 0 311 48 1741 156 7 14 chr5 77991091 77991217 -125094315 - AluJb SINE Alu -178 134 9 2011 109 53 3 chr5 77991640 77991925 -125093607 + AluSx SINE Alu 1 299 -13 2499 84 0 0 chr5 77991930 77992241 -125093291 + AluSq SINE Alu 1 311 -2 2167 132 0 0 chr5 77992257 77992560 -125092972 + AluSx SINE Alu 1 303 -9 995 130 130 0 chr5 77994350 77994504 -125091028 + FAM SINE Alu 2 175 0 2279 90 10 7 chr5 77994504 77994805 -125090727 + AluSp SINE Alu 1 302 -11 899 274 27 5 chr5 77994859 77995078 -125090454 - MER58A DNA MER1_type 0 224 1 325 273 23 0 chr5 77995094 77995182 -125090350 + MER5A DNA MER1_type 9 98 -91 471 184 0 23 chr5 77995233 77995320 -125090212 - FLAM_C SINE Alu -22 121 37 1116 73 8 2 chr5 77995347 77995608 -125089924 + AluSg SINE Alu 1 310 -2 1802 159 36 13 chr5 77996517 77996818 -125088714 - AluSx SINE Alu -4 308 1 500 236 98 88 chr5 77996821 77997012 -125088520 - L1M4 LINE L1 -865 5281 5093 1958 135 52 0 chr5 77997012 77997301 -125088231 + AluSx SINE Alu 1 304 -8 500 236 98 88 chr5 77997301 77997642 -125087890 - L1M4 LINE L1 -1053 5093 4744 22 35 0 0 chr5 77997770 77997799 -125087733 + AT_rich Low_complexity Low_complexity 1 29 0 548 331 33 0 chr5 77997826 77998071 -125087461 - L1ME LINE L1 -330 5791 5539 1624 144 29 120 chr5 77998735 77999117 -125086415 + MER7A DNA MER2_type 1 345 -1 29 0 0 0 chr5 77999301 77999330 -125086202 + AT_rich Low_complexity Low_complexity 1 29 0 530 215 9 0 chr5 77999962 78000069 -125085463 - MER58B DNA MER1_type -39 302 195 29 47 0 0 chr5 78001166 78001209 -125084323 + AT_rich Low_complexity Low_complexity 1 43 0 1759 173 0 11 chr5 78001250 78001534 -125083998 + AluJo SINE Alu 1 281 -31 428 333 49 15 chr5 78001566 78001852 -125083680 - HERVL LTR ERVL -2390 3264 2916 697 126 0 19 chr5 78001869 78001972 -125083560 - FRAM SINE Alu -23 153 53 629 325 71 26 chr5 78002028 78002480 -125083052 - HERVL LTR ERVL -2104 2892 2421 394 283 11 0 chr5 78002499 78002591 -125082941 + MER5B DNA MER1_type 1 93 -85 1373 143 198 28 chr5 78002594 78002846 -125082686 + AluJo SINE Alu 3 297 -5 1853 144 7 0 chr5 78002852 78003136 -125082396 + AluJb SINE Alu 1 286 -26 183 297 0 31 chr5 78003165 78003229 -125082303 + MER5B DNA MER1_type 99 160 -18 997 345 48 20 chr5 78003497 78004085 -125081447 - HERVL LTR ERVL -3644 2120 1517 710 123 16 8 chr5 78004409 78004531 -125081001 - MER2 DNA MER2_type -134 211 89 1757 168 3 13 chr5 78004531 78004835 -125080697 - AluJb SINE Alu -11 301 1 405 171 12 17 chr5 78004945 78005028 -125080504 - MER5A DNA MER1_type -18 171 80 1676 129 51 0 chr5 78005030 78005285 -125080247 - AluSq SINE Alu -17 296 29 2525 156 9 18 chr5 78005288 78005724 -125079808 + LTR3 LTR ERVK 1 432 0 23154 119 17 4 chr5 78005731 78006337 -125079195 + HERVK3 LTR ERVK 2 599 -6644 2420 100 3 0 chr5 78006337 78006648 -125078884 + AluSx SINE Alu 1 312 0 23154 119 17 4 chr5 78006648 78009400 -125076132 + HERVK3 LTR ERVK 599 3403 -3840 14317 99 3 3 chr5 78009392 78011304 -125074228 + HERVK3 LTR ERVK 5329 7241 -2 * 2400 141 17 24 chr5 78011306 78011726 -125073806 + LTR3 LTR ERVK 1 417 -15 252 125 25 0 chr5 78011747 78011787 -125073745 + HERVK3 LTR ERVK 2 42 -7201 611 211 16 0 chr5 78011810 78011933 -125073599 - MER5A DNA MER1_type -64 125 1 509 230 9 18 chr5 78011943 78012056 -125073476 - MER5B DNA MER1_type -4 174 63 515 166 115 0 chr5 78012057 78012071 -125073461 - L1MA10 LINE L1 0 6334 6321 586 232 67 84 chr5 78012071 78012365 -125073167 - L1ME1 LINE L1 -5 6161 5873 2320 104 0 0 chr5 78012365 78012672 -125072860 - AluSq SINE Alu -6 307 1 586 232 67 84 chr5 78012672 78012735 -125072797 - L1ME1 LINE L1 -293 5873 5810 870 162 7 0 chr5 78012914 78013050 -125072482 - FLAM_A SINE Alu 0 142 6 397 185 49 12 chr5 78013058 78013139 -125072393 - L1MD3 LINE L1 -20 7975 7892 1997 157 82 129 chr5 78013143 78013298 -125072234 + MER67C LTR ERV1 1 162 -548 2103 99 0 0 chr5 78013298 78013571 -125071961 - AluSc SINE Alu -36 273 1 1997 157 82 129 chr5 78013571 78013987 -125071545 + MER67C LTR ERV1 162 545 -165 720 120 0 0 chr5 78013989 78014081 -125071451 - AluSg/x SINE Alu -16 296 205 785 149 13 13 chr5 78014095 78014249 -125071283 + MER67C LTR ERV1 555 708 -2 480 139 58 0 chr5 78014250 78014336 -125071196 - L1MC4a LINE L1 -91 7717 7627 911 265 65 42 chr5 78014337 78014573 -125070959 + MER2 DNA MER2_type 1 249 -96 1841 141 21 7 chr5 78014573 78014863 -125070669 - AluJb SINE Alu -18 294 1 911 265 65 42 chr5 78014863 78014962 -125070570 + MER2 DNA MER2_type 249 344 -1 839 196 138 27 chr5 78014982 78015162 -125070370 - L1MD2 LINE L1 -211 6148 5937 1399 163 89 35 chr5 78015162 78015444 -125070088 - AluJb SINE Alu -15 297 1 839 196 138 27 chr5 78015444 78015488 -125070044 - L1MD2 LINE L1 -422 5937 5899 929 135 96 39 chr5 78015488 78015666 -125069866 + MER77 LTR ERV1 3 190 -415 679 138 46 0 chr5 78015656 78015765 -125069767 + MER77 LTR ERV1 478 591 -14 * 1600 164 66 7 chr5 78015802 78016089 -125069443 - AluJo SINE Alu -4 308 5 738 242 6 0 chr5 78016093 78016275 -125069257 - L1MD2 LINE L1 -348 5818 5636 256 344 11 0 chr5 78016595 78016688 -125068844 + ERVL LTR ERVL 814 907 -4857 666 194 245 0 chr5 78016875 78017030 -125068502 + MLT1G1 LTR MaLR 13 205 -390 261 261 43 0 chr5 78017342 78017434 -125068098 - L2 LINE L2 -212 3060 2965 21 36 0 0 chr5 78017617 78017645 -125067887 + AT_rich Low_complexity Low_complexity 1 28 0 2513 58 0 0 chr5 78017645 78017960 -125067572 + AluY SINE Alu 1 311 0 1210 191 29 4 chr5 78017975 78018216 -125067316 - AluJo SINE Alu -1 311 65 2231 122 0 3 chr5 78018445 78018749 -125066783 - AluSx SINE Alu -9 303 1 1662 144 92 0 chr5 78019417 78019701 -125065831 + AluJb SINE Alu 2 311 -1 2530 160 118 53 chr5 78019835 78020422 -125065110 - MER51A LTR ERV1 -9 625 1 197 284 142 43 chr5 78021136 78021298 -125064234 - MER5B DNA MER1_type 0 178 1 2404 83 3 0 chr5 78021362 78021663 -125063869 + AluSq SINE Alu 1 302 -11 318 317 60 20 chr5 78022788 78022987 -125062545 - MLT1I LTR MaLR -101 308 102 615 294 61 31 chr5 78023081 78023309 -125062223 - MIR SINE MIR -26 236 2 222 62 0 0 chr5 78023483 78023515 -125062017 + (CA)n Simple_repeat Simple_repeat 2 33 0 1122 207 7 58 chr5 78023781 78023907 -125061625 - L1M4 LINE L1 -3241 2905 2774 2205 88 10 3 chr5 78023907 78024202 -125061330 + AluSx SINE Alu 1 297 -15 1122 207 7 58 chr5 78024202 78024370 -125061162 - L1M4 LINE L1 -3372 2774 2626 2341 83 3 10 chr5 78024796 78025109 -125060423 - AluSp SINE Alu -2 311 1 1435 162 34 88 chr5 78025112 78025440 -125060092 - AluJo SINE Alu -2 310 1 2253 121 0 6 chr5 78025471 78025785 -125059747 + AluSx SINE Alu 1 312 0 2117 123 0 7 chr5 78026462 78026762 -125058770 - AluSx SINE Alu -14 298 1 35 24 0 0 chr5 78026893 78026935 -125058597 + AT_rich Low_complexity Low_complexity 1 42 0 769 144 24 0 chr5 78026935 78027060 -125058472 - FLAM_C SINE Alu -5 128 1 576 173 0 29 chr5 78027314 78027418 -125058114 - FLAM_A SINE Alu -19 123 23 2374 94 3 0 chr5 78027619 78027917 -125057615 + AluSx SINE Alu 1 299 -13 2202 106 0 7 chr5 78028270 78028563 -125056969 - AluSx SINE Alu -11 301 11 1517 168 51 4 chr5 78028566 78028822 -125056710 + AluJo SINE Alu 35 302 -10 236 171 0 0 chr5 78029851 78029892 -125055640 - L2 LINE L2 -12 3301 3261 1560 227 54 55 chr5 78029900 78030035 -125055497 - L2 LINE L2 -17 3296 3162 2258 99 3 0 chr5 78030035 78030327 -125055205 + AluY SINE Alu 1 293 -18 1560 227 54 55 chr5 78030327 78031051 -125054481 - L2 LINE L2 -151 3162 2438 296 235 54 66 chr5 78031069 78031235 -125054297 - L1ME4a LINE L1 -103 6018 5855 777 218 28 11 chr5 78031256 78031435 -125054097 + MIR SINE MIR 12 193 -69 2398 78 7 0 chr5 78031440 78031736 -125053796 - AluSc SINE Alu -6 303 6 2023 109 3 56 chr5 78031831 78032135 -125053397 - AluSx SINE Alu -24 288 1 1669 172 3 31 chr5 78032143 78032434 -125053098 - AluJb SINE Alu -24 288 6 2338 97 0 7 chr5 78032467 78032776 -125052756 + AluSx SINE Alu 1 307 -5 662 205 0 0 chr5 78032776 78032888 -125052644 - FLAM_A SINE Alu -18 115 4 2266 98 7 0 chr5 78033265 78033561 -125051971 + AluSx SINE Alu 1 298 -14 514 143 0 0 chr5 78033700 78033784 -125051748 - FLAM_A SINE Alu 0 142 59 916 199 0 0 chr5 78033813 78033964 -125051568 - FRAM SINE Alu -18 158 8 603 264 90 62 chr5 78034021 78034309 -125051223 - MLT1K LTR MaLR 0 588 293 380 329 93 6 chr5 78034356 78034517 -125051015 - MLT1K LTR MaLR -404 184 10 281 293 0 30 chr5 78034592 78034691 -125050841 - MIR SINE MIR -147 115 20 2459 69 0 13 chr5 78036514 78036820 -125048712 + AluY SINE Alu 3 304 -7 327 339 60 6 chr5 78037139 78037307 -125048225 - MIR SINE MIR -37 225 49 43298 33 25 1 chr5 78037961 78043972 -125041560 - L1PA2 LINE L1 0 6155 2 2228 102 0 3 chr5 78044083 78044377 -125041155 + AluSc SINE Alu 1 293 -16 341 271 39 58 chr5 78044418 78044497 -125041035 + L1MC/D LINE L1 5620 5696 -2112 1895 157 7 10 chr5 78044497 78044802 -125040730 + AluJo SINE Alu 1 304 -8 341 271 39 58 chr5 78044802 78044877 -125040655 + L1MC/D LINE L1 5696 5771 -2037 2427 69 0 50 chr5 78045162 78045482 -125040050 - AluY SINE Alu -7 304 1 764 154 8 15 chr5 78045905 78046035 -125039497 - FLAM_C SINE Alu -4 129 1 412 117 0 17 chr5 78046064 78046124 -125039408 - MLT1C LTR MaLR -2 465 407 531 237 15 15 chr5 78046125 78046260 -125039272 - AluJo SINE Alu -177 135 1 769 247 99 25 chr5 78046260 78046610 -125038922 - MLT1C LTR MaLR -56 411 24 24 32 0 0 chr5 78046860 78046891 -125038641 + AT_rich Low_complexity Low_complexity 1 31 0 919 162 18 2 chr5 78046893 78047121 -125038411 + AluJb SINE Alu 2 289 -23 24 0 0 0 chr5 78047126 78047150 -125038382 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr5 78047408 78047441 -125038091 + (CA)n Simple_repeat Simple_repeat 2 34 0 651 170 9 9 chr5 78047754 78047866 -125037666 + FLAM_C SINE Alu 6 117 -26 2144 117 3 10 chr5 78047875 78048175 -125037357 - AluSx SINE Alu -14 298 1 2093 137 0 7 chr5 78048361 78048660 -125036872 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 78048839 78048860 -125036672 + AT_rich Low_complexity Low_complexity 1 21 0 320 291 0 13 chr5 78048998 78049077 -125036455 + MER21B LTR ERV1 12 89 -774 3359 201 95 17 chr5 78049184 78049966 -125035566 + MER21B LTR ERV1 21 863 0 1033 189 206 65 chr5 78051561 78051852 -125033680 + MSTD LTR MaLR 8 339 -57 713 70 10 0 chr5 78051855 78051955 -125033577 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 691 188 51 0 chr5 78051960 78052077 -125033455 - FLAM_C SINE Alu -19 124 2 460 114 14 0 chr5 78052078 78052148 -125033384 + MSTD LTR MaLR 358 428 0 1971 149 0 10 chr5 78052641 78052937 -125032595 - AluJb SINE Alu -7 305 13 782 167 8 0 chr5 78052958 78053090 -125032442 - FLAM_A SINE Alu 0 133 1 2251 82 32 0 chr5 78053114 78053396 -125032136 + AluY SINE Alu 4 294 -17 26 0 0 0 chr5 78053767 78053793 -125031739 + AT_rich Low_complexity Low_complexity 1 26 0 605 185 67 15 chr5 78054617 78054752 -125030780 + FLAM_C SINE Alu 1 142 -1 967 142 77 0 chr5 78054838 78054993 -125030539 + AluJb SINE Alu 133 299 -13 22 0 0 0 chr5 78055054 78055076 -125030456 + AT_rich Low_complexity Low_complexity 1 22 0 1803 114 15 4 chr5 78055120 78055391 -125030141 + L1MA1 LINE L1 5980 6253 -49 627 138 0 0 chr5 78055393 78055487 -125030045 + AluJ/FLAM SINE Alu 2 95 -217 365 52 52 0 chr5 78055678 78055736 -125029796 + L1MA3 LINE L1 6245 6305 0 1602 130 106 14 chr5 78055817 78056109 -125029423 - L1MB8 LINE L1 0 6178 5860 512 207 0 0 chr5 78056109 78056196 -125029336 - FLAM_A SINE Alu -55 87 1 849 51 0 0 chr5 78056220 78056318 -125029214 + AluY SINE Alu 4 101 -210 1208 239 138 67 chr5 78056579 78057131 -125028401 - MLT1E LTR MaLR 0 593 3 1270 199 93 42 chr5 78057345 78057701 -125027831 - MLT1A2 LTR MaLR 0 374 1 2398 83 7 0 chr5 78057763 78058065 -125027467 - AluSp SINE Alu -5 308 5 2207 129 3 0 chr5 78058074 78058385 -125027147 - AluSx SINE Alu 0 312 1 261 296 62 34 chr5 78058895 78059071 -125026461 - L1MB8 LINE L1 -2053 5755 5575 22 56 0 0 chr5 78059288 78059324 -125026208 + AT_rich Low_complexity Low_complexity 1 36 0 333 225 77 0 chr5 78059414 78059507 -125026025 - L1MC5 LINE L1 0 7995 7840 2955 182 44 12 chr5 78060234 78060826 -125024706 - L1MB3 LINE L1 -8 6175 5565 2714 166 35 20 chr5 78060829 78061225 -125024307 - L1M4 LINE L1 -371 5807 5418 2388 95 0 16 chr5 78061225 78061542 -125023990 - AluSx SINE Alu 0 312 1 2714 166 35 20 chr5 78061542 78062062 -125023470 - L1M4 LINE L1 -760 5418 4869 2156 138 7 0 chr5 78062322 78062627 -125022905 + AluSx SINE Alu 1 307 -5 1535 148 20 30 chr5 78062627 78062924 -125022608 + L1MB7 LINE L1 5891 6184 0 276 30 0 0 chr5 78063133 78063166 -125022366 + (TTA)n Simple_repeat Simple_repeat 2 34 0 196 315 55 0 chr5 78064550 78064623 -125020909 - L2 LINE L2 -62 3210 3134 291 301 53 8 chr5 78064732 78064865 -125020667 - L2 LINE L2 -208 3064 2926 2781 13 23 0 chr5 78064923 78065228 -125020304 - AluYb8 SINE Alu -6 312 1 223 308 67 17 chr5 78065229 78065349 -125020183 + MIR SINE MIR 28 153 -109 447 286 84 0 chr5 78065789 78065908 -125019624 - L2 LINE L2 -2 3270 3142 922 248 15 5 chr5 78066015 78066213 -125019319 + MER63A DNA MER1_type 5 204 -6 258 246 32 79 chr5 78066245 78066371 -125019161 + MIR SINE MIR 143 262 0 189 0 0 0 chr5 78066479 78066500 -125019032 + (TA)n Simple_repeat Simple_repeat 1 21 0 800 186 0 8 chr5 78066500 78066629 -125018903 - FLAM_C SINE Alu -13 130 3 367 284 135 7 chr5 78066677 78066825 -125018707 + MIR SINE MIR 2 168 -94 237 318 80 36 chr5 78067996 78068156 -125017376 + MIR SINE MIR 10 186 -60 254 231 132 0 chr5 78069246 78069337 -125016195 - L1ME4a LINE L1 -9 6112 6010 247 234 94 23 chr5 78069372 78069500 -125016032 - L1ME4a LINE L1 -177 5944 5808 216 268 0 18 chr5 78069511 78069567 -125015965 + L2 LINE L2 3255 3309 -4 1961 135 26 13 chr5 78069792 78070118 -125015414 + AluSx SINE Alu 1 312 0 1769 101 0 0 chr5 78070179 78070406 -125015126 - AluSq SINE Alu -86 227 1 10718 118 54 30 chr5 78070645 78071087 -125014445 - Tigger1 DNA MER2_type 0 2418 1988 2179 94 21 0 chr5 78071087 78071374 -125014158 - AluY SINE Alu -18 293 1 10718 118 54 30 chr5 78071374 78071888 -125013644 - Tigger1 DNA MER2_type -430 1988 1488 2384 98 0 0 chr5 78071888 78072183 -125013349 - AluSx SINE Alu -17 295 1 10718 118 54 30 chr5 78072183 78072968 -125012564 - Tigger1 DNA MER2_type -930 1488 634 218 224 0 51 chr5 78073617 78073715 -125011817 + T-rich Low_complexity Low_complexity 2 94 0 192 247 96 0 chr5 78073762 78073835 -125011697 - MIR SINE MIR -122 140 61 399 273 70 8 chr5 78073909 78074037 -125011495 - MIR3 SINE MIR -61 147 12 268 333 0 28 chr5 78075552 78075693 -125009839 + GA-rich Low_complexity Low_complexity 4 140 0 965 156 0 19 chr5 78076209 78076369 -125009163 + AluJb SINE Alu 131 287 -25 1984 139 3 17 chr5 78076462 78076757 -125008775 + AluJo SINE Alu 1 291 -21 22 56 0 0 chr5 78076815 78076851 -125008681 + AT_rich Low_complexity Low_complexity 1 36 0 204 240 20 0 chr5 78076859 78076909 -125008623 + L2 LINE L2 3263 3313 0 501 141 0 0 chr5 78077381 78077466 -125008066 + (TG)n Simple_repeat Simple_repeat 2 86 0 29 0 0 0 chr5 78077819 78077848 -125007684 + AT_rich Low_complexity Low_complexity 1 29 0 1219 125 0 27 chr5 78079278 78079462 -125006070 + FRAM SINE Alu 1 176 0 335 185 15 0 chr5 78079700 78079765 -125005767 - MER3 DNA MER1_type -137 72 7 989 152 12 35 chr5 78079850 78080021 -125005511 - AluJb SINE Alu -134 178 12 189 301 147 64 chr5 78080307 78080463 -125005069 + MIR3 SINE MIR 38 206 -2 180 0 0 0 chr5 78080900 78080920 -125004612 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 480 291 109 18 chr5 78080933 78081153 -125004379 - L2 LINE L2 -954 2360 2121 758 179 0 22 chr5 78082047 78082181 -125003351 - FLAM_C SINE Alu -2 131 1 604 289 84 14 chr5 78082796 78083233 -125002299 + L1M4 LINE L1 2899 3389 -2757 375 261 108 18 chr5 78083241 78083352 -125002180 - MER5B DNA MER1_type -56 122 2 2089 115 19 25 chr5 78083814 78083997 -125001535 - AluSx SINE Alu 0 312 130 2333 78 0 3 chr5 78083997 78084314 -125001218 - AluY SINE Alu 0 311 1 2089 115 19 25 chr5 78084314 78084444 -125001088 - AluSx SINE Alu -182 130 1 1978 154 3 7 chr5 78086933 78087238 -124998294 + AluJb SINE Alu 1 304 -8 1908 132 21 7 chr5 78087359 78087648 -124997884 - AluJb SINE Alu -9 303 11 2443 68 17 0 chr5 78088202 78088498 -124997034 - AluSp SINE Alu -12 301 1 2134 106 0 17 chr5 78089296 78089588 -124995944 + AluSx SINE Alu 1 287 -25 575 188 14 42 chr5 78090710 78090854 -124994678 - L1MB3 LINE L1 -67 6116 5977 2131 123 0 0 chr5 78090868 78091160 -124994372 - AluSx SINE Alu -20 292 1 340 303 21 14 chr5 78091208 78091353 -124994179 + L2 LINE L2 2174 2319 -995 574 307 155 55 chr5 78091391 78092026 -124993506 + L2 LINE L2 2562 3271 -1 24 32 0 0 chr5 78092282 78092313 -124993219 + AT_rich Low_complexity Low_complexity 1 31 0 894 146 0 0 chr5 78092490 78092613 -124992919 - FLAM_A SINE Alu -10 123 1 788 142 0 8 chr5 78093329 78093449 -124992083 + FLAM_C SINE Alu 1 119 -24 246 62 0 0 chr5 78093451 78093483 -124992049 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 392 268 24 39 chr5 78093615 78093742 -124991790 + MER94 DNA DNA 6 130 -4 1739 160 3 42 chr5 78094169 78094475 -124991057 - AluJb SINE Alu -18 294 1 811 259 96 39 chr5 78094689 78094947 -124990585 - L1ME4a LINE L1 -15 6106 5864 2416 91 0 0 chr5 78094947 78095243 -124990289 - AluSx SINE Alu -16 296 1 811 259 96 39 chr5 78095243 78095452 -124990080 - L1ME4a LINE L1 -257 5864 5612 2073 117 3 24 chr5 78095642 78095940 -124989592 + AluJb SINE Alu 5 296 -16 193 270 95 14 chr5 78096015 78096089 -124989443 + MIR SINE MIR 17 96 -112 182 200 0 25 chr5 78096381 78096421 -124989111 - MIR SINE MIR -3 259 221 230 281 62 55 chr5 78096522 78096650 -124988882 + MLT1K LTR MaLR 43 171 -417 828 168 42 0 chr5 78097108 78097251 -124988281 - FRAM SINE Alu -28 148 1 483 151 139 0 chr5 78097506 78097592 -124987940 - AluJ/FLAM SINE Alu -213 99 2 448 178 0 0 chr5 78097594 78097667 -124987865 - MER5A DNA MER1_type -114 75 3 196 211 19 19 chr5 78097671 78097723 -124987809 + MIR3 SINE MIR 155 206 -2 734 233 5 69 chr5 78097848 78097912 -124987620 + MER5B DNA MER1_type 1 68 -110 2207 118 0 19 chr5 78097912 78098227 -124987305 + AluSc SINE Alu 1 309 0 734 233 5 69 chr5 78098227 78098351 -124987181 + MER5B DNA MER1_type 68 177 -1 1811 174 0 3 chr5 78098815 78099170 -124986362 + AluSx SINE Alu 1 354 0 2359 65 0 7 chr5 78099221 78099513 -124986019 - AluY SINE Alu -21 290 1 2050 145 12 21 chr5 78099522 78099859 -124985673 - L1MB4 LINE L1 0 6180 5847 452 302 98 14 chr5 78100031 78100246 -124985286 + L2 LINE L2 2414 2646 -668 549 355 13 22 chr5 78100441 78100672 -124984860 + L3 LINE CR1 729 957 -620 795 108 43 32 chr5 78100704 78100959 -124984573 + CT-rich Low_complexity Low_complexity 1 257 0 2036 134 7 0 chr5 78100976 78101267 -124984265 - AluSx SINE Alu -19 293 1 521 184 224 0 chr5 78101278 78101376 -124984156 - FLAM_A SINE Alu -13 120 1 356 285 127 32 chr5 78101376 78101525 -124984007 + L3 LINE CR1 972 1135 -442 204 267 0 89 chr5 78101525 78101626 -124983906 - MER5A DNA MER1_type 0 189 98 208 284 45 0 chr5 78101692 78101780 -124983752 + L3 LINE CR1 1190 1281 -296 2479 50 0 7 chr5 78101847 78102147 -124983385 + AluY SINE Alu 4 301 -10 2366 103 0 0 chr5 78102297 78102598 -124982934 + AluSg SINE Alu 1 301 -9 319 286 24 0 chr5 78102603 78102687 -124982845 - MER5A DNA MER1_type -83 106 21 188 388 43 9 chr5 78102924 78103040 -124982492 + MIR SINE MIR 19 138 -124 1170 182 70 5 chr5 78103104 78103318 -124982214 - AluJo SINE Alu -84 228 1 734 284 122 6 chr5 78103904 78104249 -124981283 + MLT1L LTR MaLR 230 614 -1 723 213 0 0 chr5 78104479 78104601 -124980931 - FLAM_A SINE Alu -11 122 1 225 217 22 0 chr5 78104715 78104761 -124980771 + CT-rich Low_complexity Low_complexity 2 48 0 186 273 17 97 chr5 78105301 78105477 -124980055 + L2 LINE L2 2625 2786 -528 9388 173 64 65 chr5 78105639 78108224 -124977308 - L1MA3 LINE L1 0 6305 3718 243 0 0 0 chr5 78108224 78108251 -124977281 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 707 196 0 0 chr5 78108261 78108373 -124977159 - FLAM_C SINE Alu -31 112 1 2123 64 0 48 chr5 78108376 78108835 -124976697 - AluY SINE Alu 0 445 1 9388 173 64 65 chr5 78108835 78109465 -124976067 - L1MA3 LINE L1 -2598 3707 3078 1230 163 0 5 chr5 78109465 78109661 -124975871 + AluJo SINE Alu 1 195 -117 9388 173 64 65 chr5 78109661 78110156 -124975376 - L1MA3 LINE L1 -3227 3078 2350 247 306 129 16 chr5 78110156 78110349 -124975183 - HAL1 LINE L1 -114 2393 2179 330 115 0 0 chr5 78110702 78110754 -124974778 + (CA)n Simple_repeat Simple_repeat 1 52 0 358 275 168 7 chr5 78110894 78111043 -124974489 + ERVL LTR ERVL 526 698 -5066 1611 246 92 68 chr5 78111206 78111925 -124973607 + ERVL LTR ERVL 2307 3042 -2722 273 146 0 0 chr5 78112188 78112236 -124973296 + (TG)n Simple_repeat Simple_repeat 1 48 0 1128 147 35 0 chr5 78112261 78112431 -124973101 - AluJo SINE Alu -31 281 106 1812 138 45 4 chr5 78112561 78112830 -124972702 - AluSg SINE Alu -13 297 18 259 95 119 0 chr5 78112834 78112876 -124972656 - Alu SINE Alu -236 64 18 799 257 73 33 chr5 78112876 78113176 -124972356 + LTR16C LTR ERVL 174 485 -6 245 311 36 46 chr5 78113211 78113407 -124972125 - HAL1 LINE L1 -2299 208 15 382 336 210 16 chr5 78113415 78113796 -124971736 + L2 LINE L2 2818 3272 0 1935 145 3 14 chr5 78114159 78114456 -124971076 + AluJo SINE Alu 1 294 -18 509 178 0 47 chr5 78114458 78114565 -124970967 + MIR SINE MIR 35 136 -126 1383 225 83 40 chr5 78115533 78116027 -124969505 - L1MEc LINE L1 -4235 2161 1647 208 151 57 0 chr5 78116087 78116140 -124969392 + (TA)n Simple_repeat Simple_repeat 2 57 0 1742 155 3 75 chr5 78116288 78116650 -124968882 + AluJb SINE Alu 1 312 0 601 104 83 0 chr5 78116898 78116994 -124968538 + FRAM SINE Alu 55 158 -18 13814 173 63 10 chr5 78117018 78123521 -124962011 + L1PB1 LINE L1 6 6853 -14 391 314 89 0 chr5 78124049 78124240 -124961292 - L1MEc LINE L1 -4751 1464 1257 652 260 62 71 chr5 78124248 78124597 -124960935 - L1MEc LINE L1 -4963 1357 1006 333 0 0 0 chr5 78124597 78124634 -124960898 + (TG)n Simple_repeat Simple_repeat 2 38 0 652 260 62 71 chr5 78124634 78124675 -124960857 - L1MEc LINE L1 -5314 1006 966 1584 171 4 25 chr5 78124675 78124955 -124960577 + AluJb SINE Alu 1 274 -38 652 260 62 71 chr5 78124955 78125081 -124960451 - L1MEc LINE L1 -5354 966 887 2495 83 0 6 chr5 78125081 78125395 -124960137 - AluSq SINE Alu -1 312 1 652 260 62 71 chr5 78125395 78125497 -124960035 - L1MEc LINE L1 -5433 887 786 650 106 0 0 chr5 78125790 78125884 -124959648 + L1PB1 LINE L1 6050 6143 -8 233 22 87 0 chr5 78125913 78125959 -124959573 + (TAA)n Simple_repeat Simple_repeat 2 51 0 213 258 89 48 chr5 78126507 78126631 -124958901 + L2 LINE L2 3082 3210 -103 950 203 12 0 chr5 78126853 78127016 -124958516 - FAM SINE Alu -10 165 1 1532 153 15 0 chr5 78127218 78127486 -124958046 - L1MB2 LINE L1 -9 6162 5891 377 306 140 7 chr5 78127587 78127881 -124957651 - L1MEc LINE L1 -5968 428 62 497 291 138 5 chr5 78128030 78128219 -124957313 - MIR SINE MIR -20 242 29 981 173 56 5 chr5 78128324 78128538 -124956994 - L1MA8 LINE L1 -10 6281 6057 237 200 0 0 chr5 78128930 78128980 -124956552 - LTR67 LTR ERVL -491 66 17 306 299 0 66 chr5 78129275 78129412 -124956120 - MIR SINE MIR -27 235 108 911 224 34 38 chr5 78129847 78130110 -124955422 + MIR SINE MIR 1 262 0 275 244 76 7 chr5 78130304 78130443 -124955089 - L1MC/D LINE L1 -408 5753 5676 33 66 0 0 chr5 78130779 78130840 -124954692 + AT_rich Low_complexity Low_complexity 1 61 0 185 316 41 31 chr5 78131194 78131292 -124954240 - L3b LINE CR1 -90 1493 1395 2022 106 0 25 chr5 78132024 78132306 -124953226 - AluSx SINE Alu -37 275 1 1964 134 0 41 chr5 78132434 78132748 -124952784 + AluJo SINE Alu 1 301 -11 195 306 83 14 chr5 78133371 78133443 -124952089 + MIR SINE MIR 13 89 -173 712 233 83 33 chr5 78134000 78134052 -124951480 + MIR SINE MIR 9 57 -205 2072 131 16 49 chr5 78134052 78134440 -124951092 - THE1C LTR MaLR 0 375 1 712 233 83 33 chr5 78134440 78134567 -124950965 + MIR SINE MIR 57 197 -65 373 235 141 59 chr5 78135361 78135474 -124950058 + MIR SINE MIR 58 191 -71 783 130 0 30 chr5 78135474 78135605 -124949927 + FLAM_C SINE Alu 1 127 -6 373 235 141 59 chr5 78135605 78135661 -124949871 + MIR SINE MIR 191 241 -21 2252 121 0 3 chr5 78136819 78137132 -124948400 + AluSx SINE Alu 1 312 0 269 312 139 17 chr5 78137382 78137555 -124947977 - L2 LINE L2 -469 2845 2652 304 293 52 9 chr5 78138780 78138896 -124946636 - MIR SINE MIR -71 191 71 225 229 42 52 chr5 78139334 78139430 -124946102 + Charlie8 DNA MER1_type 74 168 -2249 472 232 35 56 chr5 78139608 78139750 -124945782 + MER5B DNA MER1_type 34 172 -6 193 200 256 24 chr5 78140876 78141001 -124944531 + MIR SINE MIR 40 193 -69 499 187 0 22 chr5 78141179 78141270 -124944262 - AluJ/FLAM SINE Alu -211 101 13 215 356 67 0 chr5 78141647 78141737 -124943795 + MIR SINE MIR 46 141 -67 1015 256 96 66 chr5 78141826 78142400 -124943132 + MLT1E LTR MaLR 2 592 -1 1203 279 31 28 chr5 78142419 78142810 -124942722 - MLT1I LTR MaLR 0 409 18 184 263 0 126 chr5 78143821 78143916 -124941616 - L3 LINE CR1 -4 1573 1491 337 374 47 0 chr5 78144433 78144540 -124940992 - L2 LINE L2 -40 3232 3121 21 0 0 0 chr5 78145075 78145096 -124940436 + AT_rich Low_complexity Low_complexity 1 21 0 2087 114 0 0 chr5 78146456 78146783 -124938749 + AluSg SINE Alu 1 327 0 1771 159 3 42 chr5 78147781 78148089 -124937443 - AluJb SINE Alu -16 296 1 226 180 20 0 chr5 78148443 78148493 -124937039 + MADE1 DNA Mariner 30 80 0 6026 112 12 2 chr5 78148878 78150170 -124935362 + L1MA1 LINE L1 4850 6152 -150 310 319 97 68 chr5 78150847 78151289 -124934243 - L1M2 LINE L1 -5444 1405 951 549 245 150 126 chr5 78151411 78151904 -124933628 + L2 LINE L2 1773 2277 -1037 268 339 39 16 chr5 78153359 78153486 -124932046 + MIR SINE MIR 20 149 -113 303 65 3 0 chr5 78153754 78153799 -124931733 + THE1A LTR MaLR 17 55 -300 4600 95 41 0 chr5 78153799 78154483 -124931049 + THE1A-int LTR MaLR 863 1574 -6 1977 110 13 3 chr5 78154488 78154789 -124930743 + THE1A LTR MaLR 1 304 -51 255 364 127 9 chr5 78155136 78155246 -124930286 + L2 LINE L2 3134 3256 -16 1838 186 31 10 chr5 78155408 78155795 -124929737 + MLT1C LTR MaLR 73 467 0 378 294 110 7 chr5 78155923 78156059 -124929473 - L2 LINE L2 -4 3309 3160 1183 286 71 29 chr5 78156161 78156398 -124929134 + L2 LINE L2 2505 2731 -582 2220 129 25 25 chr5 78156398 78156762 -124928770 - THE1B LTR MaLR 0 364 1 1183 286 71 29 chr5 78156762 78157198 -124928334 + L2 LINE L2 2731 3216 -97 3202 194 66 24 chr5 78157325 78158177 -124927355 + L1M4 LINE L1 4108 4995 -1151 642 151 8 56 chr5 78158178 78158304 -124927228 + FLAM_A SINE Alu 9 128 -14 455 143 101 42 chr5 78158306 78158425 -124927107 + L1M4 LINE L1 4987 5112 -1034 2876 170 4 2 chr5 78158527 78159063 -124926469 + L1 LINE L1 3763 4299 -1847 288 128 0 0 chr5 78159177 78159224 -124926308 + Tigger2 DNA MER2_type 4 50 -2668 659 266 29 6 chr5 78159291 78159464 -124926068 - MER8 DNA MER2_type -62 177 1 706 145 169 0 chr5 78159483 78159607 -124925925 + AluJb SINE Alu 3 147 -165 1087 162 36 40 chr5 78159776 78160023 -124925509 + L1MB8 LINE L1 5927 6172 -6 415 261 6 28 chr5 78160465 78160645 -124924887 - L1MEc LINE L1 -5241 1155 980 641 226 35 30 chr5 78160655 78160854 -124924678 - MER58C DNA MER1_type -15 200 1 562 294 39 39 chr5 78160886 78161301 -124924231 - L1MEc LINE L1 -5467 929 515 556 118 9 82 chr5 78161924 78162034 -124923498 - AluJo SINE Alu -176 136 35 1384 237 9 3 chr5 78162774 78163103 -124922429 + MER58B DNA MER1_type 2 332 -9 24 53 0 0 chr5 78163391 78163429 -124922103 + AT_rich Low_complexity Low_complexity 1 38 0 396 316 49 47 chr5 78163439 78163755 -124921777 - L1ME LINE L1 -526 5595 5280 21 0 0 0 chr5 78164451 78164472 -124921060 + AT_rich Low_complexity Low_complexity 1 21 0 187 103 0 0 chr5 78164603 78164632 -124920900 + L2 LINE L2 3025 3053 -219 306 286 61 0 chr5 78164668 78164766 -124920766 - L1ME4a LINE L1 0 6121 6018 2267 97 0 3 chr5 78164887 78165187 -124920345 + AluSx SINE Alu 1 299 -13 849 218 92 0 chr5 78165196 78165435 -124920097 + L1M4 LINE L1 2616 2876 -3270 6156 102 30 0 chr5 78165436 78166489 -124919043 - L1PA14 LINE L1 0 6161 5098 957 194 6 0 chr5 78166494 78166669 -124918863 + MSTB1 LTR MaLR 257 432 0 1594 246 10 5 chr5 78166669 78167076 -124918456 + L1M4 LINE L1 3719 4127 -2019 495 306 27 31 chr5 78167499 78167721 -124917811 + L2 LINE L2 3074 3294 -19 557 257 97 0 chr5 78169957 78170163 -124915369 - L1MC4a LINE L1 -1961 5847 5622 274 233 116 39 chr5 78170664 78170793 -124914739 + L1ME3A LINE L1 6008 6146 -24 616 243 17 11 chr5 78170980 78171161 -124914371 - L2 LINE L2 -679 2635 2454 1807 134 0 0 chr5 78171161 78171407 -124914125 + AluSx SINE Alu 1 246 -66 12155 109 34 24 chr5 78171445 78173381 -124912151 + L1PA7 LINE L1 8 1993 -4468 15450 36 0 0 chr5 78173481 78175323 -124910209 - L1PA7 LINE L1 -1825 4636 2795 7568 80 6 1 chr5 78175319 78177086 -124908446 + L1PA7 LINE L1 4658 6431 -38 * 2520 213 54 18 chr5 78177187 78177812 -124907720 + L1ME2 LINE L1 5439 6086 -78 1152 256 26 80 chr5 78177812 78177988 -124907544 + MLT1E LTR MaLR 1 185 -408 4774 51 15 20 chr5 78177988 78178321 -124907211 - L1PA7 LINE L1 0 6154 5824 2351 105 3 0 chr5 78178321 78178627 -124906905 - AluSq SINE Alu -6 307 1 4774 51 15 20 chr5 78178627 78178903 -124906629 - L1PA7 LINE L1 -330 5824 5548 1152 256 26 80 chr5 78178903 78179116 -124906416 + MLT1E LTR MaLR 185 369 -224 568 297 71 22 chr5 78179200 78179469 -124906063 + MLT1I LTR MaLR 5 286 -123 * 666 284 30 10 chr5 78179465 78179662 -124905870 + MLT1I LTR MaLR 191 391 -18 1099 167 0 90 chr5 78181233 78181467 -124904065 - AluJb SINE Alu -14 298 86 1224 131 0 6 chr5 78181470 78181667 -124903865 - AluSg/x SINE Alu 0 312 117 3229 98 9 74 chr5 78181768 78182319 -124903213 + L1P LINE L1 1981 2495 -3651 5753 40 3 0 chr5 78182327 78183002 -124902530 - L1PA4 LINE L1 -3 6152 5476 6376 109 29 23 chr5 78183008 78184960 -124900572 - SVA Other Other -518 1386 59 375 23 0 0 chr5 78184965 78185009 -124900523 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 5178 34 3 0 chr5 78185010 78185733 -124899799 - L1P2 LINE L1 -664 5491 4767 1968 104 8 0 chr5 78185948 78186207 -124899325 + AluSp SINE Alu 37 297 -16 1783 179 147 20 chr5 78186262 78186710 -124898822 + MLT1D LTR MaLR 1 505 0 767 302 74 36 chr5 78186759 78187286 -124898246 + L1MC/D LINE L1 5254 5800 -2008 14619 111 37 66 chr5 78187325 78188897 -124896635 + Tigger1 DNA MER2_type 1 1618 -800 812 171 86 0 chr5 78188897 78189037 -124896495 + FAM SINE Alu 18 169 -16 14619 111 37 66 chr5 78189037 78189816 -124895716 + Tigger1 DNA MER2_type 1618 2418 0 695 277 33 59 chr5 78189934 78190241 -124895291 + MLT1H LTR MaLR 58 356 -193 1792 148 7 17 chr5 78190523 78190820 -124894712 - AluJb SINE Alu -18 294 1 450 301 126 6 chr5 78191429 78191862 -124893670 - L2 LINE L2 -284 3029 2538 415 313 34 17 chr5 78192223 78192399 -124893133 - MIR SINE MIR -48 214 36 345 47 0 0 chr5 78195032 78195075 -124890457 + (TG)n Simple_repeat Simple_repeat 1 43 0 213 39 0 0 chr5 78195074 78195100 -124890432 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 2127 152 0 0 chr5 78196077 78196387 -124889145 - AluJb SINE Alu 0 312 3 1680 177 10 20 chr5 78196603 78196897 -124888635 - AluJo SINE Alu -21 291 1 599 273 84 59 chr5 78197571 78197893 -124887639 - L1M4 LINE L1 -2273 3873 3544 348 251 244 20 chr5 78198199 78198498 -124887034 - L1M4 LINE L1 -2685 3461 3096 1512 176 0 20 chr5 78198591 78198846 -124886686 - AluJo SINE Alu -62 250 1 2169 109 0 34 chr5 78199029 78199349 -124886183 - AluSc SINE Alu 0 309 1 353 338 113 0 chr5 78199495 78199699 -124885833 - HAL1b LINE L1 -571 777 551 1518 208 14 4 chr5 78200822 78201130 -124884402 + AluJb SINE Alu 1 311 0 258 81 0 0 chr5 78201187 78201224 -124884308 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 429 231 19 9 chr5 78201236 78201344 -124884188 - L2 LINE L2 -6 3307 3199 1746 139 66 7 chr5 78203154 78203427 -124882105 + AluJb SINE Alu 1 289 -23 2536 176 35 2 chr5 78203427 78203917 -124881615 - L1MB4 LINE L1 -7 6173 5668 1892 173 7 0 chr5 78205185 78205480 -124880052 + AluJo SINE Alu 1 297 -15 744 260 31 0 chr5 78205504 78205700 -124879832 + MIR SINE MIR 23 224 -38 420 308 0 0 chr5 78205754 78205861 -124879671 + L2 LINE L2 3160 3266 -6 1890 145 7 14 chr5 78206279 78206568 -124878964 - AluJb SINE Alu -20 292 6 22 0 0 0 chr5 78206745 78206767 -124878765 + AT_rich Low_complexity Low_complexity 1 22 0 1487 156 33 112 chr5 78207223 78207603 -124877929 - MLT1A1 LTR MaLR 0 432 1 4712 166 25 26 chr5 78207604 78208741 -124876791 - L1MB8 LINE L1 -36 6142 5004 1814 198 48 54 chr5 78208745 78209172 -124876360 - MLT1D LTR MaLR -7 498 73 1683 187 41 85 chr5 78209172 78209633 -124875899 - LTR47B LTR ERVL 0 443 3 1814 198 48 54 chr5 78209633 78209685 -124875847 - MLT1D LTR MaLR -432 73 22 423 0 0 0 chr5 78212369 78212416 -124873116 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 2206 92 7 0 chr5 78212426 78212708 -124872824 - AluSc SINE Alu -25 284 1 1724 135 60 0 chr5 78213235 78213540 -124871992 + AluSq SINE Alu 1 321 0 813 170 0 15 chr5 78213549 78213684 -124871848 + FLAM_C SINE Alu 1 133 0 200 265 0 0 chr5 78214661 78214710 -124870822 - L2 LINE L2 -298 2974 2926 450 316 21 31 chr5 78214781 78214974 -124870558 - MLT1J LTR MaLR -60 451 261 181 238 0 0 chr5 78215054 78215096 -124870436 - L2 LINE L2 -678 2636 2595 1547 140 0 21 chr5 78215104 78215347 -124870185 + AluJb SINE Alu 58 295 -17 370 282 82 15 chr5 78215351 78215639 -124869893 + L1M4c LINE L1 1329 1800 -4763 4212 140 30 14 chr5 78215682 78216382 -124869150 - MER50 LTR ERV1 -23 711 1 264 361 68 34 chr5 78216388 78216654 -124868878 + L1MDa LINE L1 56 330 -6210 198 0 0 0 chr5 78216832 78216854 -124868678 + (TC)n Simple_repeat Simple_repeat 2 23 0 395 246 40 96 chr5 78217182 78217381 -124868151 + L1MDa LINE L1 909 1096 -5447 27 81 0 0 chr5 78217513 78217575 -124867957 + AT_rich Low_complexity Low_complexity 1 62 0 622 214 97 32 chr5 78218205 78218359 -124867173 - HsTC2 DNA Tc2 -279 1619 1280 1337 218 44 83 chr5 78218359 78218794 -124866738 + MER34 LTR ERV1 1 418 -124 675 268 16 31 chr5 78218807 78219202 -124866330 + L1ME3A LINE L1 5191 5576 -588 733 362 21 93 chr5 78219224 78219602 -124865930 - MER3 DNA MER1_type 0 2581 2231 531 200 96 0 chr5 78219576 78219701 -124865831 - MER3 DNA MER1_type -21 188 52 * 1302 214 111 38 chr5 78219735 78220104 -124865428 + MSTD LTR MaLR 1 396 0 713 219 15 0 chr5 78220160 78220297 -124865235 - MER5A DNA MER1_type -19 170 32 276 298 83 32 chr5 78220298 78220550 -124864982 + L1ME3A LINE L1 5676 5940 -230 365 274 78 49 chr5 78220745 78220949 -124864583 + L1ME4a LINE L1 5859 6068 -53 378 255 93 43 chr5 78221162 78221323 -124864209 - MIR SINE MIR -4 258 90 203 176 0 0 chr5 78222065 78222099 -124863433 + CT-rich Low_complexity Low_complexity 3 36 0 351 0 0 0 chr5 78222145 78222184 -124863348 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 406 266 49 47 chr5 78222613 78222809 -124862723 + MIR SINE MIR 15 214 -48 320 289 56 11 chr5 78222863 78222953 -124862579 + MER91C DNA MER1_type 31 124 -16 1003 80 0 0 chr5 78223155 78223280 -124862252 + AluSq/x SINE Alu 1 125 -188 2411 200 35 67 chr5 78223398 78223858 -124861674 + L1M4 LINE L1 4370 4843 -1303 1768 171 7 0 chr5 78223858 78224144 -124861388 + AluJo SINE Alu 1 288 -24 2411 200 35 67 chr5 78224144 78224174 -124861358 + L1M4 LINE L1 4843 4872 -1274 1252 71 0 16 chr5 78224174 78224357 -124861175 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2411 200 35 67 chr5 78224357 78224494 -124861038 + L1M4 LINE L1 4872 4978 -1168 2281 97 0 3 chr5 78226188 78226486 -124859046 - AluSq SINE Alu -16 297 1 227 333 49 62 chr5 78226511 78226673 -124858859 - MIR SINE MIR -70 192 33 188 326 56 34 chr5 78227081 78227170 -124858362 + L2 LINE L2 3204 3294 -19 1922 123 40 3 chr5 78227592 78227652 -124857880 + L1MA4A LINE L1 5989 6045 -258 207 0 0 0 chr5 78227652 78227675 -124857857 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 1922 123 40 3 chr5 78227675 78227915 -124857617 + L1MA4A LINE L1 6045 6300 -3 1138 68 0 0 chr5 78227935 78228081 -124857451 - L1PA13 LINE L1 -4 6159 6014 308 280 153 8 chr5 78228124 78228242 -124857290 + MER5A DNA MER1_type 54 188 -1 1366 156 39 67 chr5 78229931 78230213 -124855319 + AluJb SINE Alu 1 274 -38 198 0 0 0 chr5 78230217 78230239 -124855293 + (GA)n Simple_repeat Simple_repeat 1 22 0 1391 267 52 41 chr5 78230271 78230754 -124854778 - LTR16C LTR ERVL -3 488 1 21 36 0 0 chr5 78230834 78230862 -124854670 + AT_rich Low_complexity Low_complexity 1 28 0 326 362 36 14 chr5 78231087 78231308 -124854224 - MERVL LTR ERVL -2065 3420 3195 1945 171 28 53 chr5 78231415 78231813 -124853719 - MLT1B LTR MaLR -2 388 1 1108 299 56 12 chr5 78232214 78232645 -124852887 - MERVL LTR ERVL -2359 2637 2188 1564 181 288 58 chr5 78232648 78233274 -124852258 - LTR50 LTR ERVL -25 770 1 1251 289 69 43 chr5 78233276 78233854 -124851678 - MERVL LTR ERVL -2805 2191 1599 912 237 9 40 chr5 78234103 78234331 -124851201 + MIR SINE MIR 40 260 -2 965 113 0 21 chr5 78234334 78234475 -124851057 + AluSq/x SINE Alu 1 138 -174 314 341 34 34 chr5 78234515 78234694 -124850838 + L1MC4a LINE L1 4098 4276 -1870 539 349 65 27 chr5 78234839 78235501 -124850031 + L1MC4a LINE L1 4514 5200 -946 257 290 200 0 chr5 78236567 78236667 -124848865 + L1MC4a LINE L1 5620 5739 -2069 2177 108 0 0 chr5 78236667 78236946 -124848586 + AluSx SINE Alu 1 279 -33 243 0 0 0 chr5 78236947 78236974 -124848558 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2981 90 27 2 chr5 78236981 78237393 -124848139 + L1MA2 LINE L1 5883 6304 0 5997 135 10 23 chr5 78238246 78239234 -124846298 - L1MA8 LINE L1 0 6291 5317 8182 23 2 0 chr5 78239243 78240624 -124844908 - L1PA4 LINE L1 -3 6152 4771 14633 27 0 0 chr5 78240624 78242326 -124843206 + L1PA4 LINE L1 3082 4783 -1363 235 192 0 0 chr5 78242324 78242376 -124843156 - L1MA8 LINE L1 -980 5332 5281 * 1564 195 58 14 chr5 78242456 78242804 -124842728 + MLT1A1 LTR MaLR 1 363 -2 21 36 0 0 chr5 78244188 78244216 -124841316 + AT_rich Low_complexity Low_complexity 1 28 0 807 237 84 0 chr5 78244573 78244763 -124840769 + MER63A DNA MER1_type 5 210 0 312 305 101 50 chr5 78245558 78245878 -124839654 - LTR16A1 LTR ERVL -72 416 72 1921 299 53 17 chr5 78246362 78246894 -124838638 - MER115 DNA AcHobo -104 589 39 2276 107 10 0 chr5 78248630 78248930 -124836602 - AluSx SINE Alu -9 303 1 22 35 0 0 chr5 78248936 78248965 -124836567 + AT_rich Low_complexity Low_complexity 1 29 0 458 265 130 40 chr5 78249154 78249407 -124836125 + HAL1b LINE L1 422 697 -651 327 259 46 9 chr5 78249905 78250013 -124835519 + L1MC4a LINE L1 5732 5843 -1965 1710 142 38 38 chr5 78250522 78250861 -124834671 - L1MB7 LINE L1 -27 6157 5819 1233 106 0 0 chr5 78250863 78251033 -124834499 - AluSg/x SINE Alu -12 300 131 871 273 83 73 chr5 78251133 78251771 -124833761 + L2 LINE L2 2627 3312 -1 516 298 84 17 chr5 78252552 78252730 -124832802 + MIR SINE MIR 2 191 -71 229 266 13 38 chr5 78253885 78253964 -124831568 + MIR3 SINE MIR 106 182 -26 21 36 0 0 chr5 78255038 78255066 -124830466 + AT_rich Low_complexity Low_complexity 1 28 0 248 198 173 62 chr5 78255077 78255158 -124830374 + L2 LINE L2 3219 3308 -5 803 202 50 61 chr5 78255370 78255568 -124829964 - MIR SINE MIR -10 252 57 1413 192 0 8 chr5 78255575 78255845 -124829687 - AluJo SINE Alu 0 302 35 837 276 143 29 chr5 78256012 78256432 -124829100 - L2 LINE L2 -4 3309 2842 487 309 53 0 chr5 78256659 78256811 -124828721 + MIR SINE MIR 33 192 -70 582 299 84 0 chr5 78258250 78258464 -124827068 - MIR SINE MIR -17 245 14 1150 273 95 16 chr5 78259193 78259725 -124825807 - L2 LINE L2 -12 3301 2733 1848 149 10 32 chr5 78259734 78260042 -124825490 + AluJb SINE Alu 1 301 -11 1062 108 23 40 chr5 78262477 78262653 -124822879 - L1PA16 LINE L1 0 6166 5994 282 281 0 0 chr5 78262655 78262737 -124822795 + L1ME3 LINE L1 3977 4058 -2088 * 305 308 95 11 chr5 78262736 78262928 -124822604 + L1ME3 LINE L1 5698 5902 -260 203 191 0 24 chr5 78263099 78263141 -124822391 + GA-rich Low_complexity Low_complexity 2 42 0 506 142 34 11 chr5 78324994 78325170 -124760362 + (TA)n Simple_repeat Simple_repeat 1 180 0 1757 150 37 34 chr5 78326276 78326630 -124758902 + THE1B LTR MaLR 9 363 -1 692 37 9 28 chr5 78326818 78326925 -124758607 + (GGAA)n Simple_repeat Simple_repeat 1 105 0 2226 165 45 5 chr5 78327571 78327995 -124757537 + L1MB2 LINE L1 5728 6168 -3 22 35 0 0 chr5 78327996 78328025 -124757507 + AT_rich Low_complexity Low_complexity 1 29 0 259 266 21 53 chr5 78328327 78328421 -124757111 - MIR SINE MIR -126 136 46 22 35 0 0 chr5 78331260 78331289 -124754243 + AT_rich Low_complexity Low_complexity 1 29 0 394 127 45 75 chr5 78331541 78331675 -124753857 - L1 LINE L1 -3386 3402 3273 5128 158 26 30 chr5 78331700 78333066 -124752466 - L1 LINE L1 -4188 2601 1249 3311 121 9 11 chr5 78333298 78333837 -124751695 + L1PB1 LINE L1 5614 6151 0 229 310 64 32 chr5 78334001 78334188 -124751344 + L1M4 LINE L1 3730 3922 -2224 21 36 0 0 chr5 78334189 78334217 -124751315 + AT_rich Low_complexity Low_complexity 1 28 0 502 114 0 11 chr5 78334226 78334314 -124751218 - L1PB4 LINE L1 -2 6154 6068 21 36 0 0 chr5 78334950 78334978 -124750554 + AT_rich Low_complexity Low_complexity 1 28 0 395 181 56 0 chr5 78335375 78335484 -124750048 + MER61E LTR ERV1 1 118 -484 23 0 0 0 chr5 78337230 78337253 -124748279 + AT_rich Low_complexity Low_complexity 1 23 0 295 174 29 29 chr5 78337778 78337863 -124747669 + L1ME1 LINE L1 6007 6078 -88 313 288 61 49 chr5 78337978 78338141 -124747391 + HAL1b LINE L1 152 316 -1032 2435 172 37 2 chr5 78338291 78338774 -124746758 + L1MB1 LINE L1 5669 6168 0 262 59 0 0 chr5 78339226 78339332 -124746200 - Alu SINE Alu 0 353 248 2044 130 60 20 chr5 78339650 78339997 -124745535 - THE1B LTR MaLR -1 363 3 6127 112 25 14 chr5 78339999 78340962 -124744570 - THE1B-int LTR MaLR 0 1580 608 522 82 0 0 chr5 78341070 78341143 -124744389 + THE1B LTR MaLR 292 364 0 22 35 0 0 chr5 78341193 78341222 -124744310 + AT_rich Low_complexity Low_complexity 1 29 0 489 312 89 48 chr5 78341248 78341662 -124743870 + L3 LINE CR1 564 994 -583 225 132 0 0 chr5 78341908 78341946 -124743586 + (TAA)n Simple_repeat Simple_repeat 1 38 0 513 32 0 0 chr5 78341992 78342055 -124743477 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1363 152 115 37 chr5 78342055 78342404 -124743128 - MSTA LTR MaLR -3 425 50 2458 74 0 3 chr5 78345786 78346097 -124739435 - AluY SINE Alu 0 311 2 566 192 8 17 chr5 78346333 78346453 -124739079 - FLAM_C SINE Alu -18 125 7 396 267 10 45 chr5 78346697 78346899 -124738633 - L1M4 LINE L1 -860 5286 5092 6381 133 10 21 chr5 78346988 78348298 -124737234 + L1MA1 LINE L1 5016 6302 0 540 279 38 4 chr5 78348318 78348558 -124736974 - L1M4 LINE L1 -1055 5091 4844 206 345 62 18 chr5 78348937 78349050 -124736482 + L2 LINE L2 3195 3312 -1 219 298 36 12 chr5 78349937 78350021 -124735511 + MIR SINE MIR 106 191 -71 303 310 0 20 chr5 78351245 78351345 -124734187 + L2 LINE L2 2652 2749 -565 767 225 42 135 chr5 78351845 78351910 -124733622 - MLT1A1 LTR MaLR -2 363 294 1662 103 8 0 chr5 78351910 78352152 -124733380 - L1PB1 LINE L1 -2 6149 5906 767 225 42 135 chr5 78352152 78352486 -124733046 - MLT1A1 LTR MaLR -71 294 1 561 164 9 60 chr5 78355779 78355895 -124729637 - MLT1A2 LTR MaLR -264 110 1 1587 171 30 24 chr5 78355951 78356249 -124729283 - AluJb SINE Alu -12 300 1 314 276 83 61 chr5 78357891 78358072 -124727460 + L2 LINE L2 2670 2854 -460 214 143 143 0 chr5 78358580 78358629 -124726903 + L2 LINE L2 3217 3272 0 883 271 134 35 chr5 78359544 78359998 -124725534 - LTR33 LTR ERVL -1 520 22 421 248 210 19 chr5 78360502 78360691 -124724841 - MIR SINE MIR -9 253 27 217 333 86 0 chr5 78360841 78360922 -124724610 - L2 LINE L2 -13 3300 3213 278 286 42 76 chr5 78361479 78361522 -124724010 - L2 LINE L2 0 3313 3270 1915 201 71 61 chr5 78361522 78362030 -124723502 + MER67D LTR ERV1 1 513 -1 278 286 42 76 chr5 78362030 78362105 -124723427 - L2 LINE L2 -43 3270 3199 1833 128 131 3 chr5 78362178 78362522 -124723010 - MSTA LTR MaLR 0 428 41 562 335 39 55 chr5 78363343 78363707 -124721825 + L2 LINE L2 2930 3287 -26 215 331 34 69 chr5 78364355 78364530 -124721002 - L2 LINE L2 -845 2469 2301 234 128 0 0 chr5 78365354 78365393 -124720139 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 78365482 78365510 -124720022 + AT_rich Low_complexity Low_complexity 1 28 0 226 354 155 18 chr5 78366032 78366258 -124719274 - L2 LINE L2 -543 2771 2515 326 322 60 41 chr5 78366312 78366579 -124718953 + L1MDb LINE L1 1146 1417 -4992 450 298 14 39 chr5 78366613 78366735 -124718797 + L1MDb LINE L1 1585 1709 -4878 1444 176 53 14 chr5 78366735 78367019 -124718513 - AluJo SINE Alu -17 295 1 450 298 14 39 chr5 78367019 78367178 -124718354 + L1MDb LINE L1 1709 1859 -4728 271 277 36 24 chr5 78367274 78367357 -124718175 - Charlie6 DNA MER1_type -39 3461 3378 19371 46 16 4 chr5 78367497 78370580 -124714952 - L1P LINE L1 -2686 3460 211 20997 39 1 24 chr5 78370691 78373467 -124712065 - L1P LINE L1 -954 5192 2480 1058 52 41 23 chr5 78373463 78373635 -124711897 + L1P LINE L1 4343 4517 -1629 * 308 280 153 8 chr5 78373942 78374060 -124711472 - MER5A DNA MER1_type -1 188 54 1138 68 0 0 chr5 78374103 78374249 -124711283 + L1PA13 LINE L1 6014 6159 -4 1922 123 40 3 chr5 78374269 78374509 -124711023 - L1MA4A LINE L1 -3 6300 6045 207 0 0 0 chr5 78374509 78374532 -124711000 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 1922 123 40 3 chr5 78374532 78374592 -124710940 - L1MA4A LINE L1 -258 6045 5989 227 333 49 62 chr5 78375508 78375670 -124709862 + MIR SINE MIR 33 192 -70 2281 97 0 3 chr5 78375695 78375993 -124709539 + AluSq SINE Alu 1 297 -16 201 352 80 0 chr5 78377515 78377603 -124707929 - L2 LINE L2 -29 3243 3149 2512 57 0 0 chr5 78378423 78378721 -124706811 + AluY SINE Alu 1 298 -13 242 242 47 62 chr5 78378782 78378910 -124706622 + L1MDb LINE L1 1807 1932 -4655 607 284 44 20 chr5 78379095 78379391 -124706141 + L1MDb LINE L1 2450 2752 -3654 459 284 7 37 chr5 78379467 78379763 -124705769 + L1MDb LINE L1 3304 3590 -2816 227 362 43 0 chr5 78379911 78380005 -124705527 - L2 LINE L2 -5 3267 3170 24 32 0 0 chr5 78380353 78380384 -124705148 + AT_rich Low_complexity Low_complexity 1 31 0 8108 205 51 47 chr5 78382296 78382726 -124702806 - L1M3 LINE L1 -610 5558 5131 792 69 0 0 chr5 78382726 78382828 -124702704 - L1PA13 LINE L1 -2 6161 6060 8108 205 51 47 chr5 78382828 78384946 -124700586 - L1M3 LINE L1 -1037 5131 2969 310 349 28 47 chr5 78385389 78385644 -124699888 - L1M4 LINE L1 -2157 3989 3740 35437 44 43 2 chr5 78385759 78390354 -124695178 + L1P LINE L1 1 4786 -1360 5780 205 8 1 chr5 78390668 78391859 -124693673 - L1 LINE L1 -966 5180 3982 1992 109 0 0 chr5 78392022 78392278 -124693254 - AluSc SINE Alu -18 291 36 1196 186 4 25 chr5 78392285 78392521 -124693011 - AluJo SINE Alu -80 232 2 309 313 179 0 chr5 78392661 78392773 -124692759 - MLT1G3 LTR MaLR 0 595 464 442 193 45 0 chr5 78392812 78392900 -124692632 - MLT1G3 LTR MaLR -222 308 217 2358 135 16 42 chr5 78393163 78393548 -124691984 - THE1C LTR MaLR 0 375 1 5244 102 7 7 chr5 78393548 78394266 -124691266 - THE1C-int LTR MaLR 0 1580 863 10781 118 24 34 chr5 78396266 78398854 -124686678 + L1P3 LINE L1 226 2810 -3651 6103 35 0 0 chr5 78398862 78399539 -124685993 - L1PA4 LINE L1 -3 6152 5476 6277 109 31 23 chr5 78399548 78401497 -124684035 - SVA Other Other -518 1386 59 375 23 0 0 chr5 78401502 78401546 -124683986 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 24476 35 0 0 chr5 78401547 78404560 -124680972 - L1P2 LINE L1 -664 5491 2480 3888 96 16 0 chr5 78404556 78405119 -124680413 + L1P LINE L1 4343 4914 -1232 * 603 118 9 82 chr5 78405629 78405739 -124679793 - AluJo SINE Alu -176 136 35 1528 241 9 3 chr5 78406478 78406810 -124678722 + MER58B DNA MER1_type 2 335 -6 24 53 0 0 chr5 78407095 78407133 -124678399 + AT_rich Low_complexity Low_complexity 1 38 0 261 277 16 13 chr5 78407305 78407459 -124678073 - L1ME LINE L1 -720 5431 5280 303 292 34 0 chr5 78408194 78408283 -124677249 - MER5B DNA MER1_type -58 120 29 1737 173 13 61 chr5 78408711 78409086 -124676446 + MLT1A2 LTR MaLR 18 374 0 1333 199 0 30 chr5 78409527 78409793 -124675739 + AluJo SINE Alu 47 304 -8 858 91 0 0 chr5 78409813 78409934 -124675598 + (AGGGGG)n Simple_repeat Simple_repeat 2 122 0 423 0 0 0 chr5 78412501 78412548 -124672984 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 2186 92 7 0 chr5 78412558 78412840 -124672692 - AluSc SINE Alu -25 284 1 1827 134 54 7 chr5 78413367 78413665 -124671867 + AluSq SINE Alu 1 312 -1 866 170 0 15 chr5 78413676 78413811 -124671721 + FLAM_C SINE Alu 1 133 0 216 265 0 0 chr5 78414790 78414839 -124670693 - L2 LINE L2 -298 2974 2926 459 316 21 31 chr5 78414910 78415103 -124670429 - MLT1J LTR MaLR -60 451 261 188 336 142 0 chr5 78415112 78415225 -124670307 - L2 LINE L2 -591 2723 2595 1531 140 0 21 chr5 78415233 78415476 -124670056 + AluJb SINE Alu 58 295 -17 350 282 73 15 chr5 78415479 78415685 -124669847 + L1M4c LINE L1 1327 1544 -4840 3458 132 24 19 chr5 78415808 78416392 -124669140 - MER50 LTR ERV1 -23 711 125 1508 167 3 100 chr5 78417163 78417395 -124668137 - AluJb SINE Alu -15 297 105 2224 128 0 3 chr5 78417395 78417707 -124667825 - AluSx SINE Alu -1 311 1 1508 167 3 100 chr5 78417707 78417803 -124667729 - AluJb SINE Alu -207 105 1 516 301 126 6 chr5 78419450 78419883 -124665649 - L2 LINE L2 -284 3029 2538 470 311 56 25 chr5 78420244 78420440 -124665092 - MIR SINE MIR -48 214 13 345 47 0 0 chr5 78423054 78423097 -124662435 + (TG)n Simple_repeat Simple_repeat 1 43 0 213 39 0 0 chr5 78423096 78423122 -124662410 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 2111 152 0 0 chr5 78424099 78424409 -124661123 - AluJb SINE Alu 0 312 3 1663 177 10 20 chr5 78424625 78424919 -124660613 - AluJo SINE Alu -21 291 1 619 273 84 59 chr5 78425593 78425915 -124659617 - L1M4 LINE L1 -2273 3873 3544 710 233 83 33 chr5 78426371 78426423 -124659109 + MIR SINE MIR 9 57 -205 2252 131 16 49 chr5 78426423 78426811 -124658721 - THE1C LTR MaLR 0 375 1 710 233 83 33 chr5 78426811 78426938 -124658594 + MIR SINE MIR 57 197 -65 372 235 141 59 chr5 78427732 78427845 -124657687 + MIR SINE MIR 58 191 -71 835 130 0 30 chr5 78427845 78427976 -124657556 + FLAM_C SINE Alu 1 127 -6 372 235 141 59 chr5 78427976 78428032 -124657500 + MIR SINE MIR 191 241 -21 2206 118 3 3 chr5 78429190 78429496 -124656036 + AluSx SINE Alu 1 306 -6 473 225 42 63 chr5 78431124 78431266 -124654266 - MER5B DNA MER1_type -6 172 34 271 235 41 51 chr5 78431444 78431542 -124653990 - Charlie8 DNA MER1_type -2260 157 61 315 299 43 8 chr5 78431978 78432095 -124653437 + MIR SINE MIR 71 191 -71 783 98 27 9 chr5 78432596 78432708 -124652824 - AluSp SINE Alu -163 150 37 493 260 71 90 chr5 78432724 78433090 -124652442 - L1M4 LINE L1 -1028 5118 4760 283 240 116 39 chr5 78433178 78433307 -124652225 - L1ME3A LINE L1 -24 6146 6008 575 265 94 2 chr5 78433778 78434013 -124651519 + L1MC4a LINE L1 5594 5847 -351 551 289 25 55 chr5 78436239 78436474 -124649058 - L2 LINE L2 -12 3301 3074 491 253 5 89 chr5 78438032 78438222 -124647310 + MLT1I LTR MaLR 236 409 0 901 242 92 107 chr5 78438242 78438829 -124646703 - MLT1E LTR MaLR -1 592 15 209 288 34 0 chr5 78439831 78439890 -124645642 - MIR SINE MIR -41 221 161 255 287 21 53 chr5 78440005 78440099 -124645433 + MIR SINE MIR 46 136 -126 891 244 23 9 chr5 78440587 78440804 -124644728 - AluJo SINE Alu -92 220 1 708 213 109 11 chr5 78440831 78441014 -124644518 + L2 LINE L2 2249 2449 -865 6337 81 6 20 chr5 78441043 78441955 -124643577 - L1PA7 LINE L1 -2 6152 5254 7630 75 26 1 chr5 78442067 78443488 -124642044 - L1P3 LINE L1 -432 5722 4270 186 320 64 32 chr5 78444254 78444379 -124641153 - MIR3 SINE MIR -18 190 62 21 0 0 0 chr5 78444523 78444544 -124640988 + AT_rich Low_complexity Low_complexity 1 21 0 1500 285 101 45 chr5 78446152 78447620 -124637912 - L1ME3A LINE L1 -777 5369 4096 1195 284 54 0 chr5 78447593 78447963 -124637569 + L1M4 LINE L1 2486 2875 -3271 * 402 299 50 10 chr5 78448103 78448298 -124637234 + L1ME LINE L1 5641 5846 -320 5735 133 62 1 chr5 78448298 78449172 -124636360 + Tigger1 DNA MER2_type 1 927 -1491 453 231 34 17 chr5 78449281 78449398 -124636134 + L2 LINE L2 3189 3307 -6 258 81 0 0 chr5 78449410 78449447 -124636085 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 222 37 0 0 chr5 78449504 78449531 -124636001 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1394 206 14 14 chr5 78449533 78449815 -124635717 - AluJb SINE Alu -30 282 1 332 358 55 31 chr5 78450464 78450721 -124634811 + HAL1 LINE L1 1134 1396 -1111 622 214 97 32 chr5 78451021 78451175 -124634357 - HsTC2 DNA Tc2 -279 1619 1280 1337 218 44 83 chr5 78451175 78451610 -124633922 + MER34 LTR ERV1 1 418 -124 465 263 22 18 chr5 78451623 78451893 -124633639 + L1M3 LINE L1 5191 5463 -776 398 321 50 7 chr5 78452160 78452300 -124633232 + MER5A DNA MER1_type 43 188 -1 5224 25 3 5 chr5 78453712 78454346 -124631186 - L1P LINE L1 -743 5403 4771 * 5852 27 3 8 chr5 78454339 78455071 -124630461 + L1P LINE L1 3075 3802 -2344 807 237 84 0 chr5 78455628 78455818 -124629714 - MER63A DNA MER1_type 0 210 5 21 36 0 0 chr5 78456175 78456203 -124629329 + AT_rich Low_complexity Low_complexity 1 28 0 449 349 53 28 chr5 78456498 78456931 -124628601 - L1M4 LINE L1 -1189 4957 4514 965 113 0 21 chr5 78457299 78457440 -124628092 - AluJb SINE Alu -174 138 1 912 237 9 40 chr5 78457443 78457671 -124627861 - MIR SINE MIR -2 260 40 1148 302 52 19 chr5 78457920 78458440 -124627092 + HERV16 LTR ERVL 1599 2134 -2952 2071 208 15 28 chr5 78458550 78459021 -124626511 + L1MC/D LINE L1 4528 4992 -1154 650 158 8 63 chr5 78459026 78459153 -124626379 + FLAM_A SINE Alu 9 128 -14 1536 182 70 36 chr5 78459155 78459710 -124625822 + L1MC/D LINE L1 4987 5562 -644 1020 142 0 151 chr5 78460026 78460123 -124625409 + AluJb SINE Alu 1 42 -270 1858 125 0 52 chr5 78460123 78460452 -124625080 + AluSx SINE Alu 1 312 0 1020 142 0 151 chr5 78460452 78460593 -124624939 + AluJb SINE Alu 42 203 -109 262 232 54 80 chr5 78460692 78460804 -124624728 + MIR SINE MIR 2 110 -152 330 340 53 0 chr5 78461327 78461421 -124624111 - L2 LINE L2 -40 3232 3134 3190 201 48 15 chr5 78461571 78462299 -124623233 + L1ME2 LINE L1 5335 6086 -78 884 230 22 0 chr5 78462299 78462477 -124623055 + MLT1E LTR MaLR 1 182 -411 1901 88 30 42 chr5 78462477 78462807 -124622725 - L1PA7 LINE L1 -2 6152 5827 1106 292 60 16 chr5 78463655 78464086 -124621446 - HERV16 LTR ERVL -2359 2637 2188 1572 198 320 7 chr5 78464089 78464660 -124620872 - LTR50 LTR ERVL -25 770 21 2009 76 32 12 chr5 78464903 78465224 -124620308 - L1PA7 LINE L1 -326 5828 5512 470 259 18 21 chr5 78465259 78465404 -124620128 + MLT1E LTR MaLR 279 426 -198 580 297 71 22 chr5 78465474 78465743 -124619789 + MLT1I LTR MaLR 5 286 -123 * 675 284 30 10 chr5 78465739 78465936 -124619596 + MLT1I LTR MaLR 191 391 -18 361 176 54 0 chr5 78467029 78467103 -124618429 + L1ME LINE L1 5401 5478 -684 262 270 6 145 chr5 78467100 78467259 -124618273 + L1ME3 LINE L1 5437 5573 -593 * 1550 261 40 42 chr5 78467261 78467691 -124617841 - LTR16A LTR ERVL -3 447 19 332 239 62 71 chr5 78468206 78468319 -124617213 + L1ME3 LINE L1 5828 5939 -225 442 366 6 0 chr5 78468320 78468492 -124617040 - ERVL LTR ERVL -870 4894 4722 787 319 73 32 chr5 78468657 78469065 -124616467 - ERVL LTR ERVL -1201 4453 4029 12268 68 15 1 chr5 78469210 78470733 -124614799 - ERVL LTR ERVL -1228 4426 2882 10033 188 18 16 chr5 78470834 78472849 -124612683 - L1M2 LINE L1 -4298 2491 479 916 256 180 53 chr5 78472973 78473533 -124611999 + L1ME4a LINE L1 5271 5758 -363 180 0 0 0 chr5 78473533 78473553 -124611979 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 916 256 180 53 chr5 78473553 78473658 -124611874 + L1ME4a LINE L1 5758 5848 -273 2831 111 49 2 chr5 78473658 78474065 -124611467 - MSTA LTR MaLR -1 427 2 916 256 180 53 chr5 78474065 78474153 -124611379 + L1ME4a LINE L1 5848 6121 0 204 98 49 98 chr5 78475459 78475520 -124610012 + A-rich Low_complexity Low_complexity 2 59 0 227 333 33 0 chr5 78475690 78475734 -124609798 - MIR SINE MIR -63 199 158 612 63 13 0 chr5 78475734 78475813 -124609719 - MADE1 DNA Mariner 0 80 1 227 333 33 0 chr5 78475813 78475858 -124609674 - MIR SINE MIR -104 158 107 977 241 74 97 chr5 78476188 78476549 -124608983 + MER34 LTR ERV1 1 346 -196 2551 53 0 0 chr5 78476549 78476848 -124608684 + AluY SINE Alu 1 299 -12 977 241 74 97 chr5 78476848 78477041 -124608491 + MER34 LTR ERV1 346 542 0 1956 134 27 0 chr5 78477111 78477410 -124608122 + MER7A DNA MER2_type 1 305 -41 244 250 105 0 chr5 78477424 78477500 -124608032 - MIR SINE MIR -27 235 152 297 89 22 0 chr5 78477504 78477549 -124607983 + MADE1 DNA Mariner 1 46 -34 730 240 0 0 chr5 78477549 78477695 -124607837 - MIR SINE MIR -115 147 2 2055 98 0 0 chr5 78478193 78478458 -124607074 + AluSg SINE Alu 37 301 -9 949 158 39 88 chr5 78478800 78479060 -124606472 + L1MA7 LINE L1 6043 6289 -2 2627 53 0 0 chr5 78479801 78480105 -124605427 + AluY SINE Alu 1 304 -7 288 296 108 43 chr5 78480228 78480414 -124605118 + MIR SINE MIR 15 212 -50 225 0 0 0 chr5 78482359 78482384 -124603148 + (TG)n Simple_repeat Simple_repeat 2 26 0 2108 179 63 20 chr5 78482387 78482834 -124602698 - MLT1C LTR MaLR 0 467 2 2981 90 27 2 chr5 78483412 78483824 -124601708 - L1MA2 LINE L1 0 6304 5883 243 0 0 0 chr5 78483831 78483858 -124601674 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2177 108 0 0 chr5 78483859 78484138 -124601394 - AluSx SINE Alu -33 279 1 257 290 200 0 chr5 78484138 78484238 -124601294 - L1MC/D LINE L1 -2069 5739 5620 1366 156 39 67 chr5 78488443 78488725 -124596807 + AluJb SINE Alu 1 274 -38 198 0 0 0 chr5 78488729 78488751 -124596781 + (GA)n Simple_repeat Simple_repeat 1 22 0 1361 282 41 31 chr5 78488783 78489266 -124596266 - LTR16C LTR ERVL -3 488 1 21 36 0 0 chr5 78489346 78489374 -124596158 + AT_rich Low_complexity Low_complexity 1 28 0 7276 66 9 7 chr5 78489561 78491063 -124594469 + L1PA7 LINE L1 4648 6154 0 201 248 74 94 chr5 78491649 78491798 -124593734 + L3 LINE CR1 1192 1337 -240 745 284 155 30 chr5 78491955 78492356 -124593176 + L2 LINE L2 2495 2945 -369 23 0 0 0 chr5 78492532 78492555 -124592977 + AT_rich Low_complexity Low_complexity 1 23 0 353 301 21 0 chr5 78494001 78494094 -124591438 + L2 LINE L2 3214 3308 -5 900 213 62 20 chr5 78494994 78495238 -124590294 - MIR SINE MIR -1 261 8 621 270 152 17 chr5 78495367 78495597 -124589935 - MIR SINE MIR 0 262 2 465 19 0 0 chr5 78496316 78496370 -124589162 + (CAG)n Simple_repeat Simple_repeat 1 54 0 321 26 0 0 chr5 78496527 78496565 -124588967 + (CA)n Simple_repeat Simple_repeat 1 38 0 1858 145 21 74 chr5 78496575 78496809 -124588723 - MER2 DNA MER2_type -25 320 108 2000 71 0 45 chr5 78496809 78497078 -124588454 - L1PA5 LINE L1 0 6154 5898 1858 145 21 74 chr5 78497078 78497181 -124588351 - MER2 DNA MER2_type -237 108 1 234 0 0 0 chr5 78497693 78497719 -124587813 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 261 0 0 0 chr5 78497718 78497747 -124587785 + (TG)n Simple_repeat Simple_repeat 1 29 0 278 216 64 0 chr5 78498449 78498574 -124586958 + (TA)n Simple_repeat Simple_repeat 1 133 0 281 208 14 0 chr5 78499740 78499812 -124585720 + CT-rich Low_complexity Low_complexity 3 75 0 297 296 72 0 chr5 78500957 78501082 -124584450 - MIR SINE MIR -6 256 123 252 312 117 78 chr5 78501301 78501532 -124584000 + L2 LINE L2 3031 3270 -2 456 261 45 60 chr5 78501575 78501774 -124583758 + MIR3 SINE MIR 7 202 -6 12446 95 18 11 chr5 78502120 78504575 -124580957 + L1PA14 LINE L1 3683 6161 0 865 218 92 0 chr5 78504576 78504815 -124580717 - L1M4 LINE L1 -3270 2876 2616 2271 97 0 3 chr5 78504824 78505124 -124580408 - AluSx SINE Alu -13 299 1 258 255 82 20 chr5 78505245 78505343 -124580189 + L1ME4a LINE L1 6018 6121 0 189 103 0 0 chr5 78505379 78505408 -124580124 - L2 LINE L2 -219 3053 3025 21 0 0 0 chr5 78505539 78505560 -124579972 + AT_rich Low_complexity Low_complexity 1 21 0 201 250 0 0 chr5 78507402 78507446 -124578086 + CT-rich Low_complexity Low_complexity 2 45 0 305 308 95 11 chr5 78507618 78507810 -124577722 - L1ME3 LINE L1 -260 5902 5698 282 281 0 0 chr5 78507809 78507891 -124577641 - L1ME3 LINE L1 -2088 4058 3977 * 1062 108 23 40 chr5 78507893 78508069 -124577463 + L1PA16 LINE L1 5994 6166 0 1875 146 10 32 chr5 78510505 78510813 -124574719 - AluJb SINE Alu -11 301 1 1150 273 95 16 chr5 78510822 78511354 -124574178 + L2 LINE L2 2733 3301 -12 582 299 84 0 chr5 78512083 78512297 -124573235 + MIR SINE MIR 14 245 -17 487 309 53 0 chr5 78513737 78513889 -124571643 - MIR SINE MIR -70 192 33 837 276 143 29 chr5 78514116 78514536 -124570996 + L2 LINE L2 2842 3309 -4 1413 192 0 8 chr5 78514703 78514953 -124570579 + AluJo SINE Alu 35 282 -30 181 0 0 0 chr5 78514953 78514973 -124570559 + (TAAAA)n Simple_repeat Simple_repeat 1 180 0 803 202 50 61 chr5 78514980 78515178 -124570354 + MIR SINE MIR 57 252 -10 248 198 173 62 chr5 78515390 78515471 -124570061 - L2 LINE L2 -5 3308 3219 21 36 0 0 chr5 78515482 78515510 -124570022 + AT_rich Low_complexity Low_complexity 1 28 0 229 266 13 38 chr5 78516585 78516664 -124568868 - MIR3 SINE MIR -26 182 106 516 298 84 17 chr5 78517819 78517997 -124567535 - MIR SINE MIR -71 191 2 564 248 8 8 chr5 78518778 78518911 -124566621 - L2 LINE L2 -1 3312 3180 327 259 46 9 chr5 78519669 78519777 -124565755 + L1MC4a LINE L1 5732 5843 -1965 3017 162 25 46 chr5 78520286 78520627 -124564905 - L1MB7 LINE L1 -27 6157 5835 2261 89 0 13 chr5 78520627 78520929 -124564603 - AluSg SINE Alu -12 298 1 3017 162 25 46 chr5 78520929 78521236 -124564296 - L1MB7 LINE L1 -349 5835 5523 807 233 132 22 chr5 78521352 78521746 -124563786 + MLT1F LTR MaLR 81 547 -48 1095 105 43 0 chr5 78521746 78521908 -124563624 + MER41B LTR ERV1 1 169 -466 6284 89 28 30 chr5 78521908 78522998 -124562534 + L1PB1 LINE L1 5062 6149 -2 2555 116 0 3 chr5 78523086 78523448 -124562084 + MER41B LTR ERV1 177 537 -98 3248 108 11 11 chr5 78523548 78524001 -124561531 + LTR8 LTR ERV1 239 691 0 804 232 176 23 chr5 78524006 78524303 -124561229 - LTR33 LTR ERVL -112 409 48 2200 200 62 73 chr5 78524303 78524863 -124560669 - MLT2B3 LTR ERVL 0 554 1 804 232 176 23 chr5 78524863 78524918 -124560614 - LTR33 LTR ERVL -473 48 3 280 188 0 0 chr5 78524938 78524986 -124560546 + MLT1L LTR MaLR 348 395 -220 1379 188 109 29 chr5 78525133 78525146 -124560386 - MER88 LTR ERVL -1 463 452 4566 137 18 38 chr5 78525146 78525881 -124559651 + MER72 LTR ERV1 1 720 -2 1379 188 109 29 chr5 78525881 78526207 -124559325 - MER88 LTR ERVL -12 452 97 228 255 235 0 chr5 78526646 78526744 -124558788 - LTR16A LTR ERVL -305 145 25 1856 247 54 12 chr5 78526776 78527252 -124558280 + L1ME3 LINE L1 5593 6094 -68 189 107 0 0 chr5 78527252 78527280 -124558252 + (TG)n Simple_repeat Simple_repeat 2 29 0 1856 247 54 12 chr5 78527280 78527322 -124558210 + L1ME3 LINE L1 6094 6133 -29 1898 139 10 10 chr5 78527374 78527668 -124557864 + AluJb SINE Alu 3 296 -16 226 252 221 15 chr5 78528327 78528458 -124557074 + MIR SINE MIR 83 240 -22 489 165 156 0 chr5 78529416 78529525 -124556007 + AluSq/x SINE Alu 2 127 -186 1921 299 53 17 chr5 78529669 78530201 -124555331 - MER115 DNA AcHobo -104 589 39 301 55 73 0 chr5 78531938 78531993 -124553539 - Alu SINE Alu 0 308 250 499 270 52 23 chr5 78532607 78532781 -124552751 + MIR SINE MIR 63 241 -21 * 770 233 148 5 chr5 78532757 78532967 -124552565 - MIR SINE MIR -21 241 2 505 183 0 11 chr5 78534377 78534470 -124551062 + L1MB8 LINE L1 4916 5007 -1139 1858 205 46 56 chr5 78534470 78534545 -124550987 + MLT1D LTR MaLR 1 75 -430 1814 187 41 85 chr5 78534545 78535006 -124550526 + LTR47B LTR ERVL 3 443 0 1858 205 46 56 chr5 78535006 78535433 -124550099 + MLT1D LTR MaLR 75 498 -7 4762 164 26 28 chr5 78535437 78536574 -124548958 + L1MB8 LINE L1 5004 6142 -36 829 88 72 0 chr5 78536575 78536700 -124548832 + MLT1A1 LTR MaLR 1 134 -231 22 0 0 0 chr5 78537337 78537359 -124548173 + AT_rich Low_complexity Low_complexity 1 22 0 1874 145 7 14 chr5 78537536 78537825 -124547707 + AluJb SINE Alu 6 292 -20 457 308 0 0 chr5 78538242 78538349 -124547183 - L2 LINE L2 -6 3266 3160 737 266 29 7 chr5 78538403 78538608 -124546924 - MIR SINE MIR -38 224 18 732 108 68 88 chr5 78538803 78538951 -124546581 - SVA Other Other -1179 207 63 335 22 0 22 chr5 78538961 78539006 -124546526 + (GGGAGA)n Simple_repeat Simple_repeat 6 49 0 24197 34 0 3 chr5 78539007 78542027 -124543505 - L1P2 LINE L1 -664 5491 2480 657 65 32 48 chr5 78542023 78542147 -124543385 + L1P LINE L1 4343 4464 -1682 * 1900 116 4 0 chr5 78542260 78542518 -124543014 + AluSq SINE Alu 54 312 -1 2356 104 0 0 chr5 78542712 78543020 -124542512 - AluSg SINE Alu -2 308 1 1295 168 4 0 chr5 78543084 78543310 -124542222 + L1MA4 LINE L1 6069 6295 -5 2532 131 19 3 chr5 78543938 78544297 -124541235 - MLT1A1 LTR MaLR 0 365 1 10772 195 30 11 chr5 78545351 78545473 -124540059 - L1 LINE L1 -2986 3862 3744 1703 176 3 36 chr5 78545473 78545780 -124539752 - AluJo SINE Alu -15 297 1 10772 195 30 11 chr5 78545780 78545903 -124539629 - L1 LINE L1 -3104 3744 3625 2085 119 0 3 chr5 78545903 78546189 -124539343 - AluY SINE Alu -8 303 19 10772 195 30 11 chr5 78546189 78548888 -124536644 - L1 LINE L1 -3223 3625 860 1059 240 95 49 chr5 78549632 78550023 -124535509 - MLT1J1 LTR MaLR -19 427 19 535 296 199 0 chr5 78550201 78550407 -124535125 - MIR SINE MIR -12 250 4 292 276 209 0 chr5 78551958 78552063 -124533469 - L1M4 LINE L1 -1907 4239 4113 1033 214 52 43 chr5 78552125 78552882 -124532650 - L1ME1 LINE L1 -7 6954 6068 2244 125 3 0 chr5 78552882 78553194 -124532338 - AluSq SINE Alu 0 313 1 1033 214 52 43 chr5 78553194 78553550 -124531982 - L1ME1 LINE L1 -893 6068 5716 1482 177 42 35 chr5 78553695 78553983 -124531549 - MER21B LTR ERV1 -555 308 19 493 250 0 0 chr5 78553990 78554086 -124531446 - MER21B LTR ERV1 -767 96 1 4831 230 41 29 chr5 78554089 78555483 -124530049 - L1ME1 LINE L1 -1209 5732 4323 741 199 7 14 chr5 78555484 78555630 -124529902 - MLT1F LTR MaLR -9 533 389 577 261 75 25 chr5 78555642 78555883 -124529649 - L1ME1 LINE L1 -4739 2202 1950 381 22 0 0 chr5 78555889 78555935 -124529597 + (TG)n Simple_repeat Simple_repeat 2 47 0 375 289 20 7 chr5 78555957 78556109 -124529423 - L1ME1 LINE L1 -5187 1754 1601 634 226 32 51 chr5 78556135 78556286 -124529246 - L1ME1 LINE L1 -5004 1419 1272 2357 221 72 30 chr5 78556286 78556855 -124528677 + MLT1E LTR MaLR 1 593 0 634 226 32 51 chr5 78556855 78556920 -124528612 - L1ME1 LINE L1 -5151 1272 1207 464 281 23 8 chr5 78556923 78557051 -124528481 - MER5B DNA MER1_type -46 132 3 463 258 55 31 chr5 78558353 78558481 -124527051 + MIR SINE MIR 5 135 -127 245 271 0 17 chr5 78558463 78558522 -124527010 + L2 LINE L2 3197 3254 -18 * 1060 203 5 29 chr5 78558815 78559022 -124526510 + MLT1E LTR MaLR 377 578 -15 189 107 0 0 chr5 78560524 78560552 -124524980 + (CCCCCA)n Simple_repeat Simple_repeat 5 32 0 359 220 90 70 chr5 78560849 78560949 -124524583 - L1ME1 LINE L1 -6271 851 413 665 229 136 69 chr5 78561438 78561814 -124523718 + L1ME4a LINE L1 5524 5924 -197 1748 149 10 27 chr5 78562987 78563283 -124522249 - AluJo SINE Alu -21 291 1 207 69 0 0 chr5 78563453 78563482 -124522050 + (TG)n Simple_repeat Simple_repeat 1 29 0 943 202 19 14 chr5 78563628 78563841 -124521691 + MIR SINE MIR 18 231 -31 210 236 0 0 chr5 78564475 78564530 -124521002 + (TG)n Simple_repeat Simple_repeat 2 56 0 361 36 36 0 chr5 78565221 78565276 -124520256 + (GA)n Simple_repeat Simple_repeat 2 58 0 489 220 25 0 chr5 78565702 78565861 -124519671 + CT-rich Low_complexity Low_complexity 2 164 0 2511 207 61 33 chr5 78566029 78566638 -124518894 - MLT1E2 LTR MaLR 0 626 1 197 227 76 15 chr5 78566875 78566941 -124518591 - MIR3 SINE MIR -52 156 87 2554 86 22 14 chr5 78567071 78567432 -124518100 - THE1B LTR MaLR 0 364 1 337 186 0 17 chr5 78568851 78568910 -124516622 + MLT1L LTR MaLR 7 64 -551 707 306 17 4 chr5 78568971 78569206 -124516326 + MIR SINE MIR 22 259 -3 2173 121 44 0 chr5 78569207 78569505 -124516027 - AluSx SINE Alu -1 311 1 279 264 14 0 chr5 78569548 78569620 -124515912 + MLT1L LTR MaLR 192 264 -351 1855 151 7 0 chr5 78570261 78570539 -124514993 + AluJb SINE Alu 1 280 -32 883 277 82 0 chr5 78570566 78570848 -124514684 - L1MC4a LINE L1 -1866 5942 5638 1336 237 82 26 chr5 78570995 78571412 -124514120 - MLT1J LTR MaLR -2 509 70 22 56 0 0 chr5 78571422 78571458 -124514074 + AT_rich Low_complexity Low_complexity 1 36 0 293 335 80 9 chr5 78571902 78572114 -124513418 - L2 LINE L2 -260 3053 2827 392 332 75 54 chr5 78573105 78573863 -124511669 - L2 LINE L2 -23 3249 2468 2460 80 0 3 chr5 78574041 78574342 -124511190 + AluSq SINE Alu 1 300 -13 214 351 36 0 chr5 78574493 78574604 -124510928 - L2 LINE L2 -1341 1973 1859 586 260 51 11 chr5 78574902 78575079 -124510453 + MIR SINE MIR 1 184 -78 462 278 0 40 chr5 78575088 78575214 -124510318 + L2 LINE L2 3152 3272 0 187 368 24 0 chr5 78576396 78576521 -124509011 - MIR3 SINE MIR -20 188 61 405 221 142 18 chr5 78576649 78576762 -124508770 + MIR SINE MIR 20 146 -62 611 217 89 0 chr5 78576774 78576954 -124508578 - MIR SINE MIR 0 262 67 271 324 45 0 chr5 78577322 78577433 -124508099 - MER5B DNA MER1_type -62 116 1 407 200 56 0 chr5 78577948 78578038 -124507494 + MIR SINE MIR 63 157 -105 506 229 144 0 chr5 78578563 78578716 -124506816 - MIR3 SINE MIR -4 204 30 247 204 0 0 chr5 78579209 78579258 -124506274 - MIR3 SINE MIR -9 199 151 3052 75 70 2 chr5 78579827 78580208 -124505324 + MLT2A1 LTR ERVL 1 414 -30 261 0 0 0 chr5 78580208 78580237 -124505295 + (TA)n Simple_repeat Simple_repeat 2 30 0 3052 75 70 2 chr5 78580237 78580271 -124505261 + MLT2A1 LTR ERVL 414 444 0 17924 70 15 3 chr5 78580271 78582555 -124502977 + HERVL-A1 LTR ERVL 1 2311 -3343 315 194 0 16 chr5 78583298 78583360 -124502172 + MIR3 SINE MIR 111 171 -37 1999 225 60 29 chr5 78584135 78584368 -124501164 - L1M4 LINE L1 -1314 4832 4608 1994 148 0 0 chr5 78584368 78584658 -124500874 - AluSx SINE Alu -22 290 1 1999 225 60 29 chr5 78584658 78585019 -124500513 - L1M4 LINE L1 -1538 4608 4219 3844 177 170 113 chr5 78588335 78588926 -124496606 + L1MD3 LINE L1 6633 7189 -806 416 274 28 0 chr5 78588926 78589032 -124496500 + MLT1F1 LTR MaLR 3 111 -456 3844 177 170 113 chr5 78589032 78589624 -124495908 + L1MD3 LINE L1 7189 7995 0 398 234 91 118 chr5 78589637 78589966 -124495566 + L1ME3A LINE L1 16 335 -6205 281 230 101 66 chr5 78590271 78590469 -124495063 + L1ME3A LINE L1 764 971 -5559 2362 221 141 57 chr5 78590616 78591477 -124494055 + L1ME3A LINE L1 1013 2013 -4527 1965 151 7 0 chr5 78591477 78591769 -124493763 + AluSx SINE Alu 1 294 -18 2362 221 141 57 chr5 78591769 78592158 -124493374 + L1ME3A LINE L1 2013 2368 -4172 610 247 31 62 chr5 78592610 78592662 -124492870 - MIR SINE MIR -29 233 181 252 59 0 0 chr5 78592662 78592696 -124492836 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 610 247 31 62 chr5 78592696 78592870 -124492662 - MIR SINE MIR -81 181 14 2990 101 27 9 chr5 78594778 78595216 -124490316 + MER4C LTR ERV1 20 465 0 2367 106 0 0 chr5 78595254 78595557 -124489975 + AluSg1 SINE Alu 1 303 -6 2438 188 121 11 chr5 78595920 78596447 -124489085 + MER34C LTR ERV1 1 585 0 1944 132 19 0 chr5 78596864 78597175 -124488357 - MER41B LTR ERV1 0 635 319 3958 265 82 56 chr5 78597912 78601089 -124484443 + L1ME3A LINE L1 3272 6537 -27 2509 62 3 3 chr5 78601944 78602252 -124483280 - AluY SINE Alu -3 308 1 299 284 9 26 chr5 78602922 78603038 -124482494 + GA-rich Low_complexity Low_complexity 3 116 0 214 158 0 0 chr5 78603705 78603743 -124481789 - MIR SINE MIR -109 153 116 1917 159 77 3 chr5 78603743 78604083 -124481449 + MLT1A1 LTR MaLR 1 365 0 2272 98 0 29 chr5 78604139 78604454 -124481078 - AluSx SINE Alu -6 306 1 819 156 0 15 chr5 78604482 78604617 -124480915 + Charlie5 DNA MER1_type 1 133 -2479 698 179 8 0 chr5 78604606 78604740 -124480792 + Charlie5 DNA MER1_type 2234 2368 -244 * 904 254 18 4 chr5 78604751 78604979 -124480553 + LTR16A LTR ERVL 216 446 -4 28 0 0 0 chr5 78604986 78605014 -124480518 + AT_rich Low_complexity Low_complexity 1 28 0 619 319 48 16 chr5 78605430 78605744 -124479788 + ERVL LTR ERVL 3764 4087 -1677 6181 142 17 5 chr5 78605880 78607017 -124478515 - L1MA5A LINE L1 -23 6274 5126 263 402 8 0 chr5 78607018 78607135 -124478397 + ERVL LTR ERVL 4313 4430 -1224 207 154 19 19 chr5 78607243 78607295 -124478237 + (TA)n Simple_repeat Simple_repeat 2 53 0 2234 81 3 7 chr5 78607358 78607670 -124477862 + AluY SINE Alu 2 312 0 1757 163 0 37 chr5 78607686 78608009 -124477523 + AluSx SINE Alu 1 312 0 360 289 122 56 chr5 78608047 78608351 -124477181 - HAL1 LINE L1 -1424 1083 760 459 167 46 23 chr5 78610134 78610308 -124475224 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 2415 77 0 6 chr5 78610488 78610800 -124474732 + AluY SINE Alu 1 310 -1 303 240 0 0 chr5 78611190 78611294 -124474238 + (TG)n Simple_repeat Simple_repeat 1 104 0 213 94 0 0 chr5 78612737 78612769 -124472763 + (TG)n Simple_repeat Simple_repeat 2 33 0 2498 198 72 16 chr5 78612856 78613367 -124472165 + MLT1F LTR MaLR 1 540 -2 3176 143 0 8 chr5 78613519 78614001 -124471531 - MER66A LTR ERV1 0 478 1 208 250 48 12 chr5 78614343 78614427 -124471105 - MIR SINE MIR -56 206 120 340 183 17 0 chr5 78614464 78614524 -124471008 + MER3 DNA MER1_type 41 101 -108 1576 159 6 72 chr5 78816182 78816368 -124269164 - AluJo SINE Alu 0 312 156 2659 48 0 3 chr5 78816368 78816680 -124268852 - AluY SINE Alu 0 311 1 1576 159 6 72 chr5 78816680 78816826 -124268706 - AluJo SINE Alu -156 156 2 322 336 50 7 chr5 78820093 78820233 -124265299 - MER5A DNA MER1_type -1 188 43 297 135 0 0 chr5 78821348 78821400 -124264132 + (GA)n Simple_repeat Simple_repeat 1 52 0 384 22 0 0 chr5 78821405 78821450 -124264082 + (CA)n Simple_repeat Simple_repeat 2 46 0 182 91 30 0 chr5 78821498 78821531 -124264001 + GA-rich Low_complexity Low_complexity 2 35 0 996 178 14 39 chr5 78821826 78822034 -124263498 + MER20 DNA MER1_type 17 219 0 298 228 76 0 chr5 78822109 78822188 -124263344 - MIR3 SINE MIR -34 174 90 321 219 39 129 chr5 78822207 78822362 -124263170 + MIR SINE MIR 14 154 -108 505 304 66 21 chr5 78822541 78822784 -124262748 + MIR SINE MIR 5 258 -4 1147 236 104 23 chr5 78822794 78823272 -124262260 + MLT1G1 LTR MaLR 1 547 -48 1231 102 38 0 chr5 78823272 78823458 -124262074 + MER41B LTR ERV1 1 193 -442 5961 112 24 24 chr5 78823458 78824522 -124261010 + L1PB1 LINE L1 5086 6149 -2 3272 120 0 0 chr5 78824610 78825069 -124260463 + MER41B LTR ERV1 177 635 0 2507 184 119 11 chr5 78825487 78826015 -124259517 - MER34C LTR ERV1 0 585 1 2315 118 0 0 chr5 78826378 78826683 -124258849 - AluSg1 SINE Alu -4 305 1 2990 101 27 9 chr5 78826721 78827159 -124258373 - MER4C LTR ERV1 0 465 20 610 247 31 62 chr5 78829070 78829244 -124256288 + MIR SINE MIR 14 181 -81 252 59 0 0 chr5 78829244 78829278 -124256254 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 610 247 31 62 chr5 78829278 78829330 -124256202 + MIR SINE MIR 181 233 -29 2335 222 139 57 chr5 78829782 78830173 -124255359 - L1ME LINE L1 -4172 2368 2011 1965 151 7 0 chr5 78830173 78830465 -124255067 - AluSx SINE Alu -18 294 1 2335 222 139 57 chr5 78830465 78831326 -124254206 - L1ME LINE L1 -4529 2011 1013 284 227 101 64 chr5 78831473 78831672 -124253860 - L1ME LINE L1 -5559 971 764 397 258 76 103 chr5 78831977 78832306 -124253226 - L1ME LINE L1 -6205 335 16 610 194 18 18 chr5 78832317 78832482 -124253050 - L1MD2 LINE L1 0 6359 6195 2768 186 194 128 chr5 78832483 78832911 -124252621 - L1MD3 LINE L1 -164 7831 7433 416 274 28 0 chr5 78832911 78833017 -124252515 - MLT1F1 LTR MaLR -456 111 3 2768 186 194 128 chr5 78833017 78833608 -124251924 - L1MD3 LINE L1 -562 7433 6633 1999 225 60 29 chr5 78836926 78837287 -124248245 + L1M4 LINE L1 4219 4608 -1538 1994 148 0 0 chr5 78837287 78837577 -124247955 + AluSx SINE Alu 1 290 -22 1999 225 60 29 chr5 78837577 78837810 -124247722 + L1M4 LINE L1 4608 4832 -1314 315 194 0 16 chr5 78838585 78838647 -124246885 - MIR3 SINE MIR -37 171 111 701 233 148 5 chr5 78840546 78840756 -124244776 + MIR SINE MIR 2 241 -21 443 275 47 23 chr5 78840732 78840903 -124244629 - MIR SINE MIR -21 241 67 * 1401 187 105 32 chr5 78841577 78841905 -124243627 + MER88 LTR ERVL 97 452 -12 4337 136 16 38 chr5 78841905 78842641 -124242891 - MER72 LTR ERV1 -2 720 1 1401 187 105 32 chr5 78842641 78842654 -124242878 + MER88 LTR ERVL 452 463 -1 283 188 0 0 chr5 78842799 78842847 -124242685 - MLT1L LTR MaLR -220 395 348 933 223 188 34 chr5 78842867 78842922 -124242610 + LTR33 LTR ERVL 3 48 -473 2079 201 63 70 chr5 78842922 78843480 -124242052 + MLT2B3 LTR ERVL 1 554 0 933 223 188 34 chr5 78843480 78843781 -124241751 + LTR33 LTR ERVL 48 444 -77 4858 104 16 17 chr5 78843781 78844473 -124241059 - LTR8 LTR ERV1 0 691 1 933 223 188 34 chr5 78844473 78844563 -124240969 + LTR33 LTR ERVL 444 519 -2 313 217 29 0 chr5 78844595 78844664 -124240868 - MLT1J LTR MaLR -331 180 110 408 300 148 30 chr5 78844898 78845228 -124240304 - L3 LINE CR1 -17 1560 1192 12646 81 8 0 chr5 78845814 78848275 -124237257 - L1PA7 LINE L1 0 6154 3681 398 286 35 50 chr5 78848619 78848818 -124236714 - MIR3 SINE MIR -6 202 7 183 312 117 78 chr5 78848861 78849092 -124236440 - L2 LINE L2 -2 3270 3031 269 286 76 0 chr5 78849311 78849430 -124236102 + MIR SINE MIR 123 250 -12 281 208 14 0 chr5 78850580 78850652 -124234880 + GA-rich Low_complexity Low_complexity 3 75 0 21 36 0 0 chr5 78851066 78851094 -124234438 + AT_rich Low_complexity Low_complexity 1 28 0 278 216 64 0 chr5 78851820 78851945 -124233587 + (TA)n Simple_repeat Simple_repeat 1 133 0 297 0 0 0 chr5 78852647 78852680 -124232852 + (CA)n Simple_repeat Simple_repeat 1 33 0 180 0 0 0 chr5 78852679 78852699 -124232833 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 1847 145 21 74 chr5 78853211 78853314 -124232218 + MER2 DNA MER2_type 1 108 -237 1904 71 0 45 chr5 78853314 78853583 -124231949 + L1PA5 LINE L1 5898 6154 0 1847 145 21 74 chr5 78853583 78853817 -124231715 + MER2 DNA MER2_type 108 320 -25 447 19 0 0 chr5 78853827 78853879 -124231653 + (TG)n Simple_repeat Simple_repeat 1 52 0 438 20 0 0 chr5 78854036 78854087 -124231445 + (CTG)n Simple_repeat Simple_repeat 1 51 0 559 270 152 17 chr5 78854806 78855036 -124230496 + MIR SINE MIR 2 262 0 822 213 62 20 chr5 78855165 78855409 -124230123 + MIR SINE MIR 8 261 -1 324 301 21 0 chr5 78856309 78856402 -124229130 - L2 LINE L2 -5 3308 3214 23 0 0 0 chr5 78857850 78857873 -124227659 + AT_rich Low_complexity Low_complexity 1 23 0 720 278 148 28 chr5 78858049 78858449 -124227083 - L2 LINE L2 -369 2945 2498 1839 183 189 18 chr5 78859484 78859933 -124225599 + L1MD2 LINE L1 5834 6359 0 966 195 115 35 chr5 78859951 78860337 -124225195 + L1ME3 LINE L1 5185 5576 -588 1567 258 40 42 chr5 78860339 78860769 -124224763 - LTR16A LTR ERVL -3 447 19 280 286 61 66 chr5 78860917 78861130 -124224402 - ERVL LTR ERVL -201 5284 5073 327 239 62 71 chr5 78861288 78861401 -124224131 + L1ME3 LINE L1 5828 5939 -225 463 369 87 0 chr5 78861402 78861643 -124223889 - ERVL LTR ERVL -799 4855 4594 1204 310 63 57 chr5 78861739 78862596 -124222936 - ERVL LTR ERVL -889 4292 3285 1876 245 50 15 chr5 78862716 78863196 -124222336 + L1ME3 LINE L1 5593 6094 -68 297 75 0 0 chr5 78863196 78863236 -124222296 + (TG)n Simple_repeat Simple_repeat 2 41 0 1876 245 50 15 chr5 78863236 78863278 -124222254 + L1ME3 LINE L1 6094 6133 -29 1935 139 7 10 chr5 78863330 78863625 -124221907 + AluJo SINE Alu 3 296 -16 231 253 212 0 chr5 78864320 78864419 -124221113 + MIR SINE MIR 121 240 -22 2400 112 0 0 chr5 78865376 78865689 -124219843 + AluSq SINE Alu 1 313 0 2370 104 0 0 chr5 78865883 78866191 -124219341 - AluSg SINE Alu -2 308 1 1298 168 4 0 chr5 78866255 78866481 -124219051 + L1MA4 LINE L1 6069 6295 -5 2532 131 19 3 chr5 78867109 78867468 -124218064 - MLT1A1 LTR MaLR 0 365 1 315 211 98 0 chr5 78868397 78868489 -124217043 - MIR SINE MIR -60 148 96 239 278 56 0 chr5 78869091 78869163 -124216369 + L2 LINE L2 3238 3313 0 22 0 0 0 chr5 78870676 78870698 -124214834 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr5 78871689 78871711 -124213821 + (T)n Simple_repeat Simple_repeat 1 22 0 887 276 111 16 chr5 78871725 78872113 -124213419 + L2 LINE L2 2883 3307 -6 342 318 154 19 chr5 78872482 78872695 -124212837 - MIR SINE MIR -6 256 20 1297 238 46 15 chr5 78872724 78873119 -124212413 - MER113 DNA MER1_type? -45 476 70 410 0 20 0 chr5 78873602 78873652 -124211880 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 180 97 0 0 chr5 78873849 78873880 -124211652 + (A)n Simple_repeat Simple_repeat 1 31 0 195 42 0 0 chr5 78874776 78874800 -124210732 + (TCC)n Simple_repeat Simple_repeat 1 24 0 24 53 0 0 chr5 78876253 78876291 -124209241 + GC_rich Low_complexity Low_complexity 1 38 0 303 271 8 78 chr5 78877079 78877208 -124208324 - MIR SINE MIR -77 185 66 651 175 69 62 chr5 78877586 78877746 -124207786 - L1ME3A LINE L1 -3 6665 6505 199 272 173 0 chr5 78879696 78879777 -124205755 - MIR SINE MIR -67 141 47 228 67 0 0 chr5 78883619 78883649 -124201883 + (GA)n Simple_repeat Simple_repeat 1 30 0 860 164 0 0 chr5 78885705 78885827 -124199705 - FLAM_A SINE Alu -9 124 3 374 258 0 78 chr5 78885937 78886065 -124199467 - L2 LINE L2 -27 3286 3169 896 119 0 0 chr5 78886149 78886267 -124199265 - FLAM_C SINE Alu -25 118 1 181 171 49 24 chr5 78886699 78886740 -124198792 + MIR3 SINE MIR 160 201 -7 1685 161 14 18 chr5 78887021 78887326 -124198206 - AluJb SINE Alu 0 304 1 23 0 0 0 chr5 78887737 78887760 -124197772 + AT_rich Low_complexity Low_complexity 1 23 0 736 270 52 43 chr5 78887781 78887937 -124197595 + MIR SINE MIR 2 162 -100 2424 84 0 7 chr5 78887937 78888245 -124197287 - AluY SINE Alu -5 306 1 736 270 52 43 chr5 78888245 78888318 -124197214 + MIR SINE MIR 162 233 -29 321 309 0 10 chr5 78890620 78890717 -124194815 + L1ME LINE L1 5497 5592 -529 309 236 76 118 chr5 78890723 78890867 -124194665 + L2 LINE L2 3027 3164 -149 2166 199 48 90 chr5 78890878 78891565 -124193967 - L1ME1 LINE L1 -5 6161 5504 411 321 32 12 chr5 78891853 78892082 -124193450 - L1ME3A LINE L1 -287 6381 6152 398 22 0 0 chr5 78892109 78892154 -124193378 + Tigger2 DNA MER2_type 1 45 -2673 1144 225 0 0 chr5 78892191 78892391 -124193141 - MER8 DNA MER2_type -38 201 2 906 265 81 3 chr5 78892410 78892906 -124192626 - L1ME3A LINE L1 -528 6134 5605 1596 120 31 4 chr5 78892926 78893185 -124192347 - L1MA7 LINE L1 0 6291 6026 1053 279 68 30 chr5 78893199 78893700 -124191832 - L1ME3A LINE L1 -2028 4616 4097 280 290 47 19 chr5 78893773 78893880 -124191652 - L1ME1 LINE L1 -32 6134 6025 * 724 274 63 27 chr5 78893878 78894290 -124191242 - L1ME3A LINE L1 -4052 2773 2347 * 2124 258 48 57 chr5 78894273 78895461 -124190071 - L1ME LINE L1 -4612 2034 870 493 295 22 65 chr5 78896332 78896411 -124189121 - L1M4 LINE L1 -2527 3619 3538 2317 84 0 19 chr5 78896411 78896721 -124188811 - AluY SINE Alu -7 304 1 493 295 22 65 chr5 78896721 78896963 -124188569 - L1M4 LINE L1 -2608 3538 3312 324 125 0 0 chr5 78897335 78897383 -124188149 - Alu SINE Alu -254 48 1 1952 92 0 4 chr5 78897385 78897636 -124187896 + AluSc SINE Alu 56 305 -4 4369 346 39 19 chr5 78897735 78898978 -124186554 + ERVL LTR ERVL 1894 3204 -2560 1716 212 11 45 chr5 78898978 78899356 -124186176 - MLT1A1 LTR MaLR 0 365 1 4369 346 39 19 chr5 78899356 78900360 -124185172 + ERVL LTR ERVL 3204 4186 -1578 388 250 0 90 chr5 78900359 78900503 -124185029 + ERVL LTR ERVL 4515 4645 -1119 * 1317 340 33 30 chr5 78900525 78901786 -124183746 + ERVL LTR ERVL 4203 4991 -5 1285 287 25 57 chr5 78901792 78902269 -124183263 + LTR16B LTR ERVL 1 462 -2 826 297 38 41 chr5 78902269 78902908 -124182624 + L1ME2 LINE L1 1971 2676 -3539 619 257 15 0 chr5 78902959 78903095 -124182437 + MER58B DNA MER1_type 203 340 -1 7974 236 68 21 chr5 78903128 78903955 -124181577 + L1ME2 LINE L1 2705 3492 -2741 243 61 0 0 chr5 78903955 78903988 -124181544 + (CA)n Simple_repeat Simple_repeat 2 34 0 7974 236 68 21 chr5 78903988 78906529 -124179003 + L1ME2 LINE L1 3492 6232 -1 428 245 31 0 chr5 78906542 78906640 -124178892 - L2 LINE L2 -22 3291 3191 183 42 0 0 chr5 78907614 78907638 -124177894 + (TG)n Simple_repeat Simple_repeat 1 24 0 768 278 20 4 chr5 78907648 78908013 -124177519 - LTR16C LTR ERVL -9 482 76 329 266 154 35 chr5 78908084 78908253 -124177279 - MIR SINE MIR -73 189 1 228 325 25 0 chr5 78908289 78908369 -124177163 - MIR SINE MIR -102 160 79 392 313 111 0 chr5 78909421 78909629 -124175903 + LTR16B LTR ERVL 226 456 -8 496 344 66 25 chr5 78909651 78909971 -124175561 + HERV16 LTR ERVL 42 374 -4622 1530 263 36 16 chr5 78910424 78911377 -124174155 + HERV16 LTR ERVL 872 1987 -3009 1563 285 33 68 chr5 78911440 78912016 -124173516 + HERV16 LTR ERVL 2135 2690 -2306 603 374 16 8 chr5 78912016 78912382 -124173150 + HERVL LTR ERVL 4743 5111 -543 616 346 41 30 chr5 78912658 78913117 -124172415 + LTR16B LTR ERVL 1 464 0 506 227 78 8 chr5 78914153 78914281 -124171251 + L2 LINE L2 3136 3272 0 411 241 19 0 chr5 78915618 78915726 -124169806 + L1MC/D LINE L1 4495 4604 -1542 258 236 18 0 chr5 78916940 78916995 -124168537 + L1MC/D LINE L1 5615 5670 -2138 194 211 77 0 chr5 78918577 78918629 -124166903 + L2 LINE L2 3258 3313 0 2473 153 104 2 chr5 78918675 78919099 -124166433 + LTR24 LTR ERV1 1 467 0 435 269 94 56 chr5 78919229 78919389 -124166143 - MIR SINE MIR -88 174 9 259 241 28 37 chr5 78920674 78920782 -124164750 + (TATG)n Simple_repeat Simple_repeat 2 108 0 562 289 139 5 chr5 78922376 78922570 -124162962 + MIR SINE MIR 22 241 -21 21 36 0 0 chr5 78922735 78922763 -124162769 + AT_rich Low_complexity Low_complexity 1 28 0 2199 105 30 0 chr5 78923924 78924220 -124161312 - AluSp SINE Alu -8 305 1 180 371 0 0 chr5 78924961 78925031 -124160501 + MER5A DNA MER1_type 72 141 -48 180 0 0 0 chr5 78925038 78925058 -124160474 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 273 325 12 0 chr5 78926352 78926432 -124159100 + G-rich Low_complexity Low_complexity 5 85 0 797 252 72 68 chr5 78927218 78927675 -124157857 - MLT1J LTR MaLR -52 459 1 1575 208 65 51 chr5 78927746 78928065 -124157467 + MER63B DNA MER1_type 1 329 -733 2001 112 0 66 chr5 78928065 78928370 -124157162 - AluSx SINE Alu -25 287 3 1575 208 65 51 chr5 78928370 78928478 -124157054 + MER63B DNA MER1_type 329 434 -2 327 248 284 9 chr5 78928556 78928665 -124156867 + L2 LINE L2 3134 3272 0 203 184 0 0 chr5 78928703 78928741 -124156791 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2338 49 0 11 chr5 78930039 78930351 -124155181 + AluY SINE Alu 1 311 0 229 265 84 36 chr5 78930743 78930826 -124154706 - MIR SINE MIR -50 212 126 330 26 0 0 chr5 78932059 78932098 -124153434 + (CA)n Simple_repeat Simple_repeat 1 39 0 556 125 0 0 chr5 78932423 78932503 -124153029 - MADE1 DNA Mariner 0 80 1 200 231 301 13 chr5 78933967 78934123 -124151409 - MIR3 SINE MIR -5 203 3 1886 130 12 43 chr5 78934178 78934206 -124151326 - L1MC1 LINE L1 0 6333 6306 2419 131 3 3 chr5 78934206 78934549 -124150983 - L1PA15 LINE L1 -3 6162 5820 1886 130 12 43 chr5 78934549 78934844 -124150688 - L1MC1 LINE L1 -27 6306 6020 269 326 42 0 chr5 78935699 78935794 -124149738 + MIR SINE MIR 45 143 -65 231 224 0 0 chr5 78936371 78936420 -124149112 + L2 LINE L2 3262 3310 -3 553 270 31 13 chr5 78936476 78936635 -124148897 + L2 LINE L2 2544 2705 -609 296 258 21 0 chr5 78936659 78936756 -124148776 - L1M4 LINE L1 -2754 3392 3294 * 849 191 86 168 chr5 78936749 78937435 -124148097 - L1M4 LINE L1 -3400 2746 2117 1546 253 63 23 chr5 78937442 78938040 -124147492 + L1M4 LINE L1 3362 3983 -2163 2527 242 61 49 chr5 78938045 78939025 -124146507 + L1M4 LINE L1 4019 5010 -1136 5965 130 32 22 chr5 78939451 78940617 -124144915 - L1MA8 LINE L1 0 6291 5113 332 362 17 0 chr5 78940629 78940745 -124144787 + L2 LINE L2 2936 3053 -219 767 280 17 17 chr5 78941223 78941455 -124144077 + MIR SINE MIR 28 259 -3 689 175 0 7 chr5 78941757 78941900 -124143632 + CT-rich Low_complexity Low_complexity 3 144 0 2306 125 0 0 chr5 78942312 78942623 -124142909 + AluSx SINE Alu 1 311 -1 234 308 99 0 chr5 78942977 78943068 -124142464 + L2 LINE L2 2919 3018 -254 1832 115 0 84 chr5 78943193 78943514 -124142018 - AluY SINE Alu -17 294 1 287 289 120 14 chr5 78943768 78943976 -124141556 + L1ME3A LINE L1 5732 5961 -209 27 0 0 0 chr5 78944070 78944097 -124141435 + AT_rich Low_complexity Low_complexity 1 27 0 225 229 0 100 chr5 78944622 78944692 -124140840 - MIR SINE MIR 0 262 200 372 344 28 6 chr5 78944699 78944879 -124140653 - MLT1L LTR MaLR 0 615 432 455 285 16 8 chr5 78945090 78945213 -124140319 - MIR SINE MIR -75 187 64 203 241 138 23 chr5 78946017 78946104 -124139428 + MER5A DNA MER1_type 91 187 -2 * 363 210 0 0 chr5 78946045 78946107 -124139425 - MER5A DNA MER1_type -114 75 14 261 98 0 0 chr5 78948848 78948889 -124136643 + (CA)n Simple_repeat Simple_repeat 2 42 0 293 253 16 16 chr5 78949014 78949109 -124136423 - MER5B DNA MER1_type -6 183 78 1436 169 50 38 chr5 78949708 78950028 -124135504 - MER33 DNA MER1_type 0 324 1 1835 239 70 37 chr5 78950122 78950673 -124134859 + L2 LINE L2 2483 3070 -243 2282 101 3 13 chr5 78950673 78950989 -124134543 - AluSp SINE Alu 0 313 1 1835 239 70 37 chr5 78950989 78951240 -124134292 + L2 LINE L2 3070 3311 -2 1665 206 30 33 chr5 78953049 78953413 -124132119 - MLT1A1 LTR MaLR 0 365 3 30 27 0 0 chr5 78953770 78953807 -124131725 + AT_rich Low_complexity Low_complexity 1 37 0 1620 169 7 11 chr5 78953814 78954092 -124131440 - AluJo SINE Alu -31 281 5 1904 160 58 104 chr5 78955883 78956289 -124129243 + L1MB7 LINE L1 5690 6068 -116 2324 89 3 3 chr5 78956289 78956582 -124128950 + AluSp SINE Alu 1 293 -20 1904 160 58 104 chr5 78956582 78956694 -124128838 + L1MB7 LINE L1 6068 6184 0 537 216 18 0 chr5 78957600 78957711 -124127821 + MER34 LTR ERV1 4 116 -426 21 0 0 0 chr5 78957712 78957733 -124127799 + AT_rich Low_complexity Low_complexity 1 21 0 2777 87 22 3 chr5 78957733 78958084 -124127448 - L1PB1 LINE L1 0 6151 5791 183 42 0 0 chr5 78958084 78958108 -124127424 + (TG)n Simple_repeat Simple_repeat 2 25 0 2777 87 22 3 chr5 78958108 78958124 -124127408 - L1PB1 LINE L1 -360 5791 5777 299 64 0 21 chr5 78958125 78958172 -124127360 + (TA)n Simple_repeat Simple_repeat 2 47 0 2052 121 48 0 chr5 78958178 78958468 -124127064 - AluSx SINE Alu -8 304 1 1363 96 0 0 chr5 78958469 78958656 -124126876 - L1PB1 LINE L1 -367 5784 5598 1209 234 9 103 chr5 78958656 78959121 -124126411 + MER34 LTR ERV1 122 542 0 469 250 67 24 chr5 78959235 78959399 -124126133 - L3 LINE CR1 -237 1340 1170 358 214 124 39 chr5 78960630 78960808 -124124724 - MLT1J LTR MaLR -27 484 292 262 246 15 138 chr5 78960826 78960956 -124124576 - MLT1L LTR MaLR -286 329 216 226 246 29 29 chr5 78960927 78960996 -124124536 - MLT1J LTR MaLR -332 179 111 * 511 276 157 9 chr5 78961630 78961840 -124123692 + MIR SINE MIR 3 243 -19 29 28 0 0 chr5 78961895 78961931 -124123601 + AT_rich Low_complexity Low_complexity 1 36 0 2703 133 56 19 chr5 78962315 78962728 -124122804 - MSTA LTR MaLR 0 428 1 259 341 22 0 chr5 78962804 78962895 -124122637 - L3 LINE CR1 -1066 511 419 15967 80 7 3 chr5 78963454 78966430 -124119102 + L1PA7 LINE L1 3167 6154 0 195 250 0 0 chr5 78967004 78967052 -124118480 + L3b LINE CR1 1180 1227 -356 1652 69 20 0 chr5 78967156 78967360 -124118172 + L1PA7 LINE L1 5947 6154 0 1099 268 82 53 chr5 78967646 78968097 -124117435 + LTR16B LTR ERVL 1 464 0 294 325 9 26 chr5 78968572 78968686 -124116846 + L2 LINE L2 3156 3267 -5 1291 243 159 38 chr5 78969104 78969557 -124115975 - MLT1J LTR MaLR -2 509 2 3891 191 47 28 chr5 78971063 78971731 -124113801 + L1MB7 LINE L1 4927 5632 -552 2182 109 7 0 chr5 78971731 78972024 -124113508 + AluSp SINE Alu 1 295 -18 3891 191 47 28 chr5 78972024 78972589 -124112943 + L1MB7 LINE L1 5632 6184 0 231 88 0 0 chr5 78973616 78973650 -124111882 + (TC)n Simple_repeat Simple_repeat 2 35 0 693 247 67 31 chr5 78974511 78974705 -124110827 - MER63A DNA MER1_type 0 210 10 1180 247 11 28 chr5 78974741 78975224 -124110308 - L2 LINE L2 -231 3082 2537 461 328 94 0 chr5 78975241 78975433 -124110099 + L3 LINE CR1 1340 1549 -28 332 294 12 0 chr5 78975817 78975902 -124109630 - MIR3 SINE MIR -3 205 120 1968 139 3 23 chr5 78976477 78976779 -124108753 - AluJo SINE Alu -16 296 1 342 0 0 0 chr5 78976859 78976897 -124108635 + (T)n Simple_repeat Simple_repeat 1 38 0 800 173 0 68 chr5 78977608 78977770 -124107762 + FRAM SINE Alu 1 151 -15 31 0 0 0 chr5 78977802 78977833 -124107699 + AT_rich Low_complexity Low_complexity 1 31 0 335 312 259 0 chr5 78978549 78978754 -124106778 - MIR SINE MIR -3 259 2 644 236 146 66 chr5 78978754 78979055 -124106477 + MER102a DNA MER1_type 1 325 -5 271 308 86 50 chr5 78980141 78980339 -124105193 + MIR SINE MIR 21 225 -37 464 265 181 34 chr5 78980474 78980795 -124104737 + L2 LINE L2 2944 3311 -2 2323 92 0 3 chr5 78980863 78981158 -124104374 + AluSx SINE Alu 1 294 -18 4572 167 27 14 chr5 78981167 78982344 -124103188 + L1MB8 LINE L1 4971 6162 -16 21 36 0 0 chr5 78984039 78984067 -124101465 + AT_rich Low_complexity Low_complexity 1 28 0 308 204 65 43 chr5 78984810 78984903 -124100629 - MER20B DNA MER1_type -605 178 84 439 288 64 0 chr5 78986175 78986300 -124099232 - MIR SINE MIR -14 248 116 1994 111 9 38 chr5 78988490 78988805 -124096727 + AluSp SINE Alu 1 306 -7 21 0 0 0 chr5 78990113 78990134 -124095398 + AT_rich Low_complexity Low_complexity 1 21 0 1009 105 0 23 chr5 78990134 78990267 -124095265 - FLAM_C SINE Alu -3 130 1 550 224 33 26 chr5 78990289 78990441 -124095091 - MIR SINE MIR 0 262 110 2303 93 0 0 chr5 78991195 78991485 -124094047 - AluSg SINE Alu 0 310 21 439 268 85 34 chr5 78992347 78992408 -124093124 - L1MC4a LINE L1 -1851 5957 5901 1723 113 117 4 chr5 78992408 78992673 -124092859 - AluSg1 SINE Alu -14 295 1 439 268 85 34 chr5 78992673 78992846 -124092686 - L1MC4a LINE L1 -1907 5901 5711 1752 65 0 0 chr5 78992912 78993126 -124092406 + L1PA13 LINE L1 5948 6161 -2 351 300 0 36 chr5 78994760 78994870 -124090662 - L2 LINE L2 0 3313 3208 243 273 15 0 chr5 78995152 78995218 -124090314 + MIR SINE MIR 192 258 -4 296 276 141 24 chr5 78995248 78995418 -124090114 - L2 LINE L2 -353 2961 2772 201 147 0 0 chr5 78995943 78995977 -124089555 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 182 191 71 0 chr5 78996451 78996493 -124089039 + MIR SINE MIR 87 131 -131 248 268 52 137 chr5 78996637 78996790 -124088742 - L2 LINE L2 -6 3266 3127 652 250 73 20 chr5 78997534 78997738 -124087794 - MIR SINE MIR 0 262 48 2309 112 0 0 chr5 78999366 78999678 -124085854 + AluSx SINE Alu 1 312 0 2045 86 72 0 chr5 79000440 79000718 -124084814 + AluY SINE Alu 1 298 -13 969 90 8 0 chr5 79001211 79001344 -124084188 + L1PB2 LINE L1 6018 6151 0 298 254 146 36 chr5 79001506 79001616 -124083916 - L2 LINE L2 0 3313 3192 5322 190 104 33 chr5 79001627 79001926 -124083606 + Charlie1a DNA MER1_type 10 286 -2475 2085 117 0 0 chr5 79001926 79002209 -124083323 + AluSx SINE Alu 1 283 -29 516 32 0 0 chr5 79002211 79002273 -124083259 + (ATAAG)n Simple_repeat Simple_repeat 2 63 0 5322 190 104 33 chr5 79002273 79003246 -124082286 + Charlie1a DNA MER1_type 286 1388 -1373 1915 128 11 4 chr5 79003246 79003519 -124082013 - AluJb SINE Alu -16 296 22 5322 190 104 33 chr5 79003519 79003587 -124081945 + Charlie1a DNA MER1_type 1388 1450 -5 437 340 58 11 chr5 79003673 79003861 -124081671 - L2 LINE L2 -167 3105 2909 22 35 0 0 chr5 79004169 79004198 -124081334 + AT_rich Low_complexity Low_complexity 1 29 0 2241 109 0 0 chr5 79005123 79005425 -124080107 - AluSc SINE Alu -7 302 1 21 0 0 0 chr5 79005472 79005493 -124080039 + AT_rich Low_complexity Low_complexity 1 21 0 208 250 103 29 chr5 79005611 79005679 -124079853 + L2 LINE L2 3200 3272 0 434 299 60 24 chr5 79005684 79005851 -124079681 - MIR SINE MIR -87 175 3 2293 106 3 0 chr5 79006703 79007014 -124078518 + AluSx SINE Alu 1 312 0 1043 140 17 11 chr5 79007114 79007292 -124078240 + L1MA9 LINE L1 6134 6312 0 461 326 0 28 chr5 79007333 79007477 -124078055 + L2 LINE L2 3133 3272 0 2292 190 78 15 chr5 79008064 79008538 -124076994 - MLT1D LTR MaLR 0 505 2 1707 269 48 47 chr5 79009657 79009929 -124075603 + L1MC4a LINE L1 5002 4745 -1401 2235 133 133 13 chr5 79009929 79010311 -124075221 + MSTA LTR MaLR 1 428 0 1707 269 48 47 chr5 79010311 79010966 -124074566 + L1MC4a LINE L1 4744 5397 -749 199 363 74 0 chr5 79011022 79011157 -124074375 + L2 LINE L2 2935 3079 -193 350 217 33 33 chr5 79011338 79011458 -124074074 + L1ME4a LINE L1 5209 5328 -818 619 288 65 46 chr5 79011572 79011971 -124073561 + L1ME4a LINE L1 5504 5858 -263 1912 138 36 42 chr5 79011981 79012314 -124073218 - MER2 DNA MER2_type 0 345 15 280 364 35 7 chr5 79013107 79013250 -124072282 + MIR SINE MIR 4 150 -112 1115 216 48 39 chr5 79013250 79013708 -124071824 + L1M4 LINE L1 2881 3342 -2804 209 286 43 14 chr5 79013718 79013788 -124071744 + L2 LINE L2 3234 3305 -8 417 98 0 0 chr5 79013926 79013987 -124071545 + MSTB2 LTR MaLR 393 453 -4 365 310 153 29 chr5 79013990 79014303 -124071229 - L2 LINE L2 -345 2969 2618 1794 260 158 48 chr5 79014336 79014846 -124070686 + L1MC5 LINE L1 5707 6160 -1801 2416 96 0 0 chr5 79014846 79015159 -124070373 + AluSq SINE Alu 1 313 0 213 65 0 0 chr5 79015167 79015198 -124070334 + (CCAA)n Simple_repeat Simple_repeat 1 31 0 1794 260 158 48 chr5 79015198 79016341 -124069191 + L1MC5 LINE L1 6166 7597 -364 1208 232 3 0 chr5 79016540 79016833 -124068699 - L1M4 LINE L1 -2325 3821 3528 678 199 7 14 chr5 79016834 79016980 -124068552 - MLT1F LTR MaLR -9 533 389 425 259 74 33 chr5 79016992 79017235 -124068297 - L1MEc LINE L1 -4739 2202 1950 381 22 0 0 chr5 79017241 79017287 -124068245 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 278 21 35 chr5 79017315 79017473 -124068059 - L1MEc LINE L1 -5166 1956 1601 297 244 55 43 chr5 79017501 79017665 -124067867 - L1MEc LINE L1 -5004 1419 1254 366 178 0 0 chr5 79017797 79017870 -124067662 - L1M4 LINE L1 -1582 4564 4492 213 230 13 59 chr5 79018290 79018428 -124067104 + A-rich Low_complexity Low_complexity 3 224 0 204 98 0 89 chr5 79018442 79018554 -124066978 + (CAAAAA)n Simple_repeat Simple_repeat 5 106 0 287 195 19 45 chr5 79018566 79018810 -124066722 + (CA)n Simple_repeat Simple_repeat 1 237 0 2130 214 68 54 chr5 79020078 79021182 -124064350 - L1ME LINE L1 -539 5692 4580 420 265 66 27 chr5 79021461 79021718 -124063814 - L1ME LINE L1 -2281 3934 3668 382 273 69 23 chr5 79021895 79022459 -124063073 - L1ME LINE L1 -4053 2343 1576 1603 217 79 26 chr5 79022567 79023023 -124062509 + MLT1E2 LTR MaLR 147 626 0 305 140 18 0 chr5 79023207 79023264 -124062268 + GA-rich Low_complexity Low_complexity 3 60 0 336 93 0 74 chr5 79023342 79023450 -124062082 + (CAAAAA)n Simple_repeat Simple_repeat 3 102 0 387 283 13 44 chr5 79023450 79023609 -124061923 + GA-rich Low_complexity Low_complexity 5 158 0 509 278 0 40 chr5 79023917 79024043 -124061489 - L2 LINE L2 0 3272 3152 642 262 59 11 chr5 79024043 79024230 -124061302 - MIR SINE MIR -66 196 1 247 336 45 0 chr5 79024534 79024644 -124060888 + L2 LINE L2 1859 1973 -1341 493 272 107 19 chr5 79025245 79025451 -124060081 - L1M4 LINE L1 -1810 4336 4113 1772 219 42 34 chr5 79025513 79026246 -124059286 - L1ME1 LINE L1 -7 6159 5318 283 238 40 48 chr5 79026311 79026437 -124059095 - AluSp/q SINE Alu -25 278 154 246 271 0 17 chr5 79026811 79026870 -124058662 - L2 LINE L2 -18 3254 3197 * 463 258 55 31 chr5 79026852 79026980 -124058552 - MIR SINE MIR -127 135 5 1473 238 98 23 chr5 79028262 79028441 -124057091 - L1ME LINE L1 -5419 977 813 1014 241 111 11 chr5 79028441 79028703 -124056829 - AluJo SINE Alu -13 289 2 1473 238 98 23 chr5 79028703 79029041 -124056491 - L1ME LINE L1 -5583 813 421 1635 182 10 27 chr5 79029042 79029338 -124056194 + AluSx SINE Alu 1 291 -21 917 261 62 7 chr5 79029622 79029894 -124055638 - MLT1J1 LTR MaLR -141 305 19 570 285 198 5 chr5 79030072 79030279 -124055253 - MIR SINE MIR -12 250 4 1456 231 86 25 chr5 79032154 79032781 -124052751 + L1M4 LINE L1 4112 4776 -1370 452 250 0 0 chr5 79032994 79033090 -124052442 + MER21B LTR ERV1 1 96 -767 2534 224 101 27 chr5 79033097 79033832 -124051700 + MER21B LTR ERV1 19 807 -56 6077 72 5 8 chr5 79034153 79034983 -124050549 + L1PA2 LINE L1 5328 6154 -1 2158 93 0 130 chr5 79034983 79035413 -124050119 - THE1C-int LTR MaLR -1206 374 1 2279 117 5 56 chr5 79035413 79035808 -124049724 - THE1C LTR MaLR 0 375 1 549 160 52 77 chr5 79035817 79036011 -124049521 - L1MEc LINE L1 -4064 2332 2144 1754 273 87 48 chr5 79036327 79038365 -124047167 - L1ME3A LINE L1 -27 6143 4023 299 284 9 26 chr5 79038982 79039098 -124046434 + GA-rich Low_complexity Low_complexity 3 116 0 227 226 0 7 chr5 79039734 79039803 -124045729 - MIR SINE MIR -24 184 116 1843 159 80 3 chr5 79039803 79040142 -124045390 + MLT1A1 LTR MaLR 1 365 0 832 138 13 33 chr5 79040198 79040350 -124045182 - AluSg/x SINE Alu -7 303 155 438 289 122 56 chr5 79040585 79040889 -124044643 + HAL1 LINE L1 760 1083 -1424 1771 163 0 37 chr5 79040927 79041250 -124044282 - AluSx SINE Alu 0 312 1 2188 81 3 7 chr5 79041266 79041578 -124043954 - AluY SINE Alu 0 312 2 204 118 20 39 chr5 79041641 79041692 -124043840 + (TA)n Simple_repeat Simple_repeat 2 51 0 4073 145 17 9 chr5 79041918 79042803 -124042729 + L1MA5A LINE L1 5126 6016 -281 207 69 0 0 chr5 79043116 79043145 -124042387 + (TG)n Simple_repeat Simple_repeat 1 29 0 950 202 19 14 chr5 79043291 79043504 -124042028 + MIR SINE MIR 18 231 -31 210 236 0 0 chr5 79044155 79044210 -124041322 + (TG)n Simple_repeat Simple_repeat 2 56 0 361 36 36 0 chr5 79044903 79044958 -124040574 + (GA)n Simple_repeat Simple_repeat 2 58 0 443 200 21 14 chr5 79045339 79045484 -124040048 + CT-rich Low_complexity Low_complexity 1 146 0 2206 76 22 37 chr5 79045862 79046217 -124039315 - THE1B LTR MaLR -14 350 1 314 186 0 17 chr5 79047643 79047702 -124037830 + MLT1L LTR MaLR 7 64 -551 781 305 23 19 chr5 79047740 79047996 -124037536 + MIR SINE MIR 3 259 -3 2171 121 44 0 chr5 79047997 79048295 -124037237 - AluSx SINE Alu -1 311 1 253 264 14 0 chr5 79048338 79048410 -124037122 + MLT1L LTR MaLR 192 264 -351 334 306 19 19 chr5 79100918 79101026 -123984506 + MIR SINE MIR 38 145 -117 2473 90 3 0 chr5 79101406 79101717 -123983815 + AluSq SINE Alu 1 312 -1 2308 120 0 0 chr5 79102672 79102981 -123982551 + AluSg SINE Alu 1 309 -1 533 239 8 0 chr5 79103438 79103555 -123981977 + MIR3 SINE MIR 43 160 -48 198 167 0 0 chr5 79103602 79103638 -123981894 + CT-rich Low_complexity Low_complexity 4 39 0 1905 152 29 19 chr5 79103642 79103951 -123981581 - AluJo SINE Alu 0 312 1 218 250 194 0 chr5 79105010 79105082 -123980450 + L2 LINE L2 3187 3272 0 330 213 27 0 chr5 79105297 79105372 -123980160 + MIR3 SINE MIR 88 164 -44 351 188 227 0 chr5 79105692 79105820 -123979712 - MIR SINE MIR -78 184 28 1916 107 52 7 chr5 79110396 79110695 -123974837 + AluSq SINE Alu 1 311 0 1981 134 0 7 chr5 79111033 79111317 -123974215 + AluJb SINE Alu 9 290 -22 474 300 50 5 chr5 79112684 79112904 -123972628 + MIR SINE MIR 3 232 -30 1825 151 3 14 chr5 79113567 79113880 -123971652 + AluJb SINE Alu 2 311 0 254 318 0 64 chr5 79114143 79114253 -123971279 + MIR3 SINE MIR 95 197 -11 417 123 0 0 chr5 79114612 79114677 -123970855 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 373 591 0 11 chr5 79114634 79114815 -123970717 + polypyrimidine Low_complexity Low_complexity 2 180 0 * 1520 133 9 0 chr5 79114830 79115041 -123970491 - AluJb SINE Alu -17 295 83 21 0 0 0 chr5 79115110 79115131 -123970401 + AT_rich Low_complexity Low_complexity 1 21 0 413 143 0 13 chr5 79117744 79117821 -123967711 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 2334 102 0 0 chr5 79117839 79118134 -123967398 - AluSx SINE Alu -17 295 1 414 0 0 0 chr5 79118557 79118603 -123966929 + (TG)n Simple_repeat Simple_repeat 2 47 0 770 261 18 14 chr5 79120753 79120971 -123964561 + MIR SINE MIR 10 228 -34 453 151 0 0 chr5 79121189 79121275 -123964257 - L1MB8 LINE L1 0 6178 6093 2771 179 48 25 chr5 79121297 79121383 -123964149 - L1MB4 LINE L1 -25 6155 6072 1794 157 0 42 chr5 79121383 79121554 -123963978 - AluJo SINE Alu -13 299 145 2254 103 0 13 chr5 79121554 79121854 -123963678 - AluSg SINE Alu -14 296 1 1794 157 0 42 chr5 79121854 79121994 -123963538 - AluJo SINE Alu -167 145 1 2771 179 48 25 chr5 79121994 79122509 -123963023 - L1MB4 LINE L1 -108 6072 5540 719 234 60 28 chr5 79124114 79124362 -123961170 + MIR SINE MIR 7 262 0 2071 178 61 5 chr5 79124646 79125074 -123960458 - L1MB7 LINE L1 -19 6165 5714 1473 118 4 35 chr5 79125227 79125455 -123960077 + AluJb SINE Alu 86 306 -6 211 271 0 71 chr5 79125632 79125702 -123959830 + L2 LINE L2 3227 3291 -22 183 214 200 14 chr5 79129125 79129195 -123956337 - L3 LINE CR1 -127 1450 1368 758 201 19 19 chr5 79129381 79129540 -123955992 + FRAM SINE Alu 1 159 -7 21 0 0 0 chr5 79129553 79129574 -123955958 + AT_rich Low_complexity Low_complexity 1 21 0 429 221 205 47 chr5 79129596 79129854 -123955678 - L2 LINE L2 -941 2373 2075 201 329 51 22 chr5 79129872 79130009 -123955523 - L3 LINE CR1 -458 1119 979 617 228 101 7 chr5 79130065 79130214 -123955318 - MER69A DNA AcHobo -7 170 8 929 277 182 22 chr5 79130222 79130721 -123954811 - L3 LINE CR1 -651 926 348 207 0 0 0 chr5 79133665 79133688 -123951844 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 443 288 0 33 chr5 79135197 79135381 -123950151 + GA-rich Low_complexity Low_complexity 3 180 0 39 38 0 0 chr5 79140656 79140709 -123944823 + AT_rich Low_complexity Low_complexity 1 53 0 1634 162 0 47 chr5 79140927 79141223 -123944309 + AluJo SINE Alu 16 297 -15 543 244 45 19 chr5 79142416 79142572 -123942960 + MER5B DNA MER1_type 19 178 0 438 147 0 0 chr5 79144160 79144228 -123941304 - FLAM SINE Alu -19 124 57 260 198 0 12 chr5 79145384 79145470 -123940062 + GA-rich Low_complexity Low_complexity 2 86 0 21 57 0 0 chr5 79147307 79147342 -123938190 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr5 79147792 79147813 -123937719 + (T)n Simple_repeat Simple_repeat 1 21 0 989 187 6 6 chr5 79149690 79149856 -123935676 + FRAM SINE Alu 1 166 0 405 0 0 0 chr5 79150280 79150325 -123935207 + (TG)n Simple_repeat Simple_repeat 1 45 0 573 196 18 9 chr5 79150882 79150994 -123934538 - MER81 DNA DNA -1 113 1 2169 269 66 37 chr5 79151510 79152434 -123933098 + L2 LINE L2 2180 3128 -185 1524 112 0 0 chr5 79152467 79152664 -123932868 + AluSx SINE Alu 1 197 -115 365 78 0 0 chr5 79152664 79152715 -123932817 + AluSx SINE Alu 252 302 0 948 171 16 122 chr5 79153854 79154099 -123931433 - MER20 DNA MER1_type 0 219 1 713 287 63 14 chr5 79154295 79154581 -123930951 + LTR16C LTR ERVL 192 491 0 257 308 130 10 chr5 79154605 79154813 -123930719 + MIR SINE MIR 30 262 0 385 256 26 8 chr5 79155124 79155241 -123930291 - L2 LINE L2 -4 3309 3191 634 276 71 86 chr5 79155307 79155713 -123929819 + HERV16 LTR ERVL 1026 1425 -3571 391 256 52 52 chr5 79155715 79155887 -123929645 + LTR16B LTR ERVL 293 464 0 1930 120 4 4 chr5 79156132 79156399 -123929133 - AluSx SINE Alu -38 274 8 214 296 71 51 chr5 79156911 79157009 -123928523 + L2 LINE L2 3186 3285 -28 1395 186 163 12 chr5 79157730 79158134 -123927398 - MLT1C LTR MaLR -2 465 1 2250 119 0 3 chr5 79160068 79160378 -123925154 + AluSx SINE Alu 1 309 -3 198 223 78 58 chr5 79162503 79162606 -123922926 + MIR SINE MIR 23 128 -80 1771 177 14 0 chr5 79163912 79164206 -123921326 + AluJo SINE Alu 3 300 -12 239 316 47 70 chr5 79166340 79166511 -123919021 - L3b LINE CR1 -68 1515 1349 554 233 115 8 chr5 79168243 79168496 -123917036 + L1ME4a LINE L1 5838 6117 -4 1890 169 0 31 chr5 79169685 79170005 -123915527 - AluJo SINE Alu -2 310 1 375 297 188 33 chr5 79170088 79170364 -123915168 + L2 LINE L2 1675 1993 -1321 671 334 126 33 chr5 79170445 79171188 -123914344 + L2 LINE L2 2227 3054 -218 200 263 35 0 chr5 79171489 79171546 -123913986 + L3 LINE CR1 1513 1571 -6 558 207 241 39 chr5 79171558 79171761 -123913771 + MIR SINE MIR 16 259 -3 24 32 0 0 chr5 79173747 79173778 -123911754 + AT_rich Low_complexity Low_complexity 1 31 0 208 147 0 0 chr5 79174282 79174316 -123911216 + (A)n Simple_repeat Simple_repeat 1 34 0 366 318 56 34 chr5 79174525 79174704 -123910828 + MER5A DNA MER1_type 7 189 0 227 300 0 78 chr5 79175062 79175111 -123910421 - MIR3 SINE MIR -6 202 161 276 160 20 0 chr5 79175111 79175161 -123910371 - MER5B DNA MER1_type 0 178 128 195 42 0 0 chr5 79175161 79175185 -123910347 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1575 136 0 0 chr5 79175216 79175459 -123910073 + L1MC1 LINE L1 6051 6293 -40 249 241 89 18 chr5 79175463 79175575 -123909957 + MER34B LTR ERV1 5 124 -441 599 212 146 51 chr5 79175626 79175942 -123909590 + MER34B LTR ERV1 220 565 0 492 320 27 13 chr5 79175969 79176119 -123909413 + MER5B DNA MER1_type 27 178 0 964 167 0 3 chr5 79176717 79176957 -123908575 - AluJb SINE Alu 0 312 1 203 375 67 39 chr5 79177017 79177121 -123908411 + L2 LINE L2 3136 3242 -30 23 0 0 0 chr5 79177642 79177665 -123907867 + AT_rich Low_complexity Low_complexity 1 23 0 1284 155 46 18 chr5 79179475 79179694 -123905838 - AluJo SINE Alu 0 312 88 266 319 32 11 chr5 79179845 79179939 -123905593 + L2 LINE L2 3142 3237 -35 695 170 0 0 chr5 79180865 79180971 -123904561 - AluJo SINE Alu -30 282 177 879 153 0 0 chr5 79180971 79181102 -123904430 - AluJo SINE Alu -171 131 1 697 179 0 8 chr5 79182359 79182475 -123903057 + FLAM_C SINE Alu 1 117 -185 403 71 0 29 chr5 79182475 79182545 -123902987 + (CA)n Simple_repeat Simple_repeat 2 69 0 195 245 49 133 chr5 79183456 79183599 -123901933 - L3 LINE CR1 -67 1510 1380 416 221 27 10 chr5 79183600 79183719 -123901813 - L1ME1 LINE L1 -5 6161 6053 557 130 0 40 chr5 79184234 79184334 -123901198 - FLAM_C SINE Alu -8 135 40 198 0 0 0 chr5 79184425 79184447 -123901085 + (TC)n Simple_repeat Simple_repeat 2 23 0 218 242 0 32 chr5 79185116 79185178 -123900354 + A-rich Low_complexity Low_complexity 1 60 0 383 294 11 0 chr5 79186548 79186640 -123898892 + MIR SINE MIR 58 150 -58 265 149 21 0 chr5 79186650 79186697 -123898835 - Charlie8 DNA MER1_type -1003 1414 1367 225 0 0 0 chr5 79188230 79188255 -123897277 + (A)n Simple_repeat Simple_repeat 1 25 0 200 297 121 22 chr5 79188847 79188938 -123896594 - L2 LINE L2 -19 3294 3195 2258 88 0 3 chr5 79188963 79189259 -123896273 + AluSx SINE Alu 1 295 -17 2432 71 0 10 chr5 79189261 79189571 -123895961 + AluY SINE Alu 1 307 -4 293 243 169 52 chr5 79190118 79190254 -123895278 + MIR SINE MIR 44 195 -67 435 119 0 0 chr5 79190339 79190398 -123895134 - AluJ/FRAM SINE Alu -24 288 230 228 155 121 0 chr5 79190547 79190605 -123894927 + MIR SINE MIR 170 234 -28 313 299 0 11 chr5 79192008 79192143 -123893389 - MIR SINE MIR -1 261 81 554 304 142 9 chr5 79192362 79192908 -123892624 - HAL1 LINE L1 -1757 750 8 724 217 0 0 chr5 79193510 79193639 -123891893 - FLAM_A SINE Alu -4 129 1 2116 130 0 37 chr5 79194588 79194912 -123890620 - AluSx SINE Alu 0 312 1 939 255 45 8 chr5 79195147 79195390 -123890142 - MIR SINE MIR -9 253 2 347 252 47 37 chr5 79196742 79196849 -123888683 + MIR3 SINE MIR 62 169 -39 2311 99 0 3 chr5 79197364 79197668 -123887864 + AluSg SINE Alu 1 303 -7 1231 196 15 101 chr5 79198006 79198403 -123887129 + MLT1A1 LTR MaLR 3 365 0 343 317 30 18 chr5 79198431 79198598 -123886934 + L2 LINE L2 2228 2396 -918 2293 113 7 0 chr5 79198749 79199049 -123886483 + AluSq SINE Alu 1 302 -11 419 275 130 38 chr5 79199347 79199609 -123885923 - L1MC/D LINE L1 -2230 5578 5293 206 77 0 51 chr5 79200400 79200439 -123885093 + (TTAA)n Simple_repeat Simple_repeat 3 39 0 2088 116 11 0 chr5 79200440 79200724 -123884808 - AluSx SINE Alu -25 287 1 234 0 0 0 chr5 79200804 79200830 -123884702 + (TATG)n Simple_repeat Simple_repeat 4 29 0 1572 94 10 0 chr5 79200830 79201033 -123884499 - AluSg/x SINE Alu -29 283 79 313 303 30 0 chr5 79201392 79201524 -123884008 + MER117 DNA MER1_type 15 150 -47 431 260 136 17 chr5 79201669 79201846 -123883686 + MIR SINE MIR 1 198 -64 24 0 0 0 chr5 79202310 79202334 -123883198 + AT_rich Low_complexity Low_complexity 1 24 0 789 173 18 36 chr5 79202334 79202502 -123883030 - FRAM SINE Alu -11 165 1 4043 176 60 9 chr5 79202840 79203944 -123881588 + L1MB5 LINE L1 4981 6141 -33 2049 174 35 30 chr5 79204004 79204463 -123881069 + MLT1C LTR MaLR 3 463 -4 2383 71 0 3 chr5 79206147 79206442 -123879090 + AluY SINE Alu 2 295 -16 211 286 176 17 chr5 79206609 79206728 -123878804 - MIR SINE MIR -42 220 83 380 237 79 9 chr5 79207144 79207258 -123878274 - L2 LINE L2 -2 3311 3190 233 371 155 0 chr5 79208717 79208814 -123876718 + MER91A DNA MER1_type 49 160 -36 240 266 47 0 chr5 79208817 79208881 -123876651 + MER91A DNA MER1_type 124 190 0 289 298 89 55 chr5 79209060 79209476 -123876056 + L1M4 LINE L1 4733 5162 -984 2075 131 0 0 chr5 79209479 79209809 -123875723 + AluSq SINE Alu 1 330 0 2327 250 84 17 chr5 79210092 79211069 -123874463 + L1M4 LINE L1 3485 4526 -1620 627 218 62 44 chr5 79211068 79211293 -123874239 + L1MC4 LINE L1 7572 7800 -242 * 243 0 0 0 chr5 79211589 79211616 -123873916 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 440 232 21 0 chr5 79211698 79211793 -123873739 + MER58B DNA MER1_type 1 97 -244 2643 174 56 6 chr5 79211800 79212318 -123873214 + MER68 LTR ERV1 19 562 0 458 160 34 0 chr5 79212327 79212425 -123873107 + MER58B DNA MER1_type 112 341 0 266 221 31 39 chr5 79212426 79212553 -123872979 + L1MC5 LINE L1 7805 7930 -31 6373 130 48 38 chr5 79212954 79213639 -123871893 - Tigger3b DNA MER2_type -1797 1231 527 2275 117 0 0 chr5 79213639 79213946 -123871586 + AluSx SINE Alu 1 307 -5 6373 130 48 38 chr5 79213946 79214478 -123871054 - Tigger3b DNA MER2_type -2501 527 2 7056 112 13 17 chr5 79214500 79215152 -123870380 + L1PA10 LINE L1 4044 4697 -1471 3713 75 8 19 chr5 79215152 79215671 -123869861 - LTR10D LTR ERV1 0 513 1 7056 112 13 17 chr5 79215671 79216318 -123869214 + L1PA10 LINE L1 4697 5345 -823 2240 115 0 0 chr5 79216318 79216614 -123868918 + AluY SINE Alu 2 297 -14 7056 112 13 17 chr5 79216614 79216974 -123868558 + L1PA10 LINE L1 5345 5705 -463 1811 77 0 0 chr5 79216974 79217194 -123868338 + AluSc SINE Alu 84 303 -6 7056 112 13 17 chr5 79217194 79217667 -123867865 + L1PA10 LINE L1 5705 6168 0 2514 62 0 3 chr5 79217728 79218032 -123867500 + AluY SINE Alu 1 303 -8 628 268 79 74 chr5 79218244 79218885 -123866647 - L1ME3A LINE L1 -222 5948 5314 300 212 114 61 chr5 79218910 79219042 -123866490 - L1ME3A LINE L1 -875 5271 5133 774 165 0 0 chr5 79219045 79219166 -123866366 + FLAM_C SINE Alu 4 124 -19 281 26 0 26 chr5 79219223 79219262 -123866270 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 441 255 94 81 chr5 79219303 79219868 -123865664 - L1ME3A LINE L1 -1005 5141 4570 448 240 245 29 chr5 79220780 79220984 -123864548 - MIR SINE MIR -14 248 1 194 300 0 0 chr5 79221521 79221571 -123863961 + MIR SINE MIR 36 85 -123 23 33 0 0 chr5 79221972 79222002 -123863530 + AT_rich Low_complexity Low_complexity 1 30 0 243 383 65 19 chr5 79222637 79222791 -123862741 - MIR3 SINE MIR -28 180 20 231 273 15 30 chr5 79223088 79223154 -123862378 - L3 LINE CR1 -5 1572 1508 1761 159 3 41 chr5 79223696 79224010 -123861522 + AluJo SINE Alu 1 302 -10 366 265 59 7 chr5 79224335 79224471 -123861061 - L1MC4a LINE L1 -1921 5887 5745 587 271 7 0 chr5 79224515 79224655 -123860877 - L1MC4a LINE L1 -2148 5660 5520 1438 184 7 80 chr5 79225082 79225381 -123860151 - AluJo SINE Alu -30 282 6 1232 203 45 31 chr5 79225799 79226154 -123859378 + L1ME LINE L1 4637 4996 -1150 23 54 0 0 chr5 79226211 79226248 -123859284 + AT_rich Low_complexity Low_complexity 1 37 0 584 163 11 79 chr5 79226416 79226517 -123859015 + L1ME LINE L1 4998 5083 -1063 2034 110 55 31 chr5 79226517 79226843 -123858689 + MER1B DNA MER1_type 3 336 -1 584 163 11 79 chr5 79226843 79226919 -123858613 + L1ME LINE L1 5083 5163 -983 2156 127 16 0 chr5 79226920 79227227 -123858305 + AluSx SINE Alu 1 312 0 1000 238 124 1 chr5 79227259 79227562 -123857970 + L1ME LINE L1 5397 5734 -436 2326 76 3 13 chr5 79227770 79228072 -123857460 - AluY SINE Alu -12 299 1 1687 172 35 10 chr5 79228986 79229276 -123856256 - AluJb SINE Alu -15 297 1 194 318 94 24 chr5 79230126 79230211 -123855321 + MIR SINE MIR 91 181 -81 23 54 0 0 chr5 79230347 79230384 -123855148 + AT_rich Low_complexity Low_complexity 1 37 0 1647 173 164 2 chr5 79230880 79231301 -123854231 - Charlie4a DNA MER1_type -3 505 17 270 298 13 19 chr5 79231591 79231749 -123853783 + T-rich Low_complexity Low_complexity 2 158 0 189 0 0 0 chr5 79231766 79231787 -123853745 + (T)n Simple_repeat Simple_repeat 1 21 0 396 241 0 12 chr5 79233173 79233256 -123852276 + L2 LINE L2 3182 3263 -9 180 0 0 0 chr5 79233878 79233898 -123851634 + (CAA)n Simple_repeat Simple_repeat 2 21 0 286 221 21 42 chr5 79234116 79234211 -123851321 - L1MC/D LINE L1 -2036 5772 5680 1102 166 104 0 chr5 79234386 79234597 -123850935 + MER46A DNA MER2_type 1 233 -3 228 35 0 0 chr5 79234598 79234627 -123850905 + (TG)n Simple_repeat Simple_repeat 2 30 0 586 291 186 10 chr5 79234632 79235045 -123850487 + L1MC4a LINE L1 5446 5931 -1877 233 364 91 7 chr5 79235956 79236110 -123849422 + MIR SINE MIR 40 206 -56 386 259 207 26 chr5 79236555 79236748 -123848784 + MIR SINE MIR 35 262 0 23 0 0 0 chr5 79237379 79237402 -123848130 + AT_rich Low_complexity Low_complexity 1 23 0 5653 120 33 13 chr5 79237514 79238063 -123847469 + L1PA16 LINE L1 5044 5581 -585 2115 17 0 0 chr5 79238063 79238300 -123847232 + AluYb8 SINE Alu 78 314 -4 5653 120 33 13 chr5 79238300 79238842 -123846690 + L1PA16 LINE L1 5581 6164 -2 186 103 0 0 chr5 79238863 79238892 -123846640 + (A)n Simple_repeat Simple_repeat 1 29 0 1925 263 319 12 chr5 79239312 79240395 -123845137 + L2 LINE L2 1300 2715 -599 242 290 110 58 chr5 79241820 79241975 -123843557 - MER5B DNA MER1_type 0 178 16 349 330 126 41 chr5 79242068 79242577 -123842955 + L1MEd LINE L1 88 639 -5566 440 264 17 68 chr5 79242592 79242877 -123842655 + L1MA10 LINE L1 5909 6332 -2 382 198 125 10 chr5 79242882 79242978 -123842554 + L1MEd LINE L1 1040 1146 -5059 308 276 120 58 chr5 79242981 79243332 -123842200 + L1MEd LINE L1 1252 1637 -4759 808 169 0 0 chr5 79243332 79243462 -123842070 + FLAM_A SINE Alu 4 133 0 308 276 120 58 chr5 79243462 79243544 -123841988 + L1MEd LINE L1 1637 1712 -4684 365 261 181 21 chr5 79243832 79244237 -123841295 + L1MEd LINE L1 2144 2565 -3650 235 138 35 17 chr5 79245079 79245137 -123840395 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1530 253 88 25 chr5 79245714 79246506 -123839026 + L1MC5 LINE L1 7062 7903 -58 769 216 64 90 chr5 79246515 79246633 -123838899 + L1MC5 LINE L1 7502 7622 -339 2009 113 17 3 chr5 79246633 79246933 -123838599 + AluSg SINE Alu 1 304 -6 769 216 64 90 chr5 79246933 79247202 -123838330 + L1MC5 LINE L1 7622 7879 -82 591 241 128 5 chr5 79247239 79247434 -123838098 + L1ME3A LINE L1 5944 6162 -8 1997 98 21 3 chr5 79248833 79249120 -123836412 - AluSg SINE Alu -18 292 1 445 297 28 7 chr5 79249425 79249570 -123835962 + MER20B DNA MER1_type 30 177 -606 3011 246 111 38 chr5 79249570 79250961 -123834571 + L1MC4 LINE L1 6490 7991 -51 2530 131 57 0 chr5 79250961 79251365 -123834167 + MSTC LTR MaLR 2 428 0 3011 246 111 38 chr5 79251365 79251411 -123834121 + L1MC4 LINE L1 7991 8032 -10 1942 110 7 11 chr5 79251413 79251721 -123833811 + AluSx SINE Alu 2 308 0 1021 245 92 42 chr5 79251788 79252182 -123833350 + MER20B DNA MER1_type 225 651 -132 2247 93 7 3 chr5 79252182 79252473 -123833059 - AluSg SINE Alu -13 297 6 1021 245 92 42 chr5 79252473 79252580 -123832952 + MER20B DNA MER1_type 651 751 -32 1706 174 38 14 chr5 79253953 79254241 -123831291 - 7SLRNA srpRNA srpRNA -20 300 6 240 311 40 0 chr5 79254563 79254637 -123830895 + L2 LINE L2 3196 3272 0 3791 177 20 63 chr5 79254657 79254879 -123830653 + L1MB8 LINE L1 5146 5376 -802 1809 148 0 0 chr5 79254879 79255143 -123830389 + AluJb SINE Alu 47 310 -2 3791 177 20 63 chr5 79255143 79255921 -123829611 + L1MB8 LINE L1 5376 6108 -70 2153 115 10 3 chr5 79255921 79256226 -123829306 - AluSq SINE Alu -6 307 1 3791 177 20 63 chr5 79256226 79256295 -123829237 + L1MB8 LINE L1 6108 6178 0 2400 93 3 0 chr5 79256306 79256616 -123828916 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr5 79256909 79256930 -123828602 + AT_rich Low_complexity Low_complexity 1 21 0 2133 99 16 26 chr5 79256933 79257236 -123828296 - AluSp SINE Alu -13 300 1 819 143 0 0 chr5 79257239 79257365 -123828167 - AluSg/x SINE Alu -5 305 180 818 241 56 44 chr5 79257365 79257484 -123828048 + MER2 DNA MER2_type 23 139 -206 1140 118 95 24 chr5 79257484 79257695 -123827837 + MER30 DNA MER1_type 3 228 -2 818 241 56 44 chr5 79257695 79257894 -123827638 + MER2 DNA MER2_type 139 345 0 2205 86 21 0 chr5 79258071 79258362 -123827170 + AluSp SINE Alu 1 297 -16 2238 75 16 10 chr5 79259090 79259397 -123826135 - AluSg SINE Alu 0 310 2 2268 60 3 3 chr5 79260355 79260660 -123824872 - AluSg SINE Alu 0 305 1 534 277 129 5 chr5 79260826 79261028 -123824504 - MIR SINE MIR -34 228 2 186 150 0 50 chr5 79261244 79261284 -123824248 - MIR SINE MIR -57 151 114 250 233 0 0 chr5 79262094 79262154 -123823378 + MER5A DNA MER1_type 12 71 -118 397 224 86 40 chr5 79262209 79262361 -123823171 + MER112 DNA MER1_type 4 162 -98 1736 192 14 0 chr5 79262427 79262719 -123822813 + AluJb SINE Alu 1 296 -16 310 199 43 75 chr5 79262719 79262880 -123822652 + L1MC5 LINE L1 7757 7912 -49 1412 148 79 45 chr5 79263196 79263486 -123822046 - AluJo SINE Alu -8 304 5 2260 112 0 0 chr5 79264480 79264776 -123820756 - AluSx SINE Alu -16 296 1 310 271 194 7 chr5 79264965 79265120 -123820412 - MIR SINE MIR -50 212 29 329 333 36 0 chr5 79265841 79265952 -123819580 - MER5B DNA MER1_type 0 178 64 202 336 92 8 chr5 79266323 79266454 -123819078 + L2 LINE L2 2148 2289 -1025 182 278 0 56 chr5 79266449 79266503 -123819029 - L2 LINE L2 0 3272 3222 * 192 389 49 33 chr5 79266627 79266871 -123818661 + L2 LINE L2 2430 2677 -637 2099 124 6 25 chr5 79267010 79267325 -123818207 - AluSx SINE Alu -3 309 1 329 174 121 47 chr5 79267407 79267556 -123817976 + L1ME4a LINE L1 5961 6120 -1 805 279 119 34 chr5 79267644 79268129 -123817403 - MLT1H LTR MaLR 0 549 19 333 309 63 6 chr5 79268264 79268439 -123817093 - L1ME4a LINE L1 -259 5862 5678 312 261 11 23 chr5 79268458 79268546 -123816986 - L1ME4a LINE L1 -497 5624 5538 736 241 59 11 chr5 79269243 79269430 -123816102 - MIR SINE MIR -65 197 2 2392 69 0 26 chr5 79269487 79269793 -123815739 - AluY SINE Alu -13 298 1 200 244 22 0 chr5 79270703 79270748 -123814784 + L2 LINE L2 3230 3275 -38 429 294 81 15 chr5 79271407 79271543 -123813989 - MIR SINE MIR -13 249 105 237 278 43 90 chr5 79271825 79272124 -123813408 + L1ME4a LINE L1 5836 6120 -1 834 191 165 13 chr5 79272358 79272594 -123812938 + MER33 DNA MER1_type 26 297 -27 440 243 278 67 chr5 79272712 79273083 -123812449 + L2 LINE L2 2839 3287 -26 1591 139 57 4 chr5 79273162 79273406 -123812126 + L1MA8 LINE L1 5994 6256 -35 1579 152 9 67 chr5 79273406 79273721 -123811811 - AluJo SINE Alu -15 297 1 1591 139 57 4 chr5 79273721 79273756 -123811776 + L1MA8 LINE L1 6256 6288 -3 2457 82 3 0 chr5 79274099 79274404 -123811128 - AluSg SINE Alu -4 306 1 2688 7 0 0 chr5 79274745 79275030 -123810502 + AluYb8 SINE Alu 23 307 -11 304 261 202 25 chr5 79275947 79276066 -123809466 + L2 LINE L2 3132 3271 -1 1402 83 0 11 chr5 79276105 79276286 -123809246 + AluSg/x SINE Alu 124 302 -10 215 382 0 0 chr5 79276562 79276630 -123808902 + MIR SINE MIR 16 83 -125 858 198 125 16 chr5 79276699 79276891 -123808641 - MER58C DNA MER1_type -2 213 1 2233 113 10 0 chr5 79277069 79277371 -123808161 + AluSx SINE Alu 1 305 -7 347 313 8 15 chr5 79278710 79278844 -123806688 - MIR3 SINE MIR -28 180 48 428 274 91 97 chr5 79279171 79279624 -123805908 - L1M4 LINE L1 -3556 2590 2141 392 323 41 18 chr5 79279910 79280130 -123805402 - HAL1b LINE L1 -418 930 706 578 207 9 113 chr5 79280207 79280420 -123805112 - HAL1b LINE L1 -767 581 391 1394 100 4 108 chr5 79280508 79280759 -123804773 - AluSg/x SINE Alu 0 310 86 1055 104 7 0 chr5 79280759 79280894 -123804638 - AluSq/x SINE Alu -171 141 6 1553 173 20 37 chr5 79281012 79281312 -123804220 + AluJo SINE Alu 1 295 -17 2333 97 0 10 chr5 79281316 79281662 -123803870 + AluY SINE Alu 1 343 0 25 31 0 0 chr5 79282632 79282664 -123802868 + AT_rich Low_complexity Low_complexity 1 32 0 383 286 38 0 chr5 79282981 79283086 -123802446 + MIR SINE MIR 153 261 -1 2132 106 3 10 chr5 79283787 79284079 -123801453 + AluSc SINE Alu 1 290 -19 451 271 75 32 chr5 79284098 79284180 -123801352 + MIR SINE MIR 67 144 -118 8093 89 9 22 chr5 79284180 79285265 -123800267 - MER11C LTR ERVK 0 1071 1 451 271 75 32 chr5 79285265 79285370 -123800162 + MIR SINE MIR 144 262 0 320 283 65 49 chr5 79286598 79286756 -123798776 - MIR SINE MIR -69 139 17 2060 144 0 3 chr5 79286959 79287257 -123798275 + AluSx SINE Alu 1 297 -15 449 288 81 6 chr5 79287587 79287747 -123797785 - L3b LINE CR1 -172 1411 1240 1065 295 90 43 chr5 79288549 79289037 -123796495 - MLT1J LTR MaLR 0 511 1 1987 211 79 12 chr5 79289738 79290169 -123795363 - LTR40b LTR ERVL 0 462 3 344 239 0 0 chr5 79290401 79290468 -123795064 + L1ME LINE L1 5589 5655 -466 1979 125 57 17 chr5 79291043 79291396 -123794136 - THE1C LTR MaLR -8 367 1 438 282 69 40 chr5 79291493 79291667 -123793865 - MIR SINE MIR -63 199 21 2142 98 0 0 chr5 79291706 79291982 -123793550 - AluSc SINE Alu -13 296 21 860 293 124 8 chr5 79292566 79292928 -123792604 + L2 LINE L2 1293 1696 -1618 1370 276 111 58 chr5 79292928 79293680 -123791852 + L1MC4a LINE L1 4478 4839 -1307 2025 105 70 0 chr5 79293680 79293965 -123791567 + AluSc SINE Alu 1 305 -4 1370 276 111 58 chr5 79293965 79294555 -123790977 + L1MC4a LINE L1 4839 5396 -750 537 136 104 8 chr5 79294638 79294763 -123790769 - L1 LINE L1 -1770 4376 4240 785 198 47 0 chr5 79294764 79294956 -123790576 + L1MA7 LINE L1 6084 6284 -7 36 23 0 0 chr5 79294965 79295008 -123790524 + AT_rich Low_complexity Low_complexity 1 43 0 230 274 49 85 chr5 79295027 79295191 -123790341 + L1MC4a LINE L1 6084 6241 -1567 986 328 120 12 chr5 79296594 79297186 -123788346 + L2 LINE L2 2188 2843 -471 1235 163 195 16 chr5 79297407 79297658 -123787874 - AluJo SINE Alu -6 296 1 195 289 48 24 chr5 79299091 79299174 -123786358 - MIR3 SINE MIR 0 208 124 487 286 8 0 chr5 79299174 79299307 -123786225 + BSR/Beta Satellite Satellite 5 138 -14 210 290 129 16 chr5 79299323 79299385 -123786147 - MIR3 SINE MIR -131 77 9 534 189 63 0 chr5 79299469 79299596 -123785936 + MIR SINE MIR 118 252 -10 2097 130 0 19 chr5 79300231 79300546 -123784986 - AluSx SINE Alu -3 309 1 836 257 196 24 chr5 79300742 79301184 -123784348 - MLT1G1 LTR MaLR -1 594 26 404 320 79 38 chr5 79301218 79301622 -123783910 + L2 LINE L2 2725 3257 -15 1879 184 50 3 chr5 79301722 79302065 -123783467 + MLT1A1 LTR MaLR 7 365 0 219 333 30 0 chr5 79302250 79302349 -123783183 - L2 LINE L2 -1 3312 3211 912 225 17 0 chr5 79302810 79302983 -123782549 - MER5A DNA MER1_type -7 182 7 223 218 40 79 chr5 79303806 79303907 -123781625 - L2 LINE L2 -90 3223 3127 234 379 0 0 chr5 79304229 79304316 -123781216 - MIR SINE MIR -82 180 94 2037 129 0 7 chr5 79305491 79305797 -123779735 + AluSq SINE Alu 1 304 0 701 273 88 5 chr5 79305799 79306004 -123779528 - MIR SINE MIR -25 237 16 272 295 276 26 chr5 79309817 79309973 -123775559 + MER91A DNA MER1_type 2 196 0 849 202 195 23 chr5 79310013 79310418 -123775114 + L2 LINE L2 2715 3196 -117 242 329 0 0 chr5 79310473 79310549 -123774983 + MER58 DNA MER1_type 173 248 -2172 * 521 177 0 0 chr5 79310541 79310620 -123774912 + MER58 DNA MER1_type 2342 2420 0 489 170 53 0 chr5 79310622 79310716 -123774816 + L2 LINE L2 3191 3289 -24 485 231 46 0 chr5 79310716 79310824 -123774708 - MER20 DNA MER1_type -105 114 2 2073 99 3 24 chr5 79310885 79311212 -123774320 + AluSg SINE Alu 1 310 0 1271 200 46 68 chr5 79311482 79311852 -123773680 + L1ME1 LINE L1 5788 6149 -17 281 384 23 0 chr5 79313211 79313344 -123772188 - MIR SINE MIR -94 168 33 295 300 152 42 chr5 79313539 79313776 -123771756 + L2 LINE L2 3005 3267 -5 398 257 138 13 chr5 79313837 79313989 -123771543 + MIR SINE MIR 89 259 -3 2551 186 65 29 chr5 79313991 79314512 -123771020 + MLT1F LTR MaLR 3 542 0 1133 152 14 29 chr5 79316558 79316768 -123768764 - AluJo SINE Alu -94 218 12 441 252 42 17 chr5 79317924 79318043 -123767489 + MIR SINE MIR 17 138 -70 4878 176 43 10 chr5 79318855 79319689 -123765843 + MER21B LTR ERV1 1 862 -1 258 254 18 0 chr5 79320347 79320424 -123765108 + MIR SINE MIR 71 139 -69 271 306 131 22 chr5 79320490 79320673 -123764859 + MIR3 SINE MIR 3 205 -3 2229 109 6 6 chr5 79322089 79322400 -123763132 + AluSx SINE Alu 1 311 -1 416 308 134 18 chr5 79322411 79322897 -123762635 + L1MC4a LINE L1 5328 5555 -804 317 229 56 35 chr5 79323142 79323286 -123762246 + L1ME4a LINE L1 5974 6120 -1 280 249 221 17 chr5 79323995 79324176 -123761356 + L2 LINE L2 2566 2783 -531 2286 122 0 0 chr5 79324908 79325220 -123760312 - AluSx SINE Alu 0 312 1 220 271 62 31 chr5 79325404 79325500 -123760032 + MIR SINE MIR 31 129 -133 357 75 0 0 chr5 79326102 79326155 -123759377 + (TC)n Simple_repeat Simple_repeat 2 54 0 243 0 0 0 chr5 79326155 79326182 -123759350 + (CA)n Simple_repeat Simple_repeat 1 27 0 180 278 0 56 chr5 79326582 79326654 -123758878 - L3 LINE CR1 -803 774 707 293 308 135 0 chr5 79326746 79326850 -123758682 - L2 LINE L2 -3 3310 3193 522 308 44 22 chr5 79326924 79327151 -123758381 + MIR SINE MIR 20 251 -11 550 306 133 21 chr5 79328132 79328699 -123756833 - L2 LINE L2 -56 3257 2566 201 167 0 0 chr5 79329160 79329196 -123756336 + (TG)n Simple_repeat Simple_repeat 1 36 0 2276 102 3 3 chr5 79329793 79330096 -123755436 - AluSq SINE Alu -10 303 1 1531 242 45 11 chr5 79330902 79331258 -123754274 + MLT1A2 LTR MaLR 1 368 -6 2100 212 63 18 chr5 79332668 79333546 -123751986 - L1MB7 LINE L1 -19 6165 5101 423 159 0 0 chr5 79333885 79333948 -123751584 + FLAM_A SINE Alu 59 121 -21 190 343 69 10 chr5 79334210 79334312 -123751220 + MIR SINE MIR 36 143 -65 1850 82 122 4 chr5 79335051 79335329 -123750203 + AluSq SINE Alu 1 308 0 245 212 119 34 chr5 79335780 79335898 -123749634 + LTR33 LTR ERVL 2 129 -392 1565 189 0 26 chr5 79336830 79337142 -123748390 + AluJb SINE Alu 1 304 -8 3337 87 22 24 chr5 79337356 79337818 -123747714 - MER4C LTR ERV1 -4 461 1 225 132 0 0 chr5 79337959 79337997 -123747535 + (T)n Simple_repeat Simple_repeat 1 38 0 210 158 0 26 chr5 79339625 79339663 -123745869 + CT-rich Low_complexity Low_complexity 2 38 0 390 276 53 128 chr5 79339667 79340047 -123745485 + L2 LINE L2 2818 3154 -118 4244 130 50 43 chr5 79340047 79340769 -123744763 + LTR8A LTR ERV1 1 727 0 390 276 53 128 chr5 79340769 79340880 -123744652 + L2 LINE L2 3154 3272 0 1740 191 0 3 chr5 79341016 79341310 -123744222 + AluJo SINE Alu 1 293 -19 410 224 224 0 chr5 79343069 79343221 -123742311 + MIR SINE MIR 10 195 -67 191 280 20 0 chr5 79343226 79343276 -123742256 - MER5A DNA MER1_type -3 186 136 475 291 38 13 chr5 79343509 79343667 -123741865 - MIR SINE MIR -94 168 7 1056 158 6 0 chr5 79343753 79343918 -123741614 + MER5A DNA MER1_type 6 171 -18 251 250 0 0 chr5 79344375 79344427 -123741105 + LTR30 LTR ERV1 1 52 -670 1205 120 49 26 chr5 79344427 79344653 -123740879 + LTR12 LTR ERV1 55 1983 -455 281 300 10 0 chr5 79344740 79344840 -123740692 + LTR30 LTR ERV1 524 624 -98 699 191 32 0 chr5 79344841 79344967 -123740565 + LTR12 LTR ERV1 360 489 -225 417 189 0 0 chr5 79345145 79345219 -123740313 + FLAM_A SINE Alu 59 132 -10 473 242 118 7 chr5 79346191 79346344 -123739188 - MIR SINE MIR -11 251 82 510 276 77 11 chr5 79346680 79346861 -123738671 - MIR SINE MIR -1 261 69 215 219 0 0 chr5 79348015 79348056 -123737476 + (CTTA)n Simple_repeat Simple_repeat 1 41 0 2116 196 44 15 chr5 79348621 79349075 -123736457 - MLT1C LTR MaLR 0 467 1 345 228 72 111 chr5 79349209 79349389 -123736143 - LTR33A LTR ERVL -1 522 350 362 271 99 17 chr5 79349571 79349752 -123735780 - L1ME4a LINE L1 -1 6120 5925 228 286 39 0 chr5 79349816 79349893 -123735639 - L1ME4a LINE L1 -2005 5803 5724 256 242 186 16 chr5 79349895 79350019 -123735513 - L2 LINE L2 -148 3165 3021 192 306 0 0 chr5 79350742 79350791 -123734741 + L2 LINE L2 3201 3249 -23 1197 279 62 11 chr5 79352123 79352557 -123732975 - L2 LINE L2 -2 3311 2856 400 281 6 56 chr5 79352536 79352696 -123732836 - L2 LINE L2 -665 2649 2498 * 1196 211 244 4 chr5 79352737 79353250 -123732282 - L2 LINE L2 -991 2323 1688 417 294 128 11 chr5 79353449 79353731 -123731801 - L1ME4a LINE L1 -208 5913 5599 21 0 0 0 chr5 79353970 79353991 -123731541 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr5 79355312 79355347 -123730185 + (TG)n Simple_repeat Simple_repeat 2 36 0 276 356 72 14 chr5 79355705 79355913 -123729619 - L3 LINE CR1 -2 1575 1356 583 180 308 50 chr5 79356196 79356245 -123729287 - MIR SINE MIR -9 253 218 261 0 0 0 chr5 79356245 79356274 -123729258 + (TG)n Simple_repeat Simple_repeat 2 30 0 583 180 308 50 chr5 79356274 79356410 -123729122 - MIR SINE MIR -44 218 118 686 225 104 17 chr5 79356410 79356583 -123728949 - MER5A DNA MER1_type 0 189 2 583 180 308 50 chr5 79356583 79356598 -123728934 - MIR SINE MIR -144 118 9 902 168 31 0 chr5 79358074 79358235 -123727297 - AluJo SINE Alu -15 297 132 248 0 0 30 chr5 79358235 79358268 -123727264 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2247 71 0 0 chr5 79358268 79358549 -123726983 - AluY SINE Alu -30 281 1 445 195 46 0 chr5 79358599 79358686 -123726846 - AluJo SINE Alu -173 139 49 21 0 0 0 chr5 79358917 79358938 -123726594 + AT_rich Low_complexity Low_complexity 1 21 0 552 293 164 33 chr5 79359003 79359338 -123726194 - L3 LINE CR1 -412 1165 787 470 307 67 36 chr5 79359596 79359821 -123725711 - L3 LINE CR1 -825 752 521 2445 60 0 19 chr5 79359822 79360139 -123725393 + AluY SINE Alu 1 311 0 897 127 0 0 chr5 79360370 79360488 -123725044 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr5 79360488 79360509 -123725023 + AT_rich Low_complexity Low_complexity 1 21 0 210 366 45 9 chr5 79360524 79360636 -123724896 - L3 LINE CR1 -1383 194 79 255 257 0 59 chr5 79361309 79361410 -123724122 - LTR67 LTR ERVL -2 555 461 8355 95 32 75 chr5 79361502 79362860 -123722672 - HSMAR2 DNA Mariner -2 1300 2 262 289 22 44 chr5 79362865 79362955 -123722577 - LTR67 LTR ERVL -356 201 114 * 277 312 11 65 chr5 79362898 79363084 -123722448 - MLT1K LTR MaLR -411 177 2 727 189 85 34 chr5 79365747 79365957 -123719575 + MLT1F LTR MaLR 367 528 -14 418 243 92 58 chr5 79366121 79366294 -123719238 - L1MC/D LINE L1 -2009 5799 5621 730 235 69 40 chr5 79366982 79367229 -123718303 + MER112 DNA MER1_type 1 254 -2 702 284 76 13 chr5 79367873 79368109 -123717423 - MIR SINE MIR 0 262 12 280 295 39 54 chr5 79368119 79368248 -123717284 - MIR SINE MIR -124 138 12 480 293 0 38 chr5 79368998 79369131 -123716401 + L2 LINE L2 3145 3272 0 2874 132 16 16 chr5 79369719 79370151 -123715381 + MSTB1 LTR MaLR 1 432 0 22 0 0 0 chr5 79370292 79370314 -123715218 + AT_rich Low_complexity Low_complexity 1 22 0 4029 149 31 44 chr5 79370403 79370628 -123714904 + L1MB4 LINE L1 5423 5649 -531 1204 179 279 24 chr5 79370628 79370969 -123714563 + MSTC LTR MaLR 1 428 0 4029 149 31 44 chr5 79370969 79371487 -123714045 + L1MB4 LINE L1 5649 6158 -22 1910 132 19 42 chr5 79371487 79371797 -123713735 - AluSx SINE Alu -9 303 1 4029 149 31 44 chr5 79371797 79371817 -123713715 + L1MB4 LINE L1 6158 6177 -3 256 103 0 0 chr5 79371844 79371883 -123713649 - L1MB3 LINE L1 -77 6106 6068 302 363 50 19 chr5 79372045 79372205 -123713327 - L1M4b LINE L1 -6466 393 229 665 268 86 18 chr5 79372244 79372464 -123713068 - L1M4b LINE L1 -6613 246 12 243 152 0 0 chr5 79374294 79374340 -123711192 + A-rich Low_complexity Low_complexity 1 46 0 402 311 111 17 chr5 79375295 79375475 -123710057 + L2 LINE L2 2570 2766 -548 189 0 0 0 chr5 79375852 79375873 -123709659 + (TA)n Simple_repeat Simple_repeat 2 22 0 459 314 43 0 chr5 79375875 79376015 -123709517 + L2 LINE L2 2927 3072 -241 1149 336 87 49 chr5 79376035 79377228 -123708304 + ERVL LTR ERVL 3959 5197 -567 1812 182 29 18 chr5 79377239 79377611 -123707921 - MLT1A2 LTR MaLR 0 549 1 989 281 110 13 chr5 79377898 79378289 -123707243 + LTR16A LTR ERVL 14 442 -8 2476 82 10 0 chr5 79378570 79378876 -123706656 - AluSc SINE Alu 0 309 1 680 290 48 0 chr5 79378903 79379110 -123706422 - MIR SINE MIR -26 236 20 632 225 23 0 chr5 79380219 79380348 -123705184 + MER94 DNA DNA 1 132 -2 683 267 6 35 chr5 79381877 79382049 -123703483 + MER5B DNA MER1_type 7 173 -5 2240 110 0 16 chr5 79382214 79382523 -123703009 - AluSx SINE Alu -8 304 1 600 265 72 24 chr5 79384021 79384270 -123701262 + L1ME LINE L1 5548 5808 -313 447 277 61 20 chr5 79385683 79385831 -123699701 + MIR SINE MIR 22 175 -87 463 333 37 4 chr5 79386351 79386532 -123699000 + MIR SINE MIR 4 186 -66 757 260 62 21 chr5 79387327 79387569 -123697963 - MIR SINE MIR -10 252 1 1965 118 42 10 chr5 79388811 79389099 -123696433 - AluSx SINE Alu -15 297 1 185 300 100 0 chr5 79389294 79389374 -123696158 + L2 LINE L2 3220 3307 -6 21 57 0 0 chr5 79390891 79390926 -123694606 + AT_rich Low_complexity Low_complexity 1 35 0 409 235 98 8 chr5 79391017 79391149 -123694383 + MIR SINE MIR 119 262 0 195 129 0 0 chr5 79391813 79391844 -123693688 + (GA)n Simple_repeat Simple_repeat 2 32 0 188 258 161 32 chr5 79392694 79392787 -123692745 + L3b LINE CR1 1290 1394 -189 704 259 78 6 chr5 79394458 79394624 -123690908 + MER45A DNA AcHobo 1 178 0 1843 265 62 14 chr5 79395360 79396130 -123689402 - L1M4 LINE L1 -2475 3671 2865 4383 163 27 15 chr5 79397734 79398540 -123686992 - L1MA6 LINE L1 -1 6299 5484 1006 239 153 88 chr5 79400088 79400657 -123684875 - L2 LINE L2 -559 2755 2150 564 364 61 14 chr5 79402162 79402456 -123683076 + L2 LINE L2 2931 3238 -75 21 0 0 0 chr5 79402686 79402707 -123682825 + AT_rich Low_complexity Low_complexity 1 21 0 493 340 37 46 chr5 79403252 79403687 -123681845 + L2 LINE L2 1747 2177 -1137 3554 191 26 17 chr5 79404375 79404563 -123680969 - L1 LINE L1 -3034 3112 2927 1778 143 3 38 chr5 79404563 79404883 -123680649 + AluSx SINE Alu 1 310 0 3554 191 26 17 chr5 79404883 79405458 -123680074 - L1 LINE L1 -3219 2927 2341 234 0 0 0 chr5 79407359 79407385 -123678147 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 37 69 0 0 chr5 79407605 79407677 -123677855 + AT_rich Low_complexity Low_complexity 1 72 0 25 31 0 0 chr5 79407796 79407828 -123677704 + AT_rich Low_complexity Low_complexity 1 32 0 6498 106 6 2 chr5 79407974 79408879 -123676653 + L1P3 LINE L1 129 1036 -5425 4092 85 4 0 chr5 79408877 79409420 -123676112 + L1P LINE L1 3966 4510 -1636 * 354 85 0 0 chr5 79409420 79409467 -123676065 + Alu SINE Alu 243 289 -13 231 306 274 19 chr5 79409467 79409624 -123675908 + L1MCc LINE L1 411 607 -5816 6048 176 59 10 chr5 79409815 79410790 -123674742 + L1 LINE L1 3274 4325 -1821 1670 180 14 3 chr5 79410790 79411084 -123674448 - AluSq SINE Alu -16 297 1 6048 176 59 10 chr5 79411084 79411356 -123674176 + L1 LINE L1 4325 4582 -1564 728 236 7 0 chr5 79411457 79411605 -123673927 - L1MCa LINE L1 -6273 153 5 1256 221 74 21 chr5 79411635 79411960 -123673572 - MER2 DNA MER2_type 0 344 3 714 112 147 0 chr5 79412517 79412633 -123672899 + L1MCa LINE L1 392 524 -5902 219 139 0 0 chr5 79412954 79412990 -123672542 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 862 141 36 12 chr5 79413006 79413320 -123672212 + CT-rich Low_complexity Low_complexity 1 321 0 387 198 111 48 chr5 79413377 79413503 -123672029 - MIR SINE MIR -10 252 119 201 263 66 13 chr5 79415629 79415705 -123669827 - L2 LINE L2 -54 3259 3180 2309 60 0 0 chr5 79415858 79416142 -123669390 - L1PA7 LINE L1 -7 6147 5864 2266 93 9 3 chr5 79416142 79416465 -123669067 + L1PA7 LINE L1 5522 5846 -308 335 219 81 46 chr5 79417289 79417425 -123668107 + MIR SINE MIR 7 161 -47 411 160 168 56 chr5 79417722 79417847 -123667685 - L2 LINE L2 0 3313 3175 189 311 16 0 chr5 79417851 79417912 -123667620 + MIR SINE MIR 197 258 -4 287 249 119 51 chr5 79418387 79418564 -123666968 + L2 LINE L2 3041 3229 -84 757 282 63 30 chr5 79419317 79419863 -123665669 - L2 LINE L2 -145 3168 2606 499 97 80 211 chr5 79419883 79420058 -123665474 + AluSx SINE Alu 2 153 -159 227 386 23 0 chr5 79423202 79423334 -123662198 + MIR3 SINE MIR 50 184 -24 2722 46 0 0 chr5 79423542 79423849 -123661683 - AluY SINE Alu -4 307 1 298 207 215 16 chr5 79424193 79424314 -123661218 + MIR SINE MIR 105 249 -13 305 320 40 0 chr5 79427346 79427471 -123658061 - MIR3 SINE MIR -29 179 50 2146 125 0 16 chr5 79428041 79428380 -123657152 - AluSx SINE Alu 0 338 5 2272 115 3 0 chr5 79430312 79430617 -123654915 + AluSg SINE Alu 1 306 -4 267 295 104 6 chr5 79431315 79431488 -123654044 + MIR SINE MIR 4 193 -69 357 303 0 0 chr5 79432078 79432167 -123653365 + L2 LINE L2 3205 3293 -20 405 227 97 0 chr5 79434776 79434896 -123650636 + L1ME1 LINE L1 6031 6164 0 1325 194 110 0 chr5 79435297 79435395 -123650137 + AluJo SINE Alu 1 87 -225 219 69 0 0 chr5 79435395 79435424 -123650108 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1325 194 110 0 chr5 79435424 79435588 -123649944 + AluJo SINE Alu 87 292 -20 598 106 0 0 chr5 79437392 79437477 -123648055 - FLAM_A SINE Alu -16 126 42 244 352 80 16 chr5 79437621 79437746 -123647786 - L2 LINE L2 -4 3268 3136 380 265 128 21 chr5 79438715 79438949 -123646583 + MLT1J LTR MaLR 253 511 0 297 89 0 0 chr5 79440177 79440222 -123645310 + (CA)n Simple_repeat Simple_repeat 2 46 0 200 209 0 0 chr5 79440938 79440981 -123644551 - MIR3 SINE MIR -2 206 164 345 242 149 60 chr5 79441523 79441738 -123643794 + L2 LINE L2 3049 3282 -31 368 263 15 58 chr5 79441789 79441926 -123643606 + MER5B DNA MER1_type 48 178 0 316 268 0 0 chr5 79443183 79443254 -123642278 - MIR SINE MIR -112 150 80 997 230 10 20 chr5 79443260 79443464 -123642068 - MER58A DNA MER1_type -22 202 1 442 281 53 8 chr5 79443889 79444072 -123641460 - MIR SINE MIR -65 143 4 890 127 0 42 chr5 79444814 79444956 -123640576 + AluJo SINE Alu 1 136 -176 21 36 0 0 chr5 79444956 79444984 -123640548 + AT_rich Low_complexity Low_complexity 1 28 0 332 216 69 0 chr5 79446854 79446956 -123638576 - L1ME4a LINE L1 -69 6052 5944 639 225 41 6 chr5 79446996 79447165 -123638367 - L1ME4a LINE L1 -404 5717 5543 342 0 0 0 chr5 79448279 79448317 -123637215 + (TG)n Simple_repeat Simple_repeat 1 38 0 766 184 102 62 chr5 79449470 79449736 -123635796 - L1MC5 LINE L1 -36 7925 7643 2776 3 0 0 chr5 79449736 79450049 -123635483 + AluYa5 SINE Alu 2 314 0 766 184 102 62 chr5 79450049 79450085 -123635447 - L1MC5 LINE L1 -318 7643 7610 207 323 0 0 chr5 79450331 79450393 -123635139 - MIR SINE MIR -81 127 66 591 228 50 42 chr5 79450508 79450708 -123634824 + MER33 DNA MER1_type 1 191 -106 1753 275 48 2 chr5 79450997 79451756 -123633776 + L2 LINE L2 2502 3306 -7 2155 112 10 7 chr5 79452299 79452603 -123632929 - AluSg SINE Alu -1 309 5 2037 135 0 16 chr5 79453458 79453761 -123631771 + AluSx SINE Alu 3 300 -12 199 235 20 0 chr5 79454397 79454448 -123631084 + MIR SINE MIR 103 154 -108 1021 251 53 117 chr5 79454451 79454626 -123630906 + MLT1I LTR MaLR 19 204 -205 830 156 0 15 chr5 79454626 79454761 -123630771 + FLAM_C SINE Alu 1 133 0 1021 251 53 117 chr5 79454761 79455003 -123630529 + MLT1I LTR MaLR 204 409 0 234 132 0 0 chr5 79455052 79455090 -123630442 + L2 LINE L2 3223 3260 -12 558 258 40 31 chr5 79456158 79456365 -123629167 - MER20B DNA MER1_type -6 213 1 368 255 189 37 chr5 79456988 79457211 -123628321 + MIR SINE MIR 7 258 -4 183 42 0 0 chr5 79458064 79458088 -123627444 + (CAA)n Simple_repeat Simple_repeat 2 25 0 694 293 15 0 chr5 79458807 79459005 -123626527 - MIR SINE MIR -3 259 59 2021 129 0 57 chr5 79459338 79459655 -123625877 - AluSg SINE Alu -11 299 1 294 328 0 17 chr5 79459822 79459938 -123625594 + MIR SINE MIR 79 192 -70 21 0 0 0 chr5 79460442 79460463 -123625069 + AT_rich Low_complexity Low_complexity 1 21 0 327 291 137 11 chr5 79460883 79461065 -123624467 - MIR SINE MIR -57 205 1 198 302 226 0 chr5 79461301 79461407 -123624125 - MIR3 SINE MIR -21 187 58 304 289 25 8 chr5 79461568 79461689 -123623843 - L1MC4a LINE L1 -1875 5933 5811 3758 206 35 31 chr5 79461700 79463060 -123622472 - L1ME1 LINE L1 -5 6161 4805 985 252 116 33 chr5 79463074 79463531 -123622001 - L1MC4a LINE L1 -2001 5807 5313 252 291 20 26 chr5 79463784 79463935 -123621597 - L1P LINE L1 -1115 5031 4882 341 22 0 0 chr5 79465067 79465112 -123620420 - AluSc SINE Alu 0 299 255 182 224 303 0 chr5 79465973 79466049 -123619483 + MER5A DNA MER1_type 67 165 -24 490 224 158 18 chr5 79466327 79466492 -123619040 - MER5A DNA MER1_type 0 189 2 532 171 73 41 chr5 79467702 79467825 -123617707 - L2 LINE L2 0 3313 3187 2189 107 0 3 chr5 79468427 79468717 -123616815 + AluSx SINE Alu 3 291 -21 267 31 0 0 chr5 79469114 79469146 -123616386 + (CA)n Simple_repeat Simple_repeat 2 33 0 493 336 27 0 chr5 79469158 79469307 -123616225 - MIR3 SINE MIR -46 162 10 423 202 0 0 chr5 79469617 79469706 -123615826 + (CA)n Simple_repeat Simple_repeat 1 89 0 565 320 81 13 chr5 79470346 79470580 -123614952 - MIR SINE MIR 0 262 13 264 100 0 0 chr5 79472888 79472928 -123612604 + (TC)n Simple_repeat Simple_repeat 2 41 0 205 167 28 0 chr5 79473039 79473075 -123612457 + GA-rich Low_complexity Low_complexity 1 37 0 729 68 17 8 chr5 79474229 79474347 -123611185 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 1173 246 91 31 chr5 79475882 79476334 -123609198 - L1ME3A LINE L1 -14 6156 5678 221 312 25 64 chr5 79476898 79477055 -123608477 + MIR SINE MIR 91 241 -21 * 648 268 70 58 chr5 79477010 79477253 -123608279 - MIR SINE MIR -10 252 7 342 320 43 54 chr5 79477545 79477833 -123607699 - L2 LINE L2 -183 3089 2641 3352 156 16 72 chr5 79477907 79478639 -123606893 - LTR8 LTR ERV1 0 691 1 4195 178 60 4 chr5 79479229 79480000 -123605532 - MER21B LTR ERV1 -49 814 1 2290 91 0 3 chr5 79480134 79480420 -123605112 - AluSx SINE Alu -11 301 17 595 203 8 24 chr5 79480420 79480543 -123604989 + MLT1F1 LTR MaLR 183 303 -264 24 32 0 0 chr5 79480742 79480773 -123604759 + AT_rich Low_complexity Low_complexity 1 31 0 1462 166 3 91 chr5 79481456 79481601 -123603931 + AluJo SINE Alu 1 106 -206 2286 75 7 7 chr5 79481601 79481894 -123603638 - AluY SINE Alu -18 293 1 1462 166 3 91 chr5 79481894 79482055 -123603477 + AluJo SINE Alu 106 280 -32 203 77 0 26 chr5 79482055 79482094 -123603438 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 1836 236 107 14 chr5 79482123 79482636 -123602896 + MLT1F1 LTR MaLR 7 567 0 341 259 89 9 chr5 79483221 79483333 -123602199 + L2 LINE L2 3193 3313 0 200 33 0 33 chr5 79483893 79483923 -123601609 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 2556 255 57 59 chr5 79485150 79486418 -123599114 - L1ME LINE L1 -4820 1260 27 525 272 113 67 chr5 79486533 79486904 -123598628 - MLT1H LTR MaLR -62 487 100 269 352 0 0 chr5 79487069 79487177 -123598355 - MIR SINE MIR -97 165 58 277 301 65 13 chr5 79487191 79487344 -123598188 - L2 LINE L2 -157 3156 2996 423 0 0 0 chr5 79487607 79487654 -123597878 + (TA)n Simple_repeat Simple_repeat 2 48 0 305 343 76 14 chr5 79487762 79487972 -123597560 + L1MEd LINE L1 90 312 -5893 375 300 29 77 chr5 79488165 79488478 -123597054 + L1MEd LINE L1 613 910 -5295 403 307 25 44 chr5 79488492 79488857 -123596675 + L1MEd LINE L1 1255 1612 -4784 26 64 0 0 chr5 79488866 79488913 -123596619 + AT_rich Low_complexity Low_complexity 1 47 0 24 32 0 0 chr5 79489036 79489067 -123596465 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr5 79489209 79489250 -123596282 + AT_rich Low_complexity Low_complexity 1 41 0 251 283 14 14 chr5 79489315 79489453 -123596079 + L1MEd LINE L1 2135 2272 -4124 296 331 123 15 chr5 79489516 79489646 -123595886 + MIR3 SINE MIR 20 163 -45 753 283 78 54 chr5 79490013 79490511 -123595021 + Charlie7 DNA MER1_type 126 635 -1977 374 204 134 23 chr5 79490566 79490738 -123594794 + Charlie7 DNA MER1_type 2417 2607 -5 220 254 100 55 chr5 79490838 79490948 -123594584 + MIR3 SINE MIR 7 121 -87 195 237 175 44 chr5 79491070 79491184 -123594348 - MIR SINE MIR -15 247 119 1410 267 73 66 chr5 79491185 79491773 -123593759 + MLT1E LTR MaLR 2 593 0 1906 164 14 0 chr5 79491781 79492074 -123593458 + AluJb SINE Alu 7 303 -9 1935 150 40 0 chr5 79492104 79492404 -123593128 - AluSx SINE Alu 0 312 1 464 268 64 106 chr5 79492703 79493091 -123592441 - L1MEd LINE L1 -1097 1393 923 206 331 21 63 chr5 79493918 79494060 -123591472 - MIR3 SINE MIR -64 144 9 266 209 77 22 chr5 79494331 79494422 -123591110 + MLT1L LTR MaLR 139 234 -381 323 292 84 6 chr5 79494554 79494732 -123590800 + MLT1L LTR MaLR 423 614 -1 1131 167 93 58 chr5 79494779 79495090 -123590442 - MER33 DNA MER1_type 0 324 3 1810 171 112 3 chr5 79496303 79496660 -123588872 - MSTD LTR MaLR 0 396 1 898 227 6 0 chr5 79496668 79496840 -123588692 + MER5B DNA MER1_type 1 173 -5 396 125 0 0 chr5 79497331 79497395 -123588137 + (TC)n Simple_repeat Simple_repeat 2 65 0 2475 47 3 31 chr5 79497779 79498096 -123587436 + AluY SINE Alu 1 308 -3 1259 262 117 66 chr5 79498236 79498556 -123586976 + L1ME LINE L1 6 308 -5762 2036 136 0 26 chr5 79498556 79498864 -123586668 + AluSx SINE Alu 4 303 -9 1259 262 117 66 chr5 79498864 79499070 -123586462 + L1ME LINE L1 308 502 -5568 303 109 250 0 chr5 79499070 79499134 -123586398 - MADE1 DNA Mariner 0 80 1 1259 262 117 66 chr5 79499134 79499359 -123586173 + L1ME LINE L1 502 796 -5274 363 250 67 0 chr5 79499858 79499962 -123585570 + MER103 DNA DNA 11 121 -45 749 329 104 24 chr5 79500054 79500468 -123585064 - L2 LINE L2 0 3313 2867 1187 235 27 0 chr5 79500599 79500897 -123584635 + L1ME2 LINE L1 5536 5841 -323 3200 211 61 37 chr5 79500911 79501930 -123583602 + L1ME LINE L1 4140 5198 -902 3297 80 7 20 chr5 79501930 79502378 -123583154 + MLT2A1 LTR ERVL 1 442 -2 3200 211 61 37 chr5 79502378 79502664 -123582868 + L1ME LINE L1 5198 5476 -624 407 306 16 0 chr5 79502819 79502940 -123582592 - MIR SINE MIR -38 224 102 280 325 81 38 chr5 79503145 79503305 -123582227 + MIR SINE MIR 46 212 -50 208 260 158 55 chr5 79503472 79503599 -123581933 - L2 LINE L2 -10 3303 3164 779 263 104 22 chr5 79504605 79504875 -123580657 - LTR16C LTR ERVL 0 491 200 336 246 82 41 chr5 79505640 79505762 -123579770 + MIR SINE MIR 111 237 -25 187 244 24 0 chr5 79505731 79505772 -123579760 + L2 LINE L2 3218 3259 -13 * 2761 7 0 0 chr5 79505772 79506071 -123579461 + AluY SINE Alu 1 299 -12 15229 168 13 22 chr5 79507963 79509806 -123575726 - L1MA4 LINE L1 -8 7711 5854 3904 39 6 16 chr5 79509806 79510294 -123575238 - L1PA5 LINE L1 -3 6151 5669 15229 168 13 22 chr5 79510294 79510395 -123575137 - L1MA4 LINE L1 -1865 5854 5754 2111 121 0 19 chr5 79510395 79510702 -123574830 - AluY SINE Alu -10 301 1 15229 168 13 22 chr5 79510702 79513184 -123572348 - L1MA4 LINE L1 -1965 5754 3317 1182 203 10 0 chr5 79513237 79513439 -123572093 - AluJo SINE Alu -108 204 1 2463 217 42 20 chr5 79513439 79514175 -123571357 - L1MA4 LINE L1 -4342 3223 2472 591 226 57 33 chr5 79514177 79514389 -123571143 - L1ME3A LINE L1 -272 5898 5682 328 252 77 28 chr5 79514785 79514928 -123570604 - Charlie2a DNA MER1_type 0 2862 2713 * 634 187 38 57 chr5 79514917 79515126 -123570406 - Charlie2a DNA MER1_type -1192 1670 1466 201 108 0 0 chr5 79515169 79515206 -123570326 + (GCTG)n Simple_repeat Simple_repeat 4 40 0 489 219 50 17 chr5 79515206 79515325 -123570207 - Charlie2b DNA MER1_type -2101 681 559 344 238 63 48 chr5 79515334 79515460 -123570072 - Charlie2b DNA MER1_type -2482 300 173 231 114 0 0 chr5 79516013 79516048 -123569484 + (GAAAA)n Simple_repeat Simple_repeat 4 38 0 2444 51 7 10 chr5 79517310 79517604 -123567928 - AluY SINE Alu -8 303 11 234 0 0 0 chr5 79518562 79518588 -123566944 + (T)n Simple_repeat Simple_repeat 1 26 0 1881 74 0 0 chr5 79519886 79520115 -123565417 - AluY SINE Alu -3 308 80 335 219 81 46 chr5 79520593 79520729 -123564803 + MIR SINE MIR 7 161 -47 411 160 168 56 chr5 79521026 79521151 -123564381 - L2 LINE L2 0 3313 3175 197 306 16 0 chr5 79521155 79521217 -123564315 + MIR SINE MIR 197 259 -3 421 252 185 38 chr5 79521691 79521929 -123563603 + L2 LINE L2 3041 3313 0 275 196 333 0 chr5 79523126 79523228 -123562304 + MIR3 SINE MIR 57 192 -16 370 339 36 6 chr5 79523767 79523935 -123561597 + MIR SINE MIR 20 192 -70 586 315 54 14 chr5 79523943 79524219 -123561313 - LTR67 LTR ERVL 0 557 271 283 273 164 8 chr5 79524711 79524839 -123560693 - MER5B DNA MER1_type 0 178 31 1379 197 46 43 chr5 79525129 79525434 -123560098 + AluJo SINE Alu 1 306 -6 705 253 184 60 chr5 79525974 79526402 -123559130 + LTR67 LTR ERVL 7 495 -62 1874 124 60 37 chr5 79526402 79526701 -123558831 - AluSq SINE Alu -7 306 1 705 253 184 60 chr5 79526701 79526722 -123558810 + LTR67 LTR ERVL 495 512 -45 1172 271 53 30 chr5 79526722 79527412 -123558120 + L2 LINE L2 2608 3313 0 605 245 92 0 chr5 79527769 79527932 -123557600 - MIR SINE MIR -11 251 74 405 316 51 36 chr5 79528016 79528269 -123557263 + MIR SINE MIR 5 261 -1 216 135 0 0 chr5 79528272 79528309 -123557223 + (TTA)n Simple_repeat Simple_repeat 2 38 0 236 234 0 0 chr5 79528404 79528451 -123557081 - MER5B DNA MER1_type -45 133 87 456 269 38 6 chr5 79528633 79528793 -123556739 + MIR SINE MIR 84 248 -14 2680 137 26 7 chr5 79529314 79529731 -123555801 - MSTA LTR MaLR 0 428 4 371 21 21 0 chr5 79529883 79529931 -123555601 + (CA)n Simple_repeat Simple_repeat 2 50 0 241 316 188 0 chr5 79530557 79530690 -123554842 - MIR3 SINE MIR -16 192 35 205 132 0 53 chr5 79532080 79532098 -123553434 + (GAAAA)n Simple_repeat Simple_repeat 5 22 -18 2252 116 3 3 chr5 79532098 79532409 -123553123 + AluSq SINE Alu 1 311 -2 205 132 0 53 chr5 79532409 79532428 -123553104 + (GAAAA)n Simple_repeat Simple_repeat 22 40 0 414 193 45 11 chr5 79533380 79533468 -123552064 - MIR SINE MIR -59 203 113 848 271 190 20 chr5 79533510 79533957 -123551575 + LTR33A LTR ERVL 1 523 0 200 333 12 24 chr5 79533957 79534041 -123551491 - MIR SINE MIR -178 84 2 30 27 0 0 chr5 79534471 79534508 -123551024 + AT_rich Low_complexity Low_complexity 1 37 0 530 214 0 0 chr5 79535863 79535966 -123549566 + MER103 DNA DNA 12 114 -52 200 167 42 0 chr5 79536265 79536313 -123549219 + GA-rich Low_complexity Low_complexity 4 53 0 39 60 0 0 chr5 79536623 79536690 -123548842 + AT_rich Low_complexity Low_complexity 1 67 0 201 319 0 0 chr5 79537807 79537854 -123547678 + (CATG)n Simple_repeat Simple_repeat 3 49 0 276 30 0 0 chr5 79538404 79538437 -123547095 + (TC)n Simple_repeat Simple_repeat 2 34 0 2290 147 28 38 chr5 79538660 79539222 -123546310 + MLT2A2 LTR ERVL 1 554 0 850 263 57 11 chr5 79540767 79541048 -123544484 + L2 LINE L2 2566 2859 -455 475 257 38 117 chr5 79541065 79541407 -123544125 + L2 LINE L2 2990 3304 -9 347 279 80 80 chr5 79541698 79541899 -123543633 - L2 LINE L2 -452 2862 2662 363 44 0 0 chr5 79541929 79541974 -123543558 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 851 165 108 52 chr5 79541974 79542168 -123543364 - MLT2C2 LTR ERVL -13 451 247 254 264 11 44 chr5 79542177 79542268 -123543264 + L2 LINE L2 1814 1901 -1413 184 137 59 39 chr5 79542265 79542316 -123543216 + L2 LINE L2 2194 2245 -1069 * 1169 142 18 142 chr5 79542334 79542609 -123542923 - MLT2D LTR ERVL -173 241 1 1140 258 48 7 chr5 79542609 79542904 -123542628 - L2 LINE L2 -655 2659 2353 44827 40 3 1 chr5 79542907 79549048 -123536484 + L1PA4 LINE L1 1 6155 0 493 333 40 0 chr5 79549050 79549227 -123536305 - L2 LINE L2 -939 2375 2192 287 281 21 10 chr5 79549227 79549323 -123536209 - L2 LINE L2 -1418 1896 1800 356 253 20 10 chr5 79549358 79549457 -123536075 - MIR SINE MIR -66 142 43 493 233 68 68 chr5 79550448 79550624 -123534908 - MIR3 SINE MIR -2 206 31 235 308 117 0 chr5 79551786 79551906 -123533626 - L2 LINE L2 -1 3312 3179 228 348 52 13 chr5 79551976 79552098 -123533434 + L2 LINE L2 3153 3284 -29 1627 169 58 140 chr5 79552098 79552689 -123532843 + MLT1F LTR MaLR 1 542 0 228 348 52 13 chr5 79552689 79552721 -123532811 + L2 LINE L2 3284 3313 0 316 248 11 14 chr5 79553776 79553892 -123531640 - MLT1L LTR MaLR -299 273 98 22 80 0 0 chr5 79554635 79554685 -123530847 + AT_rich Low_complexity Low_complexity 1 50 0 230 0 33 0 chr5 79554795 79554825 -123530707 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 189 273 18 91 chr5 79555412 79555522 -123530010 + MIR SINE MIR 111 212 -50 246 305 0 0 chr5 79555858 79555917 -123529615 - MIR SINE MIR -120 88 30 2217 135 42 0 chr5 79556689 79557023 -123528509 + MER7A DNA MER2_type 1 346 0 305 363 90 27 chr5 79557424 79557901 -123527631 - L2 LINE L2 -650 2664 2158 264 220 70 40 chr5 79558686 79558786 -123526746 - MIR SINE MIR 0 262 160 491 257 70 21 chr5 79558800 79558987 -123526545 - MIR SINE MIR -59 203 8 257 289 11 11 chr5 79558996 79559086 -123526446 - MIR SINE MIR -120 142 53 1990 124 8 0 chr5 79559169 79559460 -123526072 + AluSg1 SINE Alu 14 306 0 317 222 71 40 chr5 79559839 79559938 -123525594 - L2 LINE L2 0 3272 3171 952 284 144 21 chr5 79559939 79560361 -123525171 + LTR16C LTR ERVL 6 479 -12 807 159 50 16 chr5 79562130 79562312 -123523220 + MER53 DNA DNA 1 188 -1 2415 96 50 19 chr5 79563789 79564153 -123521379 - THE1C LTR MaLR 0 375 1 2814 122 49 55 chr5 79564208 79564701 -123520831 - LTR2B LTR ERV1 0 490 1 288 229 48 24 chr5 79566757 79566839 -123518693 - LTR33A LTR ERVL -5 518 435 334 194 56 0 chr5 79566839 79566911 -123518621 - LTR16C LTR ERVL 0 491 416 350 233 12 23 chr5 79566914 79567000 -123518532 - MER63 DNA MER1_type -971 90 6 185 291 18 18 chr5 79567201 79567256 -123518276 - L3 LINE CR1 -5 1572 1518 3055 168 47 36 chr5 79567259 79567901 -123517631 - L1MB5 LINE L1 0 6174 5526 392 246 153 0 chr5 79567907 79568025 -123517507 - MIR3 SINE MIR -62 146 11 452 319 93 60 chr5 79568731 79569268 -123516264 - L2 LINE L2 -5 3267 2713 325 171 43 14 chr5 79569659 79569729 -123515803 - MER5A DNA MER1_type -77 112 41 2382 90 3 0 chr5 79570959 79571258 -123514274 + AluSp SINE Alu 6 305 -8 189 0 0 0 chr5 79572152 79572173 -123513359 + (CTG)n Simple_repeat Simple_repeat 1 21 0 213 359 39 0 chr5 79572245 79572348 -123513184 - L3 LINE CR1 -18 1559 1453 783 273 38 74 chr5 79572351 79572413 -123513119 - LTR16B LTR ERVL 0 464 401 2548 83 0 0 chr5 79572413 79572725 -123512807 + AluSx SINE Alu 1 312 0 783 273 38 74 chr5 79572725 79573054 -123512478 - LTR16B LTR ERVL -63 401 87 1958 79 12 0 chr5 79573551 79573805 -123511727 + L1PB2 LINE L1 5893 6149 -2 315 71 0 0 chr5 79574185 79574227 -123511305 + (CA)n Simple_repeat Simple_repeat 2 43 0 865 238 43 30 chr5 79574539 79574774 -123510758 + L1ME2 LINE L1 5839 6076 -88 481 227 109 0 chr5 79574852 79574962 -123510570 - MER63 DNA MER1_type -84 752 5 335 211 13 0 chr5 79574964 79575040 -123510492 + L1ME2 LINE L1 6079 6155 -9 2298 72 3 14 chr5 79575606 79575897 -123509635 + AluSc SINE Alu 1 288 -21 288 302 10 0 chr5 79576109 79576205 -123509327 - L1MC/D LINE L1 -2026 5782 5686 337 200 0 13 chr5 79576205 79576280 -123509252 - MER116 DNA Mariner 0 80 7 475 296 158 12 chr5 79576292 79576539 -123508993 - L1MC/D LINE L1 -2149 5659 5377 268 200 20 0 chr5 79578611 79578661 -123506871 - L2 LINE L2 -2 3311 3261 6545 125 18 21 chr5 79578810 79579938 -123505594 - L1MA8 LINE L1 -4 6287 5172 1997 125 7 7 chr5 79579938 79580233 -123505299 - AluY SINE Alu 0 311 17 6545 125 18 21 chr5 79580233 79580383 -123505149 - L1MA8 LINE L1 -1119 5172 5023 491 302 60 11 chr5 79580493 79580675 -123504857 + MIR SINE MIR 10 200 -62 405 195 10 128 chr5 79580938 79581004 -123504528 + L1ME2 LINE L1 4142 4214 -1932 2098 138 0 13 chr5 79581004 79581316 -123504216 - AluJb SINE Alu -3 309 2 405 195 10 128 chr5 79581316 79581444 -123504088 + L1ME2 LINE L1 4214 4313 -1833 306 0 0 0 chr5 79581458 79581492 -123504040 + (TG)n Simple_repeat Simple_repeat 2 35 0 2991 217 126 16 chr5 79581492 79582976 -123502556 + L1ME2 LINE L1 4511 6162 -2 1599 149 23 50 chr5 79583493 79583795 -123501737 - AluJo SINE Alu -14 298 5 2799 0 0 0 chr5 79586313 79586607 -123498925 - AluYa8 SINE Alu -7 303 10 578 385 83 39 chr5 79586872 79587558 -123497974 + L3 LINE CR1 69 784 -793 386 307 43 12 chr5 79587712 79587875 -123497657 + MIR SINE MIR 91 258 -4 939 337 51 10 chr5 79587897 79588307 -123497225 + L3 LINE CR1 879 1305 -272 1546 74 11 0 chr5 79591380 79591570 -123493962 + AluSg/x SINE Alu 105 296 -16 6796 79 12 22 chr5 79592169 79593925 -123491607 + L1PA13 LINE L1 4413 6160 -3 196 382 0 29 chr5 79595073 79595175 -123490357 - MIR SINE MIR -80 128 30 369 0 0 0 chr5 79595332 79595373 -123490159 + (CA)n Simple_repeat Simple_repeat 1 41 0 1209 233 96 42 chr5 79597439 79597847 -123487685 - LTR16A LTR ERVL 0 450 21 280 361 8 16 chr5 79598403 79598525 -123487007 + MIR SINE MIR 24 144 -64 392 314 70 16 chr5 79598592 79598777 -123486755 - MIR3 SINE MIR -10 198 4 477 233 58 17 chr5 79599712 79599832 -123485700 + MIR3 SINE MIR 31 155 -53 717 294 137 20 chr5 79600267 79600727 -123484805 - LTR33 LTR ERVL -1 520 7 180 0 0 0 chr5 79600811 79600831 -123484701 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 79600831 79600855 -123484677 + AT_rich Low_complexity Low_complexity 1 24 0 362 198 79 124 chr5 79601199 79601376 -123484156 + MIR SINE MIR 29 197 -65 7914 39 0 0 chr5 79601381 79602681 -123482851 + L1PA4 LINE L1 4845 6151 -4 208 283 19 0 chr5 79602741 79602794 -123482738 + G-rich Low_complexity Low_complexity 3 56 0 475 179 19 0 chr5 79602794 79602900 -123482632 + GA-rich Low_complexity Low_complexity 1 108 0 278 225 56 113 chr5 79603480 79603622 -123481910 + L2 LINE L2 3163 3296 -17 2383 127 0 26 chr5 79604319 79604665 -123480867 - MER1B DNA MER1_type 0 337 1 781 228 39 89 chr5 79604754 79605013 -123480519 - MLT1J LTR MaLR -34 477 232 2190 85 31 10 chr5 79605087 79605380 -123480152 - AluSq SINE Alu -14 299 1 29 70 0 0 chr5 79606042 79606099 -123479433 + AT_rich Low_complexity Low_complexity 1 57 0 2170 156 56 26 chr5 79606375 79606392 -123479140 - MER57A LTR ERV1 0 403 388 2315 126 0 0 chr5 79606392 79606702 -123478830 + AluSg SINE Alu 1 310 0 2170 156 56 26 chr5 79606702 79607075 -123478457 - MER57A LTR ERV1 -15 388 1 329 307 127 54 chr5 79608739 79608905 -123476627 + MIR SINE MIR 15 192 -70 482 252 133 66 chr5 79609304 79609530 -123476002 - MIR SINE MIR -15 247 7 980 10 0 0 chr5 79609837 79609941 -123475591 - L1PA5 LINE L1 -6 6148 6045 610 237 11 45 chr5 79610262 79610439 -123475093 + MER5B DNA MER1_type 8 178 0 454 281 21 47 chr5 79610721 79610913 -123474619 + MER5A DNA MER1_type 2 188 -1 539 239 133 17 chr5 79612298 79612532 -123473000 - MIR SINE MIR 0 262 2 22 0 0 0 chr5 79612533 79612555 -123472977 + AT_rich Low_complexity Low_complexity 1 22 0 684 242 109 4 chr5 79612560 79612769 -123472763 - MIR SINE MIR -2 260 32 337 233 222 30 chr5 79613689 79613955 -123471577 - L1ME4a LINE L1 -2 6119 5803 492 273 43 32 chr5 79614369 79614556 -123470976 - MIR SINE MIR -26 236 48 649 255 12 0 chr5 79615420 79615581 -123469951 + MER33 DNA MER1_type 9 171 -153 2067 110 3 3 chr5 79615751 79616033 -123469499 - L1PA8A LINE L1 -5 6126 5845 901 150 6 0 chr5 79616041 79616201 -123469331 + MER33 DNA MER1_type 192 352 -11 504 263 122 6 chr5 79616848 79617004 -123468528 + MER5A DNA MER1_type 14 187 -2 966 293 18 69 chr5 79617016 79617463 -123468069 + MLT1K LTR MaLR 5 428 -160 438 285 51 0 chr5 79617515 79617652 -123467880 + MER91B DNA MER1_type 45 188 -2 374 212 59 0 chr5 79617668 79617753 -123467779 + MLT1K LTR MaLR 491 580 -8 517 286 76 8 chr5 79617922 79618160 -123467372 - LTR16C LTR ERVL 0 491 238 245 111 0 0 chr5 79618213 79618249 -123467283 - LTR16A1 LTR ERVL -419 38 3 192 194 0 0 chr5 79618298 79618334 -123467198 + MIR3 SINE MIR 151 186 -22 262 263 101 10 chr5 79618815 79618914 -123466618 + MIR SINE MIR 111 218 -44 438 251 83 0 chr5 79619297 79619438 -123466094 + MIR3 SINE MIR 30 189 -19 2950 149 56 10 chr5 79620577 79621081 -123464451 + L1MB2 LINE L1 5643 6169 -2 213 178 0 0 chr5 79621511 79621556 -123463976 + T-rich Low_complexity Low_complexity 1 45 0 382 342 81 17 chr5 79621614 79621848 -123463684 + MIR SINE MIR 14 262 0 254 260 0 0 chr5 79622517 79622567 -123462965 - L2 LINE L2 -3 3310 3261 870 139 0 0 chr5 79622793 79622958 -123462574 + (TGGA)n Simple_repeat Simple_repeat 2 166 0 948 225 101 4 chr5 79622973 79623319 -123462213 - LTR16C LTR ERVL -1 490 75 373 219 35 53 chr5 79624173 79624287 -123461245 - MER103 DNA DNA -1 165 54 204 163 23 0 chr5 79624409 79624452 -123461080 + L2 LINE L2 2935 2978 -294 864 142 77 26 chr5 79624452 79624607 -123460925 + LTR40c LTR ERVL 14 176 -289 265 283 108 30 chr5 79624976 79625142 -123460390 + LTR16A LTR ERVL 18 196 -254 336 185 31 0 chr5 79625261 79625326 -123460206 + LTR16A LTR ERVL 378 444 -6 510 256 8 8 chr5 79625576 79625701 -123459831 + MER5B DNA MER1_type 3 127 -51 244 259 49 12 chr5 79625698 79625779 -123459753 + MIR SINE MIR 91 174 -88 * 861 274 14 0 chr5 79626178 79626397 -123459135 + MIR SINE MIR 41 262 0 280 283 242 20 chr5 79626896 79627094 -123458438 - MLT1L LTR MaLR -18 597 356 228 273 42 122 chr5 79627071 79627357 -123458175 - MLT1J LTR MaLR -213 298 36 * 434 241 0 0 chr5 79627464 79627551 -123457981 + L2 LINE L2 3226 3312 -1 232 206 147 0 chr5 79627666 79627734 -123457798 - MIR SINE MIR -103 159 82 454 243 59 40 chr5 79627802 79627954 -123457578 - MIR3 SINE MIR -29 179 25 513 218 18 9 chr5 79628290 79628400 -123457132 - MER81 DNA DNA 0 114 4 535 266 68 17 chr5 79628634 79628834 -123456698 - MIR SINE MIR -50 212 3 467 302 88 10 chr5 79628943 79629148 -123456384 - MIR SINE MIR -8 254 34 2577 53 3 28 chr5 79629924 79630243 -123455289 + AluY SINE Alu 1 311 0 259 280 76 6 chr5 79630545 79630672 -123454860 - MIR SINE MIR -6 256 47 2182 131 0 0 chr5 79631300 79631606 -123453926 + AluSx SINE Alu 1 306 -6 308 273 214 27 chr5 79631739 79631926 -123453606 - MIR SINE MIR 0 262 41 2790 164 39 37 chr5 79631928 79632470 -123453062 + MER67A LTR ERV1 1 543 0 603 130 0 0 chr5 79633240 79633340 -123452192 + (TG)n Simple_repeat Simple_repeat 2 101 0 2283 196 28 28 chr5 79633529 79633989 -123451543 + LTR40b LTR ERVL 3 462 0 2421 8 0 0 chr5 79634629 79634887 -123450645 + AluYb8 SINE Alu 53 310 -8 1308 104 0 0 chr5 79635075 79635258 -123450274 + L1P3 LINE L1 1 183 -6278 1935 137 11 3 chr5 79635346 79635630 -123449902 + AluJb SINE Alu 1 286 -26 645 157 0 0 chr5 79635630 79635745 -123449787 + GA-rich Low_complexity Low_complexity 1 115 0 1489 150 8 0 chr5 79637977 79638224 -123447308 + L1MA8 LINE L1 6041 6289 -2 373 293 187 0 chr5 79638950 79639073 -123446459 + L2 LINE L2 3115 3260 -12 210 346 13 0 chr5 79639076 79639154 -123446378 + GA-rich Low_complexity Low_complexity 1 79 0 15076 180 29 15 chr5 79639577 79639912 -123445620 - L1MA4A LINE L1 -193 6812 6483 9821 103 6 1 chr5 79639912 79642035 -123443497 - L1PA8 LINE L1 -6 6166 4033 15076 180 29 15 chr5 79642035 79642336 -123443196 - L1MA4A LINE L1 -522 6483 6188 2329 100 0 10 chr5 79642336 79642646 -123442886 - AluY SINE Alu -4 307 1 15076 180 29 15 chr5 79642646 79642718 -123442814 - L1MA4A LINE L1 -817 6188 6118 2170 121 3 0 chr5 79642718 79643016 -123442516 - AluSx SINE Alu -8 304 6 15076 180 29 15 chr5 79643016 79645145 -123440387 - L1MA4A LINE L1 -887 6118 3905 2253 104 3 0 chr5 79645145 79645443 -123440089 - AluY SINE Alu -5 306 8 15076 180 29 15 chr5 79645443 79646493 -123439039 - L1MA4A LINE L1 -3100 3905 2871 3221 284 20 83 chr5 79646495 79647858 -123437674 - L1MA4A LINE L1 -5572 1277 1 1557 191 33 0 chr5 79647861 79648164 -123437368 + L1MC1 LINE L1 6015 6327 -6 388 262 147 39 chr5 79648189 79648427 -123437105 + L1MEd LINE L1 941 1152 -4977 1852 132 83 3 chr5 79648427 79648716 -123436816 + AluSx SINE Alu 1 312 0 388 262 147 39 chr5 79648716 79649168 -123436364 + L1MEd LINE L1 1152 1648 -4481 552 144 165 0 chr5 79649178 79649275 -123436257 + MER44D DNA MER2_type 1 383 -226 373 149 0 45 chr5 79649284 79649351 -123436181 - L1MC2 LINE L1 -262 6082 6019 877 220 21 5 chr5 79649355 79649546 -123435986 + L1M2 LINE L1 2 195 -6654 991 103 0 48 chr5 79649549 79649714 -123435818 + MER44D DNA MER2_type 480 636 -69 341 291 102 0 chr5 79649799 79649926 -123435606 - MER117 DNA MER1_type -51 146 7 236 341 15 30 chr5 79649950 79650085 -123435447 - LTR16C LTR ERVL -1 490 358 2384 78 0 25 chr5 79650703 79651022 -123434510 + AluSp SINE Alu 1 311 -2 26 82 0 0 chr5 79651042 79651103 -123434429 + AT_rich Low_complexity Low_complexity 1 61 0 226 340 100 0 chr5 79651279 79651429 -123434103 + L1ME LINE L1 5421 5585 -2223 1405 192 85 61 chr5 79651438 79651813 -123433719 + MLT1B LTR MaLR 7 390 0 314 196 12 51 chr5 79651815 79651897 -123433635 + L1ME LINE L1 5588 5667 -454 358 313 102 18 chr5 79652084 79652250 -123433282 + MIR SINE MIR 6 185 -77 599 265 28 28 chr5 79652289 79652470 -123433062 + MIR3 SINE MIR 8 188 -20 247 237 3 15 chr5 79654311 79654389 -123431143 + MIR SINE MIR 84 145 -63 370 143 0 0 chr5 79654593 79654649 -123430883 + L1MC5 LINE L1 7720 7775 -186 381 266 35 65 chr5 79654910 79655079 -123430453 + L2 LINE L2 3114 3277 -36 300 53 0 0 chr5 79655090 79655128 -123430404 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 318 239 257 9 chr5 79655348 79655461 -123430071 - MIR3 SINE MIR -52 156 16 619 273 148 0 chr5 79655828 79656044 -123429488 - MIR SINE MIR 0 262 15 277 277 84 8 chr5 79656146 79656265 -123429267 - MLT1J LTR MaLR -174 337 210 283 267 58 25 chr5 79656281 79656401 -123429131 - L1MC4 LINE L1 0 8042 7919 411 253 62 18 chr5 79656611 79656749 -123428783 + MIR SINE MIR 5 143 -65 314 267 152 38 chr5 79656772 79656877 -123428655 - MER5A DNA MER1_type -72 117 1 216 67 0 0 chr5 79658173 79658203 -123427329 + (CA)n Simple_repeat Simple_repeat 2 31 0 635 193 161 19 chr5 79659201 79659362 -123426170 - MER5A DNA MER1_type 0 189 6 599 304 65 16 chr5 79660297 79660544 -123424988 - MIR SINE MIR 0 262 4 427 288 38 8 chr5 79660643 79660775 -123424757 - MER117 DNA MER1_type -61 136 1 1172 161 29 10 chr5 79661018 79661223 -123424309 + L1PA16 LINE L1 5958 6166 0 345 272 80 43 chr5 79661293 79661455 -123424077 + L1M4 LINE L1 5044 5211 -935 1132 147 16 31 chr5 79662015 79662206 -123423326 - MER20 DNA MER1_type -31 188 1 425 287 85 77 chr5 79662676 79663075 -123422457 - MLT1H LTR MaLR -13 536 13 2063 148 3 0 chr5 79663134 79663439 -123422093 + AluJb SINE Alu 1 306 -6 3300 227 13 37 chr5 79664978 79665985 -123419547 - L1ME1 LINE L1 -7 6228 5252 10890 39 5 0 chr5 79665985 79668060 -123417472 - L1PA5 LINE L1 0 6154 4071 3300 227 13 37 chr5 79668060 79668165 -123417367 - L1ME1 LINE L1 -983 5252 5146 1894 163 3 3 chr5 79668169 79668458 -123417074 + AluSx SINE Alu 2 290 -22 428 117 13 0 chr5 79668458 79668535 -123416997 + (GGGAA)n Simple_repeat Simple_repeat 1 78 0 2156 197 41 19 chr5 79668580 79669052 -123416480 + LTR45B LTR ERV1 11 619 0 4391 212 72 18 chr5 79669053 79670296 -123415236 - L1ME1 LINE L1 -1106 5109 3799 1442 212 49 45 chr5 79670301 79670399 -123415133 - MER76 LTR ERV 0 688 592 1589 104 36 0 chr5 79670399 79670620 -123414912 - MER30 DNA MER1_type 0 230 2 1442 212 49 45 chr5 79670620 79671139 -123414393 - MER76 LTR ERV -96 592 4 2463 255 41 14 chr5 79671144 79672564 -123412968 - L1ME1 LINE L1 -2446 3769 840 2828 249 31 9 chr5 79672578 79673256 -123412276 - L1ME1 LINE L1 -5668 728 36 7015 188 174 24 chr5 79673685 79675210 -123410322 - MER52A LTR ERV1 0 1755 1 381 334 173 6 chr5 79675210 79675533 -123409999 - L2 LINE L2 -32 3281 2905 552 141 0 0 chr5 79675764 79675856 -123409676 + AluSp/q SINE Alu 218 309 -4 296 284 55 70 chr5 79676536 79676737 -123408795 + MIR SINE MIR 23 220 -42 306 272 0 61 chr5 79676918 79677032 -123408500 + MIR SINE MIR 76 182 -80 209 307 159 6 chr5 79678311 79678474 -123407058 + L3b LINE CR1 1321 1508 -75 2041 192 9 68 chr5 79678927 79679473 -123406059 + MLT2B2 LTR ERVL 1 515 -38 326 241 9 65 chr5 79679728 79679836 -123405696 + MER113 DNA MER1_type? 5 106 -415 21 57 0 0 chr5 79679928 79679963 -123405569 + AT_rich Low_complexity Low_complexity 1 35 0 283 286 66 0 chr5 79680259 79680350 -123405182 + MIR SINE MIR 151 247 -15 456 286 42 42 chr5 79681837 79682050 -123403482 + MIR SINE MIR 7 219 -43 229 301 36 0 chr5 79682132 79682215 -123403317 - L2 LINE L2 0 3272 3187 858 81 8 32 chr5 79682888 79683012 -123402520 - AluSp SINE Alu -175 138 18 1316 97 0 0 chr5 79683012 79683187 -123402345 + AluSp SINE Alu 136 310 -3 193 302 0 16 chr5 79684758 79684821 -123400711 + MIR SINE MIR 23 84 -124 684 244 120 30 chr5 79684907 79685145 -123400387 + MIR SINE MIR 4 260 -2 2262 83 0 13 chr5 79685473 79685649 -123399883 - AluY SINE Alu -14 297 125 189 0 0 0 chr5 79685649 79685670 -123399862 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2262 83 0 13 chr5 79685670 79685794 -123399738 - AluY SINE Alu -186 125 1 254 364 0 0 chr5 79685964 79686063 -123399469 + MIR SINE MIR 3 101 -161 393 22 0 0 chr5 79686375 79686421 -123399111 + (TC)n Simple_repeat Simple_repeat 1 46 0 406 301 34 34 chr5 79687550 79687696 -123397836 + L2 LINE L2 3118 3263 -9 222 149 0 75 chr5 79687696 79687763 -123397769 + (GAGAA)n Simple_repeat Simple_repeat 4 65 0 2140 115 0 0 chr5 79687774 79688062 -123397470 + AluSx SINE Alu 23 310 -2 2271 158 89 20 chr5 79688388 79688837 -123396695 + MLT1D LTR MaLR 25 504 -1 1758 197 0 0 chr5 79690545 79690845 -123394687 - AluJb SINE Alu -12 300 1 2260 114 7 0 chr5 79691906 79692204 -123393328 + AluSp SINE Alu 1 300 -13 198 91 0 0 chr5 79692531 79692564 -123392968 + (A)n Simple_repeat Simple_repeat 1 33 0 37800 69 13 3 chr5 79693232 79698184 -123387348 + L1P LINE L1 3 5006 -1140 3867 189 21 15 chr5 79698390 79699437 -123386095 + L1M1 LINE L1 3320 4377 -3188 288 188 14 29 chr5 79701378 79701447 -123384085 + LTR33 LTR ERVL 106 173 -348 293 256 37 112 chr5 79701538 79701673 -123383859 + LTR33 LTR ERVL 323 438 -83 995 155 0 46 chr5 79701673 79701847 -123383685 - FRAM SINE Alu 0 166 1 293 256 37 112 chr5 79701847 79701926 -123383606 + LTR33 LTR ERVL 438 521 0 480 287 26 43 chr5 79702887 79703117 -123382415 + MIR SINE MIR 21 246 -16 514 289 46 5 chr5 79703420 79703617 -123381915 - L1ME4a LINE L1 -218 5903 5699 952 139 12 6 chr5 79703860 79704025 -123381507 - MER5A DNA MER1_type -23 166 1 318 26 0 0 chr5 79704108 79704147 -123381385 + (CA)n Simple_repeat Simple_repeat 2 40 0 844 201 171 11 chr5 79704534 79704733 -123380799 + MER33 DNA MER1_type 2 254 -2331 2273 98 34 0 chr5 79704733 79705030 -123380502 - AluSg SINE Alu -3 307 1 844 201 171 11 chr5 79705030 79705093 -123380439 + MER33 DNA MER1_type 254 306 -18 216 122 0 0 chr5 79705168 79705209 -123380323 + (TG)n Simple_repeat Simple_repeat 1 41 0 2252 100 3 0 chr5 79705758 79706047 -123379485 - AluSg1 SINE Alu -15 294 5 25 31 0 0 chr5 79706283 79706315 -123379217 + AT_rich Low_complexity Low_complexity 1 32 0 1368 166 38 64 chr5 79706315 79706580 -123378952 - AluJo SINE Alu -54 258 1 825 139 12 94 chr5 79706636 79706880 -123378652 - L1MB3 LINE L1 -2 6181 5958 1662 106 106 11 chr5 79707105 79707379 -123378153 + AluSq SINE Alu 1 300 -13 1214 94 0 6 chr5 79707395 79707575 -123377957 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 604 204 41 27 chr5 79707683 79707830 -123377702 - MER104 DNA Tc2 -2 178 30 360 140 0 0 chr5 79708061 79708118 -123377414 + AluJ/FLAM SINE Alu 1 57 -245 415 331 98 45 chr5 79708299 79708893 -123376639 - L2 LINE L2 0 3313 2648 387 0 0 0 chr5 79708893 79708936 -123376596 + (TG)n Simple_repeat Simple_repeat 2 44 0 415 331 98 45 chr5 79708936 79709243 -123376289 - L2 LINE L2 -665 2648 2359 1559 107 9 9 chr5 79709354 79709578 -123375954 + AluSg/x SINE Alu 83 306 -4 241 300 17 33 chr5 79709856 79709976 -123375556 + L2 LINE L2 2978 3095 -177 347 179 90 60 chr5 79710529 79710663 -123374869 + L1ME4a LINE L1 5962 6099 -22 1016 153 11 17 chr5 79710665 79710842 -123374690 - AluJb SINE Alu -6 306 131 2471 46 10 7 chr5 79711184 79711486 -123374046 + AluY SINE Alu 4 306 -5 275 154 39 51 chr5 79711574 79711652 -123373880 + MIR SINE MIR 44 120 -88 252 345 21 35 chr5 79711754 79711899 -123373633 + MIR SINE MIR 3 145 -63 781 158 7 46 chr5 79712481 79712633 -123372899 - Tigger2a DNA MER2_type -288 146 1 274 314 12 12 chr5 79713092 79713178 -123372354 + L2 LINE L2 3187 3272 0 570 251 35 91 chr5 79713261 79713308 -123372224 - L1ME LINE L1 -299 5822 5774 2081 113 65 0 chr5 79713308 79713600 -123371932 - AluSx SINE Alu -1 311 1 570 251 35 91 chr5 79713600 79713839 -123371693 - L1ME LINE L1 -347 5774 5552 255 170 0 0 chr5 79713961 79714008 -123371524 + (TG)n Simple_repeat Simple_repeat 2 48 0 1050 280 75 14 chr5 79714628 79715157 -123370375 - L2 LINE L2 -4 3309 2755 1659 107 6 110 chr5 79715871 79716207 -123369325 - AluSx SINE Alu -1 301 1 389 221 271 0 chr5 79716623 79716745 -123368787 + HAL1 LINE L1 537 691 -1816 300 269 127 22 chr5 79716757 79716891 -123368641 + HAL1 LINE L1 744 891 -1616 2108 111 7 7 chr5 79716997 79717304 -123368228 + AluSx SINE Alu 1 307 -5 204 250 143 45 chr5 79717386 79717409 -123368123 + MIR SINE MIR 80 99 -163 370 173 67 0 chr5 79717409 79717484 -123368048 + MER116 DNA Mariner 1 80 0 204 250 143 45 chr5 79717484 79717572 -123367960 + MIR SINE MIR 99 202 -60 228 242 11 21 chr5 79717726 79717821 -123367711 - HAL1 LINE L1 -1414 1093 1000 922 113 0 60 chr5 79718121 79718272 -123367260 - AluJo SINE Alu -170 142 1 409 352 11 17 chr5 79719322 79719501 -123366031 - MIR SINE MIR -10 252 75 246 356 27 40 chr5 79719996 79720145 -123365387 + MIR SINE MIR 25 171 -91 689 254 81 30 chr5 79720313 79720549 -123364983 + MIR SINE MIR 13 260 -2 231 83 56 0 chr5 79720723 79720759 -123364773 - Alu SINE Alu -262 38 1 226 135 77 39 chr5 79720726 79720778 -123364754 - AluSg/x SINE Alu -132 170 117 * 647 260 24 12 chr5 79721521 79721690 -123363842 + MIR SINE MIR 35 205 -57 290 286 83 30 chr5 79722102 79722235 -123363297 - L2 LINE L2 -15 3298 3159 2280 180 84 2 chr5 79722302 79722768 -123362764 + L1MB3 LINE L1 5680 6183 0 2089 99 3 3 chr5 79722772 79723064 -123362468 - AluSg SINE Alu -18 292 1 214 317 28 35 chr5 79723180 79723325 -123362207 - L2 LINE L2 -454 2860 2717 1531 74 10 0 chr5 79723425 79723627 -123361905 + AluY SINE Alu 108 311 0 306 73 0 0 chr5 79723659 79723700 -123361832 - MADE1 DNA Mariner -39 41 1 * 1301 218 45 8 chr5 79723700 79724006 -123361526 - MLT1A1 LTR MaLR -43 347 2 378 0 0 0 chr5 79725850 79725892 -123359640 + (TG)n Simple_repeat Simple_repeat 1 42 0 796 115 0 9 chr5 79726202 79726315 -123359217 + FLAM_A SINE Alu 13 124 -18 274 313 36 0 chr5 79727079 79727162 -123358370 + MER5A DNA MER1_type 96 181 -8 25 0 0 0 chr5 79728216 79728241 -123357291 + AT_rich Low_complexity Low_complexity 1 25 0 256 314 105 9 chr5 79728574 79728679 -123356853 + MER91C DNA MER1_type 26 140 0 194 384 0 0 chr5 79729064 79729137 -123356395 + L2 LINE L2 2694 2766 -548 681 259 23 36 chr5 79729140 79729412 -123356120 + MER113 DNA MER1_type? 3 348 -173 1659 153 3 30 chr5 79729412 79729712 -123355820 - AluJb SINE Alu -10 302 11 681 259 23 36 chr5 79729712 79729884 -123355648 + MER113 DNA MER1_type? 348 521 0 269 205 71 45 chr5 79730380 79730492 -123355040 - MLT1L LTR MaLR -500 115 1 375 240 74 25 chr5 79730662 79730783 -123354749 + L2 LINE L2 3146 3272 0 198 0 0 0 chr5 79731212 79731234 -123354298 + (CA)n Simple_repeat Simple_repeat 1 22 0 1931 151 0 0 chr5 79731501 79731800 -123353732 - AluSx SINE Alu -13 299 1 242 212 0 30 chr5 79732497 79732563 -123352969 + (TG)n Simple_repeat Simple_repeat 1 64 0 718 91 0 10 chr5 79732616 79732715 -123352817 + AluS SINE Alu 3 100 -213 1672 78 0 0 chr5 79733167 79733384 -123352148 - AluSc SINE Alu -7 302 86 326 333 64 13 chr5 79733494 79733650 -123351882 + MIR SINE MIR 27 190 -72 205 339 34 0 chr5 79733952 79734011 -123351521 - MIR SINE MIR 0 262 202 470 260 120 31 chr5 79735627 79735819 -123349713 + MIR SINE MIR 2 210 -52 376 258 69 50 chr5 79736398 79736557 -123348975 - MIR SINE MIR -95 167 6 198 237 17 34 chr5 79737074 79737133 -123348399 - L2 LINE L2 -5 3308 3251 198 268 198 0 chr5 79737199 79737356 -123348176 - L2 LINE L2 -195 3077 2890 217 158 26 0 chr5 79737843 79737881 -123347651 + MIR SINE MIR 95 133 -75 214 196 0 36 chr5 79738039 79738095 -123347437 + (CTCA)n Simple_repeat Simple_repeat 1 54 0 367 325 7 53 chr5 79738702 79738853 -123346679 + MIR3 SINE MIR 64 207 -1 941 273 88 42 chr5 79739122 79739577 -123345955 - MLT1H LTR MaLR -1 548 73 365 241 93 9 chr5 79740188 79740296 -123345236 - MIR SINE MIR -108 154 38 365 237 21 21 chr5 79740418 79740511 -123345021 + MER5A DNA MER1_type 12 104 -85 508 296 90 40 chr5 79740567 79740790 -123344742 + MIR SINE MIR 18 251 -11 213 196 0 0 chr5 79740881 79740927 -123344605 + (CA)n Simple_repeat Simple_repeat 2 47 0 372 232 164 40 chr5 79741489 79741666 -123343866 - MIR SINE MIR 0 262 64 216 135 0 0 chr5 79742585 79742622 -123342910 + (CA)n Simple_repeat Simple_repeat 1 37 0 1996 87 13 26 chr5 79742845 79743155 -123342377 + L1MA5A LINE L1 5992 6297 0 344 286 71 16 chr5 79743175 79743357 -123342175 + MLT1J LTR MaLR 320 511 0 660 262 46 46 chr5 79743380 79743617 -123341915 + L2 LINE L2 3077 3313 0 242 315 54 11 chr5 79743785 79743877 -123341655 - L2 LINE L2 -19 3294 3199 39 0 0 0 chr5 79744122 79744161 -123341371 + AT_rich Low_complexity Low_complexity 1 39 0 30 27 0 0 chr5 79746136 79746173 -123339359 + AT_rich Low_complexity Low_complexity 1 37 0 185 154 26 0 chr5 79746844 79746883 -123338649 + CT-rich Low_complexity Low_complexity 3 42 0 246 128 0 0 chr5 79746883 79746922 -123338610 + (CCG)n Simple_repeat Simple_repeat 2 40 0 190 281 22 56 chr5 79747118 79747207 -123338325 + MIR SINE MIR 147 232 -30 322 338 12 25 chr5 79747514 79747674 -123337858 - L2 LINE L2 -244 3028 2871 227 269 0 0 chr5 79747920 79747972 -123337560 + MLT1L LTR MaLR 343 394 -221 334 258 11 34 chr5 79748237 79748326 -123337206 - MIR SINE MIR -121 141 55 186 320 133 13 chr5 79749677 79749752 -123335780 + L2 LINE L2 3179 3262 -10 287 315 185 22 chr5 79750658 79750842 -123334690 + MIR SINE MIR 21 234 -28 896 236 83 91 chr5 79751017 79751499 -123334033 - MLT1J LTR MaLR 0 511 34 618 183 8 17 chr5 79752124 79752244 -123333288 - MLT1F LTR MaLR 0 542 424 408 20 0 0 chr5 79752402 79752451 -123333081 + (CA)n Simple_repeat Simple_repeat 1 49 0 283 220 93 67 chr5 79753121 79753271 -123332261 - L1ME4a LINE L1 0 6121 5968 790 274 57 38 chr5 79753627 79753996 -123331536 - L1ME4a LINE L1 -203 5918 5543 259 314 156 25 chr5 79754280 79754595 -123330937 - L1MC4a LINE L1 -1878 5930 5575 347 148 0 0 chr5 79754728 79754789 -123330743 + AluSc SINE Alu 239 299 0 543 320 98 0 chr5 79754793 79754987 -123330545 + MIR SINE MIR 28 240 -22 247 269 0 0 chr5 79755037 79755104 -123330428 + MLT1L LTR MaLR 1 67 -548 434 261 58 106 chr5 79755173 79755253 -123330279 + MLT1L LTR MaLR 202 284 -331 1085 161 199 48 chr5 79755253 79755625 -123329907 - MSTC LTR MaLR 0 428 1 434 261 58 106 chr5 79755625 79755770 -123329762 + MLT1L LTR MaLR 284 416 -199 284 368 35 0 chr5 79756365 79756479 -123329053 + L2 LINE L2 3155 3272 0 287 358 45 34 chr5 79756552 79756731 -123328801 + MIR SINE MIR 4 184 -78 5845 110 9 10 chr5 79756940 79758819 -123326713 - L1PA16 LINE L1 0 6166 4281 315 290 237 18 chr5 79758820 79758989 -123326543 + HAL1 LINE L1 139 344 -2163 2812 128 12 16 chr5 79759016 79759446 -123326086 - MSTA LTR MaLR 0 428 1 294 169 0 0 chr5 79759475 79759540 -123325992 + (CCA)n Simple_repeat Simple_repeat 1 65 0 184 184 26 0 chr5 79759690 79759728 -123325804 + L2 LINE L2 2933 2971 -342 701 261 5 27 chr5 79760293 79760477 -123325055 + MIR SINE MIR 13 192 -70 1145 201 42 0 chr5 79760830 79761044 -123324488 + MER58A DNA MER1_type 1 223 -1 283 303 172 7 chr5 79761521 79761666 -123323866 + L2 LINE L2 2684 2852 -462 254 392 29 23 chr5 79761744 79761915 -123323617 + L2 LINE L2 2926 3097 -175 256 231 46 28 chr5 79762166 79762274 -123323258 + MER113 DNA MER1_type? 90 199 -322 708 318 37 12 chr5 79762412 79762654 -123322878 + MIR SINE MIR 15 262 0 243 244 0 85 chr5 79762711 79762793 -123322739 - L2 LINE L2 -4 3268 3194 806 280 45 26 chr5 79763191 79763455 -123322077 + Charlie8 DNA MER1_type 2 270 -2147 1807 262 102 64 chr5 79763470 79764014 -123321518 + MER115 DNA AcHobo 14 588 -105 2185 92 7 0 chr5 79764014 79764306 -123321226 + AluSp SINE Alu 1 294 -19 1807 262 102 64 chr5 79764306 79764406 -123321126 + MER115 DNA AcHobo 588 683 -10 298 376 11 0 chr5 79764478 79764571 -123320961 + L2 LINE L2 3136 3229 -43 1152 133 12 6 chr5 79764728 79764894 -123320638 + AluJo SINE Alu 1 167 -145 2269 108 3 0 chr5 79765397 79765693 -123319839 + AluSp SINE Alu 1 297 -16 444 230 177 14 chr5 79766348 79766557 -123318975 + MLT1L LTR MaLR 370 612 -3 1327 169 53 60 chr5 79766751 79767035 -123318497 - AluJb SINE Alu -19 293 12 187 375 91 15 chr5 79767126 79767467 -123318065 + L2 LINE L2 2488 2854 -460 1970 133 22 0 chr5 79767781 79768059 -123317473 - AluSx SINE Alu -1 311 28 286 273 15 0 chr5 79768102 79768168 -123317364 + L2 LINE L2 3203 3269 -3 1016 161 32 0 chr5 79768391 79768546 -123316986 - AluJo SINE Alu -30 282 123 910 278 93 14 chr5 79768700 79769056 -123316476 + L2 LINE L2 2930 3313 0 2114 119 0 42 chr5 79769216 79769528 -123316004 + AluSc SINE Alu 1 299 -10 1836 142 7 24 chr5 79770202 79770531 -123315001 + AluSx SINE Alu 2 325 0 889 308 81 3 chr5 79770571 79770905 -123314627 + MER115 DNA AcHobo 7 366 -327 253 275 101 0 chr5 79770960 79771029 -123314503 + MER115 DNA AcHobo 469 544 -149 181 370 14 22 chr5 79771642 79771780 -123313752 + L2 LINE L2 2677 2813 -501 220 369 102 34 chr5 79771837 79772043 -123313489 + L2 LINE L2 2963 3182 -90 415 282 34 43 chr5 79772839 79772956 -123312576 + L2 LINE L2 3157 3272 0 540 272 110 7 chr5 79773020 79773214 -123312318 + MIR SINE MIR 2 211 -51 1861 111 99 40 chr5 79773231 79773583 -123311949 - THE1C LTR MaLR -2 373 1 1900 94 3 52 chr5 79774590 79774897 -123310635 - Tigger2a DNA MER2_type -142 292 1 22 0 0 0 chr5 79774913 79774935 -123310597 + AT_rich Low_complexity Low_complexity 1 22 0 2034 135 3 16 chr5 79774935 79775239 -123310293 + AluSx SINE Alu 2 301 -11 472 107 36 12 chr5 79775240 79775324 -123310208 - Charlie5 DNA MER1_type -112 2500 2415 779 207 51 6 chr5 79775351 79775376 -123310156 - L1MB7 LINE L1 0 6166 6144 1936 141 13 23 chr5 79775376 79775513 -123310019 + AluSx SINE Alu 1 138 -174 2382 82 3 0 chr5 79775513 79775805 -123309727 + AluSp SINE Alu 1 293 -20 1936 141 13 23 chr5 79775805 79775972 -123309560 + AluSx SINE Alu 138 302 -10 779 207 51 6 chr5 79775972 79776143 -123309389 - L1MB7 LINE L1 -22 6144 5965 547 238 15 0 chr5 79776143 79776282 -123309250 - MER33 DNA MER1_type -250 74 1 226 290 0 0 chr5 79777330 79777392 -123308140 - MLT1L LTR MaLR -3 612 551 1421 175 0 41 chr5 79777413 79777659 -123307873 + AluJo SINE Alu 2 237 -75 386 319 115 13 chr5 79777902 79778059 -123307473 + MIR3 SINE MIR 8 180 -28 744 249 158 78 chr5 79778238 79778297 -123307235 - MLT1K LTR MaLR -2 586 533 2190 117 0 25 chr5 79778297 79778613 -123306919 + AluSg SINE Alu 3 310 0 744 249 158 78 chr5 79778613 79779090 -123306442 - MLT1K LTR MaLR -55 533 7 190 288 128 82 chr5 79779734 79780172 -123305360 - L2 LINE L2 -2 3270 2813 2082 274 75 31 chr5 79780608 79781377 -123304155 - L2 LINE L2 -592 2722 1920 268 327 82 0 chr5 79781509 79781619 -123303913 - MIR SINE MIR -10 252 134 2431 130 32 114 chr5 79781674 79782246 -123303286 - L1MB2 LINE L1 -1 6170 5645 1706 153 43 55 chr5 79782246 79782456 -123303076 - MER2 DNA MER2_type 0 344 138 1989 125 19 48 chr5 79782456 79782768 -123302764 + AluSx SINE Alu 1 303 -9 1706 153 43 55 chr5 79782768 79782904 -123302628 - MER2 DNA MER2_type -206 138 2 2431 130 32 114 chr5 79782904 79782916 -123302616 - L1MB2 LINE L1 -526 5645 5634 1834 172 3 3 chr5 79782921 79783224 -123302308 - AluJo SINE Alu -9 303 1 638 358 29 12 chr5 79783603 79783849 -123301683 - MIR SINE MIR -1 261 12 2163 108 6 16 chr5 79784209 79784523 -123301009 - AluSx SINE Alu -1 311 1 654 25 0 0 chr5 79784910 79784990 -123300542 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 1691 178 0 4 chr5 79784990 79785266 -123300266 - AluJo SINE Alu -32 280 6 368 226 137 24 chr5 79785335 79785459 -123300073 - L2 LINE L2 -38 3275 3138 431 154 51 3 chr5 79785986 79786124 -123299408 + MER53 DNA DNA 2 189 0 256 187 200 0 chr5 79786131 79786206 -123299326 - MIR SINE MIR -87 175 86 23 0 0 0 chr5 79786754 79786777 -123298755 + AT_rich Low_complexity Low_complexity 1 23 0 361 259 109 34 chr5 79786823 79786970 -123298562 + MIR SINE MIR 73 230 -32 2017 147 3 3 chr5 79787328 79787635 -123297897 - AluSx SINE Alu -5 307 1 603 346 48 4 chr5 79787643 79787874 -123297658 - MIR SINE MIR -13 249 9 448 288 152 11 chr5 79788878 79789069 -123296463 - MIR SINE MIR -13 249 32 276 326 0 12 chr5 79789526 79789612 -123295920 - L2 LINE L2 -8 3305 3221 213 154 0 0 chr5 79790490 79790529 -123295003 + T-rich Low_complexity Low_complexity 1 39 0 635 288 49 16 chr5 79790738 79790981 -123294551 + MIR SINE MIR 12 262 0 191 250 103 0 chr5 79791174 79791242 -123294290 + MIR SINE MIR 131 205 -57 566 231 21 28 chr5 79791259 79791402 -123294130 - MIR SINE MIR -50 212 71 733 260 76 5 chr5 79791987 79792447 -123293085 - LTR33 LTR ERVL -1 520 8 265 314 114 19 chr5 79792873 79792978 -123292554 + L2 LINE L2 3191 3305 -8 490 188 52 27 chr5 79793013 79793165 -123292367 - MIR SINE MIR -5 257 100 289 265 30 91 chr5 79793774 79793817 -123291715 - MIR SINE MIR -78 184 140 2166 118 14 0 chr5 79793817 79794113 -123291419 - AluSx SINE Alu -12 300 1 289 265 30 91 chr5 79794113 79794201 -123291331 - MIR SINE MIR -122 140 61 435 280 42 0 chr5 79794478 79794596 -123290936 - MLT1I LTR MaLR -188 221 99 470 293 0 63 chr5 79794668 79794809 -123290723 - MIR SINE MIR -93 169 39 1293 200 18 0 chr5 79794809 79795029 -123290503 - MER58A DNA MER1_type 0 224 1 470 293 0 63 chr5 79795029 79795061 -123290471 - MIR SINE MIR -223 39 7 25 65 0 0 chr5 79795717 79795763 -123289769 + AT_rich Low_complexity Low_complexity 1 46 0 343 317 29 0 chr5 79795884 79795988 -123289544 + MIR SINE MIR 72 178 -84 327 256 18 89 chr5 79796515 79796683 -123288849 - MIR3 SINE MIR -15 193 38 414 283 0 3 chr5 79796995 79797112 -123288420 + MIR SINE MIR 53 167 -41 387 301 92 20 chr5 79797431 79797584 -123287948 + MER5B DNA MER1_type 1 164 -14 378 179 119 0 chr5 79797769 79797853 -123287679 - MER5A DNA MER1_type -90 99 6 322 353 67 33 chr5 79798023 79798173 -123287359 - L2 LINE L2 -219 3053 2899 297 308 105 15 chr5 79800994 79801127 -123284405 + L2 LINE L2 2566 2710 -604 301 222 25 0 chr5 79801129 79801210 -123284322 + MLT1K LTR MaLR 154 236 -352 362 316 0 0 chr5 79801215 79801332 -123284200 - MIR SINE MIR 0 262 146 195 42 0 0 chr5 79802237 79802261 -123283271 + (T)n Simple_repeat Simple_repeat 1 24 0 850 223 30 0 chr5 79802417 79802583 -123282949 + MER5A DNA MER1_type 13 183 -6 616 296 71 66 chr5 79802661 79803084 -123282448 - MLT1L LTR MaLR -190 425 1 272 252 213 11 chr5 79803084 79803204 -123282328 - MIR SINE MIR -62 146 16 566 303 34 74 chr5 79803334 79803658 -123281874 + MER102a DNA MER1_type 2 312 -18 2384 158 46 10 chr5 79804219 79804467 -123281065 - MSTB LTR MaLR 0 426 156 1654 174 17 7 chr5 79804467 79804755 -123280777 + AluJb SINE Alu 16 306 -6 2384 158 46 10 chr5 79804755 79804917 -123280615 - MSTB LTR MaLR -270 156 1 437 303 207 5 chr5 79805199 79805509 -123280023 - L2 LINE L2 -182 3090 2712 379 318 172 41 chr5 79805587 79805930 -123279602 + L2 LINE L2 2383 2770 -544 916 287 140 17 chr5 79806062 79806533 -123278999 - MLT1G1 LTR MaLR 0 595 15 195 213 93 80 chr5 79806547 79806622 -123278910 + L2 LINE L2 3235 3310 -3 180 77 0 0 chr5 79806622 79806648 -123278884 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1727 121 4 66 chr5 79806656 79806929 -123278603 - AluSq SINE Alu -57 256 1 339 197 25 148 chr5 79807065 79807187 -123278345 + MIR SINE MIR 84 190 -72 185 132 26 0 chr5 79808022 79808060 -123277472 + GA-rich Low_complexity Low_complexity 3 41 0 271 141 35 24 chr5 79808544 79808629 -123276903 + GA-rich Low_complexity Low_complexity 1 86 0 349 252 207 0 chr5 79808738 79808849 -123276683 + L2 LINE L2 3137 3270 -2 239 300 90 0 chr5 79809410 79809510 -123276022 - L2 LINE L2 -18 3254 3146 599 299 101 19 chr5 79809547 79809754 -123275778 - MIR SINE MIR -6 256 33 456 154 123 69 chr5 79809931 79810061 -123275471 + MIR3 SINE MIR 10 146 -62 576 295 34 24 chr5 79810488 79810695 -123274837 - MIR SINE MIR -2 260 52 1949 141 6 52 chr5 79810793 79811119 -123274413 + AluJo SINE Alu 1 311 -1 292 292 109 113 chr5 79811130 79811356 -123274176 - L2 LINE L2 0 3272 3046 2545 70 0 6 chr5 79811356 79811668 -123273864 + AluY SINE Alu 1 310 -1 292 292 109 113 chr5 79811668 79811736 -123273796 - L2 LINE L2 -226 3046 2979 1221 176 19 9 chr5 79811736 79811952 -123273580 - MER20 DNA MER1_type -1 218 1 292 292 109 113 chr5 79811952 79812088 -123273444 - L2 LINE L2 -293 2979 2843 223 261 14 43 chr5 79812127 79812196 -123273336 - L2 LINE L2 -8 3305 3239 436 221 44 35 chr5 79813100 79813213 -123272319 + MER81 DNA DNA 1 114 0 224 170 43 0 chr5 79813317 79813364 -123272168 - L2 LINE L2 0 3272 3224 1870 170 25 22 chr5 79813925 79814289 -123271243 + MLT1A1 LTR MaLR 1 365 0 1307 220 29 68 chr5 79814536 79814991 -123270541 - MER113 DNA MER1_type? -77 444 8 644 232 135 24 chr5 79815435 79815651 -123269881 - MIR SINE MIR -2 260 22 255 128 0 0 chr5 79815757 79815796 -123269736 - L2 LINE L2 -3 3310 3272 248 291 99 64 chr5 79815988 79816129 -123269403 + MIR SINE MIR 47 192 -70 880 145 67 17 chr5 79816359 79816538 -123268994 - Tigger2 DNA MER2_type -11 2707 2520 351 222 71 40 chr5 79816834 79816933 -123268599 - L2 LINE L2 0 3272 3171 906 287 144 21 chr5 79816934 79817356 -123268176 + LTR16C LTR ERVL 6 479 -12 848 159 50 16 chr5 79819125 79819307 -123266225 + MER53 DNA DNA 1 188 -1 196 237 68 0 chr5 79820669 79820728 -123264804 - MIR SINE MIR -80 182 120 2557 96 50 19 chr5 79820785 79821149 -123264383 - THE1C LTR MaLR 0 375 1 2977 122 49 55 chr5 79821204 79821697 -123263835 - LTR2B LTR ERV1 0 490 1 288 229 48 24 chr5 79823756 79823838 -123261694 - LTR33A LTR ERVL -5 518 435 334 194 56 0 chr5 79823838 79823910 -123261622 - LTR16C LTR ERVL 0 491 416 350 233 12 23 chr5 79823913 79823999 -123261533 - MER63 DNA MER1_type -971 90 6 185 291 18 18 chr5 79824200 79824255 -123261277 - L3 LINE CR1 -5 1572 1518 3055 168 47 36 chr5 79824258 79824900 -123260632 - L1MB5 LINE L1 0 6174 5526 392 246 153 0 chr5 79824906 79825024 -123260508 - MIR3 SINE MIR -62 146 11 454 319 93 60 chr5 79825730 79826267 -123259265 - L2 LINE L2 -5 3267 2713 325 171 43 14 chr5 79826658 79826728 -123258804 - MER5A DNA MER1_type -77 112 41 2382 90 3 0 chr5 79827958 79828257 -123257275 + AluSp SINE Alu 6 305 -8 189 0 0 0 chr5 79829151 79829172 -123256360 + (CTG)n Simple_repeat Simple_repeat 1 21 0 213 359 39 0 chr5 79829244 79829347 -123256185 - L3 LINE CR1 -18 1559 1453 711 265 37 102 chr5 79829350 79829412 -123256120 - LTR16B LTR ERVL 0 464 400 2575 80 0 0 chr5 79829412 79829724 -123255808 + AluSx SINE Alu 1 312 0 711 265 37 102 chr5 79829724 79830065 -123255467 - LTR16B LTR ERVL -64 400 87 1958 79 12 0 chr5 79830562 79830816 -123254716 + L1PB2 LINE L1 5893 6149 -2 315 71 0 0 chr5 79831196 79831238 -123254294 + (CA)n Simple_repeat Simple_repeat 2 43 0 865 238 43 30 chr5 79831550 79831785 -123253747 + L1ME2 LINE L1 5839 6076 -88 481 227 109 0 chr5 79831863 79831973 -123253559 - MER63 DNA MER1_type -310 752 5 335 211 13 0 chr5 79831975 79832051 -123253481 + L1ME2 LINE L1 6079 6155 -9 2298 72 3 14 chr5 79832617 79832908 -123252624 + AluSc SINE Alu 1 288 -21 288 302 10 0 chr5 79833119 79833215 -123252317 - L1MC/D LINE L1 -2026 5782 5686 337 200 0 13 chr5 79833215 79833290 -123252242 - MER116 DNA Mariner 0 80 7 475 296 158 12 chr5 79833302 79833549 -123251983 - L1MC/D LINE L1 -2149 5659 5377 268 200 20 0 chr5 79835615 79835665 -123249867 - L2 LINE L2 -2 3311 3261 6545 127 19 20 chr5 79835814 79836942 -123248590 - L1MA8 LINE L1 -4 6287 5166 1997 125 7 7 chr5 79836942 79837237 -123248295 - AluY SINE Alu 0 311 17 6545 127 19 20 chr5 79837237 79837382 -123248150 - L1MA8 LINE L1 -1125 5166 5022 491 302 60 11 chr5 79837505 79837687 -123247845 + MIR SINE MIR 10 200 -62 405 195 10 128 chr5 79837950 79838016 -123247516 + L1ME2 LINE L1 4142 4214 -1932 2098 138 0 13 chr5 79838016 79838328 -123247204 - AluJb SINE Alu -3 309 2 405 195 10 128 chr5 79838328 79838456 -123247076 + L1ME2 LINE L1 4214 4313 -1833 324 0 0 0 chr5 79838470 79838506 -123247026 + (TG)n Simple_repeat Simple_repeat 2 37 0 2991 217 126 16 chr5 79838506 79839990 -123245542 + L1ME2 LINE L1 4511 6162 -2 1599 149 23 50 chr5 79840507 79840809 -123244723 - AluJo SINE Alu -14 298 5 2770 3 0 0 chr5 79843327 79843621 -123241911 - AluYa8 SINE Alu -7 303 10 195 429 10 15 chr5 79843883 79844079 -123241453 + L3 LINE CR1 69 263 -1314 689 286 28 0 chr5 79844705 79844883 -123240649 + MIR SINE MIR 73 255 -7 183 323 130 51 chr5 79844910 79845164 -123240368 + L3 LINE CR1 472 745 -832 217 227 160 0 chr5 79845185 79845260 -123240272 + MIR SINE MIR 71 157 -105 198 0 0 0 chr5 79847177 79847199 -123238333 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1160 201 27 18 chr5 79847340 79847559 -123237973 - MER58A DNA MER1_type 0 224 4 315 344 46 15 chr5 79847704 79847835 -123237697 - MER89-int LTR ERV1 -1458 5343 5209 209 79 53 26 chr5 79848046 79848084 -123237448 + T-rich Low_complexity Low_complexity 2 40 0 2957 125 66 0 chr5 79848228 79848652 -123236880 + MER1A DNA MER1_type 1 452 -77 2391 103 0 0 chr5 79848904 79849206 -123236326 + AluSx SINE Alu 1 302 -10 869 118 42 0 chr5 79849714 79849858 -123235674 - L1MB2 LINE L1 0 6171 6022 2618 167 12 21 chr5 79849858 79850290 -123235242 + MSTC LTR MaLR 1 428 0 901 197 149 9 chr5 79850292 79850520 -123235012 + MSTC-int LTR MaLR 2 261 -1474 570 368 62 46 chr5 79850518 79851080 -123234452 + L1M4 LINE L1 2 597 -4753 * 309 279 88 14 chr5 79851439 79851654 -123233878 + L1M4 LINE L1 1093 1323 -4958 964 182 0 6 chr5 79851800 79851959 -123233573 - AluSx SINE Alu -153 159 2 315 250 40 0 chr5 79851963 79852063 -123233469 + L1M4 LINE L1 5281 5384 -966 11294 39 8 3 chr5 79852068 79854131 -123231401 + L1PA5 LINE L1 4071 6146 -8 12056 188 30 16 chr5 79854673 79857260 -123228272 - L1PA15 LINE L1 -2 6163 3517 1857 177 3 0 chr5 79857260 79857560 -123227972 - AluJo SINE Alu -11 301 1 12056 188 30 16 chr5 79857560 79858524 -123227008 - L1PA15 LINE L1 -2648 3517 2568 615 284 58 19 chr5 79859220 79859481 -123226051 - L1ME3A LINE L1 -205 5965 5695 595 274 39 7 chr5 79859556 79859709 -123225823 - MIR SINE MIR -58 204 47 470 273 87 27 chr5 79859740 79859923 -123225609 - L1ME3A LINE L1 -464 5706 5513 518 197 116 61 chr5 79860279 79860426 -123225106 + MER58C DNA MER1_type 61 215 0 30 0 0 0 chr5 79860793 79860823 -123224709 + AT_rich Low_complexity Low_complexity 1 30 0 2168 163 19 5 chr5 79860823 79861197 -123224335 - L1MB3 LINE L1 -12 6171 5793 1385 144 69 16 chr5 79861302 79861617 -123223915 - L1MB3 LINE L1 -652 5528 5171 967 135 0 0 chr5 79861617 79861750 -123223782 - FLAM_C SINE Alu 0 133 1 1385 144 69 16 chr5 79861750 79861831 -123223701 - L1MB3 LINE L1 -1009 5171 5096 1840 225 103 4 chr5 79862090 79862547 -123222985 + MLT1J LTR MaLR 2 503 -8 490 277 67 67 chr5 79863323 79863519 -123222013 - MIR SINE MIR -8 254 56 2159 94 10 7 chr5 79863519 79863817 -123221715 + AluSx SINE Alu 1 299 -13 490 277 67 67 chr5 79863817 79863873 -123221659 - MIR SINE MIR -205 57 2 503 328 167 20 chr5 79863916 79864489 -123221043 - L2 LINE L2 -190 3082 2424 2457 231 40 31 chr5 79865095 79865876 -123219656 + L1M4 LINE L1 2559 3352 -2794 2179 118 15 51 chr5 79865876 79866265 -123219267 - THE1C LTR MaLR 0 375 1 2457 231 40 31 chr5 79866265 79866421 -123219111 + L1M4 LINE L1 3352 3505 -2641 3641 159 65 65 chr5 79866437 79867242 -123218290 + L1MCa LINE L1 20 824 -5602 1007 105 0 62 chr5 79867308 79867470 -123218062 - AluSg/x SINE Alu -5 305 154 * 1428 138 5 5 chr5 79867469 79867679 -123217853 - AluSx SINE Alu -102 210 1 397 264 73 39 chr5 79867691 79867869 -123217663 + L1M4 LINE L1 4037 4220 -1926 3855 138 71 13 chr5 79867874 79868923 -123216609 + L1MCa LINE L1 811 1999 -4427 3483 162 58 44 chr5 79868923 79869005 -123216527 + MER44D DNA MER2_type 1 80 -2407 2011 120 3 14 chr5 79869005 79869296 -123216236 + AluSx SINE Alu 1 288 -24 657 0 0 0 chr5 79869300 79869373 -123216159 + (CAATA)n Simple_repeat Simple_repeat 4 76 0 3483 162 58 44 chr5 79869373 79869512 -123216020 + MER44D DNA MER2_type 82 218 -2269 2091 119 18 21 chr5 79869512 79869849 -123215683 - MER1B DNA MER1_type -1 336 1 3483 162 58 44 chr5 79869849 79870344 -123215188 + MER44D DNA MER2_type 218 605 0 1982 190 46 17 chr5 79870344 79871166 -123214366 + L1MCa LINE L1 2039 2896 -3530 3686 128 32 42 chr5 79871198 79871861 -123213671 + L1MC1 LINE L1 5677 6332 -1 270 193 0 0 chr5 79871863 79871920 -123213612 + GA-rich Low_complexity Low_complexity 3 59 0 486 232 22 14 chr5 79871936 79872135 -123213397 + L1MCa LINE L1 3807 4103 -2323 511 136 12 0 chr5 79872160 79872241 -123213291 - AluJo SINE Alu -11 301 220 839 138 22 14 chr5 79872241 79872379 -123213153 - AluJo SINE Alu -163 149 11 1602 222 16 21 chr5 79873384 79873772 -123211760 + MLT1F LTR MaLR 1 386 -156 2772 168 41 0 chr5 79875264 79875752 -123209780 + MLT2B3 LTR ERVL 1 508 -46 1343 233 38 12 chr5 79876113 79876456 -123209076 + MLT1F LTR MaLR 128 479 -63 508 250 98 12 chr5 79876547 79876711 -123208821 + MIR SINE MIR 70 247 -15 678 151 59 19 chr5 79876714 79876883 -123208649 + MER104 DNA Tc2 1 176 -4 23 0 0 0 chr5 79877139 79877162 -123208370 + AT_rich Low_complexity Low_complexity 1 23 0 1737 117 139 0 chr5 79877176 79877442 -123208090 + AluSq SINE Alu 3 305 -8 1828 196 79 17 chr5 79877462 79877942 -123207590 - MLT2B1 LTR ERVL -7 513 4 661 148 20 0 chr5 79878103 79878204 -123207328 + FLAM_C SINE Alu 20 122 -21 339 25 0 0 chr5 79878204 79878244 -123207288 + (TA)n Simple_repeat Simple_repeat 2 41 0 1906 145 35 0 chr5 79878266 79878556 -123206976 + AluSx SINE Alu 1 300 -12 221 281 12 12 chr5 79878633 79878715 -123206817 + (TCTG)n Simple_repeat Simple_repeat 2 83 0 21 0 0 0 chr5 79879251 79879272 -123206260 + AT_rich Low_complexity Low_complexity 1 21 0 45 62 0 0 chr5 79879366 79879446 -123206086 + AT_rich Low_complexity Low_complexity 1 80 0 1061 225 159 4 chr5 79879554 79879812 -123205720 + AluJb SINE Alu 1 298 -4 2061 218 67 57 chr5 79879894 79880811 -123204721 + L1MC5 LINE L1 6448 7397 -564 1792 190 31 11 chr5 79880811 79881169 -123204363 - MLT1A1 LTR MaLR 0 365 1 2061 218 67 57 chr5 79881169 79881259 -123204273 + L1MC5 LINE L1 7397 7485 -476 246 174 0 0 chr5 79881272 79881318 -123204214 + (TA)n Simple_repeat Simple_repeat 2 47 0 1803 169 0 28 chr5 79881361 79881681 -123203851 - AluJb SINE Alu -1 311 1 728 237 129 37 chr5 79881687 79882067 -123203465 + L1MC5 LINE L1 7499 7913 -48 1390 207 14 120 chr5 79882617 79883133 -123202399 + MER45R DNA AcHobo 318 778 -803 681 183 10 147 chr5 79883137 79883334 -123202198 - FAM SINE Alu -9 40 1 3547 157 14 39 chr5 79883341 79883642 -123201890 + MER45R DNA AcHobo 770 1077 -504 719 111 28 0 chr5 79883642 79883750 -123201782 + HY1 scRNA scRNA 1 111 -1 3547 157 14 39 chr5 79883750 79884246 -123201286 + MER45R DNA AcHobo 1077 1547 -34 314 277 123 23 chr5 79884371 79884501 -123201031 - MIR3 SINE MIR -29 179 37 21 0 0 0 chr5 79884575 79884596 -123200936 + AT_rich Low_complexity Low_complexity 1 21 0 343 312 96 24 chr5 79884694 79884944 -123200588 - LTR33 LTR ERVL -253 268 1 1849 240 40 48 chr5 79886324 79886870 -123198662 - MLT1F LTR MaLR 0 542 1 180 0 0 0 chr5 79887143 79887163 -123198369 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1112 196 18 23 chr5 79887309 79887528 -123198004 - MER58A DNA MER1_type -3 221 4 301 333 44 9 chr5 79887690 79887804 -123197728 - MER89-int LTR ERV1 -1475 5326 5209 478 143 18 17 chr5 79938167 79938391 -123147141 + AluJo SINE Alu 7 301 -11 524 196 69 9 chr5 79938416 79938615 -123146917 - L1MEc LINE L1 -2323 3892 3596 270 193 0 0 chr5 79938631 79938688 -123146844 + CT-rich Low_complexity Low_complexity 3 59 0 3647 130 33 42 chr5 79938690 79939351 -123146181 - L1MC1 LINE L1 -2 6331 5677 1130 242 73 21 chr5 79939383 79939988 -123145544 - L1MEc LINE L1 -3530 2685 2082 3965 46 0 0 chr5 79940186 79940692 -123144840 + L1PA5 LINE L1 5656 6161 0 11785 187 29 11 chr5 79941220 79943791 -123141741 - L1PA15 LINE L1 -2 6163 3513 1841 177 3 0 chr5 79943791 79944090 -123141442 - AluJo SINE Alu -12 300 1 11785 187 29 11 chr5 79944090 79945054 -123140478 - L1PA15 LINE L1 -2652 3513 2568 583 291 57 16 chr5 79945733 79945980 -123139552 - L1ME3A LINE L1 -213 5951 5695 396 262 40 47 chr5 79946055 79946204 -123139328 - MIR SINE MIR -58 204 57 441 275 101 13 chr5 79946390 79946572 -123138960 - L1ME3A LINE L1 -464 5706 5509 503 238 82 27 chr5 79946928 79947075 -123138457 + MER58C DNA MER1_type 61 215 0 30 0 0 0 chr5 79947441 79947471 -123138061 + AT_rich Low_complexity Low_complexity 1 30 0 5042 166 31 8 chr5 79947471 79948428 -123137104 - L1MB3 LINE L1 -12 6171 5172 903 135 0 0 chr5 79948428 79948561 -123136971 - FLAM_C SINE Alu 0 133 1 5042 166 31 8 chr5 79948561 79948640 -123136892 - L1MB3 LINE L1 -1011 5172 5096 1819 230 103 4 chr5 79948899 79949356 -123136176 + MLT1J LTR MaLR 2 503 -8 459 265 65 92 chr5 79950133 79950329 -123135203 - MIR SINE MIR -8 254 65 2128 97 10 0 chr5 79950329 79950619 -123134913 + AluSx SINE Alu 1 293 -19 459 265 65 92 chr5 79950619 79950682 -123134850 - MIR SINE MIR -197 65 2 521 328 167 20 chr5 79950725 79951298 -123134234 - L2 LINE L2 -190 3082 2424 2694 232 39 31 chr5 79951905 79952687 -123132845 + L1M4 LINE L1 2559 3352 -2794 2175 118 15 51 chr5 79952687 79953076 -123132456 - THE1C LTR MaLR 0 375 1 2694 232 39 31 chr5 79953076 79953232 -123132300 + L1M4 LINE L1 3352 3505 -2641 3898 159 65 65 chr5 79953248 79954053 -123131479 + L1MCa LINE L1 20 824 -5602 997 92 0 65 chr5 79954128 79954281 -123131251 - AluSg/x SINE Alu -14 296 154 * 1419 138 5 5 chr5 79954280 79954490 -123131042 - AluSx SINE Alu -102 210 1 471 263 67 39 chr5 79954502 79954681 -123130851 + L1M4 LINE L1 4037 4220 -1926 4129 141 69 12 chr5 79954686 79955736 -123129796 + L1MCa LINE L1 811 1999 -4427 3725 162 58 44 chr5 79955736 79955818 -123129714 + MER44D DNA MER2_type 1 80 -2407 2003 120 3 14 chr5 79955818 79956109 -123129423 + AluSx SINE Alu 1 288 -24 702 0 0 0 chr5 79956113 79956191 -123129341 + (CAATA)n Simple_repeat Simple_repeat 4 81 0 3725 162 58 44 chr5 79956191 79956330 -123129202 + MER44D DNA MER2_type 82 218 -2269 2064 119 18 21 chr5 79956330 79956667 -123128865 - MER1B DNA MER1_type -1 336 1 3725 162 58 44 chr5 79956667 79957162 -123128370 + MER44D DNA MER2_type 218 605 0 2089 196 43 16 chr5 79957162 79958019 -123127513 + L1MCa LINE L1 2039 2927 -3499 * 2312 119 48 62 chr5 79958016 79958454 -123127078 + L1MC1 LINE L1 5677 6108 -225 2951 168 41 0 chr5 79958701 79959189 -123126343 + MLT2B3 LTR ERVL 1 508 -46 1449 236 38 12 chr5 79959551 79959894 -123125638 + MLT1F LTR MaLR 128 479 -63 505 250 98 12 chr5 79959985 79960149 -123125383 + MIR SINE MIR 70 247 -15 724 151 59 19 chr5 79960152 79960321 -123125211 + MER104 DNA Tc2 1 176 -4 23 0 0 0 chr5 79960577 79960600 -123124932 + AT_rich Low_complexity Low_complexity 1 23 0 1717 117 139 0 chr5 79960614 79960880 -123124652 + AluSq SINE Alu 3 305 -8 1985 196 79 17 chr5 79960900 79961380 -123124152 - MLT2B1 LTR ERVL -7 513 4 656 148 20 0 chr5 79961541 79961642 -123123890 + FLAM_C SINE Alu 20 122 -21 357 24 0 0 chr5 79961642 79961684 -123123848 + (TA)n Simple_repeat Simple_repeat 2 43 0 1875 145 35 0 chr5 79961706 79961996 -123123536 + AluSx SINE Alu 1 300 -12 221 281 12 12 chr5 79962073 79962155 -123123377 + (TCTG)n Simple_repeat Simple_repeat 2 83 0 21 0 0 0 chr5 79962690 79962711 -123122821 + AT_rich Low_complexity Low_complexity 1 21 0 2124 233 102 59 chr5 79962715 79962993 -123122539 + L1MC5 LINE L1 6044 6308 -1653 1056 225 159 4 chr5 79962993 79963251 -123122281 + AluJb SINE Alu 1 298 -4 2124 233 102 59 chr5 79963251 79964250 -123121282 + L1MC5 LINE L1 6308 7399 -562 1803 190 31 11 chr5 79964250 79964608 -123120924 - MLT1A1 LTR MaLR 0 365 1 2124 233 102 59 chr5 79964608 79964649 -123120883 + L1MC5 LINE L1 7399 7437 -524 225 267 0 38 chr5 79964649 79964754 -123120778 - LTR66 LTR ERVL -111 499 399 * 228 182 0 0 chr5 79964711 79964755 -123120777 + (TA)n Simple_repeat Simple_repeat 2 45 0 1803 169 0 28 chr5 79964798 79965118 -123120414 - AluJb SINE Alu -1 311 1 862 236 126 37 chr5 79965124 79965505 -123120027 + L1MC5 LINE L1 7499 7913 -48 1390 207 14 120 chr5 79966055 79966571 -123118961 + MER45R DNA AcHobo 318 778 -803 673 184 10 148 chr5 79966575 79966771 -123118761 - FAM SINE Alu -10 175 7 3477 158 15 39 chr5 79966778 79967079 -123118453 + MER45R DNA AcHobo 770 1077 -504 719 111 28 0 chr5 79967079 79967187 -123118345 + HY1 scRNA scRNA 1 111 -1 3477 158 15 39 chr5 79967187 79967682 -123117850 + MER45R DNA AcHobo 1077 1547 -34 314 277 123 23 chr5 79967807 79967937 -123117595 - MIR3 SINE MIR -29 179 37 21 0 0 0 chr5 79968011 79968032 -123117500 + AT_rich Low_complexity Low_complexity 1 21 0 343 312 96 24 chr5 79968130 79968380 -123117152 - LTR33 LTR ERVL -253 268 1 1849 240 40 48 chr5 79969760 79970306 -123115226 - MLT1F LTR MaLR 0 542 1 1150 202 14 22 chr5 79970737 79970960 -123114572 - MER58A DNA MER1_type 0 224 4 310 341 38 15 chr5 79971105 79971237 -123114295 - MER89-int LTR ERV1 -1458 5343 5209 209 79 53 26 chr5 79971448 79971486 -123114046 + T-rich Low_complexity Low_complexity 2 40 0 2756 125 66 0 chr5 79971630 79972054 -123113478 + MER1A DNA MER1_type 1 452 -77 2407 99 0 0 chr5 79972306 79972608 -123112924 + AluSx SINE Alu 1 302 -10 792 118 42 0 chr5 79973116 79973260 -123112272 - L1MB2 LINE L1 0 6171 6022 2442 164 12 21 chr5 79973260 79973692 -123111840 + MSTC LTR MaLR 1 428 0 808 197 149 9 chr5 79973694 79973922 -123111610 + MSTC-int LTR MaLR 2 261 -1474 428 369 34 24 chr5 79973920 79974332 -123111200 + L1M3b LINE L1 2 417 -5864 * 757 255 63 0 chr5 79974872 79975221 -123110311 + L1M3b LINE L1 1124 1494 -4787 884 226 27 15 chr5 79975358 79975685 -123109847 + MLT2B1 LTR ERVL 223 464 -56 248 243 19 65 chr5 79975947 79976054 -123109478 + MER113 DNA MER1_type? 5 106 -415 21 57 0 0 chr5 79976146 79976181 -123109351 + AT_rich Low_complexity Low_complexity 1 35 0 312 286 66 0 chr5 79976477 79976568 -123108964 + MIR SINE MIR 151 247 -15 191 322 130 9 chr5 79977194 79977309 -123108223 - L2 LINE L2 -12 3301 3173 517 286 42 42 chr5 79978053 79978266 -123107266 + MIR SINE MIR 7 219 -43 264 301 36 0 chr5 79978348 79978431 -123107101 - L2 LINE L2 0 3272 3187 194 238 168 59 chr5 79978497 79978598 -123106934 - MIR SINE MIR -125 137 26 851 81 8 32 chr5 79979104 79979228 -123106304 - AluSp SINE Alu -175 138 18 1304 97 0 0 chr5 79979228 79979403 -123106129 + AluSp SINE Alu 136 310 -3 217 302 0 16 chr5 79980974 79981037 -123104495 + MIR SINE MIR 23 84 -124 743 243 120 33 chr5 79981123 79981361 -123104171 + MIR SINE MIR 4 260 -2 2216 83 0 13 chr5 79981689 79981865 -123103667 - AluY SINE Alu -14 297 125 189 0 0 0 chr5 79981865 79981886 -123103646 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2216 83 0 13 chr5 79981886 79982010 -123103522 - AluY SINE Alu -186 125 1 284 364 0 0 chr5 79982180 79982279 -123103253 + MIR SINE MIR 3 101 -161 393 22 0 0 chr5 79982591 79982637 -123102895 + (TC)n Simple_repeat Simple_repeat 1 46 0 441 273 39 129 chr5 79983601 79983912 -123101620 + L2 LINE L2 2981 3263 -9 222 149 0 75 chr5 79983912 79983979 -123101553 + (GAGAA)n Simple_repeat Simple_repeat 4 65 0 2132 115 0 0 chr5 79983990 79984278 -123101254 + AluSx SINE Alu 23 310 -2 2063 158 89 20 chr5 79984604 79985053 -123100479 + MLT1D LTR MaLR 25 504 -1 1766 197 0 0 chr5 79986761 79987061 -123098471 - AluJb SINE Alu -12 300 1 2244 114 7 0 chr5 79988123 79988421 -123097111 + AluSp SINE Alu 1 300 -13 198 91 0 0 chr5 79988748 79988781 -123096751 + (A)n Simple_repeat Simple_repeat 1 33 0 24093 79 14 3 chr5 79989449 79992914 -123092618 + L1P LINE L1 3 3505 -2641 14907 178 31 13 chr5 79993018 79998098 -123087434 + L1MA4 LINE L1 2605 7713 -6 3720 229 85 98 chr5 79998109 79999622 -123085910 + MLT1D-int LTR MaLR 243 1735 0 874 129 27 7 chr5 79999622 79999769 -123085763 + MSTC LTR MaLR 1 150 -278 939 223 67 13 chr5 80002835 80003073 -123082459 + MIR SINE MIR 1 251 -11 27 0 0 0 chr5 80003170 80003197 -123082335 + AT_rich Low_complexity Low_complexity 1 27 0 295 241 0 75 chr5 80003636 80003782 -123081750 - L1ME LINE L1 -324 5797 5677 1016 228 33 0 chr5 80003810 80004021 -123081511 + MIR SINE MIR 11 228 -34 357 205 0 26 chr5 80004062 80004140 -123081392 - Tigger5 DNA MER2_type -1 2322 2247 2004 144 6 10 chr5 80004349 80004685 -123080847 - AluSx SINE Alu 0 335 1 359 291 78 0 chr5 80004937 80005040 -123080492 + L2 LINE L2 3203 3313 0 1860 160 4 0 chr5 80005436 80005711 -123079821 + AluSx SINE Alu 1 276 -36 200 205 0 0 chr5 80005940 80005979 -123079553 + MIR SINE MIR 158 196 -66 222 62 0 0 chr5 80006270 80006302 -123079230 + (TC)n Simple_repeat Simple_repeat 2 33 0 936 204 34 41 chr5 80006730 80006800 -123078732 - MSTD LTR MaLR 0 396 327 1802 113 85 3 chr5 80006800 80007082 -123078450 + AluJo SINE Alu 1 305 -7 936 204 34 41 chr5 80007082 80007338 -123078194 - MSTD LTR MaLR -69 327 31 700 189 98 0 chr5 80007342 80007511 -123078021 - FRAM SINE Alu 0 176 1 1890 110 3 27 chr5 80007936 80008290 -123077242 - MER4A LTR ERV1 0 664 261 580 101 10 20 chr5 80008290 80008389 -123077143 - MER4A LTR ERV1 -566 98 1 2036 151 0 3 chr5 80008748 80009053 -123076479 - AluJb SINE Alu -8 304 1 218 317 133 0 chr5 80009304 80009424 -123076108 + L2 LINE L2 3038 3173 -140 1667 132 44 0 chr5 80009428 80009679 -123075853 + MER1B DNA MER1_type 1 262 -77 629 101 11 0 chr5 80009679 80009768 -123075764 + MER1B DNA MER1_type 184 273 -66 408 137 27 0 chr5 80009820 80009893 -123075639 + MER1B DNA MER1_type 259 333 0 325 267 95 9 chr5 80010345 80010450 -123075082 + MIR3 SINE MIR 47 160 -48 26 0 0 0 chr5 80010496 80010522 -123075010 + AT_rich Low_complexity Low_complexity 1 26 0 182 33 67 0 chr5 80011139 80011169 -123074363 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1493 170 21 103 chr5 80013075 80013404 -123072128 + AluJo SINE Alu 1 302 -10 1457 170 21 21 chr5 80013413 80013695 -123071837 - AluJb SINE Alu -30 282 1 2335 68 34 7 chr5 80013727 80014023 -123071509 + AluSp SINE Alu 1 304 -9 584 305 138 35 chr5 80014256 80014915 -123070617 + HAL1 LINE L1 272 998 -1509 777 304 71 8 chr5 80015218 80015458 -123070074 - MIR SINE MIR 0 262 8 1776 157 143 14 chr5 80015629 80016070 -123069462 - L1MD1 LINE L1 -350 5892 5395 * 1873 248 38 33 chr5 80016053 80016851 -123068681 - L1MDa LINE L1 -2282 4258 3457 1057 168 88 67 chr5 80016852 80017061 -123068471 + L1MDa LINE L1 1920 2140 -4400 2390 90 3 3 chr5 80017061 80017371 -123068161 - AluSg SINE Alu 0 310 1 1057 168 88 67 chr5 80017371 80017489 -123068043 + L1MDa LINE L1 2140 2254 -4286 12369 133 16 52 chr5 80017574 80018080 -123067452 - L1P3 LINE L1 -3134 3327 2804 3955 158 51 20 chr5 80018080 80018841 -123066691 + LTR1 LTR ERV1 1 785 0 12369 133 16 52 chr5 80018841 80019171 -123066361 - L1P3 LINE L1 -3657 2804 2464 19030 132 10 1 chr5 80019171 80022886 -123062646 - L1PA7 LINE L1 0 6154 2412 12369 133 16 52 chr5 80022886 80025472 -123060060 - L1P3 LINE L1 -3997 2464 1 733 161 53 53 chr5 80025483 80025726 -123059806 - L1MDa LINE L1 -3981 2559 2317 636 206 62 31 chr5 80025742 80026033 -123059499 + MSTD LTR MaLR 1 396 0 2791 174 93 2 chr5 80026045 80026679 -123058853 - L1MDa LINE L1 -4218 2322 1631 * 4066 191 50 18 chr5 80026675 80028801 -123056731 - L1MB7 LINE L1 0 6886 1091 23 0 0 0 chr5 80028801 80028824 -123056708 + AT_rich Low_complexity Low_complexity 1 23 0 1904 219 39 7 chr5 80028878 80029317 -123056215 - L1MDa LINE L1 -6071 469 17 2296 103 0 16 chr5 80029693 80030005 -123055527 - AluSx SINE Alu -3 309 3 194 333 130 32 chr5 80030268 80030391 -123055141 - MIR SINE MIR -124 138 4 22 113 0 0 chr5 80030513 80030619 -123054913 + AT_rich Low_complexity Low_complexity 1 106 0 333 267 93 104 chr5 80032685 80033041 -123052491 - L1MB7 LINE L1 -5759 1090 739 1162 172 11 26 chr5 80034993 80035260 -123050272 - MSTB2 LTR MaLR 0 457 195 368 138 0 0 chr5 80035264 80035322 -123050210 - MSTB2 LTR MaLR -399 58 1 537 254 285 0 chr5 80035702 80035895 -123049637 + MIR SINE MIR 2 249 -13 407 261 220 14 chr5 80035940 80036158 -123049374 - L1ME4a LINE L1 -55 6066 5804 339 230 164 24 chr5 80036175 80036340 -123049192 - L1ME4a LINE L1 -365 5756 5569 317 330 87 9 chr5 80036550 80036665 -123048867 - MIR SINE MIR -113 149 26 25 31 0 0 chr5 80037498 80037530 -123048002 + AT_rich Low_complexity Low_complexity 1 32 0 426 158 26 0 chr5 80037877 80037953 -123047579 - MER58C DNA MER1_type 0 215 138 2141 119 3 3 chr5 80038574 80038876 -123046656 - AluSx SINE Alu -10 302 1 307 125 0 0 chr5 80038895 80038951 -123046581 - Alu SINE Alu 0 302 247 7181 253 131 37 chr5 80038971 80041272 -123044260 + L2 LINE L2 234 2823 -490 1379 158 174 19 chr5 80041272 80041388 -123044144 + MLT1A1 LTR MaLR 1 98 -267 2271 98 0 0 chr5 80041388 80041683 -123043849 + AluY SINE Alu 1 295 -16 1379 158 174 19 chr5 80041683 80041882 -123043650 + MLT1A1 LTR MaLR 98 365 0 7181 253 131 37 chr5 80041882 80042251 -123043281 + L2 LINE L2 2823 3156 -157 672 190 156 11 chr5 80042252 80042431 -123043101 + MER58C DNA MER1_type 2 206 -9 552 232 71 39 chr5 80042431 80042586 -123042946 + L2 LINE L2 3150 3309 -4 1038 284 103 58 chr5 80042957 80043698 -123041834 - L2 LINE L2 -177 3136 2350 1209 172 9 28 chr5 80043700 80043915 -123041617 + AluJb SINE Alu 87 297 -15 347 197 13 13 chr5 80043935 80044011 -123041521 - L2 LINE L2 -975 2339 2264 364 252 178 26 chr5 80044060 80044366 -123041166 - L2 LINE L2 -1202 2112 1692 793 265 68 49 chr5 80044367 80044778 -123040754 - L1MC4 LINE L1 -3 8039 7621 205 304 130 51 chr5 80045642 80045780 -123039752 - MIR3 SINE MIR -25 183 35 21 36 0 0 chr5 80047517 80047545 -123037987 + AT_rich Low_complexity Low_complexity 1 28 0 412 285 94 34 chr5 80048004 80048386 -123037146 - L1ME LINE L1 -396 5725 5321 205 156 0 0 chr5 80048740 80048772 -123036760 + GA-rich Low_complexity Low_complexity 1 32 0 334 235 0 0 chr5 80049301 80049369 -123036163 - AluS SINE Alu -235 68 1 306 269 43 0 chr5 80049390 80049483 -123036049 + MIR3 SINE MIR 111 207 -1 5819 128 81 45 chr5 80049998 80051165 -123034367 + Tigger3b DNA MER2_type 22 1230 -1 1086 199 72 101 chr5 80051302 80051678 -123033854 - MLT1A1 LTR MaLR 0 365 1 3581 197 156 13 chr5 80051678 80053140 -123032392 - MLT1A1-int LTR MaLR 0 1735 1 1273 193 12 120 chr5 80053140 80053549 -123031983 - MLT1A1 LTR MaLR 0 365 1 386 307 16 24 chr5 80053768 80053914 -123031618 - MIR SINE MIR -65 143 10 330 264 207 14 chr5 80054753 80054930 -123030602 + MIR SINE MIR 7 216 -46 260 188 42 0 chr5 80055768 80055816 -123029716 - MER5B DNA MER1_type -128 50 1 734 242 95 26 chr5 80056180 80056411 -123029121 + MIR SINE MIR 1 247 -15 603 253 124 14 chr5 80056414 80056613 -123028919 + MIR SINE MIR 2 214 -48 2310 74 13 3 chr5 80057103 80057401 -123028131 - AluSq SINE Alu -12 301 1 1510 83 64 10 chr5 80057418 80057622 -123027910 - AluSg SINE Alu -95 215 1 217 296 61 51 chr5 80057934 80058032 -123027500 + MIR SINE MIR 91 189 -73 681 214 248 5 chr5 80058276 80058486 -123027046 + MIR SINE MIR 2 262 0 1127 231 89 27 chr5 80059054 80059295 -123026237 + MER20B DNA MER1_type 71 340 -443 2383 95 0 9 chr5 80059295 80059610 -123025922 + AluSx SINE Alu 1 312 0 1127 231 89 27 chr5 80059610 80059705 -123025827 + MER20B DNA MER1_type 340 428 -355 182 392 75 55 chr5 80059815 80060014 -123025518 + L2 LINE L2 3047 3249 -23 267 313 246 0 chr5 80060037 80060171 -123025361 - L2 LINE L2 -3 3269 3103 267 281 52 21 chr5 80060338 80060434 -123025098 - L2 LINE L2 -257 3015 2917 436 239 56 35 chr5 80060654 80060796 -123024736 - MIR SINE MIR -114 148 4 281 111 167 0 chr5 80061469 80061536 -123023996 + L1MB3 LINE L1 6106 6176 0 245 293 57 32 chr5 80062036 80062159 -123023373 + L1MC4a LINE L1 5507 5632 -2176 281 319 49 13 chr5 80062181 80062407 -123023125 + L1MC4a LINE L1 5678 5911 -1897 443 303 41 28 chr5 80062606 80062824 -123022708 + L1ME3A LINE L1 5950 6170 0 318 296 126 63 chr5 80064449 80064766 -123020766 + L1M2 LINE L1 395 731 -6118 315 295 111 62 chr5 80064609 80065046 -123020486 - L1M2 LINE L1 -5650 1199 756 * 23 0 0 0 chr5 80066128 80066151 -123019381 + AT_rich Low_complexity Low_complexity 1 23 0 1771 163 3 7 chr5 80067496 80067778 -123017754 - AluSx SINE Alu -31 281 1 473 174 50 16 chr5 80068288 80068409 -123017123 - L2 LINE L2 -3 3310 3186 25 65 0 0 chr5 80068955 80069001 -123016531 + AT_rich Low_complexity Low_complexity 1 46 0 1363 152 70 29 chr5 80069153 80069397 -123016135 + AluJb SINE Alu 1 254 -58 290 294 59 0 chr5 80069793 80069878 -123015654 - MIR3 SINE MIR 0 208 119 440 307 59 30 chr5 80070483 80070685 -123014847 + MIR SINE MIR 52 259 -3 1583 137 87 18 chr5 80070979 80071256 -123014276 - AluSg SINE Alu -14 296 1 913 177 141 0 chr5 80071396 80071588 -123013944 + MER20 DNA MER1_type 1 219 0 2167 97 24 3 chr5 80072219 80072517 -123013015 - AluSq SINE Alu -9 304 1 2138 97 21 7 chr5 80073025 80073314 -123012218 + AluSx SINE Alu 3 295 -17 509 216 38 54 chr5 80074149 80074334 -123011198 + L1MC5 LINE L1 7744 7925 -36 2487 65 0 0 chr5 80074540 80074833 -123010699 + AluY SINE Alu 1 293 -18 867 185 49 22 chr5 80075186 80075370 -123010162 - MER20 DNA MER1_type 0 219 31 30 27 0 0 chr5 80075440 80075477 -123010055 + AT_rich Low_complexity Low_complexity 1 37 0 242 288 30 23 chr5 80075671 80075803 -123009729 - L1ME LINE L1 -412 5709 5577 259 227 200 0 chr5 80076184 80076259 -123009273 - MIR SINE MIR -11 251 162 2362 81 7 0 chr5 80076899 80077195 -123008337 - AluSp SINE Alu -15 298 1 1712 164 14 7 chr5 80077401 80077687 -123007845 - AluJb SINE Alu -24 288 1 1737 154 27 20 chr5 80078306 80078605 -123006927 - AluJo SINE Alu -5 307 7 2067 143 0 7 chr5 80078624 80078932 -123006600 - AluSx SINE Alu -6 306 1 306 0 0 0 chr5 80078977 80079011 -123006521 + (TG)n Simple_repeat Simple_repeat 1 34 0 629 152 221 7 chr5 80079326 80079466 -123006066 + AluJb SINE Alu 8 179 -129 1889 116 84 7 chr5 80079466 80079741 -123005791 + AluSq SINE Alu 5 300 -13 31 82 0 0 chr5 80080210 80080283 -123005249 + AT_rich Low_complexity Low_complexity 1 73 0 2271 107 0 0 chr5 80080594 80080893 -123004639 - AluSx SINE Alu -13 299 1 2074 108 14 0 chr5 80081147 80081435 -123004097 + AluSx SINE Alu 4 295 -17 1386 137 61 11 chr5 80082032 80082295 -123003237 - L1PA16 LINE L1 0 6166 5891 1838 188 0 0 chr5 80082456 80082759 -123002773 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 80082800 80082826 -123002706 + AT_rich Low_complexity Low_complexity 1 26 0 1493 170 41 26 chr5 80082896 80083166 -123002366 + AluJo SINE Alu 20 293 -19 335 244 153 78 chr5 80083726 80084033 -123001499 - L1ME LINE L1 -2182 5603 5274 2623 55 0 0 chr5 80084135 80084444 -123001088 + AluY SINE Alu 1 309 -2 1907 83 4 12 chr5 80084752 80085006 -123000526 + AluSq SINE Alu 44 295 -18 497 245 137 9 chr5 80085012 80085245 -123000287 - MER114 LTR ERV -104 544 282 2118 135 0 0 chr5 80085249 80085546 -122999986 + AluSx SINE Alu 1 297 -15 374 222 118 39 chr5 80085585 80085738 -122999794 - MER114 LTR ERV -462 186 22 234 135 0 0 chr5 80085954 80085991 -122999541 - L1MC5 LINE L1 -1219 6742 6706 326 304 40 0 chr5 80086014 80086139 -122999393 - L1ME LINE L1 -1479 4667 4538 2154 109 3 7 chr5 80086143 80086446 -122999086 - AluSq SINE Alu -11 302 1 331 268 25 57 chr5 80086455 80086612 -122998920 - L1ME LINE L1 -1665 4481 4330 200 217 0 121 chr5 80086865 80086948 -122998584 - MIR SINE MIR -42 220 148 2314 71 0 24 chr5 80086964 80087261 -122998271 - AluSx SINE Alu -22 290 1 357 309 193 14 chr5 80087436 80087798 -122997734 - L2 LINE L2 -73 3240 2814 576 221 186 17 chr5 80087821 80087993 -122997539 + MER58C DNA MER1_type 2 202 -13 400 303 40 50 chr5 80088034 80088232 -122997300 - L2 LINE L2 -626 2688 2493 210 259 0 56 chr5 80089546 80089600 -122995932 - L2 LINE L2 -20 3252 3202 412 281 97 13 chr5 80089648 80089886 -122995646 + MIR SINE MIR 3 260 -2 214 245 0 38 chr5 80090204 80090257 -122995275 + L2 LINE L2 3263 3313 0 207 190 190 0 chr5 80090992 80091071 -122994461 + MIR SINE MIR 96 189 -73 235 283 0 0 chr5 80092734 80092787 -122992745 - MER5B DNA MER1_type 0 178 126 2533 62 0 3 chr5 80092797 80093102 -122992430 + AluY SINE Alu 1 304 -7 201 154 0 0 chr5 80093571 80093610 -122991922 + T-rich Low_complexity Low_complexity 2 40 0 303 284 85 19 chr5 80094154 80094365 -122991167 - L1ME LINE L1 -359 5762 5538 478 246 9 9 chr5 80095528 80095642 -122989890 - FLAM_C SINE Alu -27 116 3 1908 144 3 23 chr5 80095890 80096189 -122989343 + AluSx SINE Alu 1 293 -19 2232 113 0 7 chr5 80096519 80096819 -122988713 + AluSx SINE Alu 3 300 -12 1944 107 0 0 chr5 80097088 80097350 -122988182 - AluSg SINE Alu -5 305 44 210 91 0 0 chr5 80099162 80099195 -122986337 + (ATG)n Simple_repeat Simple_repeat 2 34 0 2994 176 92 24 chr5 80099255 80099712 -122985820 - L1MB8 LINE L1 -5 6173 5749 213 65 0 0 chr5 80099712 80099743 -122985789 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1524 151 21 48 chr5 80099743 80100034 -122985498 - AluJb SINE Alu -29 283 1 2994 176 92 24 chr5 80100034 80100291 -122985241 - L1MB8 LINE L1 -428 5750 5409 198 258 113 0 chr5 80100546 80100608 -122984924 + MER5B DNA MER1_type 4 72 -106 675 112 124 189 chr5 80100689 80100922 -122984610 - MER20 DNA MER1_type 0 219 2 355 255 102 79 chr5 80101053 80101269 -122984263 - MIR SINE MIR -5 257 37 201 154 0 0 chr5 80101706 80101745 -122983787 + T-rich Low_complexity Low_complexity 3 41 0 278 105 0 0 chr5 80101822 80101860 -122983672 - MSTD LTR MaLR -2 455 418 * 1094 239 107 4 chr5 80101858 80102130 -122983402 - MSTD LTR MaLR -96 300 1 22 0 0 0 chr5 80102176 80102198 -122983334 + AT_rich Low_complexity Low_complexity 1 22 0 2180 108 27 0 chr5 80102601 80102896 -122982636 + AluSg SINE Alu 1 303 -7 1990 147 17 0 chr5 80103392 80103692 -122981840 + AluSx SINE Alu 1 305 -7 2276 107 0 0 chr5 80105043 80105341 -122980191 - AluSx SINE Alu -13 299 2 210 268 232 43 chr5 80105440 80105604 -122979928 - L2 LINE L2 0 3313 3119 1701 167 39 0 chr5 80106845 80107127 -122978405 - AluJb SINE Alu -19 293 1 2307 88 3 0 chr5 80107171 80107465 -122978067 + AluY SINE Alu 3 297 -14 923 152 0 7 chr5 80108532 80108677 -122976855 + MER2 DNA MER2_type 1 144 -201 246 269 0 0 chr5 80108680 80108732 -122976800 + MER2 DNA MER2_type 269 320 -25 531 141 0 71 chr5 80110126 80110225 -122975307 + AluS SINE Alu 3 94 -219 2069 132 0 0 chr5 80110374 80110663 -122974869 + AluY SINE Alu 1 289 -22 309 288 141 42 chr5 80110900 80111091 -122974441 - L1MC5 LINE L1 -32 7929 7720 1300 201 74 66 chr5 80111096 80111383 -122974149 - L1MC5 LINE L1 -477 7484 7190 1010 190 42 32 chr5 80111383 80111599 -122973933 + MER20 DNA MER1_type 2 219 0 1300 201 74 66 chr5 80111599 80111814 -122973718 - L1MC5 LINE L1 -771 7190 6978 449 226 52 0 chr5 80111936 80112070 -122973462 - L1MC5 LINE L1 -1148 6888 6693 21 0 0 0 chr5 80112250 80112271 -122973261 + AT_rich Low_complexity Low_complexity 1 21 0 2206 108 7 0 chr5 80112572 80112869 -122972663 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr5 80112906 80112941 -122972591 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr5 80113602 80113633 -122971899 + AT_rich Low_complexity Low_complexity 1 31 0 534 225 92 32 chr5 80117592 80117810 -122967722 + L1MC5 LINE L1 7307 7537 -424 1799 100 8 4 chr5 80117823 80118073 -122967459 + AluSg SINE Alu 43 293 -17 321 116 0 0 chr5 80120455 80120498 -122965034 - THE1B LTR MaLR 0 355 313 2200 99 0 3 chr5 80120498 80120780 -122964752 + AluSq SINE Alu 1 281 -32 1940 133 36 39 chr5 80120796 80121133 -122964399 - THE1B LTR MaLR -28 336 1 1950 158 0 7 chr5 80121597 80121900 -122963632 + AluSx SINE Alu 1 301 -11 2143 105 20 7 chr5 80122259 80122563 -122962969 - AluSg SINE Alu 0 310 3 249 269 0 0 chr5 80123660 80123712 -122961820 - MER2 DNA MER2_type -25 320 269 939 152 0 7 chr5 80123715 80123860 -122961672 - MER2 DNA MER2_type -201 144 1 1975 95 0 0 chr5 80124927 80125180 -122960352 - AluSg SINE Alu -14 296 44 210 91 0 0 chr5 80126991 80127024 -122958508 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1355 174 82 20 chr5 80127084 80127388 -122958144 - L1MB8 LINE L1 -5 6173 5851 1626 185 3 32 chr5 80128411 80128719 -122956813 + AluJb SINE Alu 1 299 -13 25 31 0 0 chr5 80129770 80129802 -122955730 + AT_rich Low_complexity Low_complexity 1 32 0 213 39 0 0 chr5 80131478 80131504 -122954028 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 80131996 80132047 -122953485 + AT_rich Low_complexity Low_complexity 1 51 0 2101 137 7 0 chr5 80135630 80135936 -122949596 - AluSx SINE Alu -4 308 1 1471 116 32 97 chr5 80136640 80136951 -122948581 - AluSx SINE Alu -20 292 2 265 264 135 27 chr5 80137314 80137462 -122948070 - L1MB8 LINE L1 -344 5777 5612 1007 274 265 27 chr5 80137653 80138572 -122946960 - L2 LINE L2 -85 3228 2078 856 168 15 0 chr5 80139149 80139280 -122946252 + FLAM_C SINE Alu 1 133 0 1405 181 12 12 chr5 80139296 80139550 -122945982 + AluJo SINE Alu 34 287 -25 232 328 96 0 chr5 80139774 80139899 -122945633 + L1MC/D LINE L1 5474 5610 -2198 419 267 98 79 chr5 80139992 80140310 -122945222 + L1ME LINE L1 5448 5771 -391 192 40 0 0 chr5 80140604 80140629 -122944903 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2105 107 10 13 chr5 80140677 80140987 -122944545 - AluSq SINE Alu 0 313 5 256 146 0 0 chr5 80141138 80141179 -122944353 - MADE1 DNA Mariner 0 80 40 351 248 170 33 chr5 80141816 80141969 -122943563 - MER5A DNA MER1_type -7 182 9 546 246 0 16 chr5 80142030 80142152 -122943380 + L2 LINE L2 3192 3311 -2 403 211 274 46 chr5 80142159 80142334 -122943198 - MIR SINE MIR -47 215 1 1328 116 40 5 chr5 80143177 80143376 -122942156 - THE1C LTR MaLR -169 206 1 355 265 43 28 chr5 80143385 80143563 -122941969 - L1MEd LINE L1 -839 1811 1308 2355 74 0 7 chr5 80143563 80143904 -122941628 - AluSp SINE Alu 0 341 3 866 293 117 49 chr5 80144025 80144184 -122941348 - L1MEd LINE L1 -4862 1257 1110 507 17 0 0 chr5 80144184 80144244 -122941288 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2038 109 0 7 chr5 80144244 80144520 -122941012 - AluSx SINE Alu -38 274 1 866 293 117 49 chr5 80144520 80144764 -122940768 - L1MEd LINE L1 -5009 1110 884 1757 165 46 0 chr5 80144764 80145049 -122940483 - AluJo SINE Alu -14 298 1 866 293 117 49 chr5 80145049 80145514 -122940018 - L1MEd LINE L1 -5235 884 328 2214 98 9 28 chr5 80145652 80145969 -122939563 + AluSx SINE Alu 1 311 -1 62734 90 32 19 chr5 80145976 80155757 -122929775 + HERV9 LTR ERV1 17 8399 0 2335 179 16 35 chr5 80155764 80156327 -122929205 + pTR5 LTR ERV1 795 1346 -1092 4866 114 52 0 chr5 80156341 80156989 -122928543 + LTR12 LTR ERV1 5 686 -2 1903 259 88 16 chr5 80157153 80157697 -122927835 - MLT1G1 LTR MaLR -9 586 4 687 253 112 0 chr5 80157910 80158088 -122927444 + MIR SINE MIR 41 238 -24 724 228 20 33 chr5 80158957 80159165 -122926367 - MER63 DNA MER1_type 0 1688 1 478 290 84 95 chr5 80159413 80159637 -122925895 + HAL1 LINE L1 844 1069 -1438 2253 102 14 0 chr5 80159637 80159930 -122925602 + AluSx SINE Alu 1 297 -15 478 290 84 95 chr5 80159930 80160079 -122925453 + HAL1 LINE L1 1069 1218 -1289 2261 95 3 7 chr5 80160079 80160384 -122925148 + AluY SINE Alu 1 304 -7 478 290 84 95 chr5 80160384 80160547 -122924985 + HAL1 LINE L1 1218 1375 -1132 2330 77 0 7 chr5 80161356 80161655 -122923877 + AluY SINE Alu 1 297 -14 1141 76 45 0 chr5 80161860 80162017 -122923515 - AluY SINE Alu -15 296 133 2497 49 0 20 chr5 80162017 80162321 -122923211 - AluY SINE Alu -13 298 1 1636 188 0 14 chr5 80162332 80162625 -122922907 - AluJo SINE Alu -23 289 1 2044 144 0 0 chr5 80162654 80162952 -122922580 + AluSx SINE Alu 1 298 -14 204 226 0 0 chr5 80163203 80163256 -122922276 + T-rich Low_complexity Low_complexity 1 53 0 2172 80 10 3 chr5 80163320 80163608 -122921924 + AluSc SINE Alu 1 290 -19 201 227 27 27 chr5 80163712 80163787 -122921745 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 235 157 0 59 chr5 80163787 80163838 -122921694 - L1MC4 LINE L1 -1337 6705 6658 228 125 0 50 chr5 80163922 80163962 -122921570 + MER63 DNA MER1_type 1 38 -892 735 275 54 21 chr5 80163964 80164204 -122921328 + L2 LINE L2 2657 2904 -410 26 39 0 20 chr5 80164335 80164373 -122921159 + AT_rich Low_complexity Low_complexity 1 39 -11 2170 111 3 0 chr5 80164373 80164661 -122920871 - AluSq SINE Alu -24 289 1 26 39 0 20 chr5 80164661 80164673 -122920859 + AT_rich Low_complexity Low_complexity 39 50 0 2015 119 0 17 chr5 80164673 80164966 -122920566 - AluJb SINE Alu -24 288 1 963 228 10 5 chr5 80164969 80165177 -122920355 - MIR SINE MIR -54 208 2 1281 156 26 0 chr5 80165196 80165427 -122920105 - L1MA8 LINE L1 -4 6287 6051 505 214 71 125 chr5 80165457 80165681 -122919851 + L2 LINE L2 3102 3313 0 917 107 18 35 chr5 80166219 80166388 -122919144 - AluSg/x SINE Alu -15 294 129 424 209 86 123 chr5 80166872 80167092 -122918440 - L2 LINE L2 0 3313 3102 1095 151 40 0 chr5 80167121 80167346 -122918186 + L1MA8 LINE L1 6051 6284 -7 790 226 39 7 chr5 80167368 80167569 -122917963 + MIR SINE MIR 2 206 -56 1792 149 24 7 chr5 80168323 80168619 -122916913 + AluJo SINE Alu 1 301 -11 1558 225 3 0 chr5 80168854 80169165 -122916367 - AluJo SINE Alu 0 312 1 193 281 14 75 chr5 80169601 80169747 -122915785 + L2 LINE L2 2206 2342 -972 1378 265 57 37 chr5 80169759 80170543 -122914989 + L2 LINE L2 2509 3310 -3 609 184 26 0 chr5 80172772 80172886 -122912646 + FLAM_A SINE Alu 13 129 -13 815 128 0 8 chr5 80172989 80173106 -122912426 - FLAM_C SINE Alu -19 124 9 665 180 23 0 chr5 80173664 80173792 -122911740 + Tigger1 DNA MER2_type 7 137 -2281 690 141 152 61 chr5 80173798 80173996 -122911536 + Tigger1 DNA MER2_type 2202 2417 -1 585 135 0 0 chr5 80174079 80174168 -122911364 - Tigger7 DNA MER2_type 0 2487 2399 867 190 222 0 chr5 80174204 80174420 -122911112 - Tigger7 DNA MER2_type -469 264 1 2097 115 7 13 chr5 80174522 80174826 -122910706 + AluSx SINE Alu 4 305 -7 26 0 0 0 chr5 80175065 80175091 -122910441 + AT_rich Low_complexity Low_complexity 1 26 0 228 35 0 0 chr5 80175273 80175302 -122910230 + (A)n Simple_repeat Simple_repeat 1 29 0 1863 150 0 27 chr5 80175354 80175654 -122909878 + AluJo SINE Alu 1 292 -20 17552 33 0 0 chr5 80175953 80178856 -122906676 + L1PA3 LINE L1 3253 6155 0 424 264 92 0 chr5 80178889 80179052 -122906480 + HsTC2 DNA Tc2 1524 1701 -197 180 222 56 0 chr5 80179294 80179330 -122906202 + L2 LINE L2 3238 3275 -38 347 376 6 19 chr5 80179372 80179529 -122906003 - L2 LINE L2 -543 2771 2617 661 151 34 0 chr5 80179758 80179877 -122905655 + FLAM_C SINE Alu 2 124 -19 609 184 26 0 chr5 80179980 80180094 -122905438 - FLAM_A SINE Alu -13 129 13 1840 170 10 0 chr5 80180661 80180961 -122904571 + AluSx SINE Alu 1 303 -9 2164 114 7 0 chr5 80181276 80181574 -122903958 - AluSx SINE Alu -12 300 1 2393 78 0 0 chr5 80181584 80181878 -122903654 - AluY SINE Alu -17 294 1 222 200 0 0 chr5 80181922 80181962 -122903570 + (TATG)n Simple_repeat Simple_repeat 3 42 0 295 300 92 33 chr5 80182913 80183033 -122902499 - L2 LINE L2 0 3272 3146 504 265 17 94 chr5 80183167 80183348 -122902184 + L2 LINE L2 7 173 -3141 552 262 43 64 chr5 80183396 80183629 -122901903 + L2 LINE L2 3086 3313 0 2328 97 0 7 chr5 80184092 80184391 -122901141 - AluSx SINE Alu -15 297 1 2071 87 45 3 chr5 80184733 80185021 -122900511 - AluSq SINE Alu -11 302 3 2188 92 0 3 chr5 80185196 80185507 -122900025 + AluSg SINE Alu 1 310 0 544 268 35 0 chr5 80185643 80185785 -122899747 + MIR SINE MIR 66 212 -50 2567 274 116 40 chr5 80185886 80186620 -122898912 + L2 LINE L2 1547 2224 -1089 2161 121 3 10 chr5 80186620 80186926 -122898606 + AluSx SINE Alu 1 304 -8 2567 274 116 40 chr5 80186926 80187250 -122898282 + L2 LINE L2 2224 2522 -791 2300 98 0 0 chr5 80187250 80187546 -122897986 - AluSx SINE Alu -16 296 1 2567 274 116 40 chr5 80187546 80188126 -122897406 + L2 LINE L2 2522 3313 0 228 185 19 37 chr5 80188471 80188525 -122897007 + GA-rich Low_complexity Low_complexity 4 56 0 285 242 0 0 chr5 80188585 80188647 -122896885 - L2 LINE L2 0 3313 3252 1827 168 7 3 chr5 80188727 80189019 -122896513 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr5 80189186 80189207 -122896325 + AT_rich Low_complexity Low_complexity 1 21 0 2318 115 0 0 chr5 80189271 80189575 -122895957 - AluSg SINE Alu -6 304 1 2233 112 0 3 chr5 80189691 80189996 -122895536 - AluSx SINE Alu -8 304 1 28 0 0 0 chr5 80191218 80191246 -122894286 + AT_rich Low_complexity Low_complexity 1 28 0 2411 103 0 0 chr5 80191261 80191563 -122893969 + AluSx SINE Alu 1 302 -10 2257 109 3 0 chr5 80191709 80192013 -122893519 + AluSq SINE Alu 1 305 -8 229 211 123 0 chr5 80192086 80192143 -122893389 - L2 LINE L2 0 3272 3209 1940 228 96 10 chr5 80192591 80193091 -122892441 - Zaphod DNA AcHobo -3482 549 7 340 316 141 69 chr5 80194519 80195072 -122890460 - L1M2 LINE L1 -5422 1427 835 3519 172 69 41 chr5 80195729 80197244 -122888288 - L1MB7 LINE L1 0 6184 4625 235 196 0 0 chr5 80197441 80197497 -122888035 - L1M4 LINE L1 -455 5729 5674 1971 159 3 7 chr5 80197745 80198047 -122887485 + AluJo SINE Alu 1 301 -11 1587 228 0 0 chr5 80198289 80198601 -122886931 - AluJo SINE Alu 0 312 1 2343 80 13 0 chr5 80200103 80200402 -122885130 - AluSp SINE Alu -10 303 1 2300 100 0 0 chr5 80201124 80201415 -122884117 + AluSc SINE Alu 1 291 -18 15276 31 0 0 chr5 80201870 80203822 -122881710 - L1P LINE L1 -2369 3777 1826 244 380 0 0 chr5 80203822 80203901 -122881631 + L2 LINE L2 2992 3070 -202 22 70 0 0 chr5 80203947 80203990 -122881542 + AT_rich Low_complexity Low_complexity 1 43 0 201 153 153 34 chr5 80204015 80204074 -122881458 + L2 LINE L2 3242 3307 -6 189 0 0 0 chr5 80204116 80204137 -122881395 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 911 169 0 7 chr5 80204137 80204285 -122881247 - AluSg/x SINE Alu -29 280 134 2001 148 0 16 chr5 80204287 80204598 -122880934 - AluSx SINE Alu -6 306 1 2447 144 25 14 chr5 80204600 80205036 -122880496 - L1MC1 LINE L1 -506 5827 5387 1049 213 142 0 chr5 80205044 80205297 -122880235 - AluJo SINE Alu -18 294 6 528 147 7 44 chr5 80205304 80205440 -122880092 - L1MC1 LINE L1 -940 5393 5263 * 27533 93 7 9 chr5 80205423 80208176 -122877356 - L1PA7 LINE L1 -6 6463 3732 2889 3 0 0 chr5 80208176 80208487 -122877045 - AluY SINE Alu 0 311 1 27533 93 7 9 chr5 80208487 80210810 -122874722 - L1PA7 LINE L1 -2737 3732 1406 2570 102 3 0 chr5 80210806 80211170 -122874362 - L1PA7 LINE L1 -6096 365 1 * 684 228 11 0 chr5 80211173 80211362 -122874170 - L1MC1 LINE L1 -852 5294 5104 892 198 0 47 chr5 80211475 80211707 -122873825 - L1MC1 LINE L1 -1050 5096 4876 2197 81 17 7 chr5 80211708 80212004 -122873528 - AluY SINE Alu -12 299 1 1028 48 0 62 chr5 80212012 80212157 -122873375 - L1PA7 LINE L1 -16 6138 6003 1387 161 60 85 chr5 80212161 80212477 -122873055 - AluJb SINE Alu 0 312 5 439 222 0 0 chr5 80212485 80212584 -122872948 - L1MC1 LINE L1 -1387 4759 4661 * 1005 261 26 32 chr5 80212582 80212946 -122872586 - L1ME LINE L1 -381 6134 5771 931 307 41 4 chr5 80212969 80213457 -122872075 - L1ME LINE L1 -2285 4255 3750 1426 166 120 12 chr5 80213467 80213726 -122871806 - AluJb SINE Alu -25 287 1 775 220 65 67 chr5 80213731 80213958 -122871574 - L1MC5 LINE L1 -412 7549 7322 2185 103 3 3 chr5 80213958 80214249 -122871283 - AluSx SINE Alu -18 294 4 775 220 65 67 chr5 80214249 80214393 -122871139 - L1MC5 LINE L1 -639 7322 7179 22 0 0 0 chr5 80214438 80214460 -122871072 + AT_rich Low_complexity Low_complexity 1 22 0 426 247 9 67 chr5 80214547 80214771 -122870761 - L1ME LINE L1 -4929 1792 1433 303 218 39 0 chr5 80214966 80215044 -122870488 - L1ME LINE L1 -5164 1376 1296 1781 139 5 72 chr5 80215448 80215657 -122869875 - MER46B DNA MER2_type -2495 236 15 2385 71 13 3 chr5 80215657 80215965 -122869567 - AluY SINE Alu 0 311 1 1781 139 5 72 chr5 80215965 80216121 -122869411 - MER46B DNA MER2_type -2716 15 20 2426 88 0 0 chr5 80216121 80216427 -122869105 - AluSq SINE Alu -7 306 1 1781 139 5 72 chr5 80216427 80216447 -122869085 - MER46B DNA MER2_type -2710 21 1 2337 86 0 0 chr5 80216947 80217237 -122868295 + AluSg SINE Alu 1 290 -20 1906 159 7 3 chr5 80217716 80218006 -122867526 + AluJo SINE Alu 1 291 -21 180 231 58 0 chr5 80219743 80219795 -122865737 - MIR SINE MIR -63 145 91 2215 102 3 0 chr5 80219868 80220153 -122865379 - AluSq SINE Alu -27 286 1 250 154 0 0 chr5 80220964 80221003 -122864529 + MER4E LTR ERV1 654 692 -74 365 296 66 84 chr5 80221779 80222158 -122863374 + L1MEd LINE L1 685 1056 -5063 335 212 38 76 chr5 80222163 80222295 -122863237 + L1MEd LINE L1 1112 1238 -4881 731 216 238 19 chr5 80222374 80222643 -122862889 + HsTC2a DNA Tc2 51 378 -366 5776 97 41 12 chr5 80222652 80223918 -122861614 + L1PA14 LINE L1 4868 6158 -3 1985 152 73 44 chr5 80224005 80224049 -122861483 - MSTC LTR MaLR -7 421 380 2050 111 31 3 chr5 80224049 80224337 -122861195 - AluSx SINE Alu -16 296 1 1985 152 73 44 chr5 80224337 80224701 -122860831 - MSTC LTR MaLR -48 380 1 2353 100 0 0 chr5 80224750 80225051 -122860481 + AluSq SINE Alu 1 301 -12 29 0 0 0 chr5 80225654 80225683 -122859849 + GC_rich Low_complexity Low_complexity 1 29 0 2538 57 0 0 chr5 80226996 80227294 -122858238 + AluY SINE Alu 1 298 -13 962 151 0 35 chr5 80227614 80227786 -122857746 - FRAM SINE Alu -11 165 1 290 293 90 38 chr5 80227836 80227969 -122857563 + MER91A DNA MER1_type 50 189 -7 2265 122 3 0 chr5 80228169 80228472 -122857060 - AluSx SINE Alu -8 304 1 195 139 0 0 chr5 80228772 80228808 -122856724 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 1531 178 20 38 chr5 80228808 80228981 -122856551 - AluJo SINE Alu -24 288 114 2227 115 7 0 chr5 80228981 80229285 -122856247 + AluSq SINE Alu 1 306 -7 2264 98 3 7 chr5 80229285 80229580 -122855952 + AluSp SINE Alu 1 295 -18 1531 178 20 38 chr5 80229580 80229698 -122855834 - AluJo SINE Alu -196 116 1 806 170 0 28 chr5 80229909 80230050 -122855482 + AluJ SINE Alu 5 141 -171 1173 125 0 18 chr5 80230098 80230266 -122855266 + AluJ SINE Alu 145 309 -3 1411 139 171 19 chr5 80230453 80230711 -122854821 + AluJo SINE Alu 1 297 -15 21 0 0 0 chr5 80230779 80230800 -122854732 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 80231732 80231770 -122853762 + AT_rich Low_complexity Low_complexity 1 38 0 1439 172 75 0 chr5 80231802 80231962 -122853570 - AluJo SINE Alu -12 300 153 207 0 0 0 chr5 80231962 80231985 -122853547 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1439 172 75 0 chr5 80231985 80232103 -122853429 - AluJo SINE Alu -159 153 1 24 32 0 0 chr5 80232103 80232134 -122853398 + AT_rich Low_complexity Low_complexity 1 31 0 865 142 0 8 chr5 80232134 80232268 -122853264 - FLAM_C SINE Alu -10 133 1 2359 103 0 13 chr5 80232552 80232864 -122852668 + AluSx SINE Alu 1 308 -4 204 283 94 19 chr5 80233365 80233471 -122852061 - MIR SINE MIR -28 234 121 1436 128 132 14 chr5 80233510 80233791 -122851741 + MER44D DNA MER2_type 18 601 -8 241 343 80 55 chr5 80234062 80234263 -122851269 + L2 LINE L2 1168 1373 -1941 271 259 12 12 chr5 80235656 80235737 -122849795 - L2 LINE L2 -62 3251 3171 551 305 16 5 chr5 80235941 80236131 -122849401 - MLT1I LTR MaLR 0 409 218 540 221 71 0 chr5 80236179 80236306 -122849226 + L2 LINE L2 3161 3296 -17 433 317 107 49 chr5 80236444 80236892 -122848640 - L2 LINE L2 -31 3282 2809 378 75 0 0 chr5 80236894 80236947 -122848585 + MADE1 DNA Mariner 1 53 -27 990 303 194 19 chr5 80236947 80237426 -122848106 - L2 LINE L2 -531 2783 2389 898 201 107 63 chr5 80237426 80237745 -122847787 + MER46C DNA MER2_type 4 336 -2 990 303 194 19 chr5 80237745 80238040 -122847492 - L2 LINE L2 -925 2389 1874 1792 149 30 20 chr5 80238317 80238619 -122846913 - AluJb SINE Alu -2 310 6 6170 135 50 36 chr5 80239292 80239385 -122846147 - Tigger3b DNA MER2_type -1798 1230 1140 2231 136 3 0 chr5 80239385 80239693 -122845839 + AluSx SINE Alu 1 309 -3 6170 135 50 36 chr5 80239693 80240419 -122845113 - Tigger3b DNA MER2_type -1888 1140 386 2090 135 3 0 chr5 80240419 80240716 -122844816 + AluSx SINE Alu 1 298 -14 6170 135 50 36 chr5 80240716 80241107 -122844425 - Tigger3b DNA MER2_type -2642 386 2 2362 87 7 0 chr5 80241131 80241429 -122844103 + AluSc SINE Alu 1 300 -9 316 188 29 0 chr5 80242390 80242459 -122843073 + MER103 DNA DNA 9 79 -87 2056 102 3 61 chr5 80242461 80242774 -122842758 - AluSg SINE Alu -15 295 1 2381 91 0 3 chr5 80243069 80243376 -122842156 - AluSg SINE Alu -2 308 3 2330 83 10 0 chr5 80243588 80243888 -122841644 + AluY SINE Alu 1 303 -8 2096 100 0 0 chr5 80244056 80244327 -122841205 - AluSx SINE Alu -13 299 29 944 143 0 0 chr5 80244959 80245092 -122840440 + AluJ SINE Alu 1 133 -179 46 101 0 0 chr5 80245092 80245250 -122840282 + AT_rich Low_complexity Low_complexity 1 158 0 82 78 0 0 chr5 80245383 80245563 -122839969 + AT_rich Low_complexity Low_complexity 1 180 0 761 142 92 21 chr5 80245563 80245704 -122839828 + AluJ SINE Alu 129 279 -33 344 259 9 56 chr5 80246588 80246696 -122838836 - L2 LINE L2 -4 3309 3207 2188 116 17 0 chr5 80248083 80248377 -122837155 + AluSx SINE Alu 1 299 -13 561 285 108 14 chr5 80250681 80250895 -122834637 - MIR SINE MIR 0 262 29 520 296 114 45 chr5 80251503 80251905 -122833627 - MLT1K LTR MaLR -12 576 147 2271 112 7 0 chr5 80252239 80252534 -122832998 + AluSq SINE Alu 1 297 -16 1853 199 0 6 chr5 80252869 80253181 -122832351 - AluJo SINE Alu -2 310 1 507 204 68 23 chr5 80253225 80253248 -122832284 + MIR SINE MIR 67 87 -175 2232 97 3 3 chr5 80253248 80253556 -122831976 - AluSg SINE Alu -2 308 1 507 204 68 23 chr5 80253556 80253664 -122831868 + MIR SINE MIR 87 204 -58 1271 129 0 10 chr5 80254017 80254195 -122831337 - AluSq SINE Alu -2 311 134 2389 99 0 0 chr5 80254195 80254498 -122831034 - AluSq SINE Alu -10 303 1 1271 129 0 10 chr5 80254498 80254512 -122831020 - AluSq SINE Alu -179 134 121 408 133 0 0 chr5 80254833 80254893 -122830639 + AluS SINE Alu 1 60 -258 269 267 35 35 chr5 80254893 80254979 -122830553 - L2 LINE L2 -623 2691 2606 2203 105 0 30 chr5 80254998 80255302 -122830230 + AluSq SINE Alu 1 295 -18 2111 141 0 3 chr5 80255505 80255811 -122829721 - AluSx SINE Alu -7 305 1 243 79 0 0 chr5 80255819 80255857 -122829675 + (T)n Simple_repeat Simple_repeat 1 38 0 603 180 34 48 chr5 80256164 80256370 -122829162 - L1M4 LINE L1 -920 5226 5024 * 635 187 7 7 chr5 80256368 80256523 -122829009 + L1MD3 LINE L1 6902 7056 -939 3087 195 64 47 chr5 80256562 80256735 -122828797 + L1ME1 LINE L1 5314 5483 -851 1700 172 14 10 chr5 80256735 80257031 -122828501 + AluJb SINE Alu 1 297 -15 3087 195 64 47 chr5 80257031 80257463 -122828069 + L1ME1 LINE L1 5483 5906 -428 2271 99 10 3 chr5 80257463 80257765 -122827767 - AluSg SINE Alu -6 304 1 3087 195 64 47 chr5 80257765 80258006 -122827526 + L1ME1 LINE L1 5906 6332 -2 281 216 54 40 chr5 80258006 80258080 -122827452 - L2 LINE L2 -843 2471 2397 2336 173 19 7 chr5 80258352 80258773 -122826759 - MSTB LTR MaLR 0 426 1 2265 123 0 0 chr5 80258851 80259161 -122826371 - AluSx SINE Alu -2 310 1 316 241 103 0 chr5 80259162 80259249 -122826283 - MER5B DNA MER1_type -78 100 5 * 400 259 163 48 chr5 80259244 80259391 -122826141 + MER5A DNA MER1_type 26 189 0 962 194 44 6 chr5 80259439 80259619 -122825913 + MER5A DNA MER1_type 3 189 0 300 151 151 92 chr5 80259676 80259795 -122825737 + L1MC4 LINE L1 7812 7937 -105 28 0 0 0 chr5 80261139 80261167 -122824365 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 80262451 80262473 -122823059 + AT_rich Low_complexity Low_complexity 1 22 0 182 235 0 59 chr5 80262884 80262935 -122822597 + MIR SINE MIR 38 85 -123 400 256 91 50 chr5 80262944 80263065 -122822467 - L2 LINE L2 0 3313 3188 27 49 0 0 chr5 80263386 80263427 -122822105 + AT_rich Low_complexity Low_complexity 1 41 0 2003 140 3 7 chr5 80263954 80264254 -122821278 + AluJb SINE Alu 1 299 -13 232 217 117 0 chr5 80264259 80264319 -122821213 + MIR3 SINE MIR 119 185 -23 1864 176 3 0 chr5 80264325 80264620 -122820912 - AluJb SINE Alu -16 296 1 2047 119 3 10 chr5 80264669 80264964 -122820568 - AluSx SINE Alu -19 293 1 2051 152 0 13 chr5 80265178 80265494 -122820038 - AluJb SINE Alu 0 312 1 2166 93 7 13 chr5 80266576 80266877 -122818655 - AluSq SINE Alu -14 299 1 24 0 0 0 chr5 80266889 80266913 -122818619 + AT_rich Low_complexity Low_complexity 1 24 0 558 232 38 103 chr5 80266984 80267169 -122818363 + MER5B DNA MER1_type 6 178 0 2118 131 0 13 chr5 80268465 80268779 -122816753 + AluSx SINE Alu 1 310 -2 1352 159 22 0 chr5 80268997 80269224 -122816308 - MER46A DNA MER2_type -4 232 1 1578 171 16 33 chr5 80271747 80272051 -122813481 - AluJo SINE Alu -13 299 1 344 324 14 14 chr5 80272069 80272211 -122813321 + L1MC4a LINE L1 5524 5665 -2143 240 35 0 0 chr5 80272217 80272246 -122813286 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 267 0 17 chr5 80272255 80272315 -122813217 + (TA)n Simple_repeat Simple_repeat 2 60 0 344 263 150 6 chr5 80272328 80272502 -122813030 + L1MC4a LINE L1 5659 5778 -464 1071 195 0 35 chr5 80272674 80272716 -122812816 - AluJb SINE Alu -11 301 259 2055 143 141 5 chr5 80272716 80273093 -122812439 + MSTA LTR MaLR 1 428 0 1071 195 0 35 chr5 80273093 80273276 -122812256 - AluJb SINE Alu -53 259 84 21 0 0 0 chr5 80273420 80273441 -122812091 + AT_rich Low_complexity Low_complexity 1 21 0 255 125 0 0 chr5 80273485 80273525 -122812007 + (T)n Simple_repeat Simple_repeat 1 40 0 2489 204 51 16 chr5 80273853 80274423 -122811109 - L1MD1 LINE L1 -1 6241 5652 1084 198 66 16 chr5 80274409 80274844 -122810688 - L1MDa LINE L1 -3748 2792 2341 * 345 235 8 84 chr5 80274834 80274880 -122810652 - L1MDa LINE L1 -5941 589 541 * 1656 180 0 20 chr5 80274880 80275186 -122810346 - AluJo SINE Alu -12 300 1 345 235 8 84 chr5 80275186 80275258 -122810274 - L1MDa LINE L1 -5989 541 480 501 212 123 85 chr5 80275880 80276116 -122809416 - L1MC4 LINE L1 -5 8037 7793 809 203 35 50 chr5 80276151 80276412 -122809120 - L1MC4a LINE L1 -1755 6053 5797 1207 190 92 74 chr5 80276412 80276647 -122808885 + MER2 DNA MER2_type 2 231 -114 1425 185 11 28 chr5 80276647 80276961 -122808571 - AluJb SINE Alu 0 309 1 1207 190 92 74 chr5 80276961 80276988 -122808544 + MER2 DNA MER2_type 231 256 -89 1842 159 17 0 chr5 80276988 80277290 -122808242 + AluSx SINE Alu 2 308 -4 1207 190 92 74 chr5 80277290 80277361 -122808171 + MER2 DNA MER2_type 256 344 -1 1218 244 64 11 chr5 80277365 80277690 -122807842 - L1MC4a LINE L1 -2013 5795 5448 2797 3 0 0 chr5 80277690 80277995 -122807537 - AluY SINE Alu -6 305 1 1218 244 64 11 chr5 80277995 80278026 -122807506 - L1MC4a LINE L1 -2360 5448 5420 333 159 0 0 chr5 80278674 80278737 -122806795 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 302 29 0 0 chr5 80278871 80278906 -122806626 - U2 snRNA snRNA -153 35 1 526 184 64 100 chr5 80279036 80279113 -122806419 - L1MC5 LINE L1 -424 7537 7459 477 0 0 0 chr5 80279113 80279166 -122806366 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 2013 120 4 0 chr5 80279167 80279443 -122806089 - AluSc SINE Alu -32 277 1 526 184 64 100 chr5 80279443 80279613 -122805919 - L1MC5 LINE L1 -501 7460 7297 24 0 0 0 chr5 80280320 80280344 -122805188 + AT_rich Low_complexity Low_complexity 1 24 0 1986 125 3 22 chr5 80280385 80280696 -122804836 - AluSx SINE Alu -7 305 1 1969 143 0 0 chr5 80280748 80281049 -122804483 - AluY SINE Alu -10 301 1 26 50 0 0 chr5 80281673 80281713 -122803819 + AT_rich Low_complexity Low_complexity 1 40 0 2209 91 0 3 chr5 80282240 80282538 -122802994 + AluY SINE Alu 1 297 -14 236 198 47 66 chr5 80282657 80282763 -122802769 + L1ME4a LINE L1 6014 6117 -4 23 33 0 0 chr5 80283748 80283778 -122801754 + AT_rich Low_complexity Low_complexity 1 30 0 1906 149 53 3 chr5 80284962 80285283 -122800249 - L1MC1 LINE L1 -5 6328 5992 1157 198 123 0 chr5 80285785 80286053 -122799479 - AluJb SINE Alu -1 301 1 1601 179 14 14 chr5 80286847 80287138 -122798394 - AluJo SINE Alu -21 291 1 24 53 0 0 chr5 80287353 80287391 -122798141 + AT_rich Low_complexity Low_complexity 1 38 0 519 330 29 19 chr5 80288223 80288429 -122797103 - MIR SINE MIR -34 228 21 191 314 0 43 chr5 80293241 80293311 -122792221 - MIR3 SINE MIR -27 181 115 194 352 97 35 chr5 80293611 80293838 -122791694 + L2 LINE L2 2818 3058 -214 509 227 23 0 chr5 80294233 80294361 -122791171 - L1ME4a LINE L1 0 6121 5991 405 238 177 18 chr5 80294422 80294586 -122790946 + MIR SINE MIR 69 258 -4 1940 144 6 0 chr5 80294686 80294998 -122790534 - L1PB4 LINE L1 -3 6153 5840 397 330 94 0 chr5 80295293 80295517 -122790015 - L1ME LINE L1 -366 5755 5511 723 209 50 11 chr5 80295649 80295831 -122789701 + MER5A DNA MER1_type 1 189 0 920 163 163 12 chr5 80295839 80296096 -122789436 - MER33 DNA MER1_type 0 324 29 361 270 56 0 chr5 80296589 80296678 -122788854 + L2 LINE L2 3208 3301 -12 3201 111 68 18 chr5 80298161 80298664 -122786868 - MER1A DNA MER1_type -1 528 1 742 155 161 0 chr5 80298962 80299123 -122786409 + MER5A DNA MER1_type 1 187 -2 807 219 6 19 chr5 80300972 80301132 -122784400 - FRAM SINE Alu -17 159 2 3831 139 48 9 chr5 80301190 80301859 -122783673 + L1MB3 LINE L1 5488 6182 -1 21 0 0 0 chr5 80302009 80302030 -122783502 + AT_rich Low_complexity Low_complexity 1 21 0 186 226 0 81 chr5 80302441 80302503 -122783029 + L2 LINE L2 3214 3270 -2 22 56 0 0 chr5 80302833 80302869 -122782663 + AT_rich Low_complexity Low_complexity 1 36 0 3331 261 166 35 chr5 80303975 80305824 -122779708 - L2 LINE L2 -3 3310 1217 424 264 52 62 chr5 80305826 80306019 -122779513 - L2 LINE L2 -2791 523 333 28 29 0 0 chr5 80306097 80306132 -122779400 + AT_rich Low_complexity Low_complexity 1 35 0 1793 139 0 65 chr5 80306489 80306799 -122778733 + AluJb SINE Alu 2 291 -21 23 33 0 0 chr5 80307086 80307116 -122778416 + AT_rich Low_complexity Low_complexity 1 30 0 265 297 34 17 chr5 80307269 80307387 -122778145 + L1ME LINE L1 3726 3845 -2301 312 317 100 36 chr5 80307417 80307698 -122777834 + L1ME LINE L1 3922 4220 -1926 824 213 0 19 chr5 80308044 80308204 -122777328 - FRAM SINE Alu -9 157 1 226 310 53 40 chr5 80308253 80308479 -122777053 + L1ME LINE L1 4735 4963 -1183 1113 231 4 21 chr5 80308585 80308828 -122776704 - MER8 DNA MER2_type 0 239 1 322 297 184 17 chr5 80309127 80309420 -122776112 + L1ME LINE L1 5383 5724 -397 1659 186 3 0 chr5 80309769 80310054 -122775478 + AluJo SINE Alu 1 286 -26 220 310 47 58 chr5 80310055 80310226 -122775306 - L2 LINE L2 -149 3164 2996 297 362 40 11 chr5 80310384 80310558 -122774974 - MER5A DNA MER1_type -4 185 7 26 50 0 0 chr5 80311201 80311241 -122774291 + AT_rich Low_complexity Low_complexity 1 40 0 210 244 0 22 chr5 80311626 80311671 -122773861 - L2 LINE L2 -18 3295 3252 2157 104 0 39 chr5 80311817 80312124 -122773408 - AluSc SINE Alu -14 295 1 244 65 0 0 chr5 80312127 80312158 -122773374 - U2 snRNA snRNA -1 187 157 2150 123 0 3 chr5 80312552 80312853 -122772679 + AluSx SINE Alu 3 302 -10 2157 108 0 14 chr5 80313181 80313506 -122772026 - AluSx SINE Alu 0 312 1 2158 97 17 0 chr5 80314010 80314298 -122771234 + AluSc SINE Alu 1 293 -16 1834 165 0 0 chr5 80314434 80314719 -122770813 + AluSx SINE Alu 1 285 -27 283 178 0 0 chr5 80314674 80314719 -122770813 + Alu SINE Alu 241 335 0 451 0 0 0 chr5 80314719 80314769 -122770763 + (TAAA)n Simple_repeat Simple_repeat 2 160 0 2363 89 3 7 chr5 80314784 80315086 -122770446 + AluSg SINE Alu 1 301 -9 195 214 18 0 chr5 80315414 80315470 -122770062 + L2 LINE L2 2425 2481 -833 213 306 116 27 chr5 80315708 80315855 -122769677 + L2 LINE L2 2807 2966 -306 28 29 0 0 chr5 80319660 80319695 -122765837 + AT_rich Low_complexity Low_complexity 1 35 0 1950 152 0 3 chr5 80319882 80320179 -122765353 + AluSx SINE Alu 1 296 -16 948 247 99 14 chr5 80320353 80320700 -122764832 - MLT1J2 LTR MaLR -50 396 3 26 0 0 0 chr5 80320830 80320856 -122764676 + AT_rich Low_complexity Low_complexity 1 26 0 249 196 71 0 chr5 80320943 80320999 -122764533 - MLT1L LTR MaLR -2 613 554 2241 137 9 18 chr5 80320999 80321341 -122764191 - MER1B DNA MER1_type 0 339 1 392 259 116 58 chr5 80321823 80322142 -122763390 + L1MC4a LINE L1 5539 5727 -394 2141 102 31 17 chr5 80322171 80322464 -122763068 + AluSx SINE Alu 1 297 -15 203 0 37 0 chr5 80322744 80322771 -122762761 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1853 163 7 3 chr5 80322926 80323220 -122762312 + AluSx SINE Alu 1 295 -17 229 152 0 0 chr5 80323905 80323938 -122761594 + Tigger3b DNA MER2_type 31 63 -1168 22 0 0 0 chr5 80324321 80324343 -122761189 + AT_rich Low_complexity Low_complexity 1 22 0 1560 178 42 11 chr5 80324686 80324973 -122760559 - AluJo SINE Alu -16 296 1 198 0 0 0 chr5 80325155 80325177 -122760355 + (A)n Simple_repeat Simple_repeat 1 22 0 796 226 62 4 chr5 80327511 80327737 -122757795 - Charlie2 DNA MER1_type 0 2862 2624 759 218 28 51 chr5 80327822 80327976 -122757556 - MER101 LTR ERV1 0 474 325 1666 182 30 3 chr5 80327976 80328272 -122757260 + AluJo SINE Alu 1 304 -8 759 218 28 51 chr5 80328272 80328333 -122757199 - MER101 LTR ERV1 -149 325 264 1980 142 0 3 chr5 80328333 80328644 -122756888 - AluSx SINE Alu -2 310 1 2096 126 0 3 chr5 80328646 80328940 -122756592 - AluSx SINE Alu -19 293 1 745 94 19 0 chr5 80329009 80329115 -122756417 + HY1 scRNA scRNA 1 108 -4 222 250 0 0 chr5 80329116 80329164 -122756368 + A-rich Low_complexity Low_complexity 1 48 0 916 138 30 18 chr5 80329225 80329392 -122756140 - MER101 LTR ERV1 -296 178 10 1649 187 118 52 chr5 80330070 80330663 -122754869 - Charlie2 DNA MER1_type -304 2558 1927 5011 123 62 19 chr5 80330669 80331209 -122754323 - Tigger3b DNA MER2_type -1797 1231 716 1606 206 3 16 chr5 80331209 80331525 -122754007 + AluJb SINE Alu 1 312 0 5011 123 62 19 chr5 80331525 80331557 -122753975 - Tigger3b DNA MER2_type -2312 716 687 2273 84 7 0 chr5 80331557 80331843 -122753689 + AluSc SINE Alu 1 288 -21 5011 123 62 19 chr5 80331843 80332123 -122753409 - Tigger3b DNA MER2_type -2341 687 341 779 120 0 53 chr5 80332123 80332256 -122753276 - FLAM_C SINE Alu -4 139 14 1594 126 8 148 chr5 80332258 80332353 -122753179 - Tigger3b DNA MER2_type -885 346 239 4419 132 42 9 chr5 80332353 80333052 -122752480 + MER72 LTR ERV1 1 722 0 1594 126 8 148 chr5 80333052 80333328 -122752204 - Tigger3b DNA MER2_type -992 239 27 228 241 0 0 chr5 80333364 80333418 -122752114 - Charlie2 DNA MER1_type -941 1921 1868 235 208 38 0 chr5 80333424 80333477 -122752055 - Charlie2 DNA MER1_type -2535 327 273 376 265 76 0 chr5 80333541 80333673 -122751859 - Charlie2 DNA MER1_type -2720 142 1 1016 210 137 111 chr5 80334050 80334163 -122751369 - MER34B LTR ERV1 -12 553 444 1786 165 7 3 chr5 80334163 80334448 -122751084 - AluJb SINE Alu -26 286 1 1016 210 137 111 chr5 80334448 80334873 -122750659 - MER34B LTR ERV1 -121 444 1 9614 192 36 46 chr5 80334878 80335018 -122750514 - L1MB3 LINE L1 -30 6389 6249 1691 147 13 70 chr5 80335018 80335332 -122750200 + AluJb SINE Alu 14 309 -3 9614 192 36 46 chr5 80335332 80336295 -122749237 - L1MB3 LINE L1 -170 6249 5278 2217 116 3 0 chr5 80336295 80336597 -122748935 + AluSx SINE Alu 5 307 -5 9614 192 36 46 chr5 80336597 80338905 -122746627 - L1MB3 LINE L1 -1141 5278 3006 1421 171 30 30 chr5 80338913 80339176 -122746356 - AluJo SINE Alu -16 296 34 3575 161 20 67 chr5 80339185 80340389 -122745143 - L1MB3 LINE L1 -3379 3003 1830 269 128 0 0 chr5 80340386 80340425 -122745107 - L1MB3 LINE L1 -5094 1290 1252 * 1302 182 12 25 chr5 80340424 80340666 -122744866 - L1MB3 LINE L1 -6141 243 5 1311 161 26 145 chr5 80340687 80341073 -122744459 + MER58B DNA MER1_type 1 340 -1 2695 122 21 23 chr5 80342037 80342470 -122743062 - MSTB1 LTR MaLR 0 432 1 295 299 147 11 chr5 80342820 80342997 -122742535 + MIR SINE MIR 61 261 -1 549 250 31 19 chr5 80344298 80344458 -122741074 - MIR SINE MIR -53 209 48 1621 232 121 42 chr5 80345649 80346308 -122739224 + L2 LINE L2 2265 2975 -339 1838 193 184 11 chr5 80346329 80346801 -122738731 + MLT1F1 LTR MaLR 14 567 0 444 289 94 5 chr5 80346801 80347002 -122738530 + L2 LINE L2 2991 3209 -104 218 132 0 113 chr5 80347951 80348004 -122737528 + MIR SINE MIR 98 144 -64 25 31 0 0 chr5 80349404 80349436 -122736096 + GC_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 80349476 80349498 -122736034 + GC_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 80349673 80349716 -122735816 + GC_rich Low_complexity Low_complexity 1 43 0 433 230 40 10 chr5 80350374 80350474 -122735058 + Tigger7 DNA MER2_type 2385 2487 0 216 0 0 0 chr5 80351370 80351394 -122734138 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1836 139 26 0 chr5 80351395 80351668 -122733864 - AluJo SINE Alu -32 280 1 337 223 144 0 chr5 80353391 80353530 -122732002 + MIR3 SINE MIR 43 201 -7 22 56 0 0 chr5 80354139 80354175 -122731357 + AT_rich Low_complexity Low_complexity 1 36 0 580 249 17 91 chr5 80354205 80354446 -122731086 - MIR SINE MIR -1 261 39 189 0 0 0 chr5 80356354 80356375 -122729157 + (TA)n Simple_repeat Simple_repeat 2 22 0 2147 100 0 28 chr5 80356398 80356712 -122728820 - AluSx SINE Alu 0 306 1 1963 149 0 13 chr5 80356712 80357012 -122728520 - AluJo SINE Alu -15 297 1 820 177 30 61 chr5 80357013 80357211 -122728321 - L1MB4 LINE L1 -45 6135 5944 1572 152 0 0 chr5 80357776 80358006 -122727526 + AluSq SINE Alu 2 231 -82 2551 123 50 0 chr5 80358006 80358542 -122726990 - MER51A LTR ERV1 0 634 1 478 125 0 0 chr5 80358542 80358614 -122726918 + AluS SINE Alu 228 299 -13 513 268 45 35 chr5 80359883 80360081 -122725451 - MIR SINE MIR -54 208 9 216 0 0 0 chr5 80360190 80360214 -122725318 + (TG)n Simple_repeat Simple_repeat 2 25 0 32 0 0 0 chr5 80360735 80360767 -122724765 + AT_rich Low_complexity Low_complexity 1 32 0 354 312 43 0 chr5 80361018 80361156 -122724376 - MIR SINE MIR -87 175 32 232 194 0 42 chr5 80361293 80361365 -122724167 + CT-rich Low_complexity Low_complexity 4 72 0 1655 157 4 11 chr5 80362581 80362848 -122722684 - AluJo SINE Alu -26 286 22 3842 173 55 11 chr5 80362916 80363655 -122721877 - L1MB5 LINE L1 -31 6143 5372 2981 177 14 58 chr5 80365914 80366553 -122718979 - LTR9 LTR ERV1 -1 611 1 252 182 0 0 chr5 80367581 80367625 -122717907 + Tigger1 DNA MER2_type 1986 2029 -389 1982 125 54 0 chr5 80367654 80367933 -122717599 + AluSx SINE Alu 1 294 -18 26 30 0 0 chr5 80368107 80368140 -122717392 + AT_rich Low_complexity Low_complexity 1 33 0 464 99 28 0 chr5 80368161 80368232 -122717300 + MLT2B2 LTR ERVL 1 73 -442 569 216 15 30 chr5 80368232 80368366 -122717166 + FLAM_A SINE Alu 11 142 0 1979 176 65 47 chr5 80368395 80368785 -122716747 + MLT2B2 LTR ERVL 60 460 -55 309 26 0 0 chr5 80368785 80368823 -122716709 + (CA)n Simple_repeat Simple_repeat 2 39 0 1979 176 65 47 chr5 80368823 80368880 -122716652 + MLT2B2 LTR ERVL 460 515 0 630 222 0 57 chr5 80368898 80369074 -122716458 - L1MC4 LINE L1 -150 7892 7727 995 140 0 0 chr5 80369093 80369236 -122716296 - AluSg/x SINE Alu -35 275 133 1745 132 106 7 chr5 80369267 80369540 -122715992 - AluSg SINE Alu -10 300 1 253 304 0 33 chr5 80369881 80369973 -122715559 - L1MC4 LINE L1 -753 7289 7201 1721 161 51 54 chr5 80370108 80370499 -122715033 - MLT1B LTR MaLR 0 390 1 797 239 185 54 chr5 80370627 80370955 -122714577 - L1MC4 LINE L1 -887 6921 6637 2590 119 40 21 chr5 80370955 80371375 -122714157 - MSTA LTR MaLR 0 428 1 797 239 185 54 chr5 80371375 80371857 -122713675 - L1MC4 LINE L1 -1171 6637 6047 212 86 29 0 chr5 80371864 80371899 -122713633 + (CA)n Simple_repeat Simple_repeat 2 37 0 2220 253 33 23 chr5 80371901 80372506 -122713026 - L1MC4 LINE L1 -1903 5905 5295 2126 213 75 35 chr5 80373185 80373399 -122712133 - MLT1F1 LTR MaLR 0 567 363 2315 158 3 6 chr5 80373399 80373765 -122711767 + MLT1A1 LTR MaLR 1 365 0 2126 213 75 35 chr5 80373765 80374095 -122711437 - MLT1F1 LTR MaLR -204 363 1 305 226 75 11 chr5 80374335 80374428 -122711104 - MER5A DNA MER1_type -47 142 44 381 291 31 0 chr5 80374706 80374833 -122710699 + L1MC5 LINE L1 7269 7399 -562 849 261 62 0 chr5 80374926 80375137 -122710395 + MER58A DNA MER1_type 1 224 0 890 308 70 52 chr5 80375163 80375497 -122710035 + L1ME1 LINE L1 38 364 -6032 1698 158 53 0 chr5 80375497 80375781 -122709751 + AluSx SINE Alu 1 299 -13 890 308 70 52 chr5 80375781 80376155 -122709377 + L1ME1 LINE L1 364 759 -5637 1843 162 3 19 chr5 80376159 80376467 -122709065 + AluJo SINE Alu 1 303 -9 231 152 65 0 chr5 80376505 80376551 -122708981 - L1M4 LINE L1 -2192 3954 3906 2908 215 140 45 chr5 80376554 80377677 -122707855 + L1ME1 LINE L1 4085 5100 -1135 2076 122 3 19 chr5 80377677 80377988 -122707544 + AluSq SINE Alu 1 306 -7 2908 215 140 45 chr5 80377988 80378045 -122707487 + L1ME1 LINE L1 5100 5150 -1085 432 0 0 0 chr5 80378045 80378093 -122707439 + (TA)n Simple_repeat Simple_repeat 2 49 0 2908 215 140 45 chr5 80378093 80378881 -122706651 + L1ME1 LINE L1 5150 6235 0 704 277 103 45 chr5 80378873 80379310 -122706222 + L1MC4 LINE L1 7489 8014 -28 * 2174 197 69 64 chr5 80381953 80382562 -122702970 - LTR9 LTR ERV1 0 612 1 519 261 0 0 chr5 80383041 80383152 -122702380 - MER81 DNA DNA -1 113 3 341 281 96 44 chr5 80383406 80383541 -122701991 + MIR3 SINE MIR 17 158 -50 497 96 29 29 chr5 80383664 80383768 -122701764 + CT-rich Low_complexity Low_complexity 2 105 0 586 246 171 0 chr5 80385480 80385691 -122699841 - MIR SINE MIR 0 262 16 234 0 0 0 chr5 80385711 80385737 -122699795 + (CA)n Simple_repeat Simple_repeat 1 26 0 225 217 8 150 chr5 80385796 80385900 -122699632 - MIR3 SINE MIR -9 199 112 982 181 33 0 chr5 80385900 80386082 -122699450 - MER5A DNA MER1_type -1 188 1 225 217 8 150 chr5 80386082 80386097 -122699435 - MIR3 SINE MIR -96 112 97 1086 214 99 12 chr5 80386388 80386804 -122698728 + MLT1E2 LTR MaLR 136 549 0 2162 162 94 0 chr5 80386974 80387369 -122698163 - MSTB1 LTR MaLR 0 432 1 1695 174 13 17 chr5 80387720 80388018 -122697514 - AluJo SINE Alu -13 299 3 945 275 195 33 chr5 80389735 80390247 -122695285 + MLT1G1 LTR MaLR 1 595 0 617 284 59 72 chr5 80390337 80390794 -122694738 - L1MC4a LINE L1 -1887 5921 5471 2035 139 0 7 chr5 80391017 80391312 -122694220 - AluSx SINE Alu -19 293 1 22 35 0 0 chr5 80391817 80391846 -122693686 + AT_rich Low_complexity Low_complexity 1 29 0 477 84 0 0 chr5 80391861 80391932 -122693600 - AluSx SINE Alu 0 309 239 1469 115 0 5 chr5 80391934 80392134 -122693398 - AluSx SINE Alu -113 199 1 2304 117 0 22 chr5 80392648 80392965 -122692567 - AluSx SINE Alu -2 310 1 394 263 37 45 chr5 80394051 80394208 -122691324 - MER5A DNA MER1_type -1 188 23 1240 211 223 5 chr5 80394567 80395121 -122690411 - LTR50 LTR ERVL -4 625 2 2151 288 70 22 chr5 80395355 80396136 -122689396 - ERVL LTR ERVL -240 5524 4706 1203 320 20 14 chr5 80396148 80396588 -122688944 + LTR16A LTR ERVL 1 443 -7 4264 291 61 19 chr5 80396603 80398039 -122687493 - ERVL LTR ERVL -1076 4688 3193 275 106 0 43 chr5 80398043 80398090 -122687442 - MLT2B1 LTR ERVL -8 512 468 2638 150 22 24 chr5 80398091 80398450 -122687082 - LTR47A LTR ERVL 0 452 93 1600 42 0 0 chr5 80398450 80398643 -122686889 - L1PA4 LINE L1 -3 6152 5960 2638 150 22 24 chr5 80398643 80398736 -122686796 - LTR47A LTR ERVL -359 93 1 322 256 70 39 chr5 80398775 80398904 -122686628 - ERVL LTR ERVL -5279 485 353 1571 217 313 8 chr5 80399217 80399825 -122685707 - LTR50 LTR ERVL -2 793 1 235 325 0 0 chr5 80399844 80399927 -122685605 + MIR SINE MIR 170 252 -10 614 216 85 20 chr5 80399938 80400091 -122685441 - L1M4 LINE L1 -2236 3910 3748 1508 171 7 11 chr5 80401634 80401903 -122683629 + AluJo SINE Alu 45 312 0 213 247 19 143 chr5 80405035 80405189 -122680343 - L2 LINE L2 -1 3271 3137 2269 128 3 0 chr5 80406265 80406577 -122678955 - AluSp SINE Alu 0 313 1 1419 57 0 0 chr5 80407080 80407255 -122678277 - Tigger1 DNA MER2_type -1437 981 807 15674 121 19 15 chr5 80407693 80409956 -122675576 + Tigger1 DNA MER2_type 24 2300 -118 2106 113 14 0 chr5 80409956 80410238 -122675294 - AluSx SINE Alu -26 286 1 15674 121 19 15 chr5 80410238 80410357 -122675175 + Tigger1 DNA MER2_type 2300 2417 -1 1006 192 33 63 chr5 80410361 80410695 -122674837 - L1MC5 LINE L1 -87 7874 7551 683 182 0 131 chr5 80412796 80413025 -122672507 + Charlie1a DNA MER1_type 1 199 -1256 1639 169 136 79 chr5 80413070 80413460 -122672072 + MLT1D LTR MaLR 23 444 -61 2194 13 0 0 chr5 80413460 80413697 -122671835 - AluYa5 SINE Alu 0 311 75 1639 169 136 79 chr5 80413697 80413763 -122671769 + MLT1D LTR MaLR 444 505 0 5724 189 43 31 chr5 80413764 80415007 -122670525 + Charlie1a DNA MER1_type 196 1453 -2 818 266 38 89 chr5 80415047 80415472 -122670060 + MLT1J LTR MaLR 100 502 -9 22 35 0 0 chr5 80415567 80415596 -122669936 + AT_rich Low_complexity Low_complexity 1 29 0 434 90 0 0 chr5 80415612 80415679 -122669853 - Alu SINE Alu 0 310 244 1632 112 158 4 chr5 80415623 80415883 -122669649 - AluSx SINE Alu -1 301 2 347 181 0 64 chr5 80416023 80416117 -122669415 + MLT1J LTR MaLR 415 502 -9 290 268 0 0 chr5 80417137 80417208 -122668324 + MIR SINE MIR 48 118 -144 1486 87 111 0 chr5 80417231 80417334 -122668198 + MER30 DNA MER1_type 1 91 -139 261 0 0 0 chr5 80417334 80417363 -122668169 + (CA)n Simple_repeat Simple_repeat 2 30 0 1486 87 111 0 chr5 80417363 80417466 -122668066 + MER30 DNA MER1_type 91 230 0 1678 152 47 0 chr5 80417763 80418039 -122667493 - AluSx SINE Alu -23 289 1 511 334 76 9 chr5 80418044 80418373 -122667159 - L1MEc LINE L1 -6008 388 38 866 256 62 0 chr5 80418399 80418610 -122666922 - MER58A DNA MER1_type 0 224 1 381 291 31 0 chr5 80418703 80418830 -122666702 - L1MC5 LINE L1 -562 7399 7269 326 234 64 11 chr5 80419108 80419202 -122666330 + MER5A DNA MER1_type 44 142 -47 2126 213 75 35 chr5 80419442 80419772 -122665760 + MLT1F1 LTR MaLR 1 363 -204 2315 158 3 6 chr5 80419772 80420138 -122665394 - MLT1A1 LTR MaLR 0 365 1 2126 213 75 35 chr5 80420138 80420352 -122665180 + MLT1F1 LTR MaLR 363 567 0 2205 250 35 23 chr5 80421031 80421635 -122663897 + L1MC4 LINE L1 5295 5905 -1903 212 86 29 0 chr5 80421637 80421672 -122663860 + (TG)n Simple_repeat Simple_repeat 2 37 0 812 235 185 54 chr5 80421681 80422163 -122663369 + L1MC4 LINE L1 6047 6465 -1435 2517 122 45 21 chr5 80422163 80422581 -122662951 + MSTA LTR MaLR 1 428 0 812 235 185 54 chr5 80422581 80422909 -122662623 + L1MC4 LINE L1 6465 7013 -887 1741 159 51 54 chr5 80423037 80423428 -122662104 + MLT1B LTR MaLR 1 390 0 253 304 0 33 chr5 80423563 80423655 -122661877 + L1MC4 LINE L1 7201 7289 -753 1745 132 106 7 chr5 80423996 80424269 -122661263 + AluSg SINE Alu 1 300 -10 986 140 0 0 chr5 80424300 80424443 -122661089 + AluSg/x SINE Alu 135 277 -35 630 222 0 57 chr5 80424462 80424638 -122660894 + L1MC4 LINE L1 7727 7892 -150 1983 174 65 47 chr5 80424656 80424713 -122660819 - MLT2B2 LTR ERVL 0 515 460 324 0 0 0 chr5 80424713 80424749 -122660783 + (TG)n Simple_repeat Simple_repeat 2 37 0 1983 174 65 47 chr5 80424749 80425139 -122660393 - MLT2B2 LTR ERVL -55 460 60 569 216 15 30 chr5 80425168 80425302 -122660230 - FLAM_A SINE Alu 0 142 11 423 127 28 0 chr5 80425302 80425373 -122660159 - MLT2B2 LTR ERVL -447 73 1 26 30 0 0 chr5 80425394 80425427 -122660105 + AT_rich Low_complexity Low_complexity 1 33 0 1884 131 57 3 chr5 80425601 80425883 -122659649 - AluSx SINE Alu -15 297 1 252 182 0 0 chr5 80425912 80425956 -122659576 - Tigger1 DNA MER2_type -389 2029 1986 360 0 0 0 chr5 80426187 80426227 -122659305 + (CA)n Simple_repeat Simple_repeat 2 41 0 2981 177 14 58 chr5 80427006 80427645 -122657887 + LTR9 LTR ERV1 1 611 -1 3812 173 55 12 chr5 80429903 80430643 -122654889 + L1MB5 LINE L1 5372 6143 -31 1622 162 8 8 chr5 80430711 80430976 -122654556 + AluJo SINE Alu 22 286 -26 232 194 0 42 chr5 80432195 80432267 -122653265 + GA-rich Low_complexity Low_complexity 4 72 0 354 312 43 0 chr5 80432404 80432542 -122652990 + MIR SINE MIR 32 175 -87 32 0 0 0 chr5 80432793 80432825 -122652707 + AT_rich Low_complexity Low_complexity 1 32 0 200 97 32 0 chr5 80433335 80433366 -122652166 + (CA)n Simple_repeat Simple_repeat 2 33 0 575 270 46 25 chr5 80433479 80433675 -122651857 + MIR SINE MIR 9 208 -54 429 147 0 0 chr5 80434946 80435014 -122650518 - AluS SINE Alu -13 298 231 2538 122 50 0 chr5 80435023 80435554 -122649978 + MER51A LTR ERV1 6 634 0 1572 152 0 0 chr5 80435554 80435784 -122649748 - AluSq SINE Alu -82 231 2 799 187 29 75 chr5 80436352 80436553 -122648979 + L1MB4 LINE L1 5943 6152 -19 1963 149 0 13 chr5 80436553 80436854 -122648678 + AluJo SINE Alu 1 297 -15 2134 104 0 28 chr5 80436854 80437167 -122648365 + AluSx SINE Alu 1 306 0 799 187 29 75 chr5 80437167 80437190 -122648342 + L1MB4 LINE L1 6151 6144 -27 243 0 0 0 chr5 80437190 80437217 -122648315 + (TA)n Simple_repeat Simple_repeat 2 28 0 799 187 29 75 chr5 80437217 80437237 -122648295 + L1MB4 LINE L1 6143 6162 -9 580 249 17 91 chr5 80439123 80439364 -122646168 + MIR SINE MIR 39 261 -1 22 56 0 0 chr5 80439394 80439430 -122646102 + AT_rich Low_complexity Low_complexity 1 36 0 352 216 144 0 chr5 80440039 80440178 -122645354 - MIR3 SINE MIR -7 201 43 1806 143 26 0 chr5 80441901 80442174 -122643358 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr5 80442175 80442199 -122643333 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 433 230 40 10 chr5 80443095 80443195 -122642337 - Tigger7 DNA MER2_type 0 2587 2485 29 47 0 0 chr5 80443853 80443896 -122641636 + GC_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 80444071 80444093 -122641439 + GC_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 80444143 80444165 -122641367 + GC_rich Low_complexity Low_complexity 1 22 0 218 132 0 113 chr5 80445565 80445618 -122639914 - MIR SINE MIR -64 144 98 444 289 94 5 chr5 80446574 80446775 -122638757 - L2 LINE L2 -104 3209 2991 1838 193 184 11 chr5 80446775 80447247 -122638285 - MLT1F1 LTR MaLR 0 567 14 1628 231 121 42 chr5 80447268 80447927 -122637605 - L2 LINE L2 -339 2975 2265 549 250 31 19 chr5 80449118 80449278 -122636254 + MIR SINE MIR 48 209 -53 295 299 147 11 chr5 80450581 80450758 -122634774 - MIR SINE MIR -1 261 61 2710 120 21 23 chr5 80451108 80451541 -122633991 + MSTB1 LTR MaLR 1 432 0 1328 158 26 145 chr5 80452505 80452891 -122632641 - MER58B DNA MER1_type -1 340 1 1286 186 12 25 chr5 80452912 80453154 -122632378 + L1MB3 LINE L1 5 243 -6141 269 128 0 0 chr5 80453153 80453192 -122632340 + L1MB3 LINE L1 1252 1290 -5094 * 3540 159 20 68 chr5 80453189 80454395 -122631137 + L1MB3 LINE L1 1830 3003 -3379 1400 175 30 30 chr5 80454404 80454667 -122630865 + AluJo SINE Alu 34 296 -16 9510 193 37 46 chr5 80454675 80456980 -122628552 + L1MB3 LINE L1 3006 5331 -1088 2171 126 3 0 chr5 80456980 80457282 -122628250 - AluSx SINE Alu -5 307 5 9510 193 37 46 chr5 80457282 80458245 -122627287 + L1MB3 LINE L1 5331 6249 -170 1671 151 13 67 chr5 80458245 80458557 -122626975 - AluJb SINE Alu -4 308 14 9510 193 37 46 chr5 80458557 80458697 -122626835 + L1MB3 LINE L1 6249 6389 -30 1016 210 137 111 chr5 80458702 80459127 -122626405 + MER34B LTR ERV1 1 444 -121 1786 165 7 3 chr5 80459127 80459412 -122626120 + AluJb SINE Alu 1 286 -26 1016 210 137 111 chr5 80459412 80459525 -122626007 + MER34B LTR ERV1 444 553 -12 376 265 76 0 chr5 80459902 80460034 -122625498 + Charlie2 DNA MER1_type 1 142 -2640 235 208 38 0 chr5 80460098 80460151 -122625381 + Charlie2 DNA MER1_type 273 327 -2535 228 241 0 0 chr5 80460157 80460211 -122625321 + Charlie2 DNA MER1_type 1868 1921 -941 1608 124 8 148 chr5 80460247 80460523 -122625009 + Tigger3(Golem) DNA MER2_type 27 239 -992 4481 130 40 9 chr5 80460523 80461223 -122624309 - MER72 LTR ERV1 0 722 1 1608 124 8 148 chr5 80461223 80461318 -122624214 + Tigger3(Golem) DNA MER2_type 239 346 -885 779 120 0 53 chr5 80461320 80461453 -122624079 + FLAM_C SINE Alu 14 139 -4 5002 121 63 19 chr5 80461453 80461732 -122623800 + Tigger3b DNA MER2_type 341 606 -2422 2273 84 7 0 chr5 80461732 80462018 -122623514 - AluSc SINE Alu -21 288 1 5002 121 63 19 chr5 80462018 80462050 -122623482 + Tigger3b DNA MER2_type 606 635 -2393 1606 206 3 16 chr5 80462050 80462366 -122623166 - AluJb SINE Alu 0 312 1 5002 121 63 19 chr5 80462366 80462906 -122622626 + Tigger3b DNA MER2_type 635 1231 0 1649 187 118 52 chr5 80462912 80463505 -122622027 + Charlie2 DNA MER1_type 1927 2558 -304 916 138 30 18 chr5 80464182 80464349 -122621183 + MER101 LTR ERV1 10 178 -296 231 245 0 0 chr5 80464410 80464459 -122621073 + T-rich Low_complexity Low_complexity 1 49 0 745 94 19 0 chr5 80464460 80464566 -122620966 - HY1 scRNA scRNA -4 108 1 2096 126 0 3 chr5 80464635 80464929 -122620603 + AluSx SINE Alu 1 293 -19 1980 142 0 3 chr5 80464931 80465242 -122620290 + AluSx SINE Alu 1 310 -2 734 221 28 51 chr5 80465241 80465303 -122620229 + MER101 LTR ERV1 263 325 -149 1666 182 30 3 chr5 80465303 80465599 -122619933 - AluJo SINE Alu -8 304 1 734 221 28 51 chr5 80465599 80465753 -122619779 + MER101 LTR ERV1 325 474 0 776 226 62 4 chr5 80465838 80466064 -122619468 + Charlie2 DNA MER1_type 2624 2862 0 207 0 0 0 chr5 80468403 80468426 -122617106 + (T)n Simple_repeat Simple_repeat 1 23 0 1538 178 42 11 chr5 80468608 80468895 -122616637 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr5 80469238 80469260 -122616272 + AT_rich Low_complexity Low_complexity 1 22 0 1839 163 7 3 chr5 80470360 80470655 -122614877 - AluSx SINE Alu -16 296 1 203 0 37 0 chr5 80470810 80470837 -122614695 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2110 102 31 17 chr5 80471117 80471411 -122614121 - AluSx SINE Alu -14 298 1 378 251 129 49 chr5 80471440 80471759 -122613773 - L1MC4a LINE L1 -394 5727 5539 2212 137 9 18 chr5 80472241 80472583 -122612949 + MER1B DNA MER1_type 1 339 0 247 196 71 0 chr5 80472583 80472639 -122612893 + MLT1L LTR MaLR 554 613 -2 26 0 0 0 chr5 80472726 80472752 -122612780 + AT_rich Low_complexity Low_complexity 1 26 0 941 246 99 14 chr5 80472882 80473229 -122612303 + MLT1J2 LTR MaLR 3 396 -50 1919 152 0 3 chr5 80473403 80473700 -122611832 - AluSx SINE Alu -16 296 1 28 29 0 0 chr5 80473887 80473922 -122611610 + AT_rich Low_complexity Low_complexity 1 35 0 1672 143 7 11 chr5 80475248 80475521 -122610011 + AluJb SINE Alu 28 299 -13 230 217 117 0 chr5 80475526 80475586 -122609946 + MIR3 SINE MIR 119 185 -23 1840 174 3 0 chr5 80475592 80475885 -122609647 - AluJb SINE Alu -16 296 3 2061 115 3 10 chr5 80475936 80476231 -122609301 - AluSx SINE Alu -19 293 1 1992 148 0 16 chr5 80476445 80476762 -122608770 - AluJb SINE Alu 0 312 1 2199 93 7 13 chr5 80477860 80478161 -122607371 - AluSq SINE Alu -14 299 1 24 0 0 0 chr5 80478173 80478197 -122607335 + AT_rich Low_complexity Low_complexity 1 24 0 557 232 38 103 chr5 80478268 80478453 -122607079 + MER5B DNA MER1_type 6 178 0 2123 134 0 13 chr5 80479748 80480062 -122605470 + AluSx SINE Alu 1 310 -2 1226 163 26 4 chr5 80480280 80480507 -122605025 - MER46A DNA MER2_type -4 232 1 1604 171 16 33 chr5 80483029 80483333 -122602199 - AluJo SINE Alu -13 299 1 337 324 14 14 chr5 80483351 80483493 -122602039 + L1MC4a LINE L1 5524 5665 -2143 240 35 0 0 chr5 80483499 80483528 -122602004 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 267 0 17 chr5 80483537 80483597 -122601935 + (TA)n Simple_repeat Simple_repeat 2 60 0 350 241 146 7 chr5 80483647 80483784 -122601748 + L1MC4a LINE L1 5694 5849 -1959 1090 195 0 35 chr5 80483956 80483998 -122601534 - AluJb SINE Alu -11 301 259 2070 146 141 5 chr5 80483998 80484375 -122601157 + MSTA LTR MaLR 1 428 0 1090 195 0 35 chr5 80484375 80484558 -122600974 - AluJb SINE Alu -53 259 84 21 0 0 0 chr5 80484702 80484723 -122600809 + AT_rich Low_complexity Low_complexity 1 21 0 237 132 0 0 chr5 80484767 80484805 -122600727 + (T)n Simple_repeat Simple_repeat 1 38 0 2459 204 51 16 chr5 80485133 80485703 -122599829 - L1MD1 LINE L1 -1 6241 5652 1057 182 75 25 chr5 80485689 80486124 -122599408 - L1MDa LINE L1 -3748 2792 2341 * 346 235 8 84 chr5 80486114 80486160 -122599372 - L1MDa LINE L1 -5941 589 541 * 1683 180 0 20 chr5 80486160 80486466 -122599066 - AluJo SINE Alu -12 300 1 346 235 8 84 chr5 80486466 80486538 -122598994 - L1MDa LINE L1 -5989 541 480 485 212 123 85 chr5 80487160 80487396 -122598136 - L1MC4 LINE L1 -5 8037 7793 796 203 35 50 chr5 80487431 80487692 -122597840 - L1MC4a LINE L1 -1755 6053 5797 1201 178 98 68 chr5 80487692 80487925 -122597607 + MER2 DNA MER2_type 2 226 -119 1522 184 9 32 chr5 80487925 80488241 -122597291 - AluJb SINE Alu -3 309 1 1201 178 98 68 chr5 80488241 80488268 -122597264 + MER2 DNA MER2_type 226 251 -94 1870 159 17 0 chr5 80488268 80488570 -122596962 + AluSx SINE Alu 2 308 -4 1201 178 98 68 chr5 80488570 80488634 -122596898 + MER2 DNA MER2_type 251 337 -8 1177 246 64 11 chr5 80488645 80488970 -122596562 - L1MC4a LINE L1 -2013 5795 5448 2842 3 0 0 chr5 80488970 80489275 -122596257 - AluY SINE Alu -6 305 1 1177 246 64 11 chr5 80489275 80489306 -122596226 - L1MC4a LINE L1 -2360 5448 5420 1996 100 0 4 chr5 80589601 80589860 -122495672 - AluY SINE Alu -53 258 1 2450 81 7 0 chr5 80589861 80590169 -122495363 - AluSq SINE Alu -3 310 1 843 218 6 29 chr5 80590243 80590413 -122495119 - AluJo SINE Alu -21 291 126 287 308 115 0 chr5 80590624 80590728 -122494804 - L2 LINE L2 0 3272 3157 286 293 18 44 chr5 80590767 80590928 -122494604 - MER5A DNA MER1_type -22 167 1 227 149 21 21 chr5 80590937 80590984 -122494548 - Charlie7 DNA MER1_type -1 2611 2565 1978 129 0 11 chr5 80591011 80591298 -122494234 + AluSx SINE Alu 1 284 -28 27 0 0 0 chr5 80591298 80591325 -122494207 + AT_rich Low_complexity Low_complexity 1 27 0 1814 160 19 41 chr5 80592117 80592310 -122493222 - AluJb SINE Alu 0 312 127 243 0 0 0 chr5 80592310 80592337 -122493195 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1814 160 19 41 chr5 80592337 80592462 -122493070 - AluJb SINE Alu -185 127 1 193 267 183 30 chr5 80592614 80592745 -122492787 + MIR SINE MIR 26 176 -86 650 219 26 0 chr5 80593082 80593196 -122492336 + FLAM_C SINE Alu 2 118 -25 194 0 39 0 chr5 80593202 80593228 -122492304 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2135 130 6 16 chr5 80593448 80593763 -122491769 - AluSx SINE Alu 0 312 1 1193 151 0 50 chr5 80593766 80593985 -122491547 - AluJo SINE Alu -20 292 85 330 259 27 18 chr5 80594005 80594117 -122491415 - MER5A DNA MER1_type -5 184 72 211 214 71 75 chr5 80594166 80594302 -122491230 + MIR SINE MIR 63 140 -68 358 295 131 16 chr5 80594727 80594910 -122490622 - MIR SINE MIR -30 232 29 223 241 0 19 chr5 80595955 80596009 -122489523 - L2 LINE L2 -3 3269 3217 1129 282 69 19 chr5 80596021 80596261 -122489271 + LTR16B LTR ERVL 22 293 -171 2217 94 0 17 chr5 80596261 80596559 -122488973 + AluSx SINE Alu 1 293 -19 1129 282 69 19 chr5 80596559 80596740 -122488792 + LTR16B LTR ERVL 293 464 0 2079 91 29 0 chr5 80597575 80597872 -122487660 + AluSq SINE Alu 1 305 0 211 211 35 18 chr5 80598618 80598675 -122486857 + CT-rich Low_complexity Low_complexity 3 60 0 440 153 12 0 chr5 80600602 80600687 -122484845 + (TA)n Simple_repeat Simple_repeat 2 87 0 249 152 0 0 chr5 80600687 80600733 -122484799 - LTR66 LTR ERVL -171 439 394 301 341 65 0 chr5 80601084 80601207 -122484325 + MIR SINE MIR 16 146 -62 350 241 98 23 chr5 80601393 80601526 -122484006 + MLT1I LTR MaLR 103 245 -164 422 235 0 0 chr5 80601975 80602056 -122483476 + MER5A DNA MER1_type 9 89 -100 336 273 155 21 chr5 80602103 80602297 -122483235 + MLT1I LTR MaLR 164 383 -26 22 0 0 0 chr5 80602664 80602686 -122482846 + AT_rich Low_complexity Low_complexity 1 22 0 231 36 0 0 chr5 80604432 80604460 -122481072 + (A)n Simple_repeat Simple_repeat 1 28 0 2264 88 31 0 chr5 80606544 80606838 -122478694 - AluSx SINE Alu -9 303 1 1050 249 114 49 chr5 80606943 80607419 -122478113 + L2 LINE L2 2762 3289 -24 222 143 0 41 chr5 80609852 80609901 -122475631 + (CCCGG)n Simple_repeat Simple_repeat 4 50 0 46 19 0 0 chr5 80611842 80611895 -122473637 + AT_rich Low_complexity Low_complexity 1 53 0 651 233 0 0 chr5 80611895 80612011 -122473521 - FLAM_A SINE Alu -17 116 1 869 141 0 8 chr5 80612169 80612297 -122473235 - FLAM_C SINE Alu -6 127 1 243 338 79 0 chr5 80612507 80612646 -122472886 - MER117 DNA MER1_type -47 150 1 1650 109 142 4 chr5 80612760 80613035 -122472497 - AluSq SINE Alu 0 313 1 1369 155 26 9 chr5 80613342 80613574 -122471958 + MER46A DNA MER2_type 1 236 0 332 275 92 0 chr5 80614278 80614409 -122471123 + L1MC5 LINE L1 7399 7541 -420 988 59 17 0 chr5 80614523 80614642 -122470890 + AluSq/x SINE Alu 12 132 -181 28 0 0 0 chr5 80614642 80614670 -122470862 + AT_rich Low_complexity Low_complexity 1 28 0 1078 224 65 4 chr5 80614978 80615224 -122470308 - MIR SINE MIR 0 262 2 753 320 93 20 chr5 80615357 80615766 -122469766 + L2 LINE L2 2428 2866 -448 262 286 50 8 chr5 80616114 80616233 -122469299 + MLT1I LTR MaLR 19 142 -267 296 262 8 107 chr5 80616397 80616519 -122469013 + MLT1H LTR MaLR 440 549 0 753 185 0 0 chr5 80617023 80617153 -122468379 - FLAM_C SINE Alu -3 130 1 1902 202 92 28 chr5 80617207 80617643 -122467889 + MLT2B1 LTR ERVL 1 464 -56 2403 82 0 0 chr5 80617750 80618042 -122467490 - AluSg SINE Alu -18 292 1 255 280 96 34 chr5 80618140 80618379 -122467153 - L1M4 LINE L1 -961 5185 4932 1980 146 7 7 chr5 80618556 80618857 -122466675 + AluJb SINE Alu 1 301 -11 258 299 108 32 chr5 80619411 80619568 -122465964 + MER5B DNA MER1_type 5 173 -5 1492 208 32 61 chr5 80619718 80619982 -122465550 + MLT1A2 LTR MaLR 1 252 -122 1954 161 0 0 chr5 80619982 80620281 -122465251 - AluSx SINE Alu -13 299 1 1492 208 32 61 chr5 80620281 80620391 -122465141 + MLT1A2 LTR MaLR 252 364 -10 335 89 0 0 chr5 80620506 80620551 -122464981 + HERVL-B1 LTR ERVL 2 46 -5608 2690 128 25 5 chr5 80620551 80620951 -122464581 + MER4D LTR ERV1 1 408 -495 2299 105 3 3 chr5 80620951 80621256 -122464276 - AluSx SINE Alu -7 305 1 3107 146 35 0 chr5 80621264 80621744 -122463788 - MER4B-int LTR ERV1 -6024 734 238 1233 100 92 30 chr5 80621783 80621860 -122463672 - MER4B-int LTR ERV1 -6467 291 220 180 0 0 0 chr5 80621860 80621880 -122463652 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1233 100 92 30 chr5 80621880 80622077 -122463455 - MER4B-int LTR ERV1 -6538 220 1 808 181 0 0 chr5 80622079 80622235 -122463297 + AluJb SINE Alu 157 312 0 485 242 83 0 chr5 80622246 80622502 -122463030 + FLAM_C SINE Alu 14 279 0 863 194 50 0 chr5 80622510 80622670 -122462862 + AluJb SINE Alu 129 296 -16 22 35 0 0 chr5 80622670 80622699 -122462833 + AT_rich Low_complexity Low_complexity 1 29 0 4580 195 26 29 chr5 80622699 80623568 -122461964 + HERVL-B1 LTR ERVL 1194 2061 -3703 3510 147 10 2 chr5 80623568 80624091 -122461441 - MER1A DNA MER1_type 0 527 1 4580 195 26 29 chr5 80624091 80624119 -122461413 + HERVL-B1 LTR ERVL 2061 2088 -3676 1175 156 0 0 chr5 80624121 80624300 -122461232 - AluSg/x SINE Alu 0 310 132 2241 103 7 0 chr5 80624300 80624592 -122460940 - AluSq SINE Alu -19 294 1 15438 144 12 6 chr5 80624592 80626932 -122458600 + HERVL-B1 LTR ERVL 2081 4436 -1328 1375 198 4 4 chr5 80626932 80627180 -122458352 - AluJb SINE Alu -64 248 1 6243 130 12 7 chr5 80627181 80628104 -122457428 + HERVL-B1 LTR ERVL 4504 5431 -333 201 175 0 0 chr5 80628106 80628146 -122457386 + (TG)n Simple_repeat Simple_repeat 1 40 0 371 62 0 0 chr5 80628163 80628211 -122457321 + MLT2B1 LTR ERVL 473 520 0 549 231 111 22 chr5 80628367 80628801 -122456731 - MER113 DNA MER1_type? -2 519 16 1868 173 3 3 chr5 80629272 80629584 -122455948 + AluJb SINE Alu 1 312 0 297 0 0 0 chr5 80630020 80630053 -122455479 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1758 121 64 18 chr5 80630129 80630409 -122455123 + MER1B DNA MER1_type 47 339 0 1551 180 70 3 chr5 80630704 80630988 -122454544 + AluJo SINE Alu 1 303 -9 22 0 0 0 chr5 80631540 80631562 -122453970 + AT_rich Low_complexity Low_complexity 1 22 0 2029 130 0 3 chr5 80631908 80632193 -122453339 - AluSx SINE Alu -3 309 26 841 269 75 60 chr5 80632193 80632591 -122452941 - MLT1K LTR MaLR -6 582 179 782 131 0 39 chr5 80632850 80632980 -122452552 + FLAM_C SINE Alu 1 125 -8 28 29 0 0 chr5 80633000 80633035 -122452497 + AT_rich Low_complexity Low_complexity 1 35 0 1313 186 29 32 chr5 80633035 80633380 -122452152 - MER106B DNA MER1_type -49 1010 667 2095 141 3 0 chr5 80633387 80633692 -122451840 - AluSp SINE Alu -7 306 1 809 169 0 7 chr5 80633692 80633828 -122451704 - AluJo SINE Alu -177 135 1 1674 163 63 9 chr5 80633850 80634169 -122451363 - MER106B DNA MER1_type -541 518 183 347 306 163 49 chr5 80634213 80634415 -122451117 - L3 LINE CR1 -422 1155 977 1933 167 0 3 chr5 80634415 80634715 -122450817 + AluJb SINE Alu 1 299 -13 347 306 163 49 chr5 80634715 80634898 -122450634 - L3 LINE CR1 -600 977 726 1832 179 3 6 chr5 80636462 80636812 -122448720 + AluJb SINE Alu 1 349 0 1805 192 68 0 chr5 80637380 80637718 -122447814 + LTR32 LTR ERVL 14 374 -97 293 194 60 0 chr5 80637881 80637948 -122447584 + LTR32 LTR ERVL 365 435 -36 7408 31 26 0 chr5 80637948 80639406 -122446126 + L1PA3 LINE L1 4674 6155 0 937 198 121 105 chr5 80639407 80639674 -122445858 + MLT2B1 LTR ERVL 202 476 -44 342 45 0 0 chr5 80639674 80639718 -122445814 + (CA)n Simple_repeat Simple_repeat 2 45 0 937 198 121 105 chr5 80639718 80639764 -122445768 + MLT2B1 LTR ERVL 476 520 0 205 356 58 0 chr5 80639974 80640061 -122445471 + L2 LINE L2 3160 3251 -21 248 264 140 72 chr5 80640084 80640118 -122445414 + L1ME LINE L1 4729 4759 -1387 1838 163 3 0 chr5 80640118 80640425 -122445107 + AluJb SINE Alu 1 308 0 248 264 140 72 chr5 80640425 80640540 -122444992 + L1ME LINE L1 4759 4865 -1281 1934 135 3 30 chr5 80640540 80640844 -122444688 - AluSx SINE Alu -15 297 2 248 264 140 72 chr5 80640844 80641170 -122444362 + L1ME LINE L1 4865 5244 -902 4185 110 5 33 chr5 80641170 80641798 -122443734 + MER4B LTR ERV1 1 610 0 248 264 140 72 chr5 80641798 80641819 -122443713 + L1ME LINE L1 5244 5262 -884 285 316 60 23 chr5 80641923 80642056 -122443476 + L1ME LINE L1 5389 5526 -595 441 116 0 0 chr5 80642601 80642670 -122442862 + (TCCC)n Simple_repeat Simple_repeat 3 71 0 2424 55 0 7 chr5 80642670 80642963 -122442569 - AluY SINE Alu -20 291 1 603 217 76 6 chr5 80643824 80643877 -122441655 - MER5A DNA MER1_type -21 168 120 1633 187 16 55 chr5 80643877 80644197 -122441335 - MLT1A1 LTR MaLR -1 364 60 2161 95 53 0 chr5 80644197 80644482 -122441050 - AluSx SINE Alu -12 300 1 1633 187 16 55 chr5 80644482 80644540 -122440992 - MLT1A1 LTR MaLR -305 60 1 603 217 76 6 chr5 80644540 80644643 -122440889 - MER5A DNA MER1_type -69 120 1 444 211 16 65 chr5 80644955 80645078 -122440454 - MER5B DNA MER1_type -61 117 1 302 98 0 0 chr5 80645089 80645130 -122440402 - MSTB LTR MaLR 0 426 386 2048 135 0 0 chr5 80645130 80645411 -122440121 + AluSx SINE Alu 1 281 -31 866 130 0 0 chr5 80645411 80645526 -122440006 - AluJo/FLAM SINE Alu -189 123 9 2036 164 39 66 chr5 80645726 80646271 -122439261 - LTR9 LTR ERV1 0 612 1 182 321 68 93 chr5 80646271 80646372 -122439160 - L2 LINE L2 -49 3223 3121 4971 87 41 1 chr5 80646372 80647037 -122438495 - LTR8 LTR ERV1 0 691 1 182 321 68 93 chr5 80647037 80647215 -122438317 - L2 LINE L2 -151 3121 2951 301 211 0 0 chr5 80647472 80647529 -122438003 - MER5A DNA MER1_type -52 137 81 207 114 0 0 chr5 80648325 80648360 -122437172 + (A)n Simple_repeat Simple_repeat 1 35 0 937 195 0 24 chr5 80648361 80648530 -122437002 + FRAM SINE Alu 1 158 -18 1018 173 0 0 chr5 80648621 80648783 -122436749 - AluSg/x SINE Alu -14 296 135 2336 100 0 0 chr5 80648796 80649087 -122436445 - AluSg SINE Alu -19 291 1 849 270 225 27 chr5 80649113 80649219 -122436313 + MLT1G1 LTR MaLR 1 85 -510 1908 157 25 73 chr5 80649219 80649627 -122435905 + MLT1B LTR MaLR 3 390 0 849 270 225 27 chr5 80649627 80649853 -122435679 + MLT1G1 LTR MaLR 85 399 -196 292 171 43 29 chr5 80649872 80649942 -122435590 + MLT1G1 LTR MaLR 444 514 -28 619 253 82 79 chr5 80649995 80650375 -122435157 + L2 LINE L2 2933 3313 0 884 96 0 52 chr5 80650434 80650570 -122434962 - FLAM_C SINE Alu 0 133 5 274 237 92 40 chr5 80650616 80650768 -122434764 - MER103 DNA DNA -2 164 5 4373 125 15 3 chr5 80650874 80651528 -122434004 + L1PA16 LINE L1 5488 6149 -17 464 113 28 0 chr5 80651596 80651667 -122433865 - AluJo SINE Alu -176 136 64 425 198 24 145 chr5 80651673 80651880 -122433652 + MER112 DNA MER1_type 38 219 -41 1387 121 5 5 chr5 80652039 80652254 -122433278 - L1MA2 LINE L1 -4 6300 6086 1104 220 149 22 chr5 80652535 80653037 -122432495 - L1ME4a LINE L1 -40 6081 5518 2495 124 25 55 chr5 80655085 80655562 -122429970 + L1MB3 LINE L1 5713 6172 -11 1705 37 56 9 chr5 80658125 80658341 -122427191 - AluSq SINE Alu -12 301 76 36 91 0 0 chr5 80659417 80659516 -122426016 + GC_rich Low_complexity Low_complexity 1 99 0 228 226 0 0 chr5 80659584 80659637 -122425895 + GA-rich Low_complexity Low_complexity 1 53 0 216 206 15 29 chr5 80659624 80659692 -122425840 + (CGG)n Simple_repeat Simple_repeat 2 68 0 * 24 0 0 0 chr5 80659778 80659802 -122425730 + GC_rich Low_complexity Low_complexity 1 24 0 254 121 0 17 chr5 80659802 80659860 -122425672 + (CGG)n Simple_repeat Simple_repeat 1 57 0 226 24 0 73 chr5 80661476 80661517 -122424015 + (CCG)n Simple_repeat Simple_repeat 3 40 0 22 56 0 0 chr5 80661582 80661618 -122423914 + GC_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 80661634 80661656 -122423876 + GC_rich Low_complexity Low_complexity 1 22 0 290 253 178 34 chr5 80666747 80666893 -122418639 - L1ME3A LINE L1 -9 6161 5995 392 224 16 96 chr5 80666923 80667048 -122418484 - MIR SINE MIR -70 192 78 231 88 0 0 chr5 80667419 80667453 -122418079 + (CA)n Simple_repeat Simple_repeat 1 34 0 2680 29 3 0 chr5 80668469 80668775 -122416757 - AluY SINE Alu -4 307 1 25 31 0 0 chr5 80670066 80670098 -122415434 + AT_rich Low_complexity Low_complexity 1 32 0 22 56 0 0 chr5 80671009 80671045 -122414487 + GC_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 80671871 80671899 -122413633 + GC_rich Low_complexity Low_complexity 1 28 0 237 33 0 0 chr5 80673395 80673425 -122412107 + (TC)n Simple_repeat Simple_repeat 2 31 0 996 211 80 42 chr5 80673941 80674253 -122411279 - L1ME3A LINE L1 -3 6167 5844 2735 212 97 22 chr5 80675244 80675969 -122409563 + L1MD2 LINE L1 5421 6199 -160 2338 50 0 18 chr5 80675990 80676271 -122409261 + AluY SINE Alu 5 280 -31 2128 133 0 3 chr5 80676344 80676652 -122408880 + AluSx SINE Alu 6 312 0 451 230 164 0 chr5 80676672 80676824 -122408708 + L1MD2 LINE L1 6183 6359 0 216 0 0 0 chr5 80677025 80677049 -122408483 + (A)n Simple_repeat Simple_repeat 1 24 0 592 279 128 8 chr5 80677065 80677316 -122408216 - MARNA DNA Mariner -226 360 80 2157 80 59 3 chr5 80677526 80677813 -122407719 - AluSq SINE Alu -10 303 1 935 142 0 8 chr5 80678750 80678884 -122406648 + FLAM_C SINE Alu 1 133 0 223 129 194 32 chr5 80678926 80678988 -122406544 - L2 LINE L2 0 3313 3242 264 318 68 11 chr5 80679093 80679181 -122406351 - L2 LINE L2 -188 3084 2992 507 338 43 17 chr5 80679702 80679815 -122405717 - MIR SINE MIR -4 258 149 1744 154 25 44 chr5 80679815 80680133 -122405399 + AluJo SINE Alu 1 312 0 507 338 43 17 chr5 80680133 80680253 -122405279 - MIR SINE MIR -113 149 19 1707 170 93 19 chr5 80680751 80681075 -122404457 - MER7A DNA MER2_type 0 346 1 227 333 0 0 chr5 80681075 80681135 -122404397 - MIR SINE MIR -183 79 20 691 231 14 7 chr5 80681770 80681913 -122403619 - MER5A DNA MER1_type 0 189 46 2874 177 38 15 chr5 80681936 80682462 -122403070 - MLT2B3 LTR ERVL -16 538 1 1663 217 101 47 chr5 80682497 80683049 -122402483 + MLT1E LTR MaLR 7 588 -5 2100 118 3 20 chr5 80684530 80684836 -122400696 + AluSx SINE Alu 1 301 -11 27 0 0 0 chr5 80685279 80685306 -122400226 + AT_rich Low_complexity Low_complexity 1 27 0 635 294 108 13 chr5 80685605 80685836 -122399696 + MIR SINE MIR 4 256 -6 224 200 33 0 chr5 80685905 80685965 -122399567 + (TA)n Simple_repeat Simple_repeat 2 63 0 1762 188 20 85 chr5 80686192 80686592 -122398940 + MLT1A2 LTR MaLR 1 374 0 2194 103 0 0 chr5 80687448 80687740 -122397792 - AluSx SINE Alu -8 304 13 22 35 0 0 chr5 80689192 80689221 -122396311 + GC_rich Low_complexity Low_complexity 1 29 0 334 177 191 71 chr5 80692015 80692156 -122393376 + L1ME4a LINE L1 5964 6121 0 439 278 43 19 chr5 80692744 80692906 -122392626 + MIR3 SINE MIR 8 173 -35 205 319 53 35 chr5 80693118 80693231 -122392301 - L2 LINE L2 -15 3257 3143 1369 262 74 27 chr5 80694066 80694512 -122391020 + MLT1J LTR MaLR 1 467 -44 434 396 20 8 chr5 80694807 80695062 -122390470 + L2 LINE L2 2413 2670 -644 351 79 175 0 chr5 80695132 80695195 -122390337 + MER116 DNA Mariner 7 80 0 973 170 6 6 chr5 80696638 80696797 -122388735 - MER5A DNA MER1_type 0 189 31 216 0 0 0 chr5 80696938 80696962 -122388570 + (TG)n Simple_repeat Simple_repeat 2 25 0 1872 145 10 7 chr5 80697031 80697320 -122388212 + AluJo SINE Alu 3 292 -20 1344 186 67 32 chr5 80697548 80697833 -122387699 - AluJo SINE Alu -17 295 1 23 68 0 0 chr5 80697833 80697877 -122387655 + AT_rich Low_complexity Low_complexity 1 44 0 31 58 0 0 chr5 80698184 80698236 -122387296 + AT_rich Low_complexity Low_complexity 1 52 0 290 169 138 0 chr5 80699525 80699590 -122385942 + LTR67 LTR ERVL 484 557 0 838 229 38 0 chr5 80699813 80700023 -122385509 + L1ME3 LINE L1 5945 6162 0 200 293 0 17 chr5 80700548 80700606 -122384926 - MIR SINE MIR -102 160 104 22 35 0 0 chr5 80701736 80701765 -122383767 + AT_rich Low_complexity Low_complexity 1 29 0 878 153 12 24 chr5 80702264 80702434 -122383098 + FRAM SINE Alu 9 176 0 2114 105 11 7 chr5 80702810 80703096 -122382436 + AluSc SINE Alu 1 287 -22 24 0 0 0 chr5 80703564 80703588 -122381944 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 80703639 80703660 -122381872 + AT_rich Low_complexity Low_complexity 1 21 0 227 288 110 14 chr5 80703897 80704043 -122381489 + L1ME4a LINE L1 5960 6119 -2 232 224 180 25 chr5 80704387 80704548 -122380984 - HsTC2 DNA Tc2 -1 1897 1712 685 208 114 17 chr5 80704548 80704816 -122380716 - HsTC2 DNA Tc2 -1581 317 3 2389 73 3 16 chr5 80704942 80705257 -122380275 + AluY SINE Alu 1 311 0 2135 100 4 4 chr5 80705843 80706153 -122379379 + AluSc SINE Alu 1 310 0 3726 154 22 5 chr5 80707103 80707706 -122377826 + L1MB3 LINE L1 5569 6181 -2 2033 169 38 38 chr5 80708156 80708583 -122376949 + L1MB3 LINE L1 5755 6181 -2 601 129 21 0 chr5 80708909 80709002 -122376530 - AluSg/x SINE Alu -81 231 137 2121 122 20 0 chr5 80709052 80709348 -122376184 + AluSq SINE Alu 1 302 -11 413 333 103 19 chr5 80709445 80709658 -122375874 + Charlie7 DNA MER1_type 123 353 -2259 1327 184 78 4 chr5 80709679 80709924 -122375608 - AluJo SINE Alu -27 285 23 1965 147 3 3 chr5 80709938 80710231 -122375301 - AluSx SINE Alu -19 293 1 1933 234 142 102 chr5 80710278 80710761 -122374771 + Charlie7 DNA MER1_type 415 877 -1735 998 131 0 0 chr5 80710761 80710891 -122374641 + FLAM_C SINE Alu 1 130 -3 1933 234 142 102 chr5 80710891 80711125 -122374407 + Charlie7 DNA MER1_type 877 1100 -1512 1077 80 0 43 chr5 80711125 80711288 -122374244 - L1PB1 LINE L1 0 6151 5996 1933 234 142 102 chr5 80711288 80711342 -122374190 + Charlie7 DNA MER1_type 1100 1150 -1462 2267 126 0 0 chr5 80711342 80711652 -122373880 - AluSx SINE Alu -2 310 1 1933 234 142 102 chr5 80711652 80712218 -122373314 + Charlie7 DNA MER1_type 1150 1822 -790 2352 109 0 0 chr5 80712218 80712520 -122373012 - AluSx SINE Alu -10 302 1 1933 234 142 102 chr5 80712520 80712674 -122372858 + Charlie7 DNA MER1_type 1822 1968 -644 1248 148 5 46 chr5 80712687 80712903 -122372629 + AluJo SINE Alu 74 280 -32 24 0 0 0 chr5 80713651 80713675 -122371857 + AT_rich Low_complexity Low_complexity 1 24 0 2258 104 0 10 chr5 80715273 80715572 -122369960 + AluSq SINE Alu 1 296 -17 1287 117 0 6 chr5 80715573 80715753 -122369779 + AluSq SINE Alu 133 311 -2 2467 81 0 3 chr5 80716053 80716362 -122369170 - AluY SINE Alu -3 308 1 4392 157 51 19 chr5 80716576 80717315 -122368217 - MER21B LTR ERV1 -100 763 1 368 309 41 0 chr5 80717351 80717474 -122368058 - MIR SINE MIR -114 148 21 423 297 55 55 chr5 80717563 80717615 -122367917 + MIR SINE MIR 17 68 -194 1786 174 13 0 chr5 80717615 80717920 -122367612 - AluJb SINE Alu -3 309 1 423 297 55 55 chr5 80717920 80718049 -122367483 + MIR SINE MIR 67 198 -64 203 344 58 32 chr5 80719231 80719385 -122366147 - L2 LINE L2 -19 3253 3096 647 266 142 61 chr5 80719565 80719792 -122365740 - Tigger8 DNA MER2_type -2 664 457 2325 58 0 4 chr5 80719792 80720069 -122365463 + AluSx SINE Alu 37 312 0 405 0 0 0 chr5 80720073 80720118 -122365414 + (TA)n Simple_repeat Simple_repeat 1 45 0 647 266 142 61 chr5 80720118 80720344 -122365188 - Tigger8 DNA MER2_type -211 455 169 4242 187 68 44 chr5 80720855 80721826 -122363706 + L1MD2 LINE L1 5159 6152 -207 1951 134 22 0 chr5 80721826 80722126 -122363406 + AluSx SINE Alu 1 306 0 4242 187 68 44 chr5 80722126 80722297 -122363235 + L1MD2 LINE L1 6152 6317 -42 556 161 54 95 chr5 80722293 80722461 -122363071 + L1MD1 LINE L1 6081 6241 -1 * 381 292 110 7 chr5 80722547 80722701 -122362831 - MARNA DNA Mariner -118 468 299 199 355 66 33 chr5 80722880 80723001 -122362531 - L2 LINE L2 -560 2754 2630 4820 220 71 63 chr5 80723453 80724003 -122361529 + MSTD-int LTR MaLR 410 954 -781 4497 139 63 4 chr5 80724003 80724681 -122360851 + MER72 LTR ERV1 5 722 0 4820 220 71 63 chr5 80724681 80725446 -122360086 + MSTD-int LTR MaLR 954 1735 0 2281 120 118 8 chr5 80725446 80725803 -122359729 + MSTD LTR MaLR 1 396 0 1046 191 0 0 chr5 80725814 80725976 -122359556 + FRAM SINE Alu 1 162 -4 498 350 151 24 chr5 80726061 80726676 -122358856 - L2 LINE L2 -561 2753 2061 1027 226 54 13 chr5 80726687 80726926 -122358606 - MIR SINE MIR 0 262 14 302 259 49 12 chr5 80727939 80728020 -122357512 + MER20B DNA MER1_type 100 183 -600 2049 136 0 0 chr5 80728044 80728330 -122357202 + AluSx SINE Alu 1 286 -26 16590 120 21 12 chr5 80729243 80731639 -122353893 + Tigger1 DNA MER2_type 1 2418 0 2211 58 4 0 chr5 80731756 80732017 -122353515 - AluY SINE Alu -15 296 35 296 313 61 56 chr5 80732982 80733180 -122352352 - L2 LINE L2 -49 3223 3025 21 0 0 0 chr5 80733197 80733218 -122352314 + AT_rich Low_complexity Low_complexity 1 21 0 396 290 87 24 chr5 80733304 80733511 -122352021 + L1MEd LINE L1 100 319 -5800 244 297 0 31 chr5 80733648 80733712 -122351820 + L1MEd LINE L1 532 593 -5526 473 279 108 26 chr5 80733812 80734153 -122351379 + L1MEd LINE L1 749 1117 -5002 2326 97 0 10 chr5 80734153 80734462 -122351070 - AluY SINE Alu -5 306 1 1732 285 63 28 chr5 80734479 80735094 -122350438 - L2 LINE L2 -411 2903 2267 461 225 0 0 chr5 80738200 80738289 -122347243 + MIR SINE MIR 60 148 -114 388 245 57 11 chr5 80738441 80738572 -122346960 + MIR SINE MIR 20 153 -62 229 249 177 34 chr5 80739537 80739746 -122345786 + L1ME LINE L1 5689 5927 -194 308 318 169 14 chr5 80740007 80740155 -122345377 - MIR SINE MIR -78 184 14 1583 138 4 4 chr5 80740437 80740668 -122344864 + AluSx SINE Alu 36 266 -46 2320 117 0 0 chr5 80740768 80741077 -122344455 + AluSg SINE Alu 1 309 -1 261 340 14 35 chr5 80741725 80741871 -122343661 + MIR3 SINE MIR 34 178 -30 510 242 142 21 chr5 80742146 80742336 -122343196 + MIR SINE MIR 20 232 -30 340 270 30 0 chr5 80743558 80743658 -122341874 + MLT1J LTR MaLR 1 103 -408 522 100 0 38 chr5 80743658 80743738 -122341794 + MER33 DNA MER1_type 1 77 -247 439 163 65 0 chr5 80743774 80743866 -122341666 + MER33 DNA MER1_type 226 323 -1 612 284 95 49 chr5 80743870 80743942 -122341590 + MLT1J LTR MaLR 99 166 -345 2265 159 11 3 chr5 80743942 80744300 -122341232 - MER46B DNA MER2_type 0 236 1 612 284 95 49 chr5 80744300 80744575 -122340957 + MLT1J LTR MaLR 166 462 -49 242 335 62 56 chr5 80744735 80745075 -122340457 - L2 LINE L2 -341 2973 2632 206 206 0 0 chr5 80745473 80745507 -122340025 + G-rich Low_complexity Low_complexity 2 35 0 607 237 35 0 chr5 80746039 80746179 -122339353 + FLAM_A SINE Alu 1 144 0 282 246 25 68 chr5 80746202 80746320 -122339212 + MIR SINE MIR 86 198 -64 376 245 85 9 chr5 80746507 80746613 -122338919 - MER5B DNA MER1_type -40 138 25 2995 238 89 30 chr5 80747379 80747518 -122338014 - MER97b DNA MER1_type? 0 1053 924 2024 153 0 0 chr5 80747518 80747818 -122337714 - AluJb SINE Alu -12 300 1 2995 238 89 30 chr5 80747818 80748672 -122336860 - MER97b DNA MER1_type? -129 924 1 373 269 172 8 chr5 80749351 80749485 -122336047 + MIR SINE MIR 95 250 -12 25 0 0 0 chr5 80749750 80749775 -122335757 + AT_rich Low_complexity Low_complexity 1 25 0 228 97 0 0 chr5 80750633 80750664 -122334868 - MIR SINE MIR -111 151 121 21 36 0 0 chr5 80751806 80751834 -122333698 + AT_rich Low_complexity Low_complexity 1 28 0 206 62 31 0 chr5 80752090 80752122 -122333410 + (TA)n Simple_repeat Simple_repeat 2 34 0 273 241 0 17 chr5 80752849 80752907 -122332625 + AluSg/x SINE Alu 216 272 -30 495 48 0 0 chr5 80752907 80752969 -122332563 + (TA)n Simple_repeat Simple_repeat 1 62 0 405 0 0 0 chr5 80752968 80753013 -122332519 + (CA)n Simple_repeat Simple_repeat 2 46 0 * 949 297 71 26 chr5 80753501 80753922 -122331610 + L3 LINE CR1 989 1428 -149 1787 169 3 32 chr5 80754156 80754469 -122331063 - AluJo SINE Alu -8 304 1 353 39 0 19 chr5 80754474 80754526 -122331006 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1492 204 29 0 chr5 80754544 80754818 -122330714 - AluJb SINE Alu -30 282 1 438 69 0 0 chr5 80755814 80755872 -122329660 + (CA)n Simple_repeat Simple_repeat 2 59 0 258 226 71 36 chr5 80755963 80756047 -122329485 - MIR3 SINE MIR -7 201 115 2149 93 0 17 chr5 80756538 80756915 -122328617 + AluSq SINE Alu 1 372 0 213 263 0 18 chr5 80757453 80757510 -122328022 + CT-rich Low_complexity Low_complexity 1 56 0 499 255 63 74 chr5 80757804 80758044 -122327488 - MIR SINE MIR -5 257 13 422 289 118 7 chr5 80758244 80758379 -122327153 - L2 LINE L2 0 3272 3123 185 83 0 0 chr5 80758424 80758448 -122327084 - L2 LINE L2 -257 3056 3033 299 303 0 13 chr5 80758625 80758701 -122326831 - L2 LINE L2 -554 2760 2686 203 312 43 43 chr5 80758959 80759100 -122326432 + MIR SINE MIR 116 256 -6 261 105 53 13 chr5 80759104 80759180 -122326352 + (TTAA)n Simple_repeat Simple_repeat 2 80 0 210 227 0 0 chr5 80759233 80759277 -122326255 - L2 LINE L2 -5 3308 3265 * 275 277 176 34 chr5 80759244 80759392 -122326140 - MIR SINE MIR -10 252 84 2626 134 26 0 chr5 80760196 80760584 -122324948 + MSTA LTR MaLR 3 400 -28 349 164 15 0 chr5 80760626 80760693 -122324839 - L1MC4 LINE L1 -826 7216 7149 291 197 0 16 chr5 80760693 80760707 -122324825 + MSTA LTR MaLR 367 380 -48 609 69 11 0 chr5 80760707 80760794 -122324738 - L1PB2 LINE L1 -1 6150 6063 291 197 0 16 chr5 80760794 80760840 -122324692 + MSTA LTR MaLR 380 426 -2 504 249 111 51 chr5 80760867 80761084 -122324448 + MIR SINE MIR 8 237 -25 1631 65 15 0 chr5 80761158 80761359 -122324173 + L1PB1 LINE L1 5947 6150 -1 362 258 55 61 chr5 80761569 80761732 -122323800 - L2 LINE L2 0 3313 3152 1675 128 14 48 chr5 80761758 80762047 -122323485 + L1MC1 LINE L1 5637 5915 -418 1371 134 14 9 chr5 80763309 80763526 -122322006 + AluJb SINE Alu 85 302 -10 253 244 281 7 chr5 80764052 80764187 -122321345 - MIR SINE MIR -72 190 19 732 205 30 12 chr5 80764750 80764916 -122320616 - MIR SINE MIR -34 228 60 1498 301 137 29 chr5 80765834 80766631 -122318901 + L3 LINE CR1 628 1510 -67 207 244 0 61 chr5 80766821 80766903 -122318629 - L3b LINE CR1 -168 1415 1339 318 188 62 10 chr5 80768979 80769075 -122316457 + L1ME4a LINE L1 6021 6121 0 1497 237 77 25 chr5 80769110 80769629 -122315903 + L1ME1 LINE L1 5597 6142 -24 2270 95 3 0 chr5 80770575 80770869 -122314663 + AluSc SINE Alu 1 295 -14 227 327 142 36 chr5 80771657 80771840 -122313692 + MIR SINE MIR 57 258 -4 1050 133 0 13 chr5 80772324 80772482 -122313050 + FRAM SINE Alu 1 156 -20 1595 76 0 0 chr5 80774631 80774828 -122310704 - AluY SINE Alu -11 300 104 1866 147 27 10 chr5 80775888 80776188 -122309344 + AluSx SINE Alu 1 305 -7 303 281 21 42 chr5 80776341 80776437 -122309095 + L2 LINE L2 3219 3312 -1 22 0 0 0 chr5 80777242 80777264 -122308268 + AT_rich Low_complexity Low_complexity 1 22 0 520 262 8 22 chr5 80778336 80778699 -122306833 + G-rich Low_complexity Low_complexity 1 358 0 233 236 140 90 chr5 80781182 80781360 -122304172 - L2 LINE L2 0 3313 3127 348 200 108 15 chr5 80781445 80781575 -122303957 - MER106B DNA MER1_type -1 1058 917 197 232 58 58 chr5 80781974 80782043 -122303489 - MIR3 SINE MIR -15 193 125 223 261 58 72 chr5 80782591 80782660 -122302872 + L2 LINE L2 3199 3266 -6 815 249 92 43 chr5 80782753 80783057 -122302475 + MER110A LTR ERV1 1 335 -133 1816 156 3 0 chr5 80783057 80783346 -122302186 + AluJb SINE Alu 1 290 -22 815 249 92 43 chr5 80783346 80783486 -122302046 + MER110A LTR ERV1 335 467 -1 2273 104 0 16 chr5 80784166 80784474 -122301058 - AluSx SINE Alu -9 303 1 963 134 30 6 chr5 80785752 80785916 -122299616 + L1MC1 LINE L1 6166 6333 0 281 238 14 49 chr5 80785952 80786095 -122299437 + L1ME3A LINE L1 5522 5659 -503 415 293 152 5 chr5 80786117 80786315 -122299217 + L1ME3A LINE L1 5725 5951 -219 180 182 0 0 chr5 80786478 80786522 -122299010 + CT-rich Low_complexity Low_complexity 1 44 0 206 200 0 0 chr5 80786522 80786557 -122298975 + (CA)n Simple_repeat Simple_repeat 2 36 0 2402 130 31 6 chr5 80786587 80786942 -122298590 - THE1B LTR MaLR 0 364 1 11584 92 19 1 chr5 80786942 80788494 -122297038 - THE1B-int LTR MaLR 0 1580 1 2214 150 31 8 chr5 80788496 80788850 -122296682 - THE1B LTR MaLR -2 362 1 301 277 0 90 chr5 80788856 80789011 -122296521 - L1ME LINE L1 -503 5659 5519 499 348 6 0 chr5 80789013 80789177 -122296355 + MER5B DNA MER1_type 13 177 -1 2198 82 0 7 chr5 80789534 80789864 -122295668 - AluY SINE Alu 0 328 1 261 253 192 20 chr5 80789990 80790089 -122295443 - L2 LINE L2 -2 3270 3155 401 211 0 0 chr5 80790117 80790193 -122295339 - Tigger5 DNA MER2_type 0 2323 2248 1367 199 13 65 chr5 80790201 80790508 -122295024 - Tigger5 DNA MER2_type -2031 292 2 21 0 0 0 chr5 80790734 80790755 -122294777 + AT_rich Low_complexity Low_complexity 1 21 0 180 330 20 40 chr5 80791547 80791647 -122293885 + MIR SINE MIR 94 191 -71 251 179 18 18 chr5 80792030 80792086 -122293446 - L2 LINE L2 0 3313 3258 658 304 28 18 chr5 80792726 80792943 -122292589 - MIR SINE MIR -35 227 9 601 134 0 0 chr5 80793254 80793351 -122292181 - AluSg/x SINE Alu -5 307 211 3867 228 82 42 chr5 80793812 80795084 -122290448 + L1ME1 LINE L1 3656 5054 -1112 1900 165 0 3 chr5 80795084 80795375 -122290157 + AluSx SINE Alu 1 290 -22 3867 228 82 42 chr5 80795375 80796257 -122289275 + L1ME1 LINE L1 5054 5899 -267 2215 75 180 19 chr5 80796262 80796635 -122288897 + LTR3b LTR ERVK 1 433 -4 1048 261 24 22 chr5 80796642 80797013 -122288519 + L1MC3 LINE L1 5905 6276 -1509 5069 134 24 11 chr5 80797030 80797898 -122287634 + L1PA16 LINE L1 5288 6166 0 599 184 113 98 chr5 80797919 80798185 -122287347 + L1MC4a LINE L1 6310 6579 -1229 500 213 79 16 chr5 80799469 80799596 -122285936 - L2 LINE L2 0 3313 3179 859 116 0 0 chr5 80799714 80799843 -122285689 - AluSg/x SINE Alu 0 310 182 218 255 39 0 chr5 80800566 80800617 -122284915 - L2 LINE L2 -10 3303 3251 31 33 0 33 chr5 80801339 80801363 -122284169 + AT_rich Low_complexity Low_complexity 1 24 -34 2131 132 0 0 chr5 80801363 80801650 -122283882 + AluSx SINE Alu 1 287 -25 31 33 0 33 chr5 80801650 80801685 -122283847 + AT_rich Low_complexity Low_complexity 24 58 0 2127 102 41 14 chr5 80802037 80802332 -122283200 - AluSg SINE Alu -7 303 1 243 0 0 0 chr5 80802413 80802440 -122283092 + (CA)n Simple_repeat Simple_repeat 2 28 0 1445 190 26 13 chr5 80803334 80803828 -122281704 + L1MB3 LINE L1 5442 6176 -7 2563 169 9 78 chr5 80803857 80804486 -122281046 + L1MD2 LINE L1 5431 6016 -343 1494 178 7 3 chr5 80805305 80805608 -122279924 - L1MA6 LINE L1 0 6300 5997 236 186 17 0 chr5 80806660 80806719 -122278813 + CT-rich Low_complexity Low_complexity 1 60 0 393 58 0 0 chr5 80806884 80806936 -122278596 + (CA)n Simple_repeat Simple_repeat 1 52 0 180 250 19 0 chr5 80807099 80807151 -122278381 + MIR SINE MIR 37 89 -119 274 288 129 15 chr5 80807499 80807631 -122277901 + MER69 DNA AcHobo 1 147 -2379 616 262 7 0 chr5 80807810 80807955 -122277577 + MER69 DNA AcHobo 136 281 -2245 * 670 193 108 0 chr5 80807954 80808120 -122277412 + MER69 DNA AcHobo 2343 2526 0 2161 157 61 22 chr5 80808325 80808733 -122276799 + MSTC LTR MaLR 1 424 -4 249 217 116 0 chr5 80809306 80809375 -122276157 - L2 LINE L2 -8 3305 3229 283 211 165 0 chr5 80809389 80809498 -122276034 - MER69 DNA AcHobo -29 2497 2371 434 372 5 15 chr5 80809594 80809790 -122275742 - L2 LINE L2 -224 3048 2855 243 317 0 0 chr5 80809943 80810003 -122275529 - L2 LINE L2 -4 3268 3209 444 284 53 0 chr5 80810889 80811058 -122274474 + L2 LINE L2 2807 2984 -329 244 303 99 49 chr5 80811114 80811276 -122274256 + L2 LINE L2 3124 3293 -20 193 213 75 88 chr5 80811258 80811338 -122274194 - L2 LINE L2 -1367 1947 1869 * 204 327 36 36 chr5 80812997 80813107 -122272425 + MIR3 SINE MIR 69 178 -30 411 284 41 18 chr5 80814111 80814280 -122271252 + L1MC/D LINE L1 5585 5757 -2051 970 174 7 0 chr5 80814471 80814626 -122270906 - MER5A DNA MER1_type -3 186 31 216 0 0 0 chr5 80814767 80814791 -122270741 + (TG)n Simple_repeat Simple_repeat 2 25 0 1884 145 10 7 chr5 80814860 80815149 -122270383 + AluJo SINE Alu 3 292 -20 1908 163 0 0 chr5 80815377 80815672 -122269860 - AluJb SINE Alu -17 295 1 1217 185 127 11 chr5 80815714 80815974 -122269558 + AluJo SINE Alu 1 290 -22 243 119 0 0 chr5 80818186 80818228 -122267304 + L1PB1 LINE L1 6108 6149 -2 1950 121 11 0 chr5 80819027 80819300 -122266232 + AluSx SINE Alu 34 309 -3 595 303 61 4 chr5 80821609 80821840 -122263692 - MIR SINE MIR -7 255 12 238 282 0 28 chr5 80822090 80822161 -122263371 - Charlie7 DNA MER1_type -1 2611 2543 185 137 27 27 chr5 80822614 80822687 -122262845 + (TA)n Simple_repeat Simple_repeat 2 74 0 214 284 60 30 chr5 80822761 80822828 -122262704 + L2 LINE L2 3235 3303 -10 1225 153 7 133 chr5 80822835 80823136 -122262396 + AluJo SINE Alu 21 283 -29 30 59 0 0 chr5 80823200 80823251 -122262281 + AT_rich Low_complexity Low_complexity 1 51 0 787 186 8 0 chr5 80823878 80824002 -122261530 + FLAM_C SINE Alu 1 125 -8 2077 143 0 0 chr5 80826411 80826719 -122258813 - AluSx SINE Alu -4 308 1 806 174 0 0 chr5 80828340 80828461 -122257071 - FLAM_A SINE Alu -12 121 1 26 30 0 0 chr5 80829807 80829840 -122255692 + AT_rich Low_complexity Low_complexity 1 33 0 376 303 111 40 chr5 80830816 80831268 -122254264 + L1M4 LINE L1 4561 5044 -1102 399 329 87 0 chr5 80833373 80833534 -122251998 - MIR3 SINE MIR -4 204 30 225 193 18 53 chr5 80834770 80834827 -122250705 - MIR3 SINE MIR -140 68 14 2208 104 3 3 chr5 80834853 80835152 -122250380 - AluSp SINE Alu -14 299 1 758 359 147 20 chr5 80835513 80836301 -122249231 + L3 LINE CR1 46 933 -644 2320 118 0 0 chr5 80836337 80836643 -122248889 + AluSx SINE Alu 1 306 -6 369 276 186 10 chr5 80836655 80836854 -122248678 - MIR SINE MIR -14 248 15 3371 151 50 4 chr5 80836906 80837410 -122248122 + MER1A DNA MER1_type 1 527 0 687 297 149 40 chr5 80837430 80837874 -122247658 + L3 LINE CR1 1084 1575 -2 299 197 158 0 chr5 80838623 80838699 -122246833 - MER5B DNA MER1_type -1 177 90 405 251 62 72 chr5 80839428 80839623 -122245909 - MIR3 SINE MIR -14 194 2 670 223 152 25 chr5 80839705 80839902 -122245630 - MIR SINE MIR -25 237 16 1717 165 0 33 chr5 80840697 80841000 -122244532 - AluJb SINE Alu -15 297 5 288 189 0 0 chr5 80841133 80841186 -122244346 + L2 LINE L2 3258 3310 -3 300 291 73 96 chr5 80844143 80844486 -122241046 + L1M2 LINE L1 767 1101 -5748 195 42 0 0 chr5 80845401 80845425 -122240107 + (A)n Simple_repeat Simple_repeat 1 24 0 1572 88 5 0 chr5 80845511 80845715 -122239817 + AluSx SINE Alu 1 205 -107 402 192 216 0 chr5 80846963 80847088 -122238444 + MIR SINE MIR 86 237 -25 823 204 11 28 chr5 80847305 80847486 -122238046 + MER5B DNA MER1_type 1 178 0 401 256 211 0 chr5 80847628 80847761 -122237771 - MER5A DNA MER1_type -22 167 7 184 171 0 0 chr5 80847830 80847865 -122237667 - L2 LINE L2 -5 3308 3274 1439 138 33 51 chr5 80847944 80848219 -122237313 - ORSL DNA AcHobo -1 274 5 1608 154 16 42 chr5 80848557 80848863 -122236669 - AluJo SINE Alu -14 298 1 991 156 108 0 chr5 80849093 80849279 -122236253 - MER3 DNA MER1_type -3 206 1 2096 126 9 21 chr5 80850364 80850698 -122234834 + L1M1 LINE L1 5406 5735 -565 22 35 0 0 chr5 80851336 80851365 -122234167 + AT_rich Low_complexity Low_complexity 1 29 0 541 289 46 82 chr5 80851391 80851579 -122233953 + L1ME4a LINE L1 5631 5824 -297 543 29 0 43 chr5 80851579 80851648 -122233884 + L1PA6 LINE L1 6082 6147 -7 541 289 46 82 chr5 80851648 80851957 -122233575 + L1ME4a LINE L1 5824 6110 -11 717 242 33 83 chr5 80852481 80852721 -122232811 - MLT1J LTR MaLR -13 498 271 183 173 240 106 chr5 80853811 80853915 -122231617 + MER5B DNA MER1_type 32 149 -29 * 330 241 157 0 chr5 80853833 80853916 -122231616 - MER5B DNA MER1_type -54 124 29 353 237 114 23 chr5 80854086 80854217 -122231315 - MIR SINE MIR 0 262 120 1613 160 3 32 chr5 80854252 80854565 -122230967 - AluJb SINE Alu -6 306 3 25 31 0 0 chr5 80855765 80855797 -122229735 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 80856798 80856819 -122228713 + AT_rich Low_complexity Low_complexity 1 21 0 2249 108 3 0 chr5 80856819 80857114 -122228418 - AluSx SINE Alu -16 296 1 1029 290 52 44 chr5 80857342 80857800 -122227732 + LTR67 LTR ERVL 36 497 -60 826 256 79 61 chr5 80857804 80857938 -122227594 - L2 LINE L2 -2 3311 3181 2649 105 8 3 chr5 80857938 80858291 -122227241 + THE1A LTR MaLR 1 355 0 826 256 79 61 chr5 80858291 80858547 -122226985 - L2 LINE L2 -132 3181 2914 230 253 11 69 chr5 80858825 80858912 -122226620 + LTR67 LTR ERVL 432 513 -44 816 146 0 82 chr5 80858966 80859124 -122226408 + FRAM SINE Alu 19 163 -13 1516 215 37 69 chr5 80859279 80859483 -122226049 + L1MC4a LINE L1 5097 5306 -1091 2268 93 7 10 chr5 80859483 80859785 -122225747 + AluSg SINE Alu 1 301 -9 1516 215 37 69 chr5 80859785 80860145 -122225387 + L1MC4a LINE L1 5306 5649 -748 2298 109 0 0 chr5 80860145 80860449 -122225083 + AluSx SINE Alu 1 304 -8 837 118 15 44 chr5 80860450 80860586 -122224946 + AluY SINE Alu 3 134 -177 2351 80 0 7 chr5 80860586 80860886 -122224646 + AluSp SINE Alu 1 298 -15 7350 211 79 42 chr5 80860886 80860977 -122224555 + L1MC4a LINE L1 5642 5728 -2080 2304 101 13 0 chr5 80860977 80861284 -122224248 + AluSq SINE Alu 1 311 -2 7350 211 79 42 chr5 80861284 80862134 -122223398 + L1MC4a LINE L1 5728 6545 -1263 1773 138 65 0 chr5 80862134 80862410 -122223122 + AluSg SINE Alu 1 294 -16 7350 211 79 42 chr5 80862410 80862468 -122223064 + L1MC4a LINE L1 6545 6599 -1209 291 28 0 0 chr5 80862468 80862504 -122223028 + (CA)n Simple_repeat Simple_repeat 1 36 0 7350 211 79 42 chr5 80862504 80863592 -122221940 + L1MC4a LINE L1 6599 7808 0 1692 126 16 4 chr5 80864439 80864694 -122220838 - Tigger2 DNA MER2_type 0 2718 2461 4122 143 86 7 chr5 80864743 80865445 -122220087 - Tigger2 DNA MER2_type -1961 757 1 2181 108 0 0 chr5 80866012 80866328 -122219204 + AluSx SINE Alu 1 316 0 3099 210 18 1 chr5 80866463 80867181 -122218351 + L1M4 LINE L1 3618 4347 -1799 228 236 0 36 chr5 80867177 80867232 -122218300 - L1M4 LINE L1 -2319 3827 3775 * 4323 219 25 17 chr5 80867229 80868441 -122217091 + L1MC2 LINE L1 4060 5280 -866 2250 148 23 0 chr5 80868448 80868839 -122216693 + L1MC2 LINE L1 5514 5913 -431 2157 96 3 7 chr5 80869110 80869428 -122216104 + AluSx SINE Alu 1 317 0 359 303 81 73 chr5 80869479 80869713 -122215819 - L1MEd LINE L1 -5738 381 146 205 224 90 0 chr5 80869713 80869780 -122215752 + L2 LINE L2 1925 1997 -1317 807 184 25 15 chr5 80869821 80870022 -122215510 - L1MA4 LINE L1 -5 6295 6093 2192 115 0 3 chr5 80870022 80870327 -122215205 + AluSx SINE Alu 1 304 -8 243 302 198 0 chr5 80870384 80870480 -122215052 + L2 LINE L2 2168 2282 -1032 668 211 0 0 chr5 80870485 80870608 -122214924 + MER5C DNA MER1_type 2 124 -200 2068 134 10 0 chr5 80870844 80871150 -122214382 - AluSx SINE Alu -1 311 3 318 305 92 15 chr5 80871827 80871958 -122213574 - L1M4 LINE L1 -2317 3829 3689 1076 272 24 30 chr5 80871975 80872306 -122213226 - MLT1I LTR MaLR 0 409 81 390 335 90 28 chr5 80872496 80872851 -122212681 - L1M4 LINE L1 -2499 3647 3271 388 296 61 0 chr5 80872898 80873013 -122212519 + MIR SINE MIR 140 261 -1 2094 120 0 13 chr5 80873401 80873700 -122211832 + AluSq SINE Alu 1 295 -18 1081 122 0 0 chr5 80873905 80874053 -122211479 + AluSg/x SINE Alu 151 298 -14 300 140 40 0 chr5 80874190 80874240 -122211292 + L1MC4 LINE L1 6652 6703 -1339 225 154 0 0 chr5 80874246 80874285 -122211247 + (TG)n Simple_repeat Simple_repeat 2 40 0 1556 139 68 0 chr5 80874296 80874533 -122210999 - AluSx SINE Alu -59 253 1 1952 145 6 10 chr5 80874770 80875081 -122210451 - AluJb SINE Alu -2 310 1 435 252 50 8 chr5 80875362 80875481 -122210051 - MIR SINE MIR -60 202 79 4384 154 67 18 chr5 80875535 80876393 -122209139 + L1MA4 LINE L1 4434 5248 -1052 243 0 0 0 chr5 80876393 80876420 -122209112 + (CAT)n Simple_repeat Simple_repeat 2 28 0 4384 154 67 18 chr5 80876420 80877253 -122208279 + L1MA4 LINE L1 5248 6207 -93 1718 178 0 26 chr5 80877253 80877556 -122207976 + AluJo SINE Alu 2 296 -16 4384 154 67 18 chr5 80877556 80877654 -122207878 + L1MA4 LINE L1 6207 6299 -1 635 253 7 20 chr5 80878186 80878332 -122207200 + MIR SINE MIR 12 155 -107 592 296 36 7 chr5 80878518 80878795 -122206737 + L1MC4a LINE L1 5641 5925 -1883 1731 190 118 55 chr5 80879381 80879854 -122205678 + MLT2B2 LTR ERVL 1 503 -12 728 172 7 26 chr5 80881672 80881823 -122203709 + MER3 DNA MER1_type 5 152 -57 1986 148 3 13 chr5 80881846 80882157 -122203375 + AluJb SINE Alu 1 308 -4 2002 262 256 19 chr5 80883031 80884073 -122201459 + L2 LINE L2 29 1317 -1997 492 109 98 0 chr5 80884087 80884179 -122201353 + HY1 scRNA scRNA 1 101 -11 586 309 68 5 chr5 80884202 80884393 -122201139 - MIR SINE MIR -44 218 16 791 222 108 62 chr5 80884401 80884771 -122200761 + L2 LINE L2 1313 1699 -1615 938 206 62 20 chr5 80884784 80885090 -122200442 + L1ME1 LINE L1 5848 6166 0 323 273 40 0 chr5 80885090 80885189 -122200343 + L2 LINE L2 1714 1816 -1498 764 268 197 18 chr5 80885202 80885587 -122199945 + L2 LINE L2 2843 3296 -17 1617 191 3 16 chr5 80886463 80886778 -122198754 + AluJo SINE Alu 2 312 0 200 313 88 0 chr5 80886983 80887063 -122198469 + MIR SINE MIR 116 202 -60 2042 135 14 3 chr5 80887800 80888096 -122197436 + AluSx SINE Alu 1 299 -13 191 365 71 16 chr5 80890833 80890959 -122194573 + MIR SINE MIR 75 207 -55 2286 105 7 0 chr5 80892438 80892733 -122192799 + AluSq SINE Alu 1 297 -16 2075 142 0 13 chr5 80892805 80893121 -122192411 + AluSx SINE Alu 1 312 0 2217 99 7 10 chr5 80893187 80893491 -122192041 + AluSp SINE Alu 1 303 -10 779 159 0 43 chr5 80893515 80893653 -122191879 + FLAM_C SINE Alu 2 133 0 878 200 57 24 chr5 80893689 80893899 -122191633 - MER20 DNA MER1_type 0 219 3 320 239 15 0 chr5 80894060 80894127 -122191405 - MER2 DNA MER2_type 0 345 278 839 108 29 0 chr5 80894155 80894294 -122191238 - MER2 DNA MER2_type -139 206 64 1882 146 7 0 chr5 80894425 80894720 -122190812 + AluJb SINE Alu 1 297 -15 478 157 0 0 chr5 80894761 80894844 -122190688 + Charlie5 DNA MER1_type 25 107 -2505 1713 178 14 3 chr5 80894880 80895166 -122190366 - AluJo SINE Alu -18 294 6 30 27 0 0 chr5 80895259 80895296 -122190236 + AT_rich Low_complexity Low_complexity 1 37 0 2156 119 10 0 chr5 80895338 80895632 -122189900 + AluSx SINE Alu 1 297 -15 2128 130 0 0 chr5 80895663 80895962 -122189570 + AluSx SINE Alu 1 299 -13 2338 93 3 0 chr5 80896115 80896416 -122189116 + AluSg SINE Alu 1 302 -8 21 36 0 0 chr5 80896551 80896579 -122188953 + AT_rich Low_complexity Low_complexity 1 28 0 250 233 83 0 chr5 80896888 80896948 -122188584 + MIR SINE MIR 145 209 -53 22 56 0 0 chr5 80896990 80897026 -122188506 + AT_rich Low_complexity Low_complexity 1 36 0 317 241 147 17 chr5 80897231 80897347 -122188185 - MIR3 SINE MIR -48 160 30 837 119 0 70 chr5 80897413 80897556 -122187976 - FLAM_C SINE Alu 0 133 1 369 254 219 24 chr5 80898141 80898346 -122187186 + MIR SINE MIR 6 250 -12 1805 151 7 14 chr5 80899075 80899367 -122186165 + AluJb SINE Alu 1 290 -22 331 286 180 10 chr5 80901301 80901507 -122184025 - L1MC4a LINE L1 -1888 5920 5680 24 32 0 0 chr5 80901951 80901982 -122183550 + AT_rich Low_complexity Low_complexity 1 31 0 338 277 0 36 chr5 80902772 80902855 -122182677 - L2 LINE L2 -27 3245 3166 248 320 20 59 chr5 80902867 80903020 -122182512 + L2 LINE L2 2419 2565 -749 23 0 0 0 chr5 80903658 80903681 -122181851 + AT_rich Low_complexity Low_complexity 1 23 0 274 273 73 60 chr5 80904497 80904647 -122180885 - MIR3 SINE MIR -12 196 45 212 337 153 0 chr5 80904702 80904800 -122180732 - L2 LINE L2 -10 3262 3150 615 231 72 10 chr5 80905917 80906103 -122179429 - MIR SINE MIR -53 209 16 2256 127 0 0 chr5 80906884 80907192 -122178340 + AluSx SINE Alu 1 308 -4 2314 81 3 3 chr5 80907420 80907716 -122177816 - AluSx SINE Alu -16 296 1 2728 126 24 50 chr5 80908164 80908515 -122177017 + L1MA7 LINE L1 5764 6098 -193 1756 153 0 77 chr5 80908515 80908842 -122176690 + AluJb SINE Alu 1 302 -10 2728 126 24 50 chr5 80908842 80909031 -122176501 + L1MA7 LINE L1 6098 6290 -1 1696 170 11 28 chr5 80909137 80909420 -122176112 + AluJo SINE Alu 1 278 -34 22 56 0 0 chr5 80909537 80909573 -122175959 + AT_rich Low_complexity Low_complexity 1 36 0 235 287 186 16 chr5 80910226 80910355 -122175177 - MIR3 SINE MIR -10 198 48 1894 142 14 7 chr5 80910367 80910668 -122174864 + AluJb SINE Alu 1 303 0 763 146 0 23 chr5 80910920 80911050 -122174482 + FLAM_C SINE Alu 1 127 -6 2032 112 0 0 chr5 80911138 80911405 -122174127 - AluSx SINE Alu -45 267 1 198 0 0 0 chr5 80911766 80911788 -122173744 + (A)n Simple_repeat Simple_repeat 1 22 0 237 248 110 35 chr5 80911928 80912073 -122173459 - L1MC4a LINE L1 -1874 5934 5779 551 291 44 32 chr5 80912133 80912384 -122173148 - L1MC4a LINE L1 -2143 5665 5412 455 321 74 34 chr5 80912485 80912809 -122172723 - L1MC4a LINE L1 -907 5239 4903 407 283 0 10 chr5 80913247 80913346 -122172186 - MIR SINE MIR -95 113 16 215 233 117 29 chr5 80913949 80914052 -122171480 - L2 LINE L2 -206 3066 2955 1136 166 0 0 chr5 80914435 80914610 -122170922 + FRAM SINE Alu 2 176 0 2084 108 24 0 chr5 80915129 80915426 -122170106 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr5 80916590 80916613 -122168919 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 80916828 80916849 -122168683 + AT_rich Low_complexity Low_complexity 1 21 0 1799 129 18 25 chr5 80917634 80917912 -122167620 + AluSx SINE Alu 1 276 -36 1197 188 47 8 chr5 80918243 80918477 -122167055 + MLT2B3 LTR ERVL 312 554 0 571 167 109 36 chr5 80918997 80919135 -122166397 - LTR37B LTR ERV1 -8 460 313 577 191 133 70 chr5 80920473 80920646 -122164886 - LTR37B LTR ERV1 -162 306 112 2260 122 0 0 chr5 80920646 80920950 -122164582 + AluSx SINE Alu 1 304 -8 577 191 133 70 chr5 80920950 80921017 -122164515 - LTR37B LTR ERV1 -356 112 51 1657 185 3 26 chr5 80921687 80921822 -122163710 + AluJo SINE Alu 1 138 -174 2536 60 0 10 chr5 80921822 80922136 -122163396 + AluY SINE Alu 1 311 0 1657 185 3 26 chr5 80922136 80922303 -122163229 + AluJo SINE Alu 138 296 -16 26 0 0 67 chr5 80923076 80923097 -122162435 + AT_rich Low_complexity Low_complexity 1 19 -23 2175 58 0 0 chr5 80923097 80923354 -122162178 + AluY SINE Alu 55 311 0 26 0 0 67 chr5 80923354 80923377 -122162155 + AT_rich Low_complexity Low_complexity 19 42 0 376 265 20 0 chr5 80923571 80923673 -122161859 - L2 LINE L2 0 3272 3169 602 253 54 0 chr5 80923898 80924064 -122161468 - MER5B DNA MER1_type -3 175 1 186 209 60 75 chr5 80924872 80924939 -122160593 - L3 LINE CR1 -122 1455 1390 475 256 15 23 chr5 80924995 80925128 -122160404 - LTR29 LTR ERV1 -364 258 127 616 282 147 48 chr5 80925225 80925644 -122159888 - L1MC/D LINE L1 -2072 5713 5267 322 241 161 40 chr5 80925766 80925810 -122159722 - MLT1K LTR MaLR -18 570 533 1593 162 19 42 chr5 80925810 80925938 -122159594 + AluJb SINE Alu 1 130 -182 2249 100 3 25 chr5 80925938 80926258 -122159274 - AluSq SINE Alu 0 313 1 1593 162 19 42 chr5 80926258 80926438 -122159094 + AluJb SINE Alu 130 302 -10 322 241 161 40 chr5 80926438 80926567 -122158965 - MLT1K LTR MaLR -55 533 376 462 114 0 0 chr5 80926668 80926747 -122158785 + (TC)n Simple_repeat Simple_repeat 2 80 0 351 0 0 0 chr5 80926747 80926786 -122158746 + (CA)n Simple_repeat Simple_repeat 1 39 0 227 235 20 0 chr5 80926792 80926843 -122158689 - MLT1K LTR MaLR -360 228 177 495 0 0 0 chr5 80927603 80927658 -122157874 + (TG)n Simple_repeat Simple_repeat 2 56 0 392 321 101 6 chr5 80927841 80928000 -122157532 + LTR67 LTR ERVL 115 288 -269 293 264 136 0 chr5 80928096 80928206 -122157326 + LTR67 LTR ERVL 433 557 0 206 250 0 15 chr5 80928318 80928386 -122157146 + CT-rich Low_complexity Low_complexity 2 68 0 214 48 0 71 chr5 80928737 80928779 -122156753 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 1864 163 7 0 chr5 80929706 80930001 -122155531 + AluSx SINE Alu 1 297 -15 1823 178 0 10 chr5 80930547 80930856 -122154676 - AluJb SINE Alu -6 306 1 2242 116 3 3 chr5 80930992 80931302 -122154230 + AluSx SINE Alu 1 310 -2 2158 125 7 0 chr5 80931302 80931597 -122153935 + AluSq SINE Alu 1 297 -16 245 224 187 65 chr5 80931676 80931783 -122153749 - MIR SINE MIR -121 141 22 399 183 75 43 chr5 80932189 80932282 -122153250 + HsTC2 DNA Tc2 28 123 -1775 671 39 0 0 chr5 80932330 80932407 -122153125 + AluS SINE Alu 2 78 -234 927 170 18 36 chr5 80932407 80932572 -122152960 - AluJo SINE Alu -150 162 1 1829 201 37 66 chr5 80932701 80933038 -122152494 - MLT1D LTR MaLR -5 500 182 2430 80 3 0 chr5 80933038 80933339 -122152193 + AluSp SINE Alu 1 302 -11 1829 201 37 66 chr5 80933339 80933514 -122152018 - MLT1D LTR MaLR -323 182 3 313 290 160 15 chr5 80934234 80934365 -122151167 - MER76 LTR ERV -32 656 507 4473 136 69 6 chr5 80934371 80935050 -122150482 + MER72 LTR ERV1 1 722 0 2925 124 53 19 chr5 80935150 80935312 -122150220 - LTR29 LTR ERV1 0 622 467 4070 169 37 41 chr5 80935312 80935676 -122149856 - MER4E LTR ERV1 0 779 415 2237 107 0 0 chr5 80935676 80935966 -122149566 - AluSq SINE Alu -23 290 1 4070 169 37 41 chr5 80935966 80936383 -122149149 - MER4E LTR ERV1 -364 415 1 2925 124 53 19 chr5 80936383 80936607 -122148925 - LTR29 LTR ERV1 -155 467 215 224 30 30 0 chr5 80936607 80936640 -122148892 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2925 124 53 19 chr5 80936640 80936727 -122148805 - LTR29 LTR ERV1 -407 215 132 844 168 37 86 chr5 80936734 80936763 -122148769 - MER4C LTR ERV1 -19 446 417 1871 129 58 89 chr5 80936763 80937111 -122148421 + MER1B DNA MER1_type 1 337 0 844 168 37 86 chr5 80937111 80937357 -122148175 - MER4C LTR ERV1 -48 417 276 853 238 29 120 chr5 80937369 80937473 -122148059 - MER41E LTR ERV1 0 512 400 934 128 0 57 chr5 80937473 80937614 -122147918 + FLAM_C SINE Alu 1 133 0 853 238 29 120 chr5 80937614 80937891 -122147641 - MER41E LTR ERV1 -112 400 166 1591 135 21 84 chr5 80938018 80938352 -122147180 - MER4A LTR ERV1 -351 313 1 3229 136 22 80 chr5 80938493 80938858 -122146674 - LTR59 LTR ERV1 -7 590 274 1684 155 0 15 chr5 80938858 80939122 -122146410 - AluJo SINE Alu -17 295 36 3229 136 22 80 chr5 80939122 80939382 -122146150 - LTR59 LTR ERV1 -323 274 1 3970 224 89 66 chr5 80940200 80941648 -122143884 - HAL1 LINE L1 -5 2502 1007 2343 90 6 0 chr5 80941648 80941959 -122143573 - AluSq SINE Alu 0 313 1 3970 224 89 66 chr5 80941959 80942198 -122143334 - HAL1 LINE L1 -1500 1007 775 450 355 54 9 chr5 80942318 80942653 -122142879 - HAL1 LINE L1 -1996 511 162 2308 109 0 0 chr5 80942657 80942959 -122142573 - AluSx SINE Alu -10 302 1 2277 104 7 0 chr5 80944274 80944573 -122140959 + AluSp SINE Alu 1 301 -12 297 269 130 0 chr5 80944629 80944737 -122140795 + MIR SINE MIR 86 207 -55 996 173 51 57 chr5 80944965 80945292 -122140240 + MER31B LTR ERV1 1 440 -26 2792 142 29 2 chr5 80945292 80945707 -122139825 + MSTB LTR MaLR 1 426 0 996 173 51 57 chr5 80945707 80945734 -122139798 + MER31B LTR ERV1 440 466 0 2186 113 7 3 chr5 80946441 80946732 -122138800 - AluSx SINE Alu -20 292 1 294 315 26 18 chr5 80946782 80946907 -122138625 - MIR SINE MIR -64 144 33 2309 109 3 0 chr5 80946970 80947272 -122138260 - AluSq SINE Alu -10 303 1 359 262 71 0 chr5 80947680 80947764 -122137768 + MIR3 SINE MIR 86 175 -33 1630 217 16 40 chr5 80948103 80948477 -122137055 - MLT1A1 LTR MaLR 0 365 1 452 249 29 0 chr5 80948972 80949101 -122136431 + MIR SINE MIR 40 170 -64 348 188 0 0 chr5 80949509 80949578 -122135954 + (TG)n Simple_repeat Simple_repeat 2 70 0 378 133 33 0 chr5 80949880 80949940 -122135592 + MSTD LTR MaLR 1 62 -334 * 1018 101 20 20 chr5 80949930 80950078 -122135454 + MSTD LTR MaLR 249 396 0 2222 95 0 0 chr5 80950244 80950557 -122134975 + AluY SINE Alu 1 313 0 226 203 0 72 chr5 80950641 80950710 -122134822 + Charlie7 DNA MER1_type 42 105 -2507 * 234 124 78 116 chr5 80950684 80950813 -122134719 + Charlie7 DNA MER1_type 2413 2536 -76 28 0 0 0 chr5 80950826 80950854 -122134678 + AT_rich Low_complexity Low_complexity 1 28 0 2191 108 0 3 chr5 80950854 80951142 -122134390 - AluSx SINE Alu -25 287 1 227 149 21 21 chr5 80951169 80951216 -122134316 + Charlie7 DNA MER1_type 2565 2611 -1 286 293 18 44 chr5 80951225 80951386 -122134146 + MER5A DNA MER1_type 1 167 -22 287 308 115 0 chr5 80951425 80951529 -122134003 + L2 LINE L2 3157 3272 0 843 218 6 29 chr5 80951740 80951910 -122133622 + AluJo SINE Alu 126 291 -21 2018 105 14 17 chr5 80951984 80952278 -122133254 + AluSx SINE Alu 1 293 -19 447 256 144 11 chr5 80952279 80952459 -122133073 + LTR16B LTR ERVL 261 464 0 2079 91 29 0 chr5 80953294 80953591 -122131941 + AluSq SINE Alu 1 305 0 211 211 35 18 chr5 80954337 80954394 -122131138 + CT-rich Low_complexity Low_complexity 3 60 0 440 153 12 0 chr5 80956322 80956407 -122129125 + (TA)n Simple_repeat Simple_repeat 2 87 0 249 152 0 0 chr5 80956407 80956453 -122129079 - LTR66 LTR ERVL -171 439 394 301 341 65 0 chr5 80956804 80956927 -122128605 + MIR SINE MIR 16 146 -62 350 241 98 23 chr5 80957113 80957246 -122128286 + MLT1I LTR MaLR 103 245 -164 422 235 0 0 chr5 80957695 80957776 -122127756 + MER5A DNA MER1_type 9 89 -100 336 273 155 21 chr5 80957823 80958017 -122127515 + MLT1I LTR MaLR 164 383 -26 22 0 0 0 chr5 80958382 80958404 -122127128 + AT_rich Low_complexity Low_complexity 1 22 0 1280 262 82 46 chr5 80962913 80963368 -122122164 + L1MEc LINE L1 1533 1970 -4245 2856 13 0 0 chr5 80963368 80963677 -122121855 - AluYb8 SINE Alu -9 309 1 1280 262 82 46 chr5 80963677 80964377 -122121155 + L1MEc LINE L1 1970 2690 -3525 1378 119 0 5 chr5 80964501 80964686 -122120846 + AluSg SINE Alu 1 184 -126 2340 112 0 0 chr5 81164875 81165187 -121920345 - AluSx SINE Alu 0 312 1 280 306 105 40 chr5 81166710 81166834 -121918698 - L2 LINE L2 -13 3259 3128 1995 123 53 0 chr5 81167178 81167463 -121918069 - AluSx SINE Alu -12 300 1 515 286 32 40 chr5 81169090 81169342 -121916190 - Charlie8 DNA MER1_type -2142 275 26 201 154 0 0 chr5 81170815 81170854 -121914678 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 1771 157 28 14 chr5 81172210 81172497 -121913035 - AluJo SINE Alu -21 291 1 290 339 136 0 chr5 81172670 81172788 -121912744 + MIR SINE MIR 48 181 -81 458 219 245 13 chr5 81173398 81173553 -121911979 + MIR SINE MIR 67 257 -5 2124 113 14 0 chr5 81174043 81174336 -121911196 - AluSx SINE Alu -15 297 1 240 303 0 0 chr5 81174388 81174454 -121911078 + L2 LINE L2 3207 3272 0 2082 311 169 17 chr5 81174596 81175852 -121909680 - L2 LINE L2 0 3313 1848 1107 202 64 0 chr5 81176983 81177216 -121908316 - MIR SINE MIR -2 260 13 324 115 49 33 chr5 81177579 81177640 -121907892 - U7 snRNA snRNA -1 62 1 650 230 11 0 chr5 81178151 81178329 -121907203 + CT-rich Low_complexity Low_complexity 1 180 0 181 29 29 57 chr5 81178338 81178373 -121907159 + (TTTCC)n Simple_repeat Simple_repeat 1 34 0 1981 156 0 19 chr5 81178373 81178688 -121906844 - AluJb SINE Alu -2 310 2 562 216 155 105 chr5 81178743 81178952 -121906580 - MER113 DNA MER1_type? -54 467 270 2265 88 3 10 chr5 81178952 81179247 -121906285 - AluSc SINE Alu -16 293 1 562 216 155 105 chr5 81179247 81179476 -121906056 - MER113 DNA MER1_type? -251 270 7 1034 264 40 15 chr5 81179512 81179838 -121905694 - MER46C DNA MER2_type -1 337 4 2510 71 3 3 chr5 81179839 81180150 -121905382 + AluY SINE Alu 1 311 0 1851 129 65 0 chr5 81181841 81182119 -121903413 - AluSq SINE Alu -17 296 1 452 250 79 7 chr5 81182285 81182425 -121903107 + MER3 DNA MER1_type 2 151 -58 1652 88 27 11 chr5 81182521 81182783 -121902749 - L1MA1 LINE L1 0 6302 6037 2011 116 7 14 chr5 81183241 81183534 -121901998 + AluSx SINE Alu 1 291 -21 400 239 84 0 chr5 81184457 81184599 -121900933 - L1ME4a LINE L1 -4 6117 5964 180 158 0 0 chr5 81185063 81185101 -121900431 + A-rich Low_complexity Low_complexity 1 38 0 2545 58 0 3 chr5 81185601 81185913 -121899619 + AluY SINE Alu 1 311 0 441 0 0 0 chr5 81187307 81187356 -121898176 + (TG)n Simple_repeat Simple_repeat 2 50 0 2108 131 16 3 chr5 81188239 81188545 -121896987 + AluJo SINE Alu 1 310 -2 26 0 0 0 chr5 81188953 81188979 -121896553 + AT_rich Low_complexity Low_complexity 1 26 0 313 134 30 0 chr5 81189003 81189070 -121896462 - L1MC3 LINE L1 -182 7603 7535 2168 153 73 13 chr5 81189080 81189530 -121896002 - L1MC3 LINE L1 -343 7442 6966 437 170 64 0 chr5 81189633 81189727 -121895805 - L1MC3 LINE L1 -820 6965 6866 2902 181 48 14 chr5 81189736 81190384 -121895148 + L1MC3 LINE L1 6029 6698 -1087 482 81 0 91 chr5 81190730 81190928 -121894604 + (TA)n Simple_repeat Simple_repeat 1 180 0 330 191 22 34 chr5 81190929 81191018 -121894514 + L1MC4 LINE L1 6614 6701 -1341 301 67 0 67 chr5 81191019 81191094 -121894438 + (TA)n Simple_repeat Simple_repeat 1 70 0 319 147 7 67 chr5 81191210 81191511 -121894021 + (TA)n Simple_repeat Simple_repeat 1 282 0 34 79 0 0 chr5 81191516 81191592 -121893940 + AT_rich Low_complexity Low_complexity 1 76 0 2176 117 3 3 chr5 81192102 81192402 -121893130 - AluSq SINE Alu -13 300 1 41 21 0 0 chr5 81192450 81192498 -121893034 + AT_rich Low_complexity Low_complexity 1 48 0 195 184 0 0 chr5 81193440 81193478 -121892054 + CT-rich Low_complexity Low_complexity 3 40 0 916 155 12 14 chr5 81193587 81193846 -121891686 + AluSx SINE Alu 1 306 -6 416 288 103 16 chr5 81193933 81194117 -121891415 - MIR SINE MIR -43 219 20 414 216 14 108 chr5 81195195 81195334 -121890198 - MER5A DNA MER1_type -1 188 63 21 36 0 0 chr5 81195943 81195971 -121889561 + AT_rich Low_complexity Low_complexity 1 28 0 1819 142 8 0 chr5 81196320 81196588 -121888944 + AluSx SINE Alu 1 270 -42 327 111 37 0 chr5 81196688 81196742 -121888790 + Alu SINE Alu 244 299 -3 30 77 0 0 chr5 81198853 81198918 -121886614 + AT_rich Low_complexity Low_complexity 1 65 0 339 258 6 115 chr5 81199888 81199934 -121885598 + L1MC4 LINE L1 7852 7901 -141 189 0 0 0 chr5 81199934 81199955 -121885577 + (TA)n Simple_repeat Simple_repeat 1 21 0 339 258 6 115 chr5 81199955 81200090 -121885442 + L1MC4 LINE L1 7901 8013 -29 386 213 12 0 chr5 81200746 81200826 -121884706 - MIR3 SINE MIR 0 208 128 235 287 83 19 chr5 81200833 81200941 -121884591 - L2 LINE L2 0 3272 3158 210 154 0 0 chr5 81201688 81201727 -121883805 + T-rich Low_complexity Low_complexity 1 39 0 296 283 123 14 chr5 81202141 81202279 -121883253 - MIR SINE MIR -27 235 83 325 303 76 8 chr5 81202383 81202515 -121883017 - MIR SINE MIR -92 170 30 308 293 25 32 chr5 81204112 81204269 -121881263 + MLT1K LTR MaLR 143 298 -290 207 344 33 22 chr5 81204557 81204647 -121880885 + L2 LINE L2 2969 3059 -213 186 133 0 0 chr5 81205101 81205131 -121880401 + (A)n Simple_repeat Simple_repeat 1 30 0 577 239 42 30 chr5 81205694 81205861 -121879671 - MIR SINE MIR -10 252 84 2183 106 3 3 chr5 81206239 81206540 -121878992 - AluSp SINE Alu -12 301 1 1984 130 76 17 chr5 81208188 81208542 -121876990 - THE1C LTR MaLR 0 375 1 3010 122 40 4 chr5 81208593 81209092 -121876440 - L1MA9 LINE L1 0 6312 5796 357 62 0 0 chr5 81209092 81209140 -121876392 + (TG)n Simple_repeat Simple_repeat 1 48 0 1778 161 35 0 chr5 81209159 81209476 -121876056 + MER7A DNA MER2_type 21 346 0 3895 157 57 25 chr5 81209481 81209735 -121875797 + MER21B LTR ERV1 62 306 -557 2565 44 3 0 chr5 81209735 81210030 -121875502 + AluY SINE Alu 1 296 -15 3895 157 57 25 chr5 81210030 81210532 -121875000 + MER21B LTR ERV1 306 842 -21 3984 162 35 36 chr5 81210565 81211036 -121874496 - L1MA9 LINE L1 -503 5788 5318 183 100 0 0 chr5 81211036 81211066 -121874466 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3984 162 35 36 chr5 81211066 81212022 -121873510 - L1MA9 LINE L1 -973 5318 4378 209 100 50 0 chr5 81212231 81212271 -121873261 + CT-rich Low_complexity Low_complexity 3 44 0 1988 154 10 6 chr5 81212273 81212584 -121872948 - AluSx SINE Alu 0 312 1 2758 193 53 66 chr5 81213095 81213912 -121871620 - L1MC4 LINE L1 -46 7996 7191 1630 115 13 4 chr5 81214686 81214921 -121870611 - AluSx SINE Alu -36 276 40 523 255 38 16 chr5 81215501 81215685 -121869847 + L1ME3A LINE L1 5428 5615 -549 304 226 177 44 chr5 81215729 81215910 -121869622 + L1ME3A LINE L1 5732 5936 -234 1932 161 7 0 chr5 81215971 81216276 -121869256 + AluSx SINE Alu 1 307 -5 28 48 0 0 chr5 81216466 81216508 -121869024 + AT_rich Low_complexity Low_complexity 1 42 0 1909 142 0 26 chr5 81217244 81217554 -121867978 + AluSx SINE Alu 1 302 -10 299 220 99 0 chr5 81218614 81218705 -121866827 + MER112 DNA MER1_type 128 227 -33 2399 89 3 0 chr5 81219672 81219975 -121865557 - AluY SINE Alu -7 304 1 1830 156 30 3 chr5 81220374 81220676 -121864856 + AluJb SINE Alu 3 312 0 204 40 0 0 chr5 81221690 81221715 -121863817 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr5 81221990 81222011 -121863521 + AT_rich Low_complexity Low_complexity 1 21 0 243 224 79 0 chr5 81224286 81224362 -121861170 - L1ME3A LINE L1 -5 6165 6084 22 35 0 0 chr5 81224481 81224510 -121861022 + AT_rich Low_complexity Low_complexity 1 29 0 226 264 38 0 chr5 81224814 81224867 -121860665 + L2 LINE L2 3255 3309 -4 325 218 13 0 chr5 81228338 81228416 -121857116 - MIR SINE MIR 0 262 184 31 0 0 0 chr5 81228518 81228549 -121856983 + AT_rich Low_complexity Low_complexity 1 31 0 2153 117 0 3 chr5 81229209 81229507 -121856025 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr5 81230020 81230044 -121855488 + AT_rich Low_complexity Low_complexity 1 24 0 2237 114 0 0 chr5 81230110 81230407 -121855125 + AluSq SINE Alu 1 297 -16 232 310 0 35 chr5 81231221 81231308 -121854224 - MIR3 SINE MIR -18 190 107 258 192 0 0 chr5 81232007 81232059 -121853473 + (CA)n Simple_repeat Simple_repeat 2 53 0 1751 238 200 16 chr5 81232865 81233736 -121851796 + L2 LINE L2 2266 3313 0 190 433 27 0 chr5 81235047 81235197 -121850335 + L2 LINE L2 2554 2707 -607 959 147 0 0 chr5 81235920 81236063 -121849469 - AluSg/x SINE Alu -35 277 135 316 269 70 13 chr5 81236104 81236260 -121849272 - L1ME LINE L1 -344 5777 5613 361 263 137 65 chr5 81236642 81236904 -121848628 - L1ME LINE L1 -3666 2480 2200 365 310 27 22 chr5 81237457 81237641 -121847891 - HAL1b LINE L1 -820 528 344 923 214 5 0 chr5 81239631 81239818 -121845714 - MER5A DNA MER1_type -1 188 1 393 297 172 20 chr5 81241005 81241308 -121844224 - HsTC2 DNA Tc2 -1055 843 495 275 232 51 65 chr5 81241447 81241585 -121843947 - HsTC2 DNA Tc2 -1760 138 3 2141 117 0 0 chr5 81243128 81243419 -121842113 - AluSx SINE Alu -21 291 1 2254 92 7 3 chr5 81244098 81244391 -121841141 + AluSx SINE Alu 1 294 -18 428 284 35 36 chr5 81244716 81244865 -121840667 + MIR SINE MIR 4 150 -62 245 152 0 0 chr5 81244865 81244911 -121840621 - MADE1 DNA Mariner -34 46 1 221 273 35 77 chr5 81245702 81245845 -121839687 + MIR SINE MIR 93 229 -33 1892 149 27 10 chr5 81246077 81246943 -121838589 - L1MB7 LINE L1 -19 6165 5173 394 220 127 17 chr5 81247846 81247964 -121837568 + L2 LINE L2 3180 3310 -3 2930 177 38 1 chr5 81248197 81248865 -121836667 - L1MC/D LINE L1 -548 5811 5099 42476 38 0 2 chr5 81248885 81255042 -121830490 - L1PA3 LINE L1 0 6155 12 1517 237 92 39 chr5 81255038 81255124 -121830408 - L1MC/D LINE L1 -1036 5110 5030 * 1851 152 3 17 chr5 81255124 81255421 -121830111 + AluJb SINE Alu 2 294 -18 1517 237 92 39 chr5 81255421 81256027 -121829505 - L1MC/D LINE L1 -1116 5030 4381 21 0 0 0 chr5 81256773 81256794 -121828738 + AT_rich Low_complexity Low_complexity 1 21 0 468 248 186 3 chr5 81257385 81257707 -121827825 - L1MC5 LINE L1 -171 7790 7410 415 284 0 46 chr5 81258851 81258960 -121826572 + L2 LINE L2 3150 3253 -19 214 209 239 0 chr5 81259115 81259182 -121826350 + MIR SINE MIR 60 142 -120 250 91 0 0 chr5 81259443 81259487 -121826045 + ORSL DNA AcHobo 161 204 -71 454 186 62 8 chr5 81259502 81259631 -121825901 - ORSL DNA AcHobo -117 158 23 1269 186 0 14 chr5 81259948 81260169 -121825363 - AluJb SINE Alu -10 302 85 642 230 17 29 chr5 81261171 81261345 -121824187 - MER5B DNA MER1_type -6 172 1 198 244 174 0 chr5 81263732 81263818 -121821714 + L2 LINE L2 3161 3261 -52 303 257 61 88 chr5 81264711 81264812 -121820720 + MIR3 SINE MIR 54 151 -57 437 270 51 51 chr5 81264812 81264990 -121820542 - MER5B DNA MER1_type 0 178 1 303 257 61 88 chr5 81264990 81265036 -121820496 + MIR3 SINE MIR 151 197 -11 317 326 23 31 chr5 81265286 81265415 -121820117 - MIR SINE MIR -62 146 19 1272 267 74 14 chr5 81265737 81266353 -121819179 - L2 LINE L2 -7 3306 2646 724 294 12 40 chr5 81266357 81266759 -121818773 - L2 LINE L2 -2511 803 413 361 264 11 0 chr5 81266816 81266907 -121818625 + MER58 DNA MER1_type 180 271 -2149 283 200 67 0 chr5 81266911 81266971 -121818561 + MER58 DNA MER1_type 2357 2420 0 349 277 11 11 chr5 81266974 81267068 -121818464 - MIR3 SINE MIR -6 202 109 929 307 129 15 chr5 81267109 81267820 -121817712 - L2 LINE L2 0 3313 2496 321 259 19 56 chr5 81268485 81268593 -121816939 - MER5A DNA MER1_type -27 162 59 455 219 22 48 chr5 81268821 81269009 -121816523 - MER58C DNA MER1_type -4 211 33 251 140 20 0 chr5 81269659 81269709 -121815823 + CT-rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr5 81269825 81269847 -121815685 + AT_rich Low_complexity Low_complexity 1 22 0 247 258 137 65 chr5 81274479 81274603 -121810929 - L2 LINE L2 -19 3294 3162 235 250 18 18 chr5 81275211 81275267 -121810265 - MIR SINE MIR -70 138 83 268 308 65 19 chr5 81275990 81276097 -121809435 - L2 LINE L2 -27 3245 3134 1852 134 51 57 chr5 81276152 81276487 -121809045 + MER1B DNA MER1_type 4 336 -1 261 215 54 21 chr5 81276819 81276912 -121808620 - L1ME LINE L1 -382 5739 5644 1715 143 68 10 chr5 81277343 81277636 -121807896 - AluJb SINE Alu -2 310 1 356 319 70 8 chr5 81277859 81278216 -121807316 - L1 LINE L1 -1718 4428 4050 2501 80 0 0 chr5 81281215 81281526 -121804006 + AluSq SINE Alu 1 311 -2 837 224 83 0 chr5 81285298 81285503 -121800029 - MIR SINE MIR -37 225 4 2201 120 0 0 chr5 81285515 81285814 -121799718 - AluSx SINE Alu -11 301 3 1500 161 16 69 chr5 81285854 81286159 -121799373 - AluJb SINE Alu -23 289 1 2137 116 65 14 chr5 81287484 81287855 -121797677 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr5 81288015 81288043 -121797489 + AT_rich Low_complexity Low_complexity 1 28 0 804 193 40 6 chr5 81289285 81289461 -121796071 - MER58A DNA MER1_type -1 223 42 227 356 44 31 chr5 81289912 81290072 -121795460 - MER5A DNA MER1_type -3 186 25 217 245 235 20 chr5 81290105 81290203 -121795329 + MIR SINE MIR 28 146 -116 411 317 14 35 chr5 81291004 81291149 -121794383 + L2 LINE L2 3171 3312 -1 883 62 0 0 chr5 81291553 81291665 -121793867 - L1PA8 LINE L1 -9 6163 6052 917 73 0 8 chr5 81291665 81291789 -121793743 - AluY SINE Alu -10 301 179 321 62 0 21 chr5 81291789 81291837 -121793695 - L1PA8 LINE L1 -107 6065 6019 189 207 61 134 chr5 81293351 81293433 -121792099 - L2 LINE L2 -2080 1234 1159 700 292 38 17 chr5 81295382 81295618 -121789914 + MIR SINE MIR 1 241 -21 283 362 30 47 chr5 81296356 81296591 -121788941 + L2 LINE L2 2826 3056 -216 1736 234 100 0 chr5 81296613 81297144 -121788388 - L1ME2 LINE L1 -9 6155 5572 278 296 62 0 chr5 81297198 81297279 -121788253 + L2 LINE L2 3187 3272 0 1596 172 27 54 chr5 81298199 81298496 -121787036 + AluJo SINE Alu 1 289 -23 647 200 0 0 chr5 81298663 81298778 -121786754 - FLAM_A SINE Alu -18 115 1 1825 133 11 7 chr5 81299281 81299566 -121785966 + AluSx SINE Alu 25 310 -2 852 99 0 0 chr5 81300050 81300184 -121785348 - AluY SINE Alu 0 305 172 684 190 86 88 chr5 81300294 81300667 -121784865 - L1MC5 LINE L1 -52 7909 7538 487 289 107 44 chr5 81301133 81301542 -121783990 - L1ME LINE L1 -364 5757 5328 1317 258 93 56 chr5 81301927 81302945 -121782587 - HAL1 LINE L1 -577 1930 875 314 230 9 80 chr5 81302947 81303060 -121782472 + MIR SINE MIR 152 256 -6 306 241 121 19 chr5 81303552 81303659 -121781873 - MIR3 SINE MIR -48 160 43 2677 29 0 6 chr5 81303917 81304230 -121781302 - AluY SINE Alu 0 311 1 900 203 103 56 chr5 81304749 81305157 -121780375 - L1MC5 LINE L1 -54 7907 7481 685 223 46 36 chr5 81305248 81305551 -121779981 - L1MC5 LINE L1 -393 7415 7244 316 281 94 0 chr5 81305823 81305951 -121779581 - MER103 DNA DNA -19 147 8 315 219 177 10 chr5 81307681 81307777 -121777755 - MIR3 SINE MIR -12 196 85 898 117 16 8 chr5 81307855 81307983 -121777549 - FLAM_C SINE Alu -12 131 3 414 0 0 0 chr5 81309278 81309324 -121776208 + (CA)n Simple_repeat Simple_repeat 1 46 0 180 179 0 0 chr5 81310055 81310094 -121775438 + T-rich Low_complexity Low_complexity 1 39 0 214 318 71 0 chr5 81310266 81310351 -121775181 + MIR SINE MIR 57 147 -61 32 0 0 0 chr5 81311008 81311040 -121774492 + AT_rich Low_complexity Low_complexity 1 32 0 2109 159 14 35 chr5 81314003 81314373 -121771159 + MLT1A1 LTR MaLR 1 362 -3 832 254 145 0 chr5 81314910 81315138 -121770394 + MIR SINE MIR 2 262 0 198 281 0 35 chr5 81315329 81315386 -121770146 - L2 LINE L2 0 3313 3259 1028 181 222 33 chr5 81315631 81315991 -121769541 + MSTC LTR MaLR 1 428 0 212 235 107 134 chr5 81316908 81316967 -121768565 + MIR SINE MIR 106 165 -97 1878 79 0 0 chr5 81316967 81317228 -121768304 + AluSq SINE Alu 57 317 0 212 235 107 134 chr5 81317228 81317316 -121768216 + MIR SINE MIR 165 250 -12 225 0 0 0 chr5 81318709 81318734 -121766798 + (T)n Simple_repeat Simple_repeat 1 25 0 185 0 40 0 chr5 81320383 81320408 -121765124 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1546 142 12 0 chr5 81321262 81321502 -121764030 - MLT1A1 LTR MaLR 0 365 123 1442 149 126 6 chr5 81321503 81321832 -121763700 - MER39 LTR ERV1 -294 359 3 327 275 22 22 chr5 81321834 81321925 -121763607 + MER20B DNA MER1_type 73 163 -620 204 202 146 56 chr5 81322882 81322971 -121762561 + MIR SINE MIR 111 207 -55 2621 48 0 0 chr5 81323116 81323425 -121762107 + AluY SINE Alu 1 309 -2 733 207 124 55 chr5 81324639 81324792 -121760740 + MIR SINE MIR 12 186 -76 1761 166 26 57 chr5 81324792 81325177 -121760355 + MLT1A2 LTR MaLR 2 374 0 733 207 124 55 chr5 81325177 81325240 -121760292 + MIR SINE MIR 186 243 -19 23 0 0 0 chr5 81326971 81326994 -121758538 + AT_rich Low_complexity Low_complexity 1 23 0 614 262 156 22 chr5 81327312 81327537 -121757995 - MIR SINE MIR -7 255 1 537 281 22 28 chr5 81327690 81327788 -121757744 - MIR SINE MIR 0 262 163 2411 57 7 0 chr5 81327788 81328095 -121757437 - AluY SINE Alu 0 309 1 537 281 22 28 chr5 81328095 81328173 -121757359 - MIR SINE MIR -99 163 86 312 49 24 0 chr5 81328180 81328221 -121757311 - MER116 DNA Mariner 0 80 39 2882 130 4 39 chr5 81329194 81329655 -121755877 - MER65A LTR ERV1 0 445 1 463 313 119 5 chr5 81330541 81330742 -121754790 + MIR SINE MIR 26 249 -13 203 125 25 0 chr5 81330745 81330785 -121754747 + (ATG)n Simple_repeat Simple_repeat 1 41 0 2027 74 99 7 chr5 81330860 81331143 -121754389 - AluSg1 SINE Alu 0 309 1 264 234 21 32 chr5 81333157 81333251 -121752281 - Charlie8 DNA MER1_type -2269 148 56 378 310 59 16 chr5 81334714 81334901 -121750631 + MIR SINE MIR 36 230 -32 230 333 42 42 chr5 81335499 81335619 -121749913 + L3b LINE CR1 1464 1583 0 444 19 0 0 chr5 81335634 81335687 -121749845 + (GA)n Simple_repeat Simple_repeat 2 54 0 517 270 19 79 chr5 81336094 81336309 -121749223 - MIR SINE MIR 0 262 61 346 241 0 36 chr5 81336437 81336520 -121749012 - MER116 DNA Mariner 0 80 1 338 174 0 70 chr5 81337494 81337580 -121747952 + MLT1L LTR MaLR 15 94 -521 2625 119 111 5 chr5 81338547 81338934 -121746598 + MSTA LTR MaLR 1 428 0 628 297 35 5 chr5 81339588 81339790 -121745742 - MIR SINE MIR -21 241 34 189 0 0 0 chr5 81340894 81340915 -121744617 + (A)n Simple_repeat Simple_repeat 1 21 0 528 210 113 24 chr5 81341325 81341449 -121744083 + FLAM_A SINE Alu 6 140 -2 2176 101 0 0 chr5 81343498 81343774 -121741758 - AluSg SINE Alu -34 276 1 732 170 78 7 chr5 81343855 81343996 -121741536 - MER5A DNA MER1_type 0 189 39 2218 169 11 14 chr5 81344015 81344381 -121741151 - MLT1A1 LTR MaLR 0 365 1 1958 206 50 18 chr5 81344381 81344809 -121740723 + MLT1C LTR MaLR 23 467 0 227 234 0 0 chr5 81344809 81344856 -121740676 - MER5A DNA MER1_type -141 48 2 443 286 109 14 chr5 81345233 81345443 -121740089 + L3b LINE CR1 1199 1428 -155 2279 106 0 3 chr5 81345774 81346076 -121739456 - AluSg SINE Alu -9 301 1 1506 260 164 14 chr5 81346133 81346645 -121738887 - MLT1E LTR MaLR -2 591 3 922 230 61 22 chr5 81346875 81347105 -121738427 + MIR SINE MIR 3 241 -21 295 217 226 0 chr5 81347453 81347559 -121737973 - MIR SINE MIR -70 192 63 267 309 150 55 chr5 81347809 81348029 -121737503 - MIR SINE MIR -20 242 2 386 305 166 7 chr5 81348694 81348852 -121736680 + MIR SINE MIR 12 206 -56 2752 137 41 12 chr5 81348852 81349268 -121736264 + MSTC LTR MaLR 1 428 0 386 305 166 7 chr5 81349268 81349317 -121736215 + MIR SINE MIR 206 246 -16 373 119 17 17 chr5 81350369 81350386 -121735146 + MER3 DNA MER1_type 32 48 -161 693 157 9 0 chr5 81350386 81350501 -121735031 - MER3 DNA MER1_type 0 209 94 271 289 149 9 chr5 81351456 81351570 -121733962 - MIR SINE MIR -117 145 16 22 0 0 0 chr5 81352105 81352127 -121733405 + AT_rich Low_complexity Low_complexity 1 22 0 288 243 21 0 chr5 81352520 81352588 -121732944 - MIR SINE MIR -68 140 65 26 0 0 0 chr5 81352757 81352783 -121732749 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 81353057 81353079 -121732453 + AT_rich Low_complexity Low_complexity 1 22 0 274 317 129 0 chr5 81353611 81353712 -121731820 - L2 LINE L2 0 3313 3200 573 257 138 93 chr5 81354333 81355022 -121730510 + L1ME4a LINE L1 5381 6100 -21 533 221 17 93 chr5 81355148 81355320 -121730212 + MER5B DNA MER1_type 1 159 -19 282 95 0 0 chr5 81357095 81357137 -121728395 + (CA)n Simple_repeat Simple_repeat 1 42 0 854 288 74 56 chr5 81357156 81357545 -121727987 - L1MC4a LINE L1 -1879 5929 5529 1599 172 54 6 chr5 81357545 81357859 -121727673 + L1MB7 LINE L1 5856 6184 0 854 288 74 56 chr5 81357859 81357917 -121727615 - L1MC4a LINE L1 -2279 5529 5474 687 283 30 89 chr5 81358883 81359005 -121726527 - MIR SINE MIR 0 262 134 1537 218 18 60 chr5 81359005 81359391 -121726141 + MLT1A2 LTR MaLR 1 370 -4 4239 105 52 3 chr5 81359391 81359973 -121725559 + MER4B LTR ERV1 1 610 0 687 283 30 89 chr5 81359973 81360118 -121725414 - MIR SINE MIR -126 136 10 286 314 127 0 chr5 81360257 81360375 -121725157 + L2 LINE L2 3136 3268 -4 1322 271 103 2 chr5 81360628 81361034 -121724498 - LTR16A LTR ERVL -3 447 1 493 296 18 62 chr5 81361677 81361903 -121723629 + MIR SINE MIR 20 235 -27 533 267 70 5 chr5 81362773 81362970 -121722562 + MIR SINE MIR 1 210 -52 740 215 56 28 chr5 81363171 81363385 -121722147 + MIR SINE MIR 36 255 -7 3892 205 74 75 chr5 81363998 81364104 -121721428 - Charlie2a DNA MER1_type -3 2859 2754 386 239 138 38 chr5 81364104 81364263 -121721269 - MER104 DNA MER2_type -1 179 5 3892 205 74 75 chr5 81364263 81364646 -121720886 - Charlie2a DNA MER1_type -108 2754 2372 651 217 86 30 chr5 81364646 81364844 -121720688 - MER3 DNA MER1_type 0 209 1 3892 205 74 75 chr5 81364844 81365132 -121720400 - Charlie2a DNA MER1_type -490 2372 2085 2276 109 0 3 chr5 81365132 81365435 -121720097 - AluSx SINE Alu -7 305 4 3892 205 74 75 chr5 81365435 81365732 -121719800 - Charlie2a DNA MER1_type -777 2085 1789 1530 166 10 52 chr5 81365732 81366022 -121719510 - AluJo SINE Alu -25 287 10 3892 205 74 75 chr5 81366022 81366486 -121719046 - Charlie2a DNA MER1_type -1073 1789 1319 22 0 0 0 chr5 81366491 81366513 -121719019 + AT_rich Low_complexity Low_complexity 1 22 0 2202 81 4 0 chr5 81366513 81366786 -121718746 - AluSg SINE Alu -36 274 1 264 234 21 32 chr5 81368800 81368894 -121716638 - Charlie8 DNA MER1_type -2269 148 56 342 312 65 16 chr5 81370363 81370549 -121714983 + MIR SINE MIR 36 230 -32 230 333 42 42 chr5 81371147 81371267 -121714265 + L3b LINE CR1 1464 1583 0 516 16 0 0 chr5 81371282 81371343 -121714189 + (GA)n Simple_repeat Simple_repeat 2 62 0 511 269 19 83 chr5 81371750 81371966 -121713566 - MIR SINE MIR 0 262 61 346 241 0 36 chr5 81372094 81372177 -121713355 - MER116 DNA Mariner 0 80 1 338 174 0 70 chr5 81373151 81373237 -121712295 + MLT1L LTR MaLR 15 94 -521 2624 111 114 8 chr5 81374204 81374591 -121710941 + MSTA LTR MaLR 1 428 0 628 297 35 5 chr5 81375245 81375447 -121710085 - MIR SINE MIR -21 241 34 541 202 113 24 chr5 81376980 81377104 -121708428 + FLAM_A SINE Alu 6 140 -2 2198 98 0 0 chr5 81379154 81379430 -121706102 - AluSg SINE Alu -34 276 1 743 163 78 7 chr5 81379511 81379652 -121705880 - MER5A DNA MER1_type 0 189 39 2218 169 11 14 chr5 81379671 81380037 -121705495 - MLT1A1 LTR MaLR 0 365 1 1968 206 50 18 chr5 81380037 81380465 -121705067 + MLT1C LTR MaLR 23 467 0 227 234 0 0 chr5 81380465 81380512 -121705020 - MER5A DNA MER1_type -141 48 2 443 286 109 14 chr5 81380889 81381099 -121704433 + L3b LINE CR1 1199 1428 -155 2293 106 0 3 chr5 81381431 81381733 -121703799 - AluSg SINE Alu -9 301 1 1467 262 164 14 chr5 81381790 81382302 -121703230 - MLT1E LTR MaLR -2 591 3 912 230 61 22 chr5 81382532 81382762 -121702770 + MIR SINE MIR 3 241 -21 295 217 226 0 chr5 81383110 81383216 -121702316 - MIR SINE MIR -70 192 63 230 192 77 19 chr5 81383436 81383488 -121702044 + L1PBb LINE L1 249 303 -5901 189 310 178 52 chr5 81383512 81383686 -121701846 - MIR SINE MIR -65 197 2 399 298 170 7 chr5 81384344 81384509 -121701023 + MIR SINE MIR 3 206 -56 2726 139 41 12 chr5 81384509 81384925 -121700607 + MSTC LTR MaLR 1 428 0 399 298 170 7 chr5 81384925 81384974 -121700558 + MIR SINE MIR 206 246 -16 324 306 27 66 chr5 81385444 81385627 -121699905 + MIR SINE MIR 87 262 0 276 89 0 0 chr5 81386833 81386878 -121698654 - AluSc SINE Alu 0 299 255 1987 106 46 46 chr5 81386971 81387273 -121698259 - AluSg SINE Alu -8 302 1 22 0 0 0 chr5 81387273 81387295 -121698237 + AT_rich Low_complexity Low_complexity 1 22 0 416 261 60 60 chr5 81387812 81388011 -121697521 - MLT1J LTR MaLR -203 308 110 366 307 25 49 chr5 81389155 81389318 -121696214 - MIR SINE MIR -96 166 8 442 241 0 11 chr5 81389770 81389857 -121695675 - MER5B DNA MER1_type -92 86 1 589 259 0 0 chr5 81389928 81390040 -121695492 - MER81 DNA DNA 0 114 3 216 328 62 16 chr5 81390887 81391015 -121694517 - MIR SINE MIR -12 250 117 234 316 74 32 chr5 81391199 81391294 -121694238 + MIR SINE MIR 3 101 -161 249 344 94 38 chr5 81391719 81392007 -121693525 - L3 LINE CR1 -3 1574 1271 228 143 0 0 chr5 81394610 81394652 -121690880 + (CA)n Simple_repeat Simple_repeat 1 42 0 828 291 80 34 chr5 81394671 81395059 -121690473 - L1MC4a LINE L1 -1879 5929 5524 1150 198 43 40 chr5 81395060 81395388 -121690144 + L1MB7 LINE L1 5856 6184 0 181 344 46 69 chr5 81396628 81396745 -121688787 - L2 LINE L2 -3 3269 3154 1963 175 54 28 chr5 81396745 81397099 -121688433 - MLT1A1 LTR MaLR -2 363 1 181 344 46 69 chr5 81397099 81397112 -121688420 - L2 LINE L2 -118 3154 3142 471 261 137 30 chr5 81397117 81397351 -121688181 + MIR SINE MIR 1 259 -3 327 270 233 23 chr5 81397781 81398034 -121687498 + L1ME LINE L1 5492 5791 -330 219 114 0 0 chr5 81398086 81398121 -121687411 + (CA)n Simple_repeat Simple_repeat 1 35 0 1753 111 4 4 chr5 81398121 81398364 -121687168 - AluSq SINE Alu -14 299 57 393 189 0 94 chr5 81398859 81398965 -121686567 - MLT1H LTR MaLR -20 529 434 374 220 73 0 chr5 81399166 81399275 -121686257 - MLT1J LTR MaLR -432 117 1 4075 78 47 2 chr5 81399361 81399890 -121685642 - MER41A LTR ERV1 0 554 2 309 26 0 0 chr5 81400736 81400774 -121684758 + (TG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 81401993 81402014 -121683518 + AT_rich Low_complexity Low_complexity 1 21 0 3416 142 218 33 chr5 81402199 81402896 -121682636 - LTR1B LTR ERV1 0 826 1 470 250 9 0 chr5 81403228 81403340 -121682192 + MER103 DNA DNA 4 116 -50 320 311 139 8 chr5 81403497 81403619 -121681913 + MIR SINE MIR 16 153 -55 9350 54 5 8 chr5 81403676 81404751 -121680781 - MER11C LTR ERVK 0 1071 1 193 204 68 0 chr5 81405259 81405303 -121680229 - L2 LINE L2 0 3313 3267 22 35 0 0 chr5 81405464 81405493 -121680039 + AT_rich Low_complexity Low_complexity 1 29 0 860 120 0 8 chr5 81405833 81405958 -121679574 - FLAM_C SINE Alu -19 124 1 380 246 126 60 chr5 81407296 81407330 -121678202 + MIR SINE MIR 68 98 -164 2592 159 164 34 chr5 81407330 81407865 -121677667 - MER6A DNA MER2_type 0 605 1 380 246 126 60 chr5 81407865 81408013 -121677519 + MIR SINE MIR 98 262 0 739 304 16 24 chr5 81408803 81409053 -121676479 - MIR SINE MIR -10 252 5 244 387 8 24 chr5 81409987 81410111 -121675421 - MIR3 SINE MIR -13 195 74 462 201 121 40 chr5 81410161 81410335 -121675197 - L1ME4a LINE L1 -3 6118 5931 496 231 82 7 chr5 81410427 81410574 -121674958 - L1ME4a LINE L1 -3 6118 5961 5504 233 54 30 chr5 81411156 81411588 -121673944 - L1MEc LINE L1 -1150 5065 4645 271 149 0 0 chr5 81411588 81411635 -121673897 + MADE1 DNA Mariner 1 47 -33 5504 233 54 30 chr5 81411635 81412184 -121673348 - L1MEc LINE L1 -1570 4645 4111 210 37 0 0 chr5 81412184 81412211 -121673321 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5504 233 54 30 chr5 81412211 81412306 -121673226 - L1MEc LINE L1 -2104 4111 4020 2630 177 49 40 chr5 81412306 81412855 -121672677 - MLT2B3 LTR ERVL 0 554 1 5504 233 54 30 chr5 81412855 81413649 -121671883 - L1MEc LINE L1 -2195 4020 3101 639 155 0 10 chr5 81413649 81413752 -121671780 - FLAM_A SINE Alu -33 109 8 5140 243 73 45 chr5 81413759 81416305 -121669227 - L1MEc LINE L1 -3105 3110 496 3039 112 9 5 chr5 81416305 81416751 -121668781 - L1PA16 LINE L1 -11 6155 5708 5140 243 73 45 chr5 81416751 81417224 -121668308 - L1MEc LINE L1 -5719 496 38 361 289 64 17 chr5 81417331 81417504 -121668028 - L1ME4a LINE L1 -2297 5488 5308 1852 153 64 19 chr5 81418390 81418763 -121666769 - MLT1B LTR MaLR 0 390 1 1925 154 3 31 chr5 81419124 81419442 -121666090 + AluJb SINE Alu 1 309 -3 616 259 19 0 chr5 81419536 81419694 -121665838 - MER63A DNA MER1_type 0 210 50 25 83 0 0 chr5 81420194 81420254 -121665278 + AT_rich Low_complexity Low_complexity 1 60 0 360 43 0 0 chr5 81420374 81420420 -121665112 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 384 341 78 17 chr5 81420438 81420617 -121664915 - L2 LINE L2 0 3272 3083 194 375 153 19 chr5 81420710 81420926 -121664606 + L2 LINE L2 3028 3272 0 1669 156 129 9 chr5 81420971 81421154 -121664378 - MLT1A2 LTR MaLR 0 374 214 351 0 0 0 chr5 81421154 81421193 -121664339 + (GA)n Simple_repeat Simple_repeat 2 40 0 1669 156 129 9 chr5 81421193 81421343 -121664189 - MLT1A2 LTR MaLR -160 214 1 367 317 31 79 chr5 81421567 81421794 -121663738 - L2 LINE L2 -540 2774 2559 287 267 13 0 chr5 81421939 81422014 -121663518 - MIR SINE MIR -12 250 175 455 294 74 12 chr5 81423747 81423910 -121661622 + MIR3 SINE MIR 13 185 -23 299 300 36 27 chr5 81423923 81424033 -121661499 - MER5B DNA MER1_type -5 173 63 232 236 42 0 chr5 81424035 81424107 -121661425 - MER69 DNA AcHobo 0 2526 2452 * 523 216 29 36 chr5 81424105 81424244 -121661288 - MER69 DNA AcHobo -2381 145 8 266 154 64 77 chr5 81424245 81424323 -121661209 + MER5B DNA MER1_type 102 178 0 362 347 109 51 chr5 81424381 81424675 -121660857 + L2 LINE L2 2925 3235 -37 2042 162 0 0 chr5 81425014 81425323 -121660209 - AluSx SINE Alu -3 309 1 393 284 0 45 chr5 81425365 81425520 -121660012 - LTR33 LTR ERVL -354 167 20 2054 134 10 7 chr5 81426078 81426383 -121659149 - AluSx SINE Alu -6 306 1 309 336 67 0 chr5 81427325 81427444 -121658088 + L2 LINE L2 3146 3272 0 346 264 236 0 chr5 81428409 81428553 -121656979 + MIR SINE MIR 72 249 -13 255 241 37 0 chr5 81428863 81428917 -121656615 - L2 LINE L2 -96 3176 3121 490 252 98 7 chr5 81428949 81429092 -121656440 - MER5A DNA MER1_type -3 186 31 586 311 130 45 chr5 81429547 81430577 -121654955 - L2 LINE L2 -632 2682 1565 11379 85 12 4 chr5 81431739 81434115 -121651417 - L1PA7 LINE L1 -4 6150 3758 464 216 156 36 chr5 81434550 81434717 -121650815 + MIR SINE MIR 25 211 -51 2347 116 0 0 chr5 81434795 81435172 -121650360 + AluSx SINE Alu 1 377 0 719 191 115 93 chr5 81435175 81435531 -121650001 + LTR16A1 LTR ERVL 93 456 -1 322 280 152 32 chr5 81437000 81437125 -121648407 - MIR SINE MIR -108 154 15 1130 267 94 6 chr5 81437260 81437728 -121647804 - L1MC4a LINE L1 -1716 6092 5584 384 323 42 32 chr5 81438082 81438271 -121647261 + MIR SINE MIR 20 210 -52 343 119 17 17 chr5 81439602 81439619 -121645913 + MER3 DNA MER1_type 32 48 -161 633 157 9 0 chr5 81439619 81439734 -121645798 - MER3 DNA MER1_type 0 209 94 267 311 247 14 chr5 81440612 81440837 -121644695 - MIR SINE MIR -3 259 5 22 0 0 0 chr5 81441338 81441360 -121644172 + AT_rich Low_complexity Low_complexity 1 22 0 289 243 21 0 chr5 81441753 81441821 -121643711 - MIR SINE MIR -68 140 65 26 0 0 0 chr5 81441990 81442016 -121643516 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 81442290 81442312 -121643220 + AT_rich Low_complexity Low_complexity 1 22 0 186 267 23 81 chr5 81442598 81442684 -121642848 - L2 LINE L2 0 3272 3192 278 380 105 5 chr5 81442844 81443044 -121642488 - L2 LINE L2 0 3313 3094 333 274 45 32 chr5 81443183 81443340 -121642192 + L1ME4a LINE L1 5004 5162 -984 383 261 124 43 chr5 81443534 81443791 -121641741 + L1ME4a LINE L1 5381 5658 -463 273 291 42 37 chr5 81443917 81444106 -121641426 + L1ME4a LINE L1 5736 5925 -196 532 220 17 98 chr5 81444357 81444530 -121641002 + MER5B DNA MER1_type 1 159 -19 270 143 0 0 chr5 81446306 81446355 -121639177 + (CA)n Simple_repeat Simple_repeat 1 49 0 691 290 74 56 chr5 81446375 81446764 -121638768 - L1MC4a LINE L1 -1879 5929 5529 1442 172 54 6 chr5 81446764 81447078 -121638454 + L1MB7 LINE L1 5856 6184 0 691 290 74 56 chr5 81447078 81447136 -121638396 - L1MC4a LINE L1 -2279 5529 5474 692 283 30 89 chr5 81448102 81448224 -121637308 - MIR SINE MIR 0 262 134 1379 220 16 57 chr5 81448224 81448610 -121636922 + MLT1A2 LTR MaLR 1 370 -4 3936 105 52 3 chr5 81448610 81449192 -121636340 + MER4B LTR ERV1 1 610 0 692 283 30 89 chr5 81449192 81449337 -121636195 - MIR SINE MIR -126 136 10 288 314 127 0 chr5 81449476 81449594 -121635938 + L2 LINE L2 3136 3268 -4 1181 264 103 2 chr5 81449847 81450253 -121635279 - LTR16A LTR ERVL -3 447 1 499 296 18 62 chr5 81450894 81451120 -121634412 + MIR SINE MIR 20 235 -27 539 267 70 5 chr5 81451990 81452187 -121633345 + MIR SINE MIR 1 210 -52 754 215 56 28 chr5 81452388 81452602 -121632930 + MIR SINE MIR 36 255 -7 5466 219 112 62 chr5 81453216 81453322 -121632210 - Charlie2a DNA MER1_type -3 2859 2760 317 239 138 38 chr5 81453322 81453481 -121632051 - MER104 DNA MER2_type -1 179 5 5466 219 112 62 chr5 81453481 81453864 -121631668 - Charlie2a DNA MER1_type -102 2760 2397 564 217 91 35 chr5 81453864 81454062 -121631470 - MER3 DNA MER1_type 0 209 1 5466 219 112 62 chr5 81454062 81454350 -121631182 - Charlie2a DNA MER1_type -465 2397 2125 2281 109 0 3 chr5 81454350 81454653 -121630879 - AluSx SINE Alu -7 305 4 5466 219 112 62 chr5 81454653 81454950 -121630582 - Charlie2a DNA MER1_type -737 2125 1844 1557 166 10 52 chr5 81454950 81455240 -121630292 - AluJo SINE Alu -25 287 10 5466 219 112 62 chr5 81455240 81455731 -121629801 - Charlie2a DNA MER1_type -1018 1844 1379 2174 94 0 4 chr5 81455731 81456006 -121629526 - AluSg SINE Alu -36 274 1 5466 219 112 62 chr5 81456006 81457115 -121628417 - Charlie2a DNA MER1_type -1483 1379 48 1803 188 126 32 chr5 81457460 81457922 -121627610 - MLT1D LTR MaLR 0 505 1 188 224 102 0 chr5 81458110 81458159 -121627373 - L2 LINE L2 -1 3312 3259 289 270 87 43 chr5 81458964 81459079 -121626453 - MIR SINE MIR -57 151 32 217 297 136 8 chr5 81459726 81459844 -121625688 + MIR SINE MIR 118 250 -12 1610 177 22 10 chr5 81460404 81460720 -121624812 - MER33 DNA MER1_type -12 312 1 707 189 105 21 chr5 81461447 81461638 -121623894 - L1MD3 LINE L1 -2 7993 7787 336 299 70 70 chr5 81462296 81462453 -121623079 + L2 LINE L2 3100 3256 -16 1846 152 7 10 chr5 81463251 81463547 -121621985 + AluSx SINE Alu 1 295 -17 450 284 53 45 chr5 81467019 81467461 -121618071 + L1ME3A LINE L1 5152 5596 -574 322 261 142 41 chr5 81467505 81467723 -121617809 + L1ME3A LINE L1 5683 5922 -248 409 203 0 14 chr5 81467770 81467844 -121617688 + MER82 DNA MER2_type 1 73 -580 1117 140 211 101 chr5 81467884 81468192 -121617340 - MER2 DNA MER2_type -1 343 2 265 269 77 15 chr5 81468211 81468341 -121617191 - MIR SINE MIR -57 205 68 965 195 28 60 chr5 81468418 81468633 -121616899 + MER82 DNA MER2_type 446 653 0 23 0 0 0 chr5 81469003 81469026 -121616506 + AT_rich Low_complexity Low_complexity 1 23 0 2256 102 7 0 chr5 81469210 81469503 -121616029 - AluSx SINE Alu -17 295 1 186 43 0 0 chr5 81469601 81469624 -121615908 + (CA)n Simple_repeat Simple_repeat 2 24 0 591 219 0 0 chr5 81471098 81471355 -121614177 + (TG)n Simple_repeat Simple_repeat 1 257 0 476 188 7 0 chr5 81471380 81471518 -121614014 + (TG)n Simple_repeat Simple_repeat 2 140 0 406 286 141 45 chr5 81471835 81472318 -121613214 + L1ME2 LINE L1 2972 3500 -2646 523 192 103 19 chr5 81472534 81472690 -121612842 - L1MC4a LINE L1 0 7808 7640 * 2275 189 80 9 chr5 81472689 81473236 -121612296 - L1MD3 LINE L1 -478 7517 6762 450 285 84 19 chr5 81473231 81473445 -121612087 + L1ME2 LINE L1 3626 3853 -2293 * 1876 175 23 52 chr5 81473429 81473817 -121611715 + L1MB1 LINE L1 5594 5970 -219 * 2023 212 53 23 chr5 81473815 81473995 -121611537 + L1ME2 LINE L1 5362 5535 -629 3758 206 58 15 chr5 81473995 81474851 -121610681 + MER97a DNA MER1_type 1 893 -1 2023 212 53 23 chr5 81474851 81475193 -121610339 + L1ME2 LINE L1 5535 5900 -264 351 308 104 22 chr5 81475579 81475761 -121609771 + L1M4 LINE L1 4741 4937 -1209 25 65 0 0 chr5 81476137 81476183 -121609349 + AT_rich Low_complexity Low_complexity 1 46 0 2429 268 134 35 chr5 81476494 81476992 -121608540 - HAL1 LINE L1 -3 2504 2057 1393 193 0 82 chr5 81476992 81477323 -121608209 + AluJo SINE Alu 1 304 -8 2429 268 134 35 chr5 81477323 81478201 -121607331 - HAL1 LINE L1 -450 2057 992 533 208 31 11 chr5 81478212 81478353 -121607179 - MLT1J2 LTR MaLR -226 183 43 994 298 116 55 chr5 81478375 81479197 -121606335 - HAL1 LINE L1 -1633 874 3 232 196 215 51 chr5 81479212 81479370 -121606162 + L1ME4a LINE L1 5866 6049 -72 2165 111 0 3 chr5 81479400 81479697 -121605835 - AluY SINE Alu -15 296 1 1467 201 18 3 chr5 81479759 81480042 -121605490 - AluJo SINE Alu -25 287 1 21 36 0 0 chr5 81480066 81480094 -121605438 + AT_rich Low_complexity Low_complexity 1 28 0 569 256 139 19 chr5 81480237 81480452 -121605080 - MIR SINE MIR -17 245 5 239 216 81 126 chr5 81480909 81481020 -121604512 - L1P2 LINE L1 -563 5591 5486 1683 164 7 7 chr5 81481134 81481415 -121604117 - AluJo SINE Alu -31 281 1 813 142 50 7 chr5 81481641 81481782 -121603750 - L1MB8 LINE L1 -5 6173 6027 1711 158 50 74 chr5 81481783 81482187 -121603345 + L1MC3 LINE L1 6701 7094 -691 * 6482 207 109 16 chr5 81482168 81483667 -121601865 - L1M4b LINE L1 -5221 1638 1 2870 189 176 40 chr5 81483898 81484624 -121600908 + LTR1B LTR ERV1 2 826 0 2044 140 50 58 chr5 81486927 81487305 -121598227 + THE1C LTR MaLR 1 375 0 1333 108 128 0 chr5 81487485 81487689 -121597843 - MER30 DNA MER1_type 0 230 1 225 306 171 0 chr5 81488737 81488848 -121596684 + L2 LINE L2 3178 3307 -6 356 290 20 10 chr5 81491625 81491725 -121593807 - MIR3 SINE MIR -41 167 67 665 187 243 32 chr5 81491751 81492002 -121593530 + L1MC4 LINE L1 6976 7279 -763 191 352 114 11 chr5 81493911 81493999 -121591533 + L2 LINE L2 3129 3225 -47 * 479 275 170 18 chr5 81493992 81494210 -121591322 + MIR SINE MIR 5 255 -7 1972 100 50 4 chr5 81494267 81494547 -121590985 + AluSx SINE Alu 1 293 -19 24 32 0 0 chr5 81496631 81496662 -121588870 + AT_rich Low_complexity Low_complexity 1 31 0 1379 180 0 63 chr5 81497621 81497735 -121587797 + AluJb SINE Alu 21 141 -171 2381 85 0 0 chr5 81497735 81498030 -121587502 - AluY SINE Alu -16 295 1 1379 180 0 63 chr5 81498030 81498199 -121587333 + AluJb SINE Alu 141 286 -26 221 250 154 59 chr5 81498278 81498414 -121587118 + MIR SINE MIR 64 212 -50 391 133 173 0 chr5 81498507 81498582 -121586950 - MLT1A1 LTR MaLR 0 365 278 1069 283 163 31 chr5 81498747 81499231 -121586301 - L1MEd LINE L1 -5566 553 6 804 200 0 22 chr5 81501100 81501235 -121584297 - FLAM_A SINE Alu -1 132 1 4804 123 27 16 chr5 81501243 81502010 -121583522 - L1MA6 LINE L1 0 6300 5525 2091 149 0 0 chr5 81502019 81502314 -121583218 - AluSx SINE Alu -17 295 1 461 234 24 32 chr5 81502711 81502835 -121582697 + LTR67 LTR ERVL 429 551 -6 399 246 204 48 chr5 81504062 81504229 -121581303 + MIR SINE MIR 49 241 -21 192 234 112 47 chr5 81504546 81504653 -121580879 - MIR SINE MIR -64 144 31 200 260 240 10 chr5 81506028 81506124 -121579408 - L2 LINE L2 0 3313 3196 300 273 144 0 chr5 81506230 81506362 -121579170 + L2 LINE L2 3163 3313 0 420 184 92 0 chr5 81506388 81506486 -121579046 - MIR SINE MIR -108 154 48 188 301 43 32 chr5 81507655 81507748 -121577784 + MIR3 SINE MIR 107 200 -8 777 260 144 30 chr5 81509435 81509796 -121575736 - MLT1J2 LTR MaLR -26 424 23 508 220 124 60 chr5 81510093 81510407 -121575125 - L1ME4a LINE L1 -2 6119 5786 1850 218 67 4 chr5 81510522 81510985 -121574547 + LTR54B LTR ERV1 1 492 -6 296 309 176 7 chr5 81511045 81511181 -121574351 - MER5A DNA MER1_type -2 187 29 1076 151 9 93 chr5 81511379 81511604 -121573928 + MER20 DNA MER1_type 10 215 -4 769 174 27 0 chr5 81511638 81511787 -121573745 - MER105 DNA DNA -23 181 29 1447 164 4 82 chr5 81511817 81512098 -121573434 + AluJb SINE Alu 1 259 -53 256 151 0 55 chr5 81512136 81512209 -121573323 + CT-rich Low_complexity Low_complexity 1 69 0 2063 135 60 31 chr5 81512997 81513530 -121572002 + MER51A LTR ERV1 5 634 0 224 175 0 25 chr5 81513809 81513849 -121571683 - MER5B DNA MER1_type -136 42 4 1861 182 165 49 chr5 81513947 81514369 -121571163 + MLT2B1 LTR ERVL 1 483 -37 387 0 0 0 chr5 81514369 81514412 -121571120 + (TG)n Simple_repeat Simple_repeat 2 44 0 1861 182 165 49 chr5 81514412 81514455 -121571077 + MLT2B1 LTR ERVL 483 520 0 243 61 0 0 chr5 81514806 81514839 -121570693 + (TG)n Simple_repeat Simple_repeat 2 34 0 5574 85 44 5 chr5 81516059 81516837 -121568695 - L1PA10 LINE L1 -16 6152 5345 1059 249 9 4 chr5 81518305 81518534 -121566998 + MIR SINE MIR 12 241 -21 192 409 23 0 chr5 81518810 81518898 -121566634 - MIR SINE MIR -152 110 21 317 250 0 13 chr5 81519136 81519212 -121566320 - LTR33A LTR ERVL -3 520 446 304 280 68 17 chr5 81519408 81519526 -121566006 - LTR33A LTR ERVL -344 179 56 1002 269 104 28 chr5 81520379 81520888 -121564644 + L1ME3 LINE L1 4822 5369 -777 308 221 21 53 chr5 81520907 81521002 -121564530 - L1MC4 LINE L1 -1337 6705 6614 222 148 0 0 chr5 81521002 81521056 -121564476 + (TA)n Simple_repeat Simple_repeat 2 55 0 2770 229 64 19 chr5 81521056 81521825 -121563707 + L1ME3 LINE L1 5360 6162 0 212 218 73 36 chr5 81522081 81522136 -121563396 + L2 LINE L2 3247 3303 -10 761 274 95 35 chr5 81523942 81524259 -121561273 + MER102b DNA MER1_type 3 338 -3 1679 227 43 45 chr5 81528274 81528737 -121556795 - LTR40b LTR ERVL 0 462 1 483 18 0 0 chr5 81528742 81528798 -121556734 + (TA)n Simple_repeat Simple_repeat 1 56 0 1941 242 140 17 chr5 81529369 81530005 -121555527 - L1ME3A LINE L1 -8 6162 5449 1576 241 124 70 chr5 81530416 81531116 -121554416 + MER21B LTR ERV1 1 738 -125 828 265 10 16 chr5 81532595 81532834 -121552698 + MIR SINE MIR 16 251 -11 305 272 118 59 chr5 81534465 81534601 -121550931 - MIR SINE MIR -90 172 29 958 266 69 50 chr5 81535043 81535506 -121550026 - L1ME3A LINE L1 -27 6143 5672 464 240 176 19 chr5 81536362 81536675 -121548857 - L1ME4a LINE L1 -4 6117 5756 585 283 83 16 chr5 81539214 81539528 -121546004 - L1ME4a LINE L1 -230 5891 5557 207 0 0 0 chr5 81541266 81541289 -121544243 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 206 98 29 chr5 81541352 81541667 -121543865 - MER63C DNA MER1_type -592 338 2 1452 196 167 51 chr5 81541672 81542181 -121543351 + MER63C DNA MER1_type 363 930 0 708 253 85 70 chr5 81542860 81543247 -121542285 - MLT1K LTR MaLR 0 588 196 1139 261 188 2 chr5 81543286 81543696 -121541836 + LTR16C LTR ERVL 1 486 -5 1602 75 205 0 chr5 81544377 81544616 -121540916 - AluY SINE Alu -19 292 5 22 56 0 0 chr5 81544622 81544658 -121540874 + AT_rich Low_complexity Low_complexity 1 36 0 403 298 16 16 chr5 81545422 81545546 -121539986 - L2 LINE L2 -2 3311 3188 501 169 93 25 chr5 81549055 81549173 -121536359 - MER45 DNA AcHobo 0 1581 1456 1074 285 96 15 chr5 81549219 81549853 -121535679 - MER45C DNA AcHobo -213 740 1 423 0 0 0 chr5 81550175 81550222 -121535310 + (CA)n Simple_repeat Simple_repeat 1 47 0 1766 116 49 18 chr5 81551023 81551307 -121534225 + AluSc SINE Alu 1 293 -16 262 189 32 95 chr5 81551366 81551461 -121534071 - MIR SINE MIR 0 262 174 3015 151 87 11 chr5 81551622 81552184 -121533348 - MER6A DNA MER2_type 0 605 1 2082 76 0 0 chr5 81552193 81552444 -121533088 - AluY SINE Alu -60 251 1 1445 274 160 24 chr5 81552452 81552782 -121532750 - L2 LINE L2 -805 2509 2225 756 211 74 0 chr5 81552782 81552957 -121532575 + MER5A DNA MER1_type 2 189 0 1445 274 160 24 chr5 81552957 81553338 -121532194 - L2 LINE L2 -1089 2225 1701 267 234 65 0 chr5 81553338 81553415 -121532117 + CT-rich Low_complexity Low_complexity 1 82 0 256 310 45 66 chr5 81553446 81553903 -121531629 - L2 LINE L2 -1617 1697 1181 2109 116 10 3 chr5 81554672 81554974 -121530558 + AluSg SINE Alu 1 304 -6 463 300 72 33 chr5 81557008 81557188 -121528344 - MER5A DNA MER1_type 0 189 3 447 191 32 0 chr5 81558323 81558417 -121527115 - MLT1G1 LTR MaLR -2 593 497 297 231 190 61 chr5 81558504 81558742 -121526790 - MLT1F LTR MaLR -305 285 20 645 262 61 96 chr5 81559235 81559698 -121525834 + MLT1J LTR MaLR 1 480 -31 328 250 45 0 chr5 81559980 81560068 -121525464 + L2 LINE L2 3221 3312 -1 254 39 77 0 chr5 81561540 81561592 -121523940 + (TG)n Simple_repeat Simple_repeat 2 57 0 832 176 119 45 chr5 81563534 81563710 -121521822 - MER5A DNA MER1_type 0 189 1 880 260 159 56 chr5 81564122 81564530 -121521002 - MLT1J2 LTR MaLR 0 450 1 328 194 65 0 chr5 81565699 81565761 -121519771 - MER2 DNA MER2_type 0 345 280 2223 129 0 0 chr5 81565772 81566075 -121519457 + AluSx SINE Alu 1 303 -9 1150 179 0 5 chr5 81566087 81566282 -121519250 - MER2 DNA MER2_type -151 194 1 459 216 40 16 chr5 81566430 81566555 -121518977 + MER5B DNA MER1_type 10 137 -41 5067 173 36 26 chr5 81568788 81569415 -121516117 + L1MA9 LINE L1 5156 5775 -537 459 0 0 0 chr5 81569415 81569466 -121516066 + (TG)n Simple_repeat Simple_repeat 1 51 0 255 31 0 0 chr5 81569465 81569497 -121516035 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 5067 173 36 26 chr5 81569466 81569973 -121515559 + L1MA9 LINE L1 5775 6273 -39 788 179 156 18 chr5 81570644 81570868 -121514664 - Charlie5 DNA MER1_type 0 2623 2369 428 293 73 24 chr5 81571019 81571183 -121514349 + MER5A DNA MER1_type 2 173 -16 612 278 86 20 chr5 81571238 81571483 -121514049 + MER102a DNA MER1_type 31 291 -39 1362 171 35 0 chr5 81571512 81571770 -121513762 - L1MD3 LINE L1 -1 7994 7728 189 0 0 0 chr5 81573037 81573058 -121512474 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 924 188 0 0 chr5 81573064 81573213 -121512319 - FRAM SINE Alu -30 146 1 212 128 21 21 chr5 81573814 81573861 -121511671 + T-rich Low_complexity Low_complexity 3 49 0 489 248 16 8 chr5 81574991 81575112 -121510420 - MER5A DNA MER1_type 0 189 68 415 276 10 0 chr5 81575154 81575252 -121510280 + MER5A DNA MER1_type 11 109 -80 238 365 35 0 chr5 81575938 81576053 -121509479 - L2 LINE L2 -488 2826 2708 * 252 296 184 54 chr5 81576050 81576066 -121509466 - L2 LINE L2 -765 2549 2536 198 0 0 0 chr5 81576066 81576088 -121509444 + (TTG)n Simple_repeat Simple_repeat 2 23 0 252 296 184 54 chr5 81576088 81576348 -121509184 - L2 LINE L2 -778 2536 2237 2050 136 0 16 chr5 81576575 81576883 -121508649 - AluSx SINE Alu -9 303 1 262 354 0 27 chr5 81576980 81577127 -121508405 + L2 LINE L2 3166 3308 -5 274 301 26 18 chr5 81578240 81578353 -121507179 + L2 LINE L2 3114 3227 -86 293 308 58 8 chr5 81578792 81578912 -121506620 - MIR SINE MIR -32 230 105 207 256 56 11 chr5 81578894 81578984 -121506548 - L2 LINE L2 -665 2649 2556 * 203 282 26 13 chr5 81578968 81579046 -121506486 - MIR SINE MIR -72 136 58 * 50 0 0 0 chr5 81579224 81579274 -121506258 + AT_rich Low_complexity Low_complexity 1 50 0 956 274 113 25 chr5 81579897 81579995 -121505537 - L2 LINE L2 0 3313 3225 1635 167 65 3 chr5 81579995 81580289 -121505243 + AluJo SINE Alu 1 312 0 956 274 113 25 chr5 81580289 81580799 -121504733 - L2 LINE L2 -88 3225 2635 401 250 125 34 chr5 81584634 81584810 -121500722 - MIR3 SINE MIR -3 205 14 1248 159 10 19 chr5 81585129 81585336 -121500196 - 7SLRNA srpRNA srpRNA -105 215 11 742 207 8 0 chr5 81585360 81585481 -121500051 - FLAM_A SINE Alu -10 123 2 427 297 18 0 chr5 81585902 81586013 -121499519 + MIR SINE MIR 50 162 -100 21 57 0 0 chr5 81586242 81586277 -121499255 + AT_rich Low_complexity Low_complexity 1 35 0 211 340 48 48 chr5 81586542 81586689 -121498843 - L2 LINE L2 -8 3264 3118 2129 171 12 6 chr5 81586711 81587165 -121498367 - MLT2B2 LTR ERVL -8 507 5 1426 271 69 6 chr5 81587370 81587850 -121497682 + L2 LINE L2 2804 3313 0 292 236 55 146 chr5 81589648 81589813 -121495719 - MIR3 SINE MIR -11 197 48 743 309 22 19 chr5 81590524 81590930 -121494602 - LTR16B LTR ERVL 0 464 1 679 250 75 36 chr5 81590971 81591223 -121494309 + MIR SINE MIR 1 262 0 1857 148 71 79 chr5 81591248 81591641 -121493891 + MLT1B LTR MaLR 1 390 0 180 0 0 0 chr5 81592674 81592694 -121492838 + (T)n Simple_repeat Simple_repeat 1 20 0 668 265 12 0 chr5 81593032 81593198 -121492334 - MER5B DNA MER1_type 0 178 11 333 301 144 72 chr5 81594550 81594938 -121490594 + L2 LINE L2 2832 3247 -25 294 304 118 20 chr5 81595672 81595876 -121489656 + MIR SINE MIR 18 241 -21 215 311 0 27 chr5 81597174 81597248 -121488284 - L2 LINE L2 0 3313 3242 2179 283 102 16 chr5 81597323 81598267 -121487265 - L2 LINE L2 -162 3151 2108 1370 253 117 62 chr5 81598644 81599158 -121486374 - MLT1F LTR MaLR 0 542 1 5472 216 47 55 chr5 81599187 81601590 -121483942 - L1MC1 LINE L1 -6 6327 3956 286 242 108 17 chr5 81601692 81601812 -121483720 - MER112 DNA MER1_type -11 249 119 222 129 0 82 chr5 81603573 81603658 -121481874 + (ATTAG)n Simple_repeat Simple_repeat 2 79 0 541 246 171 12 chr5 81603712 81603964 -121481568 - MLT1L LTR MaLR -2 613 322 276 231 0 15 chr5 81604687 81604752 -121480780 - L2 LINE L2 -41 3231 3168 1352 242 78 12 chr5 81607332 81607828 -121477704 + MLT1G LTR MaLR 18 590 0 2426 74 3 0 chr5 81609847 81610146 -121475386 + AluY SINE Alu 1 300 -11 242 314 86 0 chr5 81611949 81612054 -121473478 - LTR16C LTR ERVL -196 295 182 22 0 0 0 chr5 81612727 81612749 -121472783 + AT_rich Low_complexity Low_complexity 1 22 0 451 26 65 0 chr5 81613536 81613613 -121471919 + (TA)n Simple_repeat Simple_repeat 2 83 0 345 313 43 9 chr5 81613731 81613846 -121471686 - L2 LINE L2 -16 3256 3138 1719 155 25 0 chr5 81614306 81614590 -121470942 + L1MA5 LINE L1 6008 6298 -2 1931 203 43 0 chr5 81614825 81615175 -121470357 + MLT1A1 LTR MaLR 1 365 0 955 212 79 81 chr5 81615319 81615738 -121469794 + MLT1A2 LTR MaLR 5 363 -11 193 291 89 0 chr5 81615971 81616050 -121469482 + MER5A DNA MER1_type 2 87 -102 316 242 124 37 chr5 81617545 81617706 -121467826 - MIR3 SINE MIR -15 193 19 888 337 60 8 chr5 81617846 81618232 -121467300 + L2 LINE L2 2380 2785 -529 4509 177 30 49 chr5 81618235 81620070 -121465462 + L1MB8 LINE L1 4381 6173 -5 386 307 11 119 chr5 81620235 81620411 -121465121 + L2 LINE L2 3115 3271 -1 477 260 46 51 chr5 81620618 81620814 -121464718 - L2 LINE L2 0 3313 3119 1547 252 123 7 chr5 81620899 81621364 -121464168 + MLT1F LTR MaLR 8 526 -16 815 250 107 36 chr5 81621368 81621651 -121463881 - L2 LINE L2 -260 3053 2745 2250 113 0 0 chr5 81621651 81621951 -121463581 - AluSx SINE Alu -12 300 1 815 250 107 36 chr5 81621951 81622010 -121463522 - L2 LINE L2 -568 2745 2692 227 223 53 106 chr5 81622276 81622370 -121463162 - MER5B DNA MER1_type -22 156 68 188 276 149 0 chr5 81622524 81622611 -121462921 + L2 LINE L2 3209 3308 -5 661 266 197 26 chr5 81623007 81623311 -121462221 - L2 LINE L2 -405 2909 2554 708 272 0 17 chr5 81623381 81623554 -121461978 - MIR SINE MIR -59 203 34 237 139 0 0 chr5 81623869 81623912 -121461620 + (CA)n Simple_repeat Simple_repeat 1 43 0 204 185 0 0 chr5 81624119 81624173 -121461359 + (TG)n Simple_repeat Simple_repeat 2 55 0 22332 68 5 2 chr5 81626455 81627320 -121458212 + L1P LINE L1 2346 3207 -2939 225 0 0 0 chr5 81627320 81627345 -121458187 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 22332 68 5 2 chr5 81627345 81629383 -121456149 + L1P LINE L1 3207 5258 -888 18394 65 4 3 chr5 81629483 81629609 -121455923 + L1PA6 LINE L1 3085 3209 -2945 225 0 0 0 chr5 81629609 81629634 -121455898 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 18394 65 4 3 chr5 81629634 81632568 -121452964 + L1PA6 LINE L1 3209 6154 0 234 0 0 0 chr5 81633147 81633173 -121452359 + (T)n Simple_repeat Simple_repeat 1 26 0 212 289 13 33 chr5 81633259 81633411 -121452121 + (TA)n Simple_repeat Simple_repeat 1 149 0 237 350 43 8 chr5 81633493 81633610 -121451922 + L2 LINE L2 2918 3038 -234 2120 54 4 8 chr5 81633664 81633923 -121451609 - L1PA5 LINE L1 -2 6152 5895 5092 96 9 1 chr5 81633923 81634622 -121450910 - L1P3 LINE L1 -5146 1315 612 633 137 11 0 chr5 81634607 81634702 -121450830 - L1P3 LINE L1 -6365 96 1 * 236 352 33 43 chr5 81634921 81635131 -121450401 - L2 LINE L2 -350 2964 2757 438 315 90 19 chr5 81635155 81636032 -121449500 - L1ME4a LINE L1 0 6121 5153 1724 227 89 30 chr5 81636180 81636651 -121448881 + MLT1D LTR MaLR 7 505 0 280 92 0 66 chr5 81637644 81637720 -121447812 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 * 904 126 11 22 chr5 81637708 81637890 -121447642 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 331 256 12 12 chr5 81637890 81637976 -121447556 + CT-rich Low_complexity Low_complexity 3 88 0 189 0 0 0 chr5 81638817 81638838 -121446694 + (A)n Simple_repeat Simple_repeat 1 21 0 216 325 26 0 chr5 81639527 81639604 -121445928 + MIR SINE MIR 59 137 -71 580 297 69 4 chr5 81639970 81640202 -121445330 - MIR SINE MIR -11 251 5 30 69 0 0 chr5 81641571 81641629 -121443903 + AT_rich Low_complexity Low_complexity 1 58 0 2060 123 69 34 chr5 81641783 81642133 -121443399 - THE1B LTR MaLR 0 364 3 216 135 0 0 chr5 81642360 81642397 -121443135 + (TA)n Simple_repeat Simple_repeat 2 38 0 763 296 51 16 chr5 81642467 81642778 -121442754 - L1ME LINE L1 -381 5740 5419 840 217 106 26 chr5 81643301 81643608 -121441924 + MLT1G1 LTR MaLR 1 288 -302 416 313 24 59 chr5 81643699 81643987 -121441545 - L2 LINE L2 -191 3081 2804 204 40 0 0 chr5 81644112 81644137 -121441395 + (T)n Simple_repeat Simple_repeat 1 25 0 201 184 0 41 chr5 81644355 81644404 -121441128 + CT-rich Low_complexity Low_complexity 1 47 0 800 266 50 0 chr5 81644902 81645101 -121440431 - MER58A DNA MER1_type -10 214 6 442 306 76 0 chr5 81645109 81645253 -121440279 - MIR3 SINE MIR -48 160 6 989 140 154 37 chr5 81646116 81646432 -121439100 - MSTA LTR MaLR 0 428 1 457 291 79 13 chr5 81647269 81647468 -121438064 - MIR SINE MIR -44 218 3 26 0 0 0 chr5 81647894 81647920 -121437612 + AT_rich Low_complexity Low_complexity 1 26 0 300 299 45 38 chr5 81651471 81651628 -121433904 - L1MEd LINE L1 -5951 168 11 303 259 0 0 chr5 81651637 81651691 -121433841 - MIR SINE MIR -180 82 29 433 332 79 11 chr5 81652560 81652750 -121432782 + MIR SINE MIR 23 225 -37 1153 113 43 27 chr5 81653799 81653985 -121431547 + MER5A DNA MER1_type 1 189 0 2157 260 70 48 chr5 81654492 81655161 -121430371 - MER115 DNA AcHobo 0 693 10 271 276 128 13 chr5 81656265 81656421 -121429111 + L1ME LINE L1 5549 5722 -399 2125 300 154 28 chr5 81656458 81657669 -121427863 + L2 LINE L2 1548 2911 -403 405 304 29 71 chr5 81657848 81658088 -121427444 - MLT1J LTR MaLR -42 469 240 2178 167 15 26 chr5 81658347 81658737 -121426795 + MLT1B LTR MaLR 1 386 -4 456 269 108 0 chr5 81658745 81658875 -121426657 - MIR SINE MIR -112 150 7 738 227 167 15 chr5 81659798 81660115 -121425417 - MLT1G1 LTR MaLR 0 595 207 221 271 17 0 chr5 81660131 81660190 -121425342 + GA-rich Low_complexity Low_complexity 4 63 0 230 266 165 25 chr5 81660228 81660307 -121425225 - MLT1G1 LTR MaLR -410 145 56 685 159 7 7 chr5 81660886 81661031 -121424501 + GA-rich Low_complexity Low_complexity 2 146 0 1668 118 6 109 chr5 81661148 81661477 -121424055 + AluJb SINE Alu 1 295 -17 238 113 19 19 chr5 81662764 81662817 -121422715 + (CA)n Simple_repeat Simple_repeat 1 53 0 219 133 0 0 chr5 81662862 81662907 -121422625 + (CA)n Simple_repeat Simple_repeat 1 45 0 564 246 59 20 chr5 81663786 81663988 -121421544 + MIR SINE MIR 4 224 -38 229 183 28 99 chr5 81664048 81664119 -121421413 - L2 LINE L2 -41 3272 3207 276 174 103 0 chr5 81664591 81664668 -121420864 - MER5A DNA MER1_type -71 107 25 9459 144 21 5 chr5 81664841 81667423 -121418109 + L1MA4A LINE L1 3670 6294 -9 214 257 37 37 chr5 81670750 81670859 -121414673 + L2 LINE L2 2951 3059 -213 688 335 36 0 chr5 81670884 81671132 -121414400 + MIR SINE MIR 6 262 0 350 331 39 0 chr5 81672131 81672261 -121413271 - MIR3 SINE MIR -16 192 58 522 232 188 11 chr5 81672394 81672575 -121412957 + MER112 DNA MER1_type 4 216 -44 595 297 184 12 chr5 81672605 81672948 -121412584 - LTR16C LTR ERVL 0 491 90 2139 93 62 0 chr5 81673153 81673444 -121412088 + AluSp SINE Alu 5 313 0 209 244 218 0 chr5 81674078 81674156 -121411376 + MIR SINE MIR 33 127 -81 234 266 63 51 chr5 81674487 81674566 -121410966 - L2 LINE L2 -17 3255 3176 261 325 122 0 chr5 81674890 81675078 -121410454 + L2 LINE L2 1784 1994 -1320 2079 126 7 10 chr5 81675081 81675383 -121410149 - AluSx SINE Alu -11 301 1 480 262 93 12 chr5 81675405 81675577 -121409955 - L1ME3A LINE L1 -9 6161 5976 267 274 74 17 chr5 81675581 81675765 -121409767 + LTR16A LTR ERVL 4 195 -255 300 27 0 0 chr5 81675789 81675826 -121409706 + (TG)n Simple_repeat Simple_repeat 2 38 0 773 201 49 35 chr5 81675830 81675974 -121409558 - FRAM SINE Alu -31 145 1 481 281 92 0 chr5 81675988 81676152 -121409380 + LTR16A LTR ERVL 263 441 -9 1140 289 52 14 chr5 81676168 81676607 -121408925 - L1ME3A LINE L1 -199 5971 5516 285 163 0 0 chr5 81676608 81676651 -121408881 + MER58 DNA MER1_type 2378 2420 0 1786 194 24 9 chr5 81676776 81677111 -121408421 - MER58B DNA MER1_type 0 341 2 623 255 235 10 chr5 81677524 81677724 -121407808 + MIR SINE MIR 18 262 0 1595 193 0 30 chr5 81677762 81678058 -121407474 + AluJb SINE Alu 1 287 -25 615 267 113 18 chr5 81678310 81678531 -121407001 + MIR SINE MIR 10 251 -11 733 164 9 0 chr5 81679369 81679485 -121406047 + FLAM_C SINE Alu 1 117 -26 31 44 0 0 chr5 81679485 81679530 -121406002 + AT_rich Low_complexity Low_complexity 1 45 0 182 37 37 0 chr5 81679578 81679605 -121405927 + (TG)n Simple_repeat Simple_repeat 1 28 0 702 230 34 45 chr5 81682323 81682588 -121402944 - L1ME LINE L1 -1296 4850 4589 * 1650 221 66 22 chr5 81682584 81683346 -121402186 + L1ME LINE L1 4858 5686 -480 276 133 44 0 chr5 81683586 81683631 -121401901 - HSMAR1 DNA Mariner -1240 47 1 243 0 0 0 chr5 81683686 81683713 -121401819 + (TG)n Simple_repeat Simple_repeat 2 28 0 565 272 29 29 chr5 81686083 81686256 -121399276 - MIR3 SINE MIR -33 175 3 220 333 56 39 chr5 81686421 81686601 -121398931 - L3b LINE CR1 -272 1311 1129 219 325 143 24 chr5 81688194 81688320 -121397212 + MIR SINE MIR 35 175 -87 187 235 71 82 chr5 81688325 81688423 -121397109 + L2 LINE L2 2661 2757 -557 629 314 110 24 chr5 81688524 81689197 -121396335 - L2 LINE L2 -60 3253 2519 200 137 20 0 chr5 81689669 81689720 -121395812 + CT-rich Low_complexity Low_complexity 1 52 0 669 152 249 109 chr5 81689721 81689978 -121395554 - L1MD2 LINE L1 -20 6339 6047 * 4912 180 69 29 chr5 81689976 81691146 -121394386 - L1MDa LINE L1 -4230 2310 1094 471 295 39 0 chr5 81691276 81691405 -121394127 + MIR SINE MIR 11 144 -118 651 138 108 36 chr5 81691668 81691835 -121393697 + MER53 DNA DNA 3 181 -8 21 0 0 0 chr5 81693602 81693623 -121391909 + AT_rich Low_complexity Low_complexity 1 21 0 314 271 41 25 chr5 81693656 81693778 -121391754 + LTR37B LTR ERV1 10 133 -335 513 219 116 44 chr5 81693938 81694189 -121391343 + LTR37B LTR ERV1 197 465 -3 300 252 78 17 chr5 81695447 81695562 -121389970 - L1ME4a LINE L1 -18 6103 5982 284 241 316 0 chr5 81696162 81696295 -121389237 - MER5A DNA MER1_type -6 183 9 364 254 26 44 chr5 81696799 81696913 -121388619 - L1ME4a LINE L1 -406 5715 5604 442 218 0 23 chr5 81699284 81699371 -121386161 - MIR SINE MIR -111 151 67 1504 174 169 17 chr5 81699532 81699888 -121385644 + LTR52 LTR ERVL 1 410 -11 987 265 108 21 chr5 81699908 81700345 -121385187 + LTR33 LTR ERVL 47 521 0 326 252 37 74 chr5 81700345 81700480 -121385052 + MIR SINE MIR 113 242 -20 241 213 147 13 chr5 81700471 81700546 -121384986 + MIR SINE MIR 105 189 -73 * 447 321 86 16 chr5 81701572 81701759 -121383773 + MIR SINE MIR 20 219 -43 376 265 10 20 chr5 81701875 81701973 -121383559 + MIR SINE MIR 23 119 -89 743 234 42 42 chr5 81702538 81702777 -121382755 - L2 LINE L2 0 3313 3075 247 311 208 11 chr5 81702840 81703023 -121382509 - L2 LINE L2 -354 2960 2742 1977 150 0 0 chr5 81703726 81704012 -121381520 + AluSx SINE Alu 1 286 -26 270 143 0 0 chr5 81704027 81704076 -121381456 + (TA)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr5 81704568 81704591 -121380941 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5256 157 16 29 chr5 81706891 81708022 -121377510 - L1 LINE L1 -1361 4785 3670 5212 128 39 15 chr5 81708736 81709738 -121375794 - L1MA4A LINE L1 -122 6181 5156 405 331 20 20 chr5 81710036 81710184 -121375348 + MIR SINE MIR 2 149 -113 336 329 151 53 chr5 81710308 81710504 -121375028 + L2 LINE L2 2158 2334 -980 1825 184 33 55 chr5 81710504 81710901 -121374631 + MLT1B LTR MaLR 3 390 0 336 329 151 53 chr5 81710901 81711209 -121374323 + L2 LINE L2 2334 2711 -603 219 223 43 25 chr5 81713360 81713436 -121372096 + MIR SINE MIR 4 79 -133 1512 173 84 0 chr5 81714370 81714654 -121370878 + AluJo SINE Alu 1 308 -4 341 276 97 33 chr5 81714710 81715003 -121370529 - L1MC4a LINE L1 -72 6049 5735 227 245 61 71 chr5 81715003 81715101 -121370431 + LTR48B LTR ERV1 1 97 -547 * 1151 227 99 62 chr5 81715078 81715510 -121370022 + MER39 LTR ERV1 260 707 0 3470 204 73 52 chr5 81715701 81716331 -121369201 + L1ME1 LINE L1 4862 5477 -689 1917 127 109 29 chr5 81716331 81716678 -121368854 - THE1C LTR MaLR 0 375 1 3470 204 73 52 chr5 81716678 81717300 -121368232 + L1ME1 LINE L1 5477 6165 -1 210 71 0 0 chr5 81717861 81717889 -121367643 + (ATGGTG)n Simple_repeat Simple_repeat 5 32 0 570 326 0 0 chr5 81717912 81718087 -121367445 - MIR SINE MIR -13 249 75 309 294 227 10 chr5 81718632 81718826 -121366706 - MIR SINE MIR -14 248 13 22 35 0 0 chr5 81719305 81719334 -121366198 + AT_rich Low_complexity Low_complexity 1 29 0 769 209 30 85 chr5 81719410 81719645 -121365887 + L1ME3A LINE L1 5949 6170 0 2534 144 58 0 chr5 81720191 81720572 -121364960 + MER57A LTR ERV1 1 403 0 396 229 28 49 chr5 81720755 81720899 -121364633 + L1MC5 LINE L1 7786 7926 -35 425 312 194 16 chr5 81721148 81721334 -121364198 + MIR SINE MIR 25 243 -19 2541 144 11 74 chr5 81722146 81722605 -121362927 + MSTB1 LTR MaLR 3 432 0 509 286 84 6 chr5 81724059 81724237 -121361295 + MER117 DNA MER1_type 4 195 -2 2059 191 179 32 chr5 81724270 81724912 -121360620 - LTR48 LTR ERV1 0 787 1 476 313 172 35 chr5 81725096 81725550 -121359982 + MLT1K LTR MaLR 46 561 -27 243 0 0 0 chr5 81726820 81726847 -121358685 + (T)n Simple_repeat Simple_repeat 1 27 0 2224 102 25 125 chr5 81727875 81728281 -121357251 + MER4D LTR ERV1 1 446 -457 1863 175 0 3 chr5 81728281 81728578 -121356954 + AluSx SINE Alu 1 296 -16 2224 102 25 125 chr5 81728578 81728868 -121356664 + MER4D LTR ERV1 446 903 0 305 327 123 6 chr5 81729854 81730016 -121355516 - MIR SINE MIR -8 254 74 913 260 20 4 chr5 81732674 81732920 -121352612 - MIR SINE MIR -1 261 12 2058 163 0 3 chr5 81733285 81733598 -121351934 + 7SLRNA srpRNA srpRNA 1 312 -8 3543 163 79 26 chr5 81734685 81735368 -121350164 + L1MB2 LINE L1 5446 6164 -7 229 250 0 83 chr5 81736466 81736538 -121348994 + L2 LINE L2 3238 3303 -10 432 250 56 14 chr5 81739601 81739745 -121345787 + LTR33A LTR ERVL 374 523 0 1235 265 101 3 chr5 81739949 81740326 -121345206 + LTR16A LTR ERVL 16 429 -21 1660 149 26 128 chr5 81740343 81740582 -121344950 - MLT1B LTR MaLR -10 380 201 2328 91 3 3 chr5 81740582 81740879 -121344653 - AluSc SINE Alu -12 297 1 1660 149 26 128 chr5 81740879 81741062 -121344470 - MLT1B LTR MaLR -189 201 1 2174 127 3 13 chr5 81741574 81741888 -121343644 - AluSx SINE Alu -1 311 1 229 250 18 0 chr5 81743310 81743366 -121342166 + C-rich Low_complexity Low_complexity 3 59 0 247 328 26 43 chr5 81744163 81744279 -121341253 + MIR3 SINE MIR 10 123 -85 217 247 91 13 chr5 81744376 81744453 -121341079 - MIR SINE MIR -114 148 66 185 248 15 181 chr5 81745073 81745206 -121340326 + MIR3 SINE MIR 97 207 -1 1580 84 75 0 chr5 81745305 81745519 -121340013 - MER30 DNA MER1_type 0 230 1 210 171 0 0 chr5 81745580 81745621 -121339911 + CT-rich Low_complexity Low_complexity 2 42 0 3574 61 47 0 chr5 81745937 81746361 -121339171 - MLT2A1 LTR ERVL 0 444 1 224 255 82 0 chr5 81747399 81747466 -121338066 - MIR SINE MIR -63 145 80 269 304 78 0 chr5 81748344 81748459 -121337073 - MER117 DNA MER1_type -68 129 6 290 275 62 166 chr5 81748677 81749110 -121336422 + L2 LINE L2 2871 3258 -14 330 241 123 47 chr5 81749280 81749450 -121336082 - MLT1L LTR MaLR 0 615 433 271 144 7 19 chr5 81749532 81749585 -121335947 - MLT1I LTR MaLR -269 140 98 295 221 91 13 chr5 81749683 81749760 -121335772 - MLT1L LTR MaLR -518 97 15 368 188 0 59 chr5 81750060 81750145 -121335387 + L1ME3A LINE L1 5512 5591 -571 2565 212 31 23 chr5 81750148 81750753 -121334779 - MER74B LTR ERVL 0 622 13 667 269 162 15 chr5 81750755 81751082 -121334450 + L1ME3A LINE L1 5590 5964 -206 237 202 45 67 chr5 81751124 81751213 -121334319 + L1ME3A LINE L1 5961 6047 -123 25 0 0 0 chr5 81751639 81751664 -121333868 + AT_rich Low_complexity Low_complexity 1 25 0 254 284 23 0 chr5 81753569 81753657 -121331875 - MER97a DNA MER1_type? 0 894 805 202 206 0 0 chr5 81753736 81753770 -121331762 + polypurine Low_complexity Low_complexity 3 36 0 2471 207 103 63 chr5 81753908 81754427 -121331105 - MER97b DNA MER1_type? -194 859 362 2384 81 7 0 chr5 81754427 81754724 -121330808 + AluSg SINE Alu 1 299 -11 2471 207 103 63 chr5 81754724 81754917 -121330615 - MER97b DNA MER1_type? -691 362 107 1777 174 3 3 chr5 81754917 81755227 -121330305 + AluJo SINE Alu 1 310 -2 2471 207 103 63 chr5 81755227 81755339 -121330193 - MER97b DNA MER1_type? -946 107 1 275 338 35 25 chr5 81755455 81755656 -121329876 - MIR SINE MIR -12 250 48 404 187 47 12 chr5 81755917 81756088 -121329444 + CT-rich Low_complexity Low_complexity 2 178 0 788 267 126 61 chr5 81756945 81757421 -121328111 - MLT1J LTR MaLR 0 511 5 450 310 5 13 chr5 81757610 81757785 -121327747 - MIR SINE MIR -70 192 20 466 126 11 21 chr5 81757794 81757889 -121327643 + (TTCC)n Simple_repeat Simple_repeat 2 95 0 341 238 66 25 chr5 81758177 81758299 -121327233 - L1ME3A LINE L1 -287 5883 5757 712 286 25 8 chr5 81758307 81758548 -121326984 - MIR SINE MIR -11 251 7 481 306 71 21 chr5 81758785 81759125 -121326407 - L1ME3A LINE L1 -518 5646 5290 847 205 23 0 chr5 81759161 81759332 -121326200 - L1PA15 LINE L1 0 6165 5991 288 279 80 55 chr5 81759548 81759749 -121325783 - L1ME3A LINE L1 -1157 4989 4784 3236 44 0 0 chr5 81760022 81760407 -121325125 - L1PA5 LINE L1 0 6154 5770 42768 56 8 1 chr5 81760415 81766526 -121319006 - L1PA3 LINE L1 0 6155 1 1894 159 0 23 chr5 81766997 81767305 -121318227 + AluJb SINE Alu 11 311 -1 467 322 113 19 chr5 81768677 81769040 -121316492 - L2 LINE L2 0 3313 2917 614 281 92 8 chr5 81770615 81770853 -121314679 + MIR SINE MIR 2 259 -3 234 195 65 89 chr5 81770840 81770963 -121314569 - MIR SINE MIR -3 259 140 * 279 327 96 25 chr5 81771843 81772042 -121313490 - MIR SINE MIR -4 258 46 2229 197 40 59 chr5 81772137 81772301 -121313231 + LTR53 LTR ERVL 1 167 -352 953 136 62 43 chr5 81772301 81772463 -121313069 + FRAM SINE Alu 1 165 -1 2293 104 3 3 chr5 81772471 81772770 -121312762 + AluSg SINE Alu 1 299 -11 2229 197 40 59 chr5 81772770 81773125 -121312407 + LTR53 LTR ERVL 174 519 0 584 230 137 15 chr5 81773229 81773433 -121312099 + MIR SINE MIR 14 242 -20 590 262 36 6 chr5 81773819 81773987 -121311545 - MIR SINE MIR 0 262 90 283 289 10 21 chr5 81773990 81774087 -121311445 - MER5B DNA MER1_type -77 101 6 489 235 175 0 chr5 81774354 81774520 -121311012 - MIR SINE MIR -37 225 31 496 219 0 0 chr5 81774630 81774726 -121310806 - MLT1C LTR MaLR -1 466 371 1346 220 39 57 chr5 81774728 81775213 -121310319 - MER39 LTR ERV1 -2 687 67 1437 171 38 8 chr5 81775244 81775508 -121310024 - MLT1C LTR MaLR -189 278 7 964 284 83 26 chr5 81778285 81778884 -121306648 - MER115 DNA AcHobo 0 693 30 1111 215 104 102 chr5 81780635 81781204 -121304328 - MLT1G1 LTR MaLR -1 554 1 186 237 140 54 chr5 81781750 81781843 -121303689 + MIR SINE MIR 60 160 -102 197 192 0 19 chr5 81783279 81783331 -121302201 + GA-rich Low_complexity Low_complexity 2 52 0 381 226 11 21 chr5 81783558 81783651 -121301881 + MER96 DNA MER1_type? 82 173 -2 470 271 28 72 chr5 81783667 81783711 -121301821 + MER5B DNA MER1_type 5 49 -129 1986 161 0 0 chr5 81783711 81784021 -121301511 - AluSx SINE Alu -2 310 1 470 271 28 72 chr5 81784021 81784157 -121301375 + MER5B DNA MER1_type 49 177 -1 2106 95 0 41 chr5 81784646 81784965 -121300567 + AluSc SINE Alu 1 307 0 243 164 82 49 chr5 81786928 81786989 -121298543 + MLT1L LTR MaLR 217 279 -336 246 275 12 12 chr5 81787250 81787330 -121298202 - MIR SINE MIR -96 166 87 21 0 0 0 chr5 81787956 81787977 -121297555 + AT_rich Low_complexity Low_complexity 1 21 0 304 372 24 0 chr5 81788443 81788607 -121296925 - MIR SINE MIR -7 255 88 315 0 0 0 chr5 81788665 81788700 -121296832 + (CA)n Simple_repeat Simple_repeat 2 36 0 530 288 102 27 chr5 81790899 81791224 -121294308 + L1ME4a LINE L1 5267 5566 -555 1546 183 60 52 chr5 81791224 81791591 -121293941 + MLT1A2 LTR MaLR 1 370 -4 530 288 102 27 chr5 81791591 81791917 -121293615 + L1ME4a LINE L1 5566 5973 -148 1682 178 0 20 chr5 81792376 81792679 -121292853 + AluJo SINE Alu 5 301 -11 283 299 192 11 chr5 81792797 81792974 -121292558 + L3 LINE CR1 1274 1482 -95 25 90 0 0 chr5 81792998 81793065 -121292467 + AT_rich Low_complexity Low_complexity 1 67 0 302 250 196 9 chr5 81793153 81793265 -121292267 + MER94 DNA DNA 2 134 0 1430 193 35 64 chr5 81794434 81794801 -121290731 - MLT1A1 LTR MaLR -3 362 9 379 247 11 11 chr5 81795814 81795907 -121289625 + MIR SINE MIR 21 113 -95 1636 112 80 31 chr5 81795976 81796262 -121289270 + AluSq SINE Alu 1 300 -13 1671 171 0 30 chr5 81796383 81796687 -121288845 + AluJb SINE Alu 1 295 -17 192 77 0 0 chr5 81800377 81800403 -121285129 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2366 152 55 2 chr5 81800531 81800933 -121284599 + MSTC LTR MaLR 4 426 -2 317 296 53 40 chr5 81800978 81801130 -121284402 + MIR3 SINE MIR 49 202 -6 258 283 81 10 chr5 81801411 81801510 -121284022 - MIR SINE MIR -102 160 55 305 345 65 29 chr5 81801572 81801711 -121283821 + MIR3 SINE MIR 7 150 -58 721 224 0 137 chr5 81801720 81801939 -121283593 + MER5A DNA MER1_type 1 189 0 240 241 0 0 chr5 81801939 81801991 -121283541 + L3 LINE CR1 1526 1577 0 663 243 32 29 chr5 81803311 81803484 -121282048 - MIR SINE MIR -63 145 6 313 224 61 98 chr5 81803500 81803590 -121281942 - MLT1L LTR MaLR 0 615 523 2265 103 3 0 chr5 81803590 81803882 -121281650 + AluSx SINE Alu 13 305 -7 313 224 61 98 chr5 81803882 81804075 -121281457 - MLT1L LTR MaLR -92 523 242 380 324 48 68 chr5 81804142 81804392 -121281140 - MLT1L LTR MaLR -370 245 1 510 310 112 29 chr5 81805278 81805726 -121279806 + L1ME4a LINE L1 5636 6120 -1 24 0 0 0 chr5 81805745 81805769 -121279763 + AT_rich Low_complexity Low_complexity 1 24 0 326 307 93 46 chr5 81806093 81806395 -121279137 - L1M4 LINE L1 -814 5332 5005 1998 185 77 13 chr5 81806395 81806774 -121278758 - MER57A LTR ERV1 0 403 1 326 307 93 46 chr5 81806774 81806881 -121278651 - L1M4 LINE L1 -1141 5005 4904 2432 63 0 3 chr5 81806917 81807220 -121278312 - AluY SINE Alu -9 302 1 324 249 58 46 chr5 81807407 81807580 -121277952 - L1M4 LINE L1 -1440 4706 4532 2323 220 49 21 chr5 81807963 81808494 -121277038 - MLT1E LTR MaLR -2 591 46 278 319 178 6 chr5 81809157 81809314 -121276218 - MIR SINE MIR -71 191 8 1825 169 102 6 chr5 81809741 81810073 -121275459 - MLT1A1 LTR MaLR -1 364 1 1056 205 22 0 chr5 81810572 81810757 -121274775 + MER5A DNA MER1_type 1 189 0 203 128 77 0 chr5 81810767 81810806 -121274726 + MIR SINE MIR 160 201 -61 203 175 25 0 chr5 81811493 81811533 -121273999 + MIR SINE MIR 220 260 -2 186 276 92 46 chr5 81811996 81812083 -121273449 - MIR SINE MIR -94 114 24 665 224 110 113 chr5 81812154 81812432 -121273100 + MER102b DNA MER1_type 3 281 -1147 2492 138 18 5 chr5 81812432 81812817 -121272715 - MLT1B LTR MaLR 0 390 1 665 224 110 113 chr5 81812817 81812873 -121272659 + MER102b DNA MER1_type 281 336 -5 518 143 0 0 chr5 81813364 81813441 -121272091 + MADE1 DNA Mariner 1 77 -3 364 323 49 18 chr5 81813505 81813669 -121271863 + MIR3 SINE MIR 33 201 -7 1205 248 97 21 chr5 81814199 81814582 -121270950 + MLT1J2 LTR MaLR 25 436 -14 578 195 207 24 chr5 81814993 81815162 -121270370 + MER105 DNA DNA 1 200 -4 407 59 0 0 chr5 81815837 81815888 -121269644 + MADE1 DNA Mariner 1 51 -29 292 310 10 10 chr5 81816241 81816341 -121269191 + L3b LINE CR1 1171 1270 -313 411 304 53 110 chr5 81816935 81817409 -121268123 + L2 LINE L2 2826 3272 0 2179 110 0 0 chr5 81819059 81819340 -121266192 - AluSc SINE Alu -28 281 1 207 287 160 0 chr5 81820670 81820764 -121264768 - MIR SINE MIR -80 128 20 3730 164 25 5 chr5 81820811 81821404 -121264128 + MER6A DNA MER2_type 1 605 0 330 300 160 8 chr5 81821708 81821958 -121263574 - L2 LINE L2 -1 3312 3025 217 347 53 27 chr5 81822048 81822198 -121263334 + L2 LINE L2 2901 3054 -218 236 270 87 35 chr5 81827266 81827381 -121258151 + MLT1K LTR MaLR 314 434 -154 692 178 17 0 chr5 81829079 81829197 -121256335 - MLT1C LTR MaLR -347 120 1 24 53 0 0 chr5 81830409 81830447 -121255085 + AT_rich Low_complexity Low_complexity 1 38 0 185 0 0 39 chr5 81830500 81830526 -121255006 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 623 293 37 21 chr5 81831677 81831865 -121253667 + MIR SINE MIR 31 221 -41 206 310 29 82 chr5 81833699 81833870 -121251662 + MIR SINE MIR 40 201 -61 265 260 130 0 chr5 81835120 81835197 -121250335 + MIR3 SINE MIR 115 201 -7 1080 231 5 5 chr5 81835224 81835440 -121250092 - MER58A DNA MER1_type 0 224 9 360 0 0 0 chr5 81835595 81835635 -121249897 + (CA)n Simple_repeat Simple_repeat 2 41 0 564 174 0 0 chr5 81835837 81835935 -121249597 + MER5A DNA MER1_type 13 110 -79 723 287 87 38 chr5 81835988 81836453 -121249079 - LTR33 LTR ERVL -9 512 8 226 212 121 91 chr5 81837004 81837073 -121248459 + MIR SINE MIR 67 141 -121 1735 183 10 80 chr5 81837073 81837472 -121248060 + MER93b LTR ERV1 3 373 0 226 212 121 91 chr5 81837472 81837501 -121248031 + MIR SINE MIR 141 168 -94 317 152 30 0 chr5 81838367 81838433 -121247099 + GA-rich Low_complexity Low_complexity 3 70 0 619 152 13 32 chr5 81838450 81838608 -121246924 + GA-rich Low_complexity Low_complexity 2 156 0 3050 116 21 12 chr5 81838622 81839046 -121246486 - MSTA LTR MaLR 0 428 1 2880 165 22 51 chr5 81839986 81840030 -121245502 - L1MB3 LINE L1 -8 6175 6131 1886 153 4 0 chr5 81840030 81840311 -121245221 - AluJo SINE Alu -20 292 11 2880 165 22 51 chr5 81840311 81840818 -121244714 - L1MB3 LINE L1 -52 6131 5640 23 54 0 0 chr5 81841019 81841056 -121244476 + AT_rich Low_complexity Low_complexity 1 37 0 225 116 47 0 chr5 81842130 81842173 -121243359 - L2 LINE L2 -94 3219 3175 1877 177 89 87 chr5 81842307 81842792 -121242740 - MLT1D LTR MaLR -2 503 18 2403 67 0 0 chr5 81842881 81843180 -121242352 + AluY SINE Alu 1 299 -12 261 255 28 75 chr5 81843720 81843826 -121241706 - MIR3 SINE MIR -106 102 2 334 263 30 10 chr5 81844618 81844717 -121240815 + L2 LINE L2 2933 3033 -239 429 180 70 78 chr5 81844761 81844889 -121240643 + LTR28 LTR ERV1 1 178 -298 604 163 0 0 chr5 81844889 81844975 -121240557 - AluS SINE Alu -225 88 3 2548 174 128 91 chr5 81844981 81845730 -121239802 + LTR28 LTR ERV1 244 1020 0 463 270 68 54 chr5 81845804 81845952 -121239580 + L2 LINE L2 3122 3271 -1 214 254 34 34 chr5 81846406 81846465 -121239067 + MIR SINE MIR 183 241 -21 282 56 0 0 chr5 81847134 81847170 -121238362 + (CA)n Simple_repeat Simple_repeat 2 37 0 1244 234 26 29 chr5 81850277 81850584 -121234948 + L1MC4a LINE L1 6518 6823 -985 2873 99 29 2 chr5 81850605 81851049 -121234483 - L1PA7 LINE L1 -2276 3870 3415 11497 87 11 5 chr5 81851048 81853326 -121232206 + L1PA7 LINE L1 3867 6154 0 2527 228 43 9 chr5 81853335 81854141 -121231391 + L1MC4 LINE L1 6915 7900 -142 192 291 36 0 chr5 81854280 81854335 -121231197 + L2 LINE L2 3249 3305 -8 649 249 178 0 chr5 81854414 81854599 -121230933 - MIR SINE MIR -7 255 38 1311 288 74 9 chr5 81855872 81856303 -121229229 + LTR16C LTR ERVL 33 491 0 294 29 0 0 chr5 81857778 81857813 -121227719 + (CA)n Simple_repeat Simple_repeat 1 35 0 276 315 37 46 chr5 81857857 81857965 -121227567 + L2 LINE L2 3195 3301 -12 2281 118 7 0 chr5 81858142 81858448 -121227084 - AluSx SINE Alu -4 308 1 209 306 83 0 chr5 81858714 81858786 -121226746 + L2 LINE L2 3182 3259 -13 189 0 0 0 chr5 81858786 81858807 -121226725 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 2323 94 0 0 chr5 81858938 81859235 -121226297 + AluSg SINE Alu 1 297 -13 369 265 36 82 chr5 81859249 81859510 -121226022 + LTR16A1 LTR ERVL 185 400 -57 2062 131 3 13 chr5 81861109 81861414 -121224118 + AluSx SINE Alu 1 302 -10 392 208 90 0 chr5 81862584 81862683 -121222849 - L1ME1 LINE L1 -223 5943 5847 240 283 92 54 chr5 81862684 81862868 -121222664 - MLT1L LTR MaLR -228 387 197 231 154 26 0 chr5 81862858 81862897 -121222635 - LTR67 LTR ERVL -410 147 108 * 564 301 6 18 chr5 81863126 81863289 -121222243 + MIR SINE MIR 102 262 0 308 295 58 40 chr5 81863381 81863554 -121221978 - L2 LINE L2 -210 3062 2887 230 279 63 13 chr5 81863574 81863653 -121221879 - MIR SINE MIR -21 241 159 1273 203 56 101 chr5 81863653 81863697 -121221835 - MLT2C2 LTR ERVL 0 464 420 1703 181 70 28 chr5 81863697 81864056 -121221476 - MLT1A2 LTR MaLR 0 374 1 1273 203 56 101 chr5 81864056 81864494 -121221038 - MLT2C2 LTR ERVL -44 420 4 315 216 43 78 chr5 81864510 81864645 -121220887 - MIR SINE MIR -68 140 5 710 199 39 68 chr5 81864877 81865083 -121220449 - MER3 DNA MER1_type 0 209 10 4313 223 68 55 chr5 81866083 81866537 -121218995 + L1MDa LINE L1 31 478 -6062 1383 216 120 38 chr5 81866537 81866903 -121218629 + MSTD LTR MaLR 1 396 0 4313 223 68 55 chr5 81866903 81867259 -121218273 + L1MDa LINE L1 478 828 -5712 2879 142 12 5 chr5 81867259 81867681 -121217851 + MSTB LTR MaLR 2 426 0 4313 223 68 55 chr5 81867681 81867732 -121217800 + L1MDa LINE L1 828 877 -5663 2857 131 11 21 chr5 81867732 81868168 -121217364 - MSTB1 LTR MaLR 0 432 1 4313 223 68 55 chr5 81868168 81868558 -121216974 + L1MDa LINE L1 877 1300 -5240 532 234 78 0 chr5 81868569 81868697 -121216835 - L1M2 LINE L1 -6701 148 11 437 110 0 14 chr5 81868707 81868780 -121216752 + L1MD1 LINE L1 6171 6242 0 840 142 15 22 chr5 81868788 81868922 -121216610 + FLAM_C SINE Alu 1 133 0 1859 178 0 10 chr5 81869780 81869915 -121215617 + AluJb SINE Alu 1 136 -176 2402 90 0 7 chr5 81869915 81870225 -121215307 + AluSg SINE Alu 1 308 -2 1859 178 0 10 chr5 81870225 81870398 -121215134 + AluJb SINE Alu 136 306 -6 430 266 162 0 chr5 81871444 81871598 -121213934 - MIR SINE MIR -65 197 19 1138 110 164 18 chr5 81871639 81871858 -121213674 - MSTA LTR MaLR -177 251 1 216 0 0 0 chr5 81872289 81872313 -121213219 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1471 152 71 50 chr5 81872315 81872598 -121212934 - AluJb SINE Alu -23 289 1 251 367 47 33 chr5 81873059 81873274 -121212258 + L3 LINE CR1 366 583 -994 2843 167 26 0 chr5 81874688 81875150 -121210382 + MLT2B1 LTR ERVL 1 474 -46 271 132 0 57 chr5 81875179 81875232 -121210300 + MLT2B1 LTR ERVL 464 513 -7 465 277 28 14 chr5 81875566 81875707 -121209825 + MIR3 SINE MIR 61 203 -5 216 67 0 0 chr5 81877138 81877168 -121208364 + (CA)n Simple_repeat Simple_repeat 2 31 0 2110 201 77 36 chr5 81877839 81878371 -121207161 + MLT2B3 LTR ERVL 1 554 0 4589 170 31 79 chr5 81878374 81879281 -121206251 + MER6 DNA MER2_type 1 863 -2 1658 121 4 0 chr5 81879337 81879568 -121205964 + AluSg/x SINE Alu 65 296 -16 366 80 0 0 chr5 81879570 81879620 -121205912 + L1MB3 LINE L1 6134 6183 0 240 35 0 0 chr5 81879786 81879815 -121205717 + (T)n Simple_repeat Simple_repeat 1 29 0 2205 122 3 0 chr5 81880336 81880630 -121204902 + AluSx SINE Alu 1 295 -17 958 208 0 0 chr5 81880893 81881052 -121204480 + FAM SINE Alu 5 163 -12 889 272 83 20 chr5 81882085 81882557 -121202975 + L1ME4a LINE L1 5255 5775 -346 612 141 47 47 chr5 81882627 81882776 -121202756 + L1ME4a LINE L1 5969 6117 -4 828 150 0 24 chr5 81882782 81882909 -121202623 - AluJb SINE Alu -187 125 2 27 29 0 0 chr5 81882912 81882946 -121202586 + AT_rich Low_complexity Low_complexity 1 34 0 181 213 191 0 chr5 81883372 81883419 -121202113 + L3 LINE CR1 419 474 -1103 1668 320 102 41 chr5 81883917 81884902 -121200630 + L2 LINE L2 2258 3313 0 183 320 13 0 chr5 81885023 81885101 -121200431 - MIR SINE MIR -114 148 70 319 164 201 60 chr5 81886069 81886169 -121199363 - MER103 DNA DNA -12 154 29 1725 202 56 19 chr5 81886169 81886545 -121198987 + MLT1B LTR MaLR 1 390 0 319 164 201 60 chr5 81886545 81886578 -121198954 - MER103 DNA DNA -137 29 2 2031 137 43 0 chr5 81886613 81886912 -121198620 - AluSx SINE Alu 0 312 1 425 295 124 42 chr5 81887199 81887305 -121198227 - MIR SINE MIR 0 262 166 1419 217 71 6 chr5 81887305 81887628 -121197904 - MER2 DNA MER2_type 0 344 1 425 295 124 42 chr5 81887628 81887762 -121197770 - MIR SINE MIR -96 166 2 1331 233 24 47 chr5 81888395 81888933 -121196599 - MLT2C2 LTR ERVL 0 520 10 295 286 131 32 chr5 81889049 81889301 -121196231 - MLT1J1 LTR MaLR -31 415 139 391 229 30 46 chr5 81889662 81889793 -121195739 + MIR SINE MIR 23 151 -111 689 241 19 144 chr5 81889887 81890034 -121195498 + LTR16A LTR ERVL 121 198 -252 2306 93 7 7 chr5 81890034 81890336 -121195196 + AluSg SINE Alu 5 306 -4 689 241 19 144 chr5 81890336 81890549 -121194983 + LTR16A LTR ERVL 198 436 -14 329 219 12 12 chr5 81890561 81890643 -121194889 + MIR SINE MIR 175 256 -6 309 231 58 19 chr5 81892570 81892652 -121192880 + MIR SINE MIR 95 183 -79 3596 192 54 45 chr5 81892652 81893470 -121192062 - LTR1B LTR ERV1 -1 825 1 309 231 58 19 chr5 81893470 81893491 -121192041 + MIR SINE MIR 183 202 -60 345 250 60 103 chr5 81894956 81895140 -121190392 - MER5A DNA MER1_type -5 184 9 21 0 0 0 chr5 81895640 81895661 -121189871 + AT_rich Low_complexity Low_complexity 1 21 0 2128 103 0 0 chr5 81896460 81896733 -121188799 - AluSx SINE Alu -39 273 1 316 315 182 0 chr5 81897039 81897182 -121188350 + MIR SINE MIR 82 250 -12 2826 194 26 22 chr5 81897810 81898428 -121187104 + Tigger7 DNA MER2_type 8 622 -1965 1989 138 38 66 chr5 81898428 81898651 -121186881 + MER1B DNA MER1_type 1 212 -2498 2328 74 0 29 chr5 81898651 81899003 -121186529 + AluY SINE Alu 1 311 0 1989 138 38 66 chr5 81899003 81899126 -121186406 + MER1B DNA MER1_type 212 337 0 2826 194 26 22 chr5 81899126 81899208 -121186324 + Tigger7 DNA MER2_type 622 2587 0 405 336 60 3 chr5 81899597 81899795 -121185737 - MIR SINE MIR -31 231 19 413 208 42 69 chr5 81899940 81900084 -121185448 + MER5B DNA MER1_type 37 176 -2 29 28 0 0 chr5 81900221 81900257 -121185275 + AT_rich Low_complexity Low_complexity 1 36 0 * 5236 182 67 76 chr5 81900243 81901476 -121184056 + MER39-int LTR ERV1 3198 6183 -148 1069 223 135 53 chr5 81901525 81901893 -121183639 + MER39 LTR ERV1 1 579 -128 236 167 58 108 chr5 81902286 81902333 -121183199 + L1ME4a LINE L1 5785 5833 -288 1835 133 3 36 chr5 81902333 81902658 -121182874 + AluSx SINE Alu 1 312 0 236 167 58 108 chr5 81902658 81902730 -121182802 + L1ME4a LINE L1 5833 5898 -223 362 234 11 74 chr5 81902962 81903137 -121182395 + L1ME4a LINE L1 5927 6090 -31 232 209 0 0 chr5 81903577 81903620 -121181912 - MER5A DNA MER1_type 0 189 147 612 243 35 53 chr5 81903630 81903770 -121181762 - MER58 DNA MER1_type -119 222 81 2162 114 0 0 chr5 81903770 81904050 -121181482 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr5 81904050 81904075 -121181457 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 612 243 35 53 chr5 81904075 81904159 -121181373 - MER58 DNA MER1_type -258 83 1 652 287 92 21 chr5 81904174 81904248 -121181284 - L1MC/D LINE L1 -526 5644 5577 2314 123 41 23 chr5 81904248 81904590 -121180942 + MER7A DNA MER2_type 1 346 0 652 287 92 21 chr5 81904590 81905227 -121180305 - L1MC/D LINE L1 -593 5577 4963 349 193 12 48 chr5 81905976 81906059 -121179473 - MER116 DNA Mariner 0 80 1 4227 184 35 39 chr5 81907488 81908305 -121177227 - MER21B LTR ERV1 -49 814 1 512 119 12 36 chr5 81908394 81908478 -121177054 - MER21B-int LTR ERV1 -52 4139 4058 395 198 176 0 chr5 81908513 81908604 -121176928 - MLT1K LTR MaLR -106 482 376 387 226 47 38 chr5 81908810 81908916 -121176616 + MIR SINE MIR 34 140 -68 193 246 16 49 chr5 81909113 81909174 -121176358 + MIR3 SINE MIR 148 206 -2 25 31 0 0 chr5 81909759 81909791 -121175741 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr5 81910914 81910938 -121174594 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 481 149 0 14 chr5 81910938 81911002 -121174530 - AluJ/FRAM SINE Alu -30 282 218 809 153 0 0 chr5 81911024 81911148 -121174384 - FLAM_C SINE Alu -19 124 1 1879 202 5 47 chr5 81911862 81912023 -121173509 + MLT1A1 LTR MaLR 1 167 -198 2272 110 0 0 chr5 81912023 81912322 -121173210 + AluSq SINE Alu 1 299 -14 1879 202 5 47 chr5 81912322 81912541 -121172991 + MLT1A1 LTR MaLR 167 365 0 221 241 241 0 chr5 81913257 81913344 -121172188 + L2 LINE L2 3162 3269 -3 24 0 0 0 chr5 81913688 81913712 -121171820 + AT_rich Low_complexity Low_complexity 1 24 0 337 205 116 27 chr5 81918075 81918187 -121167345 + L1ME4a LINE L1 6000 6121 0 1789 133 22 60 chr5 81918254 81918421 -121167111 - AluSx SINE Alu -7 305 133 856 23 61 0 chr5 81918421 81918553 -121166979 + (TTTTA)n Simple_repeat Simple_repeat 1 140 0 2384 60 0 0 chr5 81918554 81918836 -121166696 - AluY SINE Alu -29 282 1 1789 133 22 60 chr5 81918836 81918983 -121166549 - AluSx SINE Alu -178 134 1 978 230 0 0 chr5 81919890 81920068 -121165464 - MER45A DNA AcHobo 0 178 1 242 256 26 26 chr5 81921221 81921299 -121164233 - MIR SINE MIR -6 256 179 182 346 30 10 chr5 81921316 81921417 -121164115 - MIR3 SINE MIR -94 114 12 413 277 176 11 chr5 81921845 81922033 -121163499 + MIR SINE MIR 44 262 0 2961 112 26 7 chr5 81923665 81924084 -121161448 + MSTC LTR MaLR 2 428 0 1902 198 65 28 chr5 81924084 81924518 -121161014 + LTR40b LTR ERVL 13 462 0 3557 108 14 2 chr5 81926536 81927027 -121158505 - L1PA13 LINE L1 -5 6158 5662 234 202 28 119 chr5 81928683 81928792 -121156740 + MARNA DNA Mariner 485 583 -3 351 224 0 13 chr5 81930620 81930696 -121154836 - MER5A DNA MER1_type 0 189 115 182 374 40 30 chr5 81930793 81930892 -121154640 + L2 LINE L2 3154 3253 -19 249 108 0 0 chr5 81931317 81931354 -121154178 + (TCC)n Simple_repeat Simple_repeat 3 39 0 2225 127 0 6 chr5 81931715 81932029 -121153503 - AluSx SINE Alu 0 312 1 534 263 78 29 chr5 81932121 81932326 -121153206 - MIR SINE MIR -6 256 42 367 315 50 0 chr5 81932449 81932617 -121152915 - MER20B DNA MER1_type -4 215 31 297 291 81 40 chr5 81932931 81933079 -121152453 + MIR SINE MIR 96 249 -13 374 269 123 8 chr5 81933109 81933239 -121152293 + MIR3 SINE MIR 26 170 -38 2291 110 0 3 chr5 81933632 81933931 -121151601 + AluSx SINE Alu 1 298 -14 450 271 49 15 chr5 81934649 81934817 -121150715 - MIR3 SINE MIR -19 189 15 201 147 0 0 chr5 81935105 81935139 -121150393 + (GGA)n Simple_repeat Simple_repeat 3 36 0 595 264 30 12 chr5 81935152 81935319 -121150213 - MIR SINE MIR -21 241 72 1839 121 0 81 chr5 81935703 81936046 -121149486 - AluSx SINE Alu 0 318 1 1461 200 30 10 chr5 81937294 81937594 -121147938 - AluJb SINE Alu -5 307 2 2410 113 51 20 chr5 81937744 81938097 -121147435 + THE1B LTR MaLR 1 364 0 13059 78 2 4 chr5 81938097 81939680 -121145852 + THE1B-int LTR MaLR 1 1580 0 2027 143 76 15 chr5 81939680 81940022 -121145510 + THE1B LTR MaLR 1 363 -1 375 250 73 8 chr5 81940707 81940831 -121144701 + MIR SINE MIR 61 192 -70 236 250 56 14 chr5 81941063 81941135 -121144397 + Charlie4 DNA MER1_type 1866 1940 -21 249 337 92 61 chr5 81942004 81942167 -121143365 - L2 LINE L2 -3 3269 3102 377 279 84 96 chr5 81943340 81943568 -121141964 + L2 LINE L2 2579 2803 -511 2124 131 7 0 chr5 81943568 81943866 -121141666 + AluSq SINE Alu 1 300 -13 377 279 84 96 chr5 81943866 81943970 -121141562 + L2 LINE L2 2803 2907 -407 1884 129 43 3 chr5 81944378 81944681 -121140851 + L1MA4A LINE L1 5986 6300 -3 290 323 46 39 chr5 81944870 81945000 -121140532 + L2 LINE L2 3015 3145 -127 22 0 0 0 chr5 81945882 81945904 -121139628 + AT_rich Low_complexity Low_complexity 1 22 0 16384 120 37 6 chr5 81946536 81948882 -121136650 + Tigger1 DNA MER2_type 1 2418 0 1238 181 0 14 chr5 81948920 81949141 -121136391 + AluJb SINE Alu 88 305 -7 659 316 67 43 chr5 81949148 81949909 -121135623 + L1MEd LINE L1 792 1625 -865 306 276 86 53 chr5 81950585 81950737 -121134795 - MER5A DNA MER1_type -1 188 32 540 236 103 55 chr5 81950908 81951073 -121134459 + MIR3 SINE MIR 33 205 -3 630 180 63 0 chr5 81952147 81952258 -121133274 - FLAM_A SINE Alu -19 123 6 2436 84 0 7 chr5 81952279 81952589 -121132943 - AluSq SINE Alu -5 308 1 374 326 90 17 chr5 81953684 81953862 -121131670 - L2 LINE L2 -2 3270 3080 2215 128 0 0 chr5 81953882 81954187 -121131345 - AluSx SINE Alu -7 305 1 2165 124 16 0 chr5 81954752 81955059 -121130473 - AluSx SINE Alu 0 312 1 1746 182 4 0 chr5 81957000 81957280 -121128252 + AluJb SINE Alu 12 292 -20 22 35 0 0 chr5 81957834 81957863 -121127669 + AT_rich Low_complexity Low_complexity 1 29 0 1635 111 127 12 chr5 81959163 81959443 -121126089 + AluSg SINE Alu 1 309 0 281 279 224 40 chr5 81959454 81959655 -121125877 - MIR SINE MIR -12 250 13 2347 88 0 0 chr5 81960486 81960783 -121124749 + AluY SINE Alu 1 297 -14 286 269 29 48 chr5 81960809 81960913 -121124619 + L2 LINE L2 2304 2405 -909 492 306 107 71 chr5 81960976 81961354 -121124178 + L2 LINE L2 2373 2736 -577 2191 115 0 0 chr5 81961354 81961642 -121123890 + AluSq SINE Alu 1 288 -25 492 306 107 71 chr5 81961642 81962177 -121123355 + L2 LINE L2 2736 3313 0 267 284 157 0 chr5 81963719 81963821 -121121711 - L2 LINE L2 0 3272 3155 501 305 40 7 chr5 81964859 81965010 -121120522 - MIR SINE MIR -87 175 20 213 94 0 0 chr5 81965687 81965719 -121119813 + (CAT)n Simple_repeat Simple_repeat 1 32 0 392 268 31 10 chr5 81965724 81965821 -121119711 - L2 LINE L2 -33 3239 3141 348 323 146 0 chr5 81965869 81966033 -121119499 - MIR SINE MIR -46 216 29 193 366 146 19 chr5 81966379 81966592 -121118940 + L2 LINE L2 3033 3272 0 373 269 67 0 chr5 81966705 81966809 -121118723 - MIR3 SINE MIR -9 199 89 230 217 174 61 chr5 81967441 81967498 -121118034 + L2 LINE L2 3171 3220 -93 1553 178 6 51 chr5 81967498 81967813 -121117719 - AluJo SINE Alu -11 301 1 230 217 174 61 chr5 81967813 81967870 -121117662 + L2 LINE L2 3220 3298 -15 439 333 71 8 chr5 81967904 81968159 -121117373 - MLT1J LTR MaLR 0 511 241 2905 161 12 16 chr5 81968233 81968420 -121117112 - L1MB3 LINE L1 0 6183 5997 2755 109 20 0 chr5 81968420 81968777 -121116755 - THE1B LTR MaLR 0 364 1 2905 161 12 16 chr5 81968777 81969087 -121116445 - L1MB3 LINE L1 -186 5997 5688 321 308 25 0 chr5 81969626 81969746 -121115786 + MER103 DNA DNA 43 165 -1 513 287 107 64 chr5 81970018 81970718 -121114814 - L2 LINE L2 -35 3237 2493 686 212 33 88 chr5 81972078 81972384 -121113148 + L1MC5 LINE L1 7636 7924 -37 223 255 0 0 chr5 81973172 81973219 -121112313 + GA-rich Low_complexity Low_complexity 2 48 0 200 211 0 18 chr5 81973231 81973288 -121112244 + GA-rich Low_complexity Low_complexity 2 57 0 236 295 0 0 chr5 81974636 81974697 -121110835 + (TG)n Simple_repeat Simple_repeat 1 61 0 299 240 10 0 chr5 81974711 81974815 -121110717 + (TG)n Simple_repeat Simple_repeat 2 106 0 1924 137 3 31 chr5 81975818 81976148 -121109384 + AluSx SINE Alu 1 322 0 2250 125 0 0 chr5 81976397 81976700 -121108832 + AluSq SINE Alu 1 303 -10 5447 96 34 4 chr5 81976725 81977515 -121108017 + L1PB1 LINE L1 5337 6150 -1 22 0 0 0 chr5 81977515 81977537 -121107995 + AT_rich Low_complexity Low_complexity 1 22 0 599 270 190 5 chr5 81977577 81977788 -121107744 + MIR SINE MIR 12 261 -1 2123 123 3 0 chr5 81977801 81978142 -121107390 - AluSq SINE Alu 0 342 1 233 236 327 18 chr5 81979019 81979129 -121106403 + L1ME LINE L1 5600 5743 -378 2393 97 0 0 chr5 81979379 81979677 -121105855 + AluSx SINE Alu 1 298 -14 281 334 39 34 chr5 81980704 81980863 -121104669 - MIR SINE MIR -63 145 22 11666 187 24 28 chr5 81982834 81983202 -121102330 - L1PA16 LINE L1 -1 6165 5797 249 33 0 0 chr5 81983202 81983232 -121102300 + (TA)n Simple_repeat Simple_repeat 1 30 0 11666 187 24 28 chr5 81983232 81983967 -121101565 - L1PA16 LINE L1 -369 5797 5061 2364 94 0 0 chr5 81983967 81984274 -121101258 - AluSg SINE Alu -3 307 1 11666 187 24 28 chr5 81984274 81986746 -121098786 - L1PA16 LINE L1 -1105 5061 2607 1533 196 76 47 chr5 81987789 81988271 -121097261 + MER39 LTR ERV1 1 707 0 1718 208 139 94 chr5 81988348 81989203 -121096329 - MER97a DNA MER1_type 0 894 1 2474 93 0 0 chr5 81989397 81989709 -121095823 + AluSx SINE Alu 1 312 0 2237 132 0 0 chr5 81990123 81990433 -121095099 + AluSx SINE Alu 1 310 -2 258 188 78 0 chr5 81990537 81990601 -121094931 - MIR SINE MIR -1 261 193 234 340 102 16 chr5 81991124 81991308 -121094224 + MIR3 SINE MIR 4 213 -49 1698 172 10 3 chr5 81991439 81991730 -121093802 + AluJo SINE Alu 1 293 -19 2026 171 14 17 chr5 81992485 81992830 -121092702 + MER2 DNA MER2_type 1 344 0 822 275 32 52 chr5 81993284 81993551 -121091981 + MIR SINE MIR 1 262 0 2152 105 3 0 chr5 81994396 81994681 -121090851 + AluSq SINE Alu 1 286 -27 2376 97 7 0 chr5 81996177 81996486 -121089046 - AluSq SINE Alu -2 311 1 291 242 16 0 chr5 81996501 81996563 -121088969 - L3 LINE CR1 -2 1575 1513 229 340 50 10 chr5 81996903 81997003 -121088529 + L2 LINE L2 3201 3304 -9 1877 173 0 3 chr5 81997100 81997406 -121088126 + AluJb SINE Alu 6 310 -2 508 277 81 0 chr5 81997528 81997676 -121087856 - MIR SINE MIR -1 261 102 2053 122 20 26 chr5 81998317 81998621 -121086911 - AluSx SINE Alu -10 302 1 2000 133 13 23 chr5 81998621 81998930 -121086602 - L1MC1 LINE L1 -8 6325 6020 1821 107 0 0 chr5 81999581 81999815 -121085717 + AluSq SINE Alu 1 234 -79 259 384 63 21 chr5 81999919 82000109 -121085423 - L2 LINE L2 -408 2906 2709 808 179 7 0 chr5 82000114 82000126 -121085406 - FRAM SINE Alu -138 174 164 282 29 0 0 chr5 82000126 82000161 -121085371 + (TG)n Simple_repeat Simple_repeat 2 36 0 808 179 7 0 chr5 82000161 82000299 -121085233 - FRAM SINE Alu -148 164 23 4022 84 4 8 chr5 82000299 82000824 -121084708 - MER41A LTR ERV1 0 554 32 605 188 0 0 chr5 82000824 82000920 -121084612 - AluJ/FLAM SINE Alu -215 97 2 275 353 149 25 chr5 82000920 82001362 -121084170 - L2 LINE L2 -599 2715 2219 257 131 197 0 chr5 82003470 82003531 -121082001 - MLT1J LTR MaLR 0 511 439 235 325 24 12 chr5 82003712 82003795 -121081737 - MLT1L LTR MaLR -327 288 205 22 0 0 0 chr5 82004565 82004587 -121080945 + AT_rich Low_complexity Low_complexity 1 22 0 185 167 0 28 chr5 82005423 82005459 -121080073 - MIR SINE MIR -6 256 222 * 296 287 82 41 chr5 82005430 82005552 -121079980 - L2 LINE L2 -37 3235 3109 3551 74 45 21 chr5 82005959 82006083 -121079449 - MER41A LTR ERV1 0 635 515 2096 110 0 4 chr5 82006083 82006364 -121079168 + AluSx SINE Alu 1 280 -32 3551 74 45 21 chr5 82006364 82006851 -121078681 - MER41A LTR ERV1 -120 515 1 403 266 31 16 chr5 82006885 82007013 -121078519 + Charlie2 DNA MER1_type 6 135 -2727 865 217 92 12 chr5 82007209 82007458 -121078074 + Charlie2a DNA MER1_type 744 1012 -1850 512 217 9 0 chr5 82007462 82007568 -121077964 + Charlie2a DNA MER1_type 2750 2856 -6 282 246 187 15 chr5 82007640 82007774 -121077758 + MER103 DNA DNA 3 159 -7 2069 111 7 3 chr5 82007998 82008295 -121077237 - AluSx SINE Alu -14 298 1 2010 127 10 3 chr5 82008305 82008605 -121076927 - AluSg SINE Alu -8 302 1 430 297 62 0 chr5 82009503 82009631 -121075901 + L2 LINE L2 3137 3272 0 186 43 0 0 chr5 82010363 82010386 -121075146 + (TA)n Simple_repeat Simple_repeat 2 24 0 815 191 0 7 chr5 82010824 82010960 -121074572 + AluJo SINE Alu 2 136 -176 2493 70 0 13 chr5 82010988 82011303 -121074229 + AluY SINE Alu 1 311 0 351 0 0 0 chr5 82012188 82012227 -121073305 + (TG)n Simple_repeat Simple_repeat 2 40 0 980 190 0 0 chr5 82012428 82012586 -121072946 - AluJb SINE Alu -154 158 1 304 230 108 0 chr5 82012586 82012660 -121072872 + MER63A DNA MER1_type 103 184 -26 1667 148 0 58 chr5 82012822 82013132 -121072400 - AluJo SINE Alu -20 292 1 540 312 33 73 chr5 82014089 82014245 -121071287 - L2 LINE L2 0 3272 3134 993 186 0 0 chr5 82014245 82014406 -121071126 + FRAM SINE Alu 1 161 -5 540 312 33 73 chr5 82014406 82014579 -121070953 - L2 LINE L2 -138 3134 2956 2375 158 18 0 chr5 82015170 82015563 -121069969 + L1 LINE L1 3884 4283 -1863 612 302 83 34 chr5 82015763 82015935 -121069597 - L1ME4a LINE L1 -239 5882 5720 2041 151 3 6 chr5 82015935 82016247 -121069285 - AluSx SINE Alu -1 311 1 612 302 83 34 chr5 82016247 82016425 -121069107 - L1ME4a LINE L1 -401 5720 5515 6224 169 28 33 chr5 82016544 82018942 -121066590 + L1MA6 LINE L1 3636 5965 -335 2139 104 17 0 chr5 82018942 82019230 -121066302 + AluSx SINE Alu 1 293 -19 6224 169 28 33 chr5 82019230 82019565 -121065967 + L1MA6 LINE L1 5965 6300 0 2086 143 0 6 chr5 82019568 82019882 -121065650 + AluSq SINE Alu 1 312 -1 2134 141 0 0 chr5 82020044 82020348 -121065184 + AluSq SINE Alu 1 304 -9 218 301 19 10 chr5 82020574 82020595 -121064937 + (TA)n Simple_repeat Simple_repeat 1 20 -84 1961 154 97 6 chr5 82020595 82020914 -121064618 + MER7A DNA MER2_type 1 346 0 218 301 19 10 chr5 82020914 82020995 -121064537 + (TA)n Simple_repeat Simple_repeat 20 104 0 225 184 0 41 chr5 82020999 82021048 -121064484 + L1MC4 LINE L1 6656 6702 -1340 189 0 0 0 chr5 82021257 82021278 -121064254 + (A)n Simple_repeat Simple_repeat 1 21 0 2310 104 3 7 chr5 82021288 82021597 -121063935 + AluSq SINE Alu 1 308 -5 282 280 160 10 chr5 82021611 82021711 -121063821 + MARNA DNA Mariner 88 202 -384 2050 121 3 0 chr5 82021901 82022225 -121063307 - AluSp SINE Alu 0 325 1 823 268 27 121 chr5 82022558 82022653 -121062879 - MER34 LTR ERV1 -35 507 405 672 206 48 8 chr5 82022653 82022779 -121062753 - FLAM_A SINE Alu -2 131 1 823 268 27 121 chr5 82022779 82023243 -121062289 - MER34 LTR ERV1 -137 405 1 1095 198 122 30 chr5 82024777 82025105 -121060427 + MER20B DNA MER1_type 29 386 -397 273 182 208 0 chr5 82025309 82025386 -121060146 + MER20B DNA MER1_type 543 635 -148 877 197 106 77 chr5 82025415 82025765 -121059767 + LTR16A LTR ERVL 28 387 -63 381 229 86 21 chr5 82025808 82025948 -121059584 + MER20B DNA MER1_type 635 783 0 2027 79 76 7 chr5 82026376 82026653 -121058879 - AluSp SINE Alu -17 296 1 247 152 15 15 chr5 82026776 82026842 -121058690 + (TG)n Simple_repeat Simple_repeat 1 66 0 1845 163 7 0 chr5 82028000 82028288 -121057244 + AluJo SINE Alu 1 290 -22 282 73 0 0 chr5 82029363 82029404 -121056128 + (CA)n Simple_repeat Simple_repeat 1 41 0 332 263 12 117 chr5 82029545 82029660 -121055872 + MER5B DNA MER1_type 22 115 -63 1549 124 12 108 chr5 82029660 82029983 -121055549 - AluSx SINE Alu -20 292 1 332 263 12 117 chr5 82029983 82030038 -121055494 + MER5B DNA MER1_type 115 174 -4 3505 126 62 67 chr5 82031351 82031968 -121053564 - LTR18B LTR ERVL 0 614 1 464 261 25 25 chr5 82033123 82033280 -121052252 - LTR16B LTR ERVL -4 460 304 1824 137 16 38 chr5 82033311 82033448 -121052084 + AluJb SINE Alu 3 142 -170 234 0 0 0 chr5 82033448 82033474 -121052058 + (CA)n Simple_repeat Simple_repeat 1 26 0 1824 137 16 38 chr5 82033474 82033649 -121051883 + AluJb SINE Alu 142 308 -4 475 148 148 71 chr5 82035114 82035296 -121050236 - MER21B LTR ERV1 -35 828 633 4031 158 84 12 chr5 82035309 82036058 -121049474 - LTR1B LTR ERV1 -23 803 1 2690 200 112 35 chr5 82036058 82036693 -121048839 - MER21B LTR ERV1 -179 684 1 1918 147 26 37 chr5 82036853 82037201 -121048331 - L1MC1 LINE L1 -7 6326 5983 192 40 0 0 chr5 82037716 82037741 -121047791 + (GA)n Simple_repeat Simple_repeat 2 26 0 2966 171 16 32 chr5 82038710 82039273 -121046259 - MER89 LTR ERV1 0 559 6 574 240 26 19 chr5 82039661 82039815 -121045717 + MIR SINE MIR 89 243 -19 292 311 43 18 chr5 82039852 82040016 -121045516 - MIR SINE MIR 0 262 95 237 221 151 47 chr5 82040018 82040104 -121045428 + MIR SINE MIR 156 250 -12 1856 146 11 97 chr5 82040146 82040379 -121045153 + MER1B DNA MER1_type 1 192 -2520 1072 79 286 0 chr5 82040379 82040557 -121044975 + MER30 DNA MER1_type 2 230 0 1856 146 11 97 chr5 82040557 82040694 -121044838 + MER1B DNA MER1_type 192 339 0 361 280 31 108 chr5 82040743 82041068 -121044464 + MLT1J LTR MaLR 23 322 -189 21 0 0 0 chr5 82044974 82044995 -121040537 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 82046072 82046094 -121039438 + (CAA)n Simple_repeat Simple_repeat 3 24 0 208 313 25 12 chr5 82046875 82046955 -121038577 - MIR3 SINE MIR -20 188 108 2125 122 10 0 chr5 82047462 82047756 -121037776 + AluSx SINE Alu 1 297 -15 573 270 40 40 chr5 82048648 82048874 -121036658 + MIR SINE MIR 31 256 -6 583 210 85 74 chr5 82048892 82049022 -121036510 + MER5B DNA MER1_type 1 135 -43 2362 80 3 0 chr5 82049022 82049335 -121036197 + AluY SINE Alu 1 311 0 583 210 85 74 chr5 82049335 82049380 -121036152 + MER5B DNA MER1_type 135 178 0 24 0 0 0 chr5 82051390 82051414 -121034118 + AT_rich Low_complexity Low_complexity 1 24 0 1339 146 102 4 chr5 82052020 82052246 -121033286 - AluJo SINE Alu -26 286 39 342 0 0 0 chr5 82052646 82052684 -121032848 + (TG)n Simple_repeat Simple_repeat 2 39 0 251 93 23 0 chr5 82055733 82055776 -121029756 + (GGA)n Simple_repeat Simple_repeat 3 46 0 286 211 13 26 chr5 82056728 82056804 -121028728 - MIR3 SINE MIR -53 155 81 434 258 33 0 chr5 82059806 82059926 -121025606 + MIR SINE MIR 59 182 -80 241 235 141 12 chr5 82060754 82060839 -121024693 - L2 LINE L2 0 3272 3177 * 382 242 39 45 chr5 82060812 82060984 -121024548 + MIR SINE MIR 5 171 -62 2444 72 0 16 chr5 82061173 82061480 -121024052 - AluY SINE Alu -9 302 1 190 220 20 0 chr5 82062651 82062701 -121022831 + MIR SINE MIR 168 218 -44 373 255 38 34 chr5 82063946 82064101 -121021431 - MIR SINE MIR -62 146 34 2413 84 0 3 chr5 82065253 82065552 -121019980 + AluSg SINE Alu 2 299 -11 714 245 63 17 chr5 82065908 82066145 -121019387 - MIR SINE MIR -1 261 14 241 254 0 0 chr5 82066668 82066739 -121018793 + L1M4 LINE L1 4303 4373 -1773 752 203 18 0 chr5 82066753 82066916 -121018616 + FAM SINE Alu 1 166 -9 2343 119 0 0 chr5 82067047 82067359 -121018173 + AluSx SINE Alu 1 312 0 225 268 103 10 chr5 82068065 82068162 -121017370 - L2 LINE L2 -558 2756 2651 1809 137 9 71 chr5 82068671 82068993 -121016539 - AluSx SINE Alu -10 302 1 288 330 20 0 chr5 82069171 82069280 -121016252 - MIR SINE MIR -68 140 41 1996 104 0 75 chr5 82069532 82069903 -121015629 + AluSx SINE Alu 1 348 0 2166 110 0 23 chr5 82069971 82070270 -121015262 - AluSx SINE Alu -20 292 1 958 266 80 14 chr5 82070604 82070969 -121014563 + L2 LINE L2 2863 3251 -62 1004 259 97 66 chr5 82071808 82072268 -121013264 + MER77 LTR ERV1 144 597 -8 188 351 26 13 chr5 82072590 82072667 -121012865 - MIR SINE MIR -102 106 29 582 264 53 95 chr5 82073587 82073871 -121011661 + MLT1L LTR MaLR 121 392 -223 300 27 0 0 chr5 82074370 82074407 -121011125 + (GA)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr5 82074775 82074797 -121010735 + AT_rich Low_complexity Low_complexity 1 22 0 459 0 0 0 chr5 82074872 82074923 -121010609 + (TG)n Simple_repeat Simple_repeat 2 52 0 195 42 0 0 chr5 82074922 82074946 -121010586 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 543 188 0 10 chr5 82074947 82075043 -121010489 - FLAM_C SINE Alu -36 107 13 231 229 242 19 chr5 82075426 82075583 -121009949 - L1ME4a LINE L1 -2 6119 5928 266 244 49 12 chr5 82075592 82075674 -121009858 - L1ME4a LINE L1 -238 5883 5799 418 312 111 38 chr5 82075832 82076175 -121009357 - L1ME4a LINE L1 -407 5714 5347 280 297 10 20 chr5 82076201 82076302 -121009230 - MIR SINE MIR -117 145 46 2212 104 0 0 chr5 82076568 82076848 -121008684 - AluSq SINE Alu -32 281 2 1818 165 3 32 chr5 82077202 82077332 -121008200 + AluJo SINE Alu 1 133 -179 2214 115 0 0 chr5 82077332 82077628 -121007904 + AluSq SINE Alu 1 296 -17 1818 165 3 32 chr5 82077628 82077812 -121007720 + AluJo SINE Alu 133 306 -6 371 261 165 48 chr5 82078313 82078646 -121006886 + L1ME4a LINE L1 5575 5946 -175 207 0 0 0 chr5 82078773 82078796 -121006736 + (TG)n Simple_repeat Simple_repeat 2 24 0 2176 98 10 17 chr5 82080491 82080787 -121004745 + AluSp SINE Alu 1 294 -19 264 30 0 0 chr5 82081552 82081585 -121003947 + (TG)n Simple_repeat Simple_repeat 1 66 0 264 30 0 0 chr5 82081585 82081618 -121003914 + (TG)n Simple_repeat Simple_repeat 2 34 0 278 313 202 5 chr5 82081808 82082016 -121003516 + MIR SINE MIR 14 262 0 1361 157 45 5 chr5 82082311 82082534 -121002998 - AluSq SINE Alu -4 309 78 260 304 90 19 chr5 82082754 82083020 -121002512 - L1ME4a LINE L1 -1099 5047 4763 3796 203 72 65 chr5 82083325 82084431 -121001101 + LTR28 LTR ERV1 1 636 0 1424 190 63 77 chr5 82084623 82085066 -121000466 + L1ME1 LINE L1 5726 6162 -4 230 362 11 21 chr5 82085097 82085191 -121000341 - MER5B DNA MER1_type -81 97 5 301 305 50 50 chr5 82086936 82087136 -120998396 + LTR67 LTR ERVL 97 296 -261 336 281 21 0 chr5 82087202 82087298 -120998234 + LTR67 LTR ERVL 431 528 -29 980 224 96 86 chr5 82087298 82087680 -120997852 - LTR24B LTR ERV1 0 635 195 2486 80 0 3 chr5 82087680 82087992 -120997540 + AluY SINE Alu 1 311 0 980 224 96 86 chr5 82087992 82088189 -120997343 - LTR24B LTR ERV1 -440 195 1 2037 146 81 65 chr5 82088339 82088798 -120996734 - MER31B LTR ERV1 0 466 1 532 313 44 50 chr5 82088892 82089189 -120996343 - L2 LINE L2 -383 2931 2637 252 296 0 0 chr5 82089401 82089472 -120996060 + L1ME LINE L1 4531 4601 -1545 771 101 0 9 chr5 82089558 82089667 -120995865 - LTR23 LTR ERV1 -31 406 299 684 118 0 146 chr5 82089672 82089816 -120995716 - FLAM_C SINE Alu -16 127 5 1874 137 18 0 chr5 82089844 82090129 -120995403 + AluSx SINE Alu 1 290 -22 1282 118 77 98 chr5 82090151 82090236 -120995296 - LTR23 LTR ERV1 -155 282 197 2173 87 18 0 chr5 82090236 82090538 -120994994 - AluY SINE Alu 0 308 2 1282 118 77 98 chr5 82090538 82090738 -120994794 - LTR23 LTR ERV1 -240 197 2 264 122 0 0 chr5 82090831 82090872 -120994660 + (T)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr5 82091048 82091070 -120994462 + AT_rich Low_complexity Low_complexity 1 22 0 1040 169 32 0 chr5 82091072 82091261 -120994271 - L1PB3 LINE L1 -4 6150 5956 2318 81 0 3 chr5 82091373 82091700 -120993832 + AluSq SINE Alu 1 326 0 548 309 96 26 chr5 82091738 82092230 -120993302 + L1ME LINE L1 4789 5314 -832 246 159 0 0 chr5 82092273 82092317 -120993215 + L1ME LINE L1 5389 5432 -689 232 125 50 0 chr5 82092439 82092479 -120993053 + MLT1F1 LTR MaLR 523 564 -3 431 310 19 6 chr5 82092496 82092654 -120992878 + MLT1F1-int LTR MaLR 6 165 -1206 299 294 38 19 chr5 82092670 82092830 -120992702 + MLT1F1-int LTR MaLR 309 471 -900 2323 108 7 0 chr5 82092877 82093184 -120992348 + AluSx SINE Alu 1 309 -3 791 262 158 87 chr5 82093383 82093978 -120991554 + MLT1F1-int LTR MaLR 730 1366 -5 402 96 0 0 chr5 82093979 82094031 -120991501 + MLT1F1 LTR MaLR 36 87 -480 286 287 35 49 chr5 82094367 82094510 -120991022 + MIR SINE MIR 52 192 -70 986 171 10 52 chr5 82094591 82094784 -120990748 + MER20 DNA MER1_type 35 219 0 576 238 41 0 chr5 82094802 82094924 -120990608 + FLAM_A SINE Alu 1 127 -6 1708 193 108 54 chr5 82095197 82095435 -120990097 + MLT1F1 LTR MaLR 97 321 -246 2572 61 0 0 chr5 82095435 82095746 -120989786 + AluY SINE Alu 1 311 0 1708 193 108 54 chr5 82095746 82095952 -120989580 + MLT1F1 LTR MaLR 321 565 -2 3986 143 55 35 chr5 82096162 82096654 -120988878 - MER39 LTR ERV1 0 707 195 2298 115 0 0 chr5 82096654 82096958 -120988574 - AluSx SINE Alu -4 308 5 3986 143 55 35 chr5 82096958 82097158 -120988374 - MER39 LTR ERV1 -512 195 1 2215 116 7 0 chr5 82097167 82097477 -120988055 - AluSq SINE Alu -1 312 1 2488 71 3 0 chr5 82098024 82098335 -120987197 - AluSx SINE Alu 0 312 1 343 256 157 80 chr5 82098398 82098811 -120986721 - L1M2 LINE L1 -5489 1360 561 267 363 0 0 chr5 82100765 82100856 -120984676 + L2 LINE L2 3198 3288 -25 397 165 0 13 chr5 82101049 82101128 -120984404 - L1MB2 LINE L1 -3 6168 6091 28 29 0 0 chr5 82101588 82101623 -120983909 + AT_rich Low_complexity Low_complexity 1 35 0 2114 95 0 42 chr5 82101698 82102004 -120983528 - AluSg SINE Alu -17 293 1 667 296 30 5 chr5 82102063 82102262 -120983270 - MLT1L LTR MaLR 0 615 412 514 211 114 66 chr5 82102403 82102569 -120982963 - MER5B DNA MER1_type -3 175 2 531 242 75 97 chr5 82102977 82103378 -120982154 - L1ME4a LINE L1 -7 6114 5723 2218 115 6 6 chr5 82103729 82104061 -120981471 + AluSx SINE Alu 1 332 0 22 0 0 0 chr5 82104648 82104670 -120980862 + AT_rich Low_complexity Low_complexity 1 22 0 318 288 34 42 chr5 82104707 82104943 -120980589 + L1MC4a LINE L1 5674 5907 -1901 1426 138 119 60 chr5 82105577 82105845 -120979687 + AluJb SINE Alu 1 284 -28 383 298 16 78 chr5 82106665 82106923 -120978609 - L2 LINE L2 -835 2479 2238 1837 163 0 10 chr5 82107242 82107542 -120977990 + AluJb SINE Alu 7 303 -9 2036 120 0 17 chr5 82108059 82108350 -120977182 + AluSx SINE Alu 16 301 -11 2326 69 3 7 chr5 82108563 82108853 -120976679 - AluY SINE Alu -10 301 13 2169 100 0 4 chr5 82109279 82109559 -120975973 + AluSg SINE Alu 12 290 -20 3222 107 38 8 chr5 82109609 82110105 -120975427 - MER9 LTR ERVK 0 511 1 1290 173 14 39 chr5 82110634 82110917 -120974615 + AluJb SINE Alu 21 296 -16 2012 123 0 10 chr5 82111582 82111875 -120973657 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr5 82111886 82111908 -120973624 + AT_rich Low_complexity Low_complexity 1 22 0 2511 65 3 0 chr5 82112199 82112509 -120973023 + AluSx SINE Alu 2 312 0 2170 120 7 0 chr5 82113056 82113365 -120972167 + AluSq SINE Alu 1 311 -2 3986 143 55 35 chr5 82113374 82113574 -120971958 + MER39 LTR ERV1 1 195 -512 2276 118 0 0 chr5 82113574 82113878 -120971654 + AluSx SINE Alu 5 308 -4 3986 143 55 35 chr5 82113878 82114370 -120971162 + MER39 LTR ERV1 195 707 0 1612 200 86 79 chr5 82114580 82114808 -120970724 - MLT1F1 LTR MaLR -2 565 340 2374 53 7 0 chr5 82114808 82115093 -120970439 - AluY SINE Alu -24 287 1 1612 200 86 79 chr5 82115093 82115330 -120970202 - MLT1F1 LTR MaLR -227 340 97 627 238 41 0 chr5 82115603 82115725 -120969807 - FLAM_A SINE Alu -6 127 1 983 171 10 52 chr5 82115743 82115936 -120969596 - MER20 DNA MER1_type 0 219 35 318 313 85 35 chr5 82115959 82116160 -120969372 - MIR SINE MIR 0 262 52 400 96 0 0 chr5 82116496 82116548 -120968984 - MLT1F1 LTR MaLR -480 87 36 924 244 170 99 chr5 82116549 82117144 -120968388 - MLT1F1-int LTR MaLR -5 1366 730 2328 107 7 0 chr5 82117351 82117661 -120967871 - AluSx SINE Alu 0 312 1 304 294 38 19 chr5 82117708 82117868 -120967664 - MLT1F1-int LTR MaLR -900 471 309 432 310 19 6 chr5 82117884 82118042 -120967490 - MLT1F1-int LTR MaLR -1206 165 6 236 125 50 0 chr5 82118059 82118099 -120967433 - MLT1F1 LTR MaLR -3 564 523 252 159 0 0 chr5 82118221 82118265 -120967267 - L1ME LINE L1 -689 5432 5389 632 296 81 58 chr5 82118308 82118838 -120966694 - L1ME LINE L1 -832 5314 4798 2295 81 0 3 chr5 82118838 82119161 -120966371 - AluSq SINE Alu 0 322 1 632 296 81 58 chr5 82119161 82119273 -120966259 - L1ME LINE L1 -1348 4798 4653 1104 169 32 0 chr5 82119273 82119462 -120966070 + L1PB3 LINE L1 5956 6150 -4 264 122 0 0 chr5 82119662 82119703 -120965829 + (A)n Simple_repeat Simple_repeat 1 41 0 1293 118 77 98 chr5 82119796 82119996 -120965536 + LTR23 LTR ERV1 2 197 -240 2137 91 18 0 chr5 82119996 82120298 -120965234 + AluY SINE Alu 2 308 0 1293 118 77 98 chr5 82120298 82120383 -120965149 + LTR23 LTR ERV1 197 282 -155 1841 140 18 0 chr5 82120405 82120690 -120964842 - AluSx SINE Alu -22 290 1 696 132 0 146 chr5 82120718 82120862 -120964670 + FLAM_C SINE Alu 5 127 -16 573 123 5 0 chr5 82120862 82120959 -120964573 + LTR56 LTR ERV1 299 404 -41 2271 100 0 0 chr5 82121362 82121652 -120963880 + AluSx SINE Alu 16 305 -7 2361 76 10 17 chr5 82123234 82123535 -120961997 + AluSx SINE Alu 3 301 -11 25 0 0 0 chr5 82123842 82123867 -120961665 + AT_rich Low_complexity Low_complexity 1 25 0 2308 85 14 0 chr5 82123867 82124162 -120961370 - AluSp SINE Alu -14 299 1 2281 103 0 0 chr5 82124166 82124478 -120961054 - AluSc SINE Alu 0 312 1 2078 119 7 3 chr5 82124695 82124989 -120960543 + AluSx SINE Alu 5 299 -13 2196 124 0 3 chr5 82125064 82125363 -120960169 - AluSx SINE Alu -14 298 1 494 249 126 65 chr5 82125383 82125769 -120959763 - L1MC/D LINE L1 -332 5789 5354 2204 122 7 3 chr5 82125791 82126095 -120959437 - AluSx SINE Alu -7 305 1 47 0 0 0 chr5 82126223 82126270 -120959262 + AT_rich Low_complexity Low_complexity 1 47 0 674 182 91 0 chr5 82126270 82126380 -120959152 - AluJb SINE Alu -188 124 5 2149 121 0 0 chr5 82126490 82126794 -120958738 - AluSq SINE Alu 0 305 2 25 0 0 0 chr5 82126794 82126819 -120958713 + AT_rich Low_complexity Low_complexity 1 25 0 893 165 0 8 chr5 82126838 82126971 -120958561 - FLAM_C SINE Alu -1 132 1 5337 197 94 45 chr5 82127416 82127855 -120957677 - L1MC4 LINE L1 0 8042 7626 2674 16 13 0 chr5 82127855 82128158 -120957374 - AluYa5 SINE Alu -4 307 1 5337 197 94 45 chr5 82128158 82128731 -120956801 - L1MC4 LINE L1 -416 7626 7082 2256 113 0 0 chr5 82128731 82129033 -120956499 - AluSq SINE Alu -11 302 1 5337 197 94 45 chr5 82129033 82129401 -120956131 - L1MC4 LINE L1 -960 7082 6578 860 211 66 83 chr5 82129401 82129471 -120956061 + MER58A DNA MER1_type 1 71 -2349 1466 184 0 45 chr5 82129471 82129759 -120955773 - AluJb SINE Alu -37 275 1 860 211 66 83 chr5 82129759 82129916 -120955616 + MER58A DNA MER1_type 71 224 0 5337 197 94 45 chr5 82129916 82130060 -120955472 - L1MC4 LINE L1 -1464 6578 6442 27 73 0 0 chr5 82130145 82130200 -120955332 + AT_rich Low_complexity Low_complexity 1 55 0 2139 133 0 0 chr5 82130590 82130892 -120954640 + AluJb SINE Alu 1 302 -10 333 389 14 0 chr5 82131567 82131706 -120953826 - MIR3 SINE MIR -10 198 58 352 217 78 60 chr5 82131805 82131971 -120953561 - L1MC5 LINE L1 -32 7929 7761 45178 33 5 0 chr5 82132085 82138212 -120947320 + L1PA3 LINE L1 1 6155 0 21 0 0 0 chr5 82138220 82138241 -120947291 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 82138267 82138290 -120947242 + AT_rich Low_complexity Low_complexity 1 23 0 959 174 101 16 chr5 82138292 82138539 -120946993 - L1MC5 LINE L1 -389 7572 7305 192 77 0 0 chr5 82139415 82139441 -120946091 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1188 123 0 0 chr5 82139444 82139599 -120945933 - AluSg/x SINE Alu -24 288 134 2228 99 16 0 chr5 82139599 82139903 -120945629 - AluY SINE Alu -2 309 1 890 230 84 0 chr5 82140319 82140545 -120944987 + MIR SINE MIR 2 246 -16 222 200 0 0 chr5 82140640 82140680 -120944852 - L2 LINE L2 -559 2755 2716 225 317 188 50 chr5 82140710 82141051 -120944481 - L2 LINE L2 -706 2608 2221 2446 94 0 0 chr5 82141503 82141810 -120943722 + AluSx SINE Alu 1 307 -5 1898 113 34 0 chr5 82142676 82142942 -120942590 + AluSx SINE Alu 1 275 -37 231 61 0 0 chr5 82142945 82142978 -120942554 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 1012 185 19 51 chr5 82143087 82143303 -120942229 - MER3 DNA MER1_type 0 209 1 663 153 120 134 chr5 82143309 82143525 -120942007 - MER58C DNA MER1_type -1 214 2 234 238 32 32 chr5 82143821 82143884 -120941648 - L2 LINE L2 0 3313 3251 247 108 0 0 chr5 82144751 82144788 -120940744 + HY5 scRNA scRNA 1 37 -47 2332 95 0 0 chr5 82145430 82145724 -120939808 + AluSg1 SINE Alu 1 294 -15 839 129 0 50 chr5 82150117 82150257 -120935275 + FLAM_C SINE Alu 1 133 0 775 85 9 0 chr5 82150867 82150973 -120934559 - U6 snRNA snRNA 0 107 1 22 0 0 0 chr5 82152226 82152248 -120933284 + AT_rich Low_complexity Low_complexity 1 22 0 236 200 31 15 chr5 82152644 82152650 -120932882 + (TA)n Simple_repeat Simple_repeat 1 5 -61 1709 179 0 21 chr5 82152650 82152940 -120932592 + AluJo SINE Alu 1 284 -28 236 200 31 15 chr5 82152940 82152998 -120932534 + (TA)n Simple_repeat Simple_repeat 5 66 0 637 234 139 33 chr5 82153259 82153503 -120932029 - L1MC4 LINE L1 -897 7145 6876 1418 150 156 29 chr5 82153523 82153863 -120931669 - L1MA7 LINE L1 0 6291 5909 1976 171 62 29 chr5 82153909 82154325 -120931207 - Tigger2a DNA MER2_type -4 430 1 640 291 102 57 chr5 82154361 82154513 -120931019 - L1MEd LINE L1 -5296 823 679 2164 124 10 0 chr5 82154513 82154820 -120930712 - AluSg SINE Alu 0 310 1 640 291 102 57 chr5 82154820 82155127 -120930405 - L1MEd LINE L1 -5440 679 343 236 204 114 34 chr5 82155210 82155298 -120930234 - L1MEd LINE L1 -5960 159 65 201 152 0 0 chr5 82155968 82156001 -120929531 + GA-rich Low_complexity Low_complexity 2 34 0 231 314 0 0 chr5 82156488 82156558 -120928974 + MLT1J LTR MaLR 150 219 -292 2251 88 3 0 chr5 82156568 82156881 -120928651 - AluSp SINE Alu 0 314 1 227 326 82 0 chr5 82157009 82157107 -120928425 + MLT1J LTR MaLR 355 460 -51 655 237 233 38 chr5 82157125 82157391 -120928141 + MER77 LTR ERV1 214 531 -74 1577 152 45 59 chr5 82157714 82158004 -120927528 - AluJb SINE Alu -3 309 24 468 0 0 0 chr5 82158696 82158748 -120926784 + (CA)n Simple_repeat Simple_repeat 2 53 0 633 302 134 49 chr5 82158920 82158977 -120926555 - L2 LINE L2 -113 3200 3149 911 143 0 0 chr5 82158977 82159110 -120926422 + FLAM_C SINE Alu 1 133 0 633 302 134 49 chr5 82159110 82159534 -120925998 - L2 LINE L2 -164 3149 2680 927 162 128 44 chr5 82159885 82160181 -120925351 + MER33 DNA MER1_type 4 324 0 365 322 191 0 chr5 82160197 82160349 -120925183 + MER5A DNA MER1_type 8 188 -1 25 0 0 0 chr5 82160447 82160472 -120925060 + AT_rich Low_complexity Low_complexity 1 25 0 184 363 53 42 chr5 82161318 82161508 -120924024 - L2 LINE L2 -212 3060 2869 780 243 199 29 chr5 82161662 82162003 -120923529 + MLT1J LTR MaLR 100 498 -13 450 214 48 10 chr5 82163582 82163685 -120921847 - L2 LINE L2 -4 3309 3203 238 255 49 20 chr5 82163847 82163949 -120921583 - L1ME3A LINE L1 -223 5947 5843 * 254 187 111 14 chr5 82163941 82164029 -120921503 - L1P3 LINE L1 -375 5787 5703 184 269 39 0 chr5 82165045 82165097 -120920435 - L2 LINE L2 -9 3304 3251 * 495 204 355 0 chr5 82165063 82165235 -120920297 - MIR SINE MIR -21 241 9 532 255 171 25 chr5 82165971 82166210 -120919322 + L2 LINE L2 3040 3313 0 529 271 173 13 chr5 82168098 82168323 -120917209 + MIR SINE MIR 2 262 0 959 177 29 49 chr5 82168393 82168443 -120917089 - L1MB2 LINE L1 -2 6169 6119 2286 95 0 7 chr5 82168443 82168738 -120916794 - AluSg SINE Alu -17 293 1 959 177 29 49 chr5 82168738 82168930 -120916602 - L1MB2 LINE L1 -52 6119 5932 * 1722 159 42 7 chr5 82168928 82169276 -120916256 - L1P5 LINE L1 -396 5760 5404 786 227 148 9 chr5 82169522 82169738 -120915794 + MIR SINE MIR 2 247 -15 1885 163 51 3 chr5 82169797 82170128 -120915404 - MER7A DNA MER2_type 0 346 2 807 265 71 9 chr5 82170454 82170790 -120914742 + L1ME3A LINE L1 5595 5951 -219 1987 131 3 22 chr5 82170831 82171143 -120914389 + AluSx SINE Alu 1 306 -6 1199 158 0 0 chr5 82171209 82171393 -120914139 - MER2 DNA MER2_type -160 185 2 191 331 121 32 chr5 82173860 82173984 -120911548 + MIR3 SINE MIR 32 166 -42 855 214 211 3 chr5 82174044 82174329 -120911203 - L1ME2 LINE L1 -10 6154 5811 2167 98 0 4 chr5 82174363 82174741 -120910791 + AluSx SINE Alu 7 383 0 1335 181 72 60 chr5 82174741 82174794 -120910738 - L1ME2 LINE L1 -574 5590 5539 1923 128 7 30 chr5 82174794 82175091 -120910441 - AluJb SINE Alu -22 290 1 1335 181 72 60 chr5 82175091 82175405 -120910127 - L1ME2 LINE L1 -625 5539 5222 385 200 19 9 chr5 82175396 82175501 -120910031 - L1MC4 LINE L1 -195 7847 7742 * 489 249 147 20 chr5 82175503 82175748 -120909784 - L1ME2 LINE L1 -913 5233 4958 607 143 0 0 chr5 82176058 82176149 -120909383 + LTR40a LTR ERVL 429 519 0 2518 160 32 71 chr5 82176479 82177067 -120908465 + L1MB2 LINE L1 5604 6168 -3 438 276 189 20 chr5 82177616 82177812 -120907720 + MIR SINE MIR 7 235 -27 180 200 0 0 chr5 82178157 82178197 -120907335 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 9009 115 50 15 chr5 82178583 82179091 -120906441 + L1PB1 LINE L1 1516 2005 -4857 2109 142 3 0 chr5 82179091 82179386 -120906146 + AluSx SINE Alu 1 296 -16 9009 115 50 15 chr5 82179386 82180609 -120904923 + L1PB1 LINE L1 2005 3327 -3535 1850 123 75 0 chr5 82180609 82180877 -120904655 + AluSx SINE Alu 1 288 -24 9009 115 50 15 chr5 82180877 82181204 -120904328 + L1PB1 LINE L1 3327 3641 -3221 3721 199 28 2 chr5 82181206 82182032 -120903500 + L1 LINE L1 3190 4036 -2110 609 107 91 0 chr5 82182064 82182177 -120903355 + L1PB1 LINE L1 6107 6229 -638 1805 71 43 0 chr5 82182182 82182436 -120903096 - L1P5 LINE L1 -363 5788 5524 2489 70 21 67 chr5 82182460 82182846 -120902686 + L1PB1 LINE L1 6499 6866 -1 21 0 0 0 chr5 82182919 82182940 -120902592 + AT_rich Low_complexity Low_complexity 1 21 0 2072 111 31 57 chr5 82183252 82183285 -120902247 + L1MB2 LINE L1 5794 5826 -345 1674 121 12 8 chr5 82183285 82183533 -120901999 + AluJo SINE Alu 61 309 -3 2072 111 31 57 chr5 82183533 82183885 -120901647 + L1MB2 LINE L1 5826 6169 -2 646 231 50 6 chr5 82186998 82187158 -120898374 + MER5A DNA MER1_type 21 187 -2 264 264 164 21 chr5 82187310 82187450 -120898082 - MER5B DNA MER1_type -18 160 1 4553 160 14 1 chr5 82188024 82188748 -120896784 - MER44D DNA MER2_type 0 605 1 1401 101 73 18 chr5 82190168 82190386 -120895146 - MER30 DNA MER1_type 0 230 1 2305 111 0 0 chr5 82190554 82190861 -120894671 - AluSx SINE Alu -5 307 1 761 285 90 28 chr5 82191024 82191378 -120894154 - L2 LINE L2 -3 3310 2935 2192 103 0 7 chr5 82191490 82191790 -120893742 + AluSq SINE Alu 1 298 -15 1903 125 6 22 chr5 82191799 82192112 -120893420 + AluJb SINE Alu 1 308 -4 357 246 145 22 chr5 82193486 82193624 -120891908 - MIR3 SINE MIR -38 170 16 1593 216 102 8 chr5 82193845 82194371 -120891161 + L1ME1 LINE L1 5515 6162 -4 23 0 0 0 chr5 82194668 82194691 -120890841 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 82195312 82195345 -120890187 + AT_rich Low_complexity Low_complexity 1 33 0 2274 116 0 7 chr5 82195824 82196127 -120889405 + AluSx SINE Alu 1 301 -11 2293 90 0 7 chr5 82196771 82197070 -120888462 + AluSq SINE Alu 1 297 -16 2417 79 0 22 chr5 82197341 82197659 -120887873 + AluY SINE Alu 1 311 0 2277 58 24 7 chr5 82197900 82198194 -120887338 - AluY SINE Alu -12 299 1 747 184 71 12 chr5 82198234 82198402 -120887130 + MER58A DNA MER1_type 45 222 -2 260 338 109 10 chr5 82198847 82199048 -120886484 + MIR SINE MIR 29 249 -13 1608 141 11 35 chr5 82199146 82199429 -120886103 + AluJb SINE Alu 21 296 -16 2070 116 0 10 chr5 82200094 82200387 -120885145 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr5 82200398 82200420 -120885112 + AT_rich Low_complexity Low_complexity 1 22 0 2168 102 3 0 chr5 82200711 82200996 -120884536 + AluSx SINE Alu 2 287 -25 1871 133 27 7 chr5 82201111 82201405 -120884127 + AluSx SINE Alu 3 302 -10 22 56 0 0 chr5 82201466 82201502 -120884030 + AT_rich Low_complexity Low_complexity 1 36 0 1775 154 10 20 chr5 82201993 82202298 -120883234 + AluSq SINE Alu 1 302 -11 21 36 0 0 chr5 82202306 82202334 -120883198 + AT_rich Low_complexity Low_complexity 1 28 0 763 77 19 10 chr5 82205083 82205187 -120880345 + U6 snRNA snRNA 1 105 -2 31 88 0 0 chr5 82209732 82209812 -120875720 + AT_rich Low_complexity Low_complexity 1 80 0 1452 113 13 18 chr5 82210082 82210311 -120875221 + AluSg/x SINE Alu 81 308 -4 210 37 0 0 chr5 82210382 82210409 -120875123 + (A)n Simple_repeat Simple_repeat 1 27 0 2585 49 0 7 chr5 82210411 82210719 -120874813 + AluY SINE Alu 1 306 -5 2260 98 3 3 chr5 82210815 82211112 -120874420 + AluSg1 SINE Alu 1 297 -12 1682 163 21 7 chr5 82211255 82211537 -120873995 + AluSx SINE Alu 1 286 -26 661 62 21 0 chr5 82211566 82211663 -120873869 + L1PB1 LINE L1 5310 5408 -743 3028 82 52 0 chr5 82211663 82212087 -120873445 + MLT2A2 LTR ERVL 1 446 -7 4903 67 25 0 chr5 82212091 82212773 -120872759 + HERVL-A2 LTR ERVL 4 702 -4952 17903 68 14 8 chr5 82212786 82214199 -120871333 + HERVL-A2 LTR ERVL 841 2274 -3380 2485 72 3 0 chr5 82214199 82214505 -120871027 + AluSp SINE Alu 1 307 -6 17903 68 14 8 chr5 82214505 82215539 -120869993 + HERVL-A2 LTR ERVL 2274 3301 -2353 17986 72 15 1 chr5 82215541 82217975 -120867557 + HERVL-A2 LTR ERVL 3188 5654 0 3277 72 15 57 chr5 82217975 82218448 -120867084 + MLT2A2 LTR ERVL 1 453 0 5085 85 22 20 chr5 82218448 82218820 -120866712 + L1PB1 LINE L1 5404 5774 -377 2331 104 0 0 chr5 82218820 82219118 -120866414 + AluSc SINE Alu 1 298 -11 5085 85 22 20 chr5 82219118 82219486 -120866046 + L1PB1 LINE L1 5774 6145 -6 2335 99 0 0 chr5 82219497 82219800 -120865732 + AluY SINE Alu 1 303 -8 1175 130 130 5 chr5 82219835 82219941 -120865591 + AluSg SINE Alu 1 92 -218 2032 58 0 4 chr5 82219941 82220198 -120865334 + AluY SINE Alu 55 310 -1 1175 130 130 5 chr5 82220198 82220299 -120865233 + AluSg SINE Alu 92 234 -76 2300 105 0 0 chr5 82220366 82220670 -120864862 + AluSq SINE Alu 1 304 -9 2216 106 3 0 chr5 82221802 82222095 -120863437 - AluY SINE Alu -17 294 1 477 180 22 108 chr5 82222154 82222293 -120863239 - MER94 DNA DNA 0 134 8 2206 117 0 0 chr5 82222561 82222868 -120862664 - AluSx SINE Alu -5 307 1 848 185 51 6 chr5 82222972 82223150 -120862382 - MER3 DNA MER1_type -12 197 12 331 206 0 0 chr5 82223190 82223253 -120862279 - MER58A DNA MER1_type -45 179 117 25 51 0 0 chr5 82223260 82223299 -120862233 + AT_rich Low_complexity Low_complexity 1 39 0 454 230 0 10 chr5 82223316 82223416 -120862116 - MER58A DNA MER1_type -4 103 5 37 39 0 0 chr5 82226149 82226200 -120859332 + AT_rich Low_complexity Low_complexity 1 51 0 224 197 0 33 chr5 82226203 82226264 -120859268 + A-rich Low_complexity Low_complexity 3 61 0 423 261 54 65 chr5 82226677 82226861 -120858671 - MIR SINE MIR -50 212 31 218 105 26 0 chr5 82226889 82226927 -120858605 + (CA)n Simple_repeat Simple_repeat 2 40 0 508 354 146 9 chr5 82227239 82227782 -120857750 + L2 LINE L2 2123 2739 -575 209 254 111 16 chr5 82227866 82227929 -120857603 + L2 LINE L2 2901 2969 -303 391 281 108 23 chr5 82229223 82229658 -120855874 + L1ME4a LINE L1 5608 6079 -42 233 167 125 28 chr5 82230737 82230809 -120854723 + L1MB4 LINE L1 3605 3683 -2463 22 35 0 0 chr5 82230828 82230857 -120854675 + AT_rich Low_complexity Low_complexity 1 29 0 1403 94 0 0 chr5 82230915 82231095 -120854437 - AluSg/x SINE Alu -6 306 127 302 220 13 60 chr5 82231168 82231318 -120854214 + L1MB4 LINE L1 4527 4669 -1477 21 36 0 0 chr5 82231367 82231395 -120854137 + AT_rich Low_complexity Low_complexity 1 28 0 368 210 118 16 chr5 82231716 82231902 -120853630 + L1MB4 LINE L1 4910 5114 -1032 551 167 0 10 chr5 82231950 82232000 -120853532 + MER3 DNA MER1_type 1 49 -160 306 96 0 123 chr5 82232000 82232073 -120853459 - MER3 DNA MER1_type -2 207 144 270 254 84 34 chr5 82232103 82232325 -120853207 + L1MB4 LINE L1 5187 5419 -743 1352 128 0 66 chr5 82232489 82232746 -120852786 - Tigger5 DNA MER2_type 0 2323 2084 1145 193 67 0 chr5 82232735 82232958 -120852574 - Tigger5 DNA MER2_type -2085 238 1 * 346 270 104 35 chr5 82232958 82233217 -120852315 + L1ME3A LINE L1 5664 5940 -230 1350 117 96 5 chr5 82233227 82233424 -120852108 + AluSg SINE Alu 1 215 -95 2811 178 38 18 chr5 82233424 82234037 -120851495 + L1MB4 LINE L1 5556 6180 0 300 243 87 22 chr5 82234435 82234620 -120850912 + L1ME1 LINE L1 2078 2274 -4122 * 1911 227 78 76 chr5 82234618 82234703 -120850829 + L1ME1 LINE L1 5257 5340 -895 2338 78 0 7 chr5 82234703 82234996 -120850536 + AluY SINE Alu 1 291 -20 1911 227 78 76 chr5 82234996 82235830 -120849702 + L1ME1 LINE L1 5340 6188 -47 2504 59 0 10 chr5 82235858 82236165 -120849367 + AluY SINE Alu 1 304 -7 995 136 71 0 chr5 82236210 82236364 -120849168 - AluJo/FRAM SINE Alu -10 302 138 1750 177 0 4 chr5 82236365 82236642 -120848890 - AluSx SINE Alu -4 308 33 301 252 130 0 chr5 82237145 82237276 -120848256 + L1ME3A LINE L1 5778 5925 -245 1966 169 0 10 chr5 82237509 82237817 -120847715 - AluJb SINE Alu -7 305 1 779 188 0 23 chr5 82237836 82237969 -120847563 - FLAM_A SINE Alu -3 130 1 1917 140 51 87 chr5 82238026 82238704 -120846828 + L1MB7 LINE L1 5300 6151 -33 2280 103 3 0 chr5 82238724 82239015 -120846517 - AluSx SINE Alu -19 293 2 2269 101 29 7 chr5 82240567 82240873 -120844659 - AluSq SINE Alu 0 313 1 3980 77 41 0 chr5 82240957 82241489 -120844043 + MER41A LTR ERV1 1 554 0 4975 204 66 13 chr5 82242358 82243716 -120841816 + L1MB7 LINE L1 3884 5313 -833 951 206 0 0 chr5 82243720 82243919 -120841613 + L1MB7 LINE L1 5960 6158 -26 396 238 132 92 chr5 82243922 82244161 -120841371 + L1ME1 LINE L1 5846 6074 -92 306 0 0 0 chr5 82244161 82244195 -120841337 + (TC)n Simple_repeat Simple_repeat 2 35 0 189 0 0 0 chr5 82244194 82244215 -120841317 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 396 238 132 92 chr5 82244195 82244278 -120841254 + L1ME1 LINE L1 6074 6160 -6 3265 161 84 56 chr5 82244298 82244327 -120841205 + L1MB7 LINE L1 5304 5331 -853 2093 118 14 0 chr5 82244327 82244623 -120840909 + AluSx SINE Alu 1 300 -12 3265 161 84 56 chr5 82244623 82245380 -120840152 + L1MB7 LINE L1 5331 6117 -67 2115 126 7 3 chr5 82245380 82245681 -120839851 - AluSx SINE Alu -10 302 1 3265 161 84 56 chr5 82245681 82245730 -120839802 + L1MB7 LINE L1 6117 6163 -21 1251 285 114 26 chr5 82245812 82246571 -120838961 + L2 LINE L2 2371 3218 -95 365 246 130 36 chr5 82246998 82247136 -120838396 - MLT1J1 LTR MaLR -3 443 293 429 231 183 41 chr5 82247136 82247576 -120837956 - MLT1H1 LTR MaLR 0 549 20 200 334 151 27 chr5 82248033 82248629 -120836903 + L2 LINE L2 2183 2852 -462 2256 221 125 127 chr5 82249986 82250084 -120835448 - HAL1 LINE L1 -2 2505 2408 375 60 0 0 chr5 82250084 82250134 -120835398 + (CA)n Simple_repeat Simple_repeat 2 51 0 2256 221 125 127 chr5 82250134 82250679 -120834853 - HAL1 LINE L1 -99 2408 1864 829 165 122 0 chr5 82250679 82250843 -120834689 + MER3 DNA MER1_type 7 190 -19 2256 221 125 127 chr5 82250843 82251886 -120833646 - HAL1 LINE L1 -643 1864 658 410 170 129 27 chr5 82251886 82252033 -120833499 - Charlie2 DNA MER1_type -13 2849 2688 2342 223 32 7 chr5 82252037 82252606 -120832926 - L1MC4a LINE L1 -11 7797 7215 1998 204 127 40 chr5 82252621 82253055 -120832477 - Charlie2 DNA MER1_type -161 2701 2306 2028 128 17 10 chr5 82253055 82253351 -120832181 - AluSq SINE Alu -15 298 1 1998 204 127 40 chr5 82253351 82253690 -120831842 - Charlie2 DNA MER1_type -556 2306 1861 250 214 0 0 chr5 82253781 82253837 -120831695 - Charlie2 DNA MER1_type -2529 253 198 599 273 143 13 chr5 82253963 82254271 -120831261 - HAL1 LINE L1 -2152 355 8 839 143 0 0 chr5 82254931 82255050 -120830482 + AluJb SINE Alu 171 289 -23 2079 122 3 10 chr5 82255080 82255374 -120830158 + AluSx SINE Alu 4 295 -17 213 311 112 81 chr5 82256499 82256660 -120828872 - MIR3 SINE MIR -1 207 42 1256 186 4 8 chr5 82256853 82257090 -120828442 - MER46A DNA MER2_type 0 236 1 236 188 20 20 chr5 82257969 82258070 -120827462 + (TA)n Simple_repeat Simple_repeat 1 101 0 21 0 0 0 chr5 82260381 82260402 -120825130 + AT_rich Low_complexity Low_complexity 1 21 0 1949 150 13 10 chr5 82260706 82261012 -120824520 + AluJb SINE Alu 1 307 -5 684 283 271 28 chr5 82261173 82261856 -120823676 - L3 LINE CR1 -144 1433 585 2124 102 20 7 chr5 82262051 82262344 -120823188 + AluSx SINE Alu 1 297 -15 2241 106 13 0 chr5 82263221 82263523 -120822009 + AluSp SINE Alu 1 306 -7 1394 149 84 84 chr5 82264611 82264901 -120820631 + THE1C LTR MaLR 1 293 -82 2372 104 3 7 chr5 82264901 82265209 -120820323 - AluSq SINE Alu -6 307 1 1394 149 84 84 chr5 82265209 82265286 -120820246 + THE1C LTR MaLR 292 368 -7 21 0 0 0 chr5 82265654 82265675 -120819857 + AT_rich Low_complexity Low_complexity 1 21 0 2385 82 0 3 chr5 82265932 82266235 -120819297 + AluY SINE Alu 1 302 -9 308 256 94 60 chr5 82266348 82266465 -120819067 - MIR3 SINE MIR -3 205 85 21 0 0 0 chr5 82266604 82266625 -120818907 + AT_rich Low_complexity Low_complexity 1 21 0 206 239 0 0 chr5 82267338 82267384 -120818148 + (CATATA)n Simple_repeat Simple_repeat 4 49 0 343 169 10 194 chr5 82267407 82267528 -120818004 + L1MB7 LINE L1 6008 6079 -105 2337 101 0 3 chr5 82267528 82267836 -120817696 + AluSg SINE Alu 4 310 0 343 169 10 194 chr5 82267836 82267915 -120817617 + L1MB7 LINE L1 6079 6171 -13 842 235 0 6 chr5 82267915 82268081 -120817451 - FRAM SINE Alu 0 166 2 317 247 124 98 chr5 82268131 82268895 -120816637 + L1M4 LINE L1 4037 4820 -1326 561 249 226 15 chr5 82269011 82269272 -120816260 - L1ME3 LINE L1 -210 5952 5637 264 162 182 88 chr5 82269360 82269508 -120816024 + L1MC5 LINE L1 7370 7531 -430 1778 156 36 19 chr5 82269560 82269867 -120815665 + AluJo SINE Alu 1 312 0 24 0 0 0 chr5 82269893 82269917 -120815615 + AT_rich Low_complexity Low_complexity 1 24 0 2202 116 7 0 chr5 82269923 82270226 -120815306 + AluY SINE Alu 1 305 -6 2341 107 0 0 chr5 82270623 82270932 -120814600 + AluY SINE Alu 2 310 -1 984 197 27 27 chr5 82272062 82272250 -120813282 - AluJo SINE Alu -124 188 1 258 146 0 0 chr5 82272362 82272410 -120813122 + MER113 DNA MER1_type? 1 48 -473 1773 138 57 3 chr5 82272517 82272851 -120812681 - L1MB4 LINE L1 -6 6174 5823 298 323 69 0 chr5 82273663 82273793 -120811739 - MIR SINE MIR -82 180 42 29 0 0 0 chr5 82273801 82273830 -120811702 + AT_rich Low_complexity Low_complexity 1 29 0 641 278 12 12 chr5 82273926 82274095 -120811437 + MIR3 SINE MIR 19 187 -21 874 280 9 5 chr5 82275453 82275667 -120809865 - MIR SINE MIR -28 234 20 271 253 253 0 chr5 82275922 82276005 -120809527 + MIR SINE MIR 4 107 -155 1082 185 5 0 chr5 82276292 82276476 -120809056 - AluJo SINE Alu -2 310 126 751 288 56 5 chr5 82278677 82278892 -120806640 - MIR SINE MIR -6 256 31 1347 67 0 17 chr5 82279087 82279267 -120806265 - AluY SINE Alu -6 305 129 6244 134 13 17 chr5 82279372 82279482 -120806050 - L1MA3 LINE L1 0 6305 6196 2102 136 0 3 chr5 82279482 82279792 -120805740 + AluSx SINE Alu 1 309 0 6244 134 13 17 chr5 82279792 82280553 -120804979 - L1MA3 LINE L1 -109 6196 5433 1919 156 3 16 chr5 82280553 82280868 -120804664 - AluJb SINE Alu -1 311 1 6244 134 13 17 chr5 82280868 82281903 -120803629 - L1MA3 LINE L1 -872 5433 4403 559 288 34 105 chr5 82282083 82282198 -120803334 + L3 LINE CR1 1001 1123 -454 2378 89 0 0 chr5 82282198 82282501 -120803031 + AluY SINE Alu 1 303 -8 559 288 34 105 chr5 82282501 82282639 -120802893 + L3 LINE CR1 1123 1225 -352 1710 141 9 75 chr5 82282639 82282973 -120802559 + AluJb SINE Alu 1 312 0 559 288 34 105 chr5 82282973 82283069 -120802463 + L3 LINE CR1 1225 1326 -251 2065 144 8 26 chr5 82283437 82283476 -120802056 + L1PA15 LINE L1 5788 5826 -339 2242 117 0 7 chr5 82283476 82283783 -120801749 + AluSg SINE Alu 1 305 -5 2065 144 8 26 chr5 82283783 82284126 -120801406 + L1PA15 LINE L1 5826 6163 -2 2070 145 3 3 chr5 82284302 82284605 -120800927 + AluSx SINE Alu 1 303 -9 2449 88 0 3 chr5 82284651 82284958 -120800574 - AluSg SINE Alu -3 307 2 778 165 0 15 chr5 82285108 82285241 -120800291 + FLAM_C SINE Alu 2 132 -1 510 271 32 26 chr5 82285385 82285540 -120799992 - MIR SINE MIR -61 201 46 277 321 32 37 chr5 82285775 82285965 -120799567 + L2 LINE L2 1851 2039 -1275 * 348 307 8 31 chr5 82285952 82286079 -120799453 - L2 LINE L2 -1035 2279 2156 207 0 0 0 chr5 82286199 82286222 -120799310 + (A)n Simple_repeat Simple_repeat 1 23 0 1986 138 3 3 chr5 82286227 82286518 -120799014 + AluSg SINE Alu 1 291 -19 284 298 72 61 chr5 82286640 82286821 -120798711 + L2 LINE L2 2168 2350 -964 1321 152 45 0 chr5 82286840 82287038 -120798494 + AluSq SINE Alu 29 235 -78 208 324 139 46 chr5 82287226 82287399 -120798133 - MIR SINE MIR -54 208 20 276 323 79 82 chr5 82287697 82287988 -120797544 + L2 LINE L2 2868 3157 -115 189 162 108 0 chr5 82288287 82288324 -120797208 + L2 LINE L2 3231 3271 -1 306 310 69 0 chr5 82288797 82288913 -120796619 - L3 LINE CR1 -2 1575 1452 2043 102 4 4 chr5 82289620 82289895 -120795637 - AluSg SINE Alu -35 275 1 1706 42 0 0 chr5 82293165 82293356 -120792176 + L1PA5 LINE L1 5963 6153 -1 225 0 0 0 chr5 82293356 82293381 -120792151 + (TA)n Simple_repeat Simple_repeat 1 25 0 397 301 64 39 chr5 82293410 82293566 -120791966 - MER91A DNA MER1_type -33 163 4 2751 193 70 36 chr5 82293777 82294397 -120791135 + MER67B LTR ERV1 1 645 -16 2317 98 3 3 chr5 82294397 82294703 -120790829 - AluSq SINE Alu -7 306 1 2751 193 70 36 chr5 82294703 82294721 -120790811 + MER67B LTR ERV1 645 661 0 3835 207 43 6 chr5 82294956 82295051 -120790481 - L1M4 LINE L1 -2905 3241 3151 2578 52 0 3 chr5 82295051 82295357 -120790175 - AluY SINE Alu -6 305 1 3835 207 43 6 chr5 82295357 82296206 -120789326 - L1M4 LINE L1 -2995 3151 2262 539 289 26 4 chr5 82296209 82296479 -120789053 - L1M4 LINE L1 -746 5400 5125 11612 99 7 1 chr5 82296940 82298525 -120787007 - L1P3 LINE L1 -4863 1598 5 256 164 73 18 chr5 82298531 82298586 -120786946 + L1MB7 LINE L1 6127 6184 0 3618 213 110 11 chr5 82298887 82299445 -120786087 + L1MB8 LINE L1 3260 3761 -2385 1846 108 63 0 chr5 82299445 82299740 -120785792 + AluSx SINE Alu 1 312 0 3618 213 110 11 chr5 82299740 82300113 -120785419 + L1MB8 LINE L1 3761 4285 -1861 1383 140 0 18 chr5 82300492 82300720 -120784812 - AluJb SINE Alu -1 311 88 796 316 113 28 chr5 82301798 82302330 -120783202 + L2 LINE L2 2027 2603 -711 2547 117 5 40 chr5 82302382 82302759 -120782773 + THE1B LTR MaLR 1 364 0 187 254 73 18 chr5 82302961 82303016 -120782516 + L2 LINE L2 3215 3272 0 550 305 40 0 chr5 82303139 82303313 -120782219 + MIR SINE MIR 70 250 -12 1873 115 41 0 chr5 82303525 82303795 -120781737 - AluSx SINE Alu -13 299 19 2067 138 3 3 chr5 82304390 82304695 -120780837 - AluSx SINE Alu -7 305 1 542 175 24 16 chr5 82304695 82304821 -120780711 + L1MB8 LINE L1 5268 5394 -752 999 159 53 0 chr5 82304821 82304991 -120780541 + AluSg/x SINE Alu 134 312 0 3376 187 25 42 chr5 82304993 82305227 -120780305 + L1MB8 LINE L1 5385 5621 -557 2242 205 119 10 chr5 82305227 82305730 -120779802 + MER74A LTR ERVL 1 558 0 3376 187 25 42 chr5 82305730 82306261 -120779271 + L1MB8 LINE L1 5621 6137 -41 915 83 14 76 chr5 82306277 82306387 -120779145 - L1PA7 LINE L1 0 6154 6054 2244 103 3 3 chr5 82306387 82306679 -120778853 - AluSg SINE Alu -18 292 1 915 83 14 76 chr5 82306679 82306713 -120778819 - L1PA7 LINE L1 -100 6054 6019 1934 151 3 0 chr5 82306877 82307161 -120778371 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr5 82307161 82307187 -120778345 + AT_rich Low_complexity Low_complexity 1 26 0 460 249 171 44 chr5 82307745 82307876 -120777656 + HAL1 LINE L1 882 995 -1512 2199 106 0 0 chr5 82307876 82308169 -120777363 + AluSx SINE Alu 11 303 -9 460 249 171 44 chr5 82308169 82308294 -120777238 + HAL1 LINE L1 995 1103 -1404 2232 119 0 0 chr5 82308294 82308597 -120776935 + AluSx SINE Alu 1 303 -9 460 249 171 44 chr5 82308597 82308772 -120776760 + HAL1 LINE L1 1103 1369 -1138 405 219 65 8 chr5 82308927 82309050 -120776482 + L1MC5 LINE L1 7800 7929 -32 279 0 0 0 chr5 82309076 82309107 -120776425 + (T)n Simple_repeat Simple_repeat 1 31 0 859 135 14 14 chr5 82309310 82309451 -120776081 - AluSq/x SINE Alu -171 142 2 1609 156 3 24 chr5 82309455 82309764 -120775768 - AluJo SINE Alu 0 303 1 184 262 24 0 chr5 82309776 82309818 -120775714 - MER5B DNA MER1_type -126 52 10 21 0 0 0 chr5 82310122 82310143 -120775389 + AT_rich Low_complexity Low_complexity 1 21 0 2207 78 14 0 chr5 82310148 82310459 -120775073 + AluSp SINE Alu 1 315 0 2205 92 0 3 chr5 82310490 82310772 -120774760 + AluSx SINE Alu 14 294 -18 328 167 0 0 chr5 82310776 82310830 -120774702 + Alu SINE Alu 243 296 -5 547 307 63 1 chr5 82310969 82311231 -120774301 + L1ME LINE L1 5316 5592 -578 180 0 0 0 chr5 82311265 82311285 -120774247 + (A)n Simple_repeat Simple_repeat 1 20 0 1041 108 0 0 chr5 82311305 82311435 -120774097 + AluSq/x SINE Alu 1 130 -183 646 154 9 0 chr5 82311435 82311545 -120773987 + HERVH LTR ERV1 5906 6016 -1697 * 3689 106 12 28 chr5 82311538 82312104 -120773428 + HERVH LTR ERV1 7157 7713 0 2103 85 50 11 chr5 82312104 82312491 -120773041 + LTR7 LTR ERV1 1 450 0 1100 192 62 39 chr5 82312667 82312927 -120772605 + AluJo SINE Alu 1 266 -46 2500 48 3 3 chr5 82312956 82313250 -120772282 - AluY SINE Alu -17 294 1 1256 137 99 11 chr5 82313580 82313843 -120771689 - AluJb SINE Alu -16 286 1 560 273 109 13 chr5 82314315 82314553 -120770979 - MIR SINE MIR 0 262 2 3753 98 12 8 chr5 82314954 82315463 -120770069 + MER9 LTR ERVK 1 511 0 2195 99 0 3 chr5 82315518 82315801 -120769731 - AluSg SINE Alu -17 293 12 414 262 67 83 chr5 82316290 82316752 -120768780 + MLT1J LTR MaLR 3 528 -87 2362 107 0 0 chr5 82316866 82317175 -120768357 + AluSx SINE Alu 1 309 -3 1708 140 16 0 chr5 82317175 82317432 -120768100 + L1PA16 LINE L1 5905 6165 -1 2331 95 3 3 chr5 82317508 82317813 -120767719 - AluSp SINE Alu -8 305 1 1319 197 15 34 chr5 82318316 82318585 -120766947 - AluJo SINE Alu -19 293 30 2301 154 35 0 chr5 82319361 82319730 -120765802 - MSTA LTR MaLR 0 428 47 253 132 0 0 chr5 82319732 82319770 -120765762 - MSTA LTR MaLR -346 82 45 2211 104 31 0 chr5 82319770 82320057 -120765475 - AluSx SINE Alu -16 296 1 225 0 0 0 chr5 82320072 82320097 -120765435 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1192 75 0 0 chr5 82320109 82320255 -120765277 - L1PA3 LINE L1 -10 6145 6000 957 247 119 35 chr5 82320299 82320676 -120764856 - MLT1I LTR MaLR 0 409 1 300 254 15 0 chr5 82320689 82320756 -120764776 - LTR16C LTR ERVL -17 474 407 28257 80 6 17 chr5 82320862 82321696 -120763836 - L1PA7 LINE L1 -279 5875 5033 2462 55 0 29 chr5 82321696 82322007 -120763525 - AluSp SINE Alu -11 302 1 28257 80 6 17 chr5 82322007 82322305 -120763227 - L1PA7 LINE L1 -1121 5033 4733 2543 62 0 3 chr5 82322305 82322609 -120762923 - AluY SINE Alu -8 303 1 28257 80 6 17 chr5 82322609 82324149 -120761383 - L1PA7 LINE L1 -1421 4733 3177 3880 106 6 4 chr5 82324149 82324658 -120760874 - MER9 LTR ERVK 0 511 2 28257 80 6 17 chr5 82324658 82326429 -120759103 - L1PA7 LINE L1 -2977 3177 1483 1306 147 11 112 chr5 82326529 82326814 -120758718 - AluJb SINE Alu -56 256 1 305 304 16 16 chr5 82327331 82327456 -120758076 + L2 LINE L2 2898 3022 -250 511 290 44 75 chr5 82327833 82327987 -120757545 - L1ME3A LINE L1 -345 5825 5668 2098 130 7 0 chr5 82327987 82328279 -120757253 - AluSq SINE Alu -19 294 1 821 177 0 88 chr5 82328289 82328470 -120757062 - FRAM SINE Alu -1 165 1 511 290 44 75 chr5 82328470 82328625 -120756907 - L1ME3A LINE L1 -511 5659 5515 205 83 0 28 chr5 82328811 82328847 -120756685 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 484 269 82 25 chr5 82328850 82329095 -120756437 - L1P5 LINE L1 -628 5528 5270 360 0 0 0 chr5 82329130 82329170 -120756362 + (TG)n Simple_repeat Simple_repeat 2 41 0 227 230 193 30 chr5 82329218 82329353 -120756179 + MIR SINE MIR 106 262 0 25 75 0 0 chr5 82329373 82329426 -120756106 + AT_rich Low_complexity Low_complexity 1 53 0 2285 112 0 3 chr5 82329513 82329816 -120755716 - AluSq SINE Alu -11 302 1 2013 110 35 7 chr5 82330043 82330325 -120755207 - AluSx SINE Alu -22 290 1 243 0 0 0 chr5 82330340 82330367 -120755165 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1350 46 0 0 chr5 82330370 82330523 -120755009 - L1PA3 LINE L1 -3 6152 6000 991 244 119 35 chr5 82330567 82330944 -120754588 - MLT1I LTR MaLR 0 409 1 756 307 54 3 chr5 82330957 82331270 -120754262 - LTR16C LTR ERVL -17 474 146 535 204 14 3 chr5 82331638 82331759 -120753773 - MIR SINE MIR -56 152 30 1630 115 8 0 chr5 82332630 82332864 -120752668 + AluSc SINE Alu 74 309 0 204 67 0 0 chr5 82332917 82332947 -120752585 + (A)n Simple_repeat Simple_repeat 1 30 0 778 256 162 45 chr5 82332958 82333660 -120751872 - HAL1 LINE L1 -151 2356 1473 2645 48 0 0 chr5 82333705 82334015 -120751517 + AluY SINE Alu 2 311 0 333 389 14 0 chr5 82334071 82334210 -120751322 - MIR3 SINE MIR -10 198 58 406 204 208 61 chr5 82334309 82334588 -120750944 - L1MC5 LINE L1 -32 7929 7610 970 34 62 0 chr5 82334589 82334735 -120750797 + L1P LINE L1 1 155 -5991 469 269 122 20 chr5 82334840 82335037 -120750495 - MLT1H LTR MaLR -316 233 17 1596 264 88 58 chr5 82335320 82335483 -120750049 + MLT1E LTR MaLR 3 160 -433 623 48 12 0 chr5 82335483 82335566 -120749966 + (TTATG)n Simple_repeat Simple_repeat 2 85 0 1596 264 88 58 chr5 82335566 82335973 -120749559 + MLT1E LTR MaLR 160 590 -3 2206 91 10 0 chr5 82335977 82336274 -120749258 - AluY SINE Alu -11 300 1 749 143 16 24 chr5 82336274 82336384 -120749148 - AluSq SINE Alu -68 245 135 2346 47 0 33 chr5 82336384 82336684 -120748848 - AluY SINE Alu -21 290 1 749 143 16 24 chr5 82336684 82336699 -120748833 - AluSq SINE Alu -178 135 121 1446 113 13 18 chr5 82336782 82337011 -120748521 - AluSg/x SINE Alu -4 306 79 31 88 0 0 chr5 82337281 82337361 -120748171 + AT_rich Low_complexity Low_complexity 1 80 0 24144 36 4 0 chr5 82540297 82543427 -120542105 - L1P LINE L1 -904 5242 2102 12988 43 4 45 chr5 82543553 82545690 -120539842 - L1P LINE L1 -2443 3703 1654 414 317 82 34 chr5 82545896 82546189 -120539343 - L1M4 LINE L1 -1224 4922 4616 636 117 0 0 chr5 82546202 82546296 -120539236 - AluSg/x SINE Alu -8 302 209 331 309 65 16 chr5 82546871 82546994 -120538538 + L1ME LINE L1 322 450 -5620 24 0 0 0 chr5 82547736 82547760 -120537772 + AT_rich Low_complexity Low_complexity 1 24 0 518 223 69 0 chr5 82548397 82548572 -120536960 - L1MC5 LINE L1 -852 7109 6923 1655 171 17 13 chr5 82548917 82549216 -120536316 + AluJo SINE Alu 1 300 -12 338 216 0 31 chr5 82549429 82549526 -120536006 - FLAM_A SINE Alu -36 97 4 2246 225 68 56 chr5 82549682 82550536 -120534996 - MER6 DNA MER2_type 0 865 2 23 0 0 0 chr5 82551021 82551044 -120534488 + AT_rich Low_complexity Low_complexity 1 23 0 2185 96 3 3 chr5 82551171 82551463 -120534069 - AluSp SINE Alu -21 292 1 1711 131 78 11 chr5 82551892 82552175 -120533357 + AluJo SINE Alu 5 306 -6 2021 130 0 7 chr5 82552427 82552750 -120532782 - AluSq SINE Alu 0 321 1 3342 160 19 68 chr5 82552914 82553640 -120531892 - LTR8 LTR ERV1 0 691 1 598 271 18 78 chr5 82554433 82554659 -120530873 + L1ME LINE L1 5388 5595 -526 2145 129 7 0 chr5 82554659 82554953 -120530579 + AluSx SINE Alu 1 296 -16 598 271 18 78 chr5 82554953 82555007 -120530525 + L1ME LINE L1 5595 5651 -470 242 122 0 0 chr5 82555469 82555510 -120530022 - L1ME1 LINE L1 0 6166 6126 * 310 175 0 0 chr5 82555477 82555540 -120529992 - L1ME2 LINE L1 -9 6155 6093 237 33 0 0 chr5 82555951 82555981 -120529551 + (CA)n Simple_repeat Simple_repeat 2 31 0 2434 215 39 20 chr5 82556071 82556790 -120528742 - L1ME2 LINE L1 -235 5929 5193 1666 167 13 49 chr5 82556790 82557095 -120528437 - AluJb SINE Alu -18 294 1 2434 215 39 20 chr5 82557095 82557182 -120528350 - L1ME2 LINE L1 -971 5193 5109 1776 194 19 51 chr5 82557183 82557252 -120528280 - MLT1C LTR MaLR -1 466 396 2123 121 3 16 chr5 82557252 82557558 -120527974 - AluSc SINE Alu -6 303 2 1776 194 19 51 chr5 82557558 82557900 -120527632 - MLT1C LTR MaLR -71 396 68 2356 90 3 0 chr5 82557900 82558201 -120527331 - AluSp SINE Alu -11 302 1 2188 120 0 16 chr5 82558201 82558509 -120527023 - AluSx SINE Alu -8 304 1 596 246 31 36 chr5 82558578 82558802 -120526730 - L1ME2 LINE L1 -1033 5113 4891 29424 76 9 125 chr5 82558812 82560949 -120524583 + L1PA5 LINE L1 12 2397 -3757 6512 43 68 0 chr5 82560949 82561774 -120523758 - L1PA4 LINE L1 -3 6152 5325 29424 76 9 125 chr5 82561774 82566609 -120518923 + L1PA5 LINE L1 2397 6151 -3 27 0 0 0 chr5 82566617 82566644 -120518888 + AT_rich Low_complexity Low_complexity 1 27 0 183 80 0 0 chr5 82567437 82567462 -120518070 + (A)n Simple_repeat Simple_repeat 1 25 0 214 260 13 26 chr5 82567893 82567970 -120517562 + GA-rich Low_complexity Low_complexity 2 77 0 492 294 43 95 chr5 82568982 82569424 -120516108 + HAL1 LINE L1 45 463 -2044 1200 141 5 0 chr5 82569472 82569656 -120515876 + AluSq SINE Alu 115 299 -14 893 90 8 0 chr5 82569656 82569789 -120515743 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 315 298 36 12 chr5 82569852 82569936 -120515596 + MER5A DNA MER1_type 12 97 -92 1574 256 98 16 chr5 82569937 82570429 -120515103 + MLT1E LTR MaLR 3 534 -59 634 132 0 47 chr5 82570434 82570540 -120514992 + MER5A DNA MER1_type 89 189 0 618 181 134 0 chr5 82570915 82571042 -120514490 + AluJo SINE Alu 1 144 -168 957 191 33 23 chr5 82571069 82571284 -120514248 + AluJo SINE Alu 85 301 -11 449 209 52 46 chr5 82571509 82571662 -120513870 - HAL1 LINE L1 -965 1542 1389 270 241 74 0 chr5 82571768 82571876 -120513656 - HAL1 LINE L1 -1287 1220 1105 385 241 48 106 chr5 82571987 82572298 -120513234 - HAL1 LINE L1 -1549 958 666 1337 234 117 37 chr5 82572384 82572846 -120512686 - MLT1D LTR MaLR -6 499 1 6808 52 17 11 chr5 82573943 82575217 -120510315 + L1PA7 LINE L1 4878 6154 0 23 0 0 0 chr5 82578450 82578473 -120507059 + AT_rich Low_complexity Low_complexity 1 23 0 591 281 51 25 chr5 82579031 82579266 -120506266 + MIR SINE MIR 22 262 0 380 259 81 96 chr5 82579522 82579719 -120505813 - MIR SINE MIR -19 243 50 2527 102 33 3 chr5 82580777 82581141 -120504391 + THE1C LTR MaLR 1 375 0 189 0 0 0 chr5 82581444 82581465 -120504067 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 594 244 92 65 chr5 82582103 82582320 -120503212 - L2 LINE L2 -4 3309 3087 1743 211 124 27 chr5 82582385 82582859 -120502673 + MLT1F1 LTR MaLR 48 567 0 599 294 27 15 chr5 82582869 82583135 -120502397 - L2 LINE L2 -229 3084 2723 24 53 0 0 chr5 82583579 82583617 -120501915 + AT_rich Low_complexity Low_complexity 1 38 0 279 244 0 0 chr5 82584027 82584150 -120501382 + GA-rich Low_complexity Low_complexity 1 123 0 180 366 24 0 chr5 82584471 82584553 -120500979 + L2 LINE L2 3108 3191 -81 200 108 0 27 chr5 82584730 82584767 -120500765 + (TATG)n Simple_repeat Simple_repeat 2 37 0 574 249 37 55 chr5 82584773 82584990 -120500542 - L1MC4a LINE L1 -1878 5930 5718 2094 131 10 0 chr5 82585382 82585673 -120499859 - AluSx SINE Alu -18 294 1 1436 232 77 59 chr5 82585936 82586431 -120499101 + MLT1D LTR MaLR 2 505 0 2970 195 71 75 chr5 82586431 82587309 -120498223 + MLT1D-int LTR MaLR 1 874 -497 430 237 16 79 chr5 82587388 82587578 -120497954 + L1M4b LINE L1 1036 1213 -5646 2315 219 61 37 chr5 82587836 82587965 -120497567 + L1M4b LINE L1 1223 1348 -5790 1611 174 10 53 chr5 82587965 82588264 -120497268 + AluJo SINE Alu 1 286 -26 2315 219 61 37 chr5 82588264 82589421 -120496111 + L1M4b LINE L1 1348 2687 -4451 642 259 90 31 chr5 82589626 82590139 -120495393 + L1M4b LINE L1 2642 3104 -3853 1869 139 41 46 chr5 82590139 82590505 -120495027 + THE1B LTR MaLR 1 364 0 10178 87 0 5 chr5 82590505 82592091 -120493441 + THE1B-int LTR MaLR 1 1580 0 642 259 90 31 chr5 82590505 82590548 -120494984 + L1M4b LINE L1 3104 3143 -3814 * 875 121 8 15 chr5 82592093 82592225 -120493307 + THE1B LTR MaLR 3 133 -242 509 250 92 0 chr5 82592230 82592382 -120493150 - L1MC4a LINE L1 -1084 6724 6559 380 151 137 0 chr5 82592637 82592710 -120492822 - Tigger4(Zombi) DNA MER2_type 0 2731 2649 2446 159 65 2 chr5 82592711 82593127 -120492405 - Tigger4(Zombi) DNA MER2_type -2289 442 1 2450 204 94 8 chr5 82593359 82593879 -120491653 + MLT1F1 LTR MaLR 3 567 0 426 158 0 12 chr5 82594644 82594726 -120490806 + Tigger4(Zombi) DNA MER2_type 2651 2731 0 533 295 100 32 chr5 82594727 82595127 -120490405 + L1MC4a LINE L1 6298 6724 -1084 837 246 55 42 chr5 82595129 82595563 -120489969 + L1MC5 LINE L1 7343 7782 -179 1908 160 0 6 chr5 82595656 82595968 -120489564 + AluSx SINE Alu 1 310 -2 599 322 59 27 chr5 82595997 82596370 -120489162 - L3 LINE CR1 -1010 567 183 1240 172 54 24 chr5 82596374 82596670 -120488862 - L1MB8 LINE L1 0 6178 5874 208 116 0 47 chr5 82597548 82597591 -120487941 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 661 195 13 63 chr5 82599295 82599454 -120486078 - MER20 DNA MER1_type -68 151 1 3261 237 77 77 chr5 82599498 82599971 -120485561 + L1MEc LINE L1 1768 2240 -3975 1245 142 0 0 chr5 82599971 82600175 -120485357 - L1PA16 LINE L1 -3 6163 5960 3261 237 77 77 chr5 82600175 82601874 -120483658 + L1MEc LINE L1 2240 4049 -2166 16317 66 7 2 chr5 82601874 82604857 -120480675 + L1PA6 LINE L1 3157 6151 -3 3261 237 77 77 chr5 82604857 82604934 -120480598 + L1MEc LINE L1 4049 4125 -2090 446 221 9 9 chr5 82604929 82605042 -120480490 + L1ME2 LINE L1 5926 6038 -126 * 267 227 30 0 chr5 82605043 82605109 -120480423 + L1ME2 LINE L1 6086 6153 -11 324 48 0 0 chr5 82605113 82605155 -120480377 + (CA)n Simple_repeat Simple_repeat 2 43 0 43640 46 1 1 chr5 82605213 82610920 -120474612 + L1P2 LINE L1 2 5714 -441 1035 130 35 13 chr5 82611020 82611298 -120474234 - pTR5 LTR ERV1 -501 213 1 858 246 31 42 chr5 82611484 82611773 -120473759 - pTR5 LTR ERV1 -1410 1028 743 39956 52 2 3 chr5 82611773 82617624 -120467908 + L1PA4 LINE L1 312 6155 0 29 0 0 0 chr5 82617653 82617682 -120467850 + AT_rich Low_complexity Low_complexity 1 29 0 275 206 10 69 chr5 82617723 82617825 -120467707 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 2211 114 0 0 chr5 82618158 82618456 -120467076 + AluSq SINE Alu 1 298 -15 8252 152 37 30 chr5 82618694 82621004 -120464528 + L1MA6 LINE L1 3703 6037 -263 2096 116 0 0 chr5 82621004 82621279 -120464253 + AluSc SINE Alu 6 280 -29 8252 152 37 30 chr5 82621279 82621528 -120464004 + L1MA6 LINE L1 6037 6283 -17 25 65 0 0 chr5 82621539 82621585 -120463947 + AT_rich Low_complexity Low_complexity 1 46 0 288 0 0 0 chr5 82622744 82622776 -120462756 + (TG)n Simple_repeat Simple_repeat 2 33 0 351 0 0 0 chr5 82622832 82622871 -120462661 + (TG)n Simple_repeat Simple_repeat 2 40 0 23 54 0 0 chr5 82624729 82624766 -120460766 + AT_rich Low_complexity Low_complexity 1 37 0 1864 220 62 30 chr5 82625406 82625727 -120459805 - L1M4 LINE L1 -2068 4078 3732 1816 155 0 63 chr5 82625727 82626044 -120459488 - AluJb SINE Alu -15 297 1 1864 220 62 30 chr5 82626044 82626250 -120459282 - L1M4 LINE L1 -2414 3732 3534 268 181 51 0 chr5 82626251 82626323 -120459209 + MLT1B LTR MaLR 1 80 -294 31 26 0 0 chr5 82626420 82626458 -120459074 + AT_rich Low_complexity Low_complexity 1 38 0 394 257 10 0 chr5 82626459 82626560 -120458972 - L1MA10 LINE L1 -30 6304 6203 333 314 93 47 chr5 82626800 82627207 -120458325 - L1M4 LINE L1 -1049 5097 4672 232 318 64 0 chr5 82627327 82627547 -120457985 - L1M4 LINE L1 -1543 4603 4370 804 216 87 28 chr5 82627615 82627945 -120457587 - L1MD3 LINE L1 0 8042 7703 513 314 12 29 chr5 82628176 82628348 -120457184 + MIR3 SINE MIR 18 186 -22 645 288 49 44 chr5 82630275 82630706 -120454826 + L1ME4a LINE L1 5689 6121 0 2110 137 0 3 chr5 82632612 82632925 -120452607 - AluSx SINE Alu 0 312 1 277 155 35 0 chr5 82633065 82633123 -120452409 + MARNA DNA Mariner 283 342 -244 2555 179 43 8 chr5 82633585 82634092 -120451440 + LTR45 LTR ERV1 1 525 0 336 239 239 0 chr5 82634169 82634282 -120451250 + MER103 DNA DNA 20 159 -7 205 238 0 0 chr5 82634482 82634524 -120451008 - L2 LINE L2 -12 3260 3219 985 210 0 34 chr5 82634727 82634932 -120450600 + AluJo SINE Alu 86 283 -29 29 60 0 0 chr5 82635512 82635562 -120449970 + AT_rich Low_complexity Low_complexity 1 50 0 2297 119 3 0 chr5 82636010 82636321 -120449211 - AluSx SINE Alu 0 312 1 375 138 18 13 chr5 82636354 82636423 -120449109 + Alu SINE Alu 1 55 -247 1531 102 4 32 chr5 82637110 82637356 -120448176 + AluSg/x SINE Alu 67 305 -5 3095 117 26 63 chr5 82638051 82638672 -120446860 + MER4B LTR ERV1 9 778 -1 21 36 0 0 chr5 82638703 82638731 -120446801 + AT_rich Low_complexity Low_complexity 1 28 0 927 198 0 6 chr5 82639363 82639530 -120446002 - FRAM SINE Alu 0 166 1 2260 109 3 0 chr5 82639801 82640112 -120445420 + AluSx SINE Alu 1 312 0 1402 159 89 11 chr5 82641314 82641585 -120443947 - AluJo SINE Alu -20 292 1 342 264 87 43 chr5 82641653 82641931 -120443601 - L1MC4 LINE L1 -965 7077 6807 249 293 73 12 chr5 82641920 82642002 -120443530 + L2 LINE L2 3226 3312 -1 * 687 175 0 70 chr5 82642516 82642659 -120442873 + FLAM_A SINE Alu 1 133 0 414 0 0 0 chr5 82642668 82642714 -120442818 + (TA)n Simple_repeat Simple_repeat 2 47 0 27 29 0 0 chr5 82642894 82642928 -120442604 + AT_rich Low_complexity Low_complexity 1 34 0 583 275 78 26 chr5 82643897 82644243 -120441289 + L1ME4a LINE L1 5734 6097 -24 2489 173 79 38 chr5 82644286 82644696 -120440836 - Charlie1a DNA MER1_type -1311 1450 999 2511 181 114 50 chr5 82644696 82645435 -120440097 + LTR48 LTR ERV1 1 786 -1 2489 173 79 38 chr5 82645435 82645707 -120439825 - Charlie1a DNA MER1_type -1762 999 740 2046 184 11 45 chr5 82645750 82645800 -120439732 - Charlie1a DNA MER1_type -2309 452 402 2037 148 0 0 chr5 82645800 82646097 -120439435 + AluSx SINE Alu 1 297 -15 2046 184 11 45 chr5 82646097 82646514 -120439018 - Charlie1a DNA MER1_type -2359 402 1 225 65 0 0 chr5 82646538 82646569 -120438963 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 2025 154 3 3 chr5 82646573 82646879 -120438653 - AluSx SINE Alu -6 306 1 4426 169 37 17 chr5 82647376 82648521 -120437011 - L1MB3 LINE L1 0 6183 5016 1396 190 67 4 chr5 82648736 82648853 -120436679 + AluJb SINE Alu 1 109 -203 240 59 0 0 chr5 82648853 82648887 -120436645 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1396 190 67 4 chr5 82648887 82649038 -120436494 + AluJb SINE Alu 109 286 -26 266 170 0 0 chr5 82649766 82649813 -120435719 - AluJ/FLAM SINE Alu -222 80 34 1585 219 65 53 chr5 82651297 82651809 -120433723 - MLT2B1 LTR ERVL 0 520 3 196 313 211 23 chr5 82652638 82652766 -120432766 - MER5A DNA MER1_type 0 189 38 4613 211 6 32 chr5 82653232 82654408 -120431124 - L1PA13 LINE L1 -3098 3048 1904 * 9849 171 23 51 chr5 82654404 82656764 -120428768 + L1PA13 LINE L1 3043 5330 -835 2115 124 3 7 chr5 82656764 82657062 -120428470 + AluSp SINE Alu 1 297 -16 9849 171 23 51 chr5 82657062 82657223 -120428309 + L1PA13 LINE L1 5330 5494 -671 1066 167 0 0 chr5 82657223 82657379 -120428153 + AluSx SINE Alu 1 156 -156 1698 131 7 7 chr5 82657380 82657671 -120427861 + L1PA13 LINE L1 5795 6085 -78 2357 143 49 35 chr5 82658017 82658445 -120427087 + Tigger2a DNA MER2_type 1 434 0 5568 63 11 4 chr5 82658877 82659628 -120425904 - L1PA8A LINE L1 -1 6130 5375 1500 173 20 96 chr5 82660081 82660486 -120425046 + MLT1A2 LTR MaLR 1 374 0 429 20 0 0 chr5 82660534 82660584 -120424948 + (TA)n Simple_repeat Simple_repeat 1 50 0 553 268 66 36 chr5 82660856 82661356 -120424176 + L1M4 LINE L1 4795 5309 -837 239 93 0 23 chr5 82661679 82661722 -120423810 + L1ME1 LINE L1 5780 5821 -341 3837 177 41 12 chr5 82662096 82662824 -120422708 + L1M1 LINE L1 989 1737 -5828 5944 112 34 23 chr5 82662884 82663971 -120421561 + L1MA3 LINE L1 5207 6305 0 2218 142 3 6 chr5 82664126 82664464 -120421068 + MER1B DNA MER1_type 1 337 0 31 0 0 0 chr5 82665107 82665138 -120420394 + AT_rich Low_complexity Low_complexity 1 31 0 1188 162 49 84 chr5 82665956 82666005 -120419527 + MER6A DNA MER2_type 1 50 -555 2247 112 0 0 chr5 82666005 82666300 -120419232 + AluSg SINE Alu 16 310 0 1188 162 49 84 chr5 82666300 82666558 -120418974 + MER6A DNA MER2_type 50 297 -308 2250 140 0 0 chr5 82666562 82666926 -120418606 + MER6A DNA MER2_type 242 605 0 1664 153 36 33 chr5 82667480 82667781 -120417751 - AluJo SINE Alu -10 302 1 252 274 36 36 chr5 82667849 82667933 -120417599 - L2 LINE L2 -81 3191 3108 859 146 12 35 chr5 82667975 82668169 -120417363 + L1M1 LINE L1 5312 5500 -703 857 130 24 0 chr5 82668189 82668312 -120417220 + FRAM SINE Alu 24 149 -27 387 0 0 0 chr5 82668312 82668355 -120417177 + (CA)n Simple_repeat Simple_repeat 2 44 0 1841 148 44 3 chr5 82668662 82668959 -120416573 - AluSx SINE Alu -3 309 1 25 0 0 0 chr5 82668971 82668996 -120416536 + AT_rich Low_complexity Low_complexity 1 25 0 525 197 94 0 chr5 82669000 82669127 -120416405 + L1ME1 LINE L1 6010 6148 -18 1256 203 159 60 chr5 82669143 82669453 -120416079 + MER34 LTR ERV1 11 387 -155 2195 137 0 9 chr5 82669453 82669768 -120415764 - AluSx SINE Alu 0 312 1 1256 203 159 60 chr5 82669768 82669940 -120415592 + MER34 LTR ERV1 387 541 -1 26 50 0 0 chr5 82669947 82669987 -120415545 + AT_rich Low_complexity Low_complexity 1 40 0 2067 139 0 3 chr5 82670039 82670333 -120415199 + AluSx SINE Alu 1 293 -19 297 259 146 46 chr5 82670340 82670668 -120414864 + L1ME4a LINE L1 5642 6002 -119 717 256 0 34 chr5 82670766 82670942 -120414590 + AluJo SINE Alu 122 291 -21 291 307 68 27 chr5 82671220 82671634 -120413898 - L1M4 LINE L1 -1100 5046 4616 636 117 0 0 chr5 82671647 82671741 -120413791 - AluSg/x SINE Alu -8 302 209 30734 48 1 2 chr5 82671905 82675879 -120409653 - L1P LINE L1 -2173 3973 2 23245 87 4 6 chr5 82675876 82680212 -120405320 + L1PA7 LINE L1 1831 6154 0 * 2317 115 0 0 chr5 82680806 82681118 -120404414 - AluSx SINE Alu 0 312 1 804 201 58 0 chr5 82681410 82681599 -120403933 - MER63 DNA MER1_type 0 1060 861 303 167 191 36 chr5 82681662 82681706 -120403826 - MER63 DNA MER1_type -113 723 687 2650 128 67 17 chr5 82681706 82682168 -120403364 + MER31A LTR ERV1 1 485 0 303 167 191 36 chr5 82682168 82682207 -120403325 - MER63 DNA MER1_type -149 687 1 2252 101 0 0 chr5 82682369 82682665 -120402867 - AluSq SINE Alu -17 296 1 1874 166 7 3 chr5 82682897 82683198 -120402334 + AluJb SINE Alu 1 302 -10 881 266 84 40 chr5 82683209 82683323 -120402209 + L1ME3A LINE L1 5284 5391 -779 2141 137 0 0 chr5 82683323 82683623 -120401909 + AluSx SINE Alu 1 300 -12 881 266 84 40 chr5 82683623 82684065 -120401467 + L1ME3A LINE L1 5391 5865 -305 21 36 0 0 chr5 82684333 82684361 -120401171 + AT_rich Low_complexity Low_complexity 1 28 0 2016 145 3 3 chr5 82684544 82684847 -120400685 + AluSx SINE Alu 1 303 -9 2068 118 0 3 chr5 82685082 82685392 -120400140 - AluSx SINE Alu 0 309 1 183 243 0 0 chr5 82685494 82685531 -120400001 + L3 LINE CR1 1537 1573 -4 286 254 109 36 chr5 82686455 82686565 -120398967 + MIR SINE MIR 23 140 -68 785 292 60 30 chr5 82686892 82687324 -120398208 + L1ME3A LINE L1 4711 5177 -1028 1964 148 17 0 chr5 82687324 82687622 -120397910 - AluSx SINE Alu -8 304 2 785 292 60 30 chr5 82687622 82687913 -120397619 + L1ME3A LINE L1 5177 5458 -747 272 292 146 18 chr5 82687919 82688200 -120397332 + L1ME3A LINE L1 5637 5953 -217 2135 120 3 13 chr5 82688215 82688514 -120397018 + AluSx SINE Alu 1 296 -16 627 98 22 55 chr5 82689060 82689243 -120396289 + (TCTCCC)n Simple_repeat Simple_repeat 1 177 0 3425 42 21 23 chr5 82689248 82689725 -120395807 + SVA Other Other 2 477 -909 6114 74 16 46 chr5 82690060 82691016 -120394516 + SVA Other Other 457 1383 -3 275 232 99 13 chr5 82691020 82691171 -120394361 - MER112 DNA MER1_type -89 171 8 1687 153 3 62 chr5 82691215 82691522 -120394010 - AluJo SINE Alu -23 289 1 2081 137 0 3 chr5 82691549 82691842 -120393690 - AluSx SINE Alu -9 303 12 1334 253 28 28 chr5 82691934 82692330 -120393202 + MSTD LTR MaLR 1 396 0 434 250 70 35 chr5 82692357 82692529 -120393003 + MER5A DNA MER1_type 7 184 -5 348 200 69 30 chr5 82693721 82693885 -120391647 - MLT1B LTR MaLR -24 366 269 430 227 227 0 chr5 82694520 82694683 -120390849 - MIR SINE MIR -9 253 54 186 162 0 27 chr5 82695358 82695395 -120390137 - L3 LINE CR1 -866 711 676 1109 237 113 80 chr5 82695757 82695790 -120389742 + MLT1E LTR MaLR 1 31 -562 1836 184 0 0 chr5 82695790 82696084 -120389448 + AluJb SINE Alu 1 294 -18 1109 237 113 80 chr5 82696084 82696510 -120389022 + MLT1E LTR MaLR 31 475 -118 1472 170 4 4 chr5 82697443 82697673 -120387859 + AluJo SINE Alu 53 282 -30 1049 346 54 42 chr5 82697800 82698640 -120386892 + ERVL LTR ERVL 798 1647 -4117 1316 249 47 18 chr5 82698777 82699203 -120386329 + MLT1E1 LTR MaLR 8 424 -230 2089 90 35 3 chr5 82699304 82699594 -120385938 + LTR12 LTR ERV1 416 714 0 1874 143 48 0 chr5 82699600 82699894 -120385638 - L1P LINE L1 -5837 309 2 2257 134 94 8 chr5 82700188 82700582 -120384950 - MSTA LTR MaLR 0 428 1 2146 110 3 35 chr5 82700739 82701056 -120384476 + AluY SINE Alu 1 307 -4 1892 62 25 0 chr5 82701139 82701382 -120384150 - L1PA7 LINE L1 -1 6153 5905 2015 222 61 61 chr5 82701382 82702060 -120383472 + L1M4 LINE L1 4096 4773 -1373 990 228 5 9 chr5 82702060 82702279 -120383253 - MER20 DNA MER1_type -1 218 1 2015 222 61 61 chr5 82702279 82702351 -120383181 + L1M4 LINE L1 4773 4849 -1297 1883 122 0 8 chr5 82702351 82702614 -120382918 - AluSx SINE Alu -13 299 39 2015 222 61 61 chr5 82702614 82702649 -120382883 + L1M4 LINE L1 4848 4882 -1264 7912 28 6 0 chr5 82702749 82704455 -120381077 + L1PA4 LINE L1 4437 6147 -8 407 267 47 20 chr5 82704587 82704737 -120380795 + L1ME1 LINE L1 5923 6076 -90 242 361 59 17 chr5 82705166 82705285 -120380247 + MER5A DNA MER1_type 66 189 0 24 77 0 0 chr5 82705322 82705374 -120380158 + AT_rich Low_complexity Low_complexity 1 52 0 202 214 24 0 chr5 82705513 82705555 -120379977 - L2 LINE L2 -20 3293 3251 272 280 97 0 chr5 82705556 82705649 -120379883 - MIR SINE MIR -106 156 55 267 263 53 0 chr5 82705672 82705688 -120379844 - L1MA4A LINE L1 -2 6301 6286 12615 190 48 28 chr5 82705688 82709472 -120376060 - L1PB4 LINE L1 -6 6852 2968 2269 100 3 0 chr5 82709472 82709761 -120375771 - AluSg SINE Alu -16 294 5 12615 190 48 28 chr5 82709761 82710010 -120375522 - L1PB4 LINE L1 -3890 2968 2725 1465 160 101 11 chr5 82710285 82710553 -120374979 - AluJo SINE Alu -9 293 2 217 253 187 0 chr5 82710689 82710764 -120374768 + MIR3 SINE MIR 109 197 -11 5256 124 13 4 chr5 82710779 82711567 -120373965 + L1PA16 LINE L1 5362 6156 -10 1104 148 66 0 chr5 82711899 82712095 -120373437 - MER3 DNA MER1_type 0 209 1 759 281 101 0 chr5 82713606 82713834 -120371698 + MIR SINE MIR 10 260 -2 22 0 0 0 chr5 82714264 82714286 -120371246 + AT_rich Low_complexity Low_complexity 1 22 0 25 102 0 0 chr5 82715022 82715110 -120370422 + AT_rich Low_complexity Low_complexity 1 88 0 290 242 137 11 chr5 82715320 82715415 -120370117 - MIR SINE MIR -110 152 46 24 53 0 0 chr5 82716389 82716427 -120369105 + AT_rich Low_complexity Low_complexity 1 38 0 1012 182 93 18 chr5 82716930 82717155 -120368377 + Charlie1 DNA MER1_type 1 242 -2519 772 146 22 7 chr5 82717138 82717275 -120368257 + Charlie1 DNA MER1_type 2623 2761 0 * 9120 26 0 0 chr5 82719281 82720968 -120364564 - L1PA3 LINE L1 -177 5978 4292 821 11 0 0 chr5 82720950 82721043 -120364489 + L1PA3 LINE L1 4220 4312 -1834 * 435 256 23 61 chr5 82722232 82722387 -120363145 - MIR SINE MIR -82 126 14 991 73 0 0 chr5 82723280 82723404 -120362128 + AluY SINE Alu 144 267 -44 281 298 168 0 chr5 82724439 82724647 -120360885 - L1ME LINE L1 -331 5790 5548 2264 97 3 0 chr5 82724809 82725097 -120360435 - AluSc SINE Alu -20 289 1 21 0 0 0 chr5 82725387 82725408 -120360124 + AT_rich Low_complexity Low_complexity 1 21 0 654 65 0 11 chr5 82776221 82776314 -120309218 + L1M1 LINE L1 2823 2914 -4651 521 144 21 10 chr5 82776314 82776411 -120309121 + MER4A LTR ERV1 1 98 -566 1708 153 3 43 chr5 82776411 82776450 -120309082 + MER4A LTR ERV1 261 300 -364 2176 68 43 0 chr5 82776450 82776729 -120308803 + AluY SINE Alu 1 291 -20 1708 153 3 43 chr5 82776729 82777049 -120308483 + MER4A LTR ERV1 300 664 0 2151 97 134 20 chr5 82777052 82777344 -120308188 + MER4A-int LTR ERV1 1 258 -6340 219 36 0 0 chr5 82777344 82777372 -120308160 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2151 97 134 20 chr5 82777372 82777711 -120307821 + MER4A-int LTR ERV1 258 825 -5773 255 148 74 37 chr5 82777780 82777834 -120307698 + LTR49 LTR ERV1 258 313 -282 1068 115 125 0 chr5 82777853 82778061 -120307471 + MER4A-int LTR ERV1 993 1226 -5372 378 0 0 0 chr5 82778061 82778103 -120307429 + (T)n Simple_repeat Simple_repeat 1 42 0 1617 148 12 4 chr5 82778136 82778393 -120307139 - AluSq SINE Alu -11 302 44 24846 99 13 6 chr5 82778455 82778999 -120306533 - L1P3 LINE L1 -967 5494 4955 2106 133 0 13 chr5 82778999 82779307 -120306225 - AluSg SINE Alu -6 304 1 24846 99 13 6 chr5 82779307 82782650 -120302882 - L1P3 LINE L1 -1506 4955 1581 2941 124 30 81 chr5 82782658 82783288 -120302244 - LTR14B LTR ERVK 0 608 11 10724 102 12 3 chr5 82783288 82784849 -120300683 - L1P3 LINE L1 -4881 1580 5 3794 112 66 34 chr5 82784849 82785592 -120299940 + MER4A-int LTR ERV1 1472 2238 -4360 2214 73 70 23 chr5 82785579 82785718 -120299814 + MER4-int LTR ERV1 2093 2224 -4374 * 2262 109 3 0 chr5 82785718 82786012 -120299520 + AluSp SINE Alu 1 295 -18 2214 73 70 23 chr5 82786012 82786257 -120299275 + MER4-int LTR ERV1 2224 2495 -4103 1236 151 71 4 chr5 82786257 82786495 -120299037 - LTR8 LTR ERV1 -434 257 4 3842 133 65 37 chr5 82786497 82787417 -120298115 + MER4A-int LTR ERV1 2736 3681 -2917 * 11250 100 51 24 chr5 82787416 82787553 -120297979 + MER4A-int LTR ERV1 3837 3969 -2629 1781 139 10 30 chr5 82787553 82787848 -120297684 + AluSx SINE Alu 1 289 -23 11250 100 51 24 chr5 82787848 82790321 -120295211 + MER4A-int LTR ERV1 3969 6596 -2 564 115 31 10 chr5 82790330 82790426 -120295106 + MER4A LTR ERV1 1 98 -566 1724 138 9 19 chr5 82790426 82790775 -120294757 + MER4A LTR ERV1 261 664 0 3619 121 68 25 chr5 82790777 82791502 -120294030 + L1M1 LINE L1 2913 3668 -3897 310 325 191 5 chr5 82791738 82791947 -120293585 + MIR SINE MIR 3 250 -12 471 216 45 20 chr5 82792150 82792349 -120293183 - L1MC/D LINE L1 -2340 5468 5265 2046 133 13 3 chr5 82792605 82792907 -120292625 + AluSx SINE Alu 1 305 -7 723 91 27 9 chr5 82793158 82793268 -120292264 - L1PA16 LINE L1 -9 6157 6046 2000 194 79 3 chr5 82793322 82793703 -120291829 + MER83B-int LTR ERV1 317 726 -4154 518 81 0 0 chr5 82793714 82793788 -120291744 - Alu SINE Alu -1 308 235 2671 51 0 0 chr5 82793810 82794121 -120291411 - AluY SINE Alu 0 311 1 5012 133 17 10 chr5 82794121 82795593 -120289939 + MER83B-int LTR ERV1 712 4253 -627 3545 86 59 4 chr5 82795593 82796083 -120289449 + LTR17 LTR ERV1 256 772 -8 5408 82 1 17 chr5 82796096 82796794 -120288738 + HERV17 LTR ERV1 1 687 -7939 4658 74 20 0 chr5 82796959 82797567 -120287965 + HERV17 LTR ERV1 798 1417 -7209 560 147 0 11 chr5 82797567 82797662 -120287870 + MER83B LTR ERV1 285 378 0 180 0 0 0 chr5 82797717 82797737 -120287795 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1443 114 65 46 chr5 82798033 82798296 -120287236 + MER65A LTR ERV1 178 445 0 281 311 72 49 chr5 82798367 82798756 -120286776 - L1MC/D LINE L1 -1231 4915 4518 1548 177 0 0 chr5 82799093 82799347 -120286185 - AluJb SINE Alu -4 308 55 1866 123 67 21 chr5 82799383 82799668 -120285864 + AluY SINE Alu 2 299 -12 302 295 168 0 chr5 82800933 82801028 -120284504 + L2 LINE L2 3148 3258 -14 186 43 0 0 chr5 82801029 82801052 -120284480 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 194 33 67 0 chr5 82801287 82801317 -120284215 + T-rich Low_complexity Low_complexity 2 33 0 886 192 0 0 chr5 82801320 82801466 -120284066 - FRAM SINE Alu -30 146 1 1742 160 32 0 chr5 82801700 82801981 -120283551 - AluJb SINE Alu -22 290 1 362 233 22 22 chr5 82802059 82802149 -120283383 - MIR SINE MIR -75 133 44 241 314 161 8 chr5 82802680 82802804 -120282728 + MIR3 SINE MIR 41 183 -25 21 0 0 0 chr5 82803261 82803282 -120282250 + AT_rich Low_complexity Low_complexity 1 21 0 405 248 52 46 chr5 82803282 82803435 -120282097 - L1ME4a LINE L1 -2 6119 5966 2342 87 0 7 chr5 82803681 82803981 -120281551 + AluSx SINE Alu 1 298 -14 1132 255 74 86 chr5 82803990 82804577 -120280955 - L1MCc LINE L1 -3604 3337 2744 1684 173 60 0 chr5 82804577 82804860 -120280672 - AluSx SINE Alu -12 300 1 1132 255 74 86 chr5 82804860 82804887 -120280645 - L1MCc LINE L1 -4197 2744 2718 2127 117 3 0 chr5 82804887 82805178 -120280354 - AluSq SINE Alu -21 292 1 1132 255 74 86 chr5 82805178 82805588 -120279944 - L1MCc LINE L1 -4223 2718 2366 802 123 0 0 chr5 82805589 82805695 -120279837 + AluSq/x SINE Alu 2 107 -206 2245 105 3 0 chr5 82806033 82806327 -120279205 - AluSc SINE Alu -14 295 1 385 283 116 44 chr5 82806355 82806972 -120278560 - L1MCc LINE L1 -4909 1514 1183 1143 146 17 100 chr5 82807407 82807646 -120277886 + MER20 DNA MER1_type 1 219 0 2553 36 0 7 chr5 82808206 82808507 -120277025 - AluY SINE Alu -12 299 1 1743 163 58 0 chr5 82808858 82809017 -120276515 - AluJo SINE Alu -19 293 110 1034 104 0 6 chr5 82809017 82809181 -120276351 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 1743 163 58 0 chr5 82809181 82809298 -120276234 - AluJo SINE Alu -202 110 1 1204 43 0 0 chr5 82809344 82809482 -120276050 + LTR66 LTR ERVL 1 138 -472 2061 72 115 0 chr5 82809582 82809861 -120275671 + LTR66 LTR ERVL 300 610 0 630 204 0 0 chr5 82809861 82809959 -120275573 - AluJ/FLAM SINE Alu -214 98 1 2280 109 0 3 chr5 82810209 82810513 -120275019 - AluSx SINE Alu -9 303 1 476 261 70 0 chr5 82812116 82812258 -120273274 - MER21B LTR ERV1 -51 812 661 613 201 43 7 chr5 82812263 82812402 -120273130 - LTR36 LTR ERV1 0 611 468 1409 150 5 5 chr5 82812407 82812627 -120272905 + AluJb SINE Alu 5 224 -88 1737 111 4 30 chr5 82812802 82813072 -120272460 - AluSx SINE Alu -4 308 46 957 123 0 0 chr5 82813172 82813294 -120272238 - AluSq/x SINE Alu -190 122 1 349 252 106 83 chr5 82813298 82813552 -120271980 - LTR38 LTR ERV1 -208 348 89 2305 106 0 3 chr5 82813584 82813886 -120271646 + AluSx SINE Alu 1 301 -11 2498 240 55 35 chr5 82813961 82814524 -120271008 - MER21B LTR ERV1 -197 666 87 1556 177 16 43 chr5 82814524 82814648 -120270884 + AluJb SINE Alu 1 127 -185 2069 123 0 30 chr5 82814648 82814949 -120270583 - AluSx SINE Alu -20 292 1 1556 177 16 43 chr5 82814949 82815129 -120270403 + AluJb SINE Alu 127 297 -15 2498 240 55 35 chr5 82815129 82815218 -120270314 - MER21B LTR ERV1 -776 87 1 475 318 128 26 chr5 82815832 82816175 -120269357 + MLT1J LTR MaLR 98 475 -36 249 291 62 49 chr5 82816658 82816845 -120268687 + L1M4 LINE L1 4940 5134 -1012 2391 82 0 0 chr5 82816845 82817139 -120268393 - AluY SINE Alu -17 294 1 249 291 62 49 chr5 82817139 82817257 -120268275 + L1M4 LINE L1 5134 5249 -897 224 167 56 0 chr5 82817364 82817418 -120268114 + T-rich Low_complexity Low_complexity 2 58 0 1643 138 0 4 chr5 82817439 82817670 -120267862 - AluSq SINE Alu -83 230 1 707 292 52 23 chr5 82818699 82819007 -120266525 + LTR16C LTR ERVL 175 491 0 2293 86 10 0 chr5 82819047 82819337 -120266195 + AluSg SINE Alu 1 293 -17 220 229 0 0 chr5 82819932 82819980 -120265552 + (TA)n Simple_repeat Simple_repeat 2 49 0 1085 253 93 49 chr5 82820993 82821125 -120264407 + MLT1J LTR MaLR 70 195 -316 258 56 0 0 chr5 82821125 82821161 -120264371 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1085 253 93 49 chr5 82821161 82821436 -120264096 + MLT1J LTR MaLR 195 495 -16 1623 72 14 14 chr5 82821766 82821975 -120263557 + AluSq SINE Alu 1 209 -104 3213 65 82 0 chr5 82822076 82822493 -120263039 + LTR66 LTR ERVL 160 610 0 630 204 0 0 chr5 82822493 82822591 -120262941 - AluJ/FLAM SINE Alu -214 98 1 2147 109 0 16 chr5 82822841 82823145 -120262387 - AluSx SINE Alu -9 303 5 721 288 37 8 chr5 82824289 82824532 -120261000 + MIR SINE MIR 13 262 0 1645 120 4 66 chr5 82824707 82824840 -120260692 + AluSx SINE Alu 4 144 -168 2355 63 0 17 chr5 82824840 82825141 -120260391 + AluY SINE Alu 1 296 -15 417 39 0 0 chr5 82825151 82825202 -120260330 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 120 4 66 chr5 82825202 82825316 -120260216 + AluSx SINE Alu 153 246 -66 4808 150 63 38 chr5 82825316 82826401 -120259131 + pTR5 LTR ERV1 745 2025 -413 311 245 31 20 chr5 82826401 82826499 -120259033 + LTR30 LTR ERV1 544 642 -80 2151 131 3 3 chr5 82826499 82826828 -120258704 + pTR5 LTR ERV1 66 394 -2044 22 35 0 0 chr5 82826855 82826884 -120258648 + AT_rich Low_complexity Low_complexity 1 29 0 180 111 0 0 chr5 82827332 82827359 -120258173 + (T)n Simple_repeat Simple_repeat 1 27 0 374 310 21 78 chr5 82827402 82827544 -120257988 + L2 LINE L2 3138 3271 -1 324 282 111 34 chr5 82827560 82827751 -120257781 + MIR SINE MIR 8 214 -48 209 351 84 21 chr5 82828237 82828428 -120257104 - L2 LINE L2 -640 2674 2472 343 286 79 121 chr5 82829011 82829629 -120255903 - L1M2 LINE L1 -5501 1348 757 379 198 12 25 chr5 82830497 82830578 -120254954 + MER116 DNA Mariner 1 80 0 187 250 0 0 chr5 82830675 82830711 -120254821 - MIR SINE MIR -141 67 32 180 111 0 0 chr5 82830721 82830748 -120254784 + (T)n Simple_repeat Simple_repeat 1 27 0 2862 0 0 0 chr5 82831117 82831419 -120254113 + AluYa5 SINE Alu 1 302 -9 1557 158 8 0 chr5 82832271 82832505 -120253027 + MER46A DNA MER2_type 1 236 0 503 254 12 77 chr5 82832829 82833077 -120252455 + MER112 DNA MER1_type 17 248 -12 1718 169 10 30 chr5 82834849 82834989 -120250543 + AluJo SINE Alu 1 142 -170 2364 63 0 17 chr5 82834989 82835289 -120250243 + AluY SINE Alu 1 295 -16 1718 169 10 30 chr5 82835289 82835449 -120250083 + AluJo SINE Alu 142 295 -17 587 246 107 63 chr5 82836288 82836421 -120249111 - L1ME4a LINE L1 -112 6009 5883 2256 111 0 0 chr5 82836421 82836718 -120248814 - AluSq SINE Alu -16 297 1 587 246 107 63 chr5 82836718 82837044 -120248488 - L1ME4a LINE L1 -238 5883 5530 21 57 0 0 chr5 82837168 82837203 -120248329 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 82837826 82837846 -120247686 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1952 148 0 0 chr5 82837846 82838129 -120247403 - AluSx SINE Alu -29 283 1 2204 91 3 24 chr5 82838541 82838839 -120246693 + AluSq SINE Alu 1 292 -21 21 0 0 0 chr5 82839234 82839255 -120246277 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 82839972 82839996 -120245536 + AT_rich Low_complexity Low_complexity 1 24 0 374 208 61 0 chr5 82840026 82840130 -120245402 - L1ME1 LINE L1 0 6164 6052 254 227 13 27 chr5 82841084 82841159 -120244373 + MIR3 SINE MIR 130 203 -5 484 335 43 22 chr5 82843488 82843718 -120241814 - MIR SINE MIR -8 254 20 252 61 0 0 chr5 82844029 82844062 -120241470 - L1MA9 LINE L1 0 6312 6280 300 25 25 0 chr5 82844065 82844105 -120241427 + (TTA)n Simple_repeat Simple_repeat 2 180 0 790 143 0 0 chr5 82844105 82844217 -120241315 - AluSg/x SINE Alu -1 324 174 2064 123 0 7 chr5 82844108 82844392 -120241140 - AluSx SINE Alu -30 282 1 201 121 0 0 chr5 82844907 82844940 -120240592 + (TG)n Simple_repeat Simple_repeat 2 34 0 678 214 70 19 chr5 82844956 82845269 -120240263 + L1MB2 LINE L1 5190 5520 -785 2363 91 3 0 chr5 82845289 82845598 -120239934 - AluSp SINE Alu -1 312 3 30 27 0 0 chr5 82845655 82845692 -120239840 + AT_rich Low_complexity Low_complexity 1 37 0 243 268 0 0 chr5 82845726 82845782 -120239750 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 2284 98 0 3 chr5 82847802 82848109 -120237423 + AluSx SINE Alu 1 306 -6 1033 222 0 5 chr5 82848510 82848708 -120236824 + AluJo SINE Alu 24 220 -92 216 158 0 0 chr5 82848737 82848775 -120236757 + (TCCG)n Simple_repeat Simple_repeat 3 40 0 265 267 0 0 chr5 82848777 82848852 -120236680 + Tigger5 DNA MER2_type 2249 2323 0 2463 149 10 51 chr5 82848874 82849384 -120236148 + L1MB2 LINE L1 5573 6061 -110 3090 68 9 2 chr5 82849385 82849814 -120235718 + L1PA8 LINE L1 5721 6152 -20 477 146 146 0 chr5 82849814 82849917 -120235615 + L1MB2 LINE L1 6050 6167 -4 29 0 0 0 chr5 82850829 82850858 -120234674 + AT_rich Low_complexity Low_complexity 1 29 0 383 235 147 0 chr5 82855054 82855190 -120230342 - MER5A DNA MER1_type -2 187 32 363 23 0 0 chr5 82855801 82855845 -120229687 + (TG)n Simple_repeat Simple_repeat 2 45 0 1817 122 36 16 chr5 82856359 82856662 -120228870 - MER1B DNA MER1_type 0 339 31 1548 111 10 5 chr5 82856850 82857057 -120228475 - AluSg/x SINE Alu -19 291 84 34 72 0 0 chr5 82857070 82857139 -120228393 + AT_rich Low_complexity Low_complexity 1 69 0 193 150 33 117 chr5 82857179 82857239 -120228293 + L2 LINE L2 3144 3198 -74 522 261 56 12 chr5 82857358 82857519 -120228013 + MIR3 SINE MIR 30 197 -11 2215 93 14 0 chr5 82858197 82858486 -120227046 + AluSp SINE Alu 5 297 -16 1936 119 14 4 chr5 82858516 82858793 -120226739 + AluSx SINE Alu 14 293 -19 2507 76 0 0 chr5 82859807 82860108 -120225424 - AluSg SINE Alu -7 303 3 210 152 0 0 chr5 82860207 82860240 -120225292 + L2 LINE L2 3269 3301 -12 311 175 0 18 chr5 82860699 82860756 -120224776 - Tigger5 DNA MER2_type -5 2318 2263 367 213 0 0 chr5 82860776 82860851 -120224681 - Tigger5 DNA MER2_type 0 2323 2249 2105 124 0 10 chr5 82860852 82861150 -120224382 - AluSx SINE Alu -17 295 1 362 211 0 0 chr5 82861152 82861223 -120224309 + Tigger5 DNA MER2_type 2242 2312 -11 234 203 145 0 chr5 82861228 82861297 -120224235 - Tigger5 DNA MER2_type -2244 79 1 320 287 87 0 chr5 82862441 82862591 -120222941 + MER112 DNA MER1_type 7 169 -91 2314 111 0 0 chr5 82862604 82862910 -120222622 + AluSx SINE Alu 1 306 -6 201 171 0 0 chr5 82866129 82866164 -120219368 + A-rich Low_complexity Low_complexity 1 35 0 1674 164 18 7 chr5 82867237 82867581 -120217951 + AluJb SINE Alu 1 347 0 30 0 0 0 chr5 82867581 82867611 -120217921 + AT_rich Low_complexity Low_complexity 1 30 0 972 275 98 28 chr5 82869056 82869626 -120215906 + L1MC4a LINE L1 5359 5968 -1840 1416 183 67 14 chr5 82869734 82870019 -120215513 - AluJo SINE Alu -2 300 1 2190 102 0 0 chr5 82870076 82870361 -120215171 + AluSq SINE Alu 1 285 -28 287 250 120 38 chr5 82870395 82870579 -120214953 + L1MC4a LINE L1 5684 5882 -1926 1735 166 7 18 chr5 82870835 82871148 -120214384 + AluJo SINE Alu 1 310 0 2234 92 7 0 chr5 82871527 82871820 -120213712 - AluSc SINE Alu -14 295 1 2262 81 30 3 chr5 82872445 82872742 -120212790 + AluSg1 SINE Alu 1 305 -4 234 341 32 56 chr5 82872756 82872882 -120212650 - MER5B DNA MER1_type -34 144 22 1147 139 14 79 chr5 82873304 82873520 -120212012 - AluJo SINE Alu -22 290 89 811 188 48 0 chr5 82874219 82874405 -120211127 - L1MB4 LINE L1 0 6180 5986 421 201 60 15 chr5 82875012 82875146 -120210386 + L1MB4 LINE L1 5961 6100 -80 23 33 0 0 chr5 82875240 82875270 -120210262 + AT_rich Low_complexity Low_complexity 1 30 0 721 176 0 17 chr5 82876202 82876321 -120209211 + FLAM_A SINE Alu 11 127 -15 2190 126 0 0 chr5 82877130 82877424 -120208108 + AluSq SINE Alu 1 294 -19 327 329 49 44 chr5 82877481 82877684 -120207848 + MIR SINE MIR 20 221 -41 26 50 0 0 chr5 82877791 82877831 -120207701 + AT_rich Low_complexity Low_complexity 1 40 0 470 263 25 8 chr5 82878305 82878423 -120207109 + L2 LINE L2 3191 3310 -3 25 0 0 0 chr5 82878503 82878528 -120207004 + AT_rich Low_complexity Low_complexity 1 25 0 2334 86 0 3 chr5 82878808 82879100 -120206432 - AluSq SINE Alu -14 299 9 2372 102 0 0 chr5 82879399 82879704 -120205828 + AluSq SINE Alu 1 305 -8 342 0 0 0 chr5 82880539 82880577 -120204955 + (TA)n Simple_repeat Simple_repeat 2 39 0 1716 166 7 4 chr5 82880582 82880860 -120204672 - AluJb SINE Alu -33 279 1 31 58 0 0 chr5 82882357 82882409 -120203123 + AT_rich Low_complexity Low_complexity 1 52 0 848 214 14 0 chr5 82882758 82882898 -120202634 - FRAM SINE Alu -30 146 5 1438 163 37 8 chr5 82882903 82883149 -120202383 - AluJo SINE Alu -17 295 43 2397 87 0 3 chr5 82884622 82884932 -120200600 + AluY SINE Alu 1 309 -2 600 180 107 25 chr5 82885431 82885583 -120199949 + FLAM_C SINE Alu 2 163 0 2032 116 0 7 chr5 82885639 82885931 -120199601 + AluSc SINE Alu 1 290 -19 1511 129 70 52 chr5 82886201 82886473 -120199059 + AluJo SINE Alu 21 297 -15 1247 162 4 38 chr5 82886476 82886711 -120198821 + AluJb SINE Alu 86 312 0 431 235 0 0 chr5 82886717 82886819 -120198713 + L1ME LINE L1 5598 5699 -422 1149 128 39 81 chr5 82887301 82887535 -120197997 + AluJo SINE Alu 85 308 -4 2211 100 40 10 chr5 82887536 82887871 -120197661 + AluSx SINE Alu 2 345 0 2410 89 0 9 chr5 82888400 82888716 -120196816 + AluSq SINE Alu 1 313 0 2331 100 0 7 chr5 82889695 82890004 -120195528 + AluSg SINE Alu 1 307 -3 229 272 120 6 chr5 82890330 82890459 -120195073 - MIR SINE MIR -10 252 30 2049 117 18 0 chr5 82891813 82892095 -120193437 + AluSc SINE Alu 1 287 -22 489 331 54 0 chr5 82893293 82893459 -120192073 - MIR3 SINE MIR -14 194 20 2213 83 0 24 chr5 82894481 82894771 -120190761 + AluSg SINE Alu 13 295 -15 1072 190 117 8 chr5 82895267 82895514 -120190018 + MER58 DNA MER1_type 1 274 -2146 328 359 0 16 chr5 82895700 82895828 -120189704 - MER5A DNA MER1_type -29 160 35 207 0 0 0 chr5 82896248 82896271 -120189261 + (A)n Simple_repeat Simple_repeat 1 23 0 1531 173 10 31 chr5 82896683 82896998 -120188534 + AluSx SINE Alu 1 309 0 292 329 216 6 chr5 82897147 82897503 -120188029 + L2 LINE L2 1946 2376 -938 850 142 115 111 chr5 82897633 82897886 -120187646 + Tigger7 DNA MER2_type 2238 2491 0 285 407 51 0 chr5 82897904 82898081 -120187451 + L2 LINE L2 2556 2741 -573 202 361 0 14 chr5 82898423 82898495 -120187037 + L2 LINE L2 3212 3282 -31 2103 113 3 17 chr5 82898497 82898799 -120186733 - AluSx SINE Alu -14 298 1 22 56 0 0 chr5 82899255 82899291 -120186241 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 82899418 82899440 -120186092 + AT_rich Low_complexity Low_complexity 1 22 0 194 133 0 22 chr5 82899483 82899528 -120186004 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 609 78 0 0 chr5 82899563 82899640 -120185892 + L1PA15 LINE L1 5806 5882 -283 4222 67 76 69 chr5 82899640 82899839 -120185693 + PABL_A LTR ERV1 1 197 -463 840 153 23 28 chr5 82899839 82900016 -120185516 - L1MB2 LINE L1 0 6171 5996 4222 67 76 69 chr5 82900016 82900471 -120185061 + PABL_A LTR ERV1 197 660 0 1231 186 37 15 chr5 82900474 82900743 -120184789 + L1PB4 LINE L1 5882 6156 0 26 0 0 0 chr5 82901052 82901078 -120184454 + AT_rich Low_complexity Low_complexity 1 26 0 2263 80 0 7 chr5 82901489 82901775 -120183757 - AluSg SINE Alu -20 290 7 1515 131 120 26 chr5 82901786 82902053 -120183479 - AluJo SINE Alu -14 298 7 2499 40 0 3 chr5 82902282 82902579 -120182953 + AluY SINE Alu 1 296 -15 21 36 0 0 chr5 82902855 82902883 -120182649 + AT_rich Low_complexity Low_complexity 1 28 0 210 37 0 0 chr5 82903255 82903282 -120182250 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2204 102 0 0 chr5 82903282 82903567 -120181965 - AluSg SINE Alu -25 285 1 277 279 163 12 chr5 82904216 82904302 -120181230 + MER94 DNA DNA 35 133 -1 3783 121 92 10 chr5 82904447 82905140 -120180392 - Tigger3(Golem) DNA MER2_type -2 3027 2278 681 167 0 0 chr5 82905131 82905239 -120180293 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 983 211 0 6 chr5 82905418 82905589 -120179943 + FAM SINE Alu 1 170 -5 243 61 0 0 chr5 82905624 82905657 -120179875 + (CA)n Simple_repeat Simple_repeat 2 34 0 2234 217 69 40 chr5 82905714 82906369 -120179163 + L1ME3 LINE L1 5483 6156 -6 271 309 106 0 chr5 82906760 82906854 -120178678 + L2 LINE L2 3144 3247 -25 198 0 0 0 chr5 82906994 82907016 -120178516 + (CA)n Simple_repeat Simple_repeat 2 23 0 269 284 11 21 chr5 82907062 82907157 -120178375 + (CATA)n Simple_repeat Simple_repeat 2 95 0 420 176 33 33 chr5 82908156 82908247 -120177285 + MIR3 SINE MIR 112 202 -6 307 229 0 24 chr5 82958649 82958732 -120126800 - L1 LINE L1 -987 5341 5261 723 179 8 0 chr5 82958732 82958855 -120126677 + AluJ SINE Alu 1 124 -188 223 111 0 111 chr5 82958869 82958941 -120126591 + (TAAAAA)n Simple_repeat Simple_repeat 1 64 0 952 220 0 0 chr5 82958942 82959119 -120126413 + AluJ SINE Alu 130 306 -6 13120 183 35 21 chr5 82959120 82960601 -120124931 - L1 LINE L1 -1057 5271 3813 180 0 0 0 chr5 82960601 82960621 -120124911 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 13120 183 35 21 chr5 82960621 82961293 -120124239 - L1 LINE L1 -2515 3813 3152 1279 217 76 4 chr5 82961293 82961556 -120123976 - AluJo SINE Alu -30 282 1 13120 183 35 21 chr5 82961556 82962817 -120122715 - L1 LINE L1 -3176 3152 1911 1515 217 7 19 chr5 82962817 82963126 -120122406 - AluJo SINE Alu -4 308 4 13120 183 35 21 chr5 82963126 82964902 -120120630 - L1 LINE L1 -4417 1911 10 1504 212 110 16 chr5 82964912 82965411 -120120121 - Looper DNA T2_type -1005 553 8 2341 95 3 0 chr5 82966279 82966585 -120118947 + AluSx SINE Alu 1 307 -5 1894 267 91 30 chr5 82966991 82968270 -120117262 + L1ME LINE L1 2 1487 -4593 458 302 115 25 chr5 82968279 82968514 -120117018 + MIR SINE MIR 7 262 0 235 105 0 0 chr5 82968641 82968679 -120116853 + AluSx SINE Alu 283 320 0 2162 132 3 0 chr5 82969001 82969312 -120116220 - AluSx SINE Alu 0 312 1 1289 134 169 35 chr5 82969664 82969925 -120115607 + AluJo SINE Alu 1 296 -6 351 0 0 0 chr5 82969934 82969973 -120115559 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 222 0 0 chr5 82969974 82970028 -120115504 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 542 259 43 0 chr5 82970259 82970421 -120115111 + L1ME4a LINE L1 5671 5839 -282 24 0 0 0 chr5 82970671 82970695 -120114837 + AT_rich Low_complexity Low_complexity 1 24 0 228 224 134 49 chr5 82970710 82970933 -120114599 + L1ME4a LINE L1 5878 6119 -2 1546 198 10 14 chr5 82970965 82971253 -120114279 + AluJo SINE Alu 5 291 -21 1083 200 0 33 chr5 82971322 82971489 -120114043 + MER2 DNA MER2_type 1 161 -184 2637 114 23 40 chr5 82971489 82971918 -120113614 - MSTB LTR MaLR 0 426 5 1083 200 0 33 chr5 82971918 82971960 -120113572 + MER2 DNA MER2_type 161 203 -142 684 175 110 0 chr5 82971986 82972140 -120113392 + MER2 DNA MER2_type 172 342 -3 1002 92 0 0 chr5 82972673 82972804 -120112728 - AluSg/x SINE Alu -4 308 178 850 133 0 7 chr5 82972824 82972959 -120112573 - AluSg/x SINE Alu 0 310 177 2260 85 7 7 chr5 82973227 82973534 -120111998 - AluY SINE Alu 0 311 5 320 220 17 40 chr5 82973695 82973868 -120111664 + (TA)n Simple_repeat Simple_repeat 2 170 0 238 175 0 0 chr5 82973879 82973919 -120111613 + MER5C DNA MER1_type 1 40 -284 2240 111 0 0 chr5 82973944 82974241 -120111291 + AluSg1 SINE Alu 1 297 -12 538 215 123 34 chr5 82974254 82974472 -120111060 - MLT1F LTR MaLR -69 473 175 5830 109 12 17 chr5 82974516 82976415 -120109117 - L1PA15 LINE L1 0 6816 4912 2265 127 0 0 chr5 82976415 82976714 -120108818 + AluSx SINE Alu 1 299 -13 5830 109 12 17 chr5 82976714 82976786 -120108746 - L1PA15 LINE L1 -1904 4912 4841 363 125 0 0 chr5 82976786 82976842 -120108690 - L1PA15 LINE L1 -4929 1858 1803 389 193 11 0 chr5 82976848 82976936 -120108596 - L1PA15 LINE L1 -4850 1937 1849 4509 222 25 12 chr5 82976945 82978629 -120106903 - L1PA13 LINE L1 -3544 4040 2319 502 320 39 13 chr5 82979721 82980027 -120105505 - L1PA13 LINE L1 -7264 317 4 248 236 0 83 chr5 82980033 82980105 -120105427 - MLT1F LTR MaLR -406 161 96 21 0 0 0 chr5 82980203 82980224 -120105308 + AT_rich Low_complexity Low_complexity 1 21 0 2481 77 0 0 chr5 82980276 82980587 -120104945 - AluY SINE Alu 0 311 1 341 153 34 0 chr5 82981030 82981089 -120104443 - U7 snRNA snRNA -1 62 2 2257 125 0 3 chr5 82981190 82981503 -120104029 - AluSq SINE Alu -1 312 1 1275 174 154 4 chr5 82981927 82982186 -120103346 - AluJo SINE Alu 0 302 5 21 0 0 0 chr5 82982712 82982733 -120102799 + AT_rich Low_complexity Low_complexity 1 21 0 1545 181 31 0 chr5 82982770 82983030 -120102502 - AluJo SINE Alu -44 268 1 2187 92 3 46 chr5 82983433 82983759 -120101773 + AluSp SINE Alu 1 312 -1 262 253 27 0 chr5 82984726 82984801 -120100731 + CT-rich Low_complexity Low_complexity 2 78 0 341 300 0 0 chr5 82985038 82985128 -120100404 - L1MC4 LINE L1 -1339 6703 6614 2228 79 0 49 chr5 82985137 82985442 -120100090 - AluSg SINE Alu -20 290 1 414 0 0 0 chr5 82985442 82985488 -120100044 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 226 73 0 73 chr5 82985488 82985529 -120100003 - Alu SINE Alu -18 282 245 277 288 9 57 chr5 82985629 82985862 -120099670 - L2 LINE L2 -897 2417 2136 1571 196 6 22 chr5 82985948 82986265 -120099267 - AluJb SINE Alu 0 312 1 619 197 43 0 chr5 82986369 82986486 -120099046 + FLAM_A SINE Alu 1 122 -11 1952 141 18 0 chr5 82986493 82986770 -120098762 + AluSx SINE Alu 1 282 -30 261 0 0 0 chr5 82986770 82986799 -120098733 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 626 224 73 6 chr5 82987083 82987248 -120098284 - MER5B DNA MER1_type 0 178 3 345 313 39 28 chr5 82987523 82987705 -120097827 + MIR SINE MIR 22 207 -55 182 276 154 57 chr5 82987944 82988067 -120097465 + MIR SINE MIR 45 179 -83 2376 162 23 16 chr5 82988168 82988599 -120096933 - Tigger2a DNA MER2_type 0 434 1 2097 121 0 10 chr5 82988781 82989095 -120096437 - AluSx SINE Alu -1 311 1 33 25 0 0 chr5 82989370 82989410 -120096122 + AT_rich Low_complexity Low_complexity 1 40 0 959 257 84 65 chr5 82989508 82990060 -120095472 - L1MC4 LINE L1 -1853 5955 5388 1618 188 17 0 chr5 82990060 82990348 -120095184 - AluJo SINE Alu -17 295 3 959 257 84 65 chr5 82990348 82990413 -120095119 - L1MC4 LINE L1 -2420 5388 5326 345 230 56 6 chr5 82990583 82990744 -120094788 + (TA)n Simple_repeat Simple_repeat 2 170 0 428 172 139 130 chr5 82990759 82990844 -120094688 + L1MC4 LINE L1 7803 7886 -156 228 67 0 0 chr5 82990844 82990874 -120094658 + (TG)n Simple_repeat Simple_repeat 2 31 0 428 172 139 130 chr5 82990874 82991026 -120094506 + L1MC4 LINE L1 7886 8042 0 300 273 68 53 chr5 82991034 82991166 -120094366 + L1MC4 LINE L1 7759 7892 -150 226 281 0 11 chr5 82991174 82991263 -120094269 + L1ME4a LINE L1 5977 6064 -57 276 275 55 55 chr5 82991460 82991642 -120093890 - L1MC4 LINE L1 -1322 4824 4643 324 178 46 122 chr5 82991813 82992010 -120093522 - L1MC5 LINE L1 -21 7940 7759 2804 205 57 44 chr5 82992023 82992436 -120093096 + L1MC/D LINE L1 3402 3831 -2315 2144 119 0 0 chr5 82992436 82992722 -120092810 + AluSx SINE Alu 15 300 -12 2804 205 57 44 chr5 82992722 82993065 -120092467 + L1MC/D LINE L1 3831 4168 -1978 943 128 0 0 chr5 82993065 82993198 -120092334 + FLAM_C SINE Alu 1 133 0 2561 187 35 15 chr5 82993199 82993420 -120092112 + L1MC/D LINE L1 4965 5180 -1004 648 152 76 68 chr5 82993420 82993552 -120091980 + FLAM_C SINE Alu 1 133 0 2561 187 35 15 chr5 82993552 82994129 -120091403 + L1MC/D LINE L1 5180 5779 -405 710 284 23 6 chr5 82994364 82994540 -120090992 - MIR SINE MIR -81 181 3 312 304 87 22 chr5 82994886 82995024 -120090508 - MIR SINE MIR -70 192 46 318 169 31 0 chr5 82995680 82995745 -120089787 - L1ME LINE L1 -297 5824 5758 763 254 136 57 chr5 82995986 82996392 -120089140 - MLT1J LTR MaLR -65 446 9 24 32 0 0 chr5 82996576 82996607 -120088925 + AT_rich Low_complexity Low_complexity 1 31 0 3259 90 17 8 chr5 82996629 82997105 -120088427 - L1PA13 LINE L1 -3 6160 5681 3427 122 5 30 chr5 82997105 82997672 -120087860 - L1MC1 LINE L1 -4 6329 5776 1980 105 11 14 chr5 82997676 82997962 -120087570 - AluSq SINE Alu -16 297 13 276 137 0 0 chr5 82997967 82998018 -120087514 + L1MC/D LINE L1 5788 5838 -495 * 3717 174 15 22 chr5 82998015 82998906 -120086626 - L1MC1 LINE L1 -560 5773 4894 1891 173 0 3 chr5 82998906 82999212 -120086320 + AluJo SINE Alu 2 306 -6 3717 174 15 22 chr5 82999212 82999605 -120085927 - L1MC1 LINE L1 -1439 4894 4500 391 181 14 14 chr5 82999606 82999678 -120085854 - Tigger5 DNA MER2_type -1 2322 2251 274 163 0 0 chr5 82999647 82999690 -120085842 - Tigger5 DNA MER2_type -2268 55 13 * 351 151 27 27 chr5 82999690 82999763 -120085769 - Tigger5 DNA MER2_type 0 2323 2251 313 192 0 0 chr5 82999732 82999784 -120085748 - Tigger5 DNA MER2_type -2268 55 4 * 524 245 20 53 chr5 82999784 82999910 -120085622 - L1MC1 LINE L1 -1646 4500 4384 1808 172 3 0 chr5 82999910 83000213 -120085319 - AluSx SINE Alu -8 304 1 524 245 20 53 chr5 83000213 83000331 -120085201 - L1MC1 LINE L1 -1762 4384 4264 242 275 99 58 chr5 83000560 83000731 -120084801 - L1M4 LINE L1 -1215 4931 4754 1652 177 19 19 chr5 83001647 83001957 -120083575 - AluJo SINE Alu -2 310 1 632 289 128 0 chr5 83002188 83002406 -120083126 + MIR SINE MIR 6 251 -11 469 288 114 11 chr5 83002430 83002614 -120082918 - MIR SINE MIR -17 245 43 13126 87 6 4 chr5 83002642 83005250 -120080282 - L1PA7 LINE L1 -2 6152 3534 983 115 0 0 chr5 83005252 83005382 -120080150 - AluSp SINE Alu -183 130 1 14934 132 30 113 chr5 83005405 83008916 -120076616 - L1PA7 LINE L1 -2884 3262 41 191 258 214 0 chr5 83009874 83009963 -120075569 - L2 LINE L2 -239 3033 2926 249 284 0 0 chr5 83010350 83010417 -120075115 - MIR SINE MIR -13 249 183 233 256 64 13 chr5 83010453 83010531 -120075001 - MLT1J LTR MaLR -331 180 99 229 173 0 58 chr5 83010494 83010546 -120074986 - LTR67 LTR ERVL -418 139 91 * 330 87 0 0 chr5 83011307 83011353 -120074179 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 495 249 40 51 chr5 83011692 83011779 -120073753 - MIR SINE MIR -14 248 162 3523 137 19 0 chr5 83011779 83012296 -120073236 + MER1A DNA MER1_type 1 527 0 495 249 40 51 chr5 83012296 83012385 -120073147 - MIR SINE MIR -100 162 74 494 204 293 30 chr5 83012488 83012655 -120072877 + MER58A DNA MER1_type 11 221 -3 29 28 0 0 chr5 83013081 83013117 -120072415 + AT_rich Low_complexity Low_complexity 1 36 0 514 239 123 65 chr5 83013504 83013723 -120071809 - MLT1G1 LTR MaLR -5 590 295 254 227 61 15 chr5 83013810 83013876 -120071656 - MLT1G1 LTR MaLR -349 200 132 298 137 53 42 chr5 83014571 83014666 -120070866 + (CTATA)n Simple_repeat Simple_repeat 4 99 0 6312 32 3 5 chr5 83014890 83015643 -120069889 + L1PA4 LINE L1 5402 6152 -3 180 0 0 0 chr5 83015713 83015733 -120069799 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 1527 215 3 3 chr5 83017311 83017599 -120067933 - AluJo SINE Alu -22 290 3 316 98 0 0 chr5 83018040 83018081 -120067451 - Alu SINE Alu -12 290 250 2285 100 0 3 chr5 83020278 83020577 -120064955 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 83020931 83020955 -120064577 + AT_rich Low_complexity Low_complexity 1 24 0 2148 107 40 0 chr5 83021480 83021778 -120063754 - AluSx SINE Alu -2 310 1 993 201 5 5 chr5 83021885 83022079 -120063453 + AluJb SINE Alu 1 194 -118 204 125 0 0 chr5 83022092 83022124 -120063408 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 83022207 83022230 -120063302 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 83022242 83022274 -120063258 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr5 83022899 83022943 -120062589 + AT_rich Low_complexity Low_complexity 1 44 0 2222 101 0 13 chr5 83023791 83024099 -120061433 - AluY SINE Alu -7 304 1 2353 90 0 3 chr5 83024786 83025086 -120060446 + AluSx SINE Alu 1 299 -13 272 314 19 0 chr5 83026294 83026399 -120059133 - MER103 DNA DNA -59 107 1 1853 120 4 11 chr5 83026539 83026805 -120058727 + AluSp SINE Alu 33 296 -17 232 226 170 19 chr5 83027156 83027262 -120058270 - L2 LINE L2 -762 2552 2431 596 223 109 16 chr5 83027451 83027644 -120057888 - L2 LINE L2 0 3313 3103 545 264 45 57 chr5 83028324 83028570 -120056962 + L2 LINE L2 3067 3309 -4 25 31 0 0 chr5 83028780 83028812 -120056720 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 83029027 83029049 -120056483 + AT_rich Low_complexity Low_complexity 1 22 0 1743 143 18 14 chr5 83029759 83030067 -120055465 + AluSx SINE Alu 1 309 0 588 262 78 20 chr5 83030434 83030678 -120054854 + L1MC4a LINE L1 5254 5511 -2297 1139 200 88 11 chr5 83030710 83031127 -120054405 - MLT1D LTR MaLR -3 502 1 792 274 104 3 chr5 83031135 83031471 -120054061 + L1MC4a LINE L1 5572 5941 -1867 573 15 0 0 chr5 83031500 83031566 -120053966 + (CA)n Simple_repeat Simple_repeat 2 67 0 1222 58 0 0 chr5 83031574 83031728 -120053804 - AluY SINE Alu -8 303 150 843 219 0 0 chr5 83033174 83033366 -120052166 + L1MA4 LINE L1 6033 6224 -76 2895 195 61 17 chr5 83033545 83034187 -120051345 - L1MD3 LINE L1 -2 7993 7324 702 116 152 0 chr5 83034191 83034329 -120051203 - L1MB3 LINE L1 -15 6168 6010 2024 102 65 0 chr5 83034559 83034852 -120050680 + AluSx SINE Alu 1 312 0 1875 163 0 10 chr5 83034899 83035199 -120050333 + AluJb SINE Alu 1 297 -15 2008 116 32 0 chr5 83035263 83035548 -120049984 - AluSg SINE Alu -16 294 1 1633 178 35 3 chr5 83035697 83035983 -120049549 + AluJo SINE Alu 1 295 -17 395 198 0 25 chr5 83036248 83036329 -120049203 + Tigger5 DNA MER2_type 1 79 -2244 402 175 0 0 chr5 83036333 83036396 -120049136 - Tigger5 DNA MER2_type -9 2314 2252 327 278 0 0 chr5 83036392 83036464 -120049068 + Tigger5 DNA MER2_type 2252 2323 0 * 788 200 18 18 chr5 83036623 83036788 -120048744 - MER46C DNA MER2_type -21 317 153 337 154 0 0 chr5 83036839 83036891 -120048641 - MER46C DNA MER2_type -280 58 7 2260 102 20 3 chr5 83037097 83037402 -120048130 + AluSq SINE Alu 1 310 -3 3301 158 27 14 chr5 83037411 83038045 -120047487 + L1MC1 LINE L1 5692 6333 0 28 61 0 0 chr5 83039966 83040015 -120045517 + AT_rich Low_complexity Low_complexity 1 49 0 1741 134 21 41 chr5 83041088 83041378 -120044154 + AluSx SINE Alu 1 284 -28 25 31 0 0 chr5 83041508 83041540 -120043992 + AT_rich Low_complexity Low_complexity 1 32 0 532 271 139 11 chr5 83042200 83042575 -120042957 + L1ME3A LINE L1 5225 5646 -524 862 201 35 173 chr5 83042730 83043192 -120042340 + L1ME3A LINE L1 5694 6091 -79 2067 170 42 25 chr5 83043512 83044045 -120041487 + MLT2A2 LTR ERVL 1 554 0 1636 208 19 108 chr5 83044176 83044657 -120040875 - MER77 LTR ERV1 -165 440 3 427 283 76 21 chr5 83045635 83045780 -120039752 + MER63A DNA MER1_type 58 210 0 445 343 52 72 chr5 83045797 83046199 -120039333 + L2 LINE L2 2879 3272 0 1511 192 14 11 chr5 83046520 83046807 -120038725 - AluJo SINE Alu -24 288 1 357 24 0 0 chr5 83047242 83047284 -120038248 + (CA)n Simple_repeat Simple_repeat 2 43 0 373 169 169 0 chr5 83047716 83047805 -120037727 + MLT1J LTR MaLR 4 107 -404 621 299 63 41 chr5 83047875 83047961 -120037571 + L1MEd LINE L1 325 408 -5711 8205 53 9 0 chr5 83047961 83048918 -120036614 - LTR5 LTR ERVK -3 966 1 621 299 63 41 chr5 83048918 83049149 -120036383 + L1MEd LINE L1 408 649 -5470 660 247 102 81 chr5 83049247 83049310 -120036222 + MLT1J LTR MaLR 121 181 -330 2405 86 0 3 chr5 83049310 83049612 -120035920 + AluSx SINE Alu 1 301 -11 660 247 102 81 chr5 83049612 83049929 -120035603 + MLT1J LTR MaLR 181 509 -2 737 268 159 57 chr5 83050249 83050323 -120035209 - L2 LINE L2 -4 3309 3244 1780 179 0 3 chr5 83050323 83050620 -120034912 - AluJo SINE Alu -16 296 1 737 268 159 57 chr5 83050620 83051004 -120034528 - L2 LINE L2 -69 3244 2804 38 0 0 0 chr5 83051359 83051397 -120034135 + AT_rich Low_complexity Low_complexity 1 38 0 1173 176 45 0 chr5 83051397 83051596 -120033936 - AluJb SINE Alu -20 292 85 266 179 36 0 chr5 83052411 83052467 -120033065 - MER58A DNA MER1_type -28 79 22 268 311 91 0 chr5 83052574 83052706 -120032826 + MIR SINE MIR 106 249 -13 4023 67 8 8 chr5 83052957 83053463 -120032069 - SVA Other Other 0 1386 881 23 0 0 0 chr5 83053765 83053788 -120031744 + GC_rich Low_complexity Low_complexity 1 23 0 223 65 43 22 chr5 83054437 83054483 -120031049 + C-rich Low_complexity Low_complexity 3 49 0 428 168 147 32 chr5 83054490 83054585 -120030947 - FRAM SINE Alu -36 140 35 395 228 104 64 chr5 83054690 83054892 -120030640 - L2 LINE L2 0 3313 3104 353 293 163 0 chr5 83054898 83055021 -120030511 + MIR SINE MIR 34 176 -86 1488 264 152 48 chr5 83055030 83055883 -120029649 - L2 LINE L2 -1176 2138 1197 545 232 82 122 chr5 83055883 83055970 -120029562 - MLT1I LTR MaLR 0 409 320 826 161 8 23 chr5 83055970 83056100 -120029432 + FLAM_C SINE Alu 1 128 -5 545 232 82 122 chr5 83056100 83056180 -120029352 - MLT1I LTR MaLR -89 320 238 2505 196 76 4 chr5 83056180 83056664 -120028868 - LTR40a LTR ERVL 0 519 1 545 232 82 122 chr5 83056664 83056921 -120028611 - MLT1I LTR MaLR -171 238 1 511 312 29 23 chr5 83056921 83057094 -120028438 - L2 LINE L2 -2113 1201 1028 359 178 14 0 chr5 83057108 83057181 -120028351 + MSTD LTR MaLR 317 390 -6 1137 305 20 2 chr5 83057184 83057577 -120027955 - L2 LINE L2 -2281 1033 634 2367 137 51 5 chr5 83057603 83057794 -120027738 - MLT1B LTR MaLR 0 390 209 315 0 0 0 chr5 83057794 83057829 -120027703 + (TG)n Simple_repeat Simple_repeat 2 36 0 2367 137 51 5 chr5 83057829 83058010 -120027522 - MLT1B LTR MaLR -181 209 1 22 0 0 0 chr5 83059101 83059123 -120026409 + AT_rich Low_complexity Low_complexity 1 22 0 778 204 41 17 chr5 83059738 83059910 -120025622 + MER69 DNA AcHobo 1 176 -1050 265 250 18 0 chr5 83059914 83059970 -120025562 + MER69 DNA AcHobo 2466 2522 -4 215 264 11 22 chr5 83060068 83060159 -120025373 + (TG)n Simple_repeat Simple_repeat 2 91 0 218 158 12 61 chr5 83060231 83060313 -120025219 + A-rich Low_complexity Low_complexity 2 79 0 2231 96 0 0 chr5 83060865 83061171 -120024361 - AluSx SINE Alu 0 306 1 2874 103 45 7 chr5 83061216 83061643 -120023889 + MER65A LTR ERV1 1 443 -2 254 232 0 12 chr5 83061881 83061963 -120023569 + CT-rich Low_complexity Low_complexity 1 81 0 320 270 53 58 chr5 83063342 83063531 -120022001 - L1MDa LINE L1 -6190 350 163 29 0 0 0 chr5 83063588 83063617 -120021915 + AT_rich Low_complexity Low_complexity 1 29 0 514 196 47 0 chr5 83064352 83064368 -120021164 + MER5A DNA MER1_type 1 21 -168 280 241 267 17 chr5 83064368 83064484 -120021048 - MER5A DNA MER1_type -2 187 43 2061 113 49 0 chr5 83065206 83065490 -120020042 - AluSp SINE Alu -15 298 1 1318 151 9 23 chr5 83065762 83065980 -120019552 - MER20 DNA MER1_type -2 217 3 201 357 21 56 chr5 83066322 83066465 -120019067 - MIR SINE MIR -123 139 2 292 269 85 116 chr5 83066926 83067324 -120018208 - L1ME4a LINE L1 -161 5960 5575 228 191 21 0 chr5 83068650 83068697 -120016835 + L2 LINE L2 3225 3272 0 * 511 264 34 55 chr5 83068691 83068883 -120016649 - MIR SINE MIR -61 201 13 348 318 53 30 chr5 83069287 83069419 -120016113 + MIR SINE MIR 35 169 -93 312 197 14 14 chr5 83069620 83069691 -120015841 + MIR SINE MIR 173 243 -19 195 231 0 39 chr5 83069842 83069894 -120015638 - L2 LINE L2 0 3313 3264 1187 158 22 22 chr5 83070350 83070578 -120014954 + L1MB3 LINE L1 5956 6183 0 21 0 0 0 chr5 83071733 83071754 -120013778 + AT_rich Low_complexity Low_complexity 1 21 0 1816 145 0 11 chr5 83071824 83072106 -120013426 + AluJb SINE Alu 1 279 -33 886 287 105 29 chr5 83072828 83073208 -120012324 - MLT1K LTR MaLR 0 588 180 2216 137 0 3 chr5 83073994 83074307 -120011225 + AluSx SINE Alu 1 312 0 846 230 54 27 chr5 83074386 83074608 -120010924 - MLT1K LTR MaLR -27 561 334 373 171 92 13 chr5 83074640 83074716 -120010816 - MLT1K LTR MaLR -319 269 188 473 335 100 20 chr5 83074908 83075108 -120010424 + L2 LINE L2 3057 3272 0 2638 173 55 0 chr5 83075887 83076320 -120009212 + MSTB2 LTR MaLR 1 457 0 223 250 0 0 chr5 83076677 83076721 -120008811 + L2 LINE L2 3211 3254 -18 446 252 19 43 chr5 83077515 83077712 -120007820 - L1ME LINE L1 -439 5682 5491 189 175 0 0 chr5 83078216 83078256 -120007276 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 2201 101 20 0 chr5 83079135 83079441 -120006091 + AluSx SINE Alu 1 312 0 986 179 88 109 chr5 83079679 83080099 -120005433 - HsTC2 DNA Tc2 -15 1883 1297 611 146 18 27 chr5 83080155 83080265 -120005267 - MSTC LTR MaLR -319 109 1 229 255 223 6 chr5 83080621 83080778 -120004754 - Charlie7 DNA MER1_type -2 2610 2420 722 197 24 24 chr5 83080813 83080940 -120004592 - AluSq/x SINE Alu -185 127 1 497 307 51 9 chr5 83081007 83081222 -120004310 - L1ME LINE L1 -313 5808 5585 2262 122 0 0 chr5 83081341 83081652 -120003880 - AluSq SINE Alu -1 312 2 23 33 0 0 chr5 83082058 83082088 -120003444 + AT_rich Low_complexity Low_complexity 1 30 0 1721 199 3 3 chr5 83082198 83082500 -120003032 - AluJb SINE Alu -10 302 1 348 275 78 21 chr5 83082517 83082659 -120002873 + MIR SINE MIR 113 262 0 356 364 21 7 chr5 83083330 83083470 -120002062 - MIR SINE MIR -108 154 13 251 254 28 14 chr5 83083736 83083807 -120001725 - L1MC/D LINE L1 -1895 5913 5842 277 160 20 0 chr5 83083916 83083966 -120001566 + L1ME LINE L1 5532 5582 -539 263 278 23 58 chr5 83084064 83084237 -120001295 + L1ME LINE L1 5718 5884 -237 44002 32 21 1 chr5 83084392 83090455 -119995077 + L1PA2 LINE L1 3 6188 0 231 309 0 0 chr5 83091831 83091886 -119993646 + L2 LINE L2 3006 3060 -253 416 271 68 30 chr5 83092043 83092176 -119993356 + L2 LINE L2 3175 3312 -1 2157 180 55 55 chr5 83092259 83092764 -119992768 + MLT1D LTR MaLR 1 505 0 1401 240 110 36 chr5 83092898 83093452 -119992080 - MLT1G1 LTR MaLR 0 595 1 1114 206 52 12 chr5 83093926 83094174 -119991358 - MLT1A1 LTR MaLR 0 365 108 338 286 50 25 chr5 83094174 83094293 -119991239 - MLT1A1 LTR MaLR -458 137 16 613 137 10 10 chr5 83094375 83094477 -119991055 - MLT1A2 LTR MaLR -272 102 1 1700 168 30 20 chr5 83094609 83094907 -119990625 - AluJb SINE Alu -11 301 1 940 160 98 10 chr5 83094926 83095120 -119990412 - Tigger3(Golem) DNA MER2_type 0 3029 2819 472 191 90 0 chr5 83095114 83095203 -119990329 - Tigger3(Golem) DNA MER2_type -2932 97 1 * 421 253 29 34 chr5 83096436 83096594 -119988938 + MIR SINE MIR 13 177 -85 1238 202 5 0 chr5 83096652 83096870 -119988662 + AluJo SINE Alu 86 304 -8 440 287 81 95 chr5 83097694 83097990 -119987542 + L2 LINE L2 2980 3271 -1 35 41 0 0 chr5 83099489 83099538 -119985994 + AT_rich Low_complexity Low_complexity 1 49 0 2204 92 41 7 chr5 83099795 83100087 -119985445 + AluSg SINE Alu 1 302 -8 1569 191 54 0 chr5 83100098 83100376 -119985156 + AluJo SINE Alu 1 293 -19 25 0 0 0 chr5 83100376 83100401 -119985131 + AT_rich Low_complexity Low_complexity 1 25 0 226 315 231 0 chr5 83100464 83100572 -119984960 + MIR3 SINE MIR 69 201 -7 236 268 65 8 chr5 83100722 83100845 -119984687 - L1ME4a LINE L1 -36 6085 5956 1359 122 67 4 chr5 83100942 83101196 -119984336 - L1MB3 LINE L1 -3 6180 5911 462 263 15 0 chr5 83101197 83101330 -119984202 - L1ME4a LINE L1 -289 5832 5698 647 244 53 63 chr5 83101923 83102242 -119983290 - L1MC4a LINE L1 -1815 5993 5678 2812 129 20 0 chr5 83102267 83102708 -119982824 - L1MB2 LINE L1 -7 6164 5715 262 254 185 15 chr5 83102877 83103007 -119982525 - MIR SINE MIR -74 188 37 2273 114 0 0 chr5 83103287 83103595 -119981937 + AluSg SINE Alu 1 308 -2 242 235 0 0 chr5 83103991 83104042 -119981490 + L2 LINE L2 3262 3312 -1 243 0 0 0 chr5 83104069 83104096 -119981436 + (T)n Simple_repeat Simple_repeat 1 27 0 370 333 28 0 chr5 83104797 83104905 -119980627 + MER91A DNA MER1_type 73 183 -13 1014 242 57 15 chr5 83105086 83105350 -119980182 - MLT1J LTR MaLR -149 362 88 249 242 0 0 chr5 83105354 83105416 -119980116 - MIR SINE MIR -45 217 156 371 242 235 20 chr5 83110969 83111122 -119974410 + MER5A DNA MER1_type 4 189 0 3256 116 28 0 chr5 83112324 83112824 -119972708 + MER75 DNA T2_type 1 514 0 526 300 119 40 chr5 83112896 83113123 -119972409 + MIR SINE MIR 15 259 -3 369 311 31 37 chr5 83113566 83113727 -119971805 + MIR SINE MIR 49 208 -54 242 200 105 21 chr5 83113885 83113980 -119971552 + L1ME4a LINE L1 6009 6111 -10 224 287 176 0 chr5 83115376 83115484 -119970048 - MIR SINE MIR -100 162 36 2219 99 10 13 chr5 83115850 83116152 -119969380 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 83116170 83116195 -119969337 + AT_rich Low_complexity Low_complexity 1 25 0 26 82 0 0 chr5 83116379 83116440 -119969092 + AT_rich Low_complexity Low_complexity 1 61 0 1033 121 0 25 chr5 83118848 83119052 -119966480 + AluSq SINE Alu 131 330 0 296 191 0 15 chr5 83119094 83119162 -119966370 - L1MD1 LINE L1 -20 6222 6156 466 290 5 70 chr5 83119243 83119429 -119966103 - MIR SINE MIR -65 197 24 26 0 0 0 chr5 83119790 83119816 -119965716 + AT_rich Low_complexity Low_complexity 1 26 0 673 256 198 18 chr5 83120365 83120693 -119964839 - L1MD2 LINE L1 -13 6346 5960 22 0 0 0 chr5 83121202 83121224 -119964308 + AT_rich Low_complexity Low_complexity 1 22 0 769 225 172 52 chr5 83121619 83122161 -119963371 + HAL1 LINE L1 1872 2478 -29 500 285 66 0 chr5 83123316 83123453 -119962079 + MIR SINE MIR 1 146 -116 84 11 0 0 chr5 83123751 83123842 -119961690 + AT_rich Low_complexity Low_complexity 1 91 0 2212 116 3 7 chr5 83124675 83124985 -119960547 - AluSg SINE Alu -1 309 1 181 222 0 22 chr5 83125320 83125365 -119960167 - MER5B DNA MER1_type -21 157 114 2253 89 7 3 chr5 83125409 83125702 -119959830 - AluSg1 SINE Alu -15 294 1 21 0 0 0 chr5 83125871 83125892 -119959640 + AT_rich Low_complexity Low_complexity 1 21 0 1862 157 7 4 chr5 83125892 83126173 -119959359 - AluJo SINE Alu -30 282 1 2354 67 13 3 chr5 83126533 83126832 -119958700 - AluSq SINE Alu -11 302 1 2459 64 0 0 chr5 83127040 83127336 -119958196 - AluY SINE Alu -15 296 1 2363 75 7 0 chr5 83129207 83129499 -119956033 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 83130667 83130689 -119954843 + AT_rich Low_complexity Low_complexity 1 22 0 1956 137 27 0 chr5 83132055 83132348 -119953184 - AluSq SINE Alu -12 301 1 382 268 146 8 chr5 83132852 83132975 -119952557 - MIR SINE MIR -111 151 12 966 130 342 4 chr5 83133523 83133792 -119951740 + MER46B DNA MER2_type 2 236 0 387 199 58 6 chr5 83135150 83135306 -119950226 + (TA)n Simple_repeat Simple_repeat 1 164 0 781 218 45 0 chr5 83136194 83136350 -119949182 + FAM SINE Alu 2 164 -11 262 133 13 40 chr5 83136518 83136593 -119948939 - L1MA7 LINE L1 -1 6290 6218 192 111 0 0 chr5 83137825 83137861 -119947671 + (A)n Simple_repeat Simple_repeat 1 36 0 40570 33 23 4 chr5 83137863 83143924 -119941608 + L1PA3 LINE L1 1 6177 0 201 373 146 19 chr5 83144229 83144263 -119941269 + MER5A DNA MER1_type 9 37 -152 1829 69 0 12 chr5 83144263 83144510 -119941022 + L1PA8 LINE L1 5928 6171 -1 201 373 146 19 chr5 83144510 83144633 -119940899 + MER5A DNA MER1_type 37 186 -3 452 135 48 67 chr5 83145338 83145442 -119940090 - MIR SINE MIR -75 187 86 2360 90 3 0 chr5 83145514 83145815 -119939717 + AluSc SINE Alu 1 302 -7 2306 101 3 3 chr5 83146042 83146339 -119939193 + AluSg SINE Alu 1 297 -13 245 312 43 11 chr5 83146844 83146937 -119938595 - MIR3 SINE MIR -1 207 112 371 150 88 181 chr5 83146960 83147086 -119938446 - MER113 DNA MER1_type? -63 458 355 1840 133 39 32 chr5 83147086 83147395 -119938137 + AluJb SINE Alu 1 311 -1 371 150 88 181 chr5 83147395 83147461 -119938071 - MER113 DNA MER1_type? -166 355 284 304 222 40 30 chr5 83147460 83147559 -119937973 - MER113 DNA MER1_type? -421 100 1 * 1687 164 52 0 chr5 83148731 83149017 -119936515 - AluJo SINE Alu -11 301 1 188 189 0 75 chr5 83149761 83149814 -119935718 - MER5B DNA MER1_type -129 49 1 1524 171 67 19 chr5 83150246 83150515 -119935017 + AluJo SINE Alu 1 282 -30 2176 120 3 0 chr5 83150999 83151298 -119934234 - AluSg SINE Alu -10 300 1 28 29 0 0 chr5 83151628 83151663 -119933869 + AT_rich Low_complexity Low_complexity 1 35 0 664 143 19 0 chr5 83151663 83151768 -119933764 - U6 snRNA snRNA 0 107 1 653 233 102 25 chr5 83151999 83152235 -119933297 + MLT1J LTR MaLR 7 260 -251 1364 201 15 90 chr5 83152503 83152902 -119932630 + MLT1A2 LTR MaLR 2 370 -4 27 0 0 0 chr5 83153335 83153362 -119932170 + AT_rich Low_complexity Low_complexity 1 27 0 22 70 0 0 chr5 83153733 83153776 -119931756 + AT_rich Low_complexity Low_complexity 1 43 0 405 326 99 70 chr5 83155882 83156266 -119929266 - L2 LINE L2 -215 3057 2686 2142 103 14 7 chr5 83156266 83156556 -119928976 + AluSx SINE Alu 1 292 -20 405 326 99 70 chr5 83156556 83156909 -119928623 - L2 LINE L2 -586 2686 2309 282 270 36 72 chr5 83156909 83157020 -119928512 - MER91C DNA MER1_type -1 139 33 1567 136 91 53 chr5 83157158 83157199 -119928333 - THE1C LTR MaLR 0 375 337 2454 69 7 0 chr5 83157199 83157502 -119928030 + AluY SINE Alu 1 305 -6 1567 136 91 53 chr5 83157502 83157821 -119927711 - THE1C LTR MaLR -38 337 1 947 126 0 14 chr5 83159994 83160137 -119925395 + FLAM_C SINE Alu 1 141 -2 2451 61 0 0 chr5 83160183 83160478 -119925054 - AluSx SINE Alu -17 295 1 266 289 21 21 chr5 83160486 83160583 -119924949 - MER5A DNA MER1_type -86 103 7 2237 98 7 0 chr5 83160595 83160892 -119924640 + AluSx SINE Alu 1 299 -13 198 103 0 0 chr5 83161717 83161746 -119923786 + (GA)n Simple_repeat Simple_repeat 2 30 0 488 257 83 35 chr5 83161804 83161948 -119923584 - L2 LINE L2 0 3272 3122 406 232 0 0 chr5 83161967 83162049 -119923483 + MIR SINE MIR 72 153 -109 537 223 10 0 chr5 83162069 83162172 -119923360 - MIR SINE MIR -96 166 63 192 274 137 21 chr5 83162234 83162329 -119923203 - L2 LINE L2 -439 2875 2770 884 273 45 57 chr5 83162336 83162427 -119923105 - L2 LINE L2 -684 2630 2539 1121 161 95 104 chr5 83162427 83162774 -119922758 + MER2 DNA MER2_type 1 344 0 884 273 45 57 chr5 83162774 83163103 -119922429 - L2 LINE L2 -775 2539 2215 269 254 0 0 chr5 83163112 83163175 -119922357 + MLT1H LTR MaLR 12 74 -475 420 210 50 76 chr5 83163277 83163396 -119922136 + MLT1H LTR MaLR 238 353 -196 266 194 29 117 chr5 83163438 83163541 -119921991 + MLT1H LTR MaLR 456 549 0 651 271 0 0 chr5 83163548 83163725 -119921807 - L2 LINE L2 -1104 2210 2034 254 317 24 24 chr5 83164050 83164173 -119921359 + MIR SINE MIR 39 161 -101 244 239 159 0 chr5 83164302 83164390 -119921142 + MLT1J1 LTR MaLR 56 157 -289 29 0 0 0 chr5 83164801 83164830 -119920702 + AT_rich Low_complexity Low_complexity 1 29 0 2047 124 45 3 chr5 83165264 83165594 -119919938 - L1PA16 LINE L1 -9 6157 5814 714 162 0 8 chr5 83165594 83165711 -119919821 - FLAM_C SINE Alu -21 122 7 1254 132 0 0 chr5 83165712 83165909 -119919623 - L1PA16 LINE L1 -332 5834 5638 2996 96 72 20 chr5 83167585 83168073 -119917459 - LTR26B LTR ERV1 -16 515 3 21 0 0 0 chr5 83168084 83168105 -119917427 + AT_rich Low_complexity Low_complexity 1 21 0 7189 89 10 3 chr5 83168105 83169279 -119916253 - L1MA1 LINE L1 0 6302 5119 21 57 0 0 chr5 83169593 83169628 -119915904 + AT_rich Low_complexity Low_complexity 1 35 0 2694 101 21 2 chr5 83170043 83170469 -119915063 - LTR56 LTR ERV1 -2 443 10 660 262 14 0 chr5 83170475 83170620 -119914912 - MER5A DNA MER1_type -32 157 11 2142 169 29 5 chr5 83171054 83171438 -119914094 - MSTD LTR MaLR -3 393 1 1083 193 62 73 chr5 83171711 83171723 -119913809 - MLT2B1 LTR ERVL -48 366 355 258 32 0 0 chr5 83171723 83171754 -119913778 + (TG)n Simple_repeat Simple_repeat 2 32 0 1083 193 62 73 chr5 83171754 83172118 -119913414 - MLT2B1 LTR ERVL -59 355 1 2061 121 3 10 chr5 83172964 83173262 -119912270 + AluSx SINE Alu 7 302 -10 2164 4 0 0 chr5 83173296 83173529 -119912003 + AluYa5 SINE Alu 71 303 -8 288 213 12 50 chr5 83173582 83173662 -119911870 + MLT1J1 LTR MaLR 363 439 -7 2048 108 14 0 chr5 83173919 83174197 -119911335 - AluSx SINE Alu -20 292 11 1846 108 42 8 chr5 83174197 83174456 -119911076 - AluSx SINE Alu -44 268 1 2415 74 3 0 chr5 83174810 83175109 -119910423 + AluY SINE Alu 1 300 -11 1785 138 6 66 chr5 83175483 83175801 -119909731 + AluJb SINE Alu 5 303 -9 1846 156 60 9 chr5 83175897 83176244 -119909288 - MLT1A1 LTR MaLR 0 365 1 925 315 35 56 chr5 83178298 83178818 -119906714 + LTR67 LTR ERVL 1 509 -48 411 270 104 52 chr5 83179309 83179635 -119905897 + MLT1K LTR MaLR 131 473 -115 839 163 0 0 chr5 83179746 83179875 -119905657 - FLAM_C SINE Alu -2 131 3 389 228 185 58 chr5 83179960 83180219 -119905313 - L1ME4a LINE L1 0 6121 5830 312 262 0 24 chr5 83180783 83180832 -119904700 + (TG)n Simple_repeat Simple_repeat 1 49 -33 1522 178 52 54 chr5 83180832 83181181 -119904351 - MER7A DNA MER2_type 0 346 1 312 262 0 24 chr5 83181181 83181215 -119904317 + (TG)n Simple_repeat Simple_repeat 49 82 0 3131 233 108 124 chr5 83181667 83182171 -119903361 - L2 LINE L2 -1 3312 2801 2257 128 0 0 chr5 83182171 83182483 -119903049 + AluSx SINE Alu 1 312 0 3131 233 108 124 chr5 83182483 83183669 -119901863 - L2 LINE L2 -512 2801 1597 1942 35 51 28 chr5 83183669 83183924 -119901608 - AluY SINE Alu -16 295 35 2154 104 24 3 chr5 83183932 83184230 -119901302 - AluSc SINE Alu -5 304 1 3131 233 108 124 chr5 83184230 83185031 -119900501 - L2 LINE L2 -1723 1590 844 1594 218 33 52 chr5 83185104 83185289 -119900243 - L1ME2 LINE L1 -10 6154 5967 2223 120 3 0 chr5 83185289 83185597 -119899935 - AluSx SINE Alu -3 309 1 1594 218 33 52 chr5 83185597 83185952 -119899580 - L1ME2 LINE L1 -197 5967 5624 2076 146 13 0 chr5 83187216 83187517 -119898015 + AluSx SINE Alu 1 305 -7 586 248 99 5 chr5 83188257 83188459 -119897073 - LTR16C LTR ERVL -18 473 253 189 107 0 0 chr5 83189218 83189246 -119896286 + (TG)n Simple_repeat Simple_repeat 1 28 0 288 227 15 0 chr5 83189665 83189731 -119895801 + MLT1K LTR MaLR 522 588 0 2142 131 0 3 chr5 83189898 83190195 -119895337 + AluSx SINE Alu 1 296 -16 1974 201 40 100 chr5 83190207 83190633 -119894899 - Charlie1a DNA MER1_type -2148 613 163 2214 128 0 0 chr5 83190633 83190937 -119894595 + AluSx SINE Alu 1 304 -8 1974 201 40 100 chr5 83190937 83191045 -119894487 - Charlie1a DNA MER1_type -2598 163 122 2296 141 80 5 chr5 83191045 83191443 -119894089 + MSTA LTR MaLR 1 428 0 1974 201 40 100 chr5 83191443 83191558 -119893974 - Charlie1a DNA MER1_type -2639 122 2 1302 277 21 57 chr5 83191576 83192128 -119893404 - L2 LINE L2 0 3313 2783 975 177 0 0 chr5 83192173 83192331 -119893201 + FRAM SINE Alu 1 155 -21 276 100 0 0 chr5 83192331 83192371 -119893161 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 548 264 170 0 chr5 83192427 83192586 -119892946 - L2 LINE L2 -707 2607 2422 3368 214 73 31 chr5 83192595 83192879 -119892653 + L1MD2 LINE L1 4975 5246 -1113 402 74 0 0 chr5 83192879 83192933 -119892599 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 3368 214 73 31 chr5 83192933 83193967 -119891565 + L1MD2 LINE L1 5246 6344 -15 771 294 156 4 chr5 83193969 83194238 -119891294 - L2 LINE L2 -885 2429 2120 297 0 0 0 chr5 83194339 83194372 -119891160 + (TG)n Simple_repeat Simple_repeat 2 34 0 203 167 0 0 chr5 83194530 83194566 -119890966 + (CAT)n Simple_repeat Simple_repeat 1 36 0 604 284 106 12 chr5 83196196 83196619 -119888913 + L1M4 LINE L1 2972 3434 -2712 330 286 78 19 chr5 83196672 83196826 -119888706 - L1M4 LINE L1 -801 5345 5183 228 313 61 26 chr5 83197364 83197479 -119888053 + MIR SINE MIR 112 230 -32 26 0 0 0 chr5 83197549 83197575 -119887957 + AT_rich Low_complexity Low_complexity 1 26 0 349 358 126 18 chr5 83197596 83198105 -119887427 - L1M4 LINE L1 -1603 4543 3980 21 36 0 0 chr5 83198716 83198744 -119886788 + AT_rich Low_complexity Low_complexity 1 28 0 237 231 26 34 chr5 83198876 83198993 -119886539 + (TA)n Simple_repeat Simple_repeat 2 117 0 2284 110 0 0 chr5 83200939 83201249 -119884283 + AluSx SINE Alu 1 310 -2 372 257 114 9 chr5 83201895 83202000 -119883532 - MIR SINE MIR -77 131 16 7187 48 4 0 chr5 83202239 83203210 -119882322 - L1PA6 LINE L1 -11 6143 5171 22 56 0 0 chr5 83203759 83203795 -119881737 + AT_rich Low_complexity Low_complexity 1 36 0 3058 191 133 24 chr5 83204042 83204840 -119880692 + Charlie2a DNA MER1_type 1477 2413 -449 5981 69 97 2 chr5 83204840 83206293 -119879239 - L1PA10 LINE L1 0 6168 4712 3058 191 133 24 chr5 83206293 83206522 -119879010 + Charlie2a DNA MER1_type 2413 2616 -246 201 94 0 0 chr5 83206532 83206564 -119878968 + (TTA)n Simple_repeat Simple_repeat 2 33 0 13672 208 13 36 chr5 83206566 83208163 -119877369 - L1PB1 LINE L1 -12 6139 4507 2034 138 39 33 chr5 83208163 83208525 -119877007 + THE1B LTR MaLR 1 364 0 13672 208 13 36 chr5 83208525 83211688 -119873844 - L1PB1 LINE L1 -1644 4507 1453 342 0 0 0 chr5 83211688 83211726 -119873806 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 40448 40 13 1 chr5 83211726 83217511 -119868021 - L1PA3 LINE L1 -10 6145 298 414 235 35 0 chr5 83218376 83218461 -119867071 + MLT1J LTR MaLR 1 88 -423 283 262 0 24 chr5 83218803 83218887 -119866645 - L1ME4a LINE L1 -87 6034 5953 21 100 0 0 chr5 83218930 83219000 -119866532 + AT_rich Low_complexity Low_complexity 1 70 0 716 247 25 0 chr5 83219000 83219162 -119866370 - MIR SINE MIR 0 262 97 254 286 0 0 chr5 83219165 83219228 -119866304 + L2 LINE L2 3246 3308 -5 269 278 14 0 chr5 83219246 83219318 -119866214 - MIR SINE MIR -189 73 1 2261 102 0 0 chr5 83219414 83219707 -119865825 - AluSx SINE Alu -19 293 1 733 264 77 23 chr5 83220006 83220267 -119865265 - MLT1J LTR MaLR -236 275 1 2331 197 104 43 chr5 83220969 83222031 -119863501 - MER69 DNA AcHobo 0 2526 120 256 268 99 0 chr5 83222066 83222137 -119863395 - LTR16A LTR ERVL -5 445 368 996 144 72 56 chr5 83222175 83222427 -119863105 - L1MA8 LINE L1 -4 6308 6047 2254 110 0 0 chr5 83222440 83222748 -119862784 - AluSg SINE Alu -2 308 1 1062 141 55 37 chr5 83222773 83223079 -119862453 - LTR54B LTR ERV1 -45 453 119 1434 119 71 51 chr5 83223079 83223373 -119862159 - L1M1 LINE L1 -4062 3503 3204 13895 95 11 1 chr5 83223373 83226154 -119859378 + L1PA7 LINE L1 3363 6154 0 2430 126 8 0 chr5 83226154 83226526 -119859006 + L1PB2 LINE L1 5769 6151 0 14636 176 20 10 chr5 83226527 83230252 -119855280 + L1MA3 LINE L1 2209 5977 -328 2159 152 16 13 chr5 83230252 83230626 -119854906 + THE1C LTR MaLR 1 375 0 4292 126 6 50 chr5 83230626 83231354 -119854178 + THE1C-int LTR MaLR 1 696 -884 2201 115 17 0 chr5 83231360 83231708 -119853824 + L1MA3 LINE L1 5951 6304 -1 21 0 0 0 chr5 83231738 83231759 -119853773 + AT_rich Low_complexity Low_complexity 1 21 0 8156 135 16 5 chr5 83231827 83233796 -119851736 - L1PA13 LINE L1 -273 5901 3929 408 74 0 0 chr5 83233796 83233850 -119851682 - MLT2A1 LTR ERVL 0 444 391 307 286 0 22 chr5 83233853 83233944 -119851588 + L1MC4 LINE L1 6614 6702 -1340 1852 119 29 7 chr5 83233945 83234222 -119851310 - MLT2A1 LTR ERVL -42 402 120 429 20 0 0 chr5 83234246 83234296 -119851236 + (CA)n Simple_repeat Simple_repeat 1 50 0 260 299 11 23 chr5 83234296 83234383 -119851149 + MLT1J LTR MaLR 110 195 -316 27 0 0 0 chr5 83234449 83234476 -119851056 + AT_rich Low_complexity Low_complexity 1 27 0 42798 51 1 2 chr5 83234478 83240619 -119844913 - L1PA4 LINE L1 -9 6146 7 11043 107 5 2 chr5 83240618 83242181 -119843351 - L1P LINE L1 -4579 1567 1 * 240 59 0 0 chr5 83242247 83242281 -119843251 + (TG)n Simple_repeat Simple_repeat 1 34 0 891 188 94 5 chr5 83243165 83243357 -119842175 + MER58A DNA MER1_type 1 209 -15 3108 142 15 13 chr5 83244157 83244585 -119840947 + L1P LINE L1 3499 3930 -2216 3044 103 23 5 chr5 83244585 83245021 -119840511 + MLT2A1 LTR ERVL 1 444 0 3108 142 15 13 chr5 83245021 83245128 -119840404 + L1P LINE L1 3930 4035 -2111 1682 214 60 38 chr5 83246692 83247160 -119838372 + MLT1D LTR MaLR 1 538 -29 2325 110 0 10 chr5 83249342 83249651 -119835881 - AluSx SINE Alu -6 306 1 594 246 24 12 chr5 83249997 83250164 -119835368 - LTR16A LTR ERVL -26 424 256 465 296 8 23 chr5 83250219 83250351 -119835181 - MIR SINE MIR -85 177 48 1964 103 3 31 chr5 83250475 83250796 -119834736 - L1PB1 LINE L1 0 6151 5840 442 273 86 49 chr5 83251282 83251586 -119833946 + L1MC4a LINE L1 5615 5929 -1879 4820 180 40 38 chr5 83252770 83253294 -119832238 - Tigger6a DNA MER2_type -514 1083 561 1536 198 40 0 chr5 83253294 83253414 -119832118 + AluJb SINE Alu 1 115 -202 180 0 0 0 chr5 83253414 83253434 -119832098 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1536 198 40 0 chr5 83253434 83253619 -119831913 + AluJb SINE Alu 115 317 0 4820 180 40 38 chr5 83253619 83254173 -119831359 - Tigger6a DNA MER2_type -1036 561 1 1891 236 39 2 chr5 83254173 83254660 -119830872 + L1ME3A LINE L1 5643 6147 -23 1616 163 21 70 chr5 83255054 83255440 -119830092 - MLT1A2 LTR MaLR -7 367 1 229 288 80 24 chr5 83255440 83255565 -119829967 - HAL1 LINE L1 -217 2290 2159 467 333 66 56 chr5 83255612 83256038 -119829494 + L2 LINE L2 2842 3271 -1 1201 163 0 96 chr5 83256042 83256281 -119829251 + AluJb SINE Alu 87 302 -10 981 128 30 59 chr5 83257475 83257678 -119827854 + MER21A LTR ERV1 1 197 -734 * 1472 154 13 121 chr5 83257670 83258329 -119827203 + MER39 LTR ERV1 179 700 -199 460 290 82 25 chr5 83258323 83258568 -119826964 + MLT1J LTR MaLR 253 511 0 * 626 221 8 15 chr5 83258809 83258940 -119826592 + FLAM_A SINE Alu 1 130 -3 311 267 67 19 chr5 83259701 83259807 -119825725 + MIR3 SINE MIR 78 189 -19 970 163 0 13 chr5 83260085 83260238 -119825294 - FRAM SINE Alu -23 153 3 241 233 17 0 chr5 83260537 83260597 -119824935 + L1ME LINE L1 48 108 -5962 531 265 5 5 chr5 83261101 83261290 -119824242 + L1ME LINE L1 699 887 -5183 1863 163 16 23 chr5 83261370 83261677 -119823855 - AluJb SINE Alu -7 305 1 1785 239 64 5 chr5 83261677 83262304 -119823228 + L1ME LINE L1 2610 3273 -2807 1297 230 3 15 chr5 83262301 83262636 -119822896 - L1M4 LINE L1 -1169 4977 4647 * 796 254 91 18 chr5 83262637 83262968 -119822564 + L1ME1 LINE L1 5788 6142 -24 1422 277 69 60 chr5 83264407 83264979 -119820553 - L2 LINE L2 0 3313 2748 2325 151 67 5 chr5 83264979 83265382 -119820150 + MSTA LTR MaLR 1 428 0 1422 277 69 60 chr5 83265382 83265523 -119820009 - L2 LINE L2 -565 2748 2610 1798 177 33 28 chr5 83265523 83265885 -119819647 + THE1B LTR MaLR 1 364 0 1422 277 69 60 chr5 83265885 83266124 -119819408 - L2 LINE L2 -703 2610 2357 185 77 0 103 chr5 83266139 83266178 -119819354 - L2 LINE L2 -1157 2157 2123 683 287 107 14 chr5 83266493 83266922 -119818610 - MARNA DNA Mariner -21 565 97 180 279 33 33 chr5 83267022 83267083 -119818449 - MIR SINE MIR -129 79 19 673 290 14 28 chr5 83267783 83268000 -119817532 + ERVL LTR ERVL 4343 4556 -1208 463 38 0 75 chr5 83268306 83268386 -119817146 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2369 144 32 2 chr5 83268487 83268896 -119816636 + MSTB LTR MaLR 6 426 0 359 272 40 79 chr5 83268898 83269023 -119816509 + L2 LINE L2 2201 2317 -997 2123 159 72 5 chr5 83269023 83269426 -119816106 - MSTB1 LTR MaLR 0 432 3 359 272 40 79 chr5 83269426 83269502 -119816030 + L2 LINE L2 2317 2394 -920 876 285 68 82 chr5 83269596 83270024 -119815508 + LTR16C LTR ERVL 70 491 0 509 63 0 0 chr5 83270411 83270477 -119815055 - L1PA3 LINE L1 -2130 4016 3948 11562 28 0 0 chr5 83270477 83272605 -119812927 + L1PA3 LINE L1 4023 6150 -5 509 63 0 0 chr5 83272605 83272616 -119812916 - L1P LINE L1 -2197 3949 3939 1635 351 40 20 chr5 83273024 83274087 -119811445 + ERVL LTR ERVL 2064 3148 -2616 440 303 7 7 chr5 83274159 83274304 -119811228 + ERVL LTR ERVL 3280 3424 -2340 561 144 10 0 chr5 83274304 83274408 -119811124 + MLT2B1 LTR ERVL 1 105 -415 272 259 25 25 chr5 83275514 83275595 -119809937 - MER5B DNA MER1_type -89 89 9 1212 129 0 211 chr5 83276365 83276805 -119808727 + MER7A DNA MER2_type 1 345 -1 2028 178 26 5 chr5 83277045 83277472 -119808060 - Zaphod DNA AcHobo -1 4030 3595 * 2381 237 107 21 chr5 83277470 83278378 -119807154 - Zaphod DNA AcHobo -3041 990 5 401 254 148 32 chr5 83278430 83278619 -119806913 - MLT1K LTR MaLR -1 587 377 475 312 80 33 chr5 83278653 83278954 -119806578 - MLT1K LTR MaLR -254 334 20 16308 88 7 0 chr5 83279754 83279907 -119805625 + L1PA7 LINE L1 2929 3079 -3075 4545 26 4 2 chr5 83279907 83280408 -119805124 + SVA Other Other 885 1386 0 16308 88 7 0 chr5 83280408 83283444 -119802088 + L1PA7 LINE L1 3079 6139 -15 265 143 20 31 chr5 83283444 83283542 -119801990 + (TA)n Simple_repeat Simple_repeat 1 97 0 2181 114 0 10 chr5 83283734 83284031 -119801501 + AluSx SINE Alu 1 294 -18 4752 112 32 11 chr5 83285149 83285937 -119799595 + L1PA16 LINE L1 5362 6165 -1 714 257 17 38 chr5 83287219 83287456 -119798076 - ERVL LTR ERVL -1202 4562 4331 372 289 109 38 chr5 83287989 83288328 -119797204 - L1ME LINE L1 -393 5771 5409 493 307 42 18 chr5 83288329 83288495 -119797037 - MIR SINE MIR -88 174 5 2202 115 3 0 chr5 83288977 83289273 -119796259 - AluSx SINE Alu -15 297 1 182 301 0 65 chr5 83289771 83289864 -119795668 + L2 LINE L2 3185 3271 -1 314 308 186 4 chr5 83290109 83290362 -119795170 + L1M4 LINE L1 4493 4791 -1355 2169 201 38 0 chr5 83290363 83290961 -119794571 - L1ME LINE L1 -386 6573 5955 * 5384 94 20 17 chr5 83290958 83291798 -119793734 - L1P LINE L1 -1409 4737 3895 3427 128 9 0 chr5 83293476 83294040 -119791492 - L1P LINE L1 -2259 3887 3319 6339 92 17 0 chr5 83294042 83295404 -119790128 + L1PA10 LINE L1 4788 6164 -4 394 275 56 0 chr5 83295406 83295566 -119789966 - L1ME LINE L1 -974 5967 5799 * 2198 233 124 35 chr5 83295565 83296609 -119788923 - L1MEc LINE L1 -3113 3828 2756 739 281 129 59 chr5 83296616 83297121 -119788411 - L1MEc LINE L1 -5827 596 57 614 291 158 0 chr5 83297187 83297472 -119788060 - LTR33A LTR ERVL -92 431 102 491 232 88 48 chr5 83297600 83297859 -119787673 - HAL1 LINE L1 -153 2354 2087 1715 186 0 30 chr5 83297871 83298166 -119787366 + AluJb SINE Alu 1 286 -26 4321 160 44 16 chr5 83298176 83298995 -119786537 - L1MB2 LINE L1 -4 6167 5326 3037 199 31 16 chr5 83299000 83299705 -119785827 - L1MB2 LINE L1 -1512 4634 3919 801 275 121 20 chr5 83299724 83300070 -119785462 - HAL1 LINE L1 -436 2071 1691 438 187 66 0 chr5 83300067 83300169 -119785363 - L1MCa LINE L1 -894 1893 1560 * 3023 129 51 2 chr5 83300169 83300641 -119784891 - LTR69 LTR ERVL -80 508 14 7333 32 0 0 chr5 83300660 83301909 -119783623 - L1PA4 LINE L1 -1 6154 4909 2072 44 66 0 chr5 83301909 83302178 -119783354 - L1PA4 LINE L1 -4 6151 5862 1184 194 80 38 chr5 83302227 83302700 -119782832 - HAL1 LINE L1 -1035 1472 980 25 0 0 0 chr5 83302763 83302788 -119782744 + AT_rich Low_complexity Low_complexity 1 25 0 1960 147 89 31 chr5 83302788 83303242 -119782290 - L1MA8 LINE L1 -5 6286 5804 365 281 72 88 chr5 83303232 83303605 -119781927 - HAL1 LINE L1 -2097 410 44 * 28 29 0 0 chr5 83303642 83303677 -119781855 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 83303745 83303770 -119781762 + AT_rich Low_complexity Low_complexity 1 25 0 239 198 85 75 chr5 83304286 83304392 -119781140 + L1ME4a LINE L1 5994 6100 -21 1034 260 113 36 chr5 83304663 83305183 -119780349 + MLT1G LTR MaLR 26 585 -5 1550 221 199 16 chr5 83305203 83305700 -119779832 - MLT1G LTR MaLR -2 588 1 306 0 0 0 chr5 83306573 83306607 -119778925 + (TG)n Simple_repeat Simple_repeat 1 34 0 829 130 8 0 chr5 83306607 83306730 -119778802 - AluSg/x SINE Alu -33 277 154 846 208 12 6 chr5 83306783 83306956 -119778576 + AluJb SINE Alu 137 310 -2 315 104 0 0 chr5 83307188 83307236 -119778296 + (TTCC)n Simple_repeat Simple_repeat 2 49 0 601 288 57 26 chr5 83309470 83309699 -119775833 + MIR SINE MIR 1 236 -26 334 209 198 0 chr5 83309795 83309881 -119775651 + L2 LINE L2 3211 3313 0 2849 121 18 29 chr5 83311240 83311281 -119774251 - MER83 LTR ERV1 0 448 408 502 45 0 0 chr5 83311281 83311348 -119774184 + L1PA5 LINE L1 6085 6151 -3 2849 121 18 29 chr5 83311348 83311759 -119773773 - MER83 LTR ERV1 -40 408 1 2130 72 0 72 chr5 83312345 83312663 -119772869 - AluY SINE Alu -16 295 1 2030 65 0 4 chr5 83312758 83313019 -119772513 + L1PA7 LINE L1 5887 6146 -8 560 323 31 31 chr5 83313075 83313351 -119772181 + L1MEc LINE L1 1429 1707 -4689 1630 68 0 5 chr5 83313351 83313556 -119771976 + AluY SINE Alu 108 311 0 560 323 31 31 chr5 83313556 83313669 -119771863 + L1MEc LINE L1 1706 1818 -4578 376 248 131 10 chr5 83313726 83313924 -119771608 + L1MEc LINE L1 1919 2140 -4256 2480 57 0 0 chr5 83313975 83314275 -119771257 + AluY SINE Alu 1 300 -11 348 59 0 0 chr5 83314277 83314328 -119771204 + Alu SINE Alu 250 300 0 600 175 88 52 chr5 83314355 83314549 -119770983 + MER69 DNA AcHobo 2179 2379 -147 21 0 0 0 chr5 83314581 83314602 -119770930 + AT_rich Low_complexity Low_complexity 1 21 0 1829 233 210 14 chr5 83314604 83316134 -119769398 - L1ME1 LINE L1 -31 6135 4226 1182 124 15 30 chr5 83316146 83316347 -119769185 + Tigger1 DNA MER2_type 34 231 -2187 11450 149 20 10 chr5 83316360 83317656 -119767876 - L1MA2 LINE L1 -1 6303 5021 2463 66 0 3 chr5 83317656 83317957 -119767575 - AluY SINE Alu -11 300 1 11450 149 20 10 chr5 83317957 83319843 -119765689 - L1MA2 LINE L1 -1283 5021 3088 504 139 0 0 chr5 83320133 83320219 -119765313 + L1 LINE L1 4125 4210 -1936 542 142 35 0 chr5 83320223 83320336 -119765196 + LTR14C LTR ERVK 1 117 -470 363 293 62 34 chr5 83320342 83320550 -119764982 - L1ME1 LINE L1 -2841 3305 3092 3708 75 2 2 chr5 83320650 83321129 -119764403 + LTR14C LTR ERVK 109 587 0 6094 151 65 30 chr5 83321132 83321333 -119764199 + L1PA16 LINE L1 4213 4405 -1761 362 0 0 0 chr5 83321333 83321375 -119764157 + MADE1 DNA Mariner 1 42 -38 6094 151 65 30 chr5 83321375 83322999 -119762533 + L1PA16 LINE L1 4405 6156 -10 1087 193 86 39 chr5 83324114 83324243 -119761289 + MER63B DNA MER1_type 11 133 -929 761 111 8 0 chr5 83324243 83324360 -119761172 + L1PB2 LINE L1 6034 6151 0 1087 193 86 39 chr5 83324360 83324510 -119761022 + MER63B DNA MER1_type 133 303 -133 23 33 0 0 chr5 83325261 83325291 -119760241 + AT_rich Low_complexity Low_complexity 1 30 0 420 20 0 0 chr5 83325330 83325379 -119760153 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 302 364 49 23 chr5 83325405 83325710 -119759822 + MERVL LTR ERVL 397 709 -4287 1573 308 70 24 chr5 83325730 83327011 -119758521 + MERVL LTR ERVL 2883 4209 -1297 454 350 26 10 chr5 83327372 83327566 -119757966 - MIR SINE MIR -17 245 49 573 312 104 46 chr5 83328870 83329197 -119756335 - L2 LINE L2 0 3272 2927 473 200 211 5 chr5 83329494 83329684 -119755848 + MER110 LTR ERV1 38 266 -225 11167 131 17 50 chr5 83329970 83331899 -119753633 + L1M1 LINE L1 992 2855 -4710 630 299 80 33 chr5 83331893 83332317 -119753215 + L1ME LINE L1 3614 4057 -2089 * 23 0 0 0 chr5 83332419 83332442 -119753090 + AT_rich Low_complexity Low_complexity 1 23 0 233 217 0 14 chr5 83332533 83332542 -119752990 + (TA)n Simple_repeat Simple_repeat 2 10 -59 2146 106 0 0 chr5 83332542 83332824 -119752708 + AluSc SINE Alu 1 282 -27 233 217 0 14 chr5 83332824 83332883 -119752649 + (TA)n Simple_repeat Simple_repeat 10 69 0 644 58 12 0 chr5 83332891 83332977 -119752555 - L1PA3 LINE L1 -5 6150 6064 43 35 0 0 chr5 83332982 83333039 -119752493 + AT_rich Low_complexity Low_complexity 1 57 0 289 100 17 17 chr5 83333060 83333120 -119752412 + (TA)n Simple_repeat Simple_repeat 2 61 0 285 285 64 34 chr5 83333128 83333426 -119752106 + L1ME LINE L1 4343 4649 -1497 301 346 45 39 chr5 83333490 83333777 -119751755 + L1ME LINE L1 4748 5039 -1107 1265 45 0 0 chr5 83333777 83333933 -119751599 + L1PA4 LINE L1 5997 6152 -3 301 346 45 39 chr5 83333933 83333954 -119751578 + L1ME LINE L1 5039 5058 -1088 283 302 72 23 chr5 83334252 83334682 -119750850 + L1ME LINE L1 5290 5738 -383 11113 171 10 2 chr5 83334717 83336061 -119749471 + L1PA14 LINE L1 3283 4615 -1546 207 69 0 0 chr5 83336061 83336090 -119749442 + (CAA)n Simple_repeat Simple_repeat 1 29 0 11113 171 10 2 chr5 83336090 83337598 -119747934 + L1PA14 LINE L1 4615 6158 -3 2542 221 77 26 chr5 83337616 83338699 -119746833 + L1MEc LINE L1 1868 2973 -3242 502 92 0 0 chr5 83338744 83338809 -119746723 + MSTB LTR MaLR 1 65 -361 378 115 0 0 chr5 83338809 83338870 -119746662 - L1P4 LINE L1 -628 5533 5473 326 195 0 0 chr5 83338867 83338944 -119746588 + L1MEc LINE L1 2973 3049 -3166 * 675 185 14 0 chr5 83338971 83339117 -119746415 + L1MB7 LINE L1 6030 6177 -7 291 338 79 7 chr5 83339229 83339368 -119746164 - MIR SINE MIR -3 259 111 2342 123 58 18 chr5 83339825 83340223 -119745309 - MSTB LTR MaLR -12 414 1 8684 174 31 9 chr5 83340223 83341838 -119743694 - MSTB-int LTR MaLR 0 1651 1 2477 137 42 2 chr5 83341838 83342248 -119743284 - MSTB LTR MaLR 0 426 1 447 248 93 0 chr5 83342292 83342421 -119743111 + MIR SINE MIR 122 262 0 6603 25 1 0 chr5 83342486 83343261 -119742271 - L1PA3 LINE L1 -1662 4484 3709 4618 36 2 0 chr5 83343254 83343814 -119741718 + L1PA3 LINE L1 4475 5035 -1111 * 6355 35 24 83 chr5 83343816 83344931 -119740601 + L1PA3 LINE L1 5098 6155 0 1070 120 0 0 chr5 83345716 83345883 -119739649 + L1MA6 LINE L1 6134 6300 0 1006 270 117 3 chr5 83346362 83346669 -119738863 + LTR40a LTR ERVL 67 408 -111 622 189 0 9 chr5 83346679 83346790 -119738742 - FAM SINE Alu -71 114 5 564 157 139 9 chr5 83346793 83346901 -119738631 + LTR40a LTR ERVL 398 519 0 970 273 44 49 chr5 83346906 83347273 -119738259 - LTR16A LTR ERVL -23 427 63 224 349 0 0 chr5 83347669 83347732 -119737800 - L2 LINE L2 -9 3263 3201 278 206 15 29 chr5 83347868 83347936 -119737596 - MLT1L LTR MaLR -1 614 548 398 295 18 0 chr5 83347944 83348056 -119737476 - MER81 DNA DNA 0 114 1 355 197 45 0 chr5 83348057 83348123 -119737409 - HERV16 LTR ERVL -2020 2976 2908 27 0 0 0 chr5 83348120 83348147 -119737385 + AT_rich Low_complexity Low_complexity 1 27 0 * 2389 147 8 8 chr5 83348150 83348545 -119736987 - L1MA8 LINE L1 0 6291 5897 828 281 28 0 chr5 83348546 83348763 -119736769 - HERV16 LTR ERVL -2078 2918 2696 211 152 15 76 chr5 83348821 83348887 -119736645 + A-rich Low_complexity Low_complexity 2 63 0 28 0 0 0 chr5 83349407 83349435 -119736097 + AT_rich Low_complexity Low_complexity 1 28 0 516 302 57 56 chr5 83349437 83349737 -119735795 + L2 LINE L2 2768 3067 -246 1970 126 79 58 chr5 83349916 83350169 -119735363 - MLT1B LTR MaLR 0 390 125 4324 43 12 4 chr5 83350169 83350675 -119734857 - L1PA8 LINE L1 -2 6170 5661 1970 126 79 58 chr5 83350675 83350801 -119734731 - MLT1B LTR MaLR -265 125 3 228 255 0 0 chr5 83350804 83350851 -119734681 + L2 LINE L2 3267 3313 0 271 293 26 35 chr5 83350917 83351033 -119734499 - MER5B DNA MER1_type -62 116 2 5020 136 21 18 chr5 83353336 83354257 -119731275 - L1PA16 LINE L1 0 6166 5403 1496 298 32 43 chr5 83354366 83355296 -119730236 - HAL1 LINE L1 -815 1692 773 332 298 70 82 chr5 83355692 83355863 -119729669 - HAL1 LINE L1 -2286 221 53 1925 224 6 3 chr5 83356341 83356703 -119728829 + MLT1A1 LTR MaLR 1 363 -2 1470 192 117 35 chr5 83357471 83357893 -119727639 + MER66A LTR ERV1 98 478 0 227 291 126 19 chr5 83357895 83357998 -119727534 + MIR SINE MIR 1 114 -148 844 200 0 20 chr5 83358095 83358245 -119727287 + AluJo SINE Alu 1 147 -165 42016 48 3 1 chr5 83358247 83363352 -119722180 + L1P LINE L1 7 5122 -1024 648 125 0 0 chr5 83363452 83363556 -119721976 - L1P LINE L1 -806 5360 5257 2464 130 11 11 chr5 83363643 83364004 -119721528 + L1PA16 LINE L1 5806 6166 0 569 328 110 14 chr5 83364082 83364427 -119721105 - L2 LINE L2 -337 2977 2600 6073 217 40 13 chr5 83364429 83365373 -119720159 + L1M4 LINE L1 5 995 -5547 198 103 0 0 chr5 83365373 83365402 -119720130 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6073 217 40 13 chr5 83365402 83365743 -119719789 + L1M4 LINE L1 995 1325 -5217 230 339 105 0 chr5 83365801 83365925 -119719607 - L2 LINE L2 -3136 178 42 44588 42 1 5 chr5 83366297 83372469 -119713063 - L1PA3 LINE L1 0 6155 8 218 292 97 0 chr5 83372648 83372720 -119712812 + MIR3 SINE MIR 122 200 -8 355 310 48 83 chr5 83373168 83373397 -119712135 - MIR SINE MIR -16 246 26 309 295 62 18 chr5 83373430 83373542 -119711990 - MIR3 SINE MIR -5 203 87 25 31 0 0 chr5 83373602 83373634 -119711898 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr5 83374604 83374632 -119710900 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 270 0 0 0 chr5 83374635 83374665 -119710867 + (GA)n Simple_repeat Simple_repeat 2 31 0 1096 249 72 7 chr5 83376061 83376354 -119709178 + MLT1C LTR MaLR 7 318 -149 761 207 70 23 chr5 83376393 83376550 -119708982 + MLT1C LTR MaLR 322 461 -6 1034 180 92 29 chr5 83377027 83377233 -119708299 + MER20 DNA MER1_type 1 219 0 255 311 19 56 chr5 83377237 83377398 -119708134 - MLT1K LTR MaLR -296 292 138 1760 165 49 85 chr5 83378298 83378723 -119706809 - L1MB8 LINE L1 -38 6140 5731 197 287 59 59 chr5 83379215 83379316 -119706216 - MIR SINE MIR -50 212 112 285 298 25 66 chr5 83380196 83380317 -119705215 + L2 LINE L2 3198 3313 0 833 127 71 0 chr5 83380391 83380517 -119705015 + AluJb SINE Alu 3 137 -175 1015 161 35 0 chr5 83382564 83382738 -119702794 + AluJb SINE Alu 120 299 -13 437 305 127 21 chr5 83384960 83385058 -119700474 - MIR SINE MIR 0 262 176 2575 121 34 17 chr5 83385058 83385414 -119700118 - THE1B LTR MaLR -2 362 1 437 305 127 21 chr5 83385414 83385551 -119699981 - MIR SINE MIR -86 176 2 699 192 17 0 chr5 83386428 83386605 -119698927 + CT-rich Low_complexity Low_complexity 1 180 0 211 256 11 22 chr5 83386838 83386928 -119698604 + G-rich Low_complexity Low_complexity 6 94 0 245 215 13 44 chr5 83386928 83387157 -119698375 + (CGGGG)n Simple_repeat Simple_repeat 1 221 0 341 235 35 35 chr5 83387180 83387295 -119698237 - AluSq/x SINE Alu -182 120 6 1482 244 35 27 chr5 83387319 83387725 -119697807 + LTR16C LTR ERVL 83 491 0 3277 90 18 7 chr5 83388040 83388496 -119697036 + L1MA1 LINE L1 5842 6302 0 247 291 68 48 chr5 83388574 83388677 -119696855 + L2 LINE L2 3168 3272 0 295 192 0 0 chr5 83388682 83388734 -119696798 - MIR SINE MIR -154 108 57 1189 203 160 16 chr5 83389944 83390314 -119695218 + MER110A LTR ERV1 71 471 -1 198 103 0 0 chr5 83392396 83392425 -119693107 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 244 321 170 0 chr5 83392428 83392534 -119692998 - L2 LINE L2 -12 3260 3137 23 0 0 0 chr5 83392889 83392912 -119692620 + AT_rich Low_complexity Low_complexity 1 23 0 249 317 6 55 chr5 83392912 83393076 -119692456 + L1ME LINE L1 5420 5575 -546 783 260 185 38 chr5 83393081 83393454 -119692078 + MLT1J2 LTR MaLR 1 428 -22 509 135 22 0 chr5 83393484 83393573 -119691959 - MIR SINE MIR -108 154 64 6159 136 20 4 chr5 83393575 83394942 -119690590 + L1PB2 LINE L1 4771 6151 0 21 0 0 0 chr5 83394988 83395009 -119690523 + AT_rich Low_complexity Low_complexity 1 21 0 200 260 156 62 chr5 83395021 83395117 -119690415 - MIR SINE MIR -156 106 2 39 74 0 0 chr5 83396212 83396293 -119689239 + AT_rich Low_complexity Low_complexity 1 81 0 3810 130 18 44 chr5 83397721 83398381 -119687151 + L1MA10 LINE L1 5692 6334 0 874 168 25 0 chr5 83398605 83398766 -119686766 - L1MB4 LINE L1 -1 6179 6015 275 327 19 31 chr5 83400588 83400750 -119684782 + CT-rich Low_complexity Low_complexity 3 162 0 1962 156 7 0 chr5 83401381 83401676 -119683856 + AluSx SINE Alu 1 297 -15 308 364 49 14 chr5 83401795 83401938 -119683594 + MIR3 SINE MIR 14 161 -47 353 316 53 0 chr5 83402390 83402542 -119682990 + L2 LINE L2 2534 2693 -621 731 239 98 57 chr5 83402640 83402895 -119682637 + LTR16A LTR ERVL 61 333 -117 2021 188 63 29 chr5 83402895 83403385 -119682147 - MER9 LTR ERVK 0 511 5 731 239 98 57 chr5 83403385 83403447 -119682085 + LTR16A LTR ERVL 333 391 -59 729 307 58 82 chr5 83403452 83403994 -119681538 + L2 LINE L2 2787 3312 -1 343 277 157 60 chr5 83404540 83404706 -119680826 - MIR SINE MIR -48 214 33 1941 127 40 3 chr5 83404815 83405114 -119680418 - AluSg SINE Alu 0 310 1 7267 41 3 0 chr5 83405589 83406644 -119678888 + L1PA4 LINE L1 5096 6152 -3 1176 165 11 0 chr5 83406649 83406831 -119678701 + FRAM SINE Alu 1 176 0 194 128 26 0 chr5 83407373 83407412 -119678120 + (TTA)n Simple_repeat Simple_repeat 2 41 0 580 285 168 5 chr5 83408113 83408327 -119677205 - MIR SINE MIR -12 250 2 261 57 0 0 chr5 83409580 83409615 -119675917 + (TC)n Simple_repeat Simple_repeat 2 36 0 229 286 0 0 chr5 83410195 83410265 -119675267 + L1 LINE L1 4028 4097 -2049 22 88 0 0 chr5 83410352 83410409 -119675123 + AT_rich Low_complexity Low_complexity 1 57 0 1671 198 136 7 chr5 83410429 83410869 -119674663 + LTR54B LTR ERV1 1 497 -1 2166 301 59 5 chr5 83410960 83411762 -119673770 + L2 LINE L2 1399 2243 -1071 474 286 0 35 chr5 83411764 83411995 -119673537 + HsTC2 DNA Tc2 4 217 -1681 369 219 67 0 chr5 83411996 83412101 -119673431 + HsTC2 DNA Tc2 497 608 -1290 303 203 34 0 chr5 83412121 83412180 -119673352 + AluS SINE Alu 1 61 -247 779 148 0 0 chr5 83412185 83412307 -119673225 + AluJb SINE Alu 178 299 -13 15725 154 10 5 chr5 83412307 83415308 -119670224 + L1PA12 LINE L1 2251 5275 -893 2055 32 0 8 chr5 83415308 83415554 -119669978 + L1PA2 LINE L1 5907 6155 0 15725 154 10 5 chr5 83415554 83416407 -119669125 + L1PA12 LINE L1 5275 6123 -45 601 89 0 0 chr5 83416457 83416547 -119668985 + L1PA13 LINE L1 6071 6160 -3 405 257 125 0 chr5 83416547 83416691 -119668841 + HsTC2 DNA Tc2 578 739 -1159 413 180 23 55 chr5 83416693 83416821 -119668711 + HsTC2 DNA Tc2 1283 1582 -316 300 278 138 91 chr5 83417078 83417441 -119668091 + MLT1H LTR MaLR 107 486 -63 193 360 33 20 chr5 83417441 83417591 -119667941 + L3 LINE CR1 1238 1389 -188 444 224 105 56 chr5 83417658 83417801 -119667731 - MIR SINE MIR -21 241 92 231 129 247 65 chr5 83417802 83417834 -119667698 - MLT2C2 LTR ERVL 0 399 374 633 53 61 0 chr5 83417834 83417948 -119667584 + (TCTA)n Simple_repeat Simple_repeat 1 121 0 231 129 247 65 chr5 83417948 83418008 -119667524 - MLT2C2 LTR ERVL -25 374 288 345 60 12 60 chr5 83418157 83418240 -119667292 + (TA)n Simple_repeat Simple_repeat 1 79 0 14263 199 36 20 chr5 83418247 83424503 -119661029 - L1P5 LINE L1 -357 6510 6 4107 164 46 22 chr5 83424870 83425239 -119660293 + L1MC3 LINE L1 5521 5880 -1905 2369 97 0 0 chr5 83425239 83425538 -119659994 + AluSq SINE Alu 1 299 -14 4107 164 46 22 chr5 83425538 83426058 -119659474 + L1MC3 LINE L1 5880 6431 -1354 315 146 18 0 chr5 83426057 83426112 -119659420 + L1MC3 LINE L1 7062 7117 -668 * 238 273 0 0 chr5 83426112 83426178 -119659354 + MLT1F1 LTR MaLR 51 116 -451 3095 140 54 5 chr5 83426179 83426653 -119658879 + L1MC3 LINE L1 7181 7689 -96 2197 110 0 0 chr5 83426653 83426943 -119658589 - AluSq SINE Alu -16 297 8 3095 140 54 5 chr5 83426943 83427045 -119658487 + L1MC3 LINE L1 7689 7785 0 675 308 97 24 chr5 83477695 83478065 -119607467 + MLT1J2 LTR MaLR 30 426 -24 217 296 0 37 chr5 83478538 83478619 -119606913 + L2 LINE L2 3220 3297 -16 307 207 0 0 chr5 83480698 83480756 -119604776 + L1MC4 LINE L1 6648 6705 -1337 971 179 61 38 chr5 83480877 83481089 -119604443 - MER20 DNA MER1_type -2 217 1 327 294 102 48 chr5 83481097 83481576 -119603956 - L1MC/D LINE L1 -2032 5845 5341 220 318 58 91 chr5 83481705 83481726 -119603806 - MIR3 SINE MIR -57 151 131 1223 214 8 0 chr5 83481726 83481960 -119603572 + MER8 DNA MER2_type 4 239 0 220 318 58 91 chr5 83481960 83482092 -119603440 - MIR3 SINE MIR -77 131 3 381 22 0 0 chr5 83483245 83483291 -119602241 + (CA)n Simple_repeat Simple_repeat 2 47 0 2427 99 0 0 chr5 83484109 83484411 -119601121 - AluSq SINE Alu -11 302 1 252 175 88 0 chr5 83484566 83484623 -119600909 - L1MC/D LINE L1 -1407 4808 4747 2317 225 73 32 chr5 83484711 83485396 -119600136 - L1MC/D LINE L1 -5648 748 36 904 181 52 38 chr5 83485738 83485948 -119599584 - MER20 DNA MER1_type 0 219 7 223 343 55 0 chr5 83485967 83486040 -119599492 + L2 LINE L2 3150 3226 -46 1386 189 33 3 chr5 83486140 83486446 -119599086 - L1MA8 LINE L1 -4 6287 5973 341 302 38 0 chr5 83486447 83486553 -119598979 - MER5A DNA MER1_type -37 152 43 310 261 101 25 chr5 83486455 83486574 -119598958 + MER5A DNA MER1_type 56 183 -6 * 252 0 0 0 chr5 83487309 83487337 -119598195 + (T)n Simple_repeat Simple_repeat 1 28 0 692 102 0 0 chr5 83487733 83487831 -119597701 + AluSg/x SINE Alu 212 309 -1 39666 39 24 2 chr5 83489290 83495245 -119590287 - L1PA3 LINE L1 0 6155 66 400 266 91 100 chr5 83495398 83495639 -119589893 + MIR SINE MIR 13 251 -11 252 240 120 0 chr5 83496439 83496514 -119589018 - MIR3 SINE MIR -4 204 121 2335 121 0 0 chr5 83496514 83496827 -119588705 + AluSq SINE Alu 1 313 0 778 269 68 41 chr5 83498156 83498717 -119586815 - MER115 DNA AcHobo -18 675 55 795 309 52 4 chr5 83499270 83499500 -119586032 + MIR SINE MIR 13 253 -9 446 265 72 94 chr5 83499878 83500236 -119585296 + MLT1G1 LTR MaLR 2 351 -244 746 246 47 23 chr5 83500236 83500451 -119585081 + MLT1F LTR MaLR 1 220 -322 267 330 93 21 chr5 83500451 83500548 -119584984 - MIR SINE MIR -151 111 8 6579 78 5 5 chr5 83500921 83500938 -119584594 - L1PA10 LINE L1 -5 6163 6147 189 0 0 0 chr5 83500938 83500959 -119584573 + (TTTAA)n Simple_repeat Simple_repeat 3 23 0 6579 78 5 5 chr5 83500959 83502585 -119582947 - L1PA10 LINE L1 -20 6148 4520 371 254 107 8 chr5 83502968 83503090 -119582442 - L2 LINE L2 0 3313 3180 222 222 19 0 chr5 83503421 83503475 -119582057 - L2 LINE L2 -224 3048 2994 1605 219 36 25 chr5 83504134 83504573 -119580959 - L1ME3A LINE L1 -7 6163 5720 372 145 43 0 chr5 83504721 83504790 -119580742 + L1MA8 LINE L1 6039 6110 -181 1440 56 0 30 chr5 83504792 83504989 -119580543 - AluY SINE Alu 0 311 121 856 141 43 11 chr5 83504989 83505173 -119580359 + L1MA8 LINE L1 6095 6284 -7 2346 148 114 2 chr5 83505192 83505604 -119579928 - MLT2B2 LTR ERVL -57 458 1 611 192 51 138 chr5 83505605 83505881 -119579651 + MLT1B LTR MaLR 90 341 -49 869 138 17 11 chr5 83505903 83506077 -119579455 + GA-rich Low_complexity Low_complexity 4 178 0 2164 92 41 3 chr5 83506097 83506391 -119579141 + AluY SINE Alu 1 305 -6 364 304 82 0 chr5 83506517 83506652 -119578880 + L3 LINE CR1 1430 1575 -2 905 285 47 27 chr5 83506950 83507206 -119578326 + MIR SINE MIR 1 261 -1 264 100 0 0 chr5 83507612 83507652 -119577880 + (TC)n Simple_repeat Simple_repeat 1 40 0 310 277 130 50 chr5 83508219 83508912 -119576620 + L1ME4a LINE L1 5373 6120 -1 32 57 0 0 chr5 83509947 83510000 -119575532 + AT_rich Low_complexity Low_complexity 1 53 0 34 0 0 0 chr5 83511001 83511035 -119574497 + AT_rich Low_complexity Low_complexity 1 34 0 207 0 0 0 chr5 83511048 83511071 -119574461 + (TTG)n Simple_repeat Simple_repeat 2 24 0 15710 109 11 11 chr5 83511071 83514299 -119571233 - L1PA8 LINE L1 -16 6156 2926 2360 48 0 0 chr5 83514308 83514600 -119570932 - L1PA5 LINE L1 0 6154 5863 404 286 107 30 chr5 83514668 83514836 -119570696 + MIR SINE MIR 47 227 -35 14192 126 20 29 chr5 83516001 83518433 -119567099 - Tigger1 DNA MER2_type -8 2410 1 1543 170 8 102 chr5 83519261 83519661 -119565871 + MLT1A1 LTR MaLR 4 365 0 590 334 58 54 chr5 83520310 83520810 -119564722 + LTR67 LTR ERVL 48 549 -8 612 305 120 0 chr5 83522653 83523053 -119562479 - L1ME4a LINE L1 -107 6014 5567 4667 35 0 12 chr5 83523128 83523696 -119561836 + L1PA5 LINE L1 5593 6153 -1 189 0 0 0 chr5 83523875 83523896 -119561636 + (A)n Simple_repeat Simple_repeat 1 21 0 339 305 92 23 chr5 83524205 83524336 -119561196 - L1ME4a LINE L1 -686 5435 5296 493 365 33 13 chr5 83524735 83525036 -119560496 - L1ME4a LINE L1 -1560 4586 4280 305 305 79 42 chr5 83525143 83525550 -119559982 - L1P LINE L1 -2001 4145 3724 196 155 17 17 chr5 83526856 83526914 -119558618 + CT-rich Low_complexity Low_complexity 2 59 0 333 47 0 0 chr5 83526914 83526957 -119558575 + (CA)n Simple_repeat Simple_repeat 1 43 0 189 341 73 24 chr5 83529363 83529486 -119556046 - L2 LINE L2 -3 3310 3182 2679 146 38 9 chr5 83529677 83530479 -119555053 - L1PB1 LINE L1 -486 5665 4844 3247 82 18 0 chr5 83530479 83530569 -119554963 + L1PB1 LINE L1 5691 5778 -373 399 89 0 0 chr5 83530569 83530625 -119554907 + (TA)n Simple_repeat Simple_repeat 1 56 0 3247 82 18 0 chr5 83530625 83530986 -119554546 + L1PB1 LINE L1 5778 6150 -1 235 281 18 0 chr5 83531996 83532053 -119553479 - L2 LINE L2 -10 3303 3246 663 275 113 32 chr5 83532060 83532493 -119553039 - MLT1L LTR MaLR -10 605 138 297 297 43 32 chr5 83533535 83533720 -119551812 - L1MEd LINE L1 -5359 760 574 1432 189 46 37 chr5 83534119 83534553 -119550979 + L1MC5 LINE L1 7158 7595 -366 2103 295 29 6 chr5 83535017 83535638 -119549894 - L2 LINE L2 -2599 715 81 29 0 0 0 chr5 83536959 83536988 -119548544 + AT_rich Low_complexity Low_complexity 1 29 0 197 378 37 22 chr5 83537589 83537724 -119547808 - MIR SINE MIR -6 256 120 224 185 0 31 chr5 83538581 83538646 -119546886 + (TTAA)n Simple_repeat Simple_repeat 2 64 0 575 159 30 0 chr5 83539580 83539712 -119545820 + CT-rich Low_complexity Low_complexity 1 136 0 221 209 0 0 chr5 83541279 83541322 -119544210 - L2 LINE L2 -5 3267 3225 309 323 103 72 chr5 83541405 83542100 -119543432 - L1M2 LINE L1 -5589 1260 596 226 211 0 0 chr5 83542618 83542656 -119542876 + polypurine Low_complexity Low_complexity 1 38 0 335 251 21 66 chr5 83542666 83542838 -119542694 + MIR SINE MIR 36 197 -27 297 0 0 0 chr5 83542906 83542939 -119542593 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 274 78 0 chr5 83544030 83544081 -119541451 + MIR3 SINE MIR 139 193 -15 420 353 17 12 chr5 83544594 83544767 -119540765 - MER5A DNA MER1_type 0 189 16 236 325 13 13 chr5 83545063 83545140 -119540392 + L2 LINE L2 2768 2844 -470 681 186 38 16 chr5 83545314 83545412 -119540120 - MER53 DNA DNA -2 187 82 1722 181 70 6 chr5 83545412 83545755 -119539777 - MLT1A1 LTR MaLR 0 365 1 681 186 38 16 chr5 83545755 83545839 -119539693 - MER53 DNA DNA -107 82 1 344 243 14 128 chr5 83545913 83546061 -119539471 + L2 LINE L2 3183 3313 0 5598 76 14 0 chr5 83546109 83546876 -119538656 - L1PA10 LINE L1 -4 6164 5387 315 333 24 16 chr5 83546877 83547003 -119538529 + MIR SINE MIR 88 214 -48 593 293 60 0 chr5 83547248 83547415 -119538117 + MER45A DNA AcHobo 2 178 0 472 184 35 0 chr5 83548792 83548879 -119536653 - 5S rRNA rRNA -1 120 31 383 272 60 22 chr5 83548952 83549136 -119536396 + L1MC4a LINE L1 5696 5886 -1922 487 245 92 36 chr5 83550131 83550327 -119535205 - L1ME3A LINE L1 0 6170 5964 621 213 28 0 chr5 83551051 83551199 -119534333 + FLAM_A SINE Alu 1 151 0 1537 229 58 14 chr5 83551278 83551723 -119533809 - L1ME2 LINE L1 -14 6150 5686 418 167 24 24 chr5 83551725 83551809 -119533723 - MLT1D LTR MaLR -421 84 1 1287 188 28 38 chr5 83551809 83552207 -119533325 - L1ME2 LINE L1 -775 5371 4978 612 179 173 0 chr5 83552239 83552401 -119533131 - L1MC2 LINE L1 -8 6336 6147 333 211 32 32 chr5 83553471 83553566 -119531966 - MLT1G1 LTR MaLR -16 579 485 1011 202 90 122 chr5 83553712 83554123 -119531409 + MLT2B1 LTR ERVL 1 398 -16 1548 262 69 12 chr5 83554196 83554773 -119530759 + MER20B DNA MER1_type 135 744 -39 270 0 0 0 chr5 83556451 83556481 -119529051 + (TG)n Simple_repeat Simple_repeat 2 31 0 295 278 87 8 chr5 83557467 83557593 -119527939 + L3b LINE CR1 1190 1325 -258 1077 177 9 69 chr5 83557858 83558090 -119527442 - MER20 DNA MER1_type -1 218 1 378 259 69 63 chr5 83558535 83558709 -119526823 - L2 LINE L2 -18 3295 3121 420 300 62 25 chr5 83559061 83559221 -119526311 + L2 LINE L2 2576 2741 -573 310 285 49 106 chr5 83559294 83559540 -119525992 + L2 LINE L2 2865 3096 -176 184 348 73 0 chr5 83559669 83559783 -119525749 - MIR SINE MIR -65 143 21 309 245 94 38 chr5 83560743 83560849 -119524683 - MIR SINE MIR 0 262 151 1184 201 4 0 chr5 83560861 83561120 -119524412 + L1M4 LINE L1 3539 3798 -2348 233 245 0 0 chr5 83561426 83561479 -119524053 + L2 LINE L2 1914 1966 -1348 981 200 0 0 chr5 83561479 83561644 -119523888 - FAM SINE Alu -10 165 1 214 189 0 0 chr5 83561685 83561722 -119523810 + L2 LINE L2 1957 1993 -1321 1461 248 142 31 chr5 83561722 83562061 -119523471 + LTR50 LTR ERVL 1 301 -494 1559 199 146 19 chr5 83562061 83562472 -119523060 + MLT1C LTR MaLR 4 466 -1 1461 248 142 31 chr5 83562472 83562801 -119522731 + LTR50 LTR ERVL 301 743 -52 2821 263 70 24 chr5 83562829 83564074 -119521458 + L2 LINE L2 1983 3281 -32 1804 147 42 3 chr5 83564679 83564964 -119520568 + AluSx SINE Alu 1 296 -16 1544 200 99 25 chr5 83566583 83567018 -119518514 + MLT1C LTR MaLR 1 467 0 271 281 167 69 chr5 83567958 83568146 -119517386 + MIR3 SINE MIR 11 212 -50 483 205 90 0 chr5 83569019 83569141 -119516391 - MER103 DNA DNA -8 158 26 965 263 164 20 chr5 83569148 83569805 -119515727 - L2 LINE L2 -2 3311 2551 246 128 0 0 chr5 83571018 83571057 -119514475 + (CA)n Simple_repeat Simple_repeat 1 39 0 231 233 0 50 chr5 83572099 83572159 -119513373 - MIR SINE MIR -170 92 36 301 277 227 18 chr5 83572851 83573172 -119512360 + L2 LINE L2 2714 3087 -226 270 193 35 7 chr5 83573180 83573303 -119512229 - MER3 DNA MER1_type 0 209 1 555 280 65 20 chr5 83573312 83573512 -119512020 + L2 LINE L2 3103 3311 -2 21 82 0 0 chr5 83574336 83574385 -119511147 + AT_rich Low_complexity Low_complexity 1 49 0 380 310 114 12 chr5 83574488 83574733 -119510799 + L1ME4a LINE L1 4548 4817 -1329 1005 240 107 33 chr5 83575123 83575552 -119509980 - MLT1C LTR MaLR 0 467 1 429 290 195 23 chr5 83575590 83575798 -119509734 + L1ME4a LINE L1 5379 5550 -571 2162 139 0 3 chr5 83575798 83576101 -119509431 + AluSx SINE Alu 1 302 -10 429 290 195 23 chr5 83576101 83576334 -119509198 + L1ME4a LINE L1 5550 5896 -225 204 122 0 0 chr5 83576804 83576845 -119508687 + (A)n Simple_repeat Simple_repeat 1 41 0 553 145 23 38 chr5 83576904 83577035 -119508497 - Charlie1 DNA MER1_type -1 2760 2632 985 152 11 0 chr5 83577063 83577247 -119508285 + L1MA6 LINE L1 6103 6288 -12 493 237 52 0 chr5 83577247 83577382 -119508150 - Charlie1 DNA MER1_type -2524 237 96 211 146 0 91 chr5 83577410 83577465 -119508067 + (T)n Simple_repeat Simple_repeat 1 50 0 12174 24 0 1 chr5 83577465 83579660 -119505872 - L1PA3 LINE L1 0 6155 3962 8402 37 9 6 chr5 83579660 83580779 -119504753 + L1PA3 LINE L1 2827 3948 -2198 402 260 29 10 chr5 83580780 83580884 -119504648 - Charlie1 DNA MER1_type -2654 107 2 333 308 56 0 chr5 83581034 83581177 -119504355 + L1ME4a LINE L1 5931 6081 -40 3555 175 19 27 chr5 83581189 83581931 -119503601 - L1MB3 LINE L1 -4 6179 5444 21 36 0 0 chr5 83582402 83582430 -119503102 + AT_rich Low_complexity Low_complexity 1 28 0 376 252 25 17 chr5 83583581 83583700 -119501832 + MIR SINE MIR 117 236 -26 277 314 159 0 chr5 83584461 83584706 -119500826 + LTR16A1 LTR ERVL 160 443 -14 351 244 92 34 chr5 83584711 83584830 -119500702 - MIR SINE MIR -17 245 120 361 235 101 25 chr5 83585205 83585324 -119500208 + MIR SINE MIR 16 143 -119 552 148 20 0 chr5 83585555 83585656 -119499876 - L1MD2 LINE L1 -13 6346 6244 252 0 0 0 chr5 83586583 83586611 -119498921 + (A)n Simple_repeat Simple_repeat 1 28 0 201 74 0 0 chr5 83587232 83587259 -119498273 + (GA)n Simple_repeat Simple_repeat 1 27 0 278 261 81 19 chr5 83588916 83589077 -119496455 - L1MC4 LINE L1 0 8042 7872 33 0 0 0 chr5 83589423 83589456 -119496076 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr5 83590411 83590439 -119495093 + AT_rich Low_complexity Low_complexity 1 28 0 275 339 39 8 chr5 83591314 83591444 -119494088 - L2 LINE L2 -18 3295 3162 267 300 170 19 chr5 83591545 83591815 -119493717 - L2 LINE L2 -751 2563 2253 197 311 74 33 chr5 83592759 83592881 -119492651 - L2 LINE L2 -1412 1902 1776 * 204 267 0 0 chr5 83592868 83592913 -119492619 - L2 LINE L2 -5 3308 3264 547 63 13 0 chr5 83593159 83593238 -119492294 + L1PA7 LINE L1 6070 6149 -5 579 243 98 31 chr5 83593483 83593726 -119491806 + MIR SINE MIR 1 261 -1 196 328 127 26 chr5 83593735 83593924 -119491608 - L2 LINE L2 -665 2649 2442 316 319 59 12 chr5 83594619 83594788 -119490744 - MIR3 SINE MIR -8 200 24 637 178 25 8 chr5 83595143 83595261 -119490271 + L2 LINE L2 3194 3313 0 2313 95 0 3 chr5 83595339 83595635 -119489897 + AluY SINE Alu 1 295 -16 919 20 0 0 chr5 83596358 83596460 -119489072 - AluYb8 SINE Alu -3 315 214 400 258 21 0 chr5 83596648 83596741 -119488791 - L2 LINE L2 -5 3308 3214 2419 97 0 0 chr5 83598046 83598355 -119487177 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr5 83598355 83598382 -119487150 + AT_rich Low_complexity Low_complexity 1 27 0 2284 93 3 10 chr5 83599391 83599693 -119485839 - AluSc SINE Alu -9 300 1 285 317 90 0 chr5 83599909 83600033 -119485499 - MER20B DNA MER1_type -5 214 77 250 377 37 11 chr5 83600355 83600546 -119484986 - MIR3 SINE MIR -3 205 10 338 194 174 0 chr5 83600565 83600663 -119484869 + L1MB3 LINE L1 6069 6183 0 558 258 65 39 chr5 83600843 83600998 -119484534 + MER91A DNA MER1_type 3 161 -35 21 36 0 0 chr5 83601927 83601955 -119483577 + AT_rich Low_complexity Low_complexity 1 28 0 4073 70 24 0 chr5 83602698 83603239 -119482293 - MER41A LTR ERV1 0 554 1 219 88 0 0 chr5 83603298 83603332 -119482200 + (A)n Simple_repeat Simple_repeat 1 34 0 938 194 82 90 chr5 83603365 83603742 -119481790 + L1MB4 LINE L1 5807 6180 0 1687 200 3 13 chr5 83604956 83605261 -119480271 - AluJb SINE Alu -10 302 1 335 136 0 0 chr5 83605524 83605583 -119479949 + MER53 DNA DNA 111 169 -20 268 270 34 56 chr5 83605707 83605796 -119479736 + MER5A DNA MER1_type 81 167 -22 322 240 40 0 chr5 83605882 83605982 -119479550 - MER5A DNA MER1_type -77 112 9 2010 101 65 0 chr5 83606707 83606984 -119478548 - AluSc SINE Alu -14 295 1 1930 162 0 6 chr5 83607136 83607450 -119478082 - AluJo SINE Alu 0 312 1 273 312 7 43 chr5 83607615 83607756 -119477776 - L2 LINE L2 -219 3053 2918 234 247 161 32 chr5 83608250 83608343 -119477189 + L2 LINE L2 3158 3262 -10 266 364 121 15 chr5 83609982 83610114 -119475418 - L2 LINE L2 -2 3270 3125 268 175 175 68 chr5 83611139 83611242 -119474290 + L1MB8 LINE L1 6 119 -6740 1160 178 107 74 chr5 83611246 83611779 -119473753 - MER4C LTR ERV1 0 465 2 4828 257 55 36 chr5 83611788 83613919 -119471613 + L1MB8 LINE L1 128 2307 -4652 192 152 0 0 chr5 83614065 83614098 -119471434 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 1928 232 35 47 chr5 83614177 83615227 -119470305 + L1MB8 LINE L1 2476 3471 -3486 5030 199 118 27 chr5 83615229 83615938 -119469594 + L1MB8 LINE L1 4376 5019 -1970 1934 191 66 9 chr5 83615938 83616377 -119469155 - MLT1C LTR MaLR -3 464 1 5030 199 118 27 chr5 83616377 83617931 -119467601 + L1MB8 LINE L1 5019 6849 -140 1004 193 0 17 chr5 83617966 83618142 -119467390 - AluJb SINE Alu -139 173 1 595 208 34 7 chr5 83618142 83618291 -119467241 + L1MB8 LINE L1 6831 6983 -6 192 361 14 0 chr5 83619023 83619095 -119466437 + MIR3 SINE MIR 129 201 -7 265 214 0 163 chr5 83619768 83619866 -119465666 + L2 LINE L2 3185 3266 -6 392 183 118 11 chr5 83719970 83720063 -119365469 + AluSq/x SINE Alu 3 105 -197 484 283 60 16 chr5 83720188 83720372 -119365160 + L1MC4 LINE L1 7472 7663 -379 236 146 18 18 chr5 83720487 83720542 -119364990 + (TG)n Simple_repeat Simple_repeat 2 56 0 253 307 76 12 chr5 83721072 83721181 -119364351 - AluSp SINE Alu -92 211 135 422 252 65 8 chr5 83721315 83721438 -119364094 + FLAM_A SINE Alu 1 130 -3 22 0 0 0 chr5 83721617 83721639 -119363893 + AT_rich Low_complexity Low_complexity 1 22 0 35 63 0 0 chr5 83722339 83722402 -119363130 + AT_rich Low_complexity Low_complexity 1 63 0 24 91 0 0 chr5 83722472 83722538 -119362994 + AT_rich Low_complexity Low_complexity 1 66 0 590 243 39 15 chr5 83722969 83723175 -119362357 - L1M4 LINE L1 -3328 4237 4027 191 301 84 12 chr5 83723688 83723771 -119361761 + MIR SINE MIR 87 175 -87 331 301 167 11 chr5 83724736 83724922 -119360610 + MIR SINE MIR 48 262 0 404 264 206 45 chr5 83725178 83725508 -119360024 + L1ME4a LINE L1 5008 5390 -756 347 291 30 55 chr5 83726562 83726727 -119358805 + L1ME4a LINE L1 5773 5933 -188 25 0 0 0 chr5 83728059 83728084 -119357448 + AT_rich Low_complexity Low_complexity 1 25 0 417 287 35 12 chr5 83729184 83729453 -119356079 - L1M4 LINE L1 -3769 3796 3520 557 303 32 24 chr5 83729797 83730176 -119355356 - L1M4 LINE L1 -4303 3263 2882 231 0 0 71 chr5 83734324 83734366 -119351166 + (CA)n Simple_repeat Simple_repeat 2 40 0 412 259 96 56 chr5 83739239 83739436 -119346096 - MIR SINE MIR 0 262 58 575 176 0 8 chr5 83740066 83740197 -119345335 + (CA)n Simple_repeat Simple_repeat 2 131 0 233 148 19 37 chr5 83743671 83743725 -119341807 + A-rich Low_complexity Low_complexity 2 54 0 1405 292 41 25 chr5 83744219 83744994 -119340538 + L1M3 LINE L1 2555 3342 -2804 1238 263 30 25 chr5 83746418 83746817 -119338715 + L1M3 LINE L1 5323 5723 -460 460 218 138 109 chr5 83747088 83747437 -119338095 + L1MA5A LINE L1 5509 5867 -430 21 36 0 0 chr5 83748351 83748379 -119337153 + GC_rich Low_complexity Low_complexity 1 28 0 1102 295 33 36 chr5 83748914 83749491 -119336041 + L1 LINE L1 4752 5326 -820 227 244 0 0 chr5 83749522 83749567 -119335965 - L1M3 LINE L1 -433 5901 5857 374 313 62 16 chr5 83752248 83752376 -119333156 - L2 LINE L2 0 3272 3139 243 308 0 0 chr5 83755788 83755853 -119329679 + tRNA-Ala-GCG tRNA tRNA 1 65 -10 196 338 0 50 chr5 83761429 83761509 -119324023 - MIR SINE MIR -66 142 67 434 211 93 50 chr5 83761843 83762004 -119323528 - AluJo SINE Alu -21 291 124 215 277 169 12 chr5 83763806 83763889 -119321643 - MIR SINE MIR -150 112 17 273 57 0 0 chr5 83764570 83764605 -119320927 + (A)n Simple_repeat Simple_repeat 1 35 0 258 260 17 40 chr5 83768217 83768390 -119317142 + A-rich Low_complexity Low_complexity 3 171 0 400 155 103 31 chr5 83770823 83770920 -119314612 + AluSq/x SINE Alu 2 105 -197 225 0 0 0 chr5 83772033 83772058 -119313474 + (TG)n Simple_repeat Simple_repeat 1 25 0 280 21 0 64 chr5 83772448 83772495 -119313037 + (TTA)n Simple_repeat Simple_repeat 3 46 0 429 109 0 0 chr5 83772867 83772931 -119312601 + (TA)n Simple_repeat Simple_repeat 1 64 0 359 238 12 54 chr5 83773133 83773301 -119312231 + MER2 DNA MER2_type 51 211 -134 396 0 0 0 chr5 83773978 83774022 -119311510 + (TCTG)n Simple_repeat Simple_repeat 3 46 0 414 213 21 78 chr5 83774145 83774286 -119311246 + L1MB8 LINE L1 6034 6166 -12 262 128 64 43 chr5 83774286 83774380 -119311152 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 246 232 74 63 chr5 83774651 83774746 -119310786 + AluJ/FLAM SINE Alu 3 98 -204 254 270 110 30 chr5 83775528 83775628 -119309904 + AluJo SINE Alu 113 220 -82 213 170 57 57 chr5 83776363 83776416 -119309116 + MIR SINE MIR 13 65 -197 285 256 109 58 chr5 83776553 83776709 -119308823 - FRAM SINE Alu -2 164 1 21 0 0 0 chr5 83776711 83776732 -119308800 + AT_rich Low_complexity Low_complexity 1 21 0 268 200 42 11 chr5 83776869 83776964 -119308568 + (TA)n Simple_repeat Simple_repeat 1 98 0 630 248 201 52 chr5 83777288 83777727 -119307805 - MLT1E2 LTR MaLR -8 618 115 273 219 31 0 chr5 83777786 83777850 -119307682 - MLT1E2 LTR MaLR -584 70 5 479 303 31 42 chr5 83781175 83781651 -119303881 + L1M2 LINE L1 2792 3262 -4304 328 265 16 54 chr5 83781776 83781961 -119303571 + L1M2 LINE L1 3490 3667 -3898 321 258 53 89 chr5 83782714 83782904 -119302628 - MLT1F1 LTR MaLR -332 235 53 363 23 0 0 chr5 83783656 83783700 -119301832 + (GTTTG)n Simple_repeat Simple_repeat 4 47 0 254 208 292 0 chr5 83783732 83783804 -119301728 - AluSq/x SINE Alu -197 105 13 276 30 0 0 chr5 83784778 83784811 -119300721 + (TG)n Simple_repeat Simple_repeat 2 34 0 201 121 0 0 chr5 83787488 83787521 -119298011 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 193 147 0 29 chr5 83788690 83788724 -119296808 - MIR SINE MIR -13 249 217 367 192 115 33 chr5 83788852 83789008 -119296524 + AluS SINE Alu 4 95 -208 294 50 0 0 chr5 83789012 83789052 -119296480 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7313 268 15 21 chr5 83790871 83793570 -119291962 - L1P4 LINE L1 -665 5501 2819 278 177 10 52 chr5 83793850 83793946 -119291586 + (TGGG)n Simple_repeat Simple_repeat 2 93 0 443 207 50 8 chr5 83793978 83794099 -119291433 - HERVH LTR ERV1 -4427 3286 3161 21179 84 9 27 chr5 83794099 83797146 -119288386 - HERVH LTR ERV1 -4718 2995 1 3542 56 2 7 chr5 83797148 83797598 -119287934 - LTR7 LTR ERV1 -2 448 1 814 91 9 0 chr5 83797598 83797708 -119287824 - AluSg SINE Alu -199 111 1 622 187 52 15 chr5 83797742 83797876 -119287656 - MER21B LTR ERV1 -623 240 102 1250 114 0 0 chr5 83797952 83798127 -119287405 - AluSg/x SINE Alu -4 308 134 2081 104 0 3 chr5 83798128 83798425 -119287107 - AluSq SINE Alu -12 301 6 345 130 0 65 chr5 83798436 83798513 -119287019 - LTR56 LTR ERV1 -370 75 4 2173 101 0 3 chr5 83799843 83800140 -119285392 - AluSg SINE Alu -14 296 1 1795 136 29 16 chr5 83800445 83800753 -119284779 - AluSx SINE Alu 0 312 1 380 129 0 29 chr5 83800753 83800814 -119284718 - Alu SINE Alu -7 294 234 773 159 185 6 chr5 83800814 83800971 -119284561 - AluSx SINE Alu -126 186 2 327 208 156 0 chr5 83801510 83801587 -119283945 + L2 LINE L2 3225 3313 0 2150 122 0 0 chr5 83802472 83802775 -119282757 - AluSx SINE Alu -9 303 1 22 0 0 0 chr5 83803531 83803553 -119281979 + AT_rich Low_complexity Low_complexity 1 22 0 2313 101 0 7 chr5 83804275 83804583 -119280949 + AluSx SINE Alu 6 311 -1 348 309 150 17 chr5 83804701 83804829 -119280703 + Charlie8 DNA MER1_type 9 119 -222 216 0 0 0 chr5 83804829 83804853 -119280679 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 348 309 150 17 chr5 83804853 83804957 -119280575 + Charlie8 DNA MER1_type 119 272 -69 1823 144 34 24 chr5 83806318 83806616 -119278916 - AluJb SINE Alu -11 301 1 236 167 21 42 chr5 83806976 83807024 -119278508 + L2 LINE L2 3244 3290 -23 183 80 0 0 chr5 83807034 83807059 -119278473 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 360 276 103 17 chr5 83807202 83807381 -119278151 + MIR SINE MIR 43 239 -23 25 0 0 0 chr5 83807453 83807478 -119278054 + AT_rich Low_complexity Low_complexity 1 25 0 285 247 21 10 chr5 83808219 83808316 -119277216 + (TA)n Simple_repeat Simple_repeat 1 98 0 514 261 100 6 chr5 83808432 83808612 -119276920 + MIR SINE MIR 53 249 -13 1879 195 34 37 chr5 83808659 83808701 -119276831 - MLT2D LTR ERVL -5 409 368 252 86 0 0 chr5 83808701 83808736 -119276796 + (TG)n Simple_repeat Simple_repeat 2 36 0 195 42 0 0 chr5 83808741 83808765 -119276767 + (GA)n Simple_repeat Simple_repeat 1 24 0 1879 195 34 37 chr5 83808765 83809126 -119276406 - MLT2D LTR ERVL -50 364 1 290 281 104 0 chr5 83809135 83809231 -119276301 - MIR SINE MIR -112 150 45 2183 131 0 10 chr5 83809297 83809611 -119275921 - AluSx SINE Alu 0 312 2 23 0 0 0 chr5 83809685 83809708 -119275824 + AT_rich Low_complexity Low_complexity 1 23 0 2047 128 7 3 chr5 83810122 83810419 -119275113 + AluSx SINE Alu 1 298 -14 241 102 61 0 chr5 83810419 83810468 -119275064 - L2 LINE L2 -553 2761 2710 2272 112 0 3 chr5 83811062 83811367 -119274165 - AluSq SINE Alu -7 306 3 232 316 143 8 chr5 83812734 83812867 -119272665 - MIR SINE MIR -51 211 61 180 0 0 0 chr5 83812992 83813012 -119272520 + (TTG)n Simple_repeat Simple_repeat 2 21 0 369 277 95 0 chr5 83813259 83813396 -119272136 - MIR SINE MIR 0 262 113 2197 89 41 0 chr5 83813705 83813998 -119271534 - AluSg SINE Alu -5 305 1 207 298 152 32 chr5 83814182 83814591 -119270941 + L2 LINE L2 2403 2860 -454 261 0 0 0 chr5 83814739 83814768 -119270764 + (TA)n Simple_repeat Simple_repeat 1 29 0 2657 49 0 3 chr5 83814768 83815076 -119270456 - AluY SINE Alu -4 307 1 221 319 44 44 chr5 83816146 83816259 -119269273 + L2 LINE L2 3160 3272 0 454 279 108 0 chr5 83816424 83816582 -119268950 - MIR SINE MIR -32 230 56 315 273 189 8 chr5 83816811 83816943 -119268589 - MIR3 SINE MIR -9 199 44 1937 150 3 3 chr5 83817055 83817355 -119268177 + AluJo SINE Alu 5 304 -8 400 138 15 0 chr5 83817701 83817766 -119267766 - FRAM/FAM SINE Alu -81 85 20 262 266 0 43 chr5 83817767 83817861 -119267671 - L2 LINE L2 -189 3083 2994 481 44 0 0 chr5 83817878 83817946 -119267586 - AluJb SINE Alu -4 308 241 999 212 11 0 chr5 83817947 83818136 -119267396 - AluJb SINE Alu -113 199 9 349 234 284 0 chr5 83818222 83818363 -119267169 + MER5A DNA MER1_type 1 181 -8 1919 135 39 14 chr5 83818373 83818655 -119266877 + AluJo SINE Alu 6 294 -18 2288 125 3 0 chr5 83819173 83819484 -119266048 - AluSx SINE Alu 0 312 1 265 307 132 0 chr5 83819511 83819625 -119265907 + L2 LINE L2 3144 3272 0 28 0 0 0 chr5 83820794 83820822 -119264710 + AT_rich Low_complexity Low_complexity 1 28 0 1729 177 0 31 chr5 83820828 83821150 -119264382 - AluJb SINE Alu 0 312 1 3461 146 70 154 chr5 83821150 83821408 -119264124 + MER21A LTR ERV1 15 293 -638 2367 92 3 0 chr5 83821408 83821701 -119263831 - AluSc SINE Alu -15 294 1 3461 146 70 154 chr5 83821701 83821846 -119263686 + MER21A LTR ERV1 293 449 -482 2224 121 7 0 chr5 83821846 83822151 -119263381 + AluSx SINE Alu 1 307 -5 2086 117 3 3 chr5 83822151 83822478 -119263054 + AluSp SINE Alu 1 327 0 3461 146 70 154 chr5 83822478 83822972 -119262560 + MER21A LTR ERV1 448 831 -100 2467 81 10 3 chr5 83822972 83823281 -119262251 - AluSq SINE Alu -2 311 1 3461 146 70 154 chr5 83823281 83823348 -119262184 + MER21A LTR ERV1 831 902 -29 439 317 36 78 chr5 83823481 83823762 -119261770 - L2 LINE L2 -2 3270 3002 2411 100 3 0 chr5 83823864 83824173 -119261359 + AluSg SINE Alu 1 310 0 835 141 25 0 chr5 83825226 83825347 -119260185 + FLAM_C SINE Alu 1 124 -19 303 28 0 0 chr5 83825348 83825384 -119260148 + (CA)n Simple_repeat Simple_repeat 2 37 0 1201 159 0 0 chr5 83826210 83826386 -119259146 + FRAM SINE Alu 1 174 -2 344 167 14 0 chr5 83826394 83826466 -119259066 + GA-rich Low_complexity Low_complexity 4 76 0 489 219 204 10 chr5 83826841 83827062 -119258470 - MLT1J LTR MaLR -192 319 11 2315 98 0 0 chr5 83827786 83828081 -119257451 + AluSx SINE Alu 1 295 -17 750 139 0 17 chr5 83828114 83828229 -119257303 - FLAM_C SINE Alu -10 133 21 885 196 79 117 chr5 83828370 83828455 -119257077 - MER21B LTR ERV1 -81 782 695 3720 154 111 0 chr5 83828455 83829103 -119256429 - MER72 LTR ERV1 0 722 3 885 196 79 117 chr5 83829103 83829486 -119256046 - MER21B LTR ERV1 -168 695 332 1460 92 5 5 chr5 83829514 83829709 -119255823 - AluSg/x SINE Alu -15 295 101 3380 61 11 7 chr5 83829709 83830152 -119255380 - LTR7 LTR ERV1 -5 445 1 2503 87 45 16 chr5 83830152 83830533 -119254999 - HERVH LTR ERV1 0 7713 7322 1426 130 19 0 chr5 83830531 83830747 -119254785 - HERVH LTR ERV1 -1894 5819 5600 * 4297 148 9 1 chr5 83830748 83831405 -119254127 - HERVH LTR ERV1 -2564 5149 4488 2854 97 53 27 chr5 83831407 83831882 -119253650 - HERVH LTR ERV1 -3720 3993 3507 1145 253 116 7 chr5 83833789 83834082 -119251450 + MLT1G LTR MaLR 3 327 -263 475 200 213 19 chr5 83834260 83834415 -119251117 + MLT1G LTR MaLR 304 488 -67 329 152 57 95 chr5 83834535 83834640 -119250892 - L1MEd LINE L1 -5986 133 33 230 280 143 23 chr5 83834788 83834963 -119250569 + L2 LINE L2 3108 3303 -10 189 0 0 0 chr5 83834963 83834984 -119250548 + (CA)n Simple_repeat Simple_repeat 2 22 0 3118 221 34 28 chr5 83835099 83835385 -119250147 - L1ME1 LINE L1 -3 6163 5880 1803 136 64 0 chr5 83835385 83835665 -119249867 - AluJb SINE Alu -14 298 1 3118 221 34 28 chr5 83835665 83836191 -119249341 - L1ME1 LINE L1 -286 5880 5346 214 354 0 0 chr5 83836224 83836289 -119249243 - L2 LINE L2 -86 3186 3122 795 188 0 0 chr5 83836289 83836422 -119249110 + FLAM_C SINE Alu 1 133 0 240 191 0 0 chr5 83836478 83836525 -119249007 + Alu SINE Alu 256 302 0 2474 70 3 0 chr5 83837971 83838272 -119247260 + AluY SINE Alu 1 302 -9 49 52 0 0 chr5 83838289 83838366 -119247166 + AT_rich Low_complexity Low_complexity 1 77 0 1517 161 62 36 chr5 83838456 83838761 -119246771 - MER44D DNA MER2_type -26 583 1 244 254 0 0 chr5 83838766 83838825 -119246707 - MLT1H1 LTR MaLR 0 555 497 241 333 0 13 chr5 83839148 83839226 -119246306 - MER5B DNA MER1_type -4 174 98 346 172 35 81 chr5 83839286 83839373 -119246159 + MER5B DNA MER1_type 92 174 -4 231 285 7 109 chr5 83839379 83839516 -119246016 + L2 LINE L2 3148 3270 -2 2098 126 67 14 chr5 83839582 83839938 -119245594 - THE1C LTR MaLR 0 375 1 10062 114 50 18 chr5 83839938 83841469 -119244063 - THE1C-int LTR MaLR 0 1580 2 1375 131 81 60 chr5 83841470 83841540 -119243992 - THE1C LTR MaLR 0 375 308 1750 144 19 0 chr5 83841540 83841810 -119243722 + AluSx SINE Alu 1 275 -37 216 0 0 0 chr5 83841816 83841840 -119243692 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1375 131 81 60 chr5 83841840 83842045 -119243487 - THE1C LTR MaLR -71 304 87 195 250 211 0 chr5 83843143 83843271 -119242261 + L3b LINE CR1 1249 1403 -180 22 0 0 0 chr5 83843317 83843339 -119242193 + AT_rich Low_complexity Low_complexity 1 22 0 319 224 147 9 chr5 83843445 83843561 -119241971 - L1ME4a LINE L1 -1 6120 5989 23 0 0 0 chr5 83844105 83844128 -119241404 + AT_rich Low_complexity Low_complexity 1 23 0 564 193 0 0 chr5 83844143 83844257 -119241275 + (TA)n Simple_repeat Simple_repeat 1 114 0 692 137 0 65 chr5 83844278 83844402 -119241130 - FLAM_C SINE Alu -25 118 3 540 252 0 0 chr5 83844841 83844972 -119240560 - Charlie2 DNA MER1_type -120 2742 2612 754 126 0 17 chr5 83845005 83845124 -119240408 + AluSg/x SINE Alu 193 309 0 1592 182 88 37 chr5 83845144 83845791 -119239741 - Charlie2 DNA MER1_type -281 2581 1857 459 194 115 65 chr5 83845899 83845981 -119239551 - Charlie2 DNA MER1_type -2713 149 56 2173 115 0 10 chr5 83845981 83846285 -119239247 + AluSx SINE Alu 1 301 -11 459 194 115 65 chr5 83846285 83846341 -119239191 - Charlie2 DNA MER1_type -2806 56 4 236 240 73 21 chr5 83846377 83846473 -119239059 + MIR SINE MIR 112 212 -50 621 148 70 17 chr5 83846671 83846786 -119238746 - THE1C LTR MaLR -254 121 1 1878 163 0 7 chr5 83847767 83848056 -119237476 + AluJb SINE Alu 1 287 -25 821 246 79 12 chr5 83848060 83848300 -119237232 - MIR SINE MIR 0 262 7 1298 173 95 153 chr5 83849957 83850472 -119235060 - MER31A LTR ERV1 0 485 1 1709 165 202 8 chr5 83850770 83851127 -119234405 - MSTB LTR MaLR 0 426 1 343 245 14 129 chr5 83851986 83852133 -119233399 - MER5A DNA MER1_type -53 136 7 218 317 97 43 chr5 83853786 83853958 -119231574 + MIR3 SINE MIR 30 210 -52 3239 172 9 14 chr5 83854395 83854440 -119231092 - MLT2B3 LTR ERVL 0 554 510 587 50 0 12 chr5 83854440 83854520 -119231012 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 3239 172 9 14 chr5 83854520 83854972 -119230560 - MLT2B3 LTR ERVL -44 510 58 2456 133 93 5 chr5 83854972 83855369 -119230163 + MSTB1 LTR MaLR 1 432 0 3239 172 9 14 chr5 83855369 83855427 -119230105 - MLT2B3 LTR ERVL -496 58 1 273 252 72 36 chr5 83856277 83856416 -119229116 + L2 LINE L2 3108 3251 -62 3482 178 50 9 chr5 83856417 83857056 -119228476 + ERVL LTR ERVL 1552 2216 -3548 334 132 0 0 chr5 83857421 83857474 -119228058 - Alu SINE Alu 0 302 250 189 202 37 128 chr5 83857669 83857857 -119227675 + MIR SINE MIR 60 230 -32 23 24 0 24 chr5 83859713 83859731 -119225801 + AT_rich Low_complexity Low_complexity 1 18 -22 924 74 41 0 chr5 83859731 83859852 -119225680 + L1PA13 LINE L1 6030 6155 -8 23 24 0 24 chr5 83859852 83859874 -119225658 + AT_rich Low_complexity Low_complexity 18 40 0 183 42 0 0 chr5 83860465 83860489 -119225043 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1014 200 0 16 chr5 83861184 83861369 -119224163 - AluJo SINE Alu -130 182 1 2644 48 7 0 chr5 83862163 83862472 -119223060 + AluY SINE Alu 1 311 0 782 254 36 65 chr5 83862668 83862916 -119222616 - MIR SINE MIR -21 241 1 1615 152 58 13 chr5 83863143 83863453 -119222079 + MER33 DNA MER1_type 1 324 0 247 277 36 0 chr5 83863717 83863800 -119221732 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 348 64 0 0 chr5 83865570 83865617 -119219915 + (TG)n Simple_repeat Simple_repeat 2 48 0 1044 203 28 42 chr5 83866200 83866417 -119219115 - MER20 DNA MER1_type -5 214 1 231 349 84 0 chr5 83867088 83867171 -119218361 - L2 LINE L2 -25 3288 3199 583 157 88 0 chr5 83868085 83868187 -119217345 - FRAM SINE Alu -32 144 34 185 0 0 39 chr5 83868272 83868298 -119217234 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr5 83868622 83868650 -119216882 + AT_rich Low_complexity Low_complexity 1 28 0 3154 202 82 14 chr5 83870560 83871259 -119214273 - MER21B LTR ERV1 -54 809 64 312 27 0 0 chr5 83871889 83871926 -119213606 + (TG)n Simple_repeat Simple_repeat 2 38 0 200 247 96 55 chr5 83872715 83872788 -119212744 - MER91A DNA MER1_type 0 196 121 192 200 0 0 chr5 83872869 83872909 -119212623 + T-rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr5 83873713 83873748 -119211784 + AT_rich Low_complexity Low_complexity 1 35 0 329 280 45 15 chr5 83873755 83873887 -119211645 + L1ME3 LINE L1 6016 6151 -11 242 321 25 0 chr5 83873931 83874012 -119211520 + MER5B DNA MER1_type 49 131 -47 2863 141 85 14 chr5 83874019 83874515 -119211017 - L1MA9 LINE L1 0 6312 5782 5339 173 44 3 chr5 83874568 83875592 -119209940 - L1MA9 LINE L1 -1096 5050 3985 306 167 19 0 chr5 83875592 83875646 -119209886 + MER5B DNA MER1_type 117 171 -7 536 181 0 0 chr5 83876943 83877026 -119208506 + AluJ/FLAM SINE Alu 2 84 -228 332 263 53 15 chr5 83878495 83878628 -119206904 + MIR SINE MIR 2 139 -123 575 262 22 41 chr5 83878628 83878899 -119206633 + L1MC3 LINE L1 5593 5858 -1927 * 2849 60 0 0 chr5 83878667 83879019 -119206513 + L1PA8 LINE L1 5627 5978 -194 204 219 122 0 chr5 83879214 83879255 -119206277 + L2 LINE L2 3210 3255 -17 237 222 0 0 chr5 83880339 83880384 -119205148 - L2 LINE L2 -14 3258 3214 650 226 0 7 chr5 83880519 83880656 -119204876 - Charlie4 DNA MER1_type -18 1943 1808 1496 130 0 14 chr5 83880835 83881051 -119204481 + AluSq SINE Alu 1 213 -100 21 0 0 0 chr5 83881061 83881082 -119204450 + AT_rich Low_complexity Low_complexity 1 21 0 566 274 73 42 chr5 83881101 83881442 -119204090 - MLT1J LTR MaLR -36 475 88 497 198 54 9 chr5 83881585 83881696 -119203836 - LTR67 LTR ERVL -14 543 428 1777 192 166 19 chr5 83882449 83882912 -119202620 + L1MD1 LINE L1 5473 6003 -239 249 179 48 24 chr5 83883018 83883102 -119202430 + (CATATA)n Simple_repeat Simple_repeat 5 90 0 22 56 0 0 chr5 83883134 83883170 -119202362 + AT_rich Low_complexity Low_complexity 1 36 0 35 0 0 0 chr5 83883237 83883272 -119202260 + AT_rich Low_complexity Low_complexity 1 35 0 272 250 10 31 chr5 83883336 83883432 -119202100 + FRAM SINE Alu 53 146 -20 634 23 0 23 chr5 83883434 83883520 -119202012 + (TA)n Simple_repeat Simple_repeat 1 84 0 1340 195 115 49 chr5 83883765 83884113 -119201419 - MLT1A2 LTR MaLR 0 374 4 638 193 14 146 chr5 83886365 83886515 -119199017 + MER5A DNA MER1_type 1 117 -72 1788 165 3 30 chr5 83886515 83886818 -119198714 - AluJo SINE Alu -15 297 3 638 193 14 146 chr5 83886818 83886879 -119198653 + MER5A DNA MER1_type 117 184 -5 21 36 0 0 chr5 83888442 83888470 -119197062 + AT_rich Low_complexity Low_complexity 1 28 0 257 167 0 121 chr5 83889134 83889162 -119196370 - L2 LINE L2 0 3272 3255 2204 119 7 0 chr5 83889162 83889457 -119196075 + AluSx SINE Alu 1 297 -15 257 167 0 121 chr5 83889457 83889494 -119196038 - L2 LINE L2 -17 3255 3215 2536 142 24 0 chr5 83889506 83889887 -119195645 + MLT1B LTR MaLR 1 390 0 240 111 0 0 chr5 83891423 83891468 -119194064 + (TG)n Simple_repeat Simple_repeat 2 46 0 624 27 0 0 chr5 83892123 83892197 -119193335 + (CA)n Simple_repeat Simple_repeat 2 75 0 207 0 0 0 chr5 83892836 83892859 -119192673 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 283 336 7 115 chr5 83892872 83893158 -119192374 - L2 LINE L2 -62 3210 2956 558 170 45 0 chr5 83893243 83893355 -119192177 + MER3 DNA MER1_type 48 164 -45 * 1697 169 66 8 chr5 83893351 83893717 -119191815 + MER3 DNA MER1_type 2238 2624 0 208 315 146 11 chr5 83893727 83893816 -119191716 + L2 LINE L2 3200 3300 -13 738 274 167 25 chr5 83893891 83894494 -119191038 - L2 LINE L2 -21 3292 2610 203 118 0 29 chr5 83894928 83894962 -119190570 - L2 LINE L2 -11 3261 3229 * 263 297 36 9 chr5 83894935 83895046 -119190486 - MIR SINE MIR -12 250 137 1780 146 70 3 chr5 83895068 83895355 -119190177 - AluJo SINE Alu -5 307 2 229 256 81 23 chr5 83895401 83895487 -119190045 + MIR3 SINE MIR 4 94 -114 283 284 0 14 chr5 83895544 83895618 -119189914 + MER5A DNA MER1_type 1 73 -116 637 121 0 0 chr5 83895620 83895703 -119189829 + AluSc SINE Alu 2 84 -225 209 33 33 0 chr5 83896169 83896199 -119189333 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 1811 64 0 9 chr5 83896923 83897142 -119188390 + AluSc SINE Alu 71 287 -22 828 296 93 21 chr5 83897333 83897708 -119187824 - LTR16C LTR ERVL 0 491 90 1746 216 67 60 chr5 83898209 83898747 -119186785 + MLT1F LTR MaLR 1 542 0 2908 260 116 75 chr5 83898862 83899773 -119185759 + HAL1 LINE L1 94 967 -1540 336 48 0 0 chr5 83899773 83899815 -119185717 + (CA)n Simple_repeat Simple_repeat 2 43 0 2908 260 116 75 chr5 83899815 83900893 -119184639 + HAL1 LINE L1 967 2163 -344 2094 144 24 44 chr5 83900905 83901288 -119184244 - THE1C LTR MaLR 0 375 1 1328 129 10 15 chr5 83901295 83901496 -119184036 + MSTB1 LTR MaLR 34 233 -199 1920 141 28 0 chr5 83901496 83901787 -119183745 - AluSx SINE Alu -13 299 1 14912 24 0 0 chr5 83904131 83906626 -119178906 + L1PA3 LINE L1 3672 6166 0 699 133 0 62 chr5 83906678 83906806 -119178726 - L1MA7 LINE L1 -10 6281 6162 390 186 0 0 chr5 83906806 83906876 -119178656 + L1MA7 LINE L1 6020 6089 -202 2165 111 0 0 chr5 83907239 83907527 -119178005 - AluSx SINE Alu 0 312 25 328 344 111 36 chr5 83907997 83908250 -119177282 - L1ME LINE L1 -393 5769 5498 739 298 68 4 chr5 83909124 83909359 -119176173 + MIR SINE MIR 6 255 -7 294 73 0 0 chr5 83909973 83910014 -119175518 + (GA)n Simple_repeat Simple_repeat 2 42 0 416 250 11 0 chr5 83911321 83911409 -119174123 + Charlie8 DNA MER1_type 32 120 -2297 280 224 15 15 chr5 83911409 83911476 -119174056 + L1ME LINE L1 5551 5617 -549 1138 202 38 5 chr5 83911980 83912193 -119173339 - MER58A DNA MER1_type 0 224 5 3036 84 0 11 chr5 83912703 83913082 -119172450 - THE1C LTR MaLR 0 375 1 188 133 0 0 chr5 83913719 83913749 -119171783 + L2 LINE L2 2944 2973 -340 2191 121 0 0 chr5 83913884 83914181 -119171351 + AluSc SINE Alu 1 297 -12 1913 164 0 22 chr5 83914948 83915265 -119170267 - AluJb SINE Alu -2 310 1 830 281 92 65 chr5 83918174 83918575 -119166957 + L2 LINE L2 2808 3226 -87 898 226 6 0 chr5 83918575 83918739 -119166793 + FAM SINE Alu 1 165 -10 830 281 92 65 chr5 83918739 83918829 -119166703 + L2 LINE L2 3226 3312 -1 339 195 155 75 chr5 83919123 83919297 -119166235 + MIR3 SINE MIR 18 205 -3 318 312 13 0 chr5 83919491 83919568 -119165964 + L2 LINE L2 3193 3270 -2 567 281 148 0 chr5 83919840 83920036 -119165496 - MIR SINE MIR -19 243 19 387 171 349 23 chr5 83920085 83920214 -119165318 - MER5A DNA MER1_type 0 189 19 1353 222 31 19 chr5 83920245 83920385 -119165147 - MER33 DNA MER1_type -2261 324 187 2168 98 7 0 chr5 83920385 83920672 -119164860 - AluSc SINE Alu -11 298 10 1353 222 31 19 chr5 83920672 83920851 -119164681 - MER33 DNA MER1_type -2398 187 1 1485 174 23 114 chr5 83921165 83921561 -119163971 - MLT1A1 LTR MaLR 0 365 6 269 329 108 28 chr5 83922282 83922568 -119162964 + L3b LINE CR1 1112 1420 -163 349 286 86 9 chr5 83925540 83925645 -119159887 - MIR SINE MIR -137 125 13 622 133 0 0 chr5 83926149 83926232 -119159300 - FRAM SINE Alu -17 159 77 351 0 0 0 chr5 83926238 83926277 -119159255 + (TTA)n Simple_repeat Simple_repeat 2 40 0 817 149 8 0 chr5 83926277 83926398 -119159134 - FLAM_C SINE Alu -21 122 1 2377 105 0 0 chr5 83927711 83928015 -119157517 + AluSx SINE Alu 1 304 -8 2319 93 0 16 chr5 83928428 83928738 -119156794 + AluSq SINE Alu 2 306 -7 209 246 118 36 chr5 83929308 83929418 -119156114 - L2 LINE L2 -1 3312 3194 411 145 53 0 chr5 83929492 83929568 -119155964 + AluJ/FRAM SINE Alu 226 305 -7 731 276 78 30 chr5 83929848 83930181 -119155351 - LTR16B LTR ERVL 0 464 116 1169 158 70 84 chr5 83930601 83930934 -119154598 - MLT1A1 LTR MaLR -4 424 49 2994 118 21 14 chr5 83930934 83931359 -119154173 - MSTA LTR MaLR 0 428 1 1169 158 70 84 chr5 83931359 83931392 -119154140 - MLT1A1 LTR MaLR -379 49 17 553 212 30 23 chr5 83931980 83932112 -119153420 - MER21B LTR ERV1 -646 217 85 1238 183 56 74 chr5 83932131 83932298 -119153234 - AluJo SINE Alu -32 280 119 183 42 0 0 chr5 83932298 83932322 -119153210 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1238 183 56 74 chr5 83932322 83932439 -119153093 - AluJo SINE Alu -193 119 1 367 171 186 0 chr5 83932442 83932512 -119153020 - MER21B LTR ERV1 -767 96 14 262 265 20 61 chr5 83932847 83932994 -119152538 + L1ME LINE L1 5357 5497 -624 3708 202 71 24 chr5 83933157 83933260 -119152272 - L1MDa LINE L1 -4865 1675 1578 1713 171 241 12 chr5 83933260 83933674 -119151858 - LTR54 LTR ERV1 0 510 2 3708 202 71 24 chr5 83933674 83934929 -119150603 - L1MDa LINE L1 -4962 1578 35 246 365 103 0 chr5 83935102 83935228 -119150304 - L2 LINE L2 -219 3053 2915 2631 52 0 0 chr5 83935404 83935711 -119149821 + AluY SINE Alu 1 307 -4 218 305 51 42 chr5 83935778 83935896 -119149636 - L2 LINE L2 -782 2532 2414 288 289 114 0 chr5 83935996 83936110 -119149422 - L2 LINE L2 -945 2369 2243 1077 253 102 48 chr5 83936184 83936829 -119148703 - L2 LINE L2 -26 3287 2520 2073 124 0 20 chr5 83938386 83938685 -119146847 - AluSx SINE Alu -19 293 1 348 368 8 0 chr5 83939141 83939274 -119146258 + MIR3 SINE MIR 60 193 -15 308 259 12 12 chr5 83940203 83940288 -119145244 + L2 LINE L2 3168 3252 -61 216 0 0 0 chr5 83940289 83940313 -119145219 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 324 262 55 48 chr5 83940580 83940725 -119144807 + MIR3 SINE MIR 16 161 -47 * 543 228 142 15 chr5 83940709 83940912 -119144620 - MIR SINE MIR -32 230 3 288 0 0 0 chr5 83941321 83941353 -119144179 + (CA)n Simple_repeat Simple_repeat 1 32 0 563 201 37 101 chr5 83942448 83942637 -119142895 + MER5B DNA MER1_type 1 177 -1 245 333 50 81 chr5 83942853 83943174 -119142358 + L2 LINE L2 2961 3271 -1 213 39 0 0 chr5 83943572 83943598 -119141934 + (CA)n Simple_repeat Simple_repeat 2 27 0 1868 150 7 3 chr5 83943677 83943963 -119141569 + AluJb SINE Alu 1 287 -25 195 339 0 0 chr5 83944031 83944087 -119141445 - MIR SINE MIR 0 262 207 2440 95 0 0 chr5 83944267 83944571 -119140961 + AluSg SINE Alu 1 304 -6 23 33 0 0 chr5 83944810 83944840 -119140692 + AT_rich Low_complexity Low_complexity 1 30 0 1823 155 3 25 chr5 83945258 83945575 -119139957 + AluJb SINE Alu 1 310 -2 859 111 0 8 chr5 83946159 83946276 -119139256 + FLAM_C SINE Alu 1 116 -27 2262 130 114 16 chr5 83946300 83946730 -119138802 + L1MC2 LINE L1 5873 6344 0 2117 121 0 16 chr5 83947587 83947893 -119137639 + AluJb SINE Alu 1 301 -11 21 36 0 0 chr5 83947937 83947965 -119137567 + AT_rich Low_complexity Low_complexity 1 28 0 6083 112 2 0 chr5 83948293 83949184 -119136348 + L1P LINE L1 4267 5159 -987 228 67 0 0 chr5 83950227 83950257 -119135275 + (TA)n Simple_repeat Simple_repeat 2 31 0 249 293 13 27 chr5 83950620 83950695 -119134837 + L3 LINE CR1 1502 1575 -2 191 0 103 0 chr5 83950773 83950802 -119134730 + A-rich Low_complexity Low_complexity 1 32 0 181 224 61 20 chr5 83951497 83951546 -119133986 - L2 LINE L2 -2838 476 426 1067 77 0 0 chr5 83951638 83951768 -119133764 + AluSg SINE Alu 2 131 -179 610 265 39 15 chr5 83951785 83951989 -119133543 - L1M4 LINE L1 -3353 2793 2585 1908 149 0 0 chr5 83952337 83952656 -119132876 + AluSx SINE Alu 1 319 0 190 333 105 0 chr5 83953710 83953767 -119131765 - L3 LINE CR1 -1507 70 8 195 176 0 0 chr5 83953877 83953911 -119131621 - L2 LINE L2 -16 3297 3264 666 172 117 12 chr5 83953969 83954132 -119131400 - MER53 DNA DNA -7 182 3 1043 174 5 41 chr5 83954136 83954332 -119131200 + MER20 DNA MER1_type 31 219 0 261 295 69 64 chr5 83955343 83955516 -119130016 - MER5A DNA MER1_type -13 176 3 248 295 62 39 chr5 83955572 83955701 -119129831 + L2 LINE L2 2925 3056 -216 22 0 0 0 chr5 83956009 83956031 -119129501 + AT_rich Low_complexity Low_complexity 1 22 0 269 103 51 0 chr5 83956040 83956079 -119129453 - MER57A LTR ERV1 -68 335 295 323 305 21 0 chr5 83956454 83956549 -119128983 + MIR SINE MIR 16 112 -150 2013 147 6 20 chr5 83956553 83956899 -119128633 - L1MB3 LINE L1 0 6183 5843 2196 104 0 0 chr5 83956900 83957211 -119128321 + AluSx SINE Alu 3 313 0 21622 154 22 76 chr5 83957477 83961853 -119123679 + L1P LINE L1 12 4151 -1995 353 130 0 0 chr5 83961953 83962007 -119123525 + Alu SINE Alu 248 301 0 2261 104 0 3 chr5 83962324 83962621 -119122911 + AluSg SINE Alu 1 296 -14 938 161 101 130 chr5 83963949 83964037 -119121495 + LTR56 LTR ERV1 4 93 -352 2065 110 17 0 chr5 83964037 83964327 -119121205 + AluSq SINE Alu 6 300 -13 938 161 101 130 chr5 83964327 83964570 -119120962 + LTR56 LTR ERV1 93 321 -124 2312 107 0 0 chr5 83964570 83964870 -119120662 + AluY SINE Alu 1 300 -11 938 161 101 130 chr5 83964870 83964991 -119120541 + LTR56 LTR ERV1 321 444 -1 4540 129 25 4 chr5 83965211 83965906 -119119626 + MER50 LTR ERV1 3 711 -23 2510 83 81 50 chr5 83965928 83965946 -119119586 - LTR23 LTR ERV1 -5 432 416 1670 139 48 74 chr5 83965946 83966255 -119119277 + AluJb SINE Alu 1 301 -11 2510 83 81 50 chr5 83966255 83966529 -119119003 - LTR23 LTR ERV1 -21 416 120 2234 95 0 0 chr5 83966529 83966834 -119118698 - AluSq SINE Alu 0 305 1 2510 83 81 50 chr5 83966834 83966958 -119118574 - LTR23 LTR ERV1 -317 120 1 809 159 15 8 chr5 83967581 83967713 -119117819 - FLAM_C SINE Alu 0 133 1 2105 135 0 10 chr5 83968548 83968852 -119116680 - AluSx SINE Alu -11 301 1 381 337 96 15 chr5 83968866 83969136 -119116396 - L1MB3 LINE L1 -377 5785 5494 346 237 59 34 chr5 83969864 83969982 -119115550 - L2 LINE L2 0 3313 3193 974 123 0 0 chr5 83969982 83970112 -119115420 + AluSq/x SINE Alu 2 131 -182 22 35 0 0 chr5 83970587 83970616 -119114916 + AT_rich Low_complexity Low_complexity 1 29 0 234 290 186 28 chr5 83971786 83971931 -119113601 - L3 LINE CR1 -18 1559 1392 596 182 0 58 chr5 83972119 83972240 -119113292 + MER5A DNA MER1_type 32 145 -44 523 189 0 11 chr5 83972377 83972472 -119113060 - AluJb SINE Alu -35 277 184 191 0 103 0 chr5 83973242 83973271 -119112261 + T-rich Low_complexity Low_complexity 1 32 0 249 293 13 27 chr5 83973349 83973424 -119112108 - L3 LINE CR1 -2 1575 1502 221 83 28 0 chr5 83973787 83973823 -119111709 + (TA)n Simple_repeat Simple_repeat 2 38 0 507 197 80 107 chr5 83974983 83975282 -119110250 - L1ME4a LINE L1 -74 6047 5757 231 167 0 0 chr5 83975313 83975355 -119110177 + T-rich Low_complexity Low_complexity 1 42 0 2489 77 0 0 chr5 83975856 83976167 -119109365 + AluY SINE Alu 1 311 0 527 150 62 53 chr5 83977079 83977192 -119108340 - AluJb SINE Alu -99 213 100 355 179 15 0 chr5 83977335 83977402 -119108130 - L1MDa LINE L1 -6438 102 35 230 371 79 0 chr5 83977583 83977672 -119107860 - L2 LINE L2 -219 3053 2958 2615 55 0 0 chr5 83977892 83978199 -119107333 + AluY SINE Alu 1 307 -4 189 287 70 35 chr5 83978266 83978381 -119107151 - L2 LINE L2 -782 2532 2414 7787 95 26 6 chr5 83982242 83983439 -119102093 - L1P LINE L1 -1562 4584 3364 654 85 121 21 chr5 83983442 83983583 -119101949 - AluSg/x SINE Alu -25 284 130 749 59 0 5 chr5 83983756 83983858 -119101674 - L1ME4a LINE L1 -579 5575 5478 752 156 15 30 chr5 83985077 83985212 -119100320 - FLAM_C SINE Alu 0 133 1 296 228 18 0 chr5 83986057 83986114 -119099418 - LTR40a LTR ERVL -459 60 3 1113 308 49 34 chr5 83986444 83986970 -119098562 - LTR67 LTR ERVL -8 549 16 1430 80 19 9 chr5 83987472 83987684 -119097848 + LTR7 LTR ERV1 235 448 -2 4523 112 48 47 chr5 83987686 83988985 -119096547 + HERVH LTR ERV1 1 1240 -6473 21 0 0 0 chr5 83989431 83989452 -119096080 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 83989868 83989898 -119095634 + AT_rich Low_complexity Low_complexity 1 30 0 284 229 64 64 chr5 83989956 83990096 -119095436 - HAL1 LINE L1 -122 2385 2246 2113 126 26 0 chr5 83990361 83990663 -119094869 - AluSq SINE Alu 0 313 4 1998 128 14 3 chr5 83991872 83992169 -119093363 + AluSx SINE Alu 1 300 -12 314 211 171 0 chr5 83993060 83993136 -119092396 - L2 LINE L2 0 3313 3225 1043 282 50 17 chr5 83993370 83993834 -119091698 - L1M4 LINE L1 -3207 2939 2461 2494 88 0 0 chr5 83994025 83994330 -119091202 - AluY SINE Alu -3 308 4 461 195 42 34 chr5 83994969 83995087 -119090445 - MLT1F1 LTR MaLR 0 567 449 734 119 34 0 chr5 83995192 83995310 -119090222 + HERVH LTR ERV1 3169 3290 -4423 * 3251 108 44 2 chr5 83995300 83995782 -119089750 + HERVH LTR ERV1 3492 3993 -3720 4056 149 20 0 chr5 83995784 83996433 -119089099 + HERVH LTR ERV1 4488 5149 -2564 1423 130 19 0 chr5 83996434 83996650 -119088882 + HERVH LTR ERV1 5600 5819 -1894 1362 112 128 0 chr5 83996648 83996906 -119088626 + HERVH LTR ERV1 7322 7612 -101 * 4279 156 35 16 chr5 83997149 83997943 -119087589 + L1 LINE L1 3535 4343 -1803 1673 158 52 8 chr5 83997943 83998287 -119087245 - MSTB LTR MaLR 0 426 3 4099 135 101 75 chr5 83998289 83998680 -119086852 + L1 LINE L1 4339 4718 -1428 2302 90 0 13 chr5 83998680 83998981 -119086551 + AluSc SINE Alu 1 297 -12 4099 135 101 75 chr5 83998981 83999549 -119085983 + L1 LINE L1 4718 5323 -823 2199 196 48 58 chr5 83999655 84000263 -119085269 - L1 LINE L1 -3211 3117 2516 1176 224 9 9 chr5 84000265 84000493 -119085039 - MER8 DNA MER2_type -2 237 10 4113 162 53 25 chr5 84000494 84001563 -119083969 - L1 LINE L1 -3803 2525 1097 435 83 0 0 chr5 84002530 84002590 -119082942 + (TG)n Simple_repeat Simple_repeat 1 60 0 22 35 0 0 chr5 84003211 84003240 -119082292 + AT_rich Low_complexity Low_complexity 1 29 0 3724 109 22 0 chr5 84003243 84003740 -119081792 - L1PA16 LINE L1 -9 6157 5650 345 24 0 0 chr5 84004039 84004081 -119081451 + (TG)n Simple_repeat Simple_repeat 2 43 0 630 248 130 40 chr5 84005290 84005589 -119079943 + MER46C DNA MER2_type 13 338 0 381 167 0 0 chr5 84006285 84006363 -119079169 + T-rich Low_complexity Low_complexity 1 78 0 990 120 24 18 chr5 84006412 84006579 -119078953 + HERV17 LTR ERV1 2972 3139 -5260 6189 96 28 8 chr5 84006588 84007444 -119078088 + HERV17 LTR ERV1 4082 4954 -3445 2004 89 35 46 chr5 84007437 84008096 -119077436 + HERV17 LTR ERV1 706 1487 -7139 * 4482 61 0 0 chr5 84008249 84008803 -119076729 + L1PA7 LINE L1 5594 6147 -7 5223 165 36 8 chr5 84009026 84010813 -119074719 + L1PA16 LINE L1 4102 5937 -229 3489 100 18 14 chr5 84012425 84012977 -119072555 + L1PB2 LINE L1 5596 6149 -2 2536 77 0 0 chr5 84013959 84014270 -119071262 + AluY SINE Alu 1 311 0 1276 160 39 5 chr5 84015175 84015381 -119070151 - AluJb SINE Alu -99 213 1 283 128 0 0 chr5 84015388 84015435 -119070097 - Alu SINE Alu 0 302 256 812 193 0 0 chr5 84015482 84015622 -119069910 - FLAM_C SINE Alu -3 140 1 214 354 0 0 chr5 84015622 84015687 -119069845 + L2 LINE L2 3122 3186 -86 1971 251 42 2 chr5 84015720 84016242 -119069290 + L1ME1 LINE L1 5346 5888 -278 231 194 0 0 chr5 84016244 84016280 -119069252 + Alu SINE Alu 1 36 -267 292 154 67 96 chr5 84016593 84016697 -119068835 + L1MEd LINE L1 33 133 -5986 2484 313 84 25 chr5 84016726 84018234 -119067298 - L2 LINE L2 -405 2909 1313 633 164 144 7 chr5 84018923 84019069 -119066463 - MLT1D LTR MaLR -317 188 23 4286 61 54 57 chr5 84019185 84019796 -119065736 - LTR66 LTR ERVL -1 609 1 2113 133 0 7 chr5 84019821 84020123 -119065409 + AluSx SINE Alu 1 300 -12 2346 100 0 13 chr5 84020128 84020439 -119065093 + AluSc SINE Alu 3 309 0 187 243 14 54 chr5 84020965 84021039 -119064493 + MIR SINE MIR 75 145 -63 36 23 0 0 chr5 84021352 84021395 -119064137 + AT_rich Low_complexity Low_complexity 1 43 0 1267 249 139 28 chr5 84021490 84021959 -119063573 - LTR33 LTR ERVL 0 521 1 6745 68 1 11 chr5 84022822 84024505 -119061027 + L1PA8A LINE L1 4450 6129 -2 870 176 0 0 chr5 84024589 84024731 -119060801 - FLAM_C SINE Alu -1 142 1 1503 193 6 39 chr5 84025034 84025345 -119060187 + AluJo SINE Alu 2 302 -10 1034 183 0 0 chr5 84025345 84025509 -119060023 + AluJo/FRAM SINE Alu 134 297 -15 227 278 46 121 chr5 84029009 84029182 -119056350 + MIR3 SINE MIR 23 182 -26 2162 108 0 3 chr5 84029241 84029528 -119056004 - AluSx SINE Alu -17 295 10 203 278 74 0 chr5 84030870 84030924 -119054608 - L2 LINE L2 -6 3307 3250 2146 113 0 48 chr5 84031316 84031627 -119053905 - AluSx SINE Alu -16 296 1 1505 218 63 47 chr5 84032836 84033262 -119052270 - MER63B DNA MER1_type -1 435 3 237 329 0 13 chr5 84034690 84034769 -119050763 + MER117 DNA MER1_type 2 79 -118 1796 221 87 32 chr5 84034939 84035431 -119050101 - MLT1L LTR MaLR -87 528 10 849 207 90 5 chr5 84035456 84035644 -119049888 - MER3 DNA MER1_type -4 205 2 7420 68 9 11 chr5 84035893 84037181 -119048351 - SVA Other Other -875 1386 181 2254 137 5 61 chr5 84037503 84037911 -119047621 - MLT1B LTR MaLR 0 390 6 2267 113 7 0 chr5 84039068 84039378 -119046154 - AluSx SINE Alu 0 312 1 1270 148 57 47 chr5 84039505 84039802 -119045730 - MER69 DNA AcHobo -42 2484 2185 2560 70 0 0 chr5 84039859 84040160 -119045372 + AluY SINE Alu 5 305 -6 1254 230 68 35 chr5 84040160 84040246 -119045286 - MER69 DNA AcHobo -2003 523 441 4214 128 9 3 chr5 84040246 84040877 -119044655 + MER41B LTR ERV1 1 635 0 1254 230 68 35 chr5 84040877 84041175 -119044357 - MER69 DNA AcHobo -2085 441 123 834 151 0 29 chr5 84041195 84041334 -119044198 - AluJo SINE Alu -177 135 1 2353 108 0 0 chr5 84041347 84041654 -119043878 - AluSq SINE Alu -6 307 1 661 195 73 0 chr5 84041679 84041802 -119043730 + FLAM_C SINE Alu 1 132 -11 565 205 25 25 chr5 84041815 84041937 -119043595 - MER69 DNA AcHobo -2404 122 1 429 335 42 23 chr5 84041939 84042154 -119043378 + MIR SINE MIR 31 249 -13 545 258 82 21 chr5 84043032 84043226 -119042306 + MIR SINE MIR 13 218 -44 256 179 0 54 chr5 84043241 84043297 -119042235 - L1MA9 LINE L1 -38 6274 6222 902 118 0 22 chr5 84043311 84043447 -119042085 - FLAM_C SINE Alu 0 133 1 509 274 132 0 chr5 84043449 84043646 -119041886 - L1M4 LINE L1 -950 5196 4974 1310 229 82 28 chr5 84043666 84044174 -119041358 + L1ME LINE L1 5173 5708 -462 1519 159 9 0 chr5 84044219 84044445 -119041087 + AluJb SINE Alu 58 285 -27 47 47 0 12 chr5 84044822 84044848 -119040684 + AT_rich Low_complexity Low_complexity 1 26 -59 2368 94 0 0 chr5 84044848 84045147 -119040385 + AluSp SINE Alu 1 299 -14 47 47 0 12 chr5 84045147 84045206 -119040326 + AT_rich Low_complexity Low_complexity 26 85 0 526 253 25 38 chr5 84045275 84045433 -119040099 - MIR SINE MIR -100 162 7 216 337 23 12 chr5 84045590 84045676 -119039856 - L2 LINE L2 -30 3242 3156 521 285 41 65 chr5 84045718 84045964 -119039568 - L2 LINE L2 -3 3269 3030 616 260 84 13 chr5 84046085 84046312 -119039220 - MIR SINE MIR 0 262 20 2041 181 70 2 chr5 84046439 84046842 -119038690 + MER63B DNA MER1_type 7 436 0 370 250 0 10 chr5 84047070 84047166 -119038366 + L2 LINE L2 3178 3272 0 778 293 22 60 chr5 84047382 84047829 -119037703 - LTR16A LTR ERVL -12 438 9 2088 125 10 3 chr5 84047861 84048164 -119037368 - AluSx SINE Alu -7 305 1 5262 111 24 25 chr5 84048179 84049017 -119036515 - L1MC1 LINE L1 -6 6327 5491 874 220 91 25 chr5 84049113 84049139 -119036393 + MIR SINE MIR 4 27 -235 2198 118 0 3 chr5 84049139 84049436 -119036096 + AluSg1 SINE Alu 1 296 -13 874 220 91 25 chr5 84049436 84049650 -119035882 + MIR SINE MIR 27 260 -2 2144 97 3 23 chr5 84049650 84049949 -119035583 + AluSx SINE Alu 1 293 -19 969 188 0 6 chr5 84050090 84050255 -119035277 - FRAM SINE Alu -12 164 1 360 300 88 35 chr5 84050990 84051154 -119034378 - L2 LINE L2 0 3313 3126 2269 109 0 0 chr5 84051154 84051448 -119034084 + AluSc SINE Alu 1 294 -15 360 300 88 35 chr5 84051448 84051566 -119033966 - L2 LINE L2 -187 3126 3016 1782 179 3 7 chr5 84051585 84051882 -119033650 + AluJb SINE Alu 1 296 -16 2228 104 0 0 chr5 84052352 84052657 -119032875 + AluSx SINE Alu 2 306 0 2188 154 45 8 chr5 84052738 84053120 -119032412 + MSTD LTR MaLR 1 396 0 1772 150 16 41 chr5 84053345 84053665 -119031867 - AluJo SINE Alu 0 312 1 762 303 114 16 chr5 84054054 84054440 -119031092 + L2 LINE L2 2890 3313 0 1128 86 7 0 chr5 84054547 84054686 -119030846 + AluSg SINE Alu 1 140 -170 210 37 0 0 chr5 84054725 84054752 -119030780 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2152 101 0 7 chr5 84054754 84055041 -119030491 - AluSg SINE Alu -25 285 1 2154 132 12 0 chr5 84055067 84055378 -119030154 + AluSx SINE Alu 1 310 -2 241 143 0 0 chr5 84055378 84055420 -119030112 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 644 211 67 133 chr5 84055570 84055916 -119029616 + Charlie8 DNA MER1_type 2 324 -2093 2123 137 0 6 chr5 84055910 84056224 -119029308 - AluSx SINE Alu 0 312 1 210 222 0 0 chr5 84057060 84057114 -119028418 + GA-rich Low_complexity Low_complexity 4 57 0 345 167 73 50 chr5 84057733 84057813 -119027719 + MIR SINE MIR 31 111 -97 808 221 121 57 chr5 84058029 84058449 -119027083 + LTR37B LTR ERV1 22 468 0 200 269 0 15 chr5 84059042 84059109 -119026423 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 342 193 9 37 chr5 84059118 84059227 -119026305 + (CATA)n Simple_repeat Simple_repeat 3 108 0 272 283 162 25 chr5 84059756 84059954 -119025578 - L3 LINE CR1 -9 1568 1344 347 172 5 0 chr5 84062065 84062149 -119023383 - HsTC2 DNA Tc2 -1811 87 2 905 185 23 23 chr5 84062202 84062418 -119023114 - MER65C LTR ERV1 0 461 246 33 0 0 0 chr5 84062770 84062803 -119022729 + AT_rich Low_complexity Low_complexity 1 33 0 1764 202 35 75 chr5 84062869 84063492 -119022040 + L1MC4 LINE L1 7445 8042 0 9534 186 14 3 chr5 84064940 84067272 -119018260 - L1P5 LINE L1 -549 5602 3248 1245 178 33 4 chr5 84067385 84067626 -119017906 + AluJo SINE Alu 50 297 -15 26 0 0 0 chr5 84067974 84068000 -119017532 + AT_rich Low_complexity Low_complexity 1 26 0 596 186 64 19 chr5 84071457 84071613 -119013919 - L1MB7 LINE L1 -129 6055 5893 6540 225 92 21 chr5 84071616 84073817 -119011715 - L1M4c LINE L1 -4635 2324 11 910 156 75 10 chr5 84074310 84074509 -119011023 - Tigger2a DNA MER2_type 0 444 233 1088 152 16 80 chr5 84074797 84075047 -119010485 - Tigger2a DNA MER2_type -200 234 1 384 274 26 26 chr5 84075621 84075738 -119009794 + L2 LINE L2 3197 3313 0 204 259 17 17 chr5 84075739 84075797 -119009735 + (TAAG)n Simple_repeat Simple_repeat 3 60 0 226 286 0 0 chr5 84076209 84076258 -119009274 + polypurine Low_complexity Low_complexity 3 51 0 24694 61 4 5 chr5 84076399 84079801 -119005731 - L1P LINE L1 -1354 4792 1393 1993 111 7 14 chr5 84080032 84080320 -119005212 - AluSg SINE Alu -12 298 13 2972 77 168 148 chr5 84080320 84081223 -119004309 + LTR12 LTR ERV1 57 714 0 18496 107 18 8 chr5 84081236 84084035 -119001497 + HERV9 LTR ERV1 40 2866 -5533 21 0 0 0 chr5 84084143 84084164 -119001368 + AT_rich Low_complexity Low_complexity 1 21 0 4321 187 11 11 chr5 84084264 84085351 -119000181 - L1PBb LINE L1 -3001 3202 2116 1209 134 35 28 chr5 84085342 84085626 -118999906 + L1PBa LINE L1 1801 2086 -4777 * 505 122 0 0 chr5 84085619 84085701 -118999831 + L1PBa LINE L1 2792 2873 -3990 * 3554 157 48 46 chr5 84085700 84086235 -118999297 - L1PBb LINE L1 -4142 2062 1529 901 55 0 0 chr5 84086235 84086345 -118999187 + AluY SINE Alu 190 299 -12 3554 157 48 46 chr5 84086345 84087365 -118998167 - L1PBb LINE L1 -4675 1529 442 250 277 0 0 chr5 84090726 84090791 -118994741 - MER57B-int LTR ERV1 -7239 298 234 1352 209 24 29 chr5 84090994 84091334 -118994198 - MER57B LTR ERV1 0 434 97 334 191 48 24 chr5 84091391 84091475 -118994057 + MER34C LTR ERV1 500 585 0 287 243 86 57 chr5 84091747 84091887 -118993645 + MER103 DNA DNA 22 165 -1 680 307 46 15 chr5 84092892 84093283 -118992249 - MARNA DNA Mariner -59 527 125 2754 77 3 10 chr5 84093577 84093965 -118991567 + L1PA8 LINE L1 5786 6170 -2 204 291 101 13 chr5 84094263 84094342 -118991190 + L2 LINE L2 3199 3284 -29 233 299 63 69 chr5 84094621 84094795 -118990737 + MLT1J LTR MaLR 4 176 -335 720 265 56 73 chr5 84095216 84095574 -118989958 - LTR33A LTR ERVL -169 354 3 180 0 0 0 chr5 84096883 84096903 -118988629 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 322 309 15 37 chr5 84097957 84098093 -118987439 + MER5B DNA MER1_type 1 133 -45 376 267 17 87 chr5 84098150 84098322 -118987210 - L3 LINE CR1 -105 1472 1313 258 306 181 60 chr5 84098335 84098855 -118986677 + L3 LINE CR1 678 1260 -317 2121 145 98 15 chr5 84099195 84099594 -118985938 - MSTB1 LTR MaLR 0 432 1 566 286 37 50 chr5 84099811 84100269 -118985263 - L1M4 LINE L1 -1010 5136 4685 542 154 91 0 chr5 84100278 84100388 -118985144 + L1MB1 LINE L1 6049 6168 0 2085 136 0 7 chr5 84100821 84101116 -118984416 - AluSg SINE Alu -17 293 1 2252 122 18 63 chr5 84101156 84101551 -118983981 + MER51B LTR ERV1 1 377 0 807 239 73 7 chr5 84102386 84102658 -118982874 + MER51B-int LTR ERV1 50 339 -6310 372 234 102 0 chr5 84102684 84102812 -118982720 + MER51B-int LTR ERV1 288 428 -7357 6853 105 11 19 chr5 84102982 84104047 -118981485 + MER11C LTR ERVK 1 1057 -14 5220 98 19 42 chr5 84104526 84105724 -118979808 + MER51B-int LTR ERV1 704 1718 -5178 357 202 167 0 chr5 84105728 84105812 -118979720 - LTR8 LTR ERV1 -438 253 156 8522 136 110 25 chr5 84105874 84107626 -118977906 + L1P LINE L1 11 1911 -4235 6880 67 3 5 chr5 84107745 84108982 -118976550 + L1PA6 LINE L1 4913 6149 -5 230 322 19 42 chr5 84109157 84109371 -118976161 + L1MEd LINE L1 1048 1256 -4863 686 139 9 0 chr5 84109506 84109621 -118975911 + 5S rRNA rRNA 6 121 0 7387 106 13 2 chr5 84109873 84111053 -118974479 + Harlequin LTR ERV1 1843 3984 -3221 5479 241 15 25 chr5 84111114 84112615 -118972917 + Harlequin LTR ERV1 5162 6646 -3 1658 177 91 34 chr5 84112617 84113082 -118972450 + LTR10A LTR ERV1 1 548 -61 229 347 120 13 chr5 84113181 84113331 -118972201 + L2 LINE L2 2344 2509 -805 1331 186 69 82 chr5 84113427 84114152 -118971380 - LTR1B LTR ERV1 -39 816 1 2351 74 50 17 chr5 84114270 84115163 -118970369 - MER11A LTR ERVK 0 1266 251 198 157 157 0 chr5 84116264 84116315 -118969217 + MIR SINE MIR 81 139 -123 229 229 19 0 chr5 84116760 84116865 -118968667 + (CAAGG)n Simple_repeat Simple_repeat 2 108 0 1022 220 0 11 chr5 84117774 84117960 -118967572 - MER5A DNA MER1_type -5 184 1 236 257 27 40 chr5 84118528 84118602 -118966930 - MIR SINE MIR -34 228 156 952 175 7 0 chr5 84118716 84118870 -118966662 + FRAM SINE Alu 2 156 -10 183 327 30 20 chr5 84119018 84119119 -118966413 + L3 LINE CR1 1433 1534 -43 2376 49 0 43 chr5 84119534 84119839 -118965693 - AluY SINE Alu -18 293 2 28 0 0 0 chr5 84119890 84119918 -118965614 + AT_rich Low_complexity Low_complexity 1 28 0 291 268 12 24 chr5 84119984 84120066 -118965466 + MIR SINE MIR 25 105 -157 571 258 33 50 chr5 84120175 84120357 -118965175 + MIR SINE MIR 41 219 -43 262 343 77 7 chr5 84121195 84121338 -118964194 - MIR3 SINE MIR -3 205 53 2027 151 33 41 chr5 84122104 84122653 -118962879 + MLT2A2 LTR ERVL 1 553 -1 281 313 61 35 chr5 84123091 84123206 -118962326 + MIR3 SINE MIR 6 123 -85 301 189 56 22 chr5 84123483 84123573 -118961959 + L1MCa LINE L1 2326 2418 -4008 226 311 76 0 chr5 84123691 84123823 -118961709 - L1M4 LINE L1 -1968 4178 4037 3073 105 40 10 chr5 84123907 84124387 -118961145 + L1PA10 LINE L1 3680 4177 -1969 1808 156 0 0 chr5 84124387 84124657 -118960875 + AluSx SINE Alu 5 274 -38 3073 105 40 10 chr5 84124657 84124672 -118960860 + L1PA10 LINE L1 4177 4190 -1956 360 117 39 13 chr5 84124676 84124753 -118960779 + GA-rich Low_complexity Low_complexity 3 81 0 6979 138 21 0 chr5 84124755 84126784 -118958748 + L1PA10 LINE L1 4147 6163 -5 252 119 85 0 chr5 84126796 84126855 -118958677 - L1M4 LINE L1 -2206 3940 3877 1687 176 28 3 chr5 84127223 84127512 -118958020 - AluJb SINE Alu -16 296 1 581 231 54 65 chr5 84127673 84127933 -118957599 - L1M4 LINE L1 -2921 3225 2969 22 35 0 0 chr5 84127969 84127998 -118957534 + AT_rich Low_complexity Low_complexity 1 29 0 3710 100 19 109 chr5 84128345 84129042 -118956490 - MER51A LTR ERV1 0 634 1 602 235 46 32 chr5 84129221 84129438 -118956094 - L1ME2 LINE L1 -23 6141 5922 2436 74 0 0 chr5 84129439 84129737 -118955795 - AluY SINE Alu -13 298 1 761 180 0 0 chr5 84129797 84129919 -118955613 - FAM SINE Alu -63 122 1 1402 227 81 7 chr5 84129926 84130336 -118955196 - L1ME2 LINE L1 -345 5819 5380 47 19 0 0 chr5 84131619 84131673 -118953859 + AT_rich Low_complexity Low_complexity 1 54 0 290 260 0 14 chr5 84131736 84131809 -118953723 + MER58 DNA MER1_type 21 92 -2328 189 74 0 0 chr5 84131811 84131838 -118953694 + (T)n Simple_repeat Simple_repeat 1 27 0 406 171 0 0 chr5 84131851 84131927 -118953605 + MER58 DNA MER1_type 2345 2420 0 1368 158 58 17 chr5 84132951 84133243 -118952289 + MER68 LTR ERV1 2 305 -257 381 50 50 0 chr5 84133628 84133688 -118951844 + L1P1 LINE L1 5709 5771 -384 2577 125 38 61 chr5 84133983 84134880 -118950652 + L1P4 LINE L1 4766 5642 -532 4981 93 6 3 chr5 84134998 84135698 -118949834 + L1PA11 LINE L1 5472 6173 -1 812 246 46 8 chr5 84135729 84136019 -118949513 + LTR16A LTR ERVL 108 443 -7 674 281 21 50 chr5 84137319 84137561 -118947971 + MIR SINE MIR 3 237 -25 195 210 65 81 chr5 84137650 84137712 -118947820 + MIR SINE MIR 90 150 -112 460 291 30 59 chr5 84137793 84137996 -118947536 - MIR SINE MIR -25 237 41 233 304 10 29 chr5 84138430 84138532 -118947000 + MER119 DNA MER1_type 4 103 -480 378 254 44 0 chr5 84138550 84138664 -118946868 + MER119 DNA MER1_type 460 578 -5 1405 161 50 32 chr5 84138703 84138982 -118946550 - AluJo SINE Alu -28 284 1 3123 58 10 5 chr5 84139191 84139602 -118945930 - L1PA5 LINE L1 0 6154 5742 259 288 235 39 chr5 84139799 84139952 -118945580 - L2 LINE L2 -25 3288 3106 770 297 130 32 chr5 84140321 84140759 -118944773 - L2 LINE L2 -588 2726 2246 1129 191 9 5 chr5 84140929 84141144 -118944388 + MER58A DNA MER1_type 1 216 -8 398 298 31 38 chr5 84141312 84141517 -118944015 - MIR SINE MIR -20 242 7 266 227 72 10 chr5 84142760 84142857 -118942675 + L2 LINE L2 790 892 -2422 21 36 0 0 chr5 84142873 84142901 -118942631 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 84143191 84143214 -118942318 + AT_rich Low_complexity Low_complexity 1 23 0 329 326 139 14 chr5 84144337 84144552 -118940980 + MIR SINE MIR 21 262 0 28 0 0 0 chr5 84145578 84145606 -118939926 + AT_rich Low_complexity Low_complexity 1 28 0 4689 39 4 0 chr5 84145772 84146334 -118939198 + L1PA5 LINE L1 5583 6146 -8 22 0 0 0 chr5 84146337 84146359 -118939173 + AT_rich Low_complexity Low_complexity 1 22 0 457 319 104 15 chr5 84146691 84147231 -118938301 + HAL1b LINE L1 58 645 -703 447 324 70 54 chr5 84147502 84147875 -118937657 + L1MEc LINE L1 30 408 -5988 307 222 119 13 chr5 84147925 84148075 -118937457 + MLT1H1 LTR MaLR 249 440 -115 771 232 11 6 chr5 84148625 84148802 -118936730 - HERVL68 LTR ERVL -1431 1606 1429 1641 136 32 47 chr5 84149115 84149418 -118936114 - AluJb SINE Alu 0 305 7 5825 119 193 89 chr5 84149818 84151354 -118934178 - pTR5 LTR ERV1 0 2438 743 1222 105 42 0 chr5 84152251 84152442 -118933090 - L1PA13 LINE L1 -5 6158 5960 32 26 0 0 chr5 84154403 84154442 -118931090 + AT_rich Low_complexity Low_complexity 1 39 0 1866 133 0 0 chr5 84154708 84154978 -118930554 + AluSx SINE Alu 41 310 -2 403 187 0 27 chr5 84156024 84156099 -118929433 + L2 LINE L2 3240 3312 -1 942 309 75 114 chr5 84156927 84157913 -118927619 + L2 LINE L2 1973 2920 -394 418 220 101 9 chr5 84157948 84158057 -118927475 - MIR SINE MIR -79 183 65 209 216 0 20 chr5 84158190 84158241 -118927291 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 21 0 0 0 chr5 84158677 84158698 -118926834 + AT_rich Low_complexity Low_complexity 1 21 0 247 241 35 0 chr5 84160387 84160445 -118925087 + GA-rich Low_complexity Low_complexity 3 62 0 461 136 207 77 chr5 84160795 84160964 -118924568 + LTR37A LTR ERV1 18 208 -218 1201 144 0 6 chr5 84161280 84161461 -118924071 + AluSg/x SINE Alu 118 297 -13 219 323 0 0 chr5 84161668 84161733 -118923799 + MIR3 SINE MIR 114 178 -30 265 363 9 18 chr5 84162310 84162423 -118923109 - L2 LINE L2 -4 3268 3157 734 32 0 11 chr5 84162739 84162833 -118922699 + (GAAA)n Simple_repeat Simple_repeat 4 96 0 45 55 0 0 chr5 84164371 84164444 -118921088 + AT_rich Low_complexity Low_complexity 1 73 0 292 314 220 5 chr5 84165260 84165451 -118920081 + MIR SINE MIR 20 251 -11 518 258 54 35 chr5 84166159 84166263 -118919269 + L1ME4a LINE L1 5852 5953 -168 2087 122 6 16 chr5 84166263 84166575 -118918957 + AluSx SINE Alu 1 309 -3 518 258 54 35 chr5 84166575 84166730 -118918802 + L1ME4a LINE L1 5953 6116 -5 21 36 0 0 chr5 84167252 84167280 -118918252 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 84167309 84167345 -118918187 + AT_rich Low_complexity Low_complexity 1 36 0 301 56 0 0 chr5 84168360 84168396 -118917136 - tRNA-Glu-GAG tRNA tRNA -38 37 2 1646 138 4 0 chr5 84168501 84168777 -118916755 - L1MA4 LINE L1 -11 6289 6013 237 346 39 37 chr5 84168803 84168996 -118916536 + MIR3 SINE MIR 10 200 -62 287 328 74 5 chr5 84170087 84170276 -118915256 + L1MEd LINE L1 600 801 -5318 361 292 200 15 chr5 84170319 84170514 -118915018 + L1ME3A LINE L1 5612 5842 -328 23 0 0 0 chr5 84170633 84170656 -118914876 + AT_rich Low_complexity Low_complexity 1 23 0 520 323 12 6 chr5 84170773 84170934 -118914598 + MLT1F LTR MaLR 3 164 -378 723 245 9 19 chr5 84171698 84171910 -118913622 + L1ME4a LINE L1 4702 4911 -1235 885 220 0 0 chr5 84171939 84172098 -118913434 - FRAM SINE Alu -17 159 1 885 218 86 32 chr5 84172110 84172519 -118913013 + L1MC5 LINE L1 7477 7907 -54 248 256 56 0 chr5 84172580 84172670 -118912862 + L1ME4a LINE L1 5773 5867 -254 4291 198 81 29 chr5 84172711 84174339 -118911193 + L1MCb LINE L1 3 1723 -4841 861 201 0 0 chr5 84174339 84174478 -118911054 + Tigger1 DNA MER2_type 1 139 -2279 1283 162 0 14 chr5 84174490 84174706 -118910826 + Tigger1 DNA MER2_type 2206 2418 0 492 114 25 0 chr5 84174706 84174785 -118910747 + L1MCb LINE L1 1722 1802 -4762 * 1339 169 27 22 chr5 84174784 84174807 -118910725 + L1MC2 LINE L1 5185 5206 -1138 8875 38 6 2 chr5 84174807 84175874 -118909658 + MER11C LTR ERVK 1 1071 0 1339 169 27 22 chr5 84175874 84176818 -118908714 + L1MC2 LINE L1 5206 6292 -52 276 152 167 0 chr5 84176968 84177034 -118908498 + L1ME4a LINE L1 6017 6093 -28 21 0 0 0 chr5 84177501 84177522 -118908010 + AT_rich Low_complexity Low_complexity 1 21 0 1785 173 7 19 chr5 84179351 84179658 -118905874 + AluJo SINE Alu 3 305 -7 213 94 0 0 chr5 84179667 84179699 -118905833 + (A)n Simple_repeat Simple_repeat 1 32 0 2681 153 17 73 chr5 84179766 84180239 -118905293 + L1MB1 LINE L1 5602 6035 -133 2371 88 0 3 chr5 84180239 84180536 -118904996 + AluSx SINE Alu 1 296 -16 2681 153 17 73 chr5 84180536 84180663 -118904869 + L1MB1 LINE L1 6035 6168 0 188 343 105 0 chr5 84180965 84181070 -118904462 - L2 LINE L2 -13 3300 3185 1648 259 70 94 chr5 84182174 84183313 -118902219 + L1M2b LINE L1 1 1952 -5257 2016 124 3 3 chr5 84183313 84183595 -118901937 + AluSx SINE Alu 1 282 -30 1648 259 70 94 chr5 84183595 84183901 -118901631 + L1M2b LINE L1 1952 2264 -4945 338 241 36 0 chr5 84183925 84184008 -118901524 + U13 snRNA snRNA 19 104 0 1930 126 19 13 chr5 84184122 84184432 -118901100 + AluSq SINE Alu 2 313 0 5709 108 30 12 chr5 84184432 84185355 -118900177 + L1MA5 LINE L1 5359 6298 -2 306 0 0 0 chr5 84185790 84185824 -118899708 + (A)n Simple_repeat Simple_repeat 1 34 0 1756 162 10 10 chr5 84186179 84186476 -118899056 - AluJo SINE Alu -15 297 1 314 266 93 29 chr5 84186600 84186739 -118898793 - L1ME LINE L1 -589 5532 5385 867 315 95 24 chr5 84186959 84187460 -118898072 + L2 LINE L2 2750 3313 0 2354 145 11 67 chr5 84187822 84187901 -118897631 + MSTC LTR MaLR 5 87 -341 2325 73 0 17 chr5 84187901 84188202 -118897330 + AluY SINE Alu 1 296 -15 2354 145 11 67 chr5 84188202 84188571 -118896961 + MSTC LTR MaLR 87 428 0 258 280 80 13 chr5 84188817 84188892 -118896640 - MIR SINE MIR -171 91 12 189 388 62 0 chr5 84188919 84188999 -118896533 + MIR SINE MIR 10 94 -168 312 236 28 0 chr5 84189415 84189487 -118896045 + MLT1I LTR MaLR 82 155 -254 1642 93 4 30 chr5 84189493 84189730 -118895802 + AluSg/x SINE Alu 65 295 -14 188 291 137 51 chr5 84190252 84190369 -118895163 - L2 LINE L2 -27 3286 3160 724 211 0 39 chr5 84191315 84191471 -118894061 - FRAM SINE Alu -22 154 5 316 198 23 47 chr5 84192327 84192413 -118893119 + LTR33A LTR ERVL 434 517 -6 249 33 0 0 chr5 84192506 84192536 -118892996 + (GA)n Simple_repeat Simple_repeat 2 31 0 2312 65 0 7 chr5 84192542 84192832 -118892700 - AluSc SINE Alu -13 296 9 1867 159 0 0 chr5 84193238 84193528 -118892004 + AluSx SINE Alu 18 307 -5 1492 165 4 12 chr5 84193586 84193835 -118891697 + AluJo SINE Alu 50 296 -16 338 298 82 34 chr5 84193896 84194104 -118891428 - MER112 DNA MER1_type -14 246 29 219 287 153 40 chr5 84196017 84196167 -118889365 + MER5A DNA MER1_type 18 184 -5 839 74 83 0 chr5 84196600 84196721 -118888811 + MER11A LTR ERVK 1 131 -1135 28 0 0 0 chr5 84198007 84198035 -118887497 + AT_rich Low_complexity Low_complexity 1 28 0 244 109 176 118 chr5 84199379 84199498 -118886034 - L1MC4 LINE L1 -105 7937 7812 959 194 44 6 chr5 84199555 84199735 -118885797 - MER5A DNA MER1_type 0 189 3 401 259 163 48 chr5 84199783 84199930 -118885602 - MER5A DNA MER1_type 0 189 26 316 241 103 0 chr5 84199925 84200012 -118885520 + MER5B DNA MER1_type 5 100 -78 * 2237 123 0 0 chr5 84200013 84200323 -118885209 + AluSx SINE Alu 1 310 -2 2328 178 17 5 chr5 84200401 84200822 -118884710 + MSTB LTR MaLR 1 426 0 281 216 54 40 chr5 84201094 84201168 -118884364 + L2 LINE L2 2397 2471 -843 382 260 110 0 chr5 84201168 84201185 -118884347 - L1MA10 LINE L1 -2 6332 6316 3327 194 63 48 chr5 84201185 84201409 -118884123 - L1ME1 LINE L1 -10 6156 5937 2252 99 10 3 chr5 84201409 84201711 -118883821 + AluSg SINE Alu 1 304 -6 3327 194 63 48 chr5 84201711 84202143 -118883389 - L1ME1 LINE L1 -229 5937 5483 1687 172 14 10 chr5 84202143 84202439 -118883093 - AluJb SINE Alu -15 297 1 3327 194 63 48 chr5 84202439 84202612 -118882920 - L1ME1 LINE L1 -683 5483 5314 679 187 7 7 chr5 84202651 84202806 -118882726 - L1MD3 LINE L1 -939 7056 6902 652 180 34 48 chr5 84202804 84203010 -118882522 + L1M4 LINE L1 5024 5226 -920 * 243 79 0 0 chr5 84203317 84203355 -118882177 + (A)n Simple_repeat Simple_repeat 1 38 0 2081 141 0 3 chr5 84203363 84203669 -118881863 + AluSx SINE Alu 1 305 -7 2184 105 0 30 chr5 84203872 84204176 -118881356 - AluSq SINE Alu -18 295 1 262 267 35 35 chr5 84204195 84204281 -118881251 + L2 LINE L2 2606 2691 -623 401 133 0 0 chr5 84204281 84204341 -118881191 - AluS SINE Alu -258 60 1 1250 129 0 10 chr5 84204662 84204676 -118880856 + AluSq SINE Alu 121 134 -179 2361 99 0 0 chr5 84204676 84204979 -118880553 + AluSq SINE Alu 1 303 -10 1250 129 0 10 chr5 84204979 84205157 -118880375 + AluSq SINE Alu 134 311 -2 505 204 68 23 chr5 84205510 84205618 -118879914 - MIR SINE MIR -58 204 87 2313 91 3 0 chr5 84205618 84205926 -118879606 + AluSg SINE Alu 1 309 -1 505 204 68 23 chr5 84205926 84205949 -118879583 - MIR SINE MIR -175 87 67 1809 199 0 6 chr5 84205993 84206305 -118879227 + AluJo SINE Alu 1 310 -2 2271 112 7 0 chr5 84206640 84206935 -118878597 - AluSq SINE Alu -16 297 1 520 296 114 45 chr5 84207269 84207671 -118877861 + MLT1K LTR MaLR 147 576 -12 561 285 108 14 chr5 84208279 84208493 -118877039 + MIR SINE MIR 29 262 0 2188 116 17 0 chr5 84210797 84211091 -118874441 - AluSx SINE Alu -13 299 1 344 259 9 56 chr5 84212478 84212586 -118872946 + L2 LINE L2 3207 3309 -4 761 142 92 21 chr5 84213470 84213611 -118871921 - AluJ SINE Alu -33 279 129 71 67 0 0 chr5 84213611 84213745 -118871787 + AT_rich Low_complexity Low_complexity 1 134 0 155 68 0 0 chr5 84213746 84214041 -118871491 + AT_rich Low_complexity Low_complexity 1 295 0 944 143 0 0 chr5 84214054 84214187 -118871345 - AluJ SINE Alu -179 133 1 2096 100 0 0 chr5 84214819 84215090 -118870442 + AluSx SINE Alu 29 299 -13 2330 83 10 0 chr5 84215256 84215556 -118869976 - AluY SINE Alu -8 303 1 2381 91 0 3 chr5 84215768 84216075 -118869457 + AluSg SINE Alu 3 308 -2 2056 102 3 61 chr5 84216370 84216683 -118868849 + AluSg SINE Alu 1 295 -15 316 188 29 0 chr5 84216685 84216754 -118868778 - MER103 DNA DNA -87 79 9 2362 87 7 0 chr5 84217715 84218013 -118867519 - AluSc SINE Alu -9 300 1 6133 135 51 36 chr5 84218037 84218428 -118867104 + Tigger3b DNA MER2_type 2 386 -2642 2090 135 3 0 chr5 84218428 84218725 -118866807 - AluSx SINE Alu -14 298 1 6133 135 51 36 chr5 84218725 84219450 -118866082 + Tigger3b DNA MER2_type 386 1140 -1888 2231 136 3 0 chr5 84219450 84219758 -118865774 - AluSx SINE Alu -3 309 1 6133 135 51 36 chr5 84219758 84219851 -118865681 + Tigger3b DNA MER2_type 1140 1230 -1 1792 149 30 20 chr5 84220524 84220826 -118864706 + AluJb SINE Alu 6 310 -2 990 303 194 19 chr5 84221103 84221398 -118864134 + L2 LINE L2 1874 2116 -1198 898 201 107 63 chr5 84221398 84221717 -118863815 - MER46C DNA MER2_type -2 336 4 990 303 194 19 chr5 84221717 84222196 -118863336 + L2 LINE L2 2116 2783 -531 378 75 0 0 chr5 84222196 84222249 -118863283 - MADE1 DNA Mariner -27 53 1 433 317 107 49 chr5 84222251 84222699 -118862833 + L2 LINE L2 2809 3282 -31 540 221 71 0 chr5 84222837 84222964 -118862568 - L2 LINE L2 -17 3296 3161 551 305 16 5 chr5 84223012 84223202 -118862330 + MLT1I LTR MaLR 218 409 0 271 259 12 12 chr5 84223406 84223487 -118862045 + L2 LINE L2 3171 3251 -62 241 343 80 55 chr5 84224880 84225081 -118860451 - L2 LINE L2 -1941 1373 1168 1436 128 132 14 chr5 84225352 84225633 -118859899 - MER44D DNA MER2_type -8 601 18 204 283 94 19 chr5 84225672 84225778 -118859754 + MIR SINE MIR 121 234 -28 2359 103 0 13 chr5 84226279 84226591 -118858941 - AluSx SINE Alu -4 308 1 865 142 0 8 chr5 84226875 84227009 -118858523 + FLAM_C SINE Alu 1 133 -10 24 32 0 0 chr5 84227009 84227040 -118858492 + AT_rich Low_complexity Low_complexity 1 31 0 1439 172 75 0 chr5 84227040 84227158 -118858374 + AluJo SINE Alu 1 109 -203 207 0 0 0 chr5 84227158 84227181 -118858351 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1439 172 75 0 chr5 84227181 84227341 -118858191 + AluJo SINE Alu 109 300 -12 24 53 0 0 chr5 84227373 84227411 -118858121 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 84228343 84228364 -118857168 + AT_rich Low_complexity Low_complexity 1 21 0 1411 139 171 19 chr5 84228432 84228690 -118856842 - AluJo SINE Alu -15 297 1 1173 125 0 18 chr5 84228877 84229045 -118856487 - AluJ SINE Alu -3 309 145 800 157 7 29 chr5 84229093 84229233 -118856299 - AluJ SINE Alu -171 141 5 1531 178 20 38 chr5 84229444 84229562 -118855970 + AluJo SINE Alu 1 119 -193 2264 98 3 7 chr5 84229562 84229858 -118855674 - AluSp SINE Alu -18 295 1 2227 115 7 0 chr5 84229858 84230161 -118855371 - AluSq SINE Alu -7 306 1 1531 178 20 38 chr5 84230161 84230334 -118855198 + AluJo SINE Alu 117 288 -24 195 139 0 0 chr5 84230334 84230370 -118855162 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2265 122 3 0 chr5 84230670 84230973 -118854559 + AluSx SINE Alu 1 304 -8 290 293 90 38 chr5 84231173 84231306 -118854226 - MER91A DNA MER1_type -7 189 50 962 151 0 35 chr5 84231356 84231528 -118854004 + FRAM SINE Alu 1 165 -11 2538 57 0 0 chr5 84231848 84232146 -118853386 - AluY SINE Alu -13 298 1 29 0 0 0 chr5 84233459 84233488 -118852044 + GC_rich Low_complexity Low_complexity 1 29 0 2353 100 0 0 chr5 84234092 84234393 -118851139 - AluSq SINE Alu -12 301 1 1985 152 73 44 chr5 84234442 84234806 -118850726 + MSTC LTR MaLR 1 380 -48 2050 111 31 3 chr5 84234806 84235094 -118850438 + AluSx SINE Alu 1 296 -16 1985 152 73 44 chr5 84235094 84235138 -118850394 + MSTC LTR MaLR 380 421 -7 5776 97 8 0 chr5 84235225 84236491 -118849041 - L1PA14 LINE L1 -3 6158 4868 731 216 238 19 chr5 84236500 84236769 -118848763 - HsTC2a DNA Tc2 -366 378 51 335 212 38 76 chr5 84236848 84236980 -118848552 - L1MEd LINE L1 -4881 1238 1112 365 296 66 84 chr5 84236985 84237364 -118848168 - L1MEd LINE L1 -5063 1056 685 250 154 0 0 chr5 84238140 84238179 -118847353 - MER4E LTR ERV1 -74 692 654 2185 99 7 0 chr5 84238990 84239274 -118846258 + AluSq SINE Alu 1 286 -27 180 231 58 0 chr5 84239346 84239398 -118846134 + MIR SINE MIR 91 145 -63 1906 159 7 3 chr5 84241135 84241425 -118844107 - AluJo SINE Alu -21 291 1 2337 86 0 0 chr5 84241904 84242194 -118843338 - AluSg SINE Alu -20 290 1 1738 140 8 72 chr5 84242693 84242713 -118842819 + MER46B DNA MER2_type 1 21 -2710 2377 88 3 0 chr5 84242713 84243018 -118842514 + AluSq SINE Alu 1 306 -7 1738 140 8 72 chr5 84243018 84243174 -118842358 + MER46B DNA MER2_type 21 17 -2714 2385 71 13 3 chr5 84243174 84243482 -118842050 + AluY SINE Alu 1 311 0 1738 140 8 72 chr5 84243482 84243690 -118841842 + MER46B DNA MER2_type 16 236 0 303 218 39 0 chr5 84244094 84244172 -118841360 + L1ME LINE L1 1296 1376 -5164 426 246 9 70 chr5 84244376 84244591 -118840941 + L1ME LINE L1 1591 1792 -4929 22 0 0 0 chr5 84244678 84244700 -118840832 + AT_rich Low_complexity Low_complexity 1 22 0 775 220 65 67 chr5 84244745 84244889 -118840643 + L1MC5 LINE L1 7179 7322 -639 2185 103 3 3 chr5 84244889 84245180 -118840352 + AluSx SINE Alu 4 294 -18 775 220 65 67 chr5 84245180 84245407 -118840125 + L1MC5 LINE L1 7322 7549 -412 1426 166 120 12 chr5 84245412 84245671 -118839861 + AluJb SINE Alu 1 287 -25 931 307 41 4 chr5 84245681 84246169 -118839363 + L1ME LINE L1 3750 4255 -2285 1005 261 26 32 chr5 84246192 84246556 -118838976 + L1ME LINE L1 5771 6134 -381 439 222 0 0 chr5 84246554 84246653 -118838879 + L1M4 LINE L1 4661 4759 -1387 * 1387 161 60 85 chr5 84246661 84246977 -118838555 + AluJb SINE Alu 5 312 0 1028 48 0 62 chr5 84246981 84247126 -118838406 + L1PA7 LINE L1 6003 6138 -16 2197 81 17 7 chr5 84247134 84247430 -118838102 + AluY SINE Alu 1 299 -12 892 198 0 47 chr5 84247431 84247663 -118837869 + L1M4 LINE L1 4876 5096 -1050 684 228 11 0 chr5 84247776 84247965 -118837567 + L1M4 LINE L1 5104 5294 -852 2570 102 3 0 chr5 84247968 84248332 -118837200 + L1P3 LINE L1 1 365 -6096 * 12522 117 1 5 chr5 84248328 84250346 -118835186 + L1P3 LINE L1 1406 3416 -3045 635 114 4 197 chr5 84250456 84250720 -118834812 + L1P3 LINE L1 3459 3671 -2790 2142 95 17 7 chr5 84250805 84251100 -118834432 + AluY SINE Alu 1 298 -13 1712 104 0 4 chr5 84251554 84251826 -118833706 + L1PA8 LINE L1 5905 6172 0 523 225 123 59 chr5 84251937 84251970 -118833562 - L2 LINE L2 0 3313 3284 2588 110 6 6 chr5 84251970 84252334 -118833198 - THE1B LTR MaLR 0 364 1 10480 104 45 8 chr5 84252334 84252391 -118833141 - THE1B-int LTR MaLR 0 1580 1527 1963 166 0 0 chr5 84252391 84252687 -118832845 + AluSx SINE Alu 1 296 -16 10480 104 45 8 chr5 84252687 84254152 -118831380 - THE1B-int LTR MaLR -53 1527 1 2507 117 6 6 chr5 84254156 84254516 -118831016 - THE1B LTR MaLR -4 360 1 523 225 123 59 chr5 84254516 84254663 -118830869 - L2 LINE L2 -31 3282 3115 484 277 127 0 chr5 84254682 84254848 -118830684 - MIR SINE MIR -26 236 50 391 335 81 3 chr5 84254906 84255219 -118830313 - L2 LINE L2 -228 3085 2705 13878 73 4 12 chr5 84255781 84258734 -118826798 + HERV9 LTR ERV1 5387 8399 0 2296 179 16 37 chr5 84258741 84259305 -118826227 + pTR5 LTR ERV1 795 1346 -1092 4764 113 57 0 chr5 84259319 84259964 -118825568 + LTR12 LTR ERV1 5 686 -2 1930 261 86 16 chr5 84260128 84260673 -118824859 - MLT1G1 LTR MaLR -9 586 4 687 253 112 0 chr5 84260886 84261064 -118824468 + MIR SINE MIR 41 238 -24 724 228 20 33 chr5 84261933 84262141 -118823391 - MER63 DNA MER1_type 0 1688 1 478 290 84 95 chr5 84262389 84262613 -118822919 + HAL1 LINE L1 844 1069 -1438 2253 102 14 0 chr5 84262613 84262906 -118822626 + AluSx SINE Alu 1 297 -15 478 290 84 95 chr5 84262906 84263055 -118822477 + HAL1 LINE L1 1069 1218 -1289 2261 95 3 7 chr5 84263055 84263360 -118822172 + AluY SINE Alu 1 304 -7 478 290 84 95 chr5 84263360 84263523 -118822009 + HAL1 LINE L1 1218 1375 -1132 2330 77 0 7 chr5 84264333 84264632 -118820900 + AluY SINE Alu 1 297 -14 1141 76 45 0 chr5 84264837 84264994 -118820538 - AluY SINE Alu -15 296 133 2497 49 0 20 chr5 84264994 84265298 -118820234 - AluY SINE Alu -13 298 1 1636 188 0 14 chr5 84265309 84265602 -118819930 - AluJo SINE Alu -23 289 1 2044 144 0 0 chr5 84265631 84265929 -118819603 + AluSx SINE Alu 1 298 -14 204 226 0 0 chr5 84266180 84266233 -118819299 + T-rich Low_complexity Low_complexity 1 53 0 2172 80 10 3 chr5 84266297 84266585 -118818947 + AluSc SINE Alu 1 290 -19 201 227 27 27 chr5 84266689 84266764 -118818768 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 235 157 0 59 chr5 84266764 84266815 -118818717 - L1MC4 LINE L1 -1337 6705 6658 228 125 0 50 chr5 84266900 84266940 -118818592 + MER63 DNA MER1_type 1 38 -172 735 275 54 21 chr5 84266942 84267182 -118818350 + L2 LINE L2 2657 2904 -410 26 39 0 20 chr5 84267313 84267351 -118818181 + AT_rich Low_complexity Low_complexity 1 39 -11 2170 111 3 0 chr5 84267351 84267639 -118817893 - AluSq SINE Alu -24 289 1 26 39 0 20 chr5 84267639 84267651 -118817881 + AT_rich Low_complexity Low_complexity 39 50 0 2015 119 0 17 chr5 84267651 84267944 -118817588 - AluJb SINE Alu -24 288 1 949 228 10 5 chr5 84267947 84268155 -118817377 - MIR SINE MIR -54 208 2 1281 156 26 0 chr5 84268174 84268405 -118817127 - L1MA8 LINE L1 -4 6287 6051 492 214 71 125 chr5 84268435 84268659 -118816873 + L2 LINE L2 3102 3313 0 2324 97 0 7 chr5 84269198 84269497 -118816035 - AluSx SINE Alu -15 297 1 2200 89 31 3 chr5 84269839 84270132 -118815400 - AluSx SINE Alu -11 301 1 2201 92 0 3 chr5 84270302 84270613 -118814919 + AluSg SINE Alu 1 310 0 535 268 35 0 chr5 84270749 84270891 -118814641 + MIR SINE MIR 66 212 -50 2473 279 116 40 chr5 84270992 84271724 -118813808 + L2 LINE L2 1547 2222 -1091 2154 121 3 10 chr5 84271724 84272030 -118813502 + AluSx SINE Alu 1 304 -8 2473 279 116 40 chr5 84272030 84272355 -118813177 + L2 LINE L2 2222 2521 -792 2305 98 0 0 chr5 84272355 84272651 -118812881 - AluSx SINE Alu -16 296 1 2473 279 116 40 chr5 84272651 84273231 -118812301 + L2 LINE L2 2521 3313 0 228 185 19 37 chr5 84273576 84273630 -118811902 + GA-rich Low_complexity Low_complexity 4 56 0 280 242 0 0 chr5 84273690 84273752 -118811780 - L2 LINE L2 0 3313 3252 1805 168 7 3 chr5 84273832 84274124 -118811408 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr5 84274291 84274312 -118811220 + AT_rich Low_complexity Low_complexity 1 21 0 2310 115 0 0 chr5 84274376 84274680 -118810852 - AluSg SINE Alu -6 304 1 2237 112 0 3 chr5 84274796 84275101 -118810431 - AluSx SINE Alu -8 304 1 28 0 0 0 chr5 84276323 84276351 -118809181 + AT_rich Low_complexity Low_complexity 1 28 0 2406 103 0 0 chr5 84276366 84276668 -118808864 + AluSx SINE Alu 1 302 -10 2261 109 3 0 chr5 84276814 84277118 -118808414 + AluSq SINE Alu 1 305 -8 224 211 123 0 chr5 84277191 84277248 -118808284 - L2 LINE L2 0 3272 3209 2133 226 96 10 chr5 84277696 84278196 -118807336 - Zaphod DNA AcHobo -3482 549 7 21 71 0 0 chr5 84279680 84279722 -118805810 + GC_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr5 84279970 84280013 -118805519 + GC_rich Low_complexity Low_complexity 1 43 0 3939 169 70 42 chr5 84280834 84282350 -118803182 - L1MB7 LINE L1 0 6184 4625 259 196 0 0 chr5 84282548 84282604 -118802928 - L1M4 LINE L1 -455 5729 5674 1957 153 7 7 chr5 84282853 84283154 -118802378 + AluJo SINE Alu 1 301 -11 1561 228 0 0 chr5 84283396 84283708 -118801824 - AluJo SINE Alu 0 312 1 2266 80 17 3 chr5 84285206 84285505 -118800027 - AluSp SINE Alu -10 303 1 2302 100 0 0 chr5 84286227 84286518 -118799014 + AluSc SINE Alu 1 291 -18 240 230 30 40 chr5 84287035 84287135 -118798397 - L1ME4a LINE L1 -195 5926 5828 1855 150 0 27 chr5 84287165 84287465 -118798067 - AluJo SINE Alu -20 292 1 228 35 0 0 chr5 84287517 84287546 -118797986 + (T)n Simple_repeat Simple_repeat 1 29 0 26 0 0 0 chr5 84287728 84287754 -118797778 + AT_rich Low_complexity Low_complexity 1 26 0 2096 115 7 13 chr5 84287993 84288297 -118797235 - AluSx SINE Alu -7 305 4 998 196 214 0 chr5 84288399 84288619 -118796913 + Tigger7 DNA MER2_type 1 267 -466 624 135 0 0 chr5 84288652 84288741 -118796791 + Tigger7 DNA MER2_type 2403 2491 0 820 136 146 60 chr5 84288824 84289023 -118796509 - Tigger1 DNA MER2_type -1 2417 2202 720 180 23 0 chr5 84289029 84289157 -118796375 - Tigger1 DNA MER2_type -2281 137 7 814 128 0 8 chr5 84289715 84289832 -118795700 + FLAM_C SINE Alu 9 124 -19 657 184 26 0 chr5 84289935 84290049 -118795483 - FLAM_A SINE Alu -13 129 13 1859 168 10 0 chr5 84290616 84290920 -118794612 + AluSx SINE Alu 1 307 -5 2167 114 7 0 chr5 84291234 84291532 -118794000 - AluSx SINE Alu -12 300 1 2408 78 0 0 chr5 84291542 84291836 -118793696 - AluY SINE Alu -17 294 1 222 200 0 0 chr5 84291880 84291920 -118793612 + (TATG)n Simple_repeat Simple_repeat 3 42 0 289 300 92 33 chr5 84292871 84292991 -118792541 - L2 LINE L2 0 3272 3146 515 254 22 99 chr5 84293125 84293306 -118792226 + L2 LINE L2 7 173 -3141 535 258 43 64 chr5 84293354 84293587 -118791945 + L2 LINE L2 3086 3313 0 468 370 10 15 chr5 84293596 84293796 -118791736 + L2 LINE L2 2573 2771 -543 181 222 56 0 chr5 84293838 84293874 -118791658 - L2 LINE L2 -38 3275 3238 469 270 79 11 chr5 84294090 84294279 -118791253 - HsTC2 DNA Tc2 -173 1725 1524 30217 29 0 0 chr5 84294312 84298641 -118786891 - L1PA3 LINE L1 0 6155 1826 244 380 0 0 chr5 84298641 84298720 -118786812 + L2 LINE L2 2992 3070 -202 22 70 0 0 chr5 84298766 84298809 -118786723 + AT_rich Low_complexity Low_complexity 1 43 0 199 153 153 34 chr5 84298834 84298893 -118786639 + L2 LINE L2 3242 3307 -6 189 0 0 0 chr5 84298935 84298956 -118786576 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 904 169 0 7 chr5 84298956 84299104 -118786428 - AluSg/x SINE Alu -29 280 134 1991 148 0 16 chr5 84299106 84299417 -118786115 - AluSx SINE Alu -6 306 1 2656 144 25 14 chr5 84299419 84299855 -118785677 - L1MC1 LINE L1 -506 5827 5387 1030 213 142 0 chr5 84299863 84300116 -118785416 - AluJo SINE Alu -18 294 6 585 125 22 59 chr5 84300123 84300259 -118785273 - L1MC1 LINE L1 -940 5393 5263 * 15813 80 11 14 chr5 84300232 84302995 -118782537 - L1PA7 LINE L1 0 6154 3407 2928 3 0 0 chr5 84302995 84303306 -118782226 - AluY SINE Alu 0 311 1 15813 80 11 14 chr5 84303306 84303578 -118781954 - L1PA7 LINE L1 -2747 3407 3136 321 116 0 0 chr5 84305657 84305700 -118779832 - THE1B LTR MaLR 0 355 313 2186 103 0 3 chr5 84305700 84305982 -118779550 + AluSq SINE Alu 1 281 -32 1935 131 36 39 chr5 84305998 84306335 -118779197 - THE1B LTR MaLR -28 336 1 1770 163 0 19 chr5 84306799 84307106 -118778426 + AluSx SINE Alu 1 301 -11 2284 102 13 3 chr5 84307467 84307771 -118777761 - AluSg SINE Alu -1 309 3 240 263 21 63 chr5 84307912 84308007 -118777525 + MIR SINE MIR 164 254 -8 1652 185 3 32 chr5 84308944 84309252 -118776280 + AluJb SINE Alu 1 299 -13 25 31 0 0 chr5 84310302 84310334 -118775198 + AT_rich Low_complexity Low_complexity 1 32 0 213 39 0 0 chr5 84311982 84312008 -118773524 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 84312500 84312551 -118772981 + AT_rich Low_complexity Low_complexity 1 51 0 2156 137 3 0 chr5 84316134 84316441 -118769091 - AluSx SINE Alu -4 308 1 1522 122 33 76 chr5 84317145 84317449 -118768083 - AluSx SINE Alu -20 292 2 349 300 182 41 chr5 84317812 84318032 -118767500 - L1ME LINE L1 -344 5777 5527 1034 274 265 27 chr5 84318151 84319070 -118766462 - L2 LINE L2 -85 3228 2078 801 168 15 0 chr5 84319647 84319778 -118765754 + FLAM_C SINE Alu 1 133 0 1427 181 12 12 chr5 84319794 84320048 -118765484 + AluJo SINE Alu 34 287 -25 303 336 96 0 chr5 84320272 84320397 -118765135 + L1MC/D LINE L1 5474 5610 -2198 306 274 82 82 chr5 84320490 84320793 -118764739 + L1ME LINE L1 5448 5750 -412 192 40 0 0 chr5 84321102 84321127 -118764405 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2272 103 0 10 chr5 84321175 84321487 -118764045 - AluSq SINE Alu 0 313 5 236 146 0 0 chr5 84321638 84321679 -118763853 - MADE1 DNA Mariner 0 80 40 360 248 170 33 chr5 84322316 84322469 -118763063 - MER5A DNA MER1_type -7 182 9 556 246 0 16 chr5 84322530 84322652 -118762880 + L2 LINE L2 3192 3311 -2 426 211 274 46 chr5 84322659 84322834 -118762698 - MIR SINE MIR -47 215 1 1239 116 40 5 chr5 84323677 84323876 -118761656 - THE1C LTR MaLR -169 206 1 400 229 29 31 chr5 84323896 84324063 -118761469 - L1M2 LINE L1 -4319 1897 1545 2357 70 0 7 chr5 84324063 84324414 -118761118 - AluSp SINE Alu 0 351 3 640 300 106 49 chr5 84324535 84324694 -118760838 - L1MEd LINE L1 -4862 1257 1108 362 20 40 0 chr5 84324694 84324744 -118760788 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 2040 105 0 7 chr5 84324744 84325020 -118760512 - AluSx SINE Alu -38 274 1 640 300 106 49 chr5 84325020 84325264 -118760268 - L1MEd LINE L1 -5011 1108 879 1771 165 46 0 chr5 84325264 84325549 -118759983 - AluJo SINE Alu -14 298 1 640 300 106 49 chr5 84325549 84325973 -118759559 - L1MEd LINE L1 -5240 879 381 2262 98 9 25 chr5 84326160 84326476 -118759056 + AluSx SINE Alu 1 311 -1 36869 97 29 21 chr5 84326483 84333139 -118752393 + HERV9 LTR ERV1 17 5206 -32 11983 94 4 16 chr5 84333277 84334137 -118751395 - L1P LINE L1 -1905 4241 3372 2889 3 0 0 chr5 84334137 84334448 -118751084 - AluY SINE Alu 0 311 1 11983 94 4 16 chr5 84334448 84335492 -118750040 - L1P LINE L1 -2774 3372 2360 28 0 0 0 chr5 84336910 84336938 -118748594 + AT_rich Low_complexity Low_complexity 1 28 0 300 151 151 92 chr5 84338282 84338401 -118747131 - L1MC4 LINE L1 -105 7937 7812 962 194 44 6 chr5 84338458 84338638 -118746894 - MER5A DNA MER1_type 0 189 3 400 259 163 48 chr5 84338686 84338833 -118746699 - MER5A DNA MER1_type 0 189 26 316 241 103 0 chr5 84338828 84338915 -118746617 + MER5B DNA MER1_type 5 100 -78 * 2265 123 0 0 chr5 84338916 84339226 -118746306 + AluSx SINE Alu 1 310 -2 2336 173 19 7 chr5 84339304 84339725 -118745807 + MSTB LTR MaLR 1 426 0 281 216 54 40 chr5 84339997 84340071 -118745461 + L2 LINE L2 2397 2471 -843 347 260 110 0 chr5 84340071 84340088 -118745444 - L1MA10 LINE L1 -2 6332 6316 3087 194 63 48 chr5 84340088 84340312 -118745220 - L1ME1 LINE L1 -10 6156 5937 2271 99 10 3 chr5 84340312 84340614 -118744918 + AluSg SINE Alu 1 304 -6 3087 194 63 48 chr5 84340614 84341046 -118744486 - L1ME1 LINE L1 -229 5937 5483 1700 172 14 10 chr5 84341046 84341342 -118744190 - AluJb SINE Alu -15 297 1 3087 194 63 48 chr5 84341342 84341515 -118744017 - L1ME1 LINE L1 -683 5483 5314 635 187 7 7 chr5 84341554 84341709 -118743823 - L1MD3 LINE L1 -939 7056 6902 603 180 34 48 chr5 84341707 84341913 -118743619 + L1M4 LINE L1 5024 5226 -920 * 243 79 0 0 chr5 84342220 84342258 -118743274 + (A)n Simple_repeat Simple_repeat 1 38 0 2111 141 0 3 chr5 84342266 84342572 -118742960 + AluSx SINE Alu 1 305 -7 2203 105 0 30 chr5 84342775 84343079 -118742453 - AluSq SINE Alu -18 295 1 269 267 35 35 chr5 84343098 84343184 -118742348 + L2 LINE L2 2606 2691 -623 408 133 0 0 chr5 84343184 84343244 -118742288 - AluS SINE Alu -258 60 1 1271 129 0 10 chr5 84343565 84343579 -118741953 + AluSq SINE Alu 121 134 -179 2389 99 0 0 chr5 84343579 84343882 -118741650 + AluSq SINE Alu 1 303 -10 1271 129 0 10 chr5 84343882 84344060 -118741472 + AluSq SINE Alu 134 311 -2 492 171 0 16 chr5 84344413 84344508 -118741024 - MIR SINE MIR -58 204 113 2022 115 11 0 chr5 84344521 84344808 -118740724 + AluSg SINE Alu 1 290 -20 1906 159 7 3 chr5 84345287 84345577 -118739955 + AluJo SINE Alu 1 291 -21 183 323 32 0 chr5 84347739 84347801 -118737731 - MIR3 SINE MIR -19 189 126 879 171 73 15 chr5 84348508 84348782 -118736750 - L1M4 LINE L1 -1550 4596 4307 * 2092 178 42 36 chr5 84348774 84349279 -118736253 - L1MB7 LINE L1 -16 6168 5661 341 210 0 25 chr5 84349280 84349361 -118736171 - L1M4 LINE L1 -1817 4329 4251 730 219 27 37 chr5 84349361 84349507 -118736025 + MER58A DNA MER1_type 40 185 -2235 2164 117 10 3 chr5 84349507 84349805 -118735727 - AluSx SINE Alu -12 300 1 730 219 27 37 chr5 84349805 84349845 -118735687 + MER58A DNA MER1_type 185 224 0 914 177 43 0 chr5 84350798 84350962 -118734570 + AluJo SINE Alu 1 171 -141 1500 196 65 16 chr5 84351432 84351860 -118733672 - Charlie4a DNA MER1_type 0 508 60 319 320 113 0 chr5 84351896 84352046 -118733486 + MIR SINE MIR 16 182 -80 206 337 112 11 chr5 84354163 84354252 -118731280 + L2 LINE L2 3201 3298 -15 2219 93 0 0 chr5 84355179 84355509 -118730023 + AluSg SINE Alu 1 330 0 490 268 87 0 chr5 84355936 84356119 -118729413 - MER58 DNA MER1_type -87 254 56 656 182 42 14 chr5 84356844 84356987 -118728545 - MSTD LTR MaLR 0 396 250 964 172 116 33 chr5 84357086 84357254 -118728278 - AluJo SINE Alu -7 305 114 207 0 0 0 chr5 84357254 84357277 -118728255 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 964 172 116 33 chr5 84357277 84357323 -118728209 - AluJo SINE Alu -198 114 73 685 212 7 0 chr5 84357325 84357462 -118728070 - MSTD LTR MaLR -256 140 3 1692 186 83 6 chr5 84357624 84357962 -118727570 - MLT1A1 LTR MaLR 0 365 2 676 228 0 29 chr5 84358058 84358194 -118727338 + FLAM_A SINE Alu 2 133 0 498 236 167 82 chr5 84359282 84359372 -118726160 - L1M4 LINE L1 -752 5394 5313 2423 64 10 3 chr5 84359372 84359669 -118725863 - AluY SINE Alu -12 299 1 498 236 167 82 chr5 84359669 84360032 -118725500 - L1M4 LINE L1 -833 5313 4902 452 311 115 25 chr5 84360807 84361128 -118724404 - L2 LINE L2 -367 2947 2598 613 167 78 14 chr5 84361272 84361416 -118724116 - MER45A DNA AcHobo 0 178 16 360 118 0 0 chr5 84361576 84361627 -118723905 - MER66B LTR ERV1 -141 345 295 2256 104 0 16 chr5 84361894 84362202 -118723330 - AluSq SINE Alu -10 303 1 2348 93 3 3 chr5 84362309 84362610 -118722922 + AluSp SINE Alu 1 301 -12 2635 128 3 11 chr5 84363822 84364189 -118721343 - THE1B LTR MaLR 0 364 1 209 327 208 0 chr5 84366544 84366645 -118718887 - MER91A DNA MER1_type -74 122 1 3813 175 35 21 chr5 84366841 84367602 -118717930 - L1MB4 LINE L1 0 6180 5409 1186 248 88 0 chr5 84367830 84368092 -118717440 - AluJo SINE Alu -17 285 1 338 291 40 26 chr5 84368095 84368246 -118717286 + Charlie8 DNA MER1_type 81 233 -2184 212 0 0 35 chr5 84369645 84369674 -118715858 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 189 164 0 45 chr5 84370747 84370814 -118714718 + (TA)n Simple_repeat Simple_repeat 1 64 0 304 200 21 84 chr5 84370815 84370910 -118714622 - L1MC4 LINE L1 -1340 6702 6614 300 274 140 24 chr5 84371623 84371787 -118713745 - L1ME4a LINE L1 -214 5907 5725 2020 122 14 0 chr5 84372000 84372288 -118713244 + AluSx SINE Alu 2 293 -19 403 289 47 55 chr5 84373885 84374120 -118711412 - MIR SINE MIR -5 257 25 608 289 93 9 chr5 84374375 84374600 -118710932 + MIR SINE MIR 8 251 -11 590 242 187 5 chr5 84374983 84375162 -118710370 - MIR SINE MIR -22 240 20 243 0 0 0 chr5 84375162 84375189 -118710343 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 242 187 5 chr5 84375189 84375207 -118710325 - MIR SINE MIR -242 20 7 373 279 61 34 chr5 84375216 84375363 -118710169 - L2 LINE L2 -80 3233 3083 2137 131 59 59 chr5 84375379 84375769 -118709763 - MLT1B LTR MaLR 0 390 1 2234 171 32 15 chr5 84375770 84376179 -118709353 - MLT1B-int LTR MaLR -1 1370 955 10001 52 5 113 chr5 84376189 84377742 -118707790 - SVA Other Other 0 1386 1 2302 198 17 37 chr5 84378039 84378580 -118706952 - MLT1B-int LTR MaLR -500 871 253 4685 174 62 13 chr5 84379846 84381166 -118704366 + L1MB8 LINE L1 4781 6175 -3 204 297 22 44 chr5 84381238 84381329 -118704203 - MIR SINE MIR -138 124 36 290 250 0 0 chr5 84381578 84381638 -118703894 - MLT1J1 LTR MaLR -122 324 265 * 389 213 110 65 chr5 84381621 84381776 -118703756 - MLT1J2 LTR MaLR -198 252 91 4015 115 70 2 chr5 84381811 84382383 -118703149 - LTR9 LTR ERV1 0 612 2 253 328 30 30 chr5 84383162 84383296 -118702236 + MIR SINE MIR 129 262 0 187 404 37 0 chr5 84383461 84383570 -118701962 - L2 LINE L2 -6 3266 3154 2168 119 6 6 chr5 84383637 84383949 -118701583 - AluSx SINE Alu 0 312 1 475 209 68 68 chr5 84384544 84384721 -118700811 - MIR3 SINE MIR -14 194 18 2617 43 0 3 chr5 84384740 84385045 -118700487 - AluY SINE Alu -7 304 1 3073 129 75 73 chr5 84385501 84386007 -118699525 + MER6A DNA MER2_type 1 510 -355 1574 182 3 17 chr5 84386007 84386298 -118699234 - AluJo SINE Alu -23 289 3 3073 129 75 73 chr5 84386298 84386395 -118699137 + MER6A DNA MER2_type 510 605 0 1589 148 18 22 chr5 84386642 84386919 -118698613 - Tigger7 DNA MER2_type -3 2484 2209 1034 184 11 6 chr5 84386919 84387093 -118698439 - Tigger7 DNA MER2_type -530 175 1 937 177 0 0 chr5 84388926 84389073 -118696459 + FRAM SINE Alu 1 146 -30 920 172 77 19 chr5 84389177 84389386 -118696146 + L1MC5 LINE L1 7689 7909 -52 224 333 50 10 chr5 84391456 84391555 -118693977 + L2 LINE L2 3170 3272 0 353 251 77 77 chr5 84391653 84391836 -118693696 + MER5A DNA MER1_type 7 189 0 384 315 168 23 chr5 84391933 84392550 -118692982 - L2 LINE L2 0 3313 2604 517 284 170 46 chr5 84392954 84393062 -118692470 + MIR SINE MIR 10 103 -159 1389 178 31 0 chr5 84393062 84393287 -118692245 + MER46A DNA MER2_type 1 232 -4 517 284 170 46 chr5 84393287 84393396 -118692136 + MIR SINE MIR 103 254 -8 318 301 27 82 chr5 84393446 84393629 -118691903 + MIR3 SINE MIR 30 202 -6 896 257 76 16 chr5 84394519 84394822 -118690710 - MER90 LTR ERV1 -147 428 108 227 349 12 0 chr5 84395069 84395155 -118690377 + MIR SINE MIR 54 140 -122 522 202 9 18 chr5 84395165 84395274 -118690258 - L1MC/D LINE L1 -558 5801 5694 196 250 139 0 chr5 84395283 84395355 -118690177 + MIR SINE MIR 137 218 -44 231 202 119 55 chr5 84395896 84396005 -118689527 + L1ME4a LINE L1 6006 6121 0 949 107 0 15 chr5 84396832 84396963 -118688569 + FLAM_C SINE Alu 11 139 -4 29 56 0 28 chr5 84396994 84397036 -118688496 + AT_rich Low_complexity Low_complexity 1 42 -28 1334 176 35 48 chr5 84397036 84397325 -118688207 - AluSx SINE Alu -26 286 2 29 56 0 28 chr5 84397325 84397354 -118688178 + AT_rich Low_complexity Low_complexity 42 70 0 1308 202 161 71 chr5 84397536 84398045 -118687487 - L1MD2 LINE L1 -2 6357 5803 1501 120 200 0 chr5 84398055 84398305 -118687227 - AluSx SINE Alu -12 300 1 1385 115 0 0 chr5 84398396 84398579 -118686953 - AluSx SINE Alu -129 183 1 309 317 61 0 chr5 84399210 84399292 -118686240 - L2 LINE L2 0 3272 3186 1803 109 0 44 chr5 84399455 84399729 -118685803 - AluSx SINE Alu -14 298 37 1721 130 134 4 chr5 84400149 84400410 -118685122 - AluSx SINE Alu -7 295 1 595 104 10 31 chr5 84400462 84400558 -118684974 + L1PA14 LINE L1 6066 6159 -2 687 293 122 30 chr5 84400575 84401050 -118684482 + L1ME4a LINE L1 5586 6104 -17 209 200 25 0 chr5 84401066 84401106 -118684426 + (TG)n Simple_repeat Simple_repeat 2 42 0 2303 96 0 3 chr5 84404160 84404452 -118681080 - AluSc SINE Alu -18 291 1 400 221 36 43 chr5 84404481 84404621 -118680911 - L1ME4a LINE L1 -1 6120 5982 22 0 0 0 chr5 84405278 84405300 -118680232 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 84405495 84405519 -118680013 + AT_rich Low_complexity Low_complexity 1 24 0 2224 116 0 7 chr5 84405834 84406137 -118679395 + AluSx SINE Alu 1 301 -11 1002 99 35 0 chr5 84406137 84406306 -118679226 + AluSc SINE Alu 140 313 0 398 309 30 15 chr5 84406485 84406686 -118678846 - L1MC4 LINE L1 -1023 7019 6816 651 253 86 6 chr5 84407822 84407996 -118677536 - MIR SINE MIR -17 245 58 592 314 16 11 chr5 84408156 84408347 -118677185 - MIR3 SINE MIR -7 201 10 209 32 0 32 chr5 84408616 84408647 -118676885 + (CTA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr5 84409326 84409347 -118676185 + AT_rich Low_complexity Low_complexity 1 21 0 2247 101 3 7 chr5 84409706 84410003 -118675529 - AluSx SINE Alu -16 296 1 198 47 0 163 chr5 84410763 84410806 -118674726 - L2 LINE L2 0 3313 3278 2278 115 3 3 chr5 84411332 84411645 -118673887 - AluSp SINE Alu 0 313 1 304 227 41 21 chr5 84412305 84412402 -118673130 + L1M2 LINE L1 5338 5436 -855 486 321 45 52 chr5 84413071 84413339 -118672193 + L1ME LINE L1 5543 5808 -313 2058 114 30 14 chr5 84413519 84413816 -118671716 + AluSg SINE Alu 1 302 -8 290 240 93 0 chr5 84414589 84414664 -118670868 + MIR3 SINE MIR 97 178 -30 2538 47 7 3 chr5 84414880 84415181 -118670351 + AluY SINE Alu 1 302 -9 1774 144 3 38 chr5 84416655 84416947 -118668585 + AluJb SINE Alu 3 284 -28 301 250 0 0 chr5 84418364 84418444 -118667088 + MER116 DNA Mariner 1 80 0 238 298 46 53 chr5 84418444 84418575 -118666957 + L2 LINE L2 3139 3268 -4 2121 132 0 13 chr5 84420533 84420836 -118664696 + AluSg SINE Alu 1 299 -11 735 211 0 0 chr5 84421104 84421237 -118664295 - FLAM_C SINE Alu 0 133 1 1695 164 11 7 chr5 84421326 84421613 -118663919 + AluJo SINE Alu 1 288 -24 294 29 0 0 chr5 84421613 84421648 -118663884 + (GA)n Simple_repeat Simple_repeat 2 36 0 1754 133 224 11 chr5 84422358 84422711 -118662821 - MSTA LTR MaLR 0 428 1 27 73 0 0 chr5 84424124 84424179 -118661353 + AT_rich Low_complexity Low_complexity 1 55 0 375 268 139 43 chr5 84424244 84424797 -118660735 + L1ME4a LINE L1 5312 5917 -204 737 183 33 0 chr5 84424945 84425065 -118660467 + FLAM_C SINE Alu 1 124 -19 24 32 0 0 chr5 84425419 84425450 -118660082 + AT_rich Low_complexity Low_complexity 1 31 0 1139 145 0 0 chr5 84425847 84426019 -118659513 + AluSp SINE Alu 137 308 -5 22 35 0 0 chr5 84426111 84426140 -118659392 + AT_rich Low_complexity Low_complexity 1 29 0 310 294 0 24 chr5 84427125 84427210 -118658322 - MIR3 SINE MIR -9 199 117 201 261 22 0 chr5 84428128 84428174 -118657358 - L2 LINE L2 -81 3191 3145 24 53 0 0 chr5 84428412 84428450 -118657082 + AT_rich Low_complexity Low_complexity 1 38 0 374 351 87 27 chr5 84428641 84428826 -118656706 + MER91A DNA MER1_type 1 196 0 189 306 149 33 chr5 84429480 84429601 -118655931 + L2 LINE L2 3175 3309 -4 3973 54 36 11 chr5 84429825 84430359 -118655173 - L1PA7 LINE L1 -1 6153 5607 848 138 8 0 chr5 84431209 84431339 -118654193 - FLAM_C SINE Alu -2 131 1 270 245 0 49 chr5 84432255 84432357 -118653175 - Charlie7 DNA MER1_type -51 2561 2465 326 159 14 0 chr5 84435656 84435725 -118649807 + (TG)n Simple_repeat Simple_repeat 2 71 0 294 29 0 0 chr5 84435887 84435922 -118649610 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 351 0 0 0 chr5 84435921 84435960 -118649572 + (TA)n Simple_repeat Simple_repeat 2 40 0 1066 97 0 39 chr5 84435960 84436114 -118649418 - AluSg/x SINE Alu -1 311 164 991 121 22 28 chr5 84436115 84436297 -118649235 + L1ME LINE L1 5335 5515 -663 869 117 15 0 chr5 84436297 84436434 -118649098 + AluSg/x SINE Alu 168 306 -6 853 224 33 54 chr5 84436442 84436773 -118648759 - L1M4 LINE L1 -1538 4608 4285 208 208 83 28 chr5 84437863 84437935 -118647597 - MIR SINE MIR -9 253 178 1873 138 6 58 chr5 84438047 84438374 -118647158 + AluSx SINE Alu 1 310 -2 241 241 0 0 chr5 84438469 84438527 -118647005 + L1ME LINE L1 5691 5748 -373 264 260 164 45 chr5 84438914 84439091 -118646441 - MIR SINE MIR -41 221 24 613 259 53 18 chr5 84439195 84439365 -118646167 + MIR SINE MIR 31 206 -56 2086 109 7 0 chr5 84439546 84439839 -118645693 - AluSx SINE Alu -17 295 1 180 291 0 36 chr5 84440159 84440214 -118645318 + MIR SINE MIR 23 75 -133 913 158 0 0 chr5 84440462 84440595 -118644937 - FLAM_A SINE Alu 0 133 1 22 56 0 0 chr5 84441973 84442009 -118643523 + AT_rich Low_complexity Low_complexity 1 36 0 1821 154 10 29 chr5 84442415 84442721 -118642811 + AluJo SINE Alu 1 300 -12 1698 110 103 22 chr5 84443015 84443287 -118642245 + AluSx SINE Alu 6 299 -13 486 317 106 53 chr5 84445118 84445241 -118640291 - L2 LINE L2 -467 2847 2732 1941 188 121 32 chr5 84445241 84445358 -118640174 + MLT1D LTR MaLR 1 106 -399 2541 42 7 7 chr5 84445358 84445664 -118639868 - AluY SINE Alu -5 306 1 1941 188 121 32 chr5 84445664 84446010 -118639522 + MLT1D LTR MaLR 106 505 0 486 317 106 53 chr5 84446010 84446647 -118638885 - L2 LINE L2 -582 2732 2046 1520 52 26 0 chr5 84447748 84447940 -118637592 + MER107 DNA MER1_type 1 197 0 21 0 0 0 chr5 84448471 84448492 -118637040 + AT_rich Low_complexity Low_complexity 1 21 0 658 108 0 0 chr5 84449964 84450066 -118635466 - L1MB2 LINE L1 -2 6169 6068 1968 113 74 0 chr5 84450639 84450923 -118634609 + AluSx SINE Alu 1 305 -7 2150 130 10 0 chr5 84452113 84452421 -118633111 - AluSx SINE Alu -1 311 1 191 310 42 28 chr5 84452424 84452495 -118633037 + L2 LINE L2 3123 3194 -78 339 240 250 0 chr5 84452511 84452607 -118632925 - MER119 DNA MER1_type -463 120 1 459 326 44 36 chr5 84452615 84453101 -118632431 - L2 LINE L2 -225 3088 2537 233 62 0 0 chr5 84453698 84453730 -118631802 - MLT2C2 LTR ERVL -9 455 424 3065 184 28 2 chr5 84453730 84454311 -118631221 + ERVL LTR ERVL 1623 2218 -3546 758 159 86 69 chr5 84455377 84455609 -118629923 - MER106A DNA MER1_type 0 236 1 183 323 32 0 chr5 84458355 84458417 -118627115 - MIR3 SINE MIR -19 189 126 1195 163 74 0 chr5 84459121 84459391 -118626141 - L1M4 LINE L1 -1550 4596 4307 * 1299 186 43 28 chr5 84459381 84459878 -118625654 - L1MB4 LINE L1 -1 6179 5667 297 263 0 25 chr5 84459886 84459966 -118625566 - L1M4 LINE L1 -1818 4328 4251 641 231 23 40 chr5 84459981 84460112 -118625420 + MER58B DNA MER1_type 172 301 -2119 1720 159 10 13 chr5 84460112 84460413 -118625119 - AluSx SINE Alu -12 300 1 641 231 23 40 chr5 84460413 84460454 -118625078 + MER58B DNA MER1_type 301 341 0 1489 168 60 14 chr5 84461416 84461701 -118623831 + AluJb SINE Alu 1 298 -14 195 204 0 0 chr5 84461705 84461749 -118623783 + G-rich Low_complexity Low_complexity 3 46 0 403 289 47 55 chr5 84462558 84462793 -118622739 - MIR SINE MIR -5 257 25 608 289 93 9 chr5 84463048 84463273 -118622259 + MIR SINE MIR 8 251 -11 590 242 187 5 chr5 84463656 84463835 -118621697 - MIR SINE MIR -22 240 20 243 0 0 0 chr5 84463835 84463862 -118621670 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 242 187 5 chr5 84463862 84463880 -118621652 - MIR SINE MIR -242 20 7 373 279 61 34 chr5 84463889 84464036 -118621496 - L2 LINE L2 -80 3233 3083 2137 131 59 59 chr5 84464052 84464442 -118621090 - MLT1B LTR MaLR 0 390 1 2234 171 32 15 chr5 84464443 84464852 -118620680 - MLT1B-int LTR MaLR -1 1370 955 10043 50 5 112 chr5 84464862 84466413 -118619119 - SVA Other Other 0 1386 1 2302 198 17 37 chr5 84466709 84467250 -118618282 - MLT1B-int LTR MaLR -500 871 253 4685 174 62 13 chr5 84468516 84469836 -118615696 + L1MB8 LINE L1 4781 6175 -3 204 297 22 44 chr5 84469908 84469999 -118615533 - MIR SINE MIR -138 124 36 290 250 0 0 chr5 84470248 84470308 -118615224 - MLT1J1 LTR MaLR -122 324 265 * 389 213 110 65 chr5 84470291 84470446 -118615086 - MLT1J2 LTR MaLR -198 252 91 4000 113 70 3 chr5 84470481 84471054 -118614478 - LTR9 LTR ERV1 0 612 2 253 328 30 30 chr5 84471833 84471967 -118613565 + MIR SINE MIR 129 262 0 187 404 37 0 chr5 84472132 84472241 -118613291 - L2 LINE L2 -6 3266 3154 2168 119 6 6 chr5 84472308 84472620 -118612912 - AluSx SINE Alu 0 312 1 475 209 68 68 chr5 84473215 84473392 -118612140 - MIR3 SINE MIR -14 194 18 2617 43 0 3 chr5 84473411 84473716 -118611816 - AluY SINE Alu -7 304 1 3090 131 73 73 chr5 84474172 84474679 -118610853 + MER6A DNA MER2_type 1 510 -355 1574 182 3 17 chr5 84474679 84474970 -118610562 - AluJo SINE Alu -23 289 3 3090 131 73 73 chr5 84474970 84475067 -118610465 + MER6A DNA MER2_type 509 605 0 1589 148 18 22 chr5 84475314 84475591 -118609941 - Tigger7 DNA MER2_type -3 2584 2309 1034 184 11 6 chr5 84475591 84475765 -118609767 - Tigger7 DNA MER2_type -2312 175 1 944 196 0 0 chr5 84477598 84477761 -118607771 + FRAM SINE Alu 1 162 -14 1385 116 0 0 chr5 84480147 84480328 -118605204 + AluSq SINE Alu 101 281 -32 254 211 8 117 chr5 84481069 84481197 -118604335 - MIR SINE MIR -53 209 96 1350 115 0 6 chr5 84483166 84483348 -118602184 + AluSq SINE Alu 101 281 -32 254 211 8 117 chr5 84484077 84484205 -118601327 - MIR SINE MIR -53 209 96 329 296 126 69 chr5 84488498 84488775 -118596757 + HAL1b LINE L1 105 397 -951 2273 131 0 0 chr5 84489280 84489592 -118595940 - AluSx SINE Alu 0 312 1 6701 50 6 1 chr5 84489846 84490663 -118594869 - L1PA7 LINE L1 -3 6151 5331 26 0 0 0 chr5 84491324 84491350 -118594182 + AT_rich Low_complexity Low_complexity 1 26 0 358 286 193 8 chr5 84491405 84491524 -118594008 + MER5A DNA MER1_type 47 187 -2 320 227 34 11 chr5 84491587 84491675 -118593857 + L1M4 LINE L1 3859 3948 -2198 373 299 184 13 chr5 84491686 84491990 -118593542 - L1 LINE L1 -1553 4593 4238 6271 197 106 75 chr5 84492107 84492361 -118593171 + L1MDa LINE L1 20 265 -6275 2474 119 11 8 chr5 84492361 84492715 -118592817 + THE1A LTR MaLR 1 355 0 6271 197 106 75 chr5 84492715 84492820 -118592712 + L1MDa LINE L1 265 365 -6175 297 0 0 0 chr5 84492820 84492853 -118592679 + (CA)n Simple_repeat Simple_repeat 1 33 0 6271 197 106 75 chr5 84492853 84494560 -118590972 + L1MDa LINE L1 365 2151 -4389 3130 170 17 26 chr5 84494566 84495141 -118590391 - THE1-int LTR MaLR -407 1173 604 434 131 0 0 chr5 84495143 84495204 -118590328 - MSTA LTR MaLR -367 61 1 1216 46 13 7 chr5 84495623 84495774 -118589758 - L1PA6 LINE L1 -4 6150 5999 364 293 67 24 chr5 84495842 84496050 -118589482 - L1ME LINE L1 -360 5761 5545 1921 159 10 3 chr5 84496320 84496622 -118588910 + AluJb SINE Alu 1 304 -8 423 202 35 18 chr5 84496623 84496737 -118588795 + L1MD1 LINE L1 6117 6232 -10 22 35 0 0 chr5 84496935 84496964 -118588568 + AT_rich Low_complexity Low_complexity 1 29 0 220 277 4 106 chr5 84497916 84498044 -118587488 + MIR SINE MIR 19 132 -129 841 155 0 34 chr5 84498473 84498621 -118586911 + FLAM_C SINE Alu 1 143 0 2082 101 0 11 chr5 84500435 84500721 -118584811 - AluSg SINE Alu -5 305 23 23 0 0 0 chr5 84500721 84500744 -118584788 + AT_rich Low_complexity Low_complexity 1 23 0 477 96 0 0 chr5 84501208 84501281 -118584251 - AluY SINE Alu -2 307 235 1589 83 0 0 chr5 84501283 84501476 -118584056 - AluY SINE Alu -118 193 1 1994 153 18 9 chr5 84503714 84504047 -118581485 - MER7A DNA MER2_type 0 346 13 1301 280 122 31 chr5 84504172 84504847 -118580685 - MER20B DNA MER1_type -36 747 12 246 254 15 0 chr5 84506570 84506637 -118578895 + MIR SINE MIR 75 142 -120 * 434 254 135 0 chr5 84506635 84506761 -118578771 - MIR SINE MIR -44 218 76 498 246 43 7 chr5 84508445 84508583 -118576949 - MER112 DNA MER1_type 0 260 118 1026 200 0 11 chr5 84508638 84508828 -118576704 - AluJo SINE Alu -124 188 1 4804 131 41 26 chr5 84508829 84509398 -118576134 - Tigger1 DNA MER2_type -1602 816 230 2238 106 0 0 chr5 84509398 84509691 -118575841 + AluSg SINE Alu 1 293 -17 4804 131 41 26 chr5 84509691 84509925 -118575607 - Tigger1 DNA MER2_type -2188 230 1 807 228 135 59 chr5 84510261 84510498 -118575034 - MIR SINE MIR -1 261 7 1719 183 0 17 chr5 84511743 84512043 -118573489 - AluJb SINE Alu -17 295 1 1840 154 13 13 chr5 84512868 84513173 -118572359 - AluJo SINE Alu -3 309 5 39 38 0 0 chr5 84513370 84513423 -118572109 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 84513522 84513543 -118571989 + AT_rich Low_complexity Low_complexity 1 21 0 1580 103 5 0 chr5 84514850 84515054 -118570478 - AluSq SINE Alu -45 268 64 2259 78 3 20 chr5 84515224 84515530 -118570002 + AluY SINE Alu 1 301 -10 211 235 15 44 chr5 84515618 84515686 -118569846 + GA-rich Low_complexity Low_complexity 4 69 0 2096 132 7 0 chr5 84515979 84516274 -118569258 + AluSx SINE Alu 3 299 -13 2187 91 7 14 chr5 84516409 84516705 -118568827 + AluSx SINE Alu 13 306 -6 391 340 63 29 chr5 84517420 84517626 -118567906 + L1ME4a LINE L1 5656 5868 -253 1993 33 41 0 chr5 84517817 84518060 -118567472 + L1PA3 LINE L1 5900 6152 -3 25 0 0 0 chr5 84518060 84518085 -118567447 + AT_rich Low_complexity Low_complexity 1 25 0 1293 219 8 0 chr5 84520120 84520357 -118565175 - MER8 DNA MER2_type 0 239 1 1225 179 0 5 chr5 84520876 84521072 -118564460 + AluJb SINE Alu 85 279 -33 414 0 0 0 chr5 84521072 84521118 -118564414 + (CA)n Simple_repeat Simple_repeat 1 46 0 1848 159 3 13 chr5 84522650 84522952 -118562580 + AluJo SINE Alu 11 309 -3 21 0 0 0 chr5 84523411 84523432 -118562100 + AT_rich Low_complexity Low_complexity 1 21 0 226 259 19 0 chr5 84523604 84523658 -118561874 + MER5A DNA MER1_type 128 182 -7 667 250 103 54 chr5 84524741 84525109 -118560423 + MER113 DNA MER1_type? 30 415 -106 2011 214 34 23 chr5 84525109 84525534 -118559998 + L1M4 LINE L1 4760 5179 -967 1290 204 108 14 chr5 84525534 84525813 -118559719 + AluSg SINE Alu 1 305 -5 1982 134 55 3 chr5 84525819 84526111 -118559421 + AluSx SINE Alu 3 309 -3 2011 214 34 23 chr5 84526111 84526242 -118559290 + L1M4 LINE L1 5183 5329 -817 2983 178 89 64 chr5 84526243 84527183 -118558349 + L1MB3 LINE L1 5167 6126 -57 27 29 0 0 chr5 84527442 84527476 -118558056 + AT_rich Low_complexity Low_complexity 1 34 0 186 71 0 0 chr5 84528258 84528286 -118557246 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 293 280 30 68 chr5 84529958 84530090 -118555442 - L2 LINE L2 0 3272 3146 876 170 76 31 chr5 84530766 84530990 -118554542 - L1MB5 LINE L1 0 6174 5941 2386 189 87 72 chr5 84530993 84531327 -118554205 - L1MB5 LINE L1 -718 5456 5128 267 54 0 0 chr5 84531327 84531364 -118554168 + (TTG)n Simple_repeat Simple_repeat 2 38 0 2386 189 87 72 chr5 84531364 84531512 -118554020 - L1MB5 LINE L1 -1046 5128 4984 2293 93 0 0 chr5 84531512 84531803 -118553729 - AluY SINE Alu -20 291 1 2386 189 87 72 chr5 84531803 84532147 -118553385 - L1MB5 LINE L1 -1190 4984 4615 3292 93 39 8 chr5 84532515 84533001 -118552531 + MER1A DNA MER1_type 28 528 -1 204 229 21 0 chr5 84533465 84533513 -118552019 - MIR SINE MIR -1 261 213 907 191 45 10 chr5 84533525 84533724 -118551808 + MER46A DNA MER2_type 31 236 0 608 219 55 60 chr5 84533771 84533972 -118551560 - MIR SINE MIR -59 203 4 234 0 0 0 chr5 84534225 84534251 -118551281 + (A)n Simple_repeat Simple_repeat 1 26 0 212 310 138 11 chr5 84534302 84534389 -118551143 + MIR SINE MIR 51 148 -60 301 292 88 109 chr5 84535140 84535414 -118550118 + L3 LINE CR1 1044 1311 -266 200 217 58 29 chr5 84535414 84535483 -118550049 + MIR3 SINE MIR 111 181 -27 1493 152 66 0 chr5 84535582 84535884 -118549648 - MER33 DNA MER1_type -2 322 1 452 283 128 53 chr5 84535898 84536124 -118549408 - MIR SINE MIR -19 243 1 2022 152 0 0 chr5 84537109 84537129 -118548403 - AluSx SINE Alu -9 303 284 183 114 0 0 chr5 84537129 84537164 -118548368 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 2022 152 0 0 chr5 84537164 84537446 -118548086 - AluSx SINE Alu -27 285 1 38 0 0 20 chr5 84539122 84539145 -118546387 + AT_rich Low_complexity Low_complexity 1 23 -25 772 167 0 8 chr5 84539145 84539265 -118546267 + FLAM_C SINE Alu 1 119 -14 38 0 0 20 chr5 84539265 84539290 -118546242 + AT_rich Low_complexity Low_complexity 23 48 0 712 213 148 19 chr5 84539429 84539645 -118545887 + MIR SINE MIR 13 256 -6 192 77 0 0 chr5 84539850 84539876 -118545656 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 250 282 13 39 chr5 84540684 84540762 -118544770 - L2 LINE L2 -1 3271 3196 2037 81 15 0 chr5 84540830 84541091 -118544441 - AluSg SINE Alu -7 303 39 1958 127 28 0 chr5 84542352 84542635 -118542897 + AluSx SINE Alu 1 291 -21 3089 156 54 19 chr5 84543848 84544495 -118541037 - L1MA7 LINE L1 0 6291 5622 618 68 0 0 chr5 84544589 84544677 -118540855 + (TC)n Simple_repeat Simple_repeat 1 88 0 246 95 0 0 chr5 84544718 84544760 -118540772 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 22 0 67 chr5 84544795 84544840 -118540692 + (TC)n Simple_repeat Simple_repeat 1 42 0 324 311 116 58 chr5 84545085 84545362 -118540170 + HAL1b LINE L1 105 397 -951 2246 128 0 0 chr5 84545849 84546153 -118539379 - AluSx SINE Alu -8 304 1 3400 53 7 0 chr5 84546407 84546837 -118538695 - L1PA7 LINE L1 -3 6151 5719 308 293 60 42 chr5 84546857 84547005 -118538527 + L1M4 LINE L1 4029 4182 -1964 2019 146 16 3 chr5 84547005 84547313 -118538219 + AluSq SINE Alu 1 312 -1 308 293 60 42 chr5 84547313 84547331 -118538201 + L1M4 LINE L1 4182 4198 -1948 2842 152 54 19 chr5 84547492 84548070 -118537462 - L1MA7 LINE L1 -70 6221 5624 658 153 0 24 chr5 84548166 84548336 -118537196 + CT-rich Low_complexity Low_complexity 1 166 0 676 156 0 23 chr5 84548362 84548535 -118536997 + CT-rich Low_complexity Low_complexity 2 170 0 340 213 19 28 chr5 84548535 84548643 -118536889 + (CATATA)n Simple_repeat Simple_repeat 2 108 0 302 316 75 15 chr5 84548745 84548878 -118536654 + MIR SINE MIR 25 165 -97 1478 129 24 0 chr5 84548878 84549088 -118536444 + AluSg/x SINE Alu 82 296 -14 242 279 0 0 chr5 84549212 84549273 -118536259 + MIR SINE MIR 189 249 -13 1859 82 98 0 chr5 84550424 84550679 -118534853 - AluSg SINE Alu -30 280 1 326 125 0 0 chr5 84551600 84551648 -118533884 - Alu SINE Alu -18 284 237 2046 141 0 0 chr5 84551740 84552024 -118533508 - AluJb SINE Alu -28 284 1 705 222 99 0 chr5 84553148 84553310 -118532222 - MER45A DNA AcHobo 0 178 1 376 269 51 53 chr5 84553844 84554050 -118531482 - MIR SINE MIR -56 206 5 268 174 43 14 chr5 84554794 84554863 -118530669 - Charlie7 DNA MER1_type -2507 105 35 2083 143 0 13 chr5 84554901 84555216 -118530316 - AluSx SINE Alu -1 311 1 618 196 6 70 chr5 84555377 84555535 -118529997 + MER5A DNA MER1_type 38 185 -4 708 147 9 0 chr5 84555545 84555654 -118529878 + FLAM_A SINE Alu 1 110 -32 281 234 149 56 chr5 84557016 84557123 -118528409 - MLT1J LTR MaLR -318 193 77 189 247 136 62 chr5 84558741 84558822 -118526710 + L2 LINE L2 3158 3244 -28 593 53 0 0 chr5 84559964 84560039 -118525493 + AluSp SINE Alu 1 75 -238 3240 106 58 4 chr5 84560041 84560524 -118525008 + MER9 LTR ERVK 3 511 0 1807 73 4 13 chr5 84560524 84560758 -118524774 + AluSp SINE Alu 70 301 -12 2587 43 0 3 chr5 84561027 84561329 -118524203 + AluY SINE Alu 1 301 -10 2264 124 0 6 chr5 84561707 84562021 -118523511 - AluSx SINE Alu 0 312 1 2331 108 0 3 chr5 84562261 84562575 -118522957 + AluSq SINE Alu 1 313 0 672 77 0 0 chr5 84562593 84562684 -118522848 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 336 268 159 13 chr5 84562795 84562952 -118522580 + MER104 DNA Tc2 1 180 0 1020 126 0 18 chr5 84563551 84563799 -118521733 + AluJb SINE Alu 2 296 -16 204 40 0 0 chr5 84564515 84564540 -118520992 + (CGGGG)n Simple_repeat Simple_repeat 4 28 0 22 70 0 0 chr5 84564651 84564694 -118520838 + GC_rich Low_complexity Low_complexity 1 43 0 209 234 65 65 chr5 84566668 84566775 -118518757 - MIR SINE MIR -56 206 100 627 231 0 71 chr5 84566783 84566952 -118518580 + MER97c DNA MER1_type? 15 171 -919 357 277 68 41 chr5 84567698 84567877 -118517655 - MIR SINE MIR 0 262 72 2106 137 3 0 chr5 84567877 84568169 -118517363 + AluSx SINE Alu 1 293 -19 357 277 68 41 chr5 84568169 84568225 -118517307 - MIR SINE MIR -190 72 19 180 0 0 0 chr5 84568651 84568671 -118516861 + (TCTA)n Simple_repeat Simple_repeat 4 23 0 1402 147 77 37 chr5 84568739 84569012 -118516520 + AluJo SINE Alu 3 286 -26 46 33 0 0 chr5 84569012 84569072 -118516460 + AT_rich Low_complexity Low_complexity 1 60 0 1380 166 50 25 chr5 84569072 84569350 -118516182 - L1MB5 LINE L1 -4 6170 5886 1785 170 3 0 chr5 84569388 84569676 -118515856 - AluJb SINE Alu -23 289 1 351 215 13 13 chr5 84570325 84570404 -118515128 + MER112 DNA MER1_type 74 152 -108 289 296 106 7 chr5 84570399 84570541 -118514991 + MER112 DNA MER1_type 99 254 -6 * 2306 101 7 0 chr5 84571240 84571537 -118513995 + AluSx SINE Alu 1 299 -13 795 251 78 17 chr5 84571904 84572135 -118513397 + MIR SINE MIR 3 247 -15 1039 202 58 93 chr5 84572314 84572628 -118512904 - L1MC5 LINE L1 -7 7954 7668 1749 164 0 14 chr5 84572628 84572940 -118512592 - AluJo SINE Alu 0 308 1 1039 202 58 93 chr5 84572940 84573224 -118512308 - L1MC5 LINE L1 -293 7668 7376 802 213 119 55 chr5 84573204 84573457 -118512075 - L1MC4 LINE L1 -985 7057 6789 * 2044 123 3 36 chr5 84574677 84574819 -118510713 + AluSx SINE Alu 1 129 -183 2346 73 0 20 chr5 84574819 84575121 -118510411 + AluY SINE Alu 1 296 -15 2044 123 3 36 chr5 84575121 84575279 -118510253 + AluSx SINE Alu 129 291 -21 26 0 0 0 chr5 84575348 84575374 -118510158 + AT_rich Low_complexity Low_complexity 1 26 0 181 319 139 0 chr5 84575949 84576021 -118509511 - L2 LINE L2 -28 3244 3163 514 209 91 57 chr5 84576246 84576456 -118509076 - L1ME LINE L1 -5189 881 665 906 218 0 0 chr5 84576456 84576621 -118508911 - AluJb SINE Alu -11 301 137 6156 136 14 17 chr5 84576628 84577255 -118508277 - L1MA8 LINE L1 0 6291 5664 2475 88 0 0 chr5 84577255 84577560 -118507972 - AluSx SINE Alu -7 305 1 6156 136 14 17 chr5 84577560 84578265 -118507267 - L1MA8 LINE L1 -627 5664 4960 1929 131 22 34 chr5 84578316 84578636 -118506896 + THE1B LTR MaLR 1 316 -48 1598 238 6 11 chr5 84578644 84579001 -118506531 - L1ME LINE L1 -5478 592 238 2161 171 34 101 chr5 84579031 84579593 -118505939 - MER21B LTR ERV1 -1 862 339 1200 110 0 0 chr5 84579905 84580068 -118505464 + AluSg/x SINE Alu 143 305 -5 2293 107 0 25 chr5 84580079 84580397 -118505135 - AluSg SINE Alu 0 310 1 27 0 0 0 chr5 84580853 84580880 -118504652 + AT_rich Low_complexity Low_complexity 1 27 0 201 235 0 39 chr5 84582338 84582389 -118503143 + (CATATA)n Simple_repeat Simple_repeat 6 54 0 201 222 86 37 chr5 84583175 84583256 -118502276 - L2 LINE L2 -27 3286 3202 2535 61 3 6 chr5 84583761 84584073 -118501459 + AluY SINE Alu 1 311 0 637 188 56 25 chr5 84584378 84584538 -118500994 - LTR33 LTR ERVL -31 490 326 277 235 273 15 chr5 84584548 84584680 -118500852 - LTR33 LTR ERVL -343 178 13 22 35 0 0 chr5 84584996 84585025 -118500507 + AT_rich Low_complexity Low_complexity 1 29 0 1725 166 7 14 chr5 84585208 84585503 -118500029 + AluJb SINE Alu 3 295 -17 1903 180 55 0 chr5 84585967 84586350 -118499182 + Charlie1b DNA MER1_type 36 439 -84 1951 145 0 10 chr5 84586356 84586660 -118498872 + AluSg SINE Alu 1 301 -9 492 241 111 55 chr5 84586662 84586861 -118498671 + MER63A DNA MER1_type 1 210 0 * 515 147 29 29 chr5 84586861 84586954 -118498578 + Charlie1b DNA MER1_type 431 523 0 1972 156 0 0 chr5 84587137 84587432 -118498100 + AluJb SINE Alu 3 297 -15 2250 90 23 7 chr5 84587829 84588130 -118497402 + AluSq SINE Alu 1 306 -7 2291 110 3 0 chr5 84588550 84588860 -118496672 + AluSx SINE Alu 1 311 -1 485 188 208 47 chr5 84588882 84589021 -118496511 + MER5B DNA MER1_type 6 172 -6 2432 101 23 103 chr5 84589021 84589191 -118496341 + LTR23 LTR ERV1 1 183 -254 1836 134 17 27 chr5 84589191 84589483 -118496049 + AluSx SINE Alu 6 294 -18 2432 101 23 103 chr5 84589483 84589787 -118495745 + LTR23 LTR ERV1 183 437 0 4664 92 6 11 chr5 84589816 84590459 -118495073 + L1PA15 LINE L1 5526 6165 0 1509 149 12 33 chr5 84590473 84590715 -118494817 + AluJo SINE Alu 1 237 -75 210 290 118 0 chr5 84590751 84590844 -118494688 - MER5A DNA MER1_type -76 113 10 340 247 162 52 chr5 84591764 84592072 -118493460 + L1ME1 LINE L1 5567 5908 -213 982 72 145 0 chr5 84592490 84592628 -118492904 + AluSg/x SINE Alu 153 310 0 330 296 105 23 chr5 84593167 84593339 -118492193 - MER5A DNA MER1_type 0 189 4 2228 106 0 0 chr5 84593837 84594130 -118491402 - AluSx SINE Alu -15 297 5 958 267 27 38 chr5 84594196 84594645 -118490887 - MLT1H LTR MaLR -4 545 22 2061 128 0 7 chr5 84594779 84595068 -118490464 - AluSx SINE Alu -25 287 1 722 167 7 80 chr5 84595192 84595342 -118490190 + FLAM_C SINE Alu 5 143 0 751 174 159 10 chr5 84596019 84596214 -118489318 + MSTB2 LTR MaLR 13 236 -221 2353 152 12 22 chr5 84596214 84596616 -118488916 + MER57A LTR ERV1 1 398 -5 1695 128 56 46 chr5 84596640 84596945 -118488587 + AluSx SINE Alu 1 308 -4 1116 157 13 65 chr5 84596945 84597175 -118488357 + MSTB2 LTR MaLR 240 457 0 2282 125 0 0 chr5 84597457 84597769 -118487763 - AluSx SINE Alu 0 312 1 353 211 79 26 chr5 84597770 84597884 -118487648 + L1ME1 LINE L1 6043 6162 -4 3913 181 36 22 chr5 84597898 84598007 -118487525 + L1MB3 LINE L1 5386 5492 -691 2510 72 0 0 chr5 84598007 84598312 -118487220 + AluY SINE Alu 2 306 -5 3913 181 36 22 chr5 84598312 84598988 -118486544 + L1MB3 LINE L1 5492 6182 -1 314 121 0 17 chr5 84599024 84599082 -118486450 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 187 303 35 42 chr5 84600210 84600352 -118485180 + MER5A DNA MER1_type 44 184 -5 1661 169 11 7 chr5 84600858 84601136 -118484396 + AluSx SINE Alu 18 296 -16 448 254 124 62 chr5 84601390 84601518 -118484014 + L1ME LINE L1 4779 4898 -1223 2204 116 0 3 chr5 84601518 84601821 -118483711 + AluSq SINE Alu 1 302 -11 448 254 124 62 chr5 84601821 84602523 -118483009 + L1ME LINE L1 4898 5669 -452 340 241 222 6 chr5 84602574 84602736 -118482796 + L1MC/D LINE L1 5628 5824 -1984 235 253 12 24 chr5 84602802 84602885 -118482647 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 890 262 99 68 chr5 84603328 84603801 -118481731 + LTR16C LTR ERVL 1 488 -3 1326 90 32 21 chr5 84603801 84603990 -118481542 + MER30 DNA MER1_type 5 195 -35 2467 158 62 51 chr5 84604610 84605302 -118480230 - MER51A LTR ERV1 -9 625 1 1711 148 0 40 chr5 84605418 84605715 -118479817 + AluJb SINE Alu 1 285 -27 384 231 40 0 chr5 84605715 84605888 -118479644 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 0 0 0 chr5 84605888 84605925 -118479607 + AT_rich Low_complexity Low_complexity 1 37 0 1111 90 0 0 chr5 84605925 84606058 -118479474 + AluSg SINE Alu 1 133 -177 2426 90 0 0 chr5 84606058 84606358 -118479174 + AluSx SINE Alu 1 300 -12 773 170 5 87 chr5 84606361 84606439 -118479093 + MER96B DNA MER1_type? 188 271 -146 2250 82 0 39 chr5 84606439 84606744 -118478788 - AluSg SINE Alu -17 293 1 773 170 5 87 chr5 84606744 84606871 -118478661 + MER96B DNA MER1_type? 271 376 -41 227 338 82 26 chr5 84606901 84607132 -118478400 - L2 LINE L2 -1083 2231 1988 2200 110 0 0 chr5 84607742 84608053 -118477479 - AluSx SINE Alu 0 311 1 226 127 16 16 chr5 84608063 84608126 -118477406 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2385 45 7 7 chr5 84608434 84608726 -118476806 + AluY SINE Alu 19 310 -1 2207 112 10 7 chr5 84609017 84609312 -118476220 + AluSx SINE Alu 1 296 -16 492 327 34 10 chr5 84609523 84609728 -118475804 + MIR SINE MIR 53 262 0 2166 93 60 63 chr5 84609740 84609907 -118475625 + THE1B LTR MaLR 1 167 -197 2241 107 0 10 chr5 84609907 84610216 -118475316 + AluSx SINE Alu 2 307 -5 2166 93 60 63 chr5 84610216 84610413 -118475119 + THE1B LTR MaLR 167 364 0 1682 154 22 47 chr5 84610457 84610775 -118474757 + AluJb SINE Alu 1 310 -2 2171 116 0 10 chr5 84610781 84611083 -118474449 + AluSx SINE Alu 5 303 -9 511 251 100 84 chr5 84611107 84611466 -118474066 + MLT1L LTR MaLR 1 365 -250 1740 174 7 0 chr5 84612173 84612471 -118473061 + AluJb SINE Alu 1 300 -12 206 156 22 0 chr5 84612541 84612586 -118472946 + GA-rich Low_complexity Low_complexity 2 47 0 21 36 0 0 chr5 84612669 84612697 -118472835 + AT_rich Low_complexity Low_complexity 1 28 0 4398 146 16 31 chr5 84612742 84613217 -118472315 - L1 LINE L1 -1901 4245 3785 625 145 0 124 chr5 84613217 84613362 -118472170 - FLAM_A SINE Alu -6 127 1 4398 146 16 31 chr5 84613362 84613688 -118471844 - L1 LINE L1 -2361 3785 3456 1980 115 3 3 chr5 84614365 84614651 -118470881 + AluSq SINE Alu 1 286 -27 2182 81 3 19 chr5 84614920 84615230 -118470302 + AluSp SINE Alu 1 305 -8 276 102 0 0 chr5 84615245 84615294 -118470238 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 306 297 25 8 chr5 84615540 84615658 -118469874 - MER112 DNA MER1_type -4 256 137 992 98 0 0 chr5 84615726 84615859 -118469673 + AluSq/x SINE Alu 1 133 -180 855 98 81 0 chr5 84616140 84616263 -118469269 - AluSg/x SINE Alu -11 301 169 896 142 0 0 chr5 84616270 84616404 -118469128 - AluSg/x SINE Alu -8 302 169 5013 204 28 5 chr5 84616499 84617611 -118467921 + L1PA16 LINE L1 4137 5273 -873 1050 127 19 0 chr5 84617613 84617770 -118467762 + FRAM SINE Alu 1 159 -17 337 55 182 0 chr5 84617773 84617828 -118467704 + L1P LINE L1 5265 5329 -837 1127 110 0 0 chr5 84617828 84617982 -118467550 + AluSp SINE Alu 140 293 -20 1793 124 3 60 chr5 84617992 84618307 -118467225 + AluSx SINE Alu 1 297 -15 2208 80 3 10 chr5 84618307 84618607 -118466925 + AluY SINE Alu 1 298 -13 4991 106 10 89 chr5 84618607 84618777 -118466755 + L1PA16 LINE L1 5322 5504 -662 2127 106 10 3 chr5 84618777 84619080 -118466452 + AluSp SINE Alu 1 305 -8 4991 106 10 89 chr5 84619080 84619681 -118465851 + L1PA16 LINE L1 5504 6012 -154 1944 111 4 0 chr5 84619681 84619994 -118465538 + AluSx SINE Alu 1 314 0 4991 106 10 89 chr5 84619994 84620138 -118465394 + L1PA16 LINE L1 6012 6166 0 433 269 36 18 chr5 84620932 84621099 -118464433 + HAL1 LINE L1 1550 1719 -788 1561 138 73 7 chr5 84621212 84621487 -118464045 + AluJb SINE Alu 1 293 -19 2149 105 10 0 chr5 84621489 84621795 -118463737 + AluSg SINE Alu 1 309 -1 2384 68 0 34 chr5 84621816 84622140 -118463392 + AluSq SINE Alu 1 313 0 2253 88 3 0 chr5 84622314 84622620 -118462912 + AluSp SINE Alu 2 308 -5 2656 29 3 0 chr5 84622631 84622941 -118462591 + AluY SINE Alu 1 311 0 1001 206 49 16 chr5 84623573 84623816 -118461716 + AluJo SINE Alu 40 290 -22 2135 110 10 0 chr5 84623825 84624126 -118461406 - AluSx SINE Alu -8 304 1 382 229 12 0 chr5 84624175 84624258 -118461274 + L1MC4 LINE L1 7807 7890 -152 431 315 138 22 chr5 84624263 84624511 -118461021 + L2 LINE L2 2758 2976 -337 1736 171 7 3 chr5 84624511 84624821 -118460711 - AluJo SINE Alu -1 311 1 431 315 138 22 chr5 84624821 84625080 -118460452 + L2 LINE L2 2976 3313 0 2201 92 7 10 chr5 84625474 84625779 -118459753 + AluSx SINE Alu 1 304 -8 2023 142 0 0 chr5 84625983 84626294 -118459238 - AluY SINE Alu 0 311 1 2100 122 0 25 chr5 84626710 84627029 -118458503 + AluSx SINE Alu 1 311 -1 270 0 0 0 chr5 84627029 84627059 -118458473 + (TA)n Simple_repeat Simple_repeat 2 31 0 1945 124 10 0 chr5 84627159 84627450 -118458082 + AluSq SINE Alu 1 294 -19 693 45 11 0 chr5 84627794 84627933 -118457599 - AluY SINE Alu 0 333 194 244 250 54 0 chr5 84628309 84628365 -118457167 + L1ME3A LINE L1 5708 5766 -404 1714 190 0 0 chr5 84628366 84628666 -118456866 + AluJb SINE Alu 1 300 -12 1589 147 12 69 chr5 84628671 84628812 -118456720 + AluJo SINE Alu 1 148 -164 2115 114 0 0 chr5 84628812 84629109 -118456423 + AluSc SINE Alu 1 297 -12 1589 147 12 69 chr5 84629109 84629286 -118456246 + AluJo SINE Alu 148 301 -11 417 268 0 0 chr5 84629297 84629398 -118456134 + AluS SINE Alu 1 82 -220 4005 80 33 6 chr5 84629398 84629937 -118455595 + MER41A LTR ERV1 1 554 0 3454 155 116 10 chr5 84629937 84630573 -118454959 + MER41A-int LTR ERV1 1 606 -5340 258 32 0 0 chr5 84630574 84630605 -118454927 + (TC)n Simple_repeat Simple_repeat 1 31 0 277 79 0 0 chr5 84630612 84630650 -118454882 + MER41A-int LTR ERV1 1096 1133 -4813 2097 101 7 3 chr5 84630650 84630958 -118454574 + AluSx SINE Alu 3 311 -1 1732 142 18 11 chr5 84630959 84631240 -118454292 + MER51-int LTR ERV1 3275 3557 -4259 594 208 42 48 chr5 84631240 84631433 -118454099 + L1ME3A LINE L1 5764 5937 -233 1722 149 40 0 chr5 84631437 84631733 -118453799 + AluSx SINE Alu 1 308 -4 1710 165 0 4 chr5 84631767 84632046 -118453486 - AluJo SINE Alu -29 283 6 4679 150 52 58 chr5 84632091 84632667 -118452865 - MER4D LTR ERV1 0 903 334 697 125 0 0 chr5 84632667 84632771 -118452761 + U13 snRNA snRNA 1 104 0 4679 150 52 58 chr5 84632771 84633103 -118452429 - MER4D LTR ERV1 -569 334 1 612 214 37 75 chr5 84633103 84633250 -118452282 + L1ME3A LINE L1 5980 6120 -50 1833 166 0 0 chr5 84633250 84633546 -118451986 - AluSx SINE Alu -16 296 1 612 214 37 75 chr5 84633546 84633585 -118451947 + L1ME3A LINE L1 6120 6159 -11 25 51 0 0 chr5 84633591 84633630 -118451902 + AT_rich Low_complexity Low_complexity 1 39 0 206 231 0 0 chr5 84633706 84633745 -118451787 + (CA)n Simple_repeat Simple_repeat 2 40 0 2364 73 0 0 chr5 84633792 84634095 -118451437 + AluY SINE Alu 1 303 -8 2118 107 3 0 chr5 84634570 84634860 -118450672 - AluSx SINE Alu -21 291 1 243 222 178 33 chr5 84634860 84634950 -118450582 - MER5A DNA MER1_type -37 152 50 2626 48 0 0 chr5 84634985 84635296 -118450236 + AluSq SINE Alu 1 311 -2 2416 64 0 0 chr5 84635296 84635593 -118449939 + AluY SINE Alu 1 297 -14 1087 195 55 49 chr5 84635612 84635997 -118449535 + MLT2B1 LTR ERVL 12 478 -42 549 247 37 49 chr5 84636048 84636210 -118449322 + L1ME LINE L1 391 550 -5520 1722 175 0 0 chr5 84636220 84636506 -118449026 + AluJb SINE Alu 1 286 -26 2051 116 3 0 chr5 84636517 84636811 -118448721 + AluSp SINE Alu 1 295 -18 27 0 0 0 chr5 84636815 84636842 -118448690 + AT_rich Low_complexity Low_complexity 1 27 0 287 345 11 0 chr5 84637113 84637200 -118448332 - LTR67 LTR ERVL -367 190 103 536 78 13 0 chr5 84637341 84637418 -118448114 - Alu SINE Alu -11 300 223 2324 67 0 7 chr5 84637419 84637718 -118447814 - AluY SINE Alu -14 297 1 268 143 0 0 chr5 84637718 84637760 -118447772 - AluSx SINE Alu -14 288 247 2110 104 83 8 chr5 84637760 84638135 -118447397 - LTR7 LTR ERV1 0 450 1 1403 142 4 4 chr5 84638137 84638363 -118447169 - AluSx SINE Alu -63 249 24 1648 227 98 30 chr5 84638487 84638959 -118446573 + MLT1D LTR MaLR 1 504 -1 524 191 82 9 chr5 84640298 84640408 -118445124 - L2 LINE L2 0 3313 3196 261 224 184 0 chr5 84640431 84640507 -118445025 - L2 LINE L2 -978 2336 2247 212 329 0 0 chr5 84640705 84640787 -118444745 + CT-rich Low_complexity Low_complexity 3 84 0 4325 58 7 35 chr5 84640982 84641166 -118444366 - MER41A LTR ERV1 0 554 366 2166 96 0 29 chr5 84641166 84641479 -118444053 - AluSq SINE Alu 0 313 10 4325 58 7 35 chr5 84641479 84641675 -118443857 - MER41A LTR ERV1 -188 366 193 2284 93 3 0 chr5 84641675 84641986 -118443546 - AluSp SINE Alu -1 312 1 4325 58 7 35 chr5 84641986 84642174 -118443358 - MER41A LTR ERV1 -361 193 1 2151 105 0 0 chr5 84642339 84642634 -118442898 - AluY SINE Alu -6 305 11 1615 152 90 4 chr5 84642667 84642944 -118442588 - AluJb SINE Alu -11 301 1 314 154 0 15 chr5 84643042 84643107 -118442425 + CT-rich Low_complexity Low_complexity 1 64 0 1857 120 18 0 chr5 84643107 84643381 -118442151 - AluSx SINE Alu -33 279 1 258 240 106 0 chr5 84643383 84643487 -118442045 - L1ME4a LINE L1 0 6121 6007 381 251 79 63 chr5 84643529 84643841 -118441691 - MLT1H LTR MaLR -16 551 147 1500 146 4 39 chr5 84643843 84643938 -118441594 + AluJo SINE Alu 31 128 -184 2141 102 14 0 chr5 84643938 84644232 -118441300 - AluSp SINE Alu -14 299 2 1500 146 4 39 chr5 84644232 84644396 -118441136 + AluJo SINE Alu 128 281 -31 1964 117 0 25 chr5 84644398 84644714 -118440818 - AluSg SINE Alu -2 308 1 264 212 282 12 chr5 84644763 84644848 -118440684 - MER5A DNA MER1_type -6 183 76 365 257 18 45 chr5 84644856 84644989 -118440543 - MIR SINE MIR -79 129 4 834 165 0 0 chr5 84645176 84645309 -118440223 - FLAM_C SINE Alu 0 133 1 2243 83 3 13 chr5 84645453 84645755 -118439777 + AluSq SINE Alu 1 299 -14 470 240 112 16 chr5 84645791 84645916 -118439616 - MIR SINE MIR -69 193 57 2050 94 26 19 chr5 84646170 84646479 -118439053 + AluSq SINE Alu 1 311 -2 2468 47 0 0 chr5 84646547 84646847 -118438685 - AluY SINE Alu -11 300 1 1623 163 3 26 chr5 84646935 84647242 -118438290 + AluJo SINE Alu 1 300 -12 21 57 0 0 chr5 84647395 84647430 -118438102 + AT_rich Low_complexity Low_complexity 1 35 0 410 174 0 157 chr5 84647435 84647550 -118437982 - AluSq/x SINE Alu -185 117 21 271 217 93 29 chr5 84647560 84647681 -118437851 - MIR SINE MIR -47 215 7 2396 52 0 16 chr5 84647790 84648096 -118437436 + AluY SINE Alu 1 301 -10 441 238 38 38 chr5 84648381 84648486 -118437046 - L2 LINE L2 0 3272 3168 2288 91 0 3 chr5 84648924 84649232 -118436300 - AluSq SINE Alu -6 307 1 381 310 39 60 chr5 84649339 84649571 -118435961 - L2 LINE L2 -8 3305 3079 758 139 0 25 chr5 84649610 84649732 -118435800 + FLAM_C SINE Alu 22 140 -3 1968 270 210 17 chr5 84649741 84650814 -118434718 - L2 LINE L2 -262 3051 1750 969 74 0 67 chr5 84650814 84650963 -118434569 + AluSg SINE Alu 1 139 -171 2097 103 3 0 chr5 84651075 84651366 -118434166 + AluSg SINE Alu 1 292 -18 840 162 7 15 chr5 84651376 84651512 -118434020 + AluJo SINE Alu 2 136 -176 1730 153 0 81 chr5 84651512 84651846 -118433686 + AluJo SINE Alu 1 307 -5 625 306 78 19 chr5 84651864 84652132 -118433400 - L2 LINE L2 -1618 1696 1413 316 209 12 58 chr5 84652173 84652259 -118433273 + HsTC2 DNA Tc2 6 87 -1811 2294 76 0 0 chr5 84652259 84652577 -118432955 + AluY SINE Alu 1 318 0 331 287 96 22 chr5 84653303 84653439 -118432093 - L2 LINE L2 0 3313 3168 1988 98 3 19 chr5 84653452 84653759 -118431773 - AluSp SINE Alu -11 302 1 880 212 42 62 chr5 84653773 84653866 -118431666 - MIR SINE MIR -2 260 167 2253 112 0 0 chr5 84653866 84654171 -118431361 + AluSx SINE Alu 2 306 -6 880 212 42 62 chr5 84654171 84654336 -118431196 - MIR SINE MIR -95 167 7 2641 156 129 2 chr5 84654404 84654899 -118430633 - LTR64 LTR ERVK 0 558 1 2593 39 0 3 chr5 84655297 84655609 -118429923 + AluY SINE Alu 1 311 0 392 169 101 79 chr5 84655660 84655749 -118429783 + FRAM SINE Alu 43 117 -49 450 257 105 35 chr5 84657185 84657255 -118428277 - MIR SINE MIR -66 196 132 2121 114 0 16 chr5 84657255 84657572 -118427960 + AluSx SINE Alu 1 312 0 450 257 105 35 chr5 84657572 84657672 -118427860 - MIR SINE MIR -130 132 14 1914 99 96 0 chr5 84658145 84658427 -118427105 + AluSx SINE Alu 1 309 -3 22 35 0 0 chr5 84658552 84658581 -118426951 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 84658681 84658709 -118426823 + AT_rich Low_complexity Low_complexity 1 28 0 1833 159 3 0 chr5 84658983 84659284 -118426248 - AluSg SINE Alu -8 302 1 1709 125 135 7 chr5 84659379 84659683 -118425849 - MER61A LTR ERV1 0 343 1 5312 95 16 55 chr5 84660097 84661222 -118424310 + SVA Other Other 1 866 -520 6253 65 13 44 chr5 84661239 84662212 -118423320 + SVA Other Other 433 1375 -11 24 0 0 0 chr5 84662212 84662236 -118423296 + AT_rich Low_complexity Low_complexity 1 24 0 2024 99 3 14 chr5 84662241 84662534 -118422998 + AluSg SINE Alu 3 292 -18 1945 117 19 31 chr5 84663084 84663401 -118422131 - AluSq SINE Alu 0 313 1 2046 104 28 0 chr5 84663418 84663706 -118421826 - AluSx SINE Alu -16 296 1 1543 189 29 0 chr5 84663718 84663999 -118421533 - AluJo SINE Alu -23 289 1 1941 236 36 45 chr5 84663999 84664311 -118421221 - L2 LINE L2 -854 2460 2154 1953 141 3 7 chr5 84664311 84664615 -118420917 + AluJb SINE Alu 2 304 -8 1941 236 36 45 chr5 84664615 84664905 -118420627 - L2 LINE L2 -1160 2154 1863 472 267 0 47 chr5 84665459 84665609 -118419923 - MIR SINE MIR -12 250 108 205 245 0 19 chr5 84665844 84665897 -118419635 - L2 LINE L2 -11 3302 3251 704 164 0 0 chr5 84666029 84666145 -118419387 + FLAM_C SINE Alu 3 118 -15 531 263 64 13 chr5 84666175 84666331 -118419201 - L3 LINE CR1 -193 1384 1221 2063 98 11 0 chr5 84666408 84666695 -118418837 + AluSg SINE Alu 2 291 -19 488 288 23 0 chr5 84666911 84667043 -118418489 + MIR SINE MIR 74 208 -54 198 315 176 0 chr5 84669826 84669934 -118415598 + L2 LINE L2 3145 3271 -1 1910 121 19 19 chr5 84670109 84670416 -118415116 - AluSx SINE Alu -1 311 5 231 246 192 43 chr5 84670425 84670759 -118414773 - L1ME4a LINE L1 0 6121 5725 2028 141 0 0 chr5 84670759 84671057 -118414475 - AluSx SINE Alu -14 298 1 231 246 192 43 chr5 84671057 84671092 -118414440 - L1ME4a LINE L1 -396 5725 5697 23 0 0 0 chr5 84671460 84671483 -118414049 + AT_rich Low_complexity Low_complexity 1 23 0 1014 84 8 0 chr5 84671489 84671620 -118413912 + AluY SINE Alu 1 132 -179 333 125 0 47 chr5 84671774 84671838 -118413694 + Alu SINE Alu 236 296 -6 1965 133 0 26 chr5 84671965 84672273 -118413259 - AluSx SINE Alu -12 300 1 2255 78 0 0 chr5 84672408 84672701 -118412831 - AluY SINE Alu -13 298 6 418 197 141 42 chr5 84672766 84672908 -118412624 - AluYa5 SINE Alu -20 291 136 1927 102 15 4 chr5 84672946 84673220 -118412312 - AluSg SINE Alu -31 279 3 527 306 31 14 chr5 84673225 84673447 -118412085 - L1MC/D LINE L1 -2042 5766 5541 1326 106 5 5 chr5 84673693 84673881 -118411651 - AluSc SINE Alu -121 188 1 287 233 87 47 chr5 84674558 84674708 -118410824 - L1MC5 LINE L1 -33 7928 7773 1842 171 60 47 chr5 84674758 84675094 -118410438 - L1MB7 LINE L1 -9 6175 5845 1681 116 32 0 chr5 84675094 84675344 -118410188 - AluSx SINE Alu -16 296 39 1842 171 60 47 chr5 84675344 84675443 -118410089 - L1MB7 LINE L1 -339 5845 5731 1372 184 60 3 chr5 84675443 84675726 -118409806 - AluJo SINE Alu -13 299 1 1842 171 60 47 chr5 84675726 84675740 -118409792 - L1MB7 LINE L1 -453 5731 5719 1126 45 0 0 chr5 84675775 84675907 -118409625 + AluY SINE Alu 1 132 -179 384 206 0 118 chr5 84676035 84676083 -118409449 - L1MB7 LINE L1 -571 5603 5551 221 0 35 0 chr5 84676083 84676112 -118409420 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1893 132 4 0 chr5 84676115 84676395 -118409137 - AluSx SINE Alu -31 281 1 384 206 0 118 chr5 84676395 84676444 -118409088 - L1MB7 LINE L1 -625 5549 5514 820 170 56 145 chr5 84676448 84676604 -118408928 - L1MC5 LINE L1 -186 7775 7607 1560 180 16 29 chr5 84676604 84676920 -118408612 - AluJo SINE Alu 0 312 1 820 170 56 145 chr5 84676920 84676960 -118408572 - L1MC5 LINE L1 -354 7607 7565 2215 112 0 0 chr5 84676960 84677256 -118408276 + AluSx SINE Alu 1 296 -16 820 170 56 145 chr5 84677256 84677390 -118408142 - L1MC5 LINE L1 -396 7565 7498 740 179 0 8 chr5 84677390 84677524 -118408008 - FLAM_C SINE Alu 0 133 1 820 170 56 145 chr5 84677524 84677674 -118407858 - L1MC5 LINE L1 -463 7498 7336 577 248 71 19 chr5 84677796 84678006 -118407526 - MER112 DNA MER1_type -39 221 1 21 0 0 0 chr5 84678017 84678038 -118407494 + AT_rich Low_complexity Low_complexity 1 21 0 1217 224 108 64 chr5 84678107 84678400 -118407132 - MLT1D LTR MaLR -2 503 179 2162 109 0 0 chr5 84678400 84678702 -118406830 - AluSg SINE Alu -8 302 1 1217 224 108 64 chr5 84678702 84678890 -118406642 - MLT1D LTR MaLR -326 179 1 1988 116 27 0 chr5 84679662 84679954 -118405578 - AluSx SINE Alu -12 300 1 938 131 0 0 chr5 84680019 84680149 -118405383 + FLAM_C SINE Alu 2 131 -2 1443 167 73 0 chr5 84680449 84680724 -118404808 + AluJo SINE Alu 1 295 -17 259 316 105 23 chr5 84682292 84682425 -118403107 - MIR3 SINE MIR -10 198 55 1723 132 7 26 chr5 84682488 84682760 -118402772 + AluSx SINE Alu 1 267 -45 374 238 135 32 chr5 84682778 84682904 -118402628 + MER5A DNA MER1_type 51 189 0 29 70 0 0 chr5 84683378 84683435 -118402097 + AT_rich Low_complexity Low_complexity 1 57 0 2248 91 0 0 chr5 84683568 84683866 -118401666 + AluSq SINE Alu 1 298 -15 397 287 205 8 chr5 84684232 84684476 -118401056 - L1ME LINE L1 -406 5715 5424 331 238 71 0 chr5 84684623 84684707 -118400825 + MIR SINE MIR 115 204 -58 25 0 0 0 chr5 84684716 84684741 -118400791 + AT_rich Low_complexity Low_complexity 1 25 0 1505 180 6 30 chr5 84684997 84685325 -118400207 - 7SLRNA srpRNA srpRNA 0 320 1 825 156 0 15 chr5 84685498 84685633 -118399899 - FLAM_C SINE Alu 0 133 1 1944 86 0 21 chr5 84685840 84686120 -118399412 + AluY SINE Alu 37 310 -1 472 103 0 15 chr5 84686241 84686309 -118399223 - AluS SINE Alu -244 68 2 610 111 0 11 chr5 84687318 84687408 -118398124 + MER4A LTR ERV1 1 89 -575 301 51 26 0 chr5 84687414 84687453 -118398079 + MER4A LTR ERV1 261 300 -364 2123 79 0 79 chr5 84687453 84687783 -118397749 + AluSg SINE Alu 1 304 -6 1148 154 11 27 chr5 84687806 84687987 -118397545 + MER4A LTR ERV1 373 550 -114 1684 116 26 71 chr5 84687987 84688343 -118397189 - MER4A LTR ERV1 0 664 261 551 163 20 20 chr5 84688343 84688441 -118397091 - MER4A LTR ERV1 -566 98 1 * 927 74 0 16 chr5 84688441 84688561 -118396971 + MER4A LTR ERV1 547 664 0 601 179 0 60 chr5 84688874 84689008 -118396524 + FAM SINE Alu 1 48 -1 306 150 175 83 chr5 84689013 84689133 -118396399 + L1MC/D LINE L1 5350 5480 -879 2251 209 76 29 chr5 84689289 84689801 -118395731 - MLT1F LTR MaLR 0 542 7 1093 294 251 33 chr5 84689976 84690413 -118395119 - L2 LINE L2 0 3313 2973 2358 71 0 0 chr5 84690413 84690708 -118394824 + AluSg SINE Alu 1 295 -15 1093 294 251 33 chr5 84690708 84691026 -118394506 - L2 LINE L2 -340 2973 2726 1694 157 31 10 chr5 84691026 84691319 -118394213 + AluJb SINE Alu 1 299 -13 1093 294 251 33 chr5 84691319 84691336 -118394196 - L2 LINE L2 -587 2726 2714 3861 78 31 24 chr5 84691336 84691748 -118393784 - MER41A LTR ERV1 0 554 136 2182 87 7 7 chr5 84691748 84692047 -118393485 - AluSq SINE Alu -14 299 1 3861 78 31 24 chr5 84692047 84692184 -118393348 - MER41A LTR ERV1 -418 136 1 1093 294 251 33 chr5 84692184 84692624 -118392908 - L2 LINE L2 -599 2714 1718 1325 171 8 8 chr5 84692678 84692936 -118392596 + AluJo SINE Alu 50 307 -5 314 327 135 0 chr5 84692936 84693092 -118392440 - L1MC/D LINE L1 -2176 5632 5456 3891 64 0 62 chr5 84693176 84693721 -118391811 + MER9 LTR ERVK 1 511 0 2014 123 0 37 chr5 84694420 84694744 -118390788 - AluSx SINE Alu 0 312 1 2135 116 0 0 chr5 84694769 84695080 -118390452 - AluSx SINE Alu -1 311 1 999 211 197 24 chr5 84695122 84695539 -118389993 - L1MC5 LINE L1 -76 7885 7397 216 0 0 0 chr5 84695917 84695941 -118389591 + (TTAA)n Simple_repeat Simple_repeat 4 27 0 1613 154 3 17 chr5 84695943 84696236 -118389296 - AluJo SINE Alu -23 289 1 1131 108 13 0 chr5 84696250 84696408 -118389124 - AluSg/x SINE Alu -15 295 136 409 256 169 20 chr5 84696673 84696868 -118388664 - LTR67 LTR ERVL 0 557 334 250 172 69 0 chr5 84697616 84697674 -118387858 - MLT1F1 LTR MaLR 0 567 506 1664 81 0 0 chr5 84697784 84697994 -118387538 - AluSq SINE Alu -103 210 1 302 353 139 16 chr5 84698215 84698459 -118387073 - L3b LINE CR1 -131 1452 1179 267 31 0 0 chr5 84698480 84698512 -118387020 + (TG)n Simple_repeat Simple_repeat 2 33 0 267 131 66 49 chr5 84698519 84698580 -118386952 - L1MC5 LINE L1 -44 7917 7856 265 208 104 13 chr5 84698751 84698828 -118386704 + MER51C LTR ERV1 346 429 -211 1931 110 0 32 chr5 84698874 84699183 -118386349 + AluSx SINE Alu 3 301 -11 303 254 32 0 chr5 84699206 84699269 -118386263 + MER51A LTR ERV1 469 533 -101 323 44 22 0 chr5 84699369 84699414 -118386118 + LTR9B LTR ERV1 32 77 -567 2400 71 0 3 chr5 84699438 84699746 -118385786 - AluY SINE Alu -4 307 1 288 108 0 0 chr5 84699748 84699785 -118385747 - Alu SINE Alu -264 38 2 890 88 88 0 chr5 84699785 84699910 -118385622 + LTR9B LTR ERV1 59 194 -450 * 3159 148 24 8 chr5 84699908 84700414 -118385118 + LTR9B LTR ERV1 131 644 0 384 105 0 0 chr5 84701096 84701153 -118384379 - Alu SINE Alu -4 297 241 324 194 28 0 chr5 84701254 84701326 -118384206 - L1 LINE L1 -844 6721 6648 * 7461 147 13 29 chr5 84701325 84701535 -118383997 - L1 LINE L1 -1298 6267 6055 1954 106 40 10 chr5 84701535 84701837 -118383695 + AluY SINE Alu 1 311 0 7461 147 13 29 chr5 84701837 84702518 -118383014 - L1 LINE L1 -1510 6055 5402 2018 93 6 51 chr5 84702518 84702830 -118382702 - AluSp SINE Alu -15 298 1 7461 147 13 29 chr5 84702830 84703289 -118382243 - L1 LINE L1 -2163 5402 4937 1916 120 36 26 chr5 84703289 84703598 -118381934 - AluSp SINE Alu -1 312 1 1025 139 0 0 chr5 84703600 84703773 -118381759 - L1 LINE L1 -3890 3675 3503 2111 109 10 0 chr5 84703990 84704292 -118381240 + AluSx SINE Alu 1 305 -7 2083 126 0 7 chr5 84704292 84704601 -118380931 + AluSc SINE Alu 1 308 -1 1429 183 95 52 chr5 84704670 84705090 -118380442 + LTR7 LTR ERV1 3 440 -10 3397 164 40 47 chr5 84705100 84705944 -118379588 + HERVH LTR ERV1 1 838 -6875 4224 207 44 61 chr5 84706077 84707794 -118377738 + HERVH LTR ERV1 458 2039 -4615 873 105 32 0 chr5 84707894 84708018 -118377514 - AluSg SINE Alu -182 128 1 2459 140 23 44 chr5 84708464 84708534 -118376998 - MSTA LTR MaLR -1 427 357 1898 145 0 26 chr5 84708534 84708844 -118376688 + AluSx SINE Alu 1 302 -10 2459 140 23 44 chr5 84708844 84709209 -118376323 - MSTA LTR MaLR -71 357 1 9651 150 30 27 chr5 84709211 84710849 -118374683 - MSTA-int LTR MaLR -8 1643 1 2159 118 59 21 chr5 84710849 84711188 -118374344 - MSTA LTR MaLR 0 428 77 18002 145 63 18 chr5 84711288 84714363 -118371169 - L1M1 LINE L1 -4339 3226 15 202 269 128 0 chr5 84714496 84714574 -118370958 - MIR SINE MIR -160 102 15 2148 131 10 0 chr5 84714613 84714919 -118370613 - AluSx SINE Alu -2 310 2 258 32 0 0 chr5 84715377 84715408 -118370124 + (GA)n Simple_repeat Simple_repeat 1 31 0 242 212 15 0 chr5 84715785 84715851 -118369681 + L1MA7 LINE L1 5988 6054 -237 785 169 135 0 chr5 84715853 84716001 -118369531 - AluSg/x SINE Alu -5 307 140 344 245 31 0 chr5 84716007 84716105 -118369427 + MIR SINE MIR 162 262 0 419 231 38 86 chr5 84717053 84717239 -118368293 + Charlie8 DNA MER1_type 104 280 -2137 1958 145 6 19 chr5 84717470 84717781 -118367751 + AluSx SINE Alu 1 307 -5 575 239 105 81 chr5 84718279 84718500 -118367032 + MLT1L LTR MaLR 263 485 -26 417 73 18 0 chr5 84718500 84718555 -118366977 + MSTA LTR MaLR 1 56 -372 1485 137 0 5 chr5 84718555 84718766 -118366766 + AluSx SINE Alu 1 210 -102 3521 83 17 81 chr5 84718869 84719244 -118366288 + L1MA1 LINE L1 5758 6085 -217 2120 112 33 3 chr5 84719244 84719548 -118365984 + AluSq SINE Alu 1 313 0 3521 83 17 81 chr5 84719548 84719753 -118365779 + L1MA1 LINE L1 6085 6301 -1 26 0 0 0 chr5 84719753 84719779 -118365753 + AT_rich Low_complexity Low_complexity 1 26 0 324 179 192 60 chr5 84720356 84720421 -118365111 - L1ME4a LINE L1 -2 6119 6064 2307 83 24 0 chr5 84720421 84720711 -118364821 + AluSp SINE Alu 5 301 -12 324 179 192 60 chr5 84720711 84720796 -118364736 - L1ME4a LINE L1 -57 6064 5949 2510 121 115 12 chr5 84720822 84721376 -118364156 - MER4E LTR ERV1 0 766 3 1338 177 5 0 chr5 84721750 84721959 -118363573 - AluJb SINE Alu -17 295 86 1505 171 75 136 chr5 84722163 84722833 -118362699 + MER4A LTR ERV1 1 462 -3 192 77 0 0 chr5 84723112 84723138 -118362394 + (CACCAT)n Simple_repeat Simple_repeat 5 30 0 194 333 40 40 chr5 84723207 84723384 -118362148 - MER5A DNA MER1_type -5 184 8 401 132 15 0 chr5 84723701 84723769 -118361763 + MER5A DNA MER1_type 32 100 -89 505 285 28 34 chr5 84723887 84724066 -118361466 - MER5B DNA MER1_type 0 178 1 2249 120 3 3 chr5 84724143 84724452 -118361080 + AluSx SINE Alu 1 309 -3 274 345 0 9 chr5 84724456 84724572 -118360960 + L2 LINE L2 2736 2850 -464 921 181 12 0 chr5 84724635 84724795 -118360737 - FRAM SINE Alu -7 169 8 1586 113 5 5 chr5 84725019 84725232 -118360300 + AluSg/x SINE Alu 76 288 -24 1264 199 59 44 chr5 84725253 84725756 -118359776 - L1ME1 LINE L1 -185 5981 5369 1961 119 16 50 chr5 84725756 84726075 -118359457 - AluSg SINE Alu -2 308 1 1264 199 59 44 chr5 84726075 84726232 -118359300 - L1ME1 LINE L1 -797 5369 5216 702 195 0 8 chr5 84726242 84726365 -118359167 - AluJ SINE Alu -20 292 171 1461 112 0 5 chr5 84726365 84726562 -118358970 - AluSq SINE Alu -58 255 60 980 157 17 52 chr5 84726713 84726885 -118358647 - AluJ SINE Alu -146 166 1 831 196 40 87 chr5 84726888 84727011 -118358521 - L1ME1 LINE L1 -945 5201 5074 996 189 53 10 chr5 84727011 84727217 -118358315 + MER20 DNA MER1_type 1 215 -4 831 196 40 87 chr5 84727217 84727242 -118358290 - L1ME1 LINE L1 -1072 5074 5049 812 196 0 0 chr5 84727242 84727375 -118358157 - FLAM_A SINE Alu 0 133 1 831 196 40 87 chr5 84727375 84727442 -118358090 - L1ME1 LINE L1 -1097 5049 4998 2263 126 0 0 chr5 84727442 84727752 -118357780 - AluY SINE Alu -1 310 1 831 196 40 87 chr5 84727752 84727810 -118357722 - L1ME1 LINE L1 -1148 4998 4939 1830 177 3 3 chr5 84727871 84728170 -118357362 - AluJb SINE Alu -13 299 1 2684 136 66 66 chr5 84728198 84728670 -118356862 - L1MA9 LINE L1 -9 6303 5832 2169 124 0 0 chr5 84728670 84728968 -118356564 - AluSg SINE Alu -9 301 4 2684 136 66 66 chr5 84728968 84729017 -118356515 - L1MA9 LINE L1 -480 5832 5784 519 17 0 0 chr5 84729017 84729077 -118356455 + (TA)n Simple_repeat Simple_repeat 1 60 0 2684 136 66 66 chr5 84729077 84729141 -118356391 - L1MA9 LINE L1 -527 5785 5717 902 206 43 57 chr5 84729148 84729347 -118356185 - L1ME1 LINE L1 -1199 4947 4752 2383 88 0 0 chr5 84729347 84729643 -118355889 - AluY SINE Alu -15 296 1 902 206 43 57 chr5 84729643 84729725 -118355807 - L1ME1 LINE L1 -1394 4752 4670 3098 140 47 44 chr5 84729902 84729934 -118355598 - MER4D LTR ERV1 -110 793 763 1845 161 3 36 chr5 84729934 84730239 -118355293 - AluJo SINE Alu -17 295 1 3098 140 47 44 chr5 84730239 84730367 -118355165 - MER4D LTR ERV1 -140 763 637 2278 108 0 13 chr5 84730367 84730673 -118354859 + AluSx SINE Alu 1 302 -10 3098 140 47 44 chr5 84730673 84731214 -118354318 - MER4D LTR ERV1 -266 637 19 885 171 0 0 chr5 84731214 84731354 -118354178 - FLAM_C SINE Alu -3 140 1 403 244 0 35 chr5 84731442 84731557 -118353975 + L2 LINE L2 2231 2341 -973 2779 178 75 0 chr5 84731564 84732082 -118353450 - LTR64 LTR ERVK 0 558 2 2160 123 0 13 chr5 84732156 84732457 -118353075 - AluSx SINE Alu -15 297 1 197 253 130 58 chr5 84732485 84732639 -118352893 + L2 LINE L2 2550 2714 -600 288 284 64 9 chr5 84732983 84733092 -118352440 + L2 LINE L2 3158 3272 0 2147 133 0 0 chr5 84733270 84733570 -118351962 + AluSx SINE Alu 1 300 -12 2197 114 34 0 chr5 84734312 84734609 -118350923 + AluSx SINE Alu 1 307 -5 751 195 31 0 chr5 84734938 84735113 -118350419 + L1MA10 LINE L1 5988 6333 -1 207 333 0 14 chr5 84735120 84735189 -118350343 - MIR SINE MIR -102 106 39 2928 126 32 22 chr5 84735346 84735807 -118349725 - Tigger3b DNA MER2_type -1 1231 766 2691 154 78 47 chr5 84735787 84735809 -118349723 - Tigger3b DNA MER2_type -2460 568 548 * 2126 145 0 0 chr5 84735809 84736113 -118349419 + AluSq SINE Alu 1 304 -9 2691 154 78 47 chr5 84736113 84736347 -118349185 - Tigger3b DNA MER2_type -2480 548 323 2162 117 3 0 chr5 84736347 84736638 -118348894 + AluSg SINE Alu 1 292 -18 2691 154 78 47 chr5 84736638 84736651 -118348881 - Tigger3b DNA MER2_type -2705 323 312 2062 144 3 6 chr5 84736651 84736963 -118348569 + AluSx SINE Alu 1 311 -1 2691 154 78 47 chr5 84736963 84737242 -118348290 - Tigger3b DNA MER2_type -2716 312 1 2505 53 0 0 chr5 84737516 84737830 -118347702 + AluY SINE Alu 1 314 0 240 261 23 23 chr5 84737927 84738015 -118347517 + MIR3 SINE MIR 115 202 -6 5969 111 3 25 chr5 84738356 84739286 -118346246 + HERVH LTR ERV1 2086 2995 -4718 3994 128 5 2 chr5 84739265 84739860 -118345672 + HERVH LTR ERV1 3140 3736 -3977 * 6675 106 2 6 chr5 84739870 84740802 -118344730 + HERVH LTR ERV1 3995 4910 -2803 1403 192 4 7 chr5 84740802 84741073 -118344459 + HERVH LTR ERV1 5747 6016 -1697 288 159 175 16 chr5 84741066 84741129 -118344403 + HERVH LTR ERV1 7157 7229 -484 * 3123 97 0 0 chr5 84741129 84741552 -118343980 + HERVH LTR ERV1 7196 7618 -95 783 278 115 45 chr5 84741552 84741649 -118343883 + L2 LINE L2 1822 1911 -1403 1377 167 107 65 chr5 84741649 84742081 -118343451 + LTR7 LTR ERV1 1 450 0 783 278 115 45 chr5 84742081 84742541 -118342991 + L2 LINE L2 1911 2418 -896 622 247 111 90 chr5 84742573 84743050 -118342482 - MLT1J LTR MaLR -12 499 13 893 278 28 17 chr5 84743061 84743352 -118342180 + L2 LINE L2 2457 2750 -564 505 229 49 13 chr5 84743355 84743600 -118341932 - LTR16C LTR ERVL 0 491 211 650 161 9 0 chr5 84744804 84744916 -118340616 + MER53 DNA DNA 1 113 -76 2137 127 0 7 chr5 84745311 84745610 -118339922 + AluSx SINE Alu 1 297 -15 2409 47 0 24 chr5 84746794 84747091 -118338441 + AluY SINE Alu 4 293 -18 25 31 0 0 chr5 84747260 84747292 -118338240 + AT_rich Low_complexity Low_complexity 1 32 0 2105 108 42 0 chr5 84748384 84748670 -118336862 + AluSx SINE Alu 1 298 -14 28228 85 2 6 chr5 84748824 84752489 -118333043 + Harlequin LTR ERV1 339 3987 -4412 6128 93 13 6 chr5 84752486 84753327 -118332205 + Harlequin LTR ERV1 4108 4954 -3445 * 2515 161 108 74 chr5 84753320 84754172 -118331360 + Harlequin LTR ERV1 840 1720 -5176 * 5050 89 0 0 chr5 84754167 84754810 -118330722 + Harlequin LTR ERV1 7757 8399 0 4585 55 39 137 chr5 84754810 84755572 -118329960 + LTR12 LTR ERV1 1 688 0 2438 77 3 3 chr5 84755575 84755873 -118329659 + AluY SINE Alu 1 298 -13 2154 94 0 17 chr5 84755874 84756204 -118329328 + AluY SINE Alu 2 326 0 2700 247 51 22 chr5 84756214 84756459 -118329073 + L1M4 LINE L1 2111 2347 -3799 2093 103 7 0 chr5 84756459 84756731 -118328801 + AluSg SINE Alu 26 299 -11 2700 247 51 22 chr5 84756731 84757387 -118328145 + L1M4 LINE L1 2347 3038 -3108 2114 133 7 0 chr5 84757395 84757696 -118327836 + AluSx SINE Alu 1 303 -9 276 122 61 0 chr5 84757749 84757798 -118327734 + L1MD1 LINE L1 6182 6233 -9 1942 149 24 0 chr5 84758097 84758392 -118327140 + AluSx SINE Alu 1 302 -10 538 302 90 16 chr5 84758446 84758761 -118326771 - L1MC/D LINE L1 -355 5766 5437 1916 172 0 0 chr5 84758761 84759057 -118326475 - AluJb SINE Alu -14 298 3 538 302 90 16 chr5 84759057 84759083 -118326449 - L1MC/D LINE L1 -684 5437 5414 5760 162 25 2 chr5 84759087 84760064 -118325468 - L1MC1 LINE L1 -5 6328 5330 495 145 0 0 chr5 84760072 84760155 -118325377 + (TCCC)n Simple_repeat Simple_repeat 3 85 0 1649 180 33 16 chr5 84760157 84760463 -118325069 - AluJo SINE Alu -1 311 1 2335 93 3 3 chr5 84760467 84760769 -118324763 - AluSx SINE Alu -10 302 1 395 74 25 14 chr5 84760776 84760867 -118324665 - L1MC1 LINE L1 -822 5324 5230 250 179 170 19 chr5 84761788 84761894 -118323638 - L1ME LINE L1 -298 5823 5702 1737 123 0 49 chr5 84762272 84762596 -118322936 + AluSx SINE Alu 1 308 -4 1964 160 125 32 chr5 84762644 84763090 -118322442 + LTR48 LTR ERV1 1 624 -163 2285 85 7 7 chr5 84763090 84763412 -118322120 - AluY SINE Alu 0 311 1 1964 160 125 32 chr5 84763412 84763593 -118321939 + LTR48 LTR ERV1 624 787 0 797 225 106 42 chr5 84763625 84764029 -118321503 - L1MC5 LINE L1 -264 7697 7268 369 253 149 45 chr5 84764330 84764426 -118321106 + MER5A DNA MER1_type 20 139 -50 3668 140 55 10 chr5 84764426 84765042 -118320490 + LTR48B LTR ERV1 1 644 0 369 253 149 45 chr5 84765042 84765099 -118320433 + MER5A DNA MER1_type 139 189 0 1304 236 138 58 chr5 84765151 84765220 -118320312 - MLT1F LTR MaLR -1 541 479 2204 104 0 10 chr5 84765220 84765518 -118320014 + AluSx SINE Alu 1 295 -17 1304 236 138 58 chr5 84765518 84765948 -118319584 - MLT1F LTR MaLR -63 479 2 2036 152 0 0 chr5 84766276 84766578 -118318954 + AluSx SINE Alu 1 302 -10 221 307 88 44 chr5 84768424 84768538 -118316994 - MIR SINE MIR -62 146 28 1834 162 3 13 chr5 84769325 84769633 -118315899 - AluJo SINE Alu -7 305 1 1754 166 3 28 chr5 84771682 84772002 -118313530 - AluJb SINE Alu 0 312 1 899 161 0 36 chr5 84772008 84772176 -118313356 - MLT1A2 LTR MaLR -212 162 1 27 0 0 0 chr5 84772594 84772621 -118312911 + AT_rich Low_complexity Low_complexity 1 27 0 2162 118 0 7 chr5 84772946 84773243 -118312289 - AluSx SINE Alu -17 295 1 342 252 28 37 chr5 84774152 84774259 -118311273 - MIR SINE MIR -20 242 137 1758 124 92 3 chr5 84774312 84774627 -118310905 - L1MB4 LINE L1 -2 6178 5836 402 278 40 8 chr5 84774627 84774753 -118310779 - MIR SINE MIR -118 144 15 307 310 103 29 chr5 84774763 84774937 -118310595 + MER5A DNA MER1_type 2 188 -1 1741 133 28 115 chr5 84775052 84775452 -118310080 + MLT1A1 LTR MaLR 1 365 0 2200 98 0 33 chr5 84776359 84776666 -118308866 - AluSq SINE Alu -16 297 1 338 270 54 75 chr5 84776692 84777118 -118308414 + L1ME4a LINE L1 5705 6121 0 736 277 209 45 chr5 84777143 84777206 -118308326 + HAL1 LINE L1 11 62 -2445 369 0 0 0 chr5 84777206 84777247 -118308285 + (CA)n Simple_repeat Simple_repeat 2 42 0 736 277 209 45 chr5 84777247 84777743 -118307789 + HAL1 LINE L1 62 662 -1845 23 54 0 0 chr5 84777963 84778000 -118307532 + AT_rich Low_complexity Low_complexity 1 37 0 1963 158 10 0 chr5 84778063 84778360 -118307172 + AluJo SINE Alu 1 300 -12 224 321 0 0 chr5 84778377 84778458 -118307074 + CT-rich Low_complexity Low_complexity 2 82 0 1570 145 21 0 chr5 84778472 84778713 -118306819 + AluSg/x SINE Alu 65 310 0 2194 188 51 5 chr5 84778715 84779145 -118306387 - MER39B LTR ERV1 -203 450 1 997 243 44 7 chr5 84779145 84779417 -118306115 - L1M4 LINE L1 -963 5183 4902 2595 60 0 0 chr5 84779740 84780041 -118305491 - AluY SINE Alu -10 301 1 2291 105 7 0 chr5 84780107 84780402 -118305130 - AluSq SINE Alu -16 297 1 2441 81 3 0 chr5 84780467 84780763 -118304769 + AluSc SINE Alu 1 297 -12 2361 119 0 0 chr5 84780991 84781302 -118304230 - AluSx SINE Alu -1 311 1 1607 143 55 0 chr5 84781304 84781576 -118303956 - L1MC3 LINE L1 -145 7640 7354 242 0 0 0 chr5 84781599 84781625 -118303907 + MLT2B2 LTR ERVL 490 515 0 724 67 0 0 chr5 84781625 84781714 -118303818 - MSTA LTR MaLR -11 417 329 750 85 0 19 chr5 84781717 84781823 -118303709 - MER4C LTR ERV1 -361 104 1 2683 104 3 3 chr5 84781832 84782196 -118303336 + THE1B LTR MaLR 1 364 0 2076 163 42 39 chr5 84782196 84782602 -118302930 - L1MC3 LINE L1 -482 7303 6897 2079 124 13 3 chr5 84782703 84783001 -118302531 - AluSq SINE Alu -12 301 1 879 233 93 70 chr5 84783476 84783599 -118301933 - MLT1G LTR MaLR 0 590 471 703 46 0 0 chr5 84783599 84783686 -118301846 - L1PA4 LINE L1 0 6155 6069 879 233 93 70 chr5 84783686 84784076 -118301456 - MLT1G LTR MaLR -119 471 5 544 255 46 25 chr5 84784133 84784329 -118301203 + LTR33 LTR ERVL 314 513 -8 1012 164 47 19 chr5 84784454 84784668 -118300864 - MER96B DNA MER1_type? -195 222 3 4120 196 26 49 chr5 84785548 84786540 -118298992 + LTR5 LTR ERVK 1 969 0 22 0 0 0 chr5 84787343 84787365 -118298167 + AT_rich Low_complexity Low_complexity 1 22 0 4211 161 20 13 chr5 84788082 84788633 -118296899 + L1MB1 LINE L1 4615 5175 -1137 2010 135 0 0 chr5 84788633 84788940 -118296592 + AluSx SINE Alu 1 307 0 4211 161 20 13 chr5 84788940 84789391 -118296141 + L1MB1 LINE L1 5175 5621 -691 1908 70 0 29 chr5 84789423 84789695 -118295837 + L1PA13 LINE L1 5888 6151 -12 2237 93 0 16 chr5 84789700 84790012 -118295520 + AluY SINE Alu 1 307 -4 3454 134 20 5 chr5 84790019 84790579 -118294953 + L1MB1 LINE L1 5600 6167 -1 211 326 0 0 chr5 84791891 84791940 -118293592 + (CGTG)n Simple_repeat Simple_repeat 2 50 0 2227 68 39 4 chr5 84797058 84797337 -118288195 + AluY SINE Alu 8 296 -15 804 146 8 0 chr5 84797656 84797779 -118287753 + FLAM_C SINE Alu 1 124 -19 2327 86 0 0 chr5 84797991 84798281 -118287251 - AluSg1 SINE Alu -19 290 1 2183 131 3 0 chr5 84798475 84798780 -118286752 + AluSx SINE Alu 1 306 -6 37 86 0 0 chr5 84798838 84798931 -118286601 + AT_rich Low_complexity Low_complexity 1 93 0 704 252 154 48 chr5 84800558 84801144 -118284388 - L2 LINE L2 0 3313 2659 2318 104 0 13 chr5 84801356 84801664 -118283868 - AluSg SINE Alu -6 304 1 215 79 26 0 chr5 84802327 84802365 -118283167 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2230 101 0 0 chr5 84802369 84802645 -118282887 - AluSx SINE Alu -30 282 7 225 108 0 0 chr5 84802672 84802709 -118282823 + (TG)n Simple_repeat Simple_repeat 2 38 0 559 238 109 0 chr5 84802837 84802984 -118282548 - MER45A DNA AcHobo -15 163 1 839 140 0 22 chr5 84803094 84803230 -118282302 + FLAM_C SINE Alu 1 133 0 342 221 15 0 chr5 84805097 84805165 -118280367 - MER2 DNA MER2_type 0 345 277 1975 116 4 11 chr5 84805169 84805446 -118280086 + AluSx SINE Alu 1 275 -37 700 145 0 8 chr5 84805489 84805606 -118279926 + FLAM_C SINE Alu 24 139 -4 1199 106 9 93 chr5 84805628 84805854 -118279678 - MER2 DNA MER2_type -135 210 4 4444 101 17 6 chr5 84806399 84806620 -118278912 - MER51C LTR ERV1 -1 639 422 2381 76 3 0 chr5 84806620 84806910 -118278622 - AluSp SINE Alu -17 296 6 4444 101 17 6 chr5 84806910 84807320 -118278212 - MER51C LTR ERV1 -218 422 1 21 0 0 0 chr5 84807446 84807467 -118278065 + AT_rich Low_complexity Low_complexity 1 21 0 2002 164 3 0 chr5 84807558 84807868 -118277664 + AluSx SINE Alu 1 311 -1 278 135 157 11 chr5 84808184 84808273 -118277259 - MER20B DNA MER1_type -156 627 526 2360 99 0 0 chr5 84808300 84808594 -118276938 - AluSg SINE Alu -16 294 1 268 233 33 0 chr5 84808705 84808795 -118276737 - MER20B DNA MER1_type -466 317 225 316 242 92 17 chr5 84808834 84808954 -118276578 - MER20B DNA MER1_type -644 139 11 219 139 0 0 chr5 84809605 84809641 -118275891 + (CA)n Simple_repeat Simple_repeat 1 36 0 2238 113 13 3 chr5 84810534 84810843 -118274689 - AluSx SINE Alu 0 312 1 215 61 30 0 chr5 84811124 84811157 -118274375 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 473 206 135 14 chr5 84811746 84811887 -118273645 + MIR SINE MIR 3 160 -102 189 147 0 0 chr5 84812167 84812201 -118273331 + (CCCTAA)n Simple_repeat Simple_repeat 4 37 0 1462 180 47 43 chr5 84812638 84812815 -118272717 - AluJo SINE Alu -11 301 121 2262 96 10 0 chr5 84812815 84813107 -118272425 + AluSq SINE Alu 1 295 -18 1462 180 47 43 chr5 84813107 84813229 -118272303 - AluJo SINE Alu -191 121 1 1017 255 107 26 chr5 84813435 84813745 -118271787 + MLT1J2 LTR MaLR 70 404 -46 2054 107 3 52 chr5 84814407 84814580 -118270952 - AluSx SINE Alu -17 295 115 237 33 0 0 chr5 84814580 84814610 -118270922 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1961 109 0 79 chr5 84814610 84814914 -118270618 - AluSx SINE Alu -32 280 1 2054 107 3 52 chr5 84814914 84815049 -118270483 - AluSx SINE Alu -195 117 1 2385 101 0 3 chr5 84816118 84816424 -118269108 + AluSx SINE Alu 1 305 -7 239 143 54 0 chr5 84816428 84816484 -118269048 - L1MCa LINE L1 -4362 2064 2006 * 291 255 0 43 chr5 84816455 84816549 -118268983 - L1MC4 LINE L1 -1339 6983 6894 280 208 0 62 chr5 84816467 84816563 -118268969 + L1MC4 LINE L1 6614 6703 -1339 * 320 306 76 10 chr5 84817072 84817220 -118268312 + MIR SINE MIR 5 162 -71 9420 104 37 13 chr5 84817874 84819269 -118266263 + Tigger1 DNA MER2_type 1 1428 -990 2940 123 17 38 chr5 84819269 84819742 -118265790 + Tigger1 DNA MER2_type 1769 2231 -187 783 219 5 78 chr5 84819758 84819950 -118265582 - AluJb SINE Alu -1 311 134 2210 101 7 0 chr5 84819958 84820246 -118265286 - AluSc SINE Alu -19 290 1 1258 141 15 0 chr5 84820246 84820444 -118265088 + Tigger1 DNA MER2_type 2218 2418 0 321 271 118 97 chr5 84820496 84820567 -118264965 - MIR SINE MIR -114 148 80 2808 6 0 13 chr5 84820567 84820879 -118264653 + AluY SINE Alu 1 308 -3 321 271 118 97 chr5 84820879 84820951 -118264581 - MIR SINE MIR -182 80 2 1137 163 15 5 chr5 84821165 84821367 -118264165 + MLT2D LTR ERVL 21 224 -190 256 94 4 0 chr5 84821366 84821406 -118264126 + MLT2C1 LTR ERVL 354 411 -3 * 1910 141 10 10 chr5 84822717 84823007 -118262525 + AluJb SINE Alu 1 290 -22 668 222 28 11 chr5 84823014 84823190 -118262342 - MIR SINE MIR -6 256 78 387 0 0 0 chr5 84823416 84823459 -118262073 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 2053 57 0 16 chr5 84823459 84823707 -118261825 - AluY SINE Alu -32 279 36 2143 110 7 0 chr5 84823855 84824147 -118261385 - AluSq SINE Alu -19 294 1 10721 25 16 115 chr5 84824461 84825994 -118259538 - SVA Other Other -1 1385 4 2158 137 0 0 chr5 84826112 84826412 -118259120 - AluSx SINE Alu -12 300 1 246 277 15 0 chr5 84826420 84826485 -118259047 - MER5A DNA MER1_type 0 189 124 256 75 0 0 chr5 84826646 84826686 -118258846 - L1MA3 LINE L1 -5 6300 6261 333 217 0 0 chr5 84826686 84826746 -118258786 - MER5A DNA MER1_type -114 75 16 1853 221 61 20 chr5 84827618 84828062 -118257470 + MLT1C LTR MaLR 6 467 0 225 0 0 0 chr5 84828582 84828607 -118256925 + (CA)n Simple_repeat Simple_repeat 2 26 0 2403 73 3 10 chr5 84828919 84829232 -118256300 + AluY SINE Alu 1 311 0 201 170 19 38 chr5 84829294 84829347 -118256185 + A-rich Low_complexity Low_complexity 4 55 0 243 211 19 0 chr5 84829746 84829798 -118255734 - MLT2B2 LTR ERVL -2 513 461 262 143 0 171 chr5 84829828 84829898 -118255634 - MLT2B1 LTR ERVL -262 258 201 1229 124 0 0 chr5 84829898 84830067 -118255465 - AluSg/x SINE Alu -12 300 132 1046 143 87 41 chr5 84830067 84830263 -118255269 - MLT2B1 LTR ERVL -315 205 1 2194 110 0 0 chr5 84830358 84830664 -118254868 - AluSg SINE Alu 0 306 1 624 270 102 15 chr5 84830816 84831340 -118254192 + MLT2F LTR ERVL 1 649 -14 496 263 7 32 chr5 84831378 84831525 -118254007 - MLT1H1 LTR MaLR 0 555 400 422 213 67 67 chr5 84831629 84831779 -118253753 - MLT1F1 LTR MaLR -23 544 395 204 40 0 0 chr5 84831818 84831843 -118253689 + (TC)n Simple_repeat Simple_repeat 2 26 0 2369 99 0 0 chr5 84831843 84832145 -118253387 - AluSx SINE Alu -10 302 1 421 244 0 67 chr5 84832176 84832295 -118253237 - MLT1F1 LTR MaLR -302 288 178 329 252 137 38 chr5 84832316 84832447 -118253085 - HAL1 LINE L1 -1487 1020 877 307 265 56 22 chr5 84832457 84832666 -118252866 - L1M LINE L1 -806 5340 5215 1623 92 46 0 chr5 84832751 84832969 -118252563 + MER30 DNA MER1_type 3 230 0 390 265 26 15 chr5 84833104 84833221 -118252311 - MER5B DNA MER1_type -1 177 71 2149 147 0 3 chr5 84833271 84833584 -118251948 + AluJb SINE Alu 1 312 0 2355 100 0 0 chr5 84833676 84833975 -118251557 - AluSc SINE Alu -10 299 1 184 222 322 22 chr5 84834199 84834289 -118251243 + MER5A DNA MER1_type 67 183 -6 228 228 70 0 chr5 84834310 84834367 -118251165 + L2 LINE L2 3184 3244 -69 2445 84 3 0 chr5 84834770 84835069 -118250463 + AluSg SINE Alu 1 300 -10 572 235 0 17 chr5 84835377 84835522 -118250010 - FLAM_C SINE Alu 0 143 1 28 0 0 0 chr5 84835587 84835615 -118249917 + AT_rich Low_complexity Low_complexity 1 28 0 2362 96 7 0 chr5 84836517 84836820 -118248712 + AluSq SINE Alu 1 305 -8 195 176 0 0 chr5 84836858 84836892 -118248640 + MER5B DNA MER1_type 1 34 -144 410 252 112 28 chr5 84836940 84837083 -118248449 - MIR SINE MIR -106 156 2 229 338 0 0 chr5 84837472 84837549 -118247983 + MIR3 SINE MIR 110 186 -22 339 223 170 18 chr5 84837869 84837981 -118247551 - L2 LINE L2 -5 3308 3180 4016 105 2 11 chr5 84838274 84838827 -118246705 + L1PA16 LINE L1 5619 6166 0 2347 86 20 0 chr5 84839948 84840251 -118245281 - AluSx SINE Alu -3 309 1 329 294 28 9 chr5 84840435 84840544 -118244988 - MER5A DNA MER1_type -29 160 50 1997 111 39 0 chr5 84840624 84840904 -118244628 + AluSx SINE Alu 1 291 -21 231 114 0 0 chr5 84840913 84840948 -118244584 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 1068 137 91 17 chr5 84840949 84841124 -118244408 - MER5A DNA MER1_type -1 188 1 517 295 91 29 chr5 84841657 84842142 -118243390 - L1MC/D LINE L1 -804 5342 4937 1864 189 3 0 chr5 84842142 84842449 -118243083 - AluJb SINE Alu -4 308 1 517 295 91 29 chr5 84842449 84842572 -118242960 - L1MC/D LINE L1 -1209 4937 4823 1516 90 0 73 chr5 84842656 84842889 -118242643 + AluSg/x SINE Alu 80 295 -15 1020 98 0 0 chr5 84843936 84844068 -118241464 - FLAM_C SINE Alu -11 132 1 414 197 24 8 chr5 84844386 84844513 -118241019 + (CATATA)n Simple_repeat Simple_repeat 6 134 0 2006 179 51 102 chr5 84845635 84846101 -118239431 + MLT1D LTR MaLR 2 439 -66 682 57 11 0 chr5 84846101 84846189 -118239343 - L1PA5 LINE L1 -4 6150 6062 2006 179 51 102 chr5 84846189 84846253 -118239279 + MLT1D LTR MaLR 439 505 0 28 29 0 0 chr5 84846669 84846704 -118238828 + AT_rich Low_complexity Low_complexity 1 35 0 253 218 91 55 chr5 84848286 84848396 -118237136 + L2 LINE L2 3190 3303 -10 1711 97 24 247 chr5 84848482 84848811 -118236721 + THE1B LTR MaLR 3 199 -165 2016 85 58 0 chr5 84848811 84849070 -118236462 + AluSc SINE Alu 21 294 -15 1711 97 24 247 chr5 84849070 84849206 -118236326 + THE1B LTR MaLR 199 364 0 501 151 32 21 chr5 84850899 84850992 -118234540 + MIR SINE MIR 48 141 -121 1018 209 10 81 chr5 84851016 84851313 -118234219 - L1MD2 LINE L1 -10 6349 6074 1956 202 60 53 chr5 84851511 84851980 -118233552 + MER74B LTR ERVL 55 530 -92 1584 167 19 42 chr5 84851980 84852291 -118233241 - AluJo SINE Alu -4 308 5 1956 202 60 53 chr5 84852291 84852385 -118233147 + MER74B LTR ERVL 530 622 0 455 310 65 7 chr5 84853205 84853360 -118232172 - MER5B DNA MER1_type -6 172 9 1029 241 120 17 chr5 84853542 84853899 -118231633 - L1MC5 LINE L1 -601 7360 6967 1880 165 0 35 chr5 84854097 84854412 -118231120 + AluJo SINE Alu 1 304 -8 21 0 0 0 chr5 84854513 84854534 -118230998 + AT_rich Low_complexity Low_complexity 1 21 0 1131 206 0 0 chr5 84854988 84855202 -118230330 + AluJb SINE Alu 89 302 -10 2258 161 63 52 chr5 84855234 84855695 -118229837 + MER31B LTR ERV1 1 466 0 998 219 64 5 chr5 84857025 84857167 -118228365 + MIR SINE MIR 1 162 -100 285 29 0 0 chr5 84857167 84857201 -118228331 + (ATG)n Simple_repeat Simple_repeat 2 35 0 998 219 64 5 chr5 84857201 84857277 -118228255 + MIR SINE MIR 162 232 -30 195 136 250 0 chr5 84857249 84857293 -118228239 + L2 LINE L2 3250 3304 -9 * 532 223 0 33 chr5 84857346 84857514 -118228018 - MIR SINE MIR 0 262 57 28 0 0 0 chr5 84858043 84858071 -118227461 + AT_rich Low_complexity Low_complexity 1 28 0 453 116 0 0 chr5 84858861 84858930 -118226602 + (CA)n Simple_repeat Simple_repeat 2 70 0 1393 196 52 11 chr5 84858938 84859209 -118226323 - AluJb SINE Alu -30 282 1 218 191 60 60 chr5 84859229 84859397 -118226135 + (TTATA)n Simple_repeat Simple_repeat 1 168 0 384 285 58 66 chr5 84859868 84860005 -118225527 + L2 LINE L2 3136 3271 -1 368 284 10 10 chr5 84860147 84860249 -118225283 + MER117 DNA MER1_type 15 116 -81 22 0 0 0 chr5 84860559 84860581 -118224951 + AT_rich Low_complexity Low_complexity 1 22 0 2284 99 3 0 chr5 84860874 84861177 -118224355 - AluSc SINE Alu -5 304 1 270 0 0 0 chr5 84861178 84861208 -118224324 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2111 100 21 0 chr5 84861208 84861487 -118224045 - AluSp SINE Alu -28 285 1 1193 186 47 89 chr5 84861563 84861924 -118223608 - MER7A DNA MER2_type -2 344 1 369 313 37 15 chr5 84862398 84862532 -118223000 - MLT1J LTR MaLR -151 360 224 1219 121 19 37 chr5 84862567 84862879 -118222653 + THE1B LTR MaLR 1 364 0 526 246 54 25 chr5 84862893 84863092 -118222440 - MLT1J LTR MaLR -332 179 1 255 217 169 0 chr5 84863619 84863702 -118221830 + MER5C DNA MER1_type 228 324 0 680 303 102 26 chr5 84864333 84864831 -118220701 - MLT1H LTR MaLR -1 548 13 2116 172 64 14 chr5 84864839 84865274 -118220258 + MLT2B1 LTR ERVL 1 457 -63 2150 113 3 0 chr5 84865281 84865587 -118219945 + AluSx SINE Alu 1 307 0 574 153 30 46 chr5 84865636 84865767 -118219765 + Charlie8 DNA MER1_type 92 220 -2197 686 275 43 4 chr5 84866208 84866488 -118219044 + L1MC/D LINE L1 4552 4842 -1304 435 289 79 54 chr5 84866583 84866860 -118218672 + L1MC/D LINE L1 4996 5279 -867 230 248 37 89 chr5 84866873 84867087 -118218445 + L1MC/D LINE L1 5315 5517 -2291 319 232 13 90 chr5 84867192 84867347 -118218185 + MLT1J LTR MaLR 1 143 -368 356 226 39 94 chr5 84867402 84867583 -118217949 + MLT1J LTR MaLR 291 461 -50 2262 204 96 8 chr5 84868217 84868727 -118216805 - MER74A LTR ERVL 0 558 4 191 260 90 20 chr5 84868782 84868882 -118216650 - L2 LINE L2 -16 3256 3150 317 82 0 20 chr5 84869164 84869213 -118216319 + LTR59 LTR ERV1 1 48 -549 * 2987 133 0 4 chr5 84869210 84869677 -118215855 - LOR1a LTR ERV1 -32 465 1 2873 132 14 0 chr5 84869678 84870124 -118215408 + MER72 LTR ERV1 271 722 0 201 129 0 0 chr5 84870804 84870835 -118214697 + (CCG)n Simple_repeat Simple_repeat 2 32 0 245 242 253 0 chr5 84871324 84871415 -118214117 + MIR SINE MIR 38 151 -111 2022 97 7 45 chr5 84871636 84871946 -118213586 + AluSg SINE Alu 1 298 -12 252 0 0 0 chr5 84872277 84872305 -118213227 + (A)n Simple_repeat Simple_repeat 1 28 0 2480 44 17 7 chr5 84872316 84872612 -118212920 + AluY SINE Alu 1 299 -12 278 315 89 0 chr5 84873318 84873464 -118212068 + MIR SINE MIR 89 247 -15 459 241 108 6 chr5 84873492 84873650 -118211882 - MER96 DNA MER1_type? 0 175 2 234 218 144 81 chr5 84876051 84876336 -118209196 - L1MC5 LINE L1 -274 7687 7385 1530 136 17 4 chr5 84876759 84876995 -118208537 - AluSg/x SINE Alu -9 303 65 1618 185 20 7 chr5 84877520 84877818 -118207714 + AluJb SINE Alu 1 302 -10 30 0 0 0 chr5 84878471 84878501 -118207031 + AT_rich Low_complexity Low_complexity 1 30 0 339 210 0 12 chr5 84879245 84879326 -118206206 - MER116 DNA Mariner 0 80 1 2302 87 3 7 chr5 84880131 84880431 -118205101 - AluSp SINE Alu -14 299 1 26 0 0 0 chr5 84880434 84880460 -118205072 + AT_rich Low_complexity Low_complexity 1 26 0 441 73 49 12 chr5 84880813 84880895 -118204637 + (TCCTG)n Simple_repeat Simple_repeat 1 85 0 953 174 12 0 chr5 84880895 84881056 -118204476 - AluJb SINE Alu -21 291 129 2373 104 0 0 chr5 84881306 84881614 -118203918 + AluSx SINE Alu 1 308 -4 210 37 0 0 chr5 84881803 84881830 -118203702 + (T)n Simple_repeat Simple_repeat 1 27 0 6126 29 3 6 chr5 84881831 84882529 -118203003 - SVA Other Other 0 1386 691 495 353 75 36 chr5 84882796 84883357 -118202175 + HERV16 LTR ERVL 2902 3484 -2280 451 194 139 72 chr5 84883446 84883626 -118201906 + HERV16 LTR ERVL 3238 3429 -1567 360 319 65 32 chr5 84883832 84884048 -118201484 + HERV16 LTR ERVL 4018 4240 -1524 27 29 0 0 chr5 84884323 84884357 -118201175 + AT_rich Low_complexity Low_complexity 1 34 0 636 94 42 0 chr5 84887210 84887306 -118198226 - LTR12 LTR ERV1 0 714 615 331 255 10 0 chr5 84887309 84887407 -118198125 - LTR30 LTR ERV1 -80 642 544 1332 80 125 0 chr5 84887407 84887607 -118197925 - LTR12 LTR ERV1 -437 277 53 254 211 0 0 chr5 84887607 84887659 -118197873 - LTR30 LTR ERV1 -670 52 1 309 229 125 52 chr5 84888072 84888235 -118197297 + L1MC/D LINE L1 5294 5459 -885 421 251 80 0 chr5 84888236 84888423 -118197109 - HAL1b LINE L1 -257 1091 890 475 244 108 67 chr5 84888443 84888759 -118196773 - HAL1b LINE L1 -574 774 446 241 293 50 0 chr5 84888798 84888897 -118196635 - HAL1b LINE L1 -965 383 280 2775 10 0 0 chr5 84890173 84890480 -118195052 + AluYa5 SINE Alu 1 307 -4 1809 160 81 24 chr5 84890744 84891269 -118194263 + MLT2A2 LTR ERVL 1 554 0 1201 208 12 108 chr5 84891316 84891725 -118193807 + MLT1A2 LTR MaLR 1 370 -4 686 259 84 63 chr5 84891759 84892106 -118193426 + MER20B DNA MER1_type 1 354 -429 180 0 0 0 chr5 84894951 84894971 -118190561 + (CGGGGG)n Simple_repeat Simple_repeat 1 20 0 322 319 103 44 chr5 84895091 84895295 -118190237 + L1M2 LINE L1 709 924 -5925 666 156 74 25 chr5 84895671 84895793 -118189739 - AluJb SINE Alu -49 263 136 241 257 55 18 chr5 84896151 84896260 -118189272 + L1ME3 LINE L1 5314 5426 -2382 1328 250 42 51 chr5 84896369 84896464 -118189068 + L1ME3 LINE L1 5304 5398 -764 2457 85 0 0 chr5 84896464 84896759 -118188773 + AluY SINE Alu 1 295 -16 1328 250 42 51 chr5 84896759 84897251 -118188281 + L1ME3 LINE L1 5398 5886 -276 2253 110 0 0 chr5 84897383 84897674 -118187858 + AluJb SINE Alu 1 291 -21 3250 83 34 79 chr5 84898174 84898742 -118186790 - SVA Other Other -518 868 327 1954 89 0 8 chr5 84899273 84899530 -118186002 + AluSg SINE Alu 49 303 -7 1008 160 47 0 chr5 84899692 84899904 -118185628 + L1MA8 LINE L1 6066 6287 -4 686 161 112 7 chr5 84900206 84900349 -118185183 + MER33 DNA MER1_type 1 158 -166 371 177 13 0 chr5 84900345 84900424 -118185108 + MER33 DNA MER1_type 284 363 0 * 349 317 148 17 chr5 84900428 84900658 -118184874 - L2 LINE L2 -688 2626 2367 1851 161 33 6 chr5 84901578 84901913 -118183619 - MER2 DNA MER2_type 0 344 1 2128 116 0 14 chr5 84901966 84902260 -118183272 - AluSx SINE Alu -22 290 1 27 29 0 0 chr5 84902286 84902320 -118183212 + AT_rich Low_complexity Low_complexity 1 34 0 256 287 47 60 chr5 84902745 84902784 -118182748 - L2 LINE L2 -1 3312 3274 2047 106 18 11 chr5 84902784 84903092 -118182440 - AluSx SINE Alu 0 310 1 256 287 47 60 chr5 84903092 84903201 -118182331 - L2 LINE L2 -39 3274 3165 21 0 0 0 chr5 84903468 84903489 -118182043 + AT_rich Low_complexity Low_complexity 1 21 0 1922 147 16 16 chr5 84903984 84904291 -118181241 - AluJb SINE Alu -5 307 1 201 322 16 91 chr5 84905399 84905520 -118180012 + L2 LINE L2 3171 3282 -31 2181 105 7 7 chr5 84905530 84905826 -118179706 + AluSx SINE Alu 1 296 -16 29 0 0 0 chr5 84906152 84906181 -118179351 + AT_rich Low_complexity Low_complexity 1 29 0 787 121 52 35 chr5 84906841 84907014 -118178518 + L1MA8 LINE L1 6110 6285 -6 23 68 0 0 chr5 84907713 84907757 -118177775 + AT_rich Low_complexity Low_complexity 1 44 0 545 300 202 25 chr5 84908004 84908826 -118176706 - L2 LINE L2 -24 3289 2319 228 280 10 40 chr5 84909193 84909293 -118176239 - L1MC/D LINE L1 -1968 5840 5744 303 298 149 54 chr5 84909388 84909703 -118175829 + MLT1L LTR MaLR 118 462 -153 1776 142 3 50 chr5 84910077 84910380 -118175152 + AluSx SINE Alu 1 289 -23 2654 218 51 28 chr5 84910394 84910593 -118174939 + L1ME1 LINE L1 4698 4891 -1275 2157 123 3 0 chr5 84910593 84910895 -118174637 - AluSx SINE Alu -9 303 1 2654 218 51 28 chr5 84910895 84911864 -118173668 + L1ME1 LINE L1 4891 5892 -274 2290 190 16 5 chr5 84911884 84912316 -118173216 - MER70A LTR ERVL 0 472 36 614 203 46 0 chr5 84912440 84912593 -118172939 + L1MA10 LINE L1 6168 6327 -7 666 183 0 8 chr5 84912940 84913060 -118172472 - L2 LINE L2 0 3313 3195 2033 154 27 0 chr5 84913459 84913797 -118171735 - MER7A DNA MER2_type 0 346 2 1668 174 3 10 chr5 84913992 84914296 -118171236 - AluJo SINE Alu -10 302 1 924 265 107 17 chr5 84914784 84915139 -118170393 + MARNA DNA Mariner 183 569 -17 288 257 86 0 chr5 84915400 84915470 -118170062 + MIR3 SINE MIR 87 162 -46 324 269 39 29 chr5 84915591 84915695 -118169837 - L1ME4a LINE L1 -4 6117 6013 464 286 82 12 chr5 84916971 84917142 -118168390 + MIR SINE MIR 73 255 -7 646 282 95 21 chr5 84917246 84917487 -118168045 + MIR SINE MIR 2 260 -2 535 293 128 30 chr5 84917706 84918204 -118167328 + L1MC4 LINE L1 7496 8042 0 195 356 69 0 chr5 84918313 84918400 -118167132 - L2 LINE L2 -1354 1960 1868 890 85 8 0 chr5 84918437 84918566 -118166966 + (TA)n Simple_repeat Simple_repeat 1 130 0 29 47 0 0 chr5 84919997 84920040 -118165492 + GC_rich Low_complexity Low_complexity 1 43 0 2160 57 18 4 chr5 84923163 84923442 -118162090 + L1PA6 LINE L1 5872 6154 0 479 312 75 10 chr5 84923514 84923822 -118161710 + L1MC4a LINE L1 5265 5592 -2403 1944 106 13 30 chr5 84923826 84924129 -118161403 - AluJb SINE Alu 0 312 15 303 338 84 7 chr5 84924291 84924445 -118161087 - L2 LINE L2 -6 3266 3101 2121 117 0 0 chr5 84924478 84924778 -118160754 + AluSq SINE Alu 1 300 -13 380 278 66 60 chr5 84924789 84925166 -118160366 + L1MC4a LINE L1 5629 5987 -134 25 0 0 0 chr5 84925312 84925337 -118160195 + AT_rich Low_complexity Low_complexity 1 25 0 2313 87 0 6 chr5 84925346 84925658 -118159874 + AluSq SINE Alu 1 310 -3 180 313 21 0 chr5 84925971 84926019 -118159513 + MIR SINE MIR 117 165 -97 287 331 96 0 chr5 84926571 84926707 -118158825 - L2 LINE L2 -6 3266 3118 2102 142 16 30 chr5 84926720 84927087 -118158445 + THE1B LTR MaLR 1 362 -2 25 0 0 0 chr5 84928743 84928768 -118156764 + AT_rich Low_complexity Low_complexity 1 25 0 282 194 129 0 chr5 84930096 84930158 -118155374 - MLT1I LTR MaLR -16 393 324 475 191 118 9 chr5 84930253 84930363 -118155169 + MER63 DNA MER1_type 4 751 -311 269 213 0 0 chr5 84930364 84930411 -118155121 + MER63 DNA MER1_type 979 1025 -37 4244 146 36 58 chr5 84930603 84931424 -118154108 - LTR1B LTR ERV1 -23 803 1 483 224 20 0 chr5 84931544 84931642 -118153890 + Charlie3 DNA MER1_type 1 100 -2610 348 221 100 50 chr5 84982162 84982302 -118103230 - LTR33 LTR ERVL -70 451 305 624 242 18 24 chr5 84982330 84982495 -118103037 - LTR33 LTR ERVL -357 164 1 430 293 0 8 chr5 84982694 84982817 -118102715 + L2 LINE L2 3186 3307 -6 224 301 237 0 chr5 84983121 84983214 -118102318 - L2 LINE L2 0 3313 3199 181 376 43 0 chr5 84984637 84984754 -118100778 + L2 LINE L2 2215 2336 -978 181 239 22 0 chr5 84984958 84985004 -118100528 + L2 LINE L2 3110 3156 -116 1670 289 53 30 chr5 84985971 84986670 -118098862 + L2 LINE L2 2041 2755 -559 1016 262 81 44 chr5 84986666 84987097 -118098435 + L2 LINE L2 2867 3313 0 * 255 215 0 0 chr5 84987150 84987215 -118098317 + (TA)n Simple_repeat Simple_repeat 2 66 0 228 216 32 24 chr5 84988288 84988413 -118097119 + CT-rich Low_complexity Low_complexity 5 130 0 2733 204 69 54 chr5 84988581 84989303 -118096229 - MER44D DNA MER2_type 0 605 1 2068 225 144 23 chr5 84989919 84990448 -118095084 - MLT1E LTR MaLR 0 593 1 481 143 71 0 chr5 84991070 84991168 -118094364 - FLAM_C SINE Alu -36 107 3 312 91 0 0 chr5 84991535 84991579 -118093953 + (TG)n Simple_repeat Simple_repeat 2 45 0 362 100 17 0 chr5 84991633 84991693 -118093839 + (CCCCCA)n Simple_repeat Simple_repeat 4 64 0 301 363 9 0 chr5 84992603 84992716 -118092816 + MIR SINE MIR 16 129 -79 403 253 135 56 chr5 84993576 84993678 -118091854 - MIR SINE MIR -1 261 168 2149 114 0 0 chr5 84993678 84993990 -118091542 - AluSg SINE Alu 0 314 3 403 253 135 56 chr5 84993990 84994083 -118091449 - MIR SINE MIR -94 168 49 344 295 43 84 chr5 84994226 84994544 -118090988 - L1MC4a LINE L1 -331 5790 5607 1665 163 14 20 chr5 84994544 84994839 -118090693 - AluJb SINE Alu -19 293 1 344 295 43 84 chr5 84994839 84994879 -118090653 - L1MC4a LINE L1 -514 5607 5567 237 319 42 25 chr5 84994909 84995028 -118090504 + MIR3 SINE MIR 62 182 -26 287 235 15 0 chr5 84995065 84995133 -118090399 + MER116 DNA Mariner 12 80 0 313 132 0 19 chr5 84995205 84995258 -118090274 - MLT1I LTR MaLR -16 393 342 845 156 7 44 chr5 84995268 84995403 -118090129 + FLAM_C SINE Alu 1 130 -3 26 0 0 0 chr5 84995403 84995429 -118090103 + AT_rich Low_complexity Low_complexity 1 26 0 531 276 34 92 chr5 84995435 84995761 -118089771 - MLT1I LTR MaLR -63 346 40 2444 143 21 10 chr5 84995781 84996167 -118089365 - MLT1B LTR MaLR 0 390 1 615 217 288 0 chr5 84996451 84996649 -118088883 + MIR SINE MIR 8 262 0 2207 229 68 35 chr5 84997566 84998199 -118087333 + HsTC2c DNA Tc2 76 729 0 226 277 0 46 chr5 84998203 84998268 -118087264 - MIR3 SINE MIR -133 75 14 204 203 0 51 chr5 84999202 84999261 -118086271 + GA-rich Low_complexity Low_complexity 4 59 0 204 203 0 51 chr5 85000291 85000350 -118085182 + GA-rich Low_complexity Low_complexity 4 59 0 232 213 0 0 chr5 85000880 85000927 -118084605 - L2 LINE L2 -2 3311 3265 223 137 20 20 chr5 85000975 85001026 -118084506 + GA-rich Low_complexity Low_complexity 5 55 0 1133 280 121 21 chr5 85001037 85001683 -118083849 - L2 LINE L2 -165 3148 2450 210 233 0 0 chr5 85001658 85001701 -118083831 + MIR3 SINE MIR 147 189 -19 * 1824 198 36 33 chr5 85002548 85002937 -118082595 - MLT1B LTR MaLR 0 390 1 2578 44 0 3 chr5 85003008 85003303 -118082229 - AluY SINE Alu -17 294 1 4059 118 2 2 chr5 85003323 85003849 -118081683 - MER1A DNA MER1_type 0 527 2 5281 209 55 35 chr5 85003849 85006074 -118079458 - L1ME2 LINE L1 -44 6120 3839 4496 162 25 64 chr5 85006068 85006686 -118078846 - L1MB5 LINE L1 0 6174 5534 * 1219 201 167 45 chr5 85006686 85007039 -118078493 - MSTD LTR MaLR 0 396 1 4496 162 25 64 chr5 85007039 85007187 -118078345 - L1MB5 LINE L1 -640 5534 5382 2694 144 21 28 chr5 85007187 85007624 -118077908 - Tigger2a DNA MER2_type 0 434 1 4496 162 25 64 chr5 85007624 85008143 -118077389 - L1MB5 LINE L1 -792 5382 4932 1980 258 53 24 chr5 85008135 85008761 -118076771 - L1ME2 LINE L1 -2292 3854 3198 * 2038 130 3 16 chr5 85008761 85009068 -118076464 - AluSx SINE Alu -9 303 1 1980 258 53 24 chr5 85009068 85009259 -118076273 - L1ME2 LINE L1 -2948 3198 3014 * 2097 258 79 28 chr5 85009257 85010394 -118075138 - L1MEc LINE L1 -2839 3376 59 183 45 0 91 chr5 85012219 85012263 -118073269 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 480 202 12 12 chr5 85012286 85012370 -118073162 + MER5A DNA MER1_type 2 85 -104 292 306 130 0 chr5 85013000 85013108 -118072424 - L2 LINE L2 -2 3311 3190 1804 146 69 56 chr5 85013448 85013825 -118071707 - MLT1B LTR MaLR -8 382 1 2863 137 5 31 chr5 85013937 85014286 -118071246 + Tigger2a DNA MER2_type 1 337 -2371 1642 122 126 0 chr5 85014286 85014549 -118070983 - AluSx SINE Alu -16 296 1 2863 137 5 31 chr5 85014549 85014645 -118070887 + Tigger2a DNA MER2_type 337 434 0 394 264 153 67 chr5 85014807 85015121 -118070411 + L2 LINE L2 2885 3225 -47 206 121 0 0 chr5 85015151 85015184 -118070348 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 366 327 119 0 chr5 85015368 85015469 -118070063 + L2 LINE L2 3160 3272 0 180 0 0 0 chr5 85015700 85015720 -118069812 + (T)n Simple_repeat Simple_repeat 1 20 0 2242 107 3 7 chr5 85015777 85016076 -118069456 + AluSx SINE Alu 1 298 -14 185 330 31 10 chr5 85016284 85016381 -118069151 + L2 LINE L2 2874 2972 -342 1158 254 80 64 chr5 85017617 85018146 -118067386 - L2 LINE L2 0 3313 2773 25 0 0 0 chr5 85018326 85018351 -118067181 + AT_rich Low_complexity Low_complexity 1 25 0 420 285 49 8 chr5 85018411 85018534 -118066998 - MIR SINE MIR -133 129 2 199 200 0 0 chr5 85018755 85018790 -118066742 - L3 LINE CR1 -3 1574 1540 1300 198 78 85 chr5 85020139 85020549 -118064983 + LTR16A LTR ERVL 39 445 -5 228 37 0 0 chr5 85023317 85023344 -118062188 - L2 LINE L2 -20 3293 3267 1225 144 27 21 chr5 85025481 85025669 -118059863 - MER5A DNA MER1_type 0 189 1 935 263 143 36 chr5 85026830 85027015 -118058517 - LTR33 LTR ERVL -3 518 354 2424 118 36 17 chr5 85027015 85027372 -118058160 - THE1B LTR MaLR 0 364 1 935 263 143 36 chr5 85027372 85027654 -118057878 - LTR33 LTR ERVL -167 354 1 1934 132 10 7 chr5 85028296 85028591 -118056941 - AluJb SINE Alu -16 296 1 246 296 30 76 chr5 85029031 85029163 -118056369 - MIR SINE MIR -48 214 89 180 306 0 0 chr5 85029491 85029540 -118055992 + MIR SINE MIR 208 256 -6 333 263 21 0 chr5 85031614 85031709 -118053823 - MIR SINE MIR -102 160 64 1406 208 84 85 chr5 85031800 85032582 -118052950 - L1MC5 LINE L1 -215 7746 6880 256 317 1 1 chr5 85032870 85032944 -118052588 + MIR SINE MIR 46 118 -94 1648 112 0 0 chr5 85033097 85033311 -118052221 + AluSg SINE Alu 1 214 -96 239 125 0 25 chr5 85033311 85033351 -118052181 + AluSg SINE Alu 253 291 -9 1065 180 35 103 chr5 85033781 85033992 -118051540 - MER33 DNA MER1_type -2261 324 143 1452 31 0 0 chr5 85033992 85034151 -118051381 - L1PA3 LINE L1 -3 6152 5994 1065 180 35 103 chr5 85034151 85034278 -118051254 - MER33 DNA MER1_type -2442 143 9 245 364 30 0 chr5 85034455 85034554 -118050978 + LTR33A LTR ERVL 59 160 -363 294 276 83 58 chr5 85034902 85035058 -118050474 + MIR SINE MIR 103 262 0 4763 233 69 44 chr5 85035101 85036605 -118048927 - L1MC5 LINE L1 -35 7926 6329 311 44 22 0 chr5 85036605 85036650 -118048882 + (CA)n Simple_repeat Simple_repeat 1 46 0 4763 233 69 44 chr5 85036650 85037325 -118048207 - L1MC5 LINE L1 -1632 6329 5673 318 183 12 73 chr5 85038153 85038235 -118047297 + L1MC4a LINE L1 6701 6777 -1031 257 344 57 25 chr5 85038517 85038639 -118046893 - L2 LINE L2 -5 3267 3142 1596 217 111 31 chr5 85038661 85039132 -118046400 - MLT1E LTR MaLR -6 587 7 292 269 41 102 chr5 85039182 85039379 -118046153 - L2 LINE L2 -177 3095 2911 3885 184 21 7 chr5 85040190 85040942 -118044590 - L1MB7 LINE L1 -19 6165 5403 201 231 8 146 chr5 85041160 85041223 -118044309 + MER5B DNA MER1_type 67 104 -74 1633 155 79 0 chr5 85041223 85041501 -118044031 - AluSx SINE Alu -12 300 1 201 231 8 146 chr5 85041501 85041567 -118043965 + MER5B DNA MER1_type 104 178 0 416 292 53 6 chr5 85042379 85042550 -118042982 - LTR33 LTR ERVL 0 521 343 559 265 88 0 chr5 85042616 85042797 -118042735 - LTR33 LTR ERVL -304 217 21 414 0 0 0 chr5 85044411 85044457 -118041075 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 85044555 85044576 -118040956 + AT_rich Low_complexity Low_complexity 1 21 0 237 217 0 0 chr5 85044687 85044733 -118040799 - L2 LINE L2 -5 3267 3222 355 306 41 16 chr5 85045595 85045716 -118039816 + MIR SINE MIR 117 240 -22 207 209 257 76 chr5 85046257 85046362 -118039170 - L2 LINE L2 0 3313 3190 231 36 0 0 chr5 85046374 85046402 -118039130 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 373 285 7 60 chr5 85046494 85046645 -118038887 - L2 LINE L2 -4 3309 3167 734 235 54 0 chr5 85046649 85046815 -118038717 - MIR SINE MIR -86 176 2 656 294 76 14 chr5 85046815 85047022 -118038510 - L2 LINE L2 -259 3054 2835 1948 194 68 36 chr5 85047004 85047500 -118038032 - L2 LINE L2 -1041 2273 1762 4620 227 92 19 chr5 85047504 85049319 -118036213 - L1MDb LINE L1 -3453 2953 991 3372 171 10 0 chr5 85049319 85049834 -118035698 - MLT2B1 LTR ERVL 0 520 1 4620 227 92 19 chr5 85049834 85050061 -118035471 - L1MDb LINE L1 -5415 991 782 2444 36 0 0 chr5 85050904 85051208 -118034324 - AluY SINE Alu 0 304 1 536 278 87 30 chr5 85052306 85052539 -118032993 - MIR SINE MIR 0 262 20 276 277 48 70 chr5 85052872 85053071 -118032461 + L1ME LINE L1 44 490 -5906 2187 93 16 22 chr5 85053495 85053808 -118031724 - AluY SINE Alu 0 311 1 2545 238 41 7 chr5 85054191 85054795 -118030737 - L1ME1 LINE L1 -5 6161 5537 878 282 19 31 chr5 85055430 85055689 -118029843 - MIR SINE MIR 0 262 7 441 187 90 42 chr5 85056478 85056616 -118028916 - MIR SINE MIR -31 231 87 211 255 0 0 chr5 85056657 85056704 -118028828 + C-rich Low_complexity Low_complexity 1 47 0 1895 160 3 3 chr5 85056707 85056994 -118028538 - AluJo SINE Alu -25 287 1 1628 218 24 6 chr5 85057361 85057696 -118027836 + MER58B DNA MER1_type 1 341 0 545 194 32 65 chr5 85057807 85057962 -118027570 + MIR SINE MIR 40 189 -73 225 247 27 55 chr5 85058986 85059059 -118026473 - MIR3 SINE MIR -53 155 85 380 270 9 9 chr5 85059135 85059250 -118026282 + L2 LINE L2 3190 3304 -9 1878 197 16 21 chr5 85059657 85060033 -118025499 + MLT1A2 LTR MaLR 1 374 0 324 320 21 10 chr5 85060286 85060383 -118025149 - MIR SINE MIR -128 134 37 399 290 22 22 chr5 85061067 85061205 -118024327 - MIR SINE MIR -6 256 119 743 220 50 13 chr5 85061985 85062144 -118023388 + MIR SINE MIR 11 175 -87 335 257 49 14 chr5 85062148 85062292 -118023240 - HAL1 LINE L1 -986 1521 1373 516 267 84 71 chr5 85062464 85062973 -118022559 - L1MEd LINE L1 -4867 1252 737 28 61 0 0 chr5 85064845 85064894 -118020638 + AT_rich Low_complexity Low_complexity 1 49 0 1791 258 93 42 chr5 85066279 85066881 -118018651 + MER45C DNA AcHobo 1 633 -320 441 252 35 28 chr5 85067339 85067482 -118018050 - L1MC4a LINE L1 -1943 5865 5722 383 177 0 0 chr5 85067485 85067547 -118017985 + AluJ/FRAM SINE Alu 229 290 -12 253 258 0 15 chr5 85067874 85067940 -118017592 - L2 LINE L2 0 3313 3249 1483 245 24 38 chr5 85067940 85068595 -118016937 + L1MDa LINE L1 2296 2954 -3586 180 0 0 0 chr5 85068604 85068624 -118016908 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1679 83 9 0 chr5 85068624 85068840 -118016692 - L1PA10 LINE L1 -19 6149 5932 428 259 38 94 chr5 85068871 85068952 -118016580 - L2 LINE L2 -338 2976 2892 2383 99 0 0 chr5 85068952 85069256 -118016276 + AluSq SINE Alu 1 304 -9 428 259 38 94 chr5 85069256 85069386 -118016146 - L2 LINE L2 -422 2892 2777 309 26 0 0 chr5 85069977 85070015 -118015517 + (CA)n Simple_repeat Simple_repeat 2 39 0 2170 107 23 7 chr5 85070825 85071133 -118014399 + AluSq SINE Alu 1 313 0 1962 128 0 24 chr5 85071528 85071816 -118013716 - AluSx SINE Alu -7 305 25 3713 155 54 19 chr5 85074712 85075397 -118010135 - L1MB8 LINE L1 -2 6176 5468 3234 200 14 37 chr5 85077048 85077717 -118007815 - MER82 DNA MER2_type 0 653 1 2161 111 0 3 chr5 85078103 85078401 -118007131 + AluY SINE Alu 1 297 -14 3559 98 31 14 chr5 85079166 85079675 -118005857 - L1MA3 LINE L1 0 6305 5788 338 68 0 0 chr5 85079688 85079732 -118005800 + L1MA3 LINE L1 5740 5783 -517 301 70 23 0 chr5 85079750 85079793 -118005739 + L1M1 LINE L1 5740 5783 -519 7364 121 14 3 chr5 85079793 85081430 -118004102 - L1MA3 LINE L1 -526 5779 4125 235 291 99 71 chr5 85082157 85082298 -118003234 + L2 LINE L2 2970 3114 -158 200 282 209 9 chr5 85082765 85082875 -118002657 - MIR SINE MIR -116 146 15 388 189 111 11 chr5 85082884 85082974 -118002558 + MER5A DNA MER1_type 7 105 -84 214 303 187 56 chr5 85083362 85083560 -118001972 + L2 LINE L2 2891 3114 -158 303 250 0 0 chr5 85083585 85083645 -118001887 + MIR SINE MIR 203 262 0 262 121 69 0 chr5 85083849 85083907 -118001625 - L1MA9 LINE L1 -38 6274 6213 241 319 49 116 chr5 85084340 85084685 -118000847 - L2 LINE L2 -16 3256 2935 2344 107 3 0 chr5 85084758 85085067 -118000465 - AluSp SINE Alu -3 310 1 647 272 8 14 chr5 85085145 85085348 -118000184 - MIR SINE MIR -59 203 4 384 265 0 0 chr5 85085392 85085475 -118000057 - L2 LINE L2 0 3272 3190 205 138 0 0 chr5 85085839 85085868 -117999664 + (GA)n Simple_repeat Simple_repeat 2 30 0 790 182 8 30 chr5 85086023 85086155 -117999377 + FLAM_A SINE Alu 1 129 -4 593 234 79 61 chr5 85087135 85087488 -117998044 + L2 LINE L2 2881 3312 -1 2265 60 53 0 chr5 85089416 85089698 -117995834 - AluY SINE Alu -14 297 1 732 276 61 18 chr5 85090474 85090702 -117994830 - MIR SINE MIR -2 260 23 566 244 58 102 chr5 85091316 85091558 -117993974 - MER5C DNA MER1_type -45 279 48 2295 77 0 11 chr5 85091558 85091875 -117993657 + AluSg SINE Alu 1 314 0 566 244 58 102 chr5 85091875 85091906 -117993626 - MER5C DNA MER1_type -276 48 17 2129 199 75 31 chr5 85092262 85092745 -117992787 - MLT1D LTR MaLR 0 505 2 194 286 43 0 chr5 85092925 85092995 -117992537 - MIR SINE MIR -30 232 160 6282 146 30 25 chr5 85094098 85095414 -117990118 - L1MC1 LINE L1 -5 6328 5006 1860 239 69 12 chr5 85095423 85095929 -117989603 - L1ME3A LINE L1 0 6104 5570 308 274 53 9 chr5 85095938 85096051 -117989481 - MER94 DNA DNA -1 133 16 337 262 0 0 chr5 85096087 85096171 -117989361 - L1ME3A LINE L1 -1050 5030 4947 1377 272 96 13 chr5 85096204 85097022 -117988510 - L1ME3A LINE L1 -4593 1668 670 1498 254 131 34 chr5 85097027 85097614 -117987918 - L1ME3A LINE L1 -5420 650 7 299 298 100 35 chr5 85097622 85097991 -117987541 - L1MEd LINE L1 -4129 2181 1789 542 304 131 43 chr5 85098004 85098177 -117987355 - L1MEd LINE L1 -4576 1734 1578 180 0 0 0 chr5 85098177 85098197 -117987335 + (TTA)n Simple_repeat Simple_repeat 2 21 0 542 304 131 43 chr5 85098197 85098822 -117986710 - L1MEd LINE L1 -4732 1578 823 216 245 0 0 chr5 85099454 85099503 -117986029 - MIR SINE MIR -133 129 81 390 302 101 0 chr5 85099639 85099778 -117985754 - MIR3 SINE MIR -53 155 3 189 0 0 0 chr5 85099784 85099805 -117985727 + (T)n Simple_repeat Simple_repeat 1 21 0 404 272 49 19 chr5 85100492 85100654 -117984878 + MIR3 SINE MIR 27 193 -15 21 82 0 0 chr5 85102907 85102956 -117982576 + AT_rich Low_complexity Low_complexity 1 49 0 346 299 65 19 chr5 85103422 85103683 -117981849 - L1ME LINE L1 -617 5547 5275 256 362 35 19 chr5 85103795 85104052 -117981480 - L1ME LINE L1 -1005 5141 4881 227 287 23 11 chr5 85104347 85104434 -117981098 - L1ME LINE L1 -1567 4579 4492 293 277 15 0 chr5 85104477 85104542 -117980990 + MIR SINE MIR 17 82 -180 214 188 21 0 chr5 85104566 85104614 -117980918 + L2 LINE L2 3262 3310 -3 920 205 154 2 chr5 85104659 85105044 -117980488 - L1MC/D LINE L1 -785 5361 5091 626 272 56 65 chr5 85105684 85106257 -117979275 + HAL1b LINE L1 54 621 -727 644 311 74 46 chr5 85106659 85106984 -117978548 - MLT1K LTR MaLR -61 527 194 255 293 17 0 chr5 85106983 85107041 -117978491 - MLT1K LTR MaLR -353 235 177 * 463 212 8 8 chr5 85107057 85107189 -117978343 + CT-rich Low_complexity Low_complexity 3 134 0 1403 194 119 4 chr5 85107191 85107469 -117978063 - AluJb SINE Alu -2 310 1 249 166 109 15 chr5 85107564 85107651 -117977881 - L1MC/D LINE L1 -2187 3959 3859 191 273 78 13 chr5 85107899 85107976 -117977556 + L2 LINE L2 2259 2340 -974 1199 214 22 22 chr5 85107988 85108255 -117977277 - MSTD LTR MaLR -129 267 1 1045 178 39 0 chr5 85108304 85108484 -117977048 - MER5A DNA MER1_type 0 189 3 432 319 144 40 chr5 85108628 85109023 -117976509 + L2 LINE L2 2827 3262 -10 264 209 0 60 chr5 85109449 85109516 -117976016 + L3 LINE CR1 1340 1402 -175 273 29 0 0 chr5 85110167 85110201 -117975331 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5342 31 2 5 chr5 85110203 85110808 -117974724 - L1PA4 LINE L1 0 6155 5553 221 0 35 0 chr5 85111781 85111810 -117973722 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 238 368 141 6 chr5 85112600 85112763 -117972769 + MIR SINE MIR 19 203 -59 1748 122 3 97 chr5 85113151 85113495 -117972037 + AluSx SINE Alu 2 316 0 1056 265 96 51 chr5 85113697 85114320 -117971212 - L1ME3A LINE L1 -266 5904 5254 543 218 86 75 chr5 85115003 85115177 -117970355 - MER5B DNA MER1_type -1 177 2 197 306 0 71 chr5 85116156 85116241 -117969291 + MIR3 SINE MIR 15 93 -115 338 310 155 46 chr5 85116247 85116531 -117969001 - L2 LINE L2 -1 3271 2957 281 262 132 37 chr5 85116924 85117256 -117968276 + L2 LINE L2 2684 3059 -213 442 209 97 0 chr5 85117295 85117429 -117968103 + L1M4c LINE L1 1580 1726 -4658 382 257 64 28 chr5 85117434 85117543 -117967989 - MER63 DNA MER1_type -283 779 41 12639 106 12 15 chr5 85118885 85120837 -117964695 - L1P LINE L1 -1100 5046 3101 1929 147 6 6 chr5 85121558 85121870 -117963662 + AluSx SINE Alu 1 312 0 185 154 26 0 chr5 85121917 85121956 -117963576 + GA-rich Low_complexity Low_complexity 1 40 0 2107 116 14 0 chr5 85122298 85122583 -117962949 - AluSx SINE Alu -19 293 5 2488 81 0 3 chr5 85122611 85122918 -117962614 - AluSq SINE Alu -7 306 1 316 155 0 35 chr5 85124279 85124337 -117961195 + L2 LINE L2 3254 3309 -4 2334 112 0 0 chr5 85124759 85125071 -117960461 - AluSx SINE Alu 0 312 1 520 254 117 20 chr5 85125229 85125426 -117960106 + MIR SINE MIR 13 228 -34 2858 184 63 41 chr5 85126623 85127410 -117958122 - L1ME3A LINE L1 -1039 5107 4113 1516 209 74 23 chr5 85127406 85128114 -117957418 - L1ME LINE L1 -553 5611 4863 * 575 266 87 74 chr5 85128122 85128754 -117956778 - L1ME LINE L1 -3379 2767 2128 2190 106 0 0 chr5 85128918 85129200 -117956332 - AluSg SINE Alu -28 282 1 279 282 68 29 chr5 85129692 85129795 -117955737 - L2 LINE L2 -4 3268 3162 1797 78 0 0 chr5 85130529 85130746 -117954786 + AluSg/x SINE Alu 85 301 -8 494 292 102 31 chr5 85131081 85131307 -117954225 + MIR SINE MIR 7 248 -14 5602 172 24 19 chr5 85131782 85132801 -117952731 + Tigger6a DNA MER2_type 1 1024 -59 541 172 139 0 chr5 85132811 85132933 -117952599 - L1PB4 LINE L1 -2 6154 6016 274 240 0 0 chr5 85132934 85132984 -117952548 + Tigger6a DNA MER2_type 1032 1081 -2 263 298 97 40 chr5 85133230 85133354 -117952178 + L2 LINE L2 3139 3269 -3 2441 82 3 7 chr5 85133812 85134116 -117951416 - AluSp SINE Alu -10 303 1 22 56 0 0 chr5 85134416 85134452 -117951080 + AT_rich Low_complexity Low_complexity 1 36 0 2839 168 30 8 chr5 85134528 85135053 -117950479 - MER74A LTR ERVL -21 537 1 462 266 156 43 chr5 85135109 85135505 -117950027 + L2 LINE L2 2783 3201 -112 691 234 69 25 chr5 85136048 85136322 -117949210 + L1MC5 LINE L1 7626 7911 -50 2210 97 10 13 chr5 85136343 85136652 -117948880 + AluSq SINE Alu 1 308 -5 261 297 123 0 chr5 85136662 85136800 -117948732 - L1ME3A LINE L1 -2027 4119 3965 462 318 23 28 chr5 85136958 85137134 -117948398 - L2 LINE L2 0 3272 3098 321 319 11 0 chr5 85137671 85137765 -117947767 - MIR SINE MIR -163 99 5 1764 170 7 7 chr5 85137804 85138093 -117947439 - AluJb SINE Alu -23 289 1 30 27 0 0 chr5 85144878 85144915 -117940617 + AT_rich Low_complexity Low_complexity 1 37 0 2364 90 3 0 chr5 85145182 85145481 -117940051 + AluSp SINE Alu 1 300 -13 21 0 0 0 chr5 85145604 85145625 -117939907 + AT_rich Low_complexity Low_complexity 1 21 0 208 247 62 49 chr5 85147096 85147177 -117938355 - L2 LINE L2 0 3313 3232 321 286 189 11 chr5 85147232 85147407 -117938125 - MIR SINE MIR -34 228 23 488 148 12 0 chr5 85147582 85147663 -117937869 - MER103 DNA DNA -61 105 24 299 65 22 0 chr5 85148145 85148191 -117937341 + (TG)n Simple_repeat Simple_repeat 1 47 0 3063 136 44 58 chr5 85148824 85149413 -117936119 - L1MB5 LINE L1 0 6174 5594 378 0 0 0 chr5 85153227 85153269 -117932263 + (TG)n Simple_repeat Simple_repeat 2 43 0 374 256 128 45 chr5 85153299 85153455 -117932077 - MIR3 SINE MIR -28 180 12 577 313 31 5 chr5 85154849 85155064 -117930468 - MIR SINE MIR -7 255 36 6737 139 63 14 chr5 85155864 85157037 -117928495 - Tigger3b DNA MER2_type 0 1231 1 1883 190 21 0 chr5 85157037 85157363 -117928169 - MLT1A1 LTR MaLR -32 333 1 1819 168 31 0 chr5 85157830 85158116 -117927416 - AluSx SINE Alu -17 295 1 345 273 103 49 chr5 85158609 85158832 -117926700 - MIR SINE MIR -34 228 1 228 192 58 0 chr5 85159681 85159733 -117925799 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 * 230 313 12 0 chr5 85159697 85159780 -117925752 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 1013 274 18 0 chr5 85159803 85160026 -117925506 - MIR SINE MIR -10 252 26 389 298 108 47 chr5 85160227 85160506 -117925026 - L2 LINE L2 -61 3211 2916 1694 171 3 18 chr5 85161357 85161643 -117923889 - AluJo SINE Alu -30 282 1 386 222 44 0 chr5 85163321 85163411 -117922121 + MIR SINE MIR 92 185 -77 810 224 138 10 chr5 85166704 85166900 -117918632 + MER58A DNA MER1_type 2 222 -2 2239 108 17 0 chr5 85170268 85170565 -117914967 + AluSg SINE Alu 2 303 -7 3686 218 17 17 chr5 85171352 85171963 -117913569 - MER63C DNA MER1_type -135 925 312 2449 81 0 0 chr5 85171963 85172260 -117913272 - AluY SINE Alu -14 297 1 3686 218 17 17 chr5 85172260 85172480 -117913052 - MER63C DNA MER1_type -747 313 94 839 161 81 35 chr5 85172480 85172654 -117912878 - MER58A DNA MER1_type -1 223 42 747 206 50 11 chr5 85172652 85172832 -117912700 - MER63 DNA MER1_type -15 1046 860 * 299 239 109 0 chr5 85172933 85173025 -117912507 - MER63 DNA MER1_type -828 102 1 218 329 84 7 chr5 85173125 85173268 -117912264 + L2 LINE L2 2836 2989 -283 579 278 21 16 chr5 85173539 85173730 -117911802 - MIR SINE MIR -28 234 43 2302 106 0 0 chr5 85173878 85174179 -117911353 + AluSg SINE Alu 1 301 -9 546 238 41 7 chr5 85175595 85175742 -117909790 - MER5B DNA MER1_type -1 177 26 194 265 184 10 chr5 85175957 85176055 -117909477 + L2 LINE L2 3154 3268 -4 275 285 41 49 chr5 85176209 85176332 -117909200 + L2 LINE L2 3124 3245 -27 315 0 0 0 chr5 85177626 85177661 -117907871 + (CA)n Simple_repeat Simple_repeat 2 36 0 2471 85 7 0 chr5 85177993 85178300 -117907232 - AluSc SINE Alu 0 309 1 2415 94 0 3 chr5 85179392 85179700 -117905832 + AluSx SINE Alu 1 307 -5 354 257 166 17 chr5 85180013 85180188 -117905344 - MIR SINE MIR -2 260 60 383 252 36 63 chr5 85180379 85180601 -117904931 - L1MC4 LINE L1 -1 8041 7826 3932 210 56 20 chr5 85180624 85182391 -117903141 - L1ME2 LINE L1 -4 6229 4388 2070 135 3 0 chr5 85182391 85182702 -117902830 + AluSx SINE Alu 2 313 0 3932 210 56 20 chr5 85182702 85182810 -117902722 - L1ME2 LINE L1 -1845 4388 4285 1801 251 29 39 chr5 85182810 85183234 -117902298 - L1ME2 LINE L1 -2414 3801 3385 1985 117 57 3 chr5 85183234 85183516 -117902016 + AluSg SINE Alu 1 297 -13 1801 251 29 39 chr5 85183516 85183780 -117901752 - L1ME2 LINE L1 -2830 3385 3120 789 194 0 31 chr5 85183786 85183946 -117901586 - L1MA10 LINE L1 -2 6332 6178 552 238 65 67 chr5 85183947 85184151 -117901381 - L1ME2 LINE L1 -149 6017 5825 511 114 0 0 chr5 85184151 85184230 -117901302 - L1MB8 LINE L1 -2 6176 6098 552 238 65 67 chr5 85184230 85184270 -117901262 - L1ME2 LINE L1 -341 5825 5786 1370 268 98 16 chr5 85184281 85184323 -117901209 - L1ME2 LINE L1 -3875 2521 2484 2238 94 7 3 chr5 85184323 85184620 -117900912 - AluSp SINE Alu -15 298 1 1370 268 98 16 chr5 85184620 85185253 -117900279 - L1ME2 LINE L1 -3912 2484 1791 180 0 0 0 chr5 85185430 85185450 -117900082 + (CA)n Simple_repeat Simple_repeat 2 21 0 1535 112 5 0 chr5 85186358 85186573 -117898959 - AluSp SINE Alu -1 312 97 405 278 28 0 chr5 85186833 85186941 -117898591 + L2 LINE L2 3201 3311 -2 700 224 33 3 chr5 85187794 85187974 -117897558 + MER5A DNA MER1_type 3 176 -2 261 306 40 8 chr5 85187981 85188020 -117897512 - MIR SINE MIR -64 198 162 1541 182 115 95 chr5 85188020 85188488 -117897044 + MLT2B2 LTR ERVL 1 481 -34 360 0 0 0 chr5 85188488 85188528 -117897004 + (CA)n Simple_repeat Simple_repeat 2 41 0 1541 182 115 95 chr5 85188528 85188564 -117896968 + MLT2B2 LTR ERVL 481 515 0 261 306 40 8 chr5 85188564 85188648 -117896884 - MIR SINE MIR -100 162 71 2343 87 0 0 chr5 85188656 85188942 -117896590 + AluSc SINE Alu 1 286 -23 360 271 179 0 chr5 85189086 85189237 -117896295 - MER5A DNA MER1_type -2 187 10 769 177 43 0 chr5 85189262 85189426 -117896106 + MER5A DNA MER1_type 17 187 -2 434 268 150 60 chr5 85191204 85191931 -117893601 - L2 LINE L2 -32 3240 2454 24 53 0 0 chr5 85192145 85192183 -117893349 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr5 85192350 85192376 -117893156 + AT_rich Low_complexity Low_complexity 1 26 0 225 266 0 16 chr5 85192917 85192981 -117892551 - L1ME3 LINE L1 -9 6153 6091 32762 95 14 71 chr5 85192983 85196343 -117889189 - L1PA7 LINE L1 -2 6152 2600 2137 117 31 0 chr5 85196343 85196634 -117888898 - AluSg SINE Alu -10 300 1 32762 95 14 71 chr5 85196634 85197412 -117888120 - L1PA7 LINE L1 -3554 2600 1779 2582 4 0 0 chr5 85197412 85197685 -117887847 - AluYb8 SINE Alu -1 317 45 32762 95 14 71 chr5 85197685 85200077 -117885455 - L1PA7 LINE L1 -4375 1779 9 1920 208 147 34 chr5 85200090 85200677 -117884855 - L1ME2 LINE L1 -64 6100 5448 343 228 55 47 chr5 85201349 85201476 -117884056 + MIR SINE MIR 21 148 -114 200 57 0 29 chr5 85202307 85202342 -117883190 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2510 143 74 0 chr5 85202798 85203219 -117882313 - LTR47A LTR ERVL 0 452 1 8657 163 87 99 chr5 85203226 85203668 -117881864 - MER83B-int LTR ERV1 -258 5699 5253 2034 133 7 3 chr5 85203668 85203968 -117881564 + AluSx SINE Alu 10 310 -2 8657 163 87 99 chr5 85203968 85205674 -117879858 - MER83B-int LTR ERV1 -704 5253 3528 2486 55 3 0 chr5 85205674 85205964 -117879568 - AluY SINE Alu -20 291 1 8657 163 87 99 chr5 85205964 85207576 -117877956 - MER83B-int LTR ERV1 -2429 3528 1450 2180 129 10 0 chr5 85207576 85207879 -117877653 - AluSx SINE Alu -6 306 1 8657 163 87 99 chr5 85207879 85208146 -117877386 - MER83B-int LTR ERV1 -4507 1450 1181 310 116 42 189 chr5 85208190 85208285 -117877247 - MER83B-int LTR ERV1 -3220 2726 2646 * 976 252 87 73 chr5 85208283 85208708 -117876824 - MER83B-int LTR ERV1 -4050 2281 1851 493 201 83 35 chr5 85208683 85208827 -117876705 - MER83B-int LTR ERV1 -2594 2286 2136 * 2242 107 7 3 chr5 85208862 85209170 -117876362 - AluSx SINE Alu -3 309 1 256 307 184 0 chr5 85209318 85209432 -117876100 - LTR47A-int LTR ERVL -5194 149 15 2397 138 41 36 chr5 85209454 85209895 -117875637 - LTR47A LTR ERVL -9 443 1 234 339 94 0 chr5 85211258 85211385 -117874147 + MIR3 SINE MIR 30 168 -40 275 254 119 17 chr5 85211597 85211715 -117873817 + MIR SINE MIR 99 228 -34 536 294 28 0 chr5 85212030 85212210 -117873322 + MIR SINE MIR 66 250 -12 23 54 0 0 chr5 85212785 85212822 -117872710 + AT_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr5 85212989 85213034 -117872498 + AT_rich Low_complexity Low_complexity 1 45 0 987 286 4 0 chr5 85213187 85213439 -117872093 - MIR SINE MIR -2 260 8 26 30 0 0 chr5 85214133 85214166 -117871366 + AT_rich Low_complexity Low_complexity 1 33 0 2174 93 3 43 chr5 85214355 85214534 -117870998 - AluSp SINE Alu -4 309 147 2130 110 7 13 chr5 85214534 85214834 -117870698 - AluSg SINE Alu -12 298 1 2174 93 3 43 chr5 85214834 85214976 -117870556 - AluSp SINE Alu -166 147 1 29 0 0 0 chr5 85215494 85215523 -117870009 + AT_rich Low_complexity Low_complexity 1 29 0 202 310 108 29 chr5 85216044 85216360 -117869172 - L2 LINE L2 -1057 2257 1917 2135 104 34 0 chr5 85216553 85216851 -117868681 + AluSp SINE Alu 1 308 -5 991 282 93 93 chr5 85218080 85219305 -117866227 - L2 LINE L2 -97 3216 1987 207 200 89 0 chr5 85219957 85220002 -117865530 + MIR SINE MIR 103 151 -57 2578 167 57 7 chr5 85220615 85221070 -117864462 - MER66A LTR ERV1 0 478 1 796 11 0 0 chr5 85221395 85221484 -117864048 - L1PA4 LINE L1 -3 6152 6064 2159 104 0 44 chr5 85224966 85225282 -117860250 - AluY SINE Alu -9 302 1 2365 104 0 3 chr5 85225904 85226211 -117859321 - AluSx SINE Alu -6 306 1 430 272 55 51 chr5 85227404 85227621 -117857911 + L2 LINE L2 2826 3043 -229 735 264 126 0 chr5 85227641 85227823 -117857709 - MER3 DNA MER1_type -4 205 1 242 387 27 9 chr5 85227932 85228043 -117857489 + L2 LINE L2 3141 3253 -19 4823 124 29 31 chr5 85233427 85234175 -117851357 - L1PA16 LINE L1 -19 6147 5399 2068 123 20 3 chr5 85234175 85234477 -117851055 - AluSx SINE Alu -5 307 1 4823 124 29 31 chr5 85234477 85234543 -117850989 - L1PA16 LINE L1 -767 5399 5334 1284 171 54 39 chr5 85235071 85235351 -117850181 - Charlie1 DNA MER1_type -917 1844 1561 870 208 11 28 chr5 85235352 85235530 -117850002 - FRAM SINE Alu -1 175 1 656 190 63 42 chr5 85235531 85235673 -117849859 - Charlie1 DNA MER1_type -1188 1573 1429 1987 139 28 0 chr5 85235820 85236107 -117849425 + AluSx SINE Alu 1 295 -17 195 253 115 35 chr5 85236156 85236243 -117849289 + MIR SINE MIR 90 183 -79 30 59 0 0 chr5 85237943 85237994 -117847538 + AT_rich Low_complexity Low_complexity 1 51 0 26 0 0 0 chr5 85239610 85239636 -117845896 + AT_rich Low_complexity Low_complexity 1 26 0 8257 140 96 12 chr5 85239965 85242101 -117843431 + Tigger1 DNA MER2_type 1 2418 0 271 189 67 56 chr5 85242505 85242595 -117842937 + MIR3 SINE MIR 96 186 -22 1831 124 73 4 chr5 85244601 85244876 -117840656 + AluSq SINE Alu 1 294 -19 195 287 56 19 chr5 85244934 85245042 -117840490 - L2 LINE L2 -1682 1632 1521 1498 110 38 0 chr5 85245058 85245267 -117840265 + AluSg/x SINE Alu 81 297 -13 359 236 45 73 chr5 85246002 85246112 -117839420 + L2 LINE L2 3186 3292 -21 271 342 124 15 chr5 85249538 85249730 -117835802 - MIR SINE MIR -50 212 7 251 213 95 16 chr5 85250118 85250206 -117835326 - MIR SINE MIR -63 145 50 27 62 0 0 chr5 85250362 85250410 -117835122 + AT_rich Low_complexity Low_complexity 1 48 0 686 286 113 43 chr5 85251679 85252078 -117833454 + L1ME4a LINE L1 4743 5112 -1009 2034 94 4 0 chr5 85252078 85252334 -117833198 + AluSx SINE Alu 25 281 -31 234 62 0 0 chr5 85252337 85252369 -117833163 + (CA)n Simple_repeat Simple_repeat 2 33 0 686 286 113 43 chr5 85252369 85253012 -117832520 + L1ME4a LINE L1 5113 5874 -247 22 35 0 0 chr5 85253113 85253142 -117832390 + AT_rich Low_complexity Low_complexity 1 29 0 2599 51 0 10 chr5 85253215 85253529 -117832003 + AluY SINE Alu 1 311 0 22 56 0 0 chr5 85253617 85253653 -117831879 + AT_rich Low_complexity Low_complexity 1 36 0 270 375 39 0 chr5 85253681 85253785 -117831747 + MIR SINE MIR 38 145 -63 2169 129 10 0 chr5 85254500 85254802 -117830730 - AluSx SINE Alu -7 305 1 16144 99 30 8 chr5 85255522 85258510 -117827022 + L1PA8A LINE L1 3101 6119 -12 2111 117 0 0 chr5 85259210 85259528 -117826004 + AluSg SINE Alu 1 318 0 190 281 254 9 chr5 85261170 85261284 -117824248 - L2 LINE L2 -8 3264 3123 2336 185 127 8 chr5 85264607 85265110 -117820422 + MLT1F1 LTR MaLR 5 567 0 3985 179 74 23 chr5 85265461 85266790 -117818742 - L1MB8 LINE L1 -346 5832 4443 806 180 0 0 chr5 85266808 85266930 -117818602 - FLAM_C SINE Alu -19 124 3 2941 197 21 35 chr5 85266932 85267321 -117818211 - L1MB8 LINE L1 -1718 4428 4052 1911 163 10 16 chr5 85267321 85267627 -117817905 - AluJo SINE Alu -8 304 1 2941 197 21 35 chr5 85267627 85267943 -117817589 - L1MB8 LINE L1 -2094 4052 3733 546 271 142 18 chr5 85267962 85268301 -117817231 - L1ME4a LINE L1 -247 5874 5494 284 274 12 0 chr5 85270286 85270370 -117815162 + MER112 DNA MER1_type 1 85 -175 2180 163 21 38 chr5 85270475 85270899 -117814633 - MER47B DNA MER2_type 0 418 2 2302 111 49 0 chr5 85271177 85271521 -117814011 - MER46B DNA MER2_type 0 236 1 243 88 0 0 chr5 85271916 85271950 -117813582 + (TATG)n Simple_repeat Simple_repeat 2 35 0 2143 109 7 7 chr5 85272183 85272476 -117813056 + AluSg SINE Alu 3 295 -15 876 194 69 60 chr5 85272616 85272754 -117812778 + MIR SINE MIR 8 150 -112 2308 102 3 0 chr5 85272754 85273059 -117812473 + AluSq SINE Alu 1 306 -7 876 194 69 60 chr5 85273059 85273152 -117812380 + MIR SINE MIR 150 241 -21 28 48 0 0 chr5 85273207 85273249 -117812283 + AT_rich Low_complexity Low_complexity 1 42 0 30 77 0 0 chr5 85274065 85274130 -117811402 + AT_rich Low_complexity Low_complexity 1 65 0 1560 129 126 11 chr5 85274903 85275174 -117810358 - AluSg1 SINE Alu -7 302 1 200 286 0 0 chr5 85275675 85275724 -117809808 + MIR3 SINE MIR 157 205 -3 678 167 80 6 chr5 85278056 85278218 -117807314 - MER104 DNA Tc2 0 180 7 181 261 0 0 chr5 85278295 85278341 -117807191 + L2 LINE L2 3268 3313 0 341 110 41 41 chr5 85278585 85278658 -117806874 + Alu SINE Alu 229 301 0 486 212 8 8 chr5 85279485 85279603 -117805929 - L1MC5 LINE L1 -396 7565 7448 3221 43 0 3 chr5 85279612 85280003 -117805529 + L1PA5 LINE L1 5737 6126 -28 818 228 35 54 chr5 85280010 85280269 -117805263 - L1MC5 LINE L1 -522 7439 7186 32203 40 4 5 chr5 85280297 85285081 -117800451 + L1PA4 LINE L1 1377 6153 -2 42140 36 24 2 chr5 85285436 85291454 -117794078 + L1PA3 LINE L1 1 6155 0 1910 133 43 0 chr5 85291644 85291923 -117793609 - AluSg SINE Alu -19 291 1 2377 93 0 0 chr5 85292120 85292421 -117793111 + AluSg SINE Alu 1 301 -9 1724 212 126 26 chr5 85292671 85293276 -117792256 - L1MC5 LINE L1 -44 7917 7253 745 214 132 94 chr5 85293351 85293751 -117791781 + MER34B LTR ERV1 10 393 -172 1775 162 17 7 chr5 85293751 85294047 -117791485 - AluJb SINE Alu -13 299 1 745 214 132 94 chr5 85294047 85294090 -117791442 + MER34B LTR ERV1 393 433 -132 312 27 0 0 chr5 85294090 85294127 -117791405 + (TG)n Simple_repeat Simple_repeat 1 37 0 745 214 132 94 chr5 85294127 85294177 -117791355 + MER34B LTR ERV1 433 499 -66 1062 163 63 67 chr5 85294247 85294547 -117790985 - L1MC5 LINE L1 -772 7189 6891 272 327 19 9 chr5 85295410 85295517 -117790015 + LTR16B LTR ERVL 34 141 -323 537 296 78 35 chr5 85295565 85295822 -117789710 + LTR16A LTR ERVL 173 440 -10 910 219 131 77 chr5 85296989 85297510 -117788022 + MLT1H LTR MaLR 1 549 0 1151 276 81 84 chr5 85298175 85298868 -117786664 + MER21B LTR ERV1 24 714 -149 762 144 0 0 chr5 85298917 85299035 -117786497 + FLAM_C SINE Alu 1 118 -15 33 0 0 0 chr5 85299035 85299068 -117786464 + AT_rich Low_complexity Low_complexity 1 33 0 519 317 40 5 chr5 85299275 85299477 -117786055 - L2 LINE L2 0 3313 3105 207 170 0 0 chr5 85300181 85300228 -117785304 + A-rich Low_complexity Low_complexity 1 47 0 228 160 93 27 chr5 85300414 85300489 -117785043 + L1MB7 LINE L1 6105 6184 0 235 283 0 0 chr5 85300587 85300640 -117784892 + L2 LINE L2 3220 3272 0 1212 97 0 0 chr5 85300711 85300865 -117784667 - AluSx SINE Alu -158 154 1 1081 159 6 11 chr5 85300865 85301047 -117784485 - MER20 DNA MER1_type -38 181 1 3566 25 23 5 chr5 85301611 85302051 -117783481 + LTR7 LTR ERV1 1 448 -2 344 275 132 93 chr5 85302574 85302952 -117782580 + L1MB4 LINE L1 630 1022 -5827 444 213 253 13 chr5 85303383 85303533 -117781999 - MIR SINE MIR -8 254 69 625 251 17 11 chr5 85303649 85303824 -117781708 + MER5B DNA MER1_type 3 178 0 12449 204 32 8 chr5 85304574 85308870 -117776662 + L1MB4 LINE L1 2476 6880 -2 1577 194 61 38 chr5 85308871 85309141 -117776391 + L1M4 LINE L1 4789 5076 -1070 1885 183 0 0 chr5 85309141 85309453 -117776079 + AluJo SINE Alu 1 312 0 1577 194 61 38 chr5 85309453 85309677 -117775855 + L1M4 LINE L1 5076 5294 -852 1250 255 23 49 chr5 85310467 85310993 -117774539 + L1MDb LINE L1 784 1295 -5114 1066 266 17 6 chr5 85310973 85311327 -117774205 + L1MDb LINE L1 3434 3791 -2615 * 37926 83 9 9 chr5 85311507 85317655 -117767877 + L1PA6 LINE L1 4 6152 -2 502 216 0 0 chr5 85317793 85317909 -117767623 + L1MB2 LINE L1 6054 6169 -2 296 190 52 170 chr5 85317957 85318321 -117767211 - HAL1 LINE L1 -113 2394 2074 535 181 112 14 chr5 85318322 85318485 -117767047 - L1M4c LINE L1 -4552 1751 1265 6050 150 5 1 chr5 85318695 85320001 -117765531 - L1PB1 LINE L1 -8 6143 4833 407 230 0 0 chr5 85320004 85320091 -117765441 - L1MDb LINE L1 -1217 5740 5654 3653 195 58 32 chr5 85320091 85321038 -117764494 - L1MDb LINE L1 -1679 5278 4307 363 171 0 24 chr5 85321043 85321125 -117764407 - L1MA2 LINE L1 0 6304 6225 1639 179 34 0 chr5 85321135 85321426 -117764106 - AluJb SINE Alu -11 301 1 4474 243 63 49 chr5 85322302 85323634 -117761898 - L1MDb LINE L1 -2678 4279 2967 2291 109 0 3 chr5 85323634 85323946 -117761586 - AluY SINE Alu 0 311 1 4474 243 63 49 chr5 85323946 85324100 -117761432 - L1MDb LINE L1 -3990 2967 2817 2220 114 62 14 chr5 85324100 85324458 -117761074 + THE1C LTR MaLR 1 375 0 4474 243 63 49 chr5 85324458 85324520 -117761012 - L1MDb LINE L1 -4140 2817 2757 194 0 0 37 chr5 85324520 85324547 -117760985 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 4474 243 63 49 chr5 85324547 85325245 -117760287 - L1MDb LINE L1 -4200 2757 2029 545 121 52 17 chr5 85325417 85325533 -117759999 + L1MB8 LINE L1 6049 6168 -10 1613 205 3 3 chr5 85325547 85325871 -117759661 - AluJb SINE Alu 0 324 1 2348 81 0 3 chr5 85325986 85326282 -117759250 - AluSc SINE Alu -14 295 1 2828 244 78 46 chr5 85326285 85326877 -117758655 - L1ME3 LINE L1 -68 6102 5530 1807 159 14 113 chr5 85326877 85327310 -117758222 + MLT1B LTR MaLR 1 390 0 2828 244 78 46 chr5 85327310 85327884 -117757648 - L1ME3 LINE L1 -640 5530 4976 2699 204 63 8 chr5 85327884 85328501 -117757031 + MER82 DNA MER2_type 3 653 0 2828 244 78 46 chr5 85328501 85329527 -117756005 - L1ME3 LINE L1 -1194 4976 3719 478 191 36 0 chr5 85330063 85330173 -117755359 - L1ME3 LINE L1 -2427 3719 3606 816 261 35 16 chr5 85330277 85330578 -117754954 - L1MDb LINE L1 -4976 1968 1619 1515 178 33 11 chr5 85330580 85330856 -117754676 - AluJb SINE Alu -30 282 1 3202 173 94 25 chr5 85330857 85331579 -117753953 - L1MDb LINE L1 -5238 1621 850 632 222 37 19 chr5 85331616 85331778 -117753754 - HAL1 LINE L1 -579 1928 1764 2414 188 62 2 chr5 85331790 85332307 -117753225 + L1MB8 LINE L1 5622 6169 -9 575 249 149 37 chr5 85332395 85332501 -117753031 - MLT1L LTR MaLR -347 268 175 2382 104 19 25 chr5 85332501 85332867 -117752665 - THE1B LTR MaLR 0 364 1 575 249 149 37 chr5 85332867 85333001 -117752531 - MLT1L LTR MaLR -440 175 1 484 312 0 13 chr5 85333050 85333207 -117752325 - MIR SINE MIR -79 183 29 2112 104 52 0 chr5 85333209 85333498 -117752034 - AluSx SINE Alu -8 304 1 28 29 0 0 chr5 85333499 85333534 -117751998 + AT_rich Low_complexity Low_complexity 1 35 0 762 201 55 6 chr5 85334578 85334742 -117750790 - MER5B DNA MER1_type 0 178 7 183 42 0 0 chr5 85334769 85334793 -117750739 + (GA)n Simple_repeat Simple_repeat 1 24 0 423 38 0 0 chr5 85334793 85334846 -117750686 + (TG)n Simple_repeat Simple_repeat 1 53 0 2266 88 14 3 chr5 85334911 85335208 -117750324 + AluSc SINE Alu 1 300 -9 227 268 207 18 chr5 85336580 85336744 -117748788 - L1ME4a LINE L1 -84 6037 5843 300 357 48 97 chr5 85336775 85337044 -117748488 + L2 LINE L2 2992 3247 -25 6744 126 64 10 chr5 85337058 85338203 -117747329 - Tigger3b DNA MER2_type -1 1230 24 643 265 135 33 chr5 85338291 85338713 -117746819 - L1ME4a LINE L1 -299 5822 5358 29 0 0 0 chr5 85338804 85338833 -117746699 + AT_rich Low_complexity Low_complexity 1 29 0 762 274 94 74 chr5 85338887 85339178 -117746354 - MLT1J LTR MaLR 0 511 204 2234 110 3 3 chr5 85339178 85339487 -117746045 + AluSc SINE Alu 1 309 0 762 274 94 74 chr5 85339487 85339696 -117745836 - MLT1J LTR MaLR -307 204 1 261 0 0 0 chr5 85339818 85339847 -117745685 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr5 85340073 85340098 -117745434 + (TA)n Simple_repeat Simple_repeat 1 25 0 26 0 0 0 chr5 85342091 85342117 -117743415 + AT_rich Low_complexity Low_complexity 1 26 0 34 24 0 0 chr5 85342320 85342361 -117743171 + AT_rich Low_complexity Low_complexity 1 41 0 285 301 37 52 chr5 85342775 85342911 -117742621 - MIR SINE MIR -47 215 82 2192 106 12 26 chr5 85343542 85343883 -117741649 - MER1B DNA MER1_type 0 337 2 924 225 22 79 chr5 85343999 85344355 -117741177 + MER46C DNA MER2_type 2 337 -1 2218 123 0 0 chr5 85344799 85345099 -117740433 + AluSc SINE Alu 1 300 -9 2208 88 35 0 chr5 85345471 85345756 -117739776 + AluSx SINE Alu 1 295 -17 1806 167 0 14 chr5 85346745 85347039 -117738493 + AluJo SINE Alu 1 290 -22 183 80 0 0 chr5 85347744 85347769 -117737763 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 262 297 81 18 chr5 85347770 85347881 -117737651 - L2 LINE L2 -11 3302 3185 284 284 58 52 chr5 85348200 85348355 -117737177 - MIR3 SINE MIR -23 185 30 555 244 54 60 chr5 85348528 85348877 -117736655 - L1MC5 LINE L1 -51 7910 7564 5440 269 74 27 chr5 85349580 85352378 -117733154 + L1ME2 LINE L1 2131 5058 -1088 2413 213 135 9 chr5 85352511 85353193 -117732339 + L1ME2 LINE L1 5387 6154 -10 4495 163 56 13 chr5 85353359 85354576 -117730956 + L1MB5 LINE L1 4905 6174 0 1389 264 58 24 chr5 85354726 85355189 -117730343 + L1ME3A LINE L1 5478 5956 -214 379 225 115 50 chr5 85355272 85355454 -117730078 + L1ME3A LINE L1 5962 6155 -15 379 272 100 81 chr5 85355463 85355779 -117729753 + L1M1 LINE L1 5470 5791 -511 2113 113 7 0 chr5 85356881 85357165 -117728367 - AluSx SINE Alu -15 297 12 264 265 128 10 chr5 85357188 85357290 -117728242 - L2 LINE L2 -8 3264 3151 375 328 30 30 chr5 85358661 85358795 -117726737 - L2 LINE L2 -2 3270 3137 1884 168 42 3 chr5 85358993 85359327 -117726205 + MER7A DNA MER2_type 1 345 -1 2391 226 25 28 chr5 85359671 85360242 -117725290 - MER74B LTR ERVL -6 616 48 1601 181 9 26 chr5 85360391 85360733 -117724799 - L1PB4 LINE L1 -8 6148 5813 2440 110 11 14 chr5 85360745 85361108 -117724424 - L1PA16 LINE L1 -10 6156 5795 1531 204 79 20 chr5 85361341 85361694 -117723838 - MLT1A2 LTR MaLR 0 374 1 500 248 147 19 chr5 85361812 85361969 -117723563 - MER5A DNA MER1_type -3 186 10 494 204 238 14 chr5 85362015 85362162 -117723370 + MIR SINE MIR 1 180 -82 1254 140 10 14 chr5 85362956 85363163 -117722369 + AluJb SINE Alu 93 298 -14 381 131 0 0 chr5 85363166 85363227 -117722305 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 6579 86 2 18 chr5 85363591 85363927 -117721605 + L1PA11 LINE L1 5187 5527 -647 2338 111 0 0 chr5 85363927 85364234 -117721298 - AluSx SINE Alu -4 308 2 6579 86 2 18 chr5 85364234 85364898 -117720634 + L1PA11 LINE L1 5527 6172 -2 513 107 24 0 chr5 85365102 85365186 -117720346 + L1 LINE L1 4110 4195 -1951 793 239 14 10 chr5 85365187 85365396 -117720136 + L1PB1 LINE L1 7 216 -6647 * 9228 144 35 2 chr5 85365373 85367793 -117717739 + L1PB1 LINE L1 1392 3890 -2972 10304 165 9 8 chr5 85368723 85371726 -117713806 + L1PB1 LINE L1 3860 6860 -7 5171 174 42 14 chr5 85371737 85373704 -117711828 + L1PA16 LINE L1 4180 6202 0 2123 133 0 0 chr5 85373837 85374137 -117711395 + AluSx SINE Alu 1 300 -12 2152 95 0 3 chr5 85374139 85374502 -117711030 + AluSx SINE Alu 3 364 0 3228 211 59 26 chr5 85374650 85375575 -117709957 + L1MD1 LINE L1 4299 5289 -953 1235 191 15 111 chr5 85375575 85375979 -117709553 - MLT1A1 LTR MaLR 0 365 1 3228 211 59 26 chr5 85375979 85376734 -117708798 + L1MD1 LINE L1 5289 6017 -225 1776 186 19 6 chr5 85376735 85377046 -117708486 + MLT1A1 LTR MaLR 1 315 -50 36 40 0 0 chr5 85377046 85377096 -117708436 + AT_rich Low_complexity Low_complexity 1 50 0 330 133 100 0 chr5 85377100 85377160 -117708372 + MLT1A1 LTR MaLR 309 374 0 1355 198 29 29 chr5 85377162 85377273 -117708259 + L1MD2 LINE L1 6019 6129 -230 1495 170 121 0 chr5 85377273 85377538 -117707994 + AluJb SINE Alu 1 297 -15 1355 198 29 29 chr5 85377538 85377740 -117707792 + L1MD2 LINE L1 6128 6332 -27 1820 160 3 7 chr5 85377753 85378046 -117707486 - AluJo SINE Alu -20 292 1 962 235 113 14 chr5 85378073 85378515 -117707017 + L1ME3A LINE L1 4385 4870 -1276 2280 104 3 3 chr5 85378532 85378841 -117706691 - AluSx SINE Alu -3 309 1 1109 155 6 6 chr5 85378850 85379031 -117706501 - AluSg/x SINE Alu -18 294 114 1387 235 87 10 chr5 85379095 85379486 -117706046 - LTR52 LTR ERVL 0 421 1 1177 256 112 44 chr5 85379486 85380411 -117705121 + L1ME3A LINE L1 4957 5967 -203 210 37 0 0 chr5 85380531 85380558 -117704974 + (A)n Simple_repeat Simple_repeat 1 27 0 29 28 0 0 chr5 85380604 85380640 -117704892 + AT_rich Low_complexity Low_complexity 1 36 0 1489 175 124 26 chr5 85381540 85381888 -117703644 + MER63B DNA MER1_type 1 382 -54 219 232 80 0 chr5 85382005 85382143 -117703389 + (TA)n Simple_repeat Simple_repeat 1 149 0 470 304 109 72 chr5 85385273 85385549 -117699983 + L2 LINE L2 2987 3272 0 290 276 26 0 chr5 85386014 85386090 -117699442 - L2 LINE L2 0 3272 3195 24 32 0 0 chr5 85386178 85386209 -117699323 + AT_rich Low_complexity Low_complexity 1 31 0 568 325 84 0 chr5 85386365 85386568 -117698964 + MIR SINE MIR 20 239 -23 715 216 0 0 chr5 85386708 85386833 -117698699 + FLAM_C SINE Alu 1 125 -18 465 345 141 20 chr5 85386995 85387499 -117698033 + L2 LINE L2 2069 2633 -681 322 243 250 26 chr5 85387499 85387651 -117697881 + MER5A DNA MER1_type 1 186 -3 388 264 47 0 chr5 85388089 85388195 -117697337 - MIR SINE MIR -58 204 94 207 377 29 0 chr5 85388261 85388330 -117697202 - MIR SINE MIR -186 76 6 204 238 32 32 chr5 85388325 85388388 -117697144 - MIR3 SINE MIR -2 206 144 * 189 0 0 0 chr5 85389787 85389808 -117695724 + (A)n Simple_repeat Simple_repeat 1 21 0 188 312 72 64 chr5 85389818 85389943 -117695589 + MER5A DNA MER1_type 26 151 -38 21 82 0 0 chr5 85392436 85392485 -117693047 + AT_rich Low_complexity Low_complexity 1 49 0 279 310 177 0 chr5 85394357 85394470 -117691062 - MIR SINE MIR -108 154 22 189 0 0 0 chr5 85395371 85395392 -117690140 + (TC)n Simple_repeat Simple_repeat 2 22 0 768 59 0 0 chr5 85395395 85395496 -117690036 - L1PA8 LINE L1 -2 6170 6070 2208 102 0 0 chr5 85396139 85396456 -117689076 + AluSx SINE Alu 1 317 0 298 262 61 79 chr5 85398832 85398996 -117686536 + L2 LINE L2 2301 2461 -853 461 224 58 34 chr5 85399443 85399661 -117685871 + L1P5 LINE L1 5289 5520 -636 441 313 28 6 chr5 85399649 85399825 -117685707 + L1ME LINE L1 5539 5718 -452 * 298 211 0 53 chr5 85399822 85399898 -117685634 + L1M4b LINE L1 897 968 -5891 * 1832 197 29 48 chr5 85399898 85400314 -117685218 - MER47B DNA MER2_type 0 418 11 1668 200 34 47 chr5 85400395 85400731 -117684801 + L1M4b LINE L1 1223 1550 -5305 2011 102 85 0 chr5 85400731 85401014 -117684518 + AluSq SINE Alu 1 307 -6 1668 200 34 47 chr5 85401014 85401273 -117684259 + L1M4b LINE L1 1550 1811 -5044 246 277 336 0 chr5 85501353 85501472 -117584060 - MIR SINE MIR 0 262 104 351 274 26 35 chr5 85501487 85501600 -117583932 + L3 LINE CR1 1357 1468 -109 583 245 240 15 chr5 85501840 85502040 -117583492 + MIR SINE MIR 1 245 -17 242 305 24 0 chr5 85502042 85502124 -117583408 + MIR SINE MIR 74 157 -105 216 289 96 39 chr5 85502197 85502301 -117583231 - MIR SINE MIR 0 262 153 1575 97 21 51 chr5 85503554 85503726 -117581806 + MER30 DNA MER1_type 1 166 -64 2208 118 0 0 chr5 85503726 85504022 -117581510 + AluSx SINE Alu 4 299 -13 1575 97 21 51 chr5 85504022 85504086 -117581446 + MER30 DNA MER1_type 166 230 0 286 302 28 9 chr5 85504182 85504288 -117581244 + MIR SINE MIR 97 204 -58 192 368 96 12 chr5 85504824 85504990 -117580542 - L3 LINE CR1 -134 1443 1264 21 0 0 0 chr5 85505509 85505530 -117580002 + AT_rich Low_complexity Low_complexity 1 21 0 209 271 0 29 chr5 85506193 85506263 -117579269 + GA-rich Low_complexity Low_complexity 3 70 0 734 231 128 13 chr5 85506518 85506752 -117578780 + MIR SINE MIR 2 262 0 261 262 0 0 chr5 85508190 85508251 -117577281 + MIR SINE MIR 185 245 -17 1854 64 9 0 chr5 85508288 85508508 -117577024 - AluSc SINE Alu -17 292 71 2734 10 0 3 chr5 85508508 85508803 -117576729 - AluYa5 SINE Alu -14 297 2 627 108 0 0 chr5 85508804 85508887 -117576645 - AluSc SINE Alu -225 84 2 2256 119 0 7 chr5 85511663 85511965 -117573567 + AluSx SINE Alu 1 300 -12 194 303 0 45 chr5 85512158 85512224 -117573308 - L2 LINE L2 -10 3262 3200 23 0 0 0 chr5 85512230 85512253 -117573279 + AT_rich Low_complexity Low_complexity 1 23 0 205 350 60 56 chr5 85512410 85512676 -117572856 - L2 LINE L2 -168 3104 2838 348 220 135 35 chr5 85513244 85513385 -117572147 + MLT1J1 LTR MaLR 31 185 -261 590 86 46 29 chr5 85513997 85514171 -117571361 + (TA)n Simple_repeat Simple_repeat 1 177 0 2686 156 79 0 chr5 85514487 85514955 -117570577 + L1M3f LINE L1 4 508 -4820 230 225 38 50 chr5 85515656 85515736 -117569796 - MER20B DNA MER1_type -640 143 65 27786 42 3 1 chr5 85515995 85522138 -117563394 - L1PA4 LINE L1 0 6155 2 7465 118 3 21 chr5 85522945 85525165 -117560367 + L1MA3 LINE L1 4127 6305 0 433 261 69 69 chr5 85525561 85525679 -117559853 - MER5A DNA MER1_type 0 189 69 643 135 0 10 chr5 85525679 85525783 -117559749 - L1MB5 LINE L1 0 6174 6072 433 261 69 69 chr5 85525783 85525852 -117559680 - MER5A DNA MER1_type -119 70 2 2223 136 0 0 chr5 85526340 85526648 -117558884 + AluSx SINE Alu 1 308 -4 274 276 0 2 chr5 85527741 85527818 -117557714 + MIR SINE MIR 40 115 -93 741 159 0 0 chr5 85527820 85527927 -117557605 + FLAM_C SINE Alu 12 118 -25 24 0 0 0 chr5 85527927 85527951 -117557581 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 85528035 85528056 -117557476 + (CTATA)n Simple_repeat Simple_repeat 3 23 0 298 169 127 0 chr5 85528434 85528505 -117557027 + MLT1J1 LTR MaLR 364 443 -3 502 264 98 114 chr5 85528505 85529006 -117556526 + L2 LINE L2 2821 3313 0 232 293 0 0 chr5 85529235 85529293 -117556239 - MIR3 SINE MIR -32 176 119 262 266 16 0 chr5 85530306 85530370 -117555162 - L2 LINE L2 0 3272 3208 188 306 0 0 chr5 85530378 85530427 -117555105 - L2 LINE L2 -7 3306 3258 488 251 103 41 chr5 85532427 85532600 -117552932 + MIR SINE MIR 18 199 -63 2940 0 0 0 chr5 85534339 85534646 -117550886 + AluYa5 SINE Alu 1 307 -4 604 183 64 146 chr5 85534657 85534985 -117550547 - L1MC5 LINE L1 -48 7913 7613 287 308 41 123 chr5 85535545 85535912 -117549620 - L2 LINE L2 -12 3260 2924 200 306 121 16 chr5 85537666 85537790 -117547742 + L2 LINE L2 3134 3270 -2 387 0 0 0 chr5 85539120 85539163 -117546369 + (CA)n Simple_repeat Simple_repeat 2 44 0 1978 140 7 0 chr5 85539250 85539528 -117546004 + AluJb SINE Alu 9 288 -24 1911 102 34 0 chr5 85539592 85539856 -117545676 - AluSx SINE Alu 0 312 40 311 319 150 6 chr5 85541109 85541269 -117544263 + MER5A DNA MER1_type 7 189 0 211 284 459 0 chr5 85541768 85541877 -117543655 - MER91A DNA MER1_type -34 162 4 277 253 176 0 chr5 85542557 85542648 -117542884 + L2 LINE L2 3146 3252 -20 2268 207 94 31 chr5 85542868 85543409 -117542123 + MLT1E2 LTR MaLR 52 626 0 2079 127 0 29 chr5 85543871 85544187 -117541345 + AluSx SINE Alu 1 307 -5 2017 141 0 7 chr5 85544208 85544492 -117541040 + AluSx SINE Alu 1 282 -30 1328 58 0 35 chr5 85545123 85545296 -117540236 - AluY SINE Alu -1 310 144 192 313 170 9 chr5 85546143 85546255 -117539277 + L2 LINE L2 3125 3254 -18 1608 139 45 112 chr5 85546434 85546821 -117538711 + MLT1A1 LTR MaLR 1 454 -3 1454 102 0 0 chr5 85546912 85547099 -117538433 + AluSg/x SINE Alu 110 296 -14 273 253 113 60 chr5 85547104 85547184 -117538348 + L1MC4a LINE L1 5740 5814 -1994 1224 168 23 0 chr5 85547184 85547398 -117538134 - MER20 DNA MER1_type 0 219 1 273 253 113 60 chr5 85547398 85547467 -117538065 + L1MC4a LINE L1 5814 5897 -1911 2111 121 6 10 chr5 85547646 85547959 -117537573 - AluSq SINE Alu -1 312 1 2360 98 3 0 chr5 85549151 85549457 -117536075 - AluY SINE Alu -4 307 1 1702 168 171 16 chr5 85550414 85550788 -117534744 + MSTB1 LTR MaLR 1 432 0 20514 50 0 1 chr5 85550903 85554273 -117531259 + L1PA6 LINE L1 2778 6154 0 2098 115 21 48 chr5 85554685 85555059 -117530473 - THE1B LTR MaLR 0 364 1 12253 86 3 1 chr5 85555059 85556635 -117528897 - THE1B-int LTR MaLR 0 1580 1 2291 107 51 23 chr5 85556635 85556989 -117528543 - THE1B LTR MaLR 0 364 1 43528 35 22 1 chr5 85557325 85563348 -117522184 + L1PA2 LINE L1 2 6155 0 620 291 90 69 chr5 85563751 85563897 -117521635 + HAL1b LINE L1 61 202 -1146 2784 10 0 0 chr5 85563897 85564193 -117521339 - AluYa5 SINE Alu -15 296 1 620 291 90 69 chr5 85564193 85564716 -117520816 + HAL1b LINE L1 202 744 -604 22 35 0 0 chr5 85564950 85564979 -117520553 + AT_rich Low_complexity Low_complexity 1 29 0 232 171 0 71 chr5 85564987 85565057 -117520475 + A-rich Low_complexity Low_complexity 4 68 0 537 181 52 107 chr5 85565119 85565227 -117520305 + L1M4 LINE L1 2655 2767 -3379 1782 170 0 27 chr5 85565227 85565521 -117520011 + AluJo SINE Alu 3 288 -24 537 181 52 107 chr5 85565521 85565682 -117519850 + L1M4 LINE L1 2767 2909 -3237 21 0 0 0 chr5 85565815 85565836 -117519696 + AT_rich Low_complexity Low_complexity 1 21 0 226 260 27 14 chr5 85565921 85565994 -117519538 + L1P LINE L1 2297 2370 -3776 25 31 0 0 chr5 85566041 85566073 -117519459 + AT_rich Low_complexity Low_complexity 1 32 0 2100 143 0 0 chr5 85566073 85566366 -117519166 - AluSx SINE Alu -19 293 1 386 335 84 13 chr5 85566376 85566603 -117518929 + HAL1b LINE L1 526 768 -580 3636 232 87 36 chr5 85566765 85567130 -117518402 + L1MEc LINE L1 37 382 -6014 1901 158 33 27 chr5 85567130 85567465 -117518067 + MER1B DNA MER1_type 1 337 0 3636 232 87 36 chr5 85567465 85567781 -117517751 + L1MEc LINE L1 382 680 -5716 2198 106 0 0 chr5 85567781 85568087 -117517445 - AluSx SINE Alu 0 306 1 3636 232 87 36 chr5 85568087 85568541 -117516991 + L1MEc LINE L1 680 1232 -5164 2319 108 0 0 chr5 85569256 85569552 -117515980 - AluJo SINE Alu -16 296 1 27 0 0 0 chr5 85569570 85569597 -117515935 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr5 85570361 85570390 -117515142 + AT_rich Low_complexity Low_complexity 1 29 0 1975 182 0 0 chr5 85571348 85571656 -117513876 + AluSx SINE Alu 1 308 -4 301 262 148 55 chr5 85571912 85572168 -117513364 + L1ME4a LINE L1 5315 5594 -2214 4495 134 23 3 chr5 85572182 85572822 -117512710 - MER39B LTR ERV1 0 653 1 332 221 139 0 chr5 85573106 85573174 -117512358 + L1ME4a LINE L1 5964 6021 -100 2456 94 0 0 chr5 85573174 85573482 -117512050 - AluSx SINE Alu -4 308 1 332 221 139 0 chr5 85573482 85573535 -117511997 + L1ME4a LINE L1 6021 6102 -19 24 96 0 0 chr5 85574281 85574354 -117511178 + AT_rich Low_complexity Low_complexity 1 73 0 390 286 2 8 chr5 85574416 85574624 -117510908 - Charlie8 DNA MER1_type 0 2417 140 687 207 77 40 chr5 85574628 85574759 -117510773 - L1MC4 LINE L1 -1 8041 7897 219 69 0 0 chr5 85574759 85574788 -117510744 + (CA)n Simple_repeat Simple_repeat 2 30 0 687 207 77 40 chr5 85574788 85574878 -117510654 - L1MC4 LINE L1 -145 7897 7812 431 153 117 9 chr5 85575056 85575167 -117510365 - Charlie7 DNA MER1_type -59 2553 2431 326 235 69 20 chr5 85575160 85575262 -117510270 - Charlie7 DNA MER1_type -2505 107 1 * 566 279 27 45 chr5 85575361 85575583 -117509949 + L2 LINE L2 3095 3312 -1 26 0 0 0 chr5 85575801 85575827 -117509705 + AT_rich Low_complexity Low_complexity 1 26 0 368 311 71 44 chr5 85577367 85577495 -117508037 + MIR SINE MIR 25 163 -99 2136 159 99 26 chr5 85577495 85577917 -117507615 - MSTB2 LTR MaLR -4 453 1 368 311 71 44 chr5 85577917 85578013 -117507519 + MIR SINE MIR 163 255 -7 1122 164 0 0 chr5 85580650 85580821 -117504711 - AluJb SINE Alu -13 299 129 261 272 104 90 chr5 85580990 85581269 -117504263 + L2 LINE L2 2686 2968 -346 222 297 148 20 chr5 85581414 85581515 -117504017 + L2 LINE L2 3179 3292 -21 358 321 18 0 chr5 85581849 85581958 -117503574 - L2 LINE L2 0 3313 3203 378 190 51 0 chr5 85582347 85582426 -117503106 + MIR SINE MIR 84 166 -96 2182 132 0 0 chr5 85582644 85582954 -117502578 - AluSx SINE Alu -2 310 1 2493 135 8 27 chr5 85583355 85583726 -117501806 + THE1B LTR MaLR 1 364 0 186 71 0 0 chr5 85585434 85585462 -117500070 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 766 214 131 0 chr5 85587170 85587399 -117498133 - MER20B DNA MER1_type -6 777 519 882 224 56 52 chr5 85587494 85587726 -117497806 - MER20B DNA MER1_type -459 324 92 30 27 0 0 chr5 85588165 85588202 -117497330 + AT_rich Low_complexity Low_complexity 1 37 0 1253 210 58 46 chr5 85588300 85588384 -117497148 + L1M4 LINE L1 3427 3509 -2637 2102 97 7 0 chr5 85588384 85588684 -117496848 + AluSx SINE Alu 1 302 0 1253 210 58 46 chr5 85588684 85588946 -117496586 + L1M4 LINE L1 3509 3778 -2368 759 148 8 181 chr5 85588964 85589201 -117496331 - MLT1E2 LTR MaLR -30 475 280 6397 195 25 19 chr5 85589201 85591105 -117494427 - L1M1 LINE L1 -4065 1263 12 805 170 116 132 chr5 85591106 85591156 -117494376 - MLT1E2 LTR MaLR -313 313 264 2291 68 7 26 chr5 85591156 85591465 -117494067 + AluY SINE Alu 1 303 -8 805 170 116 132 chr5 85591465 85591732 -117493800 - MLT1E2 LTR MaLR -362 264 1 405 214 0 0 chr5 85591768 85591852 -117493680 + L1M4 LINE L1 4682 4765 -1381 512 252 39 58 chr5 85591856 85592062 -117493470 + L1M4 LINE L1 4803 5004 -1142 4555 165 15 39 chr5 85592062 85592361 -117493171 + L1MB7 LINE L1 5281 5585 -599 1736 201 87 11 chr5 85592361 85592729 -117492803 - MSTD LTR MaLR 0 396 1 4555 165 15 39 chr5 85592729 85593338 -117492194 + L1MB7 LINE L1 5585 6168 -16 318 208 104 10 chr5 85593361 85593457 -117492075 + L1M4 LINE L1 4992 5096 -1050 1981 233 47 12 chr5 85594255 85594766 -117490766 - L1ME1 LINE L1 -17 6149 5621 1731 217 46 83 chr5 85594762 85595076 -117490456 - L1MDb LINE L1 -4795 1611 1287 * 2223 125 0 6 chr5 85595076 85595388 -117490144 - AluSx SINE Alu -2 310 1 1731 217 46 83 chr5 85595388 85596001 -117489531 - L1MDb LINE L1 -5119 1287 748 345 296 95 82 chr5 85596010 85596314 -117489218 - L1MDb LINE L1 -5573 823 516 207 100 0 0 chr5 85596314 85596344 -117489188 + (A)n Simple_repeat Simple_repeat 1 30 0 1147 163 4 73 chr5 85596517 85596763 -117488769 + AluJo SINE Alu 84 312 0 398 65 290 0 chr5 85597038 85597100 -117488432 - MADE1 DNA Mariner 0 80 1 216 295 126 11 chr5 85597330 85597425 -117488107 - L2 LINE L2 -3 3269 3164 21 0 0 0 chr5 85598020 85598041 -117487491 + AT_rich Low_complexity Low_complexity 1 21 0 3839 204 22 51 chr5 85599764 85600762 -117484770 + LTR5 LTR ERVK 1 969 0 828 200 82 0 chr5 85601169 85601339 -117484193 - MER5A DNA MER1_type -5 184 1 214 175 25 0 chr5 85601682 85601722 -117483810 + MER5B DNA MER1_type 1 41 -137 2174 90 0 0 chr5 85601724 85602002 -117483530 + AluSx SINE Alu 35 312 0 246 347 31 0 chr5 85602206 85602304 -117483228 - MIR SINE MIR -78 130 30 2553 36 7 3 chr5 85603520 85603823 -117481709 - AluY SINE Alu -7 304 1 1798 193 0 7 chr5 85604362 85604662 -117480870 - AluJo SINE Alu -13 299 2 23 78 0 0 chr5 85604668 85604719 -117480813 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr5 85604820 85604842 -117480690 + AT_rich Low_complexity Low_complexity 1 22 0 1662 141 58 4 chr5 85605084 85605360 -117480172 - AluSx SINE Alu -21 291 1 2281 125 49 0 chr5 85605959 85606303 -117479229 - MER46B DNA MER2_type 0 236 1 621 239 146 50 chr5 85607200 85607522 -117478010 - L2 LINE L2 -31 3282 2930 2009 145 0 0 chr5 85607839 85608149 -117477383 - AluSx SINE Alu 0 310 1 581 178 93 0 chr5 85608740 85608858 -117476674 - L1MC3 LINE L1 -6 7779 7651 204 158 0 0 chr5 85608886 85608924 -117476608 + (CA)n Simple_repeat Simple_repeat 1 38 0 2203 75 0 34 chr5 85609799 85610137 -117475395 - AluSg SINE Alu 0 328 1 1013 101 16 0 chr5 85610598 85610727 -117474805 + FLAM_C SINE Alu 1 131 -2 1086 260 240 36 chr5 85610987 85611603 -117473929 + L2 LINE L2 166 907 -2407 918 103 100 184 chr5 85611605 85611926 -117473606 + MER33 DNA MER1_type 1 294 -30 861 180 11 28 chr5 85611926 85612104 -117473428 + L1 LINE L1 2762 2936 -3210 6298 144 42 17 chr5 85612122 85613143 -117472389 + L1M1 LINE L1 161 1207 -6358 912 73 0 0 chr5 85613146 85613256 -117472276 - AluSc SINE Alu -197 112 3 330 309 17 51 chr5 85613380 85613555 -117471977 - LTR16C LTR ERVL -35 456 288 653 293 59 24 chr5 85614477 85614730 -117470802 - MIR SINE MIR 0 262 1 516 204 155 7 chr5 85616813 85616955 -117468577 + MARNA DNA Mariner 65 227 -359 1585 151 27 51 chr5 85617129 85617228 -117468304 - MER33 DNA MER1_type -2261 324 224 1780 126 71 4 chr5 85617228 85617497 -117468035 - AluJb SINE Alu -22 290 4 1585 151 27 51 chr5 85617497 85617729 -117467803 - MER33 DNA MER1_type -2361 224 1 2417 87 3 3 chr5 85618642 85618952 -117466580 - AluSx SINE Alu -2 310 1 2049 129 0 7 chr5 85619845 85620148 -117465384 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr5 85621102 85621137 -117464395 + AT_rich Low_complexity Low_complexity 1 35 0 2149 108 71 8 chr5 85622070 85622423 -117463109 + THE1C LTR MaLR 1 375 0 279 277 79 20 chr5 85622747 85622848 -117462684 + MIR3 SINE MIR 102 208 0 651 275 122 18 chr5 85622904 85623133 -117462399 + MIR SINE MIR 10 262 0 778 249 79 51 chr5 85624060 85624453 -117461079 + MLT1E2 LTR MaLR 14 417 -209 1871 134 0 21 chr5 85624879 85625162 -117460370 + AluSx SINE Alu 36 312 0 30 0 0 0 chr5 85625218 85625248 -117460284 + AT_rich Low_complexity Low_complexity 1 30 0 255 255 11 53 chr5 85625780 85625874 -117459658 + L2 LINE L2 3183 3272 0 465 277 71 0 chr5 85626065 85626206 -117459326 - MIR SINE MIR -82 180 30 252 135 0 0 chr5 85626246 85626283 -117459249 + (TCCCC)n Simple_repeat Simple_repeat 4 40 0 470 216 0 44 chr5 85626283 85626464 -117459068 + CT-rich Low_complexity Low_complexity 3 175 0 2101 122 10 0 chr5 85626466 85626760 -117458772 - AluSx SINE Alu -15 297 1 430 245 11 0 chr5 85627199 85627293 -117458239 + MER5A DNA MER1_type 10 104 -85 2223 124 7 0 chr5 85628813 85629119 -117456413 - AluSg SINE Alu -2 308 1 415 226 36 83 chr5 85629125 85629293 -117456239 - L2 LINE L2 -1 3312 3153 1985 140 0 7 chr5 85629993 85630285 -117455247 - AluSx SINE Alu -22 290 1 339 252 53 38 chr5 85630400 85630531 -117455001 - MLT1E3 LTR MaLR -430 194 62 380 254 53 0 chr5 85630801 85630915 -117454617 + L1M4 LINE L1 3950 4069 -2077 239 159 0 142 chr5 85630933 85631046 -117454486 + L1ME4a LINE L1 5987 6083 -38 1977 142 19 138 chr5 85631498 85632069 -117453463 + MLT1D LTR MaLR 1 503 -2 242 270 84 61 chr5 85633926 85634088 -117451444 - MIR3 SINE MIR -70 138 3 220 231 90 26 chr5 85634457 85634535 -117450997 + MIR3 SINE MIR 114 196 -12 316 220 13 153 chr5 85636859 85637009 -117448523 - L2 LINE L2 -2 3311 3183 2984 174 67 23 chr5 85637038 85637387 -117448145 - L1MB2 LINE L1 -1 6170 5838 435 38 0 0 chr5 85637387 85637440 -117448092 + (TA)n Simple_repeat Simple_repeat 1 53 0 2984 174 67 23 chr5 85637440 85637747 -117447785 - L1MB2 LINE L1 -333 5838 5485 210 71 0 0 chr5 85637747 85637775 -117447757 + (TCCC)n Simple_repeat Simple_repeat 4 31 0 315 295 39 0 chr5 85638547 85638625 -117446907 - MIR3 SINE MIR -7 201 121 2150 120 144 5 chr5 85639536 85639912 -117445620 - MSTA LTR MaLR 0 428 1 1011 196 62 36 chr5 85640321 85640627 -117444905 - MER33 DNA MER1_type -9 315 2 248 277 133 54 chr5 85641835 85642001 -117443531 - MIR3 SINE MIR -25 183 5 290 246 0 0 chr5 85642794 85642851 -117442681 - MIR3 SINE MIR -26 182 126 1759 183 0 13 chr5 85643807 85643926 -117441606 + AluJo SINE Alu 2 121 -191 423 0 0 0 chr5 85643926 85643973 -117441559 + (CTA)n Simple_repeat Simple_repeat 1 47 0 1759 183 0 13 chr5 85643973 85644159 -117441373 + AluJo SINE Alu 121 303 -9 198 0 0 0 chr5 85644909 85644931 -117440601 + (CA)n Simple_repeat Simple_repeat 1 22 0 204 163 0 0 chr5 85645561 85645604 -117439928 + T-rich Low_complexity Low_complexity 1 43 0 837 178 61 6 chr5 85645785 85645948 -117439584 + MER5B DNA MER1_type 7 178 0 650 218 160 0 chr5 85645956 85646112 -117439420 - MER5A DNA MER1_type 0 189 9 634 192 69 8 chr5 85646218 85646348 -117439184 - MER5B DNA MER1_type -1 177 40 4435 171 33 9 chr5 85646353 85647544 -117437988 - L1MB8 LINE L1 -8 6170 4947 9751 153 55 13 chr5 85647558 85649941 -117435591 - L1MA5 LINE L1 -2 7319 4771 1873 179 3 0 chr5 85649941 85650238 -117435294 - AluJb SINE Alu -14 298 1 9751 153 55 13 chr5 85650238 85650849 -117434683 - L1MA5 LINE L1 -2550 4771 4187 235 0 57 0 chr5 85650862 85650897 -117434635 + (TTA)n Simple_repeat Simple_repeat 3 39 0 42296 37 3 2 chr5 85650897 85657026 -117428506 - L1PA3 LINE L1 -18 6137 9 1416 219 39 10 chr5 85657040 85657424 -117428108 - L1MA5 LINE L1 -2987 4180 3786 * 1726 180 17 11 chr5 85657411 85657767 -117427765 - L1MA5 LINE L1 -4101 3067 2710 6010 194 23 5 chr5 85657767 85658887 -117426645 - L1MA5 LINE L1 -6023 1145 6 393 148 0 172 chr5 85658896 85659018 -117426514 - L1M4 LINE L1 -1191 4955 4855 377 264 258 0 chr5 85659704 85659871 -117425661 + MIR SINE MIR 3 212 -50 496 326 163 5 chr5 85660717 85660938 -117424594 - MIR SINE MIR 0 262 7 400 319 52 65 chr5 85661630 85661878 -117423654 - MIR SINE MIR -7 255 11 1933 55 0 0 chr5 85662855 85663112 -117422420 - L1P LINE L1 -3406 2740 2484 21 57 0 0 chr5 85663601 85663636 -117421896 + AT_rich Low_complexity Low_complexity 1 35 0 1455 138 11 33 chr5 85663771 85664046 -117421486 - L1MB8 LINE L1 -1 6177 5909 32 43 0 0 chr5 85664056 85664102 -117421430 + AT_rich Low_complexity Low_complexity 1 46 0 500 310 27 27 chr5 85665124 85665311 -117420221 - MER5A DNA MER1_type -1 188 2 718 222 21 46 chr5 85665461 85665700 -117419832 - L1M4 LINE L1 -1404 4742 4510 2350 127 72 7 chr5 85666037 85666440 -117419092 - MSTB1 LTR MaLR 0 432 4 1648 50 5 10 chr5 85666700 85666901 -117418631 + AluY SINE Alu 102 301 -10 611 244 16 0 chr5 85667230 85667357 -117418175 - MIR SINE MIR -119 143 15 472 208 107 94 chr5 85667422 85667581 -117417951 - MER5B DNA MER1_type -1 177 17 2162 117 3 0 chr5 85668563 85668862 -117416670 + AluSg SINE Alu 1 300 -10 963 101 7 0 chr5 85669847 85669986 -117415546 - LTR24B LTR ERV1 -7 569 430 2318 116 34 28 chr5 85669993 85670424 -117415108 - THE1C LTR MaLR 0 428 1 * 2656 109 26 5 chr5 85670424 85670842 -117414690 - LTR24B LTR ERV1 -149 427 1 474 282 33 66 chr5 85671216 85671457 -117414075 - MER102a DNA MER1_type -3 327 95 368 282 123 25 chr5 85672624 85672787 -117412745 + MIR SINE MIR 84 262 0 4275 168 63 21 chr5 85672878 85673823 -117411709 - L1MB8 LINE L1 0 6178 5199 2258 100 0 0 chr5 85674620 85674910 -117410622 + AluSx SINE Alu 1 290 -22 899 272 97 27 chr5 85675021 85675495 -117410037 - HAL1 LINE L1 -1006 1501 995 208 175 0 25 chr5 85675533 85675573 -117409959 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 298 232 137 101 chr5 85675623 85675791 -117409741 - HAL1 LINE L1 -1592 915 742 703 260 68 18 chr5 85675912 85676139 -117409393 - MIR SINE MIR -12 250 15 1988 138 0 0 chr5 85676788 85677097 -117408435 + AluJb SINE Alu 1 309 0 472 281 64 19 chr5 85677339 85677606 -117407926 - L1M4 LINE L1 -2291 3855 3577 4451 164 8 11 chr5 85777630 85778430 -117307102 - L1MB8 LINE L1 -983 5163 4367 518 135 22 22 chr5 85778430 85778519 -117307013 - U3 snRNA snRNA -128 89 1 1094 261 74 5 chr5 85778623 85779002 -117306530 + L1MC4a LINE L1 5548 5952 -1856 1701 164 24 17 chr5 85780595 85780909 -117304623 + AluJo SINE Alu 1 312 0 351 244 0 0 chr5 85781775 85781857 -117303675 + L2 LINE L2 1783 1864 -1450 975 146 178 14 chr5 85781876 85782089 -117303443 - L1MB2 LINE L1 -1 6170 5923 695 242 32 11 chr5 85782314 85782504 -117303028 + L1MB8 LINE L1 5924 6117 -61 435 218 111 69 chr5 85782667 85782883 -117302649 + L1MC5 LINE L1 7702 7926 -35 198 0 0 0 chr5 85783022 85783044 -117302488 + (A)n Simple_repeat Simple_repeat 1 22 0 2037 131 0 10 chr5 85783044 85783370 -117302162 + AluSx SINE Alu 1 323 0 904 172 184 0 chr5 85784451 85784625 -117300907 + MER3 DNA MER1_type 1 206 -3 186 43 0 0 chr5 85784722 85784745 -117300787 + (CA)n Simple_repeat Simple_repeat 2 24 0 2312 116 0 0 chr5 85785491 85785793 -117299739 - AluSx SINE Alu -10 302 1 229 321 253 23 chr5 85785873 85786138 -117299394 + L3 LINE CR1 1230 1555 -22 2015 67 0 57 chr5 85788320 85788669 -117296863 + AluY SINE Alu 2 333 0 242 337 21 0 chr5 85788749 85788844 -117296688 - MIR SINE MIR -73 135 39 230 313 0 30 chr5 85789562 85789629 -117295903 - L2 LINE L2 -10 3262 3198 311 280 93 111 chr5 85790311 85790654 -117294878 + MLT1I LTR MaLR 71 407 -2 299 308 60 8 chr5 85790818 85790935 -117294597 + L3 LINE CR1 1454 1576 -1 535 242 39 0 chr5 85791519 85791647 -117293885 + MIR SINE MIR 65 197 -65 2514 67 0 19 chr5 85795636 85795950 -117289582 - AluSg SINE Alu -2 308 1 216 327 29 0 chr5 85802390 85802494 -117283038 + GA-rich Low_complexity Low_complexity 2 108 0 243 0 0 0 chr5 85804503 85804530 -117281002 + (TG)n Simple_repeat Simple_repeat 2 28 0 246 95 0 0 chr5 85806240 85806282 -117279250 + (A)n Simple_repeat Simple_repeat 1 42 0 219 69 0 0 chr5 85808105 85808134 -117277398 + (T)n Simple_repeat Simple_repeat 1 29 0 226 159 191 16 chr5 85808482 85808545 -117276987 - MER109 Unknown Unknown -1827 605 532 250 222 74 12 chr5 85808742 85808823 -117276709 + CT-rich Low_complexity Low_complexity 4 89 0 294 220 8 45 chr5 85809049 85809181 -117276351 + C-rich Low_complexity Low_complexity 1 127 0 33 90 0 0 chr5 85809473 85809562 -117275970 + GC_rich Low_complexity Low_complexity 1 89 0 392 248 124 0 chr5 85810252 85810357 -117275175 - L2 LINE L2 -1 3271 3154 333 212 35 12 chr5 85811699 85811784 -117273748 - MLT1J2 LTR MaLR 0 450 364 198 268 158 0 chr5 85811889 85811971 -117273561 - L2 LINE L2 -767 2547 2453 715 215 0 8 chr5 85812004 85812134 -117273398 - FLAM_A SINE Alu -4 129 1 231 246 0 0 chr5 85812137 85812194 -117273338 - L2 LINE L2 -15 3298 3242 1388 222 109 27 chr5 85812994 85813435 -117272097 - MLT1J LTR MaLR -29 482 6 616 289 122 17 chr5 85813949 85814326 -117271206 + MER115 DNA AcHobo 3 464 -229 574 271 63 36 chr5 85814476 85814697 -117270835 + L2 LINE L2 3086 3312 -1 213 364 133 13 chr5 85815120 85815271 -117270261 - MIR3 SINE MIR -7 201 33 303 140 0 0 chr5 85815404 85815454 -117270078 + MIR SINE MIR 131 180 -82 860 76 92 8 chr5 85816578 85816709 -117268823 + L1M1 LINE L1 5455 5596 -709 * 8107 189 27 29 chr5 85816698 85816833 -117268699 - L1 LINE L1 -2264 5301 5167 2075 126 0 17 chr5 85816833 85817126 -117268406 - AluSx SINE Alu -22 290 3 8107 189 27 29 chr5 85817126 85818735 -117266797 - L1 LINE L1 -2398 5167 3560 3575 160 14 2 chr5 85818836 85819399 -117266133 - L1 LINE L1 -6984 581 12 417 283 14 35 chr5 85819441 85819586 -117265946 + L2 LINE L2 3148 3289 -24 2403 130 81 3 chr5 85819590 85819974 -117265558 + MSTB LTR MaLR 1 414 -12 308 136 51 0 chr5 85820024 85820083 -117265449 - MLT1G LTR MaLR -17 573 512 526 256 8 38 chr5 85820093 85820226 -117265306 - MER5B DNA MER1_type -48 130 2 182 294 0 119 chr5 85820288 85820431 -117265101 - MIR SINE MIR -109 153 28 204 135 27 0 chr5 85820601 85820638 -117264894 + (TTG)n Simple_repeat Simple_repeat 2 39 0 347 342 38 22 chr5 85822603 85822787 -117262745 + MIR3 SINE MIR 3 189 -19 1845 121 29 18 chr5 85822998 85823330 -117262202 - AluSq SINE Alu 0 335 1 1842 143 15 0 chr5 85823333 85823671 -117261861 - AluSx SINE Alu 0 348 7 2324 93 7 0 chr5 85823686 85823986 -117261546 - AluSq SINE Alu -11 302 1 268 273 0 0 chr5 85824050 85824116 -117261416 - MIR SINE MIR -14 248 183 361 274 70 95 chr5 85824151 85824592 -117260940 + MLT1J LTR MaLR 1 430 -81 1198 232 50 9 chr5 85825073 85825413 -117260119 + MER74B LTR ERVL 248 601 -21 351 200 158 58 chr5 85825731 85825851 -117259681 - MIR3 SINE MIR -4 204 73 278 291 64 68 chr5 85826058 85826278 -117259254 + HAL1 LINE L1 1 219 -2288 950 269 101 70 chr5 85826368 85827155 -117258377 + HAL1 LINE L1 380 1196 -1311 913 213 118 0 chr5 85827155 85827442 -117258090 - MER33 DNA MER1_type -2 322 2 950 269 101 70 chr5 85827442 85827506 -117258026 + HAL1 LINE L1 1196 1257 -1250 397 286 132 85 chr5 85827511 85827748 -117257784 + HAL1 LINE L1 1745 2004 -503 2282 114 7 0 chr5 85827748 85828055 -117257477 - AluSx SINE Alu -3 309 1 397 286 132 85 chr5 85828055 85828159 -117257373 + HAL1 LINE L1 2004 2102 -405 359 233 93 89 chr5 85828161 85828431 -117257101 + HAL1 LINE L1 2232 2502 -5 202 286 48 36 chr5 85828762 85828803 -117256729 - MIR3 SINE MIR -14 194 153 342 307 16 48 chr5 85828803 85828982 -117256550 + MER5A DNA MER1_type 3 177 -1 697 194 113 97 chr5 85829043 85829229 -117256303 + MER5A DNA MER1_type 1 189 0 1611 98 65 49 chr5 85829316 85829561 -117255971 - AluSg SINE Alu -61 249 1 245 238 30 69 chr5 85829568 85829669 -117255863 - MIR3 SINE MIR -45 163 67 397 165 0 71 chr5 85830071 85830156 -117255376 + L2 LINE L2 3193 3271 -1 443 234 87 33 chr5 85831236 85831420 -117254112 + LTR33A LTR ERVL 234 427 -96 454 323 37 6 chr5 85831661 85831822 -117253710 - MIR SINE MIR -90 172 7 459 310 17 86 chr5 85831904 85832136 -117253396 + L2 LINE L2 3007 3222 -50 507 303 79 33 chr5 85832630 85832996 -117252536 + LTR67 LTR ERVL 101 483 -74 494 258 0 38 chr5 85833003 85833162 -117252370 - L1MA10 LINE L1 -7 6327 6175 311 224 35 43 chr5 85833190 85833306 -117252226 - L1M4 LINE L1 -6103 439 325 266 360 14 20 chr5 85833486 85833633 -117251899 + MLT1K LTR MaLR 153 298 -290 1270 236 66 3 chr5 85833780 85834085 -117251447 - MLT1I LTR MaLR -1 408 85 4340 229 13 57 chr5 85834225 85835423 -117250109 + L1M4 LINE L1 3437 4686 -1460 234 191 95 0 chr5 85835423 85835486 -117250046 - MLT1I LTR MaLR -297 112 44 4340 229 13 57 chr5 85835486 85835583 -117249949 + L1M4 LINE L1 4686 4786 -1360 2257 113 13 0 chr5 85835583 85835884 -117249648 - AluSq SINE Alu -8 305 1 4340 229 13 57 chr5 85835884 85836581 -117248951 + L1M4 LINE L1 4786 5316 -830 6105 122 21 25 chr5 85836583 85837200 -117248332 + L1MC1 LINE L1 5198 5816 -517 2025 155 10 3 chr5 85837200 85837510 -117248022 - AluJo SINE Alu 0 312 1 6105 122 21 25 chr5 85837510 85837838 -117247694 + L1MC1 LINE L1 5816 6140 -193 2154 123 3 0 chr5 85837838 85838131 -117247401 - AluSx SINE Alu -18 294 1 6105 122 21 25 chr5 85838131 85838325 -117247207 + L1MC1 LINE L1 6140 6333 0 281 268 193 11 chr5 85838491 85838756 -117246776 - L1M4 LINE L1 -755 5391 5079 21 36 0 0 chr5 85838766 85838794 -117246738 + AT_rich Low_complexity Low_complexity 1 28 0 2335 91 14 0 chr5 85838802 85839099 -117246433 - AluSx SINE Alu -11 301 1 2080 79 32 54 chr5 85839524 85839840 -117245692 - AluY SINE Alu -2 309 1 629 207 29 119 chr5 85840028 85840242 -117245290 - L1MC5 LINE L1 -61 7900 7739 2651 70 6 11 chr5 85840242 85840597 -117244935 - THE1A LTR MaLR -2 353 1 629 207 29 119 chr5 85840597 85840792 -117244740 - L1MC5 LINE L1 -222 7739 7528 527 170 0 0 chr5 85840834 85840928 -117244604 - L1MC5 LINE L1 -560 7401 7308 2134 123 0 20 chr5 85841130 85841430 -117244102 - AluSx SINE Alu -17 295 2 331 218 59 53 chr5 85841541 85841711 -117243821 - L1P5 LINE L1 -693 5461 5291 2325 89 0 16 chr5 85841769 85842082 -117243450 - AluSg SINE Alu -2 308 1 195 129 0 0 chr5 85842381 85842412 -117243120 + (T)n Simple_repeat Simple_repeat 1 31 0 373 189 123 75 chr5 85842442 85842548 -117242984 - MIR SINE MIR -151 111 1 779 174 0 0 chr5 85842964 85843085 -117242447 - FLAM_C SINE Alu -19 124 4 23 0 0 0 chr5 85843089 85843112 -117242420 + AT_rich Low_complexity Low_complexity 1 23 0 700 320 202 8 chr5 85843311 85843887 -117241645 + L2 LINE L2 2607 3309 -4 2212 69 0 24 chr5 85844211 85844500 -117241032 + AluSg SINE Alu 1 282 -28 357 282 111 68 chr5 85844785 85845136 -117240396 - L1M4 LINE L1 -1249 4897 4532 1393 178 170 17 chr5 85845245 85845650 -117239882 - MLT1C LTR MaLR 0 467 1 240 348 65 0 chr5 85847655 85847747 -117237785 - L2 LINE L2 -1 3312 3215 1987 118 20 3 chr5 85847999 85848296 -117237236 - AluSx SINE Alu -10 302 1 22 0 0 0 chr5 85848485 85848507 -117237025 + AT_rich Low_complexity Low_complexity 1 22 0 2156 96 7 4 chr5 85848888 85849193 -117236339 - AluSx SINE Alu 0 306 1 618 263 26 7 chr5 85849686 85849838 -117235694 - MER63 DNA MER1_type -55 781 1 847 232 0 0 chr5 85850097 85850261 -117235271 - AluJo SINE Alu -25 287 124 23 68 0 0 chr5 85850394 85850438 -117235094 + AT_rich Low_complexity Low_complexity 1 44 0 189 0 0 0 chr5 85851625 85851646 -117233886 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1006 89 8 0 chr5 85851649 85851773 -117233759 - AluSg SINE Alu -184 126 2 2432 85 3 3 chr5 85852706 85853013 -117232519 + AluSp SINE Alu 1 307 -6 271 253 217 0 chr5 85854513 85854596 -117230936 - L2 LINE L2 -4 3268 3168 230 250 120 10 chr5 85854795 85854895 -117230637 + MARNA DNA Mariner 8 118 -468 3443 210 61 95 chr5 85855640 85855827 -117229705 + L1MD2 LINE L1 2512 2704 -3836 1644 185 14 11 chr5 85855827 85856114 -117229418 + AluJo SINE Alu 1 288 -24 3443 210 61 95 chr5 85856114 85857037 -117228495 + L1MD2 LINE L1 2704 3518 -3022 1836 161 33 13 chr5 85857037 85857342 -117228190 + AluJb SINE Alu 1 311 -1 3443 210 61 95 chr5 85857342 85858055 -117227477 + L1MD2 LINE L1 3518 4254 -2286 2144 227 86 38 chr5 85858082 85858942 -117226590 + L1MD2 LINE L1 4658 5558 -982 2183 117 27 0 chr5 85858945 85859245 -117226287 + AluSq SINE Alu 1 308 -5 1082 170 0 0 chr5 85859245 85859416 -117226116 + AluSg/x SINE Alu 132 302 -8 1951 147 40 45 chr5 85859432 85859931 -117225601 + L1MD2 LINE L1 5570 6069 -684 3621 141 44 5 chr5 85859931 85860871 -117224661 + L1PB1 LINE L1 4810 5799 -352 396 0 0 0 chr5 85860871 85860915 -117224617 + (TA)n Simple_repeat Simple_repeat 2 45 0 3621 141 44 5 chr5 85860915 85861010 -117224522 + L1PB1 LINE L1 5799 5889 -262 2526 102 0 5 chr5 85861014 85861386 -117224146 + L1PB1 LINE L1 5782 6151 0 1706 227 141 15 chr5 85861388 85861983 -117223549 + L1MD2 LINE L1 6051 6720 -33 1706 151 3 86 chr5 85862756 85862988 -117222544 - AluJb SINE Alu -3 309 112 1721 128 71 46 chr5 85862988 85863354 -117222178 + THE1C LTR MaLR 1 375 0 1706 151 3 86 chr5 85863354 85863458 -117222074 - AluJb SINE Alu -200 112 1 1500 196 0 14 chr5 85864732 85865012 -117220520 + AluJo SINE Alu 1 276 -36 29 0 0 0 chr5 85865020 85865049 -117220483 + AT_rich Low_complexity Low_complexity 1 29 0 557 285 39 106 chr5 85865494 85865717 -117219815 - L2 LINE L2 -565 2749 2567 2107 127 16 3 chr5 85865717 85866025 -117219507 + AluSx SINE Alu 1 312 0 557 285 39 106 chr5 85866025 85866236 -117219296 - L2 LINE L2 -747 2567 2344 536 255 107 0 chr5 85866355 85866504 -117219028 - L2 LINE L2 -1782 1532 1368 210 318 236 23 chr5 85866545 85866765 -117218767 - L2 LINE L2 -181 3091 2825 351 242 0 0 chr5 85866989 85867055 -117218477 + MIR SINE MIR 1 66 -196 862 179 14 7 chr5 85867057 85867226 -117218306 + AluJb SINE Alu 137 306 0 340 231 77 0 chr5 85867226 85867317 -117218215 + MIR SINE MIR 60 157 -105 22 35 0 0 chr5 85867598 85867627 -117217905 + AT_rich Low_complexity Low_complexity 1 29 0 2385 71 7 0 chr5 85867759 85868053 -117217479 - AluY SINE Alu -15 296 1 23 0 0 0 chr5 85868167 85868190 -117217342 + AT_rich Low_complexity Low_complexity 1 23 0 228 211 13 79 chr5 85868323 85868399 -117217133 - L2 LINE L2 -6 3307 3237 2938 178 53 11 chr5 85868725 85869371 -117216161 + L1MB8 LINE L1 5500 6172 -6 28 91 0 0 chr5 85869490 85869567 -117215965 + AT_rich Low_complexity Low_complexity 1 77 0 531 240 93 81 chr5 85869637 85869970 -117215562 + MER102b DNA MER1_type 1 337 -4 184 170 38 0 chr5 85869995 85870048 -117215484 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1509 185 71 19 chr5 85870212 85870536 -117214996 + MER58B DNA MER1_type 1 341 0 207 111 111 0 chr5 85870682 85870718 -117214814 + L2 LINE L2 3232 3271 -1 298 274 41 0 chr5 85870840 85870913 -117214619 + Charlie6 DNA MER1_type 638 713 -2787 * 1795 183 56 17 chr5 85870911 85871320 -117214212 + Charlie6 DNA MER1_type 831 1255 -2245 401 286 86 9 chr5 85871340 85871550 -117213982 - L1ME LINE L1 -563 5599 5374 33 25 0 0 chr5 85871736 85871776 -117213756 + AT_rich Low_complexity Low_complexity 1 40 0 833 261 88 10 chr5 85871806 85872101 -117213431 + MER46C DNA MER2_type 21 338 0 32 44 0 29 chr5 85872155 85872190 -117213342 + AT_rich Low_complexity Low_complexity 1 35 -31 1744 188 7 7 chr5 85872190 85872478 -117213054 + AluJo SINE Alu 1 288 -24 32 44 0 29 chr5 85872478 85872510 -117213022 + AT_rich Low_complexity Low_complexity 35 66 0 391 267 110 14 chr5 85872523 85872669 -117212863 - L1ME4a LINE L1 -268 5853 5694 421 288 56 69 chr5 85873097 85873224 -117212308 + HAL1 LINE L1 1296 1423 -1084 2150 99 3 7 chr5 85873224 85873517 -117212015 + AluSx SINE Alu 10 301 -11 421 288 56 69 chr5 85873517 85873695 -117211837 + HAL1 LINE L1 1423 1597 -910 2319 87 0 0 chr5 85873736 85874048 -117211484 - AluY SINE Alu 0 312 1 842 266 140 0 chr5 85874048 85874341 -117211191 - L2 LINE L2 -12 3301 2968 310 299 94 8 chr5 85874361 85874478 -117211054 + HAL1 LINE L1 1636 1762 -745 445 289 53 21 chr5 85875670 85875860 -117209672 - MIR SINE MIR -2 260 65 837 281 110 22 chr5 85875944 85876464 -117209068 + MLT1L LTR MaLR 5 613 -2 2195 110 0 7 chr5 85876730 85877030 -117208502 + AluSq SINE Alu 1 298 -15 2158 103 3 3 chr5 85877030 85877331 -117208201 + AluSp SINE Alu 1 301 -12 290 272 72 40 chr5 85877970 85878095 -117207437 + L2 LINE L2 2929 3057 -215 197 286 20 82 chr5 85878294 85878392 -117207140 - MIR SINE MIR -81 181 90 22 0 0 0 chr5 85878790 85878812 -117206720 + AT_rich Low_complexity Low_complexity 1 22 0 277 299 107 43 chr5 85879128 85879315 -117206217 + L2 LINE L2 2193 2391 -923 317 251 59 128 chr5 85879487 85879614 -117205918 + L3 LINE CR1 851 960 -617 2264 98 3 0 chr5 85879614 85879910 -117205622 + AluSx SINE Alu 1 297 -15 317 251 59 128 chr5 85879910 85879985 -117205547 + L3 LINE CR1 960 1039 -538 385 243 99 0 chr5 85881626 85881737 -117203795 - MER103 DNA DNA -43 123 2 35 24 0 0 chr5 85881913 85881955 -117203577 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 85882356 85882385 -117203147 + AT_rich Low_complexity Low_complexity 1 29 0 1003 116 0 0 chr5 85886207 85886354 -117199178 + AluSg/x SINE Alu 164 310 -2 186 362 0 14 chr5 85886382 85886451 -117199081 - MIR SINE MIR -125 83 16 29 0 0 0 chr5 85887758 85887787 -117197745 + AT_rich Low_complexity Low_complexity 1 29 0 2112 119 0 0 chr5 85888133 85888411 -117197121 + AluSx SINE Alu 13 290 -22 1452 204 127 19 chr5 85889214 85889631 -117195901 + MLT1C LTR MaLR 6 467 0 258 105 0 0 chr5 85889793 85889831 -117195701 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 703 285 111 8 chr5 85889988 85890374 -117195158 - L1ME LINE L1 -301 5820 5395 669 256 122 6 chr5 85890389 85890561 -117194971 + MIR SINE MIR 32 223 -39 228 322 12 18 chr5 85890604 85890775 -117194757 - L1ME LINE L1 -782 5364 5195 23 33 0 0 chr5 85890819 85890849 -117194683 + AT_rich Low_complexity Low_complexity 1 30 0 1652 60 0 0 chr5 85891466 85891667 -117193865 + AluY SINE Alu 108 308 -3 14316 123 44 11 chr5 85891667 85892088 -117193444 + Tigger1 DNA MER2_type 66 472 -1946 2107 135 3 0 chr5 85892088 85892384 -117193148 + AluSx SINE Alu 1 297 -15 14316 123 44 11 chr5 85892384 85894240 -117191292 + Tigger1 DNA MER2_type 472 2418 0 186 43 0 0 chr5 85894955 85894978 -117190554 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2452 73 0 7 chr5 85895141 85895444 -117190088 + AluY SINE Alu 1 301 -10 194 361 34 63 chr5 85895606 85895844 -117189688 + L2 LINE L2 2830 3060 -212 496 294 35 14 chr5 85896588 85896731 -117188801 + MIR3 SINE MIR 39 184 -24 414 300 62 0 chr5 85897406 85897536 -117187996 + MIR SINE MIR 45 182 -80 2306 99 0 0 chr5 85897674 85897968 -117187564 - AluSx SINE Alu -18 294 1 653 204 30 117 chr5 85897997 85898261 -117187271 - MER112 DNA MER1_type -12 248 8 1948 144 14 0 chr5 85898264 85898555 -117186977 + AluSx SINE Alu 1 295 -17 645 325 180 26 chr5 85899162 85899886 -117185646 - L2 LINE L2 -339 2975 2141 383 354 9 0 chr5 85899914 85900027 -117185505 + L2 LINE L2 3157 3270 -2 1105 143 65 43 chr5 85901175 85901405 -117184127 - MER46A DNA MER2_type -1 235 1 291 270 51 73 chr5 85902298 85902404 -117183128 + MIR SINE MIR 6 110 -152 990 308 44 24 chr5 85902404 85902859 -117182673 - LTR16B LTR ERVL 0 464 1 291 270 51 73 chr5 85902859 85902889 -117182643 + MIR SINE MIR 110 139 -123 468 283 0 0 chr5 85902922 85903014 -117182518 - L2 LINE L2 -38 3234 3143 795 173 32 49 chr5 85903327 85903512 -117182020 + MER20 DNA MER1_type 34 215 -4 2432 88 3 0 chr5 85903617 85903925 -117181607 - AluSx SINE Alu -3 309 1 633 228 90 32 chr5 85904019 85904208 -117181324 + MIR SINE MIR 52 251 -11 212 328 0 16 chr5 85904770 85904831 -117180701 + L2 LINE L2 3250 3309 -4 719 186 0 0 chr5 85905238 85905367 -117180165 + FLAM_C SINE Alu 3 131 -2 26 0 0 0 chr5 85905367 85905393 -117180139 + AT_rich Low_complexity Low_complexity 1 26 0 232 267 67 67 chr5 85907370 85907460 -117178072 + MIR SINE MIR 57 146 -116 1368 161 44 8 chr5 85907743 85907992 -117177540 - Tigger2 DNA MER2_type 0 2718 2461 3006 132 102 26 chr5 85908056 85908623 -117176909 - Tigger2 DNA MER2_type -1972 746 137 730 276 46 37 chr5 85908685 85909008 -117176524 + L1MC4a LINE L1 5527 5852 -1956 280 200 12 38 chr5 85909250 85909330 -117176202 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 29 0 0 0 chr5 85909349 85909378 -117176154 + AT_rich Low_complexity Low_complexity 1 29 0 3064 117 81 49 chr5 85909757 85910242 -117175290 - MER4B LTR ERV1 0 610 101 2146 89 15 52 chr5 85910242 85910567 -117174965 - AluSq SINE Alu 0 313 1 3064 117 81 49 chr5 85910567 85910672 -117174860 - MER4B LTR ERV1 -509 101 1 399 41 0 0 chr5 85910692 85910741 -117174791 - MER4B-int LTR ERV1 -24 6734 6686 2524 78 6 9 chr5 85910742 85911073 -117174459 - LTR8 LTR ERV1 0 691 362 2241 116 33 0 chr5 85911078 85911407 -117174125 - MER4B-int LTR ERV1 -2973 3785 3446 267 61 0 0 chr5 85911411 85911460 -117174072 - MER4B-int LTR ERV1 -3664 3094 3046 14229 124 78 48 chr5 85911487 85911516 -117174016 - MER4B-int LTR ERV1 -3664 3094 3067 1502 143 0 29 chr5 85911516 85911621 -117173911 - AluSx SINE Alu -75 237 131 261 0 0 0 chr5 85911621 85911650 -117173882 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2746 3 0 0 chr5 85911652 85911947 -117173585 - AluYb8 SINE Alu -23 295 1 1502 143 0 29 chr5 85911947 85912082 -117173450 - AluSx SINE Alu -182 130 1 14229 124 78 48 chr5 85912082 85912875 -117172657 - MER4B-int LTR ERV1 -3691 3067 2299 1995 122 11 0 chr5 85912875 85913145 -117172387 - AluSx SINE Alu -39 273 1 14229 124 78 48 chr5 85913145 85914386 -117171146 - MER4B-int LTR ERV1 -4459 2299 1097 2130 106 14 3 chr5 85914386 85914679 -117170853 + AluSg SINE Alu 1 296 -14 14229 124 78 48 chr5 85914679 85914812 -117170720 - MER4B-int LTR ERV1 -5661 1097 969 2005 139 3 3 chr5 85914812 85915122 -117170410 + AluSp SINE Alu 1 310 -3 14229 124 78 48 chr5 85915122 85915739 -117169793 - MER4B-int LTR ERV1 -5789 969 193 1329 224 87 12 chr5 85915763 85916098 -117169434 - MER4A-int LTR ERV1 -4127 2204 1845 2696 113 208 40 chr5 85916132 85916796 -117168736 - MER4A-int LTR ERV1 -5757 841 1 1150 127 0 0 chr5 85916800 85916958 -117168574 - MER4A LTR ERV1 -2 662 505 2534 187 79 45 chr5 85916964 85917242 -117168290 - MER50 LTR ERV1 -7 727 460 3495 67 58 2 chr5 85917242 85917706 -117167826 + LTR2B LTR ERV1 1 490 0 2534 187 79 45 chr5 85917706 85918048 -117167484 - MER50 LTR ERV1 -274 460 86 711 192 17 41 chr5 85918042 85918214 -117167318 - MER50 LTR ERV1 -566 168 1 * 2505 112 80 19 chr5 85918214 85918641 -117166891 - MER4B LTR ERV1 -156 454 2 5327 95 41 37 chr5 85919485 85920741 -117164791 + SVA Other Other 4 1380 -6 282 338 122 32 chr5 85920795 85921106 -117164426 - MLT1K LTR MaLR -72 516 178 2421 35 0 3 chr5 85922051 85922370 -117163162 + AluY SINE Alu 1 318 0 386 219 81 32 chr5 85922416 85922539 -117162993 + L1ME3A LINE L1 5457 5585 -579 1554 175 67 81 chr5 85922547 85922919 -117162613 + MLT1A1 LTR MaLR 8 365 0 673 264 70 12 chr5 85922929 85923187 -117162345 + L1ME3A LINE L1 5596 5868 -302 21 0 0 0 chr5 85923271 85923292 -117162240 + AT_rich Low_complexity Low_complexity 1 21 0 1890 155 44 55 chr5 85923988 85924445 -117161087 - Charlie1b DNA MER1_type -61 462 11 416 235 172 31 chr5 85924593 85924792 -117160740 + L2 LINE L2 2773 2997 -316 195 42 0 0 chr5 85924971 85924995 -117160537 + (A)n Simple_repeat Simple_repeat 1 24 0 180 0 0 0 chr5 85925221 85925241 -117160291 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2194 30 45 0 chr5 85925582 85925886 -117159646 - AluY SINE Alu 0 316 1 1621 194 30 30 chr5 85926929 85927294 -117158238 + MLT1A1 LTR MaLR 1 365 0 715 254 24 43 chr5 85927322 85927545 -117157987 - MIR SINE MIR -10 252 34 627 164 9 27 chr5 85929539 85929649 -117155883 - MER81 DNA DNA -3 111 4 1765 136 56 3 chr5 85929943 85930230 -117155302 + AluSx SINE Alu 1 302 -10 310 113 145 0 chr5 85930312 85930374 -117155158 + L1MA5 LINE L1 6228 6298 -2 767 93 0 0 chr5 85931447 85931590 -117153942 + L1PA8 LINE L1 6042 6184 0 370 232 9 105 chr5 85932371 85932497 -117153035 + MIR SINE MIR 44 157 -63 * 485 327 111 18 chr5 85932496 85932722 -117152810 - MIR SINE MIR -4 258 12 4188 140 59 20 chr5 85933052 85933906 -117151626 + MER4D LTR ERV1 1 664 0 3876 93 22 96 chr5 85933946 85934663 -117150869 + MER4A LTR ERV1 1 664 0 303 287 65 96 chr5 85934976 85935237 -117150295 + L1M2 LINE L1 1174 1426 -5423 197 292 21 0 chr5 85936137 85936185 -117149347 + L2 LINE L2 3251 3299 -14 1918 100 48 52 chr5 85936313 85936622 -117148910 - AluSx SINE Alu 0 312 5 297 89 0 0 chr5 85937162 85937207 -117148325 + (CA)n Simple_repeat Simple_repeat 2 46 0 330 135 27 68 chr5 85937614 85937653 -117147879 + Tigger2 DNA MER2_type 1 37 -2681 3588 149 17 20 chr5 85937653 85938290 -117147242 + MER41B LTR ERV1 1 635 0 330 135 27 68 chr5 85938290 85938324 -117147208 + Tigger2 DNA MER2_type 37 71 -2647 609 246 28 50 chr5 85938359 85938538 -117146994 - MER8 DNA MER2_type -62 177 3 922 211 134 5 chr5 85938635 85938844 -117146688 + MIR SINE MIR 3 238 -24 2822 93 2 132 chr5 85938854 85939101 -117146431 + MER4B LTR ERV1 1 278 -501 2261 102 10 0 chr5 85939101 85939405 -117146127 + AluSp SINE Alu 1 307 -6 2822 93 2 132 chr5 85939405 85939853 -117145679 + MER4B LTR ERV1 278 779 0 361 209 81 12 chr5 85940024 85940110 -117145422 + L2 LINE L2 3174 3265 -7 2299 128 62 28 chr5 85940662 85940898 -117144634 - Tigger2 DNA MER2_type 0 2718 2459 2282 119 0 0 chr5 85940898 85941201 -117144331 + AluSx SINE Alu 1 303 -9 2299 128 62 28 chr5 85941201 85941401 -117144131 - Tigger2 DNA MER2_type -259 2459 2267 465 132 0 0 chr5 85941386 85941454 -117144078 - Tigger2 DNA MER2_type -2650 68 1 * 318 375 36 0 chr5 85941558 85941670 -117143862 + L2 LINE L2 3141 3256 -16 639 252 40 25 chr5 85942383 85942600 -117142932 + HERVL LTR ERVL 3006 3229 -1905 1832 229 93 24 chr5 85942937 85943444 -117142088 + MLT1F LTR MaLR 1 542 0 628 193 62 0 chr5 85943505 85943650 -117141882 + L1ME LINE L1 5582 5735 -435 487 232 4 69 chr5 85943660 85943893 -117141639 - L1MEc LINE L1 -933 5607 5390 192 25 100 0 chr5 85945182 85945222 -117140310 + T-rich Low_complexity Low_complexity 1 44 0 1690 149 65 4 chr5 85945772 85946047 -117139485 + AluJb SINE Alu 1 292 -20 2202 112 3 0 chr5 85946113 85946422 -117139110 - AluSp SINE Alu 0 310 1 300 241 62 36 chr5 85946776 85946888 -117138644 + MLT1J LTR MaLR 378 492 -19 22 35 0 0 chr5 85947674 85947703 -117137829 + AT_rich Low_complexity Low_complexity 1 29 0 28 61 0 0 chr5 85947890 85947939 -117137593 + AT_rich Low_complexity Low_complexity 1 49 0 218 155 35 35 chr5 85948196 85948254 -117137278 + (TTA)n Simple_repeat Simple_repeat 2 59 0 1985 161 3 0 chr5 85948455 85948754 -117136778 + AluJb SINE Alu 1 300 -12 1728 173 0 33 chr5 85948844 85949151 -117136381 - AluJo SINE Alu -15 297 1 251 346 28 9 chr5 85949259 85949366 -117136166 + MIR SINE MIR 154 262 0 186 211 26 0 chr5 85949683 85949721 -117135811 + MIR SINE MIR 75 113 -149 28 29 0 0 chr5 85949860 85949895 -117135637 + AT_rich Low_complexity Low_complexity 1 35 0 903 151 29 0 chr5 85950238 85950377 -117135155 + FLAM_C SINE Alu 1 143 0 380 214 36 0 chr5 85950962 85951046 -117134486 - Tigger2 DNA MER2_type -10 2708 2622 233 208 0 0 chr5 85951047 85951095 -117134437 - MLT1J LTR MaLR -463 48 1 4437 226 55 20 chr5 85951214 85952219 -117133313 - L1MEc LINE L1 -1376 5164 4195 1993 148 4 0 chr5 85952219 85952496 -117133036 - AluSx SINE Alu -32 280 3 4437 226 55 20 chr5 85952496 85952628 -117132904 - L1MEc LINE L1 -2345 4195 4069 210 37 0 0 chr5 85952628 85952655 -117132877 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4437 226 55 20 chr5 85952655 85952983 -117132549 - L1MEc LINE L1 -2471 4069 3648 454 280 9 47 chr5 85952981 85953004 -117132528 - L1MD2 LINE L1 -339 6020 5998 * 234 0 0 0 chr5 85953004 85953030 -117132502 + (TG)n Simple_repeat Simple_repeat 2 27 0 454 280 9 47 chr5 85953030 85953217 -117132315 - L1MD2 LINE L1 -361 5998 5818 258 248 62 69 chr5 85953109 85953236 -117132296 - L1PB4 LINE L1 -231 5925 5798 * 270 0 0 0 chr5 85953236 85953266 -117132266 + (CA)n Simple_repeat Simple_repeat 2 31 0 258 248 62 69 chr5 85953266 85953283 -117132249 - L1PB4 LINE L1 -358 5798 5782 6584 35 2 20 chr5 85953393 85954197 -117131335 - SVA Other Other 0 1386 597 2496 138 66 31 chr5 85954214 85954700 -117130832 - L1MB5 LINE L1 -10 6164 5662 3316 205 46 63 chr5 85954705 85956174 -117129358 - L1MEc LINE L1 -2875 3665 2214 704 233 252 5 chr5 85957479 85958019 -117127513 - LTR50 LTR ERVL -26 769 3 447 238 77 48 chr5 85958653 85958821 -117126711 + MIR SINE MIR 90 262 0 6663 198 25 36 chr5 85958896 85960662 -117124870 + L1MC1 LINE L1 3299 5007 -1326 2085 133 0 0 chr5 85960662 85960955 -117124577 + AluSx SINE Alu 6 298 -14 6663 198 25 36 chr5 85960955 85962268 -117123264 + L1MC1 LINE L1 5007 6333 0 313 239 56 70 chr5 85962509 85962651 -117122881 + L1MEc LINE L1 1420 1559 -4837 303 248 52 19 chr5 85962677 85962833 -117122699 - L1MEc LINE L1 -4654 2015 1739 620 139 337 0 chr5 85963038 85963143 -117122389 - L1MA4A LINE L1 -23 6280 6212 2478 63 0 3 chr5 85963143 85963443 -117122089 - AluY SINE Alu -11 300 2 620 139 337 0 chr5 85963443 85963503 -117122029 - L1MA4A LINE L1 -91 6212 6059 1813 165 3 30 chr5 85963612 85963915 -117121617 + AluJo SINE Alu 1 295 -17 30 77 0 0 chr5 85964032 85964097 -117121435 + AT_rich Low_complexity Low_complexity 1 65 0 4988 132 14 1 chr5 85964212 85965015 -117120517 - L1MA4A LINE L1 -11 6292 5480 1726 159 11 4 chr5 85965053 85965330 -117120202 - AluJb SINE Alu -31 281 3 5957 172 10 41 chr5 85965332 85966320 -117119212 - L1M LINE L1 -840 5306 4391 2146 97 30 7 chr5 85966320 85966618 -117118914 - AluSx SINE Alu -5 307 3 5957 172 10 41 chr5 85966618 85967035 -117118497 - L1M LINE L1 -1755 4391 3963 3850 188 46 11 chr5 85967031 85967967 -117117565 - L1 LINE L1 -3071 3777 2806 * 1062 263 98 24 chr5 85968002 85968493 -117117039 + L1ME3A LINE L1 5425 5951 -219 2676 19 7 3 chr5 85968500 85968810 -117116722 + AluY SINE Alu 1 311 0 248 231 0 0 chr5 85969016 85969068 -117116464 + LTR30 LTR ERV1 1 52 -670 1342 131 42 56 chr5 85969068 85969369 -117116163 + LTR12 LTR ERV1 57 270 -444 319 178 61 19 chr5 85969369 85969475 -117116057 + LTR30 LTR ERV1 553 643 -79 679 142 47 74 chr5 85969475 85969623 -117115909 + pTR5 LTR ERV1 301 444 -1994 * 19421 116 13 14 chr5 85969593 85972693 -117112839 + HERV9 LTR ERV1 43 3139 -5260 599 129 0 0 chr5 85972700 85972793 -117112739 + HERV9 LTR ERV1 4172 4264 -3993 * 694 116 4 6 chr5 85972791 85972912 -117112620 + LTR12 LTR ERV1 374 714 0 644 246 45 0 chr5 85972982 85973161 -117112371 - L1ME LINE L1 -419 5702 5516 279 0 0 0 chr5 85973265 85973296 -117112236 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 387 0 0 0 chr5 85973295 85973338 -117112194 + (TG)n Simple_repeat Simple_repeat 2 44 0 799 246 78 123 chr5 85973701 85974279 -117111253 + MLT1H1 LTR MaLR 2 553 -2 239 370 110 8 chr5 85974440 85974567 -117110965 - L2 LINE L2 -275 3038 2899 3251 140 24 44 chr5 85974952 85975053 -117110479 + L1MC1 LINE L1 5731 5832 -501 1959 171 0 3 chr5 85975053 85975363 -117110169 + AluJb SINE Alu 1 309 -3 3251 140 24 44 chr5 85975363 85975876 -117109656 + L1MC1 LINE L1 5832 6333 0 1303 260 101 14 chr5 85976577 85977004 -117108528 + LTR16B LTR ERVL 1 464 0 313 300 47 13 chr5 85977509 85977659 -117107873 + L1ME LINE L1 5542 5696 -425 215 228 18 0 chr5 85977751 85977808 -117107724 + CT-rich Low_complexity Low_complexity 1 58 0 262 292 180 0 chr5 85978478 85978567 -117106965 - L2 LINE L2 0 3272 3168 24 0 0 0 chr5 85978869 85978893 -117106639 + AT_rich Low_complexity Low_complexity 1 24 0 2108 138 0 0 chr5 85978955 85979253 -117106279 + AluSx SINE Alu 1 298 -14 303 94 16 47 chr5 85981040 85981104 -117104428 + L1MA2 LINE L1 6242 6303 -1 33 0 0 0 chr5 85981117 85981150 -117104382 + AT_rich Low_complexity Low_complexity 1 33 0 365 235 49 20 chr5 85981510 85981612 -117103920 - MER112 DNA MER1_type -155 105 1 2710 99 48 12 chr5 85981692 85982104 -117103428 - MSTA LTR MaLR 0 428 2 2129 106 3 7 chr5 85982278 85982570 -117102962 + AluSx SINE Alu 1 291 -21 314 306 25 56 chr5 85982661 85982821 -117102711 - MIR SINE MIR -74 188 34 323 333 16 24 chr5 85983247 85983370 -117102162 - MIR3 SINE MIR -77 131 10 317 300 0 0 chr5 85985046 85985136 -117100396 - MIR SINE MIR -44 218 129 247 128 0 0 chr5 85985140 85985179 -117100353 - MIR SINE MIR -111 151 113 874 288 136 22 chr5 85985253 85985715 -117099817 + Charlie7 DNA MER1_type 1 515 -2097 600 196 104 26 chr5 85985745 85985975 -117099557 + Charlie7 DNA MER1_type 2322 2569 -43 309 252 80 80 chr5 85986021 85986259 -117099273 - L1ME LINE L1 -410 5711 5474 1339 200 11 14 chr5 85986577 85986852 -117098680 + L1MB8 LINE L1 4927 5200 -946 697 96 7 111 chr5 85986875 85986966 -117098566 + FLAM_A SINE Alu 22 96 -215 2306 94 3 3 chr5 85986966 85987265 -117098267 - AluSq SINE Alu -13 300 2 697 96 7 111 chr5 85987265 85987308 -117098224 + FLAM_A SINE Alu 96 142 -169 225 152 22 0 chr5 85987309 85987355 -117098177 + L1MB8 LINE L1 5195 5241 -905 675 207 0 22 chr5 85987357 85987492 -117098040 - FLAM_C SINE Alu -7 136 5 4972 172 5 20 chr5 85987496 85988460 -117097072 + L1MB8 LINE L1 5229 6176 -2 187 231 0 39 chr5 85989663 85989715 -117095817 - L2 LINE L2 -1 3312 3263 840 278 138 60 chr5 85990502 85990981 -117094551 - MLT1H1 LTR MaLR -8 547 32 319 310 58 29 chr5 85991325 85991496 -117094036 - L1MC/D LINE L1 -2048 5760 5585 259 265 102 0 chr5 85991886 85991984 -117093548 - MER103 DNA DNA -23 143 36 2412 92 0 3 chr5 85993463 85993769 -117091763 + AluSg SINE Alu 1 305 -5 2349 96 3 22 chr5 85994024 85994337 -117091195 + AluSx SINE Alu 1 307 -5 477 258 36 24 chr5 85994975 85995030 -117090502 - MIR3 SINE MIR 0 208 155 945 201 16 16 chr5 85995030 85995219 -117090313 - MER5A DNA MER1_type 0 189 1 477 258 36 24 chr5 85995219 85995330 -117090202 - MIR3 SINE MIR -53 155 40 1247 293 123 9 chr5 85995584 85996477 -117089055 + L2 LINE L2 2308 3307 -6 1844 106 91 7 chr5 85996783 85997057 -117088475 - AluSx SINE Alu -15 297 1 807 154 15 22 chr5 85999173 85999309 -117086223 - AluJo SINE Alu -177 135 1 305 260 167 13 chr5 86001107 86001257 -117084275 + MIR SINE MIR 75 247 -15 2430 67 0 10 chr5 86001814 86002141 -117083391 - AluY SINE Alu 0 311 1 240 59 0 0 chr5 86009095 86009129 -117076403 + (CA)n Simple_repeat Simple_repeat 1 34 0 456 269 31 0 chr5 86010676 86010887 -117074645 + (TG)n Simple_repeat Simple_repeat 1 217 0 22 35 0 0 chr5 86011148 86011177 -117074355 + GC_rich Low_complexity Low_complexity 1 29 0 234 207 0 0 chr5 86011738 86011796 -117073736 + GA-rich Low_complexity Low_complexity 3 60 0 369 0 0 0 chr5 86011994 86012035 -117073497 + (CA)n Simple_repeat Simple_repeat 1 41 0 2236 114 20 0 chr5 86014132 86014438 -117071094 + AluSx SINE Alu 1 312 0 225 385 39 33 chr5 86015048 86015383 -117070149 + L2 LINE L2 2555 2891 -423 1809 58 0 0 chr5 86015492 86015718 -117069814 + L1PA5 LINE L1 5923 6148 -6 21 36 0 0 chr5 86015718 86015746 -117069786 + AT_rich Low_complexity Low_complexity 1 28 0 314 189 129 61 chr5 86015809 86015941 -117069591 - L2 LINE L2 -1 3312 3172 962 164 7 7 chr5 86016487 86016676 -117068856 - AluJb SINE Alu 0 320 132 2346 261 107 68 chr5 86017313 86017695 -117067837 + HAL1 LINE L1 2 367 -2140 2106 116 3 0 chr5 86017695 86018016 -117067516 + AluSq SINE Alu 2 323 0 2346 261 107 68 chr5 86018016 86018920 -117066612 + HAL1 LINE L1 367 1340 -1167 298 291 47 16 chr5 86019339 86019466 -117066066 + MIR3 SINE MIR 30 160 -48 510 267 330 8 chr5 86019466 86019724 -117065808 + MER102b DNA MER1_type 1 341 0 257 310 69 26 chr5 86019765 86019881 -117065651 - L2 LINE L2 0 3313 3193 2445 190 76 6 chr5 86020195 86020732 -117064800 - MER90 LTR ERV1 0 575 1 893 288 264 19 chr5 86021610 86022329 -117063203 - L3 LINE CR1 -70 1507 613 209 273 30 0 chr5 86022332 86022398 -117063134 + CT-rich Low_complexity Low_complexity 1 68 0 284 310 259 3 chr5 86022417 86022714 -117062818 - L3 LINE CR1 -961 616 244 345 339 47 62 chr5 86023409 86023683 -117061849 + L2 LINE L2 3002 3271 -1 310 242 134 65 chr5 86023935 86024121 -117061411 - MIR3 SINE MIR -3 205 7 207 0 0 0 chr5 86026363 86026386 -117059146 + (T)n Simple_repeat Simple_repeat 1 23 0 195 100 0 0 chr5 86027165 86027195 -117058337 + (TG)n Simple_repeat Simple_repeat 1 30 0 2709 36 0 0 chr5 86029701 86030005 -117055527 - AluY SINE Alu -7 304 1 231 215 154 0 chr5 86030025 86030090 -117055442 + MER5A DNA MER1_type 1 75 -114 466 198 110 64 chr5 86030092 86030120 -117055412 + L1MB5 LINE L1 6017 6042 -142 1435 128 13 34 chr5 86030120 86030355 -117055177 + MER30 DNA MER1_type 1 230 0 466 198 110 64 chr5 86030355 86030482 -117055050 + L1MB5 LINE L1 6042 6183 -1 22 0 0 0 chr5 86031457 86031479 -117054053 + AT_rich Low_complexity Low_complexity 1 22 0 1318 146 59 5 chr5 86031490 86031710 -117053822 + L1M3 LINE L1 5587 5818 -353 225 213 0 16 chr5 86031712 86031773 -117053759 + (TA)n Simple_repeat Simple_repeat 2 61 0 30 27 0 0 chr5 86032037 86032074 -117053458 + AT_rich Low_complexity Low_complexity 1 37 0 2291 111 5 42 chr5 86032079 86032456 -117053076 + L1MB2 LINE L1 5782 6144 -27 23 0 0 0 chr5 86032458 86032481 -117053051 + AT_rich Low_complexity Low_complexity 1 23 0 720 105 33 26 chr5 86032487 86032640 -117052892 + CT-rich Low_complexity Low_complexity 1 154 0 202 138 35 0 chr5 86032853 86032911 -117052621 + (TA)n Simple_repeat Simple_repeat 1 60 0 252 0 0 0 chr5 86036542 86036570 -117048962 + (T)n Simple_repeat Simple_repeat 1 28 0 1126 154 0 11 chr5 86036935 86037123 -117048409 - AluJb SINE Alu 0 312 127 867 108 0 0 chr5 86037922 86038051 -117047481 + (TA)n Simple_repeat Simple_repeat 2 130 0 3994 123 31 2 chr5 86038897 86039704 -117045828 + L1PB2 LINE L1 5016 5846 -305 1069 180 25 54 chr5 86040737 86040976 -117044556 + MLT1A1 LTR MaLR 1 232 -133 1822 284 69 17 chr5 86041125 86042269 -117043263 + L1M4 LINE L1 2557 3760 -2386 24 103 0 0 chr5 86042293 86042380 -117043152 + AT_rich Low_complexity Low_complexity 1 87 0 303 128 0 0 chr5 86042604 86042651 -117042881 + Alu SINE Alu 252 298 -2 907 272 33 63 chr5 86043262 86043378 -117042154 + MLT1H LTR MaLR 24 142 -407 1905 144 0 0 chr5 86043378 86043679 -117041853 - AluJb SINE Alu 0 305 5 907 272 33 63 chr5 86043679 86043892 -117041640 + MLT1H LTR MaLR 142 344 -205 1996 133 7 30 chr5 86044233 86044534 -117040998 - AluSg SINE Alu -16 294 1 222 118 0 0 chr5 86044614 86044648 -117040884 + (T)n Simple_repeat Simple_repeat 1 34 0 197 353 49 20 chr5 86044749 86044851 -117040681 - MIR SINE MIR -81 181 77 2242 126 7 0 chr5 86044967 86045277 -117040255 - AluSx SINE Alu 0 312 1 230 200 0 0 chr5 86045469 86045509 -117040023 - MLT1J1 LTR MaLR -140 306 267 538 228 95 62 chr5 86045551 86045636 -117039896 - MLT1I LTR MaLR -191 218 137 2136 106 3 17 chr5 86045636 86045929 -117039603 - AluSx SINE Alu -3 309 21 538 228 95 62 chr5 86045929 86046054 -117039478 - MLT1I LTR MaLR -272 137 1 217 317 35 14 chr5 86046074 86046216 -117039316 + MIR3 SINE MIR 20 164 -44 333 346 68 0 chr5 86046939 86047101 -117038431 + MIR SINE MIR 20 192 -70 792 181 0 0 chr5 86047125 86047258 -117038274 - FLAM_C SINE Alu 0 133 1 392 204 0 61 chr5 86047338 86047436 -117038096 - MIR SINE MIR -93 169 78 378 61 0 0 chr5 86047720 86047769 -117037763 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 2195 127 7 0 chr5 86047770 86048077 -117037455 - AluSg SINE Alu -1 309 1 384 349 46 66 chr5 86048362 86048709 -117036823 - L2 LINE L2 -23 3249 2910 372 281 234 45 chr5 86048809 86049769 -117035763 - L2 LINE L2 -563 2751 1610 267 264 28 0 chr5 86049952 86050024 -117035508 + GA-rich Low_complexity Low_complexity 4 77 0 2368 97 7 0 chr5 86051005 86051315 -117034217 - AluSq SINE Alu -1 312 1 366 123 0 0 chr5 86052029 86052086 -117033446 + (A)n Simple_repeat Simple_repeat 1 57 0 583 217 56 12 chr5 86052513 86052674 -117032858 - MIR SINE MIR -8 254 87 1808 131 39 14 chr5 86053354 86053661 -117031871 - AluSx SINE Alu 0 312 1 392 225 36 27 chr5 86054259 86054386 -117031146 + MIR3 SINE MIR 63 193 -15 2111 130 0 0 chr5 86054896 86055188 -117030344 - AluSg SINE Alu -18 292 1 2440 57 0 0 chr5 86055851 86056179 -117029353 - AluY SINE Alu 0 329 2 542 251 52 135 chr5 86057602 86058071 -117027461 + MLT1J1 LTR MaLR 10 398 -11 2070 97 0 0 chr5 86058664 86058923 -117026609 + AluSx SINE Alu 1 259 -53 2115 153 66 70 chr5 86059364 86059833 -117025699 + L1MD2 LINE L1 5532 5998 -361 2034 134 28 0 chr5 86059960 86060250 -117025282 + AluJb SINE Alu 1 298 -14 1913 141 26 7 chr5 86060468 86060772 -117024760 + AluSx SINE Alu 1 310 -2 369 0 0 0 chr5 86060776 86060817 -117024715 + (CA)n Simple_repeat Simple_repeat 2 42 0 406 215 58 16 chr5 86060824 86060945 -117024587 + Charlie7 DNA MER1_type 2474 2599 -13 2294 101 16 0 chr5 86061296 86061604 -117023928 + AluSq SINE Alu 1 313 0 266 258 113 8 chr5 86062212 86062336 -117023196 + L1ME3A LINE L1 5826 5962 -208 2261 114 16 0 chr5 86062380 86062687 -117022845 + AluSx SINE Alu 1 312 0 211 364 45 0 chr5 86062960 86063048 -117022484 + L2 LINE L2 2579 2670 -644 1906 110 4 4 chr5 86063152 86063415 -117022117 + AluSq SINE Alu 49 311 -2 1458 202 56 45 chr5 86064824 86065250 -117020282 - Zaphod DNA AcHobo -12 4019 3589 * 3479 179 69 79 chr5 86065237 86065470 -117020062 - Zaphod DNA AcHobo -626 67 -167 1687 191 24 3 chr5 86065470 86065764 -117019768 - AluJb SINE Alu -12 300 1 3479 179 69 79 chr5 86065764 86066323 -117019209 - Zaphod DNA AcHobo -860 4294967129 210 1667 179 10 26 chr5 86066323 86066636 -117018896 + AluJb SINE Alu 1 308 -4 3479 179 69 79 chr5 86066636 86066843 -117018689 - Zaphod DNA AcHobo -482 211 3 512 265 93 0 chr5 86067915 86068077 -117017455 - MER69A DNA AcHobo 0 177 1 2597 242 74 30 chr5 86068798 86069529 -117016003 + MER21B LTR ERV1 19 781 -82 524 248 30 91 chr5 86069859 86070089 -117015443 - LTR33 LTR ERVL -303 218 3 2226 106 0 23 chr5 86070149 86070452 -117015080 + AluSx SINE Alu 1 296 -16 1583 172 0 101 chr5 86070772 86071098 -117014434 - AluJo SINE Alu -9 293 1 1773 145 37 58 chr5 86072176 86072555 -117012977 - THE1C LTR MaLR -4 371 1 724 265 74 42 chr5 86072600 86072999 -117012533 + MLT1J2 LTR MaLR 7 450 0 382 287 9 9 chr5 86074242 86074357 -117011175 + L2 LINE L2 3157 3271 -1 426 344 0 0 chr5 86074502 86074627 -117010905 + L2 LINE L2 3148 3272 0 950 279 50 71 chr5 86076573 86077078 -117008454 + L2 LINE L2 2815 3308 -5 4281 185 28 20 chr5 86077191 86078056 -117007476 + L1MB8 LINE L1 5304 6334 0 302 317 156 0 chr5 86078056 86078242 -117007290 - L2 LINE L2 -1217 2097 1883 516 247 156 41 chr5 86078265 86078554 -117006978 - LTR16C LTR ERVL -2 489 71 1440 172 247 23 chr5 86079104 86079233 -117006299 + MSTB LTR MaLR 1 100 -326 2166 114 3 0 chr5 86079233 86079523 -117006009 + AluY SINE Alu 5 295 -16 1440 172 247 23 chr5 86079523 86079741 -117005791 + MSTB LTR MaLR 100 426 0 528 24 12 119 chr5 86079757 86079806 -117005726 - MADE1 DNA Mariner 0 80 42 2119 118 3 3 chr5 86079806 86080102 -117005430 + AluSx SINE Alu 1 296 -16 528 24 12 119 chr5 86080102 86080136 -117005396 - MADE1 DNA Mariner -38 42 6 191 309 0 0 chr5 86081180 86081235 -117004297 + L2 LINE L2 3199 3253 -19 1892 139 64 75 chr5 86081602 86081977 -117003555 + THE1C LTR MaLR 1 371 -4 254 351 47 27 chr5 86082363 86082511 -117003021 - L3 LINE CR1 -428 1149 999 213 349 0 0 chr5 86083011 86083077 -117002455 + (CA)n Simple_repeat Simple_repeat 2 67 0 465 314 110 71 chr5 86083103 86083626 -117001906 - L2 LINE L2 -86 3186 2654 869 249 118 48 chr5 86083689 86084103 -117001429 + LTR16C LTR ERVL 49 491 0 1230 251 87 74 chr5 86084200 86084634 -117000898 - MLT1G1 LTR MaLR 0 595 168 1592 142 124 8 chr5 86084634 86084901 -117000631 + AluSg1 SINE Alu 1 298 -11 2378 143 95 5 chr5 86084909 86085300 -117000232 + MSTB LTR MaLR 1 426 0 1230 251 87 74 chr5 86085300 86085383 -117000149 - MLT1G1 LTR MaLR -433 162 62 894 282 67 41 chr5 86086490 86087034 -116998498 - MLT1G LTR MaLR 0 555 1 2748 271 73 38 chr5 86087073 86087104 -116998428 + L1ME LINE L1 464 492 -6229 1986 154 138 31 chr5 86087104 86087494 -116998038 + MSTB1 LTR MaLR 1 432 0 2748 271 73 38 chr5 86087494 86088795 -116996737 + L1ME LINE L1 492 1870 -4851 1968 173 0 3 chr5 86088795 86089101 -116996431 + AluSx SINE Alu 1 305 -7 2748 271 73 38 chr5 86089101 86089136 -116996396 + L1ME LINE L1 1870 1902 -4819 828 185 0 14 chr5 86089138 86089284 -116996248 + AluJo SINE Alu 8 151 -161 462 188 0 0 chr5 86089285 86089401 -116996131 + AluSg/x SINE Alu 213 328 0 393 207 0 78 chr5 86089402 86089518 -116996014 + L1ME LINE L1 1854 1960 -4580 208 277 158 40 chr5 86089843 86089944 -116995588 - MIR SINE MIR -124 138 26 627 288 89 49 chr5 86090286 86090612 -116994920 + MLT1J LTR MaLR 72 410 -101 440 76 0 15 chr5 86090662 86090728 -116994804 + (GGGAA)n Simple_repeat Simple_repeat 2 66 0 231 167 0 0 chr5 86090760 86090802 -116994730 + GA-rich Low_complexity Low_complexity 2 43 0 348 279 56 45 chr5 86090845 86091024 -116994508 + MIR SINE MIR 81 261 -1 184 245 132 19 chr5 86091026 86091079 -116994453 - L2 LINE L2 -47 3266 3208 1302 138 4 83 chr5 86091261 86091515 -116994017 + L1PA15 LINE L1 5930 6163 -2 21 0 0 0 chr5 86091529 86091550 -116993982 + AT_rich Low_complexity Low_complexity 1 21 0 236 175 35 0 chr5 86091590 86091647 -116993885 + (TATG)n Simple_repeat Simple_repeat 2 60 0 591 273 46 31 chr5 86093815 86094009 -116991523 + MIR SINE MIR 2 198 -64 484 286 106 32 chr5 86094955 86095134 -116990398 - MIR3 SINE MIR 0 208 16 414 303 121 12 chr5 86095134 86095299 -116990233 - MER5A DNA MER1_type 0 189 7 545 192 130 113 chr5 86095455 86095522 -116990010 + MER5A DNA MER1_type 10 74 -115 2152 100 0 0 chr5 86095522 86095802 -116989730 + AluY SINE Alu 1 280 -31 545 192 130 113 chr5 86095802 86095911 -116989621 + MER5A DNA MER1_type 74 189 0 1014 216 123 118 chr5 86095938 86096490 -116989042 - MLT1H1 LTR MaLR 0 555 1 289 85 75 11 chr5 86096655 86096749 -116988783 + (CA)n Simple_repeat Simple_repeat 2 101 0 371 169 56 35 chr5 86096752 86096894 -116988638 + (CAG)n Simple_repeat Simple_repeat 2 146 0 246 163 12 50 chr5 86096981 86097061 -116988471 + (CCA)n Simple_repeat Simple_repeat 3 79 0 278 235 15 44 chr5 86097192 86097260 -116988272 + L2 LINE L2 3238 3303 -10 219 351 32 11 chr5 86097418 86097512 -116988020 - L2 LINE L2 -222 3050 2955 1883 138 48 0 chr5 86097786 86098076 -116987456 - AluSx SINE Alu -8 304 1 28 0 0 47 chr5 86099688 86099707 -116985825 + AT_rich Low_complexity Low_complexity 1 19 -22 3203 146 16 0 chr5 86099707 86099871 -116985661 + L1MB5 LINE L1 5660 5820 -354 1996 145 3 13 chr5 86099871 86100174 -116985358 + AluSx SINE Alu 1 300 -12 3203 146 16 0 chr5 86100174 86100508 -116985024 + L1MB5 LINE L1 5820 6166 -8 28 0 0 47 chr5 86100508 86100531 -116985001 + AT_rich Low_complexity Low_complexity 19 41 0 21 0 0 0 chr5 86100984 86101005 -116984527 + AT_rich Low_complexity Low_complexity 1 21 0 190 258 320 10 chr5 86101017 86101114 -116984418 + MER5A DNA MER1_type 56 182 -7 346 239 130 22 chr5 86101507 86101645 -116983887 - MER5B DNA MER1_type -5 173 21 379 234 79 114 chr5 86101662 86101889 -116983643 - L3 LINE CR1 -106 1471 1253 379 284 149 9 chr5 86101915 86102235 -116983297 - L1MDa LINE L1 -3762 2778 2418 1777 105 84 32 chr5 86102488 86102773 -116982759 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr5 86102826 86102856 -116982676 + AT_rich Low_complexity Low_complexity 1 30 0 2250 101 24 3 chr5 86102932 86103230 -116982302 - AluSq SINE Alu -9 304 1 524 300 50 14 chr5 86103238 86103572 -116981960 - L1M2 LINE L1 -4271 2270 1579 3064 173 50 50 chr5 86103996 86104051 -116981481 + L1MD3 LINE L1 6984 7038 -957 1033 146 0 6 chr5 86104051 86104209 -116981323 + L1PB4 LINE L1 5998 6154 -2 3064 173 50 50 chr5 86104209 86104322 -116981210 + L1MD3 LINE L1 7038 7150 -845 283 190 21 2 chr5 86104322 86104383 -116981149 + MLT1F1 LTR MaLR 69 122 -445 3064 173 50 50 chr5 86104383 86104970 -116980562 + L1MD3 LINE L1 7150 7995 0 3125 148 25 11 chr5 86104973 86105494 -116980038 + L1MB5 LINE L1 5647 6174 0 1878 138 31 3 chr5 86105506 86105796 -116979736 + AluJb SINE Alu 1 298 -14 353 317 33 8 chr5 86106149 86106269 -116979263 + L2 LINE L2 3191 3313 0 381 329 52 5 chr5 86106887 86107097 -116978435 + MIR SINE MIR 3 222 -40 1986 137 10 0 chr5 86107195 86107494 -116978038 + AluSq SINE Alu 1 302 -11 1004 157 6 0 chr5 86107641 86107847 -116977685 + FAM SINE Alu 1 96 0 209 143 43 0 chr5 86107800 86108076 -116977456 + GA-rich Low_complexity Low_complexity 1 287 0 * 28 0 0 0 chr5 86108304 86108332 -116977200 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 86110588 86110612 -116974920 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5 86111074 86111110 -116974422 + AT_rich Low_complexity Low_complexity 1 36 0 2321 103 0 0 chr5 86111156 86111456 -116974076 + AluSc SINE Alu 1 300 -9 767 287 45 8 chr5 86112169 86112570 -116972962 - LTR16A LTR ERVL 0 450 1 2081 103 35 0 chr5 86113495 86113777 -116971755 + AluY SINE Alu 1 292 -19 1535 225 59 46 chr5 86114018 86114409 -116971123 + MSTD LTR MaLR 1 396 0 408 259 53 15 chr5 86114692 86114823 -116970709 - MIR SINE MIR -59 203 68 240 253 20 81 chr5 86114884 86114983 -116970549 - MIR3 SINE MIR -4 204 112 2232 94 16 13 chr5 86116155 86116462 -116969070 - AluSx SINE Alu -3 309 2 275 252 180 9 chr5 86116541 86116652 -116968880 + MIR SINE MIR 133 262 0 2128 116 0 20 chr5 86116863 86117166 -116968366 - AluSx SINE Alu -15 297 1 1843 151 25 7 chr5 86117865 86118150 -116967382 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr5 86118154 86118185 -116967347 + AT_rich Low_complexity Low_complexity 1 31 0 600 336 31 7 chr5 86118408 86118694 -116966838 + L3 LINE CR1 695 987 -590 1154 194 169 28 chr5 86119061 86119381 -116966151 + MER20B DNA MER1_type 164 528 -255 1828 136 7 7 chr5 86119480 86119752 -116965780 + AluJb SINE Alu 24 295 -17 210 261 0 0 chr5 86119884 86119930 -116965602 + CT-rich Low_complexity Low_complexity 3 48 0 2137 127 0 10 chr5 86120010 86120324 -116965208 - AluJb SINE Alu 0 312 2 745 259 45 8 chr5 86124098 86124345 -116961187 + L1ME4a LINE L1 5545 5800 -321 309 147 284 10 chr5 86124414 86124516 -116961016 + L1ME4a LINE L1 5991 6120 -1 217 274 71 24 chr5 86126292 86126376 -116959156 + L2 LINE L2 3145 3232 -40 183 253 0 114 chr5 86126486 86126565 -116958967 - MIR3 SINE MIR -11 197 128 670 192 62 22 chr5 86126857 86127039 -116958493 + MIR SINE MIR 3 191 -62 2551 69 0 0 chr5 86127126 86127431 -116958101 + AluY SINE Alu 1 305 -6 366 246 0 0 chr5 86128243 86128308 -116957224 - L2 LINE L2 -3 3269 3205 2114 135 3 0 chr5 86128495 86128799 -116956733 + AluJo SINE Alu 1 305 -7 1992 133 49 75 chr5 86129650 86130035 -116955497 - THE1C LTR MaLR 0 375 1 1064 51 0 43 chr5 86130140 86130278 -116955254 + AluY SINE Alu 1 132 -179 2228 101 3 7 chr5 86130292 86130599 -116954933 + AluY SINE Alu 1 306 -5 2297 112 0 0 chr5 86130872 86131176 -116954356 + AluSx SINE Alu 1 304 -8 220 247 12 106 chr5 86131415 86131500 -116954032 - MER5A DNA MER1_type -11 178 102 2216 98 0 55 chr5 86131901 86132228 -116953304 + AluSg SINE Alu 1 309 -1 302 302 9 38 chr5 86133249 86133355 -116952177 + MIR3 SINE MIR 83 185 -23 26 0 0 0 chr5 86135848 86135874 -116949658 + GC_rich Low_complexity Low_complexity 1 26 0 1994 109 3 7 chr5 86136835 86137149 -116948383 - AluSx SINE Alu 0 313 1 838 165 0 23 chr5 86137153 86137286 -116948246 - AluSq/x SINE Alu -179 133 4 270 136 0 0 chr5 86137387 86137431 -116948101 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 1794 147 31 10 chr5 86139762 86140054 -116945478 - AluSx SINE Alu -14 298 1 2490 65 0 0 chr5 86140496 86140806 -116944726 + AluY SINE Alu 2 311 0 186 43 0 0 chr5 86143275 86143298 -116942234 + (TC)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr5 86143300 86143324 -116942208 + (TG)n Simple_repeat Simple_repeat 2 25 0 2098 144 0 13 chr5 86143497 86143810 -116941722 + AluJb SINE Alu 1 309 -3 2229 171 0 6 chr5 86144306 86144645 -116940887 - MER1B DNA MER1_type 0 337 1 2128 175 62 58 chr5 86144651 86145154 -116940378 - MLT1D LTR MaLR 0 505 1 1686 184 145 22 chr5 86145170 86145574 -116939958 - L1MB7 LINE L1 0 6184 5725 1018 217 96 17 chr5 86145582 86145925 -116939607 - L1MB7 LINE L1 -573 5593 5204 2984 89 0 5 chr5 86146027 86146410 -116939122 + L1PA13 LINE L1 5782 6162 -1 1615 147 3 87 chr5 86148826 86149160 -116936372 - AluJb SINE Alu -6 306 1 207 245 143 31 chr5 86149169 86149267 -116936265 + L2 LINE L2 3162 3270 -43 1971 120 0 30 chr5 86149967 86150267 -116935265 + AluSg SINE Alu 1 291 -19 22 0 0 0 chr5 86151675 86151697 -116933835 + AT_rich Low_complexity Low_complexity 1 22 0 328 273 53 27 chr5 86151830 86151980 -116933552 + MIR SINE MIR 31 184 -78 21 0 0 0 chr5 86152054 86152075 -116933457 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr5 86152448 86152477 -116933055 + (TA)n Simple_repeat Simple_repeat 1 29 0 215 238 0 0 chr5 86152570 86152612 -116932920 + (CATA)n Simple_repeat Simple_repeat 2 43 0 298 188 58 72 chr5 86153663 86153801 -116931731 - Charlie7 DNA MER1_type -69 2543 2408 2445 83 3 0 chr5 86160574 86160876 -116924656 - AluSx SINE Alu -9 303 1 2233 105 3 10 chr5 86160897 86161201 -116924331 - AluSc SINE Alu -7 302 1 1781 165 94 3 chr5 86161464 86161773 -116923759 - MER1B DNA MER1_type 0 337 1 1944 157 3 0 chr5 86162884 86163189 -116922343 - AluJo SINE Alu -5 307 2 713 246 135 10 chr5 86169022 86169229 -116916303 - MIR SINE MIR -1 261 29 1921 157 7 16 chr5 86172117 86172422 -116913110 + AluJo SINE Alu 1 302 -10 429 340 13 6 chr5 86173251 86173410 -116912122 + MER5A DNA MER1_type 9 168 -21 2277 92 3 10 chr5 86173987 86174291 -116911241 - AluSx SINE Alu -10 302 1 2032 155 0 3 chr5 86175981 86176290 -116909242 - AluJo SINE Alu -4 308 1 2453 54 7 0 chr5 86176829 86177125 -116908407 + AluY SINE Alu 3 300 -11 332 273 18 36 chr5 86177350 86177460 -116908072 - MIR SINE MIR -60 148 41 22 0 0 0 chr5 86178286 86178308 -116907224 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 86181264 86181285 -116904247 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr5 86181617 86181647 -116903885 + (CA)n Simple_repeat Simple_repeat 2 31 0 510 278 113 10 chr5 86184519 86184765 -116900767 - MLT1L LTR MaLR -18 597 245 200 349 178 7 chr5 86185117 86185263 -116900269 - L2 LINE L2 0 3272 3102 413 250 22 37 chr5 86185419 86185555 -116899977 - MER94 DNA DNA 0 134 1 342 322 74 13 chr5 86185598 86185747 -116899785 - L2 LINE L2 -556 2758 2601 658 259 58 11 chr5 86185792 86185966 -116899566 - MIR SINE MIR -77 185 4 945 217 0 0 chr5 86186241 86186407 -116899125 + FRAM SINE Alu 1 166 0 248 204 28 133 chr5 86187300 86187342 -116898190 + Charlie7 DNA MER1_type 2424 2469 -143 1918 139 0 33 chr5 86187342 86187506 -116898026 - AluJb SINE Alu -21 291 140 2358 90 7 0 chr5 86187506 86187807 -116897725 - AluSx SINE Alu -9 303 1 1918 139 0 33 chr5 86187807 86187943 -116897589 - AluJb SINE Alu -172 140 1 248 204 28 133 chr5 86187943 86188111 -116897421 + Charlie7 DNA MER1_type 2469 2612 0 755 297 24 54 chr5 86188383 86188791 -116896741 + MLT1J LTR MaLR 58 492 -19 185 330 143 0 chr5 86189358 86189449 -116896083 + MIR SINE MIR 93 196 -66 483 286 125 29 chr5 86189492 86190313 -116895219 - L1ME LINE L1 -330 5791 4862 274 258 147 10 chr5 86190438 86190636 -116894896 - L1ME LINE L1 -1445 4701 4477 2264 99 3 0 chr5 86190788 86191091 -116894441 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr5 86191091 86191120 -116894412 + AT_rich Low_complexity Low_complexity 1 29 0 1881 94 59 31 chr5 86191120 86191407 -116894125 + AluSg SINE Alu 1 295 -15 363 295 20 20 chr5 86191409 86191558 -116893974 - L1ME LINE L1 -1945 4201 4053 240 86 0 0 chr5 86192328 86192363 -116893169 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 35 0 0 chr5 86192589 86192618 -116892914 + AT_rich Low_complexity Low_complexity 1 29 0 724 165 0 24 chr5 86192618 86192745 -116892787 - FLAM_C SINE Alu -8 125 2 1068 152 12 0 chr5 86193080 86193245 -116892287 - FAM SINE Alu -7 168 2 318 213 137 123 chr5 86193363 86193641 -116891891 - HAL1 LINE L1 -943 1564 1276 1645 188 3 14 chr5 86193641 86193923 -116891609 - AluJo SINE Alu -32 280 2 318 213 137 123 chr5 86193923 86194090 -116891442 - HAL1 LINE L1 -1231 1276 1113 22 35 0 0 chr5 86198606 86198635 -116886897 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 86200374 86200403 -116885129 + AT_rich Low_complexity Low_complexity 1 29 0 518 265 19 47 chr5 86201002 86201213 -116884319 - Charlie8 DNA MER1_type -2141 276 72 1404 69 32 0 chr5 86201298 86201486 -116884046 + MER30 DNA MER1_type 1 194 -36 2579 48 0 10 chr5 86202438 86202752 -116882780 + AluY SINE Alu 1 311 0 2407 77 3 0 chr5 86203937 86204234 -116881298 + AluSp SINE Alu 1 298 -15 1847 139 0 7 chr5 86204238 86204543 -116880989 + AluJb SINE Alu 20 322 0 595 94 0 0 chr5 86204750 86204835 -116880697 - AluSc SINE Alu -3 306 222 1659 169 27 7 chr5 86205184 86205480 -116880052 - AluJo SINE Alu -10 302 1 1525 185 27 7 chr5 86206082 86206374 -116879158 - AluSx SINE Alu -14 298 1 2086 157 0 0 chr5 86208043 86208355 -116877177 + AluSx SINE Alu 1 312 0 860 204 129 15 chr5 86208810 86209011 -116876521 + MER58A DNA MER1_type 1 224 0 2127 127 0 24 chr5 86209088 86209419 -116876113 + MER1B DNA MER1_type 4 326 -13 1523 200 123 36 chr5 86209432 86209649 -116875883 + LTR40a LTR ERVL 40 237 -282 7072 52 17 9 chr5 86209649 86210629 -116874903 - L1PA7 LINE L1 -2 6152 5170 1523 200 123 36 chr5 86210629 86210851 -116874681 + LTR40a LTR ERVL 237 517 -2 253 319 222 0 chr5 86210916 86210988 -116874544 + MER91A DNA MER1_type 4 91 -105 342 203 27 0 chr5 86211934 86212008 -116873524 - MER116 DNA Mariner 0 80 5 243 294 103 24 chr5 86212323 86212449 -116873083 - L2 LINE L2 0 3272 3137 745 271 162 81 chr5 86212573 86212775 -116872757 + L2 LINE L2 2543 2727 -586 731 85 19 0 chr5 86212775 86212881 -116872651 + L1PA15 LINE L1 6058 6165 0 745 271 162 81 chr5 86212881 86213261 -116872271 + L2 LINE L2 2727 3189 -124 26 0 0 0 chr5 86215198 86215224 -116870308 + AT_rich Low_complexity Low_complexity 1 26 0 1376 210 89 3 chr5 86215291 86215605 -116869927 + MER58B DNA MER1_type 1 341 0 23 33 0 0 chr5 86216285 86216315 -116869217 + AT_rich Low_complexity Low_complexity 1 30 0 2408 98 3 0 chr5 86216344 86216651 -116868881 + AluSg SINE Alu 1 308 -2 330 320 29 74 chr5 86216854 86217029 -116868503 + MIR SINE MIR 14 180 -82 257 374 70 11 chr5 86217131 86217417 -116868115 - L2 LINE L2 -2534 780 478 381 22 0 0 chr5 86217957 86218003 -116867529 + (CA)n Simple_repeat Simple_repeat 2 47 0 481 276 24 44 chr5 86219131 86219322 -116866210 + MIR SINE MIR 24 208 -54 28 0 0 0 chr5 86221054 86221082 -116864450 + AT_rich Low_complexity Low_complexity 1 28 0 2382 69 0 0 chr5 86221164 86221455 -116864077 + AluSg SINE Alu 1 291 -19 1533 184 145 44 chr5 86221908 86222364 -116863168 + MLT1D LTR MaLR 2 503 -2 200 211 0 0 chr5 86226620 86226658 -116858874 - L2 LINE L2 -16 3256 3219 4940 219 50 56 chr5 86227855 86230013 -116855519 + L1PA10 LINE L1 10 2209 -4252 17968 125 11 4 chr5 86230013 86230984 -116854548 + L1PA10 LINE L1 2605 3568 -2915 2069 133 7 0 chr5 86230984 86231284 -116854248 + AluSp SINE Alu 1 302 -11 17968 125 11 4 chr5 86231284 86233069 -116852463 + L1PA10 LINE L1 3568 5336 -1147 2281 101 0 0 chr5 86233069 86233366 -116852166 + AluSx SINE Alu 5 301 -11 17968 125 11 4 chr5 86233366 86234519 -116851013 + L1PA10 LINE L1 5336 6480 -3 241 255 0 0 chr5 86234608 86234659 -116850873 - L2 LINE L2 -1 3271 3221 203 261 138 15 chr5 86234807 86234872 -116850660 - MIR3 SINE MIR -6 202 130 768 201 118 55 chr5 86235019 86235416 -116850116 - L1MC5 LINE L1 -44 7917 7496 2417 97 0 0 chr5 86235650 86235960 -116849572 - AluSg SINE Alu 0 310 1 31 44 0 0 chr5 86236598 86236643 -116848889 + AT_rich Low_complexity Low_complexity 1 45 0 24 0 0 0 chr5 86236663 86236687 -116848845 + AT_rich Low_complexity Low_complexity 1 24 0 2044 94 58 0 chr5 86237609 86237884 -116847648 + AluSp SINE Alu 3 293 -20 180 338 54 0 chr5 86239169 86239243 -116846289 + L2 LINE L2 3171 3248 -65 404 217 16 62 chr5 86239356 86239485 -116846047 + MER77 LTR ERV1 80 202 -403 1026 267 100 69 chr5 86239524 86240005 -116845527 + MER77 LTR ERV1 154 708 -7 241 327 50 69 chr5 86240554 86240713 -116844819 + L2 LINE L2 2892 3047 -225 254 323 84 24 chr5 86241037 86241204 -116844328 + L2 LINE L2 2251 2427 -887 378 347 153 21 chr5 86241458 86241784 -116843748 + L2 LINE L2 2903 3271 -1 1897 147 4 0 chr5 86242970 86243249 -116842283 - AluJb SINE Alu -32 280 1 337 256 128 8 chr5 86243267 86243392 -116842140 - L1ME3A LINE L1 -304 5866 5727 219 69 0 0 chr5 86243394 86243423 -116842109 + (T)n Simple_repeat Simple_repeat 1 29 0 225 0 0 0 chr5 86243564 86243589 -116841943 + (T)n Simple_repeat Simple_repeat 1 25 0 2471 27 41 7 chr5 86244242 86244537 -116840995 - AluY SINE Alu -5 306 2 372 339 41 31 chr5 86245419 86245614 -116839918 - MIR SINE MIR -65 197 1 2385 75 0 3 chr5 86245763 86246058 -116839474 - AluSq SINE Alu -19 294 1 23 54 0 0 chr5 86246632 86246669 -116838863 + AT_rich Low_complexity Low_complexity 1 37 0 288 297 195 8 chr5 86247021 86247149 -116838383 - MIR3 SINE MIR -3 205 54 1378 104 10 147 chr5 86247194 86247493 -116838039 + AluJb SINE Alu 55 312 0 602 266 83 38 chr5 86247604 86248326 -116837206 - L1ME4a LINE L1 -4 6117 5318 1014 192 36 9 chr5 86248333 86248552 -116836980 - L1ME3A LINE L1 -9 6161 5937 25 83 0 0 chr5 86248567 86248627 -116836905 + AT_rich Low_complexity Low_complexity 1 60 0 818 302 36 4 chr5 86249261 86249513 -116836019 - MIR SINE MIR 0 262 3 1173 212 150 99 chr5 86249558 86250152 -116835380 + MER20B DNA MER1_type 90 713 -70 798 261 99 0 chr5 86250791 86251013 -116834519 - MIR SINE MIR 0 262 19 22 0 0 0 chr5 86252173 86252195 -116833337 + AT_rich Low_complexity Low_complexity 1 22 0 370 284 39 24 chr5 86252994 86253121 -116832411 + L2 LINE L2 2694 2822 -492 550 239 157 0 chr5 86253134 86253293 -116832239 + MER3 DNA MER1_type 19 202 -7 1200 164 139 50 chr5 86253747 86254028 -116831504 - AluJo SINE Alu -6 306 1 221 211 88 19 chr5 86254889 86254980 -116830552 - MIR SINE MIR -79 129 38 624 269 77 69 chr5 86255447 86255607 -116829925 + L1ME LINE L1 5416 5573 -548 1666 173 18 7 chr5 86255607 86255891 -116829641 - AluJo SINE Alu -25 287 1 624 269 77 69 chr5 86255891 86256130 -116829402 + L1ME LINE L1 5573 5777 -344 837 204 13 6 chr5 86256136 86256293 -116829239 - AluJb SINE Alu -14 298 141 878 280 25 21 chr5 86256676 86256915 -116828617 - MIR SINE MIR -21 241 2 265 348 116 67 chr5 86257537 86257614 -116827918 + L2 LINE L2 2911 2983 -289 2202 127 0 0 chr5 86257614 86257922 -116827610 - AluSx SINE Alu -4 308 1 265 348 116 67 chr5 86257922 86258189 -116827343 + L2 LINE L2 2983 3272 0 205 310 147 9 chr5 86258598 86258714 -116826818 + L2 LINE L2 3115 3246 -26 7585 50 5 30 chr5 86258946 86260470 -116825062 + SVA Other Other 16 1385 -1 641 286 196 22 chr5 86260889 86261116 -116824416 - L2 LINE L2 -1 3312 3126 1487 212 73 12 chr5 86261116 86261460 -116824072 + MLT1A1 LTR MaLR 1 365 0 641 286 196 22 chr5 86261460 86261738 -116823794 - L2 LINE L2 -187 3126 2709 1847 111 41 15 chr5 86261792 86262062 -116823470 + AluY SINE Alu 5 281 -30 480 224 82 14 chr5 86262075 86262241 -116823291 - L1MC/D LINE L1 -489 5632 5457 327 272 61 41 chr5 86262559 86262706 -116822826 - L1MC/D LINE L1 -2121 5687 5538 318 328 60 9 chr5 86264150 86264266 -116821266 - L2 LINE L2 0 3313 3192 21 0 0 0 chr5 86264450 86264471 -116821061 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 86267559 86267580 -116817952 + AT_rich Low_complexity Low_complexity 1 21 0 1871 145 3 3 chr5 86268350 86268663 -116816869 + AluJb SINE Alu 1 313 0 244 173 58 0 chr5 86270132 86270184 -116815348 - MIR SINE MIR -96 166 112 261 106 0 0 chr5 86272865 86272912 -116812620 + MER4B-int LTR ERV1 1150 1196 -5562 273 182 0 0 chr5 86272912 86272967 -116812565 + (TA)n Simple_repeat Simple_repeat 1 55 0 1681 160 68 0 chr5 86272967 86273230 -116812302 - AluJb SINE Alu -29 283 3 24 0 0 0 chr5 86273235 86273259 -116812273 + AT_rich Low_complexity Low_complexity 1 24 0 572 336 54 79 chr5 86273480 86273834 -116811698 - L2 LINE L2 -1 3271 2927 635 289 67 29 chr5 86273927 86274166 -116811366 - MIR SINE MIR -14 248 1 790 269 35 31 chr5 86277003 86277230 -116808302 + MIR SINE MIR 16 243 -19 195 309 12 48 chr5 86277642 86277726 -116807806 - MIR3 SINE MIR -11 197 117 189 171 0 0 chr5 86278779 86278814 -116806718 + A-rich Low_complexity Low_complexity 1 35 0 894 236 167 72 chr5 86278858 86279342 -116806190 + L2 LINE L2 2447 2976 -338 351 306 14 21 chr5 86279343 86279487 -116806045 + L2 LINE L2 3095 3237 -76 2278 104 0 0 chr5 86279488 86279785 -116805747 - AluSx SINE Alu -15 297 1 229 226 0 38 chr5 86280195 86280248 -116805284 + MER5B DNA MER1_type 2 52 -126 268 271 31 42 chr5 86280278 86280374 -116805158 - MER5B DNA MER1_type -47 131 37 36325 40 4 5 chr5 86280374 86284855 -116800677 + L1PA4 LINE L1 1 4473 -1673 7212 30 7 10 chr5 86284991 86286602 -116798930 + L1PA4 LINE L1 4548 6155 0 188 283 0 0 chr5 86286622 86286668 -116798864 - MER5B DNA MER1_type -131 47 2 1048 163 6 0 chr5 86286676 86286848 -116798684 + FRAM SINE Alu 1 173 -3 231 36 0 0 chr5 86287292 86287320 -116798212 + (GAAAA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 86287495 86287517 -116798015 + AT_rich Low_complexity Low_complexity 1 22 0 2237 115 0 3 chr5 86288473 86288777 -116796755 + AluSx SINE Alu 1 303 -9 594 299 37 5 chr5 86289039 86289226 -116796306 + MIR SINE MIR 19 211 -51 314 253 131 0 chr5 86291756 86291855 -116793677 - MIR SINE MIR -105 157 46 323 168 0 84 chr5 86291855 86291950 -116793582 - L1MB3 LINE L1 -80 6103 6017 1880 276 16 33 chr5 86291974 86292608 -116792924 - L1ME LINE L1 -5414 656 34 26 0 0 0 chr5 86292631 86292657 -116792875 + AT_rich Low_complexity Low_complexity 1 26 0 2052 117 10 13 chr5 86293066 86293365 -116792167 + AluSx SINE Alu 1 298 -14 2102 115 7 0 chr5 86293588 86293874 -116791658 + AluSx SINE Alu 17 304 -8 225 250 62 10 chr5 86294979 86295075 -116790457 + (CAGAGA)n Simple_repeat Simple_repeat 4 104 0 2014 172 3 35 chr5 86295569 86295942 -116789590 - MLT1A1 LTR MaLR 0 365 5 662 250 29 0 chr5 86296852 86296992 -116788540 + MER58B DNA MER1_type 198 341 0 402 300 67 39 chr5 86297000 86297180 -116788352 - MER5A DNA MER1_type 0 189 5 387 260 40 0 chr5 86298805 86298905 -116786627 + MIR SINE MIR 155 258 -4 180 0 0 0 chr5 86299545 86299565 -116785967 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2234 91 0 7 chr5 86300263 86300572 -116784960 + AluSq SINE Alu 1 307 0 1693 61 5 0 chr5 86300935 86301149 -116784383 - AluY SINE Alu -2 309 95 1741 178 18 0 chr5 86402897 86403178 -116682354 - AluJo SINE Alu -26 286 1 333 85 21 0 chr5 86403290 86403337 -116682195 + MER33 DNA MER1_type 39 86 -238 274 323 10 61 chr5 86403932 86404031 -116681501 + MIR SINE MIR 23 116 -92 24 0 0 0 chr5 86404037 86404061 -116681471 + AT_rich Low_complexity Low_complexity 1 24 0 689 191 32 0 chr5 86404098 86404224 -116681308 - FLAM_C SINE Alu -2 131 2 252 379 98 17 chr5 86404438 86404794 -116680738 + L2 LINE L2 2355 2739 -575 269 79 0 0 chr5 86404894 86404932 -116680600 - L1MC2 LINE L1 -37 6307 6270 1934 221 99 51 chr5 86405146 86405712 -116679820 - MLT1E LTR MaLR 0 593 1 2090 113 10 3 chr5 86405822 86406132 -116679400 + L1MC1 LINE L1 6011 6322 -11 1986 242 84 45 chr5 86406164 86406804 -116678728 - L2 LINE L2 -948 2366 1702 2690 183 39 0 chr5 86406806 86407342 -116678190 + L1MB7 LINE L1 4749 5305 -841 977 174 0 0 chr5 86407345 86407494 -116678038 + AluSq/x SINE Alu 1 149 -163 2280 160 143 8 chr5 86407509 86407978 -116677554 + L1MB7 LINE L1 5341 5872 -312 9039 202 59 42 chr5 86407993 86408068 -116677464 - L1MC1 LINE L1 -148 6465 6393 924 223 0 0 chr5 86408068 86408234 -116677298 - FRAM SINE Alu 0 166 1 9039 202 59 42 chr5 86408234 86408247 -116677285 - L1MC1 LINE L1 -220 6393 6382 2314 80 26 3 chr5 86408247 86408549 -116676983 - AluSx SINE Alu -3 309 1 9039 202 59 42 chr5 86408549 86409661 -116675871 - L1MC1 LINE L1 -231 6382 5290 592 207 26 0 chr5 86409661 86409777 -116675755 - FLAM_A SINE Alu -10 132 14 9039 202 59 42 chr5 86409777 86412570 -116672962 - L1MC1 LINE L1 -1323 5290 2272 1912 121 34 24 chr5 86412570 86412867 -116672665 - AluSx SINE Alu -12 300 1 9039 202 59 42 chr5 86412867 86413214 -116672318 - L1MC1 LINE L1 -4341 2272 1932 1421 154 57 74 chr5 86413214 86413333 -116672199 + AluJo SINE Alu 6 125 -187 225 0 0 0 chr5 86413333 86413358 -116672174 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 1421 154 57 74 chr5 86413358 86413380 -116672152 + AluJo SINE Alu 125 146 -166 2197 98 50 0 chr5 86413380 86413677 -116671855 + AluSx SINE Alu 1 312 0 1421 154 57 74 chr5 86413677 86413833 -116671699 + AluJo SINE Alu 146 299 -13 421 174 33 0 chr5 86413837 86413929 -116671603 - L1MC1 LINE L1 -4504 1922 1828 25 0 0 0 chr5 86413931 86413956 -116671576 + AT_rich Low_complexity Low_complexity 1 25 0 1132 164 27 0 chr5 86413963 86414146 -116671386 - AluJo SINE Alu -124 188 1 3729 189 58 9 chr5 86414164 86414927 -116670605 - L1MC1 LINE L1 -5607 819 20 818 294 131 32 chr5 86414927 86415463 -116670069 + L2 LINE L2 2740 3313 0 417 259 18 114 chr5 86415953 86416119 -116669413 - MER5A DNA MER1_type -5 184 35 379 333 37 0 chr5 86416367 86416502 -116669030 - L3 LINE CR1 -117 1460 1321 22 0 0 0 chr5 86416539 86416561 -116668971 + AT_rich Low_complexity Low_complexity 1 22 0 235 247 112 11 chr5 86417121 86417210 -116668322 - HAL1 LINE L1 -906 1601 1504 684 263 144 98 chr5 86417377 86417882 -116667650 - L1MEd LINE L1 -4887 1232 752 2593 96 8 6 chr5 86417882 86418245 -116667287 - THE1B LTR MaLR 0 364 1 684 263 144 98 chr5 86418245 86418420 -116667112 - L1MEd LINE L1 -5367 752 586 1700 181 7 4 chr5 86418420 86418726 -116666806 - AluJb SINE Alu 0 307 1 684 263 144 98 chr5 86418726 86418958 -116666574 - L1MEd LINE L1 -5533 586 276 21 0 0 0 chr5 86419090 86419111 -116666421 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 86419203 86419224 -116666308 + AT_rich Low_complexity Low_complexity 1 21 0 258 136 0 0 chr5 86419237 86419281 -116666251 + (CA)n Simple_repeat Simple_repeat 2 45 0 6242 85 31 3 chr5 86419945 86421106 -116664426 - L1PA11 LINE L1 0 6174 5008 886 260 168 36 chr5 86421265 86421947 -116663585 - L1ME4a LINE L1 -82 6039 5282 777 246 84 97 chr5 86422409 86423244 -116662288 - L1ME LINE L1 -674 5492 4670 2033 132 3 3 chr5 86423244 86423540 -116661992 - AluSx SINE Alu -16 296 1 777 246 84 97 chr5 86423540 86423577 -116661955 - L1ME LINE L1 -1496 4670 4634 336 268 21 28 chr5 86423720 86423862 -116661670 + T-rich Low_complexity Low_complexity 4 144 0 23 0 0 0 chr5 86423882 86423905 -116661627 + AT_rich Low_complexity Low_complexity 1 23 0 2235 120 0 0 chr5 86424093 86424402 -116661130 - AluSg SINE Alu -1 309 1 240 204 74 0 chr5 86424468 86424522 -116661010 - L1MC/D LINE L1 -2014 5794 5737 2341 94 3 0 chr5 86424775 86425074 -116660458 - AluSx SINE Alu -12 300 1 530 242 130 27 chr5 86427384 86427607 -116657925 - MIR SINE MIR -6 256 11 21 0 0 0 chr5 86429769 86429790 -116655742 + AT_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr5 86429824 86429881 -116655651 + AT_rich Low_complexity Low_complexity 1 57 0 1302 120 0 0 chr5 86429901 86430076 -116655456 - AluSg/x SINE Alu -16 296 122 187 359 66 19 chr5 86430497 86430603 -116654929 - MIR3 SINE MIR -19 189 79 312 236 34 11 chr5 86432522 86432611 -116652921 + MER103 DNA DNA 16 106 -60 354 98 0 0 chr5 86432930 86432981 -116652551 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 269 15 0 chr5 86433112 86433179 -116652353 + GA-rich Low_complexity Low_complexity 5 72 0 214 171 0 0 chr5 86433341 86433382 -116652150 + T-rich Low_complexity Low_complexity 3 43 0 2060 89 3 98 chr5 86433777 86434104 -116651428 - AluSq SINE Alu -17 296 1 2045 123 36 3 chr5 86434376 86434677 -116650855 + AluSx SINE Alu 1 311 -1 26 30 0 0 chr5 86435420 86435453 -116650079 + AT_rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr5 86435704 86435728 -116649804 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 6079 64 25 2 chr5 86435728 86436539 -116648993 - L1PA8 LINE L1 -24 6148 5320 3527 202 49 106 chr5 86436534 86436951 -116648581 - L1MB8 LINE L1 -62 6927 6488 * 2036 166 29 60 chr5 86436951 86437397 -116648135 - MSTB1 LTR MaLR 0 432 1 3527 202 49 106 chr5 86437397 86439484 -116646048 - L1MB8 LINE L1 -501 6488 4576 292 259 25 0 chr5 86439550 86439631 -116645901 - L1MB8 LINE L1 -6628 231 149 38 111 0 0 chr5 86439743 86439914 -116645618 + AT_rich Low_complexity Low_complexity 1 171 0 302 243 0 0 chr5 86439918 86439992 -116645540 - HAL1 LINE L1 -368 2139 2066 524 170 47 19 chr5 86440676 86440782 -116644750 + Charlie1 DNA MER1_type 2343 2451 -310 296 132 38 0 chr5 86440834 86440887 -116644645 - L1MCc LINE L1 -3446 3495 3441 1859 243 50 104 chr5 86441027 86441454 -116644078 - L1MCc LINE L1 -4094 3028 2580 1981 131 41 22 chr5 86441454 86441820 -116643712 - L1MA2 LINE L1 0 6304 5932 1859 243 50 104 chr5 86441820 86443501 -116642031 - L1MCc LINE L1 -4542 2580 822 372 294 181 24 chr5 86443609 86443902 -116641630 - L1MCc LINE L1 -5824 599 261 222 65 43 22 chr5 86444138 86444184 -116641348 + CT-rich Low_complexity Low_complexity 3 49 0 402 116 3 28 chr5 86444754 86444830 -116640702 - MER49 LTR ERV1 0 912 646 6929 53 16 5 chr5 86444859 86446045 -116639487 - L1PA6 LINE L1 0 6154 4956 38991 79 13 2 chr5 86446147 86451519 -116634013 - L1P2 LINE L1 -719 5435 13 1825 120 7 74 chr5 86451723 86452032 -116633500 + AluSx SINE Alu 5 292 -20 1813 182 3 0 chr5 86452037 86452334 -116633198 + AluJb SINE Alu 3 300 -12 1941 126 41 0 chr5 86452453 86452746 -116632786 - AluSx SINE Alu -7 305 1 2318 98 0 22 chr5 86453112 86453428 -116632104 + AluY SINE Alu 1 309 -2 570 250 120 0 chr5 86453461 86453638 -116631894 + MIR SINE MIR 63 262 0 1611 198 19 7 chr5 86453835 86454143 -116631389 - AluJo SINE Alu 0 312 1 2443 121 8 6 chr5 86454408 86454771 -116630761 - THE1B LTR MaLR 0 364 1 560 274 148 18 chr5 86454974 86455197 -116630335 - MIR SINE MIR -3 259 8 2170 140 21 0 chr5 86457030 86457359 -116628173 + MER1B DNA MER1_type 2 337 0 1519 251 40 12 chr5 86457405 86457924 -116627608 + L1ME1 LINE L1 4654 5187 -959 185 150 0 25 chr5 86457925 86457965 -116627567 + (TCC)n Simple_repeat Simple_repeat 1 39 0 594 220 7 35 chr5 86457966 86458107 -116627425 - FLAM_C SINE Alu -1 142 6 2860 201 67 68 chr5 86458108 86458500 -116627032 + L1ME1 LINE L1 5168 5559 -775 2357 90 3 0 chr5 86458500 86458799 -116626733 + AluSp SINE Alu 1 300 -13 2860 201 67 68 chr5 86458799 86459417 -116626115 + L1ME1 LINE L1 5559 6334 0 180 111 0 0 chr5 86459681 86459708 -116625824 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 21 82 0 0 chr5 86459909 86459958 -116625574 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 86460737 86460758 -116624774 + AT_rich Low_complexity Low_complexity 1 21 0 3101 166 38 20 chr5 86461018 86461428 -116624104 - L1MD1 LINE L1 0 6242 5841 252 0 0 0 chr5 86461428 86461456 -116624076 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1805 148 11 0 chr5 86461456 86461733 -116623799 - AluSx SINE Alu -32 280 1 3101 166 38 20 chr5 86461733 86461958 -116623574 - L1MD1 LINE L1 -400 5842 5595 41137 33 29 2 chr5 86461964 86467947 -116617585 - L1PA2 LINE L1 -2 6153 2 1472 142 151 6 chr5 86467947 86468294 -116617238 - L1MD1 LINE L1 -634 5608 5215 2142 102 14 0 chr5 86468340 86468624 -116616908 + AluSg SINE Alu 1 288 -22 842 228 78 14 chr5 86468703 86468922 -116616610 + MIR SINE MIR 29 261 -1 5152 155 41 38 chr5 86469494 86470479 -116615053 - L1PA16 LINE L1 -1 6165 5185 723 24 0 0 chr5 86470479 86470564 -116614968 + (TTCC)n Simple_repeat Simple_repeat 3 87 0 5152 155 41 38 chr5 86470564 86470604 -116614928 - L1PA16 LINE L1 -981 5185 5147 1803 158 32 0 chr5 86470604 86470883 -116614649 - AluSx SINE Alu -24 288 1 5152 155 41 38 chr5 86470883 86471303 -116614229 - L1PA16 LINE L1 -1019 5147 4730 2056 120 0 7 chr5 86471303 86471594 -116613938 - AluSx SINE Alu -17 295 7 5152 155 41 38 chr5 86471594 86471922 -116613610 - L1PA16 LINE L1 -1436 4730 4392 300 70 0 0 chr5 86471922 86471965 -116613567 + (TG)n Simple_repeat Simple_repeat 2 44 0 5152 155 41 38 chr5 86471965 86472068 -116613464 - L1PA16 LINE L1 -1774 4392 4291 1723 159 35 10 chr5 86472068 86472357 -116613175 - AluSx SINE Alu -14 298 3 964 166 142 32 chr5 86473360 86473607 -116611925 + L1MB8 LINE L1 5896 6169 -9 1200 84 13 0 chr5 86473726 86473880 -116611652 - AluSc SINE Alu -21 288 133 1880 124 62 0 chr5 86473880 86474153 -116611379 - AluSc SINE Alu -11 298 9 953 166 66 11 chr5 86474253 86474434 -116611098 - AluSx SINE Alu -119 193 3 230 196 0 36 chr5 86474436 86474492 -116611040 - L1PA16 LINE L1 -1843 4303 4250 843 161 161 29 chr5 86475416 86475658 -116609874 + L1MB8 LINE L1 5896 6169 -9 1200 84 13 0 chr5 86475773 86475927 -116609605 - AluSc SINE Alu -21 288 133 1889 122 68 0 chr5 86475927 86476206 -116609326 - AluSc SINE Alu -11 298 1 276 306 25 50 chr5 86477062 86477183 -116608349 + MIR SINE MIR 20 137 -125 * 320 272 34 88 chr5 86477160 86477307 -116608225 + L2 LINE L2 3133 3271 -1 298 258 0 11 chr5 86477301 86477390 -116608142 + MIR SINE MIR 137 224 -38 * 1180 224 115 8 chr5 86477484 86477841 -116607691 - MLT2C1 LTR ERVL -2 395 1 236 271 17 0 chr5 86477961 86478020 -116607512 - L2 LINE L2 0 3313 3254 334 326 126 73 chr5 86478243 86478998 -116606534 - L2 LINE L2 -337 2977 2183 339 246 0 0 chr5 86479425 86479494 -116606038 + MIR3 SINE MIR 97 165 -43 1124 187 33 33 chr5 86480674 86480888 -116604644 + MER8 DNA MER2_type 1 214 -25 349 127 79 0 chr5 86481459 86481522 -116604010 - L1MB8 LINE L1 -1 6177 6110 660 144 0 169 chr5 86481522 86481708 -116603824 + FLAM_C SINE Alu 1 159 0 944 178 0 29 chr5 86481720 86481894 -116603638 + FRAM SINE Alu 2 170 -6 3604 170 63 10 chr5 86481936 86482635 -116602897 - L1MB4 LINE L1 -1 6179 5444 24 0 0 0 chr5 86483229 86483253 -116602279 + AT_rich Low_complexity Low_complexity 1 24 0 1204 70 13 6 chr5 86484019 86484177 -116601355 - L1PA7 LINE L1 -4 6150 5992 22 0 0 0 chr5 86484185 86484207 -116601325 + AT_rich Low_complexity Low_complexity 1 22 0 1952 130 3 3 chr5 86485249 86485534 -116599998 - L1PA16 LINE L1 -9 6157 5873 1102 175 42 23 chr5 86485618 86485835 -116599697 - MLT1A1 LTR MaLR 0 365 145 872 178 0 13 chr5 86485928 86486085 -116599447 - MLT1A1 LTR MaLR -210 155 1 246 301 113 43 chr5 86486085 86486341 -116599191 + L2 LINE L2 2220 2493 -821 2497 63 0 13 chr5 86491535 86491838 -116593694 + AluY SINE Alu 1 299 -12 410 226 82 19 chr5 86492414 86492573 -116592959 - L1ME4a LINE L1 -1 6120 5952 358 252 129 14 chr5 86492679 86492818 -116592714 - L1ME4a LINE L1 -4 6117 5963 513 294 72 43 chr5 86493412 86493688 -116591844 - L1ME4a LINE L1 -362 5759 5476 307 258 155 84 chr5 86494058 86494271 -116591261 - MIR SINE MIR 0 262 35 481 333 70 9 chr5 86494942 86495170 -116590362 + MIR SINE MIR 6 247 -15 234 350 101 8 chr5 86495269 86495506 -116590026 + L2 LINE L2 2347 2605 -709 21 36 0 0 chr5 86497853 86497881 -116587651 + AT_rich Low_complexity Low_complexity 1 28 0 1610 146 32 0 chr5 86501186 86501432 -116584100 - AluJo SINE Alu -17 295 42 556 230 230 32 chr5 86501509 86501696 -116583836 + MER58A DNA MER1_type 1 224 0 2251 88 10 0 chr5 86502246 86502540 -116582992 + AluSc SINE Alu 1 297 -12 264 213 385 0 chr5 86503392 86503514 -116582018 + MIR SINE MIR 12 180 -82 25 31 0 0 chr5 86504861 86504893 -116580639 + AT_rich Low_complexity Low_complexity 1 32 0 245 269 15 0 chr5 86505153 86505220 -116580312 + MER116 DNA Mariner 12 79 -1 489 256 0 29 chr5 86505223 86505360 -116580172 + L2 LINE L2 3171 3303 -10 1124 264 134 14 chr5 86508563 86508980 -116576552 + L2 LINE L2 2054 2520 -794 1009 251 44 88 chr5 86508970 86509377 -116576155 + L2 LINE L2 2925 3313 0 * 903 232 98 0 chr5 86511084 86511308 -116574224 - MIR SINE MIR -15 247 2 256 281 104 52 chr5 86512770 86512866 -116572666 - L2 LINE L2 -12 3260 3160 703 192 131 0 chr5 86513351 86513481 -116572051 - FAM SINE Alu -26 159 13 2292 93 3 3 chr5 86515191 86515491 -116570041 + AluSq SINE Alu 1 300 -13 25 0 0 0 chr5 86515594 86515619 -116569913 + AT_rich Low_complexity Low_complexity 1 25 0 600 270 35 11 chr5 86517552 86517726 -116567806 - MIR SINE MIR -4 258 81 2089 142 3 0 chr5 86518823 86519133 -116566399 + AluSx SINE Alu 1 311 -1 342 67 0 0 chr5 86519706 86519751 -116565781 + (CA)n Simple_repeat Simple_repeat 2 46 0 342 339 48 24 chr5 86519917 86520085 -116565447 - MIR3 SINE MIR -3 205 34 24 53 0 0 chr5 86521832 86521870 -116563662 + GC_rich Low_complexity Low_complexity 1 38 0 357 263 207 10 chr5 86523674 86523872 -116561660 + MIR SINE MIR 15 251 -11 1916 118 47 10 chr5 86524531 86524828 -116560704 - AluSx SINE Alu -4 308 1 2419 126 34 22 chr5 86525326 86525682 -116559850 + THE1B LTR MaLR 1 360 -4 921 254 94 70 chr5 86526625 86527209 -116558323 - L1MC4 LINE L1 -17 8025 7324 353 180 113 87 chr5 86527388 86527538 -116557994 + MER5A DNA MER1_type 4 157 -32 668 171 207 88 chr5 86528136 86528329 -116557203 + MER20 DNA MER1_type 4 219 0 3024 77 6 0 chr5 86529216 86529578 -116555954 - THE1B LTR MaLR 0 364 1 543 122 0 0 chr5 86530063 86530137 -116555395 + AluS SINE Alu 2 75 -238 633 255 123 10 chr5 86531307 86531511 -116554021 + MIR SINE MIR 32 258 -4 388 258 13 12 chr5 86531689 86531841 -116553691 + MIR SINE MIR 14 147 -61 286 299 31 46 chr5 86532032 86532226 -116553306 + MIR3 SINE MIR 2 192 -16 25 0 0 0 chr5 86533296 86533321 -116552211 + AT_rich Low_complexity Low_complexity 1 25 0 1773 124 31 10 chr5 86533937 86534228 -116551304 + AluSx SINE Alu 1 297 -15 305 82 20 0 chr5 86534864 86534913 -116550619 + (TG)n Simple_repeat Simple_repeat 2 51 0 1973 135 0 3 chr5 86536235 86536539 -116548993 + AluSx SINE Alu 1 303 -9 935 229 32 0 chr5 86536757 86536945 -116548587 - MER20 DNA MER1_type 0 219 26 605 268 76 25 chr5 86536997 86537195 -116548337 + MIR SINE MIR 54 261 -1 207 0 0 0 chr5 86539140 86539163 -116546369 + (T)n Simple_repeat Simple_repeat 1 23 0 2305 130 21 0 chr5 86540010 86540340 -116545192 + MER1B DNA MER1_type 1 337 0 253 115 328 0 chr5 86540493 86540554 -116544978 - MIR SINE MIR -66 196 116 1628 165 10 30 chr5 86540776 86541079 -116544453 + AluJo SINE Alu 3 299 -13 881 10 0 0 chr5 86541336 86541436 -116544096 + AluYb8 SINE Alu 206 305 -13 41 0 0 0 chr5 86541943 86541984 -116543548 + AT_rich Low_complexity Low_complexity 1 41 0 313 183 33 0 chr5 86542718 86542778 -116542754 + MLT1L LTR MaLR 3 64 -551 484 202 56 56 chr5 86542781 86543264 -116542268 - MER96B DNA MER1_type? -3 414 237 715 178 31 31 chr5 86542814 86542910 -116542622 + MER96B DNA MER1_type? 43 137 -280 2218 82 3 13 chr5 86542910 86543216 -116542316 + AluSp SINE Alu 1 303 -10 715 178 31 31 chr5 86543216 86543411 -116542121 + MER96B DNA MER1_type? 137 417 0 448 288 127 71 chr5 86543452 86543546 -116541986 + MLT1J LTR MaLR 100 187 -324 1705 148 3 17 chr5 86543546 86543704 -116541828 - AluJb SINE Alu -21 291 137 2245 101 3 0 chr5 86543704 86544000 -116541532 - AluSx SINE Alu -15 297 1 1705 148 3 17 chr5 86544000 86544131 -116541401 - AluJb SINE Alu -175 137 6 448 288 127 71 chr5 86544131 86544390 -116541142 + MLT1J LTR MaLR 187 473 -38 503 234 19 0 chr5 86548754 86548861 -116536671 + MER5A DNA MER1_type 4 112 -77 442 273 83 0 chr5 86549726 86549847 -116535685 - MER117 DNA MER1_type 0 197 67 271 236 0 0 chr5 86549892 86549947 -116535585 + MER5A DNA MER1_type 129 183 -6 536 272 19 48 chr5 86550108 86550314 -116535218 + Charlie8 DNA MER1_type 75 274 -2143 196 327 40 40 chr5 86550679 86550780 -116534752 + MIR SINE MIR 8 108 -154 1423 202 42 46 chr5 86550783 86551148 -116534384 + MLT1A1 LTR MaLR 1 429 -3 259 261 131 31 chr5 86551182 86551312 -116534220 + MIR SINE MIR 117 259 -3 209 261 21 99 chr5 86554356 86554498 -116531034 + L2 LINE L2 2966 3096 -176 1676 204 182 36 chr5 86554654 86555188 -116530344 + LTR9 LTR ERV1 1 612 0 234 279 108 63 chr5 86555997 86556108 -116529424 + L2 LINE L2 3151 3266 -6 243 88 0 0 chr5 86556529 86556563 -116528969 + (CA)n Simple_repeat Simple_repeat 2 35 0 425 232 232 10 chr5 86558157 86558355 -116527177 + MIR SINE MIR 20 261 -1 181 208 132 0 chr5 86560198 86560251 -116525281 - L3 LINE CR1 -215 1362 1303 915 269 89 49 chr5 86560743 86561229 -116524303 - MLT1H LTR MaLR 0 549 1 310 271 37 28 chr5 86561314 86561421 -116524111 - MER103 DNA DNA -25 141 34 1914 134 0 0 chr5 86562331 86562647 -116522885 - AluSx SINE Alu 0 316 1 3639 112 84 26 chr5 86563349 86563911 -116521621 + MER39B LTR ERV1 1 604 -49 2443 60 0 0 chr5 86563911 86564209 -116521323 - AluY SINE Alu -13 298 1 3639 112 84 26 chr5 86564209 86564263 -116521269 + MER39B LTR ERV1 604 653 0 273 323 97 12 chr5 86564903 86565151 -116520381 + L2 LINE L2 2823 3091 -181 873 258 131 11 chr5 86566087 86566362 -116519170 + LTR16C LTR ERVL 182 489 -2 377 306 121 39 chr5 86568093 86568299 -116517233 + L1ME4a LINE L1 5320 5542 -2266 448 311 110 42 chr5 86568331 86568595 -116516937 + L1ME4a LINE L1 5672 5953 -168 570 66 0 0 chr5 86568739 86568815 -116516717 - L1PA5 LINE L1 -4 6150 6075 24 53 0 0 chr5 86569940 86569978 -116515554 + AT_rich Low_complexity Low_complexity 1 38 0 810 145 24 0 chr5 86570291 86570415 -116515117 - FLAM_A SINE Alu -6 127 1 210 348 150 5 chr5 86570592 86570779 -116514753 + L2 LINE L2 1334 1547 -1767 313 220 54 173 chr5 86571051 86571219 -116514313 - L2 LINE L2 0 3272 3125 1375 188 71 8 chr5 86572669 86573037 -116512495 - MER3 DNA MER1_type 0 2624 2234 514 180 23 78 chr5 86573039 86573167 -116512365 - MER3 DNA MER1_type -47 162 42 263 243 10 68 chr5 86573545 86573648 -116511884 - MIR SINE MIR -127 135 39 1431 136 0 0 chr5 86574223 86574436 -116511096 + AluSg/x SINE Alu 94 306 -6 29 47 0 0 chr5 86575099 86575142 -116510390 + AT_rich Low_complexity Low_complexity 1 43 0 2113 115 0 16 chr5 86575191 86575495 -116510037 + AluSx SINE Alu 1 299 -13 183 339 0 0 chr5 86577467 86577523 -116508009 - MIR SINE MIR -68 140 85 2177 87 21 0 chr5 86578247 86578534 -116506998 - AluSx SINE Alu -18 294 2 497 271 58 7 chr5 86579372 86579527 -116506005 - MIR SINE MIR -50 212 50 278 301 36 48 chr5 86579516 86579718 -116505814 - MIR SINE MIR -44 218 19 * 301 288 41 75 chr5 86580323 86580469 -116505063 + L3 LINE CR1 1285 1425 -152 240 237 137 50 chr5 86580699 86580838 -116504694 - MIR SINE MIR -110 152 2 253 403 8 0 chr5 86581869 86581988 -116503544 + L2 LINE L2 3152 3271 -1 356 102 0 17 chr5 86582388 86582447 -116503085 + (TA)n Simple_repeat Simple_repeat 2 59 0 239 214 128 68 chr5 86583417 86583534 -116501998 + L2 LINE L2 2976 3099 -214 358 255 14 50 chr5 86583641 86583782 -116501750 + L2 LINE L2 3174 3309 -4 303 287 21 11 chr5 86584189 86584283 -116501249 + L1MC4 LINE L1 6609 6703 -1339 237 178 0 0 chr5 86584283 86584328 -116501204 + (TA)n Simple_repeat Simple_repeat 1 45 0 1912 134 28 7 chr5 86584546 86584830 -116500702 - MER1B DNA MER1_type 0 339 50 278 211 211 35 chr5 86586711 86586853 -116498679 - MIR3 SINE MIR -19 189 23 2422 80 0 7 chr5 86587044 86587346 -116498186 + AluSc SINE Alu 1 300 -9 350 158 19 0 chr5 86587679 86587747 -116497785 - Alu SINE Alu -10 292 240 2575 50 0 0 chr5 86587791 86588092 -116497440 + AluY SINE Alu 1 301 -10 387 127 0 0 chr5 86588539 86588602 -116496930 - L1PA15 LINE L1 0 6165 6103 214 176 39 20 chr5 86589127 86589178 -116496354 - L3b LINE CR1 -115 1468 1417 324 0 0 0 chr5 86590363 86590399 -116495133 + (CA)n Simple_repeat Simple_repeat 1 36 0 207 167 0 0 chr5 86591010 86591052 -116494480 + GA-rich Low_complexity Low_complexity 1 42 0 42497 35 33 5 chr5 86591119 86596773 -116488759 - L1PA3 LINE L1 0 6155 318 2868 13 0 3 chr5 86596773 86597084 -116488448 - AluYa5 SINE Alu -1 310 1 42497 35 33 5 chr5 86597084 86597412 -116488120 - L1PA3 LINE L1 -5837 318 1 195 42 0 0 chr5 86597467 86597491 -116488041 + (CAT)n Simple_repeat Simple_repeat 3 26 0 508 271 79 17 chr5 86597494 86597618 -116487914 - MIR SINE MIR -13 249 109 201 39 0 0 chr5 86597618 86597644 -116487888 + (TTGGGG)n Simple_repeat Simple_repeat 2 27 0 508 271 79 17 chr5 86597644 86597696 -116487836 - MIR SINE MIR -153 109 62 303 245 47 19 chr5 86597963 86598069 -116487463 + MIR SINE MIR 89 197 -65 872 177 0 24 chr5 86599949 86600113 -116485419 - FRAM SINE Alu -17 159 1 229 230 60 70 chr5 86600196 86600296 -116485236 + MIR SINE MIR 37 135 -73 510 221 38 15 chr5 86600474 86600605 -116484927 + MIR SINE MIR 97 230 -32 283 189 315 21 chr5 86600750 86600893 -116484639 - MIR SINE MIR -57 205 21 2225 98 7 7 chr5 86600966 86601261 -116484271 + AluSc SINE Alu 1 295 -14 289 307 51 29 chr5 86601494 86601631 -116483901 + L2 LINE L2 3133 3272 0 234 0 0 0 chr5 86601979 86602005 -116483527 + (CAA)n Simple_repeat Simple_repeat 2 27 0 243 0 0 0 chr5 86604448 86604475 -116481057 + (CA)n Simple_repeat Simple_repeat 2 28 0 243 0 0 0 chr5 86604505 86604532 -116481000 + (CA)n Simple_repeat Simple_repeat 2 28 0 884 133 96 0 chr5 86604640 86604806 -116480726 + L1MB3 LINE L1 6000 6181 -2 366 218 142 7 chr5 86605796 86605935 -116479597 - MIR SINE MIR -68 194 31 181 188 0 0 chr5 86606110 86606142 -116479390 + MIR SINE MIR 77 108 -154 1688 184 3 13 chr5 86607286 86607585 -116477947 - AluJo SINE Alu -8 304 9 224 324 9 19 chr5 86608826 86608934 -116476598 - MER5B DNA MER1_type -3 175 69 * 315 291 52 64 chr5 86608932 86609104 -116476428 + MIR3 SINE MIR 16 185 -23 230 173 2 53 chr5 86609620 86609685 -116475847 - MER5B DNA MER1_type -14 175 102 1791 243 81 40 chr5 86609870 86610426 -116475106 + MER119 DNA MER1_type 5 583 0 2124 87 14 38 chr5 86611096 86611384 -116474148 - AluSq SINE Alu -32 281 1 22 0 0 0 chr5 86612131 86612153 -116473379 + AT_rich Low_complexity Low_complexity 1 22 0 2293 104 3 0 chr5 86612224 86612522 -116473010 + AluSp SINE Alu 1 299 -14 350 204 52 81 chr5 86614560 86614653 -116470879 - MIR SINE MIR -12 250 162 2218 92 0 11 chr5 86614653 86614969 -116470563 - AluSc SINE Alu 0 313 1 350 204 52 81 chr5 86614969 86615046 -116470486 - MIR SINE MIR -100 162 84 750 153 16 8 chr5 86615376 86615500 -116470032 + FLAM_C SINE Alu 2 126 -17 21 0 0 0 chr5 86615509 86615530 -116470002 + AT_rich Low_complexity Low_complexity 1 21 0 337 271 54 16 chr5 86615531 86615660 -116469872 + L1ME LINE L1 5689 5822 -299 721 193 0 0 chr5 86615672 86615786 -116469746 + AluJo/FLAM SINE Alu 2 115 -197 275 111 0 0 chr5 86615786 86615822 -116469710 + FLAM SINE Alu 88 123 -10 2340 78 3 26 chr5 86615973 86616282 -116469250 + AluSx SINE Alu 1 302 -10 2116 102 14 7 chr5 86618458 86618742 -116466790 - AluSx SINE Alu -14 298 13 2329 93 0 7 chr5 86618889 86619190 -116466342 - AluSq SINE Alu -14 299 1 2421 81 0 0 chr5 86620428 86620725 -116464807 + AluY SINE Alu 1 297 -14 496 214 116 66 chr5 86620772 86620959 -116464573 + L1ME4a LINE L1 5539 5752 -390 2125 112 44 0 chr5 86620959 86621254 -116464278 + AluSx SINE Alu 1 308 -4 496 214 116 66 chr5 86621254 86621354 -116464178 + L1ME4a LINE L1 5752 5846 -296 231 254 0 0 chr5 86622518 86622573 -116462959 + C-rich Low_complexity Low_complexity 5 59 0 343 257 128 0 chr5 86625245 86625354 -116460178 + MIR SINE MIR 96 218 -44 290 290 65 36 chr5 86625509 86625664 -116459868 + MIR SINE MIR 8 169 -39 699 212 62 6 chr5 86626585 86626764 -116458768 - MIR SINE MIR -67 195 7 2278 80 3 3 chr5 86627914 86628200 -116457332 - AluY SINE Alu -21 290 5 2409 97 0 3 chr5 86628797 86629107 -116456425 - AluSq SINE Alu -4 309 1 25 0 0 0 chr5 86629577 86629602 -116455930 + AT_rich Low_complexity Low_complexity 1 25 0 2226 107 10 3 chr5 86629698 86629996 -116455536 + AluSx SINE Alu 1 300 -12 1356 220 84 37 chr5 86630107 86630512 -116455020 - MLT1H1 LTR MaLR -65 490 67 1679 164 0 7 chr5 86630807 86631093 -116454439 - AluJb SINE Alu -16 296 13 23 0 0 0 chr5 86631255 86631278 -116454254 + AT_rich Low_complexity Low_complexity 1 23 0 7739 20 0 5 chr5 86631278 86632169 -116453363 - L1PA3 LINE L1 0 6155 5269 664 229 8 96 chr5 86632309 86632549 -116452983 + MER20 DNA MER1_type 1 219 0 718 84 0 0 chr5 86632747 86632842 -116452690 - AluSg/x SINE Alu -14 296 202 678 295 69 9 chr5 86634125 86634342 -116451190 - MIR SINE MIR -19 243 14 1661 77 14 0 chr5 86636571 86636792 -116448740 - AluSq SINE Alu -1 312 89 234 0 0 0 chr5 86636984 86637010 -116448522 + (CA)n Simple_repeat Simple_repeat 2 27 0 304 269 76 50 chr5 86637489 86637608 -116447924 - L2 LINE L2 -2 3270 3149 276 264 14 0 chr5 86637611 86637683 -116447849 + MIR3 SINE MIR 121 193 -15 2199 103 0 0 chr5 86638576 86638886 -116446646 + AluSq SINE Alu 1 310 -3 286 255 75 9 chr5 86639351 86639457 -116446075 + MIR SINE MIR 52 164 -98 2172 125 0 0 chr5 86643431 86643743 -116441789 + AluSx SINE Alu 1 312 0 241 270 183 17 chr5 86644288 86644403 -116441129 + MIR SINE MIR 33 166 -96 306 313 142 30 chr5 86644413 86644745 -116440787 - L2 LINE L2 -26 3287 2919 644 199 37 0 chr5 86645189 86645325 -116440207 + MER5A DNA MER1_type 35 175 -14 208 139 0 28 chr5 86646353 86646389 -116439143 + L2 LINE L2 3138 3172 -100 231 269 0 0 chr5 86646492 86646544 -116438988 - MIR SINE MIR -91 117 66 2369 50 0 10 chr5 86647298 86647617 -116437915 + AluY SINE Alu 1 311 0 297 89 0 0 chr5 86647766 86647811 -116437721 + (CA)n Simple_repeat Simple_repeat 1 45 0 336 267 51 55 chr5 86648823 86648988 -116436544 + MER5A DNA MER1_type 4 183 -6 440 256 160 13 chr5 86649485 86649641 -116435891 + MER5A DNA MER1_type 10 188 -1 2166 100 3 3 chr5 86649850 86650160 -116435372 + AluY SINE Alu 1 310 -1 549 328 114 23 chr5 86650528 86650879 -116434653 + L3 LINE CR1 679 1061 -516 243 0 0 0 chr5 86651110 86651137 -116434395 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 357 197 139 0 chr5 86652392 86652514 -116433018 - L1ME4a LINE L1 -16 6105 5967 297 0 0 0 chr5 86653684 86653717 -116431815 + (CA)n Simple_repeat Simple_repeat 2 34 0 1943 170 32 49 chr5 86653721 86654091 -116431441 - MLT1A2 LTR MaLR -10 364 1 268 270 109 35 chr5 86654429 86654603 -116430929 + L2 LINE L2 2230 2416 -898 2128 119 0 3 chr5 86655556 86655859 -116429673 + AluSx SINE Alu 1 302 -10 204 170 0 38 chr5 86656043 86656096 -116429436 + CT-rich Low_complexity Low_complexity 2 52 0 358 308 83 0 chr5 86657026 86657159 -116428373 + L2 LINE L2 3170 3313 0 447 19 0 0 chr5 86657318 86657370 -116428162 + (CA)n Simple_repeat Simple_repeat 1 52 0 1950 128 0 7 chr5 86657370 86657660 -116427872 - AluSg SINE Alu -22 288 1 405 302 101 0 chr5 86658160 86658319 -116427213 - MIR SINE MIR 0 262 88 251 328 6 6 chr5 86660386 86660489 -116425043 + G-rich Low_complexity Low_complexity 3 180 0 41 72 0 0 chr5 86660656 86660739 -116424793 + GC_rich Low_complexity Low_complexity 1 83 0 2165 104 7 13 chr5 86662774 86662910 -116422622 + AluSx SINE Alu 1 136 -176 2209 99 3 0 chr5 86662910 86663214 -116422318 + AluSc SINE Alu 1 305 -4 2165 104 7 13 chr5 86663214 86663385 -116422147 + AluSx SINE Alu 136 306 -6 510 136 27 82 chr5 86663396 86663506 -116422026 - L2 LINE L2 -5 3308 3205 1930 94 91 0 chr5 86664542 86664828 -116420704 - AluSx SINE Alu 0 312 1 1978 130 0 0 chr5 86667201 86667528 -116418004 + AluSx SINE Alu 1 327 0 605 288 99 31 chr5 86668061 86668217 -116417315 + MIR SINE MIR 20 197 -65 180 0 0 0 chr5 86668217 86668237 -116417295 + (TTA)n Simple_repeat Simple_repeat 1 20 0 605 288 99 31 chr5 86668237 86668302 -116417230 + MIR SINE MIR 197 256 -6 4943 165 22 21 chr5 86668399 86669831 -116415701 + L1MB7 LINE L1 4739 6165 -19 279 292 208 0 chr5 86669895 86669991 -116415541 - L2 LINE L2 -9 3263 3148 430 283 158 49 chr5 86670368 86670633 -116414899 - L2 LINE L2 -454 2860 2567 3967 174 64 59 chr5 86672514 86672749 -116412783 + L1MB7 LINE L1 4951 5183 -1001 1134 104 25 0 chr5 86672749 86672912 -116412620 + L1PA10 LINE L1 5998 6164 -4 3967 174 64 59 chr5 86672912 86672944 -116412588 + L1MB7 LINE L1 5183 5213 -971 1454 171 36 40 chr5 86672944 86673248 -116412284 + AluJo SINE Alu 4 306 -6 3967 174 64 59 chr5 86673248 86673842 -116411690 + L1MB7 LINE L1 5213 5808 -376 1873 108 0 52 chr5 86673842 86674147 -116411385 + AluSx SINE Alu 4 292 -20 3967 174 64 59 chr5 86674147 86674465 -116411067 + L1MB7 LINE L1 5808 6123 -61 1933 169 27 27 chr5 86674465 86674480 -116411052 - Charlie1 DNA MER1_type -133 2628 2614 1425 157 16 0 chr5 86674480 86674722 -116410810 + L1PA16 LINE L1 5913 6158 -8 1933 169 27 27 chr5 86674722 86675157 -116410375 - Charlie1 DNA MER1_type -146 2615 2178 1478 139 40 137 chr5 86675342 86675567 -116409965 - MER2 DNA MER2_type 0 344 169 1617 179 0 4 chr5 86675567 86675840 -116409692 + AluJb SINE Alu 2 273 -39 1478 139 40 137 chr5 86675840 86675994 -116409538 - MER2 DNA MER2_type -175 169 2 2157 114 0 0 chr5 86676654 86676951 -116408581 + AluSx SINE Alu 1 297 -15 600 232 133 75 chr5 86677047 86677288 -116408244 + MIR SINE MIR 8 262 0 375 285 93 51 chr5 86677296 86677510 -116408022 + MIR SINE MIR 36 258 -4 1729 197 0 0 chr5 86678697 86679007 -116406525 - AluJo SINE Alu -2 310 1 2036 122 0 0 chr5 86679082 86679377 -116406155 + AluSx SINE Alu 1 295 -17 189 74 0 0 chr5 86679560 86679587 -116405945 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 298 230 9 9 chr5 86679655 86679768 -116405764 + CT-rich Low_complexity Low_complexity 3 115 0 207 0 0 0 chr5 86680027 86680050 -116405482 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1698 155 3 14 chr5 86680052 86680342 -116405190 - AluJb SINE Alu -25 287 1 259 237 17 0 chr5 86680844 86680903 -116404629 + L3 LINE CR1 1244 1303 -274 1680 170 0 7 chr5 86680929 86681200 -116404332 + AluJb SINE Alu 6 274 -38 881 141 6 17 chr5 86681204 86681381 -116404151 + GA-rich Low_complexity Low_complexity 4 178 0 242 54 0 27 chr5 86681387 86681424 -116404108 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 283 143 0 0 chr5 86681424 86681466 -116404066 + (GGAAA)n Simple_repeat Simple_repeat 3 44 0 1453 177 13 46 chr5 86681684 86681810 -116403722 + AluJo SINE Alu 1 130 -182 2393 51 10 3 chr5 86681810 86682106 -116403426 - AluY SINE Alu -13 298 1 1453 177 13 46 chr5 86682106 86682284 -116403248 + AluJo SINE Alu 130 295 -17 263 331 60 23 chr5 86682583 86682716 -116402816 + L3b LINE CR1 1216 1353 -230 391 269 8 50 chr5 86682853 86682972 -116402560 + L2 LINE L2 3145 3258 -14 2183 106 3 3 chr5 86683027 86683328 -116402204 - AluSx SINE Alu 0 312 12 2352 147 0 6 chr5 86684592 86684952 -116400580 - L1PB1 LINE L1 -1 6150 5793 402 21 0 0 chr5 86684952 86684999 -116400533 + (TG)n Simple_repeat Simple_repeat 1 47 0 196 146 37 24 chr5 86685264 86685346 -116400186 + (TA)n Simple_repeat Simple_repeat 2 84 0 5448 170 30 9 chr5 86685350 86686896 -116398636 - L1PB1 LINE L1 -413 5738 4161 2125 108 0 3 chr5 86686966 86687252 -116398280 - AluSx SINE Alu -6 306 22 239 273 26 0 chr5 86688083 86688160 -116397372 - MIR SINE MIR -55 207 129 250 247 140 11 chr5 86688195 86688288 -116397244 - L2 LINE L2 -6 3307 3203 1647 158 106 12 chr5 86688868 86689197 -116396335 + MER46B DNA MER2_type 1 235 -1 222 254 224 67 chr5 86690265 86690399 -116395133 + MER5A DNA MER1_type 16 170 -19 2128 98 0 18 chr5 86690582 86690894 -116394638 + AluSx SINE Alu 1 307 0 439 278 0 0 chr5 86691584 86691681 -116393851 + MIR SINE MIR 46 142 -66 309 175 53 18 chr5 86691681 86691795 -116393737 + (TA)n Simple_repeat Simple_repeat 1 118 0 189 145 12 48 chr5 86691835 86691918 -116393614 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 306 207 33 33 chr5 86691920 86691941 -116393591 + (TA)n Simple_repeat Simple_repeat 1 21 -129 1883 139 7 4 chr5 86691941 86692222 -116393310 + AluSx SINE Alu 1 282 -30 306 207 33 33 chr5 86692222 86692350 -116393182 + (TA)n Simple_repeat Simple_repeat 20 150 0 25 65 0 0 chr5 86692540 86692586 -116392946 + AT_rich Low_complexity Low_complexity 1 46 0 43392 56 5 0 chr5 86693739 86699854 -116385678 + L1PA5 LINE L1 11 6154 0 2190 123 0 0 chr5 86699933 86700234 -116385298 + AluSg SINE Alu 1 301 -9 231 143 0 175 chr5 86700370 86700433 -116385099 - MIR SINE MIR -61 147 96 499 292 49 41 chr5 86700622 86700865 -116384667 - MIR SINE MIR 0 262 18 2435 91 3 0 chr5 86700877 86701184 -116384348 + AluSp SINE Alu 1 308 -5 1086 186 4 106 chr5 86701286 86701550 -116383982 + L1ME LINE L1 5528 5764 -402 1257 119 23 0 chr5 86701550 86701726 -116383806 + AluSg/x SINE Alu 120 299 -13 2189 139 46 22 chr5 86701785 86702151 -116383381 + THE1C LTR MaLR 1 375 0 216 307 61 79 chr5 86702161 86702275 -116383257 - MER5A DNA MER1_type -25 164 53 285 249 54 113 chr5 86702791 86702976 -116382556 + L3 LINE CR1 1206 1379 -198 687 241 90 19 chr5 86702983 86703195 -116382337 + MIR SINE MIR 20 246 -16 2085 125 14 14 chr5 86703892 86704187 -116381345 + AluSx SINE Alu 1 295 -17 808 174 0 23 chr5 86704322 86704454 -116381078 + AluJo SINE Alu 6 134 -178 3179 246 102 56 chr5 86704467 86706006 -116379526 + HAL1 LINE L1 163 1772 -735 2042 140 0 0 chr5 86706034 86706313 -116379219 + AluSp SINE Alu 1 279 -34 207 0 0 0 chr5 86706316 86706339 -116379193 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 331 316 99 47 chr5 86706340 86706511 -116379021 + LTR16A LTR ERVL 19 198 -252 437 244 187 60 chr5 86706764 86706981 -116378551 + HAL1 LINE L1 1920 2108 -399 1897 141 37 13 chr5 86706981 86707280 -116378252 - AluSx SINE Alu -6 306 1 437 244 187 60 chr5 86707280 86707549 -116377983 + HAL1 LINE L1 2108 2468 -39 24 0 0 0 chr5 86707561 86707585 -116377947 + AT_rich Low_complexity Low_complexity 1 24 0 2620 101 19 25 chr5 86707799 86708165 -116377367 + THE1B LTR MaLR 1 364 0 1877 195 105 27 chr5 86708589 86708920 -116376612 - L1MD2 LINE L1 -408 5951 5575 2044 142 3 0 chr5 86708920 86709231 -116376301 + AluSx SINE Alu 1 312 0 1877 195 105 27 chr5 86709231 86709345 -116376187 - L1MD2 LINE L1 -784 5575 5471 2121 114 10 13 chr5 86709428 86709734 -116375798 + AluSx SINE Alu 1 305 -7 733 249 64 0 chr5 86709872 86710045 -116375487 + MER63A DNA MER1_type 27 210 0 414 0 0 0 chr5 86710089 86710135 -116375397 + (CA)n Simple_repeat Simple_repeat 1 46 0 2063 171 104 36 chr5 86710135 86710604 -116374928 + MLT1D LTR MaLR 2 502 -3 243 0 0 0 chr5 86710604 86710631 -116374901 + (CA)n Simple_repeat Simple_repeat 2 28 0 349 274 75 14 chr5 86710732 86710828 -116374704 - L1ME3A LINE L1 -284 5886 5797 2266 110 0 0 chr5 86710828 86711127 -116374405 + AluY SINE Alu 1 299 -12 468 0 0 0 chr5 86711128 86711180 -116374352 + (TA)n Simple_repeat Simple_repeat 1 52 0 349 274 75 14 chr5 86711180 86711227 -116374305 - L1ME3A LINE L1 -372 5798 5732 226 256 0 0 chr5 86712130 86712173 -116373359 - L1ME3A LINE L1 -2178 5630 5588 2320 106 0 0 chr5 86712684 86712977 -116372555 - AluSx SINE Alu -19 293 1 2213 119 0 22 chr5 86713108 86713427 -116372105 - AluSx SINE Alu 0 312 1 2088 147 0 3 chr5 86714297 86714610 -116370922 - AluJo SINE Alu 0 312 1 551 271 70 56 chr5 86715352 86715782 -116369750 + L1MC/D LINE L1 5265 5313 -867 471 136 159 0 chr5 86715788 86715876 -116369656 + FLAM_C SINE Alu 4 105 -38 738 223 18 0 chr5 86715895 86716061 -116369471 + MIR SINE MIR 46 214 -48 32 26 0 0 chr5 86716139 86716178 -116369354 + AT_rich Low_complexity Low_complexity 1 39 0 1993 129 13 10 chr5 86716193 86716496 -116369036 + AluSx SINE Alu 1 304 -8 378 106 69 28 chr5 86716496 86716818 -116368714 + (TA)n Simple_repeat Simple_repeat 1 335 0 514 221 59 107 chr5 86717072 86717245 -116368287 - L1MD2 LINE L1 -4 6355 6196 2316 106 3 0 chr5 86717245 86717547 -116367985 + AluSx SINE Alu 1 303 -9 514 221 59 107 chr5 86717547 86717626 -116367906 - L1MD2 LINE L1 -163 6196 6115 3601 140 100 19 chr5 86717665 86718285 -116367247 - L1MC1 LINE L1 -2 6331 5662 2677 221 21 54 chr5 86718281 86718990 -116366542 - L1MD2 LINE L1 -224 6135 5450 * 1851 169 3 3 chr5 86719409 86719710 -116365822 - AluJb SINE Alu -6 306 6 291 256 48 24 chr5 86719952 86720077 -116365455 + LTR16C LTR ERVL 352 479 -12 2168 119 0 0 chr5 86720965 86721250 -116364282 - AluSx SINE Alu -21 291 7 45045 38 3 0 chr5 86721577 86727712 -116357820 + L1PA4 LINE L1 2 6152 -3 22 0 0 0 chr5 86727712 86727734 -116357798 + AT_rich Low_complexity Low_complexity 1 22 0 803 360 19 16 chr5 86728369 86728794 -116356738 + HERV16 LTR ERVL 947 1372 -3624 475 221 10 10 chr5 86728806 86728910 -116356622 - LTR40a LTR ERVL -415 104 1 2308 95 0 0 chr5 86729081 86729377 -116356155 - AluSc SINE Alu -13 296 1 311 277 211 29 chr5 86729448 86729690 -116355842 + MLT1H LTR MaLR 43 328 -221 199 282 65 48 chr5 86730172 86730296 -116355236 - L2 LINE L2 -8 3264 3139 325 345 35 7 chr5 86730304 86730446 -116355086 + MIR SINE MIR 8 153 -109 1473 179 131 0 chr5 86731052 86731327 -116354205 + AluSx SINE Alu 1 310 -2 313 176 0 0 chr5 86731327 86731395 -116354137 + A-rich Low_complexity Low_complexity 1 180 0 208 275 8 42 chr5 86732799 86732919 -116352613 + GA-rich Low_complexity Low_complexity 3 118 0 832 279 5 5 chr5 86733554 86733773 -116351759 - MIR SINE MIR -42 220 2 1684 172 10 13 chr5 86734062 86734364 -116351168 - AluJo SINE Alu -9 303 3 2301 105 3 0 chr5 86734433 86734738 -116350794 + AluSc SINE Alu 1 306 -3 2335 102 3 0 chr5 86734749 86735053 -116350479 + AluSp SINE Alu 1 305 -8 2278 114 0 0 chr5 86735536 86735835 -116349697 + AluSx SINE Alu 1 299 -13 194 0 0 37 chr5 86736255 86736282 -116349250 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2062 129 3 13 chr5 86736506 86736817 -116348715 + AluSq SINE Alu 1 308 -5 777 200 0 55 chr5 86736826 86736991 -116348541 + FRAM SINE Alu 1 156 -20 1968 118 0 21 chr5 86737335 86737666 -116347866 - AluSx SINE Alu 0 325 1 234 317 58 0 chr5 86737730 86737850 -116347682 + L3 LINE CR1 1217 1343 -234 2253 127 0 0 chr5 86738039 86738339 -116347193 - AluSx SINE Alu -12 300 1 425 163 0 12 chr5 86738375 86738461 -116347071 + L2 LINE L2 3188 3272 0 2280 144 14 49 chr5 86739453 86739898 -116345634 + L1 LINE L1 4593 5021 -1125 264 122 0 0 chr5 86741175 86741216 -116344316 - MER21A LTR ERV1 -353 578 538 1208 161 40 4 chr5 86741380 86741629 -116343903 + L1MA8 LINE L1 6030 6287 -4 27 0 0 0 chr5 86741637 86741664 -116343868 + AT_rich Low_complexity Low_complexity 1 27 0 1515 84 15 5 chr5 86742153 86742355 -116343177 - AluY SINE Alu -8 303 100 319 209 86 48 chr5 86742359 86742464 -116343068 + MIR SINE MIR 80 188 -74 180 0 0 0 chr5 86742497 86742517 -116343015 + (TTA)n Simple_repeat Simple_repeat 1 20 0 6449 153 25 19 chr5 86742801 86743186 -116342346 + L1P3 LINE L1 7 388 -6073 207 0 0 0 chr5 86743186 86743209 -116342323 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6449 153 25 19 chr5 86743209 86743892 -116341640 + L1P3 LINE L1 388 1082 -5379 4751 223 64 72 chr5 86743992 86745246 -116340286 - L1M2a LINE L1 -5923 1245 2 336 260 94 50 chr5 86746036 86746217 -116339315 + L1ME4a LINE L1 5920 6108 -13 591 271 130 64 chr5 86747427 86747836 -116337696 + MLT1H LTR MaLR 113 548 -1 237 294 0 0 chr5 86748124 86748175 -116337357 + (TG)n Simple_repeat Simple_repeat 1 51 0 2220 98 0 46 chr5 86748302 86748627 -116336905 + AluSx SINE Alu 1 310 -2 432 0 0 0 chr5 86748646 86748694 -116336838 + (TG)n Simple_repeat Simple_repeat 1 48 0 275 277 113 19 chr5 86748714 86748873 -116336659 + MER112 DNA MER1_type 86 259 -1 302 242 50 0 chr5 86748885 86748984 -116336548 - L2 LINE L2 -6 3307 3204 1720 127 4 4 chr5 86750897 86751156 -116334376 + AluSx SINE Alu 54 312 0 515 198 19 0 chr5 86751164 86751270 -116334262 - L1MC/D LINE L1 -781 5578 5471 2132 114 10 13 chr5 86751353 86751659 -116333873 + AluSx SINE Alu 1 305 -7 747 243 64 0 chr5 86751798 86751971 -116333561 + MER63A DNA MER1_type 27 210 0 306 0 0 0 chr5 86752015 86752049 -116333483 + (CA)n Simple_repeat Simple_repeat 1 34 0 1918 171 104 36 chr5 86752049 86752518 -116333014 + MLT1D LTR MaLR 2 502 -3 297 0 0 0 chr5 86752518 86752551 -116332981 + (CA)n Simple_repeat Simple_repeat 2 34 0 335 274 75 14 chr5 86752652 86752748 -116332784 - L1ME3A LINE L1 -284 5886 5797 2282 110 0 0 chr5 86752748 86753047 -116332485 + AluY SINE Alu 1 299 -12 180 0 0 0 chr5 86753048 86753068 -116332464 + (TA)n Simple_repeat Simple_repeat 1 20 0 335 274 75 14 chr5 86753068 86753115 -116332417 - L1ME3A LINE L1 -372 5798 5732 225 256 0 0 chr5 86754018 86754061 -116331471 - L1ME3A LINE L1 -2178 5630 5588 2093 92 0 32 chr5 86754571 86754853 -116330679 - AluSx SINE Alu -19 293 21 23 54 0 0 chr5 86754951 86754988 -116330544 + AT_rich Low_complexity Low_complexity 1 37 0 2326 101 0 7 chr5 86755653 86755959 -116329573 + AluSc SINE Alu 3 306 -3 2090 116 0 3 chr5 86755962 86756278 -116329254 + AluSx SINE Alu 1 315 0 23 0 0 0 chr5 86757546 86757569 -116327963 + AT_rich Low_complexity Low_complexity 1 23 0 2415 104 0 0 chr5 86757690 86757999 -116327533 + AluSc SINE Alu 1 309 0 558 208 31 104 chr5 86758503 86758602 -116326930 + MER45A DNA AcHobo 1 81 -1500 4978 81 5 3 chr5 86758602 86759268 -116326264 - L1MA3 LINE L1 0 6305 5639 558 208 31 104 chr5 86759268 86759360 -116326172 + MER45A DNA AcHobo 81 178 0 1371 188 91 67 chr5 86759991 86760396 -116325136 - MLT1C LTR MaLR 0 467 53 2220 99 0 14 chr5 86761229 86761522 -116324010 - AluSx SINE Alu -4 308 20 366 344 61 5 chr5 86762002 86762214 -116323318 + L1MC4a LINE L1 5039 5262 -884 276 179 179 11 chr5 86762278 86762373 -116323159 + L1MC4a LINE L1 5296 5406 -2402 369 234 57 78 chr5 86762512 86762653 -116322879 + MLT1F1 LTR MaLR 54 191 -404 670 204 91 98 chr5 86762731 86763157 -116322375 + MLT1F1 LTR MaLR 141 567 0 888 151 0 0 chr5 86763291 86763417 -116322115 + AluSq/x SINE Alu 1 126 -186 440 316 96 14 chr5 86763434 86763725 -116321807 + L1MC4a LINE L1 5637 5951 -1857 2620 143 57 7 chr5 86764020 86764757 -116320775 + LTR1B LTR ERV1 14 826 0 523 301 68 17 chr5 86764852 86765028 -116320504 + Charlie2 DNA MER1_type 128 312 -2470 1625 199 126 124 chr5 86765149 86765294 -116320238 + Charlie2 DNA MER1_type 1856 1999 -863 1402 153 130 12 chr5 86765294 86765548 -116319984 - AluSg SINE Alu -26 284 1 1625 199 126 124 chr5 86765548 86765585 -116319947 + Charlie2 DNA MER1_type 1999 2034 -828 1870 146 7 3 chr5 86765585 86765873 -116319659 - AluSx SINE Alu -23 289 1 1625 199 126 124 chr5 86765873 86766041 -116319491 + Charlie2 DNA MER1_type 2034 2200 -662 1726 151 45 10 chr5 86766041 86766333 -116319199 + AluJb SINE Alu 1 302 -10 1625 199 126 124 chr5 86766333 86766888 -116318644 + Charlie2 DNA MER1_type 2200 2752 -110 360 0 0 0 chr5 86766888 86766928 -116318604 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 1645 148 49 4 chr5 86766931 86767194 -116318338 - AluSx SINE Alu -37 275 1 1625 199 126 124 chr5 86767194 86767278 -116318254 + Charlie2 DNA MER1_type 2753 2854 -8 255 211 248 0 chr5 86767284 86767393 -116318139 - MIR3 SINE MIR -37 171 36 372 303 103 13 chr5 86769067 86769367 -116316165 + L2 LINE L2 2936 3262 -51 1837 137 0 43 chr5 86770273 86770573 -116314959 - AluJb SINE Alu -13 299 13 246 343 29 0 chr5 86770735 86770840 -116314692 + L1ME LINE L1 10 117 -5953 1636 166 3 83 chr5 86770857 86771195 -116314337 + AluJo SINE Alu 1 311 -1 512 193 0 0 chr5 86771400 86771488 -116314044 + AluJ/FLAM SINE Alu 2 89 -223 745 225 87 126 chr5 86771518 86771789 -116313743 + L1M4 LINE L1 2269 2549 -3597 1778 134 0 0 chr5 86771789 86772042 -116313490 - AluJb SINE Alu 0 312 60 745 225 87 126 chr5 86772042 86772357 -116313175 + L1M4 LINE L1 2549 2825 -3321 2259 70 0 11 chr5 86772357 86772671 -116312861 + AluY SINE Alu 1 311 0 745 225 87 126 chr5 86772671 86772815 -116312717 + L1M4 LINE L1 2825 2973 -3173 496 231 22 60 chr5 86772840 86773022 -116312510 - HAL1 LINE L1 -219 2288 2114 289 308 136 76 chr5 86773964 86774214 -116311318 - L2 LINE L2 -1 3271 3007 349 258 23 100 chr5 86776616 86776835 -116308697 + MLT1J LTR MaLR 17 259 -252 1948 114 11 11 chr5 86776883 86777186 -116308346 + AluSg SINE Alu 12 314 0 816 216 0 0 chr5 86777377 86777530 -116308002 - FRAM SINE Alu -23 153 1 211 306 31 31 chr5 86777560 86777658 -116307874 - MIR SINE MIR -118 144 47 336 214 24 12 chr5 86777664 86777748 -116307784 + L1ME2 LINE L1 5945 6029 -135 308 289 148 7 chr5 86777827 86777962 -116307570 - MIR SINE MIR -57 205 52 189 0 0 0 chr5 86778080 86778101 -116307431 + (CA)n Simple_repeat Simple_repeat 1 21 0 200 98 0 24 chr5 86778837 86778878 -116306654 + (TG)n Simple_repeat Simple_repeat 1 40 0 407 143 116 116 chr5 86779303 86779445 -116306087 + MER112 DNA MER1_type 29 173 -87 2322 97 0 28 chr5 86779445 86779765 -116305767 - AluSx SINE Alu -1 311 1 407 143 116 116 chr5 86779765 86779811 -116305721 + MER112 DNA MER1_type 172 217 -43 544 316 136 3 chr5 86780053 86780429 -116305103 - L3 LINE CR1 -67 1510 1085 201 230 104 126 chr5 86780520 86780607 -116304925 + MIR3 SINE MIR 49 133 -75 777 188 34 11 chr5 86780607 86780783 -116304749 + L1MB3 LINE L1 6004 6183 0 201 230 104 126 chr5 86780783 86780830 -116304702 + MIR3 SINE MIR 133 180 -28 2302 110 7 0 chr5 86781310 86781611 -116303921 - AluSx SINE Alu -9 303 1 1539 137 93 79 chr5 86782619 86782710 -116302822 + MER7A DNA MER2_type 1 89 -2949 2061 120 3 48 chr5 86782710 86783019 -116302513 - AluSx SINE Alu -13 299 5 1539 137 93 79 chr5 86783019 86783270 -116302262 + MER7A DNA MER2_type 89 346 0 599 285 31 26 chr5 86783930 86784123 -116301409 + MIR SINE MIR 28 221 -41 373 253 77 32 chr5 86784233 86784454 -116301078 - L1MC4 LINE L1 -4 8038 7808 225 154 96 0 chr5 86784429 86784481 -116301051 - L1ME2 LINE L1 0 6164 6108 * 245 282 310 3 chr5 86784732 86785019 -116300513 - L3 LINE CR1 -32 1545 1171 239 269 250 25 chr5 86787140 86787300 -116298232 + MARNA DNA Mariner 43 238 -348 2213 100 0 4 chr5 86787579 86787916 -116297616 + AluSc SINE Alu 1 336 0 1174 167 32 122 chr5 86788205 86788606 -116296926 - MLT1A1 LTR MaLR 0 365 1 188 125 83 62 chr5 86788767 86788815 -116296717 + MIR SINE MIR 157 205 -57 415 319 111 49 chr5 86788976 86789524 -116296008 + L2 LINE L2 1518 2099 -1215 2177 103 0 50 chr5 86790210 86790531 -116295001 - AluSx SINE Alu -7 305 1 213 292 45 22 chr5 86790778 86790867 -116294665 + L2 LINE L2 2994 3084 -188 2047 120 29 0 chr5 86791245 86791577 -116293955 + AluSx SINE Alu 1 340 0 2288 92 34 0 chr5 86791683 86791976 -116293556 - AluSp SINE Alu -10 303 1 1578 174 138 14 chr5 86792347 86792789 -116292743 + LTR54B LTR ERV1 1 497 -1 217 394 56 0 chr5 86795240 86795400 -116290132 - L2 LINE L2 -218 3054 2886 263 259 148 7 chr5 86795411 86795546 -116289986 + L3b LINE CR1 1185 1338 -245 2229 135 0 0 chr5 86795938 86796241 -116289291 + AluSx SINE Alu 3 305 -7 2047 100 14 7 chr5 86796935 86797225 -116288307 - AluSc SINE Alu -13 296 5 1995 143 20 0 chr5 86797401 86797695 -116287837 - AluSx SINE Alu -12 300 1 1714 134 106 0 chr5 86797856 86798135 -116287397 + AluSx SINE Alu 1 306 0 761 58 90 51 chr5 86799402 86799558 -116285974 - MER4C LTR ERV1 0 465 304 1569 112 40 4 chr5 86799558 86799808 -116285724 + AluSx SINE Alu 1 259 -53 2897 69 62 60 chr5 86800156 86800323 -116285209 - MER4C LTR ERV1 0 465 300 2212 116 7 0 chr5 86800323 86800615 -116284917 + AluSx SINE Alu 1 294 -18 2897 69 62 60 chr5 86800615 86800911 -116284621 - MER4C LTR ERV1 -165 300 1 1979 146 0 29 chr5 86802062 86802377 -116283155 - AluJb SINE Alu -6 306 1 2131 56 4 4 chr5 86802509 86802777 -116282755 + AluY SINE Alu 44 311 0 241 278 96 0 chr5 86803616 86803731 -116281801 + L1ME4a LINE L1 5992 6117 -4 2196 157 58 30 chr5 86804109 86804624 -116280908 + MLT2A2 LTR ERVL 1 554 0 1863 138 27 20 chr5 86804631 86804928 -116280604 - AluJb SINE Alu -13 299 1 21 0 0 0 chr5 86805399 86805420 -116280112 + AT_rich Low_complexity Low_complexity 1 21 0 883 142 0 8 chr5 86805420 86805554 -116279978 + FLAM_C SINE Alu 1 133 0 250 246 0 0 chr5 86805577 86805642 -116279890 + MIR SINE MIR 184 248 -14 361 281 90 39 chr5 86805775 86805944 -116279588 - MIR3 SINE MIR -6 256 62 2275 186 147 6 chr5 86806047 86806543 -116278989 + MLT1F1 LTR MaLR 1 566 -1 246 150 0 0 chr5 86806678 86806718 -116278814 - L1MB7 LINE L1 -9 6175 6136 604 220 13 13 chr5 86806728 86806878 -116278654 - L1MB5 LINE L1 -1 6173 6024 2298 110 3 0 chr5 86807003 86807303 -116278229 + AluSx SINE Alu 2 302 -10 1633 179 26 16 chr5 86808172 86808480 -116277052 + AluJo SINE Alu 1 311 -1 510 202 9 37 chr5 86810332 86810441 -116275091 + MER20B DNA MER1_type 70 175 -608 228 200 0 0 chr5 86810728 86810778 -116274754 + CT-rich Low_complexity Low_complexity 2 51 0 257 241 45 18 chr5 86813319 86813431 -116272101 - L1MC4 LINE L1 0 8042 7928 2048 117 0 0 chr5 86813641 86813931 -116271601 + L1M1 LINE L1 5534 5823 -480 1030 254 80 36 chr5 86813937 86814229 -116271303 - L1M4 LINE L1 -2607 3539 3219 2436 84 0 3 chr5 86814229 86814528 -116271004 - AluSg SINE Alu -12 298 1 1030 254 80 36 chr5 86814528 86814684 -116270848 - L1M4 LINE L1 -2927 3219 3071 237 203 31 16 chr5 86814745 86814809 -116270723 - L1M4 LINE L1 -3455 2691 2627 896 224 37 33 chr5 86814975 86815216 -116270316 + MLT1D LTR MaLR 1 242 -263 21 0 0 0 chr5 86815259 86815280 -116270252 + AT_rich Low_complexity Low_complexity 1 21 0 2943 166 22 49 chr5 86815289 86815922 -116269610 - L1MB8 LINE L1 -21 6157 5542 1476 163 79 25 chr5 86815923 86816200 -116269332 - AluJo SINE Alu -16 296 5 759 219 0 12 chr5 86816204 86816368 -116269164 - L1MB8 LINE L1 -1191 4955 4794 414 0 0 0 chr5 86816389 86816435 -116269097 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 630 103 103 0 chr5 86816436 86816533 -116268999 - AluSq/x SINE Alu -194 118 12 493 221 44 15 chr5 86816542 86816678 -116268854 - L1MB8 LINE L1 -1344 4802 4663 1292 167 17 135 chr5 86817881 86818229 -116267303 - AluJo SINE Alu -5 307 1 275 274 111 0 chr5 86818478 86818595 -116266937 - L1ME4a LINE L1 -24 6097 5968 214 277 336 0 chr5 86819024 86819143 -116266389 - MIR SINE MIR 0 262 104 320 274 26 35 chr5 86819158 86819271 -116266261 + L3 LINE CR1 1357 1468 -109 514 255 40 17 chr5 86819511 86819711 -116265821 + MIR SINE MIR 1 245 -17 223 305 24 0 chr5 86819713 86819795 -116265737 + MIR SINE MIR 74 157 -105 192 289 96 39 chr5 86819868 86819972 -116265560 - MIR SINE MIR 0 262 153 1497 97 21 51 chr5 86821225 86821397 -116264135 + MER30 DNA MER1_type 1 166 -64 2223 119 0 0 chr5 86821397 86821692 -116263840 + AluSx SINE Alu 4 298 -14 1497 97 21 51 chr5 86821692 86821756 -116263776 + MER30 DNA MER1_type 166 230 0 259 302 28 9 chr5 86821852 86821958 -116263574 + MIR SINE MIR 97 204 -58 21 0 0 0 chr5 86823179 86823200 -116262332 + AT_rich Low_complexity Low_complexity 1 21 0 209 271 0 29 chr5 86823863 86823933 -116261599 + GA-rich Low_complexity Low_complexity 3 70 0 650 219 137 17 chr5 86824188 86824421 -116261111 + MIR SINE MIR 2 262 0 244 262 0 0 chr5 86825855 86825916 -116259616 + MIR SINE MIR 185 245 -17 1869 64 9 0 chr5 86825953 86826173 -116259359 - AluSc SINE Alu -17 292 71 2765 10 0 3 chr5 86826173 86826468 -116259064 - AluYa5 SINE Alu -14 297 2 594 108 0 0 chr5 86826469 86826552 -116258980 - AluSc SINE Alu -225 84 2 2274 119 0 7 chr5 86829327 86829629 -116255903 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr5 86829894 86829917 -116255615 + AT_rich Low_complexity Low_complexity 1 23 0 500 275 199 34 chr5 86830914 86831270 -116254262 + MLT1J2 LTR MaLR 33 447 -3 502 264 98 114 chr5 86831270 86831771 -116253761 + L2 LINE L2 2821 3313 0 232 293 0 0 chr5 86832000 86832058 -116253474 - MIR3 SINE MIR -32 176 119 262 266 16 0 chr5 86833070 86833134 -116252398 - L2 LINE L2 0 3272 3208 188 306 0 0 chr5 86833142 86833191 -116252341 - L2 LINE L2 -7 3306 3258 488 251 103 41 chr5 86835191 86835364 -116250168 + MIR SINE MIR 18 199 -63 2940 0 0 0 chr5 86837102 86837409 -116248123 + AluYa5 SINE Alu 1 307 -4 604 183 64 146 chr5 86837420 86837748 -116247784 - L1MC5 LINE L1 -48 7913 7613 285 292 47 118 chr5 86838308 86838671 -116246861 - L2 LINE L2 -12 3260 2924 200 306 121 16 chr5 86840426 86840550 -116244982 + L2 LINE L2 3134 3270 -2 351 0 0 0 chr5 86841880 86841919 -116243613 + (CA)n Simple_repeat Simple_repeat 2 40 0 1993 137 7 0 chr5 86842006 86842284 -116243248 + AluJb SINE Alu 9 288 -24 1011 120 74 0 chr5 86842347 86842522 -116243010 - AluSg/x SINE Alu 0 312 125 1379 171 8 0 chr5 86842622 86842856 -116242676 + AluJb SINE Alu 64 299 -13 311 319 150 6 chr5 86843848 86844008 -116241524 + MER5A DNA MER1_type 7 189 0 211 284 459 0 chr5 86844507 86844616 -116240916 - MER91A DNA MER1_type -34 162 4 277 253 176 0 chr5 86845296 86845387 -116240145 + L2 LINE L2 3146 3252 -20 1962 191 129 39 chr5 86845606 86846125 -116239407 + MLT1E2 LTR MaLR 52 617 -9 2068 204 68 36 chr5 86846268 86846739 -116238793 + MLT1E2 LTR MaLR 141 626 0 2079 127 0 29 chr5 86847200 86847516 -116238016 + AluSx SINE Alu 1 307 -5 2017 141 0 7 chr5 86847537 86847821 -116237711 + AluSx SINE Alu 1 282 -30 1353 52 0 35 chr5 86848273 86848447 -116237085 - AluY SINE Alu 0 311 144 192 313 170 9 chr5 86849294 86849406 -116236126 + L2 LINE L2 3125 3254 -18 1608 139 45 112 chr5 86849585 86849972 -116235560 + MLT1A1 LTR MaLR 1 454 -3 1454 102 0 0 chr5 86850063 86850250 -116235282 + AluSg/x SINE Alu 112 298 -14 273 253 113 60 chr5 86850255 86850335 -116235197 + L1MC4a LINE L1 5740 5814 -1994 1224 168 23 0 chr5 86850335 86850549 -116234983 - MER20 DNA MER1_type 0 219 1 273 253 113 60 chr5 86850549 86850618 -116234914 + L1MC4a LINE L1 5814 5897 -1911 2284 118 0 6 chr5 86850797 86851111 -116234421 - AluSq SINE Alu -1 312 1 2398 92 3 0 chr5 86852303 86852609 -116232923 - AluY SINE Alu -4 307 1 1702 168 171 16 chr5 86853566 86853940 -116231592 + MSTB1 LTR MaLR 1 432 0 401 245 11 0 chr5 86854098 86854192 -116231340 + MER5A DNA MER1_type 10 104 -85 2230 124 7 0 chr5 86855711 86856017 -116229515 - AluSg SINE Alu -2 308 1 360 221 131 41 chr5 86856046 86856191 -116229341 - L2 LINE L2 -3 3310 3153 2001 140 0 7 chr5 86856891 86857183 -116228349 - AluSx SINE Alu -22 290 1 446 242 45 38 chr5 86857298 86857430 -116228102 - MLT1E3 LTR MaLR -430 194 62 424 254 53 0 chr5 86857700 86857814 -116227718 + L1M4 LINE L1 3950 4069 -2077 257 164 16 145 chr5 86857814 86857947 -116227585 + L1ME4a LINE L1 1202 6083 -29 2047 142 19 138 chr5 86858399 86858970 -116226562 + MLT1D LTR MaLR 1 503 -2 201 275 79 62 chr5 86860829 86860988 -116224544 - MIR3 SINE MIR -70 138 3 198 231 90 26 chr5 86861357 86861435 -116224097 + MIR3 SINE MIR 114 196 -12 270 231 8 146 chr5 86863742 86863872 -116221660 - L2 LINE L2 -2 3311 3200 3283 172 67 21 chr5 86863921 86864269 -116221263 - L1MB2 LINE L1 -1 6170 5839 417 39 0 0 chr5 86864269 86864320 -116221212 + (TA)n Simple_repeat Simple_repeat 2 52 0 3283 172 67 21 chr5 86864320 86864627 -116220905 - L1MB2 LINE L1 -332 5839 5485 210 71 0 0 chr5 86864627 86864655 -116220877 + (TCCC)n Simple_repeat Simple_repeat 4 31 0 297 295 39 0 chr5 86865427 86865505 -116220027 - MIR3 SINE MIR -7 201 121 2204 120 144 5 chr5 86866416 86866792 -116218740 - MSTA LTR MaLR 0 428 1 1128 189 62 36 chr5 86867201 86867507 -116218025 - MER33 DNA MER1_type -9 315 2 196 273 137 56 chr5 86868720 86868881 -116216651 - MIR3 SINE MIR -30 178 5 269 246 0 0 chr5 86869674 86869731 -116215801 - MIR3 SINE MIR -26 182 126 258 162 0 0 chr5 86870686 86870723 -116214809 + AluY SINE Alu 2 38 -262 634 219 94 40 chr5 86920725 86920949 -116164583 - MLT1D LTR MaLR -264 241 6 525 258 0 45 chr5 86920951 86921083 -116164449 + L2 LINE L2 3187 3312 -1 1968 121 13 10 chr5 86921160 86921458 -116164074 - AluSx SINE Alu -13 299 1 252 0 0 0 chr5 86921517 86921545 -116163987 + (T)n Simple_repeat Simple_repeat 1 28 0 27 49 0 0 chr5 86921864 86921905 -116163627 + AT_rich Low_complexity Low_complexity 1 41 0 652 192 30 24 chr5 86922170 86922337 -116163195 - MLT1J2 LTR MaLR -229 221 54 187 286 60 48 chr5 86922404 86922488 -116163044 - L2 LINE L2 -38 3234 3150 485 259 35 66 chr5 86922613 86922841 -116162691 - LTR33 LTR ERVL 0 521 301 552 132 123 0 chr5 86922954 86923060 -116162472 - MLT1B LTR MaLR -249 141 23 236 174 43 0 chr5 86923070 86923116 -116162416 - MLT1B LTR MaLR -342 48 1 185 268 146 81 chr5 86923169 86923292 -116162240 + L2 LINE L2 3137 3267 -5 352 292 99 6 chr5 86924021 86924192 -116161340 + MIR SINE MIR 64 250 -12 21 36 0 0 chr5 86924420 86924448 -116161084 + AT_rich Low_complexity Low_complexity 1 28 0 222 128 0 0 chr5 86924630 86924669 -116160863 + (TGG)n Simple_repeat Simple_repeat 2 40 0 297 309 58 53 chr5 86924711 86924918 -116160614 - L2 LINE L2 -360 2954 2747 292 304 111 47 chr5 86925615 86925786 -116159746 - MIR3 SINE MIR -8 200 19 1357 231 106 39 chr5 86927176 86927583 -116157949 - MLT2B1 LTR ERVL -2 518 85 1007 181 23 0 chr5 86927684 86927861 -116157671 + MLT1B LTR MaLR 210 390 0 870 58 7 36 chr5 86929719 86929856 -116155676 + AluY SINE Alu 24 156 -155 1176 91 0 7 chr5 86929868 86930022 -116155510 + AluYa5 SINE Alu 139 291 -20 1169 234 56 20 chr5 86930285 86930589 -116154943 + MER21B LTR ERV1 491 805 -58 2158 115 3 7 chr5 86931110 86931405 -116154127 - AluSx SINE Alu -18 294 1 388 253 81 77 chr5 86931491 86931752 -116153780 + L1MC4a LINE L1 5680 5941 -1867 188 65 0 32 chr5 86933155 86933186 -116152346 + (TA)n Simple_repeat Simple_repeat 1 30 0 2271 102 0 0 chr5 86933558 86933900 -116151632 + AluSx SINE Alu 14 312 0 302 171 86 0 chr5 86933926 86933996 -116151536 + L1ME4a LINE L1 5628 5703 -418 326 265 140 19 chr5 86934072 86934336 -116151196 + L1ME4a LINE L1 5811 6106 -15 698 206 8 0 chr5 86934356 86934482 -116151050 - FLAM_A SINE Alu -7 135 9 315 267 112 9 chr5 86935424 86935540 -116149992 - MIR SINE MIR -48 214 87 6981 41 3 5 chr5 86935747 86936604 -116148928 - L1PA3 LINE L1 -1 6154 5299 4775 43 1 19 chr5 86936605 86937725 -116147807 + L1PA5 LINE L1 4813 5858 -296 1381 251 55 46 chr5 86937962 86938421 -116147111 + MLT1J LTR MaLR 1 463 -48 766 308 48 69 chr5 86938546 86939027 -116146505 + LTR67 LTR ERVL 85 555 -2 276 228 114 163 chr5 86939039 86939162 -116146370 + L2 LINE L2 3140 3256 -16 21 0 0 0 chr5 86939165 86939186 -116146346 + AT_rich Low_complexity Low_complexity 1 21 0 201 348 76 6 chr5 86939209 86939367 -116146165 + L2 LINE L2 1828 1996 -1318 189 0 0 0 chr5 86939384 86939405 -116146127 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 524 291 20 60 chr5 86939479 86939678 -116145854 + L2 LINE L2 2187 2377 -937 30 59 0 0 chr5 86940004 86940055 -116145477 + AT_rich Low_complexity Low_complexity 1 51 0 5212 138 28 37 chr5 86940876 86942157 -116143375 - L1MA1 LINE L1 -71 7650 6383 2230 109 35 40 chr5 86942156 86942560 -116142972 - L1MA1 LINE L1 -4390 3175 2774 * 3376 189 34 6 chr5 86942564 86943216 -116142316 - MER52A LTR ERV1 -5 1750 1081 23 33 0 0 chr5 86943705 86943735 -116141797 + AT_rich Low_complexity Low_complexity 1 30 0 8658 42 1 1 chr5 86943735 86945508 -116140024 - L1PA5 LINE L1 -2 6152 4383 14277 27 5 1 chr5 86945764 86947447 -116138085 - L1P LINE L1 -844 5302 3613 16065 75 2 1 chr5 86947576 86949637 -116135895 - L1PA5 LINE L1 -4077 2069 7 1155 66 0 0 chr5 86949639 86949775 -116135757 - AluY SINE Alu -175 136 1 1964 114 21 4 chr5 86950044 86950324 -116135208 - AluSx SINE Alu -27 285 1 206 316 38 0 chr5 86950365 86950444 -116135088 + L2 LINE L2 3220 3301 -12 225 0 0 0 chr5 86950569 86950594 -116134938 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 516 204 155 7 chr5 86951510 86951652 -116133880 + MARNA DNA Mariner 65 227 -359 1582 146 27 60 chr5 86951826 86951928 -116133604 - MER33 DNA MER1_type -2261 324 220 1737 132 71 4 chr5 86951928 86952194 -116133338 - AluJb SINE Alu -25 287 4 1582 146 27 60 chr5 86952194 86952426 -116133106 - MER33 DNA MER1_type -2365 220 1 2275 82 3 35 chr5 86953339 86953654 -116131878 - AluSg SINE Alu -5 305 1 1013 101 16 0 chr5 86954115 86954244 -116131288 + FLAM_C SINE Alu 1 131 -2 1085 255 242 36 chr5 86954504 86955119 -116130413 + L2 LINE L2 166 907 -2407 930 100 100 184 chr5 86955121 86955442 -116130090 + MER33 DNA MER1_type 1 294 -30 861 180 11 28 chr5 86955442 86955620 -116129912 + L1 LINE L1 2762 2936 -3210 6219 145 44 17 chr5 86955638 86956657 -116128875 + L1M1 LINE L1 161 1207 -6358 912 73 0 0 chr5 86956660 86956770 -116128762 - AluSc SINE Alu -197 112 3 330 309 17 51 chr5 86956893 86957068 -116128464 - LTR16C LTR ERVL -35 456 288 653 293 59 24 chr5 86957987 86958240 -116127292 - MIR SINE MIR 0 262 1 2011 229 47 12 chr5 86960230 86960741 -116124791 - L1ME1 LINE L1 -17 6149 5621 1623 215 51 96 chr5 86960735 86961047 -116124485 - L1MDb LINE L1 -4793 1613 1289 * 2173 134 0 6 chr5 86961047 86961361 -116124171 - AluSx SINE Alu 0 312 1 1623 215 51 96 chr5 86961361 86961983 -116123549 - L1MDb LINE L1 -5117 1289 748 345 296 95 82 chr5 86961992 86962296 -116123236 - L1MDb LINE L1 -5573 823 516 207 100 0 0 chr5 86962296 86962326 -116123206 + (A)n Simple_repeat Simple_repeat 1 30 0 1178 158 4 73 chr5 86962499 86962745 -116122787 + AluJo SINE Alu 84 312 0 398 65 290 0 chr5 86963020 86963082 -116122450 + MADE1 DNA Mariner 1 80 0 216 295 116 0 chr5 86963312 86963407 -116122125 - L2 LINE L2 -3 3269 3164 21 0 0 0 chr5 86964002 86964023 -116121509 + AT_rich Low_complexity Low_complexity 1 21 0 3797 201 25 52 chr5 86965749 86966745 -116118787 + LTR5 LTR ERVK 1 969 0 828 200 82 0 chr5 86967152 86967322 -116118210 - MER5A DNA MER1_type -5 184 1 214 175 25 0 chr5 86967665 86967705 -116117827 + MER5B DNA MER1_type 1 41 -137 2174 90 0 0 chr5 86967707 86967985 -116117547 + AluSx SINE Alu 35 312 0 246 347 31 0 chr5 86968189 86968287 -116117245 - MIR SINE MIR -78 130 30 1989 75 8 11 chr5 86969530 86969795 -116115737 - AluY SINE Alu -28 283 20 1426 153 88 29 chr5 86970091 86970365 -116115167 + AluJo SINE Alu 1 290 -22 704 113 0 28 chr5 86970558 86970664 -116114868 - LTR32 LTR ERVL -13 458 356 369 187 13 0 chr5 86970998 86971073 -116114459 - MLT1F LTR MaLR 0 542 467 1433 200 58 3 chr5 86971249 86971559 -116113973 - L1MC4 LINE L1 -1 8041 7715 1920 138 3 0 chr5 86971580 86971863 -116113669 - AluSx SINE Alu -28 284 1 557 83 48 30 chr5 86972723 86972891 -116112641 + (TA)n Simple_repeat Simple_repeat 1 171 0 2686 156 79 0 chr5 86973207 86973675 -116111857 + L1M3f LINE L1 4 508 -4820 230 225 38 50 chr5 86974376 86974456 -116111076 - MER20B DNA MER1_type -640 143 65 18251 33 2 2 chr5 86974715 86977550 -116107982 - L1PA4 LINE L1 -1 6154 3317 4533 166 15 39 chr5 86977697 86978306 -116107226 - L1MB7 LINE L1 -16 6168 5585 1736 201 87 11 chr5 86978306 86978674 -116106858 + MSTD LTR MaLR 1 396 0 4533 166 15 39 chr5 86978674 86978973 -116106559 - L1MB7 LINE L1 -599 5585 5281 723 238 139 41 chr5 86978973 86979267 -116106265 - L1MB7 LINE L1 -1142 5004 4682 805 170 116 132 chr5 86979303 86979570 -116105962 + MLT1E2 LTR MaLR 1 264 -362 2294 71 6 26 chr5 86979570 86979881 -116105651 - AluY SINE Alu -6 305 1 805 170 116 132 chr5 86979881 86979931 -116105601 + MLT1E2 LTR MaLR 264 313 -313 4557 186 35 29 chr5 86979932 86980892 -116104640 + L1M3f LINE L1 12 977 -4351 21 0 0 0 chr5 86981092 86981113 -116104419 + GC_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 86981141 86981166 -116104366 + GC_rich Low_complexity Low_complexity 1 25 0 1345 149 0 10 chr5 86981654 86981862 -116103670 - AluJb SINE Alu -106 206 1 730 260 68 18 chr5 86982511 86982738 -116102794 + MIR SINE MIR 15 250 -12 302 281 118 77 chr5 86982856 86983077 -116102455 + HAL1 LINE L1 742 971 -1536 951 249 112 42 chr5 86983152 86983626 -116101906 + HAL1 LINE L1 995 1501 -1006 2156 103 0 10 chr5 86983737 86984028 -116101504 - AluSx SINE Alu -22 290 3 330 309 17 51 chr5 86984198 86984373 -116101159 - LTR16C LTR ERVL -35 456 288 653 293 59 24 chr5 86985295 86985548 -116099984 - MIR SINE MIR 0 262 1 516 204 155 7 chr5 86987627 86987769 -116097763 + MARNA DNA Mariner 65 227 -359 1582 146 27 60 chr5 86987943 86988045 -116097487 - MER33 DNA MER1_type -2261 324 220 1737 132 71 4 chr5 86988045 86988311 -116097221 - AluJb SINE Alu -25 287 4 1582 146 27 60 chr5 86988311 86988543 -116096989 - MER33 DNA MER1_type -2365 220 1 2356 96 3 3 chr5 86989450 86989762 -116095770 - AluSx SINE Alu 0 312 1 2005 129 0 10 chr5 86990655 86990958 -116094574 + AluSx SINE Alu 1 300 -12 21 57 0 0 chr5 86991913 86991948 -116093584 + AT_rich Low_complexity Low_complexity 1 35 0 2321 108 71 8 chr5 86992883 86993236 -116092296 + THE1C LTR MaLR 1 375 0 274 267 93 12 chr5 86993560 86993646 -116091886 + MIR3 SINE MIR 102 194 -14 640 275 122 18 chr5 86993717 86993946 -116091586 + MIR SINE MIR 10 262 0 914 249 79 51 chr5 86994873 86995266 -116090266 + MLT1E2 LTR MaLR 14 417 -209 1858 134 0 21 chr5 86995692 86995975 -116089557 + AluSx SINE Alu 36 312 0 30 0 0 0 chr5 86996031 86996061 -116089471 + AT_rich Low_complexity Low_complexity 1 30 0 2277 122 49 3 chr5 86997430 86997775 -116087757 + MER46B DNA MER2_type 1 236 0 1662 141 58 4 chr5 86998435 86998711 -116086821 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr5 86998953 86998975 -116086557 + AT_rich Low_complexity Low_complexity 1 22 0 23 78 0 0 chr5 86999076 86999127 -116086405 + AT_rich Low_complexity Low_complexity 1 51 0 1807 193 0 7 chr5 86999133 86999434 -116086098 + AluJo SINE Alu 2 300 -12 2562 36 7 3 chr5 86999973 87000277 -116085255 + AluY SINE Alu 1 305 -6 1975 182 0 0 chr5 87001887 87002195 -116083337 + AluSx SINE Alu 1 308 -4 314 258 148 55 chr5 87002451 87002707 -116082825 + L1ME4a LINE L1 5315 5594 -2214 4495 134 23 3 chr5 87002721 87003361 -116082171 - MER39B LTR ERV1 0 653 1 350 203 138 8 chr5 87003650 87003719 -116081813 + L1ME4a LINE L1 5964 6023 -98 2451 92 0 0 chr5 87003719 87004025 -116081507 - AluSx SINE Alu -6 306 1 350 203 138 8 chr5 87004025 87004078 -116081454 + L1ME4a LINE L1 6023 6102 -19 24 96 0 0 chr5 87004824 87004897 -116080635 + AT_rich Low_complexity Low_complexity 1 73 0 390 286 2 8 chr5 87004959 87005167 -116080365 - Charlie8 DNA MER1_type 0 2417 140 704 208 77 36 chr5 87005171 87005302 -116080230 - L1MC4 LINE L1 -1 8041 7896 237 65 0 0 chr5 87005302 87005333 -116080199 + (CA)n Simple_repeat Simple_repeat 2 32 0 704 208 77 36 chr5 87005333 87005422 -116080110 - L1MC4 LINE L1 -146 7896 7812 409 162 117 9 chr5 87005600 87005711 -116079821 - Charlie7 DNA MER1_type -59 2553 2431 326 235 69 20 chr5 87005704 87005806 -116079726 - Charlie7 DNA MER1_type -2505 107 1 * 566 279 27 45 chr5 87005905 87006127 -116079405 + L2 LINE L2 3095 3312 -1 26 0 0 0 chr5 87006345 87006371 -116079161 + AT_rich Low_complexity Low_complexity 1 26 0 368 311 71 44 chr5 87008288 87008416 -116077116 + MIR SINE MIR 25 163 -99 2137 159 99 26 chr5 87008416 87008838 -116076694 - MSTB2 LTR MaLR -4 453 1 368 311 71 44 chr5 87008838 87008934 -116076598 + MIR SINE MIR 163 255 -7 1111 171 0 0 chr5 87011575 87011750 -116073782 - AluJb SINE Alu -9 303 129 261 272 104 90 chr5 87011919 87012198 -116073334 + L2 LINE L2 2686 2968 -346 222 297 148 20 chr5 87012343 87012444 -116073088 + L2 LINE L2 3179 3292 -21 358 321 18 0 chr5 87012778 87012887 -116072645 - L2 LINE L2 0 3313 3203 340 225 38 0 chr5 87013277 87013357 -116072175 + MIR SINE MIR 84 166 -96 2191 132 0 0 chr5 87013574 87013885 -116071647 - AluSx SINE Alu -1 311 1 2518 132 8 27 chr5 87014288 87014659 -116070873 + THE1B LTR MaLR 1 364 0 186 71 0 0 chr5 87016367 87016395 -116069137 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 766 214 131 0 chr5 87018103 87018332 -116067200 - MER20B DNA MER1_type -6 777 519 882 224 56 52 chr5 87018427 87018659 -116066873 - MER20B DNA MER1_type -459 324 92 25 0 0 0 chr5 87019110 87019135 -116066397 + AT_rich Low_complexity Low_complexity 1 25 0 1243 210 58 46 chr5 87019233 87019317 -116066215 + L1M4 LINE L1 3427 3509 -2637 2102 97 7 0 chr5 87019317 87019617 -116065915 + AluSx SINE Alu 1 302 0 1243 210 58 46 chr5 87019617 87019879 -116065653 + L1M4 LINE L1 3509 3778 -2368 759 152 8 181 chr5 87019897 87020134 -116065398 - MLT1D LTR MaLR -30 475 280 3805 213 7 17 chr5 87020134 87021040 -116064492 - L1M1 LINE L1 -4411 3154 2258 21 0 0 0 chr5 87022410 87022431 -116063101 + AT_rich Low_complexity Low_complexity 1 21 0 1580 197 103 14 chr5 87022486 87022846 -116062686 - MSTD LTR MaLR -4 392 1 377 301 124 0 chr5 87023100 87023213 -116062319 - L2 LINE L2 0 3272 3146 418 367 39 4 chr5 87023261 87023490 -116062042 - L2 LINE L2 -1283 2031 1795 282 214 58 78 chr5 87023542 87023645 -116061887 - MLT1L LTR MaLR -8 607 507 833 194 31 42 chr5 87023730 87023921 -116061611 + MER97a DNA MER1_type? 242 430 -464 958 109 0 36 chr5 87024104 87024242 -116061290 + FLAM_C SINE Alu 1 133 0 304 200 40 27 chr5 87024382 87024457 -116061075 + L1ME3A LINE L1 6042 6117 -53 1759 106 3 88 chr5 87024788 87025127 -116060405 - AluSq SINE Alu -3 310 1 581 178 93 0 chr5 87025718 87025836 -116059696 - L1MC3 LINE L1 -6 7779 7651 204 158 0 0 chr5 87025864 87025902 -116059630 + (CA)n Simple_repeat Simple_repeat 1 38 0 669 173 36 77 chr5 87026779 87027071 -116058461 - AluSg SINE Alu 0 329 48 31390 56 4 0 chr5 87027223 87031098 -116054434 - L1P LINE L1 -2253 3893 2 7563 118 3 21 chr5 87031905 87034125 -116051407 + L1MA3 LINE L1 4127 6305 0 499 261 69 69 chr5 87034521 87034639 -116050893 - MER5A DNA MER1_type 0 189 69 615 135 0 10 chr5 87034639 87034743 -116050789 - L1MB5 LINE L1 0 6174 6072 499 261 69 69 chr5 87034743 87034812 -116050720 - MER5A DNA MER1_type -119 70 2 2196 140 0 0 chr5 87035300 87035608 -116049924 + AluSx SINE Alu 1 308 -4 640 157 0 28 chr5 87036797 87036905 -116048627 + FLAM_C SINE Alu 14 118 -25 3556 114 8 19 chr5 87037674 87038207 -116047325 - MER1A DNA MER1_type 0 527 1 1581 118 29 18 chr5 87038240 87038519 -116047013 + L1MC1 LINE L1 6052 6333 0 641 266 89 22 chr5 87038530 87039227 -116046305 - L1MB5 LINE L1 -749 5397 4735 218 262 0 0 chr5 87039298 87039340 -116046192 + polypyrimidine Low_complexity Low_complexity 1 42 0 1855 144 6 22 chr5 87039340 87039652 -116045880 - AluJb SINE Alu -5 307 1 441 293 104 38 chr5 87039658 87039975 -116045557 - L1MB5 LINE L1 -1594 4552 4215 839 271 209 9 chr5 87040022 87040571 -116044961 + L1MC4a LINE L1 5268 5926 -1882 225 209 0 0 chr5 87040571 87040614 -116044918 + (TA)n Simple_repeat Simple_repeat 1 43 0 2446 87 0 3 chr5 87041597 87041907 -116043625 + AluSx SINE Alu 1 309 -3 269 200 40 27 chr5 87042238 87042313 -116043219 - L1ME3A LINE L1 -53 6117 6042 900 109 0 36 chr5 87042452 87042590 -116042942 - FLAM_C SINE Alu 0 133 1 747 191 32 42 chr5 87042773 87042962 -116042570 - MER97b DNA MER1_type? -623 430 244 232 265 10 39 chr5 87043049 87043151 -116042381 + MLT1L LTR MaLR 507 605 -10 424 367 39 4 chr5 87043205 87043434 -116042098 + L2 LINE L2 1795 2031 -1283 362 261 109 29 chr5 87043457 87043595 -116041937 + L2 LINE L2 3165 3313 0 1420 197 103 14 chr5 87043843 87044203 -116041329 + MSTD LTR MaLR 1 392 -4 21 0 0 0 chr5 87044258 87044279 -116041253 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 144 9 chr5 87045493 87045604 -116039928 - MIR3 SINE MIR -52 156 31 2101 118 7 0 chr5 87047425 87047714 -116037818 + AluSx SINE Alu 1 291 -21 2230 99 0 10 chr5 87048177 87048490 -116037042 - AluY SINE Alu -1 310 1 2138 133 0 0 chr5 87050019 87050320 -116035212 - AluSx SINE Alu -11 301 1 238 309 114 29 chr5 87050775 87050950 -116034582 - L3b LINE CR1 -217 1366 1177 816 253 30 34 chr5 87051250 87051483 -116034049 + L2 LINE L2 3057 3288 -25 425 188 99 50 chr5 87052115 87052216 -116033316 - MIR3 SINE MIR -41 167 62 1900 136 11 0 chr5 87052525 87052840 -116032692 + AluSx SINE Alu 1 318 0 538 261 143 32 chr5 87052899 87053137 -116032395 + MIR SINE MIR 5 259 -3 330 320 41 25 chr5 87054773 87054895 -116030637 - L2 LINE L2 0 3272 3149 1213 191 58 4 chr5 87056096 87056321 -116029211 - MER8 DNA MER2_type -1 238 2 250 299 60 0 chr5 87056669 87056736 -116028796 - L2 LINE L2 -2 3270 3200 231 261 113 56 chr5 87057017 87057159 -116028373 - L2 LINE L2 -127 3145 2996 24 0 0 0 chr5 87057651 87057675 -116027857 + AT_rich Low_complexity Low_complexity 1 24 0 388 296 38 0 chr5 87057689 87057821 -116027711 - MIR SINE MIR -13 249 113 2302 109 0 6 chr5 87058210 87058522 -116027010 - AluSx SINE Alu -2 310 1 225 209 0 0 chr5 87059505 87059548 -116025984 + (TA)n Simple_repeat Simple_repeat 2 44 0 637 265 148 9 chr5 87059548 87060102 -116025430 - L1MC4a LINE L1 -340 5781 5262 441 293 104 38 chr5 87060144 87060461 -116025071 + L1MC/D LINE L1 4215 4552 -1594 2007 141 7 10 chr5 87060467 87060771 -116024761 + AluJb SINE Alu 1 303 -9 218 262 0 0 chr5 87060771 87060813 -116024719 + polypurine Low_complexity Low_complexity 1 42 0 689 266 89 21 chr5 87060882 87061578 -116023954 + L1MC/D LINE L1 4735 5470 -749 4178 127 31 31 chr5 87061589 87061898 -116023634 - L1MC1 LINE L1 0 6333 6025 3696 116 4 15 chr5 87061898 87062431 -116023101 + MER1A DNA MER1_type 1 527 0 4178 127 31 31 chr5 87062431 87062884 -116022648 - L1MC1 LINE L1 -307 6026 5571 3355 202 74 29 chr5 87062951 87063195 -116022337 + L1MC4 LINE L1 6577 6809 -1233 2127 119 0 0 chr5 87063195 87063489 -116022043 + AluSx SINE Alu 1 294 -18 3355 202 74 29 chr5 87063489 87064181 -116021351 + L1MC4 LINE L1 6809 7555 -487 1213 186 128 30 chr5 87064689 87065055 -116020477 - LTR37A LTR ERV1 0 426 25 371 307 118 83 chr5 87065812 87066574 -116018958 + L1M2 LINE L1 672 1325 -5524 235 289 96 10 chr5 87067087 87067191 -116018341 - MIR SINE MIR -95 167 55 2358 89 3 0 chr5 87067929 87068231 -116017301 + AluSx SINE Alu 1 303 -9 833 250 104 0 chr5 87068568 87068780 -116016752 - MIR SINE MIR -27 235 2 2833 10 0 0 chr5 87069059 87069366 -116016166 + AluYb8 SINE Alu 1 307 -11 246 258 72 31 chr5 87069583 87069680 -116015852 + MIR3 SINE MIR 87 187 -21 249 33 0 0 chr5 87070201 87070231 -116015301 + (CA)n Simple_repeat Simple_repeat 2 31 0 1326 233 28 44 chr5 87070280 87070713 -116014819 - L1MC4a LINE L1 -1854 5954 5529 * 4957 193 66 22 chr5 87070711 87071181 -116014351 - L1MB5 LINE L1 -8 6166 5718 1567 147 134 16 chr5 87071181 87071488 -116014044 - MER61A LTR ERV1 0 343 1 4957 193 66 22 chr5 87071488 87072604 -116012928 - L1MB5 LINE L1 -456 5718 4465 2101 122 27 14 chr5 87072604 87072898 -116012634 - AluSq SINE Alu -15 298 1 4957 193 66 22 chr5 87072898 87073357 -116012175 - L1MB5 LINE L1 -1709 4465 4028 230 206 162 15 chr5 87073365 87073433 -116012099 - L2 LINE L2 0 3272 3195 2347 82 0 0 chr5 87073501 87073783 -116011749 + AluSx SINE Alu 1 282 -30 319 298 173 14 chr5 87073892 87074100 -116011432 - L2 LINE L2 -263 3050 2810 1710 133 24 88 chr5 87074347 87074677 -116010855 + AluJb SINE Alu 1 309 -3 24 0 0 0 chr5 87074901 87074925 -116010607 + AT_rich Low_complexity Low_complexity 1 24 0 267 103 0 0 chr5 87078411 87078450 -116007082 + (TG)n Simple_repeat Simple_repeat 1 39 0 1110 252 150 22 chr5 87078504 87078964 -116006568 - LTR33 LTR ERVL -2 519 1 616 213 21 0 chr5 87079042 87079183 -116006349 - L1MA10 LINE L1 -2 6332 6189 223 263 28 0 chr5 87079321 87079387 -116006145 - MIR SINE MIR -100 108 40 619 294 44 40 chr5 87079795 87079965 -116005567 + L2 LINE L2 2877 3050 -263 1780 167 0 38 chr5 87079965 87080282 -116005250 - AluJb SINE Alu -7 305 1 619 294 44 40 chr5 87080282 87080383 -116005149 + L2 LINE L2 3050 3149 -164 1846 179 72 12 chr5 87080391 87080878 -116004654 - Charlie1 DNA MER1_type -3 2758 2243 2386 92 0 7 chr5 87081035 87081341 -116004191 + AluSq SINE Alu 1 304 -9 2231 93 0 7 chr5 87082305 87082647 -116002885 + AluY SINE Alu 1 311 0 234 320 10 0 chr5 87082999 87083096 -116002436 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 2360 96 0 0 chr5 87083259 87083560 -116001972 - AluSg SINE Alu -9 301 1 22 0 0 0 chr5 87084008 87084030 -116001502 + AT_rich Low_complexity Low_complexity 1 22 0 596 142 9 0 chr5 87084430 87084536 -116000996 + L1MB8 LINE L1 6063 6169 -9 21 57 0 0 chr5 87085127 87085162 -116000370 + AT_rich Low_complexity Low_complexity 1 35 0 1455 138 11 33 chr5 87085297 87085572 -115999960 - L1MB8 LINE L1 -1 6177 5909 32 43 0 0 chr5 87085582 87085628 -115999904 + AT_rich Low_complexity Low_complexity 1 46 0 500 310 27 27 chr5 87086650 87086837 -115998695 - MER5A DNA MER1_type -1 188 2 718 222 21 46 chr5 87086987 87087226 -115998306 - L1M4 LINE L1 -1404 4742 4510 2333 129 72 7 chr5 87087563 87087966 -115997566 - MSTB1 LTR MaLR 0 432 4 1656 50 5 10 chr5 87088248 87088450 -115997082 + AluY SINE Alu 102 302 -9 611 244 16 0 chr5 87088779 87088906 -115996626 - MIR SINE MIR -119 143 15 472 208 107 94 chr5 87088971 87089130 -115996402 - MER5B DNA MER1_type -1 177 17 2162 117 3 0 chr5 87090112 87090411 -115995121 + AluSg SINE Alu 1 300 -10 963 101 7 0 chr5 87091396 87091535 -115993997 - LTR24B LTR ERV1 -7 569 430 2318 116 34 28 chr5 87091542 87091973 -115993559 - THE1C LTR MaLR 0 428 1 * 2676 107 26 5 chr5 87091973 87092391 -115993141 - LTR24B LTR ERV1 -149 427 1 384 289 30 46 chr5 87092765 87092962 -115992570 - MER102b DNA MER1_type -3 338 145 349 288 123 25 chr5 87094174 87094337 -115991195 + MIR SINE MIR 84 262 0 3998 166 64 22 chr5 87094428 87095373 -115990159 - L1MB8 LINE L1 0 6178 5199 1213 191 58 4 chr5 87096999 87097224 -115988308 - MER8 DNA MER2_type -1 238 2 250 299 60 0 chr5 87097572 87097639 -115987893 - L2 LINE L2 -2 3270 3200 231 261 113 56 chr5 87097920 87098062 -115987470 - L2 LINE L2 -127 3145 2996 24 0 0 0 chr5 87098554 87098578 -115986954 + AT_rich Low_complexity Low_complexity 1 24 0 388 296 38 0 chr5 87098592 87098724 -115986808 - MIR SINE MIR -13 249 113 2064 135 6 28 chr5 87099110 87099429 -115986103 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 87099602 87099624 -115985908 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 87099814 87099840 -115985692 + AT_rich Low_complexity Low_complexity 1 26 0 206 239 56 183 chr5 87100250 87100430 -115985102 + L2 LINE L2 2989 3145 -127 317 329 123 6 chr5 87100987 87101157 -115984375 - MIR3 SINE MIR -6 202 13 2952 110 5 12 chr5 87101281 87101710 -115983822 - MSTA LTR MaLR 0 428 3 9398 160 22 2 chr5 87101717 87103329 -115982203 - MSTA-int LTR MaLR -5 1646 2 2974 103 14 7 chr5 87103330 87103755 -115981777 - MSTA LTR MaLR 0 428 1 415 307 73 0 chr5 87104463 87104600 -115980932 - MIR SINE MIR -66 196 50 202 254 34 17 chr5 87104600 87104659 -115980873 - L2 LINE L2 -9 3263 3204 243 360 142 29 chr5 87104963 87105307 -115980225 + L2 LINE L2 2474 2856 -458 420 239 78 67 chr5 87105309 87105489 -115980043 - L2 LINE L2 -11 3302 3121 587 256 56 32 chr5 87105489 87105774 -115979758 + L1ME1 LINE L1 3717 4008 -2138 3437 212 77 37 chr5 87105775 87105791 -115979741 + L1ME1 LINE L1 4147 4161 -2005 1644 90 0 53 chr5 87105791 87106036 -115979496 + AluSc SINE Alu 78 309 0 3437 212 77 37 chr5 87106036 87107478 -115978054 + L1ME1 LINE L1 4161 5544 -622 962 204 111 5 chr5 87107478 87107694 -115977838 - MER8 DNA MER2_type 0 239 1 3437 212 77 37 chr5 87107694 87107820 -115977712 + L1ME1 LINE L1 5544 5663 -503 1597 170 38 4 chr5 87107820 87108085 -115977447 - AluJb SINE Alu -23 289 16 3437 212 77 37 chr5 87108085 87108434 -115977098 + L1ME1 LINE L1 5663 6143 -23 23 0 0 0 chr5 87108444 87108467 -115977065 + AT_rich Low_complexity Low_complexity 1 23 0 200 196 0 20 chr5 87108697 87108748 -115976784 + CT-rich Low_complexity Low_complexity 1 50 0 184 315 27 41 chr5 87108894 87108967 -115976565 - MIR SINE MIR -114 148 77 357 252 63 54 chr5 87109195 87109306 -115976226 - MER5B DNA MER1_type 0 178 67 784 219 33 33 chr5 87109308 87109364 -115976168 - MER5A DNA MER1_type -5 184 129 2149 132 0 0 chr5 87109364 87109653 -115975879 + AluSx SINE Alu 1 289 -23 240 100 0 0 chr5 87109653 87109693 -115975839 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 784 219 33 33 chr5 87109693 87109818 -115975714 - MER5A DNA MER1_type -58 131 2 619 159 63 122 chr5 87109904 87110093 -115975439 - MER5B DNA MER1_type 0 178 1 231 295 0 0 chr5 87110255 87110316 -115975216 - MIR SINE MIR 0 262 202 257 209 15 0 chr5 87110487 87110554 -115974978 + GA-rich Low_complexity Low_complexity 1 68 0 308 267 9 19 chr5 87111666 87111771 -115973761 + MIR3 SINE MIR 86 189 -19 180 283 43 0 chr5 87112996 87113042 -115972490 - L3 LINE CR1 -140 1437 1390 977 190 22 0 chr5 87113242 87113426 -115972106 - MER5A DNA MER1_type -1 188 1 270 293 155 9 chr5 87115336 87115452 -115970080 - MIR SINE MIR -119 143 11 256 333 65 59 chr5 87115512 87115665 -115969867 + MIR3 SINE MIR 1 154 -54 844 164 0 20 chr5 87116939 87117085 -115968447 - FLAM_C SINE Alu 0 143 1 195 222 139 56 chr5 87117362 87117434 -115968098 - L2 LINE L2 -3 3310 3233 2311 99 7 0 chr5 87117596 87117900 -115967632 - AluSp SINE Alu -7 306 1 29 0 0 0 chr5 87118116 87118145 -115967387 + AT_rich Low_complexity Low_complexity 1 29 0 217 263 0 63 chr5 87118496 87118591 -115966941 - MIR3 SINE MIR -19 189 101 295 299 163 0 chr5 87119301 87119448 -115966084 + MIR SINE MIR 92 262 0 21 57 0 0 chr5 87119506 87119541 -115965991 + AT_rich Low_complexity Low_complexity 1 35 0 2295 104 23 10 chr5 87120127 87120435 -115965097 + AluSx SINE Alu 1 312 0 196 264 0 19 chr5 87121015 87121068 -115964464 - L3 LINE CR1 0 1577 1526 267 293 131 30 chr5 87121070 87121169 -115964363 - MER5A DNA MER1_type -2 187 79 432 234 197 0 chr5 87121178 87121315 -115964217 - MER5A DNA MER1_type 0 189 26 290 264 176 16 chr5 87121334 87121459 -115964073 - MIR3 SINE MIR -48 160 16 24 0 0 0 chr5 87122782 87122806 -115962726 + AT_rich Low_complexity Low_complexity 1 24 0 1541 168 48 7 chr5 87123419 87123711 -115961821 + AluJo SINE Alu 1 304 -8 2638 43 0 0 chr5 87124533 87124836 -115960696 + AluY SINE Alu 1 303 -8 253 292 124 26 chr5 87125161 87125274 -115960258 - MIR SINE MIR -119 143 20 537 292 128 9 chr5 87125737 87125963 -115959569 + MIR SINE MIR 7 259 -3 395 284 28 57 chr5 87126404 87126545 -115958987 + MER5A DNA MER1_type 2 138 -51 1768 145 15 96 chr5 87126579 87126986 -115958546 + MLT1A2 LTR MaLR 1 374 0 238 290 14 0 chr5 87127067 87127136 -115958396 + MER5A DNA MER1_type 120 189 0 2035 152 44 50 chr5 87127585 87127959 -115957573 + L1M4 LINE L1 4395 4767 -1379 1936 152 27 0 chr5 87127959 87128255 -115957277 + AluSx SINE Alu 1 304 -8 2035 152 44 50 chr5 87128255 87128360 -115957172 + L1M4 LINE L1 4767 4871 -1275 2400 226 87 45 chr5 87128360 87128551 -115956981 + MER21B LTR ERV1 1 183 -680 7381 33 1 1 chr5 87128551 87129493 -115956039 + L1PA3 LINE L1 5228 6169 0 2400 226 87 45 chr5 87129493 87130062 -115955470 + MER21B LTR ERV1 183 794 -69 2292 198 4 2 chr5 87130093 87130597 -115954935 + L1M4 LINE L1 4866 5370 -776 196 379 166 0 chr5 87130817 87130962 -115954570 + L2 LINE L2 2435 2603 -711 299 286 12 0 chr5 87131016 87131100 -115954432 + L2 LINE L2 3226 3310 -3 2138 114 3 19 chr5 87131470 87131777 -115953755 + AluSq SINE Alu 1 302 -11 195 100 0 0 chr5 87131910 87131940 -115953592 + (TC)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr5 87132464 87132487 -115953045 + AT_rich Low_complexity Low_complexity 1 23 0 1981 128 11 0 chr5 87135813 87136135 -115949397 - AluSx SINE Alu 0 325 1 1638 157 36 18 chr5 87136137 87136411 -115949121 - AluJb SINE Alu -15 297 19 254 288 168 8 chr5 87137578 87137703 -115947829 + MER5A DNA MER1_type 42 186 -3 388 269 207 0 chr5 87137903 87138048 -115947484 - MIR SINE MIR -14 248 74 249 33 0 0 chr5 87138512 87138542 -115946990 + (CA)n Simple_repeat Simple_repeat 2 31 0 472 300 7 7 chr5 87139151 87139291 -115946241 + MER117 DNA MER1_type 53 192 -5 2024 224 101 10 chr5 87139499 87140075 -115945457 - L1ME3A LINE L1 -102 6068 5441 592 290 43 39 chr5 87141309 87141564 -115943968 + MIR SINE MIR 3 258 -4 195 256 51 64 chr5 87142079 87142157 -115943375 - MIR3 SINE MIR -36 172 96 221 280 40 67 chr5 87142962 87143037 -115942495 + L2 LINE L2 3200 3272 0 2254 108 3 0 chr5 87143291 87143597 -115941935 + AluSx SINE Alu 2 308 -4 209 206 132 15 chr5 87143723 87143791 -115941741 + MIR SINE MIR 157 232 -30 2383 72 0 3 chr5 87144914 87145206 -115940326 - AluSq SINE Alu -16 297 7 413 205 70 51 chr5 87145236 87145392 -115940140 - L1ME4a LINE L1 -3 6118 5960 225 267 167 0 chr5 87147893 87148013 -115937519 - L1ME4a LINE L1 -118 6003 5864 312 70 0 0 chr5 87148381 87148424 -115937108 + (TA)n Simple_repeat Simple_repeat 2 44 0 190 281 79 22 chr5 87149056 87149145 -115936387 + MIR3 SINE MIR 112 205 -3 706 206 15 0 chr5 87149482 87149613 -115935919 + FLAM_A SINE Alu 1 133 0 1239 146 10 10 chr5 87150228 87150433 -115935099 + AluJo SINE Alu 1 205 -107 981 245 28 64 chr5 87150621 87150948 -115934584 - MER46C DNA MER2_type 0 338 24 267 229 157 36 chr5 87151303 87151386 -115934146 - MER5A DNA MER1_type -96 93 1 354 250 78 23 chr5 87152255 87152383 -115933149 + MER5B DNA MER1_type 39 173 -5 2071 100 4 7 chr5 87152491 87152794 -115932738 + AluSx SINE Alu 16 317 0 370 333 34 11 chr5 87152929 87153106 -115932426 + L2 LINE L2 2856 3036 -236 186 352 40 32 chr5 87153977 87154102 -115931430 + MIR3 SINE MIR 4 129 -79 212 189 0 0 chr5 87154442 87154479 -115931053 + (TTA)n Simple_repeat Simple_repeat 3 39 0 228 188 42 0 chr5 87155015 87155063 -115930469 + MER112 DNA MER1_type 3 52 -208 2364 84 0 0 chr5 87155163 87155459 -115930073 + AluSg SINE Alu 1 296 -14 2527 52 0 3 chr5 87155825 87156131 -115929401 + AluY SINE Alu 1 305 -6 304 220 0 0 chr5 87156174 87156233 -115929299 + MER103 DNA DNA 2 60 -106 949 87 7 14 chr5 87157646 87157784 -115927748 - AluSp SINE Alu -176 137 1 2005 222 12 63 chr5 87157875 87157893 -115927639 - L1P LINE L1 -2451 3695 3678 609 156 78 0 chr5 87157893 87158021 -115927511 - L1MA8 LINE L1 -5 6286 6149 2005 222 12 63 chr5 87158021 87158502 -115927030 - L1P LINE L1 -2468 3678 3230 2066 135 21 9 chr5 87158502 87158827 -115926705 + L1PB1 LINE L1 5822 6150 -1 2005 222 12 63 chr5 87158827 87158930 -115926602 - L1P LINE L1 -2916 3230 3123 311 296 81 81 chr5 87159470 87159778 -115925754 + L1M2 LINE L1 821 1128 -5721 789 273 138 15 chr5 87160220 87160553 -115924979 + L2 LINE L2 2124 2497 -817 1818 121 4 0 chr5 87160554 87160802 -115924730 - AluSx SINE Alu -53 259 11 1939 145 3 0 chr5 87160887 87161176 -115924356 + AluSx SINE Alu 1 290 -22 204 79 0 53 chr5 87162814 87162852 -115922680 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 2423 66 0 0 chr5 87163837 87164124 -115921408 - AluY SINE Alu -24 287 1 493 242 89 19 chr5 87164758 87164915 -115920617 + MIR SINE MIR 78 245 -17 223 288 91 15 chr5 87165320 87165386 -115920146 - MIR3 SINE MIR -7 201 131 698 208 0 0 chr5 87165980 87166100 -115919432 + FLAM_A SINE Alu 1 120 -13 28 0 0 0 chr5 87166529 87166557 -115918975 + AT_rich Low_complexity Low_complexity 1 28 0 2368 71 0 0 chr5 87166557 87166837 -115918695 - AluSg SINE Alu -30 280 1 817 130 23 23 chr5 87168874 87169005 -115916527 + AluJo SINE Alu 4 134 -178 1906 126 65 0 chr5 87169368 87169661 -115915871 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 87169711 87169735 -115915797 + AT_rich Low_complexity Low_complexity 1 24 0 2249 90 30 0 chr5 87170122 87170422 -115915110 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr5 87170422 87170451 -115915081 + (TA)n Simple_repeat Simple_repeat 2 30 0 381 335 41 12 chr5 87170745 87170915 -115914617 + MIR3 SINE MIR 19 193 -15 2239 88 30 0 chr5 87171877 87172172 -115913360 + AluSq SINE Alu 1 304 -9 381 335 41 12 chr5 87172482 87172652 -115912880 + MIR3 SINE MIR 19 193 -15 610 204 112 20 chr5 87173492 87173644 -115911888 + MLT1J LTR MaLR 346 511 0 28 0 0 0 chr5 87173646 87173674 -115911858 + AT_rich Low_complexity Low_complexity 1 28 0 199 345 0 12 chr5 87173728 87173812 -115911720 - L2 LINE L2 0 3313 3231 2167 212 27 12 chr5 87173916 87174398 -115911134 - L1M4 LINE L1 -2215 3931 3443 395 290 9 77 chr5 87174893 87175032 -115910500 + MIR SINE MIR 35 155 -107 1514 185 0 53 chr5 87175032 87175351 -115910181 - AluJo SINE Alu -10 302 1 395 290 9 77 chr5 87175351 87175432 -115910100 + MIR SINE MIR 155 240 -22 223 276 13 26 chr5 87175433 87175509 -115910023 + MIR SINE MIR 188 262 0 461 302 0 36 chr5 87176387 87176526 -115909006 - L2 LINE L2 -3 3269 3136 217 217 250 0 chr5 87176675 87176795 -115908737 - L2 LINE L2 -3 3310 3161 259 286 33 121 chr5 87177041 87177314 -115908218 - L2 LINE L2 -429 2885 2637 803 94 0 0 chr5 87178606 87178702 -115906830 + AluSg SINE Alu 33 128 -182 1513 98 5 0 chr5 87178702 87178905 -115906627 + AluSq SINE Alu 99 302 -11 2320 96 0 3 chr5 87178915 87179216 -115906316 + AluSx SINE Alu 1 300 -12 538 209 174 0 chr5 87181026 87181222 -115904310 + L1MC4 LINE L1 7006 7235 -807 2022 259 110 18 chr5 87181314 87182332 -115903200 - Charlie7 DNA MER1_type 0 2612 1427 394 160 60 30 chr5 87182471 87182571 -115902961 - Charlie7 DNA MER1_type -2470 142 40 2423 78 3 0 chr5 87182982 87183276 -115902256 + AluSc SINE Alu 1 295 -14 1689 167 14 4 chr5 87183283 87183564 -115901968 + AluJo SINE Alu 1 284 -28 378 42 0 0 chr5 87183564 87183612 -115901920 + (CA)n Simple_repeat Simple_repeat 2 49 0 1570 167 51 11 chr5 87183977 87184278 -115901254 + AluJo SINE Alu 1 312 0 414 297 136 26 chr5 87184387 87184660 -115900872 + L2 LINE L2 2922 3224 -89 2347 98 7 0 chr5 87185151 87185456 -115900076 + AluSc SINE Alu 1 307 -2 576 219 92 24 chr5 87185604 87185768 -115899764 - MIR SINE MIR -56 206 32 1875 177 3 0 chr5 87186410 87186710 -115898822 + AluJb SINE Alu 1 301 -11 5965 99 28 39 chr5 87186715 87187095 -115898437 - Tigger3b DNA MER2_type -2081 947 565 2105 136 0 0 chr5 87187095 87187389 -115898143 - AluSx SINE Alu -18 294 1 5965 99 28 39 chr5 87187389 87187548 -115897984 - Tigger3b DNA MER2_type -2463 565 406 2196 119 23 0 chr5 87187548 87187851 -115897681 - AluSx SINE Alu -2 310 1 5965 99 28 39 chr5 87187851 87188266 -115897266 - Tigger3b DNA MER2_type -2622 406 2 3525 205 107 35 chr5 87188310 87188629 -115896903 - L1MC4 LINE L1 -155 7887 7592 2320 76 0 30 chr5 87188629 87188933 -115896599 - AluY SINE Alu -16 295 1 3525 205 107 35 chr5 87188933 87189558 -115895974 - L1MC4 LINE L1 -450 7592 6875 232 321 123 19 chr5 87189813 87189919 -115895613 + MIR SINE MIR 30 146 -62 1973 148 14 7 chr5 87190260 87190557 -115894975 - AluSx SINE Alu -13 299 1 452 217 0 50 chr5 87190696 87190816 -115894716 - MIR SINE MIR -50 212 99 337 284 63 0 chr5 87190835 87190930 -115894602 + L2 LINE L2 3172 3272 0 1024 292 76 22 chr5 87191076 87191565 -115893967 + L1MC4a LINE L1 5384 5898 -1910 357 289 114 85 chr5 87191778 87192332 -115893200 + L1M2 LINE L1 754 1323 -5526 335 249 24 37 chr5 87192379 87192544 -115892988 - MIR SINE MIR -46 162 3 1592 77 14 10 chr5 87193964 87194173 -115891359 + L1PA12 LINE L1 5959 6168 0 2347 102 3 3 chr5 87194324 87194637 -115890895 + AluSq SINE Alu 1 313 0 2314 116 0 0 chr5 87195302 87195603 -115889929 - AluSx SINE Alu -11 301 1 312 258 53 68 chr5 87195739 87195871 -115889661 + L2 LINE L2 3164 3293 -20 280 178 41 41 chr5 87196214 87196287 -115889245 + LTR67 LTR ERVL 106 178 -379 410 274 85 98 chr5 87197043 87197331 -115888201 + MLT1J LTR MaLR 17 267 -183 1179 206 18 5 chr5 87197331 87197549 -115887983 - MER58A DNA MER1_type -3 221 1 410 274 85 98 chr5 87197549 87197721 -115887811 + MLT1J LTR MaLR 267 440 -10 326 274 97 8 chr5 87197986 87198110 -115887422 - L2 LINE L2 -226 3087 2953 4038 126 62 27 chr5 87198110 87198808 -115886724 - LTR1 LTR ERV1 0 785 64 444 227 76 36 chr5 87198890 87199082 -115886450 + MIR SINE MIR 2 203 -59 244 200 36 0 chr5 87199132 87199187 -115886345 - MLT1L LTR MaLR -50 565 509 378 304 16 52 chr5 87199249 87199443 -115886089 - MLT1J LTR MaLR -214 297 111 488 182 23 0 chr5 87200160 87200336 -115885196 + (CA)n Simple_repeat Simple_repeat 1 180 0 427 285 19 31 chr5 87200828 87200987 -115884545 + MIR3 SINE MIR 40 210 -47 1831 155 21 0 chr5 87201954 87202245 -115883287 + AluSx SINE Alu 1 297 -15 514 304 9 9 chr5 87202437 87202613 -115882919 + MIR SINE MIR 19 192 -62 309 283 158 33 chr5 87202688 87202840 -115882692 - L2 LINE L2 0 3272 3102 1993 118 0 14 chr5 87203918 87204206 -115881326 + AluSg SINE Alu 1 284 -26 207 291 78 43 chr5 87204615 87204756 -115880776 + MIR SINE MIR 98 243 -19 283 191 0 73 chr5 87205405 87205473 -115880059 + MIR3 SINE MIR 121 183 -25 22 56 0 0 chr5 87205473 87205509 -115880023 + AT_rich Low_complexity Low_complexity 1 36 0 1811 135 14 135 chr5 87206353 87206606 -115878926 - MLT1A1 LTR MaLR 0 365 178 1834 107 12 0 chr5 87206606 87206877 -115878655 - AluSg SINE Alu 0 309 36 1811 135 14 135 chr5 87206877 87207036 -115878496 - MLT1A1 LTR MaLR -187 178 1 344 241 20 89 chr5 87207241 87207444 -115878088 - HAL1b LINE L1 -414 934 746 2187 110 3 22 chr5 87207739 87208058 -115877474 + AluSq SINE Alu 1 313 0 235 109 0 0 chr5 87209342 87209388 -115876144 + LTR66 LTR ERVL 394 439 -171 28 29 0 0 chr5 87209669 87209704 -115875828 + AT_rich Low_complexity Low_complexity 1 35 0 2073 137 0 0 chr5 87210238 87210530 -115875002 + AluJb SINE Alu 1 292 -20 432 0 0 0 chr5 87210699 87210747 -115874785 + (TG)n Simple_repeat Simple_repeat 1 48 0 219 69 0 0 chr5 87210750 87210779 -115874753 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 260 340 50 30 chr5 87211087 87211187 -115874345 - L2 LINE L2 -22 3250 3149 900 312 40 12 chr5 87211191 87211518 -115874014 - MARNA DNA Mariner -190 396 61 2372 81 3 0 chr5 87211518 87211815 -115873717 + AluSx SINE Alu 1 298 -14 1787 124 8 11 chr5 87212033 87212299 -115873233 + AluSx SINE Alu 1 265 -47 649 239 78 63 chr5 87212460 87212715 -115872817 - MIR SINE MIR 0 262 4 543 320 103 29 chr5 87212945 87213257 -115872275 - L3 LINE CR1 -14 1563 1229 622 222 84 6 chr5 87213306 87213473 -115872059 + MIR SINE MIR 64 243 -19 274 361 17 0 chr5 87213504 87213623 -115871909 - L3 LINE CR1 -402 1175 1055 1479 127 48 22 chr5 87213818 87214082 -115871450 + AluJb SINE Alu 73 312 0 791 299 138 11 chr5 87214993 87215444 -115870088 + L1MC4a LINE L1 5372 5879 -1929 308 171 159 11 chr5 87215749 87215837 -115869695 + L1MC5 LINE L1 7316 7416 -545 271 233 167 0 chr5 87215902 87215992 -115869540 + L1MC4 LINE L1 7629 7733 -309 201 121 0 0 chr5 87216880 87216913 -115868619 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 2105 133 7 0 chr5 87217017 87217325 -115868207 - AluSq SINE Alu -3 310 1 246 236 181 0 chr5 87217403 87217475 -115868057 + L2 LINE L2 3229 3313 0 2044 158 0 3 chr5 87217833 87218143 -115867389 + AluJb SINE Alu 1 309 -3 43877 32 23 1 chr5 87218251 87224270 -115861262 - L1PA3 LINE L1 0 6155 1 239 0 0 31 chr5 87224493 87224525 -115861007 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 266 258 32 0 chr5 87224525 87224587 -115860945 - L2 LINE L2 -8 3305 3242 507 175 107 0 chr5 87224587 87224690 -115860842 - MER81 DNA DNA 0 114 1 965 281 131 16 chr5 87224709 87225139 -115860393 - L2 LINE L2 -233 3080 2609 519 272 129 13 chr5 87225371 87225603 -115859929 + MIR SINE MIR 4 262 0 2361 100 3 0 chr5 87226054 87226363 -115859169 - AluSg SINE Alu 0 310 1 1364 197 0 19 chr5 87226553 87226822 -115858710 + AluJo SINE Alu 34 297 -15 1068 234 69 7 chr5 87227458 87227749 -115857783 - L1ME3A LINE L1 -1 6169 5861 467 156 220 18 chr5 87227951 87228060 -115857472 - MIR SINE MIR -112 150 20 1745 73 3 60 chr5 87228276 87228576 -115856956 - AluSg SINE Alu -27 283 1 355 303 17 8 chr5 87228576 87228695 -115856837 + MER103 DNA DNA 46 165 -1 24 0 0 0 chr5 87228838 87228862 -115856670 + AT_rich Low_complexity Low_complexity 1 24 0 209 163 20 0 chr5 87229039 87229088 -115856444 + (TA)n Simple_repeat Simple_repeat 2 51 0 840 255 49 97 chr5 87229154 87229620 -115855912 - L2 LINE L2 -1028 2286 1843 417 20 0 0 chr5 87229852 87229902 -115855630 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 2078 122 0 11 chr5 87229902 87230189 -115855343 - AluSx SINE Alu -28 284 1 2219 177 18 31 chr5 87230208 87230605 -115854927 + L1MB4 LINE L1 5729 6121 -59 871 169 0 0 chr5 87230605 87230735 -115854797 + FLAM_C SINE Alu 2 131 -2 2219 177 18 31 chr5 87230735 87230789 -115854743 + L1MB4 LINE L1 6121 6174 -6 21 36 0 0 chr5 87231469 87231497 -115854035 + AT_rich Low_complexity Low_complexity 1 28 0 2175 115 0 10 chr5 87231513 87231817 -115853715 + AluSc SINE Alu 1 301 -8 1770 148 20 36 chr5 87231995 87232298 -115853234 + AluJb SINE Alu 2 299 -13 419 324 50 7 chr5 87232870 87233009 -115852523 + MIR3 SINE MIR 35 179 -29 2078 226 23 70 chr5 87233362 87233923 -115851609 - MLT1F LTR MaLR -7 535 1 25 31 0 0 chr5 87234544 87234576 -115850956 + AT_rich Low_complexity Low_complexity 1 32 0 2056 139 0 31 chr5 87234576 87234893 -115850639 + AluSx SINE Alu 1 307 -5 430 333 43 0 chr5 87235037 87235178 -115850354 - L2 LINE L2 -38 3275 3129 184 343 27 0 chr5 87235458 87235531 -115850001 - L2 LINE L2 -9 3263 3189 1891 139 0 50 chr5 87236223 87236526 -115849006 + AluSx SINE Alu 5 292 -20 3576 123 55 2 chr5 87236633 87237195 -115848337 + Tigger4(Zombi) DNA MER2_type 1960 2551 -180 584 250 129 30 chr5 87237853 87238085 -115847447 + MER112 DNA MER1_type 2 256 0 267 191 21 0 chr5 87238782 87238829 -115846703 + LTR35 LTR ERV1 444 491 -127 2079 121 28 0 chr5 87238843 87239132 -115846400 + AluSx SINE Alu 1 297 -15 191 269 45 0 chr5 87239738 87239805 -115845727 - MIR3 SINE MIR -21 187 118 263 310 7 35 chr5 87240342 87240487 -115845045 + GA-rich Low_complexity Low_complexity 4 144 0 290 64 64 0 chr5 87240840 87240887 -115844645 + MER66A LTR ERV1 429 478 0 336 102 0 0 chr5 87241110 87241159 -115844373 + (CAA)n Simple_repeat Simple_repeat 3 51 0 960 106 0 0 chr5 87241321 87241453 -115844079 + AluYa5 SINE Alu 1 132 -179 26 0 0 0 chr5 87241782 87241808 -115843724 + AT_rich Low_complexity Low_complexity 1 26 0 2189 87 0 11 chr5 87241808 87242094 -115843438 - AluSq SINE Alu -30 283 1 312 102 0 0 chr5 87242143 87242192 -115843340 + (CCTA)n Simple_repeat Simple_repeat 4 52 0 216 86 0 0 chr5 87243287 87243322 -115842210 + (T)n Simple_repeat Simple_repeat 1 35 0 2618 58 0 0 chr5 87244234 87244544 -115840988 - AluY SINE Alu 0 311 2 1353 218 66 6 chr5 87244549 87244866 -115840666 - Charlie2 DNA MER1_type -636 2226 1891 1013 184 77 10 chr5 87244871 87245067 -115840465 + AluJo SINE Alu 84 292 -20 505 274 35 132 chr5 87245070 87245410 -115840122 - Charlie2 DNA MER1_type -2511 351 45 258 277 46 0 chr5 87245915 87245980 -115839552 - L2 LINE L2 -1 3271 3204 340 212 169 79 chr5 87246028 87246047 -115839485 + MIR SINE MIR 11 27 -235 2093 119 10 0 chr5 87246047 87246340 -115839192 + AluSq SINE Alu 1 296 -17 340 212 169 79 chr5 87246340 87246509 -115839023 + MIR SINE MIR 27 216 -46 237 250 29 44 chr5 87246550 87246618 -115838914 + L2 LINE L2 3206 3272 0 624 211 0 84 chr5 87246692 87246834 -115838698 + FLAM_A SINE Alu 4 133 0 2679 3 0 17 chr5 87247326 87247621 -115837911 + AluYa5 SINE Alu 22 311 0 2252 124 0 3 chr5 87247638 87247945 -115837587 + AluSx SINE Alu 1 306 -6 2239 118 3 3 chr5 87250862 87251168 -115834364 - AluSx SINE Alu -6 306 1 624 211 0 84 chr5 87251663 87251805 -115833727 - FLAM_A SINE Alu 0 133 4 237 250 29 44 chr5 87251879 87251947 -115833585 - L2 LINE L2 0 3272 3206 347 206 175 85 chr5 87251988 87252157 -115833375 - MIR SINE MIR -46 216 27 2077 123 10 0 chr5 87252157 87252450 -115833082 - AluSq SINE Alu -17 296 1 347 206 175 85 chr5 87252450 87252469 -115833063 - MIR SINE MIR -235 27 11 258 277 46 0 chr5 87252517 87252582 -115832950 + L2 LINE L2 3204 3271 -1 505 274 35 132 chr5 87253086 87253426 -115832106 + Charlie2 DNA MER1_type 45 351 -2431 1013 184 77 10 chr5 87253429 87253625 -115831907 - AluJo SINE Alu -20 292 84 2018 193 63 99 chr5 87253630 87253952 -115831580 + Charlie2 DNA MER1_type 1891 2223 -639 2618 58 0 0 chr5 87253952 87254262 -115831270 + AluY SINE Alu 2 311 0 2018 193 63 99 chr5 87254262 87254308 -115831224 + Charlie2 DNA MER1_type 2223 2269 -593 2241 82 10 3 chr5 87254308 87254599 -115830933 + AluSp SINE Alu 1 293 -20 2018 193 63 99 chr5 87254599 87254768 -115830764 + Charlie2 DNA MER1_type 2269 2401 -461 2018 130 3 3 chr5 87254768 87255052 -115830480 - AluSx SINE Alu -27 285 2 2018 193 63 99 chr5 87255052 87255206 -115830326 + Charlie2 DNA MER1_type 2401 2559 -303 417 280 70 30 chr5 87255305 87255461 -115830071 + Charlie2 DNA MER1_type 2551 2699 -163 2417 91 0 0 chr5 87255461 87255769 -115829763 + AluSg SINE Alu 1 308 -2 417 280 70 30 chr5 87255769 87255912 -115829620 + Charlie2 DNA MER1_type 2699 2862 0 298 318 71 15 chr5 87256171 87256369 -115829163 - L2 LINE L2 0 3313 3105 442 255 0 0 chr5 87256399 87256493 -115829039 + MER69 DNA AcHobo 1 94 -1132 326 112 56 9 chr5 87256540 87256647 -115828885 + (CA)n Simple_repeat Simple_repeat 1 112 0 1938 161 90 47 chr5 87256661 87256822 -115828710 + MER69 DNA AcHobo 1995 2148 -378 1323 147 12 164 chr5 87256822 87257163 -115828369 + AluJo SINE Alu 3 291 -11 1938 161 90 47 chr5 87257163 87257238 -115828294 + MER69 DNA AcHobo 2148 2218 -308 2141 69 48 14 chr5 87257238 87257529 -115828003 - AluY SINE Alu -10 301 1 1938 161 90 47 chr5 87257529 87257801 -115827731 + MER69 DNA AcHobo 2218 2526 0 1821 180 3 3 chr5 87258331 87258625 -115826907 - AluJb SINE Alu -18 294 1 327 260 10 10 chr5 87258740 87258844 -115826688 + CT-rich Low_complexity Low_complexity 1 104 0 350 285 227 62 chr5 87258846 87259286 -115826246 - L2 LINE L2 -16 3256 2752 1243 255 77 11 chr5 87259425 87259836 -115825696 - L1MC4a LINE L1 -156 5965 5532 324 225 11 22 chr5 87259841 87259930 -115825602 - L1MC4a LINE L1 -2351 5457 5370 271 294 185 8 chr5 87260002 87260121 -115825411 - L2 LINE L2 -1 3271 3132 1942 133 18 0 chr5 87260161 87260476 -115825056 + AluSx SINE Alu 1 320 0 323 156 0 0 chr5 87260773 87260818 -115824714 + Alu SINE Alu 1 45 -263 504 183 0 12 chr5 87260997 87261079 -115824453 + AluJ/FLAM SINE Alu 2 82 -230 350 222 157 100 chr5 87261094 87261324 -115824208 - LTR33A LTR ERVL -276 247 5 232 369 18 0 chr5 87261415 87261526 -115824006 + L2 LINE L2 2553 2665 -649 903 195 13 0 chr5 87261968 87262127 -115823405 - AluJb SINE Alu -12 300 140 845 190 92 0 chr5 87262202 87262365 -115823167 + MER58A DNA MER1_type 46 223 -1 243 259 52 0 chr5 87262388 87262446 -115823086 + L2 LINE L2 3204 3264 -8 1229 124 34 149 chr5 87262534 87262889 -115822643 + L1MA4 LINE L1 4135 4448 -1698 1238 113 0 0 chr5 87262898 87263058 -115822474 + AluSg/x SINE Alu 135 294 -16 1911 94 0 250 chr5 87263076 87263350 -115822182 + L1MA4 LINE L1 4485 4538 -1608 2160 122 10 0 chr5 87263350 87263646 -115821886 + AluSx SINE Alu 1 299 -13 1911 94 0 250 chr5 87263646 87263954 -115821578 + L1MA4 LINE L1 4538 4921 -1225 5148 162 46 42 chr5 87264081 87264280 -115821252 + L1MA4 LINE L1 4906 5103 -1197 1815 149 3 17 chr5 87264280 87264582 -115820950 + AluSp SINE Alu 1 298 -15 5148 162 46 42 chr5 87264582 87265117 -115820415 + L1MA4 LINE L1 5103 5635 -665 275 0 29 0 chr5 87265117 87265152 -115820380 + (TA)n Simple_repeat Simple_repeat 2 37 0 5148 162 46 42 chr5 87265152 87265317 -115820215 + L1MA4 LINE L1 5635 5798 -502 1877 136 59 0 chr5 87265317 87265604 -115819928 + AluJb SINE Alu 1 304 -8 5148 162 46 42 chr5 87265604 87265897 -115819635 + L1MA4 LINE L1 5798 6111 -189 2197 103 37 0 chr5 87265897 87266197 -115819335 - AluSx SINE Alu -1 311 1 5148 162 46 42 chr5 87266197 87266381 -115819151 + L1MA4 LINE L1 6111 6293 -7 2268 91 7 3 chr5 87266687 87266985 -115818547 + AluSq SINE Alu 1 299 -14 468 183 98 0 chr5 87267304 87267386 -115818146 - FLAM_A SINE Alu -52 90 1 1610 184 0 21 chr5 87267416 87267698 -115817834 - AluJo SINE Alu -36 276 1 2196 114 17 0 chr5 87267712 87268009 -115817523 - AluSx SINE Alu -10 302 1 285 277 52 12 chr5 87268106 87268222 -115817310 + L1ME LINE L1 5508 5631 -490 768 186 0 8 chr5 87268226 87268355 -115817177 - FLAM_A SINE Alu -3 130 3 1705 149 14 11 chr5 87268572 87268887 -115816645 - AluSx SINE Alu 0 316 1 1829 103 3 134 chr5 87268915 87269274 -115816258 + AluSq SINE Alu 1 312 -1 696 244 23 12 chr5 87270224 87270396 -115815136 - MER5B DNA MER1_type -1 177 4 1705 179 0 32 chr5 87271023 87271335 -115814197 - AluJb SINE Alu -10 302 1 1240 116 21 0 chr5 87271336 87271526 -115814006 - L1MA5 LINE L1 -2 6298 6105 380 107 80 13 chr5 87271832 87271907 -115813625 - L1MC5 LINE L1 -34 7927 7848 2294 97 0 7 chr5 87272025 87272323 -115813209 + AluSq SINE Alu 1 296 -17 2371 102 0 0 chr5 87272414 87272718 -115812814 - AluSq SINE Alu -9 304 1 670 250 66 126 chr5 87272777 87272971 -115812561 - L2 LINE L2 -6 3307 3103 1764 148 14 11 chr5 87272971 87273254 -115812278 + AluSx SINE Alu 3 286 -26 670 250 66 126 chr5 87273254 87273511 -115812021 - L2 LINE L2 -210 3103 2883 2254 92 3 0 chr5 87276546 87276864 -115808668 + AluSq SINE Alu 1 319 0 207 191 44 103 chr5 87277281 87277349 -115808183 + MIR SINE MIR 16 79 -129 418 261 22 60 chr5 87277502 87277636 -115807896 + MIR SINE MIR 16 144 -64 246 206 16 16 chr5 87278161 87278224 -115807308 + L2 LINE L2 2225 2287 -1027 370 236 0 65 chr5 87278894 87279017 -115806515 + L1MC4 LINE L1 6589 6703 -1339 419 250 6 0 chr5 87279019 87279183 -115806349 + (TA)n Simple_repeat Simple_repeat 2 166 0 319 214 0 82 chr5 87279188 87279286 -115806246 + L1MC4 LINE L1 6614 6703 -1339 235 250 0 0 chr5 87279290 87279346 -115806186 + (TA)n Simple_repeat Simple_repeat 2 57 0 318 296 16 48 chr5 87279347 87279472 -115806060 + L1MC4 LINE L1 6583 6703 -1339 408 142 18 35 chr5 87279476 87279589 -115805943 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 256 286 0 0 chr5 87279591 87279682 -115805850 + L1MC4 LINE L1 6613 6703 -1339 352 247 22 0 chr5 87279707 87279796 -115805736 + L1MC4 LINE L1 6613 6703 -1339 204 235 0 0 chr5 87279800 87279868 -115805664 + (TA)n Simple_repeat Simple_repeat 2 69 0 357 261 0 22 chr5 87279874 87279966 -115805566 + L1MC4 LINE L1 6614 6703 -1339 317 260 0 58 chr5 87279985 87280089 -115805443 + L1MC4 LINE L1 6613 6710 -1332 1355 165 145 0 chr5 87280089 87280338 -115805194 - AluJb SINE Alu -27 285 1 267 31 0 0 chr5 87280856 87280888 -115804644 + (TA)n Simple_repeat Simple_repeat 1 32 0 1325 263 17 48 chr5 87280952 87281370 -115804162 + L2 LINE L2 2349 2753 -561 771 283 68 33 chr5 87281372 87281853 -115803679 + LTR16A LTR ERVL 1 451 -13 714 254 85 28 chr5 87281868 87281988 -115803544 + L2 LINE L2 3047 3159 -154 192 77 0 0 chr5 87281988 87282014 -115803518 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 714 254 85 28 chr5 87282014 87282141 -115803391 + L2 LINE L2 3159 3308 -5 1820 179 125 15 chr5 87282461 87282870 -115802662 + MSTB2 LTR MaLR 3 456 -1 732 257 53 119 chr5 87282977 87283238 -115802294 + L2 LINE L2 2883 3103 -210 1845 156 3 14 chr5 87283238 87283526 -115802006 - AluSx SINE Alu -25 287 3 732 257 53 119 chr5 87283526 87283719 -115801813 + L2 LINE L2 3103 3307 -6 24 32 0 0 chr5 87284057 87284088 -115801444 + GC_rich Low_complexity Low_complexity 1 31 0 773 181 55 11 chr5 87284198 87284380 -115801152 + L1 LINE L1 2851 3040 -3106 2372 93 6 3 chr5 87284381 87284693 -115800839 + AluSp SINE Alu 1 313 0 1982 127 76 39 chr5 87284695 87285050 -115800482 + L1MA2 LINE L1 5935 6302 -2 1005 178 0 0 chr5 87285053 87285210 -115800322 + AluJb SINE Alu 129 285 -27 1604 161 79 168 chr5 87285388 87286020 -115799512 - LTR8A LTR ERV1 -118 609 34 245 233 105 35 chr5 87286371 87286457 -115799075 + LTR16B LTR ERVL 2 93 -371 195 42 0 0 chr5 87286854 87286878 -115798654 + (A)n Simple_repeat Simple_repeat 1 24 0 446 310 75 9 chr5 87287446 87287659 -115797873 - MIR SINE MIR 0 262 36 833 438 29 49 chr5 87288202 87288510 -115797022 + AluSx SINE Alu 1 302 0 1974 154 0 3 chr5 87288988 87289299 -115796233 + AluSx SINE Alu 1 310 -2 1205 118 0 11 chr5 87289300 87289478 -115796054 + AluSg/x SINE Alu 122 297 -15 1555 148 67 34 chr5 87289506 87289803 -115795729 + AluJb SINE Alu 3 309 -3 357 309 100 13 chr5 87289900 87290130 -115795402 - L1MC4 LINE L1 0 8042 7793 668 204 161 58 chr5 87290139 87290364 -115795168 + MER97b DNA MER1_type? 14 271 -782 2083 125 10 3 chr5 87290364 87290653 -115794879 - AluSx SINE Alu -21 291 1 668 204 161 58 chr5 87290653 87290687 -115794845 + MER97b DNA MER1_type? 271 300 -753 1109 137 19 34 chr5 87290823 87291028 -115794504 - AluSx SINE Alu -110 202 1 1351 134 0 42 chr5 87291028 87291311 -115794221 - L1 LINE L1 -1391 4755 4485 1690 161 0 47 chr5 87291337 87291636 -115793896 - AluSx SINE Alu -27 285 1 1645 116 0 33 chr5 87291652 87291840 -115793692 - AluSg/x SINE Alu 0 312 141 2161 119 0 7 chr5 87291840 87292210 -115793322 - AluSg SINE Alu 0 310 1 1645 116 0 33 chr5 87292210 87292284 -115793248 - AluSg/x SINE Alu -171 141 66 2322 82 3 7 chr5 87292336 87292627 -115792905 - AluSx SINE Alu -22 290 1 386 184 10 87 chr5 87292788 87292891 -115792641 - AluJb SINE Alu -17 285 191 257 111 37 0 chr5 87293005 87293059 -115792473 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 349 256 0 22 chr5 87293062 87293152 -115792380 - L1MC4 LINE L1 -1340 6702 6615 379 230 6 12 chr5 87293157 87293318 -115792214 + (CATATA)n Simple_repeat Simple_repeat 6 165 0 241 286 0 0 chr5 87293343 87293434 -115792098 - L1MC4 LINE L1 -1339 6703 6613 234 214 0 36 chr5 87293435 87293491 -115792041 + (TATG)n Simple_repeat Simple_repeat 4 57 0 328 269 0 21 chr5 87293491 87293584 -115791948 - L1MC4 LINE L1 -1339 6703 6613 302 248 0 7 chr5 87293595 87293732 -115791800 + (TA)n Simple_repeat Simple_repeat 2 137 0 309 242 0 63 chr5 87293735 87293830 -115791702 - L1MC4 LINE L1 -1340 6702 6614 306 135 0 56 chr5 87293836 87293925 -115791607 + (TATATG)n Simple_repeat Simple_repeat 2 85 0 350 254 0 57 chr5 87293951 87294073 -115791459 - L1MC4 LINE L1 -1339 6703 6589 226 206 16 16 chr5 87294749 87294812 -115790720 - L2 LINE L2 -1027 2287 2225 189 0 0 0 chr5 87295475 87295496 -115790036 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 1826 94 28 35 chr5 87295506 87295794 -115789738 - AluY SINE Alu -25 286 1 390 269 167 6 chr5 87295937 87296093 -115789439 - MER5A DNA MER1_type 0 189 9 2281 95 13 7 chr5 87296348 87296652 -115788880 - AluSq SINE Alu -7 306 1 583 67 50 45 chr5 87296952 87297131 -115788401 + (TA)n Simple_repeat Simple_repeat 1 180 0 233 191 32 0 chr5 87297131 87297194 -115788338 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 491 32 43 80 chr5 87297195 87297382 -115788150 + (TA)n Simple_repeat Simple_repeat 1 180 0 369 158 30 0 chr5 87297427 87297528 -115788004 + (TA)n Simple_repeat Simple_repeat 1 104 0 303 159 0 0 chr5 87297531 87297575 -115787957 + AluJb SINE Alu 209 252 -50 1313 134 0 47 chr5 87297578 87297605 -115787927 + AluY SINE Alu 88 115 -196 192 40 0 0 chr5 87297605 87297630 -115787902 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1313 134 0 47 chr5 87297630 87297646 -115787886 + AluY SINE Alu 115 130 -181 2158 81 0 49 chr5 87297646 87297954 -115787578 + AluSq SINE Alu 1 293 -20 2615 53 3 0 chr5 87297956 87298260 -115787272 + AluY SINE Alu 1 305 -6 1313 134 0 47 chr5 87298260 87298444 -115787088 + AluY SINE Alu 131 308 -3 299 11 0 144 chr5 87298444 87298618 -115786914 + (GGGAA)n Simple_repeat Simple_repeat 2 150 0 1220 43 4 35 chr5 87298672 87298938 -115786594 + (GGGAA)n Simple_repeat Simple_repeat 1 257 0 245 215 21 43 chr5 87298939 87299032 -115786500 + GA-rich Low_complexity Low_complexity 5 95 0 266 279 0 13 chr5 87300312 87300391 -115785141 - MIR SINE MIR 0 262 185 988 210 33 37 chr5 87300393 87300636 -115784896 + MIR SINE MIR 12 253 -9 2258 102 0 0 chr5 87300669 87300954 -115784578 - AluSx SINE Alu -27 285 1 270 210 0 48 chr5 87300954 87301016 -115784516 - MIR SINE MIR -108 154 96 773 164 8 15 chr5 87301138 87301272 -115784260 - FLAM_A SINE Alu 0 133 1 845 178 13 32 chr5 87301428 87301585 -115783947 - FAM SINE Alu -18 167 14 22 70 0 0 chr5 87301760 87301803 -115783729 + AT_rich Low_complexity Low_complexity 1 43 0 43 25 0 25 chr5 87301830 87301857 -115783675 + AT_rich Low_complexity Low_complexity 1 27 -50 1836 164 13 10 chr5 87301857 87302156 -115783376 + AluJo SINE Alu 1 300 -12 43 25 0 25 chr5 87302156 87302193 -115783339 + AT_rich Low_complexity Low_complexity 27 65 -12 2298 88 0 10 chr5 87302193 87302487 -115783045 + AluSg SINE Alu 1 291 -19 43 25 0 25 chr5 87302487 87302500 -115783032 + AT_rich Low_complexity Low_complexity 65 77 0 201 196 0 0 chr5 87302524 87302570 -115782962 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 1438 54 5 39 chr5 87303024 87303228 -115782304 + AluY SINE Alu 113 309 -2 1308 120 16 0 chr5 87303245 87303429 -115782103 + AluSg/x SINE Alu 109 295 -15 1763 154 11 4 chr5 87303437 87303717 -115781815 - AluJo SINE Alu -30 282 1 1426 161 62 4 chr5 87303991 87304265 -115781267 - L1MC1 LINE L1 -5 6328 6039 23 54 0 0 chr5 87304270 87304307 -115781225 + AT_rich Low_complexity Low_complexity 1 37 0 2332 199 57 48 chr5 87304564 87305124 -115780408 - MER92B LTR ERV1 -1 635 67 2147 135 0 0 chr5 87305124 87305427 -115780105 - AluSx SINE Alu -9 303 1 2332 199 57 48 chr5 87305427 87305495 -115780037 - MER92B LTR ERV1 -569 67 1 752 191 8 0 chr5 87305768 87305899 -115779633 + FLAM_C SINE Alu 1 132 -1 21 0 0 0 chr5 87305917 87305938 -115779594 + AT_rich Low_complexity Low_complexity 1 21 0 2096 86 0 15 chr5 87305974 87306243 -115779289 - AluSg1 SINE Alu -43 266 2 462 287 13 0 chr5 87306342 87306492 -115779040 - MER103 DNA DNA 0 166 15 1544 186 21 0 chr5 87306541 87306831 -115778701 - AluJb SINE Alu -9 303 8 1160 143 91 8 chr5 87307159 87307424 -115778108 - L1MA4 LINE L1 -1 6299 6013 1936 150 47 125 chr5 87307688 87308280 -115777252 - L1MC2 LINE L1 -1 6343 5798 744 179 0 0 chr5 87308280 87308403 -115777129 - FLAM_C SINE Alu -16 127 5 678 138 28 0 chr5 87308407 87308516 -115777016 - L1MC2 LINE L1 -516 5828 5717 364 253 58 19 chr5 87308627 87308781 -115776751 + LTR16B LTR ERVL 291 450 -14 1915 154 3 3 chr5 87308781 87309079 -115776453 - AluJb SINE Alu -14 298 1 784 172 8 0 chr5 87309302 87309430 -115776102 - FLAM_C SINE Alu -4 129 1 228 150 50 0 chr5 87309488 87309528 -115776004 - MER57A LTR ERV1 -67 336 295 694 159 6 145 chr5 87309669 87310020 -115775512 + AluYb8 SINE Alu 1 302 -6 1361 164 0 9 chr5 87310108 87310334 -115775198 - AluJb SINE Alu -88 224 1 1873 137 7 14 chr5 87310392 87310684 -115774848 + AluJb SINE Alu 1 290 -22 530 160 70 0 chr5 87310703 87310803 -115774729 + 7SLRNA srpRNA srpRNA 213 319 -1 1348 277 71 8 chr5 87311465 87312087 -115773445 + HERV16 LTR ERVL 1029 1799 -3197 378 0 0 0 chr5 87312518 87312560 -115772972 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 405 0 0 0 chr5 87312639 87312684 -115772848 + (TG)n Simple_repeat Simple_repeat 2 46 0 259 262 145 28 chr5 87313147 87313292 -115772240 - MIR3 SINE MIR -8 200 39 890 145 0 0 chr5 87313687 87313818 -115771714 - FLAM_C SINE Alu -1 132 2 432 310 142 31 chr5 87314301 87314653 -115770879 - L2 LINE L2 0 3313 2923 2161 102 7 0 chr5 87314692 87314995 -115770537 + AluSq SINE Alu 1 305 0 881 20 0 0 chr5 87315002 87315101 -115770431 + HY3 scRNA scRNA 2 100 -1 341 287 86 62 chr5 87315249 87315573 -115769959 - L2 LINE L2 -809 2505 2174 22 35 0 0 chr5 87315573 87315602 -115769930 + AT_rich Low_complexity Low_complexity 1 29 0 302 0 0 26 chr5 87315811 87315850 -115769682 + (TG)n Simple_repeat Simple_repeat 2 39 0 1688 169 0 21 chr5 87315876 87316160 -115769372 - AluJo SINE Alu -30 282 5 2084 136 13 0 chr5 87316488 87316789 -115768743 - AluSx SINE Alu -7 305 1 1789 147 31 21 chr5 87316812 87317098 -115768434 - AluJo SINE Alu -23 289 1 223 298 50 71 chr5 87317389 87317530 -115768002 - L2 LINE L2 -12 3301 3164 2210 141 42 60 chr5 87317848 87317896 -115767636 - MSTA LTR MaLR -2 426 379 2288 68 36 0 chr5 87317896 87318206 -115767326 - AluSp SINE Alu 0 320 1 2210 141 42 60 chr5 87318206 87318530 -115767002 - MSTA LTR MaLR -49 379 59 2484 68 0 19 chr5 87318530 87318841 -115766691 - AluY SINE Alu -6 305 1 2210 141 42 60 chr5 87318841 87318899 -115766633 - MSTA LTR MaLR -369 59 1 399 231 73 25 chr5 87318919 87319084 -115766448 - HAL1b LINE L1 -2 6119 1186 2491 81 0 0 chr5 87319128 87319467 -115766065 - AluSc SINE Alu 0 339 1 2187 95 0 0 chr5 87319678 87319993 -115765539 + AluSx SINE Alu 1 315 0 2091 111 3 10 chr5 87320029 87320336 -115765196 - AluSx SINE Alu -7 305 1 1529 83 10 10 chr5 87320338 87320543 -115764989 - AluSc SINE Alu -15 294 90 1059 136 40 6 chr5 87320767 87320943 -115764589 - AluY SINE Alu -129 182 1 751 78 78 0 chr5 87320943 87321058 -115764474 - L1M1 LINE L1 -4404 3161 3038 1088 190 138 0 chr5 87321058 87321290 -115764242 - AluJb SINE Alu -18 294 31 512 122 6 117 chr5 87321298 87321478 -115764054 - AluSg/x SINE Alu -9 303 144 608 113 0 106 chr5 87321510 87321651 -115763881 - AluSg SINE Alu -180 130 5 11566 123 55 39 chr5 87321660 87322538 -115762994 - L1M1 LINE L1 -4522 3043 2181 1828 117 0 0 chr5 87322538 87322786 -115762746 - AluSq SINE Alu -65 248 1 11566 123 55 39 chr5 87322786 87323911 -115761621 - L1M1 LINE L1 -5384 2181 1008 593 219 34 0 chr5 87323973 87324092 -115761440 - FLAM_C SINE Alu -10 123 1 502 211 109 39 chr5 87324159 87324315 -115761217 - FRAM SINE Alu -11 165 1 1128 110 0 26 chr5 87324429 87324628 -115760904 - AluSg/x SINE Alu 0 326 132 1649 201 7 3 chr5 87324709 87325007 -115760525 + AluJb SINE Alu 1 299 -13 2157 123 3 0 chr5 87325157 87325450 -115760082 - AluSq SINE Alu -19 294 1 256 85 220 0 chr5 87325699 87325750 -115759782 - AluJb SINE Alu -1 301 238 7399 164 60 71 chr5 87325750 87327321 -115758211 - MER52A LTR ERV1 0 1755 202 298 217 17 0 chr5 87327762 87327822 -115757710 - MER52A LTR ERV1 -1692 63 3 1517 157 0 39 chr5 87327823 87328078 -115757454 - AluJb SINE Alu -67 245 1 1688 147 51 13 chr5 87328423 87328735 -115756797 + MER4A LTR ERV1 1 324 -340 1051 172 28 0 chr5 87328756 87328767 -115756765 + AluJb SINE Alu 110 119 -193 189 0 0 0 chr5 87328767 87328788 -115756744 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1051 172 28 0 chr5 87328788 87328956 -115756576 + AluJb SINE Alu 119 294 -18 434 113 289 31 chr5 87329038 87329135 -115756397 + MER4C LTR ERV1 294 415 -50 1349 106 0 0 chr5 87329142 87329312 -115756220 - AluSx SINE Alu -142 170 1 386 234 37 9 chr5 87330649 87330756 -115754776 - LTR23 LTR ERV1 -5 432 323 1534 167 60 4 chr5 87330775 87331056 -115754476 - AluJb SINE Alu -7 305 9 829 171 159 91 chr5 87331071 87331187 -115754345 - AluJo SINE Alu -21 291 184 2233 91 39 0 chr5 87331187 87331472 -115754060 - AluSq SINE Alu -17 296 1 1753 187 0 7 chr5 87331472 87331772 -115753760 - AluJb SINE Alu -14 298 1 829 171 159 91 chr5 87331772 87331906 -115753626 - AluJo SINE Alu -127 185 23 206 292 46 69 chr5 87332099 87332136 -115753396 + MIR SINE MIR 126 162 -100 2363 101 10 0 chr5 87332136 87332443 -115753089 + AluSg SINE Alu 1 310 0 206 292 46 69 chr5 87332443 87332535 -115752997 + MIR SINE MIR 162 252 -10 1503 213 42 60 chr5 87332690 87333156 -115752376 + MER39 LTR ERV1 12 698 -9 230 407 52 5 chr5 87333161 87333355 -115752177 + L3 LINE CR1 1321 1523 -54 627 268 71 25 chr5 87334059 87334507 -115751025 + LTR33 LTR ERVL 1 513 -8 1948 166 0 0 chr5 87334835 87335136 -115750396 + AluJb SINE Alu 1 301 -11 1745 125 7 39 chr5 87335238 87335519 -115750013 + AluSx SINE Alu 24 295 -17 2049 134 21 3 chr5 87335668 87335958 -115749574 + AluSx SINE Alu 1 295 -17 2311 110 0 3 chr5 87335960 87336382 -115749150 + AluY SINE Alu 3 423 0 754 197 0 0 chr5 87336460 87336592 -115748940 + FLAM_A SINE Alu 2 133 0 627 245 82 6 chr5 87336643 87336802 -115748730 - MLT1F LTR MaLR -371 171 1 1841 157 0 42 chr5 87336920 87337232 -115748300 + AluJb SINE Alu 1 299 -13 1751 161 3 41 chr5 87338167 87338483 -115747049 + AluJb SINE Alu 1 304 -8 514 322 37 19 chr5 87338674 87338888 -115746644 + MLT1H LTR MaLR 86 303 -246 399 214 23 84 chr5 87338925 87338995 -115746537 + MLT1H LTR MaLR 464 524 -71 2113 80 80 3 chr5 87338995 87339284 -115746248 - AluY SINE Alu 0 311 1 399 214 23 84 chr5 87339284 87339344 -115746188 + MLT1H LTR MaLR 524 586 -9 1741 199 0 0 chr5 87339351 87339647 -115745885 + AluSx SINE Alu 1 296 -16 2579 81 0 0 chr5 87339653 87339963 -115745569 + AluSg SINE Alu 1 310 0 2006 144 30 0 chr5 87339966 87340264 -115745268 + AluSx SINE Alu 2 308 -4 366 330 9 9 chr5 87340535 87340650 -115744882 - MER5B DNA MER1_type 0 178 64 2263 115 0 10 chr5 87340899 87341213 -115744319 - AluSx SINE Alu -1 311 1 1441 159 43 106 chr5 87341241 87341638 -115743894 - MLT1D LTR MaLR -6 499 128 1684 149 0 8 chr5 87341650 87341905 -115743627 - AluSx SINE Alu -4 308 56 474 95 0 0 chr5 87341907 87341970 -115743562 - MER66A LTR ERV1 -129 349 287 272 185 31 154 chr5 87341957 87342119 -115743413 - MLT1D LTR MaLR -477 149 8 * 906 129 8 0 chr5 87342293 87342425 -115743107 - AluSq/x SINE Alu -180 133 1 1314 157 37 0 chr5 87342431 87342647 -115742885 - AluJb SINE Alu -8 304 81 711 283 174 16 chr5 87342983 87343294 -115742238 - LTR16A LTR ERVL -90 360 1 357 244 42 124 chr5 87343923 87344140 -115741392 + L1ME1 LINE L1 5698 5896 -270 691 172 0 8 chr5 87344169 87344297 -115741235 + FLAM_C SINE Alu 1 127 -6 2005 103 0 8 chr5 87344414 87344676 -115740856 + AluSg SINE Alu 1 260 -50 420 91 0 0 chr5 87344676 87344731 -115740801 - Alu SINE Alu -256 56 2 24 0 0 0 chr5 87345002 87345026 -115740506 + AT_rich Low_complexity Low_complexity 1 24 0 1946 133 14 3 chr5 87345032 87345325 -115740207 + AluSx SINE Alu 6 301 -11 802 176 0 14 chr5 87345362 87345504 -115740028 + FLAM_C SINE Alu 4 143 0 2204 90 35 0 chr5 87345558 87345848 -115739684 + AluSp SINE Alu 1 300 -13 23 33 0 0 chr5 87345931 87345961 -115739571 + AT_rich Low_complexity Low_complexity 1 30 0 875 189 24 12 chr5 87346005 87346169 -115739363 - AluJo/FRAM SINE Alu 0 302 137 1449 133 0 18 chr5 87346172 87346341 -115739191 - AluSg/x SINE Alu -10 302 136 2593 59 0 0 chr5 87346341 87346646 -115738886 - AluY SINE Alu -6 305 1 1449 133 0 18 chr5 87346646 87346694 -115738838 - AluSg/x SINE Alu -176 136 89 773 170 14 7 chr5 87346701 87346842 -115738690 - FLAM_C SINE Alu 0 143 2 216 0 0 0 chr5 87346843 87346867 -115738665 + (TC)n Simple_repeat Simple_repeat 2 25 0 2259 95 3 0 chr5 87347226 87347511 -115738021 + AluSg SINE Alu 1 286 -24 1944 104 4 0 chr5 87347791 87348050 -115737482 + AluSx SINE Alu 44 303 -9 274 100 0 60 chr5 87348050 87348100 -115737432 + FAM SINE Alu 126 169 -10 1132 132 216 24 chr5 87348158 87348371 -115737161 - AluJb SINE Alu -58 254 1 863 162 56 28 chr5 87348443 87348622 -115736910 - LTR48B LTR ERV1 -3 641 458 723 130 0 0 chr5 87348635 87348743 -115736789 - FLAM_C SINE Alu -25 118 11 2008 113 48 20 chr5 87348823 87349116 -115736416 - AluSx SINE Alu -11 301 1 766 154 0 8 chr5 87349155 87349278 -115736254 - FLAM_C SINE Alu -11 122 1 447 185 348 45 chr5 87349331 87349427 -115736105 - LTR48 LTR ERV1 -354 268 202 2219 104 0 52 chr5 87349427 87349754 -115735778 - AluSq SINE Alu -3 310 1 2526 82 0 0 chr5 87349754 87350060 -115735472 - AluSx SINE Alu -6 306 1 447 185 348 45 chr5 87350060 87350213 -115735319 - LTR48 LTR ERV1 -419 203 9 588 297 41 12 chr5 87350282 87350567 -115734965 - L1ME3 LINE L1 -315 5806 5527 2053 108 0 0 chr5 87350644 87350904 -115734628 - AluSx SINE Alu -52 260 1 180 0 0 0 chr5 87351061 87351081 -115734451 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2012 136 4 4 chr5 87351085 87351365 -115734167 - AluSx SINE Alu -24 288 9 2053 83 0 11 chr5 87351365 87351641 -115733891 - AluY SINE Alu -38 273 1 1988 116 13 13 chr5 87352484 87352924 -115732608 - AluSg SINE Alu 0 440 1 935 217 49 79 chr5 87352967 87353271 -115732261 + MER97a DNA MER1_type? 363 657 -237 1902 114 54 44 chr5 87353659 87353956 -115731576 - AluSg SINE Alu -3 307 8 784 156 21 21 chr5 87353966 87354107 -115731425 - FLAM_C SINE Alu -1 142 2 724 170 0 37 chr5 87354177 87354312 -115731220 + FRAM SINE Alu 41 170 -6 418 256 75 15 chr5 87354315 87354448 -115731084 + MER97a DNA MER1_type? 782 894 0 1958 74 0 8 chr5 87354609 87354853 -115730679 + AluSg SINE Alu 1 242 -68 241 307 0 0 chr5 87355400 87355475 -115730057 + MIR SINE MIR 90 164 -98 485 243 101 14 chr5 87355480 87355628 -115729904 - MIR SINE MIR -12 250 90 2221 111 36 27 chr5 87355747 87356081 -115729451 - MER1B DNA MER1_type 0 337 1 867 174 39 11 chr5 87356089 87356267 -115729265 - MER5A DNA MER1_type 0 189 7 2360 54 0 44 chr5 87356696 87356876 -115728656 - AluY SINE Alu 0 311 149 2605 52 3 0 chr5 87356876 87357181 -115728351 - AluY SINE Alu -5 306 1 2360 54 0 44 chr5 87357181 87357323 -115728209 - AluY SINE Alu -162 149 2 1645 117 121 11 chr5 87357672 87357937 -115727595 + AluSg1 SINE Alu 1 294 -15 228 86 0 0 chr5 87357954 87357989 -115727543 + (T)n Simple_repeat Simple_repeat 1 35 0 2254 86 3 42 chr5 87358022 87358335 -115727197 + AluSx SINE Alu 1 301 -11 1030 121 72 24 chr5 87358971 87359137 -115726395 - AluSg/x SINE Alu -7 305 132 27 0 0 0 chr5 87359137 87359164 -115726368 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 87359198 87359226 -115726306 + AT_rich Low_complexity Low_complexity 1 28 0 2617 49 0 10 chr5 87359239 87359546 -115725986 + AluY SINE Alu 1 304 -7 261 0 0 0 chr5 87360521 87360550 -115724982 + (TG)n Simple_repeat Simple_repeat 2 30 0 858 165 0 0 chr5 87360836 87360969 -115724563 + AluJo SINE Alu 1 133 -179 1158 157 51 25 chr5 87360978 87361214 -115724318 - AluJo SINE Alu -8 304 63 581 134 226 110 chr5 87361216 87361380 -115724152 + AluJo SINE Alu 111 293 -19 376 311 0 0 chr5 87361380 87361486 -115724046 + MIR SINE MIR 155 260 -2 21 0 0 0 chr5 87362114 87362135 -115723397 + AT_rich Low_complexity Low_complexity 1 21 0 2310 107 3 0 chr5 87362138 87362438 -115723094 + AluSx SINE Alu 1 301 -11 457 248 44 0 chr5 87362438 87362551 -115722981 - AluJo/FLAM SINE Alu -184 118 1 25 0 0 0 chr5 87362591 87362616 -115722916 + AT_rich Low_complexity Low_complexity 1 25 0 1918 105 0 120 chr5 87362774 87362980 -115722552 - AluSx SINE Alu 0 302 152 2851 19 0 0 chr5 87362980 87363291 -115722241 - AluYa5 SINE Alu 0 311 1 1918 105 0 120 chr5 87363291 87363426 -115722106 - AluSx SINE Alu -150 152 2 320 356 20 0 chr5 87363452 87363598 -115721934 - MIR3 SINE MIR -16 192 44 198 179 30 60 chr5 87363731 87363798 -115721734 + MIR SINE MIR 75 139 -123 2212 133 0 9 chr5 87364164 87364480 -115721052 - AluSq SINE Alu 0 313 1 2224 115 3 7 chr5 87364485 87364790 -115720742 - AluSg SINE Alu -6 304 1 412 107 0 0 chr5 87364795 87364851 -115720681 - Alu SINE Alu -21 288 233 2115 114 0 29 chr5 87365359 87365665 -115719867 - AluSx SINE Alu -15 297 1 1324 159 22 22 chr5 87365693 87365925 -115719607 - AluSx SINE Alu -22 290 59 216 205 12 36 chr5 87366189 87366272 -115719260 + (TTTA)n Simple_repeat Simple_repeat 3 83 0 180 0 0 0 chr5 87366412 87366432 -115719100 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 87366709 87366733 -115718799 + AT_rich Low_complexity Low_complexity 1 24 0 2185 114 0 7 chr5 87367279 87367568 -115717964 - AluSx SINE Alu -25 287 1 590 195 115 0 chr5 87367712 87367825 -115717707 - FLAM_C SINE Alu -6 127 2 1466 156 19 0 chr5 87369412 87369668 -115715864 - L1PA14 LINE L1 -2 6159 5899 1068 24 0 0 chr5 87369668 87369795 -115715737 + (TTCCC)n Simple_repeat Simple_repeat 4 130 0 1384 277 130 13 chr5 87369910 87370498 -115715034 + HERV16 LTR ERVL 2253 2919 -2077 2157 113 0 3 chr5 87370871 87371186 -115714346 + AluSp SINE Alu 6 313 0 1560 169 17 24 chr5 87371326 87371616 -115713916 + AluJo SINE Alu 22 309 -3 387 319 214 30 chr5 87371792 87371995 -115713537 + LTR16A LTR ERVL 1 165 -285 2431 92 3 0 chr5 87371995 87372301 -115713231 - AluSp SINE Alu -6 307 1 387 319 214 30 chr5 87372301 87372412 -115713120 + LTR16A LTR ERVL 165 254 -196 2252 111 3 0 chr5 87372412 87372710 -115712822 - AluSx SINE Alu -12 300 2 387 319 214 30 chr5 87372710 87372767 -115712765 + LTR16A LTR ERVL 254 442 -8 21 0 0 0 chr5 87373447 87373468 -115712064 + AT_rich Low_complexity Low_complexity 1 21 0 2077 123 3 13 chr5 87373508 87373810 -115711722 - AluSx SINE Alu -13 299 1 1618 172 49 18 chr5 87373812 87373976 -115711556 - AluJo SINE Alu -18 294 116 2346 93 10 0 chr5 87373976 87374286 -115711246 - AluSp SINE Alu 0 313 1 1618 172 49 18 chr5 87374286 87374406 -115711126 - AluJo SINE Alu -196 116 1 2344 81 7 7 chr5 87374426 87374721 -115710811 - AluSq SINE Alu -16 297 3 25 0 0 0 chr5 87374723 87374748 -115710784 + AT_rich Low_complexity Low_complexity 1 25 0 2269 98 17 0 chr5 87374949 87375246 -115710286 - AluSx SINE Alu -10 302 1 2272 103 0 0 chr5 87375393 87375685 -115709847 + AluSx SINE Alu 1 292 -20 38 22 0 0 chr5 87376719 87376764 -115708768 + GC_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr5 87377032 87377058 -115708474 + GC_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 87377291 87377314 -115708218 + GC_rich Low_complexity Low_complexity 1 23 0 2191 69 3 57 chr5 87379337 87379654 -115705878 - AluSc SINE Alu -9 300 1 2554 54 3 16 chr5 87380216 87380530 -115705002 + AluY SINE Alu 1 310 -1 2420 92 0 0 chr5 87380702 87381005 -115704527 - AluSg SINE Alu -7 303 1 1908 137 7 0 chr5 87381021 87381299 -115704233 - AluSx SINE Alu -31 281 2 261 95 0 0 chr5 87381409 87381451 -115704081 + MER117 DNA MER1_type 109 150 -47 437 127 0 0 chr5 87382334 87382405 -115703127 - Tigger1 DNA MER2_type -60 2358 2288 281 344 23 16 chr5 87383216 87383344 -115702188 - MIR SINE MIR -63 145 17 953 185 0 0 chr5 87383475 87383632 -115701900 - AluSg/x SINE Alu -12 300 144 2362 103 7 0 chr5 87384682 87384992 -115700540 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 87385730 87385752 -115699780 + AT_rich Low_complexity Low_complexity 1 22 0 2089 145 3 0 chr5 87386320 87386616 -115698916 - AluSx SINE Alu -15 297 1 194 254 30 15 chr5 87387048 87387115 -115698417 - MIR SINE MIR -5 257 190 1527 187 0 31 chr5 87587312 87587606 -115497926 - AluJo SINE Alu -27 285 1 886 159 0 0 chr5 87587733 87587865 -115497667 - FLAM_C SINE Alu -11 132 1 502 312 77 9 chr5 87588399 87588620 -115496912 + MIR SINE MIR 27 262 0 195 42 0 0 chr5 87589188 87589212 -115496320 + (T)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr5 87589764 87589789 -115495743 + AT_rich Low_complexity Low_complexity 1 25 0 1005 178 0 0 chr5 87589790 87589947 -115495585 - AluJb SINE Alu -27 285 129 1982 127 76 39 chr5 87589950 87590305 -115495227 - L1MA2 LINE L1 -2 6302 5935 2372 93 6 3 chr5 87590307 87590619 -115494913 - AluSp SINE Alu 0 313 1 3870 157 87 28 chr5 87590620 87591843 -115493689 - L1 LINE L1 -3106 4459 3145 2174 107 7 0 chr5 87591843 87592133 -115493399 - AluY SINE Alu -19 292 1 3870 157 87 28 chr5 87592133 87592248 -115493284 - L1 LINE L1 -4420 3145 3038 1076 190 138 0 chr5 87592248 87592480 -115493052 - AluJb SINE Alu -18 294 31 2013 110 3 42 chr5 87592488 87592797 -115492735 - AluSg SINE Alu -9 301 5 11967 126 51 30 chr5 87592806 87593673 -115491859 - L1 LINE L1 -4522 3043 2196 1905 108 82 0 chr5 87593673 87593952 -115491580 - AluSq SINE Alu -11 302 1 11967 126 51 30 chr5 87593952 87595078 -115490454 - L1 LINE L1 -5369 2196 1008 643 219 34 0 chr5 87595140 87595259 -115490273 - FLAM_C SINE Alu -10 123 1 561 193 117 41 chr5 87595335 87595480 -115490052 - FRAM SINE Alu -20 156 1 1114 110 0 26 chr5 87595595 87595794 -115489738 - AluSg/x SINE Alu 0 326 132 1635 201 7 3 chr5 87595875 87596173 -115489359 + AluJb SINE Alu 1 299 -13 2179 122 0 0 chr5 87596323 87596617 -115488915 - AluSq SINE Alu -19 294 1 277 97 177 0 chr5 87596860 87596914 -115488618 - AluJb SINE Alu 0 302 238 7264 164 60 71 chr5 87596914 87598485 -115487047 - MER52A LTR ERV1 0 1755 202 292 217 17 0 chr5 87598926 87598986 -115486546 - MER52A LTR ERV1 -1692 63 3 1494 157 0 39 chr5 87598987 87599242 -115486290 - AluJb SINE Alu -67 245 1 1691 147 51 13 chr5 87599586 87599898 -115485634 + MER4A LTR ERV1 1 324 -340 1082 145 0 75 chr5 87599919 87600119 -115485413 + AluJb SINE Alu 110 294 -18 432 113 289 31 chr5 87600201 87600298 -115485234 + MER4C LTR ERV1 294 415 -50 1337 106 0 0 chr5 87600305 87600475 -115485057 - AluSx SINE Alu -142 170 1 397 231 28 9 chr5 87601813 87601921 -115483611 - LTR23 LTR ERV1 -5 432 323 1521 167 60 4 chr5 87601940 87602221 -115483311 - AluJb SINE Alu -7 305 9 1188 165 143 81 chr5 87602236 87602352 -115483180 - AluJb SINE Alu -11 291 184 2183 95 39 0 chr5 87602352 87602637 -115482895 - AluSq SINE Alu -17 296 1 1724 188 3 3 chr5 87602637 87602935 -115482597 - AluJb SINE Alu -14 298 1 1188 165 143 81 chr5 87602935 87603090 -115482442 - AluJb SINE Alu -117 185 2 189 0 0 0 chr5 87603446 87603467 -115482065 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 2105 81 7 34 chr5 87603477 87603772 -115481760 - AluY SINE Alu -24 287 1 440 245 147 5 chr5 87603915 87604076 -115481456 - MER5A DNA MER1_type 0 189 4 2263 92 13 7 chr5 87604326 87604629 -115480903 - AluSq SINE Alu -8 305 1 443 261 33 39 chr5 87604743 87604896 -115480636 + L2 LINE L2 3162 3313 0 1543 146 56 0 chr5 87605004 87605272 -115480260 - L1MA4 LINE L1 -5 6295 6013 2059 160 33 122 chr5 87605541 87606140 -115479392 - L1MC2 LINE L1 -1 6841 6296 794 179 0 0 chr5 87606140 87606263 -115479269 - FLAM_C SINE Alu -16 127 5 3036 237 137 39 chr5 87606267 87606516 -115479016 - L1MC2 LINE L1 -749 5895 5672 1427 188 29 11 chr5 87606516 87606792 -115478740 + AluJo SINE Alu 1 281 -31 3036 237 137 39 chr5 87606792 87607021 -115478511 - L1MC2 LINE L1 -972 5672 5467 2294 60 0 11 chr5 87607021 87607338 -115478194 - AluSc SINE Alu 0 316 3 3036 237 137 39 chr5 87607338 87608273 -115477259 - L1MC2 LINE L1 -1177 5467 4729 1655 174 19 22 chr5 87608273 87608584 -115476948 - AluJo SINE Alu -2 310 1 3036 237 137 39 chr5 87608584 87608807 -115476725 - L1MC2 LINE L1 -1915 4729 4529 23 33 0 0 chr5 87608811 87608841 -115476691 + AT_rich Low_complexity Low_complexity 1 30 0 320 194 37 0 chr5 87608841 87609283 -115476249 + (TA)n Simple_repeat Simple_repeat 1 458 0 2021 227 62 21 chr5 87609295 87609629 -115475903 - L1MC2 LINE L1 -2096 4548 4229 1229 184 165 31 chr5 87609629 87609884 -115475648 - AluJb SINE Alu -13 289 1 2021 227 62 21 chr5 87609884 87610165 -115475367 - L1MC2 LINE L1 -2415 4229 3908 1453 248 101 52 chr5 87610215 87610378 -115475154 - L1MC2 LINE L1 -3589 3055 2901 2119 124 0 13 chr5 87610378 87610685 -115474847 + AluSx SINE Alu 1 303 -9 1453 248 101 52 chr5 87610685 87611197 -115474335 - L1MC2 LINE L1 -3743 2901 2416 1779 168 0 14 chr5 87611197 87611488 -115474044 - AluJo SINE Alu -25 287 1 1453 248 101 52 chr5 87611488 87612194 -115473338 - L1MC2 LINE L1 -4228 2416 1516 761 209 0 0 chr5 87612205 87612320 -115473212 + FLAM_C SINE Alu 2 116 -27 1794 233 107 86 chr5 87612334 87612372 -115473160 - L1MC2 LINE L1 -5013 1621 1585 2395 88 3 0 chr5 87612372 87612680 -115472852 - AluY SINE Alu -1 310 2 1794 233 107 86 chr5 87612680 87612949 -115472583 - L1MC2 LINE L1 -5049 1585 1323 1977 133 13 7 chr5 87612949 87613258 -115472274 - AluSx SINE Alu -1 311 1 1794 233 107 86 chr5 87613258 87613709 -115471823 - L1MC2 LINE L1 -5311 1323 833 2392 69 0 13 chr5 87613709 87614012 -115471520 - AluY SINE Alu -11 300 2 1794 233 107 86 chr5 87614012 87614259 -115471273 - L1MC2 LINE L1 -5801 833 593 2064 125 0 3 chr5 87614685 87614972 -115470560 - AluSx SINE Alu -26 286 1 1357 185 19 89 chr5 87614980 87615172 -115470360 - AluJo SINE Alu 0 302 141 2151 102 3 0 chr5 87615172 87615457 -115470075 - AluSc SINE Alu -23 286 1 1357 185 19 89 chr5 87615457 87615589 -115469943 - AluJo SINE Alu -161 141 1 32 26 0 0 chr5 87615595 87615634 -115469898 + AT_rich Low_complexity Low_complexity 1 39 0 36 0 0 0 chr5 87615678 87615714 -115469818 + AT_rich Low_complexity Low_complexity 1 36 0 233 275 200 0 chr5 87615718 87615798 -115469734 + L2 LINE L2 3137 3232 -40 2032 130 0 37 chr5 87615897 87616220 -115469312 + AluJb SINE Alu 1 311 -1 317 283 39 100 chr5 87616677 87616857 -115468675 - MER5B DNA MER1_type -3 175 7 1499 166 36 71 chr5 87617022 87617330 -115468202 + AluJb SINE Alu 1 297 -15 935 126 0 15 chr5 87617348 87617483 -115468049 - FLAM_C SINE Alu 0 133 1 2176 114 10 0 chr5 87617607 87617896 -115467636 + AluSx SINE Alu 1 292 -20 1371 190 36 14 chr5 87618386 87618694 -115466838 - AluJo SINE Alu 0 314 1 377 256 64 103 chr5 87619222 87619425 -115466107 - MIR SINE MIR -54 208 14 2548 71 0 0 chr5 87619588 87619896 -115465636 - AluY SINE Alu -3 308 1 481 152 107 18 chr5 87619903 87620015 -115465517 - Tigger3(Golem) DNA MER2_type -630 2399 2278 * 507 234 0 36 chr5 87620006 87620117 -115465415 - Tigger3(Golem) DNA MER2_type -2921 108 2 439 226 78 0 chr5 87620117 87620232 -115465300 + L1ME1 LINE L1 5791 5914 -250 526 272 25 0 chr5 87620234 87620396 -115465136 + L1ME1 LINE L1 5997 6162 -4 495 284 60 49 chr5 87620410 87620476 -115465056 + L1ME2 LINE L1 5868 5932 -232 2297 104 0 7 chr5 87620476 87620783 -115464749 + AluY SINE Alu 1 305 -6 495 284 60 49 chr5 87620783 87621001 -115464531 + L1ME2 LINE L1 5932 6155 -9 239 190 90 70 chr5 87621530 87621562 -115463970 - LTR50 LTR ERVL -23 772 742 1980 93 36 7 chr5 87621562 87621841 -115463691 - AluSp SINE Alu -26 287 1 239 190 90 70 chr5 87621841 87621908 -115463624 - LTR50 LTR ERVL -53 742 671 1040 203 11 5 chr5 87622167 87622354 -115463178 + MER5A DNA MER1_type 1 188 -1 207 125 0 0 chr5 87622601 87622641 -115462891 + (T)n Simple_repeat Simple_repeat 1 40 0 353 314 157 38 chr5 87623845 87624004 -115461528 - MER91A DNA MER1_type -5 191 14 2092 118 10 7 chr5 87624911 87625207 -115460325 + AluSx SINE Alu 1 297 -15 1139 214 214 39 chr5 87625331 87625920 -115459612 - LTR50 LTR ERVL 0 795 20 958 196 6 12 chr5 87626052 87626225 -115459307 + FAM SINE Alu 1 172 -3 219 36 0 0 chr5 87627254 87627282 -115458250 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 458 161 0 12 chr5 87627287 87627368 -115458164 - FLAM SINE Alu -10 133 54 535 162 36 18 chr5 87627368 87627479 -115458053 - MER4C LTR ERV1 -352 113 1 2250 110 3 0 chr5 87627505 87627806 -115457726 + AluSq SINE Alu 1 302 -11 397 206 69 30 chr5 87628889 87629020 -115456512 - L1ME4a LINE L1 -55 6066 5931 2525 67 0 0 chr5 87629258 87629558 -115455974 + AluSg1 SINE Alu 1 300 -9 1283 166 102 56 chr5 87630880 87631164 -115454368 - AluJo SINE Alu -5 297 1 32 0 0 0 chr5 87631733 87631765 -115453767 + AT_rich Low_complexity Low_complexity 1 32 0 29 47 0 0 chr5 87631938 87631981 -115453551 + AT_rich Low_complexity Low_complexity 1 43 0 676 203 0 8 chr5 87631992 87632110 -115453422 - FLAM_C SINE Alu -15 118 2 2121 95 3 14 chr5 87632674 87632957 -115452575 + AluSx SINE Alu 1 280 -32 236 75 0 25 chr5 87632957 87632997 -115452535 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 2186 124 0 3 chr5 87633127 87633426 -115452106 + AluSq SINE Alu 1 298 -15 366 300 182 9 chr5 87633667 87633700 -115451832 + MIR SINE MIR 5 31 -231 916 209 112 0 chr5 87633700 87633887 -115451645 + MER3 DNA MER1_type 1 208 -1 366 300 182 9 chr5 87633887 87634073 -115451459 + MIR SINE MIR 31 262 0 205 292 0 14 chr5 87634500 87634572 -115450960 - MIR SINE MIR -24 238 168 396 213 11 21 chr5 87634581 87634675 -115450857 - MER46C DNA MER2_type -1 337 245 229 264 49 80 chr5 87634702 87634865 -115450667 - MER46C DNA MER2_type -165 173 16 785 224 7 7 chr5 87635053 87635200 -115450332 - FRAM SINE Alu -31 145 1 202 282 169 0 chr5 87635228 87635299 -115450233 + L2 LINE L2 3229 3311 -2 253 318 23 11 chr5 87635643 87635731 -115449801 + MIR SINE MIR 16 104 -104 24 32 0 0 chr5 87638530 87638561 -115446971 + AT_rich Low_complexity Low_complexity 1 31 0 400 223 274 41 chr5 87639007 87639204 -115446328 - MIR SINE MIR -8 254 12 2458 64 17 3 chr5 87640357 87640655 -115444877 + AluSq SINE Alu 1 302 -11 480 299 194 31 chr5 87640883 87641171 -115444361 - L2 LINE L2 -38 3234 2900 356 334 84 61 chr5 87641267 87641707 -115443825 - L2 LINE L2 -577 2737 2288 890 117 55 0 chr5 87641787 87641915 -115443617 - FLAM_C SINE Alu -8 135 1 725 242 164 15 chr5 87643134 87643403 -115442129 + MER46C DNA MER2_type 30 338 0 222 398 8 0 chr5 87643403 87643521 -115442011 - MIR SINE MIR -114 148 30 2119 110 14 10 chr5 87643722 87644014 -115441518 + AluSx SINE Alu 1 293 -19 768 189 0 8 chr5 87644464 87644591 -115440941 + FLAM_C SINE Alu 1 126 -17 335 181 169 0 chr5 87645140 87645223 -115440309 - L1MC1 LINE L1 -24 6309 6213 4644 193 76 61 chr5 87645223 87646044 -115439488 - L1MC1 LINE L1 -68 6265 5458 564 241 71 0 chr5 87646044 87646156 -115439376 - FLAM_A SINE Alu -13 120 1 4644 193 76 61 chr5 87646156 87646295 -115439237 - L1MC1 LINE L1 -875 5458 5323 2099 119 24 0 chr5 87646295 87646589 -115438943 - AluSx SINE Alu -11 301 1 4644 193 76 61 chr5 87646589 87647899 -115437633 - L1MC1 LINE L1 -1010 5323 3952 2071 125 16 0 chr5 87648610 87648913 -115436619 - AluSx SINE Alu -4 308 1 830 166 108 0 chr5 87649418 87649557 -115435975 + AluJb SINE Alu 8 161 -151 948 134 0 15 chr5 87649703 87649837 -115435695 - FLAM_C SINE Alu 0 133 2 2262 113 0 0 chr5 87650367 87650669 -115434863 - AluSx SINE Alu -10 302 1 1741 162 32 0 chr5 87651709 87651993 -115433539 + AluJb SINE Alu 12 304 -8 2348 84 0 0 chr5 87652424 87652711 -115432821 - AluSx SINE Alu -25 287 1 186 160 0 0 chr5 87653169 87653219 -115432313 + (CCA)n Simple_repeat Simple_repeat 2 51 0 21 36 0 0 chr5 87654158 87654186 -115431346 + AT_rich Low_complexity Low_complexity 1 28 0 2311 100 23 0 chr5 87655176 87655475 -115430057 + AluSx SINE Alu 1 306 -6 737 195 8 0 chr5 87655481 87655604 -115429928 + FLAM_A SINE Alu 2 125 -8 1079 145 88 10 chr5 87656252 87656445 -115429087 - AluJo SINE Alu -13 299 92 1850 133 7 43 chr5 87656567 87656867 -115428665 - AluSx SINE Alu -23 289 1 360 208 149 26 chr5 87656887 87657041 -115428491 + Charlie5 DNA MER1_type 2335 2507 -105 189 0 0 0 chr5 87657294 87657315 -115428217 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 384 22 0 0 chr5 87657314 87657359 -115428173 + (GA)n Simple_repeat Simple_repeat 2 46 0 2079 127 6 16 chr5 87658116 87658432 -115427100 - AluSq SINE Alu 0 313 1 1141 133 6 17 chr5 87658665 87658846 -115426686 + AluJb SINE Alu 17 195 -117 1661 109 120 11 chr5 87658896 87659163 -115426369 - AluSx SINE Alu -16 296 1 947 209 47 24 chr5 87659199 87659452 -115426080 - Charlie5 DNA MER1_type 0 2617 2359 624 190 151 11 chr5 87659453 87659632 -115425900 - Charlie5 DNA MER1_type -2408 204 1 1062 161 0 6 chr5 87661642 87661804 -115423728 - AluJo SINE Alu -151 161 1 2331 101 0 3 chr5 87666654 87666960 -115418572 + AluSx SINE Alu 1 305 -7 689 306 160 39 chr5 87667725 87668451 -115417081 + L2 LINE L2 2164 2977 -337 1647 180 41 68 chr5 87668467 87668861 -115416671 + MLT1B LTR MaLR 8 390 0 486 282 24 28 chr5 87669178 87669391 -115416141 + L1ME3A LINE L1 4062 4273 -1873 31 44 0 0 chr5 87669409 87669454 -115416078 + AT_rich Low_complexity Low_complexity 1 45 0 2165 117 0 0 chr5 87669461 87669763 -115415769 + AluSx SINE Alu 1 302 0 1645 243 113 35 chr5 87669807 87670436 -115415096 + L1ME3A LINE L1 5283 5960 -202 341 295 14 78 chr5 87670497 87670617 -115414915 + L1ME3A LINE L1 5963 6065 -105 2100 90 4 4 chr5 87670617 87670928 -115414604 - AluSg SINE Alu 0 311 1 341 295 14 78 chr5 87670928 87671023 -115414509 + L1ME3A LINE L1 6065 6165 -5 591 184 219 70 chr5 87671399 87671568 -115413964 + MIR SINE MIR 1 214 -48 2441 78 3 0 chr5 87671568 87671876 -115413656 + AluSg SINE Alu 1 309 -1 591 184 219 70 chr5 87671876 87671934 -115413598 + MIR SINE MIR 214 262 0 808 117 31 31 chr5 87672274 87672402 -115413130 + FLAM_C SINE Alu 11 138 -5 984 289 117 62 chr5 87672606 87673579 -115411953 + HAL1 LINE L1 275 1301 -1206 317 259 78 48 chr5 87673660 87673826 -115411706 - L2 LINE L2 -1360 1954 1784 2511 45 0 0 chr5 87673884 87674176 -115411356 - AluY SINE Alu -19 292 1 825 103 0 17 chr5 87674182 87674299 -115411233 - AluSp/q SINE Alu -5 308 194 35328 64 7 8 chr5 87674309 87679667 -115405865 - L1PA6 LINE L1 -2 6152 802 255 157 0 0 chr5 87679790 87679841 -115405691 + (TA)n Simple_repeat Simple_repeat 1 51 0 1865 143 7 20 chr5 87679841 87680006 -115405526 - AluSx SINE Alu -12 300 139 2189 120 3 0 chr5 87680006 87680306 -115405226 - AluSq SINE Alu -12 301 1 1865 143 7 20 chr5 87680306 87680441 -115405091 - AluSx SINE Alu -173 139 4 1796 152 76 0 chr5 87680473 87680763 -115404769 + AluJo SINE Alu 1 312 0 2253 104 0 3 chr5 87681051 87681348 -115404184 - AluSg SINE Alu -14 296 1 493 194 40 40 chr5 87682675 87682799 -115402733 + MIR3 SINE MIR 82 205 -3 2423 63 10 13 chr5 87683204 87683507 -115402025 + AluY SINE Alu 1 302 -9 2058 228 85 11 chr5 87683647 87684174 -115401358 - L1ME1 LINE L1 -5 6161 5596 247 299 28 56 chr5 87684302 87684409 -115401123 - MIR3 SINE MIR -16 192 89 1796 160 28 3 chr5 87684422 87684704 -115400828 + AluJb SINE Alu 1 289 -23 2006 157 0 0 chr5 87684715 87685093 -115400439 + AluSx SINE Alu 6 383 0 2277 74 14 7 chr5 87685660 87685957 -115399575 + AluSp SINE Alu 1 299 -14 2147 123 7 0 chr5 87686503 87686811 -115398721 - AluSx SINE Alu -2 310 1 2255 139 24 59 chr5 87688408 87688869 -115396663 - MER65A LTR ERV1 0 445 1 1164 263 32 6 chr5 87688939 87689277 -115396255 - MER65A-int LTR ERV1 -2 4869 4523 1032 151 0 0 chr5 87689288 87689434 -115396098 - AluSg/x SINE Alu -22 290 145 545 198 40 64 chr5 87689476 87689525 -115396007 - MER65A-int LTR ERV1 -2866 3732 3683 1755 176 11 0 chr5 87689525 87689828 -115395704 + AluJb SINE Alu 1 306 0 545 198 40 64 chr5 87689828 87689979 -115395553 - MER65A-int LTR ERV1 -2915 3683 3536 1249 195 0 9 chr5 87690325 87690551 -115394981 + AluJb SINE Alu 83 306 -6 2453 76 0 3 chr5 87690560 87690861 -115394671 + AluY SINE Alu 1 300 -11 638 153 81 103 chr5 87690863 87690902 -115394630 - MER65A-int LTR ERV1 -2598 3394 3356 2357 102 0 0 chr5 87690902 87691207 -115394325 - AluSc SINE Alu -4 305 1 638 153 81 103 chr5 87691207 87691442 -115394090 - MER65A-int LTR ERV1 -2636 3356 2364 525 194 83 0 chr5 87691443 87691551 -115393981 + FLAM_C SINE Alu 1 117 -26 284 25 50 0 chr5 87691552 87691592 -115393940 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 6869 190 81 78 chr5 87691592 87691665 -115393867 - MER65A-int LTR ERV1 -2377 2494 2423 2225 128 0 3 chr5 87691665 87691978 -115393554 - AluSx SINE Alu 0 312 1 1875 156 0 7 chr5 87691981 87692263 -115393269 - AluJo SINE Alu -24 288 9 6869 190 81 78 chr5 87692263 87692544 -115392988 - MER65A-int LTR ERV1 -2449 2422 2143 2338 94 0 3 chr5 87692544 87692852 -115392680 - AluSg SINE Alu -3 307 1 6869 190 81 78 chr5 87692852 87693488 -115392044 - MER65A-int LTR ERV1 -2728 2143 1510 2309 112 0 3 chr5 87693488 87693793 -115391739 - AluSx SINE Alu -8 304 1 6869 190 81 78 chr5 87693793 87693986 -115391546 - MER65A-int LTR ERV1 -3361 1510 1319 2311 90 17 0 chr5 87693986 87694287 -115391245 + AluSp SINE Alu 2 307 -6 6869 190 81 78 chr5 87694287 87694564 -115390968 - MER65A-int LTR ERV1 -3552 1319 1044 2071 133 0 33 chr5 87694564 87694865 -115390667 - AluSx SINE Alu -21 291 1 6869 190 81 78 chr5 87694865 87695105 -115390427 - MER65A-int LTR ERV1 -3827 1044 806 2345 114 0 0 chr5 87695105 87695412 -115390120 - AluSg SINE Alu -3 307 1 6869 190 81 78 chr5 87695412 87695585 -115389947 - MER65A-int LTR ERV1 -4065 806 635 1804 164 9 47 chr5 87695585 87695902 -115389630 - AluJo SINE Alu -7 305 1 6869 190 81 78 chr5 87695902 87696620 -115388912 - MER65A-int LTR ERV1 -4236 635 -80 2147 128 0 3 chr5 87696620 87696918 -115388614 - AluSx SINE Alu -15 297 1 6869 190 81 78 chr5 87696918 87696929 -115388603 - MER65A-int LTR ERV1 -4951 4294967216 231 1894 143 31 0 chr5 87696929 87697223 -115388309 - AluJb SINE Alu -9 303 1 6869 190 81 78 chr5 87697223 87697387 -115388145 - MER65A-int LTR ERV1 -4639 232 70 2405 126 35 60 chr5 87697458 87697510 -115388022 - MER65A LTR ERV1 0 445 393 207 0 0 0 chr5 87697510 87697533 -115387999 + (TA)n Simple_repeat Simple_repeat 2 24 0 2405 126 35 60 chr5 87697533 87697878 -115387654 - MER65A LTR ERV1 -52 393 41 2205 129 3 0 chr5 87697878 87698189 -115387343 - AluSx SINE Alu 0 312 1 1702 168 20 24 chr5 87698191 87698489 -115387043 - AluJo SINE Alu -15 297 1 2405 126 35 60 chr5 87698489 87698541 -115386991 - MER65A LTR ERV1 -405 40 3 1834 148 31 14 chr5 87699181 87699471 -115386061 - AluJb SINE Alu -17 295 1 2325 90 10 7 chr5 87700080 87700420 -115385112 + AluSx SINE Alu 1 341 0 273 309 252 4 chr5 87700527 87700757 -115384775 + L2 LINE L2 2067 2353 -961 2369 80 7 0 chr5 87701056 87701355 -115384177 - AluSq SINE Alu -12 301 1 898 153 0 0 chr5 87702227 87702351 -115383181 - FLAM_C SINE Alu -19 124 1 2136 129 10 0 chr5 87702361 87702656 -115382876 - AluSx SINE Alu -14 298 1 257 331 24 47 chr5 87702663 87702790 -115382742 + L2 LINE L2 2657 2780 -534 423 344 119 35 chr5 87702889 87703174 -115382358 + L2 LINE L2 2955 3263 -9 2224 112 0 0 chr5 87703454 87703775 -115381757 + AluSx SINE Alu 1 321 0 192 322 34 0 chr5 87703816 87703875 -115381657 - L2 LINE L2 -3 3269 3209 367 288 22 108 chr5 87704101 87704424 -115381108 + L1ME4a LINE L1 5751 6045 -76 436 304 120 0 chr5 87704657 87704815 -115380717 + MIR SINE MIR 9 185 -77 493 322 160 46 chr5 87706126 87706534 -115378998 + L2 LINE L2 2167 2527 -745 2170 105 3 16 chr5 87706534 87706840 -115378692 - AluSx SINE Alu -10 302 1 493 322 160 46 chr5 87706840 87707396 -115378136 + L2 LINE L2 2527 3257 -15 2900 147 23 48 chr5 87707544 87708162 -115377370 + L1MB4 LINE L1 5579 6180 0 2219 121 3 0 chr5 87708183 87708489 -115377043 + AluSq SINE Alu 1 307 -6 195 42 0 0 chr5 87708499 87708523 -115377009 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2503 67 0 0 chr5 87708640 87708939 -115376593 + AluY SINE Alu 1 299 -12 244 255 0 0 chr5 87709557 87709604 -115375928 + L2 LINE L2 3216 3262 -10 1616 118 13 13 chr5 87709964 87710201 -115375331 + AluSq SINE Alu 68 304 -9 262 30 0 0 chr5 87710509 87710542 -115374990 - U2 snRNA snRNA -152 36 4 212 122 0 49 chr5 87711840 87711881 -115373651 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 24 53 0 0 chr5 87712516 87712554 -115372978 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 87714454 87714475 -115371057 + AT_rich Low_complexity Low_complexity 1 21 0 203 311 122 0 chr5 87714966 87715040 -115370492 - L2 LINE L2 -7 3265 3183 2291 112 0 0 chr5 87715504 87715816 -115369716 - AluSx SINE Alu 0 312 1 1933 107 35 21 chr5 87716508 87716797 -115368735 + AluSx SINE Alu 14 306 -6 300 250 54 54 chr5 87717632 87717724 -115367808 - L1MC4 LINE L1 -1339 6703 6612 307 66 67 0 chr5 87717724 87717844 -115367688 + (TA)n Simple_repeat Simple_repeat 1 128 0 21 0 0 0 chr5 87717856 87717877 -115367655 + AT_rich Low_complexity Low_complexity 1 21 0 605 96 34 22 chr5 87717877 87718055 -115367477 + (TA)n Simple_repeat Simple_repeat 1 180 0 935 98 0 15 chr5 87718162 87718295 -115367237 - FLAM_C SINE Alu -12 131 1 12214 193 61 10 chr5 87718479 87720153 -115365379 + L1MA4A LINE L1 2 1588 -5260 2056 144 3 3 chr5 87720153 87720459 -115365073 + AluSx SINE Alu 1 306 -6 12214 193 61 10 chr5 87720459 87721937 -115363595 + L1MA4A LINE L1 1588 2988 -3860 2338 98 0 0 chr5 87721937 87722234 -115363298 - AluSg SINE Alu -13 297 1 12214 193 61 10 chr5 87722234 87723616 -115361916 + L1MA4A LINE L1 2988 4774 -2074 4970 144 21 51 chr5 87723623 87724109 -115361423 + L1MA4A LINE L1 5659 6158 -847 2131 143 0 3 chr5 87724109 87724417 -115361115 + AluSx SINE Alu 1 307 -5 4970 144 21 51 chr5 87724417 87725315 -115360217 + L1MA4A LINE L1 6158 7003 -2 548 171 12 41 chr5 87725452 87725622 -115359910 + CT-rich Low_complexity Low_complexity 4 168 0 262 86 0 0 chr5 87725622 87725657 -115359875 + (TC)n Simple_repeat Simple_repeat 1 35 0 1529 177 34 11 chr5 87725690 87725956 -115359576 - AluJo SINE Alu -18 294 23 322 268 0 54 chr5 87726206 87726318 -115359214 - L2 LINE L2 -50 3263 3158 25 65 0 0 chr5 87727292 87727338 -115358194 + AT_rich Low_complexity Low_complexity 1 46 0 352 293 82 66 chr5 87727476 87727956 -115357576 + HAL1b LINE L1 219 713 -635 1034 203 39 103 chr5 87727956 87728346 -115357186 + MLT1A1 LTR MaLR 1 365 0 352 293 82 66 chr5 87728346 87728473 -115357059 + HAL1b LINE L1 713 836 -512 1788 173 0 0 chr5 87728553 87728863 -115356669 + AluJb SINE Alu 1 310 0 654 343 38 34 chr5 87729186 87729629 -115355903 + L1M4 LINE L1 2693 3137 -3009 1842 158 34 3 chr5 87729681 87729979 -115355553 - AluJb SINE Alu -5 307 1 2380 85 10 7 chr5 87730012 87730319 -115355213 + AluY SINE Alu 1 308 -3 5160 131 40 17 chr5 87730444 87731398 -115354134 + Tigger3b DNA MER2_type 14 989 -242 370 91 0 78 chr5 87731399 87731476 -115354056 + Tigger3b DNA MER2_type 958 1028 -203 362 147 15 0 chr5 87731476 87731544 -115353988 + GA-rich Low_complexity Low_complexity 1 69 0 603 172 23 8 chr5 87731545 87731673 -115353859 + L1MC4 LINE L1 7913 8042 0 437 48 16 0 chr5 87731678 87731740 -115353792 + L1PB1 LINE L1 6087 6149 -2 355 311 101 58 chr5 87731752 87732029 -115353503 - L2 LINE L2 -136 3177 2889 474 245 65 11 chr5 87732207 87732391 -115353141 + L1ME LINE L1 5621 5814 -307 1492 168 61 32 chr5 87733139 87733419 -115352113 - AluJo SINE Alu -24 288 1 391 323 172 5 chr5 87733589 87733781 -115351751 + MIR SINE MIR 21 244 -18 731 200 211 0 chr5 87733868 87734048 -115351484 - MER20 DNA MER1_type 0 219 2 475 232 211 0 chr5 87734320 87734462 -115351070 + MIR SINE MIR 91 262 0 216 0 0 0 chr5 87734845 87734869 -115350663 + (TAA)n Simple_repeat Simple_repeat 2 25 0 830 232 18 0 chr5 87734924 87735092 -115350440 - AluJb SINE Alu -2 310 140 24 0 0 0 chr5 87736282 87736306 -115349226 + AT_rich Low_complexity Low_complexity 1 24 0 282 56 0 0 chr5 87736858 87736894 -115348638 + (CA)n Simple_repeat Simple_repeat 2 37 0 232 295 51 13 chr5 87737449 87737527 -115348005 + L2 LINE L2 3005 3085 -187 355 267 66 40 chr5 87738142 87738345 -115347187 + L1MEc LINE L1 870 1032 -5384 * 513 254 45 40 chr5 87738332 87738558 -115346974 + L1MEc LINE L1 1755 2090 -4478 1008 105 39 22 chr5 87738635 87738816 -115346716 - L1MB2 LINE L1 0 6171 5988 1927 171 0 7 chr5 87738896 87739206 -115346326 - AluJb SINE Alu -4 308 1 1153 170 0 111 chr5 87739286 87739557 -115345975 - AluJo SINE Alu -4 308 68 555 242 48 42 chr5 87739836 87740001 -115345531 - MIR SINE MIR -58 204 39 2354 84 3 13 chr5 87740708 87741018 -115344514 - AluSx SINE Alu -5 307 1 1572 214 155 7 chr5 87741942 87742386 -115343146 + L1MD3 LINE L1 7476 7985 -10 224 364 11 0 chr5 87742945 87743033 -115342499 + MIR3 SINE MIR 72 160 -48 655 195 71 18 chr5 87743053 87743222 -115342310 - MER3 DNA MER1_type -78 131 1 2098 77 21 35 chr5 87743248 87743556 -115341976 - AluSq SINE Alu 0 306 3 2147 155 55 0 chr5 87743586 87743947 -115341585 + MLT1B LTR MaLR 8 388 -2 1996 268 140 37 chr5 87744979 87746379 -115339153 + L1MCc LINE L1 338 1896 -4887 977 264 47 7 chr5 87746372 87746411 -115339121 + L1MCc LINE L1 2198 2234 -4888 * 1872 140 26 35 chr5 87746411 87746753 -115338779 + MER44D DNA MER2_type 1 609 0 977 264 47 7 chr5 87746753 87747012 -115338520 + L1MCc LINE L1 2234 2508 -4614 802 233 112 22 chr5 87747042 87747355 -115338177 + L1M4 LINE L1 4863 5203 -943 1918 150 7 0 chr5 87747361 87747647 -115337885 + AluSx SINE Alu 11 298 -14 286 91 0 23 chr5 87747657 87747701 -115337831 + L1 LINE L1 3811 3853 -2293 1939 157 13 0 chr5 87747702 87748002 -115337530 + AluSx SINE Alu 3 306 -6 2079 166 68 9 chr5 87748003 87748595 -115336937 + L1M3 LINE L1 5062 5679 -501 23 0 0 0 chr5 87748631 87748654 -115336878 + AT_rich Low_complexity Low_complexity 1 23 0 2275 107 10 0 chr5 87748759 87749068 -115336464 + AluSp SINE Alu 1 312 -1 1879 169 0 0 chr5 87749752 87750054 -115335478 + AluJb SINE Alu 1 302 -10 2180 109 0 0 chr5 87750386 87750671 -115334861 + AluSx SINE Alu 1 285 -27 252 59 0 0 chr5 87750671 87750705 -115334827 + (TTAAA)n Simple_repeat Simple_repeat 3 36 0 1288 239 27 63 chr5 87751093 87751619 -115333913 + L1MDb LINE L1 775 1281 -5128 324 280 40 60 chr5 87801690 87801840 -115283692 + L1M3c LINE L1 1193 1339 -4802 209 229 16 0 chr5 87805356 87805417 -115280115 + (TA)n Simple_repeat Simple_repeat 1 62 0 189 170 11 53 chr5 87806331 87806425 -115279107 + GA-rich Low_complexity Low_complexity 3 92 0 222 163 0 41 chr5 87809570 87809619 -115275913 + A-rich Low_complexity Low_complexity 4 50 0 208 250 0 0 chr5 87811730 87811786 -115273746 + A-rich Low_complexity Low_complexity 1 56 0 212 219 35 26 chr5 87823354 87823468 -115262064 + (TTGTG)n Simple_repeat Simple_repeat 1 115 0 2022 125 3 7 chr5 87823593 87823898 -115261634 - AluY SINE Alu -7 304 1 682 221 63 95 chr5 87823898 87824096 -115261436 - LTR29 LTR ERV1 -173 471 268 2237 97 0 3 chr5 87824096 87824385 -115261147 + AluSx SINE Alu 3 290 -22 682 221 63 95 chr5 87824385 87824604 -115260928 - LTR29 LTR ERV1 -376 268 76 2316 108 0 13 chr5 87824604 87824918 -115260614 - AluSx SINE Alu -2 310 1 682 221 63 95 chr5 87824918 87824982 -115260550 - LTR29 LTR ERV1 -568 76 12 952 114 0 0 chr5 87825210 87825350 -115260182 - LTR23 LTR ERV1 -5 432 293 792 104 0 79 chr5 87825351 87825515 -115260017 - AluSp/q SINE Alu -1 312 162 790 112 32 0 chr5 87826332 87826457 -115259075 - LTR23 LTR ERV1 -190 247 119 1367 99 11 0 chr5 87826457 87826639 -115258893 + AluSg/x SINE Alu 116 299 -13 603 165 41 8 chr5 87826639 87826760 -115258772 - LTR23 LTR ERV1 -309 128 4 572 179 8 0 chr5 87827357 87827474 -115258058 + CT-rich Low_complexity Low_complexity 3 120 0 1411 175 23 66 chr5 87827629 87827863 -115257669 - MER4D LTR ERV1 0 903 687 2317 109 0 0 chr5 87827863 87828166 -115257366 + AluSc SINE Alu 7 309 0 1411 175 23 66 chr5 87828166 87828279 -115257253 - MER4D LTR ERV1 -216 687 571 2260 109 3 0 chr5 87828282 87828575 -115256957 - AluSx SINE Alu -18 294 1 1658 134 17 45 chr5 87828630 87828828 -115256704 - MER49 LTR ERV1 -639 284 95 2129 75 68 4 chr5 87828828 87829106 -115256426 - AluY SINE Alu -15 296 1 1658 134 17 45 chr5 87829106 87829199 -115256333 - MER49 LTR ERV1 -828 95 1 1992 118 33 0 chr5 87829201 87829501 -115256031 - AluSg1 SINE Alu 0 309 1 2107 109 17 10 chr5 87829507 87829800 -115255732 - AluSg SINE Alu -15 295 1 819 169 0 0 chr5 87830095 87830219 -115255313 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr5 87830219 87830240 -115255292 + AT_rich Low_complexity Low_complexity 1 21 0 717 209 42 55 chr5 87830352 87830773 -115254759 - LTR49-int LTR ERV1 -1942 2938 1865 1290 172 29 115 chr5 87830787 87830850 -115254682 - LTR49-int LTR ERV1 -3202 1921 1854 2242 116 0 17 chr5 87830850 87831151 -115254381 + AluSx SINE Alu 1 296 -16 1290 172 29 115 chr5 87831151 87831540 -115253992 - LTR49-int LTR ERV1 -3269 1854 1508 2335 78 3 10 chr5 87831548 87831843 -115253689 - AluSg SINE Alu -7 303 11 300 124 15 175 chr5 87831996 87832133 -115253399 - AluSp/q SINE Alu -4 299 185 1409 178 41 95 chr5 87832254 87832437 -115253095 - LTR49-int LTR ERV1 -3023 1921 1730 1363 115 0 149 chr5 87832437 87832785 -115252747 + AluSx SINE Alu 1 296 -16 1409 178 41 95 chr5 87832785 87833182 -115252350 - LTR49-int LTR ERV1 -3214 1730 1511 2397 82 3 10 chr5 87833182 87833487 -115252045 - AluSg SINE Alu -7 303 1 1409 178 41 95 chr5 87833487 87833578 -115251954 - LTR49-int LTR ERV1 -3433 1511 1417 2314 88 3 0 chr5 87833591 87833888 -115251644 - AluSp SINE Alu -15 298 1 359 161 0 0 chr5 87833948 87834010 -115251522 - MER34C LTR ERV1 -360 225 164 4295 194 34 68 chr5 87834050 87834939 -115250593 - LTR49-int LTR ERV1 -2686 2194 1086 2251 122 0 0 chr5 87834939 87835234 -115250298 - AluSx SINE Alu -17 295 1 4295 194 34 68 chr5 87835234 87835559 -115249973 - LTR49-int LTR ERV1 -3794 1086 751 2287 97 10 0 chr5 87835563 87835853 -115249679 + AluSg SINE Alu 1 293 -17 2708 113 43 5 chr5 87836731 87837148 -115248384 - LTR23 LTR ERV1 0 437 5 3131 124 6 134 chr5 87837361 87837517 -115248015 + LTR8 LTR ERV1 1 175 -516 1629 163 0 0 chr5 87837517 87837756 -115247776 - AluSx SINE Alu -12 300 62 3131 124 6 134 chr5 87837756 87838331 -115247201 + LTR8 LTR ERV1 175 638 -53 729 167 17 72 chr5 87838449 87838629 -115246903 + HUERS-P1 LTR ERV1 7 176 -6087 4042 111 7 73 chr5 87838750 87838838 -115246694 + LTR8 LTR ERV1 62 154 -537 1629 163 0 0 chr5 87838838 87839077 -115246455 - AluSx SINE Alu -12 300 62 4042 111 7 73 chr5 87839077 87839662 -115245870 + LTR8 LTR ERV1 154 691 0 1233 158 21 0 chr5 87839667 87839857 -115245675 + HUERS-P1 LTR ERV1 7 200 -6063 1087 123 0 0 chr5 87839857 87840003 -115245529 + LTR8 LTR ERV1 546 691 0 2114 207 48 63 chr5 87840003 87840674 -115244858 + HUERS-P1 LTR ERV1 1 797 -5466 439 145 0 0 chr5 87840664 87840726 -115244806 + HUERS-P1 LTR ERV1 1131 1192 -5071 * 4471 146 78 59 chr5 87840724 87841085 -115244447 + HUERS-P1 LTR ERV1 5329 5681 -582 504 0 0 0 chr5 87841085 87841141 -115244391 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 2061 119 0 0 chr5 87841141 87841418 -115244114 - AluSc SINE Alu -32 277 1 4471 146 78 59 chr5 87841418 87841972 -115243560 + HUERS-P1 LTR ERV1 5680 6263 0 3294 111 18 87 chr5 87841972 87842545 -115242987 + LTR8 LTR ERV1 1 531 -160 2151 114 0 3 chr5 87842545 87842859 -115242673 + AluSg SINE Alu 1 310 0 3294 111 18 87 chr5 87842859 87842896 -115242636 + LTR8 LTR ERV1 531 569 -122 3844 80 8 12 chr5 87843091 87843593 -115241939 - LTR3b LTR ERVK 0 500 1 2353 103 0 0 chr5 87843710 87844011 -115241521 + AluSx SINE Alu 1 301 -11 648 48 12 0 chr5 87844968 87845052 -115240480 + HY3 scRNA scRNA 15 99 -2 884 147 0 23 chr5 87845563 87845692 -115239840 + FLAM_C SINE Alu 2 127 -6 21 36 0 0 chr5 87845692 87845720 -115239812 + AT_rich Low_complexity Low_complexity 1 28 0 2475 138 69 17 chr5 87845898 87846305 -115239227 + MSTA LTR MaLR 1 428 0 1278 192 21 89 chr5 87846702 87847151 -115238381 - MLT2B1 LTR ERVL -2 518 1 1403 123 0 0 chr5 87847577 87847764 -115237768 + AluSx SINE Alu 1 187 -125 4616 57 2 7 chr5 87847774 87848355 -115237177 - MER4E LTR ERV1 -188 578 1 2026 124 16 20 chr5 87848422 87848728 -115236804 - AluSx SINE Alu -7 305 1 984 123 45 13 chr5 87849049 87849204 -115236328 + LTR8 LTR ERV1 521 680 -11 265 235 0 0 chr5 87849480 87849531 -115236001 - L2 LINE L2 0 3313 3263 370 290 21 14 chr5 87850346 87850491 -115235041 + L1MC4a LINE L1 5455 5600 -566 301 234 85 11 chr5 87850526 87850620 -115234912 - MER112 DNA MER1_type -1 259 159 2169 125 0 0 chr5 87850623 87850927 -115234605 + AluSx SINE Alu 1 304 -8 845 161 15 0 chr5 87850934 87851064 -115234468 + FAM SINE Alu 12 143 -42 2207 85 37 7 chr5 87851134 87851429 -115234103 + AluSp SINE Alu 2 305 -8 393 278 135 79 chr5 87851534 87851926 -115233606 + L1MC4a LINE L1 5634 6047 -1761 2357 98 0 0 chr5 87851960 87852257 -115233275 - AluY SINE Alu -14 297 1 2222 129 3 0 chr5 87852401 87852710 -115232822 + AluSq SINE Alu 1 310 -3 1033 209 82 84 chr5 87852728 87853229 -115232303 + MLT1F LTR MaLR 21 540 -2 2095 109 16 0 chr5 87853372 87853675 -115231857 + AluSx SINE Alu 1 308 -4 283 254 36 45 chr5 87853694 87853804 -115231728 + MIR SINE MIR 154 262 0 394 212 0 110 chr5 87853817 87853846 -115231686 - MIR3 SINE MIR -28 180 149 2313 56 20 33 chr5 87853846 87854151 -115231381 + AluY SINE Alu 1 301 -10 394 212 0 110 chr5 87854151 87854239 -115231293 - MIR3 SINE MIR -59 149 76 372 263 158 26 chr5 87854296 87854485 -115231047 - MIR SINE MIR -11 251 40 1830 170 9 35 chr5 87854508 87854948 -115230584 - AluJo SINE Alu 0 432 1 422 301 68 12 chr5 87855370 87855533 -115229999 - MIR SINE MIR -71 191 20 616 272 46 54 chr5 87855553 87855856 -115229676 + L1MC4a LINE L1 5622 5926 -195 635 48 36 12 chr5 87855857 87855941 -115229591 + LTR54B LTR ERV1 1 86 -412 2447 72 0 13 chr5 87855961 87856265 -115229267 - AluSx SINE Alu -12 300 1 234 275 14 14 chr5 87856430 87856499 -115229033 + LTR58 LTR ERV1 350 418 -261 231 204 41 0 chr5 87856740 87856789 -115228743 + LTR54B LTR ERV1 79 129 -369 751 171 126 63 chr5 87856840 87857060 -115228472 + LTR54B LTR ERV1 213 454 -44 2240 87 14 0 chr5 87857060 87857348 -115228184 + AluSp SINE Alu 7 298 -15 751 171 126 63 chr5 87857348 87857396 -115228136 + LTR54B LTR ERV1 454 498 0 2320 87 0 0 chr5 87857605 87857893 -115227639 - AluSg SINE Alu -20 290 3 1617 189 3 33 chr5 87857920 87858221 -115227311 + AluJo SINE Alu 1 292 -20 766 186 229 47 chr5 87858721 87858893 -115226639 + MER66A LTR ERV1 29 168 -310 1803 112 8 4 chr5 87858893 87859144 -115226388 + AluSx SINE Alu 45 296 -16 766 186 229 47 chr5 87859144 87859224 -115226308 + MER66A LTR ERV1 168 327 -151 277 256 0 107 chr5 87859224 87859392 -115226140 + MER66A LTR ERV1 289 438 -40 279 0 0 0 chr5 87859429 87859460 -115226072 + (TG)n Simple_repeat Simple_repeat 2 32 0 1799 160 31 0 chr5 87859524 87859817 -115225715 - AluJb SINE Alu -10 302 1 2311 82 0 0 chr5 87859826 87860117 -115225415 - AluY SINE Alu -20 291 1 636 293 40 18 chr5 87860435 87860708 -115224824 - L1ME3 LINE L1 -211 5951 5673 2348 104 0 0 chr5 87860711 87861019 -115224513 - AluSx SINE Alu -4 308 1 279 247 11 43 chr5 87861021 87861114 -115224418 - L1ME3 LINE L1 -568 5553 5464 21 0 0 0 chr5 87861148 87861169 -115224363 + AT_rich Low_complexity Low_complexity 1 21 0 2343 61 17 3 chr5 87861633 87861927 -115223605 - AluSc SINE Alu -11 298 1 2623 51 0 6 chr5 87861938 87862251 -115223281 - AluY SINE Alu 0 311 1 479 126 84 21 chr5 87862648 87862743 -115222789 - MIR SINE MIR -73 189 89 1412 136 0 25 chr5 87863189 87863432 -115222100 + AluSx SINE Alu 1 237 -75 234 187 22 72 chr5 87863494 87863633 -115221899 + (CACAA)n Simple_repeat Simple_repeat 3 134 0 281 208 32 40 chr5 87863788 87863913 -115221619 + A-rich Low_complexity Low_complexity 4 127 0 260 233 16 39 chr5 87863964 87864093 -115221439 + A-rich Low_complexity Low_complexity 5 130 0 2327 14 0 25 chr5 87864228 87864512 -115221020 - AluY SINE Alu -34 277 1 2434 74 0 3 chr5 87864797 87865108 -115220424 + AluY SINE Alu 1 310 -1 300 120 3 0 chr5 87865114 87865164 -115220368 + MER39B LTR ERV1 496 588 -115 1836 149 0 14 chr5 87865895 87866183 -115219349 - AluJb SINE Alu -22 290 7 980 73 8 0 chr5 87866252 87866375 -115219157 + AluSg/x SINE Alu 174 297 -13 274 122 0 0 chr5 87866963 87867004 -115218528 + L1MC2 LINE L1 6289 6329 -15 2207 103 3 27 chr5 87867008 87867309 -115218223 + AluSx SINE Alu 6 299 -13 390 290 160 25 chr5 87867309 87867509 -115218023 - MIR SINE MIR -27 235 9 371 311 62 0 chr5 87867559 87867720 -115217812 + MIR3 SINE MIR 25 195 -13 28 0 0 0 chr5 87867783 87867811 -115217721 + AT_rich Low_complexity Low_complexity 1 28 0 428 306 151 37 chr5 87868259 87868716 -115216816 + LTR33 LTR ERVL 13 521 0 210 246 18 146 chr5 87868780 87868861 -115216671 - L2 LINE L2 -5 3308 3259 787 100 0 0 chr5 87868861 87868961 -115216571 + HY3 scRNA scRNA 1 100 -1 210 246 18 146 chr5 87868961 87869050 -115216482 - L2 LINE L2 -54 3259 3160 1066 122 0 7 chr5 87869142 87869289 -115216243 - AluSq/x SINE Alu -165 147 2 285 95 0 0 chr5 87869372 87869442 -115216090 - Alu SINE Alu 0 308 246 895 144 0 8 chr5 87869529 87869661 -115215871 + FLAM_C SINE Alu 2 132 -1 2164 124 98 54 chr5 87870623 87871033 -115214499 + MSTC LTR MaLR 1 428 0 240 235 142 105 chr5 87871885 87872016 -115213516 + L1MC/D LINE L1 5656 5781 -2027 609 110 0 0 chr5 87872016 87872107 -115213425 + (TA)n Simple_repeat Simple_repeat 2 92 0 240 235 142 105 chr5 87872107 87872222 -115213310 + L1MC/D LINE L1 5781 5911 -1897 189 0 0 0 chr5 87873071 87873092 -115212440 + (TA)n Simple_repeat Simple_repeat 1 21 0 273 57 0 0 chr5 87873092 87873127 -115212405 + (GA)n Simple_repeat Simple_repeat 1 35 0 2244 91 0 17 chr5 87873269 87873405 -115212127 + AluSx SINE Alu 1 138 -174 1902 81 25 109 chr5 87873405 87873725 -115211807 + AluYb8 SINE Alu 17 309 -9 2244 91 0 17 chr5 87873725 87873886 -115211646 + AluSx SINE Alu 138 293 -19 2269 119 3 0 chr5 87873912 87874224 -115211308 + AluSp SINE Alu 1 313 0 1989 166 0 3 chr5 87874469 87874782 -115210750 + AluSx SINE Alu 1 312 0 1773 176 3 0 chr5 87875588 87875884 -115209648 - AluJo SINE Alu -12 300 4 2318 89 3 0 chr5 87875968 87876270 -115209262 - AluSg SINE Alu -7 303 1 2167 94 3 3 chr5 87876506 87876794 -115208738 + AluSx SINE Alu 25 312 0 1872 174 3 3 chr5 87877125 87877429 -115208103 - AluJb SINE Alu -8 304 1 22 35 0 0 chr5 87877547 87877576 -115207956 + AT_rich Low_complexity Low_complexity 1 29 0 1037 204 35 48 chr5 87877645 87877916 -115207616 + MIR SINE MIR 1 262 0 748 266 60 26 chr5 87878687 87878920 -115206612 - MIR SINE MIR -2 260 20 1609 166 32 14 chr5 87879188 87879491 -115206041 + AluJo SINE Alu 1 308 0 326 346 19 0 chr5 87879956 87880060 -115205472 - MIR SINE MIR -61 147 42 261 283 101 20 chr5 87880128 87880227 -115205305 + MIR SINE MIR 33 139 -69 1591 176 16 19 chr5 87880229 87880563 -115204969 + MER33 DNA MER1_type 1 318 -6 1133 201 9 23 chr5 87880599 87880818 -115204714 - MER58A DNA MER1_type 0 224 9 21 0 0 0 chr5 87881763 87881784 -115203748 + AT_rich Low_complexity Low_complexity 1 21 0 218 179 15 60 chr5 87881795 87881862 -115203670 + GA-rich Low_complexity Low_complexity 1 64 0 515 220 110 8 chr5 87881894 87882012 -115203520 - MER5B DNA MER1_type -48 130 1 233 29 29 0 chr5 87882474 87882508 -115203024 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 586 236 98 20 chr5 87882709 87882912 -115202620 + L2 LINE L2 3094 3312 -1 2479 63 3 3 chr5 87882939 87883241 -115202291 + AluSp SINE Alu 1 302 -11 2097 140 7 0 chr5 87883690 87883990 -115201542 + AluSx SINE Alu 1 302 -10 1687 172 7 14 chr5 87884006 87884302 -115201230 + AluJb SINE Alu 1 294 -18 1953 131 14 17 chr5 87884305 87884602 -115200930 + AluSx SINE Alu 1 296 -16 2159 109 0 0 chr5 87884604 87884926 -115200606 + AluSp SINE Alu 1 322 0 2159 103 0 0 chr5 87884929 87885220 -115200312 + AluSg SINE Alu 1 291 -19 23 0 0 0 chr5 87885231 87885254 -115200278 + AT_rich Low_complexity Low_complexity 1 23 0 607 187 8 16 chr5 87886615 87886738 -115198794 + L2 LINE L2 3192 3313 0 356 261 93 80 chr5 87888124 87888299 -115197233 - MIR SINE MIR -61 147 19 977 188 3 159 chr5 87888315 87888667 -115196865 - AluJo SINE Alu -2 300 4 2362 78 3 19 chr5 87888836 87889144 -115196388 + AluSp SINE Alu 1 303 -10 21 57 0 0 chr5 87889191 87889226 -115196306 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 87890096 87890126 -115195406 + AT_rich Low_complexity Low_complexity 1 30 0 403 315 22 3 chr5 87890252 87890387 -115195145 - MIR3 SINE MIR -1 207 72 1766 125 57 14 chr5 87890748 87890760 -115194772 - AluSx SINE Alu -19 293 283 189 0 0 0 chr5 87890760 87890781 -115194751 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1766 125 57 14 chr5 87890781 87891049 -115194483 - AluSx SINE Alu -29 283 1 244 91 0 0 chr5 87891089 87891122 -115194410 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 697 150 6 28 chr5 87891122 87891302 -115194230 + CT-rich Low_complexity Low_complexity 2 177 0 1386 131 16 0 chr5 87891308 87891553 -115193979 - L1MA8 LINE L1 -11 6280 6032 928 256 32 10 chr5 87891581 87891894 -115193638 + L1ME3 LINE L1 5631 5950 -220 287 261 0 0 chr5 87892007 87892076 -115193456 + L1ME3 LINE L1 6009 6077 -85 1597 174 66 7 chr5 87892363 87892651 -115192881 + AluJo SINE Alu 1 305 -7 518 145 12 0 chr5 87892830 87892913 -115192619 - AluS SINE Alu -228 84 1 339 294 57 57 chr5 87892955 87893166 -115192366 + MIR SINE MIR 2 212 -50 579 304 55 14 chr5 87893814 87894031 -115191501 + MIR SINE MIR 24 249 -13 2264 102 3 0 chr5 87894156 87894451 -115191081 + AluSx SINE Alu 1 296 -16 229 177 48 16 chr5 87894451 87894513 -115191019 + Charlie1a DNA MER1_type 88 151 -1304 1933 157 19 16 chr5 87894523 87894786 -115190746 + L1M4 LINE L1 5431 5697 -487 1599 172 57 35 chr5 87894786 87895153 -115190379 - THE1C LTR MaLR 0 375 1 1933 157 19 16 chr5 87895153 87895259 -115190273 + L1M4 LINE L1 5697 5801 -383 754 177 59 54 chr5 87895259 87895445 -115190087 - MER20 DNA MER1_type -32 187 1 2245 182 79 46 chr5 87895451 87895915 -115189617 + Charlie1a DNA MER1_type 208 700 -2061 2324 102 0 10 chr5 87895915 87896220 -115189312 + AluSx SINE Alu 1 302 -10 2245 182 79 46 chr5 87896220 87896403 -115189129 + Charlie1a DNA MER1_type 700 876 -579 2172 96 48 0 chr5 87896408 87896700 -115188832 + AluSx SINE Alu 1 306 -6 358 271 160 0 chr5 87896751 87896817 -115188715 - L1MA10 LINE L1 0 6334 6269 614 237 39 99 chr5 87896817 87897172 -115188360 - L1ME1 LINE L1 -80 6086 5753 2249 107 3 0 chr5 87897179 87897479 -115188053 - AluSp SINE Alu -12 301 1 549 211 102 0 chr5 87897501 87897629 -115187903 - FRAM SINE Alu -8 168 28 1235 112 121 5 chr5 87897630 87897836 -115187696 - MER30 DNA MER1_type 0 230 1 637 140 19 9 chr5 87897842 87897949 -115187583 - FLAM_C SINE Alu -24 119 12 1437 141 107 11 chr5 87897999 87898261 -115187271 - AluJb SINE Alu -4 308 22 1632 183 55 109 chr5 87898263 87898735 -115186797 - L1ME1 LINE L1 -449 5717 5221 2444 87 0 3 chr5 87898735 87899046 -115186486 - AluSg SINE Alu 0 310 1 1632 183 55 109 chr5 87899046 87899067 -115186465 - L1ME1 LINE L1 -945 5221 5270 1817 176 3 10 chr5 87899067 87899374 -115186158 + AluJb SINE Alu 1 305 -7 1632 183 55 109 chr5 87899374 87899454 -115186078 - L1ME1 LINE L1 -895 5271 5188 598 142 75 30 chr5 87899455 87899589 -115185943 - AluJo SINE Alu -58 254 115 1866 223 98 11 chr5 87899591 87900152 -115185380 - L1ME1 LINE L1 -1770 4376 3767 26 30 0 0 chr5 87900158 87900191 -115185341 + AT_rich Low_complexity Low_complexity 1 33 0 688 270 80 8 chr5 87900313 87900576 -115184956 - L1ME1 LINE L1 -2309 3837 3556 * 2615 229 52 42 chr5 87900570 87901619 -115183913 + L1M4 LINE L1 2291 3350 -2796 180 83 0 56 chr5 87901684 87901720 -115183812 + L2 LINE L2 3280 3313 0 2469 63 3 0 chr5 87901776 87902076 -115183456 - AluSg SINE Alu -9 301 1 216 172 0 0 chr5 87902432 87902490 -115183042 + G-rich Low_complexity Low_complexity 1 58 0 2356 87 3 10 chr5 87904185 87904496 -115181036 - AluSx SINE Alu -3 309 1 1782 143 25 32 chr5 87905791 87905973 -115179559 - AluJb SINE Alu 0 312 130 2166 121 7 0 chr5 87905973 87906280 -115179252 - AluSx SINE Alu -3 309 1 2111 96 24 14 chr5 87906283 87906576 -115178956 - AluSq SINE Alu -4 309 14 1782 143 25 32 chr5 87906576 87906703 -115178829 - AluJb SINE Alu -184 128 1 32 0 0 0 chr5 87907368 87907400 -115178132 + AT_rich Low_complexity Low_complexity 1 32 0 255 267 154 32 chr5 87907454 87908322 -115177210 - HAL1 LINE L1 -415 2092 1037 1736 190 0 23 chr5 87908322 87908627 -115176905 - AluJb SINE Alu -14 298 1 255 267 154 32 chr5 87908627 87908660 -115176872 - HAL1 LINE L1 -1470 1037 1009 210 164 33 16 chr5 87909943 87910004 -115175528 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 325 315 0 0 chr5 87910007 87910096 -115175436 + L1MC4 LINE L1 6614 6702 -1340 * 327 307 0 0 chr5 87910039 87910127 -115175405 - L1MC4 LINE L1 -1339 6703 6616 192 152 0 0 chr5 87910133 87910166 -115175366 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 391 250 0 0 chr5 87910185 87910273 -115175259 - L1MC4 LINE L1 -1339 6703 6616 1255 118 0 0 chr5 87910274 87910435 -115175097 + AluSg/x SINE Alu 135 295 -17 2123 141 3 3 chr5 87910982 87911287 -115174245 + AluSx SINE Alu 3 307 -5 9345 136 28 30 chr5 87911288 87914050 -115171482 + L1MA3 LINE L1 3327 6095 -210 2301 86 10 0 chr5 87914050 87914340 -115171192 - AluSp SINE Alu -18 295 3 9345 136 28 30 chr5 87914340 87914399 -115171133 + L1MA3 LINE L1 6095 6153 -152 2419 80 7 0 chr5 87914399 87914701 -115170831 + AluSc SINE Alu 4 307 -2 9345 136 28 30 chr5 87914701 87914862 -115170670 + L1MA3 LINE L1 6153 6305 0 201 74 0 0 chr5 87915431 87915458 -115170074 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2177 69 22 4 chr5 87915736 87916030 -115169502 + AluSc SINE Alu 1 299 0 677 213 0 0 chr5 87916187 87916314 -115169218 + FLAM_A SINE Alu 2 128 -5 22 0 0 0 chr5 87916505 87916527 -115169005 + AT_rich Low_complexity Low_complexity 1 22 0 2119 137 0 6 chr5 87916529 87916842 -115168690 + AluSx SINE Alu 1 311 -1 2193 53 46 56 chr5 87916995 87917298 -115168234 - AluY SINE Alu -11 300 1 2044 99 88 0 chr5 87917454 87917737 -115167795 + AluSp SINE Alu 1 308 -5 845 307 71 59 chr5 87918960 87919608 -115165924 + L2 LINE L2 1200 1855 -1459 1130 314 72 59 chr5 87919629 87919925 -115165607 + L2 LINE L2 2202 2493 -820 622 212 174 5 chr5 87919925 87920109 -115165423 + MER20 DNA MER1_type 1 215 -4 1130 314 72 59 chr5 87920109 87920586 -115164946 + L2 LINE L2 2493 2962 -351 1778 122 63 0 chr5 87920586 87920856 -115164676 - AluSx SINE Alu -25 287 1 1130 314 72 59 chr5 87920856 87921010 -115164522 + L2 LINE L2 2962 3113 -200 2283 88 3 13 chr5 87921010 87921315 -115164217 - AluSx SINE Alu -10 302 1 1130 314 72 59 chr5 87921315 87921330 -115164202 + L2 LINE L2 3113 3126 -187 2521 55 0 0 chr5 87921330 87921621 -115163911 - AluY SINE Alu -20 291 1 1130 314 72 59 chr5 87921621 87921751 -115163781 + L2 LINE L2 3126 3294 -19 194 295 32 42 chr5 87921756 87921851 -115163681 + L2 LINE L2 2185 2278 -1036 540 254 148 0 chr5 87923114 87923256 -115162276 + MIR SINE MIR 54 216 -46 2027 146 7 0 chr5 87923382 87923683 -115161849 + AluSq SINE Alu 1 303 -10 2415 78 0 0 chr5 87924021 87924315 -115161217 - AluSg SINE Alu -15 295 2 717 131 31 15 chr5 87924405 87924535 -115160997 + FLAM_C SINE Alu 2 133 0 2033 88 20 7 chr5 87924554 87924860 -115160672 + AluY SINE Alu 1 310 -1 1782 143 25 32 chr5 87926155 87926337 -115159195 - AluJb SINE Alu 0 312 130 2166 121 7 0 chr5 87926337 87926644 -115158888 - AluSx SINE Alu -3 309 1 2111 96 24 14 chr5 87926647 87926940 -115158592 - AluSq SINE Alu -4 309 14 1782 143 25 32 chr5 87926940 87927067 -115158465 - AluJb SINE Alu -184 128 1 32 0 0 0 chr5 87927732 87927764 -115157768 + AT_rich Low_complexity Low_complexity 1 32 0 255 268 139 32 chr5 87927818 87928686 -115156846 - HAL1 LINE L1 -415 2092 953 1736 190 0 23 chr5 87928686 87928991 -115156541 - AluJb SINE Alu -14 298 1 255 268 139 32 chr5 87928991 87929228 -115156304 - HAL1 LINE L1 -1554 953 743 2077 135 35 16 chr5 87930873 87931244 -115154288 - MLT1B LTR MaLR 0 390 13 474 274 139 14 chr5 87931575 87931798 -115153734 - MIR SINE MIR 0 262 12 2445 90 0 0 chr5 87931933 87932243 -115153289 + AluY SINE Alu 1 310 -1 1981 130 3 3 chr5 87932475 87932767 -115152765 + AluSx SINE Alu 1 292 -20 630 242 92 36 chr5 87932914 87933249 -115152283 - L1MC4 LINE L1 0 8042 7689 218 352 28 0 chr5 87934727 87934798 -115150734 + L2 LINE L2 3184 3256 -16 4502 165 43 43 chr5 87934882 87936171 -115149361 - L1MB7 LINE L1 -19 6165 4886 2271 103 3 0 chr5 87936291 87936583 -115148949 - AluSg SINE Alu -17 293 1 703 155 13 65 chr5 87936605 87936760 -115148772 - FRAM SINE Alu -26 150 4 821 111 0 0 chr5 87936861 87936969 -115148563 - AluSp SINE Alu -205 108 1 1980 98 65 4 chr5 87937642 87937917 -115147615 + AluSx SINE Alu 1 292 -20 198 0 0 0 chr5 87938042 87938064 -115147468 + (CAGG)n Simple_repeat Simple_repeat 3 24 0 180 229 62 0 chr5 87938305 87938353 -115147179 + MIR SINE MIR 86 136 -126 2026 204 29 13 chr5 87938417 87938868 -115146664 + MER39 LTR ERV1 250 707 0 279 0 0 0 chr5 87939453 87939484 -115146048 + (CA)n Simple_repeat Simple_repeat 2 32 0 779 272 135 57 chr5 87940290 87940523 -115145009 - L2 LINE L2 -2 3311 3097 1587 191 64 42 chr5 87940523 87940889 -115144643 - MLT1C LTR MaLR 0 467 88 1980 128 45 0 chr5 87940889 87941178 -115144354 - AluSx SINE Alu -10 302 1 1587 191 64 42 chr5 87941178 87941266 -115144266 - MLT1C LTR MaLR -379 88 3 779 272 135 57 chr5 87941266 87941587 -115143945 - L2 LINE L2 -216 3097 2691 2319 82 0 41 chr5 87941587 87941904 -115143628 + AluSx SINE Alu 1 304 -8 779 272 135 57 chr5 87941904 87941971 -115143561 - L2 LINE L2 -622 2691 2631 359 274 142 0 chr5 87942247 87942353 -115143179 + L2 LINE L2 3191 3311 -2 1988 158 0 7 chr5 87942469 87942779 -115142753 + AluSx SINE Alu 3 310 -2 1614 157 6 67 chr5 87943008 87943147 -115142385 + AluJo SINE Alu 2 148 -164 2205 126 0 0 chr5 87943147 87943462 -115142070 + AluSx SINE Alu 1 315 0 1614 157 6 67 chr5 87943462 87943632 -115141900 + AluJo SINE Alu 148 294 -18 268 286 57 7 chr5 87943717 87943749 -115141783 + L1M4 LINE L1 5124 5153 -993 357 24 0 0 chr5 87943749 87943791 -115141741 + (CA)n Simple_repeat Simple_repeat 2 43 0 268 286 57 7 chr5 87943791 87943898 -115141634 + L1M4 LINE L1 5153 5270 -876 349 267 38 8 chr5 87944225 87944356 -115141176 - L1ME4a LINE L1 -3 6118 5984 842 158 7 7 chr5 87945376 87945515 -115140017 + AluJo SINE Alu 2 140 -172 1656 149 0 27 chr5 87945515 87945776 -115139756 + AluSx SINE Alu 1 254 -58 233 294 59 25 chr5 87945872 87945991 -115139541 - L2 LINE L2 -17 3255 3133 2503 72 3 0 chr5 87946422 87946727 -115138805 + AluSc SINE Alu 1 306 -3 203 79 26 0 chr5 87948168 87948206 -115137326 + (TTTTTG)n Simple_repeat Simple_repeat 1 39 0 2219 132 0 0 chr5 87948255 87948565 -115136967 - AluSg SINE Alu 0 310 1 242 280 93 53 chr5 87948592 87948742 -115136790 - MIR3 SINE MIR -49 159 4 194 286 29 29 chr5 87949171 87949276 -115136256 + L2 LINE L2 2550 2654 -660 372 22 0 0 chr5 87949456 87949501 -115136031 + (TC)n Simple_repeat Simple_repeat 1 45 0 1814 170 3 52 chr5 87950306 87950630 -115134902 - AluJb SINE Alu -3 309 2 369 0 0 0 chr5 87950630 87950671 -115134861 + (TTA)n Simple_repeat Simple_repeat 2 42 0 780 171 123 0 chr5 87950671 87950817 -115134715 - AluJo SINE Alu -29 283 120 22 0 0 0 chr5 87951167 87951189 -115134343 + AT_rich Low_complexity Low_complexity 1 22 0 1568 209 20 58 chr5 87951212 87951609 -115133923 + L1M4 LINE L1 14 395 -6147 1743 180 31 36 chr5 87951610 87951966 -115133566 + MLT2D LTR ERVL 3 356 -58 955 211 22 0 chr5 87952030 87952210 -115133322 + MLT1A2 LTR MaLR 191 374 0 1106 211 137 7 chr5 87952210 87952495 -115133037 + L1M4 LINE L1 4961 5282 -864 21855 118 25 18 chr5 87952507 87955918 -115129614 + L1P LINE L1 11 3445 -2701 45476 37 1 1 chr5 87956018 87961522 -115124010 - L1P1 LINE L1 -655 5500 1 1139 156 0 40 chr5 87961640 87961839 -115123693 - AluJo SINE Alu -21 291 101 244 130 25 222 chr5 87962161 87962323 -115123209 - L1ME4a LINE L1 -2 6119 5990 2031 145 0 0 chr5 87962450 87962733 -115122799 - AluSx SINE Alu -29 283 1 22 0 0 0 chr5 87962798 87962820 -115122712 + AT_rich Low_complexity Low_complexity 1 22 0 604 168 61 51 chr5 87962826 87963022 -115122510 - HAL1b LINE L1 -11 1337 1140 6431 80 11 0 chr5 87963040 87963881 -115121651 + L1PA11 LINE L1 5323 6172 -2 555 270 67 85 chr5 87963925 87964266 -115121266 - L1ME3 LINE L1 -3 6159 5825 386 240 39 19 chr5 87964271 87964425 -115121107 - HAL1b LINE L1 -254 1094 938 981 133 7 0 chr5 87964459 87964594 -115120938 - AluSq/x SINE Alu -176 136 1 919 274 79 12 chr5 87964604 87964933 -115120599 - HAL1b LINE L1 -447 901 551 14562 92 1 0 chr5 87965037 87967801 -115117731 + L1PA7 LINE L1 3384 6153 -1 4269 166 27 21 chr5 87967801 87967852 -115117680 + L1MB7 LINE L1 5275 5324 -860 10799 152 10 0 chr5 87967852 87970576 -115114956 + L1PA13 LINE L1 3457 6149 -14 4269 166 27 21 chr5 87970576 87971375 -115114157 + L1MB7 LINE L1 5324 6130 -54 268 269 37 0 chr5 87971438 87971546 -115113986 - L1ME4a LINE L1 -44 6077 5966 261 313 45 0 chr5 87971599 87971733 -115113799 - HAL1 LINE L1 -651 1856 1717 1141 253 132 92 chr5 87971797 87972815 -115112717 - HAL1 LINE L1 -637 1870 786 2450 164 31 2 chr5 87972815 87973229 -115112303 + MSTB LTR MaLR 1 426 0 1141 253 132 92 chr5 87973229 87973521 -115112011 - HAL1 LINE L1 -1721 786 507 240 233 0 33 chr5 87973529 87973589 -115111943 - HAL1 LINE L1 -2189 318 261 282 211 63 42 chr5 87973747 87973842 -115111690 + LTR37B LTR ERV1 6 102 -366 549 196 127 65 chr5 87973951 87974196 -115111336 + LTR37B LTR ERV1 209 468 0 1604 191 71 37 chr5 87974199 87974549 -115110983 - MSTD LTR MaLR 0 396 35 1253 166 81 15 chr5 87975023 87975282 -115110250 - AluJb SINE Alu -36 276 1 1516 196 132 22 chr5 87977929 87978286 -115107246 + MSTD LTR MaLR 1 396 0 945 127 0 0 chr5 87978523 87978649 -115106883 - FLAM_C SINE Alu -17 126 1 2347 63 0 7 chr5 87979041 87979348 -115106184 - AluY SINE Alu 0 305 1 2186 90 0 3 chr5 87979790 87980078 -115105454 + AluSc SINE Alu 19 305 -4 1596 171 20 20 chr5 87980166 87980459 -115105073 + AluJo SINE Alu 1 293 -19 305 258 0 0 chr5 87980689 87980755 -115104777 - L2 LINE L2 0 3272 3207 2001 135 21 0 chr5 87980887 87981176 -115104356 + AluSx SINE Alu 1 295 -17 321 279 39 10 chr5 87981455 87981559 -115103973 + Charlie8 DNA MER1_type 85 191 -2226 4080 96 85 19 chr5 87981719 87982345 -115103187 + PABL_B LTR ERV1 1 667 0 2757 159 34 47 chr5 87982545 87983079 -115102453 + MER68 LTR ERV1 1 527 -35 821 242 142 78 chr5 87983529 87983713 -115101819 + MLT1J LTR MaLR 23 194 -317 2014 100 93 0 chr5 87983713 87983983 -115101549 - AluSc SINE Alu -14 295 1 821 242 142 78 chr5 87983983 87984248 -115101284 + MLT1J LTR MaLR 194 501 -10 463 315 19 6 chr5 87984302 87984464 -115101068 - MIR3 SINE MIR 0 208 45 2099 148 0 0 chr5 87984589 87984892 -115100640 + AluJb SINE Alu 9 311 -1 249 248 89 40 chr5 87985116 87985217 -115100315 - MER91A DNA MER1_type -73 123 18 466 256 139 10 chr5 87985389 87985716 -115099816 + LTR16C LTR ERVL 83 478 -13 1815 148 21 7 chr5 87985838 87986129 -115099403 + AluJo SINE Alu 1 295 -17 2388 92 0 13 chr5 87986506 87986820 -115098712 + AluSg SINE Alu 1 310 0 397 296 42 0 chr5 87987029 87987171 -115098361 - L3 LINE CR1 -56 1521 1374 1035 163 0 24 chr5 87987230 87987396 -115098136 + FRAM SINE Alu 1 157 -19 556 199 6 77 chr5 87987407 87987563 -115097969 - MIR SINE MIR -52 210 66 2137 135 3 0 chr5 87987892 87988188 -115097344 - AluSx SINE Alu -15 297 1 320 280 84 74 chr5 87988205 87988330 -115097202 + L1ME LINE L1 5381 5503 -618 1630 172 39 0 chr5 87988330 87988609 -115096923 + AluJb SINE Alu 1 290 -22 320 280 84 74 chr5 87988609 87988901 -115096631 + L1ME LINE L1 5503 5802 -319 251 221 126 21 chr5 87989002 87989097 -115096435 + HAL1 LINE L1 787 891 -1616 2102 126 3 3 chr5 87989237 87989531 -115096001 + AluSx SINE Alu 1 294 -18 618 249 5 22 chr5 87989536 87989721 -115095811 + AluJb SINE Alu 130 311 -1 2354 57 7 34 chr5 87989938 87990236 -115095296 - AluY SINE Alu -21 290 1 241 0 0 0 chr5 87990753 87990782 -115094750 - Alu SINE Alu -110 191 163 252 338 123 31 chr5 87990983 87991155 -115094377 - L2 LINE L2 -1106 2208 2053 2423 98 0 0 chr5 87991155 87991462 -115094070 + AluSx SINE Alu 1 307 -5 252 338 123 31 chr5 87991462 87991736 -115093796 - L2 LINE L2 -1261 2053 1721 626 196 0 0 chr5 87991738 87991845 -115093687 - FLAM_A SINE Alu -35 107 1 1866 158 16 10 chr5 87991993 87992303 -115093229 - AluJb SINE Alu 0 312 1 592 238 16 42 chr5 87992526 87992719 -115092813 - MLT1L LTR MaLR -221 394 207 1238 203 136 3 chr5 87993139 87993440 -115092092 + MER58B DNA MER1_type 1 341 0 389 282 107 27 chr5 87994892 87995041 -115090491 - MIR SINE MIR -100 162 2 465 145 99 105 chr5 87995320 87995472 -115090060 + MIR SINE MIR 23 173 -89 306 296 72 75 chr5 87995589 87995827 -115089705 + MIR SINE MIR 6 234 -28 1605 165 44 92 chr5 87995859 87996313 -115089219 + MSTB1 LTR MaLR 1 432 0 513 345 80 45 chr5 87997559 87998008 -115087524 + L1MEd LINE L1 10 474 -5645 1054 191 78 99 chr5 87998102 87998396 -115087136 + AluJo SINE Alu 1 288 -14 968 172 81 0 chr5 87998497 87998706 -115086826 - Charlie1 DNA MER1_type -193 2568 2343 412 200 0 0 chr5 87998705 87998775 -115086757 - Charlie1 DNA MER1_type -2691 70 1 * 21 0 0 0 chr5 87998983 87999004 -115086528 + AT_rich Low_complexity Low_complexity 1 21 0 2267 67 3 7 chr5 87999408 87999726 -115085806 - AluY SINE Alu 0 318 2 478 304 52 48 chr5 88000321 88000779 -115084753 - L1MC4 LINE L1 -140 7902 7443 779 270 90 43 chr5 88000893 88001224 -115084308 + L1MEd LINE L1 577 891 -5419 2425 98 0 0 chr5 88001224 88001529 -115084003 + AluSq SINE Alu 1 305 -8 779 270 90 43 chr5 88001529 88002200 -115083332 + L1MEd LINE L1 891 1670 -4640 24 0 0 0 chr5 88002438 88002462 -115083070 + AT_rich Low_complexity Low_complexity 1 24 0 229 250 17 17 chr5 88005041 88005101 -115080431 - MIR SINE MIR -133 75 16 766 270 66 21 chr5 88006041 88006282 -115079250 - MIR SINE MIR -6 256 5 2142 109 3 0 chr5 88006479 88006804 -115078728 + AluSx SINE Alu 1 326 0 277 128 11 170 chr5 88007268 88007362 -115078170 - MER69 DNA AcHobo -2447 79 1 22 35 0 0 chr5 88007747 88007776 -115077756 + AT_rich Low_complexity Low_complexity 1 29 0 705 124 0 16 chr5 88007776 88007897 -115077635 - L1PA15 LINE L1 -3 6162 6044 186 133 0 0 chr5 88008011 88008041 -115077491 + (T)n Simple_repeat Simple_repeat 1 30 0 287 234 65 37 chr5 88008476 88008583 -115076949 + MLT1J LTR MaLR 74 183 -328 2294 113 48 20 chr5 88008590 88008944 -115076588 - THE1B LTR MaLR 0 364 1 877 265 10 8 chr5 88009016 88009331 -115076201 + LTR16A LTR ERVL 97 450 0 237 200 24 164 chr5 88009445 88009610 -115075922 + MLT1J LTR MaLR 326 467 -44 256 308 0 0 chr5 88009675 88009740 -115075792 - L2 LINE L2 -496 2818 2754 1388 156 40 40 chr5 88009817 88010067 -115075465 - AluJo SINE Alu -62 250 1 1062 146 61 33 chr5 88011062 88011275 -115074257 + MER20 DNA MER1_type 1 219 0 567 75 0 25 chr5 88011425 88011505 -115074027 + Alu SINE Alu 223 300 -12 385 148 0 37 chr5 88011541 88011622 -115073910 + MER53 DNA DNA 112 189 0 639 241 0 8 chr5 88012855 88012988 -115072544 + L2 LINE L2 3181 3312 -1 771 207 0 0 chr5 88013020 88013170 -115072362 - L1PB4 LINE L1 -2 6154 6005 1821 101 98 49 chr5 88013363 88013710 -115071822 - THE1B LTR MaLR 0 364 1 2434 86 0 3 chr5 88013853 88014155 -115071377 + AluSc SINE Alu 1 301 -8 233 287 139 31 chr5 88014270 88014399 -115071133 - MIR3 SINE MIR -60 148 6 2330 110 0 0 chr5 88014880 88015190 -115070342 + AluSx SINE Alu 1 310 -2 204 321 0 24 chr5 88016521 88016605 -115068927 + CT-rich Low_complexity Low_complexity 1 82 0 200 222 0 0 chr5 88017129 88017174 -115068358 + T-rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 88019769 88019790 -115065742 + AT_rich Low_complexity Low_complexity 1 21 0 494 222 140 0 chr5 88021183 88021354 -115064178 - L1MD2 LINE L1 -2 6357 6163 1983 149 138 5 chr5 88021409 88021785 -115063747 - MSTA LTR MaLR -2 426 1 541 142 55 8 chr5 88021827 88021954 -115063578 - L1M4 LINE L1 -831 5315 5183 1673 211 65 59 chr5 88021954 88022511 -115063021 - L1MDa LINE L1 -3184 3356 2750 189 107 0 0 chr5 88022511 88022539 -115062993 + (CA)n Simple_repeat Simple_repeat 2 29 0 1673 211 65 59 chr5 88022539 88023026 -115062506 - L1MDa LINE L1 -3790 2750 2267 1889 131 6 42 chr5 88023763 88024075 -115061457 - AluSx SINE Alu -11 301 1 1346 145 47 9 chr5 88025152 88025366 -115060166 - AluJb SINE Alu -71 241 20 596 309 87 52 chr5 88025558 88025810 -115059722 + MIR SINE MIR 2 262 0 287 348 70 9 chr5 88025863 88025978 -115059554 - MIR SINE MIR -68 140 19 310 342 67 17 chr5 88027182 88027302 -115058230 + L2 LINE L2 3132 3257 -15 931 202 23 0 chr5 88027793 88027966 -115057566 - MER45A DNA AcHobo 0 178 2 193 200 0 0 chr5 88028284 88028319 -115057213 - L2 LINE L2 -16 3256 3222 26 0 0 0 chr5 88029814 88029840 -115055692 + AT_rich Low_complexity Low_complexity 1 26 0 201 293 35 0 chr5 88030457 88030515 -115055017 - MIR SINE MIR -10 252 193 529 186 0 0 chr5 88031021 88031107 -115054425 - L2 LINE L2 0 3313 3228 2216 116 3 3 chr5 88031801 88032111 -115053421 + AluSq SINE Alu 1 310 -3 2285 105 3 3 chr5 88032455 88032759 -115052773 - AluSq SINE Alu -9 304 1 327 352 48 14 chr5 88033678 88033823 -115051709 + MER5A DNA MER1_type 2 151 -38 2409 77 0 0 chr5 88034636 88034946 -115050586 + AluY SINE Alu 1 310 -1 524 296 46 31 chr5 88035575 88035771 -115049761 + MIR SINE MIR 8 206 -56 201 39 0 0 chr5 88037771 88037797 -115047735 + (TG)n Simple_repeat Simple_repeat 2 27 0 64 14 0 0 chr5 88038108 88038179 -115047353 + AT_rich Low_complexity Low_complexity 1 71 0 2288 97 0 7 chr5 88038729 88039028 -115046504 - AluSq SINE Alu -16 297 1 334 210 25 0 chr5 88039860 88039941 -115045591 + L1MD1 LINE L1 6145 6227 -15 628 178 92 26 chr5 88041154 88041306 -115044226 + MER103 DNA DNA 2 163 -3 2216 115 0 3 chr5 88041306 88041610 -115043922 - AluSq SINE Alu -10 303 1 2157 88 0 85 chr5 88043329 88043658 -115041874 - AluSq SINE Alu -12 301 1 297 127 0 36 chr5 88044061 88044116 -115041416 - L1ME2 LINE L1 0 6164 6112 320 272 19 0 chr5 88046074 88046177 -115039355 - L2 LINE L2 -401 2912 2808 534 242 123 16 chr5 88046828 88047080 -115038452 - L1ME4a LINE L1 -111 6010 5732 382 332 64 16 chr5 88047094 88047344 -115038188 - L1ME4a LINE L1 -2215 5593 5332 212 308 0 0 chr5 88047355 88047407 -115038125 + MIR SINE MIR 95 146 -62 313 266 119 0 chr5 88047495 88047604 -115037928 + L2 LINE L2 3151 3272 0 2202 125 0 0 chr5 88047939 88048242 -115037290 - AluSx SINE Alu -9 303 1 292 289 72 65 chr5 88048344 88048621 -115036911 + L3 LINE CR1 566 844 -733 3390 246 124 15 chr5 88049778 88051160 -115034372 - L2 LINE L2 -3 3310 1798 269 387 61 14 chr5 88051977 88052189 -115033343 + L2 LINE L2 2599 2820 -494 629 283 105 33 chr5 88052491 88052852 -115032680 + L2 LINE L2 2093 2479 -835 1111 230 18 5 chr5 88052874 88053096 -115032436 - MIR SINE MIR -37 225 1 446 207 41 58 chr5 88053460 88053581 -115031951 + L2 LINE L2 3195 3313 0 264 164 45 15 chr5 88053835 88053902 -115031630 + MLT1K LTR MaLR 188 256 -332 288 351 24 18 chr5 88054119 88054284 -115031248 - L2 LINE L2 -171 3101 2936 328 291 188 55 chr5 88054339 88054410 -115031122 - L2 LINE L2 -501 2813 2753 2099 92 3 51 chr5 88054410 88054726 -115030806 - AluSx SINE Alu 0 302 1 328 291 188 55 chr5 88054726 88054983 -115030549 - L2 LINE L2 -561 2753 2440 659 307 114 9 chr5 88054998 88055314 -115030218 - L2 LINE L2 -1002 2312 1964 203 0 0 36 chr5 88057200 88057228 -115028304 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 314 324 9 19 chr5 88058432 88058540 -115026992 + MIR SINE MIR 47 153 -109 215 351 13 0 chr5 88059498 88059575 -115025957 - MIR SINE MIR -108 100 23 2959 136 14 0 chr5 88060301 88060729 -115024803 - MER57B LTR ERV1 0 434 1 2081 150 31 13 chr5 88061005 88061359 -115024173 - MLT1A1 LTR MaLR 0 365 1 342 0 0 0 chr5 88062085 88062123 -115023409 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 556 279 60 6 chr5 88062688 88062871 -115022661 + MER117 DNA MER1_type 2 194 -3 254 182 146 55 chr5 88065009 88065119 -115020413 - L1M LINE L1 -880 5417 5298 914 187 136 5 chr5 88065137 88065335 -115020197 + MER58A DNA MER1_type 1 224 0 3629 149 41 69 chr5 88066067 88066778 -115018754 - LTR8 LTR ERV1 0 691 1 825 254 64 50 chr5 88066947 88067368 -115018164 - HAL1b LINE L1 -782 566 140 281 233 0 56 chr5 88067765 88067855 -115017677 - L1ME LINE L1 -303 5818 5734 572 155 112 126 chr5 88067890 88067998 -115017534 + L1M4 LINE L1 4468 4573 -1573 1636 166 0 21 chr5 88067998 88068316 -115017216 + AluJb SINE Alu 11 312 0 572 155 112 126 chr5 88068316 88068413 -115017119 + L1M4 LINE L1 4573 4670 -1476 331 225 21 89 chr5 88068411 88068577 -115016955 - L1M4 LINE L1 -4872 1670 1516 * 519 17 0 0 chr5 88068862 88068922 -115016610 + (TG)n Simple_repeat Simple_repeat 2 61 0 3684 111 17 9 chr5 88068986 88069520 -115016012 + L1MA3 LINE L1 5768 6305 0 23 33 0 0 chr5 88069520 88069550 -115015982 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 88069600 88069628 -115015904 + AT_rich Low_complexity Low_complexity 1 28 0 4614 129 75 49 chr5 88070340 88071210 -115014322 + MER4D LTR ERV1 1 892 -11 261 260 58 91 chr5 88071893 88072047 -115013485 + LTR50 LTR ERVL 28 176 -619 1089 254 116 6 chr5 88072455 88072774 -115012758 - MLT1H LTR MaLR -195 354 1 265 314 8 8 chr5 88072788 88072906 -115012626 + LTR33A LTR ERVL 404 521 -2 446 194 103 84 chr5 88072909 88072930 -115012602 + L2 LINE L2 3156 3175 -138 2724 228 45 34 chr5 88072930 88073549 -115011983 - MLT1E2 LTR MaLR 0 626 1 446 194 103 84 chr5 88073549 88073682 -115011850 + L2 LINE L2 3175 3313 0 182 163 75 100 chr5 88073734 88073814 -115011718 + MIR SINE MIR 107 184 -78 1433 198 8 0 chr5 88073825 88074062 -115011470 - MER8 DNA MER2_type 0 239 1 478 187 11 0 chr5 88074618 88074709 -115010823 - MER33 DNA MER1_type 0 324 233 682 267 68 0 chr5 88075745 88075906 -115009626 + FAM SINE Alu 1 172 -3 917 147 103 0 chr5 88075910 88076094 -115009438 - MER33 DNA MER1_type -76 248 46 960 287 76 36 chr5 88076556 88076977 -115008555 - MER115 DNA AcHobo -252 441 4 1522 267 60 74 chr5 88077370 88078071 -115007461 - MER21B LTR ERV1 -149 714 24 184 143 0 0 chr5 88079243 88079271 -115006261 - L2 LINE L2 -14 3258 3231 211 154 0 0 chr5 88080341 88080380 -115005152 - L2 LINE L2 0 3313 3275 591 338 57 14 chr5 88080635 88080931 -115004601 + L2 LINE L2 2218 2526 -788 332 344 73 46 chr5 88081616 88081875 -115003657 + L2 LINE L2 2556 2821 -493 480 279 94 21 chr5 88082020 88082253 -115003279 - L1MC4 LINE L1 0 8042 7793 2578 169 43 31 chr5 88082253 88082763 -115002769 + L1M4c LINE L1 102 617 -5767 503 293 176 70 chr5 88082874 88083498 -115002034 - L2 LINE L2 -545 2769 2080 289 298 24 12 chr5 88083630 88083714 -115001818 + LTR67 LTR ERVL 110 194 -363 2275 87 3 0 chr5 88084023 88084309 -115001223 - AluSg SINE Alu -8 302 16 366 295 39 51 chr5 88084348 88084504 -115001028 - L2 LINE L2 -1293 2021 1868 274 341 0 0 chr5 88084605 88084693 -115000839 + MIR SINE MIR 37 124 -84 473 284 81 96 chr5 88085444 88085741 -114999791 + L2 LINE L2 2080 2380 -934 3290 32 0 11 chr5 88085741 88086120 -114999412 + L1PA5 LINE L1 5773 6147 -7 473 284 81 96 chr5 88086120 88086413 -114999119 + L2 LINE L2 2380 2718 -596 217 264 57 0 chr5 88087307 88087360 -114998172 - MIR SINE MIR -102 160 105 289 309 24 16 chr5 88088229 88088355 -114997177 + L2 LINE L2 3182 3308 -5 1037 87 0 0 chr5 88088415 88088541 -114996991 + AluSq/x SINE Alu 1 126 -187 330 26 0 0 chr5 88088541 88088580 -114996952 + (CA)n Simple_repeat Simple_repeat 2 40 0 756 306 79 41 chr5 88089441 88089833 -114995699 - L2 LINE L2 0 3272 2866 22 0 0 0 chr5 88090314 88090336 -114995196 + AT_rich Low_complexity Low_complexity 1 22 0 718 288 48 28 chr5 88090941 88091299 -114994233 - LTR16B LTR ERVL -99 365 1 533 259 184 24 chr5 88091317 88091572 -114993960 + L2 LINE L2 2977 3272 0 327 322 178 0 chr5 88092629 88092831 -114992701 + MIR SINE MIR 25 262 0 643 299 43 5 chr5 88092842 88093049 -114992483 + MIR SINE MIR 47 261 -1 1853 179 59 65 chr5 88095932 88096141 -114989391 + MLT1D LTR MaLR 1 210 -295 2156 94 7 0 chr5 88096141 88096427 -114989105 + AluSx SINE Alu 7 294 -18 1853 179 59 65 chr5 88096427 88096725 -114988807 + MLT1D LTR MaLR 210 505 0 296 350 207 12 chr5 88097064 88097310 -114988222 + L2 LINE L2 2553 2846 -468 2302 176 81 5 chr5 88097449 88097880 -114987652 + MLT1C LTR MaLR 1 464 -3 1169 236 16 12 chr5 88098965 88099211 -114986321 - MIR SINE MIR -13 249 3 271 235 0 106 chr5 88099787 88099867 -114985665 - MIR SINE MIR -117 145 75 274 256 22 109 chr5 88099867 88100004 -114985528 - MER5B DNA MER1_type -1 177 53 1541 173 37 3 chr5 88100189 88100484 -114985048 + AluJb SINE Alu 1 305 -7 195 256 0 0 chr5 88100659 88100702 -114984830 + L2 LINE L2 3217 3259 -13 243 361 58 13 chr5 88101121 88101276 -114984256 + L1MEd LINE L1 246 407 -5712 376 338 60 30 chr5 88101498 88101764 -114983768 + L1MEd LINE L1 648 921 -5198 852 324 90 29 chr5 88101851 88102372 -114983160 + L1M4 LINE L1 4313 4865 -1281 3451 260 81 23 chr5 88102424 88104183 -114981349 + L1MEd LINE L1 965 2808 -3321 637 247 100 82 chr5 88104203 88104753 -114980779 + L1MDa LINE L1 1942 2501 -4039 1809 202 135 21 chr5 88104778 88105117 -114980415 + L1MDa LINE L1 2655 3077 -3463 2076 87 35 3 chr5 88105117 88105404 -114980128 - AluSq SINE Alu -17 296 1 1809 202 135 21 chr5 88105404 88105589 -114979943 + L1MDa LINE L1 3077 3239 -3301 375 259 80 0 chr5 88106220 88106332 -114979200 + MIR SINE MIR 77 197 -65 440 266 108 46 chr5 88106591 88106958 -114978574 + MLT1J2 LTR MaLR 64 443 -7 335 320 193 6 chr5 88106979 88107160 -114978372 + MIR SINE MIR 48 262 0 272 257 104 77 chr5 88108054 88108237 -114977295 - MER5A DNA MER1_type -1 188 1 2161 107 3 3 chr5 88108420 88108730 -114976802 - AluSx SINE Alu -2 310 1 233 319 19 89 chr5 88109183 88109440 -114976092 + L2 LINE L2 2813 3051 -221 234 288 113 51 chr5 88109709 88109983 -114975549 + L2 LINE L2 1754 2044 -1270 496 231 44 74 chr5 88109983 88110186 -114975346 + MLT1K LTR MaLR 30 226 -362 628 239 126 17 chr5 88110232 88110462 -114975070 + MLT1K LTR MaLR 331 585 -3 908 308 88 36 chr5 88111753 88112308 -114973224 + L3 LINE CR1 819 1402 -175 1038 257 124 16 chr5 88112509 88112937 -114972595 + MLT1K LTR MaLR 3 476 0 269 269 0 15 chr5 88113323 88113390 -114972142 + GA-rich Low_complexity Low_complexity 4 69 0 21 36 0 0 chr5 88113897 88113925 -114971607 + AT_rich Low_complexity Low_complexity 1 28 0 231 393 30 22 chr5 88114152 88114287 -114971245 - L2 LINE L2 -15 3257 3122 444 249 59 47 chr5 88114318 88114487 -114971045 + MER5B DNA MER1_type 2 172 -6 210 37 0 0 chr5 88116359 88116386 -114969146 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1700 161 7 7 chr5 88116444 88116743 -114968789 - AluSx SINE Alu -13 299 1 194 304 196 0 chr5 88116889 88116981 -114968551 + L2 LINE L2 1958 2067 -1247 1923 60 102 0 chr5 88117403 88117669 -114967863 + AluY SINE Alu 17 309 -2 626 205 56 0 chr5 88118128 88118289 -114967243 - MER5B DNA MER1_type -4 174 5 1994 126 0 10 chr5 88118784 88119077 -114966455 - AluSx SINE Alu -17 295 6 275 253 125 60 chr5 88119183 88119340 -114966192 + MIR3 SINE MIR 3 168 -62 295 336 15 15 chr5 88120112 88120243 -114965289 - MER117 DNA MER1_type 0 197 67 22 56 0 0 chr5 88121370 88121406 -114964126 + AT_rich Low_complexity Low_complexity 1 36 0 222 381 56 6 chr5 88122509 88122669 -114962863 + L2 LINE L2 3096 3263 -9 517 252 9 0 chr5 88122687 88122794 -114962738 - MER81 DNA DNA -5 109 2 242 365 65 0 chr5 88123018 88123125 -114962407 - L2 LINE L2 -4 3268 3155 236 263 105 11 chr5 88124417 88124512 -114961020 - L2 LINE L2 -176 3096 2993 541 256 178 41 chr5 88126142 88126361 -114959171 - MIR SINE MIR 0 262 14 2217 82 0 52 chr5 88126673 88127001 -114958531 + AluY SINE Alu 1 311 0 273 313 50 0 chr5 88128046 88128126 -114957406 + MIR3 SINE MIR 77 160 -48 5415 156 12 21 chr5 88128133 88128444 -114957088 + MER49 LTR ERV1 1 313 -610 1836 149 0 0 chr5 88128444 88128732 -114956800 + AluJb SINE Alu 11 298 -14 5415 156 12 21 chr5 88128732 88129318 -114956214 + MER49 LTR ERV1 313 890 -33 775 134 0 63 chr5 88129329 88129471 -114956061 - FLAM_C SINE Alu 0 133 1 762 164 19 122 chr5 88129620 88129756 -114955776 + MIR SINE MIR 28 136 -126 2411 64 0 3 chr5 88129756 88130068 -114955464 + AluY SINE Alu 1 311 0 762 164 19 122 chr5 88130068 88130145 -114955387 + MIR SINE MIR 136 219 -43 736 204 43 19 chr5 88131555 88131717 -114953815 + MER3 DNA MER1_type 10 128 -81 300 283 10 10 chr5 88132123 88132222 -114953310 + MER117 DNA MER1_type 71 169 -28 192 382 0 0 chr5 88132723 88132791 -114952741 - MIR SINE MIR -65 143 76 1304 194 0 0 chr5 88133115 88133331 -114952201 + MLT1A1 LTR MaLR 150 365 0 201 74 0 0 chr5 88134999 88135026 -114950506 + (T)n Simple_repeat Simple_repeat 1 27 0 303 307 79 10 chr5 88137112 88137314 -114948218 + L1ME4a LINE L1 5655 5870 -251 305 253 12 24 chr5 88138773 88138856 -114946676 + MER5A DNA MER1_type 87 168 -21 609 154 98 24 chr5 88139034 88139157 -114946375 - FLAM_C SINE Alu -1 132 1 461 286 128 47 chr5 88139207 88139567 -114945965 - L2 LINE L2 -337 2977 2589 21 0 0 0 chr5 88139664 88139685 -114945847 + AT_rich Low_complexity Low_complexity 1 21 0 824 137 25 14 chr5 88139756 88140014 -114945518 + CT-rich Low_complexity Low_complexity 1 260 0 641 231 0 0 chr5 88140017 88140134 -114945398 - FRAM SINE Alu -52 124 8 2009 109 0 3 chr5 88140188 88140502 -114945030 + AluSx SINE Alu 1 313 0 466 150 0 0 chr5 88141959 88142039 -114943493 + L1ME LINE L1 5395 5474 -690 348 83 0 0 chr5 88142243 88142291 -114943241 + (CA)n Simple_repeat Simple_repeat 1 48 0 1675 172 20 14 chr5 88142470 88142766 -114942766 + AluJo SINE Alu 1 298 -14 3413 215 76 26 chr5 88142832 88143260 -114942272 + L1ME1 LINE L1 4736 5141 -1025 1960 132 34 14 chr5 88143260 88143556 -114941976 + AluJb SINE Alu 1 302 -10 3413 215 76 26 chr5 88143556 88144504 -114941028 + L1ME1 LINE L1 5141 6165 -1 408 217 83 58 chr5 88145310 88145376 -114940156 + MER94 DNA DNA 11 83 -51 2377 124 40 17 chr5 88145376 88145730 -114939802 - THE1B LTR MaLR 0 364 3 408 217 83 58 chr5 88145730 88145783 -114939749 + MER94 DNA DNA 83 133 -1 25 0 0 0 chr5 88145941 88145966 -114939566 + AT_rich Low_complexity Low_complexity 1 25 0 1944 153 0 19 chr5 88146092 88146229 -114939303 + AluJo SINE Alu 1 139 -173 2022 82 48 38 chr5 88146229 88146521 -114939011 + AluSc SINE Alu 1 295 -14 1944 153 0 19 chr5 88146521 88146690 -114938842 + AluJo SINE Alu 139 301 -11 1783 124 11 19 chr5 88146721 88146986 -114938546 + THE1B LTR MaLR 1 263 -101 1413 119 5 5 chr5 88146981 88147183 -114938349 + THE1B LTR MaLR 163 364 0 * 1045 270 106 46 chr5 88147304 88147778 -114937754 - L1ME3 LINE L1 -224 5938 5437 676 279 54 9 chr5 88147775 88147997 -114937535 + L1MC4 LINE L1 7354 7585 -457 * 2319 77 11 0 chr5 88148038 88148362 -114937170 + AluSq SINE Alu 1 327 0 928 211 78 37 chr5 88148362 88148604 -114936928 + L1MC4 LINE L1 7570 7821 -221 253 294 98 37 chr5 88148640 88148803 -114936729 - L1ME3 LINE L1 -1198 4948 4776 547 119 0 79 chr5 88149202 88149303 -114936229 + MER5A DNA MER1_type 9 101 -88 1261 234 22 89 chr5 88149440 88149811 -114935721 + MLT1I LTR MaLR 60 405 -4 371 118 0 15 chr5 88150218 88150286 -114935246 + (GGAGA)n Simple_repeat Simple_repeat 2 68 0 24 0 0 0 chr5 88151326 88151350 -114934182 + AT_rich Low_complexity Low_complexity 1 24 0 891 244 47 22 chr5 88151438 88151712 -114933820 + L1ME4a LINE L1 5575 5855 -266 3234 228 49 42 chr5 88151811 88153113 -114932419 + L1ME3A LINE L1 4855 6166 -4 527 278 46 50 chr5 88153117 88153358 -114932174 - MLT1J LTR MaLR -52 459 220 644 246 29 71 chr5 88154928 88155175 -114930357 - MIR SINE MIR -1 261 28 297 261 138 14 chr5 88156339 88156546 -114928986 + HAL1b LINE L1 1216 1319 -29 233 212 15 61 chr5 88156718 88156784 -114928748 - MIR SINE MIR -32 230 168 679 215 39 44 chr5 88156787 88156992 -114928540 + L2 LINE L2 3109 3312 -1 423 68 0 34 chr5 88156997 88157056 -114928476 - MSTD LTR MaLR 0 457 401 102 36 0 0 chr5 88157059 88157196 -114928336 + AT_rich Low_complexity Low_complexity 1 137 0 1824 205 12 0 chr5 88157199 88157521 -114928011 - MSTD LTR MaLR -70 326 1 275 297 80 15 chr5 88157523 88157655 -114927877 - MIR SINE MIR -63 145 19 340 303 0 10 chr5 88158545 88158644 -114926888 + (CA)n Simple_repeat Simple_repeat 1 98 0 730 291 32 12 chr5 88159159 88159488 -114926044 + L2 LINE L2 2751 3085 -228 834 175 0 0 chr5 88159507 88159650 -114925882 - FLAM_C SINE Alu 0 143 1 636 265 60 5 chr5 88159672 88159872 -114925660 + L2 LINE L2 3100 3310 -3 557 291 154 29 chr5 88161096 88161447 -114924085 - L3 LINE CR1 -1 1576 1182 436 154 0 0 chr5 88161934 88161999 -114923533 - AluJb SINE Alu -15 297 233 1062 154 6 12 chr5 88161999 88162168 -114923364 - AluJb SINE Alu -144 168 1 434 272 38 59 chr5 88163370 88163535 -114921997 + MIR SINE MIR 39 203 -59 473 205 160 60 chr5 88164381 88164581 -114920951 + LTR16C LTR ERVL 272 491 0 216 0 0 0 chr5 88164617 88164641 -114920891 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2070 130 0 3 chr5 88164929 88165229 -114920303 + AluSx SINE Alu 1 299 -13 259 294 49 56 chr5 88167089 88167232 -114918300 - L2 LINE L2 -4 3268 3127 293 214 0 0 chr5 88168128 88168184 -114917348 - MER3 DNA MER1_type -1 208 153 22 0 0 0 chr5 88168941 88168963 -114916569 + AT_rich Low_complexity Low_complexity 1 22 0 1312 202 4 4 chr5 88169148 88169396 -114916136 + AluJb SINE Alu 1 248 -64 438 248 0 20 chr5 88169413 88169514 -114916018 + L2 LINE L2 3210 3308 -5 580 163 252 0 chr5 88169521 88169644 -114915888 - MER3 DNA MER1_type -55 154 1 218 268 61 97 chr5 88171182 88171410 -114914122 - MIR SINE MIR -42 220 1 848 212 166 5 chr5 88171512 88171705 -114913827 - MER58A DNA MER1_type 0 224 1 269 298 48 0 chr5 88173525 88173609 -114911923 - L2 LINE L2 0 3272 3185 2290 98 24 0 chr5 88174114 88174409 -114911123 - AluSx SINE Alu -10 302 1 549 218 163 7 chr5 88175128 88175275 -114910257 + MER5A DNA MER1_type 14 183 -6 2263 92 3 3 chr5 88175279 88175573 -114909959 + AluSg SINE Alu 1 294 -16 231 152 22 0 chr5 88175947 88175993 -114909539 - L2 LINE L2 -2 3270 3224 2096 119 7 7 chr5 88176123 88176418 -114909114 + AluSx SINE Alu 1 295 -17 547 287 7 14 chr5 88176418 88176561 -114908971 + MER5B DNA MER1_type 33 174 -4 208 193 0 88 chr5 88178531 88178588 -114906944 - L2 LINE L2 -1 3312 3261 210 234 85 64 chr5 88179758 88179852 -114905680 + L3 LINE CR1 1219 1314 -263 738 312 98 38 chr5 88180080 88180906 -114904626 + L1MC4a LINE L1 4154 5029 -1117 44170 28 21 1 chr5 88180909 88186934 -114898598 + L1HS LINE L1 7 6154 -1 188 61 61 0 chr5 88186935 88186968 -114898564 + A-rich Low_complexity Low_complexity 1 35 0 240 35 0 0 chr5 88187007 88187036 -114898496 + (CA)n Simple_repeat Simple_repeat 2 30 0 1664 240 58 61 chr5 88187197 88187708 -114897824 + L1MC4a LINE L1 5254 5765 -356 2166 117 0 7 chr5 88187708 88188008 -114897524 - AluSg SINE Alu -12 298 1 1664 240 58 61 chr5 88188008 88188051 -114897481 + L1MC4a LINE L1 5765 5807 -314 2072 143 0 10 chr5 88188051 88188358 -114897174 - AluSq SINE Alu -9 304 1 1664 240 58 61 chr5 88188358 88188570 -114896962 + L1MC4a LINE L1 5807 6033 -88 210 333 32 11 chr5 88189221 88189314 -114896218 + MER5A DNA MER1_type 89 183 -6 576 141 0 12 chr5 88189650 88189735 -114895797 - AluJ/FLAM SINE Alu -216 96 13 294 29 0 0 chr5 88192123 88192158 -114893374 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 321 209 147 39 chr5 88192610 88192739 -114892793 - L2 LINE L2 0 3313 3171 327 231 172 45 chr5 88194030 88194164 -114891368 + MIR SINE MIR 35 185 -77 424 267 32 14 chr5 88194566 88194769 -114890763 + MIR SINE MIR 4 262 0 32978 102 15 56 chr5 88195122 88199449 -114886083 + L1PA7 LINE L1 12 3981 -2173 2055 120 3 13 chr5 88199449 88199757 -114885775 + AluSg SINE Alu 2 306 -4 32978 102 15 56 chr5 88199757 88201845 -114883687 + L1PA7 LINE L1 3981 6153 -1 415 345 60 83 chr5 88203429 88203826 -114881706 + L2 LINE L2 2879 3266 -6 2220 122 148 13 chr5 88205084 88205461 -114880071 + MSTA LTR MaLR 1 428 0 396 291 93 26 chr5 88205773 88205924 -114879608 + MIR SINE MIR 20 180 -82 210 154 0 0 chr5 88207257 88207296 -114878236 + T-rich Low_complexity Low_complexity 4 42 0 2239 110 3 0 chr5 88207298 88207597 -114877935 - AluSx SINE Alu -12 300 1 2236 106 0 7 chr5 88207599 88207900 -114877632 - AluSx SINE Alu -13 299 1 28 61 0 0 chr5 88208318 88208367 -114877165 + AT_rich Low_complexity Low_complexity 1 49 0 2313 89 0 10 chr5 88208636 88208938 -114876594 - AluSx SINE Alu -13 299 1 429 229 43 86 chr5 88209293 88209433 -114876099 + MIR SINE MIR 108 241 -21 2103 122 0 0 chr5 88210261 88210557 -114874975 + AluSx SINE Alu 1 296 -16 2093 156 44 6 chr5 88210768 88211195 -114874337 + L1MB3 LINE L1 5703 6183 0 427 243 84 42 chr5 88211298 88211512 -114874020 + MIR SINE MIR 27 249 -13 686 119 0 51 chr5 88212213 88212350 -114873182 - FLAM_A SINE Alu 0 142 31 341 167 106 0 chr5 88213638 88213704 -114871828 - L2 LINE L2 -6 3307 3235 680 287 220 0 chr5 88213898 88214212 -114871320 + L2 LINE L2 2929 3311 -2 249 319 63 39 chr5 88214387 88214594 -114870938 - L2 LINE L2 -220 3052 2841 1406 187 28 0 chr5 88215321 88215572 -114869960 - Tigger2 DNA MER2_type -10 2708 2451 4521 136 6 54 chr5 88215642 88216423 -114869109 - Tigger2 DNA MER2_type -1974 744 1 22 56 0 0 chr5 88217005 88217041 -114868491 + AT_rich Low_complexity Low_complexity 1 36 0 1595 145 0 4 chr5 88217049 88217291 -114868241 + AluSx SINE Alu 49 289 -23 447 19 0 0 chr5 88217292 88217344 -114868188 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 355 351 18 24 chr5 88217371 88217536 -114867996 - MER5A DNA MER1_type -5 184 21 640 199 99 0 chr5 88217572 88217703 -114867829 + MER5B DNA MER1_type 8 151 -27 277 159 32 0 chr5 88218752 88218815 -114866717 + GA-rich Low_complexity Low_complexity 2 66 0 216 0 0 0 chr5 88219269 88219293 -114866239 + (T)n Simple_repeat Simple_repeat 1 24 0 414 246 111 0 chr5 88221656 88221782 -114863750 + MIR SINE MIR 111 250 -12 240 328 189 28 chr5 88222833 88223220 -114862312 + L2 LINE L2 2804 3252 -20 24 32 0 0 chr5 88223403 88223434 -114862098 + AT_rich Low_complexity Low_complexity 1 31 0 1591 186 26 10 chr5 88223444 88223751 -114861781 + AluJo SINE Alu 1 312 0 609 184 0 20 chr5 88223751 88223903 -114861629 + GA-rich Low_complexity Low_complexity 2 150 0 417 309 138 11 chr5 88224531 88224719 -114860813 + MIR SINE MIR 2 213 -49 1648 168 3 34 chr5 88224720 88225018 -114860514 + AluJo SINE Alu 1 289 -23 279 211 0 0 chr5 88225123 88225180 -114860352 + MER2 DNA MER2_type 289 345 0 21 0 0 0 chr5 88225326 88225347 -114860185 + AT_rich Low_complexity Low_complexity 1 21 0 30 45 0 0 chr5 88235931 88235975 -114849557 + AT_rich Low_complexity Low_complexity 1 44 0 697 183 13 39 chr5 88236699 88236852 -114848680 + MIR SINE MIR 104 252 -10 387 209 75 123 chr5 88237425 88237612 -114847920 - MER5B DNA MER1_type 0 178 1 2571 72 0 0 chr5 88237616 88237923 -114847609 + AluSq SINE Alu 1 307 -6 1981 149 0 3 chr5 88238911 88239212 -114846320 - AluSx SINE Alu -12 300 1 3844 103 21 2 chr5 88239212 88239746 -114845786 - L1PA16 LINE L1 -11 6155 5612 1518 258 36 83 chr5 88240425 88240511 -114845021 - L1MDb LINE L1 -2157 4487 4399 2016 94 7 25 chr5 88240511 88240797 -114844735 - AluSq SINE Alu -32 281 1 1518 258 36 83 chr5 88240797 88241039 -114844493 - L1MDb LINE L1 -2245 4399 4147 1774 181 0 9 chr5 88241039 88241354 -114844178 - AluJo SINE Alu 0 312 1 2352 110 0 0 chr5 88241364 88241674 -114843858 - AluSg SINE Alu 0 310 1 1518 258 36 83 chr5 88241674 88242102 -114843430 - L1MDb LINE L1 -2506 4138 3755 2070 138 3 3 chr5 88242134 88242438 -114843094 - AluSx SINE Alu -8 304 1 1644 244 49 67 chr5 88242438 88243482 -114842050 - L1MDb LINE L1 -3074 3570 2587 514 174 0 64 chr5 88243488 88243597 -114841935 - FLAM_C SINE Alu -7 136 35 334 248 60 13 chr5 88243615 88243764 -114841768 - L1MDb LINE L1 -4233 2592 2437 670 265 79 41 chr5 88243911 88244097 -114841435 - L1MDb LINE L1 -4461 2183 2006 2320 106 3 0 chr5 88244097 88244399 -114841133 + AluSp SINE Alu 1 303 -10 670 265 79 41 chr5 88244399 88244780 -114840752 - L1MDb LINE L1 -4638 2006 1497 328 287 88 5 chr5 88244784 88244967 -114840565 - L1MDb LINE L1 -5073 1561 1355 2003 144 49 0 chr5 88245787 88246114 -114839418 - MER7A DNA MER2_type -4 342 2 191 410 64 60 chr5 88246905 88247188 -114838344 + L2 LINE L2 2902 3185 -87 257 221 15 59 chr5 88247481 88247549 -114837983 - L2 LINE L2 0 3313 3249 250 32 0 0 chr5 88248051 88248082 -114837450 - MADE1 DNA Mariner -45 35 5 240 217 0 0 chr5 88248847 88248893 -114836639 + MIR SINE MIR 36 81 -127 2447 54 0 0 chr5 88248932 88249226 -114836306 + AluY SINE Alu 1 294 -17 356 203 76 0 chr5 88249327 88249406 -114836126 - L2 LINE L2 -1 3312 3228 1978 151 0 19 chr5 88249779 88250097 -114835435 + AluJo SINE Alu 1 312 0 229 315 37 46 chr5 88250237 88250345 -114835187 - L2 LINE L2 -264 3008 2902 544 200 27 0 chr5 88251237 88251347 -114834185 - MER20 DNA MER1_type -57 162 50 1885 145 7 0 chr5 88252006 88252322 -114833210 + AluSx SINE Alu 1 318 0 260 205 77 8 chr5 88253816 88253933 -114831599 - L1ME4a LINE L1 -3 6118 5994 2395 138 37 66 chr5 88254069 88254530 -114831002 - Charlie1 DNA MER1_type 0 2761 2319 2282 109 3 13 chr5 88254530 88254843 -114830689 - AluSx SINE Alu -2 310 1 2395 138 37 66 chr5 88254843 88254953 -114830579 - Charlie1 DNA MER1_type -442 2319 2207 514 188 0 0 chr5 88254945 88255041 -114830491 - Charlie1 DNA MER1_type -2616 145 50 * 722 248 86 32 chr5 88255087 88255401 -114830131 - L1ME4a LINE L1 -304 5817 5487 31 26 0 0 chr5 88255537 88255575 -114829957 + AT_rich Low_complexity Low_complexity 1 38 0 1688 143 21 35 chr5 88255575 88255861 -114829671 - AluSg SINE Alu -28 282 1 2427 70 0 13 chr5 88255880 88256179 -114829353 - AluY SINE Alu -16 295 1 403 316 88 61 chr5 88256307 88256384 -114829148 + MIR SINE MIR 6 80 -182 1599 184 75 26 chr5 88256384 88256732 -114828800 + MLT1A1 LTR MaLR 1 365 0 403 316 88 61 chr5 88256732 88256882 -114828650 + MIR SINE MIR 80 239 -23 219 117 33 50 chr5 88257079 88257139 -114828393 + (TTCA)n Simple_repeat Simple_repeat 1 59 0 7238 48 26 0 chr5 88257644 88258518 -114827014 + MER11D LTR ERVK 1 897 0 187 258 155 26 chr5 88258582 88258750 -114826782 - MIR SINE MIR -28 234 43 2198 116 0 3 chr5 88259226 88259528 -114826004 - AluSg SINE Alu -9 301 1 348 83 0 0 chr5 88259792 88259840 -114825692 + (TC)n Simple_repeat Simple_repeat 1 48 0 1630 181 17 3 chr5 88260420 88260708 -114824824 - AluJo SINE Alu -20 292 1 3885 154 45 15 chr5 88261724 88262123 -114823409 - L1MB7 LINE L1 0 6184 5798 1461 166 113 19 chr5 88262123 88262388 -114823144 - AluJo SINE Alu -22 290 1 2023 93 82 0 chr5 88262392 88262671 -114822861 - AluY SINE Alu -9 302 1 3885 154 45 15 chr5 88262671 88263017 -114822515 - L1MB7 LINE L1 -388 5796 5462 2743 158 27 14 chr5 88263017 88263258 -114822274 - L1MA4 LINE L1 -2 6298 6062 195 42 0 0 chr5 88263258 88263282 -114822250 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1609 132 81 48 chr5 88263282 88263554 -114821978 - AluSx SINE Alu -31 281 1 2743 158 27 14 chr5 88263554 88263863 -114821669 - L1MA4 LINE L1 -237 6063 5740 3885 154 45 15 chr5 88263863 88264026 -114821506 - L1MB7 LINE L1 -722 5462 5275 733 268 191 60 chr5 88265281 88265301 -114820231 - L2 LINE L2 0 3313 3297 2145 131 0 3 chr5 88265301 88265632 -114819900 - AluSx SINE Alu 0 312 1 733 268 191 60 chr5 88265632 88266062 -114819470 - L2 LINE L2 -16 3297 2804 384 300 0 50 chr5 88266066 88266186 -114819346 - MIR SINE MIR -76 132 19 340 290 228 12 chr5 88266819 88266981 -114818551 + MIR SINE MIR 23 219 -43 261 227 31 82 chr5 88266991 88267088 -114818444 + MIR3 SINE MIR 90 181 -27 392 284 108 23 chr5 88267289 88267465 -114818067 + L2 LINE L2 3123 3313 0 2324 88 0 3 chr5 88267487 88267783 -114817749 - AluSq SINE Alu -18 295 1 294 296 41 20 chr5 88268781 88268879 -114816653 + L2 LINE L2 3138 3237 -35 1492 143 75 19 chr5 88268947 88269254 -114816278 + MER33 DNA MER1_type 1 324 0 256 294 0 47 chr5 88270114 88270199 -114815333 + L2 LINE L2 3228 3308 -5 1288 247 171 5 chr5 88270306 88270793 -114814739 + L2 LINE L2 2748 3313 0 383 258 77 71 chr5 88270797 88270864 -114814668 + MIR3 SINE MIR 24 89 -119 1899 157 0 10 chr5 88270864 88271170 -114814362 + AluJb SINE Alu 1 303 -9 383 258 77 71 chr5 88271170 88271284 -114814248 + MIR3 SINE MIR 89 206 -2 418 252 84 46 chr5 88271514 88271645 -114813887 + L2 LINE L2 3137 3272 0 461 290 95 6 chr5 88271767 88271936 -114813596 - MIR SINE MIR -6 256 73 2733 113 38 61 chr5 88272194 88272819 -114812713 + MER4B LTR ERV1 1 779 0 245 278 0 0 chr5 88274461 88274551 -114810981 + CT-rich Low_complexity Low_complexity 2 91 0 25 65 0 0 chr5 88274606 88274652 -114810880 + GC_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 88274722 88274751 -114810781 + GC_rich Low_complexity Low_complexity 1 29 0 236 332 78 24 chr5 88275032 88275237 -114810295 - MIR SINE MIR -19 243 28 2292 95 0 3 chr5 88275551 88275847 -114809685 - AluSx SINE Alu -17 295 1 1691 133 43 68 chr5 88276788 88277140 -114808392 - MER2 DNA MER2_type 0 344 2 22 0 0 0 chr5 88278240 88278262 -114807270 + AT_rich Low_complexity Low_complexity 1 22 0 1317 174 5 5 chr5 88279435 88279647 -114805885 - AluJb SINE Alu -16 296 85 1509 165 107 0 chr5 88279951 88280212 -114805320 + AluJb SINE Alu 1 289 -23 2768 6 0 28 chr5 88280554 88280873 -114804659 - AluYa5 SINE Alu -1 310 1 1171 179 52 79 chr5 88280968 88281164 -114804368 - AluJo SINE Alu 0 305 119 357 109 0 0 chr5 88281164 88281219 -114804313 + (TG)n Simple_repeat Simple_repeat 1 55 0 1171 179 52 79 chr5 88281219 88281335 -114804197 - AluJo SINE Alu -186 119 1 551 203 8 24 chr5 88281339 88281462 -114804070 - FRAM SINE Alu -9 167 47 1982 136 0 17 chr5 88281926 88282227 -114803305 + AluSq SINE Alu 5 300 -13 283 197 0 15 chr5 88282593 88282659 -114802873 + MER116 DNA Mariner 16 80 0 2534 75 0 0 chr5 88283049 88283460 -114802072 + AluSc SINE Alu 1 411 0 27 49 0 0 chr5 88284674 88284715 -114800817 + AT_rich Low_complexity Low_complexity 1 41 0 370 262 92 57 chr5 88285049 88285278 -114800254 + L2 LINE L2 3076 3312 -1 2297 110 0 0 chr5 88285303 88285611 -114799921 + AluSc SINE Alu 1 308 -1 1162 139 27 5 chr5 88286522 88286709 -114798823 + AluJb SINE Alu 112 302 -10 535 153 51 51 chr5 88287437 88287535 -114797997 - AluJb SINE Alu -24 288 191 1901 125 49 7 chr5 88287900 88288188 -114797344 - AluSx SINE Alu -12 300 1 249 224 0 0 chr5 88288316 88288374 -114797158 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 408 295 143 24 chr5 88288507 88288758 -114796774 + L2 LINE L2 2077 2357 -957 2127 277 154 24 chr5 88288774 88289734 -114795798 + L2 LINE L2 1028 2112 -1202 24 67 0 0 chr5 88289759 88289804 -114795728 + AT_rich Low_complexity Low_complexity 1 45 0 321 258 198 0 chr5 88289806 88289973 -114795559 - L1MC4 LINE L1 -79 7963 7764 302 255 99 21 chr5 88290023 88290083 -114795449 - L1MC4 LINE L1 -384 7658 7604 2082 97 0 63 chr5 88290083 88290402 -114795130 - AluSg SINE Alu -11 299 1 302 255 99 21 chr5 88290402 88290482 -114795050 - L1MC4 LINE L1 -438 7604 7507 883 240 52 13 chr5 88290565 88290794 -114794738 + L2 LINE L2 2108 2345 -969 6243 132 26 4 chr5 88290809 88292333 -114793199 + L1MA3 LINE L1 4747 6305 0 2051 147 0 0 chr5 88292384 88292684 -114792848 - AluJb SINE Alu -12 300 1 2323 111 0 13 chr5 88292796 88293111 -114792421 + AluSx SINE Alu 1 311 -1 330 315 210 18 chr5 88293546 88293765 -114791767 + MIR SINE MIR 2 262 0 2166 100 0 0 chr5 88293882 88294193 -114791339 + AluSg SINE Alu 1 311 0 352 324 97 22 chr5 88294218 88294265 -114791267 + MIR SINE MIR 8 50 -212 2167 99 34 0 chr5 88294265 88294558 -114790974 - AluSp SINE Alu -10 303 1 352 324 97 22 chr5 88294558 88294695 -114790837 + MIR SINE MIR 50 206 -56 222 37 0 0 chr5 88294749 88294776 -114790756 + (TTA)n Simple_repeat Simple_repeat 1 27 0 195 129 0 0 chr5 88295411 88295442 -114790090 + (CATA)n Simple_repeat Simple_repeat 2 32 0 27 29 0 0 chr5 88297118 88297152 -114788380 + AT_rich Low_complexity Low_complexity 1 34 0 446 127 0 0 chr5 88297633 88297696 -114787836 + AluJo SINE Alu 1 63 -249 802 149 84 164 chr5 88297876 88298138 -114787394 + AluJo SINE Alu 64 304 -8 2240 97 3 22 chr5 88298216 88298535 -114786997 + AluSq SINE Alu 1 313 0 391 325 131 0 chr5 88299539 88299699 -114785833 + MIR SINE MIR 5 185 -77 2248 95 0 3 chr5 88299894 88300190 -114785342 - AluSc SINE Alu -14 295 1 1040 182 210 7 chr5 88300299 88300585 -114784947 + MER2 DNA MER2_type 1 344 0 13911 113 46 53 chr5 88300593 88303029 -114782503 + Tigger1 DNA MER2_type 1 2418 0 4737 111 62 0 chr5 88303032 88303790 -114781742 - Tigger3b DNA MER2_type -153 1078 274 565 235 0 0 chr5 88303788 88303890 -114781642 - Tigger3b DNA MER2_type -1129 102 1 * 27 49 0 0 chr5 88304350 88304391 -114781141 + AT_rich Low_complexity Low_complexity 1 41 0 348 24 0 0 chr5 88304905 88304946 -114780586 + (TA)n Simple_repeat Simple_repeat 1 41 0 2411 80 0 0 chr5 88304946 88305245 -114780287 - AluSg1 SINE Alu -8 301 3 793 160 15 0 chr5 88306008 88306139 -114779393 + FLAM_C SINE Alu 1 133 0 1385 135 5 5 chr5 88309724 88309931 -114775601 - AluSg/x SINE Alu -19 291 85 2347 82 3 0 chr5 88310056 88310349 -114775183 - AluSq SINE Alu -19 294 1 384 291 35 28 chr5 88310542 88310683 -114774849 - MIR3 SINE MIR -10 198 57 1678 174 7 30 chr5 88310993 88311297 -114774235 - AluJo SINE Alu -15 297 1 26 0 0 0 chr5 88311516 88311542 -114773990 + AT_rich Low_complexity Low_complexity 1 26 0 783 296 70 10 chr5 88312157 88312471 -114773061 - L1ME4a LINE L1 -253 5868 5536 413 250 24 48 chr5 88314164 88314288 -114771244 + L2 LINE L2 3193 3313 0 23 33 0 0 chr5 88315882 88315912 -114769620 + AT_rich Low_complexity Low_complexity 1 30 0 860 219 0 18 chr5 88316172 88316336 -114769196 - FRAM SINE Alu -5 161 1 578 295 88 0 chr5 88317137 88317388 -114768144 + L1ME4a LINE L1 5596 5868 -253 1861 174 0 7 chr5 88317412 88317711 -114767821 + AluJo SINE Alu 1 297 -15 2970 215 35 8 chr5 88317993 88318617 -114766915 + MER82 DNA MER2_type 11 651 -2 246 182 91 0 chr5 88319902 88319979 -114765553 + (CATATA)n Simple_repeat Simple_repeat 4 87 0 2110 134 3 0 chr5 88320199 88320497 -114765035 + AluSx SINE Alu 1 299 -13 280 287 32 133 chr5 88320547 88320735 -114764797 + MIR3 SINE MIR 32 200 -8 187 405 70 38 chr5 88321245 88321403 -114764129 + L2 LINE L2 3108 3270 -2 1190 137 113 0 chr5 88322515 88322727 -114762805 + MER46A DNA MER2_type 1 236 0 23 0 0 0 chr5 88322797 88322820 -114762712 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 88323440 88323472 -114762060 + AT_rich Low_complexity Low_complexity 1 32 0 542 224 175 6 chr5 88323889 88324072 -114761460 + MER58C DNA MER1_type 1 214 -1 2147 121 3 0 chr5 88324209 88324506 -114761026 - AluSx SINE Alu -14 298 1 310 374 111 39 chr5 88324529 88325474 -114760058 + L2 LINE L2 635 1647 -1667 664 224 46 41 chr5 88326094 88326290 -114759242 + MER20 DNA MER1_type 22 218 -1 2091 122 3 10 chr5 88326370 88326674 -114758858 + AluSc SINE Alu 1 302 -7 1874 159 0 10 chr5 88326737 88327027 -114758505 + AluJb SINE Alu 1 287 -25 993 203 35 0 chr5 88327225 88327427 -114758105 - AluJb SINE Alu -18 294 86 1055 219 47 69 chr5 88327566 88328059 -114757473 + L1M4 LINE L1 4334 4815 -1331 261 189 128 92 chr5 88328056 88328252 -114757280 + L1MC5 LINE L1 7723 7925 -36 * 359 212 235 15 chr5 88328392 88328524 -114757008 + MER58C DNA MER1_type 55 215 0 2042 116 3 7 chr5 88328612 88328906 -114756626 + AluSx SINE Alu 1 293 -19 1768 115 17 17 chr5 88329863 88330159 -114755373 + L1MA8 LINE L1 5996 6291 0 331 280 48 48 chr5 88331110 88331235 -114754297 - MIR3 SINE MIR -51 157 33 1063 264 165 19 chr5 88331895 88332380 -114753152 - L2 LINE L2 -1 3312 2745 1191 238 139 27 chr5 88332395 88332761 -114752771 - L2 LINE L2 -800 2514 2108 457 254 152 42 chr5 88332864 88333081 -114752451 + LTR16A LTR ERVL 151 391 -66 301 298 142 7 chr5 88333132 88333273 -114752259 + MIR SINE MIR 85 244 -18 181 297 162 0 chr5 88333523 88333597 -114751935 + L2 LINE L2 3220 3305 -8 263 297 167 32 chr5 88333936 88334182 -114751350 - L2 LINE L2 -182 3131 2853 377 290 173 33 chr5 88334274 88334574 -114750958 - L2 LINE L2 -639 2675 2334 2810 175 24 13 chr5 88335487 88336040 -114749492 + MER89 LTR ERV1 1 559 0 930 294 81 30 chr5 88336164 88336599 -114748933 - MLT1J LTR MaLR -54 457 1 303 161 0 0 chr5 88339427 88339483 -114746049 + (TGGA)n Simple_repeat Simple_repeat 1 56 0 1964 109 8 0 chr5 88339571 88339838 -114745694 - AluSg SINE Alu -5 305 37 1959 152 3 0 chr5 88339986 88340288 -114745244 - AluSx SINE Alu -9 303 1 335 240 142 71 chr5 88340828 88341011 -114744521 - MLT1H LTR MaLR -18 531 336 572 121 91 0 chr5 88341217 88341316 -114744216 - AluSp/q SINE Alu -10 303 196 28 133 0 0 chr5 88342191 88342236 -114743296 + GC_rich Low_complexity Low_complexity 1 45 0 206 297 0 14 chr5 88344841 88344915 -114740617 + T-rich Low_complexity Low_complexity 3 75 0 236 266 0 0 chr5 88346860 88346924 -114738608 + T-rich Low_complexity Low_complexity 1 64 0 31 44 0 0 chr5 88347743 88347788 -114737744 + GC_rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr5 88347794 88347814 -114737718 + (T)n Simple_repeat Simple_repeat 1 20 0 238 295 0 39 chr5 88347818 88347896 -114737636 + GA-rich Low_complexity Low_complexity 4 78 0 181 115 0 0 chr5 88347931 88347957 -114737575 + (C)n Simple_repeat Simple_repeat 1 26 0 312 189 89 89 chr5 88349842 88349932 -114735600 - L1M4c LINE L1 -5334 1050 961 188 139 28 0 chr5 88354638 88354674 -114730858 + C-rich Low_complexity Low_complexity 6 42 0 228 167 0 19 chr5 88356333 88356387 -114729145 + (CCCCAA)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr5 88356698 88356720 -114728812 + AT_rich Low_complexity Low_complexity 1 22 0 21 218 0 0 chr5 88357582 88357637 -114727895 + AT_rich Low_complexity Low_complexity 1 55 0 212 94 0 0 chr5 88358365 88358397 -114727135 + (A)n Simple_repeat Simple_repeat 1 32 0 196 189 0 0 chr5 88358669 88358706 -114726826 + A-rich Low_complexity Low_complexity 1 37 0 331 230 35 35 chr5 88359196 88359283 -114726249 + L1M4 LINE L1 3111 3197 -2949 41 23 0 0 chr5 88360668 88360711 -114724821 + AT_rich Low_complexity Low_complexity 1 43 0 255 314 0 0 chr5 88361079 88361165 -114724367 + A-rich Low_complexity Low_complexity 1 86 0 28 116 0 0 chr5 88362017 88362060 -114723472 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 88362185 88362206 -114723326 + AT_rich Low_complexity Low_complexity 1 21 0 223 195 0 0 chr5 88362245 88362286 -114723246 + A-rich Low_complexity Low_complexity 1 41 0 206 42 0 0 chr5 88363545 88363569 -114721963 + (C)n Simple_repeat Simple_repeat 1 24 0 824 187 128 32 chr5 88364121 88364308 -114721224 - MER63A DNA MER1_type 0 210 6 1982 128 3 3 chr5 88364436 88364741 -114720791 + AluSx SINE Alu 5 309 -3 303 278 69 42 chr5 88365084 88365228 -114720304 + FRAM SINE Alu 1 147 -19 474 184 35 0 chr5 88366214 88366301 -114719231 - Tigger5 DNA MER2_type 0 2323 2234 1377 164 12 20 chr5 88366460 88366710 -114718822 - AluJb SINE Alu -28 284 37 413 181 12 24 chr5 88367546 88367629 -114717903 - Tigger5 DNA MER2_type 0 2323 2242 261 0 0 0 chr5 88367629 88367658 -114717874 + (TA)n Simple_repeat Simple_repeat 2 30 0 1666 77 0 9 chr5 88367658 88367880 -114717652 - AluY SINE Alu -9 302 83 339 161 0 18 chr5 88367900 88367956 -114717576 - Tigger5 DNA MER2_type -2268 55 1 1360 160 118 8 chr5 88368396 88368658 -114716874 + AluSg SINE Alu 1 291 -19 3572 148 28 67 chr5 88369046 88369215 -114716317 + LTR8 LTR ERV1 2 176 -515 2210 112 0 0 chr5 88369215 88369527 -114716005 - AluSx SINE Alu 0 312 1 3572 148 28 67 chr5 88369527 88370075 -114715457 + LTR8 LTR ERV1 176 691 0 245 285 151 21 chr5 88370189 88370375 -114715157 - MLT1G1-int LTR MaLR -830 541 332 2013 146 130 3 chr5 88370418 88370795 -114714737 - MSTA LTR MaLR -1 427 3 994 147 0 0 chr5 88370966 88371116 -114714416 + AluJo SINE Alu 1 150 -162 488 213 49 39 chr5 88371119 88371332 -114714200 - LTR23 LTR ERV1 0 445 242 649 255 119 58 chr5 88371525 88372020 -114713512 - MLT1G1 LTR MaLR -3 527 1 1190 272 69 60 chr5 88372020 88372282 -114713250 + L2 LINE L2 2740 2998 -315 2699 97 11 0 chr5 88372282 88372642 -114712890 - THE1B LTR MaLR 0 364 1 1190 272 69 60 chr5 88372642 88372950 -114712582 + L2 LINE L2 2998 3313 0 306 231 297 0 chr5 88373221 88373312 -114712220 - FLAM_A SINE Alu -15 118 1 2248 88 3 0 chr5 88373336 88373633 -114711899 - AluSq SINE Alu -15 298 1 384 246 106 41 chr5 88373765 88374006 -114711526 + L1ME4a LINE L1 5494 5746 -375 375 277 139 35 chr5 88374011 88374123 -114711409 + L1ME4a LINE L1 5779 5878 -243 1611 177 0 31 chr5 88374123 88374440 -114711092 + AluJo SINE Alu 2 308 -4 375 277 139 35 chr5 88374440 88374529 -114711003 + L1ME4a LINE L1 5878 6001 -120 248 214 393 0 chr5 88374968 88375057 -114710475 - MIR SINE MIR 0 262 139 323 211 22 33 chr5 88375450 88375553 -114709979 + L1MC5 LINE L1 6738 6918 -1124 27 49 0 0 chr5 88375742 88375783 -114709749 + AT_rich Low_complexity Low_complexity 1 41 0 30 45 0 0 chr5 88376060 88376104 -114709428 + AT_rich Low_complexity Low_complexity 1 44 0 1204 260 90 6 chr5 88376191 88376514 -114709018 - MLT1I LTR MaLR -1 408 59 28 29 0 0 chr5 88376804 88376839 -114708693 + AT_rich Low_complexity Low_complexity 1 35 0 774 146 0 76 chr5 88376839 88376983 -114708549 + AluJo SINE Alu 3 135 -177 275 324 150 60 chr5 88377984 88378597 -114706935 + L2 LINE L2 2587 3272 0 470 317 15 20 chr5 88380048 88380250 -114705282 - MIR SINE MIR -48 214 14 3365 131 63 4 chr5 88380656 88381215 -114704317 - MER39B LTR ERV1 -61 592 1 1971 107 59 0 chr5 88381577 88381867 -114703665 - AluSx SINE Alu -5 307 1 1021 206 200 68 chr5 88382113 88382609 -114702923 - MLT1E3 LTR MaLR -5 619 59 199 371 10 21 chr5 88383422 88383519 -114702013 + L2 LINE L2 2995 3090 -182 1602 153 16 100 chr5 88384448 88384779 -114700753 - MLT1B LTR MaLR -43 347 50 2430 111 28 17 chr5 88384779 88385139 -114700393 + THE1B LTR MaLR 1 364 0 1602 153 16 100 chr5 88385139 88385186 -114700346 - MLT1B LTR MaLR -340 50 1 351 65 0 0 chr5 88385235 88385281 -114700251 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 2073 102 7 0 chr5 88385281 88385566 -114699966 - AluSq SINE Alu -26 287 1 1902 158 46 9 chr5 88386117 88386465 -114699067 + MLT1A1 LTR MaLR 5 365 0 2218 136 43 3 chr5 88386622 88386997 -114698535 + MLT1B LTR MaLR 1 390 0 1742 121 37 34 chr5 88387104 88387401 -114698131 - AluSx SINE Alu -14 298 1 245 91 0 0 chr5 88387465 88387498 -114698034 + L1MA9 LINE L1 6280 6312 0 244 0 56 0 chr5 88387519 88387555 -114697977 + (GAA)n Simple_repeat Simple_repeat 2 39 0 197 286 100 0 chr5 88388193 88388263 -114697269 - MER5A DNA MER1_type -83 106 30 310 255 99 21 chr5 88388818 88388959 -114696573 - L1ME4a LINE L1 -1 6120 5969 4338 78 5 2 chr5 88389103 88389665 -114695867 - LTR6A LTR ERV1 0 564 1 2988 183 92 58 chr5 88389667 88390572 -114694960 + LTR5 LTR ERVK 34 969 0 1723 141 0 56 chr5 88390583 88390887 -114694645 + AluJo SINE Alu 1 287 -25 751 302 70 13 chr5 88390895 88391363 -114694169 - L1ME4a LINE L1 -302 5819 5329 2920 59 3 0 chr5 88391414 88391768 -114693764 - THE1A LTR MaLR 0 355 1 1982 112 62 59 chr5 88392072 88392290 -114693242 - THE1C LTR MaLR 0 375 154 2267 120 0 3 chr5 88392290 88392591 -114692941 + AluSx SINE Alu 1 300 -12 1982 112 62 59 chr5 88392591 88392746 -114692786 - THE1C LTR MaLR -221 154 1 2178 108 0 7 chr5 88394751 88395048 -114690484 - AluSx SINE Alu -17 295 1 805 276 14 5 chr5 88395124 88395341 -114690191 + MIR SINE MIR 29 247 -15 883 257 156 30 chr5 88395535 88395839 -114689693 - MLT1D LTR MaLR 0 505 122 2156 123 0 3 chr5 88395839 88396131 -114689401 + AluSx SINE Alu 2 292 -20 883 257 156 30 chr5 88396131 88396256 -114689276 - MLT1D LTR MaLR -383 122 14 1419 155 149 28 chr5 88396257 88396468 -114689064 - MLT1A1 LTR MaLR 0 365 100 1833 151 0 47 chr5 88396468 88396786 -114688746 - AluJb SINE Alu -9 303 1 1419 155 149 28 chr5 88396786 88396896 -114688636 - MLT1A1 LTR MaLR -265 100 5 392 286 0 34 chr5 88396923 88397042 -114688490 + MIR SINE MIR 13 127 -135 2201 174 48 3 chr5 88397413 88397888 -114687644 - MER89 LTR ERV1 0 559 1 1587 170 0 82 chr5 88398485 88398802 -114686730 + AluJo SINE Alu 1 291 -21 2091 202 86 25 chr5 88398827 88399341 -114686191 - MLT1E3 LTR MaLR 0 624 80 2734 86 121 0 chr5 88399352 88399748 -114685784 + MLT2A1 LTR ERVL 1 444 0 2433 143 57 5 chr5 88399895 88400300 -114685232 + MSTB LTR MaLR 1 426 0 1162 184 138 69 chr5 88400340 88400687 -114684845 + MSTA LTR MaLR 1 371 -57 2263 108 7 0 chr5 88400719 88401014 -114684518 + AluSp SINE Alu 1 297 -16 352 58 39 0 chr5 88401020 88401072 -114684460 + MSTA LTR MaLR 358 411 -17 1969 107 34 10 chr5 88401077 88401368 -114684164 - AluSx SINE Alu -14 298 1 749 294 112 14 chr5 88401411 88401758 -114683774 - MLT1J2 LTR MaLR -65 385 5 492 288 71 5 chr5 88401775 88401973 -114683559 - MIR SINE MIR -50 212 2 251 285 66 58 chr5 88402027 88402164 -114683368 - MER5A DNA MER1_type -22 167 30 226 290 0 0 chr5 88402111 88402173 -114683359 + MER5A DNA MER1_type 118 179 -10 * 567 259 40 50 chr5 88402704 88402905 -114682627 - MIR SINE MIR -51 211 13 1369 144 179 22 chr5 88402932 88403042 -114682490 + MLT1A1 LTR MaLR 5 96 -269 1821 150 0 53 chr5 88403042 88403362 -114682170 + AluJb SINE Alu 1 303 -9 1369 144 179 22 chr5 88403362 88403563 -114681969 + MLT1A1 LTR MaLR 96 365 0 616 246 33 33 chr5 88404175 88404358 -114681174 - LTR33A LTR ERVL -29 494 312 241 183 84 42 chr5 88404687 88404758 -114680774 + MER5B DNA MER1_type 105 178 0 575 191 7 68 chr5 88406221 88406368 -114679164 - FRAM SINE Alu -44 132 1 253 200 33 50 chr5 88406523 88406583 -114678949 - AluJ/FLAM SINE Alu -243 59 1 5870 179 40 60 chr5 88406595 88406755 -114678777 - L1 LINE L1 -1665 4481 4319 1825 139 3 55 chr5 88406755 88407064 -114678468 - AluSx SINE Alu -19 293 1 5870 179 40 60 chr5 88407064 88408264 -114677268 - L1 LINE L1 -1827 4319 3149 1524 146 15 34 chr5 88408264 88408567 -114676965 - AluJb SINE Alu 0 320 23 5870 179 40 60 chr5 88408567 88408710 -114676822 - L1 LINE L1 -2997 3149 3005 2207 125 3 0 chr5 88409652 88409964 -114675568 - AluSp SINE Alu 0 313 1 220 282 26 13 chr5 88410541 88410619 -114674913 + MIR3 SINE MIR 115 193 -15 2382 83 0 26 chr5 88410768 88411080 -114674452 + AluSx SINE Alu 1 304 -8 514 212 62 0 chr5 88411110 88411223 -114674309 + FLAM_A SINE Alu 1 120 -13 363 263 129 27 chr5 88412112 88412298 -114673234 + LTR16A LTR ERVL 245 449 -1 344 267 93 23 chr5 88412350 88412522 -114673010 - MIR SINE MIR -54 208 25 2498 84 3 0 chr5 88412704 88413014 -114672518 - AluSp SINE Alu -2 311 1 1011 148 0 0 chr5 88413068 88413217 -114672315 + FRAM SINE Alu 23 171 -5 361 141 0 31 chr5 88413969 88414033 -114671499 - AluJ/FLAM SINE Alu -240 62 1 387 226 78 0 chr5 88414432 88414534 -114670998 + L2 LINE L2 3200 3309 -4 653 187 49 0 chr5 88414590 88414713 -114670819 - FLAM_C SINE Alu -4 129 1 2297 119 0 0 chr5 88415516 88415827 -114669705 + AluSx SINE Alu 1 311 -1 1647 146 95 3 chr5 88417339 88417655 -114667877 + L1PA16 LINE L1 5821 6165 -1 432 255 123 66 chr5 88419232 88419565 -114665967 - L1ME4a LINE L1 -6 6115 5764 829 300 45 28 chr5 88420754 88421177 -114664355 - L1ME4a LINE L1 -422 5699 5270 280 200 0 0 chr5 88421551 88421606 -114663926 - LTR50 LTR ERVL -111 684 630 2092 99 0 25 chr5 88423000 88423282 -114662250 + AluSx SINE Alu 23 297 -15 231 306 54 27 chr5 88424483 88424594 -114660938 + L2 LINE L2 3134 3247 -25 27 39 0 19 chr5 88424705 88424722 -114660810 + AT_rich Low_complexity Low_complexity 1 17 -34 1921 152 0 7 chr5 88424722 88425019 -114660513 - AluSx SINE Alu -17 295 1 27 39 0 19 chr5 88425019 88425053 -114660479 + AT_rich Low_complexity Low_complexity 17 51 0 345 318 45 0 chr5 88425236 88425368 -114660164 + MIR SINE MIR 52 189 -73 2463 84 0 0 chr5 88425826 88426125 -114659407 - AluSp SINE Alu -14 299 1 1470 290 105 101 chr5 88426603 88427820 -114657712 + L3 LINE CR1 46 1273 -304 1567 161 12 71 chr5 88427820 88427948 -114657584 + AluJo SINE Alu 1 135 -177 2072 96 0 44 chr5 88427948 88428241 -114657291 - AluSg SINE Alu -30 280 1 1567 161 12 71 chr5 88428241 88428434 -114657098 + AluJo SINE Alu 135 303 -9 1470 290 105 101 chr5 88428434 88428706 -114656826 + L3 LINE CR1 1273 1542 -35 297 0 0 0 chr5 88428929 88428962 -114656570 + (TG)n Simple_repeat Simple_repeat 2 34 0 732 81 0 105 chr5 88429665 88429789 -114655743 - AluSg/x SINE Alu -133 179 69 3224 150 24 97 chr5 88430447 88431192 -114654340 - LTR8 LTR ERV1 0 691 1 182 293 17 17 chr5 88432039 88432097 -114653435 - L2 LINE L2 -5 3267 3210 261 83 42 0 chr5 88432583 88432631 -114652901 - L1MA4A LINE L1 -3 6300 6251 22 0 0 0 chr5 88432774 88432796 -114652736 + AT_rich Low_complexity Low_complexity 1 22 0 199 222 73 51 chr5 88433179 88433265 -114652267 - MIR SINE MIR -65 143 58 675 251 91 104 chr5 88433300 88433858 -114651674 - L1ME4a LINE L1 -13 6108 5558 972 78 0 0 chr5 88434015 88434131 -114651401 - AluSg SINE Alu -165 145 30 221 0 0 33 chr5 88434367 88434397 -114651135 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1903 149 9 37 chr5 88434441 88434615 -114650917 - AluJo SINE Alu 0 312 150 2433 97 0 0 chr5 88434615 88434915 -114650617 - AluSg SINE Alu -10 300 1 1903 149 9 37 chr5 88434915 88435061 -114650471 - AluJo SINE Alu -162 150 1 190 213 43 0 chr5 88435071 88435118 -114650414 + L3b LINE CR1 1378 1426 -157 294 280 116 48 chr5 88435208 88435336 -114650196 + MIR SINE MIR 51 198 -64 2037 157 0 0 chr5 88435336 88435642 -114649890 + AluJb SINE Alu 1 306 -6 294 280 116 48 chr5 88435642 88435702 -114649830 + MIR SINE MIR 198 252 -10 254 281 150 44 chr5 88435773 88435933 -114649599 + L2 LINE L2 3124 3300 -13 317 235 60 115 chr5 88436423 88436606 -114648926 + MER5B DNA MER1_type 1 173 -5 189 329 25 13 chr5 88437690 88437769 -114647763 - L2 LINE L2 -45 3227 3148 2336 91 7 0 chr5 88439346 88439643 -114645889 + AluSg SINE Alu 1 299 -11 1758 148 32 0 chr5 88440785 88441068 -114644464 + AluJb SINE Alu 12 303 -9 7210 54 16 19 chr5 88442829 88443905 -114641627 - L1PA5 LINE L1 -1 6153 5082 416 320 78 56 chr5 88444147 88444750 -114640782 + L1MEd LINE L1 122 737 -5382 1312 137 0 32 chr5 88444828 88445047 -114640485 + AluJb SINE Alu 90 301 -11 674 273 115 22 chr5 88445055 88445411 -114640121 + L1MEd LINE L1 868 1256 -4863 1883 61 0 12 chr5 88446166 88446412 -114639120 + AluY SINE Alu 60 302 -9 182 329 14 0 chr5 88446565 88446635 -114638897 + MIR SINE MIR 70 140 -122 * 535 170 9 45 chr5 88446633 88446745 -114638787 - MIR SINE MIR -50 212 105 924 158 12 18 chr5 88446756 88446921 -114638611 + FRAM SINE Alu 2 165 -11 190 267 0 0 chr5 88446954 88446999 -114638533 - MIR SINE MIR -216 46 2 1450 113 24 16 chr5 88447377 88447624 -114637908 + L1MA9 LINE L1 6062 6310 -2 22 80 0 0 chr5 88447624 88447674 -114637858 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 88447686 88447710 -114637822 + AT_rich Low_complexity Low_complexity 1 24 0 372 43 0 0 chr5 88451942 88451988 -114633544 + (CA)n Simple_repeat Simple_repeat 2 47 0 554 245 129 27 chr5 88452086 88452233 -114633299 + MER63A DNA MER1_type 49 210 0 2293 89 0 3 chr5 88453675 88453979 -114631553 - AluY SINE Alu -8 303 1 716 294 40 4 chr5 88454182 88454430 -114631102 + MIR SINE MIR 3 259 -3 1767 99 44 0 chr5 88454922 88455174 -114630358 - AluSx SINE Alu -15 297 35 1310 190 89 37 chr5 88455220 88455546 -114629986 + MER2 DNA MER2_type 2 344 0 406 318 61 7 chr5 88455546 88455694 -114629838 + MIR SINE MIR 75 230 -32 816 194 38 16 chr5 88456659 88456845 -114628687 - MIR SINE MIR -63 145 5 285 198 9 164 chr5 88457742 88457858 -114627674 - Charlie8 DNA MER1_type -2 2415 231 449 277 91 56 chr5 88458593 88458824 -114626708 - MIR SINE MIR -11 251 13 263 267 27 13 chr5 88458844 88458919 -114626613 - MIR SINE MIR -111 151 76 2173 104 0 0 chr5 88460805 88461103 -114624429 - AluSc SINE Alu -11 298 1 181 188 0 0 chr5 88461127 88461159 -114624373 + L2 LINE L2 3205 3236 -36 1116 233 133 23 chr5 88461500 88462179 -114623353 - MER20B DNA MER1_type -5 778 1 215 282 155 19 chr5 88462419 88462522 -114623010 - L2 LINE L2 -83 3189 3073 1930 179 0 58 chr5 88463603 88463716 -114621816 - MLT1A2 LTR MaLR 0 374 256 2668 158 29 5 chr5 88463716 88464160 -114621372 - MSTB2 LTR MaLR -2 455 1 1930 179 0 58 chr5 88464160 88464443 -114621089 - MLT1A2 LTR MaLR -118 256 1 1981 99 0 25 chr5 88465715 88465997 -114619535 + AluSx SINE Alu 23 297 -15 342 68 0 0 chr5 88466578 88466622 -114618910 - AluSx SINE Alu -256 44 1 2072 112 0 32 chr5 88467059 88467371 -114618161 + AluSx SINE Alu 1 302 -10 2254 82 3 3 chr5 88468188 88468491 -114617041 + AluSg SINE Alu 1 303 -7 1648 132 3 123 chr5 88468789 88469129 -114616403 + AluJb SINE Alu 1 299 -3 2124 98 55 6 chr5 88469741 88470069 -114615463 - L1MA2 LINE L1 -2 6302 5959 213 39 0 0 chr5 88470837 88470863 -114614669 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3821 117 40 40 chr5 88470863 88471536 -114613996 - L1PA13 LINE L1 -9 6154 5482 1832 121 7 20 chr5 88471996 88472294 -114613238 - AluSx SINE Alu -18 294 1 207 321 134 0 chr5 88472603 88472715 -114612817 - MIR SINE MIR -60 148 22 1346 211 79 11 chr5 88473628 88473984 -114611548 - LTR34 LTR ERV1 0 699 320 298 250 16 0 chr5 88474090 88474154 -114611378 + MIR SINE MIR 48 112 -150 938 125 0 44 chr5 88474169 88474297 -114611235 + AluSc SINE Alu 1 122 -187 279 0 0 0 chr5 88474297 88474328 -114611204 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 938 125 0 44 chr5 88474328 88474359 -114611173 + AluSc SINE Alu 122 153 -156 180 0 0 0 chr5 88474359 88474379 -114611153 + (A)n Simple_repeat Simple_repeat 1 20 0 712 174 50 0 chr5 88475196 88475317 -114610215 - FLAM_A SINE Alu -6 136 10 2197 73 3 7 chr5 88475396 88475682 -114609850 - AluY SINE Alu -25 286 2 250 279 0 0 chr5 88476046 88476107 -114609425 + (TA)n Simple_repeat Simple_repeat 2 62 0 185 125 25 0 chr5 88476529 88476546 -114608986 + (TAAA)n Simple_repeat Simple_repeat 4 19 -25 1064 215 8 24 chr5 88476546 88476792 -114608740 + L1MC2 LINE L1 6103 6344 0 185 125 25 0 chr5 88476792 88476814 -114608718 + (TAAA)n Simple_repeat Simple_repeat 19 44 0 182 220 40 20 chr5 88476814 88476864 -114608668 + L2 LINE L2 3220 3270 -2 225 294 183 13 chr5 88477092 88477245 -114608287 + L1MC/D LINE L1 5623 5801 -2007 1880 138 81 43 chr5 88477265 88477373 -114608159 + MLT1B LTR MaLR 6 108 -282 1660 138 31 31 chr5 88477373 88477664 -114607868 + AluSx SINE Alu 1 291 -21 1880 138 81 43 chr5 88477664 88477926 -114607606 + MLT1B LTR MaLR 108 390 0 1526 142 23 68 chr5 88478148 88478458 -114607074 + AluJb SINE Alu 7 302 -10 186 339 15 15 chr5 88479172 88479237 -114606295 + MIR3 SINE MIR 98 162 -46 455 261 80 7 chr5 88479250 88479388 -114606144 + MER117 DNA MER1_type 12 159 -38 1666 185 153 57 chr5 88479592 88480100 -114605432 + LTR64 LTR ERVK 2 558 0 2096 120 0 3 chr5 88481347 88481648 -114603884 + AluSx SINE Alu 1 300 -12 373 266 55 9 chr5 88481723 88481832 -114603700 - MIR SINE MIR -83 179 66 230 299 84 37 chr5 88482222 88482329 -114603203 - L2 LINE L2 0 3272 3161 288 299 98 49 chr5 88482402 88482770 -114602762 + L1ME4a LINE L1 5733 6118 -3 291 121 11 143 chr5 88482965 88482999 -114602533 + L1MB2 LINE L1 6093 6130 -41 2073 118 0 0 chr5 88482999 88483286 -114602246 + AluSq SINE Alu 1 287 -26 291 121 11 143 chr5 88483286 88483342 -114602190 + L1MB2 LINE L1 6130 6171 0 27 0 0 0 chr5 88483416 88483443 -114602089 + AT_rich Low_complexity Low_complexity 1 27 0 2584 153 21 2 chr5 88483451 88483869 -114601663 + MSTA LTR MaLR 2 427 -1 721 153 22 82 chr5 88484542 88484725 -114600807 - MER20B DNA MER1_type 0 219 48 195 138 0 0 chr5 88484883 88484912 -114600620 + L3b LINE CR1 1298 1326 -257 23 0 0 0 chr5 88485083 88485106 -114600426 + AT_rich Low_complexity Low_complexity 1 23 0 1965 148 0 0 chr5 88485113 88485417 -114600115 + AluJo SINE Alu 1 304 -8 204 38 0 113 chr5 88485462 88485515 -114600017 + (TTTTTA)n Simple_repeat Simple_repeat 3 49 0 48 43 0 0 chr5 88485517 88485586 -114599946 + AT_rich Low_complexity Low_complexity 1 69 0 310 192 232 30 chr5 88486033 88486132 -114599400 - L2 LINE L2 -8 3305 3187 396 217 24 12 chr5 88486209 88486292 -114599240 - MIR3 SINE MIR -48 160 77 2009 115 4 0 chr5 88486643 88486922 -114598610 + AluSp SINE Alu 1 280 -33 1195 79 0 0 chr5 88486922 88487074 -114598458 + AluSc SINE Alu 144 295 -14 2067 108 7 3 chr5 88488311 88488617 -114596915 + AluSx SINE Alu 1 307 -5 201 261 250 0 chr5 88489474 88489566 -114595966 + MER5A DNA MER1_type 1 115 -74 243 0 0 0 chr5 88489578 88489605 -114595927 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1477 189 7 11 chr5 88490249 88490535 -114594997 + AluJb SINE Alu 1 285 -27 255 93 0 0 chr5 88490929 88490972 -114594560 + (TG)n Simple_repeat Simple_repeat 2 44 0 2154 86 3 3 chr5 88490972 88491257 -114594275 - AluSq SINE Alu -28 285 1 1495 177 25 7 chr5 88491259 88491541 -114593991 - AluJo SINE Alu -25 287 1 1391 178 138 13 chr5 88491590 88491894 -114593638 + MER2 DNA MER2_type 2 343 -1 2333 78 0 22 chr5 88492228 88492547 -114592985 + AluSq SINE Alu 1 312 -1 1669 148 0 55 chr5 88492565 88492876 -114592656 + AluJb SINE Alu 3 296 -16 2042 114 10 0 chr5 88493018 88493308 -114592224 - AluSq SINE Alu -19 294 2 1687 103 4 0 chr5 88493314 88493557 -114591975 - AluSq SINE Alu 0 313 70 226 289 99 33 chr5 88493568 88493689 -114591843 - MIR SINE MIR -9 253 125 234 261 34 34 chr5 88494338 88494426 -114591106 - MIR SINE MIR 0 262 175 1078 144 20 15 chr5 88494453 88494655 -114590877 - AluSg/x SINE Alu -22 290 88 318 216 57 11 chr5 88494678 88494766 -114590766 - MIR SINE MIR -86 176 85 396 289 59 15 chr5 88495124 88495259 -114590273 - MIR SINE MIR 0 262 122 2129 100 0 3 chr5 88495291 88495581 -114589951 - AluSx SINE Alu -23 289 1 255 284 0 0 chr5 88495629 88495696 -114589836 + A-rich Low_complexity Low_complexity 1 67 0 929 113 0 0 chr5 88495864 88495997 -114589535 + AluSx SINE Alu 1 133 -180 1046 153 6 0 chr5 88496072 88496249 -114589283 + AluSx SINE Alu 120 297 -15 1275 157 3 77 chr5 88496331 88496618 -114588914 + AluJb SINE Alu 7 272 -40 220 70 47 0 chr5 88496619 88496662 -114588870 + (CAGGG)n Simple_repeat Simple_repeat 5 49 0 252 222 17 40 chr5 88496682 88496858 -114588674 + (CAA)n Simple_repeat Simple_repeat 2 173 0 * 346 219 16 62 chr5 88496757 88497138 -114588394 + A-rich Low_complexity Low_complexity 1 363 0 200 188 0 0 chr5 88497382 88497414 -114588118 + polypurine Low_complexity Low_complexity 1 32 0 1289 190 119 19 chr5 88497532 88497801 -114587731 - AluJo SINE Alu -6 296 1 2056 89 34 7 chr5 88498094 88498385 -114587147 - AluSx SINE Alu 0 312 14 289 235 44 15 chr5 88498817 88498885 -114586647 + MIR SINE MIR 176 245 -17 388 276 94 0 chr5 88498920 88499047 -114586485 + MIR SINE MIR 97 235 -27 1574 133 97 7 chr5 88499311 88499589 -114585943 + AluSx SINE Alu 1 303 -9 306 234 88 58 chr5 88499756 88499893 -114585639 - MIR SINE MIR -77 185 45 1473 144 63 14 chr5 88499896 88500216 -114585316 - AluJb SINE Alu 0 342 9 826 170 88 0 chr5 88500762 88500933 -114584599 + L1MB8 LINE L1 4807 4992 -1154 1703 178 7 10 chr5 88500941 88501245 -114584287 + AluJo SINE Alu 1 303 -9 2306 77 0 0 chr5 88501245 88501545 -114583987 + AluY SINE Alu 1 300 -11 822 178 105 27 chr5 88501545 88501626 -114583906 + L1MB8 LINE L1 5730 5803 -375 2034 128 3 0 chr5 88501626 88501923 -114583609 + AluSg SINE Alu 1 298 -12 822 178 105 27 chr5 88501923 88502060 -114583472 + L1MB8 LINE L1 5803 5965 -213 2306 75 0 3 chr5 88502238 88502532 -114583000 + AluSp SINE Alu 1 293 -20 2368 90 0 0 chr5 88502894 88503204 -114582328 - AluSg SINE Alu 0 310 1 2002 153 18 29 chr5 88504010 88504395 -114581137 - L1MB2 LINE L1 0 6171 5791 302 256 51 51 chr5 88504400 88504517 -114581015 - L1MB2 LINE L1 -1985 5823 5707 1137 122 6 6 chr5 88504678 88504859 -114580673 - AluSg/x SINE Alu 0 310 130 331 274 137 8 chr5 88504859 88504983 -114580549 - L1MB2 LINE L1 -702 5419 5280 526 262 169 13 chr5 88505268 88505493 -114580039 - MIR SINE MIR -1 261 2 2185 90 10 3 chr5 88505622 88505921 -114579611 - AluSx SINE Alu -11 301 1 1736 118 90 10 chr5 88505932 88506221 -114579311 - AluSx SINE Alu 0 312 1 1626 148 0 4 chr5 88506463 88506719 -114578813 - AluJb SINE Alu -47 265 11 2388 64 0 10 chr5 88506916 88507228 -114578304 + AluSc SINE Alu 1 309 0 1854 128 10 23 chr5 88507597 88507903 -114577629 + AluSx SINE Alu 1 302 -10 211 261 98 84 chr5 88508051 88508254 -114577278 + MIR3 SINE MIR 3 208 0 438 176 29 20 chr5 88508582 88508684 -114576848 - U13 snRNA snRNA 0 104 2 216 300 88 12 chr5 88508860 88508940 -114576592 + L3 LINE CR1 1371 1456 -121 1521 162 0 32 chr5 88509785 88510069 -114575463 - AluJb SINE Alu -37 275 1 2222 111 0 0 chr5 88510284 88510591 -114574941 + AluSc SINE Alu 1 307 -2 816 184 0 13 chr5 88510676 88510828 -114574704 + FRAM SINE Alu 1 40 0 426 203 18 150 chr5 88510837 88510936 -114574596 + L1MEc LINE L1 2198 2252 -4144 1440 205 0 26 chr5 88510936 88511248 -114574284 + AluJo SINE Alu 1 304 -8 426 203 18 150 chr5 88511248 88511375 -114574157 + L1MEc LINE L1 2252 2394 -4002 1877 148 0 14 chr5 88511431 88511567 -114573965 + AluSx SINE Alu 1 137 -175 2198 112 0 0 chr5 88511567 88511871 -114573661 + AluSg SINE Alu 1 304 -6 1877 148 0 14 chr5 88511871 88512024 -114573508 + AluSx SINE Alu 137 286 -26 1283 148 0 5 chr5 88512029 88512231 -114573301 + LOR1a LTR ERV1 297 497 0 303 258 47 23 chr5 88512254 88512382 -114573150 + LTR33A LTR ERVL 386 516 -7 371 276 76 48 chr5 88512553 88512698 -114572834 + L3 LINE CR1 1428 1576 -1 817 144 0 0 chr5 88512721 88512839 -114572693 + FLAM_C SINE Alu 1 118 -25 396 0 0 0 chr5 88512841 88512885 -114572647 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 2070 125 3 0 chr5 88513317 88513612 -114571920 - AluSx SINE Alu -16 296 1 612 133 42 77 chr5 88513616 88513646 -114571886 - AluJo/FRAM SINE Alu -13 299 269 2106 99 26 3 chr5 88513646 88513948 -114571584 + AluSg SINE Alu 1 309 -1 612 133 42 77 chr5 88513948 88514060 -114571472 - AluJo/FRAM SINE Alu -43 269 162 2104 126 0 0 chr5 88514703 88515012 -114570520 - AluSx SINE Alu -3 309 1 198 0 0 0 chr5 88515063 88515085 -114570447 + (A)n Simple_repeat Simple_repeat 1 22 0 216 0 0 0 chr5 88515377 88515401 -114570131 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2882 145 30 62 chr5 88516829 88516952 -114568580 - MER44D DNA MER2_type -1883 604 479 1915 108 7 20 chr5 88516952 88517249 -114568283 - AluJb SINE Alu -19 293 1 2882 145 30 62 chr5 88517249 88517692 -114567840 - MER44D DNA MER2_type -2008 479 1 744 281 91 29 chr5 88517731 88518105 -114567427 + Tigger8 DNA MER2_type 220 616 -50 2395 60 0 3 chr5 88518130 88518428 -114567104 + AluY SINE Alu 1 297 -14 329 285 156 16 chr5 88518539 88518618 -114566914 + L1ME4a LINE L1 5866 5933 -188 2214 93 3 3 chr5 88518618 88518928 -114566604 + AluSq SINE Alu 1 310 -3 329 285 156 16 chr5 88518928 88519034 -114566498 + L1ME4a LINE L1 5933 6077 -44 1849 118 52 0 chr5 88519451 88519723 -114565809 - AluSg SINE Alu -24 286 1 1385 150 13 4 chr5 88519875 88520109 -114565423 + MER67B LTR ERV1 424 659 -2 1121 157 10 5 chr5 88520177 88520374 -114565158 + AluJo SINE Alu 84 281 -31 537 16 0 0 chr5 88520378 88520440 -114565092 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2165 101 3 0 chr5 88520551 88520849 -114564683 + AluSx SINE Alu 1 299 -13 1992 127 13 3 chr5 88521155 88521462 -114564070 - AluSx SINE Alu -2 310 1 185 371 48 19 chr5 88521504 88521609 -114563923 + L2 LINE L2 3144 3251 -21 460 288 110 16 chr5 88521775 88521966 -114563566 - MIR SINE MIR -34 228 20 712 296 101 35 chr5 88522013 88522381 -114563151 + L2 LINE L2 2233 2624 -690 196 240 240 0 chr5 88522387 88522462 -114563070 + L2 LINE L2 3191 3283 -30 364 280 40 89 chr5 88522509 88522834 -114562698 + L2 LINE L2 2630 2938 -376 1910 114 23 23 chr5 88523020 88523326 -114562206 - AluSp SINE Alu -7 306 1 229 34 17 85 chr5 88525194 88525253 -114560279 + (CCCCG)n Simple_repeat Simple_repeat 5 59 0 2015 46 111 11 chr5 88525956 88526236 -114559296 - AluSg1 SINE Alu -1 308 1 465 239 9 26 chr5 88526307 88526420 -114559112 - MIR SINE MIR -63 145 35 233 250 0 31 chr5 88526996 88527060 -114558472 - MIR SINE MIR -130 78 17 1027 217 128 87 chr5 88527060 88527318 -114558214 + MER34C LTR ERV1 1 247 -338 2425 65 0 0 chr5 88527318 88527626 -114557906 - AluSg SINE Alu -2 308 1 1027 217 128 87 chr5 88527626 88527848 -114557684 + MER34C LTR ERV1 247 510 -75 2210 81 3 7 chr5 88527848 88528146 -114557386 + AluSg SINE Alu 1 297 -13 1027 217 128 87 chr5 88528146 88528226 -114557306 + MER34C LTR ERV1 510 585 0 2012 136 0 0 chr5 88528311 88528612 -114556920 + AluSq SINE Alu 1 301 -12 238 286 257 9 chr5 88528658 88528763 -114556769 + MIR SINE MIR 21 151 -111 3895 129 44 5 chr5 88528764 88529375 -114556157 + MER41B LTR ERV1 1 635 0 1390 121 17 26 chr5 88529375 88529607 -114555925 + MER39B LTR ERV1 424 653 0 332 321 0 0 chr5 88529744 88529828 -114555704 + (CCCCAG)n Simple_repeat Simple_repeat 1 84 0 1934 153 7 0 chr5 88530016 88530323 -114555209 + AluSx SINE Alu 1 309 -3 2572 42 0 0 chr5 88530483 88530792 -114554740 + AluY SINE Alu 1 309 -2 1780 100 0 4 chr5 88531175 88531415 -114554117 + AluSq SINE Alu 1 239 -74 257 0 30 0 chr5 88531748 88531781 -114553751 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1699 141 0 38 chr5 88531786 88532076 -114553456 - AluJb SINE Alu -32 280 2 848 113 0 56 chr5 88532093 88532235 -114553297 - AluSg SINE Alu -176 134 1 2088 116 0 0 chr5 88532236 88532530 -114553002 - AluSx SINE Alu -17 295 2 333 238 93 40 chr5 88532572 88532723 -114552809 - HAL1 LINE L1 -7 2500 2342 443 87 14 0 chr5 88532723 88532792 -114552740 + (TA)n Simple_repeat Simple_repeat 2 71 0 1829 128 0 59 chr5 88532792 88532946 -114552586 - AluSx SINE Alu -25 287 125 2052 115 0 3 chr5 88532946 88533242 -114552290 - AluSc SINE Alu -14 295 1 2155 100 0 10 chr5 88533248 88533549 -114551983 - AluSg1 SINE Alu -11 298 1 1829 128 0 59 chr5 88533549 88533692 -114551840 - AluSx SINE Alu -192 120 1 990 80 0 0 chr5 88533740 88533865 -114551667 - AluSq/x SINE Alu -188 125 1 567 301 14 0 chr5 88534135 88534278 -114551254 + MIR SINE MIR 2 146 -116 1511 110 129 29 chr5 88534416 88534688 -114550844 - AluSx SINE Alu -13 299 1 1347 162 150 15 chr5 88534698 88534964 -114550568 - AluJo SINE Alu 0 302 1 381 229 209 43 chr5 88534986 88535196 -114550336 - HAL1 LINE L1 -556 1951 1707 1927 86 8 0 chr5 88535288 88535574 -114549958 - AluSp SINE Alu 0 313 26 209 312 175 19 chr5 88535576 88535839 -114549693 + L2 LINE L2 1516 1819 -1495 1869 60 8 20 chr5 88536208 88536457 -114549075 + AluSg SINE Alu 56 301 -9 2327 74 0 0 chr5 88536661 88536960 -114548572 - AluY SINE Alu -12 299 1 1473 129 17 61 chr5 88537079 88537373 -114548159 + AluJo SINE Alu 6 286 -26 25 31 0 0 chr5 88537373 88537405 -114548127 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 88537533 88537554 -114547978 + AT_rich Low_complexity Low_complexity 1 21 0 2365 45 0 3 chr5 88537562 88537852 -114547680 + AluY SINE Alu 1 289 -22 2129 78 0 11 chr5 88538747 88539029 -114546503 - AluSg SINE Alu -31 279 1 1930 123 3 23 chr5 88539074 88539384 -114546148 + AluSx SINE Alu 1 304 -8 1936 126 3 20 chr5 88539840 88540134 -114545398 + AluSx SINE Alu 3 291 -21 1797 130 70 0 chr5 88540208 88540492 -114545040 + AluSx SINE Alu 1 304 -8 2206 93 6 10 chr5 88541154 88541466 -114544066 + AluSx SINE Alu 1 311 -1 2107 110 10 0 chr5 88541474 88541783 -114543749 + AluSx SINE Alu 1 312 0 1476 160 47 25 chr5 88541826 88542101 -114543431 + AluJo SINE Alu 24 304 -8 225 227 67 0 chr5 88542285 88542360 -114543172 + L1ME LINE L1 5422 5501 -669 2001 123 0 10 chr5 88542395 88542695 -114542837 + AluSx SINE Alu 1 297 -15 543 117 16 133 chr5 88542855 88542983 -114542549 - FLAM_A SINE Alu -20 122 10 2320 86 0 6 chr5 88543029 88543342 -114542190 - AluSx SINE Alu -1 311 1 395 271 96 14 chr5 88543434 88543452 -114542080 - L1M4 LINE L1 -1079 5067 5052 22 0 0 0 chr5 88543452 88543474 -114542058 + AT_rich Low_complexity Low_complexity 1 22 0 395 271 96 14 chr5 88543474 88543714 -114541818 - L1M4 LINE L1 -1094 5052 4765 2090 118 0 7 chr5 88543718 88544022 -114541510 - AluSc SINE Alu -7 302 1 598 186 0 42 chr5 88544028 88544146 -114541386 - FRAM SINE Alu -5 171 59 391 92 0 15 chr5 88544154 88544219 -114541313 + FLAM_A SINE Alu 70 133 0 863 207 30 0 chr5 88544298 88544462 -114541070 - FAM SINE Alu -6 169 1 800 148 7 22 chr5 88544670 88544805 -114540727 + HsTC2 DNA Tc2 1250 1558 -340 1939 95 7 0 chr5 88544817 88545090 -114540442 - AluSp SINE Alu -2 311 37 623 147 0 0 chr5 88545090 88545192 -114540340 + AluSg/x SINE Alu 207 308 -1 477 258 47 70 chr5 88545389 88545535 -114539997 - MLT1J LTR MaLR -294 183 29 1980 75 57 0 chr5 88545688 88545953 -114539579 + AluSg SINE Alu 1 280 -30 288 0 0 0 chr5 88545953 88545985 -114539547 + (CA)n Simple_repeat Simple_repeat 1 32 0 368 311 0 0 chr5 88545996 88546086 -114539446 + L1MC4 LINE L1 6614 6703 -1339 294 29 0 0 chr5 88546093 88546128 -114539404 + (TG)n Simple_repeat Simple_repeat 2 36 0 581 106 64 0 chr5 88546262 88546356 -114539176 + FRAM SINE Alu 72 171 -5 303 300 128 44 chr5 88546365 88546615 -114538917 - L1MEd LINE L1 -5833 286 16 286 283 10 0 chr5 88546683 88546782 -114538750 + L1M4 LINE L1 3580 3679 -2467 306 0 0 0 chr5 88546783 88546817 -114538715 + (CA)n Simple_repeat Simple_repeat 1 34 0 234 213 0 0 chr5 88546859 88546906 -114538626 + MLT1K LTR MaLR 487 533 -55 2003 123 3 0 chr5 88547015 88547300 -114538232 + AluSx SINE Alu 1 286 -26 1719 171 0 3 chr5 88547336 88547635 -114537897 - AluSx SINE Alu -10 302 5 1054 226 24 24 chr5 88547649 88547945 -114537587 - L1MA9 LINE L1 -30 6282 5987 1869 137 10 0 chr5 88547978 88548270 -114537262 + AluSx SINE Alu 1 295 -17 2175 100 0 0 chr5 88548272 88548563 -114536969 + AluSq SINE Alu 1 291 -22 2248 103 0 6 chr5 88548565 88548877 -114536655 + AluSx SINE Alu 1 310 -2 474 221 86 49 chr5 88548894 88549057 -114536475 + L1M4 LINE L1 3843 4011 -2135 407 293 57 29 chr5 88549320 88549460 -114536072 - MIR3 SINE MIR -44 164 21 2074 115 0 47 chr5 88549574 88549747 -114535785 - AluSx SINE Alu -6 306 153 2330 75 0 0 chr5 88549747 88550042 -114535490 - AluY SINE Alu -16 295 1 2074 115 0 47 chr5 88550042 88550189 -114535343 - AluSx SINE Alu -159 153 1 1388 192 52 0 chr5 88550190 88550477 -114535055 - AluJo SINE Alu -10 302 1 2092 114 3 0 chr5 88550586 88550883 -114534649 - AluSx SINE Alu -14 298 1 532 283 0 8 chr5 88550993 88551113 -114534419 + MER91B DNA MER1_type 13 131 -59 1674 139 46 14 chr5 88551629 88551910 -114533622 + AluJb SINE Alu 1 290 -22 2430 201 56 104 chr5 88551913 88553016 -114532516 - L1M4 LINE L1 -3115 3267 2226 1878 145 47 0 chr5 88553016 88553312 -114532220 - AluSx SINE Alu 0 312 3 2042 120 0 7 chr5 88553322 88553621 -114531911 - AluSg SINE Alu -13 297 1 737 97 0 11 chr5 88553674 88553911 -114531621 + AluSp SINE Alu 1 296 -17 2153 158 42 16 chr5 88553912 88554291 -114531241 - MSTB1 LTR MaLR -40 392 4 389 277 0 0 chr5 88554312 88554424 -114531108 - L1M4 LINE L1 -4182 2202 2091 782 178 7 0 chr5 88554438 88554590 -114530942 + L1MA9 LINE L1 4331 4483 -1663 802 176 0 0 chr5 88554602 88554727 -114530805 + FLAM_C SINE Alu 1 125 -18 498 154 0 0 chr5 88554755 88554846 -114530686 + L1MA9 LINE L1 4486 4576 -1570 * 2888 191 21 81 chr5 88554836 88555266 -114530266 + L1MA9 LINE L1 4507 4961 -1185 1872 140 17 3 chr5 88555266 88555559 -114529973 + AluSx SINE Alu 1 297 -15 1806 116 40 0 chr5 88555567 88555843 -114529689 + AluSx SINE Alu 7 293 -19 186 43 0 0 chr5 88555847 88555870 -114529662 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2888 191 21 81 chr5 88555870 88556227 -114529305 + L1MA9 LINE L1 4971 5260 -886 2173 105 0 0 chr5 88556228 88556524 -114529008 + AluSx SINE Alu 1 296 -16 1570 165 11 77 chr5 88556647 88556704 -114528828 + L1MA9 LINE L1 5270 5329 -962 2145 104 0 3 chr5 88556704 88557003 -114528529 - AluSx SINE Alu -14 298 1 1570 165 11 77 chr5 88557003 88557308 -114528224 + L1MA9 LINE L1 5329 5608 -683 1647 180 0 11 chr5 88557308 88557637 -114527895 + AluJb SINE Alu 1 326 0 2681 142 19 15 chr5 88559091 88559557 -114525975 + L1MA9 LINE L1 5593 6060 -252 446 164 77 19 chr5 88559634 88559738 -114525794 + L1MA9 LINE L1 6181 6290 -22 1805 97 59 45 chr5 88559739 88559892 -114525640 - AluSx SINE Alu -18 294 134 2100 107 3 22 chr5 88559892 88560210 -114525322 - AluSx SINE Alu 0 312 1 1805 97 59 45 chr5 88560210 88560346 -114525186 - AluSx SINE Alu -178 134 1 923 176 12 6 chr5 88560349 88560514 -114525018 - AluJo/FRAM SINE Alu -14 298 133 1593 181 7 20 chr5 88560517 88560816 -114524716 - AluJb SINE Alu -17 295 1 578 141 0 0 chr5 88561227 88561319 -114524213 + AluSg/x SINE Alu 207 298 -12 2041 135 0 3 chr5 88561714 88562017 -114523515 - AluSx SINE Alu -10 302 1 1074 294 99 8 chr5 88562194 88562579 -114522953 - L2 LINE L2 0 3313 2894 2341 171 8 88 chr5 88562621 88562885 -114522647 + L1M4 LINE L1 5175 5459 -719 2099 115 0 0 chr5 88562885 88563194 -114522338 + AluSx SINE Alu 1 309 0 2341 171 8 88 chr5 88563194 88563571 -114521961 + L1M4 LINE L1 5459 5768 -410 1564 169 25 11 chr5 88563574 88563853 -114521679 - AluJo SINE Alu -26 286 4 570 313 125 0 chr5 88563878 88564086 -114521446 - MIR SINE MIR -6 256 23 381 275 182 0 chr5 88564100 88564347 -114521185 - L2 LINE L2 -1326 1988 1697 1509 198 3 6 chr5 88564454 88564767 -114520765 + AluJo SINE Alu 1 312 0 1156 111 37 98 chr5 88564876 88565120 -114520412 - AluSg/x SINE Alu -2 308 80 367 191 29 15 chr5 88565443 88565511 -114520021 - MER5B DNA MER1_type -3 175 107 1439 177 46 63 chr5 88565511 88565666 -114519866 - L1MC4 LINE L1 -159 7671 7515 2315 89 0 0 chr5 88565666 88565970 -114519562 - AluSq SINE Alu -9 304 1 1439 177 46 63 chr5 88565970 88566017 -114519515 - L1MC4 LINE L1 -315 7515 7469 2000 83 10 43 chr5 88566017 88566317 -114519215 + AluSc SINE Alu 1 290 -19 1439 177 46 63 chr5 88566317 88566541 -114518991 - L1MC4 LINE L1 -361 7469 7231 2800 200 28 55 chr5 88566627 88566767 -114518765 - L1MC3 LINE L1 -1629 6156 6014 2211 106 3 0 chr5 88566767 88567078 -114518454 + AluSp SINE Alu 1 312 -1 2800 200 28 55 chr5 88567078 88567258 -114518274 - L1MC3 LINE L1 -1771 6014 5831 2047 115 7 0 chr5 88567258 88567553 -114517979 + AluSx SINE Alu 1 297 -15 1977 121 10 3 chr5 88567553 88567851 -114517681 + AluSx SINE Alu 1 300 -12 2800 200 28 55 chr5 88567851 88568322 -114517210 - L1MC3 LINE L1 -1952 5833 5385 6094 68 30 41 chr5 88569788 88571591 -114513941 + SVA Other Other 4 1383 -3 27 0 0 0 chr5 88571591 88571618 -114513914 + AT_rich Low_complexity Low_complexity 1 27 0 789 217 40 40 chr5 88571619 88571817 -114513715 + MER74A LTR ERVL 296 493 -65 186 43 0 0 chr5 88571817 88571840 -114513692 + (A)n Simple_repeat Simple_repeat 1 23 0 2129 108 7 3 chr5 88572171 88572476 -114513056 - AluSq SINE Alu -7 306 1 577 164 45 15 chr5 88572479 88572613 -114512919 - L1MC3 LINE L1 -949 5395 5258 1515 113 28 0 chr5 88572627 88572840 -114512692 - MER4D LTR ERV1 0 872 654 1086 112 31 0 chr5 88572841 88573002 -114512530 + AluSg/x SINE Alu 145 310 0 675 90 14 139 chr5 88573006 88573150 -114512382 - MER4E LTR ERV1 -210 569 444 843 196 0 6 chr5 88573150 88573308 -114512224 + AluJb SINE Alu 134 290 -22 2559 132 24 40 chr5 88573308 88573437 -114512095 - MER4D LTR ERV1 -454 449 320 2140 92 13 10 chr5 88573437 88573741 -114511791 + AluSc SINE Alu 1 305 -4 2559 132 24 40 chr5 88573741 88574065 -114511467 - MER4D LTR ERV1 -583 320 3 2270 205 54 39 chr5 88574114 88574341 -114511191 - L1MC3 LINE L1 -904 5242 5020 1245 131 234 4 chr5 88574341 88574585 -114510947 - AluSx SINE Alu -12 300 1 2270 205 54 39 chr5 88574585 88574823 -114510709 - L1MC3 LINE L1 -1126 5020 4763 2021 120 3 3 chr5 88574823 88575124 -114510408 - AluSq SINE Alu -12 301 1 2270 205 54 39 chr5 88575124 88575268 -114510264 - L1MC3 LINE L1 -1383 4763 4623 868 207 51 5 chr5 88575612 88575829 -114509703 - L1MC3 LINE L1 -1509 4637 4411 549 272 44 0 chr5 88575830 88575966 -114509566 + MER82 DNA MER2_type 2 143 -510 2253 96 3 0 chr5 88576061 88576362 -114509170 - AluSx SINE Alu -10 302 1 332 191 44 15 chr5 88576457 88576525 -114509007 + MIR SINE MIR 37 106 -102 2543 35 0 25 chr5 88576617 88576936 -114508596 + AluY SINE Alu 1 311 0 351 0 0 0 chr5 88577215 88577254 -114508278 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 749 171 0 0 chr5 88577257 88577374 -114508158 - FLAM_C SINE Alu -16 117 1 22 0 0 0 chr5 88577417 88577439 -114508093 + AT_rich Low_complexity Low_complexity 1 22 0 351 219 62 0 chr5 88577545 88577641 -114507891 - L1MC4 LINE L1 -518 7524 7423 2442 169 41 56 chr5 88577643 88578180 -114507352 - LTR9 LTR ERV1 0 612 84 1902 92 0 15 chr5 88578180 88578451 -114507081 - AluSx SINE Alu -15 297 31 3394 118 205 67 chr5 88578451 88579173 -114506359 - LTR12 LTR ERV1 0 826 5 2183 201 72 11 chr5 88579189 88579732 -114505800 - pTR5 LTR ERV1 -1094 1344 769 274 73 122 0 chr5 88579742 88579783 -114505749 - AluSx SINE Alu -253 46 1 517 125 57 11 chr5 88579784 88579872 -114505660 - LTR9 LTR ERV1 -520 92 1 1330 191 64 77 chr5 88579881 88580243 -114505289 - L1MC4a LINE L1 -473 7335 6979 1972 64 6 116 chr5 88580243 88580571 -114504961 - AluSp SINE Alu -10 303 12 1330 191 64 77 chr5 88580571 88580647 -114504885 - L1MC4a LINE L1 -829 6979 6903 763 179 0 30 chr5 88580693 88580827 -114504705 + FRAM SINE Alu 1 122 -54 26 50 0 0 chr5 88580832 88580872 -114504660 + AT_rich Low_complexity Low_complexity 1 40 0 2067 76 59 0 chr5 88580873 88581163 -114504369 - AluY SINE Alu -4 307 1 1554 163 133 0 chr5 88581350 88581682 -114503850 + L1MD3 LINE L1 7610 7985 -10 2243 85 0 0 chr5 88581771 88582078 -114503454 - AluSp SINE Alu 0 307 1 1156 116 0 6 chr5 88582259 88582423 -114503109 - AluSx SINE Alu -29 283 121 7536 32 8 0 chr5 88582438 88583832 -114501700 - L1PA5 LINE L1 -5 6149 4762 3608 29 0 0 chr5 88583832 88584252 -114501280 + L1P LINE L1 3432 3851 -2295 808 156 7 0 chr5 88584255 88584390 -114501142 - AluSx SINE Alu -176 136 1 804 255 44 91 chr5 88584475 88584859 -114500673 + MLT1K LTR MaLR 215 580 -8 1614 175 0 7 chr5 88585309 88585600 -114499932 - AluJb SINE Alu -21 291 3 1095 38 0 0 chr5 88585684 88585817 -114499715 - AluY SINE Alu -13 298 166 1613 155 0 29 chr5 88585850 88586166 -114499366 + AluJb SINE Alu 1 307 -5 1793 141 47 3 chr5 88586226 88586525 -114499007 - AluJb SINE Alu 0 312 1 2168 109 3 3 chr5 88586796 88587109 -114498423 - AluSq SINE Alu 0 313 1 260 317 104 0 chr5 88587248 88587469 -114498063 + L1 LINE L1 2673 2916 -3230 226 338 28 0 chr5 88587500 88587571 -114497961 - MER91A DNA MER1_type -1 195 123 1994 143 0 6 chr5 88587968 88588282 -114497250 - AluSx SINE Alu 0 312 1 887 174 6 24 chr5 88588284 88588451 -114497081 - AluJb SINE Alu -16 296 133 643 147 0 18 chr5 88591173 88591282 -114494250 + FLAM_C SINE Alu 34 140 -3 341 51 76 25 chr5 88591557 88591636 -114493896 + T-rich Low_complexity Low_complexity 4 86 0 1922 104 10 10 chr5 88591645 88591933 -114493599 - AluSq SINE Alu -25 288 1 2385 251 83 31 chr5 88592032 88592880 -114492652 + L1MDa LINE L1 18 1249 -5291 2280 87 3 0 chr5 88592880 88593179 -114492353 + AluSp SINE Alu 1 300 -13 2385 251 83 31 chr5 88593179 88593378 -114492154 + L1MDa LINE L1 1249 1436 -5104 925 112 0 8 chr5 88593395 88593520 -114492012 + AluJo/FLAM SINE Alu 1 124 -188 1685 186 4 0 chr5 88593522 88593801 -114491731 + AluJo SINE Alu 1 280 -32 195 42 0 0 chr5 88593801 88593825 -114491707 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 669 193 129 135 chr5 88593825 88593880 -114491652 - LTR68 LTR ERV1 -416 324 270 2435 88 3 0 chr5 88593880 88594186 -114491346 - AluSp SINE Alu -2 311 5 669 193 129 135 chr5 88594186 88594456 -114491076 - LTR68 LTR ERV1 -470 270 1 2245 121 0 0 chr5 88594804 88595109 -114490423 + AluSx SINE Alu 1 305 -7 343 301 83 0 chr5 88596111 88596267 -114489265 - L1M4 LINE L1 -2873 3273 3105 242 148 0 19 chr5 88596289 88596343 -114489189 - L1MB4 LINE L1 0 6180 6128 746 208 0 8 chr5 88596369 88596499 -114489033 - FLAM_A SINE Alu 0 133 5 4442 190 37 10 chr5 88596499 88597113 -114488419 - L1MB2 LINE L1 -37 6134 5538 893 207 24 12 chr5 88597113 88597277 -114488255 - FRAM SINE Alu 0 166 1 4442 190 37 10 chr5 88597277 88597897 -114487635 - L1MB2 LINE L1 -633 5538 4862 23 24 0 24 chr5 88598273 88598293 -114487239 + AT_rich Low_complexity Low_complexity 1 20 -20 2129 131 0 13 chr5 88598293 88598606 -114486926 - AluSx SINE Alu -3 309 1 23 24 0 24 chr5 88598606 88598626 -114486906 + AT_rich Low_complexity Low_complexity 20 40 0 180 0 0 0 chr5 88598635 88598655 -114486877 + (T)n Simple_repeat Simple_repeat 1 20 0 947 86 0 0 chr5 88598812 88598955 -114486577 - AluY SINE Alu 0 309 167 1783 77 0 5 chr5 88599447 88599667 -114485865 - AluSc SINE Alu -20 289 71 * 2158 105 14 0 chr5 88599665 88599951 -114485581 - AluSp SINE Alu -17 296 7 341 87 0 0 chr5 88599952 88599998 -114485534 - AluSc SINE Alu -215 84 39 2295 77 10 7 chr5 88600111 88600411 -114485121 + AluSq SINE Alu 1 301 -12 229 104 0 42 chr5 88601259 88601307 -114484225 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 2665 184 109 79 chr5 88601899 88601994 -114483538 - L1ME2 LINE L1 -9 6155 6064 2590 56 0 3 chr5 88601994 88602300 -114483232 + AluSq SINE Alu 1 305 -8 2665 184 109 79 chr5 88602300 88602936 -114482596 - L1ME2 LINE L1 -100 6064 5386 756 164 0 57 chr5 88602936 88603076 -114482456 - FLAM_A SINE Alu -1 132 1 2665 184 109 79 chr5 88603076 88603202 -114482330 - L1ME2 LINE L1 -778 5386 5265 22 35 0 0 chr5 88603576 88603605 -114481927 + AT_rich Low_complexity Low_complexity 1 29 0 24 24 0 24 chr5 88603625 88603655 -114481877 + AT_rich Low_complexity Low_complexity 1 31 -10 1885 148 34 0 chr5 88603655 88603946 -114481586 + AluJb SINE Alu 1 301 -11 24 24 0 24 chr5 88603946 88603957 -114481575 + AT_rich Low_complexity Low_complexity 31 41 0 21 57 0 0 chr5 88604092 88604127 -114481405 + AT_rich Low_complexity Low_complexity 1 35 0 274 295 74 11 chr5 88604259 88604354 -114481178 - MIR3 SINE MIR -54 154 54 1203 148 15 15 chr5 88604439 88604635 -114480897 + AluJo SINE Alu 2 197 -115 628 156 0 0 chr5 88604636 88604752 -114480780 - AluSg/x SINE Alu 0 305 190 672 173 0 18 chr5 88604753 88604863 -114480669 + AluJo SINE Alu 187 294 -18 1220 202 32 39 chr5 88604888 88605166 -114480366 - L1MD1 LINE L1 -295 5866 5588 1752 168 36 7 chr5 88605166 88605469 -114480063 - AluJb SINE Alu 0 312 1 1220 202 32 39 chr5 88605469 88605700 -114479832 - L1MD1 LINE L1 -573 5588 5258 3105 237 54 49 chr5 88605720 88605916 -114479616 - L1MD1 LINE L1 -2016 4130 3937 2025 152 3 0 chr5 88605916 88606212 -114479320 - AluJo SINE Alu -15 297 1 3105 237 54 49 chr5 88606212 88606727 -114478805 - L1MD1 LINE L1 -2209 3937 3426 1645 140 35 28 chr5 88606727 88607012 -114478520 - AluJb SINE Alu -21 291 5 3105 237 54 49 chr5 88607012 88607350 -114478182 - L1MD1 LINE L1 -2720 3426 3071 2036 115 0 53 chr5 88607350 88607676 -114477856 - AluSx SINE Alu 0 312 1 3105 237 54 49 chr5 88607676 88607712 -114477820 - L1MD1 LINE L1 -3075 3071 3037 25 0 0 0 chr5 88607841 88607866 -114477666 + AT_rich Low_complexity Low_complexity 1 25 0 2034 121 4 0 chr5 88608037 88608345 -114477187 + AluSx SINE Alu 1 309 0 1967 148 3 0 chr5 88608354 88608657 -114476875 - AluSx SINE Alu -8 304 1 1045 177 19 106 chr5 88608658 88608771 -114476761 + AluJo SINE Alu 28 106 -206 1759 193 0 3 chr5 88608771 88609072 -114476460 + AluJb SINE Alu 1 300 -12 1045 177 19 106 chr5 88609072 88609223 -114476309 + AluJo SINE Alu 106 269 -43 489 200 14 7 chr5 88609253 88609268 -114476264 + (TA)n Simple_repeat Simple_repeat 2 15 -132 1516 166 0 4 chr5 88609268 88609515 -114476017 + AluJo SINE Alu 43 288 -24 489 200 14 7 chr5 88609515 88609644 -114475888 + (TA)n Simple_repeat Simple_repeat 15 147 0 292 342 55 25 chr5 88609958 88610157 -114475375 + L2 LINE L2 1537 1741 -1573 597 241 35 0 chr5 88610251 88610396 -114475136 - MIR SINE MIR 0 262 113 292 327 35 45 chr5 88610396 88610598 -114474934 - HAL1 LINE L1 -63 2444 2245 209 292 14 56 chr5 88610939 88611011 -114474521 - L2 LINE L2 -11 3261 3193 1514 219 48 123 chr5 88611016 88611257 -114474275 + LTR40a LTR ERVL 1 258 -261 1618 154 94 4 chr5 88611257 88611524 -114474008 + AluJb SINE Alu 1 291 -21 2289 102 3 3 chr5 88611534 88611837 -114473695 + AluSx SINE Alu 5 307 -5 1514 219 48 123 chr5 88611837 88612025 -114473507 + LTR40a LTR ERVL 267 393 -126 2263 106 0 3 chr5 88612025 88612327 -114473205 - AluSx SINE Alu -11 301 1 1514 219 48 123 chr5 88612327 88612446 -114473086 + LTR40a LTR ERVL 393 519 0 821 275 145 31 chr5 88612447 88612862 -114472670 - L2 LINE L2 -1010 2304 1843 803 182 5 30 chr5 88612970 88612985 -114472547 - MLT1B LTR MaLR -52 338 324 2231 107 7 0 chr5 88612985 88613284 -114472248 + AluSx SINE Alu 1 301 -11 803 182 5 30 chr5 88613284 88613424 -114472108 - MLT1B LTR MaLR -66 324 166 1038 158 17 28 chr5 88613606 88613783 -114471749 - FAM SINE Alu 0 175 1 828 125 0 0 chr5 88614227 88614339 -114471193 + AluSq/x SINE Alu 19 130 -183 2051 119 13 0 chr5 88614341 88614644 -114470888 + AluSx SINE Alu 1 307 -5 1453 157 41 26 chr5 88614869 88615137 -114470395 + AluJb SINE Alu 21 292 -20 2335 64 0 7 chr5 88615914 88616209 -114469323 - AluSx SINE Alu -19 293 1 1910 169 3 6 chr5 88616211 88616524 -114469008 - AluJo SINE Alu 0 312 1 2235 117 0 0 chr5 88616553 88616851 -114468681 - AluSx SINE Alu -14 298 1 2452 88 3 0 chr5 88617115 88617423 -114468109 + AluSq SINE Alu 1 309 -4 2397 67 0 3 chr5 88618415 88618715 -114466817 + AluY SINE Alu 1 299 -12 2173 99 0 0 chr5 88618884 88619167 -114466365 - AluSq SINE Alu -30 283 1 580 125 100 17 chr5 88619554 88619674 -114465858 - L1MC3 LINE L1 -164 7621 7492 204 40 0 0 chr5 88619686 88619711 -114465821 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 1991 143 27 30 chr5 88621087 88621457 -114464075 - THE1C LTR MaLR -6 369 1 3082 172 90 11 chr5 88621716 88622285 -114463247 - MER90 LTR ERV1 0 614 1 365 199 184 102 chr5 88623442 88623708 -114461824 - L1ME4a LINE L1 -22 6099 5812 253 265 241 18 chr5 88623821 88623991 -114461541 - L1ME4a LINE L1 -2018 5790 5583 825 275 91 17 chr5 88624022 88624435 -114461097 - L1ME LINE L1 -383 5738 5295 867 226 12 0 chr5 88624446 88624610 -114460922 + MER45A DNA AcHobo 1 166 -12 369 351 0 0 chr5 88626412 88626580 -114458952 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2216 102 10 0 chr5 88627317 88627611 -114457921 - AluSx SINE Alu -14 298 2 405 153 0 61 chr5 88628259 88628422 -114457110 + CT-rich Low_complexity Low_complexity 3 155 0 736 160 6 22 chr5 88629023 88629204 -114456328 + CT-rich Low_complexity Low_complexity 3 180 0 699 235 0 22 chr5 88629216 88629352 -114456180 - FLAM_C SINE Alu 0 133 1 236 157 39 0 chr5 88629372 88629423 -114456109 + (CATA)n Simple_repeat Simple_repeat 3 55 0 2101 120 3 0 chr5 88629477 88629797 -114455735 - AluSx SINE Alu 0 321 1 1810 172 10 0 chr5 88629799 88630101 -114455431 - AluJo SINE Alu -7 305 1 2158 117 3 3 chr5 88630277 88630576 -114454956 - AluSx SINE Alu -13 299 1 23 0 0 0 chr5 88631009 88631032 -114454500 + AT_rich Low_complexity Low_complexity 1 23 0 1869 152 7 14 chr5 88631032 88631328 -114454204 - AluSx SINE Alu -18 294 1 2279 97 0 0 chr5 88631407 88631725 -114453807 + AluSx SINE Alu 1 318 0 1561 157 64 15 chr5 88631881 88632038 -114453494 - AluJo SINE Alu -22 290 113 225 0 0 0 chr5 88632038 88632063 -114453469 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1561 157 64 15 chr5 88632063 88632172 -114453360 - AluJo SINE Alu -199 113 11 499 258 24 113 chr5 88632273 88632379 -114453153 - MIR SINE MIR -20 242 128 1033 198 0 0 chr5 88632379 88632546 -114452986 - FAM SINE Alu -8 167 1 6389 104 0 0 chr5 88632553 88633530 -114452002 - L1PA11 LINE L1 -5 6169 5197 878 94 0 0 chr5 88633530 88633636 -114451896 - U6 snRNA snRNA -1 106 1 499 258 24 113 chr5 88633636 88633733 -114451799 - MIR SINE MIR -138 124 49 2315 103 3 0 chr5 88634095 88634395 -114451137 - AluSg SINE Alu -9 301 1 1460 110 8 41 chr5 88634771 88635016 -114450516 + AluSg/x SINE Alu 67 303 -9 649 212 30 23 chr5 88635025 88635157 -114450375 + FLAM_C SINE Alu 1 133 0 696 272 25 32 chr5 88635275 88635562 -114449970 + L1MC2 LINE L1 5485 5830 -1978 864 105 77 7 chr5 88635562 88635705 -114449827 + L1M2 LINE L1 5573 5725 -587 29 47 0 0 chr5 88636113 88636156 -114449376 + AT_rich Low_complexity Low_complexity 1 43 0 573 112 34 0 chr5 88636156 88636245 -114449287 - L1MA6 LINE L1 -9 6291 6200 306 260 125 10 chr5 88637437 88637541 -114447991 + MIR SINE MIR 70 185 -77 1035 239 153 59 chr5 88637817 88638294 -114447238 - LTR33A LTR ERVL -1 522 1 580 294 92 8 chr5 88638650 88638888 -114446644 - L2 LINE L2 -727 2587 2330 21 0 0 0 chr5 88638924 88638945 -114446587 + AT_rich Low_complexity Low_complexity 1 21 0 313 292 42 25 chr5 88638950 88639070 -114446462 + HAL1 LINE L1 513 634 -1873 1138 79 0 0 chr5 88639161 88639301 -114446231 + AluSg SINE Alu 2 141 -169 307 154 0 0 chr5 88639301 88639353 -114446179 + Alu SINE Alu 251 302 0 273 143 0 0 chr5 88639451 88639493 -114446039 + Harlequin LTR ERV1 6855 6896 0 1756 201 42 42 chr5 88639575 88639984 -114445548 + LTR2 LTR ERV1 41 449 0 542 191 43 9 chr5 88640862 88640977 -114444555 + L1MC2 LINE L1 6220 6338 -6 198 0 0 0 chr5 88641073 88641095 -114444437 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2114 105 3 13 chr5 88641103 88641418 -114444114 - AluSx SINE Alu 0 312 1 1737 127 15 4 chr5 88641515 88641783 -114443749 - L1PA14 LINE L1 -2 6159 5889 26 0 0 27 chr5 88641847 88641867 -114443665 + AT_rich Low_complexity Low_complexity 1 21 -15 1256 159 191 20 chr5 88641867 88641998 -114443534 - AluJo SINE Alu -7 295 188 333 0 0 0 chr5 88641998 88642035 -114443497 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1256 159 191 20 chr5 88642035 88642155 -114443377 - AluJo SINE Alu -114 188 1 26 0 0 27 chr5 88642155 88642171 -114443361 + AT_rich Low_complexity Low_complexity 21 36 0 1991 130 4 4 chr5 88642228 88642525 -114443007 + AluSx SINE Alu 9 305 0 2248 106 0 3 chr5 88642737 88643038 -114442494 + AluSc SINE Alu 1 300 -9 2171 105 0 7 chr5 88643507 88643802 -114441730 - AluSx SINE Alu -19 293 1 2100 117 3 0 chr5 88643926 88644209 -114441323 + AluSx SINE Alu 1 304 0 181 0 0 0 chr5 88644209 88644229 -114441303 + (TAAA)n Simple_repeat Simple_repeat 1 156 0 700 237 13 13 chr5 88644873 88645202 -114440330 + FAM SINE Alu 1 193 0 264 257 69 76 chr5 88645248 88645392 -114440140 + MLT1H LTR MaLR 406 548 -1 21 36 0 0 chr5 88645793 88645821 -114439711 + AT_rich Low_complexity Low_complexity 1 28 0 225 260 0 0 chr5 88645900 88645950 -114439582 - L2 LINE L2 -8 3264 3215 424 268 87 27 chr5 88646102 88646285 -114439247 + Charlie8 DNA MER1_type 52 245 -2172 562 272 13 6 chr5 88646339 88646497 -114439035 + MER45A DNA AcHobo 4 162 -16 320 206 234 0 chr5 88646633 88646740 -114438792 - MER69 DNA AcHobo 0 2526 2395 1665 164 31 20 chr5 88646740 88647033 -114438499 + AluJo SINE Alu 1 296 -16 1085 145 0 0 chr5 88647343 88647516 -114438016 + AluSg/x SINE Alu 131 303 0 2085 146 7 3 chr5 88648211 88648520 -114437012 + AluSx SINE Alu 1 310 -2 1934 151 7 0 chr5 88648560 88648688 -114436844 + AluSx SINE Alu 1 127 -185 195 100 0 0 chr5 88648688 88648718 -114436814 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1934 151 7 0 chr5 88648718 88648880 -114436652 + AluSx SINE Alu 127 293 -19 1002 219 106 84 chr5 88649861 88650218 -114435314 - MLT1A1 LTR MaLR 0 365 1 269 318 93 19 chr5 88650712 88650926 -114434606 + L2 LINE L2 1936 2165 -1149 468 256 30 24 chr5 88651257 88651421 -114434111 + LTR67 LTR ERVL 383 547 -10 318 251 204 30 chr5 88651438 88651605 -114433927 + L2 LINE L2 2203 2398 -916 205 342 132 18 chr5 88651674 88651788 -114433744 - L2 LINE L2 0 3272 3146 21 36 0 0 chr5 88651859 88651887 -114433645 + AT_rich Low_complexity Low_complexity 1 28 0 430 241 71 14 chr5 88652139 88652280 -114433252 - MIR SINE MIR 0 262 114 269 268 40 45 chr5 88652345 88652543 -114432989 - HAL1 LINE L1 -130 2377 2181 229 177 258 0 chr5 88652634 88652696 -114432836 + AluY SINE Alu 216 293 -8 498 146 27 0 chr5 88652700 88652810 -114432722 + (TA)n Simple_repeat Simple_repeat 1 113 0 997 174 0 0 chr5 88652817 88652972 -114432560 + FRAM SINE Alu 1 153 -23 524 281 145 37 chr5 88652973 88653325 -114432207 - L2 LINE L2 -96 3217 2828 198 91 0 0 chr5 88653417 88653450 -114432082 + (TG)n Simple_repeat Simple_repeat 1 33 0 186 356 67 7 chr5 88653463 88653612 -114431920 - L2 LINE L2 -826 2488 2331 236 298 0 0 chr5 88653738 88653795 -114431737 - L2 LINE L2 -6 3307 3251 504 284 193 14 chr5 88653808 88654104 -114431428 - L2 LINE L2 -990 2324 1976 1930 140 0 0 chr5 88654125 88654410 -114431122 + AluJb SINE Alu 1 285 -27 1704 166 25 0 chr5 88655671 88655949 -114429583 + AluJb SINE Alu 5 289 -23 275 231 132 0 chr5 88656170 88656261 -114429271 + L1MC5 LINE L1 6971 7073 -888 2587 46 0 0 chr5 88656261 88656565 -114428967 - AluY SINE Alu -7 304 1 39536 60 6 1 chr5 88658781 88664905 -114420627 - L1PA5 LINE L1 0 6154 2 2277 98 7 0 chr5 88664909 88665204 -114420328 - AluSc SINE Alu -12 297 1 1231 197 78 123 chr5 88665308 88665342 -114420190 + L1MC5 LINE L1 7144 7178 -783 2005 124 10 20 chr5 88665342 88665648 -114419884 + AluSx SINE Alu 1 303 -9 1231 197 78 123 chr5 88665648 88666220 -114419312 + L1MC5 LINE L1 7178 7708 -253 1866 118 56 39 chr5 88666220 88666525 -114419007 - AluSx SINE Alu 0 312 3 1231 197 78 123 chr5 88666525 88666704 -114418828 + L1MC5 LINE L1 7708 7894 -67 305 197 7 106 chr5 88666716 88666858 -114418674 + L1MC5 LINE L1 7705 7832 -129 1044 283 69 11 chr5 88667003 88667363 -114418169 - MLT1I LTR MaLR -10 399 19 689 219 56 6 chr5 88667791 88667969 -114417563 - MLT1A1 LTR MaLR -17 348 162 2260 84 60 6 chr5 88667988 88668320 -114417212 - THE1A LTR MaLR -5 350 1 1088 157 39 65 chr5 88668333 88668562 -114416970 - AluJb SINE Alu -3 309 87 578 230 34 20 chr5 88668567 88668715 -114416817 - MLT1A1 LTR MaLR -215 150 1 1538 168 0 57 chr5 88669126 88669423 -114416109 + AluJo SINE Alu 1 280 -32 189 0 0 0 chr5 88669423 88669444 -114416088 + (TAA)n Simple_repeat Simple_repeat 1 21 0 197 333 107 0 chr5 88669792 88669876 -114415656 + L2 LINE L2 3148 3240 -32 21 89 0 0 chr5 88670119 88670175 -114415357 + AT_rich Low_complexity Low_complexity 1 56 0 1717 188 0 7 chr5 88670430 88670739 -114414793 + AluJb SINE Alu 3 309 -3 1123 182 25 0 chr5 88671653 88671851 -114413681 - MER20 DNA MER1_type 0 219 17 204 40 0 0 chr5 88672136 88672161 -114413371 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1582 153 12 101 chr5 88672398 88672725 -114412807 + AluJo SINE Alu 6 303 -9 430 277 191 27 chr5 88672986 88673510 -114412022 - L1ME4a LINE L1 0 6121 5512 204 281 244 0 chr5 88673787 88673869 -114411663 + L2 LINE L2 3140 3241 -31 265 313 48 0 chr5 88673883 88673966 -114411566 + MIR SINE MIR 160 246 -16 191 287 53 64 chr5 88674003 88674097 -114411435 - MIR SINE MIR -120 142 50 2287 84 0 29 chr5 88674164 88674474 -114411058 - AluSx SINE Alu -11 301 1 1964 125 0 29 chr5 88674588 88674900 -114410632 - AluJo SINE Alu -9 303 1 221 234 0 0 chr5 88675158 88675205 -114410327 + G-rich Low_complexity Low_complexity 4 50 0 233 262 63 32 chr5 88676648 88676774 -114408758 - L1ME4a LINE L1 -26 6095 5966 1247 151 105 26 chr5 88677030 88677382 -114408150 - Charlie1 DNA MER1_type -39 2722 2343 294 261 0 0 chr5 88677380 88677445 -114408087 - Charlie1 DNA MER1_type -2690 71 7 * 369 313 85 23 chr5 88677450 88677626 -114407906 - L1ME4a LINE L1 -398 5772 5586 361 291 77 54 chr5 88677831 88678092 -114407440 - L1ME LINE L1 -474 5647 5381 2257 91 3 0 chr5 88678203 88678499 -114407033 - AluSc SINE Alu -12 297 1 2220 68 3 89 chr5 88678574 88678912 -114406620 - AluSc SINE Alu 0 309 1 365 313 33 28 chr5 88678978 88679160 -114406372 - L1ME4a LINE L1 -91 6030 5848 654 303 108 33 chr5 88679243 88679591 -114405941 + L2 LINE L2 2149 2540 -774 765 181 0 8 chr5 88679591 88679724 -114405808 - FLAM_A SINE Alu -1 132 1 654 303 108 33 chr5 88679724 88679827 -114405705 + L2 LINE L2 2540 2634 -680 24 32 0 0 chr5 88679926 88679957 -114405575 + AT_rich Low_complexity Low_complexity 1 31 0 1262 229 79 104 chr5 88680454 88680526 -114405006 - HAL1 LINE L1 -1 2506 2434 1809 159 3 7 chr5 88680526 88680816 -114404716 + AluJo SINE Alu 3 291 -21 2487 83 3 3 chr5 88680821 88681134 -114404398 + AluSp SINE Alu 1 313 0 1262 229 79 104 chr5 88681134 88681188 -114404344 - HAL1 LINE L1 -77 2430 2376 1090 206 0 0 chr5 88681188 88681392 -114404140 - MER105 DNA DNA 0 204 1 1262 229 79 104 chr5 88681392 88682183 -114403349 - HAL1 LINE L1 -131 2376 1605 510 262 12 102 chr5 88682230 88682486 -114403046 - L2 LINE L2 -4 3309 3077 805 217 151 13 chr5 88682521 88682825 -114402707 - HAL1 LINE L1 -1069 1438 1093 * 9495 156 73 80 chr5 88682819 88683303 -114402229 - L1MC3 LINE L1 0 7785 7299 2414 81 0 0 chr5 88683303 88683598 -114401934 - AluSg SINE Alu -15 295 1 9495 156 73 80 chr5 88683598 88683880 -114401652 - L1MC3 LINE L1 -486 7299 7017 2482 75 3 0 chr5 88683880 88684187 -114401345 - AluSx SINE Alu -4 308 1 9495 156 73 80 chr5 88684187 88685928 -114399604 - L1MC3 LINE L1 -768 7017 5293 457 189 40 14 chr5 88685949 88686097 -114399435 + CT-rich Low_complexity Low_complexity 1 152 0 1726 193 0 3 chr5 88686103 88686393 -114399139 - AluJo SINE Alu -23 289 1 2093 234 62 2 chr5 88686398 88686844 -114398688 - L1MC3 LINE L1 -841 5305 4810 1672 160 6 26 chr5 88686844 88687156 -114398376 - AluJb SINE Alu -6 306 1 2093 234 62 2 chr5 88687156 88687323 -114398209 - L1MC3 LINE L1 -1336 4810 4655 1023 93 0 0 chr5 88687326 88687455 -114398077 - AluSg SINE Alu -181 129 1 305 317 0 8 chr5 88687455 88687578 -114397954 - L1MC3 LINE L1 -1476 4670 4549 2463 85 0 0 chr5 88687581 88687888 -114397644 - AluSg SINE Alu -3 307 1 1249 140 11 0 chr5 88687888 88688067 -114397465 - AluSg/x SINE Alu -15 295 115 9174 192 40 28 chr5 88688080 88690291 -114395241 - L1PA5 LINE L1 -7 6147 3963 2209 102 0 13 chr5 88690291 88690594 -114394938 - AluSg SINE Alu -11 299 1 9174 192 40 28 chr5 88690594 88691372 -114394160 - L1PA5 LINE L1 -2191 3963 3195 2291 91 0 10 chr5 88691372 88691679 -114393853 - AluY SINE Alu -7 304 1 9174 192 40 28 chr5 88691679 88691774 -114393758 - L1PA5 LINE L1 -2959 3195 3103 2133 101 0 4 chr5 88691774 88692051 -114393481 - AluSq SINE Alu 0 313 38 9174 192 40 28 chr5 88692051 88692127 -114393405 - L1PA5 LINE L1 -3051 3103 2962 332 201 79 47 chr5 88692128 88692308 -114393224 - HAL1 LINE L1 -1404 1103 913 2173 139 0 0 chr5 88692308 88692603 -114392929 - AluSx SINE Alu -17 295 1 332 201 79 47 chr5 88692603 88692636 -114392896 - HAL1 LINE L1 -1594 913 883 446 297 80 16 chr5 88692902 88693151 -114392381 - L1MEd LINE L1 -4881 1238 974 203 240 132 47 chr5 88693330 88693459 -114392073 + MER5C DNA MER1_type 185 324 0 295 232 95 30 chr5 88693459 88693627 -114391905 - L1MC5 LINE L1 -524 7437 7259 309 283 39 22 chr5 88693719 88693899 -114391633 - L1MC5 LINE L1 -731 7230 7048 278 229 29 0 chr5 88693954 88694024 -114391508 + L1M4 LINE L1 4511 4582 -1564 662 24 12 0 chr5 88694031 88694115 -114391417 + (TG)n Simple_repeat Simple_repeat 2 86 0 198 0 0 0 chr5 88694114 88694136 -114391396 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 360 86 35 0 chr5 88694142 88694200 -114391332 - L1PA10 LINE L1 -15 6153 6094 2757 81 115 48 chr5 88694311 88694765 -114390767 - L1PA10 LINE L1 -310 5858 5367 842 111 0 15 chr5 88694765 88694900 -114390632 - FLAM_C SINE Alu 0 133 1 2757 81 115 48 chr5 88694900 88694942 -114390590 - L1PA10 LINE L1 -801 5367 5329 231 220 82 75 chr5 88694943 88695257 -114390275 - L1MC4 LINE L1 -902 7059 6766 381 197 7 73 chr5 88695257 88695394 -114390138 - L1M4 LINE L1 -2907 3239 3112 2061 120 19 10 chr5 88695414 88695722 -114389810 + AluSx SINE Alu 1 311 -1 735 44 0 0 chr5 88695731 88695821 -114389711 + L1PA5 LINE L1 11 100 -6046 * 35484 52 6 3 chr5 88695817 88701320 -114384212 + L1PA5 LINE L1 623 6148 -6 350 216 6 102 chr5 88701434 88701601 -114383931 - L1M4 LINE L1 -3124 3022 2872 207 0 0 0 chr5 88702189 88702212 -114383320 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1516 198 32 0 chr5 88702214 88702492 -114383040 - AluJo SINE Alu -25 287 1 2162 119 0 13 chr5 88702575 88702751 -114382781 - AluSq SINE Alu -4 309 137 1641 93 0 90 chr5 88702751 88703085 -114382447 - AluSg SINE Alu -6 304 1 2162 119 0 13 chr5 88703085 88703219 -114382313 - AluSq SINE Alu -176 137 3 1664 184 0 26 chr5 88703323 88703627 -114381905 - AluJo SINE Alu -16 296 1 477 179 11 0 chr5 88703732 88703827 -114381705 + THE1C LTR MaLR 199 294 -81 411 283 86 43 chr5 88704164 88704351 -114381181 - L2 LINE L2 -1 3312 3118 423 0 0 0 chr5 88708407 88708454 -114377078 + (TG)n Simple_repeat Simple_repeat 1 47 0 1029 293 74 49 chr5 88709671 88709859 -114375673 - L2 LINE L2 -43 3270 3088 1885 168 0 13 chr5 88709859 88710157 -114375375 - AluSx SINE Alu -18 294 1 1029 293 74 49 chr5 88710157 88710599 -114374933 - L2 LINE L2 -225 3088 2629 427 250 124 16 chr5 88711098 88711390 -114374142 - LTR33A LTR ERVL -6 517 323 338 293 71 25 chr5 88711484 88711682 -114373850 - LTR50 LTR ERVL -583 212 6 23 33 0 0 chr5 88711733 88711763 -114373769 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 88712484 88712519 -114373013 + AT_rich Low_complexity Low_complexity 1 35 0 800 207 14 0 chr5 88713331 88713476 -114372056 - FRAM SINE Alu -30 146 1 652 232 0 14 chr5 88713500 88713642 -114371890 - FLAM_A SINE Alu -2 140 1 2290 92 17 3 chr5 88713652 88713947 -114371585 - AluSq SINE Alu -14 299 1 1407 169 77 16 chr5 88713984 88714350 -114371182 - Charlie1 DNA MER1_type -4 2757 2370 417 184 23 23 chr5 88714321 88714408 -114371124 - Charlie1 DNA MER1_type -2670 91 5 * 194 337 58 0 chr5 88714642 88714728 -114370804 - L2 LINE L2 -1 3271 3181 2178 106 3 19 chr5 88714730 88715041 -114370491 + AluSx SINE Alu 1 306 -6 26 30 0 0 chr5 88716167 88716200 -114369332 + AT_rich Low_complexity Low_complexity 1 33 0 360 292 124 31 chr5 88716489 88716650 -114368882 + MIR3 SINE MIR 21 196 -12 2194 118 24 0 chr5 88718565 88718862 -114366670 - AluSx SINE Alu -8 304 1 1029 185 48 35 chr5 88719729 88719903 -114365629 - MER46A DNA MER2_type -2495 236 57 2323 101 3 0 chr5 88719903 88720211 -114365321 + AluSx SINE Alu 1 309 -3 1029 185 48 35 chr5 88720211 88720263 -114365269 - MER46A DNA MER2_type -2674 57 7 190 254 79 16 chr5 88721695 88721758 -114363774 + L3 LINE CR1 1509 1575 -2 452 95 5 187 chr5 88722327 88722696 -114362836 - AluSq SINE Alu -11 302 1 452 303 119 5 chr5 88722932 88723117 -114362415 + MIR SINE MIR 30 235 -27 2334 117 0 0 chr5 88723155 88723453 -114362079 + AluSx SINE Alu 1 298 -14 378 234 126 9 chr5 88724016 88724127 -114361405 + MIR3 SINE MIR 85 208 0 22 0 0 0 chr5 88725503 88725525 -114360007 + AT_rich Low_complexity Low_complexity 1 22 0 241 184 238 81 chr5 88725571 88725649 -114359883 - L1ME4a LINE L1 0 6121 6057 2331 75 3 26 chr5 88725649 88725957 -114359575 + AluY SINE Alu 1 301 -10 241 184 238 81 chr5 88725957 88726101 -114359431 - L1ME4a LINE L1 -64 6057 5864 325 111 14 69 chr5 88726206 88726263 -114359269 + AluJ/FRAM SINE Alu 225 284 -18 258 32 0 0 chr5 88726263 88726294 -114359238 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1135 122 11 0 chr5 88726295 88726484 -114359048 + L1MA7 LINE L1 6101 6291 0 325 111 14 69 chr5 88726484 88726496 -114359036 + AluJ/FRAM SINE Alu 283 292 -10 210 182 0 0 chr5 88726516 88726549 -114358983 + MIR3 SINE MIR 151 183 -25 2126 160 54 46 chr5 88726595 88727095 -114358437 + L1MB7 LINE L1 5666 6169 -15 1203 159 100 33 chr5 88727114 88727385 -114358147 - AluJo SINE Alu -23 289 1 297 0 0 0 chr5 88727444 88727477 -114358055 + (TG)n Simple_repeat Simple_repeat 2 34 0 2295 73 10 3 chr5 88727553 88727854 -114357678 - AluY SINE Alu -8 303 1 237 257 57 0 chr5 88728538 88728643 -114356889 + L1ME4a LINE L1 5979 6089 -32 1897 116 0 4 chr5 88729834 88730110 -114355422 + AluSx SINE Alu 1 275 -37 234 0 0 0 chr5 88730113 88730139 -114355393 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2965 160 67 33 chr5 88730458 88731254 -114354278 - L1MB8 LINE L1 -161 6017 5183 2397 74 0 7 chr5 88731290 88731588 -114353944 - AluSx SINE Alu -16 296 1 988 94 29 24 chr5 88731589 88731759 -114353773 - L1PA13 LINE L1 0 6163 5993 1611 147 0 26 chr5 88731860 88732125 -114353407 - AluJo SINE Alu -52 260 3 1764 150 26 40 chr5 88732126 88732505 -114353027 - L1MA7 LINE L1 -193 6098 5725 512 217 26 0 chr5 88732505 88732620 -114352912 - MER58B DNA MER1_type -1 340 223 416 175 31 31 chr5 88732628 88732725 -114352807 + L1MC2 LINE L1 5991 6087 -257 3071 137 31 111 chr5 88732725 88733275 -114352257 + Tigger1 DNA MER2_type 1 480 -1938 1845 176 3 3 chr5 88733275 88733577 -114351955 + AluJo SINE Alu 1 302 -10 3071 137 31 111 chr5 88733577 88733756 -114351776 + Tigger1 DNA MER2_type 480 672 -1746 3765 109 75 22 chr5 88733756 88734720 -114350812 + MER11A LTR ERVK 1 1266 0 * 10121 125 29 21 chr5 88734720 88735022 -114350510 + Tigger1 DNA MER2_type 667 965 -1453 1879 145 0 3 chr5 88735022 88735418 -114350114 - AluJb SINE Alu 0 395 1 10121 125 29 21 chr5 88735418 88736153 -114349379 + Tigger1 DNA MER2_type 965 1728 -690 2477 64 3 6 chr5 88736153 88736464 -114349068 + AluY SINE Alu 1 310 -1 10121 125 29 21 chr5 88736464 88737160 -114348372 + Tigger1 DNA MER2_type 1728 2417 -1 806 134 21 0 chr5 88737162 88737304 -114348228 + L1MC2 LINE L1 6087 6231 -113 239 188 50 75 chr5 88737358 88737404 -114348128 + L1MC2 LINE L1 6240 6285 -59 2425 106 0 0 chr5 88737404 88737715 -114347817 - AluSx SINE Alu -1 311 1 239 188 50 75 chr5 88737715 88737748 -114347784 + L1MC2 LINE L1 6285 6317 -27 1897 153 36 0 chr5 88737748 88738049 -114347483 + AluSx SINE Alu 1 312 0 1411 23 0 0 chr5 88738364 88738563 -114346969 + L1PA5 LINE L1 5959 6157 0 25 31 0 0 chr5 88740066 88740098 -114345434 + AT_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr5 88740307 88740354 -114345178 + AT_rich Low_complexity Low_complexity 1 47 0 2020 209 16 5 chr5 88740473 88740914 -114344618 + L1MA9 LINE L1 5612 6057 -255 2090 104 0 17 chr5 88741610 88741922 -114343610 - AluSx SINE Alu 0 307 1 564 228 118 24 chr5 88742087 88742258 -114343274 + L1MA9 LINE L1 6044 6240 -72 186 71 0 0 chr5 88742258 88742286 -114343246 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 564 228 118 24 chr5 88742286 88742325 -114343207 + L1MA9 LINE L1 6240 6274 -38 538 211 0 0 chr5 88742651 88742786 -114342746 - FRAM SINE Alu 0 192 58 22 0 0 0 chr5 88743073 88743095 -114342437 + AT_rich Low_complexity Low_complexity 1 22 0 333 350 39 0 chr5 88743425 88743528 -114342004 + L2 LINE L2 3203 3309 -4 816 184 76 22 chr5 88743561 88743746 -114341786 + L1MB7 LINE L1 5969 6163 -21 279 269 46 55 chr5 88743752 88743890 -114341642 + L1M4 LINE L1 4158 4295 -1851 2072 143 3 10 chr5 88743890 88744204 -114341328 + AluJo SINE Alu 1 312 0 279 269 46 55 chr5 88744204 88744284 -114341248 + L1M4 LINE L1 4295 4374 -1772 770 337 55 37 chr5 88744604 88744987 -114340545 + L2 LINE L2 2239 2628 -686 2112 93 4 0 chr5 88745117 88745395 -114340137 - AluSc SINE Alu -5 304 26 611 140 215 0 chr5 88745794 88745901 -114339631 - FLAM_C SINE Alu -12 131 2 2537 66 0 0 chr5 88745994 88746296 -114339236 - AluY SINE Alu -9 302 1 2258 111 0 3 chr5 88746352 88746658 -114338874 - AluSg SINE Alu -5 305 1 391 327 114 25 chr5 88746797 88747136 -114338396 + MLT1L LTR MaLR 214 604 -11 337 196 10 93 chr5 88747154 88747251 -114338281 + L2 LINE L2 2626 2714 -600 1884 104 112 4 chr5 88747471 88747740 -114337792 + AluSc SINE Alu 1 298 -11 2214 127 0 0 chr5 88748001 88748301 -114337231 + AluSx SINE Alu 1 300 -12 382 296 68 17 chr5 88748431 88748607 -114336925 + L2 LINE L2 2877 3061 -211 2780 156 26 16 chr5 88748633 88749177 -114336355 - L1MB7 LINE L1 -278 5906 5358 21 0 0 0 chr5 88749308 88749329 -114336203 + AT_rich Low_complexity Low_complexity 1 21 0 944 208 86 40 chr5 88749536 88749580 -114335952 + MSTD LTR MaLR 1 42 -354 1870 130 3 27 chr5 88749580 88749872 -114335660 - AluJo SINE Alu -19 293 9 944 208 86 40 chr5 88749872 88750168 -114335364 + MSTD LTR MaLR 42 396 0 420 274 0 0 chr5 88750340 88750442 -114335090 - MLT1-int LTR MaLR -848 523 422 727 234 163 74 chr5 88750690 88751108 -114334424 - MLT1H1 LTR MaLR -8 547 93 576 140 26 26 chr5 88751117 88751231 -114334301 + Ricksha DNA DNA 9 122 -1132 * 6458 153 25 19 chr5 88751210 88751791 -114333741 + Ricksha DNA DNA 1710 2286 -960 1600 158 143 8 chr5 88751791 88752057 -114333475 + AluJo SINE Alu 1 302 0 6458 153 25 19 chr5 88752057 88752216 -114333316 + Ricksha DNA DNA 2286 2442 -804 2176 113 0 3 chr5 88752216 88752508 -114333024 - AluSx SINE Alu -21 291 1 6458 153 25 19 chr5 88752508 88753102 -114332430 + Ricksha DNA DNA 2442 3086 -160 1741 165 16 32 chr5 88753102 88753411 -114332121 + AluJo SINE Alu 6 309 -3 6458 153 25 19 chr5 88753411 88753560 -114331972 + Ricksha DNA DNA 3086 3233 -13 265 261 43 0 chr5 88753966 88754058 -114331474 + MIR SINE MIR 73 168 -94 2089 116 0 0 chr5 88754794 88755124 -114330408 + AluSq SINE Alu 1 330 0 2230 86 3 10 chr5 88755559 88755875 -114329657 + AluSq SINE Alu 1 313 0 404 235 60 60 chr5 88755885 88756034 -114329498 - MIR3 SINE MIR -39 169 21 755 293 65 8 chr5 88756288 88756534 -114328998 - MIR SINE MIR 0 262 3 340 239 72 56 chr5 88756756 88756936 -114328596 + L1MC5 LINE L1 7755 7937 -24 193 171 49 0 chr5 88757032 88757073 -114328459 - L2 LINE L2 -3155 159 117 1676 157 39 3 chr5 88757073 88757359 -114328173 + AluJo SINE Alu 1 296 -16 180 321 36 0 chr5 88757369 88757425 -114328107 - L3 LINE CR1 -155 1422 1365 * 261 289 100 0 chr5 88757418 88757508 -114328024 + MIR SINE MIR 54 152 -110 884 191 13 19 chr5 88757520 88757715 -114327817 + FAM SINE Alu 1 59 0 2578 250 86 69 chr5 88757720 88757915 -114327617 - L1MDb LINE L1 -3908 2813 2623 1831 149 17 23 chr5 88757915 88758216 -114327316 + AluSx SINE Alu 1 299 -13 2578 250 86 69 chr5 88758216 88758259 -114327273 - L1MDb LINE L1 -4098 2623 2582 1711 191 3 7 chr5 88758259 88758558 -114326974 - AluJo SINE Alu -14 298 1 2578 250 86 69 chr5 88758558 88759115 -114326417 - L1MDb LINE L1 -4139 2582 2036 2080 121 6 16 chr5 88759115 88759429 -114326103 + AluSx SINE Alu 1 311 -1 2578 250 86 69 chr5 88759429 88760163 -114325369 - L1MDb LINE L1 -4685 2036 1224 2007 140 20 3 chr5 88760163 88760463 -114325069 + AluSx SINE Alu 1 305 -7 2578 250 86 69 chr5 88760463 88760766 -114324766 - L1MDb LINE L1 -5497 1224 927 291 306 9 27 chr5 88761240 88761351 -114324181 - L1MDb LINE L1 -6185 355 247 1395 165 93 4 chr5 88761362 88761641 -114323891 - AluJo SINE Alu -8 304 1 358 308 73 6 chr5 88761641 88762009 -114323523 - L1MEd LINE L1 -4862 1257 895 28 29 0 0 chr5 88765167 88765202 -114320330 + AT_rich Low_complexity Low_complexity 1 35 0 254 188 141 12 chr5 88765738 88765823 -114319709 + L1MC4a LINE L1 5343 5438 -2370 822 181 0 22 chr5 88765823 88765961 -114319571 + AluJo SINE Alu 2 136 -176 753 262 206 78 chr5 88765968 88766047 -114319485 + L1MC4a LINE L1 5435 5503 -2305 1906 128 32 4 chr5 88766047 88766328 -114319204 + AluSx SINE Alu 1 289 -23 753 262 206 78 chr5 88766328 88766836 -114318696 + L1MC4a LINE L1 5503 6097 -1711 208 250 0 21 chr5 88766838 88766886 -114318646 + MER91B DNA MER1_type 25 71 -119 1078 235 32 5 chr5 88767078 88767295 -114318237 + MER58A DNA MER1_type 2 224 0 328 167 136 15 chr5 88768174 88768240 -114317292 - Tigger8 DNA MER2_type -461 205 132 24 0 0 0 chr5 88769275 88769299 -114316233 + AT_rich Low_complexity Low_complexity 1 24 0 486 246 64 21 chr5 88769715 88769902 -114315630 + L1MEc LINE L1 762 956 -6182 276 241 118 53 chr5 88770488 88770563 -114314969 + L1MEc LINE L1 1326 1395 -5552 7868 38 28 0 chr5 88770563 88771436 -114314096 - MER11D LTR ERVK 0 897 1 276 241 118 53 chr5 88771436 88771475 -114314057 + L1MEc LINE L1 1395 1430 -5517 1939 158 3 0 chr5 88771475 88771773 -114313759 + AluJo SINE Alu 1 299 -13 276 241 118 53 chr5 88771773 88771885 -114313647 + L1MEc LINE L1 1430 1650 -5297 2441 77 0 0 chr5 88771887 88772184 -114313348 + AluY SINE Alu 3 299 -12 450 127 0 0 chr5 88772185 88772256 -114313276 + (CA)n Simple_repeat Simple_repeat 2 72 0 600 274 15 21 chr5 88772296 88772606 -114312926 + L1MEc LINE L1 1636 1945 -5004 817 157 0 8 chr5 88772743 88772864 -114312668 + FLAM_C SINE Alu 2 121 -22 1643 161 15 56 chr5 88772880 88773204 -114312328 + AluJb SINE Alu 1 311 -1 459 256 135 17 chr5 88773354 88773651 -114311881 + L1M4 LINE L1 4117 4448 -1698 2200 171 12 3 chr5 88773667 88774011 -114311521 + MER7A DNA MER2_type 2 346 0 315 326 11 5 chr5 88774040 88774224 -114311308 + L1M4 LINE L1 4524 4708 -1438 254 188 0 21 chr5 88774232 88774280 -114311252 - AluSc SINE Alu -112 187 141 5103 227 67 22 chr5 88774280 88775577 -114309955 - L1M4 LINE L1 -5186 1356 1 2725 230 102 54 chr5 88775620 88776064 -114309468 + L1ME3A LINE L1 819 1240 -5323 2045 129 3 3 chr5 88776064 88776359 -114309173 + AluSq SINE Alu 5 299 -14 2725 230 102 54 chr5 88776359 88776577 -114308955 + L1ME3A LINE L1 1240 1446 -5117 1940 158 3 19 chr5 88776577 88776894 -114308638 + AluJo SINE Alu 1 312 0 2725 230 102 54 chr5 88776894 88777556 -114307976 + L1ME3A LINE L1 1446 2354 -4209 616 220 48 0 chr5 88777554 88777740 -114307792 + L1ME3A LINE L1 3449 3643 -2739 * 2498 101 41 22 chr5 88777742 88778110 -114307422 + THE1C LTR MaLR 1 375 0 11488 98 21 29 chr5 88778110 88779703 -114305829 + THE1C-int LTR MaLR 1 1580 0 2503 108 13 51 chr5 88779703 88780093 -114305439 + THE1C LTR MaLR 1 375 0 1641 173 96 44 chr5 88780149 88780294 -114305238 + MLT1B LTR MaLR 4 140 -250 1848 117 44 4 chr5 88780294 88780592 -114304940 - AluSq SINE Alu 0 309 1 1641 173 96 44 chr5 88780592 88780810 -114304722 + MLT1B LTR MaLR 140 387 -3 311 157 176 46 chr5 88780850 88781003 -114304529 + L1MC5 LINE L1 7504 7676 -285 1320 170 9 13 chr5 88781007 88781236 -114304296 - MER46A DNA MER2_type -8 228 1 391 264 31 25 chr5 88781312 88781471 -114304061 + L1MC5 LINE L1 7772 7931 -30 456 285 88 53 chr5 88781475 88781871 -114303661 + L1ME3A LINE L1 4988 5397 -985 877 298 50 13 chr5 88781912 88782295 -114303237 + L1ME3A LINE L1 5499 5895 -503 268 347 59 0 chr5 88782316 88782535 -114302997 + L1ME3A LINE L1 5967 6198 -208 23 36 0 54 chr5 88783028 88783058 -114302474 + AT_rich Low_complexity Low_complexity 1 28 -25 2211 111 10 0 chr5 88783058 88783356 -114302176 + AluSx SINE Alu 1 301 -11 23 36 0 54 chr5 88783356 88783381 -114302151 + AT_rich Low_complexity Low_complexity 28 53 0 966 301 98 30 chr5 88783417 88784052 -114301480 + L1MC4a LINE L1 5494 6171 -1637 275 242 16 0 chr5 88784177 88784194 -114301338 + MER3 DNA MER1_type 31 48 -161 330 164 0 75 chr5 88784194 88784261 -114301271 - MER3 DNA MER1_type -1 208 147 842 171 0 0 chr5 88784264 88784393 -114301139 - FLAM_C SINE Alu -4 129 1 335 287 67 45 chr5 88784829 88785052 -114300480 + L1MC4a LINE L1 7427 7654 -154 326 294 182 68 chr5 88785378 88785773 -114299759 - L1M2 LINE L1 -5501 1348 909 2688 158 2 5 chr5 88785780 88786210 -114299322 + LTR3 LTR ERVK 1 429 0 39671 180 16 16 chr5 88786226 88790365 -114295167 + HERVK3 LTR ERVK 68 4204 -3039 8159 57 27 12 chr5 88790365 88791357 -114294175 - LTR13 LTR ERVK 0 1007 1 39671 180 16 16 chr5 88791357 88793410 -114292122 + HERVK3 LTR ERVK 4204 6255 -988 2137 90 0 24 chr5 88793410 88793699 -114291833 - AluSg1 SINE Alu -27 282 1 39671 180 16 16 chr5 88793699 88794453 -114291079 + HERVK3 LTR ERVK 6255 7054 -189 2510 69 0 3 chr5 88794453 88794759 -114290773 + AluY SINE Alu 1 305 -6 39671 180 16 16 chr5 88794759 88794949 -114290583 + HERVK3 LTR ERVK 7054 7242 -1 2610 159 9 5 chr5 88794949 88795376 -114290156 + LTR3 LTR ERVK 1 429 0 1859 163 39 6 chr5 88795435 88795797 -114289735 - L1MB7 LINE L1 -154 6030 5657 379 212 60 86 chr5 88796469 88796503 -114289029 - MER58 DNA MER1_type -4 2416 2383 2031 123 31 3 chr5 88796503 88796795 -114288737 + AluSp SINE Alu 1 300 -13 379 212 60 86 chr5 88796795 88796911 -114288621 - MER58 DNA MER1_type -37 2383 2270 2152 133 3 0 chr5 88797410 88797710 -114287822 + AluSq SINE Alu 1 301 -12 239 236 18 0 chr5 88797753 88797784 -114287748 + MER3 DNA MER1_type 16 47 -162 558 254 188 0 chr5 88797784 88797949 -114287583 - MER3 DNA MER1_type 0 209 14 285 274 111 8 chr5 88798058 88798175 -114287357 + MIR SINE MIR 53 181 -81 327 294 84 0 chr5 88798839 88798958 -114286574 - MIR SINE MIR -81 181 53 2425 75 10 7 chr5 88801058 88801366 -114284166 - AluSg1 SINE Alu 0 309 1 380 317 63 0 chr5 88801596 88801738 -114283794 - MIR SINE MIR -34 228 78 1832 196 129 5 chr5 88802111 88802545 -114282987 - MER77 LTR ERV1 -5 600 113 595 259 106 68 chr5 88802636 88802976 -114282556 + MLT1H LTR MaLR 1 353 -196 181 259 62 12 chr5 88803549 88803630 -114281902 + L2 LINE L2 1711 1795 -1519 2206 109 12 68 chr5 88803665 88803997 -114281535 + MLT1B LTR MaLR 2 308 -82 2339 63 0 73 chr5 88803997 88804314 -114281218 - AluY SINE Alu -17 294 1 2206 109 12 68 chr5 88804314 88804393 -114281139 + MLT1B LTR MaLR 308 390 0 612 259 82 61 chr5 88804424 88804495 -114281037 + L2 LINE L2 2438 2506 -808 1383 90 90 5 chr5 88804495 88804707 -114280825 - MER30 DNA MER1_type 0 230 1 612 259 82 61 chr5 88804707 88804978 -114280554 + L2 LINE L2 2506 2787 -527 891 158 0 0 chr5 88804982 88805115 -114280417 + FLAM_C SINE Alu 1 133 -10 182 286 218 27 chr5 88805140 88805360 -114280172 + L2 LINE L2 2804 3065 -248 191 344 74 25 chr5 88805360 88805482 -114280050 + L2 LINE L2 3181 3308 -5 2453 93 21 44 chr5 88806236 88806622 -114278910 - MER51B LTR ERV1 0 377 1 227 222 17 91 chr5 88806622 88806798 -114278734 + C-rich Low_complexity Low_complexity 6 168 0 223 254 30 36 chr5 88807387 88807552 -114277980 + (CGGA)n Simple_repeat Simple_repeat 1 164 0 2299 100 0 0 chr5 88807968 88808259 -114277273 - AluSx SINE Alu -21 291 1 404 246 26 18 chr5 88808550 88808664 -114276868 - MIR SINE MIR -1 261 147 1489 112 39 19 chr5 88809722 88809980 -114275552 + Tigger7 DNA MER2_type 2227 2489 -2 677 157 0 0 chr5 88809996 88810104 -114275428 + L1M4 LINE L1 5499 5606 -578 2332 88 0 7 chr5 88810115 88810411 -114275121 + AluY SINE Alu 1 294 -17 372 310 44 32 chr5 88810473 88810631 -114274901 - L1ME LINE L1 -470 5651 5492 273 385 144 0 chr5 88810684 88810879 -114274653 + MIR SINE MIR 40 262 0 210 296 0 0 chr5 88811003 88811057 -114274475 + L2 LINE L2 3255 3308 -5 * 370 261 112 48 chr5 88811051 88811239 -114274293 - L2 LINE L2 -12 3301 3102 2334 107 0 0 chr5 88811324 88811623 -114273909 - AluSg SINE Alu -11 299 1 2236 82 14 7 chr5 88811627 88811953 -114273579 - AluSc SINE Alu 0 328 1 2236 113 10 0 chr5 88811977 88812279 -114273253 - AluSp SINE Alu -8 305 1 376 234 11 11 chr5 88812279 88812373 -114273159 - L1MB7 LINE L1 -123 6061 5968 2371 98 0 3 chr5 88812377 88812683 -114272849 - AluSx SINE Alu -7 305 1 3060 166 43 3 chr5 88812683 88813458 -114272074 - L1MB7 LINE L1 -291 5893 5081 1353 239 19 26 chr5 88813457 88813670 -114271862 + L1M4 LINE L1 2684 2894 -3252 * 2169 123 3 13 chr5 88813670 88813980 -114271552 + AluSx SINE Alu 1 307 -5 1353 239 19 26 chr5 88813980 88814188 -114271344 + L1M4 LINE L1 2894 3102 -3044 452 231 47 118 chr5 88814283 88814418 -114271114 + MIR SINE MIR 45 161 -101 1788 79 0 9 chr5 88814418 88814645 -114270887 - AluY SINE Alu -5 306 82 452 231 47 118 chr5 88814645 88814721 -114270811 + MIR SINE MIR 161 241 -21 504 269 159 55 chr5 88815455 88815712 -114269820 - MLT1K LTR MaLR -5 583 300 453 244 93 21 chr5 88816233 88816375 -114269157 + MIR SINE MIR 100 250 -12 350 222 35 113 chr5 88816655 88816856 -114268676 + MIR SINE MIR 4 192 -69 198 314 107 0 chr5 88817343 88817464 -114268068 - L2 LINE L2 0 3272 3139 276 335 152 11 chr5 88820046 88820309 -114265223 + L2 LINE L2 2461 2760 -554 333 290 154 70 chr5 88820440 88820573 -114264959 + L2 LINE L2 2833 2953 -319 2655 50 0 28 chr5 88820573 88820892 -114264640 - AluY SINE Alu -1 310 1 333 290 154 70 chr5 88820892 88821161 -114264371 + L2 LINE L2 2953 3269 -3 195 311 109 25 chr5 88821889 88822008 -114263524 + MIR SINE MIR 20 148 -114 290 233 93 0 chr5 88822302 88822388 -114263144 - MIR SINE MIR -115 147 54 363 329 46 25 chr5 88822485 88822768 -114262764 + L1M4 LINE L1 2215 2503 -3643 947 111 30 0 chr5 88822823 88822958 -114262574 + AluSg SINE Alu 1 139 -171 1985 131 7 13 chr5 88822962 88823096 -114262436 + AluSc SINE Alu 1 134 -175 2458 86 0 3 chr5 88823096 88823397 -114262135 + AluSg SINE Alu 1 300 -10 1985 131 7 13 chr5 88823397 88823560 -114261972 + AluSc SINE Alu 134 296 -13 2256 102 27 0 chr5 88823560 88823853 -114261679 + AluSq SINE Alu 1 301 -12 726 62 0 0 chr5 88823867 88823963 -114261569 - AluY SINE Alu -10 301 206 666 242 11 22 chr5 88823963 88824172 -114261360 + L1M4c LINE L1 1606 1898 -4484 2554 77 0 3 chr5 88824205 88824516 -114261016 + AluY SINE Alu 1 310 -1 610 139 89 0 chr5 88824538 88824639 -114260893 + AluSq/x SINE Alu 24 133 -179 2001 117 40 7 chr5 88824641 88824941 -114260591 + AluSg SINE Alu 1 310 0 2078 146 10 0 chr5 88824968 88825277 -114260255 + AluSx SINE Alu 1 312 0 748 188 7 29 chr5 88825277 88825483 -114260049 + L1MC/D LINE L1 5289 5490 -676 2269 110 0 13 chr5 88825491 88825799 -114259733 + AluSq SINE Alu 1 304 -9 1009 95 8 0 chr5 88826401 88826527 -114259005 + FLAM_C SINE Alu 1 127 -16 1882 163 17 0 chr5 88826552 88826852 -114258680 + AluJb SINE Alu 1 305 -7 224 258 11 0 chr5 88827780 88827869 -114257663 + C-rich Low_complexity Low_complexity 6 95 0 2268 105 3 3 chr5 88828190 88828494 -114257038 + AluSx SINE Alu 2 305 -7 2167 115 10 0 chr5 88829140 88829435 -114256097 - AluSq SINE Alu -15 298 1 395 176 0 0 chr5 88829474 88829552 -114255980 + AluS SINE Alu 1 62 -240 2150 119 24 0 chr5 88881352 88881647 -114203885 - AluSx SINE Alu -10 302 1 1090 191 47 43 chr5 88882514 88882690 -114202842 - MER46A DNA MER2_type -2495 236 57 2300 98 3 0 chr5 88882690 88882995 -114202537 + AluSx SINE Alu 3 308 -4 1090 191 47 43 chr5 88882995 88883053 -114202479 - MER46A DNA MER2_type -2674 57 1 194 254 79 16 chr5 88884412 88884475 -114201057 + L3 LINE CR1 1509 1575 -2 2494 50 0 13 chr5 88885044 88885344 -114200188 - AluY SINE Alu -15 296 1 460 303 119 5 chr5 88885563 88885748 -114199784 + MIR SINE MIR 30 235 -27 2318 114 0 0 chr5 88885786 88886084 -114199448 + AluSx SINE Alu 1 298 -14 383 234 126 9 chr5 88886647 88886758 -114198774 + MIR3 SINE MIR 85 208 0 22 0 0 0 chr5 88888134 88888156 -114197376 + AT_rich Low_complexity Low_complexity 1 22 0 325 178 248 74 chr5 88888202 88888280 -114197252 - L1ME4a LINE L1 0 6121 6058 2319 75 3 26 chr5 88888280 88888588 -114196944 + AluY SINE Alu 1 301 -10 325 178 248 74 chr5 88888588 88888751 -114196781 - L1ME4a LINE L1 -63 6058 5838 967 299 92 33 chr5 88888828 88889403 -114196129 - L1MC4a LINE L1 -1706 6102 5494 32 42 0 42 chr5 88889439 88889480 -114196052 + AT_rich Low_complexity Low_complexity 1 39 -30 2146 106 11 0 chr5 88889480 88889762 -114195770 - AluSx SINE Alu -27 285 1 32 42 0 42 chr5 88889762 88889792 -114195740 + AT_rich Low_complexity Low_complexity 39 69 0 252 307 79 0 chr5 88890364 88890504 -114195028 - L1ME LINE L1 -289 5881 5731 871 272 142 13 chr5 88890525 88891227 -114194305 - L1ME LINE L1 -503 5659 4861 376 252 21 28 chr5 88891365 88891508 -114194024 - L1MC5 LINE L1 -48 7913 7772 1289 170 9 13 chr5 88891584 88891813 -114193719 + MER46A DNA MER2_type 1 228 -8 275 157 176 46 chr5 88891817 88891970 -114193562 - L1MC5 LINE L1 -285 7676 7504 1529 182 84 43 chr5 88892007 88892228 -114193304 - MLT1B LTR MaLR -4 386 142 1867 109 44 4 chr5 88892228 88892526 -114193006 + AluSq SINE Alu 1 309 0 1529 182 84 43 chr5 88892526 88892671 -114192861 - MLT1B LTR MaLR -248 142 4 2311 108 13 51 chr5 88892727 88893117 -114192415 - THE1C LTR MaLR 0 375 1 10652 99 21 29 chr5 88893117 88894710 -114190822 - THE1C-int LTR MaLR 0 1580 1 2309 101 41 22 chr5 88894710 88895078 -114190454 - THE1C LTR MaLR 0 375 1 618 215 48 0 chr5 88895080 88895266 -114190266 - L1M4c LINE L1 -2739 3643 3449 * 2235 229 95 59 chr5 88895264 88895935 -114189597 - L1M4c LINE L1 -4209 2354 1709 2013 159 3 10 chr5 88895935 88896249 -114189283 - AluJo SINE Alu 0 312 1 2235 229 95 59 chr5 88896249 88896467 -114189065 - L1M4c LINE L1 -4854 1709 1500 2056 129 3 3 chr5 88896467 88896762 -114188770 - AluSq SINE Alu -14 299 5 2235 229 95 59 chr5 88896762 88897206 -114188326 - L1M4c LINE L1 -5063 1500 819 4537 228 67 22 chr5 88897249 88898546 -114186986 + L1M4 LINE L1 1 1356 -5186 239 188 0 21 chr5 88898546 88898594 -114186938 + Alu SINE Alu 143 189 -113 1992 177 12 3 chr5 88898815 88899159 -114186373 - MER7A DNA MER2_type 0 346 2 338 254 136 17 chr5 88899177 88899472 -114186060 - L1M4 LINE L1 -1700 4446 4117 1667 161 15 56 chr5 88899622 88899946 -114185586 - AluJb SINE Alu -1 311 1 771 157 0 8 chr5 88899962 88900083 -114185449 - FLAM_C SINE Alu -22 121 2 477 269 15 25 chr5 88900220 88900524 -114185008 - L1ME LINE L1 -5015 1945 1643 396 138 0 0 chr5 88900571 88900636 -114184896 + (TG)n Simple_repeat Simple_repeat 2 66 0 2419 77 0 3 chr5 88900641 88900941 -114184591 - AluY SINE Alu -10 301 3 237 249 130 54 chr5 88900943 88901055 -114184477 - L1ME LINE L1 -5335 1524 1422 1942 159 3 0 chr5 88901055 88901351 -114184181 - AluJo SINE Alu -13 299 3 237 249 130 54 chr5 88901351 88901392 -114184140 - L1ME LINE L1 -5437 1422 1386 7366 35 28 1 chr5 88901392 88902266 -114183266 + MER11D LTR ERVK 1 897 0 237 249 130 54 chr5 88902266 88902296 -114183236 - L1ME LINE L1 -5473 1386 1326 432 242 70 21 chr5 88902927 88903113 -114182419 - L1ME LINE L1 -6182 956 762 24 0 0 0 chr5 88903528 88903552 -114181980 + AT_rich Low_complexity Low_complexity 1 24 0 302 167 136 15 chr5 88904587 88904653 -114180879 + Tigger8 DNA MER2_type 132 205 -461 986 235 32 5 chr5 88905532 88905749 -114179783 - MER58A DNA MER1_type 0 224 2 210 250 0 21 chr5 88905941 88905989 -114179543 - MER91B DNA MER1_type -119 71 25 583 235 211 89 chr5 88906162 88906499 -114179033 - L1MC4a LINE L1 -1906 5902 5503 1947 129 32 0 chr5 88906499 88906779 -114178753 - AluSx SINE Alu -23 289 1 583 235 211 89 chr5 88906779 88906858 -114178674 - L1MC4a LINE L1 -2305 5503 5435 21 0 0 0 chr5 88906858 88906879 -114178653 + AT_rich Low_complexity Low_complexity 1 21 0 754 165 0 0 chr5 88906889 88907004 -114178528 - FLAM_C SINE Alu -28 115 1 28 29 0 0 chr5 88907624 88907659 -114177873 + AT_rich Low_complexity Low_complexity 1 35 0 277 261 111 36 chr5 88910867 88911186 -114174346 + L1MEd LINE L1 948 1281 -4848 1423 169 93 4 chr5 88911186 88911465 -114174067 + AluJo SINE Alu 1 304 -8 251 309 0 0 chr5 88911476 88911560 -114173972 + L1MDa LINE L1 247 330 -6210 1978 245 81 77 chr5 88912061 88912364 -114173168 + L1MDa LINE L1 927 1227 -5494 2026 140 20 3 chr5 88912364 88912664 -114172868 - AluSx SINE Alu -7 305 1 1978 245 81 77 chr5 88912664 88913398 -114172134 + L1MDa LINE L1 1227 1957 -4764 2122 118 6 16 chr5 88913398 88913712 -114171820 - AluSx SINE Alu -1 311 1 1978 245 81 77 chr5 88913712 88914269 -114171263 + L1MDa LINE L1 1957 2510 -4211 1741 191 3 7 chr5 88914269 88914568 -114170964 + AluJo SINE Alu 1 298 -14 1978 245 81 77 chr5 88914568 88914611 -114170921 + L1MDa LINE L1 2510 2551 -4170 1847 150 17 23 chr5 88914611 88914911 -114170621 - AluSx SINE Alu -14 298 1 1978 245 81 77 chr5 88914911 88915106 -114170426 + L1MDa LINE L1 2551 2813 -3908 243 79 0 0 chr5 88915111 88915149 -114170383 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 825 191 13 19 chr5 88915149 88915306 -114170226 - FAM SINE Alu -18 157 2 267 289 100 0 chr5 88915318 88915408 -114170124 - MIR SINE MIR -110 152 54 183 321 36 0 chr5 88915401 88915457 -114170075 + L3 LINE CR1 1365 1422 -155 * 1692 157 39 3 chr5 88915467 88915753 -114169779 - AluJo SINE Alu -16 296 1 195 171 49 0 chr5 88915753 88915794 -114169738 + L2 LINE L2 117 159 -3155 280 241 97 61 chr5 88915890 88916118 -114169414 - L1MC5 LINE L1 -24 7937 7702 578 71 24 0 chr5 88916195 88916280 -114169252 + L1PA13 LINE L1 5872 5958 -210 1219 93 34 15 chr5 88916380 88916584 -114168948 + L1PA13 LINE L1 5956 6163 0 2446 74 0 3 chr5 88916586 88916883 -114168649 + AluSx SINE Alu 1 296 -16 3135 150 101 35 chr5 88916891 88917718 -114167814 + L1MB8 LINE L1 5155 6017 -161 234 0 0 0 chr5 88918037 88918063 -114167469 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1906 116 0 4 chr5 88918066 88918342 -114167190 - AluSx SINE Alu -37 275 1 237 257 57 0 chr5 88919533 88919638 -114165894 - L1ME4a LINE L1 -32 6089 5979 350 273 22 79 chr5 88919711 88919978 -114165554 - L1ME4a LINE L1 -269 5852 5601 2269 76 10 3 chr5 88920285 88920586 -114164946 + AluY SINE Alu 1 303 -8 387 0 0 0 chr5 88920662 88920705 -114164827 + (CA)n Simple_repeat Simple_repeat 2 44 0 1203 159 100 33 chr5 88920764 88921035 -114164497 + AluJo SINE Alu 1 289 -23 2142 158 54 46 chr5 88921054 88921554 -114163978 - L1MB7 LINE L1 -15 6169 5666 210 182 0 0 chr5 88921600 88921633 -114163899 - MIR3 SINE MIR -25 183 151 3008 145 21 30 chr5 88921665 88921855 -114163677 - L1MA7 LINE L1 0 6291 6101 231 36 0 0 chr5 88921855 88921883 -114163649 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1806 139 0 24 chr5 88921883 88922170 -114163362 - AluJo SINE Alu -30 282 3 3008 145 21 30 chr5 88922170 88922552 -114162980 - L1MA7 LINE L1 -188 6103 5723 508 214 27 0 chr5 88922553 88922665 -114162867 - MER58B DNA MER1_type -4 337 223 416 175 31 31 chr5 88922673 88922770 -114162762 + L1MC2 LINE L1 5991 6087 -257 3071 137 31 111 chr5 88922770 88923320 -114162212 + Tigger1 DNA MER2_type 1 480 -1938 1845 176 3 3 chr5 88923320 88923622 -114161910 + AluJo SINE Alu 1 302 -10 3071 137 31 111 chr5 88923622 88923801 -114161731 + Tigger1 DNA MER2_type 480 672 -1746 3747 111 75 22 chr5 88923801 88924765 -114160767 + MER11A LTR ERVK 1 1266 0 * 10139 125 29 19 chr5 88924765 88925067 -114160465 + Tigger1 DNA MER2_type 667 965 -1453 1879 145 0 3 chr5 88925067 88925467 -114160065 - AluJb SINE Alu 0 399 1 10139 125 29 19 chr5 88925467 88926202 -114159330 + Tigger1 DNA MER2_type 965 1732 -686 2433 71 3 7 chr5 88926202 88926512 -114159020 + AluY SINE Alu 1 309 -2 10139 125 29 19 chr5 88926512 88927205 -114158327 + Tigger1 DNA MER2_type 1732 2417 -1 806 134 21 0 chr5 88927207 88927349 -114158183 + L1MC2 LINE L1 6087 6231 -113 239 188 50 75 chr5 88927403 88927449 -114158083 + L1MC2 LINE L1 6240 6285 -59 2398 107 0 0 chr5 88927449 88927757 -114157775 - AluSx SINE Alu -4 308 1 239 188 50 75 chr5 88927757 88927790 -114157742 + L1MC2 LINE L1 6285 6317 -27 1897 153 36 0 chr5 88927790 88928091 -114157441 + AluSx SINE Alu 1 312 0 1392 29 0 0 chr5 88928405 88928604 -114156928 + L1PA5 LINE L1 5959 6157 0 25 31 0 0 chr5 88930108 88930140 -114155392 + AT_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr5 88930349 88930396 -114155136 + AT_rich Low_complexity Low_complexity 1 47 0 2020 209 16 5 chr5 88930515 88930956 -114154576 + L1MA9 LINE L1 5612 6057 -255 2155 93 0 21 chr5 88931652 88931965 -114153567 - AluSx SINE Alu 0 307 1 564 228 118 24 chr5 88932129 88932300 -114153232 + L1MA9 LINE L1 6044 6240 -72 186 71 0 0 chr5 88932300 88932328 -114153204 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 564 228 118 24 chr5 88932328 88932367 -114153165 + L1MA9 LINE L1 6240 6274 -38 538 211 0 0 chr5 88932693 88932828 -114152704 - FRAM SINE Alu 0 192 58 22 0 0 0 chr5 88933115 88933137 -114152395 + AT_rich Low_complexity Low_complexity 1 22 0 333 350 39 0 chr5 88933467 88933570 -114151962 + L2 LINE L2 3203 3309 -4 816 184 76 22 chr5 88933603 88933788 -114151744 + L1MB7 LINE L1 5969 6163 -21 279 269 46 55 chr5 88933794 88933932 -114151600 + L1M4 LINE L1 4158 4295 -1851 2072 143 3 10 chr5 88933932 88934246 -114151286 + AluJo SINE Alu 1 312 0 279 269 46 55 chr5 88934246 88934326 -114151206 + L1M4 LINE L1 4295 4374 -1772 770 337 55 37 chr5 88934646 88935029 -114150503 + L2 LINE L2 2239 2628 -686 2108 91 4 0 chr5 88935159 88935434 -114150098 - AluSc SINE Alu -8 301 26 536 156 11 0 chr5 88935851 88935941 -114149591 - AluJ/FLAM SINE Alu -221 91 1 2522 66 0 0 chr5 88936033 88936335 -114149197 - AluY SINE Alu -9 302 1 2280 110 0 3 chr5 88936391 88936699 -114148833 - AluSg SINE Alu -3 307 1 318 326 104 26 chr5 88936838 88937177 -114148355 + MLT1L LTR MaLR 214 604 -11 343 196 10 93 chr5 88937195 88937292 -114148240 + L2 LINE L2 2626 2714 -600 1880 104 112 4 chr5 88937512 88937780 -114147752 + AluSc SINE Alu 1 297 -12 2251 123 0 0 chr5 88938041 88938342 -114147190 + AluSx SINE Alu 1 301 -11 375 296 68 17 chr5 88938472 88938648 -114146884 + L2 LINE L2 2877 3061 -211 2545 152 26 13 chr5 88938674 88939202 -114146330 - L1MB7 LINE L1 -278 5906 5372 21 0 0 0 chr5 88939349 88939370 -114146162 + AT_rich Low_complexity Low_complexity 1 21 0 871 212 86 40 chr5 88939577 88939621 -114145911 + MSTD LTR MaLR 1 42 -354 1882 137 0 24 chr5 88939621 88939913 -114145619 - AluJo SINE Alu -19 293 9 871 212 86 40 chr5 88939913 88940209 -114145323 + MSTD LTR MaLR 42 396 0 377 274 0 0 chr5 88940381 88940483 -114145049 - MLT1-int LTR MaLR -848 523 422 583 237 163 74 chr5 88940731 88941149 -114144383 - MLT1H1 LTR MaLR -8 547 93 527 140 26 26 chr5 88941158 88941272 -114144260 + Ricksha DNA DNA 9 122 -1924 * 6802 153 65 47 chr5 88941251 88941832 -114143700 + Ricksha DNA DNA 1710 2279 -967 1451 167 0 9 chr5 88941832 88942060 -114143472 + AluJo SINE Alu 1 226 -86 232 53 0 0 chr5 88942060 88942098 -114143434 + AluJo SINE Alu 265 302 0 6802 153 65 47 chr5 88942098 88942256 -114143276 + Ricksha DNA DNA 2279 2433 -813 2176 113 0 3 chr5 88942256 88942548 -114142984 - AluSx SINE Alu -21 291 1 6802 153 65 47 chr5 88942548 88943142 -114142390 + Ricksha DNA DNA 2433 3087 -159 1798 164 16 29 chr5 88943142 88943453 -114142079 + AluJo SINE Alu 6 312 0 6802 153 65 47 chr5 88943453 88943603 -114141929 + Ricksha DNA DNA 3087 3233 -13 275 261 43 0 chr5 88944009 88944101 -114141431 + MIR SINE MIR 73 168 -94 2088 116 0 0 chr5 88944837 88945167 -114140365 + AluSq SINE Alu 1 330 0 2213 85 3 3 chr5 88945602 88945885 -114139647 + AluSq SINE Alu 1 318 0 210 57 29 0 chr5 88945885 88945920 -114139612 + (TAAA)n Simple_repeat Simple_repeat 2 116 0 413 275 40 40 chr5 88945929 88946078 -114139454 - MIR3 SINE MIR -39 169 21 758 293 65 8 chr5 88946332 88946578 -114138954 - MIR SINE MIR 0 262 3 22 23 0 45 chr5 88946667 88946688 -114138844 + AT_rich Low_complexity Low_complexity 1 21 -21 2300 96 3 0 chr5 88946688 88946979 -114138553 + AluSp SINE Alu 1 292 -21 22 23 0 45 chr5 88946979 88947001 -114138531 + AT_rich Low_complexity Low_complexity 21 42 0 1970 222 19 27 chr5 88947507 88948030 -114137502 + MER44D DNA MER2_type 32 605 0 241 296 25 37 chr5 88948314 88948395 -114137137 + L2 LINE L2 3185 3264 -8 2386 104 0 0 chr5 88948435 88948744 -114136788 + AluSx SINE Alu 1 309 -3 22 0 0 0 chr5 88950817 88950839 -114134693 + AT_rich Low_complexity Low_complexity 1 22 0 2327 104 0 0 chr5 88951008 88951305 -114134227 + AluSx SINE Alu 1 297 -15 330 153 20 10 chr5 88951313 88951411 -114134121 + (TA)n Simple_repeat Simple_repeat 2 100 0 2128 102 13 40 chr5 88951459 88951762 -114133770 - AluSx SINE Alu -17 295 1 1968 159 3 10 chr5 88951762 88952071 -114133461 - AluJo SINE Alu -5 307 1 255 310 86 52 chr5 88952929 88953045 -114132487 + L2 LINE L2 3142 3261 -11 1826 174 0 0 chr5 88953125 88953412 -114132120 + AluJb SINE Alu 1 287 -25 21 0 0 0 chr5 88953518 88953539 -114131993 + AT_rich Low_complexity Low_complexity 1 21 0 966 279 103 12 chr5 88953987 88954403 -114131129 + L1MC4a LINE L1 5477 5930 -1878 22 88 0 0 chr5 88954685 88954742 -114130790 + AT_rich Low_complexity Low_complexity 1 57 0 482 200 118 0 chr5 88954965 88955100 -114130432 - L1MA9 LINE L1 -133 6179 6029 378 327 9 18 chr5 88955496 88955609 -114129923 + L2 LINE L2 3197 3308 -5 287 305 13 26 chr5 88956136 88956290 -114129242 - MLT1J LTR MaLR -33 478 327 183 80 0 0 chr5 88956516 88956541 -114128991 + (TA)n Simple_repeat Simple_repeat 1 25 0 213 193 18 18 chr5 88956587 88956644 -114128888 + (TA)n Simple_repeat Simple_repeat 2 58 0 1038 241 8 4 chr5 88956666 88956903 -114128629 + MER8 DNA MER2_type 1 238 -1 1878 142 0 40 chr5 88956971 88957273 -114128259 + AluSx SINE Alu 1 290 -22 693 165 60 75 chr5 88957429 88957629 -114127903 + MER20 DNA MER1_type 17 213 -6 3577 126 47 34 chr5 88957731 88957788 -114127744 - Tigger3(Golem) DNA MER2_type 0 3029 2974 2229 127 0 7 chr5 88957788 88958087 -114127445 + AluSx SINE Alu 3 299 -13 3577 126 47 34 chr5 88958087 88958726 -114126806 - Tigger3(Golem) DNA MER2_type -55 2974 2324 314 233 14 0 chr5 88958721 88958794 -114126738 + U3 snRNA snRNA 1 74 -143 * 1862 122 23 32 chr5 88958794 88959240 -114126292 + L1MA2 LINE L1 3336 3782 -3783 917 120 183 0 chr5 88959248 88959390 -114126142 + FRAM SINE Alu 1 160 -16 22085 47 5 1 chr5 88959396 88963024 -114122508 + L1PA5 LINE L1 2502 6150 -4 14631 152 31 12 chr5 88963032 88963741 -114121791 + L1MA2 LINE L1 3785 4480 -3243 2339 78 0 0 chr5 88963741 88964048 -114121484 + AluY SINE Alu 1 307 0 14631 152 31 12 chr5 88964048 88964119 -114121413 + L1MA2 LINE L1 4480 4548 -3175 2183 108 10 0 chr5 88964119 88964414 -114121118 + AluSx SINE Alu 4 301 -11 14631 152 31 12 chr5 88964414 88966785 -114118747 + L1MA2 LINE L1 4548 7024 -699 2093 101 0 17 chr5 88966785 88967119 -114118413 - AluSx SINE Alu 0 331 3 14631 152 31 12 chr5 88967119 88967833 -114117699 + L1MA2 LINE L1 7024 7723 0 1466 239 55 31 chr5 88967875 88968260 -114117272 - L1M3c LINE L1 -5745 396 3 520 309 24 0 chr5 88968271 88968439 -114117093 - MLT1J LTR MaLR -339 172 1 25 65 0 0 chr5 88968501 88968547 -114116985 + AT_rich Low_complexity Low_complexity 1 46 0 2321 99 0 10 chr5 88968700 88969012 -114116520 - AluSc SINE Alu 0 309 1 1215 67 11 11 chr5 88969012 88969018 -114116514 + (TTTC)n Simple_repeat Simple_repeat 1 186 0 1215 67 11 11 chr5 88969018 88969198 -114116334 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2002 147 3 7 chr5 88969236 88969543 -114115989 - AluSx SINE Alu -6 306 1 300 158 0 0 chr5 88969598 88969655 -114115877 + T-rich Low_complexity Low_complexity 2 58 0 261 264 104 25 chr5 88969690 88969853 -114115679 - L1MC/D LINE L1 -1980 5828 5653 245 87 0 22 chr5 88970096 88970142 -114115390 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1785 157 3 3 chr5 88970144 88970437 -114115095 - AluSx SINE Alu -19 293 1 784 280 125 2 chr5 88970480 88970912 -114114620 - L1MC4 LINE L1 -3 8039 7555 36 0 0 0 chr5 88973286 88973322 -114112210 + AT_rich Low_complexity Low_complexity 1 36 0 2068 102 3 3 chr5 88973322 88973607 -114111925 - AluY SINE Alu -26 285 1 2430 109 0 0 chr5 88973607 88973917 -114111615 - AluSx SINE Alu -1 311 1 198 198 198 74 chr5 88974165 88974246 -114111286 + L2 LINE L2 3180 3270 -43 455 339 49 27 chr5 88974385 88974609 -114110923 + MIR SINE MIR 20 248 -14 28 48 0 0 chr5 88974851 88974893 -114110639 + AT_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr5 88975015 88975058 -114110474 + AT_rich Low_complexity Low_complexity 1 43 0 2016 137 7 13 chr5 88975087 88975387 -114110145 - AluSx SINE Alu -14 298 1 1999 216 143 20 chr5 88975492 88976566 -114108966 + L1ME3 LINE L1 4931 6156 -6 2112 138 0 3 chr5 88976633 88976930 -114108602 - AluSx SINE Alu -16 296 1 233 200 0 0 chr5 88976984 88976992 -114108540 + (TA)n Simple_repeat Simple_repeat 1 8 -47 2099 107 0 7 chr5 88976992 88977281 -114108251 + AluSg SINE Alu 1 287 -23 233 200 0 0 chr5 88977281 88977327 -114108205 + (TA)n Simple_repeat Simple_repeat 7 55 0 249 287 148 0 chr5 88978189 88978297 -114107235 - L2 LINE L2 -238 3034 2911 2525 78 0 0 chr5 88978582 88978890 -114106642 + AluSg SINE Alu 1 308 -2 5789 132 24 4 chr5 88979165 88979522 -114106010 - L1PB1 LINE L1 -1 6150 5802 213 39 0 0 chr5 88979522 88979548 -114105984 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 369 0 0 0 chr5 88979547 88979588 -114105944 + (TA)n Simple_repeat Simple_repeat 2 42 0 5789 132 24 4 chr5 88979548 88980784 -114104748 - L1PB1 LINE L1 -349 5802 4567 817 121 73 0 chr5 88980869 88980993 -114104539 + FLAM_C SINE Alu 1 133 0 582 159 0 0 chr5 88981496 88981584 -114103948 + FLAM_A SINE Alu 1 88 -54 410 348 186 9 chr5 88982204 88982532 -114103000 - L3 LINE CR1 -149 1428 1043 2122 179 31 7 chr5 88982761 88983174 -114102358 + MER54A LTR ERVL 477 899 -2 412 325 58 0 chr5 88983192 88983346 -114102186 - L3 LINE CR1 -708 869 707 1851 109 4 0 chr5 88983373 88983621 -114101911 + AluSx SINE Alu 59 307 -5 2273 113 0 0 chr5 88983646 88983946 -114101586 + AluSx SINE Alu 1 300 -12 2141 117 7 0 chr5 88983959 88984259 -114101273 + AluSx SINE Alu 1 302 -10 2373 140 10 111 chr5 88984455 88984471 -114101061 - MER74A LTR ERVL 0 558 542 1977 113 70 45 chr5 88984471 88984826 -114100706 + THE1B LTR MaLR 1 364 0 2373 140 10 111 chr5 88984826 88984885 -114100647 - MER74A LTR ERVL -16 542 479 2000 128 18 0 chr5 88984885 88985167 -114100365 + AluSx SINE Alu 1 287 -25 2373 140 10 111 chr5 88985167 88985710 -114099822 - MER74A LTR ERVL -79 479 2 1953 66 14 59 chr5 88986300 88986587 -114098945 - AluY SINE Alu -2 309 36 2139 95 0 60 chr5 88986595 88986773 -114098759 - AluSx SINE Alu -14 298 146 2344 103 0 3 chr5 88986773 88987085 -114098447 - AluSx SINE Alu 0 312 2 2139 95 0 60 chr5 88987085 88987223 -114098309 - AluSx SINE Alu -166 146 1 25 31 0 0 chr5 88987889 88987921 -114097611 + AT_rich Low_complexity Low_complexity 1 32 0 35 45 0 15 chr5 88990978 88991019 -114094513 + AT_rich Low_complexity Low_complexity 1 42 -24 1820 155 7 24 chr5 88991019 88991315 -114094217 + AluJo SINE Alu 1 291 -21 35 45 0 15 chr5 88991315 88991340 -114094192 + AT_rich Low_complexity Low_complexity 42 66 0 32 67 0 0 chr5 88991761 88991821 -114093711 + AT_rich Low_complexity Low_complexity 1 60 0 428 336 219 3 chr5 88992171 88992454 -114093078 - L2 LINE L2 -15 3257 2914 792 236 83 111 chr5 88992530 88992697 -114092835 + HAL1 LINE L1 8 178 -2329 459 0 0 0 chr5 88992697 88992748 -114092784 + (TG)n Simple_repeat Simple_repeat 1 51 0 792 236 83 111 chr5 88992748 88993268 -114092264 + HAL1 LINE L1 178 676 -1831 437 256 58 32 chr5 88993468 88993624 -114091908 + HAL1 LINE L1 771 930 -1577 26 0 0 0 chr5 88993742 88993768 -114091764 + AT_rich Low_complexity Low_complexity 1 26 0 812 167 0 0 chr5 88994824 88994956 -114090576 - FLAM_C SINE Alu -1 132 1 2357 98 3 0 chr5 88995345 88995650 -114089882 - AluSp SINE Alu -7 306 1 328 313 30 15 chr5 88996116 88996247 -114089285 + MIR SINE MIR 51 183 -79 26 0 0 0 chr5 88996709 88996735 -114088797 + AT_rich Low_complexity Low_complexity 1 26 0 323 327 102 45 chr5 88996745 88997078 -114088454 + HAL1 LINE L1 110 461 -2046 2437 92 0 3 chr5 88997983 88998297 -114087235 + AluSq SINE Alu 1 313 0 296 226 133 13 chr5 88998484 88998635 -114086897 + MIR SINE MIR 12 185 -62 262 239 56 0 chr5 88998779 88998850 -114086682 - MER5A DNA MER1_type -4 185 111 333 0 0 0 chr5 88999535 88999572 -114085960 + (CA)n Simple_repeat Simple_repeat 2 38 0 252 0 0 0 chr5 88999571 88999599 -114085933 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 2225 118 0 6 chr5 89001580 89001894 -114083638 - AluSx SINE Alu 0 312 1 1991 138 3 3 chr5 89002326 89002617 -114082915 + AluSx SINE Alu 1 291 -21 1905 234 113 2 chr5 89002632 89003144 -114082388 - L1ME3A LINE L1 -61 6109 5541 1957 187 30 98 chr5 89003146 89003686 -114081846 - MLT1D LTR MaLR -2 503 1 2224 112 0 26 chr5 89004625 89004929 -114080603 + AluSx SINE Alu 1 296 -16 389 194 0 0 chr5 89005100 89005167 -114080365 - L1PB4 LINE L1 -77 6079 6013 1118 206 5 9 chr5 89005221 89005439 -114080093 + L1PB4 LINE L1 5931 6147 -9 467 296 46 0 chr5 89005503 89005655 -114079877 + HAL1 LINE L1 202 360 -2147 3775 215 102 37 chr5 89005670 89006886 -114078646 + L1MB8 LINE L1 4029 5164 -1014 2113 140 0 0 chr5 89006886 89007186 -114078346 + AluJb SINE Alu 1 300 -12 3775 215 102 37 chr5 89007186 89007646 -114077886 + L1MB8 LINE L1 5164 5593 -585 2371 90 7 0 chr5 89007646 89007946 -114077586 + AluSq SINE Alu 1 302 -11 3775 215 102 37 chr5 89007946 89008273 -114077259 + L1MB8 LINE L1 5593 6173 -5 651 281 106 0 chr5 89008280 89008536 -114076996 + HAL1 LINE L1 348 630 -1877 703 262 76 33 chr5 89008560 89008835 -114076697 + HAL1 LINE L1 740 1026 -1481 2173 79 0 8 chr5 89008868 89009133 -114076399 - AluSg SINE Alu -32 278 16 18955 49 3 28 chr5 89009341 89012277 -114073255 - L1PA5 LINE L1 -323 5831 2969 308 200 105 53 chr5 89012393 89012555 -114072977 - AluS SINE Alu -218 85 1 1687 126 115 15 chr5 89012589 89012859 -114072673 + AluSx SINE Alu 1 297 -15 613 173 4 47 chr5 89013082 89013368 -114072164 + GA-rich Low_complexity Low_complexity 1 273 0 1619 268 49 12 chr5 89013376 89013970 -114071562 + HAL1 LINE L1 1140 1755 -752 8002 47 6 32 chr5 89014227 89015388 -114070144 - L1PA5 LINE L1 0 6154 5036 2935 3 0 0 chr5 89015388 89015697 -114069835 - AluYa5 SINE Alu -2 309 1 8002 47 6 32 chr5 89015697 89016362 -114069170 - L1PA5 LINE L1 -1118 5036 4355 279 151 0 96 chr5 89016586 89016659 -114068873 - L1M4 LINE L1 -660 5514 5449 2131 127 0 10 chr5 89016665 89016972 -114068560 - AluSx SINE Alu -8 304 1 2299 101 0 7 chr5 89016980 89017288 -114068244 - AluSg SINE Alu -4 306 1 511 266 14 85 chr5 89017439 89017721 -114067811 + HAL1 LINE L1 2245 2506 -1 207 204 0 0 chr5 89017762 89017806 -114067726 + (CA)n Simple_repeat Simple_repeat 2 45 0 948 235 17 29 chr5 89017808 89018046 -114067486 + MER8 DNA MER2_type 3 237 -2 378 197 13 0 chr5 89018066 89018142 -114067390 + L1MC4 LINE L1 7919 7995 -47 2183 124 3 0 chr5 89018142 89018441 -114067091 - AluSx SINE Alu -12 300 1 454 255 137 20 chr5 89018474 89018627 -114066905 - MIR SINE MIR -18 244 74 1991 161 117 8 chr5 89018884 89019270 -114066262 + MSTA LTR MaLR 1 428 0 1408 86 0 0 chr5 89019656 89019830 -114065702 - AluSp SINE Alu -10 303 130 311 244 215 12 chr5 89019932 89020104 -114065428 - L1ME4a LINE L1 -130 5991 5785 1884 142 0 21 chr5 89020223 89020512 -114065020 - AluJo SINE Alu -29 283 1 1392 180 48 18 chr5 89021397 89021669 -114063863 + AluJo SINE Alu 13 292 -20 291 252 48 61 chr5 89022438 89022554 -114062978 + MIR SINE MIR 74 189 -73 1842 131 35 7 chr5 89022554 89022712 -114062820 - AluJo SINE Alu -22 290 119 207 0 0 0 chr5 89022712 89022735 -114062797 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1842 131 35 7 chr5 89022735 89022858 -114062674 - AluJo SINE Alu -193 119 1 291 252 48 61 chr5 89022858 89022888 -114062644 + MIR SINE MIR 189 218 -44 408 254 196 18 chr5 89023210 89023540 -114061992 + MLT1J1 LTR MaLR 103 446 0 2014 151 0 25 chr5 89023778 89024096 -114061436 + AluSx SINE Alu 1 310 -2 1314 134 0 26 chr5 89024109 89024246 -114061286 + AluJo SINE Alu 1 133 -179 2386 97 0 0 chr5 89024246 89024545 -114060987 + AluSg SINE Alu 1 299 -11 1314 134 0 26 chr5 89024545 89024601 -114060931 + AluJo SINE Alu 133 189 -123 405 60 0 0 chr5 89024601 89024651 -114060881 + Alu SINE Alu 244 293 -9 1653 191 36 18 chr5 89025828 89026163 -114059369 + MER58B DNA MER1_type 1 341 0 273 306 72 86 chr5 89026359 89026650 -114058882 - L2 LINE L2 -7 3265 2979 322 218 51 0 chr5 89026658 89026736 -114058796 + MLT1J LTR MaLR 413 494 -17 1229 199 75 25 chr5 89026736 89027017 -114058515 - AluJb SINE Alu -7 295 1 2622 48 0 16 chr5 89027597 89027912 -114057620 + AluY SINE Alu 2 311 0 2306 106 3 0 chr5 89027924 89028227 -114057305 + AluSq SINE Alu 1 304 -9 2097 125 0 7 chr5 89028237 89028541 -114056991 + AluSp SINE Alu 1 302 -11 273 185 74 0 chr5 89028847 89028901 -114056631 + LTR67 LTR ERVL 2 59 -498 308 133 0 0 chr5 89028997 89029042 -114056490 + Alu SINE Alu 235 279 -23 1020 209 0 36 chr5 89029337 89029557 -114055975 - AluJo SINE Alu -16 296 85 468 85 0 0 chr5 89029557 89029616 -114055916 - AluY SINE Alu -62 249 191 1189 58 7 0 chr5 89029616 89029755 -114055777 - AluYa5 SINE Alu -171 140 1 419 335 7 0 chr5 89030119 89030263 -114055269 - MIR3 SINE MIR -18 190 45 1835 161 3 10 chr5 89030587 89030886 -114054646 - AluJo SINE Alu -15 297 1 24 0 0 0 chr5 89030893 89030917 -114054615 + AT_rich Low_complexity Low_complexity 1 24 0 1903 129 76 22 chr5 89031618 89031974 -114053558 + THE1C LTR MaLR 1 375 0 2108 125 6 6 chr5 89032562 89032873 -114052659 - AluSx SINE Alu -1 311 1 1159 130 5 16 chr5 89033490 89033675 -114051857 - AluSc SINE Alu -8 301 119 696 164 0 0 chr5 89033953 89034075 -114051457 + AluSg/x SINE Alu 143 264 -46 2404 170 21 11 chr5 89034075 89034510 -114051022 + MER65C LTR ERV1 23 461 0 377 297 96 36 chr5 89034762 89034981 -114050551 - MIR SINE MIR -6 256 25 2318 93 3 0 chr5 89035208 89035508 -114050024 - AluSg SINE Alu -9 301 1 843 180 21 36 chr5 89035520 89035714 -114049818 - L1MB7 LINE L1 -1 6183 5993 977 193 132 88 chr5 89036633 89036727 -114048805 + MLT2C1 LTR ERVL 19 107 -290 1248 141 184 24 chr5 89036727 89036982 -114048550 - AluSg1 SINE Alu -13 296 1 977 193 132 88 chr5 89036982 89037250 -114048282 + MLT2C1 LTR ERVL 107 397 0 2412 118 30 3 chr5 89037381 89037746 -114047786 + THE1C LTR MaLR 1 375 0 1475 105 27 133 chr5 89038462 89038595 -114046937 + AluSx SINE Alu 31 176 -136 1889 126 11 0 chr5 89038595 89038857 -114046675 + AluSx SINE Alu 1 265 -47 1657 80 13 0 chr5 89038863 89039087 -114046445 + AluSg/x SINE Alu 83 309 -3 1475 105 27 133 chr5 89039087 89039240 -114046292 + AluSx SINE Alu 181 293 -19 1209 142 15 29 chr5 89039599 89039803 -114045729 - AluJb SINE Alu -25 287 87 229 238 175 0 chr5 89039942 89040022 -114045510 - MER5A DNA MER1_type 0 189 96 321 263 147 42 chr5 89040411 89040601 -114044931 - HAL1 LINE L1 -2 2505 2296 * 457 241 193 37 chr5 89040587 89041023 -114044509 - HAL1 LINE L1 0 2507 2004 619 198 8 0 chr5 89041081 89041202 -114044330 - FLAM_A SINE Alu -11 122 1 976 210 62 4 chr5 89041260 89041504 -114044028 - HAL1 LINE L1 -726 1781 1520 1688 165 55 0 chr5 89041504 89041776 -114043756 - AluJb SINE Alu -25 287 1 976 210 62 4 chr5 89041776 89041788 -114043744 - HAL1 LINE L1 -987 1520 1510 357 242 164 0 chr5 89041857 89041985 -114043547 + L2 LINE L2 2499 2647 -667 22 0 0 0 chr5 89041987 89042009 -114043523 + AT_rich Low_complexity Low_complexity 1 22 0 2013 117 7 27 chr5 89042067 89042367 -114043165 + AluSq SINE Alu 2 295 -18 348 308 77 16 chr5 89042568 89042750 -114042782 + LTR16C LTR ERVL 299 491 0 363 291 103 23 chr5 89042760 89042935 -114042597 - L1ME LINE L1 -356 5765 5577 22 0 0 0 chr5 89043317 89043339 -114042193 + AT_rich Low_complexity Low_complexity 1 22 0 13263 150 33 5 chr5 89043802 89047302 -114038230 + L1MA3 LINE L1 2706 6298 -7 1182 69 0 14 chr5 89047309 89047453 -114038079 - AluSq/x SINE Alu -165 147 6 21 0 0 0 chr5 89047457 89047478 -114038054 + AT_rich Low_complexity Low_complexity 1 21 0 919 115 0 0 chr5 89047478 89047608 -114037924 - L1PB1 LINE L1 -1 6150 6021 351 0 0 0 chr5 89048513 89048552 -114036980 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 70 0 0 chr5 89048609 89048652 -114036880 + AT_rich Low_complexity Low_complexity 1 43 0 1493 191 58 0 chr5 89048722 89048999 -114036533 + Tigger7 DNA MER2_type 7 299 -434 2436 83 3 0 chr5 89049007 89049309 -114036223 + AluSp SINE Alu 1 303 -10 696 175 187 6 chr5 89049322 89049488 -114036044 - MER58A DNA MER1_type -8 216 21 1920 150 0 0 chr5 89049814 89050100 -114035432 - AluSx SINE Alu -13 299 14 336 137 0 0 chr5 89050276 89050340 -114035192 + Alu SINE Alu 1 47 -254 520 126 36 12 chr5 89050474 89050641 -114034891 + (TA)n Simple_repeat Simple_repeat 2 172 0 358 217 0 0 chr5 89050949 89051018 -114034514 - MLT1K LTR MaLR -1 587 519 2136 138 3 0 chr5 89051024 89051322 -114034210 + AluSx SINE Alu 1 299 -13 2189 100 13 19 chr5 89051460 89051771 -114033761 + AluSg SINE Alu 1 309 -1 357 331 29 17 chr5 89052184 89052356 -114033176 + LTR16C LTR ERVL 313 486 -5 210 37 0 0 chr5 89052356 89052383 -114033149 + (TA)n Simple_repeat Simple_repeat 2 28 0 1102 202 152 65 chr5 89053717 89053853 -114031679 + MLT1A1 LTR MaLR 1 124 -241 2310 93 0 26 chr5 89053853 89054166 -114031366 + AluSq SINE Alu 1 305 -8 1102 202 152 65 chr5 89054166 89054365 -114031167 + MLT1A1 LTR MaLR 124 365 0 710 226 28 123 chr5 89054699 89055172 -114030360 - HAL1 LINE L1 -1136 1371 944 668 309 84 44 chr5 89055246 89055544 -114029988 - MLT1K LTR MaLR -263 325 16 233 366 181 4 chr5 89055621 89055902 -114029630 - L3 LINE CR1 -115 1462 1132 2243 56 4 4 chr5 89056107 89056375 -114029157 + L1PA3 LINE L1 5883 6150 -5 349 176 33 121 chr5 89056421 89056512 -114029020 + MER5B DNA MER1_type 48 130 -48 1295 54 78 0 chr5 89056534 89056700 -114028832 - AluY SINE Alu -132 179 1 328 194 48 0 chr5 89056700 89056762 -114028770 + MER5B DNA MER1_type 114 178 0 1467 184 69 160 chr5 89057617 89058070 -114027462 - MLT2B1 LTR ERVL -2 518 119 930 196 6 18 chr5 89058070 89058238 -114027294 + FRAM SINE Alu 1 166 0 1467 184 69 160 chr5 89058238 89058348 -114027184 - MLT2B1 LTR ERVL -401 119 1 2310 244 95 13 chr5 89058351 89058899 -114026633 - MLT1E LTR MaLR 0 593 1 508 251 149 34 chr5 89058902 89059225 -114026307 - L1MC4 LINE L1 -69 7973 7614 2029 228 116 14 chr5 89059326 89059617 -114025915 + L1ME3 LINE L1 4217 4477 -1669 1533 179 127 4 chr5 89059617 89059885 -114025647 + AluJo SINE Alu 2 302 0 2029 228 116 14 chr5 89059885 89060250 -114025282 + L1ME3 LINE L1 4477 4940 -1206 2233 155 23 26 chr5 89060252 89060653 -114024879 + MSTB1 LTR MaLR 1 335 -30 379 42 21 0 chr5 89060792 89060840 -114024692 + MSTB1 LTR MaLR 384 432 0 3161 203 67 48 chr5 89060856 89061233 -114024299 + L1ME3 LINE L1 4957 5325 -837 2426 152 59 27 chr5 89061233 89061642 -114023890 - MSTA LTR MaLR -2 426 5 3161 203 67 48 chr5 89061642 89062071 -114023461 + L1ME3 LINE L1 5325 5744 -418 2235 109 0 13 chr5 89062071 89062374 -114023158 - AluSx SINE Alu -13 299 1 3161 203 67 48 chr5 89062374 89062540 -114022992 + L1ME3 LINE L1 5744 5905 -257 579 29 0 0 chr5 89062540 89062609 -114022923 + (TA)n Simple_repeat Simple_repeat 1 69 0 3161 203 67 48 chr5 89062609 89062801 -114022731 + L1ME3 LINE L1 5905 6162 0 590 193 156 11 chr5 89062874 89063108 -114022424 - L1ME3A LINE L1 -151 6011 5722 2081 109 16 26 chr5 89063140 89063444 -114022088 - AluSp SINE Alu -6 307 7 207 0 0 0 chr5 89063459 89063482 -114022050 + (A)n Simple_repeat Simple_repeat 1 23 0 320 258 105 24 chr5 89063503 89063627 -114021905 - L1MC5 LINE L1 -567 7394 7261 473 185 58 46 chr5 89063691 89063864 -114021668 - L1ME3A LINE L1 -2374 5434 5260 2009 121 20 7 chr5 89064242 89064540 -114020992 - MSTC LTR MaLR -6 422 121 616 184 0 0 chr5 89066177 89066286 -114019246 + MLT2C1 LTR ERVL 1 109 -288 2733 174 27 6 chr5 89066290 89066777 -114018755 - MER39 LTR ERV1 0 707 211 249 93 67 147 chr5 89066779 89066815 -114018717 + MLT2C2 LTR ERVL 426 424 -40 234 0 0 0 chr5 89066815 89066841 -114018691 + (TA)n Simple_repeat Simple_repeat 2 27 0 249 93 67 147 chr5 89066841 89066879 -114018653 + MLT2C2 LTR ERVL 423 462 -2 1347 84 0 0 chr5 89066904 89067071 -114018461 - AluSp SINE Alu -13 300 134 1891 145 0 20 chr5 89067619 89067915 -114017617 - AluJo SINE Alu -22 290 1 1111 201 113 20 chr5 89068232 89068525 -114017007 + MLT1J2 LTR MaLR 1 320 -130 565 148 89 0 chr5 89068569 89068670 -114016862 + FLAM_A SINE Alu 33 142 0 429 240 10 0 chr5 89068684 89068784 -114016748 + MLT1J1 LTR MaLR 346 446 0 2196 123 0 0 chr5 89069293 89069593 -114015939 + AluSq SINE Alu 1 300 -13 251 248 264 24 chr5 89069879 89070004 -114015528 + MLT1L LTR MaLR 5 159 -456 296 226 155 12 chr5 89070027 89070111 -114015421 + MER5B DNA MER1_type 83 178 0 401 241 72 49 chr5 89070148 89070351 -114015181 + MLT1L LTR MaLR 111 383 -232 297 0 0 0 chr5 89070381 89070414 -114015118 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 228 286 0 16 chr5 89070433 89070496 -114015036 + MLT1L LTR MaLR 552 613 -2 2264 117 0 3 chr5 89070942 89071251 -114014281 + AluSx SINE Alu 1 308 -4 2207 155 24 42 chr5 89071437 89071748 -114013784 + THE1C LTR MaLR 2 306 -69 2314 74 0 10 chr5 89071748 89072071 -114013461 + AluY SINE Alu 1 311 0 2207 155 24 42 chr5 89072071 89072140 -114013392 + THE1C LTR MaLR 306 375 0 250 170 115 9 chr5 89072313 89072384 -114013148 + L1ME2 LINE L1 5751 5826 -357 987 249 67 11 chr5 89072500 89072769 -114012763 + MER93b LTR ERV1 90 373 0 1299 195 102 22 chr5 89072769 89073092 -114012440 + L1ME2 LINE L1 5802 6150 -14 227 301 60 45 chr5 89073121 89073320 -114012212 + L1MC4 LINE L1 7836 8037 -5 1673 115 25 118 chr5 89074078 89074241 -114011291 + AluSx SINE Alu 1 178 -134 1867 126 11 0 chr5 89074241 89074503 -114011029 + AluSx SINE Alu 1 265 -47 1640 81 14 0 chr5 89074509 89074732 -114010800 + AluSg/x SINE Alu 81 306 -4 1673 115 25 118 chr5 89074732 89074884 -114010648 + AluSx SINE Alu 183 293 -19 1200 142 15 29 chr5 89075243 89075447 -114010085 - AluJb SINE Alu -25 287 87 257 238 175 0 chr5 89075586 89075666 -114009866 - MER5A DNA MER1_type 0 189 96 369 270 148 37 chr5 89076059 89076248 -114009284 - HAL1 LINE L1 -2 2505 2296 * 436 270 175 29 chr5 89076234 89076690 -114008842 - HAL1 LINE L1 0 2507 1985 670 198 8 0 chr5 89076733 89076854 -114008678 - FLAM_A SINE Alu -11 122 1 981 213 66 0 chr5 89076912 89077156 -114008376 - HAL1 LINE L1 -726 1781 1522 1641 169 55 0 chr5 89077156 89077428 -114008104 - AluJb SINE Alu -25 287 1 400 243 150 14 chr5 89077497 89077637 -114007895 + L2 LINE L2 2489 2647 -667 22 0 0 0 chr5 89077639 89077661 -114007871 + AT_rich Low_complexity Low_complexity 1 22 0 1992 117 7 27 chr5 89077719 89078019 -114007513 + AluSq SINE Alu 2 295 -18 338 313 77 16 chr5 89078220 89078402 -114007130 + LTR16C LTR ERVL 299 491 0 374 291 103 23 chr5 89078412 89078587 -114006945 - L1ME LINE L1 -356 5765 5577 22 0 0 0 chr5 89078969 89078991 -114006541 + AT_rich Low_complexity Low_complexity 1 22 0 2073 112 4 0 chr5 89079779 89080056 -114005476 + AluSx SINE Alu 1 278 -34 2142 66 0 0 chr5 89080151 89080408 -114005124 - AluY SINE Alu -7 304 48 2261 97 3 19 chr5 89080784 89081095 -114004437 + AluSx SINE Alu 1 306 -6 3315 210 102 21 chr5 89082208 89083142 -114002390 + L1M4 LINE L1 3535 4543 -1603 2201 98 7 10 chr5 89083142 89083439 -114002093 - AluSx SINE Alu -11 301 6 919 115 0 0 chr5 89083462 89083592 -114001940 - L1PB1 LINE L1 -1 6150 6021 243 0 0 0 chr5 89084497 89084524 -114001008 + (CA)n Simple_repeat Simple_repeat 2 28 0 22 70 0 0 chr5 89084580 89084623 -114000909 + AT_rich Low_complexity Low_complexity 1 43 0 1491 185 46 0 chr5 89084693 89084952 -114000580 + Tigger7 DNA MER2_type 7 277 -456 2414 86 3 0 chr5 89084978 89085279 -114000253 + AluSp SINE Alu 1 302 -11 664 187 187 6 chr5 89085292 89085458 -114000074 - MER58A DNA MER1_type -8 216 21 1968 150 0 0 chr5 89085788 89086081 -113999451 - AluSx SINE Alu -6 306 14 2271 84 0 40 chr5 89086273 89086595 -113998937 + AluY SINE Alu 1 309 -2 1557 96 108 8 chr5 89086843 89087080 -113998452 + L1MA8 LINE L1 6001 6268 -23 288 0 0 0 chr5 89087080 89087112 -113998420 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 96 108 8 chr5 89087112 89087134 -113998398 + L1MA8 LINE L1 6268 6286 -5 1629 179 55 0 chr5 89087142 89087432 -113998100 + AluJo SINE Alu 1 306 -6 757 167 65 70 chr5 89088028 89088243 -113997289 + L1ME2 LINE L1 5951 6164 0 189 0 0 0 chr5 89088266 89088287 -113997245 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 2264 82 0 0 chr5 89088290 89088572 -113996960 - AluY SINE Alu -29 282 1 1406 120 69 9 chr5 89088981 89089198 -113996334 + MER30 DNA MER1_type 1 230 0 2170 107 0 7 chr5 89089816 89090106 -113995426 + AluSg SINE Alu 1 288 -22 407 289 78 8 chr5 89090582 89090710 -113994822 - MIR SINE MIR -103 159 23 13694 128 75 18 chr5 89091066 89091679 -113993853 + Tigger1 DNA MER2_type 24 601 -1817 2327 70 3 32 chr5 89091679 89091991 -113993541 + AluY SINE Alu 1 303 -8 13694 128 75 18 chr5 89091991 89092986 -113992546 + Tigger1 DNA MER2_type 601 1801 -617 2301 77 7 3 chr5 89092986 89093285 -113992247 + AluY SINE Alu 1 300 -11 13694 128 75 18 chr5 89093285 89093938 -113991594 + Tigger1 DNA MER2_type 1801 2415 -3 245 182 0 0 chr5 89093955 89093999 -113991533 + L1ME LINE L1 5777 5820 -301 222 281 146 0 chr5 89094100 89094196 -113991336 - L2 LINE L2 -4 3309 3200 1969 112 0 4 chr5 89094505 89094772 -113990760 + AluSx SINE Alu 1 266 -46 2412 168 23 11 chr5 89094772 89095206 -113990326 + MER65C LTR ERV1 23 461 0 416 294 101 37 chr5 89095459 89095677 -113989855 - MIR SINE MIR -6 256 25 2228 98 3 3 chr5 89095904 89096200 -113989332 - AluSg SINE Alu -14 296 1 898 176 21 31 chr5 89096212 89096405 -113989127 - L1MB7 LINE L1 -1 6183 5993 181 211 0 0 chr5 89096649 89096687 -113988845 + L2 LINE L2 3221 3258 -14 965 204 127 83 chr5 89097325 89097355 -113988177 + MLT2C1 LTR ERVL 19 46 -351 281 136 152 15 chr5 89097355 89097421 -113988111 + MLT1E3 LTR MaLR 69 143 -481 1234 141 184 24 chr5 89097419 89097674 -113987858 - AluSg1 SINE Alu -13 296 1 965 204 127 83 chr5 89097674 89097942 -113987590 + MLT2C1 LTR ERVL 299 397 0 2542 118 30 3 chr5 89098073 89098438 -113987094 + THE1C LTR MaLR 1 375 0 1033 153 0 0 chr5 89099379 89099529 -113986003 + MER6A DNA MER2_type 32 181 -424 * 1465 118 22 4 chr5 89099525 89099753 -113985779 + MER6A DNA MER2_type 371 602 -3 1701 196 51 20 chr5 89102356 89102708 -113982824 - MLT1A1 LTR MaLR -2 363 1 2934 169 39 7 chr5 89104440 89104977 -113980555 - MER68 LTR ERV1 -8 554 1 2147 89 4 7 chr5 89105225 89105506 -113980026 - AluSx SINE Alu -32 280 1 2201 104 3 3 chr5 89105752 89106040 -113979492 - AluSx SINE Alu -24 288 1 225 273 106 0 chr5 89106294 89106360 -113979172 + L2 LINE L2 3225 3297 -16 388 229 76 8 chr5 89106402 89106520 -113979012 - MARNA DNA Mariner -226 360 235 818 125 17 0 chr5 89107358 89107478 -113978054 - AluJb SINE Alu -190 122 1 281 269 122 55 chr5 89107483 89107721 -113977811 + L1M4 LINE L1 4733 4986 -1160 4187 155 84 53 chr5 89107824 89108845 -113976687 - L1MDa LINE L1 -4172 2368 1316 2179 105 6 19 chr5 89108845 89109158 -113976374 - AluSq SINE Alu -4 309 1 207 0 0 0 chr5 89109384 89109407 -113976125 + (T)n Simple_repeat Simple_repeat 1 23 0 1965 63 8 4 chr5 89109540 89109794 -113975738 + AluY SINE Alu 48 302 -9 1393 218 49 7 chr5 89109801 89110108 -113975424 - MER63B DNA MER1_type -106 330 11 180 77 0 0 chr5 89110443 89110469 -113975063 + (C)n Simple_repeat Simple_repeat 1 26 0 1863 107 0 4 chr5 89110961 89111224 -113974308 + AluY SINE Alu 50 311 0 2116 112 0 0 chr5 89111310 89111588 -113973944 - AluSx SINE Alu -34 278 1 774 180 16 0 chr5 89112071 89112199 -113973333 + AluJb SINE Alu 176 305 -7 321 295 164 29 chr5 89112241 89112448 -113973084 + MIR SINE MIR 8 242 -20 336 203 14 14 chr5 89112906 89112980 -113972552 + MIR SINE MIR 79 152 -110 212 338 25 12 chr5 89113093 89113173 -113972359 - MIR SINE MIR -90 172 92 1173 129 11 0 chr5 89114417 89114595 -113970937 + THE1C LTR MaLR 196 375 0 1033 153 0 0 chr5 89115536 89115686 -113969846 + MER6A DNA MER2_type 32 181 -424 * 1448 119 22 4 chr5 89115682 89115908 -113969624 + MER6A DNA MER2_type 371 600 -5 443 245 160 25 chr5 89116084 89116106 -113969426 + MIR SINE MIR 4 22 -240 2166 69 0 0 chr5 89116106 89116366 -113969166 + AluY SINE Alu 41 300 -11 443 245 160 25 chr5 89116366 89116543 -113968989 + MIR SINE MIR 22 230 -32 24 0 0 0 chr5 89118202 89118226 -113967306 + GC_rich Low_complexity Low_complexity 1 24 0 324 246 0 0 chr5 89118751 89118816 -113966716 - MIR SINE MIR -115 93 29 2278 112 3 0 chr5 89120750 89121054 -113964478 + AluSq SINE Alu 1 305 -8 2095 95 3 80 chr5 89121627 89121952 -113963580 - AluSx SINE Alu -12 300 1 1403 197 17 27 chr5 89122190 89122490 -113963042 - AluJo SINE Alu -14 298 2 2200 119 20 56 chr5 89122509 89122546 -113962986 - L1MB8 LINE L1 0 6178 6141 2232 112 0 0 chr5 89122546 89122842 -113962690 + AluSx SINE Alu 1 296 -16 2200 119 20 56 chr5 89122842 89123200 -113962332 - L1MB8 LINE L1 -37 6141 5797 1400 172 0 4 chr5 89123201 89123451 -113962081 - L1MB3 LINE L1 0 6183 5935 243 212 6 0 chr5 89123458 89123523 -113962009 - L1MB3 LINE L1 -338 5826 5760 2477 73 3 91 chr5 89123662 89123788 -113961744 - THE1A LTR MaLR -5 350 214 402 83 0 0 chr5 89123788 89123848 -113961684 - L1PA8 LINE L1 -1 6171 6112 2477 73 3 91 chr5 89123848 89124105 -113961427 - THE1A LTR MaLR -141 214 1 235 115 0 39 chr5 89124276 89124328 -113961204 - L1MEc LINE L1 -4919 1477 1428 2022 97 0 11 chr5 89124424 89124691 -113960841 - AluSg SINE Alu -46 264 1 1167 263 56 78 chr5 89124713 89125467 -113960065 - L1MEc LINE L1 -4999 1397 661 493 176 70 56 chr5 89125526 89125623 -113959909 + MER63 DNA MER1_type 769 870 -191 2280 148 17 9 chr5 89125623 89125968 -113959564 + MER7A DNA MER2_type 1 346 0 493 176 70 56 chr5 89125968 89126012 -113959520 + MER63 DNA MER1_type 870 912 -149 914 118 6 71 chr5 89126089 89126144 -113959388 - MER65C LTR ERV1 0 461 404 2336 99 0 0 chr5 89126144 89126438 -113959094 + AluSx SINE Alu 5 298 -14 914 118 6 71 chr5 89126438 89126551 -113958981 - MER65C LTR ERV1 -57 404 304 814 179 0 15 chr5 89126553 89126687 -113958845 + AluJ SINE Alu 2 133 -169 601 167 0 0 chr5 89126687 89126777 -113958755 + AluJ SINE Alu 133 222 -90 1920 150 29 3 chr5 89126778 89127085 -113958447 - MER65C LTR ERV1 -146 315 1 562 130 3 13 chr5 89127391 89127489 -113958043 - MER51A LTR ERV1 -81 553 438 1581 242 147 54 chr5 89127904 89128589 -113956943 - HAL1 LINE L1 -1755 752 4 185 340 32 70 chr5 89129051 89129236 -113956296 - MER5B DNA MER1_type 0 178 1 448 296 15 8 chr5 89129520 89129652 -113955880 - MER5B DNA MER1_type -3 175 43 814 208 13 0 chr5 89129656 89129805 -113955727 - FRAM SINE Alu -5 171 21 234 91 0 0 chr5 89129867 89129900 -113955632 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 642 123 57 0 chr5 89130597 89130703 -113954829 + L1PA15 LINE L1 6049 6160 -5 7968 159 111 34 chr5 89130994 89132624 -113952908 - MER52A LTR ERV1 0 1755 1 21 95 0 0 chr5 89133365 89133428 -113952104 + AT_rich Low_complexity Low_complexity 1 63 0 351 312 0 0 chr5 89133517 89133642 -113951890 - L1MC4 LINE L1 -1 8041 7917 2176 120 0 10 chr5 89134440 89134739 -113950793 + AluSx SINE Alu 2 297 -15 307 216 23 23 chr5 89135695 89135783 -113949749 - L1ME3A LINE L1 0 6170 6083 21 71 0 0 chr5 89135802 89135844 -113949688 + AT_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr5 89136518 89136541 -113948991 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1818 149 3 10 chr5 89136848 89137161 -113948371 + AluJb SINE Alu 1 312 0 831 161 0 14 chr5 89138338 89138481 -113947051 - FLAM_C SINE Alu -2 141 1 25 31 0 0 chr5 89138554 89138586 -113946946 + AT_rich Low_complexity Low_complexity 1 32 0 2228 122 159 24 chr5 89138920 89139297 -113946235 - MSTA LTR MaLR 0 428 1 2287 116 0 0 chr5 89139629 89139932 -113945600 - AluSq SINE Alu -10 303 1 324 333 123 9 chr5 89140589 89140817 -113944715 + L2 LINE L2 2212 2465 -849 940 269 108 11 chr5 89141326 89141698 -113943834 - L1ME3A LINE L1 -235 5935 5528 280 279 0 63 chr5 89141773 89141884 -113943648 + MIR SINE MIR 10 113 -149 387 259 27 18 chr5 89142165 89142277 -113943255 - MIR SINE MIR -73 189 77 740 205 0 8 chr5 89142852 89142979 -113942553 + FLAM_A SINE Alu 1 126 -7 215 385 28 18 chr5 89143249 89143358 -113942174 - L2 LINE L2 -36 3236 3127 2000 110 30 27 chr5 89143581 89143880 -113941652 + AluSx SINE Alu 1 300 -12 319 169 194 48 chr5 89143984 89144108 -113941424 - L1ME4a LINE L1 0 6121 5980 493 225 50 77 chr5 89144208 89144430 -113941102 - L1MC5 LINE L1 -35 7926 7711 846 279 123 21 chr5 89144434 89144767 -113940765 - L1ME4a LINE L1 -307 5814 5448 263 307 112 17 chr5 89144782 89144961 -113940571 - Tigger8 DNA MER2_type -7 659 464 609 246 92 31 chr5 89144962 89145190 -113940342 + L1ME LINE L1 5565 5806 -315 31 68 0 0 chr5 89145220 89145279 -113940253 + AT_rich Low_complexity Low_complexity 1 59 0 377 181 11 21 chr5 89145302 89145396 -113940136 - Tigger8 DNA MER2_type -365 301 209 696 230 93 20 chr5 89145779 89145983 -113939549 + MIR SINE MIR 7 225 -37 29 0 0 0 chr5 89146010 89146039 -113939493 + AT_rich Low_complexity Low_complexity 1 29 0 1153 103 0 0 chr5 89146043 89146188 -113939344 + AluSg SINE Alu 1 145 -165 13425 155 48 14 chr5 89146195 89149906 -113935626 - L1MA3 LINE L1 -7 6298 2453 1830 93 4 37 chr5 89149906 89150174 -113935358 - AluSx SINE Alu -7 305 47 13425 155 48 14 chr5 89150174 89150250 -113935282 - L1MA3 LINE L1 -3852 2453 2381 22 0 0 0 chr5 89150437 89150459 -113935073 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 89152963 89152999 -113932533 + AT_rich Low_complexity Low_complexity 1 36 0 212 75 0 25 chr5 89153327 89153367 -113932165 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 269 116 0 0 chr5 89153367 89153410 -113932122 - L1MC1 LINE L1 -24 6309 6267 1204 180 0 107 chr5 89153520 89153820 -113931712 - AluJo SINE Alu -36 276 9 1949 110 7 38 chr5 89153912 89154226 -113931306 - AluSx SINE Alu 0 305 1 464 215 131 15 chr5 89154397 89154527 -113931005 - MER112 DNA MER1_type -43 217 73 30 83 0 0 chr5 89154594 89154666 -113930866 + AT_rich Low_complexity Low_complexity 1 72 0 602 277 91 19 chr5 89154766 89155141 -113930391 + L1M4 LINE L1 4193 4594 -1552 268 273 61 0 chr5 89155197 89155296 -113930236 + L1M4 LINE L1 4582 4686 -1460 225 106 43 0 chr5 89155341 89155388 -113930144 + L1MC4 LINE L1 6655 6703 -1339 23 0 0 0 chr5 89155391 89155414 -113930118 + AT_rich Low_complexity Low_complexity 1 23 0 239 193 0 18 chr5 89155421 89155478 -113930054 + (TATAA)n Simple_repeat Simple_repeat 2 57 0 511 260 6 17 chr5 89155486 89155663 -113929869 + (TATATG)n Simple_repeat Simple_repeat 6 180 0 244 208 21 0 chr5 89155664 89155760 -113929772 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 228 277 0 0 chr5 89155787 89155964 -113929568 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 303 294 35 0 chr5 89156011 89156096 -113929436 + L1MC4 LINE L1 6614 6701 -1341 446 243 0 0 chr5 89156097 89156200 -113929332 + (TA)n Simple_repeat Simple_repeat 1 103 0 353 269 6 0 chr5 89156207 89156378 -113929154 + (TATATG)n Simple_repeat Simple_repeat 6 177 0 530 189 0 43 chr5 89156431 89156616 -113928916 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 303 219 0 16 chr5 89156634 89156698 -113928834 - L1MCa LINE L1 -4358 2068 2006 2106 120 0 10 chr5 89156726 89157018 -113928514 - AluSx SINE Alu -23 289 1 271 298 98 30 chr5 89157023 89157258 -113928274 + L1M4 LINE L1 4733 4983 -1163 8207 180 141 31 chr5 89157364 89158386 -113927146 - L1MDa LINE L1 -4172 2368 1460 2185 117 7 0 chr5 89158386 89158693 -113926839 - AluSq SINE Alu -4 309 1 8207 180 141 31 chr5 89158693 89159786 -113925746 - L1MDa LINE L1 -5080 1460 19 250 263 34 8 chr5 89160546 89160664 -113924868 - MER113 DNA MER1_type? -397 124 4 1538 198 28 3 chr5 89160971 89161259 -113924273 - AluJo SINE Alu -17 295 1 339 316 151 36 chr5 89161340 89161618 -113923914 - L2 LINE L2 0 3272 2963 2435 38 10 16 chr5 89161699 89162012 -113923520 + L1PA5 LINE L1 5836 6146 -8 361 291 60 17 chr5 89162113 89162230 -113923302 + L2 LINE L2 3149 3270 -2 2193 121 3 0 chr5 89162333 89162638 -113922894 + AluSx SINE Alu 1 306 -6 21 36 0 0 chr5 89162789 89162817 -113922715 + AT_rich Low_complexity Low_complexity 1 28 0 1916 129 0 4 chr5 89163154 89163426 -113922106 + AluSx SINE Alu 1 271 -41 201 186 23 0 chr5 89164270 89164313 -113921219 + GA-rich Low_complexity Low_complexity 3 46 0 201 345 59 17 chr5 89164357 89164476 -113921056 - MIR SINE MIR -76 186 63 28 0 0 0 chr5 89165129 89165157 -113920375 + AT_rich Low_complexity Low_complexity 1 28 0 335 209 0 45 chr5 89165570 89165637 -113919895 - Charlie5 DNA MER1_type -2548 64 1 26 0 0 0 chr5 89165757 89165783 -113919749 + AT_rich Low_complexity Low_complexity 1 26 0 1852 139 0 0 chr5 89165786 89166060 -113919472 + AluSx SINE Alu 1 274 -38 328 239 44 9 chr5 89166078 89166191 -113919341 - MIR SINE MIR 0 262 146 225 303 0 0 chr5 89166898 89166964 -113918568 - L1 LINE L1 -2020 4126 4061 498 246 241 10 chr5 89167970 89168173 -113917359 + MIR SINE MIR 3 252 -10 341 175 32 0 chr5 89168325 89168388 -113917144 - MER5B DNA MER1_type -4 174 110 379 279 59 22 chr5 89168396 89168532 -113917000 - MER63A DNA MER1_type -6 204 64 1673 183 27 73 chr5 89168619 89169028 -113916504 - MLT1B LTR MaLR 0 390 1 2649 234 82 28 chr5 89169922 89170495 -113915037 - L1ME2 LINE L1 -2 6556 6015 1765 164 0 29 chr5 89170495 89170805 -113914727 + AluJo SINE Alu 1 301 -11 2649 234 82 28 chr5 89170805 89171475 -113914057 - L1ME2 LINE L1 -543 6015 5261 829 136 43 0 chr5 89171509 89171649 -113913883 - AluJo SINE Alu -9 303 158 405 167 0 15 chr5 89171651 89171717 -113913815 - AluJo SINE Alu -177 125 61 1988 137 14 0 chr5 89171831 89172123 -113913409 - AluSx SINE Alu -10 302 7 315 0 0 0 chr5 89172264 89172299 -113913233 + (TG)n Simple_repeat Simple_repeat 2 36 0 2390 55 0 42 chr5 89172392 89172701 -113912831 + AluY SINE Alu 1 296 -15 841 265 36 18 chr5 89173132 89173355 -113912177 - MIR SINE MIR -5 257 31 2168 123 3 0 chr5 89174699 89175008 -113910524 - AluSx SINE Alu -2 310 1 361 222 68 131 chr5 89175427 89175872 -113909660 - L1ME2 LINE L1 -3873 2848 2404 230 313 108 42 chr5 89176848 89177014 -113908518 - MER5A DNA MER1_type -6 183 7 2345 105 0 0 chr5 89177185 89177490 -113908042 - AluSx SINE Alu -7 305 1 256 267 78 43 chr5 89178091 89178207 -113907325 + MIR SINE MIR 31 150 -112 402 231 34 51 chr5 89178254 89178371 -113907161 - L2 LINE L2 0 3313 3199 313 284 25 0 chr5 89178380 89178461 -113907071 - L2 LINE L2 -240 3073 2991 21 57 0 0 chr5 89178467 89178502 -113907030 + AT_rich Low_complexity Low_complexity 1 35 0 2388 108 129 5 chr5 89178603 89178984 -113906548 - MSTA LTR MaLR 0 428 1 691 173 8 0 chr5 89179487 89179614 -113905918 - FLAM_A SINE Alu -1 132 5 4891 147 72 36 chr5 89179651 89180329 -113905203 - L1MA4 LINE L1 -5 6295 5569 1371 188 62 14 chr5 89180329 89180605 -113904927 - AluJo SINE Alu -23 289 1 4891 147 72 36 chr5 89180605 89180919 -113904613 - L1MA4 LINE L1 -731 5569 5268 295 240 67 10 chr5 89181129 89181233 -113904299 - L1ME3 LINE L1 -88 6074 5965 23 0 0 29 chr5 89181331 89181350 -113904182 + AT_rich Low_complexity Low_complexity 1 20 -13 641 207 8 8 chr5 89181350 89181471 -113904061 - FLAM_A SINE Alu -12 121 1 23 0 0 29 chr5 89181471 89181485 -113904047 + AT_rich Low_complexity Low_complexity 20 33 0 762 185 68 102 chr5 89181487 89181811 -113903721 - L1MC5 LINE L1 -440 7521 7209 726 201 46 93 chr5 89181845 89182104 -113903428 - L1MC5 LINE L1 -1002 6959 6713 2383 88 0 0 chr5 89182104 89182400 -113903132 - AluSc SINE Alu -13 296 1 25 0 0 0 chr5 89182661 89182686 -113902846 + AT_rich Low_complexity Low_complexity 1 25 0 906 214 0 0 chr5 89182909 89183082 -113902450 - MER5A DNA MER1_type -2 187 15 379 316 48 5 chr5 89183082 89183269 -113902263 - HAL1b LINE L1 -788 560 366 691 271 67 52 chr5 89183911 89184239 -113901293 - L1ME1 LINE L1 -2 6164 5832 491 288 74 37 chr5 89185720 89185876 -113899656 + L1MB1 LINE L1 4439 4588 -1558 1567 148 59 19 chr5 89185876 89186187 -113899345 + AluJb SINE Alu 1 322 0 491 288 74 37 chr5 89186187 89186405 -113899127 + L1MB1 LINE L1 4588 4830 -1316 22 56 0 0 chr5 89186571 89186607 -113898925 + AT_rich Low_complexity Low_complexity 1 36 0 1891 138 31 10 chr5 89186820 89187110 -113898422 - AluJb SINE Alu -16 296 1 23 33 0 0 chr5 89187183 89187213 -113898319 + AT_rich Low_complexity Low_complexity 1 30 0 333 268 56 30 chr5 89187224 89187439 -113898093 + L1MB1 LINE L1 5723 5942 -179 2510 74 0 3 chr5 89187986 89188298 -113897234 + AluY SINE Alu 1 311 0 826 146 0 28 chr5 89188776 89188920 -113896612 + FRAM SINE Alu 22 161 -15 1922 147 10 10 chr5 89189523 89189823 -113895709 - AluJo SINE Alu -12 300 1 1480 235 101 21 chr5 89190693 89191360 -113894172 - L2 LINE L2 0 3313 2596 228 353 41 0 chr5 89191371 89191541 -113893991 - L1MC/D LINE L1 -1918 5890 5714 24 67 0 0 chr5 89191834 89191879 -113893653 + AT_rich Low_complexity Low_complexity 1 45 0 2425 54 7 3 chr5 89192187 89192484 -113893048 + AluY SINE Alu 1 298 -13 279 0 0 0 chr5 89192484 89192515 -113893017 + (TG)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr5 89192514 89192534 -113892998 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 349 288 98 33 chr5 89193171 89193386 -113892146 + L1ME3A LINE L1 5734 5962 -208 2332 101 3 3 chr5 89193948 89194256 -113891276 - AluSx SINE Alu -4 308 1 228 273 106 0 chr5 89194510 89194576 -113890956 + L2 LINE L2 3225 3297 -16 380 226 78 9 chr5 89194621 89194736 -113890796 - MARNA DNA Mariner -229 357 235 487 214 10 0 chr5 89195524 89195622 -113889910 + MER20 DNA MER1_type 99 197 -22 993 250 82 8 chr5 89195624 89195976 -113889556 + L1MB7 LINE L1 3661 4038 -2108 4259 185 82 31 chr5 89195984 89197525 -113888007 + L1MB7 LINE L1 4544 6172 -12 597 295 74 15 chr5 89197602 89197873 -113887659 - L1MEc LINE L1 -5776 620 334 310 313 28 28 chr5 89197892 89198071 -113887461 - L1MEc LINE L1 -6182 214 36 2253 109 7 0 chr5 89198156 89198457 -113887075 + AluSx SINE Alu 1 303 -9 1813 145 3 19 chr5 89198457 89198767 -113886765 + AluSx SINE Alu 1 305 -7 2134 92 3 7 chr5 89198996 89199279 -113886253 + AluSx SINE Alu 1 282 -30 2887 169 39 7 chr5 89199525 89200062 -113885470 + MER68 LTR ERV1 1 554 -8 1558 204 48 17 chr5 89201794 89202146 -113883386 + MLT1A1 LTR MaLR 1 363 -2 2317 89 0 16 chr5 89203399 89203713 -113881819 - AluSc SINE Alu 0 309 1 2119 125 0 3 chr5 89203767 89204070 -113881462 - AluSx SINE Alu -10 302 1 2265 110 0 13 chr5 89205059 89205369 -113880163 - AluSx SINE Alu -6 306 1 182 295 16 33 chr5 89206495 89206556 -113878976 + L2 LINE L2 3141 3200 -72 2865 0 0 0 chr5 89206622 89206928 -113878604 + AluY SINE Alu 1 306 -5 262 228 35 0 chr5 89207416 89207473 -113878059 - L2 LINE L2 0 3272 3214 772 241 12 0 chr5 89208217 89208383 -113877149 - MER5B DNA MER1_type 0 178 11 342 148 0 0 chr5 89208393 89208447 -113877085 + L2 LINE L2 3214 3267 -5 366 280 153 13 chr5 89208471 89208621 -113876911 - MIR SINE MIR -64 198 28 199 330 119 0 chr5 89208700 89208809 -113876723 + MIR SINE MIR 67 188 -74 278 315 18 27 chr5 89208812 89208923 -113876609 - MIR SINE MIR -18 244 135 1520 179 127 7 chr5 89210715 89211022 -113874510 + MER7A DNA MER2_type 2 343 -3 378 0 0 0 chr5 89211751 89211793 -113873739 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr5 89212083 89212104 -113873428 + AT_rich Low_complexity Low_complexity 1 21 0 2098 162 52 28 chr5 89212144 89212671 -113872861 - MLT2A2 LTR ERVL 0 554 1 5339 147 37 13 chr5 89212671 89213138 -113872394 - L1MA7 LINE L1 -32 6259 5805 306 0 0 0 chr5 89213138 89213172 -113872360 + (TG)n Simple_repeat Simple_repeat 2 35 0 5339 147 37 13 chr5 89213172 89213830 -113871702 - L1MA7 LINE L1 -486 5805 5107 287 301 27 96 chr5 89213877 89214023 -113871509 + L2 LINE L2 2933 3068 -245 1913 108 0 7 chr5 89214120 89214406 -113871126 + HSMAR2 DNA Mariner 1 284 -1018 681 167 0 0 chr5 89214407 89214521 -113871011 + L1P LINE L1 4820 4933 -1213 1781 194 55 3 chr5 89214521 89214888 -113870644 - MLT1C LTR MaLR -81 386 1 25 0 0 0 chr5 89215193 89215218 -113870314 + AT_rich Low_complexity Low_complexity 1 25 0 599 271 111 10 chr5 89215554 89215753 -113869779 + MIR SINE MIR 18 236 -26 306 259 86 25 chr5 89215781 89215943 -113869589 + L1ME1 LINE L1 5710 5881 -285 25 0 0 0 chr5 89216112 89216137 -113869395 + AT_rich Low_complexity Low_complexity 1 25 0 772 275 80 62 chr5 89216663 89217099 -113868433 - MLT1J1 LTR MaLR 0 446 3 605 288 62 21 chr5 89218623 89218863 -113866669 + L1MEd LINE L1 59 308 -5811 380 294 73 0 chr5 89218923 89219059 -113866473 + L1MEd LINE L1 425 570 -5549 326 125 16 0 chr5 89219196 89219260 -113866272 + L1PB2 LINE L1 6087 6151 0 234 379 0 0 chr5 89219424 89219511 -113866021 + L2 LINE L2 2586 2672 -642 233 289 30 152 chr5 89219548 89219884 -113865648 + L2 LINE L2 2978 3272 0 1595 104 24 0 chr5 89220150 89220401 -113865131 - L1MA3 LINE L1 -2 6303 6047 637 301 111 13 chr5 89221389 89221615 -113863917 - MIR SINE MIR -2 260 13 819 352 55 49 chr5 89222225 89222874 -113862658 - L2 LINE L2 -86 3186 2543 219 167 0 0 chr5 89223243 89223285 -113862247 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 451 209 170 44 chr5 89223668 89223850 -113861682 - MLT1J1 LTR MaLR 0 446 242 * 666 233 75 0 chr5 89223849 89224008 -113861524 - MLT1J2 LTR MaLR -224 226 56 1771 170 6 63 chr5 89224114 89224478 -113861054 - MER61A LTR ERV1 0 343 1 32 0 0 0 chr5 89225302 89225334 -113860198 + AT_rich Low_complexity Low_complexity 1 32 0 222 118 0 0 chr5 89225481 89225515 -113860017 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 2190 109 0 0 chr5 89225790 89226206 -113859326 - AluSq SINE Alu 0 416 1 1443 174 85 41 chr5 89227429 89227722 -113857810 - AluJb SINE Alu -6 306 1 1036 198 129 63 chr5 89228686 89229019 -113856513 - HAL1 LINE L1 -575 1932 1578 450 206 80 60 chr5 89229010 89229209 -113856323 - HAL1 LINE L1 -1357 1150 948 * 653 283 117 0 chr5 89229237 89229393 -113856139 - HAL1 LINE L1 -2229 278 142 2329 100 3 0 chr5 89229393 89229702 -113855830 - AluSg SINE Alu 0 310 1 653 283 117 0 chr5 89229702 89229792 -113855740 - HAL1 LINE L1 -2365 142 3 24 53 0 0 chr5 89229941 89229979 -113855553 + AT_rich Low_complexity Low_complexity 1 38 0 203 169 0 51 chr5 89230021 89230080 -113855452 + (TA)n Simple_repeat Simple_repeat 2 57 0 633 307 102 19 chr5 89230105 89230633 -113854899 - L1MC4a LINE L1 -1959 5849 5278 183 339 9 22 chr5 89233360 89233470 -113852062 + MIR SINE MIR 49 212 -50 296 336 130 7 chr5 89233532 89233678 -113851854 - MIR SINE MIR -12 250 87 1671 177 21 0 chr5 89234270 89234552 -113850980 + AluJo SINE Alu 10 297 -15 298 106 15 15 chr5 89235010 89235076 -113850456 + (TATG)n Simple_repeat Simple_repeat 3 68 0 21 0 0 0 chr5 89236780 89236801 -113848731 + AT_rich Low_complexity Low_complexity 1 21 0 2392 103 0 0 chr5 89236816 89237127 -113848405 - AluSx SINE Alu -1 311 1 5562 108 20 14 chr5 89237286 89238168 -113847364 + L1MA3 LINE L1 5418 6305 0 21 0 0 0 chr5 89238378 89238399 -113847133 + AT_rich Low_complexity Low_complexity 1 21 0 2133 117 0 10 chr5 89238950 89239249 -113846283 - AluSx SINE Alu -16 296 1 233 109 62 0 chr5 89239924 89239988 -113845544 + (TA)n Simple_repeat Simple_repeat 1 68 0 1648 130 39 0 chr5 89239988 89240242 -113845290 - AluSx SINE Alu -9 303 40 207 69 0 0 chr5 89240927 89240956 -113844576 + (CCA)n Simple_repeat Simple_repeat 3 31 0 554 256 93 32 chr5 89240964 89241182 -113844350 - MIR SINE MIR -37 225 8 2242 119 0 3 chr5 89242040 89242352 -113843180 - AluSx SINE Alu -1 311 1 842 264 73 45 chr5 89242394 89242610 -113842922 - L1MC4 LINE L1 -60 7982 7773 2149 90 3 45 chr5 89242610 89242922 -113842610 - AluY SINE Alu -12 299 1 842 264 73 45 chr5 89242922 89243170 -113842362 - L1MC4 LINE L1 -269 7773 7505 816 218 101 0 chr5 89243202 89243390 -113842142 + MER63A DNA MER1_type 4 210 0 368 294 124 17 chr5 89243391 89243568 -113841964 - MIR SINE MIR -47 215 20 2053 125 7 3 chr5 89243644 89243941 -113841591 + AluSx SINE Alu 1 298 -14 1193 187 44 4 chr5 89244535 89244760 -113840772 - AluJb SINE Alu -11 301 68 302 67 67 0 chr5 89245140 89245185 -113840347 - L1M LINE L1 -794 5384 5337 * 400 216 65 81 chr5 89245182 89245301 -113840231 + L1ME4a LINE L1 1183 1302 -4817 1989 157 6 23 chr5 89245301 89245651 -113839881 - MER2 DNA MER2_type 0 344 1 400 216 65 81 chr5 89245651 89245706 -113839826 + L1ME4a LINE L1 1302 6117 -2 25 51 0 0 chr5 89246090 89246129 -113839403 + AT_rich Low_complexity Low_complexity 1 39 0 2161 121 0 10 chr5 89246992 89247299 -113838233 + AluSx SINE Alu 6 309 -3 207 0 0 0 chr5 89247302 89247325 -113838207 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr5 89247454 89247477 -113838055 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1977 86 18 0 chr5 89247478 89247756 -113837776 - L1MA1 LINE L1 -4 6298 6016 316 125 0 0 chr5 89248356 89248404 -113837128 - tRNA-Arg-CGC tRNA tRNA -26 50 3 6482 15 0 44 chr5 89248404 89249204 -113836328 + L1PA3 LINE L1 5380 6144 -11 180 97 0 0 chr5 89249204 89249235 -113836297 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 222 267 139 0 chr5 89249370 89249456 -113836076 + MIR SINE MIR 89 186 -76 346 313 15 53 chr5 89250074 89250205 -113835327 - L2 LINE L2 -9 3263 3138 2027 114 3 27 chr5 89251214 89251511 -113834021 + AluSc SINE Alu 1 290 -19 1913 137 28 0 chr5 89251593 89251877 -113833655 + AluJo SINE Alu 6 297 -15 2229 124 0 0 chr5 89252428 89252727 -113832805 - AluSx SINE Alu -10 302 4 845 299 54 15 chr5 89252913 89253303 -113832229 + L1MC/D LINE L1 5353 5760 -593 6011 178 59 24 chr5 89253382 89254784 -113830748 + Looper DNA T2_type 107 1558 0 1032 199 0 6 chr5 89255312 89255488 -113830044 + FAM SINE Alu 1 175 0 700 312 81 53 chr5 89256363 89256796 -113828736 - L2 LINE L2 -1 3271 2827 1166 218 226 42 chr5 89256915 89257414 -113828118 - MER67B LTR ERV1 0 661 71 373 205 0 39 chr5 89257469 89257547 -113827985 - MER67A LTR ERV1 -454 89 15 465 319 113 32 chr5 89257591 89258159 -113827373 - L2 LINE L2 -2411 903 213 1717 143 94 54 chr5 89258358 89258709 -113826823 - MLT1A1 LTR MaLR 0 365 1 1430 125 134 0 chr5 89258826 89259058 -113826474 + AluSx SINE Alu 37 299 -13 200 100 75 0 chr5 89259253 89259293 -113826239 + CT-rich Low_complexity Low_complexity 1 43 0 448 262 48 157 chr5 89259973 89260450 -113825082 + L2 LINE L2 2846 3270 -2 356 328 35 9 chr5 89262079 89262195 -113823337 + MIR3 SINE MIR 42 160 -48 288 0 0 0 chr5 89262560 89262592 -113822940 + (T)n Simple_repeat Simple_repeat 1 32 0 578 239 86 31 chr5 89262827 89262990 -113822542 + MIR SINE MIR 58 229 -33 674 267 117 33 chr5 89263787 89264353 -113821179 - L2 LINE L2 -18 3295 2614 435 186 12 23 chr5 89264841 89264927 -113820605 - MIR3 SINE MIR -41 167 83 277 143 41 0 chr5 89265184 89265233 -113820299 - L1ME4a LINE L1 -105 6016 5966 428 231 39 0 chr5 89265263 89265393 -113820139 - L1ME4a LINE L1 -213 5908 5774 6568 125 26 14 chr5 89265491 89267298 -113818234 - L1MA3 LINE L1 -10 7714 5889 712 160 0 0 chr5 89267301 89267407 -113818125 + L1M1 LINE L1 1582 1687 -5878 * 3369 132 18 0 chr5 89267405 89267899 -113817633 - L1MA3 LINE L1 -5504 2061 1559 2025 123 27 0 chr5 89268653 89268946 -113816586 - AluSx SINE Alu -11 301 1 1194 297 77 51 chr5 89268951 89269171 -113816361 - L1ME4a LINE L1 -960 5186 4973 2283 74 7 0 chr5 89269171 89269456 -113816076 - AluSp SINE Alu -26 287 1 1194 297 77 51 chr5 89269456 89269934 -113815598 - L1ME4a LINE L1 -1173 4973 4509 4437 156 67 21 chr5 89269934 89269980 -113815552 - MER6 DNA MER2_type 0 865 823 1713 179 40 0 chr5 89269980 89270277 -113815255 + AluJb SINE Alu 1 309 -3 4437 156 67 21 chr5 89270277 89271057 -113814475 - MER6 DNA MER2_type -42 823 1 1194 297 77 51 chr5 89271057 89271532 -113814000 - L1ME4a LINE L1 -1637 4509 3982 225 0 0 0 chr5 89271918 89271943 -113813589 + (TA)n Simple_repeat Simple_repeat 2 26 0 23 54 0 0 chr5 89272148 89272185 -113813347 + AT_rich Low_complexity Low_complexity 1 37 0 222 37 0 0 chr5 89273228 89273255 -113812277 + (TA)n Simple_repeat Simple_repeat 2 28 0 397 251 43 68 chr5 89273373 89273585 -113811947 - L1ME LINE L1 -393 5769 5564 * 800 242 24 5 chr5 89273565 89273930 -113811602 - L1ME LINE L1 -1202 4944 4374 733 170 180 34 chr5 89273952 89274158 -113811374 + MER46A DNA MER2_type 1 236 0 279 277 175 11 chr5 89274158 89274335 -113811197 - L1ME LINE L1 -1794 4352 4147 1126 234 140 11 chr5 89274346 89274811 -113810721 - L1ME LINE L1 -2197 3949 3425 214 260 19 39 chr5 89274953 89275057 -113810475 + T-rich Low_complexity Low_complexity 6 107 0 1667 132 95 0 chr5 89275644 89275917 -113809615 - AluSx SINE Alu -13 299 1 1508 144 136 4 chr5 89276938 89277202 -113808330 + AluJb SINE Alu 1 299 -3 2075 142 3 0 chr5 89277319 89277630 -113807902 - AluSq SINE Alu -1 312 1 195 129 0 0 chr5 89278429 89278460 -113807072 + (A)n Simple_repeat Simple_repeat 1 31 0 352 263 76 84 chr5 89278613 89278871 -113806661 - MLT1L LTR MaLR -170 415 96 360 288 209 45 chr5 89279148 89279478 -113806054 - L2 LINE L2 0 3313 2930 1346 318 102 30 chr5 89279566 89280522 -113805010 - L2 LINE L2 -541 2773 1749 32 26 0 0 chr5 89280607 89280646 -113804886 + AT_rich Low_complexity Low_complexity 1 39 0 2197 215 23 87 chr5 89280759 89280987 -113804545 + L1MC5 LINE L1 7090 7331 -630 2071 110 3 33 chr5 89280987 89281287 -113804245 + AluSx SINE Alu 1 291 -21 2197 215 23 87 chr5 89281287 89281941 -113803591 + L1MC5 LINE L1 7331 7915 -46 318 256 98 0 chr5 89282405 89282487 -113803045 + L1MC4 LINE L1 6614 6703 -1339 303 333 0 0 chr5 89282417 89282507 -113803025 - L1MC4 LINE L1 -1339 6703 6614 * 180 0 0 0 chr5 89282507 89282527 -113803005 + (TG)n Simple_repeat Simple_repeat 2 21 0 2301 88 0 26 chr5 89282541 89282846 -113802686 - AluSq SINE Alu -16 297 1 194 256 23 0 chr5 89282987 89283030 -113802502 - L2 LINE L2 -92 3180 3137 278 355 122 0 chr5 89283511 89283618 -113801914 + L2 LINE L2 3151 3270 -2 351 296 111 25 chr5 89284039 89284201 -113801331 + MIR SINE MIR 87 262 0 629 203 80 31 chr5 89284728 89284891 -113800641 + LTR40c LTR ERVL 7 177 -288 703 214 185 23 chr5 89284920 89285093 -113800439 + LTR40a LTR ERVL 319 519 0 553 280 104 28 chr5 89285289 89285500 -113800032 + MIR SINE MIR 36 262 0 207 368 0 0 chr5 89285586 89285654 -113799878 + MIR SINE MIR 117 184 -78 546 251 11 102 chr5 89286657 89286745 -113798787 - MER5B DNA MER1_type -7 171 77 261 0 0 0 chr5 89286745 89286774 -113798758 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5663 48 32 15 chr5 89286774 89287516 -113798016 - SVA Other Other -19 1367 613 546 251 11 102 chr5 89287516 89287613 -113797919 - MER5B DNA MER1_type -99 79 2 323 331 59 24 chr5 89287780 89287949 -113797583 - L1MC4 LINE L1 -1871 5937 5763 326 325 152 19 chr5 89288381 89288757 -113796775 - L1ME3A LINE L1 -223 5947 5522 325 330 104 17 chr5 89289134 89289307 -113796225 + MER5A DNA MER1_type 2 189 0 267 220 0 0 chr5 89289509 89289559 -113795973 - L2 LINE L2 -8 3305 3256 2378 100 0 0 chr5 89289608 89289908 -113795624 - AluSq SINE Alu -13 300 1 1175 130 28 28 chr5 89290948 89291163 -113794369 - L1MC1 LINE L1 0 6333 6119 1740 164 78 46 chr5 89291163 89291534 -113793998 - MSTC LTR MaLR -45 383 1 1971 252 65 29 chr5 89291534 89292129 -113793403 - MSTC-int LTR MaLR 0 1651 1035 978 136 7 0 chr5 89292129 89292276 -113793256 - MSTC LTR MaLR -280 148 1 4455 231 13 4 chr5 89292279 89293360 -113792172 - L1M4 LINE L1 -1980 4166 3076 234 220 80 0 chr5 89293376 89293426 -113792106 + MER5A DNA MER1_type 136 189 0 442 233 0 0 chr5 89294068 89294158 -113791374 - Tigger5 DNA MER2_type 0 2323 2234 22 0 0 0 chr5 89294168 89294190 -113791342 + AT_rich Low_complexity Low_complexity 1 22 0 233 170 0 0 chr5 89294332 89294379 -113791153 - L1ME4a LINE L1 0 6121 6075 2557 51 0 6 chr5 89294886 89295199 -113790333 + AluY SINE Alu 1 311 0 1026 158 37 98 chr5 89295222 89295398 -113790134 + L1MB4 LINE L1 5896 6048 -132 1906 143 14 0 chr5 89295398 89295691 -113789841 + AluSx SINE Alu 1 297 -15 1026 158 37 98 chr5 89295691 89295811 -113789721 + L1MB4 LINE L1 6048 6174 -6 2437 78 0 0 chr5 89296493 89296800 -113788732 - AluSc SINE Alu -2 307 1 46 0 0 0 chr5 89297387 89297433 -113788099 + AT_rich Low_complexity Low_complexity 1 46 0 595 180 33 0 chr5 89297433 89297555 -113787977 + L1MB4 LINE L1 6049 6174 -6 32 75 0 0 chr5 89297623 89297690 -113787842 + AT_rich Low_complexity Low_complexity 1 67 0 227 129 43 43 chr5 89297693 89297763 -113787769 + A-rich Low_complexity Low_complexity 5 74 0 47 33 0 0 chr5 89297708 89297769 -113787763 + AT_rich Low_complexity Low_complexity 1 61 0 * 340 336 60 27 chr5 89297940 89298089 -113787443 + MIR3 SINE MIR 29 182 -26 2106 131 14 0 chr5 89298692 89298989 -113786543 + AluSx SINE Alu 1 301 -11 219 241 63 51 chr5 89299352 89299431 -113786101 - L2 LINE L2 -4 3268 3189 377 139 0 25 chr5 89299621 89299636 -113785896 + L1MB7 LINE L1 6103 6117 -67 1194 203 139 0 chr5 89299636 89299937 -113785595 + MER2 DNA MER2_type 2 344 0 377 139 0 25 chr5 89299937 89300000 -113785532 + L1MB7 LINE L1 6117 6179 -5 300 340 33 33 chr5 89300078 89300228 -113785304 - L2 LINE L2 -467 2847 2698 2039 148 3 0 chr5 89300356 89300654 -113784878 + AluJb SINE Alu 1 299 -13 2169 225 82 25 chr5 89300744 89301305 -113784227 - MLT1E LTR MaLR 0 593 1 475 292 144 15 chr5 89301348 89301565 -113783967 + MIR SINE MIR 12 252 -10 414 315 21 21 chr5 89301748 89301891 -113783641 - MIR3 SINE MIR -49 159 17 2017 154 0 3 chr5 89302144 89302443 -113783089 + AluSx SINE Alu 1 298 -14 198 245 49 88 chr5 89302637 89302739 -113782793 - L2 LINE L2 -5 3267 3170 273 278 83 26 chr5 89302943 89303191 -113782341 - HAL1b LINE L1 -86 2421 769 244 27 27 0 chr5 89303332 89303369 -113782163 + L1P LINE L1 4858 4895 -1251 1112 121 78 0 chr5 89303487 89303653 -113781879 - AluSg/x SINE Alu -13 299 121 1976 59 4 0 chr5 89303663 89303950 -113781582 - L1PA6 LINE L1 -8 6146 5769 35035 94 8 8 chr5 89303969 89310107 -113775425 - L1PA5 LINE L1 -4 6150 11 1915 147 21 0 chr5 89310128 89310413 -113775119 - AluSx SINE Alu -21 291 1 878 293 85 102 chr5 89310416 89311009 -113774523 - HAL1 LINE L1 -778 1729 1128 1655 148 36 30 chr5 89311009 89311312 -113774220 + AluJb SINE Alu 1 305 -7 878 293 85 102 chr5 89311312 89311510 -113774022 - HAL1 LINE L1 -1379 1128 928 2180 142 22 17 chr5 89311510 89311870 -113773662 - THE1B LTR MaLR -2 362 1 11531 93 8 4 chr5 89311870 89313445 -113772087 - THE1B-int LTR MaLR 0 1580 1 2273 126 19 25 chr5 89313445 89313811 -113771721 - THE1B LTR MaLR 0 364 1 878 293 85 102 chr5 89313811 89313906 -113771626 - HAL1 LINE L1 -1576 931 855 389 291 156 0 chr5 89314109 89314353 -113771179 - L1ME4a LINE L1 -289 6112 5831 300 283 131 35 chr5 89314497 89314695 -113770837 - L1ME4a LINE L1 -771 5655 5439 1897 167 3 3 chr5 89315103 89315409 -113770123 + AluJb SINE Alu 1 306 -6 285 274 9 53 chr5 89316190 89316249 -113769283 - MER103 DNA DNA -4 162 109 1990 145 3 10 chr5 89316249 89316546 -113768986 + AluSq SINE Alu 1 295 -18 285 274 9 53 chr5 89316546 89316599 -113768933 - MER103 DNA DNA -57 109 55 846 154 56 19 chr5 89317424 89317638 -113767894 - L1MA7 LINE L1 -2 6289 6068 258 105 0 0 chr5 89318895 89318933 -113766599 + (TCC)n Simple_repeat Simple_repeat 2 39 0 1921 164 10 6 chr5 89318933 89319244 -113766288 - AluJb SINE Alu 0 312 1 2831 50 19 0 chr5 89319415 89319774 -113765758 + L1PA4 LINE L1 5790 6155 0 10639 189 55 42 chr5 89319780 89321091 -113764441 - L1MCa LINE L1 -1807 4619 3326 2055 133 0 22 chr5 89321091 89321408 -113764124 - AluJo SINE Alu -2 310 1 10639 189 55 42 chr5 89321408 89322195 -113763337 - L1MCa LINE L1 -3100 3326 2551 2068 128 0 17 chr5 89322195 89322485 -113763047 - AluSx SINE Alu -27 285 1 10639 189 55 42 chr5 89322485 89322815 -113762717 - L1MCa LINE L1 -3875 2551 2227 670 215 0 0 chr5 89322815 89322936 -113762596 - FLAM_A SINE Alu -12 121 1 10639 189 55 42 chr5 89322936 89325047 -113760485 - L1MCa LINE L1 -4199 2227 23 1406 221 161 84 chr5 89325523 89325535 -113759997 + L1MC4 LINE L1 7044 7054 -988 1944 152 10 17 chr5 89325535 89325832 -113759700 + AluJo SINE Alu 1 295 -17 1406 221 161 84 chr5 89325832 89326249 -113759283 + L1MC4 LINE L1 7054 7438 -604 5521 57 25 25 chr5 89326249 89326448 -113759084 - MER4E LTR ERV1 0 766 568 2247 78 41 3 chr5 89326448 89326741 -113758791 + AluY SINE Alu 1 304 -7 5521 57 25 25 chr5 89326741 89327307 -113758225 - MER4E LTR ERV1 -197 569 1 1406 221 161 84 chr5 89327307 89327802 -113757730 + L1MC4 LINE L1 7438 8040 -2 21 71 0 0 chr5 89327813 89327855 -113757677 + AT_rich Low_complexity Low_complexity 1 42 0 378 282 73 0 chr5 89328454 89328578 -113756954 - MIR3 SINE MIR -75 133 1 1808 176 7 0 chr5 89329203 89329498 -113756034 - AluJb SINE Alu -15 297 1 819 278 111 37 chr5 89329501 89330180 -113755352 - HAL1 LINE L1 0 2507 1779 412 269 90 55 chr5 89330359 89330671 -113754861 - MLT1L LTR MaLR -239 376 54 1529 180 25 0 chr5 89330754 89331077 -113754455 - L1PA13 LINE L1 -758 5388 5058 * 5112 102 12 0 chr5 89331076 89331842 -113753690 + L1PA13 LINE L1 5389 6163 0 411 216 21 0 chr5 89331870 89331967 -113753565 - HAL1 LINE L1 -896 1611 1513 262 273 143 0 chr5 89332123 89332200 -113753332 + MIR SINE MIR 28 115 -93 24 32 0 0 chr5 89332770 89332801 -113752731 + AT_rich Low_complexity Low_complexity 1 31 0 465 103 0 0 chr5 89332834 89332902 -113752630 + (TA)n Simple_repeat Simple_repeat 1 68 0 189 0 0 0 chr5 89332902 89332923 -113752609 + (CA)n Simple_repeat Simple_repeat 1 21 0 2502 89 0 0 chr5 89332951 89333254 -113752278 + AluSp SINE Alu 1 303 -10 201 213 0 0 chr5 89333316 89333363 -113752169 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 458 267 61 3 chr5 89334146 89334324 -113751208 - LTR16A LTR ERVL -5 445 196 1181 197 48 135 chr5 89334361 89334947 -113750585 - MLT1F1 LTR MaLR -19 548 1 499 313 12 6 chr5 89334947 89335113 -113750419 - LTR16A LTR ERVL -259 191 25 1786 173 13 10 chr5 89335247 89335548 -113749984 + AluJb SINE Alu 1 302 -10 1987 158 3 7 chr5 89335585 89335888 -113749644 + AluJo SINE Alu 3 304 -8 606 273 119 0 chr5 89338163 89338339 -113747193 - MIR SINE MIR -32 230 34 2255 89 0 77 chr5 89339380 89339717 -113745815 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr5 89341618 89341660 -113743872 + AT_rich Low_complexity Low_complexity 1 42 0 2174 118 3 13 chr5 89341660 89341975 -113743557 + AluSx SINE Alu 1 312 0 2132 174 56 16 chr5 89342089 89342573 -113742959 - L1MB8 LINE L1 -2 6176 5674 328 169 15 31 chr5 89342576 89342641 -113742891 + MER5B DNA MER1_type 114 177 -1 280 274 42 21 chr5 89342680 89342775 -113742757 + L2 LINE L2 3208 3304 -9 470 220 51 0 chr5 89343277 89343395 -113742137 - MER94 DNA DNA -8 126 3 343 274 20 29 chr5 89343969 89344071 -113741461 + MER5A DNA MER1_type 37 137 -52 5563 167 61 2 chr5 89344243 89345530 -113740002 - L1MC1 LINE L1 0 6333 4964 383 132 15 0 chr5 89345543 89345611 -113739921 - L1MC1 LINE L1 0 6333 6265 487 216 59 0 chr5 89346103 89346205 -113739327 + FLAM_C SINE Alu 1 108 -35 2580 96 28 19 chr5 89346507 89346933 -113738599 - L1PA13 LINE L1 0 6163 5734 306 0 0 0 chr5 89348036 89348070 -113737462 + (TG)n Simple_repeat Simple_repeat 2 35 0 375 253 89 79 chr5 89348459 89348649 -113736883 - LTR67 LTR ERVL -13 544 353 929 228 49 0 chr5 89349153 89349337 -113736195 + MER58A DNA MER1_type 1 193 -31 1479 171 21 25 chr5 89349396 89349708 -113735824 - AluJb SINE Alu 0 313 3 356 285 49 26 chr5 89349821 89350057 -113735475 - L1 LINE L1 -3634 2512 2261 216 86 0 0 chr5 89350057 89350092 -113735440 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 356 285 49 26 chr5 89350092 89350141 -113735391 - L1 LINE L1 -3885 2261 2215 198 0 0 0 chr5 89350153 89350175 -113735357 + (T)n Simple_repeat Simple_repeat 1 22 0 2155 138 3 3 chr5 89350245 89350557 -113734975 - AluSx SINE Alu 0 312 1 1498 136 3 117 chr5 89350718 89350761 -113734771 + AluJb SINE Alu 3 49 -263 315 0 0 0 chr5 89350761 89350796 -113734736 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2052 133 4 0 chr5 89350799 89351078 -113734454 - AluSx SINE Alu -32 280 1 1498 136 3 117 chr5 89351078 89351339 -113734193 + AluJb SINE Alu 51 276 -36 249 83 0 0 chr5 89351342 89351378 -113734154 + (TG)n Simple_repeat Simple_repeat 2 37 0 900 309 89 16 chr5 89351534 89352093 -113733439 - HAL1b LINE L1 -567 781 182 1698 173 35 0 chr5 89352113 89352402 -113733130 + AluJb SINE Alu 1 299 -13 1648 195 38 0 chr5 89352600 89352892 -113732640 - AluJb SINE Alu -9 303 1 21 0 0 0 chr5 89352934 89352955 -113732577 + AT_rich Low_complexity Low_complexity 1 21 0 2626 55 0 3 chr5 89353215 89353526 -113732006 - AluY SINE Alu -1 310 1 1205 235 140 55 chr5 89353945 89354432 -113731100 - MER51C LTR ERV1 0 640 1 1535 299 24 32 chr5 89354432 89355462 -113730070 - HUERS-P3 LTR ERV1 0 8186 7382 311 196 56 47 chr5 89356117 89356224 -113729308 - HUERS-P3 LTR ERV1 -1623 6776 6669 1366 306 63 28 chr5 89356427 89357142 -113728390 - HUERS-P3 LTR ERV1 -1570 6186 5447 2160 146 42 16 chr5 89357183 89357561 -113727971 + MER61D LTR ERV1 114 501 0 2057 124 10 13 chr5 89357809 89358115 -113727417 + AluSx SINE Alu 1 305 -7 806 315 46 53 chr5 89358314 89359172 -113726360 - HUERS-P3 LTR ERV1 -2807 4949 3532 678 300 38 84 chr5 89359289 89359394 -113726138 - HUERS-P3 LTR ERV1 -1589 3897 3789 2321 112 0 3 chr5 89359394 89359708 -113725824 - AluSp SINE Alu 0 313 1 678 300 38 84 chr5 89359708 89359945 -113725587 - HUERS-P3 LTR ERV1 -1697 3789 3543 2196 94 0 17 chr5 89359945 89360273 -113725259 + AluY SINE Alu 1 323 0 678 300 38 84 chr5 89360273 89360530 -113725002 - HUERS-P3 LTR ERV1 -1943 3543 2796 2347 116 0 0 chr5 89360903 89361213 -113724319 + AluSg SINE Alu 1 310 0 540 322 37 19 chr5 89361592 89361915 -113723617 - HUERS-P3 LTR ERV1 -4006 2670 2342 301 300 38 25 chr5 89362138 89362298 -113723234 - HUERS-P3 LTR ERV1 -5900 1856 1695 621 279 33 43 chr5 89362564 89363150 -113722382 - HUERS-P3 LTR ERV1 -3873 1007 587 1277 218 58 101 chr5 89363701 89363819 -113721713 - MER51C LTR ERV1 0 640 519 2258 87 4 0 chr5 89363819 89364133 -113721399 - AluSc SINE Alu 0 315 1 1277 218 58 101 chr5 89364133 89364569 -113720963 - MER51C LTR ERV1 -121 519 1 6175 131 47 33 chr5 89365418 89366474 -113719058 - MER11C LTR ERVK 0 1071 1 1628 157 39 18 chr5 89366738 89367024 -113718508 + AluJb SINE Alu 1 292 -20 396 274 97 68 chr5 89367036 89367357 -113718175 + L1ME1 LINE L1 1 330 -6210 320 248 94 17 chr5 89367716 89367833 -113717699 + L1ME1 LINE L1 782 907 -5623 630 263 67 79 chr5 89367907 89368223 -113717309 + L1ME1 LINE L1 906 1217 -5326 808 168 0 8 chr5 89368239 89368359 -113717173 + AluJb SINE Alu 168 287 -21 192 77 0 0 chr5 89368359 89368385 -113717147 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1085 137 23 6 chr5 89368602 89368777 -113716755 + L1MB2 LINE L1 5990 6167 -4 2415 237 82 61 chr5 89368853 89369331 -113716201 + L1ME1 LINE L1 1276 1743 -4797 1803 149 23 36 chr5 89369331 89369639 -113715893 + AluJb SINE Alu 1 304 -8 2415 237 82 61 chr5 89369639 89370228 -113715304 + L1ME1 LINE L1 1743 2318 -4222 2211 110 10 0 chr5 89370228 89370527 -113715005 + AluSc SINE Alu 1 302 -7 2415 237 82 61 chr5 89370527 89370602 -113714930 + L1ME1 LINE L1 2318 2390 -4150 1609 184 13 17 chr5 89370602 89370901 -113714631 + AluJb SINE Alu 1 298 -14 2415 237 82 61 chr5 89370901 89371150 -113714382 + L1ME1 LINE L1 2390 2632 -3908 1691 129 77 0 chr5 89371150 89371422 -113714110 + AluSx SINE Alu 1 293 -19 2415 237 82 61 chr5 89371422 89371742 -113713790 + L1ME1 LINE L1 2632 3017 -3523 2527 219 87 36 chr5 89371768 89372107 -113713425 + L1ME1 LINE L1 3952 4272 -2268 1766 168 17 3 chr5 89372107 89372405 -113713127 - AluJb SINE Alu -10 302 1 2527 219 87 36 chr5 89372405 89372505 -113713027 + L1ME1 LINE L1 4272 4365 -2175 2385 97 3 0 chr5 89372505 89372805 -113712727 - AluSp SINE Alu -12 301 1 2527 219 87 36 chr5 89372805 89373122 -113712410 + L1ME1 LINE L1 4365 4748 -1792 419 322 17 0 chr5 89373662 89373836 -113711696 - L1MC4 LINE L1 -157 7885 7709 2861 221 111 30 chr5 89373850 89374302 -113711230 + L1ME1 LINE L1 4767 5181 -1379 185 0 40 0 chr5 89374302 89374327 -113711205 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1664 152 3 40 chr5 89374329 89374486 -113711046 - AluJo SINE Alu -26 286 144 1939 162 0 3 chr5 89374486 89374783 -113710749 - AluSx SINE Alu -16 296 1 1664 152 3 40 chr5 89374783 89374922 -113710610 - AluJo SINE Alu -168 144 1 2861 221 111 30 chr5 89374922 89375847 -113709685 + L1ME1 LINE L1 5181 6305 -255 2085 119 3 32 chr5 89375847 89376159 -113709373 - AluSx SINE Alu -9 303 1 2861 221 111 30 chr5 89376159 89376418 -113709114 + L1ME1 LINE L1 6305 6542 -18 21 0 0 0 chr5 89376424 89376445 -113709087 + AT_rich Low_complexity Low_complexity 1 21 0 1624 189 0 14 chr5 89376499 89376810 -113708722 + AluJo SINE Alu 1 307 0 2237 129 43 0 chr5 89376829 89377179 -113708353 + L1MB3 LINE L1 5812 6176 -7 268 29 0 0 chr5 89378062 89378096 -113707436 - AluSp SINE Alu -165 138 105 1180 93 0 0 chr5 89378097 89378247 -113707285 + AluSg/x SINE Alu 156 305 -7 765 310 110 4 chr5 89378448 89378703 -113706829 + MLT1I LTR MaLR 128 409 0 735 278 127 39 chr5 89378895 89379327 -113706205 + MLT1L LTR MaLR 144 613 -2 183 42 0 0 chr5 89381421 89381445 -113704087 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1693 156 0 31 chr5 89381448 89381737 -113703795 - AluJo SINE Alu -32 280 1 855 197 26 61 chr5 89382824 89383052 -113702480 + MIR SINE MIR 8 227 -35 189 250 19 0 chr5 89384077 89384129 -113701403 - L3 LINE CR1 -918 659 607 319 243 47 37 chr5 89384431 89384538 -113700994 - L2 LINE L2 -8 3305 3198 1007 169 6 22 chr5 89384585 89384763 -113700769 + L1PA15 LINE L1 5983 6157 -8 871 269 43 8 chr5 89384779 89385032 -113700500 - MIR SINE MIR 0 262 1 5378 215 31 32 chr5 89385545 89385859 -113699673 + L1M4 LINE L1 3722 4035 -2111 1807 156 30 7 chr5 89385859 89386154 -113699378 - AluJo SINE Alu -10 302 1 5378 215 31 32 chr5 89386154 89386478 -113699054 + L1M4 LINE L1 4035 4358 -1788 1620 169 52 0 chr5 89386478 89386745 -113698787 - AluJo SINE Alu -20 292 12 5378 215 31 32 chr5 89386745 89387514 -113698018 + L1M4 LINE L1 4358 5129 -1017 1519 154 48 24 chr5 89387550 89387879 -113697653 - L1M3 LINE L1 -613 5567 5232 451 285 7 53 chr5 89387898 89388049 -113697483 + MER77 LTR ERV1 66 209 -396 262 222 71 61 chr5 89388189 89388288 -113697244 - L3b LINE CR1 -281 1302 1203 1543 134 156 0 chr5 89388520 89388595 -113696937 + MER44D DNA MER2_type 1 63 -2428 342 0 0 0 chr5 89388595 89388633 -113696899 + (GA)n Simple_repeat Simple_repeat 1 38 0 1543 134 156 0 chr5 89388633 89388832 -113696700 + MER44D DNA MER2_type 63 588 -21 186 322 0 0 chr5 89389744 89389803 -113695729 + MIR SINE MIR 83 141 -67 375 236 181 16 chr5 89391168 89391295 -113694237 + MIR SINE MIR 113 260 -2 198 316 135 23 chr5 89391507 89391640 -113693892 - MIR SINE MIR -69 193 46 233 363 15 59 chr5 89391757 89391892 -113693640 - L2 LINE L2 -6 3266 3138 2220 99 3 3 chr5 89392523 89392815 -113692717 - AluSx SINE Alu -17 295 4 1481 154 109 0 chr5 89392859 89393125 -113692407 + AluJb SINE Alu 1 295 -17 27 0 0 0 chr5 89393376 89393403 -113692129 + AT_rich Low_complexity Low_complexity 1 27 0 1520 197 38 67 chr5 89393618 89393989 -113691543 - MLT1A1 LTR MaLR 0 365 6 2435 88 0 3 chr5 89394865 89395172 -113690360 + AluSg SINE Alu 1 306 -4 188 292 112 34 chr5 89395276 89395365 -113690167 - MIR SINE MIR -27 235 140 209 338 59 0 chr5 89395460 89395528 -113690004 - MIR SINE MIR -164 98 27 865 250 12 0 chr5 89395953 89396125 -113689407 - FAM SINE Alu -1 174 1 21 0 0 0 chr5 89396804 89396825 -113688707 + AT_rich Low_complexity Low_complexity 1 21 0 2121 112 0 3 chr5 89396894 89397197 -113688335 + AluSq SINE Alu 1 302 -11 250 277 77 0 chr5 89397594 89397659 -113687873 - MIR SINE MIR -154 108 39 2152 107 21 0 chr5 89398088 89398378 -113687154 + AluSq SINE Alu 1 296 -17 1725 251 22 51 chr5 89398531 89399034 -113686498 - L1ME3A LINE L1 -5 6165 5668 263 364 76 0 chr5 89399038 89399156 -113686376 + LTR67 LTR ERVL 67 193 -364 286 349 9 0 chr5 89399391 89399500 -113686032 - L2 LINE L2 -185 3087 2978 2223 102 3 0 chr5 89399523 89399841 -113685691 + AluSx SINE Alu 1 319 0 702 251 251 16 chr5 89400121 89400544 -113684988 + LTR33A LTR ERVL 2 523 0 2020 137 60 35 chr5 89401460 89401826 -113683706 + THE1C LTR MaLR 1 375 0 341 291 13 0 chr5 89401886 89401965 -113683567 + MER81 DNA DNA 34 113 -1 427 318 16 8 chr5 89402330 89402456 -113683076 + MER5B DNA MER1_type 1 127 -51 1990 92 18 28 chr5 89402489 89402772 -113682760 + AluSx SINE Alu 1 280 -32 255 204 0 0 chr5 89402795 89402839 -113682693 - MER5B DNA MER1_type -134 44 1 845 156 0 30 chr5 89402902 89403037 -113682495 - FLAM_C SINE Alu -2 131 1 2271 114 0 0 chr5 89403631 89403937 -113681595 - AluSx SINE Alu -1 311 6 1365 77 6 0 chr5 89403950 89404119 -113681413 - AluSg/x SINE Alu -9 303 134 2112 109 10 10 chr5 89404119 89404422 -113681110 - AluSg SINE Alu -7 303 1 1562 186 9 46 chr5 89404782 89405105 -113680427 + AluJo SINE Alu 1 311 -1 2503 261 73 33 chr5 89405105 89406099 -113679433 + L1ME1 LINE L1 65 1098 -5298 416 240 105 50 chr5 89406090 89406290 -113679242 + L1ME1 LINE L1 3849 4059 -2156 * 189 196 0 0 chr5 89406290 89406336 -113679196 + T-rich Low_complexity Low_complexity 1 46 0 5402 25 0 8 chr5 89406388 89406984 -113678548 - SVA Other Other 0 1386 796 2785 208 47 138 chr5 89406989 89407607 -113677925 + L1ME1 LINE L1 4049 4722 -1493 611 206 32 32 chr5 89407607 89407767 -113677765 - FLAM_A SINE Alu 0 133 1 2785 208 47 138 chr5 89407767 89408007 -113677525 + L1ME1 LINE L1 4722 4768 -1447 1912 120 4 11 chr5 89408007 89408281 -113677251 + AluSx SINE Alu 40 311 -1 2785 208 47 138 chr5 89408281 89408631 -113676901 + L1ME1 LINE L1 4768 5148 -1067 1125 177 31 65 chr5 89408628 89408922 -113676610 + L1ME1 LINE L1 5785 6068 -167 * 7144 74 20 19 chr5 89408935 89410632 -113674900 - L1PA10 LINE L1 -1 6167 4459 610 223 7 0 chr5 89410649 89410797 -113674735 + L1MA10 LINE L1 6169 6317 -17 422 300 26 37 chr5 89410846 89411036 -113674496 - MLT1J2 LTR MaLR 0 450 263 350 242 40 51 chr5 89411731 89411853 -113673679 + MIR SINE MIR 34 158 -59 263 211 13 66 chr5 89412000 89412076 -113673456 + MIR SINE MIR 140 211 -51 1998 144 0 13 chr5 89413381 89413687 -113671845 + AluJb SINE Alu 1 302 -10 460 288 94 16 chr5 89413705 89413896 -113671636 - MIR SINE MIR -12 250 45 593 251 36 12 chr5 89413953 89414120 -113671412 + MIR SINE MIR 20 190 -72 475 323 6 37 chr5 89414475 89414636 -113670896 - MIR SINE MIR -86 176 21 227 261 102 57 chr5 89414717 89414805 -113670727 - MLT1K LTR MaLR -314 274 183 5498 55 3 0 chr5 89415141 89415776 -113669756 + L1PA6 LINE L1 5516 6152 -2 475 222 31 62 chr5 89415910 89416072 -113669460 - LTR16A LTR ERVL -197 253 97 2061 112 45 0 chr5 89416374 89416661 -113668871 + AluSg SINE Alu 1 300 -10 297 204 21 97 chr5 89416700 89416793 -113668739 - L2 LINE L2 -3 3310 3225 2550 262 118 20 chr5 89416887 89417831 -113667701 - L2 LINE L2 -537 2777 1742 238 213 48 213 chr5 89418318 89418548 -113666984 + MER91 DNA MER1_type 5 190 0 4364 82 28 0 chr5 89419060 89419599 -113665933 - MER41A LTR ERV1 0 554 1 309 208 0 0 chr5 89419871 89419943 -113665589 + CT-rich Low_complexity Low_complexity 4 75 0 1568 169 59 10 chr5 89420617 89420907 -113664625 + AluJo SINE Alu 1 304 -8 507 148 0 0 chr5 89420907 89420995 -113664537 + (GA)n Simple_repeat Simple_repeat 1 88 0 417 266 4 11 chr5 89422551 89422828 -113662704 + (TG)n Simple_repeat Simple_repeat 1 274 0 246 254 12 6 chr5 89422982 89423147 -113662385 + (TG)n Simple_repeat Simple_repeat 1 166 0 22 0 0 0 chr5 89423255 89423277 -113662255 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 89423487 89423523 -113662009 + GC_rich Low_complexity Low_complexity 1 36 0 324 48 0 0 chr5 89429141 89429183 -113656349 + (TG)n Simple_repeat Simple_repeat 1 42 0 189 0 0 0 chr5 89429726 89429747 -113655785 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2056 95 4 0 chr5 89430168 89430430 -113655102 + AluSp SINE Alu 1 263 -50 29 0 0 0 chr5 89430466 89430495 -113655037 + AT_rich Low_complexity Low_complexity 1 29 0 549 302 104 0 chr5 89431007 89431199 -113654333 + MIR SINE MIR 32 243 -19 335 287 44 44 chr5 89431301 89431482 -113654050 - L1MC5 LINE L1 -49 7912 7732 1770 166 3 3 chr5 89431761 89432045 -113653487 - AluJo SINE Alu -28 284 1 2233 107 0 16 chr5 89432185 89432495 -113653037 - AluSg SINE Alu -5 305 1 2622 48 0 10 chr5 89432502 89432812 -113652720 - AluY SINE Alu -4 307 1 2543 66 7 0 chr5 89432878 89433183 -113652349 - AluSp SINE Alu -2 311 5 26 50 0 0 chr5 89434067 89434107 -113651425 + AT_rich Low_complexity Low_complexity 1 40 0 2933 221 76 46 chr5 89434141 89434467 -113651065 - L1ME3A LINE L1 -7 6163 5848 1456 156 98 48 chr5 89434467 89434631 -113650901 - AluJb SINE Alu -2 310 156 1952 133 7 23 chr5 89434631 89434932 -113650600 - AluJb SINE Alu -12 300 5 1456 156 98 48 chr5 89434932 89434945 -113650587 - AluJb SINE Alu -156 156 145 252 77 0 0 chr5 89434945 89434984 -113650548 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1456 156 98 48 chr5 89434984 89435100 -113650432 - AluJb SINE Alu -167 145 1 2933 221 76 46 chr5 89435100 89435551 -113649981 - L1ME3A LINE L1 -322 5848 5412 2192 124 0 0 chr5 89435551 89435841 -113649691 - AluSx SINE Alu -17 295 6 2933 221 76 46 chr5 89435841 89435926 -113649606 - L1ME3A LINE L1 -758 5412 5331 333 205 26 0 chr5 89435926 89436004 -113649528 - MER116 DNA Mariner 0 80 1 2933 221 76 46 chr5 89436004 89436147 -113649385 - L1ME3A LINE L1 -839 5331 5120 1387 242 27 64 chr5 89436177 89436925 -113648607 - HERVL40 LTR ERVL -595 4660 1769 1309 216 67 0 chr5 89436928 89437183 -113648349 - HERVL40 LTR ERVL -1731 3799 3528 894 231 5 16 chr5 89437203 89437389 -113648143 - HERVL40 LTR ERVL -2131 3399 3216 1704 225 54 29 chr5 89437450 89437859 -113647673 - HERVL40 LTR ERVL -2417 3113 2695 2300 76 38 0 chr5 89438919 89439208 -113646324 - AluSp SINE Alu -13 300 1 349 328 130 0 chr5 89439286 89439463 -113646069 - MIR SINE MIR -2 260 61 206 305 191 0 chr5 89440328 89440459 -113645073 + MIR SINE MIR 34 189 -73 2024 119 22 0 chr5 89440515 89440822 -113644710 - AluSq SINE Alu 0 313 1 28 29 0 0 chr5 89441165 89441200 -113644332 + AT_rich Low_complexity Low_complexity 1 35 0 808 218 87 94 chr5 89441379 89441566 -113643966 - L1ME4a LINE L1 -4 6117 5930 2225 115 0 13 chr5 89441566 89441871 -113643661 + AluSq SINE Alu 1 301 -12 808 218 87 94 chr5 89441871 89442110 -113643422 - L1ME4a LINE L1 -191 5930 5694 2206 134 0 6 chr5 89443424 89443737 -113641795 + AluSx SINE Alu 1 311 -1 273 151 0 0 chr5 89444570 89444623 -113640909 + (TG)n Simple_repeat Simple_repeat 2 54 0 1744 142 4 0 chr5 89444643 89444896 -113640636 - AluSx SINE Alu -23 289 36 2406 57 0 0 chr5 89445646 89445977 -113639555 - AluY SINE Alu 0 331 1 704 144 0 0 chr5 89446608 89446712 -113638820 + MER58 DNA MER1_type 2317 2420 0 1597 139 30 51 chr5 89446720 89447051 -113638481 + MER33 DNA MER1_type 1 324 0 1940 148 26 0 chr5 89447126 89447430 -113638102 - AluSx SINE Alu 0 312 1 467 291 16 28 chr5 89447717 89447899 -113637633 + L1ME LINE L1 5616 5795 -326 1807 159 0 7 chr5 89448011 89448323 -113637209 + AluJb SINE Alu 7 316 0 249 33 0 0 chr5 89449002 89449032 -113636500 + (TG)n Simple_repeat Simple_repeat 2 31 0 228 363 141 22 chr5 89449463 89449598 -113635934 + L2 LINE L2 3121 3271 -1 205 330 86 30 chr5 89450015 89450212 -113635320 + L2 LINE L2 2854 3061 -211 226 143 0 0 chr5 89450336 89450371 -113635161 - MIR SINE MIR -12 250 216 366 23 0 0 chr5 89451078 89451121 -113634411 + (TG)n Simple_repeat Simple_repeat 2 44 0 1902 160 0 0 chr5 89451125 89451419 -113634113 - AluJb SINE Alu -18 294 1 266 248 230 0 chr5 89451653 89451766 -113633766 + MIR SINE MIR 36 174 -88 201 300 33 17 chr5 89451828 89451888 -113633644 + MIR SINE MIR 201 261 -1 2147 104 24 0 chr5 89452051 89452339 -113633193 - AluSx SINE Alu -17 295 1 230 216 261 36 chr5 89454171 89454229 -113631303 - MER5A DNA MER1_type -7 182 138 1220 172 125 65 chr5 89454229 89454508 -113631024 + AluJb SINE Alu 1 296 -6 230 216 261 36 chr5 89454508 89454560 -113630972 - MER5A DNA MER1_type -51 138 47 183 129 0 0 chr5 89455236 89455267 -113630265 + (CA)n Simple_repeat Simple_repeat 2 32 0 1070 298 150 2 chr5 89456583 89457036 -113628496 - LTR33 LTR ERVL 0 521 2 2186 53 0 4 chr5 89457191 89457453 -113628079 + AluY SINE Alu 40 300 -11 826 249 56 44 chr5 89457899 89458044 -113627488 - L1ME1 LINE L1 -4 6162 6011 2446 77 0 0 chr5 89458044 89458343 -113627189 + AluY SINE Alu 1 299 -12 826 249 56 44 chr5 89458343 89458446 -113627086 - L1ME1 LINE L1 -155 6011 5911 207 0 0 0 chr5 89458449 89458472 -113627060 + (TA)n Simple_repeat Simple_repeat 1 23 0 311 282 126 75 chr5 89458554 89458763 -113626769 - HAL1 LINE L1 -4 2503 2269 2142 123 0 0 chr5 89458763 89459063 -113626469 - AluSx SINE Alu -12 300 1 311 282 126 75 chr5 89459063 89459186 -113626346 - HAL1 LINE L1 -238 2269 2154 729 129 0 0 chr5 89459543 89459659 -113625873 + (TCC)n Simple_repeat Simple_repeat 2 117 0 1860 109 0 43 chr5 89459659 89459935 -113625597 - AluSx SINE Alu -13 299 36 2571 50 0 0 chr5 89460759 89461058 -113624474 + AluY SINE Alu 2 300 -11 512 315 169 25 chr5 89461753 89462198 -113623334 + LTR33 LTR ERVL 13 521 0 1746 154 39 16 chr5 89462397 89462578 -113622954 - AluJo SINE Alu 0 312 120 206 0 69 0 chr5 89462578 89462607 -113622925 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1746 154 39 16 chr5 89462607 89462730 -113622802 - AluJo SINE Alu -192 120 1 750 180 17 159 chr5 89462936 89463225 -113622307 - MLT1G LTR MaLR -21 569 322 258 246 31 0 chr5 89463232 89463297 -113622235 + MLT1H1 LTR MaLR 206 272 -283 2059 111 0 4 chr5 89463332 89463602 -113621930 - AluSq SINE Alu -33 280 12 193 284 61 81 chr5 89464794 89464942 -113620590 + L2 LINE L2 3161 3305 -8 1877 137 7 37 chr5 89466131 89466289 -113619243 - AluSx SINE Alu -22 290 144 2583 50 0 3 chr5 89466289 89466592 -113618940 - AluY SINE Alu -8 303 2 1877 137 7 37 chr5 89466592 89466732 -113618800 - AluSx SINE Alu -168 144 1 2196 184 22 26 chr5 89468005 89468222 -113617310 - L1MB7 LINE L1 -100 6084 5868 2753 104 8 8 chr5 89468222 89468597 -113616935 - THE1C LTR MaLR 0 375 1 2196 184 22 26 chr5 89468597 89468835 -113616697 - L1MB7 LINE L1 -316 5868 5631 364 279 133 19 chr5 89468921 89469079 -113616453 + MIR3 SINE MIR 19 194 -14 33 66 0 0 chr5 89469152 89469213 -113616319 + AT_rich Low_complexity Low_complexity 1 61 0 1959 214 89 70 chr5 89469679 89470311 -113615221 + LTR48B LTR ERV1 1 644 0 2469 90 0 0 chr5 89471210 89471521 -113614011 - AluSx SINE Alu -1 311 1 242 196 0 22 chr5 89471735 89471781 -113613751 + polypyrimidine Low_complexity Low_complexity 4 48 0 347 289 125 0 chr5 89472193 89472321 -113613211 + MIR SINE MIR 108 251 -11 435 263 71 54 chr5 89472703 89472947 -113612585 + L1ME4a LINE L1 5712 5965 -156 2201 113 10 0 chr5 89472947 89473248 -113612284 + AluSg SINE Alu 1 304 -6 435 263 71 54 chr5 89473248 89473357 -113612175 + L1ME4a LINE L1 5965 6071 -50 249 94 38 75 chr5 89474193 89474246 -113611286 - L1ME4a LINE L1 -103 6018 5968 339 281 78 24 chr5 89474322 89474489 -113611043 - L1MC4a LINE L1 -1959 5849 5674 2433 93 3 0 chr5 89474530 89474842 -113610690 + AluSp SINE Alu 1 313 0 504 209 33 33 chr5 89475148 89475301 -113610231 - L1MC4 LINE L1 0 8042 7890 349 258 21 0 chr5 89475297 89475394 -113610138 - L1MC4 LINE L1 -663 7379 7281 * 491 223 74 0 chr5 89475389 89475510 -113610022 - L1ME1 LINE L1 -310 5856 5727 485 292 28 0 chr5 89475605 89475749 -113609783 + LTR16A LTR ERVL 98 245 -205 444 288 31 0 chr5 89475933 89476096 -113609436 + HERVL LTR ERVL 3777 3944 -1710 968 269 43 69 chr5 89476152 89476617 -113608915 - L1ME LINE L1 -5477 593 141 248 125 68 11 chr5 89476666 89476754 -113608778 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 312 289 97 26 chr5 89476823 89477115 -113608417 - L1ME1 LINE L1 -719 5432 5286 2446 115 48 25 chr5 89477309 89477665 -113607867 - THE1B LTR MaLR 0 364 1 490 236 116 45 chr5 89477787 89477986 -113607546 - L1ME4a LINE L1 -281 5840 5628 867 218 6 0 chr5 89477987 89478143 -113607389 - AluJb SINE Alu -9 303 147 1408 63 1 1 chr5 89478260 89478450 -113607082 - L1P5 LINE L1 -421 5730 5542 25 51 0 0 chr5 89478460 89478499 -113607033 + AT_rich Low_complexity Low_complexity 1 39 0 239 211 22 67 chr5 89478653 89478743 -113606789 - L1ME4a LINE L1 -813 5333 5248 300 360 27 13 chr5 89479488 89479638 -113605894 - L3 LINE CR1 -367 1210 1059 2142 114 6 35 chr5 89480891 89481207 -113604325 + AluSx SINE Alu 6 312 0 2131 111 10 3 chr5 89481873 89482170 -113603362 - AluSx SINE Alu -12 300 2 280 233 27 14 chr5 89483558 89483631 -113601901 - L2 LINE L2 -2 3311 3238 408 245 217 7 chr5 89483886 89484029 -113601503 - MIR SINE MIR -11 251 79 386 306 94 20 chr5 89484101 89484346 -113601186 - L2 LINE L2 -385 2929 2667 204 97 0 0 chr5 89484620 89484651 -113600881 + (TG)n Simple_repeat Simple_repeat 2 32 0 2063 198 33 62 chr5 89484773 89485289 -113600243 - LTR26B LTR ERV1 0 531 31 2438 97 0 0 chr5 89487319 89487630 -113597902 - AluSq SINE Alu -2 311 1 861 170 16 13 chr5 89489035 89489342 -113596190 + CT-rich Low_complexity Low_complexity 1 308 0 723 187 0 0 chr5 89490104 89490238 -113595294 - L1MB7 LINE L1 -20 6164 6031 1237 171 130 0 chr5 89490238 89490484 -113595048 + L1MC2 LINE L1 6058 6335 -9 352 226 12 0 chr5 89490497 89490581 -113594951 - L1MB7 LINE L1 -147 6037 5953 42293 64 5 2 chr5 89491781 89497251 -113588281 + L1PA5 LINE L1 3 5491 -663 7491 20 14 0 chr5 89497251 89498062 -113587470 + L1PA3 LINE L1 5313 6155 0 5687 54 18 0 chr5 89498062 89498723 -113586809 + L1PA5 LINE L1 5476 6151 -3 621 232 18 54 chr5 89498763 89498987 -113586545 + L1MEd LINE L1 978 1193 -4926 1308 255 70 91 chr5 89499237 89499992 -113585540 - HAL1 LINE L1 -115 2392 1665 2396 124 14 14 chr5 89499992 89500356 -113585176 - THE1B LTR MaLR 0 364 1 1308 255 70 91 chr5 89500356 89500638 -113584894 - HAL1 LINE L1 -842 1665 1379 743 283 82 18 chr5 89501047 89501667 -113583865 - L1ME3 LINE L1 -218 5944 5246 1866 186 0 0 chr5 89501667 89501974 -113583558 - AluJo SINE Alu -5 307 1 743 283 82 18 chr5 89501974 89502223 -113583309 - L1ME3 LINE L1 -916 5246 5014 501 302 116 28 chr5 89502377 89502711 -113582821 + L1MEd LINE L1 2213 2580 -3549 1779 163 0 39 chr5 89503092 89503399 -113582133 - AluJo SINE Alu -11 301 7 380 260 10 0 chr5 89503625 89503729 -113581803 - L1MEd LINE L1 -5735 384 280 2324 94 3 0 chr5 89504118 89504416 -113581116 + AluSg SINE Alu 1 299 -11 1350 231 67 17 chr5 89504820 89505239 -113580293 - L1ME1 LINE L1 -31 6135 5696 301 297 159 0 chr5 89505363 89505508 -113580024 + MER117 DNA MER1_type 4 171 -26 615 266 20 60 chr5 89506295 89506547 -113578985 - MIR SINE MIR 0 262 21 2125 131 0 0 chr5 89507231 89507521 -113578011 + AluSx SINE Alu 1 290 -22 503 278 67 45 chr5 89507668 89507891 -113577641 - MIR SINE MIR -34 228 1 189 0 0 0 chr5 89512256 89512277 -113573255 + (A)n Simple_repeat Simple_repeat 1 21 0 399 305 104 13 chr5 89512789 89512943 -113572589 - MIR SINE MIR -90 172 5 224 333 122 35 chr5 89512985 89513387 -113572145 + L2 LINE L2 2282 2718 -596 184 326 53 11 chr5 89513520 89513615 -113571917 - L2 LINE L2 0 3313 3215 390 303 192 30 chr5 89513974 89514245 -113571287 - L1ME1 LINE L1 -539 5582 5268 3835 150 28 8 chr5 89514398 89515103 -113570429 - L1MB7 LINE L1 0 6184 5466 25838 42 2 2 chr5 89516218 89520373 -113565159 - L1PA5 LINE L1 0 6154 2000 21 0 0 0 chr5 89520617 89520638 -113564894 + AT_rich Low_complexity Low_complexity 1 21 0 976 157 0 65 chr5 89520639 89520804 -113564728 - L1MA6 LINE L1 -1 6299 6125 1899 146 0 3 chr5 89520804 89521092 -113564440 + AluJb SINE Alu 1 287 -25 252 0 0 0 chr5 89521092 89521120 -113564412 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 976 157 0 65 chr5 89521120 89521169 -113564363 - L1MA6 LINE L1 -173 6127 6098 989 168 157 5 chr5 89521696 89521887 -113563645 + AluJb SINE Alu 86 305 -7 212 227 15 30 chr5 89521896 89521962 -113563570 + (ATTAG)n Simple_repeat Simple_repeat 4 68 0 959 284 122 50 chr5 89522069 89522188 -113563344 + L2 LINE L2 2601 2710 -603 2423 63 0 3 chr5 89522188 89522488 -113563044 + AluY SINE Alu 1 299 -12 959 284 122 50 chr5 89522488 89522611 -113562921 + L2 LINE L2 2710 2823 -490 2226 138 67 45 chr5 89522611 89522651 -113562881 - MSTA LTR MaLR 0 428 390 2284 101 7 0 chr5 89522651 89522957 -113562575 + AluSg1 SINE Alu 1 308 -1 2226 138 67 45 chr5 89522957 89523335 -113562197 - MSTA LTR MaLR -38 390 1 959 284 122 50 chr5 89523335 89523760 -113561772 + L2 LINE L2 2823 3313 0 297 207 8 83 chr5 89523877 89523998 -113561534 - L1ME4a LINE L1 -33 6088 5977 488 294 55 43 chr5 89524147 89524562 -113560970 - L1ME4a LINE L1 -241 5880 5461 1493 159 25 103 chr5 89524598 89524762 -113560770 - AluJo SINE Alu -16 296 168 1855 181 3 7 chr5 89524762 89525072 -113560460 - AluJb SINE Alu 0 312 4 1493 159 25 103 chr5 89525072 89525227 -113560305 - AluJo SINE Alu -144 168 2 236 269 42 34 chr5 89525309 89525428 -113560104 - HAL1b LINE L1 -439 909 790 232 191 43 0 chr5 89525484 89525531 -113560001 - HAL1b LINE L1 -437 911 863 359 272 39 95 chr5 89526158 89526333 -113559199 - HAL1 LINE L1 -1027 1480 1297 2033 123 31 3 chr5 89526333 89526625 -113558907 - AluSx SINE Alu -12 300 1 359 272 39 95 chr5 89526625 89527037 -113558495 - HAL1 LINE L1 -1210 1297 926 1817 234 67 47 chr5 89527050 89527631 -113557901 - MLT1E LTR MaLR 0 593 1 513 210 32 25 chr5 89527830 89528108 -113557424 + MLT1E1 LTR MaLR 57 346 -308 * 1023 232 21 165 chr5 89528081 89528318 -113557214 + MLT1E LTR MaLR 254 545 -48 4683 148 54 57 chr5 89528841 89530041 -113555491 + L1MC1 LINE L1 5140 6333 0 343 274 20 29 chr5 89530213 89530315 -113555217 - MER5A DNA MER1_type -52 137 37 5527 46 23 14 chr5 89530954 89531652 -113553880 + SVA Other Other 683 1386 0 222 192 0 0 chr5 89531704 89531756 -113553776 + A-rich Low_complexity Low_complexity 1 52 0 333 248 115 6 chr5 89531793 89531950 -113553582 - L1M4 LINE L1 -2193 3953 3780 * 2138 261 73 33 chr5 89531941 89532937 -113552595 - L1MEc LINE L1 -5298 1098 63 364 191 0 73 chr5 89532970 89533080 -113552452 - FRAM SINE Alu -25 141 40 198 256 23 0 chr5 89533856 89533899 -113551633 - L2 LINE L2 -92 3180 3137 279 355 122 0 chr5 89534385 89534492 -113551040 + L2 LINE L2 3151 3270 -2 361 290 111 25 chr5 89534912 89535074 -113550458 + MIR SINE MIR 87 262 0 575 203 80 31 chr5 89535605 89535768 -113549764 + LTR40c LTR ERVL 7 177 -288 640 188 0 30 chr5 89535837 89535970 -113549562 + LTR40a LTR ERVL 391 519 0 184 327 82 45 chr5 89536023 89536133 -113549399 + MIR3 SINE MIR 4 117 -91 545 280 104 28 chr5 89536166 89536377 -113549155 + MIR SINE MIR 36 262 0 205 368 0 0 chr5 89536463 89536531 -113549001 + MIR SINE MIR 117 184 -78 296 235 0 94 chr5 89537534 89537619 -113547913 - MER5B DNA MER1_type -7 171 95 261 0 0 0 chr5 89537623 89537652 -113547880 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4820 38 9 26 chr5 89537652 89538234 -113547298 - SVA Other Other -19 1367 796 2236 239 33 46 chr5 89538239 89538871 -113546661 + L1MB7 LINE L1 3980 4601 -1545 559 225 36 0 chr5 89538871 89539017 -113546515 - FLAM_A SINE Alu 0 150 1 2236 239 33 46 chr5 89539017 89539203 -113546329 + L1MB7 LINE L1 4601 4788 -1358 1127 136 11 17 chr5 89539257 89539433 -113546099 + AluSx SINE Alu 40 214 -98 7560 37 1 0 chr5 89539534 89541165 -113544367 + L1PA5 LINE L1 4521 6154 0 3823 150 28 8 chr5 89542280 89542985 -113542547 + L1MB7 LINE L1 5466 6184 0 390 303 192 30 chr5 89543138 89543409 -113542123 + L1ME1 LINE L1 5268 5582 -539 184 326 53 11 chr5 89543768 89543863 -113541669 + L2 LINE L2 3215 3313 0 224 333 122 35 chr5 89543996 89544398 -113541134 - L2 LINE L2 -596 2718 2282 399 305 104 13 chr5 89544440 89544594 -113540938 + MIR SINE MIR 5 172 -90 207 0 0 0 chr5 89545106 89545129 -113540403 + (T)n Simple_repeat Simple_repeat 1 23 0 503 278 67 45 chr5 89549495 89549718 -113535814 + MIR SINE MIR 1 228 -34 2125 131 0 0 chr5 89549865 89550155 -113535377 - AluSx SINE Alu -22 290 1 615 266 20 60 chr5 89550839 89551091 -113534441 + MIR SINE MIR 21 262 0 301 297 159 0 chr5 89551878 89552023 -113533509 - MER117 DNA MER1_type -26 171 4 1350 231 67 17 chr5 89552147 89552566 -113532966 + L1ME1 LINE L1 5696 6135 -31 2356 94 0 0 chr5 89552970 89553269 -113532263 - AluSg SINE Alu -11 299 1 380 260 10 0 chr5 89553658 89553762 -113531770 + L1MEd LINE L1 280 384 -5735 1779 163 0 39 chr5 89553988 89554295 -113531237 + AluJo SINE Alu 7 301 -11 515 299 116 28 chr5 89554678 89555012 -113530520 - L1MEd LINE L1 -3549 2580 2213 743 283 82 18 chr5 89555166 89555415 -113530117 + L1ME3 LINE L1 5014 5246 -916 1860 188 0 0 chr5 89555415 89555723 -113529809 + AluJo SINE Alu 1 308 -4 743 283 82 18 chr5 89555723 89556343 -113529189 + L1ME3 LINE L1 5246 5944 -218 1294 256 71 92 chr5 89556754 89557036 -113528496 + HAL1 LINE L1 1379 1666 -841 2408 124 14 14 chr5 89557036 89557400 -113528132 + THE1B LTR MaLR 1 364 0 1294 256 71 92 chr5 89557400 89558122 -113527410 + HAL1 LINE L1 1666 2361 -146 529 230 18 54 chr5 89558407 89558629 -113526903 - L1MEd LINE L1 -4928 1191 978 5300 56 18 0 chr5 89558669 89559333 -113526199 - L1PA5 LINE L1 -3 6151 5476 6705 22 13 0 chr5 89559333 89560162 -113525370 - L1PA3 LINE L1 -3 6152 5313 * 25873 42 1 2 chr5 89560142 89563636 -113521896 - L1PA5 LINE L1 -663 5491 2000 21 0 0 0 chr5 89563880 89563901 -113521631 + AT_rich Low_complexity Low_complexity 1 21 0 963 162 0 65 chr5 89563902 89564067 -113521465 - L1MA6 LINE L1 -1 6299 6125 1888 149 0 3 chr5 89564067 89564355 -113521177 + AluJb SINE Alu 1 287 -25 252 0 0 0 chr5 89564355 89564383 -113521149 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 963 162 0 65 chr5 89564383 89564432 -113521100 - L1MA6 LINE L1 -173 6127 6098 1005 166 155 5 chr5 89564962 89565155 -113520377 + AluJb SINE Alu 86 307 -5 212 227 15 30 chr5 89565164 89565230 -113520302 + (ATTAG)n Simple_repeat Simple_repeat 4 68 0 959 284 122 50 chr5 89565337 89565456 -113520076 + L2 LINE L2 2601 2710 -603 2410 67 0 3 chr5 89565456 89565756 -113519776 + AluY SINE Alu 1 299 -12 959 284 122 50 chr5 89565756 89565879 -113519653 + L2 LINE L2 2710 2823 -490 2226 138 67 45 chr5 89565879 89565919 -113519613 - MSTA LTR MaLR 0 428 390 2238 108 7 0 chr5 89565919 89566225 -113519307 + AluSg1 SINE Alu 1 308 -1 2226 138 67 45 chr5 89566225 89566603 -113518929 - MSTA LTR MaLR -38 390 1 959 284 122 50 chr5 89566603 89567028 -113518504 + L2 LINE L2 2823 3313 0 297 207 8 83 chr5 89567145 89567266 -113518266 - L1ME4a LINE L1 -33 6088 5977 488 294 55 43 chr5 89567415 89567830 -113517702 - L1ME4a LINE L1 -241 5880 5461 1493 159 25 103 chr5 89567866 89568030 -113517502 - AluJo SINE Alu -16 296 168 1855 181 3 7 chr5 89568030 89568340 -113517192 - AluJb SINE Alu 0 312 4 1493 159 25 103 chr5 89568340 89568495 -113517037 - AluJo SINE Alu -144 168 2 236 269 42 34 chr5 89568577 89568696 -113516836 - HAL1b LINE L1 -439 909 790 232 191 43 0 chr5 89568752 89568799 -113516733 - HAL1b LINE L1 -437 911 863 359 272 39 95 chr5 89569426 89569601 -113515931 - HAL1 LINE L1 -1027 1480 1297 2033 123 31 3 chr5 89569601 89569893 -113515639 - AluSx SINE Alu -12 300 1 359 272 39 95 chr5 89569893 89570305 -113515227 - HAL1 LINE L1 -1210 1297 926 1817 234 67 47 chr5 89570318 89570899 -113514633 - MLT1E LTR MaLR 0 593 1 513 210 32 25 chr5 89571098 89571376 -113514156 + MLT1E1 LTR MaLR 57 346 -308 * 1023 232 21 165 chr5 89571349 89571586 -113513946 + MLT1E LTR MaLR 254 545 -48 253 98 78 20 chr5 89571606 89571657 -113513875 - MLT1D LTR MaLR 0 505 452 627 279 58 5 chr5 89573357 89573547 -113511985 + MIR SINE MIR 2 201 -61 190 295 16 16 chr5 89577697 89577758 -113507774 + L2 LINE L2 3211 3271 -1 23 33 0 0 chr5 89577861 89577891 -113507641 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 89578320 89578342 -113507190 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 89578933 89578961 -113506571 + AT_rich Low_complexity Low_complexity 1 28 0 633 186 0 0 chr5 89579085 89579187 -113506345 - FLAM_A SINE Alu -27 115 14 190 175 0 140 chr5 89579189 89579246 -113506286 - MIR3 SINE MIR -53 155 107 230 277 15 15 chr5 89579300 89579365 -113506167 + L2 LINE L2 3207 3271 -1 2316 64 4 0 chr5 89579957 89580271 -113505261 - AluY SINE Alu 0 315 1 466 271 52 26 chr5 89580531 89580723 -113504809 - L2 LINE L2 -60 3253 3057 528 255 143 30 chr5 89580729 89581094 -113504438 - L1MC4a LINE L1 -1637 6171 5766 5621 235 87 72 chr5 89581156 89581575 -113503957 - L2 LINE L2 -337 2977 2566 1894 104 165 12 chr5 89581575 89581903 -113503629 - MER83B LTR ERV1 0 378 1 5621 235 87 72 chr5 89581903 89583925 -113501607 - L2 LINE L2 -748 2566 500 417 204 0 0 chr5 89584100 89584188 -113501344 - L2 LINE L2 -1495 1819 1732 27 29 0 0 chr5 89584398 89584432 -113501100 + AT_rich Low_complexity Low_complexity 1 34 0 2545 116 29 10 chr5 89584477 89584891 -113500641 - L1MA4 LINE L1 -14 6286 5865 258 213 62 12 chr5 89585450 89585530 -113500002 - LTR67 LTR ERVL -380 177 94 180 297 182 42 chr5 89588787 89588952 -113496580 + MIR3 SINE MIR 21 208 0 220 234 76 131 chr5 89591186 89591331 -113494201 + MIR SINE MIR 5 141 -67 733 146 0 95 chr5 89592571 89592708 -113492824 + FLAM_A SINE Alu 1 124 -9 237 279 189 47 chr5 89594486 89594676 -113490856 + L2 LINE L2 2842 3058 -214 26 0 0 0 chr5 89595557 89595583 -113489949 + AT_rich Low_complexity Low_complexity 1 26 0 204 179 0 0 chr5 89595685 89595724 -113489808 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 770 226 38 19 chr5 89595991 89596207 -113489325 + MIR SINE MIR 7 225 -37 310 251 42 65 chr5 89597420 89597574 -113487958 + MIR3 SINE MIR 56 205 -3 312 333 49 8 chr5 89598545 89598668 -113486864 - L1ME4a LINE L1 -1 6120 5993 31 0 0 0 chr5 89599117 89599148 -113486384 + AT_rich Low_complexity Low_complexity 1 31 0 240 196 216 0 chr5 89600187 89600238 -113485294 + MER58A DNA MER1_type 2 63 -161 1808 171 30 10 chr5 89600239 89600538 -113484994 - AluJo SINE Alu -5 307 3 973 163 78 0 chr5 89600559 89600725 -113484807 + MER58A DNA MER1_type 38 216 -8 356 290 71 39 chr5 89602744 89602899 -113482633 - MIR SINE MIR -54 208 49 262 286 163 31 chr5 89603193 89603291 -113482241 - L2 LINE L2 0 3272 3162 2348 103 3 0 chr5 89603785 89604096 -113481436 - AluSx SINE Alu 0 312 1 3426 250 73 33 chr5 89604171 89605489 -113480043 - L2 LINE L2 -1 3312 1936 223 352 0 11 chr5 89605826 89605917 -113479615 + MER5A DNA MER1_type 2 91 -98 233 217 14 0 chr5 89606545 89606614 -113478918 - L1M2 LINE L1 -856 5435 5366 2606 61 0 0 chr5 89606733 89607044 -113478488 - AluY SINE Alu 0 311 1 217 321 100 40 chr5 89607836 89607976 -113477556 + MER5A DNA MER1_type 19 155 -23 288 91 0 0 chr5 89608444 89608488 -113477044 + (TC)n Simple_repeat Simple_repeat 1 44 0 180 77 0 0 chr5 89608490 89608516 -113477016 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr5 89608556 89608578 -113476954 + AT_rich Low_complexity Low_complexity 1 22 0 279 292 56 62 chr5 89608799 89608994 -113476538 + L1MEd LINE L1 6 199 -5920 2261 119 0 0 chr5 89609250 89609553 -113475979 + AluSx SINE Alu 1 303 -9 272 324 27 27 chr5 89609721 89609943 -113475589 + L1MEd LINE L1 683 904 -5215 295 234 36 7 chr5 89610086 89610223 -113475309 + (TA)n Simple_repeat Simple_repeat 2 142 0 511 279 38 50 chr5 89610226 89610541 -113474991 + L1MEd LINE L1 1023 1373 -4862 319 280 95 30 chr5 89610591 89610791 -113474741 + L1ME2 LINE L1 5672 5884 -280 23 78 0 0 chr5 89611097 89611148 -113474384 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr5 89611265 89611289 -113474243 + AT_rich Low_complexity Low_complexity 1 24 0 231 286 20 0 chr5 89612792 89612841 -113472691 + L2 LINE L2 3205 3254 -18 1661 184 10 7 chr5 89613921 89614209 -113471323 + AluJo SINE Alu 1 289 -23 26 30 0 0 chr5 89615012 89615045 -113470487 + AT_rich Low_complexity Low_complexity 1 33 0 423 0 0 0 chr5 89615677 89615724 -113469808 + (TG)n Simple_repeat Simple_repeat 2 48 0 2139 93 3 33 chr5 89616216 89616516 -113469016 + AluSx SINE Alu 1 291 -21 419 267 155 32 chr5 89618358 89618609 -113466923 + L1MEd LINE L1 2910 3191 -2938 1181 141 40 5 chr5 89619117 89619316 -113466216 - MER2 DNA MER2_type -139 206 1 224 59 29 0 chr5 89619963 89619997 -113465535 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 453 189 165 98 chr5 89620005 89620169 -113465363 - MER5A DNA MER1_type -3 186 12 560 340 53 21 chr5 89621330 89621615 -113463917 + L2 LINE L2 2682 2975 -339 429 206 157 0 chr5 89621615 89621717 -113463815 + L2 LINE L2 3196 3313 0 219 296 42 14 chr5 89622577 89622648 -113462884 - L2 LINE L2 -9 3263 3191 2466 96 0 0 chr5 89622912 89623224 -113462308 - AluSx SINE Alu 0 312 1 2243 162 57 29 chr5 89623413 89623875 -113461657 - L1MB2 LINE L1 -37 6134 5663 1206 199 199 33 chr5 89624063 89624430 -113461102 - MSTC LTR MaLR 0 428 1 6858 224 91 34 chr5 89624431 89626070 -113459462 - MSTC-int LTR MaLR -1 1734 2 911 156 149 25 chr5 89626072 89626384 -113459148 - MSTD LTR MaLR 0 396 1 1914 160 0 19 chr5 89627136 89627454 -113458078 + AluJo SINE Alu 1 312 0 207 0 0 0 chr5 89627829 89627852 -113457680 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 892 213 61 0 chr5 89629810 89630007 -113455525 + MER3 DNA MER1_type 1 209 0 2052 164 14 42 chr5 89630746 89631100 -113454432 - MER2 DNA MER2_type 0 344 1 2078 135 3 0 chr5 89631731 89632028 -113453504 - AluSx SINE Alu -14 298 1 2606 148 49 62 chr5 89633195 89633763 -113451769 - L1MB7 LINE L1 0 6184 5624 1617 190 7 7 chr5 89634091 89634386 -113451146 + AluJo SINE Alu 10 304 -8 2318 125 0 0 chr5 89634483 89634795 -113450737 + AluSx SINE Alu 1 312 0 2475 162 28 13 chr5 89634795 89635264 -113450268 + L1MA7 LINE L1 5814 6289 -2 1995 121 40 0 chr5 89635696 89636000 -113449532 + AluSx SINE Alu 1 315 0 23 33 0 0 chr5 89636267 89636297 -113449235 + AT_rich Low_complexity Low_complexity 1 30 0 2042 143 0 0 chr5 89638221 89638500 -113447032 - AluSx SINE Alu -33 279 1 192 77 0 0 chr5 89638521 89638547 -113446985 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 711 277 5 27 chr5 89638890 89639110 -113446422 + L2 LINE L2 3099 3313 0 692 230 6 56 chr5 89639646 89639824 -113445708 - MER69A DNA AcHobo -8 169 1 516 210 8 32 chr5 89640783 89640907 -113444625 - MER5B DNA MER1_type -43 135 15 324 48 0 0 chr5 89640918 89640960 -113444572 + (TG)n Simple_repeat Simple_repeat 1 42 0 994 219 11 0 chr5 89641304 89641491 -113444041 + MER5A DNA MER1_type 1 189 0 3237 186 28 31 chr5 89641801 89641870 -113443662 - L1MB8 LINE L1 0 6178 6110 1766 179 10 3 chr5 89641870 89642171 -113443361 + AluJb SINE Alu 1 303 -9 3237 186 28 31 chr5 89642171 89642773 -113442759 - L1MB8 LINE L1 -68 6110 5509 233 217 150 0 chr5 89642774 89642834 -113442698 - L1MCc LINE L1 -4301 2263 2195 925 68 0 8 chr5 89642872 89642989 -113442543 - AluSg/x SINE Alu -26 286 171 2836 199 87 14 chr5 89642989 89643901 -113441631 - L1MCc LINE L1 -4518 2227 1064 2208 160 17 0 chr5 89643902 89644252 -113441280 + MER47A DNA MER2_type 11 366 0 1917 226 34 42 chr5 89644253 89644337 -113441195 - L1MCc LINE L1 -4967 1078 995 1665 181 115 0 chr5 89644337 89644685 -113440847 + MLT1B LTR MaLR 1 388 -2 1917 226 34 42 chr5 89644685 89645130 -113440402 - L1MCc LINE L1 -5050 995 553 1675 295 21 20 chr5 89645198 89645760 -113439772 - L1MCc LINE L1 -5482 563 1 1975 208 13 11 chr5 89645787 89646243 -113439289 - L1M4 LINE L1 -1538 4608 4152 815 160 7 42 chr5 89646287 89646431 -113439101 - AluSq SINE Alu -93 220 82 1688 181 0 20 chr5 89646671 89646975 -113438557 - AluJo SINE Alu -14 298 1 24 32 0 0 chr5 89647181 89647212 -113438320 + AT_rich Low_complexity Low_complexity 1 31 0 369 102 0 0 chr5 89647258 89647317 -113438215 + (CA)n Simple_repeat Simple_repeat 2 60 0 864 234 129 42 chr5 89647705 89647991 -113437541 - MER102b DNA MER1_type -28 313 3 265 272 101 51 chr5 89648242 89648400 -113437132 - MIR3 SINE MIR -28 180 15 521 184 35 154 chr5 89649528 89649729 -113435803 - MER45A DNA AcHobo -1 177 1 2314 114 3 0 chr5 89649986 89650294 -113435238 - AluSx SINE Alu -3 309 1 21 36 0 0 chr5 89650296 89650324 -113435208 + AT_rich Low_complexity Low_complexity 1 28 0 2320 108 7 0 chr5 89650456 89650762 -113434770 + AluSg SINE Alu 1 308 -2 362 218 218 52 chr5 89651539 89651713 -113433819 - MIR SINE MIR -24 238 36 2045 113 48 10 chr5 89651805 89652098 -113433434 + AluSp SINE Alu 2 305 -8 2222 187 124 10 chr5 89652245 89652752 -113432780 + MLT1F1 LTR MaLR 3 567 0 1425 36 6 0 chr5 89655495 89655694 -113429838 + L1PA3 LINE L1 5967 6166 0 4796 108 56 28 chr5 89655695 89656469 -113429063 + L1PB2 LINE L1 5354 6148 -3 363 217 0 0 chr5 89656584 89656667 -113428865 - L1MB8 LINE L1 0 6178 6096 629 285 66 33 chr5 89657052 89657294 -113428238 + MIR SINE MIR 13 262 0 282 230 95 14 chr5 89657296 89657370 -113428162 + L2 LINE L2 3138 3217 -55 231 88 0 0 chr5 89657482 89657516 -113428016 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr5 89657868 89657905 -113427627 + AT_rich Low_complexity Low_complexity 1 37 0 477 34 0 0 chr5 89658231 89658290 -113427242 - AluY SINE Alu -13 297 239 2258 100 0 0 chr5 89658846 89659147 -113426385 - AluSx SINE Alu 0 301 1 530 274 67 40 chr5 89659466 89659689 -113425843 + L1ME1 LINE L1 18 246 -6613 2059 207 43 41 chr5 89660021 89660509 -113425023 + MLT1D LTR MaLR 15 503 -2 2410 231 36 32 chr5 89660517 89661110 -113424422 + L1ME1 LINE L1 2902 3500 -3457 1583 147 98 11 chr5 89661110 89661375 -113424157 - AluJo SINE Alu -24 288 1 2410 231 36 32 chr5 89661375 89661594 -113423938 + L1ME1 LINE L1 3500 3717 -3240 2246 114 12 12 chr5 89661594 89661936 -113423596 - L1M2 LINE L1 -614 5686 5345 * 6809 203 73 83 chr5 89661927 89662430 -113423102 + L1ME1 LINE L1 3721 4227 -2750 2030 191 67 61 chr5 89662430 89662922 -113422610 - LTR42 LTR ERVL 0 495 1 6809 203 73 83 chr5 89662922 89663929 -113421603 + L1ME1 LINE L1 4227 5242 -1735 2222 69 41 10 chr5 89663929 89664220 -113421312 + AluY SINE Alu 1 300 -11 6809 203 73 83 chr5 89664220 89664409 -113421123 + L1ME1 LINE L1 5242 5431 -1546 2203 96 66 36 chr5 89664409 89664773 -113420759 - THE1C LTR MaLR 0 375 1 6809 203 73 83 chr5 89664773 89666077 -113419455 + L1ME1 LINE L1 5431 6685 -292 1013 200 115 0 chr5 89666078 89666278 -113419254 - MER58A DNA MER1_type -1 223 1 1135 211 46 36 chr5 89666279 89666583 -113418949 + L1MB8 LINE L1 5871 6177 -1 1707 171 0 36 chr5 89666851 89666983 -113418549 + AluJo SINE Alu 1 136 -176 2164 100 7 3 chr5 89666983 89667272 -113418260 + AluSx SINE Alu 1 290 -22 1816 89 0 36 chr5 89667280 89667566 -113417966 + AluY SINE Alu 46 322 0 1707 171 0 36 chr5 89667566 89667728 -113417804 + AluJo SINE Alu 143 294 -18 2156 127 3 3 chr5 89669181 89669489 -113416043 - AluSg SINE Alu 0 310 3 226 323 77 8 chr5 89669688 89669818 -113415714 - LTR67 LTR ERVL -46 511 373 436 247 0 0 chr5 89670748 89670845 -113414687 + MIR SINE MIR 158 254 -8 2339 102 0 13 chr5 89673018 89673333 -113412199 - AluSx SINE Alu -1 311 1 242 317 40 0 chr5 89673599 89673700 -113411832 - MIR3 SINE MIR -29 179 75 1212 312 114 66 chr5 89674730 89675144 -113410388 + L2 LINE L2 1226 1619 -1694 2210 145 0 0 chr5 89675144 89675455 -113410077 - AluSx SINE Alu 0 312 2 1212 312 114 66 chr5 89675455 89677020 -113408512 + L2 LINE L2 1619 3298 -15 25 0 0 0 chr5 89677137 89677162 -113408370 + AT_rich Low_complexity Low_complexity 1 25 0 261 57 0 0 chr5 89677656 89677691 -113407841 + (TG)n Simple_repeat Simple_repeat 2 36 0 276 314 58 0 chr5 89678145 89678266 -113407266 + MIR SINE MIR 13 140 -122 384 22 0 0 chr5 89678542 89678587 -113406945 + (TG)n Simple_repeat Simple_repeat 2 46 0 389 258 77 26 chr5 89679026 89679181 -113406351 + MLT1K LTR MaLR 420 582 -6 2272 118 0 3 chr5 89679207 89679513 -113406019 + AluSx SINE Alu 1 305 -7 246 213 0 0 chr5 89679727 89679774 -113405758 + MIR SINE MIR 74 120 -142 379 284 92 0 chr5 89679932 89680073 -113405459 + L2 LINE L2 3160 3313 0 429 296 7 21 chr5 89681138 89681280 -113404252 + MIR SINE MIR 14 153 -109 209 275 62 0 chr5 89681387 89681467 -113404065 + MIR SINE MIR 174 258 -4 2518 80 3 6 chr5 89681584 89681898 -113403634 + AluSp SINE Alu 1 313 0 21 0 0 0 chr5 89682343 89682364 -113403168 + AT_rich Low_complexity Low_complexity 1 21 0 1551 262 56 51 chr5 89682676 89683405 -113402127 - L1MEd LINE L1 -5364 755 23 202 269 180 36 chr5 89683645 89683812 -113401720 - L2 LINE L2 -1 3312 3122 788 322 98 61 chr5 89683940 89684713 -113400819 - L2 LINE L2 -348 2966 2165 355 259 24 72 chr5 89684715 89684857 -113400675 - L2 LINE L2 -1384 1930 1796 2413 65 3 0 chr5 89684857 89685149 -113400383 - AluY SINE Alu -18 293 1 355 259 24 72 chr5 89685149 89685172 -113400360 - L2 LINE L2 -1518 1796 1773 514 231 102 78 chr5 89685369 89685600 -113399932 - MIR SINE MIR 0 262 23 868 161 21 57 chr5 89685600 89685793 -113399739 - L1MA7 LINE L1 0 6291 6106 514 231 102 78 chr5 89685793 89685816 -113399716 - MIR SINE MIR -239 23 2 286 136 0 0 chr5 89687290 89687334 -113398198 + MADE1 DNA Mariner 1 44 -36 409 259 15 23 chr5 89689799 89689930 -113395602 + MIR SINE MIR 16 145 -63 243 322 0 46 chr5 89690091 89690178 -113395354 + L2 LINE L2 3182 3264 -8 245 272 140 0 chr5 89690895 89691009 -113394523 - L2 LINE L2 0 3272 3143 507 260 33 29 chr5 89692293 89692473 -113393059 - L1ME3 LINE L1 0 6170 5993 186 103 0 0 chr5 89692669 89692698 -113392834 + (CA)n Simple_repeat Simple_repeat 2 30 0 478 265 47 24 chr5 89692951 89693121 -113392411 + MIR SINE MIR 34 207 -55 782 257 40 5 chr5 89693280 89693482 -113392050 + MER3 DNA MER1_type 1 209 0 440 320 27 41 chr5 89694738 89694957 -113390575 - MIR SINE MIR -23 239 24 872 189 0 30 chr5 89695602 89695771 -113389761 - FRAM SINE Alu -2 164 1 2231 110 3 7 chr5 89695825 89696124 -113389408 - AluSg SINE Alu -11 299 2 2284 112 0 6 chr5 89699617 89699931 -113385601 - AluSx SINE Alu 0 312 1 589 283 11 27 chr5 89699976 89700160 -113385372 + MIR SINE MIR 18 198 -64 1867 141 0 43 chr5 89700175 89700479 -113385053 + AluJo SINE Alu 1 291 -21 180 135 0 0 chr5 89700530 89700567 -113384965 + (T)n Simple_repeat Simple_repeat 1 37 0 544 218 0 0 chr5 89701736 89701837 -113383695 + MER5A DNA MER1_type 9 109 -80 202 250 59 29 chr5 89701883 89701951 -113383581 + MIR3 SINE MIR 6 75 -133 1876 148 10 0 chr5 89702090 89702395 -113383137 + AluSx SINE Alu 1 308 -4 2824 6 0 0 chr5 89703288 89703601 -113381931 + AluYb8 SINE Alu 1 313 -5 3726 133 43 13 chr5 89704235 89704557 -113380975 - L1PA16 LINE L1 0 6166 5855 2336 68 0 3 chr5 89704557 89704853 -113380679 - AluY SINE Alu -16 295 1 3726 133 43 13 chr5 89704853 89705153 -113380379 - L1PA16 LINE L1 -311 5855 5525 2271 227 111 42 chr5 89705153 89705725 -113379807 - L1MC4 LINE L1 -225 7817 7286 2166 107 0 19 chr5 89705725 89706034 -113379498 + AluSx SINE Alu 2 304 -8 2271 227 111 42 chr5 89706034 89706103 -113379429 - L1MC4 LINE L1 -756 7286 7223 2018 142 0 7 chr5 89706103 89706413 -113379119 + AluJo SINE Alu 1 308 -4 2271 227 111 42 chr5 89706413 89706617 -113378915 - L1MC4 LINE L1 -819 7223 6913 316 225 17 117 chr5 89707189 89707309 -113378223 + MER5B DNA MER1_type 1 108 -70 276 317 70 86 chr5 89707884 89708313 -113377219 - L1MEd LINE L1 -5394 725 304 283 287 78 0 chr5 89708392 89708507 -113377025 - L1MEd LINE L1 -5935 184 61 1869 180 50 54 chr5 89708675 89709135 -113376397 + MLT1C LTR MaLR 3 460 -7 576 261 106 11 chr5 89709770 89709958 -113375574 + MIR SINE MIR 57 262 0 353 232 12 143 chr5 89711464 89711632 -113373900 + MIR SINE MIR 88 233 -29 361 42 0 0 chr5 89711756 89711804 -113373728 + U5 snRNA snRNA 2 49 -67 1776 64 4 4 chr5 89711847 89712114 -113373418 - AluY SINE Alu 0 316 50 230 81 27 0 chr5 89712294 89712331 -113373201 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2356 80 10 6 chr5 89714654 89714965 -113370567 - AluSx SINE Alu 0 312 1 1902 132 331 48 chr5 89716236 89716713 -113368819 - LTR18B LTR ERVL 0 614 3 1820 157 10 3 chr5 89716978 89717277 -113368255 + AluJo SINE Alu 1 301 -11 182 259 138 0 chr5 89717277 89717335 -113368197 + L2 LINE L2 3012 3077 -195 1023 177 21 0 chr5 89719986 89720172 -113365360 - L1MD2 LINE L1 -7 6352 6163 1079 136 6 0 chr5 89721172 89721334 -113364198 + AluSx SINE Alu 1 163 -149 2261 102 0 0 chr5 89721382 89721685 -113363847 - AluSx SINE Alu -9 303 1 402 57 0 0 chr5 89722463 89722516 -113363016 + (CA)n Simple_repeat Simple_repeat 2 54 0 228 182 0 0 chr5 89722627 89722671 -113362861 + (TAA)n Simple_repeat Simple_repeat 1 44 0 628 286 112 13 chr5 89722673 89722897 -113362635 - MIR SINE MIR -1 261 16 1873 111 7 37 chr5 89723686 89723859 -113361673 - AluSx SINE Alu -4 308 146 2403 61 0 0 chr5 89723859 89724155 -113361377 - AluY SINE Alu -14 297 2 1873 111 7 37 chr5 89724155 89724278 -113361254 - AluSx SINE Alu -166 146 21 3422 196 0 12 chr5 89724375 89725065 -113360467 - L1 LINE L1 -1056 5090 4409 1971 114 16 29 chr5 89725187 89725495 -113360037 - AluSx SINE Alu -8 304 1 238 260 41 7 chr5 89725912 89726058 -113359474 + L1MC4a LINE L1 3121 3271 -2875 388 364 106 35 chr5 89726058 89726434 -113359098 + L2 LINE L2 2491 2893 -421 3559 143 117 114 chr5 89726440 89726603 -113358929 - L1MC3 LINE L1 0 7785 7624 1960 86 57 0 chr5 89726603 89726882 -113358650 - AluY SINE Alu -16 295 1 3559 143 117 114 chr5 89726882 89727314 -113358218 - L1MC3 LINE L1 -161 7624 7106 245 279 25 0 chr5 89727314 89727393 -113358139 - MLT1F1 LTR MaLR -436 131 51 3559 143 117 114 chr5 89727393 89727683 -113357849 - L1MC3 LINE L1 -679 7106 6818 881 129 0 0 chr5 89727683 89727807 -113357725 + AluJo/FLAM SINE Alu 1 124 -188 1797 122 0 0 chr5 89727809 89728071 -113357461 + AluSq SINE Alu 1 262 -51 1576 185 103 12 chr5 89728120 89728460 -113357072 - L1MC3 LINE L1 -957 6828 6458 513 334 163 6 chr5 89728502 89728840 -113356692 + L2 LINE L2 2923 3313 0 727 287 136 29 chr5 89728845 89729474 -113356058 + L1MC4a LINE L1 4072 4632 -1655 2465 44 0 0 chr5 89729474 89729771 -113355761 + AluY SINE Alu 1 297 -14 727 287 136 29 chr5 89729771 89730469 -113355063 + L1MC4a LINE L1 4632 5544 -743 2465 236 37 13 chr5 89730498 89731125 -113354407 + L1ME2 LINE L1 5488 6129 -35 287 288 111 45 chr5 89731207 89731450 -113354082 + L1MC4a LINE L1 5627 5885 -1923 800 158 0 0 chr5 89734203 89734323 -113351209 - FLAM_A SINE Alu -12 130 11 483 235 51 102 chr5 89735829 89736025 -113349507 + MIR SINE MIR 46 231 -31 1441 246 103 59 chr5 89736329 89737055 -113348477 - MER49 LTR ERV1 0 923 1 353 317 114 30 chr5 89737148 89737315 -113348217 - L3 LINE CR1 -2 1575 1395 273 298 139 36 chr5 89737578 89737830 -113347702 - MLT1J LTR MaLR -95 416 139 306 221 116 0 chr5 89738437 89738523 -113347009 - L1ME3 LINE L1 -87 6075 5980 225 0 0 0 chr5 89740136 89740161 -113345371 + (A)n Simple_repeat Simple_repeat 1 25 0 482 299 125 5 chr5 89742492 89742676 -113342856 + MIR SINE MIR 47 252 -10 1994 112 4 0 chr5 89742990 89743266 -113342266 + AluSx SINE Alu 9 285 -27 182 330 101 28 chr5 89743554 89743663 -113341869 - MER5B DNA MER1_type -14 164 48 426 280 76 90 chr5 89743689 89744046 -113341486 - L1ME4a LINE L1 0 6121 5770 758 213 264 4 chr5 89744061 89744167 -113341365 - MER5C DNA MER1_type -4 320 243 2387 68 7 0 chr5 89744167 89744476 -113341056 + AluY SINE Alu 1 311 0 758 213 264 4 chr5 89744476 89744623 -113340909 - MER5C DNA MER1_type -81 243 1 311 354 50 82 chr5 89744670 89745046 -113340486 + L2 LINE L2 2810 3173 -99 246 192 0 0 chr5 89745105 89745157 -113340375 + (TGGA)n Simple_repeat Simple_repeat 3 54 0 525 279 66 0 chr5 89745908 89746044 -113339488 + MIR SINE MIR 14 158 -104 377 211 116 0 chr5 89746799 89746894 -113338638 + MIR SINE MIR 78 183 -79 400 276 190 12 chr5 89746950 89747113 -113338419 + L3 LINE CR1 1374 1565 -12 199 321 0 0 chr5 89747113 89747169 -113338363 - L2 LINE L2 0 3272 3217 2896 157 103 18 chr5 89747403 89748013 -113337519 + MER67C LTR ERV1 49 710 0 705 206 42 18 chr5 89748708 89748873 -113336659 - LTR39 LTR ERV1 -18 765 597 1086 173 31 117 chr5 89748943 89749267 -113336265 - LTR39 LTR ERV1 -476 307 12 2032 91 17 20 chr5 89749812 89750108 -113335424 - AluSx SINE Alu -17 295 1 1528 129 0 5 chr5 89750963 89751180 -113334352 - AluSg/x SINE Alu -8 302 87 349 288 36 49 chr5 89751388 89751544 -113333988 + MIR SINE MIR 4 151 -62 832 277 89 36 chr5 89751965 89752775 -113332757 + L2 LINE L2 2371 3313 0 8968 237 42 19 chr5 89754203 89755198 -113330334 + L1P LINE L1 2139 3110 -3036 2104 130 7 0 chr5 89755198 89755325 -113330207 + AluSg SINE Alu 1 126 -184 194 0 39 0 chr5 89755325 89755351 -113330181 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2104 130 7 0 chr5 89755351 89755530 -113330002 + AluSg SINE Alu 126 309 -1 8968 237 42 19 chr5 89755530 89756732 -113328800 + L1P LINE L1 3110 4406 -1740 342 0 0 0 chr5 89756732 89756770 -113328762 + (CA)n Simple_repeat Simple_repeat 2 39 0 8968 237 42 19 chr5 89756770 89757157 -113328375 + L1P LINE L1 4406 4783 -1363 542 291 31 8 chr5 89757140 89757398 -113328134 + L1 LINE L1 4945 5208 -938 * 1941 112 8 0 chr5 89757541 89757801 -113327731 - AluSx SINE Alu -49 263 2 2042 305 238 10 chr5 89757816 89759146 -113326386 - L2 LINE L2 -700 2614 981 1371 180 14 28 chr5 89759393 89759676 -113325856 - AluJo SINE Alu -33 279 1 2084 120 13 0 chr5 89759682 89759991 -113325541 - AluSp SINE Alu 0 313 1 1208 187 32 5 chr5 89759997 89760216 -113325316 - LTR40c LTR ERVL -24 441 217 2126 103 0 45 chr5 89761222 89761532 -113324000 + AluSq SINE Alu 1 296 -17 206 125 21 0 chr5 89761714 89761762 -113323770 + (TA)n Simple_repeat Simple_repeat 2 50 0 243 151 94 19 chr5 89761767 89761873 -113323659 + (TTATA)n Simple_repeat Simple_repeat 1 114 0 418 98 72 18 chr5 89761882 89762328 -113323204 + (TA)n Simple_repeat Simple_repeat 1 470 0 584 150 53 9 chr5 89762457 89762570 -113322962 + L1MB3 LINE L1 6066 6183 0 5664 167 48 20 chr5 89762782 89763390 -113322142 - L1PA16 LINE L1 -40 6126 5537 2350 102 0 0 chr5 89763390 89763693 -113321839 - AluSc SINE Alu -6 303 1 5664 167 48 20 chr5 89763693 89764735 -113320797 - L1PA16 LINE L1 -629 5537 4526 246 32 0 0 chr5 89764735 89764766 -113320766 + (TC)n Simple_repeat Simple_repeat 2 32 0 5664 167 48 20 chr5 89764766 89764940 -113320592 - L1PA16 LINE L1 -1640 4526 4358 2288 99 3 13 chr5 89764940 89765253 -113320279 - AluSg SINE Alu 0 310 1 5664 167 48 20 chr5 89765253 89765521 -113320011 - L1PA16 LINE L1 -1808 4358 3979 615 243 26 12 chr5 89765973 89766148 -113319384 + MER52A LTR ERV1 343 1232 -13 1189 218 15 7 chr5 89766152 89766423 -113319109 - L1PA16 LINE L1 -2172 3974 3702 1748 125 12 104 chr5 89767560 89767888 -113317644 - AluSx SINE Alu -14 298 1 1256 264 149 19 chr5 89768236 89769062 -113316470 - L1MEd LINE L1 -4728 1582 592 351 0 0 0 chr5 89769423 89769450 -113316082 + (CA)n Simple_repeat Simple_repeat 1 66 0 351 0 0 0 chr5 89769450 89769489 -113316043 + (CA)n Simple_repeat Simple_repeat 2 40 0 2279 86 30 7 chr5 89769824 89770126 -113315406 + AluSc SINE Alu 1 309 0 320 285 81 41 chr5 89770415 89770538 -113314994 - MIR3 SINE MIR -76 132 5 219 204 296 45 chr5 89770942 89771030 -113314502 - L2 LINE L2 -6 3307 3198 213 39 0 0 chr5 89772715 89772741 -113312791 + (TTG)n Simple_repeat Simple_repeat 2 27 0 532 281 129 28 chr5 89774721 89774938 -113310594 + MIR SINE MIR 3 241 -21 712 204 140 6 chr5 89775155 89775312 -113310220 + MER5B DNA MER1_type 1 178 0 378 0 0 0 chr5 89775650 89775692 -113309840 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr5 89776390 89776411 -113309121 + AT_rich Low_complexity Low_complexity 1 21 0 1611 112 5 5 chr5 89776485 89776708 -113308824 - AluSq SINE Alu -90 223 1 263 281 0 0 chr5 89777008 89777065 -113308467 - MIR SINE MIR -6 256 200 2328 115 3 59 chr5 89777065 89777422 -113308110 + MER1B DNA MER1_type 1 337 0 698 164 250 13 chr5 89777716 89777868 -113307664 - MER5A DNA MER1_type -1 188 1 20341 74 21 5 chr5 89777881 89781463 -113304069 + L1PA7 LINE L1 2492 6129 -25 208 70 47 0 chr5 89781490 89781533 -113303999 + (TA)n Simple_repeat Simple_repeat 1 45 0 274 233 111 72 chr5 89782904 89783166 -113302366 - L1ME4a LINE L1 -57 6064 5793 495 278 110 0 chr5 89783196 89783387 -113302145 - L1ME4a LINE L1 -420 5701 5490 1730 191 80 11 chr5 89784832 89785260 -113300272 - MER89 LTR ERV1 0 559 1 659 271 79 10 chr5 89785834 89786037 -113299495 + MIR SINE MIR 19 235 -27 1830 151 46 0 chr5 89787365 89787649 -113297883 - AluJo SINE Alu -15 297 1 420 271 90 8 chr5 89787666 89787812 -113297720 + MIR SINE MIR 36 192 -57 268 245 0 0 chr5 89787834 89787887 -113297645 + MER112 DNA MER1_type 19 71 -189 14697 103 149 6 chr5 89787896 89790318 -113295214 + L1PB1 LINE L1 164 2930 -3933 248 275 7 49 chr5 89790498 89790640 -113294892 + A-rich Low_complexity Low_complexity 5 140 0 6102 93 38 16 chr5 89790759 89791764 -113293768 + L1PB1 LINE L1 5843 6865 -2 485 247 129 67 chr5 89791766 89792122 -113293410 + L1M4 LINE L1 3253 3630 -2516 2275 121 0 3 chr5 89792136 89792449 -113293083 - AluSx SINE Alu 0 312 1 830 195 25 6 chr5 89792455 89792614 -113292918 - FRAM SINE Alu -14 162 1 811 11 0 11 chr5 89792724 89792819 -113292713 + L1PA4 LINE L1 3 96 -6050 40083 31 1 1 chr5 89792819 89798351 -113287181 + L1PA4 LINE L1 623 6155 0 484 234 18 110 chr5 89798355 89798573 -113286959 + MER112 DNA MER1_type 62 259 -1 2131 269 92 53 chr5 89798620 89799962 -113285570 - L1ME LINE L1 -4673 1407 20 2244 130 0 0 chr5 89800183 89800491 -113285041 + AluSx SINE Alu 1 308 -4 768 197 15 0 chr5 89800526 89800658 -113284874 + MER58B DNA MER1_type 193 326 -15 1104 237 127 15 chr5 89800687 89801097 -113284435 + L1M4 LINE L1 2163 2618 -3528 577 315 0 0 chr5 89801344 89801493 -113284039 - LTR16B LTR ERVL -315 149 1 1715 160 39 39 chr5 89801883 89802195 -113283337 - AluJo SINE Alu 0 312 1 2315 96 0 7 chr5 89802791 89803092 -113282440 + AluSq SINE Alu 1 299 -14 2416 81 0 0 chr5 89803944 89804240 -113281292 - AluSx SINE Alu -16 296 1 2014 63 0 15 chr5 89804306 89804574 -113280958 + AluY SINE Alu 42 305 -6 4533 230 40 30 chr5 89804999 89805566 -113279966 + L1 LINE L1 2124 2684 -3462 2086 84 0 7 chr5 89805566 89805852 -113279680 - L1PA10 LINE L1 -9 6159 5876 4533 230 40 30 chr5 89805852 89806432 -113279100 + L1 LINE L1 2684 3293 -2853 1753 156 35 7 chr5 89806432 89806714 -113278818 + AluJb SINE Alu 1 290 -22 4533 230 40 30 chr5 89806714 89807141 -113278391 + L1 LINE L1 3293 3714 -2432 277 309 12 0 chr5 89807880 89807961 -113277571 + MIR SINE MIR 72 153 -55 663 254 57 12 chr5 89809057 89809305 -113276227 + MIR SINE MIR 2 260 -2 2060 102 3 0 chr5 89809849 89810164 -113275368 + AluSq SINE Alu 1 316 0 326 356 145 40 chr5 89810316 89810770 -113274762 - L2 LINE L2 -223 3049 2544 2106 74 7 3 chr5 89811977 89812260 -113273272 + AluSx SINE Alu 1 284 -28 2842 129 144 84 chr5 89812300 89812829 -113272703 - Tigger3(Golem) DNA MER2_type 0 3028 2433 2040 97 0 53 chr5 89812829 89813129 -113272403 - AluSc SINE Alu -25 284 1 2842 129 144 84 chr5 89813129 89813406 -113272126 - Tigger3(Golem) DNA MER2_type -595 2433 2174 1041 186 74 0 chr5 89813404 89813635 -113271897 - Tigger3(Golem) DNA MER2_type -2780 249 2 * 419 310 77 13 chr5 89815105 89815260 -113270272 - MIR SINE MIR -75 187 23 1415 191 17 27 chr5 89815263 89815556 -113269976 + AluJb SINE Alu 1 290 -22 2121 99 35 3 chr5 89817167 89817450 -113268082 + AluSc SINE Alu 1 292 -17 2478 84 7 0 chr5 89817502 89817810 -113267722 + AluSx SINE Alu 1 310 -2 468 0 0 0 chr5 89817810 89817862 -113267670 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 24 32 0 0 chr5 89817923 89817954 -113267578 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr5 89818635 89818700 -113266832 + AT_rich Low_complexity Low_complexity 1 65 0 536 290 47 6 chr5 89819459 89819595 -113265937 + MIR SINE MIR 13 159 -103 718 217 29 0 chr5 89819595 89819770 -113265762 + MER104 DNA MER2_type 1 180 0 536 290 47 6 chr5 89819770 89819802 -113265730 + MIR SINE MIR 159 188 -74 207 0 0 0 chr5 89819961 89819984 -113265548 + (A)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr5 89822858 89822886 -113262646 + AT_rich Low_complexity Low_complexity 1 28 0 2141 105 18 0 chr5 89823921 89824206 -113261326 - AluSg SINE Alu -20 290 1 281 261 52 60 chr5 89824419 89824553 -113260979 - L2 LINE L2 0 3313 3181 959 156 0 19 chr5 89824628 89824782 -113260750 - FRAM SINE Alu -15 151 1 200 302 156 40 chr5 89824783 89825008 -113260524 + L2 LINE L2 2122 2372 -942 369 294 135 0 chr5 89825246 89825372 -113260160 + L2 LINE L2 3171 3313 0 227 278 312 29 chr5 89825405 89825578 -113259954 - L2 LINE L2 -221 3092 2871 761 262 26 56 chr5 89825596 89825863 -113259669 + L2 LINE L2 3042 3300 -13 1855 188 124 2 chr5 89825949 89826106 -113259426 - L1MA10 LINE L1 -8 6326 6170 2905 209 83 38 chr5 89826106 89826952 -113258580 - L1MC4 LINE L1 -743 5901 5095 1900 138 149 34 chr5 89826952 89827023 -113258509 - MSTA LTR MaLR -1 427 366 2257 94 3 0 chr5 89827023 89827322 -113258210 + AluSq SINE Alu 1 300 -13 1900 138 149 34 chr5 89827322 89827633 -113257899 - MSTA LTR MaLR -62 366 1 2905 209 83 38 chr5 89827633 89827691 -113257841 - L1MC4 LINE L1 -1549 5095 5041 2204 105 20 0 chr5 89827691 89827986 -113257546 - AluSx SINE Alu -11 301 1 2905 209 83 38 chr5 89827986 89828523 -113257009 - L1MC4 LINE L1 -1603 5041 4977 1646 237 36 49 chr5 89828495 89829022 -113256510 - L1MC4 LINE L1 -5973 569 50 * 925 138 7 123 chr5 89829088 89829239 -113256293 - L1MB8 LINE L1 -5 6173 6065 2373 77 10 0 chr5 89829239 89829538 -113255994 + AluSp SINE Alu 1 302 -11 925 138 7 123 chr5 89829538 89829655 -113255877 - L1MB8 LINE L1 -113 6065 5936 747 269 47 10 chr5 89829658 89829851 -113255681 - L2 LINE L2 -565 2749 2550 438 327 134 24 chr5 89830085 89830593 -113254939 + L1MEd LINE L1 269 832 -5287 180 0 0 0 chr5 89830595 89830615 -113254917 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1554 167 44 75 chr5 89830615 89830777 -113254755 - MLT1A1 LTR MaLR -15 350 185 1936 155 0 19 chr5 89830777 89831087 -113254445 + AluJo SINE Alu 1 304 -8 1554 167 44 75 chr5 89831087 89831284 -113254248 - MLT1A1 LTR MaLR -180 185 2 361 259 119 17 chr5 89831385 89831467 -113254065 + L1MEd LINE L1 895 967 -5343 1959 137 3 7 chr5 89831467 89831759 -113253773 + AluSx SINE Alu 1 291 -21 361 259 119 17 chr5 89831759 89832113 -113253419 + L1MEd LINE L1 967 1417 -4893 22 0 0 0 chr5 89832160 89832182 -113253350 + AT_rich Low_complexity Low_complexity 1 22 0 651 120 0 0 chr5 89832182 89832282 -113253250 + AluSp/q SINE Alu 206 305 -8 308 261 35 17 chr5 89832314 89832429 -113253103 - L2 LINE L2 -208 3105 2989 1682 138 33 41 chr5 89832433 89832796 -113252736 - THE1C LTR MaLR 0 375 16 345 263 88 18 chr5 89883020 89883191 -113202341 - L1ME4a LINE L1 -2 6119 5937 207 63 32 63 chr5 89883221 89883284 -113202248 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 325 242 47 102 chr5 89883313 89883382 -113202150 - L1ME4a LINE L1 -162 5959 5888 2316 94 0 3 chr5 89883382 89883679 -113201853 - AluSc SINE Alu -13 296 1 325 242 47 102 chr5 89883679 89883824 -113201708 - L1ME4a LINE L1 -233 5888 5757 1327 218 109 23 chr5 89884288 89884720 -113200812 + L1MEd LINE L1 2667 3135 -2994 1010 231 35 45 chr5 89884716 89885027 -113200505 + L1ME1 LINE L1 5855 6162 -4 * 2169 111 23 13 chr5 89885896 89886202 -113199330 + AluSc SINE Alu 1 309 0 2501 167 47 9 chr5 89886257 89886707 -113198825 + MLT1C LTR MaLR 1 467 0 1571 204 3 10 chr5 89887145 89887453 -113198079 - AluJo SINE Alu -6 306 1 245 274 43 94 chr5 89888654 89888771 -113196761 - L2 LINE L2 0 3272 3162 16625 136 13 103 chr5 89888972 89892417 -113193115 + L1PA7 LINE L1 12 3147 -2999 17133 83 9 6 chr5 89892517 89895524 -113190008 + L1PA7 LINE L1 3140 6154 0 325 218 184 81 chr5 89895524 89895698 -113189834 - MIR SINE MIR -40 222 31 694 221 15 7 chr5 89895791 89895927 -113189605 - FRAM SINE Alu -39 137 1 1131 229 10 62 chr5 89896213 89896312 -113189220 + L1MC5 LINE L1 5556 5659 -2149 2390 101 7 0 chr5 89896312 89896620 -113188912 + AluSx SINE Alu 1 310 -2 1131 229 10 62 chr5 89896620 89896812 -113188720 + L1MC5 LINE L1 5659 5832 -1976 1698 138 3 21 chr5 89896817 89897099 -113188433 - Tigger3(Golem) DNA MER2_type 0 3038 2762 1933 137 0 13 chr5 89897105 89897405 -113188127 - AluSg SINE Alu -12 298 3 1877 28 0 0 chr5 89897405 89897616 -113187916 + SVA Other Other 748 960 -426 1240 218 150 85 chr5 89898249 89898578 -113186954 + L1MC5 LINE L1 6616 6999 -962 2319 91 0 16 chr5 89898578 89898886 -113186646 + AluSq SINE Alu 3 305 -8 1240 218 150 85 chr5 89898886 89899121 -113186411 + L1MC5 LINE L1 6999 7217 -744 1758 99 99 7 chr5 89899174 89899446 -113186086 + AluSx SINE Alu 1 297 -15 322 242 19 39 chr5 89899446 89899643 -113185889 + L1MC5 LINE L1 7308 7530 -431 4650 129 19 32 chr5 89899675 89900179 -113185353 + Tigger3(Golem) DNA MER2_type 2239 2729 -299 2041 100 9 62 chr5 89900179 89900499 -113185033 - AluSq SINE Alu -10 303 1 4650 129 19 32 chr5 89900499 89900795 -113184737 + Tigger3(Golem) DNA MER2_type 2729 3028 0 493 244 70 29 chr5 89900795 89900967 -113184565 + L1MC5 LINE L1 7720 7898 -63 1732 125 29 22 chr5 89901228 89901345 -113184187 + AluJb SINE Alu 1 116 -196 189 0 0 0 chr5 89901345 89901366 -113184166 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1732 125 29 22 chr5 89901366 89901520 -113184012 + AluJb SINE Alu 116 274 -38 193 311 0 16 chr5 89902989 89903050 -113182482 - L2 LINE L2 -1 3271 3212 2263 102 7 0 chr5 89903057 89903352 -113182180 - AluY SINE Alu 0 311 15 1732 140 29 46 chr5 89903594 89903901 -113181631 - AluJo SINE Alu -10 302 1 365 291 164 0 chr5 89904059 89904193 -113181339 - MIR SINE MIR -14 248 93 360 263 113 65 chr5 89904620 89904765 -113180767 - L2 LINE L2 -1 3312 3155 2288 121 33 33 chr5 89904765 89905129 -113180403 + THE1B LTR MaLR 1 364 0 360 263 113 65 chr5 89905129 89905169 -113180363 - L2 LINE L2 -158 3155 3118 2109 257 101 57 chr5 89905378 89905575 -113179957 - L1ME LINE L1 -4769 1418 1231 2278 110 3 10 chr5 89905575 89905883 -113179649 - AluSx SINE Alu -6 306 1 2109 257 101 57 chr5 89905883 89906012 -113179520 - L1ME LINE L1 -4956 1231 1109 1991 147 0 23 chr5 89906012 89906318 -113179214 - AluJo SINE Alu -13 299 1 2109 257 101 57 chr5 89906318 89906542 -113178990 - L1ME LINE L1 -5078 1109 896 1943 119 7 34 chr5 89906542 89906836 -113178696 - AluSq SINE Alu -5 308 23 2109 257 101 57 chr5 89906836 89907601 -113177931 - L1ME LINE L1 -5291 896 34 631 320 57 49 chr5 89907661 89908011 -113177521 - L2 LINE L2 -578 2736 2384 211 345 35 0 chr5 89908062 89908149 -113177383 - L2 LINE L2 -827 2487 2398 827 205 139 57 chr5 89908819 89909136 -113176396 - MLT1A2 LTR MaLR -47 343 1 * 1033 172 118 30 chr5 89909136 89909466 -113176066 + Charlie1b DNA MER1_type 97 455 -68 1430 138 0 87 chr5 89909468 89909757 -113175775 + AluJo SINE Alu 3 266 -46 343 279 128 64 chr5 89910077 89910389 -113175143 + L1M2 LINE L1 480 811 -6038 290 222 59 52 chr5 89911525 89911678 -113173854 + MLT1H LTR MaLR 396 549 0 1559 152 0 4 chr5 89911842 89912073 -113173459 + AluJb SINE Alu 1 230 -82 249 108 0 0 chr5 89912082 89912119 -113173413 + (A)n Simple_repeat Simple_repeat 1 37 0 211 283 236 0 chr5 89912624 89912730 -113172802 - MIR3 SINE MIR -14 194 64 408 217 0 0 chr5 89912789 89912872 -113172660 - LTR16C LTR ERVL -14 477 395 475 207 132 132 chr5 89912874 89912942 -113172590 + MER5A DNA MER1_type 10 77 -112 1758 157 0 38 chr5 89912942 89913255 -113172277 + AluJo SINE Alu 1 302 0 475 207 132 132 chr5 89913255 89913359 -113172173 + MER5A DNA MER1_type 76 183 -6 912 265 85 13 chr5 89914266 89914558 -113170974 - L1M4 LINE L1 -2341 3805 3478 2138 109 10 3 chr5 89914558 89914860 -113170672 - AluSg SINE Alu -6 304 1 912 265 85 13 chr5 89914860 89914945 -113170587 - L1M4 LINE L1 -2668 3478 3401 444 233 29 50 chr5 89915152 89915227 -113170305 + MER5A DNA MER1_type 39 126 -63 2306 96 0 0 chr5 89915227 89915519 -113170013 - AluSg SINE Alu -18 292 1 444 233 29 50 chr5 89915519 89915582 -113169950 + MER5A DNA MER1_type 126 189 0 590 185 131 23 chr5 89916003 89916133 -113169399 - MIR SINE MIR -83 179 36 180 237 85 0 chr5 89916175 89916234 -113169298 - MIR SINE MIR -176 86 23 370 333 8 16 chr5 89916259 89916382 -113169150 - L2 LINE L2 0 3313 3192 579 175 58 0 chr5 89916599 89916736 -113168796 - L1MC4 LINE L1 -135 7907 7763 676 163 13 33 chr5 89916750 89916903 -113168629 + MLT1A1 LTR MaLR 1 150 -215 563 222 159 0 chr5 89916995 89917171 -113168361 + MLT1A1 LTR MaLR 302 505 0 438 282 27 0 chr5 89917183 89917332 -113168200 - L1MC4 LINE L1 -1431 6611 6459 189 0 0 0 chr5 89918159 89918180 -113167352 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 489 226 11 91 chr5 89918862 89919048 -113166484 + MLT1K LTR MaLR 416 586 -2 785 183 0 21 chr5 89919257 89919399 -113166133 - AluJo SINE Alu -173 139 1 423 183 0 0 chr5 89919760 89919842 -113165690 + (TA)n Simple_repeat Simple_repeat 2 83 0 847 118 0 0 chr5 89920509 89920619 -113164913 - AluSg/x SINE Alu -27 283 174 2936 9 0 0 chr5 89922309 89922627 -113162905 + AluYb8 SINE Alu 1 318 0 2217 71 0 3 chr5 89922854 89923183 -113162349 - AluSg SINE Alu 0 328 1 225 170 0 0 chr5 89923927 89923942 -113161590 + GA-rich Low_complexity Low_complexity 1 15 -32 2177 108 61 19 chr5 89923942 89924302 -113161230 - THE1C LTR MaLR 0 375 1 225 170 0 0 chr5 89924302 89924333 -113161199 + GA-rich Low_complexity Low_complexity 14 47 0 181 324 42 28 chr5 89924815 89924886 -113160646 + L3 LINE CR1 2 73 -1504 197 62 0 31 chr5 89926617 89926649 -113158883 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1648 142 3 91 chr5 89926701 89927019 -113158513 - AluJo SINE Alu -22 290 1 2392 88 3 19 chr5 89927715 89928033 -113157499 + AluSp SINE Alu 1 313 0 201 175 0 0 chr5 89929452 89929492 -113156040 + (CA)n Simple_repeat Simple_repeat 1 40 0 1196 180 111 25 chr5 89931446 89931762 -113153770 + MER2 DNA MER2_type 1 343 -1 2402 98 0 0 chr5 89931799 89932106 -113153426 + AluY SINE Alu 1 307 -4 2174 90 30 10 chr5 89932115 89932415 -113153117 + AluSx SINE Alu 7 312 0 2119 96 4 11 chr5 89933049 89933330 -113152202 - AluSx SINE Alu -18 294 16 2028 153 42 0 chr5 89934697 89935030 -113150502 - MER7A DNA MER2_type 0 346 2 345 288 85 1 chr5 89937054 89937192 -113148340 + MIR3 SINE MIR 33 176 -32 2031 141 0 3 chr5 89937377 89937674 -113147858 - AluJb SINE Alu -16 296 1 789 245 29 5 chr5 89937907 89938111 -113147421 + MER3 DNA MER1_type 1 209 0 648 211 20 0 chr5 89939360 89939507 -113146025 + MER3 DNA MER1_type 8 157 -52 2319 88 0 7 chr5 89939644 89939939 -113145593 + AluSg SINE Alu 1 293 -17 2242 106 7 3 chr5 89940325 89940652 -113144880 + AluSx SINE Alu 1 312 0 197 333 0 0 chr5 89942047 89942098 -113143434 + L2 LINE L2 3251 3301 -12 227 382 118 0 chr5 89943149 89943259 -113142273 + L2 LINE L2 3134 3256 -16 407 350 6 22 chr5 89943933 89944113 -113141419 - MER5B DNA MER1_type 0 178 2 435 259 65 9 chr5 89944123 89944231 -113141301 + L2 LINE L2 3159 3272 0 24 0 0 0 chr5 89945056 89945080 -113140452 + AT_rich Low_complexity Low_complexity 1 24 0 23 68 0 0 chr5 89946399 89946443 -113139089 + AT_rich Low_complexity Low_complexity 1 44 0 230 176 20 0 chr5 89947641 89947692 -113137840 + (CATA)n Simple_repeat Simple_repeat 3 54 0 1712 200 13 3 chr5 89947775 89948075 -113137457 - AluJo SINE Alu -9 303 1 23 33 0 0 chr5 89948138 89948168 -113137364 + AT_rich Low_complexity Low_complexity 1 30 0 2097 105 0 4 chr5 89948654 89948931 -113136601 + AluSg SINE Alu 1 276 -34 5979 25 31 13 chr5 89948940 89949624 -113135908 + SVA Other Other 691 1386 0 334 286 111 37 chr5 89949983 89950172 -113135360 - MIR SINE MIR -40 222 20 22 0 0 0 chr5 89950271 89950293 -113135239 + AT_rich Low_complexity Low_complexity 1 22 0 1950 78 103 14 chr5 89950387 89950669 -113134863 + AluSp SINE Alu 1 307 -6 335 328 143 0 chr5 89951236 89951355 -113134177 + L2 LINE L2 3136 3271 -1 27 29 0 0 chr5 89951655 89951689 -113133843 + AT_rich Low_complexity Low_complexity 1 34 0 2116 129 10 0 chr5 89951918 89952221 -113133311 + AluSx SINE Alu 2 307 -5 22 56 0 0 chr5 89953777 89953813 -113131719 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 89953998 89954021 -113131511 + AT_rich Low_complexity Low_complexity 1 23 0 2137 113 7 3 chr5 89954080 89954380 -113131152 + AluSx SINE Alu 3 303 -9 958 171 72 5 chr5 89954834 89955027 -113130505 + MER3 DNA MER1_type 3 208 -1 1041 148 18 0 chr5 89955508 89955677 -113129855 - AluSq SINE Alu -7 306 135 2428 79 0 0 chr5 89955678 89955981 -113129551 - AluY SINE Alu -8 303 1 267 31 0 0 chr5 89956203 89956235 -113129297 + (CAA)n Simple_repeat Simple_repeat 2 33 0 23 33 0 0 chr5 89959311 89959341 -113126191 + AT_rich Low_complexity Low_complexity 1 30 0 2255 103 0 0 chr5 89959570 89959872 -113125660 - AluY SINE Alu -9 302 1 218 339 88 61 chr5 89960205 89960580 -113124952 + L2 LINE L2 2815 3199 -73 2146 108 14 0 chr5 89960851 89961146 -113124386 + AluSx SINE Alu 1 299 -13 381 43 0 0 chr5 89961149 89961196 -113124336 + (TA)n Simple_repeat Simple_repeat 1 47 0 474 273 109 35 chr5 89961929 89962240 -113123292 - L1ME4a LINE L1 -250 5871 5538 326 95 0 0 chr5 89963673 89963715 -113121817 - 5S rRNA rRNA -79 42 1 22 0 0 0 chr5 89963753 89963775 -113121757 + AT_rich Low_complexity Low_complexity 1 22 0 1455 191 37 0 chr5 89966055 89966327 -113119205 - AluJb SINE Alu -30 282 1 237 317 113 54 chr5 89966374 89966614 -113118918 + L2 LINE L2 583 836 -2478 558 121 36 0 chr5 89967052 89967135 -113118397 + MER63 DNA MER1_type 38 749 -313 1167 88 0 12 chr5 89967264 89967424 -113118108 - AluSq SINE Alu -155 158 1 679 224 0 0 chr5 89967988 89968122 -113117410 - AluJo SINE Alu -178 134 1 374 384 78 16 chr5 89968161 89968546 -113116986 - L2 LINE L2 -665 2649 2241 1576 175 0 41 chr5 89968709 89969001 -113116531 + AluJb SINE Alu 3 282 -30 2434 59 7 0 chr5 89969145 89969451 -113116081 - AluY SINE Alu -3 308 1 203 324 108 0 chr5 89969728 89969802 -113115730 - L2 LINE L2 -8 3264 3183 2123 133 3 0 chr5 89970097 89970406 -113115126 + AluSq SINE Alu 4 313 0 2917 3 0 0 chr5 89971033 89971351 -113114181 + AluYb8 SINE Alu 1 318 0 388 273 20 33 chr5 89972073 89972223 -113113309 + MLT1K LTR MaLR 429 576 -12 4234 210 150 38 chr5 89972519 89973355 -113112177 + L1MC4 LINE L1 6458 7199 -843 2303 84 3 3 chr5 89973355 89973651 -113111881 - AluSq SINE Alu -17 296 1 4234 210 150 38 chr5 89973651 89974237 -113111295 + L1MC4 LINE L1 7199 8040 -2 559 302 101 17 chr5 89975855 89976034 -113109498 - MER91A DNA MER1_type -1 195 2 28 0 0 0 chr5 89976712 89976740 -113108792 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 89976927 89976963 -113108569 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 89977699 89977721 -113107811 + AT_rich Low_complexity Low_complexity 1 22 0 1677 88 13 4 chr5 89977758 89977984 -113107548 + MER30 DNA MER1_type 1 228 -2 33 0 0 0 chr5 89978677 89978710 -113106822 + AT_rich Low_complexity Low_complexity 1 33 0 1563 184 4 0 chr5 89979108 89979374 -113106158 + AluJb SINE Alu 1 267 -45 1955 161 0 0 chr5 89979449 89979759 -113105773 - AluSx SINE Alu -2 310 1 22 0 0 0 chr5 89982598 89982620 -113102912 + AT_rich Low_complexity Low_complexity 1 22 0 670 361 102 29 chr5 89983143 89983972 -113101560 + L2 LINE L2 2003 2892 -422 402 252 113 40 chr5 89984566 89984717 -113100815 + MIR SINE MIR 65 226 -36 352 307 57 21 chr5 89984918 89985058 -113100474 + L2 LINE L2 3150 3294 -19 434 286 261 25 chr5 89985228 89985511 -113100021 - L3 LINE CR1 -2 1575 1226 22 35 0 0 chr5 89986944 89986973 -113098559 + AT_rich Low_complexity Low_complexity 1 29 0 2216 103 0 6 chr5 89988071 89988383 -113097149 - AluSq SINE Alu -3 310 1 2902 107 43 2 chr5 89988728 89989166 -113096366 - L1PA8 LINE L1 -6 6166 5711 239 364 0 0 chr5 89990998 89991097 -113094435 + L2 LINE L2 2804 2902 -411 4052 231 96 61 chr5 89991449 89992466 -113093066 - L1MC4 LINE L1 -13 8029 6940 341 43 21 0 chr5 89992466 89992513 -113093019 + (TG)n Simple_repeat Simple_repeat 2 49 0 4052 231 96 61 chr5 89992513 89993012 -113092520 - L1MC4 LINE L1 -1102 6940 6460 226 250 83 0 chr5 89993217 89993265 -113092267 + L2 LINE L2 3137 3188 -84 249 320 64 41 chr5 89993424 89993596 -113091936 - L2 LINE L2 -1220 2094 1919 1672 177 7 13 chr5 89993645 89993810 -113091722 - AluJo SINE Alu -14 298 134 1953 135 6 10 chr5 89993810 89994121 -113091411 - AluSg SINE Alu 0 310 1 1672 177 7 13 chr5 89994121 89994255 -113091277 - AluJo SINE Alu -178 134 1 2011 132 0 7 chr5 89994773 89995077 -113090455 - AluSx SINE Alu -10 302 1 296 237 122 23 chr5 89995162 89995293 -113090239 - MIR SINE MIR -1 261 118 30 59 0 0 chr5 89995597 89995648 -113089884 + AT_rich Low_complexity Low_complexity 1 51 0 12800 117 50 83 chr5 89995745 89996064 -113089468 - Tigger1 DNA MER2_type 0 2418 2090 886 143 0 0 chr5 89996064 89996190 -113089342 - AluJb SINE Alu -186 126 1 12800 117 50 83 chr5 89996190 89996827 -113088705 - Tigger1 DNA MER2_type -328 2090 1434 2297 84 7 0 chr5 89996827 89997123 -113088409 + AluSq SINE Alu 4 301 -12 12800 117 50 83 chr5 89997123 89997435 -113088097 - Tigger1 DNA MER2_type -984 1434 1113 1920 143 3 7 chr5 89997435 89997728 -113087804 - AluSx SINE Alu -20 292 1 12800 117 50 83 chr5 89997728 89998831 -113086701 - Tigger1 DNA MER2_type -1305 1113 1 444 252 59 8 chr5 89998969 89999088 -113086444 - MIR3 SINE MIR -1 207 83 443 244 18 133 chr5 89999206 89999308 -113086224 + L2 LINE L2 3115 3179 -134 694 228 88 5 chr5 89999308 89999501 -113086031 - MER3 DNA MER1_type 0 209 1 443 244 18 133 chr5 89999501 89999623 -113085909 + L2 LINE L2 3179 3313 0 21 82 0 0 chr5 90000028 90000077 -113085455 + AT_rich Low_complexity Low_complexity 1 49 0 321 239 0 9 chr5 90000168 90000281 -113085251 - L1ME4a LINE L1 -264 5857 5746 821 163 0 0 chr5 90001166 90001295 -113084237 - FLAM_C SINE Alu -2 131 3 212 280 20 0 chr5 90001855 90001905 -113083627 + L2 LINE L2 3214 3264 -8 823 239 70 24 chr5 90002546 90002759 -113082773 - MER58A DNA MER1_type -1 223 1 919 227 0 0 chr5 90003517 90003689 -113081843 + FAM SINE Alu 4 175 0 39 38 0 0 chr5 90003953 90004006 -113081526 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr5 90004769 90004794 -113080738 + AT_rich Low_complexity Low_complexity 1 25 0 2208 105 0 3 chr5 90005861 90006166 -113079366 + AluSx SINE Alu 1 304 -8 616 268 56 0 chr5 90006354 90006496 -113079036 + MIR3 SINE MIR 31 180 -28 401 0 0 20 chr5 90006892 90006942 -113078590 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 856 158 0 0 chr5 90006944 90007071 -113078461 - AluJb SINE Alu -33 279 153 1990 145 0 7 chr5 90007196 90007499 -113078033 + AluSg SINE Alu 1 301 -9 737 182 0 0 chr5 90007499 90007620 -113077912 - AluJo/FLAM SINE Alu -191 121 1 287 233 93 23 chr5 90007620 90007706 -113077826 - L2 LINE L2 -11 3302 3211 1724 187 48 14 chr5 90008105 90008458 -113077074 + MLT1A1 LTR MaLR 1 365 0 233 214 43 29 chr5 90009472 90009542 -113075990 + (CTTAT)n Simple_repeat Simple_repeat 3 73 0 28 61 0 0 chr5 90009571 90009620 -113075912 + AT_rich Low_complexity Low_complexity 1 49 0 2391 82 0 0 chr5 90009909 90010202 -113075330 - AluSx SINE Alu -19 293 1 1964 105 0 0 chr5 90013943 90014201 -113071331 - AluSg SINE Alu -19 291 34 2229 96 0 0 chr5 90014201 90014481 -113071051 - AluSc SINE Alu -29 280 1 2129 100 11 0 chr5 90014654 90014935 -113070597 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr5 90014935 90014990 -113070542 + (TA)n Simple_repeat Simple_repeat 1 55 0 219 167 0 0 chr5 90014990 90015032 -113070500 + (CA)n Simple_repeat Simple_repeat 1 42 0 2374 70 10 13 chr5 90015270 90015582 -113069950 - AluY SINE Alu 0 311 1 3690 258 98 25 chr5 90015744 90016520 -113069012 + L2 LINE L2 1713 2431 -882 5708 98 19 28 chr5 90016520 90016892 -113068640 + L1PA14 LINE L1 5127 5501 -660 2167 99 0 3 chr5 90016892 90017199 -113068333 + AluSg SINE Alu 1 306 0 5708 98 19 28 chr5 90017199 90017866 -113067666 + L1PA14 LINE L1 5501 6158 -3 3690 258 98 25 chr5 90017866 90018518 -113067014 + L2 LINE L2 2431 3244 -69 1143 190 23 18 chr5 90018822 90019043 -113066489 + MER58A DNA MER1_type 1 222 -2 26 50 0 0 chr5 90019949 90019989 -113065543 + AT_rich Low_complexity Low_complexity 1 40 0 26 82 0 0 chr5 90020590 90020651 -113064881 + AT_rich Low_complexity Low_complexity 1 61 0 300 405 84 5 chr5 90023493 90023708 -113061824 + L2 LINE L2 2394 2625 -689 293 412 27 5 chr5 90023734 90023921 -113061611 + L2 LINE L2 2088 2278 -1036 666 308 138 55 chr5 90024024 90024169 -113061363 + L2 LINE L2 2442 2574 -698 2214 88 10 0 chr5 90024169 90024463 -113061069 + AluSp SINE Alu 1 297 -16 666 308 138 55 chr5 90024463 90025055 -113060477 + L2 LINE L2 2574 3229 -43 257 376 120 0 chr5 90025418 90025551 -113059981 + L2 LINE L2 3111 3259 -13 763 270 60 19 chr5 90025918 90026133 -113059399 + MIR SINE MIR 39 262 0 24 32 0 0 chr5 90026353 90026384 -113059148 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 90026600 90026633 -113058899 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 90026808 90026838 -113058694 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 90026907 90026935 -113058597 + AT_rich Low_complexity Low_complexity 1 28 0 309 263 105 53 chr5 90029524 90029714 -113055818 - L2 LINE L2 -67 3246 3047 218 305 63 11 chr5 90080330 90080425 -113005107 + MIR SINE MIR 88 187 -75 358 346 28 22 chr5 90081844 90082026 -113003506 - MER5A DNA MER1_type 0 189 7 421 308 73 49 chr5 90082787 90082876 -113002656 - L2 LINE L2 -441 2873 2788 1637 142 105 119 chr5 90082876 90083233 -113002299 + MSTA LTR MaLR 5 357 -71 2022 108 3 46 chr5 90083233 90083540 -113001992 - AluSx SINE Alu -18 294 1 1637 142 105 119 chr5 90083540 90083612 -113001920 + MSTA LTR MaLR 357 428 0 421 308 73 49 chr5 90083612 90083769 -113001763 - L2 LINE L2 -526 2788 2621 1132 174 5 36 chr5 90084736 90084960 -113000572 - MLT1B LTR MaLR -173 217 1 2434 68 0 0 chr5 90085506 90085801 -112999731 + AluSg SINE Alu 1 295 -15 456 229 0 0 chr5 90086936 90087041 -112998491 - Charlie5 DNA MER1_type 0 2624 2520 1716 73 0 0 chr5 90087115 90087320 -112998212 + AluY SINE Alu 1 205 -106 1748 164 79 55 chr5 90087649 90088028 -112997504 - MLT1B LTR MaLR 0 390 3 2155 125 0 0 chr5 90088148 90088444 -112997088 + AluSq SINE Alu 2 297 -16 2804 89 16 13 chr5 90088444 90088827 -112996705 + L1PA13 LINE L1 5777 6160 -3 250 281 37 49 chr5 90089431 90089513 -112996019 - L2 LINE L2 -4 3309 3229 1565 174 21 11 chr5 90089640 90089927 -112995605 - AluJb SINE Alu -18 294 5 704 297 5 5 chr5 90089999 90090194 -112995338 + L1M3a LINE L1 1 195 -5760 23 0 0 0 chr5 90091341 90091364 -112994168 + AT_rich Low_complexity Low_complexity 1 23 0 613 136 0 0 chr5 90091456 90091537 -112993995 + FLAM_C SINE Alu 36 116 -27 234 0 0 0 chr5 90091543 90091569 -112993963 + (TTG)n Simple_repeat Simple_repeat 1 26 0 190 300 0 0 chr5 90091806 90091846 -112993686 - L2 LINE L2 -25 3288 3249 342 115 0 0 chr5 90092778 90092830 -112992702 + (TG)n Simple_repeat Simple_repeat 2 53 0 1849 166 7 0 chr5 90092830 90093113 -112992419 - AluSx SINE Alu -27 285 1 2728 201 18 45 chr5 90093352 90093925 -112991607 - MER68 LTR ERV1 0 562 6 24 32 0 0 chr5 90094089 90094120 -112991412 + AT_rich Low_complexity Low_complexity 1 31 0 5070 137 31 10 chr5 90094174 90095005 -112990527 + L1MA8 LINE L1 5416 6264 -27 1530 177 87 4 chr5 90095500 90095766 -112989766 - AluJb SINE Alu -24 288 1 302 321 133 46 chr5 90095798 90095994 -112989538 - MIR SINE MIR -48 214 2 1762 177 7 7 chr5 90096311 90096611 -112988921 + AluJb SINE Alu 7 306 -6 1606 193 114 38 chr5 90097201 90097569 -112987963 - MSTD LTR MaLR 0 396 1 329 277 136 27 chr5 90098023 90098207 -112987325 + L1MCc LINE L1 254 457 -5966 1887 279 54 16 chr5 90098438 90099378 -112986154 + L1MCc LINE L1 823 1805 -4897 * 35878 37 6 8 chr5 90099373 90105546 -112979986 + L1PA4 LINE L1 2 6155 0 25 0 0 0 chr5 90105546 90105571 -112979961 + AT_rich Low_complexity Low_complexity 1 25 0 682 249 88 47 chr5 90105571 90105913 -112979619 + L1MCc LINE L1 2003 2358 -4764 510 261 49 7 chr5 90105934 90106076 -112979456 + MLT1G LTR MaLR 443 590 0 305 369 33 33 chr5 90106090 90106334 -112979198 + L2 LINE L2 2638 2881 -433 253 261 120 11 chr5 90107135 90107227 -112978305 + L2 LINE L2 2932 3033 -239 240 375 29 19 chr5 90107241 90107345 -112978187 - L2 LINE L2 -10 3262 3158 203 263 173 38 chr5 90107465 90107598 -112977934 + L2 LINE L2 3162 3312 -1 2372 98 0 3 chr5 90107804 90108110 -112977422 + AluSg SINE Alu 1 305 -5 1709 157 60 3 chr5 90108840 90109159 -112976373 + L1MD2 LINE L1 6014 6350 -9 437 262 45 86 chr5 90109185 90109475 -112976057 - MSTD-int LTR MaLR -7 1364 1087 28 29 0 0 chr5 90109826 90109861 -112975671 + AT_rich Low_complexity Low_complexity 1 35 0 240 31 31 0 chr5 90110529 90110561 -112974971 - MSTD-int LTR MaLR -1325 46 14 801 238 207 94 chr5 90110573 90111095 -112974437 - MLT1H1 LTR MaLR 0 555 15 424 156 37 28 chr5 90111586 90111695 -112973837 - Tigger2 DNA MER2_type -197 2521 2412 453 119 10 139 chr5 90111718 90111819 -112973713 - Tigger2 DNA MER2_type -1880 838 751 239 241 0 0 chr5 90114912 90114966 -112970566 - L2 LINE L2 -3 3310 3257 239 280 86 11 chr5 90115920 90116013 -112969519 + L2 LINE L2 2611 2710 -604 2434 192 5 103 chr5 90117178 90117829 -112967703 + LTR27 LTR ERV1 48 634 -2 2359 100 0 0 chr5 90118276 90118586 -112966946 + AluSp SINE Alu 1 310 -3 23 33 0 0 chr5 90119315 90119345 -112966187 + AT_rich Low_complexity Low_complexity 1 30 0 1459 174 6 22 chr5 90119439 90119750 -112965782 + L1MA10 LINE L1 6027 6332 -2 360 197 79 8 chr5 90119971 90120098 -112965434 - L1ME4a LINE L1 -4 6117 5982 25 31 0 0 chr5 90120313 90120345 -112965187 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 90120756 90120778 -112964754 + AT_rich Low_complexity Low_complexity 1 22 0 192 179 0 0 chr5 90121016 90121055 -112964477 + (ATG)n Simple_repeat Simple_repeat 2 40 0 2673 39 0 0 chr5 90121643 90121950 -112963582 + AluY SINE Alu 1 307 -4 23 54 0 0 chr5 90122730 90122767 -112962765 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr5 90123330 90123368 -112962164 + AT_rich Low_complexity Low_complexity 1 38 0 41828 32 23 9 chr5 90123655 90129723 -112955809 + L1HS LINE L1 3 6154 -1 458 252 15 30 chr5 90130014 90130149 -112955383 + MIR SINE MIR 13 145 -117 2694 33 0 0 chr5 90130940 90131242 -112954290 - AluY SINE Alu -7 304 3 29 60 0 0 chr5 90131348 90131398 -112954134 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 90131796 90131828 -112953704 + AT_rich Low_complexity Low_complexity 1 32 0 1265 140 53 26 chr5 90131983 90132211 -112953321 - MER46A DNA MER2_type -1 235 2 193 311 49 90 chr5 90132305 90132427 -112953105 + MIR3 SINE MIR 52 168 -40 438 204 244 45 chr5 90133889 90134065 -112951467 - MIR SINE MIR -1 261 51 1654 154 33 23 chr5 90135385 90135684 -112949848 + AluJo SINE Alu 1 302 -10 2265 91 82 20 chr5 90135686 90136039 -112949493 - THE1C LTR MaLR 0 375 1 2086 122 7 0 chr5 90136604 90136892 -112948640 - AluSx SINE Alu -20 292 3 301 267 33 22 chr5 90137171 90137261 -112948271 + L2 LINE L2 2994 3084 -188 1330 83 9 48 chr5 90137300 90137529 -112948003 - L1MA9 LINE L1 -2 6310 6091 232 288 12 25 chr5 90137993 90138073 -112947459 + Charlie4 DNA MER1_type 1883 1961 0 343 298 29 88 chr5 90139147 90139419 -112946113 + L2 LINE L2 1177 1432 -1882 214 315 134 39 chr5 90139427 90139554 -112945978 - MIR3 SINE MIR -34 174 36 655 311 129 45 chr5 90140162 90140716 -112944816 + L2 LINE L2 1482 1988 -1326 2270 101 10 3 chr5 90140716 90141023 -112944509 - AluSx SINE Alu -3 309 1 655 311 129 45 chr5 90141023 90141150 -112944382 + L2 LINE L2 1988 2103 -1211 790 181 0 0 chr5 90141150 90141277 -112944255 - FLAM_A SINE Alu -6 127 1 655 311 129 45 chr5 90141277 90141448 -112944084 + L2 LINE L2 2103 2407 -907 228 237 105 70 chr5 90141466 90141580 -112943952 + L2 LINE L2 2577 2694 -620 2762 155 64 39 chr5 90141592 90142153 -112943379 + MER4B LTR ERV1 1 575 -35 710 352 66 40 chr5 90142273 90142696 -112942836 + L2 LINE L2 2836 3269 -3 2356 59 0 3 chr5 90143188 90143478 -112942054 - AluY SINE Alu -9 302 14 1474 199 33 13 chr5 90143615 90143916 -112941616 + MLT1A2 LTR MaLR 57 363 -11 1021 262 238 18 chr5 90144450 90145000 -112940532 + LTR50 LTR ERVL 1 671 -124 775 253 0 6 chr5 90145159 90145337 -112940195 + MIR SINE MIR 49 225 -37 4572 26 0 0 chr5 90145338 90145870 -112939662 + L1PA3 LINE L1 5620 6151 -4 307 94 31 16 chr5 90145884 90145948 -112939584 + L1M LINE L1 5259 5323 -989 29 0 0 0 chr5 90145948 90145977 -112939555 + AT_rich Low_complexity Low_complexity 1 29 0 964 91 23 0 chr5 90146004 90146136 -112939396 + AluSc SINE Alu 163 297 -12 499 265 21 80 chr5 90146987 90147225 -112938307 - L2 LINE L2 -49 3264 3041 2025 98 36 4 chr5 90147668 90147971 -112937561 + AluSx SINE Alu 1 312 0 282 289 16 23 chr5 90149301 90149429 -112936103 + L1ME LINE L1 5698 5824 -297 599 267 52 28 chr5 90150211 90150499 -112935033 + L1MC4a LINE L1 5665 5959 -1849 632 239 128 27 chr5 90150564 90150752 -112934780 + LTR50 LTR ERVL 1 207 -588 2319 100 3 0 chr5 90151196 90151505 -112934027 - AluSx SINE Alu -2 310 1 771 226 77 5 chr5 90151597 90151792 -112933740 - MER3 DNA MER1_type 0 209 1 527 261 208 0 chr5 90152634 90152841 -112932691 - MIR SINE MIR -11 251 2 225 0 0 0 chr5 90154290 90154315 -112931217 + (T)n Simple_repeat Simple_repeat 1 25 0 538 63 13 0 chr5 90156300 90156379 -112929153 - L1MA3 LINE L1 0 6305 6226 988 167 100 12 chr5 90156413 90156664 -112928868 - MER33 DNA MER1_type -51 273 1 638 277 32 29 chr5 90156686 90156904 -112928628 + MIR SINE MIR 32 248 -14 2490 139 21 5 chr5 90156970 90157393 -112928139 + L1PA16 LINE L1 5737 6166 0 1324 104 5 0 chr5 90160356 90160548 -112924984 - L1PB1 LINE L1 0 6151 5959 * 6904 60 63 0 chr5 90160544 90161458 -112924074 - L1PA7 LINE L1 0 6154 5235 1579 139 106 7 chr5 90161587 90161861 -112923671 - AluJo SINE Alu -6 306 6 214 299 78 0 chr5 90161974 90162051 -112923481 + MIR SINE MIR 106 188 -74 1315 174 20 76 chr5 90162453 90162757 -112922775 + AluJo SINE Alu 1 287 -25 22 0 0 0 chr5 90163606 90163628 -112921904 + AT_rich Low_complexity Low_complexity 1 22 0 2248 88 0 20 chr5 90163656 90163951 -112921581 - AluSc SINE Alu -20 289 1 22 0 0 0 chr5 90163953 90163975 -112921557 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 90164007 90164029 -112921503 + AT_rich Low_complexity Low_complexity 1 22 0 410 91 0 15 chr5 90164087 90164153 -112921379 - L1PB1 LINE L1 -15 6136 6072 1705 117 27 90 chr5 90165498 90165899 -112919633 - L1MA8 LINE L1 0 6291 5916 321 179 0 0 chr5 90165899 90165955 -112919577 - MER2 DNA MER2_type -8 337 282 1044 184 15 15 chr5 90165959 90166165 -112919367 + MER2 DNA MER2_type 5 210 -135 3879 136 30 24 chr5 90166241 90166340 -112919192 - L1MA8 LINE L1 -366 5925 5828 11118 95 14 0 chr5 90166340 90168774 -112916758 + L1PA8 LINE L1 3709 6159 -13 3879 136 30 24 chr5 90168774 90169663 -112915869 - L1MA8 LINE L1 -463 5828 4930 2289 103 0 3 chr5 90169785 90170087 -112915445 + AluSq SINE Alu 1 301 -12 2193 126 0 0 chr5 90170123 90170432 -112915100 + AluSg1 SINE Alu 1 309 0 2241 98 0 22 chr5 90171713 90172028 -112913504 - AluSx SINE Alu 0 312 5 220 239 211 0 chr5 90172034 90172105 -112913427 + L2 LINE L2 3228 3313 0 2242 168 17 2 chr5 90172453 90172865 -112912667 - L1P LINE L1 -1277 4869 4452 2079 104 0 42 chr5 90173100 90173407 -112912125 - AluSx SINE Alu -18 294 1 29 70 0 0 chr5 90174183 90174240 -112911292 + AT_rich Low_complexity Low_complexity 1 57 0 730 293 61 11 chr5 90174599 90174879 -112910653 + L1MEc LINE L1 73 366 -6030 396 0 0 0 chr5 90174889 90174933 -112910599 + (CA)n Simple_repeat Simple_repeat 2 45 0 225 0 0 0 chr5 90175849 90175874 -112909658 + (A)n Simple_repeat Simple_repeat 1 25 0 23 33 0 0 chr5 90175886 90175916 -112909616 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr5 90176302 90176334 -112909198 + AT_rich Low_complexity Low_complexity 1 32 0 292 258 93 60 chr5 90176519 90176701 -112908831 + L1MC1 LINE L1 5598 5785 -336 2661 194 52 32 chr5 90176777 90177407 -112908125 + L1PA8A LINE L1 5488 6130 -1 2871 158 28 2 chr5 90177431 90177938 -112907594 + L1MC1 LINE L1 5814 6333 0 2268 111 0 7 chr5 90180165 90180471 -112905061 - AluSq SINE Alu -9 304 1 1535 107 4 22 chr5 90180511 90180736 -112904796 - AluSq SINE Alu -90 223 3 1039 287 237 48 chr5 90180888 90181644 -112903888 + L3 LINE CR1 679 1577 0 759 316 114 28 chr5 90182783 90183248 -112902284 + MLT1J LTR MaLR 5 509 -2 263 297 276 10 chr5 90183614 90183806 -112901726 + L2 LINE L2 2269 2511 -803 233 212 30 0 chr5 90184463 90184529 -112901003 + GA-rich Low_complexity Low_complexity 2 69 0 8294 163 56 12 chr5 90184798 90184993 -112900539 + L1MC1 LINE L1 20 205 -6221 207 0 0 0 chr5 90184993 90185016 -112900516 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8294 163 56 12 chr5 90185016 90186601 -112898931 + L1MC1 LINE L1 205 1996 -4430 2083 139 3 0 chr5 90186601 90186903 -112898629 - AluSx SINE Alu -7 305 3 8294 163 56 12 chr5 90186903 90187352 -112898180 + L1MC1 LINE L1 1996 2424 -4002 1823 233 25 54 chr5 90187352 90187900 -112897632 + MLT2B3 LTR ERVL 1 480 -35 41 36 0 0 chr5 90187900 90187955 -112897577 + AT_rich Low_complexity Low_complexity 1 55 0 255 129 16 81 chr5 90187955 90188017 -112897515 + MLT2B3 LTR ERVL 462 519 -1 11143 214 47 10 chr5 90188017 90188833 -112896699 + L1MC1 LINE L1 2419 3203 -3410 2123 135 0 0 chr5 90188833 90189136 -112896396 + AluSx SINE Alu 1 303 -9 11143 214 47 10 chr5 90189136 90192099 -112893433 + L1MC1 LINE L1 3203 6333 -280 2469 133 7 31 chr5 90192099 90192512 -112893020 + MSTA-int LTR MaLR 1249 1651 0 1824 120 191 22 chr5 90192512 90192878 -112892654 + MSTA LTR MaLR 1 428 0 1004 184 88 40 chr5 90192878 90193150 -112892382 + L1MC1 LINE L1 6329 6613 0 2361 113 0 0 chr5 90194170 90194502 -112891030 + AluSg SINE Alu 1 332 0 21562 181 72 9 chr5 90194513 90200508 -112885024 + L1MA3 LINE L1 15 6570 -1154 2211 114 3 3 chr5 90200508 90200816 -112884716 + AluSc SINE Alu 1 308 -1 21562 181 72 9 chr5 90200816 90202049 -112883483 + L1MA3 LINE L1 6570 7724 0 1342 185 24 100 chr5 90202276 90202605 -112882927 + AluJo SINE Alu 1 304 -8 2122 50 0 0 chr5 90202937 90203199 -112882333 - L1PA5 LINE L1 -4 6150 5889 263 330 78 10 chr5 90204405 90204508 -112881024 + L2 LINE L2 3154 3263 -9 22 0 0 0 chr5 90204678 90204700 -112880832 + AT_rich Low_complexity Low_complexity 1 22 0 2133 117 14 0 chr5 90206113 90206404 -112879128 + AluSx SINE Alu 1 295 -17 197 175 0 75 chr5 90206507 90206522 -112879010 - L2 LINE L2 -20 3252 3237 14021 130 43 9 chr5 90206522 90207435 -112878097 - Tigger1 DNA MER2_type 0 2418 1537 1516 171 55 17 chr5 90207435 90207728 -112877804 - AluJb SINE Alu -8 304 1 14021 130 43 9 chr5 90207728 90209153 -112876379 - Tigger1 DNA MER2_type -881 1537 1 197 175 0 75 chr5 90209153 90209177 -112876355 - L2 LINE L2 -35 3237 3216 348 279 101 0 chr5 90209338 90209467 -112876065 + MER103 DNA DNA 24 165 -1 22 0 0 0 chr5 90209646 90209668 -112875864 + AT_rich Low_complexity Low_complexity 1 22 0 2026 91 4 4 chr5 90209673 90209947 -112875585 + AluSc SINE Alu 1 274 -35 252 0 0 0 chr5 90209952 90209980 -112875552 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 24 67 0 0 chr5 90210769 90210814 -112874718 + AT_rich Low_complexity Low_complexity 1 45 0 228 394 0 16 chr5 90210917 90211044 -112874488 + 7SLRNA srpRNA srpRNA 54 178 -142 853 20 0 0 chr5 90211053 90211152 -112874380 + L1PA3 LINE L1 6054 6152 -3 189 229 0 0 chr5 90212013 90212061 -112873471 + (CA)n Simple_repeat Simple_repeat 1 48 0 2228 109 3 0 chr5 90212100 90212404 -112873128 + AluSg SINE Alu 1 305 -5 340 318 45 0 chr5 90212408 90212562 -112872970 + MER103 DNA DNA 3 163 -3 4121 129 32 5 chr5 90213405 90214069 -112871463 + L1PA16 LINE L1 5472 6153 -13 184 253 84 48 chr5 90214086 90214169 -112871363 + L2 LINE L2 640 725 -2589 2060 160 93 38 chr5 90214803 90215246 -112870286 + MLT1C LTR MaLR 1 467 0 192 241 287 11 chr5 90215300 90215387 -112870145 + MIR SINE MIR 28 138 -70 192 211 99 70 chr5 90215379 90215450 -112870082 + MIR SINE MIR 150 222 -40 251 337 76 0 chr5 90215739 90215831 -112869701 - L2 LINE L2 -36 3236 3138 23 0 0 0 chr5 90217484 90217507 -112868025 + AT_rich Low_complexity Low_complexity 1 23 0 814 269 9 28 chr5 90219337 90219549 -112865983 + MIR SINE MIR 7 214 -48 1793 257 100 97 chr5 90219945 90220031 -112865501 + HAL1 LINE L1 1 85 -2422 1902 140 29 13 chr5 90220031 90220338 -112865194 - AluJb SINE Alu 0 312 1 1793 257 100 97 chr5 90220338 90221072 -112864460 + HAL1 LINE L1 85 815 -1692 201 74 0 0 chr5 90221072 90221099 -112864433 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1793 257 100 97 chr5 90221099 90221220 -112864312 + HAL1 LINE L1 815 934 -1573 6938 51 35 0 chr5 90221220 90222161 -112863371 - L1PA7 LINE L1 -2 6152 5198 1793 257 100 97 chr5 90222161 90222572 -112862960 + HAL1 LINE L1 934 1359 -1148 * 1821 248 92 62 chr5 90222567 90223083 -112862449 + HAL1 LINE L1 1685 2235 -272 1908 153 3 10 chr5 90223083 90223397 -112862135 + AluJo SINE Alu 1 312 0 1821 248 92 62 chr5 90223397 90223673 -112861859 + HAL1 LINE L1 2235 2501 -6 22 35 0 0 chr5 90223689 90223718 -112861814 + AT_rich Low_complexity Low_complexity 1 29 0 1713 226 60 29 chr5 90224391 90224837 -112860695 + LTR40c LTR ERVL 1 460 -5 2437 200 21 27 chr5 90226877 90227437 -112858095 - MER74A LTR ERVL -1 557 1 261 0 0 0 chr5 90228911 90228940 -112856592 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 219 259 0 0 chr5 90229360 90229414 -112856118 - L2 LINE L2 -3 3269 3216 339 352 55 0 chr5 90229927 90230072 -112855460 + MIR SINE MIR 77 229 -33 21 57 0 0 chr5 90231417 90231452 -112854080 + AT_rich Low_complexity Low_complexity 1 35 0 464 311 53 1 chr5 90231452 90231673 -112853859 - L1M4 LINE L1 -1488 4658 4427 255 247 0 0 chr5 90231921 90231998 -112853534 + L1ME3 LINE L1 4959 5035 -1111 570 231 367 14 chr5 90232269 90232555 -112852977 - L2 LINE L2 -1 3312 2926 533 317 88 43 chr5 90232564 90233004 -112852528 + L1ME3 LINE L1 5374 5838 -324 335 166 33 171 chr5 90233064 90233245 -112852287 + L1MC5 LINE L1 7756 7911 -50 27 0 0 0 chr5 90233304 90233331 -112852201 + AT_rich Low_complexity Low_complexity 1 27 0 193 306 88 27 chr5 90233682 90233829 -112851703 - MIR3 SINE MIR -49 159 4 503 294 43 20 chr5 90234382 90234562 -112850970 + MIR SINE MIR 3 187 -66 2303 89 3 0 chr5 90234580 90234873 -112850659 + AluSp SINE Alu 1 294 -19 403 319 261 2 chr5 90235033 90235487 -112850045 - L2 LINE L2 0 3313 2747 346 336 40 13 chr5 90235764 90235945 -112849587 + MIR SINE MIR 17 197 -65 900 126 69 0 chr5 90236269 90236444 -112849088 + L1MA7 LINE L1 6102 6288 -3 198 103 0 0 chr5 90236802 90236831 -112848701 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 90237038 90237059 -112848473 + AT_rich Low_complexity Low_complexity 1 21 0 277 167 50 0 chr5 90237059 90237119 -112848413 - L1MA7 LINE L1 -3 6288 6226 200 246 0 43 chr5 90237175 90237244 -112848288 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 2195 103 0 0 chr5 90237545 90237835 -112847697 - AluSx SINE Alu -20 292 3 920 92 8 0 chr5 90238236 90238378 -112847154 - L1MB2 LINE L1 -28 6143 6015 266 286 107 9 chr5 90238393 90238505 -112847027 + MIR SINE MIR 49 171 -91 42 48 0 0 chr5 90239118 90239181 -112846351 + AT_rich Low_complexity Low_complexity 1 63 0 2469 68 0 0 chr5 90242002 90242311 -112843221 + AluY SINE Alu 1 309 -2 40 31 0 15 chr5 90242623 90242654 -112842878 + AT_rich Low_complexity Low_complexity 1 31 -33 1947 136 29 35 chr5 90242654 90243000 -112842532 + MER2 DNA MER2_type 1 344 0 40 31 0 15 chr5 90243000 90243033 -112842499 + AT_rich Low_complexity Low_complexity 31 64 0 360 0 0 0 chr5 90243453 90243493 -112842039 + (CA)n Simple_repeat Simple_repeat 2 41 0 278 221 0 29 chr5 90243612 90243680 -112841852 + L2 LINE L2 3207 3272 0 2445 61 0 16 chr5 90244800 90245110 -112840422 + AluY SINE Alu 1 305 -6 927 171 156 15 chr5 90245418 90245617 -112839915 + L1ME3A LINE L1 5933 6159 -11 245 301 145 0 chr5 90245645 90245728 -112839804 + MIR SINE MIR 37 131 -131 333 316 202 23 chr5 90245739 90246170 -112839362 + L2 LINE L2 2232 2739 -575 2332 104 3 0 chr5 90246185 90246493 -112839039 + AluSx SINE Alu 4 312 0 270 355 82 89 chr5 90246546 90246960 -112838572 + L2 LINE L2 2860 3270 -2 540 272 99 0 chr5 90248343 90248505 -112837027 + MIR SINE MIR 10 187 -75 1812 151 3 0 chr5 90248517 90248815 -112836717 + L1MB3 LINE L1 5884 6182 -1 217 373 90 17 chr5 90249263 90249440 -112836092 + MIR SINE MIR 2 191 -71 454 278 57 42 chr5 90249743 90249891 -112835641 - L2 LINE L2 0 3313 3160 2099 109 0 14 chr5 90249891 90250184 -112835348 + AluSx SINE Alu 1 289 -23 454 278 57 42 chr5 90250184 90250247 -112835285 - L2 LINE L2 -153 3160 3099 461 291 118 26 chr5 90250593 90250864 -112834668 + L2 LINE L2 2956 3251 -62 698 297 125 20 chr5 90250914 90251321 -112834211 + MLT1L LTR MaLR 151 600 -15 195 237 93 31 chr5 90251334 90251431 -112834101 + MIR SINE MIR 117 219 -43 22 56 0 0 chr5 90252193 90252229 -112833303 + AT_rich Low_complexity Low_complexity 1 36 0 566 342 17 13 chr5 90254571 90254808 -112830724 + MIR SINE MIR 25 262 0 252 305 81 29 chr5 90254951 90255125 -112830407 - L2 LINE L2 -12 3301 3119 204 40 0 0 chr5 90256592 90256617 -112828915 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 352 317 101 56 chr5 90257055 90257361 -112828171 + L1M2 LINE L1 646 965 -5884 439 268 132 98 chr5 90257376 90257526 -112828006 + L1M2 LINE L1 441 584 -6265 249 57 0 0 chr5 90257526 90257561 -112827971 + (CCCCAG)n Simple_repeat Simple_repeat 6 40 0 439 268 132 98 chr5 90257561 90258176 -112827356 + L1M2 LINE L1 584 1251 -5598 298 194 11 11 chr5 90258570 90258663 -112826869 + CT-rich Low_complexity Low_complexity 2 94 0 25 75 0 0 chr5 90259129 90259182 -112826350 + GC_rich Low_complexity Low_complexity 1 53 0 313 247 34 34 chr5 90260881 90260970 -112824562 + MER5B DNA MER1_type 80 168 -10 22 0 0 0 chr5 90261350 90261372 -112824160 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr5 90262416 90262462 -112823070 + AT_rich Low_complexity Low_complexity 1 46 0 267 194 47 31 chr5 90264982 90265111 -112820421 + (TA)n Simple_repeat Simple_repeat 1 131 0 400 173 16 1 chr5 90265149 90265392 -112820140 + AluJo SINE Alu 1 279 -33 346 154 26 0 chr5 90265393 90265471 -112820061 + GA-rich Low_complexity Low_complexity 1 80 0 286 186 68 0 chr5 90265471 90265530 -112820002 - MER116 DNA Mariner -14 66 4 263 250 107 0 chr5 90265586 90265670 -112819862 - MIR SINE MIR -6 256 164 1618 181 26 20 chr5 90265670 90265973 -112819559 + AluJb SINE Alu 1 305 -7 2164 114 14 0 chr5 90266463 90266753 -112818779 + AluSc SINE Alu 1 294 -15 731 285 78 60 chr5 90268024 90268410 -112817122 + L2 LINE L2 2921 3313 0 225 203 51 25 chr5 90268762 90268841 -112816691 + L2 LINE L2 2677 2757 -557 209 318 0 0 chr5 90268930 90268974 -112816558 + L2 LINE L2 3132 3175 -97 722 268 78 5 chr5 90269150 90269355 -112816177 + MIR SINE MIR 33 252 -10 309 139 0 0 chr5 90269517 90269560 -112815972 - 5S rRNA rRNA -78 43 1 304 260 286 21 chr5 90269871 90270063 -112815469 - L3b LINE CR1 -140 1443 1201 235 235 39 0 chr5 90270308 90270359 -112815173 - L2 LINE L2 -2 3270 3218 553 308 115 67 chr5 90270441 90271121 -112814411 - L2 LINE L2 -13 3259 2550 229 224 12 35 chr5 90271453 90271538 -112813994 + A-rich Low_complexity Low_complexity 2 84 0 699 314 81 9 chr5 90271657 90271979 -112813553 - LTR16A LTR ERVL -7 443 99 2546 59 3 0 chr5 90272663 90272969 -112812563 - AluY SINE Alu -4 307 1 23 54 0 0 chr5 90273817 90273854 -112811678 + AT_rich Low_complexity Low_complexity 1 37 0 595 287 57 109 chr5 90274030 90274361 -112811171 - LTR67 LTR ERVL -227 330 17 1956 155 0 0 chr5 90275915 90276243 -112809289 - AluJb SINE Alu 0 328 1 1939 126 0 21 chr5 90277122 90277407 -112808125 + AluSx SINE Alu 1 279 -33 26 0 0 0 chr5 90277537 90277563 -112807969 + AT_rich Low_complexity Low_complexity 1 26 0 407 321 36 14 chr5 90277576 90277716 -112807816 - MIR3 SINE MIR -63 145 3 522 281 6 6 chr5 90277979 90278143 -112807389 - MER103 DNA DNA 0 166 3 403 233 121 35 chr5 90278787 90278903 -112806629 + MER94 DNA DNA 6 131 -3 247 278 123 112 chr5 90279088 90279545 -112805987 - L2 LINE L2 -7 3265 2804 1352 171 65 154 chr5 90279794 90280345 -112805187 - MLT1D LTR MaLR -1 504 3 441 311 26 26 chr5 90281049 90281200 -112804332 + MIR3 SINE MIR 33 183 -25 181 357 12 12 chr5 90281666 90281750 -112803782 - L2 LINE L2 -615 2699 2616 478 271 50 44 chr5 90282914 90283095 -112802437 - MIR SINE MIR -12 250 69 200 29 0 59 chr5 90283340 90283374 -112802158 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 302 333 116 26 chr5 90284154 90284343 -112801189 - MIR SINE MIR -56 206 1 581 298 75 16 chr5 90285377 90285565 -112799967 + MIR SINE MIR 56 254 -8 2245 119 3 0 chr5 90287535 90287847 -112797685 + AluSq SINE Alu 1 313 0 332 269 67 17 chr5 90288134 90288253 -112797279 + L1ME4a LINE L1 5940 6064 -57 1061 227 25 11 chr5 90288294 90288580 -112796952 + L1M4 LINE L1 4359 4648 -1498 7799 123 23 29 chr5 90288583 90288991 -112796541 - Tigger3b DNA MER2_type -1797 1231 822 2481 76 0 3 chr5 90288991 90289294 -112796238 - AluSx SINE Alu -10 302 1 7799 123 23 29 chr5 90289294 90289503 -112796029 - Tigger3b DNA MER2_type -2206 822 613 1699 147 0 74 chr5 90289503 90289815 -112795717 + AluSx SINE Alu 1 289 -23 7799 123 23 29 chr5 90289815 90290435 -112795097 - Tigger3b DNA MER2_type -2415 613 1 253 274 55 16 chr5 90292110 90292218 -112793314 + MIR SINE MIR 38 149 -62 657 250 114 26 chr5 90293144 90293372 -112792160 + MIR SINE MIR 8 255 -7 2369 166 11 3 chr5 90293535 90293897 -112791635 - MLT1A1 LTR MaLR 0 365 1 210 192 19 19 chr5 90295616 90295668 -112789864 + CT-rich Low_complexity Low_complexity 4 55 0 2321 106 0 0 chr5 90296113 90296424 -112789108 - AluY SINE Alu 0 311 1 228 330 10 40 chr5 90296483 90296583 -112788949 - MIR SINE MIR -73 135 39 2307 110 7 0 chr5 90296882 90297192 -112788340 + AluSx SINE Alu 1 312 0 2369 76 0 0 chr5 90297200 90297488 -112788044 + AluSc SINE Alu 1 288 -21 181 293 86 0 chr5 90298610 90298668 -112786864 + L2 LINE L2 3251 3313 0 1419 63 0 0 chr5 90299314 90299488 -112786044 + AluY SINE Alu 136 309 -2 189 256 0 0 chr5 90299575 90299614 -112785918 - MIR SINE MIR -176 86 48 560 308 68 25 chr5 90300036 90300279 -112785253 + MIR SINE MIR 8 259 -3 21 0 0 0 chr5 90300574 90300595 -112784937 + AT_rich Low_complexity Low_complexity 1 21 0 551 284 92 67 chr5 90300983 90301571 -112783961 + L2 LINE L2 2682 3272 0 2157 95 0 16 chr5 90304409 90304713 -112780819 - AluSx SINE Alu -13 299 1 239 182 11 0 chr5 90305183 90305232 -112780300 - MIR SINE MIR -46 162 111 264 59 0 0 chr5 90305846 90305880 -112779652 + (TG)n Simple_repeat Simple_repeat 1 34 0 423 0 0 0 chr5 90305900 90305947 -112779585 + (CA)n Simple_repeat Simple_repeat 1 47 0 189 336 42 49 chr5 90306025 90306168 -112779364 - L2 LINE L2 -450 2864 2723 214 347 69 0 chr5 90306228 90306300 -112779232 + L2 LINE L2 3186 3262 -10 231 88 0 0 chr5 90306304 90306338 -112779194 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 567 336 47 0 chr5 90306607 90306821 -112778711 - L2 LINE L2 -232 3081 2858 325 298 87 33 chr5 90307891 90308133 -112777399 - MER112 DNA MER1_type -5 255 1 200 260 40 0 chr5 90308462 90308512 -112777020 + MIR3 SINE MIR 108 159 -49 1975 160 0 6 chr5 90309016 90309329 -112776203 - AluSx SINE Alu -1 311 1 244 191 9 45 chr5 90309447 90309557 -112775975 + (TAAA)n Simple_repeat Simple_repeat 4 109 0 1838 204 25 27 chr5 90309823 90309855 -112775677 - MLT2D LTR ERVL -8 406 375 360 119 0 0 chr5 90309855 90309914 -112775618 + (TG)n Simple_repeat Simple_repeat 1 59 0 1838 204 25 27 chr5 90309914 90310288 -112775244 - MLT2D LTR ERVL -39 375 1 6143 232 33 13 chr5 90310300 90312108 -112773424 + L1M2c LINE L1 71 1748 -5101 395 148 0 34 chr5 90312140 90312228 -112773304 - L1M2c LINE L1 -5010 1779 1695 2744 214 31 28 chr5 90312230 90313034 -112772498 + L1M2c LINE L1 2627 3440 -3408 331 276 0 0 chr5 90313443 90313519 -112772013 + MIR SINE MIR 76 151 -111 4948 112 14 21 chr5 90313595 90314360 -112771172 + L1MA5A LINE L1 5538 6297 0 2058 116 0 10 chr5 90314523 90314815 -112770717 + AluSx SINE Alu 5 293 -19 1182 179 64 103 chr5 90314917 90314958 -112770574 - Charlie1 DNA MER1_type 0 2761 2720 2369 77 20 0 chr5 90314958 90315255 -112770277 - AluY SINE Alu -8 303 1 1182 179 64 103 chr5 90315255 90315393 -112770139 - Charlie1 DNA MER1_type -41 2720 2578 240 35 0 0 chr5 90315393 90315422 -112770110 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1746 135 62 0 chr5 90315426 90315685 -112769847 - AluSx SINE Alu -37 275 1 1182 179 64 103 chr5 90315685 90315935 -112769597 - Charlie1 DNA MER1_type -186 2575 2343 184 87 0 0 chr5 90315952 90315975 -112769557 - MER5A DNA MER1_type -166 23 1 335 291 35 3 chr5 90315995 90316112 -112769420 + MIR SINE MIR 32 133 -75 267 250 135 19 chr5 90316106 90316210 -112769322 - MIR SINE MIR -3 259 144 * 2425 93 0 0 chr5 90316324 90316634 -112768898 - AluSx SINE Alu -2 310 1 608 234 78 0 chr5 90317096 90317224 -112768308 + MER63A DNA MER1_type 48 185 -25 277 207 85 24 chr5 90317335 90317417 -112768115 + MIR SINE MIR 175 261 -1 225 132 26 0 chr5 90317701 90317739 -112767793 + L1ME LINE L1 5615 5653 -468 367 237 18 9 chr5 90317758 90317872 -112767660 + L1ME LINE L1 5705 5819 -302 231 230 40 27 chr5 90318528 90318602 -112766930 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 465 297 109 16 chr5 90318917 90319109 -112766423 + MIR SINE MIR 53 262 0 2914 195 22 2 chr5 90322044 90322577 -112762955 + L1MDa LINE L1 18 561 -5979 553 178 16 70 chr5 90322592 90322638 -112762894 + L1MD1 LINE L1 6121 6168 -74 2182 110 3 0 chr5 90322638 90322930 -112762602 + AluSq SINE Alu 1 293 -20 553 178 16 70 chr5 90322930 90323012 -112762520 + L1MD1 LINE L1 6168 6242 0 747 227 161 91 chr5 90323115 90323550 -112761982 - MLT1D LTR MaLR -2 465 1 944 275 90 53 chr5 90323655 90323899 -112761633 - L2 LINE L2 -7 3306 3073 1759 161 3 10 chr5 90323899 90324191 -112761341 - AluJo SINE Alu -19 293 4 944 275 90 53 chr5 90324191 90324401 -112761131 - L2 LINE L2 -240 3073 2835 1616 153 233 20 chr5 90324690 90325042 -112760490 + MSTA LTR MaLR 2 428 0 619 304 95 25 chr5 90325175 90325543 -112759989 - L1MC/D LINE L1 -2159 5649 5256 581 251 111 66 chr5 90325590 90325983 -112759549 - LTR67 LTR ERVL -11 546 105 554 232 27 9 chr5 90327409 90327546 -112757986 + MIR SINE MIR 6 149 -63 1172 111 0 0 chr5 90327549 90327702 -112757830 + AluJb SINE Alu 22 174 -138 2873 91 3 0 chr5 90327702 90328085 -112757447 - pTR5 LTR ERV1 -2047 391 8 602 167 0 65 chr5 90328095 90328263 -112757269 - pTR5 LTR ERV1 -1450 988 832 1007 122 0 0 chr5 90328275 90328406 -112757126 + AluJb SINE Alu 169 299 -13 659 132 0 0 chr5 90328445 90328536 -112756996 - AluSc SINE Alu -15 294 204 4411 138 44 24 chr5 90328536 90329483 -112756049 + pTR5 LTR ERV1 743 2025 -413 278 286 10 0 chr5 90329483 90329581 -112755951 + LTR30 LTR ERV1 544 642 -80 1503 104 5 5 chr5 90329584 90329805 -112755727 + pTR5 LTR ERV1 172 392 -2046 567 139 35 0 chr5 90329805 90329891 -112755641 - AluSp SINE Alu -104 209 121 821 143 15 15 chr5 90329892 90330025 -112755507 - AluJo/FLAM SINE Alu -169 133 1 242 192 0 0 chr5 90330025 90330077 -112755455 + MIR SINE MIR 168 219 -43 1619 117 0 0 chr5 90330696 90330919 -112754613 + L1PA14 LINE L1 5939 6161 0 613 280 71 0 chr5 90331038 90331206 -112754326 - MIR SINE MIR -65 197 18 198 0 0 0 chr5 90332069 90332091 -112753441 + (A)n Simple_repeat Simple_repeat 1 22 0 1936 97 40 37 chr5 90332096 90332394 -112753138 + AluSx SINE Alu 1 299 -13 2407 136 86 5 chr5 90333014 90333411 -112752121 + MSTB1 LTR MaLR 3 431 -1 287 59 0 0 chr5 90333444 90333478 -112752054 + U2 snRNA snRNA 1 34 -154 3832 145 12 44 chr5 90333688 90334035 -112751497 + L1MB1 LINE L1 5515 5831 -337 2126 203 59 65 chr5 90334035 90334592 -112750940 + MLT2B3 LTR ERVL 1 554 0 3832 145 12 44 chr5 90334592 90334919 -112750613 + L1MB1 LINE L1 5831 6167 -1 1167 284 40 28 chr5 90335007 90335429 -112750103 - LTR16A LTR ERVL -6 444 18 1120 174 35 63 chr5 90335883 90336273 -112749259 - MLT2B1 LTR ERVL -35 485 19 825 203 62 17 chr5 90336556 90336733 -112748799 - MER5A DNA MER1_type 0 189 5 228 200 40 0 chr5 90337050 90337100 -112748432 + MLT1K LTR MaLR 69 120 -468 354 159 16 0 chr5 90337533 90337596 -112747936 + MLT1K LTR MaLR 523 586 -2 226 220 46 101 chr5 90338460 90338569 -112746963 + MIR SINE MIR 30 132 -76 296 162 0 15 chr5 90338975 90339043 -112746489 + GA-rich Low_complexity Low_complexity 2 68 0 833 220 55 25 chr5 90341871 90342107 -112743425 - MIR SINE MIR -1 261 19 824 192 23 17 chr5 90342109 90342281 -112743251 - MER5B DNA MER1_type -3 175 3 2683 214 36 9 chr5 90342404 90342956 -112742576 + MLT1F1 LTR MaLR 1 567 0 345 259 115 36 chr5 90343479 90343618 -112741914 + MIR SINE MIR 4 153 -109 810 279 76 22 chr5 90344075 90344390 -112741142 + MER102b DNA MER1_type 2 333 -8 2756 142 16 4 chr5 90344857 90345308 -112740224 - L1MB3 LINE L1 -3 6180 5725 945 152 5 27 chr5 90345336 90345520 -112740012 - L1MB3 LINE L1 -437 5746 5567 291 230 0 27 chr5 90345524 90345598 -112739934 - L1ME2 LINE L1 -20 6144 6073 666 321 89 14 chr5 90346055 90346404 -112739128 + L1ME4a LINE L1 5417 5791 -2017 319 310 54 49 chr5 90347321 90347505 -112738027 + L1ME4a LINE L1 5840 6024 -97 1133 211 92 35 chr5 90347573 90347833 -112737699 + AluJo SINE Alu 1 275 -37 222 270 0 0 chr5 90347888 90347962 -112737570 + GA-rich Low_complexity Low_complexity 4 77 0 219 325 44 70 chr5 90348126 90348240 -112737292 - L2 LINE L2 -13 3259 3149 352 252 160 46 chr5 90348568 90348699 -112736833 - MIR SINE MIR -99 163 18 1508 138 243 25 chr5 90349221 90349546 -112735986 + MSTD LTR MaLR 1 396 0 270 0 0 0 chr5 90355336 90355366 -112730166 + (T)n Simple_repeat Simple_repeat 1 30 0 204 324 0 35 chr5 90355424 90355566 -112729966 + G-rich Low_complexity Low_complexity 3 139 0 384 22 0 0 chr5 90356775 90356820 -112728712 + (CA)n Simple_repeat Simple_repeat 1 45 0 201 129 0 0 chr5 90358714 90358745 -112726787 + (TG)n Simple_repeat Simple_repeat 2 32 0 374 264 7 79 chr5 90361592 90361732 -112723800 + MER5A DNA MER1_type 58 187 -2 395 255 61 0 chr5 90362002 90362100 -112723432 - MIR SINE MIR -114 148 45 196 230 0 6 chr5 90362126 90362167 -112723365 + L2 LINE L2 3218 3299 -14 2395 100 0 0 chr5 90362266 90362567 -112722965 - AluSx SINE Alu -11 301 1 521 301 77 65 chr5 90362974 90363310 -112722222 + L2 LINE L2 2932 3271 -1 1078 47 78 0 chr5 90363351 90363480 -112722052 - MER85 DNA T2_type 0 139 1 448 334 51 68 chr5 90364151 90364404 -112721128 + L2 LINE L2 2909 3153 -119 2162 95 7 7 chr5 90364404 90364699 -112720833 - AluSc SINE Alu -14 295 1 448 334 51 68 chr5 90364699 90364813 -112720719 + L2 LINE L2 3153 3267 -5 305 277 48 0 chr5 90364945 90365028 -112720504 - L2 LINE L2 -18 3254 3168 388 287 60 42 chr5 90365119 90365286 -112720246 - MIR SINE MIR -16 246 77 253 354 67 11 chr5 90365378 90365556 -112719976 + L2 LINE L2 827 1014 -2300 280 242 15 0 chr5 90365669 90365735 -112719797 + MIR SINE MIR 162 228 -34 738 253 86 83 chr5 90366079 90366187 -112719345 + MLT1K LTR MaLR 185 291 -297 2442 86 0 0 chr5 90366187 90366491 -112719041 + AluSq SINE Alu 1 304 -9 738 253 86 83 chr5 90366491 90366730 -112718802 + MLT1K LTR MaLR 291 533 -55 425 323 167 34 chr5 90366988 90367629 -112717903 + L2 LINE L2 1759 2484 -830 360 254 113 73 chr5 90367676 90367853 -112717679 + MLT1L LTR MaLR 1 184 -431 405 0 0 0 chr5 90368195 90368240 -112717292 + (CA)n Simple_repeat Simple_repeat 2 46 0 1584 241 66 74 chr5 90368750 90369388 -112716144 - L1MC4 LINE L1 -46 7996 7364 288 363 0 0 chr5 90369767 90369858 -112715674 + MIR3 SINE MIR 87 177 -31 282 312 136 40 chr5 90369974 90370099 -112715433 - L3 LINE CR1 0 1577 1441 2473 70 0 16 chr5 90371062 90371376 -112714156 + AluSc SINE Alu 1 309 0 292 273 133 81 chr5 90371417 90371583 -112713949 - MIR3 SINE MIR -9 199 20 300 294 138 0 chr5 90373210 90373319 -112712213 - L2 LINE L2 0 3313 3190 385 373 25 6 chr5 90373663 90373821 -112711711 + MIR SINE MIR 51 211 -51 332 261 100 119 chr5 90374199 90374609 -112710923 - MLT1J LTR MaLR 0 511 110 233 329 14 0 chr5 90374552 90374622 -112710910 - LTR67 LTR ERVL -386 171 101 * 292 248 19 29 chr5 90375953 90376058 -112709474 + CT-rich Low_complexity Low_complexity 1 104 0 1850 161 3 7 chr5 90376249 90376559 -112708973 - AluJb SINE Alu 0 312 4 838 237 12 0 chr5 90376919 90377088 -112708444 - MER5B DNA MER1_type -7 171 1 1847 204 8 124 chr5 90377247 90377397 -112708135 - MLT2B1 LTR ERVL -2 513 347 2242 99 0 26 chr5 90377397 90377700 -112707832 + AluSc SINE Alu 2 296 -13 1847 204 8 124 chr5 90377700 90378140 -112707392 - MLT2B1 LTR ERVL -168 347 1 2273 102 3 0 chr5 90379592 90379887 -112705645 + AluSx SINE Alu 2 297 -15 208 189 0 0 chr5 90380271 90380284 -112705248 + GA-rich Low_complexity Low_complexity 4 16 -24 1893 168 0 13 chr5 90380284 90380594 -112704938 + AluJb SINE Alu 1 306 -6 208 189 0 0 chr5 90380594 90380617 -112704915 + GA-rich Low_complexity Low_complexity 15 40 0 181 404 53 0 chr5 90380752 90380866 -112704666 - L2 LINE L2 -5 3267 3148 533 259 25 6 chr5 90380884 90381042 -112704490 - LTR33 LTR ERVL -1 520 360 938 242 29 47 chr5 90381076 90381353 -112704179 - LTR33 LTR ERVL -240 281 10 211 350 119 12 chr5 90381418 90381578 -112703954 - L2 LINE L2 -245 3027 2851 489 237 85 23 chr5 90381646 90381823 -112703709 - MLT1J LTR MaLR 0 511 324 872 275 26 13 chr5 90381863 90382092 -112703440 - MLT1J LTR MaLR -279 232 1 210 37 0 0 chr5 90383082 90383109 -112702423 + (TCCA)n Simple_repeat Simple_repeat 4 30 0 363 349 103 16 chr5 90383430 90383833 -112701699 - L2 LINE L2 -182 3090 2657 1099 246 107 17 chr5 90383854 90384200 -112701332 - L2 LINE L2 -5 3308 2932 252 331 130 63 chr5 90385514 90385813 -112699719 - L2 LINE L2 -14 3258 2940 29 47 0 0 chr5 90387356 90387399 -112698133 + AT_rich Low_complexity Low_complexity 1 43 0 731 254 77 34 chr5 90388061 90388534 -112696998 + L1MC4 LINE L1 7127 7578 -464 1633 98 9 5 chr5 90388534 90388758 -112696774 + AluSq SINE Alu 1 225 -88 731 254 77 34 chr5 90388758 90389083 -112696449 + L1MC4 LINE L1 7578 8041 -1 2959 9 0 0 chr5 90389123 90389469 -112696063 - AluYb8 SINE Alu 0 346 1 618 226 231 6 chr5 90390830 90391047 -112694485 - MIR SINE MIR 0 262 11 21 0 0 0 chr5 90391092 90391113 -112694419 + AT_rich Low_complexity Low_complexity 1 21 0 480 231 77 28 chr5 90391196 90391339 -112694193 + MER5A DNA MER1_type 35 184 -5 1991 148 72 28 chr5 90392219 90392578 -112692954 + THE1C LTR MaLR 1 375 0 10789 113 21 34 chr5 90392581 90394179 -112691353 + THE1C-int LTR MaLR 4 1580 0 1843 154 44 50 chr5 90394182 90394545 -112690987 + THE1B LTR MaLR 4 364 0 22 56 0 0 chr5 90395328 90395364 -112690168 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 90396910 90396940 -112688592 + AT_rich Low_complexity Low_complexity 1 30 0 1609 157 39 42 chr5 90398609 90398655 -112686877 - L1MB7 LINE L1 -8 6176 6131 2074 112 3 48 chr5 90398655 90398967 -112686565 - AluSx SINE Alu -14 298 1 1609 157 39 42 chr5 90398967 90399008 -112686524 - L1MB7 LINE L1 -53 6131 6091 198 0 0 0 chr5 90399008 90399030 -112686502 + (CA)n Simple_repeat Simple_repeat 2 23 0 1609 157 39 42 chr5 90399030 90399278 -112686254 - L1MB7 LINE L1 -93 6091 5841 1429 168 25 54 chr5 90399325 90399640 -112685892 - L1MB5 LINE L1 0 6174 5869 5568 37 0 2 chr5 90399743 90400384 -112685148 + HERVK11 LTR ERVK 7308 7947 -6 8754 71 3 13 chr5 90400391 90401472 -112684060 + MER11C LTR ERVK 2 1071 0 439 342 124 17 chr5 90401472 90401923 -112683609 - L2 LINE L2 -342 2972 2470 327 326 124 30 chr5 90403503 90403736 -112681796 - MIR SINE MIR -6 256 2 2077 113 6 31 chr5 90404405 90404723 -112680809 + AluSx SINE Alu 1 310 -2 228 141 141 47 chr5 90404949 90405034 -112680498 - L1ME4a LINE L1 0 6121 6029 1964 135 37 3 chr5 90405083 90405380 -112680152 - AluSx SINE Alu -5 307 1 1966 149 0 10 chr5 90405407 90405702 -112679830 + AluJo SINE Alu 1 292 -20 534 256 55 118 chr5 90405742 90406309 -112679223 - LTR67 LTR ERVL -6 551 21 347 267 25 25 chr5 90406331 90406451 -112679081 - L1ME4a LINE L1 -202 5919 5800 271 241 0 38 chr5 90409603 90409633 -112675899 + (TA)n Simple_repeat Simple_repeat 2 32 -45 189 0 0 0 chr5 90409633 90409654 -112675878 + (CA)n Simple_repeat Simple_repeat 2 22 0 2461 133 86 25 chr5 90409654 90410061 -112675471 + Tigger2a DNA MER2_type 3 434 0 271 241 0 38 chr5 90410061 90410108 -112675424 + (TA)n Simple_repeat Simple_repeat 30 77 0 370 128 0 39 chr5 90410440 90410518 -112675014 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 431 309 28 66 chr5 90411094 90411275 -112674257 + MER91A DNA MER1_type 1 174 -22 3501 163 35 59 chr5 90411513 90412680 -112672852 + L1MB8 LINE L1 4856 5986 -192 77 38 0 0 chr5 90412680 90412785 -112672747 + AT_rich Low_complexity Low_complexity 1 105 0 2062 130 0 7 chr5 90412791 90413083 -112672449 - AluSx SINE Alu -22 290 1 2383 215 35 21 chr5 90413084 90413734 -112671798 - L1M4 LINE L1 -1776 4370 3712 1179 308 108 20 chr5 90414063 90414602 -112670930 - L2 LINE L2 -4 3309 2684 2850 143 9 30 chr5 90414602 90415043 -112670489 - MSTB1 LTR MaLR 0 432 1 1179 308 108 20 chr5 90415043 90415231 -112670301 - L2 LINE L2 -629 2684 2514 831 295 55 0 chr5 90415224 90415461 -112670071 - MIR SINE MIR 0 262 13 * 585 261 124 98 chr5 90415485 90415952 -112669580 - L2 LINE L2 -806 2508 2030 310 277 106 31 chr5 90416159 90416480 -112669052 - L1M4 LINE L1 -1462 4684 4340 248 237 17 0 chr5 90416485 90416544 -112668988 - LTR67 LTR ERVL -8 549 490 302 255 110 40 chr5 90416695 90416895 -112668637 + L1MC/D LINE L1 5255 5468 -2340 25 31 0 0 chr5 90417133 90417165 -112668367 + AT_rich Low_complexity Low_complexity 1 32 0 778 89 20 0 chr5 90417168 90417269 -112668263 + AluSq/x SINE Alu 2 104 -209 23 33 0 0 chr5 90417286 90417316 -112668216 + AT_rich Low_complexity Low_complexity 1 30 0 764 236 56 14 chr5 90417802 90418018 -112667514 + MIR SINE MIR 37 261 -1 417 245 43 0 chr5 90418416 90418510 -112667022 + MER91C DNA MER1_type 32 129 -11 191 372 47 8 chr5 90418516 90418645 -112666887 + L2 LINE L2 2246 2379 -935 2642 90 20 6 chr5 90418800 90419155 -112666377 - L1PB2 LINE L1 -3 6148 5789 315 214 0 0 chr5 90419155 90419225 -112666307 + (TG)n Simple_repeat Simple_repeat 2 71 0 5523 170 12 18 chr5 90419225 90420311 -112665221 - L1PB2 LINE L1 -359 5792 4701 2397 83 0 3 chr5 90420311 90420623 -112664909 - AluY SINE Alu 0 311 1 2204 115 0 0 chr5 90420627 90420932 -112664600 - AluSq SINE Alu -8 305 1 5523 170 12 18 chr5 90420932 90421469 -112664063 - L1PB2 LINE L1 -1453 4698 4175 885 84 8 0 chr5 90422372 90422491 -112663041 + MLT2B2 LTR ERVL 1 120 -395 213 60 20 40 chr5 90423126 90423176 -112662356 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 252 388 0 12 chr5 90423953 90424038 -112661494 - MER5A DNA MER1_type -105 84 1 629 215 139 0 chr5 90424066 90424224 -112661308 - MER91B DNA MER1_type -10 180 1 25 51 0 0 chr5 90424466 90424505 -112661027 + AT_rich Low_complexity Low_complexity 1 39 0 209 385 46 0 chr5 90424880 90425010 -112660522 + L2 LINE L2 2550 2685 -629 543 96 0 0 chr5 90425230 90425313 -112660219 + (TA)n Simple_repeat Simple_repeat 1 83 0 379 314 39 32 chr5 90425326 90425482 -112660050 - MER5B DNA MER1_type -2 176 20 241 337 47 47 chr5 90425539 90425708 -112659824 + L2 LINE L2 2719 2887 -427 190 333 0 19 chr5 90425781 90425835 -112659697 + L2 LINE L2 3125 3177 -95 281 26 26 0 chr5 90425871 90425909 -112659623 + (CA)n Simple_repeat Simple_repeat 1 39 0 403 266 90 40 chr5 90426324 90426501 -112659031 + MER5A DNA MER1_type 2 187 -2 2214 128 7 0 chr5 90427020 90427326 -112658206 + AluSx SINE Alu 1 308 -4 1661 194 25 78 chr5 90427346 90427742 -112657790 - MLT1B LTR MaLR -15 375 1 1091 151 0 0 chr5 90428072 90428231 -112657301 - FRAM SINE Alu -7 159 1 1143 171 123 17 chr5 90428383 90428675 -112656857 - MER33 DNA MER1_type -1 323 1 259 179 119 15 chr5 90429405 90429472 -112656060 + L2 LINE L2 3238 3311 -2 183 100 0 0 chr5 90430645 90430675 -112654857 + (CA)n Simple_repeat Simple_repeat 1 30 0 285 294 8 92 chr5 90430698 90430724 -112654808 - L1MEd LINE L1 -5458 661 634 2113 122 3 3 chr5 90430724 90431018 -112654514 - AluSx SINE Alu -18 294 1 2284 120 0 0 chr5 90431028 90431337 -112654195 - AluSx SINE Alu -3 309 1 285 294 8 92 chr5 90431337 90431418 -112654114 - L1MEd LINE L1 -5494 625 553 643 237 99 66 chr5 90432024 90432435 -112653097 - L1MEd LINE L1 -906 1584 1069 457 198 139 10 chr5 90432435 90432536 -112652996 + MER81 DNA DNA 1 114 0 643 237 99 66 chr5 90432536 90432627 -112652905 - L1MEd LINE L1 -1421 1069 983 5768 58 22 0 chr5 90432663 90433356 -112652176 - L1PA5 LINE L1 0 6154 5447 7249 38 1 0 chr5 90433356 90434207 -112651325 + L1P LINE L1 3483 4334 -1812 1017 298 38 28 chr5 90434312 90434712 -112650820 - L1MEd LINE L1 -5289 830 427 784 248 71 17 chr5 90434933 90435171 -112650361 - MIR SINE MIR 0 262 12 299 195 85 12 chr5 90435196 90435278 -112650254 - L1MEd LINE L1 -6030 89 2 614 205 19 139 chr5 90435559 90435774 -112649758 + MER5A DNA MER1_type 1 189 0 2144 106 0 0 chr5 90436070 90436353 -112649179 - AluSg SINE Alu -25 285 3 370 376 103 11 chr5 90436375 90436726 -112648806 + L2 LINE L2 1857 2239 -1075 323 284 10 39 chr5 90437047 90437149 -112648383 + L2 LINE L2 2226 2324 -990 25 65 0 0 chr5 90438259 90438305 -112647227 + AT_rich Low_complexity Low_complexity 1 46 0 197 20 0 100 chr5 90438305 90438355 -112647177 + (TTTTTA)n Simple_repeat Simple_repeat 5 49 0 1726 134 0 4 chr5 90438437 90438684 -112646848 + AluSx SINE Alu 59 304 -8 262 389 19 25 chr5 90438918 90439075 -112646457 - MIR SINE MIR -87 175 20 400 154 35 22 chr5 90439928 90440048 -112645484 - LTR37A LTR ERV1 0 426 339 2101 121 27 10 chr5 90440218 90440515 -112645017 - AluSg SINE Alu -8 302 1 2330 169 91 121 chr5 90440759 90441178 -112644354 + LTR8A LTR ERV1 1 388 -339 2052 118 0 30 chr5 90441178 90441475 -112644057 - AluSx SINE Alu -24 288 1 2330 169 91 121 chr5 90441475 90441805 -112643727 + LTR8A LTR ERV1 388 727 0 646 227 8 126 chr5 90441984 90442222 -112643310 + MER58A DNA MER1_type 4 213 -11 1435 258 121 45 chr5 90442259 90442308 -112643224 + L1MCc LINE L1 801 845 -5791 2406 75 3 10 chr5 90442308 90442614 -112642918 + AluY SINE Alu 1 304 -7 1435 258 121 45 chr5 90442614 90442673 -112642859 + L1MCc LINE L1 845 898 -5738 2492 125 21 26 chr5 90442673 90443050 -112642482 - THE1C LTR MaLR 0 375 1 1435 258 121 45 chr5 90443050 90443831 -112641701 + L1MCc LINE L1 898 1747 -4889 1710 207 25 16 chr5 90443839 90444283 -112641249 + L1M4 LINE L1 4384 4831 -1315 1946 114 7 59 chr5 90444294 90444547 -112640985 + MER47A DNA MER2_type 1 238 -2085 2342 67 0 0 chr5 90444547 90444863 -112640669 + AluY SINE Alu 1 316 0 1946 114 7 59 chr5 90444863 90444915 -112640617 + MER47A DNA MER2_type 238 291 -75 815 181 0 0 chr5 90444915 90445048 -112640484 - FLAM_C SINE Alu -9 134 2 432 110 164 0 chr5 90445048 90445121 -112640411 + MER47A DNA MER2_type 282 366 0 484 156 0 13 chr5 90445135 90445212 -112640320 + L1M4 LINE L1 4869 4944 -1202 303 53 0 53 chr5 90445219 90445276 -112640256 + (TA)n Simple_repeat Simple_repeat 2 55 0 815 202 147 53 chr5 90445327 90445498 -112640034 - L1M4 LINE L1 -763 5383 5229 1818 152 50 3 chr5 90445498 90445795 -112639737 - AluSq SINE Alu -1 312 2 815 202 147 53 chr5 90445795 90445830 -112639702 - L1M4 LINE L1 -917 5229 5199 2221 113 0 0 chr5 90445830 90446123 -112639409 - AluSx SINE Alu -18 294 2 815 202 147 53 chr5 90446123 90446256 -112639276 - L1M4 LINE L1 -947 5199 5011 427 319 9 9 chr5 90446256 90446372 -112639160 - MLT1G3 LTR MaLR -286 244 129 1706 212 64 100 chr5 90446374 90446742 -112638790 - LTR8 LTR ERV1 0 691 311 2265 124 119 57 chr5 90446742 90446996 -112638536 + MSTA LTR MaLR 1 238 -190 2758 10 0 13 chr5 90446996 90447306 -112638226 - AluY SINE Alu -5 306 1 2265 124 119 57 chr5 90447306 90447411 -112638121 + MSTA LTR MaLR 238 390 -38 2248 105 10 0 chr5 90447411 90447716 -112637816 - AluSg SINE Alu -2 308 1 2265 124 119 57 chr5 90447716 90447758 -112637774 + MSTA LTR MaLR 390 428 0 1706 212 64 100 chr5 90447758 90447908 -112637624 - LTR8 LTR ERV1 -380 311 192 959 128 0 8 chr5 90448009 90448142 -112637390 - FLAM_C SINE Alu -1 132 1 405 279 68 14 chr5 90448159 90448306 -112637226 + HERVL LTR ERVL 2937 3091 -2563 587 352 42 3 chr5 90448324 90448608 -112636924 + HERVL LTR ERVL 3213 3507 -2257 706 139 52 35 chr5 90448757 90448872 -112636660 + FLAM_A SINE Alu 1 117 -16 318 67 0 0 chr5 90448875 90448920 -112636612 + (GA)n Simple_repeat Simple_repeat 2 46 0 1250 313 98 31 chr5 90449044 90449846 -112635686 + HERVL LTR ERVL 4076 4931 -833 2239 111 3 0 chr5 90450291 90450589 -112634943 + AluSq SINE Alu 1 299 -14 539 207 18 9 chr5 90450981 90451092 -112634440 + LTR67 LTR ERVL 432 543 -14 197 271 0 0 chr5 90451115 90451163 -112634369 + L2 LINE L2 3219 3266 -6 474 290 13 13 chr5 90452538 90452693 -112632839 + L2 LINE L2 3159 3313 0 1690 123 8 0 chr5 90452921 90453182 -112632350 - AluSx SINE Alu 0 309 47 2321 73 257 6 chr5 90453182 90453540 -112631992 + LTR7 LTR ERV1 1 448 -2 15525 88 13 15 chr5 90453542 90456543 -112628989 + HERVH LTR ERV1 1 2994 -4719 5417 87 8 10 chr5 90456522 90457294 -112628238 + HERVH LTR ERV1 3104 3873 -3840 * 1222 96 0 0 chr5 90457279 90457446 -112628086 + HERVH LTR ERV1 3827 3993 -3720 * 4372 143 1 1 chr5 90457450 90458107 -112627425 + HERVH LTR ERV1 4490 5146 -2567 1454 120 18 5 chr5 90458111 90458328 -112627204 + HERVH LTR ERV1 5600 5819 -1894 * 2347 106 53 13 chr5 90458326 90458703 -112626829 + HERVH LTR ERV1 7322 7713 0 2940 75 95 5 chr5 90458703 90459114 -112626418 + LTR7 LTR ERV1 1 448 -2 293 139 0 0 chr5 90459116 90459159 -112626373 - AluSx SINE Alu -251 51 9 1345 102 0 0 chr5 90459484 90459660 -112625872 - AluSc SINE Alu -5 304 129 840 190 128 104 chr5 90460648 90460911 -112624621 + LTR37B LTR ERV1 9 287 -181 2331 90 0 0 chr5 90460911 90461210 -112624322 - AluSg SINE Alu -11 299 1 840 190 128 104 chr5 90461210 90461377 -112624155 + LTR37B LTR ERV1 287 449 -19 887 179 23 23 chr5 90462379 90462552 -112622980 - FAM SINE Alu -1 48 1 625 227 78 7 chr5 90462768 90462922 -112622610 + MIR SINE MIR 21 185 -77 295 512 19 0 chr5 90463183 90463355 -112622177 + AluS SINE Alu 1 60 -241 2297 112 0 0 chr5 90463436 90463741 -112621791 - AluSc SINE Alu -4 305 1 278 325 63 30 chr5 90463845 90463987 -112621545 + L1MC4a LINE L1 4600 4736 -1410 2196 123 0 0 chr5 90463987 90464280 -112621252 - AluSq SINE Alu -20 293 1 278 325 63 30 chr5 90464280 90464759 -112620773 + L1MC4a LINE L1 4736 5241 -905 217 229 0 0 chr5 90464774 90464835 -112620697 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 424 295 80 18 chr5 90464839 90465159 -112620373 + L1MC4a LINE L1 5255 5593 -572 1756 251 101 40 chr5 90465166 90465380 -112620152 - L2 LINE L2 0 3313 3114 1970 140 25 0 chr5 90465380 90465666 -112619866 + AluSx SINE Alu 1 293 -19 180 111 0 0 chr5 90465673 90465700 -112619832 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1756 251 101 40 chr5 90465700 90466466 -112619066 - L2 LINE L2 -204 3109 2267 311 199 51 38 chr5 90466499 90466648 -112618884 - L1MC4 LINE L1 -1333 6709 6612 436 208 0 29 chr5 90466650 90466823 -112618709 + (TA)n Simple_repeat Simple_repeat 1 168 0 282 29 0 0 chr5 90466831 90466866 -112618666 + (TG)n Simple_repeat Simple_repeat 2 36 0 809 263 53 0 chr5 90466866 90467087 -112618445 - L2 LINE L2 -1095 2219 1984 1305 119 0 0 chr5 90467088 90467265 -112618267 + AluSq SINE Alu 135 311 -2 353 283 162 22 chr5 90467282 90467554 -112617978 + L1MC4a LINE L1 5574 5883 -1925 350 229 271 0 chr5 90467671 90467811 -112617721 + MIR SINE MIR 83 260 -2 28 29 0 0 chr5 90467826 90467861 -112617671 + AT_rich Low_complexity Low_complexity 1 35 0 246 274 0 14 chr5 90468483 90468556 -112616976 - L3 LINE CR1 -243 1334 1263 211 341 236 0 chr5 90469320 90469443 -112616089 - L3 LINE CR1 -306 1271 1120 293 256 89 48 chr5 90469660 90469828 -112615704 + L3 LINE CR1 792 966 -611 523 181 302 13 chr5 90470127 90470230 -112615302 + MER3 DNA MER1_type 7 79 -130 198 71 0 0 chr5 90470230 90470258 -112615274 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 523 181 302 13 chr5 90470258 90470303 -112615229 + MER3 DNA MER1_type 79 198 -11 283 159 32 32 chr5 90470260 90470323 -112615209 - MER3 DNA MER1_type -106 103 41 * 252 227 91 30 chr5 90470577 90470643 -112614889 + MIR SINE MIR 25 94 -168 342 149 90 0 chr5 90471283 90471350 -112614182 - L1MB8 LINE L1 -158 6020 5948 1815 185 0 0 chr5 90473178 90473475 -112612057 - AluJo SINE Alu -15 297 1 2220 102 0 0 chr5 90473480 90473812 -112611720 - AluSg SINE Alu 0 333 2 2671 143 41 7 chr5 90474181 90474622 -112610910 + L1MB3 LINE L1 5725 6180 -3 278 125 0 36 chr5 90474638 90474694 -112610838 + L1MB3 LINE L1 6129 6182 -1 242 210 65 0 chr5 90475217 90475279 -112610253 + L3 LINE CR1 957 1022 -555 948 159 122 12 chr5 90475985 90476230 -112609302 - MER5C DNA MER1_type -1 323 52 227 161 0 36 chr5 90477530 90477586 -112607946 - LTR66 LTR ERVL -155 455 402 533 270 55 45 chr5 90477700 90477900 -112607632 + MIR SINE MIR 5 206 -56 21 0 0 0 chr5 90477941 90477962 -112607570 + AT_rich Low_complexity Low_complexity 1 21 0 2108 116 20 0 chr5 90477969 90478261 -112607271 + AluSx SINE Alu 1 298 -14 674 179 0 9 chr5 90478469 90478581 -112606951 + AluSg/x SINE Alu 183 293 -19 198 0 0 0 chr5 90478867 90478889 -112606643 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2472 40 0 30 chr5 90478893 90479196 -112606336 - AluY SINE Alu -17 294 1 1648 172 19 38 chr5 90479296 90479609 -112605923 + MER93b LTR ERV1 1 307 -66 865 40 111 16 chr5 90479609 90479735 -112605797 - MER85 DNA T2_type -1 138 1 1731 158 4 4 chr5 90479761 90480039 -112605493 - AluJo SINE Alu -10 302 25 353 103 0 35 chr5 90480041 90480099 -112605433 + MER93a LTR ERV1 347 402 0 545 279 34 40 chr5 90480210 90480424 -112605108 - MER20B DNA MER1_type 0 219 2 2255 101 0 0 chr5 90480966 90481252 -112604280 - AluSx SINE Alu -21 291 6 756 177 15 0 chr5 90481540 90481670 -112603862 - FRAM SINE Alu -2 174 43 1782 128 0 0 chr5 90481788 90482030 -112603502 - AluSx SINE Alu -13 299 58 1577 53 0 5 chr5 90482130 90482319 -112603213 + AluY SINE Alu 104 291 -20 281 289 61 55 chr5 90482374 90482737 -112602795 - HAL1b LINE L1 -868 480 116 189 0 0 0 chr5 90484879 90484900 -112600632 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 1636 122 34 34 chr5 90484958 90485220 -112600312 + AluSx SINE Alu 2 263 -49 198 0 0 0 chr5 90485232 90485254 -112600278 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6299 74 42 35 chr5 90485347 90486291 -112599241 - SVA Other Other -3 1383 433 5157 87 34 28 chr5 90486309 90487232 -112598300 - SVA Other Other -518 868 16 434 308 88 42 chr5 90488168 90488431 -112597101 + L2 LINE L2 2211 2485 -829 2403 50 0 7 chr5 90488545 90488845 -112596687 - AluY SINE Alu -13 298 1 1078 52 75 0 chr5 90488845 90488979 -112596553 - AluY SINE Alu -167 144 1 443 261 33 39 chr5 90489176 90489329 -112596203 + L2 LINE L2 3161 3312 -1 1839 168 3 0 chr5 90489543 90489870 -112595662 + AluSx SINE Alu 1 312 0 1884 144 10 17 chr5 90489907 90490206 -112595326 - AluJo SINE Alu -15 297 1 210 37 0 0 chr5 90490501 90490528 -112595004 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2006 132 7 7 chr5 90490925 90491220 -112594312 - AluSx SINE Alu -17 295 1 2084 121 24 0 chr5 90491225 90491515 -112594017 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 90491612 90491632 -112593900 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1804 135 18 15 chr5 90491636 90491910 -112593622 - AluSx SINE Alu -37 275 1 2147 63 49 18 chr5 90492385 90492671 -112592861 - AluY SINE Alu -16 295 1 252 279 62 53 chr5 90492680 90492924 -112592608 - L1M4 LINE L1 -1771 4375 4130 591 249 15 60 chr5 90493588 90493789 -112591743 - Charlie8 DNA MER1_type -2225 192 1 632 219 29 19 chr5 90494102 90494287 -112591245 - L1MA10 LINE L1 0 6164 5988 1947 118 0 4 chr5 90494328 90494591 -112590941 + AluSq SINE Alu 36 297 -16 780 198 96 6 chr5 90494618 90494775 -112590757 - AluJo/FRAM SINE Alu -8 304 134 1824 162 7 14 chr5 90494775 90495071 -112590461 - AluJo SINE Alu -18 294 1 45 0 0 33 chr5 90495149 90495193 -112590339 + AT_rich Low_complexity Low_complexity 1 44 -14 2060 120 14 7 chr5 90495193 90495485 -112590047 - AluSx SINE Alu -18 294 1 45 0 0 33 chr5 90495485 90495500 -112590032 + AT_rich Low_complexity Low_complexity 44 58 0 31 0 0 0 chr5 90495647 90495678 -112589854 + AT_rich Low_complexity Low_complexity 1 31 0 766 272 25 15 chr5 90495856 90496058 -112589474 + MIR SINE MIR 11 214 -48 649 144 0 16 chr5 90496063 90496188 -112589344 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 2200 121 3 0 chr5 90496200 90496507 -112589025 - AluSg SINE Alu -2 308 1 191 337 95 56 chr5 90496806 90497112 -112588420 + L2 LINE L2 2561 2878 -436 1461 257 87 17 chr5 90497805 90497898 -112587634 - Tigger8 DNA MER2_type -100 566 481 240 35 0 0 chr5 90497898 90497927 -112587605 + (TG)n Simple_repeat Simple_repeat 2 30 0 2014 114 0 40 chr5 90497927 90498224 -112587308 - AluSx SINE Alu -27 285 1 1461 257 87 17 chr5 90498224 90498658 -112586874 - Tigger8 DNA MER2_type -184 482 1 255 176 71 24 chr5 90498802 90498887 -112586645 + (TTTAA)n Simple_repeat Simple_repeat 3 91 0 1705 129 4 12 chr5 90499066 90499321 -112586211 - AluJo SINE Alu -59 253 1 534 275 93 25 chr5 90499486 90499722 -112585810 + MIR SINE MIR 1 252 -10 17848 190 32 23 chr5 90499744 90503438 -112582094 + L1PA15 LINE L1 1061 4970 -1846 2141 120 13 0 chr5 90503438 90503738 -112581794 - AluSx SINE Alu -8 304 1 17848 190 32 23 chr5 90503738 90505602 -112579930 + L1PA15 LINE L1 4970 6815 -1 952 111 7 0 chr5 90505602 90505733 -112579799 + L1PA15 LINE L1 6025 6160 -5 420 304 103 62 chr5 90505735 90506093 -112579439 + L1MC4a LINE L1 6277 6649 -1159 * 779 200 29 178 chr5 90506087 90506639 -112578893 + L1MC5 LINE L1 6693 7143 -818 1885 123 34 24 chr5 90506639 90506931 -112578601 + AluSq SINE Alu 1 295 -18 779 200 29 178 chr5 90506931 90507003 -112578529 + L1MC5 LINE L1 7143 7224 -737 308 241 109 29 chr5 90507202 90507339 -112578193 + L1MC5 LINE L1 7350 7497 -464 389 204 45 0 chr5 90507551 90507639 -112577893 - MER5C DNA MER1_type -200 124 33 259 274 16 0 chr5 90507648 90507710 -112577822 - MER5C DNA MER1_type -260 64 2 271 214 71 0 chr5 90507714 90507798 -112577734 + L1MC5 LINE L1 7501 7590 -371 225 239 9 37 chr5 90507893 90508002 -112577530 + L1MC4 LINE L1 7914 8019 -23 2217 116 0 0 chr5 90508067 90508370 -112577162 - AluSx SINE Alu -3 309 7 25 51 0 0 chr5 90508813 90508852 -112576680 + AT_rich Low_complexity Low_complexity 1 39 0 616 128 0 75 chr5 90509091 90509224 -112576308 - L1MC5 LINE L1 -28 7933 7811 25 0 0 0 chr5 90509338 90509363 -112576169 + AT_rich Low_complexity Low_complexity 1 25 0 911 110 8 30 chr5 90509431 90509634 -112575898 - L1MB2 LINE L1 -7 6164 5906 2053 102 0 0 chr5 90509634 90509898 -112575634 - AluSc SINE Alu -10 299 36 911 110 8 30 chr5 90509898 90509957 -112575575 - L1MB2 LINE L1 -265 5906 5847 1689 189 3 10 chr5 90510239 90510536 -112574996 - AluJb SINE Alu -17 295 1 23 54 0 0 chr5 90512154 90512191 -112573341 + AT_rich Low_complexity Low_complexity 1 37 0 407 353 139 22 chr5 90513910 90514321 -112571211 + L2 LINE L2 2329 2787 -527 243 250 110 15 chr5 90514400 90514536 -112570996 - L1M4 LINE L1 -5667 1188 1040 431 238 44 23 chr5 90514917 90515100 -112570432 - L1M4 LINE L1 -6318 537 69 315 194 46 9 chr5 90515128 90515236 -112570296 - L1P5 LINE L1 -717 5434 5323 254 413 0 14 chr5 90515294 90515432 -112570100 + L2 LINE L2 3048 3183 -89 1792 169 3 7 chr5 90515432 90515727 -112569805 - AluSx SINE Alu -6 306 13 2021 118 34 3 chr5 90515735 90516032 -112569500 - AluSc SINE Alu -3 306 1 3363 85 37 0 chr5 90516032 90516685 -112568847 - L1PB1 LINE L1 -178 5973 5254 15558 56 3 1 chr5 90516689 90518785 -112566747 - L1P LINE L1 -3077 3069 971 5281 197 18 22 chr5 90518782 90519462 -112566070 - L1PB1 LINE L1 -905 5241 4568 * 2352 94 0 7 chr5 90519462 90519771 -112565761 - AluY SINE Alu -4 307 1 5281 197 18 22 chr5 90519771 90520421 -112565111 - L1PB1 LINE L1 -1578 4568 3917 2694 276 108 42 chr5 90520500 90521850 -112563682 + L2 LINE L2 1885 3313 0 823 248 156 29 chr5 90523230 90523545 -112561987 - MLT1H LTR MaLR 0 549 195 249 200 50 0 chr5 90523599 90523659 -112561873 - MLT1H LTR MaLR -486 63 1 335 306 61 39 chr5 90523924 90524104 -112561428 + HAL1 LINE L1 2262 2445 -62 1675 124 0 4 chr5 90524105 90524364 -112561168 + MER2 DNA MER2_type 2 259 -86 2307 72 0 40 chr5 90524382 90524524 -112561008 + AluSg SINE Alu 1 126 -184 2387 81 0 3 chr5 90524524 90524821 -112560711 + AluSc SINE Alu 1 296 -13 2307 72 0 40 chr5 90524821 90524982 -112560550 + AluSg SINE Alu 126 292 -18 577 137 43 43 chr5 90525770 90525909 -112559623 + L1MD2 LINE L1 6218 6356 -3 301 274 14 0 chr5 90525909 90525982 -112559550 + L1ME1 LINE L1 5951 6024 -142 891 112 0 8 chr5 90526290 90526415 -112559117 + FLAM_C SINE Alu 1 124 -19 23 0 0 0 chr5 90526506 90526529 -112559003 + AT_rich Low_complexity Low_complexity 1 23 0 3848 115 40 0 chr5 90526749 90527357 -112558175 - MER39B LTR ERV1 -21 632 1 186 125 31 0 chr5 90527404 90527436 -112558096 - L2 LINE L2 -13 3300 3268 189 307 55 43 chr5 90527471 90527634 -112557898 + L2 LINE L2 1900 2064 -1250 774 204 0 14 chr5 90527635 90527777 -112557755 - FRAM SINE Alu -18 158 19 21 36 0 0 chr5 90528058 90528086 -112557446 + AT_rich Low_complexity Low_complexity 1 28 0 302 250 174 70 chr5 90528180 90528352 -112557180 - MLT1J LTR MaLR -321 190 1 799 132 11 58 chr5 90528524 90528698 -112556834 + L1MC2 LINE L1 5940 6105 -239 300 152 45 15 chr5 90528701 90528767 -112556765 - LTR37A LTR ERV1 -334 92 25 1959 113 0 92 chr5 90528978 90529306 -112556226 + AluSx SINE Alu 6 303 -9 2781 0 0 0 chr5 90529492 90529790 -112555742 - AluYa5 SINE Alu -13 298 1 338 308 79 28 chr5 90529809 90530241 -112555291 - L1M4 LINE L1 -2027 4119 3666 225 359 72 10 chr5 90530319 90530514 -112555018 - LTR16C LTR ERVL 0 491 285 1917 149 7 0 chr5 90531107 90531389 -112554143 - AluJo SINE Alu -28 284 1 1652 243 81 17 chr5 90531978 90532500 -112553032 - MLT1H1 LTR MaLR 0 555 1 279 292 85 0 chr5 90532611 90532741 -112552791 + L1ME LINE L1 5482 5622 -499 446 304 87 65 chr5 90533093 90533448 -112552084 + L2 LINE L2 2873 3235 -78 392 306 106 17 chr5 90533449 90533629 -112551903 + L2 LINE L2 3118 3313 0 2725 268 63 19 chr5 90533978 90534302 -112551230 - L1MEc LINE L1 -5143 1253 945 1814 129 163 37 chr5 90534302 90534682 -112550850 - MSTA LTR MaLR 0 428 1 9868 122 23 33 chr5 90534682 90536275 -112549257 - MSTA-int LTR MaLR 0 1580 3 1999 122 168 11 chr5 90536277 90536647 -112548885 - MSTA LTR MaLR 0 428 1 2725 268 63 19 chr5 90536647 90537466 -112548066 - L1MEc LINE L1 -5451 945 56 1077 178 45 116 chr5 90538441 90538839 -112546693 + MLT1B LTR MaLR 6 375 -15 21 0 0 0 chr5 90539062 90539083 -112546449 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 90539225 90539249 -112546283 + AT_rich Low_complexity Low_complexity 1 24 0 5131 22 0 0 chr5 90540066 90540696 -112544836 - L1PA3 LINE L1 -1098 5048 4419 7699 20 1 2 chr5 90540696 90541807 -112543725 + L1PA3 LINE L1 5049 6155 0 311 285 80 28 chr5 90542284 90542499 -112543033 - L1MC4a LINE L1 -146 5975 5748 425 230 48 38 chr5 90542507 90542739 -112542793 - HAL1b LINE L1 -134 2373 746 1574 180 27 63 chr5 90542963 90543263 -112542269 + AluJo SINE Alu 1 289 -23 1317 258 68 33 chr5 90544960 90545564 -112539968 - L1MC4a LINE L1 -1882 5926 5302 497 190 307 7 chr5 90546347 90546484 -112539048 - MER5B DNA MER1_type 0 178 1 328 179 42 53 chr5 90546589 90546684 -112538848 - MER5A DNA MER1_type -87 102 9 377 344 38 19 chr5 90546802 90546962 -112538570 + MIR3 SINE MIR 39 201 -7 180 254 182 61 chr5 90547063 90547244 -112538288 - L2 LINE L2 -99 3214 3012 1889 146 26 34 chr5 90547989 90548339 -112537193 + MER7A DNA MER2_type 2 346 0 613 214 71 22 chr5 90548452 90548634 -112536898 - MLT1K LTR MaLR -9 579 389 180 0 0 0 chr5 90548672 90548692 -112536840 + (T)n Simple_repeat Simple_repeat 1 20 0 1212 184 73 17 chr5 90549501 90549789 -112535743 - MLT1C LTR MaLR 0 467 164 429 282 136 61 chr5 90550087 90550381 -112535151 + L3 LINE CR1 1249 1564 -13 245 253 38 25 chr5 90550547 90550626 -112534906 - MIR SINE MIR 0 262 183 356 261 102 19 chr5 90551484 90551641 -112533891 - L1ME4a LINE L1 -5 6116 5947 304 277 0 9 chr5 90551659 90551771 -112533761 - L1MC4a LINE L1 -1926 5882 5772 22 56 0 0 chr5 90552174 90552210 -112533322 + AT_rich Low_complexity Low_complexity 1 36 0 365 271 26 73 chr5 90552440 90552591 -112532941 - L1MC4 LINE L1 -5 8037 7894 469 232 101 20 chr5 90552646 90552823 -112532709 + L1ME4a LINE L1 5671 5867 -254 1802 140 46 7 chr5 90552823 90553108 -112532424 + AluSx SINE Alu 1 296 -16 469 232 101 20 chr5 90553108 90553128 -112532404 + L1ME4a LINE L1 5867 5884 -237 457 187 36 12 chr5 90553893 90554059 -112531473 + (TA)n Simple_repeat Simple_repeat 1 170 0 1722 175 3 16 chr5 90554061 90554370 -112531162 - AluJo SINE Alu -5 307 3 231 310 81 11 chr5 90554633 90554720 -112530812 + MIR SINE MIR 16 108 -100 1698 206 0 13 chr5 90555279 90555595 -112529937 + AluJo SINE Alu 1 312 0 2287 97 3 3 chr5 90555737 90556035 -112529497 - AluSx SINE Alu -14 298 1 1157 108 34 0 chr5 90556055 90556231 -112529301 + L1PA13 LINE L1 5978 6159 -4 347 252 122 14 chr5 90556614 90556753 -112528779 + L3 LINE CR1 515 668 -909 182 61 0 61 chr5 90557018 90557051 -112528481 + (TAA)n Simple_repeat Simple_repeat 3 33 0 552 208 138 19 chr5 90557066 90557225 -112528307 - MIR SINE MIR -14 248 71 2144 89 24 10 chr5 90557446 90557738 -112527794 + AluSx SINE Alu 1 296 -16 182 237 0 85 chr5 90559865 90559924 -112525608 + L3 LINE CR1 1516 1569 -8 3210 63 2 16 chr5 90560368 90560795 -112524737 + L1PA7 LINE L1 5719 6139 -15 229 67 22 22 chr5 90560926 90560971 -112524561 + (TA)n Simple_repeat Simple_repeat 1 45 0 22 94 0 0 chr5 90561285 90561349 -112524183 + AT_rich Low_complexity Low_complexity 1 64 0 288 222 111 25 chr5 90561763 90561844 -112523688 + L2 LINE L2 3149 3236 -36 200 390 80 20 chr5 90562966 90563266 -112522266 + L2 LINE L2 1712 2029 -1285 754 244 64 4 chr5 90565360 90565594 -112519938 + MER112 DNA MER1_type 1 248 -12 336 350 36 7 chr5 90565685 90565822 -112519710 + MIR SINE MIR 4 144 -118 218 341 12 0 chr5 90565986 90566071 -112519461 + MIR SINE MIR 107 192 -70 21 57 0 0 chr5 90567840 90567875 -112517657 + AT_rich Low_complexity Low_complexity 1 35 0 1946 146 4 0 chr5 90567896 90568221 -112517311 + AluSx SINE Alu 1 326 0 1713 140 16 57 chr5 90569284 90569599 -112515933 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr5 90569805 90569826 -112515706 + AT_rich Low_complexity Low_complexity 1 21 0 2053 165 3 0 chr5 90570669 90570984 -112514548 + 7SLRNA srpRNA srpRNA 1 316 -4 992 116 58 69 chr5 90571421 90571610 -112513922 - THE1B LTR MaLR 0 364 178 15102 41 5 0 chr5 90571610 90574258 -112511274 - L1PA5 LINE L1 0 6154 3525 15067 47 6 1 chr5 90574358 90576860 -112508672 - L1PA5 LINE L1 -126 6028 3516 1216 151 0 11 chr5 90576860 90577046 -112508486 - THE1B LTR MaLR -180 184 1 18527 93 14 3 chr5 90577736 90580315 -112505217 + L1P LINE L1 1 2605 -3541 1270 101 0 0 chr5 90580338 90580517 -112505015 + L1PA5 LINE L1 5976 6154 0 26 82 0 0 chr5 90581175 90581236 -112504296 + AT_rich Low_complexity Low_complexity 1 61 0 552 241 117 63 chr5 90581289 90581602 -112503930 - MLT1H1 LTR MaLR -227 363 52 759 189 38 0 chr5 90582487 90582646 -112502886 + L1MA10 LINE L1 6168 6332 -2 279 307 0 47 chr5 90582779 90582906 -112502626 + LTR67 LTR ERVL 427 547 -10 226 184 0 41 chr5 90583161 90583210 -112502322 + MER96B DNA MER1_type? 1 47 -370 * 330 209 0 0 chr5 90583203 90583270 -112502262 - MER96B DNA MER1_type? -108 67 1 231 319 153 0 chr5 90583354 90583511 -112502021 - MIR SINE MIR -28 234 54 4785 186 27 52 chr5 90583512 90583722 -112501810 + L1MD1 LINE L1 4567 4781 -1461 2124 98 35 0 chr5 90583722 90584007 -112501525 + AluSp SINE Alu 1 295 -18 4785 186 27 52 chr5 90584007 90585531 -112500001 + L1MD1 LINE L1 4781 6242 0 690 219 0 0 chr5 90585893 90586021 -112499511 - FLAM_A SINE Alu -5 128 1 289 261 45 11 chr5 90587050 90587138 -112498394 - MLT1H LTR MaLR 0 595 505 747 274 78 26 chr5 90587184 90587491 -112498041 - MLT1H LTR MaLR -188 361 39 882 222 97 35 chr5 90587765 90588148 -112497384 - L1MEc LINE L1 -4858 1357 951 602 208 20 0 chr5 90588148 90588249 -112497283 + MER58A DNA MER1_type 1 103 -4 1974 231 39 4 chr5 90588249 90588716 -112496816 - L1MEc LINE L1 -5506 890 408 872 264 56 15 chr5 90588736 90589005 -112496527 - L1MEc LINE L1 -6083 313 34 498 229 76 0 chr5 90589090 90589234 -112496298 + L1ME4a LINE L1 5507 5661 -460 30 27 0 0 chr5 90589244 90589281 -112496251 + AT_rich Low_complexity Low_complexity 1 37 0 211 267 0 0 chr5 90589574 90589619 -112495913 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 245 78 0 chr5 90589625 90589727 -112495805 + L1ME4a LINE L1 6011 6120 -1 22 35 0 0 chr5 90591561 90591590 -112493942 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr5 90591868 90591915 -112493617 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr5 90592213 90592236 -112493296 + AT_rich Low_complexity Low_complexity 1 23 0 317 109 0 0 chr5 90592260 90592306 -112493226 - MADE1 DNA Mariner -34 46 1 2312 83 0 3 chr5 90592962 90593263 -112492269 - AluSg1 SINE Alu -9 300 1 27 73 0 0 chr5 90594057 90594112 -112491420 + AT_rich Low_complexity Low_complexity 1 55 0 2377 88 7 0 chr5 90594654 90594959 -112490573 - AluSx SINE Alu -5 307 1 249 256 17 68 chr5 90595195 90595312 -112490220 + L3 LINE CR1 523 633 -944 609 297 60 90 chr5 90595321 90595688 -112489844 + L3 LINE CR1 821 1176 -401 926 250 115 50 chr5 90595843 90596207 -112489325 - MLT1J LTR MaLR -110 401 14 597 278 52 5 chr5 90596228 90596419 -112489113 + L3 LINE CR1 1309 1508 -69 265 312 112 8 chr5 90597748 90597873 -112487659 + MIR SINE MIR 66 203 -59 1743 256 61 15 chr5 90598416 90598996 -112486536 - L1ME3A LINE L1 -61 6109 5509 23 33 0 0 chr5 90601765 90601795 -112483737 + AT_rich Low_complexity Low_complexity 1 30 0 270 354 109 35 chr5 90602309 90602816 -112482716 - L2 LINE L2 -5 3267 2710 271 294 0 11 chr5 90602967 90603059 -112482473 + (TA)n Simple_repeat Simple_repeat 1 91 0 296 179 21 21 chr5 90603075 90603170 -112482362 + (TA)n Simple_repeat Simple_repeat 2 96 0 206 325 26 44 chr5 90603208 90603322 -112482210 - MIR SINE MIR -150 112 1 323 285 36 130 chr5 90603410 90603663 -112481869 - L2 LINE L2 -836 2478 2250 28 0 0 0 chr5 90604435 90604463 -112481069 + AT_rich Low_complexity Low_complexity 1 28 0 7486 29 0 0 chr5 90604463 90605480 -112480052 - L1PA5 LINE L1 -8 6146 5127 1469 265 90 25 chr5 90605486 90606217 -112479315 - HAL1b LINE L1 -225 1123 345 370 350 61 18 chr5 90608372 90608733 -112476799 - L1ME3A LINE L1 -759 5387 5052 867 214 5 38 chr5 90609505 90609715 -112475817 + MER3 DNA MER1_type 7 209 0 401 238 118 50 chr5 90609787 90610144 -112475388 + L1MC5 LINE L1 7537 7917 -44 207 283 38 0 chr5 90610208 90610261 -112475271 - MIR SINE MIR -174 88 34 251 275 110 18 chr5 90611758 90611867 -112473665 - L2 LINE L2 -62 3251 3133 185 294 118 0 chr5 90612899 90612950 -112472582 + L2 LINE L2 3134 3190 -82 189 0 0 0 chr5 90612950 90612971 -112472561 + (TG)n Simple_repeat Simple_repeat 2 22 0 250 237 10 21 chr5 90613000 90613097 -112472435 + L1MC4 LINE L1 6616 6711 -1331 542 336 113 12 chr5 90613218 90613545 -112471987 - L2 LINE L2 -896 2418 2059 2256 105 0 3 chr5 90614152 90614448 -112471084 - AluSq SINE Alu -18 295 1 279 0 0 0 chr5 90614672 90614703 -112470829 + (TG)n Simple_repeat Simple_repeat 2 32 0 4698 164 10 40 chr5 90615995 90616912 -112468620 - L1P LINE L1 -1845 4301 3413 3006 182 43 13 chr5 90616906 90618146 -112467386 + L1PA6 LINE L1 4849 6154 0 * 1675 163 7 33 chr5 90618259 90618559 -112466973 + AluJo SINE Alu 3 294 -18 552 68 0 0 chr5 90618686 90618759 -112466773 - AluY SINE Alu -12 300 228 1196 109 0 0 chr5 90618759 90618915 -112466617 - AluY SINE Alu -154 157 2 6759 83 18 3 chr5 90618915 90620620 -112464912 - L1PA7 LINE L1 -2 6467 4739 9024 104 17 30 chr5 90620720 90622241 -112463291 - L1PA7 LINE L1 -2886 3575 2074 7111 121 4 2 chr5 90622370 90623424 -112462108 - L1PA7 LINE L1 -5405 1056 1 1746 149 54 0 chr5 90623522 90623837 -112461695 + L1PA16 LINE L1 5827 6158 -8 281 278 9 153 chr5 90623954 90624182 -112461350 + MIR SINE MIR 19 212 -50 326 267 46 62 chr5 90624273 90624368 -112461164 + MIR SINE MIR 71 166 -96 1834 169 107 23 chr5 90624368 90624759 -112460773 - MSTA LTR MaLR -4 424 1 326 267 46 62 chr5 90624759 90624858 -112460674 + MIR SINE MIR 166 262 0 24 0 0 0 chr5 90624858 90624882 -112460650 + AT_rich Low_complexity Low_complexity 1 24 0 30470 116 16 64 chr5 90625000 90630862 -112454670 - L1P3 LINE L1 -574 5580 12 7298 26 6 300 chr5 90631109 90632871 -112452661 + SVA Other Other 142 1386 0 228 67 0 0 chr5 90633424 90633454 -112452078 + (CA)n Simple_repeat Simple_repeat 2 31 0 267 339 107 67 chr5 90633765 90634166 -112451366 - L2 LINE L2 -20 3252 2836 311 311 199 33 chr5 90634258 90634741 -112450791 - L2 LINE L2 -604 2710 2148 228 306 81 77 chr5 90635056 90635278 -112450254 - L2 LINE L2 -1429 1885 1663 4313 229 51 8 chr5 90635404 90636759 -112448773 - L1ME LINE L1 -2437 3643 2231 1968 270 76 64 chr5 90636786 90637340 -112448192 - L1ME LINE L1 -3909 2171 1625 2278 101 0 0 chr5 90637340 90637636 -112447896 - AluSx SINE Alu -16 296 1 1968 270 76 64 chr5 90637636 90638693 -112446839 - L1ME LINE L1 -4455 1625 544 679 111 82 22 chr5 90638693 90638794 -112446738 + L1PA13 LINE L1 6021 6133 -30 2150 138 0 3 chr5 90638794 90639098 -112446434 - AluSx SINE Alu -9 303 1 679 111 82 22 chr5 90639098 90639131 -112446401 + L1PA13 LINE L1 6133 6163 0 1968 270 76 64 chr5 90639131 90639657 -112445875 - L1ME LINE L1 -5536 544 26 790 243 61 14 chr5 90639665 90639879 -112445653 + MER58A DNA MER1_type 1 224 0 216 383 108 16 chr5 90640091 90640657 -112444875 + L2 LINE L2 1616 2233 -1081 315 259 152 45 chr5 90640695 90640807 -112444725 + MIR SINE MIR 53 176 -86 410 264 132 19 chr5 90640884 90641043 -112444489 + LTR16C LTR ERVL 315 491 0 825 372 230 24 chr5 90642719 90643340 -112442192 + Charlie7 DNA MER1_type 6 754 -1858 581 241 85 52 chr5 90643321 90643591 -112441941 + Charlie7 DNA MER1_type 2084 2362 -250 * 511 210 45 35 chr5 90644163 90644363 -112441169 + Charlie7 DNA MER1_type 2411 2612 0 538 244 41 8 chr5 90644410 90644533 -112440999 - L2 LINE L2 0 3313 3187 455 297 45 45 chr5 90644631 90644786 -112440746 + L2 LINE L2 3118 3272 0 859 166 113 0 chr5 90645401 90645552 -112439980 - FRAM SINE Alu -8 168 1 1440 194 27 0 chr5 90645552 90645845 -112439687 + MER58B DNA MER1_type 40 340 -1 555 233 244 0 chr5 90645910 90646082 -112439450 - MIR SINE MIR -29 233 20 775 178 178 22 chr5 90646905 90647090 -112438442 + MER58A DNA MER1_type 1 214 -10 253 294 300 0 chr5 90647113 90647273 -112438259 + L3b LINE CR1 1180 1387 -196 349 259 28 19 chr5 90647811 90647919 -112437613 + MER5A DNA MER1_type 35 143 -46 228 250 26 13 chr5 90647959 90648035 -112437497 + MIR SINE MIR 20 96 -166 22 80 0 0 chr5 90649080 90649130 -112436402 + AT_rich Low_complexity Low_complexity 1 50 0 1769 170 33 24 chr5 90649803 90650139 -112435393 - MER2 DNA MER2_type -6 339 1 23 33 0 0 chr5 90650164 90650194 -112435338 + AT_rich Low_complexity Low_complexity 1 30 0 240 363 21 26 chr5 90650272 90650340 -112435192 + MIR3 SINE MIR 16 83 -125 2436 185 75 4 chr5 90650340 90650848 -112434684 - MER44D DNA MER2_type -3 602 4 240 363 21 26 chr5 90650848 90650969 -112434563 + MIR3 SINE MIR 83 204 -4 486 249 11 17 chr5 90650999 90651180 -112434352 - L1MC5 LINE L1 -30 7931 7752 4910 158 71 17 chr5 90651297 90652257 -112433275 - L1MD2 LINE L1 0 6359 5348 333 0 0 0 chr5 90653144 90653181 -112432351 + (CA)n Simple_repeat Simple_repeat 2 38 0 853 295 43 59 chr5 90653615 90654177 -112431355 + L1ME LINE L1 5266 5818 -303 183 162 0 0 chr5 90654298 90654335 -112431197 + (TG)n Simple_repeat Simple_repeat 1 37 0 210 71 0 0 chr5 90658637 90658665 -112426867 + (CATGT)n Simple_repeat Simple_repeat 1 28 0 1987 96 45 10 chr5 90662121 90662412 -112423120 + AluSx SINE Alu 1 301 -11 26 64 0 0 chr5 90663169 90663216 -112422316 + AT_rich Low_complexity Low_complexity 1 47 0 193 295 146 70 chr5 90663281 90663596 -112421936 - L2 LINE L2 -1 3271 2933 579 288 36 45 chr5 90663727 90663949 -112421583 + MIR SINE MIR 5 224 -38 397 288 80 0 chr5 90663980 90664105 -112421427 - MIR SINE MIR -78 184 50 273 143 0 0 chr5 90664990 90665032 -112420500 + L2 LINE L2 3270 3311 -2 331 264 141 110 chr5 90665947 90666246 -112419286 - MARNA DNA Mariner -239 347 40 883 145 0 0 chr5 90666780 90666904 -112418628 - FLAM_C SINE Alu -19 124 1 724 91 83 8 chr5 90666919 90667040 -112418492 + L1MB8 LINE L1 6042 6171 -7 778 219 39 60 chr5 90667204 90667332 -112418200 + L2 LINE L2 3063 3185 -128 294 29 0 0 chr5 90667332 90667367 -112418165 + (CA)n Simple_repeat Simple_repeat 1 35 0 778 219 39 60 chr5 90667367 90667471 -112418061 + L2 LINE L2 3185 3290 -23 1091 119 0 40 chr5 90668940 90669117 -112416415 + L1PA7 LINE L1 5970 6139 -15 229 67 22 22 chr5 90669248 90669293 -112416239 + (TA)n Simple_repeat Simple_repeat 2 46 0 25 0 0 0 chr5 90669607 90669632 -112415900 + AT_rich Low_complexity Low_complexity 1 25 0 351 0 0 0 chr5 90721477 90721516 -112364016 + (CA)n Simple_repeat Simple_repeat 2 40 0 853 295 43 59 chr5 90721950 90722512 -112363020 + L1ME LINE L1 5266 5818 -303 183 162 0 0 chr5 90722633 90722670 -112362862 + (TG)n Simple_repeat Simple_repeat 1 37 0 210 71 0 0 chr5 90726962 90726990 -112358542 + (CATGT)n Simple_repeat Simple_repeat 1 28 0 1987 96 45 10 chr5 90730446 90730737 -112354795 + AluSx SINE Alu 1 301 -11 26 64 0 0 chr5 90731494 90731541 -112353991 + AT_rich Low_complexity Low_complexity 1 47 0 193 295 146 70 chr5 90731606 90731921 -112353611 - L2 LINE L2 -1 3271 2933 579 288 36 45 chr5 90732052 90732274 -112353258 + MIR SINE MIR 5 224 -38 397 288 80 0 chr5 90732305 90732430 -112353102 - MIR SINE MIR -78 184 50 273 143 0 0 chr5 90733315 90733357 -112352175 + L2 LINE L2 3270 3311 -2 331 264 141 110 chr5 90734272 90734571 -112350961 - MARNA DNA Mariner -239 347 40 883 145 0 0 chr5 90735104 90735228 -112350304 - FLAM_C SINE Alu -19 124 1 724 91 83 8 chr5 90735243 90735364 -112350168 + L1MB8 LINE L1 6042 6171 -7 778 219 39 60 chr5 90735528 90735656 -112349876 + L2 LINE L2 3063 3185 -128 294 29 0 0 chr5 90735656 90735691 -112349841 + (CA)n Simple_repeat Simple_repeat 1 35 0 778 219 39 60 chr5 90735691 90735795 -112349737 + L2 LINE L2 3185 3290 -23 264 149 0 0 chr5 90736346 90736393 -112349139 + (CA)n Simple_repeat Simple_repeat 2 48 0 459 307 156 10 chr5 90736899 90737104 -112348428 - MIR SINE MIR -8 254 20 460 309 22 29 chr5 90738644 90738665 -112346867 + L2 LINE L2 3134 3154 -118 2339 131 3 5 chr5 90738665 90739032 -112346500 - MER47A DNA MER2_type 0 366 1 460 309 22 29 chr5 90739032 90739149 -112346383 + L2 LINE L2 3154 3271 -1 26 50 0 0 chr5 90739454 90739494 -112346038 + AT_rich Low_complexity Low_complexity 1 40 0 293 186 14 0 chr5 90742121 90742191 -112343341 - L1MC5 LINE L1 -186 7775 7705 2643 185 18 0 chr5 90742196 90742689 -112342843 + L1MD1 LINE L1 5688 6189 -53 734 181 0 8 chr5 90742691 90742818 -112342714 - AluJo SINE Alu -177 135 10 315 162 68 0 chr5 90742818 90742892 -112342640 + L1MD1 LINE L1 6164 6242 0 3154 169 66 68 chr5 90742909 90743892 -112341640 - L1MC5 LINE L1 -268 7693 6713 611 324 50 5 chr5 90743910 90744129 -112341403 + MIR SINE MIR 34 262 0 1243 209 38 0 chr5 90744368 90744631 -112340901 + ORSL DNA AcHobo 2 274 -1 203 239 23 80 chr5 90745465 90745553 -112339979 - L2 LINE L2 -538 2776 2694 1885 142 42 0 chr5 90746375 90746664 -112338868 - AluSx SINE Alu -11 301 1 764 198 0 0 chr5 90746809 90746935 -112338597 + FLAM_A SINE Alu 1 126 -7 2052 99 6 54 chr5 90747005 90747318 -112338214 + AluSx SINE Alu 1 298 -14 2351 77 0 29 chr5 90747357 90747670 -112337862 - AluSq SINE Alu -9 304 1 28 29 0 0 chr5 90748235 90748270 -112337262 + AT_rich Low_complexity Low_complexity 1 35 0 2119 139 0 3 chr5 90749398 90749707 -112335825 - AluSx SINE Alu -4 308 1 241 273 0 0 chr5 90749788 90749843 -112335689 + Charlie8 DNA MER1_type 2355 2409 -8 751 252 89 70 chr5 90749967 90750275 -112335257 - L1ME4a LINE L1 -2 6119 5818 2458 77 3 10 chr5 90750275 90750586 -112334946 + AluY SINE Alu 3 311 0 751 252 89 70 chr5 90750586 90750903 -112334629 - L1ME4a LINE L1 -303 5818 5482 672 291 46 5 chr5 90751255 90751451 -112334081 - MIR SINE MIR -55 207 4 567 258 56 75 chr5 90752246 90752498 -112333034 + MIR SINE MIR 16 262 0 23 33 0 0 chr5 90753544 90753574 -112331958 + AT_rich Low_complexity Low_complexity 1 30 0 4823 191 18 17 chr5 90755317 90757112 -112328420 - L1MB7 LINE L1 -178 6006 4214 534 129 0 0 chr5 90757215 90757300 -112328232 + (CCTA)n Simple_repeat Simple_repeat 2 86 0 507 56 0 0 chr5 90757487 90757558 -112327974 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 1433 166 19 39 chr5 90758073 90758332 -112327200 - AluSx SINE Alu -48 264 11 255 271 47 0 chr5 90759310 90759395 -112326137 - L1MB7 LINE L1 -3784 2362 2274 3169 212 66 20 chr5 90759449 90760236 -112325296 - L1ME1 LINE L1 -18 6082 5260 1137 139 0 22 chr5 90760246 90760426 -112325106 - FRAM SINE Alu -2 174 1 3603 231 70 29 chr5 90760451 90760647 -112324885 - L1ME1 LINE L1 -824 5256 5070 2052 112 18 0 chr5 90760647 90760967 -112324565 - AluSx SINE Alu 0 325 1 3603 231 70 29 chr5 90760967 90761947 -112323585 - L1ME1 LINE L1 -1010 5070 4030 1484 173 136 9 chr5 90761952 90762275 -112323257 + MLT2D LTR ERVL 3 366 -48 276 269 135 19 chr5 90762300 90762456 -112323076 - L1ME1 LINE L1 -5654 416 243 2279 105 3 0 chr5 90762729 90763024 -112322508 + AluSx SINE Alu 1 296 -16 267 294 66 7 chr5 90763207 90763343 -112322189 - L1ME1 LINE L1 -5925 145 2 317 236 79 47 chr5 90763403 90763530 -112322002 - L1MDa LINE L1 -3944 2596 2466 530 234 161 32 chr5 90763692 90763910 -112321622 - L2 LINE L2 -5 3308 3063 188 348 29 14 chr5 90764057 90764126 -112321406 - L2 LINE L2 -41 3231 3162 198 284 76 81 chr5 90764333 90764530 -112321002 - L2 LINE L2 -624 2690 2495 789 323 213 37 chr5 90764554 90766125 -112319407 - L2 LINE L2 -938 2376 530 2364 70 0 10 chr5 90766150 90766449 -112319083 + AluY SINE Alu 3 298 -13 1902 231 105 59 chr5 90766449 90767501 -112318031 - L1ME3A LINE L1 -8 6145 5044 953 193 62 0 chr5 90767512 90767704 -112317828 + MER3 DNA MER1_type 1 204 -5 1362 263 71 18 chr5 90767750 90768310 -112317222 - L1ME3A LINE L1 -1135 4994 4405 * 1721 278 59 16 chr5 90768294 90768970 -112316562 - L1ME3A LINE L1 -1976 4153 3449 348 298 104 24 chr5 90769008 90769063 -112316469 - L1ME3A LINE L1 -4923 1387 1338 1853 199 11 14 chr5 90769063 90769429 -112316103 + MLT1A1 LTR MaLR 1 365 0 348 298 104 24 chr5 90769429 90770010 -112315522 - L1ME3A LINE L1 -4972 1338 700 246 250 0 56 chr5 90770058 90770130 -112315402 - L1ME3A LINE L1 -5491 628 561 387 276 151 40 chr5 90770449 90770674 -112314858 - L2 LINE L2 -2769 545 296 278 211 13 40 chr5 90770713 90770789 -112314743 + L3 LINE CR1 1503 1576 -1 419 335 46 5 chr5 90771206 90771400 -112314132 + L2 LINE L2 202 403 -2911 945 303 164 30 chr5 90771488 90772231 -112313301 + L2 LINE L2 860 1702 -1612 1144 249 15 18 chr5 90772241 90772567 -112312965 + L1MC/D LINE L1 5328 5652 -2156 889 296 78 20 chr5 90772570 90772915 -112312617 + L2 LINE L2 2107 2471 -843 182 366 37 0 chr5 90773480 90773562 -112311970 + L2 LINE L2 3177 3261 -52 21 36 0 0 chr5 90774309 90774337 -112311195 + AT_rich Low_complexity Low_complexity 1 28 0 344 235 0 118 chr5 90774632 90774751 -112310781 + L2 LINE L2 3168 3272 0 1101 195 195 83 chr5 90774779 90775226 -112310306 - MLT1F1 LTR MaLR -8 559 63 24 32 0 0 chr5 90775291 90775322 -112310210 + AT_rich Low_complexity Low_complexity 1 31 0 2356 71 10 7 chr5 90775436 90775733 -112309799 + AluSq SINE Alu 1 298 -15 2371 89 0 0 chr5 90776557 90776849 -112308683 + AluSg SINE Alu 1 292 -18 480 297 34 7 chr5 90776941 90777089 -112308443 + MIR SINE MIR 5 156 -106 233 288 82 0 chr5 90777108 90777181 -112308351 - MIR SINE MIR -4 258 180 206 163 41 0 chr5 90777347 90777396 -112308136 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 219 158 0 0 chr5 90777436 90777474 -112308058 - MIR SINE MIR -54 208 171 1752 167 7 14 chr5 90777475 90777789 -112307743 + AluJo SINE Alu 1 312 0 323 43 0 22 chr5 90777835 90777881 -112307651 + (CA)n Simple_repeat Simple_repeat 2 46 0 500 321 88 50 chr5 90779623 90779962 -112305570 - L2 LINE L2 -1 3271 2920 2464 62 0 0 chr5 90780052 90780344 -112305188 - AluY SINE Alu -19 292 1 628 129 0 0 chr5 90780418 90780511 -112305021 - AluY SINE Alu -18 293 201 2018 141 13 3 chr5 90780535 90780839 -112304693 - AluSg SINE Alu -3 307 1 210 286 0 0 chr5 90780868 90780931 -112304601 + L2 LINE L2 2911 2973 -299 876 277 25 4 chr5 90782011 90782246 -112303286 + MIR SINE MIR 4 243 -19 30 0 0 0 chr5 90786704 90786734 -112298798 + AT_rich Low_complexity Low_complexity 1 30 0 916 263 97 21 chr5 90786803 90787092 -112298440 + Charlie2 DNA MER1_type 1 311 -2551 2073 132 7 3 chr5 90787154 90787458 -112298074 - AluSx SINE Alu -7 305 1 596 285 75 0 chr5 90787484 90787670 -112297862 + MIR SINE MIR 5 204 -58 1910 151 7 13 chr5 90787706 90788004 -112297528 + AluJb SINE Alu 1 296 -16 1387 197 160 29 chr5 90788048 90788597 -112296935 + Charlie2 DNA MER1_type 2242 2862 0 21 36 0 0 chr5 90788646 90788674 -112296858 + AT_rich Low_complexity Low_complexity 1 28 0 480 165 18 110 chr5 90789558 90789667 -112295865 - MER2 DNA MER2_type -246 99 1 492 304 87 54 chr5 90790057 90790234 -112295298 + L1ME4a LINE L1 5533 5703 -418 2445 72 0 7 chr5 90790234 90790540 -112294992 + AluSc SINE Alu 1 304 -5 492 304 87 54 chr5 90790540 90790731 -112294801 + L1ME4a LINE L1 5703 5913 -208 229 347 167 7 chr5 90792189 90792333 -112293199 + MIR SINE MIR 48 214 -48 444 333 101 46 chr5 90792340 90792815 -112292717 + L2 LINE L2 2476 2976 -338 1096 242 32 92 chr5 90793541 90794094 -112291438 - MER34 LTR ERV1 0 542 23 365 278 71 0 chr5 90794403 90794529 -112291003 + MIR SINE MIR 72 206 -56 247 296 120 19 chr5 90795040 90795148 -112290384 - MER5A DNA MER1_type -64 125 7 2309 98 3 0 chr5 90797144 90797440 -112288092 + AluSx SINE Alu 1 297 -15 387 208 57 57 chr5 90798346 90798452 -112287080 + L2 LINE L2 3190 3295 -18 190 387 16 0 chr5 90798484 90798546 -112286986 + L2 LINE L2 3210 3272 0 610 298 167 21 chr5 90799105 90799441 -112286091 - L2 LINE L2 -8 3264 2880 6346 117 21 8 chr5 90799466 90800586 -112284946 + L1MA4 LINE L1 5158 6293 -7 245 372 32 0 chr5 90800725 90800819 -112284713 + L2 LINE L2 3198 3294 -19 1611 272 63 37 chr5 90800928 90801550 -112283982 + L2 LINE L2 2449 3096 -217 1028 276 114 39 chr5 90801682 90803610 -112281922 + L1MEd LINE L1 576 2653 -3476 280 222 9 9 chr5 90803670 90803778 -112281754 + L1MEd LINE L1 3069 3176 -2953 397 234 212 0 chr5 90804142 90804279 -112281253 + MIR SINE MIR 64 229 -33 2158 127 3 0 chr5 90805854 90806153 -112279379 - AluSx SINE Alu -12 300 1 711 195 23 0 chr5 90806189 90806317 -112279215 + FLAM_C SINE Alu 1 131 -2 28 29 0 0 chr5 90806318 90806353 -112279179 + AT_rich Low_complexity Low_complexity 1 35 0 2499 242 60 18 chr5 90806366 90807672 -112277860 - L1M4c LINE L1 -4423 2715 1193 347 325 40 7 chr5 90807741 90807892 -112277640 - L1M4c LINE L1 -5668 1187 1032 308 335 27 27 chr5 90808243 90808464 -112277068 - L1M4c LINE L1 -6618 241 21 42 86 0 0 chr5 90808599 90808704 -112276828 + AT_rich Low_complexity Low_complexity 1 105 0 200 208 0 0 chr5 90808962 90809010 -112276522 + (TTTAA)n Simple_repeat Simple_repeat 3 50 0 878 262 36 24 chr5 90809282 90809534 -112275998 - MIR SINE MIR -2 260 6 893 238 15 15 chr5 90810099 90810301 -112275231 - MLT1A1 LTR MaLR 0 365 164 510 290 61 57 chr5 90810353 90810632 -112274900 + L2 LINE L2 3026 3305 -8 632 272 52 56 chr5 90811128 90811452 -112274080 + MER102b DNA MER1_type 11 333 -8 243 320 0 0 chr5 90811710 90811788 -112273744 + GA-rich Low_complexity Low_complexity 1 78 0 939 279 40 4 chr5 90812545 90812796 -112272736 - MIR SINE MIR 0 262 3 1770 129 80 49 chr5 90813375 90813700 -112271832 + MER1B DNA MER1_type 1 335 -2 1854 160 0 7 chr5 90814057 90814364 -112271168 + AluJb SINE Alu 1 305 -7 297 100 0 0 chr5 90814672 90814722 -112270810 + (TG)n Simple_repeat Simple_repeat 2 51 0 400 246 67 30 chr5 90814912 90815046 -112270486 + MIR SINE MIR 64 202 -60 200 247 169 0 chr5 90815290 90815367 -112270165 + MER5B DNA MER1_type 18 107 -71 400 247 12 0 chr5 90816413 90816498 -112269034 + MIR3 SINE MIR 82 167 -41 187 319 62 53 chr5 90816567 90816680 -112268852 + MIR SINE MIR 75 188 -74 354 208 13 13 chr5 90818149 90818226 -112267306 + MIR SINE MIR 74 150 -58 1859 172 3 10 chr5 90818268 90818571 -112266961 - AluJo SINE Alu -11 301 1 437 167 19 37 chr5 90818588 90818696 -112266836 - MER112 DNA MER1_type -91 169 64 271 154 31 0 chr5 90818696 90818761 -112266771 + (TA)n Simple_repeat Simple_repeat 1 67 0 228 288 15 0 chr5 90819491 90819557 -112265975 + L2 LINE L2 3206 3272 0 1509 202 74 16 chr5 90820332 90820698 -112264834 + MSTD LTR MaLR 8 394 -2 460 234 181 37 chr5 90820998 90821319 -112264213 - L1ME4a LINE L1 -37 6084 5718 373 272 78 10 chr5 90821320 90821423 -112264109 - L2 LINE L2 -8 3264 3155 2400 75 7 10 chr5 90821437 90821743 -112263789 + AluSx SINE Alu 1 305 -7 307 271 196 0 chr5 90821769 90821902 -112263630 - L1ME4a LINE L1 -437 5684 5526 253 259 65 9 chr5 90822190 90822298 -112263234 - L1MC5 LINE L1 -41 7920 7807 276 30 0 0 chr5 90822911 90822944 -112262588 + (CA)n Simple_repeat Simple_repeat 2 34 0 2301 107 0 3 chr5 90823517 90823827 -112261705 - AluSx SINE Alu -1 311 3 2376 76 0 0 chr5 90823864 90824154 -112261378 + AluY SINE Alu 1 290 -21 22 35 0 0 chr5 90825768 90825797 -112259735 + AT_rich Low_complexity Low_complexity 1 29 0 2522 235 126 17 chr5 90825801 90826864 -112258668 - L1MD2 LINE L1 -14 6345 5175 908 193 31 0 chr5 90826868 90827029 -112258503 - FRAM SINE Alu 0 166 1 3615 71 31 2 chr5 90827056 90827532 -112258000 - LTR2B LTR ERV1 0 490 1 23245 116 9 4 chr5 90827532 90831057 -112254475 - Harlequin LTR ERV1 0 6896 3352 6183 53 36 24 chr5 90831056 90832047 -112253485 - Harlequin LTR ERV1 -4322 2574 1572 * 4403 77 8 29 chr5 90832032 90832686 -112252846 - Harlequin LTR ERV1 -5995 901 262 * 2563 86 5 18 chr5 90832681 90833066 -112252466 - Harlequin LTR ERV1 -6516 380 1 * 3446 65 67 2 chr5 90833066 90833526 -112252006 - LTR2B LTR ERV1 0 490 1 595 139 0 56 chr5 90833537 90833645 -112251887 - AluJ/FLAM SINE Alu -210 102 1 817 223 117 35 chr5 90833653 90834020 -112251512 - L1MD2 LINE L1 -966 5180 4784 236 268 56 61 chr5 90834717 90834916 -112250616 - L2 LINE L2 -326 2946 2748 507 208 48 24 chr5 90836519 90836644 -112248888 + FLAM_A SINE Alu 5 132 -1 2032 114 23 7 chr5 90836687 90836986 -112248546 + AluSx SINE Alu 1 304 -8 246 261 29 0 chr5 90837022 90837091 -112248441 - MER116 DNA Mariner -7 73 3 220 366 129 0 chr5 90838610 90838703 -112246829 + MIR SINE MIR 2 106 -156 2200 113 0 0 chr5 90838711 90839022 -112246510 - AluSx SINE Alu -1 311 1 527 265 41 71 chr5 90839087 90839381 -112246151 - L2 LINE L2 0 3313 3029 3117 277 153 25 chr5 90839390 90840814 -112244718 - L2 LINE L2 -399 2915 1309 612 300 38 25 chr5 90840839 90841076 -112244456 - MIR SINE MIR -21 241 2 322 294 143 0 chr5 90841081 90841200 -112244332 - L2 LINE L2 -2001 1313 1178 1626 134 52 30 chr5 90841204 90841387 -112244145 + L1MA8 LINE L1 5900 6078 -213 2348 149 45 17 chr5 90841387 90841809 -112243723 + Tigger2a DNA MER2_type 1 434 0 1626 134 52 30 chr5 90841809 90841991 -112243541 + L1MA8 LINE L1 6078 6273 -18 31 0 0 0 chr5 90841995 90842026 -112243506 + AT_rich Low_complexity Low_complexity 1 31 0 336 302 96 27 chr5 90842054 90842354 -112243178 + L1M4 LINE L1 4947 5225 -921 2376 93 0 0 chr5 90842354 90842656 -112242876 + AluSx SINE Alu 1 302 -10 336 302 96 27 chr5 90842656 90842723 -112242809 + L1M4 LINE L1 5220 5341 -800 2176 114 0 35 chr5 90842723 90843038 -112242494 + AluSx SINE Alu 1 304 -8 607 266 40 40 chr5 90843141 90843438 -112242094 - L1M4 LINE L1 -2510 3636 3340 242 116 23 0 chr5 90843441 90843484 -112242048 + (TA)n Simple_repeat Simple_repeat 1 44 0 985 224 67 31 chr5 90843484 90843754 -112241778 - L1M4 LINE L1 -2634 3512 3222 1844 181 143 34 chr5 90843754 90843994 -112241538 - MLT2B1 LTR ERVL 0 520 308 180 0 0 0 chr5 90843994 90844014 -112241518 + (AGATG)n Simple_repeat Simple_repeat 1 20 0 1844 181 143 34 chr5 90844014 90844242 -112241290 - MLT2B1 LTR ERVL -212 308 1 985 224 67 31 chr5 90844242 90844359 -112241173 - L1M4 LINE L1 -2924 3222 3111 4703 150 41 13 chr5 90844519 90845393 -112240139 + MER54A LTR ERVL 3 901 0 749 201 47 0 chr5 90845394 90845608 -112239924 - L1M4 LINE L1 -3090 3056 2833 437 252 0 0 chr5 90845610 90845721 -112239811 - L1M4 LINE L1 -3432 2714 2604 684 323 81 21 chr5 90846085 90846466 -112239066 - L2 LINE L2 -389 2925 2522 484 227 40 33 chr5 90846529 90846679 -112238853 - MIR SINE MIR -8 254 104 2432 66 3 7 chr5 90847838 90848141 -112237391 - AluSg SINE Alu -8 302 1 308 313 39 67 chr5 90848408 90848587 -112236945 + L3b LINE CR1 1289 1462 -121 23 0 0 0 chr5 90848754 90848777 -112236755 + AT_rich Low_complexity Low_complexity 1 23 0 188 214 18 0 chr5 90848869 90848925 -112236607 + A-rich Low_complexity Low_complexity 2 58 0 2240 113 0 10 chr5 90849253 90849563 -112235969 + AluSx SINE Alu 1 307 -5 192 341 187 0 chr5 90850010 90850133 -112235399 + L2 LINE L2 3127 3272 0 380 282 124 48 chr5 90850598 90850807 -112234725 - L2 LINE L2 0 3313 3089 304 297 36 57 chr5 90850817 90851009 -112234523 - L2 LINE L2 -356 2958 2771 2154 185 47 14 chr5 90851347 90851839 -112233693 + LTR40a LTR ERVL 12 519 0 2377 84 3 3 chr5 90852150 90852459 -112233073 - AluSg SINE Alu -1 309 1 356 201 11 21 chr5 90852647 90852741 -112232791 + MER33 DNA MER1_type 1 79 -88 809 159 0 8 chr5 90852746 90852872 -112232660 + FLAM_C SINE Alu 7 131 -12 888 156 58 13 chr5 90852884 90853109 -112232423 + MER33 DNA MER1_type 129 363 0 446 271 155 39 chr5 90853125 90853280 -112232252 + MER5A DNA MER1_type 9 181 -8 738 200 16 5 chr5 90853302 90853487 -112232045 + MER53 DNA DNA 1 187 -2 222 287 21 21 chr5 90853548 90853642 -112231890 + GA-rich Low_complexity Low_complexity 6 99 0 2273 87 19 10 chr5 90854177 90854486 -112231046 + AluSx SINE Alu 1 312 0 414 239 141 38 chr5 90854487 90854671 -112230861 - MIR SINE MIR -54 208 6 735 311 119 16 chr5 90856649 90857076 -112228456 - L2 LINE L2 -7 3306 2836 347 216 200 24 chr5 90857370 90857495 -112228037 - HAL1 LINE L1 -7 2500 2354 563 271 32 69 chr5 90857535 90857819 -112227713 - MLT1I LTR MaLR -38 371 133 4426 155 91 17 chr5 90857819 90858586 -112226946 - LTR1B LTR ERV1 0 826 3 563 271 32 69 chr5 90858586 90858652 -112226880 - MLT1I LTR MaLR -276 133 66 782 240 160 68 chr5 90858849 90859362 -112226170 - HAL1 LINE L1 -303 2204 1645 2602 240 82 28 chr5 90859442 90859881 -112225651 + L1ME1 LINE L1 4978 5392 -774 3355 27 21 0 chr5 90859881 90860278 -112225254 + L1PA3 LINE L1 5771 6175 0 2602 240 82 28 chr5 90860278 90860737 -112224795 + L1ME1 LINE L1 5392 5946 -220 2472 81 3 3 chr5 90860737 90861045 -112224487 + AluSp SINE Alu 1 308 -5 2602 240 82 28 chr5 90861045 90861274 -112224258 + L1ME1 LINE L1 5946 6161 -5 643 240 96 37 chr5 90861718 90861989 -112223543 + L1MC5 LINE L1 7640 7926 -35 * 657 266 77 18 chr5 90861983 90862269 -112223263 + L1ME4a LINE L1 5601 5903 -218 266 229 31 62 chr5 90862539 90862635 -112222897 + L2 LINE L2 3219 3311 -2 1988 138 0 0 chr5 90862665 90862983 -112222549 + AluSx SINE Alu 1 318 0 21 36 0 0 chr5 90863686 90863714 -112221818 + AT_rich Low_complexity Low_complexity 1 28 0 1549 156 39 4 chr5 90863778 90864034 -112221498 - L1PA16 LINE L1 -11 6155 5891 384 183 0 0 chr5 90864231 90864302 -112221230 - L1MC2 LINE L1 -216 6128 6058 2220 91 7 14 chr5 90864812 90865108 -112220424 + AluSx SINE Alu 1 294 -18 435 19 0 0 chr5 90865763 90865815 -112219717 + (TG)n Simple_repeat Simple_repeat 2 53 0 231 36 0 0 chr5 90866292 90866320 -112219212 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2196 96 0 4 chr5 90866321 90866601 -112218931 - AluSq SINE Alu -32 281 3 236 239 220 18 chr5 90866664 90866773 -112218759 + MIR SINE MIR 23 153 -55 207 307 27 0 chr5 90866799 90866874 -112218658 - MIR SINE MIR -18 244 168 2123 149 0 0 chr5 90867837 90868145 -112217387 + AluSx SINE Alu 1 308 -4 2077 232 24 30 chr5 90868152 90868725 -112216807 - L1ME1 LINE L1 -117 6049 5480 288 189 45 99 chr5 90868936 90869047 -112216485 - LTR68 LTR ERV1 -108 632 528 301 306 64 40 chr5 90869217 90869390 -112216142 - LTR68 LTR ERV1 -561 179 3 982 226 38 28 chr5 90869408 90869823 -112215709 - L1ME1 LINE L1 -697 5473 5055 193 146 73 91 chr5 90870043 90870098 -112215434 - L2 LINE L2 0 3272 3219 375 242 40 94 chr5 90870738 90870887 -112214645 - MER103 DNA DNA -2 164 24 213 39 0 0 chr5 90871114 90871140 -112214392 + (TTA)n Simple_repeat Simple_repeat 2 27 0 767 266 59 49 chr5 90871159 90871602 -112213930 + LTR16C LTR ERVL 1 491 0 307 267 35 0 chr5 90871620 90871736 -112213796 - L1ME4a LINE L1 -38 6083 5964 463 292 86 0 chr5 90871831 90871985 -112213547 + MIR SINE MIR 37 204 -58 306 218 236 9 chr5 90873404 90873514 -112212018 + MIR SINE MIR 2 136 -126 233 347 14 14 chr5 90873719 90873791 -112211741 - MIR SINE MIR -160 102 31 279 0 0 0 chr5 90873798 90873829 -112211703 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr5 90873829 90873857 -112211675 + AT_rich Low_complexity Low_complexity 1 28 0 222 191 0 0 chr5 90873857 90873904 -112211628 + (TATG)n Simple_repeat Simple_repeat 2 48 0 4087 150 10 71 chr5 90874077 90874486 -112211046 + L1MB3 LINE L1 5444 5784 -399 1721 122 35 42 chr5 90874486 90874774 -112210758 + AluJb SINE Alu 5 290 -22 4087 150 10 71 chr5 90874774 90875151 -112210381 + L1MB3 LINE L1 5784 6182 -1 377 270 70 0 chr5 90875715 90875815 -112209717 - Charlie8 DNA MER1_type -2197 220 114 2438 98 0 0 chr5 90875975 90876282 -112209250 + AluSq SINE Alu 1 307 -6 350 62 0 0 chr5 90876866 90876914 -112208618 - MADE1 DNA Mariner 0 80 33 653 260 34 11 chr5 90877040 90877217 -112208315 + MIR SINE MIR 22 202 -60 522 172 0 0 chr5 90878374 90878473 -112207059 + GA-rich Low_complexity Low_complexity 2 100 0 251 290 14 14 chr5 90879179 90879248 -112206284 + LTR67 LTR ERVL 131 199 -358 363 262 83 14 chr5 90879401 90879546 -112205986 + LTR67 LTR ERVL 400 554 -3 449 282 48 0 chr5 90879755 90879879 -112205653 + MER94 DNA DNA 2 131 -3 1630 210 0 13 chr5 90880131 90880436 -112205096 + AluJo SINE Alu 1 301 -11 1910 150 10 25 chr5 90880438 90880752 -112204780 + AluJo SINE Alu 1 309 -3 621 305 44 73 chr5 90881038 90881625 -112203907 + ERVL LTR ERVL 994 1563 -4201 695 316 48 45 chr5 90882627 90882708 -112202824 - L2 LINE L2 -1002 2312 2233 1572 297 74 2 chr5 90882708 90883166 -112202366 + LTR16C LTR ERVL 1 491 0 695 316 48 45 chr5 90883166 90883502 -112202030 - L2 LINE L2 -1081 2233 1894 592 293 68 45 chr5 90883514 90883869 -112201663 + LTR33 LTR ERVL 159 521 0 189 0 0 0 chr5 90885632 90885653 -112199879 + (T)n Simple_repeat Simple_repeat 1 21 0 490 215 74 61 chr5 90886554 90886717 -112198815 - MER69 DNA AcHobo 0 2526 2362 379 247 134 0 chr5 90886712 90886809 -112198723 - MER69 DNA AcHobo -1063 163 54 * 270 0 0 0 chr5 90886810 90886840 -112198692 + (TG)n Simple_repeat Simple_repeat 1 30 0 3777 129 54 5 chr5 90886845 90887435 -112198097 - L1PA16 LINE L1 -2 6164 5546 602 240 19 26 chr5 90887438 90887592 -112197940 - MLT2F LTR ERVL -60 603 451 837 150 19 56 chr5 90887592 90887752 -112197780 - MER20 DNA MER1_type -65 154 1 1256 233 8 8 chr5 90887759 90888021 -112197511 - ERVL LTR ERVL -744 5020 4759 3210 115 69 4 chr5 90888384 90888864 -112196668 + MER9 LTR ERVK 1 511 0 358 250 0 0 chr5 90889672 90889752 -112195780 - MER116 DNA Mariner 0 80 1 24 0 0 0 chr5 90892639 90892663 -112192869 + AT_rich Low_complexity Low_complexity 1 24 0 348 304 96 9 chr5 90893986 90894101 -112191431 - L2 LINE L2 -2 3270 3146 2238 121 0 0 chr5 90895290 90895597 -112189935 - AluSx SINE Alu -5 307 1 303 303 78 28 chr5 90895638 90895780 -112189752 - MIR3 SINE MIR -57 151 3 244 283 0 0 chr5 90896930 90896983 -112188549 + polypyrimidine Low_complexity Low_complexity 3 55 0 2128 154 0 0 chr5 90897579 90897885 -112187647 - AluSx SINE Alu -6 306 1 26 0 0 0 chr5 90898034 90898060 -112187472 + AT_rich Low_complexity Low_complexity 1 26 0 1915 158 0 16 chr5 90898153 90898456 -112187076 + AluJb SINE Alu 1 298 -14 1031 201 0 0 chr5 90899091 90899270 -112186262 + AluJo SINE Alu 121 299 -13 280 294 37 46 chr5 90900571 90900680 -112184852 + L2 LINE L2 3161 3268 -4 43 47 0 0 chr5 90902107 90902171 -112183361 + AT_rich Low_complexity Low_complexity 1 64 0 255 267 17 0 chr5 90902638 90902698 -112182834 - L2 LINE L2 -1 3271 3211 369 0 0 0 chr5 90902880 90902921 -112182611 + (TG)n Simple_repeat Simple_repeat 1 41 0 588 363 75 32 chr5 90903053 90903075 -112182457 + L2 LINE L2 2174 2194 -1120 2338 69 6 41 chr5 90903075 90903395 -112182137 - AluY SINE Alu -2 309 1 588 363 75 32 chr5 90903395 90903934 -112181598 + L2 LINE L2 2194 2759 -555 247 284 74 0 chr5 90903948 90904043 -112181489 - MER112 DNA MER1_type -11 249 148 815 170 0 14 chr5 90904066 90904207 -112181325 - FLAM_C SINE Alu -3 140 2 252 200 107 0 chr5 90904226 90904301 -112181231 - MER112 DNA MER1_type -137 123 41 184 300 107 40 chr5 90904750 90904900 -112180632 + L2 LINE L2 2887 3046 -226 2153 121 10 3 chr5 90905674 90905981 -112179551 + AluSq SINE Alu 1 309 -4 494 306 88 6 chr5 90906113 90906283 -112179249 - MIR SINE MIR -51 211 28 1914 161 0 3 chr5 90907769 90908067 -112177465 - AluJb SINE Alu -13 299 3 187 391 36 22 chr5 90912697 90912835 -112172697 - L2 LINE L2 0 3272 3133 1921 89 97 0 chr5 90913936 90914205 -112171327 + AluSc SINE Alu 1 295 -14 214 167 0 0 chr5 90915772 90915808 -112169724 + (TG)n Simple_repeat Simple_repeat 1 36 0 485 308 106 10 chr5 90916506 90916714 -112168818 - MIR SINE MIR -10 252 25 300 273 31 47 chr5 90917352 90917480 -112168052 + MIR3 SINE MIR 13 138 -70 338 284 49 65 chr5 90917557 90917742 -112167790 + MIR SINE MIR 16 192 -63 472 195 117 39 chr5 90917858 90918012 -112167520 + MER117 DNA MER1_type 1 166 -31 285 29 0 0 chr5 90919167 90919201 -112166331 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 97 0 0 chr5 90919547 90919578 -112165954 + (CA)n Simple_repeat Simple_repeat 2 32 0 297 100 0 0 chr5 90920349 90920399 -112165133 + (TC)n Simple_repeat Simple_repeat 1 50 0 207 282 0 56 chr5 90921379 90921450 -112164082 - L2 LINE L2 -8 3305 3239 698 224 18 24 chr5 90921730 90921900 -112163632 + MIR SINE MIR 63 231 -31 1210 295 192 40 chr5 90922477 90923312 -112162220 + L3 LINE CR1 332 1293 -284 834 293 29 8 chr5 90923467 90923706 -112161826 + MIR SINE MIR 16 259 -3 414 301 73 15 chr5 90924649 90924785 -112160747 + MIR3 SINE MIR 3 146 -62 822 301 37 37 chr5 90925367 90925746 -112159786 - LTR16A1 LTR ERVL 0 457 79 712 247 36 10 chr5 90925746 90925940 -112159592 - MER63A DNA MER1_type -3 207 9 285 250 25 0 chr5 90925948 90926028 -112159504 - LTR16A1 LTR ERVL -375 82 1 387 185 62 85 chr5 90926425 90926555 -112158977 - L1MC5 LINE L1 -47 7914 7788 1672 135 21 90 chr5 90926626 90926753 -112158779 + AluJb SINE Alu 1 135 -177 2193 110 3 0 chr5 90926753 90927061 -112158471 + AluSg SINE Alu 1 309 -1 1672 135 21 90 chr5 90927061 90927266 -112158266 + AluJb SINE Alu 135 310 -2 2388 93 0 6 chr5 90928195 90928506 -112157026 - AluSc SINE Alu 0 309 1 198 118 0 0 chr5 90928940 90928974 -112156558 + (T)n Simple_repeat Simple_repeat 1 34 0 17386 20 3 0 chr5 90928978 90931747 -112153785 - L1HS LINE L1 0 6155 3379 1538 146 101 0 chr5 90931900 90932168 -112153364 - L1MC1 LINE L1 -2 6331 6037 289 265 69 10 chr5 90933119 90933221 -112152311 + MIR SINE MIR 155 262 0 27 0 0 0 chr5 90933289 90933316 -112152216 + AT_rich Low_complexity Low_complexity 1 27 0 826 101 9 0 chr5 90933344 90933453 -112152079 - AluSg SINE Alu -13 299 190 1012 94 0 0 chr5 90933454 90933581 -112151951 - AluSg SINE Alu -183 127 1 2528 73 0 0 chr5 90933592 90933895 -112151637 - AluY SINE Alu -8 303 1 246 276 181 0 chr5 90934135 90934240 -112151292 - L2 LINE L2 -1 3271 3148 1089 165 15 4 chr5 90934422 90934753 -112150779 - MER93b LTR ERV1 -6 367 1 182 176 29 0 chr5 90935239 90935273 -112150259 + L2 LINE L2 3263 3297 -16 21 36 0 0 chr5 90936022 90936050 -112149482 + AT_rich Low_complexity Low_complexity 1 28 0 191 247 59 71 chr5 90936681 90936766 -112148766 + L2 LINE L2 126 209 -3105 321 26 0 0 chr5 90936973 90937011 -112148521 + (TG)n Simple_repeat Simple_repeat 1 38 0 388 296 133 51 chr5 90938085 90938445 -112147087 - MLT1I LTR MaLR -27 423 39 2295 131 73 18 chr5 90938605 90938948 -112146584 - THE1B LTR MaLR -2 362 1 12607 91 9 1 chr5 90938948 90940516 -112145016 - THE1B-int LTR MaLR 0 1580 1 2064 160 73 18 chr5 90940518 90940861 -112144671 - THE1B LTR MaLR -2 362 1 553 215 68 76 chr5 90941813 90941941 -112143591 + MIR SINE MIR 36 161 -101 1581 187 28 7 chr5 90941941 90942230 -112143302 + AluJo SINE Alu 2 296 -16 553 215 68 76 chr5 90942230 90942330 -112143202 + MIR SINE MIR 161 260 -2 364 285 6 0 chr5 90942782 90942884 -112142648 - MER5B DNA MER1_type -16 162 69 293 211 156 39 chr5 90942982 90943110 -112142422 - MLT1I LTR MaLR -4 405 263 299 268 41 31 chr5 90943120 90943217 -112142315 - MLT1I LTR MaLR -266 143 46 182 278 0 0 chr5 90943373 90943409 -112142123 - MIR3 SINE MIR -29 179 144 190 83 0 0 chr5 90944634 90944658 -112140874 + MER5A DNA MER1_type 2 25 -164 204 222 48 32 chr5 90945218 90945281 -112140251 - L3b LINE CR1 -232 1351 1288 383 260 106 74 chr5 90945281 90945631 -112139901 - MLT1K LTR MaLR -7 581 221 212 281 53 0 chr5 90945853 90945910 -112139622 + L2 LINE L2 3153 3212 -60 279 0 0 0 chr5 90948525 90948556 -112136976 + (T)n Simple_repeat Simple_repeat 1 31 0 551 274 59 51 chr5 90949302 90949539 -112135993 - MIR SINE MIR -17 245 7 23 0 0 0 chr5 90949682 90949705 -112135827 + AT_rich Low_complexity Low_complexity 1 23 0 182 229 21 21 chr5 90950496 90950544 -112134988 - L2 LINE L2 -6 3266 3219 251 387 34 17 chr5 90950967 90951086 -112134446 - L2 LINE L2 -5 3267 3147 1775 103 0 0 chr5 90952407 90952641 -112132891 + AluY SINE Alu 77 310 -1 220 179 18 18 chr5 90953026 90953082 -112132450 + (TA)n Simple_repeat Simple_repeat 2 57 0 340 298 31 52 chr5 90953090 90953281 -112132251 + HAL1 LINE L1 922 1108 -1399 1275 261 120 21 chr5 90953289 90953864 -112131668 + HAL1 LINE L1 1154 1785 -722 259 213 16 0 chr5 90954242 90954303 -112131229 + HAL1 LINE L1 2078 2139 -368 279 313 56 19 chr5 90954369 90954529 -112131003 + HAL1b LINE L1 746 911 -437 389 130 14 0 chr5 90955124 90955193 -112130339 - L1ME4a LINE L1 0 6121 6052 297 269 157 0 chr5 90955514 90955622 -112129910 - MER5A DNA MER1_type -6 183 59 513 200 168 0 chr5 90955627 90955759 -112129773 + MER5A DNA MER1_type 4 160 -29 600 235 4 29 chr5 90957511 90957708 -112127824 + L1ME1 LINE L1 5974 6177 -1 180 227 91 0 chr5 90958019 90958063 -112127469 - L2 LINE L2 0 3313 3266 504 208 68 102 chr5 90958768 90959033 -112126499 + MER112 DNA MER1_type 1 256 0 1081 242 160 18 chr5 90959490 90959833 -112125699 + LTR16A1 LTR ERVL 66 457 0 232 217 178 25 chr5 90959838 90959969 -112125563 - MIR SINE MIR -45 217 64 439 350 28 0 chr5 90960718 90960898 -112124634 + MIR SINE MIR 70 254 -8 247 308 56 9 chr5 90961233 90961340 -112124192 + LTR67 LTR ERVL 429 540 -17 186 296 197 0 chr5 90961516 90961587 -112123945 + L2 LINE L2 3229 3313 0 552 259 31 6 chr5 90961695 90961857 -112123675 - MIR SINE MIR -45 217 52 750 274 177 9 chr5 90962013 90962352 -112123180 - MARNA DNA Mariner -17 569 174 477 327 77 57 chr5 90962392 90962627 -112122905 - L2 LINE L2 -37 3235 2989 1057 201 18 23 chr5 90962627 90962846 -112122686 - MER20 DNA MER1_type -1 218 1 477 327 77 57 chr5 90962846 90962959 -112122573 - L2 LINE L2 -283 2989 2880 307 169 46 0 chr5 90963385 90963450 -112122082 - MER20 DNA MER1_type -57 162 95 285 246 115 25 chr5 90964177 90964299 -112121233 + L2 LINE L2 3173 3305 -8 2273 151 13 39 chr5 90964318 90964702 -112120830 - MSTB1 LTR MaLR -13 419 46 219 366 45 18 chr5 90965885 90965997 -112119535 + L2 LINE L2 3139 3253 -19 864 228 0 26 chr5 90966946 90967135 -112118397 + MIR SINE MIR 78 261 -1 977 209 70 21 chr5 90967146 90967433 -112118099 + MER46C DNA MER2_type 23 323 -15 189 182 0 0 chr5 90967587 90967620 -112117912 - L2 LINE L2 -16 3297 3265 362 265 20 82 chr5 90967747 90967894 -112117638 - MIR SINE MIR -122 140 3 3034 202 79 41 chr5 90968163 90969084 -112116448 - L1ME2 LINE L1 -9 6155 5207 2091 138 76 19 chr5 90970110 90970479 -112115053 + MLT1B LTR MaLR 1 390 0 1939 158 0 0 chr5 90970674 90970984 -112114548 + AluSx SINE Alu 1 310 -2 1896 147 11 0 chr5 90971099 90971385 -112114147 - AluJb SINE Alu -23 289 1 424 196 109 43 chr5 90971454 90971592 -112113940 + MIR SINE MIR 89 235 -27 464 326 51 0 chr5 90972890 90973028 -112112504 + L2 LINE L2 3116 3260 -12 411 263 26 64 chr5 90974150 90974306 -112111226 + MIR SINE MIR 57 206 -56 219 69 0 0 chr5 90974353 90974382 -112111150 + (T)n Simple_repeat Simple_repeat 1 29 0 1803 266 115 15 chr5 90974448 90974989 -112110543 - MLT2F LTR ERVL -2 661 67 578 187 20 22 chr5 90975005 90975208 -112110324 - MER45C DNA AcHobo -8 945 711 958 261 67 12 chr5 90975285 90975538 -112109994 - MER45C DNA AcHobo -686 267 1 379 175 0 0 chr5 90975544 90975607 -112109925 - MLT2F LTR ERVL -600 63 1 1898 152 10 26 chr5 90975794 90976103 -112109429 - AluSx SINE Alu -8 304 1 1590 204 133 31 chr5 90976303 90976509 -112109023 + LTR40c LTR ERVL 1 185 -280 2156 164 54 3 chr5 90976509 90976880 -112108652 - MLT1B LTR MaLR 0 390 1 1590 204 133 31 chr5 90976880 90977095 -112108437 + LTR40c LTR ERVL 185 465 0 2145 156 92 45 chr5 90977339 90977807 -112107725 - LTR2B LTR ERV1 0 490 1 2129 188 38 0 chr5 90978850 90979222 -112106310 + MLT1B LTR MaLR 1 386 -4 189 0 0 0 chr5 90979225 90979246 -112106286 + (CCCCCA)n Simple_repeat Simple_repeat 1 21 0 1984 189 98 30 chr5 90980376 90980835 -112104697 + LTR2B LTR ERV1 1 490 0 2636 32 0 16 chr5 90982954 90983263 -112102269 - AluY SINE Alu -7 304 1 1688 160 27 17 chr5 90984666 90984960 -112100572 - MSTA LTR MaLR 0 428 132 2414 75 3 0 chr5 90984968 90985262 -112100270 + AluSp SINE Alu 11 305 -8 411 98 0 0 chr5 90985262 90985323 -112100209 + (GGA)n Simple_repeat Simple_repeat 1 61 0 1129 89 0 0 chr5 90985327 90985473 -112100059 - MSTA LTR MaLR -282 146 1 210 323 111 20 chr5 90985658 90985757 -112099775 + MIR SINE MIR 21 128 -80 225 200 22 0 chr5 90985760 90985805 -112099727 - Charlie6 DNA MER1_type -3273 227 182 194 317 151 16 chr5 90985910 90986096 -112099436 + MIR SINE MIR 47 257 -5 198 0 0 0 chr5 90986999 90987021 -112098511 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr5 90988606 90988644 -112096888 + (CAT)n Simple_repeat Simple_repeat 2 39 0 190 313 54 68 chr5 90988703 90988850 -112096682 - MIR SINE MIR -111 151 7 43561 33 23 1 chr5 90989149 90995172 -112090360 - L1PA2 LINE L1 0 6155 1 548 296 51 14 chr5 90995452 90995844 -112089688 - L1MEc LINE L1 -3669 2460 2081 296 111 0 0 chr5 90995912 90995951 -112089581 - MLT2B1 LTR ERVL -2 518 479 234 91 0 0 chr5 90995951 90995984 -112089548 + (TG)n Simple_repeat Simple_repeat 2 34 0 204 40 0 0 chr5 90996016 90996041 -112089491 + (TG)n Simple_repeat Simple_repeat 2 26 0 330 51 0 0 chr5 90996041 90996080 -112089452 + MLT2D LTR ERVL 319 357 -57 186 43 0 0 chr5 90996080 90996103 -112089429 + (TC)n Simple_repeat Simple_repeat 2 24 0 290 174 0 0 chr5 90996110 90996156 -112089376 + MLT2D LTR ERVL 316 361 -53 312 125 0 25 chr5 90996220 90996283 -112089249 + MLT2C1 LTR ERVL 299 375 -39 1500 161 94 7 chr5 90996293 90996592 -112088940 - MLT2D LTR ERVL -89 325 1 256 275 68 50 chr5 90996960 90997182 -112088350 - L1MEc LINE L1 -4912 1398 1173 3733 96 20 8 chr5 90997189 90997690 -112087842 - L1PA10 LINE L1 -15 6153 5647 1511 80 0 0 chr5 90997690 90997878 -112087654 + L1PA10 LINE L1 5445 5632 -536 * 1645 260 102 65 chr5 90997868 90998908 -112086624 - L1MEc LINE L1 -4963 1156 79 2363 100 0 0 chr5 90999174 90999483 -112086049 + AluSg1 SINE Alu 1 309 0 1777 99 0 0 chr5 91000252 91000473 -112085059 - AluSq SINE Alu -22 291 71 417 244 163 31 chr5 91000703 91000863 -112084669 + MLT1J LTR MaLR 36 216 -295 329 301 115 39 chr5 91001296 91001608 -112083924 - L2 LINE L2 -338 2976 2641 2164 98 3 0 chr5 91002866 91003152 -112082380 + AluSg SINE Alu 23 309 -1 287 258 113 0 chr5 91004446 91004543 -112080989 - L2 LINE L2 -1051 2263 2156 216 158 0 0 chr5 91006275 91006313 -112079219 + (TG)n Simple_repeat Simple_repeat 2 39 0 415 244 99 23 chr5 91007127 91007258 -112078274 + MIR SINE MIR 52 192 -70 360 88 0 0 chr5 91007258 91007315 -112078217 + (GA)n Simple_repeat Simple_repeat 2 58 0 924 250 44 5 chr5 91007315 91007551 -112077981 + MIR SINE MIR 6 241 -21 304 232 179 9 chr5 91008621 91008733 -112076799 + MIR SINE MIR 74 204 -58 2170 90 37 3 chr5 91008813 91009113 -112076419 - AluSg SINE Alu 0 310 1 181 93 23 116 chr5 91009351 91009394 -112076138 - MIR SINE MIR -112 150 112 321 89 0 0 chr5 91009858 91009903 -112075629 + (TG)n Simple_repeat Simple_repeat 2 46 0 184 227 45 0 chr5 91009905 91009949 -112075583 + MIR SINE MIR 121 166 -96 2084 164 18 0 chr5 91010222 91010564 -112074968 - MER7A DNA MER2_type 0 346 1 41180 66 6 2 chr5 91011010 91014330 -112071202 - L1PA6 LINE L1 -1 6153 2794 2808 13 0 0 chr5 91014330 91014636 -112070896 - AluY SINE Alu -5 306 1 41180 66 6 2 chr5 91014636 91017432 -112068100 - L1PA6 LINE L1 -3360 2794 11 340 303 36 59 chr5 91017447 91017668 -112067864 - L1ME4a LINE L1 -283 5838 5623 581 226 153 53 chr5 91017763 91017953 -112067579 + MIR SINE MIR 30 238 -24 24 53 0 0 chr5 91017955 91017993 -112067539 + AT_rich Low_complexity Low_complexity 1 38 0 9281 160 24 5 chr5 91018056 91020333 -112065199 + L1PA16 LINE L1 18 2232 -4617 * 12443 207 36 18 chr5 91020329 91023742 -112061790 + L1PA16 LINE L1 2730 6194 -675 775 181 0 0 chr5 91023742 91023875 -112061657 + FLAM_C SINE Alu 1 133 0 1121 116 12 12 chr5 91023885 91024049 -112061483 + THE1B LTR MaLR 1 164 -200 1844 127 4 0 chr5 91024049 91024309 -112061223 + AluSx SINE Alu 39 299 -13 3746 130 72 23 chr5 91024321 91024977 -112060555 + L1PA16 LINE L1 6179 6866 -3 377 329 28 14 chr5 91025145 91025288 -112060244 - MIR SINE MIR -81 181 37 2263 104 3 7 chr5 91025596 91025903 -112059629 - AluSq SINE Alu -7 306 1 757 36 77 6 chr5 91025909 91026077 -112059455 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 0 0 0 chr5 91026077 91026114 -112059418 + AT_rich Low_complexity Low_complexity 1 37 0 662 75 11 69 chr5 91026114 91026302 -112059230 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 486 92 16 65 chr5 91026301 91026485 -112059047 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 31 58 0 0 chr5 91026485 91026537 -112058995 + AT_rich Low_complexity Low_complexity 1 52 0 243 167 43 0 chr5 91026537 91026675 -112058857 + (TA)n Simple_repeat Simple_repeat 2 145 0 22 0 0 0 chr5 91026842 91026864 -112058668 + AT_rich Low_complexity Low_complexity 1 22 0 397 210 0 0 chr5 91027385 91027466 -112058066 + L1M4 LINE L1 3437 3517 -2629 265 282 0 12 chr5 91028956 91029041 -112056491 + (TA)n Simple_repeat Simple_repeat 2 85 0 330 344 37 55 chr5 91030255 91030473 -112055059 + L2 LINE L2 2488 2701 -613 1796 130 16 31 chr5 91030494 91030817 -112054715 + L1PA16 LINE L1 5848 6165 -1 429 290 83 77 chr5 91031030 91031392 -112054140 + L2 LINE L2 2950 3313 0 231 114 0 0 chr5 91032140 91032175 -112053357 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 461 113 88 5 chr5 91032180 91032587 -112052945 + (TA)n Simple_repeat Simple_repeat 1 440 0 207 185 56 6 chr5 91032590 91032752 -112052780 + (TATAA)n Simple_repeat Simple_repeat 5 174 0 26 64 0 0 chr5 91032755 91032802 -112052730 + AT_rich Low_complexity Low_complexity 1 47 0 222 114 71 36 chr5 91032804 91032944 -112052588 + (TTATA)n Simple_repeat Simple_repeat 5 149 0 249 141 61 0 chr5 91032997 91033096 -112052436 + (TA)n Simple_repeat Simple_repeat 2 106 0 213 175 0 0 chr5 91033440 91033480 -112052052 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr5 91033514 91033546 -112051986 + AT_rich Low_complexity Low_complexity 1 32 0 310 324 60 36 chr5 91033563 91033844 -112051688 - L1MC/D LINE L1 -2223 5585 5298 316 292 43 72 chr5 91034673 91034882 -112050650 - L3 LINE CR1 -245 1332 1130 200 97 32 0 chr5 91034882 91034913 -112050619 + CT-rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 91035504 91035527 -112050005 + AT_rich Low_complexity Low_complexity 1 23 0 309 24 0 0 chr5 91035527 91035568 -112049964 - L1PA2 LINE L1 -6 6149 6109 433 332 9 29 chr5 91035793 91035959 -112049573 - MIR3 SINE MIR -44 164 1 2180 126 3 0 chr5 91036675 91036976 -112048556 + AluSx SINE Alu 2 303 -9 196 254 18 97 chr5 91037107 91037221 -112048311 + MIR SINE MIR 35 139 -69 1626 182 48 34 chr5 91038260 91038466 -112047066 - MLT1B LTR MaLR 0 390 175 221 0 35 0 chr5 91038466 91038495 -112047037 + (GA)n Simple_repeat Simple_repeat 1 30 0 1626 182 48 34 chr5 91038495 91038639 -112046893 - MLT1B LTR MaLR -215 175 35 1884 119 49 3 chr5 91038873 91039159 -112046373 + AluSx SINE Alu 1 299 -13 514 334 190 16 chr5 91039838 91040492 -112045040 - L2 LINE L2 0 3313 2531 544 292 110 34 chr5 91040822 91041641 -112043891 - L1MC/D LINE L1 -1534 4612 3732 1577 179 7 30 chr5 91041729 91042031 -112043501 + AluJo SINE Alu 1 295 -17 477 305 127 32 chr5 91042049 91042491 -112043041 + L1M4 LINE L1 2606 3089 -3057 288 77 0 0 chr5 91042897 91042936 -112042596 + (TTCTCC)n Simple_repeat Simple_repeat 5 43 0 891 137 43 0 chr5 91043930 91044091 -112041441 + HSMAR2 DNA Mariner 2 169 -1133 1145 43 0 0 chr5 91044091 91044231 -112041301 + AluY SINE Alu 172 311 0 6240 134 16 20 chr5 91044239 91044413 -112041119 + HSMAR2 DNA Mariner 165 338 -964 2264 84 16 0 chr5 91044413 91044721 -112040811 + L1PA13 LINE L1 5846 6158 -5 6240 134 16 20 chr5 91044721 91045552 -112039980 + HSMAR2 DNA Mariner 338 1166 -136 563 218 18 0 chr5 91045912 91046022 -112039510 + MIR SINE MIR 40 151 -111 202 327 218 6 chr5 91046323 91046479 -112039053 - MIR SINE MIR -54 208 20 1631 157 43 18 chr5 91047575 91047856 -112037676 - AluJb SINE Alu 0 312 25 1462 150 0 5 chr5 91048465 91048685 -112036847 - AluSg/x SINE Alu -10 300 82 5340 40 6 1 chr5 91048860 91049513 -112036019 - L1PA7 LINE L1 0 6154 5499 514 281 8 0 chr5 91049882 91050010 -112035522 + MER94 DNA DNA 3 131 -3 351 293 130 65 chr5 91050050 91050358 -112035174 - L2 LINE L2 -256 3016 2680 401 319 142 9 chr5 91050670 91051015 -112034517 + L2 LINE L2 1564 1954 -1360 2343 121 86 0 chr5 91052103 91052549 -112032983 + MER1A DNA MER1_type 1 529 0 695 275 24 36 chr5 91053208 91053459 -112032073 + MIR SINE MIR 2 249 -13 335 225 81 45 chr5 91053463 91053579 -112031953 - MIR SINE MIR -64 144 49 1190 245 73 20 chr5 91054160 91054515 -112031017 - MLT1A2 LTR MaLR 0 374 1 1143 288 99 64 chr5 91055069 91056010 -112029522 - L2 LINE L2 -21 3292 2034 190 328 17 0 chr5 91056086 91056144 -112029388 - L2 LINE L2 -1426 1888 1830 228 214 24 48 chr5 91056151 91056235 -112029297 + L1MEd LINE L1 2 83 -6036 185 108 118 10 chr5 91056423 91056525 -112029007 + (TATAA)n Simple_repeat Simple_repeat 5 117 0 353 193 45 34 chr5 91056558 91056734 -112028798 + (TAG)n Simple_repeat Simple_repeat 2 179 0 359 56 42 14 chr5 91056735 91056807 -112028725 + (TA)n Simple_repeat Simple_repeat 1 74 0 2169 105 7 10 chr5 91056813 91057118 -112028414 + AluSq SINE Alu 1 304 -9 361 336 28 14 chr5 91057426 91057569 -112027963 + MIR SINE MIR 37 181 -81 3776 127 72 23 chr5 91057737 91058393 -112027139 - L1PA16 LINE L1 -3 6163 5476 349 114 117 14 chr5 91058407 91058506 -112027026 - AluY SINE Alu -6 295 205 2695 176 73 33 chr5 91258542 91259585 -111825947 - L1MB1 LINE L1 -213 6235 3974 1900 125 20 20 chr5 91261105 91261410 -111824122 - AluSc SINE Alu -4 305 1 2776 163 69 16 chr5 91261410 91261975 -111823557 - MST-int LTR MaLR -22 1629 1035 180 217 43 0 chr5 91262556 91262602 -111822930 + MIR SINE MIR 184 231 -31 377 337 116 51 chr5 91263658 91263767 -111821765 - L1M2 LINE L1 -5749 1100 1000 224 29 0 29 chr5 91263767 91263801 -111821731 + (CCCCCG)n Simple_repeat Simple_repeat 4 36 0 377 337 116 51 chr5 91263801 91264104 -111821428 - L1M2 LINE L1 -5849 1000 661 366 285 74 108 chr5 91263956 91264373 -111821159 + L1M2 LINE L1 834 1236 -5613 * 3509 93 17 0 chr5 91264522 91264995 -111820537 + THE1B-int LTR MaLR 1100 1580 0 2114 151 45 28 chr5 91264995 91265353 -111820179 + THE1B LTR MaLR 1 364 0 23 68 0 0 chr5 91265470 91265514 -111820018 + AT_rich Low_complexity Low_complexity 1 44 0 316 256 120 23 chr5 91267215 91267348 -111818184 + MLT1H LTR MaLR 29 174 -375 245 317 49 0 chr5 91267395 91267477 -111818055 + MLT1H LTR MaLR 238 323 -226 617 42 0 0 chr5 91267719 91267791 -111817741 - L1PA6 LINE L1 -281 5873 5802 294 351 90 0 chr5 91267791 91267902 -111817630 - MIR SINE MIR -134 128 8 863 57 57 0 chr5 91268399 91268523 -111817009 - AluY SINE Alu -180 131 1 1776 128 68 5 chr5 91268523 91268906 -111816626 - L1P LINE L1 -772 5374 4992 1179 269 36 0 chr5 91268902 91269266 -111816266 - L1MB1 LINE L1 -3243 3183 2807 * 451 120 13 13 chr5 91269267 91269342 -111816190 - MADE1 DNA Mariner 0 80 6 22 0 0 0 chr5 91271373 91271395 -111814137 + AT_rich Low_complexity Low_complexity 1 22 0 314 299 26 17 chr5 91271653 91271770 -111813762 + Charlie8 DNA MER1_type 105 222 -2195 851 106 24 52 chr5 91272131 91272285 -111813247 - THE1C LTR MaLR 0 375 233 1176 207 67 39 chr5 91272563 91272920 -111812612 + MLT2D LTR ERVL 1 367 -47 351 0 0 0 chr5 91272980 91273019 -111812513 + (TG)n Simple_repeat Simple_repeat 2 40 0 258 32 0 0 chr5 91273021 91273052 -111812480 + (GA)n Simple_repeat Simple_repeat 2 32 0 468 275 43 7 chr5 91274187 91274325 -111811207 - MIR SINE MIR -87 175 33 234 367 59 6 chr5 91274990 91275159 -111810373 - L2 LINE L2 -683 2631 2454 191 240 13 67 chr5 91275208 91275283 -111810249 + L2 LINE L2 3158 3228 -85 37 52 0 0 chr5 91275489 91275547 -111809985 + AT_rich Low_complexity Low_complexity 1 58 0 202 292 56 0 chr5 91276735 91276807 -111808725 - MIR SINE MIR -123 139 64 276 30 0 0 chr5 91277240 91277273 -111808259 + (T)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr5 91277472 91277500 -111808032 + AT_rich Low_complexity Low_complexity 1 28 0 2524 111 16 30 chr5 91278795 91279164 -111806368 - THE1B LTR MaLR 0 364 1 4783 116 68 0 chr5 91279165 91279944 -111805588 - THE1B-int LTR MaLR -1 1579 748 3718 210 44 52 chr5 91280140 91280403 -111805129 - L1MB1 LINE L1 -3650 2776 2512 2457 167 26 37 chr5 91280403 91280859 -111804673 + LTR47A LTR ERVL 2 452 0 3718 210 44 52 chr5 91280859 91281362 -111804170 - L1MB1 LINE L1 -3914 2512 1980 1631 129 8 8 chr5 91281362 91281644 -111803888 - AluSg SINE Alu 0 323 42 3718 210 44 52 chr5 91281644 91281878 -111803654 - L1MB1 LINE L1 -4446 1980 1746 534 125 57 0 chr5 91281881 91281969 -111803563 - L1MA4A LINE L1 -6 6297 6205 1381 185 109 16 chr5 91282119 91282487 -111803045 - MER69 DNA AcHobo -36 2490 2089 1648 229 17 29 chr5 91282499 91282910 -111802622 - L1ME2 LINE L1 -2 6162 5757 23702 25 2 0 chr5 91282930 91286335 -111799197 - L1PA3 LINE L1 -3 6152 2733 274 281 49 27 chr5 91287755 91287940 -111797592 + L2 LINE L2 1607 1795 -1519 647 240 22 22 chr5 91288224 91288407 -111797125 + MIR SINE MIR 66 248 -14 198 167 0 0 chr5 91288411 91288447 -111797085 + (TTG)n Simple_repeat Simple_repeat 2 37 0 675 293 132 4 chr5 91288638 91288904 -111796628 - L2 LINE L2 0 3313 3014 306 0 0 0 chr5 91288975 91289009 -111796523 + (TC)n Simple_repeat Simple_repeat 2 35 0 237 286 54 0 chr5 91289592 91289648 -111795884 - MIR SINE MIR -176 86 28 256 361 28 9 chr5 91289981 91290089 -111795443 - L2 LINE L2 -26 3246 3137 661 236 32 0 chr5 91291292 91291449 -111794083 + MER103 DNA DNA 4 165 -1 729 251 82 0 chr5 91291951 91292134 -111793398 - MIR SINE MIR -64 198 1 461 310 55 20 chr5 91292586 91292786 -111792746 - MIR SINE MIR -2 260 54 236 260 0 60 chr5 91293231 91293331 -111792201 + GA-rich Low_complexity Low_complexity 3 96 0 207 0 0 0 chr5 91293887 91293910 -111791622 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 21 71 0 0 chr5 91294819 91294861 -111790671 + AT_rich Low_complexity Low_complexity 1 42 0 680 229 181 17 chr5 91296114 91296402 -111789130 - L1ME4a LINE L1 -1 6120 5786 3173 179 3 45 chr5 91296842 91297479 -111788053 + L1MA2 LINE L1 1 610 -6955 * 6725 139 23 10 chr5 91297472 91299011 -111786521 + L1MA2 LINE L1 6144 7702 -21 2202 95 0 0 chr5 91299011 91299284 -111786248 + AluSg SINE Alu 1 273 -37 270 0 0 0 chr5 91299288 91299318 -111786214 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 416 158 0 12 chr5 91299318 91299400 -111786132 + (TA)n Simple_repeat Simple_repeat 1 81 0 225 0 0 0 chr5 91299400 91299425 -111786107 + (CA)n Simple_repeat Simple_repeat 2 26 0 191 224 0 30 chr5 91300197 91300264 -111785268 + (TATG)n Simple_repeat Simple_repeat 1 65 0 688 266 68 5 chr5 91300413 91300620 -111784912 + MIR SINE MIR 4 223 -39 414 303 121 47 chr5 91305004 91305410 -111780122 + L2 LINE L2 2445 2880 -434 209 178 44 22 chr5 91305741 91305786 -111779746 + L2 LINE L2 3255 3300 -13 2187 120 7 0 chr5 91305790 91306090 -111779442 + AluSq SINE Alu 5 306 -7 451 281 185 51 chr5 91306343 91306873 -111778659 - L1ME3 LINE L1 -215 5947 5347 25 31 0 0 chr5 91306876 91306908 -111778624 + AT_rich Low_complexity Low_complexity 1 32 0 1055 214 111 3 chr5 91307455 91307744 -111777788 - MER33 DNA MER1_type 0 324 5 269 118 20 0 chr5 91309081 91309132 -111776400 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 310 276 38 0 chr5 91309453 91309558 -111775974 - MIR SINE MIR -108 154 46 1829 217 41 0 chr5 91310880 91311299 -111774233 + MER63B DNA MER1_type 1 436 0 231 216 59 0 chr5 91311387 91311438 -111774094 + MIR SINE MIR 204 257 -5 867 201 38 0 chr5 91312608 91312817 -111772715 + L1MD1 LINE L1 5100 5316 -830 2772 175 53 24 chr5 91312818 91313435 -111772097 + L1MD1 LINE L1 5608 6242 0 392 294 89 19 chr5 91315545 91315814 -111769718 + L1ME4a LINE L1 1601 1888 -4652 1247 62 0 0 chr5 91316227 91316387 -111769145 + L1PA5 LINE L1 5995 6154 0 226 308 56 25 chr5 91316527 91316725 -111768807 + L1ME4a LINE L1 2541 2744 -3796 385 285 107 65 chr5 91316927 91317264 -111768268 + L1ME4a LINE L1 5377 5727 -813 274 215 185 22 chr5 91317327 91317462 -111768070 + L1ME4a LINE L1 6017 6173 -383 218 250 0 0 chr5 91318540 91318588 -111766944 - MIR SINE MIR -31 231 184 230 361 0 0 chr5 91319408 91319505 -111766027 + HsTC2 DNA Tc2 508 604 -1294 985 239 42 16 chr5 91319779 91320085 -111765447 + L1MB7 LINE L1 4826 5139 -1007 * 3038 164 12 10 chr5 91320084 91320665 -111764867 - L1MA9 LINE L1 -204 6108 5527 865 205 15 15 chr5 91320664 91320895 -111764637 + L1MA9 LINE L1 6061 6296 -4 * 3553 189 51 30 chr5 91320906 91321941 -111763591 + L1MB7 LINE L1 5126 6181 -3 717 329 40 47 chr5 91321958 91322359 -111763173 + L3 LINE CR1 281 678 -899 454 316 59 5 chr5 91323624 91323811 -111761721 - MIR SINE MIR -45 217 21 262 371 53 6 chr5 91324477 91324647 -111760885 - L2 LINE L2 -683 2631 2454 188 237 13 79 chr5 91324697 91324773 -111760759 + L2 LINE L2 3158 3228 -85 303 271 86 36 chr5 91324853 91324993 -111760539 + L1ME4a LINE L1 6347 6493 -22 34 42 0 0 chr5 91324996 91325044 -111760488 + AT_rich Low_complexity Low_complexity 1 48 0 1871 71 0 0 chr5 91326442 91326680 -111758852 + L1PA7 LINE L1 5912 6149 -5 27 0 0 0 chr5 91327052 91327079 -111758453 + AT_rich Low_complexity Low_complexity 1 27 0 593 321 87 7 chr5 91327312 91327611 -111757921 + MLT1H LTR MaLR 1 323 -226 537 42 14 0 chr5 91327856 91327927 -111757605 - L1PA7 LINE L1 -281 5873 5802 252 333 56 0 chr5 91327927 91328017 -111757515 - MIR SINE MIR -134 128 34 13453 28 15 0 chr5 91328486 91330271 -111755261 - L1P LINE L1 -2193 3953 2142 1264 262 97 41 chr5 91330352 91330794 -111754738 - MLT1G1 LTR MaLR -44 551 85 1415 209 112 35 chr5 91330946 91331348 -111754184 + MLT2B1 LTR ERVL 1 433 -87 2631 185 83 43 chr5 91331358 91332029 -111753503 + LTR8A LTR ERV1 30 727 0 204 250 0 0 chr5 91332085 91332125 -111753407 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 525 236 47 0 chr5 91332444 91332571 -111752961 - MER69 DNA AcHobo -1052 174 42 2034 163 21 3 chr5 91332734 91333072 -111752460 + MER2 DNA MER2_type 1 344 0 302 259 195 36 chr5 91333540 91333791 -111751741 - LTR33 LTR ERVL -160 361 71 1764 194 77 55 chr5 91333893 91334387 -111751145 - MLT1D LTR MaLR 0 505 1 778 241 49 79 chr5 91335437 91335702 -111749830 + MIR SINE MIR 6 262 0 273 203 54 27 chr5 91336404 91336478 -111749054 - MLT1K LTR MaLR -330 258 183 201 152 0 0 chr5 91336644 91336677 -111748855 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr5 91336782 91336805 -111748727 + AT_rich Low_complexity Low_complexity 1 23 0 361 105 70 0 chr5 91336980 91337037 -111748495 - AluJ/FRAM SINE Alu -10 292 232 1313 223 33 35 chr5 91337934 91338302 -111747230 + MLT2D LTR ERVL 1 367 -47 351 0 0 0 chr5 91338365 91338404 -111747128 + (TG)n Simple_repeat Simple_repeat 2 40 0 258 32 0 0 chr5 91338406 91338437 -111747095 + (GA)n Simple_repeat Simple_repeat 2 32 0 367 339 68 10 chr5 91339320 91339512 -111746020 + MIR SINE MIR 5 207 -55 1995 232 84 2 chr5 91339520 91340033 -111745499 - MER119 DNA MER1_type 0 583 29 2476 103 0 0 chr5 91340138 91340449 -111745083 + AluSx SINE Alu 1 311 -1 224 305 0 0 chr5 91340791 91340850 -111744682 + MIR SINE MIR 49 107 -155 430 304 81 7 chr5 91340869 91341017 -111744515 + MIR SINE MIR 83 241 -21 26 30 0 0 chr5 91341047 91341080 -111744452 + AT_rich Low_complexity Low_complexity 1 33 0 344 313 78 21 chr5 91341892 91342084 -111743448 - MIR SINE MIR -7 255 53 368 227 13 0 chr5 91342182 91342257 -111743275 - MER63A DNA MER1_type -31 179 104 1130 195 77 137 chr5 91342263 91342678 -111742854 - MLT1A2 LTR MaLR 0 374 1 695 253 24 106 chr5 91342761 91343054 -111742478 - Charlie2 DNA MER1_type -2511 271 3 246 286 57 0 chr5 91343077 91343147 -111742385 - L2 LINE L2 -78 3194 3121 1295 305 58 2 chr5 91343187 91343729 -111741803 + MER115 DNA AcHobo 89 689 -4 585 310 53 22 chr5 91344032 91344387 -111741145 - L2 LINE L2 -1040 2274 1909 228 202 273 0 chr5 91345655 91345754 -111739778 + LTR33A LTR ERVL 59 184 -339 261 143 114 0 chr5 91345857 91345927 -111739605 + LTR33A LTR ERVL 341 418 -105 1220 191 135 53 chr5 91345929 91346403 -111739129 + LTR54 LTR ERV1 3 403 0 339 153 165 12 chr5 91347921 91348055 -111737477 + FLAM_A SINE Alu 34 180 0 303 317 48 0 chr5 91348575 91348679 -111736853 - MIR SINE MIR 0 262 154 317 309 43 0 chr5 91350156 91350250 -111735282 + MIR SINE MIR 71 168 -94 250 254 113 45 chr5 91350555 91350680 -111734852 + MIR SINE MIR 26 156 -63 2640 88 36 6 chr5 91351836 91352200 -111733332 - THE1C LTR MaLR 0 375 1 354 315 103 12 chr5 91352482 91352647 -111732885 - MIR SINE MIR -19 243 64 276 30 0 0 chr5 91353092 91353125 -111732407 + (T)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr5 91353327 91353355 -111732177 + AT_rich Low_complexity Low_complexity 1 28 0 2450 113 8 30 chr5 91354668 91355040 -111730492 - THE1B LTR MaLR 0 364 1 8968 92 115 3 chr5 91355041 91356400 -111729132 - THE1B-int LTR MaLR -1 1579 69 300 200 53 0 chr5 91356406 91356481 -111729051 - THE1B LTR MaLR -92 272 194 228 35 0 0 chr5 91356481 91356510 -111729022 + (GA)n Simple_repeat Simple_repeat 2 30 0 1061 144 41 0 chr5 91356511 91356706 -111728826 - THE1B LTR MaLR -161 203 1 5647 109 15 9 chr5 91356944 91357345 -111728187 + L1PA13 LINE L1 4992 5389 -774 2533 65 0 0 chr5 91357345 91357653 -111727879 + AluY SINE Alu 1 308 -3 5647 109 15 9 chr5 91357653 91358398 -111727134 + L1PA13 LINE L1 5389 6143 -20 218 58 19 58 chr5 91358414 91358466 -111727066 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 881 272 25 0 chr5 91358469 91358752 -111726780 + L1M4 LINE L1 3512 3801 -2345 747 152 28 156 chr5 91358753 91358804 -111726728 - MLT1A1 LTR MaLR 0 365 309 6912 59 6 2 chr5 91358804 91360198 -111725334 + L1PA6 LINE L1 4753 6152 -2 747 152 28 156 chr5 91360198 91360429 -111725103 - MLT1A1 LTR MaLR -56 309 119 3037 203 50 28 chr5 91360434 91361173 -111724359 - MLT1A1-int LTR MaLR -980 755 1 845 233 98 73 chr5 91361173 91361529 -111724003 - MLT1A1 LTR MaLR 0 365 1 4917 235 25 14 chr5 91361530 91363006 -111722526 + L1M4 LINE L1 3799 5291 -855 382 264 11 0 chr5 91363027 91363114 -111722418 + FLAM_A SINE Alu 11 98 -35 2376 103 0 0 chr5 91365424 91365726 -111719806 - AluSg SINE Alu -7 303 2 360 283 19 0 chr5 91366198 91366304 -111719228 + MER94 DNA DNA 26 133 -1 2180 112 48 28 chr5 91367439 91367796 -111717736 + THE1B LTR MaLR 1 364 0 11825 96 1 2 chr5 91367796 91369377 -111716155 + THE1B-int LTR MaLR 1 1580 0 2086 152 33 28 chr5 91369377 91369739 -111715793 + THE1B LTR MaLR 1 364 0 23 68 0 0 chr5 91369857 91369901 -111715631 + AT_rich Low_complexity Low_complexity 1 44 0 226 355 65 24 chr5 91370266 91370390 -111715142 - L2 LINE L2 -57 3215 3087 378 311 67 7 chr5 91370602 91370737 -111714795 + MIR3 SINE MIR 3 145 -63 1762 134 3 35 chr5 91370745 91370890 -111714642 + AluJb SINE Alu 1 149 -155 2125 136 36 31 chr5 91370890 91371250 -111714282 + THE1B LTR MaLR 3 364 0 1762 134 3 35 chr5 91371250 91371417 -111714115 + AluJb SINE Alu 149 304 0 331 319 49 27 chr5 91371656 91371841 -111713691 + MER5A DNA MER1_type 1 189 0 2852 7 0 0 chr5 91372145 91372454 -111713078 - AluYa5 SINE Alu -2 309 1 2013 154 0 6 chr5 91372535 91372846 -111712686 - AluJb SINE Alu -2 310 2 1685 244 27 24 chr5 91373138 91373720 -111711812 + L1M2 LINE L1 1543 2093 -4244 1447 235 83 22 chr5 91373728 91373768 -111711764 + L1MC3 LINE L1 5086 5122 -1044 2009 110 12 55 chr5 91373768 91374095 -111711437 + AluSq SINE Alu 1 313 0 1447 235 83 22 chr5 91374095 91374194 -111711338 + L1MC3 LINE L1 5122 5214 -952 4481 56 3 24 chr5 91374194 91374573 -111710959 - L1PA5 LINE L1 0 6154 5790 2378 68 10 0 chr5 91374573 91374868 -111710664 - AluY SINE Alu -13 298 1 4481 56 3 24 chr5 91374868 91375079 -111710453 - L1PA5 LINE L1 -364 5790 5576 1447 235 83 22 chr5 91375079 91375921 -111709611 + L1MC3 LINE L1 5214 6161 -5 1597 209 136 4 chr5 91375938 91376432 -111709100 + L1MC4 LINE L1 6823 7381 -661 257 342 76 30 chr5 91376442 91376679 -111708853 - L2 LINE L2 -190 3082 2835 391 282 120 41 chr5 91376772 91377063 -111708469 - L2 LINE L2 -993 2321 2008 217 324 56 28 chr5 91377175 91377283 -111708249 + MIR3 SINE MIR 93 203 -5 274 336 37 37 chr5 91377743 91377877 -111707655 - L2 LINE L2 -5 3267 3134 439 252 107 0 chr5 91378307 91378438 -111707094 - MIR SINE MIR -21 241 97 2297 103 7 0 chr5 91379835 91380136 -111705396 + AluSg SINE Alu 3 305 -5 225 0 0 0 chr5 91380399 91380424 -111705108 + (A)n Simple_repeat Simple_repeat 1 25 0 420 263 72 33 chr5 91381907 91382059 -111703473 - MIR3 SINE MIR -48 160 3 1553 203 122 24 chr5 91384185 91384224 -111701308 - MLT2B1 LTR ERVL 0 554 520 183 80 0 0 chr5 91384224 91384249 -111701283 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1553 203 122 24 chr5 91384249 91384657 -111700875 - MLT2B1 LTR ERVL -34 520 1 2392 91 0 0 chr5 91385742 91386038 -111699494 - AluSx SINE Alu -14 298 3 334 158 267 10 chr5 91386246 91386347 -111699185 - L1MC4 LINE L1 -2 8040 7914 381 309 96 6 chr5 91387722 91387909 -111697623 - MIR SINE MIR -3 259 57 504 276 47 47 chr5 91387912 91388126 -111697406 + MIR SINE MIR 12 225 -37 3933 81 222 6 chr5 91390176 91390807 -111694725 - THE1B-int LTR MaLR -745 835 69 1376 153 37 53 chr5 91390816 91391127 -111694405 - THE1B LTR MaLR -130 298 1 282 301 48 27 chr5 91391328 91391474 -111694058 + MLT1J2 LTR MaLR 280 428 -22 25 0 0 0 chr5 91392519 91392544 -111692988 + AT_rich Low_complexity Low_complexity 1 25 0 2372 73 0 13 chr5 91394074 91394388 -111691144 + AluY SINE Alu 1 310 -1 584 318 40 0 chr5 91395372 91395570 -111689962 - MIR SINE MIR -10 252 47 203 261 134 42 chr5 91397652 91397794 -111687738 + L2 LINE L2 3158 3312 -1 24 67 0 0 chr5 91399832 91399877 -111685655 + AT_rich Low_complexity Low_complexity 1 45 0 228 67 0 0 chr5 91400745 91400775 -111684757 + (T)n Simple_repeat Simple_repeat 1 30 0 2371 174 24 5 chr5 91401184 91401603 -111683929 + MSTA LTR MaLR 1 427 -1 9103 162 21 16 chr5 91401604 91403213 -111682319 + MSTA-int LTR MaLR 1 1620 -31 2143 126 7 7 chr5 91403213 91403515 -111682017 + AluY SINE Alu 1 302 -9 9103 162 21 16 chr5 91403515 91403548 -111681984 + MSTA-int LTR MaLR 1620 1651 0 2202 129 22 6 chr5 91403550 91403906 -111681626 + MSTA LTR MaLR 67 428 0 22 0 0 0 chr5 91404207 91404229 -111681303 + AT_rich Low_complexity Low_complexity 1 22 0 516 301 70 35 chr5 91404294 91404606 -111680926 + L2 LINE L2 2991 3313 0 219 313 42 10 chr5 91404718 91404814 -111680718 - L3 LINE CR1 -1080 497 399 966 277 170 38 chr5 91405005 91405558 -111679974 - L2 LINE L2 -1199 2115 1490 188 309 227 10 chr5 91405531 91405628 -111679904 + L3 LINE CR1 646 763 -814 * 403 262 157 100 chr5 91405947 91406356 -111679176 + L3 LINE CR1 1135 1566 -11 291 335 146 11 chr5 91406382 91406567 -111678965 - MIR SINE MIR -44 218 9 310 157 14 14 chr5 91406689 91406759 -111678773 + (TA)n Simple_repeat Simple_repeat 2 71 0 192 44 0 67 chr5 91407636 91407681 -111677851 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 339 65 0 0 chr5 91408062 91408108 -111677424 + (TG)n Simple_repeat Simple_repeat 2 47 0 528 291 93 20 chr5 91408333 91408580 -111676952 + MLT1K LTR MaLR 307 571 -17 186 291 73 0 chr5 91411638 91411693 -111673839 - MIR3 SINE MIR -17 191 133 4593 161 42 8 chr5 91411701 91412641 -111672891 - L1MB1 LINE L1 -1 6403 5431 * 7169 199 41 32 chr5 91412635 91413016 -111672516 - L1MB1 LINE L1 -2130 4252 3876 2102 121 31 0 chr5 91413016 91413306 -111672226 - AluSx SINE Alu -13 299 1 7169 199 41 32 chr5 91413306 91414960 -111670572 - L1MB1 LINE L1 -2506 3876 2193 983 167 0 33 chr5 91414960 91415140 -111670392 - FRAM SINE Alu 0 40 1 258 200 0 0 chr5 91415150 91415195 -111670337 - Alu SINE Alu -257 45 1 2451 240 69 65 chr5 91415201 91416744 -111668788 - L1MB1 LINE L1 -4174 2208 822 657 344 60 29 chr5 91416744 91417058 -111668474 - L1MB1 LINE L1 -5411 892 569 237 114 0 89 chr5 91417098 91417177 -111668355 + (TAAAAA)n Simple_repeat Simple_repeat 1 72 0 225 0 0 0 chr5 91417416 91417441 -111668091 + (CA)n Simple_repeat Simple_repeat 2 26 0 359 336 162 13 chr5 91417918 91418233 -111667299 - L3 LINE CR1 -131 1446 1085 479 330 85 52 chr5 91419536 91420227 -111665305 + L2 LINE L2 1776 2585 -729 699 148 25 8 chr5 91420240 91420362 -111665170 - MLT1D LTR MaLR 0 505 382 640 139 53 18 chr5 91420434 91420556 -111664976 - MLT1D LTR MaLR 0 583 399 16869 224 23 31 chr5 91420556 91427438 -111658094 + L1PA12 LINE L1 19 6509 -1075 1515 229 85 19 chr5 91427519 91428034 -111657498 - MER69 DNA AcHobo -455 2071 1523 2176 128 10 0 chr5 91428348 91428654 -111656878 + AluSx SINE Alu 1 309 -3 207 176 0 0 chr5 91429125 91429159 -111656373 + GA-rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 91429191 91429214 -111656318 + AT_rich Low_complexity Low_complexity 1 23 0 190 273 0 0 chr5 91429435 91429479 -111656053 + L2 LINE L2 3229 3272 0 246 376 83 0 chr5 91429588 91429697 -111655835 - L3 LINE CR1 -222 1355 1238 21 71 0 0 chr5 91432051 91432093 -111653439 + AT_rich Low_complexity Low_complexity 1 42 0 374 243 66 52 chr5 91432809 91432893 -111652639 - MIR SINE MIR -1 261 173 2168 108 58 22 chr5 91432893 91433255 -111652277 + THE1C LTR MaLR 1 375 0 374 243 66 52 chr5 91433255 91433306 -111652226 - MIR SINE MIR -89 173 124 22 0 0 0 chr5 91434001 91434023 -111651509 + AT_rich Low_complexity Low_complexity 1 22 0 720 250 31 10 chr5 91434520 91434716 -111650816 - MLT1A2 LTR MaLR -2 372 173 227 79 26 0 chr5 91434716 91434754 -111650778 + (GA)n Simple_repeat Simple_repeat 2 40 0 794 172 72 33 chr5 91434754 91434934 -111650598 - MLT1A2 LTR MaLR -187 187 1 683 238 32 21 chr5 91434964 91435153 -111650379 + MIR SINE MIR 72 262 0 755 60 60 0 chr5 91436324 91436424 -111649108 + AluSg/x SINE Alu 182 287 -25 536 250 39 10 chr5 91436511 91436715 -111648817 + L1MC4 LINE L1 7690 7899 -143 276 247 0 25 chr5 91436741 91436822 -111648710 + L1MC4 LINE L1 6614 6692 -1350 225 154 0 0 chr5 91436939 91436978 -111648554 + (TG)n Simple_repeat Simple_repeat 2 40 0 20520 125 9 11 chr5 91436994 91437477 -111648055 - L1PA10 LINE L1 -12 6471 5989 1951 117 4 0 chr5 91437477 91437743 -111647789 - AluSp SINE Alu -8 305 39 20520 125 9 11 chr5 91437743 91441348 -111644184 - L1PA10 LINE L1 -494 5989 2394 3329 93 47 8 chr5 91441348 91441840 -111643692 + MER9 LTR ERVK 1 511 0 20520 125 9 11 chr5 91441840 91441873 -111643659 - L1PA10 LINE L1 -4089 2394 2362 5510 216 38 65 chr5 91441868 91443534 -111641998 - L1PA10 LINE L1 -4840 1621 1 * 2393 129 42 42 chr5 91443543 91443977 -111641555 + Tigger2a DNA MER2_type 1 434 0 273 227 42 59 chr5 91444013 91444132 -111641400 + L1MC4 LINE L1 7926 8042 0 259 290 89 116 chr5 91444571 91444830 -111640702 - MIR SINE MIR -6 256 5 393 189 42 0 chr5 91447747 91447842 -111637690 - L1MD3 LINE L1 -10 7985 7887 * 776 186 100 25 chr5 91447832 91448094 -111637438 - L1ME LINE L1 -693 5473 5191 * 1969 266 137 21 chr5 91448080 91448462 -111637070 - L1MCc LINE L1 -4531 2033 1697 216 0 0 0 chr5 91448462 91448486 -111637046 + (TG)n Simple_repeat Simple_repeat 2 25 0 1969 266 137 21 chr5 91448486 91449526 -111636006 - L1MCc LINE L1 -4867 1697 428 307 336 63 66 chr5 91449803 91450121 -111635411 - L1MCc LINE L1 -5688 357 41 506 151 0 3 chr5 91450153 91450293 -111635239 - MER53 DNA DNA -3 186 1 1099 75 6 6 chr5 91450342 91450502 -111635030 + (TTC)n Simple_repeat Simple_repeat 3 162 0 195 167 0 0 chr5 91450504 91450546 -111634986 + CT-rich Low_complexity Low_complexity 1 42 0 461 237 59 0 chr5 91451541 91451659 -111633873 + MER58B DNA MER1_type 216 340 -1 243 140 0 0 chr5 91452225 91452275 -111633257 + (CA)n Simple_repeat Simple_repeat 2 51 0 273 269 146 70 chr5 91452922 91453093 -111632439 - LTR16C LTR ERVL 0 491 308 961 218 51 13 chr5 91453429 91453663 -111631869 - MLT1E LTR MaLR -6 587 345 310 331 32 8 chr5 91453899 91454023 -111631509 + L2 LINE L2 2937 3063 -209 461 275 100 113 chr5 91455473 91455935 -111629597 + LTR33 LTR ERVL 29 484 -37 574 274 69 29 chr5 91456468 91456643 -111628889 - MIR3 SINE MIR -13 195 14 478 300 70 53 chr5 91457272 91457499 -111628033 + MIR SINE MIR 32 262 0 431 269 134 25 chr5 91458694 91458932 -111626600 - MLT1J LTR MaLR -4 507 244 1902 213 77 15 chr5 91459161 91459626 -111625906 + MER9 LTR ERVK 18 511 0 1091 172 65 112 chr5 91459971 91460354 -111625178 - MLT1A1 LTR MaLR 0 365 1 348 167 15 24 chr5 91461274 91461361 -111624171 + L1MC/D LINE L1 5366 5445 -723 * 6392 163 49 44 chr5 91461343 91463003 -111622529 + L1MCa LINE L1 7 1664 -4762 * 13929 189 28 16 chr5 91463002 91465435 -111620097 + L1MA4A LINE L1 1 2405 -4443 213 65 0 0 chr5 91465435 91465466 -111620066 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 13929 189 28 16 chr5 91465466 91468252 -111617280 + L1MA4A LINE L1 2405 5278 -1570 996 25 0 0 chr5 91468252 91468372 -111617160 + HERVL-A1 LTR ERVL 1203 1322 -4332 1761 40 0 0 chr5 91468384 91468612 -111616920 + HERVL-A1 LTR ERVL 5427 5654 0 898 151 0 0 chr5 91468612 91468758 -111616774 + MLT2A1 LTR ERVL 1 146 -298 1321 135 10 0 chr5 91468771 91468979 -111616553 + LTR3 LTR ERVK 22 231 -201 3819 152 5 5 chr5 91468981 91469761 -111615771 + L1MA4A LINE L1 6140 6980 -25 2773 152 22 20 chr5 91469763 91469885 -111615647 + L1MA4A LINE L1 5463 5583 -720 2135 112 0 11 chr5 91469885 91470213 -111615319 + AluSg SINE Alu 1 325 0 2773 152 22 20 chr5 91470213 91470627 -111614905 + L1MA4A LINE L1 5583 6001 -302 593 321 87 7 chr5 91470764 91471063 -111614469 + MLT1H LTR MaLR 1 323 -226 577 42 0 0 chr5 91471310 91471382 -111614150 - L1PA7 LINE L1 -281 5873 5802 333 348 80 0 chr5 91471382 91471494 -111614038 - MIR SINE MIR -134 128 8 667 233 78 0 chr5 91472424 91472643 -111612889 - Charlie4 DNA MER1_type 0 1961 1726 685 231 51 47 chr5 91472922 91473099 -111612433 - Charlie4 DNA MER1_type -1696 265 85 2853 10 3 0 chr5 91473099 91473413 -111612119 + AluYb8 SINE Alu 1 315 -3 685 231 51 47 chr5 91473413 91473490 -111612042 - Charlie4 DNA MER1_type -1876 85 10 313 283 51 29 chr5 91473495 91473633 -111611899 + MIR SINE MIR 63 203 -59 1235 196 21 39 chr5 91473936 91474272 -111611260 - L1ME3 LINE L1 -31 6131 5802 1122 290 50 35 chr5 91475871 91476351 -111609181 - MER115 DNA AcHobo -2 691 205 341 321 89 36 chr5 91477145 91477313 -111608219 + L1MC4 LINE L1 7579 7755 -287 278 320 0 0 chr5 91477369 91477466 -111608066 + (TA)n Simple_repeat Simple_repeat 1 97 0 2577 46 0 0 chr5 91478289 91478594 -111606938 - AluY SINE Alu -4 307 3 203 174 152 0 chr5 91479127 91479173 -111606359 + MER5B DNA MER1_type 25 77 -101 417 321 79 39 chr5 91480675 91480885 -111604647 - MIR SINE MIR -10 252 31 378 100 0 0 chr5 91481823 91481883 -111603649 + (CA)n Simple_repeat Simple_repeat 1 60 0 288 259 230 15 chr5 91483207 91483342 -111602190 + MER5B DNA MER1_type 1 164 -14 261 83 0 0 chr5 91484127 91484163 -111601369 + (A)n Simple_repeat Simple_repeat 1 36 0 1437 270 42 37 chr5 91485010 91485230 -111600302 - L2 LINE L2 -701 2613 2395 2153 131 0 16 chr5 91485230 91485544 -111599988 - AluSg SINE Alu -1 309 1 1437 270 42 37 chr5 91485544 91485779 -111599753 - L2 LINE L2 -919 2395 2156 431 321 72 68 chr5 91485783 91486285 -111599247 - ERVL LTR ERVL -1980 3784 3281 1636 319 36 12 chr5 91486332 91486938 -111598594 - ERVL LTR ERVL -1900 3096 2476 301 284 122 14 chr5 91486973 91487121 -111598411 - ERVL LTR ERVL -3235 2419 2256 969 185 10 0 chr5 91487124 91487319 -111598213 + MLT2B1 LTR ERVL 3 199 -321 1255 330 80 9 chr5 91487405 91487745 -111597787 - ERVL LTR ERVL -3422 1574 1259 224 20 39 59 chr5 91487745 91487796 -111597736 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1255 330 80 9 chr5 91487796 91488095 -111597437 - ERVL LTR ERVL -3737 1259 890 332 264 48 16 chr5 91488666 91488791 -111596741 - ERVL LTR ERVL -4761 235 107 899 319 46 22 chr5 91488879 91488968 -111596564 - LTR16A LTR ERVL -6 444 359 369 0 0 0 chr5 91488968 91489009 -111596523 + (CA)n Simple_repeat Simple_repeat 2 42 0 899 319 46 22 chr5 91489009 91489329 -111596203 - LTR16A LTR ERVL -91 359 25 2135 131 3 6 chr5 91490158 91490471 -111595061 - AluSx SINE Alu 0 312 1 608 270 183 34 chr5 91490477 91490768 -111594764 + L2 LINE L2 1989 2334 -980 1015 165 5 0 chr5 91490768 91490962 -111594570 + L1MA5 LINE L1 6104 6298 -2 608 270 183 34 chr5 91490962 91490992 -111594540 + L2 LINE L2 2334 2358 -956 673 168 8 24 chr5 91491015 91491140 -111594392 + FLAM_C SINE Alu 6 128 -15 449 251 15 96 chr5 91491166 91491365 -111594167 + L2 LINE L2 2351 2533 -781 2978 9 0 0 chr5 91491444 91491780 -111593752 + L1PA2 LINE L1 5816 6151 -4 742 305 91 51 chr5 91492179 91492809 -111592723 + L1M4 LINE L1 2254 2908 -3238 30 0 0 0 chr5 91492971 91493001 -111592531 + AT_rich Low_complexity Low_complexity 1 30 0 319 325 42 30 chr5 91493252 91493418 -111592114 - MER5B DNA MER1_type 0 178 11 306 238 286 14 chr5 91493643 91493790 -111591742 - MER5A DNA MER1_type -1 188 2 475 294 82 11 chr5 91494403 91494641 -111590891 - MIR SINE MIR -2 260 8 322 74 37 0 chr5 91495774 91495828 -111589704 + (TC)n Simple_repeat Simple_repeat 1 56 0 926 208 22 0 chr5 91495828 91496006 -111589526 - AluJb SINE Alu 0 312 131 1181 131 0 11 chr5 91496023 91496198 -111589334 + AluSq SINE Alu 66 238 -75 6292 140 68 38 chr5 91496220 91497555 -111587977 + pTR5 LTR ERV1 655 2029 -409 334 191 32 21 chr5 91497555 91497649 -111587883 + LTR30 LTR ERV1 548 642 -80 1274 93 57 0 chr5 91497650 91497844 -111587688 + LTR12 LTR ERV1 377 581 -133 451 149 0 0 chr5 91497846 91497999 -111587533 + AluSq SINE Alu 234 386 0 750 186 0 0 chr5 91498005 91498123 -111587409 - FLAM_C SINE Alu -15 118 1 950 221 5 0 chr5 91499171 91499379 -111586153 + MER2 DNA MER2_type 1 209 -136 25 51 0 0 chr5 91499384 91499423 -111586109 + AT_rich Low_complexity Low_complexity 1 39 0 2688 143 7 12 chr5 91499592 91500020 -111585512 + MSTA LTR MaLR 1 426 -2 403 284 140 18 chr5 91501088 91501317 -111584215 - MIR SINE MIR -5 257 1 367 288 114 26 chr5 91501713 91501945 -111583587 + L1M4 LINE L1 4256 4511 -1635 21 0 0 0 chr5 91502044 91502065 -111583467 + AT_rich Low_complexity Low_complexity 1 21 0 300 315 163 44 chr5 91502078 91502348 -111583184 - L2 LINE L2 -204 3109 2808 335 276 49 16 chr5 91502801 91502924 -111582608 + MLT1J LTR MaLR 290 416 -95 234 154 39 0 chr5 91503307 91503359 -111582173 + (TA)n Simple_repeat Simple_repeat 2 55 0 248 238 0 0 chr5 91504129 91504192 -111581340 - L1MC/D LINE L1 -1987 5821 5759 297 0 0 0 chr5 91504472 91504505 -111581027 + (TG)n Simple_repeat Simple_repeat 2 34 0 265 109 0 36 chr5 91504591 91504646 -111580886 - MLT2F LTR ERVL -2 661 609 1452 225 195 24 chr5 91504710 91505212 -111580320 - MLT2F LTR ERVL -64 599 12 2292 119 0 0 chr5 91505343 91505655 -111579877 + AluSx SINE Alu 1 312 0 2302 97 10 0 chr5 91505655 91505955 -111579577 + AluY SINE Alu 1 303 -8 2260 113 20 0 chr5 91506902 91507203 -111578329 + AluSx SINE Alu 1 307 -5 257 366 45 9 chr5 91507346 91507458 -111578074 + MER5A DNA MER1_type 19 134 -55 * 304 328 56 16 chr5 91507362 91507487 -111578045 - MER5A DNA MER1_type -25 164 35 2475 47 40 0 chr5 91507795 91508094 -111577438 + AluY SINE Alu 1 311 0 2022 146 78 18 chr5 91509796 91510193 -111575339 + Tigger2 DNA MER2_type 2297 2717 -1 530 15 0 15 chr5 91510729 91510797 -111574735 + (CA)n Simple_repeat Simple_repeat 1 67 0 896 336 96 11 chr5 91511623 91512063 -111573469 + L3 LINE CR1 633 1109 -468 184 328 191 16 chr5 91512139 91512322 -111573210 - L3 LINE CR1 -42 1535 1321 2165 154 3 24 chr5 91512459 91512828 -111572704 - THE1B LTR MaLR 0 364 4 21 89 0 0 chr5 91512938 91512994 -111572538 + AT_rich Low_complexity Low_complexity 1 56 0 38 22 0 0 chr5 91513224 91513269 -111572263 + AT_rich Low_complexity Low_complexity 1 45 0 934 187 16 19 chr5 91513348 91513595 -111571937 - MER39 LTR ERV1 -30 638 383 1100 135 62 10 chr5 91513612 91513820 -111571712 - MER39B LTR ERV1 -434 219 1 2207 125 0 0 chr5 91515789 91516086 -111569446 - AluSx SINE Alu -15 297 1 22 35 0 0 chr5 91516151 91516180 -111569352 + AT_rich Low_complexity Low_complexity 1 29 0 2153 151 15 75 chr5 91517254 91517732 -111567800 - MER39 LTR ERV1 0 707 259 299 170 372 0 chr5 91517706 91517800 -111567732 - MER39 LTR ERV1 -572 135 7 * 25 31 0 0 chr5 91518396 91518428 -111567104 + AT_rich Low_complexity Low_complexity 1 32 0 453 288 43 29 chr5 91518525 91518664 -111566868 - MIR SINE MIR -102 160 20 848 326 43 15 chr5 91520047 91520443 -111565089 + ERVL LTR ERVL 1590 1996 -3000 506 383 67 2 chr5 91520440 91520920 -111564612 + ERVL LTR ERVL 4333 4843 -921 * 365 297 9 9 chr5 91520947 91521058 -111564474 - MLT1H LTR MaLR -326 223 113 772 257 19 24 chr5 91521102 91521312 -111564220 - HERV16 LTR ERVL -3000 1996 1788 866 150 0 0 chr5 91522170 91522303 -111563229 - FLAM_C SINE Alu 0 133 1 332 330 57 5 chr5 91522769 91522963 -111562569 + L1MC4 LINE L1 5351 5554 -2254 779 135 0 0 chr5 91523321 91523432 -111562100 + AluSc SINE Alu 169 279 -30 285 283 106 9 chr5 91523449 91523562 -111561970 + Charlie8 DNA MER1_type 95 218 -2199 309 281 11 11 chr5 91523857 91523946 -111561586 + L1MC4 LINE L1 6615 6703 -1339 222 118 0 0 chr5 91523946 91523980 -111561552 + (TG)n Simple_repeat Simple_repeat 2 35 0 1380 155 23 4 chr5 91523980 91524238 -111561294 + L1M3f LINE L1 77 339 -4989 * 2544 173 7 0 chr5 91524237 91524807 -111560725 + L1M3f LINE L1 267 872 -4456 1665 160 160 16 chr5 91524816 91525190 -111560342 + MSTA LTR MaLR 1 428 0 832 189 50 35 chr5 91525340 91525541 -111559991 - MER20 DNA MER1_type 0 219 16 341 293 15 38 chr5 91526840 91526973 -111558559 + MIR SINE MIR 1 130 -132 1198 257 76 34 chr5 91527771 91528180 -111557352 - LTR16A LTR ERVL 0 450 25 5188 177 11 0 chr5 91530335 91531250 -111554282 - L1PA8 LINE L1 -2 6170 5211 5147 149 16 14 chr5 91532304 91533369 -111552163 - L1MB2 LINE L1 0 6171 5114 2218 122 3 3 chr5 91534935 91535246 -111550286 - AluSx SINE Alu -1 311 1 223 336 74 41 chr5 91535331 91535453 -111550079 - MIR3 SINE MIR -30 178 53 545 217 178 0 chr5 91535642 91535771 -111549761 + MIR3 SINE MIR 36 187 -21 442 217 57 0 chr5 91536403 91536509 -111549023 - MER94 DNA DNA -17 117 6 294 291 79 47 chr5 91536805 91536932 -111548600 + MIR3 SINE MIR 53 183 -25 486 0 0 0 chr5 91537628 91537682 -111547850 + (TG)n Simple_repeat Simple_repeat 2 55 0 188 139 0 23 chr5 91537891 91537934 -111547598 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2186 89 0 0 chr5 91539330 91539610 -111545922 - AluSg SINE Alu -30 280 1 2305 199 117 54 chr5 91540380 91541157 -111544375 + LTR1B LTR ERV1 1 826 0 705 214 6 24 chr5 91541449 91541617 -111543915 - L1PB4 LINE L1 -1 6155 5991 331 237 36 0 chr5 91541709 91541800 -111543732 + MIR3 SINE MIR 73 168 -40 195 330 97 10 chr5 91541896 91541999 -111543533 - MIR SINE MIR -37 225 114 1778 182 32 47 chr5 91542120 91542683 -111542849 + MLT2A2 LTR ERVL 2 554 0 381 301 10 10 chr5 91542725 91542828 -111542704 - MER5A DNA MER1_type -83 106 4 5199 227 76 19 chr5 91542833 91544929 -111540603 - L1MEc LINE L1 -2154 4061 1900 1974 158 25 17 chr5 91544929 91545291 -111540241 - MER47A DNA MER2_type 0 366 2 5199 227 76 19 chr5 91545291 91545327 -111540205 - L1MEc LINE L1 -4315 1900 1867 2605 249 74 94 chr5 91546285 91547282 -111538250 - L1MEc LINE L1 -4537 1859 843 2424 118 16 16 chr5 91547282 91547646 -111537886 + THE1B LTR MaLR 1 364 0 2605 249 74 94 chr5 91547646 91548100 -111537432 - L1MEc LINE L1 -5553 843 381 1365 164 78 78 chr5 91548100 91548473 -111537059 + THE1C LTR MaLR 1 373 -2 9434 118 57 14 chr5 91548475 91549991 -111535541 + THE1C-int LTR MaLR 1 1580 0 1575 126 61 116 chr5 91549992 91550334 -111535198 + THE1C LTR MaLR 2 321 -54 2419 75 0 0 chr5 91550334 91550626 -111534906 + AluY SINE Alu 1 292 -19 1575 126 61 116 chr5 91550626 91550679 -111534853 + THE1C LTR MaLR 321 375 0 2605 249 74 94 chr5 91550679 91551061 -111534471 - L1MEc LINE L1 -6015 381 57 1010 288 115 37 chr5 91551076 91551314 -111534218 + L2 LINE L2 2686 2904 -409 3405 122 34 2 chr5 91551314 91551821 -111533711 - MER1A DNA MER1_type 0 527 5 1010 288 115 37 chr5 91551821 91552163 -111533369 + L2 LINE L2 2904 3310 -3 370 247 21 113 chr5 91554241 91554282 -111531250 - MER5B DNA MER1_type -1 177 134 2400 76 0 7 chr5 91554282 91554584 -111530948 - AluY SINE Alu -11 300 1 370 247 21 113 chr5 91554584 91554736 -111530796 - MER5B DNA MER1_type -44 134 2 526 264 28 60 chr5 91555402 91555584 -111529948 + MER5B DNA MER1_type 2 177 -1 314 354 55 12 chr5 91556520 91556684 -111528848 + MIR SINE MIR 77 247 -15 347 297 9 0 chr5 91556898 91557009 -111528523 + (CA)n Simple_repeat Simple_repeat 2 113 0 259 137 39 0 chr5 91559549 91559600 -111525932 + MLT1K LTR MaLR 529 581 -7 2598 216 89 21 chr5 91560655 91561899 -111523633 + L1ME2 LINE L1 4643 5997 -167 276 53 0 0 chr5 91561899 91561937 -111523595 + (TG)n Simple_repeat Simple_repeat 2 39 0 2598 216 89 21 chr5 91561937 91562036 -111523496 + L1ME2 LINE L1 5997 6088 -76 22 0 0 0 chr5 91562456 91562478 -111523054 + AT_rich Low_complexity Low_complexity 1 22 0 2316 162 45 9 chr5 91562700 91563119 -111522413 + Tigger2a DNA MER2_type 1 434 0 461 200 207 14 chr5 91563348 91563488 -111522044 - LTR16A1 LTR ERVL 0 457 291 655 276 51 86 chr5 91564256 91564607 -111520925 + L2 LINE L2 2960 3298 -15 358 367 25 0 chr5 91565447 91565605 -111519927 + MIR3 SINE MIR 47 208 0 876 218 21 63 chr5 91566394 91566633 -111518899 - MIR SINE MIR 0 262 34 1974 207 100 11 chr5 91567252 91567702 -111517830 + MLT2B1 LTR ERVL 1 534 -20 263 113 19 0 chr5 91567702 91567755 -111517777 + (TA)n Simple_repeat Simple_repeat 2 55 0 283 170 0 0 chr5 91567773 91567826 -111517706 + MLT2B1 LTR ERVL 465 517 -3 284 245 71 110 chr5 91567867 91567888 -111517644 - MIR SINE MIR -49 213 193 2390 90 0 3 chr5 91567888 91568200 -111517332 - AluY SINE Alu 0 311 1 284 245 71 110 chr5 91568200 91568333 -111517199 - MIR SINE MIR -69 193 65 3558 188 22 11 chr5 91568363 91569092 -111516440 + L1MB2 LINE L1 5433 6169 -2 385 323 98 24 chr5 91569151 91569214 -111516318 - MIR SINE MIR -72 190 133 1731 180 132 22 chr5 91569214 91569669 -111515863 + MLT1D LTR MaLR 1 505 0 385 323 98 24 chr5 91569669 91569769 -111515763 - MIR SINE MIR -129 133 15 348 168 141 121 chr5 91570239 91570388 -111515144 - L1ME2 LINE L1 -11 6153 6002 2917 152 77 63 chr5 91570708 91571425 -111514107 + LTR8A LTR ERV1 1 727 0 306 328 122 0 chr5 91572583 91572772 -111512760 + MIR SINE MIR 26 237 -25 2278 115 27 27 chr5 91572772 91573147 -111512385 + THE1C LTR MaLR 1 375 0 28 0 0 0 chr5 91573562 91573590 -111511942 + AT_rich Low_complexity Low_complexity 1 28 0 310 372 15 0 chr5 91573722 91573859 -111511673 + MIR3 SINE MIR 69 207 -1 25 0 0 0 chr5 91574116 91574141 -111511391 + AT_rich Low_complexity Low_complexity 1 25 0 1484 161 333 29 chr5 91574149 91574626 -111510906 - LTR29 LTR ERV1 0 622 1 575 311 53 13 chr5 91574636 91574861 -111510671 + Charlie8 DNA MER1_type 1 234 -2183 221 121 94 13 chr5 91575251 91575400 -111510132 + (TA)n Simple_repeat Simple_repeat 1 161 0 426 291 66 22 chr5 91575474 91575793 -111509739 + L1ME3 LINE L1 4459 4791 -1355 1465 207 45 102 chr5 91575849 91576448 -111509084 + L1MC5 LINE L1 6702 7266 -695 1624 244 74 15 chr5 91576456 91576984 -111508548 - MER74B LTR ERVL -9 613 55 1307 228 34 39 chr5 91577041 91577405 -111508127 + MLT1A1 LTR MaLR 1 455 -2 866 226 59 108 chr5 91577406 91577916 -111507616 + L1MC5 LINE L1 7397 7881 -80 22 35 0 0 chr5 91577929 91577958 -111507574 + AT_rich Low_complexity Low_complexity 1 29 0 359 306 91 13 chr5 91578041 91578379 -111507153 + L1ME3 LINE L1 5569 5939 -223 534 70 0 0 chr5 91580266 91580337 -111505195 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 239 32 32 0 chr5 91580338 91580369 -111505163 + U2 snRNA snRNA 4 35 -153 549 250 53 7 chr5 91581400 91581552 -111503980 - MIR SINE MIR -51 211 53 24 53 0 0 chr5 91581792 91581830 -111503702 + AT_rich Low_complexity Low_complexity 1 38 0 228 223 87 48 chr5 91582040 91582143 -111503389 - L1ME3A LINE L1 -221 5949 5843 2149 89 4 4 chr5 91582192 91582504 -111503028 - AluSc SINE Alu 0 312 1 503 304 70 19 chr5 91583794 91584008 -111501524 + MIR SINE MIR 18 242 -20 310 105 291 35 chr5 91585440 91585526 -111500006 + L1ME1 LINE L1 6057 6164 -2 370 267 35 43 chr5 91585600 91585716 -111499816 + MIR SINE MIR 32 146 -62 2433 77 3 6 chr5 91585776 91586088 -111499444 - AluY SINE Alu 0 311 1 712 188 0 8 chr5 91586107 91586235 -111499297 - FLAM_C SINE Alu -16 127 1 2233 129 16 14 chr5 91588970 91589333 -111496199 - THE1B LTR MaLR 0 364 1 508 300 62 0 chr5 91589380 91589540 -111495992 + MER117 DNA MER1_type 6 175 -22 1484 175 24 34 chr5 91590281 91590573 -111494959 - AluJo SINE Alu -23 289 1 2148 107 0 3 chr5 91590673 91590963 -111494569 - AluY SINE Alu -22 289 1 477 263 101 20 chr5 91591047 91591245 -111494287 + L2 LINE L2 3100 3313 0 1299 99 14 19 chr5 91592107 91592319 -111493213 - L1PA11 LINE L1 0 6174 5964 234 0 0 0 chr5 91593469 91593495 -111492037 + (T)n Simple_repeat Simple_repeat 1 26 0 863 153 0 0 chr5 91595037 91595168 -111490364 + FLAM_C SINE Alu 1 131 -2 688 262 55 0 chr5 91595454 91595637 -111489895 + MIR SINE MIR 57 249 -13 189 356 42 42 chr5 91595827 91595945 -111489587 + L2 LINE L2 3186 3303 -10 2151 104 3 25 chr5 91596444 91596761 -111488771 + AluSg SINE Alu 1 310 0 806 171 0 0 chr5 91597540 91597669 -111487863 - AluSq/x SINE Alu -183 129 1 1979 157 73 14 chr5 91597860 91598204 -111487328 - THE1B LTR MaLR 0 364 1 243 105 0 0 chr5 91598488 91598526 -111487006 + MIR SINE MIR 104 141 -121 21 0 0 0 chr5 91598772 91598793 -111486739 + AT_rich Low_complexity Low_complexity 1 21 0 282 299 19 57 chr5 91598850 91599007 -111486525 + L2 LINE L2 1869 2019 -1295 737 296 61 12 chr5 91599010 91599257 -111486275 + MIR SINE MIR 4 262 0 319 350 99 18 chr5 91599267 91599550 -111485982 + L2 LINE L2 2046 2351 -963 375 300 8 8 chr5 91600597 91600717 -111484815 - L2 LINE L2 -5 3308 3189 332 300 20 10 chr5 91600835 91600935 -111484597 - L1MC4 LINE L1 -1328 6714 6614 570 273 48 93 chr5 91602623 91603041 -111482491 + L1MC4 LINE L1 7326 7724 -318 458 90 15 0 chr5 91603041 91603108 -111482424 - LTR12 LTR ERV1 -270 444 377 330 262 10 0 chr5 91603109 91603212 -111482320 - LTR30 LTR ERV1 -80 642 539 838 57 153 0 chr5 91603212 91603336 -111482196 - pTR5 LTR ERV1 -418 2020 1878 971 109 0 0 chr5 91603336 91603464 -111482068 - AluSc SINE Alu -181 128 1 284 289 88 0 chr5 91603560 91603674 -111481858 + MIR SINE MIR 81 204 -58 783 259 27 0 chr5 91603841 91604026 -111481506 - LTR33 LTR ERVL -323 198 9 279 259 25 12 chr5 91604164 91604245 -111481287 - MLT1K LTR MaLR -350 238 157 186 313 0 0 chr5 91604334 91604382 -111481150 + L2 LINE L2 3251 3298 -15 34 24 0 0 chr5 91605400 91605441 -111480091 + AT_rich Low_complexity Low_complexity 1 41 0 230 230 250 40 chr5 91606101 91606201 -111479331 + MIR SINE MIR 28 148 -114 291 328 103 20 chr5 91606439 91606692 -111478840 + L1ME3A LINE L1 5623 5896 -274 229 266 0 16 chr5 91606826 91606890 -111478642 + GA-rich Low_complexity Low_complexity 3 65 0 542 280 32 16 chr5 91607136 91607322 -111478210 + MER5A DNA MER1_type 1 189 0 2661 107 33 35 chr5 91607421 91607880 -111477652 - L1MA5 LINE L1 -2 6298 5841 2174 126 3 0 chr5 91609962 91610272 -111475260 + AluSp SINE Alu 1 311 -2 187 260 280 20 chr5 91610524 91610624 -111474908 + MER5A DNA MER1_type 36 161 -28 22 0 0 0 chr5 91611091 91611113 -111474419 + AT_rich Low_complexity Low_complexity 1 22 0 1633 233 109 59 chr5 91611284 91611778 -111473754 - MLT1E LTR MaLR -49 544 26 1618 151 30 12 chr5 91611781 91612184 -111473348 + L1MB7 LINE L1 5138 5540 -634 684 215 27 44 chr5 91612184 91612458 -111473074 + MER31B LTR ERV1 8 390 -76 313 210 16 0 chr5 91612438 91612500 -111473032 + MER67D LTR ERV1 440 502 -12 * 3086 167 37 13 chr5 91612556 91613180 -111472352 + L1MB7 LINE L1 5537 6175 -9 1149 193 161 29 chr5 91613184 91613500 -111472032 - LTR49 LTR ERV1 0 595 238 478 234 36 22 chr5 91663539 91663676 -111421856 - MIR SINE MIR -67 195 57 1204 269 90 60 chr5 91664007 91664999 -111420533 - HAL1 LINE L1 -722 1785 764 274 365 10 10 chr5 91665677 91665781 -111419751 + MER5B DNA MER1_type 73 176 -2 483 275 48 30 chr5 91666399 91666566 -111418966 - MER5A DNA MER1_type -18 171 2 247 207 0 52 chr5 91668118 91668176 -111417356 - L2 LINE L2 -1 3271 3217 2133 90 10 3 chr5 91669206 91669494 -111416038 + AluSg SINE Alu 1 290 -20 5088 135 29 3 chr5 91669904 91670756 -111414776 + L1MA5 LINE L1 5423 6296 -4 23 33 0 0 chr5 91670783 91670813 -111414719 + AT_rich Low_complexity Low_complexity 1 30 0 883 282 29 22 chr5 91671540 91671813 -111413719 + MLT1H LTR MaLR 1 275 -274 3273 86 4 7 chr5 91672200 91672652 -111412880 + L1PA7 LINE L1 5686 6136 -18 341 325 71 58 chr5 91672796 91673230 -111412302 - L1M4 LINE L1 -757 5887 5448 325 375 96 20 chr5 91673226 91673666 -111411866 - L1M4 LINE L1 -3315 3329 2857 * 5606 223 44 41 chr5 91673919 91674487 -111411045 - L1M4 LINE L1 -4791 1855 1291 270 0 0 0 chr5 91674487 91674517 -111411015 + (TA)n Simple_repeat Simple_repeat 2 31 0 5606 223 44 41 chr5 91674517 91675765 -111409767 - L1M4 LINE L1 -5355 1291 12 205 182 0 0 chr5 91676004 91676037 -111409495 + polypyrimidine Low_complexity Low_complexity 3 35 0 5798 171 15 10 chr5 91676065 91677267 -111408265 - L1MC1 LINE L1 -6 6327 5122 801 283 101 43 chr5 91677407 91678082 -111407450 - HAL1b LINE L1 -515 833 120 22 0 0 0 chr5 91678226 91678248 -111407284 + AT_rich Low_complexity Low_complexity 1 22 0 44 56 0 0 chr5 91679880 91679952 -111405580 + AT_rich Low_complexity Low_complexity 1 72 0 21 0 0 0 chr5 91680059 91680080 -111405452 + AT_rich Low_complexity Low_complexity 1 21 0 235 239 28 92 chr5 91680235 91680344 -111405188 - L2 LINE L2 -433 2881 2780 1566 200 49 25 chr5 91680367 91680732 -111404800 - MLT1A2 LTR MaLR 0 374 1 28 29 0 0 chr5 91680851 91680886 -111404646 + AT_rich Low_complexity Low_complexity 1 35 0 1965 111 19 4 chr5 91681005 91681275 -111404257 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr5 91681276 91681303 -111404229 + (TC)n Simple_repeat Simple_repeat 2 28 0 222 37 0 0 chr5 91681302 91681329 -111404203 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 2184 169 73 47 chr5 91681476 91681968 -111403564 + MLT1D LTR MaLR 1 505 0 196 323 118 21 chr5 91685510 91685603 -111399929 + L2 LINE L2 3155 3256 -16 25 83 0 0 chr5 91685779 91685839 -111399693 + AT_rich Low_complexity Low_complexity 1 60 0 1019 223 121 0 chr5 91685847 91686071 -111399461 - MIR SINE MIR -3 259 9 2247 80 0 28 chr5 91687246 91687557 -111397975 + AluY SINE Alu 1 303 0 339 311 207 0 chr5 91687577 91687712 -111397820 - HAL1 LINE L1 -607 1900 1738 2908 139 49 9 chr5 91687779 91688305 -111397227 + LTR10A LTR ERV1 1 547 -62 491 280 0 6 chr5 91688364 91688521 -111397011 - HAL1 LINE L1 -897 1610 1455 210 37 0 0 chr5 91688581 91688608 -111396924 + (CA)n Simple_repeat Simple_repeat 2 28 0 437 259 34 75 chr5 91688609 91688760 -111396772 - HAL1 LINE L1 -1258 1249 1114 1999 136 48 0 chr5 91688760 91689055 -111396477 - AluSx SINE Alu -3 309 1 437 259 34 75 chr5 91689055 91689197 -111396335 - HAL1 LINE L1 -1393 1114 968 220 284 68 14 chr5 91689213 91689287 -111396245 + MIR SINE MIR 21 98 -164 1328 242 55 19 chr5 91689288 91689710 -111395822 + LTR47B LTR ERVL 1 437 -6 642 281 6 0 chr5 91689716 91689883 -111395649 + MIR SINE MIR 95 262 0 186 43 0 0 chr5 91689960 91689983 -111395549 + (TA)n Simple_repeat Simple_repeat 1 23 0 1965 179 32 45 chr5 91691023 91691486 -111394046 - MSTB2 LTR MaLR 0 457 1 232 333 28 28 chr5 91691567 91691675 -111393857 - MIR SINE MIR -99 163 56 23 0 0 0 chr5 91691790 91691813 -111393719 + AT_rich Low_complexity Low_complexity 1 23 0 764 258 31 31 chr5 91693702 91693962 -111391570 + MIR SINE MIR 2 261 -1 342 315 79 39 chr5 91694080 91694334 -111391198 - L2 LINE L2 -881 2433 2170 1818 182 13 0 chr5 91695743 91696051 -111389481 - AluJo SINE Alu 0 312 1 394 304 49 0 chr5 91697697 91697799 -111387733 - L2 LINE L2 -50 3222 3116 326 317 15 39 chr5 91698112 91698320 -111387212 + MLT1I LTR MaLR 31 201 -208 240 252 26 104 chr5 91698455 91698570 -111386962 + MLT1H LTR MaLR 428 533 -16 234 0 0 0 chr5 91698866 91698892 -111386640 + (TA)n Simple_repeat Simple_repeat 2 27 0 2310 81 0 39 chr5 91698892 91699201 -111386331 - AluY SINE Alu -14 297 1 687 209 0 0 chr5 91700440 91700555 -111384977 + FLAM_C SINE Alu 5 119 -24 189 74 0 0 chr5 91701215 91701242 -111384290 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2327 98 0 13 chr5 91701382 91701698 -111383834 - AluSx SINE Alu 0 312 1 1066 238 52 19 chr5 91702381 91702688 -111382844 - MLT1B LTR MaLR 0 390 74 236 146 24 0 chr5 91702790 91702831 -111382701 - MLT1B LTR MaLR -425 42 1 40467 36 24 1 chr5 91704839 91710856 -111374676 + L1PA3 LINE L1 1 6155 0 28 48 0 0 chr5 91710856 91710898 -111374634 + AT_rich Low_complexity Low_complexity 1 42 0 32231 50 5 0 chr5 91711856 91717208 -111368324 + L1PA3 LINE L1 773 6155 0 28 48 0 0 chr5 91717208 91717250 -111368282 + AT_rich Low_complexity Low_complexity 1 42 0 236 146 73 12 chr5 91718594 91718676 -111366856 + CT-rich Low_complexity Low_complexity 5 91 0 2502 159 23 2 chr5 91718796 91719442 -111366090 + MER50 LTR ERV1 1 711 -23 28 29 0 0 chr5 91720413 91720448 -111365084 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 91721307 91721330 -111364202 + AT_rich Low_complexity Low_complexity 1 23 0 2764 101 23 7 chr5 91721638 91722059 -111363473 - L1PA13 LINE L1 -33 6130 5700 378 326 65 47 chr5 91722064 91722214 -111363318 + L1ME4a LINE L1 4029 4175 -1971 1945 150 16 3 chr5 91722214 91722521 -111363011 + AluSq SINE Alu 3 313 0 378 326 65 47 chr5 91722521 91722710 -111362822 + L1ME4a LINE L1 4175 4374 -1772 39898 77 8 0 chr5 91722818 91728167 -111357365 + L1PA4 LINE L1 15 5402 -744 342 25 0 0 chr5 91728181 91728221 -111357311 + L1P LINE L1 11 50 -6096 6696 22 3 0 chr5 91728221 91729003 -111356529 + L1PA4 LINE L1 5369 6152 -3 3041 44 0 8 chr5 91729148 91729534 -111355998 + L1PA5 LINE L1 5770 6152 -2 838 200 94 36 chr5 91729535 91729865 -111355667 + L1MC5 LINE L1 7340 7688 -273 24 53 0 0 chr5 91729983 91730021 -111355511 + AT_rich Low_complexity Low_complexity 1 38 0 287 263 58 96 chr5 91730187 91730531 -111355001 + L1ME4a LINE L1 5295 5625 -496 226 235 56 67 chr5 91730724 91730903 -111354629 + L1ME4a LINE L1 5934 6110 -11 363 250 79 65 chr5 91731197 91731413 -111354119 + MER20B DNA MER1_type 1 219 0 2280 94 0 0 chr5 91732526 91732824 -111352708 + AluY SINE Alu 1 298 -13 2372 100 0 0 chr5 91733265 91733576 -111351956 + AluSx SINE Alu 1 311 -1 5515 261 69 22 chr5 91733802 91735094 -111350438 + L1MEc LINE L1 36 1458 -4938 1954 150 0 26 chr5 91735094 91735400 -111350132 + AluJb SINE Alu 9 306 -6 5515 261 69 22 chr5 91735400 91736117 -111349415 + L1MEc LINE L1 1458 2140 -4256 4938 248 78 48 chr5 91736217 91736546 -111348986 + L1MEc LINE L1 2418 2736 -3503 2429 67 3 10 chr5 91736546 91736858 -111348674 - AluY SINE Alu -1 310 1 4938 248 78 48 chr5 91736858 91738493 -111347039 + L1MEc LINE L1 2736 4320 -1919 1783 176 7 0 chr5 91738493 91738782 -111346750 - AluJb SINE Alu -21 291 1 4938 248 78 48 chr5 91738782 91740048 -111345484 + L1MEc LINE L1 4320 5771 -468 288 77 0 0 chr5 91740048 91740087 -111345445 + (CA)n Simple_repeat Simple_repeat 2 40 0 4938 248 78 48 chr5 91740087 91740561 -111344971 + L1MEc LINE L1 5771 6229 -10 844 227 16 0 chr5 91740957 91741142 -111344390 + MIR SINE MIR 34 221 -41 21 0 0 0 chr5 91742338 91742359 -111343173 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr5 91742660 91742702 -111342830 + (CA)n Simple_repeat Simple_repeat 2 43 0 418 333 95 9 chr5 91742712 91742922 -111342610 + MIR SINE MIR 20 247 -15 850 338 120 6 chr5 91742950 91743632 -111341900 - L2 LINE L2 -9 3304 2544 255 324 113 7 chr5 91745149 91745330 -111340202 - MIR SINE MIR -6 256 61 189 330 41 88 chr5 91745700 91745894 -111339638 - MIR3 SINE MIR -7 201 17 5136 176 54 16 chr5 91746265 91746991 -111338541 + L1MA4 LINE L1 3 777 -4551 2250 95 0 13 chr5 91746991 91747296 -111338236 + AluSq SINE Alu 1 301 -12 5136 176 54 16 chr5 91747296 91747554 -111337978 + L1MA4 LINE L1 777 1024 -4304 1734 186 140 18 chr5 91747877 91748360 -111337172 - LTR10A LTR ERV1 -43 590 1 5677 254 13 27 chr5 91748360 91749350 -111336182 - LTR10A-int LTR ERV1 -1 6648 5685 6095 62 16 1 chr5 91749350 91750119 -111335413 - LTR17 LTR ERV1 0 780 1 5677 254 13 27 chr5 91750119 91750642 -111334890 - LTR10A-int LTR ERV1 -964 5685 5156 7585 107 30 14 chr5 91750685 91751121 -111334411 - Harlequin LTR ERV1 -3875 3021 2594 2418 74 0 22 chr5 91751121 91751432 -111334100 - AluY SINE Alu -7 304 1 7585 107 30 14 chr5 91751432 91751838 -111333694 - Harlequin LTR ERV1 -4302 2594 2151 2429 70 0 0 chr5 91751838 91752136 -111333396 - AluY SINE Alu -13 298 1 7585 107 30 14 chr5 91752136 91752472 -111333060 - Harlequin LTR ERV1 -4745 2151 1822 314 210 210 0 chr5 91752478 91752559 -111332973 + LTR8 LTR ERV1 156 253 -438 5413 104 1 40 chr5 91752561 91753555 -111331977 - LTR10A-int LTR ERV1 -5176 1720 719 257 183 118 86 chr5 91753544 91753637 -111331895 - LTR10A-int LTR ERV1 -5579 1070 975 * 1182 220 79 112 chr5 91753707 91754339 -111331193 - LTR10A-int LTR ERV1 -6033 616 6 1444 182 87 26 chr5 91754357 91754703 -111330829 - LTR10A LTR ERV1 -64 545 179 306 245 161 58 chr5 91754758 91755019 -111330513 - LTR10A LTR ERV1 -309 300 13 2785 228 32 13 chr5 91757310 91758060 -111327472 + L1MA4 LINE L1 1017 1780 -4548 703 123 16 0 chr5 91758060 91758182 -111327350 + GA-rich Low_complexity Low_complexity 4 127 0 1706 220 54 39 chr5 91758182 91758490 -111327042 + L1MA4 LINE L1 1769 2092 -4236 2265 106 7 0 chr5 91758490 91758791 -111326741 + AluSq SINE Alu 2 304 -9 1706 220 54 39 chr5 91758791 91759077 -111326455 + L1MA4 LINE L1 2092 2372 -3956 2041 75 8 0 chr5 91759077 91759331 -111326201 + AluY SINE Alu 1 256 -55 1655 82 41 5 chr5 91759331 91759548 -111325984 - AluSg SINE Alu -83 227 1 10083 166 38 18 chr5 91759548 91762593 -111322939 + L1MA4 LINE L1 3377 6482 0 856 178 83 6 chr5 91763100 91763269 -111322263 - MER5A DNA MER1_type -7 182 1 1972 113 56 0 chr5 91765537 91765821 -111319711 - AluSx SINE Alu -12 300 1 486 49 0 0 chr5 91766080 91766141 -111319391 + (TCCTG)n Simple_repeat Simple_repeat 2 62 0 223 238 0 40 chr5 91766766 91766867 -111318665 + (TAAA)n Simple_repeat Simple_repeat 4 100 0 222 242 30 0 chr5 91766906 91767005 -111318527 + (TA)n Simple_repeat Simple_repeat 1 102 0 429 341 49 8 chr5 91768142 91768388 -111317144 - L2 LINE L2 -736 2578 2323 682 266 202 0 chr5 91769906 91770173 -111315359 - MLT1K LTR MaLR -115 473 153 537 274 60 105 chr5 91770842 91771108 -111314424 + MIR SINE MIR 8 261 -1 28 29 0 0 chr5 91772124 91772159 -111313373 + AT_rich Low_complexity Low_complexity 1 35 0 333 322 0 0 chr5 91772291 91772378 -111313154 + L2 LINE L2 3193 3279 -34 181 261 29 43 chr5 91772419 91772488 -111313044 - L2 LINE L2 -1 3312 3245 2264 70 21 3 chr5 91772581 91772865 -111312667 + AluY SINE Alu 8 296 -15 217 286 19 76 chr5 91773266 91773371 -111312161 - MIR SINE MIR -50 212 114 543 273 20 0 chr5 91774285 91774429 -111311103 - MIR3 SINE MIR -7 201 56 341 273 133 16 chr5 91774926 91775054 -111310478 + MER5A DNA MER1_type 20 162 -27 614 234 84 6 chr5 91775250 91775417 -111310115 - MER104 DNA Tc2 0 180 1 30 27 0 0 chr5 91776128 91776165 -111309367 + AT_rich Low_complexity Low_complexity 1 37 0 709 273 152 35 chr5 91776902 91777335 -111308197 + LTR33A LTR ERVL 40 523 0 30 27 0 0 chr5 91778287 91778324 -111307208 + AT_rich Low_complexity Low_complexity 1 37 0 222 316 51 13 chr5 91780072 91780151 -111305381 + MIR3 SINE MIR 14 95 -113 347 292 103 46 chr5 91780197 91780392 -111305140 - MIR SINE MIR -51 211 6 249 324 27 103 chr5 91780326 91780511 -111305021 + MIR3 SINE MIR 37 207 -1 * 296 265 304 22 chr5 91781492 91781673 -111303859 - MIR SINE MIR -27 235 4 27 0 0 0 chr5 91782323 91782350 -111303182 + AT_rich Low_complexity Low_complexity 1 27 0 397 283 160 53 chr5 91782577 91782934 -111302598 + MLT1J LTR MaLR 115 509 -2 200 427 100 7 chr5 91786403 91786862 -111298670 - L2 LINE L2 -559 2755 2254 218 274 0 0 chr5 91787093 91787144 -111298388 + L2 LINE L2 3263 3313 0 1984 125 7 7 chr5 91787394 91787690 -111297842 + AluSx SINE Alu 1 296 -16 227 146 0 0 chr5 91788025 91788073 -111297459 - LTR66 LTR ERVL -169 441 394 246 220 0 0 chr5 91788075 91788134 -111297398 + (TA)n Simple_repeat Simple_repeat 1 59 0 22 0 0 0 chr5 91788199 91788221 -111297311 + AT_rich Low_complexity Low_complexity 1 22 0 2224 126 0 0 chr5 91789619 91789928 -111295604 - AluSc SINE Alu 0 309 1 223 330 22 70 chr5 91790226 91790365 -111295167 - MIR SINE MIR -42 220 91 2060 136 72 17 chr5 91790365 91790710 -111294822 - THE1B LTR MaLR 0 364 1 223 330 22 70 chr5 91790710 91790755 -111294777 - MIR SINE MIR -171 91 45 428 253 208 28 chr5 91790921 91791099 -111294433 + MIR SINE MIR 5 214 -48 327 319 52 15 chr5 91791975 91792110 -111293422 - MLT1L LTR MaLR 0 615 476 412 333 177 0 chr5 91793559 91793745 -111291787 - MIR SINE MIR -7 255 37 1749 130 8 8 chr5 91793746 91794008 -111291524 + AluSx SINE Alu 34 295 -17 966 333 151 35 chr5 91794963 91795373 -111290159 - L3 LINE CR1 -322 1255 894 2333 52 42 0 chr5 91795373 91795659 -111289873 - AluY SINE Alu -13 298 1 966 333 151 35 chr5 91795659 91795989 -111289543 - L3 LINE CR1 -683 894 429 809 259 214 35 chr5 91796237 91796635 -111288897 - L2 LINE L2 -18 3295 2827 270 327 59 20 chr5 91796654 91796807 -111288725 + MER20B DNA MER1_type 2 160 -623 2500 62 3 0 chr5 91796824 91797132 -111288400 + AluY SINE Alu 1 309 -2 1220 294 44 39 chr5 91797196 91797631 -111287901 - L2 LINE L2 -517 2797 2361 451 304 9 9 chr5 91800840 91800955 -111284577 + L2 LINE L2 3154 3268 -4 2455 62 0 0 chr5 91801856 91802148 -111283384 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 91802603 91802624 -111282908 + AT_rich Low_complexity Low_complexity 1 21 0 1496 167 27 27 chr5 91802943 91803237 -111282295 - AluJb SINE Alu -16 296 3 2551 45 0 0 chr5 91803409 91803719 -111281813 + L1PA7 LINE L1 5842 6151 -3 271 257 71 53 chr5 91803820 91803933 -111281599 - MIR SINE MIR -82 180 66 204 319 148 58 chr5 91804633 91805012 -111280520 - L2 LINE L2 -463 2851 2439 186 43 0 0 chr5 91805044 91805067 -111280465 + (GA)n Simple_repeat Simple_repeat 2 24 0 293 68 23 0 chr5 91806365 91806409 -111279123 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 2081 130 3 7 chr5 91806665 91806972 -111278560 - AluSx SINE Alu -2 310 5 25 0 0 0 chr5 91807086 91807111 -111278421 + AT_rich Low_complexity Low_complexity 1 25 0 322 221 105 0 chr5 91807831 91807917 -111277615 + L1MC3 LINE L1 7084 7178 -607 8255 159 23 0 chr5 91807954 91809255 -111276277 + L1M1 LINE L1 16 1346 -6219 328 254 116 43 chr5 91809349 91809487 -111276045 + L3 LINE CR1 553 700 -877 22 0 0 0 chr5 91809507 91809529 -111276003 + AT_rich Low_complexity Low_complexity 1 22 0 400 356 34 6 chr5 91809611 91809788 -111275744 + L3 LINE CR1 1355 1536 -41 27 29 0 0 chr5 91810604 91810638 -111274894 + AT_rich Low_complexity Low_complexity 1 34 0 190 255 137 0 chr5 91810695 91810746 -111274786 - L2 LINE L2 -1 3271 3214 5348 159 36 36 chr5 91811196 91812269 -111273263 + L1MC3 LINE L1 6705 7777 -8 1021 200 85 23 chr5 91812561 91812866 -111272666 + MER33 DNA MER1_type 1 324 0 682 78 0 0 chr5 91817059 91817149 -111268383 - AluSg/x SINE Alu -13 297 208 2322 89 3 0 chr5 91818167 91818460 -111267072 - AluSp SINE Alu -17 296 3 636 301 77 0 chr5 91818586 91818782 -111266750 + MIR SINE MIR 20 230 -32 908 204 23 6 chr5 91818931 91819103 -111266429 - MER5A DNA MER1_type -1 188 14 534 330 36 13 chr5 91819415 91819639 -111265893 + MIR SINE MIR 15 243 -19 427 218 139 0 chr5 91821721 91821822 -111263710 - FLAM_C SINE Alu -26 117 3 1563 154 20 111 chr5 91822083 91822426 -111263106 - AluJo SINE Alu 0 312 1 2274 102 0 0 chr5 91822811 91823105 -111262427 + AluSx SINE Alu 1 294 -18 349 266 108 59 chr5 91823175 91823536 -111261996 + MLT1H LTR MaLR 69 536 -13 263 322 52 9 chr5 91823743 91823858 -111261674 + LTR67 LTR ERVL 434 553 -4 24 0 0 0 chr5 91824111 91824135 -111261397 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 91825371 91825399 -111260133 + AT_rich Low_complexity Low_complexity 1 28 0 2193 123 0 16 chr5 91825527 91825844 -111259688 - AluSx SINE Alu 0 312 1 304 270 68 25 chr5 91826706 91826869 -111258663 + L1ME4a LINE L1 5728 5897 -224 249 205 84 12 chr5 91826937 91827020 -111258512 + L1ME4a LINE L1 6000 6088 -33 1134 237 128 22 chr5 91828989 91829444 -111256088 + MLT2F LTR ERVL 3 595 -68 344 320 30 0 chr5 91829785 91829885 -111255647 + L2 LINE L2 3145 3247 -25 1964 93 33 0 chr5 91833278 91833578 -111251954 + L1PA13 LINE L1 5854 6163 0 208 125 0 114 chr5 91834283 91834371 -111251161 + (CAAAAA)n Simple_repeat Simple_repeat 1 78 0 24 32 0 0 chr5 91837179 91837210 -111248322 + AT_rich Low_complexity Low_complexity 1 31 0 622 233 86 0 chr5 91838471 91838634 -111246898 - MER20 DNA MER1_type -6 213 37 22 0 0 0 chr5 91839213 91839235 -111246297 + AT_rich Low_complexity Low_complexity 1 22 0 2244 91 0 3 chr5 91839279 91839575 -111245957 + AluSg SINE Alu 1 295 -15 265 274 96 0 chr5 91839607 91839680 -111245852 - L2 LINE L2 0 3272 3193 303 79 0 0 chr5 91839776 91839814 -111245718 + U2 snRNA snRNA 1 38 -150 1888 121 57 0 chr5 91840145 91840426 -111245106 - AluSx SINE Alu -15 297 1 345 203 0 13 chr5 91841986 91842065 -111243467 + MIR SINE MIR 147 224 -38 209 386 55 0 chr5 91844015 91844142 -111241390 + MIR3 SINE MIR 60 193 -15 1158 158 77 14 chr5 91844273 91844495 -111241037 + MER46A DNA MER2_type 1 236 0 201 368 18 9 chr5 91844736 91844850 -111240682 + L2 LINE L2 3178 3292 -21 616 283 128 57 chr5 91845108 91845377 -111240155 + L1M4 LINE L1 4235 4548 -1598 1868 167 75 45 chr5 91845377 91845819 -111239713 + MSTB2 LTR MaLR 1 455 -2 616 283 128 57 chr5 91845819 91845987 -111239545 + L1M4 LINE L1 4548 4703 -1443 1842 139 0 29 chr5 91846254 91846534 -111238998 - AluSx SINE Alu -30 282 11 21 0 0 0 chr5 91846865 91846886 -111238646 + AT_rich Low_complexity Low_complexity 1 21 0 217 224 61 0 chr5 91847118 91847167 -111238365 - MIR SINE MIR -106 156 105 187 271 86 0 chr5 91848290 91848360 -111237172 + L2 LINE L2 2985 3060 -212 21 71 0 0 chr5 91849444 91849486 -111236046 + AT_rich Low_complexity Low_complexity 1 42 0 298 265 0 60 chr5 91850608 91850691 -111234841 + MIR3 SINE MIR 87 164 -44 230 197 239 0 chr5 91851159 91851230 -111234302 - MER5B DNA MER1_type -16 162 75 1490 115 13 18 chr5 91851261 91851487 -111234045 - AluSg/x SINE Alu -23 289 65 496 167 206 8 chr5 91851574 91851700 -111233832 + Charlie1a DNA MER1_type 2 152 -1303 482 296 28 0 chr5 91851797 91851939 -111233593 + MIR SINE MIR 9 154 -108 2266 179 128 12 chr5 91852001 91852503 -111233029 - MER6A DNA MER2_type 0 605 46 306 329 70 70 chr5 91852510 91852939 -111232593 + L2 LINE L2 2468 2896 -418 229 271 0 0 chr5 91853434 91853482 -111232050 + L2 LINE L2 3141 3188 -84 2195 87 4 0 chr5 91853494 91853769 -111231763 - AluSp SINE Alu -17 296 21 2376 78 0 3 chr5 91854184 91854478 -111231054 + AluSc SINE Alu 1 293 -16 339 315 152 17 chr5 91854826 91855004 -111230528 + MIR SINE MIR 49 250 -12 21 0 0 0 chr5 91857873 91857894 -111227638 + AT_rich Low_complexity Low_complexity 1 21 0 1896 138 3 20 chr5 91858251 91858548 -111226984 - AluJb SINE Alu -15 297 6 428 244 0 0 chr5 91858691 91858781 -111226751 + MIR SINE MIR 173 262 0 3396 198 59 10 chr5 91858874 91858964 -111226568 + MER44D DNA MER2_type 1 85 -2402 2324 94 3 0 chr5 91858964 91859262 -111226270 + AluSx SINE Alu 1 299 -13 3396 198 59 10 chr5 91859262 91859869 -111225663 + MER44D DNA MER2_type 85 604 -1 327 297 69 7 chr5 91860223 91860368 -111225164 + L1MA9 LINE L1 6119 6272 -40 379 267 107 0 chr5 91860427 91860558 -111224974 + L2 LINE L2 1681 1825 -1489 1278 235 82 65 chr5 91860559 91860971 -111224561 + L2 LINE L2 2298 2716 -598 1428 173 8 0 chr5 91860995 91861243 -111224289 + L1MD3 LINE L1 7730 7979 -16 1316 265 55 51 chr5 91861262 91861352 -111224180 + L2 LINE L2 2722 2810 -503 1346 129 76 0 chr5 91861352 91861562 -111223970 - MER30 DNA MER1_type -4 226 1 1316 265 55 51 chr5 91861562 91862067 -111223465 + L2 LINE L2 2810 3311 -2 2136 106 0 3 chr5 91862096 91862380 -111223152 - AluSg SINE Alu -11 299 17 263 179 0 0 chr5 91862380 91862419 -111223113 - AluSg SINE Alu -263 39 1 410 300 116 86 chr5 91862480 91862817 -111222715 + L2 LINE L2 2911 3257 -15 2892 128 9 22 chr5 91864950 91865394 -111220138 - Tigger2 DNA MER2_type -1 2717 2280 279 243 0 14 chr5 91865392 91865462 -111220070 - Tigger2 DNA MER2_type -2649 69 1 * 2227 119 0 0 chr5 91865755 91866058 -111219474 + AluSx SINE Alu 1 303 -9 2149 133 0 0 chr5 91866101 91866395 -111219137 + AluSx SINE Alu 1 294 -18 25 75 0 0 chr5 91866961 91867014 -111218518 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 91867382 91867403 -111218129 + AT_rich Low_complexity Low_complexity 1 21 0 912 222 43 5 chr5 91868193 91868378 -111217154 - MER21B LTR ERV1 -111 752 561 730 273 62 13 chr5 91868542 91868769 -111216763 - MER21B LTR ERV1 -313 550 313 745 151 0 8 chr5 91868778 91868897 -111216635 - FRAM SINE Alu -18 158 41 1895 131 52 63 chr5 91868897 91869263 -111216269 + THE1B LTR MaLR 1 362 -2 514 188 54 9 chr5 91869322 91869434 -111216098 - MER21B LTR ERV1 -644 219 103 503 250 9 0 chr5 91869465 91869573 -111215959 - MER21B LTR ERV1 -754 109 1 28 48 0 0 chr5 91869580 91869622 -111215910 + AT_rich Low_complexity Low_complexity 1 42 0 4445 191 39 18 chr5 91869625 91869868 -111215664 - L1MA7 LINE L1 -22 6269 6032 1770 174 47 14 chr5 91869868 91870231 -111215301 - THE1C LTR MaLR 0 375 1 4445 191 39 18 chr5 91870231 91871140 -111214392 - L1MA7 LINE L1 -259 6032 5093 3174 233 64 39 chr5 91871142 91871736 -111213796 + L1M1 LINE L1 3020 3598 -3967 261 0 0 0 chr5 91871736 91871765 -111213767 + (CA)n Simple_repeat Simple_repeat 2 30 0 3174 233 64 39 chr5 91871765 91872530 -111213002 + L1M1 LINE L1 3598 4405 -3160 1168 255 32 28 chr5 91872530 91873001 -111212531 - L1M3a LINE L1 -4298 2053 1581 720 130 22 0 chr5 91873001 91873139 -111212393 + C-rich Low_complexity Low_complexity 4 144 0 831 195 98 4 chr5 91873143 91873399 -111212133 - L1M3a LINE L1 -4678 1603 1324 792 179 0 68 chr5 91873399 91873561 -111211971 - FRAM SINE Alu -16 160 10 1340 293 10 62 chr5 91873569 91874071 -111211461 - L1M3a LINE L1 -4952 1329 854 252 296 52 15 chr5 91874272 91874407 -111211125 - L1M3a LINE L1 -5277 994 855 239 317 98 18 chr5 91874445 91874669 -111210863 - L1M3a LINE L1 -5173 782 344 940 302 110 37 chr5 91874763 91875389 -111210143 - L1M3a LINE L1 -5226 1045 374 423 259 73 73 chr5 91875424 91875698 -111209834 + MER102b DNA MER1_type 67 340 -1 335 191 0 0 chr5 91875957 91876025 -111209507 - MER116 DNA Mariner -5 75 8 425 279 27 0 chr5 91877072 91877183 -111208349 + MER81 DNA DNA 1 114 0 21 0 0 0 chr5 91879709 91879730 -111205802 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 91879758 91879780 -111205752 + AT_rich Low_complexity Low_complexity 1 22 0 744 298 104 33 chr5 91880351 91880744 -111204788 + L3 LINE CR1 550 970 -607 336 336 173 12 chr5 91880804 91881140 -111204392 + L3 LINE CR1 969 1358 -219 306 287 123 8 chr5 91881601 91881723 -111203809 + MIR SINE MIR 49 184 -78 198 0 0 0 chr5 91881730 91881752 -111203780 + (TA)n Simple_repeat Simple_repeat 2 23 0 2211 234 75 24 chr5 91882123 91882793 -111202739 + L1ME3A LINE L1 5465 6168 -2 1000 88 0 0 chr5 91883213 91883338 -111202194 - AluSq/x SINE Alu -188 125 1 257 196 6 25 chr5 91883363 91883429 -111202103 + MIR SINE MIR 90 141 -67 379 304 10 0 chr5 91888041 91888143 -111197389 + MIR SINE MIR 49 151 -111 693 326 124 49 chr5 91888355 91889171 -111196361 + L1MEd LINE L1 126 1002 -5117 2691 112 0 3 chr5 91891282 91891647 -111193885 - THE1B LTR MaLR 0 364 1 10156 103 37 41 chr5 91891647 91892332 -111193200 - THE1B-int LTR MaLR 0 1580 894 2411 78 0 19 chr5 91892332 91892641 -111192891 - AluY SINE Alu -7 304 2 10156 103 37 41 chr5 91892641 91893541 -111191991 - THE1B-int LTR MaLR -686 894 1 2614 90 0 62 chr5 91893541 91893890 -111191642 - THE1B LTR MaLR 0 364 39 1988 101 4 0 chr5 91893890 91894177 -111191355 + AluSp SINE Alu 29 316 0 2614 90 0 62 chr5 91894177 91894214 -111191318 - THE1B LTR MaLR -325 39 1 210 71 0 0 chr5 91894547 91894575 -111190957 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2402 109 0 0 chr5 91895326 91895638 -111189894 - AluSx SINE Alu 0 312 1 205 252 97 87 chr5 91896225 91896328 -111189204 + MIR3 SINE MIR 87 190 -18 444 82 0 0 chr5 91896347 91896408 -111189124 + (TG)n Simple_repeat Simple_repeat 2 62 0 1419 134 22 0 chr5 91896456 91896679 -111188853 - L1PA10 LINE L1 -5 6163 5936 306 0 0 0 chr5 91896727 91896760 -111188772 + (CA)n Simple_repeat Simple_repeat 1 67 0 306 0 0 0 chr5 91896760 91896794 -111188738 + (CA)n Simple_repeat Simple_repeat 1 34 0 1183 296 52 43 chr5 91896896 91897015 -111188517 - MLT1J LTR MaLR -57 454 338 725 254 6 12 chr5 91897015 91897180 -111188352 - FRAM SINE Alu -2 164 1 1183 296 52 43 chr5 91897180 91897506 -111188026 - MLT1J LTR MaLR -173 338 5 22 56 0 0 chr5 91898199 91898235 -111187297 + AT_rich Low_complexity Low_complexity 1 36 0 1653 146 0 78 chr5 91898410 91898775 -111186757 + AluJo SINE Alu 6 345 0 1056 222 56 87 chr5 91899100 91899492 -111186040 - L1ME2 LINE L1 -135 6031 5652 2965 231 98 26 chr5 91899498 91901035 -111184497 - L1ME1 LINE L1 -5 6441 4771 786 259 38 5 chr5 91901035 91901247 -111184285 + MER20 DNA MER1_type 1 219 0 2965 231 98 26 chr5 91901247 91901325 -111184207 - L1ME1 LINE L1 -1675 4771 4700 1516 235 77 37 chr5 91901329 91902619 -111182913 - L1ME1 LINE L1 -3072 3354 2059 * 2009 220 51 69 chr5 91902617 91903326 -111182206 - L1MD2 LINE L1 -13 6346 5651 772 234 98 5 chr5 91903328 91903533 -111181999 + MER58A DNA MER1_type 1 224 0 2623 230 118 33 chr5 91903545 91904401 -111181131 - L1MD2 LINE L1 -521 5645 4639 1908 143 33 7 chr5 91904401 91904702 -111180830 + AluSq SINE Alu 1 309 -4 2623 230 118 33 chr5 91904702 91905189 -111180343 - L1MD2 LINE L1 -1527 4639 4195 2846 226 66 26 chr5 91905213 91905898 -111179634 + MSTD-int LTR MaLR 1024 1735 0 500 196 0 65 chr5 91905898 91905950 -111179582 + MSTD LTR MaLR 1 44 -352 1874 125 52 68 chr5 91905950 91906319 -111179213 + THE1B LTR MaLR 1 363 -1 500 196 0 65 chr5 91906319 91906373 -111179159 + MSTD LTR MaLR 44 100 -296 745 289 13 4 chr5 91906381 91906620 -111178912 - L1ME1 LINE L1 -4616 1991 1751 183 42 0 0 chr5 91906624 91906648 -111178884 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 17510 47 4 1 chr5 91906684 91909635 -111175897 - L1PA5 LINE L1 -8 6146 3179 10675 81 7 5 chr5 91910719 91914616 -111170916 - L1P LINE L1 -1886 4260 260 716 265 35 45 chr5 91914616 91914903 -111170629 + pTR5 LTR ERV1 745 1028 -1410 5031 107 28 64 chr5 91915089 91915946 -111169586 + LTR12 LTR ERV1 1 826 0 1510 128 56 12 chr5 91915946 91916197 -111169335 - L1P LINE L1 -5881 265 4 270 211 31 86 chr5 91916200 91916328 -111169204 - L1ME1 LINE L1 -4803 1623 1407 1495 229 125 27 chr5 91916364 91916997 -111168535 - L1ME1 LINE L1 -5124 1483 789 1007 154 42 50 chr5 91917687 91917927 -111167605 + L1MA9 LINE L1 6047 6284 -28 498 322 41 0 chr5 91918419 91918590 -111166942 + MIR SINE MIR 26 203 -59 2407 209 74 22 chr5 91919752 91920373 -111165159 - L1MC4a LINE L1 -14 7794 7142 687 232 106 30 chr5 91920371 91920386 -111165146 - L1MC4 LINE L1 -1261 6547 6535 * 1804 151 53 24 chr5 91920386 91920723 -111164809 - MER7A DNA MER2_type 0 346 2 687 232 106 30 chr5 91920723 91920922 -111164610 - L1MC4 LINE L1 -1273 6535 6352 1728 194 114 61 chr5 91920922 91921448 -111164084 - MLT2B3 LTR ERVL 0 554 1 687 232 106 30 chr5 91921448 91922548 -111162984 - L1MC4 LINE L1 -1456 6352 5255 460 294 32 0 chr5 91923159 91923285 -111162247 - MIR SINE MIR -128 134 5 225 191 59 0 chr5 91924222 91924290 -111161242 + L1MA5 LINE L1 6229 6300 0 988 286 59 10 chr5 91924357 91924745 -111160787 - L1ME LINE L1 -4601 1660 1254 2229 145 3 0 chr5 91924745 91925103 -111160429 - L1PB3 LINE L1 0 6154 5796 351 0 0 0 chr5 91925105 91925144 -111160388 + (TG)n Simple_repeat Simple_repeat 2 40 0 231 200 40 0 chr5 91925252 91925302 -111160230 + MER7A DNA MER2_type 281 332 -4 1592 268 87 56 chr5 91925414 91925748 -111159784 - L1ME LINE L1 -4999 1083 761 2360 67 0 0 chr5 91925748 91926032 -111159500 - AluY SINE Alu -27 284 1 1592 268 87 56 chr5 91926032 91926799 -111158733 - L1ME LINE L1 -5321 761 2 429 277 0 10 chr5 91927421 91927522 -111158010 + L2 LINE L2 3157 3256 -16 263 293 66 28 chr5 91927805 91927911 -111157621 + MIR SINE MIR 8 117 -145 781 186 0 0 chr5 91927983 91928112 -111157420 + FLAM_A SINE Alu 4 132 -1 2915 134 31 15 chr5 91928130 91928623 -111156909 + L1MA8 LINE L1 5733 6236 -55 1823 136 11 4 chr5 91928623 91928896 -111156636 - AluSx SINE Alu -7 305 31 2915 134 31 15 chr5 91928896 91928923 -111156609 + L1MA8 LINE L1 6236 6261 -30 22 56 0 0 chr5 91928959 91928995 -111156537 + AT_rich Low_complexity Low_complexity 1 36 0 258 323 10 10 chr5 91929006 91929102 -111156430 + MIR SINE MIR 153 248 -14 183 286 39 39 chr5 91929197 91929274 -111156258 + MIR SINE MIR 69 145 -117 222 127 32 32 chr5 91929637 91929700 -111155832 + (TAA)n Simple_repeat Simple_repeat 2 64 0 189 0 0 0 chr5 91931765 91931786 -111153746 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr5 91932486 91932511 -111153021 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2426 82 0 3 chr5 91933190 91933496 -111152036 + AluSg SINE Alu 1 305 -5 1130 182 42 25 chr5 91933572 91934049 -111151483 - L1MD2 LINE L1 -15 6344 5820 1477 106 24 0 chr5 91934053 91934261 -111151271 - AluSg/x SINE Alu -16 294 82 960 184 168 4 chr5 91934283 91934533 -111150999 + L1MC/D LINE L1 5263 5553 -806 1104 192 40 0 chr5 91935140 91935364 -111150168 + MER46A DNA MER2_type 4 236 0 181 348 55 39 chr5 91935687 91935868 -111149664 + L2 LINE L2 2794 2977 -337 307 302 94 47 chr5 91937540 91937815 -111147717 + HAL1 LINE L1 95 382 -2125 1040 258 73 21 chr5 91938225 91938691 -111146841 + HAL1 LINE L1 791 1280 -1227 25 0 0 0 chr5 91940027 91940052 -111145480 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 91940076 91940097 -111145435 + AT_rich Low_complexity Low_complexity 1 21 0 537 212 185 7 chr5 91941781 91941927 -111143605 - MIR SINE MIR -22 240 69 2140 100 0 66 chr5 91941950 91942270 -111143262 - AluSq SINE Alu -14 299 1 2083 91 0 7 chr5 91942743 91943018 -111142514 + AluY SINE Alu 22 294 -17 22 35 0 0 chr5 91943018 91943047 -111142485 + AT_rich Low_complexity Low_complexity 1 29 0 2199 115 10 10 chr5 91943741 91944085 -111141447 - AluSx SINE Alu 0 344 1 1302 112 78 8 chr5 91945333 91945575 -111139957 + L1MA9 LINE L1 6054 6312 0 28 0 0 0 chr5 91945800 91945828 -111139704 + AT_rich Low_complexity Low_complexity 1 28 0 4985 83 7 82 chr5 91946312 91946712 -111138820 - L1PA13 LINE L1 -2 6161 5733 2345 112 0 3 chr5 91946712 91947025 -111138507 - AluSx SINE Alu 0 312 1 4985 83 7 82 chr5 91947025 91947295 -111138237 - L1PA13 LINE L1 -430 5733 5444 1980 134 0 41 chr5 91947295 91947615 -111137917 - AluSx SINE Alu -5 307 1 4985 83 7 82 chr5 91947615 91947721 -111137811 - L1PA13 LINE L1 -719 5444 5450 2053 147 0 0 chr5 91947721 91948020 -111137512 - AluSx SINE Alu -13 299 1 4985 83 7 82 chr5 91948020 91948094 -111137438 - L1PA13 LINE L1 -712 5451 5373 275 218 127 73 chr5 91948287 91948452 -111137080 + L1MEd LINE L1 111 284 -5835 300 267 125 29 chr5 91948926 91949301 -111136231 + L1MEd LINE L1 2145 2555 -3574 259 292 168 0 chr5 91949583 91949744 -111135788 + L1MEd LINE L1 2872 3059 -3070 852 201 84 48 chr5 91951278 91951740 -111133792 - MLT1E3 LTR MaLR -110 544 2 1574 322 75 72 chr5 91954503 91956356 -111129176 - ERVL LTR ERVL -543 4807 2601 606 189 124 59 chr5 91956648 91956801 -111128731 - MER21A LTR ERV1 -72 859 697 993 157 23 7 chr5 91956916 91957122 -111128410 - THE1B LTR MaLR -146 209 1 3279 126 14 8 chr5 91957122 91957624 -111127908 - THE1B-int LTR MaLR 0 1580 1076 1370 102 0 0 chr5 91957624 91957801 -111127731 - THE1B LTR MaLR -187 177 1 1139 318 66 29 chr5 91957887 91958551 -111126981 + HERV16 LTR ERVL 674 1362 -3634 1574 164 46 74 chr5 91958662 91959029 -111126503 + MER21A LTR ERV1 1 357 -574 24365 45 2 0 chr5 91959145 91962205 -111123327 - L1P LINE L1 -1995 4151 1088 4008 246 10 1 chr5 91962314 91963277 -111122255 + L1P LINE L1 3111 4082 -2064 * 5878 80 2 8 chr5 91963274 91966796 -111118736 + L1P LINE L1 5 3604 -2542 1377 216 19 32 chr5 92016804 92017119 -111068413 + MLT1A1 LTR MaLR 55 365 0 731 301 19 0 chr5 92017202 92017415 -111068117 - HAL1 LINE L1 -950 1557 1341 342 0 0 0 chr5 92017553 92017591 -111067941 + (TG)n Simple_repeat Simple_repeat 1 38 0 465 216 130 97 chr5 92017596 92017865 -111067667 - L1ME LINE L1 -5787 283 6 28 0 0 0 chr5 92018193 92018221 -111067311 + AT_rich Low_complexity Low_complexity 1 28 0 313 191 9 48 chr5 92019514 92019619 -111065913 - L1MA10 LINE L1 -8 6326 6226 338 341 51 9 chr5 92019725 92019939 -111065593 + L1M4 LINE L1 4694 4916 -1230 275 276 69 103 chr5 92020171 92020461 -111065071 - L2 LINE L2 -104 3209 2930 1114 209 126 30 chr5 92020508 92020810 -111064722 - MLT1D LTR MaLR -174 331 1 1459 244 39 62 chr5 92020823 92021340 -111064192 - MLT1D LTR MaLR 0 505 1 237 349 46 0 chr5 92021342 92021451 -111064081 - L2 LINE L2 -388 2925 2812 768 205 77 6 chr5 92021587 92021743 -111063789 + MER3 DNA MER1_type 43 209 0 305 285 24 8 chr5 92021746 92021869 -111063663 - L2 LINE L2 -1518 1796 1672 1263 201 35 28 chr5 92021869 92022150 -111063382 - MLT1E LTR MaLR 0 593 311 702 203 28 0 chr5 92022150 92022293 -111063239 + MLT2D LTR ERVL 1 147 -267 1260 174 28 5 chr5 92022293 92022511 -111063021 - MSTB LTR MaLR 0 426 204 210 383 81 0 chr5 92022532 92022767 -111062765 - L2 LINE L2 -1048 2266 2013 1914 155 3 0 chr5 92023610 92023914 -111061618 + AluSx SINE Alu 1 305 -7 2118 133 30 41 chr5 92025070 92025252 -111060280 + THE1B LTR MaLR 1 178 -186 2184 85 17 10 chr5 92025252 92025547 -111059985 + AluSg SINE Alu 3 299 -11 2118 133 30 41 chr5 92025547 92025732 -111059800 + THE1B LTR MaLR 178 364 0 326 250 10 48 chr5 92025977 92026081 -111059451 + L1MC4 LINE L1 6604 6703 -1339 * 331 261 0 22 chr5 92026052 92026144 -111059388 - L1MC4 LINE L1 -1339 6703 6614 2070 112 7 14 chr5 92026149 92026444 -111059088 - AluSx SINE Alu -19 293 1 1759 148 3 40 chr5 92027755 92028079 -111057453 - AluSx SINE Alu 0 312 1 182 61 0 30 chr5 92028478 92028511 -111057021 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 232 309 0 0 chr5 92028672 92028740 -111056792 + MIR SINE MIR 89 156 -106 26 0 0 0 chr5 92030332 92030358 -111055174 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 92030555 92030586 -111054946 + AT_rich Low_complexity Low_complexity 1 31 0 31 26 0 0 chr5 92030937 92030975 -111054557 + AT_rich Low_complexity Low_complexity 1 38 0 789 240 180 35 chr5 92032641 92033007 -111052525 - L3b LINE CR1 -8 1575 1157 29 70 0 0 chr5 92033286 92033343 -111052189 + AT_rich Low_complexity Low_complexity 1 57 0 2281 95 7 0 chr5 92035316 92035620 -111049912 + AluSq SINE Alu 1 306 -7 472 350 0 0 chr5 92035813 92035930 -111049602 - L2 LINE L2 0 3272 3156 254 309 12 0 chr5 92036119 92036203 -111049329 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 206 224 20 0 chr5 92036562 92036611 -111048921 + (TG)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr5 92038129 92038150 -111047382 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr5 92038599 92038649 -111046883 + AT_rich Low_complexity Low_complexity 1 50 0 1348 292 98 36 chr5 92039162 92039932 -111045600 - L2 LINE L2 0 3313 2490 1100 300 43 24 chr5 92039936 92040474 -111045058 - L2 LINE L2 -1227 2087 1449 21 36 0 0 chr5 92040629 92040657 -111044875 + AT_rich Low_complexity Low_complexity 1 28 0 354 23 0 0 chr5 92042714 92042757 -111042775 + (TG)n Simple_repeat Simple_repeat 1 43 0 254 357 0 0 chr5 92044072 92044156 -111041376 - MIR3 SINE MIR -43 165 82 322 217 11 11 chr5 92044751 92044843 -111040689 + L1MB8 LINE L1 -144 4294967243 -6333 806 277 88 7 chr5 92045406 92045680 -111039852 + L1MB8 LINE L1 631 926 -5358 271 300 0 0 chr5 92045692 92045782 -111039750 - L1MC4 LINE L1 -1339 6703 6614 1396 276 51 26 chr5 92045806 92046280 -111039252 + L1MB8 LINE L1 937 1398 -5165 2158 121 3 13 chr5 92046280 92046595 -111038937 + AluSx SINE Alu 1 312 0 1396 276 51 26 chr5 92046595 92047102 -111038430 + L1MB8 LINE L1 1398 2110 -4453 4529 256 22 63 chr5 92047191 92048059 -111037473 + L1MB8 LINE L1 3717 4619 -1795 236 269 0 30 chr5 92048059 92048126 -111037406 + AluSp SINE Alu 123 187 -116 * 343 142 3 33 chr5 92048112 92048183 -111037349 + AluJo/FLAM SINE Alu 69 130 -172 * 4529 256 22 63 chr5 92048126 92048185 -111037347 + L1MB8 LINE L1 4619 4679 -1735 2329 70 3 19 chr5 92048185 92048498 -111037034 + AluY SINE Alu 1 308 -3 4529 256 22 63 chr5 92048498 92048688 -111036844 + L1MB8 LINE L1 4679 4875 -1539 1932 156 0 10 chr5 92048688 92048989 -111036543 + AluJb SINE Alu 1 298 -14 4529 256 22 63 chr5 92048989 92050613 -111034919 + L1MB8 LINE L1 4875 6402 -12 2046 115 0 17 chr5 92050716 92051012 -111034520 + AluSx SINE Alu 11 301 -11 22 0 0 0 chr5 92051692 92051714 -111033818 + AT_rich Low_complexity Low_complexity 1 22 0 1305 32 0 0 chr5 92051714 92051870 -111033662 - L1PA5 LINE L1 -11 6143 5988 1681 180 10 78 chr5 92052541 92052936 -111032596 - MLT1B LTR MaLR 0 390 23 1145 167 52 42 chr5 92053245 92053533 -111031999 + MER33 DNA MER1_type 1 291 -33 219 285 24 24 chr5 92054745 92054868 -111030664 + (CTA)n Simple_repeat Simple_repeat 3 125 0 667 249 41 12 chr5 92054901 92055070 -111030462 - MIR SINE MIR -63 199 26 31 58 0 0 chr5 92055372 92055424 -111030108 + AT_rich Low_complexity Low_complexity 1 52 0 857 257 40 18 chr5 92055487 92055894 -111029638 - L1MEc LINE L1 -3681 2534 2170 2017 186 46 137 chr5 92056201 92056369 -111029163 - L1M4c LINE L1 -3228 3504 3322 1848 179 0 6 chr5 92056369 92056682 -111028850 - AluJb SINE Alu 0 312 2 2017 186 46 137 chr5 92056682 92057301 -111028231 - L1M4c LINE L1 -3410 3322 2789 1587 39 0 3 chr5 92057319 92057703 -111027829 - L1PA5 LINE L1 -2 6152 5708 1231 269 85 30 chr5 92057703 92058394 -111027138 - L1M4c LINE L1 -3939 2793 2065 * 6530 259 22 39 chr5 92058387 92060322 -111025210 - L1 LINE L1 -4794 1859 2 278 336 8 0 chr5 92060501 92060626 -111024906 - L1M4c LINE L1 -5029 1705 1541 459 286 135 0 chr5 92061240 92061425 -111024107 - MLT1L LTR MaLR -5 610 401 258 218 0 0 chr5 92062566 92062621 -111022911 - MER116 DNA Mariner -25 55 1 4857 143 76 7 chr5 92063290 92063418 -111022114 + L1PA8 LINE L1 4488 4606 -1566 2363 93 0 7 chr5 92063418 92063728 -111021804 + AluY SINE Alu 4 311 0 4857 143 76 7 chr5 92063728 92065245 -111020287 + L1PA8 LINE L1 4606 6172 0 27 49 0 0 chr5 92067473 92067514 -111018018 + AT_rich Low_complexity Low_complexity 1 41 0 409 280 134 52 chr5 92069751 92069983 -111015549 - MIR SINE MIR -6 256 6 21 0 0 0 chr5 92070518 92070539 -111014993 + AT_rich Low_complexity Low_complexity 1 21 0 2131 116 0 47 chr5 92070583 92070901 -111014631 + AluSx SINE Alu 1 303 -9 305 338 40 34 chr5 92070959 92071107 -111014425 + MIR3 SINE MIR 43 191 -17 291 157 0 0 chr5 92071335 92071386 -111014146 + (TTTA)n Simple_repeat Simple_repeat 1 51 0 646 221 87 0 chr5 92071387 92071536 -111013996 - FAM SINE Alu -23 162 1 28 29 0 0 chr5 92071896 92071931 -111013601 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 92071968 92071992 -111013540 + AT_rich Low_complexity Low_complexity 1 24 0 1914 171 0 3 chr5 92072029 92072339 -111013193 + AluJb SINE Alu 1 309 -3 7988 162 15 20 chr5 92072361 92074861 -111010671 + L1MA4 LINE L1 3809 6296 -4 26 64 0 0 chr5 92074877 92074924 -111010608 + AT_rich Low_complexity Low_complexity 1 47 0 316 218 136 36 chr5 92075021 92075131 -111010401 - AluJo SINE Alu -70 232 112 25 83 0 0 chr5 92075526 92075586 -111009946 + AT_rich Low_complexity Low_complexity 1 60 0 299 392 39 26 chr5 92076107 92076260 -111009272 - L2 LINE L2 -16 3256 3102 200 188 24 118 chr5 92076426 92076511 -111009021 - L2 LINE L2 -264 3008 2932 2475 58 0 0 chr5 92076527 92076822 -111008710 + AluY SINE Alu 1 295 -16 1677 155 0 53 chr5 92076859 92077163 -111008369 + AluJo SINE Alu 5 292 -20 1971 121 7 23 chr5 92077933 92078238 -111007294 + AluSx SINE Alu 1 300 -12 239 203 34 0 chr5 92078533 92078590 -111006942 + MER112 DNA MER1_type 9 67 -193 2463 121 19 87 chr5 92078590 92079061 -111006471 - Tigger2 DNA MER2_type 0 2718 2280 379 155 0 0 chr5 92079072 92079130 -111006402 - Tigger2 DNA MER2_type -2656 62 5 315 0 0 0 chr5 92079143 92079178 -111006354 + (TG)n Simple_repeat Simple_repeat 2 36 0 1045 156 0 17 chr5 92079413 92079592 -111005940 - FRAM SINE Alu -1 175 1 493 264 219 6 chr5 92079751 92079929 -111005603 - MIR SINE MIR -2 260 45 1560 189 81 14 chr5 92080238 92080597 -111004935 - MLT1B LTR MaLR 0 390 8 21 36 0 0 chr5 92081055 92081083 -111004449 + AT_rich Low_complexity Low_complexity 1 28 0 535 315 144 27 chr5 92081166 92081833 -111003699 - L1MEc LINE L1 -5532 864 120 213 279 10 96 chr5 92082282 92082386 -111003146 + L3 LINE CR1 552 646 -931 757 194 0 0 chr5 92084261 92084395 -111001137 + MER1B DNA MER1_type 1 134 -163 565 111 0 44 chr5 92084394 92084484 -111001048 + MER1B DNA MER1_type 244 329 0 * 25 51 0 0 chr5 92086883 92086922 -110998610 + AT_rich Low_complexity Low_complexity 1 39 0 419 300 0 0 chr5 92087409 92087519 -110998013 - L2 LINE L2 -7 3306 3197 190 162 54 0 chr5 92088110 92088147 -110997385 + L2 LINE L2 3274 3312 -1 2282 78 30 0 chr5 92088233 92088528 -110997004 + AluSg SINE Alu 1 304 -6 22 94 0 0 chr5 92089564 92089628 -110995904 + AT_rich Low_complexity Low_complexity 1 64 0 247 238 163 12 chr5 92089673 92089753 -110995779 - MIR SINE MIR -137 125 34 210 393 0 0 chr5 92090202 92090314 -110995218 - L2 LINE L2 -457 2857 2746 189 0 0 0 chr5 92090316 92090337 -110995195 + (TTGG)n Simple_repeat Simple_repeat 2 22 0 210 118 0 0 chr5 92090468 92090502 -110995030 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 167 0 0 chr5 92091055 92091091 -110994441 + T-rich Low_complexity Low_complexity 1 36 0 2341 101 0 0 chr5 92091787 92092095 -110993437 + AluSq SINE Alu 3 310 -3 22 0 0 0 chr5 92093382 92093404 -110992128 + AT_rich Low_complexity Low_complexity 1 22 0 583 267 34 6 chr5 92093828 92094004 -110991528 + MIR SINE MIR 80 260 -2 6929 62 5 2 chr5 92094258 92095177 -110990355 + L1PA7 LINE L1 5230 6150 -4 1450 206 61 13 chr5 92096457 92096851 -110988681 + Charlie1 DNA MER1_type 2343 2755 -6 330 311 0 22 chr5 92097344 92097434 -110988098 - L2 LINE L2 -36 3236 3149 511 228 11 0 chr5 92098613 92098705 -110986827 + MIR3 SINE MIR 88 180 -28 429 285 22 15 chr5 92099081 92099218 -110986314 - MIR SINE MIR -49 213 76 28 0 0 0 chr5 92099570 92099598 -110985934 + AT_rich Low_complexity Low_complexity 1 28 0 7707 20 0 0 chr5 92099823 92100969 -110984563 - L1PA2 LINE L1 0 6155 5011 23 54 0 0 chr5 92101398 92101435 -110984097 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 92101457 92101485 -110984047 + AT_rich Low_complexity Low_complexity 1 28 0 368 244 41 24 chr5 92101498 92101621 -110983911 - L1ME4a LINE L1 0 6121 5997 229 179 54 18 chr5 92101883 92101939 -110983593 - L1ME LINE L1 -538 5583 5526 24 32 0 0 chr5 92103339 92103370 -110982162 + AT_rich Low_complexity Low_complexity 1 31 0 627 270 149 40 chr5 92104366 92104714 -110980818 + MLT1J LTR MaLR 72 457 -54 197 333 104 59 chr5 92104938 92105160 -110980372 - L2 LINE L2 -530 2784 2553 322 301 0 0 chr5 92106250 92106333 -110979199 - L2 LINE L2 -28 3285 3203 591 314 70 51 chr5 92106739 92106777 -110978755 + L2 LINE L2 2393 2429 -885 3547 103 37 10 chr5 92106777 92107290 -110978242 - MER1A DNA MER1_type 0 527 1 591 314 70 51 chr5 92107290 92107623 -110977909 + L2 LINE L2 2429 2771 -543 192 77 0 0 chr5 92107747 92107773 -110977759 + (TA)n Simple_repeat Simple_repeat 2 27 0 1475 117 0 0 chr5 92107773 92107969 -110977563 - AluSg/x SINE Alu -20 292 97 229 337 62 49 chr5 92109116 92109359 -110976173 - L3 LINE CR1 -320 1257 1012 6709 73 13 5 chr5 92109398 92110903 -110974629 - L1PA8 LINE L1 -12 6160 4650 331 259 247 0 chr5 92110961 92111119 -110974413 + MIR SINE MIR 59 255 -7 872 290 158 61 chr5 92111391 92112276 -110973256 - L2 LINE L2 -3 3310 2315 2704 0 0 3 chr5 92112276 92112574 -110972958 - AluYa5 SINE Alu -14 297 1 872 290 158 61 chr5 92112574 92112738 -110972794 - L2 LINE L2 -998 2315 2168 955 193 35 52 chr5 92112998 92113286 -110972246 + Tigger5 DNA MER2_type 1 2230 -93 2236 164 5 23 chr5 92113286 92113675 -110971857 + MSTC LTR MaLR 1 382 -46 376 152 30 0 chr5 92113903 92113969 -110971563 + Tigger5 DNA MER2_type 2255 2322 -1 823 242 47 17 chr5 92114177 92114538 -110970994 + MLT1I LTR MaLR 1 406 -3 830 171 19 32 chr5 92115356 92115514 -110970018 - MSTD LTR MaLR 0 396 241 1971 113 3 50 chr5 92115683 92116001 -110969531 + AluSx SINE Alu 1 303 -9 32 0 0 0 chr5 92116002 92116034 -110969498 + AT_rich Low_complexity Low_complexity 1 32 0 253 61 20 20 chr5 92116034 92116083 -110969449 + (TATAA)n Simple_repeat Simple_repeat 1 49 0 180 0 0 0 chr5 92116318 92116338 -110969194 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 716 178 32 16 chr5 92117605 92117788 -110967744 - MLT1A1 LTR MaLR -215 150 1 213 366 21 21 chr5 92118067 92118160 -110967372 + MIR3 SINE MIR 1 93 -115 292 286 124 22 chr5 92118219 92118397 -110967135 + L2 LINE L2 2639 2834 -480 276 319 71 18 chr5 92118557 92118670 -110966862 + MER102a DNA MER1_type 176 294 -36 441 250 196 0 chr5 92119199 92119347 -110966185 + L1ME LINE L1 5596 5772 -349 2318 67 3 0 chr5 92119541 92119847 -110965685 + AluY SINE Alu 1 307 0 332 161 97 65 chr5 92119913 92120037 -110965495 + L1ME4a LINE L1 5994 6121 0 276 239 275 14 chr5 92120187 92120325 -110965207 - MIR3 SINE MIR -26 182 9 234 0 0 0 chr5 92121032 92121058 -110964474 + (A)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 92121484 92121505 -110964027 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 92121850 92121887 -110963645 + AT_rich Low_complexity Low_complexity 1 37 0 1966 144 12 3 chr5 92123426 92123745 -110961787 - MLT2C1 LTR ERVL -75 322 1 2464 224 64 18 chr5 92124699 92125463 -110960069 - L1MCb LINE L1 -2923 3641 2843 4241 212 52 18 chr5 92125477 92127200 -110958332 - L1MCb LINE L1 -4740 1824 40 34 89 0 0 chr5 92127345 92127435 -110958097 + AT_rich Low_complexity Low_complexity 1 90 0 328 317 72 24 chr5 92128166 92128333 -110957199 + MIR3 SINE MIR 30 204 -4 189 107 0 0 chr5 92128846 92128874 -110956658 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 223 143 20 20 chr5 92128877 92128926 -110956606 + (TA)n Simple_repeat Simple_repeat 2 50 0 315 0 0 0 chr5 92128931 92128966 -110956566 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 70 0 0 chr5 92129996 92130039 -110955493 + AT_rich Low_complexity Low_complexity 1 43 0 222 191 0 0 chr5 92130394 92130441 -110955091 + T-rich Low_complexity Low_complexity 3 49 0 236 270 68 88 chr5 92130614 92130762 -110954770 + L2 LINE L2 3169 3313 0 398 264 108 0 chr5 92132060 92132189 -110953343 + MER103 DNA DNA 17 159 -7 391 331 105 17 chr5 92132371 92132667 -110952865 - L2 LINE L2 -99 3214 2893 237 196 0 0 chr5 92132680 92132731 -110952801 + (CA)n Simple_repeat Simple_repeat 2 52 0 691 298 25 13 chr5 92132746 92132981 -110952551 - L2 LINE L2 -481 2833 2596 28 0 0 0 chr5 92133551 92133579 -110951953 + AT_rich Low_complexity Low_complexity 1 28 0 505 299 142 19 chr5 92133607 92133875 -110951657 + L1M4 LINE L1 3119 3419 -2727 285 319 25 6 chr5 92134013 92134173 -110951359 + L1M4 LINE L1 3657 3819 -2327 22 35 0 0 chr5 92134594 92134623 -110950909 + AT_rich Low_complexity Low_complexity 1 29 0 334 308 0 0 chr5 92135035 92135126 -110950406 - MIR SINE MIR -105 157 67 301 283 137 54 chr5 92135134 92135339 -110950193 - L1MEd LINE L1 -3358 2771 2550 518 265 51 28 chr5 92135413 92135666 -110949866 - L1MEd LINE L1 -3712 2417 2159 783 296 73 38 chr5 92136040 92137053 -110948479 - L1MEd LINE L1 -4653 1657 561 282 29 0 0 chr5 92137520 92137555 -110947977 + (TG)n Simple_repeat Simple_repeat 2 36 0 6960 48 9 1 chr5 92137559 92138966 -110946566 - L1PA7 LINE L1 0 6154 4740 4384 119 34 0 chr5 92138968 92139624 -110945908 - L1P3 LINE L1 -5776 685 8 597 257 27 0 chr5 92139729 92139877 -110945655 - MIR SINE MIR 0 262 111 2367 92 0 0 chr5 92139908 92140211 -110945321 + AluSx SINE Alu 1 303 -9 1111 112 37 0 chr5 92141154 92141315 -110944217 - AluSg/x SINE Alu -9 303 137 925 157 84 0 chr5 92142078 92142256 -110943276 - L1MC2 LINE L1 -12 6332 6140 287 230 143 32 chr5 92142349 92142475 -110943057 + MER103 DNA DNA 8 147 -19 186 191 0 0 chr5 92143187 92143229 -110942303 + (CATA)n Simple_repeat Simple_repeat 3 44 0 212 113 75 38 chr5 92143833 92143886 -110941646 + (CAGAA)n Simple_repeat Simple_repeat 5 59 0 2231 90 40 0 chr5 92145975 92146274 -110939258 + AluY SINE Alu 1 311 0 225 0 0 0 chr5 92146274 92146299 -110939233 + (TA)n Simple_repeat Simple_repeat 1 25 0 2437 36 26 10 chr5 92146457 92146759 -110938773 + AluY SINE Alu 1 307 -4 196 241 56 0 chr5 92146995 92147049 -110938483 - L2 LINE L2 -73 3240 3184 21 0 0 0 chr5 92147442 92147463 -110938069 + AT_rich Low_complexity Low_complexity 1 21 0 1827 219 28 34 chr5 92147586 92148094 -110937438 + MLT1D LTR MaLR 1 505 0 1442 166 10 7 chr5 92148197 92148486 -110937046 + L1MA4 LINE L1 6007 6296 -4 546 139 82 0 chr5 92148487 92148609 -110936923 + Charlie2 DNA MER1_type 2366 2497 -365 23 48 0 48 chr5 92148815 92148878 -110936654 + AT_rich Low_complexity Low_complexity 1 60 0 231 114 0 0 chr5 92150038 92150073 -110935459 + (T)n Simple_repeat Simple_repeat 1 35 0 537 98 0 12 chr5 92150487 92150569 -110934963 + Tigger1 DNA MER2_type 1230 1310 -1108 560 293 122 14 chr5 92150569 92150863 -110934669 + L2 LINE L2 2846 3171 -142 27 0 0 0 chr5 92151004 92151031 -110934501 + AT_rich Low_complexity Low_complexity 1 27 0 11177 139 37 1 chr5 92151463 92153265 -110932267 + Tigger1 DNA MER2_type 1 1868 -550 27813 23 0 0 chr5 92153265 92157348 -110928184 + L1PA2 LINE L1 2073 6155 0 31 0 0 0 chr5 92157348 92157379 -110928153 + AT_rich Low_complexity Low_complexity 1 31 0 3142 159 19 22 chr5 92157379 92157782 -110927750 + Tigger1 DNA MER2_type 1838 2240 -178 2140 107 3 0 chr5 92157782 92158072 -110927460 - AluSg SINE Alu -5 305 15 3142 159 19 22 chr5 92158072 92158251 -110927281 + Tigger1 DNA MER2_type 2240 2418 0 317 230 108 72 chr5 92159361 92159443 -110926089 - L2 LINE L2 -21 3292 3202 1550 211 79 55 chr5 92159443 92159936 -110925596 + MLT1D LTR MaLR 1 505 0 317 230 108 72 chr5 92159936 92159992 -110925540 - L2 LINE L2 -111 3202 3149 5122 90 16 9 chr5 92162268 92163001 -110922531 - L1PA11 LINE L1 0 6174 5437 2133 157 0 3 chr5 92163002 92163379 -110922153 - L1PA11 LINE L1 -765 5381 5006 242 88 0 0 chr5 92163401 92163435 -110922097 - L1PA11 LINE L1 -2169 3977 3944 1559 191 98 11 chr5 92164035 92164412 -110921120 - L1ME1 LINE L1 0 6166 5757 701 187 66 0 chr5 92164469 92164635 -110920897 + L1MA9 LINE L1 6135 6311 -1 1125 280 107 42 chr5 92164836 92164959 -110920573 + L1ME LINE L1 4083 4197 -1949 2863 46 6 0 chr5 92164959 92165310 -110920222 - THE1A LTR MaLR -2 353 1 1125 280 107 42 chr5 92165310 92165913 -110919619 + L1ME LINE L1 4197 4759 -1387 644 203 0 43 chr5 92165913 92166051 -110919481 - FLAM_A SINE Alu -1 132 1 1125 280 107 42 chr5 92166051 92166502 -110919030 + L1ME LINE L1 4759 5403 -743 1476 236 137 26 chr5 92166503 92167049 -110918483 + L1MC4 LINE L1 7280 7886 -156 271 323 10 0 chr5 92167125 92167224 -110918308 + L1ME LINE L1 5465 5564 -600 488 252 7 29 chr5 92168377 92168516 -110917016 + L1ME4a LINE L1 5497 5632 -532 369 0 0 0 chr5 92169204 92169245 -110916287 + (CA)n Simple_repeat Simple_repeat 2 42 0 201 298 70 79 chr5 92169722 92169836 -110915696 - L2 LINE L2 -219 3053 2941 * 292 266 80 18 chr5 92169828 92169941 -110915591 + MIR SINE MIR 23 142 -66 2309 94 0 0 chr5 92170748 92171045 -110914487 - AluSg SINE Alu -13 297 1 229 268 95 65 chr5 92171459 92171795 -110913737 + L1ME4a LINE L1 5776 6121 0 26 0 0 0 chr5 92172186 92172212 -110913320 + AT_rich Low_complexity Low_complexity 1 26 0 292 333 163 0 chr5 92172540 92172675 -110912857 + L2 LINE L2 3116 3272 0 1046 246 101 37 chr5 92174264 92174764 -110910768 + MLT1G LTR MaLR 12 590 0 243 349 46 51 chr5 92174889 92175084 -110910448 - L2 LINE L2 -210 3062 2869 23 54 0 0 chr5 92175468 92175505 -110910027 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr5 92176127 92176169 -110909363 + AT_rich Low_complexity Low_complexity 1 42 0 1976 82 0 11 chr5 92176337 92176616 -110908916 + L1PA7 LINE L1 5878 6153 -1 438 185 0 49 chr5 92176673 92176754 -110908778 - MER45 DNA AcHobo -90 88 12 256 277 15 0 chr5 92176900 92176965 -110908567 + L2 LINE L2 3230 3295 -18 1620 197 40 106 chr5 92177277 92177795 -110907737 + MLT1D LTR MaLR 22 505 0 245 239 56 0 chr5 92178287 92178358 -110907174 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 224 243 29 186 chr5 92178647 92178787 -110906745 + MIR SINE MIR 3 120 -142 299 297 115 62 chr5 92180585 92180959 -110904573 + L2 LINE L2 2013 2406 -908 279 0 0 0 chr5 92181108 92181139 -110904393 + (CA)n Simple_repeat Simple_repeat 1 31 0 1289 268 105 17 chr5 92181165 92181222 -110904310 - L1ME3A LINE L1 -220 5950 5899 1501 145 3 113 chr5 92181222 92181533 -110903999 - AluJo SINE Alu -22 290 14 1289 268 105 17 chr5 92181533 92182058 -110903474 - L1ME3A LINE L1 -271 5899 5317 538 281 86 8 chr5 92182078 92182345 -110903187 - L1ME3A LINE L1 -863 5283 4996 186 103 0 0 chr5 92182928 92182957 -110902575 + (TG)n Simple_repeat Simple_repeat 2 30 0 201 250 0 36 chr5 92183157 92183213 -110902319 - L2 LINE L2 -2 3270 3217 270 287 103 0 chr5 92183245 92183332 -110902200 - MIR3 SINE MIR -24 184 89 2214 128 122 8 chr5 92184264 92184648 -110900884 - MSTA LTR MaLR 0 428 1 8237 171 88 4 chr5 92184654 92186160 -110899372 - MSTA-int LTR MaLR -6 1645 14 730 132 12 2 chr5 92186173 92186304 -110899228 - MSTA LTR MaLR -225 139 1 213 224 20 20 chr5 92186460 92186509 -110899023 - L2 LINE L2 -5 3267 3219 5935 109 32 23 chr5 92186743 92187939 -110897593 - L1PA16 LINE L1 -9 6157 4951 1550 170 189 8 chr5 92187939 92188298 -110897234 + MSTB LTR MaLR 3 426 0 5935 109 32 23 chr5 92188298 92188379 -110897153 - L1PA16 LINE L1 -1215 4951 4872 463 333 43 11 chr5 92188985 92189171 -110896361 - MIR SINE MIR -50 212 21 988 289 143 81 chr5 92190968 92192437 -110893095 + L2 LINE L2 1792 3313 0 1817 146 11 4 chr5 92192614 92192914 -110892618 - AluSx SINE Alu 0 302 1 30 45 0 0 chr5 92193064 92193108 -110892424 + AT_rich Low_complexity Low_complexity 1 44 0 235 241 0 0 chr5 92193274 92193332 -110892200 + (TA)n Simple_repeat Simple_repeat 1 58 0 193 345 0 0 chr5 92194060 92194115 -110891417 - L2 LINE L2 -5 3267 3213 355 288 72 0 chr5 92194141 92194252 -110891280 - L2 LINE L2 -4 3309 3191 22 35 0 0 chr5 92196811 92196840 -110888692 + AT_rich Low_complexity Low_complexity 1 29 0 535 245 156 86 chr5 92197500 92197884 -110887648 + MLT1H LTR MaLR 138 548 -1 273 331 86 14 chr5 92197983 92198158 -110887374 + MIR SINE MIR 11 239 -23 1539 124 21 0 chr5 92198587 92198821 -110886711 - AluSq SINE Alu 0 313 75 216 0 0 0 chr5 92199271 92199295 -110886237 + (A)n Simple_repeat Simple_repeat 1 24 0 353 267 78 100 chr5 92199907 92200087 -110885445 - L2 LINE L2 -18 3254 3079 539 156 10 0 chr5 92203218 92203314 -110882218 + MSTD LTR MaLR 289 385 -11 1146 312 107 18 chr5 92203321 92204094 -110881438 + L2 LINE L2 2460 3311 -2 210 239 22 0 chr5 92204635 92204681 -110880851 + L2 LINE L2 1881 1927 -1387 1264 112 0 22 chr5 92204690 92204869 -110880663 - AluSq SINE Alu -138 175 1 326 319 145 5 chr5 92205137 92205344 -110880188 + MIR SINE MIR 8 243 -19 4756 127 7 5 chr5 92206219 92206961 -110878571 - L1PA16 LINE L1 -2 6164 5422 433 361 53 70 chr5 92207983 92208398 -110877134 + L2 LINE L2 2811 3218 -54 365 314 62 44 chr5 92208440 92208714 -110876818 - L2 LINE L2 -1278 2036 1758 23 0 0 0 chr5 92209154 92209177 -110876355 + AT_rich Low_complexity Low_complexity 1 23 0 1045 210 65 73 chr5 92210529 92210914 -110874618 - MER113 DNA MER1_type? -54 467 86 2022 128 53 36 chr5 92211138 92211496 -110874036 + THE1B LTR MaLR 1 364 0 331 285 31 39 chr5 92214921 92215051 -110870481 + L1ME LINE L1 5476 5604 -517 825 282 68 19 chr5 92215273 92215582 -110869950 - LTR33A LTR ERVL -160 363 40 915 129 0 21 chr5 92216350 92216490 -110869042 + FLAM_C SINE Alu 1 137 -6 711 280 118 12 chr5 92216496 92216921 -110868611 + HAL1 LINE L1 993 1462 -1045 317 236 157 39 chr5 92217775 92217953 -110867579 + HAL1b LINE L1 746 944 -404 290 262 283 14 chr5 92217953 92218098 -110867434 + MER5A DNA MER1_type 4 187 -2 367 230 37 131 chr5 92218109 92218300 -110867232 + MER5B DNA MER1_type 2 174 -4 1447 271 62 38 chr5 92218740 92219239 -110866293 + MLT1J LTR MaLR 1 511 0 8224 221 42 25 chr5 92219315 92219684 -110865848 + L1MB2 LINE L1 2573 2934 -3237 2058 112 3 14 chr5 92219684 92219980 -110865552 + AluSq SINE Alu 3 295 -18 8224 221 42 25 chr5 92219980 92220517 -110865015 + L1MB2 LINE L1 2934 3461 -2710 2821 13 0 0 chr5 92220517 92220826 -110864706 + AluYa5 SINE Alu 1 309 -2 8224 221 42 25 chr5 92220826 92223399 -110862133 + L1MB2 LINE L1 3461 6167 -4 1245 32 7 0 chr5 92223448 92223602 -110861930 + L1PA4 LINE L1 5997 6151 -4 28 0 0 0 chr5 92223725 92223753 -110861779 + AT_rich Low_complexity Low_complexity 1 28 0 284 106 0 0 chr5 92225099 92225146 -110860386 - AluSc SINE Alu -1 298 252 233 197 15 0 chr5 92225249 92225315 -110860217 + GA-rich Low_complexity Low_complexity 3 69 0 22 35 0 0 chr5 92225528 92225557 -110859975 + AT_rich Low_complexity Low_complexity 1 29 0 377 189 40 0 chr5 92226630 92226704 -110858828 + L2 LINE L2 3237 3313 0 628 284 42 38 chr5 92226802 92227063 -110858469 - MIR SINE MIR 0 262 1 418 243 81 32 chr5 92227272 92227457 -110858075 + L1MD3 LINE L1 5636 5829 -1979 400 338 32 13 chr5 92227989 92228143 -110857389 + MIR SINE MIR 3 159 -103 28 61 0 0 chr5 92228371 92228420 -110857112 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr5 92228849 92228871 -110856661 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 434 369 75 14 chr5 92229351 92229465 -110856067 + L2 LINE L2 2973 3079 -193 1311 215 151 43 chr5 92229465 92229934 -110855598 - MLT2B1 LTR ERVL 0 520 1 434 369 75 14 chr5 92229934 92230098 -110855434 + L2 LINE L2 3079 3268 -4 4675 194 130 126 chr5 92230211 92231288 -110854244 + L1MD3 LINE L1 5826 6898 -1097 6052 142 67 31 chr5 92231288 92231571 -110853961 - Tigger3b DNA MER2_type -1798 1230 958 2267 101 0 3 chr5 92231571 92231868 -110853664 - AluSx SINE Alu -15 297 2 6052 142 67 31 chr5 92231868 92232772 -110852760 - Tigger3b DNA MER2_type -2070 958 1 4675 194 130 126 chr5 92232772 92232868 -110852664 + L1MD3 LINE L1 6898 6992 -1003 2290 102 3 0 chr5 92232868 92233172 -110852360 + AluSp SINE Alu 1 305 -8 4675 194 130 126 chr5 92233172 92233490 -110852042 + L1MD3 LINE L1 6992 7307 -688 540 151 179 9 chr5 92233490 92233596 -110851936 + MLT1F1 LTR MaLR 2 125 -442 4675 194 130 126 chr5 92233596 92234149 -110851383 + L1MD3 LINE L1 7307 7984 -11 656 326 69 45 chr5 92234164 92234276 -110851256 - LTR67 LTR ERVL -75 482 374 1706 160 57 24 chr5 92234276 92234607 -110850925 + MER2 DNA MER2_type 1 342 -2 656 326 69 45 chr5 92234607 92234957 -110850575 - LTR67 LTR ERVL -183 374 9 189 171 0 0 chr5 92235208 92235243 -110850289 + A-rich Low_complexity Low_complexity 1 35 0 7583 26 1 0 chr5 92235371 92236939 -110848593 + L1PA4 LINE L1 4584 6152 -3 592 296 82 0 chr5 92237905 92238111 -110847421 - MIR SINE MIR -3 259 37 461 321 206 4 chr5 92238452 92238695 -110846837 - MLT1J2 LTR MaLR -44 406 115 34 0 0 0 chr5 92239166 92239200 -110846332 + AT_rich Low_complexity Low_complexity 1 34 0 703 217 124 12 chr5 92239503 92239664 -110845868 + MIR SINE MIR 16 194 -68 245 184 0 20 chr5 92239654 92239703 -110845829 - MIR SINE MIR -67 195 148 * 272 297 0 14 chr5 92239704 92239778 -110845754 + MIR SINE MIR 189 261 -1 1226 208 24 48 chr5 92239995 92240317 -110845215 + AluJo SINE Alu 1 315 0 250 208 21 0 chr5 92240332 92240380 -110845152 - L2 LINE L2 -4 3309 3261 546 255 51 41 chr5 92240382 92240578 -110844954 + MIR SINE MIR 65 262 0 23 0 0 0 chr5 92240673 92240696 -110844836 + AT_rich Low_complexity Low_complexity 1 23 0 294 266 46 69 chr5 92240744 92240917 -110844615 - MER112 DNA MER1_type -86 174 6 518 254 127 52 chr5 92242089 92242302 -110843230 + MIR SINE MIR 19 247 -15 431 346 22 27 chr5 92242553 92242738 -110842794 + MIR SINE MIR 64 247 -15 652 274 19 24 chr5 92243690 92243902 -110841630 - MIR SINE MIR 0 262 52 6847 140 45 2 chr5 92244031 92245211 -110840321 - Tigger3b DNA MER2_type 0 1231 1 272 282 24 24 chr5 92245886 92246010 -110839522 + MLT1L LTR MaLR 474 597 -18 23783 132 24 16 chr5 92246036 92250897 -110834635 + L1PA10 LINE L1 1287 6164 -4 221 222 0 0 chr5 92252678 92252723 -110832809 - MIR SINE MIR -121 141 97 383 164 14 27 chr5 92252745 92252818 -110832714 + MER58C DNA MER1_type 1 72 -143 317 293 0 0 chr5 92252848 92252930 -110832602 - L1MC4 LINE L1 -1347 7089 7008 314 245 0 82 chr5 92252854 92252952 -110832580 + L1MC4 LINE L1 6614 6703 -1339 * 548 230 0 0 chr5 92252983 92253083 -110832449 + MER58C DNA MER1_type 116 215 0 1168 259 47 45 chr5 92253086 92253468 -110832064 - MLT1I LTR MaLR -14 395 13 379 125 0 0 chr5 92253639 92253695 -110831837 + THE1C LTR MaLR 1 56 -372 1097 104 52 36 chr5 92253700 92253893 -110831639 + THE1C LTR MaLR 180 375 0 350 239 32 7 chr5 92253908 92254063 -110831469 + (TA)n Simple_repeat Simple_repeat 1 159 0 23 54 0 0 chr5 92254458 92254495 -110831037 + AT_rich Low_complexity Low_complexity 1 37 0 241 308 0 15 chr5 92254683 92254748 -110830784 - MIR3 SINE MIR -18 190 127 195 303 13 53 chr5 92257849 92257925 -110827607 - L2 LINE L2 0 3313 3241 690 325 60 74 chr5 92257935 92258446 -110827086 + L2 LINE L2 2474 2991 -281 1979 126 75 29 chr5 92258446 92258794 -110826738 + THE1B LTR MaLR 1 364 0 690 325 60 74 chr5 92258794 92258887 -110826645 + L2 LINE L2 2991 3084 -188 2075 160 119 13 chr5 92258887 92259274 -110826258 + MSTA LTR MaLR 1 428 0 690 325 60 74 chr5 92259274 92259480 -110826052 + L2 LINE L2 3084 3272 0 771 152 64 0 chr5 92260381 92260506 -110825026 + FLAM_C SINE Alu 1 133 0 372 321 43 50 chr5 92260798 92261100 -110824432 + L1MCc LINE L1 153 452 -5971 657 312 41 15 chr5 92261452 92261795 -110823737 + L1MCc LINE L1 1129 1480 -4943 613 286 181 22 chr5 92261816 92262441 -110823091 - L1ME3A LINE L1 -281 6283 5613 930 284 71 14 chr5 92262448 92262871 -110822661 - L1ME3A LINE L1 -4484 2237 1791 368 259 54 0 chr5 92262860 92262972 -110822560 - L1ME3A LINE L1 -4670 1870 1753 * 243 289 13 0 chr5 92263002 92263078 -110822454 - L1ME3A LINE L1 -4982 1548 1472 648 287 150 10 chr5 92263103 92263403 -110822129 - L1ME3A LINE L1 -6031 690 349 2184 123 3 0 chr5 92264212 92264512 -110821020 + AluSx SINE Alu 1 301 -11 2237 108 0 0 chr5 92264753 92265048 -110820484 - AluSg SINE Alu -15 295 1 1718 194 7 0 chr5 92265959 92266269 -110819263 - AluJo SINE Alu 0 312 1 243 366 23 42 chr5 92267153 92267329 -110818203 + MIR3 SINE MIR 29 201 -7 297 0 0 0 chr5 92268739 92268772 -110816760 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1216 227 107 39 chr5 92269528 92269959 -110815573 + MLT1C LTR MaLR 8 467 0 1206 191 31 99 chr5 92269964 92270356 -110815176 - MLT1A1 LTR MaLR 0 365 1 2370 85 3 0 chr5 92270613 92270907 -110814625 + AluSp SINE Alu 1 295 -18 200 211 0 70 chr5 92271316 92271373 -110814159 + L2 LINE L2 3261 3313 0 2078 113 0 48 chr5 92271394 92271705 -110813827 - AluSq SINE Alu -17 296 1 889 234 68 56 chr5 92271844 92272165 -110813367 - MER102b DNA MER1_type -15 326 2 326 292 26 26 chr5 92272452 92272565 -110812967 + MIR SINE MIR 94 206 -56 261 83 0 0 chr5 92272988 92273024 -110812508 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 202 278 19 0 chr5 92273031 92273085 -110812447 - L2 LINE L2 -20 3252 3198 27 62 0 0 chr5 92274128 92274176 -110811356 + AT_rich Low_complexity Low_complexity 1 48 0 2346 82 3 3 chr5 92274273 92274576 -110810956 - AluY SINE Alu -4 307 5 4538 83 25 42 chr5 92274788 92275463 -110810069 + SVA Other Other 723 1386 0 2182 128 0 0 chr5 92275747 92276052 -110809480 - AluSx SINE Alu -7 305 1 207 0 0 0 chr5 92276719 92276742 -110808790 + (CA)n Simple_repeat Simple_repeat 2 24 0 268 246 35 9 chr5 92277036 92277150 -110808382 + (TA)n Simple_repeat Simple_repeat 1 117 0 343 292 6 56 chr5 92277150 92277328 -110808204 + L1ME4a LINE L1 5897 6065 -56 652 196 27 14 chr5 92277606 92277753 -110807779 - MER63A DNA MER1_type 0 210 62 563 186 0 0 chr5 92277753 92277850 -110807682 - Tigger7 DNA MER2_type -1 2490 2394 1292 197 48 0 chr5 92277853 92278102 -110807430 - Tigger7 DNA MER2_type -2224 263 3 1517 199 6 50 chr5 92279124 92279445 -110806087 - AluJo SINE Alu -5 307 1 700 266 0 19 chr5 92280237 92280444 -110805088 + L1MEc LINE L1 45 247 -6149 1962 223 86 19 chr5 92280447 92281067 -110804465 + L1ME1 LINE L1 5489 6149 -17 2098 105 3 18 chr5 92281089 92281375 -110804157 + AluSq SINE Alu 11 292 -21 524 200 7 0 chr5 92281380 92281525 -110804007 + (TA)n Simple_repeat Simple_repeat 1 146 0 731 101 8 39 chr5 92281525 92281654 -110803878 - L1MB3 LINE L1 -3 6180 6056 659 246 9 88 chr5 92281826 92282054 -110803478 - MIR SINE MIR -13 249 40 249 281 52 21 chr5 92282196 92282292 -110803240 - L2 LINE L2 0 3313 3215 192 277 326 7 chr5 92284139 92284280 -110801252 + MIR SINE MIR 75 260 -2 227 213 0 0 chr5 92284285 92284332 -110801200 + (TTA)n Simple_repeat Simple_repeat 3 49 0 1786 181 19 8 chr5 92286021 92286547 -110798985 - L1M4 LINE L1 -562 5616 5086 411 299 7 71 chr5 92286846 92287000 -110798532 - MER91A DNA MER1_type -52 144 1 1830 195 59 102 chr5 92287539 92288075 -110797457 + MLT2B3 LTR ERVL 1 512 -42 261 0 0 0 chr5 92288075 92288104 -110797428 + (TG)n Simple_repeat Simple_repeat 2 30 0 1830 195 59 102 chr5 92288104 92288146 -110797386 + MLT2B3 LTR ERVL 512 554 0 258 268 68 22 chr5 92289078 92289246 -110796286 + L1M3c LINE L1 818 1131 -5967 1314 309 28 11 chr5 92290003 92290569 -110794963 + L1M3c LINE L1 1614 2189 -4979 207 103 0 26 chr5 92290628 92290667 -110794865 + (TGAA)n Simple_repeat Simple_repeat 4 41 0 1394 139 127 28 chr5 92290670 92291010 -110794522 - Tigger3(Golem) DNA MER2_type -13 3016 1 2511 253 75 32 chr5 92291010 92292673 -110792859 + L1MA9 LINE L1 2284 4043 -3522 * 2751 220 27 16 chr5 92292667 92292887 -110792645 + L1MA9 LINE L1 5513 5729 -1836 2352 115 0 0 chr5 92292887 92293192 -110792340 + AluSx SINE Alu 1 305 -7 2751 220 27 16 chr5 92293192 92293702 -110791830 + L1MA9 LINE L1 5729 6251 -1314 2711 157 25 73 chr5 92293694 92294380 -110791152 + L1MA9 LINE L1 7075 7727 -4 * 278 26 26 0 chr5 92294725 92294764 -110790768 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 40592 32 23 2 chr5 92294771 92300789 -110784743 - L1PA2 LINE L1 0 6155 7 293 296 68 25 chr5 92301822 92301984 -110783548 + MER102a DNA MER1_type 152 320 -10 387 0 0 0 chr5 92302093 92302136 -110783396 + (TC)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr5 92302135 92302166 -110783366 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 1088 262 73 12 chr5 92302712 92303056 -110782476 + LTR16C LTR ERVL 127 491 0 22 35 0 0 chr5 92303215 92303244 -110782288 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 92303777 92303799 -110781733 + AT_rich Low_complexity Low_complexity 1 22 0 211 317 99 20 chr5 92303877 92303978 -110781554 + L2 LINE L2 3197 3305 -8 23 33 0 0 chr5 92304961 92304991 -110780541 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 92305281 92305303 -110780229 + AT_rich Low_complexity Low_complexity 1 22 0 268 236 45 67 chr5 92306675 92306764 -110778768 + MIR SINE MIR 62 148 -114 197 252 90 49 chr5 92306912 92306994 -110778538 + MIR3 SINE MIR 70 154 -54 205 182 0 23 chr5 92308626 92308670 -110776862 + CT-rich Low_complexity Low_complexity 2 44 0 215 254 14 14 chr5 92310428 92310499 -110775033 + CT-rich Low_complexity Low_complexity 2 72 0 285 266 28 37 chr5 92311160 92311269 -110774263 + GA-rich Low_complexity Low_complexity 2 109 0 216 0 0 0 chr5 92311821 92311845 -110773687 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 215 146 24 0 chr5 92313641 92313682 -110771850 + (TG)n Simple_repeat Simple_repeat 2 43 0 27 73 0 0 chr5 92313921 92313976 -110771556 + AT_rich Low_complexity Low_complexity 1 55 0 904 274 27 102 chr5 92314741 92314915 -110770617 + L1MC4a LINE L1 5312 5498 -676 2101 116 27 13 chr5 92314915 92315216 -110770316 - AluSq SINE Alu -7 306 2 904 274 27 102 chr5 92315216 92315709 -110769823 + L1MC4a LINE L1 5498 5931 -243 420 263 203 32 chr5 92315717 92315998 -110769534 - L2 LINE L2 0 3313 2985 542 301 47 12 chr5 92316860 92317116 -110768416 - MER102a DNA MER1_type 0 330 66 211 345 0 17 chr5 92317630 92317688 -110767844 - L2 LINE L2 -95 3177 3121 304 365 61 17 chr5 92317915 92318096 -110767436 - MIR SINE MIR -56 206 18 644 62 146 0 chr5 92318212 92318308 -110767224 - AluY SINE Alu -8 303 194 329 257 9 9 chr5 92318977 92319082 -110766450 - MLT1L LTR MaLR -5 610 506 599 297 57 34 chr5 92319166 92319520 -110766012 - MLT1L LTR MaLR -225 390 29 260 286 122 41 chr5 92319687 92319785 -110765747 - MIR SINE MIR -84 124 19 21 0 0 0 chr5 92321077 92321098 -110764434 + AT_rich Low_complexity Low_complexity 1 21 0 334 167 24 0 chr5 92321263 92321347 -110764185 + (TCCA)n Simple_repeat Simple_repeat 1 86 0 742 146 0 30 chr5 92321374 92321538 -110763994 + (TCCA)n Simple_repeat Simple_repeat 4 162 0 574 316 197 30 chr5 92321553 92321989 -110763543 - L2 LINE L2 0 3313 2805 342 260 201 24 chr5 92321995 92322164 -110763368 - MIR SINE MIR 0 262 64 521 244 190 24 chr5 92322358 92322563 -110762969 - MIR SINE MIR -21 241 3 1002 108 0 0 chr5 92322609 92322739 -110762793 + AluSp/q SINE Alu 171 300 -13 754 280 53 38 chr5 92322740 92323058 -110762474 - L2 LINE L2 -534 2780 2458 1448 144 3 109 chr5 92323139 92323452 -110762080 + AluJo SINE Alu 5 284 -28 189 0 0 0 chr5 92323459 92323480 -110762052 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 225 227 15 45 chr5 92323602 92323668 -110761864 + L2 LINE L2 3209 3272 0 1316 180 6 93 chr5 92325198 92325509 -110760023 + AluJb SINE Alu 5 288 -24 452 250 0 0 chr5 92325673 92325765 -110759767 + MIR3 SINE MIR 117 208 0 220 296 127 0 chr5 92328871 92328942 -110756590 + L2 LINE L2 3234 3313 0 265 330 0 10 chr5 92331059 92331162 -110754370 - MIR SINE MIR -63 199 98 440 256 19 44 chr5 92331406 92331566 -110753966 - MIR SINE MIR -46 216 61 6817 140 45 2 chr5 92331708 92332889 -110752643 - Tigger3b DNA MER2_type 0 1231 1 272 282 24 24 chr5 92333564 92333688 -110751844 + MLT1L LTR MaLR 474 597 -18 31891 48 1 1 chr5 92333714 92338584 -110746948 + L1PA2 LINE L1 1287 6155 0 278 26 26 0 chr5 92338591 92338630 -110746902 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 2900 159 25 72 chr5 92338975 92339660 -110745872 - L1MA9 LINE L1 -4 7727 7075 2779 223 29 19 chr5 92339652 92340163 -110745369 - L1MA9 LINE L1 -1314 6251 5729 * 2331 114 0 0 chr5 92340163 92340469 -110745063 - AluSx SINE Alu -6 306 1 2779 223 29 19 chr5 92340469 92340689 -110744843 - L1MA9 LINE L1 -1836 5729 5513 1582 231 72 50 chr5 92340683 92341751 -110743781 - L1MA9 LINE L1 -3522 4043 2929 * 203 125 25 0 chr5 92342129 92342169 -110743363 + GA-rich Low_complexity Low_complexity 1 41 0 2226 101 10 0 chr5 92343298 92343595 -110741937 - AluSx SINE Alu -12 300 1 2740 77 3 0 chr5 92343694 92344046 -110741486 - THE1A LTR MaLR 0 355 3 11637 91 4 1 chr5 92344048 92345623 -110739909 - THE1A-int LTR MaLR 0 1580 1 2688 84 3 3 chr5 92345623 92345978 -110739554 - THE1A LTR MaLR 0 355 1 871 212 0 22 chr5 92347781 92347960 -110737572 + FAM SINE Alu 1 175 0 496 53 26 13 chr5 92347965 92348041 -110737491 + (GAAA)n Simple_repeat Simple_repeat 4 80 0 232 204 20 0 chr5 92348892 92348941 -110736591 - L2 LINE L2 -3 3310 3261 1918 84 16 0 chr5 92349772 92350021 -110735511 + AluSg SINE Alu 27 279 -31 837 97 0 0 chr5 92350053 92350166 -110735366 - AluSg/x SINE Alu -11 301 189 304 332 19 68 chr5 92350196 92350401 -110735131 - MER91A DNA MER1_type -1 195 1 25 0 0 0 chr5 92350480 92350505 -110735027 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 92352972 92353001 -110732531 + AT_rich Low_complexity Low_complexity 1 29 0 264 59 0 0 chr5 92353335 92353369 -110732163 + (TG)n Simple_repeat Simple_repeat 2 35 0 2036 111 6 41 chr5 92353369 92353676 -110731856 - AluSq SINE Alu -15 298 1 321 353 157 10 chr5 92354276 92354582 -110730950 - L3b LINE CR1 -131 1452 1102 2357 63 0 30 chr5 92354868 92355037 -110730495 + AluY SINE Alu 1 159 -152 309 68 0 0 chr5 92355037 92355081 -110730451 + (CCCTAA)n Simple_repeat Simple_repeat 1 44 0 2357 63 0 30 chr5 92355081 92355212 -110730320 + AluY SINE Alu 159 292 -19 189 254 90 15 chr5 92356171 92356238 -110729294 + MIR3 SINE MIR 6 77 -131 25 51 0 0 chr5 92357132 92357171 -110728361 + AT_rich Low_complexity Low_complexity 1 39 0 549 55 0 0 chr5 92363413 92363486 -110722046 + (CCTA)n Simple_repeat Simple_repeat 2 74 0 2288 89 0 0 chr5 92364848 92365140 -110720392 - AluSg SINE Alu -18 292 1 414 134 0 0 chr5 92367892 92367959 -110717573 + (CA)n Simple_repeat Simple_repeat 2 68 0 248 325 13 0 chr5 92368178 92368255 -110717277 - MER2 DNA MER2_type 0 345 268 861 141 61 94 chr5 92368314 92368527 -110717005 - MER2 DNA MER2_type -138 207 2 217 323 21 0 chr5 92368529 92368622 -110716910 + MIR SINE MIR 72 166 -96 206 268 0 0 chr5 92368718 92368759 -110716773 + L2 LINE L2 3210 3250 -22 696 236 47 0 chr5 92371645 92371793 -110713739 + FRAM SINE Alu 1 154 -22 484 236 187 6 chr5 92371956 92372138 -110713394 + L1MA9 LINE L1 6056 6270 -42 232 300 17 0 chr5 92372554 92372614 -110712918 + L2 LINE L2 3210 3270 -2 21 0 0 0 chr5 92374547 92374568 -110710964 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 92375690 92375719 -110709813 + AT_rich Low_complexity Low_complexity 1 29 0 180 77 0 0 chr5 92376234 92376260 -110709272 + (GAA)n Simple_repeat Simple_repeat 1 26 0 392 311 8 8 chr5 92382071 92382190 -110703342 - MIR SINE MIR -142 120 2 23 54 0 0 chr5 92383917 92383954 -110701578 + AT_rich Low_complexity Low_complexity 1 37 0 1487 150 55 12 chr5 92385560 92385813 -110699719 + AluJo SINE Alu 7 270 -42 577 220 104 17 chr5 92386324 92386497 -110699035 - MER5A DNA MER1_type -1 188 1 215 300 95 26 chr5 92386506 92386696 -110698836 - L2 LINE L2 -556 2758 2556 771 176 10 36 chr5 92386796 92386989 -110698543 + MER53 DNA DNA 1 188 -1 343 221 69 69 chr5 92388285 92388416 -110697116 - L2 LINE L2 -8 3305 3175 348 304 18 27 chr5 92388501 92388613 -110696919 - MIR SINE MIR -80 128 18 2419 91 0 0 chr5 92389690 92389998 -110695534 + AluSq SINE Alu 1 308 -5 2112 125 3 3 chr5 92390318 92390630 -110694902 + AluSx SINE Alu 1 312 0 210 37 0 0 chr5 92391727 92391754 -110693778 + (CA)n Simple_repeat Simple_repeat 2 28 0 27 49 0 0 chr5 92391787 92391828 -110693704 + AT_rich Low_complexity Low_complexity 1 41 0 242 273 109 0 chr5 92392680 92392790 -110692742 + MER113 DNA MER1_type? 399 520 -1 298 194 42 14 chr5 92392851 92392923 -110692609 + MER116 DNA Mariner 2 75 -5 680 208 0 0 chr5 92393265 92393390 -110692142 - FLAM_C SINE Alu -8 125 1 225 207 121 95 chr5 92394195 92394311 -110691221 - MIR SINE MIR -69 139 21 373 256 138 31 chr5 92394793 92394953 -110690579 + MER5B DNA MER1_type 2 178 0 541 309 64 20 chr5 92395209 92395418 -110690114 - MIR SINE MIR -29 233 18 308 329 118 60 chr5 92398424 92398911 -110686621 + L2 LINE L2 2717 3272 0 31 0 0 0 chr5 92403259 92403290 -110682242 + AT_rich Low_complexity Low_complexity 1 31 0 321 100 0 0 chr5 92404460 92404510 -110681022 + (TG)n Simple_repeat Simple_repeat 1 50 0 2122 106 20 13 chr5 92405036 92405338 -110680194 - AluSq SINE Alu -9 304 1 2156 96 3 10 chr5 92406374 92406677 -110678855 - AluSg SINE Alu -8 302 2 641 284 102 46 chr5 92407819 92408389 -110677143 - L1ME4a LINE L1 -11 6110 5509 672 273 19 14 chr5 92408479 92408688 -110676844 - L2 LINE L2 -10 3303 3094 21 0 0 0 chr5 92409898 92409919 -110675613 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 92411933 92411971 -110673561 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2222 99 3 0 chr5 92411981 92412265 -110673267 - AluSc SINE Alu -24 285 1 447 300 40 40 chr5 92412301 92412501 -110673031 + Charlie8 DNA MER1_type 75 274 -2143 6010 134 84 58 chr5 92412527 92413728 -110671804 - Ricksha_b DNA DNA -13 1241 9 971 210 9 31 chr5 92414613 92414837 -110670695 - MER20 DNA MER1_type 0 219 1 2024 253 63 24 chr5 92415339 92416192 -110669340 - L1ME3 LINE L1 -211 5951 5023 2935 111 74 10 chr5 92416192 92416680 -110668852 + LTR44 LTR ERV1 1 519 0 2024 253 63 24 chr5 92416680 92416981 -110668551 - L1ME3 LINE L1 -1139 5023 4735 2458 116 39 0 chr5 92417177 92417558 -110667974 + L1PA13 LINE L1 5767 6162 -1 21 82 0 0 chr5 92418017 92418066 -110667466 + AT_rich Low_complexity Low_complexity 1 49 0 243 0 0 0 chr5 92418296 92418323 -110667209 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2240 102 0 3 chr5 92418325 92418620 -110666912 - AluSc SINE Alu -15 294 1 325 295 201 7 chr5 92421600 92421749 -110663783 - MIR SINE MIR -25 237 60 374 289 70 0 chr5 92421862 92421976 -110663556 - L2 LINE L2 -1 3312 3191 2300 234 93 9 chr5 92423287 92424207 -110661325 - Charlie2 DNA MER1_type 0 2862 1865 250 233 78 147 chr5 92424211 92424340 -110661192 - Charlie2 DNA MER1_type -2473 309 190 731 229 46 11 chr5 92424349 92424524 -110661008 + MER5A DNA MER1_type 4 184 -5 381 252 163 0 chr5 92424531 92424666 -110660866 - Charlie2 DNA MER1_type -2581 201 45 468 307 16 16 chr5 92425181 92425308 -110660224 - L2 LINE L2 -5 3267 3141 189 349 56 24 chr5 92425656 92425782 -110659750 + L2 LINE L2 2618 2747 -567 453 295 112 19 chr5 92426082 92426528 -110659004 + LTR33 LTR ERVL 18 519 -2 576 291 8 8 chr5 92428971 92429105 -110656427 + L2 LINE L2 3137 3270 -2 444 306 22 8 chr5 92429131 92429265 -110656267 - MIR SINE MIR -101 161 26 2333 98 0 3 chr5 92429349 92429656 -110655876 + AluSc SINE Alu 1 306 -3 183 162 0 0 chr5 92430460 92430497 -110655035 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 2218 110 3 0 chr5 92431210 92431502 -110654030 + AluSx SINE Alu 1 293 -19 371 172 0 0 chr5 92432276 92432340 -110653192 + MER5B DNA MER1_type 115 178 0 643 224 147 0 chr5 92432349 92432505 -110653027 - MER5A DNA MER1_type -1 188 10 641 268 36 0 chr5 92432522 92432690 -110652842 - MER5A DNA MER1_type 0 189 16 221 271 21 0 chr5 92432846 92432894 -110652638 - L2 LINE L2 -504 2810 2762 244 183 70 70 chr5 92433075 92433146 -110652386 - MIR SINE MIR -86 176 106 24 32 0 0 chr5 92433786 92433817 -110651715 + AT_rich Low_complexity Low_complexity 1 31 0 419 169 18 32 chr5 92433901 92434193 -110651339 + (TTATA)n Simple_repeat Simple_repeat 1 287 0 1126 271 258 33 chr5 92434750 92435585 -110649947 + L2 LINE L2 1962 3056 -257 2066 126 7 29 chr5 92435585 92435894 -110649638 - AluSx SINE Alu -10 302 1 1126 271 258 33 chr5 92435894 92435954 -110649578 + L2 LINE L2 3056 3101 -212 302 235 15 0 chr5 92435949 92436017 -110649515 + L2 LINE L2 3245 3313 0 * 682 301 83 62 chr5 92436154 92436589 -110648943 - L2 LINE L2 -1 3312 2869 662 300 49 5 chr5 92436614 92436837 -110648695 + MIR SINE MIR 1 233 -29 1473 142 112 0 chr5 92436837 92437097 -110648435 - MLT1A1 LTR MaLR 0 365 77 25 0 0 0 chr5 92437457 92437482 -110648050 + AT_rich Low_complexity Low_complexity 1 25 0 604 214 41 0 chr5 92438483 92438628 -110646904 + L1MEc LINE L1 45 195 -6201 184 293 0 85 chr5 92438723 92438805 -110646727 + MIR3 SINE MIR 5 79 -129 513 323 32 48 chr5 92438930 92439178 -110646354 - L1MEd LINE L1 -4934 1136 893 200 407 12 0 chr5 92439269 92439355 -110646177 + MIR SINE MIR 157 243 -19 2091 110 3 7 chr5 92439364 92439665 -110645867 - AluSx SINE Alu -12 300 1 305 226 52 26 chr5 92439939 92440054 -110645478 - L1MEd LINE L1 -5170 900 783 225 0 0 0 chr5 92440075 92440100 -110645432 + (TC)n Simple_repeat Simple_repeat 2 26 0 1368 278 63 67 chr5 92440901 92441563 -110643969 + L2 LINE L2 1820 2479 -835 21 0 0 0 chr5 92441861 92441882 -110643650 + AT_rich Low_complexity Low_complexity 1 21 0 1301 81 152 0 chr5 92442188 92442386 -110643146 + MER30 DNA MER1_type 3 230 0 290 243 43 0 chr5 92442453 92442523 -110643009 + MIR SINE MIR 71 143 -65 472 247 170 41 chr5 92442576 92442770 -110642762 - MIR SINE MIR -32 230 12 376 89 0 0 chr5 92442828 92442884 -110642648 + MLT2B2 LTR ERVL 2 57 -458 767 226 63 106 chr5 92442885 92443252 -110642280 - MLT1A1 LTR MaLR -12 353 3 1363 198 133 24 chr5 92443254 92443593 -110641939 + MLT2B1 LTR ERVL 47 422 -98 432 0 0 0 chr5 92443598 92443646 -110641886 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 2041 125 0 0 chr5 92443706 92443986 -110641546 - AluSx SINE Alu -32 280 1 250 261 166 13 chr5 92444677 92444834 -110640698 - MIR3 SINE MIR -6 202 22 1485 221 55 11 chr5 92444908 92445342 -110640190 + MLT1C LTR MaLR 15 467 0 2245 108 3 0 chr5 92445453 92445749 -110639783 + AluSg SINE Alu 1 297 -13 421 269 38 44 chr5 92446373 92446533 -110638999 + MIR SINE MIR 49 207 -55 1418 182 93 4 chr5 92446557 92446826 -110638706 + AluJb SINE Alu 11 303 -9 22 0 0 0 chr5 92447198 92447220 -110638312 + AT_rich Low_complexity Low_complexity 1 22 0 488 110 28 9 chr5 92447566 92447675 -110637857 + (TA)n Simple_repeat Simple_repeat 2 112 0 22 0 0 0 chr5 92448083 92448105 -110637427 + AT_rich Low_complexity Low_complexity 1 22 0 2298 113 0 0 chr5 92448685 92448995 -110636537 + AluSx SINE Alu 1 310 -2 2855 3 0 0 chr5 92449292 92449600 -110635932 - AluYa5 SINE Alu -3 308 1 654 271 51 19 chr5 92449769 92449983 -110635549 + LTR16A LTR ERVL 69 289 -161 1948 194 22 0 chr5 92449985 92450340 -110635192 + MLT1A1 LTR MaLR 1 363 -2 7528 215 32 29 chr5 92450348 92452070 -110633462 + MLT1A1-int LTR MaLR 7 1735 0 1622 186 33 36 chr5 92452076 92452436 -110633096 + MLT1A1 LTR MaLR 7 365 0 378 264 139 0 chr5 92452451 92452580 -110632952 + LTR16A LTR ERVL 301 447 -3 795 180 10 88 chr5 92452882 92453076 -110632456 + MER97a DNA MER1_type? 1 179 -715 1469 148 46 33 chr5 92453520 92453576 -110631956 + MER34C LTR ERV1 1 55 -530 1857 193 64 25 chr5 92453576 92454016 -110631516 - LOR1b LTR ERV1 -2 459 3 1469 148 46 33 chr5 92454016 92454263 -110631269 + MER34C LTR ERV1 55 308 -277 230 304 20 39 chr5 92454263 92454365 -110631167 + MER91 DNA MER1_type 40 139 -57 474 320 20 30 chr5 92454776 92454973 -110630559 + MIR SINE MIR 56 250 -12 220 369 43 78 chr5 92456193 92456475 -110629057 - L2 LINE L2 -48 3224 2953 1811 156 67 25 chr5 92456489 92456849 -110628683 + THE1C LTR MaLR 1 375 0 236 100 25 0 chr5 92456996 92457036 -110628496 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 92459301 92459330 -110626202 + AT_rich Low_complexity Low_complexity 1 29 0 895 152 0 67 chr5 92460020 92460184 -110625348 + FRAM SINE Alu 1 153 -13 24 0 0 0 chr5 92460196 92460220 -110625312 + AT_rich Low_complexity Low_complexity 1 24 0 354 274 105 0 chr5 92461338 92461462 -110624070 + MER39 LTR ERV1 1 137 -570 * 1200 179 34 30 chr5 92461459 92461801 -110623731 + MER39 LTR ERV1 307 707 0 2429 124 2 80 chr5 92461916 92462119 -110623413 + L1MB3 LINE L1 5428 5645 -538 2090 101 0 0 chr5 92462119 92462386 -110623146 + AluSq SINE Alu 29 295 -18 2429 124 2 80 chr5 92462386 92462683 -110622849 + L1MB3 LINE L1 5645 5889 -294 687 215 9 80 chr5 92462683 92462980 -110622552 + MSTD LTR MaLR 1 265 -100 778 309 37 18 chr5 92462987 92463369 -110622163 + HERV16 LTR ERVL 139 527 -4469 1121 312 28 15 chr5 92463431 92463892 -110621640 + HERV16 LTR ERVL 746 1212 -3784 1030 316 93 17 chr5 92463932 92464588 -110620944 + HERV16 LTR ERVL 2334 3039 -2615 582 279 70 10 chr5 92464619 92464820 -110620712 + HERV16 LTR ERVL 3325 3537 -2117 346 349 48 20 chr5 92464882 92465134 -110620398 + HERV16 LTR ERVL 3662 3920 -1844 849 285 117 20 chr5 92465190 92465541 -110619991 + HERV16 LTR ERVL 3984 4368 -1286 182 291 116 23 chr5 92466331 92466417 -110619115 + L2 LINE L2 3212 3305 -8 3535 111 25 22 chr5 92468216 92468766 -110616766 + MER41A LTR ERV1 3 554 0 213 159 0 0 chr5 92469477 92469521 -110616011 + (ATG)n Simple_repeat Simple_repeat 2 45 0 286 278 10 41 chr5 92469545 92469642 -110615890 - MIR SINE MIR -15 247 154 2128 58 4 0 chr5 92470234 92470508 -110615024 + AluY SINE Alu 1 275 -36 1032 32 0 0 chr5 92470509 92470633 -110614899 + (GAAA)n Simple_repeat Simple_repeat 2 125 0 2021 133 0 3 chr5 92470854 92471179 -110614353 - AluSx SINE Alu 0 324 1 264 59 0 0 chr5 92471232 92471266 -110614266 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2832 46 3 0 chr5 92471266 92471612 -110613920 - L1PA7 LINE L1 -16 6138 5792 2009 150 81 4 chr5 92471896 92472485 -110613047 + MER39 LTR ERV1 11 707 0 24 67 0 0 chr5 92473654 92473699 -110611833 + AT_rich Low_complexity Low_complexity 1 45 0 294 222 16 0 chr5 92473879 92473942 -110611590 - MIR SINE MIR 0 262 199 545 321 53 19 chr5 92473948 92474157 -110611375 + MIR SINE MIR 3 218 -44 426 295 57 75 chr5 92474162 92474389 -110611143 - MIR SINE MIR -39 223 1 208 128 43 21 chr5 92474620 92474667 -110610865 + CT-rich Low_complexity Low_complexity 1 48 0 520 213 77 65 chr5 92475187 92475342 -110610190 + MER5B DNA MER1_type 1 157 -21 30 0 0 0 chr5 92480318 92480348 -110605184 + AT_rich Low_complexity Low_complexity 1 30 0 952 198 8 67 chr5 92481849 92482071 -110603461 + MER58A DNA MER1_type 1 210 -2210 1691 138 3 93 chr5 92482071 92482405 -110603127 + AluSx SINE Alu 1 304 -8 952 198 8 67 chr5 92482405 92482420 -110603112 + MER58A DNA MER1_type 210 224 0 829 203 7 0 chr5 92482486 92482624 -110602908 + MER45A DNA AcHobo 1 139 -39 829 152 0 0 chr5 92482649 92482781 -110602751 - FLAM_C SINE Alu -1 132 1 279 208 0 0 chr5 92482781 92482829 -110602703 + MER45A DNA AcHobo 131 178 0 1447 105 16 85 chr5 92484373 92484620 -110600912 - MER30 DNA MER1_type 0 230 1 333 0 0 0 chr5 92487424 92487461 -110598071 + (TA)n Simple_repeat Simple_repeat 2 38 0 525 249 33 17 chr5 92488069 92488250 -110597282 + L1MC5 LINE L1 7726 7909 -52 194 309 32 75 chr5 92488572 92488666 -110596866 + MIR SINE MIR 16 105 -157 2107 67 0 0 chr5 92489016 92489271 -110596261 - AluY SINE Alu -2 309 55 231 143 0 0 chr5 92489392 92489448 -110596084 - MER113 DNA MER1_type? -298 223 168 268 253 44 33 chr5 92489595 92489686 -110595846 - MIR SINE MIR -97 111 20 511 330 98 5 chr5 92493147 92493371 -110592161 + MIR SINE MIR 3 247 -15 252 0 0 0 chr5 92493909 92493937 -110591595 + (TG)n Simple_repeat Simple_repeat 2 29 0 2241 126 0 0 chr5 92494437 92494746 -110590786 + AluSx SINE Alu 1 309 -3 2251 90 0 7 chr5 92495478 92495779 -110589753 - AluSq SINE Alu -3 310 12 24 0 0 0 chr5 92496188 92496212 -110589320 + AT_rich Low_complexity Low_complexity 1 24 0 705 97 90 15 chr5 92496305 92496439 -110589093 - L1MB4 LINE L1 -6 6174 6031 2424 88 0 0 chr5 92497384 92497680 -110587852 + AluSx SINE Alu 1 296 -16 538 250 43 7 chr5 92499175 92499315 -110586217 + MIR SINE MIR 99 243 -19 244 239 46 18 chr5 92499559 92499668 -110585864 + (TCTA)n Simple_repeat Simple_repeat 4 115 0 2523 55 3 0 chr5 92499829 92500136 -110585396 - AluY SINE Alu -3 308 1 307 317 67 10 chr5 92500303 92500409 -110585123 + MIR SINE MIR 16 124 -84 1295 111 0 0 chr5 92500424 92500596 -110584936 - AluSq SINE Alu -141 172 1 424 315 43 31 chr5 92501529 92501783 -110583749 - Charlie8 DNA MER1_type -2160 257 1 1178 337 80 28 chr5 92501785 92502707 -110582825 + L2 LINE L2 2094 3061 -252 2025 145 0 0 chr5 92502780 92503070 -110582462 - AluSx SINE Alu -17 295 6 23 33 0 0 chr5 92503074 92503104 -110582428 + AT_rich Low_complexity Low_complexity 1 30 0 301 278 82 31 chr5 92505422 92505519 -110580013 + L2 LINE L2 3134 3235 -37 553 275 129 53 chr5 92506472 92506828 -110578704 - L2 LINE L2 -4 3309 2927 330 311 25 25 chr5 92506796 92506918 -110578614 + MIR3 SINE MIR 86 207 -1 * 231 305 24 37 chr5 92506947 92507029 -110578503 - L2 LINE L2 -3 3310 3230 345 217 14 0 chr5 92507088 92507157 -110578375 - L2 LINE L2 0 3313 3244 1986 143 13 0 chr5 92507613 92507914 -110577618 + AluSx SINE Alu 1 305 -7 613 235 38 9 chr5 92508168 92508341 -110577191 - MIR SINE MIR -36 226 53 216 0 0 0 chr5 92509082 92509106 -110576426 + (TG)n Simple_repeat Simple_repeat 1 24 0 2224 87 0 0 chr5 92509106 92509381 -110576151 - AluSg SINE Alu -33 277 3 186 43 0 0 chr5 92509381 92509404 -110576128 + (TTTC)n Simple_repeat Simple_repeat 3 25 0 338 340 160 5 chr5 92514123 92514311 -110571221 - MIR SINE MIR -1 261 45 306 241 0 0 chr5 92514537 92514645 -110570887 + (CA)n Simple_repeat Simple_repeat 1 108 0 258 309 145 7 chr5 92515571 92515723 -110569809 - MIR SINE MIR -79 183 11 205 313 0 0 chr5 92516061 92516109 -110569423 + MIR SINE MIR 117 164 -98 676 165 44 51 chr5 92516308 92516466 -110569066 + MER5A DNA MER1_type 33 189 0 270 0 0 0 chr5 92516611 92516641 -110568891 + (TG)n Simple_repeat Simple_repeat 2 31 0 260 345 29 58 chr5 92518128 92518299 -110567233 + MIR3 SINE MIR 42 207 -1 27 62 0 0 chr5 92519860 92519908 -110565624 + AT_rich Low_complexity Low_complexity 1 48 0 1060 192 15 0 chr5 92519911 92520114 -110565418 - AluJb SINE Alu -20 292 87 28 0 0 0 chr5 92520851 92520879 -110564653 + AT_rich Low_complexity Low_complexity 1 28 0 245 316 139 37 chr5 92522875 92523119 -110562413 - L2 LINE L2 -192 3080 2812 250 222 167 0 chr5 92523610 92523664 -110561868 + L2 LINE L2 3188 3250 -63 259 287 287 0 chr5 92523682 92523790 -110561742 + MER91C DNA MER1_type 1 139 -1 267 31 0 0 chr5 92527062 92527094 -110558438 + (T)n Simple_repeat Simple_repeat 1 32 0 1825 118 42 0 chr5 92528326 92528615 -110556917 + AluSq SINE Alu 1 301 -12 1689 151 0 44 chr5 92528622 92528940 -110556592 + AluJo SINE Alu 1 304 -8 2502 39 3 7 chr5 92528942 92529252 -110556280 + AluY SINE Alu 1 309 -2 1113 205 54 20 chr5 92529252 92529550 -110555982 + L1MB2 LINE L1 5828 6135 -36 4632 252 53 46 chr5 92530666 92531204 -110554328 + L1MEc LINE L1 304 836 -5560 213 39 0 0 chr5 92531204 92531230 -110554302 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4632 252 53 46 chr5 92531230 92532378 -110553154 + L1MEc LINE L1 836 2013 -4383 1908 165 34 3 chr5 92532378 92532706 -110552826 - MER44D DNA MER2_type -1 608 1 4632 252 53 46 chr5 92532706 92533168 -110552364 + L1MEc LINE L1 2013 2470 -3926 4550 201 72 123 chr5 92533277 92534755 -110550777 + L1M4 LINE L1 2315 3620 -2526 2227 87 0 3 chr5 92534755 92535043 -110550489 - AluSx SINE Alu -25 287 1 4550 201 72 123 chr5 92535043 92536003 -110549529 + L1M4 LINE L1 3620 4628 -1518 896 87 29 12 chr5 92536113 92536286 -110549246 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 283 183 17 46 chr5 92536286 92536461 -110549071 + (GACTG)n Simple_repeat Simple_repeat 4 173 0 * 1095 143 4 11 chr5 92536457 92536721 -110548811 + (TGGA)n Simple_repeat Simple_repeat 1 263 0 193 268 0 18 chr5 92537166 92537222 -110548310 + L2 LINE L2 2992 3046 -226 1883 149 0 34 chr5 92537642 92537963 -110547569 + AluSx SINE Alu 1 310 -2 2246 101 3 3 chr5 92537973 92538281 -110547251 + AluSx SINE Alu 1 308 -4 2094 75 0 28 chr5 92538281 92538599 -110546933 + AluY SINE Alu 1 309 -2 14212 116 14 11 chr5 92539259 92541553 -110543979 + L1P LINE L1 2300 4601 -1545 9186 64 1 0 chr5 92541664 92543670 -110541862 + L1PA7 LINE L1 4146 6151 -3 21 100 0 0 chr5 92543747 92543817 -110541715 + AT_rich Low_complexity Low_complexity 1 70 0 354 337 37 27 chr5 92545992 92546179 -110539353 + MER5A DNA MER1_type 1 189 0 471 244 67 8 chr5 92546532 92546651 -110538881 + MER63 DNA MER1_type 2 753 -309 226 297 27 14 chr5 92546651 92546725 -110538807 + MER63 DNA MER1_type 978 1052 -8 1043 233 122 47 chr5 92547617 92547978 -110537554 + MLT1B LTR MaLR 3 390 0 611 319 35 31 chr5 92548064 92548321 -110537211 - MIR SINE MIR 0 262 5 1156 203 67 87 chr5 92548432 92548836 -110536696 - MSTD LTR MaLR 0 396 1 2307 238 103 9 chr5 92548847 92549410 -110536122 - MSTD-int LTR MaLR -13 1722 1107 2651 184 4 10 chr5 92549444 92549951 -110535581 + MER41B LTR ERV1 130 474 -12 1031 198 19 47 chr5 92550236 92550733 -110534799 + LTR38-int LTR ERV1 594 1143 -5533 703 200 16 0 chr5 92550778 92550903 -110534629 + LTR38-int LTR ERV1 1302 1428 -5248 1382 176 55 19 chr5 92550904 92551211 -110534321 + LTR38-int LTR ERV1 1220 1537 -249 1344 141 124 20 chr5 92551198 92551552 -110533980 + LTR38-int LTR ERV1 1647 2037 -6083 * 1756 96 12 4 chr5 92551660 92551911 -110533621 + AluY SINE Alu 59 311 0 191 378 24 0 chr5 92551952 92552034 -110533498 - L3 LINE CR1 -73 1504 1421 826 226 108 0 chr5 92552049 92552235 -110533297 + MER20 DNA MER1_type 14 219 0 516 260 0 0 chr5 92552336 92552440 -110533092 + MLT1K LTR MaLR 125 228 -360 1941 110 14 14 chr5 92552481 92552814 -110532718 + AluSx SINE Alu 1 312 0 600 233 9 0 chr5 92552921 92553037 -110532495 + FLAM_C SINE Alu 2 118 -25 2282 60 0 3 chr5 92553050 92553359 -110532173 - AluY SINE Alu 0 308 1 828 191 0 7 chr5 92553384 92553531 -110532001 + FRAM SINE Alu 1 138 -38 369 0 0 0 chr5 92553539 92553580 -110531952 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 337 183 5 215 chr5 92553580 92553677 -110531855 + MLT1K LTR MaLR 330 371 -217 1850 160 0 6 chr5 92553677 92553990 -110531542 + AluSx SINE Alu 1 311 -1 337 183 5 215 chr5 92553990 92554078 -110531454 + MLT1K LTR MaLR 371 476 -112 407 68 0 17 chr5 92554078 92554137 -110531395 + Alu SINE Alu 240 297 -15 434 156 0 26 chr5 92554201 92554278 -110531254 + U3 snRNA snRNA 1 75 -142 24 0 0 0 chr5 92554278 92554302 -110531230 + AT_rich Low_complexity Low_complexity 1 24 0 207 100 0 0 chr5 92554347 92554377 -110531155 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1670 175 0 0 chr5 92554386 92554654 -110530878 - AluJb SINE Alu -44 268 1 32 26 0 0 chr5 92554654 92554693 -110530839 + AT_rich Low_complexity Low_complexity 1 39 0 890 83 16 0 chr5 92554697 92554818 -110530714 - FRAM SINE Alu -32 144 22 562 285 82 37 chr5 92554918 92555188 -110530344 - L2 LINE L2 0 3313 3032 2216 110 3 3 chr5 92555195 92555505 -110530027 + AluSx SINE Alu 1 310 -2 2138 118 0 3 chr5 92555529 92555834 -110529698 + AluSx SINE Alu 7 310 -2 196 118 20 20 chr5 92557552 92557603 -110527929 + A-rich Low_complexity Low_complexity 6 56 0 1167 198 8 17 chr5 92557765 92558003 -110527529 + ERVL LTR ERVL 2436 2671 -3093 604 239 54 70 chr5 92558008 92558287 -110527245 - MLT1B LTR MaLR -2 388 102 210 37 0 0 chr5 92558287 92558314 -110527218 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2039 96 10 7 chr5 92558316 92558607 -110526925 - AluSq SINE Alu -21 292 1 1088 135 4 4 chr5 92558607 92558841 -110526691 + (TCCA)n Simple_repeat Simple_repeat 1 234 0 830 265 125 50 chr5 92558855 92559232 -110526300 - L2 LINE L2 -40 3273 2869 969 139 12 18 chr5 92559357 92559523 -110526009 - AluSg/x SINE Alu -16 294 130 1906 113 0 4 chr5 92559523 92559789 -110525743 - AluSx SINE Alu -45 267 3 350 239 229 18 chr5 92560029 92560138 -110525394 + MIR SINE MIR 29 160 -102 811 151 75 0 chr5 92560144 92560290 -110525242 + AluJb SINE Alu 137 293 -19 861 147 14 0 chr5 92560475 92560618 -110524914 - FRAM SINE Alu -30 146 2 1960 132 3 10 chr5 92560622 92560933 -110524599 - AluJo SINE Alu -3 309 1 231 309 67 20 chr5 92560943 92561092 -110524440 - L1MC4a LINE L1 -1862 5946 5791 831 147 0 0 chr5 92561159 92561295 -110524237 + FLAM_C SINE Alu 1 136 -7 316 119 0 0 chr5 92561311 92561353 -110524179 + Alu SINE Alu 1 42 -260 2331 49 0 3 chr5 92561410 92561741 -110523791 + AluY SINE Alu 1 330 0 547 253 55 7 chr5 92561772 92561918 -110523614 + MIR SINE MIR 80 232 -30 1173 168 16 0 chr5 92561920 92562110 -110523422 - Tigger3(Golem) DNA MER2_type -1 3028 2836 2216 96 6 13 chr5 92562141 92562453 -110523079 - AluSx SINE Alu 0 312 3 1650 149 35 14 chr5 92562491 92562780 -110522752 - AluJb SINE Alu -13 299 5 657 269 18 73 chr5 92562852 92563191 -110522341 - L1MC4a LINE L1 -840 5519 5298 1949 121 0 0 chr5 92563191 92563471 -110522061 - AluSx SINE Alu -14 298 19 657 269 18 73 chr5 92563471 92563503 -110522029 - L1MC4a LINE L1 -1061 5298 5266 239 350 0 68 chr5 92563508 92563611 -110521921 + MIR SINE MIR 51 146 -116 1872 122 7 0 chr5 92563631 92563950 -110521582 + AluSx SINE Alu 1 321 0 299 349 24 16 chr5 92563956 92564082 -110521450 + MIR SINE MIR 136 262 0 790 234 105 112 chr5 92564128 92564179 -110521353 - MLT1J2 LTR MaLR 0 450 400 1698 156 3 17 chr5 92564179 92564481 -110521051 + AluJo SINE Alu 2 299 -13 2136 120 3 0 chr5 92564481 92564789 -110520743 + AluSg SINE Alu 1 309 -1 790 234 105 112 chr5 92564789 92565051 -110520481 - MLT1J2 LTR MaLR -49 401 137 1946 91 50 27 chr5 92565051 92565348 -110520184 - AluSp SINE Alu -9 304 1 790 234 105 112 chr5 92565348 92565459 -110520073 - MLT1J2 LTR MaLR -313 137 27 1908 135 0 10 chr5 92565552 92565841 -110519691 + AluJo SINE Alu 1 286 -26 188 156 22 0 chr5 92566046 92566073 -110519459 + (CATTC)n Simple_repeat Simple_repeat 5 35 -15 2278 93 0 0 chr5 92566073 92566373 -110519159 - AluSx SINE Alu -12 300 1 188 156 22 0 chr5 92566373 92566390 -110519142 + (CATTC)n Simple_repeat Simple_repeat 35 50 0 541 278 115 9 chr5 92566463 92566740 -110518792 + L2 LINE L2 2720 3017 -296 845 178 7 7 chr5 92566758 92566910 -110518622 - AluJo/FRAM SINE Alu -10 292 141 2097 103 13 0 chr5 92566910 92567210 -110518322 - AluSp SINE Alu -9 304 1 1801 92 60 35 chr5 92567514 92567797 -110517735 + AluSx SINE Alu 1 290 -22 1167 166 0 34 chr5 92568033 92568268 -110517264 + AluJo SINE Alu 86 312 0 2009 109 13 3 chr5 92569096 92569400 -110516132 + AluSx SINE Alu 1 307 -5 1991 113 20 13 chr5 92570098 92570398 -110515134 - AluSx SINE Alu -10 302 1 202 188 0 0 chr5 92570454 92570486 -110515046 - L2 LINE L2 -19 3294 3263 791 137 8 0 chr5 92570565 92570689 -110514843 - AluJo SINE Alu -178 134 10 203 299 46 23 chr5 92570709 92570796 -110514736 - MIR SINE MIR -142 120 32 774 147 0 0 chr5 92573924 92574070 -110511462 - FLAM_C SINE Alu 0 147 2 24 0 0 0 chr5 92574155 92574179 -110511353 + AT_rich Low_complexity Low_complexity 1 24 0 1725 162 28 0 chr5 92574183 92574467 -110511065 + AluJo SINE Alu 5 296 -16 273 204 51 19 chr5 92574493 92574650 -110510882 + (TA)n Simple_repeat Simple_repeat 2 163 0 732 130 65 8 chr5 92574821 92574944 -110510588 - L1PA8A LINE L1 0 6131 6002 312 259 105 43 chr5 92575075 92575237 -110510295 + L2 LINE L2 2733 2904 -410 2018 78 22 0 chr5 92575259 92575530 -110510002 - AluSc SINE Alu -15 294 18 1094 149 0 17 chr5 92575685 92575866 -110509666 - AluJb SINE Alu 0 312 135 333 283 123 0 chr5 92575905 92576043 -110509489 + L2 LINE L2 2919 3073 -240 2137 108 7 0 chr5 92576049 92576354 -110509178 + AluSp SINE Alu 5 311 -2 190 0 32 32 chr5 92576404 92576435 -110509097 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1123 119 42 0 chr5 92576464 92576516 -110509016 - AluSx SINE Alu -133 179 131 210 37 0 0 chr5 92576516 92576543 -110508989 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 1123 119 42 0 chr5 92576543 92576658 -110508874 - AluSx SINE Alu -181 131 5 2194 92 0 29 chr5 92576669 92576985 -110508547 - AluSx SINE Alu -5 307 1 234 225 99 63 chr5 92577032 92577174 -110508358 + L2 LINE L2 3160 3306 -7 383 302 82 42 chr5 92577190 92577500 -110508032 - L2 LINE L2 -205 3108 2781 2198 92 3 0 chr5 92577500 92577795 -110507737 - AluSx SINE Alu -16 296 1 333 325 0 38 chr5 92577809 92577966 -110507566 - MIR SINE MIR -74 188 38 666 199 94 73 chr5 92578145 92578336 -110507196 + MER20 DNA MER1_type 1 195 -24 2227 84 10 17 chr5 92578340 92578475 -110507057 + AluSx SINE Alu 1 135 -177 2457 82 0 9 chr5 92578475 92578790 -110506742 + AluSx SINE Alu 1 312 0 2227 84 10 17 chr5 92578790 92578951 -110506581 + AluSx SINE Alu 135 295 -17 821 276 143 13 chr5 92579514 92579891 -110505641 + MLT1J2 LTR MaLR 25 450 0 2171 130 0 3 chr5 92580052 92580359 -110505173 + AluSx SINE Alu 5 310 -2 680 250 27 104 chr5 92580473 92580563 -110504969 - MIR SINE MIR -21 241 146 2252 112 0 3 chr5 92580563 92580867 -110504665 - AluSq SINE Alu -10 303 1 680 250 27 104 chr5 92580867 92580885 -110504647 - MIR SINE MIR -116 146 128 1803 155 3 41 chr5 92580885 92581201 -110504331 - AluJb SINE Alu -8 304 1 680 250 27 104 chr5 92581201 92581351 -110504181 - MIR SINE MIR -134 128 2 2091 126 7 0 chr5 92581434 92581746 -110503786 - AluSx SINE Alu 0 314 1 217 86 0 29 chr5 92582182 92582217 -110503315 + MIR SINE MIR 117 150 -112 2314 99 0 35 chr5 92582288 92582600 -110502932 - AluSx SINE Alu -5 307 7 999 153 29 24 chr5 92582606 92582776 -110502756 - FAM SINE Alu -2 173 3 516 276 91 27 chr5 92582860 92583081 -110502451 - L2 LINE L2 -4 3309 3075 1139 162 0 63 chr5 92583096 92583255 -110502277 - AluJo SINE Alu -20 292 149 2115 133 0 10 chr5 92583255 92583563 -110501969 - AluSx SINE Alu -7 305 1 1139 162 0 63 chr5 92583563 92583625 -110501907 - AluJo SINE Alu -163 149 85 2344 108 0 0 chr5 92583848 92584153 -110501379 + AluSx SINE Alu 1 305 -7 540 327 51 67 chr5 92584986 92585543 -110499989 - L2 LINE L2 -21 3251 2685 1589 170 18 21 chr5 92586723 92587006 -110498526 - AluJo SINE Alu -30 282 1 691 229 45 67 chr5 92587038 92587092 -110498440 - MIR SINE MIR -6 256 202 1689 94 111 4 chr5 92587092 92587359 -110498173 - AluSq SINE Alu 0 308 16 691 229 45 67 chr5 92587359 92587526 -110498006 - MIR SINE MIR -60 202 39 268 221 42 30 chr5 92587606 92587717 -110497815 - MIR SINE MIR -60 148 35 1504 90 15 0 chr5 92587881 92588082 -110497450 + AluSx SINE Alu 30 233 -79 984 140 0 0 chr5 92588082 92588225 -110497307 + AluSp SINE Alu 134 276 -37 2025 114 41 3 chr5 92588445 92588735 -110496797 + AluSx SINE Alu 1 301 -11 355 297 17 0 chr5 92588735 92588853 -110496679 - L2 LINE L2 -687 2627 2508 299 229 73 31 chr5 92588859 92588955 -110496577 - L2 LINE L2 0 3313 3214 1510 197 0 0 chr5 92588982 92589246 -110496286 + AluSx SINE Alu 4 267 -45 1982 120 37 3 chr5 92589255 92589554 -110495978 + AluSx SINE Alu 3 311 -1 2359 95 10 0 chr5 92589554 92589857 -110495675 + AluSp SINE Alu 1 307 -6 2281 77 40 3 chr5 92589857 92590154 -110495378 + AluY SINE Alu 1 309 -2 528 94 0 31 chr5 92590157 92590253 -110495279 + (GGAA)n Simple_repeat Simple_repeat 4 96 0 811 245 94 17 chr5 92590328 92590839 -110494693 - L2 LINE L2 -224 3089 2526 352 276 57 83 chr5 92591690 92591882 -110493650 - MIR SINE MIR -46 216 30 21 71 0 0 chr5 92592048 92592090 -110493442 + AT_rich Low_complexity Low_complexity 1 42 0 2160 98 0 7 chr5 92592985 92593270 -110492262 + AluSc SINE Alu 17 299 -10 190 250 100 0 chr5 92594230 92594290 -110491242 + L3 LINE CR1 772 837 -740 733 289 60 46 chr5 92594305 92594589 -110490943 + L3 LINE CR1 1273 1560 -17 1887 94 49 4 chr5 92594712 92594978 -110490554 + AluSx SINE Alu 1 278 -34 279 0 0 0 chr5 92594984 92595015 -110490517 + (CA)n Simple_repeat Simple_repeat 2 32 0 285 277 107 59 chr5 92595743 92595798 -110489734 - L1MDa LINE L1 -4779 1761 1710 1571 178 104 0 chr5 92595798 92596068 -110489464 - AluSx SINE Alu -14 298 1 285 277 107 59 chr5 92596068 92596489 -110489043 - L1MDa LINE L1 -4830 1710 1262 674 115 115 0 chr5 92596504 92596600 -110488932 + U6 snRNA snRNA 1 107 0 18126 181 15 27 chr5 92596600 92598164 -110487368 + L1PA14 LINE L1 2775 4355 -3244 2268 119 10 0 chr5 92598164 92598474 -110487058 + AluSq SINE Alu 1 313 0 18126 181 15 27 chr5 92598474 92601778 -110483754 + L1PA14 LINE L1 4355 7598 -1 1772 122 94 11 chr5 92601925 92602211 -110483321 - AluSg SINE Alu 0 310 1 30 0 0 0 chr5 92602522 92602552 -110482980 + AT_rich Low_complexity Low_complexity 1 30 0 732 149 0 0 chr5 92602557 92602671 -110482861 - L1PA16 LINE L1 -9 6157 6044 450 329 189 42 chr5 92602720 92603725 -110481807 - L2 LINE L2 -497 2817 1635 2038 145 0 0 chr5 92603725 92604029 -110481503 + AluSx SINE Alu 1 304 -8 450 329 189 42 chr5 92604029 92604122 -110481410 - L2 LINE L2 -1679 1635 1557 201 385 12 35 chr5 92604317 92604486 -110481046 - L2 LINE L2 -2024 1290 1126 22 0 0 0 chr5 92604702 92604724 -110480808 + AT_rich Low_complexity Low_complexity 1 22 0 356 291 9 0 chr5 92604732 92604842 -110480690 - MER94 DNA DNA -17 117 7 244 327 39 19 chr5 92604868 92604972 -110480560 - L2 LINE L2 -928 2386 2281 454 173 185 19 chr5 92605750 92605912 -110479620 + MER53 DNA DNA 1 189 0 222 253 53 13 chr5 92606339 92606414 -110479118 - L2 LINE L2 -5 3267 3190 375 279 143 53 chr5 92606513 92606871 -110478661 + L2 LINE L2 2128 2517 -797 195 176 0 0 chr5 92608545 92608579 -110476953 + L2 LINE L2 3137 3170 -102 339 190 0 0 chr5 92609049 92609107 -110476425 + L2 LINE L2 3215 3272 0 2348 110 0 0 chr5 92609803 92610104 -110475428 + AluSx SINE Alu 1 301 -11 186 360 0 0 chr5 92611332 92611382 -110474150 + L2 LINE L2 3244 3293 -20 249 98 0 0 chr5 92613955 92613996 -110471536 + (TG)n Simple_repeat Simple_repeat 1 41 0 408 20 0 0 chr5 92614794 92614843 -110470689 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 297 189 47 chr5 92615252 92615660 -110469872 - L1M2 LINE L1 -5472 1377 912 2192 145 90 0 chr5 92617105 92617471 -110468061 + MER57A LTR ERV1 1 399 -4 21 36 0 0 chr5 92617566 92617594 -110467938 + AT_rich Low_complexity Low_complexity 1 28 0 204 241 24 24 chr5 92617664 92617747 -110467785 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 409 147 40 0 chr5 92617837 92617912 -110467620 + MER116 DNA Mariner 1 78 -2 21 0 0 0 chr5 92619073 92619094 -110466438 + AT_rich Low_complexity Low_complexity 1 21 0 437 227 8 34 chr5 92619130 92619249 -110466283 + L2 LINE L2 3189 3304 -9 213 231 58 0 chr5 92619288 92619340 -110466192 - MIR SINE MIR -169 93 39 2323 89 3 0 chr5 92619388 92619681 -110465851 - AluSc SINE Alu -14 295 2 1426 111 0 55 chr5 92619873 92620090 -110465442 - L1PA8A LINE L1 -4 6127 5923 7174 70 11 2 chr5 92620383 92621456 -110464076 + L1PA7 LINE L1 5097 6177 0 2021 91 65 0 chr5 92622133 92622435 -110463097 - AluSg SINE Alu 0 319 1 752 215 0 0 chr5 92622846 92622995 -110462537 - L1MA8 LINE L1 -19 6272 6124 2138 117 0 25 chr5 92623037 92623354 -110462178 + AluSg SINE Alu 1 309 -1 186 361 134 0 chr5 92623475 92623572 -110461960 + L2 LINE L2 3151 3260 -12 261 83 0 0 chr5 92624767 92624803 -110460729 + (T)n Simple_repeat Simple_repeat 1 36 0 1816 159 20 0 chr5 92625251 92625553 -110459979 + AluSx SINE Alu 2 309 -3 367 83 0 0 chr5 92625605 92625653 -110459879 + THE1B LTR MaLR 123 170 -194 5357 75 1 19 chr5 92625659 92626348 -110459184 - L1PA8A LINE L1 -1 6130 5454 7843 113 11 4 chr5 92626349 92627475 -110458057 - L1P3 LINE L1 -4740 1135 2 1611 96 0 0 chr5 92627476 92627685 -110457847 + THE1B LTR MaLR 156 364 0 10922 107 34 38 chr5 92627685 92629271 -110456261 + THE1B-int LTR MaLR 1 1580 0 2516 133 23 0 chr5 92629271 92629625 -110455907 + THE1B LTR MaLR 1 362 -2 243 0 0 0 chr5 92630072 92630099 -110455433 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 315 0 0 0 chr5 92630098 92630133 -110455399 + (GA)n Simple_repeat Simple_repeat 2 36 0 244 94 38 0 chr5 92630135 92630188 -110455344 + (TA)n Simple_repeat Simple_repeat 2 56 0 5438 33 3 0 chr5 92630190 92630834 -110454698 - L1PA5 LINE L1 -16 6138 5493 22 0 0 0 chr5 92632436 92632458 -110453074 + AT_rich Low_complexity Low_complexity 1 22 0 2265 125 0 0 chr5 92632889 92633192 -110452340 + AluSg SINE Alu 1 303 -7 2166 140 3 0 chr5 92633266 92633574 -110451958 - AluSx SINE Alu -3 309 1 1497 119 0 9 chr5 92634240 92634483 -110451049 - AluY SINE Alu 0 311 80 673 164 8 15 chr5 92635141 92635275 -110450257 - L1MA9 LINE L1 -171 6141 6009 443 319 83 26 chr5 92635362 92635591 -110449941 + MIR SINE MIR 21 262 0 379 360 201 22 chr5 92636163 92636858 -110448674 + L2 LINE L2 1839 2658 -656 884 239 27 22 chr5 92636892 92637114 -110448418 - MIR SINE MIR -21 241 19 2222 108 3 0 chr5 92637117 92637412 -110448120 - AluSg SINE Alu -12 298 3 549 154 0 39 chr5 92637767 92637871 -110447661 + MLT1E3 LTR MaLR 1 100 -524 1254 209 45 57 chr5 92637931 92638266 -110447266 + MLT1E3 LTR MaLR 98 428 -196 3273 239 47 24 chr5 92638271 92639411 -110446121 - L1MEc LINE L1 -1907 4737 3571 2538 245 67 50 chr5 92640070 92640102 -110445430 - L1MEc LINE L1 -3057 3587 3557 1639 81 47 4 chr5 92640102 92640366 -110445166 - AluY SINE Alu 0 313 40 2538 245 67 50 chr5 92640366 92641756 -110443776 - L1MEc LINE L1 -3087 3557 2153 1930 131 69 3 chr5 92641756 92642046 -110443486 - AluSq SINE Alu -3 310 2 2538 245 67 50 chr5 92642046 92642958 -110442574 - L1MEc LINE L1 -4491 2153 1258 402 0 0 49 chr5 92642958 92643019 -110442513 + (TTCC)n Simple_repeat Simple_repeat 1 58 0 825 219 13 0 chr5 92643019 92643174 -110442358 - FRAM SINE Alu -16 160 4 3244 226 59 51 chr5 92643176 92644246 -110441286 - L1MEc LINE L1 -5449 1093 16 435 262 106 7 chr5 92644322 92644463 -110441069 + MIR SINE MIR 105 259 -3 250 286 25 43 chr5 92645287 92645448 -110440084 - HAL1b LINE L1 -436 912 755 344 276 46 26 chr5 92645535 92645687 -110439845 - L1MC/D LINE L1 -1986 5822 5668 27 0 0 0 chr5 92646209 92646236 -110439296 + AT_rich Low_complexity Low_complexity 1 27 0 10309 129 58 34 chr5 92646325 92648713 -110436819 + L1P3 LINE L1 8 2514 -3947 254 294 54 0 chr5 92750592 92750684 -110334848 - MIR SINE MIR -70 192 96 201 256 0 23 chr5 92751932 92751975 -110333557 + L2 LINE L2 3223 3264 -8 426 243 87 0 chr5 92752261 92752364 -110333168 + MIR SINE MIR 87 198 -64 1716 189 7 0 chr5 92752691 92752998 -110332534 + AluJb SINE Alu 3 311 -1 30 45 0 0 chr5 92754496 92754540 -110330992 + AT_rich Low_complexity Low_complexity 1 44 0 24 77 0 0 chr5 92754757 92754809 -110330723 + AT_rich Low_complexity Low_complexity 1 52 0 309 195 17 93 chr5 92755087 92755205 -110330327 - L1ME LINE L1 -299 5822 5714 22 35 0 0 chr5 92755375 92755404 -110330128 + AT_rich Low_complexity Low_complexity 1 29 0 2232 124 35 10 chr5 92755407 92755803 -110329729 - L1MA5A LINE L1 0 6297 5892 324 0 0 0 chr5 92755905 92755941 -110329591 + (TA)n Simple_repeat Simple_repeat 1 36 0 297 0 0 0 chr5 92756302 92756335 -110329197 + (TA)n Simple_repeat Simple_repeat 1 33 0 311 344 77 32 chr5 92756570 92756791 -110328741 - HAL1 LINE L1 -1205 1302 1072 1384 176 38 11 chr5 92756921 92757183 -110328349 - AluJo SINE Alu -8 304 36 181 261 225 65 chr5 92757647 92757785 -110327747 + L2 LINE L2 3149 3308 -5 542 101 0 0 chr5 92759453 92759532 -110326000 - MADE1 DNA Mariner -1 79 1 21 0 0 0 chr5 92760126 92760147 -110325385 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 92760407 92760430 -110325102 + AT_rich Low_complexity Low_complexity 1 23 0 243 313 12 0 chr5 92760437 92760517 -110325015 - L3b LINE CR1 -213 1370 1290 300 328 16 38 chr5 92762103 92762286 -110323246 - L1M4 LINE L1 -2104 4042 3864 26 0 0 0 chr5 92762412 92762438 -110323094 + AT_rich Low_complexity Low_complexity 1 26 0 836 277 58 13 chr5 92762481 92762860 -110322672 - L1ME3A LINE L1 -245 5925 5530 437 307 58 9 chr5 92762933 92763158 -110322374 - L1M4 LINE L1 -2325 3821 3586 275 303 119 46 chr5 92763635 92764692 -110320840 + L1ME LINE L1 4101 5234 -912 645 312 72 34 chr5 92764808 92765222 -110320310 + L1ME LINE L1 5383 5812 -358 192 40 0 0 chr5 92765888 92765913 -110319619 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2762 204 16 45 chr5 92765982 92766083 -110319449 + L1M4 LINE L1 4134 4236 -1910 1701 125 12 0 chr5 92766083 92766323 -110319209 + AluSc SINE Alu 22 264 -45 236 91 23 0 chr5 92766328 92766372 -110319160 + (TA)n Simple_repeat Simple_repeat 2 46 0 2762 204 16 45 chr5 92766372 92766947 -110318585 + L1M4 LINE L1 4240 4796 -1350 211 283 0 0 chr5 92766948 92767001 -110318531 + (TATG)n Simple_repeat Simple_repeat 2 54 0 23 86 0 0 chr5 92767952 92768010 -110317522 + AT_rich Low_complexity Low_complexity 1 58 0 262 277 182 7 chr5 92768310 92768458 -110317074 - MIR SINE MIR 0 262 89 446 319 12 38 chr5 92768511 92768671 -110316861 + MER91A DNA MER1_type 4 159 -37 186 43 0 0 chr5 92769388 92769411 -110316121 + (T)n Simple_repeat Simple_repeat 1 23 0 272 120 20 0 chr5 92770578 92770628 -110314904 + (CA)n Simple_repeat Simple_repeat 1 51 0 32 91 0 0 chr5 92771395 92771483 -110314049 + AT_rich Low_complexity Low_complexity 1 88 0 217 326 133 8 chr5 92772004 92772126 -110313406 + MIR3 SINE MIR 57 193 -15 389 305 202 27 chr5 92772205 92772576 -110312956 - L2 LINE L2 -10 3262 2827 265 240 177 0 chr5 92772722 92772818 -110312714 + MIR3 SINE MIR 91 203 -5 285 29 0 0 chr5 92773523 92773557 -110311975 + (TA)n Simple_repeat Simple_repeat 1 34 0 33 66 0 0 chr5 92774007 92774068 -110311464 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 0 chr5 92774392 92774416 -110311116 + AT_rich Low_complexity Low_complexity 1 24 0 1878 255 75 16 chr5 92775308 92775864 -110309668 + MLT1E LTR MaLR 1 589 -4 2178 130 0 0 chr5 92775870 92776177 -110309355 + AluSc SINE Alu 1 307 -2 2080 114 4 0 chr5 92776262 92776593 -110308939 + AluSx SINE Alu 1 332 0 41 48 0 0 chr5 92778500 92778562 -110306970 + AT_rich Low_complexity Low_complexity 1 62 0 852 221 0 0 chr5 92778831 92779003 -110306529 - AluJb SINE Alu -7 305 134 399 41 0 0 chr5 92780802 92780851 -110304681 + (CA)n Simple_repeat Simple_repeat 2 50 0 193 289 13 128 chr5 92782292 92782448 -110303084 - L2 LINE L2 -115 3157 3020 416 279 179 14 chr5 92782477 92782617 -110302915 + MER5A DNA MER1_type 27 189 0 334 338 143 53 chr5 92782619 92783299 -110302233 - L2 LINE L2 -261 3011 2269 12780 173 52 27 chr5 92783345 92786347 -110299185 + L1M1 LINE L1 2 3517 -4048 7040 174 50 45 chr5 92786364 92786711 -110298821 + L1M1 LINE L1 4132 4476 -3089 1903 119 16 47 chr5 92786711 92787029 -110298503 - AluSq SINE Alu -5 308 1 7040 174 50 45 chr5 92787029 92788378 -110297154 + L1M1 LINE L1 4476 5836 -1729 1425 304 34 32 chr5 92788373 92789179 -110296353 + L1PA12 LINE L1 1559 2221 -5360 * 11728 217 21 23 chr5 92789180 92791746 -110293786 + L1MA3 LINE L1 1837 4406 -1899 303 28 0 0 chr5 92791746 92791782 -110293750 + (TAA)n Simple_repeat Simple_repeat 1 36 0 11728 217 21 23 chr5 92791782 92791992 -110293540 + L1MA3 LINE L1 4406 4615 -1690 1991 143 38 30 chr5 92791992 92792011 -110293521 + L1PA15 LINE L1 5795 5812 -353 432 37 0 0 chr5 92792011 92792065 -110293467 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1991 143 38 30 chr5 92792065 92792410 -110293122 + L1PA15 LINE L1 5812 6162 -3 11728 217 21 23 chr5 92792410 92794109 -110291423 + L1MA3 LINE L1 4615 6305 0 231 36 0 0 chr5 92794463 92794491 -110291041 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1906 135 7 4 chr5 92794498 92794779 -110290753 - AluSx SINE Alu -30 282 1 266 309 64 0 chr5 92795627 92795721 -110289811 - MIR SINE MIR -86 176 77 1150 302 103 28 chr5 92796892 92797757 -110287775 + L2 LINE L2 2373 3308 -5 187 318 32 71 chr5 92797919 92798045 -110287487 + MIR SINE MIR 78 198 -64 23 0 0 0 chr5 92798722 92798745 -110286787 + AT_rich Low_complexity Low_complexity 1 23 0 250 177 16 32 chr5 92798842 92798904 -110286628 + (TA)n Simple_repeat Simple_repeat 2 62 0 241 349 12 0 chr5 92799263 92799346 -110286186 - L2 LINE L2 -5 3308 3225 2039 108 4 0 chr5 92800033 92800338 -110285194 + AluSg SINE Alu 2 307 0 1596 127 4 8 chr5 92801562 92801822 -110283710 - L1PA14 LINE L1 -9 6152 5894 1698 165 43 14 chr5 92802149 92802500 -110283032 + MER46B DNA MER2_type 1 236 0 273 301 7 77 chr5 92802580 92802723 -110282809 + MIR SINE MIR 20 152 -110 6625 30 2 0 chr5 92804435 92805223 -110280309 + L1PA4 LINE L1 5366 6155 0 180 0 0 0 chr5 92805743 92805763 -110279769 + (A)n Simple_repeat Simple_repeat 1 20 0 2795 201 55 1 chr5 92806737 92807390 -110278142 - L1MA4A LINE L1 -2830 3316 2629 3433 186 9 27 chr5 92807405 92808198 -110277334 + L1MA4A LINE L1 3322 4288 -1858 2490 143 38 28 chr5 92808214 92808718 -110276814 + L1MA4A LINE L1 5793 6301 -2 422 250 0 9 chr5 92808805 92808921 -110276611 + L1MA9 LINE L1 6176 6290 -22 229 328 69 46 chr5 92810093 92810224 -110275308 - L2 LINE L2 0 3272 3139 592 357 0 29 chr5 92810319 92810596 -110274936 - MLT1L LTR MaLR -18 597 329 340 284 78 0 chr5 92810685 92810801 -110274731 - MLT1L LTR MaLR -339 276 152 192 300 0 17 chr5 92810802 92810862 -110274670 + MIR SINE MIR 77 135 -73 1157 159 5 5 chr5 92810881 92811070 -110274462 + Charlie3 DNA MER1_type 1 189 -2521 * 1886 94 16 0 chr5 92811064 92811318 -110274214 + Charlie3 DNA MER1_type 2445 2702 -8 533 236 20 92 chr5 92811706 92811901 -110273631 + MER5A DNA MER1_type 9 189 0 1420 171 7 40 chr5 92812506 92812781 -110272751 + AluJb SINE Alu 31 296 -16 423 0 0 0 chr5 92813219 92813266 -110272266 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 481 322 28 17 chr5 92813901 92814078 -110271454 + L2 LINE L2 2595 2773 -541 250 356 78 11 chr5 92814110 92814200 -110271332 + MIR SINE MIR 32 127 -135 198 71 0 0 chr5 92814248 92814276 -110271256 + (CA)n Simple_repeat Simple_repeat 2 29 0 316 308 15 0 chr5 92814345 92814475 -110271057 + (TA)n Simple_repeat Simple_repeat 2 133 0 2152 115 53 34 chr5 92814509 92814661 -110270871 + THE1B LTR MaLR 1 149 -215 2169 96 7 0 chr5 92814661 92814969 -110270563 + AluY SINE Alu 1 310 0 2152 115 53 34 chr5 92814969 92815171 -110270361 + THE1B LTR MaLR 149 364 0 364 347 24 42 chr5 92815353 92815566 -110269966 + L3 LINE CR1 940 1148 -429 2254 150 5 13 chr5 92816550 92816943 -110268589 - MLT1B LTR MaLR 0 390 1 1109 241 14 28 chr5 92817199 92817485 -110268047 + MLT1A1 LTR MaLR 84 365 0 1786 153 29 19 chr5 92819113 92819421 -110266111 + AluSx SINE Alu 1 311 -1 229 355 85 26 chr5 92820312 92820501 -110265031 - MIR SINE MIR -30 232 33 21 57 0 0 chr5 92821043 92821078 -110264454 + AT_rich Low_complexity Low_complexity 1 35 0 281 352 83 70 chr5 92821320 92821704 -110263828 + L2 LINE L2 2881 3269 -3 302 379 0 0 chr5 92822096 92822191 -110263341 - MIR SINE MIR -56 152 58 407 333 102 6 chr5 92822686 92822863 -110262669 + MER91A DNA MER1_type 1 194 -2 1079 144 0 48 chr5 92823668 92823855 -110261677 - AluSg/x SINE Alu 0 310 133 307 346 120 14 chr5 92824582 92824799 -110260733 - MIR SINE MIR -3 259 20 318 213 32 122 chr5 92825361 92825491 -110260041 - MER53 DNA DNA -5 184 75 239 53 0 26 chr5 92825491 92825529 -110260003 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 318 213 32 122 chr5 92825529 92825586 -110259946 - MER53 DNA DNA -114 75 14 600 278 159 4 chr5 92825644 92825871 -110259661 - MIR SINE MIR 0 262 1 22 56 0 0 chr5 92826132 92826168 -110259364 + AT_rich Low_complexity Low_complexity 1 36 0 203 83 0 62 chr5 92826168 92826216 -110259316 + (TA)n Simple_repeat Simple_repeat 2 46 0 1885 162 3 0 chr5 92826535 92826844 -110258688 + AluJb SINE Alu 1 310 -2 277 333 27 60 chr5 92826900 92827083 -110258449 - MER5A DNA MER1_type -6 183 7 221 81 0 27 chr5 92827233 92827270 -110258262 + (TA)n Simple_repeat Simple_repeat 2 37 0 246 267 47 0 chr5 92827271 92827357 -110258175 - L1MC4 LINE L1 -1340 6702 6613 186 174 0 0 chr5 92827357 92827403 -110258129 + (TA)n Simple_repeat Simple_repeat 1 46 0 2115 116 3 0 chr5 92827968 92828262 -110257270 - AluSx SINE Alu -17 295 1 2484 64 3 0 chr5 92829572 92829898 -110255634 - L1PA8 LINE L1 -1 6171 5845 358 285 32 6 chr5 92829908 92830066 -110255466 + MER103 DNA DNA 4 165 -1 1908 166 8 33 chr5 92830608 92830969 -110254563 - THE1A LTR MaLR -3 352 1 21 36 0 0 chr5 92831488 92831516 -110254016 + AT_rich Low_complexity Low_complexity 1 28 0 2608 43 3 0 chr5 92835598 92835903 -110249629 + AluY SINE Alu 1 306 -5 43063 50 2 3 chr5 92836018 92842159 -110243373 + L1PA5 LINE L1 11 6148 -6 342 303 41 33 chr5 92843469 92843591 -110241941 - L2 LINE L2 0 3272 3150 474 346 39 57 chr5 92843879 92844029 -110241503 - L2 LINE L2 -466 2848 2697 204 67 0 0 chr5 92844029 92844059 -110241473 + (CA)n Simple_repeat Simple_repeat 2 31 0 474 346 39 57 chr5 92844059 92844292 -110241240 - L2 LINE L2 -617 2697 2472 185 350 43 0 chr5 92844311 92844428 -110241104 - L2 LINE L2 -1209 2105 1984 215 339 115 54 chr5 92844517 92844647 -110240885 - L2 LINE L2 -3 3269 3132 1609 190 3 7 chr5 92844798 92845087 -110240445 + AluJo SINE Alu 1 288 -24 213 132 0 0 chr5 92845087 92845125 -110240407 + (GGAGA)n Simple_repeat Simple_repeat 1 38 0 234 154 0 0 chr5 92846749 92846788 -110238744 - L2 LINE L2 -19 3253 3215 699 243 54 5 chr5 92847256 92847441 -110238091 + MIR SINE MIR 66 259 -3 31 0 0 0 chr5 92851188 92851219 -110234313 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 92851264 92851286 -110234246 + AT_rich Low_complexity Low_complexity 1 22 0 2478 73 0 0 chr5 92851513 92851813 -110233719 + AluY SINE Alu 1 300 -11 23 33 0 0 chr5 92854369 92854399 -110231133 + AT_rich Low_complexity Low_complexity 1 30 0 422 316 128 5 chr5 92855038 92855225 -110230307 + MIR SINE MIR 50 259 -3 3004 177 27 58 chr5 92855355 92856204 -110229328 + LTR1 LTR ERV1 2 785 0 378 0 0 0 chr5 92856286 92856328 -110229204 + (TG)n Simple_repeat Simple_repeat 2 43 0 320 246 44 98 chr5 92857171 92857354 -110228178 + L1MC4a LINE L1 1292 1464 -5076 241 225 113 0 chr5 92857513 92857584 -110227948 + L1MC4a LINE L1 5151 5229 -1311 647 303 64 53 chr5 92857954 92858483 -110227049 + L1MC4a LINE L1 5689 6223 -1979 276 239 15 0 chr5 92858484 92858551 -110226981 + GA-rich Low_complexity Low_complexity 2 69 0 12777 28 0 0 chr5 92858752 92861040 -110224492 + L1PA3 LINE L1 3866 6153 -2 216 0 0 0 chr5 92861141 92861165 -110224367 + (TTC)n Simple_repeat Simple_repeat 2 25 0 2074 123 3 0 chr5 92861169 92861454 -110224078 - AluSx SINE Alu -26 286 1 300 70 0 0 chr5 92861566 92861609 -110223923 + (CA)n Simple_repeat Simple_repeat 1 43 0 213 65 0 0 chr5 92861625 92861656 -110223876 + (TA)n Simple_repeat Simple_repeat 2 32 0 5478 199 26 39 chr5 92861656 92862989 -110222543 - Charlie1a DNA MER1_type -106 1349 34 2246 125 19 30 chr5 92863055 92863422 -110222110 - THE1B LTR MaLR 0 364 2 264 185 12 25 chr5 92863458 92863539 -110221993 + CT-rich Low_complexity Low_complexity 2 81 0 274 236 179 41 chr5 92863638 92863816 -110221716 + L1ME LINE L1 5407 5619 -543 2688 229 106 16 chr5 92864497 92865225 -110220307 + MER21B LTR ERV1 48 840 -23 2269 38 0 86 chr5 92865679 92865993 -110219539 + AluY SINE Alu 13 299 -12 21 0 0 0 chr5 92868305 92868326 -110217206 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr5 92868788 92868820 -110216712 + AT_rich Low_complexity Low_complexity 1 32 0 298 294 22 35 chr5 92869215 92869366 -110216166 + MIR SINE MIR 40 188 -65 9269 126 41 19 chr5 92870787 92872283 -110213249 - L1P3 LINE L1 -4923 1538 10 407 271 141 67 chr5 92872407 92872768 -110212764 - MLT1J LTR MaLR -18 493 106 228 283 110 72 chr5 92872864 92873101 -110212431 - MIR SINE MIR -15 247 2 224 294 184 57 chr5 92873288 92873516 -110212016 - L2 LINE L2 -34 3279 3023 187 259 121 0 chr5 92873507 92873565 -110211967 + L2 LINE L2 3249 3313 0 * 215 321 9 55 chr5 92875095 92875204 -110210328 + L2 LINE L2 2562 2665 -649 190 386 0 0 chr5 92875217 92875287 -110210245 - L2 LINE L2 -3 3269 3200 373 329 75 25 chr5 92876130 92876291 -110209241 + MER5A DNA MER1_type 21 189 0 2350 97 0 6 chr5 92876341 92876652 -110208880 + AluSc SINE Alu 1 309 0 559 253 121 25 chr5 92876830 92877028 -110208504 + MIR SINE MIR 44 260 -2 253 315 145 30 chr5 92879127 92879327 -110206205 - L2 LINE L2 -219 3053 2831 2041 145 0 0 chr5 92879334 92879631 -110205901 - AluSg SINE Alu -11 299 3 28 0 0 0 chr5 92880764 92880792 -110204740 + AT_rich Low_complexity Low_complexity 1 28 0 10582 102 48 1 chr5 92880916 92882425 -110203107 + THE1B-int LTR MaLR 1 1580 0 2274 107 30 35 chr5 92882425 92882791 -110202741 + THE1B LTR MaLR 1 364 0 192 324 139 0 chr5 92883252 92883360 -110202172 + L2 LINE L2 3150 3272 0 30 0 0 0 chr5 92883440 92883470 -110202062 + AT_rich Low_complexity Low_complexity 1 30 0 1599 191 31 6 chr5 92884273 92884630 -110200902 + L1PA13 LINE L1 2823 3188 -2958 516 47 0 0 chr5 92884628 92884692 -110200840 - L1PA7 LINE L1 -1751 4395 4332 * 6596 80 15 7 chr5 92884692 92886407 -110199125 + L1PA7 LINE L1 4408 6150 -4 267 301 39 29 chr5 92886940 92887043 -110198489 + MIR SINE MIR 86 189 -73 9517 187 8 21 chr5 92887045 92888280 -110197252 + L1PA13 LINE L1 3168 4418 -1745 228 35 0 0 chr5 92888280 92888309 -110197223 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9517 187 8 21 chr5 92888309 92890078 -110195454 + L1PA13 LINE L1 4418 6163 0 24 32 0 0 chr5 92890097 92890128 -110195404 + AT_rich Low_complexity Low_complexity 1 31 0 195 278 56 0 chr5 92892837 92892891 -110192641 + L2 LINE L2 3242 3298 -15 22 0 0 0 chr5 92893054 92893076 -110192456 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr5 92893083 92893130 -110192402 + AT_rich Low_complexity Low_complexity 1 47 0 36 40 0 0 chr5 92893408 92893458 -110192074 + AT_rich Low_complexity Low_complexity 1 50 0 25 51 0 0 chr5 92893943 92893982 -110191550 + AT_rich Low_complexity Low_complexity 1 39 0 2137 120 0 0 chr5 92894900 92895216 -110190316 + AluSx SINE Alu 1 316 0 213 350 70 10 chr5 92895725 92895825 -110189707 + L2 LINE L2 3201 3306 -7 1911 136 152 11 chr5 92896592 92896967 -110188565 + MSTA LTR MaLR 1 428 0 648 330 112 0 chr5 92897168 92897453 -110188079 - L2 LINE L2 -12 3301 2985 224 366 155 19 chr5 92897648 92898080 -110187452 - L2 LINE L2 -357 2957 2467 198 0 0 0 chr5 92899825 92899847 -110185685 + (T)n Simple_repeat Simple_repeat 1 22 0 193 292 42 14 chr5 92900399 92900471 -110185061 + L3 LINE CR1 1503 1576 -1 214 333 42 33 chr5 92900579 92900699 -110184833 + L2 LINE L2 3171 3291 -22 2614 32 0 10 chr5 92902697 92903006 -110182526 - AluY SINE Alu -5 306 1 290 337 0 11 chr5 92904340 92904429 -110181103 + MIR SINE MIR 34 121 -141 645 214 40 40 chr5 92904439 92904612 -110180920 + MER5B DNA MER1_type 1 173 -5 216 0 0 0 chr5 92904889 92904913 -110180619 + (T)n Simple_repeat Simple_repeat 1 24 0 372 22 0 0 chr5 92907211 92907256 -110178276 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 193 362 17 60 chr5 92907552 92907668 -110177864 + L2 LINE L2 3137 3247 -25 394 246 123 65 chr5 92908002 92908038 -110177494 - MIR SINE MIR -72 190 158 1192 35 0 0 chr5 92908038 92908183 -110177349 - L1PA5 LINE L1 0 6154 6010 394 246 123 65 chr5 92908183 92908284 -110177248 - MIR SINE MIR -104 158 45 227 154 0 58 chr5 92908504 92908556 -110176976 - L2 LINE L2 0 3313 3265 1387 237 115 5 chr5 92912008 92912418 -110173114 - Charlie4a DNA MER1_type -3 505 51 23 0 0 0 chr5 92915364 92915387 -110170145 + AT_rich Low_complexity Low_complexity 1 23 0 238 367 89 68 chr5 92915764 92916001 -110169531 + L2 LINE L2 2971 3212 -60 23 33 0 0 chr5 92916567 92916597 -110168935 + AT_rich Low_complexity Low_complexity 1 30 0 301 303 105 67 chr5 92916839 92917077 -110168455 - MIR SINE MIR -10 252 6 586 326 51 17 chr5 92917160 92917396 -110168136 + MIR SINE MIR 1 244 -18 2043 118 0 16 chr5 92917627 92917931 -110167601 + AluSx SINE Alu 1 299 -13 472 61 98 6 chr5 92917956 92918119 -110167413 + (TA)n Simple_repeat Simple_repeat 2 179 0 376 103 85 0 chr5 92918140 92918305 -110167227 + (TA)n Simple_repeat Simple_repeat 1 179 0 25 0 0 0 chr5 92918305 92918330 -110167202 + AT_rich Low_complexity Low_complexity 1 25 0 200 111 0 28 chr5 92918634 92918670 -110166862 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 1694 136 42 55 chr5 92919056 92919365 -110166167 + AluSx SINE Alu 3 307 -5 24 32 0 0 chr5 92919463 92919494 -110166038 + AT_rich Low_complexity Low_complexity 1 31 0 198 0 0 0 chr5 92919510 92919532 -110166000 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 21 0 0 0 chr5 92920434 92920455 -110165077 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 92921626 92921664 -110163868 + AT_rich Low_complexity Low_complexity 1 38 0 275 286 107 9 chr5 92921866 92921978 -110163554 + MIR3 SINE MIR 14 136 -72 606 173 63 16 chr5 92922413 92922540 -110162992 - FLAM_C SINE Alu 0 133 1 208 250 0 0 chr5 92922850 92922894 -110162638 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 390 42 0 0 chr5 92922894 92922942 -110162590 + (CA)n Simple_repeat Simple_repeat 2 49 0 190 357 42 49 chr5 92924014 92924157 -110161375 + L2 LINE L2 3121 3262 -10 2031 131 3 0 chr5 92924671 92924962 -110160570 + AluSg SINE Alu 1 292 -18 336 64 0 0 chr5 92925018 92925065 -110160467 + (GGGA)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr5 92925098 92925119 -110160413 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 92926937 92926974 -110158558 + AT_rich Low_complexity Low_complexity 1 37 0 318 154 39 29 chr5 92927147 92927251 -110158281 + (TA)n Simple_repeat Simple_repeat 2 106 0 202 58 0 96 chr5 92927276 92927328 -110158204 + (GAA)n Simple_repeat Simple_repeat 1 47 0 381 43 0 0 chr5 92927621 92927668 -110157864 + (TA)n Simple_repeat Simple_repeat 2 48 0 534 16 0 0 chr5 92927669 92927732 -110157800 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 351 317 7 35 chr5 92929775 92929917 -110155615 - MER5B DNA MER1_type -40 138 1 434 145 0 12 chr5 92929956 92930039 -110155493 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 181 273 65 39 chr5 92930924 92931001 -110154531 - L2 LINE L2 -202 3070 2992 376 110 171 0 chr5 92931489 92931571 -110153961 + MER53 DNA DNA 94 189 0 769 264 92 22 chr5 92931877 92932104 -110153428 - MIR SINE MIR -12 250 8 271 276 83 0 chr5 92932599 92932755 -110152777 - L1ME3A LINE L1 -14 6156 5988 649 255 130 56 chr5 92932857 92933249 -110152283 - L1ME3A LINE L1 -216 5954 5534 278 188 0 218 chr5 92934613 92934778 -110150754 + L1ME1 LINE L1 35 163 -6233 2230 268 119 23 chr5 92934789 92935842 -110149690 + L1ME1 LINE L1 241 1394 -5002 299 219 184 0 chr5 92935900 92936014 -110149518 + L1ME1 LINE L1 4965 5099 -1116 824 242 35 17 chr5 92936023 92936915 -110148617 + L1ME1 LINE L1 5218 6231 -4 396 59 0 0 chr5 92936971 92937022 -110148510 + (CA)n Simple_repeat Simple_repeat 1 51 0 2222 106 0 19 chr5 92937631 92937943 -110147589 - AluSg SINE Alu -4 306 1 21 57 0 0 chr5 92938608 92938643 -110146889 + AT_rich Low_complexity Low_complexity 1 35 0 1723 122 9 101 chr5 92939016 92939353 -110146179 - AluSx SINE Alu -6 306 1 1066 89 0 0 chr5 92939353 92939488 -110146044 - AluSq/x SINE Alu -178 135 1 414 298 116 25 chr5 92939743 92940030 -110145502 - MLT1H LTR MaLR -114 295 22 516 287 177 45 chr5 92940380 92940419 -110145113 - HAL1 LINE L1 -592 1915 1883 2276 101 3 0 chr5 92940419 92940725 -110144807 - AluSx SINE Alu -5 307 1 516 287 177 45 chr5 92940725 92941663 -110143869 - HAL1 LINE L1 -624 1883 809 982 37 60 0 chr5 92942922 92943056 -110142476 + L1PA13 LINE L1 6018 6159 -4 191 100 0 25 chr5 92943216 92943256 -110142276 + (TATG)n Simple_repeat Simple_repeat 2 40 0 333 215 51 62 chr5 92945264 92945459 -110140073 - Charlie7 DNA MER1_type -3 2609 2417 * 714 261 104 36 chr5 92945449 92945805 -110139727 - Charlie7 DNA MER1_type -1888 724 345 328 353 22 7 chr5 92946205 92946341 -110139191 + L2 LINE L2 3175 3312 -1 528 37 0 37 chr5 92946460 92946542 -110138990 + (TTTCC)n Simple_repeat Simple_repeat 2 80 0 2372 125 30 8 chr5 92946544 92946943 -110138589 - L1PB1 LINE L1 0 6151 5744 303 255 222 0 chr5 92947447 92947600 -110137932 - MER115 DNA AcHobo -2 691 505 928 336 17 3 chr5 92947753 92948048 -110137484 - MER115 DNA AcHobo -394 299 1 23 0 0 0 chr5 92949789 92949812 -110135720 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr5 92950056 92950085 -110135447 + AT_rich Low_complexity Low_complexity 1 29 0 274 320 0 20 chr5 92950107 92950207 -110135325 - L2 LINE L2 -4 3309 3212 220 300 0 0 chr5 92950363 92950423 -110135109 - L2 LINE L2 -4 3309 3250 222 175 32 32 chr5 92952023 92952086 -110133446 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 1009 305 56 47 chr5 92952171 92952938 -110132594 - L2 LINE L2 0 3313 2523 270 212 0 45 chr5 92952953 92953019 -110132513 - L2 LINE L2 -1505 1809 1747 221 355 0 0 chr5 92953033 92953109 -110132423 + CT-rich Low_complexity Low_complexity 2 77 0 403 264 138 63 chr5 92954364 92954697 -110130835 + L2 LINE L2 2526 2883 -431 3437 189 38 13 chr5 92954918 92955633 -110129899 - L1MD2 LINE L1 -24 6335 5603 430 252 39 16 chr5 92955651 92955778 -110129754 + L2 LINE L2 3182 3311 -2 38 0 0 0 chr5 92956464 92956502 -110129030 + AT_rich Low_complexity Low_complexity 1 38 0 2008 125 4 0 chr5 92956503 92956784 -110128748 - AluSq SINE Alu -31 282 1 248 310 88 23 chr5 92957428 92957439 -110128093 + MER5A DNA MER1_type 4 13 -176 974 207 6 0 chr5 92957439 92957613 -110127919 + MER5B DNA MER1_type 1 175 -3 248 310 88 23 chr5 92957613 92957772 -110127760 + MER5A DNA MER1_type 13 185 -4 1767 184 7 7 chr5 92957989 92958323 -110127209 + AluJo SINE Alu 1 312 0 558 117 0 0 chr5 92958406 92958483 -110127049 + LTR32 LTR ERVL 9 85 -386 1202 181 26 18 chr5 92958498 92958725 -110126807 + LTR32 LTR ERVL 243 471 0 1241 273 38 11 chr5 92958727 92959093 -110126439 + HERVL32 LTR ERVL 16 391 -3027 1575 244 29 37 chr5 92959168 92959622 -110125910 + HERVL32 LTR ERVL 652 1101 -2317 1574 247 40 34 chr5 92959696 92960165 -110125367 + HERVL32 LTR ERVL 1240 1711 -1707 402 192 181 82 chr5 92960154 92960336 -110125196 + HERVL32 LTR ERVL 2350 2549 -869 * 360 268 48 42 chr5 92960315 92960483 -110125049 + PRIMA41-int LTR ERV1 6297 6465 -1291 * 596 231 93 11 chr5 92960459 92960641 -110124891 + HERVL32 LTR ERVL 3221 3417 -1 234 100 0 75 chr5 92960643 92960683 -110124849 + LTR32 LTR ERVL 14 50 -421 * 1121 188 45 18 chr5 92960681 92960904 -110124628 + LTR32 LTR ERVL 243 471 0 329 278 111 32 chr5 92961472 92961598 -110123934 - MER5A DNA MER1_type 0 189 54 520 68 83 0 chr5 92961871 92962004 -110123528 + (TA)n Simple_repeat Simple_repeat 2 145 0 321 172 0 0 chr5 92962412 92962476 -110123056 + (TG)n Simple_repeat Simple_repeat 2 65 0 25 0 0 0 chr5 92962492 92962517 -110123015 + AT_rich Low_complexity Low_complexity 1 25 0 4013 172 60 5 chr5 92962604 92963430 -110122102 + L1MC2 LINE L1 5463 6334 -10 423 287 174 1 chr5 92963868 92964014 -110121518 - MER5A DNA MER1_type -1 188 9 288 371 10 0 chr5 92964327 92964424 -110121108 - MIR SINE MIR -145 117 20 185 313 98 27 chr5 92965329 92965441 -110120091 + L2 LINE L2 2965 3084 -188 291 364 68 18 chr5 92965780 92966000 -110119532 + L3 LINE CR1 1345 1575 -2 806 319 33 0 chr5 92966319 92966560 -110118972 + MIR SINE MIR 1 249 -13 1810 155 23 19 chr5 92967829 92967955 -110117577 + AluJb SINE Alu 1 125 -187 279 0 0 0 chr5 92967955 92967986 -110117546 + (CA)n Simple_repeat Simple_repeat 2 32 0 1810 155 23 19 chr5 92967986 92968169 -110117363 + AluJb SINE Alu 125 311 -1 234 332 62 44 chr5 92968761 92968987 -110116545 - MIR SINE MIR -13 249 20 21 0 0 0 chr5 92969130 92969151 -110116381 + AT_rich Low_complexity Low_complexity 1 21 0 295 268 24 12 chr5 92969152 92969234 -110116298 - MIR3 SINE MIR -1 207 125 2028 114 4 4 chr5 92969504 92969825 -110115707 + AluSq SINE Alu 4 324 0 800 255 74 9 chr5 92973896 92974127 -110111405 - MLT1C LTR MaLR -16 451 206 1844 155 54 59 chr5 92974223 92974610 -110110922 + MLT1B LTR MaLR 5 389 -1 199 273 25 83 chr5 92974773 92974894 -110110638 - L2 LINE L2 -3177 137 24 24 32 0 0 chr5 92975153 92975184 -110110348 + AT_rich Low_complexity Low_complexity 1 31 0 333 208 0 0 chr5 92976211 92976283 -110109249 + (TA)n Simple_repeat Simple_repeat 1 72 0 299 364 71 0 chr5 92978324 92978464 -110107068 - L2 LINE L2 -6 3266 3117 276 290 229 45 chr5 92978834 92979144 -110106388 - L2 LINE L2 -609 2705 2339 244 240 0 0 chr5 92981749 92981799 -110103733 + L2 LINE L2 2485 2534 -780 579 254 95 141 chr5 92981895 92982348 -110103184 + L2 LINE L2 2878 3309 -4 461 164 0 0 chr5 92982560 92982633 -110102899 + U6 snRNA snRNA 1 73 -34 443 359 16 64 chr5 92982940 92983125 -110102407 - L2 LINE L2 -177 3095 2930 1608 125 8 0 chr5 92983125 92983365 -110102167 + AluSc SINE Alu 68 309 0 443 359 16 64 chr5 92983365 92983566 -110101966 - L2 LINE L2 -342 2930 2721 462 303 26 0 chr5 92984201 92984353 -110101179 + MER113 DNA MER1_type? 366 521 0 639 60 0 0 chr5 92985868 92985951 -110099581 + L1PA5 LINE L1 6065 6147 -7 31 26 0 0 chr5 92986069 92986107 -110099425 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 92987612 92987642 -110097890 + AT_rich Low_complexity Low_complexity 1 30 0 707 259 89 34 chr5 92987704 92987997 -110097535 + MLT1I LTR MaLR 6 314 -95 190 320 176 36 chr5 92988225 92988447 -110097085 - L2 LINE L2 -817 2497 2245 22 0 0 0 chr5 92989990 92990012 -110095520 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr5 92990165 92990213 -110095319 + AT_rich Low_complexity Low_complexity 1 48 0 25 0 0 0 chr5 92990475 92990500 -110095032 + AT_rich Low_complexity Low_complexity 1 25 0 1736 152 7 17 chr5 92990603 92990893 -110094639 - AluJb SINE Alu -25 287 1 7789 24 0 0 chr5 92991199 92992146 -110093386 - L1PA3 LINE L1 -2604 3542 2596 15318 28 0 13 chr5 92992146 92994075 -110091457 + L1PA3 LINE L1 3562 5473 -682 2835 16 0 0 chr5 92994075 92994391 -110091141 + AluYb8 SINE Alu 1 316 -2 15318 28 0 13 chr5 92994391 92995064 -110090468 + L1PA3 LINE L1 5473 6153 -2 278 277 36 36 chr5 92995175 92995287 -110090245 + L2 LINE L2 3141 3252 -20 192 93 0 70 chr5 92995310 92995353 -110090179 + MER5C DNA MER1_type 272 311 -13 384 180 23 133 chr5 92996647 92996775 -110088757 + MLT1C LTR MaLR 1 114 -391 1934 164 105 18 chr5 92996778 92997169 -110088363 + MSTB1 LTR MaLR 3 427 -5 995 256 46 26 chr5 92997180 92997531 -110088001 + MLT1C LTR MaLR 110 467 0 189 107 0 0 chr5 92997695 92997723 -110087809 + (TC)n Simple_repeat Simple_repeat 1 28 0 358 198 32 71 chr5 92997861 92997987 -110087545 + MLT1D LTR MaLR 94 214 -291 968 238 142 32 chr5 92999953 93000264 -110085268 + MER2 DNA MER2_type 1 345 0 1869 147 3 10 chr5 93000397 93000697 -110084835 - AluSx SINE Alu -14 298 1 719 294 163 56 chr5 93000767 93000935 -110084597 - L2 LINE L2 0 3313 3164 2384 62 3 0 chr5 93000935 93001227 -110084305 - AluY SINE Alu -16 295 3 719 294 163 56 chr5 93001227 93001895 -110083637 - L2 LINE L2 -149 3164 2364 234 375 0 10 chr5 93002204 93002308 -110083224 + MIR SINE MIR 46 148 -114 349 278 49 35 chr5 93002499 93002643 -110082889 - MIR SINE MIR -41 221 76 1870 178 31 29 chr5 93003037 93003391 -110082141 + MLT2C1 LTR ERVL 1 358 -39 426 20 0 0 chr5 93003391 93003442 -110082090 + (CA)n Simple_repeat Simple_repeat 2 52 0 1870 178 31 29 chr5 93003442 93003470 -110082062 + MLT2C1 LTR ERVL 358 384 -13 648 128 32 24 chr5 93004112 93004237 -110081295 + L1 LINE L1 8 133 -7432 * 4057 116 120 10 chr5 93004234 93004925 -110080607 + L1 LINE L1 1099 1865 -5700 577 221 0 0 chr5 93004916 93005047 -110080485 + L1 LINE L1 4235 4365 -3200 * 5430 105 69 22 chr5 93005044 93005940 -110079592 + L1MA3 LINE L1 5367 6304 -1 22 70 0 0 chr5 93006711 93006754 -110078778 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr5 93006882 93006923 -110078609 + AT_rich Low_complexity Low_complexity 1 41 0 1775 212 49 4 chr5 93008341 93008846 -110076686 - L1M2 LINE L1 -743 5403 4955 * 3418 180 52 12 chr5 93008845 93009571 -110075961 + L1MA9 LINE L1 5519 6273 -39 273 350 0 17 chr5 93010471 93010588 -110074944 - MARNA DNA Mariner -386 200 86 21 0 0 0 chr5 93011098 93011119 -110074413 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr5 93011701 93011742 -110073790 + AT_rich Low_complexity Low_complexity 1 41 0 4845 130 26 2 chr5 93012879 93013727 -110071805 + L1PA16 LINE L1 5254 6156 -10 595 148 79 0 chr5 93013741 93013842 -110071690 - MER33 DNA MER1_type -215 109 1 30 45 0 0 chr5 93015009 93015053 -110070479 + AT_rich Low_complexity Low_complexity 1 44 0 222 304 38 13 chr5 93015570 93015649 -110069883 + GA-rich Low_complexity Low_complexity 4 84 0 2331 93 3 0 chr5 93016082 93016383 -110069149 - AluSp SINE Alu -11 302 1 324 0 0 0 chr5 93016440 93016476 -110069056 + (TG)n Simple_repeat Simple_repeat 1 36 0 205 260 286 0 chr5 93016669 93016746 -110068786 + MER5B DNA MER1_type 2 100 -78 298 333 60 0 chr5 93017589 93017706 -110067826 - MIR SINE MIR -53 209 86 287 320 131 13 chr5 93018894 93019047 -110066485 + MER5A DNA MER1_type 13 183 -6 604 305 63 63 chr5 93019302 93019732 -110065800 + MLT1L LTR MaLR 168 597 -18 512 295 8 16 chr5 93021204 93021333 -110064199 + L2 LINE L2 3140 3267 -5 249 33 0 0 chr5 93023822 93023852 -110061680 + (TG)n Simple_repeat Simple_repeat 2 31 0 23 33 0 0 chr5 93024329 93024359 -110061173 + AT_rich Low_complexity Low_complexity 1 30 0 690 298 101 8 chr5 93024796 93025044 -110060488 - L3 LINE CR1 -295 1282 1012 577 76 0 0 chr5 93025116 93025195 -110060337 - L1PA5 LINE L1 -2 6152 6074 441 51 0 5 chr5 93025195 93025246 -110060286 + L1P2 LINE L1 5687 5737 -417 31 26 0 0 chr5 93025821 93025859 -110059673 + AT_rich Low_complexity Low_complexity 1 38 0 1708 133 91 16 chr5 93026107 93026416 -110059116 + MER1B DNA MER1_type 4 335 -2 829 224 9 67 chr5 93027552 93027614 -110057918 - MIR SINE MIR -30 232 168 2379 49 0 39 chr5 93027614 93027921 -110057611 + AluY SINE Alu 1 295 -16 829 224 9 67 chr5 93027921 93028068 -110057464 - MIR SINE MIR -94 168 35 1901 165 14 0 chr5 93028191 93028488 -110057044 + AluJb SINE Alu 1 301 -11 1685 145 11 35 chr5 93029982 93030264 -110055268 - AluSx SINE Alu -37 275 1 1057 140 123 0 chr5 93030463 93030634 -110054898 + MER1B DNA MER1_type 33 224 -73 394 189 0 14 chr5 93030632 93030706 -110054826 + MER1B DNA MER1_type 267 339 0 * 183 295 51 64 chr5 93031392 93031470 -110054062 - L3 LINE CR1 -1317 260 184 28 61 0 0 chr5 93031561 93031610 -110053922 + AT_rich Low_complexity Low_complexity 1 49 0 202 229 21 0 chr5 93033365 93033413 -110052119 + (ATAAG)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr5 93033514 93033544 -110051988 + AT_rich Low_complexity Low_complexity 1 30 0 317 234 91 0 chr5 93033706 93033783 -110051749 + L2 LINE L2 3230 3313 0 818 308 120 52 chr5 93033806 93034608 -110050924 + L2 LINE L2 1790 2645 -669 690 105 15 15 chr5 93035047 93035180 -110050352 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 233 317 49 37 chr5 93035197 93035279 -110050253 + L2 LINE L2 3189 3271 -1 631 95 11 0 chr5 93035488 93035583 -110049949 + AluS SINE Alu 1 96 -216 2062 134 0 13 chr5 93036776 93037090 -110048442 - AluSg SINE Alu 0 310 1 2304 81 0 10 chr5 93037885 93038194 -110047338 + AluY SINE Alu 1 306 -5 281 354 10 10 chr5 93038749 93038848 -110046684 - L2 LINE L2 -1 3271 3173 31 102 0 0 chr5 93039460 93039568 -110045964 + AT_rich Low_complexity Low_complexity 1 108 0 560 303 110 9 chr5 93040233 93040461 -110045071 + MLT1H LTR MaLR 40 290 -259 187 182 23 136 chr5 93041275 93041363 -110044169 - L3 LINE CR1 -251 1326 1249 183 222 0 44 chr5 93041493 93041538 -110043994 - L2 LINE L2 -365 2907 2865 489 181 22 0 chr5 93041758 93041896 -110043636 + (TCTA)n Simple_repeat Simple_repeat 3 143 0 451 360 159 34 chr5 93041907 93042496 -110043036 - L2 LINE L2 -25 3247 2594 244 258 16 0 chr5 93043468 93043530 -110042002 + G-rich Low_complexity Low_complexity 5 67 0 519 301 10 74 chr5 93043844 93044143 -110041389 - LTR16B LTR ERVL -12 452 173 2137 91 52 0 chr5 93044642 93044928 -110040604 - AluY SINE Alu -8 303 3 236 370 22 7 chr5 93045934 93046072 -110039460 - L2 LINE L2 -251 3021 2882 497 169 95 61 chr5 93047819 93047967 -110037565 + MER5B DNA MER1_type 1 153 -25 226 229 16 33 chr5 93047973 93048034 -110037498 + GA-rich Low_complexity Low_complexity 2 61 0 1983 150 7 3 chr5 93048331 93048638 -110036894 - AluSx SINE Alu 0 312 5 303 356 64 23 chr5 93048688 93049142 -110036390 - L2 LINE L2 0 3272 1774 236 256 47 23 chr5 93049280 93049366 -110036166 + MIR SINE MIR 170 257 -5 1728 159 13 32 chr5 93049629 93049937 -110035595 + AluSx SINE Alu 1 302 -10 220 287 178 49 chr5 93049998 93050245 -110035287 - L2 LINE L2 -1967 1347 1069 500 326 32 32 chr5 93052562 93052780 -110032752 - MIR SINE MIR -13 249 32 1952 121 3 3 chr5 93053526 93053838 -110031694 + AluSx SINE Alu 1 312 0 21 36 0 0 chr5 93054625 93054653 -110030879 + AT_rich Low_complexity Low_complexity 1 28 0 242 327 44 5 chr5 93054845 93055048 -110030484 - L1MC/D LINE L1 -316 5805 5667 368 231 39 39 chr5 93055689 93055845 -110029687 + L1ME4a LINE L1 5964 6119 -2 283 281 74 59 chr5 93056305 93056440 -110029092 - MIR SINE MIR -31 231 95 185 167 0 0 chr5 93056599 93056635 -110028897 - L2 LINE L2 -1 3312 3277 24 53 0 0 chr5 93056703 93056741 -110028791 + AT_rich Low_complexity Low_complexity 1 38 0 1650 51 0 0 chr5 93056886 93057081 -110028451 + AluY SINE Alu 87 281 -30 413 19 19 0 chr5 93057084 93057138 -110028394 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr5 93057818 93057840 -110027692 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 93057986 93058018 -110027514 + AT_rich Low_complexity Low_complexity 1 32 0 186 189 54 0 chr5 93058122 93058159 -110027373 - MIR SINE MIR -2 260 222 276 291 121 0 chr5 93058206 93058347 -110027185 - MIR SINE MIR -59 203 46 511 287 128 20 chr5 93059045 93059240 -110026292 + MIR SINE MIR 26 241 -21 1777 168 23 0 chr5 93059763 93060067 -110025465 - AluJo SINE Alu -1 311 1 480 93 0 0 chr5 93060402 93060477 -110025055 + (CA)n Simple_repeat Simple_repeat 2 76 0 347 347 58 23 chr5 93060629 93060802 -110024730 - MIR3 SINE MIR -5 203 25 2068 105 0 24 chr5 93062240 93062534 -110022998 - AluSg SINE Alu -20 290 4 1211 185 31 13 chr5 93062805 93063123 -110022409 + MLT1A1 LTR MaLR 1 355 -10 216 316 234 19 chr5 93064631 93064789 -110020743 + MIR SINE MIR 60 251 -11 620 302 9 47 chr5 93066241 93066336 -110019196 + MIR SINE MIR 56 153 -109 1541 174 43 26 chr5 93066336 93066641 -110018891 + AluJo SINE Alu 1 310 -2 620 302 9 47 chr5 93066641 93066760 -110018772 + MIR SINE MIR 153 262 0 225 281 49 12 chr5 93067438 93067520 -110018012 - L1MC5 LINE L1 -66 7895 7811 2168 102 0 32 chr5 93067521 93067836 -110017696 - AluSg SINE Alu -5 305 1 512 308 141 27 chr5 93068041 93068480 -110017052 - L1ME3 LINE L1 -264 5898 5410 341 291 132 23 chr5 93069455 93069720 -110015812 + L2 LINE L2 2292 2585 -729 198 222 178 89 chr5 93071105 93071195 -110014337 + L2 LINE L2 3209 3306 -7 2969 234 75 5 chr5 93073332 93074113 -110011419 + L2 LINE L2 1909 2744 -570 708 291 126 47 chr5 93074255 93074619 -110010913 + L2 LINE L2 2921 3313 0 201 176 0 0 chr5 93074804 93074838 -110010694 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 490 288 88 32 chr5 93075673 93076076 -110009456 + LTR16A LTR ERVL 1 444 -6 535 216 347 5 chr5 93076133 93076323 -110009209 + MER34 LTR ERV1 11 265 -277 687 258 79 11 chr5 93076366 93076556 -110008976 + MER34 LTR ERV1 339 541 -1 676 172 6 6 chr5 93077320 93077500 -110008032 + (TA)n Simple_repeat Simple_repeat 1 180 0 274 160 20 0 chr5 93077658 93077708 -110007824 + MER3 DNA MER1_type 39 89 -120 * 323 73 12 158 chr5 93077672 93077754 -110007778 - MER3 DNA MER1_type -5 204 135 322 191 0 0 chr5 93077798 93077861 -110007671 + MLT1A1 LTR MaLR 328 390 0 648 272 67 5 chr5 93078919 93079114 -110006418 - MIR SINE MIR -51 211 5 2453 71 0 7 chr5 93079756 93080065 -110005467 + AluY SINE Alu 1 307 -4 225 154 0 0 chr5 93080193 93080232 -110005300 + (CATA)n Simple_repeat Simple_repeat 1 39 0 28 0 0 0 chr5 93080271 93080299 -110005233 + AT_rich Low_complexity Low_complexity 1 28 0 427 241 175 18 chr5 93080379 93080545 -110004987 - MIR SINE MIR -2 260 69 21 82 0 0 chr5 93080830 93080879 -110004653 + AT_rich Low_complexity Low_complexity 1 49 0 26 50 0 0 chr5 93081115 93081155 -110004377 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5 93081278 93081303 -110004229 + AT_rich Low_complexity Low_complexity 1 25 0 336 330 65 40 chr5 93081592 93081792 -110003740 + MIR SINE MIR 53 257 -5 669 158 17 0 chr5 93082291 93082411 -110003121 - L1PA10 LINE L1 -975 5171 5050 2316 113 20 14 chr5 93082411 93082550 -110002982 + L1PA10 LINE L1 5172 5309 -859 2204 100 13 0 chr5 93082550 93082849 -110002683 + AluY SINE Alu 1 303 -8 2316 113 20 14 chr5 93082849 93083154 -110002378 + L1PA10 LINE L1 5309 5619 -549 4122 71 39 24 chr5 93083155 93083746 -110001786 - LTR14B LTR ERVK -2 606 7 3875 78 33 0 chr5 93083749 93084288 -110001244 + L1PA10 LINE L1 5610 6166 -2 336 309 220 11 chr5 93084303 93084666 -110000866 + L2 LINE L2 1819 2257 -1057 332 274 41 20 chr5 93085239 93085385 -110000147 - HAL1 LINE L1 -342 2165 2017 183 80 0 0 chr5 93085391 93085416 -110000116 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1471 236 44 45 chr5 93085643 93086148 -109999384 - MLT1D LTR MaLR -1 504 1 354 80 0 0 chr5 93086564 93086614 -109998918 + (CA)n Simple_repeat Simple_repeat 2 51 0 2380 97 7 0 chr5 93086648 93086957 -109998575 + AluSp SINE Alu 1 311 -2 2411 97 0 0 chr5 93087947 93088257 -109997275 - AluY SINE Alu -1 310 1 21 100 0 0 chr5 93089278 93089348 -109996184 + AT_rich Low_complexity Low_complexity 1 70 0 471 18 0 0 chr5 93089470 93089526 -109996006 + (TG)n Simple_repeat Simple_repeat 1 56 0 308 283 6 31 chr5 93089574 93089733 -109995799 - L1ME4a LINE L1 -205 5916 5762 2082 117 0 3 chr5 93091255 93091601 -109993931 + AluSg SINE Alu 1 345 0 293 307 7 4 chr5 93092489 93092639 -109992893 + MIR SINE MIR 49 262 0 286 352 117 22 chr5 93093555 93093785 -109991747 - L2 LINE L2 -464 2850 2599 21 0 0 0 chr5 93094463 93094484 -109991048 + AT_rich Low_complexity Low_complexity 1 21 0 240 143 0 0 chr5 93094946 93094988 -109990544 + (T)n Simple_repeat Simple_repeat 1 42 0 5413 31 5 1 chr5 93095002 93095648 -109989884 - L1PA3 LINE L1 -1 6154 5507 1078 265 85 11 chr5 93096389 93096826 -109988706 - L1ME3 LINE L1 -3 6159 5691 246 62 0 0 chr5 93096966 93096998 -109988534 + (T)n Simple_repeat Simple_repeat 1 32 0 2069 68 0 51 chr5 93097759 93098106 -109987426 + AluY SINE Alu 2 333 0 251 337 21 0 chr5 93098186 93098281 -109987251 - MIR SINE MIR -73 135 39 233 297 0 40 chr5 93098992 93099066 -109986466 - L2 LINE L2 -4 3268 3198 1835 160 3 7 chr5 93099371 93099664 -109985868 + AluJo SINE Alu 1 292 -20 1258 201 29 29 chr5 93099677 93099879 -109985653 - L1MD2 LINE L1 -27 6332 6128 1483 176 120 0 chr5 93099879 93100146 -109985386 - AluJb SINE Alu -13 299 1 1258 201 29 29 chr5 93100146 93100257 -109985275 - L1MD2 LINE L1 -230 6129 6019 312 133 100 0 chr5 93100259 93100319 -109985213 - MLT1A1 LTR MaLR 0 374 309 36 40 0 0 chr5 93100323 93100373 -109985159 + AT_rich Low_complexity Low_complexity 1 50 0 1640 193 19 6 chr5 93100373 93100684 -109984848 - MLT1A1 LTR MaLR -50 315 1 2447 166 85 57 chr5 93100685 93101464 -109984068 - L1MD1 LINE L1 -225 6017 5236 629 219 29 85 chr5 93101465 93101786 -109983746 + MLT1A1 LTR MaLR 1 293 -81 323 24 0 0 chr5 93101886 93101928 -109983604 + L1P LINE L1 2728 2769 -3377 * 14109 83 8 12 chr5 93101920 93104036 -109981496 - L1P LINE L1 -3215 2931 826 916 209 134 81 chr5 93104674 93105195 -109980337 + MLT1H LTR MaLR 1 549 0 280 280 17 59 chr5 93105859 93105977 -109979555 + MER77 LTR ERV1 66 178 -427 494 284 84 42 chr5 93105994 93106304 -109979228 + MER21B LTR ERV1 126 448 -415 240 204 43 75 chr5 93107165 93107258 -109978274 + MLT1I LTR MaLR 318 407 -2 308 308 60 8 chr5 93107422 93107539 -109977993 + L3 LINE CR1 1454 1576 -1 543 242 39 0 chr5 93108149 93108277 -109977255 + MIR SINE MIR 65 197 -65 270 304 188 0 chr5 93109065 93109177 -109976355 - MIR SINE MIR -108 154 22 189 0 0 0 chr5 93110083 93110104 -109975428 + (TC)n Simple_repeat Simple_repeat 2 22 0 766 59 0 0 chr5 93110107 93110208 -109975324 - L1PA8 LINE L1 -2 6170 6070 2216 102 0 0 chr5 93110851 93111168 -109974364 + AluSx SINE Alu 1 317 0 7264 35 15 1 chr5 93111791 93113478 -109972054 + L1PA3 LINE L1 4480 6155 0 1970 125 43 0 chr5 93113671 93113950 -109971582 - AluSg SINE Alu -19 291 1 1720 164 24 17 chr5 93115560 93115874 -109969658 + AluJo SINE Alu 1 312 0 186 43 0 0 chr5 93115932 93115955 -109969577 + (A)n Simple_repeat Simple_repeat 1 23 0 359 244 0 0 chr5 93116872 93116954 -109968578 + L2 LINE L2 1783 1864 -1450 1722 128 142 0 chr5 93116973 93117317 -109968215 - L1MB3 LINE L1 -1 6182 5790 288 224 201 8 chr5 93117493 93117627 -109967905 - MER3 DNA MER1_type -19 190 31 15159 55 71 17 chr5 93117758 93120110 -109965422 - L1P LINE L1 -3667 2479 1 4259 35 2 2 chr5 93120465 93120982 -109964550 - L1PA4 LINE L1 -2 6153 5637 278 299 37 52 chr5 93121082 93121216 -109964316 - MIR SINE MIR -49 213 82 2218 106 12 26 chr5 93121847 93122188 -109963344 - MER1B DNA MER1_type 0 337 2 893 233 20 76 chr5 93122304 93122660 -109962872 + MER46C DNA MER2_type 2 337 -1 2007 128 10 7 chr5 93123114 93123411 -109962121 + AluSc SINE Alu 3 300 -9 2226 88 35 0 chr5 93123783 93124068 -109961464 + AluSx SINE Alu 1 295 -17 1831 163 0 14 chr5 93125055 93125349 -109960183 + AluJo SINE Alu 1 290 -22 660 211 7 97 chr5 93125837 93126136 -109959396 - L1MEc LINE L1 -1695 4731 4460 9129 172 8 17 chr5 93126147 93129169 -109956363 - L1PB1 LINE L1 -7 6860 3860 4838 150 46 1 chr5 93130098 93131668 -109953864 - L1PB1 LINE L1 -2972 3890 2253 1214 141 0 29 chr5 93133234 93133440 -109952092 - AluJb SINE Alu -20 292 93 496 204 238 14 chr5 93134234 93134381 -109951151 - MIR SINE MIR -82 180 1 508 248 147 19 chr5 93134427 93134584 -109950948 + MER5A DNA MER1_type 10 186 -3 1411 218 79 20 chr5 93134702 93135055 -109950477 + MLT1A2 LTR MaLR 1 374 0 4592 202 48 9 chr5 93135203 93136981 -109948551 - L1MEc LINE L1 -2522 3904 2054 618 251 17 11 chr5 93137731 93137906 -109947626 - MER5B DNA MER1_type 0 178 3 442 213 253 13 chr5 93138022 93138172 -109947360 + MIR SINE MIR 69 254 -8 317 278 136 90 chr5 93138602 93138969 -109946563 - L1M2 LINE L1 -5827 1022 639 3599 25 23 5 chr5 93139503 93139943 -109945589 - LTR7 LTR ERV1 -2 448 1 1017 159 6 11 chr5 93140508 93140690 -109944842 + MER20 DNA MER1_type 1 181 -38 1179 98 7 0 chr5 93140690 93140843 -109944689 + AluSx SINE Alu 1 154 -158 243 264 0 0 chr5 93140914 93140967 -109944565 - L2 LINE L2 0 3272 3220 192 135 0 0 chr5 93141334 93141371 -109944161 + (T)n Simple_repeat Simple_repeat 1 37 0 314 303 56 12 chr5 93142074 93142236 -109943296 + L2 LINE L2 3105 3273 -40 419 303 137 73 chr5 93146885 93147768 -109937764 - L1M2 LINE L1 -5734 1115 451 2505 67 0 19 chr5 93148587 93148901 -109936631 - AluSg SINE Alu -2 308 1 216 327 29 0 chr5 93155160 93155264 -109930268 + GA-rich Low_complexity Low_complexity 2 108 0 243 0 0 0 chr5 93157274 93157301 -109928231 + (TG)n Simple_repeat Simple_repeat 2 28 0 2887 89 5 0 chr5 93158940 93159343 -109926189 + L1PA7 LINE L1 5750 6154 0 236 275 181 58 chr5 93159506 93159644 -109925888 + MER5A DNA MER1_type 29 183 -6 482 265 90 27 chr5 93160050 93160273 -109925259 - L1M4 LINE L1 -2107 4039 3803 409 313 47 0 chr5 93160279 93160490 -109925042 - L1MEc LINE L1 -4582 2025 1805 8727 222 74 12 chr5 93160564 93161229 -109924303 + L1MB3 LINE L1 13 635 -5747 251 54 27 0 chr5 93161229 93161266 -109924266 + (TAA)n Simple_repeat Simple_repeat 2 39 0 8727 222 74 12 chr5 93161266 93164217 -109921315 + L1MB3 LINE L1 635 3857 -2525 4026 200 15 26 chr5 93164222 93165102 -109920430 + L1MB3 LINE L1 5287 6161 -258 1591 198 51 46 chr5 93165102 93165496 -109920036 + MSTD LTR MaLR 1 396 0 4026 200 15 26 chr5 93165496 93165750 -109919782 + L1MB3 LINE L1 6161 6416 -3 238 285 35 21 chr5 93165761 93165905 -109919627 - L1MEc LINE L1 -4882 1544 1399 635 317 78 83 chr5 93166043 93166191 -109919341 - L1MEc LINE L1 -4968 1448 1301 1374 176 19 7 chr5 93166191 93166498 -109919034 - L1MA9 LINE L1 0 6312 6002 635 317 78 83 chr5 93166498 93167058 -109918474 - L1MEc LINE L1 -5115 1301 744 22 35 0 0 chr5 93168325 93168354 -109917178 + AT_rich Low_complexity Low_complexity 1 29 0 5573 32 0 0 chr5 93168737 93169353 -109916179 - SVA Other Other 0 1386 771 24 53 0 0 chr5 93169572 93169610 -109915922 + AT_rich Low_complexity Low_complexity 1 38 0 284 314 92 38 chr5 93170114 93170285 -109915247 + MIR SINE MIR 51 231 -31 903 135 58 13 chr5 93170285 93170441 -109915091 + MER5B DNA MER1_type 1 163 -15 2113 144 0 3 chr5 93170545 93170857 -109914675 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr5 93171319 93171341 -109914191 + AT_rich Low_complexity Low_complexity 1 22 0 34 24 0 0 chr5 93171526 93171567 -109913965 + AT_rich Low_complexity Low_complexity 1 41 0 281 329 87 20 chr5 93171909 93172058 -109913474 - MIR3 SINE MIR -6 202 44 22 35 0 0 chr5 93172198 93172227 -109913305 + AT_rich Low_complexity Low_complexity 1 29 0 550 92 0 0 chr5 93172236 93172312 -109913220 + U3 snRNA snRNA 1 76 -141 20902 81 127 0 chr5 93172312 93175822 -109909710 + L1P2 LINE L1 1558 5529 -625 2372 33 40 13 chr5 93175822 93176122 -109909410 + AluY SINE Alu 1 308 -3 276 30 0 0 chr5 93176126 93176159 -109909373 + (A)n Simple_repeat Simple_repeat 1 33 0 2655 100 5 12 chr5 93177765 93178164 -109907368 + THE1C-int LTR MaLR 1184 1579 -1 2527 103 19 5 chr5 93178165 93178535 -109906997 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr5 93178550 93178578 -109906954 + AT_rich Low_complexity Low_complexity 1 28 0 1749 181 3 14 chr5 93178931 93179224 -109906308 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 93180144 93180165 -109905367 + AT_rich Low_complexity Low_complexity 1 21 0 2091 105 24 14 chr5 93180912 93181208 -109904324 - AluSq SINE Alu -14 299 1 1577 209 16 38 chr5 93182602 93182975 -109902557 - MLT1A1 LTR MaLR 0 365 1 514 376 72 20 chr5 93183059 93183546 -109901986 - L2 LINE L2 -399 2915 2404 248 276 48 67 chr5 93183721 93183826 -109901706 - MIR SINE MIR -122 140 38 461 327 31 31 chr5 93183850 93184009 -109901523 + MER91A DNA MER1_type 12 170 -26 206 314 95 48 chr5 93184008 93184113 -109901419 + MER91A DNA MER1_type 86 195 -1 * 240 135 19 58 chr5 93185081 93185133 -109900399 + MLT1H LTR MaLR 112 161 -388 222 184 0 0 chr5 93185313 93185351 -109900181 + CT-rich Low_complexity Low_complexity 4 41 0 632 237 18 24 chr5 93185648 93185817 -109899715 + MER45A DNA AcHobo 1 168 -10 649 282 59 23 chr5 93185966 93186189 -109899343 + MIR SINE MIR 18 246 -16 669 238 132 0 chr5 93187107 93187296 -109898236 + MIR SINE MIR 13 226 -36 288 0 0 0 chr5 93187352 93187384 -109898148 + (TC)n Simple_repeat Simple_repeat 2 33 0 247 134 61 0 chr5 93187384 93187466 -109898066 + (TA)n Simple_repeat Simple_repeat 2 88 0 182 370 45 39 chr5 93187612 93187766 -109897766 + L2 LINE L2 2788 2942 -372 409 246 87 0 chr5 93188129 93188255 -109897277 - L2 LINE L2 -9 3304 3168 2792 174 16 16 chr5 93188830 93189181 -109896351 + L1PB4 LINE L1 5605 5958 -198 312 69 328 0 chr5 93189181 93189239 -109896293 - MADE1 DNA Mariner -3 77 1 2792 174 16 16 chr5 93189239 93189439 -109896093 + L1PB4 LINE L1 5957 6156 0 479 203 62 8 chr5 93191184 93191312 -109894220 + MER3 DNA MER1_type 36 123 -86 1281 216 22 3 chr5 93191317 93191679 -109893853 + MER3 DNA MER1_type 2243 2611 0 1013 49 0 56 chr5 93192986 93193130 -109892402 - AluSg/x SINE Alu -2 310 175 699 193 93 0 chr5 93193130 93193280 -109892252 - MER58B DNA MER1_type -10 331 168 21 36 0 0 chr5 93193357 93193385 -109892147 + AT_rich Low_complexity Low_complexity 1 28 0 676 312 93 41 chr5 93193527 93193870 -109891662 + MLT1K LTR MaLR 204 564 -24 601 322 52 15 chr5 93195025 93195292 -109890240 - LTR16C LTR ERVL -82 409 133 22 0 0 0 chr5 93195437 93195459 -109890073 + AT_rich Low_complexity Low_complexity 1 22 0 302 260 73 0 chr5 93196644 93196767 -109888765 - L1ME4a LINE L1 -223 5898 5767 873 300 4 4 chr5 93196869 93197099 -109888433 - MIR SINE MIR -26 236 7 288 342 100 0 chr5 93197191 93197381 -109888151 - L1ME4a LINE L1 -2237 5571 5363 1195 199 31 37 chr5 93197726 93198052 -109887480 - MER33 DNA MER1_type 0 324 1 196 327 0 0 chr5 93198326 93198381 -109887151 + MIR SINE MIR 49 103 -105 262 264 154 0 chr5 93198481 93198572 -109886960 + MIR SINE MIR 79 183 -79 311 232 0 61 chr5 93198641 93198723 -109886809 + MIR3 SINE MIR 123 199 -9 4956 154 24 20 chr5 93198777 93199777 -109885755 + L1PB4 LINE L1 5152 6155 -1 21 57 0 0 chr5 93199818 93199853 -109885679 + AT_rich Low_complexity Low_complexity 1 35 0 210 349 0 12 chr5 93200317 93200400 -109885132 + MIR SINE MIR 64 145 -117 2202 115 0 0 chr5 93201352 93201647 -109883885 + AluSx SINE Alu 1 295 -17 23 33 0 0 chr5 93201651 93201681 -109883851 + AT_rich Low_complexity Low_complexity 1 30 0 3491 127 3 6 chr5 93201892 93202947 -109882585 - L1P3 LINE L1 -4428 2033 784 1263 189 108 29 chr5 93203365 93203708 -109881824 - MLT1D LTR MaLR -135 370 1 182 152 61 0 chr5 93203811 93203844 -109881688 + L2 LINE L2 1993 2027 -1287 264 59 0 0 chr5 93203859 93203893 -109881639 + (T)n Simple_repeat Simple_repeat 1 34 0 1971 141 21 0 chr5 93203911 93204201 -109881331 - AluSq SINE Alu -16 297 2 2077 139 3 0 chr5 93204584 93204885 -109880647 + AluSx SINE Alu 1 302 -10 367 309 74 36 chr5 93205358 93205570 -109879962 - MARNA DNA Mariner -160 426 195 2418 76 0 22 chr5 93205570 93205887 -109879645 - AluY SINE Alu -1 310 1 367 309 74 36 chr5 93205887 93206010 -109879522 - MARNA DNA Mariner -391 195 78 306 0 0 0 chr5 93208367 93208401 -109877131 + (CA)n Simple_repeat Simple_repeat 2 35 0 22 70 0 0 chr5 93210177 93210220 -109875312 + AT_rich Low_complexity Low_complexity 1 43 0 1836 86 37 0 chr5 93210319 93210562 -109874970 + AluSc SINE Alu 44 295 -14 272 256 70 23 chr5 93211367 93211453 -109874079 - MIR SINE MIR -116 146 57 360 223 47 108 chr5 93211568 93211716 -109873816 + MLT1E2 LTR MaLR 1 139 -487 32 57 0 0 chr5 93211763 93211816 -109873716 + AT_rich Low_complexity Low_complexity 1 53 0 523 327 65 20 chr5 93212910 93213158 -109872374 - MIR SINE MIR 0 262 4 28 0 0 0 chr5 93213221 93213249 -109872283 + AT_rich Low_complexity Low_complexity 1 28 0 191 222 0 28 chr5 93213293 93213329 -109872203 - L2 LINE L2 -36 3236 3202 279 175 0 0 chr5 93213336 93213393 -109872139 + (CACCAT)n Simple_repeat Simple_repeat 6 62 0 383 260 80 0 chr5 93213409 93213509 -109872023 - MIR SINE MIR -37 225 118 246 185 15 15 chr5 93214002 93214067 -109871465 + L1M4 LINE L1 3713 3777 -2369 537 101 0 38 chr5 93214378 93214457 -109871075 - AluJ/FRAM SINE Alu -19 293 218 1804 156 0 7 chr5 93214600 93214888 -109870644 + AluSx SINE Alu 1 286 -26 345 306 49 21 chr5 93214919 93215063 -109870469 + L2 LINE L2 3162 3309 -4 945 148 0 13 chr5 93215069 93215218 -109870314 + L1MB3 LINE L1 57 203 -6225 3147 183 33 21 chr5 93215264 93216306 -109869226 + L1MB3 LINE L1 4966 6015 -448 314 205 12 0 chr5 93216306 93216389 -109869143 + (CATATA)n Simple_repeat Simple_repeat 3 86 0 1831 169 16 40 chr5 93216489 93216862 -109868670 + L1MB3 LINE L1 6092 6455 -8 207 0 0 0 chr5 93218003 93218026 -109867506 + (CATG)n Simple_repeat Simple_repeat 1 23 0 595 272 22 103 chr5 93218036 93218348 -109867184 - L2 LINE L2 -12 3301 3015 333 253 13 0 chr5 93218391 93218470 -109867062 + L1MC4 LINE L1 6624 6703 -1339 306 211 42 0 chr5 93218446 93218517 -109867015 + L1M4c LINE L1 1995 2068 -4358 * 21 0 0 0 chr5 93218521 93218542 -109866990 + AT_rich Low_complexity Low_complexity 1 21 0 271 256 133 0 chr5 93218972 93219062 -109866470 + L2 LINE L2 871 972 -2342 205 277 121 0 chr5 93219261 93219344 -109866188 + L3b LINE CR1 1104 1196 -387 1353 308 87 15 chr5 93220060 93220657 -109864875 + L2 LINE L2 358 997 -2317 182 343 148 28 chr5 93221389 93221497 -109864035 + MIR SINE MIR 34 154 -108 1602 128 52 115 chr5 93221715 93222072 -109863460 + THE1C LTR MaLR 1 332 -43 2290 108 0 0 chr5 93222072 93222377 -109863155 - AluSc SINE Alu -4 305 1 1602 128 52 115 chr5 93222377 93222419 -109863113 + THE1C LTR MaLR 332 375 0 418 271 313 0 chr5 93223161 93223353 -109862179 + MIR SINE MIR 3 254 -8 2208 42 67 7 chr5 93224152 93224435 -109861097 + AluY SINE Alu 1 300 -11 22 35 0 0 chr5 93224838 93224867 -109860665 + AT_rich Low_complexity Low_complexity 1 29 0 225 296 0 0 chr5 93226121 93226175 -109859357 + GA-rich Low_complexity Low_complexity 4 57 0 24 0 0 0 chr5 93228039 93228063 -109857469 + AT_rich Low_complexity Low_complexity 1 24 0 218 104 21 42 chr5 93230558 93230606 -109854926 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 401 310 111 84 chr5 93230858 93231406 -109854126 + L1M2 LINE L1 841 1403 -5446 34 24 0 0 chr5 93231771 93231812 -109853720 + GC_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 93232020 93232051 -109853481 + GC_rich Low_complexity Low_complexity 1 31 0 284 148 16 0 chr5 93232069 93232130 -109853402 + CT-rich Low_complexity Low_complexity 1 62 0 417 123 0 0 chr5 93232923 93232988 -109852544 + (T)n Simple_repeat Simple_repeat 1 65 0 192 77 0 0 chr5 93233308 93233334 -109852198 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 30 0 0 0 chr5 93234277 93234307 -109851225 + AT_rich Low_complexity Low_complexity 1 30 0 498 267 20 14 chr5 93234528 93234674 -109850858 - MER103 DNA DNA -3 163 17 219 182 0 23 chr5 93234769 93234813 -109850719 + A-rich Low_complexity Low_complexity 3 45 0 1588 172 29 61 chr5 93234837 93235214 -109850318 + MLT1A1 LTR MaLR 1 365 0 279 290 129 57 chr5 93235278 93235471 -109850061 + MIR SINE MIR 30 236 -26 629 242 81 0 chr5 93235751 93235900 -109849632 + MLT1E2 LTR MaLR 466 626 0 382 331 24 0 chr5 93235906 93236033 -109849499 - MIR SINE MIR -105 157 28 531 279 43 67 chr5 93236047 93236301 -109849231 - MIR SINE MIR -8 254 7 186 341 34 0 chr5 93236501 93236589 -109848943 + L2 LINE L2 2879 2969 -303 275 238 0 16 chr5 93237253 93237316 -109848216 + (TATG)n Simple_repeat Simple_repeat 3 64 0 873 293 110 8 chr5 93237438 93237837 -109847695 - L1MC/D LINE L1 -2055 5753 5314 335 313 104 34 chr5 93238216 93238513 -109847019 - L1MC/D LINE L1 -1217 4929 4612 367 291 51 58 chr5 93238567 93238686 -109846846 - L1MC/D LINE L1 -1704 4442 4324 333 100 0 0 chr5 93238686 93238736 -109846796 + (TG)n Simple_repeat Simple_repeat 1 50 0 367 291 51 58 chr5 93238736 93238964 -109846568 - L1MC/D LINE L1 -1822 4324 4084 33 43 0 0 chr5 93239972 93240019 -109845513 + AT_rich Low_complexity Low_complexity 1 47 0 453 156 229 9 chr5 93240973 93241082 -109844450 - FLAM_C SINE Alu -10 133 1 1854 157 13 0 chr5 93241347 93241652 -109843880 + AluY SINE Alu 1 309 -2 27 62 0 0 chr5 93242371 93242419 -109843113 + AT_rich Low_complexity Low_complexity 1 48 0 2352 157 65 0 chr5 93242944 93243346 -109842186 - MSTC LTR MaLR 0 428 1 1940 94 0 0 chr5 93244191 93244447 -109841085 + AluY SINE Alu 37 292 -19 517 263 71 67 chr5 93245419 93245659 -109839873 - MER102a DNA MER1_type -16 314 74 499 283 7 0 chr5 93245987 93246125 -109839407 + L1ME4a LINE L1 5521 5659 -462 324 262 74 27 chr5 93246215 93246364 -109839168 + L1ME4a LINE L1 5708 5863 -258 343 317 76 80 chr5 93246665 93247085 -109838447 - L1MC/D LINE L1 -2041 5767 5348 1776 158 17 13 chr5 93247085 93247383 -109838149 - AluJb SINE Alu -13 299 1 343 317 76 80 chr5 93247383 93247438 -109838094 - L1MC/D LINE L1 -2460 5348 5294 25 31 0 0 chr5 93247517 93247549 -109837983 + AT_rich Low_complexity Low_complexity 1 32 0 207 330 93 17 chr5 93248331 93248449 -109837083 - L2 LINE L2 -4 3268 3142 348 305 52 60 chr5 93248791 93249060 -109836472 - MLT1K LTR MaLR -11 577 311 407 305 153 26 chr5 93249547 93249779 -109835753 + L1ME4a LINE L1 5570 5852 -269 1837 151 0 7 chr5 93249779 93250070 -109835462 - AluSx SINE Alu -3 309 21 407 305 153 26 chr5 93250070 93250145 -109835387 + L1ME4a LINE L1 5852 5916 -205 26 30 0 0 chr5 93250276 93250309 -109835223 + AT_rich Low_complexity Low_complexity 1 33 0 532 337 53 5 chr5 93250948 93251138 -109834394 - MIR3 SINE MIR -8 200 2 342 260 70 0 chr5 93251267 93251367 -109834165 + MIR SINE MIR 74 180 -82 2145 138 0 3 chr5 93251773 93252085 -109833447 - AluSx SINE Alu -1 311 1 332 315 102 0 chr5 93252615 93252742 -109832790 + L3 LINE CR1 1331 1470 -107 21 95 0 0 chr5 93253035 93253098 -109832434 + AT_rich Low_complexity Low_complexity 1 63 0 38 51 0 0 chr5 93253396 93253455 -109832077 + AT_rich Low_complexity Low_complexity 1 59 0 194 337 0 36 chr5 93253598 93253681 -109831851 + MIR3 SINE MIR 83 162 -46 604 288 119 48 chr5 93254237 93254709 -109830823 + MLT1H LTR MaLR 41 590 -5 218 269 0 108 chr5 93255492 93255585 -109829947 + L2 LINE L2 3188 3270 -2 240 187 0 77 chr5 93256424 93256515 -109829017 + A-rich Low_complexity Low_complexity 2 85 0 2188 106 0 10 chr5 93256571 93256874 -109828658 + AluSq SINE Alu 1 300 -13 23 68 0 0 chr5 93256924 93256968 -109828564 + AT_rich Low_complexity Low_complexity 1 44 0 306 206 0 16 chr5 93257389 93257452 -109828080 + L1MC4 LINE L1 7981 8042 0 572 142 19 0 chr5 93258538 93258644 -109826888 + CT-rich Low_complexity Low_complexity 4 111 0 1396 196 15 7 chr5 93258656 93258926 -109826606 - AluJo SINE Alu -36 276 5 316 235 76 76 chr5 93259118 93259237 -109826295 + MLT1I LTR MaLR 281 531 -18 1731 234 42 40 chr5 93259237 93259733 -109825799 + MLT1D LTR MaLR 1 497 -8 2054 104 0 4 chr5 93260084 93260396 -109825136 + AluSc SINE Alu 1 311 0 1723 236 20 15 chr5 93260735 93261133 -109824399 + MLT2D LTR ERVL 7 406 -8 1040 304 84 41 chr5 93261264 93262017 -109823515 + HAL1 LINE L1 446 1230 -1277 3652 121 28 20 chr5 93262024 93262660 -109822872 - L1MA3 LINE L1 -10 6295 5655 6463 229 78 12 chr5 93262663 93264424 -109821108 - L1PA3 LINE L1 0 6155 4135 1910 147 0 7 chr5 93264424 93264717 -109820815 + AluJb SINE Alu 1 291 -21 6463 229 78 12 chr5 93264717 93265724 -109819808 - L1PA3 LINE L1 -2020 4135 3196 * 6734 41 30 1 chr5 93265720 93266549 -109818983 - L1PA5 LINE L1 -1 6153 5301 1123 170 36 22 chr5 93266574 93266798 -109818734 + L1M1 LINE L1 924 1150 -6415 * 3401 194 14 49 chr5 93266792 93267492 -109818040 - L1M1 LINE L1 -6788 777 102 210 37 0 0 chr5 93267495 93267522 -109818010 + (T)n Simple_repeat Simple_repeat 1 27 0 721 293 51 33 chr5 93267641 93268092 -109817440 + HAL1 LINE L1 1261 1719 -788 2965 217 11 81 chr5 93268197 93268953 -109816579 - L1M1 LINE L1 -6851 714 12 1990 280 64 50 chr5 93268952 93270033 -109815499 + HAL1 LINE L1 1217 2320 -187 * 2553 55 0 3 chr5 93270033 93270345 -109815187 + AluY SINE Alu 1 311 0 1990 280 64 50 chr5 93270345 93270536 -109814996 + HAL1 LINE L1 2320 2507 0 185 229 21 0 chr5 93270659 93270707 -109814825 - L2 LINE L2 0 3313 3265 27 62 0 0 chr5 93271490 93271538 -109813994 + AT_rich Low_complexity Low_complexity 1 48 0 826 249 17 0 chr5 93271797 93271978 -109813554 - MER5A DNA MER1_type 0 189 6 455 255 9 9 chr5 93272088 93272194 -109813338 - MER5A DNA MER1_type -83 106 1 1385 185 29 13 chr5 93272494 93272808 -109812724 - MER33 DNA MER1_type -1 323 5 194 377 85 0 chr5 93273203 93273309 -109812223 - L2 LINE L2 -6 3307 3193 22 56 0 0 chr5 93273560 93273596 -109811936 + AT_rich Low_complexity Low_complexity 1 36 0 549 263 43 47 chr5 93274050 93274305 -109811227 + MER34B LTR ERV1 293 546 -19 1742 160 0 0 chr5 93274663 93274931 -109810601 + AluSx SINE Alu 1 268 -44 207 0 0 0 chr5 93274939 93274962 -109810570 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 22 56 0 0 chr5 93275071 93275107 -109810425 + AT_rich Low_complexity Low_complexity 1 36 0 401 193 23 11 chr5 93275266 93275354 -109810178 - MER34C LTR ERV1 -27 558 470 326 93 0 0 chr5 93275555 93275598 -109809934 - LTR40b LTR ERVL -231 231 189 625 103 0 0 chr5 93275599 93275686 -109809846 - L1PA16 LINE L1 -43 6123 6037 5604 187 55 8 chr5 93275826 93276827 -109808705 - L1PBb LINE L1 -4205 1999 1047 7139 48 6 0 chr5 93276827 93278069 -109807463 - L1PA6 LINE L1 -4 6150 4904 5604 187 55 8 chr5 93278069 93279008 -109806524 - L1PBb LINE L1 -5157 1047 5 3240 303 46 31 chr5 93279030 93280609 -109804923 - L1PBa LINE L1 -5259 1604 3 778 173 8 0 chr5 93280692 93280819 -109804713 - FLAM_A SINE Alu -5 128 1 22 0 0 0 chr5 93280825 93280847 -109804685 + AT_rich Low_complexity Low_complexity 1 22 0 237 299 65 9 chr5 93282947 93283054 -109802478 + L2 LINE L2 3155 3267 -46 1582 214 3 3 chr5 93283557 93283843 -109801689 + MLT1A1 LTR MaLR 1 286 -79 4477 173 65 49 chr5 93283843 93284897 -109800635 + MER11C LTR ERVK 1 1071 0 440 200 0 0 chr5 93284897 93284982 -109800550 + MLT1A1 LTR MaLR 281 365 0 21 36 0 0 chr5 93284988 93285016 -109800516 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 93285058 93285083 -109800449 + AT_rich Low_complexity Low_complexity 1 25 0 35 24 0 0 chr5 93285876 93285918 -109799614 + AT_rich Low_complexity Low_complexity 1 42 0 472 196 114 76 chr5 93286029 93286213 -109799319 + L1MC2 LINE L1 37 164 -5881 6351 129 11 46 chr5 93286262 93287383 -109798149 - Tigger1 DNA MER2_type 0 2418 1338 2823 113 18 2 chr5 93287383 93287817 -109797715 - Tigger1 DNA MER2_type -1390 1028 588 1108 199 14 5 chr5 93287810 93288021 -109797511 + Tigger1 DNA MER2_type 179 391 -2027 * 736 182 30 0 chr5 93288025 93288157 -109797375 - Tigger1 DNA MER2_type 0 2418 2283 1576 234 20 42 chr5 93288185 93288639 -109796893 + L1MC2 LINE L1 399 842 -5203 1264 192 17 7 chr5 93288638 93288929 -109796603 + L1MC2 LINE L1 1845 2138 -4426 * 1277 227 59 15 chr5 93288961 93289351 -109796181 + L1MC2 LINE L1 2229 2636 -3928 * 5990 237 44 19 chr5 93289344 93292662 -109792870 + L1MC2 LINE L1 3310 6738 -24 2272 106 0 3 chr5 93292693 93293004 -109792528 + AluSq SINE Alu 1 310 -3 478 29 0 29 chr5 93293673 93293743 -109791789 + (GA)n Simple_repeat Simple_repeat 2 69 0 2104 93 7 0 chr5 93294412 93294692 -109790840 - AluSg SINE Alu -5 305 24 325 304 65 22 chr5 93296225 93296374 -109789158 - MIR SINE MIR -72 190 38 330 269 45 106 chr5 93297439 93297703 -109787829 + L2 LINE L2 3066 3313 0 386 250 145 24 chr5 93299124 93299248 -109786284 + L3b LINE CR1 1343 1481 -102 1651 305 24 16 chr5 93299709 93300289 -109785243 + L1MA7 LINE L1 11 618 -4732 2147 65 0 11 chr5 93300313 93300590 -109784942 + AluY SINE Alu 2 275 -36 2565 283 52 50 chr5 93300738 93303067 -109782465 + L1MA7 LINE L1 684 2654 -3696 2291 162 13 0 chr5 93303067 93303463 -109782069 - HSMAR2 DNA Mariner -1 1301 901 1613 150 14 95 chr5 93303489 93303856 -109781676 - L1MC3 LINE L1 -7 7778 7442 1107 188 19 0 chr5 93303893 93304101 -109781431 - L1PA16 LINE L1 -20 6146 5935 533 96 0 0 chr5 93304101 93304174 -109781358 - HSMAR2 DNA Mariner -1163 139 67 292 169 46 0 chr5 93304227 93304292 -109781240 - HSMAR2 DNA Mariner -1230 72 5 12134 204 25 18 chr5 93304294 93306237 -109779295 + L1MA7 LINE L1 2653 4704 -1791 1561 63 5 27 chr5 93306237 93306460 -109779072 + L1PA6 LINE L1 5935 6152 -2 12134 204 25 18 chr5 93306460 93308259 -109777273 + L1MA7 LINE L1 4704 6489 -6 1620 187 14 7 chr5 93308347 93308641 -109776891 - AluJb SINE Alu -16 296 1 514 306 61 58 chr5 93308773 93309052 -109776480 - MLT1J LTR MaLR -89 422 140 2329 164 33 21 chr5 93309052 93309479 -109776053 - MSTB1 LTR MaLR 0 432 1 514 306 61 58 chr5 93309479 93309595 -109775937 - MLT1J LTR MaLR -371 140 26 29 47 0 0 chr5 93310005 93310048 -109775484 + AT_rich Low_complexity Low_complexity 1 43 0 25 99 0 0 chr5 93311436 93311517 -109774015 + AT_rich Low_complexity Low_complexity 1 81 0 326 220 64 43 chr5 93311887 93312028 -109773504 + L1ME4a LINE L1 5974 6117 -4 224 267 86 67 chr5 93312167 93312272 -109773260 - L2 LINE L2 -5 3267 3161 363 292 22 29 chr5 93312488 93312625 -109772907 + L3 LINE CR1 1190 1325 -252 294 284 49 0 chr5 93313845 93313926 -109771606 - L2 LINE L2 -4 3309 3225 1505 326 105 9 chr5 93313967 93314242 -109771290 - L2 LINE L2 -1818 1496 1249 2202 110 0 0 chr5 93314242 93314552 -109770980 - AluSx SINE Alu -2 310 1 1505 326 105 9 chr5 93314552 93315022 -109770510 - L2 LINE L2 -2065 1249 680 310 395 17 17 chr5 93317382 93317554 -109767978 - MIR3 SINE MIR -21 187 16 1340 214 120 40 chr5 93317633 93318067 -109767465 - MLT1D LTR MaLR 0 626 23 891 224 58 89 chr5 93318356 93318674 -109766858 + MLT2D LTR ERVL 92 399 -65 194 0 39 0 chr5 93318674 93318700 -109766832 + (TC)n Simple_repeat Simple_repeat 2 28 0 891 224 58 89 chr5 93318700 93318742 -109766790 + MLT2D LTR ERVL 399 441 -23 250 64 85 64 chr5 93318758 93318805 -109766727 + MLT2D LTR ERVL 367 414 0 252 130 0 0 chr5 93319764 93319810 -109765722 + (T)n Simple_repeat Simple_repeat 1 46 0 7807 10 11 0 chr5 93319814 93320916 -109764616 - L1PA2 LINE L1 -4 6151 5046 262 301 10 78 chr5 93321806 93321909 -109763623 - MIR SINE MIR -92 116 21 218 317 29 29 chr5 93323140 93323244 -109762288 - L2 LINE L2 -273 2999 2896 2315 146 19 3 chr5 93323244 93323607 -109761925 - THE1C LTR MaLR 0 375 7 302 309 129 71 chr5 93323759 93324138 -109761394 - L2 LINE L2 -565 2749 2349 204 152 30 30 chr5 93326723 93326789 -109758743 + (TATAA)n Simple_repeat Simple_repeat 5 70 0 231 167 0 74 chr5 93326921 93326975 -109758557 + L2 LINE L2 3223 3272 0 217 196 0 22 chr5 93327852 93327898 -109757634 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1732 77 158 0 chr5 93328630 93328890 -109756642 + AluY SINE Alu 1 301 0 22 0 0 0 chr5 93329278 93329300 -109756232 + AT_rich Low_complexity Low_complexity 1 22 0 410 322 60 0 chr5 93329361 93329510 -109756022 + MIR SINE MIR 45 202 -60 235 0 0 54 chr5 93330062 93330099 -109755433 + (CAA)n Simple_repeat Simple_repeat 2 36 0 306 313 31 0 chr5 93330302 93330398 -109755134 - MLT1H LTR MaLR -89 460 362 431 244 164 17 chr5 93331457 93331663 -109753869 - MLT1H LTR MaLR -261 288 1 865 244 134 16 chr5 93331961 93332342 -109753190 + HAL1 LINE L1 1373 1798 -709 198 0 0 0 chr5 93332370 93332392 -109753140 + (GA)n Simple_repeat Simple_repeat 1 22 0 22 70 0 0 chr5 93332962 93333005 -109752527 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr5 93333019 93333047 -109752485 + AT_rich Low_complexity Low_complexity 1 28 0 229 260 40 90 chr5 93333274 93333374 -109752158 + L2 LINE L2 3219 3313 0 22 0 0 0 chr5 93333787 93333809 -109751723 + AT_rich Low_complexity Low_complexity 1 22 0 536 246 16 16 chr5 93334624 93334746 -109750786 - L2 LINE L2 -6 3307 3186 313 319 172 0 chr5 93335145 93335261 -109750271 + L2 LINE L2 3136 3271 -1 827 260 27 18 chr5 93336978 93337201 -109748331 + MER63B DNA MER1_type 4 228 -208 907 244 31 14 chr5 93337210 93337523 -109748009 + MLT1A2 LTR MaLR 8 374 0 281 171 43 0 chr5 93337523 93337592 -109747940 + MER63B DNA MER1_type 225 296 -139 593 303 111 67 chr5 93337651 93338130 -109747402 + L2 LINE L2 2181 2680 -634 560 292 36 44 chr5 93338142 93338392 -109747140 - MIR SINE MIR -3 259 12 750 279 33 66 chr5 93338554 93339037 -109746495 - MLT1C LTR MaLR 0 467 1 559 331 90 26 chr5 93339058 93339369 -109746163 + L2 LINE L2 2850 3180 -133 199 274 96 41 chr5 93342213 93342286 -109743246 + MIR SINE MIR 22 98 -164 308 129 0 228 chr5 93342302 93342403 -109743129 - L1MA3 LINE L1 0 6305 6228 584 203 68 0 chr5 93342462 93342595 -109742937 - MIR SINE MIR 0 262 121 370 170 14 35 chr5 93342803 93342944 -109742588 + CT-rich Low_complexity Low_complexity 1 138 0 218 264 55 66 chr5 93343066 93343157 -109742375 - L2 LINE L2 -42 3230 3141 1631 152 69 36 chr5 93343167 93343530 -109742002 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr5 93344270 93344298 -109741234 + AT_rich Low_complexity Low_complexity 1 28 0 2487 192 43 77 chr5 93344663 93345262 -109740270 - MLT1E1 LTR MaLR -9 645 67 1567 160 28 0 chr5 93345640 93345890 -109739642 - AluJb SINE Alu -20 292 36 2180 105 10 13 chr5 93346085 93346398 -109739134 + AluSx SINE Alu 1 312 0 29 60 0 0 chr5 93346520 93346570 -109738962 + AT_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr5 93346615 93346661 -109738871 + AT_rich Low_complexity Low_complexity 1 46 0 284 281 94 0 chr5 93347079 93347175 -109738357 + MIR SINE MIR 22 126 -136 21 0 0 0 chr5 93347262 93347283 -109738249 + AT_rich Low_complexity Low_complexity 1 21 0 2356 41 0 0 chr5 93347727 93348017 -109737515 + L1PA4 LINE L1 5864 6153 -2 457 267 82 0 chr5 93348715 93348850 -109736682 + MIR SINE MIR 65 210 -52 220 146 24 0 chr5 93348927 93348968 -109736564 + (TAA)n Simple_repeat Simple_repeat 2 43 0 422 296 148 35 chr5 93349192 93349422 -109736110 - MIR SINE MIR 0 262 7 2074 119 0 26 chr5 93349939 93350242 -109735290 - AluSx SINE Alu -17 295 1 1127 300 37 13 chr5 93350349 93350726 -109734806 + LTR40b LTR ERVL 3 388 -74 2615 160 38 57 chr5 93350727 93351077 -109734455 - MLT2B1 LTR ERVL -5 515 177 3784 149 19 39 chr5 93351077 93351826 -109733706 - MER50 LTR ERV1 0 734 1 2615 160 38 57 chr5 93351826 93352000 -109733532 - MLT2B1 LTR ERVL -343 177 1 314 137 0 0 chr5 93352023 93352074 -109733458 + LTR40b LTR ERVL 412 462 0 32 81 0 0 chr5 93353549 93353623 -109731909 + AT_rich Low_complexity Low_complexity 1 74 0 272 309 0 0 chr5 93353728 93353796 -109731736 - L2 LINE L2 -19 3253 3186 259 266 40 60 chr5 93354553 93354752 -109730780 + L1MC/D LINE L1 4076 4270 -1876 1084 270 84 40 chr5 93355289 93355774 -109729758 + L1MC/D LINE L1 5281 5787 -560 1244 182 8 151 chr5 93357352 93357703 -109727829 + MER70A LTR ERVL 1 301 -171 367 189 122 0 chr5 93357718 93357792 -109727740 + MER70B LTR ERVL 494 576 -2 206 79 0 53 chr5 93358643 93358681 -109726851 + (TATATG)n Simple_repeat Simple_repeat 5 40 0 2069 143 15 9 chr5 93359337 93359672 -109725860 - MER7A DNA MER2_type -1 345 11 296 102 20 0 chr5 93359675 93359724 -109725808 + (TA)n Simple_repeat Simple_repeat 2 51 0 285 301 12 0 chr5 93360582 93360665 -109724867 + HERVL40 LTR ERVL 5447 5530 0 1554 258 43 31 chr5 93360668 93361179 -109724353 + LTR40a LTR ERVL 3 519 0 18671 191 26 10 chr5 93361197 93365470 -109720062 - L1PA13 LINE L1 -3 6811 2067 2178 122 3 0 chr5 93365470 93365774 -109719758 + AluSc SINE Alu 1 305 -4 18671 191 26 10 chr5 93365774 93367875 -109717657 - L1PA13 LINE L1 -4747 2067 1 246 382 12 6 chr5 93367913 93368078 -109717454 + MIR SINE MIR 97 262 0 25 0 0 0 chr5 93368394 93368419 -109717113 + AT_rich Low_complexity Low_complexity 1 25 0 2080 192 23 34 chr5 93369817 93370254 -109715278 + MSTB1 LTR MaLR 1 432 0 32 26 0 0 chr5 93371329 93371368 -109714164 + AT_rich Low_complexity Low_complexity 1 39 0 1710 89 126 11 chr5 93371653 93371922 -109713610 + AluSg SINE Alu 9 308 -2 21 0 0 0 chr5 93371947 93371968 -109713564 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 93372630 93372659 -109712873 + AT_rich Low_complexity Low_complexity 1 29 0 1069 244 125 26 chr5 93372820 93373277 -109712255 + MLT1H LTR MaLR 1 574 -16 1274 314 61 51 chr5 93373295 93373919 -109711613 - MER115 DNA AcHobo -63 630 1 879 277 43 29 chr5 93374123 93374606 -109710926 - L1MEd LINE L1 -3525 2690 2201 468 287 131 36 chr5 93374613 93375558 -109709974 - L1MEd LINE L1 -4163 2233 1120 300 250 25 58 chr5 93375756 93375876 -109709656 - L1MEd LINE L1 -5492 904 789 28 0 0 0 chr5 93377775 93377803 -109707729 + AT_rich Low_complexity Low_complexity 1 28 0 242 372 34 14 chr5 93378692 93378840 -109706692 + L3 LINE CR1 1254 1404 -173 7051 112 7 2 chr5 93379113 93380181 -109705351 + L1MA1 LINE L1 5230 6302 0 26 0 0 0 chr5 93380181 93380207 -109705325 + AT_rich Low_complexity Low_complexity 1 26 0 195 309 94 40 chr5 93380330 93380479 -109705053 + MIR SINE MIR 1 157 -105 24 0 0 0 chr5 93380746 93380770 -109704762 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr5 93381918 93381948 -109703584 + AT_rich Low_complexity Low_complexity 1 30 0 275 241 164 79 chr5 93382372 93382994 -109702538 - L1MC5 LINE L1 -26 7935 7261 232 176 80 56 chr5 93383135 93383260 -109702272 - L1MC5 LINE L1 -743 7218 7091 1085 92 92 0 chr5 93383282 93383435 -109702097 + AluSx SINE Alu 1 167 -145 2092 118 3 0 chr5 93383444 93383749 -109701783 - AluSg SINE Alu -4 306 1 637 259 45 91 chr5 93383938 93384290 -109701242 + L1ME1 LINE L1 5826 6161 -5 307 322 27 40 chr5 93385336 93385485 -109700047 - MIR SINE MIR -64 198 52 24 0 0 0 chr5 93386588 93386612 -109698920 + AT_rich Low_complexity Low_complexity 1 24 0 2127 95 4 0 chr5 93387206 93387480 -109698052 + AluSx SINE Alu 6 280 -32 240 35 0 0 chr5 93387481 93387510 -109698022 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1299 176 0 72 chr5 93387530 93387809 -109697723 + AluJo SINE Alu 11 269 -43 1022 67 30 12 chr5 93387812 93387976 -109697556 + (GAAAA)n Simple_repeat Simple_repeat 3 169 0 4855 52 0 0 chr5 93387976 93388567 -109696965 + LTR10C LTR ERV1 1 591 0 285 146 0 0 chr5 93388567 93388615 -109696917 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 271 250 0 0 chr5 93389202 93389254 -109696278 + MLT1C LTR MaLR 416 467 0 22 0 0 0 chr5 93389359 93389381 -109696151 + AT_rich Low_complexity Low_complexity 1 22 0 4489 148 5 12 chr5 93389381 93389683 -109695849 - L1MA4 LINE L1 0 6300 5997 1978 135 154 0 chr5 93389683 93390054 -109695478 + MSTA LTR MaLR 1 428 0 4489 148 5 12 chr5 93390054 93390553 -109694979 - L1MA4 LINE L1 -303 5997 5505 578 291 95 82 chr5 93390580 93390942 -109694590 - MLT1G1 LTR MaLR -183 412 1 205 354 137 0 chr5 93391912 93392073 -109693459 - L2 LINE L2 -173 3140 2958 1798 228 50 9 chr5 93392246 93392690 -109692842 - MLT1C LTR MaLR 0 467 6 307 276 134 15 chr5 93393211 93393345 -109692187 + MIR SINE MIR 99 248 -14 447 239 75 55 chr5 93394155 93394328 -109691204 + MIR3 SINE MIR 7 185 -23 2076 112 3 0 chr5 93394441 93394728 -109690804 + AluSx SINE Alu 1 288 -24 195 42 0 0 chr5 93394744 93394768 -109690764 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 201 398 42 31 chr5 93394958 93395149 -109690383 - MIR3 SINE MIR -6 202 10 3708 275 79 72 chr5 93395151 93395750 -109689782 + L2 LINE L2 1356 1949 -1364 1036 156 142 108 chr5 93395750 93395907 -109689625 + MLT1A1 LTR MaLR 1 151 -214 1934 121 28 7 chr5 93395907 93396232 -109689300 - AluSq SINE Alu 0 313 2 1036 156 142 108 chr5 93396232 93396427 -109689105 + MLT1A1 LTR MaLR 151 365 0 3708 275 79 72 chr5 93396427 93397275 -109688257 + L2 LINE L2 1949 2834 -479 1744 141 65 49 chr5 93397275 93397644 -109687888 + THE1C LTR MaLR 1 375 0 3708 275 79 72 chr5 93397644 93397977 -109687555 + L2 LINE L2 2834 3163 -150 28 48 0 0 chr5 93397985 93398027 -109687505 + AT_rich Low_complexity Low_complexity 1 42 0 194 416 22 0 chr5 93398064 93398153 -109687379 + L2 LINE L2 3155 3245 -27 2508 210 59 17 chr5 93398160 93398751 -109686781 + MLT1E3 LTR MaLR 9 624 0 21 36 0 0 chr5 93399023 93399051 -109686481 + AT_rich Low_complexity Low_complexity 1 28 0 2323 72 0 33 chr5 93399082 93399389 -109686143 - AluY SINE Alu -14 297 1 1759 125 4 0 chr5 93399448 93399688 -109685844 + AluSx SINE Alu 35 275 -37 187 54 54 0 chr5 93399693 93399730 -109685802 + A-rich Low_complexity Low_complexity 2 40 0 214 197 26 26 chr5 93400396 93400472 -109685060 + (TA)n Simple_repeat Simple_repeat 1 76 0 331 308 33 0 chr5 93401552 93401643 -109683889 + MIR3 SINE MIR 110 203 -5 358 100 0 0 chr5 93402112 93402162 -109683370 - L1PA8 LINE L1 -10 6162 6113 2551 91 5 3 chr5 93402162 93402742 -109682790 + L1PA8A LINE L1 5029 5609 -522 8352 150 19 8 chr5 93403004 93405285 -109680247 - L1PA11 LINE L1 -1 6173 3871 250 283 333 11 chr5 93406526 93406706 -109678826 + MIR SINE MIR 25 262 0 286 126 69 58 chr5 93407070 93407157 -109678375 + L1MA8 LINE L1 6198 6285 -6 24 0 0 0 chr5 93409734 93409758 -109675774 + AT_rich Low_complexity Low_complexity 1 24 0 55 0 0 0 chr5 93409779 93409834 -109675698 + AT_rich Low_complexity Low_complexity 1 55 0 4009 146 27 17 chr5 93410057 93410755 -109674777 - MER50 LTR ERV1 -29 705 1 1689 254 55 43 chr5 93410768 93411188 -109674344 - MLT1E LTR MaLR -2 591 162 2747 179 6 32 chr5 93411188 93411242 -109674290 - MLT2B2 LTR ERVL 0 515 461 405 0 0 0 chr5 93411242 93411287 -109674245 + (CA)n Simple_repeat Simple_repeat 2 46 0 2747 179 6 32 chr5 93411287 93411758 -109673774 - MLT2B2 LTR ERVL -54 461 4 1689 254 55 43 chr5 93411758 93411869 -109673663 - MLT1E LTR MaLR -431 162 54 1020 175 0 0 chr5 93412036 93412196 -109673336 + FRAM SINE Alu 1 158 -18 1892 149 3 0 chr5 93412270 93412559 -109672973 + AluJb SINE Alu 3 292 -20 200 200 0 0 chr5 93412653 93412693 -109672839 + T-rich Low_complexity Low_complexity 1 40 0 183 213 149 0 chr5 93413890 93413937 -109671595 + L2 LINE L2 78 131 -3183 23 33 0 0 chr5 93415326 93415356 -109670176 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 93416491 93416528 -109669004 + AT_rich Low_complexity Low_complexity 1 37 0 230 294 79 8 chr5 93416578 93416704 -109668828 - MLT1J LTR MaLR -28 483 349 21 36 0 0 chr5 93417087 93417115 -109668417 + AT_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr5 93417159 93417203 -109668329 + AT_rich Low_complexity Low_complexity 1 44 0 226 301 36 0 chr5 93418461 93418544 -109666988 + L2 LINE L2 982 1067 -2247 225 200 71 29 chr5 93419408 93419478 -109666054 + MSTB LTR MaLR 2 74 -352 966 172 83 8 chr5 93419652 93419988 -109665544 + MSTB1 LTR MaLR 1 426 0 283 306 36 18 chr5 93420155 93420266 -109665266 - MIR3 SINE MIR -49 159 47 219 36 0 0 chr5 93420815 93420843 -109664689 + (TA)n Simple_repeat Simple_repeat 2 29 0 3921 194 78 15 chr5 93421206 93421986 -109663546 + MER21B LTR ERV1 2 830 -33 2198 101 0 0 chr5 93422351 93422647 -109662885 + AluY SINE Alu 1 296 -15 22 88 0 0 chr5 93423075 93423132 -109662400 + AT_rich Low_complexity Low_complexity 1 57 0 560 286 51 143 chr5 93423719 93424244 -109661288 - L2 LINE L2 -443 2871 2395 224 167 69 28 chr5 93425167 93425239 -109660293 + L2 LINE L2 2296 2370 -944 2046 125 0 7 chr5 93426952 93427247 -109658285 + AluSx SINE Alu 1 293 -19 25 0 0 0 chr5 93427357 93427382 -109658150 + AT_rich Low_complexity Low_complexity 1 25 0 2345 27 23 1 chr5 93427671 93427964 -109657568 - L1PA3 LINE L1 -87 6068 5765 26 30 0 0 chr5 93427981 93428014 -109657518 + AT_rich Low_complexity Low_complexity 1 33 0 639 201 0 0 chr5 93430016 93430150 -109655382 + (TA)n Simple_repeat Simple_repeat 1 134 0 24 53 0 0 chr5 93430280 93430318 -109655214 + AT_rich Low_complexity Low_complexity 1 38 0 4073 171 30 11 chr5 93430456 93431388 -109654144 - L1MC1 LINE L1 -351 5982 5023 1118 214 28 72 chr5 93431387 93431599 -109653933 + L1MC3 LINE L1 4660 4849 -1297 * 1454 143 110 37 chr5 93431599 93431872 -109653660 - AluJo SINE Alu -19 293 1 1118 214 28 72 chr5 93431872 93432047 -109653485 + L1MC3 LINE L1 4849 5030 -1116 344 349 73 23 chr5 93432096 93432357 -109653175 - L1M4 LINE L1 -2529 3617 3344 443 355 32 8 chr5 93432475 93432726 -109652806 - LTR16B LTR ERVL 0 464 208 1666 119 85 31 chr5 93433060 93433353 -109652179 + AluSq SINE Alu 5 313 0 2003 119 0 31 chr5 93433363 93433683 -109651849 + AluSx SINE Alu 1 311 0 2250 198 67 8 chr5 93433953 93434790 -109650742 + L1MC3 LINE L1 5353 6335 -9 284 123 35 35 chr5 93435000 93435057 -109650475 - MLT2B3 LTR ERVL 0 520 464 697 149 31 0 chr5 93435057 93435218 -109650314 + (TA)n Simple_repeat Simple_repeat 1 166 0 2334 203 70 25 chr5 93435238 93435722 -109649810 - MLT2B3 LTR ERVL -48 506 1 1394 222 147 6 chr5 93436490 93436837 -109648695 - MSTD LTR MaLR 0 396 1 491 312 7 0 chr5 93437045 93437183 -109648349 - MER82 DNA MER2_type -1 652 514 2354 76 0 3 chr5 93437277 93437578 -109647954 + AluSg1 SINE Alu 1 300 -9 22 70 0 0 chr5 93437821 93437864 -109647668 + AT_rich Low_complexity Low_complexity 1 43 0 4332 166 10 3 chr5 93437868 93438741 -109646791 - L1MA7 LINE L1 -11 6280 5296 242 239 14 14 chr5 93439297 93439368 -109646164 + GA-rich Low_complexity Low_complexity 1 71 0 22 35 0 0 chr5 93441342 93441371 -109644161 + AT_rich Low_complexity Low_complexity 1 29 0 2429 66 0 7 chr5 93441618 93441919 -109643613 - AluY SINE Alu -12 299 1 483 132 13 0 chr5 93442890 93442966 -109642566 + MADE1 DNA Mariner 4 80 0 24 53 0 0 chr5 93443009 93443047 -109642485 + AT_rich Low_complexity Low_complexity 1 38 0 251 234 32 0 chr5 93443804 93443928 -109641604 + (TA)n Simple_repeat Simple_repeat 2 129 0 216 67 0 0 chr5 93444673 93444703 -109640829 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 204 40 0 0 chr5 93444754 93444779 -109640753 + (TAAAAA)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr5 93446877 93446899 -109638633 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 93447472 93447500 -109638032 + AT_rich Low_complexity Low_complexity 1 28 0 209 333 0 0 chr5 93447581 93447650 -109637882 + MIR SINE MIR 74 142 -120 10640 200 27 16 chr5 93447933 93447948 -109637584 + L1M1 LINE L1 3524 3537 -4028 3394 62 2 7 chr5 93447948 93448398 -109637134 + LTR7 LTR ERV1 1 448 -2 10640 200 27 16 chr5 93448398 93450829 -109634703 + L1M1 LINE L1 3537 6010 -1555 655 141 87 0 chr5 93451437 93451586 -109633946 + L1M1 LINE L1 3390 3551 -4014 16883 95 34 29 chr5 93451586 93454806 -109630726 + HERVH LTR ERV1 5 2995 -4718 976 120 7 0 chr5 93454785 93454935 -109630597 + HERVH LTR ERV1 3140 3290 -4423 * 3331 123 0 6 chr5 93454925 93455430 -109630102 + HERVH LTR ERV1 3492 3993 -3720 4304 140 9 1 chr5 93455432 93456089 -109629443 + HERVH LTR ERV1 4488 5149 -2564 1173 138 84 0 chr5 93456090 93456293 -109629239 + HERVH LTR ERV1 5600 5819 -1894 902 118 98 0 chr5 93456291 93456444 -109629088 + HERVH LTR ERV1 7322 7489 -224 * 277 249 46 17 chr5 93456876 93457049 -109628483 + (TA)n Simple_repeat Simple_repeat 1 178 0 269 301 88 8 chr5 93457713 93458097 -109627435 - L1MEc LINE L1 -4912 1484 1000 186 43 0 0 chr5 93458145 93458168 -109627364 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 425 232 0 7 chr5 93458506 93458644 -109626888 + (TA)n Simple_repeat Simple_repeat 1 137 0 41 82 0 0 chr5 93458712 93458809 -109626723 + AT_rich Low_complexity Low_complexity 1 97 0 2396 33 0 0 chr5 93462828 93463102 -109622430 + AluY SINE Alu 35 308 -3 655 178 70 24 chr5 93464001 93464262 -109621270 - MSTB LTR MaLR -58 368 59 531 288 4 96 chr5 93465105 93465334 -109620198 + MIR SINE MIR 6 213 -49 30 27 0 0 chr5 93466721 93466758 -109618774 + AT_rich Low_complexity Low_complexity 1 37 0 26 82 0 0 chr5 93466964 93467025 -109618507 + AT_rich Low_complexity Low_complexity 1 61 0 6500 201 72 40 chr5 93467754 93469410 -109616122 - MER52A LTR ERV1 0 1755 46 333 188 16 0 chr5 93470433 93470497 -109615035 + L1M2 LINE L1 5714 5778 -513 2068 122 20 10 chr5 93470881 93471184 -109614348 + AluSq SINE Alu 1 306 -7 894 141 12 8 chr5 93471242 93471499 -109614033 + CT-rich Low_complexity Low_complexity 1 258 0 30 0 0 0 chr5 93472477 93472507 -109613025 + AT_rich Low_complexity Low_complexity 1 30 0 3406 208 45 17 chr5 93472528 93473335 -109612197 - L1MA9 LINE L1 -39 6273 5445 1301 239 142 0 chr5 93475829 93476244 -109609288 - L1MEc LINE L1 -5587 809 336 3869 166 10 38 chr5 93476258 93477039 -109608493 + LTR1 LTR ERV1 27 785 0 904 276 27 34 chr5 93477052 93477345 -109608187 - L1MEc LINE L1 -6068 328 38 556 271 26 20 chr5 93477888 93478039 -109607493 - MIR SINE MIR -5 257 106 2187 71 47 3 chr5 93478874 93479170 -109606362 + AluY SINE Alu 1 309 -2 259 116 47 0 chr5 93479568 93479611 -109605921 + MER105 DNA DNA 155 199 -5 24 53 0 0 chr5 93479763 93479801 -109605731 + AT_rich Low_complexity Low_complexity 1 38 0 475 221 63 34 chr5 93480095 93480240 -109605292 + MIR SINE MIR 13 161 -47 451 332 55 13 chr5 93480452 93480687 -109604845 + L3 LINE CR1 1331 1575 -2 198 330 61 9 chr5 93481825 93481940 -109603592 - MIR SINE MIR -24 238 118 2291 95 9 16 chr5 93483851 93484166 -109601366 - AluSp SINE Alu 0 313 1 357 355 6 0 chr5 93485477 93485649 -109599883 + ERVL LTR ERVL 5172 5344 -420 1679 148 97 13 chr5 93487592 93487903 -109597629 - MER1B DNA MER1_type 0 337 1 213 343 35 80 chr5 93488064 93488265 -109597267 - L2 LINE L2 -274 2998 2807 787 189 0 0 chr5 93488773 93488905 -109596627 - FLAM_C SINE Alu -11 132 1 204 355 75 9 chr5 93489796 93489903 -109595629 - L2 LINE L2 -17 3255 3142 296 210 130 31 chr5 93490203 93490365 -109595167 + L1M4 LINE L1 3230 3407 -2739 26 0 0 0 chr5 93490487 93490513 -109595019 + AT_rich Low_complexity Low_complexity 1 26 0 423 353 96 41 chr5 93490932 93491442 -109594090 + L2 LINE L2 2329 2866 -448 528 326 43 13 chr5 93491486 93491716 -109593816 + L2 LINE L2 2148 2384 -930 193 189 54 0 chr5 93491768 93491805 -109593727 - MIR SINE MIR -62 146 108 320 338 64 67 chr5 93491975 93492336 -109593196 - MLT1K LTR MaLR -221 367 8 25 65 0 0 chr5 93492584 93492630 -109592902 + AT_rich Low_complexity Low_complexity 1 46 0 734 297 74 38 chr5 93492934 93493325 -109592207 + MLT1I LTR MaLR 1 405 -4 25 65 0 0 chr5 93495722 93495768 -109589764 + AT_rich Low_complexity Low_complexity 1 46 0 246 165 22 110 chr5 93496847 93496920 -109588612 - L2 LINE L2 -108 3205 3140 2239 97 0 3 chr5 93496920 93497218 -109588314 + AluSp SINE Alu 6 302 -11 246 165 22 110 chr5 93497218 93497235 -109588297 - L2 LINE L2 -173 3140 3123 2748 147 37 26 chr5 93498523 93499014 -109586518 + MER21A LTR ERV1 427 922 -9 3163 133 14 4 chr5 93499028 93499518 -109586014 + MER21A-int LTR ERV1 4 498 -3693 2102 133 136 5 chr5 93499519 93499895 -109585637 + MSTA LTR MaLR 4 428 0 8387 177 12 35 chr5 93499897 93501504 -109584028 + MSTA-int LTR MaLR 3 1572 -8 1813 163 134 11 chr5 93501506 93501887 -109583645 + MSTA LTR MaLR 1 428 0 1340 153 34 34 chr5 93501905 93502140 -109583392 + MER21A-int LTR ERV1 498 732 -3459 * 13001 135 49 20 chr5 93502138 93503300 -109582232 + MER21A-int LTR ERV1 1919 3046 -1145 2222 118 0 0 chr5 93503300 93503604 -109581928 - AluSx SINE Alu -8 304 1 13001 135 49 20 chr5 93503604 93504650 -109580882 + MER21A-int LTR ERV1 3046 4191 0 1222 165 86 1 chr5 93504686 93505098 -109580434 + MER21A LTR ERV1 28 494 -369 24 53 0 0 chr5 93505409 93505447 -109580085 + AT_rich Low_complexity Low_complexity 1 38 0 266 263 81 0 chr5 93505732 93505831 -109579701 - MER115 DNA AcHobo -9 684 578 1525 178 11 3 chr5 93505941 93506227 -109579305 + L1PB4 LINE L1 5855 6142 -14 22 0 0 0 chr5 93506254 93506276 -109579256 + AT_rich Low_complexity Low_complexity 1 22 0 1256 250 82 25 chr5 93506303 93506985 -109578547 - L1M4 LINE L1 -740 5438 4720 190 333 21 0 chr5 93507973 93508021 -109577511 - L2 LINE L2 -86 3186 3138 481 318 154 0 chr5 93509090 93509310 -109576222 + L2 LINE L2 2880 3133 -180 6744 65 8 0 chr5 93510705 93511962 -109573570 - L1PA5 LINE L1 0 6154 4892 16320 175 42 18 chr5 93511975 93515011 -109570521 + L1M1 LINE L1 146 3257 -4308 2795 252 114 29 chr5 93515120 93515189 -109570343 - Zaphod DNA AcHobo -279 3752 3690 1532 146 60 4 chr5 93515189 93515470 -109570062 + L1MA9 LINE L1 6016 6312 0 2795 252 114 29 chr5 93515470 93516566 -109568966 - Zaphod DNA AcHobo -341 3690 2473 339 25 0 0 chr5 93516566 93516606 -109568926 + (CA)n Simple_repeat Simple_repeat 1 40 0 2795 252 114 29 chr5 93516606 93516678 -109568854 - Zaphod DNA AcHobo -1558 2473 2409 1574 268 98 17 chr5 93516673 93516948 -109568584 - Zaphod DNA AcHobo -3243 788 537 * 4228 26 6 0 chr5 93516948 93517453 -109568079 + L1PA4 LINE L1 5648 6155 0 1574 268 98 17 chr5 93517453 93517719 -109567813 - Zaphod DNA AcHobo -3494 537 203 269 356 29 19 chr5 93517769 93517873 -109567659 - MIR SINE MIR -72 136 32 1976 113 44 17 chr5 93518113 93518406 -109567126 - AluSx SINE Alu -11 301 1 240 279 66 16 chr5 93518455 93518516 -109567016 + MIR SINE MIR 20 83 -125 445 322 57 0 chr5 93518707 93518884 -109566648 + MER5A DNA MER1_type 3 189 0 21 36 0 0 chr5 93520184 93520212 -109565320 + AT_rich Low_complexity Low_complexity 1 28 0 819 300 50 32 chr5 93520409 93520786 -109564746 - MER93a LTR ERV1 0 402 19 21 95 0 0 chr5 93520854 93520917 -109564615 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr5 93521046 93521068 -109564464 + AT_rich Low_complexity Low_complexity 1 22 0 30 69 0 39 chr5 93521517 93521619 -109563913 + AT_rich Low_complexity Low_complexity 1 98 0 23 33 0 0 chr5 93521688 93521718 -109563814 + AT_rich Low_complexity Low_complexity 1 30 0 1131 220 24 103 chr5 93522995 93523373 -109562159 - MLT1A1 LTR MaLR -17 348 1 32 0 0 0 chr5 93525646 93525678 -109559854 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 93526051 93526072 -109559460 + AT_rich Low_complexity Low_complexity 1 21 0 1334 104 0 6 chr5 93526078 93526260 -109559272 - AluSp SINE Alu -132 181 1 5221 215 25 26 chr5 93526349 93527675 -109557857 + L1 LINE L1 3975 5298 -848 40 0 0 0 chr5 93527847 93527887 -109557645 + AT_rich Low_complexity Low_complexity 1 40 0 2235 41 41 14 chr5 93529494 93529787 -109555745 + AluY SINE Alu 1 301 -10 2022 117 6 22 chr5 93530053 93530370 -109555162 + AluSx SINE Alu 1 312 0 3259 155 10 2 chr5 93531491 93532014 -109553518 + MER1A DNA MER1_type 1 527 0 918 188 78 0 chr5 93532932 93533124 -109552408 - L1PA16 LINE L1 -19 6147 5941 21 36 0 0 chr5 93534136 93534164 -109551368 + AT_rich Low_complexity Low_complexity 1 28 0 649 243 70 16 chr5 93534621 93534806 -109550726 + LTR16B LTR ERVL 270 464 0 294 337 41 49 chr5 93534956 93535321 -109550211 + ERVL LTR ERVL 5010 5371 -393 1063 272 167 10 chr5 93535464 93535854 -109549678 + LTR16B LTR ERVL 12 462 -2 344 307 13 40 chr5 93535860 93536010 -109549522 + LTR16C LTR ERVL 274 419 -72 1011 241 61 4 chr5 93536016 93536411 -109549121 + MLT1F1 LTR MaLR 1 567 0 732 183 0 7 chr5 93536475 93536612 -109548920 + Tigger1 DNA MER2_type 11 146 -2272 * 1243 153 9 14 chr5 93536610 93536833 -109548699 + Tigger1 DNA MER2_type 2197 2418 0 432 198 21 10 chr5 93536868 93536964 -109548568 - MLT1E LTR MaLR 0 593 497 280 294 37 0 chr5 93536973 93537082 -109548450 + (CATA)n Simple_repeat Simple_repeat 3 115 0 23 33 0 0 chr5 93537116 93537146 -109548386 + AT_rich Low_complexity Low_complexity 1 30 0 1732 176 0 3 chr5 93537801 93538090 -109547442 + AluJo SINE Alu 1 288 -24 578 325 84 4 chr5 93538287 93538524 -109547008 - MIR SINE MIR -4 258 3 276 303 0 18 chr5 93539168 93539277 -109546255 - L1M LINE L1 -2446 5362 5256 23 0 0 0 chr5 93539363 93539386 -109546146 + AT_rich Low_complexity Low_complexity 1 23 0 2052 125 3 7 chr5 93539612 93539915 -109545617 + AluSq SINE Alu 3 304 -9 22 0 0 0 chr5 93540741 93540763 -109544769 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr5 93541994 93542026 -109543506 + AT_rich Low_complexity Low_complexity 1 32 0 1891 88 20 0 chr5 93542544 93542795 -109542737 - AluSp SINE Alu -3 310 55 203 348 0 0 chr5 93543053 93543122 -109542410 - L2 LINE L2 -19 3294 3226 2565 170 18 31 chr5 93543355 93543902 -109541630 - L1MA8 LINE L1 0 6291 5752 210 196 22 65 chr5 93544814 93544906 -109540626 + (AAATG)n Simple_repeat Simple_repeat 4 91 0 396 330 5 24 chr5 93545246 93545452 -109540080 + HAL1b LINE L1 339 540 -808 26 50 0 0 chr5 93545837 93545877 -109539655 + AT_rich Low_complexity Low_complexity 1 40 0 385 302 60 92 chr5 93545932 93546185 -109539347 + L1M4 LINE L1 2115 2375 -3771 1740 225 112 72 chr5 93546185 93546979 -109538553 - LTR1B LTR ERV1 0 826 1 385 302 60 92 chr5 93546979 93547000 -109538532 + L1M4 LINE L1 2375 2395 -3751 2459 55 0 3 chr5 93547000 93547309 -109538223 + AluY SINE Alu 1 308 -3 385 302 60 92 chr5 93547309 93547689 -109537843 + L1M4 LINE L1 2395 2749 -3397 575 50 30 10 chr5 93547689 93547790 -109537742 + (TA)n Simple_repeat Simple_repeat 1 103 0 695 276 166 46 chr5 93547819 93548338 -109537194 + MLT2F LTR ERVL 55 635 -28 613 256 35 77 chr5 93548409 93548721 -109536811 + MLT1G1 LTR MaLR 5 303 -227 * 674 262 162 42 chr5 93548716 93548908 -109536624 + MLT1G1 LTR MaLR 412 595 0 202 351 30 46 chr5 93550411 93550542 -109534990 - L2 LINE L2 -12 3260 3132 1048 154 0 0 chr5 93601864 93602046 -109483486 - L1M1 LINE L1 -823 5480 5299 2971 219 18 1 chr5 93602074 93602742 -109482790 - L1M1 LINE L1 -1024 5122 4444 1347 164 36 72 chr5 93602752 93603056 -109482476 - MER82 DNA MER2_type -155 498 206 444 156 0 13 chr5 93603156 93603233 -109482299 - MSTB1 LTR MaLR -354 78 3 221 0 35 0 chr5 93603234 93603263 -109482269 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 22 0 0 0 chr5 93603300 93603322 -109482210 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 93603497 93603532 -109482000 + AT_rich Low_complexity Low_complexity 1 35 0 265 200 0 0 chr5 93604468 93604523 -109481009 - L1MCa LINE L1 -5480 946 892 27 0 0 0 chr5 93604923 93604950 -109480582 + AT_rich Low_complexity Low_complexity 1 27 0 30 59 0 0 chr5 93605935 93605986 -109479546 + AT_rich Low_complexity Low_complexity 1 51 0 2194 148 33 18 chr5 93606088 93606481 -109479051 + MSTB1 LTR MaLR 34 432 0 204 40 0 0 chr5 93606492 93606517 -109479015 + (CA)n Simple_repeat Simple_repeat 2 26 0 223 263 88 12 chr5 93607193 93607273 -109478259 - MIR SINE MIR -48 214 129 47 0 0 0 chr5 93607291 93607338 -109478194 + AT_rich Low_complexity Low_complexity 1 47 0 316 331 115 0 chr5 93607806 93607936 -109477596 - L1MCa LINE L1 -6117 490 346 873 194 31 5 chr5 93607981 93608172 -109477360 + THE1C LTR MaLR 180 375 0 548 268 41 86 chr5 93608525 93608745 -109476787 + L2 LINE L2 3099 3308 -5 3946 51 0 0 chr5 93608762 93609249 -109476283 - L1PA5 LINE L1 -1 6153 5667 289 164 27 0 chr5 93609367 93609440 -109476092 + (TTA)n Simple_repeat Simple_repeat 2 76 0 203 127 70 28 chr5 93609444 93609515 -109476017 + (TTATA)n Simple_repeat Simple_repeat 2 75 0 21 36 0 0 chr5 93609740 93609768 -109475764 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 93610579 93610603 -109474929 + AT_rich Low_complexity Low_complexity 1 24 0 1680 155 6 31 chr5 93610679 93610996 -109474536 + AluSq SINE Alu 1 309 -4 805 319 14 18 chr5 93611948 93612230 -109473302 + MLT1I LTR MaLR 104 384 -25 25 31 0 0 chr5 93612287 93612319 -109473213 + AT_rich Low_complexity Low_complexity 1 32 0 3240 213 33 8 chr5 93613173 93613891 -109471641 - L1MB3 LINE L1 -3 6180 5445 6885 25 1 1 chr5 93615331 93616526 -109469006 + L1PA4 LINE L1 4864 6058 -97 588 127 164 0 chr5 93616626 93616736 -109468796 + L1MA5 LINE L1 5639 5766 -534 276 122 0 0 chr5 93616765 93616806 -109468726 + 5S rRNA rRNA 12 52 -69 4379 80 5 0 chr5 93616806 93617378 -109468154 + HERVL-A2 LTR ERVL 1642 2216 -3438 22596 97 11 1 chr5 93617392 93620449 -109465083 + HERVL-A2 LTR ERVL 2565 5654 0 3050 103 11 35 chr5 93620449 93620913 -109464619 + MLT2A2 LTR ERVL 1 453 0 2380 179 13 51 chr5 93620974 93621506 -109464026 + L1MA5 LINE L1 5789 6300 0 27 29 0 0 chr5 93621512 93621546 -109463986 + AT_rich Low_complexity Low_complexity 1 34 0 2176 124 0 0 chr5 93621892 93622191 -109463341 + AluSq SINE Alu 1 299 -14 23 0 0 0 chr5 93623382 93623405 -109462127 + AT_rich Low_complexity Low_complexity 1 23 0 648 234 127 10 chr5 93624948 93625153 -109460379 + MIR SINE MIR 3 231 -31 644 332 84 14 chr5 93625211 93625557 -109459975 - MLT1J2 LTR MaLR -17 433 64 471 179 0 0 chr5 93625578 93625662 -109459870 - MSTB-int LTR MaLR -250 1401 1318 1296 211 23 4 chr5 93625829 93626090 -109459442 - MSTB LTR MaLR 0 426 161 328 155 0 0 chr5 93626197 93626255 -109459277 - MSTB-int LTR MaLR -1165 486 429 1836 173 9 0 chr5 93626255 93626573 -109458959 - MSTB-int LTR MaLR -1329 322 2 1989 191 19 35 chr5 93626578 93627007 -109458525 - MSTB LTR MaLR -4 422 1 975 152 22 48 chr5 93627007 93627237 -109458295 + L1MA6 LINE L1 6077 6300 0 23 68 0 0 chr5 93627417 93627461 -109458071 + AT_rich Low_complexity Low_complexity 1 44 0 332 294 20 48 chr5 93627969 93628115 -109457417 + MIR SINE MIR 121 262 0 323 356 11 35 chr5 93629200 93629374 -109456158 - MIR3 SINE MIR -30 178 9 183 329 123 0 chr5 93630033 93630106 -109455426 - L2 LINE L2 0 3272 3191 509 293 30 15 chr5 93630379 93630577 -109454955 + L1MEd LINE L1 5 205 -5914 2104 120 0 3 chr5 93630693 93631003 -109454529 - AluSx SINE Alu 0 309 1 367 369 75 4 chr5 93631017 93631258 -109454274 + L2 LINE L2 2708 2965 -349 2235 127 14 11 chr5 93631261 93631622 -109453910 + THE1B LTR MaLR 1 362 -2 10438 107 37 5 chr5 93631624 93633154 -109452378 + THE1B-int LTR MaLR 1 1580 0 2538 118 3 6 chr5 93633156 93633519 -109452013 + THE1B LTR MaLR 3 364 0 1419 282 60 54 chr5 93634008 93634859 -109450673 + HAL1 LINE L1 1356 2211 -296 711 261 38 57 chr5 93635070 93635334 -109450198 - MLT1I LTR MaLR -58 351 93 211 266 234 0 chr5 93635581 93635675 -109449857 - MIR SINE MIR -56 206 91 224 209 0 0 chr5 93635733 93635776 -109449756 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1747 141 3 39 chr5 93636964 93637270 -109448262 - AluSx SINE Alu -17 295 1 1821 141 18 3 chr5 93637347 93637631 -109447901 - AluSx SINE Alu -24 288 1 222 250 25 0 chr5 93638510 93638590 -109446942 + (TA)n Simple_repeat Simple_repeat 1 82 0 2345 110 0 0 chr5 93638706 93639014 -109446518 + AluSx SINE Alu 2 309 -3 24 32 0 0 chr5 93640097 93640128 -109445404 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr5 93640711 93640747 -109444785 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 93640868 93640897 -109444635 + AT_rich Low_complexity Low_complexity 1 29 0 515 337 47 0 chr5 93641305 93641495 -109444037 + MIR SINE MIR 30 228 -34 335 300 8 17 chr5 93641513 93641633 -109443899 + CT-rich Low_complexity Low_complexity 3 121 0 1825 86 0 0 chr5 93641922 93642166 -109443366 + L1PA7 LINE L1 5885 6128 -26 240 145 29 29 chr5 93642167 93642236 -109443296 + (TA)n Simple_repeat Simple_repeat 1 69 0 475 117 18 47 chr5 93643634 93643805 -109441727 + (TA)n Simple_repeat Simple_repeat 2 167 0 834 228 102 73 chr5 93643987 93644290 -109441242 - MLT1D LTR MaLR -193 312 1 180 0 0 0 chr5 93644398 93644418 -109441114 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 354 169 0 0 chr5 93645582 93645647 -109439885 + CT-rich Low_complexity Low_complexity 3 67 0 4325 99 21 152 chr5 93646513 93648041 -109437491 - pTR5 LTR ERV1 -1 2605 1523 308 321 0 0 chr5 93648683 93648764 -109436768 + GA-rich Low_complexity Low_complexity 4 84 0 870 191 12 0 chr5 93648931 93649099 -109436433 - L1MC1 LINE L1 -1 6332 6163 1053 289 42 9 chr5 93649105 93649554 -109435978 - L1M4 LINE L1 -2399 3747 3284 2104 187 29 0 chr5 93650488 93650873 -109434659 - MER57A LTR ERV1 0 403 8 4758 55 2 0 chr5 93651235 93651820 -109433712 + LTR10C LTR ERV1 1 586 -5 58 15 0 0 chr5 93651855 93651920 -109433612 + AT_rich Low_complexity Low_complexity 1 65 0 238 302 172 26 chr5 93652289 93652481 -109433051 - HAL1 LINE L1 -1795 712 493 1479 206 30 0 chr5 93652825 93653121 -109432411 + AluJb SINE Alu 1 305 -7 347 373 111 27 chr5 93653237 93653688 -109431844 + L2 LINE L2 2402 2890 -424 342 183 0 0 chr5 93655810 93655881 -109429651 + (TA)n Simple_repeat Simple_repeat 2 72 0 689 180 21 58 chr5 93656113 93656302 -109429230 + MER53 DNA DNA 2 183 -6 446 314 47 50 chr5 93656474 93656732 -109428800 - MIR SINE MIR 0 262 6 263 141 16 0 chr5 93657676 93657740 -109427792 + (TA)n Simple_repeat Simple_repeat 1 65 0 1691 121 0 0 chr5 93657755 93657987 -109427545 - AluSx SINE Alu -45 267 36 506 286 92 18 chr5 93658159 93658386 -109427146 - MIR SINE MIR -1 261 18 22 70 0 0 chr5 93658472 93658515 -109427017 + AT_rich Low_complexity Low_complexity 1 43 0 550 163 0 0 chr5 93659130 93659216 -109426316 - MER30 DNA MER1_type 0 230 145 2065 117 0 7 chr5 93659296 93659603 -109425929 - L1PA11 LINE L1 0 6174 5870 902 94 87 0 chr5 93659613 93659762 -109425770 - MER30 DNA MER1_type -67 163 2 1811 169 43 9 chr5 93660393 93660718 -109424814 - MER7A DNA MER2_type -12 334 1 30 0 0 0 chr5 93661790 93661820 -109423712 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr5 93662114 93662156 -109423376 + AT_rich Low_complexity Low_complexity 1 42 0 2491 143 24 43 chr5 93662672 93663133 -109422399 - Tigger4(Zombi) DNA MER2_type 0 2731 2280 6643 148 45 57 chr5 93663313 93664093 -109421439 - L1MA3 LINE L1 -120 7604 6816 2205 83 0 0 chr5 93664093 93664382 -109421150 - AluY SINE Alu -22 289 1 6643 148 45 57 chr5 93664382 93664520 -109421012 - L1MA3 LINE L1 -908 6816 6678 2214 97 17 26 chr5 93664520 93664870 -109420662 - L1PA13 LINE L1 -3 6160 5814 6643 148 45 57 chr5 93664870 93666501 -109419031 - L1MA3 LINE L1 -1046 6678 4246 3793 184 13 16 chr5 93666503 93667194 -109418338 - L1MA3 LINE L1 -6864 701 13 369 0 0 0 chr5 93667422 93667463 -109418069 + (TG)n Simple_repeat Simple_repeat 2 42 0 375 295 62 0 chr5 93668328 93668440 -109417092 + MIR SINE MIR 13 131 -131 261 0 0 0 chr5 93668558 93668587 -109416945 + (TTA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 93668749 93668770 -109416762 + AT_rich Low_complexity Low_complexity 1 21 0 2144 112 0 0 chr5 93669058 93669343 -109416189 - AluSx SINE Alu -18 294 10 22 0 0 0 chr5 93669518 93669540 -109415992 + AT_rich Low_complexity Low_complexity 1 22 0 673 292 10 10 chr5 93669613 93669822 -109415710 - MER63A DNA MER1_type 0 210 2 230 279 31 70 chr5 93669866 93670064 -109415468 + L1MC/D LINE L1 5561 5750 -609 180 250 0 0 chr5 93670340 93670388 -109415144 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 295 255 21 28 chr5 93670398 93670539 -109414993 + (TA)n Simple_repeat Simple_repeat 1 140 0 382 301 118 28 chr5 93670920 93671209 -109414323 + L1ME4a LINE L1 5535 5849 -272 428 303 96 46 chr5 93671268 93671591 -109413941 + L2 LINE L2 2375 2713 -601 394 382 24 76 chr5 93671698 93671986 -109413546 + L2 LINE L2 2979 3251 -21 424 363 63 8 chr5 93672193 93672430 -109413102 - MIR SINE MIR -11 251 2 21 0 0 0 chr5 93672889 93672910 -109412622 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 93673796 93673825 -109411707 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 93673983 93674021 -109411511 + AT_rich Low_complexity Low_complexity 1 38 0 1561 211 46 55 chr5 93674328 93674862 -109410670 - MER67C LTR ERV1 -8 506 18 1109 124 20 15 chr5 93675284 93675485 -109410047 - L1MA5A LINE L1 -1 6296 6095 27 0 0 0 chr5 93676021 93676048 -109409484 + AT_rich Low_complexity Low_complexity 1 27 0 274 338 123 15 chr5 93676330 93676534 -109408998 + MIR SINE MIR 37 262 0 27 0 0 0 chr5 93677252 93677279 -109408253 + AT_rich Low_complexity Low_complexity 1 27 0 18187 173 36 31 chr5 93677865 93679974 -109405558 - L1MA2 LINE L1 0 7723 5626 2160 83 0 7 chr5 93679974 93680250 -109405282 - AluY SINE Alu -37 274 1 18187 173 36 31 chr5 93680250 93684058 -109401474 - L1MA2 LINE L1 -2097 5626 1748 207 0 0 0 chr5 93684058 93684081 -109401451 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 18187 173 36 31 chr5 93684081 93685827 -109399705 - L1MA2 LINE L1 -5975 1748 12 2400 116 28 3 chr5 93686267 93686620 -109398912 - THE1B LTR MaLR -2 362 1 332 333 66 53 chr5 93687565 93688249 -109397283 + L1M4 LINE L1 3720 4412 -1734 572 144 126 36 chr5 93689610 93689721 -109395811 + FLAM_C SINE Alu 11 131 -12 282 141 14 70 chr5 93689991 93690062 -109395470 - L1PA16 LINE L1 0 6166 6100 3786 180 47 22 chr5 93690065 93691098 -109394434 - L1PA16 LINE L1 -105 6061 5002 3004 208 12 10 chr5 93691098 93691782 -109393750 + L1PA16 LINE L1 4313 4997 -1149 429 298 25 6 chr5 93692023 93692181 -109393351 - MIR SINE MIR -36 226 66 515 368 12 0 chr5 93692690 93692853 -109392679 - L3 LINE CR1 -10 1567 1403 638 73 10 83 chr5 93693291 93693483 -109392049 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 348 163 0 193 chr5 93693560 93693695 -109391837 - L1MB4 LINE L1 -2 6178 6070 190 387 0 24 chr5 93694045 93694169 -109391363 + L2 LINE L2 3193 3313 0 864 373 29 5 chr5 93694602 93694977 -109390555 + LTR16C LTR ERVL 97 480 -11 2329 265 73 9 chr5 93695124 93696436 -109389096 + L1MC3 LINE L1 655 2243 -4502 845 207 144 3 chr5 93696434 93696733 -109388799 + L1MC3 LINE L1 2197 2537 -4027 * 348 24 0 0 chr5 93696736 93696777 -109388755 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 5580 146 27 2 chr5 93696777 93697939 -109387593 - L1PB2 LINE L1 -11 6140 4954 1795 222 3 0 chr5 93697933 93698311 -109387221 + L1 LINE L1 3931 4309 -1837 * 252 0 0 0 chr5 93698399 93698427 -109387105 + (TG)n Simple_repeat Simple_repeat 2 29 0 230 290 0 0 chr5 93698427 93698489 -109387043 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2231 88 0 25 chr5 93698852 93699171 -109386361 - AluY SINE Alu 0 311 1 1411 211 3 6 chr5 93699478 93699800 -109385732 + L1 LINE L1 4446 4766 -1380 * 5968 251 63 26 chr5 93699794 93703195 -109382337 + L1MC3 LINE L1 3034 5821 -743 329 175 0 0 chr5 93703202 93703265 -109382267 + L1MC3 LINE L1 7582 7644 -559 1402 224 86 2 chr5 93703270 93703304 -109382228 + L1MC3 LINE L1 7758 7788 -415 378 0 0 0 chr5 93703304 93703346 -109382186 + (CA)n Simple_repeat Simple_repeat 1 42 0 1402 224 86 2 chr5 93703346 93703708 -109381824 + L1MC3 LINE L1 7788 8187 -16 21 36 0 0 chr5 93703789 93703817 -109381715 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 93703871 93703900 -109381632 + AT_rich Low_complexity Low_complexity 1 29 0 699 265 6 12 chr5 93704265 93704431 -109381101 - MLT1C LTR MaLR 0 467 303 422 215 0 0 chr5 93704499 93704578 -109380954 - L1MC2 LINE L1 -348 5996 5918 764 169 60 132 chr5 93704582 93704848 -109380684 - MLT1C LTR MaLR -220 247 1 308 241 35 7 chr5 93704951 93705092 -109380440 + (TA)n Simple_repeat Simple_repeat 1 145 0 1811 238 17 4 chr5 93705549 93706020 -109379512 - L1 LINE L1 -2442 3704 3228 1299 196 7 0 chr5 93706014 93706289 -109379243 + L1 LINE L1 3706 3982 -2164 * 6034 123 8 8 chr5 93706280 93707845 -109377687 + L1PA13 LINE L1 4451 6163 0 5471 202 22 9 chr5 93707849 93709050 -109376482 + L1PA16 LINE L1 3984 5167 -999 2385 119 14 27 chr5 93709050 93709419 -109376113 + THE1B LTR MaLR 1 364 0 9367 127 69 1 chr5 93709419 93710899 -109374633 + THE1B-int LTR MaLR 1 1580 0 2487 111 11 0 chr5 93710900 93711259 -109374273 + THE1B LTR MaLR 2 364 0 5471 202 22 9 chr5 93711259 93712209 -109373323 + L1PA16 LINE L1 5166 6166 0 420 310 57 48 chr5 93712642 93712871 -109372661 + L1ME4a LINE L1 5721 5951 -170 28 48 0 0 chr5 93712974 93713016 -109372516 + AT_rich Low_complexity Low_complexity 1 42 0 1602 213 46 3 chr5 93713028 93713352 -109372180 - MER2 DNA MER2_type -7 338 1 25 51 0 0 chr5 93714204 93714243 -109371289 + AT_rich Low_complexity Low_complexity 1 39 0 28 48 0 0 chr5 93714337 93714379 -109371153 + AT_rich Low_complexity Low_complexity 1 42 0 595 251 131 11 chr5 93714488 93714679 -109370853 - MER20 DNA MER1_type -5 214 1 226 247 236 0 chr5 93714740 93714829 -109370703 + MIR SINE MIR 153 262 0 195 214 0 0 chr5 93714864 93714906 -109370626 + MIR3 SINE MIR 160 201 -7 28 29 0 0 chr5 93715211 93715246 -109370286 + AT_rich Low_complexity Low_complexity 1 35 0 693 330 90 63 chr5 93715343 93716179 -109369353 - HERV16 LTR ERVL -1964 3032 2234 2010 200 77 56 chr5 93716280 93716716 -109368816 + MLT2B2 LTR ERVL 26 474 -41 288 91 0 0 chr5 93716716 93716760 -109368772 + (TG)n Simple_repeat Simple_repeat 1 44 0 2010 200 77 56 chr5 93716760 93716803 -109368729 + MLT2B2 LTR ERVL 474 515 0 312 298 41 16 chr5 93716814 93716935 -109368597 - HERV16 LTR ERVL -3264 2221 2098 305 366 118 24 chr5 93716972 93717303 -109368229 - HERV16 LTR ERVL -2944 2052 1691 257 422 23 7 chr5 93717335 93717641 -109367891 - HERV16 LTR ERVL -4122 1642 1332 265 312 13 0 chr5 93718297 93718374 -109367158 + LTR16C LTR ERVL 317 394 -97 232 97 0 0 chr5 93718758 93718789 -109366743 - MLT2B1 LTR ERVL 0 515 485 363 78 0 0 chr5 93718789 93718840 -109366692 + (CA)n Simple_repeat Simple_repeat 2 52 0 180 82 41 20 chr5 93718921 93718970 -109366562 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 1182 240 4 4 chr5 93719052 93719277 -109366255 - MER8 DNA MER2_type -13 226 2 * 1768 233 66 22 chr5 93719277 93719731 -109365801 - MLT2B1 LTR ERVL -46 474 1 285 266 31 0 chr5 93719785 93719849 -109365683 - HERV16 LTR ERVL -4930 66 1 582 352 46 36 chr5 93719896 93720334 -109365198 - LTR16C LTR ERVL -49 442 1 23 33 0 0 chr5 93720393 93720423 -109365109 + AT_rich Low_complexity Low_complexity 1 30 0 922 126 0 0 chr5 93721501 93721651 -109363881 + AluSg/x SINE Alu 156 305 0 1376 150 0 0 chr5 93722032 93722258 -109363274 + Tigger4(Zombi) DNA MER2_type 2506 2731 0 23 0 0 0 chr5 93723093 93723116 -109362416 + AT_rich Low_complexity Low_complexity 1 23 0 411 349 59 47 chr5 93723139 93723477 -109362055 + L2 LINE L2 2882 3223 -90 2177 190 20 78 chr5 93723710 93724315 -109361217 + MER101B LTR ERV1 1 570 0 213 39 0 0 chr5 93724390 93724416 -109361116 + (T)n Simple_repeat Simple_repeat 1 26 0 1520 171 67 23 chr5 93726097 93726443 -109359089 + MER46B DNA MER2_type 1 236 0 24 32 0 0 chr5 93729370 93729401 -109356131 + AT_rich Low_complexity Low_complexity 1 31 0 302 373 92 15 chr5 93729677 93730015 -109355517 + L1ME LINE L1 141 504 -5701 2184 184 35 16 chr5 93730023 93730453 -109355079 - MER101B LTR ERV1 0 570 133 1120 216 35 28 chr5 93730463 93730718 -109354814 - AluJo SINE Alu -53 259 3 734 178 7 7 chr5 93730724 93730859 -109354673 - MER101B LTR ERV1 -435 135 1 963 76 0 15 chr5 93730901 93731032 -109354500 - AluSg/x SINE Alu -13 297 169 389 299 47 33 chr5 93731450 93731661 -109353871 + L1ME LINE L1 1311 1524 -4872 569 318 90 41 chr5 93731677 93732435 -109353097 + L1ME LINE L1 1574 2368 -4028 9628 174 16 13 chr5 93732466 93734335 -109351197 + L1PA13 LINE L1 3117 4990 -1156 5346 125 19 14 chr5 93734345 93734814 -109350718 + L1PA13 LINE L1 5266 5731 -432 2118 166 28 14 chr5 93734814 93735170 -109350362 + THE1B LTR MaLR 4 364 0 11021 102 18 1 chr5 93735170 93736724 -109348808 + THE1B-int LTR MaLR 1 1580 0 2129 146 39 17 chr5 93736724 93737080 -109348452 + THE1B LTR MaLR 1 364 0 5346 125 19 14 chr5 93737080 93737497 -109348035 + L1PA13 LINE L1 5730 6160 -3 237 65 0 0 chr5 93737709 93737740 -109347792 + (GA)n Simple_repeat Simple_repeat 2 32 0 558 316 24 24 chr5 93738473 93738679 -109346853 + MLT1I LTR MaLR 63 268 -141 348 271 102 80 chr5 93738813 93739190 -109346342 + L1ME LINE L1 5315 5701 -420 341 136 17 0 chr5 93739457 93739516 -109346016 + MSTA LTR MaLR 1 60 -368 764 119 9 0 chr5 93739626 93739735 -109345797 + MSTA LTR MaLR 319 428 0 325 309 81 0 chr5 93740537 93740660 -109344872 + MER94 DNA DNA 2 134 0 1144 206 114 36 chr5 93740993 93741353 -109344179 + MLT1B LTR MaLR 1 388 -2 600 241 16 73 chr5 93741399 93741590 -109343942 + MLT1A1 LTR MaLR 1 180 -185 281 217 15 1 chr5 93741684 93741758 -109343774 + MSTD LTR MaLR 328 394 -2 536 259 16 65 chr5 93741785 93741970 -109343562 - MLT1I LTR MaLR -203 206 31 600 138 9 37 chr5 93742443 93742552 -109342980 + 7SLRNA srpRNA srpRNA 213 318 -2 203 261 0 0 chr5 93742553 93742599 -109342933 + A-rich Low_complexity Low_complexity 5 50 0 423 0 0 0 chr5 93743008 93743055 -109342477 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2187 108 0 3 chr5 93743164 93743470 -109342062 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr5 93744545 93744568 -109340964 + AT_rich Low_complexity Low_complexity 1 23 0 41 0 0 0 chr5 93744586 93744627 -109340905 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr5 93745278 93745306 -109340226 + AT_rich Low_complexity Low_complexity 1 28 0 565 297 7 0 chr5 93745536 93745691 -109339841 + MER63A DNA MER1_type 53 208 -2 1742 254 99 45 chr5 93746018 93747402 -109338130 - L1ME2 LINE L1 -16 6217 4750 1105 276 84 61 chr5 93747424 93748599 -109336933 - L1ME2 LINE L1 -2697 3518 2317 28 91 0 0 chr5 93748656 93748733 -109336799 + AT_rich Low_complexity Low_complexity 1 77 0 616 285 85 32 chr5 93748741 93749417 -109336115 - L1ME2 LINE L1 -4986 1219 629 1742 162 69 11 chr5 93749533 93749896 -109335636 - L1PB1 LINE L1 -3 6148 5759 224 111 78 33 chr5 93749901 93749991 -109335541 + (TTATA)n Simple_repeat Simple_repeat 4 97 0 285 29 0 0 chr5 93750031 93750065 -109335467 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 3458 113 17 11 chr5 93750066 93750682 -109334850 - L1PB1 LINE L1 -371 5780 5162 2517 210 23 5 chr5 93750652 93751257 -109334275 + L1MA4 LINE L1 4090 4705 -1441 * 605 277 93 18 chr5 93751663 93751941 -109333591 - LTR43 LTR ERV1 -124 478 180 483 393 71 20 chr5 93752872 93753482 -109332050 + L2 LINE L2 2399 3041 -231 3298 209 28 11 chr5 93754167 93755403 -109330129 + L1MA4 LINE L1 4770 6026 -274 2195 107 0 7 chr5 93755405 93755714 -109329818 + AluSx SINE Alu 1 307 -5 869 212 0 12 chr5 93756437 93756607 -109328925 - FRAM SINE Alu -8 168 1 550 254 123 11 chr5 93758356 93758640 -109326892 + L1ME3A LINE L1 2247 2562 -3584 2795 16 0 0 chr5 93758688 93759001 -109326531 + AluYb8 SINE Alu 1 313 -5 23 0 0 0 chr5 93759075 93759098 -109326434 + AT_rich Low_complexity Low_complexity 1 23 0 720 299 80 20 chr5 93759268 93759928 -109325604 + L1ME3A LINE L1 2931 3630 -2516 2440 54 0 19 chr5 93759928 93760241 -109325291 - AluY SINE Alu -4 307 1 287 304 103 41 chr5 93760391 93760815 -109324717 + MLT1G1 LTR MaLR 64 595 0 1027 266 105 36 chr5 93760877 93761343 -109324189 + L1ME3A LINE L1 5673 6170 0 390 346 78 8 chr5 93761358 93761615 -109323917 + L1ME3A LINE L1 4677 4951 -1195 360 339 74 35 chr5 93761625 93761855 -109323677 + L1ME3A LINE L1 5810 6048 -122 28 48 0 0 chr5 93762919 93762961 -109322571 + AT_rich Low_complexity Low_complexity 1 42 0 4634 126 31 0 chr5 93763240 93763978 -109321554 + L1PA15 LINE L1 5400 6160 -5 27 0 0 0 chr5 93764218 93764245 -109321287 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr5 93765066 93765088 -109320444 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 29 28 0 0 chr5 93765719 93765755 -109319777 + AT_rich Low_complexity Low_complexity 1 36 0 514 300 64 27 chr5 93765759 93765979 -109319553 - MIR SINE MIR -26 236 9 198 333 121 0 chr5 93765986 93766052 -109319480 - L2 LINE L2 -61 3211 3138 26 0 0 0 chr5 93766462 93766488 -109319044 + AT_rich Low_complexity Low_complexity 1 26 0 887 51 8 0 chr5 93766928 93767046 -109318486 - L1PA4 LINE L1 -3 6152 6034 21 57 0 0 chr5 93767961 93767996 -109317536 + AT_rich Low_complexity Low_complexity 1 35 0 239 288 34 0 chr5 93768311 93768370 -109317162 - MIR3 SINE MIR -43 165 105 29 0 0 0 chr5 93770539 93770568 -109314964 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 93771161 93771189 -109314343 + AT_rich Low_complexity Low_complexity 1 28 0 210 330 93 0 chr5 93772905 93773023 -109312509 + L2 LINE L2 3120 3248 -65 29 0 0 0 chr5 93773066 93773095 -109312437 + AT_rich Low_complexity Low_complexity 1 29 0 1948 162 0 0 chr5 93773902 93774210 -109311322 - AluSx SINE Alu -4 308 1 1601 169 3 24 chr5 93774424 93774778 -109310754 - AluJo SINE Alu 0 348 1 387 0 0 0 chr5 93774925 93774968 -109310564 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 247 200 31 15 chr5 93775720 93775785 -109309747 + MLT1L LTR MaLR 545 610 -5 21 0 0 0 chr5 93775987 93776008 -109309524 + AT_rich Low_complexity Low_complexity 1 21 0 1785 282 74 29 chr5 93776194 93777202 -109308330 + L1MEc LINE L1 742 1818 -4578 216 0 0 0 chr5 93777202 93777226 -109308306 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1785 282 74 29 chr5 93777226 93777467 -109308065 + L1MEc LINE L1 1818 2047 -4349 1038 457 3 0 chr5 93777467 93777767 -109307765 + AluJb SINE Alu 2 302 0 816 311 72 27 chr5 93778862 93779306 -109306226 + LTR16B LTR ERVL 1 464 0 540 294 38 42 chr5 93780647 93780912 -109304620 + Charlie8 DNA MER1_type 3 266 -2151 2119 132 7 0 chr5 93781073 93781383 -109304149 - AluSq SINE Alu -1 312 1 1585 169 4 18 chr5 93781847 93782120 -109303412 + AluJb SINE Alu 4 272 -40 2084 183 27 19 chr5 93782196 93782606 -109302926 - MSTB LTR MaLR -13 413 1 195 212 192 40 chr5 93782695 93782794 -109302738 - MIR SINE MIR -50 212 99 543 238 221 0 chr5 93782809 93782981 -109302551 - MLT1J1 LTR MaLR -236 210 1 21 0 0 0 chr5 93784431 93784452 -109301080 + AT_rich Low_complexity Low_complexity 1 21 0 222 35 0 0 chr5 93785867 93785877 -109299655 + (GA)n Simple_repeat Simple_repeat 2 11 -19 1933 93 10 31 chr5 93785877 93786005 -109299527 + AluSc SINE Alu 1 130 -179 1677 92 0 13 chr5 93786005 93786293 -109299239 + AluY SINE Alu 77 311 0 1933 93 10 31 chr5 93786293 93786455 -109299077 + AluSc SINE Alu 130 285 -24 222 35 0 0 chr5 93786455 93786473 -109299059 + (GA)n Simple_repeat Simple_repeat 10 30 0 371 260 0 29 chr5 93786475 93786567 -109298965 + GA-rich Low_complexity Low_complexity 1 94 -317 1460 116 151 8 chr5 93786567 93786818 -109298714 + AluSg1 SINE Alu 6 292 -17 371 260 0 29 chr5 93786818 93786899 -109298633 + GA-rich Low_complexity Low_complexity 94 411 0 742 134 0 43 chr5 93786901 93787088 -109298444 + (GGGA)n Simple_repeat Simple_repeat 1 179 0 307 238 0 33 chr5 93787109 93787231 -109298301 + GA-rich Low_complexity Low_complexity 3 120 0 201 322 74 41 chr5 93787433 93787554 -109297978 + L2 LINE L2 3184 3308 -5 1854 188 31 121 chr5 93787710 93788369 -109297163 - LTR9 LTR ERV1 0 612 18 260 328 8 15 chr5 93788618 93788749 -109296783 - L1MEc LINE L1 -3594 2621 2492 1664 208 22 19 chr5 93788775 93789136 -109296396 - MLT1A1 LTR MaLR 0 365 4 739 277 43 12 chr5 93789138 93789391 -109296141 - LTR33A LTR ERVL -6 517 257 328 250 129 89 chr5 93789662 93789725 -109295807 - L1MEc LINE L1 -3962 2434 2375 2433 65 0 7 chr5 93789725 93790035 -109295497 - AluY SINE Alu -3 308 1 328 250 129 89 chr5 93790035 93790251 -109295281 - L1MEc LINE L1 -4021 2375 2144 27 29 0 0 chr5 93790441 93790475 -109295057 + AT_rich Low_complexity Low_complexity 1 34 0 32 101 0 0 chr5 93790655 93790764 -109294768 + AT_rich Low_complexity Low_complexity 1 109 0 396 179 104 19 chr5 93791470 93791576 -109293956 + L1 LINE L1 2938 3052 -3094 6335 235 29 56 chr5 93791740 93793819 -109291713 + L1 LINE L1 3287 5309 -837 261 57 0 0 chr5 93795824 93795859 -109289673 + (TG)n Simple_repeat Simple_repeat 1 35 0 6712 208 62 21 chr5 93796264 93797983 -109287549 + L1 LINE L1 3465 5253 -893 7372 41 0 0 chr5 93797983 93798884 -109286648 + L1PA4 LINE L1 5254 6154 -1 2949 191 62 10 chr5 93798889 93800157 -109285375 + L1PB4 LINE L1 4474 5791 -365 258 287 11 0 chr5 93800136 93800230 -109285302 - L1MC4 LINE L1 -1334 6708 6614 * 239 89 0 0 chr5 93800252 93800297 -109285235 - L1M2 LINE L1 -502 5789 5745 218 189 0 0 chr5 93800297 93800334 -109285198 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 1386 182 28 32 chr5 93800363 93800706 -109284826 + L1PB4 LINE L1 5767 6121 -34 347 220 11 0 chr5 93800706 93800797 -109284735 + (TA)n Simple_repeat Simple_repeat 1 92 0 500 176 98 0 chr5 93800805 93800907 -109284625 - L1M2 LINE L1 -521 5791 5680 * 1972 252 81 37 chr5 93800903 93802033 -109283499 + L1M4 LINE L1 2235 3367 -2848 798 261 91 49 chr5 93802040 93802691 -109282841 + L1ME2 LINE L1 2463 3140 -3006 * 1248 275 43 15 chr5 93802672 93803138 -109282394 + L1ME2 LINE L1 5677 6155 -9 1027 222 23 119 chr5 93803326 93803722 -109281810 - MLT1A1 LTR MaLR -6 359 2 22 0 0 0 chr5 93803780 93803802 -109281730 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 93804128 93804156 -109281376 + AT_rich Low_complexity Low_complexity 1 28 0 4721 162 52 28 chr5 93804404 93805554 -109279978 - L1MA6 LINE L1 -1 6299 5130 3524 207 35 7 chr5 93805548 93806369 -109279163 + L1M4 LINE L1 4318 5161 -1054 * 1169 164 23 27 chr5 93808798 93809060 -109276472 - L1MA6 LINE L1 -3 6297 6037 23 0 0 0 chr5 93809091 93809114 -109276418 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr5 93809403 93809438 -109276094 + AT_rich Low_complexity Low_complexity 1 35 0 2106 104 0 41 chr5 93809797 93810113 -109275419 - AluSq SINE Alu -9 304 2 574 231 75 0 chr5 93810479 93810639 -109274893 + L1M4 LINE L1 5478 5649 -604 1719 135 0 15 chr5 93811313 93811580 -109273952 - AluSq SINE Alu -15 298 36 22 0 0 0 chr5 93811665 93811687 -109273845 + AT_rich Low_complexity Low_complexity 1 22 0 5275 196 188 21 chr5 93811834 93813107 -109272425 + MER52A LTR ERV1 271 1755 0 1658 181 35 0 chr5 93813107 93813382 -109272150 + MER1B DNA MER1_type 55 339 0 458 221 15 133 chr5 93813392 93813587 -109271945 - L1ME2 LINE L1 -285 5879 5708 609 187 13 13 chr5 93814051 93814206 -109271326 + CT-rich Low_complexity Low_complexity 2 156 0 311 254 0 0 chr5 93814453 93814516 -109271016 + MIR SINE MIR 83 145 -63 1047 205 111 52 chr5 93816408 93816813 -109268719 - HsTC2 DNA Tc2 -2 1896 1292 241 252 279 0 chr5 93816829 93816940 -109268592 - HsTC2 DNA Tc2 -1755 143 2 21 0 0 0 chr5 93818714 93818735 -109266797 + AT_rich Low_complexity Low_complexity 1 21 0 345 47 0 0 chr5 93818774 93818817 -109266715 + (TG)n Simple_repeat Simple_repeat 2 44 0 185 265 0 0 chr5 93819341 93819390 -109266142 + L2 LINE L2 3265 3313 0 189 211 0 0 chr5 93819636 93819688 -109265844 + (TAA)n Simple_repeat Simple_repeat 2 53 0 7411 37 0 0 chr5 93819772 93821373 -109264159 - L1PA4 LINE L1 -4 6151 4550 1205 220 164 7 chr5 93822400 93822705 -109262827 + MLT1A1 LTR MaLR 1 353 -12 22 0 0 0 chr5 93824113 93824135 -109261397 + AT_rich Low_complexity Low_complexity 1 22 0 660 251 0 6 chr5 93825763 93825926 -109259606 - AluJo SINE Alu -31 281 120 257 120 0 40 chr5 93825943 93825993 -109259539 - FLAM_A SINE Alu 0 133 86 2122 117 3 7 chr5 93826134 93826443 -109259089 - AluSx SINE Alu -4 308 1 256 219 0 0 chr5 93826596 93826660 -109258872 + L1MC4 LINE L1 6640 6703 -1339 2446 249 60 52 chr5 93826672 93827504 -109258028 - L1ME2 LINE L1 -581 5585 4738 2053 120 0 20 chr5 93827504 93827804 -109257728 - AluSg SINE Alu -16 294 1 2446 249 60 52 chr5 93827804 93828512 -109257020 - L1ME2 LINE L1 -1428 4738 4037 2991 187 72 0 chr5 93828518 93829075 -109256457 + LTR31 LTR ERV1 8 604 -15 276 253 30 84 chr5 93829081 93829247 -109256285 - L1ME2 LINE L1 -2116 4030 3874 1954 141 17 0 chr5 93829460 93829750 -109255782 + AluSq SINE Alu 1 295 -18 23 0 0 0 chr5 93829855 93829878 -109255654 + AT_rich Low_complexity Low_complexity 1 23 0 1955 152 0 0 chr5 93830501 93830790 -109254742 - AluSx SINE Alu -19 293 5 24 0 0 0 chr5 93830822 93830846 -109254686 + AT_rich Low_complexity Low_complexity 1 24 0 303 299 60 24 chr5 93831044 93831211 -109254321 - L1M4 LINE L1 -805 5341 5169 25 31 0 0 chr5 93831790 93831822 -109253710 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 93832022 93832050 -109253482 + AT_rich Low_complexity Low_complexity 1 28 0 3548 227 42 21 chr5 93832053 93833346 -109252186 - L1MB7 LINE L1 -13 6171 4856 279 0 0 0 chr5 93833351 93833382 -109252150 + (TG)n Simple_repeat Simple_repeat 2 32 0 30 45 0 0 chr5 93833382 93833426 -109252106 + AT_rich Low_complexity Low_complexity 1 44 0 229 261 0 0 chr5 93835043 93835089 -109250443 + (TG)n Simple_repeat Simple_repeat 2 47 0 2457 120 11 8 chr5 93835148 93835522 -109250010 + THE1C LTR MaLR 1 375 0 2563 267 83 15 chr5 93835575 93836358 -109249174 - MER21B LTR ERV1 -9 854 19 380 272 0 22 chr5 93836380 93836472 -109249060 - MER21B LTR ERV1 -773 90 1 217 232 71 0 chr5 93838773 93838829 -109246703 - L2 LINE L2 -4 3268 3209 280 231 137 143 chr5 93839230 93839347 -109246185 - MER5A DNA MER1_type 0 189 72 2165 117 0 3 chr5 93839347 93839645 -109245887 - AluSx SINE Alu -13 299 3 280 231 137 143 chr5 93839645 93839709 -109245823 - MER5A DNA MER1_type -117 72 9 192 125 0 0 chr5 93839879 93839911 -109245621 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 1935 187 52 48 chr5 93840521 93840982 -109244550 + MER66B LTR ERV1 24 486 0 4744 184 32 24 chr5 93840998 93841404 -109244128 + L1MA9 LINE L1 4591 4992 -1320 2674 111 0 5 chr5 93841404 93841781 -109243751 - THE1C LTR MaLR 0 375 1 4744 184 32 24 chr5 93841781 93843082 -109242450 + L1MA9 LINE L1 4992 6312 0 235 329 13 0 chr5 93843327 93843406 -109242126 + L1ME1 LINE L1 4751 4830 -1316 818 172 19 0 chr5 93843528 93843685 -109241847 - L1MA3 LINE L1 -197 6108 5949 * 2770 281 42 24 chr5 93843683 93844868 -109240664 + L1ME1 LINE L1 4964 6331 -3 1261 297 74 18 chr5 93844956 93845629 -109239903 + L1MC4a LINE L1 5287 5997 -1811 1048 268 18 43 chr5 93845616 93846015 -109239517 + L1MA9 LINE L1 5886 6274 -38 * 361 239 127 35 chr5 93846030 93846227 -109239305 + L1MC4a LINE L1 5974 6188 -1620 227 192 0 0 chr5 93846662 93846714 -109238818 + T-rich Low_complexity Low_complexity 1 52 0 7530 36 0 0 chr5 93846716 93848319 -109237213 - L1PA4 LINE L1 -3 6152 4550 1205 220 164 7 chr5 93849346 93849651 -109235881 + MLT1A1 LTR MaLR 1 353 -12 22 0 0 0 chr5 93851058 93851080 -109234452 + AT_rich Low_complexity Low_complexity 1 22 0 584 241 129 35 chr5 93851806 93852103 -109233429 - MLT1E LTR MaLR -113 480 157 2230 81 0 3 chr5 93852103 93852401 -109233131 - AluY SINE Alu -14 297 1 584 241 129 35 chr5 93852401 93852447 -109233085 - MLT1E LTR MaLR -436 157 117 6758 227 23 26 chr5 93852452 93854327 -109231205 + L1MA9 LINE L1 2315 4184 -1962 30 45 0 0 chr5 93954665 93954709 -109130823 + AT_rich Low_complexity Low_complexity 1 44 0 29 28 0 0 chr5 93955035 93955071 -109130461 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 93956043 93956080 -109129452 + AT_rich Low_complexity Low_complexity 1 37 0 3876 223 38 18 chr5 93956685 93957941 -109127591 + L1MA9 LINE L1 4965 6244 -68 498 196 19 9 chr5 93958080 93958187 -109127345 + MLT1B LTR MaLR 283 390 0 350 287 31 63 chr5 93958193 93958416 -109127116 - L1MEc LINE L1 -4023 2373 2158 25 31 0 0 chr5 93958658 93958690 -109126842 + AT_rich Low_complexity Low_complexity 1 32 0 2827 230 161 8 chr5 93959184 93960000 -109125532 - THE1B-int LTR MaLR -693 958 2 1811 165 31 11 chr5 93960002 93960359 -109125173 - THE1B LTR MaLR 0 364 1 629 216 47 7 chr5 93960527 93960675 -109124857 + L1MCa LINE L1 269 422 -6004 204 111 0 0 chr5 93960688 93960724 -109124808 + (A)n Simple_repeat Simple_repeat 1 36 0 1742 218 103 8 chr5 93960747 93961330 -109124202 + L1MC3 LINE L1 7125 7784 -1 26 64 0 0 chr5 93961445 93961492 -109124040 + AT_rich Low_complexity Low_complexity 1 47 0 213 113 19 38 chr5 93962748 93962801 -109122731 + (TA)n Simple_repeat Simple_repeat 2 53 0 872 218 8 21 chr5 93963067 93963306 -109122226 - AluJb SINE Alu -72 240 5 210 37 0 0 chr5 93963533 93963560 -109121972 + (CA)n Simple_repeat Simple_repeat 2 28 0 227 24 0 98 chr5 93963567 93963608 -109121924 + (GA)n Simple_repeat Simple_repeat 2 38 0 1633 165 7 0 chr5 93963608 93963887 -109121645 - AluSp SINE Alu -30 283 3 3725 259 4 12 chr5 93964338 93965485 -109120047 + L1P LINE L1 4210 5347 -799 1353 261 30 87 chr5 93965640 93966544 -109118988 + L1MB7 LINE L1 4315 5175 -971 1533 223 79 13 chr5 93966573 93966954 -109118578 + MLT2D LTR ERVL 9 414 0 582 230 24 49 chr5 93966959 93967214 -109118318 + L1MB7 LINE L1 5175 5427 -753 347 167 15 0 chr5 93967226 93967292 -109118240 + L1MB7 LINE L1 5889 5955 -229 6120 234 19 8 chr5 93967459 93968758 -109116774 + L1PA12 LINE L1 889 2201 -5380 2142 266 28 16 chr5 93968860 93969498 -109116034 - L1M3f LINE L1 -4673 655 10 26 50 0 0 chr5 93970038 93970078 -109115454 + AT_rich Low_complexity Low_complexity 1 40 0 250 284 45 0 chr5 93971348 93971436 -109114096 - MIR SINE MIR -19 243 152 29 0 0 0 chr5 93971616 93971645 -109113887 + AT_rich Low_complexity Low_complexity 1 29 0 1276 218 55 25 chr5 93971698 93972060 -109113472 + Charlie1b DNA MER1_type 151 523 0 230 260 0 0 chr5 93973200 93973250 -109112282 - L1PA12 LINE L1 -7521 60 11 183 184 0 0 chr5 93973842 93973880 -109111652 + (TA)n Simple_repeat Simple_repeat 1 38 0 31 26 0 0 chr5 93974714 93974752 -109110780 + AT_rich Low_complexity Low_complexity 1 38 0 23 78 0 0 chr5 93975748 93975799 -109109733 + AT_rich Low_complexity Low_complexity 1 51 0 315 354 50 11 chr5 93975974 93976155 -109109377 - MIR SINE MIR -1 261 74 22 0 0 0 chr5 93976190 93976212 -109109320 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 93976474 93976495 -109109037 + AT_rich Low_complexity Low_complexity 1 21 0 820 166 73 13 chr5 93976627 93976778 -109108754 - AluJb SINE Alu -22 290 131 36 62 0 0 chr5 93978024 93978088 -109107444 + AT_rich Low_complexity Low_complexity 1 64 0 242 355 58 13 chr5 93978253 93978408 -109107124 - MIR SINE MIR -1 261 100 1720 176 27 52 chr5 93980701 93981105 -109104427 + MSTD LTR MaLR 1 394 -2 24 32 0 0 chr5 93981454 93981485 -109104047 + AT_rich Low_complexity Low_complexity 1 31 0 243 279 15 0 chr5 93981982 93982050 -109103482 + L1M4 LINE L1 2403 2471 -3675 9697 201 35 24 chr5 93982052 93984559 -109100973 + L1PA15 LINE L1 2840 5319 -846 1990 133 0 0 chr5 93984559 93984838 -109100694 + AluSx SINE Alu 1 279 -33 241 80 20 20 chr5 93984839 93984889 -109100643 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 9697 201 35 24 chr5 93984889 93985523 -109100009 + L1PA15 LINE L1 5319 6018 -147 2117 136 0 3 chr5 93985523 93985833 -109099699 + AluSg SINE Alu 2 310 0 9697 201 35 24 chr5 93985833 93985983 -109099549 + L1PA15 LINE L1 6018 6165 0 396 274 35 17 chr5 93986082 93986312 -109099220 + L1M4 LINE L1 3256 3489 -2657 1866 225 18 12 chr5 93986332 93986732 -109098800 + L1MCa LINE L1 21 422 -6004 2194 194 189 11 chr5 93986748 93987376 -109098156 + L1MC3 LINE L1 7031 7770 -15 767 245 113 9 chr5 93987384 93987702 -109097830 + MER119 DNA MER1_type 232 582 -1 365 238 50 30 chr5 93987730 93987831 -109097701 + Charlie1b DNA MER1_type 1 103 -420 29 0 0 0 chr5 93987851 93987880 -109097652 + AT_rich Low_complexity Low_complexity 1 29 0 1447 214 53 23 chr5 93987902 93988295 -109097237 + Charlie1b DNA MER1_type 119 523 0 255 61 0 0 chr5 93989550 93989583 -109095949 + (TG)n Simple_repeat Simple_repeat 2 34 0 2058 119 3 0 chr5 93989583 93989868 -109095664 - AluSq SINE Alu -27 286 1 188 318 0 0 chr5 93990666 93990710 -109094822 - L2 LINE L2 -17 3255 3212 2058 127 3 16 chr5 93990972 93991287 -109094245 + AluSp SINE Alu 1 311 -2 21 95 0 0 chr5 93992346 93992409 -109093123 + AT_rich Low_complexity Low_complexity 1 63 0 390 84 56 70 chr5 93993830 93993901 -109091631 - MSTA LTR MaLR -2 426 357 991 149 11 28 chr5 93993901 93994082 -109091450 + AluSg/x SINE Alu 133 310 0 522 143 0 0 chr5 93994084 93994175 -109091357 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 189 0 0 0 chr5 93994209 93994230 -109091302 + (GAAAA)n Simple_repeat Simple_repeat 2 22 0 1975 153 42 8 chr5 93994230 93994579 -109090953 - MSTA LTR MaLR -64 364 1 291 73 55 0 chr5 93995922 93995977 -109089555 + (TA)n Simple_repeat Simple_repeat 2 59 0 2107 95 17 20 chr5 93997268 93997562 -109087970 - AluSc SINE Alu -11 298 6 266 196 21 41 chr5 93998986 93999083 -109086449 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 34 79 0 0 chr5 93999285 93999361 -109086171 + AT_rich Low_complexity Low_complexity 1 76 0 198 0 0 0 chr5 94001562 94001584 -109083948 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2252 153 25 5 chr5 94001626 94002031 -109083501 - L1MA2 LINE L1 0 6304 5892 27 0 0 0 chr5 94002189 94002216 -109083316 + AT_rich Low_complexity Low_complexity 1 27 0 779 306 118 35 chr5 94002368 94003001 -109082531 - L1ME3A LINE L1 -174 6065 5380 234 326 66 38 chr5 94003183 94003471 -109082061 - L1ME3A LINE L1 -1052 5163 4868 3112 291 82 38 chr5 94003817 94006886 -109078646 - L1MEc LINE L1 -1497 4718 1541 401 359 29 47 chr5 94006887 94007163 -109078369 - L1MEc LINE L1 -4910 1307 1037 361 306 111 30 chr5 94007327 94007476 -109078056 - L1MEc LINE L1 -5474 922 752 1785 151 11 0 chr5 94007476 94007747 -109077785 - AluSx SINE Alu -3 309 36 361 306 111 30 chr5 94007747 94007796 -109077736 - L1MEc LINE L1 -5644 752 708 913 180 6 60 chr5 94007821 94008004 -109077528 - AluJo SINE Alu -53 259 87 303 372 105 40 chr5 94008182 94008459 -109077073 - L1MEc LINE L1 -6042 354 60 27 0 0 0 chr5 94008486 94008513 -109077019 + AT_rich Low_complexity Low_complexity 1 27 0 221 356 27 0 chr5 94009171 94009244 -109076288 - MIR SINE MIR -154 108 34 23 86 0 0 chr5 94010550 94010608 -109074924 + AT_rich Low_complexity Low_complexity 1 58 0 420 274 126 91 chr5 94011157 94011387 -109074145 + MIR SINE MIR 5 242 -20 30 0 0 0 chr5 94011426 94011456 -109074076 + AT_rich Low_complexity Low_complexity 1 30 0 2813 3 0 0 chr5 94011585 94011891 -109073641 + AluYa5 SINE Alu 1 306 -5 21 0 0 0 chr5 94014208 94014229 -109071303 + AT_rich Low_complexity Low_complexity 1 21 0 226 315 0 63 chr5 94015655 94015798 -109069734 + MER94 DNA DNA 1 134 0 1810 141 30 30 chr5 94015910 94016209 -109069323 + AluSx SINE Alu 1 299 -13 244 219 16 0 chr5 94016368 94016432 -109069100 - L1ME2 LINE L1 -15 6149 6085 1895 203 45 0 chr5 94016503 94016862 -109068670 + MER52A LTR ERV1 1381 1755 0 2574 138 69 19 chr5 94016862 94017385 -109068147 - Tigger3(Golem) DNA MER2_type -203 2826 2278 525 256 0 45 chr5 94017356 94017397 -109068135 - Tigger3(Golem) DNA MER2_type -1103 128 87 * 2123 67 24 34 chr5 94017397 94017694 -109067838 - AluY SINE Alu -17 294 1 525 256 0 45 chr5 94017694 94017785 -109067747 - Tigger3(Golem) DNA MER2_type -1144 87 2 271 211 0 0 chr5 94018304 94018356 -109067176 - MIR SINE MIR -50 212 161 1795 136 17 3 chr5 94018379 94018666 -109066866 - AluSx SINE Alu -21 291 1 1384 230 7 7 chr5 94018732 94019032 -109066500 + AluJo SINE Alu 6 305 -7 2102 132 0 0 chr5 94019130 94019425 -109066107 + AluSx SINE Alu 1 295 -17 423 321 43 7 chr5 94019775 94019915 -109065617 - MIR SINE MIR -114 148 4 2192 57 0 21 chr5 94020938 94021316 -109064216 - AluY SINE Alu 0 381 10 21 57 0 0 chr5 94021972 94022007 -109063525 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr5 94023202 94023237 -109062295 + AT_rich Low_complexity Low_complexity 1 35 0 2441 51 0 3 chr5 94023322 94023633 -109061899 + AluY SINE Alu 1 310 -1 833 318 52 4 chr5 94024140 94024407 -109061125 - L2 LINE L2 -684 2630 2351 34 0 0 0 chr5 94025196 94025230 -109060302 + AT_rich Low_complexity Low_complexity 1 34 0 22 56 0 0 chr5 94025252 94025288 -109060244 + AT_rich Low_complexity Low_complexity 1 36 0 2331 134 63 5 chr5 94025345 94025755 -109059777 - MER61C LTR ERV1 0 434 1 4166 215 34 13 chr5 94025809 94027275 -109058257 + L1MA9 LINE L1 4779 6274 -38 428 305 111 18 chr5 94027868 94028094 -109057438 - MIR SINE MIR -8 254 8 201 262 131 0 chr5 94028294 94028355 -109057177 + L2 LINE L2 3203 3271 -1 3434 188 29 1 chr5 94028424 94029114 -109056418 - MER67C LTR ERV1 -1 709 1 300 271 35 0 chr5 94029198 94029283 -109056249 + MIR3 SINE MIR 90 177 -31 240 35 0 0 chr5 94029600 94029629 -109055903 + (CA)n Simple_repeat Simple_repeat 2 30 0 192 40 0 0 chr5 94030151 94030176 -109055356 + (TG)n Simple_repeat Simple_repeat 2 26 0 756 236 23 14 chr5 94030790 94031010 -109054522 - L1MB4 LINE L1 -1 6179 5958 390 121 15 0 chr5 94031049 94031115 -109054417 - L1MB4 LINE L1 -229 5955 5889 727 178 31 58 chr5 94031127 94031382 -109054150 - L1MB4 LINE L1 -753 5427 5175 1755 212 79 5 chr5 94031387 94031765 -109053767 - MLT2D LTR ERVL 0 414 9 2051 228 38 81 chr5 94031808 94032694 -109052838 - L1MB4 LINE L1 -984 5162 4315 191 421 28 0 chr5 94032767 94032874 -109052658 + L3 LINE CR1 1437 1546 -31 198 0 0 0 chr5 94033085 94033107 -109052425 + (TG)n Simple_repeat Simple_repeat 1 22 0 195 42 0 0 chr5 94033106 94033130 -109052402 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 271 292 144 58 chr5 94033698 94033955 -109051577 + LTR33 LTR ERVL 9 287 -234 261 336 23 0 chr5 94035023 94035154 -109050378 - MER94 DNA DNA 0 134 1 249 280 120 0 chr5 94035216 94035316 -109050216 - MER53 DNA DNA -75 114 3 21 0 0 0 chr5 94035441 94035462 -109050070 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr5 94035503 94035543 -109049989 + AT_rich Low_complexity Low_complexity 1 40 0 2030 109 3 24 chr5 94035543 94035837 -109049695 - AluSx SINE Alu -24 288 1 21 0 0 0 chr5 94036606 94036627 -109048905 + AT_rich Low_complexity Low_complexity 1 21 0 3798 147 13 2 chr5 94036681 94037299 -109048233 - L1PA13 LINE L1 -3 6160 5536 1864 171 7 0 chr5 94037923 94038233 -109047299 - AluSx SINE Alu 0 312 1 1322 227 44 27 chr5 94038424 94038790 -109046742 + MLT2D LTR ERVL 1 520 -34 24 0 0 0 chr5 94040558 94040582 -109044950 + AT_rich Low_complexity Low_complexity 1 24 0 1908 124 7 0 chr5 94040929 94041212 -109044320 + AluSg SINE Alu 24 308 -2 581 230 136 19 chr5 94042361 94042574 -109042958 + MIR SINE MIR 1 238 -24 181 349 0 0 chr5 94042541 94042604 -109042928 + L2 LINE L2 3251 3313 0 * 22 56 0 0 chr5 94044574 94044610 -109040922 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 94044795 94044818 -109040714 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 94045762 94045800 -109039732 + AT_rich Low_complexity Low_complexity 1 38 0 182 382 75 54 chr5 94046022 94046263 -109039269 - L2 LINE L2 -21 3251 3006 24 53 0 0 chr5 94047127 94047165 -109038367 + AT_rich Low_complexity Low_complexity 1 38 0 2180 146 22 0 chr5 94048572 94048928 -109036604 + THE1B LTR MaLR 1 364 0 4117 212 152 4 chr5 94048930 94049894 -109035638 + THE1B-int LTR MaLR 3 1108 -543 964 211 10 10 chr5 94049895 94050089 -109035443 + AluJb SINE Alu 92 285 -27 370 109 0 0 chr5 94050239 94050294 -109035238 - L1MC3 LINE L1 -1225 6560 6506 2331 220 90 3 chr5 94050349 94050466 -109035066 + L1MC3 LINE L1 6724 6829 -956 279 0 0 0 chr5 94050466 94050497 -109035035 + (CA)n Simple_repeat Simple_repeat 2 32 0 2331 220 90 3 chr5 94050497 94050970 -109034562 + L1MC3 LINE L1 6829 7365 -420 1568 160 61 0 chr5 94051002 94051314 -109034218 + L1MC3 LINE L1 7447 7777 -8 1815 253 38 26 chr5 94051332 94051834 -109033698 + LTR53 LTR ERVL 1 508 -11 478 339 73 34 chr5 94052731 94052937 -109032595 + L2 LINE L2 917 1144 -2170 2236 104 3 40 chr5 94052937 94053313 -109032219 + THE1B LTR MaLR 3 364 0 478 339 73 34 chr5 94053313 94053460 -109032072 + L2 LINE L2 1144 1284 -2030 315 224 0 0 chr5 94053481 94053539 -109031993 - MLT1I LTR MaLR -2 407 350 183 80 0 0 chr5 94053548 94053573 -109031959 + (CAAAAA)n Simple_repeat Simple_repeat 3 27 0 510 213 142 7 chr5 94053866 94054021 -109031511 - MER53 DNA DNA -13 176 1 213 94 0 0 chr5 94054579 94054611 -109030921 + (T)n Simple_repeat Simple_repeat 1 32 0 188 313 73 52 chr5 94054672 94054768 -109030764 + L2 LINE L2 3173 3270 -2 1046 165 15 5 chr5 94056060 94056260 -109029272 - L1PA15 LINE L1 0 6165 5964 2098 103 7 0 chr5 94057411 94057692 -109027840 + AluSp SINE Alu 1 283 -30 372 59 0 0 chr5 94057692 94057743 -109027789 + (TC)n Simple_repeat Simple_repeat 2 52 0 214 231 0 0 chr5 94057744 94057783 -109027749 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 152 0 0 chr5 94057810 94057843 -109027689 - MIR SINE MIR -10 252 220 221 393 28 9 chr5 94057882 94057989 -109027543 - MIR SINE MIR -137 125 17 1828 159 10 3 chr5 94057996 94058298 -109027234 + AluSx SINE Alu 1 304 -8 963 76 8 0 chr5 94059665 94059796 -109025736 + L1MA1 LINE L1 5863 5994 -308 1534 138 131 4 chr5 94059991 94060251 -109025281 - AluSx SINE Alu -8 294 2 31 0 0 0 chr5 94060299 94060330 -109025202 + AT_rich Low_complexity Low_complexity 1 31 0 277 342 27 34 chr5 94060569 94060718 -109024814 + L1MC/D LINE L1 5444 5591 -2217 23 54 0 0 chr5 94060887 94060924 -109024608 + AT_rich Low_complexity Low_complexity 1 37 0 29 0 0 0 chr5 94061616 94061645 -109023887 + AT_rich Low_complexity Low_complexity 1 29 0 1534 138 131 4 chr5 94061692 94061952 -109023580 + AluSx SINE Alu 2 294 -8 407 314 101 21 chr5 94063319 94063606 -109021926 + L2 LINE L2 1740 2049 -1265 7811 16 1 0 chr5 94063607 94064585 -109020947 - L1HS LINE L1 0 6155 5177 1598 26 0 0 chr5 94064583 94064776 -109020756 + L1HS LINE L1 4985 5177 -969 * 511 234 7 26 chr5 94065822 94065976 -109019556 + L1M4 LINE L1 2933 3083 -3063 439 296 56 36 chr5 94065983 94066179 -109019353 - MLT1J LTR MaLR -309 202 3 495 343 137 4 chr5 94066402 94066679 -109018853 - L2 LINE L2 -2 3311 2998 4002 240 50 16 chr5 94066907 94067279 -109018253 - L1MB2 LINE L1 -2 6169 5811 324 0 0 0 chr5 94067279 94067315 -109018217 + (TA)n Simple_repeat Simple_repeat 2 37 0 4002 240 50 16 chr5 94067315 94069091 -109016441 - L1MB2 LINE L1 -360 5811 3938 954 232 58 4 chr5 94069088 94069329 -109016203 - L1 LINE L1 -2082 4064 3811 * 306 0 0 0 chr5 94069488 94069522 -109016010 + (TG)n Simple_repeat Simple_repeat 1 34 0 195 281 0 31 chr5 94069587 94069651 -109015881 + MIR SINE MIR 96 157 -105 4126 212 40 39 chr5 94069742 94070853 -109014679 - L1MC3 LINE L1 0 7785 6673 1252 264 5 26 chr5 94070962 94071480 -109014052 + L1MA6 LINE L1 2035 2695 -4154 677 190 19 6 chr5 94071764 94071925 -109013607 + L1MA6 LINE L1 5480 5646 -1202 2710 182 50 47 chr5 94071939 94072368 -109013164 + L1MA6 LINE L1 5598 6024 -978 2075 134 13 7 chr5 94072368 94072675 -109012857 + AluSp SINE Alu 1 309 -4 2710 182 50 47 chr5 94072675 94073284 -109012248 + L1MA6 LINE L1 6024 6642 -360 901 220 60 114 chr5 94073305 94073991 -109011541 + MER52A LTR ERV1 663 1450 -305 647 270 0 0 chr5 94074015 94074178 -109011354 + MER52A LTR ERV1 1593 1755 0 1442 198 11 36 chr5 94074184 94074542 -109010990 + L1MA6 LINE L1 6651 6999 -3 48 60 0 0 chr5 94074697 94074780 -109010752 + AT_rich Low_complexity Low_complexity 1 83 0 1222 229 75 27 chr5 94074976 94075348 -109010184 + MLT1B LTR MaLR 1 390 0 1579 168 34 0 chr5 94075525 94075787 -109009745 + AluJb SINE Alu 5 275 -37 288 0 0 0 chr5 94075796 94075828 -109009704 + (TAA)n Simple_repeat Simple_repeat 2 33 0 414 241 80 37 chr5 94076078 94076265 -109009267 + L1ME LINE L1 919 1113 -5092 1702 169 55 0 chr5 94076353 94076468 -109009064 + AluJo SINE Alu 3 110 -202 288 0 0 0 chr5 94076468 94076500 -109009032 + (CA)n Simple_repeat Simple_repeat 2 33 0 1702 169 55 0 chr5 94076500 94076674 -109008858 + AluJo SINE Alu 110 308 -4 240 331 24 12 chr5 94076908 94077074 -109008458 + HAL1 LINE L1 1426 1593 -914 25 31 0 0 chr5 94077238 94077270 -109008262 + AT_rich Low_complexity Low_complexity 1 32 0 381 325 66 16 chr5 94077492 94077735 -109007797 + L1ME LINE L1 2119 2373 -4023 1177 245 73 45 chr5 94077741 94078190 -109007342 - MLT1C LTR MaLR 0 467 6 375 248 116 0 chr5 94078195 94078316 -109007216 - MLT1C-int LTR MaLR 0 1371 1237 254 311 73 7 chr5 94078388 94078677 -109006855 + L1ME LINE L1 3241 3548 -2667 2458 164 80 0 chr5 94078737 94079295 -109006237 + L1MA9 LINE L1 5146 5742 -570 537 186 24 1 chr5 94079368 94079594 -109005938 + L1MA9 LINE L1 6020 6308 -4 707 272 88 42 chr5 94079656 94079831 -109005701 + L1ME LINE L1 3604 3769 -2446 378 0 0 0 chr5 94079831 94079873 -109005659 + (TG)n Simple_repeat Simple_repeat 1 42 0 1835 143 0 4 chr5 94079873 94080153 -109005379 - AluSx SINE Alu -33 279 1 707 272 88 42 chr5 94080153 94080451 -109005081 + L1ME LINE L1 3768 4100 -2115 21 0 0 0 chr5 94081294 94081315 -109004217 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 94081371 94081395 -109004137 + AT_rich Low_complexity Low_complexity 1 24 0 1467 158 3 87 chr5 94081399 94081722 -109003810 - AluJb SINE Alu -15 297 2 21 82 0 0 chr5 94081827 94081876 -109003656 + AT_rich Low_complexity Low_complexity 1 49 0 1375 146 126 3 chr5 94081937 94082231 -109003301 - L1MA8 LINE L1 -8 6283 5954 6339 170 45 33 chr5 94082337 94083014 -109002518 - L1MA4 LINE L1 -296 6186 5519 1594 194 0 14 chr5 94083014 94083308 -109002224 - AluJo SINE Alu -22 290 1 6339 170 45 33 chr5 94083308 94084738 -109000794 - L1MA4 LINE L1 -963 5519 4032 7588 29 0 1 chr5 94084746 94086251 -108999281 - L1PA3 LINE L1 0 6155 4653 3626 23 0 0 chr5 94086251 94086679 -108998853 + L1PA3 LINE L1 4221 4648 -1498 2388 208 47 18 chr5 94086724 94087379 -108998153 - L1MA4 LINE L1 -2344 3984 3311 391 86 0 0 chr5 94087596 94087654 -108997878 - L1PA16 LINE L1 -9 6157 6100 1159 258 42 67 chr5 94087657 94087926 -108997606 - L1MA4 LINE L1 -3005 3323 3049 2035 105 0 36 chr5 94087926 94088230 -108997302 + AluSc SINE Alu 3 295 -14 1159 258 42 67 chr5 94088230 94088622 -108996910 - L1MA4 LINE L1 -3279 3049 2678 35 78 0 0 chr5 94088663 94088740 -108996792 + AT_rich Low_complexity Low_complexity 1 77 0 1219 240 37 31 chr5 94088741 94089309 -108996223 - L1MA4 LINE L1 -3653 2675 2095 * 6053 213 43 11 chr5 94089299 94090872 -108994660 - L1MA4 LINE L1 -4065 1263 3 26 50 0 0 chr5 94091402 94091442 -108994090 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 94092201 94092222 -108993310 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 94092357 94092392 -108993140 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 94092712 94092742 -108992790 + AT_rich Low_complexity Low_complexity 1 30 0 286 258 86 43 chr5 94093191 94093284 -108992248 - MER5A DNA MER1_type -84 105 9 210 212 136 30 chr5 94094670 94094736 -108990796 + L3 LINE CR1 643 715 -862 345 198 0 0 chr5 94095317 94095408 -108990124 + (CA)n Simple_repeat Simple_repeat 2 92 0 290 115 19 0 chr5 94095990 94096042 -108989490 + (TA)n Simple_repeat Simple_repeat 1 53 0 444 327 27 0 chr5 94096931 94097081 -108988451 + MIR SINE MIR 79 232 -30 2143 117 0 0 chr5 94097115 94097489 -108988043 + AluSx SINE Alu 1 374 0 208 302 0 0 chr5 94098330 94098373 -108987159 - MIR SINE MIR -213 49 7 3273 236 41 5 chr5 94099974 94100928 -108984604 - L1 LINE L1 -2820 3326 2339 580 167 0 0 chr5 94100924 94101026 -108984506 + L1MA6 LINE L1 5812 5913 -387 * 785 243 33 0 chr5 94101050 94101260 -108984272 + L1MA6 LINE L1 6084 6300 0 26 30 0 0 chr5 94102152 94102185 -108983347 + AT_rich Low_complexity Low_complexity 1 33 0 1743 224 65 25 chr5 94102423 94103356 -108982176 + L1MC2 LINE L1 2 900 -5007 1917 219 28 176 chr5 94103357 94103959 -108981573 + MLT2B3 LTR ERVL 1 513 -2 2902 213 198 16 chr5 94103971 94105068 -108980464 + L1MC2 LINE L1 948 2244 -4182 3294 258 71 43 chr5 94105091 94106664 -108978868 + L1MC2 LINE L1 2463 4080 -2346 4429 212 49 37 chr5 94106669 94108176 -108977356 + L1MC2 LINE L1 4275 5762 -862 2776 10 0 0 chr5 94108176 94108482 -108977050 + AluYa5 SINE Alu 1 306 -5 4429 212 49 37 chr5 94108482 94108578 -108976954 + L1MC2 LINE L1 5762 5855 -769 2040 137 26 37 chr5 94108578 94108957 -108976575 + THE1C LTR MaLR 1 375 0 4429 212 49 37 chr5 94108957 94109651 -108975881 + L1MC2 LINE L1 5855 6598 -26 285 359 47 16 chr5 94110197 94110325 -108975207 - L2 LINE L2 -3 3269 3138 22 0 0 0 chr5 94110657 94110679 -108974853 + AT_rich Low_complexity Low_complexity 1 22 0 831 199 6 24 chr5 94110784 94110950 -108974582 + Tigger1 DNA MER2_type 1 163 -2255 * 1076 170 42 24 chr5 94110931 94111143 -108974389 + Tigger1 DNA MER2_type 2202 2417 -1 2117 98 0 11 chr5 94111770 94112057 -108973475 + AluSx SINE Alu 14 297 -15 3858 26 2 0 chr5 94112683 94113138 -108972394 + L1PA3 LINE L1 5700 6155 0 683 245 137 54 chr5 94113322 94113657 -108971875 - MLT1A2 LTR MaLR -11 363 1 12306 196 15 8 chr5 94114878 94114907 -108970625 - L1PA14 LINE L1 -3 7596 7569 1854 144 174 8 chr5 94114907 94115274 -108970258 - MSTA LTR MaLR 0 428 1 12306 196 15 8 chr5 94115274 94118683 -108966849 - L1PA14 LINE L1 -30 7569 4145 15941 156 109 3 chr5 94118683 94121399 -108964133 - L1PA14 LINE L1 -4566 3015 11 234 208 0 0 chr5 94121972 94122025 -108963507 + (TA)n Simple_repeat Simple_repeat 1 53 0 33 56 0 0 chr5 94122858 94122912 -108962620 + AT_rich Low_complexity Low_complexity 1 54 0 30 45 0 0 chr5 94123219 94123263 -108962269 + AT_rich Low_complexity Low_complexity 1 44 0 300 220 90 0 chr5 94123990 94124090 -108961442 - MER5C DNA MER1_type -50 274 166 22 0 0 0 chr5 94124551 94124573 -108960959 + AT_rich Low_complexity Low_complexity 1 22 0 235 281 16 0 chr5 94124738 94124802 -108960730 - MIR3 SINE MIR -18 190 126 586 276 136 71 chr5 94124850 94125379 -108960153 + MLT1H LTR MaLR 8 528 -27 198 0 0 0 chr5 94125635 94125657 -108959875 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7168 33 0 0 chr5 94125657 94126509 -108959023 - L1PA3 LINE L1 -18 6137 5286 11479 26 3 1 chr5 94126509 94127886 -108957646 + L1PA3 LINE L1 3930 5308 -838 30 0 0 0 chr5 94129243 94129273 -108956259 + AT_rich Low_complexity Low_complexity 1 30 0 279 376 89 19 chr5 94129841 94130165 -108955367 + HAL1 LINE L1 271 617 -1890 252 246 0 0 chr5 94130208 94130265 -108955267 + (CA)n Simple_repeat Simple_repeat 2 58 0 641 301 134 42 chr5 94130289 94131126 -108954406 + HAL1 LINE L1 657 1570 -937 202 61 61 0 chr5 94131174 94131207 -108954325 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 328 331 128 40 chr5 94131229 94131332 -108954200 + HAL1 LINE L1 1631 1724 -783 2314 107 0 3 chr5 94131332 94131641 -108953891 + AluSx SINE Alu 1 308 -4 328 331 128 40 chr5 94131641 94131788 -108953744 + HAL1 LINE L1 1724 1903 -604 21 36 0 0 chr5 94131908 94131936 -108953596 + AT_rich Low_complexity Low_complexity 1 28 0 1450 198 29 10 chr5 94132173 94132486 -108953046 - L1MC1 LINE L1 -1 6332 6014 280 279 101 34 chr5 94132825 94133033 -108952499 - L1MEc LINE L1 -4640 1756 1535 245 250 0 0 chr5 94133343 94133399 -108952133 + CT-rich Low_complexity Low_complexity 1 56 0 1198 249 50 29 chr5 94133910 94134252 -108951280 + MLT1A1 LTR MaLR 1 349 -16 2216 135 0 0 chr5 94135389 94135700 -108949832 - AluSq SINE Alu -2 311 1 922 214 46 53 chr5 94136074 94136378 -108949154 + L1MA9 LINE L1 5760 6061 -251 * 40528 68 7 2 chr5 94136375 94142495 -108943037 + L1PA5 LINE L1 3 6151 -3 1267 156 26 26 chr5 94142495 94142562 -108942970 + L1MA9 LINE L1 6044 6110 -202 2935 194 27 10 chr5 94142562 94143156 -108942376 - MER6A DNA MER2_type -1 604 1 1267 156 26 26 chr5 94143156 94143355 -108942177 + L1MA9 LINE L1 6109 6312 0 1697 366 35 12 chr5 94143809 94144662 -108940870 + HERVL LTR ERVL 689 1561 -3435 1911 344 76 25 chr5 94144712 94146398 -108939134 + HERVL LTR ERVL 1708 3487 -2167 760 335 32 67 chr5 94146589 94147447 -108938085 + HERVL LTR ERVL 4125 4951 -703 22 0 0 0 chr5 94148345 94148367 -108937165 + AT_rich Low_complexity Low_complexity 1 22 0 274 326 43 0 chr5 94149814 94149906 -108935626 + MER5A DNA MER1_type 9 104 -85 675 315 103 35 chr5 94150626 94151052 -108934480 + LTR33 LTR ERVL 54 508 -13 523 284 30 6 chr5 94151256 94151425 -108934107 - MER97b DNA MER1_type? -875 178 6 474 297 77 26 chr5 94151709 94152127 -108933405 - L1M4 LINE L1 -1701 4445 4007 276 30 0 0 chr5 94152287 94152320 -108933212 + (CA)n Simple_repeat Simple_repeat 2 34 0 432 290 116 54 chr5 94152885 94153292 -108932240 - L1M4 LINE L1 -2880 3266 2835 23 78 0 0 chr5 94153961 94154012 -108931520 + AT_rich Low_complexity Low_complexity 1 51 0 336 94 0 0 chr5 94155517 94155570 -108929962 + (TG)n Simple_repeat Simple_repeat 2 54 0 271 59 0 0 chr5 94155896 94155930 -108929602 - U2 snRNA snRNA -154 34 1 21 0 0 0 chr5 94156461 94156482 -108929050 + AT_rich Low_complexity Low_complexity 1 21 0 1768 163 180 45 chr5 94156488 94156937 -108928595 + LTR54 LTR ERV1 1 510 0 523 311 43 30 chr5 94156953 94157067 -108928465 + LTR23-int LTR ERV1 1917 2028 -4303 2261 224 40 74 chr5 94157067 94157811 -108927721 - MER72 LTR ERV1 0 722 4 523 311 43 30 chr5 94157811 94157931 -108927601 + LTR23-int LTR ERV1 2028 2154 -4177 279 287 11 21 chr5 94158087 94158181 -108927351 + LTR23-int LTR ERV1 2106 2198 -4133 367 284 0 11 chr5 94158566 94158661 -108926871 + LTR23-int LTR ERV1 2449 2542 -3789 942 184 4 78 chr5 94158732 94158976 -108926556 + LTR23-int LTR ERV1 617 842 -6695 490 271 68 1 chr5 94159078 94159244 -108926288 + LTR23-int LTR ERV1 853 2630 -3701 9730 268 40 42 chr5 94159346 94159413 -108926119 - L1PA12 LINE L1 -1908 5676 5610 2046 123 7 27 chr5 94159413 94159714 -108925818 - AluSq SINE Alu -18 295 1 9730 268 40 42 chr5 94159714 94165341 -108920191 - L1PA12 LINE L1 -1974 5610 1 3385 231 82 49 chr5 94165357 94165976 -108919556 + LTR23-int LTR ERV1 2472 3069 -1802 2096 129 0 28 chr5 94165976 94166293 -108919239 - AluSx SINE Alu -4 308 1 1497 208 17 17 chr5 94166294 94166592 -108918940 - AluJo SINE Alu -11 301 4 3385 231 82 49 chr5 94166592 94167724 -108917808 + LTR23-int LTR ERV1 3068 3817 -1054 181 269 92 67 chr5 94167724 94167843 -108917689 - L3 LINE CR1 -211 1366 1245 588 304 12 6 chr5 94167852 94168020 -108917512 + LTR23-int LTR ERV1 3935 4103 -768 1889 270 38 12 chr5 94168217 94168714 -108916818 + LTR23-int LTR ERV1 6635 7144 -393 1226 167 65 4 chr5 94168714 94169021 -108916511 + LTR54 LTR ERV1 1 381 -129 1291 61 5 77 chr5 94169041 94169237 -108916295 + LTR9B LTR ERV1 1 182 -462 3004 137 17 4 chr5 94170294 94170763 -108914769 + LTR9B LTR ERV1 170 644 0 204 345 62 26 chr5 94171274 94171387 -108914145 - L2 LINE L2 -237 3035 2919 1600 266 48 50 chr5 94171731 94172370 -108913162 + L1MCb LINE L1 15 652 -5393 923 196 59 5 chr5 94172371 94172590 -108912942 + LTR8 LTR ERV1 1 231 -460 2368 63 0 32 chr5 94172596 94172911 -108912621 + AluY SINE Alu 1 305 -6 882 319 58 9 chr5 94172920 94173246 -108912286 + LTR8 LTR ERV1 350 691 0 365 293 22 67 chr5 94173246 94173471 -108912061 + L1MCb LINE L1 650 864 -5181 481 307 27 0 chr5 94173476 94173626 -108911906 - LTR52 LTR ERVL -2 419 266 1248 220 42 31 chr5 94173629 94174091 -108911441 - LTR29 LTR ERV1 -2 642 137 260 292 21 21 chr5 94174096 94174192 -108911340 - MER34 LTR ERV1 -446 96 1 784 253 64 8 chr5 94174192 94174441 -108911091 - LTR52 LTR ERVL -153 268 6 2832 238 75 47 chr5 94174470 94175836 -108909696 + L1MCb LINE L1 897 2223 -4522 2173 108 10 0 chr5 94175836 94176132 -108909400 + AluSc SINE Alu 1 299 -10 1315 55 0 16 chr5 94176135 94176318 -108909214 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2832 238 75 47 chr5 94176318 94176480 -108909052 + L1MCb LINE L1 2224 2717 -4028 2171 158 7 32 chr5 94176486 94176891 -108908641 + L1PA13 LINE L1 5758 6152 -11 5217 272 41 23 chr5 94176955 94179286 -108906246 + L1MCb LINE L1 2687 5059 -1505 6800 71 1 0 chr5 94179435 94180577 -108904955 + L1PA7 LINE L1 5013 6151 -3 1001 281 65 70 chr5 94180613 94181417 -108904115 + L1MCc LINE L1 807 1602 -4900 2174 185 78 37 chr5 94181461 94181932 -108903600 + MLT2B1 LTR ERVL 1 493 -27 377 257 74 55 chr5 94182058 94182136 -108903396 - L1M4 LINE L1 -3012 3134 3059 2151 122 3 0 chr5 94182136 94182430 -108903102 - AluSp SINE Alu -18 295 1 377 257 74 55 chr5 94182430 94182608 -108902924 - L1M4 LINE L1 -3087 3059 2873 3689 254 52 55 chr5 94182608 94184041 -108901491 + L1MC4a LINE L1 6379 7807 -1 886 110 0 24 chr5 94184283 94184410 -108901122 - AluSg/x SINE Alu -19 293 170 607 235 150 7 chr5 94184790 94184943 -108900589 + MER5A DNA MER1_type 1 175 -14 2192 115 0 0 chr5 94184999 94185303 -108900229 - AluSc SINE Alu -5 304 1 336 290 30 0 chr5 94185892 94185992 -108899540 + MER63 DNA MER1_type 959 1061 -1 24 0 0 0 chr5 94186753 94186777 -108898755 + AT_rich Low_complexity Low_complexity 1 24 0 418 315 111 21 chr5 94187348 94187735 -108897797 + L1ME4a LINE L1 5446 5867 -254 273 111 0 0 chr5 94187839 94187884 -108897648 + MER57B LTR ERV1 390 434 0 4788 129 22 2 chr5 94187885 94188726 -108896806 + MER57B-int LTR ERV1 2 859 -5087 * 22570 130 52 33 chr5 94188694 94193221 -108892311 + MER57B-int LTR ERV1 1530 7150 -387 682 125 23 31 chr5 94193221 94193349 -108892183 + LTR54B LTR ERV1 5 131 -367 1373 95 116 45 chr5 94193349 94193591 -108891941 + MER57B-int LTR ERV1 7279 7537 0 2529 149 14 0 chr5 94193591 94194015 -108891517 + MER57B LTR ERV1 1 430 -4 1619 239 101 29 chr5 94194023 94194883 -108890649 + L1MDb LINE L1 756 1680 -4702 299 54 0 0 chr5 94194916 94194953 -108890579 - MER57B LTR ERV1 -292 142 106 349 187 57 6 chr5 94194970 94195085 -108890447 + (TA)n Simple_repeat Simple_repeat 1 109 -325 523 80 13 0 chr5 94195085 94195160 -108890372 - MADE1 DNA Mariner -2 78 3 349 187 57 6 chr5 94195160 94195383 -108890149 + (TA)n Simple_repeat Simple_repeat 109 434 0 3643 264 80 32 chr5 94195392 94197161 -108888371 + L1MD2 LINE L1 896 1772 -4610 6607 60 43 0 chr5 94197161 94198214 -108887318 - L1PA7 LINE L1 -3 6151 5089 3643 264 80 32 chr5 94198214 94200815 -108884717 + L1MD2 LINE L1 1772 4246 -2136 2075 211 20 10 chr5 94200817 94201405 -108884127 + L1M2 LINE L1 4850 5441 -743 * 4224 160 27 1 chr5 94201404 94202333 -108883199 - L1PB2 LINE L1 -195 5956 5008 776 194 21 0 chr5 94202333 94202519 -108883013 + L1MA7 LINE L1 6102 6291 0 33 73 0 0 chr5 94202631 94202699 -108882833 + AT_rich Low_complexity Low_complexity 1 68 0 870 263 116 35 chr5 94202714 94203285 -108882247 + L1MD2 LINE L1 4194 4810 -1572 3217 241 33 62 chr5 94203292 94203481 -108882051 + L1MD2 LINE L1 5203 5396 -1199 1989 148 138 5 chr5 94203481 94203859 -108881673 + MSTA LTR MaLR 1 428 0 3217 241 33 62 chr5 94203859 94205018 -108880514 + L1MD2 LINE L1 5396 6505 -90 611 343 85 7 chr5 94205236 94205673 -108879859 - L1MC4a LINE L1 -1893 5915 5445 2210 152 56 2 chr5 94205838 94206232 -108879300 + MSTA LTR MaLR 1 415 -13 28 29 0 0 chr5 94206602 94206637 -108878895 + AT_rich Low_complexity Low_complexity 1 35 0 207 69 0 0 chr5 94207592 94207621 -108877911 + (CA)n Simple_repeat Simple_repeat 2 30 0 255 228 69 30 chr5 94208225 94208326 -108877206 + MER65A LTR ERV1 24 128 -317 681 353 113 12 chr5 94209075 94209475 -108876057 + LTR16B LTR ERVL 13 452 -12 21 36 0 0 chr5 94209684 94209712 -108875820 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 94209797 94209849 -108875683 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 94209943 94209964 -108875568 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 94210020 94210042 -108875490 + AT_rich Low_complexity Low_complexity 1 22 0 409 340 47 14 chr5 94210122 94210337 -108875195 + L1ME LINE L1 197 418 -5652 295 302 19 71 chr5 94210440 94210652 -108874880 + L1ME LINE L1 489 689 -5381 1883 39 0 0 chr5 94210683 94210915 -108874617 + L1PA5 LINE L1 5923 6154 0 578 307 50 38 chr5 94210946 94211476 -108874056 + L1ME LINE L1 873 1579 -4668 1703 249 43 31 chr5 94211799 94212386 -108873146 + L1MD1 LINE L1 5648 6241 -1 361 241 36 0 chr5 94212573 94212685 -108872847 + L1M4 LINE L1 4164 4279 -1867 319 300 31 130 chr5 94212685 94213038 -108872494 - L1ME LINE L1 -524 5638 5321 22 56 0 0 chr5 94213081 94213117 -108872415 + AT_rich Low_complexity Low_complexity 1 36 0 824 158 89 46 chr5 94213459 94213723 -108871809 + MLT1A1 LTR MaLR 2 365 0 12345 193 72 10 chr5 94213784 94218397 -108867135 - L1PBa LINE L1 -1274 5588 694 998 262 90 8 chr5 94218424 94218791 -108866741 - L1PBa LINE L1 -6461 402 6 189 147 0 0 chr5 94219256 94219290 -108866242 + (T)n Simple_repeat Simple_repeat 1 34 0 25 31 0 0 chr5 94219496 94219528 -108866004 + AT_rich Low_complexity Low_complexity 1 32 0 576 233 23 0 chr5 94220042 94220171 -108865361 - MER58B DNA MER1_type -12 329 198 1067 226 77 62 chr5 94220192 94220582 -108864950 + MSTD LTR MaLR 1 396 0 278 358 37 5 chr5 94220897 94221084 -108864448 - HAL1 LINE L1 -846 1661 1469 1318 237 60 44 chr5 94221097 94221594 -108863938 + MLT1D LTR MaLR 1 505 0 22 35 0 0 chr5 94222153 94222182 -108863350 + AT_rich Low_complexity Low_complexity 1 29 0 288 284 176 14 chr5 94223385 94223533 -108861999 - MIR SINE MIR 0 262 91 1340 244 13 21 chr5 94224664 94225037 -108860495 - MLT1A2 LTR MaLR -4 370 1 245 192 13 103 chr5 94225126 94225204 -108860328 + L2 LINE L2 3243 3313 0 746 336 24 4 chr5 94225235 94225485 -108860047 + MIR SINE MIR 5 259 -3 1868 158 0 16 chr5 94225658 94225969 -108859563 - AluSx SINE Alu 0 312 7 33 43 0 0 chr5 94226702 94226749 -108858783 + AT_rich Low_complexity Low_complexity 1 47 0 47 86 0 0 chr5 94227067 94227184 -108858348 + AT_rich Low_complexity Low_complexity 1 117 0 22 70 0 0 chr5 94228713 94228756 -108856776 + AT_rich Low_complexity Low_complexity 1 43 0 1946 152 119 16 chr5 94229074 94229462 -108856070 + MSTA LTR MaLR 1 428 0 3405 163 21 63 chr5 94229466 94230176 -108855356 + MSTA-int LTR MaLR 6 685 -895 25 0 0 0 chr5 94231950 94231975 -108853557 + AT_rich Low_complexity Low_complexity 1 25 0 292 247 52 10 chr5 94232084 94232181 -108853351 - L1ME LINE L1 -435 5729 5629 1090 219 38 82 chr5 94232269 94232635 -108852897 - MLT2D LTR ERVL -64 350 1 230 184 122 0 chr5 94232888 94232937 -108852595 + MLT2D LTR ERVL 298 352 -62 348 24 0 0 chr5 94232952 94232993 -108852539 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 200 0 0 chr5 94233005 94233045 -108852487 + (CA)n Simple_repeat Simple_repeat 2 41 0 273 214 0 0 chr5 94233091 94233147 -108852385 + L1ME LINE L1 5625 5680 -484 10106 33 0 0 chr5 94233247 94235240 -108850292 + L1PA3 LINE L1 4162 6155 0 33 0 0 0 chr5 94235240 94235273 -108850259 + AT_rich Low_complexity Low_complexity 1 33 0 1912 99 0 4 chr5 94235927 94236179 -108849353 + AluSg SINE Alu 4 254 -56 1650 173 0 20 chr5 94236753 94237054 -108848478 + AluJb SINE Alu 1 295 -17 23 33 0 0 chr5 94237286 94237316 -108848216 + AT_rich Low_complexity Low_complexity 1 30 0 285 105 0 0 chr5 94237511 94237549 -108847983 - LTR18B LTR ERVL -317 297 260 * 726 149 8 22 chr5 94237541 94237675 -108847857 - LTR18B LTR ERVL -153 461 330 227 286 0 0 chr5 94237691 94237747 -108847785 + CT-rich Low_complexity Low_complexity 1 56 0 494 345 7 29 chr5 94237748 94238026 -108847506 - HERVI LTR ERV1 -6796 989 718 1651 161 3 28 chr5 94240454 94240745 -108844787 - AluJo SINE Alu -22 290 7 344 280 36 47 chr5 94241914 94242107 -108843425 + MER117 DNA MER1_type 6 196 -1 22 35 0 0 chr5 94243314 94243343 -108842189 + AT_rich Low_complexity Low_complexity 1 29 0 187 385 10 10 chr5 94243508 94243604 -108841928 - MIR3 SINE MIR -50 158 63 300 258 26 13 chr5 94244023 94244174 -108841358 + (TATAA)n Simple_repeat Simple_repeat 2 154 0 333 109 0 0 chr5 94245372 94245418 -108840114 + MSTB LTR MaLR 381 426 0 2333 231 63 30 chr5 94245427 94246121 -108839411 - L1MC4a LINE L1 -1495 6313 5597 382 214 0 24 chr5 94246280 94246364 -108839168 + MER77 LTR ERV1 57 138 -467 1533 275 40 11 chr5 94246535 94247279 -108838253 - L1MEc LINE L1 -3068 3780 2996 309 241 0 0 chr5 94247310 94247389 -108838143 - L1MEc LINE L1 -4580 2449 2371 379 246 54 23 chr5 94248344 94248474 -108837058 + MER20B DNA MER1_type 36 169 -614 675 294 29 15 chr5 94248523 94248795 -108836737 + MARNA DNA Mariner 168 443 -143 2152 126 131 8 chr5 94249728 94250109 -108835423 - MSTA LTR MaLR 0 428 1 370 287 84 18 chr5 94251045 94251212 -108834320 + MIR3 SINE MIR 17 194 -14 32 26 0 0 chr5 94251605 94251644 -108833888 + AT_rich Low_complexity Low_complexity 1 39 0 329 306 147 6 chr5 94254037 94254207 -108831325 - MIR SINE MIR -18 244 51 739 165 0 104 chr5 94254601 94254765 -108830767 - MER58A DNA MER1_type 0 147 1 671 309 51 8 chr5 94254969 94255205 -108830327 - MIR SINE MIR 0 262 17 1384 196 47 36 chr5 94255768 94256069 -108829463 - AluJo SINE Alu -8 304 1 288 254 0 0 chr5 94256851 94256918 -108828614 + (CCG)n Simple_repeat Simple_repeat 1 67 0 494 288 112 101 chr5 94256996 94257453 -108828079 - L1 LINE L1 -5472 1377 927 180 0 0 0 chr5 94257453 94257473 -108828059 + (CAG)n Simple_repeat Simple_repeat 2 21 0 494 288 112 101 chr5 94257473 94258128 -108827404 - L1 LINE L1 -5922 927 387 320 290 119 72 chr5 94258145 94258438 -108827094 + L1M2 LINE L1 663 969 -5880 23 0 0 0 chr5 94258751 94258774 -108826758 + AT_rich Low_complexity Low_complexity 1 23 0 5483 55 1 35 chr5 94260686 94261431 -108824101 + L1P LINE L1 4 723 -5423 10524 115 8 7 chr5 94261742 94263377 -108822155 + L1P LINE L1 3139 4775 -1371 10396 37 1 26 chr5 94263479 94264879 -108820653 - L1P LINE L1 -2362 3784 2419 397 103 0 0 chr5 94264987 94265045 -108820487 - MER51A LTR ERV1 -576 58 1 49 60 0 0 chr5 94265062 94265146 -108820386 + AT_rich Low_complexity Low_complexity 1 84 0 235 138 95 43 chr5 94265187 94265303 -108820229 + (ATATG)n Simple_repeat Simple_repeat 5 126 0 233 125 18 0 chr5 94265401 94265457 -108820075 + (TA)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr5 94265606 94265627 -108819905 + (CA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr5 94266627 94266650 -108818882 + AT_rich Low_complexity Low_complexity 1 23 0 182 218 0 18 chr5 94267087 94267142 -108818390 + (TA)n Simple_repeat Simple_repeat 1 54 0 1249 137 0 0 chr5 94267142 94267325 -108818207 + THE1B LTR MaLR 2 184 -180 995 224 67 33 chr5 94269166 94269496 -108816036 - MER58B DNA MER1_type 0 341 1 1654 100 4 0 chr5 94269733 94269962 -108815570 - MER51B LTR ERV1 0 377 148 4006 128 10 0 chr5 94270062 94270639 -108814893 + THE1B-int LTR MaLR 998 1580 0 2127 156 5 35 chr5 94270641 94271014 -108814518 + THE1B LTR MaLR 3 364 0 320 336 0 26 chr5 94271559 94271675 -108813857 + MIR3 SINE MIR 96 208 0 387 0 0 0 chr5 94272128 94272171 -108813361 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 270 139 47 0 chr5 94272171 94272214 -108813318 - MER41-int LTR ERV1 -1578 4368 4324 273 0 0 0 chr5 94272214 94272255 -108813277 - L1PA2 LINE L1 0 6155 6115 30429 39 1 3 chr5 94272360 94276209 -108809323 + L1P LINE L1 700 4668 -1478 8069 110 16 16 chr5 94276312 94278290 -108807242 + L1PA7 LINE L1 4174 6149 -5 246 361 150 0 chr5 94278427 94278560 -108806972 - MIR SINE MIR -78 184 32 1620 185 54 20 chr5 94279789 94280140 -108805392 + MLT1B LTR MaLR 28 390 0 23 0 0 0 chr5 94280668 94280691 -108804841 + AT_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 94281849 94281892 -108803640 + (GA)n Simple_repeat Simple_repeat 2 44 0 329 347 26 14 chr5 94282677 94283068 -108802464 + HERV16 LTR ERVL 2657 3081 -2404 21 36 0 0 chr5 94283121 94283149 -108802383 + AT_rich Low_complexity Low_complexity 1 28 0 620 298 14 82 chr5 94283469 94283676 -108801856 - LTR16C LTR ERVL -93 398 223 1213 251 114 11 chr5 94283676 94284035 -108801497 - MSTD LTR MaLR 0 396 1 620 298 14 82 chr5 94284035 94284179 -108801353 - LTR16C LTR ERVL -268 223 71 340 261 35 0 chr5 94286543 94286685 -108798847 + (TA)n Simple_repeat Simple_repeat 1 147 0 22 35 0 0 chr5 94288056 94288085 -108797447 + AT_rich Low_complexity Low_complexity 1 29 0 503 325 48 44 chr5 94288710 94289005 -108796527 + HERV16 LTR ERVL 3964 4259 -1505 2263 267 42 24 chr5 94289025 94289972 -108795560 + L1MB8 LINE L1 3089 4052 -2094 799 200 176 4 chr5 94289971 94290415 -108795117 + L1MB8 LINE L1 5077 5590 -572 * 981 251 40 42 chr5 94290420 94290503 -108795029 + L1MB8 LINE L1 5789 5871 -307 1374 226 22 103 chr5 94290503 94291048 -108794484 - MLT1D LTR MaLR -2 503 3 981 251 40 42 chr5 94291048 94291318 -108794214 + L1MB8 LINE L1 5871 6141 -37 180 111 0 0 chr5 94291465 94291492 -108794040 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 241 65 65 16 chr5 94291732 94291794 -108793738 + (TA)n Simple_repeat Simple_repeat 2 66 0 270 303 239 0 chr5 94291798 94291953 -108793579 + MIR SINE MIR 65 256 -6 239 238 16 16 chr5 94293397 94293460 -108792072 + MER91B DNA MER1_type 1 63 -127 231 204 0 0 chr5 94293496 94293545 -108791987 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 232 222 22 22 chr5 94293545 94293635 -108791897 - L1MC4 LINE L1 -1339 6703 6614 279 79 0 0 chr5 94293635 94293673 -108791859 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 330 280 128 16 chr5 94293673 94293798 -108791734 - MER58C DNA MER1_type -49 166 28 231 309 8 89 chr5 94293913 94294036 -108791496 - L2 LINE L2 -2 3311 3199 1744 153 43 10 chr5 94294123 94294423 -108791109 + AluJo SINE Alu 3 312 0 295 323 27 79 chr5 94294503 94294872 -108790660 - L2 LINE L2 -984 2330 1981 2275 146 41 21 chr5 94295232 94295651 -108789881 - MSTA LTR MaLR -1 427 1 22 0 0 0 chr5 94296251 94296273 -108789259 + AT_rich Low_complexity Low_complexity 1 22 0 2197 95 0 11 chr5 94296282 94296598 -108788934 + AluSc SINE Alu 1 313 0 22 0 0 0 chr5 94297479 94297501 -108788031 + AT_rich Low_complexity Low_complexity 1 22 0 30 69 0 0 chr5 94297837 94297895 -108787637 + AT_rich Low_complexity Low_complexity 1 58 0 28270 132 12 14 chr5 94298173 94303938 -108781594 - L1PA8A LINE L1 -3 6443 843 429 232 36 0 chr5 94304165 94304277 -108781255 - L1ME LINE L1 -415 5818 5703 530 259 35 26 chr5 94304327 94304559 -108780973 - L1ME LINE L1 -670 5563 5330 * 977 118 0 0 chr5 94304556 94304691 -108780841 - L1P3 LINE L1 -6317 144 10 348 276 98 31 chr5 94304708 94304871 -108780661 - L1ME LINE L1 -4023 2373 2200 315 281 129 0 chr5 94304896 94305035 -108780497 - L1ME LINE L1 -4257 2139 1983 21 0 0 0 chr5 94305701 94305722 -108779810 + AT_rich Low_complexity Low_complexity 1 21 0 4341 248 34 33 chr5 94305758 94307081 -108778451 - L1MC3 LINE L1 -583 7202 5879 21 0 0 0 chr5 94307087 94307108 -108778424 + AT_rich Low_complexity Low_complexity 1 21 0 1325 200 33 11 chr5 94307108 94307383 -108778149 - AluJb SINE Alu -25 287 7 1641 219 18 3 chr5 94307389 94307772 -108777760 - L1MC3 LINE L1 -456 5888 5500 816 200 13 0 chr5 94307926 94308081 -108777451 + L1MC/D LINE L1 5493 5649 -2136 234 193 0 0 chr5 94308181 94308238 -108777294 + (TA)n Simple_repeat Simple_repeat 1 57 0 324 167 56 37 chr5 94308535 94308697 -108776835 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 229 195 60 27 chr5 94308628 94308777 -108776755 + (TTATA)n Simple_repeat Simple_repeat 1 154 0 * 203 188 21 0 chr5 94309034 94309082 -108776450 + (TG)n Simple_repeat Simple_repeat 2 50 0 263 203 14 0 chr5 94309106 94309175 -108776357 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 213 94 0 0 chr5 94309647 94309679 -108775853 + (TG)n Simple_repeat Simple_repeat 2 33 0 215 197 91 0 chr5 94309913 94309979 -108775553 - MIR SINE MIR -99 163 92 43 35 0 0 chr5 94311157 94311214 -108774318 + AT_rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr5 94311482 94311510 -108774022 + AT_rich Low_complexity Low_complexity 1 28 0 338 249 66 88 chr5 94313547 94313912 -108771620 + L1MC5 LINE L1 7505 7861 -100 227 241 52 0 chr5 94313958 94314016 -108771516 - MIR SINE MIR -30 232 172 1089 209 25 17 chr5 94314016 94314251 -108771281 + AluJo SINE Alu 1 237 -75 24 0 0 0 chr5 94314262 94314286 -108771246 + AT_rich Low_complexity Low_complexity 1 24 0 412 173 62 0 chr5 94314286 94314367 -108771165 - MIR SINE MIR -76 186 101 22 0 0 0 chr5 94315725 94315747 -108769785 + AT_rich Low_complexity Low_complexity 1 22 0 2003 178 22 0 chr5 94315858 94316229 -108769303 + L1PA16 LINE L1 5788 6166 0 24 32 0 0 chr5 94316239 94316270 -108769262 + AT_rich Low_complexity Low_complexity 1 31 0 1776 271 67 50 chr5 94317872 94318578 -108766954 - L1ME3A LINE L1 -9 6161 5436 1174 150 12 43 chr5 94318578 94318621 -108766911 - L1MA9 LINE L1 -6 6306 6263 1690 74 0 5 chr5 94318621 94318837 -108766695 + AluSc SINE Alu 84 298 -11 1174 150 12 43 chr5 94318837 94319046 -108766486 - L1MA9 LINE L1 -49 6263 6062 1776 271 67 50 chr5 94319046 94319206 -108766326 - L1ME3A LINE L1 -734 5436 5280 22 35 0 0 chr5 94319730 94319759 -108765773 + AT_rich Low_complexity Low_complexity 1 29 0 253 291 138 31 chr5 94321684 94321945 -108763587 + Tigger8 DNA MER2_type 223 511 -155 2476 293 75 42 chr5 94323525 94323981 -108761551 + L1M1 LINE L1 65 504 -7061 550 112 0 0 chr5 94323981 94324070 -108761462 - L1PB1 LINE L1 0 6151 6063 2476 293 75 42 chr5 94324070 94325267 -108760265 + L1M1 LINE L1 504 2432 -5133 1534 235 52 18 chr5 94326527 94327030 -108758502 + L1M1 LINE L1 2417 2936 -4629 7044 177 59 24 chr5 94327042 94328481 -108757051 + L1MA4 LINE L1 3 1390 -5225 1729 179 127 16 chr5 94328481 94328866 -108756666 - MSTA LTR MaLR 0 428 1 8590 160 16 35 chr5 94328867 94330474 -108755058 - MSTA-int LTR MaLR -1 1579 3 1660 177 145 16 chr5 94330476 94330855 -108754677 - MSTA LTR MaLR 0 428 1 7044 177 59 24 chr5 94330855 94331607 -108753925 + L1MA4 LINE L1 1390 2114 -4501 188 86 29 0 chr5 94331607 94331642 -108753890 + (TA)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr5 94331641 94331661 -108753871 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 7044 177 59 24 chr5 94331642 94332648 -108752884 + L1MA4 LINE L1 2114 6492 -123 * 19282 166 6 12 chr5 94332646 94332819 -108752713 + L1P3 LINE L1 1039 1212 -5249 216 67 0 0 chr5 94332819 94332849 -108752683 + (CAA)n Simple_repeat Simple_repeat 1 30 0 19282 166 6 12 chr5 94332849 94336327 -108749205 + L1P3 LINE L1 1212 4729 -1732 4811 110 0 18 chr5 94336429 94337136 -108748396 - L1P3 LINE L1 -5760 701 8 342 254 62 98 chr5 94337207 94337483 -108748049 - MLT1J LTR MaLR -17 494 229 449 130 0 19 chr5 94338392 94338500 -108747032 + (GAA)n Simple_repeat Simple_repeat 3 108 0 304 282 0 0 chr5 94338502 94338580 -108746952 - MIR SINE MIR 0 262 185 1520 121 28 0 chr5 94338580 94338829 -108746703 - L1PA13 LINE L1 -2 6161 5906 270 175 0 0 chr5 94338829 94338869 -108746663 - L1PA13 LINE L1 -6747 40 1 716 191 159 26 chr5 94339355 94339544 -108745988 - MER20 DNA MER1_type -4 215 2 704 161 0 0 chr5 94339711 94339823 -108745709 - MSTA LTR MaLR 0 355 244 4943 104 1 78 chr5 94339830 94340648 -108744884 - THE1A-int LTR MaLR -825 755 1 2495 99 3 22 chr5 94340648 94341010 -108744522 - THE1A LTR MaLR 0 355 1 348 83 0 0 chr5 94341965 94342013 -108743519 + (T)n Simple_repeat Simple_repeat 1 48 0 1035 234 35 36 chr5 94342221 94342520 -108743012 + MLT2B2 LTR ERVL 137 480 -40 4590 102 23 41 chr5 94342581 94343287 -108742245 + HSMAR1 DNA Mariner 594 1286 -1 600 288 55 31 chr5 94344234 94344526 -108741006 - Charlie2b DNA MER1_type -2125 657 359 411 318 102 19 chr5 94344668 94345004 -108740528 + L1MC4a LINE L1 5491 5849 -302 621 293 84 21 chr5 94345057 94345084 -108740448 - MIR SINE MIR -2 260 236 1999 142 43 68 chr5 94345084 94345527 -108740005 + MSTB1 LTR MaLR 1 432 0 621 293 84 21 chr5 94345527 94345738 -108739794 - MIR SINE MIR -26 236 7 28 48 0 0 chr5 94345889 94345931 -108739601 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr5 94346538 94346573 -108738959 + AT_rich Low_complexity Low_complexity 1 35 0 537 159 73 20 chr5 94346691 94346842 -108738690 - MER53 DNA DNA -7 182 24 31 0 0 0 chr5 94346850 94346881 -108738651 + AT_rich Low_complexity Low_complexity 1 31 0 286 246 31 15 chr5 94346956 94347086 -108738446 + (TA)n Simple_repeat Simple_repeat 2 133 0 28 79 0 0 chr5 94347376 94347439 -108738093 + AT_rich Low_complexity Low_complexity 1 63 0 29 0 0 0 chr5 94347671 94347700 -108737832 + AT_rich Low_complexity Low_complexity 1 29 0 3481 31 5 0 chr5 94348203 94348621 -108736911 + L1PA5 LINE L1 5723 6142 -12 292 196 0 22 chr5 94348624 94348716 -108736816 - L1MC4 LINE L1 -1339 6703 6614 4815 190 71 9 chr5 94348841 94349978 -108735554 + L1MC1 LINE L1 5121 6320 -13 677 124 0 8 chr5 94350097 94350218 -108735314 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 21 36 0 0 chr5 94350663 94350691 -108734841 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 94351422 94351451 -108734081 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 94351818 94351860 -108733672 + AT_rich Low_complexity Low_complexity 1 42 0 16575 166 21 17 chr5 94352573 94356819 -108728713 + L1M1 LINE L1 12 4286 -3279 267 205 12 48 chr5 94356904 94356987 -108728545 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 31 26 0 0 chr5 94357565 94357603 -108727929 + AT_rich Low_complexity Low_complexity 1 38 0 206 81 27 0 chr5 94358221 94358258 -108727274 + (CA)n Simple_repeat Simple_repeat 1 38 0 499 225 38 4 chr5 94358506 94358646 -108726886 + L1MA10 LINE L1 6174 6325 0 438 276 83 70 chr5 94358795 94359096 -108726436 - L2 LINE L2 -764 2550 2246 31 92 0 0 chr5 94359376 94359463 -108726069 + AT_rich Low_complexity Low_complexity 1 87 0 456 272 0 32 chr5 94359828 94359953 -108725579 - L2 LINE L2 0 3313 3193 365 278 51 51 chr5 94360118 94360294 -108725238 + L1MC4 LINE L1 7712 7887 -155 206 229 0 21 chr5 94360500 94360548 -108724984 + GA-rich Low_complexity Low_complexity 2 48 0 455 282 123 73 chr5 94361718 94361938 -108723594 + MIR SINE MIR 11 241 -21 198 0 0 0 chr5 94363850 94363872 -108721660 + (CATATA)n Simple_repeat Simple_repeat 2 23 0 1561 178 37 55 chr5 94363883 94364265 -108721267 - THE1C LTR MaLR 0 375 1 8726 147 62 10 chr5 94364265 94365767 -108719765 - THE1C-int LTR MaLR 0 1580 1 1558 170 75 92 chr5 94365769 94366167 -108719365 - THE1C LTR MaLR -2 373 3 407 151 0 27 chr5 94366175 94366248 -108719284 - THE1C LTR MaLR -301 74 4 21 57 0 0 chr5 94366642 94366677 -108718855 + AT_rich Low_complexity Low_complexity 1 35 0 474 294 56 33 chr5 94367287 94367467 -108718065 + MIR SINE MIR 1 184 -78 2182 126 132 5 chr5 94368197 94368577 -108716955 - MSTA LTR MaLR 0 428 1 2628 204 50 2 chr5 94370118 94370677 -108714855 - L1MC2 LINE L1 -3 6341 5756 1510 260 99 23 chr5 94370675 94371170 -108714362 - L1MCa LINE L1 -3040 3386 2809 * 2036 148 80 3 chr5 94371170 94371535 -108713997 + L1PA15 LINE L1 5773 6165 0 1510 260 99 23 chr5 94371535 94371813 -108713719 - L1MCa LINE L1 -3617 2809 2554 670 262 81 16 chr5 94371847 94372340 -108713192 - L1MCa LINE L1 -4002 2605 2043 260 202 36 0 chr5 94372390 94372729 -108712803 + (TA)n Simple_repeat Simple_repeat 1 351 0 28 0 0 0 chr5 94372730 94372758 -108712774 + AT_rich Low_complexity Low_complexity 1 28 0 412 346 45 21 chr5 94373414 94373657 -108711875 - MIR SINE MIR 0 262 14 25 65 0 0 chr5 94373916 94373962 -108711570 + AT_rich Low_complexity Low_complexity 1 46 0 26 30 0 0 chr5 94374065 94374098 -108711434 + AT_rich Low_complexity Low_complexity 1 33 0 628 295 121 58 chr5 94374757 94375120 -108710412 + LTR16B LTR ERVL 1 386 -78 859 238 62 21 chr5 94375178 94375243 -108710289 - L1MC2 LINE L1 -421 5745 5684 321 100 0 0 chr5 94375243 94375293 -108710239 + (TG)n Simple_repeat Simple_repeat 1 50 0 859 238 62 21 chr5 94375293 94375467 -108710065 - L1MC2 LINE L1 -482 5684 5496 374 35 35 47 chr5 94375471 94375556 -108709976 + (TA)n Simple_repeat Simple_repeat 1 84 0 280 182 84 0 chr5 94375590 94375733 -108709799 + (TA)n Simple_repeat Simple_repeat 2 156 0 21 0 0 0 chr5 94375778 94375799 -108709733 + AT_rich Low_complexity Low_complexity 1 21 0 440 295 47 16 chr5 94375897 94376087 -108709445 - L1ME1 LINE L1 -5 6161 5966 1036 275 51 13 chr5 94376097 94376410 -108709122 - LTR53 LTR ERVL 0 519 195 1311 229 86 63 chr5 94376597 94376829 -108708703 - L1ME1 LINE L1 -273 5893 5668 186 43 0 0 chr5 94376829 94376852 -108708680 + (TG)n Simple_repeat Simple_repeat 1 23 0 1311 229 86 63 chr5 94376852 94376919 -108708613 - L1ME1 LINE L1 -498 5668 5604 891 74 0 16 chr5 94376919 94377041 -108708491 - L1PA8 LINE L1 -6 6166 6047 1311 229 86 63 chr5 94377041 94377217 -108708315 - L1ME1 LINE L1 -562 5604 5406 21 36 0 0 chr5 94377225 94377253 -108708279 + AT_rich Low_complexity Low_complexity 1 28 0 255 170 0 0 chr5 94377591 94377638 -108707894 + HAL1b LINE L1 746 792 -556 216 328 49 25 chr5 94377909 94378031 -108707501 - MIR SINE MIR -6 256 132 517 279 64 41 chr5 94378525 94378570 -108706962 + MER58A DNA MER1_type 1 43 -2377 198 71 0 0 chr5 94378570 94378598 -108706934 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 517 279 64 41 chr5 94378598 94378771 -108706761 + MER58A DNA MER1_type 43 224 0 213 39 0 0 chr5 94379288 94379314 -108706218 + (CAA)n Simple_repeat Simple_repeat 2 27 0 452 280 92 23 chr5 94381202 94381420 -108704112 - LTR50 LTR ERVL -55 740 508 1004 254 81 104 chr5 94381841 94382495 -108703037 - L1MC4 LINE L1 -139 7903 7265 336 78 250 0 chr5 94382495 94382559 -108702973 + MADE1 DNA Mariner 1 80 0 683 239 84 31 chr5 94382583 94382665 -108702867 - L1MC4 LINE L1 -954 7088 7012 1934 192 33 33 chr5 94382665 94383093 -108702439 - MSTC LTR MaLR 0 428 1 683 239 84 31 chr5 94383093 94383236 -108702296 - L1MC4 LINE L1 -1030 7012 6851 302 346 0 16 chr5 94383548 94383675 -108701857 + L1M4 LINE L1 3623 3747 -2399 324 276 143 62 chr5 94383751 94384477 -108701055 + L1M4 LINE L1 3784 4568 -1578 310 333 43 5 chr5 94384573 94384759 -108700773 + L1M4 LINE L1 4759 4951 -1195 182 206 16 0 chr5 94384851 94384914 -108700618 + (TA)n Simple_repeat Simple_repeat 2 65 0 698 262 0 0 chr5 94384960 94385151 -108700381 - L1MA5 LINE L1 -172 6128 5938 180 176 0 0 chr5 94385201 94385235 -108700297 + (TA)n Simple_repeat Simple_repeat 1 34 0 26 74 0 0 chr5 94385242 94385296 -108700236 + AT_rich Low_complexity Low_complexity 1 54 0 1568 185 17 14 chr5 94385762 94386118 -108699414 + L1MA5 LINE L1 5938 6294 -6 21 0 0 0 chr5 94386118 94386139 -108699393 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 94386416 94386439 -108699093 + AT_rich Low_complexity Low_complexity 1 23 0 30270 50 35 11 chr5 94386536 94390545 -108694987 + L1P LINE L1 3 4107 -2039 25 51 0 0 chr5 94391389 94391428 -108694104 + AT_rich Low_complexity Low_complexity 1 39 0 14079 152 55 24 chr5 94392034 94394669 -108690863 + Tigger2 DNA MER2_type 1 2718 0 2702 22 0 6 chr5 94395905 94396218 -108689314 - AluY SINE Alu 0 311 1 210 150 0 0 chr5 94396385 94396425 -108689107 + (TC)n Simple_repeat Simple_repeat 2 41 0 220 26 26 26 chr5 94398283 94398321 -108687211 + (TTTTTA)n Simple_repeat Simple_repeat 4 41 0 290 164 19 44 chr5 94399742 94399901 -108685631 + (TA)n Simple_repeat Simple_repeat 2 156 0 269 115 57 25 chr5 94399936 94400058 -108685474 + (TA)n Simple_repeat Simple_repeat 2 127 0 230 164 45 18 chr5 94400129 94400239 -108685293 + (TA)n Simple_repeat Simple_repeat 1 113 0 358 127 33 44 chr5 94400256 94400437 -108685095 + (TA)n Simple_repeat Simple_repeat 2 180 0 321 200 0 0 chr5 94400507 94400572 -108684960 - MER74A LTR ERVL -197 361 297 748 240 222 13 chr5 94400630 94400855 -108684677 + AluJo SINE Alu 3 274 -38 2081 106 29 66 chr5 94400886 94401264 -108684268 - THE1B LTR MaLR 0 364 1 263 335 158 29 chr5 94402330 94402410 -108683122 + L2 LINE L2 2808 2876 -437 2165 59 4 0 chr5 94402410 94402682 -108682850 - AluY SINE Alu 0 311 39 263 335 158 29 chr5 94402682 94403019 -108682513 + L2 LINE L2 2876 3279 -34 238 206 14 41 chr5 94404446 94404519 -108681013 + L1ME2 LINE L1 3876 3946 -2200 279 140 0 0 chr5 94404521 94404571 -108680961 + (CTG)n Simple_repeat Simple_repeat 2 51 0 617 276 115 18 chr5 94404617 94405069 -108680463 + L1ME2 LINE L1 3965 4460 -1686 4354 177 44 7 chr5 94405075 94406001 -108679531 + L1PB4 LINE L1 5195 6154 -2 1919 282 62 40 chr5 94406021 94406136 -108679396 + L1ME2 LINE L1 4466 4577 -1587 1752 130 21 7 chr5 94406136 94406421 -108679111 - AluSx SINE Alu -23 289 1 1919 282 62 40 chr5 94406421 94407022 -108678510 + L1ME2 LINE L1 4577 5163 -1001 731 196 0 15 chr5 94407022 94407155 -108678377 - FLAM_C SINE Alu 0 133 3 1919 282 62 40 chr5 94407155 94407320 -108678212 + L1ME2 LINE L1 5163 5323 -841 1968 192 69 15 chr5 94407320 94407726 -108677806 + MSTA LTR MaLR 1 428 0 1919 282 62 40 chr5 94407726 94408495 -108677037 + L1ME2 LINE L1 5323 6154 -10 1581 179 82 17 chr5 94408680 94409032 -108676500 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 94409127 94409148 -108676384 + AT_rich Low_complexity Low_complexity 1 21 0 1724 117 39 3 chr5 94409388 94409671 -108675861 - L1MA1 LINE L1 0 6302 6010 23 68 0 0 chr5 94410181 94410225 -108675307 + AT_rich Low_complexity Low_complexity 1 44 0 290 287 107 33 chr5 94411107 94411257 -108674275 + MLT1K LTR MaLR 228 388 -200 624 225 31 6 chr5 94412293 94412453 -108673079 - L1MB7 LINE L1 -19 6663 6500 * 3202 254 65 92 chr5 94412447 94414787 -108670745 - L1MB7 LINE L1 -702 5980 3524 2728 258 97 15 chr5 94414793 94415677 -108669855 - L1MB7 LINE L1 -5585 957 1 264 308 45 15 chr5 94417190 94417323 -108668209 - MIR SINE MIR -27 235 99 228 290 94 7 chr5 94417827 94417965 -108667567 - L1MC/D LINE L1 -1893 5915 5766 228 154 0 0 chr5 94418044 94418083 -108667449 - L1MC/D LINE L1 -395 5769 5731 2000 142 0 19 chr5 94418163 94418481 -108667051 - AluSx SINE Alu 0 312 1 1596 196 21 0 chr5 94418529 94418809 -108666723 + AluSx SINE Alu 1 286 -26 578 302 74 5 chr5 94419115 94419330 -108666202 - MIR SINE MIR -24 238 9 1779 242 69 22 chr5 94419498 94420047 -108665485 + MER90 LTR ERV1 1 575 0 1010 154 12 0 chr5 94420159 94420328 -108665204 - L1PA16 LINE L1 -166 6000 5830 603 136 48 0 chr5 94420317 94420427 -108665105 + L1ME LINE L1 5722 5842 -279 * 1502 177 46 40 chr5 94420710 94421083 -108664449 - THE1C LTR MaLR 0 375 1 4577 141 23 12 chr5 94421083 94421836 -108663696 - THE1C-int LTR MaLR 0 1580 820 2751 253 5 0 chr5 94421903 94422576 -108662956 - L1P LINE L1 -2979 3167 2492 9467 189 27 8 chr5 94422597 94423109 -108662423 + L1PA13 LINE L1 3184 3685 -2478 1459 197 63 41 chr5 94423109 94423474 -108662058 + THE1C LTR MaLR 1 373 -2 9467 189 27 8 chr5 94423474 94425874 -108659658 + L1PA13 LINE L1 3685 6156 -7 26 82 0 0 chr5 94426040 94426101 -108659431 + AT_rich Low_complexity Low_complexity 1 61 0 27 0 0 0 chr5 94426484 94426511 -108659021 + AT_rich Low_complexity Low_complexity 1 27 0 1846 141 0 10 chr5 94426511 94426801 -108658731 - AluSq SINE Alu -26 287 1 290 293 73 47 chr5 94427258 94427449 -108658083 - L1ME3 LINE L1 -7 6155 5960 297 148 37 0 chr5 94427458 94427539 -108657993 + (TA)n Simple_repeat Simple_repeat 2 85 0 315 206 41 0 chr5 94427648 94427721 -108657811 - L1ME3 LINE L1 -197 5967 5892 341 204 113 63 chr5 94427981 94428123 -108657409 - MER104 DNA Tc2 -4 176 28 261 0 0 0 chr5 94428484 94428513 -108657019 + (CA)n Simple_repeat Simple_repeat 2 30 0 358 196 20 39 chr5 94429348 94429450 -108656082 - L1MC4 LINE L1 -3 8039 7940 333 0 0 0 chr5 94429450 94429487 -108656045 + (TG)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr5 94430862 94430887 -108654645 + AT_rich Low_complexity Low_complexity 1 25 0 281 311 59 59 chr5 94430894 94431116 -108654416 + L3 LINE CR1 626 847 -730 180 111 0 0 chr5 94431183 94431210 -108654322 + (TA)n Simple_repeat Simple_repeat 1 27 0 210 361 70 6 chr5 94431466 94431624 -108653908 + L3 LINE CR1 1156 1323 -254 237 351 18 60 chr5 94432224 94432392 -108653140 + MER5A DNA MER1_type 29 189 0 1230 208 105 6 chr5 94432743 94433056 -108652476 - MER2 DNA MER2_type 0 344 1 446 297 19 32 chr5 94433107 94433262 -108652270 - MER58A DNA MER1_type 0 153 1 485 234 55 0 chr5 94433987 94434115 -108651417 + MLT1D LTR MaLR 369 503 -2 515 278 157 67 chr5 94434160 94435177 -108650355 + L1M4 LINE L1 2166 3274 -2872 21 36 0 0 chr5 94435705 94435733 -108649799 + AT_rich Low_complexity Low_complexity 1 28 0 685 228 71 0 chr5 94435968 94436165 -108649367 - L1MEc LINE L1 -5602 1119 909 469 266 131 30 chr5 94436224 94436363 -108649169 - L1M4 LINE L1 -714 5470 5346 1989 131 0 19 chr5 94436363 94436675 -108648857 - AluSx SINE Alu -6 306 1 469 266 131 30 chr5 94436675 94436929 -108648603 - L1M4 LINE L1 -838 5346 5039 2134 116 0 10 chr5 94436946 94437256 -108648276 - AluSx SINE Alu -1 311 5 24 67 0 0 chr5 94437875 94437920 -108647612 + AT_rich Low_complexity Low_complexity 1 45 0 270 341 44 15 chr5 94439152 94439287 -108646245 - MIR SINE MIR -123 139 1 359 241 175 22 chr5 94440816 94440953 -108644579 + MIR SINE MIR 102 259 -3 283 208 78 0 chr5 94443065 94443142 -108642390 - L1MD3 LINE L1 -11 7984 7902 231 254 114 127 chr5 94443784 94444004 -108641528 - L1MEc LINE L1 -6211 329 113 27 0 0 0 chr5 94444010 94444037 -108641495 + AT_rich Low_complexity Low_complexity 1 27 0 1533 183 6 26 chr5 94444563 94444874 -108640658 + AluJb SINE Alu 1 305 -7 826 339 58 78 chr5 94445083 94445909 -108639623 - L2 LINE L2 -1703 1611 802 342 230 159 0 chr5 94445911 94446024 -108639508 + MER3 DNA MER1_type 3 133 -76 1988 252 59 41 chr5 94446047 94446880 -108638652 - L1ME1 LINE L1 -5 6161 5314 333 259 88 24 chr5 94446850 94447055 -108638477 - L1ME1 LINE L1 -1073 5073 4856 * 29035 116 13 28 chr5 94447309 94453601 -108631931 + L1PA7 LINE L1 183 6469 0 1820 161 79 8 chr5 94453571 94453951 -108631581 + L1P4 LINE L1 5590 5996 -485 * 572 211 39 64 chr5 94453956 94454112 -108631420 - MER2 DNA MER2_type -192 153 2 707 233 28 0 chr5 94454113 94454289 -108631243 + L1MA9 LINE L1 6095 6275 -37 247 284 37 0 chr5 94455180 94455261 -108630271 + GA-rich Low_complexity Low_complexity 5 88 0 12175 67 10 0 chr5 94455340 94457621 -108627911 - L1P2 LINE L1 -670 5484 3186 454 369 47 0 chr5 94457745 94458000 -108627532 - L1M4b LINE L1 -6516 343 77 15625 145 25 30 chr5 94458010 94460780 -108624752 + L1P LINE L1 11 2766 -3380 198 0 0 0 chr5 94460803 94460825 -108624707 + (TAA)n Simple_repeat Simple_repeat 2 23 0 262 278 34 91 chr5 94460839 94460901 -108624631 + MIR SINE MIR 41 105 -157 1741 177 3 0 chr5 94460901 94461210 -108624322 + AluSx SINE Alu 1 310 0 262 278 34 91 chr5 94461210 94461322 -108624210 + MIR SINE MIR 105 206 -56 275 241 13 25 chr5 94461370 94461449 -108624083 - L1M4b LINE L1 -6771 88 11 44 56 0 0 chr5 94461729 94461801 -108623731 + AT_rich Low_complexity Low_complexity 1 72 0 338 374 23 38 chr5 94461997 94462262 -108623270 + MIR SINE MIR 2 262 0 876 109 129 14 chr5 94463049 94463196 -108622336 - THE1C LTR MaLR -211 164 1 13570 192 22 12 chr5 94463196 94465235 -108620297 - L1MA2 LINE L1 -38 7685 5668 1409 217 58 28 chr5 94465235 94465599 -108619933 - THE1C LTR MaLR 0 375 1 9246 143 12 36 chr5 94465599 94467216 -108618316 - THE1C-int LTR MaLR 0 1580 3 1541 171 76 57 chr5 94467218 94467586 -108617946 - THE1C LTR MaLR 0 375 1 13570 192 22 12 chr5 94467586 94468290 -108617242 - L1MA2 LINE L1 -2055 5668 4973 360 0 0 0 chr5 94468290 94468330 -108617202 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 13570 192 22 12 chr5 94468330 94469842 -108615690 - L1MA2 LINE L1 -2750 4973 3386 261 224 0 30 chr5 94469849 94469916 -108615616 + L1M1 LINE L1 1287 1351 -6214 1395 167 8 0 chr5 94469957 94470202 -108615330 + L1M1 LINE L1 1960 2206 -5359 * 5911 218 18 14 chr5 94470199 94471458 -108614074 - L1MA2 LINE L1 -6284 1281 17 25 31 0 0 chr5 94471883 94471915 -108613617 + AT_rich Low_complexity Low_complexity 1 32 0 683 224 134 0 chr5 94472172 94472373 -108613159 + MER5C DNA MER1_type 57 284 -40 240 273 123 26 chr5 94472861 94473015 -108612517 - L1M4 LINE L1 -1347 4799 4631 24 0 0 0 chr5 94473261 94473285 -108612247 + AT_rich Low_complexity Low_complexity 1 24 0 828 222 23 0 chr5 94476528 94476699 -108608833 - MER58A DNA MER1_type -8 216 42 2196 78 0 0 chr5 94476825 94477126 -108608406 - AluY SINE Alu 0 301 1 285 333 0 0 chr5 94477201 94477294 -108608238 - MLT1-int LTR MaLR -843 528 436 872 342 63 40 chr5 94477612 94478135 -108607397 - MLT1H1 LTR MaLR -7 548 14 32 26 0 0 chr5 94478279 94478318 -108607214 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 94478973 94478994 -108606538 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 94479161 94479189 -108606343 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 94480566 94480588 -108604944 + AT_rich Low_complexity Low_complexity 1 22 0 501 115 0 13 chr5 94480763 94480841 -108604691 - MADE1 DNA Mariner 0 80 4 42 48 0 0 chr5 94480980 94481043 -108604489 + AT_rich Low_complexity Low_complexity 1 63 0 294 29 0 0 chr5 94482136 94482171 -108603361 + (TG)n Simple_repeat Simple_repeat 2 36 0 907 280 60 16 chr5 94482719 94483083 -108602449 - L1ME2 LINE L1 -53 6111 5732 268 316 74 37 chr5 94483087 94483277 -108602255 - Charlie2 DNA MER1_type -2584 278 82 25 0 0 0 chr5 94483937 94483962 -108601570 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 94484011 94484039 -108601493 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 94484355 94484397 -108601135 + AT_rich Low_complexity Low_complexity 1 42 0 1111 261 38 51 chr5 94484595 94484990 -108600542 + MLT1B LTR MaLR 1 390 0 191 361 0 0 chr5 94486646 94486707 -108598825 - L2 LINE L2 -30 3283 3223 212 383 100 36 chr5 94486821 94487369 -108598163 - L2 LINE L2 -337 2977 2395 212 310 106 9 chr5 94487519 94487632 -108597900 + MIR SINE MIR 17 140 -122 3419 33 3 0 chr5 94487638 94488153 -108597379 - L1P2 LINE L1 -673 5482 4967 300 316 103 19 chr5 94488170 94488325 -108597207 - L1MEc LINE L1 -5479 917 750 380 358 81 10 chr5 94488498 94488892 -108596640 - L1MEc LINE L1 -5915 481 60 191 361 0 0 chr5 94490619 94490680 -108594852 - L2 LINE L2 -30 3283 3223 219 368 105 47 chr5 94490796 94491347 -108594185 - L2 LINE L2 -337 2977 2395 212 310 106 9 chr5 94491500 94491613 -108593919 + MIR SINE MIR 17 140 -122 3342 21 7 0 chr5 94491619 94492109 -108593423 - L1P2 LINE L1 -673 5482 4990 3224 35 2 26 chr5 94492109 94492565 -108592967 + L1PA4 LINE L1 5727 6174 0 210 105 0 0 chr5 94493460 94493498 -108592034 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 213 305 229 34 chr5 94493779 94494041 -108591491 - L2 LINE L2 -1279 2035 1723 27 29 0 0 chr5 94494107 94494141 -108591391 + AT_rich Low_complexity Low_complexity 1 34 0 33 25 0 0 chr5 94494475 94494515 -108591017 + AT_rich Low_complexity Low_complexity 1 40 0 13594 186 27 20 chr5 94494790 94497532 -108588000 - L1MA3 LINE L1 0 7724 5002 212 0 36 0 chr5 94497532 94497560 -108587972 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 13594 186 27 20 chr5 94497560 94497629 -108587903 - L1MA3 LINE L1 -2722 5002 4935 2675 32 0 0 chr5 94497629 94497940 -108587592 - AluY SINE Alu 0 311 1 13594 186 27 20 chr5 94497940 94500336 -108585196 - L1MA3 LINE L1 -2789 4935 2101 2667 184 76 6 chr5 94500331 94500843 -108584689 - L1MA3 LINE L1 -6996 569 22 * 36 40 0 0 chr5 94502281 94502331 -108583201 + AT_rich Low_complexity Low_complexity 1 50 0 4327 178 56 19 chr5 94502331 94503504 -108582028 - L1PBa LINE L1 -3038 3824 2612 300 369 9 0 chr5 94503504 94503615 -108581917 - MIR SINE MIR -77 185 74 1608 244 55 34 chr5 94504235 94504710 -108580822 + L1MC/D LINE L1 695 1179 -5230 784 183 37 0 chr5 94504709 94504873 -108580659 + L1MA7 LINE L1 5871 6040 -251 * 649 129 38 0 chr5 94504902 94505034 -108580498 + L1MA7 LINE L1 6154 6290 -1 694 282 57 19 chr5 94505098 94505470 -108580062 + L1MC/D LINE L1 4529 4914 -1492 1880 71 4 4 chr5 94505484 94505724 -108579808 + AluSp SINE Alu 1 240 -73 27 81 0 0 chr5 94506238 94506300 -108579232 + AT_rich Low_complexity Low_complexity 1 62 0 1895 165 30 30 chr5 94508137 94508536 -108576996 - L1MA6 LINE L1 -3 6297 5899 234 352 55 20 chr5 94508739 94508938 -108576594 + L1MC/D LINE L1 5644 5849 -532 243 256 73 12 chr5 94509011 94509093 -108576439 + L1MC/D LINE L1 5953 6039 -2029 23 68 0 0 chr5 94509984 94510028 -108575504 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr5 94510223 94510251 -108575281 + AT_rich Low_complexity Low_complexity 1 28 0 858 203 0 0 chr5 94510367 94510530 -108575002 + L1PA16 LINE L1 6002 6164 -2 26 0 0 0 chr5 94510700 94510726 -108574806 + AT_rich Low_complexity Low_complexity 1 26 0 266 49 0 24 chr5 94510962 94511003 -108574529 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr5 94511525 94511553 -108573979 + AT_rich Low_complexity Low_complexity 1 28 0 755 298 118 43 chr5 94512863 94513046 -108572486 + LTR50 LTR ERVL 3 171 -624 198 0 0 0 chr5 94513046 94513068 -108572464 + (TTA)n Simple_repeat Simple_repeat 3 24 0 2336 103 0 46 chr5 94513068 94513395 -108572137 - L1PA7 LINE L1 -18 6136 5826 2352 63 3 10 chr5 94513395 94513694 -108571838 - AluY SINE Alu -14 297 1 2336 103 0 46 chr5 94513694 94513736 -108571796 - L1PA7 LINE L1 -328 5826 5784 755 298 118 43 chr5 94513736 94513990 -108571542 + LTR50 LTR ERVL 170 474 -321 1125 274 72 40 chr5 94514004 94514503 -108571029 - LTR40a LTR ERVL -2 517 3 837 230 57 90 chr5 94514505 94514937 -108570595 - HERVL40 LTR ERVL 0 5530 2715 25 31 0 0 chr5 94515137 94515169 -108570363 + AT_rich Low_complexity Low_complexity 1 32 0 421 278 68 9 chr5 94515649 94515812 -108569720 - HERVL40 LTR ERVL -673 4659 2202 799 303 47 8 chr5 94515927 94516181 -108569351 - HERVL40 LTR ERVL -1127 4403 4140 1505 287 58 21 chr5 94516256 94517029 -108568503 - HERVL40 LTR ERVL -1847 3683 2851 27 73 0 0 chr5 94517217 94517272 -108568260 + AT_rich Low_complexity Low_complexity 1 55 0 2785 100 2 2 chr5 94517356 94517756 -108567776 - L1PA11 LINE L1 -6 6168 5769 * 14858 44 10 0 chr5 94517753 94520373 -108565159 - L1PA5 LINE L1 -2 6152 3513 2593 102 5 13 chr5 94520375 94520758 -108564774 - L1PA11 LINE L1 -395 5779 5400 15384 123 33 5 chr5 94520873 94524187 -108561345 + L1PA8 LINE L1 2754 6161 -11 419 324 81 7 chr5 94524203 94524475 -108561057 + L1ME LINE L1 5511 5802 -319 186 214 34 0 chr5 94524969 94525058 -108560474 + (TA)n Simple_repeat Simple_repeat 1 92 0 305 209 0 44 chr5 94525060 94525151 -108560381 - L1MC4 LINE L1 -1342 6700 6614 302 218 26 0 chr5 94525083 94525161 -108560371 + L1MC4 LINE L1 6624 6703 -1339 * 270 206 0 0 chr5 94525161 94525224 -108560308 + (TA)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr5 94527235 94527266 -108558266 + AT_rich Low_complexity Low_complexity 1 31 0 358 265 68 20 chr5 94527660 94527807 -108557725 + MLT1K LTR MaLR 434 587 -1 180 312 21 54 chr5 94528448 94528541 -108556991 + L3 LINE CR1 430 519 -1058 1923 131 0 24 chr5 94528717 94529038 -108556494 + AluSq SINE Alu 1 314 0 1468 198 7 14 chr5 94529749 94529879 -108555653 + AluJb SINE Alu 7 136 -178 2214 98 3 7 chr5 94529879 94530184 -108555348 + AluY SINE Alu 1 304 -7 1468 198 7 14 chr5 94530184 94530363 -108555169 + AluJb SINE Alu 136 314 0 201 74 0 0 chr5 94530417 94530444 -108555088 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 765 214 26 7 chr5 94530445 94530599 -108554933 - FAM SINE Alu -23 162 6 182 407 57 7 chr5 94530710 94530850 -108554682 - L2 LINE L2 -474 2840 2694 22 56 0 0 chr5 94531555 94531591 -108553941 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 94531739 94531763 -108553769 + AT_rich Low_complexity Low_complexity 1 24 0 23 97 0 0 chr5 94532179 94532251 -108553281 + AT_rich Low_complexity Low_complexity 1 72 0 925 279 49 42 chr5 94532276 94532429 -108553103 - LTR38 LTR ERV1 0 556 406 2125 106 10 0 chr5 94532429 94532730 -108552802 - AluY SINE Alu -7 304 1 925 279 49 42 chr5 94532730 94532981 -108552551 - LTR38 LTR ERV1 -150 406 149 712 197 0 0 chr5 94533082 94533209 -108552323 + FLAM_C SINE Alu 5 131 -2 785 206 41 12 chr5 94533219 94533389 -108552143 + AluJb SINE Alu 92 266 -46 239 53 0 26 chr5 94533400 94533438 -108552094 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 488 124 4 9 chr5 94533657 94533740 -108551792 - MER50-int LTR ERV1 -1103 6315 5729 1796 175 16 3 chr5 94533765 94534073 -108551459 - AluJb SINE Alu 0 312 1 468 191 17 78 chr5 94534098 94534213 -108551319 - MER50-int LTR ERV1 -2283 5837 5730 * 1225 135 27 39 chr5 94534197 94534456 -108551076 + LTR49-int LTR ERV1 5504 5759 -572 2203 91 17 7 chr5 94534458 94534754 -108550778 - AluY SINE Alu -12 299 1 390 94 0 0 chr5 94534756 94534809 -108550723 - MSTA LTR MaLR -375 53 1 4469 191 35 17 chr5 94534998 94535871 -108549661 - MER4D LTR ERV1 -14 889 1 7254 152 58 68 chr5 94535872 94537233 -108548299 - MER4D-int LTR ERV1 0 6758 5413 2386 55 13 19 chr5 94537233 94537545 -108547987 + AluY SINE Alu 1 310 -1 7254 152 58 68 chr5 94537545 94537824 -108547708 - MER4D-int LTR ERV1 -1345 5413 5133 * 8523 139 6 23 chr5 94537803 94538571 -108546961 - MER4D-int LTR ERV1 -1870 4888 4151 2152 86 4 0 chr5 94538571 94538888 -108546644 - AluSp SINE Alu 0 322 5 8523 139 6 23 chr5 94538888 94539531 -108546001 - MER4D-int LTR ERV1 -2607 4151 3499 4038 159 24 14 chr5 94539531 94539790 -108545742 + MER50 LTR ERV1 1 256 -478 2086 124 10 0 chr5 94539790 94540096 -108545436 + AluSq SINE Alu 1 309 -4 4038 159 24 14 chr5 94540096 94540540 -108544992 + MER50 LTR ERV1 256 711 -23 4801 171 38 38 chr5 94540542 94541618 -108543914 - MER4D-int LTR ERV1 -3257 3501 1192 757 251 83 40 chr5 94541720 94542118 -108543414 + LTR38B LTR ERV1 177 591 -19 1001 201 39 26 chr5 94542807 94543036 -108542496 - LTR29 LTR ERV1 -1 621 390 * 1238 168 86 48 chr5 94543021 94543336 -108542196 - LTR49 LTR ERV1 -268 327 1 205 277 0 0 chr5 94543439 94543486 -108542046 + MIR3 SINE MIR 137 183 -25 2976 176 43 67 chr5 94543910 94544615 -108540917 + LTR8 LTR ERV1 2 689 -2 21 0 0 0 chr5 94545388 94545409 -108540123 + AT_rich Low_complexity Low_complexity 1 21 0 807 157 0 15 chr5 94545476 94545610 -108539922 + AluJ SINE Alu 1 132 -170 257 163 0 0 chr5 94545610 94545651 -108539881 + AluJ SINE Alu 134 174 -128 1998 217 143 28 chr5 94545651 94546300 -108539232 - MER50 LTR ERV1 0 734 11 311 172 0 0 chr5 94546306 94546364 -108539168 + AluJ SINE Alu 171 228 -74 2278 104 0 0 chr5 94547424 94547723 -108537809 - AluSx SINE Alu -13 299 1 26 0 0 0 chr5 94550324 94550350 -108535182 + AT_rich Low_complexity Low_complexity 1 26 0 692 301 66 54 chr5 94550508 94551117 -108534415 - L1MEc LINE L1 -5736 660 45 21 0 0 0 chr5 94552904 94552925 -108532607 + AT_rich Low_complexity Low_complexity 1 21 0 1201 171 5 5 chr5 94552925 94553130 -108532402 - AluJb SINE Alu -27 285 81 27 81 0 0 chr5 94553393 94553455 -108532077 + AT_rich Low_complexity Low_complexity 1 62 0 1190 99 154 6 chr5 94554205 94554387 -108531145 - AluSg SINE Alu -101 209 1 256 319 169 0 chr5 94554391 94554557 -108530975 - MIR SINE MIR -56 206 13 1855 336 64 22 chr5 94554917 94555115 -108530417 - L2 LINE L2 -1318 1996 1808 189 0 0 0 chr5 94555115 94555136 -108530396 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1855 336 64 22 chr5 94555136 94555770 -108529762 - L2 LINE L2 -1506 1808 1129 417 233 63 25 chr5 94555847 94556006 -108529526 - MIR SINE MIR -34 228 64 521 325 12 0 chr5 94556405 94556565 -108528967 + L2 LINE L2 2061 2222 -1092 471 340 14 19 chr5 94556751 94556963 -108528569 - MLT1I LTR MaLR -196 213 3 714 291 102 59 chr5 94556966 94557027 -108528505 + L2 LINE L2 2213 2270 -1044 1973 115 3 48 chr5 94557027 94557339 -108528193 - AluSx SINE Alu -12 300 3 714 291 102 59 chr5 94557339 94557651 -108527881 + L2 LINE L2 2270 2602 -712 2691 106 46 28 chr5 94557856 94558263 -108527269 - L1P4 LINE L1 -403 5762 5345 1839 160 7 7 chr5 94558263 94558575 -108526957 + AluSg SINE Alu 2 294 -16 2691 106 46 28 chr5 94558575 94558603 -108526929 - L1P4 LINE L1 -820 5345 5319 2363 132 19 3 chr5 94558603 94558974 -108526558 + L1PA15 LINE L1 5788 6165 0 292 290 50 10 chr5 94558992 94559092 -108526440 + L2 LINE L2 2857 2960 -353 1145 219 8 16 chr5 94559093 94559349 -108526183 + L1MD3 LINE L1 7415 7668 -327 22 0 0 0 chr5 94559422 94559444 -108526088 + AT_rich Low_complexity Low_complexity 1 22 0 226 312 138 64 chr5 94559852 94560070 -108525462 - L2 LINE L2 -2032 1282 1049 1812 116 16 0 chr5 94560416 94560666 -108524866 + AluSg SINE Alu 43 296 -14 2008 211 15 25 chr5 94560682 94561090 -108524442 - MSTB LTR MaLR -8 418 15 1337 180 93 13 chr5 94561092 94561403 -108524129 + MER44D DNA MER2_type 2 607 -2 182 350 75 33 chr5 94563067 94563187 -108522345 + MIR SINE MIR 20 144 -118 1673 195 32 85 chr5 94563358 94563571 -108521961 + MLT1C LTR MaLR 1 224 -243 2267 91 0 3 chr5 94563571 94563869 -108521663 + AluSg SINE Alu 2 298 -12 1673 195 32 85 chr5 94563869 94564148 -108521384 + MLT1C LTR MaLR 224 467 0 364 159 43 0 chr5 94564663 94564732 -108520800 - MIR SINE MIR -1 261 190 297 294 55 43 chr5 94565308 94565471 -108520061 + MIR3 SINE MIR 44 208 0 34 42 0 0 chr5 94566236 94566284 -108519248 + AT_rich Low_complexity Low_complexity 1 48 0 1820 132 0 37 chr5 94566337 94566633 -108518899 + AluSq SINE Alu 1 285 -28 460 313 105 81 chr5 94566641 94566924 -108518608 - L1MEd LINE L1 -4862 1257 982 2441 181 34 11 chr5 94566924 94567450 -108518082 - MER34 LTR ERV1 0 542 5 460 313 105 81 chr5 94567450 94567795 -108517737 - L1MEd LINE L1 -5137 982 614 254 313 0 0 chr5 94567873 94567937 -108517595 - L1MEd LINE L1 -5616 503 440 3297 199 68 17 chr5 94568028 94568905 -108516627 - L1MB4 LINE L1 -1 6179 5258 1069 235 70 83 chr5 94568909 94569721 -108515811 - LTR1B LTR ERV1 0 1020 130 437 127 0 0 chr5 94569720 94569783 -108515749 - Tigger4(Zombi) DNA MER2_type -2668 63 1 * 276 175 0 35 chr5 94569783 94569839 -108515693 - MLT1A1 LTR MaLR -311 54 1 3405 237 53 23 chr5 94569839 94571449 -108514083 - L1M4c LINE L1 -3921 2725 983 241 273 30 10 chr5 94571478 94571577 -108513955 - L1M4c LINE L1 -5622 920 820 552 334 55 60 chr5 94571694 94572382 -108513150 - L1M4c LINE L1 -5844 698 14 351 113 0 0 chr5 94572601 94572654 -108512878 + (TG)n Simple_repeat Simple_repeat 2 54 0 258 116 0 0 chr5 94572659 94572702 -108512830 + (TCTCTG)n Simple_repeat Simple_repeat 4 46 0 2189 112 0 10 chr5 94572929 94573242 -108512290 - AluSx SINE Alu -2 310 1 533 97 9 12 chr5 94573610 94573837 -108511695 - AluSc SINE Alu -16 293 1 23 33 0 0 chr5 94573996 94574026 -108511506 + AT_rich Low_complexity Low_complexity 1 30 0 234 294 43 0 chr5 94574569 94574661 -108510871 - MLT1H LTR MaLR 0 549 454 1781 188 139 5 chr5 94574665 94575038 -108510494 - MSTA LTR MaLR -5 423 1 8026 198 27 9 chr5 94575038 94576659 -108508873 - MSTA-int LTR MaLR 0 1651 1 1907 150 120 30 chr5 94576659 94577052 -108508480 - MSTA LTR MaLR 0 428 1 401 279 108 58 chr5 94577147 94577443 -108508089 - MLT1H LTR MaLR -116 293 1 308 218 116 20 chr5 94579530 94579677 -108505855 + L1M4 LINE L1 2147 2307 -3839 698 240 81 4 chr5 94579683 94579941 -108505591 - Charlie1 DNA MER1_type 0 2761 2484 21 0 0 0 chr5 94579956 94579977 -108505555 + AT_rich Low_complexity Low_complexity 1 21 0 528 329 14 40 chr5 94580660 94580882 -108504650 + MIR SINE MIR 47 262 0 450 141 32 17 chr5 94581758 94582042 -108503490 + (TATAA)n Simple_repeat Simple_repeat 1 288 0 522 62 94 0 chr5 94582042 94582202 -108503330 + (TA)n Simple_repeat Simple_repeat 2 176 0 2729 178 39 2 chr5 94582205 94582739 -108502793 - Tigger1 DNA MER2_type -276 2142 1589 5480 118 33 10 chr5 94582740 94583708 -108501824 + L1PA14 LINE L1 5173 6160 -1 1179 164 5 0 chr5 94583719 94583914 -108501618 - Tigger1 DNA MER2_type -1171 1247 1052 * 1286 171 32 0 chr5 94583911 94584162 -108501370 - Tigger1 DNA MER2_type -1761 657 399 2221 177 20 7 chr5 94584574 94584980 -108500552 - Tigger1 DNA MER2_type -2005 413 3 22 56 0 0 chr5 94585139 94585175 -108500357 + AT_rich Low_complexity Low_complexity 1 36 0 3814 151 11 0 chr5 94585187 94585817 -108499715 - L1PA16 LINE L1 -16 6150 5514 1182 225 8 48 chr5 94585819 94585942 -108499590 - L1P LINE L1 -2939 3207 3081 2251 104 0 3 chr5 94585942 94586250 -108499282 - AluSc SINE Alu -2 307 1 1182 225 8 48 chr5 94586250 94586481 -108499051 - L1P LINE L1 -3065 3081 2867 25 0 0 0 chr5 94586501 94586526 -108499006 + AT_rich Low_complexity Low_complexity 1 25 0 289 219 96 0 chr5 94586536 94586609 -108498923 + MIR SINE MIR 125 204 -58 249 267 44 0 chr5 94586759 94586849 -108498683 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 2425 154 18 23 chr5 94587279 94587715 -108497817 + Tigger2a DNA MER2_type 1 434 0 495 167 110 10 chr5 94587747 94587867 -108497665 + MLT1E3 LTR MaLR 80 204 -420 670 258 122 61 chr5 94588014 94588928 -108496604 + L1MCc LINE L1 1226 2418 -4564 27 29 0 0 chr5 94588939 94588973 -108496559 + AT_rich Low_complexity Low_complexity 1 34 0 299 246 138 36 chr5 94589233 94589371 -108496161 - LTR50 LTR ERVL -119 676 525 6093 138 17 12 chr5 94589371 94590453 -108495079 + L1MA3 LINE L1 5219 6305 0 1248 248 91 22 chr5 94590581 94590988 -108494544 - LTR68 LTR ERV1 -5 735 301 711 262 84 23 chr5 94591124 94591297 -108494235 - LTR68 LTR ERV1 -461 279 83 1655 218 11 16 chr5 94591297 94591664 -108493868 + MLT1A1 LTR MaLR 1 365 0 711 262 84 23 chr5 94591664 94591753 -108493779 - LTR68 LTR ERV1 -657 83 1 822 251 89 37 chr5 94591805 94592008 -108493524 - LTR50 LTR ERVL -452 343 115 762 86 94 8 chr5 94592008 94592136 -108493396 - MER85 DNA T2_type 0 139 1 822 251 89 37 chr5 94592136 94592258 -108493274 - LTR50 LTR ERVL -680 115 1 24 32 0 0 chr5 94592382 94592413 -108493119 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr5 94592512 94592542 -108492990 + AT_rich Low_complexity Low_complexity 1 30 0 2212 63 0 54 chr5 94593034 94593349 -108492183 - AluY SINE Alu -13 298 1 571 271 108 20 chr5 94593479 94593774 -108491758 - LTR52 LTR ERVL -100 321 1 24 0 0 0 chr5 94594192 94594216 -108491316 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr5 94594230 94594257 -108491275 + AT_rich Low_complexity Low_complexity 1 27 0 224 302 203 22 chr5 94594878 94595110 -108490422 - L2 LINE L2 -816 2498 2225 1719 204 51 6 chr5 94595188 94595540 -108489992 + L1MCa LINE L1 22 389 -6037 329 254 45 9 chr5 94595541 94595651 -108489881 + LTR33 LTR ERVL 394 507 -14 21 0 0 0 chr5 94596353 94596374 -108489158 + AT_rich Low_complexity Low_complexity 1 21 0 833 379 48 14 chr5 94596807 94597451 -108488081 + HERVL LTR ERVL 1619 2284 -3480 461 396 18 0 chr5 94597478 94597751 -108487781 + HERVL LTR ERVL 2472 2749 -3015 1495 304 49 41 chr5 94597769 94598357 -108487175 - MLT2F LTR ERVL -70 593 1 1133 349 87 8 chr5 94598362 94598996 -108486536 + HERVL LTR ERVL 3177 3860 -1904 645 373 7 7 chr5 94599005 94599284 -108486248 + HERVL LTR ERVL 3961 4239 -1525 324 334 44 23 chr5 94599318 94599551 -108485981 + HERVL LTR ERVL 4281 4569 -1195 889 223 42 132 chr5 94599551 94599960 -108485572 - MLT1A2 LTR MaLR -2 372 1 324 334 44 23 chr5 94599960 94600085 -108485447 + HERVL LTR ERVL 4569 4690 -1074 26 0 0 0 chr5 94600146 94600172 -108485360 + AT_rich Low_complexity Low_complexity 1 26 0 465 19 0 0 chr5 94600290 94600344 -108485188 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 238 174 29 58 chr5 94601635 94601704 -108483828 + T-rich Low_complexity Low_complexity 3 69 0 23 33 0 0 chr5 94601925 94601955 -108483577 + AT_rich Low_complexity Low_complexity 1 30 0 2058 106 35 0 chr5 94602107 94602391 -108483141 - AluSg SINE Alu -16 294 1 2341 114 5 8 chr5 94602660 94603038 -108482494 - L1PB1 LINE L1 -2 6149 5773 21 0 0 0 chr5 94603038 94603059 -108482473 + AT_rich Low_complexity Low_complexity 1 21 0 11316 197 31 6 chr5 94603071 94603086 -108482446 - L1PB1 LINE L1 -358 5793 5780 431 15 59 0 chr5 94603086 94603154 -108482378 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 11316 197 31 6 chr5 94603154 94606240 -108479292 - L1PB1 LINE L1 -371 5780 2611 197 393 29 58 chr5 94607056 94607229 -108478303 + L2 LINE L2 3097 3264 -8 959 186 21 5 chr5 94608895 94609083 -108476449 + AluJo SINE Alu 89 279 -33 26 64 0 0 chr5 94609304 94609351 -108476181 + AT_rich Low_complexity Low_complexity 1 47 0 233 372 85 0 chr5 94609380 94609474 -108476058 - L2 LINE L2 -34 3279 3178 26 98 0 0 chr5 94609539 94609621 -108475911 + AT_rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr5 94609685 94609710 -108475822 + AT_rich Low_complexity Low_complexity 1 25 0 189 147 0 0 chr5 94611100 94611134 -108474398 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 681 98 41 0 chr5 94611164 94611287 -108474245 + CT-rich Low_complexity Low_complexity 4 131 0 215 268 10 0 chr5 94611977 94612074 -108473458 + (TA)n Simple_repeat Simple_repeat 1 98 0 186 209 0 0 chr5 94613351 94613394 -108472138 + (TA)n Simple_repeat Simple_repeat 2 44 0 228 86 0 0 chr5 94614044 94614079 -108471453 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1006 367 77 18 chr5 94614306 94615565 -108469967 + MERVL LTR ERVL 1867 3208 -2277 1538 216 21 13 chr5 94615671 94615996 -108469536 + MLT1A1 LTR MaLR 23 365 0 297 339 68 31 chr5 94616056 94616248 -108469284 + MERVL LTR ERVL 3580 3778 -1876 275 304 52 17 chr5 94617269 94617384 -108468148 - MIR3 SINE MIR -14 194 76 391 271 36 0 chr5 94617385 94617525 -108468007 + MER103 DNA DNA 7 151 -15 451 221 44 9 chr5 94617745 94617858 -108467674 + L1M1 LINE L1 18 134 -7431 * 9025 173 32 3 chr5 94617856 94619404 -108466128 + L1M1 LINE L1 793 2384 -5181 493 348 153 35 chr5 94620627 94621170 -108464362 + L2 LINE L2 1835 2441 -873 499 204 10 0 chr5 94621215 94621318 -108464214 + MLT1D LTR MaLR 402 505 0 1413 207 113 9 chr5 94621702 94622031 -108463501 - MLT1A1 LTR MaLR 0 365 3 420 316 52 43 chr5 94622128 94622359 -108463173 + MIR SINE MIR 30 262 0 1000 240 20 55 chr5 94623522 94623776 -108461756 - MLT1A1 LTR MaLR 0 365 121 704 269 34 10 chr5 94623767 94624083 -108461449 - MLT1A1 LTR MaLR -4 361 2 * 516 193 23 40 chr5 94624083 94624207 -108461325 - MLT1A1 LTR MaLR -232 133 1 372 354 42 29 chr5 94624294 94624662 -108460870 - LTR16C LTR ERVL 0 491 89 313 352 59 44 chr5 94625301 94625707 -108459825 - L1M4 LINE L1 -2324 3822 3411 21 0 0 0 chr5 94625843 94625864 -108459668 + AT_rich Low_complexity Low_complexity 1 21 0 1315 194 84 15 chr5 94626217 94626577 -108458955 - MER67C LTR ERV1 -242 272 16 330 320 52 79 chr5 94628732 94629098 -108456434 - L1M4 LINE L1 -3622 2524 2169 220 299 149 0 chr5 94629292 94629379 -108456153 - L2 LINE L2 -24 3289 3190 293 262 33 74 chr5 94629714 94629836 -108455696 + MER21B LTR ERV1 567 683 -180 589 232 12 172 chr5 94629866 94630185 -108455347 + MLT1A1 LTR MaLR 3 270 -95 2105 96 0 7 chr5 94630299 94630580 -108454952 - AluSg SINE Alu -31 279 1 362 302 120 44 chr5 94630582 94630807 -108454725 - L1ME3A LINE L1 -297 5873 5632 252 273 55 36 chr5 94630815 94630925 -108454607 - L1ME3A LINE L1 -580 5582 5471 455 268 83 57 chr5 94631001 94631266 -108454266 - L1ME3A LINE L1 -763 5383 5112 22 0 0 0 chr5 94633526 94633548 -108451984 + AT_rich Low_complexity Low_complexity 1 22 0 351 292 153 51 chr5 94634087 94634559 -108450973 - L1MC/D LINE L1 -1991 5817 5298 29 47 0 0 chr5 94634790 94634833 -108450699 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr5 94635286 94635315 -108450217 + AT_rich Low_complexity Low_complexity 1 29 0 847 53 0 68 chr5 94637107 94637239 -108448293 - AluSq/x SINE Alu -182 130 8 534 284 32 27 chr5 94637249 94637622 -108447910 + L1M4 LINE L1 2790 3164 -2982 215 200 0 0 chr5 94637729 94637764 -108447768 + MER5A DNA MER1_type 132 166 -23 592 252 28 8 chr5 94638828 94639353 -108446179 - L1M4 LINE L1 -708 5476 4827 525 287 24 12 chr5 94639354 94639518 -108446014 - L1M4 LINE L1 -1994 4152 3987 1479 152 4 0 chr5 94639526 94639756 -108445776 + THE1B LTR MaLR 3 233 -131 194 191 0 15 chr5 94639905 94639973 -108445559 + CT-rich Low_complexity Low_complexity 2 68 0 3814 71 0 22 chr5 94640203 94640739 -108444793 - L1PA4 LINE L1 -141 6014 5491 1295 192 22 32 chr5 94640746 94641059 -108444473 - AluJo SINE Alu -2 310 1 280 326 67 34 chr5 94641264 94641442 -108444090 + MER89-int LTR ERV1 6305 6488 -313 1163 153 26 22 chr5 94641690 94641919 -108443613 + L1MA8 LINE L1 6056 6285 -6 1754 116 8 8 chr5 94642034 94642293 -108443239 + AluSg SINE Alu 37 295 -15 2162 110 10 7 chr5 94644259 94644569 -108440963 + AluSx SINE Alu 2 312 0 252 188 0 47 chr5 94645956 94646020 -108439512 + L1MA1 LINE L1 6242 6302 0 203 200 0 0 chr5 94646750 94646785 -108438747 + (TA)n Simple_repeat Simple_repeat 1 35 0 555 73 0 24 chr5 94648442 94648557 -108436975 - L1PA6 LINE L1 0 6154 6069 1286 242 33 22 chr5 94648579 94648749 -108436783 + MLT1A2 LTR MaLR 1 168 -206 267 31 0 0 chr5 94648749 94648781 -108436751 + (TC)n Simple_repeat Simple_repeat 1 32 0 1286 242 33 22 chr5 94648781 94648978 -108436554 + MLT1A2 LTR MaLR 168 372 -2 2304 174 17 9 chr5 94649281 94649741 -108435791 + L1MA3 LINE L1 5767 6230 -75 257 303 20 10 chr5 94650153 94650252 -108435280 + MLT1J LTR MaLR 406 505 -6 180 0 0 0 chr5 94650857 94650877 -108434655 + (A)n Simple_repeat Simple_repeat 1 20 0 1702 185 0 7 chr5 94650881 94651184 -108434348 + AluJb SINE Alu 1 301 -11 270 0 0 0 chr5 94651260 94651290 -108434242 + (TTA)n Simple_repeat Simple_repeat 2 31 0 270 56 0 0 chr5 94651826 94651846 -108433686 + (TG)n Simple_repeat Simple_repeat 1 56 0 270 56 0 0 chr5 94651846 94651882 -108433650 + (TG)n Simple_repeat Simple_repeat 1 36 0 208 355 13 0 chr5 94653449 94653525 -108432007 + MIR3 SINE MIR 125 201 -7 1148 230 112 20 chr5 94654387 94654691 -108430841 + MER44D DNA MER2_type 1 602 -7 240 94 0 172 chr5 94655868 94655898 -108429634 - MLT2B3 LTR ERVL 0 520 505 1545 175 61 19 chr5 94655898 94656258 -108429274 + THE1C LTR MaLR 1 375 0 240 94 0 172 chr5 94656258 94656291 -108429241 - MLT2B3 LTR ERVL -15 505 468 215 102 34 34 chr5 94656291 94656350 -108429182 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 2398 220 30 18 chr5 94656350 94656859 -108428673 - MLT2B3 LTR ERVL -39 515 1 35 63 0 0 chr5 94656895 94656958 -108428574 + AT_rich Low_complexity Low_complexity 1 63 0 911 267 77 34 chr5 94657321 94657695 -108427837 + MER110A LTR ERV1 40 429 -39 960 273 105 24 chr5 94657695 94658065 -108427467 - MER57B LTR ERV1 -1 433 34 541 241 116 20 chr5 94658899 94659098 -108426434 + L1ME2 LINE L1 5931 6148 -16 194 321 73 18 chr5 94661010 94661119 -108424413 + L2 LINE L2 3199 3313 0 5141 208 29 8 chr5 94661779 94662835 -108422697 + L1M1 LINE L1 7 1085 -6480 255 371 48 8 chr5 94662837 94662961 -108422571 - MER5A DNA MER1_type -1 188 60 33 0 0 0 chr5 94663703 94663736 -108421796 + AT_rich Low_complexity Low_complexity 1 33 0 212 0 36 0 chr5 94664695 94664723 -108420809 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4990 212 25 7 chr5 94664724 94666116 -108419416 + L1PA15-16 LINE L1 10 1654 -5195 211 133 96 12 chr5 94666138 94666304 -108419228 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 75 96 11 chr5 94666362 94666456 -108419076 + (TA)n Simple_repeat Simple_repeat 1 102 0 51 17 0 0 chr5 94666592 94666650 -108418882 + AT_rich Low_complexity Low_complexity 1 58 0 213 211 42 0 chr5 94666650 94666721 -108418811 + (TA)n Simple_repeat Simple_repeat 1 74 0 7312 193 9 24 chr5 94666742 94668006 -108417526 + L1PA15-16 LINE L1 1666 2896 -3953 2180 112 3 10 chr5 94668006 94668310 -108417222 + AluSp SINE Alu 3 304 -9 7312 193 9 24 chr5 94668310 94668930 -108416602 + L1PA15-16 LINE L1 2896 3524 -3325 3518 237 37 34 chr5 94669033 94670085 -108415447 + L1 LINE L1 3903 4957 -1892 2920 234 99 36 chr5 94670086 94671191 -108414341 - L1M4c LINE L1 -4502 2144 971 235 288 97 108 chr5 94671339 94671753 -108413779 - L1M4c LINE L1 -5766 776 372 1631 194 3 10 chr5 94671753 94672063 -108413469 - AluJb SINE Alu -4 308 1 235 288 97 108 chr5 94672063 94672429 -108413103 - L1M4c LINE L1 -6170 372 4 25 83 0 0 chr5 94673210 94673270 -108412262 + AT_rich Low_complexity Low_complexity 1 60 0 198 0 0 0 chr5 94674280 94674302 -108411230 + (TG)n Simple_repeat Simple_repeat 1 22 0 2051 183 51 47 chr5 94674620 94675112 -108410420 - LTR1 LTR ERV1 -291 494 1 24 53 0 0 chr5 94675180 94675218 -108410314 + AT_rich Low_complexity Low_complexity 1 38 0 6207 243 29 54 chr5 94675349 94679034 -108406498 + L1PA12 LINE L1 1 4120 -3464 526 238 19 0 chr5 94679288 94679448 -108406084 - L1M4 LINE L1 -2091 4553 4391 1226 256 35 22 chr5 94679480 94680075 -108405457 - L1M4 LINE L1 -2689 3955 3353 382 270 0 18 chr5 94680058 94680169 -108405363 - L1M4 LINE L1 -6420 122 14 * 28 61 0 0 chr5 94680457 94680506 -108405026 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr5 94680808 94680833 -108404699 + AT_rich Low_complexity Low_complexity 1 25 0 2182 55 0 4 chr5 94681848 94682119 -108403413 + AluY SINE Alu 39 308 -3 414 257 162 26 chr5 94682527 94682792 -108402740 + L1ME3A LINE L1 2647 2947 -3199 1045 316 56 21 chr5 94683085 94683839 -108401693 + L1ME3A LINE L1 5166 5955 -215 645 251 75 6 chr5 94683909 94684187 -108401345 - L1M4 LINE L1 -1299 4847 4535 358 237 0 0 chr5 94684388 94684464 -108401068 + HAL1 LINE L1 1562 1637 -870 450 208 30 0 chr5 94684986 94685087 -108400445 + L1MC2 LINE L1 6240 6343 -1 283 303 26 13 chr5 94685093 94685245 -108400287 + L1M4 LINE L1 2511 2664 -3482 1133 259 48 23 chr5 94735465 94735902 -108349630 + L1ME LINE L1 388 835 -5235 2100 176 52 28 chr5 94736046 94736546 -108348986 + L1 LINE L1 4847 5358 -788 6235 101 13 6 chr5 94736556 94738028 -108347504 + L1PA8 LINE L1 4692 6170 -2 29 0 0 0 chr5 94740406 94740435 -108345097 + AT_rich Low_complexity Low_complexity 1 29 0 1584 159 66 24 chr5 94740649 94740938 -108344594 + AluJb SINE Alu 1 301 -11 337 286 26 32 chr5 94742437 94742591 -108342941 + LTR16C LTR ERVL 339 491 0 2234 90 0 6 chr5 94742891 94743202 -108342330 - AluY SINE Alu -2 309 1 218 295 213 16 chr5 94743674 94743796 -108341736 + L2 LINE L2 3168 3313 0 188 0 74 0 chr5 94745737 94745764 -108339768 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 336 190 0 0 chr5 94746124 94746203 -108339329 + (TA)n Simple_repeat Simple_repeat 2 80 0 210 71 0 0 chr5 94746204 94746232 -108339300 + (GA)n Simple_repeat Simple_repeat 1 28 0 27 29 0 0 chr5 94747072 94747106 -108338426 + AT_rich Low_complexity Low_complexity 1 34 0 2331 47 0 20 chr5 94747595 94747896 -108337636 + AluY SINE Alu 1 295 -16 25 31 0 0 chr5 94748029 94748061 -108337471 + AT_rich Low_complexity Low_complexity 1 32 0 26 82 0 0 chr5 94748342 94748403 -108337129 + AT_rich Low_complexity Low_complexity 1 61 0 204 40 0 0 chr5 94749375 94749400 -108336132 + (CA)n Simple_repeat Simple_repeat 2 26 0 985 0 0 0 chr5 94749975 94750096 -108335436 - L1P LINE L1 -771 5384 5264 6499 26 1 0 chr5 94750096 94750861 -108334671 + L1PA3 LINE L1 5390 6155 0 39 0 0 0 chr5 94750861 94750900 -108334632 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr5 94751435 94751472 -108334060 + AT_rich Low_complexity Low_complexity 1 37 0 338 313 156 33 chr5 94752898 94753109 -108332423 - MIR SINE MIR -25 237 1 27 92 0 0 chr5 94753581 94753657 -108331875 + AT_rich Low_complexity Low_complexity 1 76 0 1624 184 58 64 chr5 94754071 94754506 -108331026 + MSTB1 LTR MaLR 1 432 0 348 331 121 16 chr5 94754803 94755051 -108330481 + L2 LINE L2 2628 2901 -413 1189 251 15 96 chr5 94755064 94755317 -108330215 - L1MEc LINE L1 -3345 3081 2809 240 35 0 0 chr5 94755317 94755346 -108330186 - Alu SINE Alu -14 287 259 1189 251 15 96 chr5 94755346 94755591 -108329941 - L1MEc LINE L1 -3617 2809 2632 2256 78 0 34 chr5 94755591 94755911 -108329621 - AluY SINE Alu -2 309 1 1189 251 15 96 chr5 94755911 94756166 -108329366 - L1MEc LINE L1 -3794 2632 2358 694 171 17 0 chr5 94756169 94756286 -108329246 - AluSg/x SINE Alu -18 294 176 389 206 0 0 chr5 94756311 94756403 -108329129 - L1MEc LINE L1 -4089 2337 2246 240 154 49 0 chr5 94756481 94756604 -108328928 + (TA)n Simple_repeat Simple_repeat 2 130 0 712 40 34 46 chr5 94756615 94756790 -108328742 + (TA)n Simple_repeat Simple_repeat 2 174 0 1001 297 76 26 chr5 94756790 94757528 -108328004 - L1MEc LINE L1 -4231 2240 1470 997 247 31 17 chr5 94757538 94757829 -108327703 - L1MEc LINE L1 -6130 296 2 1681 130 86 53 chr5 94757845 94758206 -108327326 + THE1C LTR MaLR 2 374 -1 25 0 0 0 chr5 94759288 94759313 -108326219 + AT_rich Low_complexity Low_complexity 1 25 0 273 75 0 0 chr5 94760109 94760149 -108325383 + (GTTTG)n Simple_repeat Simple_repeat 5 44 0 539 301 0 0 chr5 94760701 94760844 -108324688 + MLT1F LTR MaLR 10 152 -390 198 367 42 17 chr5 94761049 94761169 -108324363 - L2 LINE L2 -8 3305 3183 13228 85 5 6 chr5 94761220 94763866 -108321666 + L1PA6 LINE L1 3480 6143 -11 820 335 148 34 chr5 94763926 94765318 -108320214 + L2 LINE L2 1744 3312 -1 248 325 35 79 chr5 94765576 94765779 -108319753 + MIR SINE MIR 35 228 -34 277 329 81 0 chr5 94766267 94766416 -108319116 + MIR SINE MIR 102 262 0 21 0 0 0 chr5 94767826 94767847 -108317685 + AT_rich Low_complexity Low_complexity 1 21 0 761 278 132 39 chr5 94768044 94768483 -108317049 - MLT1H1 LTR MaLR -2 553 74 1948 97 35 0 chr5 94768486 94768776 -108316756 + L1MA3 LINE L1 5549 5848 -457 253 282 14 0 chr5 94768776 94768847 -108316685 - MLT1H1 LTR MaLR -483 72 1 327 171 11 23 chr5 94769051 94769139 -108316393 + GA-rich Low_complexity Low_complexity 1 87 0 2066 131 3 0 chr5 94770184 94770489 -108315043 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 94770489 94770510 -108315022 + AT_rich Low_complexity Low_complexity 1 21 0 448 265 0 0 chr5 94771282 94771384 -108314148 - L1PA16 LINE L1 -24 6142 6041 510 17 0 0 chr5 94772650 94772709 -108312823 + (TG)n Simple_repeat Simple_repeat 2 60 0 292 339 31 8 chr5 94772923 94773050 -108312482 + L3 LINE CR1 714 843 -734 188 416 0 0 chr5 94773487 94773576 -108311956 + L2 LINE L2 3225 3313 0 1823 194 156 2 chr5 94774811 94775240 -108310292 - LTR44 LTR ERV1 0 519 25 183 307 27 13 chr5 94775363 94775438 -108310094 - L2 LINE L2 -544 2770 2695 219 69 0 0 chr5 94776339 94776368 -108309164 + (TG)n Simple_repeat Simple_repeat 2 30 0 200 366 40 20 chr5 94777939 94778040 -108307492 + MIR3 SINE MIR 76 178 -30 27987 96 11 10 chr5 94778649 94781130 -108304402 - L1PA7 LINE L1 -8 6461 3983 288 0 0 0 chr5 94781130 94781162 -108304370 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 567 0 0 0 chr5 94781161 94781224 -108304308 + (TG)n Simple_repeat Simple_repeat 2 64 0 27987 96 11 10 chr5 94781162 94783672 -108301860 - L1PA7 LINE L1 -2486 3983 1532 550 87 98 11 chr5 94783684 94783776 -108301756 - L1PA7 LINE L1 -5608 853 754 2130 114 3 25 chr5 94783826 94784143 -108301389 + AluY SINE Alu 1 310 -1 22 35 0 0 chr5 94784238 94784267 -108301265 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr5 94784638 94784667 -108300865 + AT_rich Low_complexity Low_complexity 1 29 0 271 334 179 45 chr5 94785353 94785733 -108299799 + L2 LINE L2 2882 3312 -1 24 103 0 0 chr5 94786707 94786794 -108298738 + AT_rich Low_complexity Low_complexity 1 87 0 305 250 83 35 chr5 94786856 94787000 -108298532 - HAL1 LINE L1 -107 2400 2250 22 56 0 0 chr5 94787034 94787070 -108298462 + AT_rich Low_complexity Low_complexity 1 36 0 253 297 52 32 chr5 94787851 94788006 -108297526 - HAL1 LINE L1 -853 1654 1497 2229 166 14 22 chr5 94790735 94791180 -108294352 + HSMAR2 DNA Mariner 855 1295 -7 311 332 48 65 chr5 94791253 94791482 -108294050 - HAL1 LINE L1 -2281 226 2 33 25 0 0 chr5 94791503 94791543 -108293989 + AT_rich Low_complexity Low_complexity 1 40 0 182 345 67 42 chr5 94793685 94793804 -108291728 + L2 LINE L2 3138 3259 -13 186 43 0 0 chr5 94793812 94793835 -108291697 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 447 304 51 101 chr5 94796245 94796640 -108288892 - MLT1I LTR MaLR -14 395 21 2511 207 35 27 chr5 94796709 94797338 -108288194 - LTR27 LTR ERV1 0 636 3 195 267 133 15 chr5 94797338 94797473 -108288059 - MIR SINE MIR -26 236 86 2548 32 0 22 chr5 94797856 94798167 -108287365 + AluY SINE Alu 1 304 -7 23 54 0 0 chr5 94798234 94798271 -108287261 + AT_rich Low_complexity Low_complexity 1 37 0 34 42 0 0 chr5 94798325 94798373 -108287159 + AT_rich Low_complexity Low_complexity 1 48 0 26 30 0 0 chr5 94798419 94798452 -108287080 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 94798519 94798540 -108286992 + AT_rich Low_complexity Low_complexity 1 21 0 400 270 137 37 chr5 94798582 94798852 -108286680 - L1ME3A LINE L1 -264 5906 5610 1930 179 16 3 chr5 94799008 94799389 -108286143 + L1MC1 LINE L1 5947 6332 -1 234 128 0 0 chr5 94800078 94800117 -108285415 + (TG)n Simple_repeat Simple_repeat 2 40 0 207 0 0 0 chr5 94802229 94802252 -108283280 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1895 124 0 0 chr5 94802255 94802512 -108283020 - AluSx SINE Alu -23 289 33 2113 186 221 58 chr5 94802697 94803515 -108282017 + LTR28 LTR ERV1 1 1019 -1 1430 256 31 79 chr5 94803551 94804427 -108281105 - L1MC5 LINE L1 -433 7528 6695 1340 191 66 0 chr5 94804550 94804807 -108280725 - AluSx SINE Alu -9 303 30 1021 246 99 8 chr5 94804845 94805239 -108280293 + L1M4 LINE L1 3942 4371 -1775 * 2915 246 62 75 chr5 94805232 94805806 -108279726 + L1MC3 LINE L1 5919 6499 -1286 2013 123 3 10 chr5 94805806 94806107 -108279425 + AluSx SINE Alu 1 299 -13 2915 246 62 75 chr5 94806107 94806784 -108278748 + L1MC3 LINE L1 6499 7153 -632 971 235 12 24 chr5 94806794 94807045 -108278487 + L1ME2 LINE L1 5828 6075 -89 300 53 0 0 chr5 94807047 94807085 -108278447 + (TA)n Simple_repeat Simple_repeat 2 39 0 799 211 61 24 chr5 94807105 94807352 -108278180 - L1MD3 LINE L1 -878 7117 6862 275 127 16 0 chr5 94807430 94807493 -108278039 + (TA)n Simple_repeat Simple_repeat 1 64 0 22 70 0 0 chr5 94808283 94808326 -108277206 + AT_rich Low_complexity Low_complexity 1 43 0 1837 167 22 40 chr5 94809024 94809395 -108276137 + THE1B LTR MaLR 1 364 0 11005 106 5 9 chr5 94809395 94810982 -108274550 + THE1B-int LTR MaLR 1 1580 0 1794 161 33 42 chr5 94810991 94811352 -108274180 + THE1B LTR MaLR 1 358 -6 1232 204 31 97 chr5 94811352 94811744 -108273788 + MLT1B LTR MaLR 22 387 -3 643 213 59 96 chr5 94811868 94812286 -108273246 - MLT1D LTR MaLR -3 623 1 5672 224 47 10 chr5 94812522 94815111 -108270421 - L1MC1 LINE L1 -179 6154 3478 1812 143 0 41 chr5 94815200 94815494 -108270038 - AluSq SINE Alu -31 282 1 893 236 22 99 chr5 94815494 94815846 -108269686 - MER67C LTR ERV1 -245 269 4 706 186 50 0 chr5 94815846 94815986 -108269546 + FRAM SINE Alu 1 146 -30 489 76 0 0 chr5 94816049 94816115 -108269417 + (CA)n Simple_repeat Simple_repeat 1 66 0 29 0 0 0 chr5 94816185 94816214 -108269318 + AT_rich Low_complexity Low_complexity 1 29 0 1248 243 10 14 chr5 94817184 94817480 -108268052 - AluJo SINE Alu -7 295 1 2507 182 22 0 chr5 94820499 94820961 -108264571 + MER101 LTR ERV1 1 472 -2 22 35 0 0 chr5 94822003 94822032 -108263500 + AT_rich Low_complexity Low_complexity 1 29 0 1871 160 128 8 chr5 94822825 94823207 -108262325 + MSTA LTR MaLR 1 428 0 331 247 11 0 chr5 94823861 94823950 -108261582 + L1MC4 LINE L1 6614 6703 -1339 192 77 0 0 chr5 94823950 94823976 -108261556 + (TA)n Simple_repeat Simple_repeat 2 27 0 613 215 7 7 chr5 94825807 94825942 -108259590 + MER67C LTR ERV1 269 403 -307 308 206 0 0 chr5 94826099 94826167 -108259365 + MER67A LTR ERV1 476 543 0 214 175 0 0 chr5 94827909 94827949 -108257583 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 27 29 0 0 chr5 94829210 94829244 -108256288 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 94829252 94829274 -108256258 + AT_rich Low_complexity Low_complexity 1 22 0 193 326 63 21 chr5 94829280 94829375 -108256157 - L2 LINE L2 -16 3297 3199 22 0 0 0 chr5 94830017 94830039 -108255493 + AT_rich Low_complexity Low_complexity 1 22 0 27 81 0 0 chr5 94830898 94830960 -108254572 + AT_rich Low_complexity Low_complexity 1 62 0 1910 111 7 4 chr5 94831680 94831951 -108253581 - AluSp SINE Alu -41 272 1 26 0 0 0 chr5 94833385 94833411 -108252121 + AT_rich Low_complexity Low_complexity 1 26 0 412 176 0 0 chr5 94833623 94833691 -108251841 + MSTD LTR MaLR 43 110 -286 574 224 9 0 chr5 94833698 94833805 -108251727 + MSTD LTR MaLR 230 337 -59 770 251 0 11 chr5 94834500 94834675 -108250857 - MLT1F1 LTR MaLR 0 567 395 397 258 67 72 chr5 94834753 94834947 -108250585 - MLT1F1 LTR MaLR -343 211 7 279 0 0 0 chr5 94835024 94835055 -108250477 + (TG)n Simple_repeat Simple_repeat 2 32 0 2161 89 26 3 chr5 94835082 94835384 -108250148 + AluY SINE Alu 1 309 -2 668 242 0 0 chr5 94835756 94835876 -108249656 + FLAM_C SINE Alu 1 120 -23 243 146 0 0 chr5 94835879 94835920 -108249612 + (T)n Simple_repeat Simple_repeat 1 41 0 758 201 0 34 chr5 94835920 94836030 -108249502 + FRAM SINE Alu 1 101 -211 2508 148 13 0 chr5 94836030 94836428 -108249104 - MER57A LTR ERV1 0 403 1 758 201 0 34 chr5 94836428 94836466 -108249066 + FRAM SINE Alu 101 139 -37 294 50 0 0 chr5 94836466 94836506 -108249026 + (TC)n Simple_repeat Simple_repeat 2 41 0 27 0 0 0 chr5 94836506 94836533 -108248999 + AT_rich Low_complexity Low_complexity 1 27 0 36 77 0 0 chr5 94836616 94836694 -108248838 + AT_rich Low_complexity Low_complexity 1 78 0 230 297 94 55 chr5 94836924 94837052 -108248480 - MIR3 SINE MIR -1 207 75 2068 118 0 0 chr5 94838956 94839262 -108246270 + AluSc SINE Alu 1 306 -3 294 269 128 51 chr5 94839405 94839561 -108245971 + MER63A DNA MER1_type 43 210 0 338 197 8 94 chr5 94840057 94840174 -108245358 + L1MDa LINE L1 1508 1614 -4926 1874 286 60 41 chr5 94840284 94842035 -108243497 + L1MDa LINE L1 1250 3073 -3467 268 207 12 12 chr5 94842205 94842287 -108243245 + (TA)n Simple_repeat Simple_repeat 2 83 0 631 341 20 12 chr5 94842291 94842543 -108242989 + LTR16C LTR ERVL 13 266 -225 25 0 0 0 chr5 94842765 94842790 -108242742 + AT_rich Low_complexity Low_complexity 1 25 0 1857 100 0 8 chr5 94842967 94843216 -108242316 - AluSg SINE Alu -16 294 48 181 222 86 74 chr5 94843752 94843833 -108241699 + L3 LINE CR1 923 1004 -573 * 187 261 92 15 chr5 94843812 94843877 -108241655 - MIR SINE MIR -173 89 20 276 303 25 82 chr5 94844012 94844134 -108241398 - MIR SINE MIR -122 140 26 26 0 0 0 chr5 94844214 94844240 -108241292 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr5 94845350 94845377 -108240155 + (A)n Simple_repeat Simple_repeat 1 27 0 26 50 0 0 chr5 94846140 94846180 -108239352 + AT_rich Low_complexity Low_complexity 1 40 0 4293 112 26 7 chr5 94846302 94846989 -108238543 + L1PA12 LINE L1 5469 6168 0 24 0 0 0 chr5 94847332 94847356 -108238176 + AT_rich Low_complexity Low_complexity 1 24 0 6497 46 1 2 chr5 94847377 94848179 -108237353 - L1PA5 LINE L1 -1 6153 5353 2350 31 0 0 chr5 94848179 94848469 -108237063 + L1PA5 LINE L1 5055 5344 -802 273 148 0 37 chr5 94848469 94848523 -108237009 + MIR SINE MIR 81 132 -130 3006 93 20 11 chr5 94848655 94848696 -108236836 - MLT2A1 LTR ERVL 0 444 405 261 0 0 0 chr5 94848696 94848725 -108236807 + (TG)n Simple_repeat Simple_repeat 2 30 0 3006 93 20 11 chr5 94848725 94849123 -108236409 - MLT2A1 LTR ERVL -39 405 1 697 204 28 0 chr5 94849269 94849411 -108236121 + LTR40a LTR ERVL 374 519 0 944 254 28 94 chr5 94849412 94850092 -108235440 + HERVL40 LTR ERVL 1 722 -4808 704 270 92 0 chr5 94850093 94850289 -108235243 - MER58A DNA MER1_type 0 224 11 286 242 15 0 chr5 94850573 94850639 -108234893 + HERVL40 LTR ERVL 1021 1087 -4443 1131 38 0 0 chr5 94850827 94850958 -108234574 - AluY SINE Alu -180 131 1 551 270 36 109 chr5 94851015 94851160 -108234372 - L1MEd LINE L1 -5735 384 230 2025 82 46 36 chr5 94851160 94851466 -108234066 + AluSc SINE Alu 1 309 0 551 270 36 109 chr5 94851466 94851713 -108233819 - L1MEd LINE L1 -5889 230 21 368 331 91 11 chr5 94852821 94852996 -108232536 - ERVL LTR ERVL -2367 3397 3209 342 318 57 6 chr5 94853150 94853326 -108232206 - ERVL LTR ERVL -2683 2971 2787 459 274 40 84 chr5 94853883 94854230 -108231302 + L1MDb LINE L1 748 1079 -5330 1748 219 126 82 chr5 94854230 94855069 -108230463 - LTR28 LTR ERV1 0 1020 1 630 241 55 35 chr5 94855069 94855326 -108230206 + L1MDb LINE L1 1078 1339 -5057 1092 261 35 65 chr5 94855334 94855736 -108229796 - LTR40b LTR ERVL -59 403 14 21 57 0 0 chr5 94857519 94857554 -108227978 + AT_rich Low_complexity Low_complexity 1 35 0 365 323 31 26 chr5 94857998 94858190 -108227342 - LTR16C LTR ERVL -36 455 263 28 71 0 0 chr5 94858857 94858913 -108226619 + AT_rich Low_complexity Low_complexity 1 56 0 460 325 62 66 chr5 94858991 94859428 -108226104 - MLT1J LTR MaLR -53 458 24 214 340 85 25 chr5 94861180 94861415 -108224117 + L2 LINE L2 1752 2000 -1314 278 369 21 14 chr5 94861565 94861706 -108223826 + L2 LINE L2 2158 2299 -1015 1929 271 34 27 chr5 94861721 94862418 -108223114 + L1ME1 LINE L1 5442 6143 -23 1578 194 42 17 chr5 94862592 94862948 -108222584 - MLT1A1 LTR MaLR 0 365 1 329 303 10 0 chr5 94863880 94863979 -108221553 + MLT1K LTR MaLR 365 464 -124 2392 60 3 0 chr5 94864971 94865273 -108220259 + AluY SINE Alu 1 303 -8 323 296 86 18 chr5 94866333 94866553 -108218979 + L1MC4a LINE L1 4860 5094 -1052 3917 142 23 22 chr5 94866815 94867541 -108217991 - Tigger3b DNA MER2_type -1 1230 504 2318 153 39 61 chr5 94867694 94868185 -108217347 - Tigger3b DNA MER2_type -751 480 1 22 0 0 0 chr5 94868185 94868207 -108217325 + AT_rich Low_complexity Low_complexity 1 22 0 390 323 118 26 chr5 94868211 94868709 -108216823 + L1MC4a LINE L1 5373 5916 -1892 1262 153 0 15 chr5 94868721 94868956 -108216576 - AluJb SINE Alu 0 317 86 1779 124 44 22 chr5 94869137 94869412 -108216120 + AluSx SINE Alu 21 301 -11 35 54 0 0 chr5 94869470 94869526 -108216006 + AT_rich Low_complexity Low_complexity 1 56 0 27 49 0 0 chr5 94869871 94869912 -108215620 + AT_rich Low_complexity Low_complexity 1 41 0 2133 131 54 20 chr5 94870051 94870402 -108215130 + THE1B LTR MaLR 1 363 -1 495 319 99 5 chr5 94870462 94870675 -108214857 - MIR SINE MIR -24 238 6 26 30 0 0 chr5 94871278 94871311 -108214221 + AT_rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr5 94871902 94871945 -108213587 + AT_rich Low_complexity Low_complexity 1 43 0 1558 222 35 35 chr5 94871946 94872320 -108213212 - MLT1A2 LTR MaLR 0 374 1 637 161 9 142 chr5 94873897 94874115 -108211417 - MER53 DNA DNA 0 189 1 198 0 0 0 chr5 94875102 94875124 -108210408 + (T)n Simple_repeat Simple_repeat 1 22 0 428 244 167 6 chr5 94875659 94875815 -108209717 + MIR SINE MIR 79 259 -3 2760 161 9 4 chr5 94876407 94876860 -108208672 + MER66B LTR ERV1 27 481 -5 215 161 107 0 chr5 94876875 94876931 -108208601 + MIR SINE MIR 119 180 -82 1599 131 33 18 chr5 94876964 94877239 -108208293 + L1PB4 LINE L1 5876 6154 -2 1886 267 49 50 chr5 94877454 94878331 -108207201 - L1M4 LINE L1 -1954 4192 3317 438 283 121 69 chr5 94878373 94878793 -108206739 + L1M4 LINE L1 2928 3369 -2777 304 265 130 5 chr5 94878793 94878978 -108206554 + L1M4 LINE L1 2756 2963 -3183 * 1917 85 19 3 chr5 94878974 94879281 -108206251 - L1P LINE L1 -2849 3297 2986 6172 55 27 9 chr5 94879281 94880093 -108205439 + L1PA7 LINE L1 5326 6154 0 180 0 0 0 chr5 94881207 94881227 -108204305 + (GA)n Simple_repeat Simple_repeat 1 20 0 26 74 0 0 chr5 94881629 94881683 -108203849 + AT_rich Low_complexity Low_complexity 1 54 0 366 274 0 69 chr5 94882180 94882282 -108203250 + MIR SINE MIR 5 99 -163 5529 97 2 5 chr5 94882371 94883172 -108202360 + L1PB1 LINE L1 5286 6084 -67 349 351 35 6 chr5 94883526 94883697 -108201835 - LTR16A LTR ERVL -179 271 96 447 237 8 34 chr5 94883919 94884037 -108201495 - MLT1C LTR MaLR -352 115 1 241 195 39 52 chr5 94884041 94884118 -108201414 - L1MCc LINE L1 -6100 323 248 531 103 0 86 chr5 94884121 94884237 -108201295 - MLT2A1 LTR ERVL 0 444 339 4417 119 63 70 chr5 94884618 94885494 -108200038 + MER4D LTR ERV1 1 870 -2 21 43 0 22 chr5 94886108 94886134 -108199398 + AT_rich Low_complexity Low_complexity 1 27 -18 1975 144 0 0 chr5 94886134 94886426 -108199106 + AluJb SINE Alu 3 294 -18 21 43 0 22 chr5 94886426 94886445 -108199087 + AT_rich Low_complexity Low_complexity 27 45 0 22 35 0 0 chr5 94886470 94886499 -108199033 + AT_rich Low_complexity Low_complexity 1 29 0 477 90 0 0 chr5 94886984 94887051 -108198481 + (TG)n Simple_repeat Simple_repeat 1 67 0 1073 115 0 0 chr5 94887408 94887564 -108197968 + AluSg/x SINE Alu 156 311 -1 465 349 10 10 chr5 94887593 94887785 -108197747 - MIR SINE MIR 0 262 71 413 115 128 0 chr5 94887975 94888053 -108197479 - AluSg/x SINE Alu -6 303 216 253 176 11 44 chr5 94888330 94888461 -108197071 + (TA)n Simple_repeat Simple_repeat 1 126 0 321 82 0 0 chr5 94889098 94889147 -108196385 + (TG)n Simple_repeat Simple_repeat 2 50 0 221 376 161 17 chr5 94889359 94889763 -108195769 - L2 LINE L2 -457 2857 2396 2332 80 10 10 chr5 94890295 94890606 -108194926 + AluSp SINE Alu 1 311 -2 181 111 0 0 chr5 94891209 94891236 -108194296 + L2 LINE L2 3268 3294 -19 291 362 17 17 chr5 94891667 94891783 -108193749 + L2 LINE L2 3134 3249 -23 320 307 66 7 chr5 94892172 94892309 -108193223 + HAL1b LINE L1 432 576 -772 23 54 0 0 chr5 94892437 94892474 -108193058 + AT_rich Low_complexity Low_complexity 1 37 0 472 207 14 76 chr5 94892780 94892925 -108192607 + MLT2C1 LTR ERVL 260 395 -2 957 189 0 0 chr5 94893000 94893159 -108192373 - FRAM SINE Alu -6 160 2 214 246 0 0 chr5 94894100 94894157 -108191375 + (CA)n Simple_repeat Simple_repeat 2 58 0 1695 150 13 41 chr5 94894779 94894948 -108190584 - AluJo SINE Alu -5 307 150 2146 124 7 0 chr5 94894948 94895255 -108190277 - AluSx SINE Alu -3 309 1 1695 150 13 41 chr5 94895255 94895399 -108190133 - AluJo SINE Alu -162 150 3 21 0 0 0 chr5 94895431 94895452 -108190080 + AT_rich Low_complexity Low_complexity 1 21 0 230 86 29 0 chr5 94895462 94895497 -108190035 - MLT2C1 LTR ERVL 0 397 362 1153 196 55 110 chr5 94895557 94895732 -108189800 - MLT2C1 LTR ERVL -54 343 197 2044 74 0 60 chr5 94895732 94896031 -108189501 - AluY SINE Alu -30 281 1 1153 196 55 110 chr5 94896031 94896218 -108189314 - MLT2C1 LTR ERVL -200 197 1 218 278 146 44 chr5 94899151 94899356 -108186176 - L2 LINE L2 -100 3213 2988 2020 189 57 11 chr5 94899604 94900043 -108185489 - MER65C LTR ERV1 -2 459 1 29 28 0 0 chr5 94900047 94900083 -108185449 + AT_rich Low_complexity Low_complexity 1 36 0 1283 185 140 50 chr5 94900086 94900443 -108185089 - MLT1B LTR MaLR 0 390 2 1999 124 0 0 chr5 94901077 94901352 -108184180 + AluSg SINE Alu 35 309 -1 228 111 0 0 chr5 94901523 94901559 -108183973 + (CATTT)n Simple_repeat Simple_repeat 5 40 0 1423 176 0 4 chr5 94901667 94901905 -108183627 - AluJo SINE Alu -62 250 14 1958 149 3 16 chr5 94902689 94903005 -108182527 - AluSx SINE Alu 0 312 1 1589 205 11 6 chr5 94903842 94904254 -108181278 - MER65C LTR ERV1 0 461 1 23 0 0 0 chr5 94904367 94904390 -108181142 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr5 94904717 94904748 -108180784 + AT_rich Low_complexity Low_complexity 1 31 0 220 310 0 58 chr5 94905619 94905706 -108179826 - L2 LINE L2 0 3313 3232 650 308 99 37 chr5 94906254 94906741 -108178791 + LTR33 LTR ERVL 1 517 -4 230 0 33 0 chr5 94907331 94907361 -108178171 + (TA)n Simple_repeat Simple_repeat 2 32 0 2092 92 0 33 chr5 94907364 94907670 -108177862 - AluSg SINE Alu -14 296 1 1283 238 145 27 chr5 94908093 94908576 -108176956 - MLT1F LTR MaLR 0 542 3 21 36 0 0 chr5 94909336 94909364 -108176168 + AT_rich Low_complexity Low_complexity 1 28 0 242 329 49 61 chr5 94909565 94909729 -108175803 - L2 LINE L2 -759 2555 2394 23 0 0 0 chr5 94909793 94909816 -108175716 + AT_rich Low_complexity Low_complexity 1 23 0 1453 211 3 14 chr5 94909902 94910191 -108175341 + AluJb SINE Alu 1 286 -26 248 0 31 0 chr5 94910196 94910228 -108175304 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1348 197 52 22 chr5 94910632 94910901 -108174631 + AluJo SINE Alu 1 277 -35 478 278 152 0 chr5 94911509 94911660 -108173872 - LTR16A1 LTR ERVL 0 457 284 198 150 0 0 chr5 94911713 94911753 -108173779 + (T)n Simple_repeat Simple_repeat 1 40 0 193 304 184 30 chr5 94911878 94912079 -108173453 + L2 LINE L2 2470 2701 -613 22 0 0 0 chr5 94912099 94912121 -108173411 + AT_rich Low_complexity Low_complexity 1 22 0 245 246 31 15 chr5 94912367 94912432 -108173100 + MIR SINE MIR 83 148 -114 563 248 62 71 chr5 94912870 94913080 -108172452 - MER63A DNA MER1_type -1 209 2 3175 98 2 5 chr5 94914538 94914985 -108170547 - L1PA11 LINE L1 0 6174 5729 5024 136 1 3 chr5 94914996 94915776 -108169756 + L1P LINE L1 3608 4386 -1760 6746 23 2 0 chr5 94915777 94916564 -108168968 - L1PA3 LINE L1 0 6155 5367 4634 27 7 0 chr5 94916563 94917124 -108168408 + L1P LINE L1 4267 4831 -1315 * 2021 71 32 0 chr5 94918322 94918574 -108166958 + AluY SINE Alu 40 299 -12 1775 140 43 0 chr5 94920538 94920817 -108164715 + AluSx SINE Alu 1 291 -21 1428 208 73 0 chr5 94921079 94921367 -108164165 + AluSx SINE Alu 1 309 -3 272 49 49 0 chr5 94921372 94921413 -108164119 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 2413 70 3 6 chr5 94921460 94921772 -108163760 - AluY SINE Alu 0 311 1 2455 58 10 7 chr5 94921777 94922087 -108163445 - AluY SINE Alu 0 311 1 23 33 0 0 chr5 94922333 94922363 -108163169 + AT_rich Low_complexity Low_complexity 1 30 0 2178 262 72 38 chr5 94922413 94924140 -108161392 + L1MEc LINE L1 37 2209 -4187 1712 131 118 3 chr5 94924108 94924422 -108161110 + L1MA4A LINE L1 6019 6368 -4 * 354 287 156 18 chr5 94924474 94924641 -108160891 + MIR SINE MIR 72 261 -1 3611 182 39 45 chr5 94924641 94925420 -108160112 + LTR1 LTR ERV1 1 774 -11 677 276 76 53 chr5 94925594 94925935 -108159597 - L2 LINE L2 -83 3230 2882 473 252 27 0 chr5 94926722 94926833 -108158699 - L2 LINE L2 0 3313 3200 5179 219 104 25 chr5 94976833 94978091 -108107441 - L1PA13 LINE L1 -5429 1358 2 245 423 22 22 chr5 94978622 94978759 -108106773 + L2 LINE L2 3099 3235 -37 185 329 0 55 chr5 94979942 94980015 -108105517 - L2 LINE L2 -18 3254 3186 199 381 62 11 chr5 94980190 94980366 -108105166 - L2 LINE L2 -414 2900 2716 620 323 58 0 chr5 94980661 94980887 -108104645 + MIR SINE MIR 14 252 -10 216 0 0 0 chr5 94981683 94981707 -108103825 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1228 238 67 3 chr5 94982273 94982601 -108102931 - L1MC/D LINE L1 -1963 5822 5474 1012 187 5 0 chr5 94983146 94983355 -108102177 - L1MA7 LINE L1 0 6291 6082 341 235 10 10 chr5 94983356 94983458 -108102074 + MER95 LTR ERV 330 431 0 1379 205 44 3 chr5 94983827 94984002 -108101530 - AluJo SINE Alu -7 305 112 234 0 0 0 chr5 94984002 94984028 -108101504 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1379 205 44 3 chr5 94984028 94984145 -108101387 - AluJo SINE Alu -200 112 1 340 313 49 43 chr5 94984149 94984686 -108100846 - L1MEd LINE L1 -4760 1550 971 29 0 0 0 chr5 94984712 94984741 -108100791 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 94985113 94985149 -108100383 + AT_rich Low_complexity Low_complexity 1 36 0 913 197 22 0 chr5 94985399 94985582 -108099950 + L1P LINE L1 1608 1794 -4352 5105 207 39 2 chr5 94985617 94987327 -108098205 - L1P4 LINE L1 -501 6313 4490 1763 174 84 21 chr5 94987324 94987868 -108097664 - L1P4 LINE L1 -4352 2445 1835 * 27 62 0 0 chr5 94989262 94989310 -108096222 + AT_rich Low_complexity Low_complexity 1 48 0 608 283 98 18 chr5 94989712 94989988 -108095544 + LTR41 LTR ERVL 1 298 -475 486 195 16 124 chr5 94990436 94990621 -108094911 + LTR41 LTR ERVL 599 763 -10 247 342 0 0 chr5 94991186 94991265 -108094267 + L2 LINE L2 3186 3264 -8 493 347 45 29 chr5 94992007 94992249 -108093283 + MIR SINE MIR 11 256 -6 369 345 23 23 chr5 94992405 94992582 -108092950 - MER5B DNA MER1_type -1 177 1 30 0 0 0 chr5 94993865 94993895 -108091637 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 94994347 94994368 -108091164 + AT_rich Low_complexity Low_complexity 1 21 0 533 42 96 24 chr5 94994541 94994708 -108090824 + (TA)n Simple_repeat Simple_repeat 1 179 0 46 19 0 0 chr5 94994708 94994761 -108090771 + AT_rich Low_complexity Low_complexity 1 53 0 213 363 53 35 chr5 94995082 94995195 -108090337 - L2 LINE L2 0 3313 3199 895 154 19 19 chr5 94995250 94995412 -108090120 + AluJb SINE Alu 132 293 -19 1095 155 52 41 chr5 94996268 94996462 -108089070 - THE1B LTR MaLR -71 293 98 2638 197 15 52 chr5 94996463 94997114 -108088418 - L1 LINE L1 -1647 4499 3873 647 133 19 0 chr5 94997116 94997221 -108088311 + THE1B LTR MaLR 1 107 -257 226 302 81 12 chr5 94998217 94998303 -108087229 + MIR SINE MIR 1 92 -170 304 262 126 19 chr5 94999477 94999580 -108085952 + MLT1I LTR MaLR 118 231 -178 * 1949 165 0 21 chr5 94999576 94999909 -108085623 + MER1B DNA MER1_type 14 339 0 249 316 59 22 chr5 94999919 95000055 -108085477 + MLT1I LTR MaLR 251 391 -18 2035 28 16 0 chr5 95000451 95000705 -108084827 - L1PA4 LINE L1 -122 6033 5776 3048 37 5 47 chr5 95000705 95001114 -108084418 + L1PA4 LINE L1 5380 5771 -384 1084 208 19 5 chr5 95001114 95001326 -108084206 + MLT2D LTR ERVL 83 297 -117 291 28 0 0 chr5 95001432 95001468 -108084064 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr5 95001584 95001607 -108083925 + (TA)n Simple_repeat Simple_repeat 1 23 0 4788 174 30 7 chr5 95001613 95002958 -108082574 - L1P4 LINE L1 -485 5681 4304 1314 65 0 0 chr5 95002975 95003143 -108082389 - L1PA5 LINE L1 -8 6146 5979 320 0 0 0 chr5 95003143 95003179 -108082353 + tRNA-Gly-GGC tRNA tRNA 2 37 -37 341 258 132 6 chr5 95003833 95004015 -108081517 - L1MEc LINE L1 -4926 1470 1266 1743 148 78 33 chr5 95004330 95004689 -108080843 + THE1C LTR MaLR 1 375 0 231 345 9 36 chr5 95004940 95005050 -108080482 - LTR16B LTR ERVL -332 132 26 225 197 14 56 chr5 95005116 95005187 -108080345 + T-rich Low_complexity Low_complexity 4 71 0 226 163 0 61 chr5 95005226 95005275 -108080257 + T-rich Low_complexity Low_complexity 2 47 0 333 172 0 0 chr5 95006414 95006472 -108079060 + MER57A LTR ERV1 3 60 -343 24 67 0 0 chr5 95006596 95006641 -108078891 + AT_rich Low_complexity Low_complexity 1 45 0 436 280 14 14 chr5 95006756 95006899 -108078633 - MIR SINE MIR -30 232 90 189 0 0 0 chr5 95007407 95007428 -108078104 + (CA)n Simple_repeat Simple_repeat 2 22 0 206 294 15 44 chr5 95007493 95007561 -108077971 - L2 LINE L2 0 3313 3248 23 54 0 0 chr5 95007706 95007743 -108077789 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 95007841 95007877 -108077655 + AT_rich Low_complexity Low_complexity 1 36 0 1505 223 35 55 chr5 95008670 95009069 -108076463 + MSTD LTR MaLR 4 394 -2 27 29 0 0 chr5 95009296 95009330 -108076202 + AT_rich Low_complexity Low_complexity 1 34 0 1048 176 131 28 chr5 95009419 95009779 -108075753 - MSTC LTR MaLR 0 428 1 553 204 221 17 chr5 95009785 95009966 -108075566 - MSTC-int LTR MaLR -6 1729 1512 1059 158 69 5 chr5 95009974 95010177 -108075355 - Tigger1 DNA MER2_type -1 2417 2202 885 185 0 6 chr5 95010166 95010323 -108075209 - Tigger1 DNA MER2_type -2261 157 2 * 5164 249 40 49 chr5 95010324 95011843 -108073689 - MSTC-int LTR MaLR -229 1506 2 1338 177 182 35 chr5 95011845 95012218 -108073314 - MSTC LTR MaLR 0 428 1 580 214 77 139 chr5 95012304 95012735 -108072797 - MLT1J LTR MaLR -105 406 3 289 295 0 13 chr5 95012760 95012838 -108072694 + CT-rich Low_complexity Low_complexity 2 78 0 22 0 0 0 chr5 95013021 95013043 -108072489 + AT_rich Low_complexity Low_complexity 1 22 0 1955 126 44 0 chr5 95014148 95014441 -108071091 + AluSx SINE Alu 1 306 -6 23 78 0 0 chr5 95014631 95014682 -108070850 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 95014994 95015015 -108070517 + AT_rich Low_complexity Low_complexity 1 21 0 255 333 54 108 chr5 95015390 95015630 -108069902 + L2 LINE L2 3019 3245 -27 1783 284 56 18 chr5 95016258 95016825 -108068707 - MER77 LTR ERV1 -9 596 53 381 331 71 16 chr5 95017227 95017776 -108067756 + L1ME3A LINE L1 4734 5312 -834 2889 159 35 2 chr5 95017776 95018323 -108067209 + L1MA4 LINE L1 5736 6300 0 599 315 77 7 chr5 95018398 95018696 -108066836 + L1ME3A LINE L1 5353 5671 -499 235 304 125 0 chr5 95018814 95018926 -108066606 + L1ME3A LINE L1 5995 6120 -50 32 26 0 0 chr5 95018936 95018975 -108066557 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 95019017 95019047 -108066485 + AT_rich Low_complexity Low_complexity 1 30 0 309 59 3 0 chr5 95019086 95019131 -108066401 - MLT2B2 LTR ERVL -8 507 411 2025 164 22 68 chr5 95019166 95019443 -108066089 - Tigger2a DNA MER2_type -2275 433 182 5272 55 53 0 chr5 95019443 95020128 -108065404 + L1PA5 LINE L1 5434 6154 0 2025 164 22 68 chr5 95020128 95020294 -108065238 - Tigger2a DNA MER2_type -2526 182 10 1477 217 0 10 chr5 95020811 95021106 -108064426 + AluJb SINE Alu 1 292 -20 252 0 0 0 chr5 95021199 95021227 -108064305 + (TC)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr5 95021226 95021254 -108064278 + (CA)n Simple_repeat Simple_repeat 1 28 0 23 54 0 0 chr5 95021266 95021303 -108064229 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 95021842 95021863 -108063669 + AT_rich Low_complexity Low_complexity 1 21 0 229 291 134 52 chr5 95022027 95022199 -108063333 + MIR SINE MIR 64 249 -13 249 91 36 18 chr5 95023298 95023353 -108062179 + (TAA)n Simple_repeat Simple_repeat 2 57 0 226 261 92 0 chr5 95023381 95023446 -108062086 + MIR SINE MIR 92 162 -100 224 250 25 50 chr5 95023870 95023950 -108061582 - L2 LINE L2 -5 3308 3231 21 0 0 0 chr5 95023960 95023981 -108061551 + AT_rich Low_complexity Low_complexity 1 21 0 384 362 117 25 chr5 95024887 95025169 -108060363 + HAL1 LINE L1 239 546 -1961 546 90 0 13 chr5 95025172 95025250 -108060282 + MADE1 DNA Mariner 4 80 0 1832 300 124 26 chr5 95025274 95026454 -108059078 + HAL1 LINE L1 628 1922 -585 276 279 91 7 chr5 95026520 95026674 -108058858 + HAL1 LINE L1 2055 2221 -286 207 0 0 0 chr5 95026773 95026796 -108058736 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 210 37 0 0 chr5 95026795 95026822 -108058710 + (CA)n Simple_repeat Simple_repeat 1 27 0 1251 230 12 0 chr5 95026918 95027170 -108058362 - MLT1D LTR MaLR 0 505 251 216 0 0 0 chr5 95027337 95027361 -108058171 + (A)n Simple_repeat Simple_repeat 1 24 0 1203 226 39 116 chr5 95028025 95028073 -108057459 - MLT2B1 LTR ERVL 0 520 470 598 25 25 0 chr5 95028073 95028153 -108057379 + (TAGA)n Simple_repeat Simple_repeat 3 84 0 1203 226 39 116 chr5 95028153 95028667 -108056865 - MLT2B1 LTR ERVL -50 470 1 22 0 0 0 chr5 95028829 95028851 -108056681 + AT_rich Low_complexity Low_complexity 1 22 0 358 226 0 87 chr5 95029029 95029144 -108056388 - MLT1D LTR MaLR -341 164 60 * 563 235 7 47 chr5 95029136 95029285 -108056247 - MLT1E2 LTR MaLR -482 144 2 508 251 111 34 chr5 95029495 95029730 -108055802 + HAL1 LINE L1 2255 2507 0 261 0 0 0 chr5 95029974 95030003 -108055529 + (TA)n Simple_repeat Simple_repeat 1 29 0 908 196 51 28 chr5 95031193 95031407 -108054125 + MER20 DNA MER1_type 1 219 0 215 294 24 95 chr5 95031982 95032036 -108053496 + L2 LINE L2 3156 3212 -60 2266 102 0 0 chr5 95032036 95032339 -108053193 + AluSq SINE Alu 1 303 -10 215 294 24 95 chr5 95032339 95032410 -108053122 + L2 LINE L2 3212 3272 0 670 175 7 13 chr5 95032653 95032807 -108052725 + GA-rich Low_complexity Low_complexity 4 156 0 1830 261 176 72 chr5 95032967 95034180 -108051352 + Charlie2b DNA MER1_type 78 1416 -1366 490 218 73 0 chr5 95034935 95035059 -108050473 + MER8 DNA MER2_type 45 177 -62 289 225 0 50 chr5 95035089 95035169 -108050363 - Tigger2a DNA MER2_type -358 76 1 339 191 0 0 chr5 95035398 95035466 -108050066 + (TATG)n Simple_repeat Simple_repeat 2 69 0 5075 39 16 0 chr5 95035469 95036090 -108049442 - L1PA7 LINE L1 -17 6137 5507 256 194 229 97 chr5 95037918 95038093 -108047439 + MIR SINE MIR 63 260 -2 2061 81 0 52 chr5 95038198 95038506 -108047026 - AluY SINE Alu -6 305 14 253 188 29 0 chr5 95038878 95038947 -108046585 + (TA)n Simple_repeat Simple_repeat 1 71 0 23 0 0 0 chr5 95039002 95039025 -108046507 + AT_rich Low_complexity Low_complexity 1 23 0 1361 158 8 11 chr5 95039549 95039814 -108045718 - L1MB7 LINE L1 -19 6165 5902 225 395 30 52 chr5 95039963 95040097 -108045435 + MER5A DNA MER1_type 38 179 -10 270 0 0 0 chr5 95040210 95040240 -108045292 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 30 45 0 0 chr5 95040343 95040387 -108045145 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 95040579 95040602 -108044930 + AT_rich Low_complexity Low_complexity 1 23 0 476 47 109 36 chr5 95043365 95043700 -108041832 + (CTATA)n Simple_repeat Simple_repeat 1 359 0 303 238 6 49 chr5 95043704 95043868 -108041664 + (TA)n Simple_repeat Simple_repeat 1 157 0 378 362 41 15 chr5 95043921 95044117 -108041415 - L2 LINE L2 -941 2373 2173 26 30 0 0 chr5 95045694 95045727 -108039805 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 95045792 95045822 -108039710 + AT_rich Low_complexity Low_complexity 1 30 0 228 250 88 38 chr5 95046154 95046234 -108039298 + L2 LINE L2 3229 3312 -1 568 26 26 0 chr5 95047395 95047473 -108038059 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 340 277 31 69 chr5 95047839 95047929 -108037603 - L2 LINE L2 0 3313 3230 1989 138 0 10 chr5 95047929 95048227 -108037305 + AluSx SINE Alu 5 299 -13 340 277 31 69 chr5 95048227 95048295 -108037237 - L2 LINE L2 -83 3230 3161 253 372 189 0 chr5 95048667 95048858 -108036674 + MIR SINE MIR 2 228 -34 387 89 0 0 chr5 95049111 95049167 -108036365 + (TA)n Simple_repeat Simple_repeat 2 57 0 1215 164 19 10 chr5 95050191 95050398 -108035134 + AluJo SINE Alu 1 209 -103 1872 226 66 47 chr5 95050655 95051187 -108034345 - MLT2B3 LTR ERVL -12 542 1 192 40 0 0 chr5 95052624 95052649 -108032883 + (A)n Simple_repeat Simple_repeat 1 25 0 1564 171 7 46 chr5 95053413 95053718 -108031814 + AluJo SINE Alu 5 297 -15 637 286 96 18 chr5 95054237 95054457 -108031075 - MIR SINE MIR 0 262 26 255 365 0 10 chr5 95054497 95054593 -108030939 - MIR SINE MIR -71 191 97 651 238 149 0 chr5 95054606 95054787 -108030745 - MER3 DNA MER1_type 0 209 2 10910 37 0 1 chr5 95055575 95056913 -108028619 - L1PA3 LINE L1 -1643 4503 3168 7771 18 0 0 chr5 95056913 95058565 -108026967 + L1PA3 LINE L1 4504 6155 0 647 204 102 0 chr5 95059047 95059237 -108026295 + L1MA9 LINE L1 5958 6176 -136 262 157 71 0 chr5 95059245 95059315 -108026217 + L1MA9 LINE L1 6228 6302 -10 549 210 185 58 chr5 95061502 95061707 -108023825 - MIR SINE MIR -27 235 5 249 195 46 69 chr5 95062093 95062180 -108023352 - MLT1E1 LTR MaLR 0 624 540 1322 195 33 66 chr5 95062183 95062586 -108022946 - MLT2B3 LTR ERVL 0 554 167 804 227 128 91 chr5 95062688 95063071 -108022461 - MLT1E1 LTR MaLR -204 450 54 33 43 0 0 chr5 95063121 95063168 -108022364 + AT_rich Low_complexity Low_complexity 1 47 0 306 0 0 0 chr5 95063351 95063385 -108022147 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr5 95063683 95063720 -108021812 + AT_rich Low_complexity Low_complexity 1 37 0 497 306 42 7 chr5 95063750 95063894 -108021638 - MIR SINE MIR -111 151 3 595 309 82 60 chr5 95064534 95065033 -108020499 - LTR67 LTR ERVL -4 553 44 720 233 6 13 chr5 95065078 95065237 -108020295 + L1PB4 LINE L1 5999 6156 0 195 214 71 0 chr5 95065345 95065401 -108020131 + MIR SINE MIR 201 260 -2 380 164 82 0 chr5 95066757 95066830 -108018702 + L1PB4 LINE L1 6076 6154 -2 2306 114 29 0 chr5 95068154 95068496 -108017036 - Tigger1 DNA MER2_type -3 2415 2064 430 97 0 3 chr5 95068496 95068672 -108016860 + AluSg SINE Alu 1 230 -79 257 272 29 0 chr5 95070164 95070267 -108015265 + (TA)n Simple_repeat Simple_repeat 2 107 0 256 286 0 0 chr5 95071289 95071359 -108014173 + T-rich Low_complexity Low_complexity 1 70 0 234 394 53 0 chr5 95071364 95071496 -108014036 + L2 LINE L2 2384 2522 -792 236 304 99 14 chr5 95071727 95071893 -108013639 - MIR SINE MIR -59 203 25 1346 242 44 26 chr5 95072246 95072635 -108012897 + MSTD LTR MaLR 1 396 0 1063 267 98 38 chr5 95073130 95073557 -108011975 - MER77 LTR ERV1 -8 597 145 417 250 114 14 chr5 95073575 95073715 -108011817 - MER77 LTR ERV1 -396 209 56 1340 180 31 58 chr5 95074347 95074452 -108011080 + AluJo SINE Alu 19 125 -187 2087 85 0 44 chr5 95074452 95074747 -108010785 - AluSp SINE Alu -16 297 16 1340 180 31 58 chr5 95074747 95074935 -108010597 + AluJo SINE Alu 125 304 -8 21 0 0 0 chr5 95075418 95075439 -108010093 + AT_rich Low_complexity Low_complexity 1 21 0 2906 115 8 0 chr5 95075626 95076026 -108009506 + MLT2A1 LTR ERVL 1 403 -41 182 147 42 32 chr5 95076032 95076127 -108009405 + (TA)n Simple_repeat Simple_repeat 2 97 0 474 18 0 0 chr5 95076141 95076196 -108009336 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 280 30 0 0 chr5 95076196 95076229 -108009303 + MLT2A1 LTR ERVL 404 436 -8 36874 81 16 2 chr5 95076233 95081032 -108004500 + HERVL-A1 LTR ERVL 1 4865 -789 1862 200 29 31 chr5 95081033 95081483 -108004049 + LTR2 LTR ERV1 1 449 0 3496 238 45 42 chr5 95081483 95082867 -108002665 + HERVE LTR ERV1 1 1582 -6441 13924 186 27 25 chr5 95082868 95085544 -107999988 + HERVE LTR ERV1 2936 5617 -2196 3091 193 2 0 chr5 95085599 95086138 -107999394 + HERVE LTR ERV1 6356 6895 -1 1794 194 67 28 chr5 95086138 95086341 -107999191 + LTR2 LTR ERV1 1 195 -254 204 40 0 0 chr5 95086341 95086366 -107999166 + (TTCTG)n Simple_repeat Simple_repeat 1 25 0 1794 194 67 28 chr5 95086366 95086594 -107998938 + LTR2 LTR ERV1 195 449 0 1683 105 46 0 chr5 95086594 95086832 -107998700 + HERVL LTR ERVL 4863 5111 -543 1219 131 1 7 chr5 95086833 95087028 -107998504 - pTR5 LTR ERV1 -2046 392 66 364 204 31 20 chr5 95087028 95087126 -107998406 - LTR30 LTR ERV1 -80 642 544 4400 127 151 36 chr5 95087126 95088132 -107997400 - pTR5 LTR ERV1 -413 2025 743 4143 75 20 2 chr5 95088121 95088667 -107996865 + HERVL-A1 LTR ERVL 5098 5653 -1 * 3130 91 0 0 chr5 95088668 95089075 -107996457 + MLT2A1 LTR ERVL 1 407 -37 377 68 14 82 chr5 95089092 95089165 -107996367 + MLT2A1 LTR ERVL 377 444 0 735 143 143 0 chr5 95089271 95089418 -107996114 + L1MB3 LINE L1 6016 6183 0 24 32 0 0 chr5 95089694 95089725 -107995807 + AT_rich Low_complexity Low_complexity 1 31 0 425 278 165 10 chr5 95090011 95090205 -107995327 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr5 95091039 95091070 -107994462 + AT_rich Low_complexity Low_complexity 1 31 0 1852 135 0 31 chr5 95091406 95091695 -107993837 + AluSx SINE Alu 18 297 -15 526 295 62 68 chr5 95092936 95093261 -107992271 + LTR16A1 LTR ERVL 127 449 -8 360 0 0 0 chr5 95095113 95095153 -107990379 + (TG)n Simple_repeat Simple_repeat 2 41 0 202 122 20 20 chr5 95095245 95095294 -107990238 + (TA)n Simple_repeat Simple_repeat 1 49 0 204 40 0 0 chr5 95095420 95095445 -107990087 + (TA)n Simple_repeat Simple_repeat 1 25 0 2368 267 90 17 chr5 95096659 95097855 -107987677 - L1M4 LINE L1 -1166 4980 3697 189 240 40 0 chr5 95097969 95098019 -107987513 - L2 LINE L2 0 3272 3221 * 325 326 105 22 chr5 95097987 95098168 -107987364 - MIR SINE MIR -14 248 53 2264 112 12 79 chr5 95098173 95098576 -107986956 - MER51B LTR ERV1 -1 376 1 1939 155 17 0 chr5 95098709 95099005 -107986527 + AluSx SINE Alu 1 301 -11 1462 192 152 7 chr5 95099589 95100022 -107985510 - LTR54B LTR ERV1 -2 496 1 26 50 0 0 chr5 95100440 95100480 -107985052 + AT_rich Low_complexity Low_complexity 1 40 0 1662 153 56 47 chr5 95100673 95101012 -107984520 - MER2 DNA MER2_type -2 342 1 207 261 0 0 chr5 95101192 95101238 -107984294 + L2 LINE L2 3268 3313 0 330 313 112 0 chr5 95101983 95102117 -107983415 + MIR SINE MIR 8 156 -106 498 323 76 48 chr5 95102223 95102539 -107982993 + MLT1I LTR MaLR 72 396 -13 231 234 0 0 chr5 95102700 95102747 -107982785 + MIR SINE MIR 206 252 -10 26 0 0 0 chr5 95103284 95103310 -107982222 + AT_rich Low_complexity Low_complexity 1 26 0 428 330 82 68 chr5 95103695 95104119 -107981413 - L2 LINE L2 -4 3309 2880 202 329 87 39 chr5 95104147 95104354 -107981178 - L2 LINE L2 -635 2679 2463 217 280 53 0 chr5 95104421 95104496 -107981036 - MIR SINE MIR 0 262 184 442 295 67 0 chr5 95104513 95104662 -107980870 - MIR SINE MIR -47 215 57 2272 129 0 9 chr5 95104919 95105260 -107980272 + MER7A DNA MER2_type 10 345 -1 355 287 11 0 chr5 95105304 95105398 -107980134 + L1ME3A LINE L1 5982 6076 -94 24 53 0 0 chr5 95105491 95105529 -107980003 + AT_rich Low_complexity Low_complexity 1 38 0 242 242 0 0 chr5 95105660 95105722 -107979810 - L2 LINE L2 -1329 1985 1924 533 241 0 28 chr5 95106040 95106181 -107979351 + MLT1E LTR MaLR 455 591 -2 1089 202 12 57 chr5 95106357 95106604 -107978928 + MER8 DNA MER2_type 3 238 -1 213 121 0 0 chr5 95107810 95107843 -107977689 + (A)n Simple_repeat Simple_repeat 1 33 0 4288 153 13 21 chr5 95107903 95108020 -107977512 + L1PA16 LINE L1 5309 5425 -730 192 77 0 0 chr5 95108020 95108046 -107977486 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4288 153 13 21 chr5 95108046 95108757 -107976775 + L1PA16 LINE L1 5425 6155 0 225 364 20 20 chr5 95108942 95109041 -107976491 - LTR67 LTR ERVL -367 190 92 1604 26 10 0 chr5 95109330 95109524 -107976008 - L1PA3 LINE L1 -1 6154 5959 4921 219 43 123 chr5 95111625 95111981 -107973551 - L1MC/D LINE L1 -743 5797 5414 405 0 0 0 chr5 95111981 95112026 -107973506 + (TG)n Simple_repeat Simple_repeat 2 46 0 4921 219 43 123 chr5 95112026 95114904 -107970628 - L1MC/D LINE L1 -1126 5414 2915 3997 155 15 16 chr5 95115084 95115821 -107969711 - L1PB4 LINE L1 -2 6154 5419 324 111 4 0 chr5 95115780 95115833 -107969699 - L1P2 LINE L1 -695 5459 5405 2116 260 98 55 chr5 95115833 95116119 -107969413 - L1MC/D LINE L1 -4226 2314 2042 1810 176 0 3 chr5 95116119 95116409 -107969123 - AluJb SINE Alu -23 289 1 2116 260 98 55 chr5 95116409 95116692 -107968840 - L1MC/D LINE L1 -4498 2042 1773 192 40 0 0 chr5 95116692 95116717 -107968815 + (TG)n Simple_repeat Simple_repeat 1 25 0 2116 260 98 55 chr5 95116717 95117033 -107968499 - L1MC/D LINE L1 -4767 1773 1472 1708 198 8 46 chr5 95117033 95117422 -107968110 + MLT1A2 LTR MaLR 1 374 0 2116 260 98 55 chr5 95117422 95117749 -107967783 - L1MC/D LINE L1 -5068 1472 1048 787 176 0 0 chr5 95117777 95117908 -107967624 - FLAM_C SINE Alu -2 131 1 333 264 55 0 chr5 95119671 95119762 -107965770 + MLT1E2 LTR MaLR 3 98 -528 260 211 0 0 chr5 95119768 95119825 -107965707 + MLT1E2 LTR MaLR 568 624 -2 612 265 16 47 chr5 95119846 95120103 -107965429 + L1MC4a LINE L1 5638 5886 -1922 319 21 42 0 chr5 95120670 95120718 -107964814 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 206 158 0 26 chr5 95120826 95120864 -107964668 + GA-rich Low_complexity Low_complexity 2 38 0 343 340 57 60 chr5 95122474 95122869 -107962663 - L2 LINE L2 -219 3053 2657 27 29 0 0 chr5 95123961 95123995 -107961537 + AT_rich Low_complexity Low_complexity 1 34 0 1534 184 8 0 chr5 95124232 95124499 -107961033 - AluJo SINE Alu -14 298 30 2146 110 3 7 chr5 95124883 95125182 -107960350 + AluSq SINE Alu 1 298 -15 189 107 0 0 chr5 95125232 95125260 -107960272 + (A)n Simple_repeat Simple_repeat 1 28 0 700 65 0 0 chr5 95125521 95125613 -107959919 - L1PA10 LINE L1 -1 6167 6076 1311 96 0 0 chr5 95125614 95125792 -107959740 + L1PA10 LINE L1 5707 5884 -284 336 318 37 0 chr5 95125808 95125915 -107959617 - MIR SINE MIR -116 146 36 255 353 0 52 chr5 95125989 95126105 -107959427 - MIR SINE MIR -106 156 47 457 136 0 0 chr5 95126398 95126464 -107959068 + L1MC1 LINE L1 6237 6302 -31 496 229 66 16 chr5 95126755 95126938 -107958594 - MER95 LTR ERV 0 431 240 2285 78 7 0 chr5 95127088 95127395 -107958137 + AluY SINE Alu 1 309 -2 418 317 0 0 chr5 95127773 95127877 -107957655 + MIR SINE MIR 1 104 -158 261 189 49 90 chr5 95127989 95128111 -107957421 + LTR33A LTR ERVL 407 523 0 527 261 220 0 chr5 95128558 95128799 -107956733 + L2 LINE L2 2253 2546 -768 678 303 61 33 chr5 95128933 95129293 -107956239 + L2 LINE L2 2935 3304 -9 23 92 0 0 chr5 95129873 95129938 -107955594 + AT_rich Low_complexity Low_complexity 1 65 0 286 289 93 0 chr5 95130001 95130098 -107955434 - MIR SINE MIR -75 187 82 253 363 134 23 chr5 95130341 95130512 -107955020 - MIR SINE MIR -70 192 3 525 71 14 0 chr5 95131568 95131638 -107953894 + AluSp SINE Alu 67 137 -176 39650 48 51 1 chr5 95131638 95137493 -107948039 + L1HS LINE L1 1 6154 -1 24 0 0 0 chr5 95137493 95137517 -107948015 + AT_rich Low_complexity Low_complexity 1 24 0 1066 226 45 40 chr5 95137702 95137911 -107947621 - L1 LINE L1 -3002 3144 2931 2485 62 0 0 chr5 95137911 95138216 -107947316 - AluY SINE Alu -6 305 1 1066 226 45 40 chr5 95138216 95138386 -107947146 - L1 LINE L1 -3215 2931 2763 501 152 0 19 chr5 95139276 95139381 -107946151 + L1MA3 LINE L1 4404 4506 -1640 3422 191 22 31 chr5 95140792 95142389 -107943143 + L1MA3 LINE L1 4487 6043 -262 1511 222 55 8 chr5 95142133 95142494 -107943038 + L1PB4 LINE L1 5776 6153 -3 * 292 363 119 56 chr5 95143497 95143910 -107941622 - L2 LINE L2 -6 3266 2828 2394 80 0 0 chr5 95143915 95144216 -107941316 + AluY SINE Alu 1 301 -10 1237 279 200 65 chr5 95144522 95145096 -107940436 + MLT1E3 LTR MaLR 3 624 0 1738 189 0 60 chr5 95146268 95146634 -107938898 - MLT1C LTR MaLR -123 344 1 22 0 0 0 chr5 95147865 95147887 -107937645 + AT_rich Low_complexity Low_complexity 1 22 0 1533 217 135 23 chr5 95147888 95148413 -107937119 + L1MC4 LINE L1 7317 7900 -142 915 223 5 29 chr5 95199244 95199450 -107886082 + MER20 DNA MER1_type 1 201 -18 6428 71 6 3 chr5 95199547 95200407 -107885125 + L1PA7 LINE L1 5287 6148 -6 200 125 0 25 chr5 95200417 95200457 -107885075 + (TA)n Simple_repeat Simple_repeat 2 40 0 413 242 16 17 chr5 95200488 95200630 -107884902 + L1ME1 LINE L1 6034 6332 -2 1965 203 0 0 chr5 95200655 95201000 -107884532 + L1MA4A LINE L1 47 391 -6458 1071 217 5 0 chr5 95200990 95201193 -107884339 + L1MA4A LINE L1 1348 1551 -5298 * 1726 193 40 16 chr5 95201188 95201561 -107883971 + L1MA4A LINE L1 3367 3748 -3100 2401 138 33 0 chr5 95201561 95201922 -107883610 + MSTA LTR MaLR 1 373 -55 9672 175 22 13 chr5 95201922 95204810 -107880722 + L1MA4A LINE L1 4098 7005 0 209 284 95 26 chr5 95204866 95204982 -107880550 - L2 LINE L2 0 3313 3190 460 228 176 7 chr5 95205151 95205287 -107880245 - MIR SINE MIR -71 191 33 426 111 97 0 chr5 95205658 95205730 -107879802 + MLT1J2 LTR MaLR 354 432 -18 2671 91 13 8 chr5 95206591 95206964 -107878568 - THE1C LTR MaLR 0 375 1 2081 74 13 58 chr5 95207356 95207668 -107877864 - AluSc SINE Alu -11 298 1 982 102 0 0 chr5 95207668 95207795 -107877737 - AluSg1 SINE Alu -182 127 1 327 169 78 13 chr5 95208203 95208280 -107877252 - MARNA DNA Mariner -222 364 283 773 94 34 8 chr5 95208502 95208619 -107876913 + THE1C LTR MaLR 104 223 -152 778 209 27 0 chr5 95208622 95208809 -107876723 - MER69 DNA AcHobo -184 2342 2151 2409 82 3 0 chr5 95208903 95209209 -107876323 - AluSc SINE Alu -2 307 1 2762 266 82 45 chr5 95209250 95210158 -107875374 + L1MC4 LINE L1 6667 7639 -403 1790 137 46 80 chr5 95210158 95210546 -107874986 - THE1C LTR MaLR 0 375 1 2762 266 82 45 chr5 95210546 95210955 -107874577 + L1MC4 LINE L1 7639 8032 -10 30 0 0 0 chr5 95210956 95210986 -107874546 + AT_rich Low_complexity Low_complexity 1 30 0 202 257 38 0 chr5 95210986 95211091 -107874441 + (TA)n Simple_repeat Simple_repeat 2 110 0 2516 172 17 2 chr5 95211109 95211527 -107874005 + MSTB LTR MaLR 3 426 0 1999 172 11 3 chr5 95211547 95211901 -107873631 - L1PB4 LINE L1 -4 6152 5796 216 163 0 0 chr5 95211915 95211958 -107873574 + (TA)n Simple_repeat Simple_repeat 1 43 0 8006 179 22 12 chr5 95211958 95214123 -107871409 - L1PB4 LINE L1 -365 5791 3600 2428 101 19 29 chr5 95214615 95214993 -107870539 - THE1C LTR MaLR 0 375 2 192 77 0 0 chr5 95214994 95215020 -107870512 + (CA)n Simple_repeat Simple_repeat 1 26 0 717 256 24 43 chr5 95215113 95215324 -107870208 + MIR SINE MIR 1 207 -55 220 213 0 0 chr5 95215659 95215706 -107869826 - L2 LINE L2 0 3313 3267 468 257 109 28 chr5 95216797 95217041 -107868491 - MLT1H1 LTR MaLR 0 555 286 212 163 0 20 chr5 95217069 95217118 -107868414 + CT-rich Low_complexity Low_complexity 3 50 0 931 255 59 5 chr5 95217152 95217433 -107868099 - MLT1H1 LTR MaLR -298 292 2 931 241 18 28 chr5 95218116 95218349 -107867183 - MLT1H1 LTR MaLR -2 588 322 2583 43 0 0 chr5 95218387 95218687 -107866845 - AluY SINE Alu -11 300 1 180 0 0 0 chr5 95219163 95219183 -107866349 + (A)n Simple_repeat Simple_repeat 1 20 0 438 218 13 0 chr5 95219384 95219462 -107866070 - MER90 LTR ERV1 -2 612 534 1263 221 82 0 chr5 95219517 95219820 -107865712 - MER90 LTR ERV1 -242 333 6 2224 61 44 10 chr5 95221119 95221416 -107864116 + AluSx SINE Alu 1 307 -5 504 275 190 14 chr5 95222079 95222290 -107863242 - MIR SINE MIR 0 262 15 409 191 36 12 chr5 95222594 95222678 -107862854 + MER20 DNA MER1_type 1 86 -133 2025 116 0 11 chr5 95224408 95224693 -107860839 + AluSc SINE Alu 1 282 -27 1035 222 144 41 chr5 95225067 95225436 -107860096 - MLT2D LTR ERVL -7 407 1 2043 127 13 3 chr5 95225908 95226215 -107859317 + AluSg SINE Alu 1 310 0 1134 204 106 11 chr5 95226569 95226843 -107858689 - AluJo SINE Alu -2 300 1 291 250 38 0 chr5 95227747 95227827 -107857705 - MLT1L LTR MaLR -532 83 1 337 288 129 7 chr5 95228419 95228558 -107856974 + MLT1I LTR MaLR 244 399 -10 268 284 57 0 chr5 95229164 95229252 -107856280 + L2 LINE L2 3220 3312 -1 267 206 27 27 chr5 95229589 95229662 -107855870 + MER116 DNA Mariner 2 74 -6 693 219 62 40 chr5 95231187 95231411 -107854121 - L1ME2 LINE L1 -13 6151 5923 22 0 0 0 chr5 95231411 95231433 -107854099 + AT_rich Low_complexity Low_complexity 1 22 0 206 354 81 10 chr5 95231739 95231838 -107853694 + L2 LINE L2 3163 3268 -4 231 36 0 0 chr5 95233103 95233131 -107852401 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 447 19 0 0 chr5 95233130 95233182 -107852350 + (GA)n Simple_repeat Simple_repeat 2 53 0 310 107 18 89 chr5 95233182 95233238 -107852294 - Alu SINE Alu -29 271 227 1056 259 93 71 chr5 95233327 95233695 -107851837 - L2 LINE L2 -382 2932 2550 1769 216 111 27 chr5 95233695 95233749 -107851783 - MLT2B1 LTR ERVL 0 520 472 614 13 13 0 chr5 95233749 95233824 -107851708 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1769 216 111 27 chr5 95233824 95234247 -107851285 - MLT2B1 LTR ERVL -48 472 3 1056 259 93 71 chr5 95234247 95234341 -107851191 - L2 LINE L2 -764 2550 2460 249 270 63 36 chr5 95234343 95234454 -107851078 - MIR SINE MIR -113 149 36 2374 87 0 0 chr5 95235380 95235690 -107849842 + AluY SINE Alu 1 310 -1 394 167 56 0 chr5 95236183 95236255 -107849277 + MSTC LTR MaLR 1 76 -352 * 415 143 0 0 chr5 95236253 95236316 -107849216 - MSTC LTR MaLR -365 63 1 * 1322 240 135 36 chr5 95236316 95236707 -107848825 - LTR68 LTR ERV1 -310 430 1 296 261 81 125 chr5 95236718 95237013 -107848519 - MLT1I LTR MaLR -38 371 90 1858 190 25 6 chr5 95237280 95237638 -107847894 - MLT1A1 LTR MaLR 0 365 1 2347 93 0 0 chr5 95237661 95237961 -107847571 + AluY SINE Alu 1 300 -11 3179 219 12 6 chr5 95238337 95238986 -107846546 + MER82 DNA MER2_type 1 653 0 418 300 21 29 chr5 95239048 95239188 -107846344 + L3 LINE CR1 1438 1576 -1 231 36 0 0 chr5 95239597 95239625 -107845907 + (CA)n Simple_repeat Simple_repeat 1 28 0 375 23 0 0 chr5 95239666 95239710 -107845822 + (CA)n Simple_repeat Simple_repeat 1 44 0 200 378 51 0 chr5 95239873 95239971 -107845561 + L2 LINE L2 3202 3304 -9 1597 168 47 10 chr5 95239995 95240292 -107845240 + AluJo SINE Alu 1 308 -4 507 196 72 29 chr5 95240518 95240656 -107844876 + MLT1F1 LTR MaLR 1 144 -451 670 254 96 39 chr5 95240687 95241063 -107844469 + MLT1F1 LTR MaLR 152 553 -14 765 282 245 20 chr5 95244212 95244999 -107840533 + L2 LINE L2 2184 3196 -117 353 280 40 32 chr5 95245003 95245128 -107840404 - MIR3 SINE MIR -23 185 60 1707 183 169 0 chr5 95246336 95246702 -107838830 + MSTA LTR MaLR 1 428 0 9439 163 13 15 chr5 95246702 95248356 -107837176 + MSTA-int LTR MaLR 1 1651 0 1942 199 81 2 chr5 95248356 95248753 -107836779 + MSTA LTR MaLR 1 428 0 182 296 39 90 chr5 95248903 95249136 -107836396 - L2 LINE L2 -179 3093 2873 557 355 134 8 chr5 95249194 95249679 -107835853 - L2 LINE L2 -534 2780 2235 487 309 0 8 chr5 95250469 95250595 -107834937 - L2 LINE L2 -4 3309 3185 667 147 22 96 chr5 95250909 95251045 -107834487 + FLAM_A SINE Alu 1 126 -7 327 229 25 16 chr5 95251123 95251245 -107834287 + L1MC4 LINE L1 7128 7250 -792 263 320 10 10 chr5 95251265 95251365 -107834167 + L1MC4 LINE L1 7358 7457 -585 444 299 58 48 chr5 95251422 95251920 -107833612 + L1MC5 LINE L1 7313 7815 -146 1615 192 3 25 chr5 95253490 95253807 -107831725 + AluJo SINE Alu 1 310 -2 248 257 110 9 chr5 95253852 95253961 -107831571 + L1ME1 LINE L1 4792 4911 -1235 2876 217 55 31 chr5 95253974 95255088 -107830444 + L1ME1 LINE L1 4973 6128 -38 233 263 53 18 chr5 95255435 95255492 -107830040 - MER5A DNA MER1_type -81 108 50 288 0 0 0 chr5 95256320 95256352 -107829180 + (CA)n Simple_repeat Simple_repeat 2 33 0 30 27 0 0 chr5 95257812 95257849 -107827683 + AT_rich Low_complexity Low_complexity 1 37 0 2531 65 0 0 chr5 95257856 95258165 -107827367 + AluY SINE Alu 1 309 -2 279 0 0 0 chr5 95258165 95258196 -107827336 + (TA)n Simple_repeat Simple_repeat 1 31 0 502 248 61 0 chr5 95258213 95258403 -107827129 + L1ME1 LINE L1 5651 5860 -304 410 255 54 16 chr5 95258490 95258674 -107826858 - L1MC/D LINE L1 -2320 5488 5298 449 295 79 84 chr5 95258803 95259362 -107826170 - L1MC/D LINE L1 -1022 5124 4569 19315 139 21 11 chr5 95261446 95265557 -107819975 - L1PA11 LINE L1 -2 6172 2028 751 122 0 0 chr5 95265557 95265664 -107819868 - U6 snRNA snRNA 0 107 1 360 216 102 0 chr5 95266629 95266717 -107818815 + Charlie2 DNA MER1_type 54 150 -2712 342 284 17 0 chr5 95266785 95266901 -107818631 + Charlie2 DNA MER1_type 1896 2013 -849 267 149 179 0 chr5 95266964 95267031 -107818501 + Charlie2 DNA MER1_type 2534 2612 -250 2105 68 89 0 chr5 95267831 95268111 -107817421 + AluSx SINE Alu 1 305 -7 930 296 53 24 chr5 95268427 95268805 -107816727 + MLT1I LTR MaLR 1 389 -20 397 222 26 51 chr5 95268925 95269042 -107816490 - L2 LINE L2 -8 3264 3151 * 427 328 61 88 chr5 95269031 95269293 -107816239 - L3 LINE CR1 -1287 290 36 429 192 0 160 chr5 95270659 95270815 -107814717 - MER45A DNA AcHobo 0 178 48 220 306 16 0 chr5 95270839 95270901 -107814631 - MER5A DNA MER1_type -74 115 53 1884 173 46 0 chr5 95271248 95271571 -107813961 + MER7A DNA MER2_type 1 336 -10 30 0 0 0 chr5 95271820 95271850 -107813682 + AT_rich Low_complexity Low_complexity 1 30 0 3619 178 56 50 chr5 95272296 95273141 -107812391 + MER21A LTR ERV1 16 912 -19 1039 78 35 0 chr5 95273337 95273478 -107812054 - MLT2A2 LTR ERVL 0 453 308 * 1241 65 0 0 chr5 95273476 95273630 -107811902 + THE1C LTR MaLR 222 375 0 6469 128 37 10 chr5 95275642 95277086 -107808446 + L1MA3 LINE L1 4823 6305 0 22 0 0 0 chr5 95277086 95277108 -107808424 + AT_rich Low_complexity Low_complexity 1 22 0 2041 172 11 3 chr5 95277740 95278088 -107807444 - LTR57 LTR ERVL 0 411 61 25 0 0 0 chr5 95278202 95278227 -107807305 + AT_rich Low_complexity Low_complexity 1 25 0 288 302 47 23 chr5 95280421 95280550 -107804982 + MIR3 SINE MIR 13 144 -64 224 314 0 0 chr5 95280583 95280634 -107804898 - MIR3 SINE MIR -48 160 110 1656 156 0 57 chr5 95281226 95281540 -107803992 - AluJb SINE Alu -16 296 1 608 307 119 23 chr5 95283697 95284168 -107801364 + L2 LINE L2 2648 3171 -142 798 290 125 48 chr5 95284342 95285029 -107800503 - L2 LINE L2 -16 3297 2532 530 15 15 0 chr5 95285431 95285498 -107800034 + (TA)n Simple_repeat Simple_repeat 2 69 0 23 0 0 0 chr5 95285956 95285979 -107799553 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr5 95286706 95286729 -107798803 + (TTATA)n Simple_repeat Simple_repeat 4 26 0 1970 184 19 3 chr5 95286931 95287290 -107798242 + MLT1A1 LTR MaLR 1 365 0 249 309 145 40 chr5 95287290 95287442 -107798090 + MIR SINE MIR 51 218 -44 439 368 90 4 chr5 95287499 95287733 -107797799 + MIR SINE MIR 8 261 -1 28 71 0 0 chr5 95287865 95287921 -107797611 + AT_rich Low_complexity Low_complexity 1 56 0 2107 149 77 19 chr5 95287973 95288402 -107797130 + L1MA8 LINE L1 5831 6284 -7 509 322 28 6 chr5 95288506 95288683 -107796849 + L3 LINE CR1 1393 1573 -4 312 280 32 11 chr5 95288697 95288790 -107796742 + L3 LINE CR1 948 1042 -535 905 207 122 33 chr5 95288826 95289257 -107796275 - MER69 DNA AcHobo -3 2523 2024 1038 246 166 6 chr5 95289307 95289668 -107795864 - MER69 DNA AcHobo -798 428 10 1310 288 35 16 chr5 95289720 95290092 -107795440 + L3 LINE CR1 1165 1543 -34 370 259 315 5 chr5 95290527 95290724 -107794808 + MIR SINE MIR 2 259 -3 474 183 153 8 chr5 95291834 95291965 -107793567 - MLT1K LTR MaLR 0 588 439 795 244 39 6 chr5 95292221 95292401 -107793131 - MER5A DNA MER1_type -3 186 1 408 274 53 9 chr5 95292965 95293078 -107792454 + MER5B DNA MER1_type 7 124 -54 11594 177 48 31 chr5 95294498 95295322 -107790210 - Tigger4(Zombi) DNA MER2_type 0 2731 1923 2337 84 0 0 chr5 95295322 95295632 -107789900 - AluY SINE Alu -1 310 1 11594 177 48 31 chr5 95295632 95297488 -107788044 - Tigger4(Zombi) DNA MER2_type -808 1923 4 1157 152 35 26 chr5 95300007 95300238 -107785294 + Tigger1 DNA MER2_type 2186 2418 0 30 27 0 0 chr5 95303611 95303648 -107781884 + AT_rich Low_complexity Low_complexity 1 37 0 241 289 0 0 chr5 95304082 95304134 -107781398 - MIR SINE MIR -5 257 206 197 32 0 32 chr5 95304847 95304878 -107780654 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 180 309 113 62 chr5 95305950 95306047 -107779485 + MIR SINE MIR 46 147 -115 3820 31 0 0 chr5 95306747 95307222 -107778310 + L1PA3 LINE L1 5695 6169 0 5800 105 22 13 chr5 95307871 95309274 -107776258 - L1PA11 LINE L1 -2 6172 4771 2473 103 43 0 chr5 95309391 95309740 -107775792 - THE1B LTR MaLR 0 364 1 273 288 144 0 chr5 95312110 95312242 -107773290 + MIR SINE MIR 82 232 -30 21 0 0 0 chr5 95312582 95312603 -107772929 + AT_rich Low_complexity Low_complexity 1 21 0 208 184 0 0 chr5 95313145 95313183 -107772349 + L2 LINE L2 3276 3313 0 228 242 61 30 chr5 95313855 95313954 -107771578 + L2 LINE L2 3117 3218 -95 2097 129 35 27 chr5 95314878 95315250 -107770282 + THE1C LTR MaLR 1 375 0 233 125 0 111 chr5 95316124 95316196 -107769336 - L1MC4 LINE L1 -1339 6703 6640 603 181 181 13 chr5 95318394 95318549 -107766983 - MER5A DNA MER1_type 0 189 9 227 236 67 45 chr5 95318764 95318853 -107766679 - L2 LINE L2 -42 3230 3140 340 266 11 0 chr5 95319161 95319255 -107766277 + MARNA DNA Mariner 140 234 -352 1514 195 14 14 chr5 95319759 95320051 -107765481 - AluJb SINE Alu -20 292 1 222 323 247 0 chr5 95320128 95320221 -107765311 + L2 LINE L2 3147 3262 -10 238 325 0 44 chr5 95320640 95320754 -107764778 + CT-rich Low_complexity Low_complexity 2 110 0 5236 23 2 0 chr5 95321368 95321981 -107763551 - L1PA3 LINE L1 0 6155 5542 311 253 280 13 chr5 95322007 95322157 -107763375 + MIR SINE MIR 15 204 -58 463 128 20 69 chr5 95323705 95323807 -107761725 - L1MA7 LINE L1 0 6291 6195 308 291 109 43 chr5 95324019 95324229 -107761303 - L1MC4a LINE L1 -1732 6076 5853 266 295 110 48 chr5 95324251 95324435 -107761097 - L1MC4a LINE L1 -2026 5782 5580 1275 170 129 44 chr5 95324435 95324752 -107760780 + MER2 DNA MER2_type 1 344 0 266 295 110 48 chr5 95324752 95324794 -107760738 - L1MC4a LINE L1 -2228 5580 5542 2134 162 72 8 chr5 95324850 95325252 -107760280 - MSTA LTR MaLR 0 428 1 2112 125 10 3 chr5 95325762 95326073 -107759459 - AluSp SINE Alu 0 313 1 5069 121 51 70 chr5 95326540 95326804 -107758728 - L1MA4A LINE L1 -5 7360 7092 2480 57 0 0 chr5 95326804 95327105 -107758427 - AluY SINE Alu -10 301 1 5069 121 51 70 chr5 95327105 95327313 -107758219 - L1MA4A LINE L1 -273 7092 6882 2294 76 3 3 chr5 95327313 95327630 -107757902 + AluY SINE Alu 1 317 0 5069 121 51 70 chr5 95327630 95328202 -107757330 - L1MA4A LINE L1 -483 6882 6334 41151 64 5 2 chr5 95328247 95334376 -107751156 - L1PA5 LINE L1 0 6154 1 9545 204 35 27 chr5 95334377 95336867 -107748665 - L1MA4A LINE L1 -866 6342 3833 2166 190 16 7 chr5 95336881 95337375 -107748157 + L1PA15 LINE L1 4808 5307 -848 4851 149 20 6 chr5 95337456 95338290 -107747242 + L1PA15 LINE L1 5314 6159 -6 * 1435 195 6 80 chr5 95338290 95338603 -107746929 - AluJo SINE Alu -22 290 1 5221 171 15 45 chr5 95338603 95340232 -107745300 - L1MA4A LINE L1 -3359 3849 2255 3327 139 33 4 chr5 95340232 95340744 -107744788 - MER1A DNA MER1_type 0 527 1 5221 171 15 45 chr5 95340744 95340794 -107744738 - L1MA4A LINE L1 -4953 2255 2205 3723 233 18 14 chr5 95340784 95341645 -107743887 - L1MA4A LINE L1 -6145 1064 2 * 363 89 0 0 chr5 95341891 95341947 -107743585 + (GA)n Simple_repeat Simple_repeat 1 56 0 1769 190 68 77 chr5 95343068 95343525 -107742007 - MLT1C LTR MaLR 0 467 15 730 220 61 23 chr5 95343544 95343908 -107741624 + LTR16A1 LTR ERVL 1 418 -39 1621 207 51 53 chr5 95343908 95344191 -107741341 + MLT1D LTR MaLR 1 284 -221 2205 136 70 36 chr5 95344191 95344558 -107740974 + MSTB LTR MaLR 1 385 -41 2175 123 0 3 chr5 95344558 95344851 -107740681 - AluSq SINE Alu -21 292 1 2205 136 70 36 chr5 95344851 95344895 -107740637 + MSTB LTR MaLR 385 426 0 1621 207 51 53 chr5 95344895 95345084 -107740448 + MLT1D LTR MaLR 284 472 -33 316 308 192 19 chr5 95345213 95345427 -107740105 + MIR SINE MIR 8 258 -4 206 325 50 25 chr5 95345762 95345842 -107739690 + MER5A DNA MER1_type 7 88 -101 32 57 0 0 chr5 95346228 95346281 -107739251 + AT_rich Low_complexity Low_complexity 1 53 0 37 62 0 0 chr5 95346587 95346652 -107738880 + AT_rich Low_complexity Low_complexity 1 65 0 520 304 35 18 chr5 95348101 95348272 -107737260 - MER5A DNA MER1_type -1 188 15 520 304 35 18 chr5 95349255 95349426 -107736106 - MER5A DNA MER1_type -1 188 15 1017 301 106 10 chr5 95352329 95352775 -107732757 - MLT1H LTR MaLR -3 546 14 2106 70 16 79 chr5 95353898 95354213 -107731319 - AluY SINE Alu -16 295 1 1103 150 12 0 chr5 95355629 95355802 -107729730 - AluSx SINE Alu -8 302 128 33 25 0 0 chr5 95355803 95355843 -107729689 + AT_rich Low_complexity Low_complexity 1 40 0 847 143 16 0 chr5 95355844 95355859 -107729673 - AluSx SINE Alu -179 133 120 20267 35 1 2 chr5 95355859 95359116 -107726416 - L1PA3 LINE L1 -2 6153 2901 847 143 16 0 chr5 95359116 95359226 -107726306 - AluSx SINE Alu -192 120 6 271 378 22 17 chr5 95361175 95361355 -107724177 - L2 LINE L2 -581 2733 2553 3230 107 15 2 chr5 95361904 95362382 -107723150 - L1PB1 LINE L1 0 6151 5668 2001 148 10 0 chr5 95362614 95362917 -107722615 - AluSx SINE Alu -6 306 1 303 323 0 53 chr5 95363109 95363223 -107722309 + MIR SINE MIR 27 140 -68 371 215 13 13 chr5 95363280 95363359 -107722173 + MER63 DNA MER1_type 978 1056 -4 2548 124 45 38 chr5 95364189 95364632 -107720900 + MER83 LTR ERV1 3 448 0 327 217 61 26 chr5 95365638 95365753 -107719779 + LTR37B LTR ERV1 6 124 -344 216 200 0 0 chr5 95366024 95366069 -107719463 + (TA)n Simple_repeat Simple_repeat 1 45 0 1759 181 4 0 chr5 95366134 95366415 -107719117 + AluJb SINE Alu 1 282 -30 198 244 0 0 chr5 95367338 95367379 -107718153 + L2 LINE L2 3265 3305 -8 587 132 47 39 chr5 95368064 95368193 -107717339 - L1MA9 LINE L1 -157 6155 6026 258 266 138 28 chr5 95368408 95368517 -107717015 - MIR SINE MIR -64 144 24 3976 154 15 34 chr5 95368524 95369265 -107716267 - LTR8A LTR ERV1 0 727 1 208 278 113 87 chr5 95369583 95369698 -107715834 - MIR SINE MIR -62 146 29 194 396 30 10 chr5 95370255 95370356 -107715176 + MIR3 SINE MIR 54 156 -52 5010 177 81 0 chr5 95372353 95373268 -107712264 - MSTA-int LTR MaLR -662 989 1 2518 140 39 5 chr5 95373268 95373682 -107711850 - MSTA LTR MaLR 0 428 1 976 197 5 21 chr5 95373683 95373876 -107711656 - L1M3 LINE L1 -411 5757 5568 310 316 21 0 chr5 95373912 95374007 -107711525 - MIR SINE MIR -119 143 47 2157 126 0 3 chr5 95374076 95374402 -107711130 - AluSc SINE Alu 0 325 1 563 283 45 47 chr5 95374529 95374919 -107710613 - MER57A LTR ERV1 0 403 44 370 368 38 8 chr5 95375443 95375576 -107709956 + L2 LINE L2 3136 3272 0 33569 110 11 32 chr5 95375942 95382215 -107703317 - L1PA7 LINE L1 -5 6149 12 536 239 125 22 chr5 95382511 95382641 -107702891 + MER3 DNA MER1_type 2 158 -51 180 0 0 0 chr5 95382641 95382661 -107702871 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 536 239 125 22 chr5 95382661 95382714 -107702818 + MER3 DNA MER1_type 158 204 -5 198 0 0 0 chr5 95382732 95382754 -107702778 + (TA)n Simple_repeat Simple_repeat 2 23 0 5420 172 11 21 chr5 95382754 95383864 -107701668 - L1 LINE L1 -841 5305 4207 1960 134 3 0 chr5 95383906 95384218 -107701314 - AluSx SINE Alu 0 313 1 5427 153 20 16 chr5 95384218 95385177 -107700355 + L1MA4 LINE L1 5335 6297 -3 508 287 115 48 chr5 95385431 95385942 -107699590 - L1MEd LINE L1 -867 1623 976 198 0 0 0 chr5 95386176 95386198 -107699334 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 623 266 36 126 chr5 95386843 95387231 -107698301 - MLT1A1 LTR MaLR -12 353 1 21 57 0 0 chr5 95387249 95387284 -107698248 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 95387825 95387846 -107697686 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 95388708 95388743 -107696789 + AT_rich Low_complexity Low_complexity 1 35 0 184 348 68 59 chr5 95388818 95388936 -107696596 + L2 LINE L2 3195 3313 0 323 179 26 34 chr5 95389242 95389359 -107696173 + (TATG)n Simple_repeat Simple_repeat 1 116 0 423 0 0 0 chr5 95390315 95390362 -107695170 + (CA)n Simple_repeat Simple_repeat 2 48 0 2160 101 7 0 chr5 95391121 95391407 -107694125 - AluSg SINE Alu -21 289 2 267 262 0 0 chr5 95391789 95391850 -107693682 - MER92C LTR ERV1 -3 551 491 271 261 45 0 chr5 95392526 95392614 -107692918 + L1MEd LINE L1 925 1016 -5103 2118 65 61 0 chr5 95392726 95393042 -107692490 + AluSp SINE Alu 1 333 0 335 294 196 18 chr5 95393057 95393343 -107692189 + HAL1 LINE L1 1297 1633 -874 1350 229 43 24 chr5 95393825 95394200 -107691332 - L1MC4a LINE L1 -111 7697 7316 1253 170 170 4 chr5 95394200 95394470 -107691062 + MER7A DNA MER2_type 2 314 -32 5946 220 65 43 chr5 95394499 95396539 -107688993 - L1MC4a LINE L1 -700 7108 5024 1421 81 25 0 chr5 95397287 95397485 -107688047 - L1PA7 LINE L1 0 6154 5952 2201 272 57 56 chr5 95397705 95399291 -107686241 - L1MC4a LINE L1 -869 5277 4469 1421 81 25 0 chr5 95399291 95399489 -107686043 - L1PA7 LINE L1 0 6154 5952 2201 272 57 56 chr5 95399489 95399564 -107685968 - L1MC4a LINE L1 -1677 4469 4396 286 269 0 51 chr5 95399608 95399780 -107685752 - MIR SINE MIR -32 230 11 2014 155 60 0 chr5 95400067 95400403 -107685129 + MSTB1 LTR MaLR 76 431 -1 228 213 16 16 chr5 95401579 95401640 -107683892 + GA-rich Low_complexity Low_complexity 3 63 0 321 274 107 71 chr5 95403065 95403206 -107682326 - MIR3 SINE MIR -3 205 56 1902 79 23 0 chr5 95403206 95403471 -107682061 - L1PA13 LINE L1 -1 6162 5892 321 274 107 71 chr5 95403471 95403497 -107682035 - MIR3 SINE MIR -152 56 32 395 192 48 29 chr5 95404252 95404356 -107681176 + MIR SINE MIR 48 153 -109 1101 113 4 22 chr5 95404443 95404629 -107680903 - MER34B LTR ERV1 -395 170 1 29 0 0 0 chr5 95404637 95404666 -107680866 + AT_rich Low_complexity Low_complexity 1 29 0 328 376 43 0 chr5 95404783 95404924 -107680608 + L2 LINE L2 3126 3272 0 25 31 0 0 chr5 95404930 95404962 -107680570 + AT_rich Low_complexity Low_complexity 1 32 0 184 330 57 11 chr5 95406111 95406199 -107679333 - MIR SINE MIR -112 150 59 1322 223 223 1 chr5 95408179 95408572 -107676960 - MLT1F1 LTR MaLR -14 553 53 374 167 45 0 chr5 95408596 95408662 -107676870 - MER8 DNA MER2_type -1 238 170 274 216 0 0 chr5 95408804 95408855 -107676677 - MER2 DNA MER2_type -267 78 28 30 59 0 0 chr5 95408862 95408913 -107676619 + AT_rich Low_complexity Low_complexity 1 51 0 402 252 228 0 chr5 95409281 95409404 -107676128 - MER5A DNA MER1_type -30 159 9 180 0 0 0 chr5 95409845 95409865 -107675667 + (CATGC)n Simple_repeat Simple_repeat 5 24 0 1111 265 90 67 chr5 95410957 95411481 -107674051 - MER21B LTR ERV1 -196 667 132 364 269 8 46 chr5 95411524 95411654 -107673878 - MER77 LTR ERV1 -417 188 64 6208 162 29 23 chr5 95413308 95414745 -107670787 + L1MA4 LINE L1 4122 5583 -717 2200 117 10 0 chr5 95414745 95415054 -107670478 + AluSx SINE Alu 1 312 0 6208 162 29 23 chr5 95415054 95415774 -107669758 + L1MA4 LINE L1 5583 6297 -3 247 213 32 0 chr5 95417114 95417208 -107668324 + (CATA)n Simple_repeat Simple_repeat 2 98 0 245 200 0 0 chr5 95417264 95417309 -107668223 - MIR SINE MIR -34 228 184 523 214 0 0 chr5 95417364 95417462 -107668070 - AluJb SINE Alu -25 287 190 495 183 206 0 chr5 95417991 95418122 -107667410 - MER20 DNA MER1_type -61 158 1 190 343 0 0 chr5 95419010 95419083 -107666449 + L3 LINE CR1 400 472 -1105 1271 194 50 12 chr5 95419122 95419380 -107666152 + L1MC1 LINE L1 6066 6333 0 922 311 121 30 chr5 95419498 95420102 -107665430 + L3 LINE CR1 630 1288 -289 969 245 21 9 chr5 95420839 95421072 -107664460 - L1MB1 LINE L1 0 6168 5933 224 196 22 0 chr5 95422521 95422567 -107662965 - L2 LINE L2 -6 3307 3261 388 281 120 6 chr5 95422819 95422986 -107662546 + MIR SINE MIR 11 196 -66 2553 46 0 0 chr5 95423444 95423751 -107661781 - AluY SINE Alu -4 307 1 2436 57 7 0 chr5 95423915 95424212 -107661320 + AluSp SINE Alu 4 302 -11 230 88 0 0 chr5 95424217 95424251 -107661281 - HSMAR1 DNA Mariner -1253 34 1 1010 327 53 30 chr5 95424966 95425602 -107659930 + L1MC4a LINE L1 5255 5905 -1903 285 233 31 94 chr5 95425823 95425982 -107659550 + L1ME4a LINE L1 5973 6121 0 204 97 0 0 chr5 95426128 95426159 -107659373 + (T)n Simple_repeat Simple_repeat 1 31 0 569 74 0 0 chr5 95426196 95426277 -107659255 - L1PA13 LINE L1 -3 6160 6080 6428 25 8 0 chr5 95426277 95427032 -107658500 - L1PA4 LINE L1 -3 6152 5392 3336 32 1 0 chr5 95427029 95427459 -107658073 + L1P LINE L1 4978 5411 -740 * 187 292 62 0 chr5 95427667 95427715 -107657817 - L2 LINE L2 -6 3266 3216 201 360 110 30 chr5 95427846 95428046 -107657486 - L2 LINE L2 -166 3106 2891 257 261 90 54 chr5 95428093 95428204 -107657328 + L2 LINE L2 3136 3250 -22 22 0 0 0 chr5 95428481 95428503 -107657029 + AT_rich Low_complexity Low_complexity 1 22 0 719 279 142 16 chr5 95428508 95428995 -107656537 - HAL1 LINE L1 -322 2185 1638 5699 228 65 15 chr5 95428995 95431050 -107654482 - L1ME LINE L1 -529 5706 3549 1140 117 15 10 chr5 95431354 95431550 -107653982 - L1MA4A LINE L1 -205 6098 5902 272 298 32 0 chr5 95431557 95431681 -107653851 - L1ME LINE L1 -2799 3416 3289 235 195 0 0 chr5 95431860 95431901 -107653631 - HAL1 LINE L1 -1618 889 849 657 203 0 0 chr5 95432256 95432374 -107653158 - Tigger1 DNA MER2_type 0 2418 2301 1128 173 9 42 chr5 95432375 95432589 -107652943 + AluJb SINE Alu 87 293 -19 12217 132 42 51 chr5 95432589 95434896 -107650636 - Tigger1 DNA MER2_type -109 2309 25 239 324 121 6 chr5 95435007 95435180 -107650352 - HAL1 LINE L1 -2313 194 2 28 29 0 0 chr5 95435569 95435604 -107649928 + AT_rich Low_complexity Low_complexity 1 35 0 1318 213 9 60 chr5 95436502 95436817 -107648715 + AluJb SINE Alu 1 299 -13 948 196 6 0 chr5 95436979 95437147 -107648385 - FAM SINE Alu -5 44 1 21 0 0 0 chr5 95437736 95437757 -107647775 + AT_rich Low_complexity Low_complexity 1 21 0 545 245 12 61 chr5 95437770 95437933 -107647599 - L2 LINE L2 -1 3312 3158 21 57 0 0 chr5 95437940 95437975 -107647557 + AT_rich Low_complexity Low_complexity 1 35 0 1880 298 37 29 chr5 95438132 95439049 -107646483 - L1ME LINE L1 -5454 942 19 225 0 0 0 chr5 95439671 95439696 -107645836 + (T)n Simple_repeat Simple_repeat 1 25 0 1330 184 78 105 chr5 95440259 95440573 -107644959 - MLT1C LTR MaLR -2 465 167 1728 178 3 7 chr5 95440573 95440860 -107644672 - AluJo SINE Alu -25 287 2 1330 184 78 105 chr5 95440860 95441022 -107644510 - MLT1C LTR MaLR -300 167 2 2063 148 33 6 chr5 95441089 95441454 -107644078 - L1PA16 LINE L1 -5 6161 5787 526 298 13 19 chr5 95441610 95441768 -107643764 - MIR SINE MIR -93 169 13 570 179 76 21 chr5 95441768 95441913 -107643619 - Charlie4a DNA MER1_type -2 506 354 275 173 53 27 chr5 95441938 95442013 -107643519 - MER116 DNA Mariner -3 77 1 * 1075 205 93 0 chr5 95442013 95442280 -107643252 - Charlie4a DNA MER1_type -175 333 42 749 270 28 24 chr5 95443745 95443956 -107641576 + MIR SINE MIR 51 262 0 2299 62 3 7 chr5 95444233 95444524 -107641008 + AluY SINE Alu 1 290 -21 365 328 102 51 chr5 95444910 95445090 -107640442 - L2 LINE L2 -926 2388 2219 1063 240 20 86 chr5 95445090 95445486 -107640046 - MLT1A2 LTR MaLR -4 370 1 365 328 102 51 chr5 95445486 95445652 -107639880 - L2 LINE L2 -1095 2219 2013 2756 13 0 0 chr5 95445652 95445961 -107639571 + AluY SINE Alu 1 309 -2 365 328 102 51 chr5 95445961 95446046 -107639486 - L2 LINE L2 -1301 2013 1934 1686 178 13 22 chr5 95446066 95446380 -107639152 + AluJo SINE Alu 1 311 -1 239 374 24 0 chr5 95446764 95446847 -107638685 - MIR SINE MIR -78 130 46 528 16 0 0 chr5 95447366 95447427 -107638105 + (TAG)n Simple_repeat Simple_repeat 2 62 0 376 233 128 0 chr5 95447471 95447557 -107637975 + MER5A DNA MER1_type 93 189 0 1934 88 7 11 chr5 95447978 95448261 -107637271 - L1PA14 LINE L1 -3 7596 7315 532 138 43 0 chr5 95448268 95448362 -107637170 + AluJ/FRAM SINE Alu 214 311 -1 11379 206 118 19 chr5 95448610 95449491 -107636041 - L1PA14 LINE L1 -302 7297 6505 3818 33 26 0 chr5 95449491 95449982 -107635550 + L1PA4 LINE L1 5649 6152 -3 11379 206 118 19 chr5 95449982 95453517 -107632015 - L1PA14 LINE L1 -1094 6505 2386 7266 144 14 24 chr5 95453619 95454852 -107630680 - L1PA14 LINE L1 -5219 2362 1143 327 39 0 116 chr5 95556062 95556217 -107529315 + (TA)n Simple_repeat Simple_repeat 2 138 0 187 96 24 96 chr5 95556243 95556410 -107529122 + (TA)n Simple_repeat Simple_repeat 1 155 0 426 37 31 94 chr5 95556444 95556635 -107528897 + (TA)n Simple_repeat Simple_repeat 1 179 0 199 103 82 31 chr5 95556668 95556765 -107528767 + (CTATA)n Simple_repeat Simple_repeat 2 103 0 210 113 84 42 chr5 95556784 95556855 -107528677 + (CTATA)n Simple_repeat Simple_repeat 2 75 0 261 84 31 94 chr5 95556858 95557049 -107528483 + (TA)n Simple_repeat Simple_repeat 1 179 0 1927 69 30 8 chr5 95557205 95557467 -107528065 + MLT2A1 LTR ERVL 16 283 -161 25 65 0 0 chr5 95558953 95558999 -107526533 + AT_rich Low_complexity Low_complexity 1 46 0 347 344 129 21 chr5 95559539 95559780 -107525752 + L1MEd LINE L1 102 368 -5751 1898 284 74 60 chr5 95560058 95561587 -107523945 + L1MEc LINE L1 77 1627 -4769 36426 97 15 9 chr5 95561587 95567699 -107517833 + L1PA6 LINE L1 1 6151 -3 874 224 163 45 chr5 95567695 95568292 -107517240 + L1MEc LINE L1 1615 2281 -4115 * 385 283 31 4 chr5 95568265 95568491 -107517041 + L1MEc LINE L1 2931 3162 -3053 * 15639 175 41 13 chr5 95568506 95571077 -107514455 + L1PB2 LINE L1 7 2506 -4356 2117 116 0 0 chr5 95571077 95571352 -107514180 - AluSx SINE Alu -37 275 1 15639 175 41 13 chr5 95571352 95573771 -107511761 + L1PB2 LINE L1 2506 5124 -1738 20619 156 55 61 chr5 95573821 95579019 -107506513 + L1PA10 LINE L1 14 5187 -1296 1741 179 11 0 chr5 95579019 95579304 -107506228 + AluSx SINE Alu 1 288 -24 20619 156 55 61 chr5 95579304 95580592 -107504940 + L1PA10 LINE L1 5187 6482 -1 4143 164 28 32 chr5 95580603 95581835 -107503697 + L1PB2 LINE L1 5123 6350 -517 4204 151 20 7 chr5 95581837 95582533 -107502999 - MER50 LTR ERV1 -23 711 7 3515 115 2 15 chr5 95582535 95583066 -107502466 + L1PB2 LINE L1 6344 6867 0 1085 216 124 42 chr5 95583212 95583589 -107501943 + MLT1C LTR MaLR 7 576 -50 385 290 42 5 chr5 95583600 95583814 -107501718 + L1M4 LINE L1 3073 3294 -2852 3432 224 54 29 chr5 95583819 95584692 -107500840 + L1PA15-16 LINE L1 9 903 -5946 285 341 6 55 chr5 95585074 95585238 -107500294 + L1PBb LINE L1 699 854 -5996 183 205 0 0 chr5 95585240 95585279 -107500253 + CT-rich Low_complexity Low_complexity 47 85 0 * 429 20 0 0 chr5 95585273 95585323 -107500209 + (TC)n Simple_repeat Simple_repeat 1 50 0 2407 47 40 3 chr5 95585334 95585633 -107499899 - AluY SINE Alu 0 311 2 560 291 20 0 chr5 95586031 95586179 -107499353 + L1PBb LINE L1 1323 1473 -5376 2863 94 8 8 chr5 95586181 95586900 -107498632 + L1P4 LINE L1 4918 5637 -526 467 266 20 106 chr5 95587644 95587704 -107497828 - MER113 DNA MER1_type? -3 518 454 1664 161 3 33 chr5 95587704 95588003 -107497529 - AluJo SINE Alu -22 290 1 467 266 20 106 chr5 95588003 95588292 -107497240 - MER113 DNA MER1_type? -67 454 199 807 224 6 0 chr5 95589701 95589857 -107495675 + FRAM SINE Alu 3 159 -17 325 226 60 0 chr5 95589858 95589942 -107495590 - L1MC4 LINE L1 -1339 6703 6615 27 29 0 0 chr5 95590517 95590551 -107494981 + AT_rich Low_complexity Low_complexity 1 34 0 223 336 62 7 chr5 95590734 95590880 -107494652 + L3b LINE CR1 1261 1414 -169 2552 30 17 3 chr5 95591613 95591915 -107493617 + AluY SINE Alu 1 306 -5 339 266 46 9 chr5 95592705 95592814 -107492718 + L2 LINE L2 3200 3312 -1 22 35 0 0 chr5 95592983 95593012 -107492520 + AT_rich Low_complexity Low_complexity 1 29 0 843 244 118 0 chr5 95593775 95593996 -107491536 + MIR SINE MIR 10 256 -6 180 0 0 0 chr5 95594841 95594861 -107490671 + (T)n Simple_repeat Simple_repeat 1 20 0 592 254 0 0 chr5 95595030 95595148 -107490384 - MER45A DNA AcHobo 0 178 61 414 0 0 0 chr5 95596332 95596378 -107489154 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1863 156 7 7 chr5 95597061 95597390 -107488142 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 95598091 95598114 -107487418 + AT_rich Low_complexity Low_complexity 1 23 0 2740 13 0 0 chr5 95598116 95598415 -107487117 + AluY SINE Alu 1 299 -12 194 385 21 0 chr5 95601211 95601307 -107484225 + MIR SINE MIR 48 145 -63 39 0 0 0 chr5 95601676 95601715 -107483817 + AT_rich Low_complexity Low_complexity 1 39 0 527 101 16 58 chr5 95601715 95601903 -107483629 + (TA)n Simple_repeat Simple_repeat 1 180 0 268 105 32 57 chr5 95601916 95602040 -107483492 + (TA)n Simple_repeat Simple_repeat 1 121 0 450 314 59 43 chr5 95602827 95603072 -107482460 - L1MC4a LINE L1 -245 5876 5654 910 205 6 0 chr5 95603097 95603268 -107482264 + AluJb SINE Alu 134 305 -7 764 294 79 44 chr5 95604371 95604776 -107480756 - MLT1K LTR MaLR -47 541 123 24 32 0 0 chr5 95604919 95604950 -107480582 + AT_rich Low_complexity Low_complexity 1 31 0 184 271 68 0 chr5 95604986 95605045 -107480487 - MIR SINE MIR -75 187 125 41 48 0 0 chr5 95605916 95605978 -107479554 + AT_rich Low_complexity Low_complexity 1 62 0 6078 111 10 13 chr5 95605984 95606922 -107478610 - L1MA3 LINE L1 -2 6303 5369 2392 95 0 0 chr5 95606922 95607226 -107478306 - AluSc SINE Alu -5 304 1 714 219 7 0 chr5 95607243 95607389 -107478143 - MER46B DNA MER2_type -214 22 1 2743 166 20 20 chr5 95607863 95608406 -107477126 - L1MC1 LINE L1 -129 6204 5662 400 241 46 0 chr5 95608455 95608563 -107476969 + MER94 DNA DNA 1 113 -21 312 341 6 37 chr5 95608664 95608828 -107476704 - MIR3 SINE MIR -3 205 47 707 319 55 8 chr5 95609542 95609780 -107475752 + MIR SINE MIR 14 262 0 294 345 0 0 chr5 95611531 95611618 -107473914 - L3 LINE CR1 -8 1569 1483 361 336 92 59 chr5 95611666 95612088 -107473444 - MLT1K LTR MaLR -6 582 147 206 325 95 56 chr5 95612553 95612679 -107472853 + L2 LINE L2 3134 3264 -8 1576 266 31 22 chr5 95612835 95613293 -107472239 + LTR40b LTR ERVL 1 462 0 180 343 79 7 chr5 95613711 95613851 -107471681 + L2 LINE L2 2590 2739 -575 933 316 47 39 chr5 95613919 95614404 -107471128 - MLT1J LTR MaLR -21 490 2 223 266 128 11 chr5 95614647 95614741 -107470791 - MIR SINE MIR -109 153 49 934 173 0 0 chr5 95614743 95614893 -107470639 - AluSq/x SINE Alu -162 150 1 21 57 0 0 chr5 95615555 95615590 -107469942 + AT_rich Low_complexity Low_complexity 1 35 0 1424 165 8 8 chr5 95616725 95616985 -107468547 - AluSq SINE Alu 0 313 54 313 333 13 19 chr5 95617292 95617448 -107468084 + MERVL LTR ERVL 3615 3769 -1716 735 271 0 38 chr5 95617660 95617870 -107467662 + MERVL LTR ERVL 4105 4306 -1458 2174 53 107 0 chr5 95617884 95618165 -107467367 - AluY SINE Alu 0 311 1 265 364 16 0 chr5 95618370 95618491 -107467041 + MERVL LTR ERVL 4522 4644 -1120 684 246 45 5 chr5 95618491 95618690 -107466842 - L1MB7 LINE L1 -1 6183 5958 584 343 14 9 chr5 95618811 95619027 -107466505 + MERVL LTR ERVL 4776 4992 -772 1039 309 69 17 chr5 95619531 95619939 -107465593 + LTR16A LTR ERVL 20 448 -2 1603 112 4 22 chr5 95620125 95620387 -107465145 - L1MA5A LINE L1 -4 6293 6035 2129 140 0 0 chr5 95620387 95620694 -107464838 - AluSx SINE Alu -5 307 1 210 150 0 0 chr5 95621250 95621290 -107464242 + (CA)n Simple_repeat Simple_repeat 1 40 0 1144 257 111 14 chr5 95621379 95621866 -107463666 + L1ME3A LINE L1 4743 5276 -870 2836 202 19 0 chr5 95621866 95622382 -107463150 + L1MA4A LINE L1 3 528 -6321 5708 162 34 9 chr5 95622400 95623004 -107462528 + L1MA4A LINE L1 5376 5964 -1041 270 56 0 0 chr5 95623004 95623040 -107462492 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5708 162 34 9 chr5 95623040 95624038 -107461494 + L1MA4A LINE L1 5964 7002 -3 1298 237 92 119 chr5 95624034 95624392 -107461140 + L1ME3A LINE L1 5263 5629 -541 * 12184 184 28 7 chr5 95624392 95627686 -107457846 + L1PA15 LINE L1 2814 6160 -5 1298 237 92 119 chr5 95627686 95628252 -107457280 + L1ME3A LINE L1 5629 6162 -8 2147 132 22 24 chr5 95628412 95628782 -107456750 - THE1C LTR MaLR -2 373 5 25 51 0 0 chr5 95629461 95629500 -107456032 + AT_rich Low_complexity Low_complexity 1 39 0 505 133 0 0 chr5 95629650 95629725 -107455807 + AluJ/FLAM SINE Alu 1 75 -237 1120 179 0 6 chr5 95629825 95630029 -107455503 + AluSg/x SINE Alu 106 308 0 197 163 20 0 chr5 95630100 95630149 -107455383 + (TA)n Simple_repeat Simple_repeat 2 51 0 22 0 0 0 chr5 95630711 95630733 -107454799 + AT_rich Low_complexity Low_complexity 1 22 0 7459 26 0 4 chr5 95630733 95632000 -107453532 - L1PA4 LINE L1 0 6155 4887 415 101 0 14 chr5 95632000 95632069 -107453463 + L1PA4 LINE L1 4815 4882 -1264 354 151 0 0 chr5 95632214 95632287 -107453245 + GA-rich Low_complexity Low_complexity 1 73 0 222 376 128 0 chr5 95632311 95632460 -107453072 + MIR3 SINE MIR 12 179 -29 646 193 8 0 chr5 95633410 95633529 -107452003 + FLAM_A SINE Alu 1 120 -13 303 390 17 17 chr5 95635528 95635646 -107449886 - MIR SINE MIR -137 125 8 949 326 206 21 chr5 95636286 95637579 -107447953 - L2 LINE L2 -619 2695 1163 344 329 19 26 chr5 95638905 95639060 -107446472 - L2 LINE L2 -208 3105 2952 553 327 143 32 chr5 95639289 95639751 -107445781 - L2 LINE L2 -347 2967 2455 285 29 0 0 chr5 95639789 95639823 -107445709 + (GA)n Simple_repeat Simple_repeat 1 34 0 24 0 0 0 chr5 95640213 95640237 -107445295 + AT_rich Low_complexity Low_complexity 1 24 0 278 313 71 40 chr5 95640292 95640442 -107445090 - MIR SINE MIR -76 132 32 324 120 0 0 chr5 95640470 95640520 -107445012 + (CA)n Simple_repeat Simple_repeat 2 51 0 1338 207 32 43 chr5 95640542 95640890 -107444642 + MER2 DNA MER2_type 1 344 0 1144 215 151 0 chr5 95642762 95643060 -107442472 + MER2 DNA MER2_type 1 343 -1 2146 161 6 11 chr5 95643319 95643672 -107441860 - MLT1A1 LTR MaLR -12 353 3 1129 229 41 18 chr5 95645140 95645494 -107440038 - MSTD LTR MaLR 0 396 3 1038 278 56 30 chr5 95646042 95646380 -107439152 - MLT1I LTR MaLR -6 403 57 484 295 21 155 chr5 95646406 95646757 -107438775 - L2 LINE L2 -10 3303 3053 2132 97 3 21 chr5 95646757 95647045 -107438487 + AluSq SINE Alu 1 283 -30 484 295 21 155 chr5 95647045 95647255 -107438277 - L2 LINE L2 -260 3053 2817 1150 291 168 44 chr5 95647368 95648123 -107437409 - L2 LINE L2 -746 2568 1720 574 364 42 11 chr5 95648130 95648394 -107437138 - L2 LINE L2 -2070 1244 973 201 311 0 0 chr5 95648720 95648765 -107436767 - L2 LINE L2 -665 2649 2605 309 373 76 7 chr5 95649474 95649675 -107435857 + MIR SINE MIR 2 212 -50 1849 176 57 49 chr5 95649718 95650072 -107435460 + MLT2D LTR ERVL 17 376 -38 387 60 0 0 chr5 95650072 95650122 -107435410 + (CA)n Simple_repeat Simple_repeat 2 51 0 1849 176 57 49 chr5 95650122 95650154 -107435378 + MLT2D LTR ERVL 376 406 -8 262 330 0 37 chr5 95650157 95650266 -107435266 - LTR67 LTR ERVL -46 511 407 2514 21 0 0 chr5 95650634 95650923 -107434609 - L1PA4 LINE L1 -2 6153 5865 630 266 48 48 chr5 95651408 95651656 -107433876 - MIR SINE MIR -3 259 12 2031 157 0 0 chr5 95651736 95652048 -107433484 - AluSx SINE Alu 0 312 1 21 57 0 0 chr5 95653538 95653573 -107431959 + AT_rich Low_complexity Low_complexity 1 35 0 212 244 76 46 chr5 95653620 95653751 -107431781 - MIR SINE MIR -42 220 86 201 74 0 0 chr5 95655210 95655237 -107430295 + (A)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 95655414 95655442 -107430090 + AT_rich Low_complexity Low_complexity 1 28 0 28 79 0 0 chr5 95655478 95655541 -107429991 + AT_rich Low_complexity Low_complexity 1 63 0 196 211 0 58 chr5 95655649 95655701 -107429831 + L2 LINE L2 3221 3269 -3 832 165 0 0 chr5 95655894 95656021 -107429511 + FLAM_C SINE Alu 1 127 -16 688 281 45 29 chr5 95656546 95656788 -107428744 + MIR SINE MIR 7 252 -10 1617 227 69 23 chr5 95656790 95657222 -107428310 + LTR40c LTR ERVL 1 452 -13 780 296 28 0 chr5 95657535 95657751 -107427781 + HERVL40 LTR ERVL 926 1147 -4383 412 245 20 33 chr5 95658197 95658348 -107427184 + HERVL40 LTR ERVL 1446 1594 -3936 1177 266 20 39 chr5 95658455 95659066 -107426466 + HERVL40 LTR ERVL 2662 3308 -2222 2570 261 40 39 chr5 95659085 95659498 -107426034 + HERVL40 LTR ERVL 3450 3866 -1664 1975 147 3 0 chr5 95659498 95659791 -107425741 - AluSg SINE Alu -16 294 1 2570 261 40 39 chr5 95659791 95660119 -107425413 + HERVL40 LTR ERVL 3866 4192 -1338 879 239 47 39 chr5 95660119 95660374 -107425158 + LTR40b LTR ERVL 206 462 0 21 0 0 0 chr5 95661203 95661224 -107424308 + AT_rich Low_complexity Low_complexity 1 21 0 261 146 0 0 chr5 95661540 95661588 -107423944 + (CATA)n Simple_repeat Simple_repeat 3 50 0 21 36 0 0 chr5 95661640 95661668 -107423864 + AT_rich Low_complexity Low_complexity 1 28 0 2364 175 30 124 chr5 95661902 95662578 -107422954 - LTR9 LTR ERV1 0 612 1 3939 174 27 14 chr5 95662693 95663404 -107422128 + MER72 LTR ERV1 3 722 0 1682 191 0 7 chr5 95663422 95663720 -107421812 - AluJb SINE Alu -16 296 1 402 242 17 25 chr5 95663879 95663999 -107421533 + MER112 DNA MER1_type 5 123 -137 703 228 107 61 chr5 95664046 95664309 -107421223 - L1ME3 LINE L1 -23 6139 5865 404 117 0 52 chr5 95664357 95664434 -107421098 - L1MB7 LINE L1 -9 6175 6103 1855 239 29 18 chr5 95664463 95664907 -107420625 - L1M4 LINE L1 -5817 725 277 1754 135 4 0 chr5 95665018 95665263 -107420269 - AluSx SINE Alu -66 246 1 246 250 0 0 chr5 95665499 95665551 -107419981 + L3b LINE CR1 1414 1465 -118 35 41 0 0 chr5 95665552 95665601 -107419931 + AT_rich Low_complexity Low_complexity 1 49 0 203 59 0 29 chr5 95665611 95665645 -107419887 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 7492 28 0 0 chr5 95665645 95666623 -107418909 - L1PA3 LINE L1 -24 6131 5154 10712 27 2 0 chr5 95666623 95667894 -107417638 + L1PA3 LINE L1 3889 5161 -985 198 0 0 0 chr5 95667952 95667974 -107417558 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 381 278 95 8 chr5 95668122 95668248 -107417284 + MIR SINE MIR 21 157 -105 205 279 23 0 chr5 95668258 95668301 -107417231 + L2 LINE L2 3252 3295 -18 2063 89 13 57 chr5 95668656 95668970 -107416562 - AluSq SINE Alu -13 300 1 34 24 0 0 chr5 95670751 95670792 -107414740 + AT_rich Low_complexity Low_complexity 1 41 0 2222 98 0 0 chr5 95670792 95671079 -107414453 + AluSx SINE Alu 2 288 -24 2446 68 0 3 chr5 95671091 95671387 -107414145 + AluY SINE Alu 2 296 -15 6243 155 41 23 chr5 95671387 95673118 -107412414 - L1M2 LINE L1 -530 5767 4021 14856 68 8 0 chr5 95673118 95674969 -107410563 + HERVL LTR ERVL 2465 4329 -1325 4997 156 24 39 chr5 95675069 95676060 -107409472 + MER11C LTR ERVK 96 1071 0 5481 70 0 9 chr5 95676060 95676760 -107408772 + HERVL LTR ERVL 4443 5136 -518 296 250 15 0 chr5 95677012 95677080 -107408452 - L2 LINE L2 0 3272 3204 319 255 81 20 chr5 95677159 95677308 -107408224 + MER103 DNA DNA 2 159 -7 21 36 0 0 chr5 95678323 95678351 -107407181 + AT_rich Low_complexity Low_complexity 1 28 0 13812 132 32 26 chr5 95678361 95680258 -107405274 - Tigger1 DNA MER2_type 0 2418 533 1907 129 0 30 chr5 95680258 95680553 -107404979 + AluSx SINE Alu 1 286 -26 533 42 14 0 chr5 95680553 95680625 -107404907 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 13812 132 32 26 chr5 95680625 95681130 -107404402 - Tigger1 DNA MER2_type -1884 534 1 456 301 54 23 chr5 95681236 95681495 -107404037 + L1MC4a LINE L1 4733 4999 -1147 564 264 35 56 chr5 95681591 95682058 -107403474 - L1ME LINE L1 -660 5502 5036 22 35 0 0 chr5 95682096 95682125 -107403407 + AT_rich Low_complexity Low_complexity 1 29 0 1873 113 92 0 chr5 95682215 95682499 -107403033 - AluSq SINE Alu -3 310 1 959 302 101 7 chr5 95682637 95683064 -107402468 + L1MC4a LINE L1 5404 5870 -1938 914 134 109 40 chr5 95683095 95683297 -107402235 - L1MA9 LINE L1 -49 6263 6048 * 1874 172 118 3 chr5 95683276 95683649 -107401883 + L1MA9 LINE L1 5696 6111 -201 2402 84 0 0 chr5 95683905 95684201 -107401331 + AluY SINE Alu 1 296 -15 30 0 0 0 chr5 95684230 95684260 -107401272 + AT_rich Low_complexity Low_complexity 1 30 0 895 274 20 4 chr5 95685958 95686203 -107399329 - MIR SINE MIR 0 262 14 1851 155 13 10 chr5 95686614 95686923 -107398609 - AluJb SINE Alu 0 312 3 2134 99 13 16 chr5 95687620 95687924 -107397608 - AluSg1 SINE Alu -6 303 1 408 88 0 0 chr5 95688022 95688079 -107397453 + (CA)n Simple_repeat Simple_repeat 2 58 0 28 0 0 0 chr5 95688258 95688286 -107397246 + AT_rich Low_complexity Low_complexity 1 28 0 2430 88 0 0 chr5 95689016 95689323 -107396209 + AluY SINE Alu 1 307 -4 1700 162 3 28 chr5 95690071 95690355 -107395177 - AluJo SINE Alu -34 278 2 192 158 0 0 chr5 95691332 95691370 -107394162 + (TG)n Simple_repeat Simple_repeat 2 39 0 2109 153 26 123 chr5 95691371 95691873 -107393659 + Tigger3b DNA MER2_type 1 453 -778 2663 119 50 205 chr5 95691944 95692152 -107393380 + Tigger3b DNA MER2_type 435 674 -2354 2665 7 0 0 chr5 95692152 95692440 -107393092 + AluYa5 SINE Alu 22 309 -2 2663 119 50 205 chr5 95692440 95692656 -107392876 + Tigger3b DNA MER2_type 674 922 -2106 226 71 24 24 chr5 95692656 95692698 -107392834 + (CTCA)n Simple_repeat Simple_repeat 1 42 0 2663 119 50 205 chr5 95692698 95693214 -107392318 + Tigger3b DNA MER2_type 922 1230 -1 1900 156 41 38 chr5 95693325 95693595 -107391937 + MER47A DNA MER2_type 1 274 -2049 2214 102 3 0 chr5 95693595 95693880 -107391652 - AluSg SINE Alu -24 286 1 1900 156 41 38 chr5 95693880 95693974 -107391558 + MER47A DNA MER2_type 274 366 0 21 36 0 0 chr5 95694631 95694659 -107390873 + AT_rich Low_complexity Low_complexity 1 28 0 2080 125 0 3 chr5 95695473 95695761 -107389771 + AluSx SINE Alu 22 308 -4 541 307 78 0 chr5 95695984 95696176 -107389356 + MIR SINE MIR 41 247 -15 188 214 24 0 chr5 95696428 95696470 -107389062 - L2 LINE L2 -8 3264 3222 966 254 35 113 chr5 95699219 95699794 -107385738 + MLT1H LTR MaLR 20 549 0 41715 63 3 1 chr5 95699992 95706137 -107379395 + L1PA5 LINE L1 1 6154 0 6735 11 0 0 chr5 95706738 95707502 -107378030 - L1PA3 LINE L1 -123 6032 5269 987 26 0 0 chr5 95707503 95707620 -107377912 + L1PA2 LINE L1 6038 6154 -1 21 36 0 0 chr5 95707641 95707669 -107377863 + AT_rich Low_complexity Low_complexity 1 28 0 2223 111 0 13 chr5 95708174 95708489 -107377043 + AluSq SINE Alu 1 311 -2 216 0 0 0 chr5 95708544 95708568 -107376964 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr5 95711172 95711201 -107374331 + AT_rich Low_complexity Low_complexity 1 29 0 43 20 0 0 chr5 95711846 95711896 -107373636 + AT_rich Low_complexity Low_complexity 1 50 0 489 384 59 17 chr5 95712688 95713149 -107372383 + L2 LINE L2 1745 2224 -1090 367 282 137 0 chr5 95713170 95713287 -107372245 + L2 LINE L2 3180 3312 -1 198 400 11 0 chr5 95713288 95713378 -107372154 + L2 LINE L2 2229 2319 -995 393 259 90 30 chr5 95713885 95714051 -107371481 + L2 LINE L2 3124 3299 -14 2380 77 10 7 chr5 95714178 95714488 -107371044 + AluSq SINE Alu 3 313 0 396 0 0 0 chr5 95714488 95714532 -107371000 + (TA)n Simple_repeat Simple_repeat 2 45 0 300 287 115 16 chr5 95715233 95715355 -107370177 - L2 LINE L2 0 3272 3139 788 242 0 0 chr5 95715362 95715515 -107370017 + AluJb SINE Alu 137 289 -23 800 221 13 0 chr5 95716274 95716428 -107369104 - FRAM SINE Alu -20 156 1 265 311 29 19 chr5 95718330 95718433 -107367099 - 7SK RNA RNA -89 104 1 1861 142 18 0 chr5 95718651 95718933 -107366599 + AluSx SINE Alu 1 287 -25 401 291 100 28 chr5 95719473 95719724 -107365808 + L2 LINE L2 3006 3274 -39 425 320 31 8 chr5 95720639 95720767 -107364765 - L2 LINE L2 -4 3268 3138 535 269 71 38 chr5 95720924 95721136 -107364396 - LTR33A LTR ERVL -92 431 213 2872 62 8 3 chr5 95721354 95721728 -107363804 + L1PA5 LINE L1 5776 6151 -3 180 111 0 0 chr5 95721732 95721759 -107363773 + (A)n Simple_repeat Simple_repeat 1 27 0 233 213 85 0 chr5 95721887 95721934 -107363598 + L2 LINE L2 3262 3312 -1 2081 123 0 3 chr5 95722024 95722317 -107363215 + AluSp SINE Alu 3 294 -19 257 289 72 47 chr5 95723835 95723986 -107361546 + MIR SINE MIR 2 162 -46 332 106 0 0 chr5 95724307 95724354 -107361178 + FRAM/FAM SINE Alu 34 80 -95 688 150 23 23 chr5 95724354 95724487 -107361045 - AluJo SINE Alu -55 257 125 425 270 45 56 chr5 95724530 95724708 -107360824 + MER5A DNA MER1_type 4 179 -10 878 198 11 32 chr5 95725232 95725327 -107360205 + MER5A DNA MER1_type 1 92 -97 1648 151 86 38 chr5 95725327 95725699 -107359833 - MLT1B LTR MaLR 0 390 1 878 198 11 32 chr5 95725699 95725790 -107359742 + MER5A DNA MER1_type 92 183 -6 2335 104 0 3 chr5 95727002 95727309 -107358223 + AluSg SINE Alu 1 306 -4 240 265 122 31 chr5 95728435 95728533 -107356999 - L2 LINE L2 -15 3257 3151 3505 135 9 7 chr5 95729490 95730039 -107355493 + MER44D DNA MER2_type 1 605 0 1077 138 6 0 chr5 95731309 95731469 -107354063 - AluJb SINE Alu -16 296 136 21 36 0 0 chr5 95731823 95731851 -107353681 + AT_rich Low_complexity Low_complexity 1 28 0 1310 205 51 0 chr5 95733704 95733958 -107351574 + Tigger7 DNA MER2_type 1 267 -2220 2212 91 0 4 chr5 95733965 95734240 -107351292 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr5 95734249 95734276 -107351256 + (CAA)n Simple_repeat Simple_repeat 2 28 0 426 162 0 27 chr5 95734277 95734351 -107351181 + Tigger7 DNA MER2_type 2399 2470 -17 2064 72 0 0 chr5 95734395 95734658 -107350874 - AluY SINE Alu -1 310 48 1943 111 68 37 chr5 95735502 95735853 -107349679 + THE1B LTR MaLR 3 364 0 354 191 29 0 chr5 95735990 95736058 -107349474 + L2 LINE L2 3205 3274 -39 572 284 181 10 chr5 95736084 95736288 -107349244 - MIR SINE MIR -21 241 3 298 215 0 118 chr5 95737137 95737230 -107348302 + L2 LINE L2 3231 3312 -1 1506 307 111 23 chr5 95737354 95738273 -107347259 + L2 LINE L2 2307 3313 0 396 335 56 27 chr5 95739793 95740130 -107345402 + L1MC4a LINE L1 5558 5904 -1904 1888 162 20 0 chr5 95741889 95742192 -107343340 + AluJo SINE Alu 1 309 -3 783 289 65 18 chr5 95742594 95743006 -107342526 + LTR16C LTR ERVL 1 491 0 240 35 0 0 chr5 95745211 95745240 -107340292 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2121 71 0 32 chr5 95745243 95745524 -107340008 - AluSc SINE Alu -37 272 1 23 0 0 29 chr5 95745798 95745816 -107339716 + AT_rich Low_complexity Low_complexity 1 19 -14 4346 112 20 1 chr5 95745816 95746471 -107339061 + L1PA16 LINE L1 5491 6157 -9 23 0 0 29 chr5 95746471 95746486 -107339046 + AT_rich Low_complexity Low_complexity 19 33 0 268 303 91 15 chr5 95746690 95746964 -107338568 - L1ME LINE L1 -301 5820 5526 306 365 81 33 chr5 95747715 95748244 -107337288 - L2 LINE L2 -276 3037 2483 3463 116 36 22 chr5 95748395 95748998 -107336534 - Tigger3(Golem) DNA MER2_type -1 3028 2417 186 71 0 0 chr5 95748998 95749026 -107336506 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 695 167 0 0 chr5 95749026 95749134 -107336398 - FLAM_C SINE Alu -23 120 13 534 164 31 16 chr5 95749134 95749262 -107336270 - Tigger3(Golem) DNA MER2_type -622 2407 2278 472 169 79 0 chr5 95749253 95749342 -107336190 - Tigger3(Golem) DNA MER2_type -2921 108 13 * 5932 110 27 1 chr5 95749342 95750615 -107334917 + L1PA13 LINE L1 4862 6159 -4 2078 142 45 26 chr5 95750779 95751160 -107334372 - MLT1B LTR MaLR 0 390 3 1264 45 0 0 chr5 95751223 95751380 -107334152 + L1PA4 LINE L1 5993 6149 -6 1542 222 3 10 chr5 95751682 95751988 -107333544 + AluJo SINE Alu 1 304 -8 280 340 30 10 chr5 95752855 95752955 -107332577 - MIR SINE MIR -71 137 36 234 91 0 0 chr5 95752960 95752993 -107332539 + (A)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr5 95753278 95753299 -107332233 + AT_rich Low_complexity Low_complexity 1 21 0 203 315 70 28 chr5 95754618 95754761 -107330771 - L2 LINE L2 -2 3311 3163 661 211 5 72 chr5 95754859 95755053 -107330479 + MER58B DNA MER1_type 1 181 -160 973 211 36 14 chr5 95755055 95755278 -107330254 - AluJo SINE Alu -1 311 84 802 193 20 0 chr5 95755280 95755430 -107330102 + MER58B DNA MER1_type 174 326 -15 675 190 0 0 chr5 95756612 95756749 -107328783 + GA-rich Low_complexity Low_complexity 3 139 0 2651 51 0 0 chr5 95757658 95757969 -107327563 - AluY SINE Alu 0 311 1 276 30 0 0 chr5 95758633 95758666 -107326866 + (TC)n Simple_repeat Simple_repeat 1 33 0 2393 93 0 19 chr5 95758911 95759223 -107326309 + AluSx SINE Alu 1 306 -6 13815 135 17 15 chr5 95759427 95760584 -107324948 - L1PA11 LINE L1 0 6489 5336 2228 85 27 3 chr5 95760584 95760879 -107324653 - AluY SINE Alu -9 302 1 13815 135 17 15 chr5 95760879 95762918 -107322614 - L1PA11 LINE L1 -1153 5336 3278 924 191 12 32 chr5 95762920 95763166 -107322366 + L1P LINE L1 1978 2218 -3928 4181 247 19 57 chr5 95763171 95763628 -107321904 - L1PA11 LINE L1 -4128 2333 1860 183 42 0 0 chr5 95763628 95763652 -107321880 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1848 130 26 4 chr5 95763656 95763925 -107321607 - AluSx SINE Alu -37 275 1 4181 247 19 57 chr5 95763925 95765457 -107320075 - L1PA11 LINE L1 -4604 1857 447 2064 93 10 35 chr5 95765457 95765753 -107319779 + AluSc SINE Alu 1 290 -19 983 117 6 17 chr5 95765753 95765932 -107319600 + (TA)n Simple_repeat Simple_repeat 1 177 0 2064 93 10 35 chr5 95765932 95765946 -107319586 + AluSc SINE Alu 290 303 -6 4181 247 19 57 chr5 95765946 95766369 -107319163 - L1PA11 LINE L1 -6014 447 10 1867 163 14 0 chr5 95766485 95766780 -107318752 + AluJb SINE Alu 10 308 -4 24 0 0 0 chr5 95768010 95768034 -107317498 + AT_rich Low_complexity Low_complexity 1 24 0 562 307 53 18 chr5 95768364 95768589 -107316943 + MIR SINE MIR 29 261 -1 281 322 34 25 chr5 95769083 95769201 -107316331 + L2 LINE L2 3194 3312 -1 2027 141 3 0 chr5 95769340 95769631 -107315901 - AluSx SINE Alu -20 292 1 1352 152 101 51 chr5 95772353 95772629 -107312903 + AluSx SINE Alu 1 290 -22 2560 51 3 6 chr5 95773052 95773363 -107312169 - AluY SINE Alu -1 310 1 29 28 0 0 chr5 95773776 95773812 -107311720 + AT_rich Low_complexity Low_complexity 1 36 0 2394 97 7 0 chr5 95773900 95774208 -107311324 - AluSg SINE Alu 0 310 1 21 0 0 0 chr5 95775454 95775475 -107310057 + AT_rich Low_complexity Low_complexity 1 21 0 2042 131 13 13 chr5 95775603 95775915 -107309617 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 95776064 95776088 -107309444 + AT_rich Low_complexity Low_complexity 1 24 0 538 325 15 10 chr5 95776418 95776615 -107308917 - LTR33 LTR ERVL -321 200 3 356 342 40 33 chr5 95776760 95776912 -107308620 - L2 LINE L2 -8 3264 3112 369 276 89 24 chr5 95776921 95777044 -107308488 + L2 LINE L2 3181 3311 -2 21 57 0 0 chr5 95777363 95777398 -107308134 + AT_rich Low_complexity Low_complexity 1 35 0 2372 80 7 0 chr5 95777542 95777844 -107307688 - AluY SINE Alu -7 304 1 330 234 131 0 chr5 95778225 95778332 -107307200 + L1M LINE L1 5269 5389 -781 639 209 72 32 chr5 95778534 95778812 -107306720 + L1MC5 LINE L1 7619 7907 -54 379 274 154 39 chr5 95779736 95779972 -107305560 - MIR SINE MIR 0 262 4 257 286 33 44 chr5 95780210 95780301 -107305231 - MIR3 SINE MIR 0 208 119 2159 84 0 40 chr5 95781042 95781341 -107304191 + AluSc SINE Alu 7 293 -16 2334 91 0 0 chr5 95781524 95781820 -107303712 - AluSg1 SINE Alu -13 296 1 33 94 0 0 chr5 95783112 95783208 -107302324 + AT_rich Low_complexity Low_complexity 1 96 0 33 20 0 20 chr5 95783899 95783921 -107301611 + AT_rich Low_complexity Low_complexity 1 22 -28 2112 99 21 0 chr5 95783921 95784203 -107301329 + AluSx SINE Alu 1 288 -24 33 20 0 20 chr5 95784203 95784231 -107301301 + AT_rich Low_complexity Low_complexity 22 50 0 1791 117 3 91 chr5 95785600 95785928 -107299604 - AluSx SINE Alu 0 301 1 21 36 0 0 chr5 95786203 95786231 -107299301 + AT_rich Low_complexity Low_complexity 1 28 0 1060 294 42 28 chr5 95787180 95787607 -107297925 + L2 LINE L2 2783 3218 -95 701 229 110 78 chr5 95787668 95788248 -107297284 - L1MC5 LINE L1 -71 7890 7292 346 233 113 31 chr5 95788215 95788374 -107297158 - L1MC4 LINE L1 -547 7495 7324 * 2027 139 0 10 chr5 95788738 95789033 -107296499 - AluSx SINE Alu -20 292 1 1727 275 125 47 chr5 95789040 95790021 -107295511 - L1MC4a LINE L1 -884 6924 5824 2124 114 3 23 chr5 95790021 95790329 -107295203 + AluY SINE Alu 1 302 -9 1727 275 125 47 chr5 95790329 95790592 -107294940 - L1MC4a LINE L1 -1984 5824 5583 3239 169 52 19 chr5 95791445 95792119 -107293413 + LTR28 LTR ERV1 1 636 0 669 261 79 56 chr5 95792354 95792569 -107292963 + MLT1F LTR MaLR 3 222 -320 1947 146 0 0 chr5 95792884 95793190 -107292342 - AluSg SINE Alu 0 306 1 278 298 92 0 chr5 95793256 95793397 -107292135 + L1ME4a LINE L1 3808 3961 -2185 473 229 6 0 chr5 95793454 95793611 -107291921 + (TA)n Simple_repeat Simple_repeat 2 159 0 319 353 0 0 chr5 95793624 95793757 -107291775 + L1ME4a LINE L1 4029 4161 -1985 659 292 70 59 chr5 95793830 95794573 -107290959 + L1ME4a LINE L1 4185 4935 -1211 1449 189 34 4 chr5 95794661 95794925 -107290607 + AluJo SINE Alu 3 274 -38 315 191 0 0 chr5 95794926 95794989 -107290543 + GA-rich Low_complexity Low_complexity 3 65 0 1680 132 37 112 chr5 95795156 95795471 -107290061 + THE1C LTR MaLR 1 281 -94 800 169 0 22 chr5 95795471 95795607 -107289925 + FLAM_C SINE Alu 1 133 0 1680 132 37 112 chr5 95795607 95795694 -107289838 + THE1C LTR MaLR 281 373 -2 246 293 111 11 chr5 95795793 95795974 -107289558 + L1ME4a LINE L1 5280 5478 -684 2023 91 0 4 chr5 95796000 95796264 -107289268 + AluSg SINE Alu 1 263 -47 309 317 21 48 chr5 95796290 95796435 -107289097 + L1ME3A LINE L1 5727 5867 -303 452 305 48 29 chr5 95796679 95796850 -107288682 + MIR SINE MIR 6 180 -82 2302 90 0 0 chr5 95796850 95797138 -107288394 - AluSx SINE Alu -24 288 1 452 305 48 29 chr5 95797138 95797197 -107288335 + MIR SINE MIR 180 236 -26 519 71 35 0 chr5 95797293 95797378 -107288154 + (TG)n Simple_repeat Simple_repeat 1 88 0 207 0 0 0 chr5 95798032 95798055 -107287477 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 200 22 0 chr5 95798184 95798229 -107287303 + MIR SINE MIR 108 153 -109 801 256 45 138 chr5 95798499 95799034 -107286498 - L2 LINE L2 0 3313 2829 200 269 19 0 chr5 95799519 95799571 -107285961 - MIR3 SINE MIR -48 160 108 731 237 30 50 chr5 95800872 95801172 -107284360 + L1ME4a LINE L1 5507 5800 -321 367 232 0 30 chr5 95801267 95801366 -107284166 + L1ME4a LINE L1 5969 6064 -57 490 278 174 9 chr5 95801664 95801894 -107283638 + LTR16A1 LTR ERVL 190 457 0 1011 355 64 40 chr5 95802199 95803247 -107282285 + L2 LINE L2 2013 3082 -190 255 336 95 22 chr5 95803378 95803515 -107282017 + L2 LINE L2 3125 3271 -1 275 232 207 12 chr5 95805590 95805672 -107279860 - L2 LINE L2 -1 3271 3174 667 290 126 4 chr5 95806186 95806417 -107279115 - MIR SINE MIR -3 259 1 903 224 29 136 chr5 95806717 95807136 -107278396 - MLT1A2 LTR MaLR 0 374 1 358 283 28 0 chr5 95807860 95807966 -107277566 + MER81 DNA DNA 1 109 -5 583 189 25 8 chr5 95808196 95808318 -107277214 + MER96B DNA MER1_type? 285 408 -9 465 287 134 30 chr5 95808625 95808827 -107276705 + MIR SINE MIR 6 228 -34 2169 94 37 0 chr5 95809105 95809404 -107276128 - AluSg SINE Alu 0 310 1 381 291 113 7 chr5 95810313 95810454 -107275078 - MIR3 SINE MIR -20 188 33 285 319 28 50 chr5 95811028 95811169 -107274363 + L2 LINE L2 2923 3060 -212 756 296 45 29 chr5 95811470 95811784 -107273748 - LTR16C LTR ERVL -93 398 80 249 57 0 0 chr5 95812044 95812079 -107273453 + (TC)n Simple_repeat Simple_repeat 1 35 0 224 30 30 0 chr5 95812079 95812112 -107273420 + (TA)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr5 95812116 95812147 -107273385 + (CA)n Simple_repeat Simple_repeat 2 32 0 1994 133 0 0 chr5 95812327 95812605 -107272927 - AluSx SINE Alu -34 278 1 1862 164 24 3 chr5 95812789 95813087 -107272445 + AluJo SINE Alu 1 304 -8 234 299 69 7 chr5 95813274 95813418 -107272114 - L1M4 LINE L1 -3292 2854 2702 2134 114 0 13 chr5 95813958 95814266 -107271266 + AluSx SINE Alu 1 304 -8 453 195 12 0 chr5 95814415 95814497 -107271035 - AluJ/FLAM SINE Alu -229 83 1 29300 97 4 16 chr5 95814709 95819846 -107265686 - L1PA6 LINE L1 -2 6467 1396 712 96 0 0 chr5 95819827 95819921 -107265611 - L1PA6 LINE L1 -6364 97 4 * 2381 91 0 0 chr5 95820122 95820419 -107265113 - AluSc SINE Alu -12 297 1 1878 147 17 0 chr5 95820967 95821260 -107264272 - AluSx SINE Alu -14 298 1 250 47 31 47 chr5 95821727 95821791 -107263741 + (TAAAAA)n Simple_repeat Simple_repeat 3 65 0 256 240 0 0 chr5 95822140 95822190 -107263342 - L2 LINE L2 0 3313 3264 213 168 56 19 chr5 95822307 95822414 -107263118 + (CATATA)n Simple_repeat Simple_repeat 4 114 0 21 82 0 0 chr5 95822433 95822482 -107263050 + AT_rich Low_complexity Low_complexity 1 49 0 276 65 22 0 chr5 95822595 95822641 -107262891 - L1PB2 LINE L1 -2 6149 6103 262 200 0 0 chr5 95822641 95822686 -107262846 - U2 snRNA snRNA -143 45 1 5746 148 16 6 chr5 95822688 95824523 -107261009 - L1PB2 LINE L1 -47 6104 4254 22 0 0 0 chr5 95824615 95824637 -107260895 + AT_rich Low_complexity Low_complexity 1 22 0 537 246 25 0 chr5 95824668 95824786 -107260746 - L2 LINE L2 -2 3311 3191 485 253 93 31 chr5 95825363 95825525 -107260007 - MIR SINE MIR -1 261 90 26 30 0 0 chr5 95825946 95825979 -107259553 + AT_rich Low_complexity Low_complexity 1 33 0 309 360 9 0 chr5 95827371 95827482 -107258050 - MIR3 SINE MIR -27 181 70 250 233 121 0 chr5 95827529 95827645 -107257887 + MER113 DNA MER1_type? 1 130 -391 11848 113 14 61 chr5 95827663 95833896 -107251636 - L1PA7 LINE L1 -11 6143 13 918 208 87 82 chr5 95833913 95834292 -107251240 + MER113 DNA MER1_type? 141 521 0 21 40 0 40 chr5 95834346 95834377 -107251155 + AT_rich Low_complexity Low_complexity 1 31 -17 2249 74 3 20 chr5 95834377 95834673 -107250859 + AluY SINE Alu 1 291 -20 21 40 0 40 chr5 95834673 95834691 -107250841 + AT_rich Low_complexity Low_complexity 31 48 0 846 228 147 54 chr5 95835201 95835535 -107249997 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr5 95835713 95835734 -107249798 + AT_rich Low_complexity Low_complexity 1 21 0 347 318 75 40 chr5 95835774 95835947 -107249585 + MIR SINE MIR 20 198 -64 2329 81 0 53 chr5 95836181 95836367 -107249165 - AluSx SINE Alu -6 306 143 2159 110 3 0 chr5 95836367 95836666 -107248866 - AluSg SINE Alu -10 300 1 2329 81 0 53 chr5 95836666 95836800 -107248732 - AluSx SINE Alu -169 143 3 2295 90 6 13 chr5 95837074 95837386 -107248146 + AluSg SINE Alu 1 310 0 219 36 0 0 chr5 95837434 95837462 -107248070 + (TG)n Simple_repeat Simple_repeat 2 29 0 244 293 10 50 chr5 95837795 95837894 -107247638 + MER5A DNA MER1_type 2 96 -93 410 218 14 92 chr5 95837894 95838036 -107247496 + MLT1D LTR MaLR 1 131 -495 751 145 24 0 chr5 95838037 95838161 -107247371 + AluJb SINE Alu 1 127 -185 1578 185 51 24 chr5 95838167 95838541 -107246991 + MLT1D LTR MaLR 116 501 -4 228 341 11 11 chr5 95838553 95838644 -107246888 + MER5A DNA MER1_type 99 189 0 2117 113 3 3 chr5 95839412 95839705 -107245827 - AluSx SINE Alu -15 297 5 1169 190 54 16 chr5 95839737 95839995 -107245537 + L1MC3 LINE L1 6530 6797 -988 1337 249 69 48 chr5 95839996 95840114 -107245418 + MLT1D LTR MaLR 1 115 -390 693 221 0 0 chr5 95840114 95840241 -107245291 - FLAM_C SINE Alu -5 128 2 1337 249 69 48 chr5 95840241 95840446 -107245086 + MLT1D LTR MaLR 115 232 -273 1605 144 40 25 chr5 95840446 95840723 -107244809 + AluJb SINE Alu 11 291 -21 1337 249 69 48 chr5 95840723 95841003 -107244529 + MLT1D LTR MaLR 232 505 0 3346 162 128 94 chr5 95841003 95841289 -107244243 + L1MC3 LINE L1 6794 7069 -716 302 287 11 0 chr5 95841289 95841376 -107244156 + MLT1F1 LTR MaLR 35 122 -445 3346 162 128 94 chr5 95841376 95841961 -107243571 + L1MC3 LINE L1 7069 7784 -1 1347 205 16 69 chr5 95842500 95842876 -107242656 + MLT1A2 LTR MaLR 19 374 0 2062 320 202 38 chr5 95842952 95844690 -107240842 - L2 LINE L2 -1 3312 1075 1755 167 3 58 chr5 95844690 95845019 -107240513 - AluJo SINE Alu 0 312 2 2062 320 202 38 chr5 95845019 95845632 -107239900 - L2 LINE L2 -2238 1075 564 438 107 33 16 chr5 95845715 95845836 -107239696 + (TA)n Simple_repeat Simple_repeat 2 124 0 1463 270 79 7 chr5 95846067 95846637 -107238895 - Charlie7 DNA MER1_type -278 2334 1724 528 204 0 28 chr5 95846645 95846753 -107238779 - AluJb SINE Alu -18 294 190 274 178 0 0 chr5 95846753 95846798 -107238734 - AluJb SINE Alu -68 234 190 1431 197 0 0 chr5 95846798 95847032 -107238500 - AluJb SINE Alu -78 234 1 2093 192 69 69 chr5 95847391 95847426 -107238106 - MLT2B1 LTR ERVL 0 520 486 606 51 13 0 chr5 95847426 95847504 -107238028 + MADE1 DNA Mariner 1 79 -1 2093 192 69 69 chr5 95847504 95847639 -107237893 - MLT2B1 LTR ERVL -34 486 352 4349 207 26 7 chr5 95847639 95848485 -107237047 + MER21B LTR ERV1 1 862 -1 2093 192 69 69 chr5 95848485 95848833 -107236699 - MLT2B1 LTR ERVL -167 353 1 234 298 12 0 chr5 95849127 95849211 -107236321 - Charlie7 DNA MER1_type -1030 1582 1498 3424 145 39 7 chr5 95849232 95849817 -107235715 + MER6A DNA MER2_type 1 604 -1 430 301 72 34 chr5 95849828 95850037 -107235495 - Charlie7 DNA MER1_type -2274 338 122 1532 56 31 0 chr5 95850519 95850715 -107234817 + L1PB1 LINE L1 5947 6148 -3 22 35 0 0 chr5 95850843 95850872 -107234660 + AT_rich Low_complexity Low_complexity 1 29 0 645 172 30 0 chr5 95851154 95851288 -107234244 + L1 LINE L1 3667 3804 -2342 397 197 22 78 chr5 95851288 95851463 -107234069 - FLAM SINE Alu -24 109 47 3210 189 43 4 chr5 95851470 95852410 -107233122 + L1 LINE L1 3795 4800 -1346 649 266 100 26 chr5 95852635 95852837 -107232695 - L1P5 LINE L1 -720 5434 5248 1517 161 93 62 chr5 95852837 95853191 -107232341 + MLT1A1 LTR MaLR 1 365 0 649 266 100 26 chr5 95853191 95853587 -107231945 - L1P5 LINE L1 -906 5248 4789 255 276 123 12 chr5 95853809 95853972 -107231560 - L1M4 LINE L1 -1905 4241 4061 291 329 91 31 chr5 95853992 95854378 -107231154 - L1M4 LINE L1 -2328 3818 3410 21 57 0 0 chr5 95854576 95854611 -107230921 + AT_rich Low_complexity Low_complexity 1 35 0 538 151 0 0 chr5 95854830 95854916 -107230616 - AluJ/FLAM SINE Alu -226 86 1 22 0 0 0 chr5 95854916 95854938 -107230594 + AT_rich Low_complexity Low_complexity 1 22 0 34 55 0 0 chr5 95855034 95855089 -107230443 + AT_rich Low_complexity Low_complexity 1 55 0 469 278 52 29 chr5 95855604 95855777 -107229755 - MLT1J2 LTR MaLR -271 179 3 4657 185 18 1 chr5 95855922 95856742 -107228790 - MER6 DNA MER2_type 0 865 32 1739 184 3 0 chr5 95856789 95857071 -107228461 - AluSx SINE Alu -29 283 1 252 229 28 37 chr5 95857082 95857191 -107228341 - L1M4 LINE L1 -3891 2255 2148 320 149 0 0 chr5 95857684 95857731 -107227801 + AluS SINE Alu 14 60 -243 599 268 19 57 chr5 95857736 95857945 -107227587 - MLT1J1 LTR MaLR -42 404 204 351 155 0 17 chr5 95857956 95858014 -107227518 - L1MC4a LINE L1 -440 7368 7312 * 1367 191 90 116 chr5 95858011 95858544 -107226988 + L1MC4a LINE L1 7290 7808 0 638 270 84 72 chr5 95859364 95859723 -107225809 - MLT1J1 LTR MaLR -3 443 81 241 274 155 0 chr5 95859767 95859851 -107225681 - MLT1J1 LTR MaLR -347 99 3 183 100 0 0 chr5 95860316 95860346 -107225186 + (TG)n Simple_repeat Simple_repeat 1 30 0 2012 145 10 7 chr5 95860360 95860670 -107224862 - AluSx SINE Alu -1 311 1 358 313 69 12 chr5 95860962 95861122 -107224410 + MIR SINE MIR 24 192 -70 185 195 0 49 chr5 95862035 95862076 -107223456 + L3b LINE CR1 1538 1576 -7 235 241 157 24 chr5 95862321 95862404 -107223128 + L2 LINE L2 3186 3279 -34 2726 176 65 32 chr5 95862423 95863018 -107222514 + MLT1E3 LTR MaLR 8 622 -2 2282 113 0 0 chr5 95863024 95863333 -107222199 + AluSg SINE Alu 2 310 0 182 206 0 0 chr5 95863341 95863375 -107222157 + L2 LINE L2 3267 3300 -13 210 37 0 0 chr5 95863376 95863403 -107222129 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 95863555 95863583 -107221949 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 95864383 95864403 -107221129 + (A)n Simple_repeat Simple_repeat 1 20 0 509 113 0 0 chr5 95864403 95864474 -107221058 + FLAM_A SINE Alu 56 126 -16 2055 240 60 45 chr5 95864493 95864649 -107220883 + L1ME3A LINE L1 5485 5637 -533 1624 176 10 41 chr5 95864649 95864944 -107220588 - AluJb SINE Alu -24 288 3 2055 240 60 45 chr5 95864944 95865437 -107220095 + L1ME3A LINE L1 5637 6144 -26 384 88 0 0 chr5 95865658 95865715 -107219817 + (CA)n Simple_repeat Simple_repeat 1 57 0 342 98 0 0 chr5 95865867 95865918 -107219614 + (CA)n Simple_repeat Simple_repeat 1 51 0 229 217 0 0 chr5 95866294 95866340 -107219192 - MLT1E3 LTR MaLR 0 624 579 26 50 0 0 chr5 95866422 95866462 -107219070 + AT_rich Low_complexity Low_complexity 1 40 0 1115 114 9 91 chr5 95866462 95866682 -107218850 - L1PA10 LINE L1 -4 6164 5963 2824 171 288 11 chr5 95866707 95866946 -107218586 - MER52A LTR ERV1 0 1278 1106 1722 74 4 29 chr5 95866946 95867189 -107218343 - AluSg/x SINE Alu -6 306 70 2824 171 288 11 chr5 95867189 95867950 -107217582 - MER52A LTR ERV1 -172 1106 44 2026 113 0 23 chr5 95868236 95868537 -107216995 - AluY SINE Alu -17 294 1 2290 74 20 7 chr5 95868539 95868835 -107216697 - AluSg SINE Alu -10 300 1 21 0 0 0 chr5 95869007 95869028 -107216504 + AT_rich Low_complexity Low_complexity 1 21 0 190 321 49 0 chr5 95869492 95869573 -107215959 - MIR SINE MIR -1 261 177 1011 274 125 20 chr5 95869621 95870124 -107215408 + L1MEd LINE L1 1 556 -5563 435 265 139 5 chr5 95870247 95870462 -107215070 - L1MEc LINE L1 -3746 2469 2226 * 811 292 80 30 chr5 95870455 95870818 -107214714 - L1MEc LINE L1 -5979 417 37 716 238 72 50 chr5 95870827 95871146 -107214386 + L1MEd LINE L1 622 947 -5172 2155 117 7 0 chr5 95872927 95873218 -107212314 + AluSx SINE Alu 5 297 -15 692 96 37 28 chr5 95873218 95873737 -107211795 + (TA)n Simple_repeat Simple_repeat 1 523 0 560 37 110 6 chr5 95873751 95873914 -107211618 + (TA)n Simple_repeat Simple_repeat 1 180 0 714 51 51 34 chr5 95873928 95874105 -107211427 + (TA)n Simple_repeat Simple_repeat 1 180 0 1147 99 0 0 chr5 95874865 95875016 -107210516 - AluSc SINE Alu -1 308 158 23 0 0 0 chr5 95875100 95875123 -107210409 + AT_rich Low_complexity Low_complexity 1 23 0 42 36 0 0 chr5 95875237 95875293 -107210239 + AT_rich Low_complexity Low_complexity 1 56 0 2360 97 3 0 chr5 95875440 95875750 -107209782 + AluSp SINE Alu 1 311 -2 390 229 56 69 chr5 95876208 95876352 -107209180 - MIR SINE MIR -120 142 1 281 261 0 81 chr5 95876476 95876587 -107208945 + L2 LINE L2 3156 3257 -56 191 269 128 26 chr5 95877018 95877096 -107208436 + MIR SINE MIR 131 216 -46 1603 151 0 76 chr5 95877314 95877501 -107208031 - AluJo SINE Alu -15 297 142 2077 123 7 0 chr5 95877501 95877786 -107207746 + AluSx SINE Alu 1 287 -25 1603 151 0 76 chr5 95877786 95877915 -107207617 - AluJo SINE Alu -170 142 5 414 203 0 13 chr5 95878026 95878104 -107207428 + Tigger5 DNA MER2_type 2 78 -2245 234 211 18 35 chr5 95878104 95878161 -107207371 - Tigger5 DNA MER2_type -3 2320 2265 * 327 130 19 37 chr5 95878114 95878168 -107207364 + Tigger5 DNA MER2_type 2271 2323 0 1248 299 68 20 chr5 95878226 95878684 -107206848 + LTR16C LTR ERVL 12 491 0 1817 163 7 3 chr5 95878703 95879029 -107206503 - AluJb SINE Alu 0 312 1 34 24 0 0 chr5 95880144 95880185 -107205347 + AT_rich Low_complexity Low_complexity 1 41 0 391 75 0 0 chr5 95880826 95880879 -107204653 - Alu SINE Alu 0 300 248 839 61 0 0 chr5 95880879 95880977 -107204555 - AluY SINE Alu -213 98 1 202 250 0 0 chr5 95882032 95882084 -107203448 + L3 LINE CR1 1444 1495 -82 454 157 307 0 chr5 95882375 95882515 -107203017 - MER5A DNA MER1_type -1 188 6 24 0 0 0 chr5 95883751 95883775 -107201757 + GC_rich Low_complexity Low_complexity 1 24 0 265 254 14 14 chr5 95883802 95883873 -107201659 + CT-rich Low_complexity Low_complexity 3 73 0 226 339 0 18 chr5 95883984 95884096 -107201436 + (CGG)n Simple_repeat Simple_repeat 3 112 0 250 232 0 0 chr5 95884716 95884772 -107200760 + (CTG)n Simple_repeat Simple_repeat 1 56 0 2485 73 0 0 chr5 95935953 95936254 -107149278 + AluSx SINE Alu 1 301 -11 2102 110 4 0 chr5 95936359 95936640 -107148892 - AluSx SINE Alu -30 282 1 333 0 0 0 chr5 95936640 95936677 -107148855 + (T)n Simple_repeat Simple_repeat 1 37 0 2190 82 3 0 chr5 95936951 95937259 -107148273 + AluSp SINE Alu 2 310 0 2039 84 25 50 chr5 95937448 95937769 -107147763 - AluSq SINE Alu 0 313 1 398 130 29 0 chr5 95937770 95937839 -107147693 - L1MC1 LINE L1 -6 6327 6257 1964 114 21 0 chr5 95937865 95938155 -107147377 + AluSq SINE Alu 1 296 -17 783 237 112 43 chr5 95938378 95938610 -107146922 + MIR SINE MIR 2 249 -13 22 56 0 0 chr5 95938744 95938780 -107146752 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 95939306 95939330 -107146202 + AT_rich Low_complexity Low_complexity 1 24 0 560 273 37 90 chr5 95939595 95939679 -107145853 + MER102b DNA MER1_type 33 120 -1308 2287 105 0 0 chr5 95939679 95939985 -107145547 - AluSx SINE Alu 0 312 7 560 273 37 90 chr5 95939985 95940200 -107145332 + MER102b DNA MER1_type 120 316 -25 407 250 71 0 chr5 95941303 95941415 -107144117 - MLT1G1 LTR MaLR 0 595 476 2047 119 24 0 chr5 95941567 95941861 -107143671 - AluSg SINE Alu -9 301 1 255 237 0 17 chr5 95941987 95942046 -107143486 - MLT1F LTR MaLR -437 105 48 251 255 20 0 chr5 95942903 95942954 -107142578 - MIR SINE MIR -113 95 44 26 30 0 0 chr5 95942983 95943016 -107142516 + AT_rich Low_complexity Low_complexity 1 33 0 292 298 190 8 chr5 95943038 95943159 -107142373 - MIR SINE MIR -9 253 111 1458 213 47 14 chr5 95943306 95943667 -107141865 + MLT1B LTR MaLR 18 390 0 4311 176 49 66 chr5 95944192 95944258 -107141274 - L1MD2 LINE L1 -2 6357 6291 2315 60 30 30 chr5 95944258 95944559 -107140973 + AluY SINE Alu 1 301 -10 4311 176 49 66 chr5 95944559 95944956 -107140576 - L1MD2 LINE L1 -68 6291 5889 1870 161 3 0 chr5 95944956 95945241 -107140291 + AluJo SINE Alu 1 286 -26 4311 176 49 66 chr5 95945241 95945743 -107139789 - L1MD2 LINE L1 -470 5889 5380 1948 196 83 57 chr5 95945743 95946283 -107139249 - MLT2B3 LTR ERVL 0 554 1 4311 176 49 66 chr5 95946283 95946302 -107139230 - L1MD2 LINE L1 -979 5380 5362 2160 134 7 0 chr5 95946302 95946607 -107138925 - AluSx SINE Alu -5 307 1 4311 176 49 66 chr5 95946607 95946717 -107138815 - L1MD2 LINE L1 -997 5362 5278 1184 130 5 0 chr5 95946747 95946931 -107138601 - AluY SINE Alu -8 303 119 1732 163 46 0 chr5 95946931 95947238 -107138294 - L1M3 LINE L1 -367 5816 5496 802 62 0 200 chr5 95947238 95947398 -107138134 - AluSp/q SINE Alu -14 299 172 1069 159 81 37 chr5 95947398 95947568 -107137964 - L1M3 LINE L1 -677 5503 5342 2286 111 0 0 chr5 95947568 95947875 -107137657 - AluSx SINE Alu -5 307 1 1069 159 81 37 chr5 95947875 95948094 -107137438 - L1M3 LINE L1 -838 5342 5099 * 2510 201 98 24 chr5 95948078 95948826 -107136706 - L1MDa LINE L1 -4378 2028 1226 1228 130 89 33 chr5 95948842 95949112 -107136420 - L1MA8 LINE L1 -4 6287 6003 189 94 0 0 chr5 95949125 95949157 -107136375 + (T)n Simple_repeat Simple_repeat 1 32 0 930 175 67 26 chr5 95949160 95949428 -107136104 - L1MDa LINE L1 -5201 1208 930 292 229 110 28 chr5 95949470 95949579 -107135953 - L1ME4a LINE L1 -21 6100 5983 380 246 135 24 chr5 95949638 95949764 -107135768 - MIR SINE MIR -120 142 3 579 206 137 8 chr5 95950084 95950215 -107135317 - MER6B DNA MER2_type -55 155 8 2254 82 0 4 chr5 95951028 95951360 -107134172 - AluSc SINE Alu 0 332 2 2343 109 0 3 chr5 95951601 95951913 -107133619 - AluSx SINE Alu -1 311 1 1760 116 8 11 chr5 95951993 95952261 -107133271 - AluSx SINE Alu -8 304 38 287 239 99 86 chr5 95952398 95952641 -107132891 + MER112 DNA MER1_type 4 249 -11 412 181 0 36 chr5 95952716 95952799 -107132733 + MER112 DNA MER1_type 2 81 -179 287 157 45 22 chr5 95952804 95952893 -107132639 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 515 130 0 71 chr5 95952911 95953095 -107132437 + (TA)n Simple_repeat Simple_repeat 2 172 0 1450 244 233 27 chr5 95953638 95954411 -107131121 - L1MC4 LINE L1 -2 8040 7109 1754 187 7 0 chr5 95954495 95954800 -107130732 - AluJb SINE Alu -5 307 1 4409 172 80 1 chr5 95955234 95956095 -107129437 - L1MC1 LINE L1 -6 6607 5679 1549 177 18 18 chr5 95956140 95956422 -107129110 + AluJb SINE Alu 1 282 -30 1942 143 82 26 chr5 95956436 95956813 -107128719 + MSTB LTR MaLR 29 426 0 9985 198 94 26 chr5 95956815 95959070 -107126462 - L1MC1 LINE L1 -743 5683 3581 1451 218 48 0 chr5 95959070 95959364 -107126168 - 7SLRNA srpRNA srpRNA -12 308 1 9985 198 94 26 chr5 95959364 95960382 -107125150 - L1MC1 LINE L1 -2845 3581 2633 190 70 0 47 chr5 95960382 95960425 -107125107 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1517 178 15 26 chr5 95960429 95960699 -107124833 - AluJb SINE Alu -42 270 4 9985 198 94 26 chr5 95960699 95960713 -107124819 - L1MC1 LINE L1 -3795 2631 2619 2040 146 0 0 chr5 95960713 95961007 -107124525 - AluSx SINE Alu -18 294 1 9985 198 94 26 chr5 95961007 95963002 -107122530 - L1MC1 LINE L1 -3807 2619 41 2548 58 0 13 chr5 95963018 95963330 -107122202 + AluY SINE Alu 1 308 -3 234 268 72 43 chr5 95963829 95963897 -107121635 - MER103 DNA DNA -9 157 92 932 48 81 0 chr5 95963897 95964021 -107121511 - MER85 DNA T2_type -2 137 4 234 268 72 43 chr5 95964021 95964090 -107121442 - MER103 DNA DNA -74 92 16 560 196 0 9 chr5 95964427 95964539 -107120993 - L1MA9 LINE L1 -38 6274 6164 234 0 0 0 chr5 95964539 95964565 -107120967 + (TG)n Simple_repeat Simple_repeat 1 26 0 662 126 0 36 chr5 95964578 95964689 -107120843 - U6 snRNA snRNA 0 107 1 1406 173 3 44 chr5 95964977 95965272 -107120260 + AluJo SINE Alu 1 283 -29 614 212 0 36 chr5 95965275 95965412 -107120120 + FLAM_A SINE Alu 1 132 -1 2248 245 52 50 chr5 95966233 95966488 -107119044 - L1ME3A LINE L1 -6 6233 5980 1116 124 124 0 chr5 95966488 95966697 -107118835 - MER46A DNA MER2_type 0 236 2 2248 245 52 50 chr5 95966697 95967310 -107118222 - L1ME3A LINE L1 -259 5980 5363 535 252 53 65 chr5 95967499 95967745 -107117787 - L1ME3A LINE L1 -18 6152 5910 374 289 64 0 chr5 95967756 95967912 -107117620 - L1ME3A LINE L1 -1035 5180 5015 228 250 59 0 chr5 95967970 95968038 -107117494 - L1ME3A LINE L1 -1300 4915 4844 743 261 171 16 chr5 95968081 95968626 -107116906 - L1ME3A LINE L1 -2839 3376 2748 599 275 98 62 chr5 95968671 95968724 -107116808 - L1ME3A LINE L1 -3716 2499 2449 2106 119 23 3 chr5 95968724 95969027 -107116505 - AluSq SINE Alu -4 309 1 599 275 98 62 chr5 95969027 95969363 -107116169 - L1ME3A LINE L1 -3766 2449 2126 2034 135 3 0 chr5 95969363 95969659 -107115873 - AluSx SINE Alu -15 297 1 599 275 98 62 chr5 95969659 95970095 -107115437 - L1ME3A LINE L1 -4089 2126 1707 5800 102 38 2 chr5 95970095 95971519 -107114013 + L1PA13 LINE L1 4694 6163 0 599 275 98 62 chr5 95971519 95971720 -107113812 - L1ME3A LINE L1 -4508 1707 1259 1639 158 3 34 chr5 95971762 95972060 -107113472 - AluJo SINE Alu -23 289 1 882 48 0 0 chr5 95972252 95972383 -107113149 + AluY SINE Alu 181 311 0 227 239 109 11 chr5 95972562 95972654 -107112878 - L1M4 LINE L1 -2856 3290 3190 250 212 0 30 chr5 95973494 95973560 -107111972 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1599 165 55 0 chr5 95973596 95973869 -107111663 + MER7A DNA MER2_type 58 343 -3 659 274 42 55 chr5 95974021 95974331 -107111201 - L2 LINE L2 0 3313 3008 232 266 168 0 chr5 95974384 95974497 -107111035 - L1MC/D LINE L1 -1980 5828 5697 3569 189 62 63 chr5 95975578 95976288 -107109244 + Charlie1a DNA MER1_type 30 740 -2021 2923 198 34 20 chr5 95976288 95976883 -107108649 - MER77 LTR ERV1 -2 603 1 3569 189 62 63 chr5 95976883 95977109 -107108423 + Charlie1a DNA MER1_type 740 965 -490 1234 203 49 12 chr5 95977123 95977468 -107108064 + Charlie1a DNA MER1_type 1078 1435 -20 246 376 28 93 chr5 95978435 95978775 -107106757 - L2 LINE L2 -27 3245 2933 2378 88 0 16 chr5 95978775 95979092 -107106440 + AluSp SINE Alu 1 312 -1 246 376 28 93 chr5 95979092 95979150 -107106382 - L2 LINE L2 -339 2933 2873 912 171 195 69 chr5 95980056 95980435 -107105097 - MSTC LTR MaLR -1 427 1 2042 142 0 0 chr5 95981774 95982070 -107103462 - AluSx SINE Alu -15 297 2 199 343 27 0 chr5 95982290 95982363 -107103169 + MIR3 SINE MIR 121 195 -13 1957 159 0 0 chr5 95982523 95982824 -107102708 - AluJb SINE Alu -11 301 1 260 247 0 65 chr5 95983070 95983147 -107102385 - L2 LINE L2 -13 3300 3229 1976 141 146 8 chr5 95983255 95983631 -107101901 - MSTA LTR MaLR 0 428 1 9336 133 14 38 chr5 95983635 95985245 -107100287 - MSTA-int LTR MaLR -6 1574 3 1874 152 149 11 chr5 95985247 95985623 -107099909 - MSTA LTR MaLR 0 428 1 1868 180 71 96 chr5 95986103 95986885 -107098647 - MER21A LTR ERV1 0 931 62 1829 146 89 32 chr5 95986885 95987051 -107098481 + MSTB LTR MaLR 1 156 -270 1928 149 6 56 chr5 95987051 95987406 -107098126 + MER1B DNA MER1_type 1 337 0 1829 146 89 32 chr5 95987406 95987608 -107097924 + MSTB LTR MaLR 156 390 -36 363 65 0 0 chr5 95987621 95987667 -107097865 - MER21A LTR ERV1 -865 66 21 259 371 72 19 chr5 95987722 95988043 -107097489 - L2 LINE L2 -837 2477 2140 277 231 0 31 chr5 95988167 95988232 -107097300 + L2 LINE L2 3249 3311 -2 473 371 47 35 chr5 95988609 95988927 -107096605 + L2 LINE L2 2916 3237 -35 222 283 0 0 chr5 95989519 95989565 -107095967 + (CA)n Simple_repeat Simple_repeat 2 47 0 27 0 0 0 chr5 95989830 95989857 -107095675 + AT_rich Low_complexity Low_complexity 1 27 0 2642 84 11 24 chr5 95989869 95990249 -107095283 - THE1C LTR MaLR 0 375 1 1475 206 7 3 chr5 95990863 95991159 -107094373 - AluJb SINE Alu -15 297 1 909 216 83 37 chr5 95991973 95992214 -107093318 - MIR SINE MIR -6 256 5 2128 117 0 7 chr5 95992571 95992871 -107092661 + AluSx SINE Alu 1 298 -14 199 279 59 15 chr5 95992921 95992989 -107092543 + L3 LINE CR1 1503 1573 -4 24 0 0 0 chr5 95993624 95993648 -107091884 + AT_rich Low_complexity Low_complexity 1 24 0 1598 189 10 7 chr5 95994057 95994353 -107091179 + AluJb SINE Alu 6 302 -10 181 333 65 37 chr5 95994788 95994896 -107090636 - MIR3 SINE MIR -44 164 54 237 349 0 0 chr5 95998899 95998965 -107086567 + Charlie1a DNA MER1_type 1 66 -1389 1770 152 118 55 chr5 95998985 95999419 -107086113 - MLT2B1 LTR ERVL -59 461 1 4560 181 109 18 chr5 95999419 95999773 -107085759 + Charlie1a DNA MER1_type 60 380 -2381 1939 157 7 0 chr5 95999773 96000073 -107085459 - AluSx SINE Alu -10 302 1 4560 181 109 18 chr5 96000073 96000311 -107085221 + Charlie1a DNA MER1_type 380 595 -2166 2161 114 7 0 chr5 96000311 96000617 -107084915 - AluSq SINE Alu -5 308 1 4560 181 109 18 chr5 96000617 96001263 -107084269 + Charlie1a DNA MER1_type 595 1441 -14 21 71 0 0 chr5 96001365 96001407 -107084125 + AT_rich Low_complexity Low_complexity 1 42 0 235 377 32 13 chr5 96002625 96002779 -107082753 - MIR SINE MIR -100 162 6 28 29 0 0 chr5 96002819 96002854 -107082678 + AT_rich Low_complexity Low_complexity 1 35 0 1896 133 0 30 chr5 96003232 96003393 -107082139 - AluSx SINE Alu -21 291 142 288 0 0 0 chr5 96003393 96003425 -107082107 + (TA)n Simple_repeat Simple_repeat 1 32 0 1896 133 0 30 chr5 96003425 96003563 -107081969 - AluSx SINE Alu -170 142 1 249 300 100 14 chr5 96004183 96004253 -107081279 - MIR SINE MIR -110 98 23 283 302 107 40 chr5 96004440 96004665 -107080867 + L3 LINE CR1 761 1000 -577 583 198 25 8 chr5 96004898 96005019 -107080513 + L2 LINE L2 3191 3313 0 27 49 0 0 chr5 96006117 96006158 -107079374 + AT_rich Low_complexity Low_complexity 1 41 0 21 71 0 0 chr5 96006224 96006266 -107079266 + AT_rich Low_complexity Low_complexity 1 42 0 2021 151 3 0 chr5 96007039 96007350 -107078182 - AluSx SINE Alu 0 312 1 229 297 0 54 chr5 96007350 96007424 -107078108 - Charlie8 DNA MER1_type -1 2416 2347 351 152 13 51 chr5 96007651 96007730 -107077802 - Charlie8 DNA MER1_type -2215 202 127 21 0 0 0 chr5 96007752 96007773 -107077759 + AT_rich Low_complexity Low_complexity 1 21 0 269 333 87 55 chr5 96008111 96008330 -107077202 + L2 LINE L2 2504 2729 -585 4888 148 54 11 chr5 96008335 96009205 -107076327 + L1MA3 LINE L1 5371 6277 -28 22 0 0 0 chr5 96009236 96009258 -107076274 + AT_rich Low_complexity Low_complexity 1 22 0 1621 162 26 49 chr5 96009402 96009710 -107075822 - AluJo SINE Alu -11 301 1 686 164 7 36 chr5 96009895 96010035 -107075497 - AluJo SINE Alu -176 136 1 311 286 186 19 chr5 96010298 96010459 -107075073 - L3 LINE CR1 -39 1538 1351 578 197 111 0 chr5 96013533 96013650 -107071882 - FLAM_A SINE Alu -3 130 1 13122 139 44 25 chr5 96019114 96021278 -107064254 + Tigger1 DNA MER2_type 1 2218 -200 1460 191 61 0 chr5 96021278 96021556 -107063976 - AluJo SINE Alu -6 306 12 13122 139 44 25 chr5 96021556 96021761 -107063771 + Tigger1 DNA MER2_type 2218 2417 -1 499 237 93 0 chr5 96021784 96021902 -107063630 + L2 LINE L2 3183 3311 -2 222 204 37 0 chr5 96022105 96022159 -107063373 + (TA)n Simple_repeat Simple_repeat 2 57 0 1687 102 0 0 chr5 96022392 96022618 -107062914 + AluY SINE Alu 75 300 -11 497 227 106 7 chr5 96023182 96023323 -107062209 - MIR SINE MIR -11 251 97 * 1107 311 144 19 chr5 96023310 96024070 -107061462 + L2 LINE L2 2440 3306 -7 3171 211 133 61 chr5 96024564 96025019 -107060513 - Looper DNA T2_type -9 1549 1128 2003 102 11 7 chr5 96025019 96025304 -107060228 - AluSq SINE Alu -13 300 15 3171 211 133 61 chr5 96025304 96025985 -107059547 - Looper DNA T2_type -430 1128 286 628 244 150 5 chr5 96025985 96026178 -107059354 - MER58A DNA MER1_type 0 224 4 3171 211 133 61 chr5 96026178 96026477 -107059055 - Looper DNA T2_type -1272 286 10 252 86 0 0 chr5 96027777 96027812 -107057720 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 359 204 159 15 chr5 96029257 96029389 -107056143 + MER103 DNA DNA 7 157 -9 23 0 0 0 chr5 96030587 96030610 -107054922 + AT_rich Low_complexity Low_complexity 1 23 0 1373 176 35 38 chr5 96031639 96031952 -107053580 + AluJo SINE Alu 1 312 0 366 259 228 32 chr5 96032873 96033329 -107052203 - L1ME LINE L1 -4863 1207 676 247 246 53 44 chr5 96033723 96033837 -107051695 - L1ME LINE L1 -5924 146 32 235 226 39 59 chr5 96034276 96034378 -107051154 - L1ME4a LINE L1 -67 6054 5955 22 70 0 0 chr5 96034580 96034623 -107050909 + AT_rich Low_complexity Low_complexity 1 43 0 810 209 15 20 chr5 96035361 96035557 -107049975 + AluJo SINE Alu 94 288 -24 204 118 39 20 chr5 96036815 96036866 -107048666 + (TTA)n Simple_repeat Simple_repeat 3 54 0 1170 189 3 49 chr5 96038083 96038374 -107047158 - MER2 DNA MER2_type -2 343 2 196 274 144 2 chr5 96038380 96038499 -107047033 - MIR SINE MIR -69 139 52 31 0 0 0 chr5 96039020 96039051 -107046481 + AT_rich Low_complexity Low_complexity 1 31 0 33 0 0 0 chr5 96039332 96039365 -107046167 + AT_rich Low_complexity Low_complexity 1 33 0 2223 95 0 0 chr5 96040142 96040427 -107045105 - AluSq SINE Alu -5 308 24 1932 118 14 24 chr5 96042214 96042502 -107043030 - AluSx SINE Alu -6 306 22 2215 119 0 3 chr5 96045322 96045625 -107039907 + AluSx SINE Alu 1 302 -10 1744 156 3 24 chr5 96045635 96045923 -107039609 + AluJo SINE Alu 1 282 -30 261 0 0 0 chr5 96045927 96045956 -107039576 + (CA)n Simple_repeat Simple_repeat 2 30 0 1351 108 6 0 chr5 96047608 96047784 -107037748 - AluSc SINE Alu -132 177 1 772 113 38 38 chr5 96047934 96048067 -107037465 + AluSq/x SINE Alu 1 133 -180 214 293 13 27 chr5 96048152 96048227 -107037305 + MER5B DNA MER1_type 17 90 -88 204 256 26 19 chr5 96048335 96048491 -107037041 + (CAA)n Simple_repeat Simple_repeat 3 159 0 214 121 17 17 chr5 96048525 96048583 -107036949 + A-rich Low_complexity Low_complexity 5 62 0 216 0 0 0 chr5 96050472 96050496 -107035036 + (GA)n Simple_repeat Simple_repeat 1 24 0 222 250 16 45 chr5 96050827 96050963 -107034569 + MIR SINE MIR 47 181 -56 2260 117 7 3 chr5 96051020 96051328 -107034204 - AluSp SINE Alu -4 309 1 962 185 9 28 chr5 96051557 96051773 -107033759 - AluSp SINE Alu -1 312 101 786 254 70 9 chr5 96055912 96056140 -107029392 + MER58B DNA MER1_type 96 337 -4 198 362 43 9 chr5 96056235 96056351 -107029181 - L2 LINE L2 -1 3312 3193 272 293 20 0 chr5 96056930 96057029 -107028503 + MER5B DNA MER1_type 1 101 -77 2356 77 17 3 chr5 96057034 96057332 -107028200 + AluSc SINE Alu 1 302 -7 1086 161 0 52 chr5 96057739 96057931 -107027601 - MLT1C LTR MaLR 0 467 286 377 269 103 51 chr5 96060552 96060786 -107024746 - MIR SINE MIR -9 253 8 264 326 62 16 chr5 96061912 96062041 -107023491 - MLT1I LTR MaLR -175 234 100 1219 168 76 65 chr5 96062658 96062949 -107022583 + AluJo SINE Alu 1 294 -18 2270 101 7 3 chr5 96063149 96063457 -107022075 + AluSx SINE Alu 1 309 -3 1152 194 4 8 chr5 96063458 96063695 -107021837 - L1MB5 LINE L1 -10 6164 5929 361 260 100 64 chr5 96063740 96064021 -107021511 + L2 LINE L2 2355 2645 -669 200 348 13 19 chr5 96064082 96064240 -107021292 + L2 LINE L2 2781 2937 -377 2245 76 0 4 chr5 96065289 96065566 -107019966 + AluY SINE Alu 10 285 -26 4423 116 17 3 chr5 96068844 96069507 -107016025 + L1PB4 LINE L1 5485 6156 0 2403 95 3 3 chr5 96069580 96069886 -107015646 - AluSp SINE Alu -7 306 1 183 129 0 0 chr5 96070997 96071028 -107014504 + (ATGGTG)n Simple_repeat Simple_repeat 2 32 0 388 273 72 0 chr5 96071628 96071767 -107013765 - MIR3 SINE MIR -26 182 34 1674 244 58 50 chr5 96072321 96073026 -107012506 + L1ME3 LINE L1 5333 6043 -119 1317 68 0 12 chr5 96073045 96073207 -107012325 - AluSq SINE Alu -25 288 129 930 259 105 91 chr5 96075010 96075590 -107009942 + L2 LINE L2 1841 2411 -903 2373 108 0 0 chr5 96075590 96075896 -107009636 - AluSg SINE Alu -4 306 1 930 259 105 91 chr5 96075896 96075946 -107009586 + L2 LINE L2 2411 2459 -855 1155 176 25 8 chr5 96075946 96076191 -107009341 - L1MA8 LINE L1 -10 6281 6033 930 259 105 91 chr5 96076191 96076509 -107009023 + L2 LINE L2 2459 2804 -510 262 268 172 14 chr5 96078476 96078685 -107006847 + L1ME LINE L1 5661 5902 -219 2029 109 7 7 chr5 96078883 96079158 -107006374 - AluSq SINE Alu -30 283 9 1896 100 0 16 chr5 96079454 96079705 -107005827 + AluSq SINE Alu 1 247 -66 470 213 71 46 chr5 96080426 96080623 -107004909 - LTR33 LTR ERVL -18 503 302 303 261 109 22 chr5 96080667 96080759 -107004773 - LTR33 LTR ERVL -332 189 90 372 260 0 10 chr5 96080869 96080965 -107004567 - MIR SINE MIR -33 229 135 242 204 9 97 chr5 96082014 96082127 -107003405 - MER112 DNA MER1_type -130 130 28 948 155 12 6 chr5 96082467 96082628 -107002904 - MER46A DNA MER2_type 0 236 75 635 105 0 0 chr5 96082753 96082839 -107002693 + AluJb SINE Alu 211 296 -16 278 182 0 91 chr5 96082841 96082896 -107002636 + MER66A LTR ERV1 288 337 -141 498 265 19 0 chr5 96082988 96083151 -107002381 - L1MB3 LINE L1 -335 5848 5674 575 255 174 4 chr5 96083172 96083431 -107002101 - L1MB3 LINE L1 -1322 4824 4522 601 225 46 46 chr5 96084366 96084387 -107001145 - MER20B DNA MER1_type -36 747 727 2061 87 24 0 chr5 96084387 96084674 -107000858 + AluSx SINE Alu 1 294 -18 601 225 46 46 chr5 96084674 96084892 -107000640 - MER20B DNA MER1_type -55 728 508 2380 120 7 62 chr5 96085303 96085719 -106999813 + MER57A LTR ERV1 1 393 -10 1304 138 5 9 chr5 96085814 96086031 -106999501 + AluSq SINE Alu 3 218 -95 385 312 9 18 chr5 96087892 96088001 -106997531 + L2 LINE L2 3197 3304 -9 221 250 0 59 chr5 96088628 96088696 -106996836 - MIR3 SINE MIR -6 202 139 1007 120 43 82 chr5 96089272 96089505 -106996027 + AluJo SINE Alu 85 308 -4 2088 100 40 10 chr5 96089506 96089841 -106995691 + AluSx SINE Alu 2 345 0 1451 74 0 11 chr5 96090369 96090558 -106994974 + AluSq SINE Alu 1 187 -126 201 171 0 0 chr5 96091133 96091168 -106994364 + A-rich Low_complexity Low_complexity 1 35 0 559 219 39 32 chr5 96092829 96092984 -106992548 - L2 LINE L2 0 3313 3158 1173 145 79 26 chr5 96093877 96094105 -106991427 - L1MB7 LINE L1 -16 6168 5929 1457 178 38 115 chr5 96094559 96095064 -106990468 + LTR37B LTR ERV1 1 466 -2 290 259 12 12 chr5 96095306 96095387 -106990145 + MIR SINE MIR 117 197 -65 208 295 98 0 chr5 96095445 96095506 -106990026 + MIR SINE MIR 27 93 -115 245 345 9 18 chr5 96096007 96096120 -106989412 - HAL1 LINE L1 -14 2493 2382 237 118 0 0 chr5 96096363 96096397 -106989135 - L1ME LINE L1 -469 5652 5619 1143 209 72 58 chr5 96096781 96097158 -106988374 - L1PB4 LINE L1 -1 6155 5774 2316 145 75 70 chr5 96098701 96099218 -106986314 - LTR8A LTR ERV1 -46 681 162 1796 111 0 86 chr5 96099218 96099543 -106985989 - AluSp SINE Alu -16 297 1 339 215 54 46 chr5 96100042 96100172 -106985360 - L1MC5 LINE L1 -48 7913 7783 803 156 0 0 chr5 96100191 96100313 -106985219 - AluSp/q SINE Alu -16 297 176 2177 92 0 3 chr5 96100852 96101147 -106984385 - AluY SINE Alu -17 294 1 854 287 134 19 chr5 96101161 96101743 -106983789 + L1 LINE L1 2379 3027 -3119 201 121 0 0 chr5 96102611 96102644 -106982888 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 217 43 33 chr5 96102658 96102750 -106982782 + L1 LINE L1 5188 5280 -866 * 713 206 95 37 chr5 96102728 96102971 -106982561 + L1MC4a LINE L1 5259 5515 -2293 2251 91 3 0 chr5 96102993 96103302 -106982230 - AluSp SINE Alu -1 312 3 30 27 0 0 chr5 96103359 96103396 -106982136 + AT_rich Low_complexity Low_complexity 1 37 0 243 268 0 0 chr5 96103430 96103486 -106982046 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 306 262 119 32 chr5 96103546 96103672 -106981860 + L1MC4a LINE L1 6042 6178 -1630 335 264 111 46 chr5 96103938 96104154 -106981378 + L1 LINE L1 3118 3347 -2799 1689 162 0 38 chr5 96104387 96104701 -106980831 + AluJb SINE Alu 1 302 -10 1823 129 0 11 chr5 96104702 96104980 -106980552 + AluSc SINE Alu 3 277 -32 1349 240 21 30 chr5 96105014 96105351 -106980181 - MLT1C LTR MaLR -52 415 82 1708 151 4 0 chr5 96105352 96105624 -106979908 + AluJb SINE Alu 1 273 -39 386 152 56 16 chr5 96105624 96105749 -106979783 + GA-rich Low_complexity Low_complexity 1 130 0 672 212 182 36 chr5 96105756 96106063 -106979469 + L1MC5 LINE L1 7474 7825 -136 785 167 90 7 chr5 96106073 96106217 -106979315 + AluJo SINE Alu 5 160 -152 1089 241 108 7 chr5 96106318 96106596 -106978936 + MER21B LTR ERV1 361 666 -197 2210 110 0 0 chr5 96106671 96106972 -106978560 - AluSx SINE Alu -11 301 1 345 252 110 81 chr5 96107011 96107257 -106978275 + LTR38 LTR ERV1 96 348 -208 2105 121 0 6 chr5 96107260 96107573 -106977959 + AluSx SINE Alu 1 311 -1 321 199 63 0 chr5 96107698 96107783 -106977749 - AluJb SINE Alu -78 224 157 819 102 16 0 chr5 96107896 96108023 -106977509 + AluSp/q SINE Alu 185 313 0 2117 97 0 0 chr5 96109001 96109280 -106976252 + AluSg SINE Alu 1 279 -31 1871 84 15 0 chr5 96109674 96109937 -106975595 - AluSc SINE Alu -14 295 29 827 198 37 0 chr5 96110561 96110748 -106974784 - L1MB3 LINE L1 0 6183 5990 720 176 0 17 chr5 96111369 96111488 -106974044 + FLAM_A SINE Alu 11 127 -15 222 62 0 0 chr5 96112427 96112459 -106973073 + (CAA)n Simple_repeat Simple_repeat 2 33 0 342 0 0 0 chr5 96113633 96113671 -106971861 + (TA)n Simple_repeat Simple_repeat 2 39 0 1204 168 5 0 chr5 96113676 96113878 -106971654 - AluJb SINE Alu -33 279 77 1965 125 10 3 chr5 96115631 96115928 -106969604 + AluSx SINE Alu 1 299 -13 278 265 81 64 chr5 96116290 96116522 -106969010 - MIR SINE MIR -25 237 8 2266 73 10 3 chr5 96116868 96117169 -106968363 - AluSg SINE Alu -7 303 1 838 133 0 67 chr5 96117174 96117309 -106968223 - FLAM_C SINE Alu -7 126 1 488 259 76 38 chr5 96117936 96118172 -106967360 + L1MC4a LINE L1 5724 5968 -1840 1426 183 67 14 chr5 96118280 96118565 -106966967 - AluJo SINE Alu -2 300 1 2101 113 0 0 chr5 96118622 96118922 -106966610 + AluSq SINE Alu 1 300 -13 340 253 118 38 chr5 96118941 96119237 -106966295 + L1MC4a LINE L1 5684 6004 -117 2283 87 0 3 chr5 96119385 96119695 -106965837 + AluY SINE Alu 1 309 -2 610 168 109 25 chr5 96120197 96120346 -106965186 + FLAM_C SINE Alu 5 163 0 1516 199 7 10 chr5 96120868 96121174 -106964358 + AluJb SINE Alu 1 305 -7 427 230 28 0 chr5 96121409 96121533 -106963999 + L1MC4a LINE L1 5726 5858 -263 26 30 0 0 chr5 96121550 96121583 -106963949 + AT_rich Low_complexity Low_complexity 1 33 0 234 105 0 0 chr5 96121583 96121621 -106963911 + (TG)n Simple_repeat Simple_repeat 2 39 0 454 189 168 0 chr5 96121625 96121720 -106963812 + MIR SINE MIR 36 146 -116 1848 143 7 0 chr5 96121723 96122003 -106963529 + AluJo SINE Alu 1 282 -30 299 329 98 7 chr5 96123397 96123540 -106961992 - MIR SINE MIR -30 232 77 196 200 0 0 chr5 96123757 96123787 -106961745 - L2 LINE L2 -16 3256 3227 237 211 18 18 chr5 96124323 96124380 -106961152 + MIR SINE MIR 200 256 -6 246 62 0 0 chr5 96124441 96124473 -106961059 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 212 385 0 0 chr5 96124475 96124540 -106960992 - L2 LINE L2 -14 3299 3235 311 247 86 0 chr5 96124590 96124683 -106960849 + MIR3 SINE MIR 56 156 -52 3182 191 19 0 chr5 96125635 96126262 -106959270 - L1 LINE L1 -1554 4592 3954 1730 138 3 70 chr5 96126421 96126748 -106958784 + AluSx SINE Alu 8 312 0 456 67 0 0 chr5 96126921 96126981 -106958551 + (GGAAA)n Simple_repeat Simple_repeat 3 62 0 1804 194 77 0 chr5 96126981 96127373 -106958159 + MST-int LTR MaLR 221 642 -1009 501 259 6 58 chr5 96128158 96128332 -106957200 + MIR SINE MIR 79 243 -19 262 313 40 27 chr5 96128411 96128561 -106956971 - L1ME LINE L1 -414 5707 5556 396 292 76 0 chr5 96128878 96129022 -106956510 + MIR SINE MIR 38 192 -70 231 284 55 89 chr5 96129333 96129482 -106956050 + MIR SINE MIR 48 191 -43 483 281 38 32 chr5 96129651 96129836 -106955696 + MIR SINE MIR 69 254 -8 187 360 0 0 chr5 96129892 96129978 -106955554 + MIR SINE MIR 56 141 -121 2501 40 0 0 chr5 96130098 96130397 -106955135 + AluY SINE Alu 1 299 -12 194 244 96 87 chr5 96130664 96130893 -106954639 + L2 LINE L2 2834 3064 -208 560 284 36 22 chr5 96131051 96131273 -106954259 + LTR16C LTR ERVL 267 491 0 2136 86 17 7 chr5 96131313 96131603 -106953929 + AluSg SINE Alu 1 293 -17 220 229 0 0 chr5 96132197 96132245 -106953287 + (TA)n Simple_repeat Simple_repeat 2 49 0 688 261 62 92 chr5 96133252 96133688 -106951844 + MLT1J LTR MaLR 70 492 -19 363 23 0 0 chr5 96134414 96134458 -106951074 + (CA)n Simple_repeat Simple_repeat 2 45 0 383 235 147 0 chr5 96135069 96135205 -106950327 + MER5A DNA MER1_type 32 187 -2 1685 72 136 0 chr5 96136726 96136991 -106948541 + LTR66 LTR ERVL 310 610 0 596 204 0 0 chr5 96136991 96137089 -106948443 - AluJ/FLAM SINE Alu -214 98 1 2287 109 0 3 chr5 96137339 96137643 -106947889 - AluSx SINE Alu -9 303 1 261 313 78 48 chr5 96140497 96140663 -106944869 - MIR3 SINE MIR -9 199 29 1935 132 10 7 chr5 96141317 96141605 -106943927 - AluSx SINE Alu -23 289 1 180 111 0 0 chr5 96141715 96141742 -106943790 + (A)n Simple_repeat Simple_repeat 1 27 0 190 250 0 0 chr5 96141752 96141788 -106943744 + MIR SINE MIR 32 67 -141 308 195 12 37 chr5 96141888 96141970 -106943562 - MER116 DNA Mariner 0 80 1 399 293 76 118 chr5 96142836 96143454 -106942078 + L1M2 LINE L1 757 1348 -5501 212 356 84 21 chr5 96144038 96144229 -106941303 + L2 LINE L2 2472 2674 -640 343 282 111 34 chr5 96144714 96144905 -106940627 - MIR SINE MIR -48 214 8 378 310 21 78 chr5 96144921 96145063 -106940469 - L2 LINE L2 -1 3271 3138 180 111 0 0 chr5 96145106 96145133 -106940399 + (A)n Simple_repeat Simple_repeat 1 27 0 22 35 0 0 chr5 96145581 96145610 -106939922 + AT_rich Low_complexity Low_complexity 1 29 0 2003 131 3 3 chr5 96145637 96145966 -106939566 - pTR5 LTR ERV1 -2044 394 66 280 245 31 20 chr5 96145966 96146064 -106939468 - LTR30 LTR ERV1 -80 642 544 4408 149 62 39 chr5 96146064 96147150 -106938382 - pTR5 LTR ERV1 -413 2025 745 1650 120 4 66 chr5 96147150 96147264 -106938268 - AluSx SINE Alu -66 246 127 417 39 0 0 chr5 96147264 96147315 -106938217 + (TG)n Simple_repeat Simple_repeat 2 52 0 2333 63 0 17 chr5 96147325 96147626 -106937906 - AluY SINE Alu -15 296 1 1650 120 4 66 chr5 96147626 96147759 -106937773 - AluSx SINE Alu -194 118 4 743 288 37 8 chr5 96147934 96148177 -106937355 - MIR SINE MIR 0 262 13 1891 124 4 14 chr5 96149322 96149597 -106935935 + AluSx SINE Alu 5 276 -36 22 0 0 0 chr5 96150129 96150151 -106935381 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 96151223 96151253 -106934279 + AT_rich Low_complexity Low_complexity 1 30 0 332 123 231 0 chr5 96153155 96153220 -106932312 - MADE1 DNA Mariner 0 80 1 270 359 47 75 chr5 96154452 96154664 -106930868 + L2 LINE L2 2999 3204 -68 1018 133 205 0 chr5 96154846 96155041 -106930491 + MER46A DNA MER2_type 1 235 -1 1466 74 0 0 chr5 96155736 96155912 -106929620 + AluSq SINE Alu 129 304 -9 196 370 11 11 chr5 96156216 96156308 -106929224 + L3 LINE CR1 753 844 -733 273 299 0 94 chr5 96156506 96156623 -106928909 - MER5A DNA MER1_type -80 109 4 319 221 287 0 chr5 96156844 96156966 -106928566 + L3 LINE CR1 1418 1574 -3 437 238 233 30 chr5 96159913 96160115 -106925417 - MIR SINE MIR -1 261 19 606 197 16 24 chr5 96160242 96160369 -106925163 + FLAM_A SINE Alu 5 130 -3 245 248 117 48 chr5 96161822 96162028 -106923504 + L1MC/D LINE L1 4558 4777 -1369 1456 174 21 24 chr5 96162151 96162439 -106923093 + AluJb SINE Alu 2 288 -24 24 53 0 0 chr5 96162499 96162537 -106922995 + AT_rich Low_complexity Low_complexity 1 38 0 1886 116 84 9 chr5 96162540 96162860 -106922672 - MER2 DNA MER2_type 0 344 1 2066 109 16 13 chr5 96162899 96163203 -106922329 + AluY SINE Alu 1 305 -6 328 236 107 0 chr5 96163206 96163346 -106922186 + L1MC/D LINE L1 5315 5469 -2339 729 186 236 15 chr5 96163630 96163718 -106921814 + MER5C DNA MER1_type 2 69 -255 2211 106 13 3 chr5 96163718 96164019 -106921513 - AluSx SINE Alu -8 304 1 729 186 236 15 chr5 96164019 96164193 -106921339 + MER5C DNA MER1_type 69 322 -2 824 250 36 18 chr5 96164348 96164568 -106920964 - MER58A DNA MER1_type 0 224 1 2152 76 0 0 chr5 96165291 96165553 -106919979 + AluY SINE Alu 41 302 -9 338 197 0 0 chr5 96167653 96167716 -106917816 - MER20 DNA MER1_type 0 219 157 1090 228 40 34 chr5 96167716 96168041 -106917491 - MLT1D LTR MaLR 0 505 179 23 0 0 0 chr5 96168588 96168611 -106916921 + AT_rich Low_complexity Low_complexity 1 23 0 359 208 0 113 chr5 96168796 96168902 -106916630 - MIR SINE MIR -114 148 55 23 0 0 0 chr5 96169336 96169359 -106916173 + AT_rich Low_complexity Low_complexity 1 23 0 1535 192 10 17 chr5 96170215 96170507 -106915025 + AluJb SINE Alu 1 290 -22 246 314 70 35 chr5 96170599 96170685 -106914847 + L2 LINE L2 3184 3272 0 329 250 152 33 chr5 96170782 96170966 -106914566 - MER46C DNA MER2_type -5 333 128 408 326 138 41 chr5 96172501 96173089 -106912443 + L2 LINE L2 1064 1708 -1606 226 311 45 102 chr5 96173115 96173195 -106912337 + L2 LINE L2 2442 2525 -789 1186 160 43 22 chr5 96173195 96173426 -106912106 + MER46A DNA MER2_type 1 236 0 226 311 45 102 chr5 96173426 96173679 -106911853 + L2 LINE L2 2525 2756 -558 310 352 195 35 chr5 96173840 96174096 -106911436 + L2 LINE L2 2951 3247 -25 390 257 20 10 chr5 96174454 96174555 -106910977 + MER5A DNA MER1_type 88 189 0 199 328 206 28 chr5 96175634 96175814 -106909718 - L2 LINE L2 -784 2530 2319 306 0 0 0 chr5 96176349 96176383 -106909149 + (TG)n Simple_repeat Simple_repeat 2 35 0 683 258 145 14 chr5 96176598 96176819 -106908713 - MIR SINE MIR -7 255 6 400 95 0 40 chr5 96178474 96178548 -106906984 + MLT1C LTR MaLR 397 467 0 259 353 132 15 chr5 96178708 96178912 -106906620 + L2 LINE L2 2578 2805 -509 389 277 149 32 chr5 96179927 96180115 -106905417 - L2 LINE L2 -233 3080 2871 25 0 0 0 chr5 96180539 96180564 -106904968 + AT_rich Low_complexity Low_complexity 1 25 0 1961 124 0 0 chr5 96181669 96181942 -106903590 - AluSx SINE Alu -1 311 39 201 39 0 0 chr5 96182645 96182671 -106902861 + (CA)n Simple_repeat Simple_repeat 1 26 0 389 136 12 49 chr5 96183341 96183422 -106902110 + MER31A LTR ERV1 1 78 -388 743 145 0 92 chr5 96183441 96183593 -106901939 - Tigger5 DNA MER2_type 0 2323 2186 * 1026 183 102 0 chr5 96183592 96183778 -106901754 - Tigger5 DNA MER2_type -2118 205 1 * 1322 187 41 35 chr5 96183778 96184135 -106901397 + MER31A LTR ERV1 94 471 -14 582 216 35 29 chr5 96184142 96184313 -106901219 + MIR SINE MIR 91 262 0 325 283 159 9 chr5 96184950 96185063 -106900469 - MER5A DNA MER1_type -1 188 59 562 223 139 18 chr5 96185080 96185246 -106900286 - MER5A DNA MER1_type -2 187 2 798 197 77 33 chr5 96185652 96185835 -106899697 + MER58B DNA MER1_type 1 191 -150 260 62 0 0 chr5 96185830 96185862 -106899670 - MLT2B1 LTR ERVL -8 406 375 * 210 298 0 0 chr5 96185873 96185920 -106899612 + (TG)n Simple_repeat Simple_repeat 2 48 0 869 214 65 123 chr5 96185942 96186283 -106899249 - MLT2B1 LTR ERVL -67 347 27 4017 154 63 22 chr5 96186285 96187049 -106898483 - ERVL-B1 LTR ERVL -6 5758 4964 836 69 0 0 chr5 96187066 96187167 -106898365 - U6 snRNA snRNA -6 101 1 3103 150 14 27 chr5 96187172 96187691 -106897841 - ERVL-B1 LTR ERVL -820 4944 4433 6043 206 39 25 chr5 96187707 96188967 -106896565 - ERVL-B1 LTR ERVL -4315 1449 173 1063 223 94 87 chr5 96188992 96189396 -106896136 - MLT2B1 LTR ERVL -56 408 2 875 178 0 31 chr5 96189403 96189566 -106895966 + MER58B DNA MER1_type 180 337 -4 265 354 208 0 chr5 96189579 96189723 -106895809 - MER5A DNA MER1_type -1 188 15 2176 117 0 0 chr5 96189943 96190241 -106895291 - AluSq SINE Alu -15 298 1 2072 93 20 27 chr5 96191082 96191382 -106894150 - AluSx SINE Alu -14 298 1 229 363 42 46 chr5 96191902 96191935 -106893597 + L2 LINE L2 2648 2680 -634 361 298 22 39 chr5 96191935 96192116 -106893416 + MER5B DNA MER1_type 1 178 0 229 363 42 46 chr5 96192116 96192366 -106893166 + L2 LINE L2 2680 2930 -384 1174 171 60 12 chr5 96192900 96193151 -106892381 - ORSL DNA AcHobo 0 275 13 6848 40 14 5 chr5 96193481 96194650 -106890882 - L1PA7 LINE L1 0 6154 4963 2053 82 0 0 chr5 96194652 96194931 -106890601 - L1P LINE L1 -1078 5068 4790 2757 31 0 0 chr5 96195653 96196007 -106889525 + L1PA3 LINE L1 5817 6170 0 250 323 46 15 chr5 96196137 96196267 -106889265 + MLT1K LTR MaLR 192 325 -263 485 188 188 0 chr5 96196721 96196833 -106888699 - FLAM_A SINE Alu 0 133 1 465 194 10 48 chr5 96196844 96196947 -106888585 - MER31A LTR ERV1 -28 457 359 32 26 0 0 chr5 96196972 96197011 -106888521 + AT_rich Low_complexity Low_complexity 1 39 0 1088 202 51 23 chr5 96197323 96197580 -106887952 - LTR40a LTR ERVL 0 519 256 1798 185 19 27 chr5 96199145 96199513 -106886019 + MLT1A1 LTR MaLR 1 365 0 271 300 89 45 chr5 96199997 96200183 -106885349 - MIR SINE MIR -65 197 8 225 357 31 10 chr5 96200773 96200871 -106884661 + MIR SINE MIR 1 100 -162 25 31 0 0 chr5 96201270 96201302 -106884230 + AT_rich Low_complexity Low_complexity 1 32 0 314 189 9 0 chr5 96201937 96202043 -106883489 + (CA)n Simple_repeat Simple_repeat 2 108 0 503 219 89 16 chr5 96203606 96203729 -106881803 + MER5B DNA MER1_type 1 132 -46 426 266 45 81 chr5 96203798 96203951 -106881581 - L1MC4 LINE L1 -108 7934 7777 1639 130 57 70 chr5 96203951 96204252 -106881280 + AluSx SINE Alu 1 297 -15 426 266 45 81 chr5 96204252 96204432 -106881100 - L1MC4 LINE L1 -265 7777 7613 22 0 0 0 chr5 96204434 96204456 -106881076 + AT_rich Low_complexity Low_complexity 1 22 0 6560 155 21 25 chr5 96204577 96206054 -106879478 - L1MA8 LINE L1 -5 6286 4804 221 56 0 28 chr5 96206054 96206090 -106879442 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 6560 155 21 25 chr5 96206090 96206109 -106879423 - L1MA8 LINE L1 -1487 4804 4786 2078 86 0 4 chr5 96206109 96206376 -106879156 - AluY SINE Alu -45 266 1 6560 155 21 25 chr5 96206376 96207129 -106878403 - L1MA8 LINE L1 -1505 4786 4047 276 331 97 24 chr5 96207670 96207794 -106877738 + L2 LINE L2 3139 3271 -1 2058 123 0 3 chr5 96207887 96208180 -106877352 + AluSg1 SINE Alu 3 294 -15 13660 131 39 4 chr5 96208234 96210427 -106875105 - Tigger1 DNA MER2_type 0 2418 150 25 65 0 0 chr5 96210436 96210482 -106875050 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr5 96210541 96210576 -106874956 + AT_rich Low_complexity Low_complexity 1 35 0 249 326 0 61 chr5 96211031 96211129 -106874403 - L2 LINE L2 -167 3105 3014 302 346 8 31 chr5 96211249 96211379 -106874153 - L2 LINE L2 -1 3271 3145 565 333 47 18 chr5 96211415 96211757 -106873775 - L2 LINE L2 -508 2806 2455 5374 50 4 4 chr5 96211762 96212468 -106873064 - L1P LINE L1 -4410 1736 1031 654 348 59 10 chr5 96212752 96213148 -106872384 - LTR16B LTR ERVL -76 388 1 22 0 0 0 chr5 96214141 96214163 -106871369 + AT_rich Low_complexity Low_complexity 1 22 0 542 209 101 0 chr5 96214287 96214416 -106871116 + MLT1F1 LTR MaLR 1 142 -425 781 250 43 5 chr5 96214652 96214840 -106870692 + MIR SINE MIR 60 254 -8 27 29 0 0 chr5 96214864 96214898 -106870634 + AT_rich Low_complexity Low_complexity 1 34 0 1521 135 19 10 chr5 96214898 96215271 -106870261 - L1P4 LINE L1 -670 5496 5115 194 0 39 0 chr5 96215271 96215297 -106870235 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1521 135 19 10 chr5 96215297 96215318 -106870214 - L1P4 LINE L1 -1051 5115 5096 3814 108 73 5 chr5 96215326 96215930 -106869602 + L1PA16 LINE L1 5513 6157 -9 225 132 0 0 chr5 96219429 96219467 -106866065 + (T)n Simple_repeat Simple_repeat 1 38 0 794 171 77 43 chr5 96221012 96221300 -106864232 - MER33 DNA MER1_type 0 363 10 237 380 42 78 chr5 96222380 96222741 -106862791 - L2 LINE L2 0 3272 2925 1763 169 40 3 chr5 96222753 96223054 -106862478 - AluJb SINE Alu 0 312 1 280 225 12 0 chr5 96224007 96224087 -106861445 + (TA)n Simple_repeat Simple_repeat 2 82 0 499 307 10 16 chr5 96224199 96224391 -106861141 + LTR16C LTR ERVL 287 477 -14 2046 144 73 14 chr5 96224725 96225093 -106860439 - MLT1B LTR MaLR 0 390 1 1261 264 59 44 chr5 96225337 96226337 -106859195 - L1ME3A LINE L1 -232 5938 4915 589 164 8 8 chr5 96226415 96226549 -106858983 - L1MA4A LINE L1 0 7005 6872 3543 137 17 11 chr5 96226554 96227642 -106857890 - L1PB1 LINE L1 -2 6149 4868 * 6399 189 13 1 chr5 96227640 96228902 -106856630 + L1PB1 LINE L1 3591 4867 -1279 * 10398 173 35 13 chr5 96228901 96231987 -106853545 - L1MA4A LINE L1 -117 6888 3729 9452 78 9 3 chr5 96231996 96234087 -106851445 - L1PA7 LINE L1 0 6154 4054 1281 265 15 3 chr5 96234086 96234410 -106851122 - L1MA4A LINE L1 -6512 337 10 * 26 88 0 0 chr5 96234741 96234809 -106850723 + AT_rich Low_complexity Low_complexity 1 68 0 2606 56 0 18 chr5 96234809 96235150 -106850382 - L1PA7 LINE L1 -2 6152 5818 311 327 13 53 chr5 96235170 96235320 -106850212 - MIR3 SINE MIR -35 173 30 2006 141 13 0 chr5 96235987 96236293 -106849239 + AluSx SINE Alu 3 312 0 684 186 107 29 chr5 96236585 96236896 -106848636 - LTR54B LTR ERV1 -131 367 1 1400 239 63 7 chr5 96236898 96237313 -106848219 - L1MEc LINE L1 -1140 5075 4638 1137 123 70 73 chr5 96237353 96237655 -106847877 - MER33 DNA MER1_type -33 291 1 2668 228 52 33 chr5 96237752 96238307 -106847225 - L1MEc LINE L1 -1689 4526 3944 2495 58 0 13 chr5 96238307 96238616 -106846916 - AluY SINE Alu -6 305 1 2668 228 52 33 chr5 96238616 96239031 -106846501 - L1MEc LINE L1 -2271 3944 3538 29485 124 17 50 chr5 96239040 96245429 -106840103 + L1PA8 LINE L1 5 6172 0 2954 264 53 11 chr5 96245493 96246637 -106838895 - L1MEc LINE L1 -2685 3530 2339 506 221 210 22 chr5 96247280 96247461 -106838071 + MIR SINE MIR 48 262 0 221 307 34 23 chr5 96247455 96247543 -106837989 + MIR SINE MIR 66 154 -108 * 286 366 7 7 chr5 96247665 96247807 -106837725 + L2 LINE L2 734 875 -2439 3486 115 40 12 chr5 96248252 96248824 -106836708 + Tigger1 DNA MER2_type 1722 2309 -109 1256 206 45 15 chr5 96248901 96249168 -106836364 - AluJo SINE Alu -22 290 16 763 164 0 0 chr5 96249171 96249287 -106836245 + Tigger1 DNA MER2_type 2301 2416 -2 1374 259 82 37 chr5 96249288 96249829 -106835703 - L1MEc LINE L1 -4033 2363 1781 2044 118 10 3 chr5 96249829 96250125 -106835407 - AluSx SINE Alu -14 298 1 1374 259 82 37 chr5 96250125 96250293 -106835239 - L1MEc LINE L1 -4615 1781 1622 * 2989 187 71 17 chr5 96250283 96250930 -106834602 - L1MA10 LINE L1 -1 6333 5652 3172 46 8 0 chr5 96250932 96251325 -106834207 - L1PA7 LINE L1 0 6154 5759 24779 96 8 3 chr5 96251328 96254902 -106830630 - L1P LINE L1 -981 5165 1577 7612 103 19 9 chr5 96254900 96256101 -106829431 + L1P3 LINE L1 683 1890 -4571 * 11442 209 33 49 chr5 96256070 96258898 -106826634 - L1M2 LINE L1 -615 5933 3063 2201 114 3 0 chr5 96258898 96259195 -106826337 - AluSp SINE Alu -15 298 1 11442 209 33 49 chr5 96259195 96259308 -106826224 - L1M2 LINE L1 -3485 3063 2950 201 39 0 0 chr5 96259308 96259334 -106826198 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1717 181 0 7 chr5 96259341 96259618 -106825914 - AluSx SINE Alu -35 277 3 11442 209 33 49 chr5 96259618 96260563 -106824969 - L1M2 LINE L1 -3604 2944 2092 726 199 15 0 chr5 96260657 96260788 -106824744 - FLAM_A SINE Alu 0 133 1 542 299 48 11 chr5 96260910 96261097 -106824435 - L1M2 LINE L1 -5132 1181 988 2288 107 21 48 chr5 96261135 96261509 -106824023 + THE1B LTR MaLR 1 364 0 551 250 75 0 chr5 96261923 96262043 -106823489 - L1M2 LINE L1 -5752 561 433 1840 214 35 35 chr5 96262043 96262561 -106822971 + L1PB4 LINE L1 2346 2863 -3986 * 5614 186 48 13 chr5 96262555 96264324 -106821208 + L1PB4 LINE L1 4675 6531 -327 405 0 0 0 chr5 96264324 96264369 -106821163 + (CA)n Simple_repeat Simple_repeat 2 46 0 5614 186 48 13 chr5 96264369 96264710 -106820822 + L1PB4 LINE L1 6531 6858 0 451 295 90 6 chr5 96265095 96265251 -106820281 - MIR SINE MIR -38 224 56 310 309 49 60 chr5 96265491 96265756 -106819776 - MLT1K LTR MaLR -15 573 312 1888 173 158 174 chr5 96265813 96266842 -106818690 + LTR28 LTR ERV1 8 1020 0 301 261 63 111 chr5 96266855 96267062 -106818470 - MLT1K LTR MaLR -348 240 44 1989 137 45 17 chr5 96269799 96270157 -106815375 + L1PA16 LINE L1 5798 6165 -1 21 0 0 0 chr5 96270280 96270301 -106815231 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr5 96271477 96271532 -106814000 + AT_rich Low_complexity Low_complexity 1 55 0 2014 135 0 7 chr5 96271532 96271821 -106813711 - AluSx SINE Alu -25 287 1 246 176 0 0 chr5 96272474 96272525 -106813007 + A-rich Low_complexity Low_complexity 1 51 0 2504 241 37 15 chr5 96272636 96273079 -106812453 + L1MB5 LINE L1 3976 4444 -1702 3075 165 21 12 chr5 96273079 96273594 -106811938 + MLT2B1 LTR ERVL 1 520 0 2504 241 37 15 chr5 96273594 96273905 -106811627 + L1MB5 LINE L1 4444 4747 -1399 502 154 0 0 chr5 96273905 96273983 -106811549 + U3 snRNA snRNA 1 78 -139 14005 181 17 11 chr5 96273986 96276681 -106808851 + L1P LINE L1 1996 4709 -1437 2181 132 0 0 chr5 96276681 96276985 -106808547 + AluSc SINE Alu 1 304 -5 14005 181 17 11 chr5 96276985 96277039 -106808493 + L1P LINE L1 4709 4761 -1385 3650 115 0 4 chr5 96277039 96277552 -106807980 + MER9 LTR ERVK 1 511 0 42009 68 2 2 chr5 96277552 96282840 -106802692 + HERVK9 LTR ERVK 1 5284 -632 15135 56 2 3 chr5 96282840 96285801 -106799731 + L1PA5 LINE L1 3199 6154 0 1319 39 0 0 chr5 96285802 96285955 -106799577 + HERVK9 LTR ERVK 5271 5423 -493 1214 71 12 12 chr5 96285955 96286125 -106799407 + MER9 LTR ERVK 295 464 -47 3358 82 62 0 chr5 96286130 96286581 -106798951 + HERVK9 LTR ERVK 5438 5916 0 3661 102 4 4 chr5 96286581 96287090 -106798442 + MER9 LTR ERVK 1 509 -2 1636 192 27 84 chr5 96287093 96287615 -106797917 + L1MB5 LINE L1 4757 5248 -898 1165 224 63 1 chr5 96287613 96288020 -106797512 + L1MB5 LINE L1 5711 6175 -3 * 411 350 158 16 chr5 96288190 96288556 -106796976 + HAL1 LINE L1 1115 1532 -975 281 221 42 11 chr5 96288779 96288874 -106796658 + (TA)n Simple_repeat Simple_repeat 2 99 0 2045 151 0 6 chr5 96288961 96289273 -106796259 + AluSx SINE Alu 1 310 -2 302 293 61 10 chr5 96289752 96289950 -106795582 + L1M4 LINE L1 2183 2390 -3756 361 281 41 18 chr5 96290342 96290563 -106794969 + L1M4 LINE L1 2792 3017 -3129 198 0 0 0 chr5 96290811 96290833 -106794699 + (TATG)n Simple_repeat Simple_repeat 4 25 0 878 107 15 0 chr5 96290959 96291090 -106794442 - MER50 LTR ERV1 -24 710 578 308 169 0 42 chr5 96291083 96291154 -106794378 - MER50 LTR ERV1 -260 474 407 * 1583 146 4 8 chr5 96291160 96291407 -106794125 - MER50 LTR ERV1 -488 246 1 302 240 70 40 chr5 96291602 96291702 -106793830 + L1M4 LINE L1 3872 3974 -2172 1702 181 0 20 chr5 96292090 96292388 -106793144 - AluJb SINE Alu -18 294 3 2784 289 45 30 chr5 96292435 96293374 -106792158 + MER45C DNA AcHobo 1 953 0 1959 137 13 13 chr5 96293434 96293740 -106791792 - AluSx SINE Alu -6 306 1 1549 124 4 0 chr5 96294063 96294305 -106791227 + MER46B DNA MER2_type 119 236 0 318 26 0 0 chr5 96294525 96294564 -106790968 + (CA)n Simple_repeat Simple_repeat 2 40 0 734 179 110 29 chr5 96294826 96294999 -106790533 - MER90 LTR ERV1 -6 569 383 682 212 114 33 chr5 96295019 96295203 -106790329 - MER90 LTR ERV1 -415 199 1 1770 117 94 47 chr5 96296027 96296325 -106789207 + AluSx SINE Alu 1 312 0 637 196 11 17 chr5 96296510 96296689 -106788843 + CT-rich Low_complexity Low_complexity 3 180 0 222 146 0 49 chr5 96298219 96298260 -106787272 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 637 304 74 39 chr5 96299025 96299361 -106786171 + LTR16C LTR ERVL 142 489 -2 260 281 169 0 chr5 96299741 96299830 -106785702 - L2 LINE L2 0 3272 3169 * 416 176 130 56 chr5 96299799 96299907 -106785625 + MIR SINE MIR 135 250 -12 881 73 16 0 chr5 96300079 96300202 -106785330 + L1PA4 LINE L1 6027 6151 -4 33 0 0 0 chr5 96300202 96300235 -106785297 + AT_rich Low_complexity Low_complexity 1 33 0 389 66 96 18 chr5 96300235 96300402 -106785130 + (TA)n Simple_repeat Simple_repeat 1 180 0 73 0 0 0 chr5 96300402 96300475 -106785057 + AT_rich Low_complexity Low_complexity 1 73 0 318 175 0 100 chr5 96300586 96300666 -106784866 - L2 LINE L2 0 3313 3242 308 169 42 28 chr5 96300943 96301014 -106784518 + Charlie8 DNA MER1_type 152 223 -2194 1630 278 80 73 chr5 96301027 96302008 -106783524 - HAL1 LINE L1 -357 2150 1177 207 0 0 0 chr5 96302008 96302031 -106783501 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1630 278 80 73 chr5 96302031 96302264 -106783268 - HAL1 LINE L1 -1330 1177 947 1138 51 23 17 chr5 96302264 96302440 -106783092 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1630 278 80 73 chr5 96302440 96302776 -106782756 - HAL1 LINE L1 -1560 947 588 285 98 0 0 chr5 96302890 96302931 -106782601 + (TG)n Simple_repeat Simple_repeat 1 41 0 547 329 75 24 chr5 96302996 96303439 -106782093 - L2 LINE L2 -208 3105 2641 386 274 120 0 chr5 96304843 96304960 -106780572 + MER94 DNA DNA 3 133 -1 24 32 0 0 chr5 96305062 96305093 -106780439 + AT_rich Low_complexity Low_complexity 1 31 0 251 211 0 13 chr5 96305185 96305261 -106780271 + (TA)n Simple_repeat Simple_repeat 1 75 0 292 111 0 0 chr5 96305444 96305489 -106780043 + L2 LINE L2 3268 3312 -1 344 301 0 0 chr5 96305566 96305649 -106779883 - L3 LINE CR1 -802 775 693 23 33 0 0 chr5 96306570 96306600 -106778932 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 96307094 96307115 -106778417 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 96308928 96308952 -106776580 + AT_rich Low_complexity Low_complexity 1 24 0 861 260 95 76 chr5 96311421 96312159 -106773373 + L2 LINE L2 2565 3312 -1 238 250 38 0 chr5 96312460 96312540 -106772992 + CT-rich Low_complexity Low_complexity 2 84 0 25 75 0 0 chr5 96313679 96313732 -106771800 + AT_rich Low_complexity Low_complexity 1 53 0 4384 50 2 0 chr5 96314594 96315134 -106770398 - L1PA5 LINE L1 -1 6153 5613 1627 182 3 7 chr5 96315148 96315456 -106770076 - L1 LINE L1 -1867 4279 3973 625 302 118 43 chr5 96315550 96315922 -106769610 + L2 LINE L2 2616 3016 -297 2095 30 0 0 chr5 96315947 96316520 -106769012 - L1PA4 LINE L1 0 6155 5493 * 3895 27 0 16 chr5 96316517 96317095 -106768437 + L1PA4 LINE L1 4917 5485 -670 424 289 155 50 chr5 96317151 96317434 -106768098 - L1M4 LINE L1 -1523 4623 4371 2069 127 0 0 chr5 96317434 96317725 -106767807 - AluSq SINE Alu -22 291 1 424 289 155 50 chr5 96317725 96317919 -106767613 - L1M4 LINE L1 -1775 4371 4096 744 242 160 13 chr5 96318804 96319035 -106766497 - LTR16A1 LTR ERVL 0 457 193 473 316 146 45 chr5 96319134 96319283 -106766249 - L1 LINE L1 -1127 5019 4886 180 0 0 0 chr5 96319283 96319303 -106766229 + (TA)n Simple_repeat Simple_repeat 2 21 0 473 316 146 45 chr5 96319303 96319687 -106765845 - L1 LINE L1 -1260 4886 4432 1789 260 37 0 chr5 96319978 96320413 -106765119 - ERVL LTR ERVL -954 4810 4360 2300 107 19 26 chr5 96320414 96320780 -106764752 - THE1C LTR MaLR -10 422 1 9691 126 51 10 chr5 96320780 96322297 -106763235 - THE1C-int LTR MaLR 0 1580 1 2379 128 19 16 chr5 96322297 96322671 -106762861 - THE1C LTR MaLR 0 375 1 1023 270 45 9 chr5 96322719 96323152 -106762380 - ERVL LTR ERVL -1458 4196 3658 251 302 148 30 chr5 96324067 96324236 -106761296 + MIR SINE MIR 57 245 -17 1748 254 54 32 chr5 96324401 96325047 -106760485 - L1MC4 LINE L1 -145 7897 7238 1715 226 98 26 chr5 96325048 96325371 -106760161 - L1MC4 LINE L1 -963 7079 6700 2497 235 34 21 chr5 96325371 96325997 -106759535 + LTR27 LTR ERV1 3 636 0 1715 226 98 26 chr5 96325997 96326214 -106759318 - L1MC4 LINE L1 -1342 6700 6500 272 242 61 67 chr5 96326771 96326936 -106758596 - L1MEd LINE L1 -5940 179 16 441 147 29 0 chr5 96328520 96328588 -106756944 + MER5A DNA MER1_type 15 84 -105 11177 101 7 2 chr5 96329026 96331438 -106754094 - L1PA7 LINE L1 -3 6466 4040 10000 107 10 6 chr5 96331438 96332947 -106752585 - L1P LINE L1 -2147 3999 2485 * 11697 115 8 5 chr5 96332940 96334632 -106750900 - L1PA7 LINE L1 -4758 1703 8 22 56 0 0 chr5 96334821 96334857 -106750675 + AT_rich Low_complexity Low_complexity 1 36 0 220 359 0 16 chr5 96334892 96334956 -106750576 + MER91 DNA MER1_type 127 189 -1 568 330 121 47 chr5 96336299 96336744 -106748788 - L2 LINE L2 -8 3305 2828 1034 244 66 41 chr5 96336892 96337256 -106748276 + MLT1A2 LTR MaLR 1 373 -1 1534 329 137 21 chr5 96337311 96338428 -106747104 - L2 LINE L2 -1144 2170 925 23 0 0 0 chr5 96338587 96338610 -106746922 + AT_rich Low_complexity Low_complexity 1 23 0 196 368 0 0 chr5 96338672 96338740 -106746792 - MIR SINE MIR -115 147 80 531 255 69 19 chr5 96338817 96339123 -106746409 - MLT1J2 LTR MaLR -64 386 29 2125 75 0 44 chr5 96339527 96339863 -106745669 - AluY SINE Alu 0 323 1 635 247 153 18 chr5 96340861 96341137 -106744395 - MLT1J2 LTR MaLR -71 375 64 273 161 36 18 chr5 96341488 96341544 -106743988 + MLT1D LTR MaLR 1 57 -448 1334 179 92 31 chr5 96341558 96341883 -106743649 + MLT1D LTR MaLR 159 503 -2 47 61 0 0 chr5 96341959 96342041 -106743491 + AT_rich Low_complexity Low_complexity 1 82 0 1317 300 57 0 chr5 96342041 96342531 -106743001 - MER69B DNA AcHobo -329 897 380 4061 155 33 44 chr5 96342602 96343594 -106741938 + MER11C LTR ERVK 1 1070 -1 426 306 40 45 chr5 96343595 96343817 -106741715 - MER69B DNA AcHobo -956 270 50 667 224 0 8 chr5 96345175 96345300 -106740232 - FLAM_A SINE Alu -9 124 1 945 287 92 71 chr5 96345984 96346661 -106738871 + MER21B LTR ERV1 24 714 -149 185 306 145 0 chr5 96346709 96346771 -106738761 - L2 LINE L2 -61 3211 3141 255 172 11 92 chr5 96347079 96347166 -106738366 - MER116 DNA Mariner 0 80 1 1840 176 52 49 chr5 96348320 96348706 -106736826 - MLT1B LTR MaLR -3 387 1 606 303 101 38 chr5 96349846 96350163 -106735369 + HAL1b LINE L1 13 349 -999 234 336 10 0 chr5 96350218 96350322 -106735210 + HAL1b LINE L1 505 609 -739 2775 83 13 3 chr5 96350471 96350855 -106734677 + L1PA8A LINE L1 5744 6131 0 196 314 151 0 chr5 96351137 96351223 -106734309 + MIR SINE MIR 43 141 -67 264 276 0 0 chr5 96351284 96351342 -106734190 + GA-rich Low_complexity Low_complexity 2 59 0 3242 123 69 9 chr5 96351465 96352019 -106733513 - L1PA14 LINE L1 -2 6159 5573 313 326 37 47 chr5 96352124 96352339 -106733193 - L1M4 LINE L1 -2994 3152 2940 6771 173 33 47 chr5 96352527 96352704 -106732828 - L1MA4 LINE L1 0 6171 5993 2390 85 3 3 chr5 96352704 96353011 -106732521 - AluSc SINE Alu -2 307 1 6771 173 33 47 chr5 96353011 96353890 -106731642 - L1MA4 LINE L1 -178 5993 5103 2370 93 3 3 chr5 96353890 96354201 -106731331 - AluSp SINE Alu -2 311 1 6771 173 33 47 chr5 96354201 96355628 -106729904 - L1MA4 LINE L1 -1068 5103 3643 2441 122 46 37 chr5 96355640 96355698 -106729834 - MLT2A1 LTR ERVL -7 437 381 450 94 0 0 chr5 96355698 96355762 -106729770 + (TA)n Simple_repeat Simple_repeat 1 64 0 2441 122 46 37 chr5 96355762 96356136 -106729396 - MLT2A1 LTR ERVL -63 381 1 40799 90 6 5 chr5 96356136 96356587 -106728945 - HERVL-A1-A2 LTR ERVL 0 5654 5205 216 0 0 0 chr5 96356587 96356611 -106728921 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 40799 90 6 5 chr5 96356611 96361810 -106723722 - HERVL-A1-A2 LTR ERVL -449 5205 1 2878 106 39 14 chr5 96361810 96362252 -106723280 - MLT2A2 LTR ERVL 0 453 1 2248 143 11 3 chr5 96362252 96362609 -106722923 - THE1B LTR MaLR -3 361 1 9651 122 36 28 chr5 96362609 96364176 -106721356 - THE1B-int LTR MaLR 0 1580 1 2562 117 3 16 chr5 96364176 96364545 -106720987 - THE1B LTR MaLR 0 364 1 252 59 0 0 chr5 96364621 96364655 -106720877 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5139 129 31 12 chr5 96364656 96365569 -106719963 - L1PA14 LINE L1 -2 6159 5231 7977 228 54 28 chr5 96365576 96369431 -106716101 - L1PA12 LINE L1 -3891 3693 10 4411 222 34 17 chr5 96369444 96371411 -106714121 - L1M4 LINE L1 -2577 4988 2949 392 239 263 34 chr5 96422674 96422879 -106662653 - MIR SINE MIR -9 253 2 1938 109 0 30 chr5 96424736 96425040 -106660492 - AluSx SINE Alu -17 295 1 3955 166 19 26 chr5 96425046 96425765 -106659767 + L1MB3 LINE L1 5468 6181 -2 300 282 103 0 chr5 96426109 96426226 -106659306 - MLT1I LTR MaLR -244 165 37 240 202 293 0 chr5 96426618 96426717 -106658815 + MLT1I LTR MaLR 1 128 -281 21 82 0 0 chr5 96426967 96427016 -106658516 + AT_rich Low_complexity Low_complexity 1 49 0 1552 213 62 37 chr5 96427347 96427751 -106657781 + MLT1C LTR MaLR 41 461 -6 2499 55 0 0 chr5 96429498 96429826 -106655706 + AluY SINE Alu 1 328 0 298 198 107 66 chr5 96429920 96430041 -106655491 - MLT1J1 LTR MaLR -317 129 4 301 106 0 0 chr5 96430708 96430755 -106654777 - L1PA8 LINE L1 0 6172 6126 509 173 17 190 chr5 96430856 96430996 -106654536 + Charlie2 DNA MER1_type 2591 2657 -205 8108 27 5 0 chr5 96430996 96432145 -106653387 + L1PA4 LINE L1 5000 6152 -3 509 173 17 190 chr5 96432145 96432293 -106653239 + Charlie2 DNA MER1_type 2657 2829 -33 227 215 0 127 chr5 96432433 96432481 -106653051 - MER46C DNA MER2_type -66 272 236 1253 247 108 44 chr5 96432481 96432999 -106652533 + MLT1H1 LTR MaLR 1 551 -4 227 215 0 127 chr5 96432999 96433029 -106652503 - MER46C DNA MER2_type -102 236 204 272 324 0 0 chr5 96433530 96433598 -106651934 - MIR SINE MIR -164 98 31 2907 113 18 5 chr5 96433850 96433936 -106651596 + L1PB1 LINE L1 5708 5791 -360 387 0 0 0 chr5 96433936 96433979 -106651553 + (CA)n Simple_repeat Simple_repeat 2 44 0 2907 113 18 5 chr5 96433979 96434327 -106651205 + L1PB1 LINE L1 5791 6148 -3 226 143 0 0 chr5 96434380 96434422 -106651110 + LTR66 LTR ERVL 400 441 -169 362 149 0 14 chr5 96434428 96434502 -106651030 + (TA)n Simple_repeat Simple_repeat 1 73 0 845 194 44 6 chr5 96435537 96435697 -106649835 + FRAM SINE Alu 1 160 -16 1095 71 0 155 chr5 96435700 96435926 -106649606 + AluSc SINE Alu 1 191 -118 223 167 42 21 chr5 96436085 96436133 -106649399 + (TAA)n Simple_repeat Simple_repeat 2 50 0 348 188 78 5 chr5 96437056 96437163 -106648369 - L1MC5 LINE L1 0 8042 7813 630 198 89 108 chr5 96439176 96439434 -106646098 - LTR8 LTR ERV1 -474 253 1 1819 261 110 23 chr5 96439434 96440463 -106645069 - L1MDb LINE L1 -4536 1870 783 1652 191 27 0 chr5 96441282 96441618 -106643914 - L1MB2 LINE L1 -1 6170 5826 1189 127 25 20 chr5 96441622 96441819 -106643713 + THE1B LTR MaLR 14 211 -153 991 285 12 13 chr5 96441919 96442316 -106643216 - LTR16B LTR ERVL -99 365 1 224 386 57 14 chr5 96442363 96442503 -106643029 - L2 LINE L2 -209 3063 2918 196 286 143 0 chr5 96442857 96442955 -106642577 - L2 LINE L2 -1 3312 3201 965 149 26 16 chr5 96443009 96443203 -106642329 - L1MD3 LINE L1 -32 7963 7768 2502 102 3 3 chr5 96443213 96443575 -106641957 - L1PB1 LINE L1 -6 6145 5784 718 124 18 0 chr5 96443575 96443688 -106641844 + L1PB1 LINE L1 5677 5791 -360 1110 110 58 0 chr5 96443702 96443875 -106641657 + L1P5 LINE L1 5462 5644 -507 290 65 152 0 chr5 96443873 96443919 -106641613 - L1MC3 LINE L1 -214 7571 7519 * 608 178 5 2 chr5 96445596 96445722 -106639810 - LTR1 LTR ERV1 -663 122 1 * 1817 201 65 96 chr5 96445722 96446357 -106639175 - LTR8A LTR ERV1 -112 615 1 2044 262 100 25 chr5 96446357 96447402 -106638130 - L1MDb LINE L1 -4536 1870 783 25 0 0 0 chr5 96448216 96448241 -106637291 + AT_rich Low_complexity Low_complexity 1 25 0 3537 202 77 12 chr5 96448241 96448563 -106636969 - L1MB1 LINE L1 -5 6163 5863 2272 110 22 25 chr5 96448563 96448928 -106636604 + THE1B LTR MaLR 1 364 0 3537 202 77 12 chr5 96448928 96448973 -106636559 - L1MB1 LINE L1 -305 5863 5822 195 42 0 0 chr5 96448973 96448997 -106636535 + (TA)n Simple_repeat Simple_repeat 2 25 0 3537 202 77 12 chr5 96448997 96449522 -106636010 - L1MB1 LINE L1 -346 5822 5212 514 272 83 52 chr5 96449500 96449824 -106635708 - HAL1 LINE L1 -928 1579 1246 * 180 97 0 0 chr5 96450244 96450275 -106635257 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 708 185 15 7 chr5 96450417 96450552 -106634980 - MER2 DNA MER2_type -1 344 209 314 191 103 16 chr5 96450593 96450719 -106634813 + L1ME4a LINE L1 5982 6118 -3 800 122 46 0 chr5 96451019 96451150 -106634382 - MER2 DNA MER2_type -145 200 64 794 252 113 33 chr5 96452280 96452791 -106632741 - L1ME4a LINE L1 -3 6118 5567 23 33 0 0 chr5 96453921 96453951 -106631581 + AT_rich Low_complexity Low_complexity 1 30 0 558 276 14 77 chr5 96454331 96454552 -106630980 - LTR16A1 LTR ERVL -3 454 248 316 229 53 84 chr5 96454677 96454808 -106630724 - HERVL LTR ERVL -1452 4202 4076 1657 280 152 30 chr5 96454829 96455560 -106629972 - L2 LINE L2 -913 2401 1582 2078 143 0 6 chr5 96455760 96456074 -106629458 + AluSx SINE Alu 1 312 0 230 320 48 30 chr5 96456289 96456520 -106629012 - HAL1b LINE L1 -276 1072 838 1789 213 166 8 chr5 96456520 96457008 -106628524 + MLT1F1 LTR MaLR 3 567 0 29 0 0 0 chr5 96457021 96457050 -106628482 + AT_rich Low_complexity Low_complexity 1 29 0 353 239 46 37 chr5 96457103 96457212 -106628320 - HAL1b LINE L1 -807 541 432 576 210 0 0 chr5 96457277 96457396 -106628136 - L1MC3 LINE L1 -1 7784 7666 276 360 80 15 chr5 96457453 96457717 -106627815 - L2 LINE L2 -1092 2222 1942 485 345 77 43 chr5 96458230 96458697 -106626835 - L1MEd LINE L1 -5104 1015 533 647 141 11 40 chr5 96458978 96459155 -106626377 + CT-rich Low_complexity Low_complexity 3 174 0 187 170 19 19 chr5 96459173 96459226 -106626306 + CT-rich Low_complexity Low_complexity 4 56 0 1565 161 15 15 chr5 96459228 96459502 -106626030 - AluJb SINE Alu -38 274 1 643 219 103 0 chr5 96459599 96459745 -106625787 - MER69A DNA AcHobo -16 161 1 33 73 0 0 chr5 96460366 96460434 -106625098 + AT_rich Low_complexity Low_complexity 1 68 0 23 0 0 0 chr5 96460886 96460909 -106624623 + AT_rich Low_complexity Low_complexity 1 23 0 294 216 0 0 chr5 96461561 96461635 -106623897 + (CA)n Simple_repeat Simple_repeat 1 74 0 652 314 65 16 chr5 96462030 96462278 -106623254 + MIR SINE MIR 3 262 0 191 391 45 15 chr5 96462894 96463027 -106622505 - L2 LINE L2 -2614 700 564 1328 86 0 32 chr5 96463912 96464098 -106621434 + AluSq SINE Alu 1 180 -133 702 76 0 34 chr5 96464286 96464405 -106621127 + AluY SINE Alu 175 289 -22 1184 137 0 0 chr5 96464405 96464588 -106620944 + AluSp SINE Alu 121 303 -10 198 0 0 0 chr5 96464894 96464916 -106620616 + (T)n Simple_repeat Simple_repeat 1 22 0 559 282 137 16 chr5 96465521 96465776 -106619756 - MER102b DNA MER1_type -4 337 52 25 0 0 0 chr5 96466830 96466855 -106618677 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr5 96470526 96470573 -106614959 + (TA)n Simple_repeat Simple_repeat 2 48 0 234 191 0 0 chr5 96471659 96471706 -106613826 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 686 273 68 24 chr5 96473027 96473559 -106611973 - L1M4 LINE L1 -2461 3685 3131 231 196 0 20 chr5 96473582 96473633 -106611899 + MIR3 SINE MIR 156 205 -3 22 35 0 0 chr5 96473829 96473858 -106611674 + AT_rich Low_complexity Low_complexity 1 29 0 4563 195 37 5 chr5 96475891 96476594 -106608938 + L1MB2 LINE L1 4930 5688 -483 1668 194 58 3 chr5 96476594 96476919 -106608613 + MER2 DNA MER2_type 1 343 -1 4563 195 37 5 chr5 96476919 96477419 -106608113 + L1MB2 LINE L1 5688 6170 -1 23 0 0 0 chr5 96477850 96477873 -106607659 + AT_rich Low_complexity Low_complexity 1 23 0 380 291 18 0 chr5 96478995 96479105 -106606427 - MIR SINE MIR -10 252 141 312 330 11 0 chr5 96479329 96479420 -106606112 - MIR SINE MIR -111 151 60 360 286 12 0 chr5 96479842 96479926 -106605606 - L2 LINE L2 0 3313 3229 31 26 0 0 chr5 96481402 96481440 -106604092 + AT_rich Low_complexity Low_complexity 1 38 0 207 326 0 0 chr5 96481464 96481513 -106604019 - L2 LINE L2 -42 3271 3223 520 312 79 66 chr5 96481653 96482031 -106603501 + MLT1J LTR MaLR 92 474 -37 230 322 23 11 chr5 96482820 96482907 -106602625 - L2 LINE L2 0 3272 3185 756 339 50 14 chr5 96483222 96483659 -106601873 - L2 LINE L2 -376 2938 2486 222 175 50 88 chr5 96484941 96485021 -106600511 - MIR SINE MIR -61 201 125 329 287 22 52 chr5 96485137 96485273 -106600259 + L3 LINE CR1 1326 1457 -120 2021 246 47 39 chr5 96486232 96486899 -106598633 + L1ME1 LINE L1 5490 6161 -5 180 0 0 0 chr5 96487589 96487609 -106597923 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 738 208 143 0 chr5 96488070 96488224 -106597308 + MER45A DNA AcHobo 2 177 -1 501 252 94 0 chr5 96488267 96488394 -106597138 + MIR SINE MIR 123 261 -1 22 0 0 0 chr5 96488529 96488551 -106596981 + AT_rich Low_complexity Low_complexity 1 22 0 678 164 39 0 chr5 96488655 96488783 -106596749 + MER67D LTR ERV1 1 133 -381 2770 143 25 2 chr5 96488783 96489258 -106596274 - L1P4 LINE L1 -396 5770 5285 3172 135 37 0 chr5 96489258 96489792 -106595740 + L1PA16 LINE L1 5612 6166 0 1472 189 92 71 chr5 96489806 96490186 -106595346 + MER67D LTR ERV1 127 514 0 504 294 105 29 chr5 96490211 96490449 -106595083 + MIR SINE MIR 5 260 -2 211 370 68 35 chr5 96490518 96490829 -106594703 + L2 LINE L2 2578 2898 -416 446 303 29 29 chr5 96491396 96491571 -106593961 - MIR SINE MIR -71 191 17 446 154 125 67 chr5 96492010 96492050 -106593482 + MER81 DNA DNA 4 40 -74 1975 173 22 6 chr5 96492050 96492409 -106593123 - MLT1A1 LTR MaLR 0 365 1 446 154 125 67 chr5 96492409 96492472 -106593060 + MER81 DNA DNA 40 113 -1 2082 114 7 23 chr5 96492573 96492872 -106592660 + AluSx SINE Alu 1 294 -18 189 409 26 39 chr5 96492969 96493123 -106592409 + L2 LINE L2 3112 3263 -9 22 56 0 0 chr5 96493588 96493624 -106591908 + AT_rich Low_complexity Low_complexity 1 36 0 39 22 0 0 chr5 96493903 96493949 -106591583 + AT_rich Low_complexity Low_complexity 1 46 0 12447 207 42 18 chr5 96493958 96495608 -106589924 - L1MB1 LINE L1 -65 6339 4730 2240 102 0 16 chr5 96495608 96495912 -106589620 - AluY SINE Alu -12 299 1 12447 207 42 18 chr5 96495912 96497007 -106588525 - L1MB1 LINE L1 -1674 4730 3663 720 174 0 36 chr5 96497007 96497145 -106588387 - FLAM_A SINE Alu 0 133 1 2262 98 0 3 chr5 96497149 96497446 -106588086 - AluSc SINE Alu -13 296 1 12447 207 42 18 chr5 96497446 96498683 -106586849 - L1MB1 LINE L1 -2743 3661 2251 10854 125 13 2 chr5 96498677 96501136 -106584396 - L1PA10 LINE L1 -78 7528 5051 * 7350 41 5 0 chr5 96501137 96502532 -106583000 - L1PA5 LINE L1 -1 6153 4756 12980 47 4 1 chr5 96502533 96504178 -106581354 + L1PA5 LINE L1 3100 4749 -1397 12102 196 48 73 chr5 96504173 96506683 -106578849 - L1PA10 LINE L1 -2523 5061 2490 * 360 0 0 0 chr5 96506683 96506723 -106578809 + (TA)n Simple_repeat Simple_repeat 2 41 0 2411 105 0 0 chr5 96506726 96507039 -106578493 - AluSp SINE Alu 0 313 1 12102 196 48 73 chr5 96507039 96508464 -106577068 - L1PA10 LINE L1 -5096 2488 1 525 154 0 38 chr5 96508630 96508741 -106576791 - THE1C LTR MaLR -82 293 197 1948 243 68 15 chr5 96508767 96509352 -106576180 - L1M3d LINE L1 -4600 1291 676 409 282 97 71 chr5 96509517 96509789 -106575743 - L1M3d LINE L1 -5266 625 201 589 301 52 0 chr5 96510045 96510218 -106575314 + MIR SINE MIR 79 260 -2 321 310 63 76 chr5 96510238 96510541 -106574991 - L1ME LINE L1 -315 5806 5508 835 286 48 37 chr5 96510608 96510982 -106574550 + MLT1J1 LTR MaLR 9 386 -60 1310 192 91 88 chr5 96511012 96511401 -106574131 + Charlie4a DNA MER1_type 17 409 -1552 1354 133 24 0 chr5 96511401 96511611 -106573921 + L1PB4 LINE L1 5941 6155 -1 1310 192 91 88 chr5 96511611 96511696 -106573836 + Charlie4a DNA MER1_type 409 492 -16 316 321 40 58 chr5 96512646 96512870 -106572662 + MIR SINE MIR 14 233 -29 711 112 0 0 chr5 96513360 96513467 -106572065 + (TA)n Simple_repeat Simple_repeat 1 107 0 202 267 12 23 chr5 96514100 96514186 -106571346 + (TAA)n Simple_repeat Simple_repeat 1 85 0 2135 129 0 0 chr5 96514225 96514520 -106571012 - AluSx SINE Alu -17 295 1 23 33 0 0 chr5 96514838 96514868 -106570664 + AT_rich Low_complexity Low_complexity 1 30 0 780 319 93 32 chr5 96515113 96515574 -106569958 + L2 LINE L2 2821 3309 -4 27 0 0 0 chr5 96517020 96517047 -106568485 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr5 96517909 96517943 -106567589 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 96518117 96518140 -106567392 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 96518400 96518428 -106567104 + AT_rich Low_complexity Low_complexity 1 28 0 218 282 48 48 chr5 96519182 96519285 -106566247 - MIR3 SINE MIR -14 194 92 186 370 63 8 chr5 96520226 96520353 -106565179 + MIR SINE MIR 8 141 -121 5291 71 10 9 chr5 96520591 96521281 -106564251 - LTR8 LTR ERV1 0 691 1 44165 71 38 15 chr5 96521281 96521940 -106563592 - HUERS-P1 LTR ERV1 0 6263 5620 1971 149 0 26 chr5 96521940 96522248 -106563284 + AluSq SINE Alu 1 300 -13 44165 71 38 15 chr5 96522248 96524105 -106561427 - HUERS-P1 LTR ERV1 -643 5620 3806 2054 149 0 0 chr5 96524105 96524401 -106561131 - AluSg SINE Alu -14 296 1 44165 71 38 15 chr5 96524401 96525225 -106560307 - HUERS-P1 LTR ERV1 -2457 3806 3002 2345 82 0 29 chr5 96525225 96525540 -106559992 - AluY SINE Alu 0 311 6 44165 71 38 15 chr5 96525540 96528320 -106557212 - HUERS-P1 LTR ERV1 -3261 3002 3 5262 79 12 0 chr5 96528322 96529005 -106556527 - LTR8 LTR ERV1 0 691 1 2200 121 3 0 chr5 96530352 96530659 -106554873 - AluSp SINE Alu -5 308 1 332 296 30 15 chr5 96530995 96531194 -106554338 + L1ME3A LINE L1 5737 5938 -232 22 35 0 0 chr5 96531520 96531549 -106553983 + AT_rich Low_complexity Low_complexity 1 29 0 362 288 86 58 chr5 96533450 96533916 -106551616 - L1ME4a LINE L1 -26 6095 5617 341 327 87 33 chr5 96533943 96534294 -106551238 - L1ME4a LINE L1 -743 5403 5175 242 295 85 55 chr5 96534394 96534923 -106550609 - L1ME4a LINE L1 -1094 5052 4508 908 226 55 29 chr5 96535122 96535323 -106550209 - MER33 DNA MER1_type -2262 323 110 2303 92 7 0 chr5 96535323 96535617 -106549915 + AluSc SINE Alu 1 296 -13 908 226 55 29 chr5 96535617 96535725 -106549807 - MER33 DNA MER1_type -2475 110 6 941 290 101 35 chr5 96536244 96536335 -106549197 + L2 LINE L2 2453 2537 -776 2300 95 0 3 chr5 96536335 96536629 -106548903 + AluSq SINE Alu 1 293 -20 941 290 101 35 chr5 96536629 96537294 -106548238 + L2 LINE L2 2537 3311 -2 769 269 63 14 chr5 96537598 96537821 -106547711 + MIR SINE MIR 29 262 0 180 333 0 17 chr5 96538681 96538741 -106546791 + MIR SINE MIR 198 256 -6 216 197 15 45 chr5 96540697 96540763 -106544769 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 191 286 133 31 chr5 96543443 96543541 -106541991 + MIR SINE MIR 37 144 -64 218 274 20 0 chr5 96545795 96545846 -106539686 + MIR3 SINE MIR 103 154 -54 1843 153 28 0 chr5 96546622 96546910 -106538622 - AluSx SINE Alu -12 300 5 484 235 221 7 chr5 96547948 96548097 -106537435 - MER5A DNA MER1_type 0 189 9 23 0 0 0 chr5 96549383 96549406 -106536126 + AT_rich Low_complexity Low_complexity 1 23 0 236 325 122 0 chr5 96549804 96549927 -106535605 + MIR3 SINE MIR 44 181 -27 340 295 147 28 chr5 96550096 96550325 -106535207 + MIR SINE MIR 7 259 -3 2216 137 65 87 chr5 96550360 96550833 -106534699 - MER101 LTR ERV1 -1 473 11 188 286 82 0 chr5 96550884 96550933 -106534599 + MIR SINE MIR 38 90 -118 727 178 31 0 chr5 96550972 96551101 -106534431 - FLAM_A SINE Alu 0 133 1 21 57 0 0 chr5 96551395 96551430 -106534102 + AT_rich Low_complexity Low_complexity 1 35 0 247 238 16 5 chr5 96552228 96552302 -106533230 - MER102b DNA MER1_type -6 335 276 182 250 0 15 chr5 96552807 96552875 -106532657 + GA-rich Low_complexity Low_complexity 2 68 0 180 111 0 0 chr5 96553234 96553261 -106532271 + (T)n Simple_repeat Simple_repeat 1 27 0 197 286 54 88 chr5 96553993 96554140 -106531392 - L2 LINE L2 -1330 1984 1843 196 88 0 88 chr5 96554333 96554367 -106531165 + L2 LINE L2 3227 3257 -15 206 216 20 20 chr5 96554473 96554524 -106531008 + MIR SINE MIR 110 160 -102 3089 256 91 35 chr5 96554608 96555952 -106529580 - L2 LINE L2 -3 3310 1894 1309 294 36 50 chr5 96555956 96556452 -106529080 - L2 LINE L2 -2809 505 17 200 200 125 0 chr5 96557241 96557281 -106528251 - L2 LINE L2 -5 3308 3264 799 298 16 8 chr5 96557583 96557828 -106527704 + MIR SINE MIR 16 262 0 187 338 59 91 chr5 96557889 96558108 -106527424 - L2 LINE L2 -93 3179 2968 612 294 91 17 chr5 96559144 96559375 -106526157 + MIR SINE MIR 15 262 0 486 212 73 60 chr5 96559896 96560047 -106525485 + MER5A DNA MER1_type 37 189 0 235 250 83 0 chr5 96561837 96561897 -106523635 + MIR SINE MIR 186 250 -12 506 295 191 9 chr5 96562145 96562355 -106523177 + MIR SINE MIR 8 255 -7 21 0 0 0 chr5 96562789 96562810 -106522722 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr5 96563275 96563314 -106522218 + AT_rich Low_complexity Low_complexity 1 39 0 5102 153 47 27 chr5 96563314 96563438 -106522094 - L1MA7 LINE L1 -5 6286 6166 279 0 0 0 chr5 96563438 96563469 -106522063 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1919 91 24 28 chr5 96563469 96563756 -106521776 - AluSq SINE Alu -27 286 1 5102 153 47 27 chr5 96563756 96564785 -106520747 - L1MA7 LINE L1 -124 6167 5111 1386 133 40 0 chr5 96564811 96565060 -106520472 + L1MA2 LINE L1 6046 6304 0 608 118 105 46 chr5 96565091 96565244 -106520288 + L1MA8 LINE L1 6119 6280 -11 3001 189 33 3 chr5 96565263 96565875 -106519657 - L1MA7 LINE L1 -1043 5103 4474 916 265 4 17 chr5 96566346 96566580 -106518952 - MIR SINE MIR -24 238 8 2552 53 3 0 chr5 96568505 96568828 -106516704 - L1PA8 LINE L1 -2 6170 5847 1012 296 79 25 chr5 96569776 96570255 -106515277 + L2 LINE L2 2809 3313 0 277 349 47 47 chr5 96570288 96570520 -106515012 + MIR SINE MIR 8 239 -23 22 0 0 0 chr5 96570558 96570580 -106514952 + AT_rich Low_complexity Low_complexity 1 22 0 1748 151 19 32 chr5 96571850 96572162 -106513370 - MER1B DNA MER1_type 0 339 32 327 49 0 0 chr5 96572191 96572232 -106513300 + (TG)n Simple_repeat Simple_repeat 2 42 0 499 361 24 5 chr5 96572372 96572580 -106512952 - MIR SINE MIR -50 212 1 32 0 0 0 chr5 96574235 96574267 -106511265 + AT_rich Low_complexity Low_complexity 1 32 0 230 330 37 28 chr5 96575360 96575469 -106510063 + L2 LINE L2 3192 3301 -12 26 30 0 0 chr5 96576653 96576686 -106508846 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr5 96576790 96576816 -106508716 + AT_rich Low_complexity Low_complexity 1 26 0 219 244 39 77 chr5 96578425 96578503 -106507029 - MIR SINE MIR -64 198 124 26 0 0 0 chr5 96578652 96578678 -106506854 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 96580176 96580200 -106505332 + AT_rich Low_complexity Low_complexity 1 24 0 227 356 10 10 chr5 96580708 96580809 -106504723 - MIR SINE MIR -1 261 161 294 208 0 0 chr5 96580836 96580884 -106504648 - MIR SINE MIR -179 83 36 238 331 38 45 chr5 96581174 96581307 -106504225 + L2 LINE L2 3182 3313 0 665 273 68 89 chr5 96582341 96582667 -106502865 - MER102b DNA MER1_type -12 329 11 191 61 30 0 chr5 96583114 96583147 -106502385 + (TTTAA)n Simple_repeat Simple_repeat 3 36 0 2025 118 3 3 chr5 96583147 96583435 -106502097 - AluSg SINE Alu -22 288 1 399 290 94 0 chr5 96584317 96584455 -106501077 + MIR SINE MIR 34 184 -78 523 0 30 0 chr5 96585322 96585389 -106500143 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 22 80 0 0 chr5 96586345 96586395 -106499137 + AT_rich Low_complexity Low_complexity 1 50 0 21 57 0 0 chr5 96586881 96586916 -106498616 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 96590317 96590345 -106495187 + AT_rich Low_complexity Low_complexity 1 28 0 221 156 44 0 chr5 96591627 96591672 -106493860 + A-rich Low_complexity Low_complexity 5 51 0 334 263 11 0 chr5 96591852 96591947 -106493585 + GA-rich Low_complexity Low_complexity 4 99 0 28 48 0 0 chr5 96593984 96594026 -106491506 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 96595689 96595714 -106489818 + AT_rich Low_complexity Low_complexity 1 25 0 267 206 11 22 chr5 96595954 96596046 -106489486 + GA-rich Low_complexity Low_complexity 2 92 0 318 50 0 0 chr5 96596108 96596148 -106489384 + (A)n Simple_repeat Simple_repeat 1 40 0 31 26 0 0 chr5 96596685 96596723 -106488809 + AT_rich Low_complexity Low_complexity 1 38 0 29 47 0 0 chr5 96596842 96596885 -106488647 + AT_rich Low_complexity Low_complexity 1 43 0 23 54 0 0 chr5 96596918 96596955 -106488577 + AT_rich Low_complexity Low_complexity 1 37 0 863 300 93 48 chr5 96599137 96599611 -106485921 + MARNA DNA Mariner 79 573 -13 201 176 0 0 chr5 96604108 96604142 -106481390 + GA-rich Low_complexity Low_complexity 3 36 0 1704 166 0 40 chr5 96605105 96605406 -106480126 - AluJo SINE Alu -21 291 3 1569 193 10 10 chr5 96606031 96606166 -106479366 + AluJb SINE Alu 1 135 -177 2211 113 3 7 chr5 96606166 96606476 -106479056 + AluSp SINE Alu 1 309 -4 1569 193 10 10 chr5 96606476 96606641 -106478891 + AluJb SINE Alu 134 301 -11 535 237 195 19 chr5 96606736 96606951 -106478581 + MIR SINE MIR 10 262 0 858 138 15 8 chr5 96608112 96608242 -106477290 + FLAM_C SINE Alu 3 133 -10 243 242 0 32 chr5 96609380 96609442 -106476090 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 2055 133 7 0 chr5 96609621 96609922 -106475610 + AluSp SINE Alu 1 303 -10 333 254 87 32 chr5 96611644 96611770 -106473762 - MIR SINE MIR -10 252 120 1981 150 0 10 chr5 96611858 96612172 -106473360 - AluSx SINE Alu 0 312 2 980 281 51 26 chr5 96612468 96612820 -106472712 - L1MEc LINE L1 -5725 671 311 2286 266 55 32 chr5 96612820 96612851 -106472681 + L1MD3 LINE L1 737 766 -5630 778 139 0 0 chr5 96612851 96612997 -106472535 + FLAM_C SINE Alu 2 147 0 2286 266 55 32 chr5 96612997 96613943 -106471589 + L1MD3 LINE L1 766 1739 -4657 5179 217 76 95 chr5 96613955 96616504 -106469028 + L1MD3 LINE L1 3226 5823 -410 854 140 0 0 chr5 96616504 96616640 -106468892 - L1PB1 LINE L1 0 6151 6016 2076 186 9 9 chr5 96616648 96617078 -106468454 - L1MA4 LINE L1 -4 6296 5867 5179 217 76 95 chr5 96617078 96617544 -106467988 + L1MD3 LINE L1 5830 6233 0 536 174 0 70 chr5 96618243 96618358 -106467174 + AluSq/x SINE Alu 1 107 -206 509 306 61 4 chr5 96618852 96619097 -106466435 - L1ME4a LINE L1 -279 5842 5584 24 32 0 0 chr5 96619330 96619361 -106466171 + AT_rich Low_complexity Low_complexity 1 31 0 357 258 86 7 chr5 96619455 96619606 -106465926 - L1ME1 LINE L1 -8 6158 5996 * 1399 208 72 41 chr5 96619599 96620060 -106465472 - L1ME1 LINE L1 -506 5658 5186 780 258 79 7 chr5 96620165 96620456 -106465076 - L1ME1 LINE L1 -968 5178 4867 4637 251 40 24 chr5 96620469 96622474 -106463058 + L1PA13 LINE L1 2 2466 -4331 255 200 275 17 chr5 96622557 96622677 -106462855 - L1PA15-16 LINE L1 -3929 2920 2770 12031 228 14 7 chr5 96622677 96625538 -106459994 - L1PA15 LINE L1 -1070 5076 2198 5314 151 35 20 chr5 96625539 96626634 -106458898 + L1PA15 LINE L1 5058 6165 0 23 0 0 0 chr5 96626636 96626659 -106458873 + AT_rich Low_complexity Low_complexity 1 23 0 1416 215 83 8 chr5 96626659 96627045 -106458487 - L1M4 LINE L1 -1271 4875 4461 386 301 129 5 chr5 96627241 96627450 -106458082 - MARNA DNA Mariner -111 475 241 215 324 14 54 chr5 96627716 96627790 -106457742 - MER5B DNA MER1_type -60 118 48 226 347 21 42 chr5 96627805 96627900 -106457632 + L3b LINE CR1 1488 1580 -3 23 33 0 0 chr5 96628791 96628821 -106456711 + AT_rich Low_complexity Low_complexity 1 30 0 972 157 132 15 chr5 96629583 96629780 -106455752 - AluJo SINE Alu -11 301 82 25 0 0 0 chr5 96631347 96631372 -106454160 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr5 96634809 96634834 -106450698 + (CACG)n Simple_repeat Simple_repeat 2 26 0 2043 138 76 15 chr5 96637527 96637868 -106447664 - THE1B LTR MaLR -2 362 1 10320 107 38 3 chr5 96637868 96639395 -106446137 - THE1B-int LTR MaLR 0 1580 1 2133 128 76 15 chr5 96639395 96639738 -106445794 - THE1B LTR MaLR 0 364 1 427 250 173 6 chr5 96639920 96640088 -106445444 - L2 LINE L2 -773 2541 2346 199 302 48 0 chr5 96640211 96640274 -106445258 - MIR SINE MIR 0 262 197 264 294 0 0 chr5 96640293 96640361 -106445171 + MLT1J LTR MaLR 131 198 -313 27 29 0 0 chr5 96640685 96640719 -106444813 + AT_rich Low_complexity Low_complexity 1 34 0 727 291 85 0 chr5 96642441 96642664 -106442868 + MIR SINE MIR 19 260 -2 4024 154 35 17 chr5 96642756 96643140 -106442392 - L1MA4A LINE L1 0 6303 5927 2493 129 3 3 chr5 96643140 96643503 -106442029 - THE1B LTR MaLR -1 363 1 4024 154 35 17 chr5 96643503 96643892 -106441640 - L1MA4A LINE L1 -376 5927 5516 278 93 0 0 chr5 96643892 96643930 -106441602 + L1P LINE L1 4182 4220 -1922 321 102 0 0 chr5 96643930 96643979 -106441553 + L1PA7 LINE L1 6102 6150 -4 11557 226 49 40 chr5 96643996 96649113 -106436419 - L1 LINE L1 -1520 5328 3 477 293 110 57 chr5 96650232 96650549 -106434983 + LTR16C LTR ERVL 158 491 0 279 322 110 27 chr5 96650615 96650761 -106434771 + MIR3 SINE MIR 42 199 -9 282 234 62 0 chr5 96654874 96654938 -106430594 + MIR SINE MIR 122 189 -73 323 286 52 37 chr5 96655119 96655347 -106430185 + MLT1K LTR MaLR 257 557 -31 22 0 0 0 chr5 96656140 96656162 -106429370 + AT_rich Low_complexity Low_complexity 1 22 0 283 311 0 0 chr5 96658053 96658127 -106427405 - Charlie8 DNA MER1_type 0 2417 2344 2406 74 0 10 chr5 96658932 96659242 -106426290 - AluSg1 SINE Alu -2 307 1 202 269 96 0 chr5 96659267 96659319 -106426213 - MIR SINE MIR -110 152 96 626 204 79 17 chr5 96660290 96660481 -106425051 + MIR SINE MIR 53 262 0 205 316 51 8 chr5 96660496 96660613 -106424919 + MIR SINE MIR 87 208 -54 300 351 29 17 chr5 96660686 96660860 -106424672 + L2 LINE L2 734 909 -2405 663 34 22 11 chr5 96660915 96661004 -106424528 - L1PA7 LINE L1 0 6154 6065 750 266 107 66 chr5 96661093 96661692 -106423840 + L1MB8 LINE L1 269 1224 -5635 9001 215 78 29 chr5 96661736 96663409 -106422123 + L1MB8 LINE L1 3049 4640 -2355 3197 38 15 0 chr5 96663409 96663800 -106421732 - L1PA7 LINE L1 0 6154 5758 9001 215 78 29 chr5 96663800 96664092 -106421440 + L1MB8 LINE L1 4640 4916 -2079 2610 51 0 6 chr5 96664092 96664405 -106421127 + AluY SINE Alu 1 311 0 9001 215 78 29 chr5 96664405 96665794 -106419738 + L1MB8 LINE L1 4916 6569 -426 1912 183 21 24 chr5 96666011 96666433 -106419099 + L1MB8 LINE L1 6563 6983 -6 1005 199 93 9 chr5 96666640 96666856 -106418676 - MLT1E2 LTR MaLR -8 497 264 5452 143 16 8 chr5 96666863 96667939 -106417593 - L1PB3 LINE L1 -3 6151 5068 4481 194 7 6 chr5 96667941 96668909 -106416623 + L1PB3 LINE L1 4091 5059 -1087 1023 228 92 43 chr5 96668922 96669203 -106416329 - MLT1E2 LTR MaLR -331 295 1 2099 94 0 35 chr5 96669383 96669671 -106415861 + AluSq SINE Alu 27 304 -9 1662 149 195 11 chr5 96669743 96669908 -106415624 + MSTA LTR MaLR 17 150 -278 204 40 0 0 chr5 96669908 96669933 -106415599 + (TC)n Simple_repeat Simple_repeat 1 25 0 1662 149 195 11 chr5 96669933 96670115 -106415417 + MSTA LTR MaLR 150 428 0 323 292 25 17 chr5 96671296 96671416 -106414116 - MER5B DNA MER1_type -56 122 2 1211 46 7 0 chr5 96671476 96671628 -106413904 - AluY SINE Alu -2 309 157 223 309 89 8 chr5 96673425 96673548 -106411984 - L2 LINE L2 -223 3049 2917 834 273 19 5 chr5 96673774 96673990 -106411542 - MIR SINE MIR -25 237 19 180 222 56 42 chr5 96674026 96674098 -106411434 - L2 LINE L2 -508 2806 2734 23 33 0 0 chr5 96675100 96675130 -106410402 + AT_rich Low_complexity Low_complexity 1 30 0 2196 124 7 0 chr5 96677818 96678117 -106407415 + AluSx SINE Alu 1 301 -11 264 259 134 18 chr5 96678473 96678585 -106406947 - MIR SINE MIR -88 174 50 29 47 0 0 chr5 96681459 96681502 -106404030 + AT_rich Low_complexity Low_complexity 1 43 0 415 262 60 33 chr5 96682920 96683103 -106402429 + L2 LINE L2 3105 3292 -21 776 229 39 0 chr5 96683623 96683776 -106401756 - MER63A DNA MER1_type -2 208 50 1773 180 38 32 chr5 96684453 96684825 -106400707 - MLT1A2 LTR MaLR 0 374 1 317 308 35 14 chr5 96685878 96686021 -106399511 - MER117 DNA MER1_type -50 147 2 462 380 60 22 chr5 96686439 96686807 -106398725 + L1MEd LINE L1 446 827 -5292 695 304 30 21 chr5 96686834 96687071 -106398461 - MIR SINE MIR -21 241 3 915 207 122 30 chr5 96687090 96687242 -106398290 - MIR SINE MIR -3 259 76 2032 191 8 14 chr5 96687242 96687609 -106397923 - MLT1A1 LTR MaLR 0 365 1 915 207 122 30 chr5 96687609 96687693 -106397839 - MIR SINE MIR -186 76 1 348 297 34 54 chr5 96687703 96687999 -106397533 + L1MEd LINE L1 2240 2529 -3600 319 172 0 78 chr5 96689525 96689589 -106395943 - L1M4 LINE L1 -2593 3553 3495 17272 59 6 2 chr5 96689583 96692611 -106392921 - L1PA5 LINE L1 -2 6152 3118 450 0 0 0 chr5 96693732 96693782 -106391750 + (TAA)n Simple_repeat Simple_repeat 2 51 0 706 209 0 0 chr5 96695250 96695379 -106390153 - FLAM_C SINE Alu -9 134 6 725 195 37 12 chr5 96695914 96696078 -106389454 + L1MA7 LINE L1 5877 6044 -247 345 248 0 18 chr5 96696582 96696691 -106388841 + L1MA9 LINE L1 6160 6266 -46 184 291 18 18 chr5 96697093 96697148 -106388384 + L3 LINE CR1 1488 1542 -35 2646 243 71 82 chr5 96697254 96697854 -106387678 + L1MC4 LINE L1 6725 7330 -665 315 85 0 0 chr5 96697854 96697901 -106387631 - MADE1 DNA Mariner -33 47 1 2646 243 71 82 chr5 96697901 96698597 -106386935 + L1MC4 LINE L1 7330 7995 0 264 220 57 99 chr5 96698711 96698852 -106386680 + MER103 DNA DNA 17 151 -15 390 316 29 47 chr5 96699125 96699168 -106386364 - MIR SINE MIR -94 168 126 1407 77 5 0 chr5 96699168 96699364 -106386168 + L1MA1 LINE L1 6106 6302 0 390 316 29 47 chr5 96699364 96699491 -106386041 - MIR SINE MIR -136 126 1 205 175 0 25 chr5 96700895 96700935 -106384597 + CT-rich Low_complexity Low_complexity 5 43 0 316 205 0 41 chr5 96700992 96701211 -106384321 + AluJo SINE Alu 2 302 0 326 165 25 38 chr5 96701617 96701641 -106383891 - HAL1b LINE L1 -1 1347 1324 400 316 181 18 chr5 96701641 96701977 -106383555 - L1ME4a LINE L1 -32 6089 1270 3472 163 24 15 chr5 96702002 96702659 -106382873 + L1MB3 LINE L1 5520 6182 -1 262 213 0 0 chr5 96702682 96702743 -106382789 - L1P LINE L1 -743 5411 5351 252 268 12 0 chr5 96704408 96704490 -106381042 - L1ME LINE L1 -247 5874 5792 196 148 0 37 chr5 96704722 96704776 -106380756 + (TATG)n Simple_repeat Simple_repeat 3 54 0 33 56 0 0 chr5 96705073 96705127 -106380405 + AT_rich Low_complexity Low_complexity 1 54 0 282 270 6 50 chr5 96705548 96705707 -106379825 + GA-rich Low_complexity Low_complexity 3 154 0 290 356 68 14 chr5 96707494 96707640 -106377892 - MIR3 SINE MIR -51 157 4 334 280 104 48 chr5 96707859 96707980 -106377552 + MIR SINE MIR 26 139 -123 2211 107 3 0 chr5 96707980 96708270 -106377262 + AluSx SINE Alu 4 294 -18 334 280 104 48 chr5 96708270 96708384 -106377148 + MIR SINE MIR 139 261 -1 4462 233 26 8 chr5 96712213 96713631 -106371901 + L1PA13 LINE L1 1319 2781 -4016 709 200 0 14 chr5 96713631 96713771 -106371761 + AluSq/x SINE Alu 1 138 -175 6138 171 33 40 chr5 96713998 96715284 -106370248 + L1P LINE L1 11 1287 -4859 1758 149 16 7 chr5 96715386 96715695 -106369837 + MSTA-int LTR MaLR 1340 1651 0 2121 141 96 15 chr5 96715695 96716091 -106369441 + MSTA LTR MaLR 1 428 0 7378 157 15 131 chr5 96716091 96717838 -106367694 - L1PA15-16 LINE L1 -5019 1830 286 10997 99 4 4 chr5 96717940 96719437 -106366095 - THE1B-int LTR MaLR -83 1497 1 2164 116 51 25 chr5 96719437 96719792 -106365740 - THE1B LTR MaLR 0 364 1 317 254 103 27 chr5 96719801 96720025 -106365507 - L1M4 LINE L1 -1750 4396 4156 6350 209 30 19 chr5 96720167 96721486 -106364046 - MSTA-int LTR MaLR -318 1333 1 * 7349 196 24 13 chr5 96721463 96721486 -106364046 + L1PA15-16 LINE L1 1811 1832 -5017 2088 143 114 5 chr5 96721486 96721872 -106363660 - MSTA LTR MaLR 0 428 1 7349 196 24 13 chr5 96721872 96724383 -106361149 + L1PA15-16 LINE L1 1832 4392 -2457 482 138 0 12 chr5 96724371 96724451 -106361081 + L1PA16 LINE L1 6017 6095 -71 * 777 91 0 0 chr5 96724551 96724672 -106360860 + THE1B-int LTR MaLR 1459 1579 -1 1740 114 129 33 chr5 96724673 96725005 -106360527 + THE1B LTR MaLR 1 364 0 1765 272 114 18 chr5 96725008 96726524 -106359008 + L1ME3 LINE L1 4420 6091 -71 1099 294 62 65 chr5 96726524 96727315 -106358217 + L2 LINE L2 2536 3313 0 329 287 30 79 chr5 96727296 96727460 -106358072 - L2 LINE L2 0 3313 3158 * 25 31 0 0 chr5 96727677 96727709 -106357823 + AT_rich Low_complexity Low_complexity 1 32 0 265 253 200 0 chr5 96728348 96728443 -106357089 - MIR SINE MIR -40 222 109 360 297 65 22 chr5 96728510 96728648 -106356884 + MIR3 SINE MIR 3 146 -62 245 229 0 14 chr5 96728776 96728846 -106356686 + CT-rich Low_complexity Low_complexity 4 72 0 224 209 0 0 chr5 96728907 96728950 -106356582 + T-rich Low_complexity Low_complexity 4 46 0 21 0 0 0 chr5 96729291 96729312 -106356220 + AT_rich Low_complexity Low_complexity 1 21 0 2384 102 6 6 chr5 96729312 96729666 -106355866 - L1PB1 LINE L1 -1 6150 5797 378 85 0 0 chr5 96729666 96729725 -106355807 + (TA)n Simple_repeat Simple_repeat 1 59 0 1246 136 123 47 chr5 96730130 96730366 -106355166 - L1PA15-16 LINE L1 -6594 255 2 1053 279 78 14 chr5 96730391 96730903 -106354629 - L1M4 LINE L1 -2025 4121 3577 798 196 0 0 chr5 96733453 96733591 -106351941 + FLAM_C SINE Alu 1 138 -5 474 268 66 15 chr5 96733993 96734238 -106351294 - L1ME LINE L1 -649 5496 5238 367 258 67 17 chr5 96734769 96734947 -106350585 - L1ME LINE L1 -5932 187 1 12275 210 29 9 chr5 96735907 96737598 -106347934 + L1PA16 LINE L1 2151 3806 -2360 2111 163 80 8 chr5 96737598 96737996 -106347536 + MSTA LTR MaLR 1 427 -1 12275 210 29 9 chr5 96737996 96740235 -106345297 + L1PA16 LINE L1 3806 6166 0 294 29 0 0 chr5 96740269 96740304 -106345228 + (A)n Simple_repeat Simple_repeat 1 35 0 453 261 119 84 chr5 96740491 96740870 -106344662 + MLT1J1 LTR MaLR 51 442 -4 22 0 0 0 chr5 96741611 96741633 -106343899 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 96742976 96742998 -106342534 + AT_rich Low_complexity Low_complexity 1 22 0 2429 63 0 0 chr5 96744256 96744559 -106340973 - AluY SINE Alu -8 303 1 599 41 0 93 chr5 96744985 96745112 -106340420 - L1PA2 LINE L1 0 6155 6068 572 234 143 7 chr5 96745747 96745901 -106339631 - MER69A DNA AcHobo 0 177 3 369 240 42 0 chr5 96748006 96748102 -106337430 - MIR SINE MIR -32 230 131 1737 135 5 137 chr5 96748406 96748768 -106336764 - MLT1B LTR MaLR -2 388 92 1860 151 13 10 chr5 96748768 96749079 -106336453 - AluJb SINE Alu 0 312 1 1737 135 5 137 chr5 96749079 96749154 -106336378 - MLT1B LTR MaLR -298 92 9 599 252 0 0 chr5 96751381 96751504 -106334028 + Charlie2b DNA MER1_type 28 150 -2712 223 259 0 0 chr5 96751578 96751632 -106333900 + (CATA)n Simple_repeat Simple_repeat 3 56 0 920 309 68 28 chr5 96751645 96752072 -106333460 + Charlie2b DNA MER1_type 227 670 -2112 2009 228 83 24 chr5 96752122 96753105 -106332427 + Charlie2a DNA MER1_type 1466 2604 -258 995 191 38 120 chr5 96753123 96753490 -106332042 - L1ME3A LINE L1 -6 6164 5828 320 250 20 0 chr5 96753509 96753609 -106331923 + Charlie2a DNA MER1_type 2694 2795 -67 211 280 0 0 chr5 96753617 96753667 -106331865 + MIR SINE MIR 100 149 -113 1968 105 10 0 chr5 96753680 96754053 -106331479 - L1P5 LINE L1 -614 5537 5161 1379 81 10 5 chr5 96754054 96754252 -106331280 + L1P5 LINE L1 5561 5759 -392 2050 110 17 0 chr5 96755218 96755517 -106330015 - AluSq SINE Alu -9 304 1 424 247 118 56 chr5 96756019 96756197 -106329335 - L2 LINE L2 0 3313 3125 294 239 0 0 chr5 96756389 96756456 -106329076 - MER116 DNA Mariner -13 67 1 281 333 56 80 chr5 96756456 96756795 -106328737 - L2 LINE L2 -549 2765 2435 2550 97 11 3 chr5 96757589 96757950 -106327582 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr5 96758710 96758738 -106326794 + AT_rich Low_complexity Low_complexity 1 28 0 623 273 156 72 chr5 96758748 96759496 -106326036 - L1ME4a LINE L1 -1 6120 5310 593 299 76 47 chr5 96760955 96761149 -106324383 - MLT1K LTR MaLR -15 573 365 1266 269 115 7 chr5 96761149 96761566 -106323966 - LTR40b LTR ERVL 0 462 1 593 299 76 47 chr5 96761566 96761672 -106323860 - MLT1K LTR MaLR -223 365 264 316 341 44 15 chr5 96762356 96762491 -106323041 + MIR3 SINE MIR 31 169 -39 1340 243 75 64 chr5 96764385 96764854 -106320678 + L1M2b LINE L1 7 480 -6729 * 3795 215 29 8 chr5 96764851 96766285 -106319247 + L1M2b LINE L1 2401 3866 -3342 454 104 8 0 chr5 96766282 96766356 -106319176 - L1MC/D LINE L1 -748 5494 5417 * 299 286 7 34 chr5 96766360 96766507 -106319025 - MSTB1-int LTR MaLR -1284 367 225 1412 209 45 22 chr5 96767017 96767375 -106318157 - MSTB1-int LTR MaLR -1283 368 3 2314 158 18 32 chr5 96767377 96767815 -106317717 - MSTB1 LTR MaLR 0 432 1 519 128 0 11 chr5 96767815 96767909 -106317623 + L1MA5 LINE L1 6205 6297 -3 29 47 0 0 chr5 96767909 96767952 -106317580 + AT_rich Low_complexity Low_complexity 1 43 0 2607 255 55 47 chr5 96768181 96770441 -106315091 + L1M3e LINE L1 1 2962 -4144 1985 144 0 7 chr5 96770447 96770753 -106314779 + AluSc SINE Alu 1 304 -5 22 99 0 0 chr5 96770757 96770828 -106314704 + AT_rich Low_complexity Low_complexity 1 71 0 28676 78 9 3 chr5 96771495 96776255 -106309277 - L1PA6 LINE L1 -3 6151 1362 529 168 9 9 chr5 96776378 96776491 -106309041 + CT-rich Low_complexity Low_complexity 1 113 0 1578 158 47 20 chr5 96776491 96776789 -106308743 - AluJo SINE Alu -6 306 1 447 290 131 0 chr5 96778451 96778627 -106306905 - MIR SINE MIR 0 262 64 410 349 23 0 chr5 96779897 96780029 -106305503 - L2 LINE L2 -1 3271 3137 233 246 0 31 chr5 96780101 96780166 -106305366 + GA-rich Low_complexity Low_complexity 4 66 0 207 184 163 0 chr5 96785545 96785594 -106299938 - L2 LINE L2 0 3272 3216 22 0 0 0 chr5 96786323 96786345 -106299187 + AT_rich Low_complexity Low_complexity 1 22 0 238 345 45 9 chr5 96786991 96787101 -106298431 - L3b LINE CR1 -355 1228 1115 213 368 125 0 chr5 96787487 96787623 -106297909 + MIR SINE MIR 64 216 -46 26 30 0 0 chr5 96787645 96787678 -106297854 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr5 96788186 96788230 -106297302 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr5 96788499 96788521 -106297011 + AT_rich Low_complexity Low_complexity 1 22 0 1033 202 0 0 chr5 96791800 96791973 -106293559 - FAM SINE Alu -2 173 1 234 256 78 128 chr5 96792039 96792219 -106293313 + MER5B DNA MER1_type 2 172 -6 192 382 36 0 chr5 96793078 96793188 -106292344 - L3 LINE CR1 -336 1241 1128 206 316 63 0 chr5 96793859 96793938 -106291594 - MIR SINE MIR -63 199 116 2211 107 24 0 chr5 96794508 96794806 -106290726 - AluSx SINE Alu -7 305 1 242 56 28 0 chr5 96795047 96795083 -106290449 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 989 193 0 27 chr5 96846366 96846553 -106238979 - AluJo SINE Alu -126 186 5 2520 79 0 0 chr5 96846969 96847274 -106238258 - AluSg SINE Alu -1 309 5 258 150 17 17 chr5 96847280 96847340 -106238192 + L1MB8 LINE L1 6049 6108 -70 254 134 213 0 chr5 96847387 96847452 -106238080 + L1MB8 LINE L1 6101 6179 -5 1420 143 54 36 chr5 96847563 96847842 -106237690 - L1M2 LINE L1 -692 5608 5325 1229 142 10 20 chr5 96847842 96847993 -106237539 - AluJb SINE Alu -26 286 136 2167 108 3 7 chr5 96847993 96848299 -106237233 - AluSq SINE Alu -8 305 1 1229 142 10 20 chr5 96848299 96848351 -106237181 - AluJb SINE Alu -176 136 85 1182 133 38 5 chr5 96848353 96848564 -106236968 - L1M2 LINE L1 -817 5329 5112 21 0 0 0 chr5 96849706 96849727 -106235805 + GC_rich Low_complexity Low_complexity 1 21 0 287 307 73 40 chr5 96851186 96851336 -106234196 - MARNA DNA Mariner -410 176 22 1863 121 0 29 chr5 96851400 96851707 -106233825 + AluSq SINE Alu 1 298 -15 1870 163 17 0 chr5 96852015 96852309 -106233223 - AluJb SINE Alu -13 299 1 275 240 193 20 chr5 96852345 96852495 -106233037 + LTR33 LTR ERVL 342 517 -4 2286 107 3 0 chr5 96852733 96853032 -106232500 + AluSx SINE Alu 1 300 -12 2021 128 7 3 chr5 96853071 96853361 -106232171 + AluSx SINE Alu 1 291 -21 1477 111 14 5 chr5 96853368 96853575 -106231957 + AluSq SINE Alu 2 210 -103 1210 68 0 0 chr5 96853676 96853822 -106231710 + AluY SINE Alu 156 301 -10 913 200 0 22 chr5 96853825 96854005 -106231527 + FRAM SINE Alu 1 40 0 864 21 0 0 chr5 96854787 96854881 -106230651 + L1PA2 LINE L1 6054 6147 -8 27 0 0 0 chr5 96854881 96854908 -106230624 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 96855056 96855077 -106230455 + AT_rich Low_complexity Low_complexity 1 21 0 2293 56 13 46 chr5 96855217 96855523 -106230009 - AluY SINE Alu -15 296 1 548 307 0 0 chr5 96855566 96855703 -106229829 + MIR SINE MIR 56 192 -70 23 87 0 0 chr5 96855714 96855760 -106229772 + AT_rich Low_complexity Low_complexity 1 46 0 408 20 0 0 chr5 96855802 96855851 -106229681 + (TTA)n Simple_repeat Simple_repeat 1 49 0 1326 85 11 6 chr5 96855851 96856027 -106229505 - AluSg/x SINE Alu -32 278 102 364 163 3 0 chr5 96856027 96856097 -106229435 - Alu SINE Alu -244 56 2 834 122 8 0 chr5 96856111 96856234 -106229298 - AluSg/x SINE Alu -17 295 172 406 227 92 41 chr5 96856424 96856687 -106228845 + LTR33A LTR ERVL 91 430 -93 524 221 74 43 chr5 96856688 96856851 -106228681 - L2 LINE L2 -496 2818 2651 203 250 42 0 chr5 96856992 96857040 -106228492 + L2 LINE L2 3234 3283 -30 2146 106 23 10 chr5 96857040 96857209 -106228323 - AluSx SINE Alu -7 305 129 2145 91 39 3 chr5 96857209 96857495 -106228037 - AluSg1 SINE Alu -13 296 1 2146 106 23 10 chr5 96857495 96857626 -106227906 - AluSx SINE Alu -183 129 1 243 0 0 0 chr5 96857637 96857664 -106227868 + (T)n Simple_repeat Simple_repeat 1 27 0 463 288 86 21 chr5 96858243 96858486 -106227046 + L1M4 LINE L1 4550 4808 -1338 445 276 0 0 chr5 96858493 96858591 -106226941 - MER30 DNA MER1_type -6 224 127 1079 61 23 0 chr5 96859118 96859249 -106226283 - AluY SINE Alu -177 134 1 260 325 12 0 chr5 96859515 96859598 -106225934 - MER91A DNA MER1_type -110 86 3 2351 100 3 0 chr5 96859803 96860114 -106225418 + AluSp SINE Alu 1 312 -1 197 328 255 12 chr5 96860244 96860491 -106225041 - L2 LINE L2 -451 2863 2557 984 181 12 0 chr5 96860514 96860680 -106224852 + AluJb SINE Alu 136 303 -9 1052 92 0 0 chr5 96860682 96860812 -106224720 + AluSq/x SINE Alu 1 130 -182 357 340 144 25 chr5 96860916 96861278 -106224254 - L2 LINE L2 -717 2597 2193 243 264 144 0 chr5 96862830 96863038 -106222494 - L1M4 LINE L1 -831 5315 5078 375 258 67 17 chr5 96863414 96863592 -106221940 - L1MEd LINE L1 -5932 187 1 244 333 57 0 chr5 96864227 96864332 -106221200 - LTR16A LTR ERVL -100 350 240 240 220 17 17 chr5 96864457 96864516 -106221016 - LTR16A1 LTR ERVL -356 101 43 933 338 16 9 chr5 96864917 96865240 -106220292 + LTR16A LTR ERVL 17 341 -109 2691 162 6 43 chr5 96865259 96865729 -106219803 + MLT2B2 LTR ERVL 1 453 -62 616 305 81 5 chr5 96865791 96866014 -106219518 + HERV16-B2 LTR ERVL 5 244 -4752 1030 75 0 15 chr5 96866186 96866320 -106219212 + AluSc SINE Alu 1 132 -177 326 306 49 42 chr5 96866500 96866644 -106218888 + L3 LINE CR1 1224 1368 -209 1452 251 66 62 chr5 96866652 96867137 -106218395 - MLT1J LTR MaLR -15 496 10 1486 166 11 32 chr5 96867183 96867467 -106218065 - MLT1B LTR MaLR 0 390 113 8373 156 7 16 chr5 96867469 96869694 -106215838 - L1PB2 LINE L1 -9 6142 3944 2576 53 0 0 chr5 96869694 96869995 -106215537 + AluY SINE Alu 1 301 -10 8373 156 7 16 chr5 96869995 96870261 -106215271 - L1PB2 LINE L1 -2207 3944 3677 630 183 0 32 chr5 96870262 96870388 -106215144 - MLT1B LTR MaLR -265 125 4 3043 141 11 12 chr5 96870980 96871723 -106213809 + L1MA6 LINE L1 4988 5730 -570 1914 125 139 12 chr5 96871828 96872172 -106213360 + L1MA6 LINE L1 5907 6294 -6 483 269 50 30 chr5 96872236 96872326 -106213206 - L1MC4 LINE L1 -51 7991 7904 219 69 0 0 chr5 96872326 96872355 -106213177 + (CA)n Simple_repeat Simple_repeat 2 30 0 483 269 50 30 chr5 96872355 96872561 -106212971 - L1MC4 LINE L1 -138 7904 7689 362 242 97 57 chr5 96873033 96873157 -106212375 + L2 LINE L2 3185 3313 0 520 252 65 7 chr5 96874387 96874526 -106211006 + MIR SINE MIR 15 161 -101 316 276 79 54 chr5 96874684 96874947 -106210585 + MLT1L LTR MaLR 231 615 0 358 295 0 11 chr5 96874947 96875042 -106210490 + MIR SINE MIR 140 233 -29 23 0 0 0 chr5 96875099 96875122 -106210410 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 96875496 96875517 -106210015 + AT_rich Low_complexity Low_complexity 1 21 0 207 139 0 0 chr5 96876717 96876753 -106208779 + (CA)n Simple_repeat Simple_repeat 1 36 0 2053 142 80 20 chr5 96877434 96877786 -106207746 - THE1C LTR MaLR -2 373 1 21 36 0 0 chr5 96880185 96880213 -106205319 + AT_rich Low_complexity Low_complexity 1 28 0 43140 38 24 1 chr5 96882256 96888271 -106197261 + L1PA2 LINE L1 2 6155 0 21 89 0 0 chr5 96889001 96889057 -106196475 + AT_rich Low_complexity Low_complexity 1 56 0 3919 172 7 28 chr5 96889696 96890400 -106195132 + L1PB4 LINE L1 5467 6155 -1 241 262 16 0 chr5 96890534 96890595 -106194937 + L2 LINE L2 2990 3051 -221 244 333 95 0 chr5 96890758 96890863 -106194669 - L2 LINE L2 -43 3229 3115 44 46 0 0 chr5 96891017 96891082 -106194450 + AT_rich Low_complexity Low_complexity 1 65 0 7051 216 48 23 chr5 96891171 96893842 -106191690 + L1MA4A LINE L1 10 2924 -3924 6701 186 16 12 chr5 96893947 96895107 -106190425 + L1MA4A LINE L1 4598 5752 -1253 2048 96 30 4 chr5 96895107 96895378 -106190154 + AluSg SINE Alu 1 278 -32 216 0 0 0 chr5 96895380 96895404 -106190128 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 6701 186 16 12 chr5 96895404 96896132 -106189400 + L1MA4A LINE L1 5752 6497 -508 189 0 0 0 chr5 96896132 96896153 -106189379 + (CA)n Simple_repeat Simple_repeat 2 22 0 6701 186 16 12 chr5 96896153 96896269 -106189263 + L1MA4A LINE L1 6497 6611 -394 854 167 0 0 chr5 96896273 96896405 -106189127 + AluSx SINE Alu 5 136 -177 2075 141 0 0 chr5 96896405 96896702 -106188830 + AluSx SINE Alu 1 297 -15 467 118 12 0 chr5 96896704 96896789 -106188743 + (TA)n Simple_repeat Simple_repeat 2 87 0 189 0 0 0 chr5 96896792 96896813 -106188719 + (CA)n Simple_repeat Simple_repeat 2 22 0 1169 133 0 0 chr5 96896814 96896979 -106188553 + AluSx SINE Alu 133 297 -15 910 190 21 9 chr5 96896979 96897313 -106188219 + L1MA4A LINE L1 6601 6999 -6 14380 173 7 11 chr5 96897323 96900371 -106185161 + L1PA14 LINE L1 1 3314 -4270 2409 108 30 25 chr5 96900371 96900733 -106184799 - THE1B LTR MaLR 0 364 1 14380 173 7 11 chr5 96900733 96901464 -106184068 + L1PA14 LINE L1 3314 4047 -3537 2390 137 8 0 chr5 96901468 96901827 -106183705 + THE1B LTR MaLR 3 364 0 9000 111 62 63 chr5 96901827 96903409 -106182123 + THE1B-int LTR MaLR 1 1580 0 2340 125 9 5 chr5 96903409 96903754 -106181778 + THE1B LTR MaLR 1 442 -15 13474 190 21 1 chr5 96903754 96907291 -106178241 + L1PA14 LINE L1 4045 7596 -3 471 226 44 19 chr5 96907411 96907570 -106177962 - MER103 DNA DNA 0 166 4 307 220 55 46 chr5 96907598 96907707 -106177825 + L1MC4 LINE L1 1954 2063 -4363 344 232 15 10 chr5 96907717 96907821 -106177711 + L1MC4 LINE L1 1995 6983 -1339 213 333 176 0 chr5 96908150 96908252 -106177280 + MIR3 SINE MIR 71 190 -18 236 132 0 0 chr5 96908295 96908333 -106177199 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 410 278 65 18 chr5 96909641 96909810 -106175722 - MER5B DNA MER1_type -1 177 1 181 313 33 80 chr5 96909934 96910084 -106175448 + L2 LINE L2 2894 3036 -236 459 215 4 24 chr5 96910240 96910373 -106175159 + L1MCa LINE L1 2481 2611 -3815 6959 199 20 13 chr5 96910375 96911971 -106173561 + L1MCa LINE L1 2501 4107 -2319 295 267 48 14 chr5 96912113 96912260 -106173272 + L1MDa LINE L1 1777 2024 -877 25 51 0 0 chr5 96912446 96912485 -106173047 + AT_rich Low_complexity Low_complexity 1 39 0 1763 230 50 6 chr5 96912527 96913032 -106172500 - L1M4 LINE L1 -770 5376 4850 44320 41 0 1 chr5 96913033 96918826 -106166706 + L1P2 LINE L1 1 5791 -364 259 226 0 0 chr5 96918926 96918979 -106166553 - L1 LINE L1 -995 5151 5099 3292 179 35 12 chr5 96918979 96919660 -106165872 + L1MB1 LINE L1 5472 6168 0 237 33 0 0 chr5 96919663 96919693 -106165839 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 253 368 11 0 chr5 96919963 96920058 -106165474 + L2 LINE L2 3192 3287 -26 181 339 16 0 chr5 96920078 96920140 -106165392 + L2 LINE L2 3224 3286 -27 5099 228 35 78 chr5 96920491 96920697 -106164835 - L1MC4a LINE L1 0 7808 7595 2119 143 57 14 chr5 96920697 96921046 -106164486 - THE1B LTR MaLR 0 364 1 5099 228 35 78 chr5 96921046 96922701 -106162831 - L1MC4a LINE L1 -213 7595 6003 1487 235 148 13 chr5 96922935 96923382 -106162150 - MLT1H LTR MaLR 0 549 43 751 102 16 0 chr5 96924963 96925091 -106160441 + (GA)n Simple_repeat Simple_repeat 2 131 0 2030 118 4 0 chr5 96925645 96925965 -106159567 + AluSx SINE Alu 3 323 0 266 311 28 57 chr5 96926432 96926609 -106158923 - MIR SINE MIR -1 261 90 273 128 0 0 chr5 96926629 96926676 -106158856 + (GA)n Simple_repeat Simple_repeat 2 48 0 645 271 83 61 chr5 96927085 96927489 -106158043 + MLT1J LTR MaLR 15 475 -36 383 256 104 56 chr5 96928053 96928322 -106157210 + L1ME4a LINE L1 5746 6027 -94 211 388 10 20 chr5 96928842 96928940 -106156592 + L2 LINE L2 3199 3295 -18 706 217 102 66 chr5 96929241 96929485 -106156047 + MSTD LTR MaLR 6 258 -138 5440 127 23 8 chr5 96929524 96930605 -106154927 + L1PA15 LINE L1 5052 6150 -15 225 0 0 0 chr5 96930606 96930631 -106154901 + (T)n Simple_repeat Simple_repeat 1 25 0 742 193 15 0 chr5 96930641 96930776 -106154756 + MSTD LTR MaLR 260 396 0 1261 201 129 33 chr5 96931005 96931338 -106154194 + MLT1A1 LTR MaLR 1 365 0 387 273 203 4 chr5 96931452 96931679 -106153853 + Charlie7 DNA MER1_type 412 683 -1929 304 150 80 80 chr5 96931689 96931789 -106153743 + Charlie7 DNA MER1_type 2512 2611 -1 24 0 0 0 chr5 96931947 96931971 -106153561 + AT_rich Low_complexity Low_complexity 1 24 0 43 35 0 0 chr5 96932055 96932112 -106153420 + AT_rich Low_complexity Low_complexity 1 57 0 242 120 50 20 chr5 96932112 96932212 -106153320 + (TA)n Simple_repeat Simple_repeat 2 104 0 3059 216 19 35 chr5 96932214 96932992 -106152540 - L1MA9 LINE L1 -38 6274 5509 2227 141 114 0 chr5 96933197 96933573 -106151959 + MSTB LTR MaLR 4 422 -4 453 319 0 14 chr5 96934020 96934161 -106151371 - L3 LINE CR1 -122 1455 1317 22 35 0 0 chr5 96935777 96935806 -106149726 + AT_rich Low_complexity Low_complexity 1 29 0 674 254 103 0 chr5 96935813 96935978 -106149554 - MIR SINE MIR -21 241 60 236 30 30 0 chr5 96936111 96936144 -106149388 + (CAA)n Simple_repeat Simple_repeat 3 36 0 256 382 24 34 chr5 96936152 96936445 -106149087 + L1MEd LINE L1 99 388 -5731 950 257 90 53 chr5 96936537 96937137 -106148395 + L1MEd LINE L1 537 1158 -4961 355 114 13 11 chr5 96937337 96937486 -106148046 + AluSc SINE Alu 84 294 -5 1376 322 61 12 chr5 96937732 96938677 -106146855 + HERV16 LTR ERVL 1750 2811 -2761 37169 64 59 0 chr5 96938681 96944483 -106141049 + L1PA5 LINE L1 2 6153 -1 928 334 25 30 chr5 96944484 96944879 -106140653 + HERV16 LTR ERVL 2769 3199 -1900 344 219 0 0 chr5 96945227 96945291 -106140241 - MIR3 SINE MIR -34 174 111 357 145 0 14 chr5 96945707 96945776 -106139756 + Charlie4 DNA MER1_type 194 261 -1700 296 382 68 25 chr5 96946074 96946354 -106139178 - L2 LINE L2 -439 2875 2584 235 237 59 42 chr5 96946486 96946604 -106138928 - MLT1L LTR MaLR 0 615 496 476 152 36 36 chr5 96946636 96946748 -106138784 + L1ME1 LINE L1 5349 5460 -782 318 258 11 22 chr5 96946760 96946849 -106138683 + HERV16 LTR ERVL 2578 2665 -2331 2764 192 54 70 chr5 96946861 96947178 -106138354 + L1ME1 LINE L1 5428 5749 -417 2294 96 7 0 chr5 96947178 96947481 -106138051 + AluSp SINE Alu 1 305 -8 2764 192 54 70 chr5 96947481 96947909 -106137623 + L1ME1 LINE L1 5749 6161 -5 21 57 0 0 chr5 96948301 96948336 -106137196 + AT_rich Low_complexity Low_complexity 1 35 0 2435 103 11 0 chr5 96950571 96950930 -106134602 - L1PB1 LINE L1 -4 6147 5785 223 218 0 18 chr5 96950931 96950986 -106134546 + (TA)n Simple_repeat Simple_repeat 1 54 0 315 198 10 73 chr5 96950988 96951084 -106134448 + L1MC4 LINE L1 6614 6703 -1339 3627 115 15 8 chr5 96951094 96951778 -106133754 - L1P5 LINE L1 -359 5792 5104 2511 200 15 0 chr5 96951777 96952326 -106133206 + L1P5 LINE L1 4531 5087 -1059 * 2342 81 14 0 chr5 96952397 96952692 -106132840 - AluY SINE Alu -12 299 1 21 0 0 0 chr5 96952695 96952716 -106132816 + AT_rich Low_complexity Low_complexity 1 21 0 311 0 26 0 chr5 96952812 96952851 -106132681 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 23 68 0 0 chr5 96954493 96954537 -106130995 + AT_rich Low_complexity Low_complexity 1 44 0 186 361 26 57 chr5 96955764 96955958 -106129574 - L2 LINE L2 -39 3233 3046 2202 197 49 14 chr5 96956658 96957090 -106128442 - MLT1C LTR MaLR 0 467 21 575 186 129 0 chr5 96957104 96957244 -106128288 + L1M4 LINE L1 4451 4608 -1538 354 277 0 0 chr5 96957249 96957368 -106128164 + (TA)n Simple_repeat Simple_repeat 1 119 0 541 307 33 0 chr5 96957400 96957615 -106127917 + L1M4 LINE L1 4639 4860 -1286 2647 62 13 52 chr5 96957644 96958029 -106127503 - L1PA4 LINE L1 -3 6152 5783 635 215 174 33 chr5 96958140 96958576 -106126956 + Charlie2 DNA MER1_type 2035 2604 -258 972 191 38 120 chr5 96958594 96958961 -106126571 - L1ME3A LINE L1 -6 6164 5828 306 250 20 0 chr5 96958980 96959080 -106126452 + Charlie2 DNA MER1_type 2694 2795 -67 209 280 0 0 chr5 96959088 96959138 -106126394 + MIR SINE MIR 100 149 -113 1964 105 10 0 chr5 96959151 96959524 -106126008 - L1PB3 LINE L1 -614 5537 5161 2470 270 10 58 chr5 96959525 96959724 -106125808 + L1PB3 LINE L1 5561 5768 -386 303 28 0 0 chr5 96959724 96959760 -106125772 + (TA)n Simple_repeat Simple_repeat 2 37 0 2470 270 10 58 chr5 96959760 96960183 -106125349 + L1PB3 LINE L1 5768 6153 -1 21 0 0 0 chr5 96960183 96960204 -106125328 + AT_rich Low_complexity Low_complexity 1 21 0 224 209 0 0 chr5 96960545 96960588 -106124944 + A-rich Low_complexity Low_complexity 4 46 0 245 229 0 14 chr5 96960649 96960719 -106124813 + GA-rich Low_complexity Low_complexity 4 72 0 360 297 65 22 chr5 96960847 96960985 -106124547 - MIR3 SINE MIR -62 146 3 265 253 200 0 chr5 96961052 96961147 -106124385 + MIR SINE MIR 109 222 -40 25 31 0 0 chr5 96961786 96961818 -106123714 + AT_rich Low_complexity Low_complexity 1 32 0 329 287 30 79 chr5 96962035 96962199 -106123333 + L2 LINE L2 3158 3313 0 * 1099 294 62 65 chr5 96962180 96962971 -106122561 - L2 LINE L2 0 3313 2536 1871 270 116 16 chr5 96962978 96964485 -106121047 - L1ME3A LINE L1 -83 6087 4420 1819 114 123 33 chr5 96964488 96964822 -106120710 - THE1B LTR MaLR 0 364 1 10536 94 4 87 chr5 96964823 96966544 -106118988 - THE1B-int LTR MaLR -1 1579 1 2184 118 48 25 chr5 96966544 96966900 -106118632 - THE1B LTR MaLR 0 364 1 317 254 103 27 chr5 96966909 96967133 -106118399 - L1ME3A LINE L1 -1750 4396 4156 910 134 0 7 chr5 96967147 96967289 -106118243 - L1PA16 LINE L1 -9 6157 6017 16660 177 25 60 chr5 96967289 96969788 -106115744 - L1PA15-16 LINE L1 -2466 4383 1798 2088 143 114 5 chr5 96969788 96970174 -106115358 + MSTA LTR MaLR 1 428 0 8173 195 24 16 chr5 96970174 96971813 -106113719 + MSTA-int LTR MaLR 1 1651 0 2201 138 88 15 chr5 96971813 96972212 -106113320 + MSTA LTR MaLR 1 428 0 16660 177 25 60 chr5 96972212 96974231 -106111301 - L1PA15-16 LINE L1 -5048 1801 2 1053 279 78 14 chr5 96974256 96974768 -106110764 - L1ME3A LINE L1 -2025 4121 3577 798 196 0 0 chr5 96977318 96977456 -106108076 + FLAM_C SINE Alu 1 138 -5 193 270 11 67 chr5 96978146 96978235 -106107297 - MIR SINE MIR -177 85 2 344 222 68 60 chr5 96978269 96978386 -106107146 - L1ME4a LINE L1 -15 6106 5989 309 26 0 0 chr5 96978482 96978520 -106107012 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1610 104 5 9 chr5 96978532 96978754 -106106778 - AluSx SINE Alu -53 259 39 594 316 130 44 chr5 96978758 96979620 -106105912 - L1ME4a LINE L1 -278 5843 4911 26 30 0 0 chr5 96979798 96979831 -106105701 + AT_rich Low_complexity Low_complexity 1 33 0 2750 203 59 20 chr5 96980314 96980909 -106104623 + MLT1E3 LTR MaLR 7 624 0 21 57 0 0 chr5 96982576 96982611 -106102921 + AT_rich Low_complexity Low_complexity 1 35 0 578 282 27 0 chr5 96983327 96983476 -106102056 - MIR SINE MIR -43 219 67 202 198 22 44 chr5 96983709 96983800 -106101732 + A-rich Low_complexity Low_complexity 3 91 0 307 289 41 0 chr5 96983866 96983963 -106101569 + MER94 DNA DNA 1 101 -33 21 0 0 0 chr5 96986545 96986566 -106098966 + AT_rich Low_complexity Low_complexity 1 21 0 444 104 0 0 chr5 96986616 96986683 -106098849 + (CA)n Simple_repeat Simple_repeat 2 68 0 23 0 0 0 chr5 96989759 96989782 -106095750 + AT_rich Low_complexity Low_complexity 1 23 0 190 164 36 0 chr5 96990231 96990286 -106095246 + (TG)n Simple_repeat Simple_repeat 2 58 0 24 0 0 0 chr5 96991035 96991059 -106094473 + AT_rich Low_complexity Low_complexity 1 24 0 206 299 88 29 chr5 96992168 96992305 -106093227 - L2 LINE L2 -22 3291 3147 253 277 83 51 chr5 96992329 96992487 -106093045 - MIR3 SINE MIR -80 128 13 268 284 88 62 chr5 96993339 96993533 -106091999 + MLT2F LTR ERVL 30 228 -435 * 758 283 108 3 chr5 96993531 96993817 -106091715 + MLT2F LTR ERVL 348 663 0 959 240 94 51 chr5 96993831 96993913 -106091619 + MLT1A1 LTR MaLR 1 78 -287 2292 121 27 21 chr5 96993913 96994286 -106091246 + THE1C LTR MaLR 1 375 0 959 240 94 51 chr5 96994286 96994553 -106090979 + MLT1A1 LTR MaLR 78 365 0 1774 214 48 3 chr5 96994697 96995076 -106090456 + MSTD LTR MaLR 1 396 0 710 245 19 39 chr5 96995115 96995323 -106090209 - MIR SINE MIR -58 204 1 285 193 14 14 chr5 96995348 96995431 -106090101 - MLT1J2 LTR MaLR -18 428 309 384 216 10 10 chr5 96995525 96995622 -106089910 - MLT1J2 LTR MaLR -275 175 79 1606 281 145 55 chr5 96995924 96996502 -106089030 - HAL1 LINE L1 -611 1896 1372 327 25 0 0 chr5 96996502 96996542 -106088990 + (TC)n Simple_repeat Simple_repeat 1 40 0 1717 166 4 0 chr5 96996543 96996821 -106088711 - AluJb SINE Alu -33 279 1 1606 281 145 55 chr5 96996821 96997132 -106088400 - HAL1 LINE L1 -1135 1372 1091 195 42 0 0 chr5 96997132 96997156 -106088376 + (TC)n Simple_repeat Simple_repeat 1 24 0 1606 281 145 55 chr5 96997156 96997766 -106087766 - HAL1 LINE L1 -1416 1091 258 276 341 129 8 chr5 96997992 96998124 -106087408 + L2 LINE L2 3106 3253 -19 3328 101 11 0 chr5 96998212 96998687 -106086845 - L1PA13 LINE L1 -4 6159 5680 841 86 5 183 chr5 96998689 96998886 -106086646 + L1P4 LINE L1 5563 5724 -444 290 342 155 39 chr5 96999877 97000552 -106084980 - L2 LINE L2 -21 3251 2459 1265 145 20 35 chr5 97000552 97000807 -106084725 + L1MB2 LINE L1 5906 6156 -15 1919 179 17 6 chr5 97000979 97001337 -106084195 + MLT1A1 LTR MaLR 4 365 0 26 0 0 0 chr5 97001515 97001541 -106083991 + AT_rich Low_complexity Low_complexity 1 26 0 2105 97 39 0 chr5 97002343 97002622 -106082910 + AluY SINE Alu 1 290 -21 8231 30 2 0 chr5 97002699 97004447 -106081085 + L1PA4 LINE L1 4403 6152 -3 24 0 0 0 chr5 97004447 97004471 -106081061 + AT_rich Low_complexity Low_complexity 1 24 0 554 265 76 25 chr5 97006021 97006308 -106079224 + MLT1I LTR MaLR 102 448 -2 456 51 0 0 chr5 97008374 97008433 -106077099 + (A)n Simple_repeat Simple_repeat 1 59 0 1065 213 155 29 chr5 97008945 97009320 -106076212 - MLT1D LTR MaLR 0 505 84 213 132 0 0 chr5 97010260 97010298 -106075234 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 297 268 137 60 chr5 97010393 97010561 -106074971 - MIR SINE MIR -53 209 29 186 321 70 37 chr5 97011127 97011342 -106074190 - L2 LINE L2 -212 3060 2839 505 281 39 28 chr5 97011554 97011732 -106073800 + MLT1L LTR MaLR 215 394 -221 263 271 34 17 chr5 97011787 97011905 -106073627 + MLT1L LTR MaLR 489 608 -7 1660 175 0 14 chr5 97011984 97012281 -106073251 - AluJo SINE Alu 0 312 20 199 313 88 40 chr5 97012829 97013056 -106072476 - L2 LINE L2 -831 2483 2246 262 312 87 39 chr5 97013166 97013397 -106072135 - MIR SINE MIR -14 248 7 2158 118 150 5 chr5 97013951 97014325 -106071207 - MSTA LTR MaLR 0 428 1 257 333 38 30 chr5 97014422 97014554 -106070978 - L2 LINE L2 -2 3270 3138 30008 111 19 63 chr5 97016001 97021637 -106063895 + L1P LINE L1 12 5401 -745 2359 50 25 16 chr5 97021611 97021930 -106063602 - L1PA7 LINE L1 -315 5839 5518 * 2618 143 26 5 chr5 97022121 97022540 -106062992 + MSTA LTR MaLR 1 428 0 811 229 109 0 chr5 97023413 97023605 -106061927 - MER58A DNA MER1_type -11 213 1 25 51 0 0 chr5 97024434 97024473 -106061059 + AT_rich Low_complexity Low_complexity 1 39 0 222 263 88 0 chr5 97024477 97024534 -106060998 + L2 LINE L2 3234 3295 -18 213 250 194 16 chr5 97025165 97025289 -106060243 + MER5A DNA MER1_type 44 189 0 521 305 132 18 chr5 97025373 97025812 -106059720 + MARNA DNA Mariner 50 538 -48 1925 148 146 11 chr5 97026174 97026551 -106058981 - MSTA LTR MaLR 0 428 1 8638 146 18 43 chr5 97026551 97028163 -106057369 - MSTA-int LTR MaLR 0 1580 10 47 86 0 0 chr5 97028194 97028311 -106057221 + AT_rich Low_complexity Low_complexity 1 117 0 1514 176 178 22 chr5 97028325 97028514 -106057018 - MSTA LTR MaLR 0 428 270 189 0 0 0 chr5 97028514 97028535 -106056997 + (GA)n Simple_repeat Simple_repeat 1 21 0 1514 176 178 22 chr5 97028535 97028715 -106056817 - MSTA LTR MaLR -158 270 1 309 302 79 40 chr5 97028936 97029062 -106056470 + MIR SINE MIR 3 133 -129 216 158 0 0 chr5 97029110 97029148 -106056384 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1089 210 17 0 chr5 97029163 97029396 -106056136 - Tigger2a DNA MER2_type -1 443 207 1533 196 7 24 chr5 97029396 97029687 -106055845 + AluJo SINE Alu 6 291 -21 825 115 44 9 chr5 97029692 97029918 -106055614 + GA-rich Low_complexity Low_complexity 1 234 0 968 156 63 55 chr5 97029918 97030155 -106055377 - Tigger2a DNA MER2_type -195 239 1 291 340 19 0 chr5 97030220 97030326 -106055206 - L2 LINE L2 -248 3024 2917 385 259 223 0 chr5 97030723 97030862 -106054670 + MIR SINE MIR 84 253 -9 187 405 0 0 chr5 97031246 97031325 -106054207 + MIR SINE MIR 33 111 -97 677 316 6 63 chr5 97031325 97031568 -106053964 + MIR SINE MIR 10 235 -27 252 246 88 79 chr5 97031584 97031698 -106053834 + MIR SINE MIR 98 212 -50 2364 88 0 28 chr5 97032667 97032985 -106052547 - AluY SINE Alu 0 311 3 24 0 0 0 chr5 97033886 97033910 -106051622 + AT_rich Low_complexity Low_complexity 1 24 0 2521 74 0 6 chr5 97034664 97034976 -106050556 + AluY SINE Alu 1 310 -1 1564 218 27 17 chr5 97034986 97035398 -106050134 + L1ME1 LINE L1 5730 6145 -21 191 296 0 42 chr5 97035491 97035562 -106049970 + L2 LINE L2 2992 3059 -213 2139 82 21 0 chr5 97035793 97036075 -106049457 - AluSg SINE Alu -22 288 1 209 192 0 58 chr5 97036391 97036443 -106049089 + L2 LINE L2 3264 3312 -1 214 148 0 56 chr5 97037363 97037417 -106048115 + (GGA)n Simple_repeat Simple_repeat 1 51 0 204 40 0 0 chr5 97037485 97037510 -106048022 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 287 48 0 24 chr5 97037780 97037822 -106047710 + (CCCCCG)n Simple_repeat Simple_repeat 2 42 0 378 0 0 0 chr5 97038247 97038289 -106047243 + (CA)n Simple_repeat Simple_repeat 1 42 0 213 94 0 0 chr5 97038508 97038540 -106046992 + (CA)n Simple_repeat Simple_repeat 2 33 0 200 118 29 0 chr5 97038719 97038753 -106046779 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 143 0 0 chr5 97038930 97038965 -106046567 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 183 129 0 0 chr5 97040191 97040222 -106045310 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr5 97041096 97041119 -106044413 + AT_rich Low_complexity Low_complexity 1 23 0 602 307 17 39 chr5 97045318 97045549 -106039983 - MIR SINE MIR -34 228 3 442 274 111 58 chr5 97045711 97045937 -106039595 + MIR SINE MIR 25 262 0 194 232 54 0 chr5 97046153 97046209 -106039323 - L2 LINE L2 -70 3243 3185 398 276 107 68 chr5 97046372 97046698 -106038834 - HAL1 LINE L1 0 2507 2169 1372 293 82 30 chr5 97047150 97048048 -106037484 - HAL1 LINE L1 -604 1903 959 276 273 55 44 chr5 97048146 97048329 -106037203 - HAL1 LINE L1 -1559 948 764 263 374 28 0 chr5 97049425 97049532 -106036000 + L2 LINE L2 3160 3269 -3 342 0 0 0 chr5 97052426 97052464 -106033068 + (TG)n Simple_repeat Simple_repeat 1 38 0 255 181 31 131 chr5 97052993 97053118 -106032414 - MLT1J2 LTR MaLR -292 155 42 338 297 55 8 chr5 97054164 97054292 -106031240 + MER20 DNA MER1_type 86 219 0 1538 160 20 108 chr5 97054599 97054999 -106030533 + MLT1A1 LTR MaLR 1 365 0 463 185 93 0 chr5 97055218 97055326 -106030206 + L1MC4 LINE L1 6960 7077 -965 1495 243 89 55 chr5 97055331 97055653 -106029879 + L1MC4 LINE L1 7213 7523 -519 2214 87 0 0 chr5 97055653 97055930 -106029602 + AluSc SINE Alu 1 277 -32 225 0 0 0 chr5 97055930 97055955 -106029577 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1495 243 89 55 chr5 97055955 97056262 -106029270 + L1MC4 LINE L1 7522 7897 -145 222 37 0 0 chr5 97056266 97056293 -106029239 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 280 200 0 0 chr5 97056298 97056353 -106029179 + L1MD3 LINE L1 7926 7980 -15 372 380 37 21 chr5 97056363 97056550 -106028982 - L2 LINE L2 -12 3260 3071 2286 102 3 0 chr5 97056734 97057037 -106028495 + AluSp SINE Alu 3 306 -7 3816 240 57 6 chr5 97057205 97057938 -106027594 - L1PA15 LINE L1 0 6165 5395 242 311 118 22 chr5 97057975 97058110 -106027422 - MIR SINE MIR -56 206 59 182 304 71 45 chr5 97058627 97058739 -106026793 - MIR SINE MIR -60 202 88 7239 48 0 0 chr5 97058993 97059916 -106025616 - L1PA5 LINE L1 -5 6149 5227 714 211 92 0 chr5 97060447 97060515 -106025017 - MER69 DNA AcHobo 0 2526 2466 2333 87 0 3 chr5 97060515 97060815 -106024717 + AluSc SINE Alu 1 299 -10 714 211 92 0 chr5 97060815 97060964 -106024568 - MER69 DNA AcHobo -60 2466 2289 * 877 242 61 23 chr5 97060958 97061222 -106024310 - MER69 DNA AcHobo -776 450 177 285 333 104 15 chr5 97061892 97062027 -106023505 + L2 LINE L2 3126 3272 0 58 90 0 0 chr5 97062962 97063118 -106022414 + AT_rich Low_complexity Low_complexity 1 156 0 18527 90 15 6 chr5 97063191 97066740 -106018792 - L1PA7 LINE L1 0 6469 2880 11433 117 31 26 chr5 97066742 97068704 -106016828 - L1PA7 LINE L1 -4459 2002 2 1891 209 86 30 chr5 97068704 97069206 -106016326 - MER44D DNA MER2_type -17 588 4 4514 187 37 29 chr5 97069209 97069816 -106015716 - L1MC3 LINE L1 -26 7782 7171 2237 108 7 7 chr5 97069816 97070122 -106015410 + AluSq SINE Alu 1 306 -7 4514 187 37 29 chr5 97070122 97070594 -106014938 - L1MC3 LINE L1 -637 7171 6705 311 168 28 122 chr5 97070595 97070702 -106014830 + AluSc SINE Alu 200 296 -3 1798 164 3 3 chr5 97070719 97071029 -106014503 - L1MC3 LINE L1 -1867 5918 5609 3455 106 11 23 chr5 97071037 97071557 -106013975 - L1PA11 LINE L1 0 6174 5661 1527 195 11 3 chr5 97071557 97071867 -106013665 + AluJb SINE Alu 1 312 0 2336 38 67 32 chr5 97071897 97072212 -106013320 - LTR17 LTR ERV1 -454 326 1 2045 68 0 0 chr5 97072212 97072464 -106013068 - HERV17 LTR ERV1 0 8626 8375 3635 78 43 21 chr5 97072494 97073008 -106012524 - LTR17 LTR ERV1 0 780 256 2309 67 3 0 chr5 97073008 97073305 -106012227 - L1P4 LINE L1 -498 5676 5379 928 182 18 6 chr5 97073316 97073486 -106012046 - L1MC3 LINE L1 -2187 5598 5427 27 29 0 0 chr5 97074455 97074489 -106011043 + AT_rich Low_complexity Low_complexity 1 34 0 916 205 173 37 chr5 97074571 97074946 -106010586 - L1ME3A LINE L1 -1 6169 5744 437 279 114 0 chr5 97074994 97075195 -106010337 - L1ME LINE L1 -374 5796 5573 380 229 134 58 chr5 97075358 97075581 -106009951 - L1ME LINE L1 -671 5493 5254 785 273 113 28 chr5 97075782 97075900 -106009632 - L1ME LINE L1 -1159 4987 4880 800 41 179 0 chr5 97075900 97076023 -106009509 + L1MA3 LINE L1 6160 6304 -1 785 273 113 28 chr5 97076023 97076398 -106009134 - L1ME LINE L1 -1266 4880 4452 712 44 142 18 chr5 97076672 97076785 -106008747 + L1MA3 LINE L1 6178 6304 -1 2485 281 102 23 chr5 97076799 97078198 -106007334 - L1MC3 LINE L1 -1288 4858 3349 1244 129 31 13 chr5 97078200 97078425 -106007107 - MER46A DNA MER2_type -6 230 2 2218 224 60 29 chr5 97078703 97078964 -106006568 - L1ME2 LINE L1 -14 6150 5890 495 271 161 36 chr5 97078964 97079410 -106006122 - L1MA7 LINE L1 -404 5887 5386 2690 226 105 44 chr5 97079588 97080113 -106005419 + L1MEc LINE L1 196 688 -5708 6650 145 51 0 chr5 97080113 97081283 -106004249 - Tigger3b DNA MER2_type 0 1231 2 2690 226 105 44 chr5 97081283 97081728 -106003804 + L1MEc LINE L1 688 1225 -5171 1356 221 224 31 chr5 97082290 97082521 -106003011 - L1ME2 LINE L1 -744 5402 5217 1719 109 106 0 chr5 97082521 97082806 -106002726 + AluSx SINE Alu 1 312 0 1356 221 224 31 chr5 97082806 97083216 -106002316 - L1ME2 LINE L1 -929 5217 4636 196 239 0 0 chr5 97083630 97083676 -106001856 + MIR SINE MIR 108 153 -55 1057 241 65 20 chr5 97083776 97084129 -106001403 + MER113 DNA MER1_type? 67 435 -86 551 280 46 6 chr5 97085380 97085555 -105999977 + MIR3 SINE MIR 22 203 -5 448 222 127 11 chr5 97086087 97086276 -105999256 - L1ME2 LINE L1 -1599 4547 4337 229 290 97 11 chr5 97086357 97086543 -105998989 - L1MC3 LINE L1 -2885 3261 3060 327 261 63 0 chr5 97086601 97086743 -105998789 - L1MC3 LINE L1 -3211 2935 2785 2048 129 0 36 chr5 97086760 97087069 -105998463 - AluSq SINE Alu -13 300 3 284 216 29 78 chr5 97087083 97087185 -105998347 - L1MC3 LINE L1 -3327 2819 2723 355 42 21 0 chr5 97087185 97087233 -105998299 + MLT2A1 LTR ERVL 1 49 -395 849 188 11 21 chr5 97087275 97087461 -105998071 - LTR2 LTR ERV1 0 449 266 287 251 18 94 chr5 97087457 97087628 -105997904 - LTR2 LTR ERV1 -289 160 3 * 382 162 0 0 chr5 97087630 97087704 -105997828 - Harlequin LTR ERV1 -1 6895 6822 330 229 0 0 chr5 97087700 97087761 -105997771 - Harlequin LTR ERV1 -1369 5527 5467 * 539 176 0 0 chr5 97087763 97087854 -105997678 - HERVE LTR ERV1 -1808 6005 5915 11805 68 9 1 chr5 97087891 97089384 -105996148 - HERVE LTR ERV1 -1991 5822 4318 328 259 0 0 chr5 97089898 97089979 -105995553 + L1M3d LINE L1 2 82 -5809 496 234 21 50 chr5 97090013 97090154 -105995378 + L2 LINE L2 3175 3311 -2 2504 53 3 3 chr5 97090330 97090633 -105994899 + AluY SINE Alu 1 303 -8 393 22 0 0 chr5 97090636 97090682 -105994850 + (TA)n Simple_repeat Simple_repeat 1 46 0 183 42 0 0 chr5 97090880 97090904 -105994628 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3272 187 13 3 chr5 97092640 97093277 -105992255 - L1PA16 LINE L1 -6 6160 5518 336 302 18 41 chr5 97093289 97093458 -105992074 + MARNA DNA Mariner 316 480 -106 33 0 0 0 chr5 97093999 97094032 -105991500 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 97096866 97096887 -105988645 + AT_rich Low_complexity Low_complexity 1 21 0 855 135 8 0 chr5 97096960 97097086 -105988446 + FLAM_C SINE Alu 1 127 -16 284 333 95 24 chr5 97100043 97100211 -105985321 + MIR SINE MIR 77 256 -6 626 277 81 1 chr5 97100670 97100868 -105984664 - MIR SINE MIR -10 252 40 395 264 66 54 chr5 97101005 97101263 -105984269 + L1MC4 LINE L1 7741 8001 -41 330 349 40 14 chr5 97101831 97102041 -105983491 - MIR SINE MIR -27 235 21 495 0 0 0 chr5 97102397 97102452 -105983080 + (TA)n Simple_repeat Simple_repeat 1 55 0 42 86 0 0 chr5 97104028 97104133 -105981399 + AT_rich Low_complexity Low_complexity 1 105 0 22 0 0 0 chr5 97104595 97104617 -105980915 + AT_rich Low_complexity Low_complexity 1 22 0 180 219 333 31 chr5 97106562 97106658 -105978874 - MIR SINE MIR -6 256 132 221 0 35 0 chr5 97106673 97106702 -105978830 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2215 89 0 10 chr5 97106707 97106842 -105978690 + AluSq SINE Alu 1 136 -177 2210 76 3 0 chr5 97106842 97107132 -105978400 + AluY SINE Alu 2 292 -19 2215 89 0 10 chr5 97107132 97107300 -105978232 + AluSq SINE Alu 136 301 -12 312 266 55 18 chr5 97107324 97107433 -105978099 - MIR SINE MIR -137 125 13 1214 168 48 0 chr5 97107572 97107781 -105977751 - MER46B DNA MER2_type -142 94 1 541 298 50 11 chr5 97108671 97108852 -105976680 + MIR SINE MIR 1 188 -74 22 56 0 0 chr5 97109003 97109039 -105976493 + AT_rich Low_complexity Low_complexity 1 36 0 615 295 172 42 chr5 97109089 97109536 -105975996 + HAL1 LINE L1 355 859 -1648 832 213 76 15 chr5 97109542 97109739 -105975793 - MER58C DNA MER1_type -1 214 6 203 263 0 13 chr5 97109882 97109958 -105975574 + (TA)n Simple_repeat Simple_repeat 2 76 0 1145 228 130 45 chr5 97109959 97110124 -105975408 + HAL1 LINE L1 980 1130 -1377 2043 101 13 41 chr5 97110124 97110442 -105975090 + AluSq SINE Alu 3 311 -2 1145 228 130 45 chr5 97110442 97110986 -105974546 + HAL1 LINE L1 1130 1749 -758 1580 185 14 4 chr5 97111190 97111471 -105974061 + AluSx SINE Alu 1 284 -28 33 43 0 0 chr5 97111949 97111996 -105973536 + AT_rich Low_complexity Low_complexity 1 47 0 1485 191 42 17 chr5 97114621 97114909 -105970623 + AluJo SINE Alu 1 295 -17 362 271 138 108 chr5 97115383 97115752 -105969780 + HAL1 LINE L1 5 384 -2123 982 171 0 6 chr5 97115753 97115911 -105969621 + FRAM SINE Alu 1 155 -21 430 224 274 22 chr5 97115916 97116139 -105969393 + HAL1 LINE L1 10 288 -2219 245 156 22 0 chr5 97116326 97116371 -105969161 + HAL1 LINE L1 443 488 -2019 1042 235 61 121 chr5 97116393 97116908 -105968624 + HAL1 LINE L1 775 1278 -1229 252 191 0 0 chr5 97116908 97116950 -105968582 - 5S rRNA rRNA -79 42 1 1042 235 61 121 chr5 97116950 97117128 -105968404 + HAL1 LINE L1 1278 1465 -1042 489 150 30 10 chr5 97117149 97117350 -105968182 + AluJb SINE Alu 1 301 -11 1104 292 85 20 chr5 97117350 97117798 -105967734 + HAL1 LINE L1 1481 1957 -550 583 277 60 31 chr5 97117806 97118208 -105967324 + HAL1 LINE L1 1240 2424 -83 909 218 184 42 chr5 97118315 97118673 -105966859 + HAL1 LINE L1 1549 1957 -550 377 247 75 7 chr5 97118715 97118861 -105966671 + HAL1 LINE L1 2057 2212 -295 332 279 123 28 chr5 97118895 97119074 -105966458 + HAL1 LINE L1 2309 2504 -3 240 35 0 0 chr5 97119367 97119396 -105966136 + (A)n Simple_repeat Simple_repeat 1 29 0 1801 129 73 0 chr5 97119884 97120156 -105965376 + AluSx SINE Alu 4 295 -17 1587 171 0 0 chr5 97120762 97121013 -105964519 - AluJb SINE Alu -61 251 1 222 320 154 39 chr5 97121821 97121977 -105963555 + MIR SINE MIR 63 236 -26 2432 66 0 7 chr5 97122251 97122555 -105962977 + AluY SINE Alu 1 302 -9 368 276 141 29 chr5 97122847 97123017 -105962515 + MER5A DNA MER1_type 1 189 0 22 35 0 0 chr5 97123061 97123090 -105962442 + AT_rich Low_complexity Low_complexity 1 29 0 2137 153 25 55 chr5 97123318 97123605 -105961927 + Tigger2a DNA MER2_type 1 272 -2436 2561 52 0 0 chr5 97123605 97123912 -105961620 - AluY SINE Alu -4 307 1 2137 153 25 55 chr5 97123912 97124063 -105961469 + Tigger2a DNA MER2_type 272 426 -8 542 198 10 0 chr5 97125139 97125235 -105960297 - FLAM_A SINE Alu -45 97 1 900 200 19 65 chr5 97125480 97125695 -105959837 + AluJo SINE Alu 1 205 -107 694 232 0 7 chr5 97125696 97125834 -105959698 + AluJb SINE Alu 145 281 -31 430 254 60 67 chr5 97125888 97126093 -105959439 + MIR SINE MIR 7 216 -46 190 359 0 26 chr5 97126487 97126565 -105958967 - MIR3 SINE MIR -5 203 128 305 268 56 28 chr5 97126641 97126783 -105958749 - MIR3 SINE MIR -24 184 39 605 229 0 0 chr5 97128412 97128530 -105957002 - FLAM_C SINE Alu -15 118 1 1247 239 40 3 chr5 97128560 97128861 -105956671 + AluJb SINE Alu 1 312 0 371 220 386 5 chr5 97128872 97129095 -105956437 + L1MC5 LINE L1 7600 7907 -54 1611 264 103 59 chr5 97129377 97130085 -105955447 + MER21B LTR ERV1 1 739 -124 214 336 37 9 chr5 97130118 97130225 -105955307 + L2 LINE L2 3195 3304 -9 2908 168 61 80 chr5 97130365 97131024 -105954508 + MER82 DNA MER2_type 2 647 -6 2243 93 0 3 chr5 97131216 97131517 -105954015 - AluY SINE Alu -11 300 1 579 322 167 7 chr5 97131720 97132288 -105953244 - L2 LINE L2 0 3313 2647 413 340 170 0 chr5 97132289 97132536 -105952996 - L2 LINE L2 -792 2522 2234 331 359 127 6 chr5 97132943 97133124 -105952408 - L2 LINE L2 -1935 1379 1177 878 155 0 0 chr5 97133426 97133555 -105951977 + FLAM_C SINE Alu 1 129 -14 1261 228 28 25 chr5 97134014 97134378 -105951154 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr5 97135373 97135396 -105950136 + AT_rich Low_complexity Low_complexity 1 23 0 259 289 105 26 chr5 97135678 97135792 -105949740 + MIR SINE MIR 29 151 -111 558 280 63 101 chr5 97135800 97136228 -105949304 + MLT1J2 LTR MaLR 4 415 -35 694 215 33 31 chr5 97136617 97136875 -105948657 + MER2 DNA MER2_type 20 320 -25 21 36 0 0 chr5 97138392 97138420 -105947112 + AT_rich Low_complexity Low_complexity 1 28 0 605 170 0 9 chr5 97139202 97139308 -105946224 + FLAM_C SINE Alu 25 129 -14 1289 112 34 15 chr5 97139786 97139991 -105945541 - MER2 DNA MER2_type -136 209 1 522 308 140 48 chr5 97140289 97141001 -105944531 + L2 LINE L2 1217 1994 -1320 575 310 5 27 chr5 97141148 97141335 -105944197 + MIR SINE MIR 1 183 -79 263 202 32 21 chr5 97141617 97141711 -105943821 + L1M LINE L1 5284 5378 -2430 5880 105 10 44 chr5 97141726 97143734 -105941798 - L1PA15 LINE L1 -6 6159 4198 21 0 0 0 chr5 97144214 97144235 -105941297 + AT_rich Low_complexity Low_complexity 1 21 0 180 338 54 27 chr5 97144499 97144573 -105940959 - L2 LINE L2 -665 2649 2574 22 0 0 0 chr5 97144834 97144856 -105940676 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 97145089 97145124 -105940408 + AT_rich Low_complexity Low_complexity 1 35 0 3943 175 132 135 chr5 97146749 97148329 -105937203 - HUERS-P1 LTR ERV1 -3387 2559 767 3029 178 67 17 chr5 97148325 97148812 -105936720 - HUERS-P1 LTR ERV1 -4466 1480 1019 * 345 47 0 0 chr5 97148812 97148855 -105936677 + (GA)n Simple_repeat Simple_repeat 2 44 0 3029 178 67 17 chr5 97148855 97149039 -105936493 - HUERS-P1 LTR ERV1 -4927 1019 14 313 200 117 67 chr5 97149070 97149190 -105936342 - HUERS-P1 LTR ERV1 -5603 660 535 1776 181 77 156 chr5 97149517 97150306 -105935226 - LTR8A LTR ERV1 0 727 1 316 160 30 170 chr5 97150506 97150606 -105934926 + L2 LINE L2 3227 3312 -1 21 36 0 0 chr5 97150671 97150699 -105934833 + AT_rich Low_complexity Low_complexity 1 28 0 217 324 35 42 chr5 97152269 97152411 -105933121 - L2 LINE L2 -571 2743 2603 28 0 0 0 chr5 97152633 97152661 -105932871 + AT_rich Low_complexity Low_complexity 1 28 0 1552 179 16 44 chr5 97153194 97153513 -105932019 + AluJo SINE Alu 1 310 -2 396 160 27 0 chr5 97154136 97154211 -105931321 + MER116 DNA Mariner 4 80 0 1547 153 36 14 chr5 97155635 97155940 -105929592 + AluSx SINE Alu 3 313 0 26 0 0 0 chr5 97156002 97156028 -105929504 + AT_rich Low_complexity Low_complexity 1 26 0 296 287 105 30 chr5 97156133 97156273 -105929259 + MIR3 SINE MIR 48 199 -9 618 272 68 28 chr5 97158552 97158792 -105926740 + MIR SINE MIR 11 261 -1 1410 199 68 10 chr5 97159080 97159372 -105926160 - AluJo SINE Alu -3 309 1 3362 197 54 20 chr5 97159691 97160038 -105925494 + L1MC1 LINE L1 4264 4598 -1735 231 36 0 0 chr5 97160038 97160066 -105925466 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 3362 197 54 20 chr5 97160066 97161546 -105923986 + L1MC1 LINE L1 4598 6315 -18 420 314 204 4 chr5 97161812 97162067 -105923465 + L2 LINE L2 3006 3311 -2 7014 53 11 10 chr5 97162839 97163752 -105921780 + L1PA8 LINE L1 5254 6167 -5 242 273 0 0 chr5 97163807 97163862 -105921670 + MER5A DNA MER1_type 132 186 -3 2096 138 0 40 chr5 97163906 97164253 -105921279 - MER1B DNA MER1_type 0 337 5 249 345 79 22 chr5 97165123 97165262 -105920270 - MIR3 SINE MIR -1 207 61 346 221 86 57 chr5 97165766 97165906 -105919626 + MIR3 SINE MIR 43 186 -22 2188 178 75 56 chr5 97166228 97166852 -105918680 + MER92B LTR ERV1 1 636 0 419 88 59 20 chr5 97168399 97168501 -105917031 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 183 42 0 0 chr5 97169138 97169162 -105916370 + (T)n Simple_repeat Simple_repeat 1 24 0 1757 188 0 0 chr5 97170673 97170961 -105914571 + AluJb SINE Alu 1 288 -24 1450 162 42 82 chr5 97170974 97171351 -105914181 + MLT1A1 LTR MaLR 4 365 0 210 37 0 0 chr5 97171490 97171517 -105914015 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1809 156 11 0 chr5 97171528 97171811 -105913721 + AluSx SINE Alu 12 297 -15 484 382 79 12 chr5 97172227 97172753 -105912779 - L2 LINE L2 -38 3234 2674 263 272 63 80 chr5 97172775 97172896 -105912636 - L1MEd LINE L1 -4136 2174 2052 702 193 0 0 chr5 97172896 97173015 -105912517 - 5S rRNA rRNA -2 119 1 263 272 63 80 chr5 97173015 97173180 -105912352 - L1MEd LINE L1 -4258 2052 1893 426 264 139 48 chr5 97173343 97174119 -105911413 - L1MEd LINE L1 -4633 1677 788 34 55 0 0 chr5 97174179 97174234 -105911298 + AT_rich Low_complexity Low_complexity 1 55 0 748 191 0 8 chr5 97174703 97174834 -105910698 + FLAM_C SINE Alu 2 131 -2 272 267 247 20 chr5 97175330 97175585 -105909947 + L1ME3A LINE L1 3850 4162 -1984 2250 120 133 0 chr5 97175665 97176041 -105909491 + MSTA LTR MaLR 1 426 -2 658 243 101 25 chr5 97176047 97176413 -105909119 + L1ME3A LINE L1 4307 4700 -1446 1480 203 72 57 chr5 97176425 97176884 -105908648 + L1MB8 LINE L1 5711 6176 -2 369 280 60 28 chr5 97176970 97177188 -105908344 + L1ME3A LINE L1 4860 5084 -1062 1689 206 61 83 chr5 97177263 97177900 -105907632 + L1MC5 LINE L1 6743 7365 -596 1113 217 308 8 chr5 97178104 97178491 -105907041 - MLT1F LTR MaLR 0 542 40 611 281 90 79 chr5 97178533 97179156 -105906376 - MLT1F1-int LTR MaLR -41 1330 701 570 217 7 14 chr5 97179416 97179554 -105905978 - FLAM_C SINE Alu -6 137 1 679 296 32 18 chr5 97179555 97179839 -105905693 - MLT1F1-int LTR MaLR -814 557 270 276 322 70 0 chr5 97179844 97179987 -105905545 - MLT1F1-int LTR MaLR -1217 154 2 1430 240 120 42 chr5 97179988 97180421 -105905111 - MLT1F1 LTR MaLR 0 567 64 2386 139 60 2 chr5 97180421 97180824 -105904708 + MSTB LTR MaLR 1 426 0 1430 240 120 42 chr5 97180824 97180894 -105904638 - MLT1F1 LTR MaLR -503 64 1 777 205 135 8 chr5 97180955 97181214 -105904318 + L1MC5 LINE L1 7608 7899 -62 2418 176 58 3 chr5 97181220 97181721 -105903811 - Tigger7 DNA MER2_type -4 2483 4 438 214 15 15 chr5 97181761 97181892 -105903640 + L1ME3A LINE L1 5175 5305 -841 563 250 145 5 chr5 97181946 97182361 -105903171 + L1ME3A LINE L1 5430 5930 -240 464 200 82 0 chr5 97182547 97182657 -105902875 - MER94 DNA DNA -14 120 2 25 75 0 0 chr5 97182735 97182788 -105902744 + AT_rich Low_complexity Low_complexity 1 53 0 24 53 0 0 chr5 97182827 97182865 -105902667 + AT_rich Low_complexity Low_complexity 1 38 0 781 259 60 0 chr5 97182915 97183131 -105902401 - MIR SINE MIR -27 235 7 1651 209 70 14 chr5 97183147 97183588 -105901944 - Charlie4a DNA MER1_type -6 502 37 1860 148 3 26 chr5 97183859 97184163 -105901369 + AluJb SINE Alu 1 297 -15 1435 169 100 7 chr5 97184795 97185229 -105900303 + LTR54 LTR ERV1 1 496 -2 240 289 62 0 chr5 97185248 97185345 -105900187 + MIR SINE MIR 112 214 -48 1202 227 159 27 chr5 97185896 97186336 -105899196 + MLT1D LTR MaLR 8 505 0 308 122 0 20 chr5 97186377 97186426 -105899106 - MLT2B3 LTR ERVL 0 520 473 1053 210 36 36 chr5 97186555 97186836 -105898696 + MER93b LTR ERV1 89 369 -4 621 12 35 0 chr5 97186837 97186923 -105898609 + (TAGA)n Simple_repeat Simple_repeat 1 89 0 2038 211 95 17 chr5 97186924 97187389 -105898143 - MLT2B3 LTR ERVL -53 501 1 889 315 110 25 chr5 97187974 97188419 -105897113 + L3 LINE CR1 241 723 -854 338 271 158 6 chr5 97188842 97189019 -105896513 + L1ME LINE L1 5526 5729 -392 646 288 94 88 chr5 97189412 97189867 -105895665 + L3 LINE CR1 1067 1524 -53 241 276 92 31 chr5 97189893 97189991 -105895541 + MIR3 SINE MIR 98 201 -7 2013 139 0 3 chr5 97190066 97190361 -105895171 + AluSx SINE Alu 1 294 -18 3088 208 63 13 chr5 97190469 97191172 -105894360 + L1MD2 LINE L1 5395 6132 -227 723 167 17 0 chr5 97191422 97191542 -105893990 - FLAM_C SINE Alu -7 126 5 3730 154 68 4 chr5 97191627 97192136 -105893396 + Tigger3b DNA MER2_type 1 567 -2461 2279 69 0 0 chr5 97192136 97192411 -105893121 - AluY SINE Alu -14 297 23 3730 154 68 4 chr5 97192411 97192590 -105892942 + Tigger3b DNA MER2_type 567 733 -498 8026 142 44 39 chr5 97192591 97193056 -105892476 + L1MA4 LINE L1 3769 4230 -2070 1668 161 4 21 chr5 97193056 97193336 -105892196 + AluJo SINE Alu 5 279 -33 8026 142 44 39 chr5 97193336 97194584 -105890948 + L1MA4 LINE L1 4230 5470 -830 723 174 167 0 chr5 97194584 97194722 -105890810 + FAM SINE Alu 5 165 -10 8026 142 44 39 chr5 97194722 97194828 -105890704 + L1MA4 LINE L1 5470 5574 -726 1937 139 56 0 chr5 97194828 97195097 -105890435 + AluSx SINE Alu 1 288 -24 351 0 0 0 chr5 97195097 97195136 -105890396 + (CA)n Simple_repeat Simple_repeat 2 40 0 1937 139 56 0 chr5 97195136 97195153 -105890379 + AluSx SINE Alu 288 303 -9 8026 142 44 39 chr5 97195153 97195852 -105889680 + L1MA4 LINE L1 5574 6290 -10 3068 124 48 14 chr5 97195859 97196374 -105889158 + Tigger3b DNA MER2_type 700 1232 0 1683 168 17 31 chr5 97196664 97196956 -105888576 + AluJb SINE Alu 11 298 -14 471 280 55 95 chr5 97197041 97197441 -105888091 + MLT1I LTR MaLR 19 402 -7 2131 123 0 0 chr5 97197727 97198058 -105887474 - AluSq SINE Alu 0 331 1 37 0 0 0 chr5 97198083 97198120 -105887412 + AT_rich Low_complexity Low_complexity 1 37 0 749 172 8 0 chr5 97198120 97198242 -105887290 - FLAM_C SINE Alu -20 123 1 1197 280 78 20 chr5 97198287 97198687 -105886845 - LTR16A LTR ERVL -13 437 15 225 178 0 0 chr5 97198745 97198790 -105886742 + (CACCAT)n Simple_repeat Simple_repeat 5 49 0 325 190 10 90 chr5 97198790 97198890 -105886642 - MIR SINE MIR -11 251 160 535 252 0 53 chr5 97199626 97199757 -105885775 + MLT1F LTR MaLR 1 124 -418 1378 163 38 13 chr5 97199765 97200004 -105885528 + MLT1F LTR MaLR 298 542 0 1941 140 7 0 chr5 97200096 97200382 -105885150 - AluSx SINE Alu -24 288 1 503 355 51 68 chr5 97200595 97200795 -105884737 + L2 LINE L2 2544 2746 -526 1739 160 36 7 chr5 97200795 97201076 -105884456 + AluJo SINE Alu 1 289 -23 503 355 51 68 chr5 97201076 97201620 -105883912 + L2 LINE L2 2746 3272 0 535 277 109 15 chr5 97201664 97201866 -105883666 + MIR SINE MIR 31 251 -11 268 152 22 0 chr5 97203984 97204030 -105881502 - L1ME LINE L1 -600 5570 5524 808 271 36 17 chr5 97204049 97204418 -105881114 - L1ME LINE L1 -715 5455 5080 32257 100 10 8 chr5 97204428 97209105 -105876427 + L1P LINE L1 11 4698 -1448 30053 49 2 0 chr5 97209100 97212818 -105872714 - L1P LINE L1 -2420 3726 3 * 268 314 13 72 chr5 97213264 97213417 -105872115 + L2 LINE L2 2558 2701 -613 971 192 0 6 chr5 97213434 97213606 -105871926 + FAM SINE Alu 1 42 -7 1655 249 44 33 chr5 97213625 97214163 -105871369 + L2 LINE L2 2733 3286 -27 291 54 0 0 chr5 97214192 97214229 -105871303 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 243 273 104 0 chr5 97214507 97214584 -105870948 - MIR3 SINE MIR -32 176 92 1612 113 61 88 chr5 97215010 97215217 -105870315 + MER4B LTR ERV1 289 485 -125 2213 113 0 3 chr5 97215217 97215517 -105870015 + AluSx SINE Alu 1 299 -13 1612 113 61 88 chr5 97215517 97215638 -105869894 + MER4B LTR ERV1 485 608 -2 4382 144 24 49 chr5 97215640 97217125 -105868407 - L1MA5A LINE L1 -211 6086 4641 732 164 0 31 chr5 97217137 97217265 -105868267 + FLAM_C SINE Alu 1 124 -19 226 175 0 32 chr5 97217265 97217328 -105868204 + GA-rich Low_complexity Low_complexity 1 61 0 322 197 127 0 chr5 97217328 97217399 -105868133 - L1MA5A LINE L1 -1508 4638 4559 983 178 6 0 chr5 97217426 97217606 -105867926 - AluJb SINE Alu 0 309 129 1870 149 36 13 chr5 97217609 97217911 -105867621 - AluJb SINE Alu -2 310 2 24 0 0 0 chr5 97220215 97220239 -105865293 + AT_rich Low_complexity Low_complexity 1 24 0 488 272 134 25 chr5 97220389 97220591 -105864941 + MIR SINE MIR 13 236 -26 1876 155 3 3 chr5 97220679 97220983 -105864549 - AluJb SINE Alu -8 304 1 24 32 0 0 chr5 97221773 97221804 -105863728 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 97222036 97222065 -105863467 + AT_rich Low_complexity Low_complexity 1 29 0 2540 44 0 0 chr5 97222070 97222366 -105863166 + AluY SINE Alu 1 296 -15 472 224 0 17 chr5 97222810 97222926 -105862606 + MSTD LTR MaLR 1 114 -282 253 150 0 0 chr5 97222912 97222952 -105862580 + MSTD LTR MaLR 357 396 0 * 213 39 0 0 chr5 97222994 97223020 -105862512 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2328 89 10 0 chr5 97223058 97223351 -105862181 + AluSc SINE Alu 1 296 -13 21 82 0 0 chr5 97223873 97223922 -105861610 + AT_rich Low_complexity Low_complexity 1 49 0 1067 162 0 17 chr5 97224042 97224221 -105861311 - FRAM SINE Alu -6 170 1 5421 164 19 45 chr5 97224612 97225114 -105860418 - L1MA9 LINE L1 0 6312 5798 224 30 30 0 chr5 97225114 97225147 -105860385 + (TG)n Simple_repeat Simple_repeat 1 34 0 5421 164 19 45 chr5 97225147 97225640 -105859892 - L1MA9 LINE L1 -514 5798 5349 1406 203 39 4 chr5 97225640 97225921 -105859611 - AluJo SINE Alu -17 295 5 5421 164 19 45 chr5 97225921 97226410 -105859122 - L1MA9 LINE L1 -963 5349 4848 249 209 0 0 chr5 97226704 97226771 -105858761 + (CA)n Simple_repeat Simple_repeat 1 67 0 310 330 0 9 chr5 97227649 97227755 -105857777 + L1MC5 LINE L1 7809 7913 -48 202 184 0 0 chr5 97227934 97227956 -105857576 + A-rich Low_complexity Low_complexity 4 28 -13 787 199 0 0 chr5 97227956 97228087 -105857445 + FLAM_C SINE Alu 1 131 -2 202 184 0 0 chr5 97228087 97228102 -105857430 + A-rich Low_complexity Low_complexity 27 41 0 592 229 50 75 chr5 97228708 97228948 -105856584 + L1MA9 LINE L1 6041 6274 -38 24 0 0 0 chr5 97228953 97228977 -105856555 + AT_rich Low_complexity Low_complexity 1 24 0 1059 265 105 12 chr5 97229186 97229518 -105856014 - MLT1J2 LTR MaLR -4 446 84 1506 204 0 4 chr5 97229634 97229904 -105855628 + AluJo SINE Alu 1 269 -43 490 285 110 40 chr5 97229943 97230171 -105855361 + MIR SINE MIR 8 251 -11 229 288 41 0 chr5 97230172 97230245 -105855287 + MIR SINE MIR 185 260 -2 4423 157 34 35 chr5 97230903 97231222 -105854310 - L1MD1 LINE L1 -5 6631 6313 1916 139 0 36 chr5 97231222 97231525 -105854007 + AluSx SINE Alu 1 292 -20 4423 157 34 35 chr5 97231525 97231860 -105853672 - L1MD1 LINE L1 -323 6313 5976 2666 14 0 0 chr5 97231860 97232151 -105853381 + AluY SINE Alu 15 305 -6 4423 157 34 35 chr5 97232151 97232435 -105853097 - L1MD1 LINE L1 -660 5976 5693 438 165 0 47 chr5 97232451 97232536 -105852996 - FLAM SINE Alu -14 129 49 11349 26 0 0 chr5 97232536 97233877 -105851655 - L1PA3 LINE L1 -968 5178 3838 7485 25 1 1 chr5 97233877 97234870 -105850662 + L1PA3 LINE L1 5184 6155 0 294 269 0 3 chr5 97234871 97234949 -105850583 - AluJ/FLAM SINE Alu -240 62 1 1454 226 83 54 chr5 97234953 97235565 -105849967 - L1MD1 LINE L1 -854 5686 5057 180 0 0 0 chr5 97235570 97235590 -105849942 + (T)n Simple_repeat Simple_repeat 1 20 0 14694 149 20 27 chr5 97235658 97238557 -105846975 + L1MA3 LINE L1 2141 5020 -2704 229 32 0 0 chr5 97238557 97238588 -105846944 - MADE1 DNA Mariner -12 68 38 14694 149 20 27 chr5 97238588 97241274 -105844258 + L1MA3 LINE L1 5020 7723 -1 22 0 0 0 chr5 97241275 97241297 -105844235 + AT_rich Low_complexity Low_complexity 1 22 0 3791 216 66 48 chr5 97241314 97241846 -105843686 - L1MD1 LINE L1 -1814 4726 4205 1947 148 10 7 chr5 97241846 97242156 -105843376 + AluSx SINE Alu 1 311 -1 3791 216 66 48 chr5 97242156 97242888 -105842644 - L1MD1 LINE L1 -2335 4205 3432 2180 125 0 3 chr5 97242888 97243193 -105842339 - AluSq SINE Alu -9 304 1 3791 216 66 48 chr5 97243193 97243312 -105842220 - L1MD1 LINE L1 -3108 3432 3317 * 4363 252 49 29 chr5 97243300 97243575 -105841957 - L1MD1 LINE L1 -5358 1182 914 1636 186 22 26 chr5 97243575 97243887 -105841645 + AluJo SINE Alu 1 311 -1 4363 252 49 29 chr5 97243887 97244768 -105840764 - L1MD1 LINE L1 -5626 914 2 2297 99 0 0 chr5 97244952 97245255 -105840277 - AluSg1 SINE Alu -5 304 2 24 0 0 0 chr5 97245366 97245390 -105840142 + AT_rich Low_complexity Low_complexity 1 24 0 1730 52 0 0 chr5 97246881 97247093 -105838439 - L1PA5 LINE L1 -4 6150 5939 8924 79 23 5 chr5 97247670 97248913 -105836619 - L1P LINE L1 -3311 2835 1570 6977 54 7 1 chr5 97248913 97250490 -105835042 + L1PA6 LINE L1 4581 6140 -14 2088 259 78 13 chr5 97250942 97251688 -105833844 + HAL1 LINE L1 1338 2131 -376 1069 209 247 16 chr5 97251679 97252449 -105833083 - L1M4 LINE L1 -3796 2848 1864 * 2432 69 3 0 chr5 97252500 97252804 -105832728 + AluY SINE Alu 7 311 0 4905 239 41 23 chr5 97252825 97253119 -105832413 - L1M4 LINE L1 -4833 1709 1422 2189 129 3 0 chr5 97253119 97253422 -105832110 - AluSx SINE Alu -8 304 1 4905 239 41 23 chr5 97253422 97254493 -105831039 - L1M4 LINE L1 -5120 1422 320 * 5853 183 11 11 chr5 97254490 97254973 -105830559 - L1MC1 LINE L1 0 6333 5851 1900 156 0 32 chr5 97254973 97255287 -105830245 - AluSx SINE Alu -8 304 1 5853 183 11 11 chr5 97255287 97256100 -105829432 - L1MC1 LINE L1 -482 5851 5036 490 212 38 130 chr5 97256103 97256287 -105829245 - MER21B LTR ERV1 -672 191 25 2029 148 54 39 chr5 97256318 97256749 -105828783 - MLT2B1 LTR ERVL -121 433 1 233 298 32 11 chr5 97257686 97257780 -105827752 + HAL1 LINE L1 1691 1786 -721 210 37 0 0 chr5 97257817 97257844 -105827688 + (GA)n Simple_repeat Simple_repeat 1 27 0 954 241 80 41 chr5 97257845 97258335 -105827197 + HAL1 LINE L1 1887 2395 -112 2832 180 14 59 chr5 97258438 97258647 -105826885 - L1MC3 LINE L1 0 7785 7568 1901 160 10 0 chr5 97258647 97258935 -105826597 - AluSx SINE Alu -21 291 1 2832 180 14 59 chr5 97258935 97259365 -105826167 - L1MC3 LINE L1 -217 7568 7175 24 0 0 0 chr5 97260465 97260489 -105825043 + AT_rich Low_complexity Low_complexity 1 24 0 2141 189 46 100 chr5 97260758 97261251 -105824281 - MER92B LTR ERV1 0 636 187 4694 36 0 0 chr5 97261251 97261807 -105823725 - L1PA5 LINE L1 -6 6148 5593 2141 189 46 100 chr5 97261807 97261985 -105823547 - MER92B LTR ERV1 -449 187 1 216 260 96 0 chr5 97262110 97262183 -105823349 - L2 LINE L2 -667 2647 2568 287 344 0 11 chr5 97262970 97263060 -105822472 - L2 LINE L2 -1 3271 3183 558 232 110 0 chr5 97263193 97263348 -105822184 + MER58C DNA MER1_type 44 215 0 207 0 0 0 chr5 97263447 97263470 -105822062 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 336 266 156 0 chr5 97263724 97263833 -105821699 - MIR SINE MIR -56 206 81 3397 136 25 14 chr5 97264760 97265310 -105820222 + MER41D LTR ERV1 2 557 0 204 125 0 0 chr5 97265396 97265428 -105820104 + (A)n Simple_repeat Simple_repeat 1 32 0 571 201 73 18 chr5 97265428 97265592 -105819940 - L1MC2 LINE L1 -13 6331 6159 24 0 0 0 chr5 97265837 97265861 -105819671 + AT_rich Low_complexity Low_complexity 1 24 0 323 262 12 0 chr5 97266082 97266166 -105819366 + MLT1L LTR MaLR 531 615 0 228 67 0 0 chr5 97267593 97267623 -105817909 + (CA)n Simple_repeat Simple_repeat 1 30 0 414 216 183 26 chr5 97270665 97270818 -105814714 + MER5B DNA MER1_type 1 177 -1 327 128 35 0 chr5 97271240 97271326 -105814206 + (TA)n Simple_repeat Simple_repeat 2 90 0 7770 164 32 30 chr5 97271338 97272404 -105813128 + L1MC3 LINE L1 5351 6424 -1361 2034 203 13 13 chr5 97272404 97272799 -105812733 + MSTD LTR MaLR 2 396 0 7770 164 32 30 chr5 97272799 97273290 -105812242 + L1MC3 LINE L1 6424 6912 -873 676 162 0 0 chr5 97273292 97273403 -105812129 - MSTA LTR MaLR -84 344 234 577 265 110 0 chr5 97273414 97273614 -105811918 + MARNA DNA Mariner 309 530 -56 1874 256 86 90 chr5 97273752 97275002 -105810530 - HAL1 LINE L1 0 2507 1263 436 208 217 0 chr5 97275006 97275112 -105810420 + MLT1E LTR MaLR 3 131 -462 3091 65 12 0 chr5 97275120 97275536 -105809996 + L1P LINE L1 4912 5332 -814 663 153 22 29 chr5 97275536 97275673 -105809859 + SVA Other Other 488 623 -763 272 271 0 0 chr5 97275673 97275732 -105809800 - HAL1 LINE L1 -2448 59 1 410 264 114 41 chr5 97276544 97276790 -105808742 + L2 LINE L2 3002 3265 -48 275 336 93 0 chr5 97276770 97276910 -105808622 + L2 LINE L2 2918 3070 -243 * 406 321 31 6 chr5 97276930 97277089 -105808443 - LTR67 LTR ERVL -8 549 387 210 262 0 0 chr5 97277184 97277268 -105808264 + GA-rich Low_complexity Low_complexity 2 85 0 337 281 31 31 chr5 97277291 97277387 -105808145 - LTR67 LTR ERVL -339 218 123 217 266 117 47 chr5 97277484 97277612 -105807920 + L2 LINE L2 3086 3222 -91 915 202 41 53 chr5 97277612 97277821 -105807711 - MLT1E2 LTR MaLR -2 503 293 2187 123 0 16 chr5 97277821 97278138 -105807394 - AluSx SINE Alu 0 312 1 915 202 41 53 chr5 97278138 97278287 -105807245 - MLT1E2 LTR MaLR -212 293 144 1863 162 0 0 chr5 97278287 97278634 -105806898 - AluSx SINE Alu 0 347 1 581 200 104 9 chr5 97278637 97278752 -105806780 - FLAM_A SINE Alu -7 126 1 915 202 41 53 chr5 97278752 97278841 -105806691 - MLT1E2 LTR MaLR -363 142 2 250 256 146 0 chr5 97278845 97278927 -105806605 + L2 LINE L2 3219 3312 -1 2651 65 12 0 chr5 97279056 97279396 -105806136 + LTR14A LTR ERVK 1 344 0 1835 155 7 13 chr5 97279835 97280145 -105805387 + AluJb SINE Alu 1 308 -4 185 400 82 0 chr5 97282524 97282609 -105802923 + L2 LINE L2 3171 3262 -10 2234 112 3 0 chr5 97283003 97283306 -105802226 - AluSq SINE Alu -9 304 1 207 290 112 19 chr5 97283327 97283434 -105802098 + MIR SINE MIR 14 130 -132 28 0 0 0 chr5 97284189 97284217 -105801315 + AT_rich Low_complexity Low_complexity 1 28 0 239 242 33 66 chr5 97284232 97284323 -105801209 + MIR SINE MIR 79 166 -96 219 295 43 120 chr5 97286257 97286582 -105798950 - L2 LINE L2 -26 3246 2947 2353 89 0 3 chr5 97286694 97286998 -105798534 - AluSc SINE Alu -5 304 2 227 214 18 18 chr5 97288262 97288318 -105797214 + CT-rich Low_complexity Low_complexity 1 56 0 216 0 0 0 chr5 97288318 97288342 -105797190 + (T)n Simple_repeat Simple_repeat 1 24 0 787 246 102 8 chr5 97289250 97289486 -105796046 - MIR SINE MIR 0 262 5 314 261 22 65 chr5 97289586 97289724 -105795808 + L2 LINE L2 3173 3304 -9 25 0 0 0 chr5 97291453 97291478 -105794054 + AT_rich Low_complexity Low_complexity 1 25 0 32 43 0 0 chr5 97292238 97292284 -105793248 + AT_rich Low_complexity Low_complexity 1 46 0 36 0 0 0 chr5 97292343 97292379 -105793153 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 97293871 97293899 -105791633 + AT_rich Low_complexity Low_complexity 1 28 0 353 22 22 0 chr5 97296290 97296336 -105789196 + (CA)n Simple_repeat Simple_repeat 1 47 0 349 346 151 57 chr5 97297428 97297933 -105787599 + L1M2 LINE L1 850 1401 -5448 23 0 0 0 chr5 97298239 97298262 -105787270 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 97299071 97299107 -105786425 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 97299474 97299496 -105786036 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 97302654 97302675 -105782857 + AT_rich Low_complexity Low_complexity 1 21 0 1242 240 57 22 chr5 97306985 97307389 -105778143 + L1ME1 LINE L1 5744 6161 -5 1495 213 18 0 chr5 97307397 97307679 -105777853 + AluJo SINE Alu 1 287 -25 865 9 0 19 chr5 97307824 97307932 -105777600 + L1PA4 LINE L1 6050 6155 0 189 0 0 0 chr5 97310212 97310233 -105775299 + (T)n Simple_repeat Simple_repeat 1 21 0 1674 170 10 29 chr5 97310495 97310635 -105774897 + AluJo SINE Alu 1 142 -170 2318 100 3 0 chr5 97310635 97310936 -105774596 + AluSp SINE Alu 1 302 -11 1674 170 10 29 chr5 97310936 97311106 -105774426 + AluJo SINE Alu 142 305 -7 2123 109 23 0 chr5 97311326 97311629 -105773903 + AluSp SINE Alu 1 310 -3 32 0 0 0 chr5 97311903 97311935 -105773597 + AT_rich Low_complexity Low_complexity 1 32 0 607 333 55 32 chr5 97312923 97313326 -105772206 - L2 LINE L2 -673 2641 2230 307 366 37 11 chr5 97313326 97313517 -105772015 - L2 LINE L2 -1307 2007 1812 858 165 176 16 chr5 97314477 97314665 -105770867 + MER20 DNA MER1_type 2 219 0 29 28 0 0 chr5 97314861 97314897 -105770635 + AT_rich Low_complexity Low_complexity 1 36 0 1548 150 17 42 chr5 97314897 97315184 -105770348 - AluJo SINE Alu -30 282 3 2126 101 0 3 chr5 97315301 97315598 -105769934 + AluSx SINE Alu 1 296 -16 420 310 62 49 chr5 97315964 97316190 -105769342 - MIR SINE MIR -19 243 15 336 209 87 9 chr5 97316325 97316440 -105769092 - L1ME4a LINE L1 -1 6120 5997 639 254 141 18 chr5 97316765 97316985 -105768547 - MIR SINE MIR -14 248 2 212 265 0 0 chr5 97317243 97317292 -105768240 + L2 LINE L2 3264 3312 -1 2392 93 3 3 chr5 97317457 97317770 -105767762 - AluSp SINE Alu 0 313 1 417 149 14 27 chr5 97418128 97418202 -105667330 - AluS SINE Alu -228 85 13 1618 70 0 24 chr5 97418309 97418522 -105667010 + AluY SINE Alu 82 289 -22 365 279 99 19 chr5 97419046 97419207 -105666325 - L2 LINE L2 -67 3246 3073 280 220 0 0 chr5 97419503 97419562 -105665970 + MLT1A2 LTR MaLR 308 366 -8 274 184 171 0 chr5 97421595 97421671 -105663861 + L2 LINE L2 3217 3305 -8 189 107 0 0 chr5 97422393 97422421 -105663111 + (TGAG)n Simple_repeat Simple_repeat 4 31 0 5474 128 19 40 chr5 97423654 97423854 -105661678 + Tigger1 DNA MER2_type 1 204 -2214 2243 101 0 13 chr5 97423854 97424162 -105661370 + AluSx SINE Alu 1 304 -8 5474 128 19 40 chr5 97424162 97424333 -105661199 + Tigger1 DNA MER2_type 204 377 -2041 306 0 0 0 chr5 97424333 97424367 -105661165 + (TC)n Simple_repeat Simple_repeat 1 34 0 5474 128 19 40 chr5 97424367 97424862 -105660670 + Tigger1 DNA MER2_type 377 849 -1569 1982 103 10 33 chr5 97424862 97425164 -105660368 + AluSg SINE Alu 1 295 -15 5474 128 19 40 chr5 97425164 97425249 -105660283 + Tigger1 DNA MER2_type 849 934 -1484 668 158 9 0 chr5 97425356 97425470 -105660062 + AluSg/x SINE Alu 191 305 -7 827 268 160 14 chr5 97425627 97426052 -105659480 + L2 LINE L2 2827 3313 0 2127 106 14 0 chr5 97426602 97426894 -105658638 + AluSx SINE Alu 3 298 -14 301 269 39 0 chr5 97426911 97427024 -105658508 - MLT1J LTR MaLR -306 179 22 552 262 133 29 chr5 97427213 97427423 -105658109 + MIR SINE MIR 19 250 -12 2138 125 23 0 chr5 97427564 97427869 -105657663 - AluSx SINE Alu 0 312 1 290 316 42 58 chr5 97427957 97428147 -105657385 - MIR3 SINE MIR -19 189 3 327 85 0 0 chr5 97428282 97428329 -105657203 + (TCC)n Simple_repeat Simple_repeat 3 49 0 552 324 96 22 chr5 97428943 97429002 -105656530 - L2 LINE L2 -566 2748 2695 2141 111 3 0 chr5 97429002 97429299 -105656233 + AluSx SINE Alu 1 298 -14 552 324 96 22 chr5 97429299 97429594 -105655938 - L2 LINE L2 -619 2695 2368 279 270 90 0 chr5 97430031 97430120 -105655412 - MER91A DNA MER1_type 0 196 100 195 42 0 0 chr5 97430309 97430333 -105655199 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2007 128 0 0 chr5 97430335 97430616 -105654916 - AluSx SINE Alu -31 281 1 340 295 189 39 chr5 97430812 97431199 -105654333 - L2 LINE L2 -1253 2061 1617 433 293 179 0 chr5 97431375 97431515 -105654017 - MER5A DNA MER1_type 0 189 25 715 268 111 41 chr5 97431521 97431909 -105653623 + HAL1 LINE L1 1219 1633 -874 1086 209 8 51 chr5 97433044 97433278 -105652254 - MER58A DNA MER1_type 0 224 1 279 257 204 9 chr5 97433397 97433510 -105652022 - MIR SINE MIR -2 260 126 2071 106 7 13 chr5 97433759 97434062 -105651470 + AluSx SINE Alu 1 301 -11 634 239 109 30 chr5 97434076 97434277 -105651255 + MIR SINE MIR 42 258 -4 209 275 102 72 chr5 97434584 97434751 -105650781 - MIR SINE MIR -72 190 19 1365 225 10 6 chr5 97435735 97436046 -105649486 - AluJo SINE Alu 0 312 1 1970 181 34 28 chr5 97436352 97436901 -105648631 - MLT2A2 LTR ERVL 0 554 1 1045 201 42 17 chr5 97439568 97439807 -105645725 - ORSL DNA AcHobo 0 275 31 189 0 0 0 chr5 97440430 97440451 -105645081 + (CCG)n Simple_repeat Simple_repeat 2 22 0 203 184 0 20 chr5 97441780 97441829 -105643703 + G-rich Low_complexity Low_complexity 3 50 0 501 308 7 0 chr5 97443056 97443202 -105642330 - MIR3 SINE MIR -10 198 52 639 299 35 31 chr5 97444310 97444565 -105640967 + MIR SINE MIR 4 262 0 341 267 121 18 chr5 97444699 97444864 -105640668 + MER5A DNA MER1_type 8 189 0 250 300 33 0 chr5 97445886 97445946 -105639586 - L3 LINE CR1 -95 1482 1421 198 67 67 0 chr5 97446619 97446649 -105638883 + MIR SINE MIR 114 145 -63 1628 110 0 0 chr5 97446675 97446902 -105638630 + AluSq SINE Alu 1 227 -86 708 181 27 4 chr5 97447371 97447641 -105637891 + CT-rich Low_complexity Low_complexity 1 276 0 222 211 0 0 chr5 97447673 97447711 -105637821 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 964 237 128 33 chr5 97447782 97448308 -105637224 + MLT1H1 LTR MaLR 1 552 -3 265 303 192 38 chr5 97448311 97448677 -105636855 - L2 LINE L2 -98 3174 2771 188 222 0 0 chr5 97448886 97448922 -105636610 + MIR SINE MIR 83 118 -90 560 279 38 37 chr5 97449394 97449635 -105635897 + MIR SINE MIR 26 262 0 297 219 16 0 chr5 97450676 97450740 -105634792 - L2 LINE L2 -1 3312 3248 712 291 105 16 chr5 97450752 97451010 -105634522 - MLT1L LTR MaLR -6 609 329 613 265 35 48 chr5 97451289 97451365 -105634167 + LTR33 LTR ERVL 2 77 -444 2133 110 23 7 chr5 97451365 97451665 -105633867 - AluSx SINE Alu -7 305 1 613 265 35 48 chr5 97451665 97451818 -105633714 + LTR33 LTR ERVL 77 228 -293 401 318 58 6 chr5 97452567 97452740 -105632792 - MIR SINE MIR -76 186 5 464 0 18 0 chr5 97454339 97454395 -105631137 + (CAAAG)n Simple_repeat Simple_repeat 1 57 0 182 258 50 121 chr5 97454568 97454750 -105630782 + L2 LINE L2 2924 3092 -180 382 298 30 24 chr5 97454838 97455006 -105630526 - MIR SINE MIR -15 247 79 320 225 14 0 chr5 97455021 97455092 -105630440 + MER63 DNA MER1_type 675 746 -316 311 261 23 11 chr5 97455079 97455167 -105630365 + MER63 DNA MER1_type 957 1045 -15 * 247 283 50 10 chr5 97455213 97455312 -105630220 + L2 LINE L2 3211 3313 0 216 154 0 0 chr5 97455733 97455785 -105629747 + (TG)n Simple_repeat Simple_repeat 2 53 0 706 197 0 36 chr5 97456474 97456611 -105628921 + MER45A DNA AcHobo 46 177 -1 226 259 17 0 chr5 97456612 97456670 -105628862 - MER5A DNA MER1_type -35 154 96 513 210 0 0 chr5 97456990 97457090 -105628442 + FRAM SINE Alu 4 103 -73 230 336 0 25 chr5 97457647 97457769 -105627763 + L1P LINE L1 4901 5019 -1127 311 368 42 45 chr5 97457771 97458151 -105627381 + L1ME LINE L1 5016 5394 -752 353 319 64 28 chr5 97458206 97458347 -105627185 - L1MC/D LINE L1 -1994 5814 5669 313 276 54 69 chr5 97458503 97458561 -105626971 - MIR SINE MIR 0 262 205 2061 112 42 7 chr5 97458561 97458846 -105626686 - AluSx SINE Alu -17 295 1 313 276 54 69 chr5 97458846 97458990 -105626542 - MIR SINE MIR -57 205 63 1418 150 122 12 chr5 97459907 97460204 -105625328 - AluSx SINE Alu 0 325 1 480 271 38 33 chr5 97460239 97460449 -105625083 + L1ME LINE L1 5566 5776 -345 9028 125 14 25 chr5 97460755 97461908 -105623624 + Tigger1 DNA MER2_type 947 2082 -336 2629 65 3 0 chr5 97461908 97462216 -105623316 + AluSp SINE Alu 1 309 -4 9028 125 14 25 chr5 97462216 97462547 -105622985 + Tigger1 DNA MER2_type 2082 2415 -3 257 380 69 9 chr5 97462597 97462813 -105622719 - MIR SINE MIR -2 260 32 654 262 49 27 chr5 97463197 97463380 -105622152 - MIR SINE MIR -33 229 43 1637 200 12 52 chr5 97463443 97463843 -105621689 - MLT1B LTR MaLR -6 384 1 193 261 9 9 chr5 97465031 97465142 -105620390 + (TG)n Simple_repeat Simple_repeat 2 112 0 328 230 5 43 chr5 97465157 97465344 -105620188 + (TG)n Simple_repeat Simple_repeat 1 180 0 182 255 11 0 chr5 97465370 97465464 -105620068 + (TG)n Simple_repeat Simple_repeat 2 96 0 336 335 0 0 chr5 97465495 97465727 -105619805 + (TG)n Simple_repeat Simple_repeat 1 232 0 351 303 0 43 chr5 97465826 97466011 -105619521 + (TATG)n Simple_repeat Simple_repeat 4 180 0 * 438 328 0 16 chr5 97465994 97466234 -105619298 + (TG)n Simple_repeat Simple_repeat 1 236 0 958 205 19 0 chr5 97466381 97466586 -105618946 - LTR16A1 LTR ERVL -2 455 247 326 303 11 39 chr5 97466895 97467073 -105618459 + (TATG)n Simple_repeat Simple_repeat 4 176 0 2097 167 11 11 chr5 97467589 97467943 -105617589 - MLT1A1 LTR MaLR -2 363 10 277 241 0 0 chr5 97468313 97468371 -105617161 - MIR SINE MIR -3 259 202 217 254 32 0 chr5 97468939 97469002 -105616530 + GA-rich Low_complexity Low_complexity 6 70 0 352 235 45 133 chr5 97469423 97469687 -105615845 - L1ME4a LINE L1 -23 6098 5858 273 301 98 25 chr5 97470340 97470503 -105615029 - MIR SINE MIR -24 238 64 294 350 24 8 chr5 97471712 97471835 -105613697 + L1ME LINE L1 5558 5682 -439 1932 183 35 87 chr5 97472023 97472505 -105613027 - LTR32 LTR ERVL 0 471 15 294 235 15 0 chr5 97472504 97472572 -105612960 - MER3 DNA MER1_type -136 73 5 * 328 345 0 14 chr5 97472585 97472727 -105612805 + L2 LINE L2 2656 2795 -519 188 269 0 0 chr5 97472798 97472850 -105612682 + L2 LINE L2 2926 2977 -336 491 344 42 0 chr5 97473301 97473490 -105612042 + L2 LINE L2 3075 3271 -1 216 291 80 116 chr5 97474307 97474558 -105610974 - L2 LINE L2 -31 3241 3000 2168 154 70 7 chr5 97474573 97474976 -105610556 - MSTA LTR MaLR 0 428 1 7987 166 7 12 chr5 97474976 97476373 -105609159 - MSTA-int LTR MaLR 0 1580 181 712 238 21 143 chr5 97476459 97476880 -105608652 + L2 LINE L2 2943 3312 -1 205 259 35 35 chr5 97477523 97477608 -105607924 - MIR SINE MIR -111 151 67 324 316 44 20 chr5 97477644 97477894 -105607638 + L2 LINE L2 1720 1975 -1339 344 250 10 19 chr5 97477919 97478023 -105607509 + L2 LINE L2 2971 3073 -199 310 337 23 0 chr5 97478023 97478109 -105607423 + L2 LINE L2 3225 3312 -1 226 414 0 0 chr5 97478171 97478270 -105607262 + L2 LINE L2 3139 3237 -35 230 267 17 0 chr5 97478295 97478355 -105607177 - MIR SINE MIR -190 72 12 693 187 161 0 chr5 97478408 97478563 -105606969 - MER5A DNA MER1_type -6 183 4 228 164 0 49 chr5 97479010 97479071 -105606461 + (CAGAGA)n Simple_repeat Simple_repeat 4 61 0 622 281 12 6 chr5 97479480 97479647 -105605885 - MIR SINE MIR -26 236 69 798 231 205 32 chr5 97479682 97479725 -105605807 + MLT1H LTR MaLR 109 143 -406 604 36 12 12 chr5 97479725 97479809 -105605723 + (CAATA)n Simple_repeat Simple_repeat 1 84 0 798 231 205 32 chr5 97479809 97480141 -105605391 + MLT1H LTR MaLR 143 549 0 257 282 18 18 chr5 97480341 97480451 -105605081 + L2 LINE L2 2565 2674 -640 353 280 65 27 chr5 97480477 97480702 -105604830 + L2 LINE L2 2782 3011 -261 946 180 6 142 chr5 97480733 97481044 -105604488 - L1ME2 LINE L1 -11 6153 5885 1451 232 75 23 chr5 97481407 97481886 -105603646 + MLT1D LTR MaLR 1 504 -1 2368 138 39 2 chr5 97482158 97482571 -105602961 - MSTA LTR MaLR 0 428 1 342 0 0 0 chr5 97482856 97482894 -105602638 + (CA)n Simple_repeat Simple_repeat 1 38 0 1829 144 11 14 chr5 97482921 97483232 -105602300 - AluSx SINE Alu 0 310 1 186 43 0 0 chr5 97483666 97483689 -105601843 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 190 289 184 0 chr5 97483692 97483768 -105601764 - L2 LINE L2 -15 3257 3168 572 236 107 14 chr5 97484368 97484584 -105600948 + MER106A DNA MER1_type 1 236 0 1305 197 84 38 chr5 97484857 97485228 -105600304 + MLT1C LTR MaLR 73 460 -7 2482 88 0 0 chr5 97486126 97486434 -105599098 + AluY SINE Alu 2 309 -2 216 97 0 0 chr5 97486849 97486880 -105598652 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 1709 259 53 33 chr5 97487526 97488105 -105597427 - MLT1E LTR MaLR -2 591 1 207 217 100 17 chr5 97488276 97488336 -105597196 - L2 LINE L2 -181 3091 3027 829 281 101 6 chr5 97488616 97488961 -105596571 - MLT1J2 LTR MaLR 0 450 73 772 255 0 32 chr5 97489706 97489922 -105595610 + MER3 DNA MER1_type 1 209 0 1121 162 16 16 chr5 97490096 97490287 -105595245 + AluSg/x SINE Alu 121 311 -1 1971 141 0 3 chr5 97490297 97490587 -105594945 + AluJb SINE Alu 1 289 -23 352 267 9 9 chr5 97490603 97490708 -105594824 - MER5A DNA MER1_type -81 108 4 579 300 22 6 chr5 97491203 97491383 -105594149 - MIR SINE MIR -38 224 42 201 74 0 0 chr5 97491757 97491784 -105593748 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 267 268 85 0 chr5 97493626 97493708 -105591824 + MIR SINE MIR 57 145 -117 196 146 0 104 chr5 97494261 97494309 -105591223 - L3 LINE CR1 -3 1574 1532 298 267 13 0 chr5 97495243 97495318 -105590214 - MER94 DNA DNA -3 131 56 292 240 82 55 chr5 97495740 97495886 -105589646 + MER117 DNA MER1_type 7 156 -41 834 108 0 0 chr5 97496389 97496518 -105589014 + L1PA6 LINE L1 6026 6154 0 2274 95 3 25 chr5 97497081 97497398 -105588134 + AluSg SINE Alu 1 310 0 2417 97 0 3 chr5 97497398 97497696 -105587836 + AluSg SINE Alu 1 297 -13 965 250 105 43 chr5 97498234 97498626 -105586906 - LTR16C LTR ERVL -1 490 75 1705 138 0 52 chr5 97499785 97500053 -105585479 - AluSx SINE Alu -58 254 1 1765 240 36 14 chr5 97500053 97500573 -105584959 - L1ME LINE L1 -361 5803 5272 422 152 45 20 chr5 97500629 97500875 -105584657 + (CA)n Simple_repeat Simple_repeat 1 252 0 338 284 37 9 chr5 97501174 97501283 -105584249 + L2 LINE L2 3161 3272 0 * 489 308 174 38 chr5 97501265 97501713 -105583819 - L2 LINE L2 -1 3312 2804 403 264 99 38 chr5 97501716 97501928 -105583604 + MER112 DNA MER1_type 4 228 -32 392 158 79 13 chr5 97501943 97502019 -105583513 - L2 LINE L2 -528 2786 2706 737 250 103 36 chr5 97502019 97502435 -105583097 - L1MC5 LINE L1 -10 7951 7508 1570 237 53 18 chr5 97502485 97502525 -105583007 - L1ME2 LINE L1 -9 6950 6913 1532 154 116 0 chr5 97502525 97502792 -105582740 + AluJo SINE Alu 1 298 -14 1570 237 53 18 chr5 97502792 97503245 -105582287 - L1ME2 LINE L1 -46 6913 6440 * 3521 288 86 42 chr5 97503243 97503789 -105581743 - L1ME2 LINE L1 -1436 5505 4984 2098 125 0 0 chr5 97503789 97504090 -105581442 - AluSc SINE Alu 0 301 1 3521 288 86 42 chr5 97504090 97504438 -105581094 - L1ME2 LINE L1 -1957 4984 4653 2184 113 0 0 chr5 97504438 97504773 -105580759 + AluSx SINE Alu 1 335 0 3521 288 86 42 chr5 97504773 97505592 -105579940 - L1ME2 LINE L1 -2288 4653 3714 4557 169 24 31 chr5 97505592 97505746 -105579786 + L1MA4 LINE L1 5141 5295 -1005 198 0 0 0 chr5 97505746 97505768 -105579764 + (GAAAA)n Simple_repeat Simple_repeat 1 22 0 4557 169 24 31 chr5 97505768 97506778 -105578754 + L1MA4 LINE L1 5295 6293 -7 630 247 59 16 chr5 97506809 97507064 -105578468 - L1ME2 LINE L1 -3215 3726 3461 630 157 0 64 chr5 97507169 97507246 -105578286 + L1PB3 LINE L1 6023 6089 -65 2268 101 0 0 chr5 97507246 97507534 -105577998 - AluSg SINE Alu -22 288 1 630 157 0 64 chr5 97507534 97507596 -105577936 + L1PB3 LINE L1 6089 6153 -1 2242 283 63 59 chr5 97507610 97508648 -105576884 - L1ME2 LINE L1 -4047 3075 1814 2012 169 0 6 chr5 97508648 97508961 -105576571 - AluSx SINE Alu -1 311 1 2242 283 63 59 chr5 97508961 97509513 -105576019 - L1ME2 LINE L1 -5308 1814 1266 311 89 18 0 chr5 97509557 97509613 -105575919 + (TATAA)n Simple_repeat Simple_repeat 1 57 0 263 99 64 47 chr5 97509662 97509834 -105575698 + (TA)n Simple_repeat Simple_repeat 1 175 0 2000 103 0 11 chr5 97510323 97510595 -105574937 + AluSc SINE Alu 35 303 -6 248 262 49 82 chr5 97510706 97510828 -105574704 - L1ME2 LINE L1 -6278 145 28 263 286 14 0 chr5 97511146 97511216 -105574316 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 201 193 0 140 chr5 97511309 97511366 -105574166 + L2 LINE L2 3265 3313 0 343 244 35 0 chr5 97511909 97511995 -105573537 + MIR SINE MIR 103 191 -71 2054 143 157 5 chr5 97512531 97512901 -105572631 - MSTA LTR MaLR -2 426 1 207 228 35 18 chr5 97513352 97513409 -105572123 + GA-rich Low_complexity Low_complexity 1 58 0 291 335 132 25 chr5 97514526 97514723 -105570809 + MIR SINE MIR 21 238 -24 388 379 23 5 chr5 97514723 97514942 -105570590 + L1M4 LINE L1 3232 3454 -2692 489 212 18 0 chr5 97514951 97515064 -105570468 - LTR33A LTR ERVL -3 520 406 686 277 70 30 chr5 97515130 97515401 -105570131 - LTR33A LTR ERVL -239 284 3 330 340 38 22 chr5 97515441 97515626 -105569906 + L1M4 LINE L1 3545 3732 -2414 929 193 0 0 chr5 97515627 97515777 -105569755 + FRAM SINE Alu 1 150 -26 412 313 10 5 chr5 97515791 97515989 -105569543 + L1M4 LINE L1 3758 3956 -2190 1143 213 72 61 chr5 97516139 97516500 -105569032 + MLT1A1 LTR MaLR 1 365 0 675 324 77 15 chr5 97516660 97517439 -105568093 + L1M4 LINE L1 4027 4853 -1293 * 945 182 0 70 chr5 97517422 97517664 -105567868 - L1MA7 LINE L1 -186 6105 5881 1759 104 0 0 chr5 97517722 97517942 -105567590 - AluSc SINE Alu -89 220 1 1874 129 28 40 chr5 97517961 97518287 -105567245 - MER47A DNA MER2_type 0 366 45 334 254 87 24 chr5 97518520 97518646 -105566886 - HERV16 LTR ERVL -4848 148 15 789 187 55 39 chr5 97518673 97518818 -105566714 + MER5A DNA MER1_type 2 152 -37 1683 188 3 16 chr5 97518818 97519121 -105566411 - AluJo SINE Alu -11 301 3 789 187 55 39 chr5 97519121 97519157 -105566375 + MER5A DNA MER1_type 152 186 -3 1109 254 40 56 chr5 97519160 97519604 -105565928 - LTR16A1 LTR ERVL -16 441 5 254 247 227 27 chr5 97519692 97519842 -105565690 + MIR SINE MIR 37 216 -46 408 279 43 22 chr5 97519936 97520119 -105565413 - L1MC/D LINE L1 -482 5639 5445 323 342 32 30 chr5 97520151 97520415 -105565117 + L1ME3A LINE L1 5695 5962 -208 2297 113 3 0 chr5 97520606 97520907 -105564625 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr5 97520966 97520996 -105564536 + AT_rich Low_complexity Low_complexity 1 30 0 233 319 166 40 chr5 97521070 97521486 -105564046 - L2 LINE L2 -50 3222 2752 827 174 76 17 chr5 97521736 97521908 -105563624 - MER5A DNA MER1_type -1 188 7 250 304 249 46 chr5 97522293 97522510 -105563022 - L2 LINE L2 -18 3254 2994 473 313 86 16 chr5 97523601 97523844 -105561688 - MIR SINE MIR -1 261 2 347 235 24 12 chr5 97523919 97524004 -105561528 + MIR SINE MIR 60 145 -117 2411 42 0 14 chr5 97524009 97524324 -105561208 - AluY SINE Alu 0 311 1 493 186 179 26 chr5 97524714 97524870 -105560662 - MER104 DNA MER2_type 0 180 1 362 220 0 20 chr5 97524870 97524970 -105560562 - MIR SINE MIR -2 260 163 765 203 28 50 chr5 97526099 97526147 -105559385 - MER45A DNA AcHobo -1403 178 130 2341 122 0 0 chr5 97526147 97526458 -105559074 + AluSx SINE Alu 2 312 0 765 203 28 50 chr5 97526458 97526591 -105558941 - MER45A DNA AcHobo -1451 130 1 205 273 0 15 chr5 97526598 97526664 -105558868 + MIR SINE MIR 84 148 -60 420 295 8 16 chr5 97526960 97527082 -105558450 + MIR SINE MIR 25 145 -117 415 272 197 7 chr5 97527361 97527508 -105558024 + MER5A DNA MER1_type 14 188 -1 1704 140 58 38 chr5 97527587 97527879 -105557653 - AluSx SINE Alu -14 298 1 601 228 47 13 chr5 97528753 97528902 -105556630 + MIR SINE MIR 81 234 -28 204 320 34 82 chr5 97528986 97529133 -105556399 - L2 LINE L2 -213 3059 2920 2112 226 81 56 chr5 97530094 97531027 -105554505 - L1ME LINE L1 -4817 1263 297 4477 177 68 3 chr5 97531066 97531875 -105553657 - L1MB5 LINE L1 -7 6167 5412 1930 173 0 13 chr5 97531875 97532181 -105553351 - AluJb SINE Alu -10 302 1 4477 177 68 3 chr5 97532181 97532198 -105553334 - L1MB5 LINE L1 -762 5412 5398 207 0 0 0 chr5 97532198 97532221 -105553311 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4477 177 68 3 chr5 97532221 97532736 -105552796 - L1MB5 LINE L1 -776 5398 4749 584 280 16 45 chr5 97532743 97532905 -105552627 - L1ME LINE L1 -5809 261 107 2341 125 0 0 chr5 97532905 97533209 -105552323 - AluSx SINE Alu -8 304 1 584 280 16 45 chr5 97533209 97533289 -105552243 - L1ME LINE L1 -5963 107 26 248 386 57 0 chr5 97534637 97534725 -105550807 - L3b LINE CR1 -26 1557 1465 353 143 0 197 chr5 97534750 97534973 -105550559 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 250 208 0 0 chr5 97535066 97535114 -105550418 - L2 LINE L2 -1 3271 3224 332 279 7 0 chr5 97536025 97536320 -105549212 + (TG)n Simple_repeat Simple_repeat 1 297 0 413 333 18 18 chr5 97536743 97536911 -105548621 + MIR3 SINE MIR 34 201 -7 188 244 0 22 chr5 97537020 97537065 -105548467 - MIR SINE MIR -8 254 211 862 199 23 0 chr5 97537097 97537268 -105548264 - L1PA16 LINE L1 -1 6165 5991 342 175 0 0 chr5 97537733 97537813 -105547719 + C-rich Low_complexity Low_complexity 1 80 0 275 91 0 0 chr5 97538119 97538163 -105547369 - L1PA16 LINE L1 -182 5984 5941 253 306 76 56 chr5 97538316 97538760 -105546772 - L2 LINE L2 -172 3100 2649 198 245 234 0 chr5 97539606 97539700 -105545832 + MIR SINE MIR 123 238 -24 2198 103 0 0 chr5 97539714 97540032 -105545500 - AluSg SINE Alu 0 318 1 202 205 0 0 chr5 97541428 97541467 -105544065 + GA-rich Low_complexity Low_complexity 2 40 0 321 231 22 3 chr5 97541799 97542045 -105543487 + (CA)n Simple_repeat Simple_repeat 1 250 0 1360 271 238 18 chr5 97542987 97543804 -105541728 + L2 LINE L2 1637 2632 -682 2489 232 12 21 chr5 97543840 97543920 -105541612 + L1MC3 LINE L1 7124 7203 -582 2398 94 0 0 chr5 97543920 97544217 -105541315 + AluSq SINE Alu 1 297 -16 2489 232 12 21 chr5 97544217 97544788 -105540744 + L1MC3 LINE L1 7203 7769 -16 319 308 103 0 chr5 97544819 97544936 -105540596 + L2 LINE L2 2705 2833 -481 266 345 0 34 chr5 97545169 97545288 -105540244 + L2 LINE L2 3199 3313 0 277 332 124 25 chr5 97545984 97546186 -105539346 + MIR SINE MIR 20 241 -21 276 341 74 56 chr5 97546819 97547089 -105538443 - L2 LINE L2 -3 3269 2995 541 265 88 6 chr5 97548849 97549030 -105536502 + MIR SINE MIR 35 230 -32 436 174 28 11 chr5 97549486 97549639 -105535893 + MER20 DNA MER1_type 3 208 -11 2044 133 7 0 chr5 97549639 97549939 -105535593 + AluSx SINE Alu 1 302 0 391 261 27 18 chr5 97550416 97550527 -105535005 + MIR SINE MIR 18 129 -79 1104 221 120 77 chr5 97550554 97550620 -105534912 - MLT1C LTR MaLR 0 467 405 2323 100 0 0 chr5 97550620 97550920 -105534612 + AluSx SINE Alu 1 300 -12 1104 221 120 77 chr5 97550920 97551296 -105534236 - MLT1C LTR MaLR -62 405 6 2522 77 0 0 chr5 97551344 97551641 -105533891 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr5 97551641 97551662 -105533870 + AT_rich Low_complexity Low_complexity 1 21 0 184 240 14 48 chr5 97553008 97553100 -105532432 + CT-rich Low_complexity Low_complexity 2 89 -53 2127 102 6 16 chr5 97553100 97553413 -105532119 - AluSx SINE Alu -1 311 2 184 240 14 48 chr5 97553413 97553466 -105532066 + CT-rich Low_complexity Low_complexity 89 142 0 236 351 45 8 chr5 97553759 97553893 -105531639 - MIR3 SINE MIR -50 158 20 317 373 16 0 chr5 97554592 97554718 -105530814 + MIR SINE MIR 62 189 -73 2522 56 0 0 chr5 97554719 97555024 -105530508 + AluY SINE Alu 1 305 -6 266 302 99 0 chr5 97555247 97555352 -105530180 - MIR SINE MIR -61 147 33 215 171 0 0 chr5 97556219 97556260 -105529272 - MIR SINE MIR -118 144 104 203 86 0 29 chr5 97557425 97557460 -105528072 + (TCC)n Simple_repeat Simple_repeat 2 35 0 384 336 7 34 chr5 97557511 97557657 -105527875 - L2 LINE L2 -1 3312 3171 479 189 0 38 chr5 97557713 97557898 -105527634 + (TG)n Simple_repeat Simple_repeat 1 178 0 261 231 19 19 chr5 97557910 97558066 -105527466 + (TG)n Simple_repeat Simple_repeat 2 157 0 198 103 0 0 chr5 97558155 97558184 -105527348 + (TC)n Simple_repeat Simple_repeat 2 30 0 465 333 47 0 chr5 97558595 97558787 -105526745 + MIR SINE MIR 48 248 -14 441 234 0 138 chr5 97560994 97561212 -105524320 - MER53 DNA DNA -1 188 1 854 169 13 7 chr5 97561271 97561425 -105524107 - LTR32 LTR ERVL 0 471 317 2119 95 7 0 chr5 97561446 97561760 -105523772 + AluSq SINE Alu 1 316 0 1646 187 33 3 chr5 97561799 97562099 -105523433 - LTR32 LTR ERVL -119 352 44 385 273 10 0 chr5 97562744 97562843 -105522689 - MER113 DNA MER1_type? -109 412 313 340 288 34 17 chr5 97563091 97563209 -105522323 - MIR SINE MIR -114 148 29 211 308 49 56 chr5 97563623 97563766 -105521766 + MIR SINE MIR 3 144 -118 689 146 146 122 chr5 97563904 97564109 -105521423 - MER20 DNA MER1_type -6 213 4 787 192 0 117 chr5 97564120 97564247 -105521285 - MER5A DNA MER1_type 0 189 95 2116 95 3 46 chr5 97564247 97564573 -105520959 - AluSp SINE Alu -1 312 1 787 192 0 117 chr5 97564573 97564659 -105520873 - MER5A DNA MER1_type -94 95 1 348 308 192 0 chr5 97565604 97565776 -105519756 - MIR SINE MIR -35 227 23 274 267 0 67 chr5 97565779 97565884 -105519648 + MIR SINE MIR 119 216 -46 299 300 20 10 chr5 97566479 97566579 -105518953 - MIR SINE MIR -6 256 156 402 302 50 7 chr5 97566780 97566919 -105518613 - MIR SINE MIR -116 146 2 278 308 22 0 chr5 97567157 97567248 -105518284 + MER5A DNA MER1_type 68 160 -29 492 169 102 17 chr5 97567393 97567511 -105518021 + MIR SINE MIR 4 131 -131 407 333 13 19 chr5 97567885 97568044 -105517488 - MIR3 SINE MIR -22 186 29 333 259 60 78 chr5 97568753 97568869 -105516663 - MIR SINE MIR -66 142 29 547 347 17 53 chr5 97569379 97569736 -105515796 - L2 LINE L2 -52 3220 2877 486 261 15 23 chr5 97571349 97571437 -105514095 - MER45 DNA AcHobo -2 1579 1491 797 182 87 65 chr5 97571437 97571480 -105514052 + MER46A DNA MER2_type 1 42 -2689 1412 145 83 47 chr5 97571480 97571756 -105513776 + AluJb SINE Alu 2 287 -25 797 182 87 65 chr5 97571756 97571943 -105513589 + MER46A DNA MER2_type 42 236 0 486 261 15 23 chr5 97571943 97571984 -105513548 - MER45 DNA AcHobo -90 1491 1451 * 1089 175 33 0 chr5 97571972 97572155 -105513377 - MER45 DNA AcHobo -851 189 1 1640 158 63 27 chr5 97572498 97572652 -105512880 - MLT1B LTR MaLR -43 347 200 2205 112 0 3 chr5 97572652 97572966 -105512566 - AluSq SINE Alu 0 313 1 1640 158 63 27 chr5 97572966 97573146 -105512386 - MLT1B LTR MaLR -190 200 1 950 201 52 43 chr5 97574163 97574297 -105511235 - MLT1D LTR MaLR 0 486 355 2235 98 0 16 chr5 97574297 97574603 -105510929 + AluSx SINE Alu 1 301 -11 950 201 52 43 chr5 97574603 97574898 -105510634 - MLT1D LTR MaLR -131 355 1 376 300 27 0 chr5 97574899 97575009 -105510523 - MIR SINE MIR -106 156 44 378 318 31 0 chr5 97575191 97575320 -105510212 + L2 LINE L2 3138 3270 -2 239 256 47 35 chr5 97576845 97576931 -105508601 + L2 LINE L2 3096 3182 -90 622 316 45 20 chr5 97576962 97577206 -105508326 - MIR SINE MIR -9 253 4 237 271 17 0 chr5 97577217 97577276 -105508256 + L2 LINE L2 3213 3272 0 251 273 62 70 chr5 97577447 97577575 -105507957 - MIR SINE MIR -108 154 28 461 257 69 42 chr5 97578407 97578551 -105506981 - L2 LINE L2 -4 3309 3162 925 286 86 37 chr5 97578722 97579232 -105506300 - L2 LINE L2 -411 2903 2369 364 296 165 24 chr5 97579958 97580286 -105505246 - L2 LINE L2 0 3313 2940 1117 104 0 25 chr5 97581428 97581591 -105503941 + AluSg/x SINE Alu 136 294 -18 294 313 119 11 chr5 97581924 97582100 -105503432 + MIR SINE MIR 60 254 -8 234 156 0 0 chr5 97582103 97582148 -105503384 + (CACCAT)n Simple_repeat Simple_repeat 1 45 0 359 282 55 83 chr5 97582959 97583140 -105502392 - MER5B DNA MER1_type 0 178 3 411 272 86 95 chr5 97583144 97583158 -105502374 + MIR SINE MIR 1 14 -248 2333 97 0 0 chr5 97583158 97583469 -105502063 + AluSx SINE Alu 1 311 -1 411 272 86 95 chr5 97583469 97583697 -105501835 + MIR SINE MIR 14 241 -21 892 219 260 94 chr5 97583863 97584198 -105501334 - L1ME LINE L1 -4869 1211 933 2228 170 50 29 chr5 97584198 97584615 -105500917 - MSTB LTR MaLR 0 426 1 8148 228 18 10 chr5 97584615 97586253 -105499279 - MSTB-int LTR MaLR 0 1651 1 2015 190 43 31 chr5 97586253 97586301 -105499231 - MSTB LTR MaLR 0 426 380 333 0 0 0 chr5 97586301 97586338 -105499194 + (CA)n Simple_repeat Simple_repeat 2 38 0 2015 190 43 31 chr5 97586338 97586537 -105498995 - MSTB LTR MaLR -46 380 169 2199 100 3 7 chr5 97586537 97586847 -105498685 + AluSc SINE Alu 1 309 0 2015 190 43 31 chr5 97586847 97587019 -105498513 - MSTB LTR MaLR -257 169 1 892 219 260 94 chr5 97587019 97587774 -105497758 - L1ME LINE L1 -5146 934 10 2256 107 0 0 chr5 97587807 97588115 -105497417 - AluSx SINE Alu -4 308 1 958 163 157 6 chr5 97588315 97588493 -105497039 + MER3 DNA MER1_type 1 205 -4 1510 157 41 66 chr5 97588584 97588902 -105496630 + AluJb SINE Alu 1 310 -2 1568 184 0 17 chr5 97589069 97589363 -105496169 - AluJo SINE Alu -19 293 5 452 303 103 22 chr5 97589670 97589855 -105495677 + MIR SINE MIR 18 217 -45 481 128 2 5 chr5 97590434 97590510 -105495022 + THE1C LTR MaLR 307 373 -2 191 349 47 0 chr5 97591098 97591184 -105494348 - MIR SINE MIR 0 262 173 739 162 0 8 chr5 97591505 97591622 -105493910 - FLAM_C SINE Alu -26 117 2 233 272 158 44 chr5 97591727 97591841 -105493691 - MIR SINE MIR -73 189 63 602 311 70 11 chr5 97592320 97592593 -105492939 + L1MC/D LINE L1 5352 5640 -2168 1333 173 16 0 chr5 97592879 97593133 -105492399 - AluSq SINE Alu -55 258 1 180 111 0 0 chr5 97593144 97593171 -105492361 + (TTA)n Simple_repeat Simple_repeat 3 29 0 471 256 15 51 chr5 97594411 97594548 -105490984 - MIR SINE MIR -85 177 46 201 95 0 48 chr5 97594742 97594784 -105490748 + (TG)n Simple_repeat Simple_repeat 1 40 0 352 191 67 22 chr5 97595056 97595145 -105490387 + MER5A DNA MER1_type 16 108 -81 803 141 14 21 chr5 97595595 97595737 -105489795 + AluJb SINE Alu 170 310 -2 356 259 9 45 chr5 97595944 97596056 -105489476 - MIR SINE MIR -3 259 152 * 742 226 69 46 chr5 97596053 97596270 -105489262 + MIR SINE MIR 5 226 -36 1570 148 43 53 chr5 97596270 97596573 -105488959 + AluJb SINE Alu 1 300 -12 482 211 11 0 chr5 97596584 97596679 -105488853 - MIR SINE MIR -91 171 76 205 195 110 49 chr5 97597993 97598075 -105487457 + L2 LINE L2 3221 3307 -6 922 160 0 33 chr5 97598348 97598529 -105487003 + AluSg/x SINE Alu 112 286 -24 223 365 19 19 chr5 97598550 97598654 -105486878 - MIR SINE MIR 0 262 159 361 341 71 6 chr5 97598724 97598894 -105486638 - MIR SINE MIR -76 186 6 1589 135 77 116 chr5 97599014 97599376 -105486156 - Tigger3(Golem) DNA MER2_type -1 3028 1 625 238 0 0 chr5 97599378 97599500 -105486032 - MER5B DNA MER1_type -54 124 3 646 243 21 37 chr5 97599537 97599562 -105485970 - MLT1H LTR MaLR -16 533 509 2067 131 3 3 chr5 97599562 97599868 -105485664 + AluSx SINE Alu 1 306 -6 646 243 21 37 chr5 97599868 97600031 -105485501 - MLT1H LTR MaLR -40 509 348 488 252 14 21 chr5 97600060 97600203 -105485329 - MLT1H LTR MaLR -379 170 29 634 203 8 0 chr5 97600449 97600567 -105484965 + MER117 DNA MER1_type 41 159 -38 200 190 19 44 chr5 97601240 97601398 -105484134 + (CATA)n Simple_repeat Simple_repeat 1 154 0 186 167 30 15 chr5 97601465 97601531 -105484001 + (CATA)n Simple_repeat Simple_repeat 4 70 0 377 223 8 0 chr5 97601532 97601662 -105483870 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 386 229 99 23 chr5 97601914 97602045 -105483487 + L2 LINE L2 3166 3306 -7 221 318 0 0 chr5 97602277 97602343 -105483189 + MIR SINE MIR 92 157 -105 1695 226 97 66 chr5 97602763 97603338 -105482194 - MLT1G1 LTR MaLR -2 593 1 343 241 30 142 chr5 97603338 97603449 -105482083 - MIR SINE MIR -60 202 122 754 173 39 0 chr5 97603449 97603576 -105481956 + FLAM_C SINE Alu 2 133 0 343 241 30 142 chr5 97603576 97603675 -105481857 - MIR SINE MIR -140 122 14 2124 107 7 3 chr5 97604243 97604553 -105480979 - AluSq SINE Alu -2 311 1 252 340 75 7 chr5 97604625 97604772 -105480760 - L2 LINE L2 -1006 2308 2152 252 211 180 124 chr5 97604977 97605035 -105480497 - MER5B DNA MER1_type -8 170 117 1519 167 133 0 chr5 97605035 97605298 -105480234 + AluJo SINE Alu 3 300 -2 252 211 180 124 chr5 97605298 97605400 -105480132 - MER5B DNA MER1_type -61 117 1 367 295 90 36 chr5 97605978 97606040 -105479492 - MLT1J1 LTR MaLR -33 413 356 2022 133 10 0 chr5 97606040 97606348 -105479184 - AluSq SINE Alu -2 311 1 367 295 90 36 chr5 97606348 97606551 -105478981 - MLT1J1 LTR MaLR -90 356 84 676 221 84 21 chr5 97606686 97606876 -105478656 - MER20 DNA MER1_type -17 202 1 318 266 64 9 chr5 97607242 97607351 -105478181 - MIR3 SINE MIR 0 208 94 2017 99 7 11 chr5 97607607 97607934 -105477598 - AluSp SINE Alu 0 326 1 207 0 0 0 chr5 97607947 97607970 -105477562 + (A)n Simple_repeat Simple_repeat 1 23 0 1230 159 5 10 chr5 97608612 97608819 -105476713 + AluSx SINE Alu 1 206 -106 608 216 23 28 chr5 97609033 97609209 -105476323 - AluSx SINE Alu -136 176 2 365 217 17 109 chr5 97609216 97609391 -105476141 + L1MC/D LINE L1 5646 5804 -2004 1912 104 15 0 chr5 97609613 97609872 -105475660 + AluSx SINE Alu 27 289 -23 933 161 0 0 chr5 97610366 97610515 -105475017 - FRAM SINE Alu -3 173 25 336 361 39 20 chr5 97611170 97611371 -105474161 + MIR SINE MIR 20 228 -34 651 285 91 14 chr5 97611731 97612082 -105473450 - L1MC4a LINE L1 -1635 6173 5796 183 129 0 0 chr5 97613086 97613117 -105472415 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 31 0 0 chr5 97613425 97613457 -105472075 + AT_rich Low_complexity Low_complexity 1 32 0 713 207 122 58 chr5 97613606 97613839 -105471693 + MER96B DNA MER1_type? 68 329 -88 2282 90 0 3 chr5 97613839 97614139 -105471393 - AluSx SINE Alu -13 299 1 713 207 122 58 chr5 97614139 97614234 -105471298 + MER96B DNA MER1_type? 329 417 0 2234 92 7 0 chr5 97615343 97615649 -105469883 + AluSx SINE Alu 1 308 -4 180 222 67 0 chr5 97615816 97615861 -105469671 - MIR SINE MIR -122 140 93 396 355 71 6 chr5 97616581 97616750 -105468782 - MIR SINE MIR -12 250 71 328 271 45 30 chr5 97617210 97617343 -105468189 + MIR3 SINE MIR 20 154 -54 467 134 12 0 chr5 97617494 97617576 -105467956 + CT-rich Low_complexity Low_complexity 4 86 0 324 361 0 0 chr5 97618264 97618361 -105467171 + polypurine Low_complexity Low_complexity 4 100 0 2130 130 0 0 chr5 97618380 97618679 -105466853 + AluSq SINE Alu 1 299 -14 2037 110 7 0 chr5 97618679 97618968 -105466564 + AluY SINE Alu 1 293 -18 598 259 93 31 chr5 97619669 97619862 -105465670 - MIR SINE MIR -55 207 3 224 333 22 0 chr5 97621081 97621171 -105464361 + MIR3 SINE MIR 83 174 -34 268 325 25 0 chr5 97621231 97621351 -105464181 + L2 LINE L2 2933 3055 -217 196 314 86 19 chr5 97621800 97621905 -105463627 - L2 LINE L2 -227 3045 2934 2148 178 10 33 chr5 97621910 97622309 -105463223 - MLT1B LTR MaLR 0 390 1 395 329 22 15 chr5 97623100 97623237 -105462295 + MIR SINE MIR 46 183 -79 2361 62 0 3 chr5 97623859 97624150 -105461382 + AluY SINE Alu 1 290 -21 331 382 0 7 chr5 97624163 97624307 -105461225 - MIR SINE MIR -110 152 10 441 215 20 3 chr5 97624520 97624643 -105460889 - MER5A DNA MER1_type -62 116 4 2346 94 0 0 chr5 97624938 97625245 -105460287 + AluSx SINE Alu 1 307 -5 1860 165 0 3 chr5 97625536 97625845 -105459687 - AluJo SINE Alu -4 308 1 256 327 44 53 chr5 97626139 97626280 -105459252 + L2 LINE L2 2581 2721 -593 1013 271 52 12 chr5 97626280 97626608 -105458924 - MER58B DNA MER1_type 0 341 1 256 327 44 53 chr5 97626608 97626692 -105458840 + L2 LINE L2 2721 2804 -510 1694 233 44 20 chr5 97627035 97627220 -105458312 + MLT1C LTR MaLR 1 180 -287 821 186 0 0 chr5 97627220 97627349 -105458183 + FLAM_C SINE Alu 3 131 -2 1694 233 44 20 chr5 97627349 97627618 -105457914 + MLT1C LTR MaLR 180 466 -1 25 0 0 0 chr5 97628158 97628183 -105457349 + AT_rich Low_complexity Low_complexity 1 25 0 978 105 0 0 chr5 97628329 97628462 -105457070 + AluSx SINE Alu 1 133 -180 1020 156 0 0 chr5 97628470 97628650 -105456882 + (TA)n Simple_repeat Simple_repeat 1 180 0 312 27 0 0 chr5 97628650 97628687 -105456845 + (CA)n Simple_repeat Simple_repeat 1 37 0 1064 136 34 11 chr5 97628687 97628863 -105456669 + AluSx SINE Alu 123 302 -8 413 321 72 5 chr5 97629084 97629277 -105456255 + MIR SINE MIR 9 214 -48 1980 128 17 3 chr5 97629880 97630178 -105455354 - AluSx SINE Alu -10 302 1 1505 237 47 11 chr5 97630201 97630560 -105454972 - MLT2B2 LTR ERVL 0 515 144 248 164 15 0 chr5 97630598 97630665 -105454867 + CT-rich Low_complexity Low_complexity 2 69 0 464 159 0 118 chr5 97630908 97631078 -105454454 - AluJb SINE Alu -74 238 89 436 277 0 0 chr5 97631434 97631528 -105454004 + MLT1H LTR MaLR 71 164 -385 459 198 11 1 chr5 97633042 97633139 -105452393 + MIR SINE MIR 51 148 -60 277 333 49 21 chr5 97633688 97633832 -105451700 + MIR3 SINE MIR 25 172 -36 892 216 42 28 chr5 97634777 97634990 -105450542 + MER20 DNA MER1_type 4 219 0 363 105 0 0 chr5 97635114 97635171 -105450361 + (TG)n Simple_repeat Simple_repeat 1 57 0 517 254 96 23 chr5 97635671 97635848 -105449684 - MIR SINE MIR -12 250 61 274 298 226 16 chr5 97636335 97636381 -105449151 + L2 LINE L2 1882 1917 -1397 2050 131 0 6 chr5 97636381 97636693 -105448839 - AluSx SINE Alu -2 310 1 274 298 226 16 chr5 97636693 97636965 -105448567 + L2 LINE L2 1917 2267 -1047 302 302 42 26 chr5 97637199 97637391 -105448141 + L2 LINE L2 2644 2838 -476 285 188 26 51 chr5 97637775 97637892 -105447640 + A-rich Low_complexity Low_complexity 3 116 0 1786 123 28 31 chr5 97637949 97638267 -105447265 - THE1B LTR MaLR -27 337 21 286 294 24 0 chr5 97638997 97639082 -105446450 - MIR3 SINE MIR -49 159 73 2169 108 3 3 chr5 97639355 97639661 -105445871 - AluSx SINE Alu -4 308 3 400 350 0 0 chr5 97640531 97640711 -105444821 + (TG)n Simple_repeat Simple_repeat 1 180 0 378 0 0 0 chr5 97640945 97640987 -105444545 + (TG)n Simple_repeat Simple_repeat 1 42 0 610 234 17 101 chr5 97641828 97641858 -105443674 + MIR SINE MIR 3 34 -228 2148 110 0 3 chr5 97641858 97642157 -105443375 + AluSg SINE Alu 1 298 -12 2042 110 0 44 chr5 97642157 97642474 -105443058 + AluY SINE Alu 1 303 -8 610 234 17 101 chr5 97642474 97642669 -105442863 + MIR SINE MIR 32 214 -48 430 246 66 10 chr5 97643560 97643693 -105441839 - MIR SINE MIR -52 156 16 498 243 9 0 chr5 97644015 97644126 -105441406 + MIR SINE MIR 34 145 -63 293 207 111 74 chr5 97644504 97644639 -105440893 + MIR SINE MIR 47 186 -76 679 238 75 0 chr5 97644805 97644965 -105440567 - MER96 DNA MER1_type? 0 175 4 749 270 121 43 chr5 97645944 97646463 -105439069 - L2 LINE L2 0 3313 2774 2011 131 48 45 chr5 97646592 97646966 -105438566 + THE1C LTR MaLR 1 375 0 1701 224 57 18 chr5 97647210 97647648 -105437884 - MLT1C LTR MaLR -7 460 6 304 318 48 8 chr5 97647754 97647880 -105437652 - MIR SINE MIR -62 146 16 393 329 139 9 chr5 97648559 97648775 -105436757 + MIR SINE MIR 16 259 -3 268 238 234 59 chr5 97648960 97649263 -105436269 + L2 LINE L2 2253 2608 -706 187 331 95 67 chr5 97649354 97649713 -105435819 + L2 LINE L2 2595 2963 -351 393 214 0 0 chr5 97650415 97650513 -105435019 + (CA)n Simple_repeat Simple_repeat 2 99 0 183 42 0 0 chr5 97650601 97650625 -105434907 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 305 269 41 88 chr5 97650667 97650838 -105434694 - MIR3 SINE MIR -51 157 8 307 294 185 0 chr5 97651132 97651251 -105434281 + L2 LINE L2 3132 3272 0 464 270 20 14 chr5 97652303 97652451 -105433081 + MIR SINE MIR 12 160 -102 254 364 8 34 chr5 97653116 97653234 -105432298 - L2 LINE L2 0 3313 3199 1161 227 123 24 chr5 97653377 97653751 -105431781 - MLT1C LTR MaLR -17 450 40 212 338 12 12 chr5 97654036 97654116 -105431416 + MIR3 SINE MIR 101 180 -28 508 299 39 0 chr5 97655040 97655194 -105430338 + MIR SINE MIR 70 229 -33 1265 177 28 45 chr5 97655744 97655796 -105429736 - L1MB5 LINE L1 0 6174 6123 1911 141 7 3 chr5 97655796 97656087 -105429445 + AluJo SINE Alu 13 304 -8 1265 177 28 45 chr5 97656087 97656322 -105429210 - L1MB5 LINE L1 -51 6123 5892 380 301 38 0 chr5 97656481 97656614 -105428918 + MIR3 SINE MIR 30 167 -41 347 287 154 5 chr5 97657403 97657591 -105427941 + MIR SINE MIR 34 249 -13 512 261 152 38 chr5 97658670 97658881 -105426651 - MIR SINE MIR 0 262 28 214 179 0 71 chr5 97658912 97658968 -105426564 - MIR3 SINE MIR -11 197 146 1955 204 64 31 chr5 97659423 97659875 -105425657 - MLT1C LTR MaLR 0 467 1 273 350 39 0 chr5 97659945 97660048 -105425484 - L2 LINE L2 -2 3270 3164 344 297 91 8 chr5 97661185 97661363 -105424169 - MIR SINE MIR -37 225 34 298 265 33 66 chr5 97661912 97662063 -105423469 + MIR SINE MIR 67 212 -50 1366 312 60 27 chr5 97663257 97664534 -105420998 - L1MC4a LINE L1 -743 5403 4614 333 68 0 0 chr5 97664541 97664585 -105420947 + (TG)n Simple_repeat Simple_repeat 2 45 0 271 208 0 0 chr5 97664695 97664743 -105420789 + MER91 DNA MER1_type 1 48 -92 543 196 150 0 chr5 97664850 97664983 -105420549 - MIR SINE MIR -25 237 85 335 306 8 0 chr5 97665032 97665153 -105420379 + (CA)n Simple_repeat Simple_repeat 1 122 0 183 267 0 0 chr5 97665167 97665242 -105420290 + (CA)n Simple_repeat Simple_repeat 1 75 0 188 348 0 0 chr5 97665484 97665553 -105419979 + MIR SINE MIR 175 243 -19 1712 179 21 0 chr5 97666230 97666521 -105419011 + AluSx SINE Alu 1 297 -15 1705 134 11 14 chr5 97667094 97667369 -105418163 - AluSx SINE Alu 0 312 39 866 140 0 22 chr5 97667380 97667516 -105418016 - FLAM_C SINE Alu 0 133 1 206 295 53 42 chr5 97667774 97667869 -105417663 - MIR SINE MIR -102 160 65 188 179 0 26 chr5 97668069 97668108 -105417424 + L2 LINE L2 3269 3306 -7 575 283 88 4 chr5 97668246 97668472 -105417060 + MIR SINE MIR 18 262 0 229 212 145 60 chr5 97669224 97669345 -105416187 + MIR SINE MIR 2 129 -102 288 278 199 7 chr5 97671049 97671200 -105414332 + L3 LINE CR1 1314 1493 -84 256 258 11 54 chr5 97671200 97671386 -105414146 + (ATG)n Simple_repeat Simple_repeat 3 180 0 237 132 0 0 chr5 97671443 97671481 -105414051 + (ATG)n Simple_repeat Simple_repeat 1 38 0 522 324 69 16 chr5 97671481 97671728 -105413804 - MIR SINE MIR -1 261 2 207 302 103 32 chr5 97672149 97672275 -105413257 + L2 LINE L2 2919 3053 -219 2399 73 0 16 chr5 97672286 97672599 -105412933 - AluY SINE Alu -3 308 1 396 103 0 0 chr5 97672621 97672679 -105412853 + (TC)n Simple_repeat Simple_repeat 1 58 0 303 173 0 0 chr5 97672678 97672759 -105412773 + (CA)n Simple_repeat Simple_repeat 1 81 0 * 450 248 107 20 chr5 97673059 97673208 -105412324 - MLT1K LTR MaLR -287 301 140 2556 259 54 45 chr5 97673358 97674528 -105411004 - L1MC4 LINE L1 0 8042 6863 348 24 0 0 chr5 97674824 97674865 -105410667 + (TG)n Simple_repeat Simple_repeat 1 41 0 413 326 70 5 chr5 97674949 97675136 -105410396 + MIR SINE MIR 10 208 -54 324 306 132 0 chr5 97676016 97676160 -105409372 + MIR SINE MIR 31 193 -69 313 203 0 54 chr5 97676987 97677061 -105408471 + L2 LINE L2 3156 3225 -47 1035 247 149 22 chr5 97677624 97678074 -105407458 + LTR33A LTR ERVL 11 517 -6 391 311 196 15 chr5 97678849 97679305 -105406227 + L2 LINE L2 2682 3272 0 353 278 78 42 chr5 97680473 97680573 -105404959 + MIR SINE MIR 47 142 -120 1674 129 204 30 chr5 97680573 97680936 -105404596 + MSTB LTR MaLR 1 426 0 353 278 78 42 chr5 97680936 97681026 -105404506 + MIR SINE MIR 142 244 -18 275 227 41 41 chr5 97681400 97681497 -105404035 - MIR3 SINE MIR -1 207 111 256 246 108 60 chr5 97681759 97681907 -105403625 + MIR3 SINE MIR 2 155 -53 252 272 68 39 chr5 97681954 97682057 -105403475 - MIR3 SINE MIR -2 206 101 267 31 0 0 chr5 97683603 97683635 -105401897 + (TG)n Simple_repeat Simple_repeat 1 32 0 302 325 66 30 chr5 97683868 97684034 -105401498 + MIR3 SINE MIR 1 172 -36 429 223 13 6 chr5 97684082 97684239 -105401293 + (TCCA)n Simple_repeat Simple_repeat 2 159 0 489 344 50 21 chr5 97684239 97684518 -105401014 - L2 LINE L2 0 3272 2986 317 273 20 20 chr5 97685602 97685701 -105399831 - MIR3 SINE MIR -1 207 109 321 168 93 1 chr5 97685876 97685960 -105399572 + MER69 DNA AcHobo 64 2502 -24 329 335 87 19 chr5 97686694 97686855 -105398677 - MIR SINE MIR -52 210 39 207 333 75 21 chr5 97687176 97687269 -105398263 + MIR SINE MIR 87 184 -78 203 308 64 0 chr5 97687974 97688052 -105397480 + MIR SINE MIR 66 148 -60 261 284 93 10 chr5 97688411 97688605 -105396927 - MLT1C LTR MaLR -19 448 239 890 243 65 4 chr5 97688828 97689104 -105396428 - MLT1C LTR MaLR -174 293 1 220 200 36 0 chr5 97689835 97689890 -105395642 + MIR SINE MIR 35 91 -117 418 265 124 27 chr5 97690395 97690542 -105394990 + MIR SINE MIR 5 162 -63 715 220 71 6 chr5 97692465 97692633 -105392899 + MER5A DNA MER1_type 1 179 -10 566 283 6 12 chr5 97693024 97693190 -105392342 - MER63B DNA MER1_type -266 170 6 422 289 108 16 chr5 97693314 97693508 -105392024 - MIR SINE MIR -33 229 18 222 225 117 81 chr5 97694500 97694611 -105390921 - L2 LINE L2 0 3272 3158 362 85 17 0 chr5 97694628 97694687 -105390845 + (GGA)n Simple_repeat Simple_repeat 3 62 0 181 340 75 0 chr5 97696358 97696452 -105389080 - L2 LINE L2 -5 3267 3167 872 171 39 60 chr5 97696459 97696690 -105388842 - MER20 DNA MER1_type 0 219 6 264 355 0 0 chr5 97697209 97697285 -105388247 - L2 LINE L2 0 3313 3238 359 169 27 20 chr5 97698678 97698826 -105386706 + (CAGAGA)n Simple_repeat Simple_repeat 2 150 0 702 134 14 28 chr5 97699414 97699556 -105385976 + MLT2B2 LTR ERVL 1 140 -375 235 314 0 0 chr5 97700338 97700408 -105385124 + L2 LINE L2 3203 3272 0 389 369 54 6 chr5 97700723 97700891 -105384641 + MIR SINE MIR 2 177 -85 398 298 22 9 chr5 97701497 97701642 -105383890 + MIR SINE MIR 9 160 -61 459 0 0 0 chr5 97701727 97701778 -105383754 + (TG)n Simple_repeat Simple_repeat 2 52 0 431 253 6 22 chr5 97701936 97702114 -105383418 + (TATG)n Simple_repeat Simple_repeat 4 178 0 308 296 28 0 chr5 97702142 97702213 -105383319 - L1MC4 LINE L1 -1356 6686 6614 198 71 0 0 chr5 97702244 97702272 -105383260 + (TATG)n Simple_repeat Simple_repeat 1 28 0 239 310 23 16 chr5 97702286 97702415 -105383117 + (TATG)n Simple_repeat Simple_repeat 1 130 0 351 343 83 32 chr5 97703276 97703492 -105382040 - L1ME3A LINE L1 -150 6020 5794 329 268 143 38 chr5 97703562 97703771 -105381761 - L1ME3A LINE L1 -513 5657 5427 1133 147 48 17 chr5 97703869 97704100 -105381432 + THE1B LTR MaLR 1 238 -126 1043 192 5 24 chr5 97904443 97904651 -105180881 + MER3 DNA MER1_type 1 204 -5 406 363 60 58 chr5 97904812 97905278 -105180254 - L2 LINE L2 -1 3271 2805 233 283 151 19 chr5 97905299 97905405 -105180127 + L2 LINE L2 3152 3271 -1 30409 98 10 14 chr5 97905520 97911251 -105174281 - L1PA7 LINE L1 -11 6458 724 231 136 15 30 chr5 97911667 97911733 -105173799 + CT-rich Low_complexity Low_complexity 2 66 0 435 52 0 0 chr5 97911733 97911791 -105173741 + (CA)n Simple_repeat Simple_repeat 1 58 0 1994 114 21 0 chr5 97913355 97913645 -105171887 - AluY SINE Alu -15 296 1 249 231 0 0 chr5 97914089 97914141 -105171391 - MIR3 SINE MIR -49 159 108 1652 180 0 7 chr5 97914325 97914608 -105170924 - AluJb SINE Alu -31 281 1 437 15 0 62 chr5 97915605 97915694 -105169838 + L1PA2 LINE L1 6091 6155 0 203 257 95 86 chr5 97916094 97916199 -105169333 + L3 LINE CR1 1385 1490 -87 249 33 0 0 chr5 97917681 97917711 -105167821 + (T)n Simple_repeat Simple_repeat 1 30 0 386 338 27 7 chr5 97918662 97918810 -105166722 + L2 LINE L2 3158 3308 -5 1454 188 7 33 chr5 97919088 97919392 -105166140 - AluJo SINE Alu -16 296 1 420 300 79 0 chr5 97919404 97919544 -105165988 + MIR SINE MIR 106 256 -6 213 279 59 15 chr5 97921261 97921329 -105164203 - L2 LINE L2 -16 3297 3227 1390 317 214 14 chr5 97922439 97923382 -105162150 + L3 LINE CR1 445 1576 -1 532 224 26 51 chr5 97923735 97923891 -105161641 + MIR SINE MIR 55 206 -56 190 282 77 27 chr5 97924545 97924679 -105160853 - MIR SINE MIR -52 156 16 23 0 0 0 chr5 97925608 97925631 -105159901 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr5 97928324 97928349 -105157183 + (T)n Simple_repeat Simple_repeat 1 25 0 21 71 0 0 chr5 97928599 97928641 -105156891 + AT_rich Low_complexity Low_complexity 1 42 0 1499 142 35 0 chr5 97929835 97930095 -105155437 + L1MA5A LINE L1 6026 6294 -3 199 240 104 31 chr5 97930130 97930226 -105155306 - MER5C DNA MER1_type -11 313 211 814 258 51 39 chr5 97930792 97931048 -105154484 - MIR SINE MIR -2 260 2 218 336 164 14 chr5 97931232 97931466 -105154066 + L2 LINE L2 2783 3049 -223 904 240 32 5 chr5 97931569 97931786 -105153746 + MER58A DNA MER1_type 1 223 -1 33 25 0 0 chr5 97931910 97931950 -105153582 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 97932113 97932136 -105153396 + AT_rich Low_complexity Low_complexity 1 23 0 1214 191 84 43 chr5 97933114 97933413 -105152119 - AluJb SINE Alu -1 311 1 2423 130 33 51 chr5 97933433 97933924 -105151608 + L1MA3 LINE L1 5824 6305 0 21 0 0 0 chr5 97935545 97935566 -105149966 + AT_rich Low_complexity Low_complexity 1 21 0 186 164 15 45 chr5 97939073 97939140 -105146392 + CT-rich Low_complexity Low_complexity 2 66 0 361 324 97 60 chr5 97941152 97941522 -105144010 + L2 LINE L2 2883 3266 -6 278 360 33 47 chr5 97941720 97941931 -105143601 + MIR SINE MIR 26 233 -29 496 300 72 52 chr5 97946355 97946662 -105138870 - L2 LINE L2 -40 3273 2961 308 341 18 55 chr5 97946628 97946792 -105138740 + MIR SINE MIR 34 191 -71 * 24 0 0 0 chr5 97946878 97946902 -105138630 + AT_rich Low_complexity Low_complexity 1 24 0 2271 106 0 3 chr5 97947455 97947757 -105137775 + AluSq SINE Alu 1 301 -12 198 0 0 0 chr5 97948928 97948950 -105136582 + (A)n Simple_repeat Simple_repeat 1 22 0 322 275 173 30 chr5 97949371 97949549 -105135983 + MIR3 SINE MIR 2 205 -3 216 0 0 0 chr5 97949555 97949579 -105135953 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 769 170 31 0 chr5 97949811 97949958 -105135574 - MIR SINE MIR -45 217 64 244 303 13 0 chr5 97950626 97950702 -105134830 + CT-rich Low_complexity Low_complexity 2 78 0 324 64 0 0 chr5 97951247 97951294 -105134238 + (TC)n Simple_repeat Simple_repeat 2 48 0 697 304 81 26 chr5 97951950 97952295 -105133237 - L3b LINE CR1 -2 1581 1218 1806 182 10 0 chr5 97953152 97953459 -105132073 + AluJo SINE Alu 1 310 -2 431 250 54 9 chr5 97953659 97953771 -105131761 - L2 LINE L2 0 3313 3197 2249 80 0 20 chr5 97955730 97956030 -105129502 - AluSc SINE Alu -11 298 5 394 331 0 42 chr5 97956145 97956287 -105129245 - MIR SINE MIR -109 153 18 1095 92 92 0 chr5 97957677 97957829 -105127703 - AluSc SINE Alu -19 290 125 2074 114 3 3 chr5 97957995 97958292 -105127240 - AluSx SINE Alu -15 297 1 193 239 70 99 chr5 97960394 97960465 -105125067 - MIR SINE MIR -38 224 156 2397 76 0 0 chr5 97960795 97961096 -105124436 + AluSg SINE Alu 1 301 -9 29 78 0 0 chr5 97961112 97961176 -105124356 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr5 97961318 97961339 -105124193 + AT_rich Low_complexity Low_complexity 1 21 0 1973 64 4 4 chr5 97961859 97962126 -105123406 - L1PA4 LINE L1 0 6155 5889 564 289 149 0 chr5 97962179 97962380 -105123152 - MIR SINE MIR -25 237 7 393 149 0 0 chr5 97962602 97962669 -105122863 + (CA)n Simple_repeat Simple_repeat 2 68 0 2414 127 38 71 chr5 97962699 97962962 -105122570 + Tigger2a DNA MER2_type 1 244 -2464 1649 96 0 0 chr5 97962962 97963180 -105122352 + AluSc SINE Alu 86 303 -6 2414 127 38 71 chr5 97963180 97963365 -105122167 + Tigger2a DNA MER2_type 244 434 0 26 0 0 0 chr5 97963657 97963683 -105121849 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 97964437 97964463 -105121069 + AT_rich Low_complexity Low_complexity 1 26 0 1382 137 20 131 chr5 97964514 97964857 -105120675 + AluYb8 SINE Alu 2 306 -2 1431 226 7 0 chr5 97964866 97965145 -105120387 + AluJo SINE Alu 1 281 -31 199 330 85 42 chr5 97966544 97966662 -105118870 - L2 LINE L2 -4 3268 3146 21 71 0 0 chr5 97967182 97967224 -105118308 + AT_rich Low_complexity Low_complexity 1 42 0 2191 118 56 8 chr5 97967444 97967800 -105117732 + THE1C LTR MaLR 1 373 -2 10103 110 13 49 chr5 97967802 97969442 -105116090 + THE1C-int LTR MaLR 1 1580 0 2012 140 62 8 chr5 97969442 97969798 -105115734 + THE1C LTR MaLR 1 375 0 617 296 6 12 chr5 97973141 97973313 -105112219 + MER5B DNA MER1_type 1 171 -7 180 77 0 0 chr5 97974227 97974253 -105111279 + (CA)n Simple_repeat Simple_repeat 1 26 0 1555 145 24 98 chr5 97975434 97975737 -105109795 - L1MA7 LINE L1 -171 6120 5796 2054 124 0 25 chr5 97975737 97976052 -105109480 - AluSx SINE Alu -5 307 1 1555 145 24 98 chr5 97976052 97976111 -105109421 - L1MA7 LINE L1 -495 5796 5785 830 150 7 0 chr5 97976111 97976264 -105109268 + L1MA6 LINE L1 6147 6300 0 1555 145 24 98 chr5 97976264 97976279 -105109253 - L1MA7 LINE L1 -506 5785 5770 348 325 60 0 chr5 97976288 97976405 -105109127 + MER5B DNA MER1_type 2 125 -53 297 205 26 0 chr5 97976412 97976529 -105109003 + (TA)n Simple_repeat Simple_repeat 1 120 0 1146 212 17 55 chr5 97976529 97976690 -105108842 - AluJo SINE Alu -16 286 139 1998 102 31 14 chr5 97976690 97976984 -105108548 - AluSx SINE Alu -13 299 1 1146 212 17 55 chr5 97976984 97977115 -105108417 - AluJo SINE Alu -163 139 5 2462 61 0 3 chr5 97977808 97978118 -105107414 - AluY SINE Alu -2 309 1 778 220 68 55 chr5 97979273 97979509 -105106023 + MIR SINE MIR 20 258 -4 534 70 0 0 chr5 97981174 97981245 -105104287 + (TA)n Simple_repeat Simple_repeat 2 72 0 21 0 0 0 chr5 97982144 97982165 -105103367 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 97983267 97983291 -105102241 + (TTA)n Simple_repeat Simple_repeat 1 24 0 267 174 0 0 chr5 97983911 97983957 -105101575 - L2 LINE L2 0 3313 3268 23 0 0 0 chr5 97984284 97984307 -105101225 + AT_rich Low_complexity Low_complexity 1 23 0 428 289 91 12 chr5 97984539 97984781 -105100751 - MIR SINE MIR -1 261 1 198 71 0 0 chr5 97984962 97984990 -105100542 + (CA)n Simple_repeat Simple_repeat 2 29 0 270 0 0 0 chr5 97985622 97985652 -105099880 + (T)n Simple_repeat Simple_repeat 1 30 0 22 70 0 0 chr5 97986746 97986789 -105098743 + AT_rich Low_complexity Low_complexity 1 43 0 201 74 0 0 chr5 97987977 97988004 -105097528 + (T)n Simple_repeat Simple_repeat 1 27 0 32 0 0 0 chr5 97991299 97991331 -105094201 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 97994062 97994083 -105091449 + AT_rich Low_complexity Low_complexity 1 21 0 224 260 14 0 chr5 97995142 97995215 -105090317 + (CG)n Simple_repeat Simple_repeat 2 75 0 425 65 0 16 chr5 97995226 97995288 -105090244 + (GGA)n Simple_repeat Simple_repeat 1 61 0 191 276 26 40 chr5 97997635 97997711 -105087821 - L2 LINE L2 -2577 737 663 28 61 0 0 chr5 97997841 97997890 -105087642 + AT_rich Low_complexity Low_complexity 1 49 0 186 103 0 0 chr5 97998228 97998257 -105087275 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 302 280 102 8 chr5 97998322 97998440 -105087092 + MIR SINE MIR 17 145 -63 901 164 6 18 chr5 98002393 98002558 -105082974 - MER3 DNA MER1_type -46 163 1 186 43 0 0 chr5 98002585 98002608 -105082924 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 312 303 0 30 chr5 98002711 98002810 -105082722 - MIR3 SINE MIR -26 182 87 2377 60 0 41 chr5 98003320 98003636 -105081896 - AluY SINE Alu -8 303 1 197 100 50 0 chr5 98003736 98003776 -105081756 + T-rich Low_complexity Low_complexity 2 43 0 37 23 0 0 chr5 98003917 98003961 -105081571 + AT_rich Low_complexity Low_complexity 1 44 0 463 256 31 38 chr5 98004190 98004350 -105081182 + MIR SINE MIR 63 221 -41 618 108 29 0 chr5 98005228 98005330 -105080202 - AluSx SINE Alu 0 310 206 839 136 0 0 chr5 98005331 98005449 -105080083 - AluSx SINE Alu -195 118 1 31 0 0 0 chr5 98005499 98005530 -105080002 + AT_rich Low_complexity Low_complexity 1 31 0 614 316 28 8 chr5 98005997 98006250 -105079282 - MIR SINE MIR -3 259 2 565 294 123 4 chr5 98006317 98006545 -105078987 - MARNA DNA Mariner -51 535 281 304 282 38 46 chr5 98006885 98007016 -105078516 + MIR SINE MIR 132 261 -1 240 154 0 0 chr5 98008747 98008799 -105076733 + CT-rich Low_complexity Low_complexity 2 53 0 222 37 0 0 chr5 98008870 98008897 -105076635 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 250 134 0 chr5 98009820 98009932 -105075600 + MER5A DNA MER1_type 35 161 -28 22 0 0 0 chr5 98010965 98010987 -105074545 + AT_rich Low_complexity Low_complexity 1 22 0 277 382 0 10 chr5 98011407 98011509 -105074023 - MIR SINE MIR -87 121 21 21 0 0 0 chr5 98013356 98013377 -105072155 + AT_rich Low_complexity Low_complexity 1 21 0 24 91 0 0 chr5 98014259 98014325 -105071207 + AT_rich Low_complexity Low_complexity 1 66 0 29 0 0 0 chr5 98015086 98015115 -105070417 + AT_rich Low_complexity Low_complexity 1 29 0 39 80 0 0 chr5 98015228 98015316 -105070216 + AT_rich Low_complexity Low_complexity 1 88 0 267 190 0 0 chr5 98018904 98018962 -105066570 + (TA)n Simple_repeat Simple_repeat 2 59 0 1029 173 0 6 chr5 98019005 98019184 -105066348 + MER3 DNA MER1_type 1 131 -78 2146 117 7 0 chr5 98019678 98020007 -105065525 + AluSq SINE Alu 1 313 0 23 68 0 0 chr5 98020253 98020297 -105065235 + AT_rich Low_complexity Low_complexity 1 44 0 1722 221 49 34 chr5 98021116 98021709 -105063823 - L1MC5 LINE L1 -45 7916 7315 1526 227 74 71 chr5 98021746 98022360 -105063172 - L1MC5 LINE L1 -722 7239 6610 252 100 0 0 chr5 98022360 98022400 -105063132 + (TG)n Simple_repeat Simple_repeat 2 41 0 1526 227 74 71 chr5 98022400 98022449 -105063083 - L1MC5 LINE L1 -1351 6610 6563 1457 259 124 26 chr5 98022817 98023389 -105062143 - L1MEc LINE L1 -5734 662 35 27 0 0 0 chr5 98023456 98023483 -105062049 + AT_rich Low_complexity Low_complexity 1 27 0 349 250 87 11 chr5 98023661 98023753 -105061779 - L2 LINE L2 0 3272 3174 2538 202 50 45 chr5 98023771 98024445 -105061087 + L1MD2 LINE L1 5669 6346 -13 1574 78 5 23 chr5 98026464 98026682 -105058850 - AluSg/x SINE Alu -12 298 85 1172 187 41 29 chr5 98027954 98028159 -105057373 - MER33 DNA MER1_type -2263 322 110 2190 88 0 32 chr5 98028159 98028467 -105057065 + AluY SINE Alu 1 298 -13 1172 187 41 29 chr5 98028467 98028576 -105056956 - MER33 DNA MER1_type -2475 110 4 342 270 159 16 chr5 98029613 98029739 -105055793 - L2 LINE L2 0 3272 3129 3641 63 0 0 chr5 98032173 98032634 -105052898 - L1PA8 LINE L1 -3 6169 5709 241 316 13 0 chr5 98032805 98032881 -105052651 - L2 LINE L2 -1 3271 3195 366 304 7 14 chr5 98032900 98033038 -105052494 - MLT1L LTR MaLR -2 613 477 2044 56 25 32 chr5 98088685 98088969 -104996563 + AluSg SINE Alu 1 282 -28 2497 84 0 0 chr5 98090457 98090766 -104994766 - AluSc SINE Alu 0 309 1 1298 181 75 18 chr5 98090824 98091105 -104994427 - L1ME2 LINE L1 -2 6162 5866 1376 199 3 64 chr5 98091549 98091846 -104993686 - AluJo SINE Alu -33 279 1 296 304 29 42 chr5 98093365 98093544 -104991988 - MER5A DNA MER1_type 0 189 1 916 295 67 19 chr5 98094020 98094258 -104991274 + LTR16A LTR ERVL 1 259 -191 2548 167 50 15 chr5 98094258 98094714 -104990818 + MER70A LTR ERVL 1 472 0 916 295 67 19 chr5 98094714 98094787 -104990745 + LTR16A LTR ERVL 259 327 -123 29 60 0 0 chr5 98095174 98095224 -104990308 + AT_rich Low_complexity Low_complexity 1 50 0 263 202 0 96 chr5 98095836 98095940 -104989592 + AluSq SINE Alu 94 187 -116 490 296 64 94 chr5 98096645 98097261 -104988271 - L2 LINE L2 -1 3271 2665 1192 107 179 5 chr5 98097261 98097457 -104988075 - MER30 DNA MER1_type 0 230 1 490 296 64 94 chr5 98097457 98097556 -104987976 - L2 LINE L2 -607 2665 2565 23 0 0 0 chr5 98100780 98100803 -104984729 + AT_rich Low_complexity Low_complexity 1 23 0 2617 64 0 0 chr5 98100994 98101305 -104984227 + AluY SINE Alu 1 311 0 351 215 51 63 chr5 98101453 98101611 -104983921 + MER103 DNA DNA 11 166 0 242 152 65 0 chr5 98101650 98101696 -104983836 + L2 LINE L2 3223 3271 -1 2164 98 0 0 chr5 98101881 98102155 -104983377 - AluSg SINE Alu -10 300 27 29 0 0 0 chr5 98102155 98102184 -104983348 + AT_rich Low_complexity Low_complexity 1 29 0 214 326 0 22 chr5 98103580 98103669 -104981863 + GA-rich Low_complexity Low_complexity 5 91 0 21 36 0 0 chr5 98104185 98104213 -104981319 + AT_rich Low_complexity Low_complexity 1 28 0 215 231 0 0 chr5 98105145 98105197 -104980335 + T-rich Low_complexity Low_complexity 2 53 0 213 205 0 0 chr5 98106441 98106480 -104979052 + (CA)n Simple_repeat Simple_repeat 1 39 0 285 29 0 0 chr5 98111805 98111839 -104973693 + (CTG)n Simple_repeat Simple_repeat 3 36 0 249 280 0 0 chr5 98112240 98112315 -104973217 + (TA)n Simple_repeat Simple_repeat 2 76 0 228 254 30 0 chr5 98112332 98112399 -104973133 + L1MC4 LINE L1 6638 6706 -1336 * 239 286 0 31 chr5 98112340 98112438 -104973094 - L1MC4 LINE L1 -1330 6712 6618 21 36 0 0 chr5 98112645 98112673 -104972859 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr5 98112969 98112990 -104972542 + (A)n Simple_repeat Simple_repeat 1 21 0 215 336 103 0 chr5 98115313 98115420 -104970112 - MIR SINE MIR -58 204 87 269 207 134 0 chr5 98115658 98115740 -104969792 - MIR SINE MIR -123 139 47 205 364 98 0 chr5 98116646 98116778 -104968754 + MIR3 SINE MIR 7 151 -57 338 236 245 0 chr5 98116859 98116965 -104968567 + LTR16C LTR ERVL 355 486 -5 1682 167 38 115 chr5 98117003 98117424 -104968108 + MLT1C LTR MaLR 3 380 -87 1555 136 35 49 chr5 98117424 98117711 -104967821 - AluJb SINE Alu -14 298 16 1682 167 38 115 chr5 98117711 98117793 -104967739 + MLT1C LTR MaLR 380 467 0 841 191 27 37 chr5 98118021 98118209 -104967323 - MER5A DNA MER1_type 0 189 4 1239 223 4 0 chr5 98118474 98118748 -104966784 - L1PB4 LINE L1 -1 6155 5881 509 155 0 0 chr5 98118751 98118835 -104966697 - AluJ/FLAM SINE Alu -228 84 1 382 280 13 60 chr5 98119014 98119164 -104966368 - MIR SINE MIR -6 256 114 366 308 8 23 chr5 98119277 98119410 -104966122 - MER94 DNA DNA -2 132 2 497 365 51 38 chr5 98119441 98119811 -104965721 + L2 LINE L2 2895 3269 -3 376 303 152 5 chr5 98120137 98120335 -104965197 + MIR SINE MIR 36 262 0 232 152 0 22 chr5 98120612 98120658 -104964874 - LTR16A1 LTR ERVL 0 457 413 41 66 0 0 chr5 98121680 98121756 -104963776 + AT_rich Low_complexity Low_complexity 1 76 0 790 295 90 16 chr5 98121810 98122176 -104963356 - MLT1I LTR MaLR -16 393 1 27 62 0 0 chr5 98122247 98122295 -104963237 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr5 98122602 98122625 -104962907 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 98122683 98122712 -104962820 + AT_rich Low_complexity Low_complexity 1 29 0 317 328 115 35 chr5 98122940 98123114 -104962418 + MIR SINE MIR 37 224 -38 352 254 58 43 chr5 98123327 98123465 -104962067 - MER112 DNA MER1_type -1 259 120 37 0 0 0 chr5 98123519 98123556 -104961976 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr5 98123653 98123677 -104961855 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 98126845 98126868 -104958664 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 747 129 0 0 chr5 98126949 98127065 -104958467 + L1MA4 LINE L1 6179 6294 -6 662 0 54 0 chr5 98127165 98127258 -104958274 + (TAGA)n Simple_repeat Simple_repeat 3 100 0 268 303 10 71 chr5 98127834 98127933 -104957599 + MIR SINE MIR 43 135 -73 277 103 0 0 chr5 98128007 98128046 -104957486 - MLT2F LTR ERVL 0 663 625 36 23 0 0 chr5 98128062 98128105 -104957427 + AT_rich Low_complexity Low_complexity 1 43 0 275 192 13 0 chr5 98128248 98128326 -104957206 + (TA)n Simple_repeat Simple_repeat 2 80 0 395 206 0 0 chr5 98128422 98128495 -104957037 - MLT2F LTR ERVL -587 76 4 186 43 0 0 chr5 98130065 98130088 -104955444 + (CTTG)n Simple_repeat Simple_repeat 2 24 0 278 365 74 46 chr5 98130202 98130682 -104954850 - L2 LINE L2 -79 3193 2708 250 165 177 51 chr5 98132665 98132744 -104952788 - L2 LINE L2 0 3272 3184 294 203 8 119 chr5 98133255 98133373 -104952159 + MIR3 SINE MIR 91 195 -13 355 282 51 99 chr5 98133681 98133954 -104951578 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 98133979 98134000 -104951532 + AT_rich Low_complexity Low_complexity 1 21 0 519 120 65 0 chr5 98134764 98134856 -104950676 + MER113 DNA MER1_type? 296 393 -128 1717 121 0 0 chr5 98134862 98135154 -104950378 - AluSx SINE Alu 0 335 44 228 125 0 0 chr5 98136471 98136503 -104949029 + (GGAAA)n Simple_repeat Simple_repeat 2 33 0 324 229 0 0 chr5 98136510 98136593 -104948939 + GA-rich Low_complexity Low_complexity 2 84 0 306 132 0 0 chr5 98136584 98136637 -104948895 + (GAA)n Simple_repeat Simple_repeat 3 55 0 * 1034 63 0 53 chr5 98136642 98136831 -104948701 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 200 167 0 83 chr5 98136831 98136856 -104948676 + polypurine Low_complexity Low_complexity 1 22 -22 1628 182 0 20 chr5 98136856 98137152 -104948380 + AluJo SINE Alu 3 292 -20 200 167 0 83 chr5 98137152 98137174 -104948358 + polypurine Low_complexity Low_complexity 22 44 0 584 295 17 55 chr5 98137361 98137522 -104948010 - MIR SINE MIR -26 236 85 1523 168 177 0 chr5 98137522 98137832 -104947700 - MLT1A1 LTR MaLR 0 365 1 584 295 17 55 chr5 98137832 98137907 -104947625 - MIR SINE MIR -177 85 9 2003 165 28 6 chr5 98138120 98138477 -104947055 - MLT1A1 LTR MaLR 0 365 1 30 45 0 0 chr5 98139155 98139199 -104946333 + AT_rich Low_complexity Low_complexity 1 44 0 230 231 0 19 chr5 98140728 98140780 -104944752 + MLT1K LTR MaLR 462 512 -76 21 0 0 0 chr5 98141519 98141540 -104943992 + AT_rich Low_complexity Low_complexity 1 21 0 342 280 39 33 chr5 98142191 98142495 -104943037 + L1P4 LINE L1 5275 5596 -680 233 257 29 0 chr5 98142498 98142568 -104942964 + L1ME LINE L1 5630 5701 -420 484 220 27 85 chr5 98143192 98143415 -104942117 + L1MC5 LINE L1 7701 7910 -51 460 268 82 37 chr5 98143729 98143972 -104941560 + L1ME LINE L1 5508 5761 -360 261 285 311 11 chr5 98144042 98144309 -104941223 - L2 LINE L2 -9 3304 2958 2393 80 3 10 chr5 98144493 98144806 -104940726 - AluY SINE Alu 0 311 1 2132 87 3 21 chr5 98145303 98145614 -104939918 + AluSx SINE Alu 1 306 0 314 311 48 19 chr5 98145687 98145790 -104939742 - L2 LINE L2 -18 3295 3190 2251 118 0 3 chr5 98145838 98146151 -104939381 - AluSx SINE Alu 0 312 1 434 179 26 0 chr5 98146167 98146245 -104939287 - L2 LINE L2 -4 3309 3230 1632 186 3 28 chr5 98146306 98146619 -104938913 + AluJb SINE Alu 1 306 0 213 94 0 0 chr5 98148327 98148359 -104937173 + (TG)n Simple_repeat Simple_repeat 2 33 0 726 256 19 47 chr5 98148532 98148743 -104936789 + MER63A DNA MER1_type 2 206 -4 293 207 0 0 chr5 98149706 98149764 -104935768 - MLT1G LTR MaLR -2 588 531 402 239 128 0 chr5 98149886 98150003 -104935529 - FLAM_C SINE Alu -1 132 1 474 326 19 13 chr5 98150032 98150215 -104935317 - MLT1H1 LTR MaLR -286 304 113 431 19 0 0 chr5 98150222 98150274 -104935258 + MADE1 DNA Mariner 29 80 0 1605 184 3 16 chr5 98150345 98150649 -104934883 - AluJo SINE Alu -2 310 11 426 224 8 37 chr5 98150674 98150695 -104934837 - L1MA10 LINE L1 -38 6296 6276 2796 220 71 10 chr5 98150695 98151580 -104933952 - L1ME1 LINE L1 -45 6190 5250 3638 184 68 63 chr5 98151591 98152563 -104932969 - L1MD2 LINE L1 -12 6230 5254 4397 259 98 19 chr5 98152574 98154266 -104931266 - L1ME1 LINE L1 -4533 1863 40 2551 85 31 0 chr5 98154319 98154671 -104930861 + L1PA7 LINE L1 5792 6154 0 229 222 49 25 chr5 98154775 98154856 -104930676 - MIR SINE MIR -49 213 131 348 287 23 11 chr5 98154857 98154944 -104930588 + L2 LINE L2 3190 3277 -36 325 344 47 0 chr5 98154967 98155095 -104930437 - MIR SINE MIR -128 134 1 4083 174 57 38 chr5 98155142 98155958 -104929574 + L1MB2 LINE L1 4899 5743 -428 2388 123 33 6 chr5 98155958 98156323 -104929209 - THE1C LTR MaLR 0 375 1 4083 174 57 38 chr5 98156323 98156761 -104928771 + L1MB2 LINE L1 5743 6171 0 2133 123 3 3 chr5 98157476 98157777 -104927755 - AluSx SINE Alu -11 301 1 264 332 36 77 chr5 98157884 98158080 -104927452 + MIR3 SINE MIR 21 208 0 486 250 50 7 chr5 98158154 98158294 -104927238 - MLT1L LTR MaLR -4 611 466 649 248 107 41 chr5 98158338 98158657 -104926875 - MLT1L LTR MaLR -239 376 37 541 217 17 17 chr5 98160948 98161063 -104924469 + MER94 DNA DNA 20 134 0 22 20 8 0 chr5 98163550 98163620 -104921912 + AT_rich Low_complexity Low_complexity 1 29 0 330 67 0 0 chr5 98164094 98164139 -104921393 + (CA)n Simple_repeat Simple_repeat 2 46 0 348 328 51 23 chr5 98164774 98164951 -104920581 + MIR SINE MIR 51 232 -30 245 292 18 35 chr5 98167797 98167910 -104917622 + GA-rich Low_complexity Low_complexity 5 115 0 23 0 0 0 chr5 98168655 98168678 -104916854 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 98170052 98170073 -104915459 + AT_rich Low_complexity Low_complexity 1 21 0 203 255 39 0 chr5 98170091 98170142 -104915390 - L2 LINE L2 -4 3309 3257 22 111 0 0 chr5 98171350 98171449 -104914083 + AT_rich Low_complexity Low_complexity 1 99 0 237 274 0 66 chr5 98178774 98178880 -104906652 + CT-rich Low_complexity Low_complexity 3 101 0 189 0 0 0 chr5 98181263 98181284 -104904248 + (A)n Simple_repeat Simple_repeat 1 21 0 316 344 25 43 chr5 98181836 98181999 -104903533 + MIR SINE MIR 59 218 -44 182 375 12 0 chr5 98182615 98182695 -104902837 + MIR3 SINE MIR 100 180 -28 655 291 40 89 chr5 98183031 98183139 -104902393 + MLT1I LTR MaLR 63 175 -234 2198 104 0 3 chr5 98183139 98183437 -104902095 + AluSg1 SINE Alu 1 297 -12 655 291 40 89 chr5 98183437 98183676 -104901856 + MLT1I LTR MaLR 175 393 -16 1156 222 9 0 chr5 98183676 98183892 -104901640 + Charlie1b DNA MER1_type 1 218 -305 1696 193 36 25 chr5 98183899 98184261 -104901271 + MLT1A2 LTR MaLR 9 374 0 852 197 66 38 chr5 98184261 98184541 -104900991 + Charlie1b DNA MER1_type 233 520 -3 210 299 31 79 chr5 98185151 98185278 -104900254 + L2 LINE L2 3134 3254 -18 352 337 104 20 chr5 98185782 98185984 -104899548 - MIR SINE MIR -38 224 6 849 96 0 0 chr5 98186497 98186612 -104898920 - L1PA7 LINE L1 -4 6150 6036 212 304 0 0 chr5 98187383 98187429 -104898103 + L2 LINE L2 3182 3227 -86 278 271 118 0 chr5 98187728 98187813 -104897719 + MIR SINE MIR 1 95 -167 21 57 0 0 chr5 98187891 98187926 -104897606 + AT_rich Low_complexity Low_complexity 1 35 0 2136 113 3 3 chr5 98188651 98188944 -104896588 - AluSx SINE Alu -19 293 1 223 327 18 26 chr5 98189324 98189437 -104896095 + MER5A DNA MER1_type 9 120 -69 357 306 43 8 chr5 98189551 98189730 -104895802 + MIR SINE MIR 2 237 -25 281 189 19 0 chr5 98189736 98189789 -104895743 + MER5A DNA MER1_type 136 189 0 243 289 21 84 chr5 98190353 98190463 -104895069 + L2 LINE L2 2328 2423 -891 6721 45 4 0 chr5 98190463 98191289 -104894243 + L1PA5 LINE L1 5324 6152 -2 243 289 21 84 chr5 98191289 98191368 -104894164 + L2 LINE L2 2423 2505 -809 351 304 30 42 chr5 98191770 98191949 -104893583 - MER5A DNA MER1_type 0 189 1 1495 262 47 27 chr5 98192425 98192663 -104892869 + LTR16A LTR ERVL 1 252 -198 2503 162 50 15 chr5 98192663 98193119 -104892413 + MER70A LTR ERVL 1 472 0 1495 262 47 27 chr5 98193119 98193281 -104892251 + LTR16A LTR ERVL 252 409 -41 296 300 105 29 chr5 98193311 98193855 -104891677 + HAL1 LINE L1 961 1545 -962 1499 201 74 39 chr5 98193855 98194218 -104891314 - MLT1D LTR MaLR -129 376 1 208 328 67 97 chr5 98194553 98195028 -104890504 + L2 LINE L2 2812 3272 0 270 0 0 0 chr5 98195135 98195165 -104890367 + (CA)n Simple_repeat Simple_repeat 2 31 0 536 296 0 31 chr5 98195579 98195738 -104889794 + MER5B DNA MER1_type 24 177 -1 248 190 52 35 chr5 98198851 98198909 -104886623 - MIR3 SINE MIR -25 183 125 399 287 28 0 chr5 98199214 98199322 -104886210 + L2 LINE L2 3199 3309 -4 1424 219 141 18 chr5 98199624 98200072 -104885460 - MLT1D LTR MaLR -2 503 1 372 365 57 47 chr5 98200210 98200508 -104885024 + L2 LINE L2 2885 3189 -83 305 23 0 23 chr5 98200508 98200551 -104884981 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 372 365 57 47 chr5 98200551 98200636 -104884896 + L2 LINE L2 3189 3272 0 22 0 0 0 chr5 98201832 98201854 -104883678 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr5 98202580 98202618 -104882914 + (TG)n Simple_repeat Simple_repeat 2 39 0 1852 131 44 7 chr5 98203018 98203333 -104882199 + AluSx SINE Alu 1 325 0 929 227 45 33 chr5 98203478 98203720 -104881812 + MIR SINE MIR 2 246 -16 875 205 62 66 chr5 98203913 98204157 -104881375 + MIR SINE MIR 11 253 -9 204 309 255 23 chr5 98205297 98205646 -104879886 + L2 LINE L2 2071 2500 -814 352 232 179 105 chr5 98205719 98206101 -104879431 + MLT1H1 LTR MaLR 138 553 -2 197 211 18 0 chr5 98206324 98206381 -104879151 + GA-rich Low_complexity Low_complexity 3 60 0 504 264 88 6 chr5 98207689 98207848 -104877684 + MIR SINE MIR 16 187 -75 892 251 0 0 chr5 98207885 98208064 -104877468 + MER5A DNA MER1_type 1 179 -10 397 285 82 48 chr5 98208048 98208255 -104877277 + MIR SINE MIR 49 262 0 * 317 294 0 0 chr5 98208262 98208330 -104877202 - L2 LINE L2 -42 3230 3163 21424 173 14 39 chr5 98208375 98215017 -104870515 + L1PA11 LINE L1 13 6489 0 860 288 115 26 chr5 98215034 98215683 -104869849 - L2 LINE L2 -136 3177 2461 278 227 120 27 chr5 98215783 98215858 -104869674 + MIR SINE MIR 51 132 -76 437 82 0 14 chr5 98215982 98216055 -104869477 + L1P LINE L1 4678 4749 -1397 376 327 124 41 chr5 98216493 98216759 -104868773 + L2 LINE L2 2551 2838 -476 595 234 8 0 chr5 98216778 98216906 -104868626 - L2 LINE L2 -372 2942 2814 234 288 0 0 chr5 98217180 98217239 -104868293 - L2 LINE L2 0 3272 3214 191 349 0 0 chr5 98218705 98218768 -104866764 - MIR3 SINE MIR -35 173 111 301 313 134 9 chr5 98219415 98219527 -104866005 - L2 LINE L2 -1 3271 3146 243 0 0 0 chr5 98219987 98220014 -104865518 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr5 98220344 98220366 -104865166 + AT_rich Low_complexity Low_complexity 1 22 0 438 86 0 0 chr5 98222099 98222157 -104863375 - Charlie3 DNA MER1_type 0 2710 2653 2423 74 3 3 chr5 98222554 98222865 -104862667 - AluY SINE Alu 0 311 1 243 193 0 18 chr5 98223059 98223116 -104862416 + L1MDa LINE L1 1871 1926 -4614 339 98 0 0 chr5 98223240 98223291 -104862241 + MADE1 DNA Mariner 2 52 -28 1360 258 27 48 chr5 98223355 98223793 -104861739 + L2 LINE L2 2350 2778 -536 1071 99 0 0 chr5 98223793 98223934 -104861598 + AluSp/q SINE Alu 172 312 -1 1156 230 135 60 chr5 98223934 98224447 -104861085 + L2 LINE L2 2769 3313 0 21 0 0 0 chr5 98225631 98225652 -104859880 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr5 98225875 98225900 -104859632 + (A)n Simple_repeat Simple_repeat 1 25 0 425 302 49 49 chr5 98226068 98226273 -104859259 + MIR3 SINE MIR 4 208 0 219 200 0 33 chr5 98226710 98226770 -104858762 + T-rich Low_complexity Low_complexity 4 61 0 2485 56 0 0 chr5 98227123 98227427 -104858105 + AluY SINE Alu 1 304 -7 453 313 37 18 chr5 98227502 98227719 -104857813 + LTR16A LTR ERVL 59 279 -171 281 238 59 10 chr5 98227718 98227819 -104857713 + LTR16A LTR ERVL 369 491 0 * 309 325 48 32 chr5 98227889 98228077 -104857455 + MER117 DNA MER1_type 7 197 0 486 234 16 16 chr5 98228439 98228563 -104856969 + MLT1K LTR MaLR 462 585 -3 578 327 109 9 chr5 98229061 98229281 -104856251 - MIR SINE MIR 0 262 21 1904 176 40 6 chr5 98230226 98230579 -104854953 + MLT1A1 LTR MaLR 1 365 0 1655 164 167 14 chr5 98230835 98231019 -104854513 + MSTA LTR MaLR 1 155 -273 198 0 0 0 chr5 98231019 98231041 -104854491 + (TC)n Simple_repeat Simple_repeat 1 22 0 1655 164 167 14 chr5 98231041 98231227 -104854305 + MSTA LTR MaLR 155 428 0 190 311 0 0 chr5 98231443 98231488 -104854044 - L2 LINE L2 -38 3234 3190 1209 162 46 11 chr5 98231491 98231775 -104853757 - MER33 DNA MER1_type -14 310 17 1738 184 58 66 chr5 98231857 98232389 -104853143 - L1MC5 LINE L1 -737 7224 6697 183 80 0 0 chr5 98232399 98232424 -104853108 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1972 138 43 0 chr5 98232424 98232706 -104852826 - AluSg SINE Alu -16 294 1 282 331 30 35 chr5 98232731 98232900 -104852632 - L2 LINE L2 -1203 2111 1944 1206 276 186 23 chr5 98232903 98233479 -104852053 + L2 LINE L2 2116 2785 -529 695 236 82 64 chr5 98233496 98233738 -104851794 + L1MDa LINE L1 34 287 -6253 312 91 0 0 chr5 98233738 98233782 -104851750 + (CA)n Simple_repeat Simple_repeat 1 44 0 695 236 82 64 chr5 98233782 98233916 -104851616 + L1MDa LINE L1 287 417 -6123 3290 212 60 13 chr5 98234163 98235255 -104850277 + L1MDa LINE L1 908 2025 -4515 629 305 48 4 chr5 98235317 98235566 -104849966 + MLT1L LTR MaLR 339 598 -17 325 230 209 88 chr5 98235600 98235656 -104849876 + L1ME4a LINE L1 5635 5683 -438 2290 108 0 0 chr5 98235656 98235963 -104849569 + AluSx SINE Alu 1 307 -5 325 230 209 88 chr5 98235963 98236145 -104849387 + L1ME4a LINE L1 5683 5902 -219 225 277 102 7 chr5 98236155 98236292 -104849240 + L1ME4a LINE L1 5969 6118 -3 459 0 0 0 chr5 98236459 98236510 -104849022 + (TG)n Simple_repeat Simple_repeat 2 52 0 4439 166 100 91 chr5 98236727 98237417 -104848115 + L1MC3 LINE L1 5838 6520 -1265 7072 50 52 21 chr5 98237417 98239016 -104846516 + SVA Other Other 1 1372 -14 4439 166 100 91 chr5 98239016 98239378 -104846154 + L1MC3 LINE L1 6520 6910 -875 339 25 0 0 chr5 98239378 98239418 -104846114 + (CA)n Simple_repeat Simple_repeat 2 41 0 4439 166 100 91 chr5 98239418 98239653 -104845879 + L1MC3 LINE L1 6910 7141 -644 * 36200 88 5 6 chr5 98239650 98245798 -104839734 - L1PA6 LINE L1 -4 6150 13 3325 181 12 1 chr5 98245808 98246461 -104839071 + L1MC3 LINE L1 7125 7784 -1 235 313 170 27 chr5 98246604 98246716 -104838816 + MIR3 SINE MIR 66 193 -15 211 359 23 23 chr5 98246727 98246855 -104838677 + MIR3 SINE MIR 58 185 -23 414 272 8 32 chr5 98246956 98247081 -104838451 + L2 LINE L2 3192 3313 0 450 298 23 47 chr5 98247644 98247815 -104837717 + MER5A DNA MER1_type 1 167 -22 25 0 0 0 chr5 98247975 98248000 -104837532 + AT_rich Low_complexity Low_complexity 1 25 0 1962 130 25 0 chr5 98248312 98248589 -104836943 - AluSx SINE Alu -17 295 12 1587 184 3 44 chr5 98248723 98249038 -104836494 - AluJo SINE Alu -10 302 1 352 314 95 9 chr5 98249688 98249793 -104835739 + L2 LINE L2 3149 3262 -10 2642 178 16 12 chr5 98250038 98250100 -104835432 - MLT2B1 LTR ERVL -5 515 455 2076 94 0 7 chr5 98250100 98250386 -104835146 + AluY SINE Alu 1 284 -27 540 0 0 0 chr5 98250386 98250446 -104835086 + (TA)n Simple_repeat Simple_repeat 2 61 0 2642 178 16 12 chr5 98250446 98250888 -104834644 - MLT2B1 LTR ERVL -64 456 8 2344 91 0 19 chr5 98250965 98251273 -104834259 + AluSg SINE Alu 2 303 -7 459 328 46 13 chr5 98251862 98252100 -104833432 + L1MC/D LINE L1 5526 5771 -2037 448 244 0 0 chr5 98252150 98252269 -104833263 - L1PB4 LINE L1 -1 6155 6037 2194 87 31 0 chr5 98252686 98252972 -104832560 - AluSq SINE Alu -18 295 1 207 228 140 0 chr5 98253539 98253596 -104831936 + L2 LINE L2 3186 3250 -22 686 299 54 96 chr5 98253801 98254282 -104831250 + L2 LINE L2 2834 3294 -19 263 261 0 14 chr5 98254447 98254516 -104831016 + MIR SINE MIR 120 187 -75 1925 163 3 0 chr5 98254616 98254905 -104830627 + AluJb SINE Alu 1 290 -22 1518 220 0 23 chr5 98255013 98255322 -104830210 + AluJo SINE Alu 1 302 -10 279 0 0 0 chr5 98256605 98256636 -104828896 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 502 104 0 0 chr5 98257386 98257453 -104828079 + AluS SINE Alu 3 69 -244 220 324 0 14 chr5 98258312 98258386 -104827146 + MIR SINE MIR 151 223 -39 23 33 0 0 chr5 98259249 98259279 -104826253 + AT_rich Low_complexity Low_complexity 1 30 0 1913 129 15 0 chr5 98259740 98260012 -104825520 + AluSq SINE Alu 1 276 -37 2890 194 31 84 chr5 98260020 98260626 -104824906 + L1ME1 LINE L1 4904 5420 -746 1905 169 0 3 chr5 98260626 98260921 -104824611 + AluSx SINE Alu 1 294 -18 2890 194 31 84 chr5 98260921 98261541 -104823991 + L1ME1 LINE L1 5420 6071 -95 916 267 62 23 chr5 98261558 98261865 -104823667 + ERVL LTR ERVL 5094 5412 -352 1818 272 65 22 chr5 98261890 98262492 -104823040 - ERVL LTR ERVL -755 5009 4382 1072 278 61 16 chr5 98262560 98262873 -104822659 - ERVL LTR ERVL -1489 4275 3949 2455 167 0 0 chr5 98262946 98263329 -104822203 + MLT1B LTR MaLR 3 385 -5 1217 317 33 40 chr5 98263439 98264155 -104821377 - ERVL LTR ERVL -4150 1614 820 388 343 48 45 chr5 98264210 98264478 -104821054 - ERVL LTR ERVL -5050 612 336 184 243 136 129 chr5 98266034 98266174 -104819358 + MER5B DNA MER1_type 1 141 -37 21 36 0 0 chr5 98266216 98266244 -104819288 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 98266384 98266420 -104819112 + AT_rich Low_complexity Low_complexity 1 36 0 323 185 15 15 chr5 98267266 98267331 -104818201 + MIR SINE MIR 157 221 -41 1486 161 16 170 chr5 98267393 98267823 -104817709 + MLT1A1 LTR MaLR 2 365 0 277 274 147 0 chr5 98268846 98268948 -104816584 + MIR SINE MIR 105 221 -41 925 224 22 14 chr5 98270136 98270359 -104815173 - AluJo SINE Alu -7 305 81 869 184 60 60 chr5 98270409 98270626 -104814906 + AluJo SINE Alu 4 220 -92 736 190 0 0 chr5 98271296 98271412 -104814120 - FLAM_A SINE Alu -15 127 12 258 164 0 45 chr5 98271459 98271526 -104814006 + FLAM SINE Alu 70 133 0 2316 89 16 13 chr5 98271563 98271877 -104813655 + L1PB1 LINE L1 5827 6141 -10 1516 127 21 133 chr5 98271877 98272216 -104813316 - AluYb8 SINE Alu -17 301 1 298 287 228 12 chr5 98272512 98272679 -104812853 + L2 LINE L2 3008 3210 -103 611 304 64 91 chr5 98273611 98273710 -104811822 + L2 LINE L2 2565 2665 -607 1271 107 179 5 chr5 98273710 98273906 -104811626 + MER30 DNA MER1_type 1 230 0 611 304 64 91 chr5 98273906 98274520 -104811012 + L2 LINE L2 2665 3271 -1 2195 116 0 0 chr5 98274942 98275252 -104810280 - AluSx SINE Alu 0 312 3 22 56 0 0 chr5 98276427 98276463 -104809069 + AT_rich Low_complexity Low_complexity 1 36 0 495 234 0 28 chr5 98276810 98276917 -104808615 - L2 LINE L2 0 3313 3210 27 0 0 0 chr5 98283002 98283029 -104802503 + AT_rich Low_complexity Low_complexity 1 27 0 28 61 0 0 chr5 98284545 98284594 -104800938 + AT_rich Low_complexity Low_complexity 1 49 0 201 147 0 0 chr5 98289972 98290006 -104795526 + (CAG)n Simple_repeat Simple_repeat 2 35 0 189 0 0 0 chr5 98294829 98294850 -104790682 + (CCA)n Simple_repeat Simple_repeat 3 23 0 23 0 0 0 chr5 98295082 98295105 -104790427 + GC_rich Low_complexity Low_complexity 1 23 0 311 312 0 0 chr5 98295852 98295961 -104789571 + T-rich Low_complexity Low_complexity 1 109 0 297 0 0 0 chr5 98296306 98296339 -104789193 + (TG)n Simple_repeat Simple_repeat 1 33 0 221 83 28 0 chr5 98297521 98297557 -104787975 + (CA)n Simple_repeat Simple_repeat 2 38 0 893 42 8 0 chr5 98298518 98298636 -104786896 + (TCC)n Simple_repeat Simple_repeat 2 120 0 24 0 0 0 chr5 98299217 98299241 -104786291 + AT_rich Low_complexity Low_complexity 1 24 0 283 264 0 0 chr5 98300676 98300748 -104784784 + C-rich Low_complexity Low_complexity 1 72 0 196 146 21 21 chr5 98301010 98301058 -104784474 + GA-rich Low_complexity Low_complexity 1 48 0 423 132 0 0 chr5 98302254 98302322 -104783210 + (T)n Simple_repeat Simple_repeat 1 68 0 202 278 0 15 chr5 98303445 98303578 -104781954 + (TA)n Simple_repeat Simple_repeat 2 132 0 21 0 0 0 chr5 98304441 98304462 -104781070 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 98304563 98304584 -104780948 + AT_rich Low_complexity Low_complexity 1 21 0 293 0 27 0 chr5 98305506 98305543 -104779989 + (TG)n Simple_repeat Simple_repeat 2 39 0 384 77 0 0 chr5 98306178 98306230 -104779302 + (TG)n Simple_repeat Simple_repeat 2 53 0 387 0 0 0 chr5 98306956 98306999 -104778533 + (TC)n Simple_repeat Simple_repeat 2 44 0 202 109 31 47 chr5 98307050 98307114 -104778418 + GA-rich Low_complexity Low_complexity 4 66 0 264 59 0 0 chr5 98307177 98307211 -104778321 + (GGA)n Simple_repeat Simple_repeat 2 35 0 396 0 0 0 chr5 98307745 98307789 -104777743 + (TG)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr5 98308320 98308343 -104777189 + (CA)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr5 98312563 98312584 -104772948 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 258 32 0 0 chr5 98312614 98312645 -104772887 + (CA)n Simple_repeat Simple_repeat 2 32 0 2453 52 16 19 chr5 98317069 98317428 -104768104 + AluSg SINE Alu 1 358 0 410 312 32 69 chr5 98318130 98318348 -104767184 - MIR SINE MIR -4 258 49 300 276 11 11 chr5 98319357 98319444 -104766088 + CT-rich Low_complexity Low_complexity 1 87 0 338 292 231 15 chr5 98320568 98320893 -104764639 + L2 LINE L2 2847 3241 -72 272 231 25 8 chr5 98321860 98321981 -104763551 + CT-rich Low_complexity Low_complexity 4 126 0 694 265 27 11 chr5 98323226 98323411 -104762121 + MIR SINE MIR 53 240 -22 2407 121 55 36 chr5 98323566 98323986 -104761546 + MSTA LTR MaLR 1 428 0 885 148 7 0 chr5 98325073 98325208 -104760324 + FRAM SINE Alu 39 174 -2 2085 97 7 0 chr5 98325636 98325939 -104759593 - AluSx SINE Alu 0 305 1 21 0 0 0 chr5 98325953 98325974 -104759558 + AT_rich Low_complexity Low_complexity 1 21 0 1238 77 16 6 chr5 98326960 98327142 -104758390 + L1PB1 LINE L1 5843 6026 -125 29 90 0 0 chr5 98327144 98327222 -104758310 + AT_rich Low_complexity Low_complexity 1 78 0 1880 155 6 32 chr5 98327227 98327543 -104757989 + AluJo SINE Alu 1 308 -4 1933 153 3 7 chr5 98327716 98328010 -104757522 + AluSx SINE Alu 1 293 -19 379 289 10 0 chr5 98328509 98328606 -104756926 - L2 LINE L2 0 3313 3216 4710 277 49 10 chr5 98328607 98330064 -104755468 - HERVL40 LTR ERVL -1273 4257 2745 664 281 44 13 chr5 98330253 98330481 -104755051 - HERVL40 LTR ERVL -3934 1596 1362 684 246 57 0 chr5 98330869 98331044 -104754488 - HERVL40 LTR ERVL -4411 1119 935 1456 226 41 25 chr5 98331350 98331718 -104753814 - LTR40c LTR ERVL -25 440 67 831 137 4 2 chr5 98331719 98331954 -104753578 + AluSx SINE Alu 1 273 -39 334 209 0 0 chr5 98331976 98332043 -104753489 - LTR40c LTR ERVL -398 67 1 29 60 0 0 chr5 98332087 98332137 -104753395 + AT_rich Low_complexity Low_complexity 1 50 0 229 157 0 39 chr5 98332302 98332353 -104753179 + L1MC4 LINE L1 6654 6702 -1340 290 283 186 7 chr5 98332421 98332566 -104752966 - MIR SINE MIR -77 185 15 24 53 0 0 chr5 98332584 98332622 -104752910 + AT_rich Low_complexity Low_complexity 1 38 0 218 193 35 18 chr5 98333137 98333194 -104752338 + (TATATG)n Simple_repeat Simple_repeat 1 58 0 2478 84 0 0 chr5 98334177 98334486 -104751046 - AluSc SINE Alu 0 309 1 1201 182 75 14 chr5 98334544 98334824 -104750708 - L1ME2 LINE L1 -2 6162 5866 1592 196 4 11 chr5 98335268 98335549 -104749983 - AluJo SINE Alu -33 279 1 2141 96 9 43 chr5 98336514 98336837 -104748695 - AluSx SINE Alu 0 312 1 439 256 35 50 chr5 98336895 98337094 -104748438 - L1MC4a LINE L1 -1858 5950 5755 443 237 7 44 chr5 98339114 98339249 -104746283 - MER45 DNA AcHobo 0 1581 1452 * 573 222 71 101 chr5 98339236 98339434 -104746098 - MER45 DNA AcHobo -1389 192 1 200 360 140 0 chr5 98339609 98339723 -104745809 + L2 LINE L2 3143 3272 0 25 0 0 0 chr5 98342530 98342555 -104742977 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr5 98343824 98343860 -104741672 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr5 98344120 98344145 -104741387 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr5 98344160 98344186 -104741346 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr5 98350653 98350680 -104734852 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 98351874 98351895 -104733637 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 98353710 98353732 -104731800 + AT_rich Low_complexity Low_complexity 1 22 0 300 27 0 0 chr5 98356754 98356791 -104728741 + (T)n Simple_repeat Simple_repeat 1 37 0 2927 6 0 0 chr5 98358405 98358721 -104726811 + AluYb8 SINE Alu 1 316 -2 180 362 0 48 chr5 98359086 98359191 -104726341 + L2 LINE L2 2985 3084 -188 198 308 15 0 chr5 98360527 98360592 -104724940 + MIR SINE MIR 196 261 -1 * 728 244 27 50 chr5 98360578 98360799 -104724733 - MIR SINE MIR -45 217 2 21 36 0 0 chr5 98361364 98361392 -104724140 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr5 98361644 98361686 -104723846 + AT_rich Low_complexity Low_complexity 1 42 0 339 25 0 0 chr5 98362444 98362484 -104723048 + (TG)n Simple_repeat Simple_repeat 1 40 0 319 274 19 28 chr5 98362677 98362783 -104722749 - MIR SINE MIR -109 153 49 344 258 0 32 chr5 98363486 98363579 -104721953 - MIR SINE MIR -4 258 169 35 0 0 0 chr5 98365340 98365375 -104720157 + AT_rich Low_complexity Low_complexity 1 35 0 2088 107 7 3 chr5 98366485 98366776 -104718756 + AluSx SINE Alu 1 292 -20 438 303 83 83 chr5 98367352 98367666 -104717866 - L2 LINE L2 -2 3270 2957 1796 151 0 20 chr5 98367741 98368033 -104717499 + AluJo SINE Alu 1 286 -26 423 253 11 0 chr5 98368080 98368175 -104717357 + MIR SINE MIR 89 184 -78 2460 51 0 0 chr5 98371633 98371927 -104713605 + AluY SINE Alu 1 294 -17 1684 160 23 33 chr5 98372092 98372392 -104713140 - AluJb SINE Alu -15 297 1 238 257 0 27 chr5 98372553 98372627 -104712905 - L1MC5 LINE L1 -48 7913 7842 23 0 0 0 chr5 98374242 98374265 -104711267 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 98375271 98375292 -104710240 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 0 0 chr5 98376300 98376332 -104709200 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 229 204 0 0 chr5 98377045 98377089 -104708443 + MIR SINE MIR 217 260 -2 24 0 0 0 chr5 98377131 98377155 -104708377 + AT_rich Low_complexity Low_complexity 1 24 0 897 232 78 31 chr5 98378563 98379096 -104706436 + L1ME LINE L1 5004 5553 -613 649 295 19 16 chr5 98381497 98381816 -104703716 + L1MD2 LINE L1 4289 4608 -1538 219 36 0 0 chr5 98381826 98381854 -104703678 + (TG)n Simple_repeat Simple_repeat 2 29 0 2919 109 17 0 chr5 98381888 98382614 -104702918 + L1PA8A LINE L1 4942 5675 -456 3320 204 28 47 chr5 98382651 98383706 -104701826 + L1MD2 LINE L1 5079 6116 -243 256 33 0 0 chr5 98383710 98383740 -104701792 - MLT2A1 LTR ERVL -8 436 407 396 59 0 0 chr5 98383740 98383791 -104701741 + (TG)n Simple_repeat Simple_repeat 1 51 0 242 28 0 28 chr5 98383802 98383838 -104701694 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 237 192 41 41 chr5 98383840 98383913 -104701619 - AluSp/q SINE Alu -21 282 210 2759 273 95 29 chr5 98384537 98385136 -104700396 + L1MEc LINE L1 499 1057 -5339 6689 38 12 1 chr5 98385136 98385963 -104699569 + L1PA4 LINE L1 5318 6153 -2 2759 273 95 29 chr5 98385963 98386764 -104698768 + L1MEc LINE L1 1057 2013 -4383 1714 148 3 68 chr5 98386764 98387088 -104698444 - AluSq SINE Alu -10 303 1 2759 273 95 29 chr5 98387088 98387225 -104698307 + L1MEc LINE L1 2013 2139 -4257 654 133 0 9 chr5 98387209 98387322 -104698210 - L1MA7 LINE L1 -141 6150 6039 * 244 210 0 45 chr5 98387467 98387565 -104697967 - L1MB8 LINE L1 -28 6156 6064 23 0 0 0 chr5 98387940 98387963 -104697569 + AT_rich Low_complexity Low_complexity 1 23 0 610 297 59 5 chr5 98388937 98389139 -104696393 + MIR SINE MIR 50 262 0 318 323 50 10 chr5 98391460 98391559 -104693973 - L2 LINE L2 -5 3308 3206 317 208 0 0 chr5 98391740 98391793 -104693739 + MER45 DNA AcHobo 1529 1581 0 575 121 9 95 chr5 98392519 98392635 -104692897 + THE1C LTR MaLR 1 106 -269 1921 118 10 10 chr5 98392706 98393010 -104692522 + THE1C LTR MaLR 72 375 0 22 0 0 0 chr5 98394813 98394835 -104690697 + AT_rich Low_complexity Low_complexity 1 22 0 321 136 358 25 chr5 98394855 98394936 -104690596 + AluJb SINE Alu 195 302 0 1227 181 30 9 chr5 98395103 98395335 -104690197 + L1MB7 LINE L1 5398 5634 -550 823 240 32 0 chr5 98395334 98395555 -104689977 + L1MB7 LINE L1 5879 6106 -78 * 23 0 0 0 chr5 98395855 98395878 -104689654 + AT_rich Low_complexity Low_complexity 1 23 0 221 56 0 28 chr5 98395941 98395977 -104689555 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2023 168 62 74 chr5 98396323 98396558 -104688974 + L1MA9 LINE L1 5789 6025 -287 2149 127 0 3 chr5 98396558 98396872 -104688660 + AluSq SINE Alu 1 313 0 2023 168 62 74 chr5 98396872 98397166 -104688366 + L1MA9 LINE L1 6025 6312 0 2313 83 3 10 chr5 98397440 98397753 -104687779 + AluY SINE Alu 1 311 0 21 57 0 0 chr5 98398002 98398037 -104687495 + AT_rich Low_complexity Low_complexity 1 35 0 348 0 0 0 chr5 98398127 98398169 -104687363 + L1PA6 LINE L1 6109 6150 -4 23 0 0 0 chr5 98398183 98398206 -104687326 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr5 98398247 98398294 -104687238 + AT_rich Low_complexity Low_complexity 1 47 0 209 269 0 0 chr5 98398957 98399009 -104686523 + (CAT)n Simple_repeat Simple_repeat 2 53 0 200 125 25 0 chr5 98399042 98399082 -104686450 + A-rich Low_complexity Low_complexity 3 43 0 991 327 123 20 chr5 98399571 98400252 -104685280 - L1M2b LINE L1 -6332 877 136 550 161 22 79 chr5 98400315 98400458 -104685074 - MSTB2 LTR MaLR -58 380 222 482 321 37 15 chr5 98400854 98401122 -104684410 + L1MC4 LINE L1 6783 7056 -986 988 186 48 90 chr5 98401487 98401777 -104683755 - AluSg SINE Alu -11 299 22 223 96 39 0 chr5 98402219 98402271 -104683261 + (TA)n Simple_repeat Simple_repeat 2 55 0 608 117 43 0 chr5 98403329 98403423 -104682109 - THE1C LTR MaLR 0 375 278 4261 129 53 71 chr5 98403425 98404228 -104681304 - THE1C-int LTR MaLR -789 791 3 2434 101 18 52 chr5 98404230 98404618 -104680914 - THE1C LTR MaLR 0 375 1 266 326 43 0 chr5 98406650 98406742 -104678790 - MIR SINE MIR -14 248 153 5107 60 3 0 chr5 98406771 98407418 -104678114 + L1PA7 LINE L1 5495 6143 -11 278 263 51 25 chr5 98407547 98407665 -104677867 - L1ME4a LINE L1 -13 6108 5988 1061 195 91 0 chr5 98407772 98407943 -104677589 - AluJb SINE Alu 0 313 114 231 36 0 0 chr5 98407943 98407971 -104677561 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1061 195 91 0 chr5 98407971 98408049 -104677483 - AluJb SINE Alu -199 114 44 206 220 0 160 chr5 98408262 98408316 -104677216 + MIR SINE MIR 49 81 -181 552 90 0 0 chr5 98408316 98408394 -104677138 - MADE1 DNA Mariner -2 78 1 206 220 0 160 chr5 98408394 98408439 -104677093 + MIR SINE MIR 81 132 -130 230 330 0 11 chr5 98409649 98409737 -104675795 + (TA)n Simple_repeat Simple_repeat 1 87 0 2515 192 4 17 chr5 98410219 98410741 -104674791 - L1 LINE L1 -885 5261 4747 1996 47 8 0 chr5 98410807 98411060 -104674472 + L1PA4 LINE L1 5895 6149 -6 7099 178 35 3 chr5 98411327 98412827 -104672705 - L1 LINE L1 -1393 4753 3205 1286 195 43 4 chr5 98412827 98413104 -104672428 + L1M2 LINE L1 5512 5799 -513 1729 157 163 0 chr5 98413105 98413465 -104672067 - MSTA LTR MaLR 0 428 6 202 231 15 31 chr5 98413776 98413841 -104671691 + CT-rich Low_complexity Low_complexity 1 64 0 261 290 7 41 chr5 98413914 98414120 -104671412 + CT-rich Low_complexity Low_complexity 1 199 0 200 253 11 23 chr5 98414444 98414531 -104671001 + T-rich Low_complexity Low_complexity 2 87 0 221 83 28 0 chr5 98415650 98415686 -104669846 + (CA)n Simple_repeat Simple_repeat 2 38 0 583 56 11 11 chr5 98416712 98416801 -104668731 + (TCC)n Simple_repeat Simple_repeat 2 90 0 24 0 0 0 chr5 98417383 98417407 -104668125 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 98419569 98419590 -104665942 + AT_rich Low_complexity Low_complexity 1 21 0 748 139 64 17 chr5 98420002 98420174 -104665358 - ORSL DNA AcHobo -27 248 69 2106 117 0 16 chr5 98420885 98421202 -104664330 + AluSx SINE Alu 1 312 0 235 105 26 0 chr5 98421808 98421846 -104663686 + MLT1G LTR MaLR 551 589 -1 425 182 0 0 chr5 98421968 98422045 -104663487 - MLT1D LTR MaLR -175 330 254 1544 84 19 0 chr5 98422181 98422394 -104663138 - L1PA7 LINE L1 -8 6146 5930 759 217 49 27 chr5 98422395 98422579 -104662953 - MLT1D LTR MaLR -317 188 1 4269 185 33 19 chr5 98423142 98423989 -104661543 + MER6 DNA MER2_type 1 859 -6 26 0 0 0 chr5 98424220 98424246 -104661286 + AT_rich Low_complexity Low_complexity 1 26 0 7458 27 7 1 chr5 98427118 98428763 -104656769 + L1PA4 LINE L1 4506 6155 0 22 0 0 0 chr5 98428840 98428862 -104656670 + AT_rich Low_complexity Low_complexity 1 22 0 213 314 63 57 chr5 98429614 98429789 -104655743 - MER5B DNA MER1_type -1 177 2 731 273 21 0 chr5 98430999 98431193 -104654339 + MER63A DNA MER1_type 13 210 0 1279 260 166 20 chr5 98431292 98431778 -104653754 + MLT1E LTR MaLR 13 653 -1 308 252 219 0 chr5 98431778 98431901 -104653631 - MIR SINE MIR -12 250 101 24 0 0 0 chr5 98432605 98432629 -104652903 + AT_rich Low_complexity Low_complexity 1 24 0 358 278 21 7 chr5 98432853 98432997 -104652535 + L1M4 LINE L1 2786 2931 -3215 369 0 0 0 chr5 98433036 98433077 -104652455 + (TG)n Simple_repeat Simple_repeat 2 42 0 766 332 40 32 chr5 98433251 98433627 -104651905 + L2 LINE L2 2376 2754 -560 342 294 159 62 chr5 98433626 98433966 -104651566 + L2 LINE L2 2940 3312 -1 * 242 254 113 21 chr5 98434005 98434147 -104651385 - L1M4 LINE L1 -2642 3504 3350 711 272 65 31 chr5 98434254 98434702 -104650830 - L1M4 LINE L1 -3005 3141 2679 262 283 60 33 chr5 98435127 98435311 -104650221 - L1M4 LINE L1 -1280 4866 4678 1296 334 36 49 chr5 98435313 98436219 -104649313 + L1MCc LINE L1 17 911 -5512 30 59 0 0 chr5 98436495 98436546 -104648986 + AT_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr5 98437601 98437631 -104647901 + AT_rich Low_complexity Low_complexity 1 30 0 293 271 28 28 chr5 98438038 98438145 -104647387 - MLT1H LTR MaLR 0 549 443 1575 103 0 5 chr5 98438268 98438481 -104647051 - AluSx SINE Alu -11 299 88 2933 128 14 26 chr5 98438500 98438994 -104646538 - LTR22B LTR ERVK -3 489 2 435 234 0 0 chr5 98438995 98439089 -104646443 - AluSx SINE Alu -217 95 2 2363 126 11 16 chr5 98440740 98441114 -104644418 + THE1C LTR MaLR 4 375 0 9897 120 15 60 chr5 98441115 98442769 -104642763 + THE1C-int LTR MaLR 2 1580 0 2157 125 50 17 chr5 98442771 98443132 -104642400 + THE1C LTR MaLR 3 375 0 1576 208 22 48 chr5 98443403 98443439 -104642093 + MLT1A1 LTR MaLR 13 48 -317 1848 157 3 10 chr5 98443439 98443745 -104641787 - AluSc SINE Alu -5 304 1 1576 208 22 48 chr5 98443745 98444064 -104641468 + MLT1A1 LTR MaLR 48 359 -6 324 197 0 0 chr5 98444769 98444840 -104640692 - L1MA10 LINE L1 -15 6319 6249 1923 100 27 0 chr5 98444842 98445103 -104640429 - THE1C LTR MaLR -107 268 1 226 304 80 54 chr5 98446079 98446191 -104639341 + L2 LINE L2 3158 3272 0 2631 102 3 0 chr5 98446992 98447346 -104638186 - THE1A LTR MaLR 0 355 1 4913 168 107 12 chr5 98447802 98448733 -104636799 - LTR28 LTR ERV1 0 1020 1 220 269 0 26 chr5 98448878 98448956 -104636576 + GA-rich Low_complexity Low_complexity 2 77 0 235 167 21 0 chr5 98449069 98449117 -104636415 + L1PA15-16 LINE L1 2866 2914 -3935 4692 236 56 17 chr5 98449800 98451351 -104634181 + L1PA13 LINE L1 989 2607 -4190 2679 122 46 0 chr5 98451351 98451728 -104633804 + MLT2A1 LTR ERVL 1 400 -44 318 50 0 0 chr5 98451728 98451768 -104633764 + (CA)n Simple_repeat Simple_repeat 1 40 0 2679 122 46 0 chr5 98451768 98451807 -104633725 + MLT2A1 LTR ERVL 400 436 -8 3959 260 39 9 chr5 98451810 98453073 -104632459 + L1PA13 LINE L1 2602 3901 -2896 562 330 76 53 chr5 98453186 98453750 -104631782 + L1ME LINE L1 25 601 -5469 611 75 0 0 chr5 98454372 98454452 -104631080 + MADE1 DNA Mariner 1 80 0 26 0 0 0 chr5 98454530 98454556 -104630976 + AT_rich Low_complexity Low_complexity 1 26 0 342 266 133 70 chr5 98455015 98455301 -104630231 - L2 LINE L2 0 3313 3010 310 51 0 0 chr5 98455391 98455430 -104630102 - L1PA2 LINE L1 -277 5878 5840 2428 24 0 7 chr5 98455430 98455706 -104629826 + L1PA2 LINE L1 5864 6152 -3 279 197 42 0 chr5 98456111 98456182 -104629350 + (CA)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr5 98456810 98456832 -104628700 + AT_rich Low_complexity Low_complexity 1 22 0 951 287 191 25 chr5 98456972 98457453 -104628079 + L2 LINE L2 2119 2679 -635 639 318 88 43 chr5 98458762 98459184 -104626348 + L2 LINE L2 2868 3308 -5 42 36 0 0 chr5 98459312 98459368 -104626164 + AT_rich Low_complexity Low_complexity 1 56 0 1513 254 18 15 chr5 98459587 98460044 -104625488 + L1M4 LINE L1 3812 4269 -1877 24 53 0 0 chr5 98462803 98462841 -104622691 + AT_rich Low_complexity Low_complexity 1 38 0 1774 139 21 4 chr5 98462841 98463122 -104622410 - AluSx SINE Alu -26 286 1 1528 271 58 16 chr5 98463447 98463931 -104621601 + LTR33 LTR ERVL 9 512 -9 395 233 0 11 chr5 98463961 98464051 -104621481 + MER20B DNA MER1_type 1 89 -694 748 271 35 69 chr5 98464056 98464506 -104621026 + L2 LINE L2 2572 3125 -188 231 299 164 8 chr5 98464685 98464819 -104620713 - MIR SINE MIR -37 225 71 1479 154 22 8 chr5 98465596 98465863 -104619669 - L1PB4 LINE L1 -4 6152 5882 302 349 37 0 chr5 98465963 98466072 -104619460 + MIR SINE MIR 40 152 -56 823 176 107 0 chr5 98466366 98466525 -104619007 - MER45A DNA AcHobo 0 178 3 21 71 0 0 chr5 98466681 98466723 -104618809 + AT_rich Low_complexity Low_complexity 1 42 0 2005 148 0 0 chr5 98467064 98467375 -104618157 + AluSx SINE Alu 1 311 -1 2343 98 3 0 chr5 98468635 98468942 -104616590 + AluSp SINE Alu 6 313 0 21 0 0 0 chr5 98468998 98469019 -104616513 + AT_rich Low_complexity Low_complexity 1 21 0 1656 129 50 14 chr5 98471703 98471983 -104613549 - AluSx SINE Alu -22 290 1 23 0 0 0 chr5 98471986 98472009 -104613523 + AT_rich Low_complexity Low_complexity 1 23 0 1645 199 10 7 chr5 98473060 98473366 -104612166 - AluJo SINE Alu -5 307 1 2205 105 3 3 chr5 98473944 98474248 -104611284 + AluSg SINE Alu 3 306 -4 289 271 0 0 chr5 98476568 98476627 -104608905 - L2 LINE L2 -4 3309 3251 294 299 75 116 chr5 98477382 98477727 -104607805 + L2 LINE L2 2941 3271 -1 335 340 57 0 chr5 98477924 98478065 -104607467 + L2 LINE L2 3122 3270 -2 1855 170 0 3 chr5 98479077 98479359 -104606173 - AluSx SINE Alu -31 281 1 197 312 88 24 chr5 98479982 98480107 -104605425 + L2 LINE L2 2353 2485 -829 2395 132 20 3 chr5 98480297 98480654 -104604878 - THE1B LTR MaLR 0 364 2 431 233 50 33 chr5 98482517 98482637 -104602895 + L2 LINE L2 3192 3313 0 2075 40 36 0 chr5 98483750 98484000 -104601532 - AluY SINE Alu -17 294 36 22 0 0 0 chr5 98484999 98485021 -104600511 + AT_rich Low_complexity Low_complexity 1 22 0 466 331 75 8 chr5 98485263 98485529 -104600003 - L1M4 LINE L1 -1968 4178 3895 1524 121 62 29 chr5 98485628 98485934 -104599598 - L1MA7 LINE L1 -2 6289 5974 188 178 0 22 chr5 98486039 98486084 -104599448 + GA-rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 98486659 98486688 -104598844 + AT_rich Low_complexity Low_complexity 1 29 0 415 285 93 32 chr5 98486704 98486950 -104598582 - MIR SINE MIR 0 262 2 2505 70 0 13 chr5 98487306 98487619 -104597913 - AluY SINE Alu -2 309 1 246 81 0 0 chr5 98489003 98489040 -104596492 + (TG)n Simple_repeat Simple_repeat 2 38 0 2132 128 0 28 chr5 98489267 98489588 -104595944 + AluSx SINE Alu 1 312 0 208 227 0 0 chr5 98490253 98490297 -104595235 + CT-rich Low_complexity Low_complexity 1 44 0 346 278 102 52 chr5 98490767 98490974 -104594558 - MIR SINE MIR -44 218 3 2185 103 0 4 chr5 98491101 98491382 -104594150 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr5 98491383 98491407 -104594125 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 400 161 25 25 chr5 98491420 98491501 -104594031 + FLAM_A SINE Alu 46 126 -16 1769 166 19 7 chr5 98491598 98491905 -104593627 + AluJo SINE Alu 1 311 -1 721 236 127 52 chr5 98492618 98492758 -104592774 - MIR SINE MIR -15 247 82 2442 76 10 13 chr5 98492758 98493072 -104592460 + AluSp SINE Alu 1 313 0 721 236 127 52 chr5 98493072 98493160 -104592372 - MIR SINE MIR -180 82 2 193 364 54 31 chr5 98493220 98493349 -104592183 + L2 LINE L2 3177 3308 -5 366 23 0 0 chr5 98494688 98494731 -104590801 + (CA)n Simple_repeat Simple_repeat 1 43 0 200 159 0 23 chr5 98496086 98496130 -104589402 + (TA)n Simple_repeat Simple_repeat 2 44 0 195 354 0 13 chr5 98496369 98496448 -104589084 + L2 LINE L2 3235 3312 -1 * 204 252 48 117 chr5 98496443 98496546 -104588986 + L2 LINE L2 3209 3304 -9 191 337 0 24 chr5 98496859 98496942 -104588590 - MIR SINE MIR -75 133 53 2034 97 0 57 chr5 98497578 98497921 -104587611 - AluSx SINE Alu 0 326 1 612 181 169 17 chr5 98497975 98498152 -104587380 + MER3 DNA MER1_type 6 209 0 22 103 0 0 chr5 98498481 98498559 -104586973 + AT_rich Low_complexity Low_complexity 1 78 0 1816 174 3 7 chr5 98498583 98498876 -104586656 - AluJb SINE Alu -17 295 4 280 331 32 0 chr5 98499374 98499498 -104586034 - MER117 DNA MER1_type -29 168 41 315 153 111 28 chr5 98499765 98499837 -104585695 + MER5A DNA MER1_type 29 106 -83 24 0 0 0 chr5 98500028 98500052 -104585480 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 98500134 98500165 -104585367 + AT_rich Low_complexity Low_complexity 1 31 0 292 290 0 0 chr5 98500187 98500256 -104585276 - L2 LINE L2 -17 3296 3228 21 57 0 0 chr5 98501208 98501243 -104584289 + AT_rich Low_complexity Low_complexity 1 35 0 1025 201 0 24 chr5 98501987 98502196 -104583336 + MER3 DNA MER1_type 1 204 -5 420 366 58 58 chr5 98502357 98502824 -104582708 - L2 LINE L2 -1 3271 2805 284 272 155 0 chr5 98502845 98502948 -104582584 + L2 LINE L2 3152 3270 -2 30191 96 14 13 chr5 98503068 98508779 -104576753 - L1PA7 LINE L1 -11 6458 724 231 136 15 30 chr5 98509195 98509261 -104576271 + CT-rich Low_complexity Low_complexity 2 66 0 396 0 0 0 chr5 98509261 98509305 -104576227 + (CA)n Simple_repeat Simple_repeat 1 44 0 2039 113 21 0 chr5 98510884 98511175 -104574357 - AluY SINE Alu -14 297 1 210 338 90 23 chr5 98511619 98511752 -104573780 - MIR3 SINE MIR -49 159 18 1664 177 0 7 chr5 98511855 98512138 -104573394 - AluJb SINE Alu -31 281 1 437 15 0 62 chr5 98513135 98513224 -104572308 + L1PA2 LINE L1 6091 6155 0 203 257 95 86 chr5 98513623 98513728 -104571804 + L3 LINE CR1 1385 1490 -87 249 33 0 0 chr5 98515210 98515240 -104570292 + (T)n Simple_repeat Simple_repeat 1 30 0 386 338 27 7 chr5 98516191 98516339 -104569193 + L2 LINE L2 3158 3308 -5 470 324 77 49 chr5 98516515 98516609 -104568923 + MIR SINE MIR 3 93 -169 1468 191 6 32 chr5 98516609 98516923 -104568609 - AluJo SINE Alu -6 306 1 470 324 77 49 chr5 98516923 98517075 -104568457 + MIR SINE MIR 93 256 -6 213 279 59 15 chr5 98518792 98518860 -104566672 - L2 LINE L2 -16 3297 3227 1390 317 214 14 chr5 98519968 98520911 -104564621 + L3 LINE CR1 445 1576 -1 532 224 26 51 chr5 98521264 98521420 -104564112 + MIR SINE MIR 55 206 -56 190 358 67 15 chr5 98522070 98522204 -104563328 - MIR3 SINE MIR -52 156 16 23 0 0 0 chr5 98523133 98523156 -104562376 + AT_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr5 98525849 98525876 -104559656 + (T)n Simple_repeat Simple_repeat 1 27 0 21 71 0 0 chr5 98526126 98526168 -104559364 + AT_rich Low_complexity Low_complexity 1 42 0 1499 142 35 0 chr5 98527362 98527622 -104557910 + L1MA5A LINE L1 6026 6294 -3 199 240 104 31 chr5 98527657 98527753 -104557779 - MER5C DNA MER1_type -11 313 211 814 258 51 39 chr5 98528319 98528575 -104556957 - MIR SINE MIR -2 260 2 218 336 164 14 chr5 98528759 98528993 -104556539 + L2 LINE L2 2783 3049 -223 904 240 32 5 chr5 98529096 98529313 -104556219 + MER58A DNA MER1_type 1 223 -1 31 26 0 0 chr5 98529437 98529475 -104556057 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 98529638 98529661 -104555871 + AT_rich Low_complexity Low_complexity 1 23 0 1214 191 84 43 chr5 98530639 98530938 -104554594 - AluJb SINE Alu -1 311 1 2437 128 33 51 chr5 98530958 98531449 -104554083 + L1MA3 LINE L1 5824 6305 0 21 0 0 0 chr5 98533070 98533091 -104552441 + AT_rich Low_complexity Low_complexity 1 21 0 186 164 15 45 chr5 98536601 98536668 -104548864 + CT-rich Low_complexity Low_complexity 2 66 0 361 324 97 60 chr5 98538545 98538915 -104546617 + L2 LINE L2 2883 3266 -6 278 360 33 47 chr5 98539113 98539324 -104546208 + MIR SINE MIR 26 233 -29 496 300 72 52 chr5 98543817 98544124 -104541408 - L2 LINE L2 -40 3273 2961 308 341 18 55 chr5 98544090 98544254 -104541278 + MIR SINE MIR 34 191 -71 * 24 0 0 0 chr5 98544340 98544364 -104541168 + AT_rich Low_complexity Low_complexity 1 24 0 2280 106 0 3 chr5 98544917 98545220 -104540312 + AluSq SINE Alu 1 302 -11 198 0 0 0 chr5 98546391 98546413 -104539119 + (A)n Simple_repeat Simple_repeat 1 22 0 322 275 173 30 chr5 98546834 98547012 -104538520 + MIR3 SINE MIR 2 205 -3 216 0 0 0 chr5 98547018 98547042 -104538490 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 769 170 31 0 chr5 98547274 98547421 -104538111 - MIR SINE MIR -45 217 64 244 303 13 0 chr5 98548088 98548164 -104537368 + CT-rich Low_complexity Low_complexity 2 78 0 312 94 0 0 chr5 98548709 98548762 -104536770 + (TC)n Simple_repeat Simple_repeat 2 54 0 697 304 81 26 chr5 98549418 98549763 -104535769 - L3b LINE CR1 -2 1581 1218 1792 185 10 0 chr5 98550621 98550929 -104534603 + AluJo SINE Alu 1 311 -1 431 250 54 9 chr5 98551126 98551238 -104534294 - L2 LINE L2 0 3313 3197 2249 80 0 20 chr5 98553202 98553502 -104532030 - AluSc SINE Alu -11 298 5 394 331 0 42 chr5 98553617 98553759 -104531773 - MIR SINE MIR -109 153 18 1068 105 92 0 chr5 98555149 98555301 -104530231 - AluSc SINE Alu -19 290 125 2074 114 3 3 chr5 98555467 98555764 -104529768 - AluSx SINE Alu -15 297 1 193 239 70 99 chr5 98557866 98557937 -104527595 - MIR SINE MIR -38 224 156 2397 76 0 0 chr5 98558266 98558567 -104526965 + AluSg SINE Alu 1 301 -9 29 78 0 0 chr5 98558583 98558647 -104526885 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr5 98558789 98558810 -104526722 + AT_rich Low_complexity Low_complexity 1 21 0 1973 64 4 4 chr5 98559330 98559597 -104525935 - L1PA4 LINE L1 0 6155 5889 564 289 149 0 chr5 98559650 98559851 -104525681 - MIR SINE MIR -25 237 7 393 149 0 0 chr5 98560073 98560140 -104525392 + (CA)n Simple_repeat Simple_repeat 2 68 0 2414 127 38 71 chr5 98560170 98560433 -104525099 + Tigger2a DNA MER2_type 1 244 -2464 1664 96 0 0 chr5 98560433 98560653 -104524879 + AluSc SINE Alu 86 305 -4 2414 127 38 71 chr5 98560653 98560838 -104524694 + Tigger2a DNA MER2_type 244 434 0 26 0 0 0 chr5 98561130 98561156 -104524376 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 98561910 98561936 -104523596 + AT_rich Low_complexity Low_complexity 1 26 0 1382 137 20 131 chr5 98561987 98562330 -104523202 + AluYb8 SINE Alu 2 306 -2 1431 226 7 0 chr5 98562339 98562618 -104522914 + AluJo SINE Alu 1 281 -31 199 330 85 42 chr5 98564017 98564135 -104521397 - L2 LINE L2 -4 3268 3146 21 71 0 0 chr5 98564655 98564697 -104520835 + AT_rich Low_complexity Low_complexity 1 42 0 2191 118 56 8 chr5 98564917 98565273 -104520259 + THE1C LTR MaLR 1 373 -2 10103 110 13 49 chr5 98565275 98566915 -104518617 + THE1C-int LTR MaLR 1 1580 0 1990 143 62 8 chr5 98566915 98567271 -104518261 + THE1C LTR MaLR 1 375 0 617 296 6 12 chr5 98570614 98570786 -104514746 + MER5B DNA MER1_type 1 171 -7 180 77 0 0 chr5 98571700 98571726 -104513806 + (CA)n Simple_repeat Simple_repeat 1 26 0 1561 146 24 95 chr5 98572909 98573212 -104512320 - L1MA7 LINE L1 -171 6120 5797 2054 124 0 25 chr5 98573212 98573527 -104512005 - AluSx SINE Alu -5 307 1 1561 146 24 95 chr5 98573527 98573585 -104511947 - L1MA7 LINE L1 -494 5797 5784 830 150 7 0 chr5 98573585 98573738 -104511794 + L1MA6 LINE L1 6147 6300 0 1561 146 24 95 chr5 98573738 98573753 -104511779 - L1MA7 LINE L1 -507 5784 5770 348 325 60 0 chr5 98573762 98573879 -104511653 + MER5B DNA MER1_type 2 125 -53 297 205 26 0 chr5 98573886 98574003 -104511529 + (TA)n Simple_repeat Simple_repeat 1 120 0 1146 212 17 55 chr5 98574003 98574164 -104511368 - AluJo SINE Alu -16 286 139 1998 102 31 14 chr5 98574164 98574458 -104511074 - AluSx SINE Alu -13 299 1 1146 212 17 55 chr5 98574458 98574589 -104510943 - AluJo SINE Alu -163 139 5 2462 61 0 3 chr5 98575282 98575592 -104509940 - AluY SINE Alu -2 309 1 778 220 68 55 chr5 98576748 98576984 -104508548 + MIR SINE MIR 20 258 -4 525 32 0 0 chr5 98578649 98578712 -104506820 + (TA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr5 98579611 98579632 -104505900 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 98580734 98580758 -104504774 + (TTA)n Simple_repeat Simple_repeat 1 24 0 267 174 0 0 chr5 98581378 98581424 -104504108 - L2 LINE L2 0 3313 3268 25 0 0 0 chr5 98581757 98581782 -104503750 + AT_rich Low_complexity Low_complexity 1 25 0 428 289 91 12 chr5 98582014 98582256 -104503276 - MIR SINE MIR -1 261 1 198 71 0 0 chr5 98582437 98582465 -104503067 + (CA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr5 98583097 98583118 -104502414 + (T)n Simple_repeat Simple_repeat 1 21 0 22 70 0 0 chr5 98584212 98584255 -104501277 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr5 98585443 98585469 -104500063 + (T)n Simple_repeat Simple_repeat 1 26 0 30 0 0 0 chr5 98588749 98588779 -104496753 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 98591513 98591534 -104493998 + AT_rich Low_complexity Low_complexity 1 21 0 224 260 14 0 chr5 98592593 98592666 -104492866 + (CG)n Simple_repeat Simple_repeat 2 75 0 425 65 0 16 chr5 98592677 98592739 -104492793 + (GGA)n Simple_repeat Simple_repeat 1 61 0 191 276 26 40 chr5 98595086 98595162 -104490370 - L2 LINE L2 -2577 737 663 28 61 0 0 chr5 98595293 98595342 -104490190 + AT_rich Low_complexity Low_complexity 1 49 0 186 103 0 0 chr5 98595680 98595709 -104489823 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 302 280 102 8 chr5 98595774 98595892 -104489640 + MIR SINE MIR 17 145 -63 901 164 6 18 chr5 98599844 98600009 -104485523 - MER3 DNA MER1_type -46 163 1 186 43 0 0 chr5 98600036 98600059 -104485473 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 312 303 0 30 chr5 98600162 98600261 -104485271 - MIR3 SINE MIR -26 182 87 2377 60 0 41 chr5 98600771 98601087 -104484445 - AluY SINE Alu -8 303 1 197 100 50 0 chr5 98601187 98601227 -104484305 + T-rich Low_complexity Low_complexity 2 43 0 37 23 0 0 chr5 98601368 98601412 -104484120 + AT_rich Low_complexity Low_complexity 1 44 0 463 256 31 38 chr5 98601641 98601801 -104483731 + MIR SINE MIR 63 221 -41 618 108 29 0 chr5 98602679 98602781 -104482751 - AluSx SINE Alu 0 310 206 839 136 0 0 chr5 98602782 98602900 -104482632 - AluSx SINE Alu -195 118 1 31 0 0 0 chr5 98602950 98602981 -104482551 + AT_rich Low_complexity Low_complexity 1 31 0 614 316 28 8 chr5 98603448 98603701 -104481831 - MIR SINE MIR -3 259 2 568 298 123 4 chr5 98603768 98603996 -104481536 - MARNA DNA Mariner -51 535 281 317 275 38 46 chr5 98604336 98604467 -104481065 + MIR SINE MIR 132 261 -1 240 154 0 0 chr5 98606199 98606251 -104479281 + CT-rich Low_complexity Low_complexity 2 53 0 222 37 0 0 chr5 98606322 98606349 -104479183 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 250 134 0 chr5 98607272 98607384 -104478148 + MER5A DNA MER1_type 35 161 -28 22 0 0 0 chr5 98608417 98608439 -104477093 + AT_rich Low_complexity Low_complexity 1 22 0 277 382 0 10 chr5 98608859 98608961 -104476571 - MIR SINE MIR -87 121 21 21 0 0 0 chr5 98610808 98610829 -104474703 + AT_rich Low_complexity Low_complexity 1 21 0 221 193 68 68 chr5 98611856 98611944 -104473588 + MIR SINE MIR 119 206 -56 190 358 67 15 chr5 98612578 98612712 -104472820 - MIR3 SINE MIR -52 156 16 23 0 0 0 chr5 98613642 98613665 -104471867 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr5 98616358 98616381 -104469151 + (T)n Simple_repeat Simple_repeat 1 23 0 21 71 0 0 chr5 98616631 98616673 -104468859 + AT_rich Low_complexity Low_complexity 1 42 0 1464 147 39 0 chr5 98617867 98618126 -104467406 + L1MA5A LINE L1 6026 6294 -3 814 258 51 39 chr5 98618822 98619078 -104466454 - MIR SINE MIR -2 260 2 218 336 164 14 chr5 98619262 98619496 -104466036 + L2 LINE L2 2783 3049 -223 904 240 32 5 chr5 98619599 98619816 -104465716 + MER58A DNA MER1_type 1 223 -1 31 26 0 0 chr5 98619940 98619978 -104465554 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 98620141 98620164 -104465368 + AT_rich Low_complexity Low_complexity 1 23 0 1214 191 84 43 chr5 98621142 98621441 -104464091 - AluJb SINE Alu -1 311 1 2423 130 33 51 chr5 98621461 98621952 -104463580 + L1MA3 LINE L1 5824 6305 0 21 0 0 0 chr5 98623578 98623599 -104461933 + AT_rich Low_complexity Low_complexity 1 21 0 186 164 15 45 chr5 98627166 98627233 -104458299 + CT-rich Low_complexity Low_complexity 2 66 0 361 324 97 60 chr5 98629109 98629479 -104456053 + L2 LINE L2 2883 3266 -6 278 360 33 47 chr5 98629677 98629888 -104455644 + MIR SINE MIR 26 233 -29 402 296 82 53 chr5 98634379 98634683 -104450849 - L2 LINE L2 -40 3273 2961 303 356 18 49 chr5 98634650 98634813 -104450719 + MIR SINE MIR 34 191 -71 * 24 0 0 0 chr5 98634899 98634923 -104450609 + AT_rich Low_complexity Low_complexity 1 24 0 2280 106 0 3 chr5 98635476 98635779 -104449753 + AluSq SINE Alu 1 302 -11 198 0 0 0 chr5 98636950 98636972 -104448560 + (A)n Simple_repeat Simple_repeat 1 22 0 307 280 175 30 chr5 98637393 98637570 -104447962 + MIR3 SINE MIR 2 205 -3 216 0 0 0 chr5 98637576 98637600 -104447932 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 20812 74 7 6 chr5 98637962 98640830 -104444702 - L1P LINE L1 -2399 3747 878 433 111 37 37 chr5 98640824 98640905 -104444627 + L1P LINE L1 5050 5130 -1016 * 29 0 0 0 chr5 98641526 98641555 -104443977 + AT_rich Low_complexity Low_complexity 1 29 0 39 80 0 0 chr5 98641668 98641756 -104443776 + AT_rich Low_complexity Low_complexity 1 88 0 285 183 0 0 chr5 98645344 98645404 -104440128 + (TA)n Simple_repeat Simple_repeat 2 61 0 1152 177 0 5 chr5 98645447 98645645 -104439887 + MER3 DNA MER1_type 1 197 -12 2146 117 7 0 chr5 98646166 98646495 -104439037 + AluSq SINE Alu 1 313 0 23 68 0 0 chr5 98646741 98646785 -104438747 + AT_rich Low_complexity Low_complexity 1 44 0 1719 219 49 37 chr5 98647604 98648199 -104437333 - L1MC5 LINE L1 -45 7916 7315 1538 228 74 68 chr5 98648236 98648848 -104436684 - L1MC5 LINE L1 -722 7239 6610 252 100 0 0 chr5 98648848 98648888 -104436644 + (TG)n Simple_repeat Simple_repeat 2 41 0 1538 228 74 68 chr5 98648888 98648937 -104436595 - L1MC5 LINE L1 -1351 6610 6563 1457 259 124 26 chr5 98649305 98649877 -104435655 - L1MEc LINE L1 -5734 662 35 27 0 0 0 chr5 98649944 98649971 -104435561 + AT_rich Low_complexity Low_complexity 1 27 0 349 250 87 11 chr5 98650149 98650241 -104435291 - L2 LINE L2 0 3272 3174 2538 202 50 45 chr5 98650259 98650933 -104434599 + L1MD2 LINE L1 5669 6346 -13 1611 69 5 23 chr5 98652952 98653170 -104432362 - AluSg/x SINE Alu -12 298 85 1172 187 41 29 chr5 98654442 98654647 -104430885 - MER33 DNA MER1_type -2263 322 110 2176 91 0 32 chr5 98654647 98654955 -104430577 + AluY SINE Alu 1 298 -13 1172 187 41 29 chr5 98654955 98655064 -104430468 - MER33 DNA MER1_type -2475 110 4 342 270 159 16 chr5 98656101 98656227 -104429305 - L2 LINE L2 0 3272 3129 3618 65 0 0 chr5 98658661 98659121 -104426411 - L1PA8 LINE L1 -3 6169 5710 214 312 13 13 chr5 98659293 98659370 -104426162 - L2 LINE L2 -1 3271 3195 366 304 7 14 chr5 98659389 98659527 -104426005 - MLT1L LTR MaLR -2 613 477 220 338 126 13 chr5 98659794 98659945 -104425587 - L2 LINE L2 -212 3060 2893 381 200 0 14 chr5 98660061 98660131 -104425401 - FRAM SINE Alu -51 115 47 301 322 127 0 chr5 98660153 98660271 -104425261 + L2 LINE L2 3133 3265 -7 241 290 81 0 chr5 98660517 98660579 -104424953 - L3 LINE CR1 -13 1564 1498 28 29 0 0 chr5 98660693 98660728 -104424804 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 98661473 98661496 -104424036 + AT_rich Low_complexity Low_complexity 1 23 0 304 355 6 41 chr5 98662028 98662197 -104423335 - MIR3 SINE MIR -13 195 33 23 0 0 0 chr5 98662386 98662409 -104423123 + AT_rich Low_complexity Low_complexity 1 23 0 28 86 0 0 chr5 98663542 98663612 -104421920 + AT_rich Low_complexity Low_complexity 1 70 0 220 279 13 13 chr5 98663776 98663855 -104421677 + GA-rich Low_complexity Low_complexity 2 80 0 1901 130 7 7 chr5 98664161 98664454 -104421078 - Tigger3b DNA MER2_type -1 1231 939 5683 96 38 6 chr5 98664596 98665467 -104420065 - Tigger3b DNA MER2_type -297 934 36 287 299 64 10 chr5 98665975 98666093 -104419439 - MIR SINE MIR -67 141 40 1392 142 80 40 chr5 98666094 98666324 -104419208 + MER33 DNA MER1_type 1 247 -2338 2176 114 0 3 chr5 98666324 98666622 -104418910 - AluSq SINE Alu -16 297 1 1392 142 80 40 chr5 98666622 98666693 -104418839 + MER33 DNA MER1_type 247 314 -10 22 35 0 0 chr5 98669935 98669964 -104415568 + AT_rich Low_complexity Low_complexity 1 29 0 507 125 0 0 chr5 98670248 98670328 -104415204 + MADE1 DNA Mariner 1 80 0 422 363 38 52 chr5 98671097 98671364 -104414168 + L2 LINE L2 3004 3266 -6 216 196 0 0 chr5 98675088 98675134 -104410398 + T-rich Low_complexity Low_complexity 1 46 0 289 74 0 93 chr5 98676831 98676885 -104408647 + L2 LINE L2 3264 3312 -1 41 58 0 0 chr5 98677836 98677905 -104407627 + AT_rich Low_complexity Low_complexity 1 69 0 32 26 0 0 chr5 98678527 98678566 -104406966 + AT_rich Low_complexity Low_complexity 1 39 0 2218 93 0 0 chr5 98678585 98678886 -104406646 - AluSg1 SINE Alu 0 301 1 1189 175 13 4 chr5 98678887 98679121 -104406411 - L1MA8 LINE L1 -45 6246 6011 354 61 0 0 chr5 98680965 98681014 -104404518 + (CA)n Simple_repeat Simple_repeat 1 49 0 190 404 50 0 chr5 98683255 98683354 -104402178 + L2 LINE L2 3210 3313 0 254 267 0 0 chr5 98684217 98684277 -104401255 - MLT1L LTR MaLR 0 615 556 265 230 20 0 chr5 98684504 98684604 -104400928 + (TA)n Simple_repeat Simple_repeat 2 103 0 1619 181 7 3 chr5 98684605 98684893 -104400639 - AluSx SINE Alu -23 289 1 246 250 15 29 chr5 98685057 98685125 -104400407 + AluJ/FRAM SINE Alu 216 282 -20 255 376 0 0 chr5 98685246 98685331 -104400201 + MIR SINE MIR 48 132 -130 236 256 103 0 chr5 98686352 98686430 -104399102 - MIR SINE MIR -55 207 122 25 51 0 0 chr5 98688893 98688932 -104396600 + AT_rich Low_complexity Low_complexity 1 39 0 543 56 0 0 chr5 98692365 98692436 -104393096 + (TC)n Simple_repeat Simple_repeat 1 71 0 214 288 27 0 chr5 98694798 98694871 -104390661 - L2 LINE L2 -303 2969 2895 226 132 38 0 chr5 98695936 98695989 -104389543 + (TA)n Simple_repeat Simple_repeat 2 56 0 250 203 94 0 chr5 98696109 98696173 -104389359 - MIR SINE MIR -96 166 97 22 56 0 0 chr5 98696175 98696211 -104389321 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 98697255 98697276 -104388256 + AT_rich Low_complexity Low_complexity 1 21 0 446 224 142 44 chr5 98698965 98699170 -104386362 - MLT1J LTR MaLR -247 264 40 1477 244 0 13 chr5 98699260 98699620 -104385912 + AluJo SINE Alu 1 356 0 186 356 129 0 chr5 98699775 98699876 -104385656 + MIR3 SINE MIR 11 124 -84 2010 111 14 4 chr5 98700011 98700314 -104385218 + AluSx SINE Alu 1 306 0 22 0 0 0 chr5 98700935 98700957 -104384575 + AT_rich Low_complexity Low_complexity 1 22 0 2513 59 0 26 chr5 98701626 98701967 -104383565 + L1PA6 LINE L1 5823 6154 0 211 308 0 15 chr5 98702006 98702071 -104383461 + L2 LINE L2 2242 2305 -1009 369 340 150 36 chr5 98702807 98703403 -104382129 + L2 LINE L2 2601 3272 0 1525 140 159 0 chr5 98703793 98704050 -104381482 + AluSx SINE Alu 1 298 -4 191 308 93 73 chr5 98704798 98705045 -104380487 - L2 LINE L2 -213 3059 2808 540 89 13 0 chr5 98706086 98706165 -104379367 + MADE1 DNA Mariner 1 80 0 336 370 75 57 chr5 98707049 98707436 -104378096 - L2 LINE L2 -10 3262 2869 1412 203 29 21 chr5 98708811 98709116 -104376416 - AluJo SINE Alu 0 307 1 29 47 0 0 chr5 98709157 98709200 -104376332 + AT_rich Low_complexity Low_complexity 1 43 0 1436 213 8 105 chr5 98709602 98709647 -104375885 + MLT1A2 LTR MaLR 1 49 -325 2228 105 7 0 chr5 98709647 98709941 -104375591 + AluSp SINE Alu 1 296 -17 1436 213 8 105 chr5 98709941 98710295 -104375237 + MLT1A2 LTR MaLR 49 361 -13 280 248 10 79 chr5 98710309 98710410 -104375122 - L1ME LINE L1 -532 5638 5545 21 0 0 0 chr5 98711297 98711318 -104374214 + AT_rich Low_complexity Low_complexity 1 21 0 255 61 0 0 chr5 98711622 98711655 -104373877 + (GGGGA)n Simple_repeat Simple_repeat 1 33 0 2010 122 38 0 chr5 98711657 98711771 -104373761 + AluSc SINE Alu 5 113 -196 213 39 0 0 chr5 98711771 98711797 -104373735 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2010 122 38 0 chr5 98711797 98711969 -104373563 + AluSc SINE Alu 113 302 -7 441 248 0 0 chr5 98711982 98712111 -104373421 + GA-rich Low_complexity Low_complexity 2 130 0 234 97 0 0 chr5 98712179 98712210 -104373322 - U2 snRNA snRNA -153 35 5 339 252 82 41 chr5 98712235 98712382 -104373150 + MIR SINE MIR 91 243 -19 303 256 0 0 chr5 98712694 98712772 -104372760 - MER103 DNA DNA -86 80 3 614 286 116 8 chr5 98713650 98713891 -104371641 - L2 LINE L2 0 3313 3047 850 88 0 22 chr5 98713896 98714064 -104371468 + FLAM_C SINE Alu 1 165 0 2453 289 125 38 chr5 98714142 98714702 -104370830 - L2 LINE L2 -259 3054 2544 1296 206 54 68 chr5 98714702 98715070 -104370462 - MLT1A1 LTR MaLR -2 363 1 2453 289 125 38 chr5 98715070 98715873 -104369659 - L2 LINE L2 -769 2544 1572 1288 158 0 14 chr5 98715873 98716088 -104369444 + AluJb SINE Alu 83 294 -18 451 267 68 47 chr5 98716227 98716418 -104369114 - L2 LINE L2 0 3313 3119 275 347 7 41 chr5 98716957 98717104 -104368428 + MIR SINE MIR 35 176 -86 1322 178 12 0 chr5 98717159 98717417 -104368115 + L1MA3 LINE L1 6045 6305 0 253 360 54 9 chr5 98717440 98717551 -104367981 - MIR SINE MIR -130 132 17 307 194 0 42 chr5 98719057 98719129 -104366403 - L1MC4 LINE L1 -1337 6705 6637 231 319 0 0 chr5 98719413 98719482 -104366050 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 195 69 0 0 chr5 98722856 98722885 -104362647 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 2232 125 25 19 chr5 98723226 98723587 -104361945 + THE1B LTR MaLR 1 363 -1 466 163 12 0 chr5 98725768 98725848 -104359684 - Tigger5 DNA MER2_type 0 2323 2243 305 310 0 0 chr5 98726039 98726127 -104359405 + polypyrimidine Low_complexity Low_complexity 1 88 0 305 298 19 50 chr5 98726207 98726368 -104359164 + MIR SINE MIR 33 188 -74 1405 198 62 25 chr5 98726404 98726757 -104358775 + MER47A DNA MER2_type 1 366 0 31311 67 5 4 chr5 98726854 98731038 -104354494 - L1PA5 LINE L1 -1071 5075 888 7023 53 3 3 chr5 98731040 98732156 -104353376 + L1PA5 LINE L1 5050 6165 0 287 348 67 39 chr5 98732268 98732446 -104353086 + MIR3 SINE MIR 20 202 -6 322 316 46 53 chr5 98732711 98732863 -104352669 + MIR3 SINE MIR 23 173 -35 291 54 0 0 chr5 98733117 98733154 -104352378 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 98735034 98735057 -104350475 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 98736572 98736598 -104348934 + (T)n Simple_repeat Simple_repeat 1 26 0 2024 197 80 88 chr5 98736643 98737292 -104348240 + MLT1E1 LTR MaLR 3 646 -8 1553 140 35 73 chr5 98737530 98737844 -104347688 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 98738049 98738070 -104347462 + AT_rich Low_complexity Low_complexity 1 21 0 656 255 132 56 chr5 98738123 98738640 -104346892 + L1ME4a LINE L1 5545 6100 -21 2169 122 0 19 chr5 98738641 98738960 -104346572 - AluSq SINE Alu 0 313 1 634 300 111 26 chr5 98739146 98739533 -104345999 + Charlie8 DNA MER1_type 2 421 -1996 2440 91 0 0 chr5 98741100 98741429 -104344103 - pTR5 LTR ERV1 -2044 394 66 349 262 10 0 chr5 98741429 98741532 -104344000 - LTR30 LTR ERV1 -80 642 539 4242 138 66 33 chr5 98741532 98742501 -104343031 - pTR5 LTR ERV1 -418 2020 775 279 336 49 62 chr5 98742588 98742814 -104342718 - L2 LINE L2 -181 3091 2869 21 0 0 0 chr5 98743067 98743088 -104342444 + AT_rich Low_complexity Low_complexity 1 21 0 7630 185 30 46 chr5 98743088 98743132 -104342400 - L1MA9 LINE L1 -40 6272 6229 2192 112 0 3 chr5 98743132 98743428 -104342104 + AluSx SINE Alu 1 295 -17 7630 185 30 46 chr5 98743428 98743883 -104341649 - L1MA9 LINE L1 -83 6229 5768 285 29 0 0 chr5 98743883 98743917 -104341615 + (TG)n Simple_repeat Simple_repeat 1 34 0 7630 185 30 46 chr5 98743917 98744101 -104341431 - L1MA9 LINE L1 -544 5768 5583 1591 184 6 41 chr5 98744101 98744417 -104341115 - AluJo SINE Alu -7 305 1 7630 185 30 46 chr5 98744417 98745297 -104340235 - L1MA9 LINE L1 -729 5583 4690 2015 140 0 7 chr5 98745297 98745597 -104339935 - AluSx SINE Alu -14 298 1 7630 185 30 46 chr5 98745597 98746344 -104339188 - L1MA9 LINE L1 -1622 4690 4011 2810 10 0 0 chr5 98746344 98746650 -104338882 + AluYb8 SINE Alu 1 306 -12 7630 185 30 46 chr5 98746650 98747017 -104338515 - L1MA9 LINE L1 -2301 4011 3640 2315 149 14 14 chr5 98747795 98748217 -104337315 - L1MA9 LINE L1 -8 6304 5883 368 329 40 33 chr5 98749463 98749615 -104335917 - MER5B DNA MER1_type -25 153 1 565 259 159 18 chr5 98749869 98750089 -104335443 + L2 LINE L2 3016 3266 -47 26 0 0 0 chr5 98751368 98751394 -104334138 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 98752351 98752379 -104333153 + AT_rich Low_complexity Low_complexity 1 28 0 219 226 0 19 chr5 98753214 98753267 -104332265 - L2 LINE L2 -218 3054 3003 1898 163 7 3 chr5 98756329 98756635 -104328897 + AluJb SINE Alu 1 307 -5 21 0 0 0 chr5 98756896 98756917 -104328615 + AT_rich Low_complexity Low_complexity 1 21 0 210 237 0 0 chr5 98760288 98760326 -104325206 + (TG)n Simple_repeat Simple_repeat 1 38 0 640 227 287 4 chr5 98760644 98760895 -104324637 + MER5C DNA MER1_type 3 324 0 216 149 0 0 chr5 98761909 98761956 -104323576 + (CA)n Simple_repeat Simple_repeat 2 48 0 186 43 0 0 chr5 98763305 98763328 -104322204 + (TA)n Simple_repeat Simple_repeat 1 23 0 855 230 87 4 chr5 98763332 98763584 -104321948 - MER33 DNA MER1_type -47 277 5 2652 89 14 3 chr5 98764323 98764683 -104320849 - THE1B LTR MaLR 0 364 1 10014 110 37 34 chr5 98764683 98766259 -104319273 - THE1B-int LTR MaLR 0 1580 1 2501 124 3 3 chr5 98766259 98766623 -104318909 - THE1B LTR MaLR 0 364 1 798 316 65 23 chr5 98766747 98767225 -104318307 + LTR33A LTR ERVL 26 523 0 451 305 169 0 chr5 98767267 98767480 -104318052 + L3 LINE CR1 262 510 -1067 932 290 95 3 chr5 98767498 98767836 -104317696 + L3 LINE CR1 1208 1576 -1 2467 57 13 0 chr5 98768508 98768807 -104316725 - AluY SINE Alu -8 303 1 517 228 0 0 chr5 98768873 98768965 -104316567 - MER7A DNA MER2_type -5 331 240 * 570 180 0 90 chr5 98768962 98769084 -104316448 - MER7A DNA MER2_type -232 114 6 259 121 35 0 chr5 98769123 98769181 -104316351 + (TGAA)n Simple_repeat Simple_repeat 4 63 0 497 44 15 0 chr5 98771461 98771529 -104314003 + (TC)n Simple_repeat Simple_repeat 2 70 0 195 42 0 0 chr5 98771760 98771784 -104313748 + (CA)n Simple_repeat Simple_repeat 2 25 0 339 315 63 31 chr5 98771910 98772132 -104313400 + MIR SINE MIR 20 248 -14 2115 124 3 3 chr5 98772390 98772689 -104312843 - AluSx SINE Alu -13 299 1 268 258 0 16 chr5 98773199 98773261 -104312271 + MIR SINE MIR 96 156 -106 1484 172 127 24 chr5 98773301 98773639 -104311893 + MLT1A2 LTR MaLR 1 373 -1 291 310 33 31 chr5 98774133 98774242 -104311290 - MIR SINE MIR -62 146 38 236 227 186 31 chr5 98774277 98774332 -104311200 + MER5A DNA MER1_type 55 100 -89 1469 194 0 52 chr5 98774332 98774642 -104310890 - AluJo SINE Alu -18 294 1 236 227 186 31 chr5 98774642 98774683 -104310849 + MER5A DNA MER1_type 100 166 -23 860 159 0 0 chr5 98776049 98776175 -104309357 - FLAM_C SINE Alu -17 126 1 207 100 0 0 chr5 98776217 98776247 -104309285 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 816 205 23 18 chr5 98776837 98777008 -104308524 - FRAM SINE Alu -4 172 1 244 288 144 14 chr5 98777240 98777379 -104308153 - MER117 DNA MER1_type -18 179 23 183 80 0 0 chr5 98777807 98777832 -104307700 + (T)n Simple_repeat Simple_repeat 1 25 0 1766 54 0 0 chr5 98777850 98778072 -104307460 - L1PA5 LINE L1 0 6154 5933 2261 41 0 0 chr5 98778072 98778339 -104307193 + L1P2 LINE L1 5543 5809 -345 749 267 22 47 chr5 98778640 98778899 -104306633 - MIR SINE MIR -5 257 8 343 314 192 13 chr5 98780970 98781126 -104304406 - MIR3 SINE MIR -11 197 14 26 30 0 0 chr5 98781941 98781974 -104303558 + AT_rich Low_complexity Low_complexity 1 33 0 580 241 121 0 chr5 98783941 98784115 -104301417 + MIR SINE MIR 68 262 0 180 0 0 0 chr5 98784561 98784581 -104300951 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1800 150 3 21 chr5 98784917 98785204 -104300328 + AluJo SINE Alu 5 286 -26 374 291 89 19 chr5 98787503 98787661 -104297871 - MIR SINE MIR -74 188 20 195 310 0 0 chr5 98787823 98787881 -104297651 - L3 LINE CR1 -2 1575 1518 4538 74 22 3 chr5 98788110 98789123 -104296409 + MER11A LTR ERVK 1 1266 0 283 320 151 32 chr5 98789123 98789342 -104296190 - L3 LINE CR1 -309 1268 1024 32 43 0 0 chr5 98790265 98790311 -104295221 + AT_rich Low_complexity Low_complexity 1 46 0 243 0 0 0 chr5 98791861 98791888 -104293644 + (A)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr5 98791935 98791956 -104293576 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 98793339 98793363 -104292169 + AT_rich Low_complexity Low_complexity 1 24 0 491 297 43 27 chr5 98794799 98794984 -104290548 - MIR SINE MIR 0 262 75 244 231 31 0 chr5 98795174 98795239 -104290293 + MIR SINE MIR 87 153 -109 1883 115 39 18 chr5 98795324 98795640 -104289892 + AluSx SINE Alu 6 312 0 193 337 50 10 chr5 98798486 98798587 -104286945 + L2 LINE L2 1765 1869 -1445 * 254 231 286 11 chr5 98798565 98798656 -104286876 + MIR SINE MIR 53 168 -94 217 279 13 13 chr5 98798673 98798752 -104286780 + (TA)n Simple_repeat Simple_repeat 2 80 0 641 335 145 30 chr5 98798874 98799597 -104285935 + L2 LINE L2 1934 2739 -575 257 373 26 85 chr5 98799675 98799981 -104285551 + L2 LINE L2 2919 3206 -66 1915 167 3 3 chr5 98800781 98801093 -104284439 - AluSx SINE Alu 0 312 1 343 199 27 22 chr5 98801379 98801606 -104283926 + (TA)n Simple_repeat Simple_repeat 1 228 0 713 304 31 27 chr5 98802593 98802853 -104282679 + MIR SINE MIR 2 262 0 207 162 0 0 chr5 98803708 98803745 -104281787 + (TG)n Simple_repeat Simple_repeat 1 37 0 398 368 87 13 chr5 98804913 98805144 -104280388 - MIR SINE MIR 0 262 15 1971 133 4 0 chr5 98805621 98805900 -104279632 + AluSx SINE Alu 1 280 -32 513 32 0 0 chr5 98805901 98805964 -104279568 + (CTAA)n Simple_repeat Simple_repeat 2 64 0 379 134 24 0 chr5 98806504 98806586 -104278946 + (TA)n Simple_repeat Simple_repeat 2 85 0 2260 125 0 0 chr5 98806587 98806899 -104278633 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 98807048 98807070 -104278462 + AT_rich Low_complexity Low_complexity 1 22 0 688 132 9 0 chr5 98807071 98807185 -104278347 - L1MA6 LINE L1 -2 6298 6184 2599 166 18 6 chr5 98807185 98807690 -104277842 - L1 LINE L1 -1360 4786 4276 539 65 11 53 chr5 98808709 98808815 -104276717 + L1 LINE L1 5240 5341 -805 1914 70 7 29 chr5 98809079 98809352 -104276180 - L1PA10 LINE L1 0 6168 5902 852 226 0 15 chr5 98809454 98809653 -104275879 - L1ME1 LINE L1 -5 6161 5966 273 262 143 0 chr5 98809653 98809737 -104275795 - U6 snRNA snRNA 0 107 12 21 57 0 0 chr5 98810640 98810675 -104274857 + AT_rich Low_complexity Low_complexity 1 35 0 234 297 31 0 chr5 98813211 98813275 -104272257 - MIR3 SINE MIR -34 174 109 621 310 115 16 chr5 98813341 98813664 -104271868 + MLT1J2 LTR MaLR 84 438 -12 1828 108 8 0 chr5 98814023 98814273 -104271259 + AluSp SINE Alu 54 305 -8 428 311 170 9 chr5 98814347 98814559 -104270973 + Charlie8 DNA MER1_type 22 267 -2150 310 170 0 0 chr5 98814559 98814612 -104270920 - Ricksha DNA DNA -2344 902 850 506 229 8 25 chr5 98814665 98814783 -104270749 - MLT2B1 LTR ERVL -66 454 339 897 274 32 16 chr5 98814904 98815152 -104270380 - MIR SINE MIR -10 252 1 278 250 15 0 chr5 98816447 98816515 -104269017 + (TA)n Simple_repeat Simple_repeat 1 69 0 2012 224 89 12 chr5 98816751 98817269 -104268263 + Charlie1a DNA MER1_type 6 563 -892 2389 270 52 30 chr5 98817269 98818198 -104267334 - L1M4 LINE L1 -1203 4943 3995 225 275 58 0 chr5 98818586 98818655 -104266877 + L1ME3A LINE L1 5565 5637 -529 534 276 35 31 chr5 98818664 98818918 -104266614 + L1ME3A LINE L1 5693 5947 -223 275 220 0 0 chr5 98819326 98819385 -104266147 + L3 LINE CR1 683 741 -836 26 0 0 0 chr5 98820372 98820398 -104265134 + AT_rich Low_complexity Low_complexity 1 26 0 203 366 36 18 chr5 98823623 98823735 -104261797 + L2 LINE L2 3200 3313 0 395 301 38 22 chr5 98826395 98826578 -104258954 - MER5A DNA MER1_type 0 189 4 21 0 0 0 chr5 98827240 98827261 -104258271 + AT_rich Low_complexity Low_complexity 1 21 0 1464 189 48 63 chr5 98829713 98830109 -104255423 - MLT1B LTR MaLR 0 390 1 277 292 53 84 chr5 98830183 98830302 -104255230 - MLT1I LTR MaLR -26 383 262 947 208 6 0 chr5 98830302 98830475 -104255057 + MER96 DNA MER1_type 2 175 0 277 292 53 84 chr5 98830475 98830639 -104254893 - MLT1I LTR MaLR -147 262 109 376 316 152 31 chr5 98830739 98830995 -104254537 - MLT1H1 LTR MaLR -8 547 255 1387 173 41 62 chr5 98831322 98831691 -104253841 - MLT1A1 LTR MaLR 0 365 5 416 239 210 23 chr5 98832996 98833172 -104252360 - MLT1H1 LTR MaLR 0 555 347 2323 74 34 0 chr5 98834043 98834340 -104251192 + AluY SINE Alu 1 307 -4 383 304 110 17 chr5 98834384 98834621 -104250911 + LTR16C LTR ERVL 233 491 0 33 25 0 0 chr5 98834658 98834698 -104250834 + AT_rich Low_complexity Low_complexity 1 40 0 227 175 0 0 chr5 98834724 98834764 -104250768 + (CAT)n Simple_repeat Simple_repeat 3 42 0 734 166 23 6 chr5 98836811 98836986 -104248546 + CT-rich Low_complexity Low_complexity 2 179 0 209 161 0 0 chr5 98836990 98837021 -104248511 + polypyrimidine Low_complexity Low_complexity 4 34 0 5661 152 8 12 chr5 98837108 98838890 -104246642 - L1PB3 LINE L1 -2 6152 4377 186 71 0 0 chr5 98839067 98839095 -104246437 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 639 269 148 9 chr5 98840117 98840340 -104245192 + MIR SINE MIR 9 262 0 180 0 0 0 chr5 98841056 98841076 -104244456 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2370 68 0 0 chr5 98841192 98841486 -104244046 + AluY SINE Alu 1 294 -17 210 37 0 0 chr5 98841492 98841519 -104244013 + (CA)n Simple_repeat Simple_repeat 2 28 0 302 164 15 0 chr5 98841519 98841580 -104243952 + (TA)n Simple_repeat Simple_repeat 1 62 0 406 323 97 65 chr5 98842068 98842688 -104242844 - L2 LINE L2 -639 2675 2036 1346 192 8 152 chr5 98842745 98842812 -104242720 - MLT2D LTR ERVL -2 412 337 491 0 17 0 chr5 98842812 98842871 -104242661 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1346 192 8 152 chr5 98842871 98843282 -104242250 - MLT2D LTR ERVL -77 337 3 6199 160 123 72 chr5 98843283 98843534 -104241998 - ERVL-D LTR ERVL -6 5758 5521 270 0 0 0 chr5 98843534 98843564 -104241968 + (CA)n Simple_repeat Simple_repeat 2 31 0 6199 160 123 72 chr5 98843564 98844731 -104240801 - ERVL-D LTR ERVL -243 5521 4267 6368 149 28 33 chr5 98844986 98846185 -104239347 + L1MA2 LINE L1 4119 5318 -986 1832 132 31 3 chr5 98846185 98846473 -104239059 + AluSx SINE Alu 1 296 -16 6368 149 28 33 chr5 98846473 98847456 -104238076 + L1MA2 LINE L1 5318 6304 0 2347 107 0 0 chr5 98848664 98848973 -104236559 + AluSg SINE Alu 1 309 -1 342 234 246 42 chr5 98849412 98849579 -104235953 - MIR SINE MIR -2 260 60 26 30 0 0 chr5 98850503 98850536 -104234996 + AT_rich Low_complexity Low_complexity 1 33 0 24 53 0 0 chr5 98851990 98852028 -104233504 + AT_rich Low_complexity Low_complexity 1 38 0 342 98 0 0 chr5 98853203 98853254 -104232278 + (TG)n Simple_repeat Simple_repeat 2 52 0 213 65 0 0 chr5 98853570 98853601 -104231931 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 21 0 0 0 chr5 98854401 98854422 -104231110 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr5 98854543 98854577 -104230955 + AT_rich Low_complexity Low_complexity 1 34 0 989 153 84 0 chr5 98855232 98855422 -104230110 + L1PA16 LINE L1 5951 6156 -10 185 304 0 0 chr5 98856957 98857003 -104228529 - L2 LINE L2 -1 3312 3267 237 146 0 0 chr5 98858025 98858073 -104227459 + (TC)n Simple_repeat Simple_repeat 2 49 0 219 88 0 0 chr5 98858785 98858819 -104226713 + (CA)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr5 98859681 98859703 -104225829 + AT_rich Low_complexity Low_complexity 1 22 0 2262 61 0 0 chr5 98860192 98860472 -104225060 - AluY SINE Alu 0 311 32 26 50 0 0 chr5 98860521 98860561 -104224971 + AT_rich Low_complexity Low_complexity 1 40 0 183 42 0 0 chr5 98860591 98860615 -104224917 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 189 107 0 0 chr5 98860614 98860642 -104224890 + (TG)n Simple_repeat Simple_repeat 1 28 0 207 162 0 0 chr5 98861543 98861580 -104223952 + (TG)n Simple_repeat Simple_repeat 1 37 0 409 368 87 13 chr5 98862749 98862980 -104222552 - MIR SINE MIR 0 262 15 1933 133 4 0 chr5 98863457 98863736 -104221796 + AluSx SINE Alu 1 280 -32 513 32 0 0 chr5 98863737 98863800 -104221732 + (CTAA)n Simple_repeat Simple_repeat 2 64 0 361 138 25 0 chr5 98864340 98864420 -104221112 + (TA)n Simple_repeat Simple_repeat 2 83 0 2260 125 0 0 chr5 98864421 98864733 -104220799 - AluSx SINE Alu 0 312 1 22 0 0 0 chr5 98864882 98864904 -104220628 + AT_rich Low_complexity Low_complexity 1 22 0 * 334 103 17 0 chr5 98864903 98864961 -104220571 - L1MA6 LINE L1 0 6300 6242 688 132 9 0 chr5 98864905 98865019 -104220513 - L1MA6 LINE L1 -2 6298 6184 2599 166 18 6 chr5 98865019 98865524 -104220008 - L1 LINE L1 -1360 4786 4276 539 65 11 53 chr5 98866543 98866649 -104218883 + L1 LINE L1 5240 5341 -805 1914 70 7 29 chr5 98866913 98867186 -104218346 - L1PA10 LINE L1 0 6168 5902 852 226 0 15 chr5 98867288 98867487 -104218045 - L1ME1 LINE L1 -5 6161 5966 273 262 143 0 chr5 98867487 98867571 -104217961 - U6 snRNA snRNA 0 107 12 21 57 0 0 chr5 98868474 98868509 -104217023 + AT_rich Low_complexity Low_complexity 1 35 0 234 297 31 0 chr5 98871045 98871109 -104214423 - MIR3 SINE MIR -34 174 109 603 312 111 15 chr5 98871175 98871499 -104214033 + MLT1J2 LTR MaLR 84 438 -12 1828 108 8 0 chr5 98871858 98872108 -104213424 + AluSp SINE Alu 54 305 -8 423 311 170 9 chr5 98872182 98872394 -104213138 + Charlie8 DNA MER1_type 22 267 -2150 308 170 0 0 chr5 98872394 98872447 -104213085 - Ricksha DNA DNA -1145 901 849 508 229 8 25 chr5 98872500 98872618 -104212914 - MLT2B1 LTR ERVL -66 454 339 900 274 32 16 chr5 98872739 98872987 -104212545 - MIR SINE MIR -10 252 1 278 250 15 0 chr5 98874282 98874350 -104211182 + (TA)n Simple_repeat Simple_repeat 1 69 0 1791 221 99 11 chr5 98874586 98875051 -104210481 + Charlie1a DNA MER1_type 6 511 -944 23 0 0 0 chr5 98875542 98875565 -104209967 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 98877080 98877106 -104208426 + (T)n Simple_repeat Simple_repeat 1 26 0 2024 197 80 88 chr5 98877151 98877800 -104207732 + MLT1E1 LTR MaLR 3 646 -8 1553 140 35 73 chr5 98878038 98878352 -104207180 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 98878557 98878578 -104206954 + AT_rich Low_complexity Low_complexity 1 21 0 656 255 132 56 chr5 98878631 98879148 -104206384 + L1ME4a LINE L1 5545 6100 -21 2169 122 0 19 chr5 98879149 98879468 -104206064 - AluSq SINE Alu 0 313 1 634 300 111 26 chr5 98879654 98880041 -104205491 + Charlie8 DNA MER1_type 2 421 -1996 2440 91 0 0 chr5 98881608 98881937 -104203595 - pTR5 LTR ERV1 -2044 394 66 349 262 10 0 chr5 98881937 98882040 -104203492 - LTR30 LTR ERV1 -80 642 539 4242 138 66 33 chr5 98882040 98883009 -104202523 - pTR5 LTR ERV1 -418 2020 775 279 336 49 62 chr5 98883096 98883322 -104202210 - L2 LINE L2 -181 3091 2869 21 0 0 0 chr5 98883575 98883596 -104201936 + AT_rich Low_complexity Low_complexity 1 21 0 3860 192 28 44 chr5 98883596 98883640 -104201892 - L1MA9 LINE L1 -40 6272 6229 2192 112 0 3 chr5 98883640 98883936 -104201596 + AluSx SINE Alu 1 295 -17 3860 192 28 44 chr5 98883936 98884391 -104201141 - L1MA9 LINE L1 -83 6229 5768 285 29 0 0 chr5 98884391 98884425 -104201107 + (TG)n Simple_repeat Simple_repeat 1 34 0 3860 192 28 44 chr5 98884425 98884609 -104200923 - L1MA9 LINE L1 -544 5768 5583 1591 184 6 41 chr5 98884609 98884925 -104200607 - AluJo SINE Alu -7 305 1 3860 192 28 44 chr5 98884925 98885788 -104199744 - L1MA9 LINE L1 -729 5583 4750 1968 141 3 7 chr5 98885805 98886104 -104199428 - AluSx SINE Alu -14 298 1 24 53 0 0 chr5 98886624 98886662 -104198870 + AT_rich Low_complexity Low_complexity 1 38 0 34 0 0 0 chr5 98887862 98887896 -104197636 + AT_rich Low_complexity Low_complexity 1 34 0 2347 140 33 46 chr5 98888914 98889372 -104196160 - LTR47A LTR ERVL 0 452 1 300 271 73 10 chr5 98890126 98890222 -104195310 + MIR SINE MIR 90 191 -71 24 0 0 0 chr5 98891018 98891042 -104194490 + AT_rich Low_complexity Low_complexity 1 24 0 430 327 90 38 chr5 98891958 98892460 -104193072 + L2 LINE L2 2736 3271 -1 21 0 0 0 chr5 98893008 98893029 -104192503 + AT_rich Low_complexity Low_complexity 1 21 0 216 294 87 22 chr5 98895551 98895643 -104189889 - MER5A DNA MER1_type -38 151 54 185 284 90 0 chr5 98895613 98895680 -104189852 + MER5A DNA MER1_type 117 189 0 * 425 379 111 59 chr5 98896382 98898020 -104187512 + L2 LINE L2 593 2315 -999 549 392 97 14 chr5 98898035 98898409 -104187123 + L2 LINE L2 2568 2910 -362 2288 161 28 35 chr5 98898409 98898838 -104186694 - MSTB LTR MaLR 0 426 1 549 392 97 14 chr5 98898838 98899113 -104186419 + L2 LINE L2 2910 3272 0 503 358 76 51 chr5 98901478 98902006 -104183526 - L2 LINE L2 -557 2757 2217 5558 164 18 14 chr5 98902172 98903921 -104181611 - L1PB3 LINE L1 -3 6151 4395 863 38 0 0 chr5 98903921 98904027 -104181505 - L1PA4 LINE L1 -3 6152 6047 5558 164 18 14 chr5 98904027 98904300 -104181232 - L1PB3 LINE L1 -1759 4395 4125 228 282 87 56 chr5 98904446 98904641 -104180891 - L2 LINE L2 -1139 2175 1975 216 200 0 0 chr5 98906295 98906335 -104179197 + A-rich Low_complexity Low_complexity 2 41 0 34 0 0 0 chr5 98906413 98906447 -104179085 + AT_rich Low_complexity Low_complexity 1 34 0 216 188 62 0 chr5 98907788 98907836 -104177696 - L2 LINE L2 -1 3271 3221 189 74 0 0 chr5 98908744 98908771 -104176761 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 4544 189 38 22 chr5 98908820 98910162 -104175370 - L1MB3 LINE L1 -4 6179 4812 2291 219 147 95 chr5 98910174 98910738 -104174794 - L1MD3 LINE L1 -1 7994 7460 465 225 22 0 chr5 98910738 98910827 -104174705 - MLT1F1 LTR MaLR -442 125 35 2291 219 147 95 chr5 98910827 98911212 -104174320 - L1MD3 LINE L1 -535 7460 6692 27 0 0 0 chr5 98914434 98914461 -104171071 + AT_rich Low_complexity Low_complexity 1 27 0 250 292 8 108 chr5 98914922 98915039 -104170493 + MIR SINE MIR 16 143 -119 711 52 0 10 chr5 98915039 98915135 -104170397 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2121 123 0 0 chr5 98915135 98915420 -104170112 - AluSp SINE Alu -1 380 1 250 292 8 108 chr5 98915420 98915431 -104170101 + MIR SINE MIR 121 132 -130 6220 124 47 3 chr5 98915434 98916395 -104169137 - L1MA4A LINE L1 -8 6295 5290 216 0 0 0 chr5 98916395 98916419 -104169113 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6220 124 47 3 chr5 98916419 98916489 -104169043 - L1MA4A LINE L1 -1013 5290 5225 207 0 0 0 chr5 98916492 98916515 -104169017 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1920 121 0 64 chr5 98916521 98916818 -104168714 - AluSq SINE Alu -35 278 1 23 33 0 0 chr5 98917078 98917108 -104168424 + AT_rich Low_complexity Low_complexity 1 30 0 362 273 73 36 chr5 98918853 98919018 -104166514 - MIR SINE MIR -90 172 2 537 336 23 53 chr5 98920373 98920638 -104164894 - L2 LINE L2 -1 3271 3015 782 337 58 33 chr5 98921142 98921941 -104163591 - L2 LINE L2 -1 3312 2455 248 312 52 0 chr5 98922762 98922839 -104162693 + MIR SINE MIR 63 143 -65 16705 137 105 93 chr5 98922908 98926877 -104158655 + L1P LINE L1 5 4021 -2125 11375 86 1 0 chr5 98926877 98929248 -104156284 + L1PA7 LINE L1 3763 6150 -4 181 257 0 0 chr5 98929374 98929409 -104156123 - L2 LINE L2 -17 3296 3262 24 0 0 0 chr5 98929426 98929450 -104156082 + AT_rich Low_complexity Low_complexity 1 24 0 1500 128 0 14 chr5 98929877 98930095 -104155437 - AluJb SINE Alu -13 299 85 23 54 0 0 chr5 98931123 98931160 -104154372 + AT_rich Low_complexity Low_complexity 1 37 0 29 28 0 0 chr5 98932171 98932207 -104153325 + AT_rich Low_complexity Low_complexity 1 36 0 1697 162 3 35 chr5 98932251 98932566 -104152966 - AluJo SINE Alu -7 305 1 1620 215 38 10 chr5 98933266 98933717 -104151815 - MLT1E1 LTR MaLR -38 616 50 29 0 0 0 chr5 98933771 98933800 -104151732 + AT_rich Low_complexity Low_complexity 1 29 0 369 121 36 0 chr5 98934190 98934273 -104151259 + (TA)n Simple_repeat Simple_repeat 2 87 0 622 271 129 26 chr5 98934304 98934692 -104150840 + L1ME3A LINE L1 5522 5949 -221 30 0 0 0 chr5 98934703 98934733 -104150799 + AT_rich Low_complexity Low_complexity 1 30 0 2046 148 0 6 chr5 98934733 98935044 -104150488 + AluSc SINE Alu 1 309 0 34 0 0 0 chr5 98935233 98935267 -104150265 + AT_rich Low_complexity Low_complexity 1 34 0 238 333 77 34 chr5 98935723 98935840 -104149692 + MIR SINE MIR 30 151 -111 289 279 0 0 chr5 98935844 98935912 -104149620 - L2 LINE L2 -7 3265 3198 693 313 157 35 chr5 98935917 98936432 -104149100 - MLT1K LTR MaLR -8 580 3 189 368 76 28 chr5 98936459 98936747 -104148785 - L2 LINE L2 -92 3221 2920 398 351 66 19 chr5 98936823 98937034 -104148498 - L2 LINE L2 -483 2831 2611 1038 207 14 31 chr5 98937034 98937191 -104148341 + MER20 DNA MER1_type 2 155 -64 2694 109 55 2 chr5 98937191 98937613 -104147919 + MLT2A1 LTR ERVL 1 444 0 1038 207 14 31 chr5 98937613 98937677 -104147855 + MER20 DNA MER1_type 155 219 0 594 311 109 17 chr5 98937799 98938092 -104147440 - L2 LINE L2 -882 2432 2113 3482 189 76 51 chr5 98938623 98939180 -104146352 + L1MC3 LINE L1 6785 7374 -411 1910 49 0 124 chr5 98939180 98939528 -104146004 + AluY SINE Alu 1 305 -6 3482 189 76 51 chr5 98939528 98939870 -104145662 + L1MC3 LINE L1 7374 7706 -79 332 273 110 32 chr5 98940058 98940212 -104145320 + MIR SINE MIR 47 212 -50 1778 128 34 0 chr5 98942806 98943104 -104142428 - L1MA3 LINE L1 -1 6304 5997 1051 162 26 75 chr5 98943799 98944027 -104141505 + MER20 DNA MER1_type 1 217 -2 362 21 21 0 chr5 98944143 98944190 -104141342 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 98944482 98944503 -104141029 + AT_rich Low_complexity Low_complexity 1 21 0 321 26 0 0 chr5 98944513 98944551 -104140981 + (TG)n Simple_repeat Simple_repeat 2 39 0 201 331 39 62 chr5 98945154 98945284 -104140248 + MIR3 SINE MIR 40 166 -42 650 281 105 46 chr5 98945748 98946327 -104139205 + L2 LINE L2 2684 3305 -8 1791 171 4 0 chr5 98946495 98946805 -104138727 - AluJo SINE Alu 0 311 1 23 33 0 0 chr5 98947049 98947079 -104138453 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 98947137 98947168 -104138364 + AT_rich Low_complexity Low_complexity 1 31 0 201 26 79 0 chr5 98947391 98947429 -104138103 + (TA)n Simple_repeat Simple_repeat 1 41 0 4628 29 0 0 chr5 98948937 98949489 -104136043 - L1PA3 LINE L1 -968 5178 4627 * 7691 17 0 0 chr5 98949488 98950436 -104135096 + L1PA3 LINE L1 5185 6132 -23 551 85 12 0 chr5 98950436 98950518 -104135014 + (TAAAG)n Simple_repeat Simple_repeat 3 85 0 619 233 83 59 chr5 98950870 98951123 -104134409 + L2 LINE L2 3040 3298 -15 442 210 61 78 chr5 98951444 98951588 -104133944 - MIR SINE MIR -62 146 5 227 191 0 21 chr5 98952757 98952804 -104132728 + MLT1K LTR MaLR 534 579 -9 2355 101 0 0 chr5 98953259 98953566 -104131966 - AluSc SINE Alu 0 309 3 192 329 29 0 chr5 98953662 98953732 -104131800 + L2 LINE L2 3102 3173 -99 180 0 0 0 chr5 98954529 98954549 -104130983 + (A)n Simple_repeat Simple_repeat 1 20 0 5405 142 30 16 chr5 98955389 98956385 -104129147 - L1MA8 LINE L1 0 7251 6242 1235 161 54 50 chr5 98956385 98956627 -104128905 - AluJo SINE Alu -64 248 6 2940 178 37 13 chr5 98956629 98957246 -104128286 - L1MA8 LINE L1 -886 6220 5589 780 191 17 0 chr5 98957252 98957430 -104128102 - L1MA8 LINE L1 -1743 5363 5183 19834 146 27 8 chr5 98957452 98957777 -104127755 - L1PA8A LINE L1 -35 7515 7197 2117 126 0 22 chr5 98957777 98958094 -104127438 - AluSx SINE Alu -2 310 1 19834 146 27 8 chr5 98958094 98962210 -104123322 - L1PA8A LINE L1 -353 7197 2568 1771 183 3 0 chr5 98962210 98962510 -104123022 - AluSx SINE Alu -9 303 3 19834 146 27 8 chr5 98962510 98962746 -104122786 - L1PA8A LINE L1 -4982 2568 2338 2052 250 59 28 chr5 98962760 98963960 -104121572 - L1MA8 LINE L1 -4567 2470 10 318 318 26 26 chr5 98963968 98964122 -104121410 + MIR SINE MIR 52 205 -57 24 0 0 0 chr5 98964142 98964166 -104121366 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 98964253 98964284 -104121248 + AT_rich Low_complexity Low_complexity 1 31 0 296 272 58 87 chr5 98964424 98964597 -104120935 - MIR SINE MIR -87 175 8 2164 123 0 0 chr5 98965359 98965652 -104119880 + AluSx SINE Alu 1 293 -19 543 290 21 43 chr5 98965983 98966169 -104119363 - MER5A DNA MER1_type -1 188 7 3766 178 98 26 chr5 98966567 98967371 -104118161 + MER21B LTR ERV1 1 862 -1 191 349 18 37 chr5 98970123 98970232 -104115300 + MIR SINE MIR 34 140 -122 430 305 18 0 chr5 98970234 98970398 -104115134 + MER104 DNA Tc2 13 179 -1 852 302 46 33 chr5 99020639 99021030 -104064502 - MLT1I LTR MaLR -13 396 1 247 222 33 11 chr5 99021500 99021590 -104063942 - L1MC4 LINE L1 -1339 6703 6612 256 321 99 38 chr5 99021900 99022031 -104063501 - L2 LINE L2 -2 3270 3132 316 320 0 0 chr5 99022081 99022159 -104063373 + L2 LINE L2 2985 3062 -210 1439 103 70 0 chr5 99023238 99023452 -104062080 + MER30 DNA MER1_type 2 230 0 21 36 0 0 chr5 99023863 99023891 -104061641 + AT_rich Low_complexity Low_complexity 1 28 0 589 283 50 0 chr5 99024202 99024400 -104061132 + LTR55 LTR ERV 1 208 -340 281 298 19 0 chr5 99025127 99025231 -104060301 + (TG)n Simple_repeat Simple_repeat 2 107 0 21 0 0 0 chr5 99025880 99025901 -104059631 + AT_rich Low_complexity Low_complexity 1 21 0 467 133 0 12 chr5 99027976 99028059 -104057473 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 808 228 228 35 chr5 99029273 99029650 -104055882 - MLT1J2 LTR MaLR 0 450 1 251 163 0 0 chr5 99030301 99030344 -104055188 + MIR SINE MIR 104 146 -116 243 0 0 0 chr5 99030541 99030568 -104054964 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 213 159 0 0 chr5 99030576 99030620 -104054912 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 27 29 0 0 chr5 99031065 99031099 -104054433 + AT_rich Low_complexity Low_complexity 1 34 0 1541 207 55 25 chr5 99031184 99031547 -104053985 - MLT1B LTR MaLR -16 374 1 604 251 6 69 chr5 99032499 99032674 -104052858 - MER91A DNA MER1_type 0 196 33 225 175 0 25 chr5 99033239 99033279 -104052253 - MER45C DNA AcHobo 0 953 915 570 308 84 5 chr5 99033297 99033511 -104052021 - MER45C DNA AcHobo -333 620 390 325 341 8 16 chr5 99033751 99033874 -104051658 - L2 LINE L2 -5 3308 3187 330 252 47 28 chr5 99034842 99034949 -104050583 + L2 LINE L2 3192 3300 -13 23 0 0 0 chr5 99034950 99034973 -104050559 + AT_rich Low_complexity Low_complexity 1 23 0 515 265 123 23 chr5 99035052 99035271 -104050261 + MIR SINE MIR 15 255 -7 190 314 98 29 chr5 99037221 99037323 -104048209 - MIR SINE MIR -66 142 34 458 330 102 10 chr5 99039254 99039460 -104046072 - MIR SINE MIR -33 229 5 1109 194 75 109 chr5 99039721 99040123 -104045409 + MLT1B LTR MaLR 1 388 -2 1199 81 0 0 chr5 99040661 99040821 -104044711 + L1PA7 LINE L1 5995 6154 0 405 186 175 62 chr5 99042201 99042378 -104043154 - MARNA DNA Mariner -62 524 328 273 292 135 0 chr5 99042388 99042477 -104043055 - L2 LINE L2 -4 3268 3168 296 297 200 13 chr5 99042477 99042632 -104042900 - MARNA DNA Mariner -271 315 132 351 0 0 0 chr5 99043696 99043735 -104041797 + (CA)n Simple_repeat Simple_repeat 1 39 0 342 0 0 0 chr5 99045259 99045297 -104040235 + (CA)n Simple_repeat Simple_repeat 2 39 0 197 304 29 29 chr5 99045475 99045544 -104039988 + L3 LINE CR1 1504 1572 -5 297 0 0 0 chr5 99045638 99045671 -104039861 + (CA)n Simple_repeat Simple_repeat 1 33 0 201 176 0 0 chr5 99048557 99048591 -104036941 + A-rich Low_complexity Low_complexity 1 34 0 810 261 30 26 chr5 99049069 99049303 -104036229 - MIR SINE MIR -26 236 2 181 388 109 15 chr5 99049813 99050014 -104035518 - L2 LINE L2 -249 3023 2804 288 282 88 55 chr5 99050199 99050380 -104035152 - MIR SINE MIR -75 187 1 209 356 72 50 chr5 99050825 99051005 -104034527 + L2 LINE L2 2682 2865 -449 * 215 292 46 0 chr5 99050982 99051047 -104034485 + L2 LINE L2 3246 3313 0 202 226 38 0 chr5 99052008 99052061 -104033471 + GA-rich Low_complexity Low_complexity 5 59 0 208 304 54 0 chr5 99052231 99052287 -104033245 - L2 LINE L2 -1 3312 3254 2377 87 0 7 chr5 99052336 99052645 -104032887 - AluSg1 SINE Alu -2 307 1 230 406 5 39 chr5 99053553 99053760 -104031772 + MIR3 SINE MIR 2 201 -7 262 293 61 0 chr5 99053900 99053982 -104031550 + L2 LINE L2 3185 3271 -1 467 296 148 0 chr5 99054063 99054266 -104031266 + MIR SINE MIR 16 248 -14 234 0 0 0 chr5 99057452 99057478 -104028054 + (T)n Simple_repeat Simple_repeat 1 26 0 304 334 97 74 chr5 99058095 99058615 -104026917 + L2 LINE L2 2742 3272 0 187 385 8 34 chr5 99059122 99059239 -104026293 + MIR SINE MIR 36 149 -59 402 351 75 31 chr5 99059316 99059703 -104025829 + MLT1J2 LTR MaLR 21 424 -22 23 0 0 0 chr5 99059902 99059925 -104025607 + AT_rich Low_complexity Low_complexity 1 23 0 234 296 56 14 chr5 99059940 99060011 -104025521 - MER91 DNA MER1_type 0 190 123 312 313 204 0 chr5 99060813 99060989 -104024543 - MIR SINE MIR -45 217 6 1974 46 0 0 chr5 99061628 99061867 -104023665 - L1PA5 LINE L1 -7 6147 5909 1873 177 28 25 chr5 99061959 99062321 -104023211 + MLT1A1 LTR MaLR 1 363 -2 392 270 0 20 chr5 99062469 99062569 -104022963 - MER94 DNA DNA -2 132 35 1022 279 74 45 chr5 99062895 99063383 -104022149 + MLT1J LTR MaLR 6 507 -4 311 143 0 14 chr5 99066623 99066693 -104018839 + (TC)n Simple_repeat Simple_repeat 2 70 0 383 350 21 31 chr5 99068180 99068374 -104017158 + MIR3 SINE MIR 12 203 -5 1938 144 3 3 chr5 99069468 99069767 -104015765 + AluSx SINE Alu 1 299 -13 597 310 135 21 chr5 99071817 99072201 -104013331 - LTR33 LTR ERVL 0 521 94 905 156 16 21 chr5 99072802 99072815 -104012717 + L1MA10 LINE L1 6144 6156 -178 327 65 0 0 chr5 99072815 99072861 -104012671 + (CA)n Simple_repeat Simple_repeat 2 47 0 905 156 16 21 chr5 99072861 99073039 -104012493 + L1MA10 LINE L1 6156 6334 0 450 333 30 0 chr5 99073257 99073389 -104012143 - L2 LINE L2 0 3272 3137 295 243 19 84 chr5 99078223 99078330 -104007202 - L2 LINE L2 0 3272 3173 589 231 48 29 chr5 99079180 99079351 -104006181 - MER69A DNA AcHobo -2 175 2 189 121 0 0 chr5 99079437 99079470 -104006062 + (TC)n Simple_repeat Simple_repeat 1 33 0 4988 56 3 5 chr5 99080246 99080887 -104004645 - L1PA7 LINE L1 -12 6142 5503 316 339 63 0 chr5 99081007 99081134 -104004398 + L2 LINE L2 3138 3272 0 789 144 8 0 chr5 99081283 99081408 -104004124 - L1MA8 LINE L1 -342 5949 5824 * 1164 157 147 27 chr5 99081406 99081705 -104003827 + L1MA8 LINE L1 5949 6283 -8 25 0 0 0 chr5 99081786 99081811 -104003721 + AT_rich Low_complexity Low_complexity 1 25 0 256 83 0 0 chr5 99082937 99082973 -104002559 - L1ME LINE L1 -340 5826 5791 * 272 61 0 102 chr5 99082941 99082990 -104002542 - L1P5 LINE L1 -326 5825 5782 350 121 34 54 chr5 99082990 99083139 -104002393 + (TA)n Simple_repeat Simple_repeat 1 146 0 393 102 0 0 chr5 99083151 99083210 -104002322 + (TG)n Simple_repeat Simple_repeat 2 60 0 2175 136 3 21 chr5 99083282 99083657 -104001875 - L1PB1 LINE L1 -2 6149 5782 401 107 25 123 chr5 99083686 99084220 -104001312 + (TA)n Simple_repeat Simple_repeat 1 481 0 237 109 38 82 chr5 99084244 99084428 -104001104 + (TA)n Simple_repeat Simple_repeat 2 177 0 390 148 35 35 chr5 99084506 99084675 -104000857 + (TA)n Simple_repeat Simple_repeat 1 169 0 873 110 4 12 chr5 99084675 99084818 -104000714 - L1ME LINE L1 -360 5791 5652 895 230 40 28 chr5 99086294 99086546 -103998986 + MIR SINE MIR 8 262 0 653 184 144 90 chr5 99089039 99089240 -103996292 + AluJo SINE Alu 1 212 -100 2812 76 3 0 chr5 99089454 99089822 -103995710 - L1PA7 LINE L1 -8 6146 5778 210 221 12 47 chr5 99090115 99090201 -103995331 + A-rich Low_complexity Low_complexity 2 84 0 207 203 0 0 chr5 99090217 99090281 -103995251 + A-rich Low_complexity Low_complexity 1 64 0 191 189 21 32 chr5 99090453 99090548 -103994984 + CT-rich Low_complexity Low_complexity 1 94 0 286 330 10 20 chr5 99091417 99091517 -103994015 - MER5A DNA MER1_type -32 157 59 534 305 48 17 chr5 99091707 99091903 -103993629 - LTR33 LTR ERVL -301 220 45 2031 73 3 21 chr5 99091966 99092253 -103993279 - AluY SINE Alu 0 311 30 187 125 25 50 chr5 99092296 99092336 -103993196 - MER5B DNA MER1_type -139 39 1 281 309 118 7 chr5 99092388 99092524 -103993008 - MIR3 SINE MIR -15 193 43 215 254 0 30 chr5 99093035 99093102 -103992430 + MER5B DNA MER1_type 114 178 0 314 295 128 60 chr5 99095583 99095817 -103989715 - MLT1J LTR MaLR -261 250 1 182 390 108 18 chr5 99096517 99096914 -103988618 + L2 LINE L2 2412 2844 -470 1912 132 14 0 chr5 99097122 99097417 -103988115 + AluSx SINE Alu 1 299 -13 1987 168 10 22 chr5 99098096 99098502 -103987030 - L1MA7 LINE L1 -1 6290 5890 2071 113 0 3 chr5 99099621 99099933 -103985599 - AluSx SINE Alu 0 311 1 1152 206 5 0 chr5 99099942 99100165 -103985367 - L1PA16 LINE L1 -21 6145 5922 23 0 0 0 chr5 99100422 99100445 -103985087 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr5 99101023 99101060 -103984472 + AT_rich Low_complexity Low_complexity 1 37 0 457 273 108 67 chr5 99101148 99101466 -103984066 - L1MC4a LINE L1 -253 5868 5538 225 133 40 13 chr5 99101475 99101550 -103983982 + (TCTA)n Simple_repeat Simple_repeat 1 77 0 315 0 0 0 chr5 99102480 99102515 -103983017 + (CA)n Simple_repeat Simple_repeat 1 35 0 2427 113 39 55 chr5 99102591 99102832 -103982700 - MSTA LTR MaLR 0 428 196 2550 38 3 10 chr5 99102832 99103145 -103982387 - AluY SINE Alu 0 311 1 2427 113 39 55 chr5 99103145 99103338 -103982194 - MSTA LTR MaLR -232 196 1 581 258 81 10 chr5 99103496 99103705 -103981827 + MER113 DNA MER1_type? 85 308 -213 250 336 0 35 chr5 99105077 99105193 -103980339 - L2 LINE L2 -1 3312 3201 * 286 320 76 80 chr5 99105160 99105410 -103980122 + MIR SINE MIR 11 259 -3 245 312 52 45 chr5 99105514 99105668 -103979864 - L2 LINE L2 -153 3119 2965 198 0 0 0 chr5 99105750 99105772 -103979760 + (TTA)n Simple_repeat Simple_repeat 3 24 0 3019 68 0 0 chr5 99105775 99106160 -103979372 - L1PA7 LINE L1 -21 6133 5749 * 3798 67 4 0 chr5 99106155 99106898 -103978634 + L1PA7 LINE L1 4994 5738 -416 185 62 0 31 chr5 99107589 99107621 -103977911 + (TA)n Simple_repeat Simple_repeat 1 31 0 24 32 0 0 chr5 99107727 99107758 -103977774 + AT_rich Low_complexity Low_complexity 1 31 0 294 73 0 0 chr5 99107760 99107801 -103977731 + (CCCTAA)n Simple_repeat Simple_repeat 2 42 0 418 236 162 14 chr5 99108304 99108452 -103977080 + MER104 DNA Tc2 10 179 -1 374 294 137 15 chr5 99108491 99108688 -103976844 - HAL1 LINE L1 -851 1656 1436 200 374 42 33 chr5 99108868 99109082 -103976450 - L2 LINE L2 -2569 745 530 21 36 0 0 chr5 99109324 99109352 -103976180 + AT_rich Low_complexity Low_complexity 1 28 0 3115 216 0 6 chr5 99110842 99111501 -103974031 + L1P LINE L1 4492 5146 -1000 629 167 0 0 chr5 99111501 99111608 -103973924 + L1PA16 LINE L1 6050 6157 -9 1093 298 28 23 chr5 99112467 99112896 -103972636 + LTR16B LTR ERVL 34 464 0 201 293 131 20 chr5 99114120 99114219 -103971313 + L2 LINE L2 3204 3313 0 300 296 49 44 chr5 99115067 99115270 -103970262 - MIR SINE MIR -2 260 57 21 0 0 0 chr5 99115271 99115292 -103970240 + AT_rich Low_complexity Low_complexity 1 21 0 217 333 69 35 chr5 99118270 99118357 -103967175 - MIR SINE MIR -147 115 26 261 231 0 0 chr5 99118544 99118596 -103966936 + MER103 DNA DNA 69 120 -46 22 35 0 0 chr5 99118742 99118771 -103966761 + AT_rich Low_complexity Low_complexity 1 29 0 311 328 103 62 chr5 99119706 99119996 -103965536 - L2 LINE L2 -132 3140 2839 307 341 11 0 chr5 99120188 99120276 -103965256 + L2 LINE L2 3189 3277 -36 276 100 0 0 chr5 99120321 99120361 -103965171 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 197 330 71 35 chr5 99120485 99120682 -103964850 - L2 LINE L2 -1194 2120 1917 677 265 46 23 chr5 99120688 99120907 -103964625 - L1ME2 LINE L1 0 6164 5941 627 304 72 77 chr5 99121015 99121209 -103964323 - L1MEc LINE L1 -5288 1108 914 2272 103 3 0 chr5 99121209 99121510 -103964022 - AluY SINE Alu -9 302 1 627 304 72 77 chr5 99121510 99122221 -103963311 - L1MEc LINE L1 -5482 914 208 1543 86 209 0 chr5 99122255 99122504 -103963028 + L1P5 LINE L1 5464 5763 -388 212 254 0 18 chr5 99122887 99122942 -103962590 + GA-rich Low_complexity Low_complexity 1 54 0 1761 92 0 4 chr5 99123046 99123274 -103962258 - AluY SINE Alu -81 230 4 299 277 127 66 chr5 99123442 99123929 -103961603 - L1MEc LINE L1 -5577 819 303 225 0 0 0 chr5 99123929 99123954 -103961578 + (T)n Simple_repeat Simple_repeat 1 25 0 3615 76 17 1 chr5 99124068 99124245 -103961287 + L1PA12 LINE L1 5452 5625 -543 3615 61 21 0 chr5 99124245 99124720 -103960812 + L1PA12 LINE L1 5684 6168 0 3615 76 17 1 chr5 99124720 99124737 -103960795 + L1PA12 LINE L1 5625 6168 0 398 210 75 113 chr5 99126971 99127157 -103958375 + MIR SINE MIR 71 249 -13 256 363 35 108 chr5 99127228 99127423 -103958109 + L2 LINE L2 2954 3115 -157 1493 228 20 36 chr5 99127423 99127866 -103957666 + MER63B DNA MER1_type 1 436 0 256 363 35 108 chr5 99127866 99128014 -103957518 + L2 LINE L2 3115 3272 0 635 306 73 9 chr5 99128292 99128511 -103957021 - MIR SINE MIR -1 261 29 2718 255 55 46 chr5 99130368 99131114 -103954418 + L1MC/D LINE L1 782 1512 -4894 2360 70 0 0 chr5 99131114 99131398 -103954134 + AluY SINE Alu 1 284 -27 2718 255 55 46 chr5 99131398 99131978 -103953554 + L1MC/D LINE L1 1512 2085 -4321 876 160 0 0 chr5 99131986 99132117 -103953415 + AluSq/x SINE Alu 1 131 -181 514 239 29 90 chr5 99132155 99132267 -103953265 + MLT2B1 LTR ERVL 266 308 -212 1642 207 13 40 chr5 99132267 99132643 -103952889 - MLT1A2 LTR MaLR -4 370 5 514 239 29 90 chr5 99132643 99132757 -103952775 + MLT2B1 LTR ERVL 308 427 -93 1104 260 8 67 chr5 99132796 99132856 -103952676 + L1MC/D LINE L1 2492 2554 -3852 2099 135 0 0 chr5 99132856 99133159 -103952373 + AluSg SINE Alu 1 303 -7 1104 260 8 67 chr5 99133159 99133579 -103951953 + L1MC/D LINE L1 2554 2944 -3462 1244 223 35 7 chr5 99133579 99133745 -103951787 - AluJo SINE Alu -16 296 117 180 0 0 0 chr5 99133745 99133765 -103951767 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1244 223 35 7 chr5 99133765 99133881 -103951651 - AluJo SINE Alu -195 117 6 4443 259 74 48 chr5 99133885 99136013 -103949519 + L1MC/D LINE L1 2935 5117 -1289 1191 245 7 0 chr5 99136025 99136303 -103949229 - L1MB7 LINE L1 -9 6175 5896 1237 164 26 0 chr5 99136309 99136540 -103948992 + L1MD1 LINE L1 6006 6242 0 736 274 80 0 chr5 99136569 99136770 -103948762 - MER20 DNA MER1_type -2 217 1 899 262 14 0 chr5 99137427 99137637 -103947895 + MER58A DNA MER1_type 2 214 -10 215 245 19 0 chr5 99137720 99137773 -103947759 + GA-rich Low_complexity Low_complexity 2 55 0 262 296 155 36 chr5 99139569 99140117 -103945415 + L1MC/D LINE L1 5518 6130 -2172 372 236 110 16 chr5 99141421 99141548 -103943984 - MLT1E1 LTR MaLR -381 273 135 472 284 63 96 chr5 99142354 99142688 -103942844 - LTR16A1 LTR ERVL 0 457 135 1879 147 83 3 chr5 99143126 99143438 -103942094 - MER1B DNA MER1_type 0 337 1 358 196 36 23 chr5 99143591 99143694 -103941838 + MLT1E3 LTR MaLR 64 192 -432 * 866 253 15 15 chr5 99143689 99143891 -103941641 + MLT1E2 LTR MaLR 425 626 0 1325 217 43 89 chr5 99143936 99144465 -103941067 - MLT1D LTR MaLR 0 505 1 4273 214 44 13 chr5 99144478 99145603 -103939929 + L1MA6 LINE L1 2456 3615 -2531 * 5383 158 24 32 chr5 99145602 99147393 -103938139 + L1MA6 LINE L1 4527 6300 0 185 0 0 39 chr5 99147581 99147607 -103937925 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 226 337 42 11 chr5 99147791 99147886 -103937646 - L2 LINE L2 -32 3240 3143 686 225 6 0 chr5 99148543 99148716 -103936816 + CT-rich Low_complexity Low_complexity 4 177 0 284 0 0 27 chr5 99150010 99150047 -103935485 + (TA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 99152328 99152349 -103933183 + AT_rich Low_complexity Low_complexity 1 21 0 192 329 24 24 chr5 99155351 99155436 -103930096 - L2 LINE L2 -50 3263 3179 200 322 128 38 chr5 99155546 99155757 -103929775 - MIR SINE MIR -29 233 4 * 213 357 0 0 chr5 99155724 99155780 -103929752 - L2 LINE L2 -10 3262 3207 235 346 132 17 chr5 99156366 99156655 -103928877 + L2 LINE L2 803 1124 -2190 495 349 89 26 chr5 99156853 99157357 -103928175 + L2 LINE L2 1535 2070 -1244 2115 131 123 5 chr5 99158612 99158993 -103926539 + MSTA LTR MaLR 1 426 -2 910 274 31 9 chr5 99159259 99159576 -103925956 - L1ME3A LINE L1 -213 5957 5634 243 21 85 43 chr5 99159581 99159628 -103925904 + LTR66 LTR ERVL 390 438 -172 303 188 0 16 chr5 99159631 99159695 -103925837 + L1MC4 LINE L1 6641 6703 -1339 443 280 115 22 chr5 99160796 99160978 -103924554 + MIR SINE MIR 18 216 -46 202 205 0 0 chr5 99161354 99161393 -103924139 + (TATG)n Simple_repeat Simple_repeat 4 42 0 249 244 89 140 chr5 99161679 99162557 -103922975 + L1ME3A LINE L1 2336 3168 -2978 784 281 109 33 chr5 99162627 99164164 -103921368 + L1ME3A LINE L1 4097 5951 -219 1099 246 29 58 chr5 99165053 99165399 -103920133 + MLT1E1 LTR MaLR 312 647 -7 1309 132 21 30 chr5 99166864 99167099 -103918433 - L1MA9 LINE L1 -25 6287 6055 241 262 92 3 chr5 99167453 99167585 -103917947 - MER5A DNA MER1_type 0 189 4 512 344 28 6 chr5 99168188 99168368 -103917164 - MIR SINE MIR -30 232 49 213 269 154 0 chr5 99168969 99169047 -103916485 - L2 LINE L2 0 3313 3224 301 341 143 12 chr5 99171771 99172178 -103913354 + L2 LINE L2 2271 2730 -584 21 57 0 0 chr5 99173378 99173413 -103912119 + AT_rich Low_complexity Low_complexity 1 35 0 3799 196 19 8 chr5 99173967 99174741 -103910791 - L1MA10 LINE L1 -21 6313 5531 21 36 0 0 chr5 99175301 99175329 -103910203 + AT_rich Low_complexity Low_complexity 1 28 0 242 313 61 35 chr5 99176250 99176365 -103909167 - L2 LINE L2 -4 3268 3151 22 70 0 0 chr5 99176912 99176955 -103908577 + AT_rich Low_complexity Low_complexity 1 43 0 694 214 49 126 chr5 99176991 99177341 -103908191 - MLT1G LTR MaLR -30 560 238 227 387 24 0 chr5 99177652 99177776 -103907756 - MLT1-int LTR MaLR -503 868 742 238 346 73 10 chr5 99178107 99178312 -103907220 - MLT1-int LTR MaLR -826 545 328 1409 279 174 13 chr5 99178348 99178889 -103906643 - MLT2E LTR ERVL 0 628 1 600 257 31 71 chr5 99179076 99179119 -103906413 + MIR SINE MIR 8 51 -211 2435 54 0 3 chr5 99179119 99179414 -103906118 - AluY SINE Alu -17 294 1 600 257 31 71 chr5 99179414 99179533 -103905999 + MIR SINE MIR 51 161 -101 1738 214 54 44 chr5 99179533 99180033 -103905499 + MLT1D LTR MaLR 1 505 0 600 257 31 71 chr5 99180033 99180095 -103905437 + MIR SINE MIR 161 224 -38 407 216 0 11 chr5 99180095 99180183 -103905349 + MIR SINE MIR 165 251 -11 286 183 17 0 chr5 99180191 99180251 -103905281 + L1MA8 LINE L1 6206 6266 -25 186 103 0 0 chr5 99180286 99180315 -103905217 + (TA)n Simple_repeat Simple_repeat 1 29 0 249 308 11 44 chr5 99180384 99180475 -103905057 + L2 LINE L2 3216 3303 -10 616 276 26 17 chr5 99180479 99180708 -103904824 - L1ME LINE L1 -440 5681 5486 26 64 0 0 chr5 99181839 99181886 -103903646 + AT_rich Low_complexity Low_complexity 1 47 0 29 28 0 0 chr5 99182489 99182525 -103903007 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 99182574 99182595 -103902937 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 99183623 99183653 -103901879 + AT_rich Low_complexity Low_complexity 1 30 0 185 224 0 20 chr5 99185253 99185302 -103900230 - L2 LINE L2 -4 3309 3262 271 311 25 8 chr5 99185449 99185568 -103899964 + (CATA)n Simple_repeat Simple_repeat 2 122 0 375 23 0 0 chr5 99185593 99185637 -103899895 + (CA)n Simple_repeat Simple_repeat 2 45 0 298 307 92 12 chr5 99185667 99185830 -103899702 + MIR SINE MIR 87 262 0 32 57 0 0 chr5 99186232 99186285 -103899247 + AT_rich Low_complexity Low_complexity 1 53 0 378 42 0 0 chr5 99186605 99186653 -103898879 + (TG)n Simple_repeat Simple_repeat 2 49 0 207 283 208 8 chr5 99188760 99188880 -103896652 + MIR SINE MIR 82 225 -37 317 349 19 73 chr5 99189945 99190463 -103895069 - MLT1J LTR MaLR -19 492 3 227 383 21 11 chr5 99190938 99191032 -103894500 + L2 LINE L2 3160 3254 -18 380 210 102 42 chr5 99192503 99192670 -103892862 - L1MC5 LINE L1 -421 7540 7364 2038 99 80 52 chr5 99192699 99193064 -103892468 + THE1C LTR MaLR 1 375 0 9956 131 31 8 chr5 99193064 99194603 -103890929 + THE1C-int LTR MaLR 1 1575 -5 2206 139 39 3 chr5 99194608 99194968 -103890564 + THE1C LTR MaLR 1 373 -2 357 221 48 91 chr5 99194968 99195176 -103890356 - L1MC5 LINE L1 -631 7330 7132 24 53 0 0 chr5 99196430 99196468 -103889064 + AT_rich Low_complexity Low_complexity 1 38 0 1450 157 0 25 chr5 99197561 99197796 -103887736 - AluSx SINE Alu -52 260 32 2261 104 0 3 chr5 99197804 99198101 -103887431 - AluSc SINE Alu -13 296 1 2504 186 8 2 chr5 99198360 99198843 -103886689 - L1PB2 LINE L1 -1953 4193 3708 * 5851 166 31 8 chr5 99198842 99200741 -103884791 + L1PB2 LINE L1 4208 6151 0 210 177 97 32 chr5 99200934 99200996 -103884536 + L2 LINE L2 2690 2755 -559 562 268 134 35 chr5 99201537 99201798 -103883734 - MLT1I LTR MaLR -23 386 100 23 33 0 0 chr5 99202377 99202407 -103883125 + AT_rich Low_complexity Low_complexity 1 30 0 214 211 0 19 chr5 99203889 99203941 -103881591 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 382 170 58 15 chr5 99203972 99204086 -103881446 + L1MD3 LINE L1 6837 6970 -835 1440 216 76 46 chr5 99204091 99204526 -103881006 - MLT1C LTR MaLR -1 466 19 2566 196 23 78 chr5 99204541 99205401 -103880131 + L1MD3 LINE L1 6962 7995 0 2106 128 0 0 chr5 99205609 99205897 -103879635 - AluSx SINE Alu -24 288 1 25 51 0 0 chr5 99206862 99206901 -103878631 + AT_rich Low_complexity Low_complexity 1 39 0 29 0 0 0 chr5 99208116 99208145 -103877387 + AT_rich Low_complexity Low_complexity 1 29 0 892 177 63 0 chr5 99208530 99208705 -103876827 + L1PA16 LINE L1 5972 6157 -9 408 20 0 0 chr5 99209104 99209153 -103876379 + (CA)n Simple_repeat Simple_repeat 1 49 0 245 330 0 0 chr5 99209422 99209525 -103876007 + HAL1 LINE L1 811 913 -1594 256 286 158 44 chr5 99209565 99209838 -103875694 - L2 LINE L2 -571 2743 2440 225 247 35 0 chr5 99210178 99210263 -103875269 + (TA)n Simple_repeat Simple_repeat 1 88 0 218 359 19 39 chr5 99211218 99211374 -103874158 - MIR SINE MIR -47 215 63 231 264 0 0 chr5 99212735 99212788 -103872744 + GA-rich Low_complexity Low_complexity 1 53 0 1007 290 51 28 chr5 99214916 99215271 -103870261 + MLT1I LTR MaLR 41 403 -6 297 0 0 0 chr5 99215594 99215627 -103869905 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 94 0 0 chr5 99216575 99216639 -103868893 + AT_rich Low_complexity Low_complexity 1 64 0 349 350 74 15 chr5 99217156 99217359 -103868173 - MIR SINE MIR -11 251 37 21 36 0 0 chr5 99217418 99217446 -103868086 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr5 99218486 99218533 -103866999 + AT_rich Low_complexity Low_complexity 1 47 0 233 228 18 0 chr5 99219877 99219934 -103865598 + (CA)n Simple_repeat Simple_repeat 2 59 0 347 246 8 0 chr5 99226962 99227088 -103858444 + (TA)n Simple_repeat Simple_repeat 1 127 0 276 306 118 0 chr5 99227951 99228036 -103857496 + MIR3 SINE MIR 89 183 -25 2072 145 0 16 chr5 99229088 99229405 -103856127 + AluSx SINE Alu 1 312 0 207 0 0 0 chr5 99229725 99229748 -103855784 + (TG)n Simple_repeat Simple_repeat 2 24 0 739 202 0 0 chr5 99229929 99230058 -103855474 + FLAM_C SINE Alu 1 129 -4 300 91 0 0 chr5 99231306 99231350 -103854182 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 2041 133 0 3 chr5 99231477 99231788 -103853744 + AluSq SINE Alu 1 310 0 1514 234 22 8 chr5 99231933 99232301 -103853231 + MLT1A2 LTR MaLR 1 373 -1 365 274 69 46 chr5 99232599 99232774 -103852758 - MIR SINE MIR 0 262 84 276 111 0 0 chr5 99234716 99234761 -103850771 + (TC)n Simple_repeat Simple_repeat 2 46 0 850 289 45 24 chr5 99236200 99236491 -103849041 - MLT1G LTR MaLR -27 563 267 5469 163 28 7 chr5 99236517 99237805 -103847727 + L1PB4 LINE L1 4843 6153 -3 682 273 45 21 chr5 99237853 99238095 -103847437 - MLT1G LTR MaLR -343 252 5 373 351 48 0 chr5 99238265 99238433 -103847099 + MIR SINE MIR 31 206 -56 212 59 29 0 chr5 99238806 99238840 -103846692 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 280 375 82 22 chr5 99238963 99239120 -103846412 - L2 LINE L2 0 3272 3095 1467 66 0 5 chr5 99239120 99239318 -103846214 + L1MA1 LINE L1 6103 6299 -3 280 375 82 22 chr5 99239318 99239392 -103846140 - L2 LINE L2 -177 3095 3027 1259 259 113 5 chr5 99239563 99239961 -103845571 + LTR16A LTR ERVL 10 450 0 22 35 0 0 chr5 99240341 99240370 -103845162 + AT_rich Low_complexity Low_complexity 1 29 0 362 298 57 0 chr5 99240829 99240953 -103844579 - MIR SINE MIR 0 262 132 258 199 23 76 chr5 99247447 99247618 -103837914 + (CACAA)n Simple_repeat Simple_repeat 2 163 0 436 158 61 9 chr5 99255818 99255932 -103829600 + THE1-int LTR MaLR 158 277 -1303 32 26 0 0 chr5 99256830 99256869 -103828663 + AT_rich Low_complexity Low_complexity 1 39 0 473 218 77 47 chr5 99257113 99257283 -103828249 - MLT1G LTR MaLR -6 584 410 264 317 0 0 chr5 99257338 99257420 -103828112 - MLT1H LTR MaLR -293 297 216 276 226 172 0 chr5 99257461 99257554 -103827978 - MLT1H LTR MaLR -355 194 86 24 0 0 0 chr5 99257902 99257926 -103827606 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 99258096 99258118 -103827414 + AT_rich Low_complexity Low_complexity 1 22 0 303 85 0 0 chr5 99259244 99259291 -103826241 + (T)n Simple_repeat Simple_repeat 1 47 0 200 250 18 0 chr5 99260073 99260129 -103825403 + (TA)n Simple_repeat Simple_repeat 2 58 0 434 34 34 0 chr5 99261932 99261991 -103823541 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 259 319 16 12 chr5 99262005 99262167 -103823365 + CT-rich Low_complexity Low_complexity 2 249 0 1708 130 31 10 chr5 99262480 99262772 -103822760 - AluY SINE Alu -13 298 1 216 152 0 65 chr5 99262866 99262912 -103822620 - L2 LINE L2 -1 3312 3270 369 250 31 19 chr5 99263456 99263612 -103821920 - L1MC/D LINE L1 -309 5812 5672 2252 105 3 3 chr5 99263641 99263945 -103821587 - AluSc SINE Alu -5 304 1 760 223 97 10 chr5 99264101 99264307 -103821225 + MIR SINE MIR 37 260 -2 23 78 0 0 chr5 99264430 99264481 -103821051 + AT_rich Low_complexity Low_complexity 1 51 0 312 234 56 19 chr5 99264597 99264704 -103820828 + L1MC4a LINE L1 5568 5678 -443 228 35 0 0 chr5 99265276 99265305 -103820227 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1001 133 18 24 chr5 99265954 99266119 -103819413 - THE1B LTR MaLR 0 364 201 3657 104 51 0 chr5 99266119 99266688 -103818844 - THE1-int LTR MaLR -790 790 193 189 74 0 0 chr5 99268331 99268358 -103817174 + (TG)n Simple_repeat Simple_repeat 2 28 0 592 93 0 54 chr5 99269358 99269487 -103816045 + (GAAA)n Simple_repeat Simple_repeat 2 123 0 391 306 57 0 chr5 99269939 99270063 -103815469 - MIR SINE MIR 0 262 132 23 0 0 0 chr5 99271836 99271859 -103813673 + AT_rich Low_complexity Low_complexity 1 23 0 1984 116 9 31 chr5 99272387 99272706 -103812826 + AluSx SINE Alu 1 312 0 190 261 43 72 chr5 99272727 99272796 -103812736 - MIR SINE MIR -190 72 6 405 240 51 40 chr5 99272865 99273040 -103812492 - L1MC/D LINE L1 -417 5704 5528 23 78 0 0 chr5 99273124 99273175 -103812357 + AT_rich Low_complexity Low_complexity 1 51 0 760 223 97 10 chr5 99273307 99273513 -103812019 - MIR SINE MIR -2 260 37 2328 104 0 3 chr5 99273669 99273977 -103811555 + AluSc SINE Alu 1 307 -2 407 237 19 16 chr5 99274009 99274165 -103811367 + L1MC4a LINE L1 5673 5812 -309 216 152 0 65 chr5 99274713 99274759 -103810773 + L2 LINE L2 3270 3312 -1 2082 129 0 7 chr5 99274854 99275157 -103810375 + AluY SINE Alu 1 301 -10 336 276 95 17 chr5 99275203 99275319 -103810213 + L2 LINE L2 3189 3313 0 377 318 0 58 chr5 99275381 99275535 -103809997 - MIR SINE MIR -93 169 25 275 246 172 75 chr5 99275641 99275775 -103809757 - L2 LINE L2 0 3313 3167 191 271 19 65 chr5 99275911 99276018 -103809514 - L2 LINE L2 -337 2935 2834 282 263 26 0 chr5 99276279 99276355 -103809177 + L3b LINE CR1 1392 1469 -114 234 0 0 0 chr5 99276969 99276995 -103808537 + (TA)n Simple_repeat Simple_repeat 2 27 0 444 285 40 40 chr5 99277041 99277241 -103808291 + MIR SINE MIR 13 212 -50 1222 211 67 21 chr5 99277666 99277950 -103807582 - AluJb SINE Alu -5 297 1 2080 128 0 0 chr5 99278894 99279204 -103806328 - AluSc SINE Alu 0 310 1 260 250 15 0 chr5 99279628 99279696 -103805836 + L1MC/D LINE L1 5775 5843 -1965 747 258 49 66 chr5 99280394 99280681 -103804851 + MLT1J LTR MaLR 227 508 -3 305 289 91 33 chr5 99281122 99281243 -103804289 + MIR SINE MIR 22 149 -113 254 364 20 0 chr5 99281674 99281773 -103803759 - MIR SINE MIR -109 153 53 182 37 37 0 chr5 99281796 99281823 -103803709 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3897 70 2 0 chr5 99281823 99282322 -103803210 - L1PA7 LINE L1 -16 6138 5639 303 49 0 0 chr5 99282514 99282555 -103802977 + (CA)n Simple_repeat Simple_repeat 2 42 0 2932 6 0 0 chr5 99282573 99282891 -103802641 - AluYb8 SINE Alu 0 318 1 181 255 85 57 chr5 99283066 99283172 -103802360 + L2 LINE L2 3200 3308 -5 22 0 0 0 chr5 99283805 99283827 -103801705 + AT_rich Low_complexity Low_complexity 1 22 0 371 286 25 25 chr5 99284478 99284597 -103800935 - MIR SINE MIR -56 152 34 671 311 38 6 chr5 99284708 99285003 -103800529 + L1ME3A LINE L1 5395 5704 -462 361 290 23 0 chr5 99285004 99285135 -103800397 + L1ME3A LINE L1 5741 5874 -296 1112 216 17 45 chr5 99286346 99286633 -103798899 + AluJb SINE Alu 28 306 -6 248 400 43 9 chr5 99287096 99287211 -103798321 - MIR3 SINE MIR -40 168 50 385 300 9 0 chr5 99287229 99287339 -103798193 - MIR SINE MIR -9 253 143 475 251 152 12 chr5 99288316 99288487 -103797045 + MIR SINE MIR 36 230 -32 21 36 0 0 chr5 99288491 99288519 -103797013 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 99289205 99289226 -103796306 + AT_rich Low_complexity Low_complexity 1 21 0 919 216 47 16 chr5 99291087 99291497 -103794035 + MLT1D LTR MaLR 55 505 0 316 262 45 35 chr5 99292057 99292200 -103793332 + MLT1J2 LTR MaLR 67 213 -196 566 352 63 13 chr5 99292914 99293295 -103792237 + LTR16B LTR ERVL 1 400 -64 399 362 65 19 chr5 99293351 99293674 -103791858 + HERV16 LTR ERVL 51 388 -4608 2351 133 8 3 chr5 99293920 99294282 -103791250 - THE1B LTR MaLR 0 364 1 566 284 19 33 chr5 99294698 99294909 -103790623 + HERV16 LTR ERVL 1145 1352 -3644 764 143 26 32 chr5 99294909 99295063 -103790469 + MLT1B LTR MaLR 1 153 -237 506 312 36 23 chr5 99295180 99295401 -103790131 + HERV16 LTR ERVL 1348 1571 -3425 1821 322 69 20 chr5 99295452 99297352 -103788180 + HERV16 LTR ERVL 1707 3482 -1514 764 223 32 25 chr5 99297384 99297721 -103787811 - LTR52 LTR ERVL -37 384 1 1321 345 89 35 chr5 99298005 99299001 -103786531 + HERV16 LTR ERVL 4029 5107 -378 5968 143 55 22 chr5 99299001 99300192 -103785340 + Tigger3b DNA MER2_type 1 1230 -1 1321 345 89 35 chr5 99300192 99300435 -103785097 + HERV16 LTR ERVL 5107 5335 -150 732 325 51 45 chr5 99300561 99300896 -103784636 + LTR16B LTR ERVL 6 342 -122 321 82 0 0 chr5 99301611 99301660 -103783872 + (A)n Simple_repeat Simple_repeat 1 49 0 537 306 83 43 chr5 99302377 99302701 -103782831 + LTR16B LTR ERVL 6 342 -122 321 82 0 0 chr5 99303403 99303452 -103782080 + (A)n Simple_repeat Simple_repeat 1 49 0 181 309 73 0 chr5 99303987 99304042 -103781490 + MIR SINE MIR 201 259 -3 22 0 0 0 chr5 99304585 99304607 -103780925 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 99304781 99304805 -103780727 + AT_rich Low_complexity Low_complexity 1 24 0 315 312 140 25 chr5 99305897 99306054 -103779478 + MIR3 SINE MIR 3 177 -31 365 276 7 41 chr5 99308406 99308551 -103776981 + L2 LINE L2 3158 3297 -16 254 298 97 78 chr5 99309119 99309622 -103775910 - L2 LINE L2 -767 2547 2035 235 259 50 43 chr5 99310236 99310375 -103775157 + L2 LINE L2 3158 3297 -16 289 347 78 55 chr5 99310874 99311491 -103774041 - L2 LINE L2 -693 2621 1991 201 296 112 24 chr5 99312242 99312367 -103773165 + MIR3 SINE MIR 6 141 -67 21 36 0 0 chr5 99312611 99312639 -103772893 + AT_rich Low_complexity Low_complexity 1 28 0 257 296 130 35 chr5 99312878 99312993 -103772539 - MIR SINE MIR -122 140 15 389 20 0 20 chr5 99313045 99313096 -103772436 + (TG)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 99313095 99313118 -103772414 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 4361 117 19 4 chr5 99313170 99313853 -103771679 + L1PB3 LINE L1 5460 6152 -2 466 254 96 68 chr5 99314393 99314570 -103770962 - L2 LINE L2 -4 3309 3128 209 389 0 0 chr5 99315081 99315153 -103770379 + L2 LINE L2 3242 3313 0 2355 163 16 2 chr5 99315225 99315649 -103769883 + L1PA14 LINE L1 3896 4325 -1821 5855 102 18 1 chr5 99315761 99317348 -103768184 + L1PA14 LINE L1 4522 6152 -9 570 217 72 26 chr5 99317409 99317561 -103767971 - MIR SINE MIR -1 261 103 2368 67 0 49 chr5 99320513 99320840 -103764692 - AluY SINE Alu 0 311 1 228 180 0 20 chr5 99323024 99323074 -103762458 + LTR67 LTR ERVL 458 506 -51 371 81 0 70 chr5 99323076 99323162 -103762370 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 781 132 22 33 chr5 99323162 99323344 -103762188 + GA-rich Low_complexity Low_complexity 1 180 0 422 319 113 51 chr5 99325206 99325818 -103759714 + L1MC4a LINE L1 5946 6595 -1213 283 225 25 12 chr5 99325831 99325911 -103759621 + L1MC5 LINE L1 6643 6723 -1238 737 304 38 40 chr5 99326389 99326836 -103758696 - MERVL LTR ERVL -875 4610 4165 319 347 65 26 chr5 99326908 99327216 -103758316 - MERVL LTR ERVL -1730 4034 3715 651 168 23 103 chr5 99327240 99327454 -103758078 + L1MC5 LINE L1 7721 7917 -44 488 269 142 46 chr5 99327891 99328346 -103757186 + MLT1G LTR MaLR 1 584 -6 32 26 0 0 chr5 99328592 99328631 -103756901 + AT_rich Low_complexity Low_complexity 1 39 0 1302 88 16 173 chr5 99329561 99329879 -103755653 - THE1C-int LTR MaLR -1312 268 1 2369 135 33 0 chr5 99329879 99330242 -103755290 - THE1C LTR MaLR 0 375 1 24 32 0 0 chr5 99330488 99330519 -103755013 + AT_rich Low_complexity Low_complexity 1 31 0 1940 161 3 0 chr5 99330526 99330830 -103754702 + AluSq SINE Alu 2 306 -7 228 35 0 0 chr5 99331354 99331383 -103754149 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1035 133 12 24 chr5 99332046 99332212 -103753320 - THE1B LTR MaLR 0 364 201 5672 92 22 0 chr5 99332212 99332984 -103752548 - THE1B-int LTR MaLR -790 790 2 2191 154 5 19 chr5 99332985 99333354 -103752178 - THE1B LTR MaLR 0 364 1 418 316 53 0 chr5 99333767 99333900 -103751632 + MIR SINE MIR 20 159 -103 2493 78 0 0 chr5 99333917 99334226 -103751306 + AluY SINE Alu 1 309 -2 877 304 35 16 chr5 99334371 99334740 -103750792 + L1ME1 LINE L1 30 405 -6018 982 260 73 23 chr5 99334998 99335352 -103750180 + L1ME1 LINE L1 902 1273 -5150 2824 251 91 19 chr5 99335361 99336547 -103748985 + L1ME1 LINE L1 3573 4843 -2098 2575 251 45 40 chr5 99336563 99337338 -103748194 + L1ME1 LINE L1 5490 6277 -684 2268 194 74 52 chr5 99337338 99337976 -103747556 + MLT1E1 LTR MaLR 1 652 -2 2575 251 45 40 chr5 99337976 99338662 -103746870 + L1ME1 LINE L1 6277 6958 -3 580 323 143 11 chr5 99338684 99339056 -103746476 - MLT1J2 LTR MaLR -21 429 9 287 238 218 0 chr5 99341171 99341272 -103744260 - L2 LINE L2 -1 3271 3149 238 326 92 80 chr5 99341456 99341846 -103743686 - L2 LINE L2 -342 2972 2578 1635 274 65 30 chr5 99342144 99342717 -103742815 - MLT1E LTR MaLR 0 593 1 380 345 41 7 chr5 99342935 99343080 -103742452 + L2 LINE L2 3107 3256 -16 322 274 63 11 chr5 99343798 99343893 -103741639 + MIR SINE MIR 104 203 -59 186 43 0 0 chr5 99345699 99345722 -103739810 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 821 287 25 8 chr5 99346260 99346497 -103739035 - MIR SINE MIR -8 254 14 399 313 107 0 chr5 99346504 99346654 -103738878 + MARNA DNA Mariner 44 209 -377 204 271 17 0 chr5 99346688 99346747 -103738785 + CT-rich Low_complexity Low_complexity 5 64 0 941 287 85 6 chr5 99346895 99347223 -103738309 + MLT1A1 LTR MaLR 3 356 -9 363 254 88 23 chr5 99347486 99347696 -103737836 + MLT1K LTR MaLR 203 506 -82 375 329 84 28 chr5 99348386 99348635 -103736897 - MER115 DNA AcHobo -425 268 6 246 125 0 0 chr5 99350162 99350210 -103735322 + (T)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 99352085 99352107 -103733425 + AT_rich Low_complexity Low_complexity 1 22 0 345 62 0 0 chr5 99352511 99352559 -103732973 + (T)n Simple_repeat Simple_repeat 1 48 0 187 289 0 0 chr5 99353350 99353395 -103732137 - L3 LINE CR1 -860 717 673 22 0 0 0 chr5 99354465 99354487 -103731045 + AT_rich Low_complexity Low_complexity 1 22 0 207 242 65 0 chr5 99355250 99355312 -103730220 - MIR SINE MIR -16 246 181 557 28 14 0 chr5 99357789 99357860 -103727672 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 22 70 0 0 chr5 99358268 99358311 -103727221 + AT_rich Low_complexity Low_complexity 1 43 0 577 179 14 86 chr5 99358618 99358758 -103726774 + FLAM_C SINE Alu 4 133 0 388 215 0 0 chr5 99358766 99358831 -103726701 + AluJ/FRAM SINE Alu 217 281 -21 185 243 103 81 chr5 99359628 99359764 -103725768 - L2 LINE L2 0 3313 3175 1086 215 46 38 chr5 99360743 99361004 -103724528 + Tigger7 DNA MER2_type 2 264 -469 215 228 0 0 chr5 99361006 99361063 -103724469 + A-rich Low_complexity Low_complexity 1 57 0 504 146 34 0 chr5 99361070 99361159 -103724373 + Tigger7 DNA MER2_type 2394 2485 -2 448 272 129 18 chr5 99361667 99361884 -103723648 + MIR SINE MIR 8 248 -14 391 270 84 52 chr5 99362413 99362625 -103722907 - MIR SINE MIR -25 237 20 577 179 14 86 chr5 99364614 99364754 -103720778 + FLAM_C SINE Alu 4 133 0 313 246 0 0 chr5 99364762 99364827 -103720705 + AluJ/FRAM SINE Alu 217 281 -21 262 321 111 12 chr5 99365609 99365771 -103719761 - L2 LINE L2 0 3313 3136 2316 103 3 0 chr5 99365975 99366287 -103719245 + AluSq SINE Alu 1 313 0 1215 219 30 38 chr5 99367266 99367531 -103718001 + Tigger7 DNA MER2_type 2 264 -2223 27 62 0 0 chr5 99367531 99367579 -103717953 + AT_rich Low_complexity Low_complexity 1 48 0 583 174 0 0 chr5 99367598 99367690 -103717842 + Tigger7 DNA MER2_type 2394 2485 -2 380 199 134 70 chr5 99368222 99368437 -103717095 + MIR SINE MIR 15 248 -14 200 295 33 66 chr5 99368961 99369083 -103716449 - MIR SINE MIR -25 237 120 6515 131 33 17 chr5 99420313 99422172 -103663360 + L1MA1 LINE L1 4417 6301 -1 21 36 0 0 chr5 99422173 99422201 -103663331 + AT_rich Low_complexity Low_complexity 1 28 0 608 241 32 89 chr5 99422218 99422312 -103663220 + L1ME LINE L1 1654 1752 -4829 2135 116 3 0 chr5 99422312 99422606 -103662926 + AluSx SINE Alu 1 295 -17 608 241 32 89 chr5 99422606 99422891 -103662641 + L1ME LINE L1 1752 2042 -4539 441 54 27 14 chr5 99423612 99423686 -103661846 + (TG)n Simple_repeat Simple_repeat 2 76 0 294 308 135 0 chr5 99424258 99424443 -103661089 + L1ME LINE L1 1878 2087 -4634 262 310 82 17 chr5 99424800 99425077 -103660455 + L1ME LINE L1 2437 2693 -3847 281 308 42 0 chr5 99425896 99426016 -103659516 + L1ME LINE L1 4867 4991 -1549 21 57 0 0 chr5 99426129 99426164 -103659368 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 99426195 99426216 -103659316 + AT_rich Low_complexity Low_complexity 1 21 0 373 297 184 17 chr5 99426534 99426995 -103658537 + L1ME LINE L1 5659 6216 -299 210 350 81 32 chr5 99427871 99427994 -103657538 + L2 LINE L2 3182 3310 -3 256 324 88 22 chr5 99428007 99428143 -103657389 + MIR SINE MIR 53 197 -65 793 134 0 37 chr5 99429310 99429497 -103656035 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2114 139 0 0 chr5 99429509 99429819 -103655713 - AluSx SINE Alu -2 310 1 21 0 0 0 chr5 99430675 99430696 -103654836 + AT_rich Low_complexity Low_complexity 1 21 0 324 351 30 8 chr5 99432554 99432685 -103652847 - L2 LINE L2 -1 3271 3138 21 36 0 0 chr5 99434821 99434849 -103650683 + AT_rich Low_complexity Low_complexity 1 28 0 550 356 11 0 chr5 99435357 99435548 -103649984 - MIR SINE MIR -65 197 5 294 333 58 22 chr5 99435773 99435911 -103649621 - MIR3 SINE MIR -36 172 30 337 342 20 7 chr5 99436352 99436501 -103649031 + MIR SINE MIR 100 250 -12 2147 135 92 22 chr5 99436701 99437101 -103648431 + MSTA LTR MaLR 1 428 0 188 340 39 19 chr5 99437195 99437298 -103648234 + L2 LINE L2 2657 2761 -553 21 71 0 0 chr5 99438154 99438196 -103647336 + AT_rich Low_complexity Low_complexity 1 42 0 34 24 0 0 chr5 99438287 99438328 -103647204 + AT_rich Low_complexity Low_complexity 1 41 0 1699 151 7 21 chr5 99438983 99439274 -103646258 - AluJo SINE Alu -13 299 13 2196 106 0 3 chr5 99440174 99440475 -103645057 - AluSg SINE Alu -10 300 1 21 36 0 0 chr5 99440974 99441002 -103644530 + AT_rich Low_complexity Low_complexity 1 28 0 212 303 92 55 chr5 99444877 99444986 -103640546 - L2 LINE L2 -19 3253 3141 460 266 89 101 chr5 99445305 99445700 -103639832 + MLT1J LTR MaLR 79 468 -43 550 334 137 45 chr5 99445777 99447000 -103638532 - L2 LINE L2 0 3272 1821 237 236 28 0 chr5 99447118 99447224 -103638308 + (TA)n Simple_repeat Simple_repeat 2 110 0 234 0 0 0 chr5 99448331 99448357 -103637175 + (A)n Simple_repeat Simple_repeat 1 26 0 2053 97 7 10 chr5 99448372 99448672 -103636860 + AluSp SINE Alu 1 299 -14 299 237 0 0 chr5 99449205 99449264 -103636268 + MER63 DNA MER1_type 683 741 -320 275 275 50 0 chr5 99449274 99449354 -103636178 + MER63 DNA MER1_type 978 1061 0 626 144 17 0 chr5 99449363 99449481 -103636051 + GA-rich Low_complexity Low_complexity 1 120 0 544 305 17 17 chr5 99450301 99450475 -103635057 + MIR SINE MIR 75 248 -14 2167 114 10 0 chr5 99450811 99451117 -103634415 + AluSp SINE Alu 1 309 -4 180 125 0 0 chr5 99451281 99451313 -103634219 + (TAA)n Simple_repeat Simple_repeat 2 33 0 488 286 164 33 chr5 99452335 99452548 -103632984 - MIR SINE MIR -19 243 3 234 62 0 0 chr5 99452988 99453020 -103632512 + (A)n Simple_repeat Simple_repeat 1 32 0 284 301 13 46 chr5 99453339 99453492 -103632040 + HAL1b LINE L1 229 376 -972 535 288 43 39 chr5 99453758 99454039 -103631493 + HAL1b LINE L1 475 756 -592 227 203 16 0 chr5 99454856 99454920 -103630612 + (TAA)n Simple_repeat Simple_repeat 3 67 0 21 36 0 0 chr5 99455301 99455329 -103630203 + AT_rich Low_complexity Low_complexity 1 28 0 473 143 0 0 chr5 99455501 99455585 -103629947 + L1PA16 LINE L1 6080 6163 -3 210 299 29 11 chr5 99455625 99455799 -103629733 + (TA)n Simple_repeat Simple_repeat 1 177 0 263 270 30 0 chr5 99456092 99456192 -103629340 + L1MC4a LINE L1 3532 3634 -2512 1189 321 91 51 chr5 99456258 99457693 -103627839 + L1MC4a LINE L1 3687 5178 -968 23 0 0 0 chr5 99457751 99457774 -103627758 + AT_rich Low_complexity Low_complexity 1 23 0 382 323 45 29 chr5 99457788 99458098 -103627434 + L1MC4a LINE L1 5569 5883 -1925 399 127 0 0 chr5 99458106 99458169 -103627363 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 99458295 99458316 -103627216 + AT_rich Low_complexity Low_complexity 1 21 0 268 339 103 42 chr5 99458617 99458782 -103626750 + MIR SINE MIR 14 188 -74 225 265 12 60 chr5 99462179 99462262 -103623270 - MIR SINE MIR -65 197 119 284 282 68 0 chr5 99463033 99463136 -103622396 + MIR SINE MIR 57 166 -96 227 346 65 0 chr5 99463958 99464065 -103621467 - MIR SINE MIR -72 190 77 33 0 0 0 chr5 99469106 99469139 -103616393 + AT_rich Low_complexity Low_complexity 1 33 0 741 272 56 36 chr5 99469256 99469506 -103616026 + MIR SINE MIR 8 262 0 279 0 0 0 chr5 99472036 99472067 -103613465 + (TG)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 99473015 99473036 -103612496 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr5 99473243 99473298 -103612234 + AT_rich Low_complexity Low_complexity 1 55 0 471 309 115 0 chr5 99473591 99473782 -103611750 - MIR SINE MIR -13 249 37 18664 32 2 57 chr5 99473853 99476402 -103609130 - L1P LINE L1 -1769 4377 1967 505 181 79 8 chr5 99477697 99477724 -103607808 - L1MA10 LINE L1 -25 6309 6283 2225 249 66 33 chr5 99477724 99478733 -103606799 - L1ME1 LINE L1 -51 6184 5139 26090 149 11 13 chr5 99478744 99481701 -103603831 - L1PA8A LINE L1 0 6446 3487 351 0 0 0 chr5 99481701 99481740 -103603792 + (TG)n Simple_repeat Simple_repeat 2 40 0 26090 149 11 13 chr5 99481740 99485166 -103600366 - L1PA8A LINE L1 -2959 3487 3 434 198 17 27 chr5 99485165 99485296 -103600236 - L1ME1 LINE L1 -1065 5150 5025 * 695 232 18 18 chr5 99485300 99485464 -103600068 - FRAM SINE Alu -2 174 11 421 47 31 0 chr5 99485491 99485555 -103599977 + (TTTCC)n Simple_repeat Simple_repeat 4 69 0 3511 239 116 25 chr5 99485573 99486867 -103598665 - L1ME1 LINE L1 -1207 5008 3597 425 228 126 29 chr5 99486873 99486924 -103598608 - L1ME1 LINE L1 -5409 987 942 460 128 26 0 chr5 99486924 99487002 -103598530 - MADE1 DNA Mariner 0 80 1 425 228 126 29 chr5 99487002 99487156 -103598376 - L1ME1 LINE L1 -5454 942 762 277 208 62 7 chr5 99487157 99487301 -103598231 + (TA)n Simple_repeat Simple_repeat 1 152 0 36 62 0 0 chr5 99487543 99487607 -103597925 + AT_rich Low_complexity Low_complexity 1 64 0 1327 274 80 80 chr5 99487607 99487727 -103597805 - L1ME1 LINE L1 -5641 755 636 1654 177 58 3 chr5 99487727 99488021 -103597511 - AluJb SINE Alu -1 311 2 1327 274 80 80 chr5 99488021 99488563 -103596969 - L1ME1 LINE L1 -5759 637 93 21 0 0 0 chr5 99488858 99488879 -103596653 + AT_rich Low_complexity Low_complexity 1 21 0 193 286 87 77 chr5 99489187 99489383 -103596149 - MIR SINE MIR -62 200 3 462 254 56 137 chr5 99491580 99492010 -103593522 + MLT1I LTR MaLR 7 401 -8 1643 211 71 0 chr5 99492899 99493222 -103592310 + MLT1A1 LTR MaLR 10 355 -10 26 0 0 0 chr5 99494323 99494349 -103591183 + AT_rich Low_complexity Low_complexity 1 26 0 2400 77 3 0 chr5 99498230 99498529 -103587003 - AluY SINE Alu -8 303 4 403 294 164 19 chr5 99499665 99499879 -103585653 - MIR SINE MIR -7 255 11 23 86 0 0 chr5 99500186 99500244 -103585288 + AT_rich Low_complexity Low_complexity 1 58 0 22 80 0 0 chr5 99500737 99500787 -103584745 + AT_rich Low_complexity Low_complexity 1 50 0 544 273 86 0 chr5 99500896 99501035 -103584497 + FRAM SINE Alu 1 151 -15 25 0 0 0 chr5 99501199 99501224 -103584308 + AT_rich Low_complexity Low_complexity 1 25 0 252 86 0 0 chr5 99501233 99501268 -103584264 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2035 103 0 46 chr5 99501271 99501573 -103583959 - AluSq SINE Alu -25 288 1 24 32 0 0 chr5 99501856 99501887 -103583645 + AT_rich Low_complexity Low_complexity 1 31 0 408 77 0 0 chr5 99501892 99501944 -103583588 - Alu SINE Alu -19 292 241 23 0 0 0 chr5 99501994 99502017 -103583515 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 99502333 99502354 -103583178 + (A)n Simple_repeat Simple_repeat 1 21 0 247 302 0 0 chr5 99502369 99502432 -103583100 + GA-rich Low_complexity Low_complexity 4 66 0 1479 223 28 53 chr5 99502751 99502878 -103582654 - L1MB7 LINE L1 -9 6175 6049 2873 239 46 52 chr5 99502878 99504980 -103580552 - L1MC4 LINE L1 -466 6529 4810 2512 106 16 3 chr5 99504983 99505351 -103580181 + THE1C LTR MaLR 3 375 0 1314 219 54 26 chr5 99505366 99505754 -103579778 - L1MC4 LINE L1 -5222 1637 1239 303 273 37 74 chr5 99505997 99506213 -103579319 + L1M4 LINE L1 3729 3936 -2210 359 255 11 0 chr5 99506215 99506309 -103579223 + L1ME3A LINE L1 5857 5951 -219 23 33 0 0 chr5 99506329 99506359 -103579173 + AT_rich Low_complexity Low_complexity 1 30 0 329 256 82 36 chr5 99506372 99506567 -103578965 + L1ME3A LINE L1 5963 6166 -4 374 195 115 9 chr5 99506577 99506690 -103578842 + L1MA10 LINE L1 6210 6334 0 958 248 24 4 chr5 99507787 99508033 -103577499 + MIR SINE MIR 12 262 0 21 0 0 0 chr5 99508103 99508124 -103577408 + AT_rich Low_complexity Low_complexity 1 21 0 2529 110 13 5 chr5 99508160 99508532 -103577000 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr5 99508867 99508891 -103576641 + AT_rich Low_complexity Low_complexity 1 24 0 662 248 31 0 chr5 99509222 99509383 -103576149 + LTR16A1 LTR ERVL 1 166 -291 216 149 0 0 chr5 99509664 99509711 -103575821 + (TG)n Simple_repeat Simple_repeat 1 47 0 186 43 0 0 chr5 99509757 99509780 -103575752 + (CA)n Simple_repeat Simple_repeat 2 24 0 22 70 0 0 chr5 99510081 99510124 -103575408 + AT_rich Low_complexity Low_complexity 1 43 0 28 61 0 0 chr5 99511386 99511435 -103574097 + AT_rich Low_complexity Low_complexity 1 49 0 2038 157 14 0 chr5 99511488 99511839 -103573693 - L1PB3 LINE L1 -7 6147 5792 252 244 47 0 chr5 99511872 99511958 -103573574 + L1MC4 LINE L1 6614 6703 -1339 1099 176 5 34 chr5 99511988 99512193 -103573339 - L1PB3 LINE L1 -375 5779 5581 1942 129 31 67 chr5 99512439 99512796 -103572736 + THE1B LTR MaLR 1 344 -20 25 51 0 0 chr5 99513137 99513176 -103572356 + AT_rich Low_complexity Low_complexity 1 39 0 204 135 0 0 chr5 99513825 99513862 -103571670 + (GA)n Simple_repeat Simple_repeat 1 37 0 2825 231 45 25 chr5 99513868 99515053 -103570479 + L1MCb LINE L1 768 2071 -4493 25814 152 10 16 chr5 99515053 99516254 -103569278 + L1PA8 LINE L1 2 1208 -5279 321 26 0 0 chr5 99516254 99516292 -103569240 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 25814 152 10 16 chr5 99516292 99521558 -103563974 + L1PA8 LINE L1 1208 6487 0 2889 111 73 0 chr5 99521683 99522133 -103563399 + L1PA16 LINE L1 5675 6157 -9 2752 251 50 31 chr5 99522150 99523660 -103561872 + L1MCb LINE L1 2150 3638 -2926 2181 132 0 0 chr5 99523660 99523970 -103561562 + AluSq SINE Alu 3 312 -1 2752 251 50 31 chr5 99523970 99524032 -103561500 + L1MCb LINE L1 3638 3697 -2867 25 31 0 0 chr5 99524779 99524811 -103560721 + AT_rich Low_complexity Low_complexity 1 32 0 180 152 0 0 chr5 99524868 99524901 -103560631 + (TA)n Simple_repeat Simple_repeat 2 34 0 286 232 60 76 chr5 99525056 99525190 -103560342 - MLT1J2 LTR MaLR -214 236 103 1911 201 6 4 chr5 99525482 99525937 -103559595 + MLT2B2 LTR ERVL 1 504 -11 328 287 81 35 chr5 99525937 99526111 -103559421 - L1MC/D LINE L1 -2300 5508 5327 1255 259 37 39 chr5 99526568 99526974 -103558558 - LTR40b LTR ERVL 0 462 58 22 80 0 0 chr5 99527128 99527178 -103558354 + AT_rich Low_complexity Low_complexity 1 50 0 1860 133 85 25 chr5 99527194 99527548 -103557984 - THE1C LTR MaLR 0 375 1 5921 128 1 5 chr5 99527548 99528402 -103557130 - THE1C-int LTR MaLR 0 1580 730 722 130 99 8 chr5 99528407 99528538 -103556994 - THE1C LTR MaLR -232 143 1 2102 145 3 0 chr5 99528771 99529081 -103556451 - AluSq SINE Alu -2 311 1 359 322 100 46 chr5 99529547 99529757 -103555775 + MIR SINE MIR 11 237 -25 1457 266 66 26 chr5 99529757 99530455 -103555077 - HsTC2c DNA MER2_type 0 729 4 359 322 100 46 chr5 99530455 99530483 -103555049 + MIR SINE MIR 237 262 0 3461 202 50 10 chr5 99530649 99531462 -103554070 + L1MC3 LINE L1 5765 6610 -1175 545 71 0 0 chr5 99531464 99531534 -103553998 + HERV17 LTR ERV1 5950 6019 -2607 266 105 0 0 chr5 99531528 99531566 -103553966 + HERV17 LTR ERV1 7511 7548 -1078 * 2283 82 3 0 chr5 99531556 99531847 -103553685 + HERV17 LTR ERV1 8335 8626 0 5780 90 16 0 chr5 99531847 99532615 -103552917 + LTR17 LTR ERV1 1 780 0 1271 158 57 36 chr5 99532615 99532894 -103552638 - L1MA7 LINE L1 -79 6212 5928 4131 183 55 33 chr5 99532951 99533448 -103552084 + L1MC3 LINE L1 6769 7254 -531 1941 203 21 0 chr5 99533448 99533837 -103551695 + MLT2C1 LTR ERVL 1 397 0 4131 183 55 33 chr5 99533837 99534001 -103551531 + L1MC3 LINE L1 7254 7413 -372 1392 252 20 44 chr5 99534001 99534406 -103551126 + MSTD LTR MaLR 2 396 0 4131 183 55 33 chr5 99534406 99534579 -103550953 + L1MC3 LINE L1 7413 7581 -204 212 0 36 0 chr5 99534579 99534607 -103550925 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1535 200 7 24 chr5 99534609 99534904 -103550628 - AluJo SINE Alu -22 290 1 4131 183 55 33 chr5 99534904 99535052 -103550480 + L1MC3 LINE L1 7581 7777 -8 21 71 0 0 chr5 99535514 99535556 -103549976 + AT_rich Low_complexity Low_complexity 1 42 0 239 325 56 56 chr5 99536807 99536967 -103548565 + MIR SINE MIR 66 225 -37 256 211 0 14 chr5 99537583 99537654 -103547878 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9640 150 52 25 chr5 99538035 99539831 -103545701 + L1PA6 LINE L1 11 1856 -4290 4872 65 1 22 chr5 99539836 99540484 -103545048 - L1PA5 LINE L1 -1 6153 5519 2284 107 0 0 chr5 99540486 99540785 -103544747 + AluY SINE Alu 1 299 -12 21616 79 2 3 chr5 99540785 99544615 -103540917 + L1PA6 LINE L1 2323 6148 -6 239 70 0 23 chr5 99545115 99545158 -103540374 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 333 0 0 0 chr5 99545307 99545344 -103540188 + (TG)n Simple_repeat Simple_repeat 1 37 0 1079 234 78 85 chr5 99545462 99545898 -103539634 - MLT1J2 LTR MaLR -17 433 1 741 262 104 73 chr5 99546989 99547412 -103538120 - MLT1J2 LTR MaLR -14 436 1 922 247 235 34 chr5 99547873 99548346 -103537186 + MLT1E LTR MaLR 26 593 0 318 341 108 7 chr5 99548628 99548860 -103536672 - MIR SINE MIR -3 259 6 7467 30 19 5 chr5 99548906 99549864 -103535668 - L1PA3 LINE L1 -7 6148 5188 269 288 43 4 chr5 99550082 99550199 -103535333 - MIR SINE MIR -63 145 42 236 333 116 31 chr5 99551914 99552043 -103533489 + L2 LINE L2 3173 3312 -1 414 287 126 64 chr5 99554355 99554728 -103530804 + MLT1J LTR MaLR 116 511 0 22 0 0 0 chr5 99555879 99555901 -103529631 + AT_rich Low_complexity Low_complexity 1 22 0 233 218 0 18 chr5 99555918 99555973 -103529559 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 333 0 0 0 chr5 99556424 99556461 -103529071 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 442 68 0 27 chr5 99556460 99556533 -103528999 + (TA)n Simple_repeat Simple_repeat 1 71 0 21 36 0 0 chr5 99557895 99557923 -103527609 + AT_rich Low_complexity Low_complexity 1 28 0 491 211 47 149 chr5 99558328 99558650 -103526882 - L2 LINE L2 -1 3312 3024 4824 231 5 7 chr5 99558802 99559957 -103525575 - L1P LINE L1 -949 5197 4045 1620 179 33 97 chr5 99560258 99560648 -103524884 + MLT1A1 LTR MaLR 1 365 0 216 130 0 0 chr5 99562519 99562565 -103522967 + (A)n Simple_repeat Simple_repeat 1 46 0 364 183 12 12 chr5 99562586 99562668 -103522864 - MLT1E1 LTR MaLR 0 654 573 2047 129 3 7 chr5 99562683 99563027 -103522505 + AluSx SINE Alu 1 312 0 843 240 32 44 chr5 99563027 99563173 -103522359 - MLT1E1 LTR MaLR -406 248 105 1971 138 44 0 chr5 99563173 99563470 -103522062 - AluSx SINE Alu -2 310 1 843 240 32 44 chr5 99563470 99563573 -103521959 - MLT1E1 LTR MaLR -549 105 2 2238 107 0 0 chr5 99563573 99563872 -103521660 - AluSg SINE Alu -11 299 1 956 279 50 26 chr5 99564353 99564730 -103520802 - MLT1I LTR MaLR -23 386 1 258 81 0 0 chr5 99566095 99566132 -103519400 + (TG)n Simple_repeat Simple_repeat 1 37 0 239 248 8 137 chr5 99566193 99566310 -103519222 + MER102b DNA MER1_type 233 334 -7 239 261 174 11 chr5 99566431 99566523 -103519009 + MIR SINE MIR 129 235 -27 180 80 0 240 chr5 99566500 99566550 -103518982 + L2 LINE L2 3217 3254 -18 * 295 316 11 32 chr5 99566586 99566681 -103518851 + MIR SINE MIR 7 99 -163 216 277 53 21 chr5 99568561 99568655 -103516877 - L2 LINE L2 -927 2387 2291 486 246 159 78 chr5 99568660 99568969 -103516563 - MER46C DNA MER2_type -4 334 1 489 241 57 0 chr5 99569263 99569421 -103516111 - L1ME4a LINE L1 -4 6117 5951 519 220 17 17 chr5 99572364 99572482 -103513050 + FLAM_C SINE Alu 1 118 -25 251 250 52 81 chr5 99572607 99572635 -103512897 - HAL1 LINE L1 -31 2476 2449 2143 114 7 0 chr5 99572635 99572933 -103512599 - AluSq SINE Alu -13 300 1 251 250 52 81 chr5 99572933 99573040 -103512492 - HAL1 LINE L1 -58 2449 2345 2124 274 85 43 chr5 99573040 99573344 -103512188 - HAL1 LINE L1 -122 2385 2095 1485 132 21 155 chr5 99573344 99573777 -103511755 + THE1C LTR MaLR 1 375 0 2124 274 85 43 chr5 99573777 99574812 -103510720 - HAL1 LINE L1 -412 2095 990 22 88 0 0 chr5 99575826 99575883 -103509649 + AT_rich Low_complexity Low_complexity 1 57 0 1124 201 4 18 chr5 99576927 99577156 -103508376 + AluJb SINE Alu 87 312 0 229 344 89 0 chr5 99577159 99577249 -103508283 + MIR SINE MIR 42 139 -69 664 295 161 22 chr5 99580244 99580692 -103504840 - MLT1L LTR MaLR -22 593 84 413 346 39 17 chr5 99581478 99581657 -103503875 - MIR SINE MIR -75 187 5 217 286 62 27 chr5 99581979 99582091 -103503441 + L2 LINE L2 2599 2714 -600 244 274 40 125 chr5 99582098 99582344 -103503188 + L1MDa LINE L1 404 1011 -5529 3852 225 81 14 chr5 99582483 99583709 -103501823 + L1MDa LINE L1 1010 2317 -4223 965 309 70 34 chr5 99583845 99584397 -103501135 + L2 LINE L2 2739 3313 0 237 286 55 11 chr5 99586292 99586383 -103499149 - MIR SINE MIR -70 138 44 1530 104 126 0 chr5 99586413 99586683 -103498849 - L1MA5A LINE L1 0 6297 5994 257 345 108 32 chr5 99589233 99589575 -103495957 - L2 LINE L2 -782 2532 2165 299 234 39 0 chr5 99590694 99590771 -103494761 + MER103 DNA DNA 45 124 -42 514 302 55 22 chr5 99590946 99591221 -103494311 + LTR16A1 LTR ERVL 159 442 -15 249 179 0 0 chr5 99591388 99591427 -103494105 - MER115 DNA AcHobo -7 686 648 521 293 169 12 chr5 99591651 99591900 -103493632 - Zaphod DNA AcHobo -3653 378 91 368 40 20 0 chr5 99591900 99591950 -103493582 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr5 99594255 99594284 -103491248 + AT_rich Low_complexity Low_complexity 1 29 0 559 176 122 103 chr5 99594855 99595117 -103490415 + L1ME LINE L1 5538 5804 -366 238 290 60 0 chr5 99595122 99595222 -103490310 + Looper DNA T2_type 865 970 -588 * 644 220 69 6 chr5 99595209 99595382 -103490150 + Looper DNA T2_type 1374 1557 -1 13784 141 42 12 chr5 99595409 99595898 -103489634 - Tigger1 DNA MER2_type 0 2418 1945 2388 70 0 0 chr5 99595898 99596197 -103489335 - AluY SINE Alu -12 299 1 13784 141 42 12 chr5 99596197 99598055 -103487477 - Tigger1 DNA MER2_type -473 1945 2 2437 206 31 30 chr5 99598210 99598278 -103487254 + MLT2B2 LTR ERVL 1 67 -448 886 217 159 5 chr5 99598278 99598485 -103487047 + MER8 DNA MER2_type 1 239 0 2437 206 31 30 chr5 99598485 99598925 -103486607 + MLT2B2 LTR ERVL 67 510 -5 1327 226 77 3 chr5 99599323 99599672 -103485860 - MER63 DNA MER1_type -1 1061 687 739 256 132 0 chr5 99599667 99599925 -103485607 - MER63 DNA MER1_type -769 292 1 * 186 43 0 0 chr5 99600343 99600366 -103485166 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 1789 203 27 11 chr5 99600651 99600705 -103484827 - MLT2B2 LTR ERVL 0 554 502 414 0 0 0 chr5 99600705 99600751 -103484781 + (CA)n Simple_repeat Simple_repeat 2 47 0 1789 203 27 11 chr5 99600751 99601149 -103484383 - MLT2B2 LTR ERVL -52 502 1 1974 224 92 12 chr5 99601154 99601653 -103483879 + MER34 LTR ERV1 1 539 -3 2094 119 6 10 chr5 99602137 99602449 -103483083 - AluSx SINE Alu -1 311 1 37 52 0 0 chr5 99604714 99604772 -103480760 + AT_rich Low_complexity Low_complexity 1 58 0 200 114 45 0 chr5 99605020 99605064 -103480468 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 815 263 16 0 chr5 99605663 99605857 -103479675 + MIR SINE MIR 64 260 -2 419 291 8 0 chr5 99605906 99606033 -103479499 + MER94 DNA DNA 6 133 -1 360 302 17 17 chr5 99606108 99606224 -103479308 - MIR3 SINE MIR -5 203 88 197 314 71 0 chr5 99606482 99606552 -103478980 + MER5B DNA MER1_type 84 158 -20 351 228 215 20 chr5 99607145 99607294 -103478238 - MER5B DNA MER1_type 0 178 1 256 291 64 100 chr5 99607406 99607570 -103477962 + MIR SINE MIR 47 203 -59 1697 178 3 34 chr5 99607570 99607890 -103477642 + AluJb SINE Alu 3 312 0 256 291 64 100 chr5 99607890 99607945 -103477587 + MIR SINE MIR 203 258 -4 1881 196 32 8 chr5 99608286 99608345 -103477187 - MLT2B1 LTR ERVL 0 520 464 513 32 0 0 chr5 99608345 99608408 -103477124 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 1881 196 32 8 chr5 99608408 99608807 -103476725 - MLT2B1 LTR ERVL -56 464 1 203 171 0 0 chr5 99609171 99609206 -103476326 + (CATA)n Simple_repeat Simple_repeat 2 36 0 216 111 0 0 chr5 99610908 99610944 -103474588 + (TAG)n Simple_repeat Simple_repeat 2 37 0 2182 267 93 22 chr5 99611138 99611827 -103473705 + L1ME3A LINE L1 4711 5349 -821 1343 232 96 19 chr5 99611827 99612193 -103473339 - MSTD LTR MaLR -2 394 1 2182 267 93 22 chr5 99612193 99612861 -103472671 + L1ME3A LINE L1 5349 6165 -5 303 191 0 0 chr5 99614638 99614701 -103470831 + (TA)n Simple_repeat Simple_repeat 1 63 0 1592 185 3 30 chr5 99614710 99615008 -103470524 - AluJo SINE Alu -22 290 1 837 257 35 67 chr5 99615721 99616036 -103469496 - MLT1I LTR MaLR -14 395 91 221 313 70 23 chr5 99616254 99616382 -103469150 - MIR SINE MIR -48 214 81 24 0 0 0 chr5 99616724 99616748 -103468784 + AT_rich Low_complexity Low_complexity 1 24 0 239 292 39 110 chr5 99617184 99617338 -103468194 - MER5A DNA MER1_type 0 189 47 758 251 27 5 chr5 99618400 99618587 -103466945 - MER20 DNA MER1_type 0 219 29 260 274 226 0 chr5 99619084 99619190 -103466342 + L2 LINE L2 3184 3313 0 1623 173 84 29 chr5 99619199 99619545 -103465987 - MLT1A1 LTR MaLR 0 365 1 1115 112 0 29 chr5 99620476 99620646 -103464886 - AluSg/x SINE Alu -4 306 142 384 324 85 17 chr5 99620943 99621314 -103464218 - MLT1J LTR MaLR -103 408 1 334 255 198 9 chr5 99621974 99622080 -103463452 + L2 LINE L2 3187 3312 -1 207 0 0 0 chr5 99622707 99622730 -103462802 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 185 393 64 23 chr5 99622758 99622931 -103462601 - MIR3 SINE MIR -6 202 23 306 0 0 0 chr5 99623382 99623416 -103462116 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 21 71 0 0 chr5 99624471 99624513 -103461019 + AT_rich Low_complexity Low_complexity 1 42 0 1900 276 263 72 chr5 99625144 99625440 -103460092 - L2 LINE L2 0 3313 3075 189 0 0 0 chr5 99625440 99625461 -103460071 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1900 276 263 72 chr5 99625461 99625634 -103459898 - L2 LINE L2 -238 3075 2936 1309 201 15 96 chr5 99625634 99625881 -103459651 + MLT1A1 LTR MaLR 1 206 -159 2037 93 8 0 chr5 99625881 99626149 -103459383 + AluSx SINE Alu 34 303 -9 1309 201 15 96 chr5 99626149 99626298 -103459234 + MLT1A1 LTR MaLR 206 365 0 1900 276 263 72 chr5 99626298 99628276 -103457256 - L2 LINE L2 -377 2936 386 31 44 0 0 chr5 99628890 99628935 -103456597 + AT_rich Low_complexity Low_complexity 1 45 0 262 217 167 0 chr5 99629032 99629092 -103456440 - MER58A DNA MER1_type -31 76 7 440 250 18 0 chr5 99629092 99629204 -103456328 + MER96B DNA MER1_type? 296 409 -8 7379 250 48 18 chr5 99629234 99629519 -103456013 + L1MA9 LINE L1 11 286 -5924 2124 123 53 17 chr5 99629519 99629878 -103455654 - THE1C LTR MaLR -3 372 1 7379 250 48 18 chr5 99629878 99633839 -103451693 + L1MA9 LINE L1 286 4104 -2106 4092 198 18 28 chr5 99633855 99635680 -103449852 + L1MA9 LINE L1 4565 6343 -33 499 278 78 78 chr5 99636961 99637307 -103448225 - L2 LINE L2 -97 3216 2871 2160 239 38 12 chr5 99637439 99638017 -103447515 - L1ME1 LINE L1 -4 6162 5570 2149 115 3 3 chr5 99638262 99638558 -103446974 - AluSx SINE Alu -14 298 3 27 0 0 0 chr5 99640076 99640103 -103445429 + AT_rich Low_complexity Low_complexity 1 27 0 2267 53 0 36 chr5 99640107 99640409 -103445123 - AluY SINE Alu -18 293 3 390 337 17 40 chr5 99640720 99640895 -103444637 + MIR SINE MIR 21 191 -71 1388 199 23 30 chr5 99642903 99643205 -103442327 - AluJo SINE Alu -6 306 7 13614 145 28 19 chr5 99643344 99645739 -103439793 - Tigger1 DNA MER2_type -1 2417 1 366 329 133 42 chr5 99645795 99646126 -103439406 + L2 LINE L2 2949 3309 -4 487 325 86 30 chr5 99646560 99646828 -103438704 + L3b LINE CR1 1238 1520 -63 607 307 87 14 chr5 99649010 99649228 -103436304 + MIR SINE MIR 29 262 0 805 210 32 27 chr5 99649946 99650132 -103435400 + MER5A DNA MER1_type 2 188 -1 439 198 207 18 chr5 99652130 99652241 -103433291 + MER5A DNA MER1_type 57 188 -1 398 123 86 12 chr5 99652349 99652430 -103433102 + MER53 DNA DNA 103 189 0 384 311 104 52 chr5 99653063 99653584 -103431948 + L1ME3 LINE L1 461 1008 -5111 409 258 36 16 chr5 99653777 99653971 -103431561 + L1ME3 LINE L1 1176 1373 -4937 1004 306 92 31 chr5 99654149 99655171 -103430361 + L1ME3 LINE L1 3928 5011 -1118 3447 94 0 0 chr5 99655202 99655668 -103429864 - MER41A LTR ERV1 -88 466 1 10237 104 33 6 chr5 99655668 99657182 -103428350 - MER41A-int LTR ERV1 -2 5944 4390 1105 297 86 26 chr5 99657360 99658010 -103427522 + L1ME3 LINE L1 5242 5930 -215 1465 224 4 0 chr5 99658066 99658343 -103427189 + AluJo SINE Alu 3 280 -32 309 51 0 0 chr5 99658349 99658388 -103427144 + (CA)n Simple_repeat Simple_repeat 2 40 0 226 233 50 0 chr5 99658917 99658977 -103426555 - L2 LINE L2 -5 3308 3246 425 293 107 28 chr5 99659220 99659473 -103426059 - MER102a DNA MER1_type 0 330 58 2575 237 23 20 chr5 99659797 99660447 -103425085 + Tigger8 DNA MER2_type 1 652 -14 412 266 14 43 chr5 99660847 99660986 -103424546 - MIR SINE MIR -119 143 9 693 234 93 77 chr5 99661829 99662193 -103423339 + LTR16A1 LTR ERVL 12 381 -76 1229 198 19 129 chr5 99662205 99662615 -103422917 - MLT1A1 LTR MaLR 0 365 1 5987 155 6 19 chr5 99663452 99665162 -103420370 + L1PB1 LINE L1 4096 5780 -371 516 45 0 0 chr5 99665162 99665229 -103420303 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 5987 155 6 19 chr5 99665229 99665588 -103419944 + L1PB1 LINE L1 5780 6142 -9 417 308 141 45 chr5 99665929 99666283 -103419249 - L2 LINE L2 -5 3308 2921 444 295 0 22 chr5 99666409 99666548 -103418984 - MER45C DNA AcHobo -2 951 816 354 176 0 29 chr5 99666793 99666861 -103418671 - MER45C DNA AcHobo -146 807 742 21 0 0 0 chr5 99667221 99667242 -103418290 + AT_rich Low_complexity Low_complexity 1 21 0 267 331 102 13 chr5 99667493 99667650 -103417882 - MIR SINE MIR -89 173 3 704 162 6 98 chr5 99669728 99669901 -103415631 - MER20 DNA MER1_type -36 183 27 362 243 34 57 chr5 99670887 99671039 -103414493 + MLT1J1 LTR MaLR 66 214 -195 1386 117 50 50 chr5 99671568 99671849 -103413683 - MER44D DNA MER2_type -57 552 2 467 257 18 0 chr5 99672749 99672858 -103412674 + MER81 DNA DNA 3 113 -1 23 0 0 0 chr5 99676098 99676121 -103409411 + AT_rich Low_complexity Low_complexity 1 23 0 634 243 124 6 chr5 99676730 99676899 -103408633 + MER5A DNA MER1_type 1 189 0 21 36 0 0 chr5 99676970 99676998 -103408534 + AT_rich Low_complexity Low_complexity 1 28 0 301 289 39 94 chr5 99677015 99677195 -103408337 - MIR SINE MIR -50 212 43 689 250 17 6 chr5 99678736 99678912 -103406620 - MER97a DNA MER1_type? -716 178 1 4648 199 129 44 chr5 99679241 99679394 -103406138 + L1MC4 LINE L1 6475 6614 -1428 441 81 0 0 chr5 99679394 99679456 -103406076 + (TG)n Simple_repeat Simple_repeat 2 63 0 4648 199 129 44 chr5 99679456 99680485 -103405047 + L1MC4 LINE L1 6614 7812 -230 276 30 0 0 chr5 99680485 99680518 -103405014 + (CA)n Simple_repeat Simple_repeat 2 34 0 4648 199 129 44 chr5 99680518 99680771 -103404761 + L1MC4 LINE L1 7812 8042 0 201 320 105 76 chr5 99681116 99681535 -103403997 + L3 LINE CR1 73 503 -1074 183 80 0 0 chr5 99681917 99681942 -103403590 + (TG)n Simple_repeat Simple_repeat 2 26 0 346 266 11 32 chr5 99682006 99682100 -103403432 - L2 LINE L2 -30 3283 3192 277 311 97 17 chr5 99682101 99682339 -103403193 - L1ME4a LINE L1 -218 5903 5647 367 340 67 5 chr5 99682502 99682696 -103402836 - L1ME4a LINE L1 -690 5472 5267 363 366 78 25 chr5 99682717 99682773 -103402759 + L3 LINE CR1 793 845 -732 198 0 0 0 chr5 99682773 99682795 -103402737 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 261 0 0 0 chr5 99682794 99682823 -103402709 + (CA)n Simple_repeat Simple_repeat 1 29 0 363 366 78 25 chr5 99682795 99683162 -103402370 + L3 LINE CR1 845 1209 -368 276 297 135 9 chr5 99683340 99683451 -103402081 + L3 LINE CR1 1318 1442 -135 23 0 0 0 chr5 99683932 99683955 -103401577 + AT_rich Low_complexity Low_complexity 1 23 0 836 287 172 18 chr5 99684956 99685339 -103400193 - L2 LINE L2 -43 3270 2829 305 269 145 75 chr5 99686223 99686409 -103399123 + MIR3 SINE MIR 1 199 -9 1456 203 27 27 chr5 99686747 99687043 -103398489 + MLT1A2 LTR MaLR 68 363 -11 304 24 0 0 chr5 99687193 99687235 -103398297 + L1PA8 LINE L1 6129 6170 -2 22 70 0 0 chr5 99688103 99688146 -103397386 + AT_rich Low_complexity Low_complexity 1 43 0 239 286 0 0 chr5 99688697 99688753 -103396779 + (TA)n Simple_repeat Simple_repeat 2 57 0 631 343 68 0 chr5 99688954 99689173 -103396359 + MIR SINE MIR 20 253 -9 649 341 26 70 chr5 99689495 99689650 -103395882 - L2 LINE L2 -10 3262 3102 1563 316 79 24 chr5 99689650 99690306 -103395226 - MER115 DNA AcHobo 0 693 2 649 341 26 70 chr5 99690306 99690607 -103394925 - L2 LINE L2 -170 3102 2826 1591 154 16 53 chr5 99695940 99696083 -103389449 + AluSx SINE Alu 1 148 -164 297 0 0 0 chr5 99696083 99696116 -103389416 + (TG)n Simple_repeat Simple_repeat 1 33 0 1591 154 16 53 chr5 99696116 99696290 -103389242 + AluSx SINE Alu 148 306 -6 6138 168 32 12 chr5 99696949 99698553 -103386979 - L1MC1 LINE L1 0 6333 4705 652 262 126 44 chr5 99700814 99701242 -103384290 + MLT2C2 LTR ERVL 2 464 0 230 150 67 17 chr5 99701246 99701306 -103384226 + MLT1J2 LTR MaLR 66 128 -322 23 33 0 0 chr5 99702480 99702510 -103383022 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr5 99704303 99704339 -103381193 + (TAAAAA)n Simple_repeat Simple_repeat 6 41 0 21 36 0 0 chr5 99705632 99705660 -103379872 + AT_rich Low_complexity Low_complexity 1 28 0 721 308 14 4 chr5 99705726 99705954 -103379578 + MIR SINE MIR 34 262 0 481 263 158 0 chr5 99707068 99707220 -103378312 + MIR SINE MIR 86 261 -1 579 244 99 89 chr5 99707419 99707812 -103377720 - L2 LINE L2 -624 2690 2294 258 176 0 0 chr5 99708794 99708845 -103376687 + GA-rich Low_complexity Low_complexity 3 53 0 236 238 0 0 chr5 99709421 99709484 -103376048 + L1MA5 LINE L1 6238 6300 0 915 315 114 16 chr5 99712073 99712704 -103372828 + L2 LINE L2 2630 3313 0 356 329 115 16 chr5 99712906 99713158 -103372374 + L3b LINE CR1 1161 1437 -146 339 293 185 31 chr5 99713659 99713881 -103371651 - MIR SINE MIR 0 262 7 413 288 57 31 chr5 99714308 99714537 -103370995 + L1ME4a LINE L1 5561 5795 -326 347 261 142 0 chr5 99714566 99714784 -103370748 + L1ME4a LINE L1 5869 6117 -4 232 328 38 34 chr5 99715196 99715434 -103370098 + L1M4 LINE L1 4823 5061 -1085 325 262 52 37 chr5 99715637 99715828 -103369704 + L1P5 LINE L1 5276 5462 -689 180 77 0 0 chr5 99716072 99716098 -103369434 + (CA)n Simple_repeat Simple_repeat 2 27 0 279 0 0 0 chr5 99716392 99716423 -103369109 + (TG)n Simple_repeat Simple_repeat 1 31 0 * 417 20 0 0 chr5 99716422 99716472 -103369060 + (GA)n Simple_repeat Simple_repeat 1 50 0 2036 133 133 13 chr5 99716802 99717184 -103368348 - MSTA LTR MaLR 0 428 1 419 242 17 62 chr5 99717789 99717882 -103367650 - MER117 DNA MER1_type -24 173 90 2232 120 0 0 chr5 99717882 99718182 -103367350 - AluSx SINE Alu -12 300 1 419 242 17 62 chr5 99718182 99718266 -103367266 - MER117 DNA MER1_type -107 90 4 271 250 80 23 chr5 99720108 99720196 -103365336 + MIR SINE MIR 170 262 0 4897 202 75 16 chr5 99720642 99721999 -103363533 + Charlie1 DNA MER1_type 4 2747 -14 2454 73 3 0 chr5 99722001 99722302 -103363230 - AluY SINE Alu -9 302 1 312 309 79 40 chr5 99723387 99723539 -103361993 + MIR3 SINE MIR 10 167 -41 2387 50 40 7 chr5 99724005 99724306 -103361226 - AluY SINE Alu 0 311 1 1660 108 7 35 chr5 99725268 99725411 -103360121 - L1MA9 LINE L1 -9 6303 6170 225 0 0 0 chr5 99725411 99725436 -103360096 + (TG)n Simple_repeat Simple_repeat 2 26 0 1660 108 7 35 chr5 99725436 99725580 -103359952 - L1MA9 LINE L1 -142 6170 6024 21 0 0 0 chr5 99725623 99725644 -103359888 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 99726065 99726089 -103359443 + (T)n Simple_repeat Simple_repeat 1 24 0 1700 323 66 56 chr5 99728133 99730027 -103355505 - HERV16 LTR ERVL -20 5350 3237 1629 316 21 5 chr5 99730224 99730824 -103354708 - HERV16 LTR ERVL -1900 3096 2656 1302 324 92 11 chr5 99730937 99731600 -103353932 - HERV16 LTR ERVL -3266 2498 1782 268 349 55 37 chr5 99731699 99731917 -103353615 - HERV16 LTR ERVL -3429 1567 1346 * 686 269 65 5 chr5 99731915 99732101 -103353431 - HERV16 LTR ERVL -3928 1068 872 374 275 11 0 chr5 99732624 99732637 -103352895 + L2 LINE L2 3222 3233 -80 210 118 0 0 chr5 99732637 99732671 -103352861 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 374 275 11 0 chr5 99732671 99732748 -103352784 + L2 LINE L2 3233 3313 0 2820 175 16 16 chr5 99732916 99733431 -103352101 + MLT2B2 LTR ERVL 1 515 0 251 224 0 24 chr5 99736838 99736923 -103348609 + L1MC4 LINE L1 6621 6703 -1339 180 0 0 0 chr5 99736925 99736945 -103348587 + (CA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr5 99737010 99737033 -103348499 + AT_rich Low_complexity Low_complexity 1 23 0 11686 143 42 19 chr5 99737809 99740572 -103344960 + L1PB1 LINE L1 951 3777 -3085 7118 180 11 31 chr5 99740684 99742911 -103342621 + L1PB1 LINE L1 4331 6507 -360 303 93 0 0 chr5 99742911 99742954 -103342578 + (TA)n Simple_repeat Simple_repeat 1 43 0 288 0 0 0 chr5 99742957 99742989 -103342543 + (CA)n Simple_repeat Simple_repeat 2 33 0 2159 132 8 11 chr5 99742989 99743346 -103342186 + L1PB1 LINE L1 6507 6862 -5 2186 84 10 14 chr5 99743417 99743713 -103341819 + AluSc SINE Alu 1 295 -14 375 308 49 100 chr5 99745507 99746039 -103339493 + L1M4 LINE L1 2302 2806 -3340 254 247 79 0 chr5 99746169 99746258 -103339274 + L1ME LINE L1 5771 5866 -255 1199 303 82 19 chr5 99747140 99747605 -103337927 + Charlie2b DNA MER1_type 170 663 -2119 1716 254 86 13 chr5 99747678 99748303 -103337229 + Charlie2a DNA MER1_type 1485 2155 -707 1776 157 11 4 chr5 99748306 99748586 -103336946 + AluSx SINE Alu 5 286 -26 326 238 41 17 chr5 99748597 99748769 -103336763 + (TA)n Simple_repeat Simple_repeat 2 177 0 331 253 22 33 chr5 99748769 99748860 -103336672 - L1MC4 LINE L1 -1339 6703 6614 4242 60 16 2 chr5 99748917 99749465 -103336067 + L1PA7 LINE L1 5586 6141 -13 1240 213 84 30 chr5 99749488 99749986 -103335546 + Charlie2a DNA MER1_type 2285 2809 -53 1932 121 17 13 chr5 99750553 99750886 -103334646 - AluSq SINE Alu 0 313 1 555 252 70 58 chr5 99751004 99751246 -103334286 - L1ME3 LINE L1 -31 6131 5887 475 237 53 12 chr5 99751251 99751420 -103334112 + L1M4 LINE L1 5195 5370 -776 24 32 0 0 chr5 99751691 99751722 -103333810 + AT_rich Low_complexity Low_complexity 1 31 0 248 167 0 19 chr5 99751967 99752021 -103333511 + CT-rich Low_complexity Low_complexity 4 56 0 222 343 120 0 chr5 99752169 99752277 -103333255 - L2 LINE L2 -1 3271 3151 42374 38 25 2 chr5 99752277 99758286 -103327246 + L1PA5 LINE L1 2 6154 0 1075 147 0 0 chr5 99758626 99758782 -103326750 - AluSg/x SINE Alu -21 291 136 287 312 93 68 chr5 99758913 99759365 -103326167 + L2 LINE L2 2620 3080 -192 1055 308 58 25 chr5 99759367 99760066 -103325466 - L2 LINE L2 -2 3311 2587 311 342 72 0 chr5 99760142 99760253 -103325279 + L2 LINE L2 3154 3272 0 22627 35 1 0 chr5 99760331 99763857 -103321675 + L1PA2 LINE L1 2630 6153 -2 287 196 63 0 chr5 99763861 99763957 -103321575 - L1ME3 LINE L1 -383 5779 5678 7467 23 0 2 chr5 99766311 99767423 -103318109 + L1HS LINE L1 5010 6118 -37 22 0 0 0 chr5 99767913 99767935 -103317597 + AT_rich Low_complexity Low_complexity 1 22 0 245 313 16 8 chr5 99767985 99768113 -103317419 + L1ME3A LINE L1 3546 3674 -2472 256 297 88 22 chr5 99768244 99768426 -103317106 + L1ME3A LINE L1 4801 4994 -1152 332 274 124 21 chr5 99768427 99768661 -103316871 + L1ME3A LINE L1 4947 5204 -942 418 290 39 42 chr5 99769080 99769363 -103316169 + L1ME3A LINE L1 5659 5940 -230 21 0 0 0 chr5 99769397 99769418 -103316114 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 99769687 99769723 -103315809 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 99770036 99770066 -103315466 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 99770570 99770593 -103314939 + AT_rich Low_complexity Low_complexity 1 23 0 223 393 39 8 chr5 99770944 99771119 -103314413 + MIR SINE MIR 17 208 -54 331 321 143 0 chr5 99771193 99771333 -103314199 + MIR SINE MIR 47 206 -56 22 35 0 0 chr5 99771469 99771498 -103314034 + AT_rich Low_complexity Low_complexity 1 29 0 838 330 35 40 chr5 99771916 99772452 -103313080 - L2 LINE L2 -34 3279 2750 231 61 0 0 chr5 99774720 99774753 -103310779 + (T)n Simple_repeat Simple_repeat 1 33 0 222 37 0 0 chr5 99775372 99775399 -103310133 + (CA)n Simple_repeat Simple_repeat 2 28 0 279 0 0 0 chr5 99776242 99776273 -103309259 + (T)n Simple_repeat Simple_repeat 1 31 0 332 260 59 77 chr5 99776965 99777134 -103308398 + MER69A DNA AcHobo 9 174 -3 417 295 29 0 chr5 99777565 99777670 -103307862 - MIR SINE MIR -81 181 74 485 278 72 25 chr5 99777742 99778019 -103307513 + L1ME4a LINE L1 5539 5828 -293 24 77 0 0 chr5 99778029 99778081 -103307451 + AT_rich Low_complexity Low_complexity 1 52 0 2086 128 3 3 chr5 99778381 99778679 -103306853 + AluSx SINE Alu 1 298 -14 351 0 0 0 chr5 99779321 99779360 -103306172 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 186 43 0 0 chr5 99779367 99779390 -103306142 + (GA)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr5 99780251 99780282 -103305250 + AT_rich Low_complexity Low_complexity 1 31 0 687 293 24 12 chr5 99780850 99781099 -103304433 + L1ME LINE L1 5384 5635 -527 238 282 165 0 chr5 99781112 99781197 -103304335 + MLT1I LTR MaLR 27 125 -284 366 269 14 38 chr5 99781310 99781498 -103304034 + MLT1I LTR MaLR 272 409 0 406 281 41 25 chr5 99781738 99781859 -103303673 + L2 LINE L2 3191 3313 0 375 310 39 0 chr5 99782084 99782213 -103303319 + MIR SINE MIR 121 254 -8 219 69 0 0 chr5 99782219 99782248 -103303284 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4668 96 7 9 chr5 99782769 99783456 -103302076 + L1PB2 LINE L1 5463 6148 -3 21 36 0 0 chr5 99784462 99784490 -103301042 + AT_rich Low_complexity Low_complexity 1 28 0 7225 169 16 15 chr5 99785348 99787708 -103297824 + L1PB2 LINE L1 3769 6146 -5 21 0 0 0 chr5 99787710 99787731 -103297801 + AT_rich Low_complexity Low_complexity 1 21 0 184 203 228 13 chr5 99788644 99788723 -103296809 - MIR SINE MIR -81 127 32 3538 186 18 18 chr5 99788763 99789483 -103296049 + L1MB7 LINE L1 5447 6166 -18 30080 118 9 61 chr5 99789560 99796051 -103289481 + L1PA7 LINE L1 12 6154 0 1062 244 67 61 chr5 99796053 99796609 -103288923 - MLT1G1 LTR MaLR -52 543 1 194 136 23 0 chr5 99797173 99797217 -103288315 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 481 302 127 29 chr5 99797326 99797703 -103287829 - MLT1J2 LTR MaLR 0 450 37 42534 51 7 0 chr5 99797947 99804046 -103281486 - L1PA4 LINE L1 0 6155 18 330 294 210 5 chr5 99804696 99804910 -103280622 - MIR SINE MIR 0 262 5 1888 134 24 3 chr5 99804940 99805232 -103280300 + AluSx SINE Alu 1 298 -14 237 33 0 0 chr5 99805408 99805438 -103280094 + (TC)n Simple_repeat Simple_repeat 1 30 0 192 40 0 0 chr5 99805437 99805462 -103280070 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1418 264 68 46 chr5 99808493 99809046 -103276486 + MER77 LTR ERV1 1 601 -4 32 43 0 0 chr5 99810034 99810080 -103275452 + AT_rich Low_complexity Low_complexity 1 46 0 471 371 9 14 chr5 99810797 99811018 -103274514 + MIR SINE MIR 36 255 -7 1891 171 0 7 chr5 99811218 99811523 -103274009 + AluJo SINE Alu 1 303 -9 231 93 19 37 chr5 99811723 99811777 -103273755 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 1997 159 24 39 chr5 99811829 99812216 -103273316 + MLT1B LTR MaLR 1 396 0 704 268 46 54 chr5 99812247 99812508 -103273024 + MIR SINE MIR 1 259 -3 889 245 78 25 chr5 99812862 99813107 -103272425 - MIR SINE MIR -2 260 3 2220 94 7 0 chr5 99813513 99813799 -103271733 + AluY SINE Alu 1 288 -23 2796 138 66 23 chr5 99814262 99814778 -103270754 + LTR64 LTR ERVK 1 538 -20 202 244 0 0 chr5 99814951 99814996 -103270536 + A-rich Low_complexity Low_complexity 1 45 0 206 81 27 0 chr5 99815329 99815366 -103270166 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 747 141 178 181 chr5 99815786 99816090 -103269442 + AluSp SINE Alu 1 303 0 816 308 13 4 chr5 99816341 99816575 -103268957 + MIR SINE MIR 21 256 -6 2593 63 0 0 chr5 99816859 99817193 -103268339 - L1PA5 LINE L1 -1169 4977 4644 7269 51 0 1 chr5 99817193 99818343 -103267189 + L1PA5 LINE L1 5006 6154 0 1075 147 0 0 chr5 99818683 99818839 -103266693 - AluSg/x SINE Alu -21 291 136 287 312 93 68 chr5 99818970 99819422 -103266110 + L2 LINE L2 2620 3080 -192 1107 314 58 16 chr5 99819424 99820121 -103265411 - L2 LINE L2 -2 3311 2587 311 342 72 0 chr5 99820197 99820308 -103265224 + L2 LINE L2 3154 3272 0 22659 34 0 0 chr5 99820386 99823912 -103261620 + L1PA3 LINE L1 2630 6152 -3 21 0 0 0 chr5 99823912 99823933 -103261599 + AT_rich Low_complexity Low_complexity 1 21 0 1747 214 37 45 chr5 99824333 99824842 -103260690 - MLT1D LTR MaLR 0 505 1 183 129 0 0 chr5 99825147 99825178 -103260354 + (CA)n Simple_repeat Simple_repeat 2 32 0 345 297 214 19 chr5 99825281 99825604 -103259928 + L1ME4a LINE L1 5481 5866 -255 1199 303 82 19 chr5 99826486 99826951 -103258581 + Charlie2b DNA MER1_type 170 663 -2119 1759 248 96 0 chr5 99827024 99827585 -103257947 + Charlie2a DNA MER1_type 1485 2099 -763 1664 177 7 4 chr5 99827652 99827953 -103257579 + AluSx SINE Alu 5 306 0 321 235 40 13 chr5 99827973 99828122 -103257410 + (TA)n Simple_repeat Simple_repeat 2 154 0 331 253 22 33 chr5 99828122 99828213 -103257319 - L1MC4 LINE L1 -1339 6703 6614 4246 62 16 0 chr5 99828272 99828819 -103256713 + L1PA7 LINE L1 5586 6141 -13 1227 215 84 30 chr5 99828842 99829340 -103256192 + Charlie2a DNA MER1_type 2285 2809 -53 1932 121 17 13 chr5 99829907 99830240 -103255292 - AluSq SINE Alu 0 313 1 555 252 70 58 chr5 99830358 99830600 -103254932 - L1ME3 LINE L1 -31 6131 5887 475 237 53 12 chr5 99830605 99830774 -103254758 + L1M4 LINE L1 5195 5370 -776 24 32 0 0 chr5 99831045 99831076 -103254456 + AT_rich Low_complexity Low_complexity 1 31 0 248 167 0 19 chr5 99831321 99831375 -103254157 + CT-rich Low_complexity Low_complexity 4 56 0 222 343 120 0 chr5 99831523 99831631 -103253901 - L2 LINE L2 -1 3271 3151 42435 33 25 1 chr5 99831631 99837639 -103247893 + L1PA2 LINE L1 2 6153 -2 287 196 63 0 chr5 99837643 99837739 -103247793 - L1ME3 LINE L1 -383 5779 5678 438 273 93 29 chr5 99838797 99838969 -103246563 + MER5A DNA MER1_type 7 189 0 1576 209 138 35 chr5 99839615 99840070 -103245462 - MLT1D LTR MaLR -3 502 1 684 286 148 65 chr5 99840499 99841006 -103244526 + MLT1H LTR MaLR 1 549 0 494 257 79 11 chr5 99841312 99841645 -103243887 + L1ME4a LINE L1 5728 6120 -1 16794 165 30 19 chr5 99841939 99842143 -103243389 + L1MA5A LINE L1 1 201 -6812 2373 78 7 0 chr5 99842143 99842437 -103243095 + AluY SINE Alu 1 296 -15 16794 165 30 19 chr5 99842437 99844069 -103241463 + L1MA5A LINE L1 201 1813 -5200 2866 10 0 0 chr5 99844069 99844379 -103241153 - AluYb8 SINE Alu -8 310 1 16794 165 30 19 chr5 99844379 99847599 -103237933 + L1MA5A LINE L1 1813 5185 -1828 180 0 0 0 chr5 99847599 99847619 -103237913 + (CAA)n Simple_repeat Simple_repeat 2 21 0 16794 165 30 19 chr5 99847619 99849105 -103236427 + L1MA5A LINE L1 5185 6653 -360 2157 107 7 3 chr5 99849003 99849311 -103236221 + L1PB2 LINE L1 6552 6860 -7 * 23 54 0 0 chr5 99849372 99849409 -103236123 + AT_rich Low_complexity Low_complexity 1 37 0 717 256 79 7 chr5 99849414 99849793 -103235739 + L1MC4 LINE L1 6285 6613 -1195 * 1382 230 50 46 chr5 99849774 99850253 -103235279 + L1MC4a LINE L1 7328 7808 0 219 167 0 24 chr5 99850864 99850906 -103234626 + T-rich Low_complexity Low_complexity 5 45 0 379 149 103 0 chr5 99850907 99850994 -103234538 - L1MB2 LINE L1 -1 6170 6075 228 328 45 0 chr5 99852258 99852325 -103233207 + L2 LINE L2 3153 3222 -50 184 200 0 25 chr5 99852641 99852681 -103232851 - L3 LINE CR1 -113 1464 1426 450 345 114 30 chr5 99852731 99853160 -103232372 - L2 LINE L2 -1 3312 2848 232 189 27 0 chr5 99854503 99854577 -103230955 + (TA)n Simple_repeat Simple_repeat 1 76 0 1450 140 18 110 chr5 99855644 99855775 -103229757 + AluJo SINE Alu 4 145 -167 2106 111 40 0 chr5 99855775 99856073 -103229459 + AluSx SINE Alu 1 310 -2 1450 140 18 110 chr5 99856073 99856085 -103229447 + AluJo SINE Alu 145 157 -155 2299 72 0 56 chr5 99856085 99856406 -103229126 + AluY SINE Alu 1 303 -8 1450 140 18 110 chr5 99856406 99856589 -103228943 + AluJo SINE Alu 157 301 -11 25 51 0 0 chr5 99857120 99857159 -103228373 + AT_rich Low_complexity Low_complexity 1 39 0 271 149 0 0 chr5 99859048 99859095 -103226437 - MADE1 DNA Mariner -33 47 1 2630 23 0 7 chr5 99860073 99860375 -103225157 + AluY SINE Alu 1 300 -11 6526 109 15 138 chr5 99861491 99862372 -103223160 - L1P LINE L1 -1649 4497 3509 645 60 0 0 chr5 99862372 99862456 -103223076 - L1PA5 LINE L1 0 6154 6071 6526 109 15 138 chr5 99862456 99862561 -103222971 - L1P LINE L1 -2637 3509 3393 1216 76 19 0 chr5 99862561 99862718 -103222814 - AluY SINE Alu -5 306 147 6526 109 15 138 chr5 99862718 99862980 -103222552 - L1P LINE L1 -2753 3393 3265 630 173 0 0 chr5 99862980 99863084 -103222448 + L1PA8A LINE L1 4502 4605 -1541 6065 83 23 6 chr5 99863088 99864480 -103221052 + L1PA8A LINE L1 4710 6124 -7 250 286 199 9 chr5 99864570 99864801 -103220731 + HAL1 LINE L1 2047 2321 -186 363 227 253 32 chr5 99865490 99865644 -103219888 + MER5A DNA MER1_type 1 188 -1 415 282 36 0 chr5 99865656 99865766 -103219766 + MIR SINE MIR 76 189 -73 31 58 0 0 chr5 99865795 99865847 -103219685 + AT_rich Low_complexity Low_complexity 1 52 0 716 257 6 11 chr5 99866979 99867158 -103218374 - MER5B DNA MER1_type 0 178 1 197 240 20 0 chr5 99867271 99867321 -103218211 + L2 LINE L2 3009 3059 -213 1048 247 0 36 chr5 99867578 99867829 -103217703 + MIR SINE MIR 21 262 0 1938 94 59 17 chr5 99870040 99870328 -103215204 - AluSg SINE Alu -10 300 1 511 165 18 0 chr5 99871604 99871713 -103213819 + CT-rich Low_complexity Low_complexity 3 113 0 207 69 0 0 chr5 99872083 99872112 -103213420 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1958 120 0 55 chr5 99872492 99872800 -103212732 - AluSq SINE Alu -20 293 3 248 328 105 12 chr5 99872974 99873145 -103212387 + L2 LINE L2 2583 2769 -545 5079 123 13 10 chr5 99873249 99874027 -103211505 - LTR17 LTR ERV1 0 780 1 1858 81 0 133 chr5 99874961 99875308 -103210224 + AluSg SINE Alu 10 310 0 219 343 78 0 chr5 99877252 99877354 -103208178 + L2 LINE L2 3151 3260 -12 11417 180 28 12 chr5 99877431 99879620 -103205912 + L1M1 LINE L1 13 2236 -5329 2636 26 0 3 chr5 99880031 99880333 -103205199 + AluY SINE Alu 1 301 -10 6097 109 15 139 chr5 99881449 99882330 -103203202 - L1P LINE L1 -1649 4497 3509 642 60 0 0 chr5 99882330 99882414 -103203118 - L1PA5 LINE L1 0 6154 6071 6097 109 15 139 chr5 99882414 99882519 -103203013 - L1P LINE L1 -2637 3509 3393 1207 82 19 0 chr5 99882519 99882677 -103202855 - AluY SINE Alu -4 307 147 6097 109 15 139 chr5 99882677 99882939 -103202593 - L1P LINE L1 -2753 3393 3265 598 173 0 0 chr5 99882939 99883043 -103202489 + L1PA8A LINE L1 4502 4605 -1541 4159 109 21 2 chr5 99883047 99883961 -103201571 + L1PA8A LINE L1 4710 5637 -494 4930 102 14 1 chr5 99883961 99884673 -103200859 + L1PA10 LINE L1 5444 6164 -4 21 36 0 0 chr5 99885150 99885178 -103200354 + AT_rich Low_complexity Low_complexity 1 28 0 233 29 0 29 chr5 99885929 99885964 -103199568 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 751 325 30 4 chr5 99886818 99887052 -103198480 - MIR SINE MIR -14 248 9 4333 191 21 6 chr5 99887728 99889640 -103195892 + L1PA16 LINE L1 4182 6157 -9 229 402 105 20 chr5 99891302 99891645 -103193887 - L2 LINE L2 -9 3263 2892 743 345 136 17 chr5 99891957 99892612 -103192920 - L2 LINE L2 -805 2509 1777 562 174 9 0 chr5 99892635 99892744 -103192788 + MLT1C LTR MaLR 8 117 -350 * 1268 169 51 18 chr5 99892740 99893013 -103192519 - MLT1C LTR MaLR -185 282 1 39 22 0 0 chr5 99893045 99893091 -103192441 + AT_rich Low_complexity Low_complexity 1 46 0 413 273 15 38 chr5 99893100 99893232 -103192300 - MIR3 SINE MIR -76 132 4 * 442 350 95 48 chr5 99893232 99893734 -103191798 + L2 LINE L2 2734 3266 -6 764 277 89 42 chr5 99893830 99894191 -103191341 + L2 LINE L2 2936 3313 0 2174 119 7 0 chr5 99895853 99896156 -103189376 + AluSx SINE Alu 1 305 -7 350 323 131 45 chr5 99896461 99896659 -103188873 + L2 LINE L2 2566 2780 -534 2228 116 0 7 chr5 99896852 99897155 -103188377 + AluSg SINE Alu 1 301 -9 22 56 0 0 chr5 99897235 99897271 -103188261 + AT_rich Low_complexity Low_complexity 1 36 0 200 188 0 0 chr5 99897862 99897894 -103187638 + polypurine Low_complexity Low_complexity 1 32 0 270 233 42 17 chr5 99899476 99899596 -103185936 + (TA)n Simple_repeat Simple_repeat 1 123 0 249 314 137 34 chr5 99899993 99900168 -103185364 - MIR SINE MIR -36 226 34 261 75 0 25 chr5 99900322 99900362 -103185170 + U6 snRNA snRNA 1 39 -68 350 262 272 5 chr5 99902863 99903065 -103182467 + MIR SINE MIR 1 256 -6 2218 105 0 0 chr5 99903269 99903555 -103181977 - AluSc SINE Alu -23 286 1 287 303 9 9 chr5 99903555 99903664 -103181868 + MIR SINE MIR 148 256 -6 420 329 68 38 chr5 99903934 99904171 -103181361 - MIR SINE MIR -17 245 2 263 228 0 0 chr5 99907065 99907122 -103178410 - L2 LINE L2 -1 3312 3256 414 259 0 0 chr5 99907183 99907268 -103178264 + FRAM/FAM SINE Alu 1 85 -91 191 362 158 20 chr5 99907384 99907630 -103177902 - L2 LINE L2 -671 2643 2364 194 234 128 89 chr5 99907859 99908094 -103177438 - L2 LINE L2 -1220 2094 1851 203 293 61 24 chr5 99908739 99908821 -103176711 + L2 LINE L2 3188 3272 0 22 35 0 0 chr5 99909035 99909064 -103176468 + AT_rich Low_complexity Low_complexity 1 29 0 490 252 211 23 chr5 99911117 99911335 -103174197 - MIR SINE MIR 0 262 4 271 292 21 0 chr5 99911455 99911551 -103173981 + CT-rich Low_complexity Low_complexity 2 99 0 1901 156 3 47 chr5 99911555 99911876 -103173656 - AluJb SINE Alu 0 312 6 944 202 56 146 chr5 99912142 99912553 -103172979 + MLT1A2 LTR MaLR 1 374 0 1479 129 64 131 chr5 99913959 99914332 -103171200 - MER7A DNA MER2_type 0 346 1 6265 175 78 20 chr5 99914332 99915646 -103169886 - MER52A LTR ERV1 0 1755 365 946 172 0 73 chr5 99915644 99915876 -103169656 - MER52A LTR ERV1 -1540 215 1 * 2664 66 9 0 chr5 99916055 99916403 -103169129 - L1PA7 LINE L1 0 6154 5804 204 260 26 39 chr5 99917312 99917389 -103168143 - MIR SINE MIR -51 211 136 209 159 16 0 chr5 99917713 99917776 -103167756 + T-rich Low_complexity Low_complexity 2 65 0 514 16 0 0 chr5 99918046 99918109 -103167423 - HERVL-A2 LTR ERVL -5591 63 1 3276 78 39 0 chr5 99918109 99918545 -103166987 - MLT2A2 LTR ERVL 0 453 1 349 271 0 0 chr5 99919435 99919505 -103166027 + L2 LINE L2 3203 3272 0 209 235 221 0 chr5 99920168 99920236 -103165296 + MIR3 SINE MIR 125 207 -1 522 319 44 62 chr5 99920723 99920996 -103164536 - L2 LINE L2 -8 3264 2997 491 266 21 36 chr5 99921095 99921287 -103164245 + MER5A DNA MER1_type 1 189 0 230 73 24 0 chr5 99922305 99922346 -103163186 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 373 268 76 50 chr5 99922369 99922567 -103162965 + MIR SINE MIR 24 226 -36 262 283 174 87 chr5 99923170 99923307 -103162225 + MIR SINE MIR 1 125 -137 1943 144 24 42 chr5 99923307 99923689 -103161843 + THE1C LTR MaLR 1 375 0 262 283 174 87 chr5 99923689 99923781 -103161751 + MIR SINE MIR 125 250 -12 393 154 0 2 chr5 99923857 99923933 -103161599 - MLT1A1 LTR MaLR -228 137 71 1092 197 20 47 chr5 99924002 99924238 -103161294 + MLT1A1 LTR MaLR 74 302 -63 2008 98 0 4 chr5 99924238 99924514 -103161018 + AluY SINE Alu 21 295 -16 1092 197 20 47 chr5 99924514 99924577 -103160955 + MLT1A1 LTR MaLR 302 365 0 253 90 104 45 chr5 99925012 99925079 -103160453 + (TTTAA)n Simple_repeat Simple_repeat 3 73 0 39648 60 5 0 chr5 99925118 99931232 -103154300 + L1PA5 LINE L1 11 6154 0 241 388 19 0 chr5 99931244 99931347 -103154185 - MIR SINE MIR -111 151 47 573 335 6 11 chr5 99931774 99931953 -103153579 + MER5B DNA MER1_type 1 178 0 302 266 16 0 chr5 99933047 99933111 -103152421 - L2 LINE L2 -7 3265 3201 41133 30 21 2 chr5 99933313 99939350 -103146182 + L1HS LINE L1 1 6155 0 240 35 0 0 chr5 99939363 99939392 -103146140 + (A)n Simple_repeat Simple_repeat 1 29 0 209 300 178 0 chr5 99940219 99940309 -103145223 + MIR SINE MIR 45 150 -112 849 261 110 85 chr5 99940320 99941034 -103144498 + L2 LINE L2 2554 3292 -21 1003 271 113 36 chr5 99941458 99941963 -103143569 + MLT1H1 LTR MaLR 1 544 -11 364 200 0 0 chr5 99942252 99942317 -103143215 + MER58 DNA MER1_type 2356 2420 0 822 258 47 0 chr5 99942657 99942870 -103142662 - MER58A DNA MER1_type 0 224 2 23 68 0 0 chr5 99944660 99944704 -103140828 + AT_rich Low_complexity Low_complexity 1 44 0 787 283 112 27 chr5 99948657 99949032 -103136500 + MLT1I LTR MaLR 1 407 -2 325 224 178 2 chr5 99949312 99949449 -103136083 - MIR SINE MIR -30 178 17 351 0 0 0 chr5 99949789 99949828 -103135704 + (TG)n Simple_repeat Simple_repeat 1 39 0 342 45 0 0 chr5 99951799 99951843 -103133689 + (CA)n Simple_repeat Simple_repeat 1 44 0 772 219 146 5 chr5 99951968 99952160 -103133372 + MER20 DNA MER1_type 1 219 0 1521 162 65 14 chr5 99952204 99952482 -103133050 + AluJb SINE Alu 1 292 -20 450 293 49 53 chr5 99953147 99953372 -103132160 - LTR16B LTR ERVL -236 228 5 181 204 41 41 chr5 99954018 99954067 -103131465 + L3 LINE CR1 1524 1572 -5 486 239 0 2 chr5 99955527 99955638 -103129894 + MLT1J LTR MaLR 51 196 -291 199 279 73 15 chr5 99956552 99956620 -103128912 - L2 LINE L2 0 3272 3201 201 367 132 9 chr5 99956676 99957003 -103128529 + L2 LINE L2 1992 2358 -956 498 314 64 24 chr5 99957867 99958289 -103127243 - LTR67 LTR ERVL -93 464 2 789 296 88 43 chr5 99959207 99960184 -103125348 + HAL1 LINE L1 764 1784 -723 14391 123 41 17 chr5 99960354 99961249 -103124283 + L1PA2 LINE L1 2907 3778 -2377 2294 82 0 36 chr5 99961249 99961554 -103123978 + AluY SINE Alu 1 294 -17 14391 123 41 17 chr5 99961554 99963673 -103121859 + L1PA2 LINE L1 3778 6006 -149 21438 39 0 0 chr5 100013673 100016325 -103069207 - L1P LINE L1 -2442 3704 1053 13140 27 0 15 chr5 100016427 100018755 -103066777 + L1PA2 LINE L1 3838 6151 -4 1558 237 45 8 chr5 100018764 100019279 -103066253 + L1MB3 LINE L1 3073 3606 -2540 2535 218 6 20 chr5 100019280 100019775 -103065757 - LTR42 LTR ERVL -7 488 1 2702 180 36 40 chr5 100019775 100020393 -103065139 + L1MB3 LINE L1 3602 4216 -1930 7568 154 21 6 chr5 100020401 100021678 -103063854 - HSMAR2 DNA Mariner -5 1297 2 4652 189 26 35 chr5 100021681 100023666 -103061866 + L1MB3 LINE L1 4220 6183 0 191 111 0 0 chr5 100023698 100023725 -103061807 + (GGA)n Simple_repeat Simple_repeat 3 29 0 702 269 68 26 chr5 100023917 100024151 -103061381 + MIR SINE MIR 9 252 -10 1397 173 0 9 chr5 100026106 100026332 -103059200 - AluJb SINE Alu -88 224 1 270 319 25 25 chr5 100026513 100026670 -103058862 + MER103 DNA DNA 7 163 -3 360 257 79 10 chr5 100026748 100026873 -103058659 - MIR SINE MIR -63 145 45 23 33 0 0 chr5 100027385 100027415 -103058117 + AT_rich Low_complexity Low_complexity 1 30 0 354 279 88 31 chr5 100028451 100028677 -103056855 + LTR16C LTR ERVL 237 475 -16 591 240 98 95 chr5 100028685 100029437 -103056095 - LTR41 LTR ERVL 0 795 25 309 326 87 14 chr5 100029911 100030049 -103055483 + MIR SINE MIR 37 184 -78 276 257 0 81 chr5 100030068 100030142 -103055390 - L2 LINE L2 0 3313 3246 192 305 134 13 chr5 100030595 100030714 -103054818 - MIR SINE MIR -65 143 15 22 0 0 0 chr5 100030882 100030904 -103054628 + AT_rich Low_complexity Low_complexity 1 22 0 290 87 22 0 chr5 100031773 100031819 -103053713 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 57 0 0 chr5 100035146 100035181 -103050351 + AT_rich Low_complexity Low_complexity 1 35 0 408 200 0 0 chr5 100035802 100035897 -103049635 + GA-rich Low_complexity Low_complexity 4 98 0 704 296 45 45 chr5 100036044 100036399 -103049133 - L2 LINE L2 -10 3303 2949 26 64 0 0 chr5 100036795 100036842 -103048690 + AT_rich Low_complexity Low_complexity 1 47 0 296 266 8 89 chr5 100037123 100037247 -103048285 + MIR3 SINE MIR 68 181 -27 449 330 81 6 chr5 100037564 100037737 -103047795 + MIR SINE MIR 20 205 -57 348 262 0 12 chr5 100038301 100038385 -103047147 + MER5A DNA MER1_type 9 91 -98 13413 164 29 57 chr5 100038898 100041954 -103043578 + L1M4c LINE L1 13 2959 -3423 2156 122 0 0 chr5 100041954 100042248 -103043284 - AluSx SINE Alu -18 294 1 13413 164 29 57 chr5 100042248 100042601 -103042931 + L1M4c LINE L1 2959 3320 -3062 5948 51 152 9 chr5 100042610 100043466 -103042066 + L1P LINE L1 3 980 -5166 329 295 16 47 chr5 100043649 100043798 -103041734 - MIR3 SINE MIR -23 185 37 232 431 54 0 chr5 100043780 100043947 -103041585 + L2 LINE L2 3091 3266 -6 * 362 257 53 35 chr5 100045507 100045620 -103039912 - MER5B DNA MER1_type -63 115 1 406 294 26 26 chr5 100046511 100046664 -103038868 + MER63A DNA MER1_type 58 210 0 28 95 0 0 chr5 100048104 100048188 -103037344 + AT_rich Low_complexity Low_complexity 1 84 0 36057 65 10 2 chr5 100049934 100055465 -103030067 + L1PA5 LINE L1 578 6148 -6 726 155 39 8 chr5 100055493 100055622 -103029910 + AluSq/x SINE Alu 1 133 -180 221 250 39 0 chr5 100056460 100056512 -103029020 - MIR3 SINE MIR -28 180 127 321 396 46 38 chr5 100057382 100057622 -103027910 - L2 LINE L2 -51 3221 2980 290 273 13 26 chr5 100057922 100057999 -103027533 + MER20B DNA MER1_type 65 140 -643 1608 240 86 12 chr5 100058059 100058538 -103026994 + MER20B DNA MER1_type 237 750 -33 2480 80 0 0 chr5 100058546 100058857 -103026675 + AluY SINE Alu 1 311 0 426 299 39 0 chr5 100059630 100059784 -103025748 + MIR SINE MIR 82 241 -21 1044 190 10 5 chr5 100060655 100060855 -103024677 + L1PB4 LINE L1 5949 6149 -7 350 70 56 0 chr5 100060876 100060947 -103024585 + (TA)n Simple_repeat Simple_repeat 2 76 0 232 257 179 0 chr5 100061835 100061975 -103023557 - MER34C LTR ERV1 -83 502 338 1625 348 76 13 chr5 100062255 100063370 -103022162 - HERVL LTR ERVL -2878 2776 1626 1176 180 65 13 chr5 100063388 100063815 -103021717 - LTR54 LTR ERV1 0 510 1 322 221 0 0 chr5 100063821 100063889 -103021643 + L1M4 LINE L1 5019 5086 -1060 2158 178 5 15 chr5 100063894 100064299 -103021233 - MER57A LTR ERV1 -2 401 1 549 224 0 22 chr5 100064299 100064433 -103021099 - MER57A-int LTR ERV1 0 7537 7407 860 204 102 49 chr5 100064433 100064718 -103020814 - LTR54 LTR ERV1 -210 300 1 1642 174 25 11 chr5 100064718 100064999 -103020533 - MER57A-int LTR ERV1 -393 7144 6860 265 297 74 61 chr5 100065177 100065348 -103020184 - MIR SINE MIR -66 142 17 276 279 20 112 chr5 100065437 100065634 -103019898 + L3 LINE CR1 963 1141 -436 316 332 96 48 chr5 100066608 100066858 -103018674 + L3 LINE CR1 1307 1568 -9 254 243 27 14 chr5 100067686 100067760 -103017772 - MIR SINE MIR -6 256 182 219 315 0 27 chr5 100068247 100068320 -103017212 - L2 LINE L2 -561 2753 2683 199 328 140 12 chr5 100068329 100068500 -103017032 - L2 LINE L2 -741 2573 2381 290 98 20 0 chr5 100068743 100068794 -103016738 + (TC)n Simple_repeat Simple_repeat 2 53 0 856 335 68 25 chr5 100069675 100070372 -103015160 + L2 LINE L2 2516 3235 -37 2182 125 0 0 chr5 100071929 100072226 -103013306 + AluSx SINE Alu 1 297 -15 305 186 14 0 chr5 100073300 100073370 -103012162 + (TA)n Simple_repeat Simple_repeat 1 71 0 212 234 16 16 chr5 100073556 100073620 -103011912 + (TA)n Simple_repeat Simple_repeat 2 65 0 393 75 0 0 chr5 100073627 100073680 -103011852 + (TG)n Simple_repeat Simple_repeat 2 54 0 276 149 0 0 chr5 100073680 100073727 -103011805 + (TA)n Simple_repeat Simple_repeat 1 47 0 518 314 65 6 chr5 100078211 100078380 -103007152 - MIR3 SINE MIR 0 208 30 * 706 241 58 6 chr5 100078376 100078550 -103006982 - MER5A DNA MER1_type -6 183 1 28 29 0 0 chr5 100079231 100079266 -103006266 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr5 100080605 100080642 -103004890 + (TG)n Simple_repeat Simple_repeat 1 37 0 213 39 0 0 chr5 100080641 100080667 -103004865 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 404 259 135 29 chr5 100081286 100081456 -103004076 - MIR3 SINE MIR -7 201 14 1544 156 26 22 chr5 100082964 100083233 -103002299 + AluJo SINE Alu 6 275 -37 330 67 0 0 chr5 100085240 100085285 -103000247 + (TA)n Simple_repeat Simple_repeat 1 45 0 2504 163 54 4 chr5 100087803 100088269 -102997263 + L1MB5 LINE L1 5572 6060 -114 592 151 0 21 chr5 100088269 100088362 -102997170 + AluJ/FLAM SINE Alu 1 91 -221 240 264 0 0 chr5 100088397 100088450 -102997082 - MER113 DNA MER1_type? -9 512 460 1670 174 13 17 chr5 100088576 100088875 -102996657 + AluJo SINE Alu 1 298 -14 548 142 26 18 chr5 100088891 100089004 -102996528 + L1MB3 LINE L1 6070 6183 0 358 287 39 0 chr5 100089348 100089477 -102996055 - MER94 DNA DNA 0 134 1 812 246 44 5 chr5 100092651 100092854 -102992678 + MIR SINE MIR 52 262 0 30 0 0 0 chr5 100093096 100093126 -102992406 + AT_rich Low_complexity Low_complexity 1 30 0 645 219 0 8 chr5 100093127 100093250 -102992282 - FLAM_A SINE Alu -11 122 1 437 282 110 14 chr5 100093469 100093678 -102991854 + L2 LINE L2 2358 2586 -728 270 266 166 36 chr5 100093688 100093827 -102991705 + MER5A DNA MER1_type 33 189 0 * 706 322 126 44 chr5 100093827 100094442 -102991090 + L2 LINE L2 2583 3263 -50 1993 125 32 0 chr5 100094443 100094744 -102990788 + AluSq SINE Alu 1 313 0 46 54 0 0 chr5 100094785 100094859 -102990673 + AT_rich Low_complexity Low_complexity 1 74 0 1462 194 8 0 chr5 100095086 100095349 -102990183 - AluJb SINE Alu -5 307 43 227 209 132 22 chr5 100095781 100095872 -102989660 - Tigger1 DNA MER2_type -1503 915 815 586 313 39 106 chr5 100096255 100096343 -102989189 - L2 LINE L2 -4 3309 3217 1559 202 3 3 chr5 100096343 100096645 -102988887 + AluJo SINE Alu 1 302 0 586 313 39 106 chr5 100096645 100097019 -102988513 - L2 LINE L2 -96 3217 2877 194 281 0 97 chr5 100097100 100097214 -102988318 + MIR SINE MIR 160 262 0 2114 137 0 0 chr5 100097916 100098216 -102987316 + AluSx SINE Alu 1 300 -12 338 318 83 67 chr5 100098342 100098654 -102986878 + L2 LINE L2 2703 3025 -247 2278 98 3 0 chr5 100098654 100098950 -102986582 + AluSp SINE Alu 1 297 -16 338 318 83 67 chr5 100098950 100099130 -102986402 + L2 LINE L2 3025 3201 -71 4180 143 53 6 chr5 100099153 100099854 -102985678 - L1PA16 LINE L1 -9 6157 5424 273 163 61 0 chr5 100099884 100099933 -102985599 - L2 LINE L2 -69 3244 3193 21 0 0 0 chr5 100100088 100100109 -102985423 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr5 100100143 100100176 -102985356 + (TA)n Simple_repeat Simple_repeat 1 33 0 3420 158 34 17 chr5 100100289 100100945 -102984587 - L1MB8 LINE L1 0 6178 5512 1409 191 50 68 chr5 100101072 100101469 -102984063 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 100103274 100103296 -102982236 + AT_rich Low_complexity Low_complexity 1 22 0 2360 99 8 30 chr5 100104602 100104898 -102980634 + THE1A LTR MaLR 1 289 -66 2154 104 24 0 chr5 100104898 100105195 -102980337 - AluSg SINE Alu -6 304 1 2360 99 8 30 chr5 100105195 100105261 -102980271 + THE1A LTR MaLR 289 355 0 27 29 0 0 chr5 100105799 100105833 -102979699 + AT_rich Low_complexity Low_complexity 1 34 0 210 71 0 0 chr5 100105847 100105875 -102979657 + (TATAA)n Simple_repeat Simple_repeat 5 32 0 189 333 0 18 chr5 100109124 100109181 -102976351 - L2 LINE L2 -16 3256 3201 182 358 58 0 chr5 100109449 100109569 -102975963 + L2 LINE L2 2919 3045 -227 430 282 36 28 chr5 100110325 100110509 -102975023 + MIR SINE MIR 7 194 -63 766 104 0 9 chr5 100110588 100110694 -102974838 - AluJb SINE Alu -120 192 88 2067 108 0 30 chr5 100110904 100111200 -102974332 + AluSx SINE Alu 1 287 -25 433 208 0 21 chr5 100111438 100111534 -102973998 - LTR67 LTR ERVL -5 552 459 2477 60 0 3 chr5 100111534 100111832 -102973700 - AluY SINE Alu -14 297 1 691 252 37 47 chr5 100112864 100113078 -102972454 + MIR SINE MIR 46 257 -5 2145 118 0 0 chr5 100113788 100114076 -102971456 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr5 100114076 100114106 -102971426 + AT_rich Low_complexity Low_complexity 1 30 0 629 295 74 22 chr5 100114246 100114517 -102971015 + MLT1L LTR MaLR 19 303 -312 342 235 314 0 chr5 100114521 100114674 -102970858 + L1MC5 LINE L1 7031 7231 -730 931 243 165 23 chr5 100114825 100115352 -102970180 + L1MC5 LINE L1 7264 7865 -96 523 264 132 19 chr5 100115549 100115761 -102969771 + MLT1L LTR MaLR 378 613 -2 26 0 0 0 chr5 100115792 100115818 -102969714 + AT_rich Low_complexity Low_complexity 1 26 0 32 43 0 0 chr5 100117223 100117269 -102968263 + AT_rich Low_complexity Low_complexity 1 46 0 231 265 102 35 chr5 100117291 100117633 -102967899 + L1ME4a LINE L1 5631 5994 -127 180 0 0 0 chr5 100119234 100119254 -102966278 + (A)n Simple_repeat Simple_repeat 1 20 0 840 322 214 33 chr5 100119371 100120383 -102965149 - L3 LINE CR1 -72 1505 310 1956 145 0 3 chr5 100121185 100121475 -102964057 + AluJb SINE Alu 1 289 -23 53 30 0 0 chr5 100121517 100121584 -102963948 + AT_rich Low_complexity Low_complexity 1 67 0 275 276 23 23 chr5 100122657 100122744 -102962788 + MER5B DNA MER1_type 88 174 -4 860 270 57 20 chr5 100123654 100123954 -102961578 - L1MC/D LINE L1 -2181 5627 5317 365 232 33 13 chr5 100124040 100124191 -102961341 + (TA)n Simple_repeat Simple_repeat 1 154 0 239 0 32 0 chr5 100124194 100124225 -102961307 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 2573 203 24 23 chr5 100124238 100124767 -102960765 - MLT2B3 LTR ERVL -36 514 1 904 203 0 0 chr5 100124768 100124926 -102960606 + FRAM SINE Alu 1 158 -18 2332 61 40 0 chr5 100124928 100125224 -102960308 + AluY SINE Alu 1 308 -3 236 194 0 60 chr5 100125235 100125302 -102960230 + L1M4 LINE L1 4558 4620 -1526 354 279 77 101 chr5 100125445 100126209 -102959323 - L1MC/D LINE L1 -1728 4418 3670 2138 93 13 7 chr5 100126209 100126509 -102959023 + AluSq SINE Alu 1 302 -11 354 279 77 101 chr5 100126509 100126551 -102958981 - L1MC/D LINE L1 -2476 3670 3629 2072 98 13 33 chr5 100126880 100127187 -102958345 - AluSq SINE Alu -10 303 3 321 282 50 74 chr5 100127199 100127401 -102958131 - HAL1b LINE L1 -498 850 654 374 299 77 31 chr5 100127424 100127685 -102957847 - HAL1b LINE L1 -776 572 300 423 0 0 0 chr5 100128100 100128147 -102957385 + (TA)n Simple_repeat Simple_repeat 2 48 0 1004 234 22 112 chr5 100128370 100128771 -102956761 - MLT1A1 LTR MaLR 0 365 1 3361 218 52 27 chr5 100128834 100129610 -102955922 - MER21B LTR ERV1 -57 806 12 1089 248 13 0 chr5 100130403 100130637 -102954895 - MIR SINE MIR -20 242 6 34 24 0 0 chr5 100130981 100131022 -102954510 + AT_rich Low_complexity Low_complexity 1 41 0 2293 94 3 0 chr5 100131141 100131440 -102954092 - AluSg SINE Alu -10 300 1 16743 215 26 29 chr5 100131549 100132983 -102952549 - L1PA15 LINE L1 0 7603 6167 236 53 26 0 chr5 100132983 100133021 -102952511 + (TTG)n Simple_repeat Simple_repeat 1 39 0 16743 215 26 29 chr5 100133021 100138609 -102946923 - L1PA15 LINE L1 -1436 6167 598 9110 229 54 43 chr5 100138675 100142147 -102943385 - L1 LINE L1 -1681 5167 1620 1581 138 0 0 chr5 100142147 100142365 -102943167 - AluSx SINE Alu -90 222 5 9110 229 54 43 chr5 100142365 100143920 -102941612 - L1 LINE L1 -5228 1620 84 1212 184 109 67 chr5 100143922 100144253 -102941279 + MLT2B1 LTR ERVL 102 446 -74 296 248 0 18 chr5 100144253 100144366 -102941166 + (TATATG)n Simple_repeat Simple_repeat 3 113 0 227 130 22 22 chr5 100144366 100144412 -102941120 + MLT2B1 LTR ERVL 464 509 -11 360 340 47 24 chr5 100144414 100144639 -102940893 - MIR3 SINE MIR -30 232 2 22 56 0 0 chr5 100145100 100145136 -102940396 + AT_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr5 100145329 100145349 -102940183 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 425 241 35 114 chr5 100145351 100145579 -102939953 - L2 LINE L2 -9 3304 3095 316 214 270 0 chr5 100145598 100145687 -102939845 - MER81 DNA DNA -1 113 1 369 252 118 30 chr5 100145741 100145876 -102939656 - L2 LINE L2 -342 2971 2825 2362 106 0 0 chr5 100147394 100147705 -102937827 - AluSx SINE Alu -1 311 1 192 184 0 0 chr5 100147839 100147888 -102937644 + T-rich Low_complexity Low_complexity 1 49 0 237 33 0 0 chr5 100147920 100147950 -102937582 + (CA)n Simple_repeat Simple_repeat 2 31 0 276 299 78 42 chr5 100147993 100148160 -102937372 + MIR SINE MIR 90 262 0 1816 159 10 33 chr5 100149385 100149775 -102935757 + L1MA7 LINE L1 5911 6291 0 399 280 98 33 chr5 100149848 100150062 -102935470 + MLT1L LTR MaLR 382 609 -6 623 319 23 80 chr5 100150313 100150664 -102934868 + L2 LINE L2 2937 3267 -5 21 0 0 0 chr5 100151454 100151475 -102934057 + AT_rich Low_complexity Low_complexity 1 21 0 207 182 45 0 chr5 100152194 100152238 -102933294 + (ATTG)n Simple_repeat Simple_repeat 3 48 0 979 88 0 0 chr5 100152588 100152713 -102932819 + AluY SINE Alu 171 295 -16 218 370 120 28 chr5 100154588 100154912 -102930620 - L2 LINE L2 -8 3264 2911 1811 212 73 24 chr5 100154942 100155409 -102930123 + LTR2B LTR ERV1 1 490 0 369 216 103 41 chr5 100155427 100155524 -102930008 + L2 LINE L2 3208 3310 -3 366 362 38 62 chr5 100155520 100155710 -102929822 - L2 LINE L2 -429 2885 2692 * 568 217 23 34 chr5 100155710 100155885 -102929647 - MER104 DNA MER2_type -3 177 5 366 362 38 62 chr5 100155885 100156117 -102929415 - L2 LINE L2 -622 2692 2473 374 274 9 9 chr5 100156142 100156255 -102929277 - L2 LINE L2 -1017 2297 2185 408 327 96 56 chr5 100156294 100156688 -102928844 - L2 LINE L2 -619 2695 2286 523 360 40 16 chr5 100156803 100157053 -102928479 + MIR SINE MIR 7 262 0 183 240 20 0 chr5 100157123 100157173 -102928359 - L2 LINE L2 -1 3312 3262 1804 111 19 4 chr5 100158147 100158417 -102927115 - L1PA8 LINE L1 -6 6166 5893 26 0 0 0 chr5 100158423 100158449 -102927083 + AT_rich Low_complexity Low_complexity 1 26 0 789 182 0 8 chr5 100159136 100159268 -102926264 + FLAM_A SINE Alu 1 131 -2 571 262 105 71 chr5 100160082 100160406 -102925126 + HAL1 LINE L1 2 336 -2171 779 306 20 30 chr5 100160421 100160722 -102924810 + HAL1 LINE L1 418 715 -1792 487 310 14 78 chr5 100160696 100161044 -102924488 + HAL1 LINE L1 1153 1478 -1029 * 300 271 91 42 chr5 100161279 100161734 -102923798 + L1ME LINE L1 530 1295 -4706 1151 261 162 27 chr5 100161747 100162420 -102923112 + HAL1 LINE L1 1739 2502 -5 2125 151 37 38 chr5 100162704 100163254 -102922278 + MLT2A2 LTR ERVL 1 546 -8 1865 185 0 0 chr5 100163528 100163820 -102921712 + AluJb SINE Alu 1 292 -20 266 191 73 29 chr5 100164172 100164240 -102921292 - MIR3 SINE MIR -13 195 125 2143 193 16 0 chr5 100164245 100164623 -102920909 - LTR39 LTR ERV1 0 783 400 1840 203 54 31 chr5 100164672 100165143 -102920389 - LTR39 LTR ERV1 -390 393 1 2275 243 52 7 chr5 100166638 100167239 -102918293 + L1MEc LINE L1 208 835 -5561 678 251 109 33 chr5 100167272 100167602 -102917930 + L1MEc LINE L1 978 1332 -5064 1316 160 63 87 chr5 100169419 100169719 -102915813 - AluJo SINE Alu -9 293 1 242 259 0 17 chr5 100169848 100169906 -102915626 + MER113 DNA MER1_type? 460 516 -5 1268 224 34 68 chr5 100171595 100172068 -102913464 - MER110A LTR ERV1 0 468 44 983 237 62 51 chr5 100173170 100173444 -102912088 + L1MC/D LINE L1 5460 5736 -2072 * 3073 173 13 3 chr5 100173422 100174052 -102911480 + L1PA16 LINE L1 4728 5363 -783 5782 111 24 9 chr5 100174057 100175081 -102910451 + L1PB2 LINE L1 5100 6137 -14 3413 111 4 26 chr5 100175098 100175227 -102910305 + L1PA16 LINE L1 5355 5485 -681 1740 189 0 3 chr5 100175227 100175540 -102909992 + AluJo SINE Alu 1 312 0 3413 111 4 26 chr5 100175540 100175941 -102909591 + L1PA16 LINE L1 5485 5873 -293 1525 118 34 25 chr5 100175941 100176178 -102909354 - THE1C LTR MaLR -136 239 1 701 237 14 3 chr5 100176178 100176401 -102909131 + L1MC4a LINE L1 7568 7967 -28 22 0 0 0 chr5 100176432 100176454 -102909078 + AT_rich Low_complexity Low_complexity 1 22 0 192 125 0 0 chr5 100176754 100176786 -102908746 + (TTA)n Simple_repeat Simple_repeat 3 34 0 180 228 51 76 chr5 100176810 100176889 -102908643 - MIR SINE MIR -87 175 99 2375 50 12 47 chr5 100177360 100177681 -102907851 - AluY SINE Alu -1 310 1 25 0 0 0 chr5 100177843 100177868 -102907664 + AT_rich Low_complexity Low_complexity 1 25 0 589 299 53 11 chr5 100179143 100179330 -102906202 - MIR SINE MIR -63 199 5 181 264 56 69 chr5 100179511 100179583 -102905949 + L2 LINE L2 3190 3260 -12 226 321 113 54 chr5 100179797 100179965 -102905567 - MER5A DNA MER1_type -10 179 2 2713 279 65 10 chr5 100180208 100181006 -102904526 - L2 LINE L2 -1821 1493 652 261 258 90 0 chr5 100181077 100181166 -102904366 + MER77 LTR ERV1 101 197 -408 * 741 261 47 150 chr5 100181139 100181587 -102903945 + MER77 LTR ERV1 98 526 -79 2101 162 37 11 chr5 100181642 100181994 -102903538 - THE1B LTR MaLR 0 364 4 11367 106 5 0 chr5 100181997 100183568 -102901964 - THE1B-int LTR MaLR 0 1580 2 2111 154 36 14 chr5 100183569 100183925 -102901607 - THE1B LTR MaLR 0 364 1 519 309 85 30 chr5 100184741 100185104 -102900428 - MLT1I LTR MaLR -19 390 8 16186 153 21 5 chr5 100185543 100185626 -102899906 - Tigger2 DNA MER2_type 0 2718 2638 2131 150 82 15 chr5 100185626 100186027 -102899505 - MSTA LTR MaLR 0 428 1 16186 153 21 5 chr5 100186027 100188617 -102896915 - Tigger2 DNA MER2_type -80 2638 1 2143 114 0 7 chr5 100188685 100188983 -102896549 + AluSq SINE Alu 1 296 -17 300 286 105 83 chr5 100189017 100189112 -102896420 - L1ME LINE L1 -406 5715 5615 1731 173 7 36 chr5 100189112 100189418 -102896114 - AluSx SINE Alu -15 297 1 300 286 105 83 chr5 100189418 100189455 -102896077 - L1ME LINE L1 -506 5615 5580 266 366 45 0 chr5 100189460 100189572 -102895960 + L2 LINE L2 3197 3313 0 28 48 0 0 chr5 100190902 100190944 -102894588 + AT_rich Low_complexity Low_complexity 1 42 0 862 245 35 38 chr5 100191894 100192155 -102893377 + MLT1L LTR MaLR 19 278 -337 3631 88 43 22 chr5 100192161 100192332 -102893200 - MER41A LTR ERV1 -8 546 380 1940 137 0 0 chr5 100192332 100192610 -102892922 - AluSx SINE Alu -13 299 22 3631 88 43 22 chr5 100192610 100192973 -102892559 - MER41A LTR ERV1 -174 380 1 812 231 96 40 chr5 100192988 100193291 -102892241 + MLT1L LTR MaLR 290 609 -6 330 287 37 112 chr5 100193727 100193764 -102891768 - HAL1 LINE L1 0 2507 2469 1657 191 23 0 chr5 100193764 100194063 -102891469 + AluJb SINE Alu 1 306 -6 330 287 37 112 chr5 100194063 100194213 -102891319 - HAL1 LINE L1 -38 2469 2334 1295 150 10 107 chr5 100194227 100194527 -102891005 - MLT1B LTR MaLR 0 390 120 2102 133 0 0 chr5 100194651 100194944 -102890588 + AluSx SINE Alu 1 293 -19 1918 258 142 45 chr5 100194953 100195722 -102889810 - HAL1 LINE L1 -1635 872 30 1286 234 155 24 chr5 100195871 100196496 -102889036 - L1MC4a LINE L1 -1773 6035 5329 202 194 0 0 chr5 100196536 100196572 -102888960 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 281 0 0 chr5 100196927 100196984 -102888548 + MIR SINE MIR 98 154 -108 22 88 0 0 chr5 100197583 100197640 -102887892 + AT_rich Low_complexity Low_complexity 1 57 0 281 289 186 13 chr5 100201993 100202149 -102883383 + MIR SINE MIR 6 188 -74 416 205 25 115 chr5 100202202 100202324 -102883208 - MER94 DNA DNA -18 116 6 913 239 212 15 chr5 100202326 100202781 -102882751 + LTR50 LTR ERVL 1 632 -163 2278 115 0 0 chr5 100203356 100203668 -102881864 + AluSx SINE Alu 1 312 0 1635 186 183 3 chr5 100203924 100204285 -102881247 + MSTB LTR MaLR 1 426 0 26 30 0 0 chr5 100205195 100205228 -102880304 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr5 100206039 100206083 -102879449 + AT_rich Low_complexity Low_complexity 1 44 0 202 180 80 20 chr5 100206506 100206556 -102878976 + MIR SINE MIR 19 71 -137 267 177 35 80 chr5 100206786 100206899 -102878633 + L1MC5 LINE L1 7628 7735 -226 198 0 0 0 chr5 100206931 100206953 -102878579 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 954 142 0 0 chr5 100206972 100207113 -102878419 - AluJb SINE Alu -171 141 1 421 254 101 0 chr5 100207130 100207268 -102878264 + L1MC4 LINE L1 7864 8015 -27 1243 201 138 7 chr5 100208318 100208622 -102876910 - MER2 DNA MER2_type 0 344 1 1200 179 4 1 chr5 100208728 100210228 -102875304 + ALR/Alpha Satellite centromeric 1 1504 -14 932 186 12 3 chr5 100210239 100210492 -102875040 + ALR/Alpha Satellite centromeric 1 255 -1 4159 11 0 0 chr5 100260492 100260985 -102824547 - L1P1 LINE L1 -429 5726 5234 * 6417 25 0 0 chr5 100260984 100261747 -102823785 + L1P1 LINE L1 4480 5242 -904 197 119 24 0 chr5 100261829 100261871 -102823661 + GA-rich Low_complexity Low_complexity 1 43 0 1245 163 4 54 chr5 100262116 100262355 -102823177 - AluSx SINE Alu -85 227 1 557 131 0 0 chr5 100262355 100262439 -102823093 + L1 LINE L1 3536 3619 -2527 3785 169 67 1 chr5 100262453 100263241 -102822291 + L1 LINE L1 4122 4961 -1185 1622 126 21 105 chr5 100263244 100263577 -102821955 - AluYb8 SINE Alu -13 305 1 1960 255 123 56 chr5 100263584 100263999 -102821533 - HAL1 LINE L1 -475 2032 1646 2395 76 0 16 chr5 100263999 100264302 -102821230 - AluY SINE Alu -13 298 1 1960 255 123 56 chr5 100264302 100264909 -102820623 - HAL1 LINE L1 -861 1646 941 693 162 70 84 chr5 100264909 100265193 -102820339 - L1MC5 LINE L1 -49 7912 7633 287 174 92 31 chr5 100265529 100265627 -102819905 - L1MC5 LINE L1 -50 7911 7808 1352 173 93 25 chr5 100265637 100265915 -102819617 - AluJo SINE Alu -10 302 6 231 256 54 60 chr5 100265931 100266099 -102819433 - L1MC5 LINE L1 -185 7776 7610 203 256 0 0 chr5 100266105 100266148 -102819384 + CT-rich Low_complexity Low_complexity 3 45 0 682 236 16 62 chr5 100266161 100266419 -102819113 - L1MC5 LINE L1 -385 7576 7331 483 317 42 31 chr5 100266422 100266681 -102818851 - L1M4 LINE L1 -881 5265 5004 2282 97 0 0 chr5 100266961 100267259 -102818273 - AluSp SINE Alu -15 298 1 1869 92 0 4 chr5 100267261 100267511 -102818021 - AluSx SINE Alu -8 304 56 1255 272 29 29 chr5 100267614 100267993 -102817539 - LTR40b LTR ERVL -1 461 83 693 197 0 29 chr5 100267996 100268133 -102817399 - FLAM_A SINE Alu 0 133 1 1917 112 3 46 chr5 100268161 100268465 -102817067 + AluSx SINE Alu 1 291 -21 1304 174 35 19 chr5 100268513 100268771 -102816761 - AluJb SINE Alu -50 262 1 1985 223 46 14 chr5 100268778 100269381 -102816151 + L1MB7 LINE L1 4850 5467 -717 883 217 52 46 chr5 100269389 100269651 -102815881 - MSTD LTR MaLR -13 383 85 2117 96 16 45 chr5 100269651 100269963 -102815569 - AluSq SINE Alu -8 305 3 883 217 52 46 chr5 100269963 100270029 -102815503 - MSTD LTR MaLR -311 85 21 3328 179 48 6 chr5 100270033 100270739 -102814793 + L1MB7 LINE L1 5449 6184 0 434 173 27 13 chr5 100270751 100270826 -102814706 - LTR40a LTR ERVL -443 76 1 29 60 0 0 chr5 100270923 100270973 -102814559 + AT_rich Low_complexity Low_complexity 1 50 0 2323 86 0 0 chr5 100270974 100271265 -102814267 + AluSc SINE Alu 1 291 -18 448 320 51 64 chr5 100271495 100271700 -102813832 - HAL1 LINE L1 -1737 770 569 2172 128 0 0 chr5 100271700 100271998 -102813534 - AluSx SINE Alu -14 298 1 448 320 51 64 chr5 100271998 100272104 -102813428 - HAL1 LINE L1 -1938 569 463 325 186 71 0 chr5 100272127 100272197 -102813335 - MER69 DNA AcHobo -2 2524 2450 * 345 237 6 109 chr5 100272194 100272246 -102813286 - MER69 DNA AcHobo -2379 147 91 1933 159 3 0 chr5 100272246 100272542 -102812990 + AluJb SINE Alu 3 299 -13 345 237 6 109 chr5 100272542 100272645 -102812887 - MER69 DNA AcHobo -2435 91 8 1075 294 13 10 chr5 100272764 100273077 -102812455 - HAL1 LINE L1 -2184 323 10 501 253 91 75 chr5 100273118 100273345 -102812187 - L1ME LINE L1 -593 5571 5349 2121 122 0 3 chr5 100273345 100273640 -102811892 - AluSg SINE Alu -16 294 1 501 253 91 75 chr5 100273640 100273668 -102811864 - L1ME LINE L1 -815 5349 5323 951 234 87 102 chr5 100273668 100274218 -102811314 + MER34 LTR ERV1 1 542 0 501 253 91 75 chr5 100274218 100274269 -102811263 - L1ME LINE L1 -841 5323 5259 414 251 146 28 chr5 100274334 100274621 -102810911 - L1ME LINE L1 -1022 5124 4804 180 214 0 0 chr5 100275538 100275594 -102809938 + (TG)n Simple_repeat Simple_repeat 1 56 0 23 54 0 0 chr5 100276130 100276167 -102809365 + AT_rich Low_complexity Low_complexity 1 37 0 483 262 18 6 chr5 100277602 100277766 -102807766 + MER103 DNA DNA 1 166 0 733 201 147 0 chr5 100277848 100278032 -102807500 + LTR40b LTR ERVL 252 462 0 365 326 11 32 chr5 100278032 100278222 -102807310 + L1MEc LINE L1 1949 2134 -4262 4670 231 62 73 chr5 100278238 100278913 -102806619 + L1MEc LINE L1 2242 2923 -3292 1873 153 0 23 chr5 100278913 100279220 -102806312 - AluSx SINE Alu -12 300 1 4670 231 62 73 chr5 100279220 100280121 -102805411 + L1MEc LINE L1 2923 3788 -2427 1519 175 16 45 chr5 100280121 100280429 -102805103 + AluJo SINE Alu 1 299 -13 4670 231 62 73 chr5 100280429 100281270 -102804262 + L1MEc LINE L1 3788 4637 -1578 692 218 88 47 chr5 100281285 100281421 -102804111 + MER3 DNA MER1_type 4 152 -57 1265 192 78 19 chr5 100281421 100281692 -102803840 - AluJo SINE Alu -13 289 3 692 218 88 47 chr5 100281692 100281748 -102803784 + MER3 DNA MER1_type 152 204 -5 1950 219 77 59 chr5 100281751 100281918 -102803614 + L1MEc LINE L1 4648 4811 -1420 280 86 0 0 chr5 100281918 100281953 -102803579 + U2 snRNA snRNA 1 35 -153 1950 219 77 59 chr5 100281953 100282685 -102802847 + L1MEc LINE L1 4811 5581 -650 * 6549 125 50 3 chr5 100282669 100282685 -102802847 - L1PBa LINE L1 -3449 3413 3399 1925 142 27 0 chr5 100282685 100282981 -102802551 + AluSx SINE Alu 1 304 -8 6549 125 50 3 chr5 100282981 100284453 -102801079 - L1 LINE L1 -3463 3399 1853 2040 212 0 7 chr5 100284452 100284904 -102800628 + L1 LINE L1 3398 3846 -3016 * 1453 108 0 0 chr5 100284910 100285095 -102800437 - AluSx SINE Alu -127 185 1 1355 324 182 46 chr5 100285103 100285502 -102800030 - HAL1 LINE L1 -1229 1278 935 4924 106 62 4 chr5 100285502 100286298 -102799234 + L1MA4 LINE L1 5457 6298 -2 1355 324 182 46 chr5 100286298 100286565 -102798967 - HAL1 LINE L1 -1572 935 706 261 0 0 0 chr5 100286565 100286594 -102798938 + (CA)n Simple_repeat Simple_repeat 1 29 0 1355 324 182 46 chr5 100286594 100287040 -102798492 - HAL1 LINE L1 -1801 706 13 295 291 32 15 chr5 100287823 100287937 -102797595 + MIR SINE MIR 28 141 -67 234 0 0 0 chr5 100291295 100291321 -102794211 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2181 96 20 0 chr5 100291518 100291819 -102793713 - AluSq SINE Alu -6 307 1 738 265 143 52 chr5 100292516 100292859 -102792673 + L2 LINE L2 2932 3305 -8 208 299 88 54 chr5 100292926 100293073 -102792459 - L2 LINE L2 -166 3106 2955 2649 77 36 3 chr5 100293501 100293866 -102791666 - MER51B LTR ERV1 0 377 1 221 250 21 0 chr5 100293917 100293965 -102791567 - MIR3 SINE MIR -3 205 157 249 326 22 0 chr5 100294271 100294363 -102791169 + MIR SINE MIR 58 151 -57 1156 89 76 0 chr5 100294375 100294532 -102791000 - AluSg/x SINE Alu -10 300 132 914 56 0 0 chr5 100294532 100294639 -102790893 + AluSc SINE Alu 21 127 -182 736 253 0 0 chr5 100294639 100294801 -102790731 - MER5B DNA MER1_type -2 176 15 2240 105 0 3 chr5 100294998 100295311 -102790221 + AluSx SINE Alu 1 312 0 243 156 266 0 chr5 100295860 100295924 -102789608 + L2 LINE L2 3231 3311 -2 210 268 21 82 chr5 100296421 100296518 -102789014 - MER5B DNA MER1_type -63 115 25 596 249 26 17 chr5 100296815 100297004 -102788528 + L1MC5 LINE L1 7061 7250 -728 481 188 75 30 chr5 100297143 100297276 -102788256 + L1MC5 LINE L1 7299 7437 -524 427 288 196 7 chr5 100297285 100297438 -102788094 + MER5A DNA MER1_type 8 189 0 345 234 140 22 chr5 100297456 100297813 -102787719 + L1MC5 LINE L1 7452 7880 -81 624 175 26 0 chr5 100298017 100298131 -102787401 + LTR8A LTR ERV1 1 117 -610 4550 107 14 31 chr5 100298132 100298667 -102786865 + LTR8 LTR ERV1 1 523 -168 2338 82 3 10 chr5 100298667 100298973 -102786559 + AluSp SINE Alu 1 304 -9 4550 107 14 31 chr5 100298973 100299140 -102786392 + LTR8 LTR ERV1 523 691 0 1612 104 36 0 chr5 100299331 100299551 -102785981 + AluSx SINE Alu 1 228 -84 37 0 0 0 chr5 100299551 100299588 -102785944 + AT_rich Low_complexity Low_complexity 1 37 0 488 243 99 7 chr5 100299851 100299949 -102785583 - MER5B DNA MER1_type -7 171 53 632 195 98 11 chr5 100299949 100300123 -102785409 - MER5A DNA MER1_type 0 189 1 488 243 99 7 chr5 100300123 100300176 -102785356 - MER5B DNA MER1_type -125 53 6 213 231 115 77 chr5 100300828 100300932 -102784600 + MIR3 SINE MIR 91 198 -10 882 265 141 32 chr5 100302242 100302741 -102782791 + L2 LINE L2 2762 3313 0 22 0 0 0 chr5 100303069 100303091 -102782441 + AT_rich Low_complexity Low_complexity 1 22 0 2559 68 0 0 chr5 100303187 100303498 -102782034 - AluY SINE Alu 0 311 1 21 95 0 0 chr5 100304088 100304151 -102781381 + AT_rich Low_complexity Low_complexity 1 63 0 594 268 61 9 chr5 100304301 100304529 -102781003 - L1ME4a LINE L1 -225 5896 5657 2044 120 10 32 chr5 100305066 100305374 -102780158 - AluSx SINE Alu -11 301 1 2139 138 0 0 chr5 100305633 100305924 -102779608 + AluSx SINE Alu 3 293 -19 1867 138 3 46 chr5 100306189 100306515 -102779017 - AluJo SINE Alu 0 312 1 288 224 26 0 chr5 100306582 100306658 -102778874 + (TA)n Simple_repeat Simple_repeat 2 79 0 4911 195 47 30 chr5 100307291 100308407 -102777125 + Looper DNA T2_type 3 1145 -413 2063 79 76 0 chr5 100308407 100308684 -102776848 + AluY SINE Alu 1 298 -13 4911 195 47 30 chr5 100308684 100308819 -102776713 + Looper DNA T2_type 1145 1276 -282 1062 242 4 0 chr5 100308801 100309049 -102776483 + Looper DNA T2_type 1175 1423 -135 * 1791 153 13 3 chr5 100309050 100309350 -102776182 - AluJb SINE Alu -9 303 1 3884 155 58 61 chr5 100309362 100309518 -102776014 - L1MB7 LINE L1 -1 6183 6028 1836 145 0 29 chr5 100309518 100309828 -102775704 - AluSg SINE Alu -9 301 1 3884 155 58 61 chr5 100309828 100310550 -102774982 - L1MB7 LINE L1 -156 6028 5308 412 128 60 68 chr5 100310598 100310715 -102774817 + Looper DNA T2_type 1443 1558 0 2200 79 11 0 chr5 100311779 100312081 -102773451 - AluY SINE Alu 0 309 5 352 343 130 0 chr5 100312373 100312519 -102773013 - MIR3 SINE MIR -25 183 19 22 0 0 0 chr5 100312985 100313007 -102772525 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 100313445 100313467 -102772065 + AT_rich Low_complexity Low_complexity 1 22 0 1628 188 0 14 chr5 100313641 100313923 -102771609 + AluJb SINE Alu 1 278 -34 1125 176 47 16 chr5 100314114 100314389 -102771143 - L1PA16 LINE L1 -2 6172 5857 398 258 106 15 chr5 100314593 100314725 -102770807 - L2 LINE L2 -5 3308 3165 997 301 84 53 chr5 100314776 100315468 -102770064 - L2 LINE L2 -884 2430 1718 308 140 0 0 chr5 100315508 100315565 -102769967 - L1MB8 LINE L1 -2 6176 6120 22 0 0 0 chr5 100316328 100316350 -102769182 + AT_rich Low_complexity Low_complexity 1 22 0 30 27 0 0 chr5 100318324 100318361 -102767171 + AT_rich Low_complexity Low_complexity 1 37 0 685 264 132 62 chr5 100318397 100318897 -102766635 - L1MC4a LINE L1 -1748 6060 5526 432 340 37 5 chr5 100318929 100319120 -102766412 - MIR SINE MIR 0 262 66 2363 74 0 10 chr5 100320096 100320393 -102765139 + AluY SINE Alu 1 294 -17 23 0 0 0 chr5 100320428 100320451 -102765081 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 100320562 100320591 -102764941 + AT_rich Low_complexity Low_complexity 1 29 0 1860 152 21 0 chr5 100321772 100322055 -102763477 + AluSx SINE Alu 3 291 -21 289 345 0 0 chr5 100322351 100322493 -102763039 + GA-rich Low_complexity Low_complexity 1 142 0 2007 88 15 0 chr5 100324600 100324861 -102760671 + AluSq SINE Alu 1 265 -48 206 245 133 82 chr5 100324881 100324979 -102760553 - L2 LINE L2 -1 3271 3169 403 349 78 67 chr5 100325175 100325758 -102759774 - L2 LINE L2 -5 3267 2678 248 170 142 113 chr5 100325807 100325913 -102759619 + MER20 DNA MER1_type 1 109 -110 1856 48 13 4 chr5 100325980 100326211 -102759321 + AluY SINE Alu 65 297 -14 792 227 62 88 chr5 100326803 100327226 -102758306 - L1MC5 LINE L1 -51 7910 7499 198 320 100 30 chr5 100329098 100329198 -102756334 + MIR SINE MIR 34 140 -68 524 206 0 0 chr5 100330432 100330524 -102755008 + AluJb SINE Alu 140 231 -81 367 143 0 0 chr5 100330528 100330591 -102754941 + AluJb SINE Alu 177 239 -63 198 0 0 0 chr5 100330592 100330614 -102754918 + (CA)n Simple_repeat Simple_repeat 2 23 0 920 152 19 19 chr5 100330802 100330960 -102754572 + FRAM SINE Alu 6 163 -13 23 33 0 0 chr5 100330969 100330999 -102754533 + AT_rich Low_complexity Low_complexity 1 30 0 207 271 0 0 chr5 100332226 100332274 -102753258 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr5 100332515 100332553 -102752979 + AT_rich Low_complexity Low_complexity 1 38 0 28 71 0 0 chr5 100334312 100334368 -102751164 + AT_rich Low_complexity Low_complexity 1 56 0 358 235 117 31 chr5 100335743 100335905 -102749627 - MER104 DNA Tc2 0 180 5 689 313 71 58 chr5 100336214 100336480 -102749052 - L2 LINE L2 -828 2486 2225 2244 102 3 0 chr5 100336480 100336774 -102748758 + AluSx SINE Alu 1 295 -17 689 313 71 58 chr5 100336774 100336928 -102748604 - L2 LINE L2 -1089 2225 2055 758 234 96 8 chr5 100336928 100337167 -102748365 + MIR SINE MIR 3 262 0 689 313 71 58 chr5 100337167 100337292 -102748240 - L2 LINE L2 -1259 2055 1933 27 29 0 0 chr5 100337764 100337798 -102747734 + AT_rich Low_complexity Low_complexity 1 34 0 2024 130 128 8 chr5 100337877 100338245 -102747287 + MSTA LTR MaLR 17 428 0 277 250 45 18 chr5 100338913 100339025 -102746507 + Charlie2a DNA MER1_type 1405 1519 -1343 1217 205 75 75 chr5 100339053 100339708 -102745824 + Charlie2a DNA MER1_type 2203 2857 -5 378 280 73 87 chr5 100339815 100340251 -102745281 + L1ME4a LINE L1 5584 6013 -108 2447 56 3 3 chr5 100340430 100340734 -102744798 - AluY SINE Alu -7 304 1 2239 103 0 0 chr5 100341286 100341592 -102743940 - AluSx SINE Alu 0 306 1 34 55 0 0 chr5 100341750 100341805 -102743727 + AT_rich Low_complexity Low_complexity 1 55 0 715 302 139 12 chr5 100342501 100342931 -102742601 - L2 LINE L2 -834 2480 1996 591 182 35 7 chr5 100343053 100343191 -102742341 + Tigger4(Zombi) DNA MER2_type 2 146 -2585 * 2638 113 90 9 chr5 100343189 100343624 -102741908 + Tigger4(Zombi) DNA MER2_type 2262 2731 0 272 89 90 7 chr5 100346283 100346343 -102739189 + MADE1 DNA Mariner 46 80 0 438 254 154 38 chr5 100347352 100347592 -102737940 + L1MC/D LINE L1 5538 5805 -2003 182 269 39 0 chr5 100347661 100347713 -102737819 - L2 LINE L2 -60 3253 3200 180 152 0 0 chr5 100347851 100347884 -102737648 + (CA)n Simple_repeat Simple_repeat 2 34 0 640 259 47 51 chr5 100349463 100349699 -102735833 - L2 LINE L2 0 3313 3079 1040 232 143 9 chr5 100349724 100350039 -102735493 - L2 LINE L2 -380 2934 2578 525 238 66 0 chr5 100351372 100351494 -102734038 + Charlie1a DNA MER1_type 6 135 -1320 629 245 171 53 chr5 100351515 100351709 -102733823 - L2 LINE L2 -466 2848 2618 2363 74 0 32 chr5 100351709 100352020 -102733512 + AluY SINE Alu 4 304 -7 629 245 171 53 chr5 100352020 100352070 -102733462 - L2 LINE L2 -696 2618 2575 2501 183 14 81 chr5 100352082 100352148 -102733384 + Charlie1a DNA MER1_type 266 335 -2426 2118 134 0 0 chr5 100352148 100352446 -102733086 + AluSx SINE Alu 1 298 -14 2501 183 14 81 chr5 100352446 100352655 -102732877 + Charlie1a DNA MER1_type 335 556 -2205 1633 170 21 28 chr5 100352655 100352944 -102732588 + AluJb SINE Alu 1 287 -25 2501 183 14 81 chr5 100352944 100353383 -102732149 + Charlie1a DNA MER1_type 556 933 -522 1081 204 87 117 chr5 100353385 100353855 -102731677 - MER4C LTR ERV1 -4 461 6 1185 163 29 0 chr5 100353859 100354068 -102731464 + Charlie1a DNA MER1_type 928 1142 -313 4957 180 26 26 chr5 100354077 100354580 -102730952 + L1MB5 LINE L1 4263 4764 -1410 1938 173 66 36 chr5 100354580 100355019 -102730513 - LTR47A LTR ERVL 0 452 1 4957 180 26 26 chr5 100355019 100355553 -102729979 + L1MB5 LINE L1 4764 5296 -878 2175 123 3 0 chr5 100355553 100355863 -102729669 + AluY SINE Alu 1 311 0 4957 180 26 26 chr5 100355863 100356718 -102728814 + L1MB5 LINE L1 5296 6174 0 704 123 99 0 chr5 100356718 100356880 -102728652 + Charlie1a DNA MER1_type 1138 1315 -140 2077 133 50 14 chr5 100357222 100357582 -102727950 + THE1C LTR MaLR 1 373 -2 748 251 10 5 chr5 100357916 100358115 -102727417 - L1MC4 LINE L1 -151 7891 7692 2372 84 0 0 chr5 100358119 100358418 -102727114 - AluY SINE Alu -12 299 1 4229 129 50 57 chr5 100358452 100359361 -102726171 - MER4D LTR ERV1 0 866 1 1091 219 3 74 chr5 100359379 100359690 -102725842 - L1MC4 LINE L1 -369 7673 7385 323 302 163 45 chr5 100359693 100359895 -102725637 - MIR SINE MIR -36 226 1 24 32 0 0 chr5 100361844 100361875 -102723657 + AT_rich Low_complexity Low_complexity 1 31 0 306 134 0 175 chr5 100361956 100362053 -102723479 + MER116 DNA Mariner 1 80 0 308 313 153 0 chr5 100365073 100365217 -102720315 - MIR SINE MIR -12 250 85 1171 21 0 0 chr5 100365503 100365644 -102719888 + L1PA4 LINE L1 6014 6154 -1 1469 206 0 24 chr5 100366339 100366488 -102719044 - AluJb SINE Alu -30 282 142 2454 64 0 0 chr5 100366488 100366784 -102718748 - AluY SINE Alu -15 296 1 1469 206 0 24 chr5 100366784 100366921 -102718611 - AluJb SINE Alu -170 142 3 34 0 0 0 chr5 100367344 100367378 -102718154 + AT_rich Low_complexity Low_complexity 1 34 0 1950 155 0 0 chr5 100367459 100367749 -102717783 - AluSx SINE Alu -18 294 5 267 54 0 0 chr5 100367981 100368018 -102717514 + (GA)n Simple_repeat Simple_repeat 2 38 0 255 319 160 0 chr5 100369322 100369416 -102716116 + L2 LINE L2 3160 3268 -4 693 252 71 38 chr5 100369489 100369699 -102715833 + MER58A DNA MER1_type 2 218 -6 186 294 95 48 chr5 100369979 100370105 -102715427 + L2 LINE L2 3171 3302 -11 2564 142 31 9 chr5 100370584 100371007 -102714525 + MSTB1 LTR MaLR 1 432 0 431 149 23 0 chr5 100371963 100372050 -102713482 + CT-rich Low_complexity Low_complexity 2 90 0 976 322 63 34 chr5 100372050 100372559 -102712973 - L2 LINE L2 -19 3294 2772 392 216 97 60 chr5 100373899 100374033 -102711499 - MIR SINE MIR -4 258 120 215 238 0 32 chr5 100374592 100374655 -102710877 + GA-rich Low_complexity Low_complexity 1 61 0 27 73 0 0 chr5 100375335 100375390 -102710142 + AT_rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr5 100375940 100375965 -102709567 + AT_rich Low_complexity Low_complexity 1 25 0 458 308 33 0 chr5 100375981 100376101 -102709431 + MIR3 SINE MIR 60 183 -25 434 302 149 5 chr5 100376241 100376456 -102709076 - MIR SINE MIR -15 247 2 260 287 103 59 chr5 100376926 100377062 -102708470 - MIR SINE MIR -11 251 110 340 336 0 17 chr5 100377157 100377273 -102708259 - MIR3 SINE MIR -12 196 83 190 398 10 31 chr5 100377426 100377524 -102708008 + L2 LINE L2 3181 3276 -37 7729 215 53 27 chr5 100380443 100380528 -102705004 - L1MB7 LINE L1 -19 6663 6582 2154 110 0 7 chr5 100380528 100380820 -102704712 + AluSq SINE Alu 3 292 -21 7729 215 53 27 chr5 100380820 100383298 -102702234 - L1MB7 LINE L1 -100 6582 4170 2134 101 13 20 chr5 100383298 100383604 -102701928 - AluSx SINE Alu -6 306 3 7729 215 53 27 chr5 100383604 100384493 -102701039 - L1MB7 LINE L1 -2512 4170 3305 1475 249 44 26 chr5 100384493 100384882 -102700650 - MSTD LTR MaLR 0 396 1 7729 215 53 27 chr5 100384882 100384926 -102700606 - L1MB7 LINE L1 -3377 3305 3264 180 0 0 0 chr5 100384926 100384946 -102700586 + (TA)n Simple_repeat Simple_repeat 2 21 0 7729 215 53 27 chr5 100384946 100387586 -102697946 - L1MB7 LINE L1 -3418 3264 9 279 54 0 0 chr5 100387909 100387946 -102697586 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 661 210 1 20 chr5 100388011 100388179 -102697353 + L1P LINE L1 4775 4941 -1205 2093 165 6 0 chr5 100388856 100389202 -102696330 - MER7A DNA MER2_type 0 346 1 3305 187 18 12 chr5 100389415 100390137 -102695395 - L1 LINE L1 -1205 4941 4216 2136 253 11 5 chr5 100390133 100390762 -102694770 - L1 LINE L1 -2486 3660 3028 * 1500 116 5 0 chr5 100390781 100391019 -102694513 - AluSg/x SINE Alu 0 324 86 32646 72 14 37 chr5 100391676 100397343 -102688189 - L1PA6 LINE L1 -11 6143 612 2368 272 5 13 chr5 100397366 100398120 -102687412 - L1P LINE L1 -3129 3017 2270 1325 226 7 24 chr5 100398124 100398420 -102687112 - AluJo SINE Alu -21 291 1 634 235 107 56 chr5 100399527 100399761 -102685771 + MIR SINE MIR 17 262 0 710 274 140 60 chr5 100399980 100400444 -102685088 - MLT1G1 LTR MaLR -20 575 75 211 211 58 19 chr5 100401441 100401493 -102684039 - L3b LINE CR1 -244 1339 1286 232 312 72 0 chr5 100401661 100401786 -102683746 - L1MC4 LINE L1 0 8042 7909 * 639 268 79 44 chr5 100401776 100402360 -102683172 - L1MC5 LINE L1 -218 7743 7249 1352 235 56 66 chr5 100402365 100403053 -102682479 - L1MC4 LINE L1 -765 7196 6546 2121 122 0 10 chr5 100403106 100403409 -102682123 - AluSx SINE Alu -11 301 2 247 151 0 123 chr5 100403587 100403660 -102681872 - L1MC4a LINE L1 -1451 6357 6294 230 282 282 11 chr5 100403728 100403902 -102681630 + L1MC4a LINE L1 5949 6169 -1639 661 231 97 64 chr5 100403925 100404254 -102681278 - L2 LINE L2 -1004 2310 1971 290 228 200 14 chr5 100405367 100405512 -102680020 - L1ME4a LINE L1 -16 6105 5934 25 31 0 0 chr5 100405625 100405657 -102679875 + AT_rich Low_complexity Low_complexity 1 32 0 909 271 116 62 chr5 100405730 100406265 -102679267 - MLT1G LTR MaLR -7 583 20 885 60 45 0 chr5 100406508 100406641 -102678891 - L1MA3 LINE L1 0 6305 6167 2014 136 0 14 chr5 100406660 100406954 -102678578 + AluSx SINE Alu 1 290 -22 527 243 35 80 chr5 100407342 100407568 -102677964 - MIR SINE MIR 0 262 47 3346 51 53 2 chr5 100407595 100408044 -102677488 + L1PB1 LINE L1 5565 6036 -115 881 41 0 32 chr5 100408042 100408165 -102677367 - L1PA6 LINE L1 -991 5155 5037 * 7035 58 1 3 chr5 100408165 100409151 -102676381 + L1PA6 LINE L1 5157 6143 -11 888 104 8 8 chr5 100409161 100409295 -102676237 + L1PB1 LINE L1 6018 6151 0 294 315 0 3 chr5 100409424 100409570 -102675962 - L1MA10 LINE L1 -1 6333 6033 2100 135 46 0 chr5 100409706 100410031 -102675501 + THE1C LTR MaLR 1 340 -35 6691 58 3 49 chr5 100410035 100411943 -102673589 - SVA Other Other -799 1384 1 204 67 0 0 chr5 100411943 100411973 -102673559 + (GGGAGA)n Simple_repeat Simple_repeat 2 31 0 241 158 0 0 chr5 100411973 100412011 -102673521 + THE1C LTR MaLR 387 424 -4 210 150 33 17 chr5 100412806 100412866 -102672666 + GA-rich Low_complexity Low_complexity 3 63 0 326 229 12 24 chr5 100413282 100413365 -102672167 + L2 LINE L2 3232 3313 0 29 0 0 0 chr5 100414361 100414390 -102671142 + AT_rich Low_complexity Low_complexity 1 29 0 4471 63 2 2 chr5 100415261 100415833 -102669699 - L1PA6 LINE L1 -4 6150 5579 2284 92 3 3 chr5 100416057 100416352 -102669180 + AluSp SINE Alu 1 295 -18 253 239 14 134 chr5 100416664 100416806 -102668726 - MIR SINE MIR -73 189 65 2699 161 19 2 chr5 100417414 100417885 -102667647 + L1MC3 LINE L1 7150 7628 -157 323 285 15 36 chr5 100418633 100418770 -102666762 - MIR SINE MIR -80 182 49 220 220 0 0 chr5 100419904 100419954 -102665578 + T-rich Low_complexity Low_complexity 1 50 0 663 244 22 49 chr5 100420136 100420361 -102665171 - Charlie8 DNA MER1_type -2161 256 38 2302 75 0 0 chr5 100421257 100421539 -102663993 + AluSc SINE Alu 24 305 -4 900 241 23 19 chr5 100421732 100421997 -102663535 - LTR37B LTR ERV1 -5 463 198 285 296 30 37 chr5 100422447 100422582 -102662950 - L2 LINE L2 -5 3308 3175 923 268 20 30 chr5 100422836 100423131 -102662401 - HAL1 LINE L1 -634 1873 1582 2798 275 80 70 chr5 100423168 100424961 -102660571 + HAL1 LINE L1 71 1880 -627 35 71 0 0 chr5 100425391 100425461 -102660071 + AT_rich Low_complexity Low_complexity 1 70 0 491 253 121 11 chr5 100426836 100427010 -102658522 - MLT1K LTR MaLR -22 566 374 596 301 66 19 chr5 100428547 100428760 -102656772 + MIR SINE MIR 2 224 -38 592 285 50 22 chr5 100428979 100429158 -102656374 + MER5A DNA MER1_type 1 184 -5 2670 122 30 92 chr5 100432668 100433234 -102652298 - L1MA4 LINE L1 0 6300 5770 2299 105 0 0 chr5 100433401 100433705 -102651827 - AluSg SINE Alu -6 304 1 38 39 0 0 chr5 100435117 100435169 -102650363 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 100435323 100435344 -102650188 + AT_rich Low_complexity Low_complexity 1 21 0 7601 20 8 0 chr5 100435694 100436926 -102648606 - L1PA4 LINE L1 0 6155 4924 213 217 0 0 chr5 100437894 100437940 -102647592 + (ATG)n Simple_repeat Simple_repeat 2 47 0 381 295 36 0 chr5 100437940 100438079 -102647453 - MIR SINE MIR 0 262 119 234 222 0 0 chr5 100438347 100438401 -102647131 + Charlie8 DNA MER1_type 2360 2413 -4 237 325 38 38 chr5 100438435 100438515 -102647017 - MIR3 SINE MIR -123 85 6 2249 104 7 0 chr5 100438830 100439139 -102646393 - AluSx SINE Alu -1 311 1 1677 184 0 4 chr5 100439503 100439806 -102645726 - AluJb SINE Alu 0 307 6 803 240 61 55 chr5 100440148 100440643 -102644889 + L1M4 LINE L1 2908 3405 -2741 2563 187 50 14 chr5 100440659 100441156 -102644376 - MER21B LTR ERV1 -11 852 338 7186 98 0 9 chr5 100441257 100442302 -102643230 + L1P LINE L1 969 2004 -4142 342 213 24 49 chr5 100442402 100442546 -102642986 + L1M4 LINE L1 1537 1780 -4864 1697 177 58 0 chr5 100442546 100442840 -102642692 + AluSx SINE Alu 1 311 -1 342 213 24 49 chr5 100442840 100442857 -102642675 + L1M4 LINE L1 1780 1796 -4848 1978 245 28 48 chr5 100443007 100443169 -102642363 + L1M2b LINE L1 15 179 -7030 2188 149 68 24 chr5 100443169 100443579 -102641953 - MSTA LTR MaLR 0 428 1 1978 245 28 48 chr5 100443579 100444057 -102641475 + L1M2b LINE L1 179 642 -6567 523 308 129 13 chr5 100444664 100444888 -102640644 + MIR SINE MIR 2 251 -11 180 200 0 0 chr5 100445801 100445846 -102639686 + A-rich Low_complexity Low_complexity 1 45 0 405 0 0 0 chr5 100447131 100447176 -102638356 + (CA)n Simple_repeat Simple_repeat 2 46 0 1433 199 52 3 chr5 100447320 100447434 -102638098 + AluJo SINE Alu 2 109 -203 351 0 0 0 chr5 100447434 100447473 -102638059 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1433 199 52 3 chr5 100447473 100447645 -102637887 + AluJo SINE Alu 109 302 -10 27 0 0 0 chr5 100448317 100448344 -102637188 + AT_rich Low_complexity Low_complexity 1 27 0 486 271 98 30 chr5 100449019 100449314 -102636218 - HAL1 LINE L1 -787 1720 1406 180 125 0 0 chr5 100451649 100451681 -102633851 + (TA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr5 100452135 100452158 -102633374 + AT_rich Low_complexity Low_complexity 1 23 0 1615 185 7 13 chr5 100453634 100453936 -102631596 - AluJb SINE Alu -12 300 1 610 238 64 12 chr5 100455060 100455232 -102630300 - MIR SINE MIR -1 261 81 327 85 0 0 chr5 100457234 100457281 -102628251 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr5 100458584 100458612 -102626920 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 100460490 100460511 -102625021 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 100463077 100463105 -102622427 + AT_rich Low_complexity Low_complexity 1 28 0 237 260 0 0 chr5 100464301 100464378 -102621154 + (TA)n Simple_repeat Simple_repeat 1 77 0 2355 100 0 0 chr5 100464925 100465234 -102620298 - AluSc SINE Alu 0 309 1 383 146 12 37 chr5 100466565 100466647 -102618885 - L1MC4 LINE L1 -140 7902 7823 267 330 0 0 chr5 100466804 100466904 -102618628 + CT-rich Low_complexity Low_complexity 3 102 0 2153 79 11 0 chr5 100467182 100467448 -102618084 - AluSc SINE Alu -24 285 17 2137 124 0 0 chr5 100467653 100467951 -102617581 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 100468005 100468026 -102617506 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 100468032 100468056 -102617476 + (GA)n Simple_repeat Simple_repeat 1 24 0 236 313 0 0 chr5 100468380 100468444 -102617088 - L1ME LINE L1 -496 5625 5562 23 54 0 0 chr5 100468522 100468559 -102616973 + AT_rich Low_complexity Low_complexity 1 37 0 237 108 0 0 chr5 100468868 100468905 -102616627 + (TG)n Simple_repeat Simple_repeat 2 38 0 350 296 78 7 chr5 100468940 100469082 -102616450 - L2 LINE L2 -159 3113 2962 21 57 0 0 chr5 100472159 100472194 -102613338 + AT_rich Low_complexity Low_complexity 1 35 0 1833 265 36 36 chr5 100473215 100473845 -102611687 - L1ME3A LINE L1 -20 6150 5521 306 173 7 194 chr5 100473927 100474066 -102611466 - L1ME4a LINE L1 -16 6105 5993 249 240 124 39 chr5 100474118 100474247 -102611285 - L1ME4a LINE L1 0 6121 5982 1145 201 10 99 chr5 100475292 100475606 -102609926 + AluJo SINE Alu 1 286 -16 22 35 0 0 chr5 100475610 100475639 -102609893 + AT_rich Low_complexity Low_complexity 1 29 0 186 133 0 0 chr5 100475736 100475766 -102609766 + (TG)n Simple_repeat Simple_repeat 2 31 0 181 365 75 0 chr5 100476510 100476617 -102608915 - L2 LINE L2 -1 3312 3198 23 54 0 0 chr5 100476817 100476854 -102608678 + AT_rich Low_complexity Low_complexity 1 37 0 3002 178 68 31 chr5 100477543 100477913 -102607619 + Charlie1 DNA MER1_type 2027 2382 -379 2348 84 10 0 chr5 100477913 100478221 -102607311 + AluY SINE Alu 1 311 0 3002 178 68 31 chr5 100478221 100478559 -102606973 + Charlie1 DNA MER1_type 2382 2761 0 827 117 0 0 chr5 100478750 100478861 -102606671 + FLAM_C SINE Alu 1 111 -32 32 26 0 0 chr5 100478867 100478906 -102606626 + AT_rich Low_complexity Low_complexity 1 39 0 195 254 0 18 chr5 100479099 100479154 -102606378 + L2 LINE L2 3219 3272 0 2472 59 0 13 chr5 100480350 100480655 -102604877 - AluY SINE Alu -10 301 1 42499 37 22 1 chr5 100480773 100486800 -102598732 - L1PA3 LINE L1 0 6155 1 207 182 0 121 chr5 100487443 100487509 -102598023 + L2 LINE L2 2085 2142 -1172 209 206 151 0 chr5 100488085 100488158 -102597374 + L2 LINE L2 2139 2222 -1092 491 282 55 50 chr5 100488175 100488377 -102597155 + L2 LINE L2 2192 2394 -920 447 287 61 22 chr5 100488484 100488665 -102596867 + ERVL LTR ERVL 3756 3943 -1711 584 264 28 24 chr5 100488755 100488939 -102596593 + ERVL LTR ERVL 4083 4313 -1401 782 330 62 26 chr5 100488978 100489447 -102596085 + ERVL LTR ERVL 4377 4862 -902 204 391 97 39 chr5 100490242 100490449 -102595083 + L2 LINE L2 3036 3254 -18 1746 172 53 25 chr5 100491629 100491984 -102593548 - MLT1A1 LTR MaLR 0 365 1 1534 150 89 14 chr5 100493700 100494013 -102591519 + AluJo SINE Alu 12 345 0 481 229 192 21 chr5 100495004 100495244 -102590288 + MER46C DNA MER2_type 2 282 -56 21 0 0 0 chr5 100495307 100495328 -102590204 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 100496592 100496627 -102588905 + AT_rich Low_complexity Low_complexity 1 35 0 311 301 66 44 chr5 100496629 100496653 -102588879 - MIR SINE MIR -65 197 175 1996 201 8 5 chr5 100496653 100497046 -102588486 - MSTD LTR MaLR -2 394 1 311 301 66 44 chr5 100497046 100497157 -102588375 - MIR SINE MIR -87 175 59 21 71 0 0 chr5 100497373 100497415 -102588117 + AT_rich Low_complexity Low_complexity 1 42 0 241 224 212 0 chr5 100497857 100497942 -102587590 - MIR SINE MIR 0 262 160 1940 120 3 21 chr5 100498254 100498545 -102586987 + AluSx SINE Alu 25 310 -2 360 152 0 0 chr5 100499963 100500029 -102585503 + CT-rich Low_complexity Low_complexity 1 66 0 2165 78 11 0 chr5 100500029 100500300 -102585232 - AluSp SINE Alu -11 302 29 602 274 82 57 chr5 100500300 100500617 -102584915 - MLT1I LTR MaLR -73 336 12 959 176 0 12 chr5 100501372 100501537 -102583995 - FRAM SINE Alu -13 163 1 21 57 0 0 chr5 100502417 100502452 -102583080 + AT_rich Low_complexity Low_complexity 1 35 0 1292 185 122 25 chr5 100502664 100502983 -102582549 - MLT1A1 LTR MaLR -15 350 1 384 261 72 0 chr5 100503331 100503442 -102582090 + L2 LINE L2 3187 3305 -8 1837 117 0 8 chr5 100503463 100503720 -102581812 + AluSx SINE Alu 1 255 -57 419 0 0 19 chr5 100503760 100503812 -102581720 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 22 0 0 0 chr5 100504357 100504379 -102581153 + AT_rich Low_complexity Low_complexity 1 22 0 7574 28 8 0 chr5 100504379 100505608 -102579924 - L1PA3 LINE L1 -3 6152 4920 7630 27 6 0 chr5 100505608 100506511 -102579021 + L1PA3 LINE L1 4037 4944 -1202 1887 89 8 8 chr5 100506519 100506787 -102578745 - AluSc SINE Alu 0 298 31 207 0 0 0 chr5 100507495 100507518 -102578014 + (T)n Simple_repeat Simple_repeat 1 23 0 508 350 86 6 chr5 100508448 100508762 -102576770 + MER102b DNA MER1_type 2 340 -1 213 121 0 0 chr5 100509473 100509506 -102576026 + (TA)n Simple_repeat Simple_repeat 2 34 0 2293 117 0 0 chr5 100509540 100509847 -102575685 - AluSq SINE Alu -6 307 1 237 65 0 0 chr5 100509931 100509962 -102575570 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 1342 160 147 39 chr5 100511386 100511693 -102573839 + MER2 DNA MER2_type 6 345 0 28 29 0 0 chr5 100513875 100513910 -102571622 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 100514928 100514953 -102570579 + AT_rich Low_complexity Low_complexity 1 25 0 554 251 63 31 chr5 100515511 100515702 -102569830 + MIR SINE MIR 59 255 -7 249 272 29 58 chr5 100516053 100516175 -102569357 - MIR SINE MIR -28 180 54 385 302 151 19 chr5 100516414 100516626 -102568906 - MIR SINE MIR 0 262 23 456 187 6 111 chr5 100517329 100517500 -102568032 + MER5C DNA MER1_type 172 324 0 228 163 0 0 chr5 100519737 100519780 -102565752 + (TG)n Simple_repeat Simple_repeat 2 44 0 187 333 0 77 chr5 100522126 100522243 -102563289 + L2 LINE L2 2567 2674 -640 21 0 0 0 chr5 100522403 100522424 -102563108 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 100522660 100522681 -102562851 + AT_rich Low_complexity Low_complexity 1 21 0 2276 90 3 0 chr5 100522981 100523270 -102562262 - AluSc SINE Alu -19 290 1 700 282 55 32 chr5 100524064 100524284 -102561248 - MLT1H LTR MaLR -302 247 23 629 163 32 0 chr5 100524605 100524728 -102560804 - L1PA7 LINE L1 -5 6149 6023 180 0 0 0 chr5 100525030 100525050 -102560482 + (TTG)n Simple_repeat Simple_repeat 2 21 0 190 383 28 28 chr5 100526424 100526565 -102558967 - MIR SINE MIR -38 224 84 30 77 0 0 chr5 100526697 100526762 -102558770 + AT_rich Low_complexity Low_complexity 1 65 0 452 297 31 8 chr5 100528098 100528226 -102557306 - MIR SINE MIR -112 150 20 1759 103 23 60 chr5 100529949 100530250 -102555282 - AluSx SINE Alu -22 290 1 181 306 75 75 chr5 100531191 100531325 -102554207 - MIR3 SINE MIR -13 195 62 21 0 0 0 chr5 100531325 100531346 -102554186 + AT_rich Low_complexity Low_complexity 1 21 0 259 342 54 16 chr5 100531646 100531830 -102553702 - MLT1K LTR MaLR -24 564 374 346 243 93 74 chr5 100532263 100532635 -102552897 - L1MC/D LINE L1 -605 5516 5153 558 281 83 45 chr5 100532955 100533268 -102552264 - L1MC/D LINE L1 -1334 4812 4488 764 313 58 35 chr5 100533275 100533671 -102551861 - LTR16C LTR ERVL 0 491 87 619 249 86 23 chr5 100533849 100534070 -102551462 + MIR SINE MIR 1 235 -27 527 279 93 36 chr5 100534183 100534516 -102551016 - L1MC/D LINE L1 -1907 4239 3888 766 32 0 0 chr5 100535471 100535564 -102549968 + L1PA5 LINE L1 6059 6151 -3 760 127 0 0 chr5 100535594 100535704 -102549828 - AluSg/x SINE Alu -9 300 191 2010 68 0 38 chr5 100535704 100535967 -102549565 - AluY SINE Alu -58 253 1 922 161 0 7 chr5 100535970 100536113 -102549419 - AluSq/x SINE Alu -171 142 1 2111 182 55 2 chr5 100536131 100536587 -102548945 - L1MB4 LINE L1 0 6180 5701 189 0 0 0 chr5 100536594 100536615 -102548917 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 31 44 0 0 chr5 100536856 100536901 -102548631 + AT_rich Low_complexity Low_complexity 1 45 0 1560 209 75 50 chr5 100537099 100537218 -102548314 - L1ME3 LINE L1 -1 6161 6046 1639 143 64 0 chr5 100537218 100537529 -102548003 + AluSx SINE Alu 1 328 0 1560 209 75 50 chr5 100537529 100537848 -102547684 - L1ME3 LINE L1 -116 6046 5711 30 27 0 0 chr5 100538779 100538816 -102546716 + AT_rich Low_complexity Low_complexity 1 37 0 2248 71 0 0 chr5 100539398 100539755 -102545777 + AluY SINE Alu 14 370 0 200 291 51 34 chr5 100539918 100540035 -102545497 - L2 LINE L2 -222 3050 2932 1081 322 95 36 chr5 100540368 100540591 -102544941 - L2 LINE L2 -816 2498 2290 2458 63 0 16 chr5 100540591 100540909 -102544623 + AluSp SINE Alu 1 313 0 1081 322 95 36 chr5 100540909 100541571 -102543961 - L2 LINE L2 -1024 2290 1561 23 86 0 0 chr5 100542253 100542311 -102543221 + AT_rich Low_complexity Low_complexity 1 58 0 2057 122 3 0 chr5 100542405 100542691 -102542841 - AluSx SINE Alu -25 287 1 26 0 0 0 chr5 100542769 100542795 -102542737 + AT_rich Low_complexity Low_complexity 1 26 0 1613 316 160 20 chr5 100544074 100544813 -102540719 + L2 LINE L2 1167 1801 -1513 276 30 0 0 chr5 100544813 100544846 -102540686 + (TG)n Simple_repeat Simple_repeat 1 33 0 1613 316 160 20 chr5 100544846 100545257 -102540275 + L2 LINE L2 1801 2478 -836 1192 170 10 5 chr5 100545268 100545474 -102540058 - AluJb SINE Alu -30 282 76 539 362 116 24 chr5 100545475 100545783 -102539749 + L2 LINE L2 2467 2832 -482 575 208 31 0 chr5 100545783 100545913 -102539619 - MER94 DNA DNA 0 134 1 539 362 116 24 chr5 100545913 100546060 -102539472 + L2 LINE L2 2832 2964 -350 187 295 221 0 chr5 100546148 100546243 -102539289 + L2 LINE L2 3155 3270 -43 2138 80 35 3 chr5 100548033 100548319 -102537213 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 100548549 100548573 -102536959 + AT_rich Low_complexity Low_complexity 1 24 0 1932 158 124 16 chr5 100549225 100549611 -102535921 - MSTA LTR MaLR 0 428 1 906 184 52 175 chr5 100549938 100550173 -102535359 - Charlie1b DNA MER1_type -2328 433 171 1178 246 32 18 chr5 100550173 100550457 -102535075 - AluJo SINE Alu -13 289 2 906 184 52 175 chr5 100550457 100550479 -102535053 - Charlie1b DNA MER1_type -2590 171 148 2002 159 48 2 chr5 100550479 100550876 -102534656 - L1MA9 LINE L1 0 6312 5898 906 184 52 175 chr5 100550876 100551096 -102534436 - Charlie1b DNA MER1_type -2613 148 14 182 317 58 19 chr5 100551103 100551207 -102534325 - L2 LINE L2 -550 2764 2657 13457 211 54 24 chr5 100551817 100552744 -102532788 - L1MA7 LINE L1 -2 6493 5595 2044 87 94 0 chr5 100552744 100553020 -102532512 - AluSg SINE Alu -8 302 1 13457 211 54 24 chr5 100553020 100557918 -102527614 - L1MA7 LINE L1 -900 5595 827 1652 282 65 26 chr5 100558621 100559241 -102526291 - L1MA7 LINE L1 -5637 644 1 400 349 58 82 chr5 100560215 100560642 -102524890 - L2 LINE L2 -10 3262 2846 416 260 135 50 chr5 100560812 100561255 -102524277 - L2 LINE L2 -626 2688 2208 2392 87 0 0 chr5 100561634 100561933 -102523599 - AluY SINE Alu -12 299 1 1627 187 26 0 chr5 100562171 100562444 -102523088 - AluJo SINE Alu -32 280 1 23 0 0 0 chr5 100562605 100562628 -102522904 + AT_rich Low_complexity Low_complexity 1 23 0 214 263 0 18 chr5 100564374 100564431 -102521101 + GA-rich Low_complexity Low_complexity 2 57 0 258 243 68 0 chr5 100564897 100564971 -102520561 - MLT1L LTR MaLR -339 276 198 1002 263 103 46 chr5 100564983 100565494 -102520038 - L2 LINE L2 0 3313 2771 2766 180 29 16 chr5 100565494 100566049 -102519483 - MER68 LTR ERV1 0 562 1 1002 263 103 46 chr5 100566049 100566239 -102519293 - L2 LINE L2 -542 2771 2593 343 240 83 25 chr5 100566239 100566360 -102519172 - L2 LINE L2 -876 2438 2311 1237 184 65 10 chr5 100566434 100566728 -102518804 - MER33 DNA MER1_type 0 324 15 594 268 121 26 chr5 100566818 100567090 -102518442 + L2 LINE L2 2991 3288 -25 207 295 248 0 chr5 100568260 100568365 -102517167 - MIR SINE MIR -61 147 17 276 161 0 0 chr5 100568407 100568463 -102517069 - L1ME4a LINE L1 -5 6116 6061 573 326 128 8 chr5 100569268 100569651 -102515881 - LTR16A LTR ERVL 0 450 22 710 152 69 164 chr5 100570201 100570432 -102515100 - MER58A DNA MER1_type -15 209 1 2761 66 0 3 chr5 100570455 100570817 -102514715 - L1PA13 LINE L1 0 6163 5803 1204 109 0 0 chr5 100570817 100570992 -102514540 + L1PA13 LINE L1 5598 5772 -396 209 194 0 0 chr5 100573824 100573860 -102511672 + GA-rich Low_complexity Low_complexity 1 36 0 299 208 33 17 chr5 100573916 100574036 -102511496 + (TATAA)n Simple_repeat Simple_repeat 2 123 0 22 0 0 0 chr5 100574198 100574220 -102511312 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 100574357 100574379 -102511153 + AT_rich Low_complexity Low_complexity 1 22 0 2238 68 0 4 chr5 100576236 100576517 -102509015 + AluY SINE Alu 24 303 -8 213 258 0 0 chr5 100577499 100577565 -102507967 + CT-rich Low_complexity Low_complexity 3 68 0 2291 104 0 3 chr5 100577846 100578155 -102507377 + AluSc SINE Alu 1 308 -1 2427 84 0 10 chr5 100578155 100578465 -102507067 + AluSg SINE Alu 1 307 -3 754 309 70 36 chr5 100580907 100581321 -102504211 - MLT1J2 LTR MaLR 0 450 23 2764 159 4 0 chr5 100581681 100582135 -102503397 - L1PA16 LINE L1 -1 6165 5710 255 320 41 0 chr5 100582598 100582720 -102502812 - L1PBb LINE L1 -5956 893 767 308 334 92 76 chr5 100582904 100583392 -102502140 - L1PBb LINE L1 -6340 509 14 378 0 0 0 chr5 100583592 100583634 -102501898 + (CA)n Simple_repeat Simple_repeat 1 42 0 788 162 97 0 chr5 100583669 100583854 -102501678 - L1MA4 LINE L1 -6 6294 6092 964 190 5 31 chr5 100583856 100584051 -102501481 - AluJb SINE Alu -3 309 120 32 0 0 0 chr5 100584051 100584083 -102501449 + AT_rich Low_complexity Low_complexity 1 32 0 2358 60 3 3 chr5 100584084 100584368 -102501164 - AluY SINE Alu -24 287 4 189 384 73 12 chr5 100584400 100584564 -102500968 + L2 LINE L2 2358 2531 -783 285 286 44 16 chr5 100585227 100585409 -102500123 + L1M4 LINE L1 4630 4816 -1330 745 334 40 3 chr5 100586945 100587292 -102498240 - LTR16A LTR ERVL 0 450 91 260 243 0 0 chr5 100587455 100587525 -102498007 + LTR16A LTR ERVL 317 386 -64 23 33 0 0 chr5 100587836 100587866 -102497666 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 100587906 100587939 -102497593 + AT_rich Low_complexity Low_complexity 1 33 0 2482 96 8 6 chr5 100588211 100588567 -102496965 - THE1B LTR MaLR -1 363 7 243 0 0 0 chr5 100588852 100588879 -102496653 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 333 339 72 28 chr5 100589446 100589626 -102495906 + MIR SINE MIR 20 207 -55 235 291 45 18 chr5 100589952 100590062 -102495470 + MER103 DNA DNA 3 115 -51 1754 240 22 5 chr5 100590309 100590718 -102494814 - MER82 DNA MER2_type -1 652 237 467 259 61 0 chr5 100590739 100590870 -102494662 + MER82 DNA MER2_type 508 646 -7 2134 120 0 7 chr5 100591055 100591347 -102494185 + AluSx SINE Alu 9 298 -14 25 0 0 0 chr5 100592616 100592641 -102492891 + AT_rich Low_complexity Low_complexity 1 25 0 1768 168 3 7 chr5 100593650 100593935 -102491597 - AluJo SINE Alu -23 289 6 419 270 26 85 chr5 100594384 100594573 -102490959 + MIR SINE MIR 66 243 -19 2071 137 153 5 chr5 100595163 100595536 -102489996 - MSTA LTR MaLR 0 428 1 228 200 0 0 chr5 100596253 100596308 -102489224 + (TG)n Simple_repeat Simple_repeat 1 55 0 221 0 35 0 chr5 100596366 100596395 -102489137 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr5 100597431 100597459 -102488073 + AT_rich Low_complexity Low_complexity 1 28 0 1040 217 21 46 chr5 100598855 100599095 -102486437 - AluJo SINE Alu 0 312 79 21 0 0 0 chr5 100600613 100600634 -102484898 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 100600670 100600691 -102484841 + AT_rich Low_complexity Low_complexity 1 21 0 1265 312 102 46 chr5 100602457 100602909 -102482623 - L2 LINE L2 0 3313 2888 7138 52 7 0 chr5 100602909 100604573 -102480959 + L1PA6 LINE L1 4468 6152 -2 1265 312 102 46 chr5 100604573 100605353 -102480179 - L2 LINE L2 -425 2888 1950 2496 77 6 3 chr5 100605741 100606053 -102479479 - AluSq SINE Alu 0 313 1 2319 200 17 9 chr5 100606964 100607004 -102478528 - MLT2C2 LTR ERVL 0 464 426 393 95 0 0 chr5 100607004 100607067 -102478465 + (CA)n Simple_repeat Simple_repeat 2 64 0 2319 200 17 9 chr5 100607067 100607486 -102478046 - MLT2C2 LTR ERVL -38 426 1 456 149 180 37 chr5 100610096 100610257 -102475275 - MER105 DNA DNA -20 184 1 3283 160 25 8 chr5 100610671 100611266 -102474266 - MER6A DNA MER2_type 0 605 1 317 304 62 18 chr5 100612624 100612736 -102472796 - L2 LINE L2 -18 3254 3138 30108 104 19 56 chr5 100612852 100619243 -102466289 + L1PA7 LINE L1 12 6152 -2 1980 109 3 85 chr5 100620353 100620693 -102464839 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 100621193 100621214 -102464318 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 100621291 100621321 -102464211 + AT_rich Low_complexity Low_complexity 1 30 0 189 171 0 0 chr5 100622154 100622189 -102463343 + (TG)n Simple_repeat Simple_repeat 1 35 0 1937 175 3 0 chr5 100622283 100622591 -102462941 + AluSx SINE Alu 1 309 -3 219 280 0 53 chr5 100622991 100623066 -102462466 - MIR3 SINE MIR -13 195 125 21 36 0 0 chr5 100623262 100623290 -102462242 + AT_rich Low_complexity Low_complexity 1 28 0 2243 103 6 6 chr5 100625002 100625313 -102460219 - AluSx SINE Alu -1 311 1 311 259 25 0 chr5 100625357 100625438 -102460094 - L1MC4 LINE L1 -143 7899 7817 513 234 57 8 chr5 100626451 100626575 -102458957 + MIR SINE MIR 21 150 -112 1535 142 0 4 chr5 100626775 100627000 -102458532 + AluSx SINE Alu 1 224 -88 2019 122 2 46 chr5 100627100 100627494 -102458038 + L1 LINE L1 2964 3340 -4225 1625 167 33 38 chr5 100627526 100627846 -102457686 + L1 LINE L1 5561 5880 -1685 1818 194 0 3 chr5 100627846 100628145 -102457387 + AluJb SINE Alu 1 298 -14 1625 167 33 38 chr5 100628145 100628220 -102457312 + L1 LINE L1 5880 5954 -1611 2256 69 0 33 chr5 100628356 100628659 -102456873 - AluY SINE Alu -16 295 3 549 300 90 14 chr5 100628672 100628699 -102456833 - MIR SINE MIR -21 241 217 450 0 0 0 chr5 100628699 100628749 -102456783 + (CA)n Simple_repeat Simple_repeat 2 51 0 549 300 90 14 chr5 100628749 100628944 -102456588 - MIR SINE MIR -45 217 2 242 280 119 34 chr5 100631037 100631155 -102454377 - L3b LINE CR1 -86 1497 1370 22 0 0 0 chr5 100631262 100631284 -102454248 + AT_rich Low_complexity Low_complexity 1 22 0 2266 88 7 3 chr5 100631350 100631647 -102453885 - AluSg SINE Alu -12 298 1 988 179 17 8 chr5 100631757 100631997 -102453535 - L1MA7 LINE L1 0 6291 6050 21 36 0 0 chr5 100632240 100632268 -102453264 + AT_rich Low_complexity Low_complexity 1 28 0 2509 63 0 16 chr5 100632271 100632587 -102452945 + AluY SINE Alu 1 311 0 1987 154 44 11 chr5 100633859 100634222 -102451310 + THE1C LTR MaLR 1 375 0 540 316 67 9 chr5 100634597 100634822 -102450710 - L2 LINE L2 -1 3312 3075 49 43 0 0 chr5 100635770 100635840 -102449692 + AT_rich Low_complexity Low_complexity 1 70 0 42588 37 21 1 chr5 100635840 100641869 -102443663 - L1PA4 LINE L1 -3 6152 1 5704 36 0 0 chr5 100641869 100642556 -102442976 - L1P LINE L1 -1307 4839 4153 22 0 0 0 chr5 100643458 100643480 -102442052 + AT_rich Low_complexity Low_complexity 1 22 0 227 345 20 14 chr5 100643605 100643753 -102441779 - L1MC4 LINE L1 -1040 7002 6854 647 180 78 63 chr5 100644074 100644280 -102441252 - MER6B DNA MER2_type -1 209 1 2068 148 0 0 chr5 100644360 100644663 -102440869 - AluSx SINE Alu -9 303 1 398 347 119 0 chr5 100645828 100646047 -102439485 + MIR SINE MIR 18 262 0 216 275 188 0 chr5 100646299 100646379 -102439153 - MIR SINE MIR -95 113 19 32 67 0 0 chr5 100647682 100647742 -102437790 + AT_rich Low_complexity Low_complexity 1 60 0 371 379 38 5 chr5 100647914 100648125 -102437407 - L1ME3 LINE L1 -213 5949 5732 1454 244 62 66 chr5 100650147 100650660 -102434872 + MLT2B3 LTR ERVL 5 515 -39 327 213 0 0 chr5 100650673 100650753 -102434779 + (CA)n Simple_repeat Simple_repeat 2 81 0 6880 121 14 27 chr5 100650846 100652655 -102432877 - L1MA3 LINE L1 0 7724 5939 5277 143 117 12 chr5 100652757 100653855 -102431677 - L1MA3 LINE L1 -4729 2836 1624 1730 183 43 8 chr5 100653857 100654251 -102431281 + L1MD1 LINE L1 1680 2087 -4453 4566 176 32 3 chr5 100654252 100655117 -102430415 + L1MD1 LINE L1 5739 6628 -8 1815 134 4 0 chr5 100655669 100655938 -102429594 - AluSx SINE Alu -2 310 41 390 278 88 15 chr5 100656289 100656494 -102429038 - L1ME3A LINE L1 -219 5951 5732 1259 297 106 60 chr5 100656569 100657066 -102428466 + L2 LINE L2 1968 2441 -872 524 196 116 9 chr5 100657066 100657178 -102428354 + FLAM_A SINE Alu 1 124 -9 1259 297 106 60 chr5 100657178 100657512 -102428020 + L2 LINE L2 2441 2758 -555 2188 129 0 0 chr5 100657512 100657822 -102427710 - AluY SINE Alu -1 310 1 1259 297 106 60 chr5 100657822 100658247 -102427285 + L2 LINE L2 2758 3291 -22 231 292 14 28 chr5 100659624 100659696 -102425836 + MIR3 SINE MIR 113 183 -25 29 60 0 0 chr5 100660708 100660758 -102424774 + AT_rich Low_complexity Low_complexity 1 50 0 2015 82 11 32 chr5 100660758 100661037 -102424495 + AluSx SINE Alu 21 293 -19 22 35 0 0 chr5 100661237 100661266 -102424266 + AT_rich Low_complexity Low_complexity 1 29 0 606 299 52 55 chr5 100661316 100662062 -102423470 + L1M4 LINE L1 4491 5234 -912 777 179 33 11 chr5 100662272 100662456 -102423076 + MER53 DNA DNA 2 189 0 331 261 126 0 chr5 100663534 100663645 -102421887 + MIR SINE MIR 93 217 -45 363 331 61 39 chr5 100663667 100663978 -102421554 - L1MCa LINE L1 -4708 1718 1401 1617 81 0 5 chr5 100664762 100664984 -102420548 - pTR5 LTR ERV1 -2046 392 172 305 245 31 20 chr5 100664987 100665085 -102420447 - LTR30 LTR ERV1 -80 642 544 7837 99 57 28 chr5 100665085 100666342 -102419190 - pTR5 LTR ERV1 -413 2025 733 27 49 0 0 chr5 100666887 100666928 -102418604 + AT_rich Low_complexity Low_complexity 1 41 0 1809 176 0 0 chr5 100667710 100667999 -102417533 - AluSq SINE Alu -24 289 1 388 317 21 7 chr5 100668284 100668426 -102417106 - MIR SINE MIR -96 166 23 267 288 0 0 chr5 100669140 100669206 -102416326 + L2 LINE L2 3225 3290 -23 263 194 30 30 chr5 100669302 100669369 -102416163 - L2 LINE L2 -310 2962 2896 423 0 0 0 chr5 100669412 100669459 -102416073 + (TG)n Simple_repeat Simple_repeat 1 47 0 414 0 0 0 chr5 100669458 100669504 -102416028 + (GA)n Simple_repeat Simple_repeat 1 46 0 * 184 348 0 45 chr5 100669915 100670004 -102415528 - L2 LINE L2 -2050 1264 1180 387 287 7 93 chr5 100670849 100670999 -102414533 - MER5A DNA MER1_type -18 171 35 356 274 18 92 chr5 100670854 100671018 -102414514 + MER5A DNA MER1_type 35 186 -3 * 21 0 0 0 chr5 100672541 100672562 -102412970 + AT_rich Low_complexity Low_complexity 1 21 0 240 174 275 0 chr5 100674383 100674452 -102411080 - L2 LINE L2 0 3313 3226 628 324 0 6 chr5 100674997 100675167 -102410365 + MIR SINE MIR 4 172 -90 23 78 0 0 chr5 100675363 100675414 -102410118 + AT_rich Low_complexity Low_complexity 1 51 0 1035 170 0 0 chr5 100676830 100676983 -102408549 - AluJo SINE Alu -159 153 1 393 313 153 25 chr5 100677063 100677338 -102408194 - MLT1L LTR MaLR -112 503 194 550 222 0 19 chr5 100677499 100677607 -102407925 - FLAM_C SINE Alu -32 111 6 208 255 21 0 chr5 100677608 100677655 -102407877 + L2 LINE L2 3266 3313 0 1040 123 43 0 chr5 100677769 100677931 -102407601 - AluSg/x SINE Alu -13 299 131 643 197 25 163 chr5 100677990 100678157 -102407375 + MER3 DNA MER1_type 1 127 -82 1597 119 90 54 chr5 100678157 100678435 -102407097 + AluJo SINE Alu 1 288 -24 643 197 25 163 chr5 100678435 100678506 -102407026 + MER3 DNA MER1_type 127 206 -3 1501 79 5 0 chr5 100678643 100678832 -102406700 - AluSq SINE Alu -19 294 105 403 112 0 101 chr5 100678952 100679041 -102406491 - MADE1 DNA Mariner 0 80 1 29 0 0 0 chr5 100679609 100679638 -102405894 + AT_rich Low_complexity Low_complexity 1 29 0 2276 99 0 0 chr5 100679641 100679945 -102405587 - AluY SINE Alu -7 304 1 294 194 0 0 chr5 100680692 100680759 -102404773 + (CA)n Simple_repeat Simple_repeat 1 67 0 23 54 0 0 chr5 100682473 100682510 -102403022 + AT_rich Low_complexity Low_complexity 1 37 0 205 268 36 0 chr5 100682909 100682965 -102402567 - L2 LINE L2 -257 3056 2999 28 29 0 0 chr5 100683103 100683138 -102402394 + AT_rich Low_complexity Low_complexity 1 35 0 292 272 68 0 chr5 100683163 100683266 -102402266 + L1ME3A LINE L1 6027 6136 -34 399 41 0 0 chr5 100684635 100684684 -102400848 + (TG)n Simple_repeat Simple_repeat 2 50 0 189 214 0 0 chr5 100686522 100686564 -102398968 + (TTG)n Simple_repeat Simple_repeat 2 43 0 696 231 39 0 chr5 100688106 100688262 -102397270 - MIR SINE MIR -94 168 7 533 322 99 13 chr5 100688544 100688777 -102396755 - MIR SINE MIR -4 258 6 22 0 0 0 chr5 100689606 100689628 -102395904 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 100690763 100690790 -102394742 + (TG)n Simple_repeat Simple_repeat 2 28 0 275 103 0 0 chr5 100690838 100690877 -102394655 + tRNA-Thr-ACA tRNA tRNA 1 39 -37 248 314 34 51 chr5 100690939 100691057 -102394475 - MIR SINE MIR -75 187 72 185 260 137 41 chr5 100691402 100691475 -102394057 + L2 LINE L2 3136 3215 -57 1127 112 24 68 chr5 100691937 100692142 -102393390 + AluJo SINE Alu 113 308 -4 533 301 114 46 chr5 100692227 100692889 -102392643 + L2 LINE L2 2589 3290 -23 2280 77 17 0 chr5 100692905 100693204 -102392328 + AluY SINE Alu 1 304 -7 774 148 7 84 chr5 100693359 100693514 -102392018 + FRAM SINE Alu 1 142 -34 29 0 0 0 chr5 100696150 100696179 -102389353 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr5 100697959 100697990 -102387542 + AT_rich Low_complexity Low_complexity 1 31 0 1930 132 3 17 chr5 100697990 100698306 -102387226 + AluSx SINE Alu 1 312 0 336 296 266 5 chr5 100698382 100698581 -102386951 - MIR SINE MIR 0 262 12 1341 182 68 11 chr5 100700071 100700335 -102385197 - AluJo SINE Alu -33 279 1 27 29 0 0 chr5 100701131 100701165 -102384367 + AT_rich Low_complexity Low_complexity 1 34 0 1074 193 23 28 chr5 100702433 100702651 -102382881 - MER20 DNA MER1_type -1 218 2 478 283 9 0 chr5 100703089 100703202 -102382330 - MER81 DNA DNA 0 114 1 321 135 0 0 chr5 100704192 100704244 -102381288 + (GGGA)n Simple_repeat Simple_repeat 4 55 0 306 200 0 15 chr5 100704739 100704804 -102380728 + MER5A DNA MER1_type 47 110 -79 909 323 105 38 chr5 100704840 100705909 -102379623 + L2 LINE L2 2164 3301 -12 24 0 0 0 chr5 100707970 100707994 -102377538 + AT_rich Low_complexity Low_complexity 1 24 0 224 362 101 40 chr5 100708274 100708473 -102377059 - L3 LINE CR1 -404 1173 963 645 304 74 8 chr5 100708714 100708957 -102376575 + MIR SINE MIR 2 260 -2 418 288 64 43 chr5 100708998 100709249 -102376283 - L1ME LINE L1 -508 5658 5381 48 0 0 0 chr5 100709485 100709533 -102375999 + AT_rich Low_complexity Low_complexity 1 48 0 410 211 81 62 chr5 100710816 100710862 -102374670 - L1MA10 LINE L1 -3 6331 6286 522 239 63 73 chr5 100710862 100711067 -102374465 - L1ME1 LINE L1 -44 6122 5920 201 121 0 0 chr5 100761388 100761421 -102324111 + (CAT)n Simple_repeat Simple_repeat 1 33 0 425 318 65 35 chr5 100761433 100761634 -102323898 - MIR SINE MIR -21 241 35 544 318 36 20 chr5 100762068 100762263 -102323269 + MIR SINE MIR 45 242 -20 2459 87 3 0 chr5 100763251 100763560 -102321972 + AluSp SINE Alu 1 310 -3 1636 156 73 10 chr5 100763587 100763901 -102321631 - MLT1A1 LTR MaLR 0 365 32 206 311 43 56 chr5 100764214 100764375 -102321157 + L2 LINE L2 2274 2432 -882 189 0 0 0 chr5 100764554 100764575 -102320957 + (T)n Simple_repeat Simple_repeat 1 21 0 475 250 16 39 chr5 100765433 100765561 -102319971 + MER5A DNA MER1_type 9 133 -56 182 348 87 17 chr5 100765629 100765744 -102319788 + L2 LINE L2 3140 3262 -10 31 26 0 0 chr5 100766182 100766220 -102319312 + AT_rich Low_complexity Low_complexity 1 38 0 42014 38 22 2 chr5 100766391 100772418 -102313114 - L1PA2 LINE L1 -1 6154 1 227 196 0 20 chr5 100775553 100775604 -102309928 - L1MC4 LINE L1 -1340 6702 6653 631 302 215 10 chr5 100775875 100776412 -102309120 - L2 LINE L2 -4 3309 2674 1504 180 17 94 chr5 100777417 100777822 -102307710 - MLT1A2 LTR MaLR 0 374 1 190 349 0 12 chr5 100778495 100778578 -102306954 + MER5A DNA MER1_type 1 82 -107 905 192 6 6 chr5 100778580 100778747 -102306785 + FAM SINE Alu 8 174 -11 228 344 11 21 chr5 100778765 100778858 -102306674 + MER5A DNA MER1_type 98 189 0 186 133 0 0 chr5 100779029 100779059 -102306473 + (CA)n Simple_repeat Simple_repeat 1 30 0 372 255 141 20 chr5 100779190 100779594 -102305938 - L1MEd LINE L1 -2888 3241 2789 403 291 110 37 chr5 100779616 100780131 -102305401 - L1MEd LINE L1 -860 1630 990 2535 53 0 0 chr5 100780186 100780488 -102305044 - AluY SINE Alu -9 302 1 21 0 0 0 chr5 100780928 100780949 -102304583 + AT_rich Low_complexity Low_complexity 1 21 0 567 229 8 8 chr5 100781330 100781448 -102304084 - L2 LINE L2 -5 3308 3191 180 407 12 12 chr5 100782147 100782228 -102303304 + MIR3 SINE MIR 12 92 -116 329 316 146 19 chr5 100785284 100785496 -102300036 - MER102b DNA MER1_type 0 341 103 421 322 67 19 chr5 100786069 100786277 -102299255 + L2 LINE L2 2843 3060 -212 1139 228 65 39 chr5 100786293 100786703 -102298829 - MLT1C LTR MaLR -2 465 6 305 311 98 26 chr5 100786709 100786902 -102298630 + L2 LINE L2 3106 3312 -1 256 342 36 0 chr5 100786895 100787006 -102298526 + MIR3 SINE MIR 89 203 -5 * 270 246 15 15 chr5 100788340 100788405 -102297127 - L2 LINE L2 -5 3308 3244 1609 166 31 17 chr5 100788428 100788717 -102296815 + AluJb SINE Alu 1 293 -19 620 284 52 54 chr5 100788778 100789143 -102296389 - L2 LINE L2 -256 3057 2687 6472 83 31 5 chr5 100789176 100790155 -102295377 - L1PA10 LINE L1 0 6168 5206 317 158 26 0 chr5 100790156 100790232 -102295300 - L1PA10 LINE L1 -987 5159 5082 381 314 52 17 chr5 100790783 100790955 -102294577 - MIR SINE MIR -58 204 27 285 154 0 30 chr5 100791126 100791203 -102294329 + L1ME3 LINE L1 5431 5500 -674 1531 223 96 37 chr5 100791216 100791310 -102294222 + L1ME3 LINE L1 5589 5676 -486 2023 146 64 0 chr5 100791310 100791652 -102293880 - MER47A DNA MER2_type -2 364 1 1531 223 96 37 chr5 100791652 100792099 -102293433 + L1ME3 LINE L1 5676 6162 0 308 182 13 65 chr5 100792493 100792570 -102292962 - MIR3 SINE MIR -5 203 131 2198 114 0 0 chr5 100793046 100793344 -102292188 - AluSx SINE Alu -12 300 3 22 0 0 0 chr5 100794201 100794223 -102291309 + AT_rich Low_complexity Low_complexity 1 22 0 236 340 126 0 chr5 100794454 100794557 -102290975 - L2 LINE L2 -5 3308 3193 255 311 98 23 chr5 100795965 100796097 -102289435 + MIR SINE MIR 118 259 -3 1355 179 26 90 chr5 100797649 100798028 -102287504 + MLT1A1 LTR MaLR 11 365 0 186 250 0 0 chr5 100798281 100798325 -102287207 + L2 LINE L2 3229 3272 0 275 232 12 73 chr5 100799556 100799638 -102285894 + MIR SINE MIR 13 89 -173 389 330 33 16 chr5 100799926 100800108 -102285424 + MIR SINE MIR 78 262 0 321 109 54 11 chr5 100800322 100800414 -102285118 + (TA)n Simple_repeat Simple_repeat 1 96 0 475 274 66 33 chr5 100800414 100800626 -102284906 + L1ME1 LINE L1 1796 2014 -4382 * 2193 235 98 56 chr5 100800619 100800796 -102284736 + L1M4 LINE L1 3695 3863 -2283 1509 173 3 32 chr5 100800796 100801079 -102284453 + AluJb SINE Alu 38 312 0 2193 235 98 56 chr5 100801079 100801253 -102284279 + L1M4 LINE L1 3863 4028 -2118 2235 136 18 21 chr5 100801253 100801642 -102283890 - MLT1B LTR MaLR -2 388 1 2193 235 98 56 chr5 100801642 100802493 -102283039 + L1M4 LINE L1 4028 4949 -1197 1197 160 5 0 chr5 100802656 100802850 -102282682 - MLT1B LTR MaLR -195 195 1 2339 235 82 33 chr5 100802850 100803727 -102281805 + L1ME1 LINE L1 4102 5021 -1194 672 244 63 60 chr5 100803713 100803832 -102281700 + L1ME1 LINE L1 5914 6031 -204 * 2561 53 3 0 chr5 100803832 100804133 -102281399 + AluY SINE Alu 3 304 -7 672 244 63 60 chr5 100804133 100804329 -102281203 + L1ME1 LINE L1 6031 6230 -5 29 84 0 0 chr5 100804484 100804555 -102280977 + AT_rich Low_complexity Low_complexity 1 71 0 2142 80 42 0 chr5 100805191 100805480 -102280052 + AluY SINE Alu 1 301 -10 204 300 35 88 chr5 100805995 100806165 -102279367 + MIR SINE MIR 7 167 -95 191 250 0 0 chr5 100807261 100807305 -102278227 + L2 LINE L2 3262 3305 -8 243 350 70 0 chr5 100807629 100807729 -102277803 - MIR3 SINE MIR -14 194 88 28 0 0 0 chr5 100807890 100807918 -102277614 + AT_rich Low_complexity Low_complexity 1 28 0 291 274 14 0 chr5 100808303 100808376 -102277156 - L2 LINE L2 0 3272 3199 805 267 39 55 chr5 100808562 100808873 -102276659 - L2 LINE L2 -2 3311 3006 905 318 148 6 chr5 100809668 100810246 -102275286 - L2 LINE L2 -388 2926 2223 2069 101 7 3 chr5 100810246 100810532 -102275000 + AluSq SINE Alu 27 313 0 905 318 148 6 chr5 100810532 100810677 -102274855 - L2 LINE L2 -1091 2223 2100 429 271 70 0 chr5 100811158 100811287 -102274245 + MIR SINE MIR 48 185 -77 968 317 164 27 chr5 100811507 100812367 -102273165 + L3 LINE CR1 577 1554 -23 448 333 12 19 chr5 100813075 100813237 -102272295 + MIR SINE MIR 92 252 -10 41862 59 5 1 chr5 100813711 100819838 -102265694 + L1PA5 LINE L1 2 6154 0 24 0 0 0 chr5 100820135 100820159 -102265373 + AT_rich Low_complexity Low_complexity 1 24 0 547 211 7 7 chr5 100820188 100820335 -102265197 + (TA)n Simple_repeat Simple_repeat 2 148 0 2258 68 4 0 chr5 100821988 100822296 -102263236 + AluY SINE Alu 3 311 0 1538 145 25 0 chr5 100822427 100822703 -102262829 + L1MA3 LINE L1 6023 6305 0 22 0 0 0 chr5 100822712 100822734 -102262798 + AT_rich Low_complexity Low_complexity 1 22 0 1861 163 3 7 chr5 100823135 100823441 -102262091 - AluJb SINE Alu -7 305 1 221 343 29 20 chr5 100823739 100823841 -102261691 - MIR SINE MIR -60 148 46 294 295 49 0 chr5 100824297 100824419 -102261113 - MARNA DNA Mariner -144 442 315 492 221 17 8 chr5 100824826 100824947 -102260585 + MER6A DNA MER2_type -26 96 -509 1696 128 165 88 chr5 100824950 100825325 -102260207 - MER4A LTR ERV1 0 664 261 614 112 10 10 chr5 100825325 100825423 -102260109 - MER4A LTR ERV1 -566 98 1 3182 152 10 17 chr5 100825423 100825943 -102259589 + MER6A DNA MER2_type 96 351 -254 878 131 0 0 chr5 100825947 100826069 -102259463 + FRAM SINE Alu 35 156 -20 1468 163 0 0 chr5 100826077 100826335 -102259197 + MER6A DNA MER2_type 348 605 0 28 0 0 0 chr5 100827088 100827116 -102258416 + AT_rich Low_complexity Low_complexity 1 28 0 302 237 302 7 chr5 100828009 100828148 -102257384 - MIR SINE MIR -11 251 72 329 338 44 7 chr5 100828571 100828707 -102256825 + L2 LINE L2 3172 3312 -1 277 200 233 58 chr5 100828781 100828901 -102256631 + L2 LINE L2 3155 3295 -18 334 134 30 0 chr5 100830031 100830098 -102255434 + (TA)n Simple_repeat Simple_repeat 2 70 0 211 216 20 0 chr5 100830517 100830568 -102254964 + (CA)n Simple_repeat Simple_repeat 2 53 0 2108 103 31 3 chr5 100831168 100831460 -102254072 + AluSc SINE Alu 1 300 -9 296 308 135 43 chr5 100832406 100832591 -102252941 + L2 LINE L2 2110 2311 -1003 2548 26 7 0 chr5 100832610 100832917 -102252615 - L1PA4 LINE L1 0 6155 5847 2337 93 0 3 chr5 100833337 100833639 -102251893 - AluSp SINE Alu -12 301 1 1162 156 0 0 chr5 100833997 100834177 -102251355 - MER1B DNA MER1_type -116 181 2 744 163 47 16 chr5 100834968 100835097 -102250435 - FLAM_C SINE Alu -10 133 1 381 338 233 3 chr5 100836004 100836365 -102249167 - L3 LINE CR1 -24 1553 1110 1365 212 70 19 chr5 100836367 100836660 -102248872 - L1MC4a LINE L1 0 7808 7486 2235 101 7 0 chr5 100836660 100836956 -102248576 - AluSg SINE Alu -6 304 7 1365 212 70 19 chr5 100836956 100837077 -102248455 - L1MC4a LINE L1 -322 7486 7373 472 176 76 34 chr5 100837047 100837166 -102248366 - L1M4 LINE L1 -448 5736 5613 * 4701 218 62 44 chr5 100837203 100837556 -102247976 - L1M4 LINE L1 -4833 1709 1364 2207 122 0 16 chr5 100837556 100837868 -102247664 - AluSq SINE Alu -6 307 1 4701 218 62 44 chr5 100837868 100838826 -102246706 - L1M4 LINE L1 -5178 1364 374 725 149 18 0 chr5 100838951 100839065 -102246467 + MSTA LTR MaLR 313 428 0 9549 138 9 28 chr5 100839067 100840674 -102244858 + MSTA-int LTR MaLR 3 1578 -2 2360 136 80 5 chr5 100840676 100841074 -102244458 + MSTA LTR MaLR 1 428 0 673 277 29 25 chr5 100841188 100841430 -102244102 + MIR SINE MIR 8 250 -12 281 232 0 4 chr5 100841761 100841840 -102243692 - MLT1A2 LTR MaLR 0 374 313 447 324 53 32 chr5 100842017 100842393 -102243139 - L1ME LINE L1 -346 5775 5394 222 227 167 0 chr5 100842403 100842469 -102243063 - MIR SINE MIR -23 239 163 480 232 174 27 chr5 100843505 100843872 -102241660 - L1ME4a LINE L1 -3 6118 5698 296 285 85 0 chr5 100843898 100844028 -102241504 - L1ME4a LINE L1 -474 5647 5507 338 102 0 0 chr5 100844091 100844140 -102241392 + MADE1 DNA Mariner 1 49 -31 1280 195 40 94 chr5 100844140 100844168 -102241364 - MLT2D LTR ERVL -15 399 371 369 0 0 0 chr5 100844168 100844209 -102241323 + (TG)n Simple_repeat Simple_repeat 2 42 0 1280 195 40 94 chr5 100844209 100844554 -102240978 - MLT2D LTR ERVL -43 371 46 1814 173 10 0 chr5 100844582 100844877 -102240655 - AluJo SINE Alu -14 298 1 238 33 0 0 chr5 100844924 100844954 -102240578 - MLT2D LTR ERVL -490 30 1 316 243 57 73 chr5 100845208 100845385 -102240147 - HAL1b LINE L1 -1103 245 72 22 35 0 0 chr5 100847829 100847858 -102237674 + AT_rich Low_complexity Low_complexity 1 29 0 267 280 191 19 chr5 100848064 100848221 -102237311 + L3 LINE CR1 406 589 -988 195 286 95 0 chr5 100848434 100848497 -102237035 + L3 LINE CR1 1508 1576 -1 1214 97 11 29 chr5 100848883 100849058 -102236474 - AluSg/x SINE Alu -59 251 80 283 373 104 23 chr5 100849078 100849521 -102236011 + L2 LINE L2 2376 2854 -460 1301 248 131 3 chr5 100849750 100850315 -102235217 - MER69B DNA AcHobo 0 1226 539 1507 262 104 2 chr5 100850341 100850773 -102234759 - MER69B DNA AcHobo -750 476 1 1780 218 64 10 chr5 100851692 100851996 -102233536 + MER63B DNA MER1_type 1 334 -728 1935 155 10 0 chr5 100851996 100852299 -102233233 - AluSx SINE Alu -6 306 1 1780 218 64 10 chr5 100852299 100852402 -102233130 + MER63B DNA MER1_type 334 430 -6 23 33 0 0 chr5 100854277 100854307 -102231225 + AT_rich Low_complexity Low_complexity 1 30 0 224 321 83 0 chr5 100857411 100857495 -102228037 - L2 LINE L2 -35 3237 3147 5815 100 12 0 chr5 100857550 100858939 -102226593 - L1PA14 LINE L1 -3 6158 4743 351 0 0 0 chr5 100858959 100858998 -102226534 + (CA)n Simple_repeat Simple_repeat 1 39 0 8753 208 21 12 chr5 100859034 100860993 -102224539 - L1PA14 LINE L1 -2329 3817 1841 366 266 0 0 chr5 100861574 100861653 -102223879 - L2 LINE L2 -1 3312 3234 353 336 24 0 chr5 100862574 100862699 -102222833 - MER5B DNA MER1_type -47 131 4 789 311 117 52 chr5 100863591 100864096 -102221436 - MLT1K LTR MaLR -24 564 27 403 305 129 26 chr5 100865228 100865410 -102220122 - MIR SINE MIR -50 212 8 536 258 31 31 chr5 100868777 100868940 -102216592 + MER5B DNA MER1_type 8 170 -8 22 35 0 0 chr5 100869455 100869484 -102216048 + AT_rich Low_complexity Low_complexity 1 29 0 473 260 75 34 chr5 100870850 100870996 -102214536 - MIR SINE MIR -105 157 6 2063 129 0 0 chr5 100871683 100871963 -102213569 + AluSx SINE Alu 6 285 -27 522 0 0 0 chr5 100871963 100872021 -102213511 + (CA)n Simple_repeat Simple_repeat 2 59 0 219 69 0 0 chr5 100872854 100872883 -102212649 + (T)n Simple_repeat Simple_repeat 1 29 0 1411 202 26 23 chr5 100873563 100873870 -102211662 - AluJo SINE Alu -4 308 1 226 67 0 0 chr5 100874025 100874055 -102211477 + Alu SINE Alu 259 288 -11 533 264 99 28 chr5 100874182 100874466 -102211066 - L1ME LINE L1 -370 5775 5472 522 275 166 12 chr5 100874496 100874991 -102210541 - L1ME LINE L1 -824 5305 4735 466 285 201 35 chr5 100874991 100875423 -102210109 - L1ME LINE L1 -2256 3873 3370 1146 247 206 48 chr5 100876617 100877274 -102208258 - L2 LINE L2 -1 3312 2561 25 0 0 0 chr5 100877414 100877439 -102208093 + AT_rich Low_complexity Low_complexity 1 25 0 228 245 130 56 chr5 100877529 100877745 -102207787 - L1ME LINE L1 -3600 2529 2298 321 301 104 5 chr5 100877796 100877989 -102207543 - L1ME LINE L1 -3897 2234 2023 236 344 10 10 chr5 100878214 100878310 -102207222 - L1ME LINE L1 -5549 570 475 332 299 114 49 chr5 100878339 100878707 -102206825 - L1ME LINE L1 -5710 409 18 1180 182 119 4 chr5 100879660 100879896 -102205636 - AluJo SINE Alu -47 265 3 717 206 141 11 chr5 100880520 100880620 -102204912 + MIR SINE MIR 44 130 -132 195 42 0 0 chr5 100880620 100880644 -102204888 + (TAA)n Simple_repeat Simple_repeat 2 25 0 717 206 141 11 chr5 100880644 100880684 -102204848 + MIR SINE MIR 130 163 -99 495 14 42 0 chr5 100880684 100880756 -102204776 + (TA)n Simple_repeat Simple_repeat 2 76 0 717 206 141 11 chr5 100880756 100880798 -102204734 + MIR SINE MIR 163 251 -11 1400 168 103 8 chr5 100881089 100881200 -102204332 + AluJo SINE Alu 1 100 -212 2160 36 0 12 chr5 100881200 100881450 -102204082 + AluY SINE Alu 51 297 -14 1400 168 103 8 chr5 100881450 100881600 -102203932 + AluJo SINE Alu 100 287 -25 26 0 0 0 chr5 100881745 100881771 -102203761 + AT_rich Low_complexity Low_complexity 1 26 0 1983 239 46 14 chr5 100881805 100882306 -102203226 - LTR40a LTR ERVL 0 519 3 232 307 22 153 chr5 100882432 100882660 -102202872 - L2 LINE L2 -77 3195 2998 1965 136 45 6 chr5 100882660 100882991 -102202541 + MER46B DNA MER2_type 2 220 -16 683 333 71 23 chr5 100883002 100883505 -102202027 - L2 LINE L2 -272 3000 2415 467 271 229 45 chr5 100884024 100884378 -102201154 - MLT1K LTR MaLR -25 563 145 230 326 92 109 chr5 100884827 100885284 -102200248 + L3b LINE CR1 1102 1550 -33 4973 36 16 0 chr5 100885895 100886508 -102199024 + L1PA7 LINE L1 5530 6152 -2 811 40 0 0 chr5 100887392 100887493 -102198039 - L1PA7 LINE L1 -3 6151 6051 1929 102 19 0 chr5 100887909 100888173 -102197359 + AluSp SINE Alu 32 300 -13 5043 50 12 2 chr5 100888698 100889337 -102196195 + L1PA7 LINE L1 5509 6154 0 811 40 0 0 chr5 100890229 100890330 -102195202 - L1PA7 LINE L1 -3 6151 6051 647 291 207 18 chr5 100891116 100891158 -102194374 + L2 LINE L2 2860 2893 -420 958 224 19 23 chr5 100891158 100891417 -102194115 + MIR SINE MIR 2 259 -3 647 291 207 18 chr5 100891417 100891755 -102193777 + L2 LINE L2 2893 3312 -1 915 101 8 0 chr5 100892311 100892430 -102193102 - AluSq/x SINE Alu -192 120 1 628 196 88 0 chr5 100892571 100892719 -102192813 - MLT1A1 LTR MaLR 0 365 205 1852 88 25 14 chr5 100892724 100893007 -102192525 - AluSp SINE Alu -11 302 17 218 243 37 9 chr5 100893888 100893995 -102191537 + (CACAA)n Simple_repeat Simple_repeat 3 112 0 299 206 19 45 chr5 100894387 100894542 -102190990 + (CACAA)n Simple_repeat Simple_repeat 4 154 0 284 214 57 25 chr5 100894732 100894891 -102190641 + A-rich Low_complexity Low_complexity 3 166 0 * 376 226 24 24 chr5 100894791 100894959 -102190573 + (CACAA)n Simple_repeat Simple_repeat 2 169 0 201 228 48 48 chr5 100895494 100895661 -102189871 + (CAGAA)n Simple_repeat Simple_repeat 3 169 0 * 243 209 46 26 chr5 100895649 100895802 -102189730 + (CACAA)n Simple_repeat Simple_repeat 2 157 0 268 259 17 35 chr5 100895892 100896066 -102189466 + (CAAA)n Simple_repeat Simple_repeat 3 173 0 295 254 12 41 chr5 100896259 100896428 -102189104 + A-rich Low_complexity Low_complexity 4 167 0 881 163 64 17 chr5 100900090 100900262 -102185270 - AluSg/x SINE Alu -27 285 106 1815 205 30 4 chr5 100900262 100900754 -102184778 - L1P LINE L1 -839 5307 4803 21 36 0 0 chr5 100900843 100900871 -102184661 + AT_rich Low_complexity Low_complexity 1 28 0 375 275 98 29 chr5 100902656 100902900 -102182632 + L1ME LINE L1 5532 5792 -378 1226 191 43 37 chr5 100903211 100903510 -102182022 + AluJo SINE Alu 4 304 -8 249 151 0 75 chr5 100904347 100904400 -102181132 + MIR SINE MIR 110 158 -104 599 275 239 31 chr5 100905495 100905822 -102179710 + L2 LINE L2 2918 3312 -1 198 327 106 44 chr5 100906523 100906636 -102178896 - L2 LINE L2 -20 3293 3174 1165 189 36 3 chr5 100906842 100907143 -102178389 + L1 LINE L1 3545 3855 -2291 181 308 48 58 chr5 100907590 100907694 -102177838 - L2 LINE L2 -236 3036 2934 7802 182 19 6 chr5 100907707 100909720 -102175812 + L1P5 LINE L1 3545 5586 -565 186 354 101 13 chr5 100909733 100909812 -102175720 + MIR SINE MIR 21 106 -102 3195 89 18 13 chr5 100909882 100910333 -102175199 - MLT2A2 LTR ERVL 0 453 1 231 125 0 0 chr5 100911251 100911291 -102174241 + (TTTC)n Simple_repeat Simple_repeat 2 41 0 466 230 0 10 chr5 100912428 100912528 -102173004 - MER8 DNA MER2_type -140 99 1 1512 176 8 8 chr5 100913224 100913480 -102172052 + AluJo SINE Alu 38 293 -19 452 218 0 45 chr5 100913514 100913624 -102171908 + L2 LINE L2 3187 3291 -22 1749 152 18 21 chr5 100913850 100914150 -102171382 + MER47A DNA MER2_type 1 301 -2022 1877 80 0 4 chr5 100914150 100914389 -102171143 - AluY SINE Alu -3 308 71 1749 152 18 21 chr5 100914389 100914418 -102171114 + MER47A DNA MER2_type 301 329 -37 2134 106 10 10 chr5 100915046 100915347 -102170185 - AluSx SINE Alu -11 301 1 385 270 63 16 chr5 100916420 100916546 -102168986 + L2 LINE L2 3141 3272 0 345 24 0 0 chr5 100916675 100916717 -102168815 + (TG)n Simple_repeat Simple_repeat 1 42 0 288 0 0 0 chr5 100916716 100916748 -102168784 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 1771 177 54 11 chr5 100917084 100917434 -102168098 - MLT1A1 LTR MaLR 0 365 1 180 0 0 0 chr5 100917863 100917883 -102167649 + (TA)n Simple_repeat Simple_repeat 2 21 0 658 318 33 12 chr5 100918011 100918256 -102167276 - MIR SINE MIR 0 262 13 9105 79 31 10 chr5 100918424 100919683 -102165849 - HSMAR1 DNA Mariner -2 1285 1 182 217 117 0 chr5 100920808 100920868 -102164664 + L3 LINE CR1 1504 1570 -7 595 320 16 53 chr5 100921728 100921975 -102163557 - MIR SINE MIR -14 248 11 1217 140 112 121 chr5 100922806 100923120 -102162412 - AluJb SINE Alu -1 311 1 209 300 0 0 chr5 100924720 100924770 -102160762 + CT-rich Low_complexity Low_complexity 3 52 0 4571 55 3 3 chr5 100928144 100928723 -102156809 + L1PA6 LINE L1 5570 6148 -6 210 352 102 48 chr5 100929069 100929626 -102155906 + L2 LINE L2 1487 2073 -1241 220 360 20 10 chr5 100929690 100929790 -102155742 + L2 LINE L2 2221 2321 -993 327 266 65 72 chr5 100929980 100930119 -102155413 + MER5B DNA MER1_type 2 139 -39 1413 115 0 24 chr5 100930940 100931148 -102154384 - AluSx SINE Alu -75 237 35 767 208 94 30 chr5 100931275 100931477 -102154055 - MIR SINE MIR -39 223 9 24 0 0 0 chr5 100932804 100932828 -102152704 + AT_rich Low_complexity Low_complexity 1 24 0 245 183 17 0 chr5 100934445 100934505 -102151027 + (ATAGG)n Simple_repeat Simple_repeat 5 65 0 264 148 115 0 chr5 100934557 100934618 -102150914 - MER112 DNA MER1_type -189 71 4 2100 133 3 3 chr5 100935356 100935656 -102149876 - AluJb SINE Alu -7 305 6 3094 117 22 0 chr5 100935679 100936176 -102149356 + MER75 DNA T2_type 1 508 -6 336 83 0 0 chr5 100936247 100936295 -102149237 + (TGG)n Simple_repeat Simple_repeat 1 48 0 198 103 0 0 chr5 100936875 100936904 -102148628 + (TAG)n Simple_repeat Simple_repeat 1 29 0 2376 83 7 0 chr5 100939540 100939840 -102145692 - AluSp SINE Alu -11 302 1 2150 104 0 42 chr5 100940570 100940879 -102144653 + AluY SINE Alu 1 296 -15 25 31 0 0 chr5 100940898 100940930 -102144602 + AT_rich Low_complexity Low_complexity 1 32 0 5057 171 37 24 chr5 100940937 100942676 -102142856 + L1PA16 LINE L1 4396 6164 -2 242 259 0 17 chr5 100943502 100943560 -102141972 + GA-rich Low_complexity Low_complexity 1 57 0 264 297 61 94 chr5 100943970 100944049 -102141483 - MIR SINE MIR -48 214 134 2186 120 0 13 chr5 100944049 100944365 -102141167 - AluSx SINE Alu 0 312 1 264 297 61 94 chr5 100944365 100944497 -102141035 - MIR SINE MIR -128 134 10 1913 172 0 0 chr5 100946090 100946387 -102139145 - AluSx SINE Alu -15 297 1 21 36 0 0 chr5 100946520 100946548 -102138984 + AT_rich Low_complexity Low_complexity 1 28 0 5364 117 11 30 chr5 100946553 100947610 -102137922 - L1PA15 LINE L1 -2 6163 5137 276 338 126 40 chr5 100948065 100948263 -102137269 + L2 LINE L2 2606 2820 -494 480 302 32 0 chr5 100948783 100948909 -102136623 + L2 LINE L2 3143 3272 0 1052 45 0 0 chr5 100949260 100949393 -102136139 - L1PA6 LINE L1 0 6154 6022 33 25 0 0 chr5 100950593 100950633 -102134899 + AT_rich Low_complexity Low_complexity 1 40 0 466 275 126 33 chr5 100950850 100951191 -102134341 + MLT1H LTR MaLR 32 395 -195 245 253 105 11 chr5 100951219 100951314 -102134218 + MLT1H LTR MaLR 492 595 0 246 271 70 136 chr5 100952405 100952473 -102133059 - MIR SINE MIR -26 236 165 1386 94 14 0 chr5 100952473 100952685 -102132847 - L1MA4A LINE L1 -16 6287 6073 246 271 70 136 chr5 100952685 100952815 -102132717 - MIR SINE MIR -97 165 51 207 0 0 0 chr5 100952999 100953022 -102132510 + (A)n Simple_repeat Simple_repeat 1 23 0 374 279 29 15 chr5 100953127 100953263 -102132269 + MIR SINE MIR 118 255 -7 1254 174 128 18 chr5 100953403 100953730 -102131802 - MLT1A2 LTR MaLR -11 363 1 2142 106 13 16 chr5 100953906 100954218 -102131314 + AluSq SINE Alu 1 311 -2 24 0 0 0 chr5 100954695 100954719 -102130813 + AT_rich Low_complexity Low_complexity 1 24 0 982 210 0 6 chr5 100954733 100954914 -102130618 - AluJo SINE Alu -20 292 113 1622 196 68 28 chr5 100955979 100956375 -102129157 - MLT2B1 LTR ERVL -98 456 1 200 221 87 134 chr5 100956375 100956471 -102129061 - L2 LINE L2 -151 3162 3074 2203 104 7 0 chr5 100956471 100956759 -102128773 - AluSx SINE Alu -22 290 1 200 221 87 134 chr5 100956759 100956811 -102128721 - L2 LINE L2 -239 3074 3021 326 289 41 10 chr5 100957303 100957400 -102128132 + L2 LINE L2 3125 3224 -48 265 312 29 58 chr5 100957481 100957619 -102127913 - MIR SINE MIR -107 155 22 343 331 117 7 chr5 100957842 100957996 -102127536 - L2 LINE L2 0 3272 3102 2214 110 3 0 chr5 100958208 100958507 -102127025 - AluSx SINE Alu -12 300 1 454 117 13 13 chr5 100958532 100958609 -102126923 + AluS SINE Alu 1 77 -233 1406 144 10 0 chr5 100959481 100959689 -102125843 - AluJb SINE Alu -17 295 86 1729 129 89 11 chr5 100960054 100960334 -102125198 - AluSq SINE Alu -11 302 1 4475 157 35 16 chr5 100960976 100961337 -102124195 - L1MB4 LINE L1 -6 6174 5821 2066 172 17 3 chr5 100961337 100961697 -102123835 - MLT1A1 LTR MaLR 0 365 1 4475 157 35 16 chr5 100961697 100962223 -102123309 - L1MB4 LINE L1 -359 5821 5270 748 181 78 12 chr5 100962633 100962799 -102122733 + MER69A DNA AcHobo 1 177 0 33 73 0 0 chr5 100963303 100963371 -102122161 + AT_rich Low_complexity Low_complexity 1 68 0 209 351 14 0 chr5 100963564 100963638 -102121894 + CT-rich Low_complexity Low_complexity 1 75 0 582 119 0 0 chr5 100963897 100963981 -102121551 + AluS SINE Alu 1 84 -229 1295 215 222 0 chr5 100963981 100964413 -102121119 + L1MC4 LINE L1 6489 7016 -1026 1633 191 0 37 chr5 100964413 100964737 -102120795 + AluJb SINE Alu 1 312 0 326 91 18 0 chr5 100964748 100964803 -102120729 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 1614 221 111 16 chr5 100964890 100965468 -102120064 + L1MC4 LINE L1 7244 7876 -166 264 167 0 0 chr5 100966044 100966092 -102119440 + (CA)n Simple_repeat Simple_repeat 2 49 0 184 255 78 0 chr5 100967756 100967807 -102117725 + L2 LINE L2 3164 3218 -54 366 158 68 103 chr5 100967821 100967967 -102117565 + Charlie8 DNA MER1_type 4 144 -2273 5749 126 41 81 chr5 100968563 100969022 -102116510 - L1MA5A LINE L1 0 6297 5821 503 117 13 0 chr5 100969022 100969099 -102116433 - MADE1 DNA Mariner 0 80 3 1919 148 47 0 chr5 100969109 100969286 -102116246 - AluJb SINE Alu 0 312 114 207 0 0 0 chr5 100969286 100969309 -102116223 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1919 148 47 0 chr5 100969309 100969429 -102116103 - AluJb SINE Alu -198 114 1 5749 126 41 81 chr5 100969429 100970853 -102114679 - L1MA5A LINE L1 -485 5812 4522 298 314 70 38 chr5 100971065 100971250 -102114282 - L2 LINE L2 -1192 2122 1932 993 196 11 0 chr5 100971268 100971447 -102114085 - MER5A DNA MER1_type -2 187 7 365 0 22 0 chr5 100971668 100971713 -102113819 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 230 189 122 0 chr5 100972109 100972183 -102113349 - AluSp SINE Alu -103 200 118 323 283 147 25 chr5 100972854 100973168 -102112364 - MLT1K LTR MaLR -235 353 2 196 314 29 0 chr5 100973288 100973358 -102112174 - L3 LINE CR1 -1062 515 444 211 309 12 0 chr5 100974467 100974548 -102110984 + CT-rich Low_complexity Low_complexity 1 82 0 189 240 60 0 chr5 100976737 100976787 -102108745 + L2 LINE L2 3017 3069 -244 2220 123 0 3 chr5 100976878 100977179 -102108353 + AluSx SINE Alu 1 300 -12 2111 119 0 7 chr5 100977180 100977466 -102108066 + AluSg SINE Alu 2 285 -25 2008 115 24 0 chr5 100977487 100977774 -102107758 + AluSx SINE Alu 1 294 -18 225 94 0 0 chr5 100977774 100977806 -102107726 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 181 177 0 32 chr5 100978368 100978430 -102107102 + T-rich Low_complexity Low_complexity 6 65 0 2015 139 0 0 chr5 100978902 100979210 -102106322 + AluSx SINE Alu 1 308 0 180 333 17 0 chr5 100979533 100979593 -102105939 + MIR SINE MIR 55 115 -147 21 0 0 0 chr5 100980609 100980630 -102104902 + AT_rich Low_complexity Low_complexity 1 21 0 399 225 202 39 chr5 100980633 100980811 -102104721 - MIR SINE MIR 0 262 56 530 277 35 55 chr5 100981020 100981222 -102104310 + MIR SINE MIR 65 262 0 723 246 53 22 chr5 100983435 100983663 -102101869 - Charlie8 DNA MER1_type -2182 235 1 2147 138 0 0 chr5 100984118 100984422 -102101110 + AluSx SINE Alu 1 304 -8 1017 243 43 4 chr5 100986244 100986479 -102099053 + MIR SINE MIR 18 261 -1 1515 133 66 37 chr5 100986489 100986842 -102098690 - MLT1A1 LTR MaLR 0 365 1 251 215 100 161 chr5 100987045 100987305 -102098227 - L2 LINE L2 -75 3238 2995 309 218 26 26 chr5 100988810 100988888 -102096644 + MIR SINE MIR 185 262 0 1376 184 38 3 chr5 100991274 100991562 -102093970 + AluJo SINE Alu 6 303 -9 268 143 102 0 chr5 100992260 100992309 -102093223 + Tigger5 DNA MER2_type 2 55 -2268 446 186 12 0 chr5 100992319 100992405 -102093127 + Tigger5 DNA MER2_type 2237 2323 0 279 239 221 18 chr5 100992418 100992531 -102093001 + L2 LINE L2 3137 3272 0 260 254 187 52 chr5 100993731 100993865 -102091667 - MIR3 SINE MIR -7 201 50 2310 92 34 0 chr5 100994251 100994545 -102090987 + AluSq SINE Alu 1 304 -9 4128 159 39 2 chr5 100994628 100995420 -102090112 - L1PA16 LINE L1 -8 6158 5338 1041 132 47 71 chr5 100995428 100995640 -102089892 - AluSg/x SINE Alu 0 310 104 2121 200 14 4 chr5 100995643 100996147 -102089385 - L1PA16 LINE L1 -838 5308 4800 22 35 0 0 chr5 100996234 100996263 -102089269 + AT_rich Low_complexity Low_complexity 1 29 0 280 308 101 85 chr5 100996405 100997103 -102088429 - L2 LINE L2 0 3313 2601 419 63 0 0 chr5 100997103 100997166 -102088366 - L1PA15 LINE L1 0 6165 6103 280 308 101 85 chr5 100997166 100997335 -102088197 - L2 LINE L2 -712 2601 2436 244 289 141 22 chr5 100997544 100997679 -102087853 + MIR SINE MIR 90 240 -22 1733 173 6 26 chr5 100998181 100998493 -102087039 - AluJb SINE Alu -6 306 1 26 30 0 0 chr5 100998611 100998644 -102086888 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr5 100999033 100999061 -102086471 + AT_rich Low_complexity Low_complexity 1 28 0 1925 110 11 0 chr5 100999068 100999331 -102086201 + AluSx SINE Alu 39 304 -8 219 333 0 0 chr5 100999807 100999867 -102085665 - L2 LINE L2 0 3313 3254 212 248 50 147 chr5 101000084 101000342 -102085190 - L2 LINE L2 -339 2975 2743 269 356 25 25 chr5 101000782 101000945 -102084587 - MIR SINE MIR -83 179 17 219 188 0 0 chr5 101001238 101001286 -102084246 + T-rich Low_complexity Low_complexity 1 48 0 551 172 0 0 chr5 101001290 101001377 -102084155 - AluJ/FLAM SINE Alu -225 87 1 221 271 93 37 chr5 101001893 101002000 -102083532 + L2 LINE L2 3200 3312 -1 296 194 67 127 chr5 101002138 101002272 -102083260 + MER94 DNA DNA 9 134 0 2248 105 3 0 chr5 101002897 101003191 -102082341 - AluSx SINE Alu -13 299 5 21 36 0 0 chr5 101004672 101004700 -102080832 + AT_rich Low_complexity Low_complexity 1 28 0 340 350 58 12 chr5 101004997 101005237 -102080295 + L3b LINE CR1 1136 1386 -197 270 311 38 61 chr5 101006327 101006459 -102079073 - L2 LINE L2 0 3313 3185 1479 181 112 3 chr5 101006946 101007277 -102078255 - MER52A LTR ERV1 0 1755 1389 794 137 14 14 chr5 101057277 101057416 -102028116 + MLT1D LTR MaLR 367 505 0 311 310 53 9 chr5 101059816 101059929 -102025603 + MIR SINE MIR 127 244 -18 189 171 0 0 chr5 101060198 101060233 -102025299 + (TA)n Simple_repeat Simple_repeat 1 35 0 502 288 71 42 chr5 101060425 101060665 -102024867 - MIR SINE MIR -2 260 14 24 32 0 0 chr5 101062124 101062155 -102023377 + GC_rich Low_complexity Low_complexity 1 31 0 1109 188 19 10 chr5 101062636 101062843 -102022689 + AluJo SINE Alu 89 297 -15 368 312 87 17 chr5 101063095 101063268 -102022264 - MIR SINE MIR -66 196 12 478 299 39 0 chr5 101063645 101063799 -102021733 - MIR SINE MIR 0 262 103 690 305 24 0 chr5 101063806 101064019 -102021513 - MIR SINE MIR -33 229 12 1847 148 0 49 chr5 101064306 101064630 -102020902 - AluJo SINE Alu -4 308 1 2283 106 7 0 chr5 101064641 101064934 -102020598 - AluSx SINE Alu -17 295 1 279 287 48 104 chr5 101064956 101065207 -102020325 - L2 LINE L2 -5 3267 3031 1205 135 6 0 chr5 101065522 101065685 -102019847 - AluSx SINE Alu -148 164 1 570 265 75 67 chr5 101065690 101066049 -102019483 - L1ME4a LINE L1 -234 5887 5526 283 269 0 0 chr5 101066346 101066413 -102019119 - L2 LINE L2 0 3313 3247 2430 113 0 0 chr5 101067242 101067553 -102017979 + AluSx SINE Alu 1 311 -1 2071 135 3 0 chr5 101067621 101067909 -102017623 + AluSx SINE Alu 7 295 -17 2033 137 3 25 chr5 101067911 101068225 -102017307 + AluSx SINE Alu 1 307 -5 394 107 0 0 chr5 101068225 101068281 -102017251 + L1MA6 LINE L1 6110 6165 -135 432 133 0 0 chr5 101068381 101068441 -102017091 - AluJ/FLAM SINE Alu -251 61 2 183 283 0 0 chr5 101068525 101068585 -102016947 + CT-rich Low_complexity Low_complexity 1 60 0 1795 161 10 3 chr5 101068588 101068880 -102016652 - AluSx SINE Alu -18 294 1 1985 145 10 0 chr5 101069150 101069439 -102016093 + AluSx SINE Alu 1 292 -20 2294 101 3 3 chr5 101069443 101069749 -102015783 + AluSx SINE Alu 1 306 -6 255 300 138 42 chr5 101070544 101070784 -102014748 - L2 LINE L2 -1973 1341 1079 207 167 0 0 chr5 101071055 101071097 -102014435 + (CA)n Simple_repeat Simple_repeat 2 43 0 299 283 47 0 chr5 101071510 101071616 -102013916 - MIR SINE MIR -65 143 33 258 302 48 24 chr5 101072060 101072186 -102013346 - MIR SINE MIR -51 211 83 1406 149 5 9 chr5 101072266 101072488 -102013044 - AluJo SINE Alu -15 297 77 1511 122 9 0 chr5 101072588 101072844 -102012688 + L1PB2 LINE L1 5918 6175 0 31 0 0 0 chr5 101072851 101072882 -102012650 + AT_rich Low_complexity Low_complexity 1 31 0 299 146 18 0 chr5 101073002 101073057 -102012475 + HY1 scRNA scRNA 56 111 -1 34 18 0 36 chr5 101073057 101073077 -102012455 + AT_rich Low_complexity Low_complexity 1 20 -34 1681 141 91 0 chr5 101073077 101073340 -102012192 + AluSx SINE Alu 1 287 -25 34 18 0 36 chr5 101073340 101073375 -102012157 + AT_rich Low_complexity Low_complexity 20 54 0 196 200 0 0 chr5 101073404 101073444 -102012088 + L2 LINE L2 3264 3303 -10 618 49 0 0 chr5 101073446 101073528 -102012004 + (CA)n Simple_repeat Simple_repeat 1 82 0 1886 118 0 57 chr5 101073605 101073901 -102011631 - AluSp SINE Alu -3 310 32 827 152 0 55 chr5 101074017 101074181 -102011351 - MER21A LTR ERV1 -776 155 1 24 0 0 0 chr5 101074231 101074255 -102011277 + AT_rich Low_complexity Low_complexity 1 24 0 659 284 220 13 chr5 101074261 101074541 -102010991 - HAL1 LINE L1 -542 1965 1744 2153 90 10 32 chr5 101074541 101074890 -102010642 - AluSp SINE Alu 0 313 1 659 284 220 13 chr5 101074890 101075059 -102010473 - HAL1 LINE L1 -763 1744 1423 827 180 0 0 chr5 101075065 101075193 -102010339 - FLAM_C SINE Alu -1 132 5 521 60 0 0 chr5 101075219 101075286 -102010246 - MER41B LTR ERV1 -88 547 481 276 30 0 0 chr5 101075726 101075759 -102009773 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 226 236 0 14 chr5 101076821 101076836 -102008696 - L1MA10 LINE L1 -4 6330 6316 1836 221 61 26 chr5 101076836 101077445 -102008087 - L1ME1 LINE L1 -10 6156 5401 2576 221 44 37 chr5 101077466 101078032 -102007500 - L1ME1 LINE L1 -1716 4430 3854 2181 128 7 0 chr5 101078032 101078329 -102007203 - AluSx SINE Alu -13 299 1 2576 221 44 37 chr5 101078329 101078623 -102006909 - L1ME1 LINE L1 -2292 3854 3564 986 185 0 0 chr5 101078728 101078909 -102006623 + AluJb SINE Alu 128 308 0 1868 118 68 11 chr5 101079127 101079407 -102006125 - AluSx SINE Alu -16 296 1 449 141 0 0 chr5 101080156 101080227 -102005305 + AluS SINE Alu 233 303 -6 1677 133 3 63 chr5 101080385 101080711 -102004821 - AluJb SINE Alu 0 308 1 2219 97 33 3 chr5 101081186 101081486 -102004046 + AluSx SINE Alu 1 309 -3 2176 115 0 3 chr5 101081704 101082000 -102003532 + AluSx SINE Alu 1 295 -17 1141 149 14 28 chr5 101082131 101082345 -102003187 - L1PA16 LINE L1 0 6166 5956 335 149 0 0 chr5 101082409 101082456 -102003076 - Alu SINE Alu -255 47 1 322 229 10 83 chr5 101082508 101082604 -102002928 + L2 LINE L2 3225 3313 0 207 88 0 0 chr5 101083175 101083209 -102002323 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2052 133 20 3 chr5 101083818 101084120 -102001412 - AluSx SINE Alu -3 309 3 825 175 39 7 chr5 101084148 101084302 -102001230 - MLT1B LTR MaLR 0 390 232 1210 152 123 166 chr5 101084393 101084912 -102000620 - LTR54B LTR ERV1 -1 497 1 227 269 0 0 chr5 101084939 101084991 -102000541 + T-rich Low_complexity Low_complexity 3 54 0 704 211 0 48 chr5 101085025 101085218 -102000314 + FRAM SINE Alu 10 176 0 867 90 27 89 chr5 101085271 101085488 -102000044 + Tigger3(Golem) DNA MER2_type 32 2891 -138 887 163 23 91 chr5 101085488 101085741 -101999791 - MER4A LTR ERV1 0 465 329 2204 111 60 28 chr5 101085741 101086094 -101999438 - THE1B LTR MaLR 0 364 1 887 163 23 91 chr5 101086094 101086276 -101999256 - MER4A LTR ERV1 -136 329 136 1679 172 8 0 chr5 101086445 101086713 -101998819 - AluSx SINE Alu -42 270 1 989 126 0 15 chr5 101086902 101087037 -101998495 - FLAM_C SINE Alu 0 133 1 190 179 36 36 chr5 101087167 101087223 -101998309 + MIR3 SINE MIR 139 194 -14 532 272 78 22 chr5 101087428 101087608 -101997924 + MLT1K LTR MaLR 261 450 -138 832 273 22 28 chr5 101087651 101087908 -101997624 + HAL1 LINE L1 2023 2279 -228 1828 133 104 23 chr5 101087908 101088255 -101997277 + THE1C LTR MaLR 1 375 0 832 273 22 28 chr5 101088255 101088316 -101997216 + HAL1 LINE L1 2279 2339 -168 1885 145 13 33 chr5 101088324 101088628 -101996904 + AluJb SINE Alu 1 298 -14 834 189 0 0 chr5 101088680 101088802 -101996730 + FLAM_C SINE Alu 2 123 -20 1714 251 74 94 chr5 101088839 101089146 -101996386 - HAL1 LINE L1 -1146 1361 1049 1872 167 6 28 chr5 101089146 101089464 -101996068 - AluJb SINE Alu -1 311 1 1714 251 74 94 chr5 101089464 101089544 -101995988 - HAL1 LINE L1 -1458 1049 969 344 59 59 0 chr5 101089544 101089612 -101995920 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 1714 251 74 94 chr5 101089612 101090277 -101995255 - HAL1 LINE L1 -1538 969 329 2004 109 4 0 chr5 101090277 101090542 -101994990 + AluSq SINE Alu 14 279 -34 33 0 0 0 chr5 101090863 101090896 -101994636 + AT_rich Low_complexity Low_complexity 1 33 0 1113 154 0 24 chr5 101091180 101091349 -101994183 + FRAM SINE Alu 1 164 -12 409 264 38 0 chr5 101092398 101092557 -101992975 + (CATATA)n Simple_repeat Simple_repeat 3 167 0 291 247 52 0 chr5 101092563 101092660 -101992872 + L1ME4a LINE L1 6018 6119 -2 452 309 126 21 chr5 101093969 101094160 -101991372 - MLT1J2 LTR MaLR 0 450 240 237 264 189 0 chr5 101094235 101094341 -101991191 - MLT1J2 LTR MaLR -324 126 1 1682 158 14 27 chr5 101094483 101094780 -101990752 - AluJb SINE Alu -19 293 1 1910 156 10 0 chr5 101095017 101095312 -101990220 + AluSx SINE Alu 1 298 -14 26 0 0 0 chr5 101097025 101097051 -101988481 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 101097173 101097196 -101988336 + AT_rich Low_complexity Low_complexity 1 23 0 2007 126 27 3 chr5 101097687 101097980 -101987552 + AluSx SINE Alu 1 300 -12 1403 265 88 26 chr5 101098756 101099526 -101986006 + L2 LINE L2 2494 3310 -3 190 316 139 13 chr5 101099532 101099690 -101985842 + MIR SINE MIR 72 249 -13 180 269 0 39 chr5 101099804 101099856 -101985676 + L2 LINE L2 2988 3037 -235 625 130 10 10 chr5 101099883 101099983 -101985549 - FLAM_A SINE Alu -13 129 30 258 235 12 47 chr5 101100416 101100501 -101985031 + L1ME LINE L1 46 127 -5943 636 287 71 56 chr5 101100642 101100860 -101984672 - HAL1 LINE L1 -1478 1029 803 1917 125 42 14 chr5 101100860 101101149 -101984383 + AluJb SINE Alu 1 297 -15 636 287 71 56 chr5 101101149 101101254 -101984278 - HAL1 LINE L1 -1704 803 701 188 99 99 0 chr5 101101258 101101329 -101984203 + (TA)n Simple_repeat Simple_repeat 1 78 0 956 318 74 17 chr5 101101360 101101778 -101983754 - HAL1 LINE L1 -1840 667 226 263 234 51 56 chr5 101101877 101102018 -101983514 - L1MEd LINE L1 -4812 1317 1186 2105 120 7 7 chr5 101102018 101102318 -101983214 - AluSg SINE Alu -10 300 1 263 234 51 56 chr5 101102318 101102338 -101983194 - L1MEd LINE L1 -4943 1186 1167 490 339 65 28 chr5 101102398 101102752 -101982780 - L1MEd LINE L1 -5350 769 403 2137 115 27 3 chr5 101102843 101103139 -101982393 - AluSg SINE Alu -7 303 1 2096 123 0 0 chr5 101103533 101103854 -101981678 + AluSx SINE Alu 1 321 0 297 203 135 14 chr5 101103865 101103939 -101981593 - MLT1J2 LTR MaLR -366 84 2 256 336 58 0 chr5 101104592 101104696 -101980836 + L2 LINE L2 3190 3299 -14 195 100 0 0 chr5 101105932 101105962 -101979570 + (CAA)n Simple_repeat Simple_repeat 2 31 0 842 116 29 22 chr5 101106382 101106520 -101979012 - AluSq/x SINE Alu -173 139 1 2888 165 99 92 chr5 101106520 101107289 -101978243 + MER21A LTR ERV1 139 912 -19 1554 174 83 0 chr5 101107348 101107636 -101977896 - AluJb SINE Alu 0 312 1 2214 130 0 13 chr5 101107645 101107960 -101977572 - AluSx SINE Alu -1 311 1 850 143 0 106 chr5 101108590 101108709 -101976823 + U4 snRNA snRNA 1 100 -45 1815 185 3 0 chr5 101108709 101109006 -101976526 - AluJb SINE Alu -12 300 3 850 143 0 106 chr5 101109006 101109047 -101976485 + U4 snRNA snRNA 100 144 -1 1977 142 0 20 chr5 101109317 101109453 -101976079 + AluJb SINE Alu 1 138 -174 2025 124 0 7 chr5 101109453 101109760 -101975772 + AluSx SINE Alu 1 305 0 1977 142 0 20 chr5 101109760 101109924 -101975608 + AluJb SINE Alu 138 296 -16 1051 162 0 46 chr5 101110042 101110237 -101975295 + FAM SINE Alu 1 175 0 21 71 0 0 chr5 101110444 101110486 -101975046 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 101110512 101110533 -101974999 + AT_rich Low_complexity Low_complexity 1 21 0 1306 110 0 0 chr5 101110592 101110765 -101974767 + AluSq SINE Alu 50 222 -91 6173 22 0 0 chr5 101111187 101111902 -101973630 - L1P LINE L1 -848 5298 4584 6649 7 0 0 chr5 101111902 101112599 -101972933 + L1PA2 LINE L1 5458 6155 0 261 128 0 0 chr5 101112599 101112646 -101972886 - Charlie5 DNA MER1_type -64 2548 2502 679 141 0 0 chr5 101112805 101112904 -101972628 - AluSg/x SINE Alu -1 311 213 2215 122 10 0 chr5 101113187 101113313 -101972219 + AluSx SINE Alu 1 124 -188 189 0 0 0 chr5 101113313 101113334 -101972198 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2215 122 10 0 chr5 101113334 101113511 -101972021 + AluSx SINE Alu 124 307 -5 1758 234 59 7 chr5 101113618 101114062 -101971470 + MLT1C LTR MaLR 1 467 0 303 234 365 15 chr5 101114143 101114280 -101971252 - MER5A DNA MER1_type -1 188 4 2017 96 65 17 chr5 101114301 101114592 -101970940 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 101114593 101114614 -101970918 + AT_rich Low_complexity Low_complexity 1 21 0 2083 117 27 0 chr5 101114624 101114924 -101970608 + AluSg SINE Alu 1 308 -2 794 126 0 0 chr5 101114924 101115027 -101970505 + AluSg/x SINE Alu 132 234 -76 330 87 0 0 chr5 101115173 101115219 -101970313 + (GGA)n Simple_repeat Simple_repeat 2 47 0 940 131 0 29 chr5 101115269 101115406 -101970126 - FLAM_C SINE Alu 0 133 1 1727 178 17 3 chr5 101115783 101116075 -101969457 + AluJb SINE Alu 1 296 -16 201 377 38 28 chr5 101116087 101116193 -101969339 - MER5B DNA MER1_type -65 113 7 23 68 0 0 chr5 101116231 101116275 -101969257 + AT_rich Low_complexity Low_complexity 1 44 0 1760 175 0 9 chr5 101116280 101116595 -101968937 + AluJb SINE Alu 1 312 0 864 160 15 0 chr5 101116603 101116734 -101968798 + FLAM_A SINE Alu 1 133 0 272 283 52 45 chr5 101116919 101117132 -101968400 - MER5A DNA MER1_type -3 186 1 2490 43 30 3 chr5 101117262 101117563 -101967969 - AluY SINE Alu -2 309 1 196 316 40 26 chr5 101119172 101119248 -101966284 - MIR3 SINE MIR -46 162 86 277 143 0 20 chr5 101119601 101119650 -101965882 - MER4A LTR ERV1 -616 48 1 889 154 44 0 chr5 101119650 101119786 -101965746 + Tigger3(Golem) DNA MER2_type 2887 3028 -1 191 364 61 15 chr5 101120135 101120267 -101965265 + L2 LINE L2 3116 3253 -19 638 276 29 53 chr5 101120607 101120853 -101964679 - MIR SINE MIR -15 247 8 240 343 67 9 chr5 101120865 101120970 -101964562 - MIR SINE MIR -116 146 36 1650 178 6 38 chr5 101121148 101121468 -101964064 + AluJb SINE Alu 3 312 0 1121 207 124 0 chr5 101122801 101123076 -101962456 + 7SLRNA srpRNA srpRNA 10 318 -2 730 213 7 0 chr5 101123274 101123415 -101962117 - FLAM_C SINE Alu 0 143 2 31 58 0 0 chr5 101124318 101124370 -101961162 + AT_rich Low_complexity Low_complexity 1 52 0 563 254 124 0 chr5 101124377 101124562 -101960970 - MIR SINE MIR -1 261 54 1293 91 91 0 chr5 101124662 101124859 -101960673 - MER41B LTR ERV1 -417 218 4 1820 138 14 7 chr5 101126277 101126560 -101958972 + AluJb SINE Alu 11 295 -17 660 156 70 189 chr5 101126668 101126690 -101958842 + MER21B LTR ERV1 5 28 -835 2145 132 0 0 chr5 101126690 101126993 -101958539 + AluSx SINE Alu 1 303 -9 660 156 70 189 chr5 101126993 101127240 -101958292 + MER21B LTR ERV1 28 242 -621 2232 89 0 0 chr5 101127291 101127571 -101957961 + AluY SINE Alu 1 280 -31 1344 146 33 0 chr5 101127619 101127831 -101957701 - AluJb SINE Alu -93 219 1 542 224 39 101 chr5 101127835 101128014 -101957518 + MER21B LTR ERV1 298 465 -398 755 185 0 0 chr5 101128114 101128233 -101957299 + FRAM SINE Alu 41 159 -17 3255 78 23 2 chr5 101128329 101128348 -101957184 - MER41A LTR ERV1 -107 447 430 2163 125 0 3 chr5 101128348 101128661 -101956871 + AluSx SINE Alu 1 312 0 3255 78 23 2 chr5 101128661 101129079 -101956453 - MER41A LTR ERV1 -124 430 1 343 232 3 12 chr5 101129093 101129178 -101956354 + AluJ/FLAM SINE Alu 1 63 -239 790 108 150 0 chr5 101129182 101129302 -101956230 + FRAM SINE Alu 25 162 -14 2329 69 3 3 chr5 101129522 101129895 -101955637 - AluY SINE Alu 0 373 1 2235 127 7 0 chr5 101130078 101130386 -101955146 + AluSx SINE Alu 1 310 -2 696 231 7 0 chr5 101130471 101130618 -101954914 + MER5A DNA MER1_type 42 189 0 2055 138 3 0 chr5 101130966 101131262 -101954270 + AluSq SINE Alu 1 297 -16 2226 122 0 3 chr5 101131591 101131894 -101953638 + AluSx SINE Alu 1 302 -10 237 252 22 25 chr5 101132088 101132179 -101953353 - MIR SINE MIR -59 149 82 288 359 0 0 chr5 101132525 101132617 -101952915 - L2 LINE L2 0 3313 3222 1834 177 3 0 chr5 101133071 101133371 -101952161 + AluJo SINE Alu 1 301 -11 671 134 10 10 chr5 101133985 101134082 -101951450 - AluSg/x SINE Alu -137 173 77 501 17 0 0 chr5 101134186 101134244 -101951288 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 1567 170 55 24 chr5 101134257 101134546 -101950986 - AluJo SINE Alu -14 298 1 1874 158 0 13 chr5 101134726 101135029 -101950503 + AluSx SINE Alu 1 299 -13 2023 191 96 92 chr5 101135582 101136147 -101949385 - MLT1F1 LTR MaLR 0 567 1 518 325 18 6 chr5 101136443 101136612 -101948920 + MER5B DNA MER1_type 8 178 0 1245 140 72 5 chr5 101137459 101137666 -101947866 - AluSx SINE Alu -91 221 1 207 226 16 32 chr5 101137708 101137770 -101947762 - MIR SINE MIR -111 151 91 242 298 0 32 chr5 101137788 101137882 -101947650 + T-rich Low_complexity Low_complexity 2 92 0 1686 167 67 19 chr5 101139906 101140495 -101945037 + MER39 LTR ERV1 1 706 -1 346 186 69 29 chr5 101140785 101140887 -101944645 + MER39 LTR ERV1 598 703 -4 22 0 0 0 chr5 101140994 101141016 -101944516 + AT_rich Low_complexity Low_complexity 1 22 0 531 317 68 16 chr5 101141517 101141766 -101943766 - MIR SINE MIR 0 262 1 2152 96 3 90 chr5 101142013 101142347 -101943185 + AluSx SINE Alu 2 306 -6 187 235 0 0 chr5 101142616 101142650 -101942882 - MIR SINE MIR -160 102 69 22 0 0 0 chr5 101142995 101143017 -101942515 + AT_rich Low_complexity Low_complexity 1 22 0 183 42 0 0 chr5 101143524 101143548 -101941984 + (T)n Simple_repeat Simple_repeat 1 24 0 680 214 125 0 chr5 101144263 101144431 -101941101 - MER5A DNA MER1_type 0 189 1 537 259 142 25 chr5 101145540 101145702 -101939830 - MER5A DNA MER1_type 0 189 9 362 313 61 37 chr5 101145716 101145879 -101939653 - MER5B DNA MER1_type -5 173 7 371 244 184 28 chr5 101145893 101146110 -101939422 - MER112 DNA MER1_type -1 255 5 823 208 142 25 chr5 101146110 101146350 -101939182 - MER58 DNA MER1_type -72 269 2 1418 125 7 139 chr5 101147154 101147493 -101938039 + AluJo SINE Alu 22 320 0 576 347 167 14 chr5 101147863 101148289 -101937243 - L2 LINE L2 -616 2698 2208 299 273 20 40 chr5 101148291 101148390 -101937142 - L2 LINE L2 -1 3312 3216 1558 181 7 11 chr5 101148482 101148763 -101936769 + AluJb SINE Alu 1 280 -32 216 0 0 0 chr5 101148764 101148788 -101936744 + (CAAT)n Simple_repeat Simple_repeat 1 24 0 758 321 137 9 chr5 101148792 101149107 -101936425 - L2 LINE L2 -338 2976 2622 1274 202 35 53 chr5 101149140 101149516 -101936016 + MLT1A2 LTR MaLR 2 370 -4 303 259 58 22 chr5 101150920 101151059 -101934473 + MLT1J2 LTR MaLR 69 212 -238 1791 167 54 19 chr5 101151630 101151880 -101933652 + MLT1B LTR MaLR 1 270 -120 1842 170 3 13 chr5 101151880 101152192 -101933340 + AluJb SINE Alu 1 309 -3 1791 167 54 19 chr5 101152192 101152312 -101933220 + MLT1B LTR MaLR 270 384 -6 305 250 23 45 chr5 101152580 101152668 -101932864 + MER5B DNA MER1_type 90 175 -3 309 316 22 22 chr5 101153152 101153288 -101932244 - L1ME LINE L1 -281 5840 5705 954 155 16 21 chr5 101153291 101153484 -101932048 + L1MB8 LINE L1 5987 6178 0 7655 120 11 5 chr5 101153493 101154891 -101930641 + L1P4 LINE L1 4090 5500 -674 2046 123 3 26 chr5 101154891 101155200 -101930332 + AluSq SINE Alu 1 302 -11 7655 120 11 5 chr5 101155200 101155338 -101930194 + L1P4 LINE L1 5500 5636 -538 1079 66 0 26 chr5 101155338 101155489 -101930043 + L1PA11 LINE L1 6028 6174 0 213 103 88 0 chr5 101155570 101155638 -101929894 + (TTAA)n Simple_repeat Simple_repeat 4 77 0 744 158 25 0 chr5 101155694 101155814 -101929718 + AluJb SINE Alu 1 123 -189 1548 182 54 4 chr5 101155829 101156109 -101929423 + AluJo SINE Alu 1 294 -18 2456 139 9 36 chr5 101156440 101156886 -101928646 + Tigger2a DNA MER2_type 1 434 0 1099 251 56 45 chr5 101157002 101157517 -101928015 + L1ME2 LINE L1 3095 3615 -2531 1872 206 34 64 chr5 101157520 101158003 -101927529 + L1ME2 LINE L1 5114 5665 -499 2222 100 3 7 chr5 101158003 101158303 -101927229 + AluY SINE Alu 1 299 -12 1872 206 34 64 chr5 101158303 101158701 -101926831 + L1ME2 LINE L1 5665 6074 -90 3917 118 35 84 chr5 101158701 101158866 -101926666 - Tigger3b DNA MER2_type -1831 1198 1026 1853 158 6 56 chr5 101158866 101159221 -101926311 + MER1B DNA MER1_type 1 337 0 3917 118 35 84 chr5 101159221 101159916 -101925616 - Tigger3b DNA MER2_type -2003 1026 380 4650 122 48 1 chr5 101159941 101160704 -101924828 - Tigger1 DNA MER2_type -51 2367 1569 * 6106 126 41 8 chr5 101160700 101161156 -101924376 - Tigger1 DNA MER2_type -1366 1052 613 2589 58 0 3 chr5 101161156 101161467 -101924065 - AluY SINE Alu 0 311 2 6106 126 41 8 chr5 101161467 101162025 -101923507 - Tigger1 DNA MER2_type -1805 613 4 1728 170 51 24 chr5 101162028 101162398 -101923134 - Tigger3b DNA MER2_type -850 381 2 1105 94 0 0 chr5 101163271 101163409 -101922123 + AluSq/x SINE Alu 1 138 -174 189 329 0 0 chr5 101163780 101163853 -101921679 + L2 LINE L2 2286 2358 -956 1009 169 0 23 chr5 101163853 101164025 -101921507 - FRAM SINE Alu -10 166 1 191 358 86 25 chr5 101164578 101164740 -101920792 + L2 LINE L2 2850 3021 -251 * 424 309 49 60 chr5 101164724 101164989 -101920543 + L2 LINE L2 2804 3065 -207 446 266 58 23 chr5 101165092 101165265 -101920267 - MLT1J2 LTR MaLR -4 446 268 510 252 126 0 chr5 101165296 101165447 -101920085 - MLT1J1 LTR MaLR -272 174 5 2403 68 10 0 chr5 101165586 101165913 -101919619 - AluY SINE Alu 0 311 1 1704 145 66 38 chr5 101166098 101166463 -101919069 + THE1C LTR MaLR 1 375 0 2814 140 11 0 chr5 101166495 101166952 -101918580 - MLT1C LTR MaLR 0 467 6 274 331 33 58 chr5 101167780 101167901 -101917631 - MIR SINE MIR -65 143 26 1938 117 0 35 chr5 101168042 101168371 -101917161 + AluSg SINE Alu 1 319 0 1914 155 3 7 chr5 101168561 101168852 -101916680 + AluSx SINE Alu 1 290 -22 776 154 0 39 chr5 101169130 101169260 -101916272 + FLAM_C SINE Alu 1 125 -8 32 0 0 0 chr5 101169265 101169297 -101916235 + AT_rich Low_complexity Low_complexity 1 32 0 240 310 0 33 chr5 101169694 101169824 -101915708 + CT-rich Low_complexity Low_complexity 1 125 0 211 318 112 19 chr5 101170206 101170313 -101915219 + MER5A DNA MER1_type 1 117 -72 297 226 0 44 chr5 101170401 101170582 -101914950 + (TAA)n Simple_repeat Simple_repeat 2 174 0 183 80 0 0 chr5 101172547 101172572 -101912960 + (CAT)n Simple_repeat Simple_repeat 2 26 0 1861 152 7 36 chr5 101172747 101172840 -101912692 + AluJb SINE Alu 1 95 -217 2239 92 0 0 chr5 101172840 101173241 -101912291 + AluSx SINE Alu 1 401 0 1861 152 7 36 chr5 101173241 101173449 -101912083 + AluJb SINE Alu 95 294 -18 236 125 0 42 chr5 101173803 101173851 -101911681 - MADE1 DNA Mariner 0 80 35 2458 82 0 0 chr5 101173858 101174162 -101911370 + AluSx SINE Alu 1 304 -8 637 155 0 10 chr5 101174169 101174304 -101911228 + FLAM_A SINE Alu 18 151 0 225 263 10 101 chr5 101174435 101174534 -101910998 + L2 LINE L2 3182 3271 -1 351 188 0 14 chr5 101175019 101175088 -101910444 - MIR SINE MIR -119 143 76 2335 115 0 13 chr5 101175128 101175442 -101910090 + AluSx SINE Alu 2 311 -1 795 181 11 64 chr5 101175643 101175767 -101909765 - MER5B DNA MER1_type 0 178 66 2244 107 0 3 chr5 101175767 101176066 -101909466 - AluSc SINE Alu -11 298 1 795 181 11 64 chr5 101176066 101176129 -101909403 - MER5B DNA MER1_type -112 66 1 550 263 0 0 chr5 101176846 101176979 -101908553 - MER94 DNA DNA 0 134 2 296 225 0 0 chr5 101177144 101177224 -101908308 + L1MEc LINE L1 2177 2256 -4140 278 290 32 0 chr5 101177650 101177743 -101907789 + MER94 DNA DNA 39 134 0 402 331 158 25 chr5 101177942 101178304 -101907228 + L3 LINE CR1 1094 1503 -74 1605 157 0 69 chr5 101178304 101178636 -101906896 - AluJb SINE Alu 0 311 1 1512 291 48 25 chr5 101178698 101179258 -101906274 + MLT1K LTR MaLR 16 588 0 21 0 0 0 chr5 101179583 101179604 -101905928 + AT_rich Low_complexity Low_complexity 1 21 0 326 224 0 24 chr5 101179749 101179834 -101905698 - LTR67 LTR ERVL -38 519 437 761 360 40 16 chr5 101180606 101181350 -101904182 - ERVL LTR ERVL -519 5245 4484 1205 183 12 50 chr5 101181411 101181651 -101903881 + Tigger7 DNA MER2_type 1 231 -502 573 90 27 81 chr5 101181655 101181679 -101903853 + Tigger7 DNA MER2_type 2386 2410 -81 2270 116 47 8 chr5 101181679 101182040 -101903492 - THE1C LTR MaLR 0 375 1 10322 109 38 8 chr5 101182040 101183574 -101901958 - THE1C-int LTR MaLR 0 1580 1 2170 113 28 64 chr5 101183574 101183797 -101901735 - THE1C LTR MaLR 0 375 167 2046 120 0 11 chr5 101183797 101184117 -101901415 + AluSx SINE Alu 1 317 0 2170 113 28 64 chr5 101184117 101184279 -101901253 - THE1C LTR MaLR -208 167 1 573 90 27 81 chr5 101184279 101184363 -101901169 + Tigger7 DNA MER2_type 2407 2490 -1 22 56 0 0 chr5 101184382 101184418 -101901114 + AT_rich Low_complexity Low_complexity 1 36 0 214 338 0 15 chr5 101184418 101184486 -101901046 + L2 LINE L2 3139 3205 -67 860 286 28 97 chr5 101187156 101187621 -101897911 - L2 LINE L2 -337 2977 2545 2152 173 65 65 chr5 101188210 101188720 -101896812 - LTR54 LTR ERV1 0 510 1 2062 212 66 53 chr5 101188722 101188780 -101896752 - LTR49-int LTR ERV1 -394 7143 7087 2357 96 0 10 chr5 101188780 101189093 -101896439 + AluSq SINE Alu 1 310 -3 2062 212 66 53 chr5 101189093 101189581 -101895951 - LTR49-int LTR ERV1 -450 7087 6590 260 275 62 12 chr5 101189626 101189706 -101895826 - LTR49-int LTR ERV1 -689 4182 4099 1002 176 18 12 chr5 101189715 101189880 -101895652 + FAM SINE Alu 1 166 -9 437 238 19 9 chr5 101189904 101190009 -101895523 - LTR49-int LTR ERV1 -760 4111 4006 413 232 0 0 chr5 101190009 101190091 -101895441 + FLAM_C SINE Alu 57 138 -5 1070 254 55 39 chr5 101190096 101190403 -101895129 - LTR49-int LTR ERV1 -846 4025 3714 225 232 192 40 chr5 101190404 101190503 -101895029 - LTR37A LTR ERV1 -309 117 4 3127 200 75 89 chr5 101190503 101191260 -101894272 - LTR49-int LTR ERV1 -525 5094 4328 1853 137 18 21 chr5 101191260 101191571 -101893961 - AluSx SINE Alu 0 310 1 3127 200 75 89 chr5 101191571 101192177 -101893355 - LTR49-int LTR ERV1 -1291 4328 3291 1989 146 7 0 chr5 101192178 101192466 -101893066 + AluSx SINE Alu 1 290 -22 800 228 9 76 chr5 101192612 101192836 -101892696 + MER63A DNA MER1_type 2 210 0 612 282 41 28 chr5 101193635 101193808 -101891724 - L1M4 LINE L1 -1537 4609 4429 2151 141 0 0 chr5 101193808 101194113 -101891419 + AluSx SINE Alu 1 305 -7 612 282 41 28 chr5 101194113 101194230 -101891302 - L1M4 LINE L1 -1717 4429 4315 1780 165 4 4 chr5 101194275 101194554 -101890978 - AluJb SINE Alu -8 304 26 648 228 11 26 chr5 101194575 101194764 -101890768 - L1M4 LINE L1 -2166 3980 3795 1555 244 111 17 chr5 101194820 101195242 -101890290 - LTR40b LTR ERVL 0 462 1 653 157 19 0 chr5 101195364 101195472 -101890060 - AluJ SINE Alu -47 265 156 640 185 0 0 chr5 101195465 101195573 -101889959 - AluJ SINE Alu -194 118 11 * 1007 217 101 19 chr5 101195925 101196192 -101889340 + AluSx SINE Alu 1 289 -13 196 109 22 22 chr5 101196243 101196289 -101889243 + A-rich Low_complexity Low_complexity 2 47 0 2244 119 3 3 chr5 101196459 101196771 -101888761 - AluSx SINE Alu 0 312 1 286 237 21 0 chr5 101196775 101196872 -101888660 + CT-rich Low_complexity Low_complexity 2 100 0 238 193 76 84 chr5 101196874 101196905 -101888627 - L2 LINE L2 0 3272 3242 1403 113 80 0 chr5 101196905 101197118 -101888414 + MER30 DNA MER1_type 1 230 0 238 193 76 84 chr5 101197118 101197205 -101888327 - L2 LINE L2 -30 3242 3155 338 221 62 44 chr5 101197232 101197345 -101888187 + L2 LINE L2 3158 3272 0 421 236 96 38 chr5 101198733 101198890 -101886642 + MIR SINE MIR 79 244 -18 2485 72 0 7 chr5 101199350 101199656 -101885876 + AluY SINE Alu 1 304 -7 2538 103 8 0 chr5 101199976 101200336 -101885196 - L1PB2 LINE L1 -283 5868 5506 246 32 0 0 chr5 101200351 101200382 -101885150 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 718 179 0 0 chr5 101200382 101200499 -101885033 - AluSq/x SINE Alu -195 117 1 2199 128 3 0 chr5 101200519 101200824 -101884708 - AluSp SINE Alu -7 306 1 1976 178 55 49 chr5 101200827 101200959 -101884573 - L1PB2 LINE L1 -657 5494 5364 2394 99 3 0 chr5 101200959 101201263 -101884269 - AluSp SINE Alu -8 305 1 1976 178 55 49 chr5 101201263 101201840 -101883692 - L1PB2 LINE L1 -787 5364 4774 1600 161 0 77 chr5 101202077 101202203 -101883329 + AluJo SINE Alu 1 135 -177 2064 117 0 42 chr5 101202203 101202510 -101883022 - AluSx SINE Alu -18 294 1 1600 161 0 77 chr5 101202510 101202706 -101882826 + AluJo SINE Alu 135 298 -14 2083 119 10 10 chr5 101202940 101203242 -101882290 - AluSx SINE Alu -10 302 1 555 261 45 20 chr5 101203514 101203713 -101881819 + L2 LINE L2 2426 2629 -685 35 65 0 22 chr5 101203713 101203753 -101881779 + AT_rich Low_complexity Low_complexity 1 40 -50 2255 107 0 3 chr5 101203753 101204061 -101881471 - AluSg SINE Alu -3 307 1 35 65 0 22 chr5 101204061 101204112 -101881420 + AT_rich Low_complexity Low_complexity 40 90 0 21 0 0 0 chr5 101204147 101204168 -101881364 + AT_rich Low_complexity Low_complexity 1 21 0 500 250 59 7 chr5 101204313 101204465 -101881067 - LTR33 LTR ERVL -2 519 360 250 164 18 0 chr5 101204553 101204608 -101880924 - LTR33 LTR ERVL -454 67 12 2471 60 0 7 chr5 101204712 101205013 -101880519 - AluSp SINE Alu -14 299 1 297 240 52 21 chr5 101205357 101205453 -101880079 - L2 LINE L2 0 3313 3215 1929 121 3 10 chr5 101205535 101205833 -101879699 - AluSx SINE Alu -11 301 6 1031 147 0 16 chr5 101205872 101206062 -101879470 + AluSg/x SINE Alu 122 308 -4 603 256 82 41 chr5 101206066 101206396 -101879136 + L2 LINE L2 2766 3111 -202 2280 89 0 49 chr5 101206396 101206723 -101878809 - AluY SINE Alu 0 311 1 603 256 82 41 chr5 101206723 101206765 -101878767 + L2 LINE L2 3111 3150 -163 711 214 9 81 chr5 101206869 101207079 -101878453 - MIR SINE MIR -24 238 44 223 286 143 8 chr5 101207079 101207198 -101878334 + L2 LINE L2 3178 3312 -1 * 345 211 63 21 chr5 101207197 101207292 -101878240 + MIR SINE MIR 148 246 -16 2156 106 0 3 chr5 101208158 101208461 -101877071 - AluSg SINE Alu 0 302 1 32 75 0 0 chr5 101208509 101208576 -101876956 + AT_rich Low_complexity Low_complexity 1 67 0 198 0 0 0 chr5 101209016 101209038 -101876494 + (CAG)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr5 101209728 101209749 -101875783 + AT_rich Low_complexity Low_complexity 1 21 0 2302 106 3 0 chr5 101210073 101210375 -101875157 - AluSp SINE Alu -10 303 1 1986 131 3 0 chr5 101210660 101210978 -101874554 - AluSx SINE Alu 0 319 1 234 0 0 0 chr5 101211033 101211059 -101874473 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1148 132 61 5 chr5 101211080 101211277 -101874255 - AluJo SINE Alu -82 230 23 469 333 126 19 chr5 101211475 101211816 -101873716 + L2 LINE L2 2465 2861 -453 1754 168 16 47 chr5 101211816 101212138 -101873394 - AluJo SINE Alu 0 312 1 469 333 126 19 chr5 101212138 101212217 -101873315 + L2 LINE L2 2861 2930 -384 328 288 55 34 chr5 101212354 101212500 -101873032 + MLT1J1 LTR MaLR 13 161 -285 347 194 56 0 chr5 101212645 101212717 -101872815 + L2 LINE L2 3189 3264 -8 331 350 77 7 chr5 101212786 101212929 -101872603 - L2 LINE L2 -4 3268 3116 226 170 0 0 chr5 101212943 101212990 -101872542 + Alu SINE Alu 257 303 0 * 1585 218 49 3 chr5 101212986 101213138 -101872394 - MER82 DNA MER2_type -292 361 218 1858 169 7 3 chr5 101213138 101213446 -101872086 - AluSx SINE Alu -3 309 1 3732 108 57 10 chr5 101213453 101214034 -101871498 + MER4B LTR ERV1 1 608 -2 1585 218 49 3 chr5 101214034 101214217 -101871315 - MER82 DNA MER2_type -440 213 2 1961 159 0 16 chr5 101214250 101214558 -101870974 + AluJb SINE Alu 1 303 -9 893 98 0 0 chr5 101214658 101214781 -101870751 - AluSq/x SINE Alu -180 133 11 798 176 0 14 chr5 101214792 101214934 -101870598 - FLAM_A SINE Alu -2 140 1 497 16 0 0 chr5 101215012 101215075 -101870457 - L1PA2 LINE L1 0 6155 6093 808 139 0 9 chr5 101215605 101215720 -101869812 + AluJb SINE Alu 7 120 -192 268 187 13 13 chr5 101215753 101215828 -101869704 + (TG)n Simple_repeat Simple_repeat 2 76 0 2246 97 10 0 chr5 101215932 101216220 -101869312 + AluSc SINE Alu 1 291 -18 387 277 23 8 chr5 101216238 101216368 -101869164 - MER5A DNA MER1_type -49 140 9 2200 114 0 7 chr5 101216895 101217194 -101868338 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 101217197 101217220 -101868312 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 101217420 101217446 -101868086 + (TA)n Simple_repeat Simple_repeat 1 26 0 2196 111 3 0 chr5 101217447 101217736 -101867796 - AluSx SINE Alu -22 290 1 1381 259 60 71 chr5 101217740 101218076 -101867456 - L2 LINE L2 -243 3070 2732 2301 113 3 0 chr5 101218076 101218385 -101867147 - AluSx SINE Alu -2 310 1 1381 259 60 71 chr5 101218385 101218437 -101867095 - L2 LINE L2 -581 2732 2681 2593 58 0 0 chr5 101218437 101218746 -101866786 - AluY SINE Alu -2 309 1 1381 259 60 71 chr5 101218746 101219011 -101866521 - L2 LINE L2 -632 2681 2403 693 206 29 69 chr5 101219130 101219334 -101866198 + MIR SINE MIR 37 232 -30 329 183 32 43 chr5 101219520 101219613 -101865919 + AluSg/x SINE Alu 209 300 0 1304 143 0 0 chr5 101220035 101220224 -101865308 - AluSg/x SINE Alu -14 296 108 404 164 0 0 chr5 101220667 101220740 -101864792 + FAM SINE Alu 106 178 -1 2136 142 0 0 chr5 101220864 101221174 -101864358 + AluSq SINE Alu 1 310 -3 400 294 25 6 chr5 101221335 101221495 -101864037 - L2 LINE L2 -622 2692 2530 994 137 58 97 chr5 101221578 101221804 -101863728 - MER20 DNA MER1_type 0 219 3 1451 194 11 11 chr5 101221851 101222124 -101863408 + AluJo SINE Alu 1 273 -39 249 33 0 0 chr5 101222129 101222159 -101863373 + (TC)n Simple_repeat Simple_repeat 1 30 0 903 163 54 0 chr5 101222159 101222306 -101863226 - AluSg/x SINE Alu -25 287 133 1877 149 31 3 chr5 101222311 101222600 -101862932 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 101222797 101222817 -101862715 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2967 86 261 2 chr5 101222825 101223324 -101862208 - SVA Other Other -437 949 322 859 179 7 7 chr5 101224198 101224343 -101861189 - FRAM SINE Alu -30 146 2 2181 131 0 3 chr5 101224467 101224773 -101860759 - AluSx SINE Alu -7 305 1 1960 125 0 44 chr5 101224968 101225289 -101860243 + AluSx SINE Alu 1 308 0 200 308 39 0 chr5 101225336 101225414 -101860118 + MIR SINE MIR 83 163 -99 506 252 146 32 chr5 101225416 101225662 -101859870 - MLT1L LTR MaLR -186 429 156 2270 93 13 16 chr5 101225675 101225985 -101859547 - AluSc SINE Alu 0 309 1 190 212 71 111 chr5 101226176 101226275 -101859257 - MIR SINE MIR -22 240 146 878 191 6 46 chr5 101226277 101226374 -101859158 - FAM SINE Alu -151 170 71 2035 132 46 62 chr5 101226374 101226447 -101859085 - THE1B LTR MaLR 0 364 291 2309 93 0 7 chr5 101226447 101226748 -101858784 - AluSc SINE Alu -10 299 1 2035 132 46 62 chr5 101226748 101227044 -101858488 - THE1B LTR MaLR -73 291 1 12455 81 5 0 chr5 101227044 101228617 -101856915 - THE1B-int LTR MaLR 0 1580 1 2157 125 54 23 chr5 101228617 101228970 -101856562 - THE1B LTR MaLR 0 364 1 878 191 6 46 chr5 101228970 101229043 -101856489 - FAM SINE Alu -247 74 5 524 283 7 0 chr5 101229049 101229187 -101856345 - MIR SINE MIR -108 154 16 1092 200 38 122 chr5 101229233 101229628 -101855904 + MLT1A1 LTR MaLR 4 365 0 913 191 31 10 chr5 101229777 101229971 -101855561 + AluJ SINE Alu 1 198 -114 532 191 0 11 chr5 101230081 101230175 -101855357 + AluJ SINE Alu 198 290 -22 188 0 74 0 chr5 101230175 101230202 -101855330 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 1490 146 0 0 chr5 101230248 101230467 -101855065 - AluSg/x SINE Alu -12 298 80 573 198 69 125 chr5 101230477 101230709 -101854823 - MER112 DNA MER1_type -34 226 8 258 200 144 22 chr5 101230731 101230821 -101854711 + MER5A DNA MER1_type 9 109 -80 441 0 0 0 chr5 101231122 101231171 -101854361 + (CA)n Simple_repeat Simple_repeat 2 50 0 391 302 88 26 chr5 101231171 101231363 -101854169 + MER102b DNA MER1_type 138 341 0 943 167 0 19 chr5 101231478 101231634 -101853898 + FAM SINE Alu 22 174 -11 1384 136 14 9 chr5 101231637 101231851 -101853681 + MER50 LTR ERV1 497 711 -23 308 249 12 6 chr5 101231850 101231964 -101853568 + MLT1L LTR MaLR 466 605 -10 * 2213 128 68 16 chr5 101231976 101232342 -101853190 + MER50-int LTR ERV1 35 419 -6786 2201 131 0 0 chr5 101232364 101232676 -101852856 + AluSx SINE Alu 1 312 0 510 289 67 19 chr5 101233235 101233443 -101852089 - MLT1K LTR MaLR -10 578 361 384 286 101 24 chr5 101233469 101233637 -101851895 - MLT1L LTR MaLR -270 345 165 2234 119 3 0 chr5 101233870 101234164 -101851368 - AluSp SINE Alu -18 295 1 651 199 2 13 chr5 101234232 101234374 -101851158 - MLT1A2 LTR MaLR 0 405 254 771 252 21 71 chr5 101234916 101235030 -101850502 - MLT1A2 LTR MaLR -106 268 150 2393 97 0 10 chr5 101235030 101235340 -101850192 - AluSx SINE Alu -5 307 1 771 252 21 71 chr5 101235340 101235507 -101850025 - MLT1A2 LTR MaLR -224 150 1 647 147 21 91 chr5 101235804 101235855 -101849677 - FLAM_C SINE Alu -179 133 80 2225 128 0 0 chr5 101235855 101236161 -101849371 - AluSx SINE Alu -6 306 1 647 147 21 91 chr5 101236161 101236252 -101849280 - FLAM_C SINE Alu -232 80 1 272 133 83 50 chr5 101237001 101237061 -101848471 - FLAM SINE Alu -13 120 68 452 343 47 17 chr5 101237706 101237942 -101847590 + MIR SINE MIR 4 246 -16 438 20 0 0 chr5 101238732 101238783 -101846749 + (CA)n Simple_repeat Simple_repeat 2 52 0 1908 143 6 58 chr5 101238814 101238948 -101846584 + AluSx SINE Alu 1 140 -172 2354 109 0 0 chr5 101238948 101239260 -101846272 + AluSx SINE Alu 1 312 0 1908 143 6 58 chr5 101239260 101239454 -101846078 + AluSx SINE Alu 140 312 0 186 296 45 57 chr5 101239725 101239813 -101845719 - MIR3 SINE MIR -12 196 110 33 25 0 0 chr5 101239870 101239910 -101845622 + AT_rich Low_complexity Low_complexity 1 40 0 769 145 0 0 chr5 101239910 101240027 -101845505 - FLAM_C SINE Alu -15 118 2 425 197 22 45 chr5 101240195 101240373 -101845159 + T-rich Low_complexity Low_complexity 1 174 0 199 310 141 63 chr5 101240537 101240679 -101844853 - MIR3 SINE MIR -14 194 42 4296 150 24 0 chr5 101240682 101241404 -101844128 - L1PA16 LINE L1 0 6166 5428 271 70 0 0 chr5 101241435 101241478 -101844054 - L1PA16 LINE L1 -723 5443 5401 1152 182 26 93 chr5 101241700 101242002 -101843530 + MLT1C LTR MaLR 1 282 -185 2003 173 62 21 chr5 101242004 101242041 -101843491 - MSTB LTR MaLR -4 453 419 1595 170 0 71 chr5 101242041 101242377 -101843155 + AluJo SINE Alu 1 312 0 2003 173 62 21 chr5 101242377 101242766 -101842766 - MSTB LTR MaLR -38 419 1 605 202 69 35 chr5 101242772 101242945 -101842587 + MLT1C LTR MaLR 285 463 -4 207 69 0 0 chr5 101243422 101243451 -101842081 + (A)n Simple_repeat Simple_repeat 1 29 0 1484 162 53 4 chr5 101243680 101243927 -101841605 - AluJb SINE Alu -45 267 9 2371 77 10 0 chr5 101243984 101244281 -101841251 + AluSx SINE Alu 3 302 -10 2393 98 3 0 chr5 101245085 101245392 -101840140 + AluSx SINE Alu 1 308 -4 248 352 45 0 chr5 101245467 101245555 -101839977 - MER5A DNA MER1_type -90 99 8 1778 161 7 10 chr5 101245688 101245980 -101839552 + AluJb SINE Alu 3 293 -19 829 178 68 6 chr5 101246484 101246647 -101838885 + AluJo SINE Alu 24 196 -116 2067 123 0 0 chr5 101246859 101247135 -101838397 - AluSx SINE Alu -11 301 26 1703 169 20 7 chr5 101247275 101247570 -101837962 + AluJo SINE Alu 2 300 -12 1926 159 3 0 chr5 101247857 101248152 -101837380 + AluJb SINE Alu 1 296 -16 1163 171 24 14 chr5 101248282 101248492 -101837040 + AluJo SINE Alu 3 214 -98 198 0 0 0 chr5 101249667 101249689 -101835843 + (CAA)n Simple_repeat Simple_repeat 3 24 0 29 0 0 0 chr5 101250197 101250226 -101835306 + AT_rich Low_complexity Low_complexity 1 29 0 180 125 0 0 chr5 101250385 101250417 -101835115 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 213 94 0 0 chr5 101250911 101250943 -101834589 + (A)n Simple_repeat Simple_repeat 1 32 0 286 378 58 29 chr5 101252901 101253073 -101832459 + L2 LINE L2 2997 3173 -99 1672 173 37 13 chr5 101254510 101254810 -101830722 + AluJb SINE Alu 1 307 -5 22 0 0 0 chr5 101257439 101257461 -101828071 + AT_rich Low_complexity Low_complexity 1 22 0 357 272 114 44 chr5 101258893 101259051 -101826481 + MIR SINE MIR 10 178 -84 28 61 0 0 chr5 101259368 101259417 -101826115 + AT_rich Low_complexity Low_complexity 1 49 0 204 40 0 0 chr5 101260247 101260272 -101825260 + (CCG)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr5 101263457 101263478 -101822054 + (CCGCG)n Simple_repeat Simple_repeat 1 21 0 21 57 0 0 chr5 101265354 101265389 -101820143 + AT_rich Low_complexity Low_complexity 1 35 0 2086 125 0 3 chr5 101265686 101265981 -101819551 - AluSx SINE Alu -18 294 1 216 0 0 0 chr5 101266003 101266027 -101819505 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 101266709 101266733 -101818799 + AT_rich Low_complexity Low_complexity 1 24 0 359 82 14 110 chr5 101267234 101267307 -101818225 - L1ME4a LINE L1 -82 6039 5974 580 167 0 0 chr5 101267548 101267638 -101817894 + AluJ SINE Alu 200 289 -23 1461 126 133 42 chr5 101267639 101267925 -101817607 - AluSx SINE Alu 0 312 1 4283 126 21 3 chr5 101268110 101268764 -101816768 - L1PA16 LINE L1 -9 6157 5489 2176 122 20 0 chr5 101268764 101269068 -101816464 - AluSx SINE Alu -2 310 1 4283 126 21 3 chr5 101269068 101269088 -101816444 - L1PA16 LINE L1 -677 5489 5471 3252 82 18 2 chr5 101269515 101269968 -101815564 + L1PA13 LINE L1 5701 6160 -3 2026 131 3 16 chr5 101269968 101270281 -101815251 + AluSx SINE Alu 1 309 -3 2216 101 10 13 chr5 101270478 101270784 -101814748 - AluSx SINE Alu -7 305 1 24 0 0 0 chr5 101271389 101271413 -101814119 + AT_rich Low_complexity Low_complexity 1 24 0 1946 116 10 40 chr5 101271614 101271917 -101813615 - AluSq SINE Alu -19 294 1 477 282 153 0 chr5 101272693 101272856 -101812676 - MIR SINE MIR -24 238 51 290 292 135 82 chr5 101272914 101273181 -101812351 + L2 LINE L2 3023 3303 -10 2075 99 3 25 chr5 101273466 101273780 -101811752 + AluSp SINE Alu 1 307 -6 55 50 0 10 chr5 101274213 101274281 -101811251 + AT_rich Low_complexity Low_complexity 1 69 -31 2058 124 3 10 chr5 101274281 101274580 -101810952 - AluSg SINE Alu -13 297 1 55 50 0 10 chr5 101274580 101274612 -101810920 + AT_rich Low_complexity Low_complexity 69 100 0 343 227 128 21 chr5 101274672 101274813 -101810719 - L2 LINE L2 -825 2489 2334 797 258 166 3 chr5 101274877 101275203 -101810329 - L1MC4 LINE L1 -141 7901 7523 540 206 14 41 chr5 101275226 101275278 -101810254 + MER105 DNA DNA 6 58 -146 1460 208 47 98 chr5 101275278 101275826 -101809706 - MLT2B1 LTR ERVL 0 520 1 540 206 14 41 chr5 101275826 101275919 -101809613 + MER105 DNA DNA 58 147 -57 523 249 111 48 chr5 101275958 101276770 -101808762 - L1MC4 LINE L1 -569 7473 6459 1236 129 330 7 chr5 101277027 101277321 -101808211 - MER61B LTR ERV1 -36 389 1 272 340 121 56 chr5 101277465 101278112 -101807420 - L2 LINE L2 -1660 1654 966 2170 125 3 7 chr5 101278495 101278800 -101806732 + AluSx SINE Alu 1 304 -8 2294 97 0 38 chr5 101280116 101280435 -101805097 - AluSg SINE Alu -3 307 1 1749 177 19 35 chr5 101280514 101280882 -101804650 - MLT1A1 LTR MaLR 0 365 4 2053 131 0 0 chr5 101281476 101281785 -101803747 - AluSx SINE Alu 0 311 3 274 311 101 0 chr5 101282690 101282809 -101802723 + MIR SINE MIR 62 192 -70 34 0 0 0 chr5 101282963 101282997 -101802535 + AT_rich Low_complexity Low_complexity 1 34 0 684 175 35 0 chr5 101282997 101283111 -101802421 - FLAM_C SINE Alu -15 118 1 1201 276 59 24 chr5 101284205 101284683 -101800849 - L1MC4a LINE L1 -1785 6023 5520 1256 224 55 21 chr5 101284683 101284973 -101800559 + AluJo SINE Alu 1 300 -12 1201 276 59 24 chr5 101284973 101285073 -101800459 - L1MC4a LINE L1 -2288 5520 5425 287 255 0 51 chr5 101285152 101285250 -101800282 - L1MC4 LINE L1 -151 7891 7799 1139 103 73 44 chr5 101285259 101285383 -101800149 + MER2 DNA MER2_type 1 135 -210 1532 106 60 0 chr5 101285383 101285600 -101799932 + MER30 DNA MER1_type 1 230 0 1139 103 73 44 chr5 101285600 101285679 -101799853 + MER2 DNA MER2_type 135 210 -135 21 57 0 0 chr5 101285679 101285714 -101799818 + AT_rich Low_complexity Low_complexity 1 35 0 1731 242 44 12 chr5 101285779 101286284 -101799248 - L1MC4 LINE L1 -258 7784 7264 1544 269 24 29 chr5 101286322 101286620 -101798912 - L1MC4a LINE L1 -813 6995 6700 2092 126 33 0 chr5 101286620 101286922 -101798610 + AluSx SINE Alu 1 312 0 1544 269 24 29 chr5 101286922 101287177 -101798355 - L1MC4a LINE L1 -1108 6700 6445 557 244 44 58 chr5 101287570 101287795 -101797737 - L2 LINE L2 0 3313 3092 313 286 130 32 chr5 101288142 101288296 -101797236 - MIR SINE MIR -74 188 20 349 301 8 0 chr5 101289292 101289415 -101796117 + MER117 DNA MER1_type 40 163 -34 4548 134 69 36 chr5 101289615 101289690 -101795842 - MER6 DNA MER2_type 0 865 794 2009 119 11 3 chr5 101289690 101289975 -101795557 + AluSx SINE Alu 1 287 -25 4548 134 69 36 chr5 101289975 101290735 -101794797 - MER6 DNA MER2_type -71 794 2 288 187 37 32 chr5 101291107 101291217 -101794315 + MIR SINE MIR 106 262 0 289 206 0 27 chr5 101291312 101291385 -101794147 + L1MC4a LINE L1 5843 5913 -1895 2115 128 6 6 chr5 101291999 101292311 -101793221 - AluJb SINE Alu 0 312 1 610 333 106 16 chr5 101293203 101293372 -101792160 + HAL1 LINE L1 1128 1280 -1227 1983 160 0 0 chr5 101293372 101293679 -101791853 + AluJo SINE Alu 1 307 -5 610 333 106 16 chr5 101293679 101293897 -101791635 + HAL1 LINE L1 1280 1550 -957 766 208 20 61 chr5 101293920 101294117 -101791415 - MIR SINE MIR -51 211 23 336 297 42 17 chr5 101294613 101294852 -101790680 + L1ME LINE L1 4804 5048 -1098 1813 167 13 0 chr5 101295112 101295411 -101790121 + AluJo SINE Alu 1 303 -9 324 318 45 0 chr5 101295454 101295608 -101789924 + L1ME LINE L1 5387 5547 -617 232 255 181 16 chr5 101295648 101295836 -101789696 + L1ME LINE L1 5666 5884 -278 2402 115 0 0 chr5 101296085 101296398 -101789134 - AluSq SINE Alu 0 313 1 2290 92 7 3 chr5 101296770 101297075 -101788457 - AluSx SINE Alu -6 306 1 216 67 0 0 chr5 101297470 101297500 -101788032 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 234 0 0 0 chr5 101298034 101298060 -101787472 + (CA)n Simple_repeat Simple_repeat 2 27 0 * 309 26 0 0 chr5 101298059 101298097 -101787435 + (TC)n Simple_repeat Simple_repeat 2 39 0 921 296 25 3 chr5 101298593 101298914 -101786618 + MLT1I LTR MaLR 63 390 -19 26 0 0 0 chr5 101299759 101299785 -101785747 + AT_rich Low_complexity Low_complexity 1 26 0 3450 52 0 37 chr5 101300127 101300586 -101784946 + L1PA5 LINE L1 5713 6154 0 1787 156 24 6 chr5 101301103 101301442 -101784090 - L1PA16 LINE L1 -16 6150 5806 248 224 15 90 chr5 101301575 101301642 -101783890 + L2 LINE L2 3229 3290 -23 489 34 0 0 chr5 101301658 101301717 -101783815 + (CA)n Simple_repeat Simple_repeat 2 60 0 631 259 47 10 chr5 101301872 101302065 -101783467 - MIR SINE MIR -10 252 53 183 133 0 0 chr5 101302109 101302139 -101783393 - L2 LINE L2 0 3313 3284 492 312 41 38 chr5 101302209 101302475 -101783057 + L2 LINE L2 2217 2483 -831 530 299 132 51 chr5 101302503 101302974 -101782558 + L2 LINE L2 2805 3313 0 257 284 15 0 chr5 101303074 101303141 -101782391 + L2 LINE L2 3244 3311 -2 1684 186 3 36 chr5 101303335 101303641 -101781891 - AluJo SINE Alu -16 296 1 567 192 100 8 chr5 101303672 101303792 -101781740 + FLAM_C SINE Alu 3 133 -10 355 113 0 0 chr5 101303912 101303965 -101781567 - MER66B LTR ERV1 -140 346 294 2257 109 20 3 chr5 101304061 101304364 -101781168 - AluSx SINE Alu -4 308 1 1683 182 43 3 chr5 101304690 101305014 -101780518 + MER58B DNA MER1_type 1 337 -4 738 230 259 6 chr5 101305091 101305404 -101780128 + LTR16C LTR ERVL 100 491 0 1777 142 0 73 chr5 101306323 101306640 -101778892 + AluJb SINE Alu 1 294 -18 932 102 25 32 chr5 101306641 101306729 -101778803 + L1MA2 LINE L1 6148 6236 -68 2306 136 23 0 chr5 101306729 101307081 -101778451 - THE1B LTR MaLR -2 362 3 932 102 25 32 chr5 101307081 101307149 -101778383 + L1MA2 LINE L1 6236 6303 -1 211 213 0 0 chr5 101307406 101307453 -101778079 + GA-rich Low_complexity Low_complexity 3 49 0 617 261 106 9 chr5 101307453 101307671 -101777861 + MIR SINE MIR 20 258 -4 578 217 80 7 chr5 101307801 101307939 -101777593 - MLT1H1 LTR MaLR -405 150 3 303 297 68 40 chr5 101307946 101308094 -101777438 - MLT1H1-int LTR MaLR -5 1366 1215 911 208 0 12 chr5 101308276 101308444 -101777088 + FAM SINE Alu 1 166 -9 945 242 121 23 chr5 101308503 101309044 -101776488 + MLT1E2 LTR MaLR 1 616 -10 232 283 31 102 chr5 101309656 101309981 -101775551 - MLT1H1-int LTR MaLR -768 603 302 1635 280 35 18 chr5 101310159 101310306 -101775226 - MLT1H1 LTR MaLR 0 555 412 2268 88 0 3 chr5 101310306 101310614 -101774918 + AluY SINE Alu 1 307 0 1635 280 35 18 chr5 101310614 101311011 -101774521 - MLT1H1 LTR MaLR -143 412 1 414 253 45 81 chr5 101311230 101311428 -101774104 + MIR SINE MIR 18 208 -54 489 214 134 55 chr5 101311450 101311651 -101773881 + MER112 DNA MER1_type 28 244 -16 469 242 196 8 chr5 101311901 101312161 -101773371 + MER113 DNA MER1_type? 118 426 -95 649 231 16 71 chr5 101312421 101312483 -101773049 - MER5B DNA MER1_type -6 172 108 2344 62 0 33 chr5 101312483 101312789 -101772743 - AluY SINE Alu -15 296 1 649 231 16 71 chr5 101312789 101312908 -101772624 - MER5B DNA MER1_type -70 108 1 24 32 0 0 chr5 101313188 101313219 -101772313 + AT_rich Low_complexity Low_complexity 1 31 0 1995 91 4 0 chr5 101313222 101313475 -101772057 - AluSg SINE Alu -48 262 9 1607 126 57 68 chr5 101313696 101314062 -101771470 + THE1C LTR MaLR 14 375 0 435 264 164 0 chr5 101314485 101314644 -101770888 + MER69 DNA AcHobo 365 549 -1977 * 887 223 18 19 chr5 101314643 101315025 -101770507 + MER69 DNA AcHobo 2022 2459 -67 2037 148 26 8 chr5 101317236 101317614 -101767918 - MLT1B LTR MaLR -5 385 1 575 246 15 8 chr5 101318273 101318403 -101767129 + FLAM_C SINE Alu 1 131 -12 1667 150 93 32 chr5 101319159 101319439 -101766093 + AluSx SINE Alu 1 297 -15 496 243 41 96 chr5 101320080 101320298 -101765234 + LTR67 LTR ERVL 29 234 -323 611 190 118 24 chr5 101320549 101320760 -101764772 - L1ME1 LINE L1 -18 6148 5918 234 109 16 125 chr5 101320818 101320839 -101764693 + LTR67 LTR ERVL 482 504 -53 664 262 48 28 chr5 101320839 101321091 -101764441 - MIR SINE MIR -2 260 4 234 109 16 125 chr5 101321091 101321133 -101764399 + LTR67 LTR ERVL 504 538 -19 202 277 152 82 chr5 101321413 101321690 -101763842 - L2 LINE L2 -251 3062 2780 235 389 28 19 chr5 101322131 101322239 -101763293 - MIR SINE MIR -66 142 34 885 235 11 11 chr5 101324161 101324336 -101761196 - MER5A DNA MER1_type 0 189 15 2475 88 0 0 chr5 101324336 101324642 -101760890 - AluY SINE Alu -5 306 1 1741 153 3 68 chr5 101324642 101324963 -101760569 - AluJb SINE Alu -12 300 1 894 113 75 6 chr5 101324988 101325147 -101760385 + MER4A LTR ERV1 1 170 -494 1907 128 0 14 chr5 101325164 101325461 -101760071 + MER4A LTR ERV1 372 664 0 25 0 0 0 chr5 101325613 101325638 -101759894 + GC_rich Low_complexity Low_complexity 1 25 0 12990 119 21 4 chr5 101325935 101327885 -101757647 - HUERS-P3 LTR ERV1 -2817 6102 4120 2870 93 39 11 chr5 101328132 101328572 -101756960 + L1PB1 LINE L1 5700 6151 0 1995 198 37 9 chr5 101328745 101329199 -101756333 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 101329391 101329413 -101756119 + AT_rich Low_complexity Low_complexity 1 22 0 444 228 29 131 chr5 101329991 101330197 -101755335 - MER91B DNA MER1_type -4 186 2 758 159 31 18 chr5 101330580 101330743 -101754789 + MSTC LTR MaLR 9 173 -255 21 0 0 0 chr5 101331048 101331069 -101754463 + AT_rich Low_complexity Low_complexity 1 21 0 1032 261 109 12 chr5 101331258 101331781 -101753751 - MLT1G1 LTR MaLR 0 595 3 420 322 23 6 chr5 101332744 101332921 -101752611 - MLT1-int LTR MaLR -795 576 397 259 347 27 7 chr5 101333004 101333151 -101752381 - MLT1-int LTR MaLR -1221 150 1 673 254 188 12 chr5 101333292 101333611 -101751921 - MLT1G1 LTR MaLR -220 375 1 1430 83 23 5 chr5 101333635 101333851 -101751681 + L1MA5A LINE L1 6077 6296 -1 214 315 177 23 chr5 101334388 101334518 -101751014 + L2 LINE L2 3119 3268 -4 21 36 0 0 chr5 101335025 101335053 -101750479 + AT_rich Low_complexity Low_complexity 1 28 0 243 182 23 0 chr5 101335056 101335100 -101750432 + MLT1F LTR MaLR 1 45 -497 1647 235 80 20 chr5 101335113 101335616 -101749916 + MLT1F LTR MaLR 10 542 0 221 179 0 0 chr5 101336869 101336908 -101748624 - L2 LINE L2 -12 3260 3222 763 146 0 0 chr5 101336995 101337118 -101748414 - L1MB3 LINE L1 -7 6176 6054 504 283 82 13 chr5 101337622 101337781 -101747751 - MIR SINE MIR -77 185 16 452 278 52 25 chr5 101338001 101338211 -101747321 - MER91B DNA MER1_type -6 190 1 1781 163 30 50 chr5 101338240 101338638 -101746894 + MLT1B LTR MaLR 1 390 0 217 222 0 32 chr5 101338712 101338775 -101746757 + (CA)n Simple_repeat Simple_repeat 2 62 0 200 286 0 0 chr5 101338787 101338836 -101746696 + GA-rich Low_complexity Low_complexity 2 50 0 26 30 0 0 chr5 101338886 101338919 -101746613 + AT_rich Low_complexity Low_complexity 1 33 0 2105 112 24 0 chr5 101338919 101339206 -101746326 - AluSx SINE Alu -18 294 1 355 261 162 7 chr5 101339285 101339427 -101746105 + L2 LINE L2 3150 3313 0 444 217 56 50 chr5 101340061 101340222 -101745310 - MIR SINE MIR -23 239 78 363 271 29 18 chr5 101340248 101340418 -101745114 - L1ME4a LINE L1 0 6121 5950 2083 104 67 6 chr5 101340445 101340772 -101744760 + MER7A DNA MER2_type 1 345 -1 24 0 0 0 chr5 101340867 101340891 -101744641 + AT_rich Low_complexity Low_complexity 1 24 0 15295 176 17 34 chr5 101340954 101341787 -101743745 + L1PA14 LINE L1 2257 3102 -3059 1744 132 23 0 chr5 101341787 101342044 -101743488 + AluSq SINE Alu 11 273 -40 15295 176 17 34 chr5 101342044 101344280 -101741252 + L1PA14 LINE L1 3102 5373 -788 2524 63 0 0 chr5 101344280 101344579 -101740953 + AluY SINE Alu 1 299 -12 15295 176 17 34 chr5 101344579 101344655 -101740877 + L1PA14 LINE L1 5373 5449 -712 2292 105 0 9 chr5 101344655 101344970 -101740562 + AluSx SINE Alu 1 312 0 15295 176 17 34 chr5 101344970 101345737 -101739795 + L1PA14 LINE L1 5449 6155 -6 2167 113 7 0 chr5 101345840 101346131 -101739401 - AluSx SINE Alu -17 295 3 373 211 10 10 chr5 101346448 101346552 -101738980 + CT-rich Low_complexity Low_complexity 2 105 0 2227 99 0 3 chr5 101347038 101347330 -101738202 - AluSx SINE Alu -21 291 1 23 33 0 0 chr5 101348219 101348249 -101737283 + AT_rich Low_complexity Low_complexity 1 30 0 684 124 62 18 chr5 101348250 101348363 -101737169 - FLAM_C SINE Alu -20 123 6 29 78 0 0 chr5 101348420 101348484 -101737048 + AT_rich Low_complexity Low_complexity 1 64 0 320 266 191 27 chr5 101349122 101349310 -101736222 - L2 LINE L2 -786 2528 2310 207 0 0 0 chr5 101349444 101349467 -101736065 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 236 204 41 0 chr5 101350019 101350068 -101735464 + L3b LINE CR1 1299 1349 -234 188 325 12 12 chr5 101350138 101350218 -101735314 + L3b LINE CR1 1348 1427 -156 333 234 19 65 chr5 101351401 101351508 -101734024 - MIR SINE MIR -9 253 152 961 240 49 0 chr5 101351803 101352028 -101733504 + MIR SINE MIR 16 251 -11 279 293 43 14 chr5 101357745 101357885 -101727647 + L1ME3 LINE L1 5423 5566 -596 373 226 88 29 chr5 101357985 101358087 -101727445 - MER81 DNA DNA -5 109 2 512 289 99 41 chr5 101358186 101358528 -101727004 + L1ME3 LINE L1 5536 5897 -265 28 61 0 0 chr5 101358761 101358810 -101726722 + AT_rich Low_complexity Low_complexity 1 49 0 266 276 86 98 chr5 101358886 101359060 -101726472 - L2 LINE L2 -6 3307 3136 1931 158 3 3 chr5 101359102 101359400 -101726132 + AluSx SINE Alu 3 300 -12 349 256 107 36 chr5 101359432 101359600 -101725932 - L2 LINE L2 -189 3124 2945 2334 71 0 3 chr5 101359879 101360225 -101725307 + AluY SINE Alu 2 346 0 1532 318 125 17 chr5 101360431 101360832 -101724700 + L2 LINE L2 2239 2595 -718 4836 193 47 81 chr5 101360832 101362333 -101723199 + Charlie1a DNA MER1_type 5 1455 0 1532 318 125 17 chr5 101362333 101362889 -101722643 + L2 LINE L2 2595 3311 -2 397 263 91 86 chr5 101363770 101363893 -101721639 - MIR SINE MIR -10 252 126 2312 105 0 0 chr5 101363893 101364189 -101721343 + AluSx SINE Alu 3 298 -14 397 263 91 86 chr5 101364189 101364297 -101721235 - MIR SINE MIR -136 126 20 302 324 164 16 chr5 101365517 101365761 -101719771 + L3 LINE CR1 953 1232 -345 752 287 117 35 chr5 101367159 101367616 -101717916 + MLT1H1 LTR MaLR 65 555 0 264 358 117 30 chr5 101368204 101368503 -101717029 + L2 LINE L2 2858 3182 -131 238 322 14 103 chr5 101368609 101368755 -101716777 + L2 LINE L2 3179 3311 -2 25 0 0 0 chr5 101369046 101369071 -101716461 + AT_rich Low_complexity Low_complexity 1 25 0 288 265 32 37 chr5 101369353 101369482 -101716050 + MLT1I LTR MaLR 20 148 -261 204 333 9 54 chr5 101371459 101371570 -101713962 - MIR3 SINE MIR -3 205 100 195 239 22 0 chr5 101371667 101371713 -101713819 + L2 LINE L2 3267 3313 0 1666 170 32 29 chr5 101371817 101372128 -101713404 - AluJb SINE Alu 0 312 1 1202 158 143 66 chr5 101373714 101374000 -101711532 + AluJo SINE Alu 6 311 0 1177 194 104 123 chr5 101374908 101375388 -101710144 - MLT1D LTR MaLR 0 505 35 209 325 42 67 chr5 101375627 101375747 -101709785 - MER91A DNA MER1_type -12 184 68 2141 136 45 0 chr5 101376593 101376925 -101708607 - MER7A DNA MER2_type 0 346 2 469 307 38 51 chr5 101377142 101377455 -101708077 - MLT1K LTR MaLR -3 585 277 419 224 103 0 chr5 101377633 101377740 -101707792 - MER96B DNA MER1_type? -2 415 298 364 383 74 9 chr5 101378941 101379171 -101706361 - MIR SINE MIR -17 245 1 2128 122 0 0 chr5 101379337 101379632 -101705900 - AluSx SINE Alu -16 296 2 186 288 96 14 chr5 101379989 101380062 -101705470 + L2 LINE L2 1351 1429 -1885 688 205 154 6 chr5 101381665 101381821 -101703711 + MER5A DNA MER1_type 9 187 -2 317 266 156 0 chr5 101384113 101384222 -101701310 - L2 LINE L2 0 3313 3188 348 193 80 0 chr5 101384224 101384312 -101701220 - MIR SINE MIR 0 262 168 414 0 0 0 chr5 101384508 101384554 -101700978 + (CA)n Simple_repeat Simple_repeat 1 46 0 378 348 6 22 chr5 101384713 101384891 -101700641 + MER5A DNA MER1_type 13 187 -2 465 305 46 64 chr5 101385355 101385637 -101699895 - MLT1I LTR MaLR -2 407 131 292 290 86 0 chr5 101386152 101386245 -101699287 - L2 LINE L2 -37 3276 3176 * 295 302 62 0 chr5 101386240 101386336 -101699196 - MIR SINE MIR 0 262 161 249 206 96 0 chr5 101386434 101386507 -101699025 - MER116 DNA Mariner 0 80 1 869 146 7 28 chr5 101386647 101386791 -101698741 - MLT1D LTR MaLR -364 141 1 320 364 30 6 chr5 101386800 101386965 -101698567 - MIR SINE MIR -87 175 7 2346 78 3 0 chr5 101387189 101387485 -101698047 - AluY SINE Alu -11 300 4 1869 168 0 3 chr5 101387626 101387924 -101697608 - AluSx SINE Alu -15 297 1 201 250 23 23 chr5 101387937 101388025 -101697507 + (TA)n Simple_repeat Simple_repeat 1 88 0 2291 101 3 0 chr5 101388442 101388738 -101696794 - AluSq SINE Alu -16 297 1 213 350 105 31 chr5 101388779 101388977 -101696555 - L2 LINE L2 -597 2717 2494 852 34 188 0 chr5 101388977 101389094 -101696438 + MER85 DNA T2_type 1 139 0 213 350 105 31 chr5 101389094 101389152 -101696380 - L2 LINE L2 -820 2494 2442 536 292 93 18 chr5 101390561 101391025 -101694507 - L1ME4a LINE L1 -293 5828 5333 290 34 0 0 chr5 101391087 101391126 -101694406 + L1PA5 LINE L1 6107 6146 -9 316 214 119 12 chr5 101391126 101391210 -101694322 - L1MC4 LINE L1 -1340 6702 6610 492 347 27 0 chr5 101392966 101393116 -101692416 - L2 LINE L2 -3 3269 3116 4282 158 37 14 chr5 101393221 101394181 -101691351 - L1MA8 LINE L1 -181 6110 5127 376 318 133 9 chr5 101394249 101394474 -101691058 - MIR SINE MIR -6 256 1 23 0 0 0 chr5 101394851 101394874 -101690658 + AT_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 101395993 101396017 -101689515 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 281 195 0 26 chr5 101396292 101396369 -101689163 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 25 0 0 0 chr5 101396453 101396478 -101689054 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 101396587 101396609 -101688923 + AT_rich Low_complexity Low_complexity 1 22 0 1200 287 103 32 chr5 101397377 101397970 -101687562 - L2 LINE L2 -7 3306 2677 1029 301 119 23 chr5 101398221 101398606 -101686926 - MER115 DNA AcHobo 0 693 272 434 330 91 26 chr5 101398606 101398836 -101686696 + LTR16A LTR ERVL 1 245 -205 2026 111 0 21 chr5 101399263 101399583 -101685949 - AluSx SINE Alu 0 314 1 527 280 61 67 chr5 101399735 101400375 -101685157 + L1ME3A LINE L1 4349 4984 -1162 466 104 0 0 chr5 101400400 101400467 -101685065 + AluSg SINE Alu 1 67 -242 1777 98 0 0 chr5 101400533 101400767 -101684765 + AluSg SINE Alu 75 308 -2 349 304 46 36 chr5 101400810 101401004 -101684528 + L1ME3A LINE L1 5078 5273 -873 963 255 67 88 chr5 101401011 101401681 -101683851 + L1ME3A LINE L1 5296 5951 -219 250 330 64 64 chr5 101401961 101402149 -101683383 - MLT1J LTR MaLR -100 411 224 334 275 29 76 chr5 101402370 101402488 -101683044 - HAL1 LINE L1 -809 1698 1589 2664 56 0 0 chr5 101402488 101402827 -101682705 + L1PA13 LINE L1 5824 6162 -1 334 275 29 76 chr5 101402827 101402879 -101682653 - HAL1 LINE L1 -918 1589 1536 21 36 0 0 chr5 101403049 101403077 -101682455 + AT_rich Low_complexity Low_complexity 1 28 0 336 353 62 47 chr5 101403180 101403438 -101682094 - L1MEd LINE L1 -4938 1181 920 329 304 44 62 chr5 101403493 101403766 -101681766 - HAL1 LINE L1 -1429 1078 811 2208 90 0 35 chr5 101404222 101404532 -101681000 + AluSg SINE Alu 1 299 -11 1977 233 44 41 chr5 101404613 101405201 -101680331 - HsTC2a DNA Tc2 -151 593 4 1244 176 109 35 chr5 101407674 101407958 -101677574 - AluJo SINE Alu -7 305 1 314 342 65 33 chr5 101408732 101408916 -101676616 + L2 LINE L2 2838 3027 -245 305 254 0 0 chr5 101409021 101409084 -101676448 + L2 LINE L2 3210 3272 0 2192 118 30 35 chr5 101409097 101409463 -101676069 - THE1B LTR MaLR 0 364 1 1024 326 72 40 chr5 101410628 101411125 -101674407 + MLT1K LTR MaLR 66 578 -10 259 242 0 15 chr5 101411123 101411189 -101674343 + MLT1K LTR MaLR 521 585 -3 * 1909 115 15 0 chr5 101411346 101411616 -101673916 + AluSx SINE Alu 3 276 -36 2179 116 0 0 chr5 101411616 101411907 -101673625 + AluSc SINE Alu 4 295 -14 181 333 0 23 chr5 101413129 101413216 -101672316 + L2 LINE L2 2911 2995 -277 220 231 90 64 chr5 101414643 101414721 -101670811 + L2 LINE L2 3234 3313 0 237 132 0 0 chr5 101415337 101415375 -101670157 + (TA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 101416155 101416176 -101669356 + AT_rich Low_complexity Low_complexity 1 21 0 364 311 121 0 chr5 101416532 101416664 -101668868 + L2 LINE L2 3116 3263 -9 * 1064 237 18 0 chr5 101416647 101416866 -101668666 - MIR SINE MIR -6 256 34 328 292 134 12 chr5 101417014 101417089 -101668443 - MIR SINE MIR -5 257 193 321 26 0 0 chr5 101417089 101417127 -101668405 + (TG)n Simple_repeat Simple_repeat 1 38 0 328 292 134 12 chr5 101417127 101417183 -101668349 - MIR SINE MIR -69 193 145 2327 97 0 0 chr5 101417183 101417482 -101668050 + AluSx SINE Alu 1 299 -13 328 292 134 12 chr5 101417482 101417558 -101667974 - MIR SINE MIR -117 145 21 207 0 0 0 chr5 101418523 101418546 -101666986 + (CA)n Simple_repeat Simple_repeat 1 23 0 477 160 59 42 chr5 101418657 101418776 -101666756 - L1MB4 LINE L1 -1 6179 6059 2695 155 43 75 chr5 101418874 101419008 -101666524 - L1MB4 LINE L1 -118 6062 5925 1224 272 28 25 chr5 101419008 101419372 -101666160 + MLT1A1 LTR MaLR 1 365 0 2695 155 43 75 chr5 101419372 101419596 -101665936 - L1MB4 LINE L1 -255 5925 5695 2571 117 5 8 chr5 101419596 101419972 -101665560 + THE1C LTR MaLR 1 375 0 2695 155 43 75 chr5 101419972 101420243 -101665289 - L1MB4 LINE L1 -485 5695 5452 270 0 0 0 chr5 101420671 101420701 -101664831 + (CA)n Simple_repeat Simple_repeat 2 31 0 297 252 108 36 chr5 101421899 101422038 -101663494 - MIR SINE MIR -50 212 64 272 281 0 0 chr5 101422966 101423030 -101662502 - L2 LINE L2 -2 3311 3248 1666 228 43 42 chr5 101423051 101423581 -101661951 - L1M4c LINE L1 -2140 4504 3974 342 98 0 0 chr5 101423597 101423648 -101661884 + (TCC)n Simple_repeat Simple_repeat 1 51 0 792 178 25 136 chr5 101423648 101423890 -101661642 - AluJo SINE Alu -11 301 87 3939 244 50 50 chr5 101423897 101424828 -101660704 - L1M4c LINE L1 -2704 3940 3010 2024 177 57 26 chr5 101424828 101425247 -101660285 - MSTB1 LTR MaLR 0 432 1 3939 244 50 50 chr5 101425247 101425477 -101660055 - L1M4c LINE L1 -3634 3010 2781 6841 67 6 7 chr5 101425477 101427062 -101658470 - L1PA7 LINE L1 0 6154 4571 3939 244 50 50 chr5 101427062 101428358 -101657174 - L1M4c LINE L1 -3863 2781 1371 1069 191 66 48 chr5 101428370 101428642 -101656890 - L1M4c LINE L1 -5346 1196 920 3486 194 9 23 chr5 101428644 101429426 -101656106 + L1 LINE L1 4160 4930 -1216 1664 166 11 55 chr5 101429458 101429820 -101655712 + L1PB4 LINE L1 3581 3926 -2220 * 2602 150 5 2 chr5 101429816 101430242 -101655290 - L1PBa LINE L1 -5043 1820 1394 2322 160 31 8 chr5 101430242 101430624 -101654908 - MSTB LTR MaLR -35 391 1 4612 159 11 12 chr5 101430624 101431450 -101654082 + L1PB4 LINE L1 5332 6156 0 833 159 95 19 chr5 101431463 101431703 -101653829 - MLT2B1 LTR ERVL -164 250 1 1839 164 3 3 chr5 101432622 101432926 -101652606 - AluJb SINE Alu -8 304 1 1866 186 54 77 chr5 101432979 101433421 -101652111 + MLT1C-int LTR MaLR 940 1371 0 1758 219 64 18 chr5 101433426 101433864 -101651668 + MLT1C LTR MaLR 6 463 -4 558 161 6 31 chr5 101434393 101434554 -101650978 + (TA)n Simple_repeat Simple_repeat 1 157 0 214 354 19 86 chr5 101434681 101434890 -101650642 + L2 LINE L2 2964 3158 -114 472 232 18 49 chr5 101434956 101435120 -101650412 - L1MA10 LINE L1 0 6334 6176 39982 73 6 5 chr5 101435195 101441342 -101644190 + L1PA5 LINE L1 1 6154 0 494 228 44 22 chr5 101441566 101441702 -101643830 + MER104 DNA Tc2 1 139 -41 2580 201 34 2 chr5 101442069 101442601 -101642931 + L1PB1 LINE L1 3 551 -6312 4023 129 21 5 chr5 101442625 101443789 -101641743 + L1PB1 LINE L1 607 1971 -4892 14661 198 11 8 chr5 101443803 101444109 -101641423 + L1PB1 LINE L1 2460 2763 -4104 2260 124 31 6 chr5 101444109 101444463 -101641069 - THE1B LTR MaLR -1 363 1 10073 105 38 41 chr5 101444463 101446048 -101639484 - THE1B-int LTR MaLR 0 1580 1 2243 129 28 6 chr5 101446048 101446404 -101639128 - THE1B LTR MaLR 0 364 1 14661 198 11 8 chr5 101446404 101450487 -101635045 + L1PB1 LINE L1 2762 6866 -1 22 0 0 0 chr5 101450579 101450601 -101634931 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr5 101451424 101451465 -101634067 + AT_rich Low_complexity Low_complexity 1 41 0 897 270 87 40 chr5 101452321 101452747 -101632785 + MLT1J1 LTR MaLR 1 446 0 30 27 0 0 chr5 101453250 101453287 -101632245 + AT_rich Low_complexity Low_complexity 1 37 0 890 340 59 23 chr5 101453557 101454081 -101631451 - L2 LINE L2 -464 2850 2308 252 275 29 0 chr5 101454122 101454191 -101631341 - L2 LINE L2 -1001 2313 2243 204 284 37 37 chr5 101454190 101454271 -101631261 - MIR3 SINE MIR -17 191 111 * 799 126 0 15 chr5 101454467 101454602 -101630930 + FLAM_C SINE Alu 1 133 0 616 124 0 0 chr5 101455069 101455158 -101630374 - AluSg/x SINE Alu -23 287 199 2169 128 0 0 chr5 101455565 101455861 -101629671 + AluSx SINE Alu 1 296 -16 864 90 30 0 chr5 101455918 101456056 -101629476 - L1M2 LINE L1 -572 5582 5461 2343 102 26 8 chr5 101456057 101456409 -101629123 + L1P4 LINE L1 5307 5664 -499 1312 190 10 3 chr5 101456511 101456801 -101628731 - L1M2 LINE L1 -755 5391 5100 3212 141 11 11 chr5 101456802 101457369 -101628163 + L1PB3 LINE L1 5622 6188 0 333 200 42 0 chr5 101458071 101458166 -101627366 - L1MA8 LINE L1 -2 6289 6191 328 243 9 65 chr5 101458503 101458610 -101626922 - MER5A DNA MER1_type -69 120 20 456 256 55 24 chr5 101458643 101458807 -101626725 + L1ME3A LINE L1 5843 6011 -159 274 209 75 0 chr5 101459651 101459718 -101625814 - MER20B DNA MER1_type -5 214 143 266 250 24 24 chr5 101460848 101460932 -101624600 + CT-rich Low_complexity Low_complexity 1 84 0 30 27 0 0 chr5 101461234 101461271 -101624261 + AT_rich Low_complexity Low_complexity 1 37 0 2052 204 40 25 chr5 101462178 101462625 -101622907 + MER70A LTR ERVL 1 454 -18 356 214 12 24 chr5 101462716 101462800 -101622732 + AluJ/FLAM SINE Alu 1 83 -219 984 138 0 0 chr5 101462800 101462986 -101622546 + AluSq SINE Alu 139 324 0 1977 148 7 0 chr5 101463000 101463291 -101622241 + AluSx SINE Alu 3 295 -17 478 217 104 0 chr5 101463763 101463878 -101621654 - L1MC1 LINE L1 -2 6331 6205 238 292 76 76 chr5 101464360 101464531 -101621001 - MIR SINE MIR -2 260 90 444 313 28 44 chr5 101464602 101464784 -101620748 - MER20B DNA MER1_type -604 179 1 302 122 20 0 chr5 101464821 101464870 -101620662 - MSTD LTR MaLR -4 392 343 490 305 73 70 chr5 101464994 101465364 -101620168 + LTR67 LTR ERVL 1 371 -186 301 229 0 0 chr5 101465416 101465499 -101620033 - L1ME2 LINE L1 -5 6159 6077 708 190 25 85 chr5 101465523 101465723 -101619809 - MLT1E2 LTR MaLR -434 192 5 1699 230 109 36 chr5 101465727 101466081 -101619451 - L1MEc LINE L1 -3351 3590 3263 1464 178 3 48 chr5 101466081 101466374 -101619158 - AluJb SINE Alu -9 303 24 1699 230 109 36 chr5 101466374 101466658 -101618874 - L1MEc LINE L1 -3678 3263 2905 1356 186 19 40 chr5 101466670 101466992 -101618540 - L1MC1 LINE L1 -3 6330 6016 576 126 0 0 chr5 101466995 101467082 -101618450 - L1MC1 LINE L1 -806 5527 5441 866 178 0 0 chr5 101467083 101467229 -101618303 - AluJb SINE Alu -8 304 159 15331 151 53 50 chr5 101467278 101470313 -101615219 - MER57B-int LTR ERV1 -1329 6208 3160 1539 121 0 31 chr5 101470313 101470536 -101614996 + AluSg/x SINE Alu 89 304 -8 15331 151 53 50 chr5 101470536 101470918 -101614614 - MER57B-int LTR ERV1 -4377 3160 2781 732 138 0 32 chr5 101470914 101471037 -101614495 - MER57B-int LTR ERV1 -4908 2629 2511 * 4377 152 41 18 chr5 101471039 101471881 -101613651 - MER57B-int LTR ERV1 -4377 1452 639 * 6160 116 52 2 chr5 101471873 101472793 -101612739 - MER57B-int LTR ERV1 -6570 967 2 2602 144 16 2 chr5 101472794 101473218 -101612314 - MER57B LTR ERV1 0 434 5 1227 211 15 88 chr5 101473237 101473705 -101611827 - L1MEc LINE L1 -5248 1874 1441 940 267 27 27 chr5 101473706 101474036 -101611496 - L1MEc LINE L1 -5590 1532 1203 492 226 77 5 chr5 101474103 101474298 -101611234 - L1M4 LINE L1 -2658 3488 3280 546 326 94 30 chr5 101474348 101474786 -101610746 - L1MEc LINE L1 -5920 503 38 1984 115 37 57 chr5 101475020 101475403 -101610129 + THE1C LTR MaLR 1 375 0 750 311 57 13 chr5 101476571 101476997 -101608535 + LTR33 LTR ERVL 1 515 -6 297 426 50 8 chr5 101477613 101477855 -101607677 + L2 LINE L2 3016 3267 -5 279 314 50 16 chr5 101477848 101477969 -101607563 - MIR SINE MIR -137 125 1 * 181 250 0 0 chr5 101479100 101479136 -101606396 - MIR3 SINE MIR -5 203 168 245 97 97 0 chr5 101479620 101479723 -101605809 + (TA)n Simple_repeat Simple_repeat 1 113 0 1629 216 13 0 chr5 101479910 101480211 -101605321 - AluJo SINE Alu -7 305 1 924 255 19 11 chr5 101480234 101480550 -101604982 + MLT1A1 LTR MaLR 1 365 0 298 296 77 51 chr5 101481354 101481550 -101603982 + MLT1I LTR MaLR 177 377 -32 1845 175 71 29 chr5 101481574 101482107 -101603425 - MLT2A2 LTR ERVL -2 552 1 1245 137 100 7 chr5 101482155 101482425 -101603107 + L1MA7 LINE L1 5996 6290 -1 556 125 23 0 chr5 101482943 101483031 -101602501 - L1PA16 LINE L1 -200 5966 5877 411 56 0 0 chr5 101483031 101483085 -101602447 + L1PA16 LINE L1 6104 6157 -9 24 0 0 0 chr5 101486962 101486986 -101598546 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 101487081 101487103 -101598429 + AT_rich Low_complexity Low_complexity 1 22 0 273 228 18 0 chr5 101488055 101488112 -101597420 - MIR SINE MIR -101 107 50 237 211 0 0 chr5 101488265 101488317 -101597215 + GA-rich Low_complexity Low_complexity 2 53 0 234 0 0 0 chr5 101488320 101488346 -101597186 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr5 101490561 101490582 -101594950 + AT_rich Low_complexity Low_complexity 1 21 0 195 268 24 0 chr5 101491540 101491581 -101593951 + L2 LINE L2 3137 3178 -94 2028 123 166 0 chr5 101492534 101492901 -101592631 - MSTA LTR MaLR 0 428 1 294 296 21 81 chr5 101493490 101493705 -101591827 - MIR SINE MIR -31 231 32 2502 114 8 16 chr5 101493917 101494295 -101591237 - THE1C LTR MaLR 0 375 1 24 67 0 0 chr5 101494450 101494495 -101591037 + AT_rich Low_complexity Low_complexity 1 45 0 878 285 58 10 chr5 101494814 101495126 -101590406 - L2 LINE L2 0 3313 2987 22 70 0 0 chr5 101496529 101496572 -101588960 + AT_rich Low_complexity Low_complexity 1 43 0 10861 200 42 32 chr5 101497173 101497654 -101587878 - L1MC3 LINE L1 0 7785 7310 1193 167 182 37 chr5 101497654 101497978 -101587554 + MER93b LTR ERV1 1 371 -2 10861 200 42 32 chr5 101497978 101498154 -101587378 - L1MC3 LINE L1 -475 7310 7137 6760 38 7 0 chr5 101498154 101498971 -101586561 + L1PA6 LINE L1 5313 6135 -19 486 0 0 0 chr5 101498971 101499025 -101586507 + (TA)n Simple_repeat Simple_repeat 1 54 0 10861 200 42 32 chr5 101499025 101500298 -101585234 - L1MC3 LINE L1 -648 7137 5878 2891 98 12 9 chr5 101500298 101500718 -101584814 + L1PA12 LINE L1 5746 6166 -2 10861 200 42 32 chr5 101500718 101501978 -101583554 - L1MC3 LINE L1 -1907 5878 4547 4252 141 29 1 chr5 101501978 101502660 -101582872 + L1PA15 LINE L1 5465 6165 0 10861 200 42 32 chr5 101502660 101503270 -101582262 - L1MC3 LINE L1 -3238 4547 3944 1262 297 104 7 chr5 101503315 101503766 -101581766 - L1MCb LINE L1 -5484 561 67 1852 182 45 8 chr5 101503890 101504242 -101581290 + MLT1A1 LTR MaLR 1 365 0 233 275 0 29 chr5 101504746 101504815 -101580717 - MLT1J LTR MaLR -420 91 25 755 244 54 49 chr5 101505510 101505715 -101579817 - MER63A DNA MER1_type 0 210 5 21 57 0 0 chr5 101505969 101506004 -101579528 + AT_rich Low_complexity Low_complexity 1 35 0 1366 205 48 51 chr5 101506009 101506384 -101579148 + MLT1A2 LTR MaLR 1 374 0 283 336 10 0 chr5 101507369 101507473 -101578059 - L2 LINE L2 -234 3038 2934 1027 193 45 130 chr5 101508433 101508832 -101576700 + MLT1A1 LTR MaLR 1 365 0 22 56 0 0 chr5 101510879 101510915 -101574617 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 101511263 101511287 -101574245 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 101512170 101512199 -101573333 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 101512336 101512358 -101573174 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 101512497 101512518 -101573014 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2062 96 6 13 chr5 101513087 101513400 -101572132 + L1MA1 LINE L1 5988 6298 -4 21 36 0 0 chr5 101513400 101513428 -101572104 + AT_rich Low_complexity Low_complexity 1 28 0 29 78 0 0 chr5 101515569 101515633 -101569899 + AT_rich Low_complexity Low_complexity 1 64 0 371 21 21 0 chr5 101516544 101516592 -101568940 + (CAT)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 101518515 101518536 -101566996 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr5 101520624 101520645 -101564887 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 101520769 101520790 -101564742 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr5 101521716 101521768 -101563764 + AT_rich Low_complexity Low_complexity 1 52 0 235 203 8 29 chr5 101522059 101522192 -101563340 + GA-rich Low_complexity Low_complexity 1 130 0 24 32 0 0 chr5 101524582 101524613 -101560919 + AT_rich Low_complexity Low_complexity 1 31 0 307 354 21 0 chr5 101524963 101525059 -101560473 + L2 LINE L2 3170 3267 -5 189 341 85 12 chr5 101525333 101525415 -101560117 + L2 LINE L2 3213 3300 -13 255 79 0 0 chr5 101526216 101526254 -101559278 + (TG)n Simple_repeat Simple_repeat 1 38 0 931 188 151 0 chr5 101526373 101526591 -101558941 + MLT1D LTR MaLR 248 498 -7 1234 157 29 29 chr5 101526599 101526841 -101558691 - MLT1D LTR MaLR -263 242 1 225 252 145 23 chr5 101527298 101527429 -101558103 + HAL1b LINE L1 1200 1346 -2 23 0 0 0 chr5 101527430 101527453 -101558079 + AT_rich Low_complexity Low_complexity 1 23 0 674 116 11 0 chr5 101527570 101527665 -101557867 - MER44D DNA MER2_type 0 705 610 275 269 0 64 chr5 101527663 101527741 -101557791 - MER7A DNA MER2_type -274 74 2 * 26 88 0 0 chr5 101527917 101527985 -101557547 + AT_rich Low_complexity Low_complexity 1 68 0 194 286 18 0 chr5 101529002 101529058 -101556474 + L2 LINE L2 3257 3313 0 364 239 68 0 chr5 101529466 101529554 -101555978 + L2 LINE L2 3199 3292 -21 2237 92 17 0 chr5 101530231 101530524 -101555008 + AluY SINE Alu 1 298 -13 4289 151 17 3 chr5 101530729 101531430 -101554102 + MER50 LTR ERV1 1 711 -23 770 322 111 16 chr5 101531433 101531858 -101553674 + LTR16C LTR ERVL 21 485 -6 33 43 0 0 chr5 101532381 101532428 -101553104 + AT_rich Low_complexity Low_complexity 1 47 0 2887 306 106 68 chr5 101532580 101534563 -101550969 + L1PB4 LINE L1 3 2137 -4725 1327 218 7 20 chr5 101534563 101534857 -101550675 + AluJo SINE Alu 1 290 -22 2887 306 106 68 chr5 101534857 101535806 -101549726 + L1PB4 LINE L1 2137 3049 -3813 7896 177 28 23 chr5 101535808 101537526 -101548006 + L1PB4 LINE L1 4245 5969 -903 1837 136 7 30 chr5 101537526 101537821 -101547711 + AluSx SINE Alu 1 288 -24 7896 177 28 23 chr5 101537821 101538665 -101546867 + L1PB4 LINE L1 5969 6808 -64 4211 59 28 41 chr5 101538666 101539279 -101546253 + MER11A LTR ERVK 1 605 -661 1431 106 18 14 chr5 101539379 101539596 -101545936 + MER11A LTR ERVK 1049 1266 0 288 79 0 0 chr5 101539644 101539682 -101545850 + L1PA16 LINE L1 6101 6138 -28 265 300 50 50 chr5 101539979 101540099 -101545433 + MER5A DNA MER1_type 17 136 -53 372 173 27 27 chr5 101540239 101540349 -101545183 - L1M4 LINE L1 -3199 2947 2838 21 57 0 0 chr5 101541154 101541189 -101544343 + AT_rich Low_complexity Low_complexity 1 35 0 253 304 95 53 chr5 101541287 101541530 -101544002 + HAL1 LINE L1 2251 2503 -4 188 65 0 32 chr5 101541772 101541803 -101543729 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1772 166 0 3 chr5 101541984 101542280 -101543252 - AluJb SINE Alu -17 295 1 314 61 20 0 chr5 101542429 101542478 -101543054 + (GA)n Simple_repeat Simple_repeat 2 51 0 239 143 0 41 chr5 101542655 101542704 -101542828 + L1MA7 LINE L1 6184 6230 -61 1022 271 134 35 chr5 101543196 101543650 -101541882 + LTR33 LTR ERVL 22 520 -1 21 0 0 0 chr5 101544612 101544633 -101540899 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr5 101545393 101545431 -101540101 + AT_rich Low_complexity Low_complexity 1 38 0 278 333 91 15 chr5 101545742 101545874 -101539658 - L2 LINE L2 -5 3267 3126 220 143 143 0 chr5 101546443 101546492 -101539040 - L2 LINE L2 0 3272 3217 334 284 71 60 chr5 101547002 101547185 -101538347 - L2 LINE L2 -460 2854 2670 1543 173 30 24 chr5 101548826 101549121 -101536411 + AluJb SINE Alu 4 300 -12 598 164 9 60 chr5 101549177 101549293 -101536239 + MLT1A2 LTR MaLR 1 110 -264 314 288 61 49 chr5 101551838 101552001 -101533531 - HAL1b LINE L1 -1032 316 152 302 277 76 17 chr5 101552076 101552195 -101533337 - L1ME1 LINE L1 -34 6132 6007 23 0 0 0 chr5 101552726 101552749 -101532783 + AT_rich Low_complexity Low_complexity 1 23 0 225 94 0 0 chr5 101552988 101553020 -101532512 + (T)n Simple_repeat Simple_repeat 1 32 0 10025 146 8 12 chr5 101553031 101554207 -101531325 - L1PA11 LINE L1 0 6174 4995 2342 84 0 13 chr5 101554207 101554518 -101531014 - AluY SINE Alu -3 308 2 10025 146 8 12 chr5 101554518 101555892 -101529640 - L1PA11 LINE L1 -1179 4995 3640 1759 181 9 9 chr5 101555993 101556336 -101529196 - L1PA11 LINE L1 -2477 3669 3327 545 106 39 34 chr5 101557805 101557984 -101527548 + (TA)n Simple_repeat Simple_repeat 1 180 0 1922 117 46 0 chr5 101559131 101559456 -101526076 + L1MA2 LINE L1 5965 6304 0 642 234 60 0 chr5 101559733 101559900 -101525632 - MER45A DNA AcHobo -1 177 1 197 274 0 0 chr5 101560972 101561023 -101524509 - MIR SINE MIR -76 132 82 181 308 128 26 chr5 101561934 101562051 -101523481 - L2 LINE L2 -5 3308 3180 216 345 62 18 chr5 101563483 101563596 -101521936 - L2 LINE L2 -1 3312 3195 1220 201 229 101 chr5 101564312 101564859 -101520673 + MLT1E1 LTR MaLR 1 617 -7 887 225 42 135 chr5 101566291 101566356 -101519176 - MLT1A1 LTR MaLR -2 363 294 1658 103 8 0 chr5 101566356 101566598 -101518934 - L1PB1 LINE L1 -2 6149 5906 887 225 42 135 chr5 101566598 101566932 -101518600 - MLT1A1 LTR MaLR -71 294 1 1878 137 153 24 chr5 101567926 101568305 -101517227 - MSTA LTR MaLR 0 428 1 8338 151 43 36 chr5 101568305 101569865 -101515667 - MSTA-int LTR MaLR -8 1572 3 1768 143 178 22 chr5 101569867 101570237 -101515295 - MSTA LTR MaLR 0 428 1 2482 124 6 0 chr5 101570391 101570753 -101514779 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr5 101570803 101570832 -101514700 + AT_rich Low_complexity Low_complexity 1 29 0 523 314 89 48 chr5 101570858 101571272 -101514260 + L3 LINE CR1 564 994 -583 23 0 0 0 chr5 101571417 101571440 -101514092 + AT_rich Low_complexity Low_complexity 1 23 0 513 32 0 0 chr5 101571596 101571659 -101513873 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1980 144 105 13 chr5 101571659 101572048 -101513484 - MSTA LTR MaLR -3 425 1 234 205 36 36 chr5 101572312 101572395 -101513137 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 205 255 88 49 chr5 101572729 101572831 -101512701 + L3 LINE CR1 1278 1383 -194 3608 225 15 1 chr5 101572892 101573781 -101511751 - L1PB1 LINE L1 -966 5180 4280 5702 113 12 1 chr5 101573788 101574741 -101510791 + L1PB1 LINE L1 5187 6149 -2 25 0 0 0 chr5 101574741 101574766 -101510766 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr5 101575727 101575759 -101509773 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 101575906 101575931 -101509601 + AT_rich Low_complexity Low_complexity 1 25 0 1850 132 76 20 chr5 101576901 101577243 -101508289 - THE1B LTR MaLR -1 363 3 11029 98 15 9 chr5 101577245 101578816 -101506716 - THE1B-int LTR MaLR 0 1580 1 2088 133 51 20 chr5 101578816 101579169 -101506363 - THE1B LTR MaLR 0 364 1 23 54 0 0 chr5 101579736 101579773 -101505759 + AT_rich Low_complexity Low_complexity 1 37 0 741 129 27 7 chr5 101580057 101580204 -101505328 + CT-rich Low_complexity Low_complexity 1 150 0 1954 148 37 28 chr5 101580392 101580744 -101504788 - THE1B LTR MaLR -1 363 9 480 343 76 25 chr5 101581622 101581886 -101503646 - L2 LINE L2 -217 3055 2783 1132 164 5 0 chr5 101581975 101582164 -101503368 - AluSg/x SINE Alu -41 271 82 303 361 68 41 chr5 101582164 101582502 -101503030 - L2 LINE L2 -667 2647 2301 234 128 0 0 chr5 101583326 101583365 -101502167 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 101583454 101583482 -101502050 + AT_rich Low_complexity Low_complexity 1 28 0 256 361 150 18 chr5 101584005 101584232 -101501300 - L2 LINE L2 -543 2771 2515 413 338 59 23 chr5 101584279 101584583 -101500949 + L1MDb LINE L1 1138 1458 -4938 439 266 71 46 chr5 101584599 101584704 -101500828 + L1MDb LINE L1 1552 1653 -4772 1415 176 53 14 chr5 101584704 101584988 -101500544 - AluJo SINE Alu -17 295 1 439 266 71 46 chr5 101584988 101585164 -101500368 + L1MDb LINE L1 1653 1859 -4566 1160 242 70 42 chr5 101585242 101585595 -101499937 - Charlie6 DNA MER1_type -39 3461 3090 1453 211 94 3 chr5 101585595 101585926 -101499606 + MLT1A1 LTR MaLR 1 361 -4 1160 242 70 42 chr5 101585926 101586043 -101499489 - Charlie6 DNA MER1_type -410 3090 2978 30 27 0 0 chr5 101586046 101586083 -101499449 + AT_rich Low_complexity Low_complexity 1 37 0 200 281 11 22 chr5 101586091 101586180 -101499352 + (CATATA)n Simple_repeat Simple_repeat 5 92 0 1436 225 129 52 chr5 101586188 101586451 -101499081 - L1M4c LINE L1 -4469 2488 2247 2166 120 0 3 chr5 101586451 101586750 -101498782 - AluSx SINE Alu -14 298 1 1436 225 129 52 chr5 101586750 101587143 -101498389 - L1M4c LINE L1 -4710 2247 1745 1764 234 47 28 chr5 101587171 101587640 -101497892 - L1M4c LINE L1 -5446 1413 936 1967 262 42 39 chr5 101587712 101588436 -101497096 - L1M4c LINE L1 -6051 808 3 2135 251 38 74 chr5 101588447 101589620 -101495912 - L1MEc LINE L1 -4049 2347 1218 572 304 34 15 chr5 101589616 101589820 -101495712 - L1MEc LINE L1 -6147 249 42 * 2080 165 64 7 chr5 101591047 101591452 -101494080 - MSTA LTR MaLR 0 428 1 189 74 0 0 chr5 101591656 101591683 -101493849 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 250 132 13 chr5 101591721 101591797 -101493735 + L2 LINE L2 3188 3272 0 6072 191 11 5 chr5 101592125 101593379 -101492153 - L1 LINE L1 -1101 5045 3784 1983 117 31 0 chr5 101593404 101593734 -101491798 - AluY SINE Alu 0 311 1 5950 101 23 2 chr5 101593748 101594805 -101490727 + L1PB1 LINE L1 5068 6151 0 240 303 80 34 chr5 101594841 101595156 -101490376 + L1ME3 LINE L1 3587 3922 -2224 21 36 0 0 chr5 101595157 101595185 -101490347 + AT_rich Low_complexity Low_complexity 1 28 0 512 114 0 11 chr5 101595194 101595282 -101490250 - L1PB4 LINE L1 -2 6154 6068 246 317 48 0 chr5 101595376 101595480 -101490052 + L1ME3 LINE L1 4055 4163 -1983 543 286 102 46 chr5 101596573 101596898 -101488634 + HAL1 LINE L1 168 510 -1997 2188 269 81 6 chr5 101597079 101597811 -101487721 + L1ME3 LINE L1 5359 6145 -17 326 344 16 0 chr5 101597890 101598012 -101487520 + MLT1I LTR MaLR 17 140 -269 905 261 37 25 chr5 101598113 101598435 -101487097 + HAL1 LINE L1 1394 1719 -788 273 328 73 30 chr5 101598514 101598866 -101486666 + MLT1J LTR MaLR 97 505 -6 641 271 8 69 chr5 101598973 101599235 -101486297 + HAL1 LINE L1 2241 2486 -21 932 302 63 46 chr5 101601038 101601171 -101484361 + MLT1J LTR MaLR 1 130 -381 2389 144 18 0 chr5 101601171 101601552 -101483980 + MLT1B LTR MaLR 3 390 0 932 302 63 46 chr5 101601552 101601878 -101483654 + MLT1J LTR MaLR 130 468 -43 289 288 42 68 chr5 101604022 101604065 -101481467 - L2 LINE L2 0 3313 3270 1937 202 71 61 chr5 101604065 101604574 -101480958 + MER67D LTR ERV1 1 514 0 289 288 42 68 chr5 101604574 101604648 -101480884 - L2 LINE L2 -43 3270 3199 1977 128 131 0 chr5 101604721 101605064 -101480468 - MSTA LTR MaLR 0 428 41 564 344 36 50 chr5 101605885 101606248 -101479284 + L2 LINE L2 2930 3287 -26 23 78 0 0 chr5 101607279 101607330 -101478202 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 101607551 101607572 -101477960 + AT_rich Low_complexity Low_complexity 1 21 0 1708 186 52 3 chr5 101608213 101608541 -101476991 + MLT1A1 LTR MaLR 21 364 -1 752 314 48 16 chr5 101608822 101609074 -101476458 + MIR SINE MIR 3 262 0 237 305 41 24 chr5 101609132 101609272 -101476260 - MIR3 SINE MIR -64 144 8 2164 113 3 31 chr5 101609415 101609733 -101475799 - AluSx SINE Alu -3 309 1 527 174 0 0 chr5 101609735 101609821 -101475711 - MIR SINE MIR -111 151 66 2352 90 3 3 chr5 101610649 101610961 -101474571 - AluSp SINE Alu 0 313 2 195 42 0 0 chr5 101611301 101611325 -101474207 + (TA)n Simple_repeat Simple_repeat 1 24 0 330 296 37 52 chr5 101611532 101611667 -101473865 + MLT1K LTR MaLR 102 234 -354 787 228 83 19 chr5 101611929 101612280 -101473252 - LTR25 LTR ERV1 -41 753 417 394 140 18 114 chr5 101612456 101612570 -101472962 - MER61E LTR ERV1 -466 103 1 21 36 0 0 chr5 101612967 101612995 -101472537 + AT_rich Low_complexity Low_complexity 1 28 0 2266 91 10 0 chr5 101614224 101614532 -101471000 + AluY SINE Alu 1 311 0 241 155 35 0 chr5 101615696 101615754 -101469778 + (TA)n Simple_repeat Simple_repeat 2 61 0 229 68 45 0 chr5 101615766 101615810 -101469722 + (TG)n Simple_repeat Simple_repeat 1 46 0 270 238 143 38 chr5 101616513 101616618 -101468914 - L2 LINE L2 -25 3288 3173 243 301 108 0 chr5 101616690 101616783 -101468749 - MIR SINE MIR -94 168 66 502 298 54 50 chr5 101616875 101617133 -101468399 + MIR SINE MIR 3 261 -1 2326 57 40 3 chr5 101620666 101620964 -101464568 + AluY SINE Alu 1 309 -2 256 191 0 0 chr5 101621002 101621049 -101464483 - MLT1K LTR MaLR -168 420 374 3293 71 2 11 chr5 101621132 101621584 -101463948 + LTR7 LTR ERV1 1 448 -2 1526 165 75 19 chr5 101621844 101622165 -101463367 + MER44D DNA MER2_type 1 609 0 2545 193 45 12 chr5 101622365 101622925 -101462607 - L1MD3 LINE L1 -14 7981 7404 392 278 78 0 chr5 101622926 101623041 -101462491 - MLT1F1 LTR MaLR -443 124 1 597 229 11 50 chr5 101623042 101623221 -101462311 - L1MD3 LINE L1 -718 7277 7106 210 91 0 0 chr5 101623235 101623268 -101462264 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 25586 119 11 12 chr5 101623277 101628289 -101457243 - L1P3 LINE L1 -1425 5036 8 968 283 43 5 chr5 101628367 101628738 -101456794 + L1MD2 LINE L1 4709 5093 -1053 6905 132 9 11 chr5 101628756 101630110 -101455422 - L1MA1 LINE L1 0 6302 4953 2508 253 47 32 chr5 101630109 101631150 -101454382 + L1MD2 LINE L1 5078 6132 -227 * 24 53 0 0 chr5 101631170 101631208 -101454324 + AT_rich Low_complexity Low_complexity 1 38 0 510 174 104 0 chr5 101631208 101631323 -101454209 - L1MD3 LINE L1 -959 7036 6910 22 0 0 0 chr5 101631428 101631450 -101454082 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr5 101632175 101632201 -101453331 + (TG)n Simple_repeat Simple_repeat 2 27 0 288 347 76 7 chr5 101633604 101633748 -101451784 - MIR SINE MIR -56 206 53 2141 130 0 0 chr5 101633906 101634213 -101451319 + AluSx SINE Alu 3 309 -3 225 0 0 0 chr5 101634322 101634347 -101451185 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 8703 187 50 36 chr5 101634800 101635825 -101449707 - L1MB1 LINE L1 0 6168 5158 741 69 0 0 chr5 101635825 101635927 -101449605 - L1PA13 LINE L1 -2 6161 6060 8703 187 50 36 chr5 101635927 101638062 -101447470 - L1MB1 LINE L1 -1010 5158 2971 301 348 27 51 chr5 101638508 101638764 -101446768 - L1MEc LINE L1 -2157 4058 3809 37051 36 16 1 chr5 101638880 101644908 -101440624 + L1PA3 LINE L1 1 6150 -5 409 229 12 0 chr5 101645055 101645138 -101440394 + L1 LINE L1 4843 4926 -1220 30 27 0 0 chr5 101645339 101645376 -101440156 + AT_rich Low_complexity Low_complexity 1 37 0 373 391 73 19 chr5 101645405 101645852 -101439680 + L1ME LINE L1 5256 5730 -391 823 261 51 83 chr5 101646611 101647006 -101438526 + LTR16A1 LTR ERVL 15 396 -61 300 250 80 0 chr5 101649455 101649555 -101435977 - L1ME LINE L1 -362 5800 5693 1930 159 3 7 chr5 101649580 101649876 -101435656 - AluJb SINE Alu -17 295 1 450 293 3 37 chr5 101650279 101650576 -101434956 - L1MEc LINE L1 -2816 3399 3113 587 284 44 20 chr5 101650652 101650948 -101434584 - L1MEc LINE L1 -3654 2561 2259 239 240 48 64 chr5 101651133 101651258 -101434274 - L1MEc LINE L1 -4655 1741 1619 2443 57 0 0 chr5 101651322 101651619 -101433913 - AluY SINE Alu -14 297 1 188 360 52 37 chr5 101652405 101652541 -101432991 + L2 LINE L2 3160 3297 -16 21 0 0 0 chr5 101656344 101656365 -101429167 + AT_rich Low_complexity Low_complexity 1 21 0 314 322 0 0 chr5 101656492 101656582 -101428950 + MER82 DNA MER2_type 7 96 -557 222 310 42 63 chr5 101656619 101656761 -101428771 - MIR SINE MIR -57 205 67 401 205 12 0 chr5 101656761 101656844 -101428688 + MER82 DNA MER2_type 570 653 0 332 315 27 0 chr5 101656978 101657124 -101428408 - L1ME LINE L1 -908 5238 5089 276 295 108 30 chr5 101657174 101657558 -101427974 - L1ME LINE L1 -1141 5005 4568 1406 270 29 82 chr5 101657558 101658184 -101427348 - MLT1E LTR MaLR 0 593 1 276 295 108 30 chr5 101658184 101658299 -101427233 - L1ME LINE L1 -1578 4568 4463 331 345 35 31 chr5 101658399 101658625 -101426907 - L1ME LINE L1 -1900 4246 4020 2483 216 23 3 chr5 101708696 101709262 -101376270 - L1 LINE L1 -826 5320 4744 1025 172 35 4 chr5 101709266 101709493 -101376039 + L1 LINE L1 4242 4475 -1671 291 283 0 20 chr5 101710811 101710910 -101374622 + (CAGAGA)n Simple_repeat Simple_repeat 3 99 0 236 319 0 0 chr5 101711468 101711537 -101373995 + GA-rich Low_complexity Low_complexity 1 69 0 22 0 0 0 chr5 101711544 101711566 -101373966 + GC_rich Low_complexity Low_complexity 1 22 0 291 54 0 0 chr5 101713331 101713368 -101372164 + (T)n Simple_repeat Simple_repeat 1 37 0 206 121 30 0 chr5 101713375 101713408 -101372124 + GA-rich Low_complexity Low_complexity 2 35 0 1526 185 0 0 chr5 101713673 101713943 -101371589 - AluJb SINE Alu -21 291 22 255 310 142 0 chr5 101714501 101714614 -101370918 + L1ME3A LINE L1 5533 5661 -460 251 236 57 38 chr5 101717478 101717584 -101367948 + L1ME2 LINE L1 6047 6154 -10 1982 219 35 22 chr5 101717636 101718125 -101367407 - MLT1D LTR MaLR -8 497 3 212 178 0 22 chr5 101720803 101720848 -101364684 + GA-rich Low_complexity Low_complexity 3 46 0 3874 86 29 6 chr5 101722836 101723598 -101361934 - L1P3 LINE L1 -593 5579 4805 222 212 0 45 chr5 101728069 101728135 -101357397 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2246 79 3 3 chr5 101729245 101729549 -101355983 - AluY SINE Alu -7 304 1 518 211 145 20 chr5 101729905 101730057 -101355475 + L1ME3A LINE L1 5706 5876 -294 698 208 127 34 chr5 101730340 101730727 -101354805 + MER31B LTR ERV1 1 543 0 186 66 49 49 chr5 101732031 101732092 -101353440 + GA-rich Low_complexity Low_complexity 2 62 0 218 309 107 0 chr5 101732571 101732655 -101352877 + MIR SINE MIR 40 132 -130 230 189 0 0 chr5 101733168 101733205 -101352327 + L1P LINE L1 4885 4921 -1225 181 343 27 27 chr5 101733466 101733539 -101351993 + MIR3 SINE MIR 109 181 -27 203 302 47 0 chr5 101733885 101733991 -101351541 + (CATA)n Simple_repeat Simple_repeat 4 114 0 360 296 96 7 chr5 101734022 101734157 -101351375 - MIR SINE MIR -51 211 65 290 179 21 21 chr5 101735299 101735394 -101350138 + A-rich Low_complexity Low_complexity 4 98 0 22 0 0 0 chr5 101735747 101735769 -101349763 + AT_rich Low_complexity Low_complexity 1 22 0 1019 196 44 5 chr5 101737781 101737985 -101347547 + MLT1A1 LTR MaLR 154 365 0 518 269 26 6 chr5 101737993 101738149 -101347383 + LTR16A1 LTR ERVL 298 456 -1 837 340 42 11 chr5 101738150 101738597 -101346935 + HERV16 LTR ERVL 1 461 -4535 548 328 53 39 chr5 101738790 101739202 -101346330 + ERVL LTR ERVL 4057 4474 -1290 313 252 122 42 chr5 101739623 101739885 -101345647 + L1ME4a LINE L1 5597 5879 -242 1003 82 7 0 chr5 101740271 101740406 -101345126 + AluSq/x SINE Alu 2 137 -175 1833 131 21 0 chr5 101740406 101740696 -101344836 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr5 101743224 101743247 -101342285 + AT_rich Low_complexity Low_complexity 1 23 0 594 177 9 18 chr5 101746123 101746236 -101339296 + AluJb SINE Alu 201 312 0 1904 169 28 68 chr5 101746268 101746693 -101338839 + MLT2D LTR ERVL 3 410 -4 196 344 197 0 chr5 101746695 101746913 -101338619 - L2 LINE L2 -823 2491 2231 194 352 136 0 chr5 101747754 101747879 -101337653 + MER5A DNA MER1_type 7 148 -41 21 0 0 0 chr5 101748016 101748037 -101337495 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 101748857 101748888 -101336644 + AT_rich Low_complexity Low_complexity 1 31 0 781 104 0 2 chr5 101749763 101749885 -101335647 - LTR12 LTR ERV1 -133 581 49 282 236 0 0 chr5 101749885 101749957 -101335575 - LTR30 LTR ERV1 -98 624 553 1338 133 153 4 chr5 101749958 101750206 -101335326 - LTR12 LTR ERV1 -429 285 1 265 88 0 0 chr5 101750374 101750408 -101335124 + U2 snRNA snRNA 1 34 -154 407 270 0 16 chr5 101751022 101751148 -101334384 + MLT1H LTR MaLR 111 234 -315 2239 92 0 0 chr5 101751836 101752129 -101333403 + AluSg1 SINE Alu 1 293 -16 24 0 0 0 chr5 101752490 101752514 -101333018 + AT_rich Low_complexity Low_complexity 1 24 0 1433 228 19 27 chr5 101752992 101753360 -101332172 + MLT1A1 LTR MaLR 1 365 0 282 29 0 0 chr5 101755495 101755530 -101330002 + (TG)n Simple_repeat Simple_repeat 1 35 0 304 95 0 0 chr5 101758509 101758551 -101326981 - 5S rRNA rRNA -79 42 1 323 333 134 10 chr5 101758555 101758756 -101326776 - MIR SINE MIR -7 255 30 25 31 0 0 chr5 101760555 101760587 -101324945 + AT_rich Low_complexity Low_complexity 1 32 0 269 307 98 31 chr5 101760668 101760831 -101324701 + MLT1L LTR MaLR 48 221 -394 407 328 56 10 chr5 101760842 101761037 -101324495 + MLT1L LTR MaLR 412 615 0 1618 214 14 22 chr5 101761532 101761891 -101323641 + MLT1A1 LTR MaLR 6 361 -4 360 0 0 0 chr5 101762380 101762420 -101323112 + (TG)n Simple_repeat Simple_repeat 2 41 0 209 283 98 22 chr5 101762988 101763080 -101322452 + MIR SINE MIR 77 175 -87 2346 101 0 0 chr5 101763178 101763486 -101322046 + AluSc SINE Alu 1 308 -1 943 193 35 0 chr5 101764781 101764978 -101320554 - L1ME LINE L1 -445 5719 5516 291 325 61 16 chr5 101765014 101765260 -101320272 - L1MDa LINE L1 -981 1920 1571 434 320 82 48 chr5 101765519 101766019 -101319513 - L1MDa LINE L1 -5281 1249 733 22 35 0 0 chr5 101766780 101766809 -101318723 + AT_rich Low_complexity Low_complexity 1 29 0 1508 196 21 10 chr5 101767197 101767488 -101318044 - AluJb SINE Alu -18 294 1 2091 135 21 47 chr5 101768088 101768473 -101317059 + THE1C LTR MaLR 1 375 0 358 209 45 64 chr5 101768611 101768721 -101316811 - MIR SINE MIR -51 211 104 638 110 28 0 chr5 101768821 101768930 -101316602 - L1P LINE L1 -1444 4702 4591 584 135 0 10 chr5 101768917 101769013 -101316519 + L1P LINE L1 4473 4567 -1579 * 24 67 0 0 chr5 101769896 101769941 -101315591 + AT_rich Low_complexity Low_complexity 1 45 0 209 241 17 0 chr5 101774938 101774996 -101310536 + (TA)n Simple_repeat Simple_repeat 2 60 0 229 217 96 24 chr5 101775178 101775261 -101310271 - MER103 DNA DNA -52 114 26 468 299 82 41 chr5 101775702 101775946 -101309586 - MLT1L LTR MaLR 0 615 362 221 325 49 32 chr5 101777213 101777336 -101308196 + MIR SINE MIR 1 125 -137 583 279 45 18 chr5 101778832 101779054 -101306478 - LTR16B LTR ERVL -1 463 236 2004 54 0 8 chr5 101779543 101779802 -101305730 - L1PA8 LINE L1 -7 6165 5909 299 319 43 11 chr5 101779855 101779949 -101305583 + MIR SINE MIR 36 132 -130 723 187 8 8 chr5 101780101 101780235 -101305297 - MLT1D LTR MaLR -352 153 20 396 192 0 0 chr5 101780231 101780304 -101305228 + MLT1D LTR MaLR 284 356 -149 * 2440 164 57 24 chr5 101780977 101781524 -101304008 - L1MA8 LINE L1 -6 6285 5721 1913 140 0 4 chr5 101781929 101782201 -101303331 - AluSx SINE Alu -13 299 29 216 311 14 27 chr5 101783532 101783606 -101301926 + L2 LINE L2 3191 3263 -9 318 26 0 0 chr5 101784512 101784551 -101300981 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr5 101785977 101785998 -101299534 + AT_rich Low_complexity Low_complexity 1 21 0 357 320 17 69 chr5 101787602 101787777 -101297755 - MER5B DNA MER1_type 0 178 13 652 169 0 44 chr5 101787796 101787932 -101297600 - MER5A DNA MER1_type -28 161 32 381 277 244 38 chr5 101788193 101788406 -101297126 - MIR SINE MIR -4 258 2 254 222 0 0 chr5 101788510 101788564 -101296968 - MIR SINE MIR -3 259 206 186 293 114 89 chr5 101788856 101788979 -101296553 - MIR3 SINE MIR -75 133 8 199 160 0 100 chr5 101789223 101789273 -101296259 + MIR SINE MIR 218 262 0 996 121 0 73 chr5 101790897 101790925 -101294607 - AluSq SINE Alu -160 153 125 1942 121 21 7 chr5 101790925 101791214 -101294318 - AluSx SINE Alu -19 293 1 996 121 0 73 chr5 101791214 101791350 -101294182 - AluSq SINE Alu -188 125 1 2206 104 3 0 chr5 101791481 101791778 -101293754 + AluSx SINE Alu 1 298 -14 453 19 0 0 chr5 101791779 101791833 -101293699 + (CA)n Simple_repeat Simple_repeat 2 55 0 2049 123 0 10 chr5 101792055 101792348 -101293184 - AluSx SINE Alu -22 290 1 276 300 173 25 chr5 101792421 101792698 -101292834 - L1ME LINE L1 -342 5779 5462 213 39 0 0 chr5 101793322 101793348 -101292184 + (T)n Simple_repeat Simple_repeat 1 26 0 26 30 0 0 chr5 101793405 101793438 -101292094 + AT_rich Low_complexity Low_complexity 1 33 0 420 355 42 0 chr5 101793572 101793761 -101291771 + MIR SINE MIR 47 243 -19 458 251 227 45 chr5 101795254 101795633 -101289899 - MLT1J2 LTR MaLR 0 450 3 353 342 89 6 chr5 101796733 101796891 -101288641 + MIR SINE MIR 58 228 -34 1935 151 50 0 chr5 101797241 101797560 -101287972 - MER44D DNA MER2_type -4 605 1 285 333 14 22 chr5 101798044 101798182 -101287350 + MIR SINE MIR 76 212 -50 25 31 0 0 chr5 101798298 101798330 -101287202 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr5 101799919 101799952 -101285580 + AT_rich Low_complexity Low_complexity 1 33 0 253 88 66 22 chr5 101799955 101800046 -101285486 + (TA)n Simple_repeat Simple_repeat 1 95 0 193 231 0 0 chr5 101801553 101801592 -101283940 + L2 LINE L2 3275 3313 0 42 86 0 0 chr5 101802725 101802830 -101282702 + AT_rich Low_complexity Low_complexity 1 105 0 456 320 79 42 chr5 101802879 101803260 -101282272 + MLT1I LTR MaLR 1 395 -14 504 307 55 51 chr5 101803475 101803768 -101281764 + LTR16A1 LTR ERVL 163 456 -1 1355 162 50 56 chr5 101804889 101805266 -101280266 - THE1C LTR MaLR 0 375 1 384 288 90 50 chr5 101805339 101805662 -101279870 + L1MC4a LINE L1 5598 5933 -1875 428 298 122 5 chr5 101806316 101806504 -101279028 + MIR SINE MIR 49 258 -4 1669 43 24 0 chr5 101807051 101807259 -101278273 - L1PA8 LINE L1 -233 5939 5727 1685 83 0 12 chr5 101807259 101807495 -101278037 + L1PA8 LINE L1 5932 6168 -4 623 294 126 39 chr5 101807770 101808060 -101277472 + MLT1L LTR MaLR 142 480 -135 2150 98 0 0 chr5 101808060 101808334 -101277198 - AluSg SINE Alu -13 297 24 623 294 126 39 chr5 101808334 101808455 -101277077 + MLT1L LTR MaLR 480 589 -26 2086 109 20 7 chr5 101808465 101808759 -101276773 - AluSx SINE Alu -14 298 1 1216 276 40 33 chr5 101809239 101809663 -101275869 - L2 LINE L2 -871 2443 2017 1804 181 0 0 chr5 101809696 101809989 -101275543 + AluJb SINE Alu 1 293 -19 222 284 47 79 chr5 101810025 101810152 -101275380 + L2 LINE L2 1460 1582 -1732 243 0 0 0 chr5 101810863 101810890 -101274642 + (TG)n Simple_repeat Simple_repeat 1 27 0 775 230 24 16 chr5 101812355 101812603 -101272929 + L1MC5 LINE L1 7665 7914 -47 23 33 0 0 chr5 101813267 101813297 -101272235 + AT_rich Low_complexity Low_complexity 1 30 0 272 356 61 11 chr5 101813520 101813700 -101271832 + L2 LINE L2 2726 2914 -400 195 283 67 17 chr5 101813800 101813860 -101271672 - L2 LINE L2 -19 3253 3191 28 71 0 0 chr5 101813902 101813958 -101271574 + AT_rich Low_complexity Low_complexity 1 56 0 290 268 0 0 chr5 101817984 101818055 -101267477 - MIR SINE MIR -3 259 189 200 357 0 30 chr5 101818615 101818783 -101266749 + A-rich Low_complexity Low_complexity 3 165 0 228 67 0 0 chr5 101819447 101819477 -101266055 + (TG)n Simple_repeat Simple_repeat 2 31 0 383 59 0 0 chr5 101821235 101821286 -101264246 - MADE1 DNA Mariner -27 53 3 417 289 26 7 chr5 101821597 101821749 -101263783 - MER103 DNA DNA -9 157 3 446 314 67 21 chr5 101821867 101822061 -101263471 - MIR SINE MIR -40 222 20 2132 77 24 0 chr5 101822233 101822405 -101263127 - AluY SINE Alu -7 304 121 183 42 0 0 chr5 101822405 101822429 -101263103 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2132 77 24 0 chr5 101822429 101822553 -101262979 - AluY SINE Alu -190 121 1 465 260 192 50 chr5 101822723 101823015 -101262517 + L2 LINE L2 993 1357 -1957 1950 138 0 3 chr5 101823015 101823304 -101262228 - AluSx SINE Alu -24 288 1 465 260 192 50 chr5 101823304 101823407 -101262125 + L2 LINE L2 1357 1444 -1870 1165 306 141 31 chr5 101823407 101823558 -101261974 + L2 LINE L2 1654 1787 -1527 4242 98 4 52 chr5 101823558 101823789 -101261743 - L1MA3 LINE L1 -13 6292 6052 688 197 162 0 chr5 101823789 101823931 -101261601 - FRAM SINE Alu -1 165 1 4242 98 4 52 chr5 101823931 101824396 -101261136 - L1MA3 LINE L1 -253 6052 5629 1165 306 141 31 chr5 101824396 101824944 -101260588 + L2 LINE L2 1787 2430 -884 835 332 79 41 chr5 101825215 101826163 -101259369 - ERVL LTR ERVL -1312 4452 3414 26 30 0 0 chr5 101828172 101828205 -101257327 + AT_rich Low_complexity Low_complexity 1 33 0 259 250 122 26 chr5 101828209 101828365 -101257167 + L1ME1 LINE L1 5698 5868 -253 4660 143 17 28 chr5 101830276 101831240 -101254292 + L1MA2 LINE L1 5376 6304 0 355 289 84 16 chr5 101833308 101833447 -101252085 - MIR SINE MIR -58 150 1 421 279 88 39 chr5 101833566 101833770 -101251762 + MIR SINE MIR 40 253 -9 1105 223 35 0 chr5 101834089 101834318 -101251214 - MER8 DNA MER2_type 0 239 3 378 0 0 0 chr5 101834318 101834360 -101251172 + (TA)n Simple_repeat Simple_repeat 1 42 0 2191 183 41 7 chr5 101834380 101834822 -101250710 + MSTB2 LTR MaLR 1 457 0 226 368 26 8 chr5 101835267 101835384 -101250148 - L2 LINE L2 -504 2810 2692 1978 136 10 3 chr5 101836008 101836302 -101249230 - AluJb SINE Alu -16 296 1 180 0 0 0 chr5 101836425 101836445 -101249087 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 240 98 122 0 chr5 101837328 101837369 -101248163 + AluSc SINE Alu 1 46 -257 4563 122 30 28 chr5 101837369 101838741 -101246791 + pTR5 LTR ERV1 750 2438 0 1816 98 11 11 chr5 101838744 101839010 -101246522 + AluSc SINE Alu 31 296 -13 463 241 9 0 chr5 101839096 101839212 -101246320 + L1ME1 LINE L1 6049 6165 -1 598 254 7 0 chr5 101839222 101839360 -101246172 - L1M4 LINE L1 -6389 153 15 280 205 57 57 chr5 101839354 101839459 -101246073 - L1ME3A LINE L1 -242 5928 5840 * 1361 195 37 14 chr5 101839498 101839795 -101245737 - MER1B DNA MER1_type -8 331 28 1470 264 131 21 chr5 101839896 101840791 -101244741 - L1M4 LINE L1 -2190 3956 2964 380 238 100 12 chr5 101840815 101840975 -101244557 - L1M4 LINE L1 -3603 2543 2370 330 207 129 0 chr5 101840997 101841113 -101244419 + L1M4 LINE L1 5218 5348 -798 711 152 80 0 chr5 101841123 101841274 -101244258 - L1MB4 LINE L1 -1 6179 6017 565 262 24 12 chr5 101841742 101841906 -101243626 - MER5B DNA MER1_type 0 178 13 452 292 41 29 chr5 101842285 101842456 -101243076 + MER5B DNA MER1_type 6 178 0 23 0 0 0 chr5 101842642 101842665 -101242867 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 101842996 101843032 -101242500 + (CA)n Simple_repeat Simple_repeat 2 37 0 236 188 72 43 chr5 101843248 101843317 -101242215 - L2 LINE L2 -1 3312 3242 4109 146 15 10 chr5 101843423 101844274 -101241258 + L1MA8 LINE L1 5123 5977 -314 2515 106 13 19 chr5 101845267 101845644 -101239888 - THE1C LTR MaLR 0 375 1 9731 128 17 39 chr5 101845644 101846773 -101238759 - THE1C-int LTR MaLR 0 1580 495 2276 104 3 0 chr5 101846773 101847072 -101238460 - AluY SINE Alu -11 300 1 9731 128 17 39 chr5 101847072 101847557 -101237975 - THE1C-int LTR MaLR -1085 495 1 2214 129 44 22 chr5 101847559 101847924 -101237608 - THE1C LTR MaLR -2 373 1 670 211 111 67 chr5 101848048 101848256 -101237276 + MER20 DNA MER1_type 2 218 -1 3911 196 68 52 chr5 101848448 101849386 -101236146 + LTR28 LTR ERV1 1 953 -67 313 222 74 89 chr5 101849417 101849552 -101235980 + LTR27 LTR ERV1 502 634 -2 22 35 0 0 chr5 101849579 101849608 -101235924 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 101849855 101849878 -101235654 + AT_rich Low_complexity Low_complexity 1 23 0 1286 270 54 16 chr5 101850284 101850713 -101234819 + L1M4 LINE L1 25 469 -5954 1644 250 16 56 chr5 101850865 101851436 -101234096 + L1M4 LINE L1 862 1409 -5014 233 355 45 41 chr5 101851436 101851656 -101233876 - MIR SINE MIR -14 248 28 2569 46 3 0 chr5 101852280 101852586 -101232946 + AluY SINE Alu 1 307 -4 1562 169 69 34 chr5 101852670 101852868 -101232664 - MER46B DNA MER2_type -2495 236 144 1552 153 22 22 chr5 101852868 101853136 -101232396 - AluJo SINE Alu 0 312 45 1562 169 69 34 chr5 101853136 101853286 -101232246 - MER46B DNA MER2_type -2587 144 1 200 122 24 0 chr5 101853574 101853615 -101231917 + (TTTAA)n Simple_repeat Simple_repeat 1 42 0 836 204 32 107 chr5 101853806 101853978 -101231554 + MER33 DNA MER1_type 7 143 -2442 1369 211 14 7 chr5 101853978 101854258 -101231274 - AluJo SINE Alu -30 282 1 836 204 32 107 chr5 101854258 101854423 -101231109 + MER33 DNA MER1_type 143 319 -5 1788 238 71 39 chr5 101854479 101855193 -101230339 + L1M4 LINE L1 2429 3165 -3957 263 250 0 29 chr5 101855190 101855258 -101230274 + L1M4 LINE L1 6448 6513 -456 * 268 186 0 17 chr5 101855313 101855372 -101230160 + L1MCc LINE L1 4693 4750 -2191 2022 123 0 7 chr5 101855381 101855665 -101229867 + AluSx SINE Alu 1 282 -30 252 0 0 0 chr5 101855666 101855694 -101229838 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7578 23 0 0 chr5 101855694 101857104 -101228428 - L1PA3 LINE L1 -18 6137 4728 336 144 2 12 chr5 101857104 101857153 -101228379 + Alu SINE Alu 251 295 -6 3548 236 81 37 chr5 101857157 101857842 -101227690 + L1MCc LINE L1 4759 5412 -1840 282 29 0 0 chr5 101857842 101857877 -101227655 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3548 236 81 37 chr5 101857877 101858481 -101227051 + L1MCc LINE L1 5412 6136 -1116 5343 135 19 12 chr5 101858481 101859617 -101225915 + L1PA16 LINE L1 5017 6157 -9 3548 236 81 37 chr5 101859617 101860009 -101225523 + L1MCc LINE L1 6136 6509 -743 563 345 59 17 chr5 101860087 101860444 -101225088 + L1MEc LINE L1 41 412 -5984 1737 236 63 32 chr5 101860751 101861322 -101224210 + L1ME LINE L1 4753 5362 -804 1924 138 3 3 chr5 101861322 101861612 -101223920 + AluSx SINE Alu 1 290 -22 1737 236 63 32 chr5 101861612 101861985 -101223547 + L1ME LINE L1 5362 5722 -444 879 291 81 29 chr5 101865827 101866274 -101219258 + MLT1J LTR MaLR 25 494 -17 324 383 33 29 chr5 101869297 101869571 -101215961 + L2 LINE L2 2220 2494 -820 1448 149 20 47 chr5 101869617 101869918 -101215614 + L1PB4 LINE L1 5864 6156 0 25 0 0 0 chr5 101869918 101869943 -101215589 + AT_rich Low_complexity Low_complexity 1 25 0 472 286 33 16 chr5 101870452 101870634 -101214898 + L2 LINE L2 3129 3313 0 414 215 30 68 chr5 101870729 101870838 -101214694 - L1MC4 LINE L1 -2 8040 7928 1484 179 32 67 chr5 101870838 101871213 -101214319 - MLT1A1 LTR MaLR -3 362 1 414 215 30 68 chr5 101871213 101871368 -101214164 - L1MC4 LINE L1 -114 7928 7703 317 318 16 0 chr5 101871415 101871541 -101213991 + MLT1L LTR MaLR 483 610 -5 2421 59 0 16 chr5 101871653 101871960 -101213572 + AluY SINE Alu 1 302 -9 236 357 0 0 chr5 101871973 101872029 -101213503 + L2 LINE L2 3246 3301 -12 279 250 44 0 chr5 101872225 101872293 -101213239 - MIR3 SINE MIR -5 203 133 697 294 5 10 chr5 101872643 101872847 -101212685 + MIR SINE MIR 6 208 -54 13196 143 59 7 chr5 101873211 101875509 -101210023 - Tigger1 DNA MER2_type 0 2418 1 3939 92 15 0 chr5 101876598 101877144 -101208388 - MER41A LTR ERV1 0 554 1 225 0 0 0 chr5 101877547 101877572 -101207960 + (CA)n Simple_repeat Simple_repeat 1 25 0 287 208 0 0 chr5 101878273 101878326 -101207206 - L2 LINE L2 0 3313 3261 25 0 0 0 chr5 101879237 101879262 -101206270 + AT_rich Low_complexity Low_complexity 1 25 0 1631 188 45 18 chr5 101879273 101879654 -101205878 + MER67C LTR ERV1 6 403 -243 369 244 107 8 chr5 101879692 101879823 -101205709 + MER67D LTR ERV1 368 511 -3 7096 51 8 0 chr5 101881991 101882961 -101202571 + L1PA7 LINE L1 5175 6151 -3 335 166 24 19 chr5 101883535 101883627 -101201905 - MLT1G LTR MaLR -9 645 509 301 307 39 43 chr5 101883733 101883959 -101201573 - MLT1G3 LTR MaLR -298 232 31 1871 146 6 19 chr5 101886788 101887103 -101198429 + AluJb SINE Alu 1 311 -1 386 314 109 42 chr5 101888031 101888493 -101197039 - L2 LINE L2 -221 3051 2560 484 146 73 0 chr5 101888534 101888630 -101196902 - MER53 DNA DNA 0 189 87 207 162 0 0 chr5 101888632 101888669 -101196863 + (CA)n Simple_repeat Simple_repeat 2 38 0 376 313 90 0 chr5 101888707 101888873 -101196659 - L2 LINE L2 -892 2422 2242 209 265 0 0 chr5 101891454 101891503 -101194029 - L2 LINE L2 -3 3310 3262 206 354 83 0 chr5 101892527 101892623 -101192909 - L2 LINE L2 0 3313 3210 469 193 25 99 chr5 101895499 101895660 -101189872 - FRAM SINE Alu -17 159 11 830 206 0 7 chr5 101895674 101895829 -101189703 - FRAM SINE Alu -13 163 10 1168 173 89 22 chr5 101895829 101896153 -101189379 - Charlie5 DNA MER1_type -11 2601 2256 329 165 0 62 chr5 101896160 101896257 -101189275 - Charlie5 DNA MER1_type -2489 123 33 581 311 28 11 chr5 101896836 101897013 -101188519 - MIR3 SINE MIR -9 199 20 296 229 9 48 chr5 101897694 101897799 -101187733 + L1MC5 LINE L1 7831 7931 -30 581 374 36 21 chr5 101898977 101899306 -101186226 + MLT1K LTR MaLR 7 340 -248 25 0 0 0 chr5 101899484 101899509 -101186023 + AT_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr5 101899595 101899633 -101185899 + AT_rich Low_complexity Low_complexity 1 38 0 259 303 124 0 chr5 101899667 101899756 -101185776 - L2 LINE L2 -27 3245 3146 3452 163 122 17 chr5 101899846 101900594 -101184938 + LTR1B LTR ERV1 1 826 0 430 188 59 0 chr5 101900603 101900704 -101184828 + L1MD3 LINE L1 7879 7985 -10 253 200 14 43 chr5 101901316 101901386 -101184146 + MLT1L LTR MaLR 134 201 -414 257 232 0 29 chr5 101901598 101901667 -101183865 + MLT1L LTR MaLR 429 495 -120 33 43 0 0 chr5 101901774 101901821 -101183711 + AT_rich Low_complexity Low_complexity 1 47 0 2461 103 28 11 chr5 101901879 101902237 -101183295 + THE1B LTR MaLR 1 364 0 1907 184 21 0 chr5 101902566 101902903 -101182629 + MER7A DNA MER2_type 2 343 -3 377 267 20 80 chr5 101906338 101906488 -101179044 - LTR16A1 LTR ERVL -313 144 4 379 303 106 76 chr5 101906866 101907272 -101178260 - L2 LINE L2 0 3313 2896 499 355 73 0 chr5 101907336 101907556 -101177976 - L2 LINE L2 -496 2818 2583 227 217 0 0 chr5 101907984 101908030 -101177502 + T-rich Low_complexity Low_complexity 1 46 0 1485 60 0 15 chr5 101908042 101908243 -101177289 - L1PA5 LINE L1 0 6154 5957 339 62 42 0 chr5 101908343 101908391 -101177141 - L1PA5 LINE L1 -491 5664 5615 * 1756 34 0 0 chr5 101908381 101908590 -101176942 + L1PA5 LINE L1 5412 5620 -534 360 0 0 0 chr5 101908772 101908818 -101176714 + L1PA4 LINE L1 6110 6155 0 211 278 44 33 chr5 101908872 101908962 -101176570 - L2 LINE L2 -1004 2310 2220 21 0 0 0 chr5 101909368 101909389 -101176143 + AT_rich Low_complexity Low_complexity 1 21 0 227 239 42 14 chr5 101909757 101909828 -101175704 + MLT1J LTR MaLR 416 488 -23 2357 63 20 0 chr5 101910899 101911200 -101174332 - AluY SINE Alu -4 307 1 352 323 137 0 chr5 101911560 101911684 -101173848 - MIR3 SINE MIR -16 192 52 194 259 19 19 chr5 101911725 101911779 -101173753 + L2 LINE L2 3219 3272 0 213 154 0 0 chr5 101913158 101913197 -101172335 + (TG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr5 101917168 101917196 -101168336 + AT_rich Low_complexity Low_complexity 1 28 0 209 231 0 39 chr5 101918130 101918182 -101167350 + CT-rich Low_complexity Low_complexity 5 54 0 183 42 0 0 chr5 101918479 101918503 -101167029 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 983 167 22 11 chr5 101918743 101918923 -101166609 - MER5A DNA MER1_type -7 182 1 221 295 151 14 chr5 101920176 101920315 -101165217 + L2 LINE L2 2230 2387 -927 24 53 0 0 chr5 101920482 101920520 -101165012 + AT_rich Low_complexity Low_complexity 1 38 0 329 351 117 13 chr5 101920647 101920878 -101164654 + L3b LINE CR1 1165 1419 -164 222 360 88 41 chr5 101921518 101921665 -101163867 + L2 LINE L2 3106 3259 -13 205 324 42 0 chr5 101921684 101921755 -101163777 + MER5A DNA MER1_type 59 132 -57 698 241 42 6 chr5 101922190 101922356 -101163176 + MIR3 SINE MIR 37 208 0 367 270 51 56 chr5 101923382 101923605 -101161927 + MIR SINE MIR 33 259 -3 810 294 76 39 chr5 101924096 101924532 -101161000 + LTR33 LTR ERVL 1 452 -69 240 243 0 0 chr5 101925098 101925172 -101160360 + (TA)n Simple_repeat Simple_repeat 2 75 0 5560 167 27 57 chr5 101925218 101926185 -101159347 + L1MC1 LINE L1 4929 5843 -490 1727 197 63 21 chr5 101926185 101926565 -101158967 + MSTD LTR MaLR 1 396 0 5560 167 27 57 chr5 101926565 101927040 -101158492 + L1MC1 LINE L1 5843 6331 -2 609 305 153 37 chr5 101928906 101929586 -101155946 - L2 LINE L2 -4 3309 2545 289 318 0 0 chr5 101930130 101930218 -101155314 - MIR SINE MIR -6 256 169 335 362 41 60 chr5 101930368 101930735 -101154797 - L2 LINE L2 -560 2754 2395 327 176 33 11 chr5 101930735 101930826 -101154706 + GA-rich Low_complexity Low_complexity 3 95 0 2002 200 57 55 chr5 101931371 101931789 -101153743 + MLT1D LTR MaLR 13 429 -76 1070 77 0 0 chr5 101931789 101931932 -101153600 - L1PA8 LINE L1 -2 6170 6028 2002 200 57 55 chr5 101931932 101931954 -101153578 + MLT1D LTR MaLR 429 449 -56 997 198 201 63 chr5 101931954 101932302 -101153230 - MSTD LTR MaLR 0 396 1 2002 200 57 55 chr5 101932302 101932350 -101153182 + MLT1D LTR MaLR 449 503 -2 2141 113 0 0 chr5 101932356 101932649 -101152883 - AluY SINE Alu -18 293 1 209 258 0 32 chr5 101932743 101932805 -101152727 + (TG)n Simple_repeat Simple_repeat 1 60 0 230 212 20 121 chr5 101932805 101932904 -101152628 + L1MC4 LINE L1 6615 6703 -1339 299 229 55 0 chr5 101932904 101933013 -101152519 + (TA)n Simple_repeat Simple_repeat 2 116 0 24 0 0 0 chr5 101934142 101934166 -101151366 + AT_rich Low_complexity Low_complexity 1 24 0 520 339 0 0 chr5 101934843 101935008 -101150524 - MIR SINE MIR -62 200 36 246 381 43 14 chr5 101935245 101935384 -101150148 + MIR SINE MIR 114 256 -6 216 271 0 0 chr5 101935665 101935713 -101149819 + (TATG)n Simple_repeat Simple_repeat 2 49 0 1090 176 5 0 chr5 101936376 101936563 -101148969 + MER5A DNA MER1_type 1 188 -1 1646 205 48 11 chr5 101936669 101937045 -101148487 + MLT1B LTR MaLR 1 390 0 678 233 180 10 chr5 101939190 101939396 -101146136 - MIR SINE MIR -11 251 11 28 0 0 0 chr5 101941123 101941151 -101144381 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 101941940 101941967 -101143565 + AT_rich Low_complexity Low_complexity 1 27 0 234 278 0 0 chr5 101942678 101942732 -101142800 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 25 0 0 0 chr5 101942973 101942998 -101142534 + AT_rich Low_complexity Low_complexity 1 25 0 284 289 167 0 chr5 101943770 101943860 -101141672 - MIR3 SINE MIR -92 116 12 1187 220 46 25 chr5 101946171 101946494 -101139038 + L1MB1 LINE L1 4809 5138 -1008 1293 75 0 23 chr5 101946497 101946671 -101138861 + AluY SINE Alu 130 299 -12 4861 162 40 10 chr5 101946671 101947005 -101138527 + L1MB1 LINE L1 5132 5455 -713 249 33 0 0 chr5 101947005 101947035 -101138497 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 4861 162 40 10 chr5 101947035 101947704 -101137828 + L1MB1 LINE L1 5455 6168 0 1708 158 40 37 chr5 101948542 101948916 -101136616 + THE1C LTR MaLR 1 375 0 9799 124 35 17 chr5 101948916 101950467 -101135065 + THE1C-int LTR MaLR 1 1580 0 1937 145 18 49 chr5 101950467 101950854 -101134678 + THE1C LTR MaLR 1 375 0 199 358 143 16 chr5 101952011 101952444 -101133088 + L2 LINE L2 1783 2270 -1044 243 403 8 0 chr5 101952547 101952666 -101132866 + L2 LINE L2 2439 2558 -756 268 258 16 0 chr5 101953601 101953663 -101131869 + L2 LINE L2 3210 3272 0 762 224 67 6 chr5 101954464 101954643 -101130889 - MIR SINE MIR -12 250 61 426 39 0 0 chr5 101955133 101955185 -101130347 + (TG)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr5 101955897 101955921 -101129611 + AT_rich Low_complexity Low_complexity 1 24 0 619 194 0 0 chr5 101956954 101957052 -101128480 - Tigger7 DNA MER2_type -2 2485 2388 1256 214 8 0 chr5 101957058 101957292 -101128240 - Tigger7 DNA MER2_type -491 242 7 439 135 0 0 chr5 101957674 101957748 -101127784 - L1MA6 LINE L1 0 6300 6227 340 85 0 0 chr5 101957755 101957802 -101127730 + L1 LINE L1 4485 4531 -1615 196 337 84 0 chr5 101958466 101958549 -101126983 + MER5A DNA MER1_type 72 161 -28 1981 98 11 0 chr5 101958848 101959113 -101126419 + AluSp SINE Alu 26 293 -20 207 0 0 0 chr5 101959116 101959139 -101126393 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 39 38 0 0 chr5 101959321 101959374 -101126158 + AT_rich Low_complexity Low_complexity 1 53 0 190 211 0 70 chr5 101959554 101959611 -101125921 - L2 LINE L2 0 3313 3261 24 53 0 0 chr5 101961859 101961897 -101123635 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr5 101962668 101962703 -101122829 + AT_rich Low_complexity Low_complexity 1 35 0 1146 279 98 25 chr5 101962771 101963323 -101122209 - MLT1E LTR MaLR 0 593 2 258 316 53 76 chr5 101965241 101965412 -101120120 + MIR SINE MIR 5 171 -91 531 283 31 38 chr5 101965735 101965894 -101119638 - L2 LINE L2 0 3272 3115 182 347 28 0 chr5 101966058 101966130 -101119402 + MIR SINE MIR 182 255 -7 23 33 0 0 chr5 101966536 101966566 -101118966 + AT_rich Low_complexity Low_complexity 1 30 0 6652 67 1 7 chr5 101966663 101967821 -101117711 + L1PA7 LINE L1 5011 6164 0 2347 78 0 3 chr5 101968020 101968314 -101117218 + AluY SINE Alu 3 295 -16 22 70 0 0 chr5 101968485 101968528 -101117004 + AT_rich Low_complexity Low_complexity 1 43 0 279 167 133 0 chr5 101970345 101970405 -101115127 - L1ME4a LINE L1 -70 6051 5984 25 0 0 0 chr5 101970429 101970454 -101115078 + AT_rich Low_complexity Low_complexity 1 25 0 382 308 73 33 chr5 101970502 101970976 -101114556 - L1ME4a LINE L1 -295 5826 5338 842 258 113 33 chr5 101970977 101971343 -101114189 + MER57A LTR ERV1 4 401 -2 383 176 27 0 chr5 101971903 101971977 -101113555 - MLT1D LTR MaLR 0 505 430 1842 219 34 49 chr5 101971983 101972491 -101113041 - MLT1D LTR MaLR 0 505 6 1972 127 79 9 chr5 101972859 101973199 -101112333 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr5 101973209 101973233 -101112299 + AT_rich Low_complexity Low_complexity 1 24 0 38 0 0 0 chr5 101973440 101973478 -101112054 + AT_rich Low_complexity Low_complexity 1 38 0 654 320 161 25 chr5 101974100 101974683 -101110849 + L1MC/D LINE L1 2377 2880 -3266 2216 74 16 13 chr5 101974683 101974993 -101110539 - AluY SINE Alu 0 311 1 654 320 161 25 chr5 101974993 101975397 -101110135 + L1MC/D LINE L1 2880 3498 -2648 301 246 175 16 chr5 101975614 101975797 -101109735 + L1MC/D LINE L1 3729 3940 -2206 26 30 0 0 chr5 101976154 101976187 -101109345 + AT_rich Low_complexity Low_complexity 1 33 0 251 336 9 0 chr5 101976328 101976435 -101109097 + L1MC/D LINE L1 4491 4598 -1548 1350 276 52 2 chr5 101976948 101977369 -101108163 + L1MC/D LINE L1 5318 5759 -2049 258 32 0 0 chr5 101977527 101977558 -101107974 + (CA)n Simple_repeat Simple_repeat 2 32 0 1945 136 74 3 chr5 101977558 101977881 -101107651 - MER7A DNA MER2_type -2 344 1 1338 98 5 20 chr5 101978334 101978537 -101106995 - AluSg/x SINE Alu -6 306 107 1900 216 75 27 chr5 101978842 101979324 -101106208 - MLT1D LTR MaLR 0 505 1 206 284 0 18 chr5 101979777 101979886 -101105646 + T-rich Low_complexity Low_complexity 4 110 0 276 221 0 0 chr5 101980655 101980732 -101104800 + CT-rich Low_complexity Low_complexity 1 77 0 448 88 12 12 chr5 101981707 101981787 -101103745 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 2284 191 35 19 chr5 101982140 101982627 -101102905 - L1MD3 LINE L1 0 7995 7501 12442 218 36 13 chr5 101982715 101985069 -101100463 - L1PA16 LINE L1 -9 6860 4561 1897 167 0 0 chr5 101985069 101985363 -101100169 - AluSx SINE Alu -18 294 1 12442 218 36 13 chr5 101985363 101985628 -101099904 - L1PA16 LINE L1 -2308 4561 4304 192 40 0 0 chr5 101985628 101985653 -101099879 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 12442 218 36 13 chr5 101985653 101988897 -101096635 - L1PA16 LINE L1 -2565 4304 856 22 35 0 0 chr5 101989043 101989072 -101096460 + AT_rich Low_complexity Low_complexity 1 29 0 251 194 11 86 chr5 101989159 101989252 -101096280 + L1MA4A LINE L1 6204 6289 -14 10691 154 21 2 chr5 101989254 101990998 -101094534 - Tigger4(Zombi) DNA MER2_type -950 1781 5 726 158 15 30 chr5 101991153 101991286 -101094246 + AluJb SINE Alu 5 135 -177 4493 29 0 0 chr5 101991286 101991832 -101093700 - L1PA2 LINE L1 -826 5320 4775 7240 17 0 0 chr5 101991832 101992664 -101092868 + L1PA2 LINE L1 5321 6155 0 2498 36 0 7 chr5 101993014 101993317 -101092215 - AluY SINE Alu -10 301 1 302 274 168 0 chr5 101993336 101993431 -101092101 - MIR SINE MIR -62 146 36 3988 156 52 9 chr5 101993501 101994276 -101091256 - L1MC1 LINE L1 -6 6327 5520 389 70 0 18 chr5 101994376 101994433 -101091099 - L1MC1 LINE L1 -840 5493 5438 1786 57 0 4 chr5 101994433 101994663 -101090869 - L1PA5 LINE L1 -4 6150 5922 982 42 0 0 chr5 101994663 101994781 -101090751 + L1PA5 LINE L1 5807 5924 -230 * 3510 247 57 4 chr5 101994776 101996079 -101089453 - L1MC1 LINE L1 -743 5403 4063 618 307 66 16 chr5 102196424 102196933 -100888599 - MER45C DNA AcHobo -6 947 323 562 235 163 6 chr5 102196970 102197136 -100888396 - MER45C DNA AcHobo -740 213 22 396 237 188 39 chr5 102197137 102197344 -100888188 - MIR SINE MIR -10 252 15 2471 47 16 0 chr5 102197380 102197699 -100887833 + L1PA5 LINE L1 5831 6154 0 337 365 19 13 chr5 102198192 102198348 -100887184 - MIR SINE MIR -88 174 18 272 286 13 0 chr5 102198534 102198611 -100886921 - L2 LINE L2 -15 3298 3221 21 0 0 0 chr5 102199186 102199207 -100886325 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr5 102201724 102201752 -100883780 + (TC)n Simple_repeat Simple_repeat 1 28 0 258 81 0 0 chr5 102201752 102201789 -100883743 + (TA)n Simple_repeat Simple_repeat 1 37 0 30 45 0 0 chr5 102202137 102202181 -100883351 + AT_rich Low_complexity Low_complexity 1 44 0 25 65 0 0 chr5 102204351 102204397 -100881135 + AT_rich Low_complexity Low_complexity 1 46 0 782 204 120 0 chr5 102204399 102204624 -100880908 + L1MD2 LINE L1 6106 6357 -2 369 198 62 12 chr5 102206252 102206333 -100879199 + Zaphod DNA AcHobo 2659 2743 -1288 987 254 60 11 chr5 102206391 102206773 -100878759 + Zaphod DNA AcHobo 3621 4021 -10 2369 130 41 19 chr5 102206818 102207234 -100878298 + MSTA LTR MaLR 1 425 -3 196 286 0 83 chr5 102207389 102207473 -100878059 + L2 LINE L2 3184 3260 -12 1516 82 55 5 chr5 102207536 102207755 -100877777 + MER30 DNA MER1_type 1 230 0 22 94 0 0 chr5 102208022 102208086 -100877446 + AT_rich Low_complexity Low_complexity 1 64 0 1701 186 83 63 chr5 102208116 102208574 -100876958 + MLT1C LTR MaLR 1 467 0 189 0 0 0 chr5 102211373 102211394 -100874138 + (T)n Simple_repeat Simple_repeat 1 21 0 233 53 53 0 chr5 102213217 102213255 -100872277 + T-rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr5 102213865 102213893 -100871639 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 102214115 102214139 -100871393 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr5 102214895 102214940 -100870592 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr5 102215094 102215117 -100870415 + AT_rich Low_complexity Low_complexity 1 23 0 26 82 0 0 chr5 102215347 102215408 -100870124 + AT_rich Low_complexity Low_complexity 1 61 0 2204 98 7 3 chr5 102219514 102219810 -100865722 + AluSp SINE Alu 2 298 -15 2535 217 35 18 chr5 102219938 102220488 -100865044 - MER99 DNA DNA -3 825 261 2631 101 3 8 chr5 102220488 102220854 -100864678 + THE1B LTR MaLR 1 364 0 2535 217 35 18 chr5 102220854 102220926 -100864606 - MER99 DNA DNA -567 261 192 21 82 0 0 chr5 102221297 102221346 -100864186 + AT_rich Low_complexity Low_complexity 1 49 0 366 277 20 0 chr5 102221610 102221711 -100863821 - MER99 DNA DNA -724 104 2 24 32 0 0 chr5 102222351 102222382 -100863150 + AT_rich Low_complexity Low_complexity 1 31 0 651 227 175 52 chr5 102223638 102223832 -100861700 + MER58A DNA MER1_type 1 218 -6 634 313 11 0 chr5 102223849 102224031 -100861501 - MER5A DNA MER1_type -5 184 1 21 0 0 0 chr5 102225351 102225372 -100860160 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr5 102225479 102225517 -100860015 + AT_rich Low_complexity Low_complexity 1 38 0 186 319 143 0 chr5 102225564 102225655 -100859877 + MIR SINE MIR 35 138 -124 21 36 0 0 chr5 102226222 102226250 -100859282 + AT_rich Low_complexity Low_complexity 1 28 0 2290 53 16 16 chr5 102227276 102227580 -100857952 - AluY SINE Alu -7 304 1 26 74 0 0 chr5 102228946 102229000 -100856532 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr5 102232867 102232895 -100852637 + AT_rich Low_complexity Low_complexity 1 28 0 212 328 26 69 chr5 102233475 102233591 -100851941 + L2 LINE L2 3162 3272 0 1535 214 72 3 chr5 102233702 102233799 -100851733 - Charlie1 DNA MER1_type 0 2761 2672 11581 36 1 0 chr5 102233799 102235977 -100849555 + L1PA5 LINE L1 3972 6154 0 1535 214 72 3 chr5 102235977 102236267 -100849265 - Charlie1 DNA MER1_type -89 2672 2347 244 357 14 0 chr5 102236269 102236339 -100849193 - Charlie1 DNA MER1_type -2690 71 1 510 30 0 0 chr5 102236413 102236480 -100849052 + L1PA2 LINE L1 6089 6155 0 378 0 0 0 chr5 102236873 102236915 -100848617 + (TA)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr5 102237191 102237213 -100848319 + AT_rich Low_complexity Low_complexity 1 22 0 517 324 128 12 chr5 102237221 102237629 -100847903 + L1ME3A LINE L1 5431 5885 -285 21 36 0 0 chr5 102237665 102237693 -100847839 + AT_rich Low_complexity Low_complexity 1 28 0 201 147 0 0 chr5 102237987 102238021 -100847511 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr5 102240455 102240476 -100845056 + AT_rich Low_complexity Low_complexity 1 21 0 215 327 83 68 chr5 102240973 102241239 -100844293 - L2 LINE L2 -14 3299 3030 539 302 149 0 chr5 102241402 102241617 -100843915 - MIR SINE MIR -10 252 6 2294 99 0 0 chr5 102241687 102241990 -100843542 + AluSc SINE Alu 1 303 -6 364 267 176 24 chr5 102243557 102243767 -100841765 - MIR SINE MIR -14 248 7 211 268 0 18 chr5 102244027 102244083 -100841449 + MIR SINE MIR 99 153 -55 1719 149 51 7 chr5 102245928 102246102 -100839430 - AluJb SINE Alu -2 310 116 450 0 0 0 chr5 102246102 102246152 -100839380 + (TG)n Simple_repeat Simple_repeat 2 51 0 1719 149 51 7 chr5 102246152 102246272 -100839260 - AluJb SINE Alu -196 116 3 272 247 138 11 chr5 102246721 102246828 -100838704 + MIR SINE MIR 50 172 -36 768 247 56 9 chr5 102247391 102247613 -100837919 - MIR SINE MIR -2 260 31 520 352 88 11 chr5 102247758 102248110 -100837422 - L2 LINE L2 -1 3312 2934 230 269 17 25 chr5 102248274 102248393 -100837139 + L1M4 LINE L1 2221 2338 -3808 2114 80 17 14 chr5 102248499 102248788 -100836744 - AluY SINE Alu -21 290 1 801 296 125 16 chr5 102248838 102249735 -100835797 + L1M4 LINE L1 2457 3451 -2695 371 298 107 42 chr5 102249792 102250148 -100835384 - LTR16A1 LTR ERVL -70 387 9 1959 173 35 38 chr5 102251024 102251451 -100834081 + MSTB LTR MaLR 1 426 0 2432 61 0 3 chr5 102251626 102251937 -100833595 - AluY SINE Alu -1 310 1 1904 183 145 24 chr5 102252493 102252793 -100832739 + MLT1C LTR MaLR 1 366 -101 1306 216 85 26 chr5 102252793 102253145 -100832387 - MLT1A2 LTR MaLR -1 373 1 1904 183 145 24 chr5 102253145 102253259 -100832273 + MLT1C LTR MaLR 366 465 -2 325 352 84 40 chr5 102253419 102253669 -100831863 + L2 LINE L2 2695 2955 -359 304 261 67 55 chr5 102253709 102253874 -100831658 + L2 LINE L2 3083 3249 -64 1775 148 178 8 chr5 102254270 102254636 -100830896 - MSTA LTR MaLR 0 428 1 211 178 44 0 chr5 102255783 102255828 -100829704 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 202 294 0 0 chr5 102255796 102255864 -100829668 + A-rich Low_complexity Low_complexity 1 68 0 * 239 214 36 0 chr5 102257979 102258035 -100827497 + (CATA)n Simple_repeat Simple_repeat 2 59 0 382 325 26 52 chr5 102260068 102260262 -100825270 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr5 102260403 102260425 -100825107 + AT_rich Low_complexity Low_complexity 1 22 0 230 229 24 36 chr5 102260600 102260766 -100824766 + (TAA)n Simple_repeat Simple_repeat 2 165 0 5865 89 19 41 chr5 102260873 102261076 -100824456 + L1PA10 LINE L1 5288 5494 -674 261 0 0 0 chr5 102261076 102261105 -100824427 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 5865 89 19 41 chr5 102261105 102261798 -100823734 + L1PA10 LINE L1 5494 6164 -4 267 190 0 0 chr5 102261813 102261871 -100823661 + (TA)n Simple_repeat Simple_repeat 2 59 0 274 296 80 0 chr5 102261872 102261997 -100823535 + L1ME LINE L1 5612 5746 -375 25 51 0 0 chr5 102262003 102262042 -100823490 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr5 102262391 102262426 -100823106 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 102262530 102262565 -100822967 + AT_rich Low_complexity Low_complexity 1 35 0 227 273 0 0 chr5 102262780 102262835 -100822697 - L1ME LINE L1 -433 5737 5683 21 36 0 0 chr5 102263253 102263281 -100822251 + AT_rich Low_complexity Low_complexity 1 28 0 248 301 144 20 chr5 102264193 102264346 -100821186 - L2 LINE L2 -1077 2237 2066 267 272 58 10 chr5 102265696 102265799 -100819733 + MER103 DNA DNA 21 128 -38 1669 155 0 4 chr5 102266775 102267053 -100818479 - L1PA15 LINE L1 -1 6164 5888 545 208 71 36 chr5 102267057 102267225 -100818307 - L1MC3 LINE L1 -170 7615 7442 4403 111 45 0 chr5 102267239 102267904 -100817628 - L1PA8 LINE L1 0 6172 5478 2875 322 107 22 chr5 102268730 102270480 -100815052 - L2 LINE L2 0 3313 1405 2888 240 26 36 chr5 102270553 102271627 -100813905 - L1ME1 LINE L1 -48 6187 5124 953 229 24 10 chr5 102271624 102271916 -100813616 - L1ME1 LINE L1 -1408 4807 4512 * 4736 261 58 24 chr5 102271994 102275984 -100809548 - L1ME1 LINE L1 -1886 4329 22 469 229 41 0 chr5 102275992 102276114 -100809418 - L2 LINE L2 -1905 1409 1283 967 160 27 0 chr5 102276972 102277160 -100808372 - L1MA7 LINE L1 -1 6290 6098 5459 122 33 20 chr5 102277161 102278253 -100807279 + pTR5 LTR ERV1 743 1999 -439 351 238 32 44 chr5 102278253 102278386 -100807146 + LTR30 LTR ERV1 375 475 -94 1449 106 5 5 chr5 102278386 102278604 -100806928 + pTR5 LTR ERV1 177 394 -2044 897 200 10 26 chr5 102278607 102278802 -100806730 - L1MA7 LINE L1 -186 6105 5914 315 167 0 0 chr5 102281354 102281420 -100804112 + (TG)n Simple_repeat Simple_repeat 2 67 0 192 97 0 0 chr5 102282241 102282272 -100803260 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 216 97 0 0 chr5 102285739 102285770 -100799762 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 102287982 102288003 -100797529 + AT_rich Low_complexity Low_complexity 1 21 0 267 79 0 0 chr5 102288705 102288743 -100796789 + (TC)n Simple_repeat Simple_repeat 1 38 0 211 365 74 15 chr5 102290406 102290677 -100794855 + L2 LINE L2 1222 1508 -1806 225 0 0 0 chr5 102291003 102291028 -100794504 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 270 0 0 0 chr5 102292098 102292128 -100793404 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 2762 215 53 81 chr5 102293563 102294714 -100790818 + L1MB7 LINE L1 725 1843 -4541 423 255 0 0 chr5 102294732 102294838 -100790694 + L1MB7 LINE L1 4518 4623 -1759 1321 196 80 0 chr5 102294860 102295110 -100790422 - AluJo SINE Alu -30 282 13 3764 211 66 4 chr5 102295113 102296806 -100788726 + L1MB7 LINE L1 4612 6404 -16 401 257 118 26 chr5 102296831 102296983 -100788549 + MLT1I LTR MaLR 244 409 0 865 126 0 0 chr5 102297033 102297160 -100788372 + AluSg/x SINE Alu 147 273 -39 237 276 127 45 chr5 102298116 102298250 -100787282 + L2 LINE L2 2707 2851 -463 272 232 61 37 chr5 102298304 102298386 -100787146 + L2 LINE L2 2969 3052 -261 510 220 95 24 chr5 102299413 102299581 -100785951 - MER104 DNA Tc2 0 180 1 24 0 0 0 chr5 102299614 102299638 -100785894 + AT_rich Low_complexity Low_complexity 1 24 0 286 294 59 0 chr5 102300183 102300285 -100785247 + MIR SINE MIR 81 188 -74 287 250 32 8 chr5 102300347 102300432 -100785100 + (TA)n Simple_repeat Simple_repeat 1 91 -36 2790 88 0 5 chr5 102300432 102300807 -100784725 - THE1C LTR MaLR 0 375 3 287 250 32 8 chr5 102300807 102300845 -100784687 + (TA)n Simple_repeat Simple_repeat 91 127 0 24 67 0 0 chr5 102302093 102302138 -100783394 + AT_rich Low_complexity Low_complexity 1 45 0 241 260 14 0 chr5 102303063 102303136 -100782396 + L2 LINE L2 2203 2276 -1038 745 345 117 33 chr5 102303479 102303849 -100781683 - L2 LINE L2 -146 3167 2830 818 202 22 0 chr5 102303849 102304032 -100781500 + MER53 DNA DNA 1 187 -2 745 345 117 33 chr5 102304032 102304421 -100781111 - L2 LINE L2 -483 2830 2349 1802 244 75 17 chr5 102304421 102304954 -100780578 - L1MB8 LINE L1 -12 6166 5603 577 336 70 0 chr5 102304978 102305219 -100780313 - L2 LINE L2 -998 2316 2059 910 282 112 46 chr5 102305523 102305959 -100779573 - L2 LINE L2 -1415 1899 1435 246 345 25 25 chr5 102305997 102306116 -100779416 - L3 LINE CR1 -98 1479 1361 225 0 0 0 chr5 102306377 102306402 -100779130 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 36 0 0 chr5 102308275 102308303 -100777229 + AT_rich Low_complexity Low_complexity 1 28 0 430 288 65 20 chr5 102309979 102310132 -100775400 - MLT1J LTR MaLR -10 501 342 348 250 0 0 chr5 102310168 102310248 -100775284 + MIR SINE MIR 60 139 -123 328 317 0 10 chr5 102310506 102310610 -100774922 + MIR SINE MIR 158 260 -2 680 273 163 32 chr5 102310643 102310925 -100774607 - MLT1J LTR MaLR -190 321 3 189 303 76 0 chr5 102311495 102311561 -100773971 + L2 LINE L2 2917 2987 -285 264 307 120 47 chr5 102312020 102312170 -100773362 + MIR SINE MIR 86 246 -16 432 339 105 25 chr5 102312606 102312845 -100772687 - L3 LINE CR1 -760 817 560 22 0 0 0 chr5 102312845 102312867 -100772665 + AT_rich Low_complexity Low_complexity 1 22 0 386 348 59 37 chr5 102313562 102313967 -100771565 + L2 LINE L2 1928 2341 -973 250 260 29 77 chr5 102314005 102314109 -100771423 - L2 LINE L2 0 3272 3174 238 314 90 70 chr5 102314127 102314518 -100771014 + L2 LINE L2 2678 3073 -199 390 291 7 33 chr5 102314659 102314810 -100770722 + LTR41 LTR ERVL 1 147 -626 363 262 203 23 chr5 102315058 102315314 -100770218 + LTR50 LTR ERVL 494 795 0 406 323 92 0 chr5 102315774 102315938 -100769594 - MLT1J2 LTR MaLR -74 376 198 220 318 56 9 chr5 102316429 102316536 -100768996 - MIR SINE MIR 0 262 151 353 320 88 50 chr5 102317020 102317339 -100768193 + L2 LINE L2 2852 3182 -131 1375 276 127 10 chr5 102317487 102317968 -100767564 - MLT1H1 LTR MaLR -2 553 17 1036 167 23 6 chr5 102318676 102318850 -100766682 + AluJo SINE Alu 71 247 -65 217 225 0 0 chr5 102318873 102318913 -100766619 + MIR SINE MIR 210 249 -13 353 260 10 0 chr5 102319293 102319397 -100766135 - L1ME3A LINE L1 -10 6160 6056 32 0 0 0 chr5 102319404 102319436 -100766096 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 102320954 102320983 -100764549 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 102321083 102321104 -100764428 + AT_rich Low_complexity Low_complexity 1 21 0 1366 65 38 0 chr5 102321306 102321491 -100764041 + L1PA5 LINE L1 5963 6154 0 30 59 0 0 chr5 102323057 102323108 -100762424 + AT_rich Low_complexity Low_complexity 1 51 0 23 68 0 0 chr5 102323620 102323664 -100761868 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 102323686 102323712 -100761820 + AT_rich Low_complexity Low_complexity 1 26 0 26 98 0 0 chr5 102324938 102325020 -100760512 + AT_rich Low_complexity Low_complexity 1 82 0 284 309 62 0 chr5 102325217 102325314 -100760218 - MIR SINE MIR -6 256 154 308 295 33 55 chr5 102325397 102325580 -100759952 - L2 LINE L2 -15 3298 3120 23 33 0 0 chr5 102325587 102325617 -100759915 + AT_rich Low_complexity Low_complexity 1 30 0 614 268 44 49 chr5 102326031 102326236 -100759296 - MIR SINE MIR -1 261 58 493 326 72 14 chr5 102326508 102326729 -100758803 + MIR SINE MIR 3 236 -26 188 67 33 0 chr5 102326892 102326922 -100758610 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2197 99 0 0 chr5 102328117 102328410 -100757122 - AluSg SINE Alu -17 293 1 467 284 31 0 chr5 102329628 102329755 -100755777 + L2 LINE L2 3169 3299 -14 1335 184 80 27 chr5 102330306 102330642 -100754890 - MLT1A1 LTR MaLR 0 365 12 1598 90 161 4 chr5 102330902 102331157 -100754375 + AluSg1 SINE Alu 1 295 -14 269 352 51 56 chr5 102331267 102331463 -100754069 + MIR3 SINE MIR 12 206 -2 206 136 23 0 chr5 102333069 102333113 -100752419 + CT-rich Low_complexity Low_complexity 4 48 0 1986 62 36 11 chr5 102335700 102336018 -100749514 + AluY SINE Alu 1 325 0 21 0 0 0 chr5 102336314 102336335 -100749197 + AT_rich Low_complexity Low_complexity 1 21 0 1619 139 0 0 chr5 102336477 102336707 -100748825 + AluSx SINE Alu 3 232 -80 6869 63 9 0 chr5 102337171 102338058 -100747474 + L1PA7 LINE L1 5256 6150 -4 25 0 0 0 chr5 102338060 102338085 -100747447 + AT_rich Low_complexity Low_complexity 1 25 0 231 355 33 26 chr5 102338226 102338378 -100747154 - L2 LINE L2 0 3313 3161 412 391 88 16 chr5 102338574 102338947 -100746585 - L2 LINE L2 -455 2859 2460 231 320 40 24 chr5 102340354 102340479 -100745053 - MER94 DNA DNA -7 127 1 22 0 0 0 chr5 102342693 102342715 -100742817 + AT_rich Low_complexity Low_complexity 1 22 0 569 301 10 26 chr5 102343574 102343767 -100741765 + MIR SINE MIR 71 260 -2 369 0 0 0 chr5 102344956 102344997 -100740535 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr5 102346538 102346559 -100738973 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 102347678 102347709 -100737823 + AT_rich Low_complexity Low_complexity 1 31 0 611 255 78 29 chr5 102348239 102348443 -100737089 - L2 LINE L2 -5 3308 3095 240 35 0 0 chr5 102349129 102349158 -100736374 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 102349839 102349860 -100735672 + AT_rich Low_complexity Low_complexity 1 21 0 220 297 110 22 chr5 102350813 102350904 -100734628 - L2 LINE L2 -2 3270 3172 895 133 40 0 chr5 102351017 102351168 -100734364 + L1MA4A LINE L1 6009 6165 -138 227 135 0 0 chr5 102351164 102351201 -100734331 - L1MA4 LINE L1 -71 6229 6193 * 333 163 7 7 chr5 102351189 102351261 -100734271 + L1MA4A LINE L1 6145 6219 -84 553 99 50 0 chr5 102351327 102351428 -100734104 + L1MA4A LINE L1 6193 6298 -5 211 209 0 0 chr5 102351930 102351973 -100733559 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 2213 101 0 7 chr5 102354879 102355177 -100730355 - AluSx SINE Alu -16 296 1 571 261 133 17 chr5 102356323 102356564 -100728968 - L2 LINE L2 0 3313 3045 209 208 14 0 chr5 102356744 102356816 -100728716 + (TA)n Simple_repeat Simple_repeat 2 74 0 30 0 0 0 chr5 102362778 102362808 -100722724 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 102362954 102362977 -100722555 + AT_rich Low_complexity Low_complexity 1 23 0 291 28 0 0 chr5 102363011 102363047 -100722485 + (TG)n Simple_repeat Simple_repeat 2 37 0 243 125 0 0 chr5 102363047 102363087 -100722445 + (TA)n Simple_repeat Simple_repeat 2 41 0 24 67 0 0 chr5 102364381 102364426 -100721106 + AT_rich Low_complexity Low_complexity 1 45 0 3933 293 132 24 chr5 102364561 102366247 -100719285 + L2 LINE L2 1030 2970 -343 1704 140 94 26 chr5 102366247 102366598 -100718934 - THE1C LTR MaLR 0 375 1 3933 293 132 24 chr5 102366598 102366983 -100718549 + L2 LINE L2 2970 3312 -1 27 29 0 0 chr5 102367008 102367042 -100718490 + AT_rich Low_complexity Low_complexity 1 34 0 395 326 36 52 chr5 102367607 102367914 -100717618 + HAL1 LINE L1 623 924 -1583 2221 114 3 0 chr5 102368253 102368560 -100716972 + AluSp SINE Alu 5 312 -1 22 56 0 0 chr5 102368819 102368855 -100716677 + AT_rich Low_complexity Low_complexity 1 36 0 2451 142 34 7 chr5 102368922 102369339 -100716193 - MSTA LTR MaLR 0 428 1 25 51 0 0 chr5 102369432 102369471 -100716061 + AT_rich Low_complexity Low_complexity 1 39 0 244 252 28 23 chr5 102369520 102369642 -100715890 + L1ME LINE L1 179 304 -5901 351 330 45 42 chr5 102370176 102370840 -100714692 + L1ME LINE L1 786 1451 -4945 912 231 84 30 chr5 102370855 102371064 -100714468 + L1ME3A LINE L1 5816 6051 -119 1861 108 16 56 chr5 102371064 102371370 -100714162 - AluSc SINE Alu -11 298 5 912 231 84 30 chr5 102371370 102371493 -100714039 + L1ME3A LINE L1 6051 6166 -4 22 0 0 0 chr5 102371646 102371668 -100713864 + AT_rich Low_complexity Low_complexity 1 22 0 1038 240 117 34 chr5 102372538 102372707 -100712825 + MLT1J LTR MaLR 2 156 -355 2008 135 3 0 chr5 102372707 102372996 -100712536 + AluSx SINE Alu 3 292 -20 1038 240 117 34 chr5 102372996 102373297 -100712235 + MLT1J LTR MaLR 156 511 0 587 271 82 78 chr5 102374490 102374809 -100710723 + MLT1H LTR MaLR 73 396 -153 2114 130 9 32 chr5 102374809 102375154 -100710378 + MER1B DNA MER1_type 1 337 0 587 271 82 78 chr5 102375154 102375307 -100710225 + MLT1H LTR MaLR 396 547 -2 22 0 0 0 chr5 102376052 102376074 -100709458 + AT_rich Low_complexity Low_complexity 1 22 0 548 276 70 58 chr5 102376992 102377249 -100708283 - MER102b DNA MER1_type -1 340 81 219 36 0 0 chr5 102377268 102377296 -100708236 + (CA)n Simple_repeat Simple_repeat 1 28 0 493 229 34 0 chr5 102377432 102377550 -100707982 - MER20 DNA MER1_type -49 170 49 623 275 9 68 chr5 102377595 102377817 -100707715 + MIR SINE MIR 48 256 -6 820 202 111 5 chr5 102378620 102378818 -100706714 + MER20 DNA MER1_type 1 219 0 622 323 78 1 chr5 102378938 102379147 -100706385 + MIR SINE MIR 21 241 -21 26 88 0 0 chr5 102380839 102380907 -100704625 + AT_rich Low_complexity Low_complexity 1 68 0 240 189 38 0 chr5 102381003 102381056 -100704476 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 2628 196 15 15 chr5 102381242 102381789 -100703743 - L1MB2 LINE L1 -27 6144 5598 587 179 14 43 chr5 102381770 102381910 -100703622 - L1MB2 LINE L1 -2155 3991 3856 * 402 69 0 0 chr5 102381924 102381982 -100703550 - L1PA8 LINE L1 0 6172 6115 8601 92 6 2 chr5 102382010 102383257 -100702275 - L1P LINE L1 -2741 3405 2154 21 0 0 0 chr5 102383392 102383413 -100702119 + AT_rich Low_complexity Low_complexity 1 21 0 235 242 123 41 chr5 102383529 102383731 -100701801 - L1 LINE L1 -1512 4634 4407 971 235 55 69 chr5 102383731 102384110 -100701422 - MLT1A2 LTR MaLR 0 374 1 235 242 123 41 chr5 102384110 102384151 -100701381 - L1 LINE L1 -1739 4407 4371 1526 157 4 15 chr5 102384460 102384727 -100700805 + AluSx SINE Alu 1 264 -48 604 133 0 18 chr5 102384742 102384855 -100700677 + (GGAA)n Simple_repeat Simple_repeat 2 112 0 2580 195 11 4 chr5 102385299 102385766 -100699766 + MER70A LTR ERVL 3 472 0 258 218 39 64 chr5 102385833 102385911 -100699621 - L2 LINE L2 -4 3309 3234 198 0 0 0 chr5 102386242 102386264 -100699268 + (GCTTG)n Simple_repeat Simple_repeat 2 23 0 436 304 64 0 chr5 102386966 102387091 -100698441 + L2 LINE L2 3173 3305 -8 4156 87 2 0 chr5 102387267 102387820 -100697712 - MER41A LTR ERV1 0 554 1 186 43 0 0 chr5 102388131 102388154 -100697378 + (TA)n Simple_repeat Simple_repeat 2 24 0 312 222 96 52 chr5 102388336 102388471 -100697061 + MIR SINE MIR 122 262 0 21 36 0 0 chr5 102388560 102388588 -100696944 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 102389464 102389493 -100696039 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr5 102390311 102390342 -100695190 + AT_rich Low_complexity Low_complexity 1 31 0 182 206 143 32 chr5 102391096 102391159 -100694373 - MIR SINE MIR -104 104 35 487 178 0 20 chr5 102391891 102391992 -100693540 + FLAM_A SINE Alu 39 137 -5 33 25 0 0 chr5 102392993 102393033 -100692499 + AT_rich Low_complexity Low_complexity 1 40 0 207 356 103 0 chr5 102393033 102393120 -100692412 - MIR SINE MIR -133 129 34 244 250 16 0 chr5 102393890 102393954 -100691578 + T-rich Low_complexity Low_complexity 1 65 0 445 144 19 19 chr5 102393981 102394085 -100691447 + CT-rich Low_complexity Low_complexity 2 105 0 24 0 0 0 chr5 102394172 102394196 -100691336 + AT_rich Low_complexity Low_complexity 1 24 0 31 44 0 0 chr5 102397061 102397106 -100688426 + AT_rich Low_complexity Low_complexity 1 45 0 340 279 8 70 chr5 102397848 102397977 -100687555 - L2 LINE L2 0 3272 3152 1186 261 37 28 chr5 102398006 102398462 -100687070 - MER90 LTR ERV1 -13 601 65 265 311 133 44 chr5 102398597 102398693 -100686839 - L2 LINE L2 -245 3068 2982 2269 97 0 7 chr5 102398693 102399003 -100686529 + AluSc SINE Alu 2 309 0 265 311 133 44 chr5 102399003 102399221 -100686311 - L2 LINE L2 -331 2982 2740 2032 174 34 8 chr5 102399319 102399699 -100685833 + MLT1B LTR MaLR 1 390 0 404 299 176 15 chr5 102400732 102400993 -100684539 - L2 LINE L2 0 3313 3011 30 27 0 0 chr5 102401035 102401072 -100684460 + AT_rich Low_complexity Low_complexity 1 37 0 506 202 104 127 chr5 102401147 102401320 -100684212 - MER45A DNA AcHobo -9 169 1 221 269 141 26 chr5 102401660 102401738 -100683794 + L2 LINE L2 3138 3224 -48 2033 134 3 3 chr5 102402528 102402827 -100682705 + AluSq SINE Alu 1 299 -14 890 95 17 28 chr5 102403043 102403222 -100682310 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 297 0 0 0 chr5 102403222 102403255 -100682277 + (GGAGA)n Simple_repeat Simple_repeat 1 33 0 2004 106 3 3 chr5 102403693 102403997 -100681535 - AluSg SINE Alu 0 304 1 21 0 0 0 chr5 102405006 102405027 -100680505 + AT_rich Low_complexity Low_complexity 1 21 0 261 367 43 14 chr5 102405572 102405711 -100679821 - L2 LINE L2 -1 3271 3129 320 294 46 18 chr5 102406883 102406992 -100678540 + L2 LINE L2 3200 3311 -2 752 245 167 5 chr5 102407320 102407536 -100677996 + MIR SINE MIR 12 262 0 33 56 0 0 chr5 102407688 102407742 -100677790 + AT_rich Low_complexity Low_complexity 1 54 0 359 325 73 68 chr5 102408111 102408218 -100677314 + L1M4 LINE L1 4885 4990 -1156 1980 148 0 0 chr5 102408218 102408509 -100677023 - AluSx SINE Alu -15 297 7 359 325 73 68 chr5 102408509 102408755 -100676777 + L1M4 LINE L1 4990 5240 -906 261 216 60 67 chr5 102408784 102408918 -100676614 + L1M LINE L1 5270 5402 -768 246 32 0 0 chr5 102409457 102409488 -100676044 + (TG)n Simple_repeat Simple_repeat 2 32 0 1198 249 66 21 chr5 102409563 102409988 -100675544 - L1MB8 LINE L1 -1 6177 5734 330 245 3 8 chr5 102410008 102410093 -100675439 + HAL1b LINE L1 1227 1306 -42 252 198 37 12 chr5 102410467 102410548 -100674984 + (TA)n Simple_repeat Simple_repeat 2 84 0 756 169 84 0 chr5 102411104 102411246 -100674286 - Tigger1 DNA MER2_type -2233 185 32 1993 119 3 23 chr5 102411502 102411812 -100673720 + AluSg SINE Alu 1 304 -6 1551 177 67 51 chr5 102411859 102412249 -100673283 - MSTD LTR MaLR 0 396 1 331 316 151 0 chr5 102413946 102414098 -100671434 + MIR SINE MIR 88 262 0 2204 97 3 3 chr5 102414246 102414554 -100670978 - AluSg SINE Alu -2 308 1 394 271 0 73 chr5 102415991 102416142 -100669390 - MER117 DNA MER1_type -40 157 18 251 225 14 0 chr5 102416363 102416434 -100669098 + GA-rich Low_complexity Low_complexity 2 73 0 2286 197 47 20 chr5 102416465 102416533 -100668999 - MLT1D LTR MaLR 0 505 440 2309 95 0 0 chr5 102416533 102416828 -100668704 + AluSg SINE Alu 3 297 -13 2286 197 47 20 chr5 102416828 102417251 -100668281 - MLT1D LTR MaLR -65 440 1 482 287 36 84 chr5 102417372 102417623 -100667909 + MIR SINE MIR 3 241 -21 45 34 0 0 chr5 102418722 102418781 -100666751 + AT_rich Low_complexity Low_complexity 1 59 0 452 176 24 0 chr5 102419399 102419484 -100666048 + FLAM_A SINE Alu 11 97 -45 222 37 0 0 chr5 102419484 102419511 -100666021 + (GA)n Simple_repeat Simple_repeat 2 28 0 48 98 0 0 chr5 102419531 102419684 -100665848 + AT_rich Low_complexity Low_complexity 1 153 0 370 263 0 0 chr5 102419888 102419968 -100665564 - MER117 DNA MER1_type -117 80 1 252 281 60 78 chr5 102420202 102420419 -100665113 - L2 LINE L2 -4 3309 3097 1300 293 20 45 chr5 102420447 102421004 -100664528 + L1MCb LINE L1 14 556 -5489 941 255 64 13 chr5 102421100 102421398 -100664134 + L1MCb LINE L1 570 882 -5163 756 125 3 7 chr5 102421398 102421517 -100664015 - MSTA LTR MaLR 0 428 314 1015 173 107 29 chr5 102421576 102421833 -100663699 - MSTA LTR MaLR -76 292 46 340 193 23 0 chr5 102421843 102421931 -100663601 + L1MCb LINE L1 877 966 -5079 1148 203 21 63 chr5 102421941 102422276 -100663256 + LTR29 LTR ERV1 12 332 -290 730 174 192 0 chr5 102422339 102422506 -100663026 + LTR51 LTR ERV1 130 328 -343 1004 174 64 38 chr5 102422507 102422742 -100662790 + LTR48B LTR ERV1 404 644 0 1404 199 32 136 chr5 102422744 102423062 -100662470 + LTR48B-int LTR ERV1 1 351 -7186 2996 143 77 63 chr5 102423062 102423393 -100662139 + LTR51 LTR ERV1 1 326 -345 2235 113 0 0 chr5 102423393 102423702 -100661830 - AluY SINE Alu -2 309 1 2996 143 77 63 chr5 102423702 102424032 -100661500 + LTR51 LTR ERV1 326 671 0 1404 199 32 136 chr5 102424032 102424330 -100661202 + LTR48B-int LTR ERV1 351 2064 -5473 333 109 0 0 chr5 102424367 102424413 -100661119 - MER31-int LTR ERV1 -963 3973 3928 2136 262 50 57 chr5 102424444 102425292 -100660240 + LTR48B-int LTR ERV1 448 1289 -5042 350 255 9 19 chr5 102425353 102425459 -100660073 + LTR48B-int LTR ERV1 1288 1392 -4939 192 40 0 0 chr5 102426020 102426045 -100659487 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 953 252 73 8 chr5 102426170 102426416 -100659116 + LTR48B-int LTR ERV1 1792 2053 -4278 * 4721 201 71 59 chr5 102426415 102427996 -100657536 + LTR48B-int LTR ERV1 4858 6167 -164 2359 209 76 20 chr5 102428101 102428691 -100656841 + LTR48B LTR ERV1 2 624 -20 1349 252 110 56 chr5 102428691 102429754 -100655778 + L1MCb LINE L1 1677 2681 -3883 2178 105 0 0 chr5 102429754 102430049 -100655483 + AluSc SINE Alu 6 300 -9 1349 252 110 56 chr5 102430049 102430127 -100655405 + L1MCb LINE L1 2681 2753 -3811 708 194 0 22 chr5 102430127 102430261 -100655271 + FLAM_C SINE Alu 1 131 -2 1349 252 110 56 chr5 102430261 102430703 -100654829 + L1MCb LINE L1 2753 3195 -3369 2979 228 27 35 chr5 102430774 102430840 -100654692 + L1MCb LINE L1 3940 4005 -2559 2333 69 10 0 chr5 102430840 102431145 -100654387 - AluY SINE Alu -3 308 1 2979 228 27 35 chr5 102431145 102431424 -100654108 + L1MCb LINE L1 4005 4285 -2279 1789 204 76 8 chr5 102431424 102431821 -100653711 + MSTB LTR MaLR 1 424 -2 2979 228 27 35 chr5 102431821 102432319 -100653213 + L1MCb LINE L1 4285 4777 -1787 1350 252 47 32 chr5 102432354 102432549 -100652983 - L1M4 LINE L1 -1224 4922 4731 1807 137 14 90 chr5 102432549 102432914 -100652618 - MER1B DNA MER1_type 0 337 1 1350 252 47 32 chr5 102432914 102433250 -100652282 - L1M4 LINE L1 -1415 4731 4383 1284 209 25 9 chr5 102433255 102433571 -100651961 - L1M4 LINE L1 -609 5835 5515 550 158 42 0 chr5 102433575 102433670 -100651862 + MSTC LTR MaLR 1 99 -329 4102 256 88 39 chr5 102433702 102435277 -100650255 + MST-int LTR MaLR 1 1651 0 3089 132 2 0 chr5 102435321 102435799 -100649733 - L1PA13 LINE L1 -8 6155 5677 17196 196 14 10 chr5 102435799 102439392 -100646140 - L1PA13 LINE L1 -1026 5120 1515 4595 230 38 23 chr5 102439396 102440960 -100644572 - L1M4 LINE L1 -1388 5018 3471 5090 182 22 33 chr5 102440981 102442044 -100643488 - MER11C LTR ERVK 0 1071 21 1619 176 11 0 chr5 102442062 102442323 -100643209 - AluJo SINE Alu -48 264 1 2367 228 31 25 chr5 102442331 102442966 -100642566 - L1M4 LINE L1 -2931 3475 2834 2005 142 28 3 chr5 102442966 102443326 -100642206 + L1MA4 LINE L1 5928 6296 -4 2367 228 31 25 chr5 102443326 102443474 -100642058 - L1M4 LINE L1 -3572 2834 2688 597 281 109 30 chr5 102443460 102443827 -100641705 - L1M4 LINE L1 -5241 1168 773 * 1526 153 113 0 chr5 102445256 102445538 -100639994 + MER7A DNA MER2_type 1 312 -34 182 403 75 19 chr5 102445600 102445759 -100639773 - MIR3 SINE MIR -38 170 3 45 75 0 0 chr5 102446654 102446748 -100638784 + AT_rich Low_complexity Low_complexity 1 94 0 30 27 0 0 chr5 102451827 102451864 -100633668 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 102453183 102453214 -100632318 + AT_rich Low_complexity Low_complexity 1 31 0 48 18 0 0 chr5 102453316 102453371 -100632161 + AT_rich Low_complexity Low_complexity 1 55 0 270 338 36 36 chr5 102456948 102457150 -100628382 + MIR SINE MIR 19 215 -47 230 231 19 19 chr5 102458094 102458198 -100627334 + GA-rich Low_complexity Low_complexity 3 106 0 209 386 30 0 chr5 102458581 102458682 -100626850 - MIR SINE MIR -65 143 40 184 300 0 0 chr5 102459513 102459563 -100625969 - L2 LINE L2 -9 3304 3255 * 458 288 8 8 chr5 102459561 102459679 -100625853 - MIR SINE MIR -102 160 43 45 0 0 0 chr5 102459934 102459979 -100625553 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 102460011 102460033 -100625499 + AT_rich Low_complexity Low_complexity 1 22 0 2529 272 111 6 chr5 102460324 102461192 -100624340 + L1MEc LINE L1 24 982 -5414 226 326 41 0 chr5 102461235 102461333 -100624199 + L1MEc LINE L1 1127 1228 -4990 * 2200 273 17 26 chr5 102461330 102462025 -100623507 + L1ME1 LINE L1 5473 6161 -5 26 30 0 0 chr5 102462408 102462441 -100623091 + AT_rich Low_complexity Low_complexity 1 33 0 243 370 44 15 chr5 102462755 102462890 -100622642 + L2 LINE L2 2619 2757 -557 204 345 129 17 chr5 102463032 102463148 -100622384 - L2 LINE L2 -619 2695 2567 626 224 88 133 chr5 102463325 102463773 -100621759 + MER52A LTR ERV1 1 1232 -130 732 286 79 24 chr5 102463926 102464367 -100621165 - LTR33 LTR ERVL -8 513 3 482 313 56 11 chr5 102464542 102464721 -100620811 + MER5A DNA MER1_type 3 189 0 21 82 0 0 chr5 102465565 102465614 -100619918 + AT_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr5 102465716 102465747 -100619785 + AT_rich Low_complexity Low_complexity 1 31 0 469 241 43 75 chr5 102465756 102465943 -100619589 - MIR SINE MIR -16 246 66 211 312 11 43 chr5 102465947 102466040 -100619492 - MIR SINE MIR -121 141 52 21 0 0 0 chr5 102466637 102466658 -100618874 + AT_rich Low_complexity Low_complexity 1 21 0 187 293 79 79 chr5 102466691 102466920 -100618612 - L2 LINE L2 -2462 852 624 3109 149 91 10 chr5 102467707 102468303 -100617229 - LTR9B LTR ERV1 0 644 1 1601 156 4 0 chr5 102468631 102468901 -100616631 + L1PA16 LINE L1 5895 6165 -1 1553 111 18 0 chr5 102469163 102469389 -100616143 - L1PA10 LINE L1 -8 6160 5931 2603 97 58 21 chr5 102469389 102469821 -100615711 + LTR7 LTR ERV1 1 448 -2 16754 98 33 19 chr5 102469823 102473021 -100612511 + HERVH LTR ERV1 1 2995 -4718 937 128 20 0 chr5 102473000 102473148 -100612384 + HERVH LTR ERV1 3140 3290 -4423 * 3354 111 4 6 chr5 102473138 102473641 -100611891 + HERVH LTR ERV1 3492 3993 -3720 4237 139 0 31 chr5 102473643 102474326 -100611206 + HERVH LTR ERV1 4488 5149 -2564 1398 119 18 9 chr5 102474327 102474545 -100610987 + HERVH LTR ERV1 5600 5819 -1894 * 1802 87 62 0 chr5 102474543 102474818 -100610714 + HERVH LTR ERV1 7322 7613 -100 22421 171 49 18 chr5 102474818 102474916 -100610616 - L1PA10 LINE L1 -233 6250 6157 2649 90 58 21 chr5 102474916 102475348 -100610184 + LTR7 LTR ERV1 1 448 -2 22421 171 49 18 chr5 102475348 102480136 -100605396 - L1PA10 LINE L1 -326 6157 1181 207 0 0 0 chr5 102480136 102480159 -100605373 + (TTG)n Simple_repeat Simple_repeat 1 23 0 22421 171 49 18 chr5 102480159 102481369 -100604163 - L1PA10 LINE L1 -5302 1181 10 195 256 0 77 chr5 102481724 102481802 -100603730 + MIR SINE MIR 10 81 -181 276 257 89 30 chr5 102481860 102481961 -100603571 + MIR SINE MIR 104 210 -52 845 230 68 23 chr5 102482837 102483109 -100602423 + MIR SINE MIR 7 259 -3 1554 147 0 0 chr5 102484784 102485022 -100600510 + AluSg/x SINE Alu 72 309 -3 324 244 87 55 chr5 102485452 102485706 -100599826 + L1ME LINE L1 5574 5835 -286 222 231 0 0 chr5 102486130 102486182 -100599350 + T-rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr5 102487985 102488020 -100597512 + AT_rich Low_complexity Low_complexity 1 35 0 621 308 115 40 chr5 102488311 102488863 -100596669 - L1ME4a LINE L1 -6 6115 5517 858 336 74 24 chr5 102492995 102493534 -100591998 + ERVL LTR ERVL 3694 4259 -1505 195 283 0 0 chr5 102494203 102494249 -100591283 - L3 LINE CR1 -14 1563 1518 334 291 91 9 chr5 102494782 102494892 -100590640 - L2 LINE L2 -3 3310 3192 243 284 60 60 chr5 102500140 102500256 -100585276 + L2 LINE L2 3181 3296 -17 598 95 9 9 chr5 102500305 102500410 -100585122 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 24 32 0 0 chr5 102500603 102500634 -100584898 + AT_rich Low_complexity Low_complexity 1 31 0 284 0 28 0 chr5 102501138 102501174 -100584358 + (GTTTG)n Simple_repeat Simple_repeat 2 38 0 1294 203 13 47 chr5 102502745 102503045 -100582487 - AluJo SINE Alu -22 290 1 723 218 68 0 chr5 102504070 102504217 -100581315 + AluJb SINE Alu 135 291 -21 38 51 0 0 chr5 102506852 102506911 -100578621 + AT_rich Low_complexity Low_complexity 1 59 0 2235 69 69 0 chr5 102508291 102508581 -100576951 - AluY SINE Alu -1 310 1 212 224 13 53 chr5 102508694 102508770 -100576762 + (TATATG)n Simple_repeat Simple_repeat 1 73 0 1486 95 134 24 chr5 102511239 102511492 -100574040 + AluY SINE Alu 1 281 -30 1733 79 0 36 chr5 102511704 102511956 -100573576 + AluSc SINE Alu 66 308 -1 334 200 22 22 chr5 102512223 102512313 -100573219 + LTR67 LTR ERVL 468 557 0 2024 109 14 0 chr5 102512508 102512691 -100572841 - AluSg SINE Alu 0 308 118 405 0 0 0 chr5 102512691 102512736 -100572796 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2024 109 14 0 chr5 102512736 102512856 -100572676 - AluSg SINE Alu -190 118 1 1152 189 0 34 chr5 102514227 102514479 -100571053 - AluJb SINE Alu 0 329 85 12726 168 28 82 chr5 102514584 102516246 -100569286 - L1MA6 LINE L1 0 6942 5190 1974 170 0 0 chr5 102516246 102516557 -100568975 - AluSx SINE Alu -1 311 1 12726 168 28 82 chr5 102516557 102519375 -100566157 - L1MA6 LINE L1 -1752 5190 2724 573 288 6 6 chr5 102519367 102519537 -100565995 - L1 LINE L1 -3488 2658 2489 * 4418 273 72 61 chr5 102519542 102522528 -100563004 - L1MA6 LINE L1 -4075 2713 3 186 133 0 0 chr5 102522637 102522667 -100562865 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 222 105 0 0 chr5 102523390 102523428 -100562104 + (CA)n Simple_repeat Simple_repeat 1 38 0 1990 85 0 42 chr5 102524131 102524414 -100561118 - AluSg SINE Alu 0 310 40 22 0 0 0 chr5 102527279 102527301 -100558231 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr5 102528502 102528528 -100557004 + (TTA)n Simple_repeat Simple_repeat 2 27 0 283 289 13 13 chr5 102530922 102530998 -100554534 - L2 LINE L2 -4 3268 3193 21 0 0 0 chr5 102532461 102532482 -100553050 + AT_rich Low_complexity Low_complexity 1 21 0 1644 225 78 12 chr5 102533548 102534050 -100551482 - L1M4 LINE L1 -3290 2856 2322 1485 217 121 17 chr5 102534373 102534779 -100550753 + MLT1C LTR MaLR 7 454 -13 788 238 0 6 chr5 102534825 102534989 -100550543 - MLT1A2 LTR MaLR 0 374 212 7695 28 0 0 chr5 102537486 102539056 -100546476 - L1PA3 LINE L1 0 6155 4586 5531 27 6 5 chr5 102539056 102539718 -100545814 + L1PA3 LINE L1 3930 4592 -1554 1916 129 36 0 chr5 102539901 102540179 -100545353 + AluSq SINE Alu 1 288 -25 990 185 0 15 chr5 102540198 102540393 -100545139 + MER63 DNA MER1_type 87 278 -783 2101 235 32 11 chr5 102540441 102540973 -100544559 + MER63 DNA MER1_type 518 1060 0 261 387 57 0 chr5 102541280 102541404 -100544128 - L2 LINE L2 -8 3305 3175 228 286 0 0 chr5 102541969 102542039 -100543493 + MER94 DNA DNA 1 70 -64 489 301 39 29 chr5 102543931 102544137 -100541395 - L2 LINE L2 -908 2406 2199 275 314 196 13 chr5 102545528 102545681 -100539851 + MIR SINE MIR 34 214 -48 2177 110 3 19 chr5 102546743 102547053 -100538479 + AluSx SINE Alu 3 307 -5 867 307 37 79 chr5 102547062 102547518 -100538014 + MER115 DNA AcHobo 11 447 -246 1163 301 55 28 chr5 102548390 102548898 -100536634 - MARNA DNA Mariner -21 565 44 514 274 95 22 chr5 102549199 102549473 -100536059 + L1ME LINE L1 5508 5801 -320 216 0 0 0 chr5 102549623 102549647 -100535885 + (TG)n Simple_repeat Simple_repeat 1 24 0 26 30 0 0 chr5 102550288 102550321 -100535211 + AT_rich Low_complexity Low_complexity 1 33 0 1129 255 92 59 chr5 102551105 102551603 -100533929 - MLT1H1 LTR MaLR 0 555 1 468 179 0 12 chr5 102551896 102551980 -100533552 - AluJ/FLAM SINE Alu -229 83 1 270 0 0 0 chr5 102552042 102552072 -100533460 + (TG)n Simple_repeat Simple_repeat 1 30 0 272 274 215 15 chr5 102552072 102552207 -100533325 + MIR3 SINE MIR 32 193 -15 248 311 76 25 chr5 102552249 102552368 -100533164 + MIR SINE MIR 4 128 -134 230 245 0 0 chr5 102553945 102553994 -100531538 + CT-rich Low_complexity Low_complexity 2 50 0 40 49 0 0 chr5 102554288 102554349 -100531183 + AT_rich Low_complexity Low_complexity 1 61 0 213 235 0 0 chr5 102555663 102555714 -100529818 + A-rich Low_complexity Low_complexity 1 51 0 306 0 0 0 chr5 102555786 102555820 -100529712 + (CA)n Simple_repeat Simple_repeat 2 35 0 222 91 0 0 chr5 102558153 102558186 -100527346 + (TG)n Simple_repeat Simple_repeat 1 33 0 311 254 53 53 chr5 102559113 102559164 -100526368 + MIR SINE MIR 57 107 -155 1961 157 0 7 chr5 102559164 102559463 -100526069 - AluSx SINE Alu -15 297 1 311 254 53 53 chr5 102559463 102559525 -100526007 + MIR SINE MIR 106 170 -92 423 297 90 7 chr5 102559583 102559738 -100525794 - LTR33 LTR ERVL -343 178 11 207 451 40 0 chr5 102559813 102559988 -100525544 - L2 LINE L2 -216 3056 2875 1766 143 72 39 chr5 102560550 102560913 -100524619 - THE1C LTR MaLR 0 375 1 24 32 0 0 chr5 102561350 102561381 -100524151 + AT_rich Low_complexity Low_complexity 1 31 0 245 324 0 14 chr5 102561640 102561714 -100523818 - MIR SINE MIR -137 125 53 28 0 0 0 chr5 102563016 102563044 -100522488 + AT_rich Low_complexity Low_complexity 1 28 0 201 39 0 0 chr5 102563274 102563300 -100522232 + (TA)n Simple_repeat Simple_repeat 2 27 0 25 65 0 0 chr5 102564981 102565027 -100520505 + AT_rich Low_complexity Low_complexity 1 46 0 1952 123 0 4 chr5 102567405 102567674 -100517858 + AluSg SINE Alu 28 295 -15 26 0 0 0 chr5 102567686 102567712 -100517820 + AT_rich Low_complexity Low_complexity 1 26 0 464 297 47 0 chr5 102569168 102569296 -100516236 - L2 LINE L2 0 3272 3139 206 254 0 99 chr5 102569405 102569476 -100516056 + L2 LINE L2 3242 3305 -8 870 331 70 17 chr5 102570856 102571330 -100514202 - L3 LINE CR1 -212 1365 867 199 250 0 0 chr5 102571435 102571479 -100514053 - MIR SINE MIR -3 259 216 25 31 0 0 chr5 102571510 102571542 -100513990 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 102573532 102573553 -100511979 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1187 319 98 50 chr5 102574603 102575525 -100510007 - L2 LINE L2 0 3313 2325 2489 215 81 14 chr5 102575525 102576092 -100509440 + MER77 LTR ERV1 1 605 0 1187 319 98 50 chr5 102576092 102576220 -100509312 - L2 LINE L2 -988 2325 2205 1633 226 84 31 chr5 102576605 102577083 -100508449 + MLT1D LTR MaLR 3 505 0 453 66 0 0 chr5 102578244 102578305 -100507227 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 190 38 38 chr5 102578992 102579071 -100506461 + MIR3 SINE MIR 121 199 -9 390 0 83 0 chr5 102579243 102579303 -100506229 + GA-rich Low_complexity Low_complexity 4 68 0 210 120 40 40 chr5 102579399 102579449 -100506083 + T-rich Low_complexity Low_complexity 3 52 0 1292 119 40 22 chr5 102580689 102580915 -100504617 + MER65A LTR ERV1 112 341 -104 22 35 0 0 chr5 102581247 102581276 -100504256 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 102581332 102581353 -100504179 + AT_rich Low_complexity Low_complexity 1 21 0 294 361 104 48 chr5 102581505 102581840 -100503692 - L2 LINE L2 -3 3269 2916 246 176 0 0 chr5 102582070 102582121 -100503411 + (CAT)n Simple_repeat Simple_repeat 3 53 0 332 247 97 0 chr5 102582137 102582230 -100503302 - MIR SINE MIR -58 204 103 3164 38 3 5 chr5 102583391 102583783 -100501749 + L1PA4 LINE L1 5762 6152 -3 300 339 78 0 chr5 102583975 102584090 -100501442 + L2 LINE L2 3149 3272 0 21 0 0 0 chr5 102584780 102584801 -100500731 + AT_rich Low_complexity Low_complexity 1 21 0 447 320 111 25 chr5 102586278 102586522 -100499010 - Charlie8 DNA MER1_type -2152 265 1 21 0 0 0 chr5 102586753 102586774 -100498758 + AT_rich Low_complexity Low_complexity 1 21 0 345 280 79 40 chr5 102586988 102587292 -100498240 - L1ME4a LINE L1 -152 5969 5654 1507 124 4 17 chr5 102587534 102587767 -100497765 - AluSq SINE Alu -83 230 1 385 259 95 34 chr5 102588250 102588397 -100497135 + MIR SINE MIR 107 262 0 36 40 0 0 chr5 102588440 102588490 -100497042 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 102589286 102589318 -100496214 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 102589576 102589602 -100495930 + AT_rich Low_complexity Low_complexity 1 26 0 408 329 26 13 chr5 102589818 102589973 -100495559 - MIR3 SINE MIR -5 203 47 183 42 0 0 chr5 102589988 102590012 -100495520 + (TA)n Simple_repeat Simple_repeat 2 25 0 575 332 85 0 chr5 102591867 102592090 -100493442 + MIR SINE MIR 21 262 0 1848 155 13 3 chr5 102592405 102592708 -100492824 + AluSx SINE Alu 1 306 -6 15201 181 34 10 chr5 102592929 102596453 -100489079 - L1MA4A LINE L1 -6 6999 3242 1755 171 123 28 chr5 102596453 102596844 -100488688 - MSTA LTR MaLR 0 428 1 15201 181 34 10 chr5 102596844 102599835 -100485697 - L1MA4A LINE L1 -3763 3242 325 435 141 14 0 chr5 102599890 102599961 -100485571 - L1MA4A LINE L1 -6774 75 4 290 259 148 19 chr5 102600052 102600160 -100485372 - MLT1A1 LTR MaLR -78 287 166 840 250 45 5 chr5 102600463 102600687 -100484845 - L2 LINE L2 -537 2777 2545 691 223 0 0 chr5 102600739 102600860 -100484672 + MER45A DNA AcHobo 58 178 0 1430 263 195 17 chr5 102600860 102601551 -100483981 - L2 LINE L2 -780 2534 1721 180 413 28 28 chr5 102601607 102601825 -100483707 - L2 LINE L2 -947 2367 2150 468 176 235 0 chr5 102603174 102603310 -100482222 - MER105 DNA DNA -1 203 36 272 336 37 19 chr5 102603372 102603479 -100482053 + MLT1K LTR MaLR 270 378 -210 240 319 146 32 chr5 102603846 102604031 -100481501 - MIR SINE MIR 0 262 57 1027 139 36 0 chr5 102604371 102604565 -100480967 - L1MA7 LINE L1 0 6291 6091 314 314 133 34 chr5 102604636 102605084 -100480448 + L2 LINE L2 2575 3066 -247 25 0 0 0 chr5 102606579 102606604 -100478928 + AT_rich Low_complexity Low_complexity 1 25 0 355 359 16 27 chr5 102607194 102607378 -100478154 - MIR SINE MIR -75 187 6 428 320 39 55 chr5 102607722 102607784 -100477748 - MIR SINE MIR -9 253 192 1888 153 42 31 chr5 102607784 102608144 -100477388 - THE1B LTR MaLR 0 364 1 428 320 39 55 chr5 102608144 102608337 -100477195 - MIR SINE MIR -70 192 2 288 127 0 0 chr5 102609511 102609566 -100475966 + (TG)n Simple_repeat Simple_repeat 1 55 0 319 228 121 67 chr5 102610527 102610676 -100474856 + MIR SINE MIR 106 262 0 1935 143 0 19 chr5 102611948 102612256 -100473276 + MER1B DNA MER1_type 38 339 0 670 318 134 13 chr5 102612256 102612656 -100472876 - L2 LINE L2 -272 3041 2591 504 276 102 58 chr5 102612797 102612887 -100472645 + MLT1H LTR MaLR 1 86 -463 2399 61 3 0 chr5 102612887 102613184 -100472348 + AluY SINE Alu 1 298 -13 504 276 102 58 chr5 102613184 102613616 -100471916 + MLT1H LTR MaLR 86 549 0 325 295 39 52 chr5 102614141 102614359 -100471173 + L1ME LINE L1 5255 5430 -732 207 239 261 11 chr5 102614755 102614847 -100470685 + MER5A DNA MER1_type 73 187 -2 221 320 13 27 chr5 102617001 102617076 -100468456 + MIR SINE MIR 45 118 -90 2802 106 36 5 chr5 102617980 102618395 -100467137 - MSTA LTR MaLR 0 428 1 2262 106 0 0 chr5 102618475 102618767 -100466765 - AluSx SINE Alu -20 292 1 241 382 56 0 chr5 102619131 102619220 -100466312 - L2 LINE L2 -31 3282 3189 2211 97 10 0 chr5 102619832 102620130 -100465402 - AluSp SINE Alu -12 301 1 675 236 74 30 chr5 102621711 102621914 -100463618 + MER58C DNA MER1_type 2 213 -2 23 33 0 0 chr5 102622467 102622497 -100463035 + AT_rich Low_complexity Low_complexity 1 30 0 30 83 0 0 chr5 102622624 102622696 -100462836 + AT_rich Low_complexity Low_complexity 1 72 0 21 36 0 0 chr5 102624807 102624835 -100460697 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 102627438 102627467 -100458065 + AT_rich Low_complexity Low_complexity 1 29 0 195 346 83 49 chr5 102628835 102629159 -100456373 + L2 LINE L2 2864 3198 -74 2570 267 51 45 chr5 102629364 102630901 -100454631 + L1MCa LINE L1 5 1500 -4849 1133 175 24 16 chr5 102630902 102631154 -100454378 + L1MCa LINE L1 1544 1797 -4767 1006 127 0 4 chr5 102631160 102631381 -100454151 + AluSx SINE Alu 1 300 -12 4399 254 56 42 chr5 102631382 102631855 -100453677 + L1MCa LINE L1 1884 2349 -4215 2434 64 0 13 chr5 102631855 102632167 -100453365 + AluY SINE Alu 2 309 -2 4399 254 56 42 chr5 102632167 102633762 -100451770 + L1MCa LINE L1 2349 4140 -2424 515 274 51 66 chr5 102633764 102633961 -100451571 + MLT1D LTR MaLR 3 196 -309 658 199 34 20 chr5 102634081 102634227 -100451305 + L1MC3 LINE L1 5890 6037 -1748 7914 188 36 13 chr5 102634228 102635854 -100449678 + L1MC3 LINE L1 6116 7778 -7 301 321 112 32 chr5 102639177 102639364 -100446168 + MIR3 SINE MIR 3 204 -4 740 287 79 29 chr5 102639795 102640509 -100445023 - L1MEd LINE L1 -646 1687 444 863 298 4 27 chr5 102640730 102640992 -100444540 - MER102a DNA MER1_type 0 330 75 397 263 223 17 chr5 102641045 102641220 -100444312 + MIR SINE MIR 23 233 -29 180 239 42 56 chr5 102643336 102643407 -100442125 - L2 LINE L2 -187 3085 3016 242 171 24 0 chr5 102645107 102645148 -100440384 - HAL1b LINE L1 -952 396 355 1935 124 3 33 chr5 102646515 102646822 -100438710 + AluSc SINE Alu 1 298 -11 215 130 0 43 chr5 102646822 102646868 -100438664 + (GGAGAA)n Simple_repeat Simple_repeat 2 45 0 1395 22 6 11 chr5 102646868 102647049 -100438483 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2373 70 0 10 chr5 102647154 102647468 -100438064 + AluY SINE Alu 1 311 0 290 276 81 41 chr5 102648455 102648578 -100436954 - L2 LINE L2 0 3313 3186 1163 235 75 25 chr5 102649986 102650305 -100435227 + MLT1C LTR MaLR 133 467 0 452 315 49 12 chr5 102650793 102650955 -100434577 - MIR3 SINE MIR -34 174 7 185 132 26 0 chr5 102651399 102651437 -100434095 + (CA)n Simple_repeat Simple_repeat 2 40 0 1741 211 9 3 chr5 102653257 102653599 -100431933 - MER2 DNA MER2_type 0 344 1 263 263 179 11 chr5 102653951 102654046 -100431486 - MIR SINE MIR -2 260 150 661 227 61 9 chr5 102654046 102654275 -100431257 - HsTC2a DNA Tc2 -6 736 496 1735 187 51 0 chr5 102654275 102654621 -100430911 + MLT1A1 LTR MaLR 1 365 0 1050 327 50 16 chr5 102654624 102655067 -100430465 - HsTC2a DNA Tc2 -256 488 31 342 363 20 0 chr5 102655099 102655245 -100430287 + MIR SINE MIR 1 149 -113 225 305 59 47 chr5 102655295 102655551 -100429981 + L1MC/D LINE L1 5632 5890 -1918 22 35 0 0 chr5 102655624 102655653 -100429879 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr5 102655791 102655821 -100429711 + AT_rich Low_complexity Low_complexity 1 30 0 1837 128 46 0 chr5 102656011 102656353 -100429179 - AluSq SINE Alu 0 355 1 492 219 0 10 chr5 102657286 102657382 -100428150 + MER63 DNA MER1_type 33 753 -83 248 178 0 0 chr5 102657382 102657427 -100428105 + MER63 DNA MER1_type 978 1022 -38 242 224 141 0 chr5 102657474 102657559 -100427973 - MIR SINE MIR -101 161 65 343 298 157 21 chr5 102658323 102658514 -100427018 - MIR SINE MIR 0 262 46 2073 108 0 0 chr5 102659944 102660261 -100425271 - AluSc SINE Alu 0 317 1 193 29 59 0 chr5 102661012 102661046 -100424486 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 892 101 0 0 chr5 102661049 102661168 -100424364 - AluSc SINE Alu -23 286 168 655 262 35 25 chr5 102662341 102662543 -100422989 + MIR SINE MIR 59 262 0 318 289 123 0 chr5 102662588 102662702 -100422830 + L2 LINE L2 3140 3267 -5 761 261 39 13 chr5 102664543 102664773 -100420759 - MIR SINE MIR -10 252 17 403 317 175 11 chr5 102665226 102665598 -100419934 - MARNA DNA Mariner -146 440 8 1951 141 22 73 chr5 102665703 102666114 -100419418 - MLT1B LTR MaLR 0 390 1 574 346 44 9 chr5 102666419 102666647 -100418885 - MIR SINE MIR -15 247 12 407 333 87 7 chr5 102666763 102666913 -100418619 - L2 LINE L2 -3 3269 3108 21 0 0 0 chr5 102667043 102667064 -100418468 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 102668394 102668420 -100417112 + AT_rich Low_complexity Low_complexity 1 26 0 1238 251 62 72 chr5 102669075 102669630 -100415902 - L2 LINE L2 -1 3312 2765 576 329 54 42 chr5 102669722 102670298 -100415234 - L2 LINE L2 0 3272 2690 263 332 2 0 chr5 102670584 102670679 -100414853 - MIR SINE MIR -59 149 68 217 284 54 14 chr5 102671014 102671088 -100414444 - L2 LINE L2 0 3313 3237 6988 129 4 6 chr5 102671880 102673296 -100412236 + L1MA2 LINE L1 4890 6304 0 21 0 0 0 chr5 102673914 102673935 -100411597 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 102673961 102673982 -100411550 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 102674268 102674305 -100411227 + AT_rich Low_complexity Low_complexity 1 37 0 2596 251 33 35 chr5 102674706 102675551 -100409981 - L1ME1 LINE L1 -51 6115 5287 25 0 0 0 chr5 102675642 102675667 -100409865 + AT_rich Low_complexity Low_complexity 1 25 0 340 204 0 19 chr5 102676656 102676759 -100408773 + GA-rich Low_complexity Low_complexity 4 104 0 2429 56 13 0 chr5 102676859 102677163 -100408369 + AluY SINE Alu 1 308 -3 417 227 204 28 chr5 102677416 102677592 -100407940 + MIR SINE MIR 56 262 0 193 271 21 0 chr5 102683376 102683424 -100402108 + L2 LINE L2 3255 3303 -10 205 232 36 0 chr5 102684687 102684743 -100400789 + GA-rich Low_complexity Low_complexity 2 59 0 7521 123 26 9 chr5 102684840 102686051 -100399481 + Tigger3b DNA MER2_type 1 1231 0 2524 43 0 0 chr5 102686733 102687032 -100398500 - AluY SINE Alu -6 305 7 221 250 0 0 chr5 102687123 102687167 -100398365 + polypurine Low_complexity Low_complexity 3 46 0 2465 160 12 2 chr5 102687169 102687588 -100397944 + L1PB4 LINE L1 5595 6017 -139 412 266 43 53 chr5 102688840 102689122 -100396410 - L1ME4a LINE L1 -152 5969 5691 2020 108 0 36 chr5 102690092 102690399 -100395133 + AluSx SINE Alu 4 299 -13 189 0 0 0 chr5 102692609 102692630 -100392902 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 23 54 0 0 chr5 102692851 102692888 -100392644 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 102694213 102694244 -100391288 + AT_rich Low_complexity Low_complexity 1 31 0 209 220 0 34 chr5 102694536 102694595 -100390937 - MIR SINE MIR -72 190 134 417 153 0 0 chr5 102694605 102694677 -100390855 + L1MB8 LINE L1 5172 5243 -903 3760 183 19 8 chr5 102694681 102695424 -100390108 + L1MB8 LINE L1 5419 6169 -9 229 241 102 56 chr5 102695475 102695583 -100389949 - MIR SINE MIR -148 114 2 224 321 113 0 chr5 102696059 102696165 -100389367 - MIR3 SINE MIR -5 203 86 584 313 112 13 chr5 102696226 102696459 -100389073 - MIR SINE MIR -3 259 4 27 0 0 0 chr5 102696489 102696516 -100389016 + AT_rich Low_complexity Low_complexity 1 27 0 43 76 0 0 chr5 102696595 102696687 -100388845 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr5 102697469 102697497 -100388035 + AT_rich Low_complexity Low_complexity 1 28 0 860 257 119 10 chr5 102698827 102699130 -100386402 + MER46C DNA MER2_type 1 336 -2 216 214 0 0 chr5 102699180 102699222 -100386310 + (TA)n Simple_repeat Simple_repeat 1 42 0 319 311 66 5 chr5 102699323 102699535 -100385997 + L1ME4a LINE L1 5726 5950 -171 245 192 202 61 chr5 102700871 102700970 -100384562 - MIR SINE MIR -1 261 149 379 264 145 43 chr5 102700973 102701208 -100384324 + L2 LINE L2 3045 3303 -10 229 242 145 89 chr5 102701193 102701317 -100384215 - MIR SINE MIR -100 162 32 * 2030 191 47 63 chr5 102702023 102702090 -100383442 + MLT2B1 LTR ERVL 1 68 -452 2157 114 79 15 chr5 102702090 102702432 -100383100 - THE1B LTR MaLR 0 364 1 2030 191 47 63 chr5 102702432 102702857 -100382675 + MLT2B1 LTR ERVL 68 485 -35 296 91 23 0 chr5 102702892 102702944 -100382588 + MLT2B1 LTR ERVL 399 518 -2 203 407 29 26 chr5 102703115 102703388 -100382144 - L2 LINE L2 -943 2371 2098 306 206 68 0 chr5 102704872 102704945 -100380587 + MIR SINE MIR 185 262 0 349 243 96 52 chr5 102705152 102705288 -100380244 + MIR SINE MIR 121 262 0 630 333 87 34 chr5 102705357 102705826 -100379706 + L2 LINE L2 2820 3313 0 222 324 106 14 chr5 102705938 102706080 -100379452 - MIR SINE MIR -65 197 43 25 65 0 0 chr5 102706616 102706662 -100378870 + AT_rich Low_complexity Low_complexity 1 46 0 271 264 43 46 chr5 102706743 102707003 -100378529 - HAL1b LINE L1 -96 2411 761 226 243 175 42 chr5 102707067 102707256 -100378276 - HAL1b LINE L1 -432 916 703 26 50 0 0 chr5 102707278 102707318 -100378214 + AT_rich Low_complexity Low_complexity 1 40 0 1252 237 68 64 chr5 102707563 102707741 -100377791 + LTR40b LTR ERVL 6 182 -280 2503 68 3 0 chr5 102707741 102708049 -100377483 + AluY SINE Alu 3 311 0 1252 237 68 64 chr5 102708049 102708325 -100377207 + LTR40b LTR ERVL 182 462 0 305 284 143 34 chr5 102708784 102709720 -100375812 + L1MC4a LINE L1 2681 3732 -2414 1614 205 39 16 chr5 102709720 102710101 -100375431 - MLT1B LTR MaLR 0 390 1 305 284 143 34 chr5 102710101 102710155 -100375377 + L1MC4a LINE L1 3732 3779 -2367 1159 290 80 23 chr5 102710222 102710863 -100374669 + L1MC4a LINE L1 5592 6268 -1540 2058 137 52 0 chr5 102710894 102711237 -100374295 - MER46B DNA MER2_type 0 236 1 3492 140 2 6 chr5 102711844 102712373 -100373159 + MER1A DNA MER1_type 1 527 0 1363 179 34 0 chr5 102712466 102712701 -100372831 + AluJo SINE Alu 1 243 -69 209 135 27 0 chr5 102712940 102712977 -100372555 + T-rich Low_complexity Low_complexity 4 41 0 258 289 150 39 chr5 102712988 102713168 -100372364 + L3 LINE CR1 920 1119 -458 * 262 330 58 0 chr5 102713159 102713262 -100372270 + L2 LINE L2 688 796 -2518 273 236 230 47 chr5 102713332 102713480 -100372052 + MER5B DNA MER1_type 4 178 0 357 227 0 34 chr5 102716076 102716164 -100369368 + MIR SINE MIR 96 180 -82 218 148 62 25 chr5 102716170 102716251 -100369281 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 1555 195 0 17 chr5 102716393 102716680 -100368852 - AluJb SINE Alu -30 282 1 320 250 27 135 chr5 102717957 102718105 -100367427 - L2 LINE L2 0 3313 3182 383 247 206 14 chr5 102718145 102718291 -100367241 - MIR SINE MIR -24 238 65 38 0 0 0 chr5 102719089 102719127 -100366405 + AT_rich Low_complexity Low_complexity 1 38 0 201 270 54 40 chr5 102720434 102720508 -100365024 - MIR3 SINE MIR -52 156 82 700 153 15 23 chr5 102721561 102721692 -100363840 + FLAM_A SINE Alu 4 133 0 41 0 0 0 chr5 102721787 102721828 -100363704 + AT_rich Low_complexity Low_complexity 1 41 0 472 171 9 19 chr5 102722778 102722883 -100362649 - L1MA4 LINE L1 -4 6296 6193 524 220 17 169 chr5 102722978 102723273 -100362259 + MIR SINE MIR 12 261 -1 415 294 23 73 chr5 102723384 102723561 -100361971 + MIR3 SINE MIR 20 187 -21 5199 162 18 38 chr5 102725526 102726778 -100358754 - L1MA7 LINE L1 -12 6279 5067 1950 166 0 10 chr5 102726778 102727092 -100358440 - AluSx SINE Alu -1 311 1 5199 162 18 38 chr5 102727092 102727404 -100358128 - L1MA7 LINE L1 -1224 5067 4750 2857 161 14 9 chr5 102727386 102727950 -100357582 + L1MA7 LINE L1 4201 4767 -1379 * 202 297 31 0 chr5 102728610 102728674 -100356858 + MER5A DNA MER1_type 89 154 -35 198 170 264 0 chr5 102728806 102728859 -100356673 - MIR SINE MIR -11 251 185 1679 211 91 17 chr5 102728986 102729347 -100356185 + MLT1E LTR MaLR 206 593 0 23 33 0 0 chr5 102731522 102731552 -100353980 + AT_rich Low_complexity Low_complexity 1 30 0 757 226 11 6 chr5 102732377 102732554 -100352978 + MER5B DNA MER1_type 1 178 0 562 308 32 16 chr5 102734030 102734280 -100351252 - L3 LINE CR1 -807 770 517 204 245 19 0 chr5 102735289 102735342 -100350190 + T-rich Low_complexity Low_complexity 6 59 0 187 380 98 18 chr5 102735530 102735693 -100349839 + L3 LINE CR1 639 814 -763 268 309 51 67 chr5 102736389 102736567 -100348965 - MIR3 SINE MIR -31 177 3 183 258 163 68 chr5 102738888 102739078 -100346454 + L2 LINE L2 608 815 -2499 13479 30 4 0 chr5 102739729 102742094 -100343438 - L1PA5 LINE L1 -6 6148 3776 3623 191 100 25 chr5 102743095 102743885 -100341647 - MER21B LTR ERV1 -10 853 5 527 277 18 42 chr5 102744172 102744338 -100341194 - MIR3 SINE MIR -45 163 2 725 225 19 62 chr5 102744660 102744869 -100340663 + L2 LINE L2 3114 3313 0 297 51 0 0 chr5 102745011 102745050 -100340482 + (TG)n Simple_repeat Simple_repeat 1 39 0 1509 146 18 15 chr5 102745050 102745324 -100340208 - THE1C LTR MaLR -6 369 95 369 43 0 0 chr5 102745331 102745378 -100340154 + (TG)n Simple_repeat Simple_repeat 1 47 0 231 231 8 16 chr5 102745378 102745499 -100340033 + GA-rich Low_complexity Low_complexity 2 121 0 1965 191 128 5 chr5 102746838 102747268 -100338264 + MLT1D LTR MaLR 1 483 -22 2250 103 3 3 chr5 102748128 102748439 -100337093 - AluY SINE Alu 0 311 1 596 251 40 40 chr5 102749227 102749402 -100336130 + MIR SINE MIR 75 249 -13 21 0 0 0 chr5 102749421 102749442 -100336090 + AT_rich Low_complexity Low_complexity 1 21 0 636 250 45 112 chr5 102749470 102749846 -100335686 - MLT1J LTR MaLR -61 450 100 462 361 62 29 chr5 102750447 102751015 -100334517 + L2 LINE L2 2453 3045 -227 1101 75 0 0 chr5 102751260 102751406 -100334126 - L1PA8 LINE L1 -3 6169 6024 180 0 0 0 chr5 102754403 102754423 -100331109 + (CATCC)n Simple_repeat Simple_repeat 3 22 0 22 0 0 0 chr5 102756747 102756769 -100328763 + AT_rich Low_complexity Low_complexity 1 22 0 1684 168 52 17 chr5 102758107 102758452 -100327080 + L1MB5 LINE L1 5653 6009 -165 398 306 8 25 chr5 102758521 102758642 -100326890 + L2 LINE L2 3148 3266 -6 206 296 102 61 chr5 102759127 102759225 -100326307 + L2 LINE L2 3165 3266 -47 763 179 0 8 chr5 102759307 102759441 -100326091 + FLAM_C SINE Alu 1 133 0 207 0 0 0 chr5 102759459 102759482 -100326050 + (CAA)n Simple_repeat Simple_repeat 2 24 0 294 335 113 30 chr5 102759485 102759918 -100325614 + L2 LINE L2 2291 2759 -555 239 236 28 42 chr5 102760320 102760392 -100325140 + L2 LINE L2 3202 3272 0 198 208 0 0 chr5 102760393 102760441 -100325091 + (TA)n Simple_repeat Simple_repeat 1 48 0 209 233 0 0 chr5 102765336 102765379 -100320153 + (TA)n Simple_repeat Simple_repeat 2 44 0 303 282 146 0 chr5 102766389 102766492 -100319040 - MER94 DNA DNA -16 118 1 589 271 90 0 chr5 102766894 102767082 -100318450 - MER63A DNA MER1_type -4 206 2 234 0 0 0 chr5 102867381 102867407 -100218125 + (TG)n Simple_repeat Simple_repeat 1 26 0 276 281 215 15 chr5 102867407 102867542 -100217990 + MIR3 SINE MIR 32 193 -15 246 311 76 25 chr5 102867584 102867703 -100217829 + MIR SINE MIR 4 128 -134 230 245 0 0 chr5 102869278 102869327 -100216205 + CT-rich Low_complexity Low_complexity 2 50 0 40 49 0 0 chr5 102869621 102869682 -100215850 + AT_rich Low_complexity Low_complexity 1 61 0 213 235 0 0 chr5 102871085 102871136 -100214396 + A-rich Low_complexity Low_complexity 1 51 0 324 0 0 0 chr5 102871208 102871244 -100214288 + (CA)n Simple_repeat Simple_repeat 2 37 0 222 91 0 0 chr5 102873588 102873621 -100211911 + (TG)n Simple_repeat Simple_repeat 1 33 0 319 254 53 53 chr5 102874548 102874599 -100210933 + MIR SINE MIR 57 107 -155 1932 157 0 7 chr5 102874599 102874898 -100210634 - AluSx SINE Alu -15 297 1 319 254 53 53 chr5 102874898 102874960 -100210572 + MIR SINE MIR 106 170 -92 395 314 46 7 chr5 102875020 102875173 -100210359 - LTR33 LTR ERVL -352 169 11 192 440 38 6 chr5 102875266 102875423 -100210109 - L2 LINE L2 -276 3037 2876 199 183 267 0 chr5 102875469 102875529 -100210003 - L2 LINE L2 -574 2740 2665 189 387 0 0 chr5 102875648 102875710 -100209822 - MIR SINE MIR -156 106 45 27 0 0 0 chr5 102877004 102877031 -100208501 + AT_rich Low_complexity Low_complexity 1 27 0 34 72 0 0 chr5 102877224 102877293 -100208239 + AT_rich Low_complexity Low_complexity 1 69 0 25 65 0 0 chr5 102878667 102878713 -100206819 + AT_rich Low_complexity Low_complexity 1 46 0 1279 117 10 15 chr5 102881160 102881366 -100204166 + AluSg SINE Alu 28 232 -78 191 147 0 29 chr5 102881777 102881811 -100203721 - L2 LINE L2 -100 3213 3181 857 332 70 17 chr5 102882412 102882894 -100202638 - L3 LINE CR1 -212 1365 858 197 250 0 0 chr5 102882991 102883035 -100202497 - MIR SINE MIR -3 259 216 25 31 0 0 chr5 102883066 102883098 -100202434 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 102884777 102884798 -100200734 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1228 318 103 48 chr5 102885848 102886770 -100198762 - L2 LINE L2 0 3313 2315 2471 215 81 14 chr5 102886770 102887337 -100198195 + MER77 LTR ERV1 1 605 0 1228 318 103 48 chr5 102887337 102887490 -100198042 - L2 LINE L2 -998 2315 2172 1227 355 35 64 chr5 102887850 102888368 -100197164 + MLT1D LTR MaLR 3 505 0 453 66 0 0 chr5 102889529 102889590 -100195942 + (TG)n Simple_repeat Simple_repeat 2 62 0 1292 119 40 22 chr5 102890447 102890673 -100194859 + MER65A LTR ERV1 112 341 -104 22 35 0 0 chr5 102891005 102891034 -100194498 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 102891090 102891111 -100194421 + AT_rich Low_complexity Low_complexity 1 21 0 300 361 104 48 chr5 102891263 102891598 -100193934 - L2 LINE L2 -3 3269 2916 246 176 0 0 chr5 102891829 102891880 -100193652 + (CAT)n Simple_repeat Simple_repeat 3 53 0 335 247 97 0 chr5 102891896 102891989 -100193543 - MIR SINE MIR -58 204 103 3173 36 3 5 chr5 102893022 102893414 -100192118 + L1PA4 LINE L1 5762 6152 -3 297 339 78 0 chr5 102893606 102893721 -100191811 + L2 LINE L2 3149 3272 0 21 0 0 0 chr5 102894411 102894432 -100191100 + AT_rich Low_complexity Low_complexity 1 21 0 449 323 101 33 chr5 102895876 102896152 -100189380 - MER102b DNA MER1_type -46 295 1 21 0 0 0 chr5 102896383 102896404 -100189128 + AT_rich Low_complexity Low_complexity 1 21 0 382 283 79 40 chr5 102896618 102896922 -100188610 - L1ME4a LINE L1 -152 5969 5654 1476 124 4 17 chr5 102897164 102897397 -100188135 - AluSq SINE Alu -83 230 1 392 259 95 34 chr5 102897880 102898027 -100187505 + MIR SINE MIR 107 262 0 36 40 0 0 chr5 102898070 102898120 -100187412 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr5 102898916 102898948 -100186584 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 102899206 102899232 -100186300 + AT_rich Low_complexity Low_complexity 1 26 0 410 329 26 13 chr5 102899448 102899603 -100185929 - MIR3 SINE MIR -5 203 47 183 42 0 0 chr5 102899618 102899642 -100185890 + (TA)n Simple_repeat Simple_repeat 2 25 0 580 332 85 0 chr5 102901497 102901720 -100183812 + MIR SINE MIR 21 262 0 1814 155 13 3 chr5 102902035 102902338 -100183194 + AluSx SINE Alu 1 306 -6 5673 156 35 15 chr5 102902559 102904377 -100181155 - L1MA4A LINE L1 -6 6999 5146 9083 185 30 10 chr5 102904481 102905909 -100179623 - L1MA4A LINE L1 -1981 4867 3470 1737 171 123 28 chr5 102905909 102906300 -100179232 - MSTA LTR MaLR 0 428 1 9083 185 30 10 chr5 102906300 102909297 -100176235 - L1MA4A LINE L1 -3378 3470 325 432 141 14 0 chr5 102909352 102909423 -100176109 - L1MA4A LINE L1 -6774 75 4 292 259 148 19 chr5 102909514 102909622 -100175910 - MLT1A1 LTR MaLR -78 287 166 837 250 45 5 chr5 102909925 102910149 -100175383 - L2 LINE L2 -537 2777 2545 696 223 0 0 chr5 102910201 102910322 -100175210 + MER45A DNA AcHobo 58 178 0 1427 263 195 17 chr5 102910322 102911013 -100174519 - L2 LINE L2 -780 2534 1721 193 413 28 28 chr5 102911069 102911287 -100174245 - L2 LINE L2 -947 2367 2150 455 178 244 0 chr5 102912635 102912770 -100172762 - MER105 DNA DNA -1 203 36 272 336 37 19 chr5 102912831 102912938 -100172594 + MLT1K LTR MaLR 270 378 -210 240 319 146 32 chr5 102913304 102913489 -100172043 - MIR SINE MIR 0 262 57 1027 139 36 0 chr5 102913830 102914024 -100171508 - L1MA7 LINE L1 0 6291 6091 25 0 0 0 chr5 102915742 102915767 -100169765 + AT_rich Low_complexity Low_complexity 1 25 0 355 359 16 27 chr5 102916358 102916542 -100168990 - MIR SINE MIR -75 187 6 397 314 39 62 chr5 102916885 102916947 -100168585 - MIR SINE MIR -9 253 191 1888 153 42 31 chr5 102916947 102917307 -100168225 - THE1B LTR MaLR 0 364 1 397 314 39 62 chr5 102917307 102917502 -100168030 - MIR SINE MIR -71 191 2 288 127 0 0 chr5 102918676 102918731 -100166801 + (TG)n Simple_repeat Simple_repeat 1 55 0 319 228 121 67 chr5 102919692 102919841 -100165691 + MIR SINE MIR 106 262 0 1935 143 0 19 chr5 102921111 102921419 -100164113 + MER1B DNA MER1_type 38 339 0 670 318 134 13 chr5 102921419 102921819 -100163713 - L2 LINE L2 -272 3041 2591 521 275 102 58 chr5 102921960 102922050 -100163482 + MLT1H LTR MaLR 1 86 -463 2399 61 3 0 chr5 102922050 102922347 -100163185 + AluY SINE Alu 1 298 -13 521 275 102 58 chr5 102922347 102922779 -100162753 + MLT1H LTR MaLR 86 549 0 325 295 39 52 chr5 102923304 102923522 -100162010 + L1ME LINE L1 5255 5430 -732 207 239 261 11 chr5 102923918 102924010 -100161522 + MER5A DNA MER1_type 73 187 -2 221 320 13 27 chr5 102926161 102926236 -100159296 + MIR SINE MIR 45 118 -90 2802 106 36 5 chr5 102927140 102927555 -100157977 - MSTA LTR MaLR 0 428 1 2249 110 0 0 chr5 102927635 102927927 -100157605 - AluSx SINE Alu -20 292 1 241 382 56 0 chr5 102928291 102928380 -100157152 - L2 LINE L2 -31 3282 3189 2211 97 10 0 chr5 102928992 102929290 -100156242 - AluSp SINE Alu -12 301 1 675 236 74 30 chr5 102930870 102931073 -100154459 + MER58C DNA MER1_type 2 213 -2 21 36 0 0 chr5 102932930 102932958 -100152574 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 102935404 102935433 -100150099 + AT_rich Low_complexity Low_complexity 1 29 0 195 346 83 49 chr5 102936800 102937124 -100148408 + L2 LINE L2 2864 3198 -74 2570 267 51 45 chr5 102937329 102938866 -100146666 + L1MCa LINE L1 5 1500 -4849 1133 175 24 16 chr5 102938867 102939119 -100146413 + L1MCa LINE L1 1544 1797 -4767 994 131 0 4 chr5 102939125 102939346 -100146186 + AluSx SINE Alu 1 300 -12 4387 254 56 42 chr5 102939347 102939820 -100145712 + L1MCa LINE L1 1884 2349 -4215 2434 64 0 13 chr5 102939820 102940132 -100145400 + AluY SINE Alu 2 309 -2 4387 254 56 42 chr5 102940132 102941726 -100143806 + L1MCa LINE L1 2349 4140 -2424 515 274 51 66 chr5 102941728 102941925 -100143607 + MLT1D LTR MaLR 3 196 -309 628 197 34 27 chr5 102942046 102942193 -100143339 + L1MC3 LINE L1 5890 6037 -1748 7944 186 36 13 chr5 102942194 102943820 -100141712 + L1MC3 LINE L1 6116 7778 -7 301 321 112 32 chr5 102947263 102947450 -100138082 + MIR3 SINE MIR 3 204 -4 740 290 81 28 chr5 102947881 102948595 -100136937 - L1MEd LINE L1 -646 1687 444 863 298 4 27 chr5 102948816 102949078 -100136454 - MER102a DNA MER1_type 0 330 75 397 263 223 17 chr5 102949131 102949306 -100136226 + MIR SINE MIR 23 233 -29 180 239 42 56 chr5 102951422 102951493 -100134039 - L2 LINE L2 -187 3085 3016 318 50 0 0 chr5 102952679 102952719 -100132813 + (GAA)n Simple_repeat Simple_repeat 3 42 0 2351 76 0 10 chr5 102952824 102953138 -100132394 + AluY SINE Alu 1 311 0 290 276 81 41 chr5 102954125 102954248 -100131284 - L2 LINE L2 0 3313 3186 1163 235 75 25 chr5 102955682 102956001 -100129531 + MLT1C LTR MaLR 133 467 0 452 315 49 12 chr5 102956489 102956651 -100128881 - MIR3 SINE MIR -34 174 7 255 206 14 27 chr5 102957070 102957143 -100128389 + (CATA)n Simple_repeat Simple_repeat 4 75 0 1741 211 9 3 chr5 102958367 102958709 -100126823 - MER2 DNA MER2_type 0 344 1 263 263 179 11 chr5 102959061 102959156 -100126376 - MIR SINE MIR -2 260 150 661 227 61 9 chr5 102959156 102959385 -100126147 - HsTC2 DNA Tc2 -6 1892 1652 1735 187 45 0 chr5 102959399 102959731 -100125801 + MLT1A1 LTR MaLR 19 365 0 563 321 61 32 chr5 102959734 102960045 -100125487 - HsTC2 DNA Tc2 -254 1644 1149 492 219 0 10 chr5 102960879 102960975 -100124557 + MER63 DNA MER1_type 33 753 -309 248 178 0 0 chr5 102960975 102961020 -100124512 + MER63 DNA MER1_type 980 1024 -38 242 224 141 0 chr5 102961067 102961152 -100124380 - MIR SINE MIR -101 161 65 343 298 157 21 chr5 102961917 102962108 -100123424 - MIR SINE MIR 0 262 46 193 29 59 0 chr5 102963533 102963567 -100121965 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 892 101 0 0 chr5 102963570 102963689 -100121843 - AluSc SINE Alu -23 286 168 655 262 35 25 chr5 102964764 102964966 -100120566 + MIR SINE MIR 59 262 0 318 289 123 0 chr5 102965011 102965125 -100120407 + L2 LINE L2 3140 3267 -5 761 261 39 13 chr5 102966990 102967220 -100118312 - MIR SINE MIR -10 252 17 379 300 173 11 chr5 102967673 102967950 -100117582 - MARNA DNA Mariner -146 440 119 1522 150 24 88 chr5 102968159 102968500 -100117032 - MLT1B LTR MaLR -71 319 1 574 346 44 9 chr5 102968805 102969033 -100116499 - MIR SINE MIR -15 247 12 407 333 87 7 chr5 102969149 102969299 -100116233 - L2 LINE L2 -3 3269 3108 21 0 0 0 chr5 102969429 102969450 -100116082 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 102970780 102970806 -100114726 + AT_rich Low_complexity Low_complexity 1 26 0 1238 251 62 72 chr5 102971461 102972016 -100113516 - L2 LINE L2 -1 3312 2765 576 329 54 42 chr5 102972108 102972684 -100112848 - L2 LINE L2 0 3272 2690 263 332 2 0 chr5 102972970 102973065 -100112467 - MIR SINE MIR -59 149 68 217 284 54 14 chr5 102973400 102973474 -100112058 - L2 LINE L2 0 3313 3237 6984 129 4 5 chr5 102974343 102975758 -100109774 + L1MA2 LINE L1 4890 6304 0 340 204 0 19 chr5 102976989 102977092 -100108440 + GA-rich Low_complexity Low_complexity 4 104 0 2429 56 13 0 chr5 102977192 102977496 -100108036 + AluY SINE Alu 1 308 -3 417 227 204 28 chr5 102977749 102977925 -100107607 + MIR SINE MIR 56 262 0 193 271 21 0 chr5 102983710 102983758 -100101774 + L2 LINE L2 3255 3303 -10 21 0 0 0 chr5 102984922 102984943 -100100589 + AT_rich Low_complexity Low_complexity 1 21 0 7537 122 26 9 chr5 102985175 102986386 -100099146 + Tigger3b DNA MER2_type 1 1231 0 2528 47 0 0 chr5 102987069 102987370 -100098162 - AluY SINE Alu -4 307 7 221 250 0 0 chr5 102987461 102987505 -100098027 + polypurine Low_complexity Low_complexity 3 46 0 968 169 6 6 chr5 102987507 102987684 -100097848 + L1P5 LINE L1 5595 5771 -385 466 266 43 53 chr5 102989053 102989335 -100096197 - L1MC4a LINE L1 -152 5969 5689 2032 104 0 36 chr5 102990308 102990615 -100094917 + AluSx SINE Alu 4 299 -13 189 0 0 0 chr5 102992870 102992891 -100092641 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 21 57 0 0 chr5 102993112 102993147 -100092385 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 102994471 102994502 -100091030 + AT_rich Low_complexity Low_complexity 1 31 0 375 256 66 16 chr5 102994685 102994806 -100090726 - MIR SINE MIR -2 260 134 417 153 0 0 chr5 102994816 102994888 -100090644 + L1MB8 LINE L1 5172 5243 -903 3762 178 21 11 chr5 102994892 102995635 -100089897 + L1MB8 LINE L1 5419 6169 -9 232 278 83 37 chr5 102995686 102995794 -100089738 - MIR SINE MIR -148 114 2 239 311 113 0 chr5 102996270 102996376 -100089156 - MIR3 SINE MIR -5 203 86 584 313 112 13 chr5 102996437 102996670 -100088862 - MIR SINE MIR -3 259 4 27 0 0 0 chr5 102996700 102996727 -100088805 + AT_rich Low_complexity Low_complexity 1 27 0 43 76 0 0 chr5 102996806 102996898 -100088634 + AT_rich Low_complexity Low_complexity 1 92 0 860 257 119 10 chr5 102997654 102997957 -100087575 + MER46C DNA MER2_type 1 336 -2 216 214 0 0 chr5 102998007 102998049 -100087483 + (TA)n Simple_repeat Simple_repeat 1 42 0 329 307 66 5 chr5 102998150 102998362 -100087170 + L1ME4a LINE L1 5726 5950 -171 243 182 202 61 chr5 102999583 102999682 -100085850 - MIR SINE MIR -1 261 149 379 264 145 43 chr5 102999685 102999920 -100085612 + L2 LINE L2 3045 3303 -10 229 242 145 89 chr5 102999905 103000029 -100085503 - MIR SINE MIR -100 162 32 * 1926 191 46 68 chr5 103000735 103000802 -100084730 + MLT2B1 LTR ERVL 1 68 -452 2130 117 79 15 chr5 103000802 103001144 -100084388 - THE1B LTR MaLR 0 364 1 1926 191 46 68 chr5 103001144 103001572 -100083960 + MLT2B1 LTR ERVL 68 485 -35 282 88 18 0 chr5 103001608 103001658 -100083874 + MLT2B3 LTR ERVL 390 552 -2 203 407 29 26 chr5 103001829 103002102 -100083430 - L2 LINE L2 -943 2371 2098 232 333 51 25 chr5 103103590 103103827 -99981705 + L2 LINE L2 1933 2175 -1139 1756 178 7 19 chr5 103104424 103104733 -99980799 - AluJo SINE Alu -6 306 2 2172 104 3 3 chr5 103104747 103105034 -99980498 - AluSg SINE Alu -23 287 1 237 333 116 48 chr5 103105046 103105193 -99980339 + L2 LINE L2 3116 3272 0 237 65 0 0 chr5 103105558 103105589 -99979943 + (CA)n Simple_repeat Simple_repeat 2 32 0 182 241 69 17 chr5 103106555 103106613 -99978919 - MIR SINE MIR -3 259 199 1181 209 110 52 chr5 103106614 103106959 -99978573 - MLT1A1 LTR MaLR 0 365 1 281 247 0 34 chr5 103106992 103107081 -99978451 + L2 LINE L2 3189 3274 -39 303 256 64 8 chr5 103107208 103107333 -99978199 + MIR SINE MIR 56 187 -75 915 266 53 36 chr5 103107340 103107793 -99977739 - MLT1G1 LTR MaLR -19 576 70 2374 106 48 31 chr5 103107793 103108151 -99977381 + THE1B LTR MaLR 1 364 0 915 266 53 36 chr5 103108151 103108223 -99977309 - MLT1G1 LTR MaLR -525 70 1 700 192 31 0 chr5 103110310 103110440 -99975092 + MER94 DNA DNA 1 134 0 23 0 0 0 chr5 103112749 103112772 -99972760 + AT_rich Low_complexity Low_complexity 1 23 0 730 23 0 0 chr5 103115643 103115731 -99969801 - L1PA7 LINE L1 0 6154 6067 306 50 0 0 chr5 103116649 103116689 -99968843 + (CA)n Simple_repeat Simple_repeat 2 41 0 2882 9 0 0 chr5 103117610 103117925 -99967607 - AluYb8 SINE Alu -3 315 1 22 35 0 0 chr5 103117947 103117976 -99967556 + AT_rich Low_complexity Low_complexity 1 29 0 902 134 23 41 chr5 103118447 103118619 -99966913 + FRAM SINE Alu 1 169 -7 270 310 20 20 chr5 103121153 103121253 -99964279 - L2 LINE L2 0 3313 3214 2532 69 0 0 chr5 103121302 103121608 -99963924 - AluY SINE Alu -5 306 1 413 302 22 22 chr5 103121772 103121874 -99963658 - L3 LINE CR1 -348 1229 1125 2301 73 0 3 chr5 103121874 103122186 -99963346 - AluY SINE Alu 0 311 1 413 302 22 22 chr5 103122186 103122262 -99963270 - L3 LINE CR1 -451 1126 1051 291 202 221 87 chr5 103122743 103122867 -99962665 + MIR SINE MIR 23 129 -133 231 36 0 0 chr5 103122867 103122895 -99962637 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 4155 48 2 6 chr5 103122895 103123411 -99962121 - L1PA5 LINE L1 -16 6138 5625 291 202 221 87 chr5 103123411 103123493 -99962039 + MIR SINE MIR 128 258 -4 292 226 66 38 chr5 103124187 103124293 -99961239 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr5 103125601 103125625 -99959907 + AT_rich Low_complexity Low_complexity 1 24 0 180 163 0 0 chr5 103125642 103125685 -99959847 + (TA)n Simple_repeat Simple_repeat 2 44 0 404 316 19 32 chr5 103126353 103126511 -99959021 + MIR SINE MIR 1 156 -106 481 255 150 0 chr5 103126511 103126664 -99958868 + MIR SINE MIR 53 228 -34 26 0 0 0 chr5 103127021 103127047 -99958485 + AT_rich Low_complexity Low_complexity 1 26 0 772 238 88 65 chr5 103127582 103127673 -99957859 + MLT1J LTR MaLR 135 222 -289 2569 30 0 10 chr5 103127673 103127977 -99957555 + AluY SINE Alu 1 301 -10 772 238 88 65 chr5 103127977 103128192 -99957340 + MLT1J LTR MaLR 222 448 -63 2372 70 0 0 chr5 103128950 103129248 -99956284 + AluY SINE Alu 1 298 -13 262 270 135 9 chr5 103129418 103129529 -99956003 - L2 LINE L2 -1 3312 3188 468 285 130 0 chr5 103130355 103130478 -99955054 + MIR SINE MIR 7 145 -117 2051 99 0 0 chr5 103130874 103131136 -99954396 - AluSg SINE Alu -9 301 40 30 69 0 0 chr5 103131458 103131516 -99954016 + AT_rich Low_complexity Low_complexity 1 58 0 261 0 0 0 chr5 103131619 103131648 -99953884 + (CA)n Simple_repeat Simple_repeat 2 30 0 1849 182 20 96 chr5 103131816 103132360 -99953172 + MLT1D LTR MaLR 3 505 0 26 0 0 0 chr5 103132974 103133000 -99952532 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr5 103134990 103135013 -99950519 + (T)n Simple_repeat Simple_repeat 1 23 0 467 224 72 16 chr5 103136110 103136235 -99949297 - MLT1G LTR MaLR -1 554 423 674 286 33 47 chr5 103136235 103136511 -99949021 - MLT1G LTR MaLR -303 287 16 2276 88 0 42 chr5 103136582 103136890 -99948642 + AluSg SINE Alu 1 295 -15 198 103 0 0 chr5 103137106 103137135 -99948397 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1474 207 85 32 chr5 103137706 103138116 -99947416 + L1MCc LINE L1 30 461 -5962 205 138 0 0 chr5 103138278 103138307 -99947225 + (GAA)n Simple_repeat Simple_repeat 2 30 0 2075 256 109 67 chr5 103138478 103140298 -99945234 + L1MCc LINE L1 655 2772 -4350 1677 156 120 33 chr5 103140678 103141037 -99944495 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 103141268 103141290 -99944242 + AT_rich Low_complexity Low_complexity 1 22 0 225 94 0 0 chr5 103141318 103141350 -99944182 + (T)n Simple_repeat Simple_repeat 1 32 0 1776 122 0 0 chr5 103141371 103141608 -99943924 - AluSx SINE Alu -75 237 1 189 315 0 0 chr5 103142280 103142334 -99943198 + MIR SINE MIR 154 207 -55 25 83 0 0 chr5 103142727 103142787 -99942745 + AT_rich Low_complexity Low_complexity 1 60 0 909 229 11 0 chr5 103143392 103143571 -99941961 + MER5A DNA MER1_type 4 184 -5 230 224 92 26 chr5 103143945 103144021 -99941511 + MIR SINE MIR 127 207 -55 1972 158 3 7 chr5 103145058 103145368 -99940164 - AluJb SINE Alu -3 309 1 1069 100 0 0 chr5 103145372 103145512 -99940020 - AluSg/x SINE Alu -3 306 167 1850 136 85 23 chr5 103145573 103145925 -99939607 - THE1C LTR MaLR -1 374 1 656 257 48 24 chr5 103146784 103146990 -99938542 + MIR SINE MIR 15 225 -37 26 50 0 0 chr5 103146997 103147037 -99938495 + AT_rich Low_complexity Low_complexity 1 40 0 349 315 24 17 chr5 103147623 103147783 -99937749 - MIR SINE MIR -46 162 2 268 365 160 10 chr5 103148087 103148375 -99937157 - L2 LINE L2 -562 2752 2422 23 54 0 0 chr5 103149005 103149042 -99936490 + AT_rich Low_complexity Low_complexity 1 37 0 214 312 110 0 chr5 103149124 103149233 -99936299 - L3 LINE CR1 -1 1576 1456 2495 74 0 0 chr5 103150603 103150914 -99934618 - AluY SINE Alu 0 311 1 189 0 0 0 chr5 103152934 103152955 -99932577 + (TAA)n Simple_repeat Simple_repeat 2 22 0 513 289 65 20 chr5 103153714 103153960 -99931572 + L1ME4a LINE L1 5678 5934 -187 37 0 0 0 chr5 103153963 103154000 -99931532 + AT_rich Low_complexity Low_complexity 1 37 0 287 220 53 33 chr5 103154072 103154222 -99931310 + L1ME4a LINE L1 5966 6118 -3 314 268 97 25 chr5 103154831 103154958 -99930574 + MIR SINE MIR 32 159 -49 204 317 173 10 chr5 103155934 103156038 -99929494 + MIR SINE MIR 7 127 -135 274 314 20 20 chr5 103156468 103156570 -99928962 - L3 LINE CR1 -111 1466 1365 3300 40 0 0 chr5 103157246 103157666 -99927866 - L1P LINE L1 -2306 3840 3421 6667 48 1 0 chr5 103157671 103158487 -99927045 + L1PA5 LINE L1 5337 6153 -1 2272 100 3 3 chr5 103158843 103159144 -99926388 - AluSx SINE Alu -11 301 1 326 215 122 28 chr5 103159343 103159450 -99926082 + MIR SINE MIR 72 188 -74 206 263 81 30 chr5 103159486 103159585 -99925947 - L2 LINE L2 -1084 2230 2127 374 254 56 78 chr5 103159832 103159974 -99925558 + MLT1J LTR MaLR 15 192 -293 1902 197 31 54 chr5 103160631 103160706 -99924826 + MLT1D LTR MaLR 1 76 -429 1674 198 22 32 chr5 103160706 103161075 -99924457 + MLT1A1 LTR MaLR 1 365 0 1902 197 31 54 chr5 103161075 103161516 -99924016 + MLT1D LTR MaLR 76 505 0 802 231 122 71 chr5 103162943 103163311 -99922221 - L1MCb LINE L1 -5708 337 1 2338 169 7 11 chr5 103163318 103163491 -99922041 - L1MA6 LINE L1 0 6300 6128 2001 144 42 3 chr5 103163491 103163825 -99921707 + MER7A DNA MER2_type 2 346 0 2338 169 7 11 chr5 103163825 103164089 -99921443 - L1MA6 LINE L1 -172 6128 5865 620 311 62 29 chr5 103164124 103164545 -99920987 - L1M4 LINE L1 -2373 3773 3339 22 56 0 0 chr5 103165286 103165322 -99920210 + AT_rich Low_complexity Low_complexity 1 36 0 210 261 43 58 chr5 103170113 103170182 -99915350 - L2 LINE L2 0 3272 3205 24 0 0 0 chr5 103170371 103170395 -99915137 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5 103171663 103171695 -99913837 + AT_rich Low_complexity Low_complexity 1 32 0 804 156 16 0 chr5 103174214 103174342 -99911190 + FLAM_A SINE Alu 1 130 -3 199 54 54 0 chr5 103175374 103175411 -99910121 + A-rich Low_complexity Low_complexity 2 40 0 24 0 0 0 chr5 103176985 103177009 -99908523 + AT_rich Low_complexity Low_complexity 1 24 0 670 334 91 49 chr5 103177437 103178350 -99907182 + L2 LINE L2 2007 2957 -357 359 295 49 16 chr5 103178767 103178889 -99906643 + L2 LINE L2 3184 3309 -4 247 250 23 23 chr5 103180117 103180205 -99905327 - L1MC4 LINE L1 0 8042 7955 788 218 37 37 chr5 103180237 103180453 -99905079 - LTR33 LTR ERVL -5 516 301 1733 177 26 3 chr5 103180513 103180808 -99904724 + L1MB2 LINE L1 5824 6129 -42 1995 151 30 48 chr5 103180808 103181205 -99904327 + MLT1B LTR MaLR 1 390 0 1733 177 26 3 chr5 103181205 103181248 -99904284 + L1MB2 LINE L1 6129 6170 -1 213 241 121 0 chr5 103181649 103181707 -99903825 - MIR SINE MIR -108 154 90 1475 171 4 11 chr5 103182041 103182315 -99903217 - L1PA16 LINE L1 0 6166 5895 30 45 0 0 chr5 103182389 103182433 -99903099 + AT_rich Low_complexity Low_complexity 1 44 0 1171 236 53 92 chr5 103182461 103182821 -99902711 - MLT2B1 LTR ERVL -68 346 1 1026 210 71 24 chr5 103182866 103183329 -99902203 - L1MC1 LINE L1 -179 5985 5545 1319 199 0 0 chr5 103183329 103183565 -99901967 + MER46A DNA MER2_type 1 236 0 1026 210 71 24 chr5 103183565 103184017 -99901515 - L1MC1 LINE L1 -619 5545 5055 458 360 19 6 chr5 103185233 103185394 -99900138 - MIR3 SINE MIR -11 197 35 2326 113 88 13 chr5 103185699 103186096 -99899436 + MSTA LTR MaLR 1 427 -1 459 194 0 35 chr5 103186657 103186827 -99898705 + (TA)n Simple_repeat Simple_repeat 2 165 0 1717 189 23 14 chr5 103187225 103187569 -99897963 - MER7A DNA MER2_type 0 346 2 24 32 0 0 chr5 103188462 103188493 -99897039 + AT_rich Low_complexity Low_complexity 1 31 0 2252 219 85 25 chr5 103188817 103189525 -99896007 - L1MC4a LINE L1 -346 5818 5193 294 179 0 0 chr5 103189651 103189707 -99895825 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 185 344 74 33 chr5 103189833 103189955 -99895577 - L2 LINE L2 -9 3263 3137 782 453 53 28 chr5 103190049 103190371 -99895161 - MER2 DNA MER2_type -1 344 15 320 276 0 0 chr5 103190461 103190537 -99894995 - LTR33A LTR ERVL -2 521 446 279 110 137 82 chr5 103190826 103190899 -99894633 - MLT1J LTR MaLR -340 171 95 199 230 207 35 chr5 103191312 103191399 -99894133 - MIR SINE MIR -99 163 62 242 179 18 0 chr5 103191411 103191467 -99894065 + CT-rich Low_complexity Low_complexity 4 60 0 216 0 0 0 chr5 103192693 103192717 -99892815 + (T)n Simple_repeat Simple_repeat 1 24 0 1797 128 32 3 chr5 103194251 103194533 -99890999 + MER7A DNA MER2_type 57 344 -2 192 77 0 0 chr5 103194996 103195022 -99890510 + (GCTTG)n Simple_repeat Simple_repeat 3 28 0 1753 47 0 5 chr5 103195398 103195612 -99889920 + AluY SINE Alu 91 303 -8 189 240 173 13 chr5 103195916 103195991 -99889541 + MIR SINE MIR 175 261 -1 287 105 18 0 chr5 103196121 103196178 -99889354 + (TA)n Simple_repeat Simple_repeat 1 58 0 5780 86 20 2 chr5 103196659 103197464 -99888068 + L1PA14 LINE L1 5334 6152 -9 382 293 160 14 chr5 103198594 103198806 -99886726 + MIR SINE MIR 4 246 -16 260 288 65 77 chr5 103198868 103199038 -99886494 - L2 LINE L2 -1 3271 3104 281 271 86 93 chr5 103199050 103199201 -99886331 + L2 LINE L2 3122 3271 -1 280 320 78 23 chr5 103199226 103199354 -99886178 - L2 LINE L2 -191 3081 2947 691 230 209 5 chr5 103199479 103199670 -99885862 - MIR SINE MIR 0 262 33 1307 244 114 26 chr5 103199693 103200214 -99885318 - L2 LINE L2 -1 3312 2746 3240 228 69 32 chr5 103200952 103202856 -99882676 - L1ME2 LINE L1 -9 6224 4242 183 80 0 0 chr5 103202856 103202881 -99882651 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3240 228 69 32 chr5 103202881 103203092 -99882440 - L1ME2 LINE L1 -1991 4242 4040 1521 291 50 82 chr5 103203098 103204823 -99880709 - L1ME2 LINE L1 -4686 1710 40 297 128 0 0 chr5 103205443 103205490 -99880042 + (CA)n Simple_repeat Simple_repeat 2 48 0 956 172 21 11 chr5 103206343 103206529 -99879003 - Tigger6a DNA MER2_type 0 1083 896 4517 163 31 26 chr5 103206574 103207810 -99877722 + L1PA16 LINE L1 4456 5643 -523 2098 176 45 36 chr5 103207810 103207970 -99877562 + MSTB LTR MaLR 3 160 -266 2307 89 7 0 chr5 103207970 103208262 -99877270 - AluY SINE Alu -17 294 1 2098 176 45 36 chr5 103208262 103208521 -99877011 + MSTB LTR MaLR 160 426 0 4517 163 31 26 chr5 103208521 103208856 -99876676 + L1PA16 LINE L1 5643 5975 -191 * 6926 125 29 9 chr5 103208855 103209786 -99875746 + L1MA3 LINE L1 4125 5036 -1269 2016 116 25 0 chr5 103209786 103210062 -99875470 + AluSx SINE Alu 30 312 0 6926 125 29 9 chr5 103210062 103211268 -99874264 + L1MA3 LINE L1 5036 6305 0 1031 141 70 0 chr5 103211290 103211475 -99874057 + L1PA16 LINE L1 5959 6156 -10 2909 193 179 8 chr5 103211488 103212264 -99873268 - Tigger6a DNA MER2_type -174 909 1 1591 207 17 3 chr5 103212946 103213236 -99872296 - AluJo SINE Alu -18 294 1 804 300 43 23 chr5 103213709 103213966 -99871566 + MIR SINE MIR 1 262 0 468 35 0 0 chr5 103214492 103214550 -99870982 + (TG)n Simple_repeat Simple_repeat 2 59 0 1488 216 19 30 chr5 103214755 103215121 -99870411 + MLT1A1 LTR MaLR 4 365 0 27 29 0 0 chr5 103215932 103215966 -99869566 + AT_rich Low_complexity Low_complexity 1 34 0 562 152 38 0 chr5 103217490 103217595 -99867937 + MER5A DNA MER1_type 4 112 -77 264 314 48 19 chr5 103218383 103218488 -99867044 + L3b LINE CR1 1299 1406 -177 599 259 0 25 chr5 103218689 103218851 -99866681 - MIR SINE MIR -103 159 2 21 82 0 0 chr5 103219986 103220035 -99865497 + AT_rich Low_complexity Low_complexity 1 49 0 29 28 0 0 chr5 103220237 103220273 -99865259 + AT_rich Low_complexity Low_complexity 1 36 0 554 298 67 14 chr5 103220829 103221037 -99864495 + MIR SINE MIR 25 243 -19 1519 186 44 14 chr5 103221966 103222310 -99863222 + L1MB3 LINE L1 5823 6176 -7 1696 186 29 0 chr5 103222380 103222660 -99862872 + AluJb SINE Alu 1 288 -24 216 0 0 0 chr5 103222660 103222684 -99862848 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 14368 192 66 9 chr5 103222895 103223250 -99862282 - L1PB1 LINE L1 -4 6863 6530 668 61 10 0 chr5 103223250 103223348 -99862184 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 14368 192 66 9 chr5 103223348 103229398 -99856134 - L1PB1 LINE L1 -337 6530 81 2314 123 19 16 chr5 103230364 103230738 -99854794 + THE1C LTR MaLR 1 375 0 331 257 103 7 chr5 103230781 103230917 -99854615 - MER46C DNA MER2_type -12 326 178 838 98 8 0 chr5 103231060 103231183 -99854349 + THE1C LTR MaLR 252 375 0 763 229 73 42 chr5 103231226 103231514 -99854018 - MER46C DNA MER2_type -12 326 30 757 139 0 76 chr5 103231607 103231751 -99853781 + FLAM_C SINE Alu 1 133 0 994 246 113 43 chr5 103231797 103232241 -99853291 - L2 LINE L2 -19 3294 2820 201 250 0 0 chr5 103233095 103233139 -99852393 - L2 LINE L2 -19 3294 3251 356 282 28 42 chr5 103233651 103233793 -99851739 - MIR SINE MIR -113 149 10 234 91 0 0 chr5 103236383 103236416 -99849116 + (GA)n Simple_repeat Simple_repeat 2 34 0 2149 185 29 56 chr5 103239397 103239916 -99845616 + MLT1D LTR MaLR 1 505 0 324 0 0 0 chr5 103242688 103242724 -99842808 + (CA)n Simple_repeat Simple_repeat 2 37 0 192 77 0 0 chr5 103243235 103243261 -99842271 + (CA)n Simple_repeat Simple_repeat 2 27 0 310 233 39 87 chr5 103243385 103243488 -99842044 + MIR SINE MIR 152 249 -13 2084 121 30 41 chr5 103244672 103245011 -99840521 + MER1B DNA MER1_type 3 337 0 402 21 0 0 chr5 103247376 103247423 -99838109 + (TG)n Simple_repeat Simple_repeat 1 47 0 378 107 0 0 chr5 103247502 103247558 -99837974 + (TA)n Simple_repeat Simple_repeat 2 57 0 181 79 0 53 chr5 103248416 103248454 -99837078 + (CATATA)n Simple_repeat Simple_repeat 5 40 0 254 315 83 0 chr5 103248592 103248700 -99836832 + MLT1J LTR MaLR 23 139 -372 263 260 100 20 chr5 103249333 103249433 -99836099 - MLT1J LTR MaLR -65 446 339 253 245 306 0 chr5 103249496 103249594 -99835938 + MIR SINE MIR 65 192 -70 273 235 20 0 chr5 103249632 103249683 -99835849 + L2 LINE L2 3244 3295 -18 585 279 83 26 chr5 103250864 103251093 -99834439 - MIR SINE MIR -19 243 2 22 35 0 0 chr5 103251167 103251196 -99834336 + AT_rich Low_complexity Low_complexity 1 29 0 432 243 237 0 chr5 103251229 103251381 -99834151 - MIR SINE MIR -12 250 63 1981 110 4 0 chr5 103252635 103252898 -99832634 + AluSc SINE Alu 17 280 -29 315 0 0 0 chr5 103252901 103252936 -99832596 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 183 289 22 0 chr5 103253146 103253191 -99832341 + L3b LINE CR1 1405 1450 -133 493 287 88 37 chr5 103253298 103253650 -99831882 + L1ME4a LINE L1 5621 5990 -131 825 249 6 0 chr5 103253725 103253890 -99831642 + FAM SINE Alu 1 166 -9 1977 134 17 0 chr5 103254227 103254525 -99831007 + AluSx SINE Alu 1 303 -9 236 216 59 0 chr5 103258027 103258078 -99827454 - L2 LINE L2 -2 3270 3217 258 141 26 51 chr5 103258606 103258684 -99826848 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 227 222 167 0 chr5 103259352 103259442 -99826090 - MLT1H LTR MaLR 0 549 445 686 263 148 42 chr5 103259500 103259877 -99825655 - MLT1H LTR MaLR -128 421 5 443 336 109 50 chr5 103259878 103260235 -99825297 + L2 LINE L2 2890 3267 -5 2119 125 0 26 chr5 103260356 103260660 -99824872 - AluSx SINE Alu -16 296 1 229 132 19 19 chr5 103262217 103262270 -99823262 + GA-rich Low_complexity Low_complexity 1 53 0 288 0 0 0 chr5 103265173 103265205 -99820327 + (CAT)n Simple_repeat Simple_repeat 2 33 0 655 188 0 0 chr5 103267808 103267909 -99817623 - Tigger3(Golem) DNA MER2_type -1 3028 2928 3168 211 129 53 chr5 103268644 103269697 -99815835 - L1MC4 LINE L1 0 8042 6910 497 295 65 20 chr5 103269855 103270055 -99815477 + L2 LINE L2 2855 3063 -250 22 0 0 0 chr5 103271295 103271317 -99814215 + AT_rich Low_complexity Low_complexity 1 22 0 1675 135 42 0 chr5 103271487 103271776 -99813756 + MER33 DNA MER1_type 2 302 -22 264 303 30 0 chr5 103272168 103272234 -99813298 + L2 LINE L2 2290 2357 -957 369 241 109 48 chr5 103272290 103272598 -99812934 + LTR40c LTR ERVL 124 411 -51 429 345 105 19 chr5 103272613 103272938 -99812594 + L2 LINE L2 2344 2696 -618 910 135 0 0 chr5 103273228 103273376 -99812156 + L1MA9 LINE L1 6165 6312 0 2463 41 7 3 chr5 103273608 103273903 -99811629 - AluY SINE Alu -15 296 1 613 312 52 84 chr5 103274010 103274353 -99811179 + L2 LINE L2 2941 3272 0 410 96 14 0 chr5 103274456 103274529 -99811003 + (TC)n Simple_repeat Simple_repeat 1 74 0 1820 202 123 56 chr5 103274552 103275033 -99810499 + MLT2B1 LTR ERVL 8 520 0 723 214 57 38 chr5 103276166 103276376 -99809156 + MER58A DNA MER1_type 2 215 -9 40549 70 5 3 chr5 103276381 103282513 -99803019 + L1PA6 LINE L1 4 6148 -6 1189 210 32 91 chr5 103282894 103283266 -99802266 - MLT2B1 LTR ERVL -64 350 1 373 217 78 121 chr5 103284980 103285088 -99800444 + MER103 DNA DNA 8 108 -58 757 170 92 7 chr5 103285088 103285241 -99800291 + FRAM SINE Alu 1 166 0 373 217 78 121 chr5 103285241 103285298 -99800234 + MER103 DNA DNA 108 166 0 1848 178 0 0 chr5 103285719 103286011 -99799521 - AluJb SINE Alu -20 292 1 2874 271 89 52 chr5 103286543 103288300 -99797232 + L1ME LINE L1 36 1858 -4538 1652 162 12 53 chr5 103288305 103288626 -99796906 + AluJo SINE Alu 3 310 -2 324 227 30 0 chr5 103288710 103288776 -99796756 + MER21B LTR ERV1 1 68 -795 3292 213 14 14 chr5 103288809 103289461 -99796071 + MER21B LTR ERV1 19 670 -193 683 211 158 18 chr5 103289603 103290017 -99795515 + L1ME LINE L1 1974 2496 -3900 285 29 0 0 chr5 103290141 103290175 -99795357 + (CA)n Simple_repeat Simple_repeat 2 35 0 2574 223 50 35 chr5 103290175 103290955 -99794577 + L1ME LINE L1 3969 4760 -1455 23 0 0 0 chr5 103290959 103290982 -99794550 + AT_rich Low_complexity Low_complexity 1 23 0 5442 115 20 48 chr5 103290982 103291886 -99793646 - LTR5 LTR ERVK -90 879 1 694 105 0 0 chr5 103291886 103291981 -99793551 - HERVK LTR ERVK 0 7243 7149 484 114 0 0 chr5 103292190 103292260 -99793272 - HERVK LTR ERVK -1710 5533 5464 * 773 116 0 9 chr5 103292256 103292368 -99793164 - HERVK LTR ERVK -7132 111 1 668 163 54 14 chr5 103292368 103292515 -99793017 - LTR5 LTR ERVK 0 969 817 1317 237 94 38 chr5 103292549 103293035 -99792497 + L1ME LINE L1 4749 5277 -938 2387 100 0 6 chr5 103293035 103293346 -99792186 + AluSx SINE Alu 1 309 -3 1317 237 94 38 chr5 103293346 103293462 -99792070 + L1ME LINE L1 5277 5385 -830 765 203 59 45 chr5 103293548 103293820 -99791712 + L1ME LINE L1 5381 5651 -580 226 130 0 22 chr5 103293824 103293870 -99791662 + L1ME1 LINE L1 6117 6161 -5 293 199 161 68 chr5 103294156 103294317 -99791215 - Charlie8 DNA MER1_type -2139 278 103 6185 82 7 6 chr5 103294975 103295822 -99789710 + L1PA11 LINE L1 5327 6174 0 25 31 0 0 chr5 103295986 103296018 -99789514 + AT_rich Low_complexity Low_complexity 1 32 0 2211 129 42 22 chr5 103296437 103296794 -99788738 + THE1B LTR MaLR 1 364 0 11511 102 6 1 chr5 103296794 103298365 -99787167 + THE1B-int LTR MaLR 1 1580 0 2053 122 102 15 chr5 103298365 103298700 -99786832 + THE1B LTR MaLR 1 364 0 7360 41 2 1 chr5 103299361 103300394 -99785138 + L1PA6 LINE L1 5120 6153 -1 2099 117 0 23 chr5 103300636 103300945 -99784587 - AluSx SINE Alu -10 302 1 1690 141 0 4 chr5 103301228 103301477 -99784055 - AluSx SINE Alu -32 280 33 653 130 0 0 chr5 103301486 103301586 -99783946 + L1P LINE L1 4537 4636 -1510 6960 38 7 0 chr5 103301985 103303318 -99782214 - L1PA6 LINE L1 -1 6153 4790 1842 167 33 6 chr5 103303423 103303759 -99781773 - MER7A DNA MER2_type -1 345 3 206 195 24 0 chr5 103303851 103303892 -99781640 - L3 LINE CR1 -9 1568 1527 216 278 0 56 chr5 103303931 103304003 -99781529 + L2 LINE L2 3246 3313 0 682 216 78 0 chr5 103305551 103305718 -99779814 + L1ME LINE L1 5537 5716 -405 656 256 126 19 chr5 103306263 103306470 -99779062 - MIR SINE MIR -6 256 28 22 56 0 0 chr5 103307648 103307684 -99777848 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr5 103307913 103307939 -99777593 + AT_rich Low_complexity Low_complexity 1 26 0 231 36 0 0 chr5 103307992 103308020 -99777512 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr5 103308266 103308302 -99777230 + AT_rich Low_complexity Low_complexity 1 36 0 1777 162 26 87 chr5 103308747 103309136 -99776396 - MLT1A1 LTR MaLR 0 365 1 2399 67 3 3 chr5 103309149 103309448 -99776084 + AluY SINE Alu 1 299 -12 2123 115 7 7 chr5 103312689 103313007 -99772525 - AluSg SINE Alu 0 310 1 477 306 86 34 chr5 103313231 103313555 -99771977 + L1M4c LINE L1 277 617 -6029 3783 228 49 34 chr5 103313679 103316485 -99769047 + L1M4c LINE L1 825 3760 -2884 * 16195 133 11 104 chr5 103316453 103319971 -99765561 + L1PA7 LINE L1 500 3691 -2953 5426 10 0 0 chr5 103319972 103320579 -99764953 + L1PA3 LINE L1 5545 6151 -4 15440 88 9 10 chr5 103320592 103323564 -99761968 + L1PA7 LINE L1 3674 6652 0 1819 125 61 25 chr5 103323564 103323891 -99761641 + Tigger1 DNA MER2_type 2080 2418 0 828 174 0 0 chr5 103324710 103324930 -99760602 + (TGG)n Simple_repeat Simple_repeat 1 220 0 324 318 137 82 chr5 103324930 103325405 -99760127 - L1M2 LINE L1 -5377 1472 972 197 227 0 13 chr5 103325416 103325491 -99760041 + (TGG)n Simple_repeat Simple_repeat 1 74 0 481 155 16 96 chr5 103325656 103325843 -99759689 - L1 LINE L1 -1701 4445 4274 629 212 3 119 chr5 103326031 103326418 -99759114 - L1 LINE L1 -2018 4128 3787 224 111 22 0 chr5 103326419 103326464 -99759068 + (TGG)n Simple_repeat Simple_repeat 1 46 0 5788 209 69 59 chr5 103326497 103326523 -99759009 + L1MC4a LINE L1 3191 3215 -2959 2844 203 9 23 chr5 103326523 103327085 -99758447 + MLT2B3 LTR ERVL 1 554 0 5788 209 69 59 chr5 103327085 103329410 -99756122 + L1MC4a LINE L1 3215 5398 -776 1457 165 72 14 chr5 103329410 103329689 -99755843 + AluSx SINE Alu 1 295 -17 5788 209 69 59 chr5 103329689 103330080 -99755452 + L1MC4a LINE L1 5398 5784 -390 815 183 0 0 chr5 103333153 103333295 -99752237 + FLAM_C SINE Alu 1 142 -1 24 0 0 0 chr5 103333331 103333355 -99752177 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 103333957 103333993 -99751539 + AT_rich Low_complexity Low_complexity 1 36 0 14576 116 36 38 chr5 103334370 103335755 -99749777 + Tigger1 DNA MER2_type 1 1386 -1032 1418 154 101 15 chr5 103335755 103336022 -99749510 - AluSx SINE Alu -18 294 5 14576 116 36 38 chr5 103336022 103336427 -99749105 + Tigger1 DNA MER2_type 1386 1790 -628 237 33 0 0 chr5 103336427 103336457 -99749075 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2142 131 0 0 chr5 103336465 103336763 -99748769 - AluSx SINE Alu -14 298 1 14576 116 36 38 chr5 103336763 103337383 -99748149 + Tigger1 DNA MER2_type 1797 2418 0 352 273 93 126 chr5 103337596 103337874 -99747658 + L1ME1 LINE L1 242 510 -5609 379 289 147 26 chr5 103337917 103338408 -99747124 + L1MC4a LINE L1 5821 6370 -1438 2739 170 53 2 chr5 103338603 103339097 -99746435 + MER68 LTR ERV1 44 562 0 241 172 97 43 chr5 103339097 103339190 -99746342 + L1MC5 LINE L1 7422 7519 -442 438 312 77 9 chr5 103339400 103339621 -99745911 + L1ME1 LINE L1 3395 3630 -2499 2708 70 8 14 chr5 103339622 103339978 -99745554 - THE1A LTR MaLR -1 354 1 11274 96 9 11 chr5 103339980 103341560 -99743972 - THE1A-int LTR MaLR -2 1578 1 2381 97 5 46 chr5 103341560 103341930 -99743602 - THE1A LTR MaLR 0 355 1 1784 287 97 36 chr5 103342111 103342434 -99743098 + L1ME1 LINE L1 3773 4075 -2054 2233 99 0 0 chr5 103342434 103342756 -99742776 - AluSq SINE Alu 0 322 1 1784 287 97 36 chr5 103342756 103343798 -99741734 + L1ME1 LINE L1 4075 5223 -906 517 313 161 12 chr5 103343853 103344370 -99741162 + L1ME1 LINE L1 5333 5926 -223 708 193 78 62 chr5 103344384 103344576 -99740956 + MER3 DNA MER1_type 15 209 0 236 161 36 36 chr5 103344532 103344588 -99740944 - MER3 DNA MER1_type -119 90 35 * 22 70 0 0 chr5 103344856 103344899 -99740633 + AT_rich Low_complexity Low_complexity 1 43 0 1805 171 115 43 chr5 103346161 103346553 -99738979 + MLT2B1 LTR ERVL 1 420 -100 5715 115 60 57 chr5 103346579 103346722 -99738810 + Tigger3b DNA MER2_type 1 142 -2886 2153 139 12 18 chr5 103346722 103347061 -99738471 + MER1B DNA MER1_type 1 337 0 5715 115 60 57 chr5 103347061 103348065 -99737467 + Tigger3b DNA MER2_type 142 1231 0 294 146 0 0 chr5 103348065 103348110 -99737422 + MLT2B1 LTR ERVL 471 515 0 5153 134 20 0 chr5 103348113 103348917 -99736615 + L1PA16 LINE L1 5338 6157 -9 460 271 49 35 chr5 103350619 103350763 -99734769 + L2 LINE L2 3168 3313 0 520 279 75 50 chr5 103351597 103351798 -99733734 - MIR SINE MIR -21 241 36 643 184 16 32 chr5 103353062 103353187 -99732345 - FLAM_A SINE Alu -7 126 4 303 316 188 0 chr5 103353525 103353658 -99731874 - MIR SINE MIR -71 191 34 189 241 52 17 chr5 103353667 103353725 -99731807 + MIR SINE MIR 102 161 -101 21 0 0 0 chr5 103354054 103354075 -99731457 + AT_rich Low_complexity Low_complexity 1 21 0 27 35 0 0 chr5 103355549 103355578 -99729954 + AT_rich Low_complexity Low_complexity 1 29 0 547 172 10 68 chr5 103356089 103356281 -99729251 + L1P LINE L1 4742 4922 -1224 6453 85 10 0 chr5 103356999 103358385 -99727147 + L1PA14 LINE L1 4742 6144 -17 12709 107 6 39 chr5 103358573 103360785 -99724747 + L1P3 LINE L1 1 2201 -4260 288 0 0 0 chr5 103361285 103361317 -99724215 + (ATG)n Simple_repeat Simple_repeat 2 33 0 17500 91 8 11 chr5 103363257 103366146 -99719386 + L1P3 LINE L1 2393 5268 -1193 192 327 20 20 chr5 103367162 103367263 -99718269 - L2 LINE L2 -22 3291 3191 2904 204 8 11 chr5 103367754 103367989 -99717543 - L1 LINE L1 -941 5205 4971 2233 123 19 25 chr5 103367989 103368354 -99717178 - THE1B LTR MaLR -1 363 1 2904 204 8 11 chr5 103368354 103368769 -99716763 - L1 LINE L1 -1175 4971 4557 28 0 0 0 chr5 103369089 103369117 -99716415 + AT_rich Low_complexity Low_complexity 1 28 0 668 235 67 0 chr5 103371147 103371296 -99714236 - MIR SINE MIR -1 261 103 728 130 38 2 chr5 103371380 103371620 -99713912 + AluSx SINE Alu 1 295 -17 539 318 40 6 chr5 103371710 103371883 -99713649 - MIR SINE MIR -50 212 34 235 239 9 53 chr5 103372814 103372927 -99712605 + A-rich Low_complexity Low_complexity 2 109 0 8149 142 56 11 chr5 103373073 103374298 -99711234 + L1M2 LINE L1 3677 5009 -1291 2386 109 19 25 chr5 103374298 103374664 -99710868 + THE1B LTR MaLR 1 364 0 8149 142 56 11 chr5 103374664 103375332 -99710200 + L1M2 LINE L1 5009 5646 -654 2173 170 23 0 chr5 103375332 103375721 -99709811 + MER6 DNA MER2_type 1 398 -467 1737 177 7 10 chr5 103375721 103376009 -99709523 + AluJb SINE Alu 1 287 -25 24 0 0 0 chr5 103376009 103376033 -99709499 + AT_rich Low_complexity Low_complexity 1 24 0 1089 177 74 26 chr5 103378019 103378290 -99707242 + MER96B DNA MER1_type? 1 284 -133 21 0 0 0 chr5 103378505 103378526 -99707006 + AT_rich Low_complexity Low_complexity 1 21 0 943 205 15 10 chr5 103378575 103378780 -99706752 - MER20 DNA MER1_type -12 207 2 392 285 88 64 chr5 103379324 103379791 -99705741 + L1MEd LINE L1 574 1051 -5068 871 219 116 105 chr5 103379892 103380322 -99705210 + HsTC2 DNA Tc2 2 436 -1462 28 48 0 0 chr5 103380338 103380380 -99705152 + AT_rich Low_complexity Low_complexity 1 42 0 2392 84 7 0 chr5 103380869 103381167 -99704365 + AluSc SINE Alu 1 300 -9 294 313 47 33 chr5 103381377 103381527 -99704005 - MLT1I LTR MaLR -14 395 244 557 277 20 20 chr5 103382212 103382361 -99703171 + MIR SINE MIR 7 154 -64 229 178 22 0 chr5 103382820 103382865 -99702667 + L2 LINE L2 3268 3313 0 2118 141 6 3 chr5 103383011 103383352 -99702180 + MLT2C1 LTR ERVL 1 342 -55 189 107 0 0 chr5 103383373 103383401 -99702131 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 297 193 0 0 chr5 103383401 103383458 -99702074 + MLT2C1 LTR ERVL 464 520 0 2034 154 0 28 chr5 103384808 103385126 -99700406 + AluSx SINE Alu 1 309 -3 3069 38 5 3 chr5 103386687 103387059 -99698473 + L1PA7 LINE L1 5782 6154 0 507 253 12 49 chr5 103388971 103389133 -99696399 - L2 LINE L2 0 3313 3158 1511 139 166 0 chr5 103390061 103390320 -99695212 - AluSx SINE Alu 0 302 1 212 327 20 20 chr5 103391583 103391684 -99693848 - L2 LINE L2 -22 3291 3191 2199 169 80 14 chr5 103393033 103393471 -99692061 + MLT1C LTR MaLR 1 467 0 467 276 99 28 chr5 103393886 103393945 -99691587 + MIR SINE MIR 26 79 -183 14321 130 30 16 chr5 103393945 103394883 -99690649 - Tigger1 DNA MER2_type 0 2418 1495 2369 88 0 3 chr5 103394883 103395178 -99690354 - AluSx SINE Alu -7 305 12 14321 130 30 16 chr5 103395178 103396622 -99688910 - Tigger1 DNA MER2_type -923 1495 1 467 276 99 28 chr5 103396622 103396743 -99688789 + MIR SINE MIR 79 219 -43 2089 95 60 0 chr5 103397559 103397843 -99687689 + AluSp SINE Alu 1 301 -12 22 43 0 21 chr5 103398031 103398058 -99687474 + AT_rich Low_complexity Low_complexity 1 28 -18 1925 152 14 0 chr5 103398058 103398355 -99687177 + AluJo SINE Alu 1 301 -11 22 43 0 21 chr5 103398355 103398374 -99687158 + AT_rich Low_complexity Low_complexity 28 46 0 801 172 0 8 chr5 103398633 103398792 -99686740 + FLAM_C SINE Alu 1 158 0 1778 134 0 8 chr5 103398899 103399161 -99686371 - AluJb SINE Alu -52 260 1 2343 103 0 0 chr5 103400388 103400699 -99684833 + AluY SINE Alu 1 311 0 403 296 40 16 chr5 103401933 103402058 -99683474 + MIR3 SINE MIR 3 130 -78 32 43 0 0 chr5 103402247 103402293 -99683239 + AT_rich Low_complexity Low_complexity 1 46 0 498 274 40 26 chr5 103403494 103403720 -99681812 + L1ME LINE L1 5543 5771 -350 23 68 0 0 chr5 103405032 103405076 -99680456 + AT_rich Low_complexity Low_complexity 1 44 0 24 32 0 0 chr5 103407604 103407635 -99677897 + GC_rich Low_complexity Low_complexity 1 31 0 213 254 0 30 chr5 103411518 103411585 -99673947 + CT-rich Low_complexity Low_complexity 4 68 0 25 0 0 0 chr5 103413790 103413815 -99671717 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 103416483 103416504 -99669028 + GC_rich Low_complexity Low_complexity 1 21 0 222 215 0 65 chr5 103417453 103417546 -99667986 + CT-rich Low_complexity Low_complexity 4 90 0 22 80 0 0 chr5 103418101 103418151 -99667381 + GC_rich Low_complexity Low_complexity 1 50 0 266 0 0 29 chr5 103418525 103418560 -99666972 + (TC)n Simple_repeat Simple_repeat 1 34 0 905 64 35 6 chr5 103419186 103419359 -99666173 + (TC)n Simple_repeat Simple_repeat 1 178 0 390 180 43 0 chr5 103419361 103419500 -99666032 + CT-rich Low_complexity Low_complexity 1 145 0 180 111 0 0 chr5 103419640 103419667 -99665865 + (A)n Simple_repeat Simple_repeat 1 27 0 276 30 0 0 chr5 103420139 103420172 -99665360 + (TG)n Simple_repeat Simple_repeat 1 33 0 594 87 65 0 chr5 103420640 103420778 -99664754 + CT-rich Low_complexity Low_complexity 2 148 0 240 291 0 0 chr5 103420801 103420856 -99664676 + polypyrimidine Low_complexity Low_complexity 2 56 0 189 0 0 0 chr5 103420904 103420925 -99664607 + (GGA)n Simple_repeat Simple_repeat 3 23 0 228 174 0 22 chr5 103421083 103421129 -99664403 + GA-rich Low_complexity Low_complexity 3 47 0 208 356 26 0 chr5 103421547 103421662 -99663870 + (CCCCAG)n Simple_repeat Simple_repeat 4 121 0 183 100 0 0 chr5 103421691 103421721 -99663811 + (CCG)n Simple_repeat Simple_repeat 1 30 0 249 300 0 10 chr5 103421767 103421867 -99663665 + (CGGG)n Simple_repeat Simple_repeat 3 101 0 26 30 0 0 chr5 103421877 103421910 -99663622 + GC_rich Low_complexity Low_complexity 1 33 0 269 172 16 0 chr5 103422163 103422227 -99663305 + (CGG)n Simple_repeat Simple_repeat 3 67 0 269 87 0 22 chr5 103422277 103422323 -99663209 + (CCCCCT)n Simple_repeat Simple_repeat 4 48 0 24 0 0 0 chr5 103422324 103422348 -99663184 + GC_rich Low_complexity Low_complexity 1 24 0 184 95 0 48 chr5 103422485 103422527 -99663005 + (CGG)n Simple_repeat Simple_repeat 3 42 0 23 0 0 0 chr5 103424407 103424430 -99661102 + AT_rich Low_complexity Low_complexity 1 23 0 26 101 0 0 chr5 103425842 103425931 -99659601 + GC_rich Low_complexity Low_complexity 1 89 0 27 29 0 0 chr5 103426029 103426063 -99659469 + GC_rich Low_complexity Low_complexity 1 34 0 328 82 33 0 chr5 103426162 103426223 -99659309 + (TG)n Simple_repeat Simple_repeat 1 63 0 29 0 0 0 chr5 103429742 103429771 -99655761 + AT_rich Low_complexity Low_complexity 1 29 0 253 333 8 17 chr5 103439058 103439175 -99646357 + GA-rich Low_complexity Low_complexity 1 116 0 254 125 21 0 chr5 103441144 103441192 -99644340 + (CA)n Simple_repeat Simple_repeat 1 49 0 201 74 0 0 chr5 103441963 103441990 -99643542 + (GAA)n Simple_repeat Simple_repeat 2 28 0 537 132 7 44 chr5 103442069 103442205 -99643327 + (TTCC)n Simple_repeat Simple_repeat 2 132 0 315 0 0 0 chr5 103443624 103443659 -99641873 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 71 0 0 chr5 103444144 103444172 -99641360 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr5 103449487 103449511 -99636021 + GC_rich Low_complexity Low_complexity 1 24 0 4597 138 69 12 chr5 103450166 103451051 -99634481 - Tigger1 DNA MER2_type -1483 935 1 845 185 21 16 chr5 103452198 103452387 -99633145 + AluJo SINE Alu 21 210 -102 1681 139 33 7 chr5 103452428 103452702 -99632830 - AluJb SINE Alu -31 281 1 199 26 0 79 chr5 103453302 103453340 -99632192 + (AGGGGG)n Simple_repeat Simple_repeat 2 36 0 696 306 79 45 chr5 103453552 103454170 -99631362 - L2 LINE L2 -28 3285 2646 321 370 68 37 chr5 103454527 103455011 -99630521 + L2 LINE L2 2345 2843 -471 1162 182 178 8 chr5 103455338 103455580 -99629952 - AluSg SINE Alu -17 283 1 2199 82 10 0 chr5 103455638 103455944 -99629588 + AluSc SINE Alu 1 309 0 2183 103 6 0 chr5 103456281 103456592 -99628940 - AluSq SINE Alu 0 313 1 1930 107 79 0 chr5 103456978 103457258 -99628274 - AluSx SINE Alu -10 302 1 2036 199 0 8 chr5 103457835 103458196 -99627336 + MLT1A1 LTR MaLR 1 358 -7 323 261 0 0 chr5 103458228 103458316 -99627216 - L1M4 LINE L1 -1602 4544 4457 3610 150 20 79 chr5 103458386 103459168 -99626364 - L1MD1 LINE L1 -20 6222 5487 466 213 7 28 chr5 103459139 103459280 -99626252 - L1MD1 LINE L1 -1388 4758 4621 * 1472 252 58 26 chr5 103459296 103459830 -99625702 + MER77 LTR ERV1 41 690 -4 364 256 26 8 chr5 103459842 103459959 -99625573 - L1MD1 LINE L1 -1521 4625 4507 402 236 135 44 chr5 103459984 103460050 -99625482 - L1MD1 LINE L1 -1742 4404 4345 1809 123 3 55 chr5 103460050 103460360 -99625172 + AluSp SINE Alu 1 294 -19 402 236 135 44 chr5 103460360 103460522 -99625010 - L1MD1 LINE L1 -1801 4345 4155 2154 77 0 59 chr5 103461284 103461608 -99623924 + AluSg SINE Alu 1 305 -5 2140 101 0 10 chr5 103461683 103461980 -99623552 + AluSx SINE Alu 1 294 -18 357 24 0 0 chr5 103462075 103462117 -99623415 + (TG)n Simple_repeat Simple_repeat 2 43 0 310 179 54 0 chr5 103462126 103462182 -99623350 + L1MCa LINE L1 2006 2064 -4362 2195 105 0 0 chr5 103462440 103462734 -99622798 + AluSg SINE Alu 2 295 -15 944 206 14 14 chr5 103463497 103463715 -99621817 - AluJb SINE Alu -7 305 88 1443 144 12 101 chr5 103463715 103463894 -99621638 - AluJo SINE Alu -15 297 158 1842 151 3 7 chr5 103463894 103464193 -99621339 - AluSx SINE Alu -14 298 1 1443 144 12 101 chr5 103464193 103464339 -99621193 - AluJo SINE Alu -154 158 1 2124 114 3 3 chr5 103465007 103465313 -99620219 - AluSp SINE Alu -7 306 1 423 333 61 6 chr5 103465414 103465579 -99619953 - MIR SINE MIR -17 245 72 442 238 67 0 chr5 103465580 103465685 -99619847 + L2 LINE L2 3193 3304 -9 2296 102 0 7 chr5 103466811 103467115 -99618417 + AluSc SINE Alu 1 302 -7 658 206 92 99 chr5 103468352 103468745 -99616787 - L1MC4 LINE L1 -1 8041 7652 2008 128 0 7 chr5 103468763 103469045 -99616487 - AluSg SINE Alu -30 280 1 1975 132 45 0 chr5 103469050 103469338 -99616194 - AluSx SINE Alu -6 306 6 1812 169 0 10 chr5 103469381 103469682 -99615850 + AluJb SINE Alu 2 299 -13 30 27 0 0 chr5 103469683 103469720 -99615812 + AT_rich Low_complexity Low_complexity 1 37 0 349 277 177 0 chr5 103470526 103470656 -99614876 - L1ME4a LINE L1 -27 6094 5942 682 292 60 58 chr5 103470776 103471224 -99614308 + L1ME LINE L1 46 494 -5576 297 125 0 0 chr5 103471669 103471725 -99613807 + (T)n Simple_repeat Simple_repeat 1 56 0 28 29 0 0 chr5 103472378 103472413 -99613119 + AT_rich Low_complexity Low_complexity 1 35 0 258 103 0 0 chr5 103478173 103478212 -99607320 + CER Satellite Satellite 26 64 -32 200 134 30 30 chr5 103480302 103480369 -99605163 + (CCCCG)n Simple_repeat Simple_repeat 3 69 0 28 0 0 0 chr5 103481253 103481281 -99604251 + AT_rich Low_complexity Low_complexity 1 28 0 2771 219 52 10 chr5 103483704 103484420 -99601112 + MER20B DNA MER1_type 1 746 -37 15664 118 9 19 chr5 103485568 103486519 -99599013 - Tigger1 DNA MER2_type 0 2418 1459 2250 106 10 3 chr5 103486519 103486820 -99598712 - AluSg SINE Alu -7 303 1 15664 118 9 19 chr5 103486820 103487133 -99598399 - Tigger1 DNA MER2_type -959 1459 1144 2269 88 34 3 chr5 103487133 103487428 -99598104 - AluSc SINE Alu -5 304 1 15664 118 9 19 chr5 103487428 103488605 -99596927 - Tigger1 DNA MER2_type -1274 1144 1 1040 188 5 16 chr5 103489753 103489945 -99595587 + AluJo SINE Alu 21 210 -102 1884 145 28 10 chr5 103489974 103490264 -99595268 - AluJb SINE Alu -17 295 1 199 26 0 79 chr5 103490864 103490902 -99594630 + (AGGGGG)n Simple_repeat Simple_repeat 2 36 0 675 306 79 45 chr5 103491114 103491732 -99593800 - L2 LINE L2 -28 3285 2646 322 370 68 37 chr5 103492089 103492573 -99592959 + L2 LINE L2 2345 2843 -471 1319 142 179 8 chr5 103492902 103493142 -99592390 - AluSg SINE Alu -19 281 1 2029 107 79 0 chr5 103493528 103493808 -99591724 - AluSx SINE Alu -10 302 1 1889 199 0 8 chr5 103494385 103494746 -99590786 + MLT1A1 LTR MaLR 1 358 -7 296 250 0 0 chr5 103494782 103494866 -99590666 - L1M4 LINE L1 -1606 4540 4457 3299 155 18 79 chr5 103494936 103495709 -99589823 - L1MD1 LINE L1 -20 6222 5497 445 209 7 29 chr5 103495692 103495831 -99589701 - L1MD1 LINE L1 -1390 4756 4621 * 1329 257 48 15 chr5 103495847 103496340 -99589192 + MER77 LTR ERV1 41 601 -4 345 257 0 9 chr5 103496393 103496502 -99589030 - L1MD1 LINE L1 -1521 4625 4518 338 240 135 44 chr5 103496535 103496601 -99588931 - L1MD1 LINE L1 -1742 4404 4345 2095 100 3 55 chr5 103496601 103496911 -99588621 + AluSp SINE Alu 1 294 -19 338 240 135 44 chr5 103496911 103497073 -99588459 - L1MD1 LINE L1 -1801 4345 4155 2243 80 0 59 chr5 103497835 103498159 -99587373 + AluSg SINE Alu 1 305 -5 2245 101 0 10 chr5 103498234 103498531 -99587001 + AluSx SINE Alu 1 294 -18 357 24 0 0 chr5 103498626 103498668 -99586864 + (TG)n Simple_repeat Simple_repeat 2 43 0 306 286 0 22 chr5 103498678 103498769 -99586763 + L1MC4 LINE L1 6614 6702 -1340 2314 105 0 0 chr5 103499027 103499321 -99586211 + AluSg SINE Alu 2 295 -15 1018 191 28 28 chr5 103500087 103500302 -99585230 - AluJb SINE Alu -10 302 88 1568 144 12 101 chr5 103500302 103500481 -99585051 - AluJo SINE Alu -15 297 158 1976 151 3 7 chr5 103500481 103500780 -99584752 - AluSx SINE Alu -14 298 1 1568 144 12 101 chr5 103500780 103500926 -99584606 - AluJo SINE Alu -154 158 1 2248 114 3 3 chr5 103501594 103501900 -99583632 - AluSp SINE Alu -7 306 1 412 333 61 6 chr5 103502001 103502166 -99583366 - MIR SINE MIR -17 245 72 435 238 67 0 chr5 103502167 103502272 -99583260 + L2 LINE L2 3193 3304 -9 2311 99 0 7 chr5 103503398 103503702 -99581830 + AluSc SINE Alu 1 302 -7 658 206 92 99 chr5 103504941 103505334 -99580198 - L1MC4 LINE L1 -1 8041 7652 2008 128 0 7 chr5 103505352 103505634 -99579898 - AluSg SINE Alu -30 280 1 1975 132 45 0 chr5 103505639 103505927 -99579605 - AluSx SINE Alu -6 306 6 1802 170 0 10 chr5 103505970 103506270 -99579262 + AluJb SINE Alu 2 298 -14 30 27 0 0 chr5 103506273 103506310 -99579222 + AT_rich Low_complexity Low_complexity 1 37 0 440 173 106 0 chr5 103507698 103507802 -99577730 + AluSq/x SINE Alu 1 115 -198 362 268 313 17 chr5 103509028 103509207 -99576325 - MIR SINE MIR -16 246 15 181 338 71 39 chr5 103509736 103509809 -99575723 - L2 LINE L2 0 3313 3244 2200 134 0 0 chr5 103509809 103510108 -99575424 - AluSx SINE Alu -13 299 1 181 338 71 39 chr5 103510108 103510188 -99575344 - L2 LINE L2 -69 3244 3155 316 213 0 0 chr5 103510308 103510369 -99575163 - MARNA DNA Mariner -170 416 356 787 183 23 23 chr5 103510369 103510544 -99574988 + MIR SINE MIR 88 262 0 1794 175 45 14 chr5 103511101 103511455 -99574077 + MLT1A1 LTR MaLR 1 365 0 291 311 158 71 chr5 103511536 103511665 -99573867 + L2 LINE L2 2526 2677 -637 2029 158 3 23 chr5 103511665 103512007 -99573525 - MER1B DNA MER1_type -1 336 2 291 311 158 71 chr5 103512007 103512060 -99573472 + L2 LINE L2 2677 2724 -590 309 267 147 0 chr5 103512836 103512952 -99572580 - L1ME4a LINE L1 -47 6074 5942 725 285 52 69 chr5 103513072 103513567 -99571965 + L1ME LINE L1 46 532 -5538 358 214 39 0 chr5 103513725 103513828 -99571704 + L1ME LINE L1 521 627 -5443 1511 271 76 40 chr5 103513961 103514524 -99571008 + L1ME LINE L1 618 1159 -4961 1696 180 10 13 chr5 103514524 103514829 -99570703 + AluJo SINE Alu 1 304 -8 1511 271 76 40 chr5 103514829 103514955 -99570577 + L1ME LINE L1 1159 1279 -4841 1951 152 3 3 chr5 103514955 103515251 -99570281 - AluJb SINE Alu -16 296 1 1511 271 76 40 chr5 103515251 103515948 -99569584 + L1ME LINE L1 1279 2153 -3967 442 213 88 37 chr5 103516816 103516952 -99568580 + MIR SINE MIR 86 228 -34 2392 58 0 14 chr5 103517063 103517357 -99568175 + AluY SINE Alu 22 311 0 301 200 0 0 chr5 103517412 103517472 -99568060 - MER103 DNA DNA -81 85 26 399 355 20 30 chr5 103517567 103517764 -99567768 - MIR SINE MIR -55 207 13 452 301 62 0 chr5 103517822 103517935 -99567597 - L2 LINE L2 -5 3267 3148 507 295 52 21 chr5 103518781 103518974 -99566558 + MIR SINE MIR 8 206 -56 595 177 90 35 chr5 103519681 103519929 -99565603 + L2 LINE L2 3082 3311 -2 24 32 0 0 chr5 103520060 103520091 -99565441 + AT_rich Low_complexity Low_complexity 1 31 0 367 263 61 0 chr5 103521399 103521498 -99564034 - L2 LINE L2 -14 3258 3154 234 0 0 0 chr5 103522292 103522318 -99563214 + (CATTT)n Simple_repeat Simple_repeat 2 27 0 303 252 0 81 chr5 103522329 103522440 -99563092 - L2 LINE L2 -52 3261 3160 256 318 0 0 chr5 103523502 103523568 -99561964 - L2 LINE L2 -11 3261 3196 198 308 22 44 chr5 103523717 103523808 -99561724 + L2 LINE L2 3184 3272 0 527 301 160 23 chr5 103523947 103524166 -99561366 - MIR SINE MIR -10 252 4 324 344 39 74 chr5 103524854 103525110 -99560422 - L2 LINE L2 -8 3264 3018 1400 87 111 0 chr5 103525371 103525578 -99559954 + MER30 DNA MER1_type 1 230 0 21 36 0 0 chr5 103525598 103525626 -99559906 + AT_rich Low_complexity Low_complexity 1 28 0 1113 221 70 48 chr5 103526618 103526975 -99558557 - MLT1A1 LTR MaLR 0 365 1 1552 177 7 40 chr5 103527881 103528180 -99557352 - AluJo SINE Alu -5 307 19 1639 79 0 0 chr5 103528250 103528453 -99557079 + AluY SINE Alu 84 286 -25 32 0 0 0 chr5 103528453 103528485 -99557047 + AT_rich Low_complexity Low_complexity 1 32 0 1948 158 7 0 chr5 103528647 103528945 -99556587 - AluJb SINE Alu -12 300 1 23 0 0 0 chr5 103530322 103530345 -99555187 + AT_rich Low_complexity Low_complexity 1 23 0 1375 204 56 11 chr5 103531292 103531562 -99553970 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 103531918 103531940 -99553592 + AT_rich Low_complexity Low_complexity 1 22 0 1669 162 14 7 chr5 103531940 103532224 -99553308 - AluSx SINE Alu -26 286 1 709 309 169 26 chr5 103533776 103534274 -99551258 + L2 LINE L2 2338 2906 -408 2169 107 7 0 chr5 103536134 103536425 -99549107 - AluSc SINE Alu -15 294 2 225 96 19 39 chr5 103537180 103537232 -99548300 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr5 103538761 103538782 -99546750 + AT_rich Low_complexity Low_complexity 1 21 0 198 283 17 17 chr5 103540439 103540499 -99545033 + MIR3 SINE MIR 126 185 -23 399 292 31 0 chr5 103540579 103540709 -99544823 + L2 LINE L2 3179 3312 -1 2247 105 0 0 chr5 103542292 103542586 -99542946 + AluSx SINE Alu 1 294 -18 25 0 0 0 chr5 103543324 103543349 -99542183 + AT_rich Low_complexity Low_complexity 1 25 0 378 299 0 34 chr5 103544193 103544310 -99541222 - MIR SINE MIR -77 131 19 200 353 59 0 chr5 103544623 103544691 -99540841 + L3b LINE CR1 1510 1581 -2 256 192 39 64 chr5 103544851 103544929 -99540603 + MER103 DNA DNA 68 143 -23 23 33 0 0 chr5 103546322 103546352 -99539180 + AT_rich Low_complexity Low_complexity 1 30 0 429 97 0 0 chr5 103546986 103547058 -99538474 + (CAT)n Simple_repeat Simple_repeat 3 74 0 447 237 34 17 chr5 103547869 103547987 -99537545 + L2 LINE L2 3191 3310 -3 359 297 238 10 chr5 103548038 103548240 -99537292 + MIR SINE MIR 15 262 0 193 247 153 47 chr5 103548266 103548351 -99537181 + L2 LINE L2 3220 3313 0 22 35 0 0 chr5 103549074 103549103 -99536429 + AT_rich Low_complexity Low_complexity 1 29 0 228 239 22 0 chr5 103549824 103549870 -99535662 - MIR SINE MIR -22 240 194 388 329 130 40 chr5 103550087 103550534 -99534998 + L2 LINE L2 650 1136 -2178 305 260 121 31 chr5 103550645 103551052 -99534480 + L1MC/D LINE L1 4989 5426 -743 378 344 90 4 chr5 103551103 103551359 -99534173 + L1MC/D LINE L1 5543 5820 -1988 2411 106 0 0 chr5 103551780 103552092 -99533440 - AluSx SINE Alu 0 312 1 637 360 177 10 chr5 103552425 103553002 -99532530 + L2 LINE L2 2257 2929 -385 325 318 35 0 chr5 103553106 103553191 -99532341 + L2 LINE L2 3162 3249 -23 819 122 0 0 chr5 103553507 103553622 -99531910 - AluSp/q SINE Alu -9 304 190 31114 109 13 56 chr5 103553622 103560010 -99525522 + L1PA7 LINE L1 51 6151 -3 2236 122 0 0 chr5 103560597 103560900 -99524632 + AluSx SINE Alu 1 303 -9 24 53 0 0 chr5 103561624 103561662 -99523870 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 103561802 103561825 -99523707 + AT_rich Low_complexity Low_complexity 1 23 0 920 242 114 58 chr5 103562069 103562428 -99523104 - L2 LINE L2 0 3313 2935 404 282 105 48 chr5 103562551 103562675 -99522857 - L2 LINE L2 -3 3269 3139 616 271 28 6 chr5 103562876 103563053 -99522479 - MIR SINE MIR -78 184 4 189 340 117 19 chr5 103565819 103565922 -99519610 + MIR SINE MIR 29 141 -67 278 266 31 0 chr5 103566063 103566127 -99519405 - MIR3 SINE MIR -39 169 104 603 235 53 123 chr5 103566140 103566442 -99519090 + L2 LINE L2 3032 3312 -1 223 271 271 21 chr5 103567128 103567268 -99518264 + MIR SINE MIR 48 222 -40 1400 148 68 42 chr5 103568121 103568385 -99517147 + AluJb SINE Alu 16 286 -26 387 0 0 0 chr5 103569427 103569470 -99516062 + (TG)n Simple_repeat Simple_repeat 2 44 0 2983 179 13 18 chr5 103569787 103570389 -99515143 + L1MB7 LINE L1 5570 6168 -16 2081 113 10 3 chr5 103570403 103570696 -99514836 + AluSc SINE Alu 1 295 -14 32 57 0 0 chr5 103571241 103571294 -99514238 + AT_rich Low_complexity Low_complexity 1 53 0 2274 119 0 0 chr5 103571380 103571692 -99513840 - AluSx SINE Alu 0 312 1 445 219 56 31 chr5 103571782 103571942 -99513590 - L1MC4 LINE L1 -1 8041 7878 2150 132 9 9 chr5 103572212 103572546 -99512986 - MER1B DNA MER1_type 0 337 4 1274 145 59 55 chr5 103572711 103573000 -99512532 + L1MA9 LINE L1 6017 6306 -6 2102 128 3 0 chr5 103573170 103573474 -99512058 + AluSg SINE Alu 1 305 -5 23 33 0 0 chr5 103573476 103573506 -99512026 + AT_rich Low_complexity Low_complexity 1 30 0 216 343 30 10 chr5 103573653 103573752 -99511780 - MIR3 SINE MIR -54 154 54 * 289 211 14 28 chr5 103573751 103573822 -99511710 + MIR SINE MIR 183 252 -10 602 276 15 44 chr5 103574000 103574203 -99511329 + Charlie8 DNA MER1_type 9 205 -2212 23 0 0 0 chr5 103574670 103574693 -99510839 + AT_rich Low_complexity Low_complexity 1 23 0 192 40 0 0 chr5 103575010 103575035 -99510497 + (T)n Simple_repeat Simple_repeat 1 25 0 421 264 33 22 chr5 103575350 103575532 -99510000 + L1M4 LINE L1 12 195 -6347 216 0 0 0 chr5 103576059 103576083 -99509449 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 983 223 54 4 chr5 103576226 103576504 -99509028 + L1M4 LINE L1 4594 4885 -1759 3212 156 18 30 chr5 103576504 103577591 -99507941 + L1M1 LINE L1 4623 5695 -610 22 0 0 0 chr5 103579162 103579184 -99506348 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr5 103580539 103580564 -99504968 + (A)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr5 103581286 103581306 -99504226 + (T)n Simple_repeat Simple_repeat 1 20 0 2317 81 14 0 chr5 103581678 103581974 -99503558 - AluSg SINE Alu -10 300 1 2213 72 24 10 chr5 103582005 103582295 -99503237 + AluY SINE Alu 1 294 -17 189 0 0 0 chr5 103582532 103582553 -99502979 + (CAA)n Simple_repeat Simple_repeat 2 22 0 272 235 148 17 chr5 103583162 103583277 -99502255 - MIR3 SINE MIR -6 202 73 618 337 21 11 chr5 103583992 103584182 -99501350 - L3 LINE CR1 -2 1575 1384 200 133 0 0 chr5 103585547 103585577 -99499955 - MIR3 SINE MIR -29 179 150 23 0 0 0 chr5 103587459 103587482 -99498050 + AT_rich Low_complexity Low_complexity 1 23 0 454 237 40 24 chr5 103588246 103588414 -99497118 - HsTC2 DNA Tc2 -7 1891 4 3195 166 0 4 chr5 103588530 103589043 -99496489 - MER44D DNA MER2_type -39 566 1 515 232 71 35 chr5 103590379 103590577 -99494955 + MLT1K LTR MaLR 379 583 -5 21 0 0 0 chr5 103591192 103591213 -99494319 + AT_rich Low_complexity Low_complexity 1 21 0 203 147 0 0 chr5 103592943 103592977 -99492555 + (TC)n Simple_repeat Simple_repeat 1 34 0 187 231 0 39 chr5 103593185 103593237 -99492295 + L2 LINE L2 3263 3312 -1 2122 134 22 67 chr5 103594985 103595389 -99490143 + MLT1B LTR MaLR 1 386 -4 522 226 24 91 chr5 103596914 103597036 -99488496 - L1ME LINE L1 -346 5775 5677 2190 129 0 0 chr5 103597036 103597345 -99488187 - AluSc SINE Alu 0 309 1 522 226 24 91 chr5 103597345 103597474 -99488058 - L1ME LINE L1 -444 5677 5541 1614 82 19 0 chr5 103598697 103598903 -99486629 - AluSx SINE Alu -102 210 1 5564 184 44 31 chr5 103600616 103602791 -99482741 + L1MB4 LINE L1 3952 6155 -25 616 98 0 0 chr5 103602930 103603012 -99482520 - AluSc SINE Alu -227 82 1 186 43 0 0 chr5 103603089 103603112 -99482420 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 505 308 101 42 chr5 103603113 103603519 -99482013 + L1M4 LINE L1 3059 3488 -2658 577 289 100 13 chr5 103603547 103603848 -99481684 + L1MEd LINE L1 58 384 -5735 343 313 56 34 chr5 103606458 103606637 -99478895 + L2 LINE L2 1819 2001 -1313 256 297 14 0 chr5 103606647 103606721 -99478811 + L2 LINE L2 2221 2295 -1019 2429 84 0 0 chr5 103607279 103607589 -99477943 + AluSg SINE Alu 1 310 0 21 0 0 0 chr5 103610378 103610399 -99475133 + AT_rich Low_complexity Low_complexity 1 21 0 2484 149 39 56 chr5 103611719 103612255 -99473277 - Tigger6 DNA MER2_type 0 1597 1071 1832 188 144 3 chr5 103612234 103612617 -99472915 - Tigger6b DNA MER2_type -1153 444 8 * 454 211 64 0 chr5 103612618 103612727 -99472805 - MIR SINE MIR -15 247 132 324 297 59 34 chr5 103613142 103613260 -99472272 + L2 LINE L2 3193 3313 0 1420 193 20 30 chr5 103613654 103613949 -99471583 - AluJb SINE Alu -20 292 1 22 0 0 0 chr5 103614741 103614763 -99470769 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 103615541 103615570 -99469962 + AT_rich Low_complexity Low_complexity 1 29 0 217 227 0 0 chr5 103617345 103617389 -99468143 - L2 LINE L2 -100 3213 3170 453 282 40 52 chr5 103617390 103617564 -99467968 + L2 LINE L2 3142 3313 0 28 48 0 0 chr5 103618349 103618391 -99467141 + AT_rich Low_complexity Low_complexity 1 42 0 2495 226 74 9 chr5 103618509 103619475 -99466057 + L1PB1 LINE L1 6 1045 -5818 14448 212 10 7 chr5 103619480 103624189 -99461343 + L1PB1 LINE L1 1094 6021 -841 42962 49 4 0 chr5 103624194 103630323 -99455209 + L1PA4 LINE L1 1 6152 -3 5450 104 18 26 chr5 103630313 103630836 -99454696 + L1PB1 LINE L1 6016 6531 -336 * 2479 77 0 0 chr5 103630836 103631147 -99454385 + AluY SINE Alu 1 311 0 5450 104 18 26 chr5 103631147 103631481 -99454051 + L1PB1 LINE L1 6531 6866 -1 435 170 0 43 chr5 103631588 103631729 -99453803 + (TA)n Simple_repeat Simple_repeat 1 135 0 1412 191 16 27 chr5 103631751 103632008 -99453524 - AluJo SINE Alu -58 254 1 25 75 0 0 chr5 103632134 103632187 -99453345 + AT_rich Low_complexity Low_complexity 1 53 0 412 202 24 12 chr5 103632857 103632941 -99452591 + L2 LINE L2 3229 3313 0 12339 23 0 0 chr5 103633366 103635591 -99449941 + L1PA3 LINE L1 3925 6152 -3 1742 192 85 6 chr5 103635626 103635990 -99449542 - MLT1F1 LTR MaLR 0 567 175 2706 244 49 20 chr5 103636004 103636702 -99448830 + ERVL LTR ERVL 4578 5295 -469 3314 150 61 21 chr5 103636702 103636902 -99448630 + Tigger1 DNA MER2_type 2 192 -2226 1353 211 3 57 chr5 103636902 103637200 -99448332 - AluJo SINE Alu -30 282 1 3314 150 61 21 chr5 103637200 103637618 -99447914 + Tigger1 DNA MER2_type 192 645 -1773 2787 190 50 2 chr5 103637597 103638114 -99447418 - MER82 DNA MER2_type -111 542 1 * 234 276 0 0 chr5 103638137 103638195 -99447337 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 289 163 0 0 chr5 103638200 103638249 -99447283 + MLT2F LTR ERVL 613 661 -2 2237 106 0 0 chr5 103639620 103639921 -99445611 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr5 103640166 103640194 -99445338 + AT_rich Low_complexity Low_complexity 1 28 0 1778 24 0 0 chr5 103640239 103640446 -99445086 + L1PA3 LINE L1 5949 6155 0 210 91 0 0 chr5 103640659 103640692 -99444840 + (CA)n Simple_repeat Simple_repeat 2 34 0 369 0 0 0 chr5 103642214 103642255 -99443277 + (TG)n Simple_repeat Simple_repeat 1 41 0 30 59 0 0 chr5 103643090 103643141 -99442391 + AT_rich Low_complexity Low_complexity 1 51 0 192 152 0 0 chr5 103643635 103643668 -99441864 + CT-rich Low_complexity Low_complexity 1 33 0 * 216 67 0 0 chr5 103643665 103643695 -99441837 + (TCCCC)n Simple_repeat Simple_repeat 2 31 0 1897 138 24 3 chr5 103643699 103643996 -99441536 - AluSq SINE Alu -10 303 1 5007 112 22 30 chr5 103644156 103644958 -99440574 - L1PB4 LINE L1 -1 6155 5360 268 261 54 75 chr5 103645360 103645567 -99439965 - MIR SINE MIR 0 262 62 486 333 111 5 chr5 103645758 103645956 -99439576 - MIR SINE MIR 0 262 44 24 0 0 0 chr5 103646034 103646058 -99439474 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 103646221 103646242 -99439290 + AT_rich Low_complexity Low_complexity 1 21 0 291 276 72 66 chr5 103650620 103650772 -99434760 - MIR SINE MIR -65 197 45 629 275 59 31 chr5 103653178 103653400 -99432132 + MIR SINE MIR 8 235 -27 187 273 30 0 chr5 103654033 103654099 -99431433 + MIR SINE MIR 138 205 -57 2567 35 3 58 chr5 103655654 103656000 -99429532 + L1PA3 LINE L1 5829 6155 0 346 263 46 106 chr5 103656033 103656206 -99429326 - MIR SINE MIR -44 218 59 1556 196 0 42 chr5 103656206 103656512 -99429020 - AluJo SINE Alu -11 301 9 346 263 46 106 chr5 103656512 103656555 -99428977 - MIR SINE MIR -203 59 15 355 250 93 9 chr5 103656631 103656739 -99428793 + L2 LINE L2 3196 3312 -1 1254 251 134 8 chr5 103656829 103657224 -99428308 - LTR16A LTR ERVL -5 445 1 4925 126 26 5 chr5 103657269 103658540 -99426992 - L1PBa LINE L1 -4789 2074 634 1184 133 10 0 chr5 103658540 103658736 -99426796 - L1PBa LINE L1 -6663 200 3 293 288 199 0 chr5 103661858 103662004 -99423528 - MIR3 SINE MIR -4 204 30 22 0 0 0 chr5 103663410 103663432 -99422100 + AT_rich Low_complexity Low_complexity 1 22 0 429 20 0 0 chr5 103663640 103663690 -99421842 + (CA)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr5 103664788 103664816 -99420716 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr5 103665370 103665409 -99420123 + AT_rich Low_complexity Low_complexity 1 39 0 1493 62 31 31 chr5 103666759 103666983 -99418549 + L1PA13 LINE L1 5940 6163 0 22 80 0 0 chr5 103669602 103669652 -99415880 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr5 103672060 103672091 -99413441 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 103672312 103672340 -99413192 + AT_rich Low_complexity Low_complexity 1 28 0 734 132 8 23 chr5 103672529 103672658 -99412874 + L1PA15 LINE L1 6034 6160 -5 208 314 116 16 chr5 103673502 103673623 -99411909 + MIR SINE MIR 41 173 -89 1537 199 10 26 chr5 103673663 103673965 -99411567 - AluJb SINE Alu -14 298 2 1198 170 4 94 chr5 103674031 103674296 -99411236 + MIR SINE MIR 1 241 -21 496 252 63 0 chr5 103674926 103675037 -99410495 + MIR SINE MIR 114 231 -31 1046 224 41 37 chr5 103676151 103676419 -99409113 + MLT1A2 LTR MaLR 87 355 -19 2128 184 29 2 chr5 103676419 103676831 -99408701 + MLT1A2-int LTR MaLR 238 660 -1075 784 241 9 11 chr5 103676885 103677077 -99408455 + MLT1A2 LTR MaLR 193 374 0 1783 146 7 17 chr5 103678094 103678388 -99407144 - AluJo SINE Alu -8 304 14 3880 203 58 36 chr5 103680088 103680337 -99405195 + L1MB7 LINE L1 4020 4262 -1965 273 29 0 0 chr5 103680337 103680371 -99405161 + (CA)n Simple_repeat Simple_repeat 2 35 0 3880 203 58 36 chr5 103680371 103681512 -99404020 + L1MB7 LINE L1 4262 5550 -677 762 198 6 17 chr5 103681512 103681684 -99403848 + L1MB7 LINE L1 6002 6171 -13 3880 203 58 36 chr5 103681684 103681742 -99403790 + L1MB7 LINE L1 5550 5605 -622 2597 27 3 0 chr5 103682163 103682463 -99403069 + AluY SINE Alu 1 301 -10 225 65 0 0 chr5 103684562 103684593 -99400939 + (TG)n Simple_repeat Simple_repeat 2 32 0 185 172 16 0 chr5 103685857 103685921 -99399611 + (TA)n Simple_repeat Simple_repeat 2 66 0 24 32 0 0 chr5 103686013 103686044 -99399488 + AT_rich Low_complexity Low_complexity 1 31 0 581 79 0 0 chr5 103686841 103686917 -99398615 - AluSc SINE Alu -201 108 33 1770 173 3 3 chr5 103687272 103687573 -99397959 + AluJo SINE Alu 2 302 -10 22 0 0 0 chr5 103688177 103688199 -99397333 + AT_rich Low_complexity Low_complexity 1 22 0 462 315 28 14 chr5 103688239 103688382 -99397150 + MIR SINE MIR 7 151 -111 298 258 54 11 chr5 103688728 103688821 -99396711 - MIR SINE MIR 0 262 166 845 192 80 112 chr5 103688830 103689231 -99396301 + LTR7 LTR ERV1 63 450 0 5583 204 61 21 chr5 103689731 103691082 -99394450 + Charlie1a DNA MER1_type 1 1405 -50 2269 92 3 0 chr5 103691176 103691479 -99394053 - AluSx SINE Alu -6 306 3 302 343 135 6 chr5 103691500 103691678 -99393854 - MIR SINE MIR -59 203 3 2407 82 0 0 chr5 103691869 103692173 -99393359 + AluY SINE Alu 1 304 -7 1050 160 0 0 chr5 103692379 103692535 -99392997 + FRAM SINE Alu 1 156 -20 903 119 36 6 chr5 103692542 103692710 -99392822 + GA-rich Low_complexity Low_complexity 1 173 0 436 181 24 0 chr5 103693415 103693498 -99392034 + MER21B LTR ERV1 12 96 -767 628 205 39 43 chr5 103693541 103693789 -99391743 + MER21B LTR ERV1 98 445 -418 1699 113 17 0 chr5 103694047 103694285 -99391247 + AluSc SINE Alu 44 285 -24 33 25 0 0 chr5 103694285 103694325 -99391207 + AT_rich Low_complexity Low_complexity 1 40 0 8149 125 18 1 chr5 103694768 103696046 -99389486 - HSMAR2 DNA Mariner -1 1301 2 32 43 0 0 chr5 103696152 103696198 -99389334 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 103696661 103696683 -99388849 + AT_rich Low_complexity Low_complexity 1 22 0 367 330 101 77 chr5 103696695 103696922 -99388610 + L2 LINE L2 2199 2419 -895 8898 26 6 1 chr5 103696922 103698758 -99386774 - L1PA4 LINE L1 0 6155 4317 367 330 101 77 chr5 103698758 103699103 -99386429 + L2 LINE L2 2419 2785 -529 2055 138 0 0 chr5 103699110 103699406 -99386126 - AluSx SINE Alu -16 296 1 192 321 71 12 chr5 103699440 103699524 -99386008 + L2 LINE L2 2769 2857 -457 268 348 60 53 chr5 103699635 103699917 -99385615 + L2 LINE L2 2916 3199 -73 251 266 101 47 chr5 103700156 103700325 -99385207 + L1ME3A LINE L1 5962 6139 -31 330 312 80 8 chr5 103700333 103700458 -99385074 + MER94 DNA DNA 1 134 0 213 154 0 0 chr5 103700591 103700630 -99384902 + (TA)n Simple_repeat Simple_repeat 1 39 0 242 109 0 0 chr5 103700636 103700682 -99384850 + LTR66 LTR ERVL 394 439 -171 230 138 0 69 chr5 103700683 103700741 -99384791 - L1MC4 LINE L1 -1350 6692 6639 21 36 0 0 chr5 103701291 103701319 -99384213 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 103702091 103702122 -99383410 + AT_rich Low_complexity Low_complexity 1 31 0 306 50 0 0 chr5 103704625 103704665 -99380867 + (CA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 103705899 103705920 -99379612 + AT_rich Low_complexity Low_complexity 1 21 0 267 43 0 0 chr5 103709347 103709393 -99376139 + LTR66 LTR ERVL 394 439 -171 237 111 0 0 chr5 103709363 103709408 -99376124 - LTR66 LTR ERVL -171 439 395 * 3502 125 29 2 chr5 103709758 103710271 -99375261 - MER1A DNA MER1_type 0 527 1 181 316 0 13 chr5 103710272 103710351 -99375181 + L2 LINE L2 2662 2739 -575 858 285 76 13 chr5 103711550 103711908 -99373624 + LTR16A LTR ERVL 16 444 -6 484 257 80 11 chr5 103712375 103712550 -99372982 + L1ME LINE L1 5628 5814 -307 1331 173 9 0 chr5 103712882 103713113 -99372419 - L1PA16 LINE L1 -9 6157 5925 2375 58 7 0 chr5 103715078 103715373 -99370159 - AluY SINE Alu -14 297 1 311 197 26 0 chr5 103715840 103715916 -99369616 + MER116 DNA Mariner 1 78 -2 11512 179 28 23 chr5 103716025 103719287 -99366245 - L1PA15 LINE L1 -6 6159 2912 500 299 109 40 chr5 103719431 103719752 -99365780 + L2 LINE L2 2310 2652 -662 278 301 220 16 chr5 103719719 103719905 -99365627 - MIR SINE MIR -36 226 3 * 962 174 5 64 chr5 103720238 103720456 -99365076 - MER2 DNA MER2_type 0 345 141 1739 279 92 51 chr5 103720671 103721655 -99363877 + HAL1 LINE L1 4 1028 -1479 1396 129 0 52 chr5 103721655 103721887 -99363645 - AluJb SINE Alu -8 304 85 1494 258 123 30 chr5 103721890 103722400 -99363132 + HAL1 LINE L1 1022 1626 -881 1852 173 10 0 chr5 103722400 103722706 -99362826 + AluSx SINE Alu 1 309 -3 1494 258 123 30 chr5 103722706 103722950 -99362582 + HAL1 LINE L1 1626 1846 -661 313 159 130 0 chr5 103723541 103723610 -99361922 - MLT1D LTR MaLR -427 78 1 389 292 0 0 chr5 103723614 103723703 -99361829 + HERV16 LTR ERVL 1016 1104 -3892 339 44 0 0 chr5 103724238 103724283 -99361249 + (CA)n Simple_repeat Simple_repeat 2 46 0 1864 156 10 3 chr5 103724459 103724767 -99360765 + AluJo SINE Alu 1 310 -2 3598 138 29 0 chr5 103724928 103725506 -99360026 - Tigger1 DNA MER2_type -147 2271 1677 31 44 0 0 chr5 103725722 103725767 -99359765 + AT_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr5 103725792 103725822 -99359710 + AT_rich Low_complexity Low_complexity 1 30 0 511 315 59 39 chr5 103725865 103726119 -99359413 - MIR SINE MIR -1 261 3 2332 98 0 7 chr5 103726342 103726647 -99358885 + AluSc SINE Alu 2 304 -5 22 0 0 0 chr5 103727831 103727853 -99357679 + AT_rich Low_complexity Low_complexity 1 22 0 553 344 5 0 chr5 103728307 103728493 -99357039 - MIR SINE MIR 0 262 76 23 33 0 0 chr5 103729622 103729652 -99355880 + AT_rich Low_complexity Low_complexity 1 30 0 194 180 40 40 chr5 103729708 103729758 -99355774 - MIR SINE MIR -66 142 93 41835 37 1 51 chr5 103729860 103736342 -99349190 - L1PA3 LINE L1 -3 6152 3 2772 177 6 4 chr5 103736403 103736873 -99348659 - MER68 LTR ERV1 -70 492 22 243 246 45 80 chr5 103737430 103737629 -99347903 + L1M4 LINE L1 4780 4971 -1175 489 316 92 3 chr5 103737679 103737983 -99347549 + L1ME LINE L1 4891 5221 -925 678 294 90 22 chr5 103737992 103738359 -99347173 + L1ME LINE L1 5265 5656 -506 231 36 0 0 chr5 103738483 103738511 -99347021 + (T)n Simple_repeat Simple_repeat 1 28 0 252 59 0 0 chr5 103739798 103739832 -99345700 + (TG)n Simple_repeat Simple_repeat 2 35 0 1159 196 52 62 chr5 103740457 103740748 -99344784 - AluJo SINE Alu -11 291 4 38 22 0 0 chr5 103741007 103741052 -99344480 + AT_rich Low_complexity Low_complexity 1 45 0 239 178 44 0 chr5 103741180 103741225 -99344307 - L2 LINE L2 -6 3307 3261 2285 65 10 0 chr5 103742271 103742562 -99342970 - AluY SINE Alu -17 294 1 489 191 52 9 chr5 103743189 103743304 -99342228 - MER104 DNA Tc2 -55 125 6 186 191 0 0 chr5 103743608 103743655 -99341877 + (CA)n Simple_repeat Simple_repeat 2 48 0 812 244 13 63 chr5 103743709 103743947 -99341585 - MER8 DNA MER2_type -13 226 1 23 0 0 0 chr5 103747238 103747261 -99338271 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr5 103748650 103748700 -99336832 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr5 103748732 103748763 -99336769 + AT_rich Low_complexity Low_complexity 1 31 0 1937 122 58 61 chr5 103749078 103749440 -99336092 + MER46B DNA MER2_type 1 236 0 21 36 0 0 chr5 103750460 103750488 -99335044 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 103751114 103751140 -99334392 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 450 307 231 5 chr5 103751657 103751869 -99333663 - MIR SINE MIR 0 262 3 2250 93 0 10 chr5 103753172 103753474 -99332058 + AluSg SINE Alu 1 299 -11 315 0 0 0 chr5 103756551 103756586 -99328946 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 103758757 103758779 -99326753 + AT_rich Low_complexity Low_complexity 1 22 0 361 272 212 22 chr5 103759328 103759373 -99326159 - MIR SINE MIR -28 234 199 523 192 32 88 chr5 103759373 103759498 -99326034 - FLAM_A SINE Alu -15 118 1 361 272 212 22 chr5 103759498 103759616 -99325916 - MIR SINE MIR -63 199 30 2179 96 3 3 chr5 103759616 103759909 -99325623 - AluSx SINE Alu -19 293 1 361 272 212 22 chr5 103759909 103759928 -99325604 - MIR SINE MIR -232 30 16 439 149 160 0 chr5 103762673 103762767 -99322765 - L2 LINE L2 -10 3303 3195 249 229 14 0 chr5 103762998 103763068 -99322464 + (TA)n Simple_repeat Simple_repeat 2 72 0 298 244 118 59 chr5 103763283 103763402 -99322130 + MIR SINE MIR 66 191 -71 203 314 0 0 chr5 103763852 103763922 -99321610 + A-rich Low_complexity Low_complexity 5 74 0 21 0 0 0 chr5 103764534 103764555 -99320977 + AT_rich Low_complexity Low_complexity 1 21 0 546 57 0 0 chr5 103768274 103768344 -99317188 + (CA)n Simple_repeat Simple_repeat 2 71 0 22 56 0 0 chr5 103769141 103769177 -99316355 + AT_rich Low_complexity Low_complexity 1 36 0 227 200 0 18 chr5 103771634 103771689 -99313843 + A-rich Low_complexity Low_complexity 2 55 0 285 189 0 0 chr5 103773286 103773339 -99312193 - L2 LINE L2 -5 3267 3215 21 0 0 0 chr5 103773988 103774009 -99311523 + AT_rich Low_complexity Low_complexity 1 21 0 343 102 0 0 chr5 103776132 103776181 -99309351 + AluYb8 SINE Alu 86 134 -174 859 20 0 0 chr5 103776181 103776279 -99309253 + AluY SINE Alu 202 299 -12 2425 76 3 20 chr5 103777986 103778329 -99307203 - L1PB1 LINE L1 -8 6143 5807 1049 278 131 20 chr5 103778343 103778839 -99306693 - MLT1L LTR MaLR -56 559 9 413 312 58 25 chr5 103778849 103779176 -99306356 - L1M4 LINE L1 -1439 4707 4370 1240 119 0 0 chr5 103779199 103779376 -99306156 - AluSc SINE Alu -14 295 119 7193 55 0 0 chr5 103779405 103780324 -99305208 - L1PA7 LINE L1 0 6154 5236 240 400 67 7 chr5 103780354 103780489 -99305043 + L2 LINE L2 3125 3267 -5 455 235 10 20 chr5 103780951 103781053 -99304479 + MER63 DNA MER1_type 960 1060 0 1610 204 33 28 chr5 103781206 103781599 -99303933 + L1ME3A LINE L1 5773 6167 -3 2176 116 7 0 chr5 103781733 103782034 -99303498 - AluSq SINE Alu -8 305 3 2616 71 6 0 chr5 103782046 103782398 -99303134 + L1PA8 LINE L1 5817 6170 -2 29 28 0 0 chr5 103782486 103782522 -99303010 + AT_rich Low_complexity Low_complexity 1 36 0 243 241 17 17 chr5 103785347 103785405 -99300127 + CT-rich Low_complexity Low_complexity 3 60 0 2359 63 7 17 chr5 103786787 103787089 -99298443 + AluSp SINE Alu 1 299 -14 1013 235 25 5 chr5 103787505 103787709 -99297823 + Tigger7 DNA MER2_type 2 209 -524 1508 194 47 0 chr5 103789402 103789680 -99295852 - AluJo SINE Alu -21 291 1 3965 143 38 27 chr5 103789801 103790509 -99295023 - Tigger2 DNA MER2_type 0 2718 2003 537 212 0 0 chr5 103790520 103790638 -99294894 + CT-rich Low_complexity Low_complexity 1 118 0 1259 98 0 35 chr5 103790658 103790832 -99294700 - AluSq SINE Alu -144 169 2 13086 120 19 10 chr5 103790832 103792823 -99292709 - Tigger2 DNA MER2_type -707 2011 4 325 343 36 0 chr5 103792866 103793003 -99292529 + MIR SINE MIR 104 245 -17 27 0 0 0 chr5 103793871 103793898 -99291634 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr5 103793966 103793993 -99291539 + AT_rich Low_complexity Low_complexity 1 27 0 434 227 173 27 chr5 103794103 103794253 -99291279 - MER5B DNA MER1_type -6 172 1 558 225 0 47 chr5 103794253 103794382 -99291150 + MER5B DNA MER1_type 56 178 0 2129 108 41 0 chr5 103794498 103794793 -99290739 + AluSx SINE Alu 1 307 -5 1541 192 7 7 chr5 103795327 103795624 -99289908 - AluJo SINE Alu -15 297 1 461 292 69 13 chr5 103795780 103795971 -99289561 + MIR SINE MIR 15 211 -51 338 246 181 76 chr5 103796008 103796179 -99289353 + MIR SINE MIR 12 200 -62 2190 86 0 36 chr5 103797014 103797315 -99288217 + AluSc SINE Alu 1 290 -19 1801 176 33 24 chr5 103797380 103797709 -99287823 + MER2 DNA MER2_type 1 332 -13 26 30 0 0 chr5 103800633 103800666 -99284866 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr5 103802354 103802379 -99283153 + AT_rich Low_complexity Low_complexity 1 25 0 211 229 1 36 chr5 103802391 103802473 -99283059 + A-rich Low_complexity Low_complexity 1 60 0 591 299 139 19 chr5 103802653 103803027 -99282505 - L1MC/D LINE L1 -1984 5824 5406 23 0 0 0 chr5 103803912 103803935 -99281597 + AT_rich Low_complexity Low_complexity 1 23 0 1325 201 77 4 chr5 103804007 103804281 -99281251 + AluJo SINE Alu 1 294 -18 251 178 0 41 chr5 103804281 103804354 -99281178 + G-rich Low_complexity Low_complexity 4 73 0 192 212 0 35 chr5 103804341 103804426 -99281106 + GA-rich Low_complexity Low_complexity 1 82 0 * 336 271 35 83 chr5 103804515 103804744 -99280788 + HAL1 LINE L1 164 381 -2126 1811 113 106 4 chr5 103804853 103805128 -99280404 + AluSx SINE Alu 1 303 -9 1321 246 130 62 chr5 103805243 103806271 -99279261 + HAL1 LINE L1 1072 2169 -338 326 323 62 47 chr5 103806285 103806477 -99279055 + HAL1 LINE L1 2297 2491 -16 276 224 114 55 chr5 103806569 103806770 -99278762 - L1MEd LINE L1 -4917 1202 990 277 324 173 7 chr5 103806784 103806923 -99278609 - L1MEd LINE L1 -5372 747 586 657 198 6 110 chr5 103807118 103807204 -99278328 - FRAM SINE Alu -149 163 70 198 0 0 0 chr5 103807204 103807226 -99278306 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7483 22 8 0 chr5 103807226 103808471 -99277061 - L1PA3 LINE L1 -18 6137 4885 657 198 6 110 chr5 103808471 103808565 -99276967 - FRAM SINE Alu -240 72 1 566 110 33 0 chr5 103808851 103808942 -99276590 - L1MA3 LINE L1 -1 6304 6211 2082 67 0 0 chr5 103808991 103809246 -99276286 + AluSc SINE Alu 19 273 -36 279 54 0 0 chr5 103809248 103809285 -99276247 + (TAA)n Simple_repeat Simple_repeat 1 37 0 4426 104 13 87 chr5 103809286 103809637 -99275895 - L1MA3 LINE L1 -87 6218 5868 3340 200 12 43 chr5 103809637 103810104 -99275428 - L1PA11 LINE L1 -250 5924 5444 1759 123 0 0 chr5 103810104 103810355 -99275177 + AluSx SINE Alu 51 301 -11 2129 123 3 3 chr5 103810357 103810667 -99274865 + AluSg SINE Alu 1 310 0 3340 200 12 43 chr5 103810667 103811451 -99274081 - L1PA11 LINE L1 -731 5443 4719 583 99 33 0 chr5 103811458 103811549 -99273983 + L1MA3 LINE L1 6211 6304 -1 1177 153 0 0 chr5 103811812 103812015 -99273517 + L1 LINE L1 4532 4734 -1412 * 17551 142 40 8 chr5 103812010 103814367 -99271165 - L1M1 LINE L1 -4570 2995 528 356 0 23 0 chr5 103814367 103814411 -99271121 + (CACAG)n Simple_repeat Simple_repeat 4 48 0 17551 142 40 8 chr5 103814411 103814945 -99270587 - L1M1 LINE L1 -7037 528 12 30 0 0 0 chr5 103818666 103818696 -99266836 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 103818864 103818894 -99266638 + AT_rich Low_complexity Low_complexity 1 30 0 614 269 50 0 chr5 103818949 103819131 -99266401 - MIR SINE MIR 0 262 72 279 0 0 0 chr5 103819841 103819872 -99265660 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 687 271 14 66 chr5 103819991 103820279 -99265253 + L2 LINE L2 3023 3295 -18 1506 160 8 0 chr5 103821153 103821390 -99264142 + AluJb SINE Alu 57 295 -17 274 330 0 11 chr5 103823061 103823149 -99262383 + L2 LINE L2 3227 3313 0 204 250 83 14 chr5 103823419 103823491 -99262041 - MIR3 SINE MIR -2 206 130 22 0 0 0 chr5 103823830 103823852 -99261680 + AT_rich Low_complexity Low_complexity 1 22 0 1657 258 156 9 chr5 103824704 103825250 -99260282 + MLT1E2 LTR MaLR 1 626 0 247 197 16 0 chr5 103826045 103826106 -99259426 + L1MCa LINE L1 72 133 -6293 3582 205 99 59 chr5 103826991 103829051 -99256481 + L1MCa LINE L1 21 2175 -4251 197 162 27 0 chr5 103829429 103829466 -99256066 - MIR SINE MIR -11 251 214 21 82 0 0 chr5 103830168 103830217 -99255315 + AT_rich Low_complexity Low_complexity 1 49 0 1973 81 0 8 chr5 103830696 103830954 -99254578 - AluY SINE Alu -17 294 39 470 156 0 0 chr5 103831054 103831173 -99254359 + AluSp/q SINE Alu 217 313 0 11726 210 39 42 chr5 103831824 103832347 -99253185 + L1PA16 LINE L1 781 1304 -4919 869 158 0 0 chr5 103832347 103832480 -99253052 + FLAM_C SINE Alu 1 133 0 11726 210 39 42 chr5 103832480 103832501 -99253031 + L1PA16 LINE L1 1304 1324 -4899 1552 186 6 35 chr5 103832501 103832813 -99252719 - AluJo SINE Alu -9 303 1 11726 210 39 42 chr5 103832813 103834586 -99250946 + L1PA16 LINE L1 1324 3101 -3122 2220 100 0 10 chr5 103834586 103834895 -99250637 + AluY SINE Alu 1 306 -5 11726 210 39 42 chr5 103834895 103835990 -99249542 + L1PA16 LINE L1 3101 4198 -2025 1259 158 138 60 chr5 103835990 103836338 -99249194 + THE1C LTR MaLR 1 375 0 11726 210 39 42 chr5 103836338 103836859 -99248673 + L1PA16 LINE L1 4198 4719 -1504 192 40 0 0 chr5 103836859 103836884 -99248648 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 11726 210 39 42 chr5 103836884 103838346 -99247186 + L1PA16 LINE L1 4719 6223 0 1663 164 35 9 chr5 103838384 103838702 -99246830 + L1MA4A LINE L1 5969 6294 -9 799 277 113 30 chr5 103839755 103840444 -99245088 - L1MEd LINE L1 -4734 1576 785 1916 148 3 10 chr5 103840624 103840921 -99244611 - AluJb SINE Alu -15 297 3 43 20 0 0 chr5 103841182 103841232 -99244300 + AT_rich Low_complexity Low_complexity 1 50 0 227 208 19 0 chr5 103841854 103841907 -99243625 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 3253 204 159 45 chr5 103841959 103842081 -99243451 + L1MC4 LINE L1 6675 6782 -1260 1735 182 16 58 chr5 103842081 103842331 -99243201 - MER7A DNA MER2_type -2692 346 116 1859 138 0 7 chr5 103842331 103842607 -99242925 + AluSx SINE Alu 5 278 -34 1735 182 16 58 chr5 103842607 103842719 -99242813 - MER7A DNA MER2_type -2922 116 1 540 0 0 0 chr5 103842726 103842786 -99242746 + (TG)n Simple_repeat Simple_repeat 2 61 0 3253 204 159 45 chr5 103842786 103843756 -99241776 + L1MC4 LINE L1 6787 7900 -142 297 0 0 0 chr5 103844522 103844555 -99240977 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1077 113 0 7 chr5 103845569 103845720 -99239812 - AluSx SINE Alu -116 196 47 2369 69 3 0 chr5 103845720 103846025 -99239507 - MER41A LTR ERV1 -248 306 1 7074 89 28 3 chr5 103846025 103847010 -99238522 - MER41A-int LTR ERV1 -2 5944 4935 320 62 0 0 chr5 103847110 103847158 -99238374 + AluSx SINE Alu 253 300 -1 1970 92 0 0 chr5 103847175 103847437 -99238095 + MER41A LTR ERV1 293 554 0 251 333 18 0 chr5 103847992 103848103 -99237429 - L2 LINE L2 -215 3057 2945 1627 149 125 146 chr5 103848194 103848818 -99236714 + LTR36 LTR ERV1 1 611 0 2119 114 0 3 chr5 103849231 103849528 -99236004 + AluSx SINE Alu 1 296 -16 272 83 0 0 chr5 103849628 103849664 -99235868 + L1MB1 LINE L1 6130 6165 -3 222 208 0 0 chr5 103850047 103850100 -99235432 + (CATA)n Simple_repeat Simple_repeat 2 54 0 329 231 187 8 chr5 103850769 103850903 -99234629 - L2 LINE L2 -6 3307 3150 318 203 17 0 chr5 103853171 103853230 -99232302 - Tigger2 DNA MER2_type -2657 61 2 3022 156 6 4 chr5 103853233 103853739 -99231793 - L1MB1 LINE L1 -140 6028 5522 44 35 0 0 chr5 103853924 103853982 -99231550 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr5 103854541 103854564 -99230968 + AT_rich Low_complexity Low_complexity 1 23 0 2586 287 81 29 chr5 103855291 103857069 -99228463 - L1MEc LINE L1 -4269 2127 71 243 0 0 0 chr5 103857133 103857160 -99228372 + (T)n Simple_repeat Simple_repeat 1 27 0 1230 86 2 295 chr5 103857971 103858391 -99227141 + AluSx SINE Alu 1 297 -5 1859 175 0 0 chr5 103858496 103858787 -99226745 - AluJo SINE Alu -13 299 9 2185 103 0 0 chr5 103858808 103859099 -99226433 - AluSg SINE Alu -10 300 10 1943 136 7 10 chr5 103860367 103860676 -99224856 - AluSx SINE Alu -4 308 1 25 51 0 0 chr5 103860862 103860901 -99224631 + AT_rich Low_complexity Low_complexity 1 39 0 387 0 0 0 chr5 103861628 103861671 -99223861 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 180 0 0 0 chr5 103861842 103861862 -99223670 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 203 364 213 22 chr5 103862662 103862887 -99222645 + L2 LINE L2 3004 3271 -1 526 190 91 156 chr5 103862990 103863395 -99222137 - L1MC4a LINE L1 -1672 6136 5758 249 33 0 0 chr5 103863441 103863471 -99222061 + (TCTCCC)n Simple_repeat Simple_repeat 4 33 0 6015 79 21 34 chr5 103863480 103865120 -99220412 + SVA Other Other 1 1385 -1 743 302 125 55 chr5 103865901 103866557 -99218975 + L2 LINE L2 2274 2975 -339 375 224 154 56 chr5 103866863 103867006 -99218526 - MIR SINE MIR -77 185 29 764 172 59 20 chr5 103867190 103867394 -99218138 - Charlie4 DNA MER1_type 0 1961 1750 599 196 98 12 chr5 103867384 103867547 -99217985 - Charlie4 DNA MER1_type -1728 233 57 * 6661 162 31 9 chr5 103867783 103869606 -99215926 - L1MC1 LINE L1 -17 6596 4736 6426 173 40 41 chr5 103869627 103870982 -99214550 - L1MC1 LINE L1 -5072 1354 1 3348 254 57 24 chr5 103871476 103872606 -99212926 + L1MD1 LINE L1 3989 5163 -983 2004 92 0 4 chr5 103872606 103872866 -99212666 + AluY SINE Alu 38 296 -15 3348 254 57 24 chr5 103872866 103872929 -99212603 + L1MD1 LINE L1 5163 5222 -924 2042 191 83 94 chr5 103872933 103873467 -99212065 + MER82 DNA MER2_type 1 528 -125 1882 145 10 19 chr5 103873467 103873778 -99211754 - AluSx SINE Alu -4 308 1 2042 191 83 94 chr5 103873778 103873872 -99211660 + MER82 DNA MER2_type 528 622 -31 4693 180 29 7 chr5 103873889 103874879 -99210653 + L1MD1 LINE L1 5225 6235 -7 812 226 48 71 chr5 103875671 103875763 -99209769 - LTR40a LTR ERVL -2 517 424 2239 117 0 7 chr5 103875763 103876062 -99209470 + AluSx SINE Alu 3 299 -13 812 226 48 71 chr5 103876062 103876221 -99209311 - LTR40a LTR ERVL -95 424 272 601 301 60 0 chr5 103876741 103876957 -99208575 + L2 LINE L2 1981 2209 -1105 * 684 220 14 83 chr5 103876950 103877168 -99208364 + L2 LINE L2 3111 3313 0 403 343 77 36 chr5 103877314 103877731 -99207801 - L2 LINE L2 -934 2380 1947 409 85 17 0 chr5 103877751 103877810 -99207722 + Alu SINE Alu 1 60 -242 379 236 34 11 chr5 103877910 103877999 -99207533 - MER5A DNA MER1_type -90 99 9 2004 258 45 36 chr5 103879128 103879966 -99205566 - L1M4 LINE L1 -2580 4268 3423 2143 97 35 0 chr5 103880977 103881266 -99204266 + AluY SINE Alu 1 299 -12 602 309 126 0 chr5 103881301 103881547 -99203985 + MLT1H LTR MaLR 203 479 -70 454 198 89 56 chr5 103881586 103881891 -99203641 - LTR45B LTR ERV1 0 595 305 2415 86 0 0 chr5 103882021 103882323 -99203209 - AluSg1 SINE Alu -7 302 1 6524 208 37 5 chr5 103882554 103885084 -99200448 + L1M3f LINE L1 7 2618 -3710 1876 303 58 47 chr5 103885101 103886031 -99199501 + MER21-int LTR ERV1 3526 4465 -2293 404 198 22 0 chr5 103886064 103886155 -99199377 - L1M4 LINE L1 -4312 2537 2445 693 260 53 0 chr5 103886290 103886459 -99199073 + MER21-int LTR ERV1 1669 1846 -2345 442 298 79 72 chr5 103886619 103886653 -99198879 + HERVL LTR ERVL 1871 1903 -3582 2635 104 0 0 chr5 103886653 103887008 -99198524 + THE1A LTR MaLR 1 355 0 442 298 79 72 chr5 103887008 103887309 -99198223 + HERVL LTR ERVL 1903 2703 -2782 1470 77 0 0 chr5 103887385 103887581 -99197951 - L1P LINE L1 -1574 4572 4377 * 3483 102 2 17 chr5 103887579 103888121 -99197411 + L1P LINE L1 4570 5103 -1043 2675 184 103 93 chr5 103888221 103888676 -99196856 - L1MC3 LINE L1 -136 7649 7108 237 189 54 68 chr5 103888676 103888750 -99196782 - MLT1F1 LTR MaLR -443 124 52 2675 184 103 93 chr5 103888750 103889087 -99196445 - L1MC3 LINE L1 -677 7108 6776 375 248 81 86 chr5 103889981 103890191 -99195341 - MIR SINE MIR -46 216 8 692 127 42 17 chr5 103890720 103890838 -99194694 + L1M3 LINE L1 5646 5766 -417 1093 254 58 31 chr5 103890838 103891236 -99194296 + MLT2B1 LTR ERVL 1 408 -56 1849 173 24 19 chr5 103891240 103891611 -99193921 + L1MB3 LINE L1 5810 6182 -1 1964 273 119 43 chr5 103891641 103892808 -99192724 + L1MD2 LINE L1 3 1081 -5315 1945 160 108 8 chr5 103892808 103893195 -99192337 + MSTB LTR MaLR 1 426 0 1964 273 119 43 chr5 103893195 103893378 -99192154 + L1MD2 LINE L1 1081 1249 -5147 2293 104 13 0 chr5 103893378 103893685 -99191847 + AluSx SINE Alu 1 311 -1 1964 273 119 43 chr5 103893685 103894060 -99191472 + L1MD2 LINE L1 1249 1859 -4537 4513 260 46 19 chr5 103894062 103894115 -99191417 + L1MD2 LINE L1 3363 3413 -2802 2144 106 20 0 chr5 103894115 103894407 -99191125 + AluSg SINE Alu 1 298 -12 4513 260 46 19 chr5 103894407 103894994 -99190538 + L1MD2 LINE L1 3413 3983 -2232 2422 77 0 0 chr5 103894994 103895291 -99190241 + AluY SINE Alu 1 297 -14 4513 260 46 19 chr5 103895291 103896309 -99189223 + L1MD2 LINE L1 3983 5066 -1149 14732 183 32 25 chr5 103896313 103899271 -99186261 + L1PB2 LINE L1 2 2939 -3946 1977 160 0 0 chr5 103899271 103899571 -99185961 + AluJb SINE Alu 3 302 -10 14732 183 32 25 chr5 103899571 103900460 -99185072 + L1PB2 LINE L1 2939 3821 -3064 396 0 0 0 chr5 103900460 103900504 -99185028 + (CA)n Simple_repeat Simple_repeat 1 44 0 14732 183 32 25 chr5 103900504 103902022 -99183510 + L1PB2 LINE L1 3821 5327 -1558 469 121 0 0 chr5 103902022 103902088 -99183444 + AluSq SINE Alu 1 66 -247 5134 97 58 7 chr5 103902088 103902830 -99182702 - LTR17 LTR ERV1 0 780 1 1479 93 0 93 chr5 103902830 103903078 -99182454 + AluSq SINE Alu 63 287 -26 459 0 0 0 chr5 103903078 103903129 -99182403 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 14732 183 32 25 chr5 103903129 103904450 -99181082 + L1PB2 LINE L1 5326 6761 -124 2320 120 29 31 chr5 103904149 103904567 -99180965 + L1MA4A LINE L1 6476 6892 -113 * 1204 296 14 0 chr5 103904684 103905049 -99180483 + L1ME1 LINE L1 5467 5836 -330 4011 198 64 26 chr5 103905052 103906167 -99179365 + L1MD2 LINE L1 5049 6218 -210 192 40 0 0 chr5 103906167 103906192 -99179340 + (CA)n Simple_repeat Simple_repeat 2 26 0 4011 198 64 26 chr5 103906192 103906308 -99179224 + L1MD2 LINE L1 6218 6328 -100 378 265 122 20 chr5 103907087 103907234 -99178298 - MIR SINE MIR -70 192 31 210 270 110 70 chr5 103907234 103907334 -99178198 - MIR SINE MIR -152 110 7 1108 268 54 14 chr5 103907505 103907915 -99177617 + L2 LINE L2 1613 2129 -1185 21 0 0 0 chr5 103908190 103908211 -99177321 + AT_rich Low_complexity Low_complexity 1 21 0 590 271 73 21 chr5 103909708 103909900 -99175632 + MIR SINE MIR 61 262 0 334 274 71 18 chr5 103910218 103910331 -99175201 - L2 LINE L2 -4 3309 3191 2243 105 0 0 chr5 103910908 103911204 -99174328 + AluSg SINE Alu 1 296 -14 329 331 63 14 chr5 103912566 103912708 -99172824 + MIR SINE MIR 32 180 -82 273 301 26 35 chr5 103913130 103913243 -99172289 - MIR SINE MIR -65 143 32 23 54 0 0 chr5 103913999 103914036 -99171496 + AT_rich Low_complexity Low_complexity 1 37 0 942 338 72 5 chr5 103914218 103914632 -99170900 + LTR16A LTR ERVL 9 450 0 3821 163 42 30 chr5 103914680 103915481 -99170051 + L1MB7 LINE L1 5244 6049 -135 991 266 65 93 chr5 103917134 103917720 -99167812 + L1ME3A LINE L1 3874 4408 -1738 2134 137 0 3 chr5 103917720 103918033 -99167499 + AluSq SINE Alu 1 312 -1 991 266 65 93 chr5 103918033 103918665 -99166867 + L1ME3A LINE L1 4408 5057 -1089 345 288 182 17 chr5 103918692 103918928 -99166604 + L1ME3A LINE L1 5427 5701 -469 1690 257 117 8 chr5 103918959 103919446 -99166086 - MLT1F LTR MaLR -2 540 1 347 248 67 67 chr5 103919448 103919658 -99165874 + L1ME3A LINE L1 5731 5940 -224 6367 127 38 78 chr5 103920008 103920286 -99165246 + Tigger3b DNA MER2_type 1 289 -2739 2187 108 0 0 chr5 103920286 103920582 -99164950 - AluSq SINE Alu -17 296 1 6367 127 38 78 chr5 103920582 103920995 -99164537 + Tigger3b DNA MER2_type 289 717 -2311 869 160 20 13 chr5 103920995 103921145 -99164387 + FRAM SINE Alu 5 155 -11 6367 127 38 78 chr5 103921145 103921733 -99163799 + Tigger3b DNA MER2_type 717 1229 -2 22 0 0 0 chr5 103922096 103922118 -99163414 + AT_rich Low_complexity Low_complexity 1 22 0 1690 171 33 13 chr5 103922128 103922433 -99163099 + AluJo SINE Alu 1 311 -1 432 0 0 0 chr5 103923769 103923817 -99161715 + (CA)n Simple_repeat Simple_repeat 2 49 0 5258 74 3 0 chr5 103924307 103925039 -99160493 - L1P LINE L1 -1600 4546 3813 21 36 0 0 chr5 103925291 103925319 -99160213 + AT_rich Low_complexity Low_complexity 1 28 0 372 248 134 13 chr5 103925740 103925889 -99159643 - MER102b DNA MER1_type -49 292 126 1215 170 70 43 chr5 103926245 103926475 -99159057 + AluJo SINE Alu 1 236 -76 1196 228 94 12 chr5 103927460 103927802 -99157730 - MLT1A2 LTR MaLR -4 370 1 1970 187 7 37 chr5 103927802 103928230 -99157302 - MLT1A2-int LTR MaLR 0 1735 1321 363 247 0 0 chr5 103928218 103928307 -99157225 - MLT1A2-int LTR MaLR -1281 90 2 * 1342 195 48 51 chr5 103928308 103928683 -99156849 - MLT1A2 LTR MaLR 0 374 1 1209 253 90 32 chr5 103928961 103929404 -99156128 - MER77 LTR ERV1 -6 599 131 2400 269 29 40 chr5 103930855 103931562 -99153970 + L1PA15 LINE L1 1 700 -6087 2315 110 48 20 chr5 103931562 103931916 -99153616 + THE1B LTR MaLR 1 364 0 2400 269 29 40 chr5 103931916 103932002 -99153530 + L1PA15 LINE L1 700 785 -6002 1661 233 16 7 chr5 103932017 103932451 -99153081 + L1PA15 LINE L1 1270 1707 -5080 11881 183 24 7 chr5 103932452 103933518 -99152014 + L1PA14 LINE L1 2780 3827 -2334 2465 78 0 3 chr5 103933518 103933827 -99151705 + AluY SINE Alu 1 308 -3 11881 183 24 7 chr5 103933827 103936134 -99149398 + L1PA14 LINE L1 3827 6160 -1 14237 210 24 11 chr5 103936290 103941206 -99144326 + L1PA15 LINE L1 1722 6692 -124 282 85 21 0 chr5 103941208 103941255 -99144277 + L1PA16 LINE L1 6119 6166 0 22 0 0 0 chr5 103941793 103941815 -99143717 + AT_rich Low_complexity Low_complexity 1 22 0 951 212 67 10 chr5 103942300 103942493 -99143039 - AluJo SINE Alu -108 204 1 2509 73 0 0 chr5 103943447 103943763 -99141769 - AluYb8 SINE Alu -2 316 1 2861 45 21 3 chr5 103943958 103944340 -99141192 + L1P3 LINE L1 5299 5687 -467 387 294 7 7 chr5 103944341 103944477 -99141055 - MER77-int LTR ERV1 -185 4006 3871 3523 55 4 27 chr5 103944477 103944951 -99140581 + L1PA7 LINE L1 5692 6154 0 819 80 0 9 chr5 103945455 103945567 -99139965 + L1PA7 LINE L1 6042 6152 -2 1173 264 50 85 chr5 103945578 103946177 -99139355 + MER21B-int LTR ERV1 2031 2608 -1583 298 300 12 0 chr5 103946223 103946303 -99139229 + MER21B-int LTR ERV1 2613 2693 -1498 1873 138 21 7 chr5 103946303 103946585 -99138947 + AluSq SINE Alu 1 286 -27 533 170 32 0 chr5 103946614 103946708 -99138824 + AluSg/x SINE Alu 186 282 -27 598 312 56 51 chr5 103946846 103947202 -99138330 + MER21B-int LTR ERV1 2819 3176 -1015 323 330 17 0 chr5 103947275 103947390 -99138142 + MER21B-int LTR ERV1 3203 3319 -872 2044 264 44 32 chr5 103947486 103948164 -99137368 + MER21B-int LTR ERV1 3451 4136 -55 1608 167 54 92 chr5 103948614 103949039 -99136493 + MLT2D LTR ERVL 1 409 -5 237 329 38 84 chr5 103949191 103949529 -99136003 - L2 LINE L2 -184 3088 2765 1236 218 8 59 chr5 103949676 103950034 -99135498 - MLT1A2 LTR MaLR -2 372 33 335 238 20 50 chr5 103950286 103950387 -99135145 - LTR27 LTR ERV1 -4 632 535 370 276 0 41 chr5 103950449 103950547 -99134985 - LTR27 LTR ERV1 -93 927 834 1936 203 28 45 chr5 103950585 103951356 -99134176 - LTR27 LTR ERV1 -141 495 3 1688 200 70 32 chr5 103951483 103951718 -99133814 - LTR40c LTR ERVL -5 460 236 3235 178 57 94 chr5 103951718 103952614 -99132918 + MER21B LTR ERV1 1 863 0 1688 200 70 32 chr5 103952614 103952818 -99132714 - LTR40c LTR ERVL -229 236 4 536 271 65 122 chr5 103953139 103953515 -99132017 - L1MC4a LINE L1 -1 8041 7645 1614 181 60 0 chr5 103953515 103953806 -99131726 - AluSx SINE Alu 0 307 1 536 271 65 122 chr5 103953806 103954338 -99131194 - L1MC4a LINE L1 -397 7645 7104 2047 118 92 18 chr5 103954355 103954693 -99130839 - THE1B LTR MaLR -1 363 1 1408 235 51 37 chr5 103954718 103955152 -99130380 - MLT1E2 LTR MaLR -53 573 134 1517 224 80 34 chr5 103955154 103955591 -99129941 + MSTB2 LTR MaLR 1 457 0 2190 267 102 53 chr5 103955593 103956692 -99128840 + MLT-int LTR MaLR 2 1159 -492 2013 159 22 5 chr5 103956726 103957097 -99128435 - MSTA LTR MaLR -51 377 1 901 213 25 71 chr5 103957099 103957381 -99128151 + THE1C-int LTR MaLR 1161 1429 -222 1899 149 41 25 chr5 103957388 103957751 -99127781 + THE1C LTR MaLR 7 375 0 877 149 8 116 chr5 103957752 103957944 -99127588 + MSTB2-int LTR MaLR 1426 1588 -63 2103 129 0 0 chr5 103957944 103958239 -99127293 - AluSx SINE Alu -17 295 1 877 149 8 116 chr5 103958239 103958287 -99127245 + MSTB2-int LTR MaLR 1588 1640 -11 1443 209 111 28 chr5 103958297 103958719 -99126813 + MSTB2 LTR MaLR 1 457 0 485 200 9 9 chr5 103958720 103958830 -99126702 - MLT1E3 LTR MaLR -456 168 59 226 241 24 24 chr5 103958873 103958956 -99126576 - L1MC4 LINE L1 -865 7177 7095 829 240 79 117 chr5 103958993 103959263 -99126269 - L1MC4 LINE L1 -910 7051 6772 2223 144 3 12 chr5 103959263 103959603 -99125929 + MER1B DNA MER1_type 1 337 0 829 240 79 117 chr5 103959603 103959706 -99125826 - L1MC4 LINE L1 -1189 6772 6695 543 31 0 0 chr5 103959706 103959771 -99125761 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 829 240 79 117 chr5 103959771 103959850 -99125682 - L1MC4 LINE L1 -1266 6695 6615 3216 65 0 20 chr5 103960096 103960539 -99124993 + L1PA7 LINE L1 5721 6154 0 425 265 5 15 chr5 103960937 103961133 -99124399 - L1MC4 LINE L1 -2191 5617 5334 361 267 9 9 chr5 103961253 103961358 -99124174 - L1MC5 LINE L1 -1132 6829 6725 266 280 82 35 chr5 103961420 103961677 -99123855 - L1MC4 LINE L1 -1111 5035 4767 251 292 77 0 chr5 103962143 103962208 -99123324 - MIR SINE MIR -107 101 32 4083 87 5 2 chr5 103963705 103964257 -99121275 + MER41A LTR ERV1 1 554 0 294 105 342 0 chr5 103964257 103964333 -99121199 + MER41A-int LTR ERV1 1 102 -7654 6906 109 164 35 chr5 103964343 103964868 -99120664 + MER41A-int LTR ERV1 1 457 -5489 2281 49 7 3 chr5 103964868 103965154 -99120378 - L1PA5 LINE L1 0 6154 5868 6906 109 164 35 chr5 103965154 103965903 -99119629 + MER41A-int LTR ERV1 457 1439 -4507 383 60 0 104 chr5 103965893 103965960 -99119572 + MER41A-int LTR ERV1 1604 1663 -4283 * 5325 102 7 19 chr5 103965960 103966822 -99118710 + MER41A-int LTR ERV1 2764 3615 -2331 1776 70 70 0 chr5 103966829 103967071 -99118461 - AluY SINE Alu -7 304 46 2466 130 10 2 chr5 103967171 103967580 -99117952 + L1MA1 LINE L1 5889 6300 -2 1395 107 23 0 chr5 103967602 103967845 -99117687 - L1P4 LINE L1 -637 5529 5282 1297 98 0 0 chr5 103967847 103968011 -99117521 - AluSg/x SINE Alu -22 290 127 1875 169 21 0 chr5 103968011 103968348 -99117184 - L1M2 LINE L1 -6498 351 8 1659 161 32 0 chr5 103968366 103968682 -99116850 - L1MB2 LINE L1 -43 6128 5803 25 0 0 0 chr5 103968953 103968978 -99116554 + AT_rich Low_complexity Low_complexity 1 25 0 2893 6 0 0 chr5 103969221 103969536 -99115996 + AluYb8 SINE Alu 1 315 -3 26 0 0 0 chr5 103970747 103970773 -99114759 + AT_rich Low_complexity Low_complexity 1 26 0 2031 139 0 7 chr5 103972140 103972443 -99113089 - AluJb SINE Alu 0 312 12 304 323 205 5 chr5 103972980 103973175 -99112357 - MIR SINE MIR -11 251 18 14175 198 4 6 chr5 103974965 103978297 -99107235 - L1P5 LINE L1 -717 5434 2110 226 146 85 12 chr5 103978409 103978491 -99107041 - L1MB2 LINE L1 0 6171 6084 4463 111 16 54 chr5 103978596 103979416 -99106116 - L1MA4A LINE L1 0 6303 5515 10358 155 20 8 chr5 103979417 103981762 -99103770 + L1M1 LINE L1 1880 4276 -3289 2053 125 4 0 chr5 103981762 103982041 -99103491 + AluSx SINE Alu 10 289 -23 10358 155 20 8 chr5 103982041 103982869 -99102663 + L1M1 LINE L1 4276 5092 -2473 7164 144 8 8 chr5 103982877 103984393 -99101139 + L1M1 LINE L1 5403 6917 -743 795 210 46 11 chr5 103984496 103984758 -99100774 + L1ME2 LINE L1 1168 1438 -5092 * 959 246 144 14 chr5 103984735 103985652 -99099880 + L1ME2 LINE L1 1655 6369 -189 1046 288 46 23 chr5 103985652 103985999 -99099533 - L2 LINE L2 -376 2938 2584 25 75 0 0 chr5 103986098 103986151 -99099381 + AT_rich Low_complexity Low_complexity 1 53 0 391 248 55 69 chr5 103986193 103986338 -99099194 - HAL1 LINE L1 -1539 968 826 230 274 44 30 chr5 103986397 103986532 -99099000 - L1MC4 LINE L1 -2 8040 7904 867 261 129 9 chr5 103986886 103987204 -99098328 - MLT1J LTR MaLR 0 511 156 1864 168 27 0 chr5 103987205 103987533 -99097999 - MER7A DNA MER2_type -10 336 2 1060 176 15 30 chr5 103988356 103988555 -99096977 - AluJo SINE Alu 0 312 117 454 33 0 0 chr5 103989131 103989191 -99096341 - L1PB1 LINE L1 -2 6149 6090 34580 99 16 11 chr5 103989191 103989576 -99095956 - L1PA6 LINE L1 -5 6149 5768 2503 77 0 0 chr5 103989576 103989887 -99095645 - AluY SINE Alu 0 311 1 34580 99 16 11 chr5 103989887 103995603 -99089929 - L1PA6 LINE L1 -386 5768 11 4272 125 1 0 chr5 103995606 103996279 -99089253 - L1PB1 LINE L1 -46 6105 5432 21 57 0 0 chr5 103996840 103996875 -99088657 + AT_rich Low_complexity Low_complexity 1 35 0 3413 151 8 84 chr5 103996882 103997653 -99087879 + L1MB3 LINE L1 5349 6060 -123 1219 250 91 24 chr5 103997954 103998186 -99087346 + L2 LINE L2 2869 3084 -229 2227 98 3 3 chr5 103998186 103998492 -99087040 - AluSx SINE Alu -6 306 1 1219 250 91 24 chr5 103998492 103998675 -99086857 + L2 LINE L2 3084 3312 -1 420 209 70 31 chr5 104000748 104000877 -99084655 + L2 LINE L2 3180 3313 0 215 327 80 18 chr5 104001098 104001211 -99084321 - L2 LINE L2 -473 2841 2722 819 148 214 5 chr5 104001269 104001479 -99084053 + L1MC3 LINE L1 7345 7598 -187 660 170 13 44 chr5 104001714 104001873 -99083659 + MLT1G LTR MaLR 431 584 -6 1747 194 15 44 chr5 104002780 104003188 -99082344 + MSTD LTR MaLR 1 396 0 811 224 31 78 chr5 104003570 104003892 -99081640 - MER77 LTR ERV1 -6 599 342 468 173 0 0 chr5 104003896 104003971 -99081561 + MER75 DNA T2_type 1 75 -439 1751 117 94 19 chr5 104003971 104004280 -99081252 + THE1B LTR MaLR 1 332 -32 10322 97 14 1 chr5 104004280 104005755 -99079777 + THE1B-int LTR MaLR 88 1580 0 2060 140 76 12 chr5 104005755 104006097 -99079435 + THE1B LTR MaLR 1 364 0 2854 96 14 2 chr5 104006097 104006534 -99078998 + MER75 DNA T2_type 71 512 -2 1642 308 161 14 chr5 104007446 104008247 -99077285 + L2 LINE L2 1913 2831 -483 2391 176 21 17 chr5 104008480 104008945 -99076587 - MLT1C LTR MaLR 0 467 1 1824 146 25 56 chr5 104009337 104009659 -99075873 + AluJb SINE Alu 1 312 0 1644 232 98 33 chr5 104009753 104009919 -99075613 + L1MCa LINE L1 28 182 -6244 2182 174 54 7 chr5 104009919 104010328 -99075204 - MSTA LTR MaLR 0 428 1 9490 146 22 24 chr5 104010328 104010452 -99075080 - MSTA-int LTR MaLR 0 1651 1528 1778 155 0 0 chr5 104010452 104010704 -99074828 + AluSx SINE Alu 4 255 -57 9490 146 22 24 chr5 104010704 104012233 -99073299 - MSTA-int LTR MaLR -123 1528 1 2047 158 70 32 chr5 104012233 104012645 -99072887 - MSTA LTR MaLR 0 428 1 1644 232 98 33 chr5 104012645 104013027 -99072505 + L1MCa LINE L1 181 614 -5812 1105 176 11 39 chr5 104013037 104013316 -99072216 + L1MCa LINE L1 962 1232 -5194 840 204 27 11 chr5 104013318 104013504 -99072028 + AluSg/x SINE Alu 122 310 0 2533 197 149 14 chr5 104013505 104014436 -99071096 + L1MCa LINE L1 1239 2397 -4210 191 271 24 0 chr5 104014452 104014537 -99070995 + GA-rich Low_complexity Low_complexity 2 88 0 2608 20 26 0 chr5 104014601 104014904 -99070628 - AluYa5 SINE Alu 0 311 1 642 211 0 63 chr5 104015502 104015677 -99069855 + MER58B DNA MER1_type 172 335 -6 704 286 85 9 chr5 104016014 104016238 -99069294 + MIR SINE MIR 21 261 -1 721 265 5 16 chr5 104016563 104016748 -99068784 + MIR SINE MIR 35 217 -45 180 111 0 0 chr5 104016925 104016952 -99068580 + (TATATG)n Simple_repeat Simple_repeat 1 27 0 433 188 11 34 chr5 104017701 104017877 -99067655 + (TA)n Simple_repeat Simple_repeat 2 173 0 350 161 39 26 chr5 104017894 104018049 -99067483 + (TA)n Simple_repeat Simple_repeat 1 157 0 1489 186 49 25 chr5 104019634 104019919 -99065613 - AluJo SINE Alu -20 292 1 180 294 59 0 chr5 104021410 104021461 -99064071 - L2 LINE L2 -2 3270 3217 7172 105 15 9 chr5 104021461 104021742 -99063790 + L1MA1 LINE L1 4572 4850 -1479 2283 95 0 3 chr5 104021742 104022038 -99063494 - AluY SINE Alu -16 295 1 7172 105 15 9 chr5 104022038 104023509 -99062023 + L1MA1 LINE L1 4850 6329 0 2263 70 0 0 chr5 104023831 104024102 -99061430 - AluSx SINE Alu -9 303 33 194 234 62 0 chr5 104024667 104024731 -99060801 - L3b LINE CR1 -391 1192 1125 305 202 40 0 chr5 104025349 104025448 -99060084 + (TA)n Simple_repeat Simple_repeat 1 103 0 1953 126 49 0 chr5 104026626 104026911 -99058621 + AluSx SINE Alu 1 299 -13 632 255 189 19 chr5 104027105 104027317 -99058215 - MIR SINE MIR 0 262 15 2009 73 0 0 chr5 104027382 104027666 -99057866 + AluY SINE Alu 39 322 0 210 196 65 0 chr5 104028060 104028106 -99057426 - MIR SINE MIR -79 129 81 2230 107 54 25 chr5 104028399 104028753 -99056779 + THE1B LTR MaLR 1 364 0 597 272 0 0 chr5 104028794 104028919 -99056613 + L2 LINE L2 3187 3311 -2 388 279 218 0 chr5 104029438 104029585 -99055947 - MIR3 SINE MIR -1 207 29 642 170 116 34 chr5 104029763 104029910 -99055622 - MLT1F LTR MaLR -1 541 383 482 254 52 40 chr5 104030133 104030306 -99055226 + MIR SINE MIR 81 255 -7 29 84 0 0 chr5 104030349 104030420 -99055112 + AT_rich Low_complexity Low_complexity 1 71 0 1149 270 104 62 chr5 104030637 104031119 -99054413 - MLT1G LTR MaLR -93 502 1 24 0 0 0 chr5 104031696 104031720 -99053812 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 104033328 104033350 -99052182 + AT_rich Low_complexity Low_complexity 1 22 0 1809 165 62 65 chr5 104033369 104033787 -99051745 + MSTB1 LTR MaLR 16 432 0 448 287 23 40 chr5 104035136 104035310 -99050222 - L2 LINE L2 -12 3301 3131 585 292 126 35 chr5 104035313 104035796 -99049736 - L1M4 LINE L1 -1645 4501 3975 338 277 72 36 chr5 104035837 104036032 -99049500 - HAL1b LINE L1 -685 663 462 2184 259 61 23 chr5 104036032 104036805 -99048727 + L1MC3 LINE L1 5540 6341 -1444 4273 199 79 14 chr5 104036842 104037933 -99047599 + L1MC4a LINE L1 6609 7770 -38 368 256 41 70 chr5 104037919 104038091 -99047441 - HAL1b LINE L1 -855 493 327 * 1600 208 0 0 chr5 104039587 104039899 -99045633 - AluSx SINE Alu 0 312 1 2201 131 0 0 chr5 104040604 104040916 -99044616 - AluSx SINE Alu 0 312 1 195 318 93 39 chr5 104041114 104041243 -99044289 + L2 LINE L2 3137 3272 0 481 160 13 0 chr5 104041645 104041720 -99043812 + MER21B LTR ERV1 12 87 -776 3018 204 65 60 chr5 104041755 104042524 -99043008 + MER21B LTR ERV1 22 794 -69 189 195 0 0 chr5 104043047 104043088 -99042444 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 400 209 46 78 chr5 104043258 104043411 -99042121 - MLT1H LTR MaLR 0 549 402 225 81 0 27 chr5 104043514 104043551 -99041981 - MLT1H LTR MaLR -395 154 119 360 348 146 0 chr5 104044137 104044301 -99041231 + MIR SINE MIR 20 207 -55 735 234 76 15 chr5 104044329 104044526 -99041006 - MER46C DNA MER2_type -6 332 124 22 0 0 0 chr5 104044617 104044639 -99040893 + AT_rich Low_complexity Low_complexity 1 22 0 2412 74 3 6 chr5 104045770 104046082 -99039450 - AluY SINE Alu 0 311 1 1474 217 36 19 chr5 104046241 104046600 -99038932 + MLT1A1 LTR MaLR 1 365 0 4055 229 42 25 chr5 104046780 104048668 -99036864 - L1ME1 LINE L1 -137 6029 4118 1279 79 0 0 chr5 104048668 104048864 -99036668 - AluY SINE Alu 0 314 119 673 221 168 8 chr5 104048874 104049118 -99036414 - L1ME1 LINE L1 -2019 4127 3845 861 212 57 0 chr5 104051719 104051912 -99033620 - MIR SINE MIR -58 204 1 1003 253 29 4 chr5 104051942 104052183 -99033349 - MIR SINE MIR -2 260 14 187 284 122 52 chr5 104052564 104052835 -99032697 + L2 LINE L2 1987 2276 -1038 431 328 59 10 chr5 104053276 104053487 -99032045 - MIR SINE MIR -28 234 15 23 0 0 0 chr5 104053732 104053755 -99031777 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 104054012 104054037 -99031495 + AT_rich Low_complexity Low_complexity 1 25 0 983 284 109 16 chr5 104054254 104054702 -99030830 + LTR16C LTR ERVL 2 491 0 5822 168 15 6 chr5 104054817 104056784 -99028748 - L1PA15 LINE L1 0 6816 4833 2243 50 10 27 chr5 104056828 104057127 -99028405 + L1PA8 LINE L1 5864 6157 -15 3134 216 25 7 chr5 104057156 104057847 -99027685 - L1PA15 LINE L1 -4749 2038 1336 2293 307 20 38 chr5 104058047 104058862 -99026670 - L1PA15 LINE L1 -5987 800 1 357 24 0 0 chr5 104059305 104059347 -99026185 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 221 33 33 chr5 104059568 104059690 -99025842 + (TATAA)n Simple_repeat Simple_repeat 5 126 0 827 222 0 0 chr5 104059780 104059933 -99025599 - AluJb SINE Alu -28 284 132 298 177 0 22 chr5 104059965 104060070 -99025462 - FLAM_A SINE Alu -2 131 1 2779 132 26 15 chr5 104060070 104060526 -99025006 - MER31A LTR ERV1 -21 464 4 584 347 161 53 chr5 104063145 104063625 -99021907 - HAL1b LINE L1 -73 1275 848 324 0 0 0 chr5 104063625 104063661 -99021871 + (TA)n Simple_repeat Simple_repeat 2 37 0 584 347 161 53 chr5 104063661 104063761 -99021771 - HAL1b LINE L1 -500 848 760 2126 72 40 4 chr5 104063761 104064037 -99021495 - AluY SINE Alu -25 286 1 584 347 161 53 chr5 104064037 104064512 -99021020 - HAL1b LINE L1 -588 760 105 480 279 69 92 chr5 104066840 104067231 -99018301 - L2 LINE L2 -4 3268 2887 531 297 16 38 chr5 104067327 104067512 -99018020 - MER5A DNA MER1_type -2 187 7 1623 260 70 30 chr5 104070870 104071367 -99014165 - LTR40a LTR ERVL -2 517 1 554 255 32 19 chr5 104071395 104071552 -99013980 - MIR SINE MIR -15 247 89 452 323 100 79 chr5 104071601 104072453 -99013079 + L2 LINE L2 2365 3239 -33 789 149 8 15 chr5 104072469 104072603 -99012929 - FLAM_C SINE Alu 0 133 1 246 315 49 7 chr5 104074103 104074246 -99011286 + L2 LINE L2 1932 2080 -1234 473 341 97 35 chr5 104076657 104077029 -99008503 + L2 LINE L2 2869 3263 -9 1016 98 13 26 chr5 104077474 104077627 -99007905 - MER1B DNA MER1_type -4 329 179 1413 175 22 0 chr5 104077668 104077897 -99007635 - MER1B DNA MER1_type -63 234 1 6654 132 39 21 chr5 104077948 104079157 -99006375 - Tigger3b DNA MER2_type 0 1231 2 203 279 0 0 chr5 104080537 104080580 -99004952 - L3 LINE CR1 -14 1563 1521 1139 169 84 11 chr5 104081291 104081552 -99003980 - L1MA9 LINE L1 -38 6274 5995 205 254 36 130 chr5 104081690 104081828 -99003704 - MIR3 SINE MIR -70 138 14 2204 115 3 10 chr5 104082495 104082844 -99002688 - AluSx SINE Alu 0 347 1 1510 206 22 19 chr5 104083864 104084228 -99001304 + MLT1A1 LTR MaLR 1 365 0 4200 53 1 3 chr5 104084279 104085110 -99000422 + L1PA6 LINE L1 4958 5787 -367 7714 23 0 0 chr5 104085110 104086006 -98999526 + L1PA3 LINE L1 5255 6152 -3 2793 69 24 3 chr5 104086049 104086425 -98999107 + L1PA6 LINE L1 5770 6153 -1 442 235 143 36 chr5 104086654 104086850 -98998682 - HAL1 LINE L1 -6 2501 2285 395 258 0 11 chr5 104086989 104087082 -98998450 - MLT1J LTR MaLR -310 201 110 1656 226 144 97 chr5 104087528 104088697 -98996835 - HAL1 LINE L1 -696 1811 588 338 278 122 61 chr5 104088843 104089088 -98996444 - HAL1 LINE L1 -2197 310 51 261 280 84 21 chr5 104090152 104090295 -98995237 + L1ME LINE L1 5672 5823 -298 26 50 0 0 chr5 104091459 104091499 -98994033 + AT_rich Low_complexity Low_complexity 1 40 0 14976 123 16 26 chr5 104092312 104092532 -98993000 + Tigger1 DNA MER2_type 2 223 -2195 2664 26 0 16 chr5 104092532 104092845 -98992687 + AluY SINE Alu 1 308 -3 14976 123 16 26 chr5 104092845 104092904 -98992628 + Tigger1 DNA MER2_type 223 281 -2137 2421 161 26 2 chr5 104092904 104093320 -98992212 - MSTB LTR MaLR 0 426 1 14976 123 16 26 chr5 104093320 104095479 -98990053 + Tigger1 DNA MER2_type 281 2417 -1 306 67 0 0 chr5 104095491 104095536 -98989996 + (TG)n Simple_repeat Simple_repeat 2 46 0 198 336 9 36 chr5 104095842 104095952 -98989580 - L2 LINE L2 -352 2961 2855 269 271 0 0 chr5 104096428 104096487 -98989045 + L1ME2 LINE L1 6087 6145 -19 234 254 71 91 chr5 104096541 104096738 -98988794 + L1MC4 LINE L1 7832 8024 -18 183 80 0 0 chr5 104097172 104097197 -98988335 + (TC)n Simple_repeat Simple_repeat 2 26 0 476 121 0 12 chr5 104100947 104101030 -98984502 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 1857 127 22 0 chr5 104101053 104101320 -98984212 - AluSx SINE Alu -39 273 1 734 256 63 5 chr5 104101407 104101614 -98983918 + MIR SINE MIR 43 261 -1 353 228 282 34 chr5 104101743 104101949 -98983583 + MIR SINE MIR 4 260 -2 1481 173 11 27 chr5 104102754 104103014 -98982518 - AluJo SINE Alu -33 279 24 351 245 182 28 chr5 104103015 104103158 -98982374 + MIR SINE MIR 56 220 -42 245 224 17 0 chr5 104103894 104103952 -98981580 + CT-rich Low_complexity Low_complexity 3 61 0 539 242 0 27 chr5 104105127 104105272 -98980260 - MIR SINE MIR -67 141 3 207 292 58 123 chr5 104105902 104106073 -98979459 + L2 LINE L2 3015 3174 -98 374 153 28 0 chr5 104107284 104107356 -98978176 - MER116 DNA Mariner -6 74 1 780 298 82 93 chr5 104107747 104107820 -98977712 + L2 LINE L2 2832 2904 -409 577 225 166 0 chr5 104107820 104107971 -98977561 - MER45A DNA AcHobo -2 176 1 780 298 82 93 chr5 104107971 104108383 -98977149 + L2 LINE L2 2904 3312 -1 183 235 0 0 chr5 104110817 104110868 -98974664 + (TA)n Simple_repeat Simple_repeat 1 51 0 266 296 14 0 chr5 104112689 104112760 -98972772 + tRNA-Ile-ATT tRNA tRNA 3 74 -3 399 296 46 45 chr5 104113043 104113199 -98972333 - MIR SINE MIR -63 145 28 22 0 0 0 chr5 104113990 104114012 -98971520 + AT_rich Low_complexity Low_complexity 1 22 0 1931 166 19 3 chr5 104114109 104114416 -98971116 - AluJb SINE Alu 0 312 1 208 409 63 0 chr5 104115505 104115664 -98969868 + L3b LINE CR1 1402 1570 -13 182 381 38 9 chr5 104115996 104116101 -98969431 + MER5A DNA MER1_type 38 145 -44 21 71 0 0 chr5 104118176 104118218 -98967314 + AT_rich Low_complexity Low_complexity 1 42 0 29 0 0 0 chr5 104118246 104118275 -98967257 + AT_rich Low_complexity Low_complexity 1 29 0 1725 158 7 14 chr5 104119423 104119715 -98965817 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 104120008 104120029 -98965503 + AT_rich Low_complexity Low_complexity 1 21 0 397 326 122 31 chr5 104120031 104120350 -98965182 + L2 LINE L2 2361 2708 -606 793 278 126 44 chr5 104120414 104121115 -98964417 + L1MC4a LINE L1 5173 5403 -743 235 385 20 14 chr5 104121842 104121990 -98963542 + L2 LINE L2 2130 2278 -1036 362 346 41 82 chr5 104122325 104122813 -98962719 + L2 LINE L2 2805 3272 0 2014 136 7 0 chr5 104123189 104123483 -98962049 - AluSx SINE Alu -14 298 3 354 162 68 0 chr5 104123507 104123581 -98961951 + MER116 DNA Mariner 2 80 0 6216 165 90 18 chr5 104123677 104123919 -98961613 + Charlie1a DNA MER1_type 1 224 -2537 2267 93 0 20 chr5 104123919 104124242 -98961290 + AluSx SINE Alu 1 312 0 6216 165 90 18 chr5 104124242 104125355 -98960177 + Charlie1a DNA MER1_type 224 1454 -1 308 336 22 7 chr5 104125615 104125752 -98959780 - L2 LINE L2 -1984 1330 1192 236 200 100 0 chr5 104127322 104127372 -98958160 + L2 LINE L2 3258 3312 -1 180 340 0 0 chr5 104127430 104127483 -98958049 - L2 LINE L2 -5 3308 3256 2081 75 35 23 chr5 104127590 104127935 -98957597 + L1MA3 LINE L1 3314 3662 -3903 * 2999 185 30 0 chr5 104127928 104128560 -98956972 + L1MA3 LINE L1 4269 4919 -2646 1561 183 10 0 chr5 104128554 104128844 -98956688 + L1MA3 LINE L1 6115 6407 -1158 * 1560 191 53 5 chr5 104129491 104129868 -98955664 + L1MA3 LINE L1 6368 6762 -803 2218 122 3 0 chr5 104129868 104130172 -98955360 + AluSx SINE Alu 1 305 -7 4900 85 3 29 chr5 104130173 104130899 -98954633 + L1MA3 LINE L1 7018 7724 0 403 167 0 0 chr5 104131194 104131260 -98954272 - MLT1K LTR MaLR -355 233 168 314 295 0 0 chr5 104131287 104131365 -98954167 + L2 LINE L2 3169 3246 -26 1049 224 11 24 chr5 104131428 104131679 -98953853 + MIR SINE MIR 10 261 -1 902 219 0 0 chr5 104131801 104131984 -98953548 - L1PA16 LINE L1 -9 6157 5975 262 244 213 8 chr5 104132090 104132217 -98953315 + MIR SINE MIR 110 262 0 200 381 48 0 chr5 104132537 104132663 -98952869 + L3b LINE CR1 1366 1497 -86 249 252 99 45 chr5 104132829 104132940 -98952592 - L2 LINE L2 0 3313 3197 388 266 55 39 chr5 104133261 104133389 -98952143 - MLT1K LTR MaLR -332 256 127 254 189 0 19 chr5 104133939 104133992 -98951540 + L2 LINE L2 3262 3313 0 21 0 0 0 chr5 104134366 104134387 -98951145 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr5 104135102 104135142 -98950390 + AT_rich Low_complexity Low_complexity 1 40 0 7021 54 4 11 chr5 104135650 104136694 -98948838 + L1PA8 LINE L1 5134 6171 -1 290 280 7 35 chr5 104137939 104138082 -98947450 + CT-rich Low_complexity Low_complexity 1 139 0 528 354 104 48 chr5 104138083 104138399 -98947133 - L2 LINE L2 -22 3250 2917 334 329 0 32 chr5 104138454 104138609 -98946923 - L2 LINE L2 -584 2730 2581 233 271 0 17 chr5 104138637 104138696 -98946836 - MIR SINE MIR -135 73 16 396 0 0 0 chr5 104139599 104139643 -98945889 + (CA)n Simple_repeat Simple_repeat 2 45 0 570 282 37 6 chr5 104139782 104139945 -98945587 + MER5B DNA MER1_type 1 168 -10 1063 147 57 19 chr5 104139963 104140174 -98945358 - MER20 DNA MER1_type 0 219 1 390 279 107 13 chr5 104140671 104140904 -98944628 + L1M4 LINE L1 4592 4846 -1300 369 296 21 4 chr5 104141664 104141784 -98943748 - MIR SINE MIR -64 144 32 22 35 0 0 chr5 104142490 104142519 -98943013 + AT_rich Low_complexity Low_complexity 1 29 0 590 250 0 8 chr5 104143593 104143717 -98941815 + L2 LINE L2 3191 3313 0 244 337 163 0 chr5 104144823 104144921 -98940611 + L2 LINE L2 3181 3294 -19 1250 192 9 0 chr5 104144942 104145166 -98940366 - AluJo SINE Alu -3 309 84 523 265 108 27 chr5 104145400 104145585 -98939947 + MIR SINE MIR 63 262 0 26 0 0 0 chr5 104146765 104146791 -98938741 + AT_rich Low_complexity Low_complexity 1 26 0 2186 113 3 0 chr5 104147652 104147952 -98937580 + AluSx SINE Alu 1 301 -11 252 86 0 0 chr5 104148064 104148099 -98937433 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 849 191 6 42 chr5 104148156 104148324 -98937208 + AluJo SINE Alu 1 162 -150 31682 106 13 56 chr5 104148544 104152844 -98932688 - L1PA7 LINE L1 -11 6143 2218 2066 122 28 0 chr5 104152844 104153132 -98932400 + AluSg SINE Alu 1 296 -14 31682 106 13 56 chr5 104153132 104155248 -98930284 - L1PA7 LINE L1 -3936 2218 12 2355 195 17 31 chr5 104155257 104155800 -98929732 + MER97b DNA MER1_type? 75 609 -444 2104 133 0 0 chr5 104155970 104156293 -98929239 - AluSx SINE Alu 0 324 2 233 186 18 150 chr5 104156295 104156364 -98929168 + MER97b DNA MER1_type? 936 986 -67 2182 103 0 10 chr5 104156364 104156656 -98928876 + AluSg SINE Alu 2 290 -20 233 186 18 150 chr5 104156656 104156699 -98928833 + MER97b DNA MER1_type? 986 1033 -20 183 42 0 0 chr5 104157609 104157633 -98927899 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1618 157 22 15 chr5 104157635 104157903 -98927629 - AluJo SINE Alu -32 280 11 24 0 0 0 chr5 104158553 104158577 -98926955 + AT_rich Low_complexity Low_complexity 1 24 0 24 77 0 0 chr5 104158801 104158853 -98926679 + AT_rich Low_complexity Low_complexity 1 52 0 36 0 0 0 chr5 104159774 104159810 -98925722 + AT_rich Low_complexity Low_complexity 1 36 0 240 377 69 15 chr5 104159826 104159956 -98925576 - L2 LINE L2 0 3272 3136 28 29 0 0 chr5 104163094 104163129 -98922403 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 104163607 104163629 -98921903 + AT_rich Low_complexity Low_complexity 1 22 0 208 386 7 29 chr5 104165285 104165425 -98920107 + MER5A DNA MER1_type 43 179 -10 199 319 0 14 chr5 104165861 104165930 -98919602 + L2 LINE L2 2780 2847 -467 193 284 147 21 chr5 104166567 104166662 -98918870 - L2 LINE L2 -8 3264 3158 180 308 77 15 chr5 104166730 104166795 -98918737 - L2 LINE L2 -55 3217 3149 180 0 0 0 chr5 104167067 104167087 -98918445 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 184 331 118 24 chr5 104167405 104167532 -98918000 + L2 LINE L2 3133 3271 -1 207 269 118 34 chr5 104167586 104167705 -98917827 - L2 LINE L2 -65 3248 3120 204 53 18 88 chr5 104169614 104169671 -98915861 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 22 0 0 0 chr5 104171473 104171495 -98914037 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5 104175158 104175194 -98910338 + AT_rich Low_complexity Low_complexity 1 36 0 274 325 117 15 chr5 104175970 104176167 -98909365 + MIR SINE MIR 2 218 -44 21 57 0 0 chr5 104176329 104176364 -98909168 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 104176371 104176399 -98909133 + AT_rich Low_complexity Low_complexity 1 28 0 1908 286 137 16 chr5 104177573 104178592 -98906940 + L2 LINE L2 1978 3168 -145 2150 81 24 65 chr5 104178592 104178963 -98906569 - L1MA4A LINE L1 -6 6297 5942 1908 286 137 16 chr5 104178963 104179121 -98906411 + L2 LINE L2 3168 3306 -7 21 36 0 0 chr5 104179712 104179740 -98905792 + AT_rich Low_complexity Low_complexity 1 28 0 668 301 142 0 chr5 104179750 104179969 -98905563 - MIR SINE MIR -3 259 10 34 0 0 0 chr5 104180973 104181007 -98904525 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 104181954 104181976 -98903556 + AT_rich Low_complexity Low_complexity 1 22 0 2327 89 0 0 chr5 104186123 104186414 -98899118 + AluSc SINE Alu 1 291 -18 603 279 39 22 chr5 104187593 104187905 -98897627 + HAL1b LINE L1 70 386 -962 227 283 30 76 chr5 104187939 104188137 -98897395 + L1MDa LINE L1 17 205 -6335 1238 182 35 3 chr5 104188195 104188538 -98896994 + L1MA4A LINE L1 5861 6275 -25 2439 234 85 68 chr5 104188565 104189250 -98896282 + L1M4 LINE L1 2570 3242 -2904 1961 136 13 10 chr5 104189250 104189551 -98895981 + AluSq SINE Alu 1 302 -11 2439 234 85 68 chr5 104189551 104190240 -98895292 + L1M4 LINE L1 3242 3967 -2179 2205 105 3 46 chr5 104190262 104190587 -98894945 + AluSx SINE Alu 1 311 -1 6626 71 1 1 chr5 104190627 104192123 -98893409 - L1PA7 LINE L1 0 6154 4656 2741 86 0 3 chr5 104192123 104192505 -98893027 + L1PA7 LINE L1 4265 4645 -1501 842 285 15 8 chr5 104192483 104192750 -98892782 + L1M4 LINE L1 3971 4239 -1907 * 2122 130 0 10 chr5 104192875 104193182 -98892350 - AluSx SINE Alu -8 304 1 244 312 18 9 chr5 104193623 104193732 -98891800 - L1M4 LINE L1 -1539 4607 4498 941 107 0 0 chr5 104194486 104194608 -98890924 + AluSq/x SINE Alu 1 122 -190 4953 57 0 3 chr5 104194660 104195280 -98890252 - L1PA7 LINE L1 -2 6152 5535 491 196 0 0 chr5 104195280 104195377 -98890155 + L1ME3A LINE L1 2676 2772 -3374 * 493 230 244 19 chr5 104195370 104195579 -98889953 + L1ME1 LINE L1 5790 6045 -121 539 321 138 35 chr5 104196044 104196564 -98888968 - L2 LINE L2 -338 2976 2403 1592 146 27 82 chr5 104196869 104197198 -98888334 + MER7A DNA MER2_type 5 313 -33 1653 161 90 6 chr5 104198506 104198817 -98886715 + MER2 DNA MER2_type 1 337 -8 22 0 0 0 chr5 104199212 104199234 -98886298 + AT_rich Low_complexity Low_complexity 1 22 0 191 35 0 35 chr5 104199819 104199848 -98885684 + (CAT)n Simple_repeat Simple_repeat 3 30 0 2360 74 0 10 chr5 104200310 104200609 -98884923 + AluY SINE Alu 1 296 -15 353 276 99 70 chr5 104201086 104201661 -98883871 + L1ME3A LINE L1 4057 4648 -1498 * 1478 243 111 72 chr5 104201656 104201807 -98883725 + L1ME3A LINE L1 5055 5199 -971 2255 95 3 0 chr5 104201807 104202111 -98883421 + AluY SINE Alu 1 305 -6 1478 243 111 72 chr5 104202111 104202797 -98882735 + L1ME3A LINE L1 5199 5939 -231 3572 157 39 17 chr5 104202797 104203487 -98882045 + L1MB3 LINE L1 5479 6183 0 1478 243 111 72 chr5 104203487 104203719 -98881813 + L1ME3A LINE L1 5939 6161 -9 264 366 81 23 chr5 104203848 104204069 -98881463 + MIR SINE MIR 29 262 0 1976 165 98 33 chr5 104204117 104204577 -98880955 - LTR2B LTR ERV1 0 490 1 14303 185 35 49 chr5 104204788 104209285 -98876247 + L1PB1 LINE L1 91 4648 -2219 937 110 0 0 chr5 104209285 104209412 -98876120 - AluSp/q SINE Alu -13 300 174 14303 185 35 49 chr5 104209412 104209731 -98875801 + L1PB1 LINE L1 4648 4970 -1897 180 0 0 0 chr5 104209731 104209751 -98875781 + (CAA)n Simple_repeat Simple_repeat 2 21 0 14303 185 35 49 chr5 104209751 104211482 -98874050 + L1PB1 LINE L1 4970 6867 0 28 29 0 0 chr5 104212773 104212808 -98872724 + AT_rich Low_complexity Low_complexity 1 35 0 5141 110 21 18 chr5 104213200 104213972 -98871560 - MER4E LTR ERV1 -5 774 1 365 241 213 0 chr5 104214346 104214454 -98871078 - MER5A DNA MER1_type 0 189 59 2383 61 3 16 chr5 104214724 104215034 -98870498 + AluY SINE Alu 1 306 -5 2381 80 0 3 chr5 104215120 104215421 -98870111 - AluSc SINE Alu -9 300 1 609 229 59 35 chr5 104217541 104217711 -98867821 - MER5B DNA MER1_type -1 177 4 795 167 0 8 chr5 104217873 104218005 -98867527 + FLAM_C SINE Alu 1 131 -2 194 320 186 13 chr5 104218022 104218178 -98867354 + MIR SINE MIR 19 201 -7 233 325 12 24 chr5 104218267 104218350 -98867182 - MER117 DNA MER1_type -1 196 115 4086 104 44 10 chr5 104218745 104219359 -98866173 + MER41B LTR ERV1 1 635 0 294 340 50 0 chr5 104220974 104221074 -98864458 + L2 LINE L2 3136 3240 -32 1384 172 95 26 chr5 104221908 104222181 -98863351 + AluJo SINE Alu 3 294 -18 239 256 70 35 chr5 104222326 104222412 -98863120 - L2 LINE L2 -47 3225 3137 2334 54 0 4 chr5 104222683 104222959 -98862573 - AluY SINE Alu -11 300 26 2523 146 59 83 chr5 104223031 104223656 -98861876 + LTR9 LTR ERV1 3 612 0 4245 130 4 59 chr5 104223864 104224595 -98860937 + LTR8 LTR ERV1 1 691 0 259 331 16 25 chr5 104224878 104224999 -98860533 - MIR SINE MIR 0 262 143 3045 83 17 3 chr5 104225001 104225518 -98860014 - LTR10C LTR ERV1 0 591 1 2117 93 0 4 chr5 104225537 104225817 -98859715 + AluSq SINE Alu 21 299 -14 270 200 39 85 chr5 104226159 104226289 -98859243 + L1ME LINE L1 5696 5819 -302 1583 184 0 4 chr5 104226515 104226776 -98858756 - AluJb SINE Alu -52 260 1 1491 193 38 0 chr5 104227188 104227453 -98858079 + AluJb SINE Alu 1 275 -37 31 0 0 0 chr5 104227458 104227489 -98858043 + AT_rich Low_complexity Low_complexity 1 31 0 248 239 75 0 chr5 104227696 104227763 -98857769 + Charlie8 DNA MER1_type 2346 2417 0 373 278 186 38 chr5 104227896 104228187 -98857345 + HAL1 LINE L1 1220 1553 -954 1386 236 171 8 chr5 104228236 104228714 -98856818 + L1ME1 LINE L1 5582 6137 -29 25 0 0 0 chr5 104228795 104228820 -98856712 + AT_rich Low_complexity Low_complexity 1 25 0 2112 87 0 14 chr5 104228927 104229215 -98856317 + AluY SINE Alu 1 313 0 262 0 0 0 chr5 104229215 104229244 -98856288 + (CAAAA)n Simple_repeat Simple_repeat 2 105 0 29 0 0 0 chr5 104229431 104229460 -98856072 + AT_rich Low_complexity Low_complexity 1 29 0 2432 109 11 19 chr5 104229663 104230039 -98855493 - THE1C LTR MaLR -2 373 1 9904 106 39 42 chr5 104230039 104231624 -98853908 - THE1C-int LTR MaLR 0 1580 1 437 114 29 0 chr5 104231624 104231694 -98853838 - THE1C LTR MaLR 0 375 304 2146 87 62 13 chr5 104231734 104232043 -98853489 - THE1C LTR MaLR -50 325 2 24 53 0 0 chr5 104232099 104232137 -98853395 + AT_rich Low_complexity Low_complexity 1 38 0 1376 272 50 41 chr5 104232762 104233221 -98852311 + LTR16B LTR ERVL 1 463 -1 2231 114 7 0 chr5 104233326 104233633 -98851899 - AluY SINE Alu -2 309 1 436 246 54 39 chr5 104234346 104234476 -98851056 + MIR SINE MIR 111 242 -20 252 0 0 0 chr5 104234912 104234940 -98850592 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6062 114 17 5 chr5 104236410 104238144 -98847388 - L1PA15 LINE L1 -10 6155 4406 2462 84 0 0 chr5 104238144 104238455 -98847077 - AluY SINE Alu 0 311 1 729 320 117 18 chr5 104238708 104239161 -98846371 - L2 LINE L2 0 3313 2816 1159 233 55 21 chr5 104239616 104239942 -98845590 - MER2 DNA MER2_type -8 337 1 23 0 0 0 chr5 104240025 104240048 -98845484 + AT_rich Low_complexity Low_complexity 1 23 0 336 64 0 0 chr5 104242089 104242136 -98843396 + (TG)n Simple_repeat Simple_repeat 2 48 0 186 43 0 0 chr5 104242602 104242625 -98842907 + (CA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr5 104242972 104243002 -98842530 + AT_rich Low_complexity Low_complexity 1 30 0 364 204 112 20 chr5 104245595 104245693 -98839839 + MER5A DNA MER1_type 3 109 -80 2304 100 7 3 chr5 104245713 104246014 -98839518 + AluSx SINE Alu 1 302 -10 2277 121 0 29 chr5 104246311 104246658 -98838874 - MER1B DNA MER1_type 0 337 1 2943 143 9 4 chr5 104247286 104247746 -98837786 + LTR32 LTR ERVL 10 471 0 245 342 0 13 chr5 104248588 104248667 -98836865 + 7SK RNA RNA 1 78 -115 2251 93 7 17 chr5 104252150 104252452 -98833080 - AluSq SINE Alu -14 299 1 353 299 199 10 chr5 104253350 104253551 -98831981 - MIR SINE MIR -21 241 3 458 270 170 43 chr5 104255209 104255285 -98830247 + L2 LINE L2 2976 3041 -272 194 33 67 0 chr5 104255285 104255315 -98830217 + (CATCT)n Simple_repeat Simple_repeat 1 32 0 458 270 170 43 chr5 104255315 104255538 -98829994 + L2 LINE L2 3041 3313 0 1093 158 112 0 chr5 104255892 104256088 -98829444 - MER20 DNA MER1_type 0 219 2 408 200 0 0 chr5 104256245 104256335 -98829197 + CT-rich Low_complexity Low_complexity 4 93 0 196 264 35 46 chr5 104256906 104256993 -98828539 + L2 LINE L2 3134 3219 -94 273 273 57 11 chr5 104257356 104257444 -98828088 + MIR SINE MIR 161 252 -10 1700 239 91 9 chr5 104258081 104258663 -98826869 - Charlie7 DNA MER1_type -97 2515 1886 2951 260 81 42 chr5 104258682 104259990 -98825542 - Charlie7 DNA MER1_type -1138 1474 116 270 190 0 69 chr5 104260107 104260165 -98825367 + L2 LINE L2 3217 3270 -2 400 260 37 40 chr5 104262262 104262535 -98822997 + L1ME LINE L1 5515 5822 -299 239 133 22 0 chr5 104262672 104262717 -98822815 + CT-rich Low_complexity Low_complexity 3 48 0 24 32 0 0 chr5 104262927 104262958 -98822574 + AT_rich Low_complexity Low_complexity 1 31 0 282 209 0 162 chr5 104263101 104263206 -98822326 + MIR3 SINE MIR 116 203 -5 22 35 0 0 chr5 104263675 104263704 -98821828 + AT_rich Low_complexity Low_complexity 1 29 0 2321 101 0 0 chr5 104264157 104264465 -98821067 - AluSc SINE Alu -1 308 1 2564 234 21 54 chr5 104264767 104265539 -98819993 + L1M4 LINE L1 16 761 -5781 2877 130 54 28 chr5 104265566 104266105 -98819427 + L1MB7 LINE L1 5624 6176 -8 873 255 52 0 chr5 104266177 104266389 -98819143 - MER58A DNA MER1_type 0 224 2 216 0 0 0 chr5 104266569 104266593 -98818939 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2082 110 25 0 chr5 104266602 104266756 -98818776 - AluSq SINE Alu -25 288 122 243 0 0 0 chr5 104266756 104266783 -98818749 + (TG)n Simple_repeat Simple_repeat 2 28 0 2082 110 25 0 chr5 104266783 104266909 -98818623 - AluSq SINE Alu -191 122 1 3676 255 93 51 chr5 104267489 104269570 -98815962 + L1ME1 LINE L1 55 2222 -4174 3285 234 46 25 chr5 104269566 104269902 -98815630 + L1ME1 LINE L1 4856 5183 -1052 * 2202 110 0 0 chr5 104269902 104270194 -98815338 + AluSg SINE Alu 1 292 -18 3285 234 46 25 chr5 104270194 104270633 -98814899 + L1ME1 LINE L1 5183 5611 -624 2286 103 0 0 chr5 104270633 104270933 -98814599 - AluSc SINE Alu -9 300 1 3285 234 46 25 chr5 104270933 104271024 -98814508 + L1ME1 LINE L1 5611 5699 -536 932 167 109 113 chr5 104271024 104271191 -98814341 - MER8 DNA MER2_type -1 238 71 2155 106 24 0 chr5 104271191 104271484 -98814048 - AluSp SINE Alu -13 300 1 932 167 109 113 chr5 104271484 104271555 -98813977 - MER8 DNA MER2_type -168 71 1 3285 234 46 25 chr5 104271555 104272018 -98813514 + L1ME1 LINE L1 5699 6210 -25 2034 139 43 12 chr5 104272938 104273262 -98812270 + MER1B DNA MER1_type 4 337 0 184 368 13 0 chr5 104273307 104273383 -98812149 + MIR SINE MIR 72 148 -114 24 0 0 0 chr5 104275149 104275173 -98810359 + AT_rich Low_complexity Low_complexity 1 24 0 1107 241 105 58 chr5 104276734 104277116 -98808416 + MLT1K LTR MaLR 3 411 -65 1543 169 22 11 chr5 104277116 104277394 -98808138 - AluJo SINE Alu -16 296 16 1107 241 105 58 chr5 104277394 104277460 -98808072 + MLT1K LTR MaLR 411 472 -4 229 232 0 87 chr5 104277847 104277916 -98807616 - L2 LINE L2 -4 3309 3247 713 199 8 0 chr5 104278024 104278155 -98807377 - MER94 DNA DNA -2 132 1 393 272 19 10 chr5 104278502 104278605 -98806927 - MIR SINE MIR -86 176 73 209 176 0 0 chr5 104278960 104278994 -98806538 + GA-rich Low_complexity Low_complexity 3 36 0 237 132 0 0 chr5 104279033 104279071 -98806461 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 909 207 35 39 chr5 104279329 104279532 -98806000 - MER58A DNA MER1_type -2 222 21 1622 235 47 42 chr5 104280315 104280827 -98804705 + MER39 LTR ERV1 7 702 -5 736 208 127 6 chr5 104282282 104282455 -98803077 + MER39 LTR ERV1 411 604 -103 5333 188 55 7 chr5 104282455 104283681 -98801851 + L1 LINE L1 2680 3964 -2182 521 243 0 0 chr5 104283681 104283792 -98801740 + AluJo/FLAM SINE Alu 1 111 -201 302 143 0 0 chr5 104283793 104283874 -98801658 + Alu SINE Alu 241 321 0 1654 86 45 8 chr5 104283875 104284142 -98801390 - L1M1 LINE L1 -683 5620 5344 1164 200 41 0 chr5 104284143 104284245 -98801287 - AluJo SINE Alu -83 229 133 276 30 0 0 chr5 104284245 104284278 -98801254 + (TTA)n Simple_repeat Simple_repeat 3 35 0 1164 200 41 0 chr5 104284278 104284395 -98801137 - AluJo SINE Alu -179 133 1 3702 138 28 22 chr5 104284395 104285082 -98800450 + L1MA4A LINE L1 5607 6297 -6 389 202 29 19 chr5 104285106 104285210 -98800322 + MER39 LTR ERV1 598 702 -5 376 272 0 22 chr5 104285212 104285304 -98800228 + MER58B DNA MER1_type 252 341 0 1754 183 0 7 chr5 104285477 104285777 -98799755 + AluJo SINE Alu 2 299 -13 12800 155 51 14 chr5 104285930 104286368 -98799164 - L1PA15-16 LINE L1 -3552 3297 2876 459 0 0 0 chr5 104286368 104286419 -98799113 + (TG)n Simple_repeat Simple_repeat 2 52 0 12800 155 51 14 chr5 104286419 104288478 -98797054 - L1PA15-16 LINE L1 -3973 2876 780 306 260 39 0 chr5 104288478 104288555 -98796977 + L2 LINE L2 3234 3313 0 254 258 0 0 chr5 104288733 104288795 -98796737 + MIR SINE MIR 92 153 -109 411 284 47 14 chr5 104289386 104289534 -98795998 - MIR SINE MIR -6 256 104 510 316 115 58 chr5 104289629 104289977 -98795555 - L2 LINE L2 -37 3235 2868 225 206 151 14 chr5 104289967 104290040 -98795492 - MER91B DNA MER1_type -37 153 71 * 380 317 30 30 chr5 104290072 104290274 -98795258 - L2 LINE L2 -435 2879 2678 386 111 0 152 chr5 104290439 104290538 -98794994 + MER5A DNA MER1_type 26 109 -80 778 134 0 0 chr5 104290990 104291109 -98794423 + FLAM_C SINE Alu 23 141 -2 2263 69 22 0 chr5 104291246 104291550 -98793982 - AluY SINE Alu 0 311 2 746 232 107 11 chr5 104291776 104291984 -98793548 + MIR SINE MIR 12 236 -26 1731 206 47 13 chr5 104292780 104293163 -98792369 - MSTD LTR MaLR 0 396 1 6372 87 9 4 chr5 104293351 104295234 -98790298 - L1PA12 LINE L1 0 6168 4261 27 62 0 0 chr5 104295399 104295447 -98790085 + AT_rich Low_complexity Low_complexity 1 48 0 631 257 23 37 chr5 104296388 104296606 -98788926 + MIR SINE MIR 44 258 -4 207 125 0 0 chr5 104297826 104297866 -98787666 + (TC)n Simple_repeat Simple_repeat 2 41 0 444 214 93 104 chr5 104299396 104299578 -98785954 + MER5A DNA MER1_type 1 180 -9 1206 174 90 41 chr5 104299684 104300028 -98785504 + MLT1A1 LTR MaLR 5 365 0 219 321 167 6 chr5 104300999 104301167 -98784365 - L2 LINE L2 -407 2907 2713 195 42 0 0 chr5 104301562 104301586 -98783946 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 216 0 0 0 chr5 104301585 104301609 -98783923 + (CA)n Simple_repeat Simple_repeat 2 25 0 1154 351 28 36 chr5 104302096 104302923 -98782609 + HERVL LTR ERVL 4522 5341 -313 925 116 49 18 chr5 104303090 104303254 -98782278 - THE1C LTR MaLR 0 375 207 246 254 164 9 chr5 104303629 104303739 -98781793 - L2 LINE L2 -1272 2042 1916 943 321 109 56 chr5 104304430 104305728 -98779804 - L2 LINE L2 0 3313 1946 291 294 21 84 chr5 104305736 104305879 -98779653 + L2 LINE L2 3178 3311 -2 2268 97 0 3 chr5 104308022 104308312 -98777220 + AluSx SINE Alu 1 289 -23 284 303 26 13 chr5 104308327 104308479 -98777053 - L1ME4a LINE L1 -14 6107 5954 1087 196 128 45 chr5 104308630 104308967 -98776565 - MLT1A1 LTR MaLR 0 365 1 390 352 82 17 chr5 104309130 104309363 -98776169 + MIR SINE MIR 9 256 -6 610 303 56 17 chr5 104309391 104309725 -98775807 - L1ME4a LINE L1 -238 5883 5536 237 261 0 0 chr5 104310254 104310319 -98775213 + L1ME LINE L1 5629 5693 -428 1967 125 3 47 chr5 104311391 104311712 -98773820 - AluSx SINE Alu -5 307 1 41 21 0 0 chr5 104312126 104312174 -98773358 + AT_rich Low_complexity Low_complexity 1 48 0 445 314 160 69 chr5 104312812 104313579 -98771953 - L2 LINE L2 -473 2841 2005 634 303 61 13 chr5 104314772 104315000 -98770532 + MIR SINE MIR 24 262 0 195 320 72 10 chr5 104316099 104316196 -98769336 + L2 LINE L2 3193 3295 -18 24 32 0 0 chr5 104316970 104317001 -98768531 + AT_rich Low_complexity Low_complexity 1 31 0 2600 170 37 58 chr5 104317036 104317659 -98767873 - L1MB7 LINE L1 -11 6173 5564 29 0 0 0 chr5 104318120 104318149 -98767383 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 104321596 104321636 -98763896 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr5 104321852 104321886 -98763646 + AT_rich Low_complexity Low_complexity 1 34 0 204 40 0 0 chr5 104322290 104322315 -98763217 + (A)n Simple_repeat Simple_repeat 1 25 0 2135 65 3 62 chr5 104324680 104324987 -98760545 + AluY SINE Alu 18 306 -5 2220 110 0 3 chr5 104327396 104327697 -98757835 - AluSx SINE Alu -12 300 1 2349 71 3 3 chr5 104330689 104330998 -98754534 + AluY SINE Alu 1 309 -2 24 32 0 0 chr5 104331981 104332012 -98753520 + AT_rich Low_complexity Low_complexity 1 31 0 251 349 32 32 chr5 104332656 104332782 -98752750 + MIR3 SINE MIR 81 206 -2 2178 82 0 3 chr5 104333047 104333329 -98752203 + AluSx SINE Alu 17 297 -15 2135 112 0 3 chr5 104333751 104334065 -98751467 + AluSx SINE Alu 1 313 0 783 266 58 45 chr5 104334413 104334931 -98750601 - LTR33A LTR ERVL 0 523 37 288 0 0 0 chr5 104336677 104336709 -98748823 + (CA)n Simple_repeat Simple_repeat 1 32 0 6557 125 29 4 chr5 104337153 104338276 -98747256 - L1MC2 LINE L1 -7 6337 5188 405 286 69 26 chr5 104338282 104338471 -98747061 + L1MB3 LINE L1 5607 5803 -2005 21 57 0 0 chr5 104339266 104339301 -98746231 + AT_rich Low_complexity Low_complexity 1 35 0 1073 121 65 0 chr5 104341151 104341350 -98744182 + L1MB3 LINE L1 5972 6183 0 280 244 58 129 chr5 104341358 104341583 -98743949 + L1ME3A LINE L1 5953 6161 -9 266 310 86 52 chr5 104341712 104341886 -98743646 + MIR SINE MIR 29 208 -54 1989 163 98 33 chr5 104341980 104342440 -98743092 - LTR2B LTR ERV1 0 490 1 10050 189 62 72 chr5 104342651 104347247 -98738285 + L1PB1 LINE L1 91 4734 -2133 944 109 0 0 chr5 104347247 104347375 -98738157 - AluSp/q SINE Alu -12 301 174 10050 189 62 72 chr5 104347375 104347694 -98737838 + L1PB1 LINE L1 4734 5055 -1812 180 0 0 0 chr5 104347694 104347714 -98737818 + (CAA)n Simple_repeat Simple_repeat 2 21 0 10050 189 62 72 chr5 104347714 104349446 -98736086 + L1PB1 LINE L1 5055 6867 0 28 29 0 0 chr5 104350737 104350772 -98734760 + AT_rich Low_complexity Low_complexity 1 35 0 5141 110 21 18 chr5 104351164 104351936 -98733596 - MER4E LTR ERV1 -5 774 1 365 241 213 0 chr5 104352310 104352418 -98733114 - MER5A DNA MER1_type 0 189 59 2444 49 3 16 chr5 104352688 104352992 -98732540 + AluY SINE Alu 1 300 -11 239 256 70 35 chr5 104353263 104353349 -98732183 + L2 LINE L2 3137 3225 -47 1389 172 95 26 chr5 104353494 104353767 -98731765 - AluJo SINE Alu -18 294 3 294 340 50 0 chr5 104354601 104354701 -98730831 - L2 LINE L2 -32 3240 3136 4086 104 44 10 chr5 104356413 104357027 -98728505 - MER41B LTR ERV1 0 635 1 233 325 12 24 chr5 104357422 104357505 -98728027 + MER117 DNA MER1_type 115 196 -1 194 320 186 13 chr5 104357594 104357750 -98727782 - MIR SINE MIR -7 201 19 795 167 0 8 chr5 104357767 104357899 -98727633 - FLAM_C SINE Alu -2 131 1 609 229 59 35 chr5 104358061 104358231 -98727301 + MER5B DNA MER1_type 4 177 -1 2302 97 0 3 chr5 104360354 104360664 -98724868 + AluSc SINE Alu 1 309 0 21 0 0 0 chr5 104361845 104361866 -98723666 + AT_rich Low_complexity Low_complexity 1 21 0 287 289 56 0 chr5 104362107 104362197 -98723335 - MIR SINE MIR -2 260 166 287 322 13 59 chr5 104362235 104362387 -98723145 - MIR3 SINE MIR -27 181 37 1463 221 129 25 chr5 104363155 104363667 -98721865 + L1MC4 LINE L1 7476 8040 -2 1243 147 10 0 chr5 104365648 104365695 -98719837 + AluJb SINE Alu 85 130 -177 207 0 0 0 chr5 104365695 104365718 -98719814 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1243 147 10 0 chr5 104365718 104365891 -98719641 + AluJb SINE Alu 130 307 0 1110 128 6 0 chr5 104365892 104366056 -98719476 - AluSq SINE Alu -68 245 81 22 35 0 0 chr5 104366259 104366288 -98719244 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr5 104366371 104366421 -98719111 + AT_rich Low_complexity Low_complexity 1 50 0 454 218 83 32 chr5 104366581 104366737 -98718795 - MER103 DNA DNA -1 165 2 300 326 43 28 chr5 104367084 104367225 -98718307 - MER5A DNA MER1_type -3 186 44 * 420 328 8 16 chr5 104367125 104367250 -98718282 + MER5A DNA MER1_type 59 182 -7 2338 109 0 6 chr5 104367419 104367731 -98717801 + AluSx SINE Alu 1 310 -2 266 376 46 0 chr5 104367968 104368077 -98717455 + L2 LINE L2 3158 3271 -1 218 206 14 0 chr5 104368486 104368559 -98716973 + (TA)n Simple_repeat Simple_repeat 1 74 0 237 170 0 38 chr5 104369654 104369707 -98715825 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 495 269 17 0 chr5 104370012 104370131 -98715401 + MIR SINE MIR 4 124 -138 266 309 60 129 chr5 104370199 104370416 -98715116 + L2 LINE L2 3027 3228 -44 2278 83 0 3 chr5 104371304 104371604 -98713928 - AluY SINE Alu -12 299 1 216 0 0 0 chr5 104372131 104372155 -98713377 + (T)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr5 104372709 104372733 -98712799 + AT_rich Low_complexity Low_complexity 1 24 0 1272 221 75 16 chr5 104373930 104374251 -98711281 + MER58B DNA MER1_type 2 341 0 2355 155 0 75 chr5 104374362 104374840 -98710692 + LTR32 LTR ERVL 16 457 -14 305 229 0 0 chr5 104375314 104375375 -98710157 - MIR SINE MIR -139 123 63 284 44 0 44 chr5 104375457 104375502 -98710030 + MADE1 DNA Mariner 38 80 0 806 234 30 0 chr5 104375528 104375695 -98709837 - MER5A DNA MER1_type -9 180 9 203 362 134 13 chr5 104375829 104376053 -98709479 + L2 LINE L2 2619 2869 -445 515 319 142 50 chr5 104377563 104378520 -98707012 - L2 LINE L2 -5 3267 2217 1785 106 87 4 chr5 104378605 104378869 -98706663 - AluSq SINE Alu -24 289 4 438 279 64 35 chr5 104379153 104379325 -98706207 - MIR SINE MIR -58 204 28 247 240 90 20 chr5 104379540 104379640 -98705892 + L1MC4a LINE L1 5539 5645 -476 241 196 54 134 chr5 104379673 104379897 -98705635 + L1MC4a LINE L1 5722 5927 -1881 230 271 0 0 chr5 104379891 104379950 -98705582 + L1ME4a LINE L1 5975 6033 -88 * 198 103 0 0 chr5 104380005 104380034 -98705498 + (CATA)n Simple_repeat Simple_repeat 3 31 0 288 267 84 21 chr5 104380152 104380343 -98705189 + L1ME4a LINE L1 5769 5971 -150 1741 113 0 0 chr5 104380643 104380872 -98704660 + AluSq SINE Alu 1 229 -84 23 0 0 0 chr5 104380903 104380926 -98704606 + AT_rich Low_complexity Low_complexity 1 23 0 1875 151 13 45 chr5 104383138 104383515 -98702017 + MLT1A1 LTR MaLR 1 365 0 2285 98 3 7 chr5 104383547 104383854 -98701678 + AluSp SINE Alu 1 306 -7 2188 98 0 3 chr5 104383914 104384199 -98701333 + AluSq SINE Alu 1 284 -29 875 146 8 0 chr5 104384690 104384820 -98700712 + AluJo/FLAM SINE Alu 3 133 -169 1910 107 14 14 chr5 104384822 104385126 -98700406 + AluSx SINE Alu 1 304 0 22 35 0 0 chr5 104385394 104385423 -98700109 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 104385994 104386018 -98699514 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 104386481 104386503 -98699029 + AT_rich Low_complexity Low_complexity 1 22 0 288 277 0 0 chr5 104386780 104386845 -98698687 + MIR SINE MIR 87 151 -111 213 267 0 0 chr5 104387117 104387162 -98698370 - L3 LINE CR1 -27 1550 1506 243 264 28 28 chr5 104387170 104387242 -98698290 - L3 LINE CR1 -308 1269 1198 2360 91 0 0 chr5 104387718 104388016 -98697516 + AluSx SINE Alu 1 298 -14 365 129 14 0 chr5 104388513 104388583 -98696949 + (CATAG)n Simple_repeat Simple_repeat 3 73 0 2344 44 40 3 chr5 104388730 104389026 -98696506 + AluY SINE Alu 1 307 -4 2229 97 3 3 chr5 104389029 104389327 -98696205 + AluSp SINE Alu 1 298 -15 415 257 139 0 chr5 104389454 104389598 -98695934 + MIR SINE MIR 73 236 -26 278 50 25 0 chr5 104389611 104389651 -98695881 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 215 169 14 0 chr5 104389889 104389960 -98695572 + (TTTAA)n Simple_repeat Simple_repeat 1 72 0 697 216 82 26 chr5 104390060 104390254 -98695278 + MIR SINE MIR 2 206 -56 234 326 69 56 chr5 104390704 104390848 -98694684 + MIR SINE MIR 6 151 -111 185 289 0 0 chr5 104390863 104390908 -98694624 + L2 LINE L2 3216 3260 -12 341 321 7 0 chr5 104392031 104392168 -98693364 + (TA)n Simple_repeat Simple_repeat 1 138 0 283 356 32 19 chr5 104394249 104394462 -98691070 - MIR SINE MIR -32 230 16 30 59 0 0 chr5 104395922 104395973 -98689559 + AT_rich Low_complexity Low_complexity 1 51 0 305 204 51 31 chr5 104396884 104396982 -98688550 + L1ME4a LINE L1 5966 6065 -56 304 291 54 61 chr5 104398922 104399070 -98686462 - L2 LINE L2 -3 3310 3164 219 114 0 0 chr5 104399362 104399397 -98686135 + (TATG)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr5 104399795 104399819 -98685713 + AT_rich Low_complexity Low_complexity 1 24 0 27 73 0 0 chr5 104400162 104400217 -98685315 + AT_rich Low_complexity Low_complexity 1 55 0 896 90 4 57 chr5 104401411 104401693 -98683839 + (TA)n Simple_repeat Simple_repeat 1 266 0 295 189 19 0 chr5 104402087 104402140 -98683392 - L2 LINE L2 -30 3242 3189 2169 114 7 7 chr5 104402199 104402505 -98683027 + AluSq SINE Alu 1 306 -7 767 174 0 0 chr5 104402544 104402659 -98682873 - FLAM_A SINE Alu -18 115 1 192 40 0 0 chr5 104404140 104404165 -98681367 + (TG)n Simple_repeat Simple_repeat 2 26 0 1376 182 20 30 chr5 104404365 104404661 -98680871 - AluJb SINE Alu -19 293 1 273 204 21 21 chr5 104404677 104404770 -98680762 + CT-rich Low_complexity Low_complexity 3 95 0 1296 169 50 33 chr5 104404778 104405020 -98680512 - AluJo SINE Alu -43 269 24 2550 44 0 0 chr5 104405189 104405486 -98680046 - AluY SINE Alu -14 297 1 2358 94 0 0 chr5 104405486 104405783 -98679749 - AluSg SINE Alu -13 297 1 30 0 0 0 chr5 104406756 104406786 -98678746 + AT_rich Low_complexity Low_complexity 1 30 0 3570 145 8 60 chr5 104407319 104407436 -98678096 + MER67C LTR ERV1 4 126 -584 2072 113 58 0 chr5 104407436 104407729 -98677803 + AluSq SINE Alu 1 310 -3 3570 145 8 60 chr5 104407729 104408357 -98677175 + MER67C LTR ERV1 126 710 0 2381 80 10 0 chr5 104409579 104409881 -98675651 + AluY SINE Alu 1 305 -6 813 257 66 56 chr5 104410234 104410553 -98674979 - L2 LINE L2 0 3313 2992 243 190 21 144 chr5 104410601 104410795 -98674737 - MLT1J LTR MaLR -284 162 2 3956 77 45 0 chr5 104411128 104411658 -98673874 + MER41A LTR ERV1 1 554 0 4105 125 36 3 chr5 104411744 104412346 -98673186 + MER41A-int LTR ERV1 1 622 -5324 * 12707 119 27 23 chr5 104412333 104414734 -98670798 + MER41A-int LTR ERV1 1080 4000 -1015 2265 121 0 0 chr5 104414734 104415041 -98670491 + AluSx SINE Alu 1 307 -5 12707 119 27 23 chr5 104415041 104415369 -98670163 + MER41A-int LTR ERV1 4000 4325 -690 1991 164 3 0 chr5 104415371 104415682 -98669850 + AluSx SINE Alu 1 312 0 1197 55 0 0 chr5 104415762 104415907 -98669625 + MER41-int LTR ERV1 5776 5920 -26 3071 69 5 0 chr5 104415958 104416351 -98669181 + MER41A LTR ERV1 159 553 -1 334 275 0 0 chr5 104416833 104416902 -98668630 - HAL1 LINE L1 -2426 81 13 20956 157 35 21 chr5 104416994 104418727 -98666805 + L1M1 LINE L1 14 1722 -5843 225 0 0 0 chr5 104418727 104418752 -98666780 + (GA)n Simple_repeat Simple_repeat 2 26 0 20956 157 35 21 chr5 104418752 104419666 -98665866 + L1M1 LINE L1 1722 2622 -4943 2137 116 0 3 chr5 104419666 104419960 -98665572 + AluSg SINE Alu 2 294 -16 20956 157 35 21 chr5 104419960 104420950 -98664582 + L1M1 LINE L1 2622 3597 -3968 207 0 0 0 chr5 104420950 104420973 -98664559 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 20956 157 35 21 chr5 104420973 104421644 -98663888 + L1M1 LINE L1 3597 4393 -3172 2173 109 0 16 chr5 104421644 104421956 -98663576 + AluSx SINE Alu 6 312 0 20956 157 35 21 chr5 104421956 104422208 -98663324 + L1M1 LINE L1 4393 4640 -2925 1432 93 0 0 chr5 104422206 104422411 -98663121 + L1MA3 LINE L1 5743 5947 -358 * 732 264 0 0 chr5 104422409 104422557 -98662975 + L1M2c LINE L1 710 857 -5992 * 5215 211 48 10 chr5 104422560 104422777 -98662755 + L1M2c LINE L1 1501 1708 -5140 2298 73 3 0 chr5 104422777 104423066 -98662466 + AluY SINE Alu 8 297 -14 5215 211 48 10 chr5 104423066 104424921 -98660611 + L1M2c LINE L1 1708 3646 -3202 2254 160 46 2 chr5 104424921 104425358 -98660174 + L1MA5A LINE L1 5838 6293 -4 2316 98 0 9 chr5 104425366 104425682 -98659850 + AluSq SINE Alu 1 313 0 2152 104 6 22 chr5 104425691 104426009 -98659523 + AluSq SINE Alu 1 313 0 181 265 82 0 chr5 104426017 104426066 -98659466 + MIR3 SINE MIR 138 190 -18 691 228 156 9 chr5 104426872 104426926 -98658606 - MIR SINE MIR -1 261 216 279 0 0 0 chr5 104426926 104426957 -98658575 + (TA)n Simple_repeat Simple_repeat 2 32 0 691 228 156 9 chr5 104426957 104427126 -98658406 - MIR SINE MIR -46 216 5 1070 170 6 0 chr5 104428552 104428723 -98656809 + FAM SINE Alu 1 172 -3 365 263 159 52 chr5 104429151 104429383 -98656149 + L1ME4a LINE L1 5772 6028 -93 4884 112 20 32 chr5 104429499 104429879 -98655653 - MER4E LTR ERV1 0 779 396 2088 136 0 3 chr5 104429879 104430180 -98655352 - AluSx SINE Alu -12 300 1 4884 112 20 32 chr5 104430180 104430587 -98654945 - MER4E LTR ERV1 -383 396 1 2222 122 0 3 chr5 104430871 104431182 -98654350 + AluSg SINE Alu 1 310 0 796 246 0 12 chr5 104431327 104431498 -98654034 - FRAM SINE Alu -8 168 1 414 117 0 0 chr5 104432205 104432265 -98653267 + MSTC LTR MaLR 369 428 0 313 180 101 0 chr5 104432564 104432653 -98652879 + MER112 DNA MER1_type 74 171 -89 371 193 64 46 chr5 104433000 104433109 -98652423 + MER5A DNA MER1_type 1 111 -78 651 290 104 14 chr5 104433779 104434000 -98651532 - MIR SINE MIR 0 262 22 217 312 26 26 chr5 104434297 104434374 -98651158 + MER5A DNA MER1_type 2 78 -111 362 257 0 0 chr5 104434379 104434449 -98651083 - MER5A DNA MER1_type -111 78 9 557 249 129 76 chr5 104434456 104434493 -98651039 + MIR SINE MIR 16 50 -212 2141 102 3 7 chr5 104434493 104434786 -98650746 - AluSg SINE Alu -16 294 3 557 249 129 76 chr5 104434786 104434973 -98650559 + MIR SINE MIR 50 252 -10 2791 16 0 0 chr5 104436163 104436474 -98649058 + AluYa5 SINE Alu 1 311 0 1991 89 44 4 chr5 104437806 104437972 -98647560 - AluSg SINE Alu -15 295 112 186 71 0 0 chr5 104437972 104438000 -98647532 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1991 89 44 4 chr5 104438000 104438103 -98647429 - AluSg SINE Alu -198 112 15 183 349 223 17 chr5 104438541 104438779 -98646753 + L2 LINE L2 1774 2060 -1254 1565 171 52 11 chr5 104438866 104439152 -98646380 - AluJb SINE Alu -14 298 1 21 36 0 0 chr5 104439158 104439186 -98646346 + AT_rich Low_complexity Low_complexity 1 28 0 6045 80 6 3 chr5 104439269 104440046 -98645486 + LTR17 LTR ERV1 1 780 0 1208 197 91 42 chr5 104440482 104440909 -98644623 + MER39 LTR ERV1 260 707 0 2270 132 118 2 chr5 104441015 104441440 -98644092 + LTR24C LTR ERV1 162 635 0 184 340 20 10 chr5 104441441 104441541 -98643991 + L2 LINE L2 2211 2311 -1003 2489 152 113 8 chr5 104441570 104442090 -98643442 + LTR49 LTR ERV1 1 575 -20 561 177 91 91 chr5 104442223 104442398 -98643134 + MER58C DNA MER1_type 41 215 0 182 114 0 29 chr5 104442593 104442628 -98642904 + (CA)n Simple_repeat Simple_repeat 2 35 0 1815 209 100 83 chr5 104442628 104443337 -98642195 + MER21B LTR ERV1 21 741 -122 222 298 36 12 chr5 104443827 104443911 -98641621 + MIR3 SINE MIR 121 206 -2 21 0 0 0 chr5 104444651 104444672 -98640860 + AT_rich Low_complexity Low_complexity 1 21 0 2256 73 0 54 chr5 104444810 104445123 -98640409 + AluY SINE Alu 1 296 -15 2005 113 7 14 chr5 104445427 104445719 -98639813 - AluSq SINE Alu -7 306 17 1080 129 53 6 chr5 104445964 104446135 -98639397 - AluJo SINE Alu -11 301 123 295 57 0 0 chr5 104446207 104446242 -98639290 + (TG)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr5 104446292 104446335 -98639197 + (TG)n Simple_repeat Simple_repeat 1 43 0 636 211 0 0 chr5 104446338 104446452 -98639080 - AluJo SINE Alu -186 116 3 661 125 71 0 chr5 104446460 104446572 -98638960 - MER57A LTR ERV1 -275 128 9 434 148 49 25 chr5 104446628 104446750 -98638782 + T-rich Low_complexity Low_complexity 5 129 0 * 597 71 53 0 chr5 104446725 104446838 -98638694 + CT-rich Low_complexity Low_complexity 2 120 0 769 164 8 15 chr5 104446849 104446983 -98638549 - AluJo SINE Alu -169 133 1 202 250 66 66 chr5 104446983 104447059 -98638473 + L2 LINE L2 2636 2711 -603 2119 118 7 0 chr5 104447096 104447392 -98638140 - AluSq SINE Alu -15 298 1 1856 127 11 0 chr5 104447500 104447940 -98637592 - L1MA7 LINE L1 -2 6289 5739 23 54 0 0 chr5 104448209 104448246 -98637286 + AT_rich Low_complexity Low_complexity 1 37 0 2085 225 44 21 chr5 104448439 104449070 -98636462 + MER114 LTR ERV 3 648 0 34 42 0 0 chr5 104453361 104453409 -98632123 + AT_rich Low_complexity Low_complexity 1 48 0 34329 100 16 11 chr5 104454748 104460876 -98624656 + L1PA6 LINE L1 1 6153 -1 459 239 0 54 chr5 104460888 104461018 -98624514 - MER5A DNA MER1_type -50 139 17 446 250 88 67 chr5 104461075 104461359 -98624173 - L1M4 LINE L1 -1458 4688 4399 2216 117 0 16 chr5 104461693 104462001 -98623531 - AluSx SINE Alu -9 303 1 2564 111 11 3 chr5 104463405 104463766 -98621766 - THE1B LTR MaLR 0 364 1 2304 96 3 0 chr5 104463766 104464090 -98621442 - THE1B-int LTR MaLR 0 1580 1256 5135 159 19 4 chr5 104466600 104467709 -98617823 - THE1B-int LTR MaLR -312 1268 192 * 5677 187 16 4 chr5 104467704 104468917 -98616615 - L1P LINE L1 -897 5249 4022 786 219 49 21 chr5 104468917 104469245 -98616287 + L1ME LINE L1 2676 3012 -3134 2881 137 6 28 chr5 104469322 104469339 -98616193 - L1M2 LINE L1 -499 5801 5785 6063 128 57 42 chr5 104469339 104470551 -98614981 - Tigger3b DNA MER2_type -1 1230 1 2881 137 6 28 chr5 104470551 104471079 -98614453 - L1M2 LINE L1 -515 5785 5268 1270 229 68 5 chr5 104471082 104471492 -98614040 + L1ME LINE L1 4851 5286 -860 217 229 57 29 chr5 104471535 104471605 -98613927 - L2 LINE L2 -556 2758 2687 764 171 55 0 chr5 104471664 104471828 -98613704 + L1ME LINE L1 5275 5447 -727 272 149 15 45 chr5 104471830 104471897 -98613635 - L1M4 LINE L1 -1538 4608 4544 * 486 139 30 13 chr5 104471886 104471992 -98613540 + L1ME LINE L1 5445 5550 -571 259 212 55 27 chr5 104472030 104472176 -98613356 + (TTATA)n Simple_repeat Simple_repeat 4 153 0 233 159 45 0 chr5 104472364 104472408 -98613124 - MSTB LTR MaLR 0 426 381 17481 197 18 22 chr5 104472409 104473775 -98611757 + L1PA12 LINE L1 931 2302 -5282 2409 80 0 7 chr5 104473775 104474074 -98611458 + AluY SINE Alu 1 297 -14 17481 197 18 22 chr5 104474074 104474158 -98611374 + L1PA12 LINE L1 2302 2385 -5199 1800 104 47 161 chr5 104474158 104474539 -98610993 + THE1C LTR MaLR 1 331 -44 2231 122 0 0 chr5 104474539 104474834 -98610698 - AluSg SINE Alu -15 295 1 1800 104 47 161 chr5 104474834 104474875 -98610657 + THE1C LTR MaLR 331 375 0 17481 197 18 22 chr5 104474875 104475987 -98609545 + L1PA12 LINE L1 2385 3501 -4083 1955 128 0 25 chr5 104475987 104476304 -98609228 + AluSx SINE Alu 11 320 0 17481 197 18 22 chr5 104476304 104478344 -98607188 + L1PA12 LINE L1 3501 6304 -1280 626 186 21 0 chr5 104478344 104478489 -98607043 + L1PA12 LINE L1 6617 6764 -820 1191 192 102 0 chr5 104478489 104478744 -98606788 - MSTB LTR MaLR -75 351 71 198 292 73 21 chr5 104478773 104478869 -98606663 + L2 LINE L2 3182 3282 -31 531 275 22 7 chr5 104478888 104479026 -98606506 + Charlie1a DNA MER1_type 8 147 -1308 1725 149 52 0 chr5 104479048 104479351 -98606181 + AluSx SINE Alu 1 317 0 1769 211 37 49 chr5 104479356 104479867 -98605665 - MLT1D LTR MaLR 0 505 1 236 198 136 25 chr5 104479867 104479948 -98605584 + Charlie1a DNA MER1_type 212 301 -1154 980 179 0 0 chr5 104479949 104480134 -98605398 - AluSx SINE Alu 0 312 135 370 101 29 0 chr5 104480153 104480222 -98605310 + (TA)n Simple_repeat Simple_repeat 1 71 0 774 159 0 8 chr5 104480222 104480348 -98605184 - AluSx SINE Alu -188 125 1 3611 167 52 31 chr5 104480395 104481288 -98604244 + Charlie1a DNA MER1_type 545 1455 0 855 143 0 0 chr5 104481427 104481553 -98603979 + AluSg/x SINE Alu 174 299 -11 2257 98 9 29 chr5 104481858 104482174 -98603358 + AluSx SINE Alu 1 310 -2 210 143 0 0 chr5 104482276 104482311 -98603221 + (A)n Simple_repeat Simple_repeat 1 35 0 2184 102 10 13 chr5 104482323 104482628 -98602904 + AluSx SINE Alu 1 304 -8 183 42 0 0 chr5 104482629 104482653 -98602879 + (TA)n Simple_repeat Simple_repeat 1 24 0 244 36 0 0 chr5 104483477 104483505 -98602027 - AluY SINE Alu -256 44 17 1738 163 23 20 chr5 104483505 104483811 -98601721 + AluJo SINE Alu 1 307 -5 826 280 37 26 chr5 104484185 104484456 -98601076 + LTR16B LTR ERVL 189 462 -2 635 225 91 67 chr5 104484462 104484671 -98600861 - MIR SINE MIR -25 237 24 299 265 89 12 chr5 104484776 104484898 -98600634 - MIR SINE MIR -64 144 42 1796 142 3 20 chr5 104485044 104485339 -98600193 - AluSx SINE Alu -22 290 1 482 304 81 25 chr5 104485420 104485581 -98599951 + MER91A DNA MER1_type 21 190 -6 259 192 39 0 chr5 104485606 104485658 -98599874 + MER91A DNA MER1_type 131 184 -6 334 331 45 7 chr5 104485757 104485911 -98599621 + L1ME4a LINE L1 5574 5733 -388 638 270 132 16 chr5 104485916 104486227 -98599305 + L1ME4a LINE L1 5773 6119 -2 361 293 158 6 chr5 104486744 104486908 -98598624 - MIR SINE MIR 0 262 74 332 252 0 58 chr5 104487086 104487189 -98598343 - MIR3 SINE MIR 0 208 112 523 279 58 6 chr5 104487240 104487412 -98598120 + MIR SINE MIR 7 187 -75 21 0 0 0 chr5 104487560 104487581 -98597951 + AT_rich Low_complexity Low_complexity 1 21 0 457 200 0 0 chr5 104487667 104487747 -98597785 - AluJ/FRAM SINE Alu -16 296 217 346 257 43 0 chr5 104487805 104487875 -98597657 - AluJ/FLAM SINE Alu -228 74 2 391 292 0 0 chr5 104487876 104487965 -98597567 - L2 LINE L2 -18 3295 3207 201 74 0 0 chr5 104488371 104488398 -98597134 + (CA)n Simple_repeat Simple_repeat 2 28 0 365 336 51 37 chr5 104488763 104488980 -98596552 + MIR SINE MIR 5 224 -38 2097 88 21 3 chr5 104491729 104492012 -98593520 - AluSx SINE Alu -15 297 10 24 32 0 0 chr5 104492900 104492931 -98592601 + AT_rich Low_complexity Low_complexity 1 31 0 446 303 97 12 chr5 104493101 104493266 -98592266 + MIR SINE MIR 26 204 -58 249 33 0 0 chr5 104493725 104493755 -98591777 + (CA)n Simple_repeat Simple_repeat 2 31 0 283 194 71 31 chr5 104494406 104494504 -98591028 + L1ME4a LINE L1 5995 6096 -25 28 71 0 0 chr5 104494557 104494613 -98590919 + AT_rich Low_complexity Low_complexity 1 56 0 2335 66 7 26 chr5 104496746 104497050 -98588482 + AluY SINE Alu 1 298 -13 2401 87 3 6 chr5 104497211 104497523 -98588009 - AluSx SINE Alu -1 311 1 2401 67 3 0 chr5 104497813 104498111 -98587421 + AluY SINE Alu 1 299 -12 315 0 0 0 chr5 104499426 104499461 -98586071 + (TA)n Simple_repeat Simple_repeat 2 36 0 2252 74 10 14 chr5 104499673 104499970 -98585562 - AluSq SINE Alu -17 296 1 2134 111 24 0 chr5 104499978 104500276 -98585256 - AluSg SINE Alu -5 305 1 24 32 0 0 chr5 104501121 104501152 -98584380 + AT_rich Low_complexity Low_complexity 1 31 0 861 160 0 0 chr5 104501702 104501833 -98583699 + AluJo SINE Alu 1 131 -171 21 57 0 0 chr5 104502037 104502072 -98583460 + AT_rich Low_complexity Low_complexity 1 35 0 1648 257 30 26 chr5 104503102 104503671 -98581861 - L1ME2 LINE L1 -16 6352 5782 710 169 8 16 chr5 104503672 104503796 -98581736 + AluJo SINE Alu 1 123 -189 246 62 0 0 chr5 104503796 104503828 -98581704 + (T)n Simple_repeat Simple_repeat 1 32 0 567 171 9 9 chr5 104503835 104503940 -98581592 + AluJo SINE Alu 131 235 -77 291 156 31 31 chr5 104503944 104504008 -98581524 - L1ME2 LINE L1 -588 5780 5717 1640 188 129 11 chr5 104504008 104504456 -98581076 - L1ME2 LINE L1 -1263 5087 4587 484 207 33 80 chr5 104504461 104504536 -98580996 - L1ME2 LINE L1 -2220 4130 4053 2104 92 41 3 chr5 104504536 104504831 -98580701 - AluY SINE Alu -5 306 1 2174 101 13 7 chr5 104504831 104505129 -98580403 - AluSp SINE Alu -13 300 1 484 207 33 80 chr5 104505129 104505265 -98580267 - L1ME2 LINE L1 -2295 4055 3928 * 1111 249 67 6 chr5 104505263 104505624 -98579908 + L1M4 LINE L1 3986 4368 -1778 854 208 119 16 chr5 104505634 104505946 -98579586 - L1ME2 LINE L1 -2947 3403 3060 239 288 12 0 chr5 104505984 104506064 -98579468 - L1ME2 LINE L1 -3621 2729 2649 1710 164 63 30 chr5 104506126 104507030 -98578502 - L1MA8 LINE L1 -262 6029 5002 3613 251 68 53 chr5 104507035 104508553 -98576979 - L1ME2 LINE L1 -3784 2566 1334 2132 142 0 7 chr5 104508553 104508862 -98576670 - AluSx SINE Alu -5 307 1 3613 251 68 53 chr5 104508862 104509608 -98575924 - L1ME2 LINE L1 -5016 1334 601 1858 261 57 58 chr5 104509694 104510011 -98575521 - L1M3b LINE L1 -5541 740 423 2336 81 7 7 chr5 104510011 104510320 -98575212 - AluY SINE Alu -2 309 1 1858 261 57 58 chr5 104510320 104510620 -98574912 - L1M3b LINE L1 -5858 423 124 705 260 143 53 chr5 104510634 104510880 -98574652 - L1MCc LINE L1 -3935 3187 2965 2196 123 3 0 chr5 104510880 104511182 -98574350 - AluSx SINE Alu -9 303 1 705 260 143 53 chr5 104511182 104511389 -98574143 - L1MCc LINE L1 -4157 2965 2693 1836 118 255 11 chr5 104511389 104511746 -98573786 - Tigger2 DNA MER2_type 0 2718 2275 1170 257 87 35 chr5 104511764 104512997 -98572535 - L1MCc LINE L1 -4420 2702 1182 765 191 337 28 chr5 104513035 104513323 -98572209 + MSTD LTR MaLR 20 396 0 981 309 70 42 chr5 104513323 104513851 -98571681 - L1MCc LINE L1 -5237 1186 644 1993 282 36 10 chr5 104513908 104514521 -98571011 - L1MCc LINE L1 -5778 645 17 21 36 0 0 chr5 104514601 104514629 -98570903 + AT_rich Low_complexity Low_complexity 1 28 0 652 323 24 110 chr5 104515810 104516770 -98568762 + L2 LINE L2 2392 3262 -10 713 269 119 40 chr5 104516907 104517327 -98568205 + MLT1L LTR MaLR 161 613 -2 1490 171 40 11 chr5 104517816 104518090 -98567442 + AluJo SINE Alu 1 282 -30 203 343 15 15 chr5 104518200 104518267 -98567265 - L2 LINE L2 -13 3300 3234 260 292 123 39 chr5 104518543 104518697 -98566835 + MIR SINE MIR 20 186 -76 572 285 43 24 chr5 104518717 104518924 -98566608 - MIR SINE MIR -10 252 42 2152 117 0 0 chr5 104520332 104520622 -98564910 - AluSg SINE Alu -20 290 1 21 36 0 0 chr5 104521804 104521832 -98563700 + AT_rich Low_complexity Low_complexity 1 28 0 2240 61 0 7 chr5 104522205 104522482 -98563050 - AluY SINE Alu -13 298 24 2005 149 38 20 chr5 104522826 104523168 -98562364 + MER7A DNA MER2_type 1 346 0 32 0 0 0 chr5 104523699 104523731 -98561801 + AT_rich Low_complexity Low_complexity 1 32 0 2291 105 0 10 chr5 104523841 104524147 -98561385 - AluSc SINE Alu -6 303 1 709 196 15 144 chr5 104524354 104524681 -98560851 - L1ME LINE L1 -370 5800 5516 2337 98 3 0 chr5 104524688 104524995 -98560537 - AluSp SINE Alu -5 308 1 1702 175 7 3 chr5 104525727 104526018 -98559514 + AluSq SINE Alu 1 292 -21 192 158 0 0 chr5 104526214 104526252 -98559280 + A-rich Low_complexity Low_complexity 1 38 0 11829 198 45 80 chr5 104526816 104530267 -98555265 - L1 LINE L1 -1032 6176 3141 261 0 0 0 chr5 104530267 104530296 -98555236 + (TTG)n Simple_repeat Simple_repeat 2 30 0 11829 198 45 80 chr5 104530296 104533329 -98552203 - L1 LINE L1 -4067 3141 1 2228 115 0 6 chr5 104533362 104533674 -98551858 - AluSx SINE Alu -2 310 1 203 161 0 0 chr5 104535157 104535188 -98550344 - MIR SINE MIR -112 150 120 2116 115 0 3 chr5 104535200 104535486 -98550046 + AluSx SINE Alu 1 285 -27 1258 167 0 0 chr5 104536151 104536349 -98549183 - AluJo SINE Alu -30 282 85 815 238 6 12 chr5 104536631 104536791 -98548741 + MER8 DNA MER2_type 2 160 -79 192 235 0 0 chr5 104536962 104536996 -98548536 - MIR SINE MIR -112 150 117 363 113 0 0 chr5 104537005 104537058 -98548474 + Alu SINE Alu 1 53 -248 365 174 29 14 chr5 104537124 104537193 -98548339 - Tigger2 DNA MER2_type -2648 70 1 2170 102 0 14 chr5 104537308 104537602 -98547930 + AluSg SINE Alu 1 290 -20 196 256 205 0 chr5 104538290 104538368 -98547164 + L2 LINE L2 2890 2983 -289 1848 152 0 30 chr5 104538481 104538784 -98546748 - AluSx SINE Alu -18 294 1 207 0 0 0 chr5 104538793 104538816 -98546716 + (T)n Simple_repeat Simple_repeat 1 23 0 285 313 61 10 chr5 104538979 104539078 -98546454 - L2 LINE L2 0 3272 3169 187 363 87 56 chr5 104539185 104539507 -98546025 + L2 LINE L2 2525 2856 -458 1704 154 31 7 chr5 104539574 104539882 -98545650 - AluJb SINE Alu 0 312 6 262 212 12 12 chr5 104539894 104539979 -98545553 + CT-rich Low_complexity Low_complexity 1 85 0 1371 160 21 114 chr5 104539986 104540173 -98545359 - AluJo SINE Alu -1 301 157 2104 109 7 13 chr5 104540173 104540475 -98545057 - AluSx SINE Alu -12 300 1 1371 160 21 114 chr5 104540475 104540619 -98544913 - AluJo SINE Alu -145 157 1 199 349 95 0 chr5 104540784 104540847 -98544685 + L2 LINE L2 3200 3268 -4 401 263 51 8 chr5 104541339 104541457 -98544075 - MER3 DNA MER1_type -1 208 86 25 31 0 0 chr5 104542175 104542207 -98543325 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr5 104543196 104543232 -98542300 + AT_rich Low_complexity Low_complexity 1 36 0 263 264 0 0 chr5 104543471 104543543 -98541989 + T-rich Low_complexity Low_complexity 1 72 0 296 275 34 53 chr5 104543645 104543852 -98541680 - L1MEd LINE L1 -3211 2918 2716 243 146 0 0 chr5 104544269 104544310 -98541222 + (TC)n Simple_repeat Simple_repeat 2 42 0 338 304 101 63 chr5 104544361 104544867 -98540665 - L1MEd LINE L1 -5063 1056 532 1659 167 0 53 chr5 104545232 104545555 -98539977 + AluJo SINE Alu 1 306 -6 365 288 90 0 chr5 104546749 104546860 -98538672 - MIR SINE MIR -68 140 20 198 0 0 0 chr5 104547744 104547766 -98537766 + (T)n Simple_repeat Simple_repeat 1 22 0 2490 51 0 0 chr5 104549764 104550059 -98535473 - AluY SINE Alu -16 295 1 24 0 0 0 chr5 104550115 104550139 -98535393 + AT_rich Low_complexity Low_complexity 1 24 0 290 249 239 10 chr5 104550940 104551145 -98534387 - L1ME4a LINE L1 -52 6069 5818 1836 143 10 19 chr5 104551151 104551458 -98534074 + AluJo SINE Alu 3 306 -6 2059 122 3 7 chr5 104552967 104553270 -98532262 - AluSx SINE Alu -10 302 1 2659 22 0 0 chr5 104553336 104553648 -98531884 - L1PA3 LINE L1 0 6155 5844 266 111 22 0 chr5 104553737 104553782 -98531750 + Alu SINE Alu 248 293 -8 271 182 45 15 chr5 104553819 104553885 -98531647 + MER4-int LTR ERV1 1089 1156 -5442 212 338 13 0 chr5 104554591 104554668 -98530864 - L3b LINE CR1 -172 1411 1334 836 224 17 0 chr5 104554692 104554866 -98530666 - MER58A DNA MER1_type -21 203 27 246 327 136 9 chr5 104554867 104555087 -98530445 - L3b LINE CR1 -234 1349 1102 240 263 74 32 chr5 104555145 104555240 -98530292 - L2 LINE L2 -1 3271 3173 185 238 63 32 chr5 104555372 104555435 -98530097 + L3 LINE CR1 1293 1357 -220 2466 72 0 0 chr5 104556256 104556563 -98528969 + AluY SINE Alu 1 307 -4 705 190 172 0 chr5 104556739 104556902 -98528630 - MER20 DNA MER1_type -4 215 25 1310 40 0 0 chr5 104557539 104557689 -98527843 + AluSc SINE Alu 146 295 -14 245 287 19 9 chr5 104557812 104557920 -98527612 + CT-rich Low_complexity Low_complexity 3 111 0 1866 66 93 4 chr5 104558617 104558903 -98526629 - AluY SINE Alu 0 309 1 905 186 0 0 chr5 104559066 104559211 -98526321 + FAM SINE Alu 13 157 -28 1614 179 23 7 chr5 104559254 104559585 -98525947 + AluJo SINE Alu 1 312 0 40 0 0 0 chr5 104559787 104559827 -98525705 + AT_rich Low_complexity Low_complexity 1 40 0 260 27 27 0 chr5 104562761 104562798 -98522734 + (TG)n Simple_repeat Simple_repeat 2 39 0 31 26 0 0 chr5 104563715 104563753 -98521779 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr5 104567443 104567477 -98518055 + AT_rich Low_complexity Low_complexity 1 34 0 2149 149 10 29 chr5 104572190 104572598 -98512934 - L1MA6 LINE L1 -10 6290 5891 24 53 0 0 chr5 104572786 104572824 -98512708 + AT_rich Low_complexity Low_complexity 1 38 0 718 200 25 0 chr5 104572856 104572976 -98512556 + FLAM_A SINE Alu 1 123 -10 189 74 0 0 chr5 104575453 104575480 -98510052 + (T)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 104576412 104576440 -98509092 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 104580966 104580988 -98504544 + AT_rich Low_complexity Low_complexity 1 22 0 230 294 226 0 chr5 104583927 104584029 -98501503 + MIR SINE MIR 22 146 -62 21 0 0 0 chr5 104584819 104584840 -98500692 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 104586014 104586036 -98499496 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 104586173 104586203 -98499329 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr5 104587203 104587229 -98498303 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr5 104588580 104588608 -98496924 + AT_rich Low_complexity Low_complexity 1 28 0 9332 116 22 39 chr5 104589009 104590568 -98494964 + L1PA10 LINE L1 3783 5329 -839 2190 113 0 3 chr5 104590568 104590860 -98494672 - AluSq SINE Alu -22 291 1 9332 116 22 39 chr5 104590860 104591682 -98493850 + L1PA10 LINE L1 5329 6164 -4 2361 75 16 0 chr5 104591687 104591992 -98493540 + AluSp SINE Alu 1 310 -3 363 252 258 26 chr5 104592727 104592878 -98492654 - MIR SINE MIR -67 195 10 185 246 15 0 chr5 104595698 104595763 -98489769 + GA-rich Low_complexity Low_complexity 1 66 0 23 33 0 0 chr5 104595978 104596008 -98489524 + AT_rich Low_complexity Low_complexity 1 30 0 1799 164 17 20 chr5 104596094 104596386 -98489146 - AluJo SINE Alu -21 291 1 320 194 0 129 chr5 104596467 104596560 -98488972 - MER2 DNA MER2_type -259 86 6 543 250 107 36 chr5 104597543 104597739 -98487793 + MIR SINE MIR 51 260 -2 205 294 65 54 chr5 104597882 104597974 -98487558 - MIR SINE MIR -57 205 113 320 232 158 32 chr5 104598537 104598632 -98486900 - MIR SINE MIR -61 147 41 302 317 124 14 chr5 104600389 104600534 -98484998 + MIR SINE MIR 96 256 -6 407 211 0 0 chr5 104600724 104600795 -98484737 - L2 LINE L2 0 3313 3243 610 188 107 148 chr5 104600980 104601412 -98484120 - LTR33A LTR ERVL -19 504 91 749 288 108 67 chr5 104601490 104602012 -98483520 - L2 LINE L2 -339 2975 2421 1798 155 36 0 chr5 104602012 104602290 -98483242 - AluJo SINE Alu -24 288 1 749 288 108 67 chr5 104602290 104602398 -98483134 - L2 LINE L2 -893 2421 2319 270 69 52 0 chr5 104602750 104602808 -98482724 + (CA)n Simple_repeat Simple_repeat 2 62 0 491 33 0 0 chr5 104603089 104603149 -98482383 - MER30B DNA MER1_type -127 63 4 251 236 18 0 chr5 104603227 104603282 -98482250 + MIR SINE MIR 205 260 -2 22 35 0 0 chr5 104603642 104603671 -98481861 + AT_rich Low_complexity Low_complexity 1 29 0 1355 111 69 5 chr5 104604065 104604281 -98481251 - MER30 DNA MER1_type 0 230 1 2207 132 3 40 chr5 104604377 104604756 -98480776 + MLT1A1 LTR MaLR 1 365 0 34 0 0 0 chr5 104604788 104604822 -98480710 + AT_rich Low_complexity Low_complexity 1 34 0 2394 90 0 3 chr5 104605522 104605832 -98479700 + AluSg SINE Alu 1 309 -1 193 293 69 0 chr5 104606292 104606350 -98479182 - L2 LINE L2 -28 3244 3183 1155 181 5 5 chr5 104606388 104606581 -98478951 - AluJo SINE Alu -104 208 16 1084 257 32 35 chr5 104606602 104607007 -98478525 - L1MC4a LINE L1 -1870 5938 5535 1207 206 23 9 chr5 104607198 104607416 -98478116 - AluJb SINE Alu -91 221 1 231 278 63 146 chr5 104607756 104607961 -98477571 + MIR SINE MIR 2 189 -73 1871 148 21 0 chr5 104608048 104608331 -98477201 + AluJb SINE Alu 3 291 -21 321 315 19 19 chr5 104608720 104608828 -98476704 - L2 LINE L2 -19 3294 3187 1077 201 5 14 chr5 104608829 104609043 -98476489 - AluJo SINE Alu -15 297 86 1924 137 0 10 chr5 104609525 104609818 -98475714 - AluSx SINE Alu -22 290 1 236 304 43 43 chr5 104610343 104610458 -98475074 + L2 LINE L2 2941 3055 -217 2255 113 0 10 chr5 104611496 104611807 -98473725 - AluSx SINE Alu -4 308 1 183 167 0 56 chr5 104612723 104612759 -98472773 - L2 LINE L2 -212 3060 3027 698 284 20 5 chr5 104613644 104613848 -98471684 + MIR SINE MIR 49 255 -7 22 0 0 0 chr5 104614036 104614058 -98471474 + AT_rich Low_complexity Low_complexity 1 22 0 800 194 0 0 chr5 104614060 104614194 -98471338 - AluJb SINE Alu -178 134 1 195 274 179 12 chr5 104614687 104614771 -98470761 - L2 LINE L2 -4 3309 3212 21 0 0 0 chr5 104614980 104615001 -98470531 + AT_rich Low_complexity Low_complexity 1 21 0 337 224 13 0 chr5 104615391 104615467 -98470065 - Charlie8 DNA MER1_type -2205 212 136 2556 59 0 7 chr5 104615471 104615778 -98469754 - AluY SINE Alu -6 305 1 1487 159 88 25 chr5 104615809 104615982 -98469550 - AluJb SINE Alu -11 301 102 198 0 0 0 chr5 104615982 104616004 -98469528 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1487 159 88 25 chr5 104616004 104616113 -98469419 - AluJb SINE Alu -210 102 1 2146 100 3 23 chr5 104616350 104616649 -98468883 - AluSx SINE Alu -19 293 1 182 217 130 0 chr5 104616750 104616796 -98468736 + MIR SINE MIR 49 100 -162 234 270 63 0 chr5 104617475 104617538 -98467994 + L2 LINE L2 3244 3310 -3 345 321 138 30 chr5 104617604 104617965 -98467567 - MLT1L LTR MaLR -21 594 195 406 141 35 59 chr5 104619148 104619233 -98466299 - MIR SINE MIR -62 200 118 901 226 55 5 chr5 104619272 104619471 -98466061 - MER58A DNA MER1_type -15 209 1 2004 147 3 0 chr5 104619648 104619940 -98465592 + AluSq SINE Alu 1 293 -20 2415 112 0 0 chr5 104621212 104621524 -98464008 + AluSx SINE Alu 1 312 0 545 293 20 14 chr5 104621669 104621816 -98463716 - MIR SINE MIR -88 174 27 734 262 91 42 chr5 104622334 104622620 -98462912 + MLT1I LTR MaLR 105 404 -5 2083 36 12 0 chr5 104623697 104623947 -98461585 + L1PA3 LINE L1 5892 6144 -11 342 0 0 0 chr5 104623948 104623986 -98461546 + (TA)n Simple_repeat Simple_repeat 2 39 0 325 244 165 16 chr5 104624326 104624453 -98461079 - MER5A DNA MER1_type -6 183 38 420 214 86 17 chr5 104624614 104624731 -98460801 + MER94 DNA DNA 7 131 -3 379 325 147 33 chr5 104627086 104627877 -98457655 + L2 LINE L2 1566 2446 -868 756 185 201 5 chr5 104627949 104628138 -98457394 - MIR SINE MIR -35 227 2 563 266 158 10 chr5 104628798 104629001 -98456531 + MIR SINE MIR 2 234 -28 185 306 47 35 chr5 104629502 104629587 -98455945 + L2 LINE L2 3187 3272 0 871 174 84 13 chr5 104630152 104630307 -98455225 + FRAM SINE Alu 1 166 0 201 74 0 0 chr5 104631737 104631764 -98453768 + (A)n Simple_repeat Simple_repeat 1 27 0 1944 144 14 3 chr5 104632532 104632824 -98452708 - AluJo SINE Alu -17 295 1 622 268 37 64 chr5 104633503 104633798 -98451734 + MLT1G1 LTR MaLR 1 287 -308 262 333 51 36 chr5 104634001 104634139 -98451393 + MIR SINE MIR 27 166 -96 249 294 37 68 chr5 104634627 104634790 -98450742 + MIR SINE MIR 59 216 -46 408 365 63 37 chr5 104634816 104635375 -98450157 + L2 LINE L2 2437 3081 -191 823 294 132 10 chr5 104635767 104636056 -98449476 - MLT1I LTR MaLR 0 409 86 15080 163 31 16 chr5 104636322 104637267 -98448265 + L1MA4 LINE L1 2234 3163 -3137 2181 114 0 3 chr5 104637267 104637564 -98447968 + AluSq SINE Alu 11 306 -7 15080 163 31 16 chr5 104637564 104637802 -98447730 + L1MA4 LINE L1 3163 3396 -2904 2041 118 0 7 chr5 104637802 104638090 -98447442 + AluSq SINE Alu 1 286 -27 3403 51 5 2 chr5 104638090 104638524 -98447008 + L1PA5 LINE L1 5720 6154 0 15080 163 31 16 chr5 104638524 104641338 -98444194 + L1MA4 LINE L1 3395 6295 -5 455 286 117 21 chr5 104641759 104642049 -98443483 + Charlie4 DNA MER1_type 452 769 -1192 1473 135 30 30 chr5 104643607 104643874 -98441658 - MLT1D LTR MaLR 0 505 239 684 194 11 74 chr5 104644294 104644469 -98441063 - MLT1D LTR MaLR -462 164 1 553 288 35 12 chr5 104644689 104644859 -98440673 + MIR3 SINE MIR 29 202 -6 1934 213 97 30 chr5 104645287 104645394 -98440138 + MLT1E3 LTR MaLR 3 101 -523 2609 99 8 6 chr5 104645394 104645757 -98439775 - THE1B LTR MaLR 0 364 1 2885 6 0 0 chr5 104645766 104646077 -98439455 + AluYa5 SINE Alu 1 311 0 1934 213 97 30 chr5 104646077 104646579 -98438953 + MLT1E3 LTR MaLR 108 622 -2 294 87 29 14 chr5 104647753 104647822 -98437710 + (TA)n Simple_repeat Simple_repeat 2 71 0 303 28 0 0 chr5 104649761 104649797 -98435735 + (TG)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr5 104651614 104651649 -98433883 + AT_rich Low_complexity Low_complexity 1 35 0 296 229 0 0 chr5 104653171 104653232 -98432300 + L2 LINE L2 3252 3312 -1 504 205 60 0 chr5 104653914 104654031 -98431501 + MIR SINE MIR 137 260 -2 21 0 0 0 chr5 104654079 104654100 -98431432 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr5 104657414 104657457 -98428075 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr5 104658236 104658272 -98427260 + AT_rich Low_complexity Low_complexity 1 36 0 466 267 134 51 chr5 104659432 104659452 -98426080 - MIR SINE MIR -12 250 233 1699 55 5 5 chr5 104659452 104659669 -98425863 - AluY SINE Alu -8 303 87 466 267 134 51 chr5 104659669 104659865 -98425667 - MIR SINE MIR -29 233 16 228 344 117 0 chr5 104661577 104661705 -98423827 + L2 LINE L2 3125 3267 -5 3179 151 84 3 chr5 104661910 104662506 -98423026 + MER73 LTR ERVL 1 644 0 2021 100 3 82 chr5 104662830 104663149 -98422383 + AluSx SINE Alu 1 294 -18 913 163 0 0 chr5 104663192 104663339 -98422193 + FRAM SINE Alu 5 151 -15 355 187 271 52 chr5 104664716 104664871 -98420661 - MER53 DNA DNA 0 189 1 433 300 0 50 chr5 104666451 104666611 -98418921 + MIR SINE MIR 100 251 -11 455 263 60 8 chr5 104666804 104666937 -98418595 + MIR SINE MIR 12 151 -111 383 169 57 0 chr5 104668389 104668513 -98417019 + (TA)n Simple_repeat Simple_repeat 2 132 0 238 320 64 39 chr5 104669551 104669629 -98415903 - L2 LINE L2 -56 3216 3137 191 362 29 0 chr5 104671761 104671830 -98413702 + MIR SINE MIR 77 147 -61 411 283 71 18 chr5 104671838 104671990 -98413542 + MIR SINE MIR 38 188 -51 33 100 0 0 chr5 104672777 104672887 -98412645 + AT_rich Low_complexity Low_complexity 1 110 0 554 229 36 54 chr5 104672956 104673122 -98412410 + L2 LINE L2 3151 3313 0 527 319 105 30 chr5 104673534 104673838 -98411694 - L3 LINE CR1 -189 1388 1062 21 0 0 0 chr5 104674029 104674050 -98411482 + AT_rich Low_complexity Low_complexity 1 21 0 407 295 109 0 chr5 104675227 104675383 -98410149 + MIR SINE MIR 2 174 -88 236 254 15 15 chr5 104675639 104675706 -98409826 + MLT1H LTR MaLR 1 67 -482 591 211 178 6 chr5 104675831 104676011 -98409521 + MLT1H LTR MaLR 339 549 0 326 353 35 13 chr5 104676031 104676238 -98409294 + MIR SINE MIR 3 212 -42 2322 61 7 0 chr5 104676269 104676577 -98408955 - AluY SINE Alu 0 310 1 21 36 0 0 chr5 104676587 104676615 -98408917 + AT_rich Low_complexity Low_complexity 1 28 0 1949 145 0 3 chr5 104677184 104677473 -98408059 + AluJo SINE Alu 1 288 -24 295 234 151 13 chr5 104677569 104677707 -98407825 - MIR SINE MIR -61 147 5 442 291 39 39 chr5 104679476 104679655 -98405877 + MER20 DNA MER1_type 20 198 -21 234 176 0 0 chr5 104684295 104684346 -98401186 + A-rich Low_complexity Low_complexity 1 51 0 994 165 13 0 chr5 104684469 104684627 -98400905 + FAM SINE Alu 13 172 -13 2328 204 72 40 chr5 104684634 104684736 -98400796 + L1MB7 LINE L1 4991 5088 -1078 261 0 0 0 chr5 104684736 104684765 -98400767 + (TC)n Simple_repeat Simple_repeat 2 30 0 2328 204 72 40 chr5 104684765 104685470 -98400062 + L1MB7 LINE L1 5088 5818 -348 602 155 46 18 chr5 104685474 104685711 -98399821 + AluJ SINE Alu 22 300 -12 875 173 75 0 chr5 104685716 104685922 -98399610 + L1MB7 LINE L1 5828 6049 -125 524 196 0 0 chr5 104685912 104686014 -98399518 + L1MB8 LINE L1 6067 6168 -10 * 206 293 17 26 chr5 104688002 104688118 -98397414 + (TATATG)n Simple_repeat Simple_repeat 5 119 0 31 0 0 0 chr5 104688357 104688388 -98397144 + AT_rich Low_complexity Low_complexity 1 31 0 2134 81 7 21 chr5 104688962 104689287 -98396245 + AluSg SINE Alu 1 321 0 1151 281 95 12 chr5 104689685 104690084 -98395448 + MLT1K LTR MaLR 44 475 -113 252 324 56 0 chr5 104690196 104690304 -98395228 + MER5B DNA MER1_type 64 177 -1 2004 113 3 11 chr5 104690918 104691270 -98394262 - AluSx SINE Alu 0 350 1 560 297 68 5 chr5 104692720 104692939 -98392593 - MIR SINE MIR -9 253 21 359 261 76 45 chr5 104693436 104693505 -98392027 - MIR SINE MIR 0 262 197 1207 232 0 8 chr5 104693505 104693746 -98391786 + MER8 DNA MER2_type 1 239 0 359 261 76 45 chr5 104693746 104693833 -98391699 - MIR SINE MIR -65 197 101 261 77 26 0 chr5 104693833 104693872 -98391660 - MADE1 DNA Mariner 0 80 41 20688 94 8 15 chr5 104693906 104697724 -98387808 - L1PA7 LINE L1 -7 6462 2665 12371 104 20 64 chr5 104698571 104701264 -98384268 - L1PA7 LINE L1 -3783 2678 8 267 50 25 0 chr5 104701284 104701324 -98384208 + MADE1 DNA Mariner 40 80 0 190 231 264 2 chr5 104701329 104701412 -98384120 - MIR SINE MIR -110 98 9 24 0 0 0 chr5 104702242 104702266 -98383266 + AT_rich Low_complexity Low_complexity 1 24 0 342 0 0 0 chr5 104704449 104704487 -98381045 + (CA)n Simple_repeat Simple_repeat 2 39 0 2115 113 22 19 chr5 104706645 104706956 -98378576 - AluSq SINE Alu -1 312 1 327 320 59 7 chr5 104707099 104707252 -98378280 - MIR SINE MIR -14 248 88 213 221 295 25 chr5 104707318 104707440 -98378092 + MIR SINE MIR 94 248 -14 2322 71 0 0 chr5 104707562 104707867 -98377665 + AluY SINE Alu 1 305 0 1375 95 0 0 chr5 104707867 104708046 -98377486 + AluSg/x SINE Alu 131 309 -3 841 298 4 28 chr5 104708905 104708935 -98376597 + MIR SINE MIR 3 32 -230 1975 140 0 10 chr5 104708935 104709243 -98376289 + AluJo SINE Alu 1 305 -7 841 298 4 28 chr5 104709243 104709460 -98376072 + MIR SINE MIR 32 244 -18 228 310 0 42 chr5 104710500 104710571 -98374961 + L2 LINE L2 3246 3313 0 23 0 0 0 chr5 104711407 104711430 -98374102 + AT_rich Low_complexity Low_complexity 1 23 0 537 312 101 0 chr5 104711561 104711750 -98373782 + MIR SINE MIR 49 256 -6 288 269 57 29 chr5 104712448 104712561 -98372971 + MIR SINE MIR 21 146 -62 180 256 93 0 chr5 104712828 104712871 -98372661 + MIR SINE MIR 199 245 -17 22 56 0 0 chr5 104714901 104714937 -98370595 + AT_rich Low_complexity Low_complexity 1 36 0 226 317 42 60 chr5 104715112 104715279 -98370253 + MER117 DNA MER1_type 3 166 -31 2324 103 3 0 chr5 104715860 104716171 -98369361 + AluSx SINE Alu 1 312 0 220 256 0 64 chr5 104716634 104716712 -98368820 + T-rich Low_complexity Low_complexity 2 74 0 186 214 0 24 chr5 104716747 104716789 -98368743 + MER5B DNA MER1_type 1 41 -137 5593 126 21 20 chr5 104716789 104716978 -98368554 + L1PA15 LINE L1 5115 5302 -863 2326 126 20 3 chr5 104716978 104717336 -98368196 - THE1B LTR MaLR 0 364 1 5593 126 21 20 chr5 104717336 104717372 -98368160 + L1PA15 LINE L1 5302 5336 -829 1838 164 3 22 chr5 104717372 104717690 -98367842 - AluJb SINE Alu 0 312 1 5593 126 21 20 chr5 104717690 104718492 -98367040 + L1PA15 LINE L1 5336 6143 -22 241 302 0 35 chr5 104718505 104718591 -98366941 + MER5B DNA MER1_type 29 111 -67 371 145 12 0 chr5 104718602 104718685 -98366847 + (TG)n Simple_repeat Simple_repeat 1 84 0 730 253 22 6 chr5 104718734 104718916 -98366616 + MER5A DNA MER1_type 1 185 -4 215 243 432 0 chr5 104718952 104719063 -98366469 + MER5A DNA MER1_type 31 189 0 333 0 0 0 chr5 104719486 104719523 -98366009 + (TG)n Simple_repeat Simple_repeat 2 38 0 222 37 0 0 chr5 104719522 104719549 -98365983 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 28 48 0 0 chr5 104720613 104720655 -98364877 + AT_rich Low_complexity Low_complexity 1 42 0 273 353 20 0 chr5 104721259 104721361 -98364171 + L2 LINE L2 2946 3049 -223 21 0 0 0 chr5 104726481 104726502 -98359030 + AT_rich Low_complexity Low_complexity 1 21 0 239 278 200 0 chr5 104730516 104730606 -98354926 + MIR3 SINE MIR 96 203 -5 1675 148 30 0 chr5 104731132 104731437 -98354095 + L1MA5 LINE L1 5985 6298 -2 676 148 58 97 chr5 104732526 104732681 -98352851 + MER106B DNA MER1_type 1 149 -910 836 189 57 11 chr5 104737617 104737792 -98347740 + MIR SINE MIR 80 262 0 246 381 41 0 chr5 104738075 104738172 -98347360 - L2 LINE L2 -22 3250 3150 266 0 29 0 chr5 104740793 104740827 -98344705 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 23 33 0 0 chr5 104740959 104740989 -98344543 + AT_rich Low_complexity Low_complexity 1 30 0 230 71 0 48 chr5 104742075 104742117 -98343415 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr5 104746274 104746302 -98339230 + AT_rich Low_complexity Low_complexity 1 28 0 997 254 169 26 chr5 104746805 104747507 -98338025 - L2 LINE L2 -1 3312 2501 270 353 12 0 chr5 104748769 104748854 -98336678 - L2 LINE L2 -86 3186 3101 563 225 121 6 chr5 104750321 104750494 -98335038 - MER20B DNA MER1_type -2 781 589 811 262 110 71 chr5 104750495 104751062 -98334470 - L2 LINE L2 0 3313 2737 517 263 129 30 chr5 104751094 104751326 -98334206 - MER20B DNA MER1_type -528 255 1 664 157 151 6 chr5 104751334 104751500 -98334032 - Charlie1 DNA MER1_type 0 2761 2572 1004 199 6 0 chr5 104751504 104751675 -98333857 - Charlie1 DNA MER1_type -2585 176 5 474 328 64 42 chr5 104752448 104752713 -98332819 - L3 LINE CR1 -1 1576 1306 292 325 78 19 chr5 104752889 104753043 -98332489 + LTR67 LTR ERVL 99 261 -296 229 234 31 0 chr5 104753167 104753231 -98332301 + LTR67 LTR ERVL 442 507 -50 255 297 0 22 chr5 104753291 104753382 -98332150 - L3 LINE CR1 -286 1291 1203 632 247 22 91 chr5 104753405 104753636 -98331896 + MIR SINE MIR 48 262 0 185 246 53 18 chr5 104753717 104753774 -98331758 - L3 LINE CR1 -454 1123 1065 734 344 141 12 chr5 104753841 104754344 -98331188 - L3 LINE CR1 -630 947 380 186 189 0 0 chr5 104756902 104756939 -98328593 + CT-rich Low_complexity Low_complexity 2 38 0 23 0 0 0 chr5 104759637 104759660 -98325872 + AT_rich Low_complexity Low_complexity 1 23 0 2163 99 0 10 chr5 104761145 104761438 -98324094 + AluSg1 SINE Alu 1 290 -19 297 0 0 0 chr5 104761589 104761622 -98323910 + (CA)n Simple_repeat Simple_repeat 1 33 0 1292 217 36 30 chr5 104761839 104762143 -98323389 - AluJo SINE Alu -6 306 1 369 0 0 0 chr5 104763586 104763627 -98321905 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 234 304 49 39 chr5 104768574 104768676 -98316856 + MER102b DNA MER1_type 239 341 0 341 333 49 7 chr5 104768676 104768820 -98316712 - MIR3 SINE MIR -56 152 3 1467 147 35 73 chr5 104768889 104769202 -98316330 - AluJb SINE Alu -11 301 1 1965 139 0 27 chr5 104769208 104769503 -98316029 - AluSx SINE Alu -25 287 1 987 157 20 20 chr5 104769517 104769714 -98315818 - L1PA14 LINE L1 -9 6152 5956 376 254 16 40 chr5 104770596 104770722 -98314810 + MIR SINE MIR 18 140 -68 254 333 167 0 chr5 104772118 104772220 -98313312 + L2 LINE L2 3138 3256 -16 181 294 88 0 chr5 104772387 104772455 -98313077 - L2 LINE L2 0 3313 3240 310 302 47 16 chr5 104772540 104772668 -98312864 + MIR SINE MIR 21 147 -65 2448 99 8 8 chr5 104772895 104773259 -98312273 - THE1B LTR MaLR 0 364 1 1935 252 122 29 chr5 104773658 104774423 -98311109 + Charlie7 DNA MER1_type 26 861 -1751 306 280 136 32 chr5 104776075 104776200 -98309332 + MIR SINE MIR 14 151 -111 3133 272 95 21 chr5 104776655 104778041 -98307491 - L2 LINE L2 -11 3302 1815 1951 133 0 3 chr5 104778041 104778341 -98307191 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr5 104778479 104778508 -98307024 + AT_rich Low_complexity Low_complexity 1 29 0 210 300 0 50 chr5 104779875 104779935 -98305597 - L2 LINE L2 -100 3172 3116 26 0 0 0 chr5 104780357 104780383 -98305149 + AT_rich Low_complexity Low_complexity 1 26 0 229 263 35 0 chr5 104781783 104781840 -98303692 - MIR SINE MIR -63 145 87 233 303 22 0 chr5 104781949 104782038 -98303494 + L1MC4 LINE L1 6613 6703 -1339 294 194 0 0 chr5 104782039 104782101 -98303431 + (TA)n Simple_repeat Simple_repeat 1 62 0 2027 150 129 3 chr5 104783171 104783551 -98301981 + MSTA LTR MaLR 1 428 0 229 233 10 58 chr5 104783591 104783694 -98301838 + (TTA)n Simple_repeat Simple_repeat 2 99 0 521 263 39 39 chr5 104783712 104783868 -98301664 - MIR SINE MIR -14 248 93 1992 95 0 28 chr5 104784016 104784299 -98301233 + AluSc SINE Alu 35 309 0 334 306 81 25 chr5 104784314 104784474 -98301058 - MIR SINE MIR -19 243 75 52 41 0 0 chr5 104784923 104784996 -98300536 + AT_rich Low_complexity Low_complexity 1 73 0 1390 137 39 143 chr5 104785541 104785877 -98299655 - AluJo SINE Alu 0 302 2 209 198 111 62 chr5 104787005 104787086 -98298446 - MIR SINE MIR -72 190 106 209 226 65 0 chr5 104788141 104788203 -98297329 + MIR SINE MIR 67 132 -130 806 224 17 6 chr5 104788541 104788715 -98296817 + MER5A DNA MER1_type 8 183 -6 204 320 60 10 chr5 104789319 104789419 -98296113 - MER5B DNA MER1_type -72 106 2 385 332 10 0 chr5 104790694 104790828 -98294704 - MIR SINE MIR -63 145 11 2258 60 3 3 chr5 104792299 104792627 -98292905 + AluY SINE Alu 1 328 0 2142 103 7 3 chr5 104794334 104794626 -98290906 - AluSp SINE Alu -20 293 1 216 0 0 0 chr5 104794836 104794860 -98290672 + (A)n Simple_repeat Simple_repeat 1 24 0 219 219 0 0 chr5 104797023 104797064 -98288468 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2484 59 0 3 chr5 104797244 104797547 -98287985 - AluY SINE Alu -9 302 1 204 158 0 0 chr5 104798493 104798531 -98287001 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 306 0 0 0 chr5 104800048 104800082 -98285450 + (CA)n Simple_repeat Simple_repeat 2 35 0 46 62 0 0 chr5 104802019 104802100 -98283432 + AT_rich Low_complexity Low_complexity 1 81 0 2402 102 0 0 chr5 104802106 104802411 -98283121 - AluSx SINE Alu -6 306 2 225 0 0 0 chr5 104804052 104804077 -98281455 + (A)n Simple_repeat Simple_repeat 1 25 0 222 150 0 0 chr5 104805211 104805251 -98280281 + (CAT)n Simple_repeat Simple_repeat 2 41 0 27 49 0 0 chr5 104806023 104806064 -98279468 + AT_rich Low_complexity Low_complexity 1 41 0 22 56 0 0 chr5 104809395 104809431 -98276101 + AT_rich Low_complexity Low_complexity 1 36 0 772 341 58 48 chr5 104809822 104810566 -98274966 + L2 LINE L2 2499 3253 -19 21 82 0 0 chr5 104812079 104812128 -98273404 + AT_rich Low_complexity Low_complexity 1 49 0 260 233 44 22 chr5 104812359 104812449 -98273083 - L1MC4 LINE L1 -1337 6705 6614 209 180 20 0 chr5 104812452 104812502 -98273030 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 248 319 88 9 chr5 104813384 104813497 -98272035 - L3b LINE CR1 -59 1524 1403 203 287 57 82 chr5 104813859 104813981 -98271551 + L2 LINE L2 3186 3304 -9 490 291 153 32 chr5 104814917 104815295 -98270237 - L2 LINE L2 -86 3227 2804 551 311 53 19 chr5 104815365 104815574 -98269958 - L2 LINE L2 0 3313 3098 186 323 55 67 chr5 104816745 104816909 -98268623 - MIR SINE MIR -50 212 51 197 348 135 0 chr5 104816945 104817034 -98268498 - L2 LINE L2 -8 3305 3205 691 258 127 47 chr5 104817344 104817967 -98267565 - L2 LINE L2 0 3313 1957 207 0 0 0 chr5 104819389 104819412 -98266120 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 456 19 0 0 chr5 104819411 104819464 -98266068 + (GA)n Simple_repeat Simple_repeat 2 54 0 1506 161 7 29 chr5 104819471 104819744 -98265788 - AluJo SINE Alu -34 278 12 344 270 36 133 chr5 104820490 104820686 -98264846 - MER5B DNA MER1_type -1 177 1 25 65 0 0 chr5 104821956 104822002 -98263530 + AT_rich Low_complexity Low_complexity 1 46 0 310 195 0 39 chr5 104822330 104822458 -98263074 + (TA)n Simple_repeat Simple_repeat 2 124 0 2213 82 24 3 chr5 104822505 104822797 -98262735 + AluY SINE Alu 1 298 -13 1100 224 0 12 chr5 104822799 104823040 -98262492 - L1PB4 LINE L1 -7 6149 5912 2053 148 0 0 chr5 104823723 104824027 -98261505 + AluSx SINE Alu 1 304 -8 26 64 0 0 chr5 104825343 104825390 -98260142 + AT_rich Low_complexity Low_complexity 1 47 0 837 154 16 35 chr5 104825429 104825631 -98259901 + L1PB4 LINE L1 5597 5801 -355 327 226 0 65 chr5 104825631 104825724 -98259808 - L1MC4 LINE L1 -1342 6700 6614 324 247 11 21 chr5 104825726 104825819 -98259713 - L1MC4 LINE L1 -1337 6705 6614 * 346 299 0 0 chr5 104825757 104825844 -98259688 + L1MC4 LINE L1 6616 6702 -1340 1014 144 0 0 chr5 104825858 104826038 -98259494 + (TA)n Simple_repeat Simple_repeat 1 180 0 2123 150 14 8 chr5 104826038 104826387 -98259145 + L1PB4 LINE L1 5790 6143 -13 32016 110 10 56 chr5 104826802 104833260 -98252272 + L1PA7 LINE L1 9 6153 -1 320 361 10 2 chr5 104833260 104833380 -98252152 - MIR SINE MIR -80 128 9 395 372 37 5 chr5 104833481 104833672 -98251860 - L3b LINE CR1 -117 1466 1270 696 200 47 0 chr5 104833685 104833835 -98251697 - L1PB1 LINE L1 -794 5352 5196 * 2758 135 11 7 chr5 104833827 104834279 -98251253 + L1PB1 LINE L1 5342 5795 -356 201 152 63 38 chr5 104834279 104834343 -98251189 + (TA)n Simple_repeat Simple_repeat 1 69 -12 2634 85 14 3 chr5 104834343 104834709 -98250823 + L1PB1 LINE L1 5781 6150 -1 201 152 63 38 chr5 104834709 104834723 -98250809 + (TA)n Simple_repeat Simple_repeat 69 81 0 877 236 12 79 chr5 104834773 104835027 -98250505 - MLT1A1 LTR MaLR -128 237 1 2871 168 28 14 chr5 104835027 104836021 -98249511 - L1M2 LINE L1 -546 6726 5707 * 2910 231 36 30 chr5 104836016 104837087 -98248445 - L1M2 LINE L1 -3320 3786 2711 719 254 41 62 chr5 104837083 104837425 -98248107 - L1M2 LINE L1 -6432 598 2 * 1058 210 52 95 chr5 104837527 104837894 -98247638 + MLT1A1 LTR MaLR 11 361 -4 206 311 50 85 chr5 104837924 104838084 -98247448 - MIR SINE MIR -98 164 12 382 208 148 0 chr5 104838237 104838338 -98247194 - MIR SINE MIR -74 188 73 2376 86 0 0 chr5 104838347 104838649 -98246883 + AluY SINE Alu 1 302 -9 395 272 190 26 chr5 104839139 104839334 -98246198 - MIR SINE MIR -4 258 32 376 267 93 20 chr5 104840054 104840204 -98245328 + MER103 DNA DNA 1 161 -5 22 35 0 0 chr5 104841774 104841803 -98243729 + AT_rich Low_complexity Low_complexity 1 29 0 234 289 33 11 chr5 104842930 104843020 -98242512 + MIR3 SINE MIR 85 176 -32 23 33 0 0 chr5 104843141 104843171 -98242361 + AT_rich Low_complexity Low_complexity 1 30 0 341 298 48 54 chr5 104843542 104843710 -98241822 + MLT1J2 LTR MaLR 281 447 -3 308 261 72 89 chr5 104844179 104844359 -98241173 + MLT1J LTR MaLR 23 199 -312 22 0 0 0 chr5 104844468 104844490 -98241042 + AT_rich Low_complexity Low_complexity 1 22 0 211 283 0 0 chr5 104844892 104844938 -98240594 + L2 LINE L2 3227 3272 0 325 285 23 54 chr5 104844940 104845070 -98240462 - MIR SINE MIR -109 153 28 262 264 155 70 chr5 104845323 104845452 -98240080 + L2 LINE L2 3172 3311 -2 618 283 96 12 chr5 104845652 104845892 -98239640 + MIR SINE MIR 3 262 0 22 0 0 0 chr5 104845955 104845977 -98239555 + AT_rich Low_complexity Low_complexity 1 22 0 1492 197 11 14 chr5 104846105 104846389 -98239143 + AluJo SINE Alu 7 289 -23 24 32 0 0 chr5 104846473 104846504 -98239028 + AT_rich Low_complexity Low_complexity 1 31 0 1810 190 0 73 chr5 104847042 104847437 -98238095 + MLT1A2 LTR MaLR 1 366 -8 190 273 167 0 chr5 104847741 104847807 -98237725 + L2 LINE L2 3232 3308 -5 1387 129 5 0 chr5 104848093 104848294 -98237238 + AluSg/x SINE Alu 91 292 -20 198 0 0 0 chr5 104848364 104848386 -98237146 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 5383 165 42 7 chr5 104848638 104850705 -98234827 + L1MB1 LINE L1 3961 6167 -1 701 258 104 47 chr5 104851361 104851725 -98233807 + MLT1J1 LTR MaLR 62 446 0 218 235 98 150 chr5 104852152 104852305 -98233227 - L3 LINE CR1 -1 1576 1432 835 263 217 9 chr5 104853283 104853750 -98231782 - L2 LINE L2 0 3313 2760 24 77 0 0 chr5 104854046 104854098 -98231434 + AT_rich Low_complexity Low_complexity 1 52 0 1782 246 88 27 chr5 104854287 104854450 -98231082 + MLT1E2 LTR MaLR 1 153 -473 1946 128 17 7 chr5 104854450 104854748 -98230784 + AluSx SINE Alu 11 311 -1 1782 246 88 27 chr5 104854748 104855195 -98230337 + MLT1E2 LTR MaLR 153 624 -2 665 226 0 0 chr5 104855358 104855473 -98230059 + FLAM_C SINE Alu 1 115 -18 372 119 0 0 chr5 104855474 104855533 -98229999 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 378 271 41 8 chr5 104855649 104855771 -98229761 - MLT1J LTR MaLR -383 128 3 276 290 123 75 chr5 104855812 104856105 -98229427 - L3 LINE CR1 -174 1403 1097 2138 128 0 3 chr5 104858339 104858645 -98226887 - AluSx SINE Alu -7 305 1 1160 227 123 7 chr5 104858691 104858999 -98226533 + MER2 DNA MER2_type 1 344 0 356 272 0 0 chr5 104858999 104859080 -98226452 - MIR SINE MIR -16 246 166 2090 125 46 27 chr5 104860533 104860901 -98224631 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr5 104860913 104860943 -98224589 + AT_rich Low_complexity Low_complexity 1 30 0 831 137 0 0 chr5 104860943 104861060 -98224472 - FLAM_C SINE Alu -21 122 6 518 147 181 9 chr5 104861156 104861272 -98224260 - MLT1E1 LTR MaLR -3 590 488 498 224 0 0 chr5 104861286 104861371 -98224161 + MER21B LTR ERV1 12 96 -767 3144 235 46 11 chr5 104861378 104862143 -98223389 + MER21B LTR ERV1 19 810 -53 1474 222 202 3 chr5 104862170 104862599 -98222933 - MLT1E1 LTR MaLR -140 514 1 2319 84 0 10 chr5 104863440 104863739 -98221793 + AluSq SINE Alu 15 310 -3 279 93 0 0 chr5 104864113 104864156 -98221376 + (ATG)n Simple_repeat Simple_repeat 3 45 0 307 290 60 0 chr5 104864169 104864269 -98221263 - MIR SINE MIR -20 242 137 476 276 108 47 chr5 104864315 104864729 -98220803 + LTR16C LTR ERVL 1 489 -2 236 269 46 56 chr5 104865465 104865573 -98219959 + LTR40b LTR ERVL 203 309 -153 246 282 14 0 chr5 104865577 104865648 -98219884 - LTR68 LTR ERV1 -668 72 1 2260 145 34 28 chr5 104866456 104867003 -98218529 + MLT2A2 LTR ERVL 1 553 -1 800 172 0 0 chr5 104867040 104867162 -98218370 - MER5A DNA MER1_type -2 187 66 23 33 0 0 chr5 104867807 104867837 -98217695 + AT_rich Low_complexity Low_complexity 1 30 0 1857 145 62 3 chr5 104868259 104868583 -98216949 + MER2 DNA MER2_type 2 344 0 557 207 18 0 chr5 104868897 104869008 -98216524 - L1MC1 LINE L1 -13 6320 6208 961 219 76 21 chr5 104869063 104869301 -98216231 + LTR48 LTR ERV1 133 383 -404 408 219 45 45 chr5 104869317 104869472 -98216060 + MER39 LTR ERV1 550 704 -3 553 178 10 0 chr5 104869479 104869580 -98215952 - L1MC1 LINE L1 -113 6220 6119 1442 223 3 0 chr5 104870433 104870720 -98214812 + LTR51 LTR ERV1 227 514 -157 269 230 14 14 chr5 104871381 104871455 -98214077 + MER31-int LTR ERV1 3656 3729 -1207 5070 138 62 3 chr5 104871861 104872746 -98212786 + Tigger3b DNA MER2_type 1 938 -293 1820 153 70 25 chr5 104872746 104873105 -98212427 + THE1C LTR MaLR 1 375 0 10061 105 32 44 chr5 104873105 104874704 -98210828 + THE1C-int LTR MaLR 1 1580 0 2092 106 70 25 chr5 104874704 104875063 -98210469 + THE1C LTR MaLR 1 375 0 1809 157 14 0 chr5 104875063 104875356 -98210176 + Tigger3b DNA MER2_type 934 1230 -2 978 140 112 17 chr5 104875488 104875666 -98209866 + MSTA LTR MaLR 234 428 0 8998 180 27 2 chr5 104875666 104877272 -98208260 + MSTA-int LTR MaLR 1 1646 -5 1719 155 137 41 chr5 104877281 104877669 -98207863 + MSTA LTR MaLR 4 428 0 2188 134 64 13 chr5 104877669 104878042 -98207490 - MER6A DNA MER2_type -212 393 2 293 185 22 43 chr5 104878067 104878159 -98207373 - L1MC4 LINE L1 -1339 6703 6614 210 222 0 0 chr5 104878159 104878213 -98207319 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 441 208 10 20 chr5 104878681 104878782 -98206750 + MER94 DNA DNA 27 126 -8 2459 82 65 11 chr5 104878783 104879139 -98206393 - THE1C LTR MaLR 0 375 1 236 316 21 11 chr5 104879154 104879249 -98206283 + L1MEd LINE L1 129 224 -5895 236 330 97 22 chr5 104879898 104880125 -98205407 + MER41B LTR ERV1 158 401 -234 1048 186 82 57 chr5 104880400 104880717 -98204815 + MLT1C LTR MaLR 1 325 -142 692 210 8 0 chr5 104880721 104880845 -98204687 + FRAM SINE Alu 4 128 -48 540 95 0 0 chr5 104880854 104880938 -98204594 + (GA)n Simple_repeat Simple_repeat 1 84 0 342 239 88 33 chr5 104880938 104881075 -98204457 + MLT1C LTR MaLR 248 467 0 512 163 66 133 chr5 104881312 104881508 -98204024 - MER53 DNA DNA 0 189 7 292 271 8 68 chr5 104881520 104881638 -98203894 - MIR SINE MIR -144 118 8 191 363 102 19 chr5 104882036 104882251 -98203281 + L2 LINE L2 2438 2670 -644 369 323 124 25 chr5 104882486 104882768 -98202764 - Charlie8 DNA MER1_type -1927 490 181 3840 191 71 59 chr5 104882774 104883262 -98202270 - L1MC4a LINE L1 -371 7437 6956 1853 156 140 8 chr5 104883262 104883640 -98201892 + MSTA LTR MaLR 1 428 0 3840 191 71 59 chr5 104883640 104884236 -98201296 - L1MC4a LINE L1 -852 6956 6340 14751 111 18 62 chr5 104884253 104885813 -98199719 + Tigger1 DNA MER2_type 4 1412 -1006 1435 211 20 10 chr5 104885813 104886116 -98199416 + AluJo SINE Alu 1 306 -6 14751 111 18 62 chr5 104886116 104887081 -98198451 + Tigger1 DNA MER2_type 1412 2418 0 1514 258 18 31 chr5 104887083 104887695 -98197837 - L1MC4a LINE L1 -1482 6326 5674 783 169 8 0 chr5 104888018 104888148 -98197384 - FLAM_C SINE Alu -10 133 3 27 0 0 0 chr5 104889331 104889358 -98196174 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 104889807 104889835 -98195697 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 104890138 104890167 -98195365 + AT_rich Low_complexity Low_complexity 1 29 0 1431 193 65 12 chr5 104890964 104891285 -98194247 - L1MA9 LINE L1 -3 6309 5972 232 188 31 16 chr5 104891313 104891377 -98194155 - L1MC/D LINE L1 -2013 5795 5731 289 255 29 4 chr5 104891430 104891552 -98193980 - L1MC/D LINE L1 -531 5590 5470 471 319 167 36 chr5 104892229 104892871 -98192661 - L1MC/D LINE L1 -763 5383 4658 651 233 102 11 chr5 104892908 104893084 -98192448 + MIR SINE MIR 36 227 -35 316 116 0 0 chr5 104893129 104893172 -98192360 + MIR SINE MIR 215 257 -5 233 308 122 37 chr5 104893172 104893746 -98191786 - L1MC/D LINE L1 -1512 4634 4012 483 57 143 0 chr5 104894019 104894089 -98191443 + MADE1 DNA Mariner 1 80 0 503 298 35 6 chr5 104894479 104894650 -98190882 - MER117 DNA MER1_type -6 191 16 1636 194 6 6 chr5 104895798 104896133 -98189399 - L1 LINE L1 -858 5288 4954 3498 214 35 0 chr5 104896147 104896483 -98189049 + L1 LINE L1 3843 4166 -1980 270 0 0 0 chr5 104896483 104896513 -98189019 + (CA)n Simple_repeat Simple_repeat 2 31 0 3498 214 35 0 chr5 104896513 104897214 -98188318 + L1 LINE L1 4166 4953 -1193 281 181 0 133 chr5 104897592 104897675 -98187857 + MER5B DNA MER1_type 98 169 -9 419 277 69 102 chr5 104897792 104897989 -98187543 + ERVL LTR ERVL 4865 5050 -714 2862 108 36 6 chr5 104897989 104898463 -98187069 - L1MA3 LINE L1 0 6305 5818 419 277 69 102 chr5 104898463 104898568 -98186964 + ERVL LTR ERVL 5050 5157 -607 574 219 23 16 chr5 104899976 104900104 -98185428 + MER94 DNA DNA 1 129 -5 2150 89 14 0 chr5 104900714 104901005 -98184527 + AluSg SINE Alu 1 295 -15 216 313 17 61 chr5 104901104 104901219 -98184313 + MIR SINE MIR 36 145 -63 13685 219 24 8 chr5 104901992 104907549 -98177983 + L1PA16 LINE L1 395 6196 -27 21 0 0 0 chr5 104907552 104907573 -98177959 + AT_rich Low_complexity Low_complexity 1 21 0 350 254 142 40 chr5 104909115 104909390 -98176142 + L1ME4a LINE L1 5808 6110 -11 1980 134 13 13 chr5 104909418 104909725 -98175807 + AluSq SINE Alu 1 307 -6 1297 168 57 24 chr5 104910145 104910442 -98175090 + L1MC3 LINE L1 6938 7244 -541 185 143 0 0 chr5 104910498 104910526 -98175006 - MIR SINE MIR -117 145 118 301 357 26 19 chr5 104910656 104910810 -98174722 + MIR3 SINE MIR 31 185 -23 417 259 9 9 chr5 104910861 104910969 -98174563 + MIR SINE MIR 107 214 -48 231 36 0 0 chr5 104911713 104911741 -98173791 + (A)n Simple_repeat Simple_repeat 1 28 0 1997 141 0 22 chr5 104911988 104912300 -98173232 + AluSx SINE Alu 1 305 -7 793 301 93 27 chr5 104912498 104912937 -98172595 + MLT1K LTR MaLR 105 572 -16 417 320 70 6 chr5 104912992 104913148 -98172384 - MIR SINE MIR -79 183 18 240 86 0 0 chr5 104913148 104913183 -98172349 + (A)n Simple_repeat Simple_repeat 1 35 0 663 289 74 58 chr5 104914562 104914995 -98170537 - L1MC4a LINE L1 -1895 5913 5474 1058 303 152 32 chr5 104916374 104917296 -98168236 + L2 LINE L2 2291 3311 -2 853 271 45 4 chr5 104917659 104917906 -98167626 + MIR SINE MIR 1 257 -5 215 289 0 0 chr5 104918631 104918676 -98166856 + L2 LINE L2 3133 3177 -95 380 297 59 8 chr5 104918797 104918915 -98166617 + L2 LINE L2 3188 3311 -2 505 156 21 130 chr5 104922046 104922238 -98163294 - MER53 DNA DNA -11 178 8 1961 210 80 16 chr5 104922553 104922992 -98162540 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 104923468 104923490 -98162042 + AT_rich Low_complexity Low_complexity 1 22 0 2232 113 23 0 chr5 104923539 104923885 -98161647 + L1PA15 LINE L1 5812 6165 0 317 260 106 41 chr5 104924083 104924206 -98161326 + MER5A DNA MER1_type 3 133 -56 243 111 0 0 chr5 104924268 104924304 -98161228 + MER53 DNA DNA 153 188 -1 222 290 48 0 chr5 104925300 104925362 -98160170 - MER5A DNA MER1_type -9 180 116 184 313 0 21 chr5 104926040 104926088 -98159444 - MIR SINE MIR -106 102 56 1624 121 11 45 chr5 104926636 104926900 -98158632 - AluSx SINE Alu -12 300 46 597 253 236 6 chr5 104927250 104927432 -98158100 - MIR SINE MIR -2 260 37 560 333 46 17 chr5 104927498 104927735 -98157797 + MIR SINE MIR 14 257 -5 216 167 0 0 chr5 104928697 104928733 -98156799 + (CA)n Simple_repeat Simple_repeat 2 37 0 204 259 115 50 chr5 104930249 104930401 -98155131 + MIR SINE MIR 37 191 -71 3230 141 22 7 chr5 104930868 104931415 -98154117 + L1PA16 LINE L1 5609 6163 -3 189 147 0 0 chr5 104931541 104931575 -98153957 + (GAGAA)n Simple_repeat Simple_repeat 2 35 0 1850 112 0 8 chr5 104932524 104932775 -98152757 + AluSx SINE Alu 1 249 -63 264 59 0 0 chr5 104932775 104932809 -98152723 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 897 275 0 3 chr5 104933243 104933570 -98151962 - AluYa5 SINE Alu 0 326 1 13301 94 12 2 chr5 104933714 104935643 -98149889 + L1P LINE L1 2494 4442 -1704 2776 10 0 0 chr5 104935969 104936273 -98149259 - AluYa5 SINE Alu -7 304 1 559 295 75 21 chr5 104936285 104936526 -98149006 - MIR SINE MIR -2 260 7 2054 132 3 3 chr5 104937344 104937654 -98147878 - AluJo SINE Alu 0 312 3 1219 173 0 10 chr5 104938146 104938354 -98147178 - AluJb SINE Alu -24 288 83 24 32 0 0 chr5 104938354 104938385 -98147147 + AT_rich Low_complexity Low_complexity 1 31 0 30 0 0 0 chr5 104939675 104939705 -98145827 + AT_rich Low_complexity Low_complexity 1 30 0 1145 278 51 16 chr5 104939795 104940284 -98145248 + L1M4 LINE L1 3633 4138 -2008 4221 148 26 4 chr5 104940312 104941344 -98144188 + L1MA6 LINE L1 4903 5956 -344 1720 165 7 7 chr5 104941354 104941633 -98143899 - MER1B DNA MER1_type -59 280 2 1954 133 30 3 chr5 104941633 104941971 -98143561 + L1MA6 LINE L1 5954 6300 0 34 24 0 0 chr5 104942135 104942176 -98143356 + AT_rich Low_complexity Low_complexity 1 41 0 1542 132 52 46 chr5 104942208 104942533 -98142999 - L1MA7 LINE L1 -7 6284 5958 217 89 44 0 chr5 104942820 104942865 -98142667 + GA-rich Low_complexity Low_complexity 1 47 0 2323 86 0 17 chr5 104944239 104944541 -98140991 - AluY SINE Alu -14 297 1 219 235 59 0 chr5 104945873 104945924 -98139608 - MIR SINE MIR -34 228 175 260 211 39 0 chr5 104945959 104946011 -98139521 + L2 LINE L2 3001 3054 -259 288 0 0 0 chr5 104946620 104946652 -98138880 + (TG)n Simple_repeat Simple_repeat 1 32 0 316 317 63 28 chr5 104947141 104947279 -98138253 - MIR3 SINE MIR -63 145 11 2266 59 0 0 chr5 104947279 104947550 -98137982 - AluY SINE Alu -7 304 34 258 301 13 83 chr5 104948325 104948771 -98136761 - MER5A DNA MER1_type -6 183 39 351 297 6 73 chr5 104948342 104948383 -98137149 + MER5A DNA MER1_type 35 77 -112 2276 72 0 17 chr5 104948383 104948674 -98136858 + AluSg SINE Alu 15 300 -10 351 297 6 73 chr5 104948674 104948797 -98136735 + MER5A DNA MER1_type 77 188 -1 443 336 0 8 chr5 104949496 104949630 -98135902 + MIR3 SINE MIR 65 197 -11 260 211 39 0 chr5 104949808 104949860 -98135672 + L2 LINE L2 3001 3054 -259 1499 130 133 32 chr5 104950525 104950833 -98134699 - MER44D DNA MER2_type 0 609 1 2494 58 0 0 chr5 104952016 104952310 -98133222 - AluY SINE Alu -17 294 1 375 23 0 0 chr5 104952561 104952605 -98132927 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 477 286 43 70 chr5 104953231 104953416 -98132116 + MIR SINE MIR 4 183 -79 42 0 0 0 chr5 104954250 104954292 -98131240 + AT_rich Low_complexity Low_complexity 1 42 0 206 32 32 0 chr5 104955673 104955704 -98129828 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1150 197 102 3 chr5 104957073 104957368 -98128164 - MER33 DNA MER1_type 0 324 1 404 258 83 108 chr5 104957382 104957622 -98127910 + L2 LINE L2 2994 3227 -86 25 51 0 0 chr5 104957658 104957697 -98127835 + AT_rich Low_complexity Low_complexity 1 39 0 416 298 60 79 chr5 104957987 104958302 -98127230 + MLT1K LTR MaLR 171 479 -109 249 308 42 0 chr5 104958327 104958447 -98127085 + L1ME LINE L1 5685 5809 -361 30 0 0 0 chr5 104958774 104958804 -98126728 + AT_rich Low_complexity Low_complexity 1 30 0 205 200 20 20 chr5 104958973 104959023 -98126509 + GA-rich Low_complexity Low_complexity 2 51 0 772 275 102 54 chr5 104959909 104960629 -98124903 - L1ME1 LINE L1 -241 5925 5114 189 0 0 0 chr5 104960889 104960910 -98124622 + (ATG)n Simple_repeat Simple_repeat 3 23 0 459 275 61 81 chr5 104961880 104962127 -98123405 - MER102b DNA MER1_type -4 337 96 545 243 61 44 chr5 104962977 104963158 -98122374 - MIR SINE MIR -28 234 51 944 277 21 4 chr5 104963218 104963460 -98122072 - MIR SINE MIR -7 255 10 268 388 0 0 chr5 104964647 104964732 -98120800 + MIR SINE MIR 2 86 -176 326 47 0 0 chr5 104965473 104965516 -98120016 - MADE1 DNA Mariner -37 43 1 1221 228 78 92 chr5 104965877 104966384 -98119148 + MLT1G LTR MaLR 1 549 0 485 311 14 63 chr5 104966477 104966827 -98118705 + MLT1G1-int LTR MaLR 245 577 -794 1659 94 3 77 chr5 104966917 104967214 -98118318 + L1MA5 LINE L1 6024 6298 -2 196 106 85 0 chr5 104967218 104967265 -98118267 + GA-rich Low_complexity Low_complexity 1 51 0 248 289 105 95 chr5 104967859 104968174 -98117358 + MLT1G1-int LTR MaLR 1029 1346 -25 1751 241 128 26 chr5 104968199 104968731 -98116801 + MLT1G1 LTR MaLR 7 592 -3 2811 19 0 0 chr5 104969550 104969861 -98115671 - AluY SINE Alu 0 311 1 27 49 0 0 chr5 104971632 104971673 -98113859 + AT_rich Low_complexity Low_complexity 1 41 0 527 311 190 43 chr5 104971694 104972413 -98113119 - L2 LINE L2 -81 3232 2405 22 56 0 0 chr5 104972649 104972685 -98112847 + AT_rich Low_complexity Low_complexity 1 36 0 9076 28 0 0 chr5 104972974 104974824 -98110708 + L1PA3 LINE L1 4305 6154 -1 307 202 16 81 chr5 104975036 104975160 -98110372 + L1M4 LINE L1 5182 5297 -849 416 242 42 0 chr5 104975464 104975559 -98109973 + L1MC4 LINE L1 6798 6896 -1146 23 0 0 0 chr5 104975758 104975781 -98109751 + AT_rich Low_complexity Low_complexity 1 23 0 202 323 16 0 chr5 104976464 104976526 -98109006 + L2 LINE L2 3139 3201 -71 1508 250 117 0 chr5 104976587 104977023 -98108509 + MLT1H LTR MaLR 63 549 0 181 286 0 0 chr5 104977027 104977069 -98108463 + L2 LINE L2 3203 3244 -28 539 296 73 0 chr5 104977448 104977645 -98107887 + MIR SINE MIR 54 262 0 38 0 0 0 chr5 104977646 104977684 -98107848 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 104977841 104977871 -98107661 + AT_rich Low_complexity Low_complexity 1 30 0 389 327 62 31 chr5 104977873 104978099 -98107433 - L2 LINE L2 -337 2977 2745 308 157 20 0 chr5 104979691 104979742 -98105790 - MIR SINE MIR -179 83 32 700 268 66 71 chr5 104980750 104981142 -98104390 + MLT1K LTR MaLR 196 585 -3 348 242 42 50 chr5 104981166 104981286 -98104246 - L2 LINE L2 -8 3305 3187 21 57 0 0 chr5 104981695 104981730 -98103802 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr5 104981972 104982014 -98103518 + AT_rich Low_complexity Low_complexity 1 42 0 502 218 0 0 chr5 104982381 104982491 -98103041 - L1PA4 LINE L1 -1 6154 6045 23 0 0 0 chr5 104983456 104983479 -98102053 + AT_rich Low_complexity Low_complexity 1 23 0 608 266 192 24 chr5 104984809 104985148 -98100384 + MLT1J2 LTR MaLR 55 450 0 376 260 17 28 chr5 104987146 104987323 -98098209 - MER104 DNA MER2_type -1 179 5 18386 155 31 19 chr5 104987743 104990950 -98094582 + L1MA3 LINE L1 11 3257 -4308 3363 139 4 5 chr5 104990946 104991498 -98094034 - L1P LINE L1 -1368 4778 4228 * 6405 94 4 11 chr5 104991504 104991679 -98093853 + L1PA10 LINE L1 5217 5392 -776 2206 65 0 4 chr5 104991679 104991954 -98093578 + AluY SINE Alu 33 306 -5 6405 94 4 11 chr5 104991954 104992706 -98092826 + L1PA10 LINE L1 5392 6140 -28 405 98 0 0 chr5 104992706 104992767 -98092765 + L1PA10 LINE L1 6106 6166 -2 6405 94 4 11 chr5 104992767 104992784 -98092748 + L1PA10 LINE L1 6140 6156 -12 14919 172 23 13 chr5 104992784 104994429 -98091103 + L1MA3 LINE L1 3253 4880 -2844 2454 59 0 16 chr5 104994429 104994732 -98090800 + AluY SINE Alu 1 298 -13 14919 172 23 13 chr5 104994732 104995535 -98089997 + L1MA3 LINE L1 4880 5674 -2050 2446 81 0 0 chr5 104995535 104995843 -98089689 + AluY SINE Alu 1 308 -3 14919 172 23 13 chr5 104995843 104997814 -98087718 + L1MA3 LINE L1 5674 7724 0 2457 68 0 0 chr5 104998193 104998485 -98087047 - AluY SINE Alu -19 292 1 327 122 0 0 chr5 104998967 104999016 -98086516 + MLT2B1 LTR ERVL 472 520 0 576 345 91 19 chr5 104999948 105000310 -98085222 + L2 LINE L2 2925 3312 -1 2931 164 31 43 chr5 105002783 105003404 -98082128 + L1MB8 LINE L1 5566 6178 0 2475 163 63 51 chr5 105003993 105004199 -98081333 + MLT2B2 LTR ERVL 1 203 -312 2164 117 0 3 chr5 105004199 105004497 -98081035 - AluSx SINE Alu -15 297 1 2475 163 63 51 chr5 105004497 105004799 -98080733 + MLT2B2 LTR ERVL 203 515 0 2245 132 52 14 chr5 105005052 105005416 -98080116 - MLT1B LTR MaLR 0 390 13 618 256 9 57 chr5 105006134 105006345 -98079187 + L2 LINE L2 3113 3313 0 742 267 94 16 chr5 105006371 105006678 -98078854 + MARNA DNA Mariner 39 369 -217 202 312 67 90 chr5 105007095 105007451 -98078081 + L2 LINE L2 2874 3221 -51 1569 164 54 48 chr5 105007730 105007926 -98077606 - MER44D DNA MER2_type -1882 609 416 2066 107 55 3 chr5 105007926 105008215 -98077317 + AluSg SINE Alu 1 304 -6 1569 164 54 48 chr5 105008215 105008354 -98077178 - MER44D DNA MER2_type -2075 416 2 735 208 181 65 chr5 105008909 105009308 -98076224 - MLT1H LTR MaLR 0 549 105 22 0 0 0 chr5 105009364 105009386 -98076146 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr5 105009529 105009566 -98075966 + (A)n Simple_repeat Simple_repeat 1 37 0 2831 83 72 12 chr5 105009952 105010371 -98075161 + MLT2A1 LTR ERVL 1 444 0 240 300 8 33 chr5 105010984 105011104 -98074428 + GA-rich Low_complexity Low_complexity 3 119 0 560 265 15 0 chr5 105011196 105011339 -98074193 - MIR SINE MIR -62 146 45 553 306 126 5 chr5 105011762 105011984 -98073548 + MIR SINE MIR 3 251 -11 221 267 30 50 chr5 105012784 105012885 -98072647 - MIR3 SINE MIR -6 202 104 210 369 135 0 chr5 105014290 105014401 -98071131 + L2 LINE L2 3147 3272 0 2374 49 3 67 chr5 105015113 105015442 -98070090 + AluY SINE Alu 1 308 -3 198 236 0 0 chr5 105016229 105016284 -98069248 + CT-rich Low_complexity Low_complexity 3 57 0 26 0 0 0 chr5 105017347 105017373 -98068159 + AT_rich Low_complexity Low_complexity 1 26 0 14601 216 22 13 chr5 105017963 105021606 -98063926 - L1PA16 LINE L1 -17 7587 3862 2183 82 4 4 chr5 105021606 105021923 -98063609 - AluY SINE Alu 0 317 1 14601 216 22 13 chr5 105021923 105023599 -98061933 - L1PA16 LINE L1 -3742 3862 2203 871 343 25 8 chr5 105024268 105024667 -98060865 - L1PA16 LINE L1 -7166 415 10 2339 129 41 59 chr5 105025320 105025532 -98060000 - Tigger2a DNA MER2_type -2274 434 220 1816 138 33 0 chr5 105025532 105025679 -98059853 - AluSx SINE Alu -27 285 144 333 0 0 0 chr5 105025679 105025716 -98059816 + (TA)n Simple_repeat Simple_repeat 2 38 0 1816 138 33 0 chr5 105025716 105025844 -98059688 - AluSx SINE Alu -168 144 1 2339 129 41 59 chr5 105025844 105026073 -98059459 - Tigger2a DNA MER2_type -2488 220 1 1707 153 79 20 chr5 105027623 105027977 -98057555 + THE1C LTR MaLR 1 375 0 259 341 0 12 chr5 105028967 105029052 -98056480 + MIR3 SINE MIR 111 194 -14 34 72 0 0 chr5 105029313 105029382 -98056150 + AT_rich Low_complexity Low_complexity 1 69 0 1309 248 96 65 chr5 105030286 105030858 -98054674 + MLT1E LTR MaLR 1 590 -3 189 273 0 0 chr5 105032058 105032102 -98053430 - MIR SINE MIR -133 129 86 1185 196 23 0 chr5 105032314 105032533 -98052999 + MER58A DNA MER1_type 1 224 0 1670 130 63 46 chr5 105033209 105033493 -98052039 + AluJb SINE Alu 7 295 -17 27 29 0 0 chr5 105033495 105033529 -98052003 + AT_rich Low_complexity Low_complexity 1 34 0 216 303 22 56 chr5 105034040 105034125 -98051407 - L2 LINE L2 -9 3263 3182 277 308 136 24 chr5 105034125 105034294 -98051238 + MER5A DNA MER1_type 1 188 -1 338 315 160 33 chr5 105034359 105034813 -98050719 - L2 LINE L2 -189 3083 2583 301 213 133 0 chr5 105034969 105035044 -98050488 - MIR SINE MIR 0 262 178 22 35 0 0 chr5 105035060 105035089 -98050443 + AT_rich Low_complexity Low_complexity 1 29 0 5900 131 27 7 chr5 105035091 105036288 -98049244 + L1MA7 LINE L1 5068 6291 0 628 197 7 44 chr5 105036297 105036434 -98049098 - MIR SINE MIR -128 134 3 319 307 115 26 chr5 105036518 105036710 -98048822 - L2 LINE L2 -966 2348 2140 27 49 0 0 chr5 105037574 105037615 -98047917 + AT_rich Low_complexity Low_complexity 1 41 0 204 245 0 0 chr5 105037771 105037820 -98047712 + L2 LINE L2 3208 3256 -16 294 266 75 32 chr5 105038320 105038414 -98047118 + MIR3 SINE MIR 66 163 -45 575 124 22 195 chr5 105039091 105039317 -98046215 - MER53 DNA DNA -1 188 2 653 287 149 37 chr5 105039342 105039690 -98045842 - MLT1J2 LTR MaLR -6 440 54 308 93 0 0 chr5 105039827 105039870 -98045662 - MADE1 DNA Mariner -37 43 1 2482 63 3 0 chr5 105041131 105041430 -98044102 - AluY SINE Alu -11 300 1 37091 53 8 4 chr5 105041482 105047016 -98038516 - L1PA5 LINE L1 0 6154 607 232 224 0 0 chr5 105047243 105047292 -98038240 + L2 LINE L2 3264 3312 -1 906 238 99 122 chr5 105048221 105049140 -98036392 + HAL1 LINE L1 778 1675 -832 754 250 14 19 chr5 105049144 105049356 -98036176 + MIR SINE MIR 52 262 0 212 250 156 16 chr5 105050738 105050802 -98034730 - L2 LINE L2 -9 3304 3232 2081 138 0 0 chr5 105050808 105051105 -98034427 + AluSx SINE Alu 1 297 -15 1362 144 78 43 chr5 105051166 105051422 -98034110 + AluSx SINE Alu 36 300 -12 1352 68 0 0 chr5 105051438 105051600 -98033932 - AluY SINE Alu -20 291 130 237 161 54 18 chr5 105051655 105051711 -98033821 - MLT2D LTR ERVL -8 406 349 25 31 0 0 chr5 105051711 105051743 -98033789 + AT_rich Low_complexity Low_complexity 1 32 0 384 253 10 10 chr5 105051766 105051865 -98033667 - MLT2D LTR ERVL -48 366 268 240 282 0 0 chr5 105051943 105052014 -98033518 - Tigger3(Golem) DNA MER2_type -1518 1511 1441 1027 140 149 32 chr5 105052124 105052345 -98033187 - Tigger6 DNA MER2_type -1270 327 81 496 362 41 8 chr5 105052348 105052594 -98032938 - L2 LINE L2 -1102 2212 1959 9743 132 151 36 chr5 105052600 105052932 -98032600 + L1PBa LINE L1 753 1045 -5817 377 132 0 0 chr5 105052932 105052985 -98032547 - AluS SINE Alu -19 283 231 9743 132 151 36 chr5 105052985 105054831 -98030701 + L1PBa LINE L1 1045 3319 -3543 2668 291 84 32 chr5 105054848 105056136 -98029396 + L2 LINE L2 1793 3154 -159 4998 204 22 6 chr5 105056183 105057244 -98028288 + Tigger6a DNA MER2_type 2 1079 -4 1565 213 44 101 chr5 105057268 105057345 -98028187 + L1MD2 LINE L1 4675 4755 -1409 1951 94 4 19 chr5 105057345 105057610 -98027922 + AluSg SINE Alu 40 300 -10 1565 213 44 101 chr5 105057610 105058480 -98027052 + L1MD2 LINE L1 4755 5569 -595 2061 55 0 0 chr5 105058480 105058734 -98026798 + L1PA7 LINE L1 5901 6154 0 1565 213 44 101 chr5 105058734 105058851 -98026681 + L1MD2 LINE L1 5569 5691 -473 2290 201 149 128 chr5 105058863 105058970 -98026562 + L1ME1 LINE L1 3474 3577 -2569 3554 145 22 75 chr5 105058970 105059700 -98025832 + LTR8 LTR ERV1 1 691 0 2290 201 149 128 chr5 105059700 105060066 -98025466 + L1ME1 LINE L1 3577 3934 -2212 1494 136 9 0 chr5 105060066 105060279 -98025253 + AluSx SINE Alu 1 215 -97 2031 116 22 0 chr5 105060280 105060579 -98024953 + AluSg SINE Alu 1 305 0 660 130 0 9 chr5 105060580 105060688 -98024844 + AluSx SINE Alu 203 309 -3 2290 201 149 128 chr5 105060688 105061474 -98024058 + L1ME1 LINE L1 3933 4874 -1272 5303 84 55 10 chr5 105061478 105061964 -98023568 + L1MA2 LINE L1 5457 5996 -308 2086 127 0 3 chr5 105061964 105062263 -98023269 - AluY SINE Alu -12 299 2 5303 84 55 10 chr5 105062263 105062587 -98022945 + L1MA2 LINE L1 5996 6304 0 2573 194 36 45 chr5 105062605 105063076 -98022456 + L1ME1 LINE L1 5272 5713 -453 2499 180 56 4 chr5 105063076 105063576 -98021956 + L1MD2 LINE L1 5819 6344 -15 2573 194 36 45 chr5 105063576 105064021 -98021511 + L1ME1 LINE L1 5713 6160 -6 373 127 99 0 chr5 105065800 105065871 -98019661 - L1MA3 LINE L1 -195 6110 6033 21 36 0 0 chr5 105067888 105067916 -98017616 + AT_rich Low_complexity Low_complexity 1 28 0 338 187 5 215 chr5 105068393 105068493 -98017039 - MIR SINE MIR -61 201 166 1606 162 49 39 chr5 105068493 105068801 -98016731 + AluJo SINE Alu 1 311 -1 338 187 5 215 chr5 105068801 105068909 -98016623 - MIR SINE MIR -96 166 37 448 268 119 21 chr5 105070854 105071048 -98014484 - MIR SINE MIR -42 220 8 361 280 115 40 chr5 105071862 105072164 -98013368 + L1MC4a LINE L1 5576 5773 -586 341 275 7 21 chr5 105072209 105072333 -98013199 + (TA)n Simple_repeat Simple_repeat 2 125 -16 1931 170 24 3 chr5 105072333 105072668 -98012864 + MER2 DNA MER2_type 2 343 -1 341 275 7 21 chr5 105072668 105072685 -98012847 + (TA)n Simple_repeat Simple_repeat 125 141 0 253 192 0 0 chr5 105072685 105072737 -98012795 - L1MC4 LINE L1 -1339 6703 6652 1911 143 55 0 chr5 105072849 105073181 -98012351 + MER47A DNA MER2_type 1 350 -16 185 233 100 17 chr5 105073186 105073246 -98012286 - L3 LINE CR1 -1352 225 161 4808 165 75 10 chr5 105073898 105074141 -98011391 + L1MA6 LINE L1 5237 5463 -837 2182 116 0 10 chr5 105074141 105074443 -98011089 + AluSx SINE Alu 2 300 -12 2405 94 0 0 chr5 105074443 105074752 -98010780 + AluSx SINE Alu 1 309 -3 4808 165 75 10 chr5 105074752 105075489 -98010043 + L1MA6 LINE L1 5462 6279 -21 400 336 22 15 chr5 105075588 105075725 -98009807 + MER5A DNA MER1_type 52 189 0 529 230 171 7 chr5 105075770 105075922 -98009610 + MER5A DNA MER1_type 10 186 -3 2337 103 3 0 chr5 105076029 105076369 -98009163 - AluSq SINE Alu 0 341 1 278 289 15 101 chr5 105076466 105076537 -98008995 - HAL1 LINE L1 -956 1551 1475 2585 201 16 45 chr5 105076537 105077108 -98008424 + MLT2B3 LTR ERVL 1 554 0 278 289 15 101 chr5 105077108 105077282 -98008250 - HAL1 LINE L1 -1032 1475 1340 2228 119 0 3 chr5 105077282 105077593 -98007939 - AluSx SINE Alu -2 310 1 278 289 15 101 chr5 105077593 105077682 -98007850 - HAL1 LINE L1 -1167 1340 1245 335 257 115 0 chr5 105077865 105077978 -98007554 + MLT1D LTR MaLR 1 126 -379 271 326 11 0 chr5 105078805 105078894 -98006638 - L2 LINE L2 -237 3035 2946 5279 179 43 36 chr5 105078904 105081020 -98004512 + L1MB8 LINE L1 3960 6173 -5 2245 95 0 10 chr5 105081102 105081397 -98004135 - AluSc SINE Alu -14 295 4 304 240 27 0 chr5 105082245 105082320 -98003212 + L2 LINE L2 3237 3313 0 864 89 0 0 chr5 105082493 105082616 -98002916 + (GA)n Simple_repeat Simple_repeat 1 123 0 2093 118 0 3 chr5 105082668 105082955 -98002577 - AluSq SINE Alu -27 286 1 353 297 146 0 chr5 105083061 105083214 -98002318 - MIR SINE MIR -60 202 21 213 323 65 25 chr5 105083373 105083574 -98001958 + L2 LINE L2 1875 2083 -1231 17472 39 1 2 chr5 105084337 105086501 -97999031 - L1PA4 LINE L1 -3096 3050 889 18904 37 6 0 chr5 105086501 105089586 -97995946 + L1PA4 LINE L1 3059 6153 -2 279 327 0 0 chr5 105090121 105090231 -97995301 + T-rich Low_complexity Low_complexity 1 110 0 24 32 0 0 chr5 105092292 105092323 -97993209 + AT_rich Low_complexity Low_complexity 1 31 0 212 237 17 34 chr5 105092828 105092887 -97992645 + L2 LINE L2 3195 3252 -61 1005 231 107 43 chr5 105092968 105093213 -97992319 - MER113 DNA MER1_type? -1 520 292 1987 185 6 0 chr5 105093213 105093559 -97991973 - MER7A DNA MER2_type 0 346 1 1005 231 107 43 chr5 105093559 105093664 -97991868 - MER113 DNA MER1_type? -229 292 195 2536 57 0 3 chr5 105093664 105093964 -97991568 + AluY SINE Alu 1 299 -12 1005 231 107 43 chr5 105093964 105094097 -97991435 - MER113 DNA MER1_type? -326 195 5 24 32 0 0 chr5 105094826 105094857 -97990675 + AT_rich Low_complexity Low_complexity 1 31 0 640 199 26 33 chr5 105096625 105096776 -97988756 - MLT1J LTR MaLR -74 437 288 778 196 8 107 chr5 105096783 105096971 -97988561 - MLT1J LTR MaLR -309 171 5 1154 214 43 36 chr5 105097414 105097695 -97987837 - MLT2D LTR ERVL -41 373 91 1979 147 3 0 chr5 105097734 105098020 -97987512 + AluJb SINE Alu 1 287 -25 285 29 0 0 chr5 105098027 105098061 -97987471 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1950 161 0 10 chr5 105099071 105099375 -97986157 - AluJb SINE Alu -11 301 1 919 94 94 35 chr5 105100566 105100737 -97984795 - L1PB1 LINE L1 -1 6150 5970 23 0 0 0 chr5 105100870 105100893 -97984639 + AT_rich Low_complexity Low_complexity 1 23 0 195 398 51 20 chr5 105102422 105102520 -97983012 - L2 LINE L2 -93 3179 3079 210 37 0 0 chr5 105103035 105103062 -97982470 + (GA)n Simple_repeat Simple_repeat 2 28 0 2822 108 19 14 chr5 105103160 105103586 -97981946 + MSTA LTR MaLR 1 428 0 228 338 0 0 chr5 105103777 105103848 -97981684 - L2 LINE L2 -527 2787 2717 2085 85 44 0 chr5 105104047 105104319 -97981213 + AluSg SINE Alu 11 294 -16 183 129 0 0 chr5 105104718 105104749 -97980783 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 240 236 0 0 chr5 105104753 105104808 -97980724 - L1MC4 LINE L1 -1340 6702 6648 706 241 66 0 chr5 105104840 105105006 -97980526 - MIR SINE MIR -73 189 13 907 70 86 0 chr5 105105163 105105291 -97980241 + MER85 DNA T2_type 1 139 0 23 0 0 0 chr5 105105701 105105724 -97979808 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr5 105105902 105105927 -97979605 + (TA)n Simple_repeat Simple_repeat 1 25 0 638 285 12 70 chr5 105105927 105106183 -97979349 + L1MEc LINE L1 36 276 -6120 3532 230 34 41 chr5 105106188 105106499 -97979033 + L1MEc LINE L1 1741 2053 -4162 1039 226 28 0 chr5 105106499 105106711 -97978821 - MER20 DNA MER1_type 0 219 2 3532 230 34 41 chr5 105106711 105107022 -97978510 + L1MEc LINE L1 2053 2365 -3850 1964 92 4 4 chr5 105107022 105107284 -97978248 - AluY SINE Alu -11 300 39 3532 230 34 41 chr5 105107284 105107890 -97977642 + L1MEc LINE L1 2365 2928 -3287 2463 73 0 3 chr5 105107890 105108193 -97977339 - AluY SINE Alu -9 302 1 3532 230 34 41 chr5 105108193 105108623 -97976909 + L1MEc LINE L1 2928 3359 -2856 376 265 97 88 chr5 105108791 105109213 -97976319 - LTR68 LTR ERV1 -308 432 7 2909 215 53 17 chr5 105109221 105110095 -97975437 + L1MEc LINE L1 3373 4277 -1938 273 149 0 0 chr5 105110132 105110179 -97975353 + L1PA12 LINE L1 6120 6166 -2 398 205 12 0 chr5 105110277 105110371 -97975161 + L1M4 LINE L1 4170 4265 -1881 615 253 30 18 chr5 105110371 105110537 -97974995 + MLT1E2 LTR MaLR 457 624 -2 343 250 22 22 chr5 105110538 105110630 -97974902 + MER5A DNA MER1_type 91 182 -7 280 347 94 40 chr5 105110804 105111081 -97974451 - L3b LINE CR1 -47 1536 1245 494 297 94 9 chr5 105111340 105111552 -97973980 + MLT1L LTR MaLR 353 582 -33 265 52 0 172 chr5 105111888 105111946 -97973586 - MADE1 DNA Mariner 0 80 33 27 73 0 0 chr5 105114614 105114669 -97970863 + AT_rich Low_complexity Low_complexity 1 55 0 196 400 210 0 chr5 105115105 105115205 -97970327 + L2 LINE L2 3137 3257 -15 213 39 0 0 chr5 105115460 105115486 -97970046 + (TC)n Simple_repeat Simple_repeat 1 26 0 186 313 0 31 chr5 105115630 105115694 -97969838 - L2 LINE L2 0 3313 3252 1458 234 46 37 chr5 105117020 105117474 -97968058 + L1ME1 LINE L1 5704 6161 -5 304 309 124 88 chr5 105118011 105118487 -97967045 - L2 LINE L2 -428 2886 2394 488 273 80 21 chr5 105118493 105118680 -97966852 + LTR40a LTR ERVL 1 198 -321 299 183 0 0 chr5 105118726 105118786 -97966746 + L1ME LINE L1 5726 5785 -379 2844 196 27 17 chr5 105118803 105119400 -97966132 + L1P LINE L1 37 639 -5507 2022 72 33 4 chr5 105119567 105119875 -97965657 - AluSx SINE Alu 0 316 1 567 218 47 18 chr5 105120211 105120381 -97965151 - MER104 DNA Tc2 -3 177 3 27 62 0 0 chr5 105120992 105121040 -97964492 + AT_rich Low_complexity Low_complexity 1 48 0 480 295 224 16 chr5 105121241 105121475 -97964057 - L1MC4a LINE L1 -1940 5868 5684 402 21 0 0 chr5 105121475 105121522 -97964010 + (TA)n Simple_repeat Simple_repeat 2 48 0 480 295 224 16 chr5 105121522 105121795 -97963737 - L1MC4a LINE L1 -2124 5684 5255 913 179 6 6 chr5 105122120 105122276 -97963256 + FRAM SINE Alu 1 153 -23 794 195 27 0 chr5 105123787 105123936 -97961596 + MER58B DNA MER1_type 173 325 -16 26 0 0 0 chr5 105124715 105124741 -97960791 + AT_rich Low_complexity Low_complexity 1 26 0 289 296 9 61 chr5 105125536 105125651 -97959881 - MER5B DNA MER1_type -7 171 63 189 0 0 0 chr5 105126471 105126492 -97959040 + (T)n Simple_repeat Simple_repeat 1 21 0 355 249 213 27 chr5 105129390 105129610 -97955922 - MIR SINE MIR -7 255 1 2340 73 7 0 chr5 105129679 105129980 -97955552 + AluSq SINE Alu 5 307 -6 233 304 116 89 chr5 105130341 105130791 -97954741 - L3 LINE CR1 0 1577 1116 574 235 94 66 chr5 105130826 105131039 -97954493 + LTR34 LTR ERV1 473 691 -8 389 152 89 0 chr5 105131360 105131439 -97954093 - Tigger5 DNA MER2_type 0 2323 2238 359 143 0 18 chr5 105131450 105131506 -97954026 - Tigger5 DNA MER2_type -2268 55 1 195 301 44 0 chr5 105131712 105131797 -97953735 - MIR SINE MIR -63 145 79 186 71 0 0 chr5 105133910 105133938 -97951594 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 274 338 31 25 chr5 105134080 105134240 -97951292 + L3b LINE CR1 1305 1465 -118 241 323 35 75 chr5 105134320 105134521 -97951011 + L2 LINE L2 2809 3001 -271 21 36 0 0 chr5 105134655 105134683 -97950849 + AT_rich Low_complexity Low_complexity 1 28 0 955 232 46 79 chr5 105135975 105136342 -97949190 - L2 LINE L2 -9 3304 2950 1087 284 173 65 chr5 105136857 105138368 -97947164 - L2 LINE L2 -1604 1710 38 192 352 0 0 chr5 105138912 105138966 -97946566 - L2 LINE L2 -32 3240 3187 1967 163 51 20 chr5 105139055 105139447 -97946085 - MER65C LTR ERV1 -48 413 10 227 271 250 0 chr5 105140100 105140196 -97945336 - MIR3 SINE MIR -52 156 37 23 0 0 0 chr5 105140758 105140781 -97944751 + AT_rich Low_complexity Low_complexity 1 23 0 752 127 22 0 chr5 105141188 105141322 -97944210 + L1MA9 LINE L1 6166 6302 -10 2014 119 10 7 chr5 105142603 105142896 -97942636 - AluSx SINE Alu -18 294 1 2255 92 3 0 chr5 105142929 105143234 -97942298 + AluSp SINE Alu 2 307 0 24 53 0 0 chr5 105143255 105143293 -97942239 + AT_rich Low_complexity Low_complexity 1 38 0 571 133 105 0 chr5 105143583 105143726 -97941806 - L1MC/D LINE L1 -2555 5440 5283 3858 79 25 108 chr5 105143734 105144339 -97941193 - L1PB1 LINE L1 -1 6150 5615 2183 117 3 3 chr5 105144339 105144639 -97940893 - AluSx SINE Alu -12 300 1 3858 79 25 108 chr5 105144639 105144765 -97940767 - L1PB1 LINE L1 -536 5615 5480 217 238 0 0 chr5 105145493 105145535 -97939997 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 371 241 0 0 chr5 105145536 105145615 -97939917 - L2 LINE L2 0 3313 3235 345 258 93 43 chr5 105146330 105146604 -97938928 + MARNA DNA Mariner 172 517 -69 2536 36 10 0 chr5 105148387 105148689 -97936843 + AluY SINE Alu 1 305 -6 2467 212 122 66 chr5 105150009 105150537 -97934995 + L1MC5 LINE L1 6745 7242 -719 1882 133 38 14 chr5 105150537 105150830 -97934702 + AluSx SINE Alu 1 300 -12 2467 212 122 66 chr5 105150830 105151452 -97934080 + L1MC5 LINE L1 7242 7914 -47 1231 154 3 77 chr5 105152119 105152443 -97933089 + AluSx SINE Alu 1 300 -2 625 162 0 0 chr5 105155619 105155718 -97929814 - U6 snRNA snRNA -8 99 1 519 276 11 23 chr5 105156311 105156485 -97929047 - MIR SINE MIR -18 244 73 353 329 43 61 chr5 105156709 105156873 -97928659 + MIR3 SINE MIR 34 194 -14 326 219 24 12 chr5 105157082 105157164 -97928368 - MER5A DNA MER1_type -106 83 1 31 58 0 0 chr5 105157202 105157254 -97928278 + AT_rich Low_complexity Low_complexity 1 52 0 1585 178 66 14 chr5 105157579 105157866 -97927666 + AluJo SINE Alu 1 302 -10 30 0 0 0 chr5 105158640 105158670 -97926862 + AT_rich Low_complexity Low_complexity 1 30 0 358 352 44 0 chr5 105158893 105159052 -97926480 + MIR SINE MIR 59 224 -38 308 296 240 34 chr5 105159177 105159356 -97926176 + MIR SINE MIR 41 256 -6 2107 113 3 13 chr5 105159633 105159942 -97925590 - AluY SINE Alu -5 306 1 4311 106 30 32 chr5 105160189 105160880 -97924652 - LTR8 LTR ERV1 -1 690 1 1748 131 12 17 chr5 105161495 105161837 -97923695 + MER61C LTR ERV1 1 434 0 1126 283 82 22 chr5 105162228 105162681 -97922851 - L2 LINE L2 0 3313 2834 309 323 32 0 chr5 105164319 105164443 -97921089 + L3 LINE CR1 1173 1300 -277 269 254 127 32 chr5 105164605 105164731 -97920801 + L3 LINE CR1 1277 1414 -163 2346 76 0 13 chr5 105165234 105165538 -97919994 - AluSg SINE Alu -10 300 1 2220 101 0 14 chr5 105166054 105166351 -97919181 - AluSq SINE Alu -20 293 1 2029 81 3 97 chr5 105166723 105167043 -97918489 - AluSg SINE Alu -20 290 1 193 269 34 94 chr5 105167389 105167538 -97917994 - MIR SINE MIR -9 253 114 328 317 49 36 chr5 105168821 105168965 -97916567 - MER20B DNA MER1_type -22 197 52 23 92 0 0 chr5 105171066 105171131 -97914401 + AT_rich Low_complexity Low_complexity 1 65 0 2263 117 99 10 chr5 105171558 105171951 -97913581 - MSTA LTR MaLR 0 428 1 2598 40 0 0 chr5 105172175 105172472 -97913060 + AluY SINE Alu 1 297 -14 22 0 0 0 chr5 105174034 105174056 -97911476 + AT_rich Low_complexity Low_complexity 1 22 0 494 318 14 0 chr5 105174430 105174578 -97910954 - L1MEd LINE L1 -5448 671 522 353 292 77 99 chr5 105174620 105174782 -97910750 - L1MEd LINE L1 -5738 381 228 2281 104 0 7 chr5 105174782 105175089 -97910443 + AluSx SINE Alu 1 305 -7 353 292 77 99 chr5 105175089 105175238 -97910294 - L1MEd LINE L1 -5891 228 77 482 285 146 6 chr5 105175239 105175397 -97910135 - MER5A DNA MER1_type 0 189 10 38 39 0 0 chr5 105177258 105177310 -97908222 + AT_rich Low_complexity Low_complexity 1 52 0 269 275 134 74 chr5 105178350 105178410 -97907122 - MIR3 SINE MIR -6 202 147 2850 6 0 3 chr5 105178410 105178722 -97906810 - AluYa5 SINE Alu 0 311 1 269 275 134 74 chr5 105178722 105178810 -97906722 - MIR3 SINE MIR -61 147 45 2460 64 0 3 chr5 105180279 105180576 -97904956 + AluY SINE Alu 1 296 -15 344 146 39 0 chr5 105180576 105180679 -97904853 + (TA)n Simple_repeat Simple_repeat 1 107 0 21 36 0 0 chr5 105181180 105181208 -97904324 + AT_rich Low_complexity Low_complexity 1 28 0 2007 171 56 21 chr5 105181300 105181786 -97903746 - L1MCa LINE L1 -3947 2479 1977 * 1262 183 175 8 chr5 105181791 105182042 -97903490 - AluJo SINE Alu -19 293 1 14920 191 40 9 chr5 105182042 105183728 -97901804 - L1 LINE L1 -3879 2969 1149 2973 86 40 7 chr5 105183728 105184158 -97901374 - MLT2A1 LTR ERVL 0 444 1 14920 191 40 9 chr5 105184158 105185335 -97900197 - L1 LINE L1 -5699 1149 10 890 255 108 10 chr5 105185353 105185659 -97899873 + L1M4 LINE L1 3536 3871 -2275 724 224 47 80 chr5 105185662 105185961 -97899571 + L1ME1 LINE L1 5873 6161 -5 2001 160 0 0 chr5 105186431 105186737 -97898795 + AluJo SINE Alu 1 306 -6 533 291 52 39 chr5 105186791 105187021 -97898511 - MIR SINE MIR -1 261 29 1678 231 120 46 chr5 105187165 105187993 -97897539 - L1M4 LINE L1 -1512 4634 3746 355 228 54 0 chr5 105189686 105189778 -97895754 - MIR SINE MIR 0 262 166 224 227 0 0 chr5 105189898 105189942 -97895590 + MIR SINE MIR 59 102 -160 263 309 21 10 chr5 105190371 105190468 -97895064 + L1PA12 LINE L1 2085 2182 -5399 3248 235 43 49 chr5 105190712 105190986 -97894546 + L1PA12 LINE L1 2182 2456 -5128 2604 107 51 10 chr5 105190986 105191397 -97894135 - MSTA LTR MaLR 0 428 1 3248 235 43 49 chr5 105191397 105192337 -97893195 + L1PA12 LINE L1 2456 3387 -4197 4919 118 70 24 chr5 105192337 105193053 -97892479 + L1PA16 LINE L1 4771 5453 -713 1704 184 20 7 chr5 105193053 105193357 -97892175 + AluJb SINE Alu 1 308 -4 4919 118 70 24 chr5 105193357 105193994 -97891538 + L1PA16 LINE L1 5453 6166 0 766 188 113 0 chr5 105194611 105194771 -97890761 + MER45A DNA AcHobo 1 178 0 2542 40 0 3 chr5 105196396 105196694 -97888838 + AluY SINE Alu 1 297 -14 359 314 29 35 chr5 105197057 105197229 -97888303 + L3 LINE CR1 800 970 -607 394 326 44 0 chr5 105198397 105198532 -97887000 + MIR SINE MIR 122 262 0 521 135 0 0 chr5 105199203 105199277 -97886255 + Tigger4(Zombi) DNA MER2_type 1 74 -2657 1557 238 28 45 chr5 105200717 105201187 -97884345 + LTR40b LTR ERVL 1 462 0 2074 122 3 16 chr5 105201459 105201763 -97883769 + AluSx SINE Alu 1 300 -12 222 349 9 57 chr5 105203165 105203271 -97882261 + MER5A DNA MER1_type 88 188 -1 2425 85 0 7 chr5 105204005 105204310 -97881222 - AluSp SINE Alu -10 303 1 21 57 0 0 chr5 105205774 105205809 -97879723 + AT_rich Low_complexity Low_complexity 1 35 0 334 202 191 0 chr5 105205859 105205943 -97879589 + MLT1D LTR MaLR 1 100 -405 2249 32 46 11 chr5 105206535 105206815 -97878717 - AluY SINE Alu -13 298 9 238 242 210 73 chr5 105207766 105207890 -97877642 - MIR SINE MIR -17 245 105 542 276 241 0 chr5 105209227 105209430 -97876102 + MIR SINE MIR 1 252 -10 489 254 59 0 chr5 105209449 105209567 -97875965 - MIR SINE MIR -92 170 46 491 306 25 0 chr5 105210412 105210572 -97874960 + L2 LINE L2 2212 2375 -939 521 289 22 109 chr5 105210582 105210939 -97874593 + L2 LINE L2 2636 2961 -353 374 290 0 9 chr5 105211196 105211303 -97874229 + L2 LINE L2 3158 3263 -50 369 0 0 0 chr5 105211387 105211428 -97874104 + (TG)n Simple_repeat Simple_repeat 2 42 0 3559 142 63 36 chr5 105211793 105212908 -97872624 - L1MA9 LINE L1 -38 6274 5043 1408 192 211 36 chr5 105213270 105213635 -97871897 + MER69 DNA AcHobo 1 429 -797 31 58 0 0 chr5 105214133 105214185 -97871347 + AT_rich Low_complexity Low_complexity 1 52 0 257 267 47 0 chr5 105214310 105214396 -97871136 - L1ME4a LINE L1 -187 5934 5845 23 33 0 0 chr5 105215084 105215114 -97870418 + AT_rich Low_complexity Low_complexity 1 30 0 324 0 0 0 chr5 105215249 105215285 -97870247 + (A)n Simple_repeat Simple_repeat 1 36 0 2831 83 72 12 chr5 105215671 105216090 -97869442 + MLT2A1 LTR ERVL 1 444 0 240 300 8 33 chr5 105216703 105216823 -97868709 + GA-rich Low_complexity Low_complexity 3 119 0 560 265 15 0 chr5 105216915 105217058 -97868474 - MIR SINE MIR -62 146 45 553 306 126 5 chr5 105217481 105217703 -97867829 + MIR SINE MIR 3 251 -11 221 267 30 50 chr5 105218503 105218604 -97866928 - MIR3 SINE MIR -6 202 104 210 369 135 0 chr5 105220009 105220120 -97865412 + L2 LINE L2 3147 3272 0 2322 55 3 70 chr5 105220832 105221160 -97864372 + AluY SINE Alu 1 306 -5 198 236 0 0 chr5 105221947 105222002 -97863530 + CT-rich Low_complexity Low_complexity 3 57 0 26 0 0 0 chr5 105223065 105223091 -97862441 + AT_rich Low_complexity Low_complexity 1 26 0 14571 216 24 13 chr5 105223681 105227324 -97858208 - L1PA16 LINE L1 -17 7587 3857 2169 86 4 4 chr5 105227324 105227641 -97857891 - AluY SINE Alu 0 317 1 14571 216 24 13 chr5 105227641 105229314 -97856218 - L1PA16 LINE L1 -3747 3857 2203 871 343 25 8 chr5 105229975 105230374 -97855158 - L1PA16 LINE L1 -7166 415 10 2339 129 41 59 chr5 105231027 105231239 -97854293 - Tigger2a DNA MER2_type -2274 434 220 1816 138 33 0 chr5 105231239 105231386 -97854146 - AluSx SINE Alu -27 285 144 225 0 0 0 chr5 105231386 105231411 -97854121 + (TA)n Simple_repeat Simple_repeat 1 25 0 1816 138 33 0 chr5 105231411 105231539 -97853993 - AluSx SINE Alu -168 144 1 2339 129 41 59 chr5 105231539 105231768 -97853764 - Tigger2a DNA MER2_type -2488 220 1 1735 150 79 20 chr5 105233317 105233671 -97851861 + THE1C LTR MaLR 1 375 0 274 329 0 12 chr5 105234661 105234746 -97850786 + MIR3 SINE MIR 111 194 -14 34 72 0 0 chr5 105235007 105235076 -97850456 + AT_rich Low_complexity Low_complexity 1 69 0 1309 248 96 65 chr5 105235980 105236552 -97848980 + MLT1E LTR MaLR 1 590 -3 189 273 0 0 chr5 105237754 105237798 -97847734 - MIR SINE MIR -133 129 86 1185 196 23 0 chr5 105238010 105238229 -97847303 + MER58A DNA MER1_type 1 224 0 1674 130 63 46 chr5 105238905 105239189 -97846343 + AluJb SINE Alu 7 295 -17 27 29 0 0 chr5 105239191 105239225 -97846307 + AT_rich Low_complexity Low_complexity 1 34 0 216 303 22 56 chr5 105239736 105239821 -97845711 - L2 LINE L2 -9 3263 3182 266 314 136 24 chr5 105239821 105239990 -97845542 + MER5A DNA MER1_type 1 188 -1 345 320 156 32 chr5 105240055 105240520 -97845012 - L2 LINE L2 -189 3083 2572 301 213 133 0 chr5 105240666 105240741 -97844791 - MIR SINE MIR 0 262 178 22 35 0 0 chr5 105240757 105240786 -97844746 + AT_rich Low_complexity Low_complexity 1 29 0 5839 132 32 7 chr5 105240788 105241982 -97843550 + L1MA7 LINE L1 5068 6291 0 628 197 7 44 chr5 105241991 105242128 -97843404 - MIR SINE MIR -128 134 3 319 307 115 26 chr5 105242212 105242404 -97843128 - L2 LINE L2 -966 2348 2140 27 49 0 0 chr5 105243268 105243309 -97842223 + AT_rich Low_complexity Low_complexity 1 41 0 204 245 0 0 chr5 105243465 105243514 -97842018 + L2 LINE L2 3208 3256 -16 294 266 75 32 chr5 105244014 105244108 -97841424 + MIR3 SINE MIR 66 163 -45 575 124 22 195 chr5 105244784 105245010 -97840522 - MER53 DNA DNA -1 188 2 653 287 149 37 chr5 105245035 105245383 -97840149 - MLT1J2 LTR MaLR -6 440 54 308 93 0 0 chr5 105245520 105245563 -97839969 - MADE1 DNA Mariner -37 43 1 2456 64 3 0 chr5 105246826 105247122 -97838410 - AluY SINE Alu -14 297 1 37080 54 8 4 chr5 105247173 105252706 -97832826 - L1PA5 LINE L1 -1 6153 607 232 224 0 0 chr5 105252934 105252983 -97832549 + L2 LINE L2 3264 3312 -1 897 235 101 123 chr5 105253912 105254830 -97830702 + HAL1 LINE L1 778 1675 -832 762 250 14 19 chr5 105254834 105255046 -97830486 + MIR SINE MIR 52 262 0 212 250 156 16 chr5 105256428 105256492 -97829040 - L2 LINE L2 -9 3304 3232 2060 133 0 0 chr5 105256498 105256783 -97828749 + AluSx SINE Alu 1 285 -27 1233 164 78 43 chr5 105256856 105257112 -97828420 + AluJb SINE Alu 36 300 -12 1352 68 0 0 chr5 105257128 105257290 -97828242 - AluY SINE Alu -20 291 130 237 161 54 18 chr5 105257345 105257401 -97828131 - MLT2D LTR ERVL -8 406 349 25 31 0 0 chr5 105257401 105257433 -97828099 + AT_rich Low_complexity Low_complexity 1 32 0 384 253 10 10 chr5 105257456 105257555 -97827977 - MLT2D LTR ERVL -48 366 268 240 282 0 0 chr5 105257633 105257704 -97827828 - Tigger3(Golem) DNA MER2_type -1518 1511 1441 1027 140 149 32 chr5 105257814 105258035 -97827497 - Tigger6 DNA MER2_type -1270 327 81 496 362 41 8 chr5 105258038 105258284 -97827248 - L2 LINE L2 -1102 2212 1959 9743 131 151 36 chr5 105258290 105258622 -97826910 + L1PBa LINE L1 753 1045 -5817 377 132 0 0 chr5 105258622 105258675 -97826857 - AluS SINE Alu -19 282 230 9743 131 151 36 chr5 105258675 105260521 -97825011 + L1PBa LINE L1 1045 3319 -3543 2686 292 83 32 chr5 105260538 105261827 -97823705 + L2 LINE L2 1793 3154 -159 4998 204 22 6 chr5 105261874 105262935 -97822597 + Tigger6a DNA MER2_type 2 1079 -4 1565 213 44 101 chr5 105262959 105263036 -97822496 + L1MD2 LINE L1 4675 4755 -1409 1943 98 4 15 chr5 105263036 105263300 -97822232 + AluY SINE Alu 40 300 -11 1565 213 44 101 chr5 105263300 105264170 -97821362 + L1MD2 LINE L1 4755 5569 -595 2061 55 0 0 chr5 105264170 105264424 -97821108 + L1PA7 LINE L1 5901 6154 0 1565 213 44 101 chr5 105264424 105264541 -97820991 + L1MD2 LINE L1 5569 5691 -473 2290 201 149 128 chr5 105264553 105264660 -97820872 + L1ME1 LINE L1 3474 3577 -2569 3554 145 22 75 chr5 105264660 105265390 -97820142 + LTR8 LTR ERV1 1 691 0 2290 201 149 128 chr5 105265390 105265756 -97819776 + L1ME1 LINE L1 3577 3934 -2212 1494 136 9 0 chr5 105265756 105265969 -97819563 + AluSx SINE Alu 1 215 -97 2031 116 22 0 chr5 105265970 105266269 -97819263 + AluSg SINE Alu 1 305 0 660 130 0 9 chr5 105266270 105266378 -97819154 + AluSx SINE Alu 203 309 -3 2290 201 149 128 chr5 105266378 105267164 -97818368 + L1ME1 LINE L1 3933 4874 -1272 5303 84 55 10 chr5 105267168 105267654 -97817878 + L1MA2 LINE L1 5457 5996 -308 2086 127 0 3 chr5 105267654 105267953 -97817579 - AluY SINE Alu -12 299 2 5303 84 55 10 chr5 105267953 105268277 -97817255 + L1MA2 LINE L1 5996 6304 0 2554 195 36 45 chr5 105268295 105268766 -97816766 + L1ME1 LINE L1 5272 5713 -453 2499 180 56 4 chr5 105268766 105269266 -97816266 + L1MD2 LINE L1 5819 6344 -15 2554 195 36 45 chr5 105269266 105269711 -97815821 + L1ME1 LINE L1 5713 6160 -6 373 127 99 0 chr5 105271490 105271561 -97813971 - L1MA3 LINE L1 -195 6110 6033 21 36 0 0 chr5 105273578 105273606 -97811926 + AT_rich Low_complexity Low_complexity 1 28 0 338 187 5 215 chr5 105274083 105274183 -97811349 - MIR SINE MIR -61 201 166 1606 162 49 39 chr5 105274183 105274491 -97811041 + AluJo SINE Alu 1 311 -1 338 187 5 215 chr5 105274491 105274599 -97810933 - MIR SINE MIR -96 166 37 448 268 119 21 chr5 105276544 105276738 -97808794 - MIR SINE MIR -42 220 8 361 280 115 40 chr5 105277552 105277854 -97807678 + L1MC4a LINE L1 5576 5773 -586 341 275 7 21 chr5 105277899 105278023 -97807509 + (TA)n Simple_repeat Simple_repeat 2 125 -16 1931 170 24 3 chr5 105278023 105278358 -97807174 + MER2 DNA MER2_type 2 343 -1 341 275 7 21 chr5 105278358 105278375 -97807157 + (TA)n Simple_repeat Simple_repeat 125 141 0 253 192 0 0 chr5 105278375 105278427 -97807105 - L1MC4 LINE L1 -1339 6703 6652 1911 143 55 0 chr5 105278539 105278871 -97806661 + MER47A DNA MER2_type 1 350 -16 185 233 100 17 chr5 105278876 105278936 -97806596 - L3 LINE CR1 -1352 225 161 4808 165 75 10 chr5 105279588 105279831 -97805701 + L1MA6 LINE L1 5237 5463 -837 2182 116 0 10 chr5 105279831 105280133 -97805399 + AluSx SINE Alu 2 300 -12 2308 110 0 0 chr5 105280133 105280442 -97805090 + AluSx SINE Alu 1 309 -3 4808 165 75 10 chr5 105280442 105281179 -97804353 + L1MA6 LINE L1 5462 6279 -21 400 336 22 15 chr5 105281278 105281415 -97804117 + MER5A DNA MER1_type 52 189 0 529 230 171 7 chr5 105281460 105281612 -97803920 + MER5A DNA MER1_type 10 186 -3 2337 103 3 0 chr5 105281726 105282038 -97803494 - AluSq SINE Alu 0 313 1 278 289 15 101 chr5 105282135 105282206 -97803326 - HAL1 LINE L1 -956 1551 1475 2585 201 16 45 chr5 105282206 105282777 -97802755 + MLT2B3 LTR ERVL 1 554 0 278 289 15 101 chr5 105282777 105282951 -97802581 - HAL1 LINE L1 -1032 1475 1340 2216 122 0 3 chr5 105282951 105283262 -97802270 - AluSx SINE Alu -2 310 1 278 289 15 101 chr5 105283262 105283351 -97802181 - HAL1 LINE L1 -1167 1340 1245 335 257 115 0 chr5 105283534 105283647 -97801885 + MLT1D LTR MaLR 1 126 -379 271 326 11 0 chr5 105284474 105284563 -97800969 - L2 LINE L2 -237 3035 2946 5249 179 43 36 chr5 105284573 105286690 -97798842 + L1MB8 LINE L1 3960 6173 -5 2245 95 0 10 chr5 105286772 105287067 -97798465 - AluSc SINE Alu -14 295 4 304 240 27 0 chr5 105287915 105287990 -97797542 + L2 LINE L2 3237 3313 0 864 89 0 0 chr5 105288163 105288286 -97797246 + (GA)n Simple_repeat Simple_repeat 1 123 0 2093 118 0 3 chr5 105288338 105288625 -97796907 - AluSq SINE Alu -27 286 1 353 297 146 0 chr5 105288731 105288884 -97796648 - MIR SINE MIR -60 202 21 213 323 65 25 chr5 105289043 105289244 -97796288 + L2 LINE L2 1875 2083 -1231 17488 39 1 2 chr5 105290007 105292171 -97793361 - L1PA3 LINE L1 -3096 3050 889 18904 37 0 2 chr5 105292171 105295265 -97790267 + L1PA3 LINE L1 3059 6155 0 24 0 0 0 chr5 105296349 105296373 -97789159 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 105298828 105298852 -97786680 + AT_rich Low_complexity Low_complexity 1 24 0 9685 139 30 13 chr5 105300163 105302891 -97782641 - L1MA3 LINE L1 0 6305 3543 5022 92 24 44 chr5 105302890 105303718 -97781814 + L1PB1 LINE L1 5234 6044 -107 * 847 125 20 3 chr5 105303711 105303869 -97781663 + L1M1 LINE L1 5651 5805 -360 * 495 138 3 11 chr5 105303887 105303979 -97781553 + L1PB1 LINE L1 5767 5859 -292 482 134 12 0 chr5 105303984 105304066 -97781466 - L1 LINE L1 -1537 6028 5946 743 83 0 0 chr5 105304073 105304181 -97781351 + L1PB1 LINE L1 6044 6151 0 22064 155 19 16 chr5 105304190 105305916 -97779616 - L1 LINE L1 -2587 4978 3258 1797 117 12 0 chr5 105305916 105306187 -97779345 - AluSx SINE Alu 0 305 32 22064 155 19 16 chr5 105306187 105309411 -97776121 - L1 LINE L1 -4307 3258 13 14037 35 6 0 chr5 105309425 105311886 -97773646 + L1PA4 LINE L1 3686 6153 -2 279 327 0 0 chr5 105312421 105312531 -97773001 + T-rich Low_complexity Low_complexity 1 110 0 24 32 0 0 chr5 105314592 105314623 -97770909 + AT_rich Low_complexity Low_complexity 1 31 0 212 237 17 34 chr5 105315128 105315187 -97770345 + L2 LINE L2 3195 3252 -61 1005 231 107 43 chr5 105315268 105315513 -97770019 - MER113 DNA MER1_type? -1 520 292 1987 185 6 0 chr5 105315513 105315859 -97769673 - MER7A DNA MER2_type 0 346 1 1005 231 107 43 chr5 105315859 105315964 -97769568 - MER113 DNA MER1_type? -229 292 195 2536 57 0 3 chr5 105315964 105316264 -97769268 + AluY SINE Alu 1 299 -12 1005 231 107 43 chr5 105316264 105316397 -97769135 - MER113 DNA MER1_type? -326 195 5 24 32 0 0 chr5 105317126 105317157 -97768375 + AT_rich Low_complexity Low_complexity 1 31 0 640 199 26 33 chr5 105318925 105319076 -97766456 - MLT1J LTR MaLR -74 437 288 778 196 8 107 chr5 105319083 105319271 -97766261 - MLT1J LTR MaLR -309 171 5 1154 214 43 36 chr5 105319714 105319995 -97765537 - MLT2D LTR ERVL -41 373 91 1979 147 3 0 chr5 105320034 105320320 -97765212 + AluJb SINE Alu 1 287 -25 285 29 0 0 chr5 105320327 105320361 -97765171 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1942 162 0 10 chr5 105321371 105321674 -97763858 - AluJb SINE Alu -12 300 1 919 94 94 35 chr5 105322865 105323036 -97762496 - L1PB1 LINE L1 -1 6150 5970 23 0 0 0 chr5 105323169 105323192 -97762340 + AT_rich Low_complexity Low_complexity 1 23 0 195 398 51 20 chr5 105324721 105324819 -97760713 - L2 LINE L2 -93 3179 3079 246 32 0 0 chr5 105325334 105325365 -97760167 + (GA)n Simple_repeat Simple_repeat 2 32 0 2822 108 19 14 chr5 105325463 105325889 -97759643 + MSTA LTR MaLR 1 428 0 228 338 0 0 chr5 105326080 105326151 -97759381 - L2 LINE L2 -527 2787 2717 2085 85 44 0 chr5 105326350 105326622 -97758910 + AluSg SINE Alu 11 294 -16 183 129 0 0 chr5 105327021 105327052 -97758480 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 240 236 0 0 chr5 105327056 105327111 -97758421 - L1MC4 LINE L1 -1340 6702 6648 706 241 66 0 chr5 105327143 105327309 -97758223 - MIR SINE MIR -73 189 13 907 70 86 0 chr5 105327466 105327594 -97757938 + MER85 DNA T2_type 1 139 0 23 0 0 0 chr5 105328004 105328027 -97757505 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr5 105328205 105328230 -97757302 + (TA)n Simple_repeat Simple_repeat 2 26 0 638 285 12 70 chr5 105328230 105328486 -97757046 + L1MEc LINE L1 36 276 -6120 3532 229 34 41 chr5 105328491 105328802 -97756730 + L1MEc LINE L1 1741 2053 -4162 1039 226 28 0 chr5 105328802 105329014 -97756518 - MER20 DNA MER1_type 0 219 2 3532 229 34 41 chr5 105329014 105329325 -97756207 + L1MEc LINE L1 2053 2365 -3850 1964 92 4 4 chr5 105329325 105329587 -97755945 - AluY SINE Alu -11 300 39 3532 229 34 41 chr5 105329587 105330193 -97755339 + L1MEc LINE L1 2365 2928 -3287 2463 73 0 3 chr5 105330193 105330496 -97755036 - AluY SINE Alu -9 302 1 3532 229 34 41 chr5 105330496 105330926 -97754606 + L1MEc LINE L1 2928 3359 -2856 376 265 97 88 chr5 105331094 105331516 -97754016 - LTR68 LTR ERV1 -308 432 7 2909 215 53 17 chr5 105331524 105332398 -97753134 + L1MEc LINE L1 3373 4277 -1938 273 149 0 0 chr5 105332435 105332482 -97753050 + L1PA12 LINE L1 6120 6166 -2 398 205 12 0 chr5 105332580 105332674 -97752858 + L1M4 LINE L1 4170 4265 -1881 615 253 30 18 chr5 105332674 105332840 -97752692 + MLT1E2 LTR MaLR 457 624 -2 343 250 22 22 chr5 105332841 105332933 -97752599 + MER5A DNA MER1_type 91 182 -7 280 347 94 40 chr5 105333107 105333384 -97752148 - L3b LINE CR1 -47 1536 1245 494 297 94 9 chr5 105333643 105333855 -97751677 + MLT1L LTR MaLR 353 582 -33 265 52 0 172 chr5 105334191 105334249 -97751283 - MADE1 DNA Mariner 0 80 33 27 73 0 0 chr5 105336917 105336972 -97748560 + AT_rich Low_complexity Low_complexity 1 55 0 196 400 210 0 chr5 105337408 105337508 -97748024 + L2 LINE L2 3137 3257 -15 213 39 0 0 chr5 105337763 105337789 -97747743 + (TC)n Simple_repeat Simple_repeat 1 26 0 186 313 0 31 chr5 105337933 105337997 -97747535 - L2 LINE L2 0 3313 3252 1458 234 46 37 chr5 105339323 105339777 -97745755 + L1ME1 LINE L1 5704 6161 -5 331 309 124 86 chr5 105340314 105340789 -97744743 - L2 LINE L2 -428 2886 2394 488 273 80 21 chr5 105340795 105340982 -97744550 + LTR40a LTR ERVL 1 198 -321 299 183 0 0 chr5 105341028 105341088 -97744444 + L1ME LINE L1 5726 5785 -379 15115 125 33 22 chr5 105341105 105343619 -97741913 + L1PA6 LINE L1 37 2577 -3569 9039 70 2 2 chr5 105343614 105344831 -97740701 - L1P LINE L1 -2350 3796 2579 * 10812 67 7 1 chr5 105344831 105347032 -97738500 + L1PA6 LINE L1 3922 6148 -6 1197 260 57 0 chr5 105347057 105347357 -97738175 + LTR40b LTR ERVL 146 462 0 427 362 31 18 chr5 105347379 105347603 -97737929 + MIR SINE MIR 4 230 -32 726 315 122 38 chr5 105347811 105348315 -97737217 - L2 LINE L2 -1 3312 2762 906 222 31 73 chr5 105348568 105348766 -97736766 - MIR SINE MIR 0 262 76 4039 123 25 24 chr5 105348766 105349473 -97736059 - MER67C LTR ERV1 0 710 3 906 222 31 73 chr5 105349473 105349535 -97735997 - MIR SINE MIR -186 76 13 809 241 65 26 chr5 105351121 105351353 -97734179 - MIR SINE MIR -8 254 14 475 198 163 70 chr5 105351759 105351986 -97733546 - MER112 DNA MER1_type -12 248 1 366 299 47 0 chr5 105352084 105352191 -97733341 + L2 LINE L2 3156 3267 -5 272 264 0 14 chr5 105353024 105353096 -97732436 + GA-rich Low_complexity Low_complexity 2 72 0 844 226 81 0 chr5 105353337 105353571 -97731961 + LTR33A LTR ERVL 269 521 -2 24 32 0 0 chr5 105354205 105354236 -97731296 + AT_rich Low_complexity Low_complexity 1 31 0 5583 153 34 20 chr5 105354484 105354660 -97730872 + L1MC3 LINE L1 6689 6861 -924 471 35 0 0 chr5 105354660 105354717 -97730815 + (CA)n Simple_repeat Simple_repeat 2 58 0 5583 153 34 20 chr5 105354717 105355615 -97729917 + L1MC3 LINE L1 6861 7777 -8 7313 58 1 4 chr5 105355656 105357062 -97728470 + HERVL66 LTR ERVL 2807 4328 -1 4407 79 5 24 chr5 105357063 105357685 -97727847 + LTR66 LTR ERVL 1 610 0 362 271 33 7 chr5 105357707 105357858 -97727674 - L1ME LINE L1 -333 5788 5634 652 255 88 50 chr5 105358650 105359034 -97726498 - LTR16A LTR ERVL -30 420 22 28 0 0 0 chr5 105359667 105359695 -97725837 + AT_rich Low_complexity Low_complexity 1 28 0 392 257 201 0 chr5 105360582 105360726 -97724806 - MIR SINE MIR -3 259 87 229 286 135 23 chr5 105361458 105361591 -97723941 + MLT1K LTR MaLR 55 202 -386 278 180 141 118 chr5 105361662 105361917 -97723615 + MLT1K LTR MaLR 312 572 -16 1906 188 107 19 chr5 105365336 105365804 -97719728 + LTR22 LTR ERVK 1 509 0 521 329 92 17 chr5 105365843 105366083 -97719449 + MIR SINE MIR 5 262 0 330 269 84 72 chr5 105366617 105366784 -97718748 + MIR SINE MIR 37 205 -57 736 231 140 5 chr5 105367130 105367351 -97718181 + MIR SINE MIR 12 262 0 2204 128 0 0 chr5 105367534 105367832 -97717700 + AluSx SINE Alu 1 298 -14 30 77 0 0 chr5 105368604 105368669 -97716863 + AT_rich Low_complexity Low_complexity 1 65 0 241 315 80 66 chr5 105371198 105371514 -97714018 + L2 LINE L2 1427 1752 -1562 2291 66 0 0 chr5 105371514 105371788 -97713744 - AluY SINE Alu -1 310 37 241 315 80 66 chr5 105371788 105371909 -97713623 + L2 LINE L2 1752 1870 -1444 703 285 53 7 chr5 105372108 105372389 -97713143 + MER102a DNA MER1_type 28 321 -9 986 185 144 38 chr5 105372413 105372705 -97712827 - MER33 DNA MER1_type 0 324 2 2345 91 13 0 chr5 105373153 105373460 -97712072 - AluSq SINE Alu -2 311 1 2218 70 0 11 chr5 105373570 105373889 -97711643 + AluY SINE Alu 1 316 0 2379 90 3 0 chr5 105375583 105375882 -97709650 + AluSp SINE Alu 1 300 -13 482 282 174 14 chr5 105378839 105379052 -97706480 + MIR SINE MIR 10 256 -6 207 259 0 0 chr5 105380973 105381027 -97704505 + GA-rich Low_complexity Low_complexity 2 55 0 21 0 0 0 chr5 105381351 105381372 -97704160 + GC_rich Low_complexity Low_complexity 1 21 0 338 98 0 16 chr5 105381478 105381539 -97703993 + (TCC)n Simple_repeat Simple_repeat 1 60 0 231 88 0 0 chr5 105381569 105381603 -97703929 + (CGG)n Simple_repeat Simple_repeat 3 36 0 1069 262 54 71 chr5 105382853 105383069 -97702463 - L2 LINE L2 -12 3301 3083 858 139 67 17 chr5 105383069 105383249 -97702283 - MER53 DNA DNA 0 189 1 1069 262 54 71 chr5 105383249 105383628 -97701904 - L2 LINE L2 -230 3083 2708 219 210 177 0 chr5 105383658 105383720 -97701812 + MIR SINE MIR 162 234 -28 1171 222 132 16 chr5 105383815 105384202 -97701330 + L1MD2 LINE L1 5918 6349 -10 200 289 58 0 chr5 105385506 105385558 -97699974 - L2 LINE L2 -208 3064 3010 1058 278 53 55 chr5 105385814 105386336 -97699196 - L2 LINE L2 -283 3030 2514 943 177 6 0 chr5 105386336 105386494 -97699038 + FRAM SINE Alu 1 159 -7 192 244 22 0 chr5 105386503 105386548 -97698984 - L2 LINE L2 -783 2531 2486 365 254 61 18 chr5 105386602 105386716 -97698816 - MIR SINE MIR -56 152 34 393 337 74 12 chr5 105387699 105387862 -97697670 + MIR3 SINE MIR 33 205 -3 670 216 114 71 chr5 105388106 105388403 -97697129 + LTR16C LTR ERVL 182 491 0 619 271 156 32 chr5 105388854 105389168 -97696364 - MLT1J LTR MaLR -158 353 1 329 298 107 12 chr5 105389250 105389418 -97696114 + MLT1L LTR MaLR 348 531 -84 1583 237 58 50 chr5 105389480 105389544 -97695988 - MLT1E2 LTR MaLR 0 626 564 2104 112 0 3 chr5 105389544 105389849 -97695683 + L1MC1 LINE L1 6030 6333 0 1583 237 58 50 chr5 105389849 105390412 -97695120 - MLT1E2 LTR MaLR -62 564 1 3349 114 61 51 chr5 105391934 105392213 -97693319 + MER4B LTR ERV1 1 276 -334 2008 149 20 0 chr5 105392213 105392515 -97693017 - AluSx SINE Alu -4 308 1 3349 114 61 51 chr5 105392515 105392839 -97692693 + MER4B LTR ERV1 276 610 0 225 234 117 11 chr5 105393512 105393606 -97691926 - LTR33 LTR ERVL -2 519 416 1654 151 89 19 chr5 105393606 105393978 -97691554 + Charlie1b DNA MER1_type 1 398 -125 482 170 60 0 chr5 105394370 105394470 -97691062 - Charlie1 DNA MER1_type -25 2736 2631 299 219 65 30 chr5 105394598 105394767 -97690765 + L1ME LINE L1 5174 5348 -798 312 250 125 40 chr5 105394922 105395098 -97690434 + L1ME LINE L1 5533 5723 -447 646 323 81 61 chr5 105395262 105396212 -97689320 + L1M4 LINE L1 3683 4651 -1495 21 57 0 0 chr5 105396272 105396307 -97689225 + AT_rich Low_complexity Low_complexity 1 35 0 285 244 47 63 chr5 105396630 105396757 -97688775 - L2 LINE L2 0 3313 3189 434 302 34 7 chr5 105396759 105396908 -97688624 + MIR SINE MIR 100 252 -10 5552 146 20 15 chr5 105397525 105398710 -97686822 - L1MA6 LINE L1 -5 6295 5107 378 306 36 26 chr5 105399050 105399243 -97686289 - L2 LINE L2 -4 3309 3115 1858 263 118 54 chr5 105399250 105399495 -97686037 + L2 LINE L2 2337 2565 -748 1656 176 7 33 chr5 105399495 105399801 -97685731 - AluJo SINE Alu -9 303 6 1858 263 118 54 chr5 105399801 105400378 -97685154 + L2 LINE L2 2565 3202 -111 1457 159 0 0 chr5 105400379 105400624 -97684908 + L1MA8 LINE L1 5622 5866 -425 1637 133 36 42 chr5 105400634 105400971 -97684561 + L1MA8 LINE L1 5938 6272 -19 240 35 0 0 chr5 105400977 105401006 -97684526 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 432 234 47 0 chr5 105401006 105401113 -97684419 + L2 LINE L2 3198 3309 -4 312 288 14 50 chr5 105401398 105401537 -97683995 - L2 LINE L2 -1304 2010 1877 22 70 0 0 chr5 105401671 105401714 -97683818 + AT_rich Low_complexity Low_complexity 1 43 0 529 228 60 48 chr5 105401795 105401962 -97683570 + MIR SINE MIR 47 215 -47 475 275 35 18 chr5 105402241 105402412 -97683120 - MER5A DNA MER1_type 0 189 16 1619 184 3 12 chr5 105402566 105402893 -97682639 - L1MA9 LINE L1 -10 6302 5979 794 186 0 0 chr5 105404272 105404401 -97681131 + FLAM_A SINE Alu 5 133 0 306 98 0 66 chr5 105405514 105405575 -97679957 + MER21A LTR ERV1 14 70 -861 3294 147 51 137 chr5 105405685 105406608 -97678924 + MER21A LTR ERV1 71 914 -17 290 319 32 0 chr5 105407025 105407119 -97678413 + L2 LINE L2 3151 3247 -25 * 831 272 8 51 chr5 105407103 105407360 -97678172 + MIR SINE MIR 6 251 -11 21 71 0 0 chr5 105408246 105408288 -97677244 + AT_rich Low_complexity Low_complexity 1 42 0 200 324 69 55 chr5 105408359 105408504 -97677028 + MIR3 SINE MIR 34 180 -28 21 0 0 0 chr5 105408704 105408725 -97676807 + AT_rich Low_complexity Low_complexity 1 21 0 1928 134 22 0 chr5 105408905 105409279 -97676253 + L1PA16 LINE L1 5219 5599 -557 3203 158 7 4 chr5 105409343 105409893 -97675639 + L1PA16 LINE L1 5599 6150 -16 623 257 0 20 chr5 105410609 105410761 -97674771 + MIR3 SINE MIR 39 187 -21 21 0 0 0 chr5 105410770 105410791 -97674741 + AT_rich Low_complexity Low_complexity 1 21 0 530 227 31 0 chr5 105411312 105411440 -97674092 + MER94 DNA DNA 1 132 -2 966 182 27 16 chr5 105411580 105411767 -97673765 - MER5A DNA MER1_type 0 189 1 2258 107 23 71 chr5 105412965 105413028 -97672504 - THE1C LTR MaLR 0 375 311 2093 145 0 3 chr5 105413028 105413339 -97672193 - AluSx SINE Alu -2 310 1 2258 107 23 71 chr5 105413339 105413669 -97671863 - THE1C LTR MaLR -64 311 1 216 275 367 0 chr5 105414387 105414507 -97671025 + MIR SINE MIR 78 241 -21 213 194 28 14 chr5 105415161 105415233 -97670299 + CT-rich Low_complexity Low_complexity 1 73 0 489 306 57 18 chr5 105415340 105415569 -97669963 - MIR SINE MIR -11 251 14 238 355 13 0 chr5 105415620 105415696 -97669836 - L3 LINE CR1 -3 1574 1498 358 343 99 6 chr5 105416437 105416609 -97668923 + MIR SINE MIR 1 188 -74 2365 99 0 0 chr5 105416879 105417183 -97668349 + AluSg SINE Alu 1 304 -6 284 313 23 0 chr5 105417544 105417672 -97667860 + L1ME LINE L1 5614 5744 -377 2603 225 114 88 chr5 105417849 105418697 -97666835 + HAL1 LINE L1 23 847 -1660 2112 118 7 0 chr5 105418697 105418986 -97666546 + AluSx SINE Alu 1 291 -21 2603 225 114 88 chr5 105418986 105419523 -97666009 + HAL1 LINE L1 847 1448 -1059 707 212 69 37 chr5 105419523 105419740 -97665792 + MER58A DNA MER1_type 1 224 0 2603 225 114 88 chr5 105419740 105419771 -97665761 + HAL1 LINE L1 1448 1477 -1030 1506 256 110 45 chr5 105419772 105420041 -97665491 + HAL1 LINE L1 1625 1875 -632 1301 143 155 23 chr5 105420041 105420306 -97665226 + AluJo SINE Alu 1 300 -2 1506 256 110 45 chr5 105420306 105420856 -97664676 + HAL1 LINE L1 1875 2497 -10 35 0 0 0 chr5 105420859 105420894 -97664638 + AT_rich Low_complexity Low_complexity 1 35 0 260 363 0 0 chr5 105420915 105421006 -97664526 - MIR3 SINE MIR -16 192 102 242 214 0 18 chr5 105421144 105421200 -97664332 + MLT1K LTR MaLR 2 56 -532 717 243 110 0 chr5 105421430 105421603 -97663929 - MIR SINE MIR -62 200 9 676 268 65 77 chr5 105421637 105422055 -97663477 + MLT1K LTR MaLR 31 443 -145 405 275 8 42 chr5 105422084 105422204 -97663328 + L2 LINE L2 3189 3304 -9 407 221 0 0 chr5 105422232 105422318 -97663214 + MLT1K LTR MaLR 483 568 -20 3203 169 10 5 chr5 105422592 105423194 -97662338 - L1PB4 LINE L1 -3 6153 5549 1070 199 86 33 chr5 105423195 105423385 -97662147 + L1P LINE L1 4854 5067 -1079 1555 89 36 18 chr5 105423385 105423610 -97661922 + MER30 DNA MER1_type 2 230 0 1070 199 86 33 chr5 105423610 105423720 -97661812 + L1P LINE L1 5067 5170 -976 2290 123 0 0 chr5 105423780 105424088 -97661444 - AluSg SINE Alu 0 310 3 1424 167 16 82 chr5 105424274 105424660 -97660872 - MER67C LTR ERV1 -241 273 1 1989 150 10 65 chr5 105424981 105425367 -97660165 + MLT1A1 LTR MaLR 1 365 0 1602 145 40 47 chr5 105425514 105425811 -97659721 + AluJb SINE Alu 11 305 -7 21 57 0 0 chr5 105426153 105426188 -97659344 + AT_rich Low_complexity Low_complexity 1 35 0 198 336 41 8 chr5 105426348 105426470 -97659062 + L2 LINE L2 720 845 -2469 1991 126 58 30 chr5 105426868 105427233 -97658299 + THE1C LTR MaLR 1 375 0 318 253 0 0 chr5 105427294 105427393 -97658139 + GA-rich Low_complexity Low_complexity 2 100 0 2131 182 88 4 chr5 105427754 105428211 -97657321 + MLT1D LTR MaLR 6 500 -5 568 247 156 13 chr5 105428243 105428512 -97657020 + MLT1H LTR MaLR 1 275 -274 390 224 112 0 chr5 105428578 105428694 -97656838 + MLT1H LTR MaLR 421 549 0 1375 197 56 83 chr5 105429819 105430302 -97655230 + MLT1D LTR MaLR 36 505 0 559 289 103 20 chr5 105430302 105430506 -97655026 + MIR SINE MIR 42 262 0 2295 99 0 0 chr5 105431172 105431488 -97654044 - AluSc SINE Alu 0 316 1 236 289 156 0 chr5 105432446 105432536 -97652996 + MIR SINE MIR 4 107 -155 409 285 51 15 chr5 105432817 105432954 -97652578 + MIR SINE MIR 46 187 -75 626 279 92 17 chr5 105432987 105433335 -97652197 + L1MC4a LINE L1 5533 5906 -1902 2309 108 3 0 chr5 105433335 105433632 -97651900 + AluSx SINE Alu 1 298 -14 28927 42 1 1 chr5 105433998 105437768 -97647764 + L1P LINE L1 1436 5206 -940 1981 94 22 11 chr5 105437960 105438272 -97647260 + AluSc SINE Alu 2 316 0 2231 105 0 0 chr5 105438397 105438703 -97646829 + AluSc SINE Alu 1 306 -3 339 302 79 12 chr5 105439513 105439673 -97645859 - MIR SINE MIR -62 146 3 7828 72 3 2 chr5 105440786 105441905 -97643627 - L1P LINE L1 -2450 3696 2577 * 11302 40 9 8 chr5 105441903 105442302 -97643230 + L1P2 LINE L1 3922 4319 -1835 2529 36 0 13 chr5 105442302 105442608 -97642924 - AluY SINE Alu -9 302 1 11302 40 9 8 chr5 105442608 105443832 -97641700 + L1P2 LINE L1 4319 5545 -609 5105 33 0 0 chr5 105444769 105445368 -97640164 - L1PA4 LINE L1 -11 6144 5546 342 196 14 105 chr5 105445983 105446087 -97639445 - MER113 DNA MER1_type? -391 130 41 1763 186 105 19 chr5 105446087 105446517 -97639015 - MLT1C LTR MaLR 0 467 1 342 196 14 105 chr5 105446517 105446555 -97638977 - MER113 DNA MER1_type? -480 41 1 262 314 20 39 chr5 105446579 105446681 -97638851 + MIR SINE MIR 46 145 -117 829 239 92 26 chr5 105446794 105447100 -97638432 + MLT1J2 LTR MaLR 1 326 -124 573 306 64 14 chr5 105447464 105447761 -97637771 - MLT1K LTR MaLR -123 465 154 891 288 115 20 chr5 105449055 105449454 -97636078 - L2 LINE L2 -4 3309 2873 326 281 200 0 chr5 105450226 105450361 -97635171 + MIR SINE MIR 89 250 -12 2048 122 46 68 chr5 105451366 105451734 -97633798 + THE1B LTR MaLR 1 360 -4 207 308 42 28 chr5 105451810 105451953 -97633579 + L2 LINE L2 2828 2972 -300 630 268 32 0 chr5 105451954 105452111 -97633421 - MER45A DNA AcHobo 0 178 17 686 219 20 98 chr5 105452172 105452418 -97633114 + L2 LINE L2 3087 3313 0 235 277 40 81 chr5 105452812 105452960 -97632572 - MER21B LTR ERV1 -155 708 567 * 1089 199 87 21 chr5 105452948 105453234 -97632298 - LTR52 LTR ERVL -116 305 1 796 237 47 43 chr5 105453265 105453805 -97631727 - L1MC5 LINE L1 -83 7878 7307 322 203 36 7 chr5 105453808 105453946 -97631586 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 954 223 39 48 chr5 105453959 105454296 -97631236 - L1MC5 LINE L1 -654 7307 6974 198 0 0 0 chr5 105455244 105455266 -97630266 + (T)n Simple_repeat Simple_repeat 1 22 0 563 226 48 60 chr5 105455624 105455792 -97629740 + MER5B DNA MER1_type 6 171 -7 631 279 91 42 chr5 105455992 105456279 -97629253 + MLT1K LTR MaLR 128 428 -160 7001 48 0 3 chr5 105457765 105458885 -97626647 - L1PA5 LINE L1 0 6154 5024 186 43 0 0 chr5 105461512 105461535 -97623997 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 548 196 14 36 chr5 105461726 105462078 -97623454 + CT-rich Low_complexity Low_complexity 1 344 0 410 0 0 20 chr5 105462160 105462211 -97623321 + (GA)n Simple_repeat Simple_repeat 1 50 0 809 191 19 0 chr5 105462278 105462435 -97623097 + MER5A DNA MER1_type 29 188 -1 14226 182 46 6 chr5 105462666 105465616 -97619916 - L1PB1 LINE L1 -1 7110 4279 207 0 0 0 chr5 105465616 105465639 -97619893 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 14226 182 46 6 chr5 105465639 105469121 -97616411 - L1PB1 LINE L1 -2832 4279 252 417 316 9 0 chr5 105469130 105469244 -97616288 - MIR SINE MIR -55 153 39 355 256 137 75 chr5 105469390 105469657 -97615875 - L1ME4a LINE L1 -2 6119 5819 1219 206 11 21 chr5 105469657 105469938 -97615594 - L1PB4 LINE L1 -6 6150 5873 355 256 137 75 chr5 105469938 105470056 -97615476 - L1ME4a LINE L1 -302 5819 5710 320 167 167 0 chr5 105472387 105472453 -97613079 + MER81 DNA DNA 32 108 -6 2074 155 34 47 chr5 105473604 105474174 -97611358 + MLT2A2 LTR ERVL 3 546 -8 307 301 31 68 chr5 105474266 105474429 -97611103 + L1MC4 LINE L1 6548 6704 -1338 22 0 0 0 chr5 105474495 105474517 -97611015 + AT_rich Low_complexity Low_complexity 1 22 0 256 301 21 38 chr5 105474745 105474931 -97610601 - MLT1K LTR MaLR -2 586 404 1290 180 25 8 chr5 105475008 105475253 -97610279 - L1PB1 LINE L1 -6777 253 5 464 265 13 7 chr5 105477192 105477343 -97608189 - L1ME3 LINE L1 -13 6149 5998 2123 128 7 10 chr5 105477387 105477401 -97608131 - AluSq SINE Alu -17 296 283 270 0 0 0 chr5 105477401 105477431 -97608101 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 2123 128 7 10 chr5 105477431 105477713 -97607819 - AluSq SINE Alu -30 283 1 503 313 97 15 chr5 105478744 105479083 -97606449 - L1ME3 LINE L1 -193 5928 5562 1040 95 85 11 chr5 105479156 105479458 -97606074 - THE1C LTR MaLR 0 375 1 247 228 62 95 chr5 105479470 105479795 -97605737 + L1ME4a LINE L1 5651 5964 -157 409 244 144 50 chr5 105480813 105480993 -97604539 + L2 LINE L2 3117 3313 0 343 181 134 47 chr5 105481177 105481304 -97604228 + MIR SINE MIR 115 252 -10 2438 248 64 139 chr5 105482381 105482514 -97603018 - L2 LINE L2 -15 3298 3157 3515 85 12 0 chr5 105482514 105482994 -97602538 + LTR19A LTR ERV1 1 486 0 2438 248 64 139 chr5 105482994 105484533 -97600999 - L2 LINE L2 -156 3157 1848 1059 198 96 66 chr5 105484533 105484739 -97600793 - MLT1A2 LTR MaLR 0 374 151 1844 149 20 30 chr5 105484739 105485040 -97600492 - AluJb SINE Alu -14 298 1 1059 198 96 66 chr5 105485040 105485196 -97600336 - MLT1A2 LTR MaLR -223 151 1 2438 248 64 139 chr5 105485196 105485918 -97599614 - L2 LINE L2 -1465 1848 1074 514 291 69 49 chr5 105486395 105486642 -97598890 - MIR SINE MIR -6 256 5 296 279 162 30 chr5 105486852 105487046 -97598486 + MIR SINE MIR 31 249 -13 1736 143 40 30 chr5 105487301 105487630 -97597902 - Tigger3(Golem) DNA MER2_type 0 3029 2698 735 105 92 7 chr5 105487730 105487882 -97597650 - Tigger3(Golem) DNA MER2_type -560 2469 2305 6761 146 41 55 chr5 105487948 105488236 -97597296 + L1MA5 LINE L1 3745 4036 -2264 842 109 58 0 chr5 105488236 105488374 -97597158 + Tigger3(Golem) DNA MER2_type 2225 2370 -659 6761 146 41 55 chr5 105488374 105489616 -97595916 + L1MA5 LINE L1 4036 5346 -954 2210 133 0 0 chr5 105489616 105489918 -97595614 + AluSx SINE Alu 2 303 -9 6761 146 41 55 chr5 105489918 105490854 -97594678 + L1MA5 LINE L1 5346 6294 -6 1694 156 3 0 chr5 105490854 105491137 -97594395 - Tigger3(Golem) DNA MER2_type -2717 312 29 339 278 62 10 chr5 105491242 105491339 -97594193 - MER91B DNA MER1_type -62 128 27 1101 250 65 34 chr5 105491575 105491621 -97593911 - MSTD LTR MaLR 0 396 353 2100 141 0 0 chr5 105491621 105491912 -97593620 + AluSx SINE Alu 1 291 -21 1101 250 65 34 chr5 105491912 105492198 -97593334 - MSTD LTR MaLR -43 353 48 2372 100 0 0 chr5 105492198 105492498 -97593034 + AluY SINE Alu 1 300 -11 1101 250 65 34 chr5 105492498 105492548 -97592984 - MSTD LTR MaLR -348 48 1 663 307 24 28 chr5 105492801 105493052 -97592480 - MIR SINE MIR 0 262 13 6931 45 11 1 chr5 105494164 105495032 -97590500 + L1PA7 LINE L1 5276 6152 -2 492 232 191 6 chr5 105495948 105496116 -97589416 + MIR SINE MIR 63 261 -1 253 254 17 0 chr5 105496122 105496181 -97589351 + MIR SINE MIR 82 141 -67 27 0 0 0 chr5 105496762 105496789 -97588743 + AT_rich Low_complexity Low_complexity 1 27 0 2433 65 0 13 chr5 105497680 105497988 -97587544 + AluY SINE Alu 1 304 -7 452 261 42 34 chr5 105499345 105499464 -97586068 + MIR3 SINE MIR 40 159 -49 23 0 0 0 chr5 105499900 105499923 -97585609 + AT_rich Low_complexity Low_complexity 1 23 0 2076 124 0 0 chr5 105500660 105500982 -97584550 + AluSx SINE Alu 1 322 0 388 301 181 5 chr5 105501238 105501437 -97584095 - L2 LINE L2 -226 3087 2854 233 271 82 12 chr5 105502512 105502597 -97582935 + MIR SINE MIR 111 201 -61 2239 186 14 14 chr5 105502672 105502930 -97582602 - MLT1C LTR MaLR -32 435 175 540 45 0 0 chr5 105502930 105502997 -97582535 + (CATA)n Simple_repeat Simple_repeat 4 70 0 2239 186 14 14 chr5 105502997 105503173 -97582359 - MLT1C LTR MaLR -291 176 1 23 0 0 0 chr5 105503173 105503196 -97582336 + AT_rich Low_complexity Low_complexity 1 23 0 307 246 0 15 chr5 105503366 105503431 -97582101 - MIR SINE MIR -125 83 20 29 28 0 0 chr5 105505018 105505054 -97580478 + AT_rich Low_complexity Low_complexity 1 36 0 435 245 28 49 chr5 105505642 105505785 -97579747 - MER5A DNA MER1_type 0 189 50 855 292 138 30 chr5 105506023 105506430 -97579102 - MLT1L LTR MaLR -13 602 152 598 270 153 29 chr5 105507216 105507625 -97577907 - L2 LINE L2 -6 3307 2645 461 281 85 53 chr5 105507876 105508218 -97577314 - L1MEd LINE L1 -5082 1037 685 705 222 14 0 chr5 105508703 105508847 -97576685 - LTR16A LTR ERVL -5 445 300 1059 246 79 14 chr5 105508906 105509186 -97576346 - LTR16A LTR ERVL -137 313 16 276 30 0 0 chr5 105509798 105509831 -97575701 + (CA)n Simple_repeat Simple_repeat 2 34 0 318 167 0 0 chr5 105509924 105509984 -97575548 + (CA)n Simple_repeat Simple_repeat 2 61 0 746 214 68 15 chr5 105510381 105510638 -97574894 - MLT1F1 LTR MaLR -2 565 177 641 316 53 18 chr5 105511110 105511338 -97574194 + MIR SINE MIR 23 258 -4 1419 164 18 51 chr5 105511430 105511676 -97573856 + MER33 DNA MER1_type 1 228 -2357 2030 127 0 0 chr5 105511676 105511984 -97573548 - AluSx SINE Alu 0 308 1 1419 164 18 51 chr5 105511984 105512074 -97573458 + MER33 DNA MER1_type 228 319 -5 273 309 0 25 chr5 105512446 105512527 -97573005 + MLT1L LTR MaLR 1 79 -536 228 217 0 22 chr5 105512558 105512604 -97572928 + MLT1I LTR MaLR 97 141 -268 228 189 0 19 chr5 105513142 105513195 -97572337 + (TA)n Simple_repeat Simple_repeat 2 53 0 280 266 16 0 chr5 105513196 105513260 -97572272 + L2 LINE L2 3163 3227 -45 3345 130 36 5 chr5 105513759 105514313 -97571219 - Ricksha DNA DNA 0 2854 2284 856 240 68 47 chr5 105514549 105514887 -97570645 - L1ME3A LINE L1 -5 6165 5821 440 319 25 4 chr5 105514884 105515125 -97570407 - L1M4 LINE L1 -3179 2967 2722 * 1050 127 57 0 chr5 105515136 105515293 -97570239 - AluSg/x SINE Alu -16 296 131 180 0 0 0 chr5 105516188 105516208 -97569324 + (A)n Simple_repeat Simple_repeat 1 20 0 250 87 43 0 chr5 105516907 105516953 -97568579 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 105517083 105517105 -97568427 + AT_rich Low_complexity Low_complexity 1 22 0 692 270 97 8 chr5 105517115 105517352 -97568180 + HAL1 LINE L1 25 282 -2225 24 0 0 0 chr5 105517463 105517487 -97568045 + AT_rich Low_complexity Low_complexity 1 24 0 1319 269 75 30 chr5 105517739 105518394 -97567138 + HAL1b LINE L1 114 797 -551 515 243 176 16 chr5 105518556 105518732 -97566800 + HAL1b LINE L1 986 1133 -215 359 98 16 0 chr5 105518732 105518793 -97566739 + (TA)n Simple_repeat Simple_repeat 1 62 0 515 243 176 16 chr5 105518793 105518929 -97566603 + HAL1b LINE L1 1133 1348 0 237 267 53 0 chr5 105519136 105519211 -97566321 - MIR SINE MIR -33 229 151 370 318 85 0 chr5 105519211 105519340 -97566192 + MER91C DNA MER1_type 1 140 0 207 337 0 35 chr5 105519340 105519404 -97566128 - MIR SINE MIR -109 153 93 2548 37 0 3 chr5 105519406 105519705 -97565827 + AluY SINE Alu 1 298 -13 204 244 0 0 chr5 105522246 105522287 -97563245 - L2 LINE L2 -4 3268 3228 301 288 139 13 chr5 105522957 105523278 -97562254 - L1 LINE L1 -1870 4276 3914 2180 249 66 67 chr5 105523531 105524683 -97560849 - L1MC4a LINE L1 -743 5403 4987 27 87 0 0 chr5 105524838 105524907 -97560625 + AT_rich Low_complexity Low_complexity 1 69 0 10949 138 47 59 chr5 105525065 105527148 -97558384 - Ricksha DNA DNA 0 3246 1189 716 116 83 8 chr5 105527150 105527271 -97558261 - Ricksha DNA DNA -2745 501 372 271 196 0 0 chr5 105527269 105527325 -97558207 - Ricksha DNA DNA -1965 81 26 * 328 238 12 0 chr5 105527384 105527464 -97558068 + MER103 DNA DNA 86 166 0 1198 274 81 31 chr5 105528503 105528982 -97556550 + L2 LINE L2 2811 3313 0 265 222 77 51 chr5 105529692 105529809 -97555723 + L1ME3 LINE L1 6041 6160 -2 243 216 14 54 chr5 105580560 105580634 -97504898 + MER112 DNA MER1_type 8 78 -182 739 283 113 30 chr5 105581389 105581654 -97503878 - LTR16A LTR ERVL -59 391 105 2539 58 0 3 chr5 105581784 105582096 -97503436 + AluY SINE Alu 1 311 0 32 0 0 0 chr5 105582096 105582128 -97503404 + AT_rich Low_complexity Low_complexity 1 32 0 434 191 20 61 chr5 105582143 105582290 -97503242 - L1MC4 LINE L1 -1042 7000 6860 426 277 146 32 chr5 105582284 105582537 -97502995 - L1MC4a LINE L1 -1099 6709 6428 * 2344 220 66 49 chr5 105582820 105583393 -97502139 + L1MB8 LINE L1 6 588 -6271 * 4502 221 49 66 chr5 105583373 105583915 -97501617 + L1MB8 LINE L1 3900 4449 -2508 2366 73 7 3 chr5 105583915 105584217 -97501315 + AluSq SINE Alu 1 303 -10 4502 221 49 66 chr5 105584217 105584357 -97501175 + L1MB8 LINE L1 4449 4590 -2367 711 237 52 17 chr5 105584357 105584530 -97501002 - MER8 DNA MER2_type -60 179 1 4502 221 49 66 chr5 105584530 105585838 -97499694 + L1MB8 LINE L1 4590 5895 -1062 4273 157 60 23 chr5 105585835 105585859 -97499673 + L1MB8 LINE L1 6123 6145 -844 * 2259 102 0 16 chr5 105585859 105586164 -97499368 - AluY SINE Alu -11 300 1 4273 157 60 23 chr5 105586164 105586969 -97498563 + L1MB8 LINE L1 6145 6983 -6 2069 132 14 0 chr5 105586988 105587284 -97498248 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr5 105587284 105587305 -97498227 + AT_rich Low_complexity Low_complexity 1 21 0 2321 109 0 0 chr5 105589029 105589333 -97496199 - AluSx SINE Alu -8 304 1 1261 266 92 59 chr5 105589439 105590100 -97495432 + L2 LINE L2 1666 2348 -966 189 218 36 0 chr5 105590244 105590299 -97495233 + L2 LINE L2 2231 2287 -1027 908 121 38 0 chr5 105590302 105590434 -97495098 - AluJo SINE Alu -171 141 5 236 233 33 0 chr5 105590438 105590498 -97495034 + L2 LINE L2 2287 2348 -966 718 261 141 14 chr5 105590513 105590789 -97494743 + L2 LINE L2 2988 3298 -15 228 281 45 22 chr5 105592126 105592215 -97493317 + MIR SINE MIR 119 209 -53 261 311 67 0 chr5 105592285 105592370 -97493162 - MIR SINE MIR -93 115 22 254 265 83 48 chr5 105592652 105592818 -97492714 + MIR SINE MIR 51 224 -38 310 296 14 92 chr5 105593532 105593674 -97491858 + MIR SINE MIR 8 138 -124 2662 178 70 9 chr5 105593693 105594221 -97491311 + MER68 LTR ERV1 2 561 -1 183 129 0 0 chr5 105594314 105594345 -97491187 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1311 219 117 28 chr5 105594390 105594819 -97490713 + MLT1C LTR MaLR 1 467 0 839 313 116 20 chr5 105594987 105595428 -97490104 + L2 LINE L2 2494 2976 -338 234 292 56 29 chr5 105595485 105595590 -97489942 + MIR SINE MIR 20 130 -78 * 279 197 74 177 chr5 105595588 105595791 -97489741 + MIR SINE MIR 81 262 0 2258 98 0 3 chr5 105595839 105596136 -97489396 - AluSg SINE Alu -14 296 1 361 250 29 19 chr5 105596369 105596473 -97489059 + L2 LINE L2 3204 3308 -5 21 36 0 0 chr5 105596606 105596634 -97488898 + AT_rich Low_complexity Low_complexity 1 28 0 301 311 107 8 chr5 105597304 105597426 -97488106 + MIR3 SINE MIR 69 202 -6 2453 54 0 0 chr5 105597552 105597848 -97487684 + AluY SINE Alu 1 296 -15 937 191 32 16 chr5 105597963 105598152 -97487380 + MER20 DNA MER1_type 28 219 0 23 0 0 0 chr5 105598397 105598420 -97487112 + AT_rich Low_complexity Low_complexity 1 23 0 404 267 20 62 chr5 105598496 105598642 -97486890 - L2 LINE L2 -4 3309 3170 7925 132 26 28 chr5 105598783 105601245 -97484287 - L1MA3 LINE L1 0 6305 3851 2289 101 3 3 chr5 105601256 105601552 -97483980 - AluSc SINE Alu -13 296 1 1036 92 0 0 chr5 105601660 105601791 -97483741 + AluSq/x SINE Alu 3 133 -180 1632 188 0 27 chr5 105603215 105603508 -97482024 - AluJo SINE Alu -22 290 6 1636 128 44 53 chr5 105604308 105604629 -97480903 - THE1B LTR MaLR 0 364 47 264 96 0 0 chr5 105604629 105604678 -97480854 - MER5A DNA MER1_type -137 52 4 666 195 13 40 chr5 105604953 105605102 -97480430 - Charlie1 DNA MER1_type -2616 145 1 22 103 0 0 chr5 105606930 105607008 -97478524 + AT_rich Low_complexity Low_complexity 1 78 0 4262 169 73 25 chr5 105608519 105609531 -97476001 - Tigger6a DNA MER2_type -1 1082 22 5609 87 37 26 chr5 105609608 105609797 -97475735 + L1PB1 LINE L1 5147 5332 -819 2162 104 4 0 chr5 105609797 105610076 -97475456 + AluSq SINE Alu 14 293 -20 5609 87 37 26 chr5 105610076 105610873 -97474659 + L1PB1 LINE L1 5332 6149 -2 2282 87 3 0 chr5 105612693 105612979 -97472553 + AluSx SINE Alu 14 300 -12 2177 81 50 0 chr5 105613294 105613577 -97471955 - AluSg SINE Alu -13 297 1 256 236 56 56 chr5 105613642 105613714 -97471818 - L2 LINE L2 -10 3262 3191 2379 82 0 0 chr5 105613748 105614040 -97471492 + AluSc SINE Alu 12 303 -6 666 293 128 0 chr5 105614062 105614328 -97471204 + L2 LINE L2 2921 3220 -93 5323 65 21 11 chr5 105614329 105615035 -97470497 - L1PA10 LINE L1 -2 6166 5454 326 361 4 39 chr5 105615180 105615440 -97470092 - L2 LINE L2 -204 3068 2818 268 143 0 18 chr5 105617395 105617451 -97468081 - HsTC2 DNA Tc2 -1839 59 5 2066 125 0 3 chr5 105617605 105617902 -97467630 - AluSc SINE Alu -13 296 1 259 225 45 27 chr5 105619379 105619490 -97466042 + L1ME LINE L1 5265 5377 -769 2430 85 3 0 chr5 105619616 105619921 -97465611 + AluY SINE Alu 2 307 -4 422 296 126 9 chr5 105619928 105620151 -97465381 + L1ME LINE L1 5523 5771 -350 4706 98 33 16 chr5 105620164 105620898 -97464634 + L1PA16 LINE L1 5418 6163 -3 249 241 126 11 chr5 105621019 105621106 -97464426 + MER94 DNA DNA 5 101 -33 602 241 22 69 chr5 105622522 105622667 -97462865 + MIR SINE MIR 5 178 -84 2400 89 0 0 chr5 105622667 105622960 -97462572 + AluSx SINE Alu 1 293 -19 602 241 22 69 chr5 105622960 105623038 -97462494 + MIR SINE MIR 178 258 -4 1370 255 95 15 chr5 105623573 105624206 -97461326 + L2 LINE L2 2585 3271 -42 613 278 51 43 chr5 105625545 105625779 -97459753 - MIR SINE MIR -1 261 26 543 272 110 6 chr5 105626475 105626648 -97458884 - MIR SINE MIR -53 209 19 1333 182 191 28 chr5 105626964 105627387 -97458145 + LTR54B LTR ERV1 1 492 -6 2199 115 3 0 chr5 105628683 105628979 -97456553 + AluSc SINE Alu 1 297 -12 278 186 73 121 chr5 105629505 105629629 -97455903 - L1MC4a LINE L1 -1836 5972 5855 * 325 277 80 26 chr5 105629616 105630061 -97455471 - L1MC4a LINE L1 -473 5648 5127 290 65 0 0 chr5 105630059 105630105 -97455427 + L1MA7 LINE L1 6243 6288 -3 * 489 283 99 86 chr5 105630114 105630186 -97455346 - L1MC4a LINE L1 -1005 5141 5071 2003 82 94 0 chr5 105630186 105630453 -97455079 - AluY SINE Alu -19 292 1 489 283 99 86 chr5 105630453 105630758 -97454774 - L1MC4a LINE L1 -1075 5071 4771 1795 199 0 0 chr5 105630758 105631069 -97454463 - AluJb SINE Alu -1 311 1 489 283 99 86 chr5 105631069 105631379 -97454153 - L1MC4a LINE L1 -1375 4771 4444 200 273 21 119 chr5 105631408 105631551 -97453981 + MER5B DNA MER1_type 42 170 -8 207 211 0 0 chr5 105631916 105631954 -97453578 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1285 256 100 43 chr5 105632410 105633106 -97452426 + L2 LINE L2 2550 3309 -4 2295 110 0 0 chr5 105633198 105633497 -97452035 - AluSx SINE Alu -13 299 1 1858 101 3 110 chr5 105633638 105633987 -97451545 + AluSp SINE Alu 1 315 0 4859 127 30 4 chr5 105633987 105634817 -97450715 - L1MA5 LINE L1 -22 6278 5427 1039 155 57 21 chr5 105634818 105635012 -97450520 - MER58A DNA MER1_type -14 210 10 464 170 252 54 chr5 105635027 105635129 -97450403 - MER5B DNA MER1_type -1 177 96 2179 80 18 0 chr5 105635129 105635405 -97450127 + AluSx SINE Alu 21 301 -11 464 170 252 54 chr5 105635405 105635449 -97450083 - MER5B DNA MER1_type -82 96 2 1886 117 30 4 chr5 105635660 105635925 -97449607 + AluSq SINE Alu 1 272 -41 1205 160 0 29 chr5 105636011 105636250 -97449282 - AluJb SINE Alu 0 317 85 450 303 69 49 chr5 105636250 105636600 -97448932 + L1ME4a LINE L1 4407 4763 -1383 1654 190 7 3 chr5 105636841 105637130 -97448402 - AluJo SINE Alu -22 290 1 1261 254 77 37 chr5 105637460 105638030 -97447502 + L1MCc LINE L1 -498 94 -5814 2173 232 56 43 chr5 105638174 105639051 -97446481 + L1MCc LINE L1 274 1164 -4891 768 251 65 43 chr5 105639107 105639341 -97446191 + L1MCc LINE L1 1174 1401 -5206 1680 144 0 0 chr5 105639341 105639577 -97445955 + AluSx SINE Alu 1 236 -76 768 251 65 43 chr5 105639577 105639635 -97445897 + L1MCc LINE L1 1401 1456 -5151 1480 121 178 11 chr5 105639635 105639899 -97445633 + AluSg1 SINE Alu 1 308 -1 768 251 65 43 chr5 105639899 105640187 -97445345 + L1MCc LINE L1 1456 1984 -4623 2744 168 51 36 chr5 105640187 105640831 -97444701 + L1MB7 LINE L1 5512 6165 -19 571 283 109 17 chr5 105640857 105641280 -97444252 + L1ME4a LINE L1 5446 5917 -204 511 297 78 16 chr5 105641493 105641749 -97443783 + L1MC4 LINE L1 7392 7663 -379 1355 231 84 25 chr5 105641750 105642239 -97443293 + HAL1 LINE L1 1353 1870 -637 1257 270 119 34 chr5 105642328 105643073 -97442459 + HAL1 LINE L1 1695 2503 -4 2081 155 3 0 chr5 105643080 105643390 -97442142 + AluJo SINE Alu 1 311 -1 194 175 25 25 chr5 105643566 105643606 -97441926 - L2 LINE L2 -219 3053 3014 360 295 137 72 chr5 105645447 105645878 -97439654 - L1M2 LINE L1 -5831 1018 560 204 40 0 0 chr5 105645896 105645921 -97439611 + (CCG)n Simple_repeat Simple_repeat 2 26 0 310 300 119 70 chr5 105645932 105646302 -97439230 + L1M2 LINE L1 579 966 -5883 * 333 274 100 97 chr5 105646145 105646444 -97439088 - L1M2 LINE L1 -5458 1391 1092 419 205 13 0 chr5 105647848 105647926 -97437606 + L2 LINE L2 3226 3304 -9 513 305 103 90 chr5 105648168 105648545 -97436987 - L2 LINE L2 0 3272 2891 1314 217 65 39 chr5 105648932 105649019 -97436513 - MLT1L LTR MaLR -71 544 461 3120 136 9 38 chr5 105649019 105649549 -97435983 + MLT2B2 LTR ERVL 1 515 0 1314 217 65 39 chr5 105649549 105649848 -97435684 - MLT1L LTR MaLR -154 461 148 397 353 36 12 chr5 105651085 105651252 -97434280 + MIR SINE MIR 2 172 -90 582 286 78 42 chr5 105651584 105652081 -97433451 + MLT1L LTR MaLR 97 611 -4 863 215 0 0 chr5 105652359 105652517 -97433015 - FRAM SINE Alu -8 158 1 2454 129 25 39 chr5 105652799 105653233 -97432299 - MSTA LTR MaLR 0 428 1 9652 153 32 3 chr5 105653233 105654838 -97430694 - MSTA-int LTR MaLR 0 1651 1 2511 120 50 26 chr5 105654838 105654879 -97430653 - MSTA LTR MaLR 0 428 389 2326 94 7 0 chr5 105654879 105655177 -97430355 + AluSp SINE Alu 1 300 -13 2511 120 50 26 chr5 105655177 105655553 -97429979 - MSTA LTR MaLR -39 389 1 351 205 169 26 chr5 105655764 105655984 -97429548 + MLT1F1 LTR MaLR 283 563 -4 192 211 132 0 chr5 105656034 105656072 -97429460 + MIR SINE MIR 21 63 -145 2210 156 63 0 chr5 105656300 105656678 -97428854 + MER93a LTR ERV1 1 402 0 467 306 12 18 chr5 105656684 105656854 -97428678 - MIR SINE MIR -2 260 92 378 240 45 65 chr5 105657126 105657280 -97428252 + MLT1J2 LTR MaLR 18 168 -282 2359 142 105 6 chr5 105657388 105657854 -97427678 + MER50 LTR ERV1 1 512 -222 6732 43 0 0 chr5 105657864 105658709 -97426823 - L1PA5 LINE L1 0 6154 5310 1159 169 5 5 chr5 105658709 105658922 -97426610 + MER50 LTR ERV1 499 711 -23 308 241 83 35 chr5 105658931 105659076 -97426456 + MLT1J LTR MaLR 330 481 -30 1613 188 35 7 chr5 105659087 105659375 -97426157 - AluJb SINE Alu -16 296 1 231 114 0 0 chr5 105659620 105659655 -97425877 + (T)n Simple_repeat Simple_repeat 1 35 0 280 188 62 12 chr5 105659726 105659806 -97425726 + MLT1L LTR MaLR 1 84 -531 2288 243 47 0 chr5 105659811 105660372 -97425160 - MLT1G LTR MaLR -3 587 1 760 147 9 0 chr5 105661251 105661367 -97424165 - FLAM_C SINE Alu -15 118 2 900 229 0 0 chr5 105661378 105661535 -97423997 - AluJo SINE Alu -155 157 1 990 279 44 9 chr5 105661591 105661906 -97423626 - MLT1K LTR MaLR -2 586 261 23 33 0 0 chr5 105662167 105662197 -97423335 + AT_rich Low_complexity Low_complexity 1 30 0 2326 104 3 0 chr5 105662329 105662637 -97422895 + AluSx SINE Alu 1 309 -3 507 258 94 83 chr5 105663064 105663583 -97421949 - L1MC4 LINE L1 -25 8017 7493 246 125 0 0 chr5 105663610 105663650 -97421882 + MER103 DNA DNA 48 87 -79 1634 202 67 29 chr5 105665029 105665880 -97419652 - MER69B DNA AcHobo -45 1181 105 852 215 17 9 chr5 105666141 105666482 -97419050 + L1MC4 LINE L1 7477 7888 -154 21 0 0 0 chr5 105666535 105666556 -97418976 + AT_rich Low_complexity Low_complexity 1 21 0 468 200 9 55 chr5 105666578 105666688 -97418844 - MER69B DNA AcHobo -1105 121 17 392 299 51 0 chr5 105667466 105667583 -97417949 - L2 LINE L2 -705 2609 2487 952 236 128 35 chr5 105667586 105667992 -97417540 - MER68 LTR ERV1 -2 560 117 1424 161 44 3 chr5 105668014 105668424 -97417108 + LTR32 LTR ERVL 14 471 0 579 158 0 0 chr5 105668443 105668538 -97416994 - MER68 LTR ERV1 -467 95 1 422 315 22 34 chr5 105668550 105668728 -97416804 - L2 LINE L2 -824 2490 2315 422 242 38 66 chr5 105668752 105669061 -97416471 - MLT1J2 LTR MaLR -29 421 105 305 157 0 0 chr5 105669151 105669202 -97416330 - L2 LINE L2 -1063 2251 2201 526 218 21 85 chr5 105670533 105670721 -97414811 - MER5B DNA MER1_type -2 176 1 2381 64 3 3 chr5 105671185 105671481 -97414051 - AluSp SINE Alu -17 296 1 537 235 179 17 chr5 105672387 105672566 -97412966 - MIR SINE MIR -19 243 36 186 296 68 11 chr5 105672854 105672942 -97412590 + MIR SINE MIR 144 236 -26 189 0 0 0 chr5 105673948 105673969 -97411563 + (T)n Simple_repeat Simple_repeat 1 21 0 1017 236 167 13 chr5 105674296 105674943 -97410589 - L1ME3A LINE L1 -219 5951 5188 2467 73 0 0 chr5 105675870 105676171 -97409361 + AluY SINE Alu 1 301 -10 1618 164 18 21 chr5 105676454 105676740 -97408792 - AluJo SINE Alu -24 288 4 772 272 125 129 chr5 105677296 105678241 -97407291 + L2 LINE L2 2093 3034 -279 2204 98 3 0 chr5 105678664 105678949 -97406583 + AluSx SINE Alu 1 286 -26 24 32 0 0 chr5 105679451 105679482 -97406050 + AT_rich Low_complexity Low_complexity 1 31 0 577 290 41 31 chr5 105679543 105679833 -97405699 + L1MC4a LINE L1 5593 5885 -1923 36 82 0 0 chr5 105679912 105679997 -97405535 + AT_rich Low_complexity Low_complexity 1 85 0 391 262 99 23 chr5 105680447 105680619 -97404913 + MER5A DNA MER1_type 4 188 -1 39 0 0 0 chr5 105681669 105681708 -97403824 + AT_rich Low_complexity Low_complexity 1 39 0 326 193 83 55 chr5 105681737 105681882 -97403650 - L1MC5 LINE L1 -39 7922 7774 21 36 0 0 chr5 105683267 105683295 -97402237 + AT_rich Low_complexity Low_complexity 1 28 0 2641 9 0 50 chr5 105683555 105683878 -97401654 - AluYa5 SINE Alu -4 307 1 2184 154 3 0 chr5 105685417 105685775 -97399757 - MLT1A1 LTR MaLR 0 365 7 481 335 167 28 chr5 105686078 105686804 -97398728 + L2 LINE L2 1469 2295 -1019 231 203 0 0 chr5 105687132 105687191 -97398341 - L1ME3A LINE L1 -1463 4683 4625 222 118 0 0 chr5 105687191 105687225 -97398307 + (CA)n Simple_repeat Simple_repeat 2 35 0 2047 230 101 47 chr5 105687399 105687792 -97397740 + L1ME3A LINE L1 4744 5115 -1055 690 149 7 92 chr5 105687792 105687933 -97397599 - FLAM_A SINE Alu -4 129 1 2047 230 101 47 chr5 105687933 105688843 -97396689 + L1ME3A LINE L1 5115 6117 -53 21 36 0 0 chr5 105688897 105688925 -97396607 + AT_rich Low_complexity Low_complexity 1 28 0 3137 146 17 31 chr5 105690437 105691041 -97394491 - L1MA6 LINE L1 -3 6297 5703 2201 109 20 0 chr5 105691062 105691356 -97394176 + AluSq SINE Alu 1 300 -13 763 286 48 20 chr5 105691391 105691639 -97393893 - MIR SINE MIR -6 256 2 430 309 72 49 chr5 105691668 105691898 -97393634 + MIR SINE MIR 2 235 -27 577 189 226 32 chr5 105692000 105692217 -97393315 + L1ME3A LINE L1 5912 6170 0 359 291 10 0 chr5 105692330 105692433 -97393099 - MIR SINE MIR -4 258 155 2496 121 52 5 chr5 105693104 105693509 -97392023 + MSTA LTR MaLR 4 427 -1 506 338 105 53 chr5 105696402 105696779 -97388753 + L2 LINE L2 2852 3253 -19 2414 74 7 0 chr5 105696779 105697075 -97388457 - AluSq SINE Alu -15 298 1 506 338 105 53 chr5 105697075 105697096 -97388436 + L2 LINE L2 3253 3271 -1 238 29 44 7 chr5 105697249 105697294 -97388238 + L1PA4 LINE L1 6113 6155 0 525 301 173 33 chr5 105697334 105697815 -97387717 + L1MEd LINE L1 103 650 -5469 352 192 242 17 chr5 105698235 105698355 -97387177 + LTR40a LTR ERVL 1 147 -372 213 94 0 0 chr5 105698455 105698487 -97387045 + (TC)n Simple_repeat Simple_repeat 1 32 0 595 239 26 110 chr5 105698537 105698846 -97386686 + LTR40a LTR ERVL 232 514 -5 2159 110 17 0 chr5 105699098 105699397 -97386135 - AluSx SINE Alu 0 312 9 955 298 80 48 chr5 105699614 105700178 -97385354 + MLT1K LTR MaLR 4 585 -3 2117 133 10 0 chr5 105701185 105701485 -97384047 - AluSq SINE Alu -8 305 3 827 106 0 0 chr5 105701624 105701747 -97383785 - L1PB1 LINE L1 0 6151 6029 1093 267 55 50 chr5 105701909 105702310 -97383222 + L2 LINE L2 2463 2865 -449 599 300 98 52 chr5 105702340 105702707 -97382825 + L2 LINE L2 2928 3311 -2 2185 130 0 0 chr5 105703460 105703768 -97381764 + AluSx SINE Alu 1 308 -4 2385 59 0 3 chr5 105705260 105705563 -97379969 - AluY SINE Alu -9 302 1 408 321 140 55 chr5 105706073 105707037 -97378495 + L2 LINE L2 2217 3261 -11 2319 74 0 0 chr5 105708898 105709202 -97376330 - AluY SINE Alu 0 304 1 379 271 70 32 chr5 105710374 105710541 -97374991 + MIR SINE MIR 1 175 -33 215 311 0 39 chr5 105711010 105711113 -97374419 - MIR SINE MIR -6 256 158 2151 116 10 13 chr5 105711192 105711503 -97374029 - AluSx SINE Alu -2 310 1 451 262 48 0 chr5 105713155 105713281 -97372251 + L2 LINE L2 3167 3298 -15 3919 140 12 22 chr5 105713282 105713620 -97371912 + L1PB4 LINE L1 5493 5822 -334 1421 191 27 38 chr5 105713620 105713913 -97371619 - AluJo SINE Alu -22 290 1 3919 140 12 22 chr5 105713913 105714240 -97371292 + L1PB4 LINE L1 5822 6151 -5 2173 142 47 8 chr5 105715078 105715561 -97369971 + L1PA13 LINE L1 5355 6163 0 844 283 74 8 chr5 105715576 105715929 -97369603 + L1MC4a LINE L1 6535 6910 -898 430 297 28 0 chr5 105715928 105716073 -97369459 + L1MC4 LINE L1 7326 7474 -568 * 1702 50 0 0 chr5 105716398 105716598 -97368934 + AluY SINE Alu 99 298 -13 391 285 0 68 chr5 105716663 105716884 -97368648 - L1M4 LINE L1 -1206 4940 4735 339 317 83 29 chr5 105717011 105717503 -97368029 - L1M4 LINE L1 -1941 4205 3687 498 324 88 40 chr5 105717997 105718451 -97367081 - L1M4 LINE L1 -3196 2950 2475 771 300 75 18 chr5 105718457 105718911 -97366621 + L1ME3A LINE L1 5489 5968 -202 24 32 0 0 chr5 105719089 105719120 -97366412 + AT_rich Low_complexity Low_complexity 1 31 0 1724 161 4 4 chr5 105719255 105719535 -97365997 + AluJo SINE Alu 11 290 -22 433 228 42 39 chr5 105720083 105720284 -97365248 + MER34 LTR ERV1 1 244 -321 609 177 0 55 chr5 105720645 105720683 -97364849 - Charlie1 DNA MER1_type 0 2761 2722 2037 121 7 0 chr5 105720683 105720986 -97364546 + AluSx SINE Alu 1 305 0 609 177 0 55 chr5 105720986 105721109 -97364423 - Charlie1 DNA MER1_type -39 2722 2608 1845 210 75 28 chr5 105721109 105721650 -97363882 + MLT1F1 LTR MaLR 1 567 0 1294 201 22 6 chr5 105721650 105721954 -97363578 - Charlie1 DNA MER1_type -181 2580 2272 1216 189 104 29 chr5 105721959 105722239 -97363293 + AluJo SINE Alu 6 306 -6 734 168 68 6 chr5 105722240 105722389 -97363143 - Charlie1 DNA MER1_type -487 2274 2116 1161 195 72 58 chr5 105722389 105722737 -97362795 - MLT1F1 LTR MaLR -2 565 213 278 264 0 11 chr5 105722925 105723012 -97362520 - MLT1F1 LTR MaLR -481 86 1 * 1535 176 64 87 chr5 105723012 105723461 -97362071 - Charlie1 DNA MER1_type -767 1994 1556 21 36 0 0 chr5 105724201 105724229 -97361303 + AT_rich Low_complexity Low_complexity 1 28 0 761 261 59 10 chr5 105724546 105724749 -97360783 + MIR SINE MIR 34 246 -16 292 246 0 0 chr5 105725218 105725283 -97360249 - L2 LINE L2 0 3313 3249 203 374 32 0 chr5 105725258 105725381 -97360151 - L2 LINE L2 -989 2325 2199 * 21 0 0 0 chr5 105725495 105725516 -97360016 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 105725577 105725600 -97359932 + AT_rich Low_complexity Low_complexity 1 23 0 2171 122 0 0 chr5 105725663 105725957 -97359575 - AluSg SINE Alu -16 294 1 879 120 8 0 chr5 105725961 105726086 -97359446 - AluSq/x SINE Alu -187 126 1 763 199 19 0 chr5 105726086 105726247 -97359285 - L1MD2 LINE L1 -101 6258 6095 281 222 125 0 chr5 105726447 105726519 -97359013 + MIR3 SINE MIR 128 208 0 29 60 0 0 chr5 105726785 105726835 -97358697 + AT_rich Low_complexity Low_complexity 1 50 0 236 340 122 13 chr5 105727751 105727907 -97357625 - MIR SINE MIR -87 175 3 1712 193 0 16 chr5 105727950 105728261 -97357271 + AluJo SINE Alu 1 306 -6 197 311 148 0 chr5 105728595 105728656 -97356876 - L2 LINE L2 -5 3267 3198 2037 148 0 3 chr5 105728708 105729013 -97356519 + AluSx SINE Alu 1 304 -8 246 105 0 0 chr5 105729409 105729447 -97356085 + (CA)n Simple_repeat Simple_repeat 1 38 0 189 0 0 0 chr5 105729993 105730014 -97355518 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1012 176 64 147 chr5 105730017 105730306 -97355226 - MLT1A2 LTR MaLR 0 374 127 1819 148 3 72 chr5 105730306 105730624 -97354908 - AluJb SINE Alu -16 296 1 1012 176 64 147 chr5 105730624 105730742 -97354790 - MLT1A2 LTR MaLR -247 127 1 2261 108 121 23 chr5 105731567 105731955 -97353577 + MSTA LTR MaLR 3 428 0 337 267 84 59 chr5 105732203 105732405 -97353127 - L1 LINE L1 -1830 4316 4110 663 313 140 25 chr5 105732472 105733080 -97352452 - L2 LINE L2 -1000 2314 1637 1041 279 149 21 chr5 105733143 105733325 -97352207 + L1ME3A LINE L1 4463 4620 -1544 2295 98 0 0 chr5 105733325 105733621 -97351911 + AluSc SINE Alu 1 296 -13 1041 279 149 21 chr5 105733621 105734364 -97351168 + L1ME3A LINE L1 4620 5517 -647 4379 88 2 3 chr5 105734384 105734995 -97350537 + THE1B-int LTR MaLR 971 1580 0 2309 108 90 0 chr5 105734995 105735329 -97350203 + THE1B LTR MaLR 1 364 0 1574 174 25 16 chr5 105735357 105735666 -97349866 + MLT2D LTR ERVL 74 479 -41 281 292 34 0 chr5 105735667 105735756 -97349776 + (TATATG)n Simple_repeat Simple_repeat 4 95 0 191 111 0 28 chr5 105735756 105735792 -97349740 + (CA)n Simple_repeat Simple_repeat 2 36 0 498 257 56 14 chr5 105735889 105736033 -97349499 - LTR33 LTR ERVL -359 162 13 399 271 160 27 chr5 105736038 105736247 -97349285 + L1ME3A LINE L1 5934 6170 0 629 314 143 55 chr5 105736511 105737595 -97347937 - L2 LINE L2 -1638 1676 498 2102 92 21 0 chr5 105740782 105741066 -97344466 - AluSg SINE Alu -20 290 1 1383 102 0 23 chr5 105741382 105741597 -97343935 + MER30 DNA MER1_type 20 229 -1 188 35 35 0 chr5 105741823 105741852 -97343680 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1152 230 187 27 chr5 105742136 105742809 -97342723 - Charlie7 DNA MER1_type 0 2612 1832 283 266 16 0 chr5 105742810 105742874 -97342658 + MIR SINE MIR 15 79 -183 964 83 0 0 chr5 105742877 105742997 -97342535 - AluSq SINE Alu -138 175 56 732 208 14 0 chr5 105743021 105743165 -97342367 + MIR SINE MIR 92 237 -25 609 190 121 0 chr5 105743193 105743309 -97342223 + FLAM_A SINE Alu 1 130 -3 721 241 43 23 chr5 105743380 105743637 -97341895 + L1ME3A LINE L1 5690 5951 -219 25 0 0 0 chr5 105743843 105743868 -97341664 + AT_rich Low_complexity Low_complexity 1 25 0 2211 251 103 67 chr5 105743937 105745329 -97340203 - Charlie7 DNA MER1_type -1135 1477 35 353 278 99 14 chr5 105746098 105746323 -97339209 - MLT1J2 LTR MaLR -14 436 193 336 282 77 0 chr5 105746352 105746469 -97339063 - MLT1J1 LTR MaLR -315 131 6 215 265 38 143 chr5 105746533 105746771 -97338761 + L2 LINE L2 2842 3054 -218 4120 111 21 2 chr5 105746946 105747569 -97337963 + MER41B LTR ERV1 1 635 0 1528 186 38 9 chr5 105747853 105748198 -97337334 - L1MB2 LINE L1 -62 6109 5755 23 0 0 0 chr5 105749416 105749439 -97336093 + GC_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 105751041 105751069 -97334463 + AT_rich Low_complexity Low_complexity 1 28 0 616 304 73 24 chr5 105752184 105752431 -97333101 + MIR SINE MIR 3 261 -1 1527 179 4 8 chr5 105754143 105754411 -97331121 + AluSx SINE Alu 1 267 -45 22 0 0 0 chr5 105755105 105755127 -97330405 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 105756004 105756026 -97329506 + AT_rich Low_complexity Low_complexity 1 22 0 255 219 21 42 chr5 105756043 105756139 -97329393 - L1ME3 LINE L1 -1 6161 6068 1417 208 15 15 chr5 105756241 105756631 -97328901 - L1ME3 LINE L1 -96 6066 5586 284 348 110 37 chr5 105756652 105756826 -97328706 + L2 LINE L2 1714 1874 -1440 2010 157 67 13 chr5 105756826 105757202 -97328330 + MSTD LTR MaLR 1 396 0 284 348 110 37 chr5 105757202 105757544 -97327988 + L2 LINE L2 1874 2268 -1046 1088 225 161 10 chr5 105757871 105758169 -97327363 - MER69 DNA AcHobo -2183 343 1 180 293 0 0 chr5 105758211 105758252 -97327280 + L2 LINE L2 2687 2727 -587 597 214 9 129 chr5 105758362 105758551 -97326981 - L1MC4 LINE L1 -130 7912 7781 2380 97 0 0 chr5 105758551 105758860 -97326672 + AluY SINE Alu 1 309 -2 597 214 9 129 chr5 105758860 105759011 -97326521 - L1MC4 LINE L1 -261 7781 7613 747 202 16 0 chr5 105759033 105759162 -97326370 - FLAM_A SINE Alu 0 133 3 770 281 44 85 chr5 105759295 105759800 -97325732 - L1MC4 LINE L1 -860 7182 6699 686 300 131 24 chr5 105760074 105760571 -97324961 + L2 LINE L2 1765 2314 -1000 337 267 84 59 chr5 105760638 105760840 -97324692 + L1 LINE L1 4110 4316 -1830 2252 110 121 23 chr5 105761088 105761478 -97324054 - MSTA LTR MaLR 0 428 1 256 250 49 42 chr5 105761754 105761898 -97323634 + L1 LINE L1 4378 4522 -1624 1935 213 41 55 chr5 105761898 105762465 -97323067 - MLT1G LTR MaLR 0 590 32 1719 125 8 4 chr5 105762684 105762940 -97322592 + HERVS71 LTR ERV1 1893 2149 -6829 24 0 0 0 chr5 105763240 105763264 -97322268 + AT_rich Low_complexity Low_complexity 1 24 0 457 277 102 11 chr5 105763272 105763449 -97322083 - L1MEd LINE L1 -5469 650 458 255 257 0 79 chr5 105763652 105763753 -97321779 - L1MEd LINE L1 -5924 195 103 238 29 44 7 chr5 105763792 105763837 -97321695 - L1PA4 LINE L1 0 6155 6113 508 344 96 52 chr5 105763990 105764011 -97321521 - L2 LINE L2 -1 3271 3252 2416 74 7 0 chr5 105764011 105764307 -97321225 + AluSq SINE Alu 1 298 -15 508 344 96 52 chr5 105764307 105764669 -97320863 - L2 LINE L2 -20 3252 2871 647 328 170 28 chr5 105764700 105765620 -97319912 - L2 LINE L2 -1638 1676 627 8123 86 0 1 chr5 105765820 105766911 -97318621 - HERVS71 LTR ERV1 -1819 7159 6070 3353 111 6 0 chr5 105766910 105767748 -97317784 - HERVS71 LTR ERV1 -3305 5673 4803 * 8543 94 11 2 chr5 105767730 105768948 -97316584 - HERVS71 LTR ERV1 -5742 3236 2008 1224 247 102 5 chr5 105769156 105769597 -97315935 - L1MC4 LINE L1 -860 7182 6699 367 279 11 70 chr5 105769848 105770135 -97315397 - HAL1 LINE L1 -1237 1270 1001 2422 81 3 0 chr5 105770158 105770468 -97315064 + AluY SINE Alu 1 311 0 612 207 17 6 chr5 105770975 105771081 -97314451 + CT-rich Low_complexity Low_complexity 3 113 -65 1989 152 7 3 chr5 105771081 105771377 -97314155 - AluSx SINE Alu -15 297 1 612 207 17 6 chr5 105771377 105771444 -97314088 + CT-rich Low_complexity Low_complexity 113 178 0 359 319 133 86 chr5 105771568 105771906 -97313626 + L2 LINE L2 2919 3272 0 194 0 39 0 chr5 105772120 105772146 -97313386 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1945 152 0 7 chr5 105772159 105772469 -97313063 + AluJb SINE Alu 1 308 -4 614 221 18 0 chr5 105772490 105772603 -97312929 - FLAM_A SINE Alu -18 115 1 384 283 28 0 chr5 105774083 105774189 -97311343 + MIR3 SINE MIR 66 174 -34 950 270 32 45 chr5 105774370 105774811 -97310721 + LTR16A LTR ERVL 16 450 0 23 0 0 0 chr5 105776013 105776036 -97309496 + AT_rich Low_complexity Low_complexity 1 23 0 225 300 14 0 chr5 105777233 105777303 -97308229 + CT-rich Low_complexity Low_complexity 2 72 0 2081 247 50 38 chr5 105777589 105777753 -97307779 + MER115 DNA AcHobo 1 162 -531 1061 191 10 14 chr5 105777753 105777962 -97307570 - MER3 DNA MER1_type 0 209 2 2081 247 50 38 chr5 105777962 105778482 -97307050 + MER115 DNA AcHobo 162 693 0 757 200 0 15 chr5 105778717 105778852 -97306680 + FLAM_A SINE Alu 1 133 0 2907 117 61 13 chr5 105778916 105779393 -97306139 - L1PA15 LINE L1 -13 6152 5653 191 179 26 26 chr5 105779792 105779831 -97305701 - MER5A DNA MER1_type 0 189 151 * 254 297 66 0 chr5 105779813 105779904 -97305628 + MER5A DNA MER1_type 71 167 -22 * 386 260 39 19 chr5 105779834 105779938 -97305594 - MER5A DNA MER1_type -83 106 1 583 255 71 64 chr5 105779976 105780222 -97305310 + L1MC4 LINE L1 7594 7837 -205 2375 57 0 20 chr5 105780222 105780523 -97305009 + AluY SINE Alu 3 297 -14 583 255 71 64 chr5 105780523 105780574 -97304958 + L1MC4 LINE L1 7837 7886 -156 405 95 0 0 chr5 105780574 105780637 -97304895 + (TG)n Simple_repeat Simple_repeat 2 64 0 583 255 71 64 chr5 105780637 105780773 -97304759 + L1MC4 LINE L1 7886 8031 -11 22 35 0 0 chr5 105780792 105780821 -97304711 + AT_rich Low_complexity Low_complexity 1 29 0 1792 122 69 0 chr5 105781200 105781491 -97304041 + AluSx SINE Alu 3 311 0 248 226 0 48 chr5 105782578 105782662 -97302870 - MER116 DNA Mariner 0 80 1 27 29 0 0 chr5 105782662 105782696 -97302836 + AT_rich Low_complexity Low_complexity 1 34 0 4384 151 13 8 chr5 105783354 105784150 -97301382 - L1MB3 LINE L1 -4 6179 5380 368 260 197 8 chr5 105786075 105786202 -97299330 - MER5A DNA MER1_type 0 189 39 708 161 8 0 chr5 105788102 105788226 -97297306 + L1MB1 LINE L1 6036 6160 -8 1822 105 0 0 chr5 105788701 105788939 -97296593 - AluSg/x SINE Alu 0 310 73 540 229 33 60 chr5 105788965 105789148 -97296384 - MER5B DNA MER1_type 0 178 1 401 188 52 10 chr5 105789440 105789536 -97295996 - MER63A DNA MER1_type 0 210 111 365 189 95 0 chr5 105789882 105789956 -97295576 - MIR SINE MIR -90 118 38 251 295 47 39 chr5 105790041 105790170 -97295362 - L2 LINE L2 -586 2728 2599 252 0 0 0 chr5 105791173 105791201 -97294331 + (TG)n Simple_repeat Simple_repeat 1 28 0 1674 179 11 4 chr5 105791201 105791480 -97294052 - AluJb SINE Alu -31 281 1 370 329 175 0 chr5 105792886 105793029 -97292503 + MIR3 SINE MIR 30 197 -11 2457 60 0 3 chr5 105793032 105793332 -97292200 - AluY SINE Alu -12 299 1 204 182 0 0 chr5 105793967 105794011 -97291521 + A-rich Low_complexity Low_complexity 1 44 0 1840 150 29 0 chr5 105794307 105794587 -97290945 + AluSx SINE Alu 1 288 -24 1965 148 27 0 chr5 105794703 105795000 -97290532 - AluSx SINE Alu -7 305 1 27 29 0 0 chr5 105795706 105795740 -97289792 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 105795808 105795832 -97289700 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr5 105798282 105798324 -97287208 + AT_rich Low_complexity Low_complexity 1 42 0 281 288 45 27 chr5 105800860 105800971 -97284561 + MIR SINE MIR 40 152 -56 538 249 159 63 chr5 105801552 105802151 -97283381 - L1ME4a LINE L1 -9 6112 5457 802 218 0 0 chr5 105802580 105802727 -97282805 + MER46A DNA MER2_type 2 148 -88 294 95 0 0 chr5 105802763 105802805 -97282727 + (TA)n Simple_repeat Simple_repeat 1 42 0 509 110 0 12 chr5 105802856 105802938 -97282594 + MER46A DNA MER2_type 156 236 0 26 0 0 0 chr5 105803190 105803216 -97282316 + AT_rich Low_complexity Low_complexity 1 26 0 1984 161 3 0 chr5 105803495 105803806 -97281726 + AluSx SINE Alu 1 312 0 35 41 0 0 chr5 105803806 105803855 -97281677 + AT_rich Low_complexity Low_complexity 1 49 0 282 365 50 6 chr5 105804046 105804205 -97281327 + MIR SINE MIR 46 211 -51 1916 158 3 10 chr5 105805205 105805503 -97280029 + AluSx SINE Alu 1 296 -16 1843 187 3 11 chr5 105805506 105805853 -97279679 + MER2 DNA MER2_type 1 344 0 201 418 16 0 chr5 105806634 105806756 -97278776 + L2 LINE L2 3140 3263 -9 2068 126 11 0 chr5 105808941 105809227 -97276305 + AluSx SINE Alu 1 289 -23 1266 116 5 54 chr5 105809725 105809897 -97275635 + L1MB3 LINE L1 5971 6131 -52 2473 78 0 7 chr5 105809897 105810205 -97275327 + AluY SINE Alu 1 306 -5 1266 116 5 54 chr5 105810205 105810256 -97275276 + L1MB3 LINE L1 6131 6183 0 227 281 167 9 chr5 105810309 105810423 -97275109 + L3b LINE CR1 1351 1482 -101 2120 113 3 10 chr5 105810439 105810791 -97274741 - AluSc SINE Alu 0 350 1 939 129 8 0 chr5 105810814 105810990 -97274542 + FLAM_C SINE Alu 1 177 0 33 56 0 0 chr5 105811364 105811418 -97274114 + AT_rich Low_complexity Low_complexity 1 54 0 249 340 32 0 chr5 105812220 105812314 -97273218 - L3 LINE CR1 -588 989 893 288 279 110 36 chr5 105812318 105812537 -97272995 - L3 LINE CR1 -789 788 554 2494 60 0 10 chr5 105812680 105812979 -97272553 + AluY SINE Alu 1 296 -15 2192 154 28 39 chr5 105814948 105815410 -97270122 + L1MB4 LINE L1 5720 6176 -4 204 200 0 0 chr5 105817059 105817104 -97268428 + GA-rich Low_complexity Low_complexity 6 50 0 704 147 0 17 chr5 105817268 105817384 -97268148 + FLAM_A SINE Alu 23 136 -6 427 280 187 9 chr5 105818165 105818390 -97267142 + Charlie8 DNA MER1_type 6 270 -2147 1362 124 0 69 chr5 105819003 105819221 -97266311 - AluSx SINE Alu -109 203 1 1180 89 6 0 chr5 105819223 105819381 -97266151 - MER41B LTR ERV1 -476 159 1 247 265 59 0 chr5 105819383 105819451 -97266081 + HAL1 LINE L1 1705 1776 -731 1274 71 0 0 chr5 105819607 105819808 -97265724 + AluY SINE Alu 127 327 0 375 260 34 83 chr5 105819819 105819886 -97265646 + HAL1 LINE L1 2024 2093 -414 2377 91 0 7 chr5 105819886 105820194 -97265338 + AluSc SINE Alu 1 306 -3 375 260 34 83 chr5 105820194 105820330 -97265202 + HAL1 LINE L1 2093 2217 -290 809 213 44 0 chr5 105821172 105821332 -97264200 + MER45A DNA AcHobo 1 167 -11 2276 111 3 0 chr5 105822196 105822494 -97263038 + AluSq SINE Alu 1 299 -14 456 220 123 148 chr5 105825431 105825877 -97259655 - LTR8A LTR ERV1 -292 435 1 22 0 0 0 chr5 105825891 105825913 -97259619 + AT_rich Low_complexity Low_complexity 1 22 0 2023 218 60 17 chr5 105826477 105826945 -97258587 + MLT1D LTR MaLR 1 488 -17 682 167 5 176 chr5 105827028 105827084 -97258448 - MER5A DNA MER1_type -1 188 124 651 197 8 8 chr5 105827084 105827211 -97258321 + FLAM_A SINE Alu 1 127 -6 2489 73 3 0 chr5 105827215 105827518 -97258014 + AluSp SINE Alu 1 304 -9 682 167 5 176 chr5 105827518 105827678 -97257854 - MER5A DNA MER1_type -68 121 5 3021 200 45 10 chr5 105828184 105828800 -97256732 + LTR9B LTR ERV1 7 644 0 1843 140 58 0 chr5 105829737 105830015 -97255517 - AluSx SINE Alu -18 294 1 546 265 54 31 chr5 105830726 105830949 -97254583 + MIR SINE MIR 15 242 -20 284 233 82 0 chr5 105831045 105831118 -97254414 - MIR SINE MIR -156 106 28 26 30 0 0 chr5 105831578 105831611 -97253921 + AT_rich Low_complexity Low_complexity 1 33 0 213 358 0 0 chr5 105831657 105831731 -97253801 - MIR SINE MIR -108 100 27 210 191 0 0 chr5 105831833 105831875 -97253657 + GA-rich Low_complexity Low_complexity 2 43 0 434 294 117 52 chr5 105831903 105832365 -97253167 + Tigger4(Zombi) DNA MER2_type 1198 1689 -1042 2381 138 3 6 chr5 105832465 105832828 -97252704 - MLT1A1 LTR MaLR 0 365 4 298 244 26 0 chr5 105832985 105833063 -97252469 - MER103 DNA DNA -19 147 68 1919 135 3 52 chr5 105833198 105833388 -97252144 - AluSx SINE Alu -1 311 142 2303 92 0 13 chr5 105833388 105833694 -97251838 - AluSx SINE Alu -10 302 1 1919 135 3 52 chr5 105833694 105833830 -97251702 - AluSx SINE Alu -170 142 1 1029 92 7 65 chr5 105834273 105834426 -97251106 - AluSx SINE Alu -137 175 32 22 70 0 0 chr5 105834754 105834797 -97250735 + AT_rich Low_complexity Low_complexity 1 43 0 1976 163 0 3 chr5 105834927 105835228 -97250304 + AluSx SINE Alu 1 300 -12 284 309 141 16 chr5 105837079 105837270 -97248262 + HAL1 LINE L1 531 745 -1762 593 252 168 19 chr5 105837293 105837448 -97248084 - L2 LINE L2 0 3313 3182 1718 142 6 92 chr5 105837448 105837786 -97247746 + AluSx SINE Alu 1 309 -3 593 252 168 19 chr5 105837786 105837892 -97247640 - L2 LINE L2 -131 3182 3013 570 248 22 15 chr5 105837902 105838039 -97247493 + HAL1 LINE L1 754 891 -1616 490 285 26 57 chr5 105838090 105838283 -97247249 + MLT1J LTR MaLR 13 199 -312 5120 156 24 41 chr5 105838389 105839374 -97246158 + LTR5 LTR ERVK 1 969 0 487 185 31 31 chr5 105839396 105839526 -97246006 + HAL1 LINE L1 1750 1879 -628 2189 118 0 0 chr5 105840390 105840679 -97244853 - AluSg SINE Alu -21 289 1 202 262 0 0 chr5 105841019 105841061 -97244471 - MER91 DNA MER1_type -148 42 1 608 280 170 19 chr5 105843280 105843741 -97241791 + L2 LINE L2 2750 3308 -5 1797 164 0 4 chr5 105844567 105844842 -97240690 + AluJb SINE Alu 1 274 -38 1147 244 114 28 chr5 105846019 105846706 -97238826 + L2 LINE L2 2552 3300 -13 1044 156 35 20 chr5 105846706 105846905 -97238627 + L1MCa LINE L1 1718 1919 -4507 2567 62 3 0 chr5 105847053 105847358 -97238174 + AluY SINE Alu 1 306 -5 1979 132 7 10 chr5 105847515 105847811 -97237721 + AluJo SINE Alu 11 305 -7 1871 126 100 0 chr5 105847871 105848142 -97237390 + AluSq SINE Alu 1 298 -15 641 203 17 51 chr5 105848218 105848271 -97237261 - MER5B DNA MER1_type -7 171 118 2037 112 52 0 chr5 105848271 105848558 -97236974 + AluSq SINE Alu 3 304 -9 641 203 17 51 chr5 105848558 105848681 -97236851 - MER5B DNA MER1_type -60 118 1 265 281 109 8 chr5 105849212 105849340 -97236192 - MIR3 SINE MIR -33 175 35 576 282 65 25 chr5 105850674 105850919 -97234613 + MER102a DNA MER1_type 76 330 0 2697 49 0 0 chr5 105852587 105852891 -97232641 - AluY SINE Alu -7 304 1 2046 121 7 0 chr5 105853669 105853977 -97231555 + AluSg SINE Alu 1 310 0 2813 128 2 34 chr5 105854091 105854176 -97231356 + MER61B LTR ERV1 4 90 -335 2112 109 0 11 chr5 105854176 105854461 -97231071 + AluSq SINE Alu 29 310 -3 2813 128 2 34 chr5 105854461 105854811 -97230721 + MER61B LTR ERV1 90 425 0 337 329 82 65 chr5 105854812 105855168 -97230364 + L2 LINE L2 2859 3220 -52 214 334 121 86 chr5 105855196 105855510 -97230022 - L2 LINE L2 -3 3269 2945 356 317 29 0 chr5 105856232 105856336 -97229196 - MIR SINE MIR -2 260 154 448 305 50 58 chr5 105856533 105856682 -97228850 - MLT1L LTR MaLR -356 259 111 7747 26 16 0 chr5 105856682 105857684 -97227848 - L1PA3 LINE L1 0 6155 5150 448 305 50 58 chr5 105857684 105857793 -97227739 - MLT1L LTR MaLR -504 111 3 392 295 60 18 chr5 105857961 105858127 -97227405 - MIR SINE MIR -69 193 21 201 268 0 0 chr5 105858181 105858222 -97227310 - MIR3 SINE MIR -27 181 141 320 277 173 79 chr5 105858859 105859061 -97226471 + L1MC4a LINE L1 5716 5936 -1872 301 224 8 149 chr5 105860924 105861058 -97224474 + L1MC/D LINE L1 5678 5792 -2016 1730 62 9 0 chr5 105862119 105862344 -97223188 - AluSc SINE Alu -9 300 74 209 244 58 0 chr5 105862745 105862831 -97222701 + (TA)n Simple_repeat Simple_repeat 2 92 0 198 71 0 0 chr5 105863191 105863219 -97222313 + (GA)n Simple_repeat Simple_repeat 1 28 0 2126 127 0 13 chr5 105864500 105864816 -97220716 + AluSx SINE Alu 1 312 0 391 232 42 0 chr5 105866780 105866875 -97218657 + MER5B DNA MER1_type 6 104 -74 2112 89 34 0 chr5 105867865 105868158 -97217374 - AluSc SINE Alu -6 303 1 265 224 13 26 chr5 105868768 105868844 -97216688 - L1ME LINE L1 -299 5822 5748 463 318 61 20 chr5 105870660 105870905 -97214627 + MIR SINE MIR 2 256 -6 261 0 0 0 chr5 105871249 105871278 -97214254 + (A)n Simple_repeat Simple_repeat 1 29 0 617 284 71 9 chr5 105871862 105872087 -97213445 + MLT1K LTR MaLR 323 561 -27 1906 137 51 43 chr5 105872744 105873116 -97212416 - THE1C LTR MaLR 0 375 1 283 211 99 0 chr5 105873165 105873236 -97212296 + MIR3 SINE MIR 83 160 -48 2052 110 0 0 chr5 105873420 105873710 -97211822 + AluSx SINE Alu 1 290 -22 465 339 56 15 chr5 105875159 105875501 -97210031 + MARNA DNA Mariner 3 358 -228 24 53 0 0 chr5 105876010 105876048 -97209484 + AT_rich Low_complexity Low_complexity 1 38 0 492 250 178 20 chr5 105876096 105876248 -97209284 + MIR SINE MIR 8 183 -79 1983 135 0 0 chr5 105876647 105876943 -97208589 - AluSx SINE Alu -16 296 1 258 105 0 0 chr5 105876999 105877037 -97208495 + (TCCA)n Simple_repeat Simple_repeat 2 39 0 314 289 22 22 chr5 105877072 105877162 -97208370 + MIR SINE MIR 172 261 -1 27 62 0 0 chr5 105877425 105877473 -97208059 + AT_rich Low_complexity Low_complexity 1 48 0 2020 125 10 0 chr5 105877510 105877805 -97207727 - AluSx SINE Alu -14 298 1 7087 108 141 121 chr5 105878417 105880079 -97205453 + pTR5 LTR ERV1 743 2438 0 912 109 36 0 chr5 105880632 105880769 -97204763 - AluSg/x SINE Alu -14 295 154 450 286 77 108 chr5 105880883 105881404 -97204128 - LTR67 LTR ERVL -51 506 2 282 116 0 0 chr5 105881475 105881518 -97204014 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 266 215 103 93 chr5 105881518 105881538 -97203994 - L2 LINE L2 -12 3260 3242 1517 230 104 46 chr5 105881538 105882059 -97203473 - MLT1H1 LTR MaLR 0 555 5 266 215 103 93 chr5 105882059 105882145 -97203387 - L2 LINE L2 -30 3242 3153 2360 70 0 3 chr5 105882404 105882706 -97202826 - AluY SINE Alu -10 301 1 1308 167 29 58 chr5 105883301 105883613 -97201919 - L1MC2 LINE L1 -1 6343 6041 213 39 0 0 chr5 105884461 105884487 -97201045 + (T)n Simple_repeat Simple_repeat 1 26 0 196 281 61 12 chr5 105884679 105884761 -97200771 - MIR SINE MIR -162 100 15 720 258 10 38 chr5 105885168 105885377 -97200155 + MIR SINE MIR 60 262 0 2211 96 30 0 chr5 105888084 105888386 -97197146 + AluSq SINE Alu 1 311 -2 202 114 29 0 chr5 105888399 105888434 -97197098 + (TG)n Simple_repeat Simple_repeat 1 36 0 197 332 53 30 chr5 105888608 105888736 -97196796 - MIR SINE MIR -64 144 23 320 198 0 12 chr5 105891417 105891498 -97194034 + (TA)n Simple_repeat Simple_repeat 2 81 0 201 213 21 0 chr5 105893241 105893288 -97192244 + (TA)n Simple_repeat Simple_repeat 2 49 0 2076 116 0 3 chr5 105893536 105893839 -97191693 - AluSq SINE Alu -11 302 1 1436 203 135 27 chr5 105894899 105895201 -97190331 - Charlie4a DNA MER1_type -1478 483 123 2123 174 25 50 chr5 105895201 105895400 -97190132 + MSTB1 LTR MaLR 1 203 -229 2096 93 17 7 chr5 105895400 105895689 -97189843 + AluSq SINE Alu 1 292 -21 2123 174 25 50 chr5 105895689 105895932 -97189600 + MSTB1 LTR MaLR 203 432 0 1436 203 135 27 chr5 105895932 105896043 -97189489 - Charlie4a DNA MER1_type -1838 123 25 622 126 151 34 chr5 105896483 105896586 -97188946 + FLAM_C SINE Alu 1 90 -212 225 0 0 0 chr5 105896586 105896611 -97188921 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1723 122 80 11 chr5 105896612 105896898 -97188634 + AluSx SINE Alu 5 310 -2 622 126 151 34 chr5 105896898 105896911 -97188621 + FLAM_C SINE Alu 89 133 -169 191 152 22 0 chr5 105897400 105897446 -97188086 + (TA)n Simple_repeat Simple_repeat 2 48 0 1883 149 7 0 chr5 105898924 105899220 -97186312 - AluSx SINE Alu -14 298 1 287 268 106 70 chr5 105899326 105899468 -97186064 - MIR SINE MIR -6 256 110 846 164 89 0 chr5 105899885 105900031 -97185501 + FRAM SINE Alu 16 174 -2 296 111 0 74 chr5 105900472 105900553 -97184979 + (TTTCC)n Simple_repeat Simple_repeat 1 75 0 1953 134 13 0 chr5 105900565 105900863 -97184669 - AluSx SINE Alu -10 302 1 832 227 91 54 chr5 105901018 105901260 -97184272 + MIR SINE MIR 7 257 -5 434 237 85 8 chr5 105901314 105901432 -97184100 + L2 LINE L2 3187 3313 0 1692 185 104 53 chr5 105901779 105902173 -97183359 + MLT1F1 LTR MaLR 144 557 -10 21 0 0 0 chr5 105902792 105902813 -97182719 + AT_rich Low_complexity Low_complexity 1 21 0 2116 91 7 7 chr5 105902939 105903236 -97182296 + AluSx SINE Alu 1 297 -15 2141 94 3 3 chr5 105903485 105903782 -97181750 + AluY SINE Alu 1 297 -14 617 243 8 39 chr5 105903898 105904074 -97181458 - MER5B DNA MER1_type -3 175 15 352 292 21 56 chr5 105904072 105904216 -97181316 + MER5A DNA MER1_type 28 166 -23 * 826 203 6 19 chr5 105904089 105904247 -97181285 - MER5A DNA MER1_type -28 161 6 1994 129 0 0 chr5 105904841 105905144 -97180388 - AluSx SINE Alu -9 303 1 2458 48 0 7 chr5 105905290 105905599 -97179933 + AluY SINE Alu 1 307 -4 212 263 40 40 chr5 105906553 105906629 -97178903 + L2 LINE L2 3221 3296 -17 209 331 39 39 chr5 105907779 105907909 -97177623 - MIR SINE MIR -112 150 21 2294 80 0 46 chr5 105908671 105908996 -97176536 + AluSg SINE Alu 1 310 0 351 262 192 5 chr5 105909223 105909437 -97176095 - MIR SINE MIR 0 262 9 2091 146 113 20 chr5 105909780 105910034 -97175498 - MSTB LTR MaLR 0 426 122 198 0 0 0 chr5 105910034 105910056 -97175476 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 2091 146 113 20 chr5 105910056 105910191 -97175341 - MSTB LTR MaLR -304 122 1 628 330 43 66 chr5 105910362 105910804 -97174728 - L2 LINE L2 0 3272 2841 627 236 236 5 chr5 105912138 105912350 -97173182 + MIR SINE MIR 2 262 0 376 263 11 21 chr5 105914191 105914286 -97171246 - MER5A DNA MER1_type 0 189 96 651 238 95 19 chr5 105916667 105916877 -97168655 + L1MC/D LINE L1 5529 5754 -2054 276 255 248 0 chr5 105917050 105917191 -97168341 + MER104 DNA Tc2 5 180 0 524 221 131 14 chr5 105917376 105917521 -97168011 - MIR SINE MIR -27 235 74 2248 111 0 0 chr5 105919593 105919890 -97165642 - AluSx SINE Alu -15 297 1 2410 63 0 3 chr5 105920829 105921128 -97164404 - AluY SINE Alu -13 298 1 2013 88 44 7 chr5 105921424 105921697 -97163835 + AluSq SINE Alu 14 296 -17 224 159 58 0 chr5 105926399 105926468 -97159064 + A-rich Low_complexity Low_complexity 4 76 0 469 281 59 49 chr5 105927928 105928131 -97157401 + MIR3 SINE MIR 1 205 -3 1784 134 38 3 chr5 105928851 105929164 -97156368 - MER44D DNA MER2_type 0 605 227 392 178 0 0 chr5 105929176 105929249 -97156283 + Tigger7 DNA MER2_type 254 326 -2161 * 1388 194 28 0 chr5 105929247 105929495 -97156037 - Tigger7 DNA MER2_type -478 255 1 1892 156 10 29 chr5 105930211 105930525 -97155007 - AluJb SINE Alu 0 312 5 1132 286 43 54 chr5 105930556 105930652 -97154880 + L2 LINE L2 1963 2059 -1255 2263 97 3 38 chr5 105930652 105930972 -97154560 - AluSg SINE Alu -1 309 1 1132 286 43 54 chr5 105930972 105931435 -97154097 + L2 LINE L2 2059 2516 -798 443 229 115 0 chr5 105931628 105931750 -97153782 + L2 LINE L2 3178 3313 0 364 265 10 0 chr5 105932305 105932407 -97153125 + MIR SINE MIR 160 262 0 531 272 68 12 chr5 105932431 105932593 -97152939 - MER5B DNA MER1_type 0 178 8 204 111 0 0 chr5 105932699 105932735 -97152797 + (TA)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr5 105934721 105934741 -97150791 + (TA)n Simple_repeat Simple_repeat 2 21 0 204 40 0 0 chr5 105934787 105934812 -97150720 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 308 282 127 0 chr5 105935656 105935766 -97149766 - MIR SINE MIR -22 240 117 214 271 21 0 chr5 105935912 105935960 -97149572 + L2 LINE L2 3151 3199 -73 255 255 78 69 chr5 105937553 105937655 -97147877 - MIR3 SINE MIR -11 197 95 423 254 40 16 chr5 105938401 105938527 -97147005 + MIR SINE MIR 134 262 0 2269 83 0 33 chr5 105938788 105939090 -97146442 - AluSc SINE Alu -17 292 1 464 265 88 19 chr5 105939132 105939347 -97146185 + L3b LINE CR1 1107 1336 -247 31 0 0 0 chr5 105941810 105941841 -97143691 + AT_rich Low_complexity Low_complexity 1 31 0 1856 159 30 0 chr5 105942016 105942311 -97143221 + AluJb SINE Alu 1 304 -8 2358 80 3 0 chr5 105942557 105942844 -97142688 - AluSc SINE Alu -21 288 1 423 326 205 35 chr5 105942918 105944130 -97141402 - L2 LINE L2 -1 3271 1814 314 321 191 30 chr5 105945415 105945583 -97139949 + MIR3 SINE MIR 12 206 -2 731 199 55 20 chr5 105945583 105945784 -97139748 + MER3 DNA MER1_type 2 209 0 186 43 0 0 chr5 105946322 105946345 -97139187 + (T)n Simple_repeat Simple_repeat 1 23 0 192 324 105 19 chr5 105946639 105946744 -97138788 + L2 LINE L2 3200 3313 0 1504 67 0 39 chr5 105947700 105947960 -97137572 - AluSg/x SINE Alu 0 309 98 232 344 57 25 chr5 105947991 105948113 -97137419 + L2 LINE L2 3134 3259 -13 289 176 0 0 chr5 105948615 105948666 -97136866 + L2 LINE L2 3263 3313 0 2280 79 10 0 chr5 105949519 105949809 -97135723 - AluY SINE Alu -18 293 1 708 185 266 0 chr5 105950333 105950506 -97135026 + MER20 DNA MER1_type 1 219 0 861 160 0 0 chr5 105950550 105950681 -97134851 + FLAM_C SINE Alu 1 131 -2 23 33 0 0 chr5 105951996 105952026 -97133506 + AT_rich Low_complexity Low_complexity 1 30 0 199 256 200 64 chr5 105952730 105952855 -97132677 - MIR3 SINE MIR -25 183 42 572 249 64 17 chr5 105952869 105953042 -97132490 + L2 LINE L2 3128 3308 -5 284 177 81 0 chr5 105953153 105953215 -97132317 + MER103 DNA DNA 11 77 -89 21 0 0 0 chr5 105953935 105953956 -97131576 + AT_rich Low_complexity Low_complexity 1 21 0 422 226 47 19 chr5 105954494 105954600 -97130932 - L2 LINE L2 0 3313 3205 511 265 159 0 chr5 105954614 105954784 -97130748 - L2 LINE L2 -701 2613 2417 260 274 4 40 chr5 105954811 105955069 -97130463 + (CATA)n Simple_repeat Simple_repeat 1 248 0 270 255 0 58 chr5 105955081 105955269 -97130263 + (CATA)n Simple_repeat Simple_repeat 4 180 0 267 278 70 164 chr5 105956419 105956693 -97128839 + L2 LINE L2 2955 3192 -80 2420 78 0 0 chr5 105956693 105956988 -97128544 - AluSg SINE Alu -15 295 1 267 278 70 164 chr5 105956988 105957055 -97128477 + L2 LINE L2 3192 3264 -8 180 97 0 0 chr5 105957213 105957244 -97128288 + (A)n Simple_repeat Simple_repeat 1 31 0 804 279 45 0 chr5 105958565 105958787 -97126745 + MIR SINE MIR 21 252 -10 234 0 0 0 chr5 105959228 105959254 -97126278 + (A)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr5 105960244 105960273 -97125259 + AT_rich Low_complexity Low_complexity 1 29 0 683 227 150 11 chr5 105960664 105960937 -97124595 + L1ME4a LINE L1 5575 5885 -236 22 0 0 0 chr5 105962577 105962599 -97122933 + AT_rich Low_complexity Low_complexity 1 22 0 263 160 0 0 chr5 105962630 105962680 -97122852 - L1ME3A LINE L1 -228 5942 5893 276 323 43 38 chr5 105963094 105963280 -97122252 + L2 LINE L2 2312 2498 -816 561 250 42 47 chr5 105963419 105963655 -97121877 - MER112 DNA MER1_type -24 236 2 320 164 9 2 chr5 105963935 105964167 -97121365 + AluJo SINE Alu 1 272 -30 242 307 57 11 chr5 105964376 105964464 -97121068 + L2 LINE L2 3176 3267 -5 419 39 0 0 chr5 105964898 105964949 -97120583 + AluY SINE Alu 244 294 -17 1595 181 29 4 chr5 105965874 105966155 -97119377 + AluJo SINE Alu 1 288 -24 24 32 0 0 chr5 105966155 105966186 -97119346 + AT_rich Low_complexity Low_complexity 1 31 0 196 350 50 67 chr5 105966757 105966877 -97118655 + L2 LINE L2 3153 3270 -2 249 315 14 0 chr5 105967021 105967094 -97118438 + MIR SINE MIR 33 106 -102 23 33 0 0 chr5 105968126 105968156 -97117376 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr5 105969795 105969839 -97115693 + AT_rich Low_complexity Low_complexity 1 44 0 821 120 0 70 chr5 105970571 105970713 -97114819 + FLAM_C SINE Alu 1 132 -1 192 286 0 0 chr5 105972795 105972844 -97112688 - MIR3 SINE MIR -6 202 154 428 296 43 48 chr5 105974893 105975123 -97110409 - MIR SINE MIR -14 248 20 2375 57 20 0 chr5 105975587 105975886 -97109646 + AluY SINE Alu 1 305 -6 379 248 217 19 chr5 105977275 105977436 -97108096 - MIR SINE MIR -18 244 52 21 0 0 0 chr5 105977777 105977798 -97107734 + AT_rich Low_complexity Low_complexity 1 21 0 600 73 0 0 chr5 105978305 105978387 -97107145 + (TA)n Simple_repeat Simple_repeat 1 82 0 2114 103 3 7 chr5 105978521 105978843 -97106689 + AluY SINE Alu 1 321 0 980 282 116 13 chr5 105979092 105979464 -97106068 - L2 LINE L2 -559 2755 2346 3180 97 2 2 chr5 105979464 105979909 -97105623 + L1PA15 LINE L1 5718 6162 -3 952 286 182 7 chr5 105980102 105980535 -97104997 - L2 LINE L2 -964 2350 1842 361 362 0 14 chr5 105980593 105980734 -97104798 + L2 LINE L2 3133 3271 -1 2048 80 24 103 chr5 105981834 105982173 -97103359 - AluYb8 SINE Alu -6 312 1 342 351 58 0 chr5 105982205 105982376 -97103156 + L2 LINE L2 2555 2735 -579 195 42 0 0 chr5 105982945 105982969 -97102563 + (GGAA)n Simple_repeat Simple_repeat 4 27 0 190 256 0 0 chr5 105983854 105983893 -97101639 - L2 LINE L2 -773 2541 2503 23 33 0 0 chr5 105986325 105986355 -97099177 + AT_rich Low_complexity Low_complexity 1 30 0 191 219 24 0 chr5 105987507 105987548 -97097984 + MIR SINE MIR 218 259 -3 210 71 0 0 chr5 105987944 105987972 -97097560 + (TG)n Simple_repeat Simple_repeat 2 29 0 509 296 147 70 chr5 105988726 105989358 -97096174 + L1M2 LINE L1 566 1246 -5603 216 0 0 0 chr5 105989936 105989960 -97095572 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 216 158 0 0 chr5 105991142 105991180 -97094352 + T-rich Low_complexity Low_complexity 1 38 0 555 276 48 65 chr5 105992480 105992817 -97092715 - MER102b DNA MER1_type 0 341 11 186 133 0 0 chr5 105993361 105993391 -97092141 + (TTA)n Simple_repeat Simple_repeat 2 31 0 666 247 26 0 chr5 105994695 105994902 -97090630 + FAM SINE Alu 1 75 0 2727 93 5 8 chr5 105994902 105995278 -97090254 + THE1C LTR MaLR 1 375 0 278 269 150 10 chr5 105995319 105995474 -97090058 - MIR SINE MIR -50 212 42 289 311 48 42 chr5 105996586 105996753 -97088779 - L2 LINE L2 -446 2868 2701 207 388 42 39 chr5 105996992 105997304 -97088228 - L2 LINE L2 -706 2608 2296 2520 224 55 29 chr5 105998986 105999387 -97086145 - L1ME1 LINE L1 -115 6051 5662 1407 181 101 17 chr5 105999387 105999674 -97085858 - AluJo SINE Alu -1 311 1 2520 224 55 29 chr5 105999674 106000322 -97085210 - L1ME1 LINE L1 -504 5662 4980 714 203 78 26 chr5 106000947 106001179 -97084353 - L1ME1 LINE L1 -1162 4984 4741 279 104 0 0 chr5 106001439 106001487 -97084045 + (CA)n Simple_repeat Simple_repeat 1 48 0 629 205 16 8 chr5 106002739 106002866 -97082666 - MER5A DNA MER1_type -6 183 56 198 323 0 31 chr5 106003978 106004043 -97081489 - L3 LINE CR1 -3 1574 1512 526 221 10 0 chr5 106004337 106004441 -97081091 + MIR SINE MIR 38 142 -120 1149 236 64 30 chr5 106004564 106004894 -97080638 - MLT1A1 LTR MaLR -2 363 23 5829 108 14 0 chr5 106005084 106006128 -97079404 - L1PA13 LINE L1 0 6163 5111 287 250 29 29 chr5 106006565 106006705 -97078827 - L1ME4a LINE L1 -27 6094 5955 2033 148 0 0 chr5 106007275 106007558 -97077974 + AluSx SINE Alu 1 286 -26 228 79 26 0 chr5 106007558 106007596 -97077936 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1973 267 88 13 chr5 106007913 106008770 -97076762 - MER45C DNA AcHobo -1 952 1 557 231 210 0 chr5 106008867 106009010 -97076522 - MER5A DNA MER1_type 0 189 17 2278 88 0 3 chr5 106009033 106009330 -97076202 + AluSc SINE Alu 1 296 -13 350 175 50 0 chr5 106009333 106009413 -97076119 - L1MC4 LINE L1 -1 8041 7958 23 33 0 0 chr5 106009533 106009563 -97075969 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 106009751 106009774 -97075758 + (TG)n Simple_repeat Simple_repeat 2 24 0 567 174 0 37 chr5 106009774 106009883 -97075649 - L1MD2 LINE L1 -227 6132 6028 441 250 155 0 chr5 106009931 106010079 -97075453 + MIR SINE MIR 73 243 -19 23 33 0 0 chr5 106010279 106010309 -97075223 + AT_rich Low_complexity Low_complexity 1 30 0 336 228 11 22 chr5 106010477 106010569 -97074963 + L1ME3A LINE L1 5860 5950 -220 267 257 200 40 chr5 106010632 106010807 -97074725 + L1ME3A LINE L1 5962 6164 -6 232 328 0 0 chr5 106011542 106011603 -97073929 + L2 LINE L2 3245 3305 -8 21 36 0 0 chr5 106012059 106012087 -97073445 + AT_rich Low_complexity Low_complexity 1 28 0 576 216 84 18 chr5 106012168 106012335 -97073197 + MER33 DNA MER1_type 1 178 -146 244 186 327 0 chr5 106012353 106012466 -97073066 + MER33 DNA MER1_type 147 296 -28 1842 178 0 6 chr5 106012469 106012783 -97072749 + AluJo SINE Alu 1 312 0 259 277 45 71 chr5 106014607 106014719 -97070813 + MIR3 SINE MIR 47 155 -53 439 263 52 17 chr5 106014867 106015001 -97070531 + MER5B DNA MER1_type 50 176 -2 503 255 33 39 chr5 106015009 106015162 -97070370 + MIR SINE MIR 19 170 -92 1040 181 70 20 chr5 106015218 106015417 -97070115 - MER3 DNA MER1_type 0 209 1 204 97 0 0 chr5 106015806 106015837 -97069695 + (TG)n Simple_repeat Simple_repeat 1 31 0 741 316 4 22 chr5 106016041 106016269 -97069263 + MIR SINE MIR 29 252 -10 21 0 0 0 chr5 106016715 106016736 -97068796 + AT_rich Low_complexity Low_complexity 1 21 0 41 0 0 0 chr5 106017552 106017593 -97067939 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr5 106017882 106017903 -97067629 + AT_rich Low_complexity Low_complexity 1 21 0 872 215 12 0 chr5 106018179 106018342 -97067190 - FRAM SINE Alu -1 165 1 352 226 73 73 chr5 106018356 106018520 -97067012 - L1ME LINE L1 -400 5721 5558 1382 102 94 28 chr5 106018846 106018932 -97066600 + L1MA4A LINE L1 6023 6102 -201 2160 134 0 3 chr5 106018932 106019245 -97066287 - AluSx SINE Alu 0 312 1 1382 102 94 28 chr5 106019245 106019412 -97066120 + L1MA4A LINE L1 6102 6293 -10 367 282 17 81 chr5 106019444 106019618 -97065914 + L1ME1 LINE L1 7 169 -5901 364 225 0 11 chr5 106019655 106019744 -97065788 + L1ME1 LINE L1 4455 4542 -1538 2658 160 26 36 chr5 106019770 106020300 -97065232 + L1MD3 LINE L1 7471 7995 0 312 212 24 0 chr5 106020288 106020373 -97065159 + L1ME1 LINE L1 4548 4634 -1446 * 2916 203 74 57 chr5 106020445 106020816 -97064716 + L1ME1 LINE L1 4656 5019 -1081 873 186 106 10 chr5 106020816 106021015 -97064517 + MER20 DNA MER1_type 1 218 -1 2916 203 74 57 chr5 106021015 106022068 -97063464 + L1ME1 LINE L1 5019 6090 -10 244 235 0 0 chr5 106023262 106023313 -97062219 + MLT1K LTR MaLR 153 203 -385 293 286 77 90 chr5 106023461 106023695 -97061837 + LTR67 LTR ERVL 64 294 -263 668 281 11 0 chr5 106024093 106024278 -97061254 - MER5A DNA MER1_type 0 189 3 256 369 127 13 chr5 106025118 106025275 -97060257 + L2 LINE L2 3003 3177 -95 207 0 0 0 chr5 106025403 106025426 -97060106 + (T)n Simple_repeat Simple_repeat 1 23 0 308 188 0 0 chr5 106025563 106025627 -97059905 - L1MB8 LINE L1 0 6178 6115 5019 130 18 0 chr5 106025708 106026495 -97059037 - L1PB4 LINE L1 -8 6148 5348 2973 209 50 28 chr5 106026522 106026807 -97058725 - L1MB7 LINE L1 -120 6064 5787 1493 210 25 4 chr5 106026807 106027083 -97058449 - AluJo SINE Alu -30 282 1 2973 209 50 28 chr5 106027083 106027922 -97057610 - L1MB7 LINE L1 -397 5787 4906 311 318 136 19 chr5 106028422 106028576 -97056956 + MIR3 SINE MIR 10 181 -27 300 233 33 0 chr5 106028589 106028649 -97056883 - L2 LINE L2 -1 3271 3210 238 319 0 14 chr5 106029640 106029712 -97055820 - LTR67 LTR ERVL -3 554 484 * 685 270 103 70 chr5 106029654 106030083 -97055449 - MLT1K LTR MaLR -19 569 127 1783 160 0 20 chr5 106030395 106030688 -97054844 + AluJo SINE Alu 3 289 -23 2532 54 3 0 chr5 106030699 106030997 -97054535 + AluY SINE Alu 3 301 -10 509 174 20 0 chr5 106031789 106031887 -97053645 + L1MC4 LINE L1 7796 7895 -147 1468 278 102 4 chr5 106032243 106032764 -97052768 + HAL1 LINE L1 1317 1888 -619 245 249 129 40 chr5 106032890 106033091 -97052441 + HAL1 LINE L1 2289 2507 0 431 129 79 50 chr5 106033144 106033245 -97052287 + L1MC3 LINE L1 7682 7785 0 1251 92 55 46 chr5 106033705 106033923 -97051609 + MER30 DNA MER1_type 1 220 -10 22 0 0 0 chr5 106034270 106034292 -97051240 + AT_rich Low_complexity Low_complexity 1 22 0 853 183 0 37 chr5 106034891 106035055 -97050477 + MLT1A2 LTR MaLR 4 161 -213 2876 0 0 3 chr5 106035063 106035406 -97050126 + AluYa5 SINE Alu 1 342 0 1126 171 0 6 chr5 106035433 106035609 -97049923 + MLT1A2 LTR MaLR 189 363 -11 474 348 5 54 chr5 106035972 106036176 -97049356 + MLT1K LTR MaLR 82 275 -313 5812 167 23 6 chr5 106036256 106037750 -97047782 - L1PA16 LINE L1 0 6166 4633 1977 143 0 20 chr5 106037750 106038051 -97047481 - AluSx SINE Alu -17 295 1 5812 167 23 6 chr5 106038051 106038559 -97046973 - L1PA16 LINE L1 -1533 4633 4135 238 318 159 0 chr5 106038559 106038691 -97046841 + MLT1K LTR MaLR 422 574 -14 760 316 36 7 chr5 106038706 106038984 -97046548 + L3 LINE CR1 685 970 -607 345 249 207 16 chr5 106038991 106039184 -97046348 - L1M4 LINE L1 -1331 4815 4586 278 260 50 20 chr5 106039877 106039977 -97045555 + MIR3 SINE MIR 101 203 -5 304 250 176 29 chr5 106040201 106040337 -97045195 + MLT1H LTR MaLR 96 251 -298 21 0 0 0 chr5 106040747 106040768 -97044764 + AT_rich Low_complexity Low_complexity 1 21 0 476 239 65 27 chr5 106040781 106040965 -97044567 - L1MC4a LINE L1 -1901 5907 5717 6794 126 59 8 chr5 106040979 106042121 -97043411 - Tigger3b DNA MER2_type 0 1231 32 182 286 0 54 chr5 106042325 106042381 -97043151 + L2 LINE L2 3037 3089 -183 501 298 38 19 chr5 106042387 106042545 -97042987 - MIR SINE MIR -29 233 73 341 287 66 7 chr5 106042942 106043078 -97042454 - MIR SINE MIR -46 216 73 748 238 12 83 chr5 106043111 106043318 -97042214 - MIR SINE MIR -26 236 49 1279 208 32 55 chr5 106043318 106043722 -97041810 + MLT2C1 LTR ERVL 3 397 0 748 238 12 83 chr5 106043722 106043766 -97041766 - MIR SINE MIR -213 49 3 2446 88 0 0 chr5 106044269 106044575 -97040957 - AluY SINE Alu -5 306 1 21 57 0 0 chr5 106045175 106045210 -97040322 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 106045314 106045339 -97040193 + AT_rich Low_complexity Low_complexity 1 25 0 464 215 169 23 chr5 106047457 106047634 -97037898 - MIR SINE MIR -58 204 2 3193 107 48 42 chr5 106047825 106048348 -97037184 + MER1A DNA MER1_type 2 527 0 21 0 0 0 chr5 106048742 106048763 -97036769 + AT_rich Low_complexity Low_complexity 1 21 0 2375 74 0 3 chr5 106048886 106049183 -97036349 - AluY SINE Alu -15 296 1 1769 196 12 3 chr5 106049324 106049665 -97035867 - MER2 DNA MER2_type 0 344 1 2024 131 19 33 chr5 106050083 106050442 -97035090 - MLT2C1 LTR ERVL 0 397 44 1659 191 16 35 chr5 106052565 106052937 -97032595 - MLT1A1 LTR MaLR 0 365 1 389 293 161 41 chr5 106052963 106053280 -97032252 - L2 LINE L2 -24 3289 2935 1531 177 71 15 chr5 106053392 106053658 -97031874 + AluJb SINE Alu 5 285 -27 1946 257 97 11 chr5 106053798 106054363 -97031169 + Zaphod DNA AcHobo 1 614 -3417 1191 182 149 45 chr5 106054365 106054634 -97030898 + AluJo SINE Alu 2 298 -14 706 180 117 5 chr5 106054651 106054857 -97030675 + Zaphod DNA AcHobo 616 844 -3187 3440 252 51 54 chr5 106054859 106056460 -97029072 + Zaphod DNA AcHobo 974 2569 -1462 201 154 0 26 chr5 106057157 106057196 -97028336 + CT-rich Low_complexity Low_complexity 2 39 0 451 256 76 46 chr5 106060263 106060715 -97024817 - MLT1H LTR MaLR 0 549 21 362 241 173 9 chr5 106061134 106061354 -97024178 - L2 LINE L2 -201 3112 2857 3307 206 72 14 chr5 106063954 106064919 -97020613 + Zaphod DNA AcHobo 3010 4030 -1 612 226 9 0 chr5 106065298 106065413 -97020119 + FLAM_C SINE Alu 7 122 -21 183 80 0 0 chr5 106065761 106065786 -97019746 + (A)n Simple_repeat Simple_repeat 1 25 0 1797 237 160 2 chr5 106066283 106066751 -97018781 - MLT1F LTR MaLR 0 542 1 192 295 147 58 chr5 106066878 106067102 -97018430 + MIR SINE MIR 13 256 -6 6455 131 23 33 chr5 106067326 106068517 -97017015 + L1M2 LINE L1 4112 5307 -984 837 169 0 0 chr5 106068517 106068647 -97016885 + FLAM_A SINE Alu 1 130 -3 6455 131 23 33 chr5 106068647 106068987 -97016545 + L1M2 LINE L1 5307 5649 -642 285 29 0 0 chr5 106068987 106069021 -97016511 + (CA)n Simple_repeat Simple_repeat 1 34 0 2379 149 25 20 chr5 106069057 106069547 -97015985 - L1MA8 LINE L1 -63 6228 5737 419 132 35 0 chr5 106069555 106069669 -97015863 + (TA)n Simple_repeat Simple_repeat 1 118 0 36 53 0 0 chr5 106069673 106069730 -97015802 + AT_rich Low_complexity Low_complexity 1 57 0 258 221 15 0 chr5 106069732 106069800 -97015732 + L1MA8 LINE L1 6217 6285 -6 184 324 42 14 chr5 106069959 106070030 -97015502 + MER5B DNA MER1_type 57 129 -49 258 56 0 0 chr5 106070256 106070292 -97015240 + (TG)n Simple_repeat Simple_repeat 2 37 0 346 245 59 83 chr5 106070559 106070763 -97014769 + L1MC4a LINE L1 5842 6040 -1768 245 239 15 30 chr5 106070968 106071035 -97014497 - L2 LINE L2 -1 3271 3206 551 255 51 108 chr5 106072168 106072638 -97012894 - MLT1F LTR MaLR 0 542 100 3446 171 75 37 chr5 106072651 106072883 -97012649 + L1MC3 LINE L1 6891 7113 -672 14262 82 2 1 chr5 106072883 106075615 -97009917 - L1PA7 LINE L1 -2 6152 3421 3446 171 75 37 chr5 106075615 106076237 -97009295 + L1MC3 LINE L1 7113 7777 -8 281 259 91 115 chr5 106076348 106076862 -97008670 + MLT1K LTR MaLR 76 577 -11 203 277 72 12 chr5 106076994 106077077 -97008455 + MIR SINE MIR 175 262 0 531 307 91 17 chr5 106077181 106077422 -97008110 + MIR SINE MIR 4 262 0 22 80 0 0 chr5 106077543 106077593 -97007939 + AT_rich Low_complexity Low_complexity 1 50 0 481 258 181 69 chr5 106078083 106078432 -97007100 - MLT1L LTR MaLR -223 392 5 1716 220 52 71 chr5 106078634 106078697 -97006835 + L1ME3A LINE L1 5524 5587 -583 1837 165 35 49 chr5 106078697 106079067 -97006465 + MLT1A1 LTR MaLR 1 365 0 1716 220 52 71 chr5 106079067 106079584 -97005948 + L1ME3A LINE L1 5587 6093 -77 2430 93 0 0 chr5 106079584 106079895 -97005637 + AluSq SINE Alu 1 311 -2 1716 220 52 71 chr5 106079895 106079962 -97005570 + L1ME3A LINE L1 6093 6160 -10 306 230 210 0 chr5 106080001 106080101 -97005431 - L2 LINE L2 -3 3310 3190 474 272 184 7 chr5 106080173 106080320 -97005212 - MIR SINE MIR -88 174 2 713 261 69 42 chr5 106080326 106080729 -97004803 - L2 LINE L2 -116 3197 2786 2959 59 0 0 chr5 106081203 106081558 -97003974 - THE1A LTR MaLR 0 355 1 548 319 84 58 chr5 106082139 106082568 -97002964 - L2 LINE L2 0 3272 2833 271 333 0 0 chr5 106082574 106082643 -97002889 - L2 LINE L2 -1 3312 3244 474 323 56 77 chr5 106082670 106083008 -97002524 - L2 LINE L2 -560 2754 2424 181 332 118 70 chr5 106083937 106085086 -97000446 - L2 LINE L2 -714 2600 1398 22 35 0 0 chr5 106085427 106085456 -97000076 + AT_rich Low_complexity Low_complexity 1 29 0 260 268 126 52 chr5 106086254 106086564 -96998968 + L1ME3A LINE L1 5691 6023 -147 28 0 0 0 chr5 106086631 106086659 -96998873 + AT_rich Low_complexity Low_complexity 1 28 0 497 280 140 9 chr5 106086941 106087155 -96998377 - L1MC/D LINE L1 -2144 5664 5423 1075 164 6 0 chr5 106087659 106087836 -96997696 - MER5B DNA MER1_type 0 178 1 842 212 6 12 chr5 106088761 106088931 -96996601 - FAM SINE Alu -6 169 1 218 186 0 23 chr5 106089112 106089155 -96996377 + MIR SINE MIR 112 153 -109 258 272 80 40 chr5 106089367 106089492 -96996040 + MIR SINE MIR 83 212 -50 190 245 20 0 chr5 106089801 106089850 -96995682 - L3 LINE CR1 -568 1009 960 264 279 54 45 chr5 106090895 106091006 -96994526 - MIR3 SINE MIR -15 193 82 1671 175 92 14 chr5 106091441 106091801 -96993731 - MER57A LTR ERV1 -15 388 1 1352 306 142 5 chr5 106091831 106092423 -96993109 - L3 LINE CR1 -167 1410 738 765 318 71 22 chr5 106092625 106093034 -96992498 + LTR16A LTR ERVL 16 444 -6 471 315 70 0 chr5 106093122 106093322 -96992210 + HERV16 LTR ERVL 117 330 -4666 3978 286 52 25 chr5 106093789 106095294 -96990238 + HERV16 LTR ERVL 1675 3247 -2058 1258 201 64 69 chr5 106095294 106095686 -96989846 - MLT1B LTR MaLR 0 390 1 3978 286 52 25 chr5 106095686 106095842 -96989690 + HERV16 LTR ERVL 3247 3397 -1908 479 336 106 25 chr5 106095949 106096158 -96989374 + HERV16 LTR ERVL 3605 3796 -1968 303 28 0 0 chr5 106096158 106096194 -96989338 + (TG)n Simple_repeat Simple_repeat 2 37 0 479 336 106 25 chr5 106096194 106096466 -96989066 + HERV16 LTR ERVL 3796 4125 -1639 809 346 66 9 chr5 106096491 106097451 -96988081 + HERV16 LTR ERVL 4253 5327 -336 1232 266 38 26 chr5 106097648 106098073 -96987459 + LTR16A LTR ERVL 7 436 -14 633 280 115 0 chr5 106098203 106098403 -96987129 - MIR SINE MIR -39 223 1 25 0 0 0 chr5 106099793 106099818 -96985714 + AT_rich Low_complexity Low_complexity 1 25 0 368 258 16 149 chr5 106099834 106100028 -96985504 + L1ME3 LINE L1 5988 6155 -7 26 0 0 0 chr5 106101157 106101183 -96984349 + AT_rich Low_complexity Low_complexity 1 26 0 1743 162 10 34 chr5 106101183 106101480 -96984052 - AluJo SINE Alu -22 290 1 16204 82 7 5 chr5 106202025 106204455 -96881077 - L1P LINE L1 -1441 4705 2271 1561 211 67 16 chr5 106204555 106204930 -96880602 + MLT1F LTR MaLR 149 542 0 393 22 0 0 chr5 106205461 106205507 -96880025 + (TG)n Simple_repeat Simple_repeat 1 46 0 260 205 0 103 chr5 106206070 106206148 -96879384 + MER5B DNA MER1_type 32 101 -77 225 122 24 0 chr5 106206342 106206383 -96879149 - tRNA-Met-e tRNA tRNA -33 42 1 344 186 35 12 chr5 106206492 106206578 -96878954 + MLT1K LTR MaLR 501 588 0 289 177 51 101 chr5 106206707 106206786 -96878746 + MER91C DNA MER1_type 36 110 -30 2200 96 13 3 chr5 106206895 106207196 -96878336 - AluSq SINE Alu -9 304 1 2190 97 0 7 chr5 106207392 106207680 -96877852 - AluSx SINE Alu -26 286 1 521 239 45 49 chr5 106209424 106209671 -96875861 + L1ME4a LINE L1 5874 6119 -2 315 289 0 0 chr5 106212104 106212194 -96873338 + MIR SINE MIR 148 237 -25 2224 102 0 23 chr5 106212578 106212926 -96872606 + AluSq SINE Alu 1 313 0 587 118 44 44 chr5 106213392 106213528 -96872004 - L1MA7 LINE L1 -1 6290 6155 4070 207 25 14 chr5 106213549 106214609 -96870923 - L1 LINE L1 -809 5573 4503 533 160 0 19 chr5 106214609 106214715 -96870817 - MSTA LTR MaLR 0 428 325 1389 156 100 7 chr5 106214833 106215103 -96870429 - MSTA LTR MaLR -133 295 1 8833 146 17 38 chr5 106215105 106216714 -96868818 - MSTA-int LTR MaLR -2 1578 3 1857 159 154 5 chr5 106216716 106217087 -96868445 - MSTA LTR MaLR 0 428 3 486 172 26 17 chr5 106217088 106217204 -96868328 - L1 LINE L1 -1874 4508 4392 * 30001 106 7 25 chr5 106217197 106223639 -96861893 - L1PA7 LINE L1 -3 6466 11 7793 203 35 24 chr5 106223638 106225978 -96859554 - L1 LINE L1 -1969 4413 2043 * 844 217 26 0 chr5 106226563 106226752 -96858780 - MER105 DNA DNA -10 194 1 1851 240 42 31 chr5 106227228 106227777 -96857755 + MLT1H1 LTR MaLR 1 555 0 2163 121 0 40 chr5 106228806 106229129 -96856403 + AluSx SINE Alu 1 310 -2 932 208 22 53 chr5 106230483 106230568 -96854964 - MIR SINE MIR -21 241 155 2573 144 41 5 chr5 106230568 106230979 -96854553 - MSTB LTR MaLR 0 426 1 932 208 22 53 chr5 106230979 106231119 -96854413 - MIR SINE MIR -107 155 23 887 152 4 140 chr5 106232752 106232995 -96852537 - MER20 DNA MER1_type -8 211 2 584 301 85 7 chr5 106233207 106233360 -96852172 - MIR3 SINE MIR -27 181 17 497 284 35 24 chr5 106235346 106235515 -96850017 - MIR3 SINE MIR -17 191 21 1775 181 4 0 chr5 106236535 106236836 -96848696 + AluSx SINE Alu 2 303 0 573 72 21 21 chr5 106236971 106237068 -96848464 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 1986 168 0 0 chr5 106237082 106237391 -96848141 - AluJb SINE Alu -3 309 1 558 333 39 99 chr5 106237903 106238396 -96847136 + L2 LINE L2 2808 3270 -2 808 293 16 23 chr5 106238646 106238902 -96846630 + MIR SINE MIR 8 261 -1 571 235 59 0 chr5 106239004 106239157 -96846375 - MER105 DNA DNA -17 187 26 183 146 73 55 chr5 106239453 106239508 -96846024 + L2 LINE L2 2167 2222 -1092 531 69 0 0 chr5 106239971 106240043 -96845489 + (TC)n Simple_repeat Simple_repeat 1 72 0 292 82 82 0 chr5 106241757 106241806 -96843726 + MER116 DNA Mariner 5 57 -23 225 98 171 0 chr5 106241829 106241870 -96843662 + MER116 DNA Mariner 33 80 0 186 255 0 0 chr5 106242602 106242653 -96842879 - MIR3 SINE MIR -9 199 149 275 189 57 29 chr5 106242780 106242864 -96842668 - MIR3 SINE MIR -52 156 76 29 60 0 0 chr5 106244027 106244077 -96841455 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr5 106244101 106244125 -96841407 + AT_rich Low_complexity Low_complexity 1 24 0 194 208 125 42 chr5 106245414 106245486 -96840046 + MIR SINE MIR 64 141 -67 22 0 0 0 chr5 106245580 106245602 -96839930 + AT_rich Low_complexity Low_complexity 1 22 0 185 219 110 41 chr5 106245613 106245686 -96839846 + L2 LINE L2 1337 1414 -1900 976 329 127 31 chr5 106246675 106247853 -96837679 + L2 LINE L2 1615 2904 -410 209 261 0 0 chr5 106248401 106248447 -96837085 + MIR SINE MIR 32 77 -131 582 264 121 22 chr5 106253169 106253533 -96831999 + MER113 DNA MER1_type? 48 447 -74 780 222 27 5 chr5 106253935 106254120 -96831412 - MER5A DNA MER1_type 0 189 1 943 223 175 9 chr5 106254349 106254681 -96830851 + HsTC2 DNA Tc2 1 387 -1511 386 224 88 6 chr5 106254683 106254853 -96830679 + Charlie2 DNA MER1_type 2675 2858 -4 711 258 19 4 chr5 106255105 106255421 -96830111 + HsTC2 DNA Tc2 374 1896 -2 258 309 224 19 chr5 106255423 106255633 -96829899 + L2 LINE L2 3061 3313 0 1181 245 142 32 chr5 106257629 106258066 -96827466 - MLT1E LTR MaLR -107 486 2 682 351 63 27 chr5 106258071 106258481 -96827051 - L2 LINE L2 -688 2626 2202 720 353 94 18 chr5 106258525 106259485 -96826047 - HERVL LTR ERVL -850 4804 3808 570 270 112 65 chr5 106260059 106260721 -96824811 - L2 LINE L2 -1305 2009 1317 366 332 93 28 chr5 106260846 106261093 -96824439 - L2 LINE L2 -2856 458 196 189 0 0 0 chr5 106261171 106261192 -96824340 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 106261372 106261393 -96824139 + AT_rich Low_complexity Low_complexity 1 21 0 2532 133 123 92 chr5 106262092 106262736 -96822796 - MER4A LTR ERV1 0 664 1 883 268 49 31 chr5 106263303 106263628 -96821904 + MLT1I LTR MaLR 67 397 -12 1913 133 191 8 chr5 106264718 106265080 -96820452 + MSTA LTR MaLR 1 428 0 1407 267 44 35 chr5 106265296 106265443 -96820089 + L2 LINE L2 2233 2377 -937 2534 190 11 65 chr5 106265443 106265986 -96819546 + MLT2B2 LTR ERVL 1 514 -1 1407 267 44 35 chr5 106265986 106266318 -96819214 + L2 LINE L2 2377 2716 -598 305 219 116 52 chr5 106266334 106266489 -96819043 - HAL1 LINE L1 -13 2494 2330 481 196 18 36 chr5 106266515 106266627 -96818905 - MER104 DNA Tc2 -70 110 1 360 220 63 6 chr5 106266647 106266806 -96818726 + (TA)n Simple_repeat Simple_repeat 2 169 0 207 0 0 0 chr5 106266874 106266897 -96818635 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr5 106266914 106266943 -96818589 + AT_rich Low_complexity Low_complexity 1 29 0 29482 115 9 57 chr5 106267051 106267741 -96817791 - L1PA8 LINE L1 -2 6170 5449 2167 119 0 0 chr5 106267741 106268035 -96817497 - AluSc SINE Alu -15 294 1 29482 115 9 57 chr5 106268035 106273823 -96811709 - L1PA8 LINE L1 -723 5449 12 39874 62 3 1 chr5 106273876 106280014 -96805518 - L1PA5 LINE L1 -2 6152 1 810 263 179 51 chr5 106280063 106280259 -96805273 - HAL1 LINE L1 -330 2177 2008 2284 111 0 3 chr5 106280259 106280565 -96804967 + AluSq SINE Alu 1 305 -8 810 263 179 51 chr5 106280565 106281060 -96804472 - HAL1 LINE L1 -499 2008 1397 31 88 0 0 chr5 106281168 106281248 -96804284 + AT_rich Low_complexity Low_complexity 1 80 0 797 287 87 36 chr5 106281337 106281808 -96803724 - HAL1 LINE L1 -1509 998 504 575 268 52 5 chr5 106281816 106282010 -96803522 + L2 LINE L2 3098 3300 -13 40 21 0 0 chr5 106282166 106282213 -96803319 + AT_rich Low_complexity Low_complexity 1 47 0 190 268 0 155 chr5 106282215 106282312 -96803220 - MIR SINE MIR -73 135 54 210 273 172 30 chr5 106282317 106282416 -96803116 - L2 LINE L2 -36 3277 3165 343 310 57 70 chr5 106283607 106283765 -96801767 + L2 LINE L2 3116 3271 -1 311 282 218 11 chr5 106284046 106284220 -96801312 - MIR SINE MIR -6 256 47 1358 150 0 9 chr5 106285776 106285989 -96799543 - AluJo SINE Alu -1 311 101 354 330 72 55 chr5 106286616 106287146 -96798386 + LTR67 LTR ERVL 12 550 -7 180 0 0 0 chr5 106287458 106287478 -96798054 + (TG)n Simple_repeat Simple_repeat 2 21 0 491 250 10 115 chr5 106287532 106287587 -96797945 - L1ME4a LINE L1 -30 6091 6032 2017 169 15 13 chr5 106287587 106287941 -96797591 + MLT2C1 LTR ERVL 1 358 -39 366 85 0 0 chr5 106287941 106288000 -96797532 + (TA)n Simple_repeat Simple_repeat 1 59 0 2017 169 15 13 chr5 106288000 106288041 -96797491 + MLT2C1 LTR ERVL 358 397 0 491 250 10 115 chr5 106288041 106288101 -96797431 - L1ME4a LINE L1 -89 6032 5967 213 39 0 0 chr5 106288101 106288127 -96797405 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 491 250 10 115 chr5 106288127 106288172 -96797360 - L1ME4a LINE L1 -154 5967 5919 6240 141 26 61 chr5 106288172 106288473 -96797059 + Tigger3b DNA MER2_type 1 311 -2717 2075 153 3 0 chr5 106288473 106288781 -96796751 - AluSx SINE Alu -3 309 1 6240 141 26 61 chr5 106288781 106289755 -96795777 + Tigger3b DNA MER2_type 311 1231 0 491 250 10 115 chr5 106289755 106289904 -96795628 - L1ME4a LINE L1 -202 5919 5813 3172 140 11 56 chr5 106289904 106290547 -96794985 + L1MA9 LINE L1 5698 6311 -1 327 272 88 0 chr5 106290684 106290820 -96794712 - L1ME4a LINE L1 -478 5643 5496 325 319 58 37 chr5 106290901 106291089 -96794443 - L1ME4a LINE L1 -177 5944 5753 235 247 67 0 chr5 106291102 106291191 -96794341 - L1ME4a LINE L1 -439 5682 5588 5392 197 74 13 chr5 106292101 106293472 -96792060 + Charlie1a DNA MER1_type 1 1454 -1 381 292 36 54 chr5 106294304 106294472 -96791060 + MIR SINE MIR 65 229 -33 330 273 11 11 chr5 106294559 106294647 -96790885 - L2 LINE L2 0 3313 3226 221 320 0 90 chr5 106294650 106294750 -96790782 + L2 LINE L2 3205 3295 -18 479 277 0 0 chr5 106294760 106294872 -96790660 - MIR SINE MIR -88 174 63 367 319 159 66 chr5 106295008 106295488 -96790044 - L2 LINE L2 -10 3262 2700 2088 99 3 7 chr5 106295488 106295771 -96789761 - AluSc SINE Alu -10 299 18 367 319 159 66 chr5 106295771 106296014 -96789518 - L2 LINE L2 -572 2700 2481 185 333 29 0 chr5 106296229 106296298 -96789234 + L3 LINE CR1 1502 1572 -5 298 250 15 0 chr5 106296412 106296480 -96789052 + MER94 DNA DNA 66 134 0 313 269 79 4 chr5 106297444 106297562 -96787970 + MIR SINE MIR 5 141 -67 536 255 21 94 chr5 106297955 106298147 -96787385 + MIR SINE MIR 23 200 -62 556 271 56 90 chr5 106298674 106298725 -96786807 - MIR SINE MIR 0 262 211 2185 127 3 0 chr5 106298725 106299033 -96786499 + AluSq SINE Alu 2 310 -3 556 271 56 90 chr5 106299033 106299247 -96786285 - MIR SINE MIR -51 211 6 1933 186 27 25 chr5 106300936 106301424 -96784108 + L1MA9 LINE L1 5782 6270 -42 189 107 0 0 chr5 106301424 106301452 -96784080 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1864 163 10 0 chr5 106301700 106301995 -96783537 + AluJb SINE Alu 1 298 -14 351 263 285 0 chr5 106303764 106303943 -96781589 - Charlie8 DNA MER1_type -2187 230 1 292 319 114 6 chr5 106305560 106305726 -96779806 + MIR SINE MIR 35 218 -44 216 283 19 0 chr5 106306234 106306287 -96779245 - L2 LINE L2 -31 3282 3229 190 262 78 58 chr5 106306478 106306581 -96778951 + MIR SINE MIR 112 216 -46 2841 78 3 0 chr5 106307473 106307843 -96777689 + L1PA7 LINE L1 5777 6147 -7 183 292 124 11 chr5 106308126 106308215 -96777317 - L3b LINE CR1 -95 1488 1390 2293 100 0 3 chr5 106308325 106308624 -96776908 + AluSx SINE Alu 1 298 -14 206 206 0 0 chr5 106309683 106309717 -96775815 + L2 LINE L2 3203 3236 -36 42 82 0 0 chr5 106309940 106310038 -96775494 + AT_rich Low_complexity Low_complexity 1 98 0 233 169 258 81 chr5 106311642 106311766 -96773766 + MER104 DNA Tc2 1 146 -34 193 279 135 58 chr5 106312748 106312852 -96772680 - L2 LINE L2 -10 3262 3151 2656 45 0 0 chr5 106312852 106313162 -96772370 + AluY SINE Alu 1 310 -1 562 251 45 86 chr5 106313645 106313912 -96771620 + L2 LINE L2 3041 3296 -17 1984 207 146 18 chr5 106314230 106314840 -96770692 + MER76 LTR ERV 1 688 0 1432 61 0 0 chr5 106315311 106315492 -96770040 - L1PA5 LINE L1 0 6154 5974 197 308 58 0 chr5 106315747 106315799 -96769733 - L3 LINE CR1 -9 1568 1514 261 330 10 94 chr5 106316281 106316484 -96769048 + MER5A DNA MER1_type 4 189 0 * 265 287 11 127 chr5 106316312 106316493 -96769039 - MER5A DNA MER1_type -23 166 7 486 305 102 25 chr5 106316753 106316989 -96768543 + MIR SINE MIR 9 262 0 1139 156 0 0 chr5 106317565 106317738 -96767794 + AluSg/x SINE Alu 131 303 -9 520 230 53 9 chr5 106318208 106318321 -96767211 - MIR3 SINE MIR -49 159 42 311 346 84 28 chr5 106319013 106319299 -96766233 + L1ME LINE L1 4914 5215 -931 791 263 48 24 chr5 106319344 106319701 -96765831 + L1ME LINE L1 5329 5701 -420 246 202 242 20 chr5 106320984 106321083 -96764449 + MIR SINE MIR 48 168 -94 949 159 0 0 chr5 106323849 106324000 -96761532 - AluSx SINE Alu -6 304 154 458 159 148 0 chr5 106324061 106324149 -96761383 - AluSx SINE Alu -168 145 45 207 0 0 0 chr5 106324798 106324821 -96760711 + (T)n Simple_repeat Simple_repeat 1 23 0 2227 117 0 3 chr5 106325563 106325863 -96759669 + AluSx SINE Alu 1 299 -13 2423 47 0 66 chr5 106325882 106326201 -96759331 + AluY SINE Alu 1 298 -13 576 170 20 0 chr5 106326201 106326301 -96759231 + MIR SINE MIR 59 160 -102 840 272 36 0 chr5 106326320 106326544 -96758988 - MIR SINE MIR -29 233 2 244 289 165 10 chr5 106326666 106326763 -96758769 + MIR3 SINE MIR 43 154 -54 685 270 249 8 chr5 106327182 106327575 -96757957 + LTR33 LTR ERVL 12 499 -22 375 297 0 11 chr5 106328328 106328419 -96757113 + MIR SINE MIR 16 105 -157 283 254 0 0 chr5 106328448 106328511 -96757021 + MIR SINE MIR 197 259 -3 400 255 80 45 chr5 106329621 106329821 -96755711 + MLT1K LTR MaLR 375 581 -7 183 80 0 0 chr5 106331011 106331036 -96754496 + (CAT)n Simple_repeat Simple_repeat 2 26 0 181 95 24 24 chr5 106331332 106331374 -96754158 + (TA)n Simple_repeat Simple_repeat 1 42 0 28 48 0 0 chr5 106331405 106331447 -96754085 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr5 106331459 106331493 -96754039 + (TC)n Simple_repeat Simple_repeat 2 35 0 611 254 105 6 chr5 106331494 106331675 -96753857 - MIR SINE MIR -58 204 6 35 24 0 0 chr5 106331811 106331853 -96753679 + AT_rich Low_complexity Low_complexity 1 42 0 261 292 30 65 chr5 106332160 106332328 -96753204 - MIR SINE MIR -38 224 63 468 153 0 0 chr5 106332782 106332867 -96752665 + GA-rich Low_complexity Low_complexity 2 86 0 207 0 0 0 chr5 106334041 106334064 -96751468 + (A)n Simple_repeat Simple_repeat 1 23 0 605 256 32 0 chr5 106334257 106334382 -96751150 - MIR3 SINE MIR -11 197 69 605 313 78 5 chr5 106336449 106336666 -96748866 + MIR SINE MIR 12 244 -18 2157 114 0 0 chr5 106336724 106337005 -96748527 + AluSq SINE Alu 1 281 -32 739 29 20 10 chr5 106337006 106337108 -96748424 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 214 244 89 0 chr5 106339458 106339503 -96746029 - L3 LINE CR1 -24 1553 1505 200 274 0 0 chr5 106340841 106340892 -96744640 + L2 LINE L2 3263 3313 0 22 70 0 0 chr5 106340971 106341014 -96744518 + AT_rich Low_complexity Low_complexity 1 43 0 2127 108 9 12 chr5 106341478 106341802 -96743730 - L1PA13 LINE L1 0 6163 5841 201 108 0 0 chr5 106346635 106346672 -96738860 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 644 211 161 6 chr5 106349641 106349802 -96735730 + MER5A DNA MER1_type 4 189 0 813 296 103 26 chr5 106349858 106350206 -96735326 - L3 LINE CR1 -132 1445 1071 1915 221 58 22 chr5 106350245 106350797 -96734735 - L1MC4a LINE L1 0 7808 7237 1060 298 69 11 chr5 106351228 106351665 -96733867 + HAL1 LINE L1 2 463 -2044 252 282 24 48 chr5 106352024 106352148 -96733384 + Charlie8 DNA MER1_type 53 173 -2244 236 250 0 0 chr5 106352295 106352351 -96733181 + Charlie8 DNA MER1_type 2344 2399 -18 589 263 149 10 chr5 106352970 106353164 -96732368 + MIR SINE MIR 19 239 -23 225 346 67 10 chr5 106354053 106354157 -96731375 - MIR SINE MIR -106 156 47 475 286 180 0 chr5 106354227 106354405 -96731127 + MIR SINE MIR 53 262 0 191 258 90 56 chr5 106354674 106354763 -96730769 - MER5A DNA MER1_type -48 141 50 186 43 0 0 chr5 106354822 106354845 -96730687 + (CTG)n Simple_repeat Simple_repeat 2 24 0 448 269 19 12 chr5 106354850 106355010 -96730522 + CT-rich Low_complexity Low_complexity 2 162 0 338 224 122 10 chr5 106355641 106355739 -96729793 - MER5B DNA MER1_type 0 178 70 702 293 89 71 chr5 106356623 106357217 -96728315 - HAL1 LINE L1 -1412 1095 491 501 181 0 11 chr5 106357323 106357417 -96728115 + FRAM SINE Alu 7 99 -77 1511 179 3 36 chr5 106357888 106358190 -96727342 - AluJb SINE Alu -20 292 1 213 182 0 0 chr5 106359484 106359539 -96725993 + (CA)n Simple_repeat Simple_repeat 1 55 0 267 31 0 0 chr5 106360438 106360470 -96725062 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 223 317 0 0 chr5 106360470 106360530 -96725002 - L2 LINE L2 -13 3300 3241 339 228 93 47 chr5 106360969 106361162 -96724370 - HAL1 LINE L1 -23 2484 2283 1013 172 14 29 chr5 106361278 106361569 -96723963 + MER1B DNA MER1_type 1 339 0 1542 256 123 22 chr5 106361569 106362033 -96723499 - HAL1 LINE L1 -358 2149 1733 3073 130 24 64 chr5 106362033 106362624 -96722908 + L1PB4 LINE L1 5585 6151 -5 1542 256 123 22 chr5 106362624 106362923 -96722609 - HAL1 LINE L1 -774 1733 1306 286 227 14 149 chr5 106363186 106363327 -96722205 + L2 LINE L2 3151 3272 0 6987 57 4 2 chr5 106363392 106364683 -96720849 + L1PA7 LINE L1 4862 6154 0 2821 28 0 0 chr5 106364698 106365016 -96720516 + AluYb8 SINE Alu 1 318 0 444 306 106 0 chr5 106366248 106366428 -96719104 - MIR SINE MIR -62 200 2 1043 217 204 11 chr5 106366752 106367134 -96718398 - MER113 DNA MER1_type? -23 498 43 264 330 167 24 chr5 106367692 106367986 -96717546 + L2 LINE L2 2929 3264 -49 505 279 38 6 chr5 106368169 106368352 -96717180 - Charlie8 DNA MER1_type -2183 234 46 243 319 159 9 chr5 106368638 106368751 -96716781 - L2 LINE L2 0 3272 3143 2659 92 16 3 chr5 106368764 106369133 -96716399 + THE1C LTR MaLR 1 374 -1 1051 322 69 22 chr5 106369180 106369674 -96715858 + L2 LINE L2 2461 2977 -337 1622 216 9 0 chr5 106370101 106370421 -96715111 + MER58B DNA MER1_type 1 323 -18 1555 69 9 9 chr5 106372380 106372596 -96712936 + L1PA8 LINE L1 5955 6170 -2 3160 175 50 20 chr5 106372892 106373599 -96711933 - L1MB7 LINE L1 0 6184 5457 24 32 0 0 chr5 106373723 106373754 -96711778 + AT_rich Low_complexity Low_complexity 1 31 0 274 216 0 0 chr5 106373960 106374011 -96711521 - L1M4 LINE L1 -671 5507 5457 24 32 0 0 chr5 106374134 106374165 -96711367 + AT_rich Low_complexity Low_complexity 1 31 0 314 319 7 28 chr5 106374645 106374786 -96710746 + L2 LINE L2 3160 3297 -16 331 236 106 57 chr5 106374901 106375024 -96710508 + MIR SINE MIR 134 262 0 1882 151 46 32 chr5 106375141 106375511 -96710021 + THE1C LTR MaLR 1 375 0 1340 266 45 58 chr5 106377251 106377976 -96707556 - L1M4 LINE L1 -1369 4777 4063 625 197 0 0 chr5 106377976 106378108 -96707424 - L1MA4 LINE L1 -2 6298 6167 1340 266 45 58 chr5 106378108 106378242 -96707290 - L1M4 LINE L1 -2083 4063 3929 3635 245 66 59 chr5 106378244 106380055 -96705477 - L1MC4a LINE L1 -743 5403 4867 4072 132 23 21 chr5 106380140 106380839 -96704693 + L1PB3 LINE L1 5448 6147 -7 233 146 21 0 chr5 106382240 106382288 -96703244 + GA-rich Low_complexity Low_complexity 2 50 0 226 132 0 103 chr5 106382290 106382358 -96703174 - LTR66 LTR ERVL -156 454 394 210 71 0 0 chr5 106382648 106382676 -96702856 + (CA)n Simple_repeat Simple_repeat 1 28 0 507 17 0 0 chr5 106384225 106384285 -96701247 + (TG)n Simple_repeat Simple_repeat 1 60 0 359 264 11 0 chr5 106384762 106384849 -96700683 - MER117 DNA MER1_type -1 196 109 440 202 10 50 chr5 106384893 106384992 -96700540 + L2 LINE L2 3218 3312 -1 1257 215 95 31 chr5 106385303 106385693 -96699839 - MLT1C LTR MaLR -36 431 17 213 370 25 12 chr5 106385699 106385780 -96699752 - L2 LINE L2 -91 3181 3100 540 285 47 78 chr5 106385922 106386346 -96699186 - MLT1J LTR MaLR -100 411 1 212 323 123 28 chr5 106386363 106386583 -96698949 - L2 LINE L2 -241 3031 2791 541 288 145 58 chr5 106386585 106387089 -96698443 - LTR67 LTR ERVL 0 557 10 21 0 0 0 chr5 106389414 106389435 -96696097 + AT_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr5 106389554 106389601 -96695931 + (CA)n Simple_repeat Simple_repeat 2 48 0 183 156 0 0 chr5 106389783 106389815 -96695717 + (CA)n Simple_repeat Simple_repeat 1 32 0 308 224 147 17 chr5 106391884 106391937 -96693595 - L2 LINE L2 0 3313 3268 2085 128 0 0 chr5 106391937 106392235 -96693297 - AluSc SINE Alu -11 298 1 308 224 147 17 chr5 106392235 106392297 -96693235 - L2 LINE L2 -45 3268 3183 648 327 168 30 chr5 106392332 106393453 -96692079 - L2 LINE L2 -252 3020 1726 235 178 22 0 chr5 106395396 106395441 -96690091 - L3 LINE CR1 -403 1174 1129 197 337 45 22 chr5 106395837 106395926 -96689606 + L2 LINE L2 3178 3268 -4 231 287 96 32 chr5 106396316 106396410 -96689122 - MIR SINE MIR -142 120 21 22 56 0 0 chr5 106397918 106397954 -96687578 + AT_rich Low_complexity Low_complexity 1 36 0 393 294 38 25 chr5 106399500 106399660 -96685872 + MER20B DNA MER1_type 3 164 -619 256 287 58 0 chr5 106401842 106401929 -96683603 + MER91C DNA MER1_type 1 92 -48 2207 254 99 38 chr5 106402776 106402829 -96682703 + L1ME3A LINE L1 4568 4616 -1554 345 82 0 0 chr5 106402829 106402878 -96682654 + (TG)n Simple_repeat Simple_repeat 2 50 0 2207 254 99 38 chr5 106402878 106403696 -96681836 + L1ME3A LINE L1 4616 5570 -600 2637 31 0 19 chr5 106403696 106404013 -96681519 + AluY SINE Alu 1 311 0 2207 254 99 38 chr5 106404013 106404627 -96680905 + L1ME3A LINE L1 5570 6145 -25 1884 137 18 0 chr5 106406249 106406562 -96678970 + AluSx SINE Alu 1 318 0 2184 75 7 29 chr5 106407328 106407634 -96677898 + AluY SINE Alu 1 299 -12 3932 60 2 0 chr5 106407747 106408249 -96677283 - L1PA8 LINE L1 -3 6169 5667 227 170 11 75 chr5 106408654 106408748 -96676784 + T-rich Low_complexity Low_complexity 4 91 0 216 221 250 0 chr5 106409169 106409237 -96676295 - MIR SINE MIR -87 175 91 7479 33 0 0 chr5 106409357 106410961 -96674571 - L1PA4 LINE L1 -4 6151 4548 268 257 71 0 chr5 106411451 106411521 -96674011 + LTR16A LTR ERVL 326 400 -50 252 86 0 0 chr5 106411523 106411558 -96673974 + (A)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 106411593 106411616 -96673916 + AT_rich Low_complexity Low_complexity 1 23 0 3217 129 28 6 chr5 106411756 106412284 -96673248 - Tigger1 DNA MER2_type -3 2415 1876 * 3444 124 45 18 chr5 106412263 106412835 -96672697 - Tigger1 DNA MER2_type -1830 588 1 600 288 90 28 chr5 106412991 106413279 -96672253 - MLT1L LTR MaLR -143 472 167 338 272 34 27 chr5 106413878 106414025 -96671507 + L1M4 LINE L1 2295 2442 -3704 998 192 227 18 chr5 106414243 106414529 -96671003 + MER7A DNA MER2_type 2 345 -1 50 71 0 0 chr5 106414900 106414999 -96670533 + AT_rich Low_complexity Low_complexity 1 99 0 468 0 0 0 chr5 106415108 106415160 -96670372 + (TTTC)n Simple_repeat Simple_repeat 3 54 0 367 280 80 22 chr5 106415553 106415778 -96669754 - L1MC/D LINE L1 -2256 5552 5315 1771 248 55 14 chr5 106417111 106417676 -96667856 - L1ME1 LINE L1 -5 6161 5574 1310 86 6 0 chr5 106417824 106417998 -96667534 + AluSg/x SINE Alu 132 306 -4 364 259 134 0 chr5 106418621 106418733 -96666799 + L2 LINE L2 3186 3312 -1 2087 214 45 38 chr5 106418817 106419396 -96666136 - MER76 LTR ERV -25 663 81 252 306 60 67 chr5 106419450 106419734 -96665798 - L2 LINE L2 -81 3232 2951 378 0 0 0 chr5 106420484 106420526 -96665006 + (TTA)n Simple_repeat Simple_repeat 2 43 0 789 176 0 0 chr5 106420527 106420652 -96664880 - FLAM_C SINE Alu -16 127 3 390 278 111 11 chr5 106420708 106420888 -96664644 + MIR SINE MIR 20 217 -45 584 298 38 43 chr5 106421304 106421539 -96663993 + MIR SINE MIR 6 239 -23 494 276 80 23 chr5 106423043 106423431 -96662101 + L1MC5 LINE L1 7498 7907 -54 2393 69 3 0 chr5 106423640 106423931 -96661601 - AluSc SINE Alu -13 296 5 595 303 16 21 chr5 106424454 106424642 -96660890 + L2 LINE L2 3126 3312 -1 272 307 26 35 chr5 106424757 106424871 -96660661 - MER5A DNA MER1_type -28 161 49 190 204 23 0 chr5 106424955 106424999 -96660533 + L2 LINE L2 3269 3313 0 212 302 135 8 chr5 106425609 106425735 -96659797 + MIR3 SINE MIR 67 208 0 497 259 103 22 chr5 106425735 106425959 -96659573 - L2 LINE L2 -37 3276 3035 289 203 40 27 chr5 106426156 106426230 -96659302 - Charlie8 DNA MER1_type -2237 180 106 1907 205 30 22 chr5 106426246 106426705 -96658827 - MLT1C LTR MaLR -2 465 3 280 217 98 33 chr5 106426838 106426930 -96658602 + L2 LINE L2 3194 3291 -22 183 80 0 0 chr5 106426935 106426960 -96658572 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1763 154 3 21 chr5 106427220 106427544 -96657988 - AluSx SINE Alu 0 319 1 536 272 75 6 chr5 106428080 106428253 -96657279 + LTR33A LTR ERVL 4 188 -335 184 325 50 0 chr5 106429356 106429436 -96656096 - MIR3 SINE MIR -6 202 119 274 310 11 0 chr5 106429472 106429559 -96655973 - MER81 DNA DNA 0 114 27 818 298 16 27 chr5 106430336 106430594 -96654938 - MIR SINE MIR 0 262 8 1916 248 113 24 chr5 106431144 106431293 -96654239 + L1ME3A LINE L1 5317 5451 -719 2669 28 0 19 chr5 106431293 106431610 -96653922 + AluY SINE Alu 1 311 0 1916 248 113 24 chr5 106431610 106432221 -96653311 + L1ME3A LINE L1 5451 6145 -25 1889 140 18 0 chr5 106433843 106434156 -96651376 + AluSx SINE Alu 1 318 0 2262 72 7 26 chr5 106434922 106435226 -96650306 + AluY SINE Alu 1 298 -13 3960 58 2 0 chr5 106435339 106435841 -96649691 - L1PA8 LINE L1 -3 6169 5667 227 170 11 75 chr5 106436246 106436340 -96649192 + T-rich Low_complexity Low_complexity 4 91 0 216 221 250 0 chr5 106436761 106436829 -96648703 - MIR SINE MIR -87 175 91 7452 35 0 0 chr5 106436949 106438553 -96646979 - L1PA4 LINE L1 -4 6151 4548 245 257 71 0 chr5 106439043 106439113 -96646419 + LTR16A LTR ERVL 326 400 -50 252 86 0 0 chr5 106439115 106439150 -96646382 + (A)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 106439185 106439208 -96646324 + AT_rich Low_complexity Low_complexity 1 23 0 3040 129 28 6 chr5 106439348 106439876 -96645656 - Tigger1 DNA MER2_type -3 2415 1876 * 3225 126 45 18 chr5 106439855 106440427 -96645105 - Tigger1 DNA MER2_type -1830 588 1 489 292 90 28 chr5 106440583 106440871 -96644661 - MLT1L LTR MaLR -143 472 167 303 272 34 27 chr5 106441470 106441617 -96643915 + L1M4 LINE L1 2295 2442 -3704 995 189 227 18 chr5 106441835 106442121 -96643411 + MER7A DNA MER2_type 2 345 -1 50 71 0 0 chr5 106442492 106442591 -96642941 + AT_rich Low_complexity Low_complexity 1 99 0 324 0 0 0 chr5 106442700 106442736 -96642796 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 367 280 80 22 chr5 106443129 106443354 -96642178 - L1MC/D LINE L1 -2256 5552 5315 1763 248 63 14 chr5 106444687 106445260 -96640272 - L1ME1 LINE L1 -5 6161 5561 1310 86 6 0 chr5 106445400 106445574 -96639958 + AluSg/x SINE Alu 134 308 -4 364 259 134 0 chr5 106446197 106446309 -96639223 + L2 LINE L2 3186 3312 -1 2070 211 50 42 chr5 106446393 106446971 -96638561 - MER76 LTR ERV -25 663 81 252 306 60 67 chr5 106447025 106447309 -96638223 - L2 LINE L2 -81 3232 2951 243 0 0 0 chr5 106448059 106448086 -96637446 + (TTA)n Simple_repeat Simple_repeat 2 28 0 775 184 0 0 chr5 106448087 106448212 -96637320 - FLAM_C SINE Alu -16 127 3 390 278 111 11 chr5 106448268 106448448 -96637084 + MIR SINE MIR 20 217 -45 584 298 38 43 chr5 106448864 106449099 -96636433 + MIR SINE MIR 6 239 -23 17645 36 8 3 chr5 106449716 106452641 -96632891 + L1PA4 LINE L1 3223 6155 0 2387 82 9 0 chr5 106452662 106452993 -96632539 + L1PA7 LINE L1 5815 6148 -6 242 200 14 0 chr5 106453017 106453061 -96632471 + (TA)n Simple_repeat Simple_repeat 1 48 -23 2786 13 0 0 chr5 106453061 106453366 -96632166 - AluY SINE Alu -6 305 1 242 200 14 0 chr5 106453366 106453391 -96632141 + (TA)n Simple_repeat Simple_repeat 48 71 0 180 0 0 0 chr5 106453462 106453482 -96632050 + (CA)n Simple_repeat Simple_repeat 1 20 0 1247 266 37 30 chr5 106453563 106454130 -96631402 + L1MC4a LINE L1 5293 5863 -1945 1319 213 42 64 chr5 106454135 106454661 -96630871 + MER39 LTR ERV1 15 707 0 1894 139 36 0 chr5 106455909 106456189 -96629343 + AluJb SINE Alu 1 290 -22 30 27 0 0 chr5 106456301 106456338 -96629194 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr5 106456350 106456378 -96629154 + (TG)n Simple_repeat Simple_repeat 2 29 0 664 161 18 42 chr5 106456525 106456693 -96628839 + L1MA6 LINE L1 6137 6300 0 24 32 0 0 chr5 106458056 106458087 -96627445 + AT_rich Low_complexity Low_complexity 1 31 0 188 65 0 32 chr5 106458173 106458204 -96627328 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2377 110 0 0 chr5 106459555 106459864 -96625668 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr5 106460659 106460683 -96624849 + AT_rich Low_complexity Low_complexity 1 24 0 272 362 72 22 chr5 106461394 106461532 -96624000 + L2 LINE L2 3124 3268 -4 615 252 144 64 chr5 106462911 106463224 -96622308 + L2 LINE L2 2976 3313 0 458 281 38 46 chr5 106463257 106463477 -96622055 - MIR SINE MIR -19 243 25 2367 86 0 0 chr5 106463478 106463769 -96621763 - AluSx SINE Alu -17 295 5 566 225 25 65 chr5 106464587 106464621 -96620911 - L1ME2 LINE L1 -9 6155 6121 1879 149 3 33 chr5 106464621 106464922 -96620610 + AluJo SINE Alu 1 292 -20 566 225 25 65 chr5 106464922 106465087 -96620445 - L1ME2 LINE L1 -43 6121 5964 948 293 39 32 chr5 106465742 106466152 -96619380 - MLT1J LTR MaLR -94 417 5 607 241 87 98 chr5 106468227 106468770 -96616762 - MER34C LTR ERV1 -19 566 30 1174 186 46 63 chr5 106468868 106469558 -96615974 - MER4A LTR ERV1 0 685 2 206 143 20 41 chr5 106469739 106469788 -96615744 + (TAA)n Simple_repeat Simple_repeat 2 49 0 602 309 59 42 chr5 106470117 106470353 -96615179 - MIR SINE MIR -1 261 22 240 157 20 0 chr5 106471524 106471575 -96613957 - L1MA9 LINE L1 -1 6311 6260 1922 146 52 22 chr5 106471723 106472085 -96613447 + THE1C LTR MaLR 3 375 0 581 301 107 45 chr5 106472087 106472291 -96613241 - L2 LINE L2 -7 3306 3069 204 40 0 0 chr5 106472291 106472316 -96613216 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 581 301 107 45 chr5 106472316 106472467 -96613065 - L2 LINE L2 -244 3069 2929 421 309 140 16 chr5 106472549 106472792 -96612740 - L2 LINE L2 -979 2335 2063 232 249 20 122 chr5 106472834 106472911 -96612621 + HAL1 LINE L1 6 89 -2418 1670 190 0 20 chr5 106472911 106473211 -96612321 - AluJb SINE Alu -14 298 5 232 249 20 122 chr5 106473211 106473330 -96612202 + HAL1 LINE L1 89 182 -2325 1485 252 45 97 chr5 106473641 106474096 -96611436 + HAL1 LINE L1 745 1222 -1285 671 183 0 25 chr5 106474096 106474216 -96611316 + FLAM_A SINE Alu 3 119 -14 1485 252 45 97 chr5 106474216 106474559 -96610973 + HAL1 LINE L1 1222 1485 -1022 2061 115 3 65 chr5 106474559 106474690 -96610842 + AluJb SINE Alu 5 143 -169 2106 131 3 0 chr5 106474690 106474981 -96610551 + AluSq SINE Alu 1 292 -21 2061 115 3 65 chr5 106474981 106475172 -96610360 + AluJb SINE Alu 143 307 -5 1485 252 45 97 chr5 106475172 106475347 -96610185 + HAL1 LINE L1 1485 1668 -839 3868 217 25 25 chr5 106475526 106476525 -96609007 + Charlie1a DNA MER1_type 6 1004 -451 2029 116 8 0 chr5 106476527 106476857 -96608675 + AluSg SINE Alu 23 539 -33 1058 98 6 22 chr5 106476857 106477040 -96608492 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2029 116 8 0 chr5 106477040 106477075 -96608457 + AluSg SINE Alu 539 572 0 231 198 12 37 chr5 106477075 106477156 -96608376 + HAL1 LINE L1 2074 2152 -355 319 306 88 36 chr5 106477177 106477370 -96608162 + HAL1b LINE L1 733 935 -413 310 140 158 79 chr5 106477438 106477602 -96607930 + HAL1 LINE L1 2226 2402 -105 322 165 0 88 chr5 106477626 106477685 -96607847 - MER53 DNA DNA 0 189 139 2650 36 0 0 chr5 106477685 106477992 -96607540 - AluY SINE Alu -4 307 1 322 165 0 88 chr5 106477992 106478023 -96607509 - MER53 DNA DNA -50 139 107 180 0 0 0 chr5 106478151 106478171 -96607361 + (T)n Simple_repeat Simple_repeat 1 20 0 2201 117 0 3 chr5 106478190 106478489 -96607043 + AluSq SINE Alu 1 298 -15 334 286 45 20 chr5 106478489 106478688 -96606844 - L2 LINE L2 -1319 1995 1792 22 0 0 0 chr5 106480779 106480801 -96604731 + AT_rich Low_complexity Low_complexity 1 22 0 459 268 35 10 chr5 106481429 106481627 -96603905 - L1MEc LINE L1 -3677 2538 2336 715 169 14 7 chr5 106481652 106481794 -96603738 - L1MC2 LINE L1 -222 6122 5980 1633 242 98 22 chr5 106481857 106482530 -96603002 - L1MEc LINE L1 -4046 2350 1627 847 167 65 0 chr5 106482549 106482735 -96602797 - L1MC2 LINE L1 -10 6334 6137 3462 188 39 33 chr5 106482735 106483555 -96601977 - L1MC3 LINE L1 -191 7663 6839 4172 184 41 46 chr5 106483567 106484143 -96601389 - L1MC3 LINE L1 -743 5472 4894 2460 53 7 3 chr5 106484143 106484445 -96601087 + AluY SINE Alu 1 303 -8 4172 184 41 46 chr5 106484445 106484882 -96600650 - L1MC3 LINE L1 -1321 4894 5228 6165 58 10 0 chr5 106484882 106485672 -96599860 + L1PA8 LINE L1 5372 6169 -3 4172 184 41 46 chr5 106485672 106486632 -96598900 - L1MC3 LINE L1 -986 5229 4265 1088 229 82 3 chr5 106486624 106487150 -96598382 + L1MEc LINE L1 2134 2733 -3874 * 936 224 19 5 chr5 106487175 106487380 -96598152 - L1MC3 LINE L1 -6154 242 35 3619 298 38 11 chr5 106487493 106488902 -96596630 - ERVL LTR ERVL -1245 4519 2989 670 340 44 6 chr5 106488898 106489251 -96596281 - ERVL LTR ERVL -2245 2751 2456 * 1991 220 72 34 chr5 106489251 106489782 -96595750 - MLT2B3 LTR ERVL 0 554 4 1126 304 45 34 chr5 106489785 106490865 -96594667 - ERVL LTR ERVL -3266 2498 1347 229 220 50 110 chr5 106490868 106490968 -96594564 + MER53 DNA DNA 1 94 -95 24 32 0 0 chr5 106491508 106491539 -96593993 + AT_rich Low_complexity Low_complexity 1 31 0 33915 104 11 10 chr5 106491542 106497354 -96588178 + L1PA7 LINE L1 13 5829 -325 41116 44 6 1 chr5 106497355 106503482 -96582050 + L1PA4 LINE L1 1 6155 0 2369 85 9 0 chr5 106503502 106503833 -96581699 + L1PA7 LINE L1 5815 6148 -6 197 139 23 0 chr5 106503857 106503900 -96581632 + (TA)n Simple_repeat Simple_repeat 2 45 0 2798 13 3 0 chr5 106503903 106504213 -96581319 - AluY SINE Alu 0 311 1 198 0 0 0 chr5 106504309 106504331 -96581201 + (CA)n Simple_repeat Simple_repeat 1 22 0 1254 266 37 30 chr5 106504413 106504980 -96580552 + L1MC4a LINE L1 5293 5863 -1945 1316 207 88 66 chr5 106504999 106505511 -96580021 + MER39 LTR ERV1 51 707 0 1894 139 36 0 chr5 106506761 106507041 -96578491 + AluJb SINE Alu 1 290 -22 30 27 0 0 chr5 106507153 106507190 -96578342 + AT_rich Low_complexity Low_complexity 1 37 0 396 0 0 0 chr5 106507202 106507246 -96578286 + (TG)n Simple_repeat Simple_repeat 2 45 0 646 167 18 42 chr5 106507393 106507561 -96577971 + L1MA6 LINE L1 6137 6300 0 24 32 0 0 chr5 106508925 106508956 -96576576 + AT_rich Low_complexity Low_complexity 1 31 0 188 65 0 32 chr5 106509042 106509073 -96576459 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2352 111 0 0 chr5 106510424 106510730 -96574802 + AluSx SINE Alu 1 306 -6 232 175 0 25 chr5 106511462 106511502 -96574030 + MIR SINE MIR 37 75 -187 24 0 0 0 chr5 106511526 106511550 -96573982 + AT_rich Low_complexity Low_complexity 1 24 0 272 362 72 22 chr5 106512261 106512399 -96573133 + L2 LINE L2 3124 3268 -4 615 252 144 64 chr5 106513778 106514091 -96571441 + L2 LINE L2 2976 3313 0 458 281 38 46 chr5 106514124 106514344 -96571188 - MIR SINE MIR -19 243 25 2377 86 0 0 chr5 106514345 106514637 -96570895 - AluSx SINE Alu -16 296 5 1253 206 44 34 chr5 106515453 106515487 -96570045 - L1ME2 LINE L1 -9 6415 6383 1860 152 3 33 chr5 106515487 106515789 -96569743 + AluJo SINE Alu 1 293 -19 1253 206 44 34 chr5 106515789 106516142 -96569390 - L1ME2 LINE L1 -41 6383 6024 6472 221 86 78 chr5 106516153 106516741 -96568791 - L1ME2 LINE L1 -816 5590 5008 189 0 0 0 chr5 106516741 106516762 -96568770 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 6472 221 86 78 chr5 106516762 106517429 -96568103 - L1ME2 LINE L1 -1398 5008 4348 1657 184 0 0 chr5 106517429 106517707 -96567825 - AluJb SINE Alu -5 307 30 6472 221 86 78 chr5 106517707 106518135 -96567397 - L1ME2 LINE L1 -2058 4348 3925 189 0 0 0 chr5 106518135 106518156 -96567376 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 1947 151 0 0 chr5 106518158 106518437 -96567095 - AluSx SINE Alu -32 280 2 6472 221 86 78 chr5 106518437 106518624 -96566908 - L1ME2 LINE L1 -2481 3925 3741 2202 92 13 9 chr5 106518624 106518939 -96566593 - L1PA10 LINE L1 -11 6157 5842 6472 221 86 78 chr5 106518939 106519665 -96565867 - L1ME2 LINE L1 -2665 3741 3022 253 83 0 0 chr5 106519665 106519701 -96565831 - MADE1 DNA Mariner 0 80 45 6472 221 86 78 chr5 106519701 106520332 -96565200 - L1ME2 LINE L1 -3384 3022 2296 2644 240 58 33 chr5 106520365 106521589 -96563943 - L1ME2 LINE L1 -5253 1156 9 25 0 0 0 chr5 106521989 106522014 -96563518 + AT_rich Low_complexity Low_complexity 1 25 0 416 263 167 6 chr5 106522296 106522452 -96563080 - MER5A DNA MER1_type 0 189 9 237 381 24 32 chr5 106522460 106522586 -96562946 + L3 LINE CR1 1043 1167 -410 1557 191 92 3 chr5 106522587 106522922 -96562610 + MLT1A1 LTR MaLR 1 365 0 402 285 101 24 chr5 106523048 106523378 -96562154 + L1ME LINE L1 5348 5706 -415 2355 63 0 3 chr5 106523400 106523715 -96561817 + AluY SINE Alu 1 314 0 276 344 128 44 chr5 106523761 106523941 -96561591 + L3 LINE CR1 1368 1562 -15 31 44 0 0 chr5 106524520 106524565 -96560967 + AT_rich Low_complexity Low_complexity 1 45 0 580 308 46 38 chr5 106525208 106525448 -96560084 + MIR SINE MIR 21 262 0 252 189 14 68 chr5 106525661 106525735 -96559797 - MIR SINE MIR -120 88 19 1951 156 15 24 chr5 106525851 106526191 -96559341 - MER1B DNA MER1_type 0 337 1 896 211 255 9 chr5 106526315 106526862 -96558670 - LTR50 LTR ERVL -19 776 3 582 215 26 91 chr5 106527787 106527995 -96557537 - MIR SINE MIR -2 260 62 496 313 72 32 chr5 106528601 106528850 -96556682 - MIR SINE MIR -2 260 2 2533 81 0 0 chr5 106529989 106530296 -96555236 - AluSc SINE Alu -2 307 1 413 152 203 0 chr5 106531965 106532044 -96553488 + MER5A DNA MER1_type 12 106 -83 33 43 0 0 chr5 106532640 106532687 -96552845 + AT_rich Low_complexity Low_complexity 1 47 0 3264 120 42 6 chr5 106532991 106533540 -96551992 - LTR24B LTR ERV1 -7 569 1 494 276 80 23 chr5 106534782 106535170 -96550362 + L1MC5 LINE L1 7498 7907 -54 2393 69 3 0 chr5 106535379 106535670 -96549862 - AluSc SINE Alu -13 296 5 595 303 16 21 chr5 106536192 106536380 -96549152 + L2 LINE L2 3126 3312 -1 270 330 28 9 chr5 106536495 106536604 -96548928 - MER5A DNA MER1_type -28 161 51 190 204 23 0 chr5 106536693 106536737 -96548795 + L2 LINE L2 3269 3313 0 212 302 135 8 chr5 106537347 106537473 -96548059 + MIR3 SINE MIR 67 208 0 497 259 103 22 chr5 106537473 106537697 -96547835 - L2 LINE L2 -37 3276 3035 289 203 40 27 chr5 106537894 106537968 -96547564 - Charlie8 DNA MER1_type -2248 169 95 1913 207 30 22 chr5 106537984 106538443 -96547089 - MLT1C LTR MaLR -2 465 3 280 217 98 33 chr5 106538576 106538668 -96546864 + L2 LINE L2 3194 3291 -22 183 80 0 0 chr5 106538673 106538698 -96546834 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1763 154 3 21 chr5 106538958 106539282 -96546250 - AluSx SINE Alu 0 319 1 197 33 33 0 chr5 106539548 106539578 -96545954 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 256 309 45 81 chr5 106539593 106539816 -96545716 + MLT1J LTR MaLR 242 456 -55 536 272 75 6 chr5 106539834 106540007 -96545525 + LTR33A LTR ERVL 4 188 -335 26 0 0 0 chr5 106541072 106541098 -96544434 + AT_rich Low_complexity Low_complexity 1 26 0 184 325 50 0 chr5 106541994 106542074 -96543458 - MIR3 SINE MIR -6 202 119 274 310 11 0 chr5 106542110 106542197 -96543335 - MER81 DNA DNA 0 114 27 818 298 16 27 chr5 106542974 106543232 -96542300 - MIR SINE MIR 0 262 8 1626 92 6 160 chr5 106543664 106543989 -96541543 + AluSg1 SINE Alu 21 295 -14 1961 164 0 0 chr5 106544525 106544818 -96540714 - AluSx SINE Alu -19 293 1 227 330 44 0 chr5 106545274 106545365 -96540167 + L2 LINE L2 2258 2352 -962 585 170 0 0 chr5 106545398 106545539 -96539993 + (TG)n Simple_repeat Simple_repeat 1 141 0 310 238 238 0 chr5 106546017 106546122 -96539410 + L2 LINE L2 3134 3263 -9 344 274 58 47 chr5 106546130 106546320 -96539212 + L2 LINE L2 2703 2894 -420 2266 79 10 3 chr5 106546748 106547039 -96538493 + AluY SINE Alu 1 293 -18 1671 164 7 20 chr5 106548227 106548520 -96537012 + AluSx SINE Alu 1 289 -23 2518 65 0 3 chr5 106548867 106549177 -96536355 - AluY SINE Alu -2 309 1 399 284 61 20 chr5 106549226 106549423 -96536109 + L2 LINE L2 2855 3059 -213 1094 210 5 0 chr5 106549493 106549693 -96535839 + MER45B DNA AcHobo 1 201 -839 1185 214 54 16 chr5 106549736 106550049 -96535483 + MLT1A1 LTR MaLR 30 354 -11 3147 217 63 6 chr5 106550056 106550853 -96534679 + MER45B DNA AcHobo 195 1036 -4 2262 180 40 30 chr5 106552167 106552666 -96532866 + MLT1D LTR MaLR 1 504 -1 1269 174 50 50 chr5 106552893 106553215 -96532317 - MLT1B LTR MaLR -68 322 1 232 339 0 0 chr5 106554005 106554067 -96531465 + polypurine Low_complexity Low_complexity 2 63 0 1353 199 113 66 chr5 106554736 106555233 -96530299 + MLT2B1 LTR ERVL 1 520 0 222 37 0 0 chr5 106556079 106556106 -96529426 + (A)n Simple_repeat Simple_repeat 1 27 0 201 333 0 0 chr5 106557211 106557274 -96528258 + CT-rich Low_complexity Low_complexity 4 66 0 4776 142 90 61 chr5 106558271 106559727 -96525805 + pTR5 LTR ERV1 769 2438 0 303 284 0 0 chr5 106559730 106559797 -96525735 - MER81 DNA DNA -44 70 4 408 331 66 12 chr5 106559798 106559964 -96525568 + MIR SINE MIR 51 225 -37 210 71 0 0 chr5 106560190 106560218 -96525314 + (T)n Simple_repeat Simple_repeat 1 28 0 1799 168 61 2 chr5 106560229 106560595 -96524937 + MER47B DNA MER2_type 28 415 -3 363 289 36 115 chr5 106561170 106561270 -96524262 - MLT1J LTR MaLR 0 511 405 2131 152 19 19 chr5 106561270 106561645 -96523887 - THE1C LTR MaLR 0 375 1 363 289 36 115 chr5 106561645 106561874 -96523658 - MLT1J LTR MaLR -106 405 235 2336 104 0 0 chr5 106561874 106562182 -96523350 - AluSg SINE Alu -2 308 1 363 289 36 115 chr5 106562182 106562373 -96523159 - MLT1J LTR MaLR -276 235 31 2304 102 0 7 chr5 106563675 106563969 -96521563 - AluSg SINE Alu -18 292 1 1473 201 42 11 chr5 106564520 106564804 -96520728 - AluJb SINE Alu -19 293 1 231 238 150 0 chr5 106565246 106565326 -96520206 + L1ME4a LINE L1 5974 6065 -56 342 80 0 0 chr5 106566066 106566116 -96519416 + (TC)n Simple_repeat Simple_repeat 1 50 0 318 254 90 33 chr5 106566234 106566356 -96519176 + MIR SINE MIR 16 144 -64 964 290 50 35 chr5 106566534 106566930 -96518602 + LTR16B LTR ERVL 43 444 -20 283 309 168 40 chr5 106567229 106567675 -96517857 + L2 LINE L2 2809 3311 -2 200 344 40 40 chr5 106567953 106568104 -96517428 + MIR SINE MIR 35 185 -77 316 271 26 86 chr5 106569349 106569500 -96516032 + MIR SINE MIR 15 156 -106 325 67 0 22 chr5 106569731 106569776 -96515756 + MSTD LTR MaLR 1 44 -352 1230 215 131 31 chr5 106569883 106570204 -96515328 + MSTD LTR MaLR 44 396 0 531 295 146 18 chr5 106570873 106571202 -96514330 - L2 LINE L2 -2 3311 2941 2234 108 3 0 chr5 106571310 106571605 -96513927 + AluSx SINE Alu 1 296 -16 1528 40 0 0 chr5 106571637 106571811 -96513721 - AluY SINE Alu -137 174 1 2297 189 70 94 chr5 106571812 106572005 -96513527 - L1M4 LINE L1 -505 5669 5473 234 0 0 0 chr5 106572005 106572031 -96513501 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2297 189 70 94 chr5 106572031 106572962 -96512570 - L1M4 LINE L1 -701 5473 4591 2197 115 0 16 chr5 106572962 106573276 -96512256 - AluSq SINE Alu -4 309 1 2297 189 70 94 chr5 106573276 106573511 -96512021 - L1M4 LINE L1 -1583 4591 4352 254 325 106 38 chr5 106575427 106575692 -96509840 - L3b LINE CR1 -8 1575 1293 415 292 83 14 chr5 106576032 106576176 -96509356 + MIR SINE MIR 102 255 -7 182 164 91 18 chr5 106576218 106576273 -96509259 + MIR SINE MIR 103 161 -101 23 78 0 0 chr5 106576626 106576677 -96508855 + AT_rich Low_complexity Low_complexity 1 51 0 585 250 176 6 chr5 106577187 106577363 -96508169 - MIR SINE MIR -26 236 31 2258 119 0 0 chr5 106578124 106578436 -96507096 + AluSx SINE Alu 1 312 0 1041 214 70 51 chr5 106580578 106580952 -96504580 - LTR16A LTR ERVL -69 381 1 22 0 0 0 chr5 106581266 106581288 -96504244 + AT_rich Low_complexity Low_complexity 1 22 0 267 289 111 24 chr5 106581571 106581779 -96503753 + L2 LINE L2 2812 3037 -235 358 264 157 8 chr5 106582215 106582336 -96503196 + L2 LINE L2 3173 3311 -2 2135 116 0 23 chr5 106582545 106582846 -96502686 - AluSq SINE Alu -15 298 5 1028 241 4 29 chr5 106582860 106583105 -96502427 - MIR SINE MIR -21 241 3 1324 140 29 86 chr5 106583314 106583474 -96502058 + L1MB8 LINE L1 5883 6018 -160 2021 130 10 17 chr5 106583474 106583609 -96501923 + AluSx SINE Alu 3 137 -175 2236 117 0 0 chr5 106583609 106583916 -96501616 + AluSc SINE Alu 1 307 -2 2021 130 10 17 chr5 106583916 106584081 -96501451 + AluSx SINE Alu 137 301 -11 1324 140 29 86 chr5 106584081 106584234 -96501298 + L1MB8 LINE L1 6018 6178 0 24 32 0 0 chr5 106584434 106584465 -96501067 + AT_rich Low_complexity Low_complexity 1 31 0 2308 198 42 49 chr5 106584536 106584709 -96500823 - L1MD3 LINE L1 -15 7980 7807 2206 105 7 3 chr5 106584709 106585013 -96500519 + AluSx SINE Alu 1 305 -7 2308 198 42 49 chr5 106585013 106585409 -96500123 - L1MD3 LINE L1 -188 7807 7415 235 182 18 36 chr5 106585409 106585464 -96500068 - MLT1F1 LTR MaLR -437 130 77 25 31 0 0 chr5 106585617 106585649 -96499883 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 106585694 106585715 -96499817 + AT_rich Low_complexity Low_complexity 1 21 0 40 59 0 0 chr5 106585854 106585922 -96499610 + AT_rich Low_complexity Low_complexity 1 68 0 831 291 77 45 chr5 106586105 106586243 -96499289 - L2 LINE L2 -52 3261 3129 2125 111 10 0 chr5 106586243 106586532 -96499000 + AluSq SINE Alu 1 292 -21 831 291 77 45 chr5 106586532 106586795 -96498737 - L2 LINE L2 -184 3129 2847 747 143 20 54 chr5 106586910 106587057 -96498475 - MER65A LTR ERV1 0 445 304 * 3993 126 54 29 chr5 106587045 106587533 -96497999 - Tigger3b DNA MER2_type -2323 705 194 1818 165 7 3 chr5 106587533 106587836 -96497696 - AluJo SINE Alu -8 304 1 3993 126 54 29 chr5 106587836 106588032 -96497500 - Tigger3b DNA MER2_type -2834 194 4 212 330 87 37 chr5 106588696 106588914 -96496618 - L2 LINE L2 -703 2611 2383 400 271 68 27 chr5 106589078 106589254 -96496278 - MIR SINE MIR -56 152 3 193 167 28 0 chr5 106589891 106589927 -96495605 - MER5B DNA MER1_type -2 176 140 385 313 87 20 chr5 106590008 106590234 -96495298 + MIR SINE MIR 5 240 -22 989 160 16 52 chr5 106590580 106590774 -96494758 + MER5A DNA MER1_type 2 188 -1 2412 58 0 0 chr5 106590781 106591073 -96494459 + AluY SINE Alu 4 295 -16 2710 142 53 0 chr5 106591599 106592051 -96493481 - L1MA6 LINE L1 -1 6299 5824 423 190 61 129 chr5 106592051 106592214 -96493318 + MIR SINE MIR 48 199 -63 2548 147 34 27 chr5 106592246 106592416 -96493116 + MER65A LTR ERV1 1 168 -277 2383 123 131 13 chr5 106592416 106592797 -96492735 - MSTA LTR MaLR -2 426 1 2548 147 34 27 chr5 106592797 106593068 -96492464 + MER65A LTR ERV1 168 445 0 388 291 191 0 chr5 106593182 106593323 -96492209 - MER5A DNA MER1_type 0 189 22 685 114 0 0 chr5 106593634 106593739 -96491793 + THE1B-int LTR MaLR 1476 1580 0 2336 121 8 91 chr5 106593739 106594136 -96491396 + THE1B LTR MaLR 1 364 0 6267 184 62 3 chr5 106594136 106594694 -96490838 + L1PA16 LINE L1 3835 4358 -1808 192 77 0 0 chr5 106594694 106594720 -96490812 + (CA)n Simple_repeat Simple_repeat 1 26 0 6267 184 62 3 chr5 106594720 106596365 -96489167 + L1PA16 LINE L1 4358 6166 0 261 163 0 0 chr5 106596624 106596673 -96488859 + (CATA)n Simple_repeat Simple_repeat 2 50 0 1144 255 81 14 chr5 106596775 106597207 -96488325 - L1M4 LINE L1 -1299 4847 4387 588 269 57 10 chr5 106597213 106597406 -96488126 - MIR SINE MIR -58 204 3 183 212 0 0 chr5 106597580 106597613 -96487919 - MER5A DNA MER1_type -86 103 71 243 232 182 10 chr5 106597751 106597850 -96487682 - MIR SINE MIR -78 184 69 214 241 19 0 chr5 106597843 106597897 -96487635 - MER5A DNA MER1_type -132 57 3 * 2140 154 36 14 chr5 106598737 106599094 -96486438 + MER47A DNA MER2_type 2 366 0 3230 96 25 14 chr5 106599566 106600006 -96485526 - MLT2A2 LTR ERVL -8 445 1 372 345 8 60 chr5 106600261 106600496 -96485036 - MIR SINE MIR -31 231 9 432 97 0 0 chr5 106600529 106600591 -96484941 + (CA)n Simple_repeat Simple_repeat 2 63 0 2487 76 0 10 chr5 106601284 106601598 -96483934 + AluY SINE Alu 1 311 0 5127 146 91 68 chr5 106602116 106603594 -96481938 + pTR5 LTR ERV1 743 2438 0 314 299 0 0 chr5 106603597 106603664 -96481868 - MER81 DNA DNA -44 70 4 400 323 65 13 chr5 106603676 106603831 -96481701 + MIR SINE MIR 63 225 -37 1951 168 61 2 chr5 106604092 106604458 -96481074 + MER47B DNA MER2_type 28 415 -3 520 290 36 114 chr5 106605033 106605133 -96480399 - MLT1J LTR MaLR 0 511 405 2306 152 19 19 chr5 106605133 106605508 -96480024 - THE1C LTR MaLR 0 375 1 520 290 36 114 chr5 106605508 106605737 -96479795 - MLT1J LTR MaLR -106 405 236 2337 104 0 0 chr5 106605737 106606045 -96479487 - AluSg SINE Alu -2 308 1 520 290 36 114 chr5 106606045 106606238 -96479294 - MLT1J LTR MaLR -275 236 29 2434 85 0 7 chr5 106606635 106606941 -96478591 - AluSg SINE Alu -6 304 1 1448 201 42 11 chr5 106607492 106607776 -96477756 - AluJb SINE Alu -19 293 1 255 228 165 0 chr5 106608218 106608297 -96477235 + L1ME4a LINE L1 5974 6065 -56 342 80 0 0 chr5 106609037 106609087 -96476445 + (TC)n Simple_repeat Simple_repeat 1 50 0 955 293 50 35 chr5 106609533 106609929 -96475603 + LTR16B LTR ERVL 43 444 -20 23 0 0 0 chr5 106612560 106612583 -96472949 + AT_rich Low_complexity Low_complexity 1 23 0 2581 43 0 3 chr5 106613042 106613345 -96472187 - AluY SINE Alu -9 302 1 770 251 25 15 chr5 106614506 106614705 -96470827 + MIR SINE MIR 24 224 -38 32 26 0 0 chr5 106614736 106614775 -96470757 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 106614899 106614920 -96470612 + AT_rich Low_complexity Low_complexity 1 21 0 25 95 0 0 chr5 106615352 106615426 -96470106 + AT_rich Low_complexity Low_complexity 1 74 0 33 73 0 0 chr5 106615434 106615502 -96470030 + AT_rich Low_complexity Low_complexity 1 68 0 2315 94 0 13 chr5 106615681 106615990 -96469542 + AluSq SINE Alu 1 305 -8 2736 26 3 0 chr5 106616747 106617052 -96468480 + AluYb8 SINE Alu 2 307 -11 221 276 48 9 chr5 106617348 106617453 -96468079 + L2 LINE L2 3119 3227 -86 1917 125 4 7 chr5 106617511 106617791 -96467741 + AluSg1 SINE Alu 1 306 0 223 37 0 0 chr5 106617791 106617818 -96467714 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 278 314 71 24 chr5 106617922 106618091 -96467441 - MIR SINE MIR 0 262 86 22 35 0 0 chr5 106618320 106618349 -96467183 + AT_rich Low_complexity Low_complexity 1 29 0 573 312 23 9 chr5 106618896 106619111 -96466421 - MIR SINE MIR -24 238 21 251 367 110 0 chr5 106620421 106620530 -96465002 - MIR SINE MIR -140 122 2 1406 212 49 35 chr5 106621034 106621440 -96464092 + MLT1C LTR MaLR 56 467 0 274 240 67 67 chr5 106622099 106622203 -96463329 - MIR SINE MIR -56 206 103 1049 135 0 0 chr5 106622211 106622359 -96463173 - AluSq/x SINE Alu -165 148 1 257 0 0 29 chr5 106622812 106622846 -96462686 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 303 242 117 33 chr5 106623168 106623288 -96462244 - MER103 DNA DNA -19 147 18 1534 224 3 0 chr5 106623776 106624070 -96461462 - AluJo SINE Alu -15 297 3 25 0 0 0 chr5 106624076 106624101 -96461431 + AT_rich Low_complexity Low_complexity 1 25 0 363 277 45 45 chr5 106624315 106624470 -96461062 + L2 LINE L2 968 1122 -2192 861 203 66 119 chr5 106624500 106624843 -96460689 - MLT1A1 LTR MaLR -55 341 1 23 0 0 0 chr5 106624985 106625008 -96460524 + AT_rich Low_complexity Low_complexity 1 23 0 1740 179 3 3 chr5 106625276 106625577 -96459955 - AluJo SINE Alu -10 302 2 363 23 0 0 chr5 106625653 106625697 -96459835 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr5 106626071 106626094 -96459438 + AT_rich Low_complexity Low_complexity 1 23 0 245 186 0 0 chr5 106627831 106627890 -96457642 + L1MC4 LINE L1 6647 6705 -1337 25 65 0 0 chr5 106628139 106628185 -96457347 + AT_rich Low_complexity Low_complexity 1 46 0 1931 192 11 0 chr5 106628413 106628778 -96456754 - L1MB7 LINE L1 -199 5985 5617 1530 138 53 7 chr5 106628918 106629200 -96456332 - Tigger2 DNA MER2_type -2423 295 1 1735 174 7 3 chr5 106629511 106629816 -96455716 - AluSx SINE Alu -6 306 1 221 191 0 0 chr5 106630325 106630367 -96455165 + L2 LINE L2 3269 3310 -3 220 261 250 0 chr5 106630978 106631066 -96454466 + MIR SINE MIR 81 190 -72 24 53 0 0 chr5 106631217 106631255 -96454277 + AT_rich Low_complexity Low_complexity 1 38 0 298 295 74 0 chr5 106631602 106631697 -96453835 - MER5A DNA MER1_type -87 102 1 187 261 78 33 chr5 106631713 106631866 -96453666 - MER5C DNA MER1_type -38 286 127 34 84 0 0 chr5 106632186 106632269 -96453263 + AT_rich Low_complexity Low_complexity 1 83 0 27 29 0 0 chr5 106634232 106634266 -96451266 + AT_rich Low_complexity Low_complexity 1 34 0 452 135 0 0 chr5 106634993 106635067 -96450465 - L1MB5 LINE L1 -9 6165 6092 27 0 0 0 chr5 106636998 106637025 -96448507 + AT_rich Low_complexity Low_complexity 1 27 0 216 0 0 0 chr5 106637725 106637749 -96447783 + (T)n Simple_repeat Simple_repeat 1 24 0 461 129 14 0 chr5 106637755 106637825 -96447707 - AluJ/FLAM SINE Alu -241 71 1 2188 80 0 17 chr5 106638503 106638836 -96446696 + AluY SINE Alu 1 328 0 217 239 28 0 chr5 106639162 106639233 -96446299 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 604 208 121 64 chr5 106639268 106639441 -96446091 + MER20 DNA MER1_type 37 219 0 2236 89 3 26 chr5 106640007 106640310 -96445222 + AluSc SINE Alu 1 296 -13 489 199 84 8 chr5 106641250 106641381 -96444151 - MLT1C LTR MaLR -326 141 1 347 308 51 0 chr5 106641738 106641855 -96443677 - L2 LINE L2 -8 3305 3183 213 39 0 0 chr5 106641883 106641909 -96443623 + (CATA)n Simple_repeat Simple_repeat 4 29 0 218 288 72 58 chr5 106642038 106642177 -96443355 - L2 LINE L2 -159 3154 3014 284 273 100 27 chr5 106642668 106642778 -96442754 + MIR3 SINE MIR 84 201 -7 1582 163 102 3 chr5 106643936 106644249 -96441283 - L1MC1 LINE L1 0 6333 5990 438 312 63 25 chr5 106644610 106644847 -96440685 - L1MCc LINE L1 -5049 1374 1129 425 306 61 10 chr5 106645463 106645659 -96439873 - L1MCc LINE L1 -6192 231 26 222 204 0 0 chr5 106645929 106645978 -96439554 + T-rich Low_complexity Low_complexity 4 52 0 33 25 0 0 chr5 106646298 106646338 -96439194 + AT_rich Low_complexity Low_complexity 1 40 0 368 219 38 57 chr5 106646491 106646596 -96438936 + MLT1K LTR MaLR 371 473 -115 301 279 57 33 chr5 106646984 106647106 -96438426 + MER103 DNA DNA 3 127 -39 665 301 159 78 chr5 106647179 106647969 -96437563 + L2 LINE L2 766 1665 -1649 405 0 0 0 chr5 106647969 106648014 -96437518 + (TG)n Simple_repeat Simple_repeat 1 45 0 665 301 159 78 chr5 106648014 106648281 -96437251 + L2 LINE L2 1665 1909 -1405 1798 198 64 15 chr5 106648381 106649034 -96436498 - L1M4 LINE L1 -543 5631 4951 239 0 0 31 chr5 106649034 106649066 -96436466 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 427 200 0 0 chr5 106649068 106649148 -96436384 - AluJb SINE Alu -196 116 37 24 0 0 0 chr5 106652126 106652150 -96433382 + AT_rich Low_complexity Low_complexity 1 24 0 1975 124 20 3 chr5 106652151 106652449 -96433083 + AluSg SINE Alu 1 303 -7 665 161 34 0 chr5 106652449 106652567 -96432965 - AluJo/FLAM SINE Alu -190 122 1 255 162 0 0 chr5 106652571 106652608 -96432924 - tRNA-Leu-CTT tRNA tRNA -48 37 1 438 316 78 35 chr5 106654357 106654752 -96430780 + L1ME LINE L1 5380 5791 -379 23 33 0 0 chr5 106654752 106654782 -96430750 + AT_rich Low_complexity Low_complexity 1 30 0 1885 122 3 0 chr5 106655272 106655566 -96429966 + L1P4 LINE L1 3718 4012 -2134 6100 128 14 19 chr5 106655569 106656558 -96428974 + L1PA7 LINE L1 10 993 -5468 8778 93 8 1 chr5 106656558 106656729 -96428803 + L1PA7 LINE L1 4407 4575 -1894 1933 59 4 48 chr5 106656729 106656999 -96428533 - AluY SINE Alu -13 298 41 8778 93 8 1 chr5 106656999 106658894 -96426638 + L1PA7 LINE L1 4575 6467 -2 8554 127 18 0 chr5 106658897 106660425 -96425107 + L1P4 LINE L1 3996 5548 -620 528 124 0 0 chr5 106660480 106660585 -96424947 + (TCTCCC)n Simple_repeat Simple_repeat 1 105 0 9792 208 21 21 chr5 106660686 106661419 -96424113 - L1 LINE L1 -978 5168 4436 2330 102 0 0 chr5 106661419 106661723 -96423809 + AluSq SINE Alu 1 304 -9 9792 208 21 21 chr5 106661723 106661779 -96423753 - L1 LINE L1 -1710 4436 4381 216 0 0 0 chr5 106661779 106661803 -96423729 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 9792 208 21 21 chr5 106661803 106663383 -96422149 - L1 LINE L1 -1764 4382 2798 21 57 0 0 chr5 106663651 106663686 -96421846 + AT_rich Low_complexity Low_complexity 1 35 0 224 151 0 19 chr5 106665281 106665334 -96420198 + (TA)n Simple_repeat Simple_repeat 2 53 0 203 309 0 0 chr5 106666051 106666106 -96419426 - L3b LINE CR1 -339 1244 1190 23 0 0 0 chr5 106666119 106666142 -96419390 + AT_rich Low_complexity Low_complexity 1 23 0 6826 54 5 51 chr5 106666142 106667234 -96418298 - SVA Other Other -723 1375 432 228 197 158 13 chr5 106667837 106667913 -96417619 + MIR SINE MIR 104 190 -72 377 283 189 0 chr5 106667974 106668080 -96417452 + L2 LINE L2 3147 3272 0 375 235 113 17 chr5 106668926 106669041 -96416491 - L2 LINE L2 -1 3312 3187 6231 143 8 7 chr5 106670411 106671798 -96413734 - L1PB1 LINE L1 -2 6149 4760 2135 132 28 25 chr5 106671798 106672161 -96413371 + THE1B LTR MaLR 1 364 0 6231 143 8 7 chr5 106672161 106672237 -96413295 - L1PB1 LINE L1 -1391 4760 4686 2156 116 3 13 chr5 106672301 106672604 -96412928 - AluSq SINE Alu -13 300 1 237 278 143 60 chr5 106672828 106673044 -96412488 - L2 LINE L2 -2498 816 583 255 229 0 0 chr5 106673140 106673188 -96412344 + L2 LINE L2 3254 3301 -12 2416 248 21 12 chr5 106673509 106674115 -96411417 + L1ME3A LINE L1 5559 6170 0 312 27 0 0 chr5 106674171 106674208 -96411324 + (TG)n Simple_repeat Simple_repeat 2 38 0 1886 119 55 0 chr5 106675130 106675423 -96410109 + AluSx SINE Alu 1 309 -3 282 325 12 25 chr5 106675669 106675832 -96409700 + GA-rich Low_complexity Low_complexity 3 163 0 202 175 25 0 chr5 106676778 106676818 -96408714 - L2 LINE L2 -4 3309 3269 296 318 11 11 chr5 106676926 106677014 -96408518 + MIR3 SINE MIR 8 95 -113 2728 115 16 5 chr5 106677185 106677610 -96407922 + L1M1 LINE L1 5327 5756 -547 341 297 95 27 chr5 106677656 106677804 -96407728 - MIR SINE MIR -31 231 74 24 53 0 0 chr5 106678028 106678066 -96407466 + AT_rich Low_complexity Low_complexity 1 38 0 524 45 0 0 chr5 106678956 106679023 -96406509 - L1MB2 LINE L1 -36 6135 6069 21 0 0 0 chr5 106680442 106680463 -96405069 + AT_rich Low_complexity Low_complexity 1 21 0 262 307 9 77 chr5 106680539 106680774 -96404758 + L2 LINE L2 2190 2488 -826 1174 153 0 0 chr5 106680822 106680992 -96404540 + AluJb SINE Alu 121 290 -22 697 308 65 22 chr5 106682216 106682538 -96402994 + L2 LINE L2 2978 3313 0 240 266 21 173 chr5 106682536 106682773 -96402759 - MIR SINE MIR -13 249 49 * 2212 129 3 0 chr5 106683177 106683486 -96402046 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr5 106683961 106683989 -96401543 + AT_rich Low_complexity Low_complexity 1 28 0 183 268 0 0 chr5 106684019 106684060 -96401472 - L2 LINE L2 -4 3309 3269 194 308 84 63 chr5 106684176 106684319 -96401213 - L2 LINE L2 -230 3083 2938 358 250 30 10 chr5 106684401 106684501 -96401031 - L2 LINE L2 -381 2932 2831 346 292 107 18 chr5 106685387 106685555 -96399977 - MIR SINE MIR -40 222 40 2395 97 0 0 chr5 106686274 106686582 -96398950 - AluSg SINE Alu -2 308 1 446 259 7 36 chr5 106686901 106687040 -96398492 - LTR27 LTR ERV1 -2 634 500 2148 170 155 50 chr5 106687051 106687377 -96398155 - LTR28 LTR ERV1 -421 599 309 2241 119 7 0 chr5 106687377 106687680 -96397852 + AluSx SINE Alu 2 306 -6 2148 170 155 50 chr5 106687680 106687895 -96397637 - LTR28 LTR ERV1 -711 309 1 2076 120 7 10 chr5 106688003 106688302 -96397230 + AluSx SINE Alu 1 298 -14 255 295 29 23 chr5 106688417 106688590 -96396942 + L1M4 LINE L1 2975 3148 -2998 220 296 127 0 chr5 106688905 106688976 -96396556 + L2 LINE L2 3234 3313 0 265 330 0 10 chr5 106691096 106691199 -96394333 - MIR SINE MIR -63 199 98 4526 207 36 11 chr5 106691393 106692772 -96392760 - L1M4 LINE L1 -547 5637 4226 203 125 25 0 chr5 106693777 106693817 -96391715 + GA-rich Low_complexity Low_complexity 1 41 0 2234 101 10 0 chr5 106694946 106695244 -96390288 - AluSx SINE Alu -11 301 1 2740 77 3 0 chr5 106695343 106695695 -96389837 - THE1A LTR MaLR 0 355 3 11693 91 2 1 chr5 106695697 106697275 -96388257 - THE1A-int LTR MaLR 0 1580 1 2688 84 3 3 chr5 106697275 106697630 -96387902 - THE1A LTR MaLR 0 355 1 871 212 0 22 chr5 106699434 106699613 -96385919 + FAM SINE Alu 1 175 0 481 42 28 14 chr5 106699618 106699690 -96385842 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 232 204 20 0 chr5 106700541 106700590 -96384942 - L2 LINE L2 -3 3310 3261 1918 84 16 0 chr5 106701421 106701670 -96383862 + AluSg SINE Alu 27 279 -31 837 97 0 0 chr5 106701702 106701815 -96383717 - AluSg/x SINE Alu -11 299 187 304 332 19 68 chr5 106701845 106702050 -96383482 - MER91A DNA MER1_type -1 195 1 26 0 0 0 chr5 106702129 106702155 -96383377 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 106704621 106704650 -96380882 + AT_rich Low_complexity Low_complexity 1 29 0 228 67 0 0 chr5 106704984 106705014 -96380518 + (TG)n Simple_repeat Simple_repeat 2 31 0 2036 111 6 41 chr5 106705014 106705321 -96380211 - AluSq SINE Alu -15 298 1 321 353 157 10 chr5 106705921 106706227 -96379305 - L3b LINE CR1 -131 1452 1102 2359 63 0 30 chr5 106706513 106706682 -96378850 + AluY SINE Alu 1 159 -152 309 68 0 0 chr5 106706682 106706726 -96378806 + (CCCTAA)n Simple_repeat Simple_repeat 1 44 0 2359 63 0 30 chr5 106706726 106706857 -96378675 + AluY SINE Alu 159 292 -19 189 254 90 15 chr5 106707816 106707883 -96377649 + MIR3 SINE MIR 6 77 -131 30 45 0 0 chr5 106708777 106708821 -96376711 + AT_rich Low_complexity Low_complexity 1 44 0 621 49 0 0 chr5 106715063 106715144 -96370388 + (CCTA)n Simple_repeat Simple_repeat 2 82 0 2313 86 0 0 chr5 106716506 106716798 -96368734 - AluSg SINE Alu -18 292 1 270 176 0 0 chr5 106719544 106719595 -96365937 + (CA)n Simple_repeat Simple_repeat 2 52 0 248 325 13 0 chr5 106719814 106719891 -96365641 - MER2 DNA MER2_type 0 345 268 861 141 61 94 chr5 106719949 106720162 -96365370 - MER2 DNA MER2_type -138 207 2 217 301 32 11 chr5 106720164 106720257 -96365275 + MIR SINE MIR 72 166 -96 206 268 0 0 chr5 106720353 106720394 -96365138 + L2 LINE L2 3210 3250 -22 696 236 47 0 chr5 106723117 106723265 -96362267 + FRAM SINE Alu 1 154 -22 484 236 187 6 chr5 106723428 106723610 -96361922 + L1MA9 LINE L1 6056 6270 -42 232 300 17 0 chr5 106724025 106724085 -96361447 + L2 LINE L2 3210 3270 -2 21 0 0 0 chr5 106726015 106726036 -96359496 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 106727158 106727187 -96358345 + AT_rich Low_complexity Low_complexity 1 29 0 180 77 0 0 chr5 106727702 106727728 -96357804 + (GAA)n Simple_repeat Simple_repeat 1 26 0 392 311 8 8 chr5 106733500 106733619 -96351913 - MIR SINE MIR -142 120 2 23 54 0 0 chr5 106735334 106735371 -96350161 + AT_rich Low_complexity Low_complexity 1 37 0 1538 155 56 4 chr5 106736976 106737227 -96348305 + AluJb SINE Alu 7 270 -42 577 220 104 17 chr5 106737738 106737911 -96347621 - MER5A DNA MER1_type -1 188 1 215 300 95 26 chr5 106737919 106738109 -96347423 - L2 LINE L2 -556 2758 2556 827 174 11 21 chr5 106738209 106738399 -96347133 + MER53 DNA DNA 1 188 -1 343 221 69 69 chr5 106739695 106739826 -96345706 - L2 LINE L2 -8 3305 3175 348 304 18 27 chr5 106739911 106740023 -96345509 - MIR SINE MIR -80 128 18 2387 92 0 0 chr5 106741100 106741404 -96344128 + AluSq SINE Alu 1 304 -9 2166 125 0 3 chr5 106741724 106742037 -96343495 + AluSx SINE Alu 1 312 0 210 37 0 0 chr5 106743135 106743162 -96342370 + (CA)n Simple_repeat Simple_repeat 2 28 0 27 49 0 0 chr5 106743195 106743236 -96342296 + AT_rich Low_complexity Low_complexity 1 41 0 242 273 109 0 chr5 106744088 106744198 -96341334 + MER113 DNA MER1_type? 399 520 -1 298 194 42 14 chr5 106744259 106744331 -96341201 + MER116 DNA Mariner 2 75 -5 680 208 0 0 chr5 106744673 106744798 -96340734 - FLAM_C SINE Alu -8 125 1 225 207 121 95 chr5 106745603 106745719 -96339813 - MIR SINE MIR -69 139 21 373 256 138 31 chr5 106746201 106746361 -96339171 + MER5B DNA MER1_type 2 178 0 541 309 64 20 chr5 106746617 106746826 -96338706 - MIR SINE MIR -29 233 18 308 343 128 60 chr5 106749966 106750319 -96335213 + L2 LINE L2 2896 3272 0 31 0 0 0 chr5 106754673 106754704 -96330828 + AT_rich Low_complexity Low_complexity 1 31 0 357 93 0 0 chr5 106755874 106755928 -96329604 + (TG)n Simple_repeat Simple_repeat 1 54 0 2122 106 20 13 chr5 106756454 106756756 -96328776 - AluSq SINE Alu -9 304 1 2156 96 3 10 chr5 106757792 106758095 -96327437 - AluSg SINE Alu -8 302 2 21 0 0 0 chr5 106758626 106758647 -96326885 + AT_rich Low_complexity Low_complexity 1 21 0 641 284 102 46 chr5 106759243 106759813 -96325719 - L1ME4a LINE L1 -11 6110 5509 672 273 19 14 chr5 106759903 106760112 -96325420 - L2 LINE L2 -10 3303 3094 21 0 0 0 chr5 106761322 106761343 -96324189 + AT_rich Low_complexity Low_complexity 1 21 0 342 0 0 0 chr5 106763357 106763395 -96322137 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2222 99 3 0 chr5 106763405 106763689 -96321843 - AluSc SINE Alu -24 285 1 447 300 40 40 chr5 106763725 106763925 -96321607 + Charlie8 DNA MER1_type 75 274 -2143 6061 134 83 57 chr5 106763951 106765153 -96320379 - Ricksha_b DNA DNA -13 1241 9 2024 253 63 24 chr5 106766496 106767349 -96318183 - L1ME3 LINE L1 -211 5951 5023 2962 109 74 10 chr5 106767349 106767837 -96317695 + LTR44 LTR ERV1 1 519 0 2024 253 63 24 chr5 106767837 106768138 -96317394 - L1ME3 LINE L1 -1139 5023 4735 2458 116 39 0 chr5 106768334 106768715 -96316817 + L1PA13 LINE L1 5767 6162 -1 21 82 0 0 chr5 106769174 106769223 -96316309 + AT_rich Low_complexity Low_complexity 1 49 0 243 0 0 0 chr5 106769453 106769480 -96316052 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2240 102 0 3 chr5 106769482 106769777 -96315755 - AluSc SINE Alu -15 294 1 240 35 0 0 chr5 106771536 106771565 -96313967 + (A)n Simple_repeat Simple_repeat 1 29 0 336 281 106 45 chr5 106772771 106772936 -96312596 - MIR SINE MIR -25 237 50 374 289 70 0 chr5 106773033 106773147 -96312385 - L2 LINE L2 -1 3312 3191 2232 234 95 10 chr5 106774458 106775378 -96310154 - Charlie2 DNA MER1_type 0 2862 1865 256 234 78 141 chr5 106775382 106775510 -96310022 - Charlie2 DNA MER1_type -2473 309 190 731 229 46 11 chr5 106775519 106775694 -96309838 + MER5A DNA MER1_type 4 184 -5 398 244 163 0 chr5 106775701 106775836 -96309696 - Charlie2 DNA MER1_type -2581 201 45 468 307 16 16 chr5 106776351 106776478 -96309054 - L2 LINE L2 -5 3267 3141 189 349 56 24 chr5 106776826 106776952 -96308580 + L2 LINE L2 2618 2747 -567 277 221 118 0 chr5 106777248 106777316 -96308216 + LTR33 LTR ERVL 18 93 -428 434 308 52 19 chr5 106777483 106777694 -96307838 + LTR33 LTR ERVL 302 519 -2 573 291 8 8 chr5 106780141 106780275 -96305257 + L2 LINE L2 3137 3270 -2 439 306 22 8 chr5 106780301 106780435 -96305097 - MIR SINE MIR -101 161 26 2350 93 0 3 chr5 106780520 106780830 -96304702 + AluSc SINE Alu 1 309 0 183 162 0 0 chr5 106781643 106781680 -96303852 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 2204 110 3 0 chr5 106782390 106782682 -96302850 + AluSx SINE Alu 1 293 -19 365 172 0 0 chr5 106783459 106783523 -96302009 + MER5B DNA MER1_type 115 178 0 636 224 147 0 chr5 106783532 106783688 -96301844 - MER5A DNA MER1_type -1 188 10 640 277 0 0 chr5 106783705 106783853 -96301679 - MER5A DNA MER1_type 0 189 42 222 271 21 0 chr5 106784029 106784077 -96301455 - L2 LINE L2 -504 2810 2762 253 229 84 48 chr5 106784246 106784329 -96301203 - MIR SINE MIR -71 191 106 22 0 0 0 chr5 106784969 106784991 -96300541 + AT_rich Low_complexity Low_complexity 1 22 0 419 169 18 32 chr5 106785088 106785380 -96300152 + (TTATA)n Simple_repeat Simple_repeat 1 287 0 1117 271 330 18 chr5 106785938 106786771 -96298761 + L2 LINE L2 1962 3048 -265 1309 135 18 36 chr5 106786773 106786995 -96298537 - AluSx SINE Alu -17 295 78 555 106 24 0 chr5 106787096 106787181 -96298351 - AluSx SINE Alu -226 87 1 303 235 15 0 chr5 106787236 106787304 -96298228 + L2 LINE L2 3245 3313 0 686 301 83 62 chr5 106787441 106787876 -96297656 - L2 LINE L2 -1 3312 2869 663 300 49 5 chr5 106787901 106788124 -96297408 + MIR SINE MIR 1 233 -29 1570 142 112 0 chr5 106788124 106788384 -96297148 - MLT1A1 LTR MaLR 0 365 77 25 0 0 0 chr5 106788744 106788769 -96296763 + AT_rich Low_complexity Low_complexity 1 25 0 647 214 41 0 chr5 106789770 106789915 -96295617 + L1MEc LINE L1 45 195 -6201 180 293 0 85 chr5 106790010 106790092 -96295440 + MIR3 SINE MIR 5 79 -129 513 323 32 48 chr5 106790217 106790465 -96295067 - L1MEd LINE L1 -4934 1136 893 198 407 12 0 chr5 106790556 106790642 -96294890 + MIR SINE MIR 157 243 -19 2079 110 3 7 chr5 106790651 106790952 -96294580 - AluSx SINE Alu -12 300 1 305 226 52 26 chr5 106791226 106791341 -96294191 - L1MEd LINE L1 -5170 900 783 243 0 0 0 chr5 106791362 106791389 -96294143 + (TC)n Simple_repeat Simple_repeat 2 28 0 246 276 146 24 chr5 106792008 106792131 -96293401 - L1MEd LINE L1 -5860 210 73 1352 279 61 64 chr5 106792190 106792849 -96292683 + L2 LINE L2 1820 2476 -838 21 0 0 0 chr5 106793150 106793171 -96292361 + AT_rich Low_complexity Low_complexity 1 21 0 1310 91 147 0 chr5 106793477 106793675 -96291857 + MER30 DNA MER1_type 3 229 -1 597 64 0 0 chr5 106794139 106794217 -96291315 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 218 232 36 18 chr5 106796248 106796304 -96289228 + L2 LINE L2 3253 3309 -4 1888 151 0 43 chr5 106797173 106797498 -96288034 + AluJo SINE Alu 2 312 0 1297 112 89 22 chr5 106797587 106797811 -96287721 - Tigger3(Golem) DNA MER2_type -40 2989 2751 1047 32 0 0 chr5 106797920 106798044 -96287488 - L1PA7 LINE L1 -280 5874 5751 318 148 19 0 chr5 106799294 106799348 -96286184 - MLT1G1 LTR MaLR -533 62 8 565 159 152 0 chr5 106799366 106799504 -96286028 - MER5C DNA MER1_type 0 324 166 497 113 113 31 chr5 106800121 106800218 -96285314 + Tigger4(Zombi) DNA MER2_type 2626 2730 -1 202 200 18 36 chr5 106800795 106800850 -96284682 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 1929 146 21 0 chr5 106800986 106801274 -96284258 + AluSx SINE Alu 1 294 -18 593 140 49 5 chr5 106801297 106801501 -96284031 + L1MA4A LINE L1 6007 6280 -23 822 219 6 6 chr5 106801508 106801672 -96283860 + U1 snRNA snRNA 1 164 -1 279 0 0 0 chr5 106802531 106802562 -96282970 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1524 167 58 0 chr5 106802565 106802823 -96282709 - AluJo SINE Alu -31 281 9 21 0 0 0 chr5 106802838 106802859 -96282673 + AT_rich Low_complexity Low_complexity 1 21 0 2015 119 3 7 chr5 106803195 106803481 -96282051 - AluSx SINE Alu -23 289 5 285 77 0 0 chr5 106803617 106803656 -96281876 + MADE1 DNA Mariner 2 40 -40 21 0 0 0 chr5 106804505 106804526 -96281006 + AT_rich Low_complexity Low_complexity 1 21 0 865 218 130 35 chr5 106804640 106804901 -96280631 - L2 LINE L2 0 3313 3028 2440 227 142 48 chr5 106804912 106805723 -96279809 - L2 LINE L2 -544 2770 1884 378 162 0 44 chr5 106805723 106805791 -96279741 - AluS SINE Alu -238 65 1 432 257 151 11 chr5 106805925 106806104 -96279428 - L2 LINE L2 -1458 1856 1653 2302 85 6 22 chr5 106806432 106806750 -96278782 - AluSp SINE Alu 0 313 1 2011 112 3 27 chr5 106810400 106810694 -96274838 + AluSx SINE Alu 1 287 -25 24 85 0 0 chr5 106810933 106810992 -96274540 + AT_rich Low_complexity Low_complexity 1 59 0 1656 208 131 8 chr5 106811364 106811804 -96273728 - MLT2B2 LTR ERVL 0 554 1 2276 86 0 49 chr5 106813078 106813403 -96272129 - AluSq SINE Alu -4 309 1 1786 174 7 0 chr5 106813431 106813725 -96271807 + AluJo SINE Alu 1 296 -16 294 261 23 11 chr5 106814842 106814930 -96270602 + MIR SINE MIR 172 260 -2 575 265 94 6 chr5 106816381 106816551 -96268981 + MIR SINE MIR 48 232 -30 23690 138 23 25 chr5 106817422 106824333 -96261199 + L1MA3 LINE L1 17 6926 -798 1722 157 6 72 chr5 106824333 106824652 -96260880 + AluJb SINE Alu 1 298 -14 23690 138 23 25 chr5 106824652 106825451 -96260081 + L1MA3 LINE L1 6926 7724 0 704 145 22 72 chr5 106825611 106825749 -96259783 + FLAM_A SINE Alu 2 132 -1 25 0 0 0 chr5 106826336 106826361 -96259171 + AT_rich Low_complexity Low_complexity 1 25 0 527 65 0 26 chr5 106826395 106826472 -96259060 + L1MA1 LINE L1 5776 5850 -452 1399 189 0 0 chr5 106826487 106826720 -96258812 - AluJo SINE Alu -79 233 1 180 320 103 0 chr5 106826915 106826993 -96258539 - MIR SINE MIR -63 145 60 1813 122 0 0 chr5 106829891 106830128 -96255404 - AluSx SINE Alu -75 237 1 2338 93 7 3 chr5 106830908 106831218 -96254314 - AluSx SINE Alu 0 312 2 376 242 180 31 chr5 106831458 106831619 -96253913 - MIR3 SINE MIR -4 204 20 2705 73 18 42 chr5 106832117 106832155 -96253377 + THE1C LTR MaLR 1 38 -337 2357 93 0 3 chr5 106832155 106832455 -96253077 - AluSx SINE Alu -11 301 3 2705 73 18 42 chr5 106832455 106832800 -96252732 + THE1C LTR MaLR 38 375 0 1998 157 0 0 chr5 106833254 106833554 -96251978 + AluJb SINE Alu 1 300 -12 1743 146 25 54 chr5 106833822 106834137 -96251395 + AluJo SINE Alu 1 306 -6 1953 151 0 0 chr5 106834197 106834481 -96251051 - AluJb SINE Alu -28 284 1 243 103 0 0 chr5 106837364 106837403 -96248129 + (CA)n Simple_repeat Simple_repeat 2 40 0 642 239 149 50 chr5 106838335 106838557 -96246975 - MIR SINE MIR -17 245 2 1285 168 17 4 chr5 106838605 106838837 -96246695 - MER46A DNA MER2_type 0 236 2 203 286 79 24 chr5 106841041 106841167 -96244365 + L2 LINE L2 3173 3305 -8 2257 121 0 6 chr5 106841771 106842085 -96243447 - AluSx SINE Alu 0 312 1 2095 115 3 0 chr5 106843203 106843490 -96242042 + AluSq SINE Alu 2 289 -24 23 0 0 0 chr5 106843781 106843804 -96241728 + AT_rich Low_complexity Low_complexity 1 23 0 731 238 218 0 chr5 106844185 106844391 -96241141 - MIR SINE MIR 0 262 12 208 333 88 44 chr5 106845343 106845457 -96240075 + L2 LINE L2 3119 3237 -35 319 347 20 0 chr5 106845460 106845607 -96239925 - MER117 DNA MER1_type -47 150 1 441 271 133 12 chr5 106847973 106848139 -96237393 + MIR SINE MIR 20 205 -57 430 261 181 22 chr5 106848188 106848326 -96237206 - MER5A DNA MER1_type -7 182 23 619 315 168 46 chr5 106848482 106849516 -96236016 - L2 LINE L2 -399 2915 1756 2449 72 7 3 chr5 106850688 106850993 -96234539 + AluY SINE Alu 5 310 -1 197 358 98 24 chr5 106851367 106851490 -96234042 + L3 LINE CR1 1120 1251 -326 406 285 37 49 chr5 106851500 106851746 -96233786 - MLT1K LTR MaLR -16 572 330 225 265 29 0 chr5 106851858 106851926 -96233606 - MLT1K LTR MaLR -514 74 5 876 343 35 0 chr5 106851931 106852249 -96233283 + L3 LINE CR1 1246 1574 -3 33 0 0 0 chr5 106852644 106852677 -96232855 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr5 106852791 106852826 -96232706 + AT_rich Low_complexity Low_complexity 1 35 0 287 360 30 0 chr5 106853935 106854035 -96231497 - L2 LINE L2 -540 2774 2672 272 269 160 32 chr5 106854946 106855102 -96230430 + L3 LINE CR1 707 882 -695 770 265 123 84 chr5 106855842 106856355 -96229177 + HAL1 LINE L1 845 1377 -1130 322 325 149 0 chr5 106856540 106856734 -96228798 + L1M4 LINE L1 3185 3407 -2739 252 175 32 16 chr5 106856734 106856797 -96228735 + L1MD3 LINE L1 7921 7984 -11 280 320 109 75 chr5 106856877 106857318 -96228214 + L2 LINE L2 2813 3268 -4 201 39 0 0 chr5 106857742 106857768 -96227764 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 210 118 0 0 chr5 106858763 106858797 -96226735 + (GA)n Simple_repeat Simple_repeat 2 35 0 22 70 0 0 chr5 106858887 106858930 -96226602 + AT_rich Low_complexity Low_complexity 1 43 0 210 191 0 0 chr5 106860911 106860958 -96224574 + A-rich Low_complexity Low_complexity 1 47 0 629 177 133 13 chr5 106862711 106862869 -96222663 + MER69A DNA AcHobo 1 177 0 264 240 93 93 chr5 106862914 106863097 -96222435 + MER5A DNA MER1_type 7 189 0 800 193 7 0 chr5 106863270 106863405 -96222127 - AluJo SINE Alu -176 136 1 198 250 0 0 chr5 106863859 106863899 -96221633 + MIR SINE MIR 80 119 -143 776 271 39 28 chr5 106863926 106864181 -96221351 + MIR SINE MIR 2 259 -3 1720 190 96 98 chr5 106864221 106864763 -96220769 - MLT1F LTR MaLR 0 542 2 180 0 0 0 chr5 106864803 106864823 -96220709 + (T)n Simple_repeat Simple_repeat 1 20 0 243 294 102 76 chr5 106866406 106866603 -96218929 - L2 LINE L2 -54 3218 3017 2192 101 3 25 chr5 106866878 106867195 -96218337 + AluSp SINE Alu 1 310 -3 3875 87 15 32 chr5 106867454 106868043 -96217489 + L1PB2 LINE L1 5572 6150 -1 1967 126 14 0 chr5 106868073 106868358 -96217174 + AluJo SINE Alu 5 293 -19 222 326 32 32 chr5 106868781 106868876 -96216656 - MIR3 SINE MIR -7 201 107 829 231 148 0 chr5 106869508 106869711 -96215821 - MIR SINE MIR -19 243 11 424 292 79 22 chr5 106873008 106873186 -96212346 - MIR SINE MIR 0 262 75 29 0 0 0 chr5 106873543 106873572 -96211960 + AT_rich Low_complexity Low_complexity 1 29 0 2618 61 0 0 chr5 106873627 106873938 -96211594 - AluY SINE Alu 0 311 1 486 276 66 56 chr5 106874060 106874256 -96211276 + MIR SINE MIR 51 248 -14 468 307 106 21 chr5 106874496 106874685 -96210847 + MIR SINE MIR 20 224 -38 890 149 156 0 chr5 106876118 106876272 -96209260 - MER45A DNA AcHobo 0 178 1 808 191 0 6 chr5 106876302 106876464 -96209068 + MER96B DNA MER1_type? 10 170 -247 26 0 0 0 chr5 106876683 106876709 -96208823 + AT_rich Low_complexity Low_complexity 1 26 0 558 148 99 10 chr5 106876709 106876810 -96208722 - FLAM_A SINE Alu -6 136 27 1828 166 3 0 chr5 106877770 106878066 -96207466 - AluSx SINE Alu -15 297 1 789 200 23 0 chr5 106878888 106879018 -96206514 - FLAM_A SINE Alu 0 133 1 1547 138 22 3 chr5 106879483 106879924 -96205608 - LTR54 LTR ERV1 0 510 2 544 291 77 42 chr5 106880127 106880411 -96205121 - L1MC4a LINE L1 -152 5969 5674 955 133 0 15 chr5 106883987 106884122 -96201410 - FLAM_C SINE Alu 0 133 1 25 0 0 0 chr5 106884580 106884605 -96200927 + AT_rich Low_complexity Low_complexity 1 25 0 227 319 28 0 chr5 106885309 106885381 -96200151 - Charlie4 DNA MER1_type -4 1957 1884 952 201 29 6 chr5 106886278 106886452 -96199080 + MER5B DNA MER1_type 1 178 0 384 276 86 20 chr5 106886722 106886874 -96198658 + MER5A DNA MER1_type 28 189 0 2407 128 19 30 chr5 106888334 106888702 -96196830 - THE1B LTR MaLR 0 364 1 246 281 21 42 chr5 106889131 106889227 -96196305 + MARNA DNA Mariner 128 221 -365 950 262 130 65 chr5 106889401 106889909 -96195623 - MLT1K LTR MaLR -4 584 44 180 281 35 35 chr5 106889920 106889977 -96195555 + L3b LINE CR1 1416 1472 -111 587 268 115 21 chr5 106890072 106890307 -96195225 + MARNA DNA Mariner 322 578 -8 309 114 57 11 chr5 106891386 106891448 -96194084 + (TA)n Simple_repeat Simple_repeat 1 70 -22 2279 115 56 14 chr5 106891448 106891805 -96193727 + THE1C LTR MaLR 4 375 0 309 114 57 11 chr5 106891805 106891830 -96193702 + (TA)n Simple_repeat Simple_repeat 70 92 0 1906 180 39 65 chr5 106891835 106892453 -96193079 + pTR5 LTR ERV1 744 1345 -1093 3672 119 276 23 chr5 106892468 106893124 -96192408 + LTR12 LTR ERV1 5 826 0 303 312 126 47 chr5 106893884 106893931 -96191601 + L1MC4a LINE L1 5446 5488 -2320 2295 75 0 0 chr5 106893931 106894210 -96191322 + AluY SINE Alu 18 296 -15 303 312 126 47 chr5 106894210 106894480 -96191052 + L1MC4a LINE L1 5488 5804 -2004 1104 142 206 53 chr5 106894480 106894761 -96190771 + MER33 DNA MER1_type 1 324 0 303 312 126 47 chr5 106894761 106894846 -96190686 + L1MC4a LINE L1 5804 5881 -1927 420 228 18 53 chr5 106895701 106895815 -96189717 - MER34 LTR ERV1 0 542 433 270 259 0 0 chr5 106895896 106895950 -96189582 - MER34 LTR ERV1 -124 418 365 275 136 0 0 chr5 106896209 106896253 -96189279 + MADE1 DNA Mariner 1 44 -36 840 84 0 76 chr5 106896289 106896420 -96189112 - L1MA3 LINE L1 0 6305 6185 705 154 146 0 chr5 106896556 106896679 -96188853 - FAM SINE Alu -44 141 1 288 0 0 0 chr5 106896976 106897008 -96188524 + (CA)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr5 106897008 106897030 -96188502 + (A)n Simple_repeat Simple_repeat 1 22 0 3079 125 9 2 chr5 106897556 106897987 -96187545 - MER57B LTR ERV1 0 434 1 2465 116 165 54 chr5 106899008 106899639 -96185893 + Tigger3(Golem) DNA MER2_type 1 3029 0 1841 174 27 0 chr5 106899995 106900294 -96185238 - AluJb SINE Alu -5 307 1 689 221 32 17 chr5 106901178 106901350 -96184182 - MIR SINE MIR -25 237 63 545 264 157 6 chr5 106901404 106901563 -96183969 - MER5A DNA MER1_type 0 189 7 425 288 104 34 chr5 106902129 106902329 -96183203 - MIR SINE MIR -32 230 20 339 298 0 11 chr5 106902373 106902467 -96183065 + MIR SINE MIR 34 126 -136 260 330 37 69 chr5 106902492 106902680 -96182852 - L2 LINE L2 -218 3054 2873 201 309 95 48 chr5 106902690 106902816 -96182716 + L2 LINE L2 3182 3313 0 1452 193 68 34 chr5 106902884 106903206 -96182326 - MLT1A2 LTR MaLR -37 337 5 2457 50 0 3 chr5 106903276 106903575 -96181957 - AluY SINE Alu -10 301 4 4324 181 57 21 chr5 106903891 106904687 -96180845 - LTR1B LTR ERV1 0 826 3 1017 277 127 16 chr5 106905699 106906085 -96179447 + L2 LINE L2 2883 3311 -2 2644 128 10 12 chr5 106906161 106906474 -96179058 - MER57A LTR ERV1 -4 399 86 2516 144 36 0 chr5 106906474 106906863 -96178669 + MER57A LTR ERV1 1 403 0 2644 128 10 12 chr5 106906863 106906949 -96178583 - MER57A LTR ERV1 -317 86 1 1991 146 0 16 chr5 106907398 106907713 -96177819 + AluJo SINE Alu 1 310 -2 484 281 0 0 chr5 106907856 106907970 -96177562 - MER5B DNA MER1_type 0 178 65 442 257 46 105 chr5 106908087 106908368 -96177164 + L1MEc LINE L1 812 1009 -5196 1727 176 10 17 chr5 106908368 106908669 -96176863 - AluJb SINE Alu -1 311 13 442 257 46 105 chr5 106908669 106908760 -96176772 + L1MEc LINE L1 1009 1104 -5101 2278 157 82 3 chr5 106908766 106909154 -96176378 - MSTB LTR MaLR -7 419 1 330 26 0 0 chr5 106910539 106910578 -96174954 + (T)n Simple_repeat Simple_repeat 1 39 0 201 129 0 0 chr5 106912542 106912573 -96172959 + (C)n Simple_repeat Simple_repeat 1 31 0 2410 83 0 3 chr5 106913138 106913438 -96172094 - AluSq SINE Alu -14 299 1 290 263 13 0 chr5 106914463 106914539 -96170993 + MER103 DNA DNA 84 160 -6 429 270 51 56 chr5 106916134 106916312 -96169220 + Charlie8 DNA MER1_type 2 178 -2239 352 309 171 8 chr5 106916571 106916823 -96168709 + L1MEd LINE L1 359 651 -5468 424 284 21 7 chr5 106916825 106916966 -96168566 + L1MEd LINE L1 2671 2813 -3316 16925 146 53 7 chr5 106916989 106920201 -96165331 + L1PB1 LINE L1 1 3360 -3502 303 254 0 0 chr5 106921077 106921215 -96164317 + GA-rich Low_complexity Low_complexity 1 138 0 11961 179 17 15 chr5 106922940 106926190 -96159342 + L1PB1 LINE L1 3343 6592 -275 1154 177 0 0 chr5 106927577 106927752 -96157780 + FAM SINE Alu 1 175 0 1777 197 82 25 chr5 106929011 106929489 -96156043 - MLT1D LTR MaLR 0 505 1 230 302 0 0 chr5 106929679 106929742 -96155790 - MER112 DNA MER1_type -12 248 186 202 318 30 0 chr5 106930082 106930148 -96155384 + L2 LINE L2 3245 3312 -1 508 207 45 18 chr5 106930312 106930423 -96155109 + MER81 DNA DNA 1 114 0 1047 250 4 13 chr5 106930895 106931131 -96154401 + Charlie1a DNA MER1_type 17 250 -1205 441 185 74 9 chr5 106931156 106931264 -96154268 - L1M4 LINE L1 -6090 452 338 1248 204 35 11 chr5 106931283 106931543 -96153989 - L1M4 LINE L1 -6275 267 2 2143 115 0 7 chr5 106931617 106931921 -96153611 - AluSq SINE Alu -11 302 1 561 68 0 0 chr5 106932638 106932712 -96152820 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 218 232 36 18 chr5 106934743 106934799 -96150733 + L2 LINE L2 3253 3309 -4 1874 151 0 46 chr5 106935668 106935993 -96149539 + AluJo SINE Alu 2 311 -1 3483 101 126 22 chr5 106936082 106936726 -96148806 - Tigger3(Golem) DNA MER2_type -41 2988 2278 385 167 0 0 chr5 106936718 106936778 -96148754 - Tigger3(Golem) DNA MER2_type -2921 108 49 * 197 271 0 71 chr5 106937320 106937390 -96148142 + MIR3 SINE MIR 128 192 -16 403 248 47 23 chr5 106937946 106938075 -96147457 - MIR SINE MIR -32 230 99 366 348 44 0 chr5 106938384 106938542 -96146990 + Tigger8 DNA MER2_type 11 175 -491 403 301 67 16 chr5 106938707 106938900 -96146632 + Tigger8 DNA MER2_type 408 610 -56 749 185 16 54 chr5 106939781 106939965 -96145567 + MER20 DNA MER1_type 31 207 -12 222 189 0 0 chr5 106941004 106941041 -96144491 + polypurine Low_complexity Low_complexity 2 38 0 211 308 0 13 chr5 106942625 106942703 -96142829 + (TA)n Simple_repeat Simple_repeat 2 78 0 21 36 0 0 chr5 106942882 106942910 -96142622 + AT_rich Low_complexity Low_complexity 1 28 0 180 97 0 0 chr5 106943198 106943229 -96142303 + (A)n Simple_repeat Simple_repeat 1 31 0 2067 131 27 0 chr5 106945715 106946013 -96139519 - AluSx SINE Alu -6 306 1 446 0 0 18 chr5 106946946 106947001 -96138531 + (CA)n Simple_repeat Simple_repeat 1 54 0 186 43 0 0 chr5 106947000 106947023 -96138509 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 46 19 0 0 chr5 106947469 106947522 -96138010 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 106948314 106948335 -96137197 + AT_rich Low_complexity Low_complexity 1 21 0 2458 82 0 0 chr5 106950245 106950550 -96134982 - AluY SINE Alu -6 305 1 456 231 279 43 chr5 106951438 106951646 -96133886 - MIR SINE MIR -5 257 1 230 250 24 0 chr5 106951703 106951787 -96133745 + L1ME LINE L1 5732 5817 -304 225 132 0 0 chr5 106951927 106951965 -96133567 + (TATG)n Simple_repeat Simple_repeat 3 40 0 204 244 0 122 chr5 106953520 106953602 -96131930 - L3 LINE CR1 -14 1563 1492 4096 138 45 9 chr5 106953706 106954068 -96131464 + L1MB2 LINE L1 5443 5791 -380 2217 131 0 0 chr5 106954068 106954380 -96131152 + AluSx SINE Alu 1 312 0 4096 138 45 9 chr5 106954380 106954714 -96130818 + L1MB2 LINE L1 5791 6164 -7 2130 32 0 0 chr5 106954733 106954985 -96130547 + L1PA3 LINE L1 5904 6155 0 2032 139 10 0 chr5 106955393 106955702 -96129830 + AluSx SINE Alu 1 312 0 448 239 72 75 chr5 106956242 106956548 -96128984 - L1MC4 LINE L1 0 8042 7738 2305 91 3 3 chr5 106956803 106957101 -96128431 - AluY SINE Alu -13 298 1 28 0 0 0 chr5 106958218 106958246 -96127286 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 106958463 106958489 -96127043 + AT_rich Low_complexity Low_complexity 1 26 0 1636 219 114 17 chr5 106959476 106959897 -96125635 + MLT1C LTR MaLR 6 467 0 1286 255 71 15 chr5 106959943 106960722 -96124810 + L1ME LINE L1 4899 5761 -409 500 297 162 5 chr5 106961091 106961276 -96124256 + MIR SINE MIR 31 244 -18 253 274 16 0 chr5 106961302 106961364 -96124168 - L2 LINE L2 -2 3270 3208 552 43 0 0 chr5 106961652 106961721 -96123811 + L1PA5 LINE L1 6081 6149 -5 185 328 0 0 chr5 106961727 106961785 -96123747 - MIR3 SINE MIR -41 167 110 21 36 0 0 chr5 106962989 106963017 -96122515 + AT_rich Low_complexity Low_complexity 1 28 0 539 301 37 105 chr5 106964139 106964491 -96121041 - L2 LINE L2 -3 3269 2942 310 266 168 0 chr5 106965005 106965118 -96120414 + L2 LINE L2 3174 3305 -8 21 0 0 0 chr5 106965192 106965213 -96120319 + AT_rich Low_complexity Low_complexity 1 21 0 1778 162 10 32 chr5 106966092 106966406 -96119126 + AluJo SINE Alu 1 307 -5 223 191 24 0 chr5 106967408 106967450 -96118082 + GA-rich Low_complexity Low_complexity 2 44 0 22 56 0 0 chr5 106967641 106967677 -96117855 + AT_rich Low_complexity Low_complexity 1 36 0 552 284 52 48 chr5 106968339 106968568 -96116964 - L2 LINE L2 -187 3085 2856 2380 53 42 0 chr5 106968674 106968959 -96116573 + AluY SINE Alu 5 301 -10 2165 141 0 3 chr5 106968970 106969283 -96116249 + AluJo SINE Alu 1 312 0 822 253 65 4 chr5 106970103 106970348 -96115184 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 106971232 106971253 -96114279 + AT_rich Low_complexity Low_complexity 1 21 0 35 78 0 0 chr5 106971553 106971630 -96113902 + AT_rich Low_complexity Low_complexity 1 77 0 2260 117 3 0 chr5 106973087 106973387 -96112145 - AluSg SINE Alu -7 303 3 226 323 0 0 chr5 106973434 106973499 -96112033 - Charlie8 DNA MER1_type -1003 1414 1350 229 267 50 0 chr5 106974982 106975042 -96110490 + L2 LINE L2 3247 3309 -4 3371 257 108 38 chr5 106975173 106975456 -96110076 + L2 LINE L2 1597 1859 -1455 2195 99 3 0 chr5 106975456 106975764 -96109768 - AluSq SINE Alu 0 309 1 3371 257 108 38 chr5 106975764 106976726 -96108806 + L2 LINE L2 1859 2931 -383 3293 151 49 0 chr5 106976759 106977289 -96108243 - MER68 LTR ERV1 -6 556 1 830 298 73 30 chr5 106977289 106977658 -96107874 + L2 LINE L2 2929 3313 0 186 196 109 0 chr5 106978109 106978155 -96107377 + L2 LINE L2 2319 2369 -945 342 352 111 34 chr5 106978302 106978680 -96106852 + L2 LINE L2 2554 2960 -354 218 333 160 20 chr5 106980391 106980541 -96104991 - L3 LINE CR1 -1 1576 1406 21 36 0 0 chr5 106980882 106980910 -96104622 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr5 106981408 106981445 -96104087 + AT_rich Low_complexity Low_complexity 1 37 0 1732 166 27 14 chr5 106981800 106982095 -96103437 + AluJo SINE Alu 1 299 -13 2121 128 0 0 chr5 106982506 106982794 -96102738 - AluSc SINE Alu -21 288 1 427 270 70 0 chr5 106983321 106983436 -96102096 + MIR SINE MIR 60 182 -80 3023 88 3 10 chr5 106985841 106986706 -96098826 + L1PB1 LINE L1 5181 6147 -4 822 220 122 14 chr5 106986872 106987086 -96098446 + MIR SINE MIR 26 262 0 512 91 80 4 chr5 106988177 106988404 -96097128 + (TA)n Simple_repeat Simple_repeat 1 244 0 280 302 62 21 chr5 106988407 106988503 -96097029 - MIR SINE MIR -148 114 15 217 225 0 0 chr5 106988580 106988620 -96096912 + (CA)n Simple_repeat Simple_repeat 1 40 0 1282 161 53 86 chr5 106988721 106989013 -96096519 + AluJo SINE Alu 13 296 -16 1951 106 7 7 chr5 106989013 106989296 -96096236 + AluSg SINE Alu 28 310 0 1282 161 53 86 chr5 106989296 106989307 -96096225 + AluJo SINE Alu 296 306 -6 215 229 49 16 chr5 106989445 106989506 -96096026 + GA-rich Low_complexity Low_complexity 2 64 0 207 275 25 38 chr5 106989613 106989693 -96095839 - L2 LINE L2 -188 3084 3006 728 168 7 14 chr5 106990535 106990678 -96094854 + MER3 DNA MER1_type 52 193 -16 25 31 0 0 chr5 106992251 106992283 -96093249 + AT_rich Low_complexity Low_complexity 1 32 0 4870 61 41 5 chr5 106992894 106993531 -96092001 + PABL_A LTR ERV1 1 660 0 2120 127 0 3 chr5 106993880 106994180 -96091352 + AluSx SINE Alu 3 301 -11 287 293 103 60 chr5 106994426 106994542 -96090990 + MIR3 SINE MIR 15 135 -73 24 0 0 0 chr5 106994622 106994646 -96090886 + AT_rich Low_complexity Low_complexity 1 24 0 640 323 52 12 chr5 106995392 106995643 -96089889 + MIR SINE MIR 2 262 0 23 0 0 0 chr5 106996686 106996709 -96088823 + AT_rich Low_complexity Low_complexity 1 23 0 906 304 59 4 chr5 106998799 106999072 -96086460 + MER115 DNA AcHobo 29 316 -377 422 303 65 49 chr5 106999542 106999727 -96085805 - MIR SINE MIR -55 207 20 302 252 304 0 chr5 106999992 107000127 -96085405 + MER5A DNA MER1_type 14 189 0 26 0 0 0 chr5 107000859 107000885 -96084647 + AT_rich Low_complexity Low_complexity 1 26 0 956 199 114 27 chr5 107001764 107002061 -96083471 + MER5C DNA MER1_type 2 324 0 202 313 70 79 chr5 107002079 107002306 -96083226 - L2 LINE L2 -693 2621 2397 348 248 204 9 chr5 107002450 107002563 -96082969 + MIR SINE MIR 52 186 -76 450 315 182 48 chr5 107002566 107003416 -96082116 - L2 LINE L2 -1029 2285 1322 1422 165 4 4 chr5 107003877 107004114 -96081418 + MER2 DNA MER2_type 1 237 -108 230 327 136 9 chr5 107004837 107005051 -96080481 + L1MEc LINE L1 464 704 -6121 228 309 32 32 chr5 107005186 107005374 -96080158 + L1MEc LINE L1 936 1123 -5702 1883 255 115 44 chr5 107005580 107006239 -96079293 + L1MEc LINE L1 1044 1654 -4990 351 0 0 0 chr5 107006239 107006278 -96079254 + (CA)n Simple_repeat Simple_repeat 2 40 0 1883 255 115 44 chr5 107006278 107007506 -96078026 + L1MEc LINE L1 1654 3316 -3328 192 77 0 0 chr5 107007506 107007532 -96078000 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1883 255 115 44 chr5 107007532 107007927 -96077605 + L1MEc LINE L1 3316 3681 -2963 802 183 0 0 chr5 107010194 107010325 -96075207 + FLAM_C SINE Alu 2 132 -1 248 231 51 39 chr5 107010999 107011077 -96074455 - MIR SINE MIR -66 196 118 405 0 0 0 chr5 107011142 107011187 -96074345 + (CA)n Simple_repeat Simple_repeat 2 46 0 1626 199 0 11 chr5 107011195 107011481 -96074051 - AluJo SINE Alu -29 283 1 21 89 0 0 chr5 107012126 107012182 -96073350 + AT_rich Low_complexity Low_complexity 1 56 0 355 138 50 38 chr5 107012488 107012568 -96072964 - L1MA4 LINE L1 -194 6106 6026 1174 116 26 0 chr5 107012568 107012753 -96072779 + L1MA4 LINE L1 6101 6295 -5 449 232 209 8 chr5 107012972 107013235 -96072297 + L1ME4a LINE L1 5581 5896 -225 34 42 0 0 chr5 107013321 107013369 -96072163 + AT_rich Low_complexity Low_complexity 1 48 0 2024 162 19 36 chr5 107013515 107013935 -96071597 + L1MA6 LINE L1 5883 6295 -5 1018 289 63 43 chr5 107013982 107014428 -96071104 + MLT1H LTR MaLR 83 537 -12 703 102 0 0 chr5 107014939 107015037 -96070495 + HY3 scRNA scRNA 2 99 -2 243 125 0 0 chr5 107015038 107015078 -96070454 + (A)n Simple_repeat Simple_repeat 1 40 0 770 198 176 5 chr5 107015084 107015271 -96070261 + MIR SINE MIR 31 249 -13 287 232 205 21 chr5 107015308 107015426 -96070106 - MIR SINE MIR -54 154 28 806 148 111 26 chr5 107015902 107016091 -96069441 - MER2 DNA MER2_type -137 208 4 23 0 0 0 chr5 107016301 107016324 -96069208 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 107017403 107017425 -96068107 + AT_rich Low_complexity Low_complexity 1 22 0 2404 97 3 0 chr5 107017458 107017768 -96067764 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr5 107018294 107018323 -96067209 + AT_rich Low_complexity Low_complexity 1 29 0 1436 185 97 27 chr5 107018534 107018610 -96066922 + MLT1D LTR MaLR 107 176 -329 2003 101 11 0 chr5 107018610 107018878 -96066654 + AluSc SINE Alu 39 309 0 1436 185 97 27 chr5 107018878 107019174 -96066358 + MLT1D LTR MaLR 176 505 0 1762 240 128 36 chr5 107019713 107019843 -96065689 + L1ME1 LINE L1 331 448 -5632 1913 179 54 54 chr5 107019843 107020346 -96065186 - MLT1D LTR MaLR -2 503 1 1762 240 128 36 chr5 107020346 107021171 -96064361 + L1ME1 LINE L1 448 1339 -4741 1365 135 0 5 chr5 107021171 107021378 -96064154 - AluSg/x SINE Alu -23 289 84 1833 211 113 59 chr5 107021508 107022057 -96063475 + L1ME1 LINE L1 5188 5777 -323 2174 118 0 13 chr5 107022057 107022363 -96063169 - AluSx SINE Alu -10 302 1 1833 211 113 59 chr5 107022363 107022453 -96063079 + L1ME1 LINE L1 5777 5861 -239 2680 36 0 0 chr5 107022622 107022931 -96062601 + AluY SINE Alu 1 309 -2 1017 116 0 0 chr5 107022931 107023086 -96062446 + (TA)n Simple_repeat Simple_repeat 1 155 0 189 0 0 0 chr5 107023085 107023106 -96062426 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 2154 177 81 15 chr5 107025261 107025741 -96059791 + Charlie1b DNA MER1_type 6 517 -6 1477 233 3 40 chr5 107026120 107026149 -96059383 + MLT1B LTR MaLR 28 57 -333 2371 48 3 48 chr5 107026149 107026458 -96059074 + AluY SINE Alu 2 296 -15 1477 233 3 40 chr5 107026458 107026805 -96058727 + MLT1B LTR MaLR 57 390 0 181 394 0 0 chr5 107027574 107027640 -96057892 + L2 LINE L2 3188 3253 -19 180 111 0 0 chr5 107027764 107027791 -96057741 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 191 235 0 98 chr5 107027891 107027942 -96057590 - L2 LINE L2 -16 3256 3211 1897 129 52 89 chr5 107028140 107028489 -96057043 - MER1B DNA MER1_type -1 336 1 228 287 117 21 chr5 107028753 107028847 -96056685 - MIR SINE MIR -159 103 1 2352 96 0 0 chr5 107029288 107029591 -96055941 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr5 107029967 107029990 -96055542 + AT_rich Low_complexity Low_complexity 1 23 0 4246 124 18 117 chr5 107031879 107032281 -96053251 + MER4D LTR ERV1 1 441 -462 1732 157 13 46 chr5 107032281 107032587 -96052945 - AluJo SINE Alu -11 301 6 4246 124 18 117 chr5 107032587 107032848 -96052684 + MER4D LTR ERV1 441 578 -325 2098 124 3 10 chr5 107032848 107033147 -96052385 + AluSx SINE Alu 12 308 -4 4246 124 18 117 chr5 107033147 107033444 -96052088 + MER4D LTR ERV1 578 903 0 1672 152 42 0 chr5 107034125 107034389 -96051143 + AluJb SINE Alu 5 279 -33 1745 67 0 0 chr5 107034823 107035033 -96050499 - L1PA5 LINE L1 -2 6152 5943 2276 86 3 17 chr5 107035036 107035337 -96050195 - AluSx SINE Alu -15 297 1 35 0 0 0 chr5 107036211 107036246 -96049286 + AT_rich Low_complexity Low_complexity 1 35 0 3321 124 25 27 chr5 107036330 107036852 -96048680 + MER1A DNA MER1_type 9 529 0 180 343 104 8 chr5 107036963 107037097 -96048435 + MIR SINE MIR 85 231 -31 2277 99 24 0 chr5 107038199 107038493 -96047039 + AluSx SINE Alu 1 301 -11 199 250 62 0 chr5 107038529 107038577 -96046955 + MER5A DNA MER1_type 88 138 -51 200 289 116 65 chr5 107042022 107042496 -96043036 - L2 LINE L2 -1 3312 2815 198 279 16 16 chr5 107043246 107043307 -96042225 + L2 LINE L2 2728 2788 -526 769 287 108 29 chr5 107043334 107043752 -96041780 + L2 LINE L2 2863 3313 0 1269 82 0 101 chr5 107044418 107044626 -96040906 + AluSg/x SINE Alu 120 306 -6 238 284 97 45 chr5 107045149 107045283 -96040249 - MIR3 SINE MIR -43 165 25 422 315 84 14 chr5 107045848 107046232 -96039300 - MLT1L LTR MaLR -6 609 158 3047 112 164 35 chr5 107046232 107046382 -96039150 + LTR35 LTR ERV1 1 130 -488 1793 191 0 0 chr5 107046382 107046681 -96038851 + AluJo SINE Alu 1 299 -13 3047 112 164 35 chr5 107046681 107047077 -96038455 + LTR35 LTR ERV1 130 618 0 4593 127 75 1 chr5 107047204 107047873 -96037659 - MER72 LTR ERV1 0 722 5 24 32 0 0 chr5 107048011 107048042 -96037490 + AT_rich Low_complexity Low_complexity 1 31 0 764 134 0 0 chr5 107048071 107048183 -96037349 - MER4E LTR ERV1 0 779 668 786 177 6 116 chr5 107048185 107048366 -96037166 + AluSg/x SINE Alu 152 312 0 386 95 32 0 chr5 107048368 107048431 -96037101 + GA-rich Low_complexity Low_complexity 3 67 0 3622 162 69 5 chr5 107048482 107049150 -96036382 - MER50 LTR ERV1 -23 711 1 769 263 6 6 chr5 107049150 107049321 -96036211 - MLT1C LTR MaLR -12 455 285 1450 137 14 0 chr5 107049350 107049569 -96035963 - MLT1C LTR MaLR -245 222 1 4613 163 12 70 chr5 107049618 107049650 -96035882 + L1MB8 LINE L1 5171 5203 -975 1635 155 68 4 chr5 107049650 107049938 -96035594 + AluSx SINE Alu 1 305 0 4613 163 12 70 chr5 107049938 107050075 -96035457 + L1MB8 LINE L1 5203 5346 -832 2356 57 0 0 chr5 107050075 107050354 -96035178 + AluY SINE Alu 23 301 -10 4613 163 12 70 chr5 107050354 107050722 -96034810 + L1MB8 LINE L1 5346 5734 -444 1916 146 4 0 chr5 107050722 107051027 -96034505 + AluJb SINE Alu 1 306 0 4613 163 12 70 chr5 107051027 107051551 -96033981 + L1MB8 LINE L1 5734 6175 -3 2306 91 13 0 chr5 107051628 107051926 -96033606 + AluY SINE Alu 1 302 -9 405 308 68 14 chr5 107052160 107052306 -96033226 - MER5A DNA MER1_type -10 179 26 763 242 103 9 chr5 107052416 107052639 -96032893 + MIR SINE MIR 19 262 0 2162 104 10 13 chr5 107052940 107053239 -96032293 + AluSq SINE Alu 1 298 -15 2463 80 0 0 chr5 107054114 107054425 -96031107 - AluY SINE Alu 0 311 1 1419 196 53 20 chr5 107054569 107054870 -96030662 + AluJo SINE Alu 1 311 -1 2510 58 0 0 chr5 107055506 107055814 -96029718 - AluY SINE Alu -3 308 1 405 256 97 11 chr5 107056452 107056628 -96028904 + L1MEd LINE L1 10 200 -5919 1738 146 27 10 chr5 107057509 107057803 -96027729 - AluJb SINE Alu -13 299 1 21 36 0 0 chr5 107058128 107058156 -96027376 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr5 107059876 107059896 -96025636 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 2493 81 0 0 chr5 107059898 107060208 -96025324 - AluY SINE Alu -1 310 1 1610 176 30 3 chr5 107060412 107060536 -96024996 + AluJb SINE Alu 1 120 -192 180 0 0 0 chr5 107060536 107060556 -96024976 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1610 176 30 3 chr5 107060556 107060726 -96024806 + AluJb SINE Alu 120 303 -9 299 300 70 0 chr5 107060885 107060985 -96024547 - MIR SINE MIR -62 146 40 2337 57 0 24 chr5 107061075 107061372 -96024160 + AluY SINE Alu 11 300 -11 2323 113 0 0 chr5 107061577 107061887 -96023645 - AluSg SINE Alu 0 310 1 221 291 0 0 chr5 107061895 107061950 -96023582 + MIR SINE MIR 51 105 -157 338 149 26 79 chr5 107062420 107062519 -96023013 - Charlie7 DNA MER1_type 0 2612 2518 2233 100 0 16 chr5 107062519 107062829 -96022703 + AluSp SINE Alu 1 305 -8 338 149 26 79 chr5 107062829 107062843 -96022689 - Charlie7 DNA MER1_type -94 2518 2505 41 72 0 0 chr5 107062872 107062955 -96022577 + AT_rich Low_complexity Low_complexity 1 83 0 180 0 0 0 chr5 107063659 107063679 -96021853 + (TG)n Simple_repeat Simple_repeat 1 20 0 180 77 0 0 chr5 107063679 107063705 -96021827 + (GA)n Simple_repeat Simple_repeat 2 27 0 2517 48 6 6 chr5 107065609 107065920 -96019612 - AluY SINE Alu 0 311 1 1598 167 75 10 chr5 107065931 107066224 -96019308 - AluJb SINE Alu 0 312 1 21 0 0 0 chr5 107066315 107066336 -96019196 + AT_rich Low_complexity Low_complexity 1 21 0 393 296 126 10 chr5 107066558 107066764 -96018768 - MIR SINE MIR -28 234 5 306 237 13 13 chr5 107066887 107066963 -96018569 + L2 LINE L2 3197 3272 -41 2012 152 3 0 chr5 107067547 107067844 -96017688 - AluSx SINE Alu -14 298 1 935 223 15 5 chr5 107068990 107069187 -96016345 + MIR SINE MIR 52 250 -12 2265 105 0 3 chr5 107069932 107070228 -96015304 - AluSq SINE Alu -18 295 1 2199 87 14 0 chr5 107070769 107071074 -96014458 - AluSq SINE Alu 0 313 5 1782 135 0 4 chr5 107071262 107071521 -96014011 + AluJo SINE Alu 3 260 -52 393 188 0 0 chr5 107071553 107071633 -96013899 + GA-rich Low_complexity Low_complexity 2 81 0 190 220 60 0 chr5 107071645 107071695 -96013837 + MIR SINE MIR 1 53 -209 726 189 31 0 chr5 107071755 107071882 -96013650 + FLAM_C SINE Alu 3 133 0 1689 166 78 0 chr5 107071942 107072226 -96013306 - AluSx SINE Alu -6 306 1 328 306 104 33 chr5 107072701 107072884 -96012648 - MIR SINE MIR -2 260 65 512 270 112 49 chr5 107073838 107074105 -96011427 - MER102a DNA MER1_type -2 328 45 498 287 66 36 chr5 107074993 107075160 -96010372 - MIR SINE MIR -78 184 13 275 24 0 49 chr5 107076618 107076659 -96008873 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1871 135 50 7 chr5 107076863 107077144 -96008388 + AluSx SINE Alu 1 293 -19 251 321 130 14 chr5 107078586 107078727 -96006805 + MIR SINE MIR 28 140 -68 1727 127 62 49 chr5 107079060 107079368 -96006164 - AluSx SINE Alu 0 312 1 1996 141 3 0 chr5 107079591 107079913 -96005619 - AluSx SINE Alu 0 312 1 28 0 0 0 chr5 107080101 107080129 -96005403 + AT_rich Low_complexity Low_complexity 1 28 0 194 328 23 70 chr5 107080433 107080561 -96004971 - L2 LINE L2 -235 3037 2916 200 333 85 26 chr5 107081769 107081922 -96003610 - MIR SINE MIR -71 191 30 22 35 0 0 chr5 107083160 107083189 -96002343 + AT_rich Low_complexity Low_complexity 1 29 0 334 347 201 8 chr5 107083621 107084090 -96001442 - L2 LINE L2 0 3272 2718 542 240 136 0 chr5 107084759 107084913 -96000619 - MIR SINE MIR -2 260 86 377 85 0 17 chr5 107086233 107086292 -95999240 + (TG)n Simple_repeat Simple_repeat 2 59 0 358 225 0 0 chr5 107086302 107086391 -95999141 - L1MC4 LINE L1 -1340 6702 6614 265 250 23 0 chr5 107086313 107086401 -95999131 + L1MC4 LINE L1 6614 6703 -1339 * 234 130 0 0 chr5 107086423 107086469 -95999063 + LTR66 LTR ERVL 394 439 -171 2226 129 18 6 chr5 107087319 107087651 -95997881 + MER1B DNA MER1_type 1 336 -1 309 51 0 0 chr5 107087961 107088000 -95997532 + (TG)n Simple_repeat Simple_repeat 2 40 0 605 312 102 0 chr5 107089286 107089501 -95996031 - MIR SINE MIR -8 254 18 2296 100 7 0 chr5 107089675 107089984 -95995548 - AluSq SINE Alu -2 311 1 2257 112 3 0 chr5 107090229 107090524 -95995008 + AluSx SINE Alu 2 297 -15 29 0 0 0 chr5 107090590 107090619 -95994913 + AT_rich Low_complexity Low_complexity 1 29 0 303 203 0 0 chr5 107090689 107090753 -95994779 + (TATG)n Simple_repeat Simple_repeat 2 65 0 228 286 25 17 chr5 107090809 107090928 -95994604 + L1ME4a LINE L1 5946 6065 -56 257 378 8 8 chr5 107091664 107091783 -95993749 - MIR SINE MIR -122 140 22 1592 128 0 13 chr5 107093041 107093275 -95992257 + AluSg/x SINE Alu 73 303 -7 268 314 47 12 chr5 107093315 107093401 -95992131 + MER5A DNA MER1_type 40 128 -61 337 288 196 26 chr5 107093425 107093578 -95991954 + MER5A DNA MER1_type 11 189 0 432 0 0 0 chr5 107093745 107093793 -95991739 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 336 14 0 chr5 107094281 107094358 -95991174 - MIR SINE MIR -72 136 59 579 267 62 13 chr5 107094500 107094725 -95990807 - LTR16A1 LTR ERVL -55 402 167 686 267 75 63 chr5 107095815 107096309 -95989223 + MLT1J LTR MaLR 1 500 -11 1021 285 174 22 chr5 107096392 107097080 -95988452 + L2 LINE L2 2453 3296 -17 1546 159 76 21 chr5 107098581 107098870 -95986662 - AluJo SINE Alu -7 305 1 2199 126 7 0 chr5 107098873 107099182 -95986350 - AluSx SINE Alu -1 311 1 636 209 0 0 chr5 107099185 107099300 -95986232 - FLAM_A SINE Alu -12 130 16 609 283 53 35 chr5 107100122 107100348 -95985184 + MIR SINE MIR 29 258 -4 245 316 15 138 chr5 107100488 107100553 -95984979 - MIR3 SINE MIR -21 187 116 2176 126 0 0 chr5 107100553 107100855 -95984677 + AluSx SINE Alu 1 302 -10 245 316 15 138 chr5 107100855 107100985 -95984547 - MIR3 SINE MIR -92 116 16 2019 166 0 3 chr5 107102263 107102576 -95982956 - AluJb SINE Alu 0 312 1 186 296 108 72 chr5 107102638 107102861 -95982671 + L2 LINE L2 2581 2811 -503 780 145 0 0 chr5 107103619 107103750 -95981782 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 722 280 65 40 chr5 107103783 107104108 -95981424 + L2 LINE L2 2981 3313 0 206 31 0 31 chr5 107104118 107104150 -95981382 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 217 277 46 0 chr5 107104494 107104559 -95980973 + L2 LINE L2 3246 3313 0 2228 100 10 0 chr5 107104630 107104921 -95980611 - AluSx SINE Alu -18 294 1 1647 179 0 0 chr5 107105206 107105469 -95980063 - AluJb SINE Alu -6 306 44 581 160 0 0 chr5 107105469 107105563 -95979969 - AluSg/x SINE Alu -6 306 213 2226 246 45 36 chr5 107106383 107107156 -95978376 + L1MEc LINE L1 7 786 -5610 2224 184 68 4 chr5 107107172 107107644 -95977888 - MER90 LTR ERV1 -44 570 69 238 262 48 0 chr5 107107869 107107953 -95977579 - L1ME LINE L1 -5978 92 5 747 237 38 27 chr5 107109016 107109202 -95976330 + MER5A DNA MER1_type 1 188 -1 513 309 40 10 chr5 107109202 107109403 -95976129 + MIR SINE MIR 8 214 -48 367 216 274 0 chr5 107109465 107109594 -95975938 + MLT1G LTR MaLR 2 124 -431 470 219 38 38 chr5 107109649 107109718 -95975814 - MER63A DNA MER1_type -1513 175 107 2121 129 0 3 chr5 107109718 107110037 -95975495 - AluSx SINE Alu 0 318 1 470 219 38 38 chr5 107110037 107110126 -95975406 - MER63A DNA MER1_type -1580 108 16 860 245 83 29 chr5 107110150 107110497 -95975035 + MLT1G LTR MaLR 143 582 -8 2099 132 7 0 chr5 107110522 107110817 -95974715 + AluSx SINE Alu 1 297 -15 26 0 0 0 chr5 107113202 107113228 -95972304 + AT_rich Low_complexity Low_complexity 1 26 0 1754 159 10 38 chr5 107115540 107115829 -95969703 + AluJo SINE Alu 1 281 -31 595 260 136 38 chr5 107115998 107116233 -95969299 + MIR SINE MIR 5 262 0 369 322 47 0 chr5 107116892 107117041 -95968491 - LTR67 LTR ERVL -336 221 66 181 276 69 35 chr5 107117103 107117190 -95968342 + L2 LINE L2 2969 3058 -214 378 245 29 20 chr5 107117224 107117326 -95968206 + L2 LINE L2 3208 3310 -3 27 49 0 0 chr5 107117392 107117433 -95968099 + AT_rich Low_complexity Low_complexity 1 41 0 2066 105 36 0 chr5 107117475 107117777 -95967755 + AluSx SINE Alu 1 312 0 304 296 56 9 chr5 107118143 107118251 -95967281 - MIR SINE MIR -66 142 30 432 55 0 0 chr5 107118722 107118777 -95966755 + (TG)n Simple_repeat Simple_repeat 1 55 0 2025 108 73 0 chr5 107119332 107119620 -95965912 + AluSq SINE Alu 1 309 -4 696 276 12 12 chr5 107120126 107120296 -95965236 + MIR SINE MIR 5 174 -88 188 75 0 50 chr5 107120306 107120346 -95965186 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 850 251 36 112 chr5 107120363 107120782 -95964750 - L2 LINE L2 -5 3267 2881 270 0 0 0 chr5 107121433 107121463 -95964069 + (TC)n Simple_repeat Simple_repeat 2 31 0 2353 109 0 3 chr5 107121480 107121791 -95963741 - AluSg SINE Alu 0 310 1 409 215 56 37 chr5 107123575 107123682 -95961850 - MIR SINE MIR -38 224 116 26 64 0 0 chr5 107125632 107125679 -95959853 + AT_rich Low_complexity Low_complexity 1 47 0 192 77 0 0 chr5 107125735 107125761 -95959771 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 107126967 107126988 -95958544 + AT_rich Low_complexity Low_complexity 1 21 0 831 105 32 0 chr5 107127061 107127185 -95958347 - L1MA7 LINE L1 0 6291 6164 14559 181 26 8 chr5 107127186 107129478 -95956054 - L1M2 LINE L1 -743 5403 3186 2102 143 0 6 chr5 107129478 107129792 -95955740 + AluSx SINE Alu 1 312 0 14559 181 26 8 chr5 107129792 107130519 -95955013 - L1M2 LINE L1 -2960 3186 2473 2113 117 10 32 chr5 107130562 107130870 -95954662 - AluSx SINE Alu -11 301 1 266 209 15 0 chr5 107131025 107131092 -95954440 - HAL1b LINE L1 -656 692 625 493 226 240 0 chr5 107131157 107131303 -95954229 + MER5A DNA MER1_type 9 189 0 778 228 0 33 chr5 107131311 107131495 -95954037 - MER5B DNA MER1_type 0 178 1 199 276 17 17 chr5 107131612 107131670 -95953862 + MER5A DNA MER1_type 131 188 -1 * 218 322 34 0 chr5 107131670 107131728 -95953804 - L2 LINE L2 -2027 1287 1228 400 240 96 0 chr5 107132014 107132139 -95953393 - MIR3 SINE MIR -5 203 67 1995 151 0 3 chr5 107132293 107132591 -95952941 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr5 107133368 107133398 -95952134 + AT_rich Low_complexity Low_complexity 1 30 0 251 224 0 0 chr5 107133558 107133607 -95951925 - MER63 DNA MER1_type -3 1059 1011 3601 138 52 9 chr5 107133650 107134176 -95951356 - LTR39 LTR ERV1 0 783 232 4684 102 28 2 chr5 107134176 107134794 -95950738 + MER51A LTR ERV1 1 634 0 3601 138 52 9 chr5 107134794 107134811 -95950721 - LTR39 LTR ERV1 -551 232 217 6315 121 20 5 chr5 107134831 107136035 -95949497 + L1PB1 LINE L1 4938 6151 0 192 152 0 0 chr5 107136062 107136095 -95949437 + A-rich Low_complexity Low_complexity 1 33 0 1310 97 24 89 chr5 107136095 107136342 -95949190 - LTR39 LTR ERV1 -552 231 1 292 211 70 0 chr5 107136342 107136399 -95949133 - MER63 DNA MER1_type -315 745 685 356 212 141 94 chr5 107136762 107136825 -95948707 - MER5B DNA MER1_type 0 178 119 2591 65 0 0 chr5 107136825 107137134 -95948398 + AluSc SINE Alu 1 309 0 356 212 141 94 chr5 107137134 107137240 -95948292 - MER5B DNA MER1_type -59 119 1 354 304 116 53 chr5 107137724 107138265 -95947267 - L2 LINE L2 -5 3308 2733 1429 249 81 88 chr5 107138293 107138987 -95946545 + MER21B LTR ERV1 24 712 -151 225 0 0 0 chr5 107138993 107139018 -95946514 + (TG)n Simple_repeat Simple_repeat 2 26 0 2061 180 123 75 chr5 107139611 107140365 -95945167 + LTR1B LTR ERV1 1 981 -39 2890 184 119 53 chr5 107140492 107141327 -95944205 - Charlie2 DNA MER1_type -35 2827 1924 2286 109 0 31 chr5 107141327 107141649 -95943883 + AluSx SINE Alu 1 312 0 2890 184 119 53 chr5 107141649 107141725 -95943807 - Charlie2 DNA MER1_type -938 1924 1855 478 286 82 52 chr5 107141699 107142028 -95943504 - Charlie2 DNA MER1_type -2519 343 5 * 233 333 31 0 chr5 107142824 107142920 -95942612 - MER5A DNA MER1_type -2 187 89 239 307 140 0 chr5 107143415 107143529 -95942003 - MIR SINE MIR -83 179 50 1295 113 21 0 chr5 107144008 107144194 -95941338 - AluSc SINE Alu -2 307 118 1595 206 54 34 chr5 107144650 107145003 -95940529 - MLT1A1 LTR MaLR -2 565 1 983 218 98 36 chr5 107146336 107146412 -95939120 - MER8 DNA MER2_type 0 239 169 2837 111 39 5 chr5 107146412 107146826 -95938706 + MSTA LTR MaLR 1 428 0 983 218 98 36 chr5 107146826 107146974 -95938558 - MER8 DNA MER2_type -70 169 1 615 276 109 58 chr5 107147144 107147492 -95938040 - L1ME3 LINE L1 -211 5951 5586 24 0 0 0 chr5 107148098 107148122 -95937410 + AT_rich Low_complexity Low_complexity 1 24 0 2225 105 0 3 chr5 107148688 107148983 -95936549 + AluSc SINE Alu 6 299 -10 24 67 0 0 chr5 107149367 107149412 -95936120 + AT_rich Low_complexity Low_complexity 1 45 0 1890 133 7 14 chr5 107150141 107150449 -95935083 - AluSx SINE Alu 0 306 1 245 276 86 0 chr5 107151832 107151890 -95933642 - L2 LINE L2 -21 3251 3189 262 173 213 63 chr5 107151934 107152061 -95933471 + MER104 DNA Tc2 4 149 -31 271 283 0 0 chr5 107152228 107152288 -95933244 - L2 LINE L2 -5 3267 3208 1787 213 29 5 chr5 107152288 107152696 -95932836 + L1M4 LINE L1 2586 3003 -3143 188 211 26 0 chr5 107152697 107152735 -95932797 - L2 LINE L2 -86 3186 3148 23 55 0 18 chr5 107152752 107152772 -95932760 + AT_rich Low_complexity Low_complexity 1 20 -34 1867 135 31 10 chr5 107152772 107153061 -95932471 - AluJb SINE Alu -17 295 1 23 55 0 18 chr5 107153061 107153095 -95932437 + AT_rich Low_complexity Low_complexity 20 54 0 445 314 208 7 chr5 107153119 107153423 -95932109 - L2 LINE L2 -231 3082 2707 3075 186 17 2 chr5 107153619 107154136 -95931396 + Tigger7 DNA MER2_type 1 525 -208 418 192 0 0 chr5 107154130 107154203 -95931329 + Tigger7 DNA MER2_type 2400 2472 -19 * 479 320 40 0 chr5 107154303 107154453 -95931079 - L2 LINE L2 -609 2705 2550 2362 235 63 19 chr5 107154488 107155055 -95930477 + MLT1E LTR MaLR 1 592 -1 375 135 0 0 chr5 107155063 107155115 -95930417 + THE1C LTR MaLR 320 371 -4 850 161 0 0 chr5 107155115 107155233 -95930299 - FLAM_C SINE Alu -15 118 1 503 71 43 0 chr5 107155234 107155304 -95930228 - MLT2B1 LTR ERVL -447 73 1 2090 179 21 30 chr5 107156476 107156906 -95928626 + MLT2D LTR ERVL 1 512 -8 246 81 0 0 chr5 107158297 107158334 -95927198 + (CA)n Simple_repeat Simple_repeat 1 37 0 2251 78 0 3 chr5 107158597 107158927 -95926605 + AluSc SINE Alu 1 329 0 580 249 160 62 chr5 107159836 107160317 -95925215 + LTR67 LTR ERVL 23 550 -7 374 186 0 0 chr5 107160530 107160600 -95924932 + LTR33 LTR ERVL 4 73 -448 787 176 55 41 chr5 107160885 107161095 -95924437 - MER61D LTR ERV1 -12 741 337 186 254 0 0 chr5 107161872 107161939 -95923593 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 189 314 12 47 chr5 107161939 107162025 -95923507 + MER5A DNA MER1_type 85 167 -22 2238 103 0 0 chr5 107162125 107162416 -95923116 + AluSp SINE Alu 21 311 -2 723 203 8 0 chr5 107163425 107163553 -95921979 + MLT1E LTR MaLR 1 129 -464 710 237 148 50 chr5 107163542 107163829 -95921703 + MLT1E LTR MaLR 266 622 -2 * 2197 104 3 3 chr5 107164138 107164435 -95921097 - AluSc SINE Alu -12 297 1 262 254 0 100 chr5 107165637 107165767 -95919765 + L1P LINE L1 5310 5426 -740 458 289 86 11 chr5 107166168 107166355 -95919177 - MLT1K LTR MaLR -35 553 353 267 235 78 43 chr5 107166359 107166474 -95919058 + MIR SINE MIR 94 212 -50 21 0 0 0 chr5 107166684 107166705 -95918827 + AT_rich Low_complexity Low_complexity 1 21 0 231 195 0 0 chr5 107167244 107167285 -95918247 + MLT1I LTR MaLR 109 149 -260 307 290 117 68 chr5 107167293 107167455 -95918077 + MIR SINE MIR 86 255 -7 207 0 0 0 chr5 107167908 107167931 -95917601 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4128 97 16 0 chr5 107168442 107168987 -95916545 + MER41A LTR ERV1 1 554 0 612 0 0 0 chr5 107169547 107169615 -95915917 + (CA)n Simple_repeat Simple_repeat 2 69 0 278 295 0 27 chr5 107170050 107170162 -95915370 + G-rich Low_complexity Low_complexity 2 110 0 305 0 50 0 chr5 107170806 107170846 -95914686 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 812 41 0 0 chr5 107171085 107171183 -95914349 + AluSg/x SINE Alu 208 305 -7 268 270 270 7 chr5 107171248 107171396 -95914136 + MIR SINE MIR 76 262 0 183 214 24 0 chr5 107172398 107172440 -95913092 + MER5B DNA MER1_type 7 49 -129 429 283 26 26 chr5 107172492 107172605 -95912927 - MER5B DNA MER1_type -59 119 7 2332 101 3 0 chr5 107172845 107173141 -95912391 - AluSc SINE Alu -12 297 1 460 187 22 90 chr5 107173479 107173613 -95911919 + LTR67 LTR ERVL 431 555 -2 1455 240 53 12 chr5 107174695 107175112 -95910420 - MLT1C LTR MaLR 0 467 34 24 53 0 0 chr5 107175404 107175442 -95910090 + AT_rich Low_complexity Low_complexity 1 38 0 372 247 108 18 chr5 107175508 107175897 -95909635 - L1ME4a LINE L1 -294 5827 5319 2478 70 0 0 chr5 107175925 107176223 -95909309 - AluSg SINE Alu 0 310 13 1937 153 0 19 chr5 107176317 107176631 -95908901 - AluJb SINE Alu 0 312 5 2263 124 7 0 chr5 107178642 107178949 -95906583 + AluSx SINE Alu 1 309 -3 711 197 8 0 chr5 107179102 107179234 -95906298 + FLAM_C SINE Alu 1 133 0 2503 73 0 0 chr5 107179474 107179774 -95905758 - AluY SINE Alu -11 300 1 316 133 0 0 chr5 107180001 107180061 -95905471 + L1MB7 LINE L1 6109 6168 -16 1582 152 4 8 chr5 107180153 107180409 -95905123 - AluJb SINE Alu -31 281 27 366 154 37 206 chr5 107180663 107180720 -95904812 - MER81 DNA DNA 0 114 92 1374 164 62 66 chr5 107180720 107181024 -95904508 + AluJo SINE Alu 3 305 -7 366 154 37 206 chr5 107181024 107181102 -95904430 - MER81 DNA DNA -22 92 2 225 293 103 86 chr5 107181149 107181323 -95904209 + MIR3 SINE MIR 17 193 -15 430 294 145 10 chr5 107181816 107182119 -95903413 - L1MEd LINE L1 -5215 904 561 317 270 48 40 chr5 107182139 107182265 -95903267 - L1MEd LINE L1 -5725 394 268 1953 151 3 28 chr5 107183330 107183647 -95901885 + AluJb SINE Alu 4 312 0 208 154 19 77 chr5 107186012 107186064 -95899468 - L2 LINE L2 0 3313 3265 421 209 99 113 chr5 107186136 107186490 -95899042 + Charlie8 DNA MER1_type 46 394 -2023 285 218 0 26 chr5 107186501 107186579 -95898953 + Charlie8 DNA MER1_type 2339 2414 -3 649 260 178 10 chr5 107187892 107188100 -95897432 - MIR SINE MIR -15 247 5 2266 108 0 0 chr5 107188321 107188617 -95896915 - AluSx SINE Alu -16 296 1 433 211 55 0 chr5 107189789 107189908 -95895624 - L1MC4 LINE L1 -1 8041 7880 195 100 0 0 chr5 107189914 107189944 -95895588 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 492 192 0 0 chr5 107189943 107190047 -95895485 + (TA)n Simple_repeat Simple_repeat 1 104 0 1873 202 19 47 chr5 107190142 107190259 -95895273 - L1MC4 LINE L1 -122 7920 7801 2300 97 0 0 chr5 107190259 107190567 -95894965 + AluSq SINE Alu 1 308 -5 1873 202 19 47 chr5 107190567 107190978 -95894554 - L1MC4 LINE L1 -241 7801 7407 260 322 52 17 chr5 107191128 107191243 -95894289 + L2 LINE L2 3153 3271 -1 23 33 0 0 chr5 107192938 107192968 -95892564 + AT_rich Low_complexity Low_complexity 1 30 0 1953 116 42 0 chr5 107193326 107193611 -95891921 - AluSx SINE Alu -15 297 1 333 0 0 0 chr5 107193960 107193997 -95891535 + (TG)n Simple_repeat Simple_repeat 2 38 0 2345 60 7 3 chr5 107195509 107195807 -95889725 + AluY SINE Alu 1 299 -12 202 299 90 0 chr5 107196780 107196847 -95888685 + MIR SINE MIR 84 156 -106 28 61 0 0 chr5 107197393 107197442 -95888090 + AT_rich Low_complexity Low_complexity 1 49 0 684 266 207 16 chr5 107198552 107198856 -95886676 - L2 LINE L2 -36 3277 2916 660 303 125 30 chr5 107198917 107199671 -95885861 + L2 LINE L2 2454 3296 -17 286 243 114 0 chr5 107199777 107199847 -95885685 - MIR SINE MIR -60 148 71 349 273 141 27 chr5 107201857 107202294 -95883238 + LTR33 LTR ERVL 23 521 0 32 0 0 0 chr5 107204177 107204209 -95881323 + AT_rich Low_complexity Low_complexity 1 32 0 259 259 19 0 chr5 107206783 107206837 -95878695 - L3 LINE CR1 -5 1572 1518 3125 197 51 14 chr5 107207562 107208322 -95877210 + L1MA9 LINE L1 5487 6274 -38 561 252 109 81 chr5 107208774 107209095 -95876437 - L2 LINE L2 -2 3270 2941 1903 144 3 7 chr5 107209413 107209698 -95875834 + AluJb SINE Alu 1 284 -28 188 259 52 17 chr5 107210184 107210242 -95875290 + MIR SINE MIR 197 256 -6 207 0 0 0 chr5 107212445 107212468 -95873064 + (T)n Simple_repeat Simple_repeat 1 23 0 583 295 53 11 chr5 107213408 107213598 -95871934 + MIR SINE MIR 65 262 0 190 327 115 18 chr5 107213832 107213945 -95871587 - MIR3 SINE MIR -76 132 9 192 200 0 0 chr5 107214413 107214453 -95871079 + (CA)n Simple_repeat Simple_repeat 2 41 0 229 218 103 0 chr5 107215778 107215856 -95869676 - L1ME LINE L1 -383 5781 5696 232 323 11 11 chr5 107215883 107215976 -95869556 - L1ME LINE L1 -2217 5591 5499 22 80 0 0 chr5 107217396 107217446 -95868086 + AT_rich Low_complexity Low_complexity 1 50 0 302 223 85 0 chr5 107219360 107219454 -95866078 - MER103 DNA DNA -48 118 17 2096 145 0 0 chr5 107219808 107220118 -95865414 + AluSg SINE Alu 1 310 0 261 222 62 62 chr5 107220792 107220873 -95864659 - L2 LINE L2 -34 3279 3199 1207 157 48 22 chr5 107221148 107221378 -95864154 + MER46A DNA MER2_type 1 236 0 1972 145 13 7 chr5 107222428 107222738 -95862794 - AluJo SINE Alu 0 312 1 322 233 121 58 chr5 107224427 107224497 -95861035 - MER112 DNA MER1_type -35 225 161 1838 177 0 20 chr5 107224497 107224797 -95860735 + AluJb SINE Alu 1 294 -18 288 0 0 0 chr5 107224804 107224836 -95860696 + (TG)n Simple_repeat Simple_repeat 2 33 0 322 233 121 58 chr5 107224836 107224963 -95860569 - MER112 DNA MER1_type -104 156 7 207 0 0 0 chr5 107225203 107225226 -95860306 + (A)n Simple_repeat Simple_repeat 1 23 0 327 271 75 9 chr5 107226328 107226435 -95859097 + MIR SINE MIR 117 230 -32 22 0 0 0 chr5 107226890 107226912 -95858620 + AT_rich Low_complexity Low_complexity 1 22 0 528 276 17 11 chr5 107227394 107227568 -95857964 + MIR SINE MIR 88 262 0 862 214 51 17 chr5 107227718 107227896 -95857636 + MER5A DNA MER1_type 6 189 0 1775 171 3 0 chr5 107227931 107228253 -95857279 + AluJb SINE Alu 1 323 0 871 228 40 28 chr5 107229774 107230024 -95855508 + MIR SINE MIR 9 261 -1 424 230 74 37 chr5 107231616 107231785 -95853747 + MIR SINE MIR 7 186 -62 232 231 39 0 chr5 107232442 107232494 -95853038 - MIR SINE MIR -5 257 204 2819 85 0 0 chr5 107233189 107233553 -95851979 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr5 107234424 107234448 -95851084 + AT_rich Low_complexity Low_complexity 1 24 0 1689 152 21 95 chr5 107237104 107237524 -95848008 + MLT1B LTR MaLR 2 390 0 328 298 67 0 chr5 107238275 107238379 -95847153 - L1ME3A LINE L1 -224 5946 5836 228 292 50 8 chr5 107238582 107238702 -95846830 - L1ME3A LINE L1 -676 5490 5366 250 223 141 0 chr5 107238703 107238824 -95846708 - L1ME3A LINE L1 -808 5338 5201 2256 106 0 10 chr5 107238824 107239127 -95846405 - AluSx SINE Alu -12 300 1 2265 114 0 0 chr5 107239448 107239738 -95845794 - AluSx SINE Alu -22 290 1 216 0 0 0 chr5 107240248 107240272 -95845260 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1769 142 55 68 chr5 107240570 107240950 -95844582 + THE1C LTR MaLR 1 375 0 183 184 0 61 chr5 107241275 107241324 -95844208 + L2 LINE L2 3190 3235 -78 21 36 0 0 chr5 107241668 107241696 -95843836 + AT_rich Low_complexity Low_complexity 1 28 0 290 292 94 0 chr5 107241782 107241878 -95843654 - MIR SINE MIR -111 151 47 190 291 128 12 chr5 107242454 107242540 -95842992 + MIR SINE MIR 20 115 -147 325 324 0 9 chr5 107242764 107242875 -95842657 + CT-rich Low_complexity Low_complexity 5 114 0 190 315 92 31 chr5 107242896 107243026 -95842506 + L2 LINE L2 2281 2418 -896 351 185 148 0 chr5 107243053 107243134 -95842398 - MER96 DNA MER1_type? -28 147 55 1964 87 4 0 chr5 107243882 107244134 -95841398 - AluSp SINE Alu -11 302 50 1403 12 0 0 chr5 107244955 107245124 -95840408 - L1PA2 LINE L1 -1117 5029 4861 7681 20 0 6 chr5 107245124 107246301 -95839231 + L1PA2 LINE L1 5002 6155 0 780 253 109 11 chr5 107247175 107247440 -95838092 - MER102a DNA MER1_type -12 318 28 2480 50 0 3 chr5 107249003 107249306 -95836226 + AluY SINE Alu 1 302 -9 22 35 0 0 chr5 107250032 107250061 -95835471 + AT_rich Low_complexity Low_complexity 1 29 0 230 114 0 23 chr5 107250299 107250343 -95835189 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 23 0 0 0 chr5 107251706 107251729 -95833803 + AT_rich Low_complexity Low_complexity 1 23 0 489 259 46 0 chr5 107252203 107252334 -95833198 - MIR SINE MIR -44 218 82 344 212 150 53 chr5 107252454 107252567 -95832965 - MIR SINE MIR -79 183 60 1937 134 29 0 chr5 107252925 107253231 -95832301 - AluJo SINE Alu 0 314 1 21 40 0 40 chr5 107253265 107253297 -95832235 + AT_rich Low_complexity Low_complexity 1 32 -16 1868 159 3 7 chr5 107253297 107253593 -95831939 + AluJo SINE Alu 1 295 -17 21 40 0 40 chr5 107253593 107253610 -95831922 + AT_rich Low_complexity Low_complexity 32 48 0 25 75 0 0 chr5 107253698 107253751 -95831781 + AT_rich Low_complexity Low_complexity 1 53 0 1636 162 45 0 chr5 107254518 107254636 -95830896 + AluJo SINE Alu 4 115 -194 273 29 0 0 chr5 107254636 107254670 -95830862 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1636 162 45 0 chr5 107254670 107254845 -95830687 + AluJo SINE Alu 115 309 0 297 344 195 5 chr5 107255302 107255497 -95830035 + MIR SINE MIR 31 262 0 283 305 0 24 chr5 107255514 107255596 -95829936 + MIR SINE MIR 18 97 -111 191 237 0 0 chr5 107255666 107255704 -95829828 + L2 LINE L2 3216 3253 -19 364 339 9 0 chr5 107257619 107257734 -95827798 - L2 LINE L2 -14 3299 3184 1341 161 0 0 chr5 107258323 107258522 -95827010 + AluJo SINE Alu 5 203 -109 1138 99 31 0 chr5 107259223 107259385 -95826147 - L1PA15 LINE L1 -2 6163 5997 312 204 193 23 chr5 107259571 107259659 -95825873 + MIR SINE MIR 49 151 -111 189 260 99 127 chr5 107259743 107260076 -95825456 + L2 LINE L2 2553 2896 -417 581 238 58 58 chr5 107260076 107260337 -95825195 + MIR SINE MIR 2 262 0 189 260 99 127 chr5 107260337 107260414 -95825118 + L2 LINE L2 2896 2974 -339 200 287 122 26 chr5 107260851 107260966 -95824566 + MIR SINE MIR 89 214 -48 313 311 17 17 chr5 107261193 107261312 -95824220 + L2 LINE L2 3195 3313 0 621 311 57 0 chr5 107262148 107262341 -95823191 - MIR SINE MIR -34 228 25 209 318 109 0 chr5 107263303 107263413 -95822119 + MIR3 SINE MIR 75 196 -12 511 335 80 13 chr5 107263470 107263709 -95821823 + MIR SINE MIR 8 262 0 2153 121 7 3 chr5 107263791 107264088 -95821444 - AluSx SINE Alu -14 298 1 2162 132 0 3 chr5 107264349 107264652 -95820880 + AluSc SINE Alu 1 302 -7 1703 174 13 29 chr5 107265152 107265462 -95820070 + AluJb SINE Alu 2 306 -6 488 231 87 0 chr5 107265471 107265575 -95819957 + MIR SINE MIR 15 127 -135 389 249 58 69 chr5 107266132 107266321 -95819211 + MIR SINE MIR 73 259 -3 21 36 0 0 chr5 107268276 107268304 -95817228 + AT_rich Low_complexity Low_complexity 1 28 0 341 360 84 26 chr5 107268551 107268934 -95816598 + L1MEd LINE L1 389 793 -5326 244 154 0 0 chr5 107268934 107268973 -95816559 + AluJb SINE Alu 1 39 -264 1743 151 0 7 chr5 107269030 107269302 -95816230 + AluJb SINE Alu 42 311 -1 329 273 17 34 chr5 107269319 107269495 -95816037 + L1MEd LINE L1 908 1080 -5039 1764 106 0 4 chr5 107270152 107270387 -95815145 + AluSc SINE Alu 58 291 -18 228 302 124 16 chr5 107271925 107272054 -95813478 + MIR SINE MIR 120 262 0 23 0 0 0 chr5 107272090 107272113 -95813419 + AT_rich Low_complexity Low_complexity 1 23 0 1763 148 25 44 chr5 107272425 107272742 -95812790 - AluJo SINE Alu -1 311 1 250 237 34 0 chr5 107274106 107274165 -95811367 + MIR SINE MIR 89 149 -113 27 49 0 0 chr5 107275020 107275061 -95810471 + GC_rich Low_complexity Low_complexity 1 41 0 436 197 63 14 chr5 107275435 107275577 -95809955 + L1MC4 LINE L1 7017 7165 -877 27 0 0 0 chr5 107275577 107275604 -95809928 + AT_rich Low_complexity Low_complexity 1 27 0 2234 102 3 3 chr5 107275959 107276254 -95809278 - AluSx SINE Alu -15 297 3 2111 118 7 3 chr5 107276552 107276848 -95808684 + AluSx SINE Alu 1 297 -15 212 256 55 85 chr5 107276979 107277143 -95808389 - MER5B DNA MER1_type -2 176 18 479 265 161 12 chr5 107277176 107277338 -95808194 + MER5A DNA MER1_type 4 189 0 301 269 19 37 chr5 107277675 107277783 -95807749 - MIR3 SINE MIR -51 157 52 498 314 139 22 chr5 107277953 107278450 -95807082 + LTR67 LTR ERVL 3 557 0 209 356 0 0 chr5 107278494 107278581 -95806951 + MIR3 SINE MIR 113 199 -9 232 323 61 24 chr5 107279244 107279408 -95806124 - L2 LINE L2 -1148 2166 1997 380 292 146 11 chr5 107279894 107280072 -95805460 - MIR SINE MIR -12 250 49 1878 97 4 26 chr5 107280595 107280862 -95804670 - AluSg SINE Alu -12 298 38 1885 136 3 63 chr5 107280909 107281225 -95804307 - AluJb SINE Alu -15 297 1 383 289 150 12 chr5 107281356 107281529 -95804003 + MIR SINE MIR 47 243 -19 254 228 0 87 chr5 107281621 107281713 -95803819 - MIR SINE MIR -1 261 178 259 286 205 0 chr5 107282232 107282393 -95803139 + L1ME LINE L1 5520 5713 -408 483 255 153 31 chr5 107282528 107282724 -95802808 - MIR SINE MIR -41 221 2 248 300 69 12 chr5 107282726 107282886 -95802646 + L1ME LINE L1 5748 5916 -205 2138 80 22 0 chr5 107283117 107283424 -95802108 - AluY SINE Alu 0 313 1 229 216 135 14 chr5 107284155 107284229 -95801303 - MIR3 SINE MIR -45 163 81 972 321 82 27 chr5 107284839 107285316 -95800216 - L2 LINE L2 0 3313 2811 376 298 64 14 chr5 107286002 107286143 -95799389 + MIR SINE MIR 56 203 -59 518 136 0 0 chr5 107286399 107286487 -95799045 - L1MEc LINE L1 -5670 726 639 408 136 0 102 chr5 107286523 107286611 -95798921 + Tigger3(Golem) DNA MER2_type 2 80 -2949 410 176 27 0 chr5 107286744 107286818 -95798714 + Tigger3(Golem) DNA MER2_type 2921 2996 -33 2181 134 7 0 chr5 107287250 107287555 -95797977 + AluSx SINE Alu 1 307 -5 536 274 59 0 chr5 107288029 107288164 -95797368 + MIR SINE MIR 3 145 -117 210 167 24 0 chr5 107288774 107288816 -95796716 + (CA)n Simple_repeat Simple_repeat 2 44 0 452 247 106 47 chr5 107289194 107289429 -95796103 - L1ME4a LINE L1 -259 5862 5614 1373 215 25 14 chr5 107290409 107290763 -95794769 + MER31B LTR ERV1 1 358 -108 339 138 147 95 chr5 107290763 107290879 -95794653 + MER31-int LTR ERV1 3759 3880 -1056 596 161 8 8 chr5 107290887 107291005 -95794527 + MER31A LTR ERV1 365 482 -3 180 179 0 0 chr5 107291804 107291843 -95793689 + A-rich Low_complexity Low_complexity 1 39 0 534 288 26 37 chr5 107291895 107292086 -95793446 + MER5A DNA MER1_type 1 189 0 186 71 0 0 chr5 107292711 107292739 -95792793 + (TA)n Simple_repeat Simple_repeat 2 29 0 2188 122 0 23 chr5 107292908 107293212 -95792320 + AluSx SINE Alu 1 297 -15 797 260 29 33 chr5 107293483 107293725 -95791807 - MIR SINE MIR 0 262 22 1829 130 86 9 chr5 107295577 107295892 -95789640 - MER44D DNA MER2_type 0 609 1 2821 0 0 0 chr5 107296026 107296328 -95789204 - AluYa5 SINE Alu -9 302 1 413 266 42 21 chr5 107296329 107296521 -95789011 + HAL1b LINE L1 315 510 -838 298 209 35 52 chr5 107297287 107297402 -95788130 + L1ME4a LINE L1 5960 6072 -49 2390 92 0 19 chr5 107297406 107297722 -95787810 - AluSg SINE Alu 0 310 1 871 201 38 0 chr5 107298631 107298790 -95786742 + AluJb SINE Alu 135 299 -13 2151 108 0 16 chr5 107298922 107299228 -95786304 - AluSc SINE Alu -8 301 1 364 256 0 0 chr5 107299942 107300032 -95785500 + MER57A LTR ERV1 300 389 -14 2139 98 51 3 chr5 107300723 107301019 -95784513 - AluSg SINE Alu 0 310 1 21 0 0 0 chr5 107302008 107302029 -95783503 + AT_rich Low_complexity Low_complexity 1 21 0 1606 126 43 0 chr5 107302832 107303109 -95782423 - L1MA6 LINE L1 0 6300 6012 228 67 0 0 chr5 107303453 107303483 -95782049 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1186 227 56 40 chr5 107304115 107304511 -95781021 + MER93a LTR ERV1 1 402 0 2198 125 10 0 chr5 107305059 107305364 -95780168 - AluSx SINE Alu -4 308 1 458 192 77 15 chr5 107305386 107305516 -95780016 - L1MC4 LINE L1 0 8042 7905 261 57 0 0 chr5 107305539 107305574 -95779958 + (GA)n Simple_repeat Simple_repeat 2 36 0 197 429 45 0 chr5 107306112 107306245 -95779287 - MIR SINE MIR -6 256 118 2268 118 3 0 chr5 107306996 107307302 -95778230 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr5 107307410 107307432 -95778100 + AT_rich Low_complexity Low_complexity 1 22 0 339 252 8 32 chr5 107307432 107307555 -95777977 + L1MB8 LINE L1 6023 6142 -36 546 270 40 17 chr5 107307771 107307945 -95777587 - MER5B DNA MER1_type 0 178 1 230 193 0 35 chr5 107308724 107308781 -95776751 + LTR33 LTR ERVL 116 170 -351 745 169 169 20 chr5 107308843 107309044 -95776488 + LTR33A LTR ERVL 266 496 -27 326 310 101 13 chr5 107309110 107309268 -95776264 + MIR SINE MIR 85 256 -6 216 135 0 0 chr5 107309621 107309658 -95775874 + (TG)n Simple_repeat Simple_repeat 1 37 0 2168 85 0 7 chr5 107309747 107310062 -95775470 - AluY SINE Alu 0 313 1 212 0 36 0 chr5 107311507 107311535 -95773997 + (TG)n Simple_repeat Simple_repeat 2 30 0 267 272 18 0 chr5 107311830 107311999 -95773533 + (TA)n Simple_repeat Simple_repeat 2 173 0 387 127 0 0 chr5 107312004 107312067 -95773465 + (TG)n Simple_repeat Simple_repeat 2 64 0 1384 184 18 25 chr5 107312286 107312612 -95772920 + MER33 DNA MER1_type 1 324 0 699 142 9 0 chr5 107313232 107313338 -95772194 + FLAM_C SINE Alu 1 107 -36 453 238 0 18 chr5 107313378 107313546 -95771986 + (TA)n Simple_repeat Simple_repeat 2 166 0 224 211 0 0 chr5 107313601 107313639 -95771893 + L2 LINE L2 3265 3302 -11 189 175 0 0 chr5 107314029 107314069 -95771463 + CT-rich Low_complexity Low_complexity 1 40 0 303 293 122 91 chr5 107314741 107315420 -95770112 + L1M2 LINE L1 684 1383 -5466 227 30 0 30 chr5 107315446 107315479 -95770053 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 1752 135 32 42 chr5 107316349 107316661 -95768871 - AluSx SINE Alu -3 309 1 203 315 37 56 chr5 107317298 107317406 -95768126 - L2 LINE L2 -17 3255 3150 2066 123 0 3 chr5 107317968 107318260 -95767272 + AluSx SINE Alu 6 296 -16 1951 142 30 6 chr5 107318420 107318758 -95766774 + Tigger1 DNA MER2_type 1 346 -2072 674 273 15 38 chr5 107318881 107319148 -95766384 + MIR SINE MIR 2 262 0 2229 102 0 7 chr5 107319683 107319978 -95765554 - AluSx SINE Alu -19 293 1 358 231 26 34 chr5 107321577 107321694 -95763838 + MER112 DNA MER1_type 1 116 -144 289 246 85 34 chr5 107321995 107322113 -95763419 + MER112 DNA MER1_type 137 260 0 327 306 115 25 chr5 107322214 107322371 -95763161 - L3b LINE CR1 -120 1463 1293 298 324 16 39 chr5 107323390 107323468 -95762064 + A-rich Low_complexity Low_complexity 2 80 -99 2337 106 3 10 chr5 107323468 107323780 -95761752 + AluSg SINE Alu 1 310 0 298 324 16 39 chr5 107323780 107323883 -95761649 + A-rich Low_complexity Low_complexity 80 179 0 389 284 116 0 chr5 107324186 107324341 -95761191 - MIR SINE MIR -43 219 47 362 279 71 19 chr5 107325668 107325822 -95759710 + MIR SINE MIR 15 176 -86 334 317 42 49 chr5 107325848 107325990 -95759542 + HAL1 LINE L1 4 144 -2363 289 268 98 24 chr5 107326130 107326253 -95759279 + HAL1 LINE L1 303 434 -2073 331 274 92 46 chr5 107326274 107326427 -95759105 + HAL1 LINE L1 1168 1327 -1180 353 21 0 21 chr5 107327144 107327191 -95758341 + (CA)n Simple_repeat Simple_repeat 1 46 0 323 321 34 23 chr5 107327436 107327762 -95757770 - MLT1J1 LTR MaLR -8 401 70 653 262 84 15 chr5 107327818 107328020 -95757512 + MIR SINE MIR 46 261 -1 216 278 134 21 chr5 107328198 107328295 -95757237 - MIR SINE MIR -64 144 37 359 221 13 0 chr5 107328778 107328855 -95756677 - MER116 DNA Mariner -2 78 1 304 289 41 21 chr5 107328936 107329033 -95756499 - L2 LINE L2 -5 3308 3210 304 276 11 23 chr5 107329081 107329168 -95756364 + MIR SINE MIR 21 106 -156 249 33 0 0 chr5 107329174 107329204 -95756328 + (CA)n Simple_repeat Simple_repeat 1 30 0 1306 190 48 101 chr5 107330026 107330421 -95755111 - MLT1B LTR MaLR -16 374 1 23 0 0 0 chr5 107331116 107331139 -95754393 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 107331278 107331305 -95754227 + AT_rich Low_complexity Low_complexity 1 27 0 1171 290 66 30 chr5 107331366 107331942 -95753590 - L1MC4a LINE L1 -1875 5933 5337 29 47 0 0 chr5 107332122 107332165 -95753367 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr5 107332337 107332371 -95753161 + AT_rich Low_complexity Low_complexity 1 34 0 543 332 128 31 chr5 107332516 107332962 -95752570 - L2 LINE L2 -5 3308 2820 1007 206 24 4 chr5 107333733 107333986 -95751546 + L1MD3 LINE L1 7730 7987 -8 734 213 173 13 chr5 107334275 107334500 -95751032 - MER63 DNA MER1_type 0 1060 800 1403 312 62 51 chr5 107334725 107335254 -95750278 + L2 LINE L2 2179 2701 -612 2528 232 40 15 chr5 107335254 107335861 -95749671 + MLT1E3 LTR MaLR 3 624 0 1403 312 62 51 chr5 107335861 107336420 -95749112 + L2 LINE L2 2701 3283 -30 1541 97 0 0 chr5 107338658 107338885 -95746647 + L1PA13 LINE L1 5935 6161 -2 283 272 136 0 chr5 107339046 107339193 -95746339 - L1M4b LINE L1 -2102 4855 4689 25 31 0 0 chr5 107339199 107339231 -95746301 + AT_rich Low_complexity Low_complexity 1 32 0 970 284 115 43 chr5 107339451 107340413 -95745119 - L1M4b LINE L1 -2583 4374 3306 363 44 0 0 chr5 107340413 107340458 -95745074 + (CA)n Simple_repeat Simple_repeat 2 46 0 970 284 115 43 chr5 107340458 107340701 -95744831 - L1M4b LINE L1 -3651 3306 3082 345 268 149 31 chr5 107340738 107340975 -95744557 - L1M4b LINE L1 -3989 2968 2733 344 88 18 0 chr5 107341373 107341430 -95744102 + (TG)n Simple_repeat Simple_repeat 2 59 0 33 43 0 0 chr5 107341657 107341704 -95743828 + AT_rich Low_complexity Low_complexity 1 47 0 7257 39 10 1 chr5 107341704 107343275 -95742257 - L1PA4 LINE L1 -11 6144 4564 288 154 0 0 chr5 107343797 107343849 -95741683 + (TA)n Simple_repeat Simple_repeat 2 53 0 291 289 94 6 chr5 107344539 107344698 -95740834 - Charlie7 DNA MER1_type 0 2612 2440 492 235 60 42 chr5 107346044 107346261 -95739271 + L1MDa LINE L1 1441 1661 -4879 354 167 179 0 chr5 107346287 107346365 -95739167 + MLT1G LTR MaLR 478 569 -21 3460 119 47 2 chr5 107346395 107346932 -95738600 - L1PA11 LINE L1 -7 6167 5607 1740 191 88 116 chr5 107346932 107347090 -95738442 + L1MDa LINE L1 1649 1810 -4730 2165 123 3 0 chr5 107347090 107347400 -95738132 + AluSx SINE Alu 2 312 0 1740 191 88 116 chr5 107347400 107348222 -95737310 + L1MDa LINE L1 1810 2601 -3939 375 316 46 0 chr5 107348286 107348438 -95737094 + MER58 DNA MER1_type 2 160 -181 1127 58 19 19 chr5 107348444 107348599 -95736933 + AluY SINE Alu 1 155 -156 182 241 14 121 chr5 107348924 107349131 -95736401 - L2 LINE L2 -2593 721 537 385 304 146 23 chr5 107349136 107349396 -95736136 - L2 LINE L2 -2959 355 64 13242 62 11 2 chr5 107349524 107351318 -95734214 - L1P LINE L1 -3166 2980 1170 5913 82 1 22 chr5 107351311 107352244 -95733288 + L1P LINE L1 2966 3878 -2268 * 25 51 0 0 chr5 107352390 107352429 -95733103 + AT_rich Low_complexity Low_complexity 1 39 0 1630 268 55 62 chr5 107352464 107352600 -95732932 - L1M4b LINE L1 -4543 2416 2281 1606 224 70 0 chr5 107352600 107352970 -95732562 - MSTD LTR MaLR 0 396 1 1630 268 55 62 chr5 107352970 107353645 -95731887 - L1M4b LINE L1 -4678 2281 1603 207 0 0 0 chr5 107353645 107353668 -95731864 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2284 76 6 38 chr5 107353669 107354011 -95731521 - L1PA7 LINE L1 -11 6143 5813 3024 147 16 8 chr5 107354017 107354520 -95731012 - L1PA16 LINE L1 -10 6156 5650 1630 268 55 62 chr5 107354520 107354907 -95730625 - L1M4b LINE L1 -5361 1598 1205 3723 118 56 72 chr5 107355172 107356385 -95729147 + pTR5 LTR ERV1 67 2438 0 509 286 55 14 chr5 107357943 107358163 -95727369 + L1M4 LINE L1 4106 4334 -1812 1406 263 94 22 chr5 107358456 107359138 -95726394 + L1 LINE L1 3043 3773 -2373 499 216 8 16 chr5 107359149 107359274 -95726258 + L1MB8 LINE L1 5833 5956 -222 45 34 0 0 chr5 107359688 107359747 -95725785 + AT_rich Low_complexity Low_complexity 1 59 0 231 36 0 0 chr5 107359797 107359825 -95725707 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2081 104 14 7 chr5 107361924 107362221 -95723311 - AluSc SINE Alu -10 299 1 284 263 13 0 chr5 107363246 107363322 -95722210 + MER103 DNA DNA 84 160 -6 1520 56 0 15 chr5 107363530 107363727 -95721805 + L1PA7 LINE L1 5945 6138 -16 652 25 67 0 chr5 107363731 107363850 -95721682 + (TA)n Simple_repeat Simple_repeat 2 128 0 227 246 0 0 chr5 107363903 107363964 -95721568 + LTR66 LTR ERVL 379 439 -171 24 0 0 0 chr5 107364685 107364709 -95720823 + AT_rich Low_complexity Low_complexity 1 24 0 2442 94 0 0 chr5 107364798 107365106 -95720426 + AluSc SINE Alu 1 308 -1 422 277 100 42 chr5 107366006 107366272 -95719260 + L2 LINE L2 2709 3001 -312 216 274 0 0 chr5 107366300 107366351 -95719181 - L2 LINE L2 0 3313 3263 379 198 245 0 chr5 107367867 107367973 -95717559 - MIR SINE MIR -33 229 98 22 35 0 0 chr5 107368317 107368346 -95717186 + AT_rich Low_complexity Low_complexity 1 29 0 2222 61 10 7 chr5 107369519 107369814 -95715718 - AluY SINE Alu -15 296 1 201 331 130 12 chr5 107369856 107370025 -95715507 - MIR SINE MIR -16 246 58 340 224 29 17 chr5 107372047 107372221 -95713311 + CT-rich Low_complexity Low_complexity 3 178 0 394 269 6 39 chr5 107372239 107372421 -95713111 + T-rich Low_complexity Low_complexity 2 177 0 443 319 144 57 chr5 107372827 107373207 -95712325 + L2 LINE L2 2343 2689 -624 2321 80 0 0 chr5 107373207 107373495 -95712037 - AluY SINE Alu -23 288 1 443 319 144 57 chr5 107373495 107373997 -95711535 + L2 LINE L2 2689 3311 -2 183 326 70 75 chr5 107374279 107374466 -95711066 + L2 LINE L2 3126 3311 -2 3562 149 24 56 chr5 107374527 107374870 -95710662 - L1P LINE L1 -3966 2180 1828 2316 115 0 0 chr5 107374870 107375182 -95710350 - AluSx SINE Alu 0 312 1 3562 149 24 56 chr5 107375182 107375575 -95709957 - L1P LINE L1 -4318 1828 1467 2711 293 45 34 chr5 107375994 107376909 -95708623 - L1M4b LINE L1 -5923 936 12 203 338 28 41 chr5 107378061 107378206 -95707326 + MIR SINE MIR 26 168 -94 294 221 39 10 chr5 107378381 107378485 -95707047 + (TA)n Simple_repeat Simple_repeat 2 108 0 288 267 120 26 chr5 107378525 107378716 -95706816 + L1ME2 LINE L1 4907 5115 -1031 356 198 2 50 chr5 107378741 107378838 -95706694 + AluJ/FLAM SINE Alu 2 73 -229 542 282 78 16 chr5 107378838 107379083 -95706449 + L1ME2 LINE L1 5752 6011 -153 591 194 29 0 chr5 107379098 107379237 -95706295 + L1MA10 LINE L1 6175 6317 -17 1707 139 20 0 chr5 107379419 107379671 -95705861 + AluSq SINE Alu 1 257 -56 189 74 0 0 chr5 107380125 107380152 -95705380 + (TATAA)n Simple_repeat Simple_repeat 5 31 0 1869 206 18 21 chr5 107381223 107381660 -95703872 + L1P3 LINE L1 31 466 -5409 262 193 25 76 chr5 107381696 107381815 -95703717 + A-rich Low_complexity Low_complexity 4 116 0 287 261 22 44 chr5 107381873 107382053 -95703479 + A-rich Low_complexity Low_complexity 2 177 0 1248 137 201 8 chr5 107385467 107385701 -95699831 + AluSg1 SINE Alu 1 279 -30 217 67 22 22 chr5 107386755 107386800 -95698732 + (CA)n Simple_repeat Simple_repeat 1 45 0 182 288 137 75 chr5 107387538 107387684 -95697848 + MIR3 SINE MIR 3 157 -51 242 317 16 32 chr5 107389013 107389136 -95696396 - MER20B DNA MER1_type -605 178 58 273 321 43 14 chr5 107389327 107389467 -95696065 + L2 LINE L2 2982 3125 -188 830 217 182 45 chr5 107389842 107390155 -95695377 + MSTB2 LTR MaLR 42 397 -60 8834 195 25 5 chr5 107390167 107391800 -95693732 + L1MA2 LINE L1 425 2089 -5476 444 236 29 21 chr5 107391976 107392116 -95693416 + AluSg/x SINE Alu 156 296 -13 3366 186 12 16 chr5 107392118 107394716 -95690816 + L1MA2 LINE L1 4848 7557 -16 447 12 75 0 chr5 107394723 107394803 -95690729 + (TA)n Simple_repeat Simple_repeat 2 87 0 330 87 0 0 chr5 107394870 107394916 -95690616 + (TA)n Simple_repeat Simple_repeat 2 47 0 24 0 0 0 chr5 107395633 107395657 -95689875 + AT_rich Low_complexity Low_complexity 1 24 0 2471 94 0 0 chr5 107395746 107396054 -95689478 + AluSc SINE Alu 1 308 -1 427 289 138 35 chr5 107396937 107397205 -95688327 + L2 LINE L2 2709 3002 -270 954 154 0 0 chr5 107398873 107399016 -95686516 - AluSg/x SINE Alu -14 296 154 630 154 19 0 chr5 107399122 107399226 -95686306 - AluSp SINE Alu -205 108 3 260 128 0 0 chr5 107399262 107399309 -95686223 - L1MA4A LINE L1 -23 6280 6234 4727 122 16 3 chr5 107399329 107400082 -95685450 - L1MA4A LINE L1 -180 6123 5361 951 236 75 79 chr5 107400978 107401448 -95684084 - MLT1D LTR MaLR 0 505 1 324 353 32 0 chr5 107401743 107401899 -95683633 + ERVL LTR ERVL 3212 3372 -2392 766 313 93 33 chr5 107401938 107402452 -95683080 + ERVL LTR ERVL 3425 3969 -1685 227 83 0 0 chr5 107402457 107402493 -95683039 - Charlie3 DNA MER1_type -2674 36 1 498 331 0 0 chr5 107402512 107402678 -95682854 + LTR16A LTR ERVL 285 450 0 4876 128 27 70 chr5 107403115 107403339 -95682193 - L1PB1 LINE L1 -132 6735 6503 291 54 0 0 chr5 107403339 107403376 -95682156 + (TG)n Simple_repeat Simple_repeat 2 38 0 2412 78 0 3 chr5 107403383 107403679 -95681853 - AluY SINE Alu -16 295 1 4876 128 27 70 chr5 107403679 107404828 -95680704 - L1PB1 LINE L1 -370 6497 5428 5808 183 14 11 chr5 107404837 107405057 -95680475 - L1PB1 LINE L1 -2738 4124 3906 2458 82 0 0 chr5 107405057 107405362 -95680170 - AluY SINE Alu -6 305 1 5808 183 14 11 chr5 107405362 107406463 -95679069 - L1PB1 LINE L1 -2956 3906 2801 * 7529 114 38 11 chr5 107406461 107408662 -95676870 - L1PB1 LINE L1 -4425 2438 34 878 171 166 0 chr5 107409977 107410182 -95675350 - L1MA7 LINE L1 -1 6290 6052 3071 144 19 21 chr5 107410215 107410748 -95674784 - L1PA16 LINE L1 -9 6157 5626 552 287 68 73 chr5 107410844 107411350 -95674182 + MLT1J LTR MaLR 5 450 0 719 231 120 43 chr5 107412078 107412575 -95672957 - LTR50 LTR ERVL -3 792 121 5758 200 59 32 chr5 107413184 107414721 -95670811 + L1M4 LINE L1 3605 5182 -964 665 205 58 6 chr5 107414693 107414849 -95670683 + L1MD3 LINE L1 7309 7472 -523 * 360 85 0 0 chr5 107414854 107414901 -95670631 - MSTA LTR MaLR -4 424 378 814 123 0 0 chr5 107414901 107415023 -95670509 - AluSp/q SINE Alu -13 300 179 2162 133 40 13 chr5 107415027 107415403 -95670129 - MSTA LTR MaLR -42 386 1 2100 181 68 42 chr5 107415404 107415908 -95669624 + L1MD3 LINE L1 7471 7987 -8 22 0 0 0 chr5 107416316 107416338 -95669194 + AT_rich Low_complexity Low_complexity 1 22 0 305 218 135 53 chr5 107416527 107416660 -95668872 + L1ME4a LINE L1 5974 6117 -4 344 293 40 0 chr5 107417712 107417811 -95667721 + MIR SINE MIR 143 245 -17 * 395 335 110 8 chr5 107417797 107418051 -95667481 - L2 LINE L2 -386 2928 2649 273 230 29 72 chr5 107418879 107419018 -95666514 + L1MC5 LINE L1 7725 7857 -104 943 164 58 39 chr5 107419354 107419561 -95665971 - MER20 DNA MER1_type -7 212 2 21 0 0 0 chr5 107419635 107419656 -95665876 + AT_rich Low_complexity Low_complexity 1 21 0 6040 149 10 9 chr5 107419670 107421478 -95664054 - L1PB1 LINE L1 0 6867 5061 1863 129 46 27 chr5 107421469 107421879 -95663653 - L1PB1 LINE L1 -4755 2108 1691 * 3690 220 63 7 chr5 107421980 107422881 -95662651 - L1PB1 LINE L1 -5906 957 6 30 27 0 0 chr5 107422935 107422972 -95662560 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr5 107423218 107423242 -95662290 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 107424126 107424150 -95661382 + AT_rich Low_complexity Low_complexity 1 24 0 1286 123 9 28 chr5 107424275 107424414 -95661118 - L1PA10 LINE L1 0 6168 6033 2537 97 109 7 chr5 107424414 107424817 -95660715 - MLT2A1 LTR ERVL 0 444 1 1286 123 9 28 chr5 107424817 107424889 -95660643 - L1PA10 LINE L1 -135 6033 5961 2833 137 2 4 chr5 107424989 107425478 -95660054 + L1P LINE L1 3028 3515 -2631 466 296 88 47 chr5 107425583 107425746 -95659786 + L2 LINE L2 2996 3176 -137 1456 174 48 70 chr5 107425746 107426119 -95659413 + MLT1A1 LTR MaLR 1 365 0 466 296 88 47 chr5 107426119 107426229 -95659303 + L2 LINE L2 3176 3280 -33 408 70 0 0 chr5 107426387 107426444 -95659088 - Alu SINE Alu -15 296 240 784 289 62 16 chr5 107426579 107426835 -95658697 + Charlie8 DNA MER1_type 20 287 -2130 357 182 52 0 chr5 107427339 107427416 -95658116 - MER96 DNA MER1_type? -4 171 91 1251 172 52 9 chr5 107427443 107427675 -95657857 + AluJo SINE Alu 39 280 -32 431 0 37 0 chr5 107427675 107427729 -95657803 + (TAAAA)n Simple_repeat Simple_repeat 5 60 0 25 0 0 0 chr5 107427896 107427921 -95657611 + AT_rich Low_complexity Low_complexity 1 25 0 2240 255 31 18 chr5 107427929 107428705 -95656827 - L1MEc LINE L1 -4929 1467 682 13303 31 5 0 chr5 107428715 107431607 -95653925 - L1PA4 LINE L1 -2 6153 3247 450 35 0 0 chr5 107431605 107431662 -95653870 + L1PA4 LINE L1 3199 3255 -2891 * 215 147 85 194 chr5 107431679 107431808 -95653724 - L2 LINE L2 -1251 2063 1949 22 0 0 0 chr5 107432395 107432417 -95653115 + AT_rich Low_complexity Low_complexity 1 22 0 42 36 0 0 chr5 107432489 107432545 -95652987 + AT_rich Low_complexity Low_complexity 1 56 0 1274 182 14 76 chr5 107432546 107432762 -95652770 - AluJo SINE Alu -39 273 78 3122 27 0 0 chr5 107432762 107433128 -95652404 - L1PA4 LINE L1 -1 6154 5789 1274 182 14 76 chr5 107433128 107433202 -95652330 - AluJo SINE Alu -234 78 1 311 291 23 28 chr5 107433369 107433514 -95652018 + MIR SINE MIR 45 191 -62 29 60 0 0 chr5 107434996 107435046 -95650486 + AT_rich Low_complexity Low_complexity 1 50 0 2091 117 0 10 chr5 107436145 107436443 -95649089 + AluSx SINE Alu 1 295 -17 255 196 0 0 chr5 107436525 107436571 -95648961 + MER69 DNA AcHobo 1 46 -131 725 210 110 11 chr5 107436598 107436879 -95648653 + MER69 DNA AcHobo 2164 2472 -54 22 35 0 0 chr5 107437064 107437093 -95648439 + AT_rich Low_complexity Low_complexity 1 29 0 698 209 146 29 chr5 107437742 107437948 -95647584 + MIR SINE MIR 33 262 0 1799 197 31 14 chr5 107438016 107438371 -95647161 - MLT1A1 LTR MaLR 0 365 5 1466 160 0 57 chr5 107439116 107439416 -95646116 - MER50 LTR ERV1 -19 715 433 1346 114 17 30 chr5 107439404 107439641 -95645891 - MER50 LTR ERV1 -500 234 1 * 358 229 78 33 chr5 107440294 107440447 -95645085 - MLT1E3 LTR MaLR -179 445 286 298 123 123 0 chr5 107440446 107440503 -95645029 + MLT1E3 LTR MaLR 561 624 0 * 268 275 0 25 chr5 107440739 107440819 -95644713 + MLT1K LTR MaLR 217 294 -294 40661 52 2 5 chr5 107442105 107448271 -95637261 - L1PA6 LINE L1 0 6154 8 1830 158 63 37 chr5 107448600 107448979 -95636553 - MLT1B LTR MaLR 0 390 2 190 161 0 0 chr5 107449690 107449721 -95635811 - L2 LINE L2 -2 3270 3240 309 282 169 8 chr5 107450772 107450896 -95634636 - L2 LINE L2 -2 3311 3168 43 20 0 0 chr5 107450896 107450946 -95634586 + AT_rich Low_complexity Low_complexity 1 50 0 319 205 0 120 chr5 107451618 107451735 -95633797 - MER46C DNA MER2_type 0 338 236 2001 137 7 0 chr5 107451831 107452124 -95633408 - AluSx SINE Alu -17 295 1 2411 72 0 28 chr5 107452709 107453029 -95632503 - AluY SINE Alu 0 311 1 393 22 0 0 chr5 107454875 107454921 -95630611 + (CA)n Simple_repeat Simple_repeat 2 47 0 5902 86 11 3 chr5 107456297 107457184 -95628348 + L1PA12 LINE L1 5273 6168 0 186 290 32 16 chr5 107458158 107458220 -95627312 - L2 LINE L2 -80 3233 3171 1106 109 119 10 chr5 107458242 107458443 -95627089 - MSTA LTR MaLR -2 426 204 908 103 171 6 chr5 107459160 107459335 -95626197 - MSTA LTR MaLR -224 204 1 23 33 0 0 chr5 107459870 107459900 -95625632 + AT_rich Low_complexity Low_complexity 1 30 0 374 283 0 0 chr5 107460414 107460506 -95625026 + MIR SINE MIR 60 151 -111 18469 172 34 32 chr5 107461421 107462960 -95622572 + L1M1 LINE L1 19 1553 -6012 1702 199 0 13 chr5 107462960 107463267 -95622265 - AluJb SINE Alu -9 303 1 18469 172 34 32 chr5 107463267 107467772 -95617760 + L1M1 LINE L1 1553 6076 -1489 1666 121 52 0 chr5 107468330 107468602 -95616930 - AluSx SINE Alu -16 296 11 1710 112 18 25 chr5 107468615 107468900 -95616632 - AluSx SINE Alu -9 303 21 207 203 0 94 chr5 107468998 107469062 -95616470 + L2 LINE L2 3218 3275 -38 372 289 56 59 chr5 107469555 107469946 -95615586 + HERVI LTR ERV1 4991 5380 -2405 315 294 90 16 chr5 107471136 107471446 -95614086 + L1M4 LINE L1 2717 3049 -3097 439 253 137 15 chr5 107471491 107471827 -95613705 + L1M4 LINE L1 3131 3507 -2639 1910 108 3 32 chr5 107471827 107472141 -95613391 + AluSc SINE Alu 1 305 -4 299 277 77 7 chr5 107473290 107473445 -95612087 + L2 LINE L2 1946 2111 -1203 4452 182 49 12 chr5 107473705 107474820 -95610712 - L1P LINE L1 -1931 4215 3059 186 43 0 0 chr5 107475247 107475270 -95610262 + (A)n Simple_repeat Simple_repeat 1 23 0 1648 199 13 28 chr5 107475364 107475760 -95609772 + MLT1B LTR MaLR 1 390 0 258 307 28 84 chr5 107475760 107475813 -95609719 - MIR SINE MIR -68 194 140 1919 124 0 23 chr5 107475813 107476120 -95609412 - AluSc SINE Alu -9 300 1 258 307 28 84 chr5 107476120 107476234 -95609298 - MIR SINE MIR -122 140 34 1731 160 60 55 chr5 107476784 107477347 -95608185 - L1 LINE L1 -1366 4780 4215 1182 178 29 0 chr5 107477345 107477620 -95607912 + L1 LINE L1 4761 5043 -1103 * 760 98 144 16 chr5 107477621 107477815 -95607717 + AluY SINE Alu 1 219 -92 2260 80 0 10 chr5 107478656 107478957 -95606575 - AluSx SINE Alu -14 298 1 465 103 0 0 chr5 107479005 107479073 -95606459 + (TA)n Simple_repeat Simple_repeat 2 69 0 304 269 131 8 chr5 107479162 107479292 -95606240 + MIR SINE MIR 73 218 -44 832 294 60 84 chr5 107479688 107480230 -95605302 - L2 LINE L2 -249 3064 2553 2151 87 31 3 chr5 107480230 107480517 -95605015 + AluSc SINE Alu 1 295 -14 832 294 60 84 chr5 107480517 107480790 -95604742 - L2 LINE L2 -760 2553 2275 203 293 0 66 chr5 107482049 107482155 -95603377 + GA-rich Low_complexity Low_complexity 3 101 0 609 315 6 22 chr5 107482928 107483109 -95602423 + MER45A DNA AcHobo 1 178 0 5191 92 6 22 chr5 107483559 107484502 -95601030 + L1P2 LINE L1 4631 5558 -596 264 284 23 23 chr5 107485721 107485809 -95599723 - MIR SINE MIR -120 142 55 505 310 52 74 chr5 107489536 107490320 -95595212 + BaEV-int LTR ERV1 5281 6047 -602 247 308 39 31 chr5 107491775 107491905 -95593627 + L2 LINE L2 2715 2845 -469 244 208 52 21 chr5 107492051 107492147 -95593385 + L2 LINE L2 3078 3176 -137 357 82 0 0 chr5 107492438 107492487 -95593045 + (TA)n Simple_repeat Simple_repeat 1 49 0 944 186 25 69 chr5 107492584 107492945 -95592587 - L1MB8 LINE L1 -245 5933 5589 1091 188 18 45 chr5 107494861 107495084 -95590448 + MER20 DNA MER1_type 1 217 -2 262 260 110 75 chr5 107497877 107498023 -95587509 + MIR3 SINE MIR 31 181 -27 473 171 160 107 chr5 107498088 107498381 -95587151 - MER33 DNA MER1_type 0 363 2 297 0 0 0 chr5 107498478 107498511 -95587021 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 24 32 0 0 chr5 107498744 107498775 -95586757 + AT_rich Low_complexity Low_complexity 1 31 0 204 152 0 43 chr5 107499207 107499253 -95586279 + (AGGTG)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr5 107500405 107500428 -95585104 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr5 107500833 107500857 -95584675 + (TTA)n Simple_repeat Simple_repeat 1 24 0 586 289 65 22 chr5 107500864 107501096 -95584436 - MIR SINE MIR -15 247 6 887 216 13 31 chr5 107501496 107501723 -95583809 - L1MC2 LINE L1 -250 6094 5872 809 234 56 21 chr5 107501719 107501745 -95583787 - L1MEc LINE L1 -4467 1985 1961 * 1996 138 6 6 chr5 107501745 107502056 -95583476 + AluSq SINE Alu 1 311 -2 809 234 56 21 chr5 107502056 107502314 -95583218 - L1MEc LINE L1 -4491 1961 1692 1668 94 33 0 chr5 107502324 107502569 -95582963 + AluSq SINE Alu 7 259 -54 1652 142 36 7 chr5 107503346 107503621 -95581911 + AluSx SINE Alu 1 283 -29 511 298 29 57 chr5 107504236 107504481 -95581051 - MIR SINE MIR 0 262 25 788 187 35 18 chr5 107504666 107504837 -95580695 - MER5B DNA MER1_type -4 174 1 393 231 29 29 chr5 107504982 107505086 -95580446 + MER5A DNA MER1_type 9 112 -77 203 356 67 31 chr5 107505246 107505440 -95580092 - L2 LINE L2 -492 2822 2622 434 236 201 6 chr5 107506557 107506731 -95578801 + Charlie8 DNA MER1_type 69 276 -2141 277 267 70 0 chr5 107507397 107507483 -95578049 + L2 LINE L2 3222 3313 0 1885 134 10 13 chr5 107508971 107509284 -95576248 + AluSx SINE Alu 1 312 0 990 50 8 0 chr5 107509695 107509816 -95575716 - AluY SINE Alu -189 122 1 333 259 14 129 chr5 107509954 107510046 -95575486 + MIR SINE MIR 66 136 -126 1572 194 3 31 chr5 107510046 107510340 -95575192 + AluJb SINE Alu 1 286 -26 333 259 14 129 chr5 107510340 107510394 -95575138 + MIR SINE MIR 136 195 -67 2079 103 10 33 chr5 107510456 107510758 -95574774 + AluSc SINE Alu 1 295 -14 292 263 10 50 chr5 107510889 107510988 -95574544 + LTR67 LTR ERVL 396 490 -67 742 170 43 7 chr5 107511135 107511276 -95574256 - AluJo SINE Alu -165 147 2 223 143 18 18 chr5 107512569 107512625 -95572907 + GA-rich Low_complexity Low_complexity 3 58 0 482 101 71 6 chr5 107513169 107513337 -95572195 + (TA)n Simple_repeat Simple_repeat 2 180 0 233 233 116 62 chr5 107513350 107513402 -95572130 - L1MA10 LINE L1 -24 6310 6259 868 239 41 102 chr5 107513402 107513648 -95571884 - L1ME2 LINE L1 -65 6099 5892 521 30 0 0 chr5 107513648 107513714 -95571818 - L1PA2 LINE L1 0 6155 6090 868 239 41 102 chr5 107513714 107513928 -95571604 - L1ME2 LINE L1 -272 5892 5667 312 313 2 72 chr5 107514127 107514315 -95571217 - MIR3 SINE MIR -61 147 9 256 293 12 12 chr5 107514823 107514905 -95570627 + CT-rich Low_complexity Low_complexity 3 84 0 582 284 52 64 chr5 107515664 107515914 -95569618 + MIR SINE MIR 10 256 -6 1016 175 27 54 chr5 107516291 107516514 -95569018 - MER20 DNA MER1_type -2 217 1 338 296 216 6 chr5 107518952 107519128 -95566404 - MIR SINE MIR -15 247 35 2236 92 0 30 chr5 107519207 107519511 -95566021 + AluSx SINE Alu 6 300 -12 395 303 109 29 chr5 107521995 107522170 -95563362 - MIR SINE MIR -48 214 26 8193 167 25 42 chr5 107522895 107524263 -95561269 - L1 LINE L1 -856 6709 5380 861 150 8 23 chr5 107524263 107524396 -95561136 - FLAM_C SINE Alu -2 131 1 8193 167 25 42 chr5 107524396 107524866 -95560666 - L1 LINE L1 -2185 5380 4903 6927 145 96 29 chr5 107526890 107528095 -95557437 - L1 LINE L1 -4802 2763 1451 1231 217 25 4 chr5 107528095 107528376 -95557156 + AluJb SINE Alu 1 287 -25 6927 145 96 29 chr5 107528376 107528563 -95556969 - L1 LINE L1 -6114 1451 1278 231 361 0 0 chr5 107529054 107529126 -95556406 - MIR SINE MIR -75 133 62 280 272 32 154 chr5 107529204 107529450 -95556082 + MIR SINE MIR 47 262 0 303 214 110 20 chr5 107530391 107530540 -95554992 - HAL1b LINE L1 -6 6115 1194 2121 124 13 0 chr5 107531278 107531602 -95553930 + AluSx SINE Alu 1 328 0 180 228 35 18 chr5 107531621 107531678 -95553854 + MIR SINE MIR 180 237 -25 1619 187 55 71 chr5 107531954 107532388 -95553144 - MLT1E3 LTR MaLR -197 427 1 338 281 11 0 chr5 107532404 107532493 -95553039 - L1MC4 LINE L1 -1338 6704 6615 201 203 47 0 chr5 107532718 107532782 -95552750 + (CTTTG)n Simple_repeat Simple_repeat 2 68 0 1073 204 61 25 chr5 107533530 107533972 -95551560 - L1 LINE L1 -2790 4775 4318 4474 155 18 25 chr5 107534010 107534911 -95550621 - L1 LINE L1 -4101 3464 2571 7509 17 22 6 chr5 107534913 107536337 -95549195 - L1PA3 LINE L1 0 6155 4716 7560 33 31 0 chr5 107536337 107537345 -95548187 + L1PA3 LINE L1 3658 4696 -1450 261 75 0 0 chr5 107537370 107537410 -95548122 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 545 143 143 0 chr5 107537410 107537529 -95548003 - L1 LINE L1 -5027 2538 2403 8978 159 48 30 chr5 107537670 107540313 -95545219 - L1MA2 LINE L1 -295 6009 3319 1931 132 6 29 chr5 107540313 107540624 -95544908 - AluSx SINE Alu 0 312 9 8978 159 48 30 chr5 107540624 107540706 -95544826 - L1MA2 LINE L1 -2985 3319 3240 31527 46 8 5 chr5 107540806 107544857 -95540675 - L1P LINE L1 -2082 4064 4 2415 78 0 3 chr5 107545017 107545325 -95540207 + AluY SINE Alu 1 307 -4 1609 118 14 38 chr5 107545426 107545714 -95539818 + L1MA2 LINE L1 6024 6304 0 2025 158 85 36 chr5 107546170 107546619 -95538913 + HSMAR2 DNA Mariner 1 471 -831 * 3983 108 111 3 chr5 107546594 107547233 -95538299 + HSMAR2 DNA Mariner 595 1302 0 24 0 0 0 chr5 107547578 107547602 -95537930 + AT_rich Low_complexity Low_complexity 1 24 0 3532 211 50 32 chr5 107549631 107550438 -95535094 - MER21B LTR ERV1 -9 854 34 1665 195 160 12 chr5 107550484 107550884 -95534648 - MLT1D LTR MaLR -46 459 1 23 0 0 0 chr5 107551383 107551406 -95534126 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 107551819 107551840 -95533692 + (TTA)n Simple_repeat Simple_repeat 1 21 0 713 311 51 4 chr5 107551844 107552079 -95533453 - MIR SINE MIR -11 251 6 23 97 0 0 chr5 107553070 107553142 -95532390 + AT_rich Low_complexity Low_complexity 1 72 0 194 150 25 0 chr5 107553184 107553224 -95532308 + CT-rich Low_complexity Low_complexity 4 44 0 7851 169 23 1 chr5 107553225 107554969 -95530563 - L1PA13 LINE L1 -1 6813 5024 294 29 0 0 chr5 107554969 107555004 -95530528 + (TG)n Simple_repeat Simple_repeat 1 35 0 7851 169 23 1 chr5 107555004 107555523 -95530009 - L1PA13 LINE L1 -1790 5024 4518 11325 164 24 82 chr5 107555637 107558940 -95526592 - L1PA13 LINE L1 -2243 4554 1439 1700 87 8 8 chr5 107558943 107559196 -95526336 + L1MA4A LINE L1 6047 6299 -4 575 214 162 13 chr5 107559197 107559426 -95526106 + L1MEc LINE L1 814 1076 -5320 204 184 13 40 chr5 107559496 107559572 -95525960 + (TATG)n Simple_repeat Simple_repeat 2 75 0 1582 207 34 14 chr5 107559663 107560021 -95525511 - MLT2D LTR ERVL -49 365 1 453 229 77 18 chr5 107560021 107560191 -95525341 + L1MEc LINE L1 1074 1253 -5143 863 331 107 45 chr5 107560192 107560285 -95525247 + L2 LINE L2 1922 2008 -1306 2511 71 0 0 chr5 107560285 107560595 -95524937 - AluY SINE Alu -1 310 1 863 331 107 45 chr5 107560595 107561317 -95524215 + L2 LINE L2 2008 2787 -527 291 114 0 0 chr5 107561607 107561651 -95523881 + (T)n Simple_repeat Simple_repeat 1 44 0 416 323 102 36 chr5 107561762 107562065 -95523467 + L2 LINE L2 2594 2916 -398 2278 147 23 33 chr5 107562187 107562894 -95522638 + L1P4 LINE L1 4950 5651 -523 212 309 143 0 chr5 107562923 107562949 -95522583 + L2 LINE L2 1780 1801 -1513 360 0 0 0 chr5 107562949 107562989 -95522543 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 212 309 143 0 chr5 107562989 107563088 -95522444 + L2 LINE L2 1801 1923 -1391 857 226 77 0 chr5 107563384 107563681 -95521851 - MER33 DNA MER1_type -4 320 1 1572 131 128 16 chr5 107563892 107564197 -95521335 + MER44D DNA MER2_type 1 609 0 2014 145 3 0 chr5 107566203 107566499 -95519033 - AluSg SINE Alu -13 297 1 2840 176 65 10 chr5 107566593 107566689 -95518843 - L1MA4 LINE L1 -7 6149 6054 1404 199 46 173 chr5 107566689 107567544 -95517988 - L1PA2 LINE L1 -95 6060 5315 13102 196 30 10 chr5 107567552 107571416 -95514116 - L1PA14 LINE L1 -10 6151 2221 1423 75 0 0 chr5 107571429 107571602 -95513930 - AluY SINE Alu -10 301 129 1407 199 58 24 chr5 107571603 107572014 -95513518 - L1MA4 LINE L1 -817 5329 4905 1149 192 122 58 chr5 107572308 107572651 -95512881 - MLT1A1 LTR MaLR 0 365 1 450 279 29 0 chr5 107573100 107573272 -95512260 - MER104 DNA Tc2 0 180 4 201 74 0 0 chr5 107573581 107573608 -95511924 + (A)n Simple_repeat Simple_repeat 1 27 0 24 0 0 0 chr5 107573714 107573738 -95511794 + AT_rich Low_complexity Low_complexity 1 24 0 387 306 81 0 chr5 107573839 107573999 -95511533 + MIR SINE MIR 89 261 -1 372 264 54 108 chr5 107574226 107574393 -95511139 + MIR SINE MIR 20 177 -85 14984 207 97 71 chr5 107574509 107576856 -95508676 - L1MA3 LINE L1 -14 6291 4008 804 164 0 22 chr5 107576856 107576990 -95508542 - FLAM_C SINE Alu -2 131 1 14984 207 97 71 chr5 107576990 107580766 -95504766 - L1MA3 LINE L1 -2297 4008 1 23 0 0 0 chr5 107582278 107582301 -95503231 + AT_rich Low_complexity Low_complexity 1 23 0 20264 170 21 11 chr5 107582364 107585687 -95499845 + L1M1 LINE L1 5 3291 -4274 2029 127 75 23 chr5 107585687 107586033 -95499499 - THE1B LTR MaLR 0 364 1 11273 106 8 1 chr5 107586033 107587603 -95497929 - THE1B-int LTR MaLR 0 1580 1 2005 143 79 18 chr5 107587603 107587946 -95497586 - THE1B LTR MaLR 0 364 1 20264 170 21 11 chr5 107587946 107589192 -95496340 + L1M1 LINE L1 3290 4621 -2944 1899 60 0 42 chr5 107589196 107589481 -95496051 + L1P LINE L1 2083 2355 -3791 4634 118 47 40 chr5 107589483 107590428 -95495104 - L1MA1 LINE L1 -62 6240 5290 691 217 30 4 chr5 107590554 107590784 -95494748 - L1 LINE L1 -3012 4553 4318 4245 157 17 24 chr5 107590822 107591723 -95493809 - L1 LINE L1 -4101 3464 2571 7183 21 9 1 chr5 107591725 107593152 -95492380 - L1PA3 LINE L1 0 6155 4716 8350 31 0 0 chr5 107593152 107594191 -95491341 + L1PA3 LINE L1 3658 4696 -1450 261 75 0 0 chr5 107594216 107594256 -95491276 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 5373 188 43 34 chr5 107594256 107595611 -95489921 - L1 LINE L1 -5027 2538 493 1980 249 45 23 chr5 107595608 107596206 -95489326 - L1 LINE L1 -6938 627 17 * 2134 117 10 0 chr5 107596230 107596530 -95489002 - AluSg SINE Alu -7 303 1 2646 164 95 34 chr5 107596581 107597141 -95488391 - LTR9 LTR ERV1 -18 594 1 24 32 0 0 chr5 107597174 107597205 -95488327 + AT_rich Low_complexity Low_complexity 1 31 0 6591 54 3 0 chr5 107597281 107598569 -95486963 - L1PA5 LINE L1 0 6154 4830 4335 120 250 72 chr5 107598569 107599895 -95485637 + pTR5 LTR ERV1 744 2438 0 31157 71 6 2 chr5 107599896 107604265 -95481267 - L1P LINE L1 -1310 4836 448 13264 184 27 15 chr5 107604368 107606600 -95478932 - L1M1 LINE L1 -720 7001 4718 2075 125 3 26 chr5 107606600 107606911 -95478621 - AluSx SINE Alu 0 312 9 13264 184 27 15 chr5 107606911 107608078 -95477454 - L1M1 LINE L1 -3003 4718 3566 * 17245 202 26 29 chr5 107608061 107614172 -95471360 - L1PA13 LINE L1 -12 7589 711 14003 167 35 63 chr5 107614275 107614925 -95470607 - L1M1 LINE L1 -4411 3154 2488 958 59 0 0 chr5 107614925 107615043 -95470489 - AluY SINE Alu -7 304 187 14003 167 35 63 chr5 107615043 107617503 -95468029 - L1M1 LINE L1 -5077 2488 15 10756 136 35 22 chr5 107617707 107618716 -95466816 - Tigger1 DNA MER2_type -4 2414 1420 6856 61 7 6 chr5 107618716 107619666 -95465866 + L1PA7 LINE L1 5203 6154 0 10756 136 35 22 chr5 107619666 107620191 -95465341 - Tigger1 DNA MER2_type -998 1420 846 2093 144 0 0 chr5 107620191 107620490 -95465042 - AluSc SINE Alu -10 299 1 10756 136 35 22 chr5 107620490 107620882 -95464650 - Tigger1 DNA MER2_type -1572 846 461 1916 196 13 0 chr5 107620884 107621267 -95464265 + L1P LINE L1 3943 4330 -1816 192 296 0 19 chr5 107621287 107621341 -95464191 + MIR SINE MIR 207 259 -3 23 54 0 0 chr5 107622228 107622265 -95463267 + AT_rich Low_complexity Low_complexity 1 37 0 1245 290 119 13 chr5 107622894 107623750 -95461782 - L2 LINE L2 0 3313 2367 407 295 0 0 chr5 107623863 107623975 -95461557 + MER63A DNA MER1_type 94 205 -5 807 178 6 35 chr5 107624966 107625135 -95460397 + MER3 DNA MER1_type 46 209 0 559 263 26 0 chr5 107625149 107625301 -95460231 + MER105 DNA DNA 8 163 -41 764 244 26 37 chr5 107625344 107625615 -95459917 - L1ME2 LINE L1 -135 6029 5762 501 247 133 0 chr5 107625604 107625883 -95459649 - L1M4 LINE L1 -2725 3421 3106 * 21 0 0 0 chr5 107625932 107625953 -95459579 + AT_rich Low_complexity Low_complexity 1 21 0 270 318 95 16 chr5 107625988 107626114 -95459418 - L2 LINE L2 0 3272 3137 802 174 0 8 chr5 107626139 107626271 -95459261 + FLAM_A SINE Alu 1 131 -2 1962 102 51 0 chr5 107628422 107628697 -95456835 + AluSg SINE Alu 16 304 -6 2296 82 3 55 chr5 107629300 107629630 -95455902 + AluSp SINE Alu 1 313 0 1567 94 20 4 chr5 107629719 107629973 -95455559 + L1PA15-16 LINE L1 1781 2038 -4811 * 7428 231 27 5 chr5 107629970 107632046 -95453486 + L1 LINE L1 2955 5076 -1773 1385 58 6 0 chr5 107632048 107632222 -95453310 + L1PA10 LINE L1 5990 6164 -4 4447 116 24 40 chr5 107632223 107632280 -95453252 + L1PA16 LINE L1 5384 5440 -726 1555 137 59 23 chr5 107632280 107632536 -95452996 + AluSx SINE Alu 24 288 -24 2342 64 3 0 chr5 107632546 107632866 -95452666 + AluY SINE Alu 1 321 0 4447 116 24 40 chr5 107632866 107633592 -95451940 + L1PA16 LINE L1 5449 6166 0 353 380 114 15 chr5 107633716 107634194 -95451338 + L1ME LINE L1 5255 5778 -386 298 271 102 55 chr5 107634567 107634822 -95450710 - HAL1 LINE L1 -13 2494 2228 1092 163 69 100 chr5 107634822 107635195 -95450337 + MLT2B1 LTR ERVL 1 378 -36 827 25 17 17 chr5 107635195 107635315 -95450217 + (TCTA)n Simple_repeat Simple_repeat 2 121 0 1092 163 69 100 chr5 107635315 107635351 -95450181 + MLT2B1 LTR ERVL 378 414 0 340 313 96 42 chr5 107635538 107635851 -95449681 - MLT1L LTR MaLR -81 534 205 461 213 92 62 chr5 107635856 107636128 -95449404 - HAL1 LINE L1 -1271 1236 957 2007 153 26 46 chr5 107636245 107636636 -95448896 - MLT1B LTR MaLR -5 385 3 1489 270 40 14 chr5 107636922 107637344 -95448188 - LTR16A LTR ERVL 0 450 18 559 253 81 20 chr5 107638497 107638695 -95446837 + MER112 DNA MER1_type 51 260 0 359 218 75 68 chr5 107639549 107639682 -95445850 + MER103 DNA DNA 13 146 -20 413 311 66 7 chr5 107639803 107639954 -95445578 - MIR SINE MIR -80 182 23 183 85 64 21 chr5 107640321 107640368 -95445164 + T-rich Low_complexity Low_complexity 3 51 0 7771 20 20 0 chr5 107640373 107641525 -95444007 - L1PA3 LINE L1 0 6155 4996 25 83 0 0 chr5 107641707 107641767 -95443765 + AT_rich Low_complexity Low_complexity 1 60 0 511 311 89 21 chr5 107642378 107642613 -95442919 - MIR SINE MIR 0 262 12 28 0 0 0 chr5 107642806 107642834 -95442698 + AT_rich Low_complexity Low_complexity 1 28 0 380 288 50 56 chr5 107643095 107643293 -95442239 + MER117 DNA MER1_type 1 197 0 2226 123 0 0 chr5 107644310 107644619 -95440913 - AluY SINE Alu -2 309 1 316 304 22 0 chr5 107644723 107644815 -95440717 - LTR67 LTR ERVL -36 521 428 326 223 68 19 chr5 107644841 107644944 -95440588 + L1MC5 LINE L1 7423 7530 -431 281 285 30 67 chr5 107645031 107645196 -95440336 + L1ME3A LINE L1 5959 6117 -53 314 225 142 58 chr5 107646084 107646204 -95439328 + MLT1K LTR MaLR 443 572 -16 239 322 26 0 chr5 107646677 107646792 -95438740 + MLT1E-int LTR MaLR 1254 1371 0 780 180 21 25 chr5 107646792 107646982 -95438550 + MLT1E LTR MaLR 1 186 -356 429 224 0 0 chr5 107647192 107647277 -95438255 - MLT2F LTR ERVL -576 87 3 469 230 32 0 chr5 107647280 107647406 -95438126 - L1MC5 LINE L1 -873 7088 6959 * 2694 179 26 19 chr5 107647398 107647979 -95437553 - L1MC3 LINE L1 0 7785 7201 240 302 35 12 chr5 107647993 107648079 -95437453 - MLT1F1 LTR MaLR -443 124 37 330 148 0 0 chr5 107648080 107648134 -95437398 - L1MC3 LINE L1 -687 7098 7045 2186 93 3 3 chr5 107648137 107648426 -95437106 - AluSg SINE Alu -15 295 7 2012 213 13 30 chr5 107648474 107648920 -95436612 - L1MC3 LINE L1 -1767 6018 5579 2064 187 84 22 chr5 107648920 107649370 -95436162 + MER66A LTR ERV1 1 478 0 2012 213 13 30 chr5 107649370 107649387 -95436145 - L1MC3 LINE L1 -2206 5579 5563 6838 177 50 31 chr5 107649390 107651361 -95434171 + MER66A-int LTR ERV1 67 2162 -4514 5193 232 84 72 chr5 107651331 107653460 -95432072 + MER66A-int LTR ERV1 2315 4469 -2207 * 1681 209 60 6 chr5 107653460 107653824 -95431708 + MER66A LTR ERV1 95 478 0 791 152 58 0 chr5 107653824 107653962 -95431570 - L1MC3 LINE L1 -2204 5581 5436 2146 198 71 48 chr5 107653968 107654528 -95431004 - MER34C LTR ERV1 -12 573 1 4067 229 36 29 chr5 107654530 107654607 -95430925 - L1MC3 LINE L1 -746 5400 5325 1407 230 91 62 chr5 107654607 107655233 -95430299 - LTR48B LTR ERV1 0 644 1 4067 229 36 29 chr5 107655233 107656561 -95428971 - L1MC3 LINE L1 -821 5325 4019 2106 183 128 81 chr5 107656561 107656769 -95428763 + LTR8A LTR ERV1 1 198 -529 3612 53 0 2 chr5 107656769 107657218 -95428314 - LTR7 LTR ERV1 -2 448 1 2106 183 128 81 chr5 107657218 107657702 -95427830 + LTR8A LTR ERV1 198 726 -1 1689 211 126 21 chr5 107657711 107658283 -95427249 - L1MC3 LINE L1 -2133 4013 3382 2528 214 118 1 chr5 107658296 107658950 -95426582 + LTR48 LTR ERV1 22 751 -36 1967 251 21 9 chr5 107658993 107659662 -95425870 - L1MC3 LINE L1 -2767 3379 2703 321 360 7 60 chr5 107659698 107659848 -95425684 + L2 LINE L2 3115 3256 -16 1190 232 112 3 chr5 107660114 107660399 -95425133 + MSTB2 LTR MaLR 1 316 -141 206 318 95 54 chr5 107661351 107661499 -95424033 + MIR SINE MIR 59 212 -50 21 0 0 0 chr5 107661978 107661999 -95423533 + AT_rich Low_complexity Low_complexity 1 21 0 263 332 49 104 chr5 107662862 107663169 -95422363 - L2 LINE L2 -50 3222 2933 183 342 132 26 chr5 107663207 107663397 -95422135 - L2 LINE L2 -467 2847 2638 2346 211 65 147 chr5 107663405 107665286 -95420246 - MER52A LTR ERV1 0 1755 29 2744 122 104 52 chr5 107665286 107665872 -95419660 + pTR5 LTR ERV1 1231 2025 -413 308 268 10 0 chr5 107665873 107665970 -95419562 + LTR30 LTR ERV1 545 642 -80 1543 74 0 9 chr5 107665973 107666189 -95419343 + pTR5 LTR ERV1 172 385 -2053 660 258 13 0 chr5 107666190 107666341 -95419191 - MER52A LTR ERV1 -1228 527 375 * 721 208 40 104 chr5 107666331 107666581 -95418951 - MER52A LTR ERV1 -1520 235 2 308 323 16 31 chr5 107666879 107667006 -95418526 + MIR3 SINE MIR 44 168 -40 1529 134 11 4 chr5 107667074 107667342 -95418190 + L1MA5A LINE L1 6023 6292 -5 22 35 0 0 chr5 107668340 107668369 -95417163 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 107671440 107671472 -95414060 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 107671824 107671852 -95413680 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 107672519 107672542 -95412990 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 107672788 107672820 -95412712 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr5 107673011 107673041 -95412491 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 107673242 107673270 -95412262 + AT_rich Low_complexity Low_complexity 1 28 0 181 280 80 0 chr5 107673270 107673320 -95412212 - L2 LINE L2 -4 3268 3215 234 329 14 0 chr5 107674256 107674326 -95411206 + L2 LINE L2 3201 3271 -1 359 161 0 25 chr5 107674976 107675057 -95410475 + CT-rich Low_complexity Low_complexity 4 82 0 288 0 0 0 chr5 107675374 107675406 -95410126 + (CA)n Simple_repeat Simple_repeat 2 33 0 1641 81 9 9 chr5 107675475 107675698 -95409834 - AluSg/x SINE Alu -4 306 84 22 56 0 0 chr5 107676299 107676335 -95409197 + AT_rich Low_complexity Low_complexity 1 36 0 301 218 83 115 chr5 107676625 107676781 -95408751 + MIR SINE MIR 41 191 -71 777 240 29 0 chr5 107677162 107677337 -95408195 + LTR16C LTR ERVL 310 489 -2 316 383 24 0 chr5 107677538 107677705 -95407827 - L2 LINE L2 -235 3037 2867 1633 292 57 57 chr5 107678332 107678914 -95406618 + MER115 DNA AcHobo 111 692 -1 829 204 12 12 chr5 107680573 107680735 -95404797 - FRAM SINE Alu -14 162 1 275 237 76 51 chr5 107681158 107681276 -95404256 - LTR50 LTR ERVL -633 162 42 2859 304 65 21 chr5 107681365 107682507 -95403025 - ERVL LTR ERVL -2428 3336 2145 985 205 15 10 chr5 107682606 107682801 -95402731 - LTR52 LTR ERVL -9 412 217 3394 113 30 69 chr5 107682811 107683224 -95402308 - L1MA8 LINE L1 -118 6173 5792 3952 54 104 0 chr5 107683224 107683763 -95401769 - L1PA6 LINE L1 -1 6153 5559 3394 113 30 69 chr5 107683763 107683989 -95401543 - L1MA8 LINE L1 -499 5792 5559 718 195 130 20 chr5 107683990 107684190 -95401342 - LTR52 LTR ERVL -199 222 1 24 0 0 0 chr5 107684462 107684486 -95401046 + AT_rich Low_complexity Low_complexity 1 24 0 266 333 0 9 chr5 107684945 107685059 -95400473 - ERVL LTR ERVL -4496 1158 1046 1682 186 84 43 chr5 107685147 107685589 -95399943 - L1ME1 LINE L1 -133 6033 5574 328 314 88 6 chr5 107685634 107685793 -95399739 - ERVL LTR ERVL -4719 1045 874 368 279 140 44 chr5 107687326 107687575 -95397957 + MER102b DNA MER1_type 45 341 0 22 0 0 0 chr5 107689137 107689159 -95396373 + AT_rich Low_complexity Low_complexity 1 22 0 519 254 8 67 chr5 107689227 107689361 -95396171 + MIR SINE MIR 2 127 -135 236 260 40 70 chr5 107690025 107690125 -95395407 + L2 LINE L2 2595 2691 -623 1713 180 0 10 chr5 107690185 107690485 -95395047 - AluJo SINE Alu 0 312 16 233 356 153 28 chr5 107691299 107691619 -95393913 + L2 LINE L2 2947 3306 -7 25 0 0 0 chr5 107691648 107691673 -95393859 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr5 107692139 107692175 -95393357 + AT_rich Low_complexity Low_complexity 1 36 0 295 295 0 25 chr5 107692940 107693062 -95392470 + L1MA9 LINE L1 6156 6274 -38 195 339 18 36 chr5 107694755 107694867 -95390665 + MIR SINE MIR 83 192 -70 208 378 82 30 chr5 107694914 107695049 -95390483 + L2 LINE L2 3129 3270 -2 465 332 18 62 chr5 107695099 107695325 -95390207 - L2 LINE L2 0 3272 3057 308 267 111 47 chr5 107695529 107695701 -95389831 + L2 LINE L2 3123 3305 -8 184 216 27 0 chr5 107696594 107696631 -95388901 + L2 LINE L2 3268 3305 -8 26 50 0 0 chr5 107697227 107697267 -95388265 + AT_rich Low_complexity Low_complexity 1 40 0 276 30 0 0 chr5 107698829 107698862 -95386670 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 80 0 0 chr5 107698862 107698887 -95386645 + (GA)n Simple_repeat Simple_repeat 2 26 0 1367 200 62 25 chr5 107698948 107699268 -95386264 - MLT1A2 LTR MaLR -42 332 1 203 132 53 0 chr5 107699316 107699354 -95386178 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 555 242 118 0 chr5 107700142 107700295 -95385237 + MER112 DNA MER1_type 89 259 -1 817 163 0 0 chr5 107701327 107701456 -95384076 + FLAM_C SINE Alu 3 131 -2 13274 149 15 14 chr5 107701580 107703848 -95381684 - L1PA12 LINE L1 -4266 3318 1039 6339 87 13 0 chr5 107703848 107705302 -95380230 + L1PA14 LINE L1 4718 6158 -3 378 233 68 14 chr5 107705303 107705449 -95380083 - HAL1b LINE L1 -17 1331 1178 2022 125 0 0 chr5 107705726 107706006 -95379526 + AluSg SINE Alu 1 280 -30 253 299 110 29 chr5 107706034 107706315 -95379217 + L1ME4a LINE L1 5694 5997 -124 386 326 68 24 chr5 107707186 107707461 -95378071 + MER90 LTR ERV1 302 563 -12 1575 269 23 5 chr5 107708267 107708653 -95376879 - L1PA12 LINE L1 -6152 1429 1037 * 2976 175 13 21 chr5 107708651 107709689 -95375843 + L1P4 LINE L1 4718 5738 -423 276 30 0 0 chr5 107710702 107710735 -95374797 + (TG)n Simple_repeat Simple_repeat 1 33 0 189 107 0 0 chr5 107710735 107710763 -95374769 + (GA)n Simple_repeat Simple_repeat 2 29 0 472 246 0 24 chr5 107710828 107710954 -95374578 - MLT1A2 LTR MaLR -51 323 201 588 195 8 23 chr5 107712225 107712353 -95373179 - LTR52 LTR ERVL -77 344 219 2428 193 28 47 chr5 107712365 107712779 -95372753 - L1MA8 LINE L1 -118 6173 5773 1747 161 3 6 chr5 107712779 107713109 -95372423 - L1PA6 LINE L1 0 6154 5826 2428 193 28 47 chr5 107713109 107713311 -95372221 - L1MA8 LINE L1 -518 5773 5569 1418 95 8 9 chr5 107713461 107713719 -95371813 + pTR5 LTR ERV1 28 385 -2053 613 271 13 0 chr5 107713720 107713871 -95371661 - MER52A LTR ERV1 -1228 527 375 * 683 215 40 108 chr5 107713861 107714112 -95371420 - MER52A LTR ERV1 -1520 235 2 312 315 16 31 chr5 107714412 107714539 -95370993 + MIR3 SINE MIR 44 168 -40 1078 224 11 4 chr5 107714607 107714875 -95370657 + L1MA5A LINE L1 6023 6292 -5 2431 236 19 44 chr5 107715032 107716288 -95369244 - MER66-int LTR ERV1 -2542 4134 2809 378 57 0 0 chr5 107716488 107716541 -95368991 + (TC)n Simple_repeat Simple_repeat 1 53 0 905 329 53 8 chr5 107716541 107717033 -95368499 - L1MC/D LINE L1 -2012 5796 5283 304 300 60 76 chr5 107717045 107717415 -95368117 - L1MC/D LINE L1 -877 5269 4906 2171 219 107 35 chr5 107718185 107718929 -95366603 + MER52A LTR ERV1 1 900 -855 203 278 37 0 chr5 107720099 107720153 -95365379 - MIR SINE MIR -11 251 196 265 247 21 43 chr5 107720409 107720502 -95365030 + L3 LINE CR1 1171 1261 -316 222 118 0 0 chr5 107720553 107720587 -95364945 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 224 281 0 0 chr5 107720688 107720752 -95364780 + L3 LINE CR1 1269 1332 -245 4137 291 31 17 chr5 107721566 107723438 -95362094 + L1 LINE L1 2252 4150 -1996 382 247 149 29 chr5 107723545 107723719 -95361813 - LTR52 LTR ERVL -226 195 1 24 0 0 0 chr5 107723995 107724019 -95361513 + AT_rich Low_complexity Low_complexity 1 24 0 1047 213 90 52 chr5 107724686 107725052 -95360480 - L1ME2 LINE L1 -137 6029 5650 231 259 17 0 chr5 107725222 107725280 -95360252 - L1MA4 LINE L1 -295 6005 5947 611 213 96 21 chr5 107725293 107725481 -95360051 - L1MA4 LINE L1 -568 5615 5414 276 323 168 19 chr5 107725501 107725662 -95359870 - MIR SINE MIR -60 202 18 207 300 71 0 chr5 107725864 107725934 -95359598 - L2 LINE L2 -1 3312 3238 892 182 23 18 chr5 107727226 107727446 -95358086 + L1MA10 LINE L1 6112 6332 -2 982 252 31 42 chr5 107727625 107727911 -95357621 + MLT1E2 LTR MaLR 325 607 -19 237 229 0 0 chr5 107728276 107728337 -95357195 + L1PB2 LINE L1 6082 6142 -9 24 0 0 0 chr5 107728764 107728788 -95356744 + AT_rich Low_complexity Low_complexity 1 24 0 41 48 0 0 chr5 107728934 107728996 -95356536 + AT_rich Low_complexity Low_complexity 1 62 0 2249 144 8 8 chr5 107729743 107730118 -95355414 + THE1C LTR MaLR 1 375 0 222 91 0 0 chr5 107730716 107730749 -95354783 + (CA)n Simple_repeat Simple_repeat 2 34 0 294 244 122 0 chr5 107731766 107731848 -95353684 + L2 LINE L2 3180 3271 -1 561 293 12 18 chr5 107732282 107732449 -95353083 - LTR33 LTR ERVL -306 215 50 254 360 43 7 chr5 107732574 107732713 -95352819 - L2 LINE L2 -2 3311 3168 22 56 0 0 chr5 107733188 107733224 -95352308 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 107734611 107734635 -95350897 + AT_rich Low_complexity Low_complexity 1 24 0 610 331 21 0 chr5 107735448 107735690 -95349842 - L1ME LINE L1 -379 5791 5545 195 247 10 124 chr5 107735701 107735798 -95349734 + MER5B DNA MER1_type 19 104 -74 2468 133 114 163 chr5 107735798 107736951 -95348581 - pTR5 LTR ERV1 0 2438 66 2118 109 0 0 chr5 107737173 107737456 -95348076 - AluSg SINE Alu -25 285 3 21 0 0 0 chr5 107738552 107738573 -95346959 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 107738723 107738754 -95346778 + AT_rich Low_complexity Low_complexity 1 31 0 4645 173 50 0 chr5 107739078 107740011 -95345521 - L1 LINE L1 -960 5186 4207 4273 197 12 26 chr5 107740010 107740983 -95344549 + L1MA4 LINE L1 5333 6292 -8 * 345 24 0 0 chr5 107741052 107741094 -95344438 + (TG)n Simple_repeat Simple_repeat 1 42 0 190 281 37 104 chr5 107742085 107742220 -95343312 + MIR SINE MIR 21 146 -116 2106 167 13 26 chr5 107742220 107742604 -95342928 + MLT1B LTR MaLR 1 379 -11 198 0 0 0 chr5 107743783 107743805 -95341727 + (T)n Simple_repeat Simple_repeat 1 22 0 473 143 0 22 chr5 107744203 107744294 -95341238 - AluY SINE Alu -205 106 18 564 311 79 32 chr5 107744553 107744894 -95340638 - L2 LINE L2 -5 3308 2952 245 310 35 0 chr5 107745151 107745238 -95340294 - MLT1L LTR MaLR -339 276 187 285 258 86 97 chr5 107745292 107745478 -95340054 - MLT1L LTR MaLR -424 191 8 344 316 104 9 chr5 107745497 107745760 -95339772 - L2 LINE L2 -353 2919 2635 2886 118 0 26 chr5 107746204 107746671 -95338861 - L1MA4A LINE L1 -5 6298 5844 197 268 0 0 chr5 107746708 107746749 -95338783 + L2 LINE L2 3256 3296 -17 180 0 0 0 chr5 107748278 107748298 -95337234 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 413 328 39 33 chr5 107748709 107748889 -95336643 + MER5A DNA MER1_type 7 187 -2 31 0 0 0 chr5 107749295 107749326 -95336206 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 107749476 107749497 -95336035 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 107749999 107750028 -95335504 + AT_rich Low_complexity Low_complexity 1 29 0 2280 88 0 0 chr5 107750592 107750875 -95334657 + AluSg SINE Alu 3 285 -25 395 268 24 16 chr5 107751663 107751786 -95333746 - L2 LINE L2 -2 3270 3147 447 268 22 77 chr5 107752909 107753092 -95332440 - L2 LINE L2 -2 3270 3098 237 354 10 0 chr5 107754457 107754553 -95330979 - MLT1K LTR MaLR -361 227 131 241 257 43 29 chr5 107754720 107754790 -95330742 - MIR SINE MIR -20 242 172 344 263 0 0 chr5 107755561 107755637 -95329895 - MIR SINE MIR -67 141 66 190 345 46 0 chr5 107755653 107755740 -95329792 + L2 LINE L2 3223 3313 0 1833 165 0 34 chr5 107756302 107756659 -95328873 + L1MA4A LINE L1 5954 6298 -5 314 322 46 58 chr5 107757100 107757367 -95328165 + L2 LINE L2 2659 2919 -353 268 274 75 86 chr5 107757386 107757572 -95327960 + MLT1L LTR MaLR 8 191 -424 620 321 79 29 chr5 107757970 107758310 -95327222 + L2 LINE L2 2952 3308 -5 187 362 14 0 chr5 107758311 107758380 -95327152 - MIR SINE MIR -187 75 6 2312 67 0 0 chr5 107758569 107758851 -95326681 + AluY SINE Alu 18 299 -12 1154 131 63 10 chr5 107759348 107759554 -95325978 - Tigger1 DNA MER2_type 0 2418 2202 882 171 6 13 chr5 107759543 107759701 -95325831 - Tigger1 DNA MER2_type -2261 157 1 * 530 292 129 0 chr5 107759806 107759977 -95325555 + MIR SINE MIR 14 206 -56 549 234 156 22 chr5 107759979 107760248 -95325284 - MER5C DNA MER1_type -1 323 19 985 102 0 22 chr5 107760575 107760712 -95324820 - AluSq/x SINE Alu -179 134 1 287 238 99 59 chr5 107760917 107761018 -95324514 + MIR SINE MIR 66 170 -92 2420 62 3 3 chr5 107761370 107761674 -95323858 + AluY SINE Alu 1 304 -7 2475 85 0 0 chr5 107762255 107762560 -95322972 - AluSq SINE Alu 0 313 9 283 360 149 21 chr5 107762791 107763080 -95322452 - L2 LINE L2 -739 2575 2250 25 31 0 0 chr5 107763189 107763221 -95322311 + AT_rich Low_complexity Low_complexity 1 32 0 2011 147 36 29 chr5 107763221 107763637 -95321895 - L1MA3 LINE L1 0 6305 5887 24 0 0 0 chr5 107763645 107763669 -95321863 + AT_rich Low_complexity Low_complexity 1 24 0 211 24 122 0 chr5 107763679 107763720 -95321812 + T-rich Low_complexity Low_complexity 2 47 0 9856 25 1 0 chr5 107763724 107765663 -95319869 - L1PA3 LINE L1 0 6155 4216 180 0 0 0 chr5 107767278 107767298 -95318234 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1306 197 60 65 chr5 107768107 107768477 -95317055 + MLT1A2 LTR MaLR 3 370 -4 25 51 0 0 chr5 107768685 107768724 -95316808 + AT_rich Low_complexity Low_complexity 1 39 0 545 204 56 0 chr5 107768907 107769015 -95316517 - MER81 DNA DNA 0 114 1 230 346 39 0 chr5 107769154 107769232 -95316300 - MIR3 SINE MIR -5 203 123 555 54 54 0 chr5 107769322 107769396 -95316136 - MADE1 DNA Mariner -2 78 1 1558 150 8 0 chr5 107769479 107769726 -95315806 - AluJb SINE Alu 0 312 64 305 274 36 101 chr5 107770020 107770155 -95315377 + L1ME4a LINE L1 5844 5961 -160 2184 122 3 0 chr5 107770155 107770450 -95315082 + AluSg SINE Alu 1 296 -14 305 274 36 101 chr5 107770450 107770533 -95314999 + L1ME4a LINE L1 5961 6048 -73 1110 51 0 0 chr5 107771125 107771263 -95314269 - L1PA6 LINE L1 -691 5463 5326 5482 56 1 3 chr5 107771266 107771959 -95313573 + L1PA6 LINE L1 5463 6154 0 316 322 13 92 chr5 107773685 107773912 -95311620 + HAL1 LINE L1 2252 2460 -47 249 356 0 19 chr5 107775178 107775282 -95310250 + MIR SINE MIR 46 147 -61 969 233 48 70 chr5 107775832 107776046 -95309486 - MLT1E LTR MaLR -270 323 117 2077 125 19 19 chr5 107776046 107776358 -95309174 + AluSx SINE Alu 1 312 0 969 233 48 70 chr5 107776358 107776473 -95309059 - MLT1E LTR MaLR -476 117 1 812 160 0 0 chr5 107776833 107776964 -95308568 + FAM SINE Alu 40 170 -15 765 246 176 17 chr5 107779325 107779682 -95305850 - LTR16A1 LTR ERVL 0 457 44 519 308 44 38 chr5 107779688 107779931 -95305601 - MIR SINE MIR 0 262 16 383 355 85 34 chr5 107780172 107780445 -95305087 + L2 LINE L2 2806 3114 -199 227 0 91 0 chr5 107780445 107780478 -95305054 + T-rich Low_complexity Low_complexity 1 36 0 383 355 85 34 chr5 107780478 107780674 -95304858 + L2 LINE L2 3114 3299 -14 22 0 0 0 chr5 107781544 107781566 -95303966 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 107781717 107781739 -95303793 + AT_rich Low_complexity Low_complexity 1 22 0 1920 203 0 11 chr5 107782305 107782674 -95302858 + MLT1A1 LTR MaLR 1 365 0 250 333 117 8 chr5 107782716 107782836 -95302696 + MER94 DNA DNA 2 134 0 301 258 0 0 chr5 107783042 107783108 -95302424 - L2 LINE L2 -1 3312 3247 295 314 0 20 chr5 107785537 107785639 -95299893 + L3 LINE CR1 1162 1261 -316 339 167 0 0 chr5 107785658 107785724 -95299808 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 230 268 14 0 chr5 107785817 107785888 -95299644 + L3 LINE CR1 1261 1332 -245 245 210 14 14 chr5 107787055 107787178 -95298354 + GA-rich Low_complexity Low_complexity 1 123 0 772 295 16 94 chr5 107787904 107788005 -95297527 + L1MEc LINE L1 37 144 -6252 2292 123 0 0 chr5 107788005 107788314 -95297218 + AluSx SINE Alu 1 309 -3 772 295 16 94 chr5 107788314 107788829 -95296703 + L1MEc LINE L1 144 605 -5791 312 293 9 26 chr5 107790590 107790706 -95294826 + GA-rich Low_complexity Low_complexity 4 117 0 1088 278 130 5 chr5 107790996 107791381 -95294151 - MLT1J LTR MaLR 0 511 79 1238 226 24 24 chr5 107792576 107792868 -95292664 - MLT1E2 LTR MaLR -10 616 325 1135 137 32 14 chr5 107793047 107793266 -95292266 - L1MA10 LINE L1 0 6334 6112 269 343 84 56 chr5 107796451 107796772 -95288760 + L2 LINE L2 2539 2868 -446 21 0 0 0 chr5 107797092 107797113 -95288419 + AT_rich Low_complexity Low_complexity 1 21 0 344 365 82 12 chr5 107797276 107797446 -95288086 - MIR3 SINE MIR -7 201 20 311 315 57 68 chr5 107798167 107798535 -95286997 - L1 LINE L1 -841 5305 4942 1534 203 47 44 chr5 107800140 107800525 -95285007 - MSTD LTR MaLR 0 396 11 7127 192 120 21 chr5 107801313 107802909 -95282623 + MER52A LTR ERV1 1 1755 0 5383 119 11 8 chr5 107803573 107804594 -95280938 + L1MA1 LINE L1 5101 6124 -178 723 168 0 0 chr5 107804800 107804931 -95280601 + L1PB2 LINE L1 6012 6142 -9 24 0 0 0 chr5 107805354 107805378 -95280154 + AT_rich Low_complexity Low_complexity 1 24 0 242 172 35 23 chr5 107805509 107805596 -95279936 + (TTA)n Simple_repeat Simple_repeat 3 90 0 193 345 63 14 chr5 107805627 107805769 -95279763 + L2 LINE L2 1873 2021 -1293 762 287 0 64 chr5 107806406 107806657 -95278875 + MIR SINE MIR 3 237 -25 703 261 128 35 chr5 107807192 107807598 -95277934 - LTR33 LTR ERVL -25 496 53 246 363 40 8 chr5 107807726 107807850 -95277682 - L2 LINE L2 -2 3311 3184 22 56 0 0 chr5 107808337 107808373 -95277159 + AT_rich Low_complexity Low_complexity 1 36 0 297 0 0 0 chr5 107808721 107808754 -95276778 + (TG)n Simple_repeat Simple_repeat 2 34 0 439 295 67 117 chr5 107808794 107809180 -95276352 - L2 LINE L2 -2 3270 2904 365 288 28 23 chr5 107810093 107810223 -95275309 + MIR SINE MIR 30 158 -61 1024 326 56 34 chr5 107811818 107812404 -95273128 + HAL1b LINE L1 47 645 -703 1507 213 103 106 chr5 107812696 107813300 -95272232 + L1MC5 LINE L1 6488 7092 -869 2247 98 3 7 chr5 107813300 107813607 -95271925 - AluSg SINE Alu -4 306 1 1507 213 103 106 chr5 107813607 107813771 -95271761 + L1MC5 LINE L1 7092 7255 -706 360 0 0 0 chr5 107813771 107813811 -95271721 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 1507 213 103 106 chr5 107813811 107814008 -95271524 + L1MC5 LINE L1 7255 7461 -500 1870 126 57 20 chr5 107814008 107814309 -95271223 + AluSx SINE Alu 1 312 0 1507 213 103 106 chr5 107814309 107814377 -95271155 + L1MC5 LINE L1 7461 7528 -433 605 189 97 120 chr5 107814972 107815085 -95270447 + L1MC5 LINE L1 7156 7270 -691 360 0 0 0 chr5 107815085 107815125 -95270407 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 605 189 97 120 chr5 107815125 107815322 -95270210 + L1MC5 LINE L1 7270 7458 -503 2112 100 57 13 chr5 107815322 107815621 -95269911 + AluSx SINE Alu 1 312 0 605 189 97 120 chr5 107815621 107815691 -95269841 + L1MC5 LINE L1 7458 7528 -433 442 282 27 77 chr5 107815785 107816005 -95269527 + L1ME3A LINE L1 5962 6170 0 29 90 0 0 chr5 107816849 107816927 -95268605 + AT_rich Low_complexity Low_complexity 1 78 0 361 260 136 59 chr5 107817586 107817755 -95267777 + MIR SINE MIR 20 201 -61 1670 221 76 48 chr5 107817963 107818664 -95266868 - L1M4 LINE L1 -2977 3169 2450 228 244 122 12 chr5 107819320 107819402 -95266130 - L1 LINE L1 -3406 2740 2650 6439 198 116 25 chr5 107820371 107821939 -95263593 + MER52A LTR ERV1 46 1755 0 894 199 6 0 chr5 107821941 107822112 -95263420 + MER52A-int LTR ERV1 4 175 -6916 705 82 0 0 chr5 107822112 107822209 -95263323 + AluY SINE Alu 1 97 -214 6480 206 25 28 chr5 107822375 107823944 -95261588 + MER52A LTR ERV1 46 1755 0 3416 134 19 21 chr5 107823946 107824117 -95261415 + MER52A-int LTR ERV1 4 174 -6917 2352 99 0 0 chr5 107824117 107824420 -95261112 + AluY SINE Alu 1 303 -8 3416 134 19 21 chr5 107824420 107824742 -95260790 + MER52A-int LTR ERV1 174 498 -6593 2502 64 0 0 chr5 107824742 107825038 -95260494 + AluY SINE Alu 1 296 -15 3416 134 19 21 chr5 107825038 107825112 -95260420 + MER52A-int LTR ERV1 498 571 -6520 3399 191 18 1 chr5 107825228 107825910 -95259622 + MER52A-int LTR ERV1 1698 2390 -4701 1741 252 24 42 chr5 107826108 107826276 -95259256 + LTR19-int LTR ERV1 6 175 -6916 1070 263 7 10 chr5 107826276 107826569 -95258963 + AluY SINE Alu 2 293 -8 1741 252 24 42 chr5 107826569 107826901 -95258631 + LTR19-int LTR ERV1 175 497 -6594 1949 132 0 0 chr5 107826901 107827197 -95258335 + AluY SINE Alu 1 296 -15 1741 252 24 42 chr5 107827197 107827271 -95258261 + LTR19-int LTR ERV1 497 571 -6520 9536 143 4 3 chr5 107827387 107828889 -95256643 + LTR19-int LTR ERV1 1698 3201 -3890 4931 153 19 22 chr5 107828889 107829823 -95255709 + LTR19-int LTR ERV1 717 1792 -5413 718 129 32 45 chr5 107829885 107830040 -95255492 + LTR19-int LTR ERV1 990 1142 -4804 2752 140 53 25 chr5 107830042 107830793 -95254739 + LTR19-int LTR ERV1 1416 3677 -3580 1709 142 17 31 chr5 107830802 107831154 -95254378 + LTR19-int LTR ERV1 3936 4282 -3255 * 1840 130 28 0 chr5 107831146 107831469 -95254063 + LTR19-int LTR ERV1 4643 4974 -2563 1033 271 98 31 chr5 107831469 107832153 -95253379 - L1MEc LINE L1 -4296 2100 1371 29 28 0 0 chr5 107832389 107832425 -95253107 + AT_rich Low_complexity Low_complexity 1 36 0 480 209 0 0 chr5 107832787 107832873 -95252659 + MER20 DNA MER1_type 2 87 -132 1887 140 38 32 chr5 107832875 107833217 -95252315 - THE1B LTR MaLR 0 364 21 23 33 0 0 chr5 107834553 107834583 -95250949 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr5 107835368 107835403 -95250129 + (TG)n Simple_repeat Simple_repeat 2 36 0 43 76 0 0 chr5 107835627 107835719 -95249813 + AT_rich Low_complexity Low_complexity 1 92 0 7880 124 4 0 chr5 107835863 107837128 -95248404 + L1PA7 LINE L1 1485 2754 -3392 7348 40 0 0 chr5 107837126 107838535 -95246997 + L1PA4 LINE L1 4750 6150 -5 17563 94 7 0 chr5 107838555 107841935 -95243597 + L1PA7 LINE L1 2740 6154 0 216 0 0 0 chr5 107842111 107842135 -95243397 + (TC)n Simple_repeat Simple_repeat 1 24 0 345 186 0 0 chr5 107843850 107843909 -95241623 + L2 LINE L2 3255 3313 0 216 0 0 0 chr5 107844318 107844342 -95241190 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 325 333 78 50 chr5 107845200 107845599 -95239933 + L2 LINE L2 2296 2705 -609 1472 169 48 4 chr5 107845683 107845931 -95239601 - AluJb SINE Alu -13 299 41 305 336 112 8 chr5 107846093 107846218 -95239314 + L2 LINE L2 2924 3061 -211 571 286 69 61 chr5 107846253 107846906 -95238626 + HAL1 LINE L1 1717 2374 -133 204 200 107 27 chr5 107846921 107846996 -95238536 - MER91C DNA MER1_type -22 118 38 238 227 76 0 chr5 107847039 107847105 -95238427 + HAL1 LINE L1 2417 2487 -20 2268 102 7 0 chr5 107847183 107847476 -95238056 + AluSx SINE Alu 2 296 -16 297 289 100 34 chr5 107847891 107848130 -95237402 + MLT1L LTR MaLR 1 255 -360 565 294 9 23 chr5 107848862 107849080 -95236452 - L1ME LINE L1 -522 5642 5428 458 311 94 8 chr5 107849717 107849984 -95235548 - LTR33 LTR ERVL -2 519 230 207 167 42 0 chr5 107850299 107850347 -95235185 + T-rich Low_complexity Low_complexity 3 52 0 206 64 0 85 chr5 107850552 107850599 -95234933 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 549 223 33 8 chr5 107851395 107851516 -95234016 - L2 LINE L2 0 3313 3190 298 280 116 43 chr5 107851619 107851836 -95233696 + L1ME LINE L1 4490 4741 -1405 2062 139 144 3 chr5 107851836 107852210 -95233322 + MSTA LTR MaLR 1 427 -1 298 280 116 43 chr5 107852210 107852321 -95233211 + L1ME LINE L1 4741 4842 -1304 6301 77 6 17 chr5 107852482 107853316 -95232216 + LTR12 LTR ERV1 1 825 -1 1355 114 14 14 chr5 107853333 107853553 -95231979 + HERV9 LTR ERV1 43 262 -8137 51314 86 9 8 chr5 107853553 107861478 -95224054 + HERV9 LTR ERV1 382 8399 0 5435 67 1 27 chr5 107861478 107862184 -95223348 + LTR12 LTR ERV1 1 688 0 448 266 87 29 chr5 107862196 107862755 -95222777 + L1ME LINE L1 5113 5696 -474 609 138 0 0 chr5 107862794 107862881 -95222651 + AluJ/FLAM SINE Alu 3 89 -223 22 70 0 0 chr5 107863789 107863832 -95221700 + AT_rich Low_complexity Low_complexity 1 43 0 36304 78 6 8 chr5 107863845 107869104 -95216428 + L1P LINE L1 13 5262 -884 3546 216 14 26 chr5 107869929 107870885 -95214647 + L1MA4 LINE L1 5349 6292 -8 345 24 0 0 chr5 107870954 107870996 -95214536 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 292 106 9 chr5 107872136 107872249 -95213283 + L1ME LINE L1 10 133 -5986 * 345 302 19 0 chr5 107872230 107872336 -95213196 + L1ME LINE L1 5101 5208 -921 360 262 69 28 chr5 107872355 107872592 -95212940 + L1ME LINE L1 5238 5479 -674 676 301 105 19 chr5 107872597 107873026 -95212506 + MER34 LTR ERV1 1 466 -76 284 214 83 24 chr5 107873085 107873169 -95212363 + L1ME LINE L1 5491 5579 -574 430 239 132 83 chr5 107873169 107873482 -95212050 + MER34 LTR ERV1 1 364 -221 316 239 22 11 chr5 107873619 107873711 -95211821 + MER34 LTR ERV1 450 542 0 230 217 0 0 chr5 107873714 107873760 -95211772 + L1ME LINE L1 5579 5624 -480 263 89 22 22 chr5 107873795 107873840 -95211692 + MER4A LTR ERV1 54 98 -566 1338 144 3 48 chr5 107873840 107874145 -95211387 + MER4A LTR ERV1 261 610 -54 266 286 39 13 chr5 107875441 107875518 -95210014 + MIR SINE MIR 5 83 -179 1040 179 105 91 chr5 107875789 107876141 -95209391 - MSTD LTR MaLR 0 396 40 399 68 0 0 chr5 107876144 107876203 -95209329 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 40755 34 21 1 chr5 107876205 107882223 -95203309 - L1PA2 LINE L1 -13 6142 2 248 172 17 0 chr5 107882338 107882396 -95203136 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 363 299 162 44 chr5 107883693 107883897 -95201635 + MIR SINE MIR 16 243 -19 205 313 100 0 chr5 107883960 107884040 -95201492 + MER5A DNA MER1_type 97 184 -5 2418 102 0 0 chr5 107884377 107884682 -95200850 - AluSq SINE Alu 0 313 9 218 358 23 52 chr5 107885042 107885215 -95200317 - MIR3 SINE MIR -39 169 2 306 0 0 0 chr5 107885357 107885391 -95200141 + (CA)n Simple_repeat Simple_repeat 2 35 0 2136 101 0 3 chr5 107885718 107886006 -95199526 + AluY SINE Alu 3 289 -22 180 163 0 0 chr5 107886815 107886858 -95198674 + (CAT)n Simple_repeat Simple_repeat 1 43 0 431 286 80 68 chr5 107888418 107888729 -95196803 - L1ME4a LINE L1 -158 5963 5649 14771 19 5 0 chr5 107888736 107890886 -95194646 - L1P1 LINE L1 -427 5728 3567 4488 8 0 0 chr5 107890883 107891409 -95194123 + L1HS LINE L1 5630 6155 0 * 238 225 25 25 chr5 107891543 107891663 -95193869 + T-rich Low_complexity Low_complexity 3 122 0 1146 301 113 29 chr5 107892269 107893097 -95192435 + L2 LINE L2 2414 3311 -2 1990 114 54 0 chr5 107893185 107893465 -95192067 + AluSq SINE Alu 1 295 -18 1421 233 121 13 chr5 107893674 107894130 -95191402 - MLT1D LTR MaLR 0 505 1 2096 204 43 4 chr5 107895077 107895583 -95189949 - L1MB2 LINE L1 -45 6126 5601 1266 192 16 70 chr5 107895590 107895960 -95189572 - L1MA4 LINE L1 -4 6296 5947 657 184 125 0 chr5 107895973 107896141 -95189391 - L1MB2 LINE L1 -568 5615 5427 320 304 174 25 chr5 107896180 107896341 -95189191 - MIR SINE MIR -60 202 18 230 286 71 0 chr5 107896543 107896613 -95188919 - L2 LINE L2 -1 3312 3238 362 325 59 16 chr5 107897252 107897527 -95188005 - MER90 LTR ERV1 -12 563 302 225 366 81 24 chr5 107897728 107898023 -95187509 + L2 LINE L2 2554 2865 -449 42 36 0 0 chr5 107898089 107898145 -95187387 + AT_rich Low_complexity Low_complexity 1 56 0 1559 174 0 42 chr5 107898247 107898561 -95186971 - AluJb SINE Alu 0 314 13 290 325 25 74 chr5 107898760 107898923 -95186609 + L2 LINE L2 3141 3295 -18 200 167 0 0 chr5 107900559 107900589 -95184943 + MER5B DNA MER1_type 4 33 -145 2629 107 8 6 chr5 107900663 107901026 -95184506 - THE1B LTR MaLR 0 364 1 1604 255 50 32 chr5 107901055 107901611 -95183921 - L1ME3A LINE L1 -60 6110 5545 243 235 10 122 chr5 107901622 107901720 -95183812 + MER5B DNA MER1_type 19 105 -73 4164 114 105 127 chr5 107901726 107903165 -95182367 - pTR5 LTR ERV1 0 2438 743 369 346 62 0 chr5 107903243 107903373 -95182159 - MIR3 SINE MIR -66 142 5 969 217 6 0 chr5 107903510 107903685 -95181847 - MER45A DNA AcHobo 0 178 3 614 221 179 36 chr5 107955299 107955494 -95130038 + MER58A DNA MER1_type 2 224 0 24 53 0 0 chr5 107956179 107956217 -95129315 + AT_rich Low_complexity Low_complexity 1 38 0 3782 30 13 2 chr5 107956528 107956989 -95128543 + L1PA4 LINE L1 5687 6152 -3 181 306 0 59 chr5 107957565 107957650 -95127882 + L3 LINE CR1 642 721 -856 286 311 98 0 chr5 107957661 107957783 -95127749 - MIR SINE MIR -76 186 53 270 301 16 24 chr5 107959060 107959183 -95126349 - MLT1L LTR MaLR -1 614 493 2325 106 3 3 chr5 107960302 107960614 -95124918 + AluSx SINE Alu 1 312 0 1788 148 50 4 chr5 107961182 107961298 -95124234 + AluJo SINE Alu 1 110 -202 372 22 0 0 chr5 107961298 107961343 -95124189 + (CA)n Simple_repeat Simple_repeat 2 46 0 1788 148 50 4 chr5 107961343 107961504 -95124028 + AluJo SINE Alu 110 291 -21 32 67 0 0 chr5 107961509 107961569 -95123963 + AT_rich Low_complexity Low_complexity 1 60 0 1318 143 18 0 chr5 107962161 107962385 -95123147 - L1MB3 LINE L1 -1 6182 5955 2165 59 0 0 chr5 107962537 107962841 -95122691 - AluY SINE Alu 0 332 29 25 31 0 0 chr5 107964134 107964166 -95121366 + AT_rich Low_complexity Low_complexity 1 32 0 1427 183 62 33 chr5 107965079 107965249 -95120283 - AluJo SINE Alu 0 306 123 459 0 0 0 chr5 107965249 107965300 -95120232 + (TG)n Simple_repeat Simple_repeat 2 52 0 1427 183 62 33 chr5 107965300 107965424 -95120108 - AluJo SINE Alu -183 123 4 1563 271 67 57 chr5 107966303 107966693 -95118839 - L2 LINE L2 -374 2940 2540 1903 179 28 8 chr5 107966693 107967051 -95118481 - MLT1A1 LTR MaLR 0 365 1 1563 271 67 57 chr5 107967051 107967287 -95118245 - L2 LINE L2 -774 2540 2308 931 240 159 29 chr5 107967432 107967840 -95117692 - L1MA8 LINE L1 -17 6274 5814 933 251 0 0 chr5 107967844 107968055 -95117477 - L1 LINE L1 -3381 2765 2555 5404 121 3 32 chr5 107968063 107968128 -95117404 + L1PA12 LINE L1 4760 4825 -1343 2205 67 46 0 chr5 107968128 107968412 -95117120 + AluY SINE Alu 1 297 -14 5404 121 3 32 chr5 107968412 107969766 -95115766 + L1PA12 LINE L1 4825 6160 -8 357 182 4 4 chr5 107969848 107969919 -95115613 - L1 LINE L1 -3585 2561 2491 * 885 217 68 3 chr5 107969912 107970280 -95115252 - L1 LINE L1 -3364 2782 2230 394 359 26 43 chr5 107971304 107971436 -95114096 + MIR SINE MIR 31 159 -103 984 99 0 0 chr5 107971436 107971577 -95113955 + L1MA1 LINE L1 6162 6302 0 394 359 26 43 chr5 107971577 107971678 -95113854 + MIR SINE MIR 159 260 -2 388 340 29 46 chr5 107972254 107972298 -95113234 + L2 LINE L2 2032 2075 -1239 2217 105 0 7 chr5 107972298 107972613 -95112919 - AluSc SINE Alu 0 313 1 388 340 29 46 chr5 107972613 107972808 -95112724 + L2 LINE L2 2075 2268 -1046 325 249 2 25 chr5 107972969 107973089 -95112443 - L1MC5 LINE L1 -10 8032 7832 31 44 0 0 chr5 107973262 107973307 -95112225 + AT_rich Low_complexity Low_complexity 1 45 0 4397 168 69 0 chr5 107973597 107974441 -95111091 + L1MC1 LINE L1 5425 6326 -7 218 393 28 9 chr5 107974557 107974664 -95110868 + L2 LINE L2 3148 3256 -16 189 291 146 57 chr5 107974794 107974952 -95110580 - MIR SINE MIR -39 223 52 652 319 133 56 chr5 107976628 107977761 -95107771 + L2 LINE L2 1582 2802 -512 2309 213 21 0 chr5 107977778 107978313 -95107219 - L1PA16 LINE L1 -853 5293 4748 4218 153 16 1 chr5 107978313 107979023 -95106509 + L1PA16 LINE L1 5308 6027 -139 7823 16 0 0 chr5 107979024 107980506 -95105026 + L1PA3 LINE L1 4674 6155 0 673 194 24 0 chr5 107980539 107980663 -95104869 + L1PA16 LINE L1 6024 6150 -16 257 360 133 32 chr5 107980696 107980974 -95104558 + L2 LINE L2 2805 3110 -162 236 289 26 86 chr5 107981928 107982080 -95103452 + L2 LINE L2 3116 3258 -55 2231 176 49 5 chr5 107984037 107984447 -95101085 + MSTA LTR MaLR 1 428 0 483 286 81 22 chr5 107984525 107984710 -95100822 + MIR SINE MIR 8 203 -59 422 340 25 6 chr5 107984718 107984877 -95100655 - MIR SINE MIR -81 181 20 635 209 151 0 chr5 107986260 107986399 -95099133 + AluJb SINE Alu 134 293 -19 1866 136 0 0 chr5 107986679 107986943 -95098589 + AluSx SINE Alu 36 299 -13 1531 189 47 0 chr5 107987120 107987270 -95098262 - AluJo SINE Alu -24 288 147 189 0 0 0 chr5 107987270 107987291 -95098241 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1531 189 47 0 chr5 107987291 107987415 -95098117 - AluJo SINE Alu -165 147 1 646 257 22 56 chr5 107987881 107988135 -95097397 + L1ME1 LINE L1 5921 6161 -5 11364 17 0 0 chr5 107988417 107990499 -95095033 - L1PA2 LINE L1 0 6155 4074 197 301 114 57 chr5 107990513 107990689 -95094843 + L2 LINE L2 2669 2854 -460 199 383 47 9 chr5 107991248 107991355 -95094177 - MIR SINE MIR -59 149 39 354 279 82 8 chr5 107991391 107991513 -95094019 + L2 LINE L2 3182 3312 -1 2132 108 0 7 chr5 107991622 107991917 -95093615 + AluSg SINE Alu 1 293 -17 207 0 0 0 chr5 107992055 107992078 -95093454 + (TA)n Simple_repeat Simple_repeat 1 23 0 270 0 0 0 chr5 107992078 107992108 -95093424 + (TG)n Simple_repeat Simple_repeat 2 31 0 380 302 63 0 chr5 107994619 107994745 -95090787 + MIR SINE MIR 73 206 -56 21 0 0 0 chr5 107995000 107995021 -95090511 + AT_rich Low_complexity Low_complexity 1 21 0 2217 75 3 7 chr5 107995413 107995732 -95089800 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 107995981 107996004 -95089528 + AT_rich Low_complexity Low_complexity 1 23 0 12713 203 18 81 chr5 107998152 108004059 -95081473 + L1PA15 LINE L1 1323 6816 0 338 335 199 6 chr5 108004116 108004277 -95081255 + MER91A DNA MER1_type 5 196 0 3921 22 22 2 chr5 108004578 108005231 -95080301 - L1PA4 LINE L1 -417 5738 5075 3415 37 2 0 chr5 108005231 108005667 -95079865 + L1PA4 LINE L1 5737 6174 0 27 73 0 0 chr5 108005823 108005878 -95079654 + AT_rich Low_complexity Low_complexity 1 55 0 2137 104 7 0 chr5 108006430 108006718 -95078814 - AluSg SINE Alu -18 292 3 546 29 0 0 chr5 108007309 108007377 -95078155 + (TC)n Simple_repeat Simple_repeat 1 68 0 342 0 0 0 chr5 108007376 108007414 -95078118 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 579 255 54 16 chr5 108008137 108008321 -95077211 - L1MC4 LINE L1 -479 7563 7373 981 351 30 5 chr5 108008322 108008724 -95076808 - LTR16A LTR ERVL -18 432 21 1764 239 49 38 chr5 108008744 108009351 -95076181 - L1MC4 LINE L1 -646 7396 6783 266 307 158 0 chr5 108009435 108009549 -95075983 + MIR SINE MIR 118 249 -13 194 229 0 0 chr5 108009573 108009608 -95075924 + MIR SINE MIR 217 251 -11 24 53 0 0 chr5 108009968 108010006 -95075526 + AT_rich Low_complexity Low_complexity 1 38 0 199 376 0 43 chr5 108010946 108011063 -95074469 + MIR SINE MIR 40 151 -57 234 345 71 9 chr5 108011390 108011503 -95074029 - L2 LINE L2 -31 3282 3163 288 262 103 28 chr5 108011526 108011671 -95073861 - MLT1J LTR MaLR -1 510 355 264 122 0 0 chr5 108011972 108012013 -95073519 + (TA)n Simple_repeat Simple_repeat 2 42 0 391 346 74 59 chr5 108012135 108012540 -95072992 + L2 LINE L2 2370 2780 -534 231 339 153 0 chr5 108012654 108012772 -95072760 + MIR3 SINE MIR 62 197 -11 21 36 0 0 chr5 108014233 108014261 -95071271 + AT_rich Low_complexity Low_complexity 1 28 0 243 326 43 76 chr5 108014563 108014864 -95070668 + MLT1K LTR MaLR 161 451 -137 858 232 12 0 chr5 108015917 108016081 -95069451 + MLT1D LTR MaLR 5 170 -335 7374 191 11 17 chr5 108016083 108016450 -95069082 - L1PA16 LINE L1 -4 6162 5794 519 17 0 0 chr5 108016450 108016510 -95069022 + (CA)n Simple_repeat Simple_repeat 1 60 0 7374 191 11 17 chr5 108016510 108018636 -95066896 - L1PA16 LINE L1 -372 5794 3684 256 149 117 11 chr5 108018631 108018725 -95066807 + L1M2 LINE L1 3205 3308 -2838 * 887 159 59 12 chr5 108018719 108018889 -95066643 + L1M2 LINE L1 5601 5778 -513 1764 186 52 6 chr5 108019187 108019536 -95065996 - MLT1A1 LTR MaLR 0 365 1 748 161 75 87 chr5 108020047 108020301 -95065231 - Charlie5 DNA MER1_type -29 2583 2333 9661 259 54 25 chr5 108021053 108021864 -95063668 + L1MA7 LINE L1 2 788 -5944 1980 131 29 0 chr5 108021864 108022167 -95063365 - AluSg SINE Alu 0 311 1 9661 259 54 25 chr5 108022167 108024505 -95061027 + L1MA7 LINE L1 788 2574 -4158 9731 104 25 2 chr5 108024527 108026355 -95059177 - L1PA8 LINE L1 -450 5722 3853 3087 83 9 0 chr5 108026355 108026787 -95058745 + L1PA8 LINE L1 5734 6169 -3 31 68 0 0 chr5 108026787 108026846 -95058686 + AT_rich Low_complexity Low_complexity 1 59 0 526 224 76 5 chr5 108026846 108027038 -95058494 + L1MA7 LINE L1 2586 2802 -3930 2053 104 4 0 chr5 108027038 108027317 -95058215 + AluSp SINE Alu 1 280 -33 288 0 0 0 chr5 108027317 108027349 -95058183 + (CA)n Simple_repeat Simple_repeat 1 32 0 13702 150 19 28 chr5 108027372 108029805 -95055727 + Tigger1 DNA MER2_type 7 2417 -1 13764 188 29 24 chr5 108029819 108033801 -95051731 + L1MA7 LINE L1 2820 6877 0 22 56 0 0 chr5 108033850 108033886 -95051646 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 108034705 108034726 -95050806 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr5 108035848 108035879 -95049653 + (CA)n Simple_repeat Simple_repeat 2 32 0 327 65 0 0 chr5 108035879 108035925 -95049607 + (GA)n Simple_repeat Simple_repeat 1 46 0 481 284 51 55 chr5 108036466 108036720 -95048812 + MIR SINE MIR 8 260 -2 490 286 118 20 chr5 108036896 108037098 -95048434 + MIR SINE MIR 39 262 0 451 234 0 0 chr5 108037192 108037286 -95048246 + FRAM SINE Alu 1 93 -83 294 311 13 53 chr5 108037469 108037620 -95047912 - L1ME LINE L1 -440 5681 5537 274 315 21 39 chr5 108037996 108038184 -95047348 + MIR SINE MIR 17 194 -66 22 0 0 0 chr5 108039299 108039321 -95046211 + AT_rich Low_complexity Low_complexity 1 22 0 754 271 28 9 chr5 108039503 108039717 -95045815 - MER20 DNA MER1_type 0 219 2 188 327 39 64 chr5 108039834 108039990 -95045542 - MER5A DNA MER1_type -1 188 37 695 241 82 0 chr5 108040235 108040405 -95045127 + MER5A DNA MER1_type 3 186 -3 843 306 114 37 chr5 108041042 108041244 -95044288 - L2 LINE L2 -591 2723 2538 1855 170 3 19 chr5 108041244 108041556 -95043976 - AluJo SINE Alu -5 307 1 843 306 114 37 chr5 108041556 108041916 -95043616 - L2 LINE L2 -776 2538 2118 1221 202 20 105 chr5 108043693 108044160 -95041372 + MLT2B1 LTR ERVL 3 520 0 5948 95 2 12 chr5 108045186 108046433 -95039099 - L1PA13 LINE L1 0 6163 4899 7725 178 6 35 chr5 108046434 108048040 -95037492 + L1P LINE L1 3273 4831 -1315 243 374 58 0 chr5 108048475 108048614 -95036918 + MIR SINE MIR 100 246 -16 236 326 51 31 chr5 108048638 108048736 -95036796 - L2 LINE L2 -1 3312 3213 958 141 0 0 chr5 108050629 108050771 -95034761 - MER57A LTR ERV1 -174 229 88 37841 50 3 0 chr5 108050787 108056359 -95029173 - L1PA4 LINE L1 -3 6152 567 189 350 0 0 chr5 108056953 108057033 -95028499 + MIR SINE MIR 183 262 0 231 340 95 15 chr5 108057145 108057407 -95028125 + L1M2 LINE L1 2 284 -6565 5471 123 14 22 chr5 108057838 108059025 -95026507 + L1PA15 LINE L1 4320 5470 -695 189 0 0 0 chr5 108059025 108059046 -95026486 + (CAA)n Simple_repeat Simple_repeat 2 22 0 5471 123 14 22 chr5 108059046 108059730 -95025802 + L1PA15 LINE L1 5470 6158 -7 244 266 31 62 chr5 108059744 108059872 -95025660 - L1ME LINE L1 -303 5818 5695 865 282 34 0 chr5 108060345 108060551 -95024981 - MER20 DNA MER1_type -6 213 1 214 50 50 0 chr5 108061048 108061088 -95024444 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 649 325 48 30 chr5 108061128 108061396 -95024136 - LTR33 LTR ERVL -169 352 80 1259 242 44 0 chr5 108061436 108061775 -95023757 - L1ME LINE L1 -743 5403 5050 187 258 70 102 chr5 108062790 108062918 -95022614 + L3 LINE CR1 89 212 -1365 398 193 132 18 chr5 108064065 108064179 -95021353 - L2 LINE L2 -1 3312 3186 337 219 76 21 chr5 108065352 108065465 -95020067 + MIR SINE MIR 25 146 -68 526 274 127 11 chr5 108065482 108065708 -95019824 - MIR SINE MIR -11 251 3 186 103 0 0 chr5 108065901 108065930 -95019602 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 649 266 20 82 chr5 108065930 108066019 -95019513 - L2 LINE L2 -7 3306 3213 3355 124 11 18 chr5 108066019 108066583 -95018949 + L1MA3 LINE L1 5746 6305 0 649 266 20 82 chr5 108066583 108066797 -95018735 - L2 LINE L2 -100 3213 3022 233 339 6 29 chr5 108067445 108067616 -95017916 + T-rich Low_complexity Low_complexity 4 170 0 461 339 90 45 chr5 108067616 108068038 -95017494 - L2 LINE L2 -15 3298 2858 2216 156 3 0 chr5 108068958 108069317 -95016215 + MER46B DNA MER2_type 1 235 -1 2096 166 3 0 chr5 108069704 108070048 -95015484 + MER7A DNA MER2_type 4 346 0 6517 204 25 9 chr5 108070081 108071351 -95014181 + L1MA2 LINE L1 11 1301 -6264 * 28093 101 44 4 chr5 108071350 108076335 -95009197 - L1PA6 LINE L1 -225 6244 1042 9537 186 31 31 chr5 108076326 108079716 -95005816 + L1MA2 LINE L1 2345 5832 -1891 * 1288 88 0 0 chr5 108079716 108079887 -95005645 - AluY SINE Alu 0 311 141 9537 186 31 31 chr5 108079887 108081780 -95003752 + L1MA2 LINE L1 5832 7723 0 191 343 40 45 chr5 108081802 108082003 -95003529 - L2 LINE L2 -911 2403 2204 572 226 7 0 chr5 108082210 108082365 -95003167 + CT-rich Low_complexity Low_complexity 2 157 0 2053 136 33 31 chr5 108084368 108084728 -95000804 - THE1B LTR MaLR -1 363 3 22 35 0 0 chr5 108084919 108084948 -95000584 + AT_rich Low_complexity Low_complexity 1 29 0 2447 73 0 0 chr5 108085954 108086256 -94999276 - AluY SINE Alu -9 302 1 32828 53 7 0 chr5 108088654 108094757 -94990775 - L1PA4 LINE L1 -1 6154 1 351 0 0 0 chr5 108094914 108094953 -94990579 + (CA)n Simple_repeat Simple_repeat 1 39 0 25 20 0 59 chr5 108095894 108095945 -94989587 + AT_rich Low_complexity Low_complexity 1 48 0 275 324 14 34 chr5 108096086 108096234 -94989298 - MER5A DNA MER1_type -44 145 1 5159 169 35 38 chr5 108096318 108097401 -94988131 - L1MC3 LINE L1 0 7785 6706 1354 196 50 45 chr5 108097487 108097617 -94987915 - Charlie1 DNA MER1_type -7 2754 2626 2097 107 36 0 chr5 108097617 108097898 -94987634 - AluSx SINE Alu -21 291 1 1354 196 50 45 chr5 108097898 108098211 -94987321 - Charlie1 DNA MER1_type -135 2626 2309 742 262 12 0 chr5 108098208 108098376 -94987156 - Charlie1 DNA MER1_type -2591 170 1 * 505 303 46 29 chr5 108099833 108100008 -94985524 + MER5B DNA MER1_type 1 178 0 2328 96 0 3 chr5 108100079 108100391 -94985141 + AluY SINE Alu 1 311 0 273 29 0 0 chr5 108100676 108100710 -94984822 + (CA)n Simple_repeat Simple_repeat 2 35 0 232 269 148 0 chr5 108100951 108101059 -94984473 + MIR SINE MIR 61 184 -78 203 348 0 14 chr5 108101343 108101412 -94984120 - MIR SINE MIR -160 102 35 361 276 65 0 chr5 108101461 108101584 -94983948 - MIR SINE MIR -56 206 76 245 271 53 0 chr5 108102613 108102702 -94982830 + Charlie8 DNA MER1_type 242 2417 0 2067 287 53 33 chr5 108103025 108103843 -94981689 - L2 LINE L2 -234 3079 2237 238 268 94 14 chr5 108103852 108103990 -94981542 - L1MEd LINE L1 -5041 1890 1742 2387 59 7 0 chr5 108104590 108104880 -94980652 - AluY SINE Alu -11 300 9 540 269 87 19 chr5 108105288 108105496 -94980036 + L1M4b LINE L1 11 232 -6627 417 256 70 39 chr5 108106010 108106139 -94979393 - MLT1H LTR MaLR -195 354 222 235 276 57 9 chr5 108107470 108107575 -94977957 - MLT-int LTR MaLR -1624 111 2 407 268 70 28 chr5 108108384 108108526 -94977006 + MIR SINE MIR 103 250 -12 180 77 0 0 chr5 108112052 108112078 -94973454 + (TC)n Simple_repeat Simple_repeat 1 26 0 331 328 90 15 chr5 108112229 108112363 -94973169 + L1ME3A LINE L1 6004 6147 -23 1583 176 7 14 chr5 108113975 108114264 -94971268 + AluJo SINE Alu 3 289 -23 189 0 0 0 chr5 108114265 108114286 -94971246 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 32 43 0 0 chr5 108114333 108114379 -94971153 + AT_rich Low_complexity Low_complexity 1 46 0 404 295 133 28 chr5 108115434 108115719 -94969813 - L1MC/D LINE L1 -2088 5720 5406 2067 119 7 0 chr5 108115830 108116132 -94969400 + AluSg SINE Alu 1 304 -6 339 313 38 0 chr5 108116367 108116527 -94969005 - L1MEd LINE L1 -5001 1422 1257 2176 118 3 0 chr5 108116594 108116898 -94968634 - AluSx SINE Alu -7 305 1 31 0 0 0 chr5 108117664 108117695 -94967837 + AT_rich Low_complexity Low_complexity 1 31 0 335 300 99 24 chr5 108117903 108118400 -94967132 - L1MC/D LINE L1 -1111 5035 4502 2451 65 0 3 chr5 108118578 108118885 -94966647 - AluY SINE Alu -5 306 1 534 266 41 33 chr5 108119049 108119320 -94966212 - L1MC/D LINE L1 -2043 4103 3831 244 285 69 0 chr5 108119355 108119499 -94966033 - L1MC/D LINE L1 -2398 3748 3595 506 112 34 22 chr5 108119597 108119775 -94965757 + (TA)n Simple_repeat Simple_repeat 1 180 0 491 112 58 0 chr5 108119788 108120049 -94965483 + (TA)n Simple_repeat Simple_repeat 1 276 0 526 218 184 17 chr5 108120164 108120398 -94965134 + Charlie4a DNA MER1_type 112 384 -124 341 290 59 29 chr5 108120575 108120775 -94964757 - L1MC/D LINE L1 -2643 3503 3296 441 196 46 0 chr5 108120822 108121024 -94964508 - L1MA9 LINE L1 -32 6280 5936 233 192 152 20 chr5 108121029 108121180 -94964352 - L1MC/D LINE L1 -2856 3290 3120 204 204 37 0 chr5 108173834 108173888 -94911644 + A-rich Low_complexity Low_complexity 4 59 0 249 350 0 0 chr5 108175870 108176007 -94909525 + A-rich Low_complexity Low_complexity 1 137 0 27 0 0 0 chr5 108176551 108176578 -94908954 + AT_rich Low_complexity Low_complexity 1 27 0 273 278 9 17 chr5 108178256 108178371 -94907161 + GA-rich Low_complexity Low_complexity 2 115 0 227 320 0 0 chr5 108182881 108182956 -94902576 + (CATA)n Simple_repeat Simple_repeat 4 78 0 21 0 0 0 chr5 108185240 108185261 -94900271 + AT_rich Low_complexity Low_complexity 1 21 0 199 244 126 30 chr5 108186591 108186726 -94898806 + L2 LINE L2 2185 2332 -982 1975 102 75 36 chr5 108187481 108187842 -94897690 - THE1C LTR MaLR 0 375 1 182 365 122 0 chr5 108189394 108189509 -94896023 - L2 LINE L2 -22 3250 3122 523 310 55 5 chr5 108190921 108191146 -94894386 + MIR SINE MIR 28 262 0 230 382 20 0 chr5 108191391 108191493 -94894039 + MIR3 SINE MIR 99 202 -6 235 342 68 25 chr5 108191675 108191836 -94893696 + L2 LINE L2 3104 3271 -1 732 235 80 32 chr5 108191896 108192147 -94893385 - L1ME LINE L1 -473 5691 5429 1215 228 95 15 chr5 108192278 108192678 -94892854 - L1ME LINE L1 -865 5281 4850 24 77 0 0 chr5 108193800 108193852 -94891680 + AT_rich Low_complexity Low_complexity 1 52 0 28 86 0 0 chr5 108194316 108194386 -94891146 + AT_rich Low_complexity Low_complexity 1 70 0 35 24 0 0 chr5 108194958 108195000 -94890532 + AT_rich Low_complexity Low_complexity 1 42 0 2493 246 103 56 chr5 108195394 108195769 -94889763 - L1ME LINE L1 -607 5559 5203 1977 142 3 19 chr5 108195769 108196085 -94889447 - AluSp SINE Alu -2 311 1 2493 246 103 56 chr5 108196085 108196526 -94889006 - L1ME LINE L1 -963 5203 4784 1744 179 68 3 chr5 108196526 108196866 -94888666 + MLT1A1 LTR MaLR 1 362 -3 2493 246 103 56 chr5 108196866 108197557 -94887975 - L1ME LINE L1 -1382 4784 3986 23 33 0 0 chr5 108197728 108197758 -94887774 + AT_rich Low_complexity Low_complexity 1 30 0 696 192 24 0 chr5 108198311 108198436 -94887096 - FLAM_C SINE Alu -5 128 1 23 33 0 0 chr5 108198605 108198635 -94886897 + AT_rich Low_complexity Low_complexity 1 30 0 223 244 26 17 chr5 108200312 108200427 -94885105 + (TA)n Simple_repeat Simple_repeat 1 116 0 650 251 53 79 chr5 108200892 108201195 -94884337 + MLT1I LTR MaLR 115 409 0 266 68 45 0 chr5 108203206 108203250 -94882282 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 291 28 0 0 chr5 108203400 108203436 -94882096 + (TG)n Simple_repeat Simple_repeat 2 37 0 2141 117 0 23 chr5 108203499 108203808 -94881724 - AluSx SINE Alu -10 302 1 209 376 86 26 chr5 108203900 108204017 -94881515 + L2 LINE L2 3182 3305 -8 1505 246 114 9 chr5 108204651 108205106 -94880426 + MLT1D LTR MaLR 1 503 -2 252 289 72 12 chr5 108205512 108205595 -94879937 - L3 LINE CR1 -120 1457 1370 2236 77 0 10 chr5 108205621 108205921 -94879611 + AluY SINE Alu 1 297 -14 192 273 0 0 chr5 108207552 108207596 -94877936 + MIR SINE MIR 94 137 -125 255 297 108 9 chr5 108208503 108208614 -94876918 - MIR SINE MIR -30 232 111 198 0 0 0 chr5 108209016 108209038 -94876494 + (CA)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr5 108209220 108209244 -94876288 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr5 108209498 108209518 -94876014 + (TC)n Simple_repeat Simple_repeat 1 20 0 1656 229 78 34 chr5 108209923 108210395 -94875137 - MLT1D LTR MaLR -1 504 12 311 241 83 0 chr5 108210465 108210599 -94874933 - L1ME LINE L1 -303 5818 5666 976 224 158 25 chr5 108210668 108211061 -94874471 - Charlie2 DNA MER1_type -562 2300 1856 560 291 80 29 chr5 108211096 108211371 -94874161 - Charlie2 DNA MER1_type -2487 295 7 510 234 71 88 chr5 108213541 108213780 -94871752 - MIR SINE MIR 0 262 28 257 211 0 0 chr5 108214167 108214224 -94871308 + MLT1G1 LTR MaLR 6 62 -533 1613 216 70 16 chr5 108215351 108215791 -94869741 + MLT1C LTR MaLR 4 467 0 1054 252 21 0 chr5 108215846 108216084 -94869448 + MIR SINE MIR 8 250 -12 2034 133 0 10 chr5 108217103 108217396 -94868136 - AluSx SINE Alu -22 290 1 191 298 0 18 chr5 108217512 108217569 -94867963 - MIR SINE MIR -13 249 194 3700 133 14 20 chr5 108217626 108218265 -94867267 - MER41B LTR ERV1 0 635 1 21 0 0 0 chr5 108218272 108218293 -94867239 + AT_rich Low_complexity Low_complexity 1 21 0 519 234 28 80 chr5 108219137 108219526 -94866006 - L1MC5 LINE L1 -44 7917 7549 1345 129 40 13 chr5 108219645 108219869 -94865663 + MER30 DNA MER1_type 1 230 0 443 265 48 32 chr5 108220299 108220488 -94865044 - HAL1 LINE L1 -26 2481 2290 216 273 71 50 chr5 108221083 108221182 -94864350 - MIR3 SINE MIR -3 205 105 237 331 123 13 chr5 108221914 108222068 -94863464 + MIR3 SINE MIR 34 204 -4 1138 153 28 0 chr5 108222366 108222543 -94862989 + AluJo SINE Alu 87 268 -44 251 137 0 20 chr5 108222645 108222696 -94862836 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 398 264 72 77 chr5 108223560 108223768 -94861764 - MIR SINE MIR -48 214 8 24 32 0 0 chr5 108224442 108224473 -94861059 + AT_rich Low_complexity Low_complexity 1 31 0 490 310 82 78 chr5 108224532 108225083 -94860449 - L1MC4a LINE L1 -30 6091 5539 335 265 52 147 chr5 108225094 108225227 -94860305 - MIR SINE MIR -3 259 115 2464 68 3 0 chr5 108225227 108225537 -94859995 - AluY SINE Alu 0 311 1 1985 129 3 25 chr5 108225547 108225864 -94859668 - AluSx SINE Alu -2 310 1 335 265 52 147 chr5 108225864 108225991 -94859541 - MIR SINE MIR -156 106 14 225 245 0 0 chr5 108228644 108228697 -94856835 - L1MD3 LINE L1 -1324 6671 6619 289 316 73 0 chr5 108228895 108229031 -94856501 + MIR3 SINE MIR 39 184 -24 523 174 11 0 chr5 108229491 108229583 -94855949 + MLT1A1 LTR MaLR 1 93 -281 873 188 13 0 chr5 108229583 108229737 -94855795 + MLT1A1 LTR MaLR 210 365 0 514 281 174 34 chr5 108229896 108230131 -94855401 - MLT1H1 LTR MaLR -287 268 1 1804 164 12 88 chr5 108230478 108230900 -94854632 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 108232345 108232366 -94853166 + AT_rich Low_complexity Low_complexity 1 21 0 321 245 132 28 chr5 108232594 108232700 -94852832 - L2 LINE L2 -2 3270 3154 368 233 68 68 chr5 108232705 108232808 -94852724 - L2 LINE L2 -2 3270 3168 2860 148 82 21 chr5 108233558 108234117 -94851415 + LTR59 LTR ERV1 1 593 -4 1716 93 26 19 chr5 108234441 108234710 -94850822 - L1PB2 LINE L1 -2 6149 5879 685 130 0 0 chr5 108234710 108234810 -94850722 - L1PB2 LINE L1 -499 5652 5553 2863 134 19 0 chr5 108234842 108235216 -94850316 + MER57B LTR ERV1 1 385 -49 7453 38 0 0 chr5 108235216 108236581 -94848951 - L1PA4 LINE L1 0 6155 4791 2863 134 19 0 chr5 108236581 108236632 -94848900 + MER57B LTR ERV1 385 434 0 206 208 19 19 chr5 108237236 108237248 -94848284 + L2 LINE L2 3261 3272 -41 194 81 27 0 chr5 108237248 108237285 -94848247 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 206 208 19 19 chr5 108237285 108237325 -94848207 + L2 LINE L2 3271 3313 0 371 232 26 0 chr5 108237575 108237730 -94847802 + (TA)n Simple_repeat Simple_repeat 2 160 0 28 29 0 0 chr5 108237748 108237783 -94847749 + AT_rich Low_complexity Low_complexity 1 35 0 1853 271 29 27 chr5 108238073 108238620 -94846912 + MER77 LTR ERV1 54 601 -4 273 273 52 0 chr5 108238841 108238918 -94846614 + MIR SINE MIR 4 84 -178 346 365 102 31 chr5 108239256 108239648 -94845884 - L2 LINE L2 0 3313 2894 1939 117 6 41 chr5 108241631 108241948 -94843584 + AluSx SINE Alu 1 306 -6 263 48 0 24 chr5 108243159 108243201 -94842331 + (TA)n Simple_repeat Simple_repeat 1 41 0 317 211 0 51 chr5 108243397 108243572 -94841960 + (TA)n Simple_repeat Simple_repeat 1 166 0 250 180 76 29 chr5 108243579 108243751 -94841781 + (CTATA)n Simple_repeat Simple_repeat 1 180 0 * 320 93 0 122 chr5 108243677 108243882 -94841650 + (TA)n Simple_repeat Simple_repeat 1 180 0 507 168 176 34 chr5 108245293 108245412 -94840120 - MSTA LTR MaLR -45 383 248 8608 158 19 39 chr5 108245437 108247046 -94838486 + MSTA-int LTR MaLR 3 1580 0 2002 156 119 8 chr5 108247046 108247431 -94838101 + MSTA LTR MaLR 1 428 0 5013 224 85 31 chr5 108247431 108248686 -94836846 - L1M4 LINE L1 -524 5660 4473 1785 184 3 3 chr5 108248686 108248996 -94836536 - AluJo SINE Alu -2 310 1 5013 224 85 31 chr5 108248996 108249143 -94836389 - L1M4 LINE L1 -1711 4473 4335 2184 72 55 0 chr5 108249143 108249433 -94836099 - AluY SINE Alu -5 306 1 5013 224 85 31 chr5 108249433 108250031 -94835501 - L1M4 LINE L1 -1849 4335 3559 2450 83 3 6 chr5 108250039 108250352 -94835180 + AluSp SINE Alu 1 312 -1 23 0 0 0 chr5 108250506 108250529 -94835003 + AT_rich Low_complexity Low_complexity 1 23 0 180 182 0 0 chr5 108250802 108250846 -94834686 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 23 33 0 0 chr5 108251604 108251634 -94833898 + AT_rich Low_complexity Low_complexity 1 30 0 258 296 0 0 chr5 108252120 108252201 -94833331 - L1ME LINE L1 -529 5592 5512 731 313 32 11 chr5 108253205 108253553 -94831979 - L1ME3A LINE L1 -272 5898 5544 599 289 34 6 chr5 108254669 108254873 -94830659 - L1ME2 LINE L1 0 6162 5954 365 306 58 19 chr5 108254881 108255087 -94830445 - HAL1 LINE L1 -2281 226 13 26 30 0 0 chr5 108255110 108255143 -94830389 + AT_rich Low_complexity Low_complexity 1 33 0 2347 38 45 0 chr5 108255325 108255612 -94829920 - AluY SINE Alu -11 300 1 21 0 0 0 chr5 108255846 108255867 -94829665 + AT_rich Low_complexity Low_complexity 1 21 0 2300 41 4 0 chr5 108256610 108256878 -94828654 + AluY SINE Alu 30 298 -13 234 0 0 0 chr5 108256992 108257018 -94828514 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 1087 234 0 5 chr5 108257019 108257233 -94828299 - AluJo SINE Alu -16 296 84 7039 48 15 10 chr5 108257386 108258356 -94827176 - L1PA6 LINE L1 -1 6153 5200 23 33 0 0 chr5 108258636 108258666 -94826866 + AT_rich Low_complexity Low_complexity 1 30 0 198 103 0 0 chr5 108259435 108259464 -94826068 + (A)n Simple_repeat Simple_repeat 1 29 0 4827 133 19 19 chr5 108259522 108260354 -94825178 - L1PA13 LINE L1 0 6163 5332 211 212 0 45 chr5 108261526 108261592 -94823940 + T-rich Low_complexity Low_complexity 2 64 0 300 356 0 0 chr5 108261734 108261838 -94823694 - L2 LINE L2 -9 3304 3201 612 262 53 5 chr5 108261929 108262116 -94823416 + MIR SINE MIR 65 260 -2 749 297 23 35 chr5 108262374 108262630 -94822902 + LTR16C LTR ERVL 1 253 -238 2002 142 119 13 chr5 108262634 108262833 -94822699 + MSTA LTR MaLR 1 178 -250 285 29 0 0 chr5 108262833 108262867 -94822665 + (TC)n Simple_repeat Simple_repeat 1 34 0 2002 142 119 13 chr5 108262867 108263054 -94822478 + MSTA LTR MaLR 178 428 0 7482 163 8 38 chr5 108263056 108264416 -94821116 + MSTA-int LTR MaLR 3 1322 -258 1040 172 102 19 chr5 108264418 108264633 -94820899 + MSTA LTR MaLR 194 426 -2 464 330 79 9 chr5 108264635 108264850 -94820682 + LTR16C LTR ERVL 253 482 -9 311 373 71 16 chr5 108264965 108265220 -94820312 - HAL1b LINE L1 -994 354 86 14377 99 5 20 chr5 108265930 108268084 -94817448 + HERVH LTR ERV1 865 2985 -4728 970 126 25 0 chr5 108268070 108268229 -94817303 + HERVH LTR ERV1 3128 3290 -4423 * 6447 131 4 22 chr5 108268219 108269979 -94815553 + HERVH LTR ERV1 3492 6012 -1818 1206 115 46 18 chr5 108269976 108270193 -94815339 + HERVH LTR ERV1 5597 5819 -1894 * 2368 78 62 13 chr5 108270193 108270565 -94814967 + HERVH LTR ERV1 7324 7713 0 2618 70 122 5 chr5 108270565 108270966 -94814566 + LTR7 LTR ERV1 1 448 -2 265 288 112 48 chr5 108270968 108271093 -94814439 - L2 LINE L2 -21 3292 3160 1825 93 0 0 chr5 108271095 108271321 -94814211 + AluSc SINE Alu 3 228 -81 713 360 72 12 chr5 108271495 108271898 -94813634 - LTR16A LTR ERVL -23 427 1 211 136 34 0 chr5 108272772 108272831 -94812701 + (TA)n Simple_repeat Simple_repeat 2 62 0 219 287 103 11 chr5 108273282 108273369 -94812163 + L2 LINE L2 2220 2314 -1000 682 231 0 0 chr5 108274085 108274219 -94811313 + HERVH LTR ERV1 5016 5149 -2564 1341 114 43 0 chr5 108274220 108274431 -94811101 + HERVH LTR ERV1 5600 5819 -1894 693 86 0 0 chr5 108275157 108275250 -94810282 + AluSg/x SINE Alu 209 301 -9 737 144 85 5 chr5 108275255 108275534 -94809998 - THE1C LTR MaLR -35 340 1 969 198 178 16 chr5 108275720 108275995 -94809537 - AluJb SINE Alu 0 314 1 1265 199 31 28 chr5 108276019 108276346 -94809186 - L1MA8 LINE L1 -4 6287 5960 27 29 0 0 chr5 108276940 108276974 -94808558 + AT_rich Low_complexity Low_complexity 1 34 0 222 200 0 0 chr5 108277079 108277119 -94808413 + (CA)n Simple_repeat Simple_repeat 2 41 0 595 289 13 0 chr5 108277751 108277907 -94807625 - Charlie8 DNA MER1_type -2141 276 119 1710 184 3 0 chr5 108278087 108278402 -94807130 + AluJo SINE Alu 1 316 0 338 80 0 0 chr5 108278753 108278803 -94806729 + L1PA6 LINE L1 6101 6150 -4 22 0 0 0 chr5 108278976 108278998 -94806534 + AT_rich Low_complexity Low_complexity 1 22 0 335 108 0 135 chr5 108279529 108279603 -94805929 + MADE1 DNA Mariner 17 80 0 23 0 0 0 chr5 108280546 108280569 -94804963 + AT_rich Low_complexity Low_complexity 1 23 0 1730 170 154 19 chr5 108280791 108281168 -94804364 + MSTA LTR MaLR 1 428 0 240 143 0 0 chr5 108282352 108282394 -94803138 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 971 193 0 6 chr5 108282396 108282572 -94802960 - FRAM SINE Alu 0 176 2 191 348 8 42 chr5 108282948 108283066 -94802466 - L3 LINE CR1 -394 1183 1070 1587 179 40 81 chr5 108283502 108283899 -94801633 - MLT2D LTR ERVL 0 414 34 200 289 36 12 chr5 108284433 108284516 -94801016 - MER5A DNA MER1_type 0 189 105 759 117 0 0 chr5 108284762 108284900 -94800632 - AluSp/q SINE Alu 0 309 172 250 270 0 50 chr5 108285137 108285163 -94800369 + U2 snRNA snRNA 11 37 -151 1847 144 34 3 chr5 108285163 108285490 -94800042 + MER44D DNA MER2_type 2 608 -1 250 270 0 50 chr5 108285490 108285563 -94799969 + U2 snRNA snRNA 37 105 -83 375 317 153 15 chr5 108287394 108287596 -94797936 - MIR SINE MIR -13 249 20 880 142 34 7 chr5 108288052 108288200 -94797332 + FAM SINE Alu 23 174 -11 298 106 45 30 chr5 108289205 108289271 -94796261 + L1MB3 LINE L1 6110 6176 -7 28 29 0 0 chr5 108289271 108289306 -94796226 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 108289654 108289686 -94795846 + AT_rich Low_complexity Low_complexity 1 32 0 262 193 12 12 chr5 108290518 108290601 -94794931 + CT-rich Low_complexity Low_complexity 4 86 0 5379 116 7 12 chr5 108290679 108291521 -94794011 + L1PB2 LINE L1 5307 6144 -7 314 151 0 19 chr5 108291668 108291721 -94793811 - 5S rRNA rRNA -69 52 1 31287 50 3 1 chr5 108292259 108298402 -94787130 + L1PA4 LINE L1 1 6151 -4 362 247 45 0 chr5 108299024 108299113 -94786419 + MIR SINE MIR 138 230 -32 26 30 0 0 chr5 108299791 108299824 -94785708 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 108300952 108300973 -94784559 + AT_rich Low_complexity Low_complexity 1 21 0 186 348 0 0 chr5 108301091 108301160 -94784372 + L2 LINE L2 2574 2642 -672 1741 225 22 45 chr5 108301461 108301949 -94783583 + MLT1D LTR MaLR 21 497 -8 270 297 116 22 chr5 108302948 108303086 -94782446 + MER5B DNA MER1_type 28 178 0 261 0 0 0 chr5 108304067 108304096 -94781436 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2388 81 0 0 chr5 108304171 108304466 -94781066 + AluSg SINE Alu 1 295 -15 826 258 18 18 chr5 108304569 108304790 -94780742 + L1MD1 LINE L1 166 386 -6154 325 336 61 57 chr5 108304826 108305055 -94780477 + L1MD1 LINE L1 498 727 -5813 235 278 186 0 chr5 108305337 108305434 -94780098 + L1MD1 LINE L1 575 689 -5851 6762 232 47 24 chr5 108305654 108308871 -94776661 + L1MD1 LINE L1 3349 6636 0 319 267 117 33 chr5 108308994 108309114 -94776418 - MIR SINE MIR -41 221 92 6810 68 5 0 chr5 108309231 108310316 -94775216 + L1PA7 LINE L1 5064 6152 -2 216 258 31 10 chr5 108310977 108311074 -94774458 + (TA)n Simple_repeat Simple_repeat 1 99 0 218 335 6 51 chr5 108311515 108311673 -94773859 + C-rich Low_complexity Low_complexity 6 156 0 447 19 0 0 chr5 108312099 108312151 -94773381 + (CTA)n Simple_repeat Simple_repeat 2 53 0 22 0 0 0 chr5 108312897 108312919 -94772613 + AT_rich Low_complexity Low_complexity 1 22 0 665 307 146 28 chr5 108313277 108314056 -94771476 + L2 LINE L2 2435 3313 0 245 148 148 0 chr5 108314154 108314208 -94771324 - MER45R DNA AcHobo -609 972 911 4281 202 86 83 chr5 108314254 108315829 -94769703 - MER45R DNA AcHobo -2 1579 1 922 106 106 0 chr5 108315907 108316058 -94769474 - L1MC2 LINE L1 -184 6160 5994 2234 110 0 7 chr5 108316369 108316677 -94768855 - AluSq SINE Alu -7 306 1 219 231 19 0 chr5 108316721 108316773 -94768759 + L2 LINE L2 3219 3271 -1 195 69 0 0 chr5 108316949 108316978 -94768554 + (CA)n Simple_repeat Simple_repeat 1 29 0 24 77 0 0 chr5 108317600 108317652 -94767880 + AT_rich Low_complexity Low_complexity 1 52 0 25 0 0 0 chr5 108318126 108318151 -94767381 + AT_rich Low_complexity Low_complexity 1 25 0 1711 178 7 3 chr5 108319398 108319696 -94765836 - AluJo SINE Alu -13 299 1 248 348 44 22 chr5 108323377 108323512 -94762020 - MIR3 SINE MIR -66 142 5 25835 56 5 8 chr5 108323538 108326885 -94758647 + L1PA4 LINE L1 3 3339 -2807 16806 38 1 0 chr5 108327166 108329994 -94755538 + L1PA4 LINE L1 3321 6152 -3 3207 93 14 5 chr5 108330123 108330563 -94754969 - MLT2A1 LTR ERVL 0 444 1 43231 75 12 10 chr5 108330563 108336208 -94749324 - HERVL-A1-A1 LTR ERVL 0 5654 1 3352 73 7 22 chr5 108336208 108336659 -94748873 - MLT2A1 LTR ERVL 0 444 1 302 388 50 0 chr5 108336719 108336840 -94748692 - L2 LINE L2 -9 3263 3137 23 0 0 0 chr5 108336892 108336915 -94748617 + AT_rich Low_complexity Low_complexity 1 23 0 402 333 64 35 chr5 108337299 108337689 -94747843 + L1ME LINE L1 5396 5805 -365 195 129 0 0 chr5 108337718 108337749 -94747783 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 108338010 108338034 -94747498 + AT_rich Low_complexity Low_complexity 1 24 0 30 27 0 0 chr5 108338045 108338082 -94747450 + AT_rich Low_complexity Low_complexity 1 37 0 403 316 107 20 chr5 108338108 108338605 -94746927 + L1ME2 LINE L1 3860 4399 -1747 330 26 0 0 chr5 108338901 108338940 -94746592 + (CA)n Simple_repeat Simple_repeat 2 40 0 311 329 44 52 chr5 108338952 108339204 -94746328 + L1ME2 LINE L1 4774 5023 -1123 352 276 56 77 chr5 108339220 108339506 -94746026 + L1ME2 LINE L1 4995 5274 -872 295 325 105 32 chr5 108339534 108340066 -94745466 + L1ME2 LINE L1 5311 5881 -283 28 79 0 0 chr5 108340391 108340454 -94745078 + AT_rich Low_complexity Low_complexity 1 63 0 4399 151 11 12 chr5 108340527 108341392 -94744140 + L1PA15 LINE L1 4746 5684 -481 1978 109 20 23 chr5 108341392 108341695 -94743837 + AluSx SINE Alu 1 302 -10 4399 151 11 12 chr5 108341695 108342176 -94743356 + L1PA15 LINE L1 5684 6164 -1 326 255 43 32 chr5 108342347 108342441 -94743091 - MER5B DNA MER1_type 0 178 84 183 349 16 0 chr5 108342797 108342860 -94742672 - MER5A DNA MER1_type -100 89 26 261 239 56 0 chr5 108342966 108343037 -94742495 + L1MC4 LINE L1 7824 7898 -144 259 176 15 15 chr5 108343054 108343122 -94742410 + GA-rich Low_complexity Low_complexity 1 68 0 844 203 7 0 chr5 108343590 108343743 -94741789 - FRAM SINE Alu -25 151 1 264 286 41 31 chr5 108343786 108343884 -94741648 - MER94 DNA DNA 0 134 36 629 316 61 55 chr5 108344231 108344690 -94740842 + L2 LINE L2 2852 3313 0 394 324 14 28 chr5 108344648 108344790 -94740742 + MIR SINE MIR 15 154 -108 * 21 0 0 0 chr5 108344799 108344820 -94740712 + AT_rich Low_complexity Low_complexity 1 21 0 269 349 57 47 chr5 108346481 108346673 -94738859 + MIR3 SINE MIR 2 195 -13 287 321 131 7 chr5 108346821 108346958 -94738574 - MIR3 SINE MIR -18 190 37 285 333 25 0 chr5 108347372 108347453 -94738079 - L2 LINE L2 -52 3220 3138 23 92 0 0 chr5 108347458 108347523 -94738009 + AT_rich Low_complexity Low_complexity 1 65 0 289 193 0 23 chr5 108348086 108348174 -94737358 + GA-rich Low_complexity Low_complexity 3 88 0 21 36 0 0 chr5 108350091 108350119 -94735413 + AT_rich Low_complexity Low_complexity 1 28 0 11611 168 161 15 chr5 108351172 108353507 -94732025 + L1MA3 LINE L1 12 2687 -4878 10101 163 30 12 chr5 108353515 108356612 -94728920 + L1MA3 LINE L1 4564 7714 -10 27 62 0 0 chr5 108356631 108356679 -94728853 + AT_rich Low_complexity Low_complexity 1 48 0 875 297 105 20 chr5 108358216 108358674 -94726858 - L1MC/D LINE L1 -1987 5821 5325 26 30 0 0 chr5 108359117 108359150 -94726382 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr5 108359308 108359330 -94726202 + AT_rich Low_complexity Low_complexity 1 22 0 214 273 45 0 chr5 108359871 108359937 -94725595 + MIR3 SINE MIR 138 206 -2 334 293 69 63 chr5 108361632 108362239 -94723293 + L1MB7 LINE L1 4408 5018 -1128 4533 164 37 17 chr5 108362344 108362563 -94722969 + L1MA8 LINE L1 5381 5594 -697 1682 204 3 0 chr5 108362563 108362872 -94722660 + AluJb SINE Alu 1 310 -2 4533 164 37 17 chr5 108362872 108363541 -94721991 + L1MA8 LINE L1 5594 6287 -4 21 36 0 0 chr5 108363542 108363570 -94721962 + AT_rich Low_complexity Low_complexity 1 28 0 718 177 0 8 chr5 108364020 108364144 -94721388 - AluJb SINE Alu -185 127 5 404 116 0 29 chr5 108364153 108364222 -94721310 - AluJo SINE Alu -14 298 232 * 507 252 6 31 chr5 108364218 108364377 -94721155 - AluJo SINE Alu -157 155 1 321 290 35 38 chr5 108364450 108364717 -94720815 + L1MB7 LINE L1 5679 5945 -239 429 231 17 26 chr5 108365987 108366104 -94719428 - MLT1K LTR MaLR -3 585 470 635 194 75 40 chr5 108366154 108366355 -94719177 + MER3 DNA MER1_type 1 208 -1 263 312 95 21 chr5 108366480 108366624 -94718908 - MLT1L LTR MaLR -345 243 118 21 0 0 0 chr5 108367220 108367241 -94718291 + AT_rich Low_complexity Low_complexity 1 21 0 198 286 0 0 chr5 108367469 108367518 -94718014 - L2 LINE L2 0 3313 3265 2086 104 76 20 chr5 108367700 108368055 -94717477 + THE1C LTR MaLR 1 375 0 383 370 119 24 chr5 108368131 108368828 -94716704 - L2 LINE L2 -367 2947 2185 748 259 99 52 chr5 108370692 108371111 -94714421 + MLT1F1 LTR MaLR 5 439 -128 269 51 26 0 chr5 108371136 108371175 -94714357 + (GA)n Simple_repeat Simple_repeat 1 40 0 365 253 24 0 chr5 108371178 108371261 -94714271 + MLT1F1 LTR MaLR 459 543 -50 472 328 50 8 chr5 108372120 108372361 -94713171 - L3b LINE CR1 -85 1498 1248 302 322 55 35 chr5 108372584 108372783 -94712749 - L3 LINE CR1 -272 1305 1103 208 74 56 56 chr5 108372982 108373036 -94712496 + (TTATA)n Simple_repeat Simple_repeat 4 57 0 312 268 67 134 chr5 108373247 108373560 -94711972 - MER77 LTR ERV1 -261 344 53 4490 282 87 15 chr5 108373569 108375709 -94709823 - L1MEc LINE L1 -4080 2316 22 1200 176 52 40 chr5 108375996 108376246 -94709286 + AluJo SINE Alu 1 253 -59 1953 125 45 23 chr5 108376434 108376787 -94708745 + THE1C LTR MaLR 15 375 0 22 35 0 0 chr5 108376864 108376893 -94708639 + AT_rich Low_complexity Low_complexity 1 29 0 2093 121 6 13 chr5 108377250 108377564 -94707968 + AluSx SINE Alu 1 312 0 369 352 19 6 chr5 108377677 108377839 -94707693 + MIR SINE MIR 25 188 -74 584 329 42 8 chr5 108378166 108378403 -94707129 - MIR SINE MIR -16 246 2 22 0 0 0 chr5 108378914 108378936 -94706596 + AT_rich Low_complexity Low_complexity 1 22 0 1622 50 31 22 chr5 108379340 108379562 -94705970 + L1PA5 LINE L1 5931 6154 0 5949 111 85 8 chr5 108379952 108380966 -94704566 + HERVH LTR ERV1 562 1653 -6060 1047 158 6 6 chr5 108381066 108381237 -94704295 - AluSp SINE Alu -142 171 1 515 119 63 168 chr5 108382654 108382797 -94702735 - MER20 DNA MER1_type -70 149 22 1798 173 16 0 chr5 108383289 108383595 -94701937 - AluJb SINE Alu -1 311 1 23 33 0 0 chr5 108384186 108384216 -94701316 + AT_rich Low_complexity Low_complexity 1 30 0 438 369 86 4 chr5 108384734 108384978 -94700554 + L2 LINE L2 2714 2977 -337 239 175 0 0 chr5 108384977 108385017 -94700515 + L2 LINE L2 3274 3313 0 * 2594 58 0 0 chr5 108385394 108385702 -94699830 - AluY SINE Alu -3 308 1 24 0 0 0 chr5 108385721 108385745 -94699787 + AT_rich Low_complexity Low_complexity 1 24 0 253 323 146 6 chr5 108386089 108386253 -94699279 + MIR SINE MIR 57 243 -19 181 106 43 128 chr5 108386440 108386487 -94699045 + L2 LINE L2 3224 3266 -6 603 190 93 4 chr5 108387201 108387355 -94698177 + L1MB1 LINE L1 6027 6167 -1 24 0 0 0 chr5 108387355 108387379 -94698153 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr5 108388780 108388807 -94696725 + AT_rich Low_complexity Low_complexity 1 27 0 216 0 0 0 chr5 108389041 108389065 -94696467 + (A)n Simple_repeat Simple_repeat 1 24 0 264 167 0 0 chr5 108391800 108391848 -94693684 + A-rich Low_complexity Low_complexity 1 48 0 209 374 11 11 chr5 108391851 108391942 -94693590 + MIR3 SINE MIR 110 200 -8 1556 141 25 94 chr5 108392545 108392907 -94692625 - MER1B DNA MER1_type 0 337 1 620 263 5 63 chr5 108394050 108394240 -94691292 + MLT1F LTR MaLR 4 182 -360 2137 115 0 22 chr5 108394289 108394603 -94690929 - AluSg SINE Alu -3 307 1 270 313 9 62 chr5 108394611 108394723 -94690809 + L2 LINE L2 3136 3241 -31 1773 162 52 27 chr5 108394819 108395147 -94690385 + MER1B DNA MER1_type 2 337 0 487 256 8 8 chr5 108395198 108395319 -94690213 + L1P LINE L1 1 121 -6025 1424 304 67 23 chr5 108595333 108596020 -94489512 - HERV16 LTR ERVL -2667 2329 1613 791 304 14 3 chr5 108596297 108596590 -94488942 - HERV16 LTR ERVL -3770 1226 931 761 238 15 29 chr5 108596625 108596831 -94488701 + MLT1B LTR MaLR 188 390 0 423 197 0 7 chr5 108597899 108598036 -94487496 + CT-rich Low_complexity Low_complexity 1 136 0 463 202 9 26 chr5 108598249 108598363 -94487169 - L1ME1 LINE L1 -7 6159 6048 3367 40 0 0 chr5 108598372 108598775 -94486757 - L1PA3 LINE L1 -3 6152 5750 239 147 17 29 chr5 108601727 108601803 -94483729 + L1MB2 LINE L1 6099 6183 0 420 278 111 11 chr5 108601854 108602034 -94483498 + MIR SINE MIR 52 249 -13 2318 142 48 20 chr5 108602557 108602995 -94482537 + LTR7 LTR ERV1 1 450 0 5055 166 44 36 chr5 108602996 108604126 -94481406 + HERVH LTR ERV1 2 1457 -6256 2439 76 3 13 chr5 108604126 108604440 -94481092 - AluY SINE Alu 0 311 1 5055 166 44 36 chr5 108604440 108604728 -94480804 + HERVH LTR ERV1 1457 1741 -5972 475 84 14 0 chr5 108605556 108605627 -94479905 + THE1A LTR MaLR 284 355 0 357 311 184 26 chr5 108607279 108607546 -94477986 + L2 LINE L2 3005 3313 0 2291 61 10 3 chr5 108608046 108608343 -94477189 - AluY SINE Alu -12 299 1 902 171 38 80 chr5 108609199 108609462 -94476070 - L1MA8 LINE L1 -5 6286 6035 * 2216 151 3 3 chr5 108609458 108609849 -94475683 + L1MA6 LINE L1 5637 6027 -273 306 369 48 16 chr5 108610639 108610826 -94474706 - MIR3 SINE MIR -2 206 14 6867 129 24 6 chr5 108610838 108611864 -94473668 + L1PA8A LINE L1 4247 5315 -816 2181 88 10 7 chr5 108611864 108612171 -94473361 + AluY SINE Alu 1 308 -3 6867 129 24 6 chr5 108612171 108613004 -94472528 + L1PA8A LINE L1 5315 6131 0 33320 47 1 2 chr5 108613553 108617872 -94467660 - L1P LINE L1 -1828 4318 3 247 313 15 0 chr5 108617872 108617939 -94467593 - AluJ/FLAM SINE Alu -233 69 2 184 250 12 60 chr5 108618294 108618378 -94467154 - MER5C DNA MER1_type -204 120 41 604 338 59 0 chr5 108618460 108618679 -94466853 - MIR SINE MIR 0 262 31 201 162 0 0 chr5 108618734 108618771 -94466761 + A-rich Low_complexity Low_complexity 1 37 0 1413 156 11 25 chr5 108620137 108620412 -94465120 + THE1A LTR MaLR 1 271 -84 216 158 0 0 chr5 108620420 108620458 -94465074 + T-rich Low_complexity Low_complexity 1 38 0 6958 224 25 22 chr5 108621721 108623710 -94461822 - L1 LINE L1 -1773 4373 2380 1600 164 65 35 chr5 108623711 108623970 -94461562 - MSTC LTR MaLR -62 356 94 1833 155 7 3 chr5 108623970 108624266 -94461266 - AluSx SINE Alu -15 297 1 1600 164 65 35 chr5 108624266 108624353 -94461179 - MSTC LTR MaLR -324 94 11 307 304 32 0 chr5 108624757 108624915 -94460617 - MER103 DNA DNA -1 165 3 503 302 108 55 chr5 108626713 108626788 -94458744 + L2 LINE L2 2950 3020 -293 1881 185 42 17 chr5 108626788 108627144 -94458388 - MLT1A1 LTR MaLR 0 365 1 503 302 108 55 chr5 108627144 108627412 -94458120 + L2 LINE L2 3020 3311 -2 701 215 40 6 chr5 108627594 108627771 -94457761 + MER58A DNA MER1_type 42 224 0 1766 171 18 0 chr5 108628094 108628375 -94457157 - AluJb SINE Alu -26 286 1 227 351 11 0 chr5 108628479 108628573 -94456959 + L2 LINE L2 2565 2659 -655 563 260 53 0 chr5 108628603 108628753 -94456779 - MER5A DNA MER1_type -1 188 31 469 279 100 13 chr5 108629363 108629592 -94455940 + L1ME LINE L1 5522 5770 -351 264 319 43 0 chr5 108630207 108630301 -94455231 + MIR SINE MIR 2 99 -163 246 198 0 74 chr5 108630402 108630483 -94455049 - L1MC4 LINE L1 -2044 5998 5924 1006 228 40 5 chr5 108630484 108630882 -94454650 + L1ME LINE L1 5144 5554 -608 1957 133 34 57 chr5 108631369 108631753 -94453779 - THE1C LTR MaLR 0 375 1 1479 172 40 7 chr5 108631934 108632207 -94453325 + AluJb SINE Alu 12 293 -19 2272 150 6 3 chr5 108632406 108632767 -94452765 + THE1B LTR MaLR 1 362 -2 3957 113 5 5 chr5 108632767 108633420 -94452112 - L1PA8 LINE L1 -905 5241 4589 6577 73 15 13 chr5 108633421 108633986 -94451546 + L1PA8 LINE L1 5254 5823 -349 2263 125 0 0 chr5 108633986 108634297 -94451235 + AluSx SINE Alu 1 311 -1 6577 73 15 13 chr5 108634297 108634645 -94450887 + L1PA8 LINE L1 5823 6169 -3 5607 198 77 59 chr5 108634796 108635872 -94449660 + L1MC3 LINE L1 6016 7211 -574 320 234 0 13 chr5 108635872 108635949 -94449583 + MLT1F1 LTR MaLR 49 124 -443 5607 198 77 59 chr5 108635949 108636526 -94449006 + L1MC3 LINE L1 7211 7776 -9 21 36 0 0 chr5 108636750 108636778 -94448754 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 108638092 108638115 -94447417 + AT_rich Low_complexity Low_complexity 1 23 0 272 27 27 0 chr5 108638476 108638513 -94447019 + (TG)n Simple_repeat Simple_repeat 1 38 0 300 53 0 0 chr5 108640063 108640101 -94445431 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 356 322 50 35 chr5 108640872 108641071 -94444461 + MIR SINE MIR 20 221 -41 185 321 0 0 chr5 108641613 108641666 -94443866 + L2 LINE L2 3007 3059 -213 273 255 142 0 chr5 108641969 108642075 -94443457 + MLT1J2 LTR MaLR 40 160 -290 433 277 36 0 chr5 108642386 108642523 -94443009 + LTR16A LTR ERVL 297 438 -12 1786 41 0 0 chr5 108642578 108642797 -94442735 + L1PA5 LINE L1 5929 6147 -7 232 214 0 0 chr5 108642981 108643023 -94442509 + MIR SINE MIR 113 154 -108 279 79 0 0 chr5 108643148 108643186 -94442346 + (CCA)n Simple_repeat Simple_repeat 1 38 0 2070 132 71 13 chr5 108645488 108645882 -94439650 - MSTA LTR MaLR -11 417 1 1130 274 131 12 chr5 108645882 108646552 -94438980 + L2 LINE L2 2551 3312 -1 327 378 64 20 chr5 108647101 108647305 -94438227 - L3 LINE CR1 -2 1575 1363 207 308 203 21 chr5 108648215 108648358 -94437174 + MIR3 SINE MIR 30 198 -10 393 297 67 19 chr5 108648665 108648874 -94436658 + LTR33 LTR ERVL 298 516 -5 232 196 20 0 chr5 108649522 108649573 -94435959 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 350 275 178 74 chr5 108649840 108650149 -94435383 + L2 LINE L2 2937 3277 -36 29 0 0 0 chr5 108650155 108650184 -94435348 + AT_rich Low_complexity Low_complexity 1 29 0 193 212 59 47 chr5 108650232 108650317 -94435215 - L2 LINE L2 -229 3084 2999 907 220 43 0 chr5 108650537 108650746 -94434786 + MER20 DNA MER1_type 2 219 0 512 223 11 0 chr5 108650952 108651046 -94434486 - Tigger7 DNA MER2_type 0 2587 2493 822 207 0 4 chr5 108651050 108651237 -94434295 - Tigger7 DNA MER2_type -466 267 1 1547 212 128 0 chr5 108651282 108651627 -94433905 - MSTD LTR MaLR -7 389 1 1981 169 17 15 chr5 108651882 108652348 -94433184 - L1MB1 LINE L1 -2 6166 5731 249 180 0 0 chr5 108652348 108652398 -94433134 + (CA)n Simple_repeat Simple_repeat 1 50 0 4586 174 42 13 chr5 108652455 108653398 -94432134 - L1MA8 LINE L1 -1 6290 5320 2133 152 0 27 chr5 108653407 108653775 -94431757 - L1PB3 LINE L1 -8 6146 5789 180 176 0 0 chr5 108653775 108653809 -94431723 + (TG)n Simple_repeat Simple_repeat 2 35 0 912 127 0 7 chr5 108653814 108653956 -94431576 - L1PB3 LINE L1 -363 5791 5651 367 141 59 35 chr5 108653939 108654024 -94431508 - L1M3 LINE L1 -526 5808 5722 * 21 36 0 0 chr5 108654881 108654909 -94430623 + AT_rich Low_complexity Low_complexity 1 28 0 2388 151 82 44 chr5 108655055 108655408 -94430124 - L1MC2 LINE L1 -9 6335 5952 2286 66 42 0 chr5 108655408 108655697 -94429835 - AluY SINE Alu -10 301 1 2388 151 82 44 chr5 108655697 108655892 -94429640 - L1MC2 LINE L1 -392 5952 5766 233 297 0 0 chr5 108656507 108656581 -94428951 + (TA)n Simple_repeat Simple_repeat 2 75 0 200 288 14 27 chr5 108660263 108660336 -94425196 - L2 LINE L2 -13 3259 3188 2433 146 25 37 chr5 108660482 108660915 -94424617 - MSTA LTR MaLR 0 428 1 207 69 0 0 chr5 108662495 108662524 -94423008 + (TTTTTA)n Simple_repeat Simple_repeat 6 34 0 6468 249 62 52 chr5 108662548 108665601 -94419931 - L1ME1 LINE L1 -2 6959 3997 1820 166 3 0 chr5 108665601 108665914 -94419618 - AluSx SINE Alu 0 314 1 6468 249 62 52 chr5 108665914 108666352 -94419180 - L1ME1 LINE L1 -2964 3997 3565 359 326 78 59 chr5 108666355 108666742 -94418790 - L1ME1 LINE L1 -5212 1211 818 19896 173 25 16 chr5 108667129 108670718 -94414814 - L1 LINE L1 -3828 3737 114 1445 213 7 11 chr5 108670718 108671005 -94414527 - AluJb SINE Alu -25 287 2 19896 173 25 16 chr5 108671005 108671104 -94414428 - L1 LINE L1 -7451 114 17 327 25 0 0 chr5 108672140 108672180 -94413352 + (CA)n Simple_repeat Simple_repeat 2 41 0 426 324 50 17 chr5 108672333 108672512 -94413020 - MIR3 SINE MIR -6 202 18 203 303 131 10 chr5 108673720 108673819 -94411713 - MIR SINE MIR 0 262 152 551 255 61 26 chr5 108676849 108677080 -94408452 + MER112 DNA MER1_type 1 239 -21 28 29 0 0 chr5 108677660 108677695 -94407837 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 6 0 chr5 108677747 108677812 -94407720 + AT_rich Low_complexity Low_complexity 1 31 0 4020 152 43 13 chr5 108678223 108678996 -94406536 - Ricksha DNA DNA -8 3243 2444 7573 24 1 1 chr5 108678996 108679891 -94405641 + L1PA3 LINE L1 5261 6155 0 4812 129 14 20 chr5 108679914 108680704 -94404828 - Ricksha DNA DNA -774 2472 1688 650 167 86 5 chr5 108680703 108680879 -94404653 - Ricksha DNA DNA -2962 284 2 * 1871 253 57 25 chr5 108681069 108681582 -94403950 - MLT1F LTR MaLR -13 529 1 209 313 76 35 chr5 108682599 108682743 -94402789 + MIR SINE MIR 12 161 -101 246 229 31 0 chr5 108683315 108683411 -94402121 + (TA)n Simple_repeat Simple_repeat 2 100 0 315 0 0 0 chr5 108683411 108683446 -94402086 + (TG)n Simple_repeat Simple_repeat 2 36 0 1051 187 0 0 chr5 108684637 108684819 -94400713 - MLT1F1 LTR MaLR 0 567 386 396 281 67 22 chr5 108685147 108685282 -94400250 - MLT1F1 LTR MaLR -250 317 177 285 207 0 0 chr5 108685284 108685371 -94400161 + GA-rich Low_complexity Low_complexity 2 88 0 2021 166 14 131 chr5 108685819 108686046 -94399486 + MLT1D LTR MaLR 1 253 -252 2387 96 0 0 chr5 108686046 108686349 -94399183 + AluSg SINE Alu 1 303 -7 2021 166 14 131 chr5 108686349 108686693 -94398839 + MLT1D LTR MaLR 253 505 0 189 0 0 0 chr5 108687679 108687700 -94397832 + (A)n Simple_repeat Simple_repeat 1 21 0 2533 88 25 22 chr5 108689680 108690043 -94395489 + THE1B LTR MaLR 1 364 0 959 183 17 0 chr5 108690432 108690607 -94394925 - MER45A DNA AcHobo 0 178 1 871 302 93 43 chr5 108691803 108692243 -94393289 - LTR16B LTR ERVL -2 462 1 258 179 0 0 chr5 108693600 108693639 -94391893 - MER2 DNA MER2_type -305 40 2 2193 226 53 29 chr5 108693640 108694296 -94391236 + L1MD2 LINE L1 5688 6359 0 321 289 154 0 chr5 108694296 108694400 -94391132 - MER5B DNA MER1_type -54 124 5 231 195 24 0 chr5 108694550 108694591 -94390941 - MER2 DNA MER2_type -292 53 12 259 226 0 0 chr5 108694591 108694644 -94390888 + L1MC/D LINE L1 5688 5740 -619 218 306 10 41 chr5 108695418 108695516 -94390016 - L2 LINE L2 -241 3031 2937 23 0 0 0 chr5 108696615 108696638 -94388894 + AT_rich Low_complexity Low_complexity 1 23 0 260 255 38 94 chr5 108697181 108697287 -94388245 - MER5B DNA MER1_type -1 177 78 3457 129 13 15 chr5 108698988 108699515 -94386017 - MER1A DNA MER1_type -1 526 1 22 0 0 0 chr5 108701197 108701219 -94384313 + AT_rich Low_complexity Low_complexity 1 22 0 627 246 55 22 chr5 108702397 108702580 -94382952 + MER5A DNA MER1_type 1 189 0 1504 181 29 7 chr5 108703197 108703473 -94382059 + AluJo SINE Alu 1 282 -30 452 143 12 0 chr5 108703477 108703561 -94381971 + GA-rich Low_complexity Low_complexity 3 87 0 202 200 0 0 chr5 108705006 108705041 -94380491 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 108706114 108706136 -94379396 + AT_rich Low_complexity Low_complexity 1 22 0 306 349 24 8 chr5 108706975 108707101 -94378431 - MIR3 SINE MIR -2 206 79 263 403 36 60 chr5 108707647 108707895 -94377637 - L2 LINE L2 -25 3247 3006 406 313 54 9 chr5 108708217 108708329 -94377203 - L2 LINE L2 0 3313 3197 12484 157 9 8 chr5 108709590 108711728 -94373804 + HERVH LTR ERV1 1854 3993 -3720 3391 167 2 2 chr5 108711745 108712327 -94373205 + HERVH LTR ERV1 3994 4548 -3171 2496 168 2 5 chr5 108712322 108712756 -94372776 + HERVH LTR ERV1 6516 6948 -765 * 335 109 0 78 chr5 108712742 108712806 -94372726 + HERVH LTR ERV1 7655 7713 0 * 3481 124 7 9 chr5 108712807 108713347 -94372185 + HERVH LTR ERV1 7173 7711 -2 2147 136 0 0 chr5 108713347 108713649 -94371883 + AluY SINE Alu 1 302 -9 2324 149 38 23 chr5 108713657 108714100 -94371432 + LTR7 LTR ERV1 1 450 0 2018 137 76 17 chr5 108714159 108714503 -94371029 - THE1B LTR MaLR 0 364 1 11594 101 6 1 chr5 108714508 108716074 -94369458 - THE1B-int LTR MaLR -6 1574 1 2030 145 72 17 chr5 108716074 108716419 -94369113 - THE1B LTR MaLR 0 364 1 1124 299 107 16 chr5 108716543 108716908 -94368624 - LTR16A LTR ERVL 0 450 53 192 360 0 0 chr5 108717941 108717991 -94367541 - MIR SINE MIR -157 105 56 34 24 0 0 chr5 108718160 108718201 -94367331 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr5 108718393 108718417 -94367115 + AT_rich Low_complexity Low_complexity 1 24 0 2064 118 31 3 chr5 108718777 108719065 -94366467 - AluSx SINE Alu -16 296 1 22 35 0 0 chr5 108719269 108719298 -94366234 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 108719377 108719407 -94366125 + AT_rich Low_complexity Low_complexity 1 30 0 1085 80 0 53 chr5 108719439 108719589 -94365943 + AluSg/x SINE Alu 152 293 -19 24 67 0 0 chr5 108720146 108720191 -94365341 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 108720544 108720566 -94364966 + AT_rich Low_complexity Low_complexity 1 22 0 1973 244 15 54 chr5 108720831 108721425 -94364107 + L1MA8 LINE L1 467 1037 -6452 13084 183 69 31 chr5 108721469 108723929 -94361603 + L1MA8 LINE L1 3062 5759 -1951 2133 108 3 3 chr5 108723929 108724224 -94361308 + AluSx SINE Alu 1 295 -17 13084 183 69 31 chr5 108724224 108725790 -94359742 + L1MA8 LINE L1 5759 7264 -446 281 263 120 113 chr5 108725953 108726394 -94359138 + HAL1b LINE L1 292 735 -613 22 0 0 0 chr5 108726413 108726435 -94359097 + AT_rich Low_complexity Low_complexity 1 22 0 364 333 37 77 chr5 108726627 108726873 -94358659 + L1MC4 LINE L1 6493 6728 -1314 225 242 16 32 chr5 108726888 108726950 -94358582 + L1MC4a LINE L1 6621 6681 -1127 202 316 0 0 chr5 108727494 108727551 -94357981 - MIR SINE MIR -108 154 98 2032 107 7 0 chr5 108728953 108729224 -94356308 - AluSx SINE Alu -39 273 1 21 57 0 0 chr5 108729564 108729599 -94355933 + AT_rich Low_complexity Low_complexity 1 35 0 469 280 220 10 chr5 108731372 108731572 -94353960 + MIR SINE MIR 8 249 -13 214 419 59 5 chr5 108731608 108731759 -94353773 + L2 LINE L2 2744 2908 -406 219 69 0 0 chr5 108731759 108731788 -94353744 + (TTGG)n Simple_repeat Simple_repeat 4 32 0 214 419 59 5 chr5 108731788 108731822 -94353710 + L2 LINE L2 2908 2939 -375 2393 87 0 3 chr5 108732036 108732345 -94353187 + AluSp SINE Alu 1 308 -5 319 262 146 10 chr5 108732371 108732474 -94353058 - MIR SINE MIR -143 119 3 8642 44 0 1 chr5 108732852 108734694 -94350838 + L1PA3 LINE L1 4311 6152 -3 22 0 0 0 chr5 108734694 108734716 -94350816 + AT_rich Low_complexity Low_complexity 1 22 0 301 174 0 0 chr5 108734732 108734778 -94350754 + FAM SINE Alu 56 101 -74 12251 184 30 57 chr5 108734782 108738961 -94346571 + L1MA4 LINE L1 6 4033 -2449 325 88 12 175 chr5 108738961 108739041 -94346491 + MADE1 DNA Mariner 9 75 -5 12251 184 30 57 chr5 108739041 108741070 -94344462 + L1MA4 LINE L1 4033 6115 -367 1071 211 91 46 chr5 108741137 108741553 -94343979 - Charlie1b DNA MER1_type -57 466 32 234 91 0 0 chr5 108742744 108742777 -94342755 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2275 88 0 3 chr5 108742914 108743228 -94342304 - AluSp SINE Alu 0 313 1 821 184 112 72 chr5 108743368 108743618 -94341914 + ORSL DNA AcHobo 1 260 -15 5082 250 41 34 chr5 108743621 108746817 -94338715 - L1PA13 LINE L1 -3125 3672 41 194 288 68 27 chr5 108747789 108747862 -94337670 + L2 LINE L2 3148 3223 -49 647 144 9 0 chr5 108748099 108748210 -94337322 + L1PA15 LINE L1 6045 6156 -9 203 348 85 25 chr5 108748667 108748785 -94336747 + L2 LINE L2 3147 3271 -1 601 263 59 12 chr5 108748863 108749199 -94336333 + L1MC5 LINE L1 7250 7509 -452 528 283 72 43 chr5 108749246 108749522 -94336010 + L1MC5 LINE L1 7609 7892 -69 229 274 48 12 chr5 108749538 108749622 -94335910 + MIR SINE MIR 175 261 -1 421 268 30 30 chr5 108749699 108749863 -94335669 + L1ME LINE L1 867 1030 -5901 551 267 57 22 chr5 108750378 108750669 -94334863 + L1ME LINE L1 1300 1532 -4891 23 33 0 0 chr5 108750670 108750700 -94334832 + AT_rich Low_complexity Low_complexity 1 30 0 1394 192 31 27 chr5 108751860 108752152 -94333380 + AluJo SINE Alu 1 293 -19 624 180 0 0 chr5 108752290 108752412 -94333120 + L1PB4 LINE L1 6032 6153 -3 310 335 94 16 chr5 108754065 108754250 -94331282 - MIR SINE MIR -63 145 1 595 295 132 0 chr5 108754623 108754813 -94330719 - MIR SINE MIR 0 262 48 4706 154 38 54 chr5 108755443 108757326 -94328206 - L1MA8 LINE L1 -86 6205 4353 1888 256 62 7 chr5 108757383 108757978 -94327554 - L1MEc LINE L1 -5341 1055 428 866 229 133 35 chr5 108757984 108758464 -94327068 + L1ME LINE L1 556 1082 -4988 243 147 0 59 chr5 108758464 108758532 -94327000 - LTR66 LTR ERVL -152 458 395 243 170 0 0 chr5 108758579 108758626 -94326906 + (TA)n Simple_repeat Simple_repeat 1 47 0 35 0 0 0 chr5 108758669 108758704 -94326828 + AT_rich Low_complexity Low_complexity 1 35 0 938 235 94 35 chr5 108758710 108759136 -94326396 + L1ME LINE L1 1129 1579 -4501 740 250 0 28 chr5 108760314 108760490 -94325042 - MER45A DNA AcHobo 0 178 8 838 326 53 27 chr5 108761304 108762166 -94323366 - L1ME3A LINE L1 -290 5880 4999 329 318 19 9 chr5 108762404 108762511 -94323021 + L3 LINE CR1 1374 1481 -96 506 262 0 60 chr5 108764409 108764558 -94320974 - MIR SINE MIR -17 245 106 239 292 62 0 chr5 108766190 108766255 -94319277 + L1MC4 LINE L1 5743 5811 -1997 253 250 80 0 chr5 108766262 108766350 -94319182 - L1MC4 LINE L1 -1334 6708 6614 230 282 35 0 chr5 108766276 108766361 -94319171 + L1MC4 LINE L1 6615 6702 -1340 * 209 136 0 23 chr5 108766362 108766406 -94319126 + (TA)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr5 108766816 108766841 -94318691 + AT_rich Low_complexity Low_complexity 1 25 0 5950 156 16 1 chr5 108767270 108768333 -94317199 - L1MA3 LINE L1 -8 6297 5219 258 163 0 0 chr5 108768331 108768380 -94317152 - L1P LINE L1 -1463 4683 4635 * 2029 93 66 18 chr5 108768377 108768711 -94316821 - L1M1 LINE L1 -4981 2584 2235 1105 213 35 16 chr5 108768700 108768954 -94316578 - L1M1 LINE L1 -7294 271 13 * 1974 231 32 17 chr5 108768952 108769480 -94316052 - L1 LINE L1 -3313 2833 2298 216 333 29 75 chr5 108819868 108820042 -94265490 + MIR SINE MIR 47 212 -50 286 287 11 11 chr5 108820692 108820779 -94264753 - MLT1J2 LTR MaLR 0 450 364 322 169 67 45 chr5 108820913 108821002 -94264530 - MLT1J2 LTR MaLR -296 154 64 942 300 70 5 chr5 108822339 108822742 -94262790 + LTR16B LTR ERVL 35 463 -1 1796 335 49 13 chr5 108822788 108823833 -94261699 + HERV16 LTR ERVL 104 1185 -3811 2386 301 63 38 chr5 108824277 108824799 -94260733 + HERV16 LTR ERVL 1854 2362 -2634 2065 136 12 35 chr5 108824799 108825144 -94260388 - MER1B DNA MER1_type 0 337 1 2386 301 63 38 chr5 108825144 108826453 -94259079 + HERV16 LTR ERVL 2362 3555 -1441 4003 137 49 80 chr5 108826462 108827272 -94258260 + LTR1 LTR ERV1 1 785 0 533 250 29 58 chr5 108827281 108827521 -94258011 + HERV16 LTR ERVL 3323 3555 -1441 796 329 35 37 chr5 108827555 108828072 -94257460 + HERV16 LTR ERVL 3878 4393 -1371 2522 123 0 2 chr5 108828083 108828482 -94257050 + L1PA4 LINE L1 5388 5785 -380 7723 173 35 8 chr5 108828559 108829065 -94256467 + L1PBa LINE L1 1398 1889 -4973 2132 45 0 4 chr5 108829065 108829332 -94256200 + L1PA4 LINE L1 5887 6152 -3 7723 173 35 8 chr5 108829332 108831962 -94253570 + L1PBa LINE L1 1889 4617 -2245 1145 51 13 0 chr5 108831960 108832117 -94253415 - L1PA8A LINE L1 -242 5889 5731 * 2584 111 45 76 chr5 108832117 108832223 -94253309 + L1PB1 LINE L1 5678 5786 -365 214 29 57 0 chr5 108832223 108832258 -94253274 + (TA)n Simple_repeat Simple_repeat 1 37 0 2584 111 45 76 chr5 108832258 108832637 -94252895 + L1PB1 LINE L1 5786 6149 -2 2318 121 54 0 chr5 108832642 108833013 -94252519 + L1PA15 LINE L1 5775 6165 0 227 352 0 0 chr5 108834536 108834607 -94250925 - L2 LINE L2 -217 3055 2985 251 246 49 66 chr5 108834674 108834796 -94250736 + MIR SINE MIR 95 214 -48 251 374 108 7 chr5 108835004 108835143 -94250389 - L2 LINE L2 -4 3268 3116 286 128 0 0 chr5 108835897 108835944 -94249588 + MADE1 DNA Mariner 1 47 -33 389 323 20 26 chr5 108836186 108836381 -94249151 - MLT1I LTR MaLR -197 212 19 1920 95 7 22 chr5 108837996 108838270 -94247262 + AluSc SINE Alu 30 299 -10 24 0 0 0 chr5 108838612 108838636 -94246896 + AT_rich Low_complexity Low_complexity 1 24 0 1395 105 37 77 chr5 108839041 108839366 -94246166 - L1MA9 LINE L1 0 6312 6001 487 360 11 6 chr5 108839737 108839912 -94245620 - MIR SINE MIR -42 220 45 985 228 61 9 chr5 108840356 108840584 -94244948 + MIR SINE MIR 2 241 -21 520 312 74 0 chr5 108841859 108842074 -94243458 - MIR SINE MIR 0 262 32 180 341 30 30 chr5 108842327 108842459 -94243073 - L2 LINE L2 -335 2978 2847 679 250 11 6 chr5 108842836 108843012 -94242520 + MER5B DNA MER1_type 1 177 -1 4869 85 12 0 chr5 108843450 108844106 -94241426 + L1PA11 LINE L1 5508 6171 -3 2816 10 0 0 chr5 108844603 108844908 -94240624 + AluY SINE Alu 1 305 -6 593 285 32 95 chr5 108845616 108845932 -94239600 - L2 LINE L2 0 3272 2977 24 53 0 0 chr5 108847517 108847555 -94237977 + AT_rich Low_complexity Low_complexity 1 38 0 2180 95 0 14 chr5 108848257 108848552 -94236980 + AluSx SINE Alu 11 301 -11 283 367 39 8 chr5 108848898 108849026 -94236506 - L2 LINE L2 -3 3310 3179 375 23 0 0 chr5 108850285 108850329 -94235203 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 0 0 0 chr5 108850520 108850550 -94234982 + AT_rich Low_complexity Low_complexity 1 30 0 2029 147 0 7 chr5 108851278 108851578 -94233954 + AluSx SINE Alu 1 298 -14 423 335 21 5 chr5 108851737 108851931 -94233601 - MER117 DNA MER1_type 0 197 1 501 280 8 0 chr5 108852048 108852166 -94233366 + MER58A DNA MER1_type 1 119 0 1404 104 14 0 chr5 108852523 108852743 -94232789 - L1MA5 LINE L1 0 6300 6078 2067 133 30 33 chr5 108852804 108853172 -94232360 - L1MA5 LINE L1 -224 6076 5710 770 191 162 15 chr5 108854904 108855108 -94230424 + MIR SINE MIR 12 245 -17 209 207 0 52 chr5 108855416 108855474 -94230058 + A-rich Low_complexity Low_complexity 1 55 0 427 353 22 16 chr5 108856275 108856459 -94229073 - MER5A DNA MER1_type -3 186 2 192 392 31 8 chr5 108856922 108857052 -94228480 - L2 LINE L2 -467 2847 2715 469 304 80 0 chr5 108857292 108857430 -94228102 - L2 LINE L2 -5 3308 3160 564 226 190 62 chr5 108857546 108857772 -94227760 + Charlie8 DNA MER1_type 1 255 -2162 281 312 0 0 chr5 108857846 108857923 -94227609 + Charlie8 DNA MER1_type 2339 2415 -2 269 272 107 70 chr5 108858184 108858456 -94227076 + L2 LINE L2 2951 3232 -40 188 322 0 0 chr5 108859043 108859102 -94226430 - MIR SINE MIR -128 134 76 34 0 0 0 chr5 108859401 108859435 -94226097 + AT_rich Low_complexity Low_complexity 1 34 0 326 249 24 160 chr5 108860181 108860394 -94225138 + MER5A DNA MER1_type 1 184 -5 298 301 36 0 chr5 108860503 108860586 -94224946 - L2 LINE L2 -46 3267 3182 28 29 0 0 chr5 108861863 108861898 -94223634 + AT_rich Low_complexity Low_complexity 1 35 0 208 296 0 0 chr5 108862661 108862715 -94222817 + L3 LINE CR1 1220 1273 -304 287 313 102 0 chr5 108862765 108862893 -94222639 - MIR SINE MIR -15 247 107 1041 259 170 53 chr5 108862950 108863546 -94221986 + L2 LINE L2 2394 3050 -263 1895 123 4 11 chr5 108863707 108863976 -94221556 - AluSx SINE Alu -45 267 1 1233 156 83 0 chr5 108864216 108864434 -94221098 + MER46A DNA MER2_type 1 236 0 36 0 0 0 chr5 108864570 108864606 -94220926 + AT_rich Low_complexity Low_complexity 1 36 0 700 249 124 0 chr5 108865292 108865493 -94220039 + MLT2E LTR ERVL 1 226 -402 190 143 0 71 chr5 108866002 108866058 -94219474 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 620 204 30 8 chr5 108866058 108866190 -94219342 - MER4C LTR ERV1 0 465 331 615 159 114 182 chr5 108866246 108866604 -94218928 - MER4C LTR ERV1 -122 343 10 226 185 46 15 chr5 108866604 108866669 -94218863 + (TA)n Simple_repeat Simple_repeat 1 67 0 203 162 0 0 chr5 108866668 108866705 -94218827 + GA-rich Low_complexity Low_complexity 2 38 0 * 281 320 44 84 chr5 108866745 108867089 -94218443 + L2 LINE L2 2938 3267 -5 198 219 0 0 chr5 108867305 108867346 -94218186 - MER5B DNA MER1_type -7 171 131 1722 133 37 14 chr5 108867410 108867538 -94217994 + AluSq SINE Alu 3 126 -187 2155 116 3 0 chr5 108867538 108867832 -94217700 + AluSg SINE Alu 1 295 -15 1722 133 37 14 chr5 108867832 108867997 -94217535 + AluSq SINE Alu 126 303 -10 26 30 0 0 chr5 108868258 108868291 -94217241 + AT_rich Low_complexity Low_complexity 1 33 0 2247 116 0 7 chr5 108868770 108869073 -94216459 + AluSx SINE Alu 1 301 -11 2192 109 3 0 chr5 108869717 108870010 -94215522 + AluY SINE Alu 1 294 -17 7037 152 18 20 chr5 108870482 108870703 -94214829 + L1PB1 LINE L1 3754 3974 -2177 7668 18 3 4 chr5 108870703 108871629 -94213903 + L1PA3 LINE L1 5231 6155 0 7037 152 18 20 chr5 108871629 108873815 -94211717 + L1PB1 LINE L1 3974 6148 -3 254 48 71 0 chr5 108873897 108873939 -94211593 + CT-rich Low_complexity Low_complexity 5 49 0 219 36 0 0 chr5 108873941 108873969 -94211563 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 748 231 0 0 chr5 108873970 108874113 -94211419 - FRAM SINE Alu -33 143 1 1321 212 59 59 chr5 108875458 108875552 -94209980 - MER39 LTR ERV1 -59 648 555 2262 115 3 0 chr5 108875552 108875856 -94209676 + AluSx SINE Alu 1 305 -7 1321 212 59 59 chr5 108875856 108876213 -94209319 - MER39 LTR ERV1 -152 555 9 216 0 0 0 chr5 108876379 108876403 -94209129 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 603 253 100 4 chr5 108876885 108877108 -94208424 + L1MC4 LINE L1 6439 6689 -1325 25 0 0 0 chr5 108877112 108877137 -94208395 + AT_rich Low_complexity Low_complexity 1 25 0 2701 96 11 8 chr5 108879700 108880074 -94205458 + THE1C LTR MaLR 1 375 0 6335 174 24 22 chr5 108880388 108881377 -94204155 - L1PA13 LINE L1 -14 6149 5163 2146 112 3 3 chr5 108881377 108881671 -94203861 - AluSc SINE Alu -14 295 2 6335 174 24 22 chr5 108881671 108882766 -94202766 - L1PA13 LINE L1 -1000 5163 4056 1926 139 24 3 chr5 108882964 108883258 -94202274 + AluSx SINE Alu 1 300 -12 34 24 0 0 chr5 108883435 108883476 -94202056 + AT_rich Low_complexity Low_complexity 1 41 0 1373 243 0 7 chr5 108883651 108883935 -94201597 + AluJo SINE Alu 1 282 -30 10168 88 2 5 chr5 108883943 108886134 -94199398 + L1PA7 LINE L1 3953 6148 -6 2228 110 3 0 chr5 108886211 108886519 -94199013 - AluSp SINE Alu -4 309 1 279 0 0 0 chr5 108888203 108888234 -94197298 + (TC)n Simple_repeat Simple_repeat 1 31 0 3894 35 0 0 chr5 108890092 108890582 -94194950 + L1PA3 LINE L1 5679 6168 0 2119 126 0 10 chr5 108892144 108892446 -94193086 + AluSx SINE Alu 1 299 -13 811 196 0 0 chr5 108893280 108893413 -94192119 - FLAM_C SINE Alu 0 133 1 881 226 41 36 chr5 108893414 108893635 -94191897 + MLT1J1 LTR MaLR 36 257 -189 898 269 25 4 chr5 108894353 108894598 -94190934 + MIR SINE MIR 13 262 0 1904 169 7 0 chr5 108895394 108895695 -94189837 + AluSx SINE Alu 1 303 -9 769 164 0 0 chr5 108895738 108895860 -94189672 - FLAM_C SINE Alu -21 122 1 198 294 63 71 chr5 108896270 108896396 -94189136 + MIR SINE MIR 132 256 -6 1754 161 23 13 chr5 108896451 108896756 -94188776 + AluJb SINE Alu 5 312 0 22 35 0 0 chr5 108898543 108898572 -94186960 + AT_rich Low_complexity Low_complexity 1 29 0 2889 217 23 19 chr5 108898980 108899630 -94185902 - MER82 DNA MER2_type 0 653 1 1098 62 0 0 chr5 108901612 108901937 -94183595 + AluSp SINE Alu 3 327 0 1838 222 98 75 chr5 108901983 108903120 -94182412 + L1MEc LINE L1 163 1322 -4893 1116 236 42 2 chr5 108903101 108903447 -94182085 + L1MEc LINE L1 1535 1853 -861 * 5960 127 17 25 chr5 108903467 108904482 -94181050 + L1P LINE L1 11 1017 -5129 7049 54 3 10 chr5 108904482 108905544 -94179988 + L1PA5 LINE L1 5099 6154 0 294 243 232 33 chr5 108905652 108906101 -94179431 + L1MEc LINE L1 2187 2724 -3491 422 332 52 31 chr5 108906127 108906320 -94179212 + L1MEc LINE L1 1540 1791 -785 21 0 0 0 chr5 108906543 108906564 -94178968 + AT_rich Low_complexity Low_complexity 1 21 0 263 250 28 9 chr5 108906893 108907001 -94178531 + L1MEc LINE L1 2451 2560 -3655 22 0 0 0 chr5 108908001 108908023 -94177509 + AT_rich Low_complexity Low_complexity 1 22 0 311 336 37 0 chr5 108908153 108908260 -94177272 + L2 LINE L2 3155 3265 -7 23291 161 12 24 chr5 108908339 108913680 -94171852 + L1PA10 LINE L1 10 5411 -1072 2265 114 3 0 chr5 108913680 108913977 -94171555 + AluSx SINE Alu 5 302 -10 23291 161 12 24 chr5 108913977 108915027 -94170505 + L1PA10 LINE L1 5411 6472 -11 255 31 0 0 chr5 108915029 108915061 -94170471 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 300 328 48 32 chr5 108915763 108915888 -94169644 + L2 LINE L2 3121 3247 -25 351 311 187 5 chr5 108915902 108916121 -94169411 + MIR SINE MIR 1 259 -3 1529 142 93 68 chr5 108916628 108916699 -94168833 - THE1C LTR MaLR 0 375 307 1875 166 23 0 chr5 108916699 108917000 -94168532 + AluSx SINE Alu 1 308 -4 1529 142 93 68 chr5 108917000 108917294 -94168238 - THE1C LTR MaLR -68 307 1 23 54 0 0 chr5 108917790 108917827 -94167705 + AT_rich Low_complexity Low_complexity 1 37 0 2066 116 0 44 chr5 108918144 108918462 -94167070 - AluSx SINE Alu -8 304 1 1356 159 159 85 chr5 108918604 108919039 -94166493 - MLT1C LTR MaLR 0 467 1 744 189 0 8 chr5 108919051 108919183 -94166349 - FLAM_C SINE Alu -2 131 1 1075 171 0 0 chr5 108919961 108920136 -94165396 + FRAM SINE Alu 1 175 -1 438 206 29 20 chr5 108920439 108920541 -94164991 - FLAM_A SINE Alu -23 119 17 11779 125 14 36 chr5 108920684 108922809 -94162723 + HERVH LTR ERV1 910 2987 -4726 2632 152 2 0 chr5 108922803 108923250 -94162282 + HERVH LTR ERV1 3140 3587 -4126 * 345 61 0 0 chr5 108923255 108923304 -94162228 + HERVH LTR ERV1 3841 3889 -3824 2820 156 33 44 chr5 108923479 108924139 -94161393 - HERVH LTR ERV1 -7059 654 2 1331 174 109 67 chr5 108924140 108924572 -94160960 - LTR7 LTR ERV1 0 450 1 1813 169 38 25 chr5 108924572 108924910 -94160622 - MSTA-int LTR MaLR -1280 371 26 2138 140 0 7 chr5 108924910 108925217 -94160315 - AluSx SINE Alu -7 305 1 1813 169 38 25 chr5 108925217 108925244 -94160288 - MSTA-int LTR MaLR -1625 26 1 1918 157 96 15 chr5 108925246 108925640 -94159892 - MSTA LTR MaLR -2 426 1 485 286 104 35 chr5 108925648 108925907 -94159625 + L1ME4a LINE L1 5676 5952 -169 201 74 0 0 chr5 108926443 108926470 -94159062 + (CCG)n Simple_repeat Simple_repeat 3 29 0 219 222 0 19 chr5 108926547 108926601 -94158931 + (CCG)n Simple_repeat Simple_repeat 2 54 0 765 167 7 0 chr5 108927718 108927856 -94157676 - FLAM_C SINE Alu -2 141 3 2310 114 0 3 chr5 108929884 108930191 -94155341 - AluSx SINE Alu -6 306 1 394 214 37 4 chr5 108930255 108930351 -94155181 - MER2 DNA MER2_type -139 100 4 238 358 93 67 chr5 108930956 108931300 -94154232 - L2 LINE L2 -4 3268 2916 2065 109 30 20 chr5 108931878 108932180 -94153352 + AluY SINE Alu 1 305 -6 389 253 133 25 chr5 108932795 108932953 -94152579 - MER5B DNA MER1_type -3 175 1 644 214 9 86 chr5 108933061 108933281 -94152251 + MER20 DNA MER1_type 17 219 0 1264 238 99 7 chr5 108933537 108934096 -94151436 + L1ME3 LINE L1 5534 6153 -9 739 75 28 0 chr5 108934287 108934394 -94151138 - HY1 scRNA scRNA -1 111 2 233 333 0 0 chr5 108934400 108934460 -94151072 + MIR SINE MIR 47 106 -156 1355 120 113 55 chr5 108934887 108935178 -94150354 - MER46B DNA MER2_type 0 236 54 441 185 0 43 chr5 108935179 108935271 -94150261 + FLAM_A SINE Alu 47 134 -8 252 272 320 0 chr5 108935321 108935424 -94150108 - MIR SINE MIR -108 154 19 246 180 16 16 chr5 108935568 108935629 -94149903 + MLT1K LTR MaLR 522 582 -6 439 330 105 67 chr5 108936884 108937045 -94148487 - L2 LINE L2 -14 3299 3146 559 220 0 53 chr5 108937045 108937177 -94148355 + FLAM_A SINE Alu 1 125 -8 439 330 105 67 chr5 108937177 108937461 -94148071 - L2 LINE L2 -167 3146 2837 29 0 0 0 chr5 108937473 108937502 -94148030 + AT_rich Low_complexity Low_complexity 1 29 0 687 314 90 46 chr5 108938119 108938674 -94146858 + L2 LINE L2 2625 3210 -103 241 301 91 38 chr5 108939054 108939320 -94146212 + MLT1K LTR MaLR 121 392 -223 663 165 66 8 chr5 108939507 108939628 -94145904 - FLAM_A SINE Alu -5 128 1 315 208 110 39 chr5 108939703 108939857 -94145675 + HAL1 LINE L1 2266 2430 -77 327 304 133 25 chr5 108940644 108940802 -94144730 + MER91A DNA MER1_type 19 193 -3 226 272 64 24 chr5 108940939 108941064 -94144468 - MER94 DNA DNA -2 132 3 1122 201 119 29 chr5 108941756 108942099 -94143433 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr5 108942148 108942169 -94143363 + AT_rich Low_complexity Low_complexity 1 21 0 817 279 98 20 chr5 108942230 108942588 -94142944 - HERV16 LTR ERVL -2484 2512 2127 * 1643 299 47 26 chr5 108942585 108942763 -94142769 - HERV16 LTR ERVL -2787 2209 2036 507 84 0 36 chr5 108942763 108942846 -94142686 - MADE1 DNA Mariner 0 80 1 1643 299 47 26 chr5 108942846 108943944 -94141588 - HERV16 LTR ERVL -2960 2036 843 2442 71 0 0 chr5 108944542 108944839 -94140693 - AluY SINE Alu -14 297 1 2441 213 104 73 chr5 108944972 108945808 -94139724 + MER21B LTR ERV1 1 862 -1 915 163 42 0 chr5 108945818 108945984 -94139548 - MLT1A1 LTR MaLR -15 350 178 1796 92 0 0 chr5 108945986 108946213 -94139319 - AluSq SINE Alu -14 299 73 2591 56 0 3 chr5 108946213 108946517 -94139015 - AluY SINE Alu -6 305 1 1924 116 3 3 chr5 108946517 108946811 -94138721 + L1PB1 LINE L1 5858 6151 0 1575 176 9 56 chr5 108946852 108947171 -94138361 - AluJo SINE Alu -4 308 5 2191 113 0 3 chr5 108947252 108947545 -94137987 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr5 108947685 108947707 -94137825 + AT_rich Low_complexity Low_complexity 1 22 0 347 179 43 51 chr5 108948105 108948222 -94137310 + MER112 DNA MER1_type 141 256 -4 522 236 257 0 chr5 108948229 108948369 -94137163 + MER5A DNA MER1_type 14 189 0 363 274 43 102 chr5 108948428 108948614 -94136918 + MIR SINE MIR 88 262 0 25 31 0 0 chr5 108948866 108948898 -94136634 + AT_rich Low_complexity Low_complexity 1 32 0 586 226 42 42 chr5 108949126 108949316 -94136216 + L1MB8 LINE L1 5983 6172 -6 230 291 47 55 chr5 108949409 108949536 -94135996 + L2 LINE L2 3120 3245 -68 207 323 118 0 chr5 108949613 108949706 -94135826 + MIR SINE MIR 153 256 -6 585 165 39 0 chr5 108951881 108951984 -94133548 + U6 snRNA snRNA 1 107 0 1368 138 47 44 chr5 108951984 108952339 -94133193 + L1PA16 LINE L1 5781 6166 0 706 216 107 91 chr5 108952870 108953240 -94132292 + L1MC5 LINE L1 7311 7673 -288 1762 161 0 11 chr5 108953240 108953525 -94132007 - AluJb SINE Alu -28 284 3 706 216 107 91 chr5 108953525 108953679 -94131853 + L1MC5 LINE L1 7673 7849 -112 1946 167 0 0 chr5 108953679 108953991 -94131541 + AluSx SINE Alu 1 312 0 706 216 107 91 chr5 108953991 108954073 -94131459 + L1MC5 LINE L1 7849 7928 -33 228 247 55 14 chr5 108955183 108955256 -94130276 + MIR SINE MIR 85 160 -102 22 35 0 0 chr5 108955832 108955861 -94129671 + AT_rich Low_complexity Low_complexity 1 29 0 303 295 98 72 chr5 108956200 108956393 -94129139 + MIR SINE MIR 48 245 -17 564 238 157 27 chr5 108956468 108956653 -94128879 - MER58C DNA MER1_type -3 212 4 2250 105 3 0 chr5 108956977 108957271 -94128261 - AluSp SINE Alu -18 295 1 473 236 132 11 chr5 108957431 108957613 -94127919 + L1MC5 LINE L1 7723 7926 -35 2003 123 25 3 chr5 108957625 108957909 -94127623 + AluSx SINE Alu 6 295 -17 986 158 23 12 chr5 108958075 108958246 -94127286 + AluJb SINE Alu 1 173 -139 429 153 0 0 chr5 108958246 108958318 -94127214 + AluS SINE Alu 223 294 -17 495 273 5 66 chr5 108959166 108959364 -94126168 + L2 LINE L2 3124 3309 -4 194 302 19 0 chr5 108959443 108959496 -94126036 - MIR3 SINE MIR -3 205 152 21 36 0 0 chr5 108960776 108960804 -94124728 + AT_rich Low_complexity Low_complexity 1 28 0 192 219 49 0 chr5 108962071 108962194 -94123338 + (TA)n Simple_repeat Simple_repeat 1 129 0 643 279 92 39 chr5 108962721 108963427 -94122105 + L1MC4 LINE L1 7120 7853 -189 821 192 40 23 chr5 108963748 108963925 -94121607 + MER5A DNA MER1_type 1 180 -9 6420 87 25 0 chr5 108964529 108965851 -94119681 - L1PA8 LINE L1 0 6172 4826 1202 83 12 6 chr5 108965853 108966022 -94119510 - L1PA8 LINE L1 -1458 4688 4519 651 144 0 10 chr5 108966023 108966127 -94119405 + FLAM_C SINE Alu 25 127 -16 196 337 23 0 chr5 108966326 108966412 -94119120 + MIR SINE MIR 146 233 -29 617 311 18 18 chr5 108966449 108966668 -94118864 - MIR SINE MIR -22 240 22 333 0 0 0 chr5 108966704 108966741 -94118791 + (TTA)n Simple_repeat Simple_repeat 3 39 0 38 22 0 0 chr5 108966788 108966833 -94118699 + AT_rich Low_complexity Low_complexity 1 45 0 452 126 11 23 chr5 108967165 108967252 -94118280 + MER53 DNA DNA 95 180 -9 884 145 50 50 chr5 108968973 108969194 -94116338 - L1MA7 LINE L1 -2 6289 6069 885 237 86 67 chr5 108969574 108970004 -94115528 + HAL1 LINE L1 98 535 -1972 * 1539 262 182 26 chr5 108969996 108970879 -94114653 + HAL1 LINE L1 1486 2506 -1 3293 173 5 0 chr5 108971016 108971594 -94113938 - L1PA16 LINE L1 -1 6165 5585 640 219 17 0 chr5 108971635 108971754 -94113778 + FLAM_A SINE Alu 1 121 -12 331 351 21 0 chr5 108971886 108971980 -94113552 + L2 LINE L2 3139 3234 -38 306 180 33 0 chr5 108972190 108972251 -94113281 + L1MA4A LINE L1 5898 5960 -343 313 125 0 0 chr5 108972280 108972328 -94113204 + FLAM SINE Alu 64 111 -22 462 216 9 27 chr5 108972332 108972443 -94113089 - L1PA12 LINE L1 -6823 758 650 29 0 0 0 chr5 108972519 108972548 -94112984 + AT_rich Low_complexity Low_complexity 1 29 0 8291 209 27 13 chr5 108972578 108974491 -94111041 + L1P LINE L1 931 2870 -3276 5511 122 1 48 chr5 108974469 108975423 -94110109 + L1PA11 LINE L1 5265 6173 -1 * 3693 174 17 10 chr5 108975414 108976192 -94109340 + L1MA9 LINE L1 5193 5978 -334 * 1231 126 38 17 chr5 108976209 108976447 -94109085 + L1MA9 LINE L1 6070 6312 0 2518 130 48 22 chr5 108976509 108976963 -94108569 - L1MA4 LINE L1 -7 6293 5828 894 239 65 47 chr5 108977500 108977839 -94107693 - L1ME3A LINE L1 -5 6165 5821 440 319 25 4 chr5 108977836 108978077 -94107455 - L1MDb LINE L1 -3179 3203 2958 * 531 95 253 0 chr5 108978088 108978183 -94107349 - AluY SINE Alu -16 295 177 575 282 86 11 chr5 108978184 108978648 -94106884 - L1MDb LINE L1 -3429 2953 2455 42285 37 22 3 chr5 108978657 108984693 -94100839 + L1PA3 LINE L1 1 6155 0 286 264 9 28 chr5 108984696 108984802 -94100730 - L1MDb LINE L1 -3913 2469 2366 476 279 98 64 chr5 108984825 108985183 -94100349 - L1MDb LINE L1 -4132 2431 2062 27 29 0 0 chr5 108985186 108985220 -94100312 + AT_rich Low_complexity Low_complexity 1 34 0 289 284 160 21 chr5 108985270 108985429 -94100103 - L1MDb LINE L1 -4634 1929 1737 189 0 0 0 chr5 108985429 108985450 -94100082 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 289 284 160 21 chr5 108985450 108985484 -94100048 - L1MDb LINE L1 -4826 1737 1709 257 300 90 26 chr5 108985487 108986001 -94099531 - L1MDb LINE L1 -4852 1532 1031 24 32 0 0 chr5 108986669 108986700 -94098832 + AT_rich Low_complexity Low_complexity 1 31 0 1850 112 63 4 chr5 108986897 108987166 -94098366 - AluSp SINE Alu -25 288 4 199 331 118 24 chr5 108987895 108988022 -94097510 + L3 LINE CR1 1435 1573 -4 786 221 25 72 chr5 108988156 108988391 -94097141 - MER58A DNA MER1_type 0 224 1 1100 291 108 28 chr5 108988627 108989129 -94096403 + MER77 LTR ERV1 58 599 -6 768 328 81 33 chr5 108989540 108990058 -94095474 + L3 LINE CR1 934 1476 -101 293 330 20 0 chr5 108990069 108990169 -94095363 - L2 LINE L2 0 3313 3212 681 318 100 55 chr5 108990310 108990936 -94094596 + L2 LINE L2 2653 3313 0 197 250 125 0 chr5 108990936 108990992 -94094540 + L3 LINE CR1 1496 1558 -19 326 133 133 13 chr5 108991309 108991384 -94094148 - Charlie5 DNA MER1_type -27 2585 2502 369 207 0 0 chr5 108991477 108991559 -94093973 + (TA)n Simple_repeat Simple_repeat 1 82 0 526 132 16 47 chr5 108991606 108991735 -94093797 - Charlie5 DNA MER1_type -94 2518 2394 * 747 170 14 7 chr5 108991733 108991880 -94093652 - Charlie5 DNA MER1_type -2447 165 18 2386 116 8 8 chr5 108992157 108992512 -94093020 - THE1A LTR MaLR 0 355 1 221 154 0 0 chr5 108992759 108992800 -94092732 + (CATA)n Simple_repeat Simple_repeat 1 41 0 1872 174 3 0 chr5 108993007 108993311 -94092221 + AluJb SINE Alu 1 305 -7 21 0 0 0 chr5 108993362 108993383 -94092149 + AT_rich Low_complexity Low_complexity 1 21 0 339 195 288 8 chr5 108993398 108993516 -94092016 - MIR SINE MIR 0 262 112 1379 222 5 64 chr5 108993629 108994017 -94091515 + MLT1A1 LTR MaLR 1 365 0 228 306 88 5 chr5 108995819 108995953 -94089579 - MIR SINE MIR -62 146 3 202 316 43 43 chr5 108996161 108996300 -94089232 - L3 LINE CR1 -1111 466 328 21 82 0 0 chr5 108997317 108997366 -94088166 + AT_rich Low_complexity Low_complexity 1 49 0 688 250 67 33 chr5 108998136 108998376 -94087156 - MIR SINE MIR -8 254 7 937 217 16 0 chr5 108998394 108998578 -94086954 - MER5A DNA MER1_type 0 189 3 331 350 0 17 chr5 108999995 109000112 -94085420 - MIR3 SINE MIR -93 115 1 270 0 0 0 chr5 109000866 109000896 -94084636 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2363 95 0 3 chr5 109000984 109001290 -94084242 - AluSg SINE Alu -5 305 1 252 0 0 0 chr5 109002541 109002569 -94082963 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 2204 63 3 0 chr5 109003790 109004075 -94081457 - L1PA7 LINE L1 0 6154 5869 4590 71 23 6 chr5 109004075 109004900 -94080632 + L1PA7 LINE L1 5059 5892 -262 322 260 171 25 chr5 109006854 109007135 -94078397 - L1ME4a LINE L1 -260 5861 5540 24 53 0 0 chr5 109007235 109007273 -94078259 + AT_rich Low_complexity Low_complexity 1 38 0 207 0 0 0 chr5 109009848 109009871 -94075661 + (A)n Simple_repeat Simple_repeat 1 23 0 2374 178 60 2 chr5 109010625 109011104 -94074428 - L1PB4 LINE L1 0 6156 5650 635 220 13 13 chr5 109012125 109012275 -94073257 - L1PB4 LINE L1 -79 6077 5928 244 310 105 7 chr5 109012356 109012460 -94073072 - MIR SINE MIR -68 140 37 263 246 92 0 chr5 109012556 109012621 -94072911 - L2 LINE L2 -2 3270 3200 184 275 55 46 chr5 109013421 109013530 -94072002 + MIR SINE MIR 124 233 -29 682 213 0 0 chr5 109014243 109014365 -94071167 + FLAM_A SINE Alu 1 122 -11 21 0 0 0 chr5 109014367 109014388 -94071144 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 109014757 109014780 -94070752 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 109016290 109016314 -94069218 + AT_rich Low_complexity Low_complexity 1 24 0 214 267 100 0 chr5 109016314 109016366 -94069166 - L2 LINE L2 -12 3260 3203 246 298 94 24 chr5 109016366 109016542 -94068990 + MER5B DNA MER1_type 1 184 -5 564 183 9 17 chr5 109016770 109016885 -94068647 + MLT1I LTR MaLR 293 406 -3 193 262 33 0 chr5 109017025 109017086 -94068446 - MIR SINE MIR -2 260 198 * 611 321 16 64 chr5 109017080 109017367 -94068165 - L2 LINE L2 -323 2990 2719 4807 198 43 19 chr5 109018295 109019350 -94066182 + Tigger6a DNA MER2_type 2 1081 -2 296 258 90 18 chr5 109019824 109019991 -94065541 + L1ME4a LINE L1 5931 6109 -12 446 286 84 0 chr5 109020563 109020717 -94064815 - MIR SINE MIR -14 248 82 277 261 0 15 chr5 109021681 109021746 -94063786 - MIR SINE MIR 0 262 199 2248 154 8 6 chr5 109022145 109022508 -94063024 + THE1B LTR MaLR 1 364 0 7371 38 1 1 chr5 109022517 109023987 -94061545 + L1PA4 LINE L1 4684 6154 -1 414 275 147 44 chr5 109024164 109024437 -94061095 + L1ME4a LINE L1 5818 6118 -3 464 265 116 17 chr5 109024907 109025088 -94060444 + L1MB8 LINE L1 5980 6178 0 794 207 53 6 chr5 109025204 109025373 -94060159 - MER45A DNA AcHobo -1 177 1 979 283 79 50 chr5 109026052 109026695 -94058837 - L1M4 LINE L1 -936 5210 4549 * 7152 43 1 0 chr5 109026693 109027557 -94057975 + L1PA5 LINE L1 5288 6152 -2 601 249 28 17 chr5 109027671 109027852 -94057680 - L1M4 LINE L1 -1894 4252 4070 386 196 29 0 chr5 109027879 109027962 -94057570 - L1ME LINE L1 -568 5602 5518 431 331 29 17 chr5 109029258 109029433 -94056099 + MIR3 SINE MIR 19 195 -13 498 299 82 26 chr5 109029881 109030075 -94055457 - L2 LINE L2 -1 3312 3108 193 266 310 6 chr5 109030149 109030307 -94055225 - L2 LINE L2 -339 2975 2770 2534 153 19 16 chr5 109030392 109030817 -94054715 + MSTB LTR MaLR 1 426 0 638 292 83 51 chr5 109031544 109031766 -94053766 + L1MC4 LINE L1 7140 7354 -688 2435 116 25 0 chr5 109031766 109032120 -94053412 + THE1B LTR MaLR 2 364 0 10359 106 47 7 chr5 109032120 109033639 -94051893 + THE1B-int LTR MaLR 1 1580 0 2168 148 34 0 chr5 109033639 109033991 -94051541 + THE1B LTR MaLR 1 364 0 638 292 83 51 chr5 109033991 109034177 -94051355 + L1MC4 LINE L1 7353 7563 -479 3249 160 28 15 chr5 109034186 109035178 -94050354 + L1PB4 LINE L1 4788 5791 -365 319 224 10 10 chr5 109035178 109035276 -94050256 + (TA)n Simple_repeat Simple_repeat 1 98 0 207 69 0 0 chr5 109035305 109035334 -94050198 + (CA)n Simple_repeat Simple_repeat 2 30 0 46 19 0 0 chr5 109035347 109035400 -94050132 + AT_rich Low_complexity Low_complexity 1 53 0 2238 134 14 0 chr5 109035460 109035817 -94049715 + L1PB4 LINE L1 5792 6153 -3 871 239 35 75 chr5 109035886 109036224 -94049308 + L1MC4 LINE L1 7608 7925 -117 182 37 37 0 chr5 109036224 109036251 -94049281 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 871 239 35 75 chr5 109036251 109036363 -94049169 + L1MC4 LINE L1 7925 8040 -2 1765 189 0 13 chr5 109038370 109038671 -94046861 + AluJo SINE Alu 1 297 -15 313 307 139 0 chr5 109038962 109039099 -94046433 - MIR SINE MIR 0 262 107 194 267 0 0 chr5 109039706 109039751 -94045781 + L2 LINE L2 3267 3311 -2 294 282 0 0 chr5 109039981 109040052 -94045480 - MIR SINE MIR -8 254 184 396 348 38 27 chr5 109040277 109040461 -94045071 - MIR SINE MIR -54 208 23 2128 72 4 0 chr5 109041233 109041509 -94044023 + L1PA8 LINE L1 5887 6163 -9 24 0 0 0 chr5 109041509 109041533 -94043999 + AT_rich Low_complexity Low_complexity 1 24 0 181 327 0 0 chr5 109042402 109042454 -94043078 - L2 LINE L2 -8 3264 3213 2142 100 30 7 chr5 109043259 109043560 -94041972 + AluSq SINE Alu 1 308 -5 180 0 0 0 chr5 109043923 109043943 -94041589 + (A)n Simple_repeat Simple_repeat 1 20 0 479 253 142 11 chr5 109044249 109044439 -94041093 - MIR SINE MIR 0 262 48 666 301 49 53 chr5 109044440 109044872 -94040660 - MLT1K LTR MaLR 0 588 159 22 0 0 0 chr5 109047517 109047539 -94037993 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 109048414 109048441 -94037091 + AT_rich Low_complexity Low_complexity 1 27 0 1117 181 5 5 chr5 109048442 109048652 -94036880 - L1MB2 LINE L1 -3 6168 5959 1442 167 32 16 chr5 109048652 109048956 -94036576 - L1MA4 LINE L1 -2 6298 5982 191 0 103 0 chr5 109048999 109049028 -94036504 + A-rich Low_complexity Low_complexity 2 33 0 413 332 75 70 chr5 109049103 109049197 -94036335 - L2 LINE L2 -1 3312 3220 2429 72 7 3 chr5 109049197 109049503 -94036029 + AluY SINE Alu 1 307 -4 413 332 75 70 chr5 109049503 109049981 -94035551 - L2 LINE L2 -93 3220 2727 2010 116 10 7 chr5 109050211 109050514 -94035018 - AluSx SINE Alu -8 304 1 435 276 89 8 chr5 109050637 109050760 -94034772 + L2 LINE L2 3122 3254 -18 2056 132 32 106 chr5 109051142 109051635 -94033897 + L1MA6 LINE L1 5844 6300 0 256 98 39 20 chr5 109053191 109053242 -94032290 - L1MC4 LINE L1 -2 8040 7989 1116 290 60 16 chr5 109053252 109053687 -94031845 - L1MC4 LINE L1 -143 7899 7446 2008 236 84 24 chr5 109053689 109054368 -94031164 - L1MC4 LINE L1 -720 7322 6444 205 188 31 31 chr5 109056400 109056464 -94029068 + (TATG)n Simple_repeat Simple_repeat 3 66 0 1835 149 33 3 chr5 109057085 109057386 -94028146 + AluSx SINE Alu 1 310 -2 258 331 89 12 chr5 109057894 109058063 -94027469 + LTR16C LTR ERVL 308 489 -2 557 293 12 59 chr5 109058092 109058345 -94027187 + L1M4 LINE L1 2929 3169 -2977 1609 199 0 19 chr5 109058345 109058457 -94027075 + AluJo SINE Alu 1 114 -198 1733 121 127 27 chr5 109058457 109058788 -94026744 - THE1B LTR MaLR 0 364 1 1609 199 0 19 chr5 109058788 109058987 -94026545 + AluJo SINE Alu 114 306 -6 8102 154 32 21 chr5 109058992 109059715 -94025817 + L1MA5 LINE L1 3787 4501 -1799 1951 120 102 0 chr5 109059715 109059998 -94025534 + AluSx SINE Alu 1 312 0 8102 154 32 21 chr5 109059998 109061761 -94023771 + L1MA5 LINE L1 4501 6300 0 1108 234 70 55 chr5 109061778 109062163 -94023369 + L1ME1 LINE L1 5718 6108 -58 325 295 33 0 chr5 109062234 109062356 -94023176 + MIR SINE MIR 136 261 -1 21 0 0 0 chr5 109062633 109062654 -94022878 + AT_rich Low_complexity Low_complexity 1 21 0 268 231 45 128 chr5 109064806 109064962 -94020570 + MIR SINE MIR 119 261 -1 665 123 19 0 chr5 109065205 109065311 -94020221 + AluY SINE Alu 191 298 -13 306 293 134 55 chr5 109065389 109065553 -94019979 + L2 LINE L2 3096 3272 0 24 53 0 0 chr5 109065622 109065660 -94019872 + AT_rich Low_complexity Low_complexity 1 38 0 202 150 0 25 chr5 109068327 109068367 -94017165 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 541 97 0 0 chr5 109068449 109068560 -94016972 + AluY SINE Alu 211 321 0 1072 151 0 0 chr5 109071037 109071223 -94014309 + MER53 DNA DNA 4 189 0 904 233 0 28 chr5 109072260 109072475 -94013057 - MER3 DNA MER1_type 0 209 1 549 278 30 0 chr5 109072753 109072886 -94012646 + MIR SINE MIR 28 164 -98 319 229 16 0 chr5 109072910 109072971 -94012561 - MER91B DNA MER1_type -127 63 2 291 250 12 12 chr5 109072983 109073067 -94012465 + MIR SINE MIR 175 258 -4 236 315 55 0 chr5 109073143 109073216 -94012316 + MER81 DNA DNA 4 80 -34 270 136 0 0 chr5 109073583 109073627 -94011905 + (T)n Simple_repeat Simple_repeat 1 44 0 1335 203 74 30 chr5 109074255 109074433 -94011099 - AluJo SINE Alu -3 309 111 270 0 0 0 chr5 109074433 109074463 -94011069 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1335 203 74 30 chr5 109074463 109074580 -94010952 - AluJo SINE Alu -201 111 1 200 333 131 0 chr5 109075564 109075663 -94009869 + MIR SINE MIR 37 148 -60 258 295 0 0 chr5 109076635 109076696 -94008836 - L2 LINE L2 -1 3271 3211 1378 247 133 18 chr5 109076890 109077012 -94008520 + L1MC4a LINE L1 6443 6550 -1258 473 47 16 0 chr5 109077012 109077076 -94008456 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 1378 247 133 18 chr5 109077076 109077500 -94008032 + L1MC4a LINE L1 6550 7052 -756 2408 205 83 18 chr5 109078151 109078804 -94006728 + L1MC4 LINE L1 7143 7837 -205 831 48 0 0 chr5 109081456 109081559 -94003973 + L1PA4 LINE L1 6042 6144 -11 21 0 0 0 chr5 109081559 109081580 -94003952 + AT_rich Low_complexity Low_complexity 1 21 0 228 222 0 0 chr5 109081973 109082045 -94003487 + (CA)n Simple_repeat Simple_repeat 1 72 0 1952 135 14 3 chr5 109082338 109082635 -94002897 + AluSx SINE Alu 3 302 -10 388 348 219 21 chr5 109083150 109083524 -94002008 - L2 LINE L2 0 3272 2825 1470 181 0 76 chr5 109083931 109084246 -94001286 + AluJo SINE Alu 13 303 -9 340 238 123 25 chr5 109084948 109085070 -94000462 + MIR SINE MIR 36 169 -93 976 379 37 29 chr5 109085386 109086304 -93999228 + ERVL LTR ERVL 4335 5259 -505 592 39 13 0 chr5 109086317 109086394 -93999138 - MLT1A2 LTR MaLR -15 413 336 689 225 97 66 chr5 109086516 109086805 -93998727 - MLT1A2 LTR MaLR -76 298 1 272 298 39 44 chr5 109087390 109087571 -93997961 + LTR16C LTR ERVL 289 468 -23 189 0 0 0 chr5 109089526 109089547 -93995985 + (A)n Simple_repeat Simple_repeat 1 21 0 985 283 24 0 chr5 109090195 109090442 -93995090 + MIR SINE MIR 10 262 0 1819 63 30 0 chr5 109090735 109090972 -93994560 - L1PA5 LINE L1 0 6154 5911 253 299 55 8 chr5 109090999 109091126 -93994406 - L1ME LINE L1 -472 5649 5517 1610 203 14 0 chr5 109091797 109092093 -93993439 + AluJo SINE Alu 1 300 -12 412 246 266 44 chr5 109092214 109092462 -93993070 - L2 LINE L2 0 3313 3011 7401 236 69 53 chr5 109092469 109092632 -93992900 + L1MA2 LINE L1 6 165 -7400 2551 61 0 0 chr5 109092632 109092942 -93992590 - AluY SINE Alu -1 310 1 7401 236 69 53 chr5 109092942 109093007 -93992525 + L1MA2 LINE L1 165 228 -7337 2335 91 0 7 chr5 109093007 109093304 -93992228 - AluSq SINE Alu -16 297 3 7401 236 69 53 chr5 109093304 109094725 -93990807 + L1MA2 LINE L1 228 988 -6577 1827 131 6 56 chr5 109094725 109095045 -93990487 + AluSg SINE Alu 1 304 -6 7401 236 69 53 chr5 109095045 109096180 -93989352 + L1MA2 LINE L1 988 2104 -5461 2198 266 39 19 chr5 109096180 109097139 -93988393 + L1P3 LINE L1 5 1048 -4827 5447 123 10 11 chr5 109097146 109098286 -93987246 + L1P4 LINE L1 4465 5604 -564 * 5496 180 47 15 chr5 109098279 109100272 -93985260 + L1MA2 LINE L1 2868 4925 -2640 21643 134 10 25 chr5 109100272 109106781 -93978751 + L1PA8A LINE L1 3 6446 0 8961 168 16 18 chr5 109106776 109109413 -93976119 + L1MA2 LINE L1 4914 7538 -185 * 337 150 0 80 chr5 109109537 109109637 -93975895 + L1MA2 LINE L1 6066 6157 -147 1589 82 51 0 chr5 109109637 109109887 -93975645 + L1MA2 LINE L1 6035 6303 -1 240 191 0 0 chr5 109110241 109110283 -93975249 - L2 LINE L2 -4 3309 3268 263 343 0 0 chr5 109110479 109110581 -93974951 + LTR48B LTR ERV1 1 102 -542 * 880 227 47 114 chr5 109110559 109111031 -93974501 + MER39 LTR ERV1 265 704 -3 23 0 0 0 chr5 109113637 109113660 -93971872 + AT_rich Low_complexity Low_complexity 1 23 0 21023 102 6 45 chr5 109113897 109117335 -93968197 + L1PA7 LINE L1 2098 5401 -745 2758 34 0 0 chr5 109117335 109117658 -93967874 + L1PA5 LINE L1 5828 6154 0 6040 65 0 0 chr5 109117661 109118430 -93967102 + L1PA7 LINE L1 5385 6153 -1 568 160 27 96 chr5 109118814 109118941 -93966591 + L1M2 LINE L1 2864 2975 -3171 606 180 57 0 chr5 109118941 109119031 -93966501 + L1MA3 LINE L1 6175 6275 -30 503 42 0 14 chr5 109119031 109119102 -93966430 + (TA)n Simple_repeat Simple_repeat 2 71 0 606 180 57 0 chr5 109119102 109119133 -93966399 + L1MA3 LINE L1 6275 6303 -2 568 160 27 96 chr5 109119133 109119193 -93966339 + L1M2 LINE L1 2975 3038 -3108 1673 144 0 15 chr5 109119194 109119457 -93966075 + AluSp SINE Alu 1 259 -54 347 65 39 52 chr5 109119485 109119562 -93965970 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 5857 196 51 29 chr5 109119562 109121083 -93964449 + L1M2 LINE L1 3031 4708 -1583 1412 208 63 0 chr5 109121083 109121367 -93964165 + AluJo SINE Alu 1 302 -10 5857 196 51 29 chr5 109121367 109122432 -93963100 + L1M2 LINE L1 4708 5748 -543 333 217 17 9 chr5 109122432 109122547 -93962985 + (TG)n Simple_repeat Simple_repeat 2 117 0 747 166 7 7 chr5 109122597 109122736 -93962796 - L1MB1 LINE L1 -274 5915 5777 19899 177 22 56 chr5 109122861 109126414 -93959118 - L1PA12 LINE L1 -193 7413 3305 2443 93 3 0 chr5 109126414 109126724 -93958808 - AluSp SINE Alu -2 311 1 19899 177 22 56 chr5 109126724 109128892 -93956640 - L1PA12 LINE L1 -4301 3305 1065 1857 218 54 33 chr5 109128894 109129414 -93956118 + MLT2A2 LTR ERVL 3 554 0 4722 153 27 22 chr5 109129414 109130197 -93955335 - L1PA12 LINE L1 -6788 793 7 2046 107 10 33 chr5 109132128 109132428 -93953104 - AluSc SINE Alu -11 298 6 1181 147 10 0 chr5 109132583 109132780 -93952752 + L1PBa LINE L1 1 199 -6664 * 10648 149 50 17 chr5 109132774 109136561 -93948971 + L1PBa LINE L1 626 4682 -2180 7034 54 3 10 chr5 109136569 109137500 -93948032 + L1PA5 LINE L1 5229 6154 0 444 225 225 38 chr5 109137608 109138061 -93947471 + L1M4 LINE L1 2118 2655 -3491 248 351 6 23 chr5 109138087 109138258 -93947274 + L1MEc LINE L1 1540 1707 -4689 21 0 0 0 chr5 109138503 109138524 -93947008 + AT_rich Low_complexity Low_complexity 1 21 0 290 282 47 24 chr5 109138695 109138965 -93946567 + L1MEc LINE L1 2288 2564 -3651 22 0 0 0 chr5 109139961 109139983 -93945549 + AT_rich Low_complexity Low_complexity 1 22 0 310 336 37 0 chr5 109140113 109140220 -93945312 + L2 LINE L2 3155 3265 -7 24841 161 11 25 chr5 109140299 109145646 -93939886 + L1PA10 LINE L1 10 5410 -1073 2243 114 3 0 chr5 109145646 109145943 -93939589 + AluSx SINE Alu 5 302 -10 24841 161 11 25 chr5 109145943 109146993 -93938539 + L1PA10 LINE L1 5410 6472 -11 255 31 0 0 chr5 109146995 109147027 -93938505 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 319 340 198 5 chr5 109147067 109147264 -93938268 + MLT1K LTR MaLR 12 246 -342 295 328 48 32 chr5 109147743 109147868 -93937664 + L2 LINE L2 3121 3247 -25 356 311 187 5 chr5 109147882 109148101 -93937431 + MIR SINE MIR 1 259 -3 1393 137 88 117 chr5 109148608 109148679 -93936853 - THE1C LTR MaLR 0 375 304 1845 153 25 0 chr5 109148679 109148960 -93936572 + AluSx SINE Alu 1 288 -24 1393 137 88 117 chr5 109148960 109149274 -93936258 - THE1C LTR MaLR -71 304 1 437 331 96 27 chr5 109149935 109150228 -93935304 - L3 LINE CR1 -51 1526 1214 597 323 114 42 chr5 109150236 109150710 -93934822 - L2 LINE L2 -2 3311 2804 2728 78 92 5 chr5 109150741 109151153 -93934379 - LTR7 LTR ERV1 -2 448 1 201 388 19 25 chr5 109151275 109151435 -93934097 - L3 LINE CR1 -439 1138 980 606 239 113 6 chr5 109151523 109151682 -93933850 + MER5B DNA MER1_type 1 176 -2 539 290 155 0 chr5 109151703 109151858 -93933674 - MER5A DNA MER1_type -2 187 9 961 132 35 96 chr5 109151879 109152076 -93933456 - MER5A DNA MER1_type -4 185 1 307 314 106 58 chr5 109154012 109154286 -93931246 + L3 LINE CR1 540 826 -751 2529 62 0 0 chr5 109154602 109154906 -93930626 + AluY SINE Alu 1 304 -7 318 283 52 99 chr5 109154983 109155036 -93930496 + MIR SINE MIR 3 57 -205 2242 110 21 43 chr5 109155036 109155408 -93930124 + THE1B LTR MaLR 1 364 0 318 283 52 99 chr5 109155408 109155566 -93929966 + MIR SINE MIR 57 204 -58 233 257 43 14 chr5 109156628 109156698 -93928834 + L2 LINE L2 2301 2372 -942 245 88 0 0 chr5 109156698 109156732 -93928800 + MER92B LTR ERV1 1 34 -602 363 150 0 0 chr5 109156951 109157011 -93928521 + MER92C LTR ERV1 491 550 -4 1715 151 42 45 chr5 109157054 109157365 -93928167 - AluJb SINE Alu 0 312 3 1810 285 50 26 chr5 109157365 109158256 -93927276 + L2 LINE L2 2414 3311 -2 4684 191 32 9 chr5 109159081 109160501 -93925031 - L1MB1 LINE L1 0 6168 4717 205 309 119 0 chr5 109160537 109160621 -93924911 + MIR SINE MIR 91 184 -78 25 31 0 0 chr5 109160655 109160687 -93924845 + AT_rich Low_complexity Low_complexity 1 32 0 324 303 189 30 chr5 109160822 109161058 -93924474 + L2 LINE L2 2889 3086 -227 2236 117 7 0 chr5 109161058 109161365 -93924167 - AluSx SINE Alu -3 309 1 324 303 189 30 chr5 109161365 109161494 -93924038 + L2 LINE L2 3086 3312 -1 378 0 0 0 chr5 109162773 109162815 -93922717 + (TG)n Simple_repeat Simple_repeat 2 43 0 289 239 124 18 chr5 109162923 109163036 -93922496 + L2 LINE L2 3188 3312 -1 718 198 0 0 chr5 109163670 109163786 -93921746 - FLAM_A SINE Alu -13 129 14 2272 103 10 3 chr5 109164321 109164631 -93920901 + AluSq SINE Alu 1 312 -1 1274 136 23 0 chr5 109164816 109165030 -93920502 + L1MA8 LINE L1 6067 6285 -6 1635 187 4 0 chr5 109165041 109165319 -93920213 - AluJo SINE Alu -23 289 11 586 91 0 124 chr5 109168887 109169008 -93916524 + MER50 LTR ERV1 499 604 -130 328 242 206 86 chr5 109172018 109172357 -93913175 + L1M2 LINE L1 541 920 -5929 22 0 0 0 chr5 109172694 109172716 -93912816 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 109174563 109174587 -93910945 + AT_rich Low_complexity Low_complexity 1 24 0 2492 72 3 0 chr5 109175007 109175314 -93910218 + AluSp SINE Alu 1 308 -5 225 297 22 77 chr5 109175743 109175834 -93909698 + MIR SINE MIR 58 143 -119 28 0 0 0 chr5 109176256 109176284 -93909248 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 109176520 109176545 -93908987 + AT_rich Low_complexity Low_complexity 1 25 0 233 351 0 26 chr5 109176582 109176696 -93908836 - MIR3 SINE MIR -9 199 89 21 0 0 0 chr5 109177468 109177489 -93908043 + AT_rich Low_complexity Low_complexity 1 21 0 1460 171 3 115 chr5 109190652 109190992 -93894540 + AluJo SINE Alu 1 302 0 21 71 0 0 chr5 109191974 109192016 -93893516 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr5 109192223 109192250 -93893282 + AT_rich Low_complexity Low_complexity 1 27 0 286 109 43 0 chr5 109192634 109192680 -93892852 - MER116 DNA Mariner 0 80 33 1890 145 43 23 chr5 109195262 109195566 -93889966 - AluJb SINE Alu -2 310 1 2084 113 20 7 chr5 109196279 109196571 -93888961 + AluSx SINE Alu 1 296 -16 473 284 81 51 chr5 109197625 109197861 -93887671 + MIR SINE MIR 2 244 -18 22 0 0 30 chr5 109198913 109198932 -93886600 + AT_rich Low_complexity Low_complexity 1 20 -12 2376 92 0 0 chr5 109198932 109199238 -93886294 - AluSc SINE Alu -3 306 1 22 0 0 30 chr5 109199238 109199251 -93886281 + AT_rich Low_complexity Low_complexity 20 32 0 186 250 105 26 chr5 109199997 109200073 -93885459 + MIR SINE MIR 174 255 -7 974 284 60 54 chr5 109200109 109200645 -93884887 + L2 LINE L2 2245 2783 -531 1615 234 81 26 chr5 109200648 109201152 -93884380 + L1MC4 LINE L1 7508 8039 -3 475 247 307 20 chr5 109201207 109201503 -93884029 + L2 LINE L2 2855 3235 -78 282 160 0 0 chr5 109201544 109201594 -93883938 + GA-rich Low_complexity Low_complexity 3 52 0 216 182 45 0 chr5 109201837 109201881 -93883651 - L2 LINE L2 -16 3297 3252 298 300 54 54 chr5 109201901 109202031 -93883501 - MIR SINE MIR -76 132 3 317 360 44 0 chr5 109202627 109202741 -93882791 - L2 LINE L2 -4 3268 3150 333 264 74 8 chr5 109202907 109203028 -93882504 - MLT1F LTR MaLR -108 434 306 12457 156 56 30 chr5 109203398 109203761 -93881771 + L1MA5A LINE L1 2488 2840 -3457 1573 159 93 14 chr5 109203761 109204050 -93881482 + AluJo SINE Alu 1 312 0 12457 156 56 30 chr5 109204050 109205495 -93880037 + L1MA5A LINE L1 2840 4246 -2051 2340 105 3 0 chr5 109205495 109205800 -93879732 + AluSp SINE Alu 1 306 -7 12457 156 56 30 chr5 109205800 109207549 -93877983 + L1MA5A LINE L1 4246 6148 -149 1379 183 52 42 chr5 109207549 109207855 -93877677 + AluJo SINE Alu 1 309 -3 12457 156 56 30 chr5 109207855 109207915 -93877617 + L1MA5A LINE L1 6148 6205 -92 296 175 16 0 chr5 109207953 109208016 -93877516 + (TATG)n Simple_repeat Simple_repeat 4 67 0 1801 156 3 7 chr5 109208019 109208302 -93877230 - AluJo SINE Alu -30 282 1 24 32 0 0 chr5 109208302 109208333 -93877199 + AT_rich Low_complexity Low_complexity 1 31 0 1005 192 0 0 chr5 109209172 109209339 -93876193 - FRAM SINE Alu -6 170 4 755 200 5 62 chr5 109209347 109209542 -93875990 - AluJo SINE Alu -120 192 9 991 218 122 55 chr5 109210503 109210774 -93874758 - AluJb SINE Alu -13 289 1 464 231 128 0 chr5 109211270 109211387 -93874145 - MIR SINE MIR -26 236 105 1688 179 0 3 chr5 109211440 109211725 -93873807 + AluJb SINE Alu 1 284 -28 180 0 0 0 chr5 109211728 109211748 -93873784 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 345 209 152 37 chr5 109211790 109211929 -93873603 + HAL1 LINE L1 2284 2452 -55 369 0 0 0 chr5 109211929 109211970 -93873562 + (TG)n Simple_repeat Simple_repeat 2 42 0 345 209 152 37 chr5 109211970 109212021 -93873511 + HAL1 LINE L1 2452 2496 -11 1874 56 0 0 chr5 109212690 109212922 -93872610 + SVA Other Other 1149 1380 -6 485 270 67 62 chr5 109213512 109213930 -93871602 + L1M4 LINE L1 4737 5156 -990 381 228 43 84 chr5 109214235 109214352 -93871180 + L1MDa LINE L1 1455 1570 -4960 1928 72 247 0 chr5 109214352 109214644 -93870888 + THE1B LTR MaLR 1 364 0 381 228 43 84 chr5 109214644 109214721 -93870811 + L1MDa LINE L1 1570 1649 -4881 13524 185 32 26 chr5 109214890 109215767 -93869765 + L1PB1 LINE L1 1029 1899 -4968 239 59 29 0 chr5 109215767 109215801 -93869731 - MADE1 DNA Mariner -45 35 1 13524 185 32 26 chr5 109215801 109219904 -93865628 + L1PB1 LINE L1 1899 6100 -767 2859 7 0 0 chr5 109219904 109220212 -93865320 + AluY SINE Alu 1 308 -3 13524 185 32 26 chr5 109220212 109220985 -93864547 + L1PB1 LINE L1 6100 6867 0 248 94 0 0 chr5 109221314 109221346 -93864186 - MLT1A2 LTR MaLR 0 374 343 1287 232 55 15 chr5 109221666 109221994 -93863538 + MER58B DNA MER1_type 1 341 0 1654 138 13 69 chr5 109222715 109223020 -93862512 - AluJo SINE Alu -20 292 5 2250 267 56 38 chr5 109223312 109223900 -93861632 + HAL1 LINE L1 1562 2175 -332 1646 188 14 0 chr5 109223900 109224187 -93861345 - AluJb SINE Alu -18 294 4 2250 267 56 38 chr5 109224187 109224527 -93861005 + HAL1 LINE L1 2175 2507 0 240 130 0 0 chr5 109224609 109224655 -93860877 + (TA)n Simple_repeat Simple_repeat 1 46 0 650 202 36 73 chr5 109224788 109224887 -93860645 + Charlie2 DNA MER1_type 2605 2706 -156 3310 89 16 7 chr5 109224887 109225334 -93860198 - MLT2A2 LTR ERVL -2 451 1 650 202 36 73 chr5 109225334 109225482 -93860050 + Charlie2 DNA MER1_type 2706 2843 -19 258 292 80 51 chr5 109226014 109226151 -93859381 + MIR SINE MIR 3 143 -119 10470 195 15 7 chr5 109226169 109229068 -93856464 + L1PA13 LINE L1 1183 4113 -2684 2028 65 0 14 chr5 109229068 109229338 -93856194 + L1PA13 LINE L1 5890 6162 -1 2104 74 78 0 chr5 109229371 109229654 -93855878 + AluY SINE Alu 1 305 -6 211 260 18 142 chr5 109230127 109230296 -93855236 + L2 LINE L2 1633 1780 -1534 743 180 0 8 chr5 109230299 109230427 -93855105 + FLAM_C SINE Alu 1 127 -16 452 313 47 33 chr5 109230465 109230676 -93854856 + L2 LINE L2 1773 1986 -1328 467 223 107 8 chr5 109230810 109230931 -93854601 + FLAM_C SINE Alu 1 133 -10 2312 64 0 14 chr5 109230952 109231247 -93854285 + AluY SINE Alu 1 291 -20 27 87 0 0 chr5 109231254 109231323 -93854209 + AT_rich Low_complexity Low_complexity 1 69 0 731 202 0 0 chr5 109231419 109231548 -93853984 + FLAM_C SINE Alu 1 129 -4 374 337 50 0 chr5 109232680 109232861 -93852671 - L2 LINE L2 -976 2338 2149 2462 132 3 3 chr5 109232863 109233227 -93852305 - THE1B LTR MaLR 0 364 1 280 284 68 14 chr5 109233358 109233506 -93852026 + MLT1L LTR MaLR 37 192 -423 211 146 36 0 chr5 109233507 109233562 -93851970 + (TA)n Simple_repeat Simple_repeat 2 58 0 441 0 0 0 chr5 109233579 109233628 -93851904 + (CA)n Simple_repeat Simple_repeat 2 50 0 254 276 0 0 chr5 109233632 109233690 -93851842 + MLT1L LTR MaLR 217 274 -341 452 254 224 5 chr5 109233733 109233934 -93851598 + MLT1L LTR MaLR 357 601 -14 188 254 18 0 chr5 109233964 109234019 -93851513 - L2 LINE L2 -1320 1994 1939 1769 234 41 26 chr5 109234161 109234201 -93851331 - MLT2F LTR ERVL -18 645 607 432 0 0 0 chr5 109234201 109234249 -93851283 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 1769 234 41 26 chr5 109234249 109234794 -93850738 - MLT2F LTR ERVL -56 607 3 246 316 94 17 chr5 109235389 109235506 -93850026 + MIR3 SINE MIR 70 195 -13 1716 118 103 11 chr5 109235772 109236035 -93849497 - AluSq SINE Alu -26 287 1 411 251 44 134 chr5 109236249 109236727 -93848805 + L1MC/D LINE L1 5285 5719 -2089 2385 95 0 0 chr5 109236962 109237268 -93848264 + AluSx SINE Alu 1 306 -6 427 259 179 23 chr5 109237390 109237653 -93847879 + HAL1b LINE L1 279 582 -766 27 62 0 0 chr5 109237822 109237870 -93847662 + GC_rich Low_complexity Low_complexity 1 48 0 589 151 109 0 chr5 109237938 109238057 -93847475 - MER61C LTR ERV1 -198 236 105 3555 130 16 14 chr5 109238082 109238867 -93846665 - MER61C-int LTR ERV1 0 6934 3504 1078 53 0 0 chr5 109238867 109238998 -93846534 - AluSp/q SINE Alu -2 311 181 9038 138 54 72 chr5 109239005 109240990 -93844542 - MER61C-int LTR ERV1 -391 4826 2807 2438 75 0 0 chr5 109240990 109241283 -93844249 - AluY SINE Alu -18 293 1 9038 138 54 72 chr5 109241283 109241495 -93844037 - MER61C-int LTR ERV1 -2410 2807 2593 2159 100 28 0 chr5 109241495 109241784 -93843748 + AluSx SINE Alu 1 297 -15 9038 138 54 72 chr5 109241784 109243804 -93841728 - MER61C-int LTR ERV1 -2624 2593 375 2179 100 7 7 chr5 109243804 109244095 -93841437 - AluSq SINE Alu -22 291 1 9038 138 54 72 chr5 109244095 109244225 -93841307 - MER61C-int LTR ERV1 -4842 375 244 266 203 40 14 chr5 109244416 109244490 -93841042 - MER61C-int LTR ERV1 -6609 482 407 440 237 22 79 chr5 109244511 109244650 -93840882 - MER61C-int LTR ERV1 -5068 149 19 1755 130 102 12 chr5 109244666 109244988 -93840544 - MER61C LTR ERV1 0 434 84 5232 154 60 32 chr5 109245017 109246201 -93839331 + L1MC1 LINE L1 5096 6305 -28 1837 141 32 7 chr5 109246207 109246490 -93839042 + AluJo SINE Alu 3 292 -20 310 236 65 67 chr5 109246513 109246700 -93838832 + L1ME1 LINE L1 3163 3351 -2795 2012 212 71 101 chr5 109246717 109247440 -93838092 + L1ME1 LINE L1 3941 4684 -1462 2286 79 3 7 chr5 109247440 109247732 -93837800 - AluSg SINE Alu -19 291 1 2012 212 71 101 chr5 109247732 109247959 -93837573 + L1ME1 LINE L1 4684 4856 -1290 609 242 0 8 chr5 109247959 109248091 -93837441 + FLAM_A SINE Alu 1 131 -2 2012 212 71 101 chr5 109248091 109248242 -93837290 + L1ME1 LINE L1 4856 5010 -1136 391 108 0 0 chr5 109248242 109248298 -93837234 + AluJb SINE Alu 211 260 -42 1287 219 84 6 chr5 109248301 109248621 -93836911 + L1ME1 LINE L1 5793 6137 -29 681 172 0 39 chr5 109248839 109248967 -93836565 + FLAM_A SINE Alu 2 124 -9 183 359 39 13 chr5 109249232 109249310 -93836222 + MER5B DNA MER1_type 94 173 -5 598 269 172 36 chr5 109249481 109249743 -93835789 - L2 LINE L2 -40 3273 2961 2947 6 0 0 chr5 109249743 109250061 -93835471 - AluYb8 SINE Alu 0 318 1 598 269 172 36 chr5 109250061 109250106 -93835426 - L2 LINE L2 -352 2961 2924 1906 145 24 0 chr5 109250221 109250510 -93835022 - AluSx SINE Alu -16 296 1 203 263 18 0 chr5 109250552 109250609 -93834923 - L2 LINE L2 -954 2360 2303 30 27 0 0 chr5 109250766 109250803 -93834729 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr5 109252034 109252066 -93833466 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 109252727 109252749 -93832783 + AT_rich Low_complexity Low_complexity 1 22 0 39 22 0 0 chr5 109257097 109257143 -93828389 + AT_rich Low_complexity Low_complexity 1 46 0 2622 199 126 10 chr5 109257419 109258118 -93827414 - L1MC4a LINE L1 0 7808 7029 407 181 0 11 chr5 109258829 109258923 -93826609 + L1MA9 LINE L1 6211 6303 -9 198 333 30 15 chr5 109259231 109259297 -93826235 + MIR SINE MIR 38 104 -104 294 292 0 42 chr5 109259307 109259403 -93826129 + MER96 DNA MER1_type? 83 174 -1 1261 138 40 49 chr5 109259778 109260003 -93825529 - AluSc SINE Alu -86 223 1 21 0 0 0 chr5 109260081 109260102 -93825430 + AT_rich Low_complexity Low_complexity 1 21 0 1671 166 4 0 chr5 109260105 109260383 -93825149 + AluSx SINE Alu 30 308 -4 21 36 0 0 chr5 109260739 109260767 -93824765 + AT_rich Low_complexity Low_complexity 1 28 0 1573 149 33 60 chr5 109262599 109262901 -93822631 + AluJb SINE Alu 1 294 -18 650 264 109 10 chr5 109263087 109263280 -93822252 - L2 LINE L2 -4 3309 3098 683 314 102 37 chr5 109263357 109263682 -93821850 - L2 LINE L2 -337 2977 2632 284 0 0 27 chr5 109264310 109264347 -93821185 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 232 222 14 14 chr5 109264885 109264957 -93820575 + (TA)n Simple_repeat Simple_repeat 2 73 0 226 234 0 0 chr5 109265198 109265245 -93820287 - MIR SINE MIR -40 222 176 195 178 44 0 chr5 109265260 109265305 -93820227 - MIR SINE MIR -215 47 1 216 198 25 25 chr5 109265314 109265395 -93820137 + (TAAA)n Simple_repeat Simple_repeat 1 81 0 752 218 152 33 chr5 109265509 109265752 -93819780 + MER5C DNA MER1_type 52 323 -1 1366 184 12 64 chr5 109265926 109265997 -93819535 + AluJb SINE Alu 1 74 -238 1944 119 23 20 chr5 109265997 109266299 -93819233 - AluSx SINE Alu -7 305 3 1366 184 12 64 chr5 109266299 109266553 -93818979 + AluJb SINE Alu 74 309 -3 378 356 0 0 chr5 109267216 109267393 -93818139 + T-rich Low_complexity Low_complexity 1 177 0 270 0 0 0 chr5 109267824 109267854 -93817678 + (CA)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr5 109268254 109268283 -93817249 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr5 109269569 109269599 -93815933 + (A)n Simple_repeat Simple_repeat 1 30 0 23 33 0 0 chr5 109269653 109269683 -93815849 + AT_rich Low_complexity Low_complexity 1 30 0 1096 183 60 4 chr5 109269714 109269965 -93815567 + L1MA4 LINE L1 6024 6288 -12 1630 160 7 25 chr5 109271044 109271325 -93814207 - AluJo SINE Alu -34 278 3 23 33 0 0 chr5 109271330 109271360 -93814172 + AT_rich Low_complexity Low_complexity 1 30 0 246 265 29 0 chr5 109271479 109271547 -93813985 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 1768 116 0 44 chr5 109272653 109272928 -93812604 + AluSx SINE Alu 37 299 -13 331 299 152 8 chr5 109274937 109275086 -93810446 + L1ME4a LINE L1 5564 5690 -431 1575 205 0 17 chr5 109275086 109275384 -93810148 + AluJb SINE Alu 1 293 -19 331 299 152 8 chr5 109275384 109275478 -93810054 + L1ME4a LINE L1 5690 5842 -279 878 294 115 21 chr5 109276021 109276501 -93809031 + L1MCc LINE L1 11 535 -5888 448 229 0 0 chr5 109276590 109276686 -93808846 + MER96B DNA MER1_type? 1 96 -321 226 159 203 0 chr5 109276735 109276804 -93808728 + MER96B DNA MER1_type? 191 273 -144 1109 253 62 11 chr5 109276806 109277151 -93808381 + L1M4 LINE L1 2732 3109 -3037 1791 185 3 6 chr5 109277151 109277464 -93808068 + AluJb SINE Alu 1 312 0 1109 253 62 11 chr5 109277464 109277589 -93807943 + L1M4 LINE L1 3109 3226 -2920 436 175 134 0 chr5 109277582 109277679 -93807853 + L1M4 LINE L1 3603 3712 -2434 * 230 300 29 0 chr5 109278373 109278443 -93807089 + MIR SINE MIR 176 247 -15 272 314 29 22 chr5 109278473 109278610 -93806922 + L2 LINE L2 2573 2710 -604 216 250 0 0 chr5 109278623 109278671 -93806861 + L2 LINE L2 3261 3308 -5 255 247 39 52 chr5 109278987 109279064 -93806468 - L2 LINE L2 0 3313 3238 216 0 0 0 chr5 109279453 109279477 -93806055 + (T)n Simple_repeat Simple_repeat 1 24 0 1293 164 0 0 chr5 109279713 109279921 -93805611 - AluJb SINE Alu -15 297 90 187 346 58 29 chr5 109279931 109280035 -93805497 - MIR SINE MIR -64 144 38 28 0 0 0 chr5 109281259 109281287 -93804245 + AT_rich Low_complexity Low_complexity 1 28 0 1804 122 24 7 chr5 109281730 109282026 -93803506 + L1PB1 LINE L1 5566 5866 -285 324 0 0 0 chr5 109282027 109282063 -93803469 + (TA)n Simple_repeat Simple_repeat 2 37 0 1376 93 127 0 chr5 109282063 109282268 -93803264 - AluSg/x SINE Alu -7 303 73 2542 56 0 3 chr5 109282268 109282574 -93802958 - AluY SINE Alu -6 305 1 1920 116 3 3 chr5 109282574 109282868 -93802664 + L1PB1 LINE L1 5858 6151 0 1547 172 9 56 chr5 109282909 109283228 -93802304 - AluJo SINE Alu -4 308 5 2155 109 0 3 chr5 109283309 109283602 -93801930 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr5 109283742 109283764 -93801768 + AT_rich Low_complexity Low_complexity 1 22 0 419 148 57 11 chr5 109284192 109284280 -93801252 + MER112 DNA MER1_type 165 256 -4 518 236 257 0 chr5 109284287 109284427 -93801105 + MER5A DNA MER1_type 14 189 0 364 274 43 102 chr5 109284486 109284672 -93800860 + MIR SINE MIR 88 262 0 25 31 0 0 chr5 109284924 109284956 -93800576 + AT_rich Low_complexity Low_complexity 1 32 0 649 226 42 42 chr5 109285184 109285374 -93800158 + L1MB8 LINE L1 5983 6172 -6 236 291 47 55 chr5 109285467 109285594 -93799938 + L2 LINE L2 3120 3245 -68 219 323 118 0 chr5 109285671 109285764 -93799768 + MIR SINE MIR 153 256 -6 583 165 39 0 chr5 109287931 109288034 -93797498 + U6 snRNA snRNA 1 107 0 1364 138 47 44 chr5 109288034 109288389 -93797143 + L1PA16 LINE L1 5781 6166 0 757 216 107 91 chr5 109288920 109289290 -93796242 + L1MC5 LINE L1 7311 7673 -288 1725 161 0 11 chr5 109289290 109289575 -93795957 - AluJb SINE Alu -28 284 3 757 216 107 91 chr5 109289575 109289729 -93795803 + L1MC5 LINE L1 7673 7849 -112 1916 167 0 0 chr5 109289729 109290041 -93795491 + AluSx SINE Alu 1 312 0 757 216 107 91 chr5 109290041 109290123 -93795409 + L1MC5 LINE L1 7849 7928 -33 229 247 55 14 chr5 109291233 109291306 -93794226 + MIR SINE MIR 85 160 -102 22 35 0 0 chr5 109291882 109291911 -93793621 + AT_rich Low_complexity Low_complexity 1 29 0 306 295 98 72 chr5 109292250 109292443 -93793089 + MIR SINE MIR 48 245 -17 566 238 157 27 chr5 109292518 109292703 -93792829 - MER58C DNA MER1_type -3 212 4 2216 105 3 0 chr5 109293027 109293321 -93792211 - AluSp SINE Alu -18 295 1 491 236 132 11 chr5 109293481 109293663 -93791869 + L1MC5 LINE L1 7723 7926 -35 1977 123 25 3 chr5 109293675 109293959 -93791573 + AluSx SINE Alu 6 295 -17 969 158 23 12 chr5 109294125 109294296 -93791236 + AluJb SINE Alu 1 173 -139 423 153 0 0 chr5 109294296 109294368 -93791164 + AluS SINE Alu 224 295 -17 36 23 0 0 chr5 109296397 109296440 -93789092 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr5 109296658 109296687 -93788845 + AT_rich Low_complexity Low_complexity 1 29 0 1067 213 119 44 chr5 109297240 109297559 -93787973 + MER2 DNA MER2_type 2 344 0 2375 84 0 0 chr5 109298201 109298509 -93787023 + AluY SINE Alu 1 308 -3 1926 129 0 39 chr5 109298642 109298952 -93786580 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 109299943 109299964 -93785568 + AT_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr5 109302021 109302052 -93783480 + (CTG)n Simple_repeat Simple_repeat 2 32 0 26 0 0 0 chr5 109303833 109303859 -93781673 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 109304556 109304577 -93780955 + AT_rich Low_complexity Low_complexity 1 21 0 248 184 41 0 chr5 109304689 109304738 -93780794 - L2 LINE L2 -1 3312 3262 226 245 19 0 chr5 109305133 109305186 -93780346 + L2 LINE L2 3246 3299 -14 2310 91 3 0 chr5 109305505 109305812 -93779720 + AluSp SINE Alu 1 308 -5 337 200 96 9 chr5 109305812 109305917 -93779615 + L1MC4 LINE L1 5816 5933 -1875 288 215 108 0 chr5 109307176 109307269 -93778263 - L1MC5 LINE L1 -52 7909 7807 27 49 0 0 chr5 109307322 109307363 -93778169 + AT_rich Low_complexity Low_complexity 1 41 0 1709 200 52 152 chr5 109307435 109308369 -93777163 - L1MC5 LINE L1 -542 7419 6580 315 292 192 23 chr5 109308445 109309113 -93776419 - L1MC4a LINE L1 -1349 6459 5673 2106 257 67 38 chr5 109309193 109309346 -93776186 + L1MC4 LINE L1 6763 6910 -1132 279 0 0 0 chr5 109309346 109309377 -93776155 + (TA)n Simple_repeat Simple_repeat 1 31 0 2106 257 67 38 chr5 109309377 109310092 -93775440 + L1MC4 LINE L1 6910 7656 -386 23 0 0 0 chr5 109310259 109310282 -93775250 + AT_rich Low_complexity Low_complexity 1 23 0 1794 162 3 7 chr5 109310589 109310896 -93774636 + AluSx SINE Alu 3 308 0 1736 164 7 20 chr5 109311389 109311681 -93773851 + AluJo SINE Alu 2 289 -23 27 0 0 0 chr5 109311885 109311912 -93773620 + AT_rich Low_complexity Low_complexity 1 27 0 638 262 14 75 chr5 109312151 109312430 -93773102 + MLT1J LTR MaLR 1 262 -249 333 232 152 0 chr5 109313260 109313359 -93772173 + MER112 DNA MER1_type 1 114 -146 248 238 12 62 chr5 109313902 109314062 -93771470 + L1MC5 LINE L1 7766 7917 -44 1993 146 7 3 chr5 109314110 109314411 -93771121 + AluSq SINE Alu 1 302 -11 2357 102 3 0 chr5 109314466 109314770 -93770762 + AluSp SINE Alu 4 308 -5 2378 63 0 10 chr5 109316260 109316559 -93768973 - AluY SINE Alu -15 296 1 2060 102 44 0 chr5 109316686 109316979 -93768553 + AluSc SINE Alu 1 306 -3 3803 229 82 55 chr5 109317381 109318711 -93766821 + L1MC3 LINE L1 6025 7404 -381 2215 124 0 7 chr5 109318711 109319018 -93766514 + AluSx SINE Alu 1 305 -7 3803 229 82 55 chr5 109319018 109319238 -93766294 + L1MC3 LINE L1 7404 7617 -168 26 30 0 0 chr5 109319239 109319272 -93766260 + AT_rich Low_complexity Low_complexity 1 33 0 322 284 0 0 chr5 109319285 109319373 -93766159 + MIR SINE MIR 123 210 -52 529 230 200 0 chr5 109319603 109319738 -93765794 - MER5A DNA MER1_type -12 177 16 2023 111 10 17 chr5 109320068 109320365 -93765167 + AluSg SINE Alu 1 295 -15 2182 117 0 3 chr5 109320904 109321204 -93764328 + AluSx SINE Alu 1 299 -13 2111 75 34 17 chr5 109321617 109321911 -93763621 - AluSp SINE Alu -14 299 1 1540 170 47 29 chr5 109322172 109322473 -93763059 + AluJb SINE Alu 1 306 0 2242 110 0 7 chr5 109322892 109323200 -93762332 + AluSx SINE Alu 1 306 -6 519 291 60 60 chr5 109323372 109323460 -93762072 - MIR SINE MIR -1 261 174 657 222 0 22 chr5 109323460 109323595 -93761937 - FLAM_C SINE Alu -1 132 1 519 291 60 60 chr5 109323595 109323757 -93761775 - MIR SINE MIR -87 175 11 901 170 112 0 chr5 109323952 109324140 -93761392 + MER3 DNA MER1_type 1 209 0 21 36 0 0 chr5 109324739 109324767 -93760765 + AT_rich Low_complexity Low_complexity 1 28 0 379 273 130 90 chr5 109326235 109326821 -93758711 + L1M2 LINE L1 709 1248 -5601 201 74 0 0 chr5 109327002 109327029 -93758503 + (CCG)n Simple_repeat Simple_repeat 3 29 0 243 226 0 0 chr5 109327103 109327156 -93758376 + (CCG)n Simple_repeat Simple_repeat 2 54 0 765 167 7 0 chr5 109328270 109328408 -93757124 - FLAM_C SINE Alu -2 141 3 2310 114 0 3 chr5 109330436 109330743 -93754789 - AluSx SINE Alu -6 306 1 394 214 37 4 chr5 109330807 109330903 -93754629 - MER2 DNA MER2_type -139 100 4 252 355 93 67 chr5 109331508 109331852 -93753680 - L2 LINE L2 -4 3268 2916 2065 109 30 20 chr5 109332430 109332732 -93752800 + AluY SINE Alu 1 305 -6 389 253 133 25 chr5 109333347 109333505 -93752027 - MER5B DNA MER1_type -3 175 1 644 214 9 86 chr5 109333613 109333833 -93751699 + MER20 DNA MER1_type 17 219 0 1264 238 99 7 chr5 109334089 109334648 -93750884 + L1ME3 LINE L1 5534 6153 -9 739 75 28 0 chr5 109334839 109334946 -93750586 - HY1 scRNA scRNA -1 111 2 233 333 0 0 chr5 109334952 109335012 -93750520 + MIR SINE MIR 47 106 -156 1355 120 113 55 chr5 109335439 109335730 -93749802 - MER46B DNA MER2_type 0 236 54 441 185 0 43 chr5 109335731 109335823 -93749709 + FLAM_A SINE Alu 47 134 -8 252 272 320 0 chr5 109335873 109335976 -93749556 - MIR SINE MIR -108 154 19 246 180 16 16 chr5 109336120 109336181 -93749351 + MLT1K LTR MaLR 522 582 -6 439 330 105 67 chr5 109337436 109337597 -93747935 - L2 LINE L2 -14 3299 3146 559 220 0 53 chr5 109337597 109337729 -93747803 + FLAM_A SINE Alu 1 125 -8 439 330 105 67 chr5 109337729 109338013 -93747519 - L2 LINE L2 -167 3146 2837 29 0 0 0 chr5 109338025 109338054 -93747478 + AT_rich Low_complexity Low_complexity 1 29 0 687 314 90 46 chr5 109338671 109339226 -93746306 + L2 LINE L2 2625 3210 -103 241 301 91 38 chr5 109339606 109339872 -93745660 + MLT1K LTR MaLR 121 392 -223 663 165 66 8 chr5 109340059 109340180 -93745352 - FLAM_A SINE Alu -5 128 1 315 208 110 39 chr5 109340255 109340409 -93745123 + HAL1 LINE L1 2266 2430 -77 327 304 133 25 chr5 109341196 109341354 -93744178 + MER91A DNA MER1_type 19 193 -3 264 270 56 24 chr5 109341491 109341617 -93743915 - MER94 DNA DNA -2 132 3 1147 198 119 29 chr5 109342309 109342652 -93742880 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr5 109342701 109342722 -93742810 + AT_rich Low_complexity Low_complexity 1 21 0 817 279 98 20 chr5 109342783 109343141 -93742391 - HERV16 LTR ERVL -2484 2512 2127 * 1744 294 48 33 chr5 109343138 109343316 -93742216 - HERV16 LTR ERVL -2787 2209 2035 490 73 12 37 chr5 109343316 109343398 -93742134 - MADE1 DNA Mariner 0 80 1 1744 294 48 33 chr5 109343398 109344503 -93741029 - HERV16 LTR ERVL -2961 2035 843 2417 74 0 0 chr5 109345101 109345398 -93740134 - AluY SINE Alu -14 297 1 2441 213 104 73 chr5 109345531 109346367 -93739165 + MER21B LTR ERV1 1 862 -1 1403 142 112 67 chr5 109346377 109346545 -93738987 - MLT1A1 LTR MaLR -15 350 191 2386 88 3 0 chr5 109346545 109346842 -93738690 - AluSp SINE Alu -14 299 2 1403 142 112 67 chr5 109346842 109347003 -93738529 - MLT1A1 LTR MaLR -174 191 6 2040 123 0 4 chr5 109347135 109347412 -93738120 + AluSx SINE Alu 1 276 -36 281 327 45 55 chr5 109347435 109347655 -93737877 - LTR16B LTR ERVL -210 254 37 335 294 55 41 chr5 109347724 109347870 -93737662 + HAL1 LINE L1 267 414 -2093 284 182 0 0 chr5 109347887 109347942 -93737590 + MER58 DNA MER1_type 181 235 -106 2064 145 0 3 chr5 109347975 109348285 -93737247 - AluJb SINE Alu -3 309 1 1051 189 37 0 chr5 109348409 109348626 -93736906 - MER63B DNA MER1_type -203 233 9 1769 139 80 40 chr5 109348644 109348739 -93736793 + MLT1B LTR MaLR 1 91 -299 2201 126 0 7 chr5 109348739 109349041 -93736491 + AluSx SINE Alu 1 300 -12 1769 139 80 40 chr5 109349041 109349318 -93736214 + MLT1B LTR MaLR 91 388 -2 771 185 0 0 chr5 109349397 109349516 -93736016 + FLAM_C SINE Alu 1 119 -14 198 0 0 0 chr5 109349540 109349562 -93735970 + (CAA)n Simple_repeat Simple_repeat 3 24 0 705 156 35 81 chr5 109349625 109349798 -93735734 + MER63 DNA MER1_type 694 858 -203 216 303 0 79 chr5 109349832 109349908 -93735624 - L3 LINE CR1 -1466 111 42 2155 117 0 10 chr5 109350167 109350466 -93735066 + AluSx SINE Alu 1 296 -16 880 191 103 46 chr5 109350650 109350990 -93734542 + MSTD LTR MaLR 1 396 0 29 28 0 0 chr5 109351282 109351318 -93734214 + AT_rich Low_complexity Low_complexity 1 36 0 199 102 20 20 chr5 109351387 109351436 -93734096 + (TA)n Simple_repeat Simple_repeat 2 50 0 34 0 0 0 chr5 109351479 109351513 -93734019 + AT_rich Low_complexity Low_complexity 1 34 0 3219 65 30 7 chr5 109351573 109352007 -93733525 - MLT2A1 LTR ERVL 0 444 1 897 184 50 11 chr5 109352351 109352530 -93733002 - AluJo SINE Alu -7 305 120 25 0 0 0 chr5 109353493 109353518 -93732014 + AT_rich Low_complexity Low_complexity 1 25 0 7685 20 1 0 chr5 109353518 109355135 -93730397 - L1PA4 LINE L1 -5 6150 4535 325 310 9 17 chr5 109355551 109355667 -93729865 + MIR3 SINE MIR 85 199 -9 200 213 66 33 chr5 109355938 109355999 -93729533 + MIR SINE MIR 191 253 -9 * 249 114 0 0 chr5 109355966 109356001 -93729531 + L2 LINE L2 3267 3301 -12 451 113 0 0 chr5 109356004 109356075 -93729457 + L1MB7 LINE L1 6091 6161 -23 205 185 56 0 chr5 109356180 109356234 -93729298 + A-rich Low_complexity Low_complexity 3 59 0 839 169 0 0 chr5 109356274 109356398 -93729134 + AluJo/FLAM SINE Alu 1 124 -188 1853 167 0 0 chr5 109356398 109356680 -93728852 - AluJb SINE Alu -30 282 1 2315 74 3 7 chr5 109356814 109357111 -93728421 + AluSq SINE Alu 1 296 -17 1334 189 25 42 chr5 109357258 109357544 -93727988 + AluJo SINE Alu 14 294 -18 2294 118 0 0 chr5 109357813 109358119 -93727413 - AluSx SINE Alu -6 306 1 380 328 42 0 chr5 109358173 109358292 -93727240 - MIR3 SINE MIR -21 187 64 261 0 0 0 chr5 109358533 109358562 -93726970 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2089 132 0 0 chr5 109358565 109358854 -93726678 - AluSq SINE Alu -24 289 1 282 56 0 0 chr5 109359272 109359308 -93726224 + (CA)n Simple_repeat Simple_repeat 2 37 0 739 228 70 36 chr5 109359416 109359759 -93725773 + LTR16A LTR ERVL 73 449 -1 436 328 83 55 chr5 109359959 109360028 -93725504 + L2 LINE L2 2108 2174 -1140 750 189 0 0 chr5 109360028 109360155 -93725377 + FLAM_C SINE Alu 1 127 -6 436 328 83 55 chr5 109360155 109360482 -93725050 + L2 LINE L2 2174 2515 -799 300 250 125 0 chr5 109360890 109360954 -93724578 - L2 LINE L2 -54 3259 3188 2320 68 7 7 chr5 109362429 109362722 -93722810 + AluSp SINE Alu 1 293 -20 351 238 119 24 chr5 109363070 109363196 -93722336 + L2 LINE L2 3002 3139 -174 258 238 20 119 chr5 109363216 109363367 -93722165 - L1MC5 LINE L1 -77 7884 7749 294 272 87 10 chr5 109363374 109363477 -93722055 + L2 LINE L2 3147 3257 -56 1804 187 10 3 chr5 109363539 109363849 -93721683 - AluJb SINE Alu 0 312 1 280 231 15 15 chr5 109363849 109363914 -93721618 + L2 LINE L2 3249 3313 0 365 171 13 27 chr5 109363960 109364034 -93721498 - MLT1A2 LTR MaLR 0 376 312 1753 196 25 32 chr5 109364034 109364567 -93720965 - L1MB1 LINE L1 -1804 4342 3842 1969 143 37 12 chr5 109364574 109364979 -93720553 + L1MB1 LINE L1 4353 4767 -1379 4519 167 23 13 chr5 109365007 109366184 -93719348 + L1MB1 LINE L1 4973 6167 -1 484 336 58 58 chr5 109366562 109366978 -93718554 + MLT1K LTR MaLR 3 418 -170 593 263 165 18 chr5 109366980 109367204 -93718328 - MIR SINE MIR -5 257 1 280 233 27 100 chr5 109367261 109367343 -93718189 + MLT1K LTR MaLR 405 473 -115 2176 102 3 3 chr5 109367343 109367637 -93717895 - AluSg SINE Alu -16 294 1 280 233 27 100 chr5 109367637 109367704 -93717828 + MLT1K LTR MaLR 473 543 -45 234 284 45 45 chr5 109368360 109368515 -93717017 + L1ME2 LINE L1 5078 5232 -914 1745 166 0 14 chr5 109368599 109368889 -93716643 + AluJb SINE Alu 27 312 0 748 289 138 25 chr5 109368893 109369063 -93716469 + L1ME2 LINE L1 5330 5480 -684 1513 161 36 66 chr5 109369063 109369367 -93716165 + AluJo SINE Alu 1 295 -17 748 289 138 25 chr5 109369367 109369792 -93715740 + L1ME2 LINE L1 5480 5992 -172 305 288 92 0 chr5 109370157 109370310 -93715222 + MIR SINE MIR 47 213 -49 23 0 0 0 chr5 109370402 109370425 -93715107 + AT_rich Low_complexity Low_complexity 1 23 0 858 143 0 15 chr5 109370444 109370577 -93714955 - FLAM_C SINE Alu 0 133 3 2082 128 0 14 chr5 109370611 109370908 -93714624 - AluSx SINE Alu -19 293 1 932 181 0 30 chr5 109371301 109371467 -93714065 + AluJo SINE Alu 1 161 -151 517 161 17 35 chr5 109371493 109371667 -93713865 + GA-rich Low_complexity Low_complexity 1 171 0 458 189 0 0 chr5 109371685 109371780 -93713752 - AluJ/FRAM SINE Alu -1 311 217 619 194 47 16 chr5 109371818 109371947 -93713585 - FLAM_A SINE Alu 0 133 1 2075 124 44 102 chr5 109373219 109373260 -93712272 - MSTB LTR MaLR -1 425 383 1862 152 17 10 chr5 109373260 109373549 -93711983 + AluJb SINE Alu 4 294 -18 347 0 23 0 chr5 109373555 109373598 -93711934 + (GA)n Simple_repeat Simple_repeat 1 44 0 2075 124 44 102 chr5 109373598 109374000 -93711532 - MSTB LTR MaLR -48 378 1 1485 180 29 63 chr5 109376460 109376776 -93708756 - AluJo SINE Alu -7 305 1 776 159 0 36 chr5 109376778 109376916 -93708616 - FLAM_A SINE Alu 0 133 1 242 206 0 0 chr5 109376919 109376982 -93708550 + T-rich Low_complexity Low_complexity 2 64 0 1804 160 0 37 chr5 109377014 109377172 -93708360 - AluJb SINE Alu -23 289 146 435 38 0 0 chr5 109377172 109377225 -93708307 + (TA)n Simple_repeat Simple_repeat 2 54 0 1804 160 0 37 chr5 109377225 109377366 -93708166 - AluJb SINE Alu -166 146 1 768 169 0 8 chr5 109377369 109377493 -93708039 - FLAM_A SINE Alu -10 123 1 25 0 0 0 chr5 109377500 109377525 -93708007 + AT_rich Low_complexity Low_complexity 1 25 0 1268 202 74 61 chr5 109377627 109377781 -93707751 + MSTD LTR MaLR 1 152 -244 2085 126 24 3 chr5 109377781 109378075 -93707457 + AluSx SINE Alu 1 300 -12 1268 202 74 61 chr5 109378075 109378311 -93707221 + MSTD LTR MaLR 152 396 0 874 132 0 0 chr5 109378421 109378542 -93706990 - FLAM_C SINE Alu -22 121 1 4274 155 66 34 chr5 109378954 109380094 -93705438 + L1MA8 LINE L1 5115 6291 0 216 300 221 36 chr5 109380211 109380351 -93705181 + L2 LINE L2 3107 3272 0 711 188 0 0 chr5 109380399 109380511 -93705021 + FLAM_A SINE Alu 4 115 -18 990 177 0 6 chr5 109380841 109381016 -93704516 - FRAM SINE Alu -3 173 1 312 224 37 65 chr5 109381032 109381139 -93704393 + HAL1 LINE L1 143 246 -2261 1265 268 131 69 chr5 109381251 109381956 -93703576 + HAL1 LINE L1 408 1221 -1286 637 164 62 23 chr5 109381956 109382084 -93703448 + AluJo SINE Alu 1 133 -169 1265 268 131 69 chr5 109382084 109382593 -93702939 + HAL1 LINE L1 1221 1697 -810 2078 121 20 10 chr5 109382600 109382897 -93702635 + AluSx SINE Alu 1 300 -12 800 179 19 19 chr5 109382902 109383058 -93702474 + AluJo SINE Alu 136 291 -21 21 0 0 0 chr5 109383058 109383079 -93702453 + AT_rich Low_complexity Low_complexity 1 21 0 308 310 10 70 chr5 109383284 109383484 -93702048 + HAL1 LINE L1 1979 2166 -341 375 321 54 36 chr5 109383539 109383760 -93701772 + HAL1 LINE L1 2283 2507 0 634 289 39 90 chr5 109383840 109384132 -93701400 - LTR16B LTR ERVL 0 464 204 2311 92 0 0 chr5 109384132 109384445 -93701087 + AluSx SINE Alu 1 313 0 634 289 39 90 chr5 109384445 109384639 -93700893 - LTR16B LTR ERVL -260 204 2 183 341 24 0 chr5 109384722 109384804 -93700728 + MIR SINE MIR 110 193 -69 326 276 29 9 chr5 109384966 109385071 -93700461 + MLT1I LTR MaLR 100 206 -203 2002 131 7 36 chr5 109385227 109385532 -93700000 - AluSx SINE Alu -16 296 1 7265 19 6 1 chr5 109385710 109386559 -93698973 + L1PA3 LINE L1 5302 6154 -1 25 0 0 0 chr5 109386559 109386584 -93698948 + AT_rich Low_complexity Low_complexity 1 25 0 897 184 50 11 chr5 109387547 109387726 -93697806 + AluJo SINE Alu 120 305 -7 3219 65 30 7 chr5 109388070 109388504 -93697028 + MLT2A1 LTR ERVL 1 444 0 34 0 0 0 chr5 109388564 109388598 -93696934 + AT_rich Low_complexity Low_complexity 1 34 0 199 102 20 20 chr5 109388641 109388690 -93696842 + (TA)n Simple_repeat Simple_repeat 2 50 0 29 28 0 0 chr5 109388759 109388795 -93696737 + AT_rich Low_complexity Low_complexity 1 36 0 880 191 103 46 chr5 109389087 109389427 -93696105 - MSTD LTR MaLR 0 396 1 2155 117 0 10 chr5 109389611 109389910 -93695622 - AluSx SINE Alu -16 296 1 216 303 0 79 chr5 109390169 109390245 -93695287 + L3 LINE CR1 42 111 -1466 711 157 35 76 chr5 109390279 109390451 -93695081 - MER63 DNA MER1_type -203 857 693 198 0 0 0 chr5 109390514 109390536 -93694996 + (TTG)n Simple_repeat Simple_repeat 3 24 0 771 185 0 0 chr5 109390560 109390679 -93694853 - FLAM_C SINE Alu -14 119 1 622 171 0 43 chr5 109390860 109390977 -93694555 + AluJo SINE Alu 50 161 -151 517 161 17 35 chr5 109391003 109391177 -93694355 + GA-rich Low_complexity Low_complexity 1 171 0 458 189 0 0 chr5 109391195 109391290 -93694242 - AluJ/FRAM SINE Alu -1 311 217 619 194 47 16 chr5 109391329 109391458 -93694074 - FLAM_A SINE Alu 0 133 1 2075 124 44 102 chr5 109392730 109392771 -93692761 - MSTB LTR MaLR -1 425 383 1862 152 17 10 chr5 109392771 109393060 -93692472 + AluJb SINE Alu 4 294 -18 455 0 18 0 chr5 109393066 109393121 -93692411 + (GA)n Simple_repeat Simple_repeat 1 56 0 2075 124 44 102 chr5 109393121 109393523 -93692009 - MSTB LTR MaLR -48 378 1 1454 184 29 63 chr5 109395983 109396298 -93689234 - AluJo SINE Alu -8 304 1 776 159 0 36 chr5 109396300 109396438 -93689094 - FLAM_A SINE Alu 0 133 1 242 206 0 0 chr5 109396441 109396504 -93689028 + T-rich Low_complexity Low_complexity 2 64 0 1846 164 0 14 chr5 109396536 109396694 -93688838 - AluJb SINE Alu -23 289 135 504 48 0 0 chr5 109396694 109396757 -93688775 + (TA)n Simple_repeat Simple_repeat 1 63 0 1846 164 0 14 chr5 109396757 109396891 -93688641 - AluJb SINE Alu -177 135 1 768 169 0 8 chr5 109396894 109397018 -93688514 - FLAM_A SINE Alu -10 123 1 25 0 0 0 chr5 109397025 109397050 -93688482 + AT_rich Low_complexity Low_complexity 1 25 0 296 130 0 0 chr5 109397462 109397508 -93688024 - AluJ/FLAM SINE Alu -240 62 17 3938 130 18 3 chr5 109397508 109398168 -93687364 + L1PB4 LINE L1 5461 6130 -26 1392 186 21 45 chr5 109398169 109398460 -93687072 + AluJb SINE Alu 6 289 -23 24 0 0 0 chr5 109398512 109398536 -93686996 + AT_rich Low_complexity Low_complexity 1 24 0 1060 157 55 71 chr5 109398791 109399046 -93686486 - AluSx SINE Alu -9 303 53 24 32 0 0 chr5 109399055 109399086 -93686446 + AT_rich Low_complexity Low_complexity 1 31 0 2278 91 0 19 chr5 109399141 109399448 -93686084 - AluSg SINE Alu -8 302 2 3773 97 16 9 chr5 109399537 109400113 -93685419 + L1PA13 LINE L1 5564 6143 -20 2220 94 6 9 chr5 109400286 109400614 -93684918 + L1PA13 LINE L1 5818 6144 -19 1347 52 6 0 chr5 109400633 109400805 -93684727 + L1PA8 LINE L1 5997 6169 -3 1756 198 0 3 chr5 109401452 109401755 -93683777 + AluJb SINE Alu 1 302 -10 2608 172 30 38 chr5 109402111 109402668 -93682864 + MLT2B3 LTR ERVL 2 554 0 2178 133 3 0 chr5 109402865 109403174 -93682358 + AluSq SINE Alu 1 310 -3 662 252 178 0 chr5 109403224 109403438 -93682094 - MIR SINE MIR 0 262 11 1794 176 3 10 chr5 109404399 109404695 -93680837 - AluJo SINE Alu -18 294 1 2349 99 3 0 chr5 109405136 109405438 -93680094 + AluSx SINE Alu 1 303 -9 351 298 175 32 chr5 109405522 109405774 -93679758 - L2 LINE L2 -831 2483 2196 315 268 63 55 chr5 109406289 109406416 -93679116 - MER5A DNA MER1_type -6 183 56 243 286 50 79 chr5 109406311 109406451 -93679081 + MER5A DNA MER1_type 38 173 -16 * 1373 244 82 0 chr5 109406542 109406993 -93678539 + Charlie4a DNA MER1_type 17 504 -4 208 320 74 16 chr5 109407237 109407359 -93678173 - MIR SINE MIR -41 221 93 396 313 17 0 chr5 109408868 109408983 -93676549 + MER5B DNA MER1_type 4 120 -58 2465 77 0 3 chr5 109408989 109409289 -93676243 - AluSq SINE Alu -13 300 2 463 285 94 21 chr5 109409736 109409971 -93675561 + L1ME4a LINE L1 5800 6051 -70 4445 142 13 4 chr5 109409995 109410757 -93674775 - L1PB4 LINE L1 0 6156 5388 817 210 72 14 chr5 109410907 109411183 -93674349 + L1MC4a LINE L1 6986 7277 -531 334 305 35 23 chr5 109411376 109411550 -93673982 - L2 LINE L2 -34 3279 3104 331 186 41 10 chr5 109411671 109411768 -93673764 + L1ME1 LINE L1 5151 5250 -896 1757 231 107 77 chr5 109411816 109412589 -93672943 + L1ME1 LINE L1 5254 6057 -109 2046 118 31 3 chr5 109412589 109412876 -93672656 - AluSx SINE Alu -17 295 1 1757 231 107 77 chr5 109412876 109412971 -93672561 + L1ME1 LINE L1 6057 6148 -18 457 308 97 4 chr5 109412991 109413238 -93672294 - L2 LINE L2 -1357 1957 1688 558 271 65 40 chr5 109413242 109413614 -93671918 + L1ME LINE L1 4414 4794 -1352 1299 292 94 42 chr5 109413619 109414212 -93671320 + ERVL LTR ERVL 1821 2450 -3204 2308 100 0 0 chr5 109414212 109414513 -93671019 - AluSx SINE Alu -11 301 1 1299 292 94 42 chr5 109414513 109414743 -93670789 + ERVL LTR ERVL 2450 2667 -2987 2295 326 103 67 chr5 109414791 109416416 -93669116 + ERVL LTR ERVL 2826 4509 -1255 3643 200 37 20 chr5 109416418 109416722 -93668810 + Charlie1a DNA MER1_type 2 299 -2462 743 206 0 0 chr5 109416722 109416848 -93668684 - FLAM_A SINE Alu -7 126 1 3643 200 37 20 chr5 109416848 109417436 -93668096 + Charlie1a DNA MER1_type 299 909 -546 216 0 0 0 chr5 109417689 109417713 -93667819 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2133 88 11 0 chr5 109417720 109417993 -93667539 - AluSq SINE Alu -35 278 3 711 104 130 0 chr5 109418534 109418649 -93666883 + THE1B LTR MaLR 1 130 -234 1234 117 39 30 chr5 109418770 109419001 -93666531 + THE1B LTR MaLR 132 364 0 2232 107 3 0 chr5 109419052 109419343 -93666189 + AluSx SINE Alu 1 292 -20 352 263 13 70 chr5 109419380 109419536 -93665996 + L1ME LINE L1 5518 5664 -457 1244 183 42 0 chr5 109419544 109419784 -93665748 - MSTB LTR MaLR 0 426 177 1043 159 59 0 chr5 109419784 109419954 -93665578 + AluSc SINE Alu 121 300 -9 590 204 130 0 chr5 109419958 109420120 -93665412 - MSTB LTR MaLR -245 183 1 5600 188 49 30 chr5 109420125 109421380 -93664152 - MSTB-int LTR MaLR -6 1645 366 1316 165 111 67 chr5 109421380 109421811 -93663721 - LTR7 LTR ERV1 0 450 1 3376 115 5 26 chr5 109421815 109422380 -93663152 - HERVH LTR ERV1 -4 7709 7157 1407 154 19 4 chr5 109422373 109422639 -93662893 - HERVH LTR ERV1 -1697 6016 5747 * 6094 102 15 4 chr5 109422639 109423574 -93661958 - HERVH LTR ERV1 -2297 4232 3962 766 140 15 0 chr5 109423610 109423746 -93661786 - HERVH LTR ERV1 -3720 3993 3856 802 135 38 8 chr5 109424526 109424659 -93660873 - AluJo SINE Alu -175 137 1 308 298 125 18 chr5 109425864 109426032 -93659500 - Charlie8 DNA MER1_type -2177 240 55 932 243 21 32 chr5 109426069 109426349 -93659183 + L1MC/D LINE L1 5506 5782 -2026 742 226 23 34 chr5 109426509 109426686 -93658846 - FAM SINE Alu 0 175 1 251 282 0 0 chr5 109426738 109426816 -93658716 + (TA)n Simple_repeat Simple_repeat 2 79 0 199 311 66 0 chr5 109426821 109426882 -93658650 + L2 LINE L2 3208 3272 0 192 77 0 0 chr5 109426918 109426944 -93658588 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1715 181 11 3 chr5 109426944 109427231 -93658301 - AluJo SINE Alu -23 289 1 332 271 129 36 chr5 109427403 109427502 -93658030 + MIR SINE MIR 49 166 -96 2063 114 10 0 chr5 109427502 109427791 -93657741 + AluSx SINE Alu 1 292 -20 332 271 129 36 chr5 109427791 109427831 -93657701 + MIR SINE MIR 166 201 -61 216 135 0 0 chr5 109427833 109427870 -93657662 + (TA)n Simple_repeat Simple_repeat 2 38 0 1627 184 30 0 chr5 109428519 109428790 -93656742 - AluJb SINE Alu -29 283 5 1845 164 3 0 chr5 109428804 109429102 -93656430 - AluSq SINE Alu -14 299 1 2124 120 3 22 chr5 109429627 109429944 -93655588 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr5 109430616 109430645 -93654887 + AT_rich Low_complexity Low_complexity 1 29 0 2002 150 7 7 chr5 109430961 109431261 -93654271 - AluSx SINE Alu -12 300 1 534 167 33 0 chr5 109431919 109432039 -93653493 - L1MC4 LINE L1 0 8042 7919 306 316 18 18 chr5 109432254 109432368 -93653164 + L3 LINE CR1 1456 1569 -8 503 331 141 29 chr5 109434020 109434467 -93651065 + L2 LINE L2 1128 1624 -1690 181 368 0 0 chr5 109434847 109434923 -93650609 + L2 LINE L2 1895 1970 -1344 207 0 0 0 chr5 109486625 109486648 -93598884 + (A)n Simple_repeat Simple_repeat 1 23 0 5876 115 11 6 chr5 109487622 109488919 -93596613 + L1PA10 LINE L1 4825 6126 -42 897 78 16 8 chr5 109488921 109489049 -93596483 + L1PA10 LINE L1 6024 6152 -16 20039 59 4 2 chr5 109489484 109492163 -93593369 + L1P2 LINE L1 2788 5472 -682 2820 28 0 0 chr5 109492405 109492723 -93592809 - AluYb8 SINE Alu 0 318 1 2343 113 0 0 chr5 109494104 109494413 -93591119 - AluSg1 SINE Alu 0 309 1 755 274 30 0 chr5 109494721 109494922 -93590610 + MIR SINE MIR 51 257 -5 300 289 67 72 chr5 109495608 109495802 -93589730 - MLT1L LTR MaLR -418 197 5 22 0 0 0 chr5 109496055 109496077 -93589455 + AT_rich Low_complexity Low_complexity 1 22 0 415 203 62 23 chr5 109496148 109496276 -93589256 - L1MC4 LINE L1 -140 7902 7770 906 191 6 6 chr5 109496276 109496438 -93589094 - FRAM SINE Alu -17 159 1 3086 207 81 86 chr5 109496438 109497524 -93588008 - L1MC4 LINE L1 -263 7779 6699 1911 183 101 46 chr5 109497783 109498259 -93587273 - MLT1D LTR MaLR -3 502 1 534 284 61 57 chr5 109498430 109498633 -93586899 - MLT1K LTR MaLR -125 463 257 1561 151 43 33 chr5 109498633 109498932 -93586600 + AluJo SINE Alu 1 302 -10 534 284 61 57 chr5 109498932 109498957 -93586575 - MLT1K LTR MaLR -331 257 234 31 82 0 0 chr5 109499108 109499181 -93586351 + AT_rich Low_complexity Low_complexity 1 73 0 29 28 0 0 chr5 109499235 109499271 -93586261 + AT_rich Low_complexity Low_complexity 1 36 0 5937 107 0 3 chr5 109501980 109503107 -93582425 - L1PA13 LINE L1 -2 6161 5029 1601 194 0 23 chr5 109503379 109503683 -93581849 + AluJb SINE Alu 2 298 -14 515 286 95 11 chr5 109503798 109504081 -93581451 + L2 LINE L2 1665 1971 -1343 603 284 182 15 chr5 109504102 109504437 -93581095 + Charlie7 DNA MER1_type 24 414 -2198 14699 45 3 0 chr5 109504466 109507039 -93578493 - L1PA5 LINE L1 -4 6150 3566 7190 67 21 0 chr5 109507039 109508027 -93577505 + L1P LINE L1 2331 3339 -2807 1558 149 82 25 chr5 109508918 109509273 -93576259 + THE1C LTR MaLR 1 375 0 248 320 102 28 chr5 109510777 109511171 -93574361 + L1ME4a LINE L1 5605 6027 -94 353 291 116 30 chr5 109511780 109511979 -93573553 + MIR SINE MIR 3 218 -44 1878 209 114 28 chr5 109512001 109512499 -93573033 + MLT1F LTR MaLR 2 542 0 204 40 0 0 chr5 109512635 109512660 -93572872 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1738 146 7 11 chr5 109512660 109512941 -93572591 - AluSx SINE Alu -32 280 1 493 258 71 26 chr5 109513380 109513535 -93571997 + MIR SINE MIR 101 262 0 400 327 0 0 chr5 109513769 109513870 -93571662 + MIR3 SINE MIR 105 205 -3 227 79 26 0 chr5 109514142 109514180 -93571352 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 210 37 0 0 chr5 109514448 109514475 -93571057 + (A)n Simple_repeat Simple_repeat 1 27 0 32 26 0 0 chr5 109517524 109517563 -93567969 + AT_rich Low_complexity Low_complexity 1 39 0 244 306 188 0 chr5 109519296 109519381 -93566151 + MIR3 SINE MIR 72 172 -36 203 250 0 0 chr5 109519993 109520037 -93565495 + L3 LINE CR1 1528 1571 -6 609 268 78 59 chr5 109520120 109520508 -93565024 - MLT1J2 LTR MaLR -3 447 3 908 252 72 31 chr5 109521010 109521359 -93564173 + MLT1G1 LTR MaLR 72 434 -161 246 226 0 0 chr5 109521609 109521662 -93563870 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 183 222 25 99 chr5 109522516 109522597 -93562935 - L3 LINE CR1 -887 690 616 252 0 0 0 chr5 109522770 109522798 -93562734 + (TC)n Simple_repeat Simple_repeat 1 28 0 2269 67 0 3 chr5 109522827 109523143 -93562389 + AluY SINE Alu 1 315 0 315 329 72 29 chr5 109523159 109523366 -93562166 + MLT1J LTR MaLR 99 314 -197 1206 157 20 47 chr5 109523498 109523824 -93561708 + AluY SINE Alu 3 301 0 592 322 46 38 chr5 109523828 109524194 -93561338 + MLT1J LTR MaLR 99 467 -44 266 318 34 0 chr5 109524639 109524727 -93560805 + L2 LINE L2 3182 3272 0 1060 160 34 19 chr5 109524946 109525152 -93560380 + MER3 DNA MER1_type 1 209 0 269 26 26 0 chr5 109525370 109525408 -93560124 + (CA)n Simple_repeat Simple_repeat 2 40 0 2370 173 53 95 chr5 109525711 109525927 -93559605 - L1 LINE L1 -1463 4683 4460 186 43 0 0 chr5 109525927 109525950 -93559582 + (TA)n Simple_repeat Simple_repeat 2 24 0 2155 122 13 0 chr5 109525950 109526253 -93559279 - AluSx SINE Alu -5 307 1 2370 173 53 95 chr5 109526253 109526783 -93558749 - L1 LINE L1 -1684 4462 3967 358 316 0 0 chr5 109526845 109526940 -93558592 + MIR SINE MIR 168 262 0 1197 224 83 68 chr5 109527204 109527506 -93558026 - L1ME2 LINE L1 -1 6163 5850 1836 145 45 0 chr5 109527506 109527795 -93557737 + AluSx SINE Alu 3 304 -8 1197 224 83 68 chr5 109527795 109527988 -93557544 - L1ME2 LINE L1 -314 5850 5661 645 173 55 24 chr5 109528014 109528141 -93557391 - FLAM_A SINE Alu -2 131 1 7329 167 44 57 chr5 109528141 109529803 -93555729 - L1MCa LINE L1 -4764 1662 22 310 169 31 0 chr5 109529806 109529871 -93555661 - L1ME2 LINE L1 -473 5691 5625 936 201 26 5 chr5 109529936 109530125 -93555407 - MLT1A2 LTR MaLR 0 374 182 219 186 0 0 chr5 109530159 109530202 -93555330 + GA-rich Low_complexity Low_complexity 3 45 0 809 229 18 6 chr5 109530221 109530391 -93555141 - MLT1A2 LTR MaLR -202 172 1 1396 200 0 33 chr5 109530602 109530902 -93554630 + MLT1A1 LTR MaLR 1 290 -75 4368 216 24 8 chr5 109530902 109531789 -93553743 - L1M1 LINE L1 -6647 918 18 5947 162 13 3 chr5 109531792 109533387 -93552145 - L1P4 LINE L1 -378 5787 4182 21 0 0 0 chr5 109533406 109533427 -93552105 + AT_rich Low_complexity Low_complexity 1 21 0 1796 226 42 48 chr5 109534601 109535142 -93550390 + MLT1F LTR MaLR 5 542 0 1736 154 90 3 chr5 109535515 109535826 -93549706 + MLT2C1 LTR ERVL 4 341 -56 236 146 36 0 chr5 109535829 109535884 -93549648 + (TG)n Simple_repeat Simple_repeat 2 58 0 230 150 0 0 chr5 109535888 109535928 -93549604 + MLT2C1 LTR ERVL 358 397 0 266 205 39 26 chr5 109535969 109536047 -93549485 + MLT1J LTR MaLR 110 188 -323 2092 130 3 0 chr5 109536052 109536351 -93549181 - AluSx SINE Alu -12 300 1 345 285 32 51 chr5 109536479 109536637 -93548895 - MLT1K LTR MaLR -2 586 432 644 279 37 62 chr5 109536691 109536963 -93548569 - MLT1K LTR MaLR -319 269 5 1579 164 13 52 chr5 109537479 109537784 -93547748 + AluJb SINE Alu 1 293 -19 23 0 0 0 chr5 109538010 109538033 -93547499 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 109538179 109538227 -93547305 + AT_rich Low_complexity Low_complexity 1 48 0 2305 83 0 23 chr5 109538656 109538957 -93546575 - AluSg SINE Alu -16 294 1 358 292 42 0 chr5 109539249 109539345 -93546187 + MIR SINE MIR 35 134 -128 1337 231 107 59 chr5 109541151 109541645 -93543887 - MLT2B1 LTR ERVL 0 520 3 2420 234 63 12 chr5 109543416 109544415 -93541117 - L1MC4 LINE L1 -138 7904 6958 195 42 0 0 chr5 109544415 109544439 -93541093 + (CATATA)n Simple_repeat Simple_repeat 5 28 0 8193 124 11 11 chr5 109544442 109545741 -93539791 + HSMAR2 DNA Mariner 2 1299 -3 2420 234 63 12 chr5 109545741 109545822 -93539710 - L1MC4 LINE L1 -1085 6957 6882 1575 196 3 29 chr5 109545822 109546133 -93539399 - AluJb SINE Alu -9 303 1 2420 234 63 12 chr5 109546133 109546222 -93539310 - L1MC4 LINE L1 -1160 6882 6511 985 147 98 4 chr5 109546238 109546463 -93539069 - L1MA8 LINE L1 -1 6290 6045 22 35 0 0 chr5 109546494 109546523 -93539009 + AT_rich Low_complexity Low_complexity 1 29 0 1785 248 38 58 chr5 109547006 109547610 -93537922 + MLT1E LTR MaLR 2 593 0 254 280 11 21 chr5 109547721 109547814 -93537718 + GA-rich Low_complexity Low_complexity 2 93 0 348 278 28 21 chr5 109547889 109548033 -93537499 - L1MC5 LINE L1 -861 7100 6956 609 295 100 8 chr5 109548104 109548355 -93537177 - L1MC4a LINE L1 -977 6831 6558 918 258 59 124 chr5 109548413 109548986 -93536546 - MER77 LTR ERV1 -11 594 111 469 265 14 41 chr5 109548969 109549116 -93536416 - MER77 LTR ERV1 -403 202 60 * 1003 286 51 33 chr5 109549390 109549820 -93535712 - MLT1J1 LTR MaLR -8 438 1 223 281 0 35 chr5 109550052 109550109 -93535423 + L2 LINE L2 3215 3269 -3 1319 73 0 0 chr5 109550756 109550933 -93534599 - L1PA4 LINE L1 0 6155 5979 4375 27 21 0 chr5 109551139 109551662 -93533870 - L1PA4 LINE L1 -3 6152 5619 259 50 0 0 chr5 109552128 109552168 -93533364 - L1MA3 LINE L1 0 6305 6266 561 337 30 10 chr5 109553096 109553298 -93532234 + MIR SINE MIR 47 252 -10 213 255 0 0 chr5 109553977 109554024 -93531508 + L2 LINE L2 3221 3267 -5 1914 111 0 4 chr5 109554533 109554794 -93530738 + AluSq SINE Alu 1 260 -53 692 64 0 11 chr5 109554858 109554952 -93530580 - L1PB2 LINE L1 -41 6110 6018 321 307 93 21 chr5 109555060 109555200 -93530332 + MIR SINE MIR 41 190 -72 264 329 268 9 chr5 109556006 109556219 -93529313 + L2 LINE L2 19 286 -3028 500 268 21 0 chr5 109556293 109556435 -93529097 + LTR65 LTR ERV1 21 165 -504 449 261 33 49 chr5 109556562 109556781 -93528751 + LTR65 LTR ERV1 396 663 -6 4704 264 91 92 chr5 109556788 109557741 -93527791 + L2 LINE L2 286 1238 -2076 2015 161 57 12 chr5 109557741 109558145 -93527387 - L1MB3 LINE L1 -2 6181 5760 4704 264 91 92 chr5 109558145 109559444 -93526088 + L2 LINE L2 1238 2537 -777 780 284 78 44 chr5 109559481 109559802 -93525730 + L2 LINE L2 2982 3313 0 391 301 142 35 chr5 109559936 109560162 -93525370 - MIR SINE MIR -2 260 11 524 208 92 8 chr5 109561046 109561166 -93524366 - FLAM_A SINE Alu -3 130 1 774 180 145 0 chr5 109561800 109562000 -93523532 - L1M4 LINE L1 -3316 2830 2602 1460 201 84 89 chr5 109562001 109562393 -93523139 - MLT1C LTR MaLR 0 390 1 431 189 0 63 chr5 109562424 109562535 -93522997 - L1M4 LINE L1 -3579 2567 2464 366 272 65 5 chr5 109562635 109562819 -93522713 - L1M4 LINE L1 -3692 2454 2260 25 31 0 0 chr5 109563192 109563224 -93522308 + AT_rich Low_complexity Low_complexity 1 32 0 1339 243 84 100 chr5 109565516 109565581 -93519951 - Charlie7 DNA MER1_type 0 2612 2547 1895 146 35 0 chr5 109565581 109565869 -93519663 + AluSx SINE Alu 1 298 -14 1339 243 84 100 chr5 109565869 109566599 -93518933 - Charlie7 DNA MER1_type -65 2547 1841 2147 123 13 0 chr5 109566599 109566901 -93518631 + AluSx SINE Alu 1 306 -6 1339 243 84 100 chr5 109566901 109567309 -93518223 - Charlie7 DNA MER1_type -771 1841 1428 271 239 162 14 chr5 109567417 109567559 -93517973 - Charlie7 DNA MER1_type -2445 167 5 500 332 0 62 chr5 109567573 109567766 -93517766 - MER5A DNA MER1_type -2 187 7 2029 147 39 9 chr5 109569000 109569371 -93516161 + L1MA3 LINE L1 5063 5460 -844 2017 155 14 11 chr5 109569371 109569725 -93515807 + THE1A LTR MaLR 1 355 0 2029 147 39 9 chr5 109569725 109569900 -93515632 + L1MA3 LINE L1 5460 5628 -676 6563 49 134 65 chr5 109569900 109570993 -93514539 - MER11A LTR ERVK 0 1266 1 3849 116 71 2 chr5 109570993 109571625 -93513907 + L1MA3 LINE L1 5623 6298 -7 3232 136 15 8 chr5 109571642 109572730 -93512802 + L1MC1 LINE L1 5188 6332 -1 19100 98 16 25 chr5 109572925 109575260 -93510272 + L1P LINE L1 11 2316 -3830 216 0 0 0 chr5 109575260 109575284 -93510248 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 19100 98 16 25 chr5 109575284 109575806 -93509726 + L1P LINE L1 2316 2841 -3305 306 319 107 6 chr5 109577105 109577274 -93508258 - MIR SINE MIR -40 222 37 1694 161 29 0 chr5 109577416 109577742 -93507790 - AluSx SINE Alu 0 334 1 4793 123 7 3 chr5 109578668 109579394 -93506138 + L1PB3 LINE L1 5423 6151 -3 341 241 106 59 chr5 109579495 109579665 -93505867 - HAL1 LINE L1 -2 2505 2328 1970 153 10 0 chr5 109579675 109579976 -93505556 - AluSx SINE Alu -8 304 1 1490 207 81 54 chr5 109580016 109580495 -93505037 + MLT1D LTR MaLR 6 497 -8 2582 257 106 75 chr5 109580506 109580903 -93504629 - HAL1 LINE L1 -220 2287 1904 198 0 0 0 chr5 109580912 109580934 -93504598 + (TTAAA)n Simple_repeat Simple_repeat 1 22 0 2503 102 16 26 chr5 109580934 109581305 -93504227 - L1PA10 LINE L1 -18 6150 5782 2582 257 106 75 chr5 109581305 109582873 -93502659 - HAL1 LINE L1 -603 1904 260 613 259 13 29 chr5 109583240 109583479 -93502053 - L1ME3A LINE L1 -205 5965 5731 189 226 0 0 chr5 109585031 109585084 -93500448 + T-rich Low_complexity Low_complexity 3 55 0 522 201 64 35 chr5 109586820 109587026 -93498506 - MER58 DNA MER1_type 0 2420 2 21 36 0 0 chr5 109588242 109588270 -93497262 + AT_rich Low_complexity Low_complexity 1 28 0 409 153 34 191 chr5 109588454 109588663 -93496869 + MER104 DNA Tc2 2 177 -3 535 113 245 0 chr5 109589142 109589248 -93496284 + FLAM_C SINE Alu 1 132 -1 189 347 0 53 chr5 109589343 109589418 -93496114 - L2 LINE L2 -260 3012 2942 661 11 0 43 chr5 109589488 109589581 -93495951 + L1PA4 LINE L1 6067 6155 0 198 0 0 0 chr5 109590554 109590576 -93494956 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 339 0 69 chr5 109592201 109592331 -93493201 - MLT1K LTR MaLR -453 135 15 227 229 86 38 chr5 109593117 109593222 -93492310 - L1ME3A LINE L1 0 6170 6061 24 53 0 0 chr5 109593953 109593991 -93491541 + AT_rich Low_complexity Low_complexity 1 38 0 180 286 51 31 chr5 109594007 109594105 -93491427 - L2 LINE L2 -923 2391 2292 682 198 25 13 chr5 109594121 109594278 -93491254 + L1MA8 LINE L1 6129 6287 -4 191 286 0 0 chr5 109594543 109594592 -93490940 - MIR SINE MIR -30 232 184 1337 176 11 22 chr5 109596019 109596286 -93489246 - L1PB4 LINE L1 -2 6154 5891 14699 45 3 0 chr5 109596614 109599190 -93486342 - L1PA5 LINE L1 -8 6146 3566 8591 64 17 0 chr5 109599190 109600354 -93485178 + L1P LINE L1 2331 3514 -2632 297 29 0 0 chr5 109600428 109600462 -93485070 + U2 snRNA snRNA 1 34 -154 22 35 0 0 chr5 109600557 109600586 -93484946 + AT_rich Low_complexity Low_complexity 1 29 0 555 308 106 55 chr5 109600831 109601282 -93484250 - MLT1J LTR MaLR -35 476 3 219 36 0 0 chr5 109601665 109601693 -93483839 + (TTA)n Simple_repeat Simple_repeat 3 30 0 6327 38 5 1 chr5 109601693 109602455 -93483077 - L1PA3 LINE L1 -18 6137 5373 437 54 0 0 chr5 109604175 109604231 -93481301 - L1PA3 LINE L1 -1043 5103 5048 4129 100 25 5 chr5 109605488 109606116 -93479416 - L1MA2 LINE L1 0 6304 5664 21 0 0 0 chr5 109607678 109607699 -93477833 + AT_rich Low_complexity Low_complexity 1 21 0 2395 77 7 0 chr5 109607939 109608237 -93477295 + AluSg SINE Alu 1 300 -10 1264 211 233 28 chr5 109608584 109609028 -93476504 - SATR1 Satellite Satellite -2 534 1 898 185 203 122 chr5 109609051 109609479 -93476053 - SATR1 Satellite Satellite -1 469 7 1244 191 278 13 chr5 109609504 109610258 -93475274 - SATR1 Satellite Satellite -2 954 1 1100 222 198 48 chr5 109610287 109611329 -93474203 - SATR1 Satellite Satellite -2 1198 1 2424 163 115 15 chr5 109611373 109614660 -93470872 - SATR1 Satellite Satellite 0 3616 1 2335 172 118 1 chr5 109614689 109615622 -93469910 - SATR1 Satellite Satellite 0 1042 1 2419 153 119 12 chr5 109615640 109619348 -93466184 - SATR1 Satellite Satellite -3 4103 1 2377 166 138 0 chr5 109619381 109620371 -93465161 - SATR1 Satellite Satellite 0 1126 1 1873 192 126 14 chr5 109620399 109620821 -93464711 - SATR1 Satellite Satellite 0 470 2 2364 165 101 25 chr5 109620846 109622987 -93462545 - SATR1 Satellite Satellite 0 2305 1 2318 176 114 2 chr5 109623014 109624038 -93461494 - SATR1 Satellite Satellite -2 1138 1 2229 177 105 9 chr5 109624071 109625398 -93460134 - SATR1 Satellite Satellite 0 1454 1 2192 175 114 22 chr5 109625426 109626015 -93459517 - SATR1 Satellite Satellite 0 643 1 2422 172 106 3 chr5 109626047 109627298 -93458234 - SATR1 Satellite Satellite 0 1379 1 2421 168 109 22 chr5 109627316 109630803 -93454729 - SATR1 Satellite Satellite 0 3788 1 2603 170 104 15 chr5 109630833 109639745 -93445787 - SATR1 Satellite Satellite 0 9702 1 2422 165 111 4 chr5 109639772 109642070 -93443462 - SATR1 Satellite Satellite 0 2542 1 2443 177 107 4 chr5 109642098 109643957 -93441575 - SATR1 Satellite Satellite -1 2049 1 2328 209 144 74 chr5 109643987 109645510 -93440022 + SATR1 Satellite Satellite 1 2059 -230 2438 88 194 3 chr5 109645510 109645886 -93439646 + LTR7 LTR ERV1 1 448 -2 2328 209 144 74 chr5 109645886 109646086 -93439446 + SATR1 Satellite Satellite 2059 2244 -45 2403 185 140 37 chr5 109646119 109649434 -93436098 + SATR1 Satellite Satellite 1 3657 -3 2377 170 110 16 chr5 109649446 109650999 -93434533 + SATR1 Satellite Satellite 1 1698 -110 5263 183 29 5 chr5 109650999 109652430 -93433102 + L1PA15 LINE L1 4713 6164 -1 2407 282 52 5 chr5 109653116 109653379 -93432153 - L2 LINE L2 -531 2783 2534 2445 77 0 3 chr5 109653379 109653690 -93431842 - AluY SINE Alu -1 310 1 2407 282 52 5 chr5 109653690 109654174 -93431358 - L2 LINE L2 -780 2534 2001 1699 209 14 14 chr5 109654190 109654544 -93430988 - MLT1A1 LTR MaLR -11 354 1 4778 256 81 45 chr5 109654593 109655074 -93430458 - L2 LINE L2 -1491 1823 1361 1678 152 4 0 chr5 109655074 109655342 -93430190 + AluSx SINE Alu 40 308 0 4778 256 81 45 chr5 109655342 109655431 -93430101 - L2 LINE L2 -1953 1361 1277 3152 179 70 2 chr5 109655431 109655957 -93429575 - MER68 LTR ERV1 0 562 1 4778 256 81 45 chr5 109655957 109657109 -93428423 - L2 LINE L2 -2037 1277 36 25 51 0 0 chr5 109657381 109657420 -93428112 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr5 109657673 109657697 -93427835 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 109658115 109658136 -93427396 + AT_rich Low_complexity Low_complexity 1 21 0 445 262 0 10 chr5 109658575 109658678 -93426854 + MIR SINE MIR 41 142 -120 253 226 48 0 chr5 109660059 109660121 -93425411 - Charlie8 DNA MER1_type -1009 1408 1344 387 268 9 73 chr5 109660240 109660444 -93425088 - MIR SINE MIR -41 221 30 180 276 218 0 chr5 109660509 109660596 -93424936 - L2 LINE L2 0 3313 3208 2516 140 3 8 chr5 109660600 109660964 -93424568 - THE1B LTR MaLR 0 364 3 25 65 0 0 chr5 109661403 109661449 -93424083 + AT_rich Low_complexity Low_complexity 1 46 0 1138 232 49 81 chr5 109662819 109663009 -93422523 + MLT1C LTR MaLR 1 196 -271 744 192 8 23 chr5 109663009 109663139 -93422393 + FLAM_A SINE Alu 3 130 -3 1138 232 49 81 chr5 109663139 109663379 -93422153 + MLT1C LTR MaLR 196 417 -50 29 0 0 0 chr5 109665403 109665432 -93420100 + AT_rich Low_complexity Low_complexity 1 29 0 2810 7 0 0 chr5 109665439 109665743 -93419789 + AluY SINE Alu 1 304 -7 232 208 0 19 chr5 109666345 109666398 -93419134 + L2 LINE L2 3262 3313 0 21 71 0 0 chr5 109666408 109666450 -93419082 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 109666566 109666591 -93418941 + AT_rich Low_complexity Low_complexity 1 25 0 15631 172 50 11 chr5 109666611 109666956 -93418576 - L1PB1 LINE L1 -3 6864 6534 390 42 0 0 chr5 109666956 109667004 -93418528 + (TG)n Simple_repeat Simple_repeat 2 49 0 15631 172 50 11 chr5 109667004 109668247 -93417285 - L1PB1 LINE L1 -333 6534 5342 181 0 69 0 chr5 109668247 109668276 -93417256 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 15631 172 50 11 chr5 109668276 109673249 -93412283 - L1PB1 LINE L1 -1525 5342 1 234 297 36 43 chr5 109674297 109674435 -93411097 + MIR SINE MIR 72 208 -54 1278 149 67 12 chr5 109674602 109674857 -93410675 - L1PA11 LINE L1 0 6174 5906 518 235 65 71 chr5 109675042 109675264 -93410268 - L1ME4a LINE L1 -237 5884 5663 2156 124 24 0 chr5 109675264 109675594 -93409938 + L1PA15 LINE L1 5819 6156 -9 518 235 65 71 chr5 109675594 109675695 -93409837 - L1ME4a LINE L1 -458 5663 5563 5056 94 15 9 chr5 109676224 109676972 -93408560 + L1MA2 LINE L1 5553 6304 0 256 328 0 0 chr5 109677072 109677139 -93408393 + L2 LINE L2 3244 3310 -3 314 305 23 8 chr5 109677193 109677321 -93408211 + L1ME4a LINE L1 5974 6103 -18 221 56 0 28 chr5 109678041 109678077 -93407455 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1781 208 59 4 chr5 109678185 109678657 -93406875 - L1 LINE L1 -1736 4234 3737 6724 198 35 12 chr5 109678698 109680584 -93404948 + L1PA15-16 LINE L1 1 1715 -5134 2170 122 0 0 chr5 109680584 109680880 -93404652 + AluSx SINE Alu 1 296 -16 6724 198 35 12 chr5 109680880 109681094 -93404438 + L1PA15-16 LINE L1 1715 1923 -4926 8050 201 27 56 chr5 109681097 109682835 -93402697 - L1P4 LINE L1 -439 5722 3935 2147 142 25 0 chr5 109682835 109683189 -93402343 + L1PA13 LINE L1 5796 6163 0 8050 201 27 56 chr5 109683189 109684318 -93401214 - L1P4 LINE L1 -2226 3935 2951 405 0 0 0 chr5 109684318 109684363 -93401169 + (TG)n Simple_repeat Simple_repeat 2 46 0 8050 201 27 56 chr5 109684363 109684500 -93401032 - L1P4 LINE L1 -3210 2951 2812 674 160 0 0 chr5 109684501 109684607 -93400925 - AluSx SINE Alu -13 299 194 1055 113 0 0 chr5 109684608 109684749 -93400783 - AluSx SINE Alu -171 141 1 1117 268 36 34 chr5 109684749 109685220 -93400312 - L1 LINE L1 -3325 2645 2174 1608 196 50 14 chr5 109685236 109685655 -93399877 - L1 LINE L1 -2514 3632 3199 * 2468 265 86 16 chr5 109685654 109687148 -93398384 - L1 LINE L1 -3969 2001 371 1569 301 26 23 chr5 109687165 109687893 -93397639 - L1 LINE L1 -5379 512 10 23 0 0 0 chr5 109689168 109689191 -93396341 + AT_rich Low_complexity Low_complexity 1 23 0 208 278 216 10 chr5 109689450 109689547 -93395985 + MIR SINE MIR 97 213 -49 2503 147 31 5 chr5 109689668 109690083 -93395449 + MSTB LTR MaLR 1 426 0 8180 181 37 41 chr5 109690083 109690438 -93395094 + MSTB-int LTR MaLR 1 356 -1295 2804 22 0 12 chr5 109690438 109690758 -93394774 - AluYb8 SINE Alu -2 316 1 8180 181 37 41 chr5 109690758 109692053 -93393479 + MSTB-int LTR MaLR 356 1645 -6 1332 195 17 0 chr5 109692059 109692300 -93393232 + MSTB LTR MaLR 1 245 -181 462 65 0 78 chr5 109692294 109692371 -93393161 + MSTB LTR MaLR 356 426 0 * 181 260 73 62 chr5 109692868 109692964 -93392568 + MIR SINE MIR 1 97 -165 1838 161 3 16 chr5 109693015 109693326 -93392206 - AluSx SINE Alu -5 307 1 363 297 11 0 chr5 109693691 109693782 -93391750 - MIR SINE MIR -114 148 57 257 294 95 142 chr5 109693999 109694370 -93391162 + L2 LINE L2 2255 2591 -723 392 69 0 0 chr5 109694370 109694428 -93391104 + L1PA6 LINE L1 6096 6153 -1 257 294 95 142 chr5 109694428 109694635 -93390897 + L2 LINE L2 2591 2806 -508 224 352 83 37 chr5 109694926 109695034 -93390498 + L2 LINE L2 3141 3253 -19 263 323 30 53 chr5 109695177 109695310 -93390222 + MIR SINE MIR 77 206 -56 331 213 0 13 chr5 109695467 109695542 -93389990 + L2 LINE L2 3189 3262 -51 29 28 0 0 chr5 109695752 109695788 -93389744 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr5 109695856 109695891 -93389641 + AT_rich Low_complexity Low_complexity 1 35 0 357 100 71 14 chr5 109696042 109696112 -93389420 - L1MA8 LINE L1 -354 5937 5864 * 770 218 69 11 chr5 109696101 109696289 -93389243 + L1MA9 LINE L1 6062 6260 -52 197 32 0 32 chr5 109696289 109696320 -93389212 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 202 230 40 81 chr5 109697368 109697442 -93388090 - L2 LINE L2 -18 3254 3184 51 31 0 0 chr5 109697928 109697993 -93387539 + AT_rich Low_complexity Low_complexity 1 65 0 303 271 135 15 chr5 109698085 109698218 -93387314 - MIR SINE MIR -14 248 100 402 113 0 0 chr5 109698218 109698280 -93387252 - AluSp/q SINE Alu -18 295 234 214 333 13 26 chr5 109698280 109698358 -93387174 - MIR SINE MIR -149 113 37 39 0 0 0 chr5 109699641 109699680 -93385852 + AT_rich Low_complexity Low_complexity 1 39 0 1114 142 0 0 chr5 109700544 109700699 -93384833 - FRAM SINE Alu -25 151 1 369 242 38 23 chr5 109700762 109700894 -93384638 + MER94 DNA DNA 1 134 0 600 233 18 43 chr5 109701007 109701170 -93384362 + MLT1F1 LTR MaLR 1 159 -434 886 240 82 19 chr5 109701415 109701682 -93383850 + MLT1F1 LTR MaLR 284 567 0 311 279 74 58 chr5 109701730 109702095 -93383437 - L1M4 LINE L1 -1830 4316 3946 29 70 0 0 chr5 109702172 109702229 -93383303 + AT_rich Low_complexity Low_complexity 1 57 0 2154 134 0 0 chr5 109702929 109703236 -93382296 + AluSx SINE Alu 1 307 -5 2438 81 0 0 chr5 109703581 109703889 -93381643 + AluSq SINE Alu 1 308 -5 21 36 0 0 chr5 109705170 109705198 -93380334 + AT_rich Low_complexity Low_complexity 1 28 0 219 43 43 22 chr5 109705603 109705649 -93379883 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 7509 25 1 1 chr5 109705654 109706535 -93378997 - L1PA3 LINE L1 -21 6134 5254 27 29 0 0 chr5 109706929 109706963 -93378569 + AT_rich Low_complexity Low_complexity 1 34 0 323 336 35 14 chr5 109706963 109707106 -93378426 + MIR3 SINE MIR 42 187 -21 415 290 95 35 chr5 109707322 109707522 -93378010 + MIR SINE MIR 8 219 -43 235 316 68 51 chr5 109708161 109708338 -93377194 - MLT1J2 LTR MaLR -8 442 263 185 220 34 102 chr5 109709801 109709860 -93375672 - L2 LINE L2 -34 3279 3225 28 0 0 0 chr5 109710570 109710598 -93374934 + AT_rich Low_complexity Low_complexity 1 28 0 221 339 0 0 chr5 109711055 109711114 -93374418 + polypurine Low_complexity Low_complexity 3 61 0 225 196 0 0 chr5 109711143 109711194 -93374338 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 306 0 0 0 chr5 109711347 109711381 -93374151 + (CA)n Simple_repeat Simple_repeat 1 34 0 1201 232 0 12 chr5 109711624 109711870 -93373662 - AluJo SINE Alu -59 253 11 2073 237 37 2 chr5 109711882 109712392 -93373140 + L1 LINE L1 2555 3082 -3064 2182 59 0 0 chr5 109712393 109712666 -93372866 - L1P LINE L1 -1154 4992 4720 2295 59 0 0 chr5 109712666 109712971 -93372561 + L1P LINE L1 5000 5304 -842 * 6892 32 0 16 chr5 109712968 109713838 -93371694 - L1PA3 LINE L1 -71 6084 5229 258 0 0 0 chr5 109713834 109713869 -93371663 + L1PA3 LINE L1 6118 6152 -3 * 27 0 0 0 chr5 109713869 109713896 -93371636 + AT_rich Low_complexity Low_complexity 1 27 0 1194 99 58 5 chr5 109713922 109714113 -93371419 + L1PB1 LINE L1 5950 6150 -1 1030 167 35 53 chr5 109714132 109714386 -93371146 + L1MB8 LINE L1 5934 6334 0 7071 40 2 0 chr5 109714391 109715250 -93370282 + L1PA5 LINE L1 5293 6153 -1 324 152 30 0 chr5 109715244 109715310 -93370222 + L1M LINE L1 5272 5339 -2446 6349 152 81 152 chr5 109715316 109716551 -93368981 + L1 LINE L1 3073 4366 -1780 1183 232 63 4 chr5 109716551 109716705 -93368827 - AluJo SINE Alu -21 291 115 261 0 0 0 chr5 109716705 109716734 -93368798 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1183 232 63 4 chr5 109716734 109716833 -93368699 - AluJo SINE Alu -197 115 23 6349 152 81 152 chr5 109716833 109717476 -93368056 + L1 LINE L1 4366 5053 -1093 1714 131 0 7 chr5 109768262 109768537 -93316995 - L1PB1 LINE L1 -3 6148 5876 264 307 39 31 chr5 109770498 109770625 -93314907 + L2 LINE L2 2112 2239 -1075 680 292 90 82 chr5 109771161 109771527 -93314005 + LTR16A LTR ERVL 68 436 -14 186 292 0 21 chr5 109771603 109771651 -93313881 - L2 LINE L2 -87 3185 3139 29 0 0 0 chr5 109772192 109772221 -93313311 + AT_rich Low_complexity Low_complexity 1 29 0 526 340 47 0 chr5 109772221 109772412 -93313120 + L2 LINE L2 2552 2751 -563 26 0 0 0 chr5 109772425 109772451 -93313081 + AT_rich Low_complexity Low_complexity 1 26 0 563 291 49 45 chr5 109773056 109773300 -93312232 + HERVL LTR ERVL 5210 5454 -200 12021 27 1 15 chr5 109773968 109776214 -93309318 - L1PA2 LINE L1 -1 6154 3929 31 76 0 0 chr5 109776502 109776568 -93308964 + AT_rich Low_complexity Low_complexity 1 66 0 1677 88 5 0 chr5 109776679 109776895 -93308637 + AluY SINE Alu 66 282 -29 31 26 0 0 chr5 109777391 109777429 -93308103 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 109777791 109777821 -93307711 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 109777927 109777949 -93307583 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 109778003 109778032 -93307500 + AT_rich Low_complexity Low_complexity 1 29 0 2176 82 10 10 chr5 109779885 109780178 -93305354 - AluY SINE Alu -18 293 1 22 0 0 0 chr5 109782194 109782216 -93303316 + AT_rich Low_complexity Low_complexity 1 22 0 294 194 0 0 chr5 109782500 109782567 -93302965 + (CA)n Simple_repeat Simple_repeat 1 67 0 396 111 0 0 chr5 109782665 109782728 -93302804 + (CA)n Simple_repeat Simple_repeat 1 63 0 2136 176 39 7 chr5 109783610 109784025 -93301507 - MSTA LTR MaLR 0 428 1 4358 182 1 8 chr5 109784025 109784795 -93300737 - MSTA-int LTR MaLR 0 1580 816 2149 138 46 42 chr5 109784796 109785213 -93300319 - MSTA LTR MaLR -11 417 1 226 260 40 32 chr5 109785404 109785569 -93299963 + T-rich Low_complexity Low_complexity 1 166 0 34 55 0 0 chr5 109786403 109786458 -93299074 + AT_rich Low_complexity Low_complexity 1 55 0 605 359 121 12 chr5 109786462 109786891 -93298641 + L2 LINE L2 2838 3313 0 26 0 0 0 chr5 109786986 109787012 -93298520 + AT_rich Low_complexity Low_complexity 1 26 0 229 191 15 29 chr5 109787177 109787245 -93298287 + A-rich Low_complexity Low_complexity 2 68 0 757 198 6 6 chr5 109787589 109787751 -93297781 - L1P LINE L1 -1013 5133 4972 634 114 0 0 chr5 109787753 109787841 -93297691 + HUERS-P2 LTR ERV1 2997 3084 -4 597 161 0 18 chr5 109787844 109787956 -93297576 + LTR1 LTR ERV1 1 110 -675 498 244 65 16 chr5 109788183 109788444 -93297088 + L1MA10 LINE L1 5894 6334 0 220 235 0 51 chr5 109788453 109788551 -93296981 + A-rich Low_complexity Low_complexity 2 94 0 1215 252 14 39 chr5 109789076 109789492 -93296040 - L1MDa LINE L1 -4501 2039 1634 198 330 57 45 chr5 109790461 109790549 -93294983 - L2 LINE L2 -2 3311 3223 288 205 39 0 chr5 109790949 109791027 -93294505 - LTR37A LTR ERV1 -19 407 327 6232 209 46 78 chr5 109791088 109792900 -93292632 - MER52A LTR ERV1 0 1755 1 889 236 0 0 chr5 109793065 109793243 -93292289 - AluJb SINE Alu -1 311 134 640 234 159 4 chr5 109793243 109793470 -93292062 - LTR37B LTR ERV1 -4 464 203 2634 16 3 3 chr5 109794125 109794436 -93291096 - L1PA3 LINE L1 0 6155 5845 2772 11 0 3 chr5 109794436 109794937 -93290595 + L1P1 LINE L1 5079 5578 -577 1974 85 99 0 chr5 109796183 109796465 -93289067 - AluY SINE Alu -1 310 1 2023 119 7 3 chr5 109798612 109798906 -93286626 + AluSc SINE Alu 1 295 -14 403 255 35 0 chr5 109798921 109799062 -93286470 + L1MEc LINE L1 1864 2009 -4387 262 302 31 10 chr5 109799061 109799157 -93286375 + L1M4 LINE L1 4015 4112 -2034 * 1903 191 65 31 chr5 109799184 109799598 -93285934 - MSTA LTR MaLR 0 428 1 306 335 159 26 chr5 109799938 109800165 -93285367 + L1MEd LINE L1 417 673 -5446 27 49 0 0 chr5 109801055 109801096 -93284436 + AT_rich Low_complexity Low_complexity 1 41 0 4567 177 76 20 chr5 109801379 109802465 -93283067 - L1MC1 LINE L1 0 6333 5188 1093 241 15 33 chr5 109802815 109803085 -93282447 - MLT1B LTR MaLR -125 265 1 423 352 59 18 chr5 109803162 109803544 -93281988 - HERV16 LTR ERVL -1530 3629 3144 482 129 12 0 chr5 109803821 109803906 -93281626 - L1PA16 LINE L1 -9 6157 6072 384 136 0 12 chr5 109804825 109804906 -93280626 - L1M2 LINE L1 -860 5431 5352 3214 146 33 2 chr5 109804927 109805510 -93280022 - L1MA4 LINE L1 -4 6296 5696 1663 152 37 0 chr5 109805535 109805832 -93279700 + L1M1 LINE L1 5254 5561 -739 404 326 103 29 chr5 109806301 109806785 -93278747 - Tigger8 DNA MER2_type -110 556 37 27 29 0 0 chr5 109806991 109807025 -93278507 + AT_rich Low_complexity Low_complexity 1 34 0 243 217 0 0 chr5 109807754 109807814 -93277718 + (TA)n Simple_repeat Simple_repeat 1 60 0 2016 83 3 45 chr5 109808283 109808595 -93276937 + AluSg SINE Alu 2 300 -10 375 340 91 26 chr5 109808717 109808982 -93276550 + L2 LINE L2 3027 3308 -5 614 98 0 0 chr5 109809123 109809215 -93276317 - L1PA6 LINE L1 -1 6153 6062 1033 253 53 24 chr5 109810935 109811315 -93274217 - L1ME3 LINE L1 -94 6068 5678 643 260 61 11 chr5 109811347 109811528 -93274004 + MIR SINE MIR 2 191 -71 8637 158 13 34 chr5 109812658 109814237 -93271295 - Tigger2 DNA MER2_type -14 2704 1159 1369 223 40 38 chr5 109814345 109814740 -93270792 - Tigger2 DNA MER2_type -2322 396 1 1180 191 122 7 chr5 109815877 109816171 -93269361 + L1MC/D LINE L1 5282 5609 -735 497 124 0 11 chr5 109816428 109816517 -93269015 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 280 219 47 0 chr5 109816661 109816725 -93268807 - L1MA1 LINE L1 -1 6301 6235 643 325 41 19 chr5 109816725 109817137 -93268395 - L1ME3 LINE L1 -2071 5737 5317 242 260 0 0 chr5 109817767 109817817 -93267715 - L2 LINE L2 -1 3271 3222 * 263 192 244 26 chr5 109817815 109817893 -93267639 - MIR SINE MIR -60 148 54 227 232 0 0 chr5 109818287 109818343 -93267189 + L1MC4 LINE L1 6647 6702 -1340 207 0 0 0 chr5 109818362 109818385 -93267147 + (GA)n Simple_repeat Simple_repeat 2 24 0 26 98 0 0 chr5 109818892 109818974 -93266558 + AT_rich Low_complexity Low_complexity 1 82 0 436 86 0 0 chr5 109819623 109819681 -93265851 - L1PA3 LINE L1 -2900 3246 3189 17382 39 0 2 chr5 109819681 109822600 -93262932 + L1PA3 LINE L1 3240 6154 -1 1260 156 11 151 chr5 109823181 109823539 -93261993 - Tigger2 DNA MER2_type 0 2718 2411 300 260 60 0 chr5 109823639 109823739 -93261793 + L1MD3 LINE L1 6789 6894 -1101 691 239 21 16 chr5 109823744 109823932 -93261600 + L1MD3 LINE L1 7092 7280 -715 431 212 0 12 chr5 109823964 109824049 -93261483 + MLT1F1 LTR MaLR 42 125 -442 1417 209 49 136 chr5 109824049 109824235 -93261297 + L1MD3 LINE L1 7404 7605 -390 1786 179 0 0 chr5 109824235 109824543 -93260989 + AluJb SINE Alu 1 308 -4 1417 209 49 136 chr5 109824543 109824994 -93260538 + L1MD3 LINE L1 7605 7985 -10 21 0 0 0 chr5 109825071 109825092 -93260440 + AT_rich Low_complexity Low_complexity 1 21 0 1893 269 26 17 chr5 109826864 109827514 -93258018 - L1MEc LINE L1 -3229 3712 3057 932 291 80 12 chr5 109827533 109828062 -93257470 - L1MEc LINE L1 -3856 3085 2560 286 278 66 73 chr5 109828069 109828371 -93257161 - L1MEc LINE L1 -6103 320 21 570 15 0 0 chr5 109828510 109828577 -93256955 + (CA)n Simple_repeat Simple_repeat 2 68 0 1740 138 46 87 chr5 109828675 109829066 -93256466 - THE1C LTR MaLR 0 375 1 257 259 0 62 chr5 109829438 109829519 -93256013 - MLT1L LTR MaLR -304 311 236 21 0 0 0 chr5 109829881 109829902 -93255630 + AT_rich Low_complexity Low_complexity 1 21 0 813 303 92 20 chr5 109830836 109831236 -93254296 - ERVL LTR ERVL -709 5055 4627 1822 323 53 26 chr5 109831315 109832420 -93253112 - ERVL LTR ERVL -1092 4393 3236 1290 298 95 29 chr5 109832782 109833369 -93252163 + MLT1E2 LTR MaLR 1 626 0 298 295 26 73 chr5 109833413 109833474 -93252058 - MLT1H LTR MaLR -280 269 207 1082 203 17 17 chr5 109833474 109833710 -93251822 - MER46A DNA MER2_type 0 236 1 298 295 26 73 chr5 109833710 109833882 -93251650 - MLT1H LTR MaLR -342 207 47 1257 201 8 25 chr5 109834163 109834407 -93251125 - MER74C LTR ERVL 0 460 221 1332 220 25 52 chr5 109834481 109834849 -93250683 + MLT1A1 LTR MaLR 8 365 0 551 338 35 56 chr5 109835436 109835862 -93249670 + MLT1K LTR MaLR 143 559 -29 24 32 0 0 chr5 109836433 109836464 -93249068 + AT_rich Low_complexity Low_complexity 1 31 0 1559 194 21 4 chr5 109836845 109837124 -93248408 - AluJo SINE Alu -26 286 3 4734 166 30 7 chr5 109838355 109839218 -93246314 - Tigger2 DNA MER2_type -276 2442 1560 1092 162 86 0 chr5 109839217 109839451 -93246081 - Tigger2 DNA MER2_type -2464 254 1 * 342 282 52 60 chr5 109839896 109840148 -93245384 + L1ME4a LINE L1 5639 5888 -233 27 0 0 0 chr5 109840273 109840300 -93245232 + AT_rich Low_complexity Low_complexity 1 27 0 401 248 55 9 chr5 109840333 109840442 -93245090 + LTR50 LTR ERVL 1 114 -681 544 256 137 19 chr5 109840519 109840781 -93244751 + LTR50 LTR ERVL 503 795 0 243 308 68 45 chr5 109841603 109841736 -93243796 - L2 LINE L2 0 3272 3137 258 286 13 13 chr5 109841766 109841843 -93243689 + MLT2F LTR ERVL 34 110 -553 746 293 96 18 chr5 109841847 109842410 -93243122 + L1M4 LINE L1 3962 4568 -1578 865 223 135 9 chr5 109842490 109842569 -93242963 + AluJo SINE Alu 35 103 -209 306 67 0 0 chr5 109842569 109842614 -93242918 + (CA)n Simple_repeat Simple_repeat 2 46 0 865 223 135 9 chr5 109842614 109842763 -93242769 + AluJo SINE Alu 103 292 -20 239 288 99 18 chr5 109842925 109843036 -93242496 + MIR SINE MIR 126 245 -17 24 77 0 0 chr5 109844811 109844863 -93240669 + AT_rich Low_complexity Low_complexity 1 52 0 352 239 0 0 chr5 109845514 109845585 -93239947 + Tigger2 DNA MER2_type 4 74 -2644 * 582 256 8 8 chr5 109845579 109845704 -93239828 - MER8 DNA MER2_type -109 130 6 287 353 7 65 chr5 109847155 109847308 -93238224 - MIR SINE MIR -101 161 18 184 282 136 0 chr5 109847338 109847448 -93238084 - MIR SINE MIR -41 221 97 238 188 16 16 chr5 109847731 109847795 -93237737 - L1MD3 LINE L1 -129 7866 7803 1572 191 27 3 chr5 109848605 109848935 -93236597 - L1MA3 LINE L1 -2 6303 5966 562 221 50 43 chr5 109849132 109849272 -93236260 - MER92C LTR ERV1 -3 551 411 599 215 0 30 chr5 109849432 109849567 -93235965 - MER92C LTR ERV1 -169 385 255 2059 111 95 50 chr5 109849575 109849997 -93235535 + MSTA LTR MaLR 1 375 -8 2251 63 0 10 chr5 109851340 109851641 -93233891 - AluY SINE Alu -13 298 1 517 143 98 0 chr5 109853338 109853450 -93232082 + Charlie5 DNA MER1_type 2 124 -2488 1363 198 99 0 chr5 109853452 109853806 -93231726 + Charlie5 DNA MER1_type 2236 2624 0 334 294 68 68 chr5 109854105 109854415 -93231117 + L1MC4a LINE L1 5593 5902 -1906 24 32 0 0 chr5 109854442 109854473 -93231059 + AT_rich Low_complexity Low_complexity 1 31 0 27 81 0 0 chr5 109854571 109854633 -93230899 + AT_rich Low_complexity Low_complexity 1 62 0 28 0 0 0 chr5 109854679 109854707 -93230825 + AT_rich Low_complexity Low_complexity 1 28 0 712 181 0 15 chr5 109854937 109855070 -93230462 + FLAM_C SINE Alu 3 133 0 26 0 0 0 chr5 109855518 109855544 -93229988 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr5 109855708 109855745 -93229787 + AT_rich Low_complexity Low_complexity 1 37 0 1724 19 14 5 chr5 109856952 109857165 -93228367 + L1PA2 LINE L1 5939 6153 -2 3126 32 3 0 chr5 109857165 109857540 -93227992 + L1PA3 LINE L1 5770 6147 -8 830 252 141 28 chr5 109857690 109857919 -93227613 + MER58B DNA MER1_type 19 289 -2131 2423 124 8 3 chr5 109857919 109858281 -93227251 - THE1B LTR MaLR 0 364 1 830 252 141 28 chr5 109858281 109858341 -93227191 + MER58B DNA MER1_type 289 341 0 2148 125 0 0 chr5 109858440 109858736 -93226796 - AluSc SINE Alu -13 296 1 508 284 131 36 chr5 109858982 109859317 -93226215 - L1ME3A LINE L1 -22 6148 5782 268 299 51 17 chr5 109859394 109859511 -93226021 - L1ME3A LINE L1 -524 5646 5526 263 174 22 0 chr5 109859512 109859558 -93225974 - AluS SINE Alu -242 61 15 2713 264 76 23 chr5 109859563 109860511 -93225021 - L1MCb LINE L1 -5047 998 1 24 53 0 0 chr5 109861398 109861436 -93224096 + AT_rich Low_complexity Low_complexity 1 38 0 30 0 0 0 chr5 109861664 109861694 -93223838 + AT_rich Low_complexity Low_complexity 1 30 0 388 279 112 84 chr5 109861875 109862409 -93223123 + MLT1H LTR MaLR 1 549 0 3397 235 54 15 chr5 109862431 109863966 -93221566 - L1MB7 LINE L1 0 6184 4593 2121 197 11 11 chr5 109863950 109864402 -93221130 - L1P LINE L1 -853 5293 4842 * 3333 131 20 0 chr5 109864399 109865094 -93220438 - L1ME3A LINE L1 -220 5950 5225 207 0 0 0 chr5 109865681 109865704 -93219828 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 390 206 0 82 chr5 109866017 109866114 -93219418 - MSTD LTR MaLR -73 323 235 261 0 0 0 chr5 109866162 109866191 -93219341 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2287 49 3 29 chr5 109866291 109866599 -93218933 - AluY SINE Alu -11 300 1 2797 157 10 10 chr5 109866599 109867082 -93218450 - L1PA16 LINE L1 -126 6040 5558 502 247 57 59 chr5 109867096 109867475 -93218057 - L1MDb LINE L1 -5134 1406 1021 266 326 43 28 chr5 109868326 109868467 -93217065 - L1MDb LINE L1 -5926 604 462 31 0 0 0 chr5 109868798 109868829 -93216703 + AT_rich Low_complexity Low_complexity 1 31 0 320 299 0 28 chr5 109868988 109869095 -93216437 - MER63 DNA MER1_type -277 784 681 4536 51 18 2 chr5 109869288 109869893 -93215639 + L1PA3 LINE L1 5541 6155 0 25 0 0 0 chr5 109869981 109870006 -93215526 + AT_rich Low_complexity Low_complexity 1 25 0 1390 219 13 54 chr5 109870592 109870980 -93214552 - L1 LINE L1 -2029 4117 3746 * 4504 204 31 37 chr5 109870976 109873156 -93212376 + L1MA10 LINE L1 4161 6329 -5 422 279 9 0 chr5 109873280 109873391 -93212141 + MIR SINE MIR 65 176 -86 5372 22 0 0 chr5 109875322 109876362 -93209170 + L1P1 LINE L1 4748 5787 -368 41728 33 32 1 chr5 109876364 109882147 -93203385 + L1PA2 LINE L1 8 5975 -180 24 0 0 0 chr5 109882262 109882286 -93203246 + AT_rich Low_complexity Low_complexity 1 24 0 203 313 55 55 chr5 109883843 109883971 -93201561 - L3 LINE CR1 -157 1420 1293 353 267 0 0 chr5 109884552 109884627 -93200905 - L2 LINE L2 -11 3302 3228 466 271 36 5 chr5 109884766 109884987 -93200545 + L1ME3 LINE L1 4367 4594 -1552 709 191 27 21 chr5 109885291 109885479 -93200053 + MER53 DNA DNA 1 189 0 889 266 153 26 chr5 109885480 109885949 -93199583 + L1ME3 LINE L1 5634 6162 0 21 89 0 0 chr5 109886094 109886150 -93199382 + AT_rich Low_complexity Low_complexity 1 56 0 345 198 37 0 chr5 109886369 109886450 -93199082 - L1 LINE L1 -1659 5906 5823 4828 184 43 21 chr5 109886455 109888122 -93197410 - L1 LINE L1 -2814 4751 3043 2102 314 66 40 chr5 109888121 109889608 -93195924 - L1PA12 LINE L1 -5501 2080 546 * 1307 271 32 15 chr5 109889657 109890063 -93195469 - L1PA12 LINE L1 -7166 415 3 2723 249 52 57 chr5 109890091 109891374 -93194158 - L1M4 LINE L1 -1896 4250 2974 4778 47 3 0 chr5 109891444 109892025 -93193507 - L1PA5 LINE L1 -2 6152 5570 3122 36 1 0 chr5 109892025 109892583 -93192949 + L1PA5 LINE L1 5008 5566 -588 605 272 56 0 chr5 109893440 109893620 -93191912 - MER63A DNA MER1_type -20 190 1 2833 140 5 5 chr5 109894450 109894899 -93190633 - L1PA16 LINE L1 -9 6157 5709 3515 263 143 47 chr5 109895103 109896258 -93189274 + L1MC3 LINE L1 5708 6751 -1034 198 0 0 0 chr5 109896258 109896280 -93189252 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3515 263 143 47 chr5 109896280 109896402 -93189130 + L1MC3 LINE L1 6751 6860 -925 370 158 0 0 chr5 109896402 109896459 -93189073 + MLT1F1 LTR MaLR 46 102 -465 3515 263 143 47 chr5 109896459 109897005 -93188527 + L1MC3 LINE L1 6860 7768 -17 324 96 78 0 chr5 109898234 109898349 -93187183 + (TA)n Simple_repeat Simple_repeat 1 124 0 24 0 0 0 chr5 109898430 109898454 -93187078 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 109898480 109898509 -93187023 + AT_rich Low_complexity Low_complexity 1 29 0 3551 211 45 57 chr5 109898581 109899557 -93185975 + MER45B DNA AcHobo 73 1036 -4 471 307 61 6 chr5 109899636 109899799 -93185733 + MIR SINE MIR 1 172 -90 209 401 30 0 chr5 109900208 109900340 -93185192 + L3 LINE CR1 1382 1517 -60 3705 165 11 19 chr5 109900888 109901633 -93183899 - L1MA4 LINE L1 -1118 5028 4290 * 4276 184 83 32 chr5 109901624 109902245 -93183287 + L1MA4 LINE L1 5020 5608 -692 2419 93 0 0 chr5 109902245 109902556 -93182976 + AluY SINE Alu 1 311 0 4276 184 83 32 chr5 109902556 109902888 -93182644 + L1MA4 LINE L1 5608 5922 -378 1727 161 91 24 chr5 109902888 109903229 -93182303 + THE1B LTR MaLR 1 364 0 11145 95 22 2 chr5 109903229 109904778 -93180754 + THE1B-int LTR MaLR 1 1580 0 1814 149 92 21 chr5 109904778 109905114 -93180418 + THE1B LTR MaLR 1 360 -4 4276 184 83 32 chr5 109905114 109905382 -93180150 + L1MA4 LINE L1 5921 6293 -7 431 51 0 11 chr5 109906199 109906264 -93179268 - MLT2A1 LTR ERVL 0 444 392 213 182 0 0 chr5 109906264 109906319 -93179213 + (TA)n Simple_repeat Simple_repeat 2 56 0 2704 98 11 0 chr5 109906319 109906685 -93178847 - MLT2A1 LTR ERVL -40 404 35 399 73 0 0 chr5 109906686 109906741 -93178791 - HERVL LTR ERVL -838 4816 4762 24 32 0 0 chr5 109906755 109906786 -93178746 + AT_rich Low_complexity Low_complexity 1 31 0 30 58 0 14 chr5 109906902 109906940 -93178592 + AT_rich Low_complexity Low_complexity 1 39 -29 2151 111 3 0 chr5 109906940 109907228 -93178304 - AluSp SINE Alu -24 289 1 30 58 0 14 chr5 109907228 109907258 -93178274 + AT_rich Low_complexity Low_complexity 39 68 0 2596 208 18 55 chr5 109907895 109908463 -93177069 - MLT2B3 LTR ERVL 0 554 8 1368 175 100 63 chr5 109908613 109908962 -93176570 + MLT1A1 LTR MaLR 4 365 0 22 0 0 0 chr5 109910205 109910227 -93175305 + AT_rich Low_complexity Low_complexity 1 22 0 264 196 4 0 chr5 109910782 109910851 -93174681 - Alu SINE Alu -3 299 238 21 36 0 0 chr5 109911571 109911599 -93173933 + AT_rich Low_complexity Low_complexity 1 28 0 900 296 56 32 chr5 109911759 109912256 -93173276 - L1M4 LINE L1 -1943 4203 3695 255 167 0 0 chr5 109912752 109912788 -93172744 + L1MEd LINE L1 594 629 -5490 434 113 0 0 chr5 109913332 109913394 -93172138 + MSTB2 LTR MaLR 3 64 -393 1847 168 126 11 chr5 109913397 109913777 -93171755 + MSTA LTR MaLR 5 428 0 8330 159 8 72 chr5 109913779 109914331 -93171201 + MSTA-int LTR MaLR 3 589 -991 183 42 0 0 chr5 109914331 109914355 -93171177 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8330 159 8 72 chr5 109914355 109915488 -93170044 + MSTA-int LTR MaLR 589 1580 0 593 167 246 36 chr5 109915488 109915626 -93169906 + MSTA LTR MaLR 1 167 -197 648 160 160 0 chr5 109915628 109915759 -93169773 + MSTA LTR MaLR 277 428 0 1544 220 103 19 chr5 109915759 109916127 -93169405 + MSTB2 LTR MaLR 59 457 0 304 267 102 59 chr5 109916322 109916890 -93168642 + L1ME3A LINE L1 5530 6165 -5 1259 222 7 42 chr5 109916954 109917260 -93168272 + AluJo SINE Alu 3 297 -15 21 36 0 0 chr5 109917373 109917401 -93168131 + AT_rich Low_complexity Low_complexity 1 28 0 4435 180 75 16 chr5 109917437 109918433 -93167099 + L1MC1 LINE L1 5273 6322 -11 271 194 119 0 chr5 109919119 109919186 -93166346 + MER21A LTR ERV1 179 253 -678 2726 164 48 40 chr5 109919209 109919734 -93165798 + MER21A LTR ERV1 384 915 -16 2395 142 5 3 chr5 109919734 109920108 -93165424 - THE1C LTR MaLR 0 375 1 2726 164 48 40 chr5 109920108 109920126 -93165406 + MER21A LTR ERV1 915 931 0 666 234 135 42 chr5 109920506 109920921 -93164611 - MLT1D LTR MaLR 0 467 23 322 302 29 110 chr5 109921033 109921341 -93164191 - L1ME LINE L1 -5603 467 185 208 259 0 26 chr5 109921341 109921457 -93164075 + GA-rich Low_complexity Low_complexity 1 113 0 250 315 27 9 chr5 109921457 109921568 -93163964 - L1ME LINE L1 -5868 202 90 21 0 0 0 chr5 109922955 109922976 -93162556 + AT_rich Low_complexity Low_complexity 1 21 0 47 74 0 8 chr5 109923388 109923473 -93162059 + AT_rich Low_complexity Low_complexity 1 86 -34 2239 73 0 10 chr5 109923473 109923761 -93161771 + AluY SINE Alu 1 285 -26 47 74 0 8 chr5 109923761 109923796 -93161736 + AT_rich Low_complexity Low_complexity 86 120 0 1162 258 35 0 chr5 109923861 109924117 -93161415 + Tigger7 DNA MER2_type 3 267 -466 555 170 10 40 chr5 109924116 109924216 -93161316 + Tigger7 DNA MER2_type 2490 2586 -1 * 368 281 55 37 chr5 109924556 109924720 -93160812 + MLT1E LTR MaLR 72 238 -355 1089 143 63 0 chr5 109924745 109924780 -93160752 + AluSg/x SINE Alu 87 118 -194 337 65 16 16 chr5 109924780 109924842 -93160690 + (CAAAA)n Simple_repeat Simple_repeat 5 66 0 1089 143 63 0 chr5 109924842 109924995 -93160537 + AluSg/x SINE Alu 118 287 -25 2215 65 48 0 chr5 109925119 109925411 -93160121 - AluY SINE Alu -5 306 1 21 36 0 0 chr5 109925547 109925575 -93159957 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 109926682 109926712 -93158820 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 109927057 109927085 -93158447 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 109927287 109927308 -93158224 + AT_rich Low_complexity Low_complexity 1 21 0 267 233 20 0 chr5 109927440 109927547 -93157985 + AluJ/FRAM SINE Alu 225 323 0 858 223 91 18 chr5 109927791 109928011 -93157521 - Charlie1a DNA MER1_type -1215 240 5 23 33 0 0 chr5 109928223 109928253 -93157279 + AT_rich Low_complexity Low_complexity 1 30 0 539 280 40 53 chr5 109928322 109928547 -93156985 + MIR SINE MIR 14 235 -27 2513 190 65 56 chr5 109929503 109930149 -93155383 - MER67C LTR ERV1 0 710 59 300 203 0 14 chr5 109931726 109931795 -93153737 - L1MC5 LINE L1 -198 7763 7696 215 358 101 0 chr5 109932912 109933021 -93152511 + L2 LINE L2 3190 3309 -4 22 35 0 0 chr5 109933957 109933986 -93151546 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 109934159 109934180 -93151352 + AT_rich Low_complexity Low_complexity 1 21 0 3694 135 132 1 chr5 109934180 109934847 -93150685 - L1PA15 LINE L1 -7 6158 5405 726 192 32 5 chr5 109934861 109935015 -93150517 - MER61D LTR ERV1 -26 475 338 1358 176 4 7 chr5 109935490 109935762 -93149770 - L1PA15 LINE L1 -746 5400 5130 308 134 30 15 chr5 109935759 109935826 -93149706 - L1 LINE L1 -2385 3761 3694 * 344 294 209 7 chr5 109935911 109936064 -93149468 - MIR SINE MIR -69 193 10 21 36 0 0 chr5 109937932 109937960 -93147572 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 109937983 109938009 -93147523 + AT_rich Low_complexity Low_complexity 1 26 0 543 83 21 10 chr5 109938741 109938837 -93146695 + (GAAA)n Simple_repeat Simple_repeat 2 98 0 23 0 0 0 chr5 109939194 109939217 -93146315 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr5 109939698 109939728 -93145804 + (A)n Simple_repeat Simple_repeat 1 30 0 221 57 29 0 chr5 109939975 109940010 -93145522 + (TC)n Simple_repeat Simple_repeat 1 36 0 359 323 132 19 chr5 109940174 109940431 -93145101 + L1MEd LINE L1 1354 1639 -4891 28702 126 27 58 chr5 109940436 109946722 -93138810 + L1PA7 LINE L1 12 6106 -48 312 292 42 33 chr5 109946739 109946859 -93138673 + L1MEd LINE L1 1604 1724 -4816 198 71 0 0 chr5 109947120 109947148 -93138384 + (CA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr5 109947978 109948000 -93137532 + AT_rich Low_complexity Low_complexity 1 22 0 1967 126 65 0 chr5 109948995 109949320 -93136212 - L1PA16 LINE L1 0 6166 5821 198 71 0 0 chr5 109949372 109949400 -93136132 + (TG)n Simple_repeat Simple_repeat 1 28 0 1527 40 20 10 chr5 109949596 109949794 -93135738 - L1PA3 LINE L1 -1 6154 5955 22 0 0 0 chr5 109949882 109949904 -93135628 + AT_rich Low_complexity Low_complexity 1 22 0 225 364 23 8 chr5 109949926 109950055 -93135477 - L1MC4 LINE L1 -612 7430 7300 23 0 0 0 chr5 109950616 109950639 -93134893 + AT_rich Low_complexity Low_complexity 1 23 0 460 231 15 22 chr5 109952131 109952265 -93133267 - L1 LINE L1 -801 5345 5213 3392 188 57 7 chr5 109952283 109953130 -93132402 + L1MA4A LINE L1 3324 5273 -873 3361 172 79 18 chr5 109953141 109953846 -93131686 + L1MA4A LINE L1 5551 6298 -5 23 54 0 0 chr5 109953965 109954002 -93131530 + AT_rich Low_complexity Low_complexity 1 37 0 455 0 18 0 chr5 109954930 109954985 -93130547 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 1731 158 4 0 chr5 109954990 109955262 -93130270 - AluSg SINE Alu -37 273 1 1912 271 52 29 chr5 109955418 109956030 -93129502 + L1MA8 LINE L1 466 1091 -6398 3885 223 80 83 chr5 109956032 109958528 -93127004 + L1MA8 LINE L1 1970 4416 -3149 2052 199 19 21 chr5 109958528 109958955 -93126577 + MSTC LTR MaLR 3 428 0 3885 223 80 83 chr5 109958955 109959739 -93125793 + L1MA8 LINE L1 4416 5201 -2364 2310 201 8 12 chr5 109959744 109960257 -93125275 - L1MA4 LINE L1 -1103 5043 4533 3860 180 109 53 chr5 109960258 109960774 -93124758 + L1MA4 LINE L1 5048 5534 -766 2818 13 0 0 chr5 109960774 109961089 -93124443 + AluYb8 SINE Alu 1 315 -3 3860 180 109 53 chr5 109961089 109961769 -93123763 + L1MA4 LINE L1 5534 6291 -9 6102 195 31 49 chr5 109961794 109964441 -93121091 + L1MA8 LINE L1 5195 7709 -1 21 36 0 0 chr5 109964487 109964515 -93121017 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 109964944 109964967 -93120565 + AT_rich Low_complexity Low_complexity 1 23 0 201 361 49 16 chr5 109966952 109967074 -93118458 + MER5B DNA MER1_type 12 137 -41 1305 183 113 82 chr5 109967520 109967733 -93117799 + MSTA LTR MaLR 1 206 -222 258 32 0 0 chr5 109967733 109967764 -93117768 + (TC)n Simple_repeat Simple_repeat 1 31 0 1305 183 113 82 chr5 109967764 109967965 -93117567 + MSTA LTR MaLR 206 428 0 7436 156 33 68 chr5 109967969 109969603 -93115929 + MSTA-int LTR MaLR 5 1580 0 1180 193 210 10 chr5 109969610 109969910 -93115622 + MSTA LTR MaLR 8 367 -61 2226 101 0 3 chr5 109970402 109970699 -93114833 - AluSq SINE Alu -17 296 1 243 380 62 16 chr5 109970761 109971019 -93114513 + L2 LINE L2 2200 2469 -845 200 430 0 7 chr5 109971247 109971382 -93114150 + L2 LINE L2 2946 3079 -193 1612 241 57 24 chr5 109971635 109972145 -93113387 + MER90 LTR ERV1 7 533 -81 264 291 35 12 chr5 109972364 109972450 -93113082 - MIR SINE MIR -51 211 124 21 0 0 0 chr5 109973176 109973197 -93112335 + AT_rich Low_complexity Low_complexity 1 21 0 835 211 153 60 chr5 109973439 109973845 -93111687 + MER39 LTR ERV1 20 593 -114 237 258 56 34 chr5 109973849 109973938 -93111594 + MER34C LTR ERV1 495 585 0 411 306 59 28 chr5 109974970 109975362 -93110170 + L1M4 LINE L1 2754 3157 -2989 183 159 16 32 chr5 109975632 109975695 -93109837 + (TA)n Simple_repeat Simple_repeat 2 63 0 294 202 45 39 chr5 109975768 109975946 -93109586 + (TA)n Simple_repeat Simple_repeat 1 179 0 688 186 31 12 chr5 109977048 109977209 -93108323 + L1MA9 LINE L1 5938 6101 -211 28 48 0 0 chr5 109977209 109977251 -93108281 + AT_rich Low_complexity Low_complexity 1 42 0 1119 146 17 52 chr5 109977251 109977484 -93108048 + L1MA9 LINE L1 6088 6312 0 3283 208 31 68 chr5 109977581 109978604 -93106928 - L1 LINE L1 -758 5388 4404 996 242 34 6 chr5 109978578 109978905 -93106627 - L1 LINE L1 -1658 4488 4153 * 6787 156 18 13 chr5 109980247 109981458 -93104074 - HSMAR2 DNA Mariner -7 1295 79 23 33 0 0 chr5 109981458 109981488 -93104044 + AT_rich Low_complexity Low_complexity 1 30 0 353 174 70 0 chr5 109981488 109981574 -93103958 - HSMAR2 DNA Mariner -1197 105 14 27 0 0 0 chr5 109982269 109982296 -93103236 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 109983183 109983204 -93102328 + AT_rich Low_complexity Low_complexity 1 21 0 1426 216 18 42 chr5 109983392 109983777 -93101755 + L1MA9 LINE L1 5705 6080 -232 2009 88 0 0 chr5 109983791 109984065 -93101467 - L1PA14 LINE L1 -1 6160 5887 283 336 20 20 chr5 109984413 109984559 -93100973 + MIR SINE MIR 61 206 -56 243 0 0 0 chr5 109985006 109985033 -93100499 + (CA)n Simple_repeat Simple_repeat 2 28 0 399 21 0 0 chr5 109985156 109985204 -93100328 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 0 0 0 chr5 109985480 109985507 -93100025 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 109986067 109986090 -93099442 + AT_rich Low_complexity Low_complexity 1 23 0 757 204 28 11 chr5 109986259 109986435 -93099097 - L1MD3 LINE L1 -86 7909 7731 23 0 0 0 chr5 109986678 109986701 -93098831 + AT_rich Low_complexity Low_complexity 1 23 0 336 111 0 0 chr5 109986828 109986882 -93098650 + (TG)n Simple_repeat Simple_repeat 1 54 0 561 324 91 29 chr5 109987421 109987761 -93097771 + ERVL LTR ERVL 4536 4896 -868 1538 206 76 33 chr5 109987924 109988321 -93097211 + MLT1D LTR MaLR 92 505 0 225 256 58 0 chr5 109989843 109989929 -93095603 + L1MC4 LINE L1 6613 6703 -1339 318 269 168 30 chr5 109990471 109990638 -93094894 + L1ME1 LINE L1 5959 6148 -18 23 33 0 0 chr5 109991508 109991538 -93093994 + AT_rich Low_complexity Low_complexity 1 30 0 731 169 17 0 chr5 109991824 109991942 -93093590 + FRAM SINE Alu 1 119 -57 1537 155 57 65 chr5 109991947 109992314 -93093218 + THE1B LTR MaLR 1 364 0 10545 110 3 51 chr5 109992314 109993175 -93092357 + THE1B-int LTR MaLR 1 748 -832 18427 33 0 0 chr5 109993175 109996203 -93089329 + L1PA3 LINE L1 3168 6195 0 10545 110 3 51 chr5 109996203 109996999 -93088533 + THE1B-int LTR MaLR 748 1580 0 1897 154 27 41 chr5 109996999 109997368 -93088164 + THE1B LTR MaLR 1 364 0 1566 213 9 0 chr5 109997674 109997998 -93087534 + MER47A DNA MER2_type 7 333 -33 4756 199 99 2 chr5 109997998 109998963 -93086569 - LTR28 LTR ERV1 0 1020 21 462 248 18 0 chr5 109999781 109999890 -93085642 + MER20 DNA MER1_type 108 218 -1 823 187 42 12 chr5 110000299 110000465 -93085067 - FRAM SINE Alu -4 172 2 466 294 128 74 chr5 110000512 110000808 -93084724 + LTR16C LTR ERVL 180 491 0 1037 198 20 15 chr5 110002271 110002473 -93083059 + AluJb SINE Alu 89 291 -21 22 35 0 0 chr5 110002619 110002648 -93082884 + AT_rich Low_complexity Low_complexity 1 29 0 1411 207 10 33 chr5 110003431 110003730 -93081802 + AluJo SINE Alu 1 292 -20 22 25 0 25 chr5 110003845 110003866 -93081666 + AT_rich Low_complexity Low_complexity 1 22 -17 1742 177 3 0 chr5 110003866 110004165 -93081367 - AluJb SINE Alu 0 312 13 22 25 0 25 chr5 110004165 110004183 -93081349 + AT_rich Low_complexity Low_complexity 22 39 0 1449 297 76 16 chr5 110005226 110005843 -93079689 + L1MEc LINE L1 134 787 -5609 584 313 158 11 chr5 110005883 110006167 -93079365 - L1MEc LINE L1 -6029 367 42 1418 264 66 69 chr5 110006439 110006748 -93078784 + L1MC4 LINE L1 6476 6784 -1258 2230 185 35 30 chr5 110006748 110007207 -93078325 - LOR1b LTR ERV1 0 461 1 1418 264 66 69 chr5 110007207 110007594 -93077938 + L1MC4 LINE L1 6784 7170 -872 264 181 28 28 chr5 110007588 110007660 -93077872 - L1PA14 LINE L1 -1088 5058 4987 * 5338 141 19 2 chr5 110007660 110008713 -93076819 + L1PA14 LINE L1 5089 6159 -2 245 241 46 35 chr5 110008716 110008803 -93076729 + L1MC4a LINE L1 7102 7189 -619 1899 210 153 57 chr5 110008814 110009499 -93076033 + LTR1B LTR ERV1 1 751 -75 736 267 34 23 chr5 110009618 110009884 -93075648 + L1MC4 LINE L1 7290 7558 -484 692 211 8 110 chr5 110009905 110010151 -93075381 + L1MC4 LINE L1 7782 8002 -40 35 49 0 37 chr5 110010159 110010241 -93075291 + AT_rich Low_complexity Low_complexity 1 79 0 34 0 0 0 chr5 110010623 110010657 -93074875 + AT_rich Low_complexity Low_complexity 1 34 0 280 392 64 27 chr5 110010662 110010958 -93074574 + L2 LINE L2 2825 3131 -182 26 0 0 0 chr5 110011172 110011198 -93074334 + AT_rich Low_complexity Low_complexity 1 26 0 261 128 0 0 chr5 110011446 110011493 -93074039 + (T)n Simple_repeat Simple_repeat 1 47 0 12137 23 0 7 chr5 110011497 110013709 -93071823 - L1PA2 LINE L1 -1 6154 3953 307 93 0 0 chr5 110013709 110013752 -93071780 + L1PA2 LINE L1 3917 3959 -2187 303 28 0 0 chr5 110013985 110014021 -93071511 + (CA)n Simple_repeat Simple_repeat 1 36 0 415 286 48 0 chr5 110016202 110016328 -93069204 + MLT1E1 LTR MaLR 139 270 -384 7989 128 14 3 chr5 110017124 110018293 -93067239 - HSMAR1 DNA Mariner -105 1182 2 256 312 57 51 chr5 110018341 110018498 -93067034 + L2 LINE L2 3147 3304 -9 226 275 0 38 chr5 110018594 110018674 -93066858 + GA-rich Low_complexity Low_complexity 1 77 0 184 146 146 0 chr5 110019079 110019120 -93066412 - L2 LINE L2 -16 3297 3251 272 325 98 8 chr5 110019248 110019371 -93066161 + L2 LINE L2 2594 2727 -587 564 315 79 50 chr5 110019756 110019785 -93065747 - L1MB2 LINE L1 -72 6099 6072 1364 167 6 85 chr5 110019785 110020114 -93065418 - AluJo SINE Alu -5 307 5 564 315 79 50 chr5 110020114 110020156 -93065376 - L1MB2 LINE L1 -99 6072 5700 1472 224 90 57 chr5 110020156 110020727 -93064805 - L1ME2 LINE L1 -148 6018 5452 1915 160 0 0 chr5 110020759 110021066 -93064466 - AluSx SINE Alu -5 307 1 848 260 52 10 chr5 110021066 110021374 -93064158 + L1M4 LINE L1 4604 4924 -1222 2324 269 137 52 chr5 110021383 110021933 -93063599 - L1MEc LINE L1 -2439 3776 3274 2325 62 0 3 chr5 110021933 110022244 -93063288 - AluY SINE Alu 0 311 3 2324 269 137 52 chr5 110022244 110023997 -93061535 - L1MEc LINE L1 -2941 3274 1671 312 48 0 0 chr5 110023997 110024039 -93061493 + (TC)n Simple_repeat Simple_repeat 1 42 0 1549 196 7 25 chr5 110024039 110024324 -93061208 - AluJb SINE Alu -32 280 1 2324 269 137 52 chr5 110024324 110025474 -93060058 - L1MEc LINE L1 -4543 1672 53 261 163 0 0 chr5 110025737 110025786 -93059746 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 2181 108 16 3 chr5 110026181 110026486 -93059046 - AluSg SINE Alu 0 310 2 1449 136 9 0 chr5 110026510 110026731 -93058801 - AluSq SINE Alu -14 299 77 1994 40 28 0 chr5 110026829 110027081 -93058451 + L1PA4 LINE L1 5894 6152 -3 22 0 0 0 chr5 110027469 110027491 -93058041 + AT_rich Low_complexity Low_complexity 1 22 0 2068 197 29 2 chr5 110028263 110028684 -93056848 + MSTB1 LTR MaLR 1 432 0 198 191 0 0 chr5 110029859 110029901 -93055631 + (CA)n Simple_repeat Simple_repeat 2 43 0 2552 170 30 9 chr5 110030364 110030899 -93054633 - L1MA8 LINE L1 -5 6286 5741 22 0 0 0 chr5 110031320 110031342 -93054190 + AT_rich Low_complexity Low_complexity 1 22 0 195 100 0 0 chr5 110031882 110031912 -93053620 + (TAA)n Simple_repeat Simple_repeat 2 31 0 306 370 13 19 chr5 110032398 110032552 -93052980 + L1MDa LINE L1 851 1003 -5369 262 228 62 5 chr5 110032605 110032753 -93052779 + L1MDa LINE L1 1597 1880 -863 21 0 0 0 chr5 110033189 110033210 -93052322 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 110034222 110034245 -93051287 + AT_rich Low_complexity Low_complexity 1 23 0 235 309 108 58 chr5 110034365 110034504 -93051028 + MER5A DNA MER1_type 37 182 -7 203 400 30 7 chr5 110034936 110035071 -93050461 + MIR SINE MIR 57 194 -68 23 33 0 0 chr5 110035629 110035659 -93049873 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 110035765 110035807 -93049725 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr5 110037359 110037397 -93048135 + AT_rich Low_complexity Low_complexity 1 38 0 12888 142 18 16 chr5 110039331 110041471 -93044061 + Tigger1 DNA MER2_type 1 2144 -274 1377 141 53 13 chr5 110041471 110041698 -93043834 - THE1B LTR MaLR 0 364 129 685 154 140 7 chr5 110041705 110041848 -93043684 - LOR1a LTR ERV1 -147 350 189 660 201 22 0 chr5 110041843 110041982 -93043550 - LOR1b LTR ERV1 -319 142 1 * 257 250 0 0 chr5 110042035 110042087 -93043445 - ERVL LTR ERVL -3510 2254 2203 180 141 0 183 chr5 110042087 110042158 -93043374 + L3 LINE CR1 804 861 -716 475 365 30 23 chr5 110042183 110042487 -93043045 - ERVL LTR ERVL -2974 2022 1717 551 248 99 80 chr5 110042632 110042948 -93042584 + Charlie4a DNA MER1_type 2 331 -1630 1958 150 0 0 chr5 110042948 110043241 -93042291 - AluSx SINE Alu -8 304 12 551 248 99 80 chr5 110043241 110043399 -93042133 + Charlie4a DNA MER1_type 331 485 -23 2125 142 82 17 chr5 110045307 110045709 -93039823 - MSTA LTR MaLR 0 428 1 24 53 0 0 chr5 110046584 110046622 -93038910 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr5 110047246 110047291 -93038241 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 30 chr5 110047613 110047628 -93037904 + AT_rich Low_complexity Low_complexity 1 15 -17 1337 114 19 0 chr5 110047628 110047838 -93037694 - L1PA13 LINE L1 -3 6160 5947 22 0 0 30 chr5 110047838 110047855 -93037677 + AT_rich Low_complexity Low_complexity 15 32 0 22 70 0 0 chr5 110048124 110048167 -93037365 + AT_rich Low_complexity Low_complexity 1 43 0 258 235 15 0 chr5 110048190 110048258 -93037274 + (TA)n Simple_repeat Simple_repeat 2 70 0 222 333 67 29 chr5 110049348 110049453 -93036079 + L2 LINE L2 3151 3259 -13 229 317 0 0 chr5 110049893 110049953 -93035579 - MIR SINE MIR -115 147 88 1366 233 42 0 chr5 110049954 110050426 -93035106 + L1MC/D LINE L1 5008 5495 -743 668 163 41 0 chr5 110050436 110050559 -93034973 - MLT2B1 LTR ERVL -392 128 1 2110 119 3 0 chr5 110050562 110050856 -93034676 + AluSq SINE Alu 3 297 -16 683 151 26 40 chr5 110050861 110051013 -93034519 + L1MC2 LINE L1 6180 6329 -15 243 0 0 0 chr5 110051023 110051050 -93034482 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 1770 217 87 27 chr5 110051481 110051998 -93033534 - LTR10A LTR ERV1 -61 548 1 502 202 53 0 chr5 110051998 110052112 -93033420 - L1MA9 LINE L1 -46 6266 6147 22 0 0 0 chr5 110052471 110052493 -93033039 + AT_rich Low_complexity Low_complexity 1 22 0 2110 192 56 23 chr5 110052930 110053415 -93032117 - L1MA8 LINE L1 -5 6286 5786 3486 154 12 2 chr5 110053415 110053993 -93031539 - Tigger4(Zombi) DNA MER2_type 0 2731 2148 1196 199 22 4 chr5 110053988 110054219 -93031313 - Tigger4(Zombi) DNA MER2_type -2496 235 1 * 2888 158 20 8 chr5 110054219 110054884 -93030648 - L1MA8 LINE L1 -504 5787 5113 2048 128 0 0 chr5 110054991 110055288 -93030244 - AluSx SINE Alu -7 305 9 200 354 15 0 chr5 110055847 110055912 -93029620 - L2 LINE L2 -3 3310 3245 2178 101 0 3 chr5 110056417 110056714 -93028818 - AluSx SINE Alu -14 298 3 3513 224 34 55 chr5 110056726 110057802 -93027730 - L1MD2 LINE L1 -2 6357 5304 286 250 10 10 chr5 110057819 110057919 -93027613 - L1MD2 LINE L1 -3307 2839 2740 1403 200 11 14 chr5 110057979 110058303 -93027229 - AluJb SINE Alu 0 323 1 22 0 0 0 chr5 110059118 110059140 -93026392 + AT_rich Low_complexity Low_complexity 1 22 0 493 322 109 0 chr5 110059277 110059488 -93026044 + LTR16A LTR ERVL 203 436 -14 25 99 0 0 chr5 110059750 110059831 -93025701 + AT_rich Low_complexity Low_complexity 1 81 0 2389 34 13 3 chr5 110060313 110060611 -93024921 - AluY SINE Alu -10 301 1 219 154 0 0 chr5 110060711 110060750 -93024782 + (TTG)n Simple_repeat Simple_repeat 2 40 0 2109 79 18 0 chr5 110060973 110061252 -93024280 - AluY SINE Alu -27 284 1 248 388 45 0 chr5 110061669 110061803 -93023729 + L2 LINE L2 2915 3054 -259 257 255 53 32 chr5 110062142 110062236 -93023296 + MIR SINE MIR 120 215 -47 28 48 0 0 chr5 110062644 110062686 -93022846 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 110062983 110063019 -93022513 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr5 110063422 110063444 -93022088 + (A)n Simple_repeat Simple_repeat 1 22 0 829 329 38 29 chr5 110064416 110064860 -93020672 + LTR16A LTR ERVL 1 448 -2 21 36 0 0 chr5 110065789 110065817 -93019715 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 110066065 110066086 -93019446 + AT_rich Low_complexity Low_complexity 1 21 0 439 325 136 16 chr5 110066361 110066604 -93018928 - L3 LINE CR1 -338 1239 968 207 0 0 0 chr5 110066769 110066792 -93018740 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 459 205 162 0 chr5 110066792 110066909 -93018623 - AluJo SINE Alu -176 136 1 1624 113 17 0 chr5 110067021 110067251 -93018281 - AluSg/x SINE Alu -12 298 65 5250 187 22 4 chr5 110069217 110070314 -93015218 + L1PA13 LINE L1 2273 3389 -2757 8519 146 9 19 chr5 110070320 110072697 -93012835 + L1PA13 LINE L1 3806 6156 -7 233 321 0 12 chr5 110073388 110073469 -93012063 + L2 LINE L2 3187 3266 -6 2392 112 5 35 chr5 110073646 110074021 -93011511 + THE1B LTR MaLR 1 364 0 617 282 70 19 chr5 110074026 110074356 -93011176 + L1ME3A LINE L1 5792 6158 -9 686 256 50 20 chr5 110075526 110075725 -93009807 + L1MA1 LINE L1 231 435 -7130 16469 179 21 16 chr5 110075727 110076853 -93008679 + L1MA1 LINE L1 636 1755 -5810 258 32 0 0 chr5 110076853 110076884 -93008648 + (GA)n Simple_repeat Simple_repeat 2 32 0 16469 179 21 16 chr5 110076884 110078548 -93006984 + L1MA1 LINE L1 1755 3409 -4156 1942 152 23 0 chr5 110078548 110078851 -93006681 + AluSx SINE Alu 1 310 -2 16469 179 21 16 chr5 110078851 110080540 -93004992 + L1MA1 LINE L1 3409 5139 -2426 5155 127 19 8 chr5 110080540 110081392 -93004140 + L1MA1 LINE L1 6860 7720 -1 16469 179 21 16 chr5 110081392 110081406 -93004126 + L1MA1 LINE L1 5139 5151 -2414 2398 263 70 32 chr5 110081977 110082735 -93002797 - L1M2b LINE L1 -6407 802 16 277 286 62 9 chr5 110082993 110083105 -93002427 + MER63 DNA MER1_type 674 791 -271 348 43 0 0 chr5 110083628 110083674 -93001858 + (CA)n Simple_repeat Simple_repeat 2 47 0 2284 112 0 0 chr5 110083720 110084032 -93001500 - AluSq SINE Alu 0 313 2 22 56 0 0 chr5 110085020 110085056 -93000476 + AT_rich Low_complexity Low_complexity 1 36 0 31 58 0 0 chr5 110086394 110086446 -92999086 + AT_rich Low_complexity Low_complexity 1 52 0 1986 151 0 10 chr5 110086963 110087268 -92998264 - AluSx SINE Alu -5 307 6 231 61 0 0 chr5 110087370 110087403 -92998129 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 32 0 0 chr5 110087473 110087504 -92998028 + AT_rich Low_complexity Low_complexity 1 31 0 1306 324 195 12 chr5 110088954 110089884 -92995648 + L2 LINE L2 1855 2954 -360 1507 179 66 66 chr5 110089902 110090281 -92995251 + MSTD LTR MaLR 1 379 -17 619 283 85 28 chr5 110090302 110090549 -92994983 + L2 LINE L2 3001 3261 -52 453 299 122 0 chr5 110090980 110091234 -92994298 + Charlie7 DNA MER1_type 401 685 -1927 325 336 15 0 chr5 110091382 110091513 -92994019 + Charlie7 DNA MER1_type 885 1017 -1595 309 271 42 72 chr5 110091962 110092198 -92993334 + Charlie7 DNA MER1_type 1632 1860 -752 1082 239 41 30 chr5 110092216 110092752 -92992780 - L1ME LINE L1 -652 5514 4963 337 266 47 90 chr5 110092752 110093030 -92992502 + L1ME LINE L1 4421 4686 -1460 244 143 29 0 chr5 110093339 110093409 -92992123 + (TA)n Simple_repeat Simple_repeat 1 72 0 214 189 95 0 chr5 110093421 110093569 -92991963 + (TA)n Simple_repeat Simple_repeat 1 162 0 681 224 26 0 chr5 110093729 110093881 -92991651 - AluJb SINE Alu -23 289 134 368 359 47 9 chr5 110093933 110094253 -92991279 + L1ME LINE L1 5386 5717 -453 645 305 57 3 chr5 110094711 110095078 -92990454 + L1ME LINE L1 4862 5248 -898 568 247 161 7 chr5 110095187 110095479 -92990053 + L1ME LINE L1 5377 5713 -457 963 302 88 35 chr5 110095480 110096430 -92989102 - L1MCc LINE L1 -4369 2753 1587 871 253 69 0 chr5 110096422 110096655 -92988877 - L1MCc LINE L1 -5209 1214 966 * 27 62 0 0 chr5 110096825 110096873 -92988659 + AT_rich Low_complexity Low_complexity 1 48 0 2395 54 0 3 chr5 110097337 110097631 -92987901 - AluY SINE Alu -18 293 1 2102 102 7 7 chr5 110097821 110098114 -92987418 + AluSg SINE Alu 9 301 -9 1810 140 21 0 chr5 110098330 110098615 -92986917 + AluSx SINE Alu 12 302 -10 24 53 0 0 chr5 110100231 110100269 -92985263 + AT_rich Low_complexity Low_complexity 1 38 0 871 127 61 12 chr5 110100578 110100743 -92984789 - L1MC3 LINE L1 -1861 5924 5752 291 224 144 32 chr5 110100836 110100961 -92984571 + L1M4 LINE L1 5044 5182 -964 1022 291 155 5 chr5 110100966 110101412 -92984120 - MLT1E2 LTR MaLR -3 623 111 317 284 47 8 chr5 110101537 110101664 -92983868 - MLT1E2-int LTR MaLR 0 1371 1240 308 233 61 110 chr5 110101879 110102042 -92983490 - MLT1E2-int LTR MaLR -275 1096 942 21 0 0 0 chr5 110102101 110102122 -92983410 + AT_rich Low_complexity Low_complexity 1 21 0 435 174 0 0 chr5 110102202 110102271 -92983261 - AluSg/x SINE Alu -27 283 215 1446 280 34 85 chr5 110102308 110103145 -92982387 - MLT1E2-int LTR MaLR -563 808 15 1293 273 61 25 chr5 110103213 110103657 -92981875 - MLT1E2 LTR MaLR -30 596 137 362 222 33 11 chr5 110103737 110103827 -92981705 + MLT1C LTR MaLR 344 435 -32 3451 164 11 18 chr5 110103858 110105014 -92980518 + L1PA14 LINE L1 4712 5864 -297 1308 110 0 0 chr5 110105119 110105292 -92980240 - AluSg/x SINE Alu -1 311 139 415 161 92 23 chr5 110105292 110105379 -92980153 + AluSg/x SINE Alu 197 289 -23 469 141 0 13 chr5 110105728 110105806 -92979726 - AluJb SINE Alu -179 133 57 1285 259 70 30 chr5 110107122 110107683 -92977849 - MER69 DNA AcHobo -28 2498 1916 294 384 171 11 chr5 110107811 110108168 -92977364 + L2 LINE L2 2553 2966 -348 25 0 0 0 chr5 110108458 110108483 -92977049 + AT_rich Low_complexity Low_complexity 1 25 0 211 343 45 0 chr5 110108802 110108869 -92976663 - L2 LINE L2 -23 3290 3221 237 258 56 34 chr5 110109819 110109908 -92975624 - MER34C LTR ERV1 0 585 495 820 213 153 60 chr5 110109912 110110318 -92975214 - MER39 LTR ERV1 -114 593 20 200 333 88 20 chr5 110110568 110110670 -92974862 - L2 LINE L2 -15 3298 3190 252 302 35 12 chr5 110111307 110111393 -92974139 + MIR SINE MIR 124 211 -51 243 0 0 0 chr5 110111497 110111524 -92974008 + (TG)n Simple_repeat Simple_repeat 2 28 0 1618 244 59 24 chr5 110111620 110112129 -92973403 - MER90 LTR ERV1 -81 533 7 200 430 0 7 chr5 110112382 110112517 -92973015 - L2 LINE L2 -193 3079 2946 243 380 62 16 chr5 110112746 110113004 -92972528 - L2 LINE L2 -845 2469 2200 2189 108 0 3 chr5 110113066 110113363 -92972169 + AluSq SINE Alu 1 296 -17 1148 197 210 10 chr5 110113855 110114155 -92971377 - MSTA LTR MaLR -61 367 8 7430 157 34 62 chr5 110114162 110115784 -92969748 - MSTA-int LTR MaLR 0 1580 5 1297 180 113 84 chr5 110115788 110115990 -92969542 - MSTA LTR MaLR 0 428 233 294 29 0 0 chr5 110115990 110116025 -92969507 + (GA)n Simple_repeat Simple_repeat 1 35 0 1297 180 113 84 chr5 110116025 110116238 -92969294 - MSTA LTR MaLR -195 233 1 201 361 49 16 chr5 110116687 110116809 -92968723 - MER5B DNA MER1_type -41 137 12 7621 203 28 14 chr5 110117028 110117193 -92968339 - L1PA16 LINE L1 -249 5917 5756 2771 156 109 25 chr5 110117193 110117759 -92967773 + LTR18B LTR ERVL 1 614 0 7621 203 28 14 chr5 110117759 110119910 -92965622 - L1PA16 LINE L1 -410 5756 3576 310 343 75 33 chr5 110120598 110120811 -92964721 + L2 LINE L2 2640 2861 -453 238 273 0 13 chr5 110120855 110120932 -92964600 - LTR33A LTR ERVL -2 521 446 1808 141 30 69 chr5 110122323 110122657 -92962875 - MER1B DNA MER1_type 0 339 19 724 290 37 37 chr5 110123022 110123454 -92962078 - MLT1H LTR MaLR 0 549 3 408 330 20 35 chr5 110123633 110123846 -92961686 + MLT2B1 LTR ERVL 276 491 -63 267 284 0 14 chr5 110123851 110123925 -92961607 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 267 79 0 0 chr5 110124131 110124169 -92961363 + (TG)n Simple_repeat Simple_repeat 1 38 0 328 299 0 30 chr5 110124170 110124334 -92961198 + (TATATG)n Simple_repeat Simple_repeat 3 161 0 213 335 116 17 chr5 110124966 110125139 -92960393 + MIR SINE MIR 2 191 -71 635 162 17 17 chr5 110125814 110125931 -92959601 - MER57B LTR ERV1 0 434 318 288 29 0 0 chr5 110125923 110125957 -92959575 - MER57A LTR ERV1 -369 34 1 * 22 0 0 0 chr5 110126615 110126637 -92958895 + AT_rich Low_complexity Low_complexity 1 22 0 183 284 54 68 chr5 110126920 110126994 -92958538 - MIR SINE MIR -21 241 169 43711 43 1 1 chr5 110127572 110133728 -92951804 + L1PA4 LINE L1 1 6152 -3 31 76 0 0 chr5 110134433 110134499 -92951033 + AT_rich Low_complexity Low_complexity 1 66 0 41 66 0 0 chr5 110136101 110136177 -92949355 + AT_rich Low_complexity Low_complexity 1 76 0 22 56 0 0 chr5 110136913 110136949 -92948583 + AT_rich Low_complexity Low_complexity 1 36 0 365 331 74 7 chr5 110137121 110137269 -92948263 - L3 LINE CR1 -291 1286 1129 23 54 0 0 chr5 110139034 110139071 -92946461 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 110139767 110139790 -92945742 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr5 110140494 110140523 -92945009 + AT_rich Low_complexity Low_complexity 1 29 0 209 314 86 37 chr5 110141458 110141679 -92943853 + MIR SINE MIR 5 242 -20 388 311 194 10 chr5 110142145 110142351 -92943181 - MIR SINE MIR -16 246 3 27 0 0 0 chr5 110142586 110142613 -92942919 + AT_rich Low_complexity Low_complexity 1 27 0 213 39 0 0 chr5 110142878 110142904 -92942628 + (CA)n Simple_repeat Simple_repeat 2 27 0 291 266 0 0 chr5 110142904 110142983 -92942549 + L1MC4 LINE L1 6624 6702 -1340 249 305 93 25 chr5 110143324 110143442 -92942090 + MIR SINE MIR 118 243 -19 4382 128 12 0 chr5 110143512 110144201 -92941331 - L1PA14 LINE L1 -5 6156 5460 3967 129 18 18 chr5 110144205 110144888 -92940644 + L1PA13 LINE L1 5476 6158 -5 1273 119 36 0 chr5 110144888 110145156 -92940376 - L1PA14 LINE L1 -691 5470 5193 * 8235 193 9 4 chr5 110145152 110146767 -92938765 + L1PA14 LINE L1 3575 5197 -949 361 370 0 15 chr5 110146767 110146902 -92938630 - MIR SINE MIR -118 144 12 2138 274 144 119 chr5 110147291 110149766 -92935766 + L2 LINE L2 92 2629 -685 210 164 0 0 chr5 110149795 110149850 -92935682 + (TA)n Simple_repeat Simple_repeat 1 55 0 211 343 45 0 chr5 110149927 110149994 -92935538 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 110150312 110150337 -92935195 + AT_rich Low_complexity Low_complexity 1 25 0 225 283 11 22 chr5 110150476 110150568 -92934964 + L1ME LINE L1 5326 5416 -746 306 373 162 16 chr5 110150627 110151077 -92934455 - L2 LINE L2 -348 2966 2451 1496 187 62 63 chr5 110151323 110151840 -92933692 + MER67C LTR ERV1 1 486 -28 233 328 61 8 chr5 110151863 110151994 -92933538 + MER69 DNA AcHobo 218 355 -2171 1069 156 9 165 chr5 110152145 110152478 -92933054 + AluJo SINE Alu 1 281 -31 1297 256 69 32 chr5 110152747 110153309 -92932223 + MER69 DNA AcHobo 1916 2498 -28 673 193 33 20 chr5 110154930 110155080 -92930452 + MLT1C LTR MaLR 1 152 -315 3451 222 77 50 chr5 110155109 110155405 -92930127 + MLT1C-int LTR MaLR 23 310 -1061 1808 179 0 0 chr5 110155405 110155690 -92929842 - AluJb SINE Alu -25 287 3 3451 222 77 50 chr5 110155690 110156300 -92929232 + MLT1C-int LTR MaLR 310 1090 -281 2019 131 0 10 chr5 110156300 110156598 -92928934 + AluSx SINE Alu 1 295 -17 3451 222 77 50 chr5 110156598 110156875 -92928657 + MLT1C-int LTR MaLR 1090 1358 -13 1745 243 38 7 chr5 110156951 110157370 -92928162 + MLT1C LTR MaLR 36 467 0 205 373 91 16 chr5 110161706 110161958 -92923574 + L3 LINE CR1 1300 1570 -7 260 319 18 9 chr5 110162511 110162624 -92922908 + L1ME LINE L1 5546 5659 -511 * 1969 219 80 10 chr5 110162613 110163276 -92922256 + L1MCb LINE L1 754 1455 -4853 28 29 0 0 chr5 110166148 110166183 -92919349 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 110166441 110166466 -92919066 + AT_rich Low_complexity Low_complexity 1 25 0 361 85 0 0 chr5 110167302 110167349 -92918183 + Alu SINE Alu 248 294 -8 210 167 0 0 chr5 110167350 110167386 -92918146 + (TA)n Simple_repeat Simple_repeat 2 37 0 772 223 0 13 chr5 110167672 110167849 -92917683 - FRAM SINE Alu 0 166 1 2134 114 26 20 chr5 110168121 110168473 -92917059 - L1PA14 LINE L1 0 6161 5808 301 307 119 89 chr5 110168865 110169328 -92916204 - L1M2 LINE L1 -6081 768 292 2047 302 164 13 chr5 110170466 110171551 -92913981 + L2 LINE L2 1381 2629 -685 183 114 0 0 chr5 110171580 110171615 -92913917 + (TA)n Simple_repeat Simple_repeat 2 36 0 211 343 45 0 chr5 110171692 110171759 -92913773 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 110172077 110172102 -92913430 + AT_rich Low_complexity Low_complexity 1 25 0 225 283 11 22 chr5 110172241 110172333 -92913199 + L1M LINE L1 5326 5416 -746 297 376 162 16 chr5 110172392 110172842 -92912690 - L2 LINE L2 -348 2966 2451 1457 191 62 63 chr5 110173088 110173605 -92911927 + MER67C LTR ERV1 1 486 -28 233 328 61 8 chr5 110173628 110173759 -92911773 + MER69 DNA AcHobo 218 355 -2171 1095 156 9 165 chr5 110173910 110174243 -92911289 + AluJo SINE Alu 1 281 -31 1240 256 69 32 chr5 110174512 110175074 -92910458 + MER69 DNA AcHobo 1916 2498 -28 472 141 0 13 chr5 110176388 110176466 -92909066 + AluJb SINE Alu 57 133 -179 400 172 92 23 chr5 110176815 110176902 -92908630 - AluSg/x SINE Alu -23 286 194 1308 115 0 0 chr5 110176902 110177076 -92908456 + AluSg/x SINE Alu 139 312 0 2037 141 10 13 chr5 110177086 110177398 -92908134 + AluJo SINE Alu 1 311 -1 192 263 0 18 chr5 110177493 110177550 -92907982 + MIR3 SINE MIR 148 203 -5 960 124 0 45 chr5 110177692 110178068 -92907464 + (TA)n Simple_repeat Simple_repeat 1 360 0 24 0 0 0 chr5 110178751 110178775 -92906757 + AT_rich Low_complexity Low_complexity 1 24 0 255 259 17 0 chr5 110180182 110180240 -92905292 + MER69 DNA AcHobo 26 84 -93 338 266 211 0 chr5 110180260 110180388 -92905144 + MER5A DNA MER1_type 35 189 0 255 281 56 34 chr5 110180733 110180822 -92904710 + Charlie8 DNA MER1_type 1 91 -2326 742 276 74 21 chr5 110180974 110181217 -92904315 - MIR SINE MIR -3 259 4 23 33 0 0 chr5 110181742 110181772 -92903760 + AT_rich Low_complexity Low_complexity 1 30 0 1702 171 31 11 chr5 110181835 110182187 -92903345 - L1MA4 LINE L1 -6 6294 5936 3070 155 30 4 chr5 110182187 110182725 -92902807 - L1PA15 LINE L1 -6 6159 5604 343 175 0 0 chr5 110182726 110182789 -92902743 - L1PA15 LINE L1 -33 6132 6070 313 94 0 38 chr5 110182782 110182835 -92902697 - L1MA4 LINE L1 -602 5702 5652 * 401 341 16 0 chr5 110183028 110183154 -92902378 + LTR16C LTR ERVL 69 196 -295 256 318 151 24 chr5 110183672 110183798 -92901734 + L2 LINE L2 2831 2972 -341 * 693 269 71 102 chr5 110183795 110184392 -92901140 - L2 LINE L2 -1 3312 2736 * 779 249 97 55 chr5 110184387 110184717 -92900815 + L2 LINE L2 2966 3309 -4 552 373 62 8 chr5 110184724 110185081 -92900451 - L2 LINE L2 -2095 1219 844 21 57 0 0 chr5 110187012 110187047 -92898485 + AT_rich Low_complexity Low_complexity 1 35 0 1802 165 19 10 chr5 110187370 110187679 -92897853 - AluJb SINE Alu 0 312 1 2273 83 42 0 chr5 110188152 110188440 -92897092 - AluSx SINE Alu -12 300 1 1975 220 77 67 chr5 110189403 110189512 -92896020 + MER82 DNA MER2_type 79 185 -468 2075 116 0 40 chr5 110189512 110189814 -92895718 + AluSx SINE Alu 1 290 -22 1975 220 77 67 chr5 110189814 110190273 -92895259 + MER82 DNA MER2_type 185 653 0 260 313 30 30 chr5 110190460 110190594 -92894938 + MLT1H LTR MaLR 29 162 -387 914 158 17 57 chr5 110190935 110191112 -92894420 - FAM SINE Alu -8 41 1 446 244 71 8 chr5 110191165 110191292 -92894240 + MLT1G1 LTR MaLR 5 139 -456 2282 123 25 6 chr5 110191391 110191748 -92893784 + THE1B LTR MaLR 1 364 0 9449 105 63 44 chr5 110191749 110193292 -92892240 + THE1B-int LTR MaLR 2 1574 -6 1289 113 49 5 chr5 110193299 110193502 -92892030 + THE1B LTR MaLR 3 214 -150 744 177 15 0 chr5 110193511 110193641 -92891891 - FLAM_C SINE Alu -1 132 1 626 137 0 0 chr5 110193643 110193745 -92891787 - AluSp/q SINE Alu -2 311 210 225 0 0 0 chr5 110196773 110196798 -92888734 + (T)n Simple_repeat Simple_repeat 1 25 0 281 250 115 19 chr5 110197797 110197901 -92887631 + L2 LINE L2 3104 3217 -96 1710 158 69 0 chr5 110197907 110198210 -92887322 + MER2 DNA MER2_type 1 324 -21 1209 119 106 0 chr5 110198210 110198428 -92887104 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 110198444 110198474 -92887058 + AT_rich Low_complexity Low_complexity 1 30 0 1327 191 46 39 chr5 110198711 110198755 -92886777 + MLT1A2 LTR MaLR 1 43 -353 2247 87 3 13 chr5 110198755 110199055 -92886477 + AluY SINE Alu 1 297 -14 1327 191 46 39 chr5 110199055 110199336 -92886196 + MLT1A2 LTR MaLR 43 341 -55 2018 139 13 3 chr5 110201794 110202103 -92883429 + AluSx SINE Alu 1 312 0 1761 162 60 0 chr5 110202442 110202726 -92882806 + AluSq SINE Alu 1 301 -12 707 199 38 0 chr5 110203064 110203250 -92882282 - L1MA3 LINE L1 -2 6303 6111 2062 180 17 19 chr5 110205193 110205604 -92879928 + MSTA LTR MaLR 19 428 0 1399 217 0 25 chr5 110205856 110206142 -92879390 - AluJb SINE Alu -33 279 1 513 244 30 30 chr5 110206142 110206277 -92879255 - LTR64 LTR ERVK -19 539 405 24 0 0 0 chr5 110206311 110206335 -92879197 + AT_rich Low_complexity Low_complexity 1 24 0 201 231 0 46 chr5 110206678 110206743 -92878789 + A-rich Low_complexity Low_complexity 4 65 0 235 250 28 42 chr5 110207353 110207425 -92878107 + LTR67 LTR ERVL 98 168 -389 * 267 235 14 37 chr5 110207361 110207447 -92878085 + MLT1J LTR MaLR 64 144 -306 330 184 64 55 chr5 110207572 110207681 -92877851 + LTR33A LTR ERVL 407 516 -7 21 0 0 0 chr5 110208009 110208030 -92877502 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 110208083 110208127 -92877405 + AT_rich Low_complexity Low_complexity 1 44 0 1786 44 4 0 chr5 110209331 110209558 -92875974 - L1PA4 LINE L1 0 6155 5928 460 261 6 13 chr5 110209642 110209799 -92875733 - L1MD2 LINE L1 -10 6349 6194 530 244 77 18 chr5 110209812 110209980 -92875552 - L1MD2 LINE L1 -218 6141 5964 2348 72 7 3 chr5 110210394 110210685 -92874847 + AluSp SINE Alu 3 294 -19 1364 96 0 0 chr5 110210747 110210935 -92874597 - L1PB1 LINE L1 -2 6149 5962 504 157 25 35 chr5 110210975 110211151 -92874381 + (TA)n Simple_repeat Simple_repeat 2 177 -18 2016 140 14 0 chr5 110211151 110211443 -92874089 + AluSx SINE Alu 2 297 -15 504 157 25 35 chr5 110211443 110211462 -92874070 + (TA)n Simple_repeat Simple_repeat 177 195 0 416 125 14 0 chr5 110211525 110211597 -92873935 - L1MB5 LINE L1 -8 6166 6094 336 309 67 62 chr5 110211688 110212093 -92873439 + MLT1H1 LTR MaLR 95 518 -37 21 0 0 0 chr5 110212843 110212864 -92872668 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 110213061 110213085 -92872447 + AT_rich Low_complexity Low_complexity 1 24 0 340 266 24 0 chr5 110213326 110213450 -92872082 - L1ME4a LINE L1 -244 5877 5751 3252 228 108 75 chr5 110213669 110214905 -92870627 - Zaphod DNA AcHobo -39 3992 2669 1351 148 4 0 chr5 110214905 110215135 -92870397 + L1MA7 LINE L1 6061 6291 0 3252 228 108 75 chr5 110215135 110215848 -92869684 - Zaphod DNA AcHobo -1362 2669 1980 10530 34 1 0 chr5 110215876 110217907 -92867625 - L1PA3 LINE L1 -4 6151 4119 7654 24 1 0 chr5 110217909 110218964 -92866568 + L1PA3 LINE L1 5100 6155 0 1735 134 35 0 chr5 110219464 110219725 -92865807 - AluJb SINE Alu -36 276 7 246 62 0 0 chr5 110220264 110220296 -92865236 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 907 188 4 109 chr5 110220756 110221012 -92864520 - MLT1A1 LTR MaLR -124 241 13 24 53 0 0 chr5 110221334 110221372 -92864160 + AT_rich Low_complexity Low_complexity 1 38 0 309 89 0 0 chr5 110222496 110222541 -92862991 + (TG)n Simple_repeat Simple_repeat 2 46 0 2186 169 18 2 chr5 110224085 110224481 -92861051 + L1MB7 LINE L1 5544 5945 -239 2010 173 19 6 chr5 110224491 110224850 -92860682 - L1PB4 LINE L1 -11 6145 5782 426 121 0 0 chr5 110224852 110224918 -92860614 + (TA)n Simple_repeat Simple_repeat 1 66 0 2741 148 36 40 chr5 110224923 110225280 -92860252 - L1PB4 LINE L1 -368 5788 5429 1734 158 40 30 chr5 110225280 110225577 -92859955 - AluSx SINE Alu -12 300 1 2741 148 36 40 chr5 110225577 110225896 -92859636 - L1PB4 LINE L1 -727 5429 5110 562 192 0 0 chr5 110225884 110225983 -92859549 + L1MB5 LINE L1 5777 5875 -299 * 438 194 58 41 chr5 110225982 110226167 -92859365 - L1 LINE L1 -754 5392 5197 * 1670 171 98 20 chr5 110226353 110226710 -92858822 + L1M2 LINE L1 5398 5782 -530 270 0 0 0 chr5 110226710 110226740 -92858792 + (CA)n Simple_repeat Simple_repeat 2 31 0 411 113 0 0 chr5 110226850 110226912 -92858620 + (GGGAA)n Simple_repeat Simple_repeat 1 62 0 22 56 0 0 chr5 110227626 110227662 -92857870 + AT_rich Low_complexity Low_complexity 1 36 0 41 36 0 0 chr5 110227761 110227816 -92857716 + AT_rich Low_complexity Low_complexity 1 55 0 399 316 146 6 chr5 110229087 110229245 -92856287 + MER5A DNA MER1_type 10 189 0 3968 164 16 26 chr5 110229834 110232532 -92853000 - L1PA13 LINE L1 -3 6160 3388 608 257 17 46 chr5 110232532 110232707 -92852825 + L1PA13 LINE L1 769 938 -5849 2891 73 0 15 chr5 110232707 110233104 -92852428 + L1PA6 LINE L1 5764 6154 0 854 210 6 0 chr5 110233416 110233573 -92851959 + FRAM SINE Alu 1 158 -18 21 71 0 0 chr5 110234006 110234048 -92851484 + AT_rich Low_complexity Low_complexity 1 42 0 1450 197 48 24 chr5 110234492 110234781 -92850751 - AluJo SINE Alu -14 298 3 285 303 20 30 chr5 110235539 110235638 -92849894 - L2 LINE L2 -222 3050 2953 188 139 0 23 chr5 110236119 110236162 -92849370 + (TTTTTG)n Simple_repeat Simple_repeat 4 45 0 225 343 91 34 chr5 110237402 110237787 -92847745 - L2 LINE L2 -1302 2012 1606 2146 122 10 0 chr5 110238271 110238565 -92846967 + AluSx SINE Alu 1 297 -15 444 301 90 74 chr5 110238692 110238866 -92846666 + MIR SINE MIR 3 184 -78 186 43 0 0 chr5 110238866 110238889 -92846643 + (CA)n Simple_repeat Simple_repeat 2 24 0 444 301 90 74 chr5 110238889 110238970 -92846562 + MIR SINE MIR 184 262 0 204 231 0 0 chr5 110240159 110240211 -92845321 + (TA)n Simple_repeat Simple_repeat 2 53 0 3084 183 37 3 chr5 110240212 110240786 -92844746 - MER6A DNA MER2_type -12 593 1 329 234 64 11 chr5 110240787 110240881 -92844651 - L1MA9 LINE L1 -84 6228 6130 1262 228 15 15 chr5 110240917 110241241 -92844291 - L1MA9 LINE L1 -176 6136 5813 9924 236 25 24 chr5 110241404 110244942 -92840590 + L1PA13 LINE L1 1115 4495 -2302 2282 108 3 0 chr5 110244942 110245247 -92840285 + AluSx SINE Alu 1 306 -6 9924 236 25 24 chr5 110245247 110246042 -92839490 + L1PA13 LINE L1 4495 5287 -1510 200 83 0 28 chr5 110246046 110246082 -92839450 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 44213 38 1 2 chr5 110246082 110252210 -92833322 - L1PA3 LINE L1 -24 6131 8 2583 204 44 19 chr5 110252213 110253015 -92832517 + L1M1 LINE L1 4631 5463 -743 945 48 0 16 chr5 110253015 110253138 -92832394 + L1PA6 LINE L1 6025 6147 -7 29 0 0 0 chr5 110253157 110253186 -92832346 + AT_rich Low_complexity Low_complexity 1 29 0 2367 188 52 2 chr5 110253186 110253627 -92831905 - LTR45 LTR ERV1 -62 463 1 719 274 116 14 chr5 110253632 110253917 -92831615 + L1ME2 LINE L1 5851 6164 0 281 281 12 0 chr5 110253936 110254018 -92831514 + L1ME3A LINE L1 5807 5889 -281 3515 140 80 9 chr5 110254055 110254727 -92830805 + L1PB4 LINE L1 5436 6155 -1 24 0 0 0 chr5 110255167 110255191 -92830341 + AT_rich Low_complexity Low_complexity 1 24 0 212 57 0 29 chr5 110256754 110256789 -92828743 + (TG)n Simple_repeat Simple_repeat 1 34 0 7450 199 101 35 chr5 110258022 110259668 -92825864 - MER52A LTR ERV1 0 1755 1 1136 246 17 3 chr5 110259700 110259988 -92825544 - L1M4 LINE L1 -1069 5575 5284 394 200 0 0 chr5 110260073 110260148 -92825384 - L1M4 LINE L1 -1367 5277 5203 * 1938 238 59 20 chr5 110260142 110260510 -92825022 - L1M4 LINE L1 -2944 3700 3348 2190 106 50 34 chr5 110260510 110260868 -92824664 - THE1B LTR MaLR 0 364 1 1938 238 59 20 chr5 110260868 110261213 -92824319 - L1M4 LINE L1 -3296 3348 2959 22 94 0 0 chr5 110261223 110261287 -92824245 + AT_rich Low_complexity Low_complexity 1 64 0 2241 228 69 21 chr5 110261287 110262102 -92823430 - L1M4 LINE L1 -4831 1711 937 2112 252 40 51 chr5 110262207 110262898 -92822634 - L1M4 LINE L1 -5844 698 15 449 240 52 0 chr5 110262911 110263007 -92822525 - L2 LINE L2 -5 3308 3208 317 305 63 11 chr5 110263240 110263335 -92822197 + L2 LINE L2 3169 3268 -4 21 0 0 0 chr5 110264713 110264734 -92820798 + AT_rich Low_complexity Low_complexity 1 21 0 1031 178 30 34 chr5 110264812 110264981 -92820551 + L1M3 LINE L1 5476 5659 -509 2091 138 3 0 chr5 110264981 110265278 -92820254 + AluSq SINE Alu 1 298 -15 1031 178 30 34 chr5 110265278 110265390 -92820142 + L1M3 LINE L1 5659 5770 -398 2896 23 9 0 chr5 110265490 110265871 -92819661 + L1PA3 LINE L1 5800 6183 0 313 336 31 16 chr5 110266709 110266837 -92818695 + L2 LINE L2 3184 3313 0 1030 179 109 47 chr5 110267273 110267530 -92818002 + AluJo SINE Alu 9 281 -31 327 316 142 19 chr5 110267926 110268138 -92817394 - L3 LINE CR1 -9 1568 1331 1806 136 79 0 chr5 110268432 110268711 -92816821 - AluSq SINE Alu -12 301 1 2506 224 34 5 chr5 110269347 110269962 -92815570 + L1MC3 LINE L1 6431 7063 -722 21 0 0 0 chr5 110270098 110270119 -92815413 + AT_rich Low_complexity Low_complexity 1 21 0 411 21 0 0 chr5 110270232 110270280 -92815252 + (CA)n Simple_repeat Simple_repeat 2 49 0 194 386 112 9 chr5 110270989 110271212 -92814320 - L2 LINE L2 -218 3054 2809 186 437 23 0 chr5 110271253 110271427 -92814105 - L2 LINE L2 -583 2731 2554 2400 76 0 3 chr5 110271620 110271921 -92813611 + AluY SINE Alu 1 300 -11 215 163 0 20 chr5 110272729 110272778 -92812754 + T-rich Low_complexity Low_complexity 6 53 0 4351 63 2 2 chr5 110273119 110273675 -92811857 + L1PA7 LINE L1 5593 6148 -6 38 51 0 0 chr5 110273962 110274021 -92811511 + AT_rich Low_complexity Low_complexity 1 59 0 697 288 27 5 chr5 110274121 110274305 -92811227 + MIR SINE MIR 8 195 -67 626 97 21 0 chr5 110275113 110275206 -92810326 + L1PB3 LINE L1 5695 5789 -365 296 143 18 0 chr5 110275206 110275262 -92810270 + (TG)n Simple_repeat Simple_repeat 2 58 0 2056 156 8 54 chr5 110275266 110275604 -92809928 + L1PB3 LINE L1 5783 6102 -52 1654 152 7 11 chr5 110275604 110275881 -92809651 - AluJb SINE Alu -14 298 23 2056 156 8 54 chr5 110275881 110275932 -92809600 + L1PB3 LINE L1 6102 6154 0 1544 37 0 5 chr5 110276585 110276773 -92808759 - L1PA3 LINE L1 0 6155 5969 2022 142 3 0 chr5 110276881 110277169 -92808363 - AluSg SINE Alu -12 298 10 227 324 99 18 chr5 110277224 110277335 -92808197 - L2 LINE L2 -5 3308 3189 475 307 26 33 chr5 110277631 110277784 -92807748 + MIR SINE MIR 1 152 -110 288 289 72 12 chr5 110278824 110278907 -92806625 + MER5A DNA MER1_type 54 141 -48 232 335 118 13 chr5 110279144 110279296 -92806236 + MIR SINE MIR 92 259 -3 252 143 0 0 chr5 110280798 110280840 -92804692 + (TG)n Simple_repeat Simple_repeat 2 43 0 330 231 26 0 chr5 110280854 110280932 -92804600 - L1MC4 LINE L1 -1339 6703 6624 327 161 0 0 chr5 110280933 110280995 -92804537 - L1MB3 LINE L1 -38 6145 6084 315 49 0 0 chr5 110281953 110281994 -92803538 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 241 68 8 chr5 110283275 110283673 -92801859 + MER54A LTR ERVL 478 899 -2 617 204 66 56 chr5 110283930 110284126 -92801406 - L1ME1 LINE L1 -5 6161 5964 399 328 0 8 chr5 110284287 110284412 -92801120 + L1 LINE L1 2703 2826 -3320 419 307 66 14 chr5 110284415 110284627 -92800905 + L1 LINE L1 2874 3096 -3050 2109 135 11 45 chr5 110285153 110285530 -92800002 + THE1B LTR MaLR 1 364 0 225 284 53 11 chr5 110285681 110285776 -92799756 + LTR67 LTR ERVL 424 522 -35 1655 189 17 8 chr5 110285901 110286256 -92799276 - L1MB8 LINE L1 -7 6171 5814 685 193 14 0 chr5 110286811 110286956 -92798576 + Ricksha DNA DNA 1 147 -1107 4301 151 36 34 chr5 110286973 110287861 -92797671 + Ricksha DNA DNA 2357 3246 -5 3049 221 68 11 chr5 110287921 110288946 -92796586 - L1MB3 LINE L1 0 6994 5917 2294 107 6 3 chr5 110288960 110289306 -92796226 - L1PB1 LINE L1 -1 6150 5804 4751 199 6 29 chr5 110289311 110290497 -92795035 + L1 LINE L1 3541 4699 -1447 3174 98 10 2 chr5 110290494 110290984 -92794548 + L1P5 LINE L1 5281 5774 -377 * 342 286 10 41 chr5 110291202 110291300 -92794232 + L2 LINE L2 3133 3227 -45 1164 253 84 5 chr5 110291335 110291738 -92793794 - L1MB3 LINE L1 -1025 5932 5498 842 265 41 64 chr5 110291756 110291894 -92793638 - L1MB3 LINE L1 -4833 2022 1882 2337 106 0 0 chr5 110291894 110292197 -92793335 + AluSg SINE Alu 1 303 -7 842 265 41 64 chr5 110292197 110292710 -92792822 - L1MB3 LINE L1 -4973 1882 1386 845 195 163 43 chr5 110292711 110292988 -92792544 - MLT1A1 LTR MaLR 0 365 56 1618 229 69 57 chr5 110293015 110293327 -92792205 - L1MB3 LINE L1 -5465 1394 1087 2412 101 31 17 chr5 110293327 110293684 -92791848 + THE1B LTR MaLR 3 364 0 1618 229 69 57 chr5 110293684 110294077 -92791455 - L1MB3 LINE L1 -5772 1087 680 1235 266 58 15 chr5 110294186 110294648 -92790884 - MER110 LTR ERV1 -9 482 1 22 0 0 0 chr5 110294778 110294800 -92790732 + AT_rich Low_complexity Low_complexity 1 22 0 3056 24 0 0 chr5 110295099 110295477 -92790055 - L1PA3 LINE L1 -921 5225 4848 7738 23 0 0 chr5 110295477 110296405 -92789127 + L1PA3 LINE L1 5228 6155 0 609 69 0 0 chr5 110296468 110296555 -92788977 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 508 295 122 60 chr5 110296801 110297171 -92788361 - HAL1 LINE L1 -721 1786 1394 302 289 0 20 chr5 110297328 110297480 -92788052 - HAL1 LINE L1 -1350 1157 1009 307 310 131 9 chr5 110298411 110298746 -92786786 + L1ME4a LINE L1 5526 5901 -220 34 93 0 0 chr5 110298811 110298908 -92786624 + AT_rich Low_complexity Low_complexity 1 97 0 25 0 0 0 chr5 110299882 110299907 -92785625 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 110300242 110300265 -92785267 + AT_rich Low_complexity Low_complexity 1 23 0 1491 191 7 13 chr5 110301437 110301741 -92783791 - AluJo SINE Alu -5 307 6 499 244 182 22 chr5 110301890 110302165 -92783367 - MER46C DNA MER2_type -13 325 7 200 159 45 0 chr5 110302509 110302553 -92782979 + CT-rich Low_complexity Low_complexity 1 46 0 423 0 0 0 chr5 110302558 110302605 -92782927 + (CA)n Simple_repeat Simple_repeat 2 48 0 277 345 68 40 chr5 110302903 110303152 -92782380 - L2 LINE L2 -129 3143 2888 2106 120 3 0 chr5 110305016 110305307 -92780225 - AluSx SINE Alu -20 292 1 226 250 240 30 chr5 110305596 110305696 -92779836 - L2 LINE L2 -9 3304 3184 203 306 27 27 chr5 110305762 110305873 -92779659 - L2 LINE L2 -1763 1551 1441 2046 133 10 3 chr5 110306202 110306504 -92779028 + AluSx SINE Alu 1 304 -8 2212 112 10 0 chr5 110306699 110307002 -92778530 - AluSp SINE Alu -7 306 1 2017 118 57 0 chr5 110307008 110307288 -92778244 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 110307881 110307903 -92777629 + AT_rich Low_complexity Low_complexity 1 22 0 1991 129 7 0 chr5 110308239 110308525 -92777007 + AluSx SINE Alu 1 288 -24 2379 97 0 6 chr5 110308535 110308846 -92776686 + AluSx SINE Alu 1 309 -3 2339 160 22 26 chr5 110309002 110309056 -92776476 + L1MA10 LINE L1 5864 5917 -417 2037 202 215 79 chr5 110309056 110309954 -92775578 - LTR28 LTR ERV1 0 1020 1 2339 160 22 26 chr5 110309954 110310362 -92775170 + L1MA10 LINE L1 5917 6324 -10 241 288 0 0 chr5 110310522 110310595 -92774937 - L1ME LINE L1 -449 5721 5649 730 211 35 75 chr5 110310595 110310822 -92774710 - MER20 DNA MER1_type 0 219 2 336 321 46 40 chr5 110311131 110311249 -92774283 + L1ME3A LINE L1 5532 5648 -522 672 197 34 103 chr5 110311249 110311483 -92774049 + MER20 DNA MER1_type 2 219 0 336 321 46 40 chr5 110311483 110311666 -92773866 + L1ME3A LINE L1 5648 5835 -335 228 67 0 0 chr5 110312969 110312999 -92772533 + (TA)n Simple_repeat Simple_repeat 1 30 0 2164 150 77 26 chr5 110313425 110313893 -92771639 + LTR22B LTR ERVK 1 492 0 308 345 107 14 chr5 110314050 110314395 -92771137 + HAL1 LINE L1 274 650 -1857 22 56 0 0 chr5 110314609 110314645 -92770887 + AT_rich Low_complexity Low_complexity 1 36 0 1457 294 57 44 chr5 110314761 110315419 -92770113 + HAL1 LINE L1 1108 1783 -724 2308 92 0 0 chr5 110315419 110315713 -92769819 + AluSg SINE Alu 11 304 -6 1457 294 57 44 chr5 110315713 110315963 -92769569 + HAL1 LINE L1 1783 2028 -479 718 355 100 37 chr5 110316525 110317247 -92768285 + L2 LINE L2 2211 2977 -337 261 0 0 0 chr5 110317893 110317922 -92767610 + (A)n Simple_repeat Simple_repeat 1 29 0 627 137 0 0 chr5 110322588 110322690 -92762842 + AluSp/q SINE Alu 210 311 -2 758 177 15 0 chr5 110322692 110322822 -92762710 + FLAM_C SINE Alu 1 132 -1 1213 113 49 5 chr5 110322831 110323034 -92762498 - THE1B LTR MaLR -150 214 3 8792 102 65 45 chr5 110323041 110324583 -92760949 - THE1B-int LTR MaLR -6 1574 2 2299 120 25 6 chr5 110324584 110324941 -92760591 - THE1B LTR MaLR 0 364 1 403 244 71 8 chr5 110325040 110325167 -92760365 - MLT1G1 LTR MaLR -456 139 5 937 158 17 57 chr5 110325220 110325397 -92760135 + FAM SINE Alu 1 41 -8 1843 214 79 63 chr5 110326064 110326520 -92759012 - MER82 DNA MER2_type 0 653 185 2121 115 0 39 chr5 110326520 110326825 -92758707 - AluSx SINE Alu -19 293 1 1843 214 79 63 chr5 110326825 110326923 -92758609 - MER82 DNA MER2_type -468 185 90 2226 98 0 7 chr5 110327157 110327452 -92758080 - AluSx SINE Alu -18 294 2 1492 96 32 0 chr5 110327453 110327770 -92757762 - L1P4 LINE L1 -676 5485 5161 2623 11 0 0 chr5 110328185 110328470 -92757062 + AluYa5 SINE Alu 17 301 -10 1814 110 0 55 chr5 110328581 110328871 -92756661 + AluSx SINE Alu 39 312 0 2231 120 0 0 chr5 110328894 110329195 -92756337 + AluSg SINE Alu 1 301 -9 23 0 0 0 chr5 110329448 110329471 -92756061 + GC_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr5 110329491 110329518 -92756014 + (A)n Simple_repeat Simple_repeat 1 27 0 473 16 33 0 chr5 110329963 110330024 -92755508 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 1544 153 39 64 chr5 110330032 110330183 -92755349 - AluJo SINE Alu -37 275 133 1957 130 11 0 chr5 110330183 110330468 -92755064 + AluSx SINE Alu 1 288 -24 1544 153 39 64 chr5 110330468 110330598 -92754934 - AluJo SINE Alu -179 133 1 1964 117 7 23 chr5 110331761 110331934 -92753598 - AluSx SINE Alu 0 302 135 1735 158 0 58 chr5 110331934 110332109 -92753423 - AluJb SINE Alu -19 293 142 2309 104 7 3 chr5 110332109 110332417 -92753115 - AluSc SINE Alu 0 309 1 1735 158 0 58 chr5 110332417 110332552 -92752980 - AluJb SINE Alu -170 142 1 1964 117 7 23 chr5 110332552 110332685 -92752847 - AluSx SINE Alu -167 135 1 2044 123 9 28 chr5 110333272 110333590 -92751942 + AluSx SINE Alu 1 312 0 223 305 115 72 chr5 110333634 110333809 -92751723 + L2 LINE L2 2938 3131 -141 1327 166 54 86 chr5 110333809 110334003 -92751529 - AluJo SINE Alu -7 305 123 1679 138 29 14 chr5 110334003 110334279 -92751253 - AluSg SINE Alu -30 280 1 1327 166 54 86 chr5 110334279 110334398 -92751134 - AluJo SINE Alu -189 123 2 223 305 115 72 chr5 110334398 110334501 -92751031 + L2 LINE L2 3131 3228 -44 2061 148 3 0 chr5 110334827 110335138 -92750394 - AluSx SINE Alu 0 312 1 4252 122 44 4 chr5 110335241 110335963 -92749569 + L1PA16 LINE L1 5403 6153 -13 407 340 5 56 chr5 110336069 110336266 -92749266 - MLT1K LTR MaLR -320 268 82 1064 171 0 6 chr5 110336629 110336805 -92748727 - MLT1A2 LTR MaLR -11 363 189 205 191 48 0 chr5 110336832 110336895 -92748637 + T-rich Low_complexity Low_complexity 6 71 0 1425 83 14 19 chr5 110336901 110337117 -92748415 - AluY SINE Alu -23 288 74 192 306 0 0 chr5 110338399 110338448 -92747084 + L3 LINE CR1 1527 1575 -2 12312 35 0 1 chr5 110339872 110341437 -92744095 + L1P LINE L1 1481 3044 -3102 248 270 11 108 chr5 110341587 110341772 -92743760 - L2 LINE L2 0 3313 3147 549 280 156 6 chr5 110342101 110342398 -92743134 - MLT1G1 LTR MaLR -209 386 1 238 293 120 23 chr5 110342403 110342536 -92742996 - MLT1G1-int LTR MaLR -6 1365 1220 400 212 6 22 chr5 110342583 110342688 -92742844 - MLT1G1 LTR MaLR -292 298 163 303 71 0 0 chr5 110342715 110342757 -92742775 + (CA)n Simple_repeat Simple_repeat 1 42 0 336 185 8 101 chr5 110344011 110344130 -92741402 - MER3 DNA MER1_type 0 209 102 22 0 0 0 chr5 110344439 110344461 -92741071 + AT_rich Low_complexity Low_complexity 1 22 0 5467 28 0 0 chr5 110344797 110345469 -92740063 - L1PA3 LINE L1 -1393 4753 4082 5180 30 1 0 chr5 110345467 110346573 -92738959 + L1PA3 LINE L1 4733 5839 -316 * 186 111 0 0 chr5 110346690 110346717 -92738815 + MIR SINE MIR 115 141 -67 24 85 0 0 chr5 110346948 110347007 -92738525 + AT_rich Low_complexity Low_complexity 1 59 0 28 61 0 0 chr5 110347035 110347084 -92738448 + AT_rich Low_complexity Low_complexity 1 49 0 2300 229 16 32 chr5 110348398 110348961 -92736571 + MLT2B3 LTR ERVL 1 554 0 301 232 0 0 chr5 110349839 110349921 -92735611 + L1MC4a LINE L1 5398 5479 -2329 388 324 44 31 chr5 110349963 110350281 -92735251 + L1MC4a LINE L1 5620 5941 -1867 425 374 137 20 chr5 110350864 110351308 -92734224 - L2 LINE L2 -481 2833 2338 479 91 0 11 chr5 110351563 110351651 -92733881 + L1PA13 LINE L1 6074 6160 -3 22 35 0 0 chr5 110351699 110351728 -92733804 + AT_rich Low_complexity Low_complexity 1 29 0 207 421 68 0 chr5 110353117 110353250 -92732282 - L2 LINE L2 -15 3257 3116 218 277 15 15 chr5 110353382 110353447 -92732085 - L2 LINE L2 -557 2757 2693 274 179 36 0 chr5 110353685 110353741 -92731791 - MER94 DNA DNA 0 134 77 659 282 160 7 chr5 110353885 110354305 -92731227 - LTR50 LTR ERVL -142 653 87 2885 13 0 0 chr5 110356124 110356442 -92729090 - AluYb8 SINE Alu 0 318 1 336 313 90 35 chr5 110356604 110356949 -92728583 - L1MEc LINE L1 -5219 1177 814 327 235 0 0 chr5 110357130 110357192 -92728340 - MER58A DNA MER1_type 0 224 163 400 293 0 0 chr5 110357192 110357298 -92728234 - MER58A DNA MER1_type 0 107 2 372 358 67 8 chr5 110357919 110358173 -92727359 + L1MC4a LINE L1 4448 4716 -1430 715 169 0 8 chr5 110358581 110358705 -92726827 - FLAM_C SINE Alu -20 123 1 455 284 130 27 chr5 110359032 110359331 -92726201 + L1MC4a LINE L1 5632 5961 -1847 478 292 155 0 chr5 110359662 110359823 -92725709 + MER5A DNA MER1_type 4 189 0 24 0 0 0 chr5 110359914 110359938 -92725594 + AT_rich Low_complexity Low_complexity 1 24 0 3770 154 43 58 chr5 110360793 110361362 -92724170 + L1PB4 LINE L1 5223 5799 -357 228 67 0 0 chr5 110361362 110361392 -92724140 + (CA)n Simple_repeat Simple_repeat 2 31 0 3770 154 43 58 chr5 110361392 110361546 -92723986 + L1PB4 LINE L1 5799 5954 -202 2083 107 0 4 chr5 110361546 110361857 -92723675 + AluSc SINE Alu 1 310 0 3770 154 43 58 chr5 110361857 110362075 -92723457 + L1PB4 LINE L1 5954 6154 -2 2292 99 0 0 chr5 110362158 110362451 -92723081 + AluSg SINE Alu 1 293 -17 211 274 0 0 chr5 110364214 110364265 -92721267 + (TG)n Simple_repeat Simple_repeat 2 52 0 1298 192 0 66 chr5 110364307 110364578 -92720954 + AluJb SINE Alu 1 253 -59 384 244 11 0 chr5 110364888 110364978 -92720554 - MER3 DNA MER1_type -118 91 1 195 162 0 0 chr5 110365072 110365109 -92720423 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 24 91 0 0 chr5 110365148 110365214 -92720318 + AT_rich Low_complexity Low_complexity 1 66 0 966 175 24 14 chr5 110366325 110366536 -92718996 - L1MA4 LINE L1 0 6300 6088 2126 63 0 24 chr5 110367402 110367722 -92717810 - AluY SINE Alu 0 313 1 216 361 48 39 chr5 110367728 110367936 -92717596 + L2 LINE L2 2667 2876 -438 320 343 9 0 chr5 110368449 110368554 -92716978 + LTR16A LTR ERVL 63 168 -282 2207 85 0 0 chr5 110369118 110369400 -92716132 - AluY SINE Alu -29 282 1 843 123 0 0 chr5 110369963 110370077 -92715455 - AluSg/x SINE Alu -8 304 191 2316 97 10 0 chr5 110370228 110370536 -92714996 + AluSp SINE Alu 3 313 0 25 0 0 0 chr5 110371454 110371479 -92714053 + AT_rich Low_complexity Low_complexity 1 25 0 206 287 181 0 chr5 110371682 110371776 -92713756 - MIR SINE MIR -84 178 68 357 253 165 22 chr5 110371794 110371963 -92713569 - L1MC5 LINE L1 -49 7912 7768 2453 121 8 6 chr5 110371963 110372326 -92713206 - THE1B LTR MaLR 0 364 1 357 253 165 22 chr5 110372326 110372556 -92712976 - L1MC5 LINE L1 -193 7768 7456 9255 233 45 29 chr5 110372607 110375363 -92710169 + L1 LINE L1 2258 5068 -1078 4007 77 8 0 chr5 110375363 110375886 -92709646 + L1PA6 LINE L1 5616 6142 -12 9255 233 45 29 chr5 110375886 110376075 -92709457 + L1 LINE L1 5068 5252 -894 223 270 0 0 chr5 110377091 110377154 -92708378 + A-rich Low_complexity Low_complexity 1 63 0 345 100 0 0 chr5 110377159 110377209 -92708323 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 2147 121 0 0 chr5 110378004 110378309 -92707223 - AluSg SINE Alu -5 305 1 196 371 0 14 chr5 110378764 110378834 -92706698 + L2 LINE L2 3129 3197 -75 703 171 34 0 chr5 110379229 110379346 -92706186 - LTR12 LTR ERV1 -232 482 362 311 214 0 36 chr5 110379346 110379430 -92706102 - LTR30 LTR ERV1 -98 624 544 746 131 28 71 chr5 110379430 110379656 -92705876 - LTR12 LTR ERV1 -437 277 1 538 143 0 0 chr5 110379951 110380035 -92705497 + LTR12 LTR ERV1 501 584 -130 363 129 0 0 chr5 110380051 110380113 -92705419 + HERV9 LTR ERV1 54 115 -8284 4654 111 45 44 chr5 110380333 110380928 -92704604 - LTR19C LTR ERV1 0 779 181 2622 26 3 0 chr5 110380928 110381234 -92704298 - AluY SINE Alu -4 307 1 4654 111 45 44 chr5 110381234 110381416 -92704116 - LTR19C LTR ERV1 -598 181 1 11010 185 35 41 chr5 110381420 110385516 -92700016 - HUERS-P3b LTR ERV1 -2 6994 3076 2168 120 12 9 chr5 110385524 110385865 -92699667 - LTR19C LTR ERV1 -437 342 1 255 344 113 25 chr5 110386049 110386209 -92699323 + MIR3 SINE MIR 34 207 -1 249 67 0 0 chr5 110388107 110388152 -92697380 - LTR66 LTR ERVL -172 438 394 304 256 24 12 chr5 110388152 110388234 -92697298 + (CATA)n Simple_repeat Simple_repeat 2 84 0 1459 157 0 36 chr5 110388234 110388508 -92697024 + L1MA5 LINE L1 5782 6045 -255 1247 63 0 0 chr5 110388503 110388662 -92696870 - L1P LINE L1 -1514 4632 4474 * 7350 42 0 0 chr5 110388662 110390149 -92695383 + L1PA4 LINE L1 4666 6155 0 1521 132 4 4 chr5 110390149 110390412 -92695120 + L1MA5A LINE L1 6030 6294 -3 249 191 32 16 chr5 110391874 110391937 -92693595 + HsTC2 DNA Tc2 2 65 -1833 328 355 0 0 chr5 110393261 110393385 -92692147 - MIR3 SINE MIR -18 190 67 232 200 0 55 chr5 110393477 110393532 -92692000 + MIR3 SINE MIR 151 202 -6 444 229 10 0 chr5 110394163 110394259 -92691273 + MER81 DNA DNA 15 111 -3 3389 135 2 16 chr5 110394586 110395103 -92690429 + MER1A DNA MER1_type 1 510 -19 2298 29 0 4 chr5 110395836 110396112 -92689420 - L1PA3 LINE L1 0 6155 5881 1427 51 22 1 chr5 110396112 110396304 -92689228 + L1PA3 LINE L1 5723 5924 -259 597 319 32 19 chr5 110397467 110397683 -92687849 + MIR SINE MIR 41 259 -3 25 0 0 0 chr5 110398343 110398368 -92687164 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr5 110398400 110398443 -92687089 + AT_rich Low_complexity Low_complexity 1 43 0 6041 130 29 7 chr5 110399047 110400193 -92685339 - L1PB1 LINE L1 -4 6147 4977 1099 189 71 50 chr5 110400294 110400575 -92684957 + MER46B DNA MER2_type 75 236 0 1902 197 77 25 chr5 110400635 110401152 -92684380 - L1MB7 LINE L1 -13 6171 5628 568 249 41 0 chr5 110401148 110401317 -92684215 + L1M4 LINE L1 3579 3754 -2392 * 615 238 8 0 chr5 110401326 110401452 -92684080 + FLAM_A SINE Alu 6 132 -10 1258 14 14 0 chr5 110401452 110401599 -92683933 - L1PA4 LINE L1 -222 5933 5785 1777 42 0 0 chr5 110401599 110401816 -92683716 + L1PA4 LINE L1 5937 6153 -2 3123 241 83 37 chr5 110401881 110402415 -92683117 - L1M4 LINE L1 -5526 1016 417 180 0 0 0 chr5 110402415 110402435 -92683097 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3123 241 83 37 chr5 110402435 110402865 -92682667 - L1M4 LINE L1 -6125 417 8 8877 207 36 16 chr5 110403531 110404783 -92680749 - L1P LINE L1 -921 5225 3999 2130 94 20 7 chr5 110404783 110405082 -92680450 - AluSc SINE Alu -6 303 1 8877 207 36 16 chr5 110405082 110405334 -92680198 - L1P LINE L1 -2147 3999 3753 525 32 0 0 chr5 110405334 110405397 -92680135 + (TG)n Simple_repeat Simple_repeat 1 63 0 8877 207 36 16 chr5 110405397 110405922 -92679610 - L1P LINE L1 -2393 3753 3155 27 0 0 0 chr5 110406012 110406039 -92679493 + AT_rich Low_complexity Low_complexity 1 27 0 1420 232 3 0 chr5 110406040 110406333 -92679199 - AluJo SINE Alu -16 296 3 586 276 97 88 chr5 110406778 110407275 -92678257 + MLT1H1 LTR MaLR 55 555 0 203 378 14 0 chr5 110407677 110407751 -92677781 + MIR SINE MIR 2 76 -186 830 311 59 13 chr5 110407836 110408295 -92677237 - L1ME3A LINE L1 -195 6044 5565 317 322 65 35 chr5 110408398 110408628 -92676904 - MER21-int LTR ERV1 -1013 3178 2942 355 229 110 77 chr5 110409521 110409738 -92675794 - HERVL66 LTR ERVL -2153 3332 868 2142 108 7 0 chr5 110411062 110411357 -92674175 + AluSg SINE Alu 1 297 -13 1011 256 34 3 chr5 110412530 110412854 -92672678 - L1ME3A LINE L1 -1338 4877 4544 258 32 0 0 chr5 110412927 110412958 -92672574 + (CA)n Simple_repeat Simple_repeat 2 32 0 209 356 23 0 chr5 110413109 110413196 -92672336 + CT-rich Low_complexity Low_complexity 4 92 0 733 283 155 5 chr5 110413272 110413671 -92671861 - L1ME3A LINE L1 -5124 1272 814 * 3408 200 32 21 chr5 110413660 110413674 -92671858 + L1P3 LINE L1 1005 1017 -5434 6331 106 4 2 chr5 110413674 110415600 -92669932 - L1PA12 LINE L1 0 6168 4246 3408 200 32 21 chr5 110415600 110416509 -92669023 + L1P3 LINE L1 1017 1940 -4511 * 9359 183 20 3 chr5 110416503 110418326 -92667206 + L1P3 LINE L1 2697 4551 -1910 1152 257 39 3 chr5 110418323 110418654 -92666878 - L1ME3A LINE L1 -5569 827 485 * 449 271 77 13 chr5 110418668 110418823 -92666709 - L1ME3A LINE L1 -6196 200 36 6465 234 52 65 chr5 110418823 110421209 -92664323 - Charlie6 DNA MER1_type -908 2592 150 21 0 0 0 chr5 110421237 110421258 -92664274 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 110421400 110421432 -92664100 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 * 261 146 0 0 chr5 110421431 110421479 -92664053 + (TA)n Simple_repeat Simple_repeat 1 48 0 424 340 91 43 chr5 110421690 110421966 -92663566 + L2 LINE L2 2149 2449 -865 1129 272 83 3 chr5 110421966 110422304 -92663228 - MLT1A1 LTR MaLR 0 365 1 424 340 91 43 chr5 110422304 110422400 -92663132 + L2 LINE L2 2449 2539 -775 186 333 14 14 chr5 110422474 110422543 -92662989 + L2 LINE L2 2738 2806 -508 1745 164 35 57 chr5 110422833 110423205 -92662327 + THE1B LTR MaLR 1 364 0 272 345 12 0 chr5 110423208 110423292 -92662240 + L2 LINE L2 3228 3312 -1 5974 177 15 2 chr5 110423620 110425609 -92659923 - L1PA14 LINE L1 -5 7594 5609 517 185 11 0 chr5 110425609 110425701 -92659831 - L1PA14 LINE L1 -7483 98 6 199 278 153 0 chr5 110427128 110427200 -92658332 - L2 LINE L2 -2 3270 3188 25 0 0 0 chr5 110427763 110427788 -92657744 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 110427798 110427820 -92657712 + AT_rich Low_complexity Low_complexity 1 22 0 508 194 24 6 chr5 110431156 110431326 -92654206 + (TA)n Simple_repeat Simple_repeat 1 173 0 214 324 81 18 chr5 110432037 110432148 -92653384 + MIR SINE MIR 131 248 -14 188 307 53 13 chr5 110432518 110432593 -92652939 + L2 LINE L2 3181 3258 -55 636 344 91 10 chr5 110433238 110433645 -92651887 + LTR16A1 LTR ERVL 16 455 -2 267 374 27 14 chr5 110433969 110434188 -92651344 + HERV16 LTR ERVL 330 551 -4445 903 132 0 0 chr5 110434220 110434356 -92651176 + L1PA15 LINE L1 6017 6152 -13 3043 127 19 0 chr5 110434368 110434841 -92650691 + L1PA15 LINE L1 5681 6162 -3 411 261 63 28 chr5 110434844 110434986 -92650546 + HERV16 LTR ERVL 559 705 -4291 1182 275 77 26 chr5 110435550 110436005 -92649527 + MER74B LTR ERVL 70 547 -75 302 265 20 20 chr5 110435923 110436021 -92649511 - MER88 LTR ERVL -288 176 79 * 25 51 0 0 chr5 110436980 110437019 -92648513 + AT_rich Low_complexity Low_complexity 1 39 0 30 0 0 0 chr5 110437281 110437311 -92648221 + AT_rich Low_complexity Low_complexity 1 30 0 2469 89 0 0 chr5 110437789 110438102 -92647430 - AluSq SINE Alu 0 313 1 741 187 40 14 chr5 110438406 110438682 -92646850 + MLT1A1 LTR MaLR 1 426 -2 3113 225 64 55 chr5 110438682 110439576 -92645956 + MLT1A1-int LTR MaLR 16 989 -382 1752 191 0 0 chr5 110439576 110439875 -92645657 + AluSx SINE Alu 1 299 -13 3113 225 64 55 chr5 110439875 110440261 -92645271 + MLT1A1-int LTR MaLR 989 1370 -1 1613 219 29 6 chr5 110440272 110440619 -92644913 + MLT1A1 LTR MaLR 11 365 0 2245 105 0 10 chr5 110441105 110441419 -92644113 + AluSx SINE Alu 1 311 -1 519 84 0 0 chr5 110441499 110441570 -92643962 + L1PA5 LINE L1 6082 6152 -2 6401 31 0 8 chr5 110441960 110442728 -92642804 + L1PA3 LINE L1 5387 6148 -7 961 278 45 21 chr5 110442833 110443214 -92642318 + L1M4 LINE L1 4882 5271 -875 4745 46 0 2 chr5 110443593 110444177 -92641355 + L1PA4 LINE L1 5572 6154 -1 24 0 0 0 chr5 110444608 110444632 -92640900 + AT_rich Low_complexity Low_complexity 1 24 0 548 289 20 20 chr5 110444830 110444979 -92640553 + MIR SINE MIR 12 160 -102 28 48 0 0 chr5 110445066 110445108 -92640424 + AT_rich Low_complexity Low_complexity 1 42 0 213 313 12 25 chr5 110445283 110445363 -92640169 + L2 LINE L2 3230 3308 -5 25 0 0 0 chr5 110446691 110446716 -92638816 + AT_rich Low_complexity Low_complexity 1 25 0 49 43 0 0 chr5 110446799 110446869 -92638663 + AT_rich Low_complexity Low_complexity 1 70 0 307 277 79 0 chr5 110446895 110446996 -92638536 - L1ME3A LINE L1 -8 6162 6054 356 240 47 101 chr5 110446997 110447126 -92638406 - L2 LINE L2 0 3272 3151 816 256 39 138 chr5 110447282 110447817 -92637715 + L2 LINE L2 2831 3312 -1 22 0 0 0 chr5 110448602 110448624 -92636908 + AT_rich Low_complexity Low_complexity 1 22 0 296 229 12 12 chr5 110449193 110449276 -92636256 - MER67D LTR ERV1 -1 513 431 * 659 255 16 35 chr5 110449247 110449512 -92636020 - MER31B LTR ERV1 -76 390 20 5518 112 9 1 chr5 110449636 110450452 -92635080 - L1PA13 LINE L1 0 6163 5342 338 109 0 0 chr5 110450452 110450507 -92635025 + L1P LINE L1 5286 5340 -815 929 292 104 25 chr5 110451176 110451607 -92633925 + L2 LINE L2 2849 3313 0 192 371 162 29 chr5 110454036 110454351 -92631181 - L2 LINE L2 0 3272 2916 314 345 114 44 chr5 110454943 110455259 -92630273 - L2 LINE L2 -353 2961 2624 394 348 105 38 chr5 110455327 110455718 -92629814 - L2 LINE L2 -649 2665 2249 387 0 0 0 chr5 110455719 110455762 -92629770 + (CA)n Simple_repeat Simple_repeat 2 44 0 403 162 40 0 chr5 110456977 110457051 -92628481 - AluJb SINE Alu -16 296 220 449 169 0 0 chr5 110457060 110457143 -92628389 - AluJb SINE Alu -166 146 64 6053 165 26 12 chr5 110457256 110457559 -92627973 - L1P4 LINE L1 -493 7106 6809 2115 96 0 0 chr5 110457559 110457831 -92627701 - AluY SINE Alu -39 272 1 6053 165 26 12 chr5 110457831 110459156 -92626376 - L1P4 LINE L1 -790 6809 5367 * 11387 191 17 11 chr5 110459145 110462614 -92622918 - L1P4 LINE L1 -3276 4308 1 1508 132 4 4 chr5 110462651 110462879 -92622653 - AluSg/x SINE Alu -1 309 82 540 300 58 51 chr5 110462880 110463055 -92622477 - L1MEc LINE L1 -4680 1716 1544 280 0 24 24 chr5 110463055 110463096 -92622436 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1928 120 4 4 chr5 110463096 110463370 -92622162 - AluSc SINE Alu -35 274 1 540 300 58 51 chr5 110463370 110463643 -92621889 - L1MEc LINE L1 -4851 1545 1264 1957 169 120 5 chr5 110463733 110464117 -92621415 + MSTA LTR MaLR 1 428 0 2549 114 5 5 chr5 110464119 110464504 -92621028 + MSTA-int LTR MaLR 3 387 -1193 342 179 13 13 chr5 110464504 110464582 -92620950 + MSTA-int LTR MaLR 1574 1651 0 1669 159 164 16 chr5 110464582 110464954 -92620578 + MSTA LTR MaLR 2 428 0 742 302 128 43 chr5 110465599 110466044 -92619488 + MLT1H1 LTR MaLR 11 495 -72 318 336 0 35 chr5 110466094 110466237 -92619295 + MLT1H1-int LTR MaLR 10 147 -1224 5322 154 42 6 chr5 110467048 110468013 -92617519 + L1MA5 LINE L1 5302 6300 0 238 301 67 87 chr5 110468077 110468423 -92617109 + MLT1F1-int LTR MaLR 1392 1730 -5 912 269 95 50 chr5 110468433 110468949 -92616583 + MLT1F1 LTR MaLR 14 552 -15 251 320 57 46 chr5 110469015 110469376 -92616156 + L1MEc LINE L1 34 268 -5937 583 314 48 7 chr5 110469742 110470178 -92615354 + L1M4 LINE L1 3117 3570 -2576 242 218 0 0 chr5 110470234 110470289 -92615243 + L1ME3 LINE L1 6082 6136 -26 420 214 27 54 chr5 110470347 110470459 -92615073 - MLT1E LTR MaLR 0 593 485 788 242 92 61 chr5 110470763 110471188 -92614344 - MLT1E LTR MaLR -59 534 3 900 119 62 12 chr5 110471683 110471843 -92613689 + L1PA7 LINE L1 5987 6154 0 1445 149 145 4 chr5 110471911 110472187 -92613345 + MSTA LTR MaLR 114 428 0 7872 189 19 36 chr5 110472188 110473868 -92611664 + MSTA-int LTR MaLR 2 1651 0 2235 134 89 2 chr5 110473868 110474262 -92611270 + MSTA LTR MaLR 1 428 0 312 404 13 9 chr5 110474538 110474763 -92610769 + L2 LINE L2 2637 2862 -452 230 350 73 91 chr5 110474852 110475138 -92610394 + L2 LINE L2 2954 3234 -38 232 184 41 0 chr5 110477495 110477544 -92607988 + L1ME LINE L1 5621 5671 -499 1786 280 62 32 chr5 110478564 110479353 -92606179 + L1ME3A LINE L1 5292 6104 -66 1284 151 65 140 chr5 110479415 110479766 -92605766 + MER7A DNA MER2_type 2 324 -22 1992 164 17 55 chr5 110479806 110480109 -92605423 - MLT1B LTR MaLR 0 390 104 1936 125 17 47 chr5 110480109 110480469 -92605063 - L1MA2 LINE L1 0 6304 5956 1992 164 17 55 chr5 110480469 110480568 -92604964 - MLT1B LTR MaLR -286 104 3 23 54 0 0 chr5 110480620 110480657 -92604875 + AT_rich Low_complexity Low_complexity 1 37 0 201 245 0 19 chr5 110481764 110481817 -92603715 + CT-rich Low_complexity Low_complexity 1 52 0 1708 206 23 5 chr5 110481942 110482326 -92603206 - L1MB2 LINE L1 -4 6167 5777 275 119 24 0 chr5 110482334 110482376 -92603156 - L1MC1 LINE L1 -31 6302 6260 654 165 9 0 chr5 110482379 110482488 -92603044 - MLT2A2 LTR ERVL -161 292 183 1195 148 36 0 chr5 110482489 110482712 -92602820 - L1MB2 LINE L1 -846 5487 5257 * 2963 195 34 130 chr5 110482690 110483886 -92601646 - L1 LINE L1 -812 5334 4254 344 145 0 13 chr5 110484949 110485025 -92600507 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 239 172 35 17 chr5 110485025 110485083 -92600449 + CT-rich Low_complexity Low_complexity 1 59 0 1914 216 33 26 chr5 110485116 110485570 -92599962 + MSTB2 LTR MaLR 1 457 0 343 262 48 78 chr5 110485738 110485944 -92599588 - L1MC/D LINE L1 -2332 5476 5277 195 294 65 76 chr5 110486384 110486568 -92598964 - L3b LINE CR1 -114 1469 1288 868 231 54 161 chr5 110486725 110487167 -92598365 - L1MD2 LINE L1 -8 6234 5840 561 317 121 56 chr5 110487191 110487431 -92598101 - LTR16A LTR ERVL -18 432 164 1502 84 44 35 chr5 110487431 110487657 -92597875 - MER30 DNA MER1_type 0 230 3 561 317 121 56 chr5 110487657 110487738 -92597794 - LTR16A LTR ERVL -286 164 90 21 0 0 0 chr5 110488098 110488119 -92597413 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr5 110489250 110489283 -92596249 + AT_rich Low_complexity Low_complexity 1 33 0 359 333 8 8 chr5 110489448 110489580 -92595952 + Charlie8 DNA MER1_type 1 132 -2285 1498 161 69 72 chr5 110489738 110490087 -92595445 + MLT1B LTR MaLR 1 348 -42 273 136 136 0 chr5 110490130 110490189 -92595343 + MLT1B LTR MaLR 324 390 0 39 60 0 0 chr5 110490307 110490374 -92595158 + AT_rich Low_complexity Low_complexity 1 67 0 349 326 30 7 chr5 110492377 110492512 -92593020 - L2 LINE L2 -8 3305 3168 2130 41 0 4 chr5 110494233 110494501 -92591031 + L1PA4 LINE L1 5886 6152 -3 12858 167 28 10 chr5 110494902 110495697 -92589835 + Tigger1 DNA MER2_type 1 780 -1638 2733 10 0 0 chr5 110495697 110495999 -92589533 + AluYb8 SINE Alu 1 302 -16 12858 167 28 10 chr5 110495999 110497549 -92587983 + Tigger1 DNA MER2_type 780 2388 -30 389 277 10 0 chr5 110497857 110497958 -92587574 + LTR16C LTR ERVL 390 491 0 21 36 0 0 chr5 110499236 110499264 -92586268 + AT_rich Low_complexity Low_complexity 1 28 0 532 341 121 39 chr5 110499958 110500722 -92584810 + L2 LINE L2 2449 3272 0 185 328 31 0 chr5 110500763 110500827 -92584705 + L2 LINE L2 3243 3308 -5 22 0 0 0 chr5 110501239 110501261 -92584271 + AT_rich Low_complexity Low_complexity 1 22 0 2022 138 10 0 chr5 110501435 110501726 -92583806 - AluSx SINE Alu -18 294 1 269 254 42 28 chr5 110502470 110502541 -92582991 + L1MEd LINE L1 602 673 -5446 10674 168 107 13 chr5 110502967 110504091 -92581441 - L1MA1 LINE L1 0 7721 6704 4695 29 2 0 chr5 110504091 110504646 -92580886 - L1PA3 LINE L1 -3 6152 5597 10674 168 107 13 chr5 110504646 110505009 -92580523 - L1MA1 LINE L1 -1017 6704 6376 1967 163 0 0 chr5 110505009 110505310 -92580222 - AluSq SINE Alu -12 301 1 10674 168 107 13 chr5 110505310 110505591 -92579941 - L1MA1 LINE L1 -1345 6376 6123 315 0 0 0 chr5 110505591 110505626 -92579906 + (TG)n Simple_repeat Simple_repeat 2 36 0 10674 168 107 13 chr5 110505626 110506280 -92579252 - L1MA1 LINE L1 -1598 6123 5532 7604 29 4 4 chr5 110506280 110507275 -92578257 - L1PA3 LINE L1 -3 6152 5158 10674 168 107 13 chr5 110507275 110509047 -92576485 - L1MA1 LINE L1 -2189 5532 3928 1771 180 3 0 chr5 110509047 110509352 -92576180 - AluJb SINE Alu -6 306 1 10674 168 107 13 chr5 110509352 110509568 -92575964 - L1MA1 LINE L1 -3793 3928 3734 183 100 0 0 chr5 110509568 110509598 -92575934 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 10674 168 107 13 chr5 110509598 110509833 -92575699 - L1MA1 LINE L1 -3987 3734 2625 7338 43 4 1 chr5 110509831 110510756 -92574776 + L1PA5 LINE L1 2113 3040 -3106 * 1414 62 0 0 chr5 110510779 110510957 -92574575 - L1PA5 LINE L1 -1515 4631 4454 7212 44 1 4 chr5 110510957 110512479 -92573053 + L1PA5 LINE L1 4634 6152 -2 11818 191 78 21 chr5 110512481 110513845 -92571687 - L1MA1 LINE L1 -4944 2621 1336 2728 13 0 0 chr5 110513845 110514146 -92571386 - AluY SINE Alu -10 301 1 11818 191 78 21 chr5 110514146 110515255 -92570277 - L1MA1 LINE L1 -6229 1336 7 1808 277 65 14 chr5 110515336 110515978 -92569554 - L1ME2 LINE L1 -8 6156 5482 802 188 73 41 chr5 110515999 110516217 -92569315 - MLT1A1 LTR MaLR -140 225 1 1629 266 76 66 chr5 110516262 110516999 -92568533 - L1ME2 LINE L1 -1503 4643 3849 287 163 0 0 chr5 110516999 110517042 -92568490 + 5S rRNA rRNA 1 43 -78 1629 266 76 66 chr5 110517042 110517299 -92568233 - L1ME2 LINE L1 -2297 3849 3596 1043 163 81 0 chr5 110517300 110517509 -92568023 + Tigger5 DNA MER2_type 2096 2321 -2 369 62 0 0 chr5 110517509 110517557 -92567975 + (TG)n Simple_repeat Simple_repeat 1 48 0 1693 296 55 64 chr5 110518233 110519261 -92566271 + L1MCc LINE L1 48 1065 -5358 26 0 0 0 chr5 110519269 110519295 -92566237 + AT_rich Low_complexity Low_complexity 1 26 0 2124 129 3 3 chr5 110520912 110521215 -92564317 + AluSx SINE Alu 1 303 -9 623 243 168 14 chr5 110521701 110521915 -92563617 - MIR SINE MIR -11 251 5 598 279 45 50 chr5 110522032 110522254 -92563278 - MLT1E3 LTR MaLR -138 486 266 895 205 183 44 chr5 110522265 110522494 -92563038 + MLT1E LTR MaLR 364 593 0 562 275 56 0 chr5 110522495 110522796 -92562736 + MLT1E-int LTR MaLR 2 434 -937 420 200 55 0 chr5 110522797 110522880 -92562652 + MER8 DNA MER2_type 12 97 -142 420 178 0 14 chr5 110522881 110522954 -92562578 + MER8 DNA MER2_type 168 239 0 636 170 111 0 chr5 110522957 110523092 -92562440 + MLT1E-int LTR MaLR 438 587 -784 1506 268 41 70 chr5 110523519 110524079 -92561453 + MLT1E LTR MaLR 50 593 0 182 376 0 17 chr5 110525028 110525145 -92560387 - MER5B DNA MER1_type -60 118 4 262 308 240 0 chr5 110525200 110525304 -92560228 - MER5A DNA MER1_type 0 189 61 397 341 37 6 chr5 110525895 110526059 -92559473 + MIR SINE MIR 22 190 -72 1735 196 103 46 chr5 110527683 110528158 -92557374 + MER67D LTR ERV1 13 514 0 30 59 0 0 chr5 110528667 110528718 -92556814 + AT_rich Low_complexity Low_complexity 1 51 0 33 43 0 0 chr5 110528884 110528931 -92556601 + AT_rich Low_complexity Low_complexity 1 47 0 232 330 20 50 chr5 110529549 110529649 -92555883 - L2 LINE L2 0 3272 3176 198 91 0 0 chr5 110530023 110530056 -92555476 + (GA)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chr5 110531058 110531086 -92554446 + (CAA)n Simple_repeat Simple_repeat 3 30 0 2007 138 6 28 chr5 110532035 110532398 -92553134 - THE1A LTR MaLR 0 355 1 6505 65 4 20 chr5 110532840 110533885 -92551647 + L1PA7 LINE L1 4448 5470 -684 1883 127 6 51 chr5 110533885 110534201 -92551331 + AluSx SINE Alu 1 302 -10 6505 65 4 20 chr5 110534201 110534869 -92550663 + L1PA7 LINE L1 5470 6147 -7 210 393 41 16 chr5 110535717 110535839 -92549693 + MER5A DNA MER1_type 62 186 -3 567 198 66 0 chr5 110536544 110536665 -92548867 + L1MA5 LINE L1 4929 5057 -1089 3026 136 8 28 chr5 110536666 110537056 -92548476 + L1MA5 LINE L1 5217 5593 -707 5314 201 12 7 chr5 110537056 110539067 -92546465 + L1PA15 LINE L1 4126 6161 -4 3026 136 8 28 chr5 110539067 110539260 -92546272 + L1MA5 LINE L1 5593 5788 -512 254 65 0 0 chr5 110539260 110539306 -92546226 - LTR66 LTR ERVL -171 439 394 304 256 24 12 chr5 110539306 110539388 -92546144 + (CATA)n Simple_repeat Simple_repeat 2 84 0 1459 157 0 36 chr5 110539388 110539662 -92545870 + L1MA5 LINE L1 5782 6045 -255 1247 63 0 0 chr5 110539657 110539816 -92545716 - L1P LINE L1 -1514 4632 4474 * 7143 41 3 5 chr5 110539816 110541299 -92544233 + L1PA4 LINE L1 4666 6150 -5 1223 126 19 48 chr5 110541312 110541583 -92543949 + L1MA5 LINE L1 6033 6295 -5 249 191 32 16 chr5 110543047 110543110 -92542422 + HsTC2 DNA Tc2 2 65 -1833 328 355 0 0 chr5 110544434 110544558 -92540974 - MIR3 SINE MIR -18 190 67 232 200 0 55 chr5 110544650 110544705 -92540827 + MIR3 SINE MIR 151 202 -6 444 229 10 0 chr5 110545336 110545432 -92540100 + MER81 DNA DNA 15 111 -3 3410 133 2 16 chr5 110545759 110546276 -92539256 + MER1A DNA MER1_type 1 510 -19 2355 25 0 0 chr5 110547010 110547285 -92538247 - L1PA3 LINE L1 0 6155 5881 1427 51 22 1 chr5 110547285 110547477 -92538055 + L1PA3 LINE L1 5723 5924 -259 613 315 32 19 chr5 110548640 110548856 -92536676 + MIR SINE MIR 41 259 -3 25 0 0 0 chr5 110549516 110549541 -92535991 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr5 110549573 110549616 -92535916 + AT_rich Low_complexity Low_complexity 1 43 0 6041 157 22 3 chr5 110550220 110551912 -92533620 - L1PB1 LINE L1 -4 6147 4427 7895 26 1 0 chr5 110553126 110554059 -92531473 - L1P LINE L1 -1565 4581 3648 852 47 0 0 chr5 110554058 110554165 -92531367 + L1P LINE L1 4580 4686 -1460 * 581 349 66 18 chr5 110554988 110555323 -92530209 + L2 LINE L2 844 1194 -2120 802 246 97 52 chr5 110555353 110555682 -92529850 - L2 LINE L2 -4 3309 2966 684 273 68 99 chr5 110555677 110556274 -92529258 + L2 LINE L2 2736 3312 -1 * 267 315 142 24 chr5 110556271 110556398 -92529134 - L2 LINE L2 -341 2972 2831 * 381 341 16 0 chr5 110556917 110557043 -92528489 - LTR16C LTR ERVL -295 196 69 315 94 0 38 chr5 110557236 110557289 -92528243 + L1MA4 LINE L1 5652 5702 -602 * 366 159 0 0 chr5 110557282 110557345 -92528187 + L1PA15 LINE L1 6070 6132 -33 3096 158 26 4 chr5 110557346 110557890 -92527642 + L1PA15 LINE L1 5604 6159 -6 1800 166 22 11 chr5 110557890 110558241 -92527291 + L1MA4 LINE L1 5936 6294 -6 23 33 0 0 chr5 110558304 110558334 -92527198 + AT_rich Low_complexity Low_complexity 1 30 0 748 276 74 21 chr5 110558859 110559102 -92526430 + MIR SINE MIR 4 259 -3 258 281 56 34 chr5 110559254 110559343 -92526189 - Charlie8 DNA MER1_type -2326 91 1 337 266 211 0 chr5 110559688 110559816 -92525716 - MER5A DNA MER1_type 0 189 35 253 259 17 0 chr5 110559836 110559894 -92525638 - MER69 DNA AcHobo -93 84 26 24 0 0 0 chr5 110561301 110561325 -92524207 + AT_rich Low_complexity Low_complexity 1 24 0 313 253 0 53 chr5 110562010 110562105 -92523427 - L1MC4 LINE L1 -1339 6703 6614 247 172 0 31 chr5 110562110 110562174 -92523358 + (TA)n Simple_repeat Simple_repeat 2 63 0 232 200 44 44 chr5 110562174 110562264 -92523268 - L1MC4 LINE L1 -1339 6703 6614 218 103 0 26 chr5 110562265 110562304 -92523228 + (TATATG)n Simple_repeat Simple_repeat 3 40 0 300 275 11 22 chr5 110562308 110562399 -92523133 - L1MC4 LINE L1 -1339 6703 6614 305 226 17 70 chr5 110562408 110562523 -92523009 - L1MC4 LINE L1 -1339 6703 6595 22 35 0 0 chr5 110562526 110562555 -92522977 + AT_rich Low_complexity Low_complexity 1 29 0 189 405 34 21 chr5 110562771 110563008 -92522524 - MIR SINE MIR 0 262 23 22 0 0 0 chr5 110563649 110563671 -92521861 + AT_rich Low_complexity Low_complexity 1 22 0 208 338 92 28 chr5 110565359 110565501 -92520031 - MIR SINE MIR -51 211 61 236 200 0 0 chr5 110566038 110566088 -92519444 + (TTA)n Simple_repeat Simple_repeat 1 50 0 229 290 0 0 chr5 110567355 110567424 -92518108 + A-rich Low_complexity Low_complexity 1 69 0 205 330 70 0 chr5 110567854 110567969 -92517563 + MIR SINE MIR 26 148 -114 297 292 71 39 chr5 110568298 110568452 -92517080 - MLT2E LTR ERVL -417 211 53 696 142 17 34 chr5 110568813 110568989 -92516543 + GA-rich Low_complexity Low_complexity 3 175 0 183 273 0 0 chr5 110569336 110569380 -92516152 - L2 LINE L2 -12 3260 3217 2142 131 0 0 chr5 110571132 110571438 -92514094 + AluSg SINE Alu 1 306 -4 2109 108 0 27 chr5 110571455 110571751 -92513781 + AluSg SINE Alu 7 294 -16 213 343 0 14 chr5 110572351 110572424 -92513108 + MIR SINE MIR 82 153 -109 21 0 0 0 chr5 110572862 110572883 -92512649 + AT_rich Low_complexity Low_complexity 1 21 0 643 251 70 96 chr5 110573001 110573287 -92512245 + L1MC5 LINE L1 6694 6967 -994 4929 86 7 10 chr5 110573287 110573976 -92511556 + L1PA13 LINE L1 5476 6162 -1 643 251 70 96 chr5 110573976 110574104 -92511428 + L1MC5 LINE L1 6967 7097 -864 509 282 29 29 chr5 110575229 110575399 -92510133 + MER5A DNA MER1_type 7 176 -13 546 209 6 87 chr5 110576759 110576822 -92508710 + L1MB7 LINE L1 4553 4620 -1526 1767 172 0 0 chr5 110576822 110577130 -92508402 + AluJb SINE Alu 1 308 0 546 209 6 87 chr5 110577130 110577237 -92508295 + L1MB7 LINE L1 4620 4710 -1436 23 0 0 0 chr5 110577252 110577275 -92508257 + AT_rich Low_complexity Low_complexity 1 23 0 1733 202 83 5 chr5 110577275 110577671 -92507861 + L1MB7 LINE L1 5385 5811 -355 545 248 72 52 chr5 110577698 110578005 -92507527 + pTR5 LTR ERV1 743 1055 -1383 4057 98 83 11 chr5 110578049 110578691 -92506841 + LTR12 LTR ERV1 1 688 0 792 254 46 40 chr5 110578703 110579030 -92506502 + L1MB7 LINE L1 5826 6154 -30 1502 204 3 14 chr5 110579105 110579427 -92506105 + AluJo SINE Alu 1 319 0 2087 99 3 0 chr5 110579434 110579718 -92505814 - AluSg SINE Alu -4 306 22 765 218 137 98 chr5 110581212 110581398 -92504134 + MER41C LTR ERV1 1 178 -376 2328 85 0 7 chr5 110581398 110581703 -92503829 - AluY SINE Alu -6 305 3 765 218 137 98 chr5 110581703 110582049 -92503483 + MER41C LTR ERV1 178 554 0 27 29 0 0 chr5 110582140 110582174 -92503358 + AT_rich Low_complexity Low_complexity 1 34 0 32 26 0 0 chr5 110582209 110582248 -92503284 + AT_rich Low_complexity Low_complexity 1 39 0 387 307 22 45 chr5 110582920 110583099 -92502433 - MIR SINE MIR -57 205 31 840 323 48 22 chr5 110583100 110583512 -92502020 - LTR16B LTR ERVL 0 464 42 2131 127 0 0 chr5 110583936 110584255 -92501277 + AluSx SINE Alu 1 319 0 2153 117 0 13 chr5 110584582 110584889 -92500643 - AluSq SINE Alu -1 312 10 264 362 39 8 chr5 110584983 110585110 -92500422 + L2 LINE L2 2574 2704 -610 574 298 223 3 chr5 110585249 110585608 -92499924 + LTR41 LTR ERVL 3 440 -333 3500 149 84 33 chr5 110585639 110586302 -92499230 + MER44D DNA MER2_type 9 705 0 828 262 69 63 chr5 110586319 110586681 -92498851 + LTR41 LTR ERVL 409 772 -1 224 396 27 13 chr5 110587042 110587191 -92498341 - L2 LINE L2 0 3272 3122 898 290 86 21 chr5 110590027 110590455 -92495077 + L1MC4a LINE L1 5460 5915 -1893 21 57 0 0 chr5 110590523 110590558 -92494974 + AT_rich Low_complexity Low_complexity 1 35 0 10687 214 36 17 chr5 110590735 110591292 -92494240 - L1PA16 LINE L1 -1 6165 5620 1202 172 117 76 chr5 110591292 110591582 -92493950 - AluJb SINE Alu 0 302 1 10687 214 36 17 chr5 110591582 110592101 -92493431 - L1PA16 LINE L1 -546 5620 5112 231 36 0 0 chr5 110592101 110592129 -92493403 + (TTA)n Simple_repeat Simple_repeat 3 30 0 4056 70 8 0 chr5 110592129 110592646 -92492886 - L1PA6 LINE L1 -18 6136 5616 10687 214 36 17 chr5 110592646 110595407 -92490125 - L1PA16 LINE L1 -1053 5113 2262 453 241 173 28 chr5 110595459 110595688 -92489844 + L1MC5 LINE L1 7457 7652 -309 2424 111 19 6 chr5 110595688 110596047 -92489485 + THE1B LTR MaLR 1 364 0 453 241 173 28 chr5 110596047 110596211 -92489321 + L1MC5 LINE L1 7652 7907 -54 188 314 20 0 chr5 110596234 110596285 -92489247 + MIR SINE MIR 68 119 -143 2261 104 10 0 chr5 110597462 110597769 -92487763 - AluSp SINE Alu -2 311 2 727 124 15 36 chr5 110599093 110599230 -92486302 + AluY SINE Alu 163 296 -15 1482 225 14 29 chr5 110599230 110599505 -92486027 + MLT1A2 LTR MaLR 34 305 -69 2051 144 30 0 chr5 110599505 110599803 -92485729 - AluJb SINE Alu -3 309 3 1482 225 14 29 chr5 110599803 110599873 -92485659 + MLT1A2 LTR MaLR 305 374 0 978 194 24 10 chr5 110599893 110600037 -92485495 + MER3 DNA MER1_type 1 150 -59 2471 77 0 0 chr5 110600037 110600347 -92485185 - AluY SINE Alu -1 310 1 978 194 24 10 chr5 110600347 110600408 -92485124 + MER3 DNA MER1_type 150 209 0 29 47 0 0 chr5 110600955 110600998 -92484534 + AT_rich Low_complexity Low_complexity 1 43 0 956 225 144 38 chr5 110601737 110602348 -92483184 + LTR41 LTR ERVL 1 761 -12 441 256 0 85 chr5 110603355 110603474 -92482058 + MIR3 SINE MIR 12 115 -93 2413 81 0 0 chr5 110603474 110603771 -92481761 - AluSg SINE Alu -13 297 1 441 256 0 85 chr5 110603771 110603815 -92481717 + MIR3 SINE MIR 115 161 -47 293 256 96 40 chr5 110603869 110603994 -92481538 + MIR SINE MIR 105 236 -26 2319 74 0 0 chr5 110604161 110604446 -92481086 + AluY SINE Alu 1 285 -26 234 0 0 0 chr5 110604446 110604472 -92481060 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2289 75 0 0 chr5 110604983 110605265 -92480267 + AluY SINE Alu 1 282 -29 787 224 51 20 chr5 110605525 110605721 -92479811 - MER58C DNA MER1_type -3 212 11 684 289 50 0 chr5 110605838 110606056 -92479476 - L1MC/D LINE L1 -2090 5718 5490 2150 128 0 0 chr5 110606085 110606382 -92479150 + AluSx SINE Alu 1 297 -15 323 277 70 12 chr5 110606447 110606619 -92478913 - L1MC/D LINE L1 -670 5496 5317 659 204 105 30 chr5 110606994 110607782 -92477750 + L1ME1 LINE L1 5204 6204 -5 180 0 0 0 chr5 110607833 110607853 -92477679 + (A)n Simple_repeat Simple_repeat 1 20 0 2127 108 20 0 chr5 110607951 110608246 -92477286 + AluSx SINE Alu 1 301 -11 680 279 24 49 chr5 110608419 110608666 -92476866 - MIR SINE MIR -13 249 9 23 0 0 0 chr5 110609136 110609159 -92476373 + AT_rich Low_complexity Low_complexity 1 23 0 485 249 16 60 chr5 110609473 110609658 -92475874 - L2 LINE L2 -140 3173 2997 3818 86 2 4 chr5 110609798 110610310 -92475222 + MER9 LTR ERVK 1 511 0 314 313 95 114 chr5 110610725 110610911 -92474621 + L3 LINE CR1 421 609 -968 2319 102 0 0 chr5 110610911 110611214 -92474318 + AluSq SINE Alu 5 307 -6 314 313 95 114 chr5 110611214 110611439 -92474093 + L3 LINE CR1 609 824 -753 2076 131 0 0 chr5 110611455 110611779 -92473753 - AluSc SINE Alu 0 309 1 784 241 39 20 chr5 110611947 110612150 -92473382 - MER3 DNA MER1_type -1 208 2 2317 100 3 0 chr5 110612292 110612601 -92472931 + AluSp SINE Alu 1 310 -3 276 175 0 0 chr5 110612606 110612669 -92472863 + (CA)n Simple_repeat Simple_repeat 2 64 0 350 219 55 0 chr5 110612678 110612751 -92472781 + MER58C DNA MER1_type 138 214 -1 1748 198 67 82 chr5 110612866 110613190 -92472342 + L1MC3 LINE L1 6382 6709 -1076 4371 48 4 2 chr5 110613190 110613735 -92471797 + L1PA7 LINE L1 5598 6143 -11 1748 198 67 82 chr5 110613735 110613853 -92471679 + L1MC3 LINE L1 6709 6827 -958 2133 103 7 0 chr5 110613853 110614161 -92471371 - AluSq SINE Alu 0 312 3 1748 198 67 82 chr5 110614161 110614301 -92471231 + L1MC3 LINE L1 6827 6957 -828 249 264 22 33 chr5 110614328 110614419 -92471113 + MLT1F1 LTR MaLR 36 125 -442 1995 186 94 11 chr5 110614473 110614920 -92470612 + L1MD3 LINE L1 7506 7989 -6 1238 223 49 88 chr5 110614979 110615525 -92470007 + L1MC4 LINE L1 6625 7117 -844 13077 49 8 0 chr5 110615525 110617941 -92467591 - L1PA5 LINE L1 0 6154 3726 430 51 0 0 chr5 110617941 110618000 -92467532 + L1PA5 LINE L1 3674 3732 -2414 * 907 293 15 15 chr5 110617991 110618326 -92467206 + L1MC4 LINE L1 7096 7430 -612 1920 144 11 57 chr5 110618396 110618749 -92466783 + MER1B DNA MER1_type 1 337 0 2057 137 0 13 chr5 110618825 110619140 -92466392 + AluJb SINE Alu 1 311 -1 8903 55 0 8 chr5 110619349 110620478 -92465054 - L1P LINE L1 -5021 1125 6 1137 216 132 51 chr5 110620593 110620992 -92464540 - MLT1E1 LTR MaLR 0 654 117 625 273 44 11 chr5 110621697 110621880 -92463652 + MLT1H LTR MaLR 359 547 -2 240 200 29 29 chr5 110621898 110621968 -92463564 + L1MCa LINE L1 1996 2065 -4361 29 78 0 0 chr5 110622636 110622700 -92462832 + AT_rich Low_complexity Low_complexity 1 64 0 190 416 0 0 chr5 110622985 110623086 -92462446 + L2 LINE L2 2569 2669 -645 21 57 0 0 chr5 110623364 110623399 -92462133 + AT_rich Low_complexity Low_complexity 1 35 0 309 120 0 0 chr5 110623857 110623907 -92461625 - L1MA4 LINE L1 -5 6295 6246 22 35 0 0 chr5 110624065 110624094 -92461438 + AT_rich Low_complexity Low_complexity 1 29 0 1751 167 28 0 chr5 110624095 110624382 -92461150 + L1M4c LINE L1 20 314 -6070 2966 201 60 12 chr5 110624390 110625210 -92460322 + L1M4c LINE L1 641 1499 -4885 488 138 11 0 chr5 110625210 110625297 -92460235 + L1M1 LINE L1 5706 5793 -510 2508 173 45 37 chr5 110625357 110625958 -92459574 + L1M4c LINE L1 1762 2367 -4017 1975 143 21 16 chr5 110625958 110626336 -92459196 + L1MB3 LINE L1 5800 6179 -4 1711 140 43 16 chr5 110626336 110626658 -92458874 + L1MA3 LINE L1 5627 5957 -348 1448 225 41 12 chr5 110626758 110627096 -92458436 + MSTB1 LTR MaLR 84 431 -1 276 436 40 26 chr5 110627104 110627377 -92458155 + L2 LINE L2 2949 3225 -47 260 259 49 25 chr5 110627475 110627556 -92457976 + L1ME4a LINE L1 5508 5590 -531 201 323 0 0 chr5 110627556 110627618 -92457914 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 301 337 66 18 chr5 110627721 110627887 -92457645 + L1ME4a LINE L1 5718 5891 -230 2164 145 0 0 chr5 110628413 110628724 -92456808 + AluSx SINE Alu 1 311 -1 291 343 28 37 chr5 110629198 110629306 -92456226 + L2 LINE L2 3164 3270 -2 316 162 60 8 chr5 110629614 110629731 -92455801 + (TA)n Simple_repeat Simple_repeat 1 123 0 238 198 22 22 chr5 110629990 110630081 -92455451 + (TATAA)n Simple_repeat Simple_repeat 3 93 0 2754 10 0 0 chr5 110630551 110630851 -92454681 - AluYa5 SINE Alu -11 300 1 2125 242 93 15 chr5 110630892 110631503 -92454029 - MER76 LTR ERV -29 659 1 22 0 0 0 chr5 110632565 110632587 -92452945 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr5 110633716 110633752 -92451780 + (TC)n Simple_repeat Simple_repeat 2 37 0 267 31 0 0 chr5 110633751 110633783 -92451749 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 204 97 0 0 chr5 110634836 110634867 -92450665 + (TG)n Simple_repeat Simple_repeat 2 32 0 4703 197 26 4 chr5 110635976 110636959 -92448573 - L1M2 LINE L1 -1781 4365 3361 4598 181 23 23 chr5 110636954 110638056 -92447476 + L1M2 LINE L1 4357 5468 -743 * 29 0 0 0 chr5 110639858 110639887 -92445645 + AT_rich Low_complexity Low_complexity 1 29 0 386 343 93 40 chr5 110640090 110640487 -92445045 - L3 LINE CR1 -712 865 448 39 0 0 0 chr5 110640840 110640879 -92444653 + AT_rich Low_complexity Low_complexity 1 39 0 217 240 0 0 chr5 110640984 110641034 -92444498 + L3 LINE CR1 646 695 -882 22 0 0 0 chr5 110641119 110641141 -92444391 + AT_rich Low_complexity Low_complexity 1 22 0 17901 36 3 0 chr5 110643022 110645970 -92439562 - L1PA3 LINE L1 -1 6154 3198 773 227 24 76 chr5 110695972 110696223 -92389309 - MLT1A1 LTR MaLR -120 245 8 1240 205 8 25 chr5 110696297 110696541 -92388991 + MER74C LTR ERVL 221 460 0 282 274 12 48 chr5 110696822 110696993 -92388539 + MLT1H LTR MaLR 47 179 -230 354 282 45 0 chr5 110696994 110697104 -92388428 + MER46A DNA MER2_type 1 115 -121 2041 131 0 0 chr5 110698478 110698769 -92386763 - AluSx SINE Alu -21 291 1 189 311 94 38 chr5 110699108 110699214 -92386318 - L2 LINE L2 -5 3267 3156 922 95 22 0 chr5 110700481 110700618 -92384914 - L1MA4A LINE L1 -5 6298 6159 495 0 0 0 chr5 110700996 110701051 -92384481 + (TA)n Simple_repeat Simple_repeat 2 56 0 418 321 10 56 chr5 110701411 110701607 -92383925 + MIR3 SINE MIR 21 207 -1 587 200 23 79 chr5 110701646 110701877 -92383655 - MER69 DNA AcHobo 0 2526 2 12225 93 5 5 chr5 110702577 110704268 -92381264 + Harlequin LTR ERV1 3265 4954 -3445 1168 124 72 66 chr5 110704261 110704609 -92380923 + Harlequin LTR ERV1 840 1189 -5707 * 341 258 11 48 chr5 110704611 110704797 -92380735 + (CATA)n Simple_repeat Simple_repeat 2 180 0 * 400 250 11 43 chr5 110704670 110704854 -92380678 + (TA)n Simple_repeat Simple_repeat 2 179 0 1005 158 48 0 chr5 110705007 110705172 -92380360 - LTR12 LTR ERV1 -228 486 314 38 0 0 0 chr5 110705172 110705210 -92380322 + AT_rich Low_complexity Low_complexity 1 38 0 2295 63 0 3 chr5 110705727 110706035 -92379497 + AluY SINE Alu 2 308 0 46 19 0 0 chr5 110706308 110706361 -92379171 + AT_rich Low_complexity Low_complexity 1 53 0 592 139 9 19 chr5 110708133 110708241 -92377291 + L1MA2 LINE L1 6194 6300 -4 189 0 0 0 chr5 110708558 110708579 -92376953 + (CA)n Simple_repeat Simple_repeat 2 22 0 691 252 0 0 chr5 110708651 110708810 -92376722 + MER89 LTR ERV1 167 325 -234 21 0 0 0 chr5 110711126 110711147 -92374385 + AT_rich Low_complexity Low_complexity 1 21 0 626 321 30 30 chr5 110711306 110711568 -92373964 - MLT1H1 LTR MaLR -288 267 6 186 328 0 0 chr5 110712513 110712574 -92372958 + L2 LINE L2 2309 2369 -945 2176 100 0 7 chr5 110712937 110713238 -92372294 - AluY SINE Alu -12 299 1 23 33 0 0 chr5 110714139 110714169 -92371363 + AT_rich Low_complexity Low_complexity 1 30 0 1792 102 4 8 chr5 110714323 110714577 -92370955 - AluSx SINE Alu -10 302 50 502 244 53 60 chr5 110717456 110717755 -92367777 + L1MDb LINE L1 1044 1340 -5203 3289 154 8 30 chr5 110717849 110718332 -92367200 + L1PA16 LINE L1 5558 6027 -139 2355 77 0 3 chr5 110718332 110718644 -92366888 + AluY SINE Alu 1 311 0 3289 154 8 30 chr5 110718644 110718750 -92366782 + L1PA16 LINE L1 6027 6134 -32 1369 243 22 31 chr5 110718953 110719402 -92366130 + L1MDb LINE L1 1595 2039 -4501 220 235 0 51 chr5 110719927 110720025 -92365507 + T-rich Low_complexity Low_complexity 2 94 0 498 242 34 7 chr5 110720034 110720052 -92365480 - L1MA10 LINE L1 0 6334 6317 475 247 107 29 chr5 110720052 110720295 -92365237 - L1ME3 LINE L1 -7 6155 5894 597 161 0 18 chr5 110720522 110720634 -92364898 - LTR1 LTR ERV1 -675 110 1 634 114 0 0 chr5 110720637 110720725 -92364807 - HUERS-P2 LTR ERV1 -4 3084 2997 757 198 6 6 chr5 110720727 110720889 -92364643 + L1P LINE L1 4972 5133 -1013 230 155 0 70 chr5 110721235 110721306 -92364226 + T-rich Low_complexity Low_complexity 4 69 0 26 0 0 0 chr5 110721467 110721493 -92364039 + AT_rich Low_complexity Low_complexity 1 26 0 594 361 121 12 chr5 110721588 110722017 -92363515 - L2 LINE L2 0 3313 2838 34 55 0 0 chr5 110722021 110722076 -92363456 + AT_rich Low_complexity Low_complexity 1 55 0 254 329 37 12 chr5 110722679 110722761 -92362771 - MIR SINE MIR -158 104 21 4580 176 76 20 chr5 110722860 110723946 -92361586 + L1MC1 LINE L1 5188 6333 0 21 36 0 0 chr5 110724010 110724038 -92361494 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr5 110724230 110724271 -92361261 + AT_rich Low_complexity Low_complexity 1 41 0 306 335 159 26 chr5 110725164 110725391 -92360141 - L1MEd LINE L1 -5446 673 417 1903 191 65 31 chr5 110725731 110726145 -92359387 + MSTA LTR MaLR 1 428 0 262 302 31 10 chr5 110726172 110726268 -92359264 - L1M4 LINE L1 -2034 4112 4015 * 403 255 35 0 chr5 110726267 110726408 -92359124 - L1MEc LINE L1 -4387 2009 1864 2103 110 7 3 chr5 110726423 110726724 -92358808 - AluSc SINE Alu -7 302 1 4550 76 80 2 chr5 110728181 110728816 -92356716 + LTR12 LTR ERV1 3 687 -1 29 60 0 0 chr5 110729006 110729056 -92356476 + AT_rich Low_complexity Low_complexity 1 50 0 1792 90 4 0 chr5 110729183 110729417 -92356115 + AluY SINE Alu 66 300 -11 31 26 0 0 chr5 110729894 110729932 -92355600 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 110730294 110730324 -92355208 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 110730430 110730452 -92355080 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 110730506 110730535 -92354997 + AT_rich Low_complexity Low_complexity 1 29 0 1959 89 99 0 chr5 110732559 110732841 -92352691 + AluY SINE Alu 1 310 -1 2762 13 0 3 chr5 110734086 110734588 -92350944 - L1P1 LINE L1 -577 5578 5078 2632 16 3 3 chr5 110734588 110734898 -92350634 + L1PA3 LINE L1 5845 6155 0 198 330 57 45 chr5 110736380 110736468 -92349064 - L2 LINE L2 -2 3311 3223 288 205 39 0 chr5 110736868 110736946 -92348586 - LTR37A LTR ERV1 -19 407 327 6300 206 46 78 chr5 110737007 110738819 -92346713 - MER52A LTR ERV1 0 1755 1 882 237 0 0 chr5 110738988 110739165 -92346367 - AluJb SINE Alu -2 310 134 640 234 159 4 chr5 110739165 110739392 -92346140 - LTR37B LTR ERV1 -4 464 203 2187 78 10 10 chr5 110739926 110740219 -92345313 - AluY SINE Alu -18 293 1 21 0 0 0 chr5 110742633 110742654 -92342878 + AT_rich Low_complexity Low_complexity 1 21 0 257 259 0 62 chr5 110743016 110743097 -92342435 + MLT1L LTR MaLR 236 311 -304 1740 138 46 87 chr5 110743469 110743860 -92341672 + THE1C LTR MaLR 1 375 0 480 18 0 0 chr5 110743961 110744018 -92341514 + (TG)n Simple_repeat Simple_repeat 2 58 0 304 275 66 73 chr5 110744157 110744459 -92341073 + L1MCc LINE L1 21 320 -6103 956 275 51 61 chr5 110744466 110745215 -92340317 + L1MCc LINE L1 2560 3265 -3676 1393 263 27 18 chr5 110745317 110745758 -92339774 + L1MCc LINE L1 3268 3712 -3229 21 0 0 0 chr5 110747531 110747552 -92337980 + AT_rich Low_complexity Low_complexity 1 21 0 1416 210 49 136 chr5 110747629 110748080 -92337452 - L1MD3 LINE L1 -10 7985 7605 1786 179 0 0 chr5 110748080 110748388 -92337144 - AluJb SINE Alu -4 308 1 1416 210 49 136 chr5 110748388 110748574 -92336958 - L1MD3 LINE L1 -390 7605 7404 431 212 0 12 chr5 110748574 110748659 -92336873 - MLT1F1 LTR MaLR -442 125 42 691 239 21 16 chr5 110748691 110748879 -92336653 - L1MD3 LINE L1 -715 7280 7092 766 265 61 11 chr5 110748888 110749184 -92336348 - L1MC3 LINE L1 -923 6862 6609 290 250 0 0 chr5 110749185 110749249 -92336283 + (TATATG)n Simple_repeat Simple_repeat 1 64 0 544 240 175 42 chr5 110749261 110749610 -92335922 + MER57A LTR ERV1 65 394 -9 1714 131 0 7 chr5 110750427 110750702 -92334830 + L1PB1 LINE L1 5876 6148 -3 2833 140 5 5 chr5 110751614 110752063 -92333469 + L1PA16 LINE L1 5709 6157 -9 619 267 56 0 chr5 110752893 110753073 -92332459 + MER63A DNA MER1_type 1 190 -20 3158 32 2 0 chr5 110753931 110754490 -92331042 - L1PA5 LINE L1 -588 5566 5007 4778 47 3 0 chr5 110754490 110755070 -92330462 + L1PA5 LINE L1 5570 6152 -2 2881 246 51 56 chr5 110755140 110756423 -92329109 + L1M4 LINE L1 2974 4250 -1896 1307 271 32 15 chr5 110756451 110756857 -92328675 + L1PA12 LINE L1 3 415 -7166 2132 311 67 65 chr5 110756897 110758396 -92327136 + L1PA12 LINE L1 555 2080 -5501 * 4810 185 43 20 chr5 110758391 110760057 -92325475 + L1M1 LINE L1 3043 4751 -2814 345 198 37 0 chr5 110760062 110760143 -92325389 + L1M1 LINE L1 5823 5906 -1659 21 89 0 0 chr5 110760362 110760418 -92325114 + AT_rich Low_complexity Low_complexity 1 56 0 889 266 153 26 chr5 110760563 110761032 -92324500 - L1ME3 LINE L1 0 6162 5634 709 191 27 21 chr5 110761033 110761221 -92324311 - MER53 DNA DNA 0 189 1 463 262 41 9 chr5 110761525 110761746 -92323786 - L1ME3 LINE L1 -1552 4594 4367 353 267 0 0 chr5 110761885 110761960 -92323572 + L2 LINE L2 3228 3302 -11 203 313 55 55 chr5 110762541 110762669 -92322863 + L3 LINE CR1 1293 1420 -157 601 224 22 38 chr5 110764232 110764415 -92321117 - L1MD3 LINE L1 -13 7982 7803 1589 188 27 3 chr5 110765225 110765555 -92319977 - L1MA3 LINE L1 -2 6303 5966 562 221 50 43 chr5 110765752 110765892 -92319640 - MER92C LTR ERV1 -3 551 411 599 215 0 30 chr5 110766052 110766187 -92319345 - MER92C LTR ERV1 -169 385 255 2163 109 87 52 chr5 110766195 110766539 -92318993 + MSTA LTR MaLR 1 362 -66 189 0 0 0 chr5 110766539 110766560 -92318972 + (TG)n Simple_repeat Simple_repeat 2 22 0 2163 109 87 52 chr5 110766560 110766618 -92318914 + MSTA LTR MaLR 362 417 -11 2251 63 0 10 chr5 110767964 110768265 -92317267 - AluY SINE Alu -13 298 1 543 134 98 0 chr5 110769962 110770074 -92315458 + Charlie5 DNA MER1_type 2 124 -2488 1363 198 99 0 chr5 110770076 110770430 -92315102 + Charlie5 DNA MER1_type 2236 2624 0 354 290 68 68 chr5 110770729 110771039 -92314493 + L1MC4a LINE L1 5593 5902 -1906 24 32 0 0 chr5 110771066 110771097 -92314435 + AT_rich Low_complexity Low_complexity 1 31 0 27 81 0 0 chr5 110771195 110771257 -92314275 + AT_rich Low_complexity Low_complexity 1 62 0 28 0 0 0 chr5 110771303 110771331 -92314201 + AT_rich Low_complexity Low_complexity 1 28 0 712 181 0 15 chr5 110771561 110771694 -92313838 + FLAM_C SINE Alu 3 133 0 26 0 0 0 chr5 110772139 110772165 -92313367 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr5 110772329 110772366 -92313166 + AT_rich Low_complexity Low_complexity 1 37 0 25 65 0 0 chr5 110773667 110773713 -92311819 + AT_rich Low_complexity Low_complexity 1 46 0 13768 26 0 2 chr5 110774248 110776700 -92308832 + L1PA2 LINE L1 3727 6155 0 657 264 61 32 chr5 110777368 110777614 -92307918 - ERVL LTR ERVL -267 5497 5245 848 304 89 20 chr5 110777649 110778053 -92307479 - ERVL LTR ERVL -706 5058 4627 1822 322 54 26 chr5 110778132 110779237 -92306295 - ERVL LTR ERVL -1092 4393 3236 1259 299 95 31 chr5 110779599 110780187 -92305345 + MLT1E2 LTR MaLR 1 626 0 498 149 0 43 chr5 110780292 110780386 -92305146 - Tigger4(Zombi) DNA MER2_type 0 2731 2642 551 338 35 56 chr5 110781114 110781540 -92303992 + MLT1K LTR MaLR 143 559 -29 24 32 0 0 chr5 110782111 110782142 -92303390 + AT_rich Low_complexity Low_complexity 1 31 0 1559 194 21 4 chr5 110782523 110782802 -92302730 - AluJo SINE Alu -26 286 3 24 32 0 0 chr5 110784280 110784311 -92301221 + AT_rich Low_complexity Low_complexity 1 31 0 266 326 43 28 chr5 110784639 110784780 -92300752 + L1ME LINE L1 2 144 -5926 23 86 0 0 chr5 110786802 110786860 -92298672 + AT_rich Low_complexity Low_complexity 1 58 0 249 333 13 0 chr5 110787313 110787391 -92298141 + L2 LINE L2 3235 3313 0 203 59 0 29 chr5 110787836 110787870 -92297662 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 3900 28 0 0 chr5 110787870 110788328 -92297204 - L1PA3 LINE L1 -24 6131 5674 682 319 127 3 chr5 110788871 110789194 -92296338 - L2 LINE L2 -461 2853 2491 325 276 9 29 chr5 110789219 110789324 -92296208 - MLT1K LTR MaLR -485 103 1 3232 151 39 29 chr5 110790045 110790373 -92295159 + Tigger3b DNA MER2_type 7 345 -2683 180 0 0 0 chr5 110790373 110790393 -92295139 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3232 151 39 29 chr5 110790393 110790688 -92294844 + Tigger3b DNA MER2_type 345 636 -595 485 138 0 0 chr5 110790928 110791015 -92294517 - L1PA15 LINE L1 0 6165 6079 3086 131 36 51 chr5 110791015 110791043 -92294489 + Tigger3b DNA MER2_type 644 671 -2358 1686 140 87 36 chr5 110791043 110791400 -92294132 + THE1C LTR MaLR 1 375 0 3086 131 36 51 chr5 110791400 110791964 -92293568 + Tigger3b DNA MER2_type 671 1229 -3 1727 186 24 0 chr5 110792457 110792753 -92292779 + AluJb SINE Alu 1 303 -9 5716 173 31 1 chr5 110792886 110794126 -92291406 - L1MA4 LINE L1 -6 6294 5021 439 83 14 14 chr5 110794118 110794190 -92291342 + L1 LINE L1 4290 4361 -1785 * 207 0 0 0 chr5 110794190 110794213 -92291319 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1302 191 8 25 chr5 110794215 110794456 -92291076 + AluJo SINE Alu 1 237 -75 778 357 22 13 chr5 110795830 110796141 -92289391 + MER115 DNA AcHobo 1 314 -379 391 276 115 84 chr5 110796167 110796428 -92289104 + MER115 DNA AcHobo 387 655 -38 325 236 81 49 chr5 110796526 110796649 -92288883 + L1ME LINE L1 3516 3642 -2504 27 81 0 0 chr5 110796649 110796711 -92288821 + AT_rich Low_complexity Low_complexity 1 62 0 1168 257 84 26 chr5 110797292 110797521 -92288011 + L1ME LINE L1 4665 4879 -1285 2301 94 3 3 chr5 110797521 110797830 -92287702 - AluSq SINE Alu -4 309 1 1168 257 84 26 chr5 110797830 110798504 -92287028 + L1ME LINE L1 4879 5638 -526 325 167 51 26 chr5 110798588 110798666 -92286866 + L1ME LINE L1 5672 5751 -411 316 73 127 0 chr5 110799203 110799258 -92286274 - L1P LINE L1 -2409 3737 3676 2492 51 0 0 chr5 110799258 110799571 -92285961 + L1PA7 LINE L1 5840 6153 -1 2068 100 21 0 chr5 110799587 110799983 -92285549 + AluSq SINE Alu 1 402 0 249 173 47 11 chr5 110801151 110801257 -92284275 + L1MA1 LINE L1 6198 6302 0 389 308 57 19 chr5 110801618 110801777 -92283755 - MIR SINE MIR -50 212 48 1217 237 112 53 chr5 110801792 110802265 -92283267 - MLT1D LTR MaLR 0 505 5 236 216 90 54 chr5 110803162 110803273 -92282259 + MIR3 SINE MIR 42 156 -52 766 224 18 35 chr5 110803275 110803445 -92282087 - MER5A DNA MER1_type -1 188 22 1696 192 30 0 chr5 110806188 110806521 -92279011 - MER2 DNA MER2_type -1 343 1 1556 180 3 29 chr5 110807024 110807330 -92278202 - AluJb SINE Alu -11 301 4 662 110 0 10 chr5 110808211 110808311 -92277221 + HY3 scRNA scRNA 1 99 -2 221 333 167 0 chr5 110809081 110809231 -92276301 + MIR SINE MIR 86 260 -2 195 429 0 0 chr5 110809683 110809774 -92275758 - MIR SINE MIR -78 130 40 4807 189 35 34 chr5 110809788 110810844 -92274688 - Tigger6a DNA MER2_type -3 1080 24 830 354 60 12 chr5 110811033 110811701 -92273831 - L2 LINE L2 -92 3221 2527 180 77 0 0 chr5 110812101 110812127 -92273405 + (CGGGGG)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr5 110814082 110814103 -92271429 + AT_rich Low_complexity Low_complexity 1 21 0 7039 210 128 9 chr5 110815894 110817463 -92268069 + MER52A LTR ERV1 1 1755 0 592 319 121 49 chr5 110817597 110817945 -92267587 - LTR16B LTR ERVL -91 373 1 235 242 94 31 chr5 110818633 110818761 -92266771 + L1MDa LINE L1 1647 1782 -4758 638 247 6 41 chr5 110819246 110819416 -92266116 - MER20 DNA MER1_type -1 218 55 301 259 88 48 chr5 110819430 110819577 -92265955 + L1MDa LINE L1 2434 2586 -3954 34 24 0 0 chr5 110820034 110820075 -92265457 + AT_rich Low_complexity Low_complexity 1 41 0 580 324 45 25 chr5 110820554 110820798 -92264734 + L2 LINE L2 17 265 -3049 5488 197 156 33 chr5 110820864 110822362 -92263170 - MER52A LTR ERV1 0 1755 1 183 313 0 75 chr5 110822488 110822555 -92262977 + L2 LINE L2 405 466 -2848 1416 274 58 23 chr5 110822607 110823125 -92262407 + MLT1F LTR MaLR 7 542 0 767 304 37 71 chr5 110823126 110823245 -92262287 + L2 LINE L2 507 629 -2685 1121 258 56 3 chr5 110823245 110823532 -92262000 - AluJo SINE Alu 0 302 1 767 304 37 71 chr5 110823532 110823820 -92261712 + L2 LINE L2 629 900 -2414 279 0 0 0 chr5 110823917 110823948 -92261584 + (A)n Simple_repeat Simple_repeat 1 31 0 951 340 113 14 chr5 110823948 110824468 -92261064 + L2 LINE L2 2033 2604 -710 253 333 22 66 chr5 110824546 110824729 -92260803 + L2 LINE L2 2976 3150 -163 21153 83 2 6 chr5 110824797 110828546 -92256986 - L1PA7 LINE L1 -3 6151 2416 224 336 104 0 chr5 110828555 110828680 -92256852 + L2 LINE L2 3159 3296 -17 435 281 66 53 chr5 110828775 110829077 -92256455 + L1MDa LINE L1 3478 3783 -2757 26 0 0 0 chr5 110829084 110829110 -92256422 + AT_rich Low_complexity Low_complexity 1 26 0 1135 275 62 0 chr5 110831632 110832032 -92253500 - L1MC/D LINE L1 -2031 5777 5353 1890 185 5 40 chr5 110832991 110833419 -92252113 - MLT2D LTR ERVL 0 414 2 440 317 68 6 chr5 110833492 110833653 -92251879 + L1MCc LINE L1 1065 1235 -5188 534 300 30 19 chr5 110833675 110833938 -92251594 + L1MCc LINE L1 1147 1412 -5011 357 296 76 60 chr5 110834031 110834413 -92251119 - L1MCc LINE L1 -6019 404 17 476 191 0 0 chr5 110834477 110834561 -92250971 + FLAM_A SINE Alu 42 125 -17 316 298 62 19 chr5 110834582 110834946 -92250586 - L1MEd LINE L1 -4811 1776 1360 346 252 70 0 chr5 110835069 110835184 -92250348 - L1MEd LINE L1 -5172 1237 1115 1176 263 127 35 chr5 110836610 110837066 -92248466 + MLT1D LTR MaLR 1 498 -7 1722 174 23 20 chr5 110837093 110837473 -92248059 - LOR1b LTR ERV1 0 461 1 3407 120 39 2 chr5 110839792 110840300 -92245232 + MER1A DNA MER1_type 1 527 0 241 77 0 0 chr5 110841930 110841969 -92243563 + Alu SINE Alu 260 298 -2 249 256 0 26 chr5 110843517 110843595 -92241937 + L1MCc LINE L1 1736 1811 -5120 2406 65 0 3 chr5 110843776 110844086 -92241446 + AluY SINE Alu 1 309 -2 300 273 8 31 chr5 110844195 110844323 -92241209 + L1M1 LINE L1 2816 3016 -4625 1065 294 22 56 chr5 110844363 110844808 -92240724 - MLT1F LTR MaLR -110 432 3 693 242 159 44 chr5 110844853 110845242 -92240290 + L1MC4a LINE L1 5400 5833 -1975 22 99 0 0 chr5 110845930 110846001 -92239531 + AT_rich Low_complexity Low_complexity 1 71 0 232 312 74 42 chr5 110846343 110846532 -92239000 - L1M4 LINE L1 -1947 4199 4005 2265 82 0 13 chr5 110846694 110846998 -92238534 - AluY SINE Alu -11 300 1 811 149 56 5 chr5 110847011 110847194 -92238338 + MER61C LTR ERV1 1 175 -259 808 141 81 20 chr5 110847193 110847342 -92238190 + MER61D LTR ERV1 343 500 -1 * 1044 152 48 0 chr5 110847538 110847703 -92237829 + AluSx SINE Alu 1 173 -139 25 0 0 0 chr5 110847732 110847757 -92237775 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr5 110848026 110848054 -92237478 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr5 110848094 110848131 -92237401 + AT_rich Low_complexity Low_complexity 1 37 0 1958 118 0 43 chr5 110848727 110849031 -92236501 + AluY SINE Alu 1 291 -20 574 305 76 77 chr5 110849054 110849610 -92235922 - L2 LINE L2 -198 3115 2556 1068 217 114 4 chr5 110849648 110849920 -92235612 + AluSx SINE Alu 1 302 0 28 29 0 0 chr5 110850373 110850408 -92235124 + AT_rich Low_complexity Low_complexity 1 35 0 301 181 38 9 chr5 110850732 110850837 -92234695 + (TA)n Simple_repeat Simple_repeat 1 108 0 261 291 68 10 chr5 110851426 110851529 -92234003 - MIR SINE MIR -39 223 115 754 258 39 0 chr5 110852175 110852353 -92233179 - MER5A DNA MER1_type -2 187 3 276 59 0 0 chr5 110852372 110852406 -92233126 - L1P3 LINE L1 -687 5485 5452 11417 163 38 62 chr5 110852410 110855419 -92230113 + L1MA3 LINE L1 1489 4568 -3156 216 0 0 0 chr5 110855419 110855443 -92230089 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 11417 163 38 62 chr5 110855443 110858629 -92226903 + L1MA3 LINE L1 4568 7828 104 2036 102 0 14 chr5 110858629 110858912 -92226620 + AluSx SINE Alu 3 281 -31 180 0 0 0 chr5 110858916 110858936 -92226596 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 11417 163 38 62 chr5 110858936 110859125 -92226407 + L1MA3 LINE L1 7525 7717 -7 1492 224 43 20 chr5 110859121 110859513 -92226019 + L1MB7 LINE L1 5773 6173 -11 * 602 321 93 19 chr5 110859737 110860403 -92225129 + L1M4 LINE L1 4056 4770 -1376 308 248 30 15 chr5 110861228 110861361 -92224171 + (CAGAGA)n Simple_repeat Simple_repeat 2 136 0 1100 158 0 0 chr5 110861399 110861576 -92223956 - MER7A DNA MER2_type -171 175 1 24 85 0 0 chr5 110861921 110861980 -92223552 + AT_rich Low_complexity Low_complexity 1 59 0 220 196 0 0 chr5 110862195 110862241 -92223291 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 213 412 24 19 chr5 110862565 110862776 -92222756 + MIR SINE MIR 46 257 -5 186 360 23 12 chr5 110863730 110863816 -92221716 - L2 LINE L2 -50 3222 3136 210 139 0 0 chr5 110863985 110864021 -92221511 + (TG)n Simple_repeat Simple_repeat 1 36 0 275 49 24 0 chr5 110864226 110864267 -92221265 + (CA)n Simple_repeat Simple_repeat 2 43 0 183 42 0 0 chr5 110864790 110864814 -92220718 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 195 42 0 0 chr5 110864813 110864837 -92220695 + (CA)n Simple_repeat Simple_repeat 1 24 0 371 255 0 21 chr5 110865802 110865896 -92219636 - L2 LINE L2 -1 3312 3221 266 358 0 74 chr5 110865933 110866109 -92219423 - L2 LINE L2 -308 3005 2843 24 0 0 0 chr5 110866853 110866877 -92218655 + AT_rich Low_complexity Low_complexity 1 24 0 216 328 44 55 chr5 110867860 110868043 -92217489 - MIR SINE MIR -66 196 16 198 284 85 50 chr5 110868625 110868766 -92216766 + L2 LINE L2 3124 3269 -44 233 318 0 16 chr5 110869819 110869882 -92215650 - MIR3 SINE MIR -141 67 6 1750 316 127 7 chr5 110879355 110880130 -92205402 + L2 LINE L2 1762 2629 -685 264 197 28 0 chr5 110880138 110880209 -92205323 + (TA)n Simple_repeat Simple_repeat 2 74 0 202 358 45 0 chr5 110880286 110880353 -92205179 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 110880672 110880697 -92204835 + AT_rich Low_complexity Low_complexity 1 25 0 299 387 158 11 chr5 110880987 110881437 -92204095 - L2 LINE L2 -348 2966 2451 1508 189 63 58 chr5 110881683 110882198 -92203334 + MER67C LTR ERV1 1 486 -28 252 321 61 8 chr5 110882221 110882352 -92203180 + MER69 DNA AcHobo 218 355 -2171 735 148 11 197 chr5 110882503 110882767 -92202765 + AluJo SINE Alu 1 215 -97 3127 227 5 6 chr5 110982821 110983618 -92101914 + L1 LINE L1 3913 4708 -1438 * 3550 131 5 8 chr5 110983615 110984325 -92101207 + L1P5 LINE L1 5084 5791 -360 321 267 0 22 chr5 110984325 110984415 -92101117 + L1MC4 LINE L1 6615 6702 -1340 2603 82 8 24 chr5 110984415 110984426 -92101106 + L1PB1 LINE L1 5782 5792 -359 255 31 0 0 chr5 110984426 110984458 -92101074 + (CA)n Simple_repeat Simple_repeat 2 33 0 2603 82 8 24 chr5 110984458 110984822 -92100710 + L1PB1 LINE L1 5792 6151 0 1600 234 0 0 chr5 110984837 110985179 -92100353 + L1 LINE L1 2377 2718 -3428 21 0 0 0 chr5 110985259 110985280 -92100252 + AT_rich Low_complexity Low_complexity 1 21 0 440 96 110 0 chr5 110985365 110985438 -92100094 - L1MA6 LINE L1 -182 6118 6038 972 123 41 6 chr5 110985441 110985612 -92099920 + L1MA6 LINE L1 6118 6294 -6 180 77 0 0 chr5 110986139 110986165 -92099367 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1866 172 16 29 chr5 110986337 110986721 -92098811 + L1PB4 LINE L1 5777 6155 -1 4430 102 15 1 chr5 110987121 110987769 -92097763 - L1PA11 LINE L1 -1 6173 5517 346 91 73 0 chr5 110987797 110987852 -92097680 - L1PA11 LINE L1 -1972 4174 4116 * 23286 51 11 2 chr5 110987847 110990954 -92094578 - L1P4 LINE L1 -659 5515 2384 1642 234 67 13 chr5 110991134 110991660 -92093872 - L1 LINE L1 -2964 3884 3331 4178 254 51 45 chr5 110991673 110993872 -92091660 - L1 LINE L1 -3681 3167 1182 1163 340 53 37 chr5 110994129 110994773 -92090759 - L1 LINE L1 -6133 716 63 266 267 13 0 chr5 110994847 110994922 -92090610 + (TA)n Simple_repeat Simple_repeat 2 77 0 300 111 0 0 chr5 110994926 110994971 -92090561 + (TG)n Simple_repeat Simple_repeat 2 46 0 1494 176 48 0 chr5 110994974 110995101 -92090431 - AluJo SINE Alu -45 267 148 270 0 0 0 chr5 110995101 110995131 -92090401 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1494 176 48 0 chr5 110995131 110995253 -92090279 - AluJo SINE Alu -164 148 6 241 227 0 40 chr5 110996776 110996851 -92088681 + T-rich Low_complexity Low_complexity 5 76 0 324 0 0 0 chr5 110997285 110997321 -92088211 + (TG)n Simple_repeat Simple_repeat 2 37 0 6666 122 154 86 chr5 110997639 110999228 -92086304 - pTR5 LTR ERV1 0 2438 741 249 286 0 0 chr5 110999383 110999453 -92086079 + MLT1K LTR MaLR 485 554 -34 388 212 8 17 chr5 111000588 111000706 -92084826 + CT-rich Low_complexity Low_complexity 4 120 0 183 284 15 60 chr5 111000829 111000896 -92084636 - MIR SINE MIR -71 137 74 557 241 14 21 chr5 111002772 111002917 -92082615 + MER69 DNA AcHobo 4 147 -2379 824 246 0 17 chr5 111003755 111003934 -92081598 + MLT1H LTR MaLR 12 187 -362 285 231 46 0 chr5 111004076 111004141 -92081391 + MLT1H LTR MaLR 482 549 0 194 274 0 83 chr5 111004702 111004786 -92080746 - MIR SINE MIR -67 195 119 258 330 55 18 chr5 111005043 111005316 -92080216 + L1M4 LINE L1 3812 4094 -2052 388 211 26 0 chr5 111005353 111005429 -92080103 + MER96 DNA MER1_type? 87 164 -11 494 275 79 44 chr5 111007007 111007134 -92078398 + MIR SINE MIR 23 163 -99 1942 149 14 3 chr5 111007134 111007429 -92078103 - AluSx SINE Alu -14 298 1 494 275 79 44 chr5 111007429 111007530 -92078002 + MIR SINE MIR 163 259 -3 24 0 0 0 chr5 111008596 111008620 -92076912 + AT_rich Low_complexity Low_complexity 1 24 0 305 180 0 0 chr5 111009296 111009346 -92076186 - L1MC4 LINE L1 -1339 6703 6654 22 0 0 0 chr5 111009637 111009659 -92075873 + AT_rich Low_complexity Low_complexity 1 22 0 34898 80 7 28 chr5 111009699 111015594 -92069938 + L1PA6 LINE L1 385 6148 -6 23 33 0 0 chr5 111015603 111015633 -92069899 + AT_rich Low_complexity Low_complexity 1 30 0 968 98 0 182 chr5 111015933 111016169 -92069363 - 7SK RNA RNA 0 193 1 2146 266 39 15 chr5 111016184 111017048 -92068484 - L1M4 LINE L1 -950 5196 4312 1699 61 0 0 chr5 111018235 111018449 -92067083 - AluY SINE Alu -1 310 97 24 0 0 0 chr5 111019168 111019192 -92066340 + AT_rich Low_complexity Low_complexity 1 24 0 275 290 0 0 chr5 111019361 111019430 -92066102 - L2 LINE L2 -3 3269 3201 225 407 26 0 chr5 111019695 111019808 -92065724 + L2 LINE L2 3154 3269 -3 209 316 25 0 chr5 111019810 111019889 -92065643 + GA-rich Low_complexity Low_complexity 2 82 0 310 164 58 0 chr5 111020327 111020431 -92065101 + (TA)n Simple_repeat Simple_repeat 1 110 0 449 94 72 0 chr5 111020444 111020582 -92064950 + (TA)n Simple_repeat Simple_repeat 1 148 0 26 30 0 0 chr5 111020582 111020615 -92064917 + AT_rich Low_complexity Low_complexity 1 33 0 289 149 30 0 chr5 111020635 111020702 -92064830 + (TA)n Simple_repeat Simple_repeat 1 69 0 512 298 66 18 chr5 111020915 111021143 -92064389 + MIR SINE MIR 11 249 -13 204 125 0 0 chr5 111021828 111021860 -92063672 + (T)n Simple_repeat Simple_repeat 1 32 0 313 343 7 0 chr5 111022682 111022828 -92062704 - L1ME LINE L1 -453 5668 5522 1250 296 27 24 chr5 111022940 111023491 -92062041 - L1PA13 LINE L1 -4852 2729 2177 337 315 103 0 chr5 111023713 111023878 -92061654 - L1PA13 LINE L1 -5280 2294 2088 815 393 53 19 chr5 111023956 111024523 -92061009 - L1PA13 LINE L1 -6200 1374 789 33 66 0 0 chr5 111024804 111024865 -92060667 + AT_rich Low_complexity Low_complexity 1 61 0 190 262 16 0 chr5 111025439 111025500 -92060032 + L2 LINE L2 3190 3251 -62 2277 113 3 0 chr5 111025526 111025837 -92059695 - AluSq SINE Alu -1 312 1 254 28 0 28 chr5 111026807 111026843 -92058689 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 29 60 0 0 chr5 111028623 111028673 -92056859 + AT_rich Low_complexity Low_complexity 1 50 0 6706 154 15 23 chr5 111028964 111031048 -92054484 - L1PA13 LINE L1 -4 6159 4084 260 211 0 0 chr5 111031049 111031101 -92054431 - L1PA13 LINE L1 -2657 3489 3438 3922 154 0 3 chr5 111031252 111031894 -92053638 - L1P LINE L1 -2069 4077 3438 197 259 17 35 chr5 111031991 111032049 -92053483 + MIR SINE MIR 99 155 -107 1967 200 40 21 chr5 111032929 111033349 -92052183 - MSTC LTR MaLR 0 428 1 29 60 0 0 chr5 111033577 111033627 -92051905 + AT_rich Low_complexity Low_complexity 1 50 0 1844 266 57 18 chr5 111033662 111034154 -92051378 + LTR40a LTR ERVL 7 517 -2 2264 104 0 3 chr5 111034199 111034498 -92051034 - AluSx SINE Alu -14 298 1 329 372 22 0 chr5 111034504 111034641 -92050891 - MIR SINE MIR -121 141 2 948 264 40 79 chr5 111035115 111035559 -92049973 + MLT1K LTR MaLR 122 548 -40 26 50 0 0 chr5 111035794 111035834 -92049698 + AT_rich Low_complexity Low_complexity 1 40 0 1373 164 38 67 chr5 111035872 111036245 -92049287 + L1MA8 LINE L1 5928 6289 -2 198 91 0 0 chr5 111037040 111037073 -92048459 + (CA)n Simple_repeat Simple_repeat 2 34 0 428 300 26 73 chr5 111038904 111039094 -92046438 + MIR SINE MIR 3 178 -84 1158 242 138 37 chr5 111039094 111039552 -92045980 + MLT1D LTR MaLR 2 505 0 428 300 26 73 chr5 111039552 111039634 -92045898 + MIR SINE MIR 178 262 0 349 337 91 30 chr5 111039705 111039904 -92045628 - MIR SINE MIR -12 250 40 1543 239 66 68 chr5 111040195 111040847 -92044685 + MLT1E1 LTR MaLR 4 654 0 411 224 0 0 chr5 111042691 111042798 -92042734 + (TA)n Simple_repeat Simple_repeat 2 108 0 495 211 19 0 chr5 111042834 111042990 -92042542 + (TA)n Simple_repeat Simple_repeat 2 160 0 204 179 0 0 chr5 111043024 111043063 -92042469 + (TA)n Simple_repeat Simple_repeat 1 39 0 242 289 79 0 chr5 111044401 111044477 -92041055 + L2 LINE L2 3232 3313 0 345 320 10 0 chr5 111044637 111044737 -92040795 + MIR SINE MIR 45 145 -63 22 0 0 0 chr5 111044776 111044798 -92040734 + AT_rich Low_complexity Low_complexity 1 22 0 263 397 30 39 chr5 111045050 111045284 -92040248 - L2 LINE L2 -841 2473 2242 33 0 0 0 chr5 111046204 111046237 -92039295 + AT_rich Low_complexity Low_complexity 1 33 0 1718 198 5 49 chr5 111046279 111046333 -92039199 - MLT1A1 LTR MaLR -12 353 298 2022 118 7 0 chr5 111046333 111046646 -92038886 - AluSg SINE Alu 0 315 1 1718 198 5 49 chr5 111046646 111046959 -92038573 - MLT1A1 LTR MaLR -67 298 1 318 124 73 19 chr5 111047212 111047282 -92038250 - MLT1A2 LTR MaLR 0 374 297 7731 71 5 4 chr5 111047796 111048802 -92036730 - LTR13 LTR ERVK 0 1007 1 2266 70 39 0 chr5 111049473 111049759 -92035773 + AluY SINE Alu 1 297 -14 243 287 89 20 chr5 111051546 111051647 -92033885 - MIR SINE MIR -51 211 104 282 353 29 17 chr5 111052249 111052422 -92033110 - L2 LINE L2 -944 2370 2196 38 0 0 0 chr5 111052532 111052570 -92032962 + AT_rich Low_complexity Low_complexity 1 38 0 7657 24 0 0 chr5 111052570 111053800 -92031732 - L1PA3 LINE L1 -3 6152 4927 347 299 40 62 chr5 111053996 111054054 -92031478 + MER5B DNA MER1_type 6 64 -114 180 0 0 0 chr5 111054054 111054074 -92031458 + (CAAAT)n Simple_repeat Simple_repeat 1 20 0 347 299 40 62 chr5 111054074 111054192 -92031340 + MER5B DNA MER1_type 64 178 0 198 350 181 17 chr5 111054294 111054759 -92030773 + L2 LINE L2 2340 2880 -434 586 254 89 64 chr5 111056553 111056833 -92028699 + L2 LINE L2 3026 3312 -1 22 35 0 0 chr5 111057455 111057484 -92028048 + AT_rich Low_complexity Low_complexity 1 29 0 543 340 123 47 chr5 111058312 111059331 -92026201 - L2 LINE L2 -636 2678 1583 184 326 20 0 chr5 111060279 111060328 -92025204 - MIR SINE MIR -192 70 21 440 348 101 35 chr5 111060347 111060772 -92024760 - L2 LINE L2 -2345 969 517 213 341 92 60 chr5 111060972 111061289 -92024243 - L2 LINE L2 -2833 481 155 318 257 40 20 chr5 111061438 111061539 -92023993 - L2 LINE L2 -2 3270 3168 21 0 0 0 chr5 111061910 111061931 -92023601 + AT_rich Low_complexity Low_complexity 1 21 0 2308 46 0 0 chr5 111063014 111063325 -92022207 + AluY SINE Alu 1 311 0 2438 147 23 0 chr5 111064426 111064814 -92020718 + MSTB1 LTR MaLR 1 397 -35 448 344 78 9 chr5 111064827 111065045 -92020487 - MIR SINE MIR -8 254 22 205 239 0 0 chr5 111066657 111066703 -92018829 + L2 LINE L2 3258 3303 -10 610 289 76 5 chr5 111066982 111067193 -92018339 + MIR SINE MIR 29 254 -8 2030 107 21 0 chr5 111068445 111068609 -92016923 - AluY SINE Alu -15 296 122 279 0 0 0 chr5 111068609 111068640 -92016892 + (TG)n Simple_repeat Simple_repeat 2 32 0 2030 107 21 0 chr5 111068640 111068765 -92016767 - AluY SINE Alu -189 122 1 23 0 0 0 chr5 111069442 111069465 -92016067 + AT_rich Low_complexity Low_complexity 1 23 0 771 153 0 30 chr5 111069523 111069706 -92015826 - FLAM_C SINE Alu 0 179 1 2095 85 0 39 chr5 111071118 111071423 -92014109 + AluSg SINE Alu 1 293 -17 320 419 52 16 chr5 111072647 111072838 -92012694 + L2 LINE L2 3075 3272 0 730 354 83 28 chr5 111073900 111074403 -92011129 + L3 LINE CR1 1006 1536 -41 236 312 78 23 chr5 111074451 111074925 -92010607 + L1ME3 LINE L1 4742 5241 -905 598 346 55 24 chr5 111074956 111075497 -92010035 + L1ME3 LINE L1 5296 5853 -309 332 298 34 34 chr5 111076640 111076818 -92008714 - MIR SINE MIR -56 206 29 367 264 61 41 chr5 111077646 111077843 -92007689 - MER112 DNA MER1_type -59 201 1 963 232 81 18 chr5 111078107 111078392 -92007140 + MER58B DNA MER1_type 38 340 -1 605 209 41 77 chr5 111078437 111078633 -92006899 - MER63A DNA MER1_type -21 189 1 2154 120 0 9 chr5 111079240 111079556 -92005976 + AluSp SINE Alu 1 313 0 447 259 93 56 chr5 111079867 111080029 -92005503 + MIR SINE MIR 46 213 -49 975 132 38 6 chr5 111080492 111080651 -92004881 + MSTB LTR MaLR 161 324 -102 23 54 0 0 chr5 111080815 111080852 -92004680 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr5 111080890 111080924 -92004608 + AT_rich Low_complexity Low_complexity 1 34 0 1587 148 29 4 chr5 111081038 111081341 -92004191 - L1PA16 LINE L1 -10 6151 5814 4494 227 27 17 chr5 111081596 111081784 -92003748 + L1MC2 LINE L1 4295 4480 -1864 2279 77 7 3 chr5 111081784 111082082 -92003450 + AluY SINE Alu 1 299 -12 4494 227 27 17 chr5 111082082 111083904 -92001628 + L1MC2 LINE L1 4480 6319 -25 4509 226 47 32 chr5 111083917 111086005 -91999527 + L1MB7 LINE L1 3777 5898 -286 2397 60 3 28 chr5 111086038 111086357 -91999175 + AluY SINE Alu 1 311 0 881 268 166 12 chr5 111086357 111086767 -91998765 + L1ME3A LINE L1 5694 6166 -4 268 321 18 54 chr5 111087999 111088111 -91997421 + MER5B DNA MER1_type 1 108 -70 330 308 69 37 chr5 111088126 111088295 -91997237 - MIR SINE MIR -60 148 20 253 316 42 11 chr5 111088327 111088422 -91997110 + L3 LINE CR1 81 178 -1399 506 304 70 9 chr5 111088826 111089040 -91996492 + L2 LINE L2 3087 3313 0 1450 245 80 36 chr5 111089442 111089974 -91995558 - L1ME LINE L1 -410 5756 5213 312 120 0 0 chr5 111090339 111090389 -91995143 - L1MA4 LINE L1 -5 6295 6246 22 35 0 0 chr5 111090547 111090576 -91994956 + AT_rich Low_complexity Low_complexity 1 29 0 1739 167 28 0 chr5 111090577 111090864 -91994668 + L1M4c LINE L1 20 314 -6070 3053 200 60 12 chr5 111090872 111091692 -91993840 + L1M4c LINE L1 641 1499 -4885 490 138 11 0 chr5 111091692 111091779 -91993753 + L1M1 LINE L1 5706 5793 -510 2566 173 45 37 chr5 111091839 111092440 -91993092 + L1M4c LINE L1 1762 2367 -4017 1981 143 21 16 chr5 111092440 111092818 -91992714 + L1MB3 LINE L1 5800 6179 -4 2640 157 30 10 chr5 111092818 111093309 -91992223 + L1MA3 LINE L1 5627 6127 -178 348 24 0 0 chr5 111093309 111093350 -91992182 + (TTA)n Simple_repeat Simple_repeat 2 42 0 807 105 0 0 chr5 111093353 111093467 -91992065 - AluSg/x SINE Alu -30 280 167 1680 162 0 44 chr5 111093727 111094042 -91991490 + AluSx SINE Alu 1 301 -11 1201 71 0 0 chr5 111094355 111094509 -91991023 - L1PA7 LINE L1 0 6154 6001 2675 194 37 50 chr5 111094684 111096146 -91989386 - L1PB1 LINE L1 -1 6150 4774 1031 234 44 35 chr5 111096142 111096536 -91988996 + L1M2 LINE L1 1542 2029 -4819 * 2062 122 0 0 chr5 111096562 111096849 -91988683 + AluSx SINE Alu 4 290 -22 804 203 0 16 chr5 111096867 111097049 -91988483 - L1MA4 LINE L1 -19 6281 6103 496 308 85 15 chr5 111097166 111097426 -91988106 - L1MEc LINE L1 -4638 2484 2207 280 279 29 19 chr5 111097426 111097530 -91988002 - L1MEc LINE L1 -5135 1288 1184 732 164 0 30 chr5 111099161 111099295 -91986237 + FLAM_C SINE Alu 1 130 -13 23 0 0 0 chr5 111099529 111099552 -91985980 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 111099773 111099817 -91985715 + AT_rich Low_complexity Low_complexity 1 44 0 495 256 60 15 chr5 111099938 111100071 -91985461 + MER5A DNA MER1_type 1 139 -50 681 247 42 12 chr5 111100192 111100358 -91985174 + MER5B DNA MER1_type 8 178 0 2552 52 0 0 chr5 111100791 111101096 -91984436 + AluY SINE Alu 1 305 -6 450 306 49 71 chr5 111101339 111101846 -91983686 + L1MEc LINE L1 2158 2614 -3601 213 115 39 19 chr5 111102714 111102766 -91982766 + (TATAA)n Simple_repeat Simple_repeat 4 56 0 1084 129 12 6 chr5 111102843 111103014 -91982518 + L1M1 LINE L1 5438 5609 -693 208 200 22 0 chr5 111103506 111103551 -91981981 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 303 338 0 7 chr5 111103814 111103950 -91981582 - HAL1 LINE L1 -994 1513 1379 1099 168 11 0 chr5 111105641 111105826 -91979706 + L1MC1 LINE L1 5426 5612 -721 930 45 0 0 chr5 111105838 111105950 -91979582 - L1PA3 LINE L1 -3 6152 6041 3739 135 48 57 chr5 111105950 111106693 -91978839 + L1MC1 LINE L1 5595 6331 -2 24 32 0 0 chr5 111107483 111107514 -91978018 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 111108181 111108202 -91977330 + AT_rich Low_complexity Low_complexity 1 21 0 960 284 122 33 chr5 111108976 111109395 -91976137 + MLT1F LTR MaLR 85 540 -2 6022 200 33 31 chr5 111109487 111110262 -91975270 + L1MA9 LINE L1 3789 4561 -1751 1963 152 48 22 chr5 111110262 111110617 -91974915 - THE1B LTR MaLR 0 364 1 11126 110 6 2 chr5 111110617 111112191 -91973341 - THE1B-int LTR MaLR 0 1580 1 2016 129 47 44 chr5 111112191 111112554 -91972978 - THE1B LTR MaLR 0 364 1 6022 200 33 31 chr5 111112554 111113900 -91971632 + L1MA9 LINE L1 4560 5932 -380 273 232 188 18 chr5 111114019 111114131 -91971401 + MIR SINE MIR 96 226 -36 24 0 0 0 chr5 111114370 111114394 -91971138 + AT_rich Low_complexity Low_complexity 1 24 0 185 320 0 27 chr5 111114647 111114722 -91970810 - L2 LINE L2 -259 3054 2982 28 29 0 0 chr5 111115096 111115131 -91970401 + AT_rich Low_complexity Low_complexity 1 35 0 303 234 78 0 chr5 111115586 111115663 -91969869 - L1MC4 LINE L1 -1347 6695 6613 755 181 0 5 chr5 111115670 111116109 -91969423 + (TA)n Simple_repeat Simple_repeat 1 436 0 29 28 0 0 chr5 111116110 111116146 -91969386 + AT_rich Low_complexity Low_complexity 1 36 0 720 156 0 0 chr5 111116146 111116326 -91969206 + (TA)n Simple_repeat Simple_repeat 1 180 0 2102 98 3 7 chr5 111117092 111117378 -91968154 - AluSx SINE Alu -13 299 15 24 32 0 0 chr5 111117763 111117794 -91967738 + AT_rich Low_complexity Low_complexity 1 31 0 333 263 0 40 chr5 111119650 111119749 -91965783 - MLT2E LTR ERVL -2 626 532 263 112 90 0 chr5 111120221 111120272 -91965260 - MLT2A1 LTR ERVL 0 520 389 538 65 59 30 chr5 111120286 111120455 -91965077 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 2735 74 22 30 chr5 111120689 111121095 -91964437 - MLT2A1 LTR ERVL -41 403 1 2248 103 0 10 chr5 111121841 111122142 -91963390 + AluSx SINE Alu 2 299 -13 790 231 136 63 chr5 111122142 111122411 -91963121 - MER65C LTR ERV1 -19 442 129 2133 81 0 0 chr5 111122411 111122732 -91962800 + AluY SINE Alu 15 335 0 790 231 136 63 chr5 111122732 111122872 -91962660 - MER65C LTR ERV1 -332 129 1 431 317 91 45 chr5 111122872 111123488 -91962044 - MER65C-int LTR ERV1 -8 4863 4220 262 308 19 9 chr5 111123837 111123944 -91961588 - MER51-int LTR ERV1 -1287 6529 6422 21 57 0 0 chr5 111125755 111125790 -91959742 + AT_rich Low_complexity Low_complexity 1 35 0 7607 90 6 7 chr5 111125951 111127036 -91958496 + L1P LINE L1 3991 5073 -1073 1957 210 48 26 chr5 111127034 111127379 -91958153 - L1ME1 LINE L1 -334 5832 5496 * 203 79 26 0 chr5 111127379 111127417 -91958115 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2168 82 7 0 chr5 111127418 111127697 -91957835 - AluSp SINE Alu -32 281 1 1957 210 48 26 chr5 111127697 111127844 -91957688 - L1ME1 LINE L1 -669 5497 5327 421 366 68 10 chr5 111128640 111129039 -91956493 + L1MEc LINE L1 60 481 -5915 300 316 103 19 chr5 111129214 111129369 -91956163 + L1MEc LINE L1 750 917 -5479 6640 65 12 0 chr5 111129386 111130559 -91954973 + L1PA7 LINE L1 4967 6151 -3 488 305 47 47 chr5 111130624 111131053 -91954479 + L1MEc LINE L1 947 1375 -4840 253 243 14 0 chr5 111131053 111131127 -91954405 + (TAA)n Simple_repeat Simple_repeat 3 77 0 1175 201 0 64 chr5 111131483 111131766 -91953766 + MLT1B LTR MaLR 3 267 -123 1131 276 123 20 chr5 111131786 111132283 -91953249 - L1ME1 LINE L1 -205 5961 5414 823 273 55 3 chr5 111132268 111132557 -91952975 - L1ME1 LINE L1 -1009 5137 4834 * 25 0 0 0 chr5 111134713 111134738 -91950794 + AT_rich Low_complexity Low_complexity 1 25 0 605 271 102 63 chr5 111134833 111135269 -91950263 + MLT1H LTR MaLR 56 544 -5 255 61 0 0 chr5 111135269 111135302 -91950230 + (CA)n Simple_repeat Simple_repeat 2 34 0 215 274 0 32 chr5 111135580 111135642 -91949890 + MIR SINE MIR 81 140 -122 224 128 0 64 chr5 111135676 111135723 -91949809 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 24 67 0 0 chr5 111135865 111135910 -91949622 + AT_rich Low_complexity Low_complexity 1 45 0 9981 29 1 0 chr5 111136757 111138746 -91946786 - L1PA3 LINE L1 -3 6152 4193 23 33 0 0 chr5 111138763 111138793 -91946739 + AT_rich Low_complexity Low_complexity 1 30 0 2409 316 50 44 chr5 111138917 111140505 -91945027 + L1PBa LINE L1 2 1599 -5264 * 5080 226 39 30 chr5 111140504 111142818 -91942714 + L1PBb LINE L1 16 2450 -3753 324 172 0 16 chr5 111142816 111142880 -91942652 + L1PB1 LINE L1 11 73 -6790 * 10878 205 25 21 chr5 111142872 111145725 -91939807 + L1PB1 LINE L1 928 4011 -2851 2137 129 0 0 chr5 111145725 111146037 -91939495 + AluSx SINE Alu 1 312 0 10878 205 25 21 chr5 111146037 111147453 -91938079 + L1PB1 LINE L1 4011 5419 -1443 5936 96 16 16 chr5 111147455 111148157 -91937375 + L1PB1 LINE L1 5800 6501 -366 1014 146 0 0 chr5 111148157 111148328 -91937204 + (TA)n Simple_repeat Simple_repeat 2 172 0 255 31 0 0 chr5 111148327 111148359 -91937173 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 5936 96 16 16 chr5 111148328 111148724 -91936808 + L1PB1 LINE L1 6500 6867 0 1577 234 0 0 chr5 111148739 111149081 -91936451 + L1 LINE L1 2377 2718 -3428 21 0 0 0 chr5 111149161 111149182 -91936350 + AT_rich Low_complexity Low_complexity 1 21 0 436 96 110 0 chr5 111149267 111149340 -91936192 - L1MA6 LINE L1 -182 6118 6038 963 123 41 6 chr5 111149343 111149514 -91936018 + L1MA6 LINE L1 6118 6294 -6 180 77 0 0 chr5 111150041 111150067 -91935465 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1868 172 16 29 chr5 111150239 111150623 -91934909 + L1PB4 LINE L1 5777 6155 -1 4524 99 14 1 chr5 111151023 111151672 -91933860 - L1PA11 LINE L1 -1 6173 5517 346 91 73 0 chr5 111151700 111151755 -91933777 - L1PA11 LINE L1 -1972 4174 4116 * 9007 187 73 6 chr5 111151750 111154538 -91930994 - L1P4 LINE L1 -659 5515 2373 276 330 23 0 chr5 111154550 111154638 -91930894 - L2 LINE L2 -46 3267 3178 317 330 29 0 chr5 111155093 111155196 -91930336 + L2 LINE L2 2366 2471 -843 489 293 31 52 chr5 111155309 111155500 -91930032 + MER5A DNA MER1_type 2 188 -1 1136 183 50 109 chr5 111156698 111157125 -91928407 - MER67C LTR ERV1 -28 486 112 2578 47 19 0 chr5 111157125 111157447 -91928085 - L1PA5 LINE L1 -5 6149 5822 1136 183 50 109 chr5 111157447 111157548 -91927984 - MER67C LTR ERV1 -402 112 7 189 339 70 17 chr5 111158864 111158979 -91926553 + L2 LINE L2 3193 3313 0 21 0 0 0 chr5 111159002 111159023 -91926509 + AT_rich Low_complexity Low_complexity 1 21 0 268 221 158 0 chr5 111159258 111159385 -91926147 + MER113 DNA MER1_type? 37 183 -338 325 248 0 79 chr5 111159408 111159509 -91926023 + Charlie1 DNA MER1_type 1 93 -2668 1776 184 52 79 chr5 111159525 111160068 -91925464 + Charlie1 DNA MER1_type 2207 2734 -27 477 184 70 9 chr5 111160173 111160287 -91925245 + MER113 DNA MER1_type? 331 451 -70 210 118 0 0 chr5 111161024 111161058 -91924474 + (TA)n Simple_repeat Simple_repeat 2 35 0 345 323 24 48 chr5 111161090 111161214 -91924318 + L2 LINE L2 3191 3311 -2 368 280 126 28 chr5 111161703 111161846 -91923686 - L2 LINE L2 -1 3312 3156 354 290 123 19 chr5 111162035 111162197 -91923335 - MIR SINE MIR -2 260 82 366 281 70 0 chr5 111162816 111162930 -91922602 - L2 LINE L2 -2 3311 3190 202 313 71 30 chr5 111164518 111164617 -91920915 + L2 LINE L2 3168 3270 -2 371 359 107 13 chr5 111164861 111165170 -91920362 + L2 LINE L2 2412 2749 -565 309 149 0 0 chr5 111165170 111165217 -91920315 - MER3 DNA MER1_type 0 209 163 804 146 0 0 chr5 111165229 111165339 -91920193 + FLAM_C SINE Alu 3 112 -31 231 232 0 45 chr5 111165344 111165456 -91920076 + (TATATG)n Simple_repeat Simple_repeat 2 108 0 715 259 0 24 chr5 111165463 111165633 -91919899 + FRAM SINE Alu 2 167 -9 1556 148 0 0 chr5 111165701 111165930 -91919602 - AluJb SINE Alu -80 232 4 614 193 9 0 chr5 111165933 111166042 -91919490 - MER3 DNA MER1_type -97 112 3 822 161 0 7 chr5 111166108 111166251 -91919281 - AluSg/x SINE Alu -15 295 154 938 219 51 33 chr5 111166595 111166810 -91918722 + AluJo SINE Alu 1 219 -93 381 121 36 0 chr5 111166924 111167007 -91918525 + GA-rich Low_complexity Low_complexity 1 86 0 257 294 91 80 chr5 111168553 111168951 -91916581 - MLT1I LTR MaLR -4 405 4 662 252 97 97 chr5 111170457 111170798 -91914734 - MLT1L LTR MaLR -236 379 39 357 320 165 16 chr5 111171094 111171288 -91914244 + MIR SINE MIR 18 240 -22 327 243 27 0 chr5 111171456 111171567 -91913965 + (TA)n Simple_repeat Simple_repeat 1 114 0 22 0 0 0 chr5 111172926 111172948 -91912584 + AT_rich Low_complexity Low_complexity 1 22 0 490 317 72 71 chr5 111173007 111173553 -91911979 - L2 LINE L2 0 3272 2733 846 308 49 62 chr5 111173715 111174131 -91911401 + LTR16B LTR ERVL 1 412 -52 1790 185 20 57 chr5 111174131 111174536 -91910996 - MLT1B LTR MaLR 0 390 1 846 308 49 62 chr5 111174536 111174587 -91910945 + LTR16B LTR ERVL 412 462 -2 25 0 0 0 chr5 111176045 111176070 -91909462 + AT_rich Low_complexity Low_complexity 1 25 0 2151 111 17 3 chr5 111176825 111177122 -91908410 - AluSg SINE Alu -7 303 3 406 249 170 12 chr5 111177206 111177284 -91908248 + MER58C DNA MER1_type 1 65 -2355 266 87 22 0 chr5 111177284 111177330 -91908202 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 406 249 170 12 chr5 111177330 111177416 -91908116 + MER58C DNA MER1_type 65 191 -24 36099 40 2 7 chr5 111177445 111182750 -91902782 - L1PA4 LINE L1 -1 6154 863 315 255 51 76 chr5 111183505 111183662 -91901870 - L2 LINE L2 -47 3266 3114 841 233 11 11 chr5 111183771 111183960 -91901572 - MER5A DNA MER1_type 0 189 1 383 304 80 22 chr5 111183981 111184119 -91901413 - MER5B DNA MER1_type -22 156 11 33 30 0 45 chr5 111184488 111184554 -91900978 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr5 111184910 111184932 -91900600 + AT_rich Low_complexity Low_complexity 1 22 0 888 73 0 0 chr5 111184938 111185061 -91900471 - L1PA13 LINE L1 -6 6157 6035 348 94 0 0 chr5 111185094 111185147 -91900385 + (TG)n Simple_repeat Simple_repeat 1 53 0 225 191 32 16 chr5 111185566 111185629 -91899903 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 5795 238 38 14 chr5 111185754 111186386 -91899146 + L1MA9 LINE L1 2221 2836 -3310 1837 197 95 3 chr5 111186386 111186777 -91898755 + MSTA LTR MaLR 2 428 0 5795 238 38 14 chr5 111186777 111187811 -91897721 + L1MA9 LINE L1 2836 3928 -2218 3338 187 10 72 chr5 111187822 111188266 -91897266 + L1MA9 LINE L1 5131 5601 -711 2479 135 3 3 chr5 111188266 111188630 -91896902 - THE1B LTR MaLR 0 364 1 3338 187 10 72 chr5 111188630 111188656 -91896876 + L1MA9 LINE L1 5601 5627 -685 350 42 21 0 chr5 111188656 111188704 -91896828 + (TA)n Simple_repeat Simple_repeat 2 50 0 3338 187 10 72 chr5 111188704 111189288 -91896244 + L1MA9 LINE L1 5627 6312 0 264 320 98 16 chr5 111189789 111189871 -91895661 - L2 LINE L2 0 3313 3216 204 40 0 0 chr5 111189871 111189896 -91895636 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 264 320 98 16 chr5 111189896 111189935 -91895597 - L2 LINE L2 -97 3216 3182 322 257 29 44 chr5 111190046 111190182 -91895350 - L1MC4 LINE L1 0 8042 7909 2285 254 66 104 chr5 111190231 111192154 -91893378 - L1MC4a LINE L1 -378 7430 5584 341 232 32 72 chr5 111192201 111192326 -91893206 - L2 LINE L2 0 3313 3194 228 143 0 0 chr5 111192326 111192368 -91893164 + (TA)n Simple_repeat Simple_repeat 2 43 0 314 214 23 122 chr5 111193115 111193246 -91892286 + MLT1E2 LTR MaLR 28 145 -481 1181 242 69 75 chr5 111193315 111193927 -91891605 - L1M4 LINE L1 -2101 4045 3438 236 247 0 7 chr5 111194057 111194207 -91891325 + (TA)n Simple_repeat Simple_repeat 1 149 0 21 57 0 0 chr5 111194607 111194642 -91890890 + AT_rich Low_complexity Low_complexity 1 35 0 203 175 0 0 chr5 111194720 111194760 -91890772 + T-rich Low_complexity Low_complexity 1 40 0 7656 25 0 0 chr5 111194765 111195999 -91889533 - L1PA2 LINE L1 0 6155 4922 3959 25 0 0 chr5 111195999 111196472 -91889060 + L1P LINE L1 4400 4872 -1274 2152 124 3 0 chr5 111196695 111197002 -91888530 - AluSx SINE Alu -4 308 1 206 277 84 36 chr5 111197477 111197560 -91887972 - MIR SINE MIR -100 162 76 2527 48 0 0 chr5 111197775 111198084 -91887448 - L1PA5 LINE L1 -9 6145 5837 2505 35 0 0 chr5 111198084 111198400 -91887132 + L1P LINE L1 5027 5342 -804 270 281 12 12 chr5 111199052 111199134 -91886398 - MLT1L LTR MaLR -386 229 148 42 40 0 14 chr5 111199615 111199629 -91885903 + AT_rich Low_complexity Low_complexity 1 14 -59 564 124 0 0 chr5 111199629 111199726 -91885806 + L1MA4 LINE L1 6201 6297 -3 42 40 0 14 chr5 111199726 111199785 -91885747 + AT_rich Low_complexity Low_complexity 14 73 0 189 344 0 43 chr5 111201175 111201268 -91884264 + L2 LINE L2 3184 3272 0 1704 262 91 20 chr5 111201861 111201940 -91883592 - HsTC2c DNA Tc2 -1203 695 623 1981 140 0 10 chr5 111201940 111202240 -91883292 - AluSq SINE Alu -16 297 1 1704 262 91 20 chr5 111202240 111202809 -91882723 - HsTC2c DNA Tc2 -1275 623 1 3103 80 40 0 chr5 111202837 111203264 -91882268 - MLT2A1 LTR ERVL 0 444 1 2050 112 0 3 chr5 111203418 111203744 -91881788 - AluSq SINE Alu 0 325 1 554 151 0 0 chr5 111203985 111204071 -91881461 + AluS SINE Alu 1 86 -227 21 95 0 0 chr5 111205094 111205157 -91880375 + AT_rich Low_complexity Low_complexity 1 63 0 15591 155 19 12 chr5 111205387 111207934 -91877598 - Tigger2 DNA MER2_type -2 2716 147 2129 122 0 0 chr5 111207934 111208228 -91877304 - AluSx SINE Alu -18 294 1 15591 155 19 12 chr5 111208228 111208377 -91877155 - Tigger2 DNA MER2_type -2571 147 1 220 323 198 10 chr5 111209513 111209609 -91875923 + MIR SINE MIR 13 126 -136 653 373 76 6 chr5 111209707 111210061 -91875471 - MLT1I LTR MaLR -6 403 25 261 0 0 0 chr5 111210139 111210168 -91875364 + (TA)n Simple_repeat Simple_repeat 1 29 0 425 295 12 30 chr5 111210184 111210350 -91875182 - Charlie8 DNA MER1_type -2156 261 99 2673 7 0 0 chr5 111210356 111210651 -91874881 + AluY SINE Alu 1 295 -16 21 0 0 0 chr5 111210743 111210764 -91874768 + AT_rich Low_complexity Low_complexity 1 21 0 2248 95 7 3 chr5 111210841 111211135 -91874397 + AluSc SINE Alu 1 295 -14 384 276 35 41 chr5 111211198 111211343 -91874189 - MARNA DNA Mariner -415 171 28 1465 106 20 0 chr5 111213123 111213321 -91872211 + AluSg/x SINE Alu 76 277 -35 22 0 0 0 chr5 111214204 111214226 -91871306 + AT_rich Low_complexity Low_complexity 1 22 0 186 348 26 26 chr5 111214231 111214346 -91871186 - MER5B DNA MER1_type -63 115 1 505 292 35 7 chr5 111214522 111214666 -91870866 - MIR SINE MIR -49 213 66 21 36 0 0 chr5 111215173 111215201 -91870331 + AT_rich Low_complexity Low_complexity 1 28 0 855 206 71 93 chr5 111215476 111216080 -91869452 - MER67C LTR ERV1 -4 510 1 274 235 25 0 chr5 111216163 111216244 -91869288 - L1MC4 LINE L1 -1346 6696 6614 289 113 56 0 chr5 111216244 111216315 -91869217 + (TCTA)n Simple_repeat Simple_repeat 1 75 0 359 278 0 0 chr5 111216320 111216410 -91869122 - L1MC4 LINE L1 -1339 6703 6614 951 115 0 0 chr5 111216413 111216632 -91868900 + (TA)n Simple_repeat Simple_repeat 1 219 0 216 0 0 0 chr5 111216954 111216978 -91868554 + (T)n Simple_repeat Simple_repeat 1 24 0 265 273 65 13 chr5 111217857 111217934 -91867598 - MLT1J LTR MaLR -202 309 229 774 285 114 88 chr5 111217965 111218499 -91867033 - MLT1F LTR MaLR 0 595 2 232 284 14 0 chr5 111219575 111219649 -91865883 - MLT1-int LTR MaLR -878 493 419 375 287 29 50 chr5 111219705 111219847 -91865685 - MLT1H1 LTR MaLR -383 172 36 232 219 47 0 chr5 111219908 111219972 -91865560 - MLT1L LTR MaLR -339 276 210 275 363 82 25 chr5 111221937 111222182 -91863350 + MIR SINE MIR 1 259 -3 727 332 73 70 chr5 111222522 111223482 -91862050 - L2 LINE L2 -8 3305 2341 1353 160 3 102 chr5 111223482 111223795 -91861737 + AluJb SINE Alu 1 282 -30 727 332 73 70 chr5 111223795 111223939 -91861593 - L2 LINE L2 -972 2341 2199 728 336 68 22 chr5 111224199 111224643 -91860889 - L2 LINE L2 -1107 2207 1744 675 46 0 11 chr5 111224698 111224785 -91860747 + AluSp/q SINE Alu 211 296 -17 329 148 161 0 chr5 111224812 111224893 -91860639 - L1P LINE L1 -810 5356 5263 1075 153 79 13 chr5 111224895 111225124 -91860408 + L1PA16 LINE L1 5923 6166 0 4757 106 0 9 chr5 111226139 111226825 -91858707 - L1PA8A LINE L1 -1 6130 5451 2039 112 16 26 chr5 111227901 111228214 -91857318 + AluSg SINE Alu 1 310 0 335 341 61 31 chr5 111228394 111228552 -91856980 - L1ME3A LINE L1 -301 5869 5695 3457 204 23 63 chr5 111228552 111229562 -91855970 + LTR5 LTR ERVK 1 969 0 335 341 61 31 chr5 111229562 111229647 -91855885 - L1ME3A LINE L1 -475 5695 5614 328 285 99 47 chr5 111230271 111230443 -91855089 - MLT1J1 LTR MaLR -146 300 120 2179 173 47 9 chr5 111230562 111230984 -91854548 + HSMAR2 DNA Mariner 2 439 -863 474 210 60 0 chr5 111230984 111231084 -91854448 + HSMAR2 DNA Mariner 874 979 -323 1935 155 0 7 chr5 111231262 111231572 -91853960 + AluSg SINE Alu 1 308 -2 9103 199 28 2 chr5 111231598 111234040 -91851492 - L1PA13 LINE L1 -1 6162 3645 291 85 0 0 chr5 111234040 111234087 -91851445 + (TG)n Simple_repeat Simple_repeat 2 48 0 9103 199 28 2 chr5 111234087 111234408 -91851124 - L1PA13 LINE L1 -2518 3645 3334 307 285 42 126 chr5 111235724 111235900 -91849632 + L1MEd LINE L1 620 809 -5310 2897 149 31 23 chr5 111235900 111236423 -91849109 + MER1A DNA MER1_type 1 527 0 307 285 42 126 chr5 111236423 111236698 -91848834 + L1MEd LINE L1 809 1033 -5086 1136 291 62 40 chr5 111236715 111237168 -91848364 - L2 LINE L2 -769 2545 2083 223 337 11 22 chr5 111237217 111237306 -91848226 + MIR SINE MIR 23 110 -152 225 306 80 83 chr5 111237327 111237641 -91847891 + L2 LINE L2 2982 3294 -19 333 102 0 0 chr5 111237997 111238056 -91847476 + (CA)n Simple_repeat Simple_repeat 1 59 0 34 55 0 0 chr5 111238829 111238884 -91846648 + AT_rich Low_complexity Low_complexity 1 55 0 371 296 49 31 chr5 111238978 111239140 -91846392 - ERVL LTR ERVL -2769 2995 2831 2573 216 11 7 chr5 111239165 111239711 -91845821 + L1PA13 LINE L1 1369 1916 -4871 443 273 36 14 chr5 111239733 111239872 -91845660 - ERVL LTR ERVL -3426 2228 2087 407 269 93 9 chr5 111240822 111240993 -91844539 - LTR16C LTR ERVL 0 491 274 201 39 0 0 chr5 111241925 111241951 -91843581 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 369 312 43 22 chr5 111241987 111242216 -91843316 + L1M4 LINE L1 5191 5426 -743 1269 236 56 59 chr5 111242263 111242636 -91842896 + MLT1D LTR MaLR 134 505 0 226 214 29 35 chr5 111243811 111243984 -91841548 + (TA)n Simple_repeat Simple_repeat 1 172 0 203 253 0 13 chr5 111244023 111244098 -91841434 + (TA)n Simple_repeat Simple_repeat 2 75 0 743 72 0 0 chr5 111245253 111245350 -91840182 + AluY SINE Alu 198 294 -17 1410 162 31 0 chr5 111245726 111246100 -91839432 + L1M2 LINE L1 5105 5487 -743 338 351 0 11 chr5 111247043 111247137 -91838395 - MER91A DNA MER1_type -99 97 5 297 126 68 29 chr5 111247388 111247491 -91838041 + (TA)n Simple_repeat Simple_repeat 2 108 0 26 0 0 0 chr5 111247560 111247586 -91837946 + AT_rich Low_complexity Low_complexity 1 26 0 235 167 30 0 chr5 111247905 111247971 -91837561 + (TA)n Simple_repeat Simple_repeat 2 69 0 294 73 0 0 chr5 111247971 111248012 -91837520 + (CA)n Simple_repeat Simple_repeat 2 42 0 30 0 0 0 chr5 111249381 111249411 -91836121 + AT_rich Low_complexity Low_complexity 1 30 0 318 214 18 54 chr5 111249583 111249695 -91835837 + (TA)n Simple_repeat Simple_repeat 1 108 0 24 32 0 0 chr5 111249739 111249770 -91835762 + AT_rich Low_complexity Low_complexity 1 31 0 395 309 47 26 chr5 111250003 111250194 -91835338 - MLT1I LTR MaLR -139 270 76 603 324 69 39 chr5 111250316 111250723 -91834809 + L2 LINE L2 1851 2269 -1045 6774 63 16 0 chr5 111250881 111251553 -91833979 - L1PA7 LINE L1 -2 6152 5493 2137 131 3 0 chr5 111251553 111251858 -91833674 - AluSp SINE Alu -7 306 1 6774 63 16 0 chr5 111251858 111252610 -91832922 - L1PA7 LINE L1 -661 5493 4727 4666 107 9 0 chr5 111252610 111253294 -91832238 + L1PA7 LINE L1 4029 4718 -1428 760 339 71 19 chr5 111253294 111253672 -91831860 + L2 LINE L2 2458 2855 -459 22 70 0 0 chr5 111253847 111253890 -91831642 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr5 111254551 111254592 -91830940 + AT_rich Low_complexity Low_complexity 1 41 0 246 374 9 0 chr5 111254731 111254838 -91830694 - L2 LINE L2 -92 3221 3114 188 366 44 44 chr5 111255101 111255284 -91830248 - L2 LINE L2 -572 2742 2560 37 39 0 0 chr5 111255817 111255868 -91829664 + AT_rich Low_complexity Low_complexity 1 51 0 222 283 22 22 chr5 111257112 111257204 -91828328 - MIR SINE MIR -99 163 72 234 350 48 10 chr5 111257931 111258034 -91827498 + L2 LINE L2 3188 3294 -19 2411 84 7 0 chr5 111258520 111258828 -91826704 - AluSq SINE Alu -3 310 1 545 138 0 0 chr5 111259006 111259086 -91826446 + FRAM SINE Alu 22 101 -75 958 240 100 17 chr5 111261085 111261474 -91824058 + MER39 LTR ERV1 1 583 -124 794 183 104 0 chr5 111261644 111261808 -91823724 + MER61A LTR ERV1 1 181 -162 310 54 0 0 chr5 111261825 111261862 -91823670 - MER61-int LTR ERV1 -2425 2792 2756 17214 100 17 10 chr5 111261875 111264646 -91820886 + MER61A-int LTR ERV1 2383 5216 -1 1835 151 54 21 chr5 111264647 111264979 -91820553 + MER61A LTR ERV1 1 343 0 1132 195 38 104 chr5 111265180 111265575 -91819957 + MLT2D LTR ERVL 5 373 -41 347 300 0 0 chr5 111265578 111265668 -91819864 - L1MC4 LINE L1 -1339 6703 6614 239 137 0 20 chr5 111265678 111265729 -91819803 - LTR66 LTR ERVL -171 439 390 256 109 0 109 chr5 111265763 111265818 -91819714 + MLT2B1 LTR ERVL 458 506 -14 1288 78 0 39 chr5 111267128 111267308 -91818224 - AluY SINE Alu -7 304 132 411 257 47 125 chr5 111267443 111268001 -91817531 + L1MC4a LINE L1 7258 7683 -125 293 232 0 14 chr5 111268204 111268273 -91817259 - MER69 DNA AcHobo -1 2525 2458 1344 7 0 0 chr5 111268274 111268426 -91817106 + L1HS LINE L1 6004 6155 0 22 56 0 0 chr5 111268436 111268472 -91817060 + AT_rich Low_complexity Low_complexity 1 36 0 828 267 38 65 chr5 111268584 111268955 -91816577 - LTR16A LTR ERVL -76 374 14 405 252 9 0 chr5 111269478 111269585 -91815947 - MER69 DNA AcHobo -268 2258 2151 621 247 21 0 chr5 111269617 111269807 -91815725 - MER69 DNA AcHobo -444 2082 1889 686 282 86 9 chr5 111269809 111270029 -91815503 - MER69 DNA AcHobo -2083 443 207 281 234 31 0 chr5 111270024 111270088 -91815444 - MER69 DNA AcHobo -2458 68 3 * 2303 95 0 0 chr5 111272408 111272704 -91812828 + AluSc SINE Alu 1 296 -13 600 282 13 0 chr5 111272712 111272861 -91812671 + MER63A DNA MER1_type 60 210 0 21 36 0 0 chr5 111273384 111273412 -91812120 + AT_rich Low_complexity Low_complexity 1 28 0 1382 200 20 27 chr5 111273615 111273910 -91811622 - THE1B LTR MaLR 0 364 72 2017 122 7 10 chr5 111273948 111274244 -91811288 + AluSx SINE Alu 1 295 -17 587 223 8 0 chr5 111275434 111275555 -91809977 + L1M4 LINE L1 7 128 -6414 360 302 66 39 chr5 111275726 111275984 -91809548 - L1M4 LINE L1 -1552 4594 4330 334 372 30 25 chr5 111276203 111276402 -91809130 - MIR3 SINE MIR -3 205 6 22 70 0 0 chr5 111278624 111278667 -91806865 + AT_rich Low_complexity Low_complexity 1 43 0 3678 157 26 41 chr5 111279082 111279959 -91805573 + pTR5 LTR ERV1 6 277 -437 254 265 31 20 chr5 111279959 111280057 -91805475 + LTR30 LTR ERV1 544 642 -80 2367 101 3 0 chr5 111280057 111280383 -91805149 + pTR5 LTR ERV1 66 392 -2046 297 286 24 24 chr5 111280432 111280516 -91805016 + L2 LINE L2 3187 3270 -2 257 291 246 0 chr5 111281538 111281648 -91803884 - MER91C DNA MER1_type 0 140 4 287 313 81 0 chr5 111282052 111282151 -91803381 + L2 LINE L2 3116 3222 -50 9130 45 3 0 chr5 111282309 111283441 -91802091 - L1P LINE L1 -1779 4367 3232 2747 92 0 13 chr5 111285418 111285798 -91799734 - THE1C LTR MaLR 0 375 1 2448 153 30 0 chr5 111286969 111287368 -91798164 - MSTA LTR MaLR 0 428 18 4778 172 34 6 chr5 111287378 111288225 -91797307 - MSTA-int LTR MaLR -5 1646 776 279 0 0 0 chr5 111288239 111288270 -91797262 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1991 118 0 11 chr5 111288271 111288551 -91796981 - AluSc SINE Alu -32 277 1 1134 158 0 5 chr5 111288563 111288753 -91796779 - MSTA LTR MaLR -239 189 1 420 324 65 16 chr5 111289106 111289291 -91796241 - MIR SINE MIR -43 219 26 1655 175 19 25 chr5 111290455 111290769 -91794763 + AluJb SINE Alu 1 312 0 281 278 124 47 chr5 111290926 111291095 -91794437 + MIR SINE MIR 32 213 -49 30 59 0 0 chr5 111291396 111291447 -91794085 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr5 111291656 111291678 -91793854 + AT_rich Low_complexity Low_complexity 1 22 0 659 288 59 14 chr5 111291984 111292203 -91793329 - MIR SINE MIR -26 236 8 25 0 0 0 chr5 111292460 111292485 -91793047 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr5 111292599 111292659 -91792873 + AT_rich Low_complexity Low_complexity 1 60 0 1291 181 15 0 chr5 111292896 111293166 -91792366 - L1MA4 LINE L1 -4 6296 6023 218 231 19 0 chr5 111293579 111293631 -91791901 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 7456 31 2 1 chr5 111293841 111295526 -91790006 + L1PA4 LINE L1 4468 6154 -1 411 267 158 0 chr5 111295555 111295641 -91789891 - MER58C DNA MER1_type -2229 191 120 266 87 22 0 chr5 111295641 111295687 -91789845 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 411 267 158 0 chr5 111295687 111295765 -91789767 - MER58C DNA MER1_type -2300 120 1 2113 118 16 3 chr5 111295848 111296152 -91789380 + AluSg SINE Alu 3 310 0 25 0 0 0 chr5 111296899 111296924 -91788608 + AT_rich Low_complexity Low_complexity 1 25 0 220 217 0 0 chr5 111297362 111297408 -91788124 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 833 308 49 62 chr5 111298380 111298431 -91787101 - LTR16B LTR ERVL -2 462 412 1780 185 20 57 chr5 111298431 111298836 -91786696 + MLT1B LTR MaLR 1 390 0 833 308 49 62 chr5 111298836 111299252 -91786280 - LTR16B LTR ERVL -52 412 1 507 314 68 76 chr5 111299414 111299961 -91785571 + L2 LINE L2 2733 3272 0 22 0 0 0 chr5 111300020 111300042 -91785490 + AT_rich Low_complexity Low_complexity 1 22 0 327 243 27 0 chr5 111301401 111301512 -91784020 + (TA)n Simple_repeat Simple_repeat 1 114 0 329 323 164 20 chr5 111301680 111301875 -91783657 - MIR SINE MIR -22 240 18 657 288 59 14 chr5 111302284 111302503 -91783029 - MIR SINE MIR -26 236 8 25 0 0 0 chr5 111302760 111302785 -91782747 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr5 111302899 111302959 -91782573 + AT_rich Low_complexity Low_complexity 1 60 0 1305 181 15 0 chr5 111303196 111303466 -91782066 - L1MA4 LINE L1 -4 6296 6023 7020 60 18 1 chr5 111304140 111305811 -91779721 + L1PA5 LINE L1 4468 6153 -1 976 97 0 8 chr5 111306046 111306180 -91779352 + AluSq/x SINE Alu 1 133 -180 24 67 0 0 chr5 111306881 111306926 -91778606 + AT_rich Low_complexity Low_complexity 1 45 0 655 264 54 16 chr5 111307076 111307334 -91778198 - MER20B DNA MER1_type -2 781 514 1138 167 13 13 chr5 111307453 111307680 -91777852 + L1PA16 LINE L1 5940 6166 0 1489 173 40 14 chr5 111307869 111308180 -91777352 - AluJb SINE Alu 0 318 1 432 0 0 0 chr5 111308333 111308381 -91777151 + (TG)n Simple_repeat Simple_repeat 1 48 0 460 305 119 13 chr5 111308390 111308708 -91776824 - MER20B DNA MER1_type -258 525 174 22 35 0 0 chr5 111309332 111309361 -91776171 + AT_rich Low_complexity Low_complexity 1 29 0 395 209 9 0 chr5 111309394 111309504 -91776028 + (TA)n Simple_repeat Simple_repeat 2 112 0 659 320 35 86 chr5 111310685 111311001 -91774531 - MLT1K LTR MaLR -1 587 303 805 74 16 0 chr5 111311001 111311123 -91774409 + (GA)n Simple_repeat Simple_repeat 1 124 0 659 320 35 86 chr5 111311123 111311296 -91774236 - MLT1K LTR MaLR -285 303 123 4212 181 57 42 chr5 111311965 111312949 -91772583 - L1MA6 LINE L1 -6 6294 5326 234 0 0 0 chr5 111312949 111312975 -91772557 + (ATG)n Simple_repeat Simple_repeat 3 28 0 2176 116 3 7 chr5 111312985 111313286 -91772246 - AluSq SINE Alu -13 300 1 4212 181 57 42 chr5 111313286 111313314 -91772218 - L1MA6 LINE L1 -982 5318 5254 3561 214 54 8 chr5 111313307 111314299 -91771233 - L1MA6 LINE L1 -2115 4031 2994 * 28777 38 19 7 chr5 111314480 111318333 -91767199 + L1P1 LINE L1 1631 5520 -635 1698 148 52 24 chr5 111371187 111371478 -91714054 - AluJo SINE Alu -13 299 1 2439 72 0 7 chr5 111371529 111371833 -91713699 + AluY SINE Alu 1 302 -9 615 253 13 7 chr5 111371956 111372110 -91713422 - MIR SINE MIR -105 157 3 449 161 183 0 chr5 111372111 111372204 -91713328 - Tigger4(Zombi) DNA MER2_type 0 2731 2622 1052 149 0 0 chr5 111372209 111372370 -91713162 + AluSg/x SINE Alu 138 298 -12 537 130 11 11 chr5 111372370 111372462 -91713070 - Tigger4(Zombi) DNA MER2_type -95 2636 2545 949 208 0 0 chr5 111372462 111372621 -91712911 - AluJb SINE Alu -20 292 134 1135 216 65 85 chr5 111372670 111373119 -91712413 - MER21B LTR ERV1 -125 738 299 1583 203 10 0 chr5 111374169 111374465 -91711067 + AluJo SINE Alu 1 299 -13 228 35 0 0 chr5 111374652 111374681 -91710851 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 24 53 0 0 chr5 111375309 111375347 -91710185 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 111375515 111375537 -91709995 + AT_rich Low_complexity Low_complexity 1 22 0 282 289 33 0 chr5 111376201 111376353 -91709179 + (TA)n Simple_repeat Simple_repeat 1 157 0 297 0 0 0 chr5 111376353 111376386 -91709146 + (CA)n Simple_repeat Simple_repeat 2 34 0 477 267 19 6 chr5 111376407 111376568 -91708964 + L1ME2 LINE L1 5089 5251 -895 284 174 58 29 chr5 111376570 111376639 -91708893 - MADE1 DNA Mariner 0 80 10 488 227 21 19 chr5 111376647 111376887 -91708645 + L1ME2 LINE L1 5255 5549 -615 273 29 0 0 chr5 111376889 111376923 -91708609 + (CA)n Simple_repeat Simple_repeat 2 35 0 910 259 98 42 chr5 111376930 111377432 -91708100 + L1ME2 LINE L1 5618 6147 -17 315 23 23 0 chr5 111377460 111377503 -91708029 + L1P LINE L1 3669 3712 -2434 2881 32 3 0 chr5 111377506 111377846 -91707686 + L1P LINE L1 3981 4321 -1825 2357 46 0 0 chr5 111378928 111379239 -91706293 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 111380322 111380343 -91705189 + AT_rich Low_complexity Low_complexity 1 21 0 318 257 40 20 chr5 111380706 111380807 -91704725 + L2 LINE L2 3168 3270 -2 213 360 82 50 chr5 111380956 111381273 -91704259 + L2 LINE L2 155 481 -2833 343 338 121 38 chr5 111381473 111381819 -91703713 + L2 LINE L2 517 891 -2423 226 196 59 0 chr5 111382061 111382112 -91703420 - MIR SINE MIR -90 172 119 271 258 0 0 chr5 111382248 111382310 -91703222 + Charlie5 DNA MER1_type 1 62 -2550 617 288 49 56 chr5 111382346 111382652 -91702880 - HERV16 LTR ERVL -4432 564 261 237 248 153 58 chr5 111382841 111382978 -91702554 - LTR16A LTR ERVL 0 450 301 1033 364 37 23 chr5 111383183 111383573 -91701959 + ERVL LTR ERVL 3121 3527 -2237 1391 252 37 3 chr5 111383573 111383922 -91701610 - MLT1A1 LTR MaLR -4 361 1 1033 364 37 23 chr5 111383922 111384239 -91701293 + ERVL LTR ERVL 3527 3838 -1926 1731 340 74 23 chr5 111384406 111384855 -91700677 + ERVL LTR ERVL 4055 4480 -1284 192 40 0 0 chr5 111384855 111384880 -91700652 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1731 340 74 23 chr5 111384880 111385599 -91699933 + ERVL LTR ERVL 4480 5282 -482 27 29 0 0 chr5 111385832 111385866 -91699666 + AT_rich Low_complexity Low_complexity 1 34 0 278 342 25 0 chr5 111387120 111387199 -91698333 + MIR SINE MIR 5 85 -177 4612 191 26 14 chr5 111387687 111387755 -91697777 - L1MA8 LINE L1 -2 6289 6223 1520 196 77 12 chr5 111387755 111388082 -91697450 - MER7A DNA MER2_type 0 346 1 4612 191 26 14 chr5 111388082 111389788 -91695744 - L1MA8 LINE L1 -68 6223 4501 2003 97 0 48 chr5 111389981 111390299 -91695233 + AluSx SINE Alu 11 314 0 6268 201 40 54 chr5 111391252 111393032 -91692500 + L1MC3 LINE L1 4985 5288 -858 2309 131 28 17 chr5 111393032 111393392 -91692140 + THE1B LTR MaLR 1 364 0 6268 201 40 54 chr5 111393392 111393507 -91692025 + L1MC3 LINE L1 5288 5403 -743 1729 194 27 5 chr5 111393515 111393916 -91691616 + L1MC3 LINE L1 7355 7764 -21 1520 163 68 7 chr5 111396721 111397016 -91688516 - AluSq SINE Alu 0 313 1 1583 211 7 60 chr5 111398477 111398895 -91686637 + L1MC2 LINE L1 5821 6216 -128 23 68 0 0 chr5 111399221 111399265 -91686267 + AT_rich Low_complexity Low_complexity 1 44 0 439 184 64 18 chr5 111399351 111399460 -91686072 + FRAM SINE Alu 1 40 0 376 159 0 14 chr5 111399460 111399529 -91686003 - LTR33A LTR ERVL -28 495 428 8916 205 40 81 chr5 111399543 111404638 -91680894 + L1M1 LINE L1 15 5591 -1974 789 103 8 0 chr5 111404638 111404755 -91680777 - MSTA LTR MaLR -310 118 1 180 0 0 0 chr5 111404775 111404795 -91680737 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1995 273 32 19 chr5 111404811 111405643 -91679889 + L1MD1 LINE L1 3190 4032 -2114 2570 208 77 30 chr5 111405645 111406334 -91679198 + L1MD1 LINE L1 5235 5959 -283 1184 196 26 107 chr5 111406346 111406765 -91678767 - LTR5 LTR ERVK -14 955 571 7499 27 4 1 chr5 111406765 111408420 -91677112 + L1PA4 LINE L1 4489 6155 0 2676 179 28 9 chr5 111408425 111408967 -91676565 - LTR5 LTR ERVK -417 552 1 1123 209 25 0 chr5 111408970 111409248 -91676284 + L1MD1 LINE L1 5958 6242 0 1663 246 132 35 chr5 111409612 111410210 -91675322 + MLT2F LTR ERVL 8 663 0 2395 172 71 23 chr5 111410224 111410742 -91674790 - MER67A LTR ERV1 0 543 1 207 264 38 0 chr5 111412249 111412302 -91673230 - L2 LINE L2 -84 3229 3175 241 288 82 0 chr5 111412564 111412637 -91672895 - MER5A DNA MER1_type -80 109 31 28 71 0 0 chr5 111412676 111412732 -91672800 + AT_rich Low_complexity Low_complexity 1 56 0 7831 118 43 22 chr5 111412802 111414407 -91671125 - HERVH LTR ERV1 -5967 1746 354 33 25 0 0 chr5 111416288 111416328 -91669204 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5 111417356 111417381 -91668151 + AT_rich Low_complexity Low_complexity 1 25 0 250 348 43 22 chr5 111417567 111417705 -91667827 + MIR SINE MIR 64 204 -58 14483 29 0 0 chr5 111418073 111420571 -91664961 + L1PA3 LINE L1 3659 6155 0 1394 179 58 69 chr5 111422380 111422759 -91662773 - THE1C LTR MaLR 0 375 1 7445 141 33 7 chr5 111422759 111424083 -91661449 - THE1C-int LTR MaLR 0 1645 182 1449 235 132 51 chr5 111424084 111424751 -91660781 + MER50 LTR ERV1 14 734 0 1080 124 16 16 chr5 111424756 111424942 -91660590 - THE1C-int LTR MaLR -1394 186 1 1541 166 63 74 chr5 111424942 111425321 -91660211 - THE1C LTR MaLR 0 375 1 891 148 43 19 chr5 111425401 111425563 -91659969 + THE1C LTR MaLR 1 166 -209 4664 237 76 23 chr5 111425565 111426940 -91658592 + L1P LINE L1 1667 3113 -3033 771 238 146 0 chr5 111427126 111427311 -91658221 - MLT1F1 LTR MaLR -351 216 5 739 272 51 78 chr5 111427339 111427851 -91657681 - L1MC5 LINE L1 -852 7109 6636 285 145 0 65 chr5 111428035 111428097 -91657435 + MADE1 DNA Mariner 23 80 0 2212 107 0 3 chr5 111428736 111429035 -91656497 - AluSg SINE Alu -12 298 1 1664 146 25 97 chr5 111429227 111429396 -91656136 - MSTB1 LTR MaLR -13 419 288 6910 64 2 2 chr5 111429396 111430350 -91655182 + L1PA7 LINE L1 5193 6146 -8 1664 146 25 97 chr5 111430350 111430542 -91654990 - MSTB1 LTR MaLR -144 288 84 426 314 73 25 chr5 111430550 111430824 -91654708 - L1MC5 LINE L1 -2226 5582 5296 21 36 0 0 chr5 111430952 111430980 -91654552 + AT_rich Low_complexity Low_complexity 1 28 0 365 287 83 82 chr5 111431153 111431752 -91653780 - L1MC5 LINE L1 -1299 4847 4248 272 376 6 0 chr5 111431771 111431928 -91653604 - L1P LINE L1 -1941 4205 4048 1839 43 47 20 chr5 111431956 111432211 -91653321 + AluY SINE Alu 1 262 -49 22 0 0 0 chr5 111432297 111432319 -91653213 + AT_rich Low_complexity Low_complexity 1 22 0 429 36 0 0 chr5 111433678 111433733 -91651799 + (TG)n Simple_repeat Simple_repeat 2 56 0 341 303 87 41 chr5 111433947 111434142 -91651390 + MIR SINE MIR 30 233 -29 22 56 0 0 chr5 111435283 111435319 -91650213 + AT_rich Low_complexity Low_complexity 1 36 0 545 179 0 110 chr5 111437351 111437548 -91647984 + MER51A LTR ERV1 453 637 -3 294 164 98 0 chr5 111437552 111437613 -91647919 + MER51A-int LTR ERV1 2 68 -7748 359 227 0 13 chr5 111437844 111437919 -91647613 + MER51A-int LTR ERV1 708 781 -7035 277 316 0 0 chr5 111438319 111438414 -91647118 + HUERS-P3 LTR ERV1 2106 2200 -6719 307 278 38 81 chr5 111438614 111438934 -91646598 + HUERS-P3 LTR ERV1 2082 2387 -5369 520 322 67 33 chr5 111439684 111440068 -91645464 + HUERS-P3 LTR ERV1 2900 3152 -3502 200 328 0 30 chr5 111440675 111440742 -91644790 + MER5A DNA MER1_type 104 168 -21 416 315 22 17 chr5 111441348 111441526 -91644006 - LTR16A1 LTR ERVL -4 453 275 416 258 24 16 chr5 111441571 111441695 -91643837 - LTR16A1 LTR ERVL -332 125 1 2243 205 60 21 chr5 111441822 111442402 -91643130 - L1MA10 LINE L1 -360 5952 5350 1443 203 51 17 chr5 111442399 111442589 -91642943 + L1MA10 LINE L1 5967 6149 -185 * 189 0 0 0 chr5 111442589 111442610 -91642922 + (CA)n Simple_repeat Simple_repeat 2 22 0 1443 203 51 17 chr5 111442610 111442773 -91642759 + L1MA10 LINE L1 6149 6332 -2 204 182 0 45 chr5 111442793 111442837 -91642695 + GA-rich Low_complexity Low_complexity 2 43 0 2693 7 0 0 chr5 111443520 111443815 -91641717 + AluYa5 SINE Alu 17 311 0 999 275 13 9 chr5 111444250 111444483 -91641049 + Tigger5 DNA MER2_type 6 239 -2084 * 1174 154 47 17 chr5 111444473 111444707 -91640825 + Tigger5 DNA MER2_type 2083 2323 0 1160 281 64 11 chr5 111445108 111445578 -91639954 - L1M4 LINE L1 -2012 4134 3640 25521 31 1 0 chr5 111445596 111449458 -91636074 - L1PA4 LINE L1 -3 6152 2289 39650 37 1 2 chr5 111449581 111454992 -91630540 - L1PA4 LINE L1 -230 5925 519 2582 185 38 6 chr5 111455225 111456047 -91629485 - L1M1 LINE L1 -505 7219 6364 * 4601 198 39 28 chr5 111456044 111457105 -91628427 - L1M1 LINE L1 -4570 2995 1924 250 105 0 0 chr5 111457458 111457496 -91628036 + L1MA1 LINE L1 6177 6214 -88 207 175 0 0 chr5 111457593 111457650 -91627882 + (TA)n Simple_repeat Simple_repeat 1 57 0 21 0 0 0 chr5 111458934 111458955 -91626577 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 111459188 111459210 -91626322 + AT_rich Low_complexity Low_complexity 1 22 0 191 0 103 0 chr5 111460361 111460390 -91625142 + (CATAA)n Simple_repeat Simple_repeat 2 33 0 203 200 0 33 chr5 111461553 111461613 -91623919 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 490 176 17 17 chr5 111461710 111461829 -91623703 + (CATATA)n Simple_repeat Simple_repeat 2 120 0 21 0 0 0 chr5 111462272 111462293 -91623239 + AT_rich Low_complexity Low_complexity 1 21 0 1391 0 0 0 chr5 111462293 111462448 -91623084 - L1PA5 LINE L1 -11 6143 5989 21 0 0 0 chr5 111464186 111464207 -91621325 + AT_rich Low_complexity Low_complexity 1 21 0 1996 243 75 77 chr5 111464345 111464480 -91621052 + L1MD3 LINE L1 6360 6494 -1501 1988 147 50 17 chr5 111464480 111464841 -91620691 - THE1C LTR MaLR 0 375 3 1996 243 75 77 chr5 111464841 111465602 -91619930 + L1MD3 LINE L1 6494 7254 -741 405 281 25 0 chr5 111465611 111465732 -91619800 + MLT1F1 LTR MaLR 1 124 -443 759 269 42 4 chr5 111465732 111465970 -91619562 + L1MD3 LINE L1 7404 7650 -345 642 255 69 27 chr5 111466719 111466907 -91618625 - MER3 DNA MER1_type -4 205 10 1815 225 39 86 chr5 111467212 111467758 -91617774 + MLT2B1 LTR ERVL 1 520 0 1071 245 77 25 chr5 111467758 111468313 -91617219 + ERVL-B1-B1 LTR ERVL 1 631 -5133 918 170 0 26 chr5 111468325 111468478 -91617054 - FRAM SINE Alu -19 157 9 733 298 31 9 chr5 111468489 111468714 -91616818 + ERVL-B1-B1 LTR ERVL 649 878 -4886 * 6851 189 22 26 chr5 111468711 111470036 -91615496 + ERVL-B1-B1 LTR ERVL 1526 2845 -2919 7509 191 24 6 chr5 111470143 111471518 -91614014 + ERVL-B1-B1 LTR ERVL 3044 4443 -1321 1073 146 0 0 chr5 111471518 111471669 -91613863 + AluSq SINE Alu 139 289 -24 1149 173 7 88 chr5 111471671 111471954 -91613578 + ERVL-B1-B1 LTR ERVL 5499 5758 -6 2241 194 82 25 chr5 111471955 111472396 -91613136 + MLT2B1 LTR ERVL 3 476 -44 423 0 0 0 chr5 111472396 111472443 -91613089 + (CA)n Simple_repeat Simple_repeat 2 48 0 2241 194 82 25 chr5 111472443 111472491 -91613041 + MLT2B1 LTR ERVL 476 520 0 27 49 0 0 chr5 111472950 111472991 -91612541 + AT_rich Low_complexity Low_complexity 1 41 0 919 195 0 96 chr5 111473124 111473461 -91612071 - MLT1C LTR MaLR 0 467 2 1681 69 0 5 chr5 111473468 111473685 -91611847 - AluY SINE Alu -17 294 79 20333 28 0 0 chr5 111473785 111476998 -91608534 + L1PA2 LINE L1 2941 6153 -2 1573 292 22 22 chr5 111477164 111477664 -91607868 + MLT1B-int LTR MaLR 1236 1735 0 950 269 54 54 chr5 111477664 111478054 -91607478 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr5 111478730 111478752 -91606780 + AT_rich Low_complexity Low_complexity 1 22 0 637 63 21 0 chr5 111479657 111479752 -91605780 + (TA)n Simple_repeat Simple_repeat 1 97 0 1643 109 0 0 chr5 111479897 111480126 -91605406 + AluSx SINE Alu 1 229 -83 233 226 0 19 chr5 111481222 111481275 -91604257 - L2 LINE L2 0 3313 3262 3650 199 116 52 chr5 111483289 111485204 -91600328 + L1MCa LINE L1 1 2169 -4395 685 226 16 73 chr5 111485200 111485448 -91600084 - L1MCa LINE L1 -5131 1295 1062 * 24 0 0 0 chr5 111485448 111485472 -91600060 + AT_rich Low_complexity Low_complexity 1 24 0 289 217 0 0 chr5 111485493 111485553 -91599979 + L1 LINE L1 4522 4581 -1565 1547 204 16 13 chr5 111485587 111485965 -91599567 + L1MCa LINE L1 2188 2566 -3998 5201 138 7 45 chr5 111485965 111487044 -91598488 - L1PB3 LINE L1 0 6154 5117 1650 241 79 104 chr5 111487051 111488000 -91597532 + L1MB5 LINE L1 4384 5308 -838 781 129 79 0 chr5 111487994 111488134 -91597398 - L1MA1 LINE L1 -220 6082 5932 * 898 113 53 7 chr5 111488108 111488258 -91597274 + L1MA1 LINE L1 6145 6301 -1 * 1155 198 88 24 chr5 111488246 111488574 -91596958 + L1MB5 LINE L1 5270 5618 -715 243 215 0 0 chr5 111488594 111488659 -91596873 + (TA)n Simple_repeat Simple_repeat 1 65 0 471 101 0 0 chr5 111488661 111488740 -91596792 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 1585 221 25 19 chr5 111488742 111489109 -91596423 - MLT2D LTR ERVL -45 369 1 1452 221 13 8 chr5 111489110 111489485 -91596047 + L1MB5 LINE L1 5789 6165 -9 1585 254 40 69 chr5 111489495 111490425 -91595107 - L1ME2 LINE L1 -20 6144 5239 24 77 0 0 chr5 111490448 111490500 -91595032 + AT_rich Low_complexity Low_complexity 1 52 0 2485 49 0 0 chr5 111490515 111490822 -91594710 - AluY SINE Alu -4 307 1 1130 81 0 6 chr5 111490962 111491122 -91594410 - L1MA2 LINE L1 -2 6302 6144 275 183 17 0 chr5 111491122 111491182 -91594350 + L1MA2 LINE L1 6047 6107 -197 557 261 116 5 chr5 111491250 111491465 -91594067 - L1ME2 LINE L1 -1177 4969 4731 23 0 0 0 chr5 111491639 111491662 -91593870 + AT_rich Low_complexity Low_complexity 1 23 0 704 334 58 3 chr5 111491943 111492286 -91593246 + MLT1G3 LTR MaLR 1 336 -194 409 301 44 0 chr5 111492307 111492443 -91593089 + MLT1G3 LTR MaLR 454 595 0 333 296 10 0 chr5 111492705 111492803 -91592729 + MLT1-int LTR MaLR 423 521 -850 373 317 96 12 chr5 111493145 111493312 -91592220 + MLT1-int LTR MaLR 692 872 -499 229 305 67 81 chr5 111493675 111493885 -91591647 + MLT1-int LTR MaLR 1141 1347 -24 233 29 29 0 chr5 111493960 111493994 -91591538 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1885 110 42 0 chr5 111494012 111494276 -91591256 - AluSx SINE Alu -37 275 1 2011 109 10 32 chr5 111494423 111494735 -91590797 - AluSx SINE Alu -7 305 1 381 289 16 25 chr5 111494735 111494856 -91590676 + MLT1G3 LTR MaLR 180 299 -231 201 39 0 0 chr5 111495066 111495092 -91590440 + (T)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr5 111497142 111497169 -91588363 + (CA)n Simple_repeat Simple_repeat 2 28 0 477 122 0 0 chr5 111497254 111497328 -91588204 - L1MC1 LINE L1 -6 6327 6254 280 272 0 22 chr5 111497331 111497423 -91588109 + L1MC4 LINE L1 6614 6703 -1339 264 304 0 0 chr5 111497393 111497485 -91588047 - L1MC4 LINE L1 -1337 6705 6614 * 278 177 53 106 chr5 111497477 111497590 -91587942 + L1MC4 LINE L1 6614 6720 -1322 2068 159 3 9 chr5 111497591 111497925 -91587607 + THE1B LTR MaLR 1 332 -32 328 270 0 22 chr5 111497931 111498020 -91587512 + L1MC4 LINE L1 6614 6700 -1342 195 184 0 0 chr5 111498024 111498062 -91587470 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 403 447 0 0 chr5 111498062 111498223 -91587309 + (CACG)n Simple_repeat Simple_repeat 1 161 0 241 279 63 0 chr5 111498226 111498305 -91587227 + L1MC4 LINE L1 6615 6698 -1344 241 313 24 0 chr5 111498338 111498421 -91587111 + L1MC4 LINE L1 6614 6698 -1344 239 318 47 0 chr5 111498426 111498511 -91587021 + L1MC4 LINE L1 6614 6702 -1340 274 140 40 0 chr5 111498579 111498629 -91586903 - L1M2 LINE L1 -458 5833 5782 180 217 0 0 chr5 111498643 111498689 -91586843 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 1695 171 64 3 chr5 111498698 111499044 -91586488 + L1PB4 LINE L1 5789 6155 -1 275 310 7 7 chr5 111499063 111499208 -91586324 + (CATATA)n Simple_repeat Simple_repeat 2 146 0 232 202 20 91 chr5 111499928 111500027 -91585505 + L1MC4 LINE L1 6615 6706 -1336 201 250 0 0 chr5 111500075 111500135 -91585397 + A-rich Low_complexity Low_complexity 6 65 0 25 31 0 0 chr5 111501350 111501382 -91584150 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 111503031 111503052 -91582480 + AT_rich Low_complexity Low_complexity 1 21 0 267 173 0 0 chr5 111503500 111503552 -91581980 + GA-rich Low_complexity Low_complexity 4 55 0 21 0 0 0 chr5 111503810 111503831 -91581701 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 111504123 111504145 -91581387 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr5 111504464 111504487 -91581045 + (TG)n Simple_repeat Simple_repeat 2 24 0 926 206 40 0 chr5 111505171 111505394 -91580138 + L1MA7 LINE L1 6045 6276 -15 605 297 78 10 chr5 111505420 111505713 -91579819 + L1M4 LINE L1 3497 3809 -2337 407 309 79 44 chr5 111505785 111506037 -91579495 + L1ME3A LINE L1 2 262 -6280 262 171 13 13 chr5 111506213 111506289 -91579243 + (TA)n Simple_repeat Simple_repeat 2 77 0 206 128 26 0 chr5 111506317 111506356 -91579176 + (TG)n Simple_repeat Simple_repeat 2 41 0 2350 231 18 28 chr5 111506458 111507167 -91578365 + L1ME3A LINE L1 1438 2139 -4507 1864 258 42 60 chr5 111507185 111508132 -91577400 + L1ME3A LINE L1 3387 4316 -2328 5662 145 9 4 chr5 111508234 111509333 -91576199 + L1PB2 LINE L1 5048 6150 -1 1822 208 29 3 chr5 111509676 111510056 -91575476 - MLT1B LTR MaLR 0 390 1 5725 30 36 0 chr5 111510806 111511505 -91574027 - L1PA4 LINE L1 -153 6002 5279 5038 35 2 0 chr5 111511503 111512122 -91573410 + L1PA4 LINE L1 4662 5281 -865 * 222 136 0 23 chr5 111512130 111512174 -91573358 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 295 359 32 19 chr5 111512347 111512503 -91573029 - MIR SINE MIR -48 214 57 842 282 93 35 chr5 111512851 111513906 -91571626 + L1ME3A LINE L1 5279 6397 -271 312 256 85 23 chr5 111514022 111514198 -91571334 - L1M4 LINE L1 -1603 4543 4357 2103 108 4 0 chr5 111514318 111514642 -91570890 - AluSq SINE Alu 0 313 17 511 331 96 21 chr5 111514685 111515060 -91570472 - L1M4 LINE L1 -2044 4102 3700 28 48 0 0 chr5 111515324 111515366 -91570166 + AT_rich Low_complexity Low_complexity 1 42 0 562 255 65 44 chr5 111515385 111515682 -91569850 - L1ME2 LINE L1 -44 6120 5816 571 282 162 5 chr5 111515684 111516411 -91569121 - L1ME2 LINE L1 -757 5389 4909 609 144 58 10 chr5 111516521 111516625 -91568907 - MER2 DNA MER2_type -236 109 1 574 215 155 62 chr5 111517412 111517748 -91567784 + L1ME LINE L1 5272 5631 -531 545 320 10 35 chr5 111517759 111517959 -91567573 - MER63A DNA MER1_type -7 203 9 583 226 49 12 chr5 111517969 111518133 -91567399 + L1ME LINE L1 5623 5792 -374 351 166 36 22 chr5 111518184 111518323 -91567209 + (CATATA)n Simple_repeat Simple_repeat 2 142 0 370 258 21 0 chr5 111518323 111518416 -91567116 - L1MC4 LINE L1 -1341 6701 6607 21 0 0 0 chr5 111518629 111518650 -91566882 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 111518768 111518816 -91566716 + AT_rich Low_complexity Low_complexity 1 48 0 274 146 0 0 chr5 111519346 111519387 -91566145 - AluY SINE Alu -56 245 205 214 356 14 0 chr5 111520613 111520686 -91564846 - L2 LINE L2 -39 3274 3201 1359 138 0 5 chr5 111522528 111522745 -91562787 + L1PA13 LINE L1 5651 5866 -297 2579 161 2 0 chr5 111522745 111523185 -91562347 + L1PA13 LINE L1 5721 6162 -1 323 194 56 28 chr5 111523884 111523992 -91561540 + L1MC3 LINE L1 4552 4662 -1484 393 147 32 0 chr5 111524886 111524981 -91560551 + (TA)n Simple_repeat Simple_repeat 2 99 0 189 0 0 0 chr5 111524980 111525001 -91560531 + (T)n Simple_repeat Simple_repeat 1 21 0 * 2059 114 7 10 chr5 111526568 111526874 -91558658 + AluSc SINE Alu 1 305 -4 21 57 0 0 chr5 111527300 111527335 -91558197 + AT_rich Low_complexity Low_complexity 1 35 0 1914 158 72 28 chr5 111527883 111528314 -91557218 + LTR7 LTR ERV1 1 450 0 2004 129 29 58 chr5 111528342 111528721 -91556811 + THE1C LTR MaLR 1 368 -7 464 294 73 24 chr5 111528726 111529015 -91556517 + L1M4 LINE L1 2883 3185 -2961 308 314 59 64 chr5 111529053 111529273 -91556259 + L1M4 LINE L1 3409 3627 -2519 21 0 0 0 chr5 111529603 111529624 -91555908 + AT_rich Low_complexity Low_complexity 1 21 0 1927 130 32 49 chr5 111530345 111530715 -91554817 + THE1B LTR MaLR 1 364 0 11258 99 8 1 chr5 111530717 111532284 -91553248 + THE1B-int LTR MaLR 3 1580 0 1315 154 15 121 chr5 111532284 111532568 -91552964 + THE1A LTR MaLR 1 233 -122 1599 104 13 9 chr5 111532568 111532799 -91552733 + AluSg/x SINE Alu 79 310 0 1315 154 15 121 chr5 111532799 111532911 -91552621 + THE1A LTR MaLR 233 355 0 524 238 108 108 chr5 111533829 111533940 -91551592 + L1MC3 LINE L1 5332 5442 -800 1774 164 67 25 chr5 111533940 111534300 -91551232 + THE1C LTR MaLR 1 375 0 8811 149 8 48 chr5 111534303 111535945 -91549587 + THE1C-int LTR MaLR 4 1580 0 1619 149 77 44 chr5 111535945 111536308 -91549224 + THE1C LTR MaLR 1 375 0 524 238 108 108 chr5 111536308 111537025 -91548507 + L1MC3 LINE L1 5442 6079 -163 23 0 0 0 chr5 111537075 111537098 -91548434 + AT_rich Low_complexity Low_complexity 1 23 0 873 305 17 51 chr5 111537186 111537537 -91547995 + L1M3 LINE L1 421 759 -5544 1063 154 0 0 chr5 111537652 111537821 -91547711 + AluSq SINE Alu 145 313 0 273 196 18 0 chr5 111537824 111537880 -91547652 + L1M4 LINE L1 3037 3093 -3053 * 37669 91 8 7 chr5 111537874 111544025 -91541507 + L1PA6 LINE L1 2 6154 0 713 239 29 55 chr5 111544020 111544363 -91541169 + L1M4 LINE L1 3073 3406 -2740 * 220 379 11 0 chr5 111544366 111544453 -91541079 + MIR SINE MIR 64 151 -57 4895 186 7 3 chr5 111544756 111545706 -91539826 - L1P LINE L1 -1178 4968 4015 2689 234 6 8 chr5 111545702 111546363 -91539169 + L1P LINE L1 2228 2887 -3259 * 4011 267 91 37 chr5 111546901 111546988 -91538544 + L1M3 LINE L1 811 892 -5490 181 57 57 0 chr5 111546988 111547023 -91538509 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4011 267 91 37 chr5 111547023 111548074 -91537458 + L1M3 LINE L1 892 1885 -4497 29 78 0 0 chr5 111548074 111548138 -91537394 + AT_rich Low_complexity Low_complexity 1 64 0 4011 267 91 37 chr5 111548138 111548208 -91537324 + L1M3 LINE L1 1885 1950 -4432 1666 182 63 122 chr5 111548208 111548797 -91536735 + MLT2B3 LTR ERVL 1 554 0 4011 267 91 37 chr5 111548797 111549382 -91536150 + L1M3 LINE L1 1950 2502 -3880 237 33 0 0 chr5 111549382 111549412 -91536120 + (TG)n Simple_repeat Simple_repeat 2 31 0 4011 267 91 37 chr5 111549412 111551209 -91534323 + L1M3 LINE L1 2502 4600 -1782 1066 170 5 18 chr5 111551204 111551422 -91534110 + L1M3 LINE L1 5589 5803 -767 * 292 200 158 21 chr5 111551812 111551907 -91533625 - L1ME3 LINE L1 -1 6161 6054 331 237 49 41 chr5 111551926 111552116 -91533416 - L1P5 LINE L1 -700 5451 5254 1537 229 3 3 chr5 111552559 111552864 -91532668 - MLT1A1 LTR MaLR 0 365 61 296 392 90 14 chr5 111552901 111553245 -91532287 - L3 LINE CR1 -119 1458 1089 217 339 76 8 chr5 111553570 111553688 -91531844 - L3 LINE CR1 -201 1376 1251 24 0 0 0 chr5 111553846 111553870 -91531662 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr5 111554455 111554490 -91531042 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 111555735 111555766 -91529766 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr5 111556296 111556337 -91529195 + AT_rich Low_complexity Low_complexity 1 41 0 957 185 6 0 chr5 111556338 111556495 -91529037 - FRAM SINE Alu -8 158 1 27 49 0 0 chr5 111556756 111556797 -91528735 + AT_rich Low_complexity Low_complexity 1 41 0 1339 199 168 5 chr5 111557338 111557732 -91527800 - MLT2B1 LTR ERVL 0 515 3 209 238 0 0 chr5 111557913 111557955 -91527577 + T-rich Low_complexity Low_complexity 1 42 0 2193 118 0 10 chr5 111558371 111558677 -91526855 + AluSq SINE Alu 1 303 -10 1096 248 35 55 chr5 111558678 111559077 -91526455 - L1ME3A LINE L1 -20 6150 5760 631 144 0 8 chr5 111559076 111559194 -91526338 + L1PA10 LINE L1 5928 6044 -124 * 233 0 62 0 chr5 111559452 111559484 -91526048 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 217 87 87 0 chr5 111559599 111559645 -91525887 + T-rich Low_complexity Low_complexity 1 50 0 6702 229 27 25 chr5 111559757 111562049 -91523483 - L1 LINE L1 -2337 3809 1508 23 0 0 0 chr5 111562394 111562417 -91523115 + AT_rich Low_complexity Low_complexity 1 23 0 475 168 109 0 chr5 111562439 111562540 -91522992 - L1MA9 LINE L1 -38 6274 6163 2071 196 45 42 chr5 111562550 111563955 -91521577 - L1MA7 LINE L1 -6 6285 4812 534 330 73 42 chr5 111563981 111564933 -91520599 + L1ME2 LINE L1 3670 4651 -1495 353 325 31 35 chr5 111564953 111565242 -91520290 + L1ME2 LINE L1 4735 5022 -1124 22 80 0 0 chr5 111565837 111565887 -91519645 + AT_rich Low_complexity Low_complexity 1 50 0 668 250 191 72 chr5 111566126 111566292 -91519240 + L1ME2 LINE L1 5468 5613 -551 234 0 0 0 chr5 111566292 111566318 -91519214 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 668 250 191 72 chr5 111566318 111566534 -91518998 + L1ME2 LINE L1 5613 5802 -362 2068 100 27 20 chr5 111566534 111566834 -91518698 + AluSx SINE Alu 1 302 -10 668 250 191 72 chr5 111566834 111567073 -91518459 + L1ME2 LINE L1 5802 6164 0 351 260 123 84 chr5 111567928 111568049 -91517483 + MER5B DNA MER1_type 4 134 -44 1281 206 57 7 chr5 111568049 111568330 -91517202 + AluJo SINE Alu 4 298 -4 351 260 123 84 chr5 111568330 111568362 -91517170 + MER5B DNA MER1_type 134 163 -15 348 24 0 0 chr5 111569805 111569846 -91515686 + (TG)n Simple_repeat Simple_repeat 2 42 0 2472 221 60 11 chr5 111570077 111570773 -91514759 - Charlie5 DNA MER1_type -516 2096 1367 1118 222 90 21 chr5 111571048 111571382 -91514150 + MER67C LTR ERV1 24 380 -330 859 220 19 14 chr5 111571389 111571598 -91513934 + MER67C LTR ERV1 499 708 -2 1787 158 49 25 chr5 111573035 111573401 -91512131 - THE1C LTR MaLR 0 375 1 1788 115 0 0 chr5 111574350 111574594 -91510938 + AluSx SINE Alu 1 244 -68 3803 178 11 27 chr5 111574690 111575625 -91509907 + L1PB4 LINE L1 5081 6003 -153 5730 185 23 8 chr5 111575730 111576853 -91508679 - L1PBb LINE L1 -5058 1146 7 2602 239 2 18 chr5 111576823 111577425 -91508107 - L1PBa LINE L1 -5223 981 390 * 13535 174 28 1 chr5 111577425 111580339 -91505193 - L1PA11 LINE L1 0 7612 4570 459 52 0 0 chr5 111580339 111580397 -91505135 + (TG)n Simple_repeat Simple_repeat 2 59 0 13535 174 28 1 chr5 111580397 111580824 -91504708 - L1PA11 LINE L1 -3042 4570 4156 6825 60 0 1 chr5 111580849 111582543 -91502989 - L1PA7 LINE L1 0 6154 4451 6711 239 9 17 chr5 111582543 111584315 -91501217 - L1PA11 LINE L1 -3423 4161 2404 204 40 0 0 chr5 111584317 111584342 -91501190 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3638 229 34 30 chr5 111584342 111585247 -91500285 - L1PA11 LINE L1 -6671 910 2 3163 264 46 22 chr5 111585250 111586286 -91499246 - L1PBa LINE L1 -5800 1063 3 9205 253 9 16 chr5 111586624 111588675 -91496857 + L1M2 LINE L1 2 1973 -4680 5203 209 26 42 chr5 111588803 111590153 -91495379 + L1M2 LINE L1 4596 5924 -808 1084 230 22 17 chr5 111590157 111590387 -91495145 + AluJb SINE Alu 11 241 -71 481 163 12 0 chr5 111590389 111590475 -91495057 + L1M2 LINE L1 5961 6047 -830 237 67 0 0 chr5 111590673 111590703 -91494829 + LTR6A LTR ERV1 73 102 -462 341 277 14 0 chr5 111590859 111590959 -91494573 + L1MC/D LINE L1 611 906 -5740 212 196 20 0 chr5 111591037 111591088 -91494444 + T-rich Low_complexity Low_complexity 3 54 0 859 223 39 59 chr5 111591097 111591402 -91494130 + L1MC/D LINE L1 817 1115 -5427 584 246 0 8 chr5 111591420 111591554 -91493978 + MLT1A1 LTR MaLR 1 133 -232 189 121 0 0 chr5 111591586 111591619 -91493913 + (TC)n Simple_repeat Simple_repeat 2 34 0 277 246 0 14 chr5 111591680 111591749 -91493783 + MLT1A1 LTR MaLR 186 253 -112 * 671 231 14 0 chr5 111591744 111591891 -91493641 + MLT1A1 LTR MaLR 215 363 -2 359 268 69 21 chr5 111591893 111592095 -91493437 + L1MC/D LINE L1 1150 1353 -5193 4962 204 8 8 chr5 111592195 111593249 -91492283 + L1P LINE L1 2965 4018 -2128 2045 138 0 3 chr5 111593500 111593797 -91491735 - AluSx SINE Alu -11 301 6 203 308 132 57 chr5 111594851 111595078 -91490454 - MIR SINE MIR -12 250 7 1824 159 128 13 chr5 111596240 111596624 -91488908 + MSTA LTR MaLR 1 428 0 8332 194 36 6 chr5 111596624 111598222 -91487310 + MSTA-int LTR MaLR 1 1645 -6 2360 152 54 5 chr5 111598228 111598636 -91486896 + MSTA LTR MaLR 1 428 0 27 73 0 0 chr5 111598821 111598876 -91486656 + AT_rich Low_complexity Low_complexity 1 55 0 1310 250 131 30 chr5 111600376 111600912 -91484620 - MER63C DNA MER1_type -178 752 163 42152 35 24 2 chr5 111600912 111606928 -91478604 + L1PA2 LINE L1 1 6150 -5 367 228 15 59 chr5 111606928 111607064 -91478468 - MER63C DNA MER1_type -754 176 47 617 296 69 37 chr5 111607130 111607940 -91477592 + L1MC/D LINE L1 2618 3453 -3191 636 326 76 25 chr5 111608322 111608718 -91476814 + L1PBa LINE L1 39 454 -6409 4447 250 51 44 chr5 111608782 111610602 -91474930 + L1 LINE L1 1865 3704 -2442 213 65 0 0 chr5 111610602 111610633 -91474899 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 4447 250 51 44 chr5 111610633 111610674 -91474858 + L1 LINE L1 3704 3743 -2403 2780 223 71 13 chr5 111610669 111611487 -91474045 + L1 LINE L1 4140 5004 -1142 * 1112 175 5 0 chr5 111611602 111611791 -91473741 + L1PB4 LINE L1 5961 6150 -6 304 291 51 79 chr5 111611849 111612103 -91473429 + L1MC/D LINE L1 3618 3864 -2780 31 26 0 0 chr5 111612252 111612290 -91473242 + AT_rich Low_complexity Low_complexity 1 38 0 38 22 0 0 chr5 111612363 111612408 -91473124 + AT_rich Low_complexity Low_complexity 1 45 0 868 295 107 45 chr5 111612457 111613662 -91471870 + L1MC/D LINE L1 4319 5598 -1046 204 217 50 0 chr5 111613780 111613840 -91471692 + (CATA)n Simple_repeat Simple_repeat 2 64 0 306 277 40 0 chr5 111613846 111613947 -91471585 + L1ME3A LINE L1 5587 5691 -479 271 288 141 47 chr5 111614095 111614414 -91471118 + L1ME3A LINE L1 5788 6136 -34 24 32 0 0 chr5 111616136 111616167 -91469365 + AT_rich Low_complexity Low_complexity 1 31 0 303 288 73 68 chr5 111616188 111616407 -91469125 + L1ME4a LINE L1 5716 5935 -186 24 0 0 0 chr5 111616524 111616548 -91468984 + AT_rich Low_complexity Low_complexity 1 24 0 36 62 0 0 chr5 111616700 111616764 -91468768 + AT_rich Low_complexity Low_complexity 1 64 0 22 70 0 0 chr5 111617002 111617045 -91468487 + AT_rich Low_complexity Low_complexity 1 43 0 304 329 62 33 chr5 111617111 111617448 -91468084 + L1MC/D LINE L1 5755 6101 -2205 25 31 0 0 chr5 111617450 111617482 -91468050 + AT_rich Low_complexity Low_complexity 1 32 0 3776 82 2 2 chr5 111617539 111618054 -91467478 - L1PA8 LINE L1 -6 6166 5652 1216 161 5 23 chr5 111618244 111618289 -91467243 + AluSg/x SINE Alu 93 137 -175 2190 114 3 0 chr5 111618289 111618588 -91466944 + AluSx SINE Alu 1 300 -12 1216 161 5 23 chr5 111618588 111618759 -91466773 + AluSg/x SINE Alu 137 305 -7 3123 186 29 5 chr5 111618760 111619423 -91466109 + L1PB4 LINE L1 5476 6154 -2 30 69 0 0 chr5 111620235 111620293 -91465239 + AT_rich Low_complexity Low_complexity 1 58 0 365 308 97 47 chr5 111620488 111621007 -91464525 - MLT1F LTR MaLR -7 588 22 2303 86 35 1 chr5 111622095 111622120 -91463412 + L1P4 LINE L1 5205 5228 -940 3520 112 2 13 chr5 111622120 111622658 -91462874 - L1PA13 LINE L1 -3 6160 5629 2303 86 35 1 chr5 111622658 111623025 -91462507 + L1PA13 LINE L1 5228 5610 -558 35 63 0 0 chr5 111623331 111623394 -91462138 + AT_rich Low_complexity Low_complexity 1 63 0 24 32 0 0 chr5 111623507 111623538 -91461994 + AT_rich Low_complexity Low_complexity 1 31 0 5629 22 0 0 chr5 111623545 111624480 -91461052 + L1P1 LINE L1 4723 5657 -498 525 161 76 0 chr5 111624867 111624985 -91460547 + L1MA9 LINE L1 6185 6311 -1 26 0 0 0 chr5 111625178 111625204 -91460328 + AT_rich Low_complexity Low_complexity 1 26 0 319 328 124 27 chr5 111625634 111625820 -91459712 - MLT1K LTR MaLR -196 392 189 314 286 36 18 chr5 111625867 111625979 -91459553 + L2 LINE L2 3199 3312 -1 184 244 128 35 chr5 111626867 111626953 -91458579 + MIR SINE MIR 59 152 -56 780 199 30 0 chr5 111627716 111627882 -91457650 + L1MA7 LINE L1 5804 5974 -338 2100 139 19 30 chr5 111627883 111628249 -91457283 + THE1B LTR MaLR 1 362 -2 10223 114 52 1 chr5 111628251 111629755 -91455777 + THE1B-int LTR MaLR 1 1580 0 2035 139 22 33 chr5 111629755 111630123 -91455409 + THE1B LTR MaLR 1 364 0 983 242 24 60 chr5 111630123 111630451 -91455081 + L1MA7 LINE L1 5969 6286 -5 378 326 71 5 chr5 111630859 111631055 -91454477 + MLT1H LTR MaLR 3 211 -338 366 195 26 0 chr5 111631246 111631323 -91454209 + MLT1H1 LTR MaLR 460 538 -17 27 73 0 0 chr5 111631462 111631517 -91454015 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 111633360 111633381 -91452151 + AT_rich Low_complexity Low_complexity 1 21 0 2248 139 34 0 chr5 111633678 111634030 -91451502 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr5 111634119 111634142 -91451390 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr5 111634411 111634456 -91451076 + AT_rich Low_complexity Low_complexity 1 45 0 409 337 90 64 chr5 111634666 111634888 -91450644 + L2 LINE L2 2085 2300 -1014 2043 161 0 23 chr5 111634888 111635241 -91450291 + MER7A DNA MER2_type 2 344 -2 409 337 90 64 chr5 111635241 111635641 -91449891 + L2 LINE L2 2300 2723 -591 734 290 58 71 chr5 111636060 111636154 -91449378 + MLT1A2 LTR MaLR 1 95 -279 2012 123 17 10 chr5 111636154 111636446 -91449086 + AluSx SINE Alu 1 294 -18 734 290 58 71 chr5 111636446 111636730 -91448802 + MLT1A2 LTR MaLR 95 374 0 2037 201 114 11 chr5 111636730 111637290 -91448242 + MLT1A2-int LTR MaLR 1 735 -636 2086 159 0 23 chr5 111637686 111638032 -91447500 - MER7A DNA MER2_type -9 337 2 211 262 16 0 chr5 111638080 111638141 -91447391 - L2 LINE L2 -1069 2245 2184 4834 34 2 4 chr5 111638172 111638785 -91446747 + L1PA15-16 LINE L1 2887 3495 -3354 2206 188 69 43 chr5 111638908 111639460 -91446072 + LTR1B LTR ERV1 261 826 0 614 322 91 45 chr5 111639732 111640805 -91444727 + L1MEc LINE L1 55 1232 -5164 2256 88 3 0 chr5 111640805 111641101 -91444431 + AluY SINE Alu 1 297 -14 614 322 91 45 chr5 111641101 111641695 -91443837 + L1MEc LINE L1 1232 1798 -4598 2617 93 58 21 chr5 111641696 111642128 -91443404 + LTR7 LTR ERV1 1 448 -2 2401 75 6 0 chr5 111642130 111642448 -91443084 + HERVH LTR ERV1 1 320 -7393 1396 92 0 0 chr5 111642600 111642795 -91442737 + HERVH LTR ERV1 3799 3993 -3720 2986 129 0 21 chr5 111642797 111643427 -91442105 + HERVH LTR ERV1 4488 5149 -2564 1297 122 23 14 chr5 111643424 111643645 -91441887 + HERVH LTR ERV1 5597 5819 -1894 * 2498 84 45 13 chr5 111643643 111644023 -91441509 + HERVH LTR ERV1 7322 7713 0 2621 93 58 21 chr5 111644023 111644455 -91441077 + LTR7 LTR ERV1 1 448 -2 3603 98 35 13 chr5 111644617 111644726 -91440806 + MER41A LTR ERV1 1 106 -448 6409 104 25 29 chr5 111644726 111645699 -91439833 + LTR5 LTR ERVK 1 969 0 3603 98 35 13 chr5 111645699 111646130 -91439402 + MER41A LTR ERV1 106 553 -1 367 232 72 55 chr5 111646135 111646316 -91439216 + L1MEc LINE L1 2046 2229 -4167 703 312 108 23 chr5 111646320 111646342 -91439190 + L1MEc LINE L1 212 231 -6332 3230 183 40 62 chr5 111646342 111647144 -91438388 - LTR1 LTR ERV1 -1 784 1 703 312 108 23 chr5 111647144 111647252 -91438280 + L1MEc LINE L1 231 328 -6235 216 67 0 0 chr5 111647252 111647282 -91438250 + (TG)n Simple_repeat Simple_repeat 2 31 0 703 312 108 23 chr5 111647282 111647538 -91437994 + L1MEc LINE L1 328 632 -5931 312 261 25 50 chr5 111647535 111647696 -91437836 + L1MEc LINE L1 1284 1440 -4944 * 1552 260 82 43 chr5 111647853 111648439 -91437093 + L1MEc LINE L1 1800 2361 -4021 1334 185 45 51 chr5 111648439 111648752 -91436780 + AluJb SINE Alu 2 312 0 1552 260 82 43 chr5 111648752 111649341 -91436191 + L1MEc LINE L1 2361 2925 -3457 2426 70 0 0 chr5 111649341 111649642 -91435890 + AluY SINE Alu 1 301 -10 1552 260 82 43 chr5 111649642 111650122 -91435410 + L1MEc LINE L1 2925 3385 -2997 7224 41 6 0 chr5 111650122 111651124 -91434408 + L1PA4 LINE L1 5147 6153 -2 1552 260 82 43 chr5 111651124 111651222 -91434310 + L1MEc LINE L1 3385 3478 -2904 1977 111 14 3 chr5 111651222 111651510 -91434022 - AluSq SINE Alu -14 299 9 1552 260 82 43 chr5 111651510 111651578 -91433954 + L1MEc LINE L1 3478 3658 -2724 468 264 31 6 chr5 111651969 111652132 -91433400 + L1MD3 LINE L1 7818 7984 -11 215 175 18 0 chr5 111652635 111652692 -91432840 + (CA)n Simple_repeat Simple_repeat 1 58 0 10784 173 23 51 chr5 111652829 111654570 -91430962 - L1 LINE L1 -1931 5634 3846 3256 113 2 0 chr5 111654570 111655022 -91430510 - MLT2A2 LTR ERVL 0 453 1 10784 173 23 51 chr5 111655022 111657361 -91428171 - L1 LINE L1 -3719 3846 1676 462 260 28 72 chr5 111657368 111657549 -91427983 - MLT1D LTR MaLR -309 196 24 413 66 16 0 chr5 111658382 111658443 -91427089 + (CA)n Simple_repeat Simple_repeat 2 63 0 192 40 0 0 chr5 111660415 111660440 -91425092 + (CCA)n Simple_repeat Simple_repeat 1 25 0 242 264 0 0 chr5 111660980 111661033 -91424499 + GA-rich Low_complexity Low_complexity 5 57 0 231 270 0 16 chr5 111661188 111661251 -91424281 + MIR3 SINE MIR 146 207 -1 202 268 28 0 chr5 111661688 111661759 -91423773 + (TA)n Simple_repeat Simple_repeat 1 73 0 251 337 71 0 chr5 111661776 111661874 -91423658 - L2 LINE L2 0 3272 3168 236 321 109 95 chr5 111661923 111662339 -91423193 + LTR33 LTR ERVL 39 428 -95 203 333 149 0 chr5 111662461 111662602 -91422930 - L2 LINE L2 -196 3076 2915 580 349 101 33 chr5 111662925 111663840 -91421692 - L2 LINE L2 -724 2590 1614 24 32 0 0 chr5 111663988 111664019 -91421513 + AT_rich Low_complexity Low_complexity 1 31 0 5265 185 36 24 chr5 111664023 111664135 -91421397 - L1MA8 LINE L1 -5 7705 7596 450 0 0 0 chr5 111664135 111664185 -91421347 + (TATAA)n Simple_repeat Simple_repeat 1 50 0 5265 185 36 24 chr5 111664185 111666091 -91419441 - L1MA8 LINE L1 -114 7596 5665 2706 208 11 0 chr5 111666086 111666659 -91418873 + L1 LINE L1 3270 3848 -2298 * 4416 181 65 1 chr5 111666660 111667598 -91417934 - L1MA8 LINE L1 -1900 5665 4668 3752 102 15 20 chr5 111667609 111668208 -91417324 - L1MA1 LINE L1 -6 6296 5701 6049 194 21 14 chr5 111668209 111670089 -91415443 - L1 LINE L1 -2516 5049 3150 * 10862 184 31 28 chr5 111670084 111670466 -91415066 - L1 LINE L1 -4958 2607 2228 2123 126 0 0 chr5 111670466 111670760 -91414772 - AluSx SINE Alu -11 301 8 10862 184 31 28 chr5 111670760 111672469 -91413063 - L1 LINE L1 -5337 2228 510 1147 95 28 22 chr5 111672487 111672666 -91412866 - MER30 DNA MER1_type -50 180 1 1001 231 43 5 chr5 111672666 111672874 -91412658 - L1 LINE L1 -7048 517 302 1766 223 15 93 chr5 111672875 111673607 -91411925 + L1M1 LINE L1 2686 3360 -4205 935 211 39 4 chr5 111673604 111673860 -91411672 - L1MA8 LINE L1 -4882 2683 2419 * 1543 138 64 51 chr5 111673861 111674172 -91411360 - THE1B LTR MaLR -49 315 1 560 125 67 58 chr5 111674172 111674278 -91411254 - L1MA5A LINE L1 -384 5913 5804 1643 194 0 3 chr5 111674278 111674562 -91410970 - AluJb SINE Alu -29 283 1 560 125 67 58 chr5 111674562 111674575 -91410957 - L1MA5A LINE L1 -493 5804 5793 * 1604 220 93 12 chr5 111674568 111674986 -91410546 - L1MA8 LINE L1 -5106 2459 2008 230 102 0 102 chr5 111675014 111675063 -91410469 + L1M3 LINE L1 5254 5297 -2745 2029 202 26 5 chr5 111675091 111675473 -91410059 + MSTB LTR MaLR 37 426 0 286 232 14 0 chr5 111675473 111675542 -91409990 + L1M3 LINE L1 5574 5643 -691 778 257 17 0 chr5 111675542 111675717 -91409815 + MSTD LTR MaLR 219 396 0 1431 251 63 0 chr5 111675721 111676115 -91409417 + L1ME1 LINE L1 5583 6001 -165 315 0 0 0 chr5 111676703 111676738 -91408794 + (TTG)n Simple_repeat Simple_repeat 2 36 0 954 103 0 0 chr5 111676749 111676875 -91408657 - AluSg/x SINE Alu -18 292 167 207 0 0 0 chr5 111677242 111677265 -91408267 + (A)n Simple_repeat Simple_repeat 1 23 0 517 334 52 29 chr5 111677404 111677748 -91407784 - LTR16A LTR ERVL -14 436 85 22 0 0 0 chr5 111678891 111678913 -91406619 + AT_rich Low_complexity Low_complexity 1 22 0 188 410 19 29 chr5 111680123 111680228 -91405304 - L2 LINE L2 -13 3259 3156 889 204 69 56 chr5 111680274 111680593 -91404939 + MER33 DNA MER1_type 2 324 0 351 306 75 29 chr5 111681398 111681571 -91403961 + MLT1H LTR MaLR 3 183 -366 229 133 50 0 chr5 111682055 111682115 -91403417 + GA-rich Low_complexity Low_complexity 2 64 0 245 202 61 10 chr5 111682122 111682221 -91403311 + (TA)n Simple_repeat Simple_repeat 2 105 0 2046 129 0 0 chr5 111682506 111682786 -91402746 + AluSg SINE Alu 7 286 -24 38 22 0 0 chr5 111682786 111682831 -91402701 + AT_rich Low_complexity Low_complexity 1 45 0 2048 108 7 7 chr5 111683088 111683384 -91402148 + AluSq SINE Alu 18 313 0 1661 126 112 7 chr5 111683632 111683910 -91401622 + AluSg SINE Alu 1 307 -3 347 261 23 34 chr5 111684876 111684965 -91400567 + (TATATG)n Simple_repeat Simple_repeat 2 90 -85 1810 165 54 12 chr5 111684965 111685298 -91400234 + MER7A DNA MER2_type 1 345 -1 347 261 23 34 chr5 111685298 111685384 -91400148 + (TATATG)n Simple_repeat Simple_repeat 90 175 0 22 0 0 0 chr5 111685648 111685670 -91399862 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr5 111685783 111685822 -91399710 + AT_rich Low_complexity Low_complexity 1 39 0 1918 104 62 24 chr5 111685961 111686249 -91399283 + AluSx SINE Alu 1 299 -13 573 272 89 50 chr5 111686263 111686825 -91398707 - L1MEc LINE L1 -5121 1275 692 229 242 0 76 chr5 111686842 111686908 -91398624 - MER58 DNA MER1_type -1 2419 2359 260 294 24 12 chr5 111686922 111687007 -91398525 - MER58 DNA MER1_type -2166 254 169 251 324 65 43 chr5 111687249 111687434 -91398098 - L1MEc LINE L1 -5919 477 289 22 56 0 0 chr5 111687946 111687982 -91397550 + AT_rich Low_complexity Low_complexity 1 36 0 809 247 69 86 chr5 111688438 111688849 -91396683 - MLT2C2 LTR ERVL 0 464 66 22 35 0 0 chr5 111689310 111689339 -91396193 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 111689377 111689415 -91396117 + AT_rich Low_complexity Low_complexity 1 38 0 2552 194 35 28 chr5 111689505 111690081 -91395451 - L1MA9 LINE L1 -841 5305 4726 4655 181 23 37 chr5 111690084 111691087 -91394445 + L1MA9 LINE L1 5324 6312 0 40245 73 4 2 chr5 111692513 111698659 -91386873 + L1PA5 LINE L1 2 6154 0 600 365 50 4 chr5 111698937 111699214 -91386318 + LTR16A LTR ERVL 150 439 -11 1014 321 48 47 chr5 111699243 111699885 -91385647 + HERV16 LTR ERVL 25 667 -4329 323 270 68 0 chr5 111700091 111700165 -91385367 - MER2 DNA MER2_type 0 345 267 1199 153 25 0 chr5 111700201 111700397 -91385135 - MER2 DNA MER2_type -144 201 1 485 407 26 3 chr5 111700737 111701042 -91384490 + HERV16 LTR ERVL 1238 1549 -3447 388 318 16 0 chr5 111701074 111701203 -91384329 + HERV16 LTR ERVL 1659 1789 -3207 365 340 32 27 chr5 111701460 111701645 -91383887 + MERVL LTR ERVL 3295 3480 -2005 983 319 31 17 chr5 111702040 111702394 -91383138 + LTR16A LTR ERVL 73 431 -19 1681 197 39 28 chr5 111702847 111703208 -91382324 - MLT1A1 LTR MaLR 0 365 1 13542 196 16 31 chr5 111703365 111706407 -91379125 + L1P5 LINE L1 1101 4286 -2581 221 0 35 0 chr5 111706407 111706436 -91379096 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 13542 196 16 31 chr5 111706436 111708616 -91376916 + L1P5 LINE L1 4286 6497 -370 2090 274 45 25 chr5 111708623 111709405 -91376127 + L1ME2 LINE L1 4268 5074 -1072 279 0 0 0 chr5 111709405 111709436 -91376096 + (CA)n Simple_repeat Simple_repeat 2 32 0 2090 274 45 25 chr5 111709436 111709618 -91375914 + L1ME2 LINE L1 5074 5251 -895 296 171 43 29 chr5 111709620 111709690 -91375842 - MADE1 DNA Mariner 0 80 10 488 227 21 19 chr5 111709698 111709938 -91375594 + L1ME2 LINE L1 5255 5549 -615 273 29 0 0 chr5 111709940 111709974 -91375558 + (CA)n Simple_repeat Simple_repeat 2 35 0 910 259 98 42 chr5 111709981 111710483 -91375049 + L1ME2 LINE L1 5618 6147 -17 372 42 0 0 chr5 111710511 111710559 -91374973 + L1PA5 LINE L1 3669 3716 -2430 10934 57 0 21 chr5 111710559 111712749 -91372783 + L1PA5 LINE L1 3981 6154 0 1897 108 0 79 chr5 111713076 111713381 -91372151 - AluSc SINE Alu -13 296 16 370 294 74 74 chr5 111714292 111714591 -91370941 + MLT1I LTR MaLR 79 377 -32 32 43 0 0 chr5 111714724 111714770 -91370762 + AT_rich Low_complexity Low_complexity 1 46 0 625 339 149 36 chr5 111714884 111715655 -91369877 + L2 LINE L2 374 1231 -2083 697 289 113 30 chr5 111715833 111716196 -91369336 + L2 LINE L2 2921 3313 0 2288 78 0 0 chr5 111716509 111716829 -91368703 + AluY SINE Alu 1 320 0 1881 187 20 28 chr5 111719361 111719756 -91365776 + MLT2D LTR ERVL 9 400 -14 4902 197 33 39 chr5 111719818 111720117 -91365415 + L1MC1 LINE L1 4343 4642 -1691 2848 23 0 17 chr5 111720117 111720468 -91365064 + L1PA4 LINE L1 5808 6152 -3 4902 197 33 39 chr5 111720468 111722174 -91363358 + L1MC1 LINE L1 4642 6332 -1 267 122 0 0 chr5 111722964 111723013 -91362519 + (T)n Simple_repeat Simple_repeat 1 49 0 218 313 47 118 chr5 111723178 111723629 -91361903 + L2 LINE L2 2849 3267 -5 223 137 20 20 chr5 111724608 111724659 -91360873 + CT-rich Low_complexity Low_complexity 3 53 0 278 113 0 38 chr5 111725259 111725312 -91360220 + (TATG)n Simple_repeat Simple_repeat 4 54 0 185 0 40 0 chr5 111727961 111727986 -91357546 + (CCCCCA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr5 111729525 111729548 -91355984 + AT_rich Low_complexity Low_complexity 1 23 0 573 159 0 0 chr5 111730449 111730537 -91354995 - FLAM_A SINE Alu -21 121 34 3051 188 44 6 chr5 111732028 111732689 -91352843 - L1MA7 LINE L1 -6 6285 5600 264 305 11 11 chr5 111734445 111734540 -91350992 + Charlie8 DNA MER1_type 96 190 -2227 1841 86 12 0 chr5 111735736 111735992 -91349540 - L1PA8 LINE L1 -3 6169 5911 271 259 0 0 chr5 111736901 111736955 -91348577 - MIR SINE MIR -117 91 38 180 0 0 0 chr5 111738722 111738742 -91346790 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 332 273 0 30 chr5 111741401 111741500 -91344032 - MLT1J LTR MaLR -415 96 1 21 0 0 0 chr5 111742669 111742690 -91342842 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr5 111743272 111743318 -91342214 + AT_rich Low_complexity Low_complexity 1 46 0 2310 125 14 3 chr5 111744824 111745175 -91340357 - THE1A LTR MaLR 0 355 1 11283 101 9 6 chr5 111745175 111746750 -91338782 - THE1A-int LTR MaLR 0 1580 1 2221 128 11 3 chr5 111746750 111747102 -91338430 - THE1A LTR MaLR 0 355 1 718 313 65 0 chr5 111747927 111748144 -91337388 + L2 LINE L2 2462 2692 -622 357 306 108 47 chr5 111748244 111748587 -91336945 + L2 LINE L2 2938 3301 -12 230 157 0 20 chr5 111748629 111748680 -91336852 + GA-rich Low_complexity Low_complexity 4 53 0 2124 113 10 0 chr5 111750271 111750562 -91334970 + AluSp SINE Alu 1 294 -19 284 219 18 35 chr5 111753827 111753864 -91331668 + GA-rich Low_complexity Low_complexity 2 38 -75 1653 177 3 39 chr5 111753864 111754175 -91331357 + AluJb SINE Alu 1 300 -12 284 219 18 35 chr5 111754175 111754251 -91331281 + GA-rich Low_complexity Low_complexity 38 113 0 413 272 184 0 chr5 111755651 111755798 -91329734 + MER5A DNA MER1_type 9 182 -7 180 0 0 0 chr5 111755852 111755872 -91329660 + (T)n Simple_repeat Simple_repeat 1 20 0 1243 163 58 33 chr5 111755912 111755950 -91329582 + L1MA6 LINE L1 6018 6054 -246 1996 144 60 8 chr5 111755950 111756303 -91329229 - THE1C LTR MaLR -4 371 1 1243 163 58 33 chr5 111756303 111756540 -91328992 + L1MA6 LINE L1 6054 6300 0 259 303 11 11 chr5 111758254 111758343 -91327189 + L1ME LINE L1 5518 5606 -515 3572 47 2 0 chr5 111758455 111758899 -91326633 + L1PA5 LINE L1 5709 6153 -1 202 150 25 0 chr5 111759053 111759093 -91326439 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 203 294 44 88 chr5 111759886 111760046 -91325486 - L2 LINE L2 -187 3085 2933 656 258 16 38 chr5 111761919 111762105 -91323427 + MIR SINE MIR 22 203 -59 306 0 0 0 chr5 111762135 111762169 -91323363 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr5 111763878 111763906 -91321626 + AT_rich Low_complexity Low_complexity 1 28 0 229 296 114 11 chr5 111764020 111764108 -91321424 - L2 LINE L2 -15 3257 3161 2449 71 0 3 chr5 111764144 111764455 -91321077 - AluY SINE Alu -1 310 1 23 0 0 0 chr5 111765209 111765232 -91320300 + AT_rich Low_complexity Low_complexity 1 23 0 205 125 50 0 chr5 111765394 111765434 -91320098 + CT-rich Low_complexity Low_complexity 3 44 0 581 285 102 11 chr5 111765850 111766036 -91319496 + MIR SINE MIR 46 248 -14 1756 129 3 14 chr5 111766044 111766359 -91319173 + AluSx SINE Alu 1 312 0 28 48 0 0 chr5 111767128 111767170 -91318362 + AT_rich Low_complexity Low_complexity 1 42 0 195 42 0 0 chr5 111767542 111767566 -91317966 + (TG)n Simple_repeat Simple_repeat 2 25 0 292 294 39 0 chr5 111768050 111768152 -91317380 + MIR SINE MIR 64 169 -93 185 304 71 0 chr5 111768815 111768871 -91316661 + L2 LINE L2 3251 3310 -3 26 30 0 0 chr5 111769017 111769050 -91316482 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 111771337 111771366 -91314166 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 111771484 111771512 -91314020 + AT_rich Low_complexity Low_complexity 1 28 0 2275 81 0 0 chr5 111774122 111774443 -91311089 - AluY SINE Alu 0 321 1 2066 135 0 3 chr5 111776296 111776607 -91308925 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr5 111776774 111776800 -91308732 + AT_rich Low_complexity Low_complexity 1 26 0 361 332 100 5 chr5 111777104 111777317 -91308215 - L1MC4a LINE L1 -220 5944 5707 26 30 0 0 chr5 111777317 111777350 -91308182 + AT_rich Low_complexity Low_complexity 1 33 0 27 49 0 0 chr5 111777402 111777443 -91308089 + AT_rich Low_complexity Low_complexity 1 41 0 2243 112 0 3 chr5 111777458 111777763 -91307769 + AluSx SINE Alu 1 304 -8 188 182 23 0 chr5 111777893 111777937 -91307595 + (TA)n Simple_repeat Simple_repeat 2 46 0 23 33 0 0 chr5 111778257 111778287 -91307245 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 111778532 111778574 -91306958 + AT_rich Low_complexity Low_complexity 1 42 0 510 122 0 0 chr5 111778593 111778667 -91306865 - MADE1 DNA Mariner -6 74 1 1863 122 3 49 chr5 111778888 111779215 -91306317 - AluSx SINE Alu 0 312 1 348 235 25 8 chr5 111779761 111779880 -91305652 + (TA)n Simple_repeat Simple_repeat 1 121 0 22 0 0 0 chr5 111779934 111779956 -91305576 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 111780139 111780161 -91305371 + AT_rich Low_complexity Low_complexity 1 22 0 307 213 37 37 chr5 111780196 111780360 -91305172 + (TA)n Simple_repeat Simple_repeat 1 164 0 23 0 0 0 chr5 111780753 111780776 -91304756 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 111782909 111782932 -91302600 + AT_rich Low_complexity Low_complexity 1 23 0 39 38 0 0 chr5 111783293 111783346 -91302186 + AT_rich Low_complexity Low_complexity 1 53 0 189 0 0 0 chr5 111786257 111786278 -91299254 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2005 111 99 31 chr5 111787004 111787357 -91298175 - MER51B LTR ERV1 0 377 1 267 267 0 0 chr5 111788351 111788411 -91297121 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 35 41 0 0 chr5 111788681 111788730 -91296802 + AT_rich Low_complexity Low_complexity 1 49 0 239 310 84 43 chr5 111788769 111788902 -91296630 - MIR3 SINE MIR -39 169 32 21 0 0 0 chr5 111789523 111789544 -91295988 + AT_rich Low_complexity Low_complexity 1 21 0 749 185 8 0 chr5 111789591 111789721 -91295811 + FLAM_C SINE Alu 5 135 -8 367 373 54 11 chr5 111790332 111790592 -91294940 + Charlie8 DNA MER1_type 2 272 -2145 652 239 44 34 chr5 111790958 111791163 -91294369 + MER63A DNA MER1_type 1 207 -3 324 0 0 0 chr5 111791682 111791718 -91293814 + (TG)n Simple_repeat Simple_repeat 2 37 0 784 258 98 4 chr5 111792332 111792557 -91292975 + MIR SINE MIR 2 247 -15 2071 193 52 0 chr5 111793746 111794151 -91291381 - MSTB LTR MaLR 0 426 1 209 250 18 0 chr5 111794548 111794604 -91290928 + (TA)n Simple_repeat Simple_repeat 1 57 0 368 351 127 22 chr5 111794698 111795014 -91290518 - L2 LINE L2 0 3272 2924 543 307 118 0 chr5 111795027 111795239 -91290293 - MIR SINE MIR 0 262 26 298 330 52 17 chr5 111795440 111795555 -91289977 - L2 LINE L2 0 3272 3154 32 0 0 0 chr5 111796494 111796526 -91289006 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr5 111796896 111796923 -91288609 + AT_rich Low_complexity Low_complexity 1 27 0 788 312 50 0 chr5 111798280 111798498 -91287034 - MIR SINE MIR -21 241 13 2584 30 3 0 chr5 111798787 111799086 -91286446 - AluY SINE Alu -11 300 1 243 0 0 0 chr5 111801727 111801754 -91283778 + (TG)n Simple_repeat Simple_repeat 2 28 0 282 289 33 0 chr5 111801754 111801906 -91283626 + (TA)n Simple_repeat Simple_repeat 1 157 0 22 0 0 0 chr5 111802569 111802591 -91282941 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr5 111802759 111802797 -91282735 + AT_rich Low_complexity Low_complexity 1 38 0 228 35 0 0 chr5 111803425 111803454 -91282078 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1583 203 10 0 chr5 111803641 111803937 -91281595 - AluJo SINE Alu -13 299 1 3689 105 12 23 chr5 111805191 111805547 -91279985 - MER41A LTR ERV1 0 554 203 2156 58 0 0 chr5 111805547 111805845 -91279687 - AluY SINE Alu 0 319 22 3689 105 12 23 chr5 111805845 111806046 -91279486 - MER41A LTR ERV1 -351 203 1 253 123 18 0 chr5 111808187 111808244 -91277288 + L1MA8 LINE L1 6228 6285 -6 245 350 0 39 chr5 111808566 111808669 -91276863 - MIR SINE MIR -108 154 56 191 354 0 0 chr5 111808780 111808828 -91276704 - L2 LINE L2 -8 3264 3217 595 219 9 0 chr5 111809118 111809232 -91276300 - MER63A DNA MER1_type -8 202 88 261 298 24 65 chr5 111809505 111809629 -91275903 + MIR SINE MIR 73 191 -71 486 271 60 83 chr5 111810552 111810770 -91274762 + MIR SINE MIR 37 249 -13 2083 94 0 88 chr5 111811451 111811781 -91273751 + AluSg SINE Alu 1 301 -9 530 125 0 0 chr5 111812148 111812228 -91273304 + MADE1 DNA Mariner 1 80 0 474 88 0 0 chr5 111813243 111813311 -91272221 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 0 chr5 111813311 111813333 -91272199 + AT_rich Low_complexity Low_complexity 1 22 0 225 257 119 9 chr5 111813435 111813544 -91271988 + L1ME4a LINE L1 5998 6118 -3 2330 62 28 0 chr5 111817529 111817817 -91267715 - AluY SINE Alu -15 296 1 21 57 0 0 chr5 111818040 111818075 -91267457 + AT_rich Low_complexity Low_complexity 1 35 0 27 29 0 0 chr5 111818485 111818519 -91267013 + AT_rich Low_complexity Low_complexity 1 34 0 198 0 0 0 chr5 111818734 111818756 -91266776 + (TG)n Simple_repeat Simple_repeat 2 23 0 2289 107 3 3 chr5 111819236 111819545 -91265987 - AluSx SINE Alu -1 311 3 29 60 0 0 chr5 111820074 111820124 -91265408 + AT_rich Low_complexity Low_complexity 1 50 0 238 237 21 32 chr5 111820824 111820917 -91264615 + (TA)n Simple_repeat Simple_repeat 1 92 0 690 324 62 0 chr5 111823066 111823276 -91262256 - MIR SINE MIR -25 237 15 2276 68 0 39 chr5 111823939 111824273 -91261259 + AluY SINE Alu 1 311 0 2198 127 21 34 chr5 111826157 111826535 -91258997 + THE1C LTR MaLR 3 375 0 481 320 86 34 chr5 111827529 111827798 -91257734 - LTR16C LTR ERVL 0 491 209 832 336 54 20 chr5 111828242 111828689 -91256843 - ERVL LTR ERVL -482 5282 4821 791 345 70 33 chr5 111828715 111828961 -91256571 - ERVL LTR ERVL -988 4776 4541 192 40 0 0 chr5 111828961 111828986 -91256546 + (CAA)n Simple_repeat Simple_repeat 2 26 0 791 345 70 33 chr5 111828986 111829435 -91256097 - ERVL LTR ERVL -1223 4541 4055 1033 364 37 23 chr5 111829602 111829919 -91255613 - ERVL LTR ERVL -1926 3838 3527 1391 252 37 3 chr5 111829919 111830268 -91255264 + MLT1A1 LTR MaLR 1 361 -4 1033 364 37 23 chr5 111830268 111830658 -91254874 - ERVL LTR ERVL -2237 3527 3121 237 248 153 58 chr5 111830863 111831000 -91254532 + LTR16A LTR ERVL 301 450 0 617 288 49 56 chr5 111831189 111831495 -91254037 + HERV16 LTR ERVL 261 564 -4432 271 258 0 0 chr5 111831531 111831593 -91253939 - Charlie5 DNA MER1_type -2550 62 1 226 196 59 0 chr5 111831729 111831780 -91253752 + MIR SINE MIR 119 172 -90 306 263 106 50 chr5 111831986 111832146 -91253386 - L1ME3A LINE L1 -220 5950 5782 1267 237 35 77 chr5 111832547 111833096 -91252436 - MER39 LTR ERV1 0 707 1 310 258 96 60 chr5 111833287 111833454 -91252078 + L2 LINE L2 3137 3309 -4 6552 192 126 30 chr5 111833527 111835006 -91250526 - MER52A LTR ERV1 0 1755 43 970 273 143 20 chr5 111835645 111836148 -91249384 + L2 LINE L2 2752 3312 -1 22 56 0 0 chr5 111839229 111839265 -91246267 + AT_rich Low_complexity Low_complexity 1 36 0 13224 144 31 43 chr5 111839617 111840867 -91244665 + Tigger1 DNA MER2_type 1 1265 -1153 1497 183 69 14 chr5 111840867 111841156 -91244376 - AluJb SINE Alu -7 305 1 13224 144 31 43 chr5 111841156 111841179 -91244353 + Tigger1 DNA MER2_type 1265 1287 -1131 11588 78 14 18 chr5 111841179 111842288 -91243244 - L1PA7 LINE L1 -2 6152 5041 8275 81 104 38 chr5 111842288 111843534 -91241998 - SVA Other Other 0 1386 58 955 8 33 0 chr5 111843535 111843657 -91241875 + (GGAA)n Simple_repeat Simple_repeat 1 126 0 11588 78 14 18 chr5 111843657 111844958 -91240574 - L1PA7 LINE L1 -1112 5042 3742 13224 144 31 43 chr5 111844958 111845015 -91240517 + Tigger1 DNA MER2_type 1287 1343 -1075 1542 207 0 11 chr5 111845015 111845290 -91240242 + AluJo SINE Alu 15 286 -26 13224 144 31 43 chr5 111845290 111846267 -91239265 + Tigger1 DNA MER2_type 1343 2281 -137 2098 142 3 29 chr5 111846267 111846611 -91238921 - MER1B DNA MER1_type 0 337 3 13224 144 31 43 chr5 111846611 111846742 -91238790 + Tigger1 DNA MER2_type 2281 2412 -6 243 317 211 28 chr5 111847097 111847561 -91237971 + L2 LINE L2 2142 2690 -624 238 289 79 0 chr5 111849707 111849783 -91235749 + L2 LINE L2 3232 3313 0 348 320 10 0 chr5 111849943 111850043 -91235489 + MIR SINE MIR 45 145 -63 22 0 0 0 chr5 111850082 111850104 -91235428 + AT_rich Low_complexity Low_complexity 1 22 0 267 380 47 56 chr5 111850356 111850590 -91234942 - L2 LINE L2 -841 2473 2242 33 0 0 0 chr5 111851510 111851543 -91233989 + AT_rich Low_complexity Low_complexity 1 33 0 1726 198 5 49 chr5 111851585 111851639 -91233893 - MLT1A1 LTR MaLR -12 353 298 2099 111 7 0 chr5 111851639 111851952 -91233580 - AluSg SINE Alu 0 315 1 1726 198 5 49 chr5 111851952 111852265 -91233267 - MLT1A1 LTR MaLR -67 298 1 22 0 0 0 chr5 111852463 111852485 -91233047 + AT_rich Low_complexity Low_complexity 1 22 0 319 124 73 19 chr5 111852520 111852590 -91232942 - MLT1A2 LTR MaLR 0 374 297 7833 70 5 4 chr5 111853103 111854109 -91231423 - LTR13 LTR ERVK 0 1007 1 2266 70 39 0 chr5 111854780 111855066 -91230466 + AluY SINE Alu 1 297 -14 243 287 89 20 chr5 111856853 111856954 -91228578 - MIR SINE MIR -51 211 104 282 353 29 17 chr5 111857556 111857729 -91227803 - L2 LINE L2 -944 2370 2196 214 250 24 12 chr5 111857793 111857877 -91227655 + T-rich Low_complexity Low_complexity 1 85 0 7657 24 0 0 chr5 111857877 111859107 -91226425 - L1PA3 LINE L1 -3 6152 4927 347 299 40 62 chr5 111859303 111859361 -91226171 + MER5B DNA MER1_type 6 64 -114 180 0 0 0 chr5 111859361 111859381 -91226151 + (CAAAT)n Simple_repeat Simple_repeat 1 20 0 347 299 40 62 chr5 111859381 111859499 -91226033 + MER5B DNA MER1_type 64 178 0 586 254 89 64 chr5 111861860 111862140 -91223392 + L2 LINE L2 3026 3312 -1 188 328 72 65 chr5 111862318 111862611 -91222921 - L2 LINE L2 -2 3311 3017 22 35 0 0 chr5 111862797 111862826 -91222706 + AT_rich Low_complexity Low_complexity 1 29 0 562 335 126 50 chr5 111863654 111864673 -91220859 - L2 LINE L2 -636 2678 1583 213 340 0 0 chr5 111865621 111865671 -91219861 - MIR SINE MIR -192 70 21 440 348 101 35 chr5 111865690 111866115 -91219417 - L2 LINE L2 -2345 969 517 213 341 92 60 chr5 111866315 111866632 -91218900 - L2 LINE L2 -2833 481 155 318 257 40 20 chr5 111866781 111866882 -91218650 - L2 LINE L2 -2 3270 3168 21 0 0 0 chr5 111867245 111867266 -91218266 + AT_rich Low_complexity Low_complexity 1 21 0 2308 46 0 0 chr5 111868349 111868660 -91216872 + AluY SINE Alu 1 311 0 2438 147 23 0 chr5 111869761 111870149 -91215383 + MSTB1 LTR MaLR 1 397 -35 434 349 78 9 chr5 111870162 111870380 -91215152 - MIR SINE MIR -8 254 22 205 239 0 0 chr5 111871992 111872038 -91213494 + L2 LINE L2 3258 3303 -10 594 294 76 5 chr5 111872317 111872528 -91213004 + MIR SINE MIR 29 254 -8 2059 106 14 0 chr5 111873780 111873946 -91211586 - AluY SINE Alu -15 296 123 243 0 0 0 chr5 111873946 111873973 -91211559 + (TG)n Simple_repeat Simple_repeat 2 28 0 2059 106 14 0 chr5 111873973 111874098 -91211434 - AluY SINE Alu -188 123 1 23 0 0 0 chr5 111874776 111874799 -91210733 + AT_rich Low_complexity Low_complexity 1 23 0 762 160 0 30 chr5 111874857 111875040 -91210492 - FLAM_C SINE Alu 0 179 1 2095 85 0 39 chr5 111876452 111876757 -91208775 + AluSg SINE Alu 1 293 -17 320 419 52 16 chr5 111877981 111878172 -91207360 + L2 LINE L2 3075 3272 0 745 352 83 28 chr5 111879234 111879737 -91205795 + L3 LINE CR1 1006 1536 -41 236 312 78 23 chr5 111879785 111880259 -91205273 + L1ME3 LINE L1 4742 5241 -905 598 346 55 24 chr5 111880290 111880831 -91204701 + L1ME3 LINE L1 5296 5853 -309 322 303 34 34 chr5 111881974 111882152 -91203380 - MIR SINE MIR -56 206 29 367 264 61 41 chr5 111882981 111883178 -91202354 - MER112 DNA MER1_type -59 201 1 963 232 81 18 chr5 111883442 111883727 -91201805 + MER58B DNA MER1_type 38 340 -1 605 209 41 77 chr5 111883772 111883968 -91201564 - MER63A DNA MER1_type -21 189 1 2154 120 0 9 chr5 111884575 111884891 -91200641 + AluSp SINE Alu 1 313 0 401 270 16 15 chr5 111885198 111885333 -91200199 + MIR SINE MIR 43 168 -40 975 132 38 6 chr5 111885835 111885994 -91199538 + MSTB LTR MaLR 161 324 -102 23 54 0 0 chr5 111886158 111886195 -91199337 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr5 111886233 111886267 -91199265 + AT_rich Low_complexity Low_complexity 1 34 0 1587 148 29 4 chr5 111886381 111886684 -91198848 - L1PA16 LINE L1 -10 6151 5814 4494 227 27 17 chr5 111886939 111887127 -91198405 + L1MC2 LINE L1 4295 4480 -1864 2266 81 7 3 chr5 111887127 111887425 -91198107 + AluY SINE Alu 1 299 -12 4494 227 27 17 chr5 111887425 111889247 -91196285 + L1MC2 LINE L1 4480 6319 -25 4489 227 47 31 chr5 111889260 111891346 -91194186 + L1MB7 LINE L1 3777 5898 -286 2349 63 3 31 chr5 111891380 111891697 -91193835 + AluY SINE Alu 2 309 -2 881 267 167 12 chr5 111891698 111892106 -91193426 + L1ME3A LINE L1 5696 6166 -4 268 321 18 54 chr5 111893338 111893450 -91192082 + MER5B DNA MER1_type 1 108 -70 329 308 69 37 chr5 111893465 111893634 -91191898 - MIR SINE MIR -60 148 20 253 316 42 11 chr5 111893666 111893761 -91191771 + L3 LINE CR1 81 178 -1399 488 304 70 9 chr5 111894165 111894379 -91191153 + L2 LINE L2 3087 3313 0 2789 218 8 11 chr5 111944563 111945179 -91140353 - L1MC3 LINE L1 -169 7616 7003 460 104 13 13 chr5 111946878 111946955 -91138577 + MADE1 DNA Mariner 1 77 -3 257 71 0 24 chr5 111946958 111947000 -91138532 - MADE1 DNA Mariner -39 41 1 221 95 0 24 chr5 111947598 111947640 -91137892 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 5588 19 0 0 chr5 111947644 111948281 -91137251 - L1PA3 LINE L1 0 6155 5519 5959 21 0 1 chr5 111948281 111949126 -91136406 + L1PA3 LINE L1 4693 5535 -620 5921 194 14 19 chr5 111949107 111950452 -91135080 - L1 LINE L1 -1349 4797 3460 * 1815 229 20 13 chr5 111950449 111950948 -91134584 + L1P LINE L1 4841 5341 -810 * 258 105 0 0 chr5 111951145 111951183 -91134349 + (T)n Simple_repeat Simple_repeat 1 38 0 593 237 65 32 chr5 111951509 111951695 -91133837 + MLT1E2 LTR MaLR 435 626 0 21 36 0 0 chr5 111952320 111952348 -91133184 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 111952877 111952901 -91132631 + AT_rich Low_complexity Low_complexity 1 24 0 304 278 93 33 chr5 111952901 111953052 -91132480 - MIR SINE MIR -66 196 37 215 256 0 26 chr5 111953297 111953375 -91132157 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 212 208 19 19 chr5 111953493 111953546 -91131986 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 369 174 0 63 chr5 111953547 111953737 -91131795 + (TA)n Simple_repeat Simple_repeat 2 179 0 415 244 0 59 chr5 111953743 111954102 -91131430 + (TATATG)n Simple_repeat Simple_repeat 1 337 0 198 128 0 0 chr5 111954115 111954154 -91131378 + (TA)n Simple_repeat Simple_repeat 2 40 0 798 260 170 25 chr5 111954190 111954555 -91130977 + L1MC4 LINE L1 6735 7152 -890 562 164 29 0 chr5 111954556 111954660 -91130872 + L1MA9 LINE L1 5790 5896 -293 613 250 46 37 chr5 111954670 111954886 -91130646 + L1MA9 LINE L1 6032 6249 -63 1626 263 78 16 chr5 111954906 111955572 -91129960 + L1MC4 LINE L1 7205 7911 -131 435 348 71 9 chr5 111956632 111956842 -91128690 - MIR SINE MIR -30 232 10 694 278 67 16 chr5 111957578 111957952 -91127580 - MER69 DNA AcHobo 0 2526 2134 430 229 17 34 chr5 111958004 111958122 -91127410 - L1MD3 LINE L1 -150 7845 7730 24 0 0 0 chr5 111958592 111958616 -91126916 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 111958671 111958700 -91126832 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 111958771 111958792 -91126740 + AT_rich Low_complexity Low_complexity 1 21 0 9006 24 4 0 chr5 111959423 111961261 -91124271 - L1PA2 LINE L1 -4 6151 4311 274 352 117 4 chr5 111961898 111962128 -91123404 - MIR SINE MIR -1 261 6 24 32 0 0 chr5 111962440 111962471 -91123061 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr5 111963010 111963036 -91122496 + AT_rich Low_complexity Low_complexity 1 26 0 367 316 123 18 chr5 111963128 111963356 -91122176 - MIR SINE MIR -2 260 9 315 311 108 7 chr5 111964662 111964810 -91120722 - MIR SINE MIR -3 259 97 411 38 0 0 chr5 111964922 111964975 -91120557 + (CA)n Simple_repeat Simple_repeat 1 53 0 213 39 0 0 chr5 111965235 111965261 -91120271 + (CA)n Simple_repeat Simple_repeat 1 26 0 398 313 29 50 chr5 111965265 111965505 -91120027 - L2 LINE L2 -158 3155 2921 2290 176 27 35 chr5 111965514 111965997 -91119535 + Tigger1 DNA MER2_type 1940 2418 0 736 377 65 15 chr5 111966434 111967134 -91118398 - L2 LINE L2 -1 3312 2579 327 25 0 0 chr5 111967713 111967753 -91117779 + (TG)n Simple_repeat Simple_repeat 2 41 0 231 194 45 0 chr5 111968457 111968524 -91117008 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 649 317 15 0 chr5 111969033 111969235 -91116297 - MIR SINE MIR 0 262 58 267 157 0 0 chr5 111969285 111969336 -91116196 + (CTATG)n Simple_repeat Simple_repeat 4 54 0 1453 254 38 13 chr5 111969351 111969803 -91115729 + MLT1C LTR MaLR 1 463 -4 216 348 0 0 chr5 111970065 111970134 -91115398 - MIR SINE MIR -76 132 64 24 67 0 0 chr5 111970243 111970288 -91115244 + AT_rich Low_complexity Low_complexity 1 45 0 4071 207 47 11 chr5 111971179 111972010 -91113522 + MER21B LTR ERV1 1 861 -2 993 266 76 82 chr5 111972795 111973694 -91111838 + L1MC/D LINE L1 1077 2020 -4896 2204 124 8 11 chr5 111973831 111974187 -91111345 + THE1A LTR MaLR 1 355 0 10658 118 8 6 chr5 111974187 111975765 -91109767 + THE1A-int LTR MaLR 1 1580 0 2069 154 8 11 chr5 111975765 111976121 -91109411 + THE1A LTR MaLR 1 355 0 408 214 40 75 chr5 111976187 111976388 -91109144 + L1MC/D LINE L1 5305 5498 -1443 * 1274 261 56 14 chr5 111976376 111976896 -91108636 + L1MC4a LINE L1 6950 7491 -317 1824 147 53 44 chr5 111976896 111977103 -91108429 + THE1B LTR MaLR 1 214 -150 1913 204 19 55 chr5 111977103 111977578 -91107954 - LTR22A LTR ERVK 0 458 1 1824 147 53 44 chr5 111977578 111977731 -91107801 + THE1B LTR MaLR 214 364 0 10847 115 11 0 chr5 111977731 111979294 -91106238 + THE1B-int LTR MaLR 1 1580 0 1871 124 40 119 chr5 111979294 111979689 -91105843 + THE1B LTR MaLR 1 364 0 1092 223 48 16 chr5 111979691 111980005 -91105527 + L1MD3 LINE L1 7662 7985 -10 4249 165 24 12 chr5 111980083 111980884 -91104648 + L1PB4 LINE L1 5343 6152 -4 22 0 0 0 chr5 111980884 111980906 -91104626 + AT_rich Low_complexity Low_complexity 1 22 0 352 328 92 33 chr5 111981431 111981790 -91103742 + MLT1G1 LTR MaLR 28 396 -194 432 206 22 0 chr5 111981841 111981933 -91103599 + MLT1G1 LTR MaLR 500 593 -2 682 47 0 12 chr5 111982219 111982305 -91103227 - MER4E LTR ERV1 -28 738 654 557 321 55 32 chr5 111982652 111983126 -91102406 + L1MC/D LINE L1 5551 6035 -906 225 274 39 64 chr5 111983149 111983353 -91102179 + L1MC/D LINE L1 6088 6286 -2317 1718 231 157 5 chr5 111983363 111983973 -91101559 + LTR50 LTR ERVL 3 705 -90 35 0 0 0 chr5 111984720 111984755 -91100777 + AT_rich Low_complexity Low_complexity 1 35 0 227 257 14 0 chr5 111985290 111985360 -91100172 + L1MEc LINE L1 110 180 -6216 * 1236 290 45 10 chr5 111985358 111985972 -91099560 + L1MEc LINE L1 666 1258 -4957 1464 290 134 10 chr5 111985977 111986842 -91098690 + L1M4 LINE L1 4196 5167 -979 694 341 20 26 chr5 111986811 111987163 -91098369 + L1MC4a LINE L1 12 361 -6035 * 257 0 30 0 chr5 111987163 111987196 -91098336 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1099 296 45 22 chr5 111987223 111987761 -91097771 + L1MC4a LINE L1 473 1022 -5374 679 143 57 97 chr5 111989009 111989184 -91096348 + FRAM SINE Alu 8 175 -1 705 280 110 43 chr5 111989189 111989864 -91095668 + L1MC4a LINE L1 997 1716 -4680 424 259 94 20 chr5 111989981 111990182 -91095350 + L1MC4a LINE L1 1701 1916 -4480 229 210 32 0 chr5 111990180 111990242 -91095290 + L1MC4a LINE L1 4372 4435 -1780 * 1802 238 61 74 chr5 111990321 111991255 -91094277 + L1MC4a LINE L1 4457 5378 -837 346 335 26 7 chr5 111992838 111992993 -91092539 + L1MC4a LINE L1 5781 5938 -1939 206 307 27 13 chr5 111994279 111994354 -91091178 - MIR3 SINE MIR -1 207 132 1316 186 106 8 chr5 111994375 111994639 -91090893 + AluJb SINE Alu 1 290 -22 297 308 25 8 chr5 111996648 111996768 -91088764 - MER91B DNA MER1_type -29 161 40 195 114 0 0 chr5 111997223 111997258 -91088274 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 213 0 0 chr5 111997669 111997763 -91087769 - FLAM_A SINE Alu -15 127 34 191 36 36 0 chr5 111997930 111997958 -91087574 + (TTG)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 111998023 111998044 -91087488 + AT_rich Low_complexity Low_complexity 1 21 0 2278 194 17 65 chr5 111998389 111998930 -91086602 - MLT2B2 LTR ERVL 0 515 1 524 227 97 0 chr5 111999345 111999499 -91086033 + ORSL DNA AcHobo 2 170 -105 266 371 9 0 chr5 111999746 111999851 -91085681 - MIR SINE MIR -108 154 49 21 0 0 0 chr5 112000180 112000201 -91085331 + AT_rich Low_complexity Low_complexity 1 21 0 3053 62 3 0 chr5 112000206 112000595 -91084937 - L1PA7 LINE L1 -122 6032 5643 208 244 0 0 chr5 112001775 112001820 -91083712 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr5 112001925 112001963 -91083569 + AT_rich Low_complexity Low_complexity 1 38 0 267 79 0 0 chr5 112002776 112002814 -91082718 + (TG)n Simple_repeat Simple_repeat 1 38 0 2021 113 3 0 chr5 112003862 112004173 -91081359 + AluSq SINE Alu 1 312 0 236 326 12 23 chr5 112004610 112004696 -91080836 + MIR SINE MIR 31 115 -147 210 291 25 0 chr5 112004736 112004815 -91080717 + (TA)n Simple_repeat Simple_repeat 1 81 0 788 265 47 71 chr5 112005990 112006496 -91079036 + MER34 LTR ERV1 3 496 -46 21 36 0 0 chr5 112007134 112007162 -91078370 + AT_rich Low_complexity Low_complexity 1 28 0 525 194 7 101 chr5 112007366 112007505 -91078027 + MER34B LTR ERV1 1 126 -439 180 152 0 0 chr5 112008200 112008233 -91077299 + (TATG)n Simple_repeat Simple_repeat 1 33 0 289 296 104 52 chr5 112009369 112009619 -91075913 + LTR33 LTR ERVL 116 378 -143 22 56 0 0 chr5 112010093 112010129 -91075403 + AT_rich Low_complexity Low_complexity 1 36 0 1317 202 35 47 chr5 112010915 112011303 -91074229 - MER67C LTR ERV1 0 514 146 207 139 0 0 chr5 112011303 112011339 -91074193 + (A)n Simple_repeat Simple_repeat 1 36 0 461 213 118 0 chr5 112011346 112011482 -91074050 - MER67D LTR ERV1 -357 157 6 252 264 35 11 chr5 112011987 112012074 -91073458 - MLT1J LTR MaLR -45 466 378 22 35 0 0 chr5 112012758 112012787 -91072745 + AT_rich Low_complexity Low_complexity 1 29 0 234 284 30 0 chr5 112013010 112013077 -91072455 - MIR SINE MIR -119 143 75 38 22 0 0 chr5 112013206 112013251 -91072281 + AT_rich Low_complexity Low_complexity 1 45 0 201 176 0 0 chr5 112014227 112014261 -91071271 + (TA)n Simple_repeat Simple_repeat 1 34 0 7013 47 6 0 chr5 112014476 112015394 -91070138 - L1PA5 LINE L1 0 6154 5222 1202 149 9 9 chr5 112015395 112015610 -91069922 + L1PB1 LINE L1 5923 6137 -14 1456 164 62 27 chr5 112015933 112016256 -91069276 + AluSx SINE Alu 1 312 0 257 262 24 71 chr5 112017069 112017195 -91068337 + L2 LINE L2 3148 3267 -46 26 30 0 0 chr5 112017301 112017334 -91068198 + AT_rich Low_complexity Low_complexity 1 33 0 7031 206 30 5 chr5 112017343 112019947 -91065585 - L1PA16 LINE L1 -10 6156 3496 684 227 7 7 chr5 112020330 112020471 -91065061 + MLT2F LTR ERVL 1 141 -522 597 235 30 70 chr5 112020480 112020680 -91064852 + MLT1E3 LTR MaLR 51 242 -382 241 182 23 0 chr5 112020767 112020811 -91064721 + MLT2F LTR ERVL 479 523 -140 232 184 0 118 chr5 112020854 112020930 -91064602 + MLT2C2 LTR ERVL 343 409 -55 729 54 18 18 chr5 112020930 112021042 -91064490 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 3442 95 4 0 chr5 112021045 112021519 -91064013 - THE1B-int LTR MaLR -1103 477 2 2077 143 48 31 chr5 112021520 112021878 -91063654 - THE1B LTR MaLR 0 364 1 28 29 0 0 chr5 112022038 112022073 -91063459 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 112022367 112022388 -91063144 + AT_rich Low_complexity Low_complexity 1 21 0 319 297 24 72 chr5 112022825 112023074 -91062458 + L1MC4a LINE L1 5645 5881 -1927 206 308 77 0 chr5 112025806 112025910 -91059622 + L2 LINE L2 3200 3311 -2 267 327 51 19 chr5 112026766 112026922 -91058610 + L1M3de LINE L1 1806 1966 -4687 1102 282 28 14 chr5 112027044 112027469 -91058063 + L1ME3 LINE L1 5653 6083 -79 927 163 184 84 chr5 112028188 112028520 -91057012 - MLT1A1 LTR MaLR 0 365 1 610 24 24 0 chr5 112029678 112029762 -91055770 + (TCTA)n Simple_repeat Simple_repeat 3 88 0 21 0 0 0 chr5 112030393 112030414 -91055118 + AT_rich Low_complexity Low_complexity 1 21 0 226 224 24 0 chr5 112030557 112030642 -91054890 + (TA)n Simple_repeat Simple_repeat 2 88 0 180 291 0 18 chr5 112030642 112030697 -91054835 - MIR SINE MIR -70 138 85 341 251 25 115 chr5 112030703 112030938 -91054594 - L2 LINE L2 0 3313 3100 1497 235 68 19 chr5 112030945 112031431 -91054101 + L1ME3A LINE L1 4378 4887 -1259 450 0 0 0 chr5 112031435 112031485 -91054047 + (TA)n Simple_repeat Simple_repeat 2 51 0 679 253 21 11 chr5 112031621 112031881 -91053651 + L1ME3A LINE L1 5663 5925 -241 32 43 0 0 chr5 112031921 112031967 -91053565 + AT_rich Low_complexity Low_complexity 1 46 0 2795 229 87 4 chr5 112031976 112032680 -91052852 - L1MA5 LINE L1 -30 6270 5509 3110 104 7 0 chr5 112032682 112033113 -91052419 + MER57B LTR ERV1 1 434 0 3988 159 17 6 chr5 112033113 112033762 -91051770 + MER57B-int LTR ERV1 1 656 -6881 6415 128 44 11 chr5 112033783 112034192 -91051340 + MER57B-int LTR ERV1 932 1326 -4620 195 42 0 0 chr5 112034192 112034216 -91051316 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6415 128 44 11 chr5 112034216 112034952 -91050580 + MER57B-int LTR ERV1 1326 2037 -3909 189 0 0 0 chr5 112034952 112034973 -91050559 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6415 128 44 11 chr5 112034973 112035661 -91049871 + MER57B-int LTR ERV1 2037 2930 -3016 300 296 0 17 chr5 112035664 112035779 -91049753 + L1ME3A LINE L1 6058 6170 0 2346 112 67 33 chr5 112035791 112036272 -91049260 + PABL_A-int LTR ERV1 1833 2590 -2425 959 139 0 0 chr5 112036277 112036421 -91049111 + MER57B LTR ERV1 291 434 0 885 157 41 12 chr5 112036421 112036593 -91048939 - L1MA5 LINE L1 -781 5510 5334 506 224 112 18 chr5 112036589 112036759 -91048773 + L1ME1 LINE L1 5976 6161 -5 * 578 354 138 16 chr5 112037051 112037545 -91047987 - L2 LINE L2 -410 2904 2351 545 237 44 7 chr5 112038445 112038580 -91046952 - MER58B DNA MER1_type -15 326 187 3761 174 27 7 chr5 112038590 112039548 -91045984 - L1MA4 LINE L1 -323 5977 5001 287 237 0 17 chr5 112039548 112039607 -91045925 - MER58B DNA MER1_type -283 58 1 180 111 0 0 chr5 112039877 112039904 -91045628 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 378 61 0 0 chr5 112040020 112040069 -91045463 + (TG)n Simple_repeat Simple_repeat 2 50 0 940 246 29 0 chr5 112040208 112040415 -91045117 - MER20 DNA MER1_type 0 219 7 693 202 8 0 chr5 112040567 112040696 -91044836 - FLAM_A SINE Alu -3 130 1 28 0 0 0 chr5 112040696 112040724 -91044808 + AT_rich Low_complexity Low_complexity 1 28 0 286 79 0 0 chr5 112040926 112040964 -91044568 - L1M1 LINE L1 -686 5616 5579 1223 70 0 0 chr5 112040965 112041123 -91044409 + L1MA1 LINE L1 6141 6298 -4 227 241 105 78 chr5 112042333 112042524 -91043008 + L1ME4a LINE L1 5800 5995 -126 324 281 69 34 chr5 112043059 112043285 -91042247 + L1ME4a LINE L1 5576 5817 -315 454 288 96 39 chr5 112043372 112043653 -91041879 + L1ME4a LINE L1 5823 6119 -2 446 336 73 69 chr5 112044944 112045438 -91040094 + L2 LINE L2 2014 2509 -805 12126 197 51 14 chr5 112045451 112049339 -91036193 + L1PB2 LINE L1 2118 6149 -2 899 311 97 27 chr5 112049340 112049813 -91035719 + L2 LINE L2 2546 3047 -266 322 284 65 76 chr5 112050343 112050618 -91034914 - Tigger8 DNA MER2_type -349 317 46 23 33 0 0 chr5 112051658 112051688 -91033844 + AT_rich Low_complexity Low_complexity 1 30 0 608 174 0 26 chr5 112051787 112051902 -91033630 - FLAM_C SINE Alu -1 142 31 293 291 75 93 chr5 112052323 112052381 -91033151 - MLT1K LTR MaLR -323 265 207 2073 141 48 20 chr5 112052381 112052735 -91032797 - THE1B LTR MaLR 0 364 1 293 291 75 93 chr5 112052735 112052944 -91032588 - MLT1K LTR MaLR -381 207 3 1199 210 14 38 chr5 112053286 112053576 -91031956 + AluJo SINE Alu 9 291 -21 304 362 0 17 chr5 112054118 112054234 -91031298 - MIR3 SINE MIR -10 198 85 332 189 27 0 chr5 112055578 112055652 -91029880 + L1M4 LINE L1 3155 3230 -2916 5232 223 71 28 chr5 112055658 112056048 -91029484 + L1MC3 LINE L1 6254 6625 -1160 1914 195 14 0 chr5 112056048 112056407 -91029125 - MLT1A1 LTR MaLR 0 365 2 5232 223 71 28 chr5 112056407 112057473 -91028059 + L1MC3 LINE L1 6625 7774 -11 1676 234 81 33 chr5 112057474 112058119 -91027413 - L1MCb LINE L1 -4851 1194 569 24 0 0 0 chr5 112058222 112058246 -91027286 + AT_rich Low_complexity Low_complexity 1 24 0 1012 211 84 0 chr5 112058355 112058616 -91026916 - L1MA9 LINE L1 0 6312 6030 615 287 88 41 chr5 112058625 112059158 -91026374 - L1M4 LINE L1 -4969 1573 1016 448 175 13 32 chr5 112059726 112059880 -91025652 + (TA)n Simple_repeat Simple_repeat 1 151 0 311 221 12 0 chr5 112059899 112059985 -91025547 + (TA)n Simple_repeat Simple_repeat 1 87 0 823 240 32 29 chr5 112060979 112061225 -91024307 - L1MC3 LINE L1 -367 7418 7172 227 313 0 15 chr5 112061231 112061298 -91024234 - MLT1F1 LTR MaLR -465 102 37 304 219 79 0 chr5 112061299 112061413 -91024119 - L1MC3 LINE L1 -687 7098 6976 255 31 0 0 chr5 112063709 112063741 -91021791 + (CA)n Simple_repeat Simple_repeat 1 32 0 22 35 0 0 chr5 112064460 112064489 -91021043 + AT_rich Low_complexity Low_complexity 1 29 0 231 297 16 0 chr5 112064642 112064706 -91020826 + MLT1L LTR MaLR 193 257 -358 22 0 0 0 chr5 112065460 112065482 -91020050 + AT_rich Low_complexity Low_complexity 1 22 0 201 147 0 0 chr5 112065526 112065560 -91019972 + (T)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr5 112065919 112065965 -91019567 + (CA)n Simple_repeat Simple_repeat 1 46 0 308 24 0 24 chr5 112067529 112067571 -91017961 + (TAA)n Simple_repeat Simple_repeat 2 42 0 288 0 0 0 chr5 112068118 112068150 -91017382 + (TG)n Simple_repeat Simple_repeat 1 32 0 182 150 25 0 chr5 112068154 112068194 -91017338 + GA-rich Low_complexity Low_complexity 2 42 0 256 372 51 29 chr5 112068738 112068875 -91016657 + L2 LINE L2 3174 3313 0 389 274 34 0 chr5 112069690 112069807 -91015725 - L1ME1 LINE L1 -36 6130 6010 3221 191 52 81 chr5 112069825 112070670 -91014862 - L1MB8 LINE L1 -1 6177 5389 2444 78 0 0 chr5 112070670 112070977 -91014555 - AluY SINE Alu -4 307 1 3221 191 52 81 chr5 112070977 112071174 -91014358 - L1MB8 LINE L1 -789 5389 5188 539 237 68 23 chr5 112071158 112071377 -91014155 - L1M4 LINE L1 -754 5392 5164 * 276 302 10 0 chr5 112071434 112071530 -91014002 - L1M4 LINE L1 -1208 4938 4842 653 278 106 27 chr5 112071562 112071709 -91013823 - L1M4 LINE L1 -1369 4777 4643 378 0 0 0 chr5 112071709 112071751 -91013781 + (TA)n Simple_repeat Simple_repeat 1 42 0 653 278 106 27 chr5 112071751 112072121 -91013411 - L1M4 LINE L1 -1503 4643 4219 5765 140 9 15 chr5 112072304 112073371 -91012161 - L1PA15 LINE L1 0 6165 5104 5346 209 18 32 chr5 112073389 112074885 -91010647 - L1PA13 LINE L1 -4137 2660 1169 375 210 116 29 chr5 112074895 112075033 -91010499 + L1PA13 LINE L1 1298 1447 -4979 514 298 0 0 chr5 112075033 112075174 -91010358 + L2 LINE L2 3173 3313 0 682 235 39 9 chr5 112076451 112076658 -91008874 + MER61D LTR ERV1 338 546 -18 4500 258 19 12 chr5 112076671 112077883 -91007649 + MER61D-int LTR ERV1 29 1249 -5747 292 143 0 0 chr5 112077925 112077967 -91007565 - MER52-int LTR ERV1 -2207 4884 4843 2208 99 0 7 chr5 112079009 112079311 -91006221 - AluSq SINE Alu -13 300 1 2393 179 11 24 chr5 112080263 112080732 -91004800 - MLT1C LTR MaLR 0 467 5 1462 204 136 16 chr5 112081160 112081542 -91003990 + MSTA LTR MaLR 1 428 0 180 194 0 0 chr5 112081596 112081627 -91003905 + MIR SINE MIR 64 94 -114 14698 87 7 0 chr5 112081641 112083614 -91001918 - L1PA5 LINE L1 -4159 1987 1 26262 47 3 6 chr5 112083617 112087771 -90997761 + L1PA5 LINE L1 2008 6148 -6 218 250 19 0 chr5 112088315 112088367 -90997165 + MIR SINE MIR 89 141 -121 23 0 0 0 chr5 112091065 112091088 -90994444 + AT_rich Low_complexity Low_complexity 1 23 0 2222 165 109 7 chr5 112091801 112092250 -90993282 - LOR1a LTR ERV1 -2 495 1 21 0 0 0 chr5 112092268 112092289 -90993243 + AT_rich Low_complexity Low_complexity 1 21 0 215 243 68 40 chr5 112094746 112094820 -90990712 - MIR SINE MIR -114 148 73 250 246 16 0 chr5 112095104 112095165 -90990367 + MLT1J LTR MaLR 106 167 -344 318 260 169 26 chr5 112095231 112095385 -90990147 + MLT1L LTR MaLR 312 487 -128 1625 252 57 30 chr5 112095590 112096140 -90989392 + MER77 LTR ERV1 60 595 -11 1792 225 61 9 chr5 112096398 112096842 -90988690 - MLT1C LTR MaLR 0 467 1 821 215 121 18 chr5 112098637 112098860 -90986672 + MLT1D LTR MaLR 227 472 -33 620 52 0 103 chr5 112099102 112099199 -90986333 - MER11B LTR ERVK -440 796 710 31 88 0 0 chr5 112099301 112099381 -90986151 + AT_rich Low_complexity Low_complexity 1 80 0 757 158 24 0 chr5 112099476 112099603 -90985929 + L1PA16 LINE L1 6028 6157 -9 1814 144 18 0 chr5 112099856 112100140 -90985392 - AluSx SINE Alu -3 309 21 628 286 68 0 chr5 112101051 112101243 -90984289 + MER58A DNA MER1_type 2 206 -18 247 215 9 75 chr5 112101711 112101818 -90983714 - LTR67 LTR ERVL 0 557 458 223 231 0 0 chr5 112102688 112102727 -90982805 + polypyrimidine Low_complexity Low_complexity 1 39 0 2434 63 0 22 chr5 112103660 112103977 -90981555 + AluY SINE Alu 1 310 -1 474 132 0 0 chr5 112104078 112104146 -90981386 - Tigger3(Golem) DNA MER2_type -100 2929 2862 275 93 0 0 chr5 112104195 112104238 -90981294 + Tigger3(Golem) DNA MER2_type 2786 2828 -201 * 713 192 14 132 chr5 112104230 112104343 -90981189 - MER7A DNA MER2_type -2847 191 117 2308 81 0 31 chr5 112104343 112104664 -90980868 + AluY SINE Alu 1 311 0 713 192 14 132 chr5 112104664 112104769 -90980763 - MER7A DNA MER2_type -2921 117 1 21 71 0 0 chr5 112105868 112105910 -90979622 + AT_rich Low_complexity Low_complexity 1 42 0 343 345 51 15 chr5 112106032 112106229 -90979303 - L1ME LINE L1 -337 5784 5581 282 106 0 0 chr5 112107354 112107401 -90978131 + (TG)n Simple_repeat Simple_repeat 2 48 0 537 137 74 0 chr5 112107433 112107528 -90978004 - MSTD LTR MaLR -294 102 1 1161 266 66 44 chr5 112107961 112108415 -90977117 + MLT1C LTR MaLR 4 467 0 21 0 0 0 chr5 112109251 112109272 -90976260 + AT_rich Low_complexity Low_complexity 1 21 0 1947 120 3 40 chr5 112111273 112111599 -90973933 - AluSx SINE Alu 0 312 1 4170 230 55 27 chr5 112114130 112116088 -90969444 - L1MC2 LINE L1 -10 6334 4319 10836 238 46 34 chr5 112116158 112117935 -90967597 - L1PB4 LINE L1 -15 6843 5089 2044 142 0 0 chr5 112117935 112118231 -90967301 + AluSx SINE Alu 1 296 -16 10836 238 46 34 chr5 112118231 112119365 -90966167 - L1PB4 LINE L1 -1769 5089 3970 270 0 0 0 chr5 112119365 112119395 -90966137 + (TTA)n Simple_repeat Simple_repeat 1 30 0 10836 238 46 34 chr5 112119395 112121035 -90964497 - L1PB4 LINE L1 -2888 3970 2068 2060 85 48 27 chr5 112121035 112121330 -90964202 + AluY SINE Alu 3 303 -8 10836 238 46 34 chr5 112121330 112122296 -90963236 - L1PB4 LINE L1 -4790 2068 1115 464 321 28 87 chr5 112122593 112122880 -90962652 - L1PB4 LINE L1 -5787 1062 793 1032 261 58 55 chr5 112123525 112123873 -90961659 - L1PB4 LINE L1 -6491 358 10 1514 271 68 33 chr5 112123889 112123978 -90961554 - L1M4 LINE L1 -1889 4257 4173 186 43 0 0 chr5 112123978 112124001 -90961531 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1514 271 68 33 chr5 112124001 112124569 -90960963 - L1M4 LINE L1 -1973 4173 3577 513 238 8 0 chr5 112124690 112124812 -90960720 - L1MCb LINE L1 -2421 4143 4021 397 177 51 0 chr5 112124826 112124905 -90960627 - MLT1B LTR MaLR 0 390 308 3080 186 86 4 chr5 112124906 112125582 -90959950 - MLT1C-int LTR MaLR -638 733 3 868 233 98 73 chr5 112125587 112126038 -90959494 - MLT1C LTR MaLR -2 465 4 448 234 99 7 chr5 112126039 112126312 -90959220 - L1MCb LINE L1 -4024 2540 2202 529 134 118 0 chr5 112126322 112126449 -90959083 - L1MCb LINE L1 -4418 2146 2005 3053 215 44 49 chr5 112126473 112127780 -90957752 - L1MB1 LINE L1 -10 6561 5322 342 263 151 14 chr5 112127773 112128058 -90957474 - L1MB1 LINE L1 -2753 3673 3350 * 582 217 69 6 chr5 112128074 112128147 -90957385 + L1M3d LINE L1 1048 1115 -4776 207 0 0 0 chr5 112128147 112128170 -90957362 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 582 217 69 6 chr5 112128170 112128271 -90957261 + L1M3d LINE L1 1115 1233 -4658 691 224 52 37 chr5 112128316 112128584 -90956948 - L1MB1 LINE L1 -3098 3328 3057 1601 216 48 37 chr5 112128620 112129205 -90956327 - L1MB1 LINE L1 -4851 1577 982 2214 270 52 58 chr5 112129205 112130213 -90955319 - L1MCb LINE L1 -5007 1038 37 2171 151 52 27 chr5 112130795 112131200 -90954332 + MSTA LTR MaLR 2 416 -12 221 169 17 0 chr5 112131535 112131594 -90953938 + (TA)n Simple_repeat Simple_repeat 2 61 0 484 239 55 49 chr5 112132367 112132530 -90953002 + MIR SINE MIR 95 258 -4 513 332 47 9 chr5 112133422 112133636 -90951896 - MIR SINE MIR -11 251 30 25 0 0 0 chr5 112134188 112134213 -90951319 + AT_rich Low_complexity Low_complexity 1 25 0 1031 225 73 45 chr5 112134401 112134756 -90950776 + MLT1A1 LTR MaLR 1 365 0 8530 200 21 15 chr5 112135016 112137816 -90947716 - L1PA15 LINE L1 -1 6815 4006 3834 230 19 1 chr5 112137814 112138649 -90946883 - L1PA15 LINE L1 -4706 2081 1232 * 2913 267 34 7 chr5 112138641 112139371 -90946161 - L1PA15 LINE L1 -6032 755 6 * 255 250 60 0 chr5 112139611 112139695 -90945837 + L1ME3 LINE L1 5945 6033 -129 465 312 64 16 chr5 112139699 112139949 -90945583 + MLT1C LTR MaLR 206 467 0 22 0 0 0 chr5 112140366 112140388 -90945144 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 112140691 112140719 -90944813 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 112140927 112140954 -90944578 + AT_rich Low_complexity Low_complexity 1 27 0 1460 214 24 66 chr5 112142159 112142276 -90943256 - L1MD1 LINE L1 -8 6234 6114 1843 118 10 26 chr5 112142276 112142581 -90942951 - L1PB4 LINE L1 -7 6149 5850 1460 214 24 66 chr5 112142581 112142931 -90942601 - L1MD1 LINE L1 -128 6114 5787 6171 225 97 40 chr5 112142955 112143587 -90941945 + L1MC3 LINE L1 5516 6111 -1674 192 77 0 0 chr5 112143587 112143613 -90941919 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6171 225 97 40 chr5 112143613 112144388 -90941144 + L1MC3 LINE L1 6111 6841 -944 306 87 0 0 chr5 112144388 112144434 -90941098 + (CA)n Simple_repeat Simple_repeat 2 47 0 6171 225 97 40 chr5 112144434 112144557 -90940975 + L1MC3 LINE L1 6841 6956 -829 5228 159 10 18 chr5 112144557 112145467 -90940065 - MER4D LTR ERV1 0 903 1 6171 225 97 40 chr5 112145467 112146063 -90939469 + L1MC3 LINE L1 6956 7765 -20 2368 84 3 3 chr5 112146533 112146841 -90938691 - AluSx SINE Alu -4 308 1 398 308 53 45 chr5 112147280 112147527 -90938005 + MIR SINE MIR 1 249 -13 22 0 0 0 chr5 112147977 112147999 -90937533 + AT_rich Low_complexity Low_complexity 1 22 0 2652 85 98 5 chr5 112149209 112149619 -90935913 - LTR7 LTR ERV1 -2 448 1 2155 106 57 14 chr5 112149625 112149994 -90935538 - HERVH LTR ERV1 -7 7706 7322 1401 125 19 0 chr5 112149992 112150208 -90935324 - HERVH LTR ERV1 -1894 5819 5600 * 4176 143 18 1 chr5 112150209 112150860 -90934672 - HERVH LTR ERV1 -2564 5149 4488 3374 107 4 6 chr5 112150862 112151365 -90934167 - HERVH LTR ERV1 -3720 3993 3492 644 145 138 53 chr5 112151355 112151507 -90934025 - HERVH LTR ERV1 -4423 3290 3126 * 11417 125 52 63 chr5 112151479 112152926 -90932606 - HERVH LTR ERV1 -4726 2987 1327 184 297 109 22 chr5 112152926 112153064 -90932468 - L2 LINE L2 -732 2582 2433 11417 125 52 63 chr5 112153064 112154164 -90931368 - HERVH LTR ERV1 -6386 1327 216 2451 85 122 8 chr5 112154166 112154568 -90930964 - LTR7 LTR ERV1 -2 448 1 500 200 23 0 chr5 112155250 112155425 -90930107 + (TA)n Simple_repeat Simple_repeat 1 179 0 237 288 0 0 chr5 112155426 112155492 -90930040 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 267 93 0 19 chr5 112155493 112155547 -90929985 - LTR66 LTR ERVL -170 440 388 395 296 0 0 chr5 112155548 112155683 -90929849 + (TA)n Simple_repeat Simple_repeat 1 135 0 24 53 0 0 chr5 112156155 112156193 -90929339 + AT_rich Low_complexity Low_complexity 1 38 0 243 250 0 0 chr5 112156654 112156722 -90928810 + (CATA)n Simple_repeat Simple_repeat 3 70 0 4699 144 18 1 chr5 112156800 112157564 -90927968 + L1PA14 LINE L1 5385 6161 0 550 236 8 41 chr5 112157699 112157822 -90927710 - MER58A DNA MER1_type 0 119 1 28 48 0 0 chr5 112158404 112158446 -90927086 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr5 112158880 112158907 -90926625 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr5 112158940 112158972 -90926560 + AT_rich Low_complexity Low_complexity 1 32 0 292 296 11 11 chr5 112159985 112160073 -90925459 + MER5A DNA MER1_type 9 96 -93 228 375 62 9 chr5 112160113 112160225 -90925307 - L2 LINE L2 -17 3255 3138 39 50 0 0 chr5 112160514 112160574 -90924958 + AT_rich Low_complexity Low_complexity 1 60 0 1436 252 60 51 chr5 112160589 112161251 -90924281 - L1MC4 LINE L1 -77 7965 7298 27 73 0 0 chr5 112161292 112161347 -90924185 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 112161415 112161436 -90924096 + AT_rich Low_complexity Low_complexity 1 21 0 2170 86 4 0 chr5 112161553 112161867 -90923665 - AluSc SINE Alu 0 318 4 23 33 0 0 chr5 112163371 112163401 -90922131 + AT_rich Low_complexity Low_complexity 1 30 0 215 256 0 0 chr5 112163722 112163765 -90921767 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 628 333 81 60 chr5 112163882 112164362 -90921170 - MLT1H LTR MaLR 0 549 60 3005 143 91 43 chr5 112164522 112165180 -90920352 - L1MA8 LINE L1 -8 6283 5594 1863 144 97 37 chr5 112165760 112166162 -90919370 + MSTA LTR MaLR 3 428 0 805 278 81 96 chr5 112166181 112166723 -90918809 + MLT1G3 LTR MaLR 39 521 -9 407 311 8 8 chr5 112166912 112167044 -90918488 - LTR33 LTR ERVL -389 132 1 28 0 0 0 chr5 112167337 112167365 -90918167 + AT_rich Low_complexity Low_complexity 1 28 0 43422 44 1 0 chr5 112168577 112174714 -90910818 + L1PA4 LINE L1 6 6151 -4 2232 228 93 9 chr5 112174734 112175470 -90910062 + L1ME2 LINE L1 5239 6042 -122 194 79 0 26 chr5 112175674 112175712 -90909820 + (TTTTA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr5 112175790 112175814 -90909718 + AT_rich Low_complexity Low_complexity 1 24 0 4250 132 6 30 chr5 112175886 112176619 -90908913 + L1PA13 LINE L1 5446 6160 -3 4422 181 38 13 chr5 112178486 112179942 -90905590 + L1MA9 LINE L1 4169 5805 -507 306 0 0 0 chr5 112179942 112179976 -90905556 + (CA)n Simple_repeat Simple_repeat 2 35 0 4422 181 38 13 chr5 112179976 112180431 -90905101 + L1MA9 LINE L1 5805 6247 -65 1765 74 0 0 chr5 112180444 112180674 -90904858 + L1PA8 LINE L1 5942 6171 -1 338 147 59 0 chr5 112180675 112180743 -90904789 + L1MA9 LINE L1 6241 6312 0 253 335 222 9 chr5 112181233 112181445 -90904087 + MIR SINE MIR 6 262 0 358 315 37 0 chr5 112181522 112181630 -90903902 + LTR16A LTR ERVL 29 140 -310 204 111 0 0 chr5 112181921 112181957 -90903575 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 1134 286 97 18 chr5 112182370 112183091 -90902441 + Charlie2 DNA MER1_type 1856 2633 -229 483 291 100 22 chr5 112184101 112184372 -90901160 + MER110 LTR ERV1 166 457 -34 305 341 0 14 chr5 112185319 112185646 -90899886 + A-rich Low_complexity Low_complexity 1 322 0 210 238 37 37 chr5 112185614 112185778 -90899754 + (CAAGA)n Simple_repeat Simple_repeat 2 165 0 * 311 262 151 29 chr5 112185779 112185985 -90899547 + L1 LINE L1 3072 3302 -2844 380 0 0 0 chr5 112186147 112186192 -90899340 + MADE1 DNA Mariner 36 80 0 393 129 0 0 chr5 112186413 112186483 -90899049 + (TG)n Simple_repeat Simple_repeat 1 70 0 420 169 0 0 chr5 112186790 112186867 -90898665 + (TG)n Simple_repeat Simple_repeat 2 78 0 25 51 0 0 chr5 112188115 112188154 -90897378 + AT_rich Low_complexity Low_complexity 1 39 0 2324 67 6 22 chr5 112188249 112188565 -90896967 - AluY SINE Alu 0 311 1 223 231 0 0 chr5 112189488 112189527 -90896005 + polypurine Low_complexity Low_complexity 1 39 0 232 208 19 75 chr5 112190393 112190499 -90895033 + LTR67 LTR ERVL 458 557 0 647 281 68 0 chr5 112190967 112191159 -90894373 - MER58A DNA MER1_type -18 206 2 1782 148 18 0 chr5 112192074 112192358 -90893174 + AluSx SINE Alu 21 309 -3 741 165 24 0 chr5 112192611 112192738 -90892794 - L1PA16 LINE L1 -9 6157 6028 31 88 0 0 chr5 112192832 112192912 -90892620 + AT_rich Low_complexity Low_complexity 1 80 0 4346 153 19 3 chr5 112192962 112193708 -90891824 - L1PA16 LINE L1 -154 6012 5255 2060 233 29 4 chr5 112193723 112194280 -90891252 + L1PA16 LINE L1 4670 5240 -906 25 0 0 0 chr5 112195269 112195294 -90890238 + AT_rich Low_complexity Low_complexity 1 25 0 5413 203 8 14 chr5 112195705 112197712 -90887820 - L1PA13 LINE L1 -3 6160 4154 28 0 0 0 chr5 112197743 112197771 -90887761 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 112198509 112198545 -90886987 + AT_rich Low_complexity Low_complexity 1 36 0 536 200 8 0 chr5 112198558 112198688 -90886844 + GA-rich Low_complexity Low_complexity 2 132 0 195 286 57 0 chr5 112200256 112200326 -90885206 + MIR SINE MIR 78 151 -111 29 98 0 0 chr5 112200374 112200466 -90885066 + AT_rich Low_complexity Low_complexity 1 92 0 263 260 120 24 chr5 112201157 112201365 -90884167 + L1ME1 LINE L1 1860 2087 -4453 23 0 0 0 chr5 112201369 112201392 -90884140 + AT_rich Low_complexity Low_complexity 1 23 0 2108 141 12 0 chr5 112201493 112201834 -90883698 - L1PA12 LINE L1 -105 6063 5719 307 130 26 78 chr5 112201831 112201849 -90883683 + L1PA13 LINE L1 6090 6107 -56 * 2304 133 83 8 chr5 112201849 112202247 -90883285 - MSTA LTR MaLR 0 428 1 307 130 26 78 chr5 112202247 112202305 -90883227 + L1PA13 LINE L1 6107 6162 -1 211 267 33 0 chr5 112202314 112202374 -90883158 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 1497 279 50 15 chr5 112202417 112203901 -90881631 + L1ME1 LINE L1 4919 6555 -5 394 347 36 19 chr5 112204037 112204209 -90881323 + MER5B DNA MER1_type 1 186 -3 213 94 0 0 chr5 112204220 112204252 -90881280 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2383 238 64 49 chr5 112204274 112205236 -90880296 + L1ME1 LINE L1 5189 6163 -3 23 33 0 0 chr5 112205342 112205372 -90880160 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 112208234 112208270 -90877262 + AT_rich Low_complexity Low_complexity 1 36 0 1395 147 27 0 chr5 112208800 112209025 -90876507 - AluSg/x SINE Alu -14 298 68 5833 174 72 7 chr5 112209025 112210959 -90874573 - L1PBa LINE L1 -4470 2393 188 406 212 12 0 chr5 112210971 112211056 -90874476 - L1PBa LINE L1 -6742 121 36 1570 101 0 0 chr5 112211896 112212103 -90873429 + AluSq SINE Alu 101 307 -6 296 286 45 38 chr5 112212153 112212197 -90873335 + MERVL LTR ERVL 4199 4241 -1244 966 222 145 22 chr5 112212197 112212521 -90873011 - THE1B LTR MaLR 0 364 1 296 286 45 38 chr5 112212521 112212609 -90872923 + MERVL LTR ERVL 4241 4332 -1153 26 0 0 0 chr5 112212780 112212806 -90872726 + AT_rich Low_complexity Low_complexity 1 26 0 2117 108 0 0 chr5 112212982 112213260 -90872272 - AluSg SINE Alu -7 303 26 277 259 34 75 chr5 112213499 112213646 -90871886 + MERVL LTR ERVL 4555 4695 -301 262 343 110 16 chr5 112213938 112214183 -90871349 + LTR16A LTR ERVL 24 291 -159 939 314 73 24 chr5 112215260 112215672 -90869860 - L1MDa LINE L1 -4411 2129 1739 1802 216 51 5 chr5 112215672 112216085 -90869447 + MSTB1 LTR MaLR 1 432 0 939 314 73 24 chr5 112216085 112216515 -90869017 - L1MDa LINE L1 -4801 1739 1245 253 57 0 0 chr5 112216542 112216577 -90868955 - L1M2 LINE L1 -487 5825 5791 698 150 30 162 chr5 112216587 112216821 -90868711 + L1M2 LINE L1 5534 5736 -555 1867 210 140 13 chr5 112216980 112217397 -90868135 + MLT2B2 LTR ERVL 1 482 -33 563 62 12 0 chr5 112217397 112217477 -90868055 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1867 210 140 13 chr5 112217477 112217516 -90868016 + MLT2B2 LTR ERVL 482 515 0 1674 212 85 16 chr5 112218135 112218560 -90866972 - MLT1C LTR MaLR 0 467 14 24 32 0 0 chr5 112219173 112219204 -90866328 + AT_rich Low_complexity Low_complexity 1 31 0 1959 133 3 3 chr5 112219212 112219526 -90866006 + AluSx SINE Alu 1 314 0 224 302 0 0 chr5 112220233 112220296 -90865236 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 23 33 0 0 chr5 112220899 112220929 -90864603 + AT_rich Low_complexity Low_complexity 1 30 0 587 323 54 22 chr5 112222607 112222830 -90862702 + MLT1I LTR MaLR 4 233 -176 1816 242 29 50 chr5 112223294 112223948 -90861584 + L1M4 LINE L1 4661 5300 -846 2393 202 38 30 chr5 112224389 112225247 -90860285 + L1ME1 LINE L1 4661 5515 -743 1019 94 72 33 chr5 112225247 112225428 -90860104 + MSTA LTR MaLR 1 188 -240 672 282 89 19 chr5 112225430 112225746 -90859786 + L1ME1 LINE L1 5827 6164 -2 609 316 28 23 chr5 112225844 112226059 -90859473 - MIR SINE MIR -29 233 18 1181 168 23 119 chr5 112226212 112226305 -90859227 - L1MA7 LINE L1 -8 6283 6183 814 241 0 0 chr5 112226305 112226471 -90859061 - FAM SINE Alu -9 166 1 1181 168 23 119 chr5 112226471 112226722 -90858810 - L1MA7 LINE L1 -108 6183 5972 259 237 0 118 chr5 112226742 112226835 -90858697 + L2 LINE L2 3227 3308 -5 265 344 10 21 chr5 112228898 112228994 -90856538 - L2 LINE L2 -27 3245 3151 8906 161 53 65 chr5 112229175 112229897 -90855635 + Tigger2 DNA MER2_type 2 730 -1988 2028 139 3 0 chr5 112229897 112230198 -90855334 + AluSx SINE Alu 11 312 0 8906 161 53 65 chr5 112230198 112230646 -90854886 + Tigger2 DNA MER2_type 730 1181 -1537 2304 99 0 0 chr5 112230646 112230949 -90854583 + AluY SINE Alu 1 303 -8 1780 133 3 77 chr5 112230957 112231294 -90854238 + AluSx SINE Alu 1 312 0 8906 161 53 65 chr5 112231294 112232112 -90853420 + Tigger2 DNA MER2_type 1188 1978 -740 2437 183 8 2 chr5 112232113 112232534 -90852998 + MSTB LTR MaLR 1 390 0 7115 190 63 20 chr5 112232534 112232944 -90852588 + MSTB-int LTR MaLR 1 392 -1259 2361 96 3 0 chr5 112232944 112233256 -90852276 + AluSp SINE Alu 1 313 0 7115 190 63 20 chr5 112233256 112234312 -90851220 + MSTB-int LTR MaLR 392 1530 -121 4895 130 122 119 chr5 112234334 112235757 -90849775 + pTR5 LTR ERV1 31 558 -156 518 177 16 24 chr5 112235758 112235882 -90849650 + MSTB-int LTR MaLR 1527 1649 -2 2273 189 9 28 chr5 112235884 112236272 -90849260 + MSTB LTR MaLR 1 382 -44 2184 87 3 17 chr5 112236272 112236570 -90848962 - AluY SINE Alu -17 294 1 2273 189 9 28 chr5 112236570 112236614 -90848918 + MSTB LTR MaLR 382 425 -1 4006 150 32 31 chr5 112236614 112237279 -90848253 + Tigger2 DNA MER2_type 1979 2642 -76 1587 208 11 0 chr5 112237279 112237558 -90847974 + AluJo SINE Alu 1 282 -30 189 74 0 0 chr5 112237561 112237588 -90847944 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4006 150 32 31 chr5 112237588 112237657 -90847875 + Tigger2 DNA MER2_type 2643 2718 0 24 53 0 0 chr5 112237682 112237720 -90847812 + AT_rich Low_complexity Low_complexity 1 38 0 279 0 0 0 chr5 112238032 112238063 -90847469 + (TG)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr5 112238694 112238716 -90846816 + AT_rich Low_complexity Low_complexity 1 22 0 6722 68 12 2 chr5 112238719 112239604 -90845928 - L1PA7 LINE L1 -7 6147 5254 22 35 0 0 chr5 112240697 112240726 -90844806 + AT_rich Low_complexity Low_complexity 1 29 0 5342 103 21 13 chr5 112241062 112241851 -90843681 + MER11B LTR ERVK 1 796 -440 780 224 121 18 chr5 112242093 112242316 -90843216 - MLT1D LTR MaLR -33 472 227 1824 223 61 9 chr5 112244108 112244552 -90840980 + MLT1C LTR MaLR 1 467 0 3920 34 6 0 chr5 112245345 112245814 -90839718 - L1PA3 LINE L1 0 6155 5684 40 0 0 36 chr5 112246119 112246139 -90839393 + AT_rich Low_complexity Low_complexity 1 20 -33 1746 212 0 0 chr5 112246139 112246446 -90839086 + 7SLRNA srpRNA srpRNA 1 307 -13 40 0 0 36 chr5 112246446 112246480 -90839052 + AT_rich Low_complexity Low_complexity 20 53 0 247 184 0 0 chr5 112247506 112247555 -90837977 - L1MB8 LINE L1 0 6178 6130 198 143 0 0 chr5 112248615 112248650 -90836882 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 330 391 0 9 chr5 112248654 112248764 -90836768 - L2 LINE L2 -1 3271 3163 202 296 42 14 chr5 112249218 112249289 -90836243 - L2 LINE L2 0 3313 3241 513 242 86 19 chr5 112249677 112249933 -90835599 - L1M4 LINE L1 -3764 2382 2110 333 345 36 31 chr5 112250100 112250294 -90835238 - L1ME LINE L1 -419 5702 5508 8907 32 5 0 chr5 112250310 112252156 -90833376 - L1PA4 LINE L1 -2 6153 4301 35 54 0 0 chr5 112252571 112252627 -90832905 + AT_rich Low_complexity Low_complexity 1 56 0 13116 60 2 6 chr5 112252954 112254646 -90830886 - L1P LINE L1 -3771 2375 690 11195 50 7 4 chr5 112254642 112256106 -90829426 + L1P LINE L1 2360 3827 -2319 * 2183 78 0 7 chr5 112256459 112256787 -90828745 - AluY SINE Alu 0 329 4 524 237 115 0 chr5 112258394 112258533 -90826999 - MIR SINE MIR -20 242 88 3531 196 32 7 chr5 112259940 112260630 -90824902 - MER39 LTR ERV1 0 707 1 272 322 122 24 chr5 112260753 112260958 -90824574 - MIR SINE MIR -6 256 32 805 259 60 81 chr5 112261100 112261491 -90824041 - MER34 LTR ERV1 -23 519 140 2056 158 61 17 chr5 112261491 112261901 -90823631 + MSTA LTR MaLR 1 428 0 805 259 60 81 chr5 112261901 112262039 -90823493 - MER34 LTR ERV1 -402 140 1 987 228 34 62 chr5 112262297 112262652 -90822880 + L1ME1 LINE L1 5725 6069 -97 462 18 0 0 chr5 112262678 112262733 -90822799 + (TG)n Simple_repeat Simple_repeat 2 56 0 304 143 196 0 chr5 112262834 112262890 -90822642 - MER89 LTR ERV1 -73 486 420 34 42 0 0 chr5 112262890 112262938 -90822594 + AT_rich Low_complexity Low_complexity 1 48 0 2401 25 0 0 chr5 112263179 112263459 -90822073 - L1PA3 LINE L1 0 6155 5876 4594 19 0 0 chr5 112263459 112263986 -90821546 + L1PA3 LINE L1 5335 5861 -294 258 386 35 7 chr5 112264930 112265075 -90820457 + MIR SINE MIR 19 167 -95 750 245 33 28 chr5 112265084 112265296 -90820236 - MIR SINE MIR -10 252 40 23 0 0 0 chr5 112266769 112266792 -90818740 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr5 112266909 112266942 -90818590 + (TG)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr5 112268323 112268349 -90817183 + AT_rich Low_complexity Low_complexity 1 26 0 2436 211 71 22 chr5 112268392 112268677 -90816855 + MER77 LTR ERV1 1 271 -334 2469 72 0 3 chr5 112268677 112268982 -90816550 + AluY SINE Alu 1 304 -7 2436 211 71 22 chr5 112268982 112269273 -90816259 + MER77 LTR ERV1 271 605 0 24 0 0 0 chr5 112269984 112270008 -90815524 + AT_rich Low_complexity Low_complexity 1 24 0 1653 238 81 33 chr5 112270111 112270652 -90814880 - MLT1F1 LTR MaLR 0 567 1 250 274 144 20 chr5 112270899 112271100 -90814432 - L1MEd LINE L1 -4906 1213 988 1179 213 0 0 chr5 112271400 112271602 -90813930 - LTR47B LTR ERVL 0 443 242 274 350 10 0 chr5 112271702 112271799 -90813733 + L2 LINE L2 573 670 -2644 637 259 95 48 chr5 112272360 112272739 -90812793 + L1ME3 LINE L1 4754 5150 -996 1351 273 117 25 chr5 112272758 112273422 -90812110 + L1ME3 LINE L1 5255 5981 -181 5562 222 50 19 chr5 112273425 112274308 -90811224 - L1 LINE L1 -1672 4474 3518 1619 203 0 7 chr5 112274308 112274608 -90810924 - AluJo SINE Alu -10 302 5 5562 222 50 19 chr5 112274608 112275333 -90810199 - L1 LINE L1 -2628 3518 2817 1865 212 26 2 chr5 112275336 112275760 -90809772 + L1MB1 LINE L1 4479 4912 -1234 431 125 9 45 chr5 112275789 112275901 -90809631 + (TA)n Simple_repeat Simple_repeat 1 108 0 1637 211 18 20 chr5 112275906 112276299 -90809233 + L1MB1 LINE L1 5771 6162 -6 211 216 0 0 chr5 112276485 112276522 -90809010 + (TATG)n Simple_repeat Simple_repeat 4 40 0 22 56 0 0 chr5 112276644 112276680 -90808852 + AT_rich Low_complexity Low_complexity 1 36 0 1563 208 69 10 chr5 112276681 112277089 -90808443 - L1MC/D LINE L1 -466 5845 5414 1308 237 75 71 chr5 112277085 112277608 -90807924 + L1MD2 LINE L1 5816 6340 -19 * 29 70 0 0 chr5 112278272 112278329 -90807203 + AT_rich Low_complexity Low_complexity 1 57 0 348 64 0 0 chr5 112278568 112278615 -90806917 + (TA)n Simple_repeat Simple_repeat 2 48 0 736 263 25 32 chr5 112279073 112279358 -90806174 - L1MC/D LINE L1 -2400 3815 3533 479 355 111 43 chr5 112280103 112280861 -90804671 - L2 LINE L2 -954 2360 1552 28 29 0 0 chr5 112281669 112281704 -90803828 + AT_rich Low_complexity Low_complexity 1 35 0 339 287 27 27 chr5 112282117 112282267 -90803265 - L1MC/D LINE L1 -4534 1862 1713 328 321 51 69 chr5 112282269 112282602 -90802930 - HAL1 LINE L1 -1219 1288 962 18796 98 5 2 chr5 112282644 112285372 -90800160 - L1P LINE L1 -978 5168 2432 3005 93 2 0 chr5 112285368 112285764 -90799768 - L1P3 LINE L1 -6061 400 4 * 1791 160 17 130 chr5 112285764 112286240 -90799292 + LTR38B LTR ERV1 189 610 0 1459 271 27 0 chr5 112286729 112287132 -90798400 + L1ME LINE L1 5333 5746 -420 348 267 33 73 chr5 112287238 112287388 -90798144 - MIR SINE MIR 0 262 119 1671 228 41 43 chr5 112287665 112288104 -90797428 + LTR47B LTR ERVL 1 438 -5 306 318 41 94 chr5 112289635 112289953 -90795579 + LTR57-int LTR ERVL 1494 1794 -4253 1055 333 33 31 chr5 112290166 112290712 -90794820 + LTR57-int LTR ERVL 1851 2397 -2946 279 286 322 38 chr5 112290719 112290875 -90794657 - MER52A LTR ERV1 -5 1750 1640 2872 80 3 5 chr5 112290875 112291251 -90794281 - THE1C LTR MaLR 0 375 1 279 286 322 38 chr5 112291251 112291520 -90794012 - MER52A LTR ERV1 -115 1640 1204 * 1015 238 256 58 chr5 112291498 112292124 -90793408 - LTR28 LTR ERV1 -270 750 1 1894 132 0 0 chr5 112292194 112292451 -90793081 + AluSx SINE Alu 20 276 -36 2413 97 0 0 chr5 112293550 112293859 -90791673 + AluSc SINE Alu 1 309 0 478 309 54 22 chr5 112294133 112294453 -90791079 + LTR57-int LTR ERVL 3801 4669 -985 272 228 0 63 chr5 112295243 112295322 -90790210 + MER4-int LTR ERV1 4185 4258 -2340 1999 54 0 4 chr5 112295468 112295707 -90789825 + AluY SINE Alu 53 290 -21 1034 165 43 0 chr5 112295867 112296055 -90789477 - L1PA13 LINE L1 0 6163 5968 238 318 114 42 chr5 112296127 112296363 -90789169 + MIR SINE MIR 10 262 0 38 22 0 0 chr5 112296736 112296781 -90788751 + AT_rich Low_complexity Low_complexity 1 45 0 237 159 0 0 chr5 112296782 112296826 -90788706 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 112297154 112297175 -90788357 + AT_rich Low_complexity Low_complexity 1 21 0 11645 100 2 1 chr5 112297384 112298961 -90786571 + THE1A-int LTR MaLR 2 1580 0 1994 112 19 70 chr5 112298961 112299335 -90786197 + THE1A LTR MaLR 1 355 0 12857 34 2 2 chr5 112299388 112301710 -90783822 + L1PA4 LINE L1 3832 6152 -3 5608 217 122 73 chr5 112301870 112302217 -90783315 + L1MDa LINE L1 17 346 -6194 1840 152 37 35 chr5 112302217 112302591 -90782941 - THE1C LTR MaLR 0 375 1 5608 217 122 73 chr5 112302591 112304111 -90781421 + L1MDa LINE L1 346 2054 -4486 273 143 0 0 chr5 112304111 112304153 -90781379 - MLT1E2 LTR MaLR -535 91 50 5608 217 122 73 chr5 112304153 112304489 -90781043 + L1MDa LINE L1 2054 2372 -4168 26 93 0 0 chr5 112304490 112304565 -90780967 + AT_rich Low_complexity Low_complexity 1 75 0 43 20 0 0 chr5 112304657 112304707 -90780825 + AT_rich Low_complexity Low_complexity 1 50 0 1398 217 39 14 chr5 112304777 112305063 -90780469 + AluJo SINE Alu 1 293 -19 1969 126 0 0 chr5 112305068 112305338 -90780194 + AluSg SINE Alu 1 270 -40 429 36 0 0 chr5 112305338 112305393 -90780139 + (TC)n Simple_repeat Simple_repeat 2 56 0 376 223 25 0 chr5 112305414 112305535 -90779997 - L1M4 LINE L1 -1720 4426 4303 227 217 22 0 chr5 112305742 112305788 -90779744 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 775 363 22 49 chr5 112305788 112306240 -90779292 + L1MD1 LINE L1 396 835 -6234 1272 270 51 11 chr5 112306260 112306871 -90778661 + L1M3 LINE L1 4065 4699 -1447 275 214 0 18 chr5 112306872 112306928 -90778604 + L1MD1 LINE L1 960 1014 -6084 2202 282 63 29 chr5 112307695 112309226 -90776306 + L1MD1 LINE L1 1491 2777 -4390 305 153 0 0 chr5 112309227 112309286 -90776246 + L1MA4 LINE L1 6147 6205 -95 800 244 10 10 chr5 112309286 112309479 -90776053 + MLT1A1 LTR MaLR 171 363 -2 8099 204 36 26 chr5 112309505 112313724 -90771808 + L1MA8 LINE L1 3293 7542 -168 1579 166 17 42 chr5 112313724 112314036 -90771496 - AluJo SINE Alu 0 305 1 8099 204 36 26 chr5 112314036 112314187 -90771345 + L1MA8 LINE L1 7542 7690 -20 930 256 100 4 chr5 112314227 112314783 -90770749 + L1M3 LINE L1 4715 5379 -801 266 0 29 0 chr5 112314783 112314817 -90770715 + (TA)n Simple_repeat Simple_repeat 1 35 0 930 256 100 4 chr5 112314817 112314891 -90770641 + L1M3 LINE L1 5379 5445 -735 * 2846 238 68 50 chr5 112314885 112316500 -90769032 + L1MD1 LINE L1 4836 6493 -743 193 128 43 0 chr5 112316500 112316547 -90768985 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 401 239 11 23 chr5 112316575 112316663 -90768869 + MER21B LTR ERV1 1 87 -776 806 251 33 24 chr5 112316720 112316931 -90768601 + MER21B LTR ERV1 98 310 -553 992 241 71 47 chr5 112316935 112317177 -90768355 + MER21B LTR ERV1 459 713 -150 252 0 0 0 chr5 112317177 112317205 -90768327 + (AATTG)n Simple_repeat Simple_repeat 2 29 0 992 241 71 47 chr5 112317205 112317302 -90768230 + MER21B LTR ERV1 713 806 -57 282 132 0 0 chr5 112317328 112317381 -90768151 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1443 187 49 94 chr5 112317385 112317851 -90767681 + L1MD1 LINE L1 6510 6954 -309 1110 224 21 0 chr5 112318210 112318447 -90767085 - MER54A LTR ERVL 0 901 660 1081 122 84 142 chr5 112319172 112319624 -90765908 + MSTA LTR MaLR 3 428 0 204 188 0 0 chr5 112319786 112319855 -90765677 + CT-rich Low_complexity Low_complexity 2 70 0 2057 224 119 15 chr5 112319994 112320606 -90764926 + L1MDa LINE L1 737 1412 -5128 421 171 0 24 chr5 112320628 112320710 -90764822 + MER66B LTR ERV1 407 486 0 1561 248 70 44 chr5 112322442 112322943 -90762589 + LTR55 LTR ERV 4 517 -31 26 30 0 0 chr5 112323098 112323131 -90762401 + AT_rich Low_complexity Low_complexity 1 33 0 457 228 176 7 chr5 112324956 112325092 -90760440 - MIR SINE MIR -71 191 33 427 111 97 0 chr5 112325463 112325535 -90759997 + MLT1J2 LTR MaLR 354 432 -18 2238 118 3 9 chr5 112327587 112327934 -90757598 + L1PB4 LINE L1 5447 5791 -365 216 163 0 0 chr5 112327934 112327977 -90757555 + (TA)n Simple_repeat Simple_repeat 1 43 0 2009 172 11 3 chr5 112327991 112328345 -90757187 + L1PB4 LINE L1 5796 6152 -4 1487 170 21 4 chr5 112328365 112328606 -90756926 - MSTB LTR MaLR 0 426 182 1432 194 21 24 chr5 112329440 112329822 -90755710 + L1 LINE L1 4487 4867 -1279 372 346 68 5 chr5 112331278 112331483 -90754049 - L3b LINE CR1 -78 1505 1288 228 365 104 0 chr5 112331497 112331593 -90753939 + L2 LINE L2 3167 3272 0 633 223 44 123 chr5 112331673 112332014 -90753518 + MER46C DNA MER2_type 8 321 -17 299 277 47 47 chr5 112332899 112333152 -90752380 + L1ME4a LINE L1 5295 5547 -617 296 155 43 35 chr5 112333201 112333317 -90752215 + (TA)n Simple_repeat Simple_repeat 1 117 0 216 0 0 0 chr5 112333328 112333352 -90752180 + (CA)n Simple_repeat Simple_repeat 2 25 0 377 258 126 14 chr5 112333352 112333584 -90751948 + L1ME4a LINE L1 5598 5857 -264 446 338 54 18 chr5 112335148 112335370 -90750162 + L2 LINE L2 2129 2358 -956 324 351 16 37 chr5 112335399 112335587 -90749945 + L2 LINE L2 2521 2704 -610 533 261 37 0 chr5 112335716 112335877 -90749655 - L2 LINE L2 -1410 1904 1738 960 159 16 11 chr5 112336038 112336220 -90749312 + LTR2 LTR ERV1 267 449 0 2119 114 3 29 chr5 112338458 112338773 -90746759 - AluSq SINE Alu -6 307 1 396 310 48 7 chr5 112340937 112341082 -90744450 + MIR SINE MIR 102 252 -10 1450 152 51 87 chr5 112341207 112341596 -90743936 + THE1C LTR MaLR 1 375 0 2084 280 47 38 chr5 112341597 112342458 -90743074 - L1MC4 LINE L1 -442 7600 6733 27 87 0 0 chr5 112342998 112343067 -90742465 + AT_rich Low_complexity Low_complexity 1 69 0 200 224 0 20 chr5 112343073 112343122 -90742410 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 5214 159 18 19 chr5 112344293 112345285 -90740247 - L1MA4A LINE L1 0 6303 5313 2172 106 14 17 chr5 112345428 112345778 -90739754 - THE1C LTR MaLR -26 349 1 2045 74 13 58 chr5 112346170 112346482 -90739050 - AluSc SINE Alu -11 298 1 979 97 0 0 chr5 112346482 112346606 -90738926 - AluSg1 SINE Alu -182 127 4 960 231 89 14 chr5 112347037 112347092 -90738440 + LTR16A1 LTR ERVL 1 50 -407 1284 216 26 92 chr5 112347092 112347592 -90737940 + MLT1C LTR MaLR 1 467 0 960 231 89 14 chr5 112347592 112347881 -90737651 + LTR16A1 LTR ERVL 50 457 0 202 262 0 0 chr5 112348122 112348164 -90737368 + (TA)n Simple_repeat Simple_repeat 1 42 0 195 42 0 0 chr5 112348185 112348209 -90737323 + (TA)n Simple_repeat Simple_repeat 1 24 0 2319 107 3 8 chr5 112348270 112348625 -90736907 + L1PA13 LINE L1 5793 6145 -18 650 269 50 83 chr5 112348625 112348713 -90736819 - L2 LINE L2 -777 2537 2448 878 227 20 5 chr5 112348713 112348916 -90736616 + MER3 DNA MER1_type 2 207 -2 650 269 50 83 chr5 112348916 112349225 -90736307 - L2 LINE L2 -866 2448 2153 1502 123 23 0 chr5 112349279 112349499 -90736033 - AluSg/x SINE Alu -4 308 84 449 147 127 13 chr5 112350515 112350672 -90734860 - AluSg/x SINE Alu -25 284 110 1897 155 0 3 chr5 112351412 112351715 -90733817 - AluJb SINE Alu -10 302 1 221 359 97 28 chr5 112351720 112351937 -90733595 + L2 LINE L2 2828 3059 -213 570 67 0 0 chr5 112352643 112352718 -90732814 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 23 33 0 0 chr5 112353349 112353379 -90732153 + AT_rich Low_complexity Low_complexity 1 30 0 2409 58 7 0 chr5 112353389 112353683 -90731849 + AluY SINE Alu 1 296 -15 23 0 0 0 chr5 112354545 112354568 -90730964 + AT_rich Low_complexity Low_complexity 1 23 0 571 265 13 0 chr5 112354781 112354932 -90730600 - MLT1L LTR MaLR -32 583 431 338 274 204 47 chr5 112355021 112355276 -90730256 - MLT1L LTR MaLR -301 314 20 320 154 19 66 chr5 112355585 112355909 -90729623 + (TA)n Simple_repeat Simple_repeat 1 308 0 1345 171 65 3 chr5 112355911 112356221 -90729311 - L1MA8 LINE L1 -2 6289 5961 2264 112 0 0 chr5 112356492 112356797 -90728735 + AluSx SINE Alu 3 307 -5 345 308 15 0 chr5 112357489 112357619 -90727913 + L1M4 LINE L1 4093 4224 -1922 6702 40 5 3 chr5 112357623 112358479 -90727053 + L1PA5 LINE L1 5223 6080 -74 3007 183 20 34 chr5 112358598 112359785 -90725747 + L1MA3 LINE L1 4898 6043 -262 1522 222 55 8 chr5 112359529 112359890 -90725642 + L1PB4 LINE L1 5776 6153 -3 * 22 0 0 0 chr5 112361031 112361053 -90724479 + AT_rich Low_complexity Low_complexity 1 22 0 2037 112 10 14 chr5 112361106 112361400 -90724132 - AluSx SINE Alu -19 293 1 245 316 50 36 chr5 112361588 112361727 -90723805 - L3 LINE CR1 -183 1394 1254 197 329 25 13 chr5 112361747 112361826 -90723706 - MIR3 SINE MIR -23 185 106 23 0 0 0 chr5 112362056 112362079 -90723453 + AT_rich Low_complexity Low_complexity 1 23 0 2339 127 32 0 chr5 112362345 112362746 -90722786 - L1PA15 LINE L1 -306 5859 5446 24 0 0 0 chr5 112362817 112362841 -90722691 + AT_rich Low_complexity Low_complexity 1 24 0 194 79 0 26 chr5 112362918 112362956 -90722576 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 1601 232 121 6 chr5 112363155 112363868 -90721664 - L1ME2 LINE L1 -127 6037 5239 6366 49 11 1 chr5 112363888 112364745 -90720787 - L1PA4 LINE L1 -4 6151 5287 1521 205 40 0 chr5 112365018 112365340 -90720192 - Harlequin LTR ERV1 -3 6893 6559 7843 136 2 0 chr5 112365343 112366547 -90718985 - Harlequin LTR ERV1 -2073 5740 4535 1350 153 5 0 chr5 112366547 112366769 -90718763 - Harlequin LTR ERV1 -3559 4254 4032 233 239 34 23 chr5 112367005 112367093 -90718439 - MLT2E LTR ERVL -34 594 506 2436 71 0 0 chr5 112367813 112368124 -90717408 + AluY SINE Alu 1 311 0 189 296 113 70 chr5 112368131 112368246 -90717286 - L2 LINE L2 -17 3255 3136 417 277 6 36 chr5 112368359 112368525 -90717007 + LTR2 LTR ERV1 3 163 -286 694 224 11 11 chr5 112368529 112368712 -90716820 + LTR2 LTR ERV1 267 449 0 1935 146 13 28 chr5 112368712 112369110 -90716422 + Harlequin LTR ERV1 1 392 -6504 398 155 19 19 chr5 112369472 112369575 -90715957 - L1 LINE L1 -1640 4506 4404 23 92 0 0 chr5 112370110 112370175 -90715357 + AT_rich Low_complexity Low_complexity 1 65 0 278 289 93 0 chr5 112370238 112370335 -90715197 - MIR SINE MIR -75 187 82 256 363 134 23 chr5 112370578 112370749 -90714783 - MIR SINE MIR -70 192 3 527 71 14 0 chr5 112371804 112371874 -90713658 + AluSp SINE Alu 67 137 -176 7303 54 122 6 chr5 112371874 112372941 -90712591 + L1P LINE L1 1 1191 -4955 6354 137 8 5 chr5 112373080 112374102 -90711430 - HERVE LTR ERV1 -3788 4025 3001 1654 118 8 0 chr5 112374089 112374335 -90711197 - HERVE LTR ERV1 -6935 878 631 * 4707 102 129 134 chr5 112374337 112375849 -90709683 - pTR5 LTR ERV1 0 2438 741 27 29 0 0 chr5 112377830 112377864 -90707668 + AT_rich Low_complexity Low_complexity 1 34 0 1794 84 10 71 chr5 112377987 112378129 -90707403 + AluSx SINE Alu 1 115 -197 2048 138 0 0 chr5 112378129 112378425 -90707107 + AluSx SINE Alu 1 296 -16 1794 84 10 71 chr5 112378425 112378591 -90706941 + AluSx SINE Alu 115 290 -22 2179 117 0 9 chr5 112380212 112380528 -90705004 + AluSq SINE Alu 1 313 0 469 195 153 9 chr5 112381837 112381991 -90703541 + MSTB1 LTR MaLR 1 199 -231 610 176 92 0 chr5 112381991 112382110 -90703422 + FLAM_C SINE Alu 1 130 -13 1106 153 53 18 chr5 112382114 112382342 -90703190 + MSTB1 LTR MaLR 197 432 0 464 309 243 10 chr5 112383313 112384114 -90701418 - L2 LINE L2 -3 3310 2309 245 318 32 16 chr5 112384174 112384300 -90701232 - L1ME LINE L1 -475 5646 5519 2118 109 0 50 chr5 112384483 112384805 -90700727 + AluSg SINE Alu 1 306 -4 26 74 0 0 chr5 112385235 112385289 -90700243 + AT_rich Low_complexity Low_complexity 1 54 0 2192 111 0 7 chr5 112386752 112387059 -90698473 + AluSx SINE Alu 1 305 -7 405 123 0 0 chr5 112387065 112387130 -90698402 + (TG)n Simple_repeat Simple_repeat 2 66 0 287 278 42 14 chr5 112387177 112387249 -90698283 - MER5A DNA MER1_type -73 116 43 252 146 0 0 chr5 112387413 112387454 -90698078 + Alu SINE Alu 247 287 -13 459 113 0 0 chr5 112387473 112387544 -90697988 + (TG)n Simple_repeat Simple_repeat 2 72 0 287 278 42 14 chr5 112387591 112387663 -90697869 - MER5A DNA MER1_type -73 116 43 235 304 0 0 chr5 112388383 112388439 -90697093 + L2 LINE L2 3250 3305 -8 180 261 225 27 chr5 112389421 112389532 -90696000 + MIR SINE MIR 122 254 -8 221 232 0 80 chr5 112389928 112390066 -90695466 + (CATA)n Simple_repeat Simple_repeat 2 128 0 23 33 0 0 chr5 112390237 112390267 -90695265 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 112390496 112390533 -90694999 + AT_rich Low_complexity Low_complexity 1 37 0 7697 224 51 34 chr5 112390579 112391844 -90693688 - L1MD1 LINE L1 -326 6310 5068 1673 129 134 38 chr5 112391844 112392186 -90693346 + THE1C LTR MaLR 1 375 0 7697 224 51 34 chr5 112392186 112393374 -90692158 - L1MD1 LINE L1 -1568 5068 3901 583 90 0 0 chr5 112393374 112393452 -90692080 + MADE1 DNA Mariner 1 78 -2 7697 224 51 34 chr5 112393452 112394967 -90690565 - L1MD1 LINE L1 -2735 3901 2297 2314 255 112 22 chr5 112394960 112395767 -90689765 - L1MD1 LINE L1 -5498 1042 164 * 345 321 55 44 chr5 112395863 112396156 -90689376 + ERVL LTR ERVL 4900 5195 -569 568 121 0 22 chr5 112396607 112396698 -90688834 + MER4A LTR ERV1 576 664 0 543 207 0 87 chr5 112396698 112396848 -90688684 - MLT1A1 LTR MaLR -228 137 1 4144 206 85 17 chr5 112396848 112397928 -90687604 + L1M4b LINE L1 485 1638 -5221 243 287 59 10 chr5 112398242 112398343 -90687189 - MIR SINE MIR -1 261 156 7825 95 99 83 chr5 112400296 112401966 -90683566 + pTR5 LTR ERV1 741 2438 0 2209 127 0 10 chr5 112402268 112402582 -90682950 + AluSx SINE Alu 1 311 -1 6010 91 27 1 chr5 112404321 112405309 -90680223 + L1PA13 LINE L1 4294 5337 -826 228 35 0 0 chr5 112405309 112405338 -90680194 + (CA)n Simple_repeat Simple_repeat 2 30 0 6010 91 27 1 chr5 112405338 112406183 -90679349 + L1PA13 LINE L1 5337 6158 -5 437 291 0 27 chr5 112407253 112407401 -90678131 + MLT1H LTR MaLR 1 144 -405 424 294 49 0 chr5 112407578 112407721 -90677811 + MLT1H LTR MaLR 400 549 0 24456 54 10 3 chr5 112407754 112408184 -90677348 + L1PA4 LINE L1 2309 2734 -4232 2036 133 0 26 chr5 112408184 112408492 -90677040 + AluSx SINE Alu 3 302 -10 24456 54 10 3 chr5 112408492 112412652 -90672880 + L1PA4 LINE L1 2734 6966 0 1343 223 100 17 chr5 112412670 112413141 -90672391 + L1MC3 LINE L1 7253 7762 -23 26 30 0 0 chr5 112413152 112413185 -90672347 + AT_rich Low_complexity Low_complexity 1 33 0 2014 149 3 0 chr5 112413375 112413671 -90671861 + AluSx SINE Alu 1 297 -15 425 272 39 0 chr5 112413710 112413813 -90671719 + Tigger3(Golem) DNA MER2_type 2 108 -2921 * 1020 143 52 0 chr5 112413810 112414020 -90671512 + Tigger3(Golem) DNA MER2_type 2282 2502 -527 * 1282 165 37 9 chr5 112414018 112414281 -90671251 + AluJb SINE Alu 60 328 0 2594 146 40 47 chr5 112414281 112414764 -90670768 + Tigger3(Golem) DNA MER2_type 2505 2985 -43 221 0 35 0 chr5 112414764 112414793 -90670739 + (ATCTG)n Simple_repeat Simple_repeat 4 33 0 2594 146 40 47 chr5 112414793 112414836 -90670696 + Tigger3(Golem) DNA MER2_type 2985 3027 -1 723 281 119 47 chr5 112414939 112416180 -90669352 + L1ME LINE L1 4457 5728 -442 30 0 0 0 chr5 112416405 112416435 -90669097 + AT_rich Low_complexity Low_complexity 1 30 0 1816 211 28 23 chr5 112416454 112416885 -90668647 + L1MD2 LINE L1 5645 6077 -282 2189 126 22 25 chr5 112416890 112417246 -90668286 + THE1A LTR MaLR 1 355 0 9688 119 20 2 chr5 112417247 112418650 -90666882 + THE1A-int LTR MaLR 2 1429 -151 189 132 0 0 chr5 112418683 112418721 -90666811 + (TG)n Simple_repeat Simple_repeat 2 39 0 1491 154 68 17 chr5 112418765 112419058 -90666474 + L1PB4 LINE L1 5777 6084 -72 498 210 86 43 chr5 112419073 112419352 -90666180 + L1M4 LINE L1 4498 4822 -1324 379 246 27 9 chr5 112419489 112419599 -90665933 + L1ME3A LINE L1 6044 6155 -15 1521 214 45 22 chr5 112419812 112420167 -90665365 - MLT1B LTR MaLR -3 387 25 2164 125 6 10 chr5 112421636 112421948 -90663584 - AluSx SINE Alu -1 311 1 234 200 18 18 chr5 112422066 112422121 -90663411 + CT-rich Low_complexity Low_complexity 1 55 0 2784 3 0 0 chr5 112422597 112422897 -90662635 - AluYa5 SINE Alu -11 300 1 322 317 12 49 chr5 112423103 112423267 -90662265 + L1MC/D LINE L1 5502 5659 -2149 669 131 0 0 chr5 112423326 112423433 -90662099 - L1PA7 LINE L1 0 6154 6048 9997 132 67 18 chr5 112423434 112425512 -90660020 - L1P3 LINE L1 -4284 2177 5 2612 234 25 3 chr5 112425680 112426333 -90659199 + L1M2 LINE L1 4415 5081 -1065 1695 178 103 58 chr5 112426346 112426825 -90658707 - LTR10A LTR ERV1 -61 548 1 1287 156 4 72 chr5 112426825 112427243 -90658289 + L1M2 LINE L1 5078 5467 -743 498 256 8 16 chr5 112427244 112427373 -90658159 - HsTC2 DNA Tc2 -560 1338 1211 2010 140 10 3 chr5 112427385 112427692 -90657840 - AluSx SINE Alu -3 309 1 1829 214 16 5 chr5 112428145 112428514 -90657018 - MLT2C1 LTR ERVL -8 389 17 291 168 69 59 chr5 112428690 112428791 -90656741 - MER113 DNA MER1_type? -415 106 5 1412 247 3 3 chr5 112428912 112429216 -90656316 - MLT1A1 LTR MaLR 0 365 62 2111 130 75 20 chr5 112429358 112429703 -90655829 + THE1B LTR MaLR 1 364 0 481 313 48 24 chr5 112429785 112430034 -90655498 - L2 LINE L2 -1776 1538 1284 270 335 95 13 chr5 112430032 112430190 -90655342 + L2 LINE L2 1486 1656 -1658 * 616 337 42 0 chr5 112430194 112430384 -90655148 - L2 LINE L2 -2049 1265 1068 255 31 0 0 chr5 112430467 112430499 -90655033 + (CA)n Simple_repeat Simple_repeat 1 32 0 947 192 61 14 chr5 112431469 112431683 -90653849 - MER58A DNA MER1_type 0 224 1 9843 83 3 22 chr5 112432650 112434836 -90650696 - L1PA6 LINE L1 -8 6461 4304 1251 117 0 0 chr5 112434837 112435025 -90650507 - L1PA6 LINE L1 -3940 2521 2334 40299 36 27 1 chr5 112435028 112439982 -90645550 + L1P LINE L1 3 5083 -1063 3269 13 0 0 chr5 112439980 112440352 -90645180 + L1HS LINE L1 5784 6155 0 * 324 0 0 0 chr5 112440355 112440391 -90645141 + (A)n Simple_repeat Simple_repeat 1 36 0 6824 163 33 45 chr5 112440391 112442614 -90642918 - L1PA6 LINE L1 -4116 2345 326 21 36 0 0 chr5 112443435 112443463 -90642069 + AT_rich Low_complexity Low_complexity 1 28 0 1157 99 0 0 chr5 112444684 112444845 -90640687 - HERVFH19I LTR ERV1 -82 7637 7477 199 300 191 18 chr5 112445265 112445375 -90640157 + MIR SINE MIR 102 230 -32 2318 123 173 5 chr5 112446350 112446766 -90638766 - LTR19A LTR ERV1 0 486 1 2986 80 3 0 chr5 112446766 112447155 -90638377 - HERVFH19I LTR ERV1 0 7719 7330 447 135 14 0 chr5 112447557 112447631 -90637901 - MADE1 DNA Mariner 0 80 6 5459 190 46 82 chr5 112447981 112448590 -90636942 + L1MA9 LINE L1 2994 3623 -2523 10068 129 19 0 chr5 112448590 112450942 -90634590 + L1PA10 LINE L1 3779 6157 -11 5459 190 46 82 chr5 112450942 112451733 -90633799 + L1MA9 LINE L1 3623 4326 -1820 1891 149 7 29 chr5 112451733 112452041 -90633491 - AluSx SINE Alu -11 301 1 5459 190 46 82 chr5 112452041 112452342 -90633190 + L1MA9 LINE L1 4326 4636 -1510 3641 30 0 0 chr5 112452342 112452771 -90632761 - L1PA2 LINE L1 -2316 3830 3402 13125 30 0 0 chr5 112452771 112455111 -90630421 + L1PA2 LINE L1 3813 6153 -2 3000 203 12 8 chr5 112455111 112455761 -90629771 + L1MA9 LINE L1 4624 5276 -870 1868 164 0 0 chr5 112455762 112456049 -90629483 + AluSx SINE Alu 1 287 -25 213 274 0 0 chr5 112456071 112456155 -90629377 + (TA)n Simple_repeat Simple_repeat 2 85 0 4473 171 15 17 chr5 112456155 112457042 -90628490 + L1MA9 LINE L1 5266 6150 -162 237 65 0 0 chr5 112457044 112457075 -90628457 + (CA)n Simple_repeat Simple_repeat 2 32 0 369 244 49 87 chr5 112458442 112458708 -90626824 - HAL1 LINE L1 0 2507 2252 3229 173 54 19 chr5 112458973 112459657 -90625875 - MER67C LTR ERV1 -2 708 1 1866 260 52 11 chr5 112459657 112460191 -90625341 + MER119 DNA MER1_type 28 583 0 1773 120 67 0 chr5 112460266 112460549 -90624983 - AluSg SINE Alu -8 302 1 2532 52 7 0 chr5 112461124 112461431 -90624101 + AluY SINE Alu 1 309 -2 1509 208 55 72 chr5 112462095 112462639 -90622893 + MER67C LTR ERV1 9 514 0 201 333 29 36 chr5 112463155 112463293 -90622239 - L2 LINE L2 -877 2437 2301 1327 171 25 8 chr5 112464106 112464351 -90621181 + Tigger1 DNA MER2_type 1 249 -2169 * 3506 114 13 6 chr5 112464349 112464873 -90620659 - Tigger1 DNA MER2_type -1612 806 279 1099 101 18 101 chr5 112464888 112465162 -90620370 + Tigger1 DNA MER2_type 640 976 -1442 6391 161 14 8 chr5 112465192 112467347 -90618185 - L1PB1 LINE L1 0 6151 3988 1975 119 44 107 chr5 112467348 112467778 -90617754 + Tigger1 DNA MER2_type 961 1363 -1055 4366 150 25 14 chr5 112467780 112468542 -90616990 + Tigger1 DNA MER2_type 1649 2418 0 210 118 0 0 chr5 112469609 112469643 -90615889 + (T)n Simple_repeat Simple_repeat 1 34 0 367 257 217 7 chr5 112469845 112469997 -90615535 + MIR SINE MIR 21 204 -58 855 180 6 0 chr5 112470176 112470337 -90615195 + FRAM SINE Alu 1 160 -16 253 259 0 0 chr5 112471185 112471239 -90614293 + MER5B DNA MER1_type 1 54 -124 233 346 12 0 chr5 112471241 112471322 -90614210 - MER5B DNA MER1_type -86 92 11 207 0 0 0 chr5 112472307 112472330 -90613202 + (TTG)n Simple_repeat Simple_repeat 2 24 0 289 299 55 39 chr5 112472519 112472547 -90612985 - L1MC4a LINE L1 -1053 6755 6729 213 65 0 0 chr5 112472547 112472578 -90612954 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 289 299 55 39 chr5 112472578 112472676 -90612856 - L1MC4a LINE L1 -1079 6729 6627 1694 196 30 45 chr5 112472684 112473154 -90612378 - L1M4 LINE L1 -753 5393 4931 1821 269 62 33 chr5 112473208 112474277 -90611255 - L1M4c LINE L1 -4550 2409 1318 1740 158 10 20 chr5 112474563 112474866 -90610666 - AluJb SINE Alu -2 310 11 369 274 38 70 chr5 112474876 112475062 -90610470 - L1M4c LINE L1 -6668 191 12 1965 214 22 99 chr5 112475120 112475556 -90609976 + MLT1E2 LTR MaLR 1 366 -260 1850 176 111 3 chr5 112475556 112475942 -90609590 - MSTA LTR MaLR 0 428 1 1965 214 22 99 chr5 112475942 112476184 -90609348 + MLT1E2 LTR MaLR 366 625 -1 631 247 50 0 chr5 112476188 112476365 -90609167 + L1MC4a LINE L1 6411 6594 -1191 2046 221 107 12 chr5 112476411 112477072 -90608460 + L1MC4a LINE L1 6772 7495 -313 968 295 29 26 chr5 112477307 112477726 -90607806 + MLT1F1 LTR MaLR 93 556 -11 351 276 48 0 chr5 112477737 112477842 -90607690 + L1MC4a LINE L1 7492 7601 -207 1837 201 133 99 chr5 112477929 112478688 -90606844 - LTR1B LTR ERV1 -39 981 1 495 211 96 80 chr5 112478689 112478888 -90606644 + L1MC4a LINE L1 7606 7807 -1 1838 151 55 19 chr5 112481097 112481422 -90604110 + MER1B DNA MER1_type 1 337 0 509 86 0 12 chr5 112482109 112482190 -90603342 + (TG)n Simple_repeat Simple_repeat 2 81 0 1328 192 3 34 chr5 112482879 112483170 -90602362 + AluJb SINE Alu 18 299 -13 28 29 0 0 chr5 112483863 112483898 -90601634 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 112484186 112484216 -90601316 + AT_rich Low_complexity Low_complexity 1 30 0 219 304 22 0 chr5 112485309 112485401 -90600131 + (TATATG)n Simple_repeat Simple_repeat 3 96 0 514 267 47 27 chr5 112485585 112485735 -90599797 + MIR3 SINE MIR 23 175 -33 3627 189 31 10 chr5 112486561 112487334 -90598198 + L1 LINE L1 3898 4686 -1460 8892 112 31 3 chr5 112487370 112489444 -90596088 + L1M1 LINE L1 79 2337 -5228 2117 117 0 10 chr5 112489444 112489744 -90595788 + AluSx SINE Alu 1 297 -15 8892 112 31 3 chr5 112489744 112490737 -90594795 + L1M1 LINE L1 2337 3301 -4264 5964 208 40 1 chr5 112490737 112492098 -90593434 + L1M1 LINE L1 3551 4965 -2600 303 83 0 0 chr5 112492124 112492172 -90593360 + L1PA13 LINE L1 6112 6159 -4 216 0 0 0 chr5 112493459 112493483 -90592049 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr5 112493988 112494010 -90591522 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 112494507 112494556 -90590976 + AT_rich Low_complexity Low_complexity 1 49 0 1215 179 30 17 chr5 112494674 112494908 -90590624 - MER8 DNA MER2_type -1 238 2 208 237 31 82 chr5 112495445 112495542 -90589990 - L2 LINE L2 -79 3234 3143 501 250 104 0 chr5 112495588 112495732 -90589800 - MER20 DNA MER1_type -28 191 33 256 315 33 22 chr5 112495743 112495835 -90589697 - MIR3 SINE MIR -18 190 98 402 331 64 81 chr5 112495965 112496249 -90589283 - L2 LINE L2 0 3272 2998 2008 117 11 0 chr5 112496249 112496531 -90589001 + AluSx SINE Alu 6 290 -22 402 331 64 81 chr5 112496531 112496714 -90588818 - L2 LINE L2 -274 2998 2813 896 155 0 0 chr5 112497013 112497142 -90588390 + FRAM SINE Alu 33 161 -15 410 199 22 39 chr5 112497517 112497698 -90587834 + GA-rich Low_complexity Low_complexity 2 179 0 32 75 0 0 chr5 112498388 112498455 -90587077 + AT_rich Low_complexity Low_complexity 1 67 0 28 42 0 56 chr5 112498841 112498892 -90586640 + AT_rich Low_complexity Low_complexity 1 48 -20 1677 148 24 7 chr5 112498892 112499062 -90586470 + L1PA16 LINE L1 5862 6041 -125 2297 102 7 0 chr5 112499062 112499366 -90586166 + AluSx SINE Alu 1 306 -6 1677 148 24 7 chr5 112499366 112499486 -90586046 + L1PA16 LINE L1 6041 6157 -9 28 42 0 56 chr5 112499486 112499506 -90586026 + AT_rich Low_complexity Low_complexity 48 68 0 1363 200 43 40 chr5 112499751 112500076 -90585456 + Tigger1 DNA MER2_type 1 326 -2092 * 2229 148 3 19 chr5 112500074 112500439 -90585093 + Tigger1 DNA MER2_type 2060 2418 0 2008 141 7 0 chr5 112501459 112501764 -90583768 + AluSx SINE Alu 1 307 -5 190 368 26 0 chr5 112502389 112502465 -90583067 + L2 LINE L2 3191 3268 -4 1349 168 0 5 chr5 112503154 112503374 -90582158 - AluJb SINE Alu -12 300 82 206 32 32 0 chr5 112504281 112504312 -90581220 + (CA)n Simple_repeat Simple_repeat 2 33 0 33 0 0 0 chr5 112504397 112504430 -90581102 + AT_rich Low_complexity Low_complexity 1 33 0 346 353 86 25 chr5 112504440 112504718 -90580814 + HAL1b LINE L1 240 534 -814 244 208 0 0 chr5 112505538 112505591 -90579941 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 256 12 0 chr5 112505592 112505678 -90579854 + (TA)n Simple_repeat Simple_repeat 1 87 0 198 103 0 0 chr5 112505683 112505712 -90579820 + (TG)n Simple_repeat Simple_repeat 1 29 0 339 29 87 0 chr5 112505866 112505935 -90579597 + (TA)n Simple_repeat Simple_repeat 1 75 0 2178 121 3 0 chr5 112506666 112506973 -90578559 + AluSx SINE Alu 1 308 -4 901 188 19 0 chr5 112508015 112508169 -90577363 - AluJo/FRAM SINE Alu -9 293 137 419 241 0 4 chr5 112508169 112508254 -90577278 - AluJ/FLAM SINE Alu -233 69 1 263 289 0 88 chr5 112508649 112508763 -90576769 + MIR SINE MIR 159 262 0 28 48 0 0 chr5 112508983 112509025 -90576507 + AT_rich Low_complexity Low_complexity 1 42 0 3050 170 18 13 chr5 112510025 112510626 -90574906 - L1MA5 LINE L1 -5 6997 6394 14030 203 32 25 chr5 112510632 112511905 -90573627 - L1MA5 LINE L1 -769 6079 4816 2324 115 0 0 chr5 112511905 112512218 -90573314 + AluSq SINE Alu 1 313 0 14030 203 32 25 chr5 112512218 112515545 -90569987 - L1MA5 LINE L1 -2032 4816 1438 33 25 0 0 chr5 112516843 112516883 -90568649 + AT_rich Low_complexity Low_complexity 1 40 0 395 297 154 21 chr5 112516953 112517283 -90568249 - L1MC/D LINE L1 -2136 5672 5299 1876 144 40 3 chr5 112518210 112518508 -90567024 + AluSx SINE Alu 1 309 -3 751 304 72 28 chr5 112518734 112519162 -90566370 + HAL1b LINE L1 96 542 -806 529 167 0 0 chr5 112519450 112519528 -90566004 - MER2 DNA MER2_type 0 345 268 1074 161 31 0 chr5 112519559 112519751 -90565781 - MER2 DNA MER2_type -136 209 12 331 229 31 31 chr5 112519888 112519984 -90565548 - Zaphod DNA AcHobo 0 4031 3936 333 323 74 37 chr5 112522194 112522491 -90563041 - ERVL LTR ERVL -569 5195 4888 1271 139 10 51 chr5 112522623 112522911 -90562621 - MER4A LTR ERV1 -69 595 261 572 144 21 10 chr5 112522911 112523008 -90562524 - MER4A LTR ERV1 -566 98 1 * 982 206 68 14 chr5 112523008 112523226 -90562306 + MLT1A1 LTR MaLR 134 363 -2 1708 266 71 9 chr5 112523229 112523680 -90561852 - L1M4b LINE L1 -6371 488 10 4178 109 58 6 chr5 112523784 112524438 -90561094 - L1PA13 LINE L1 0 6163 5476 * 7139 47 0 0 chr5 112524433 112525578 -90559954 - L1PA6 LINE L1 0 6154 5002 1478 110 64 0 chr5 112525585 112525914 -90559618 - L1PA13 LINE L1 -698 5463 5119 521 283 69 17 chr5 112525925 112526098 -90559434 - MIR SINE MIR -71 191 10 660 314 52 4 chr5 112526105 112526334 -90559198 + MIR SINE MIR 23 262 0 462 256 107 0 chr5 112526670 112526791 -90558741 + HERV16 LTR ERVL 708 841 -4155 1455 234 118 21 chr5 112526792 112527216 -90558316 - MLT1D LTR MaLR 0 505 41 935 191 71 63 chr5 112527207 112527459 -90558073 + MLT1B LTR MaLR 121 374 -16 * 1676 171 151 3 chr5 112527459 112527804 -90557728 + MSTD LTR MaLR 1 396 0 1060 305 49 33 chr5 112528164 112528554 -90556978 + LTR16A LTR ERVL 5 404 -46 2430 47 3 13 chr5 112528554 112528855 -90556677 + AluY SINE Alu 1 298 -13 1060 305 49 33 chr5 112528855 112528893 -90556639 + LTR16A LTR ERVL 404 440 -10 230 120 0 60 chr5 112529008 112529058 -90556474 - L1MA3 LINE L1 -333 5972 5926 37 23 0 0 chr5 112529745 112529789 -90555743 + AT_rich Low_complexity Low_complexity 1 44 0 763 171 47 0 chr5 112529869 112530039 -90555493 + L1MA8 LINE L1 6113 6290 -1 187 353 35 0 chr5 112530980 112531065 -90554467 - L2 LINE L2 0 3313 3226 291 355 128 25 chr5 112531099 112531565 -90553967 - L2 LINE L2 -162 3110 2590 185 344 13 84 chr5 112531692 112531846 -90553686 - L2 LINE L2 -1 3271 3129 413 250 0 0 chr5 112532290 112532374 -90553158 + L1PA15 LINE L1 4548 4631 -1515 5321 137 28 6 chr5 112532417 112533443 -90552089 + L1PA15 LINE L1 5120 6165 0 2120 78 0 0 chr5 112534771 112535054 -90550478 + L1PA14 LINE L1 5870 6152 -9 665 96 0 0 chr5 112535298 112535392 -90550140 - AluY SINE Alu -12 299 206 1581 36 0 0 chr5 112535873 112536067 -90549465 - L1PA4 LINE L1 0 6155 5962 529 105 42 0 chr5 112536314 112536409 -90549123 + L1PA14 LINE L1 6054 6152 -9 665 96 0 0 chr5 112536657 112536751 -90548781 - AluY SINE Alu -12 299 206 1551 36 0 5 chr5 112537232 112537427 -90548105 - L1PA4 LINE L1 0 6155 5962 279 122 0 0 chr5 112537636 112537685 -90547847 + (T)n Simple_repeat Simple_repeat 1 49 0 12744 19 0 0 chr5 112537686 112539953 -90545579 - L1HS LINE L1 -3 6152 3886 17177 20 0 0 chr5 112540053 112542609 -90542923 - L1HS LINE L1 -229 5926 3370 25767 29 1 0 chr5 112542709 112545817 -90539715 + L1P LINE L1 1973 5083 -1063 3228 14 3 0 chr5 112545815 112546186 -90539346 + L1HS LINE L1 5784 6155 0 * 315 0 0 0 chr5 112546188 112546223 -90539309 + (A)n Simple_repeat Simple_repeat 1 35 0 6544 156 14 14 chr5 112546223 112547409 -90538123 - L1P LINE L1 -4115 2031 847 28134 42 41 4 chr5 112547509 112551151 -90534381 - L1P LINE L1 -2371 3775 1 666 122 0 0 chr5 112551366 112551456 -90534076 + 5S rRNA rRNA 1 90 -31 666 320 97 35 chr5 112552960 112553506 -90532026 + L1MCc LINE L1 20 599 -5824 985 221 36 57 chr5 112553544 112554026 -90531506 + L1MC/D LINE L1 5124 5586 -746 6624 178 53 42 chr5 112554064 112554481 -90531051 + L1MCc LINE L1 536 947 -5994 1910 121 3 31 chr5 112554481 112554771 -90530761 + AluSp SINE Alu 1 282 -31 6624 178 53 42 chr5 112554771 112554798 -90530734 + L1MCc LINE L1 947 972 -5969 261 83 0 0 chr5 112554798 112554834 -90530698 + (CA)n Simple_repeat Simple_repeat 2 37 0 6624 178 53 42 chr5 112554834 112555905 -90529627 + L1MCc LINE L1 972 2069 -4872 * 7261 219 38 72 chr5 112555901 112557891 -90527641 + L1MCc LINE L1 3001 4877 -2064 2267 137 8 3 chr5 112557891 112558248 -90527284 - L1PB2 LINE L1 -2 6149 5791 7261 219 38 72 chr5 112558248 112558918 -90526614 + L1MCc LINE L1 4877 5569 -1372 1290 214 26 69 chr5 112558936 112559356 -90526176 + L1MA9 LINE L1 5873 6274 -38 599 269 25 10 chr5 112559374 112559571 -90525961 + L1MC4 LINE L1 7251 7450 -592 311 298 14 7 chr5 112559570 112559711 -90525821 + L1MC4 LINE L1 7751 7892 -150 * 23 33 0 0 chr5 112559750 112559780 -90525752 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 112559897 112559919 -90525613 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 112560046 112560095 -90525437 + AT_rich Low_complexity Low_complexity 1 49 0 197 174 0 22 chr5 112560642 112560688 -90524844 + GA-rich Low_complexity Low_complexity 4 48 0 339 214 43 57 chr5 112561658 112561798 -90523734 + MER113 DNA MER1_type? 9 146 -375 2204 112 0 0 chr5 112561799 112562086 -90523446 + AluSx SINE Alu 1 287 -25 282 299 73 34 chr5 112562278 112562455 -90523077 + MIR SINE MIR 78 261 -1 21 57 0 0 chr5 112562583 112562618 -90522914 + AT_rich Low_complexity Low_complexity 1 35 0 1717 236 109 7 chr5 112563581 112564039 -90521493 - MLT1D LTR MaLR 0 505 1 299 255 85 21 chr5 112564263 112564357 -90521175 - MIR SINE MIR -162 100 1 224 296 0 0 chr5 112564558 112564612 -90520920 + GA-rich Low_complexity Low_complexity 1 54 0 705 320 52 21 chr5 112564704 112564911 -90520621 - HERV16 LTR ERVL -3027 1969 1747 2692 76 3 3 chr5 112564911 112565266 -90520266 - THE1A LTR MaLR 0 355 1 705 320 52 21 chr5 112565266 112565386 -90520146 - HERV16 LTR ERVL -3249 1747 1632 258 228 43 33 chr5 112565614 112565706 -90519826 + L1MD3 LINE L1 7902 7994 -1 1911 149 23 13 chr5 112566036 112566345 -90519187 + AluSx SINE Alu 1 312 0 510 167 0 0 chr5 112566981 112567065 -90518467 + AluJb SINE Alu 205 288 -24 1231 259 21 9 chr5 112567066 112567398 -90518134 - MER63B DNA MER1_type -100 336 1 1503 191 118 21 chr5 112567483 112567865 -90517667 - L1PA12 LINE L1 -7087 494 76 * 8858 37 0 0 chr5 112567864 112568983 -90516549 - L1PA5 LINE L1 -2661 3485 2367 15346 46 9 1 chr5 112568983 112571650 -90513882 + L1PA5 LINE L1 3473 6147 -7 231 188 0 0 chr5 112571671 112571719 -90513813 + (TA)n Simple_repeat Simple_repeat 2 49 0 262 311 0 0 chr5 112571777 112571851 -90513681 - L1MCa LINE L1 -4570 1856 1783 428 195 0 12 chr5 112571879 112571961 -90513571 - L1PA12 LINE L1 -7492 89 9 539 72 0 36 chr5 112573736 112573819 -90511713 - MADE1 DNA Mariner 0 80 1 744 226 13 74 chr5 112573901 112574131 -90511401 + MLT1A1 LTR MaLR 13 228 -137 16421 176 37 13 chr5 112574131 112577195 -90508337 + L1M1 LINE L1 27 3163 -4402 3828 226 48 12 chr5 112577203 112578210 -90507322 + L1M1 LINE L1 3604 4646 -2919 623 224 103 32 chr5 112578210 112578366 -90507166 + MLT1A1 LTR MaLR 206 372 -2 325 289 217 7 chr5 112578875 112579027 -90506505 + MIR3 SINE MIR 19 202 -6 599 251 73 24 chr5 112579916 112580219 -90505313 + L1ME2 LINE L1 5834 6164 0 5466 278 41 11 chr5 112580306 112581435 -90504097 + L1M4b LINE L1 12 1200 -5659 1593 219 64 0 chr5 112581435 112581778 -90503754 + MLT1A1 LTR MaLR 1 365 0 5466 278 41 11 chr5 112581778 112582153 -90503379 + L1M4b LINE L1 1200 1562 -5297 1030 195 49 146 chr5 112582173 112582563 -90502969 + LTR28 LTR ERV1 395 745 -81 22 35 0 0 chr5 112582922 112582951 -90502581 + AT_rich Low_complexity Low_complexity 1 29 0 4487 51 50 2 chr5 112582985 112583967 -90501565 + MER11A LTR ERVK 1 1266 0 24 32 0 0 chr5 112585475 112585506 -90500026 + AT_rich Low_complexity Low_complexity 1 31 0 2598 168 65 8 chr5 112586002 112586526 -90499006 + L1MB4 LINE L1 5589 6142 -38 200 275 0 14 chr5 112586834 112586903 -90498629 + GA-rich Low_complexity Low_complexity 1 68 0 187 250 0 0 chr5 112587061 112587101 -90498431 - L2 LINE L2 -1 3312 3273 22 0 0 0 chr5 112587564 112587586 -90497946 + AT_rich Low_complexity Low_complexity 1 22 0 2652 83 17 0 chr5 112588900 112589249 -90496283 + THE1A LTR MaLR 1 355 0 6567 100 26 2 chr5 112589249 112590170 -90495362 + THE1A-int LTR MaLR 1 943 -637 1581 88 42 0 chr5 112590174 112590389 -90495143 + THE1A LTR MaLR 132 355 0 21 36 0 0 chr5 112590915 112590943 -90494589 + AT_rich Low_complexity Low_complexity 1 28 0 548 259 62 19 chr5 112591953 112592278 -90493254 + L1ME LINE L1 520 858 -5212 280 289 0 13 chr5 112592286 112592362 -90493170 + L1PA13 LINE L1 884 958 -6616 465 323 22 9 chr5 112592402 112592724 -90492808 + L1PA13 LINE L1 2177 2440 -5141 2376 216 29 16 chr5 112592724 112593237 -90492295 + L1M4 LINE L1 22 541 -7024 657 223 18 6 chr5 112593221 112593387 -90492145 + L1ME LINE L1 2391 2558 -3522 * 376 211 211 0 chr5 112593393 112593554 -90491978 + L1M4 LINE L1 3749 3943 -3622 398 391 52 42 chr5 112596572 112596879 -90488653 - L2 LINE L2 -4 3268 2959 447 332 40 35 chr5 112596943 112597142 -90488390 - L2 LINE L2 -494 2820 2621 16405 215 29 20 chr5 112597738 112598520 -90487012 - L1PA15 LINE L1 -5 6820 6047 1678 94 0 0 chr5 112598520 112598732 -90486800 + AluSg/x SINE Alu 84 295 -15 16405 215 29 20 chr5 112598732 112600555 -90484977 - L1PA15 LINE L1 -778 6047 4242 1927 131 87 32 chr5 112600555 112600899 -90484633 + THE1B LTR MaLR 2 364 0 16405 215 29 20 chr5 112600899 112603424 -90482108 - L1PA15 LINE L1 -2583 4242 1534 2060 151 3 0 chr5 112603424 112603729 -90481803 - AluSg SINE Alu -4 306 1 16405 215 29 20 chr5 112603729 112605277 -90480255 - L1PA15 LINE L1 -5291 1534 2 32 26 0 0 chr5 112606813 112606852 -90478680 + AT_rich Low_complexity Low_complexity 1 39 0 872 250 42 9 chr5 112607331 112607547 -90477985 - MLT1J2 LTR MaLR -226 224 2 22 88 0 0 chr5 112608021 112608078 -90477454 + AT_rich Low_complexity Low_complexity 1 57 0 381 260 41 7 chr5 112609086 112609232 -90476300 - MER103 DNA DNA -8 158 8 267 296 84 21 chr5 112609633 112609775 -90475757 + MIR SINE MIR 99 249 -13 21 0 0 0 chr5 112610277 112610298 -90475234 + AT_rich Low_complexity Low_complexity 1 21 0 776 178 7 13 chr5 112611929 112612081 -90473451 - L1PA16 LINE L1 -4 6162 6012 207 0 0 0 chr5 112613687 112613710 -90471822 + (T)n Simple_repeat Simple_repeat 1 23 0 243 272 25 49 chr5 112613906 112613987 -90471545 + L2 LINE L2 3231 3309 -4 347 307 0 0 chr5 112615797 112615885 -90469647 + CT-rich Low_complexity Low_complexity 3 90 0 3429 141 9 2 chr5 112616133 112616694 -90468838 + MER34B LTR ERV1 1 565 0 1042 216 112 54 chr5 112616919 112617580 -90467952 - LTR41 LTR ERVL -9 764 1 34 24 0 0 chr5 112619159 112619200 -90466332 + AT_rich Low_complexity Low_complexity 1 41 0 255 250 13 22 chr5 112620279 112620381 -90465151 - MLT1K LTR MaLR -28 587 482 4661 159 37 35 chr5 112620382 112621250 -90464282 - MER52A LTR ERV1 0 1755 886 3658 170 31 6 chr5 112621351 112622255 -90463277 - L1PA12 LINE L1 -4177 3407 2478 2465 199 4 2 chr5 112622252 112622749 -90462783 + L1P LINE L1 3974 4471 -1675 * 2957 242 64 15 chr5 112622849 112623987 -90461545 - L1PBb LINE L1 -4331 1872 583 580 271 20 68 chr5 112625176 112625427 -90460105 - MIR SINE MIR -20 242 4 301 246 154 31 chr5 112626157 112626287 -90459245 + MER69 DNA AcHobo 1 146 -2380 324 262 113 24 chr5 112626478 112626646 -90458886 - L1M4 LINE L1 -767 5379 5197 233 197 239 14 chr5 112626747 112626818 -90458714 - L1ME3A LINE L1 -5 6165 6079 3000 183 5 38 chr5 112626929 112627735 -90457797 + L1MB1 LINE L1 5063 5844 -324 1700 184 6 0 chr5 112627810 112628126 -90457406 + L1MB1 LINE L1 5831 6148 -20 398 295 142 21 chr5 112628244 112628434 -90457098 + L3 LINE CR1 486 698 -879 2269 166 7 22 chr5 112628808 112629255 -90456277 + L1MA7 LINE L1 5852 6291 0 2652 179 9 51 chr5 112629489 112630042 -90455490 - MER52A LTR ERV1 0 1755 1226 1081 202 40 0 chr5 112630172 112630425 -90455107 + L1 LINE L1 4263 4525 -1621 23 0 0 0 chr5 112631028 112631051 -90454481 + AT_rich Low_complexity Low_complexity 1 23 0 30 27 0 0 chr5 112632377 112632414 -90453118 + AT_rich Low_complexity Low_complexity 1 37 0 690 234 7 0 chr5 112632550 112632704 -90452828 - L1M4 LINE L1 -1355 4791 4637 222 297 178 10 chr5 112632704 112632805 -90452727 - MIR SINE MIR -142 120 3 209 388 31 10 chr5 112633259 112633357 -90452175 + L2 LINE L2 2559 2658 -656 587 311 79 53 chr5 112633677 112634133 -90451399 - MLT1H LTR MaLR 0 549 82 270 225 36 27 chr5 112634146 112634257 -90451275 - L1M4 LINE L1 -2722 3424 3313 439 341 71 0 chr5 112634881 112635063 -90450469 - MIR SINE MIR -31 231 37 241 152 0 0 chr5 112635182 112635228 -90450304 + LTR66 LTR ERVL 394 439 -171 261 244 24 0 chr5 112635228 112635310 -90450222 + L1MC4 LINE L1 6620 6703 -1339 2069 236 34 6 chr5 112635390 112635928 -90449604 - L1MA10 LINE L1 0 6334 5782 312 269 39 19 chr5 112635939 112636043 -90449489 + L1MC4 LINE L1 6614 6719 -1323 312 109 0 55 chr5 112636043 112636098 -90449434 - L1M3 LINE L1 -375 5793 5742 8323 193 33 8 chr5 112636115 112638088 -90447444 + L1M2 LINE L1 3486 5508 -757 437 321 67 53 chr5 112638265 112638940 -90446592 + PABL_B-int LTR ERV1 3506 4077 -3045 648 355 107 23 chr5 112641955 112642808 -90442724 + L2 LINE L2 2388 3312 -1 299 256 68 30 chr5 112642809 112642942 -90442590 + MIR SINE MIR 125 262 0 2184 112 25 33 chr5 112644310 112644677 -90440855 - THE1B LTR MaLR 0 364 1 222 417 46 20 chr5 112644784 112644935 -90440597 - L2 LINE L2 -17 3255 3101 254 341 22 11 chr5 112644956 112645047 -90440485 + MER5B DNA MER1_type 11 102 -76 250 282 0 0 chr5 112645520 112645598 -90439934 + L1MC4 LINE L1 6615 6692 -1350 23 33 0 0 chr5 112645616 112645646 -90439886 + AT_rich Low_complexity Low_complexity 1 30 0 52 41 0 0 chr5 112645675 112645748 -90439784 + AT_rich Low_complexity Low_complexity 1 73 0 198 307 13 13 chr5 112646320 112646395 -90439137 - L2 LINE L2 -19 3294 3220 596 251 0 37 chr5 112646412 112646575 -90438957 - L2 LINE L2 -1023 2291 2135 1874 317 116 5 chr5 112646583 112647440 -90438092 - L2 LINE L2 -2331 983 32 267 276 231 30 chr5 112647857 112647991 -90437541 - MER5A DNA MER1_type 0 189 29 186 43 0 0 chr5 112648556 112648579 -90436953 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 232 232 0 53 chr5 112648855 112648950 -90436582 + L1MC4 LINE L1 6614 6703 -1339 945 179 6 6 chr5 112649014 112649187 -90436345 - FRAM SINE Alu -10 166 1 1434 174 4 0 chr5 112649291 112649538 -90435994 + L1M2 LINE L1 5518 5765 -526 24 0 0 0 chr5 112650622 112650646 -90434886 + AT_rich Low_complexity Low_complexity 1 24 0 1951 130 17 7 chr5 112651534 112651826 -90433706 - AluSg SINE Alu -15 295 1 230 54 0 27 chr5 112652455 112652492 -90433040 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 3814 31 0 0 chr5 112652492 112652765 -90432767 - L1PA4 LINE L1 -24 6131 5859 602 275 46 0 chr5 112652765 112652983 -90432549 - L1MD3 LINE L1 -2137 5858 5631 5516 195 35 6 chr5 112654665 112656100 -90429432 - L1MC1 LINE L1 0 6333 4858 244 349 142 0 chr5 112656714 112656820 -90428712 + MIR3 SINE MIR 70 190 -18 730 82 0 0 chr5 112657962 112658060 -90427472 + L1PB3 LINE L1 6052 6149 -5 570 195 16 0 chr5 112658062 112658190 -90427342 - L1 LINE L1 -844 5302 5173 4112 106 48 3 chr5 112658195 112658845 -90426687 + L1PB2 LINE L1 5467 6145 -6 187 359 20 23 chr5 112658969 112659103 -90426429 + MER5B DNA MER1_type 20 163 -26 319 296 72 36 chr5 112659556 112659779 -90425753 + L2 LINE L2 3013 3243 -70 1379 163 14 0 chr5 112660080 112660326 -90425206 + AluSx SINE Alu 58 306 0 2423 117 0 9 chr5 112660330 112660673 -90424859 - THE1C LTR MaLR -35 340 1 864 232 18 14 chr5 112661475 112661695 -90423837 + L1MB5 LINE L1 3616 3836 -2310 * 1096 173 76 50 chr5 112661691 112661768 -90423764 + L1MB5 LINE L1 5378 5452 -714 2473 48 0 13 chr5 112661768 112662080 -90423452 + AluY SINE Alu 1 308 -3 1096 173 76 50 chr5 112662080 112662279 -90423253 + L1MB5 LINE L1 5452 5661 -505 215 301 39 58 chr5 112662395 112662498 -90423034 - MIR SINE MIR -105 157 57 484 217 25 0 chr5 112662714 112662834 -90422698 - L1MC3 LINE L1 -8 7777 7655 268 274 128 0 chr5 112662859 112662976 -90422556 - L1MCb LINE L1 -5344 701 570 855 296 73 53 chr5 112663057 112663604 -90421928 - L1MCb LINE L1 -5482 563 6 354 296 53 26 chr5 112663634 112663786 -90421746 - L2 LINE L2 0 3313 3158 22 35 0 0 chr5 112664936 112664965 -90420567 + AT_rich Low_complexity Low_complexity 1 29 0 713 167 13 35 chr5 112665363 112665643 -90419889 + L1MB5 LINE L1 5653 5945 -229 216 170 0 64 chr5 112666681 112666728 -90418804 + polypurine Low_complexity Low_complexity 1 44 0 267 240 0 39 chr5 112666932 112667061 -90418471 + CT-rich Low_complexity Low_complexity 2 125 0 22 0 0 0 chr5 112668092 112668114 -90417418 + AT_rich Low_complexity Low_complexity 1 22 0 1519 217 111 10 chr5 112668266 112668681 -90416851 + MER31B LTR ERV1 1 457 -9 198 103 0 0 chr5 112668826 112668855 -90416677 + (A)n Simple_repeat Simple_repeat 1 29 0 192 143 0 0 chr5 112670018 112670046 -90415486 + L3 LINE CR1 1226 1253 -324 185 290 81 16 chr5 112671085 112671147 -90414385 - L2 LINE L2 -641 2673 2608 3700 221 75 23 chr5 112671180 112672300 -90413232 - Charlie1a DNA MER1_type -2 1453 276 1163 130 40 85 chr5 112672300 112672523 -90413009 - AluJo SINE Alu -18 294 82 225 250 0 0 chr5 112672632 112672684 -90412848 - FLAM SINE Alu 0 133 82 1017 263 50 18 chr5 112672686 112672964 -90412568 - Charlie1a DNA MER1_type -1168 287 1 24 0 0 0 chr5 112673416 112673440 -90412092 + AT_rich Low_complexity Low_complexity 1 24 0 1477 156 17 0 chr5 112673440 112673671 -90411861 - Tigger2 DNA MER2_type 0 2718 2484 1708 320 80 7 chr5 112674111 112674849 -90410683 - L2 LINE L2 -511 2803 2012 1269 190 93 11 chr5 112674998 112675267 -90410265 + AluJo SINE Alu 1 291 -11 1663 148 33 7 chr5 112676475 112676745 -90408787 - Tigger2 DNA MER2_type -1974 744 468 * 9955 156 29 28 chr5 112676742 112678542 -90406990 + Tigger2 DNA MER2_type 917 2718 0 2154 102 0 13 chr5 112679012 112679315 -90406217 - AluSg SINE Alu -11 299 1 43 0 0 0 chr5 112679926 112679969 -90405563 + AT_rich Low_complexity Low_complexity 1 43 0 270 0 0 0 chr5 112679997 112680027 -90405505 + (CA)n Simple_repeat Simple_repeat 2 31 0 229 328 0 0 chr5 112680341 112680408 -90405124 - L1 LINE L1 -2004 4142 4076 28 0 0 0 chr5 112680428 112680456 -90405076 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr5 112680694 112680723 -90404809 + (TG)n Simple_repeat Simple_repeat 1 29 0 445 354 33 69 chr5 112681021 112681383 -90404149 - MLT1K LTR MaLR 0 588 240 256 212 15 15 chr5 112681508 112681574 -90403958 + A-rich Low_complexity Low_complexity 4 69 0 288 172 0 0 chr5 112681787 112681845 -90403687 + (CA)n Simple_repeat Simple_repeat 1 58 0 543 170 0 16 chr5 112682855 112683253 -90402279 + (TA)n Simple_repeat Simple_repeat 1 391 0 301 264 47 38 chr5 112683253 112683359 -90402173 - L1MC4 LINE L1 -1323 6719 6613 * 357 276 26 35 chr5 112683264 112683380 -90402152 + L1MC4 LINE L1 6614 6728 -1314 2025 129 7 0 chr5 112683648 112683950 -90401582 - AluSx SINE Alu -5 307 4 369 0 0 0 chr5 112685287 112685328 -90400204 + (TG)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 112685334 112685358 -90400174 + AT_rich Low_complexity Low_complexity 1 24 0 42 20 0 0 chr5 112685405 112685454 -90400078 + AT_rich Low_complexity Low_complexity 1 49 0 1908 120 57 0 chr5 112685535 112685818 -90399714 + AluSc SINE Alu 1 299 -10 22 70 0 0 chr5 112686369 112686412 -90399120 + AT_rich Low_complexity Low_complexity 1 43 0 9511 83 4 26 chr5 112686412 112688333 -90397199 - L1PA7 LINE L1 -13 6141 4252 2194 125 3 0 chr5 112688333 112688645 -90396887 - AluSp SINE Alu 0 313 1 9511 83 4 26 chr5 112688645 112688866 -90396666 - L1PA7 LINE L1 -1902 4252 4028 22 56 0 0 chr5 112689163 112689199 -90396333 + AT_rich Low_complexity Low_complexity 1 36 0 3277 106 4 2 chr5 112689496 112689987 -90395545 - L1PA7 LINE L1 -2119 4027 3536 4299 168 56 26 chr5 112691767 112692646 -90392886 - L1MA9 LINE L1 -7 6305 5401 1005 237 22 9 chr5 112694209 112694441 -90391091 + L1MC1 LINE L1 6099 6333 0 23 0 0 0 chr5 112694526 112694549 -90390983 + AT_rich Low_complexity Low_complexity 1 23 0 530 269 34 23 chr5 112694920 112695095 -90390437 - MIR SINE MIR -18 244 68 306 0 0 0 chr5 112695121 112695155 -90390377 + (TA)n Simple_repeat Simple_repeat 2 35 0 240 100 0 0 chr5 112695496 112695536 -90389996 + (TC)n Simple_repeat Simple_repeat 1 40 0 2524 49 10 0 chr5 112695651 112695957 -90389575 - AluY SINE Alu -2 309 1 210 237 26 13 chr5 112696114 112696190 -90389342 + (TA)n Simple_repeat Simple_repeat 2 78 0 240 232 18 0 chr5 112696331 112696387 -90389145 + MER34 LTR ERV1 3 59 -483 196 233 70 47 chr5 112696457 112696543 -90388989 - MER5C DNA MER1_type -1 323 236 1104 212 73 25 chr5 112696882 112696911 -90388621 - MSTB1 LTR MaLR 0 432 406 1792 150 11 75 chr5 112696911 112697271 -90388261 + MER1B DNA MER1_type 1 337 0 1104 212 73 25 chr5 112697271 112697515 -90388017 - MSTB1 LTR MaLR -26 406 146 265 320 10 58 chr5 112697504 112697607 -90387925 + MLT1G LTR MaLR 193 290 -300 * 22 56 0 0 chr5 112698183 112698219 -90387313 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 112698357 112698378 -90387154 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr5 112699483 112699512 -90386020 + (CA)n Simple_repeat Simple_repeat 2 30 0 2234 278 39 16 chr5 112699544 112700282 -90385250 + Charlie1a DNA MER1_type 1 755 -700 2169 122 28 22 chr5 112701155 112701517 -90384015 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 112702228 112702257 -90383275 + AT_rich Low_complexity Low_complexity 1 29 0 1606 248 23 44 chr5 112702294 112702722 -90382810 + MLT1E2 LTR MaLR 2 420 -206 4378 63 3 0 chr5 112702826 112703394 -90382138 + L1PA7 LINE L1 5585 6154 0 188 342 40 0 chr5 112705248 112705324 -90380208 + L2 LINE L2 3000 3078 -235 1581 209 40 8 chr5 112705497 112705851 -90379681 - MLT1A1 LTR MaLR 0 365 1 26 50 0 0 chr5 112706059 112706099 -90379433 + AT_rich Low_complexity Low_complexity 1 40 0 200 229 0 0 chr5 112706227 112706262 -90379270 - MIR SINE MIR -16 246 212 827 197 134 36 chr5 112706500 112706723 -90378809 - AluJo SINE Alu -67 245 1 6317 127 133 116 chr5 112707687 112709354 -90376178 + pTR5 LTR ERV1 743 2438 0 30 59 0 0 chr5 112709958 112710009 -90375523 + AT_rich Low_complexity Low_complexity 1 51 0 240 241 0 81 chr5 112710186 112710273 -90375259 - LTR33A LTR ERVL -23 500 421 180 186 159 88 chr5 112710275 112710388 -90375144 - L2 LINE L2 -1277 2037 1917 2729 195 25 60 chr5 112710927 112711661 -90373871 + MER67C LTR ERV1 3 710 0 188 125 62 0 chr5 112711805 112711869 -90373663 + (TA)n Simple_repeat Simple_repeat 1 68 0 3934 139 17 16 chr5 112711921 112712566 -90372966 - MER39B LTR ERV1 -2 651 6 30 27 0 0 chr5 112712874 112712911 -90372621 + AT_rich Low_complexity Low_complexity 1 37 0 32 67 0 0 chr5 112713012 112713072 -90372460 + AT_rich Low_complexity Low_complexity 1 60 0 1817 164 0 7 chr5 112713949 112714262 -90371270 - AluSx SINE Alu 0 311 1 1616 231 27 8 chr5 112714374 112714746 -90370786 + MER57B LTR ERV1 1 379 -55 6144 70 6 16 chr5 112714767 112715579 -90369953 + HERVL-A1 LTR ERVL 4851 5654 0 2765 96 3 8 chr5 112715579 112715965 -90369567 + MLT2A1 LTR ERVL 1 384 -60 424 17 50 0 chr5 112715966 112716026 -90369506 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 199 113 38 0 chr5 112716046 112716099 -90369433 + (TA)n Simple_repeat Simple_repeat 1 55 0 411 73 0 0 chr5 112716140 112716195 -90369337 + MLT2A1 LTR ERVL 399 453 0 754 352 25 16 chr5 112716364 112716926 -90368606 + PABL_B-int LTR ERV1 2571 3137 -3985 300 143 0 0 chr5 112717091 112717140 -90368392 + MLT1E2 LTR MaLR 576 624 -2 254 378 7 40 chr5 112718815 112718966 -90366566 - L2 LINE L2 -22 3291 3146 711 82 20 0 chr5 112720028 112720126 -90365406 - L1PA13 LINE L1 -19 6144 6045 303 93 0 0 chr5 112720198 112720212 -90365320 + (CA)n Simple_repeat Simple_repeat 1 57 0 303 93 0 0 chr5 112720212 112720255 -90365277 + (CA)n Simple_repeat Simple_repeat 2 44 0 4211 96 30 2 chr5 112720390 112720995 -90364537 - L1PA14 LINE L1 -2 6159 5538 289 296 0 11 chr5 112722029 112722117 -90363415 - MIR SINE MIR -115 147 61 295 307 97 40 chr5 112722331 112722507 -90363025 - MIR SINE MIR -12 250 65 792 284 85 16 chr5 112722634 112722997 -90362535 + L1MC4 LINE L1 7494 7881 -161 31256 109 12 62 chr5 112723115 112727421 -90358111 - L1PA7 LINE L1 0 6154 2278 512 44 0 0 chr5 112727421 112727489 -90358043 - L1PA2 LINE L1 0 6155 6088 31256 109 12 62 chr5 112727489 112729650 -90355882 - L1PA7 LINE L1 -3876 2278 12 221 348 121 14 chr5 112730014 112730155 -90355377 - MER5A DNA MER1_type 0 189 34 189 171 0 0 chr5 112730374 112730409 -90355123 + (CA)n Simple_repeat Simple_repeat 2 36 0 1875 169 79 105 chr5 112730496 112730963 -90354569 - MLT2B2 LTR ERVL -60 455 1 22 70 0 0 chr5 112731922 112731965 -90353567 + AT_rich Low_complexity Low_complexity 1 43 0 279 0 0 0 chr5 112732749 112732780 -90352752 + (CA)n Simple_repeat Simple_repeat 2 32 0 267 31 0 0 chr5 112732779 112732811 -90352721 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 1204 196 4 31 chr5 112732820 112733080 -90352452 - AluJo SINE Alu -45 267 15 260 280 0 13 chr5 112733124 112733199 -90352333 + L2 LINE L2 1708 1781 -1533 346 115 67 39 chr5 112733342 112733446 -90352086 + CT-rich Low_complexity Low_complexity 4 110 0 25 51 0 0 chr5 112734222 112734261 -90351271 + AT_rich Low_complexity Low_complexity 1 39 0 29 47 0 0 chr5 112734566 112734609 -90350923 + AT_rich Low_complexity Low_complexity 1 43 0 309 165 130 35 chr5 112734740 112734855 -90350677 - L1MB8 LINE L1 -3 6175 6050 391 267 79 0 chr5 112734862 112734963 -90350569 - MER81 DNA DNA -5 109 1 309 220 120 20 chr5 112735006 112735106 -90350426 - L1M4 LINE L1 -1624 4522 4413 2536 58 0 0 chr5 112735739 112736047 -90349485 - AluY SINE Alu -3 308 1 18069 53 2 10 chr5 112787216 112789609 -90295923 - L1P LINE L1 -1766 4380 2008 14753 86 7 0 chr5 112789612 112791585 -90293947 + L1P LINE L1 1 1987 -4159 180 194 0 0 chr5 112791599 112791630 -90293902 - MIR SINE MIR -114 94 64 1444 207 136 16 chr5 112791684 112792066 -90293466 - MSTA LTR MaLR 0 428 1 2365 181 11 24 chr5 112792494 112792963 -90292569 + MLT1C LTR MaLR 5 467 0 2208 99 0 7 chr5 112793915 112794217 -90291315 + AluSq SINE Alu 1 300 -13 292 143 0 0 chr5 112795259 112795301 -90290231 + MER52-int LTR ERV1 4843 4884 -2207 4500 258 19 12 chr5 112795343 112796555 -90288977 - MER61D-int LTR ERV1 -5747 1249 29 682 235 39 9 chr5 112796568 112796775 -90288757 - MER61D LTR ERV1 -18 750 338 514 298 0 0 chr5 112798050 112798191 -90287341 - L2 LINE L2 0 3313 3173 375 210 116 29 chr5 112798191 112798329 -90287203 - L1MCa LINE L1 -4979 1447 1298 5346 209 18 32 chr5 112798339 112799835 -90285697 + L1PA13 LINE L1 1169 2660 -4137 5765 140 9 15 chr5 112799853 112800920 -90284612 + L1PA15 LINE L1 5104 6165 0 653 278 106 27 chr5 112801103 112801473 -90284059 + L1M4 LINE L1 4219 4643 -1503 378 0 0 0 chr5 112801473 112801515 -90284017 + (TA)n Simple_repeat Simple_repeat 1 42 0 653 278 106 27 chr5 112801515 112801662 -90283870 + L1M4 LINE L1 4643 4777 -1369 276 302 10 0 chr5 112801694 112801790 -90283742 + L1M4 LINE L1 4842 4938 -1208 539 237 68 23 chr5 112801847 112802066 -90283466 + L1M4 LINE L1 5164 5392 -754 * 3240 189 52 80 chr5 112802050 112802247 -90283285 + L1MB8 LINE L1 5188 5389 -789 2394 85 0 0 chr5 112802247 112802552 -90282980 + AluY SINE Alu 1 305 -6 3240 189 52 80 chr5 112802552 112803396 -90282136 + L1MB8 LINE L1 5389 6177 -1 389 274 34 0 chr5 112803414 112803531 -90282001 + L1ME1 LINE L1 6010 6130 -36 811 320 103 16 chr5 112803910 112804335 -90281197 + L2 LINE L2 209 670 -2644 678 259 95 48 chr5 112804896 112805275 -90280257 + L1ME3 LINE L1 4754 5150 -996 1394 273 117 25 chr5 112805294 112805958 -90279574 + L1ME3 LINE L1 5255 5981 -181 5687 223 50 19 chr5 112805961 112806844 -90278688 - L1 LINE L1 -1672 4474 3518 1600 203 0 7 chr5 112806844 112807144 -90278388 - AluJo SINE Alu -10 302 5 5687 223 50 19 chr5 112807144 112807869 -90277663 - L1 LINE L1 -2628 3518 2817 1898 212 26 2 chr5 112807872 112808296 -90277236 + L1MB1 LINE L1 4479 4912 -1234 431 125 9 45 chr5 112808324 112808436 -90277096 + (TA)n Simple_repeat Simple_repeat 1 108 0 1638 211 18 20 chr5 112808441 112808834 -90276698 + L1MB1 LINE L1 5771 6162 -6 211 216 0 0 chr5 112809020 112809057 -90276475 + (TATG)n Simple_repeat Simple_repeat 4 40 0 22 56 0 0 chr5 112809179 112809215 -90276317 + AT_rich Low_complexity Low_complexity 1 36 0 1596 208 69 10 chr5 112809216 112809624 -90275908 - L1MC/D LINE L1 -466 5845 5414 1336 237 75 71 chr5 112809620 112810143 -90275389 + L1MD2 LINE L1 5816 6340 -19 * 29 70 0 0 chr5 112810807 112810864 -90274668 + AT_rich Low_complexity Low_complexity 1 57 0 348 64 0 0 chr5 112811103 112811150 -90274382 + (TA)n Simple_repeat Simple_repeat 2 48 0 1132 277 40 44 chr5 112811608 112812333 -90273199 - L1MC/D LINE L1 -2400 3815 3094 35 54 0 0 chr5 112812570 112812626 -90272906 + AT_rich Low_complexity Low_complexity 1 56 0 13020 59 2 6 chr5 112812953 112814641 -90270891 - L1PA4 LINE L1 -3771 2375 694 24143 39 2 0 chr5 112814641 112818422 -90267110 + L1PA4 LINE L1 2360 6153 -2 335 345 36 31 chr5 112818438 112818632 -90266900 + L1ME LINE L1 5508 5702 -419 536 242 86 19 chr5 112818799 112819055 -90266477 + L1M4 LINE L1 2110 2382 -3764 202 296 42 14 chr5 112819443 112819514 -90266018 + L2 LINE L2 3241 3313 0 252 184 0 0 chr5 112820574 112820623 -90264909 - L1MB8 LINE L1 0 6178 6130 198 143 0 0 chr5 112821683 112821718 -90263814 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 461 368 83 64 chr5 112821722 112823419 -90262113 - L2 LINE L2 -1 3271 1552 28 29 0 0 chr5 112824227 112824262 -90261270 + AT_rich Low_complexity Low_complexity 1 35 0 352 287 27 27 chr5 112824675 112824825 -90260707 - L1MC/D LINE L1 -4534 1862 1713 333 321 51 69 chr5 112824827 112825160 -90260372 - HAL1 LINE L1 -1219 1288 962 18812 98 5 2 chr5 112825202 112827930 -90257602 - L1P LINE L1 -978 5168 2432 2954 93 2 0 chr5 112827926 112828322 -90257210 - L1P3 LINE L1 -6061 400 4 * 1780 160 17 130 chr5 112828322 112828798 -90256734 + LTR38B LTR ERV1 189 610 0 2474 250 30 32 chr5 112829287 112830026 -90255506 + L1ME1 LINE L1 5333 6069 -97 462 18 0 0 chr5 112830052 112830107 -90255425 + (TG)n Simple_repeat Simple_repeat 2 56 0 304 143 196 0 chr5 112830208 112830264 -90255268 - MER89 LTR ERV1 -73 486 420 27 62 0 0 chr5 112830264 112830312 -90255220 + AT_rich Low_complexity Low_complexity 1 48 0 2312 29 4 4 chr5 112830555 112830835 -90254697 - L1PA3 LINE L1 0 6155 5876 4580 19 0 0 chr5 112830835 112831362 -90254170 + L1PA3 LINE L1 5335 5861 -294 268 386 35 7 chr5 112832306 112832451 -90253081 + MIR SINE MIR 19 167 -95 749 245 33 28 chr5 112832460 112832672 -90252860 - MIR SINE MIR -10 252 40 23 0 0 0 chr5 112834145 112834168 -90251364 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr5 112834285 112834318 -90251214 + (TG)n Simple_repeat Simple_repeat 2 34 0 2141 78 0 7 chr5 112835531 112835859 -90249673 - AluY SINE Alu 0 329 4 533 237 115 0 chr5 112837466 112837605 -90247927 - MIR SINE MIR -20 242 88 3506 196 32 7 chr5 112839012 112839702 -90245830 - MER39 LTR ERV1 0 707 1 284 322 122 24 chr5 112839825 112840030 -90245502 - MIR SINE MIR -6 256 32 797 258 60 83 chr5 112840172 112840563 -90244969 - MER34 LTR ERV1 -23 519 142 2030 158 61 17 chr5 112840563 112840973 -90244559 + MSTA LTR MaLR 1 428 0 797 258 60 83 chr5 112840973 112841112 -90244420 - MER34 LTR ERV1 -400 142 1 3904 34 6 0 chr5 112841745 112842214 -90243318 - L1PA3 LINE L1 0 6155 5684 40 0 0 36 chr5 112842519 112842539 -90242993 + AT_rich Low_complexity Low_complexity 1 20 -33 1722 212 0 0 chr5 112842539 112842846 -90242686 + 7SLRNA srpRNA srpRNA 1 307 -13 40 0 0 36 chr5 112842846 112842880 -90242652 + AT_rich Low_complexity Low_complexity 20 53 0 1889 140 0 20 chr5 112843181 112843500 -90242032 - AluSx SINE Alu 0 312 7 1164 164 75 0 chr5 112843583 112843797 -90241735 + MER30 DNA MER1_type 1 230 0 2414 52 0 3 chr5 112843885 112844176 -90241356 + AluY SINE Alu 1 290 -21 1031 165 43 0 chr5 112844336 112844524 -90241008 - L1PA13 LINE L1 0 6163 5968 246 318 114 42 chr5 112844596 112844832 -90240700 + MIR SINE MIR 10 262 0 38 22 0 0 chr5 112845205 112845250 -90240282 + AT_rich Low_complexity Low_complexity 1 45 0 237 159 0 0 chr5 112845251 112845295 -90240237 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr5 112845623 112845644 -90239888 + AT_rich Low_complexity Low_complexity 1 21 0 11529 100 2 1 chr5 112845853 112847430 -90238102 + THE1A-int LTR MaLR 2 1580 0 1976 112 19 70 chr5 112847430 112847804 -90237728 + THE1A LTR MaLR 1 355 0 12805 34 2 2 chr5 112847857 112850180 -90235352 + L1PA4 LINE L1 3832 6152 -3 5675 220 121 72 chr5 112850340 112850687 -90234845 + L1MDa LINE L1 17 346 -6194 1825 152 37 35 chr5 112850687 112851061 -90234471 - THE1C LTR MaLR 0 375 1 5675 220 121 72 chr5 112851061 112852581 -90232951 + L1MDa LINE L1 346 2054 -4486 275 143 0 0 chr5 112852581 112852623 -90232909 - MLT1E2 LTR MaLR -535 91 50 5675 220 121 72 chr5 112852623 112852959 -90232573 + L1MDa LINE L1 2054 2372 -4168 26 93 0 0 chr5 112852960 112853035 -90232497 + AT_rich Low_complexity Low_complexity 1 75 0 43 20 0 0 chr5 112853127 112853177 -90232355 + AT_rich Low_complexity Low_complexity 1 50 0 1381 217 39 14 chr5 112853247 112853533 -90231999 + AluJo SINE Alu 1 293 -19 1933 126 0 0 chr5 112853538 112853808 -90231724 + AluSg SINE Alu 1 270 -40 429 36 0 0 chr5 112853808 112853863 -90231669 + (TC)n Simple_repeat Simple_repeat 2 56 0 382 223 25 0 chr5 112853884 112854005 -90231527 - L1M4 LINE L1 -1720 4426 4303 227 217 22 0 chr5 112854006 112854052 -90231480 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 767 365 22 49 chr5 112854052 112854504 -90231028 + L1MD1 LINE L1 396 835 -6234 1340 270 51 11 chr5 112854524 112855135 -90230397 + L1M3 LINE L1 4065 4699 -1447 277 214 0 18 chr5 112855136 112855192 -90230340 + L1MD1 LINE L1 960 1014 -6084 2292 283 63 29 chr5 112855959 112857490 -90228042 + L1MD1 LINE L1 1491 2777 -4390 309 153 0 0 chr5 112857491 112857550 -90227982 + L1MA4 LINE L1 6147 6205 -95 804 244 10 10 chr5 112857550 112857743 -90227789 + MLT1A1 LTR MaLR 171 363 -2 11871 208 35 28 chr5 112857769 112861988 -90223544 + L1MA8 LINE L1 3293 7541 -169 1579 166 17 42 chr5 112861988 112862300 -90223232 - AluJo SINE Alu 0 305 1 11871 208 35 28 chr5 112862300 112862451 -90223081 + L1MA8 LINE L1 7541 7690 -20 930 256 100 4 chr5 112862491 112863047 -90222485 + L1M3 LINE L1 4715 5379 -801 266 0 29 0 chr5 112863047 112863081 -90222451 + (TA)n Simple_repeat Simple_repeat 2 36 0 930 256 100 4 chr5 112863081 112863155 -90222377 + L1M3 LINE L1 5379 5445 -735 * 2846 238 68 50 chr5 112863149 112864764 -90220768 + L1MD1 LINE L1 4836 6493 -743 193 128 43 0 chr5 112864764 112864811 -90220721 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 401 239 11 23 chr5 112864839 112864927 -90220605 + MER21B LTR ERV1 1 87 -776 806 251 33 24 chr5 112864984 112865195 -90220337 + MER21B LTR ERV1 98 310 -553 992 241 71 47 chr5 112865199 112865441 -90220091 + MER21B LTR ERV1 459 713 -150 252 0 0 0 chr5 112865441 112865469 -90220063 + (AATTG)n Simple_repeat Simple_repeat 2 29 0 992 241 71 47 chr5 112865469 112865566 -90219966 + MER21B LTR ERV1 713 806 -57 282 132 0 0 chr5 112865592 112865645 -90219887 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1443 187 49 94 chr5 112865649 112866115 -90219417 + L1MD1 LINE L1 6510 6954 -309 1799 223 54 0 chr5 112866474 112866865 -90218667 - MER54A LTR ERVL 0 901 490 713 287 60 0 chr5 112867203 112867419 -90218113 - MIR SINE MIR -21 241 13 356 267 33 73 chr5 112867619 112867769 -90217763 - MIR SINE MIR 0 262 119 1679 228 41 43 chr5 112868046 112868485 -90217047 + LTR47B LTR ERVL 1 438 -5 1067 338 47 53 chr5 112870016 112871093 -90214439 + LTR57-int LTR ERVL 1494 2397 -2946 371 232 14 42 chr5 112871100 112871256 -90214276 - MER52A LTR ERV1 -5 1750 1603 2872 80 3 5 chr5 112871256 112871632 -90213900 - THE1C LTR MaLR 0 375 1 412 298 126 61 chr5 112871639 112871901 -90213631 - MER52A LTR ERV1 -273 1482 1204 * 1015 238 256 58 chr5 112871879 112872505 -90213027 - LTR28 LTR ERV1 -270 750 1 1894 132 0 0 chr5 112872575 112872832 -90212700 + AluSx SINE Alu 20 276 -36 432 37 0 0 chr5 112872838 112872892 -90212640 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 279 336 73 7 chr5 112872892 112873029 -90212503 + LTR57-int LTR ERVL 2609 2754 -3293 2413 97 0 0 chr5 112873932 112874241 -90211291 + AluSc SINE Alu 1 309 0 450 322 60 34 chr5 112874335 112874835 -90210697 + LTR57-int LTR ERVL 3619 4669 -985 291 228 0 63 chr5 112875625 112875704 -90209828 + LOR1-int LTR ERV1 3978 4258 -2340 1702 216 10 60 chr5 112875718 112876134 -90209398 + LTR47B LTR ERVL 49 443 0 250 274 144 20 chr5 112876434 112876635 -90208897 + L1MEd LINE L1 988 1213 -4906 1653 238 81 33 chr5 112876882 112877423 -90208109 + MLT1F1 LTR MaLR 1 567 0 24 0 0 0 chr5 112877526 112877550 -90207982 + AT_rich Low_complexity Low_complexity 1 24 0 2436 211 71 22 chr5 112878261 112878552 -90206980 - MER77 LTR ERV1 0 605 330 2469 72 0 3 chr5 112878552 112878857 -90206675 - AluY SINE Alu -7 304 1 2436 211 71 22 chr5 112878857 112879142 -90206390 - MER77 LTR ERV1 -275 330 1 26 0 0 0 chr5 112879185 112879211 -90206321 + AT_rich Low_complexity Low_complexity 1 26 0 852 286 115 47 chr5 112881128 112881614 -90203918 + L2 LINE L2 950 1468 -1846 891 217 24 25 chr5 112881757 112881993 -90203539 - L1MD2 LINE L1 0 6359 6004 3538 192 65 22 chr5 112882377 112883210 -90202322 - L1MC3 LINE L1 -23 8180 7312 5312 274 53 34 chr5 112883218 112886082 -90199450 - L1MC3 LINE L1 -747 5817 3341 739 203 14 0 chr5 112886103 112886241 -90199291 + BC200 scRNA scRNA 1 140 -60 689 294 80 11 chr5 112886252 112886629 -90198903 - L1MC3 LINE L1 -3239 3325 2923 287 291 119 18 chr5 112886738 112886936 -90198596 - L1MC3 LINE L1 -5836 341 92 204 291 0 0 chr5 112887150 112887205 -90198327 - L3b LINE CR1 0 1583 1529 1685 142 189 9 chr5 112888660 112888998 -90196534 - MSTA LTR MaLR -29 399 1 287 197 98 0 chr5 112889947 112890008 -90195524 + LTR43 LTR ERV1 222 288 -314 732 62 0 0 chr5 112890552 112890648 -90194884 + AluY SINE Alu 207 302 -9 1970 70 4 8 chr5 112890648 112890905 -90194627 + AluY SINE Alu 40 295 -16 359 56 19 0 chr5 112891391 112891445 -90194087 + (TG)n Simple_repeat Simple_repeat 2 56 0 563 257 41 50 chr5 112892066 112892284 -90193248 - MER58A DNA MER1_type 0 224 9 194 180 11 34 chr5 112892420 112892509 -90193023 + (TA)n Simple_repeat Simple_repeat 1 87 0 185 78 39 39 chr5 112892534 112892585 -90192947 + (TA)n Simple_repeat Simple_repeat 2 52 0 1112 210 112 19 chr5 112892628 112892895 -90192637 - MSTA LTR MaLR -136 292 1 9106 150 6 38 chr5 112892895 112894526 -90191006 - MSTA-int LTR MaLR 0 1580 3 1845 161 130 16 chr5 112894528 112894912 -90190620 - MSTA LTR MaLR 0 428 1 284 214 0 10 chr5 112894950 112895048 -90190484 + (TA)n Simple_repeat Simple_repeat 1 97 0 812 251 70 24 chr5 112895127 112895458 -90190074 - L1MC4 LINE L1 -672 7370 7025 307 259 44 48 chr5 112895488 112895716 -90189816 - L1ME LINE L1 -5284 921 695 2257 81 10 3 chr5 112895753 112896051 -90189481 + AluY SINE Alu 1 300 -11 313 392 51 26 chr5 112896236 112896547 -90188985 - L1ME LINE L1 -5937 459 141 23 54 0 0 chr5 112896647 112896684 -90188848 + AT_rich Low_complexity Low_complexity 1 37 0 200 152 30 61 chr5 112896952 112897018 -90188514 + A-rich Low_complexity Low_complexity 2 65 0 2083 94 47 0 chr5 112897188 112897464 -90188068 + AluSq SINE Alu 1 289 -24 346 317 89 48 chr5 112897982 112898253 -90187279 + L1ME4a LINE L1 5840 6121 0 2255 193 39 15 chr5 112898287 112898744 -90186788 + MER70A LTR ERVL 1 468 -4 2614 55 0 0 chr5 112900132 112900441 -90185091 - AluY SINE Alu -2 309 1 1770 160 3 10 chr5 112902190 112902483 -90183049 + AluSx SINE Alu 10 300 -12 489 47 0 0 chr5 112902495 112902559 -90182973 + (CA)n Simple_repeat Simple_repeat 2 65 0 27 29 0 0 chr5 112902650 112902684 -90182848 + AT_rich Low_complexity Low_complexity 1 34 0 1888 133 3 18 chr5 112903409 112903718 -90181814 + AluSx SINE Alu 1 305 0 21 0 0 0 chr5 112905085 112905106 -90180426 + AT_rich Low_complexity Low_complexity 1 21 0 460 364 44 44 chr5 112905744 112906109 -90179423 + MLT1K LTR MaLR 146 510 -78 6390 66 5 3 chr5 112906979 112907831 -90177701 - L1P LINE L1 -3316 2830 1978 838 74 0 16 chr5 112907831 112907952 -90177580 + L1PA5 LINE L1 6036 6154 0 1218 154 58 162 chr5 112909018 112909394 -90176138 - MER1B DNA MER1_type 0 337 1 2861 16 0 0 chr5 112909710 112910025 -90175507 + AluYb8 SINE Alu 1 315 -3 402 304 120 5 chr5 112911719 112911936 -90173596 + MIR SINE MIR 15 256 -6 2561 40 0 3 chr5 112912039 112912341 -90173191 - AluY SINE Alu -10 301 1 28 29 0 0 chr5 112912489 112912524 -90173008 + AT_rich Low_complexity Low_complexity 1 35 0 325 357 45 13 chr5 112914826 112914983 -90170549 - L2 LINE L2 0 3272 3111 32 0 0 0 chr5 112916270 112916302 -90169230 + AT_rich Low_complexity Low_complexity 1 32 0 2142 107 17 0 chr5 112916437 112916736 -90168796 - AluSq SINE Alu -8 305 2 186 115 58 0 chr5 112917924 112917976 -90167556 + (TA)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr5 112918361 112918382 -90167150 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 112919229 112919257 -90166275 + AT_rich Low_complexity Low_complexity 1 28 0 1941 142 14 0 chr5 112919628 112919923 -90165609 - AluSx SINE Alu -13 299 1 180 297 78 31 chr5 112920151 112920215 -90165317 + MIR SINE MIR 45 111 -97 214 162 0 0 chr5 112920600 112920637 -90164895 + GA-rich Low_complexity Low_complexity 2 38 0 35 24 0 0 chr5 112923483 112923525 -90162007 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 112923668 112923697 -90161835 + AT_rich Low_complexity Low_complexity 1 29 0 231 226 16 0 chr5 112923748 112923810 -90161722 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 2481 148 24 2 chr5 112925214 112925639 -90159893 - MER57B LTR ERV1 0 434 1 25 0 0 0 chr5 112927106 112927131 -90158401 + AT_rich Low_complexity Low_complexity 1 25 0 1964 125 14 0 chr5 112927397 112927722 -90157810 + AluSq SINE Alu 1 329 0 192 77 0 0 chr5 112929561 112929587 -90155945 + (GA)n Simple_repeat Simple_repeat 1 26 0 66 25 0 0 chr5 112931187 112931267 -90154265 + AT_rich Low_complexity Low_complexity 1 80 0 1129 259 125 30 chr5 112933866 112934307 -90151225 - MLT1E LTR MaLR 0 593 111 2028 109 29 26 chr5 112934441 112934753 -90150779 + AluSq SINE Alu 1 313 0 21 0 0 0 chr5 112934862 112934883 -90150649 + AT_rich Low_complexity Low_complexity 1 21 0 200 360 97 52 chr5 112935576 112936020 -90149512 + L2 LINE L2 2808 3271 -1 394 325 48 16 chr5 112937621 112937666 -90147866 - MIR SINE MIR -49 213 171 1028 199 58 0 chr5 112937666 112937872 -90147660 + MER20 DNA MER1_type 1 218 -1 394 325 48 16 chr5 112937872 112938014 -90147518 - MIR SINE MIR -91 171 20 201 315 203 14 chr5 112939205 112939348 -90146184 - MIR3 SINE MIR -7 201 32 222 314 139 12 chr5 112940545 112940631 -90144901 + MIR SINE MIR 21 117 -145 339 141 39 0 chr5 112941252 112941330 -90144202 + CT-rich Low_complexity Low_complexity 2 82 0 1672 142 56 8 chr5 112941336 112941603 -90143929 - AluSx SINE Alu -32 280 1 201 39 0 0 chr5 112942565 112942591 -90142941 + (TA)n Simple_repeat Simple_repeat 2 27 0 297 236 264 7 chr5 112942705 112942829 -90142703 - MIR3 SINE MIR -62 146 15 697 321 22 48 chr5 112943200 112943617 -90141915 - L1PA12 LINE L1 -7169 412 7 1980 96 3 34 chr5 112943651 112943970 -90141562 + AluY SINE Alu 1 310 0 369 300 14 36 chr5 112944008 112944148 -90141384 + L2 LINE L2 3159 3295 -18 213 282 12 12 chr5 112944156 112944241 -90141291 + GA-rich Low_complexity Low_complexity 3 87 0 591 275 51 126 chr5 112944645 112945191 -90140341 + MLT1H1 LTR MaLR 45 549 -6 1807 156 20 0 chr5 112945953 112946248 -90139284 - AluSx SINE Alu -11 301 1 965 207 74 25 chr5 112948180 112948465 -90137067 - MER33 DNA MER1_type -22 302 4 2323 182 33 14 chr5 112948913 112949429 -90136103 - L1MA9 LINE L1 0 6312 5787 36 70 0 0 chr5 112949433 112949504 -90136028 + AT_rich Low_complexity Low_complexity 1 71 0 301 343 172 0 chr5 112951039 112951173 -90134359 - MER5A DNA MER1_type -1 188 32 2033 160 47 59 chr5 112951198 112951622 -90133910 + MSTA LTR MaLR 10 428 0 849 337 48 22 chr5 112951762 112952175 -90133357 + MLT1K LTR MaLR 122 545 -43 26 30 0 0 chr5 112952582 112952615 -90132917 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 112952978 112953001 -90132531 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 112953051 112953076 -90132456 + AT_rich Low_complexity Low_complexity 1 25 0 297 250 31 0 chr5 112953928 112953992 -90131540 + L2 LINE L2 3188 3253 -19 269 51 26 0 chr5 112954813 112954852 -90130680 + (TA)n Simple_repeat Simple_repeat 2 41 0 1996 144 0 3 chr5 112955458 112955757 -90129775 + AluSx SINE Alu 1 298 -14 1231 228 70 14 chr5 112956056 112956341 -90129191 - AluJo SINE Alu -1 301 1 333 0 0 0 chr5 112957674 112957711 -90127821 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1094 151 146 155 chr5 112958230 112958662 -90126870 + MSTA LTR MaLR 1 428 0 194 192 19 0 chr5 112958997 112959049 -90126483 + T-rich Low_complexity Low_complexity 2 54 0 25 51 0 0 chr5 112959157 112959196 -90126336 + AT_rich Low_complexity Low_complexity 1 39 0 213 39 0 0 chr5 112959974 112960000 -90125532 + (TA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr5 112960000 112960022 -90125510 + AT_rich Low_complexity Low_complexity 1 22 0 6027 153 57 23 chr5 112960024 112961211 -90124321 + Tigger3b DNA MER2_type 3 1230 -1 25 31 0 0 chr5 112961437 112961469 -90124063 + AT_rich Low_complexity Low_complexity 1 32 0 379 200 12 0 chr5 112961934 112962014 -90123518 + Tigger3(Golem) DNA MER2_type 2381 2461 -568 288 322 35 23 chr5 112962354 112962441 -90123091 + L2 LINE L2 3153 3240 -32 378 376 103 40 chr5 112962651 112963050 -90122482 - L2 LINE L2 -13 3259 2836 22 35 0 0 chr5 112963455 112963484 -90122048 + AT_rich Low_complexity Low_complexity 1 29 0 725 300 79 28 chr5 112963798 112964191 -90121341 - MLT1L LTR MaLR -180 435 23 219 130 14 58 chr5 112964238 112964307 -90121225 + (TATAA)n Simple_repeat Simple_repeat 3 68 0 1606 183 126 28 chr5 112964393 112964781 -90120751 - MSTA LTR MaLR 0 428 3 184 274 68 0 chr5 112964918 112964991 -90120541 + MIR SINE MIR 173 250 -12 19069 187 16 3 chr5 112965452 112967891 -90117641 - L1PA13 LINE L1 0 7601 5195 222 62 0 0 chr5 112967891 112967923 -90117609 + (TTG)n Simple_repeat Simple_repeat 3 34 0 19069 187 16 3 chr5 112967923 112970308 -90115224 - L1PA13 LINE L1 -2406 5195 2714 2039 173 39 0 chr5 112970297 112970655 -90114877 - L1PA13 LINE L1 -7209 372 1 * 2129 191 20 8 chr5 112970740 112971138 -90114394 - MER49 LTR ERV1 0 923 521 28807 89 7 8 chr5 112971144 112977281 -90108251 - L1PA6 LINE L1 -18 6136 13 2652 130 108 21 chr5 112977283 112977753 -90107779 - MER49 LTR ERV1 -412 511 1 680 289 140 18 chr5 112977945 112978281 -90107251 - LTR40c LTR ERVL -70 395 19 28 48 0 0 chr5 112978490 112978532 -90107000 + AT_rich Low_complexity Low_complexity 1 42 0 743 225 60 22 chr5 112979693 112979875 -90105657 + MER5A DNA MER1_type 1 189 0 206 157 0 20 chr5 112980162 112980213 -90105319 + T-rich Low_complexity Low_complexity 5 54 0 354 276 90 45 chr5 112980734 112980890 -90104642 + MIR SINE MIR 89 251 -11 265 246 14 0 chr5 112981198 112981267 -90104265 - MLT1I LTR MaLR -328 81 12 2846 22 0 0 chr5 112981881 112982199 -90103333 + AluYb8 SINE Alu 1 318 0 405 244 70 45 chr5 112982298 112982454 -90103078 + MLT1I LTR MaLR 249 408 -1 299 271 21 21 chr5 112982639 112982779 -90102753 - MER104 DNA Tc2 -1 179 40 708 323 17 9 chr5 112982924 112983257 -90102275 + MLT1H1 LTR MaLR 9 391 -204 242 234 97 95 chr5 112983305 112983415 -90102117 + MLT1H LTR MaLR 410 514 -35 180 0 0 0 chr5 112983599 112983619 -90101913 + (GA)n Simple_repeat Simple_repeat 1 20 0 2109 110 0 3 chr5 112983720 112984012 -90101520 - AluSg SINE Alu -19 291 1 1003 295 55 6 chr5 112984070 112984395 -90101137 - MER93a LTR ERV1 -1 401 61 707 262 88 39 chr5 112984650 112984955 -90100577 + LTR52 LTR ERVL 1 320 -101 22 0 0 0 chr5 112985053 112985075 -90100457 + AT_rich Low_complexity Low_complexity 1 22 0 460 216 0 52 chr5 112985075 112985191 -90100341 - MER3 DNA MER1_type 0 209 100 749 278 51 29 chr5 112985222 112985712 -90099820 + L1M4 LINE L1 2669 3169 -2977 340 169 34 22 chr5 112985691 112985780 -90099752 + L1MEc LINE L1 2300 2389 -4007 * 606 148 123 26 chr5 112985792 112985947 -90099585 + L1MB7 LINE L1 6015 6184 0 312 155 0 82 chr5 112986060 112986157 -90099375 - L1MA7 LINE L1 0 6291 6203 765 294 83 52 chr5 112986170 112986449 -90099083 + L1MEc LINE L1 3293 3562 -2653 2105 118 0 3 chr5 112986449 112986768 -90098764 + AluSp SINE Alu 1 318 0 765 294 83 52 chr5 112986768 112986945 -90098587 + L1MEc LINE L1 3562 3732 -2483 294 29 0 0 chr5 112986945 112986980 -90098552 + (TAA)n Simple_repeat Simple_repeat 2 36 0 765 294 83 52 chr5 112986980 112987169 -90098363 + L1MEc LINE L1 3732 3961 -2254 319 360 7 29 chr5 112987647 112987786 -90097746 + MIR3 SINE MIR 9 144 -64 252 86 0 0 chr5 112987814 112987849 -90097683 + (TA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr5 112988116 112988137 -90097395 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 0 0 chr5 112988236 112988297 -90097235 + L1ME LINE L1 5584 5644 -477 263 318 45 27 chr5 112988558 112988668 -90096864 - L2 LINE L2 -4 3309 3198 231 36 0 0 chr5 112988754 112988782 -90096750 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 252 221 266 18 chr5 112989724 112989837 -90095695 + LTR40a LTR ERVL 1 141 -378 332 378 40 0 chr5 112990384 112990532 -90095000 - L2 LINE L2 -583 2731 2578 195 354 91 0 chr5 112990644 112990743 -90094789 - L2 LINE L2 0 3272 3165 537 353 57 49 chr5 112990749 112991256 -90094276 - LTR33 LTR ERVL -10 511 1 186 103 0 0 chr5 112991529 112991558 -90093974 + (CA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr5 112991571 112991595 -90093937 + AT_rich Low_complexity Low_complexity 1 24 0 1667 171 0 4 chr5 112991649 112991924 -90093608 + AluJb SINE Alu 35 308 -4 2014 172 32 30 chr5 112991967 112992431 -90093101 + L1MA7 LINE L1 5825 6289 -2 25 51 0 0 chr5 112992601 112992640 -90092892 + AT_rich Low_complexity Low_complexity 1 39 0 292 329 127 11 chr5 112995609 112995986 -90089546 + L1MC4a LINE L1 5506 5926 -1882 249 119 0 0 chr5 112995988 112996030 -90089502 + (CA)n Simple_repeat Simple_repeat 1 42 0 676 219 57 10 chr5 112996030 112996222 -90089310 - HsTC2a DNA Tc2 -6 736 536 5219 109 25 14 chr5 112996347 112997151 -90088381 - L1PA13 LINE L1 -1 6162 5350 3144 194 12 5 chr5 112997162 112997823 -90087709 + L1PA13 LINE L1 4665 5330 -816 615 310 80 22 chr5 112997824 112998185 -90087347 - HsTC2a DNA Tc2 -360 384 3 481 284 97 59 chr5 112998589 112998909 -90086623 - L2 LINE L2 -1905 1409 1078 2572 43 3 0 chr5 112999574 112999879 -90085653 + AluY SINE Alu 1 306 -5 218 116 23 0 chr5 113000000 113000043 -90085489 + (ATG)n Simple_repeat Simple_repeat 2 45 0 27 0 0 0 chr5 113000300 113000327 -90085205 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 113002399 113002420 -90083112 + AT_rich Low_complexity Low_complexity 1 21 0 1558 131 92 53 chr5 113002459 113002819 -90082713 - THE1C LTR MaLR 0 375 2 2036 215 69 22 chr5 113002875 113003391 -90082141 + L1MA9 LINE L1 999 1548 -4593 5170 140 29 11 chr5 113003391 113005117 -90080415 - L1PA15 LINE L1 -1 6164 4407 2036 215 69 22 chr5 113005117 113005195 -90080337 + L1MA9 LINE L1 1548 1621 -4520 1922 211 17 42 chr5 113005251 113005777 -90079755 + L1MA9 LINE L1 4275 4787 -1423 624 222 7 20 chr5 113005776 113005929 -90079603 + L1MA9 LINE L1 5955 6105 -271 * 29 28 0 0 chr5 113006161 113006197 -90079335 + AT_rich Low_complexity Low_complexity 1 36 0 1633 183 0 0 chr5 113006253 113006537 -90078995 - L1MA9 LINE L1 -371 5941 5658 4991 141 68 11 chr5 113007981 113008887 -90076645 - Tigger3b DNA MER2_type 0 1231 274 526 209 0 19 chr5 113008884 113008989 -90076543 - Tigger3b DNA MER2_type -1128 103 1 * 1677 200 54 78 chr5 113009048 113009512 -90076020 + MLT2B3 LTR ERVL 8 460 -94 276 185 0 0 chr5 113009661 113009715 -90075817 + (CA)n Simple_repeat Simple_repeat 2 55 0 372 171 0 0 chr5 113009735 113009805 -90075727 + MLT2B3 LTR ERVL 451 520 0 408 359 24 12 chr5 113009839 113010006 -90075526 - MLT1J LTR MaLR -176 335 167 234 380 49 0 chr5 113010571 113010713 -90074819 + LTR67 LTR ERVL 113 261 -296 186 43 0 0 chr5 113012509 113012532 -90073000 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1699 173 39 15 chr5 113012532 113012867 -90072665 - MER2 DNA MER2_type 0 344 2 802 212 7 0 chr5 113013503 113013654 -90071878 + MLT1B LTR MaLR 239 390 0 296 326 11 0 chr5 113013792 113013884 -90071648 + L2 LINE L2 2968 3060 -253 244 245 92 92 chr5 113013863 113013961 -90071571 + L2 LINE L2 3174 3271 -1 * 812 222 228 147 chr5 113014668 113015453 -90070079 + MER52A LTR ERV1 663 1511 -244 243 246 107 49 chr5 113015454 113015576 -90069956 + MER52A LTR ERV1 1627 1755 0 1971 156 132 5 chr5 113015825 113016203 -90069329 + MSTA LTR MaLR 3 428 0 651 225 25 19 chr5 113016325 113016911 -90068621 + LTR68 LTR ERV1 1 740 0 653 303 41 22 chr5 113016996 113017310 -90068222 + HAL1b LINE L1 245 564 -784 257 359 48 0 chr5 113017426 113017593 -90067939 + HAL1b LINE L1 448 622 -726 265 279 101 32 chr5 113017638 113017796 -90067736 + L1ME LINE L1 5492 5660 -461 282 105 0 0 chr5 113017997 113018035 -90067497 - HERVL18 LTR ERVL -2398 3649 3612 914 113 45 0 chr5 113018088 113018265 -90067267 - L1MA8 LINE L1 -4 6287 6103 1046 117 0 61 chr5 113018265 113018458 -90067074 + L1MA2 LINE L1 6113 6297 -7 2129 166 44 5 chr5 113018468 113018878 -90066654 - L1MA8 LINE L1 -174 6117 5692 1221 259 98 9 chr5 113018878 113019206 -90066326 - LTR18A LTR ERVL 0 357 1 2051 181 0 0 chr5 113019207 113019533 -90065999 - HERVL18 LTR ERVL 0 6047 5722 * 16669 170 18 6 chr5 113019514 113023225 -90062307 - HERVL18 LTR ERVL -2170 3877 1 1238 218 109 56 chr5 113023231 113023309 -90062223 - LTR18A LTR ERVL 0 357 285 2449 75 3 0 chr5 113023309 113023616 -90061916 + AluY SINE Alu 1 308 -3 1238 218 109 56 chr5 113023616 113023876 -90061656 - LTR18A LTR ERVL -72 285 1 212 175 79 0 chr5 113024794 113024857 -90060675 + (TATAA)n Simple_repeat Simple_repeat 4 71 0 965 230 34 0 chr5 113024933 113025137 -90060395 + Tigger2 DNA MER2_type 2508 2718 0 223 373 36 0 chr5 113025261 113025371 -90060161 + MIR3 SINE MIR 72 185 -23 29 28 0 0 chr5 113025606 113025642 -90059890 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 113025679 113025709 -90059823 + AT_rich Low_complexity Low_complexity 1 30 0 255 253 11 11 chr5 113026754 113026845 -90058687 + (TA)n Simple_repeat Simple_repeat 1 91 0 2832 152 7 2 chr5 113027268 113027730 -90057802 - L1PA15 LINE L1 -11 6154 5691 253 160 13 40 chr5 113027730 113027805 -90057727 + L1 LINE L1 4980 5052 -1094 2070 115 7 0 chr5 113028114 113028402 -90057130 + AluSg SINE Alu 1 290 -20 1732 186 16 43 chr5 113028536 113028817 -90056715 - MER46B DNA MER2_type -2495 236 -51 2406 111 31 6 chr5 113028817 113029170 -90056362 - THE1B LTR MaLR 0 364 3 5776 162 85 119 chr5 113029172 113030880 -90054652 - THE1B-int LTR MaLR 0 1651 3 2220 132 40 3 chr5 113030882 113031231 -90054301 - THE1B LTR MaLR 0 364 3 1732 186 16 43 chr5 113031231 113031314 -90054218 - MER46B DNA MER2_type -2646 85 1 2016 126 50 28 chr5 113031849 113032213 -90053319 + THE1C LTR MaLR 1 372 -3 324 48 0 0 chr5 113032213 113032255 -90053277 + (CA)n Simple_repeat Simple_repeat 2 43 0 328 282 32 6 chr5 113033459 113033615 -90051917 + (TA)n Simple_repeat Simple_repeat 2 161 0 1986 73 0 0 chr5 113034478 113034776 -90050756 - AluY SINE Alu 0 334 37 181 316 18 18 chr5 113035038 113035095 -90050437 - L2 LINE L2 -74 3239 3183 264 215 21 11 chr5 113035128 113035221 -90050311 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 238 228 26 16 chr5 113036052 113036252 -90049280 + CT-rich Low_complexity Low_complexity 1 202 0 198 0 0 0 chr5 113036332 113036354 -90049178 + (CAGTA)n Simple_repeat Simple_repeat 5 26 0 240 234 125 16 chr5 113036397 113036461 -90049071 - L2 LINE L2 -2 3311 3241 301 287 97 81 chr5 113036851 113037109 -90048423 - L2 LINE L2 -902 2412 2151 74 73 0 0 chr5 113037162 113037313 -90048219 + AT_rich Low_complexity Low_complexity 1 151 0 202 140 20 20 chr5 113037348 113037398 -90048134 + (TA)n Simple_repeat Simple_repeat 2 51 0 31 0 0 0 chr5 113037406 113037437 -90048095 + AT_rich Low_complexity Low_complexity 1 31 0 6280 205 74 10 chr5 113037634 113039177 -90046355 + L1 LINE L1 3275 4915 -1231 980 160 35 0 chr5 113039177 113039346 -90046186 + AluSg/x SINE Alu 137 311 -1 4783 126 21 37 chr5 113039347 113040162 -90045370 + L1PA16 LINE L1 5324 6125 -41 23 33 0 0 chr5 113040806 113040836 -90044696 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 113044461 113044484 -90041048 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 271 362 92 19 chr5 113046174 113046381 -90039151 - L2 LINE L2 -220 3052 2831 21 36 0 0 chr5 113046861 113046889 -90038643 + AT_rich Low_complexity Low_complexity 1 28 0 532 306 58 27 chr5 113046982 113047240 -90038292 + Charlie8 DNA MER1_type 7 272 -2145 866 221 20 5 chr5 113047367 113047562 -90037970 - MER105 DNA DNA -5 199 2 222 191 0 0 chr5 113048145 113048192 -90037340 + (CA)n Simple_repeat Simple_repeat 2 48 0 303 180 38 60 chr5 113048194 113048377 -90037155 + (TA)n Simple_repeat Simple_repeat 1 179 0 1555 173 221 8 chr5 113048430 113048783 -90036749 + MSTA LTR MaLR 1 428 0 1086 128 53 5 chr5 113048783 113048971 -90036561 + MSTA-int LTR MaLR 1 197 -1454 7775 156 14 34 chr5 113049398 113050781 -90034751 + MSTA-int LTR MaLR 194 1548 -32 1166 193 135 59 chr5 113051331 113051663 -90033869 - MSTD LTR MaLR 0 396 85 1553 171 20 0 chr5 113051663 113051915 -90033617 - AluJo SINE Alu -55 257 1 1166 193 135 59 chr5 113051915 113051992 -90033540 - MSTD LTR MaLR -311 85 15 5111 229 112 34 chr5 113051995 113053601 -90031931 - MSTD-int LTR MaLR 0 1735 4 1012 209 212 30 chr5 113053605 113053940 -90031592 - MSTD LTR MaLR 0 396 1 10061 155 6 4 chr5 113053969 113056460 -90029072 - L1PA10 LINE L1 -16 6152 3646 1892 137 15 30 chr5 113056481 113056818 -90028714 - THE1C LTR MaLR -43 332 1 953 137 0 0 chr5 113056818 113056964 -90028568 + L1P LINE L1 3501 3646 -2500 1158 124 22 44 chr5 113058112 113058289 -90027243 + L1MA8 LINE L1 6062 6234 -57 4174 94 5 3 chr5 113058289 113058892 -90026640 + L1PA7 LINE L1 5539 6143 -11 1158 124 22 44 chr5 113058892 113058939 -90026593 + L1MA8 LINE L1 6234 6281 -10 234 62 0 0 chr5 113059145 113059177 -90026355 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 96 0 0 chr5 113059697 113059770 -90025762 + AT_rich Low_complexity Low_complexity 1 73 0 5539 217 45 16 chr5 113060572 113062822 -90022710 - L1MC1 LINE L1 -1 6332 4028 355 231 0 0 chr5 113063134 113063225 -90022307 + L1MA8 LINE L1 6201 6291 0 2203 100 0 13 chr5 113063732 113064042 -90021490 - AluSc SINE Alu -3 306 1 5510 109 8 0 chr5 113064046 113064846 -90020686 + L1PA13 LINE L1 5355 6160 -3 330 316 45 24 chr5 113064875 113065166 -90020366 - L1M4 LINE L1 -967 5179 4883 499 124 26 88 chr5 113065199 113065312 -90020220 + MER53 DNA DNA 23 128 -61 25 31 0 0 chr5 113065335 113065367 -90020165 + AT_rich Low_complexity Low_complexity 1 32 0 918 223 73 27 chr5 113065613 113065985 -90019547 - MER3 DNA MER1_type 0 2624 2236 446 250 32 0 chr5 113065988 113066112 -90019420 - MER3 DNA MER1_type -41 168 41 2309 61 0 51 chr5 113066316 113066629 -90018903 - AluY SINE Alu -14 297 1 193 226 151 0 chr5 113066809 113066862 -90018670 + MIR3 SINE MIR 148 208 0 4229 191 131 15 chr5 113067234 113068720 -90016812 + MER52A LTR ERV1 1 1755 0 1191 113 0 0 chr5 113068753 113068921 -90016611 - L1P LINE L1 -4303 1843 1676 7032 60 4 2 chr5 113068921 113070162 -90015370 + L1PA8 LINE L1 4926 6168 -4 25 75 0 0 chr5 113070574 113070627 -90014905 + AT_rich Low_complexity Low_complexity 1 53 0 2039 132 7 0 chr5 113071551 113071854 -90013678 - AluSp SINE Alu -8 305 1 407 331 66 25 chr5 113072838 113073080 -90012452 - MIR SINE MIR 0 262 11 1584 184 37 76 chr5 113073082 113073490 -90012042 + MLT2C1 LTR ERVL 6 397 0 26 0 0 0 chr5 113074843 113074869 -90010663 + AT_rich Low_complexity Low_complexity 1 26 0 230 318 23 31 chr5 113074880 113075009 -90010523 + Charlie8 DNA MER1_type 61 188 -2229 23 33 0 0 chr5 113075384 113075414 -90010118 + AT_rich Low_complexity Low_complexity 1 30 0 193 374 37 31 chr5 113076296 113076459 -90009073 + MIR SINE MIR 48 211 -51 24 0 0 0 chr5 113076927 113076951 -90008581 + AT_rich Low_complexity Low_complexity 1 24 0 337 229 89 67 chr5 113077181 113077360 -90008172 + L3 LINE CR1 1242 1424 -153 1012 274 51 34 chr5 113078380 113078793 -90006739 - LTR52 LTR ERVL -1 420 1 850 279 9 14 chr5 113078793 113079008 -90006524 - LTR52-int LTR ERVL 0 3556 3343 2554 298 49 14 chr5 113079057 113080093 -90005439 - LTR52-int LTR ERVL -216 3340 2093 449 283 55 20 chr5 113080128 113080362 -90005170 - LTR52-int LTR ERVL -1393 2163 1916 200 360 61 26 chr5 113080680 113080794 -90004738 - MIR SINE MIR -73 135 18 189 0 0 0 chr5 113081060 113081081 -90004451 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2535 45 0 13 chr5 113081550 113081859 -90003673 + AluY SINE Alu 1 305 -6 590 84 28 84 chr5 113082090 113082197 -90003335 - MSTD LTR MaLR -1 395 295 270 0 0 0 chr5 113083102 113083132 -90002400 + (CA)n Simple_repeat Simple_repeat 1 30 0 337 358 104 10 chr5 113085190 113085349 -90000183 + L1MEc LINE L1 1435 1578 -4818 1140 199 42 83 chr5 113085349 113085735 -89999797 + MLT1A2 LTR MaLR 1 370 -4 337 358 104 10 chr5 113085735 113085863 -89999669 + L1MEc LINE L1 1578 1749 -4647 2030 189 31 11 chr5 113086127 113086571 -89998961 - L1MC3 LINE L1 0 7785 7333 190 304 0 0 chr5 113087153 113087199 -89998333 - L2 LINE L2 -12 3260 3215 402 21 0 0 chr5 113087912 113087959 -89997573 + (TG)n Simple_repeat Simple_repeat 1 47 0 665 147 59 7 chr5 113088905 113089041 -89996491 + MER67D LTR ERV1 1 143 -371 614 142 18 0 chr5 113089151 113089264 -89996268 + CT-rich Low_complexity Low_complexity 3 117 0 1750 146 44 0 chr5 113089268 113089563 -89995969 - AluSx SINE Alu 0 312 5 2496 260 89 43 chr5 113089570 113091195 -89994337 - L1ME LINE L1 -505 5661 3964 1959 199 36 21 chr5 113091821 113092288 -89993244 + L1MB5 LINE L1 5694 6167 -7 28 0 0 0 chr5 113092302 113092330 -89993202 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr5 113093595 113093624 -89991908 + (TG)n Simple_repeat Simple_repeat 1 29 0 5064 255 35 11 chr5 113094220 113095953 -89989579 + L1 LINE L1 1865 3682 -2464 4578 198 32 21 chr5 113095941 113096966 -89988566 + L1PA15 LINE L1 4286 5355 -810 * 2072 120 7 10 chr5 113096966 113097265 -89988267 - AluSq SINE Alu -13 300 3 4578 198 32 21 chr5 113097265 113098083 -89987449 + L1PA15 LINE L1 5355 6163 -2 2317 187 62 0 chr5 113098084 113098538 -89986994 - Tigger1 DNA MER2_type -106 2312 1831 5608 188 70 24 chr5 113098538 113099863 -89985669 + L1MA8 LINE L1 3080 4479 -1667 5789 75 14 4 chr5 113099863 113100650 -89984882 + L1PA8 LINE L1 5378 6172 0 5608 188 70 24 chr5 113100650 113100781 -89984751 + L1MA8 LINE L1 4479 4603 -1543 402 299 82 26 chr5 113101037 113101305 -89984227 - L1M4 LINE L1 -869 5277 4995 1512 253 34 66 chr5 113101407 113101777 -89983755 - L1ME1 LINE L1 -18 6148 5803 2326 90 0 0 chr5 113101777 113102088 -89983444 - AluY SINE Alu 0 311 1 1512 253 34 66 chr5 113102088 113102311 -89983221 - L1ME1 LINE L1 -363 5803 5574 549 137 112 142 chr5 113102378 113102611 -89982921 - L1ME1 LINE L1 -1062 5084 4859 1330 193 0 77 chr5 113102684 113103010 -89982522 + L1MD2 LINE L1 6045 6345 -14 364 285 32 16 chr5 113103690 113103813 -89981719 + L3 LINE CR1 1341 1465 -112 388 259 63 49 chr5 113104225 113104368 -89981164 - MIR SINE MIR -37 225 81 504 147 53 0 chr5 113104416 113104511 -89981021 - LTR23 LTR ERV1 -3 434 335 22110 34 4 1 chr5 113104552 113107286 -89978246 + L1P LINE L1 2402 5142 -1004 1535 151 23 13 chr5 113107414 113107719 -89977813 + L1MA8 LINE L1 4575 4882 -1264 * 2713 178 65 9 chr5 113107716 113108288 -89977244 + L1MA8 LINE L1 5688 6291 0 1854 262 111 25 chr5 113108273 113109927 -89975605 + L1MB8 LINE L1 4351 6161 -17 * 1091 102 0 0 chr5 113109927 113110084 -89975448 + L1PA7 LINE L1 5998 6154 0 41 78 0 0 chr5 113111049 113111139 -89974393 + AT_rich Low_complexity Low_complexity 1 90 0 5079 22 0 0 chr5 113111493 113112082 -89973450 - L1PA3 LINE L1 0 6155 5567 383 333 18 29 chr5 113112672 113112843 -89972689 - MER5A DNA MER1_type -5 184 16 3110 237 13 1 chr5 113112871 113113639 -89971893 - L1PB1 LINE L1 -913 5233 4457 4895 127 16 52 chr5 113113650 113114580 -89970952 + L1PB1 LINE L1 5254 6150 -1 31 44 0 0 chr5 113114580 113114625 -89970907 + AT_rich Low_complexity Low_complexity 1 45 0 185 188 0 0 chr5 113114638 113114670 -89970862 - MIR SINE MIR -72 190 159 1136 273 38 84 chr5 113114974 113115162 -89970370 + LTR40a LTR ERVL 11 206 -313 3090 141 10 10 chr5 113115162 113115659 -89969873 + LOR1a LTR ERV1 1 497 0 1136 273 38 84 chr5 113115659 113116004 -89969528 + LTR40a LTR ERVL 206 519 0 643 182 0 0 chr5 113118034 113118133 -89967399 + FLAM_A SINE Alu 21 119 -23 2031 121 0 17 chr5 113118506 113118804 -89966728 - AluSg SINE Alu -17 293 1 1116 251 84 12 chr5 113119004 113119339 -89966193 + MLT1C LTR MaLR 109 467 0 933 254 71 32 chr5 113120082 113120393 -89965139 + MER119 DNA MER1_type 6 328 -255 539 258 13 7 chr5 113120397 113120548 -89964984 + MER119 DNA MER1_type 429 580 -3 189 0 0 0 chr5 113121699 113121720 -89963812 + (TA)n Simple_repeat Simple_repeat 2 22 0 323 284 197 0 chr5 113121734 113121861 -89963671 + L2 LINE L2 3116 3267 -5 195 358 25 25 chr5 113121820 113121901 -89963631 - L2 LINE L2 -42 3230 3150 * 600 297 49 29 chr5 113124375 113124725 -89960807 + HAL1b LINE L1 248 604 -744 416 247 0 0 chr5 113124822 113124903 -89960629 - MLT1D LTR MaLR -424 81 1 22 35 0 0 chr5 113125015 113125044 -89960488 + AT_rich Low_complexity Low_complexity 1 29 0 257 289 26 70 chr5 113125140 113125254 -89960278 + MIR SINE MIR 23 131 -77 3404 155 25 13 chr5 113125499 113125921 -89959611 + LTR38B LTR ERV1 1 434 -176 2345 102 0 3 chr5 113125921 113126235 -89959297 - AluSq SINE Alu 0 313 1 3404 155 25 13 chr5 113126235 113126407 -89959125 + LTR38B LTR ERV1 434 602 -8 1202 289 35 19 chr5 113126616 113126983 -89958549 + LTR16B LTR ERVL 92 464 0 14630 153 37 28 chr5 113128654 113128852 -89956680 + Tigger2 DNA MER2_type 3 198 -2520 2043 132 28 0 chr5 113128852 113129141 -89956391 + AluSx SINE Alu 2 298 -14 14630 153 37 28 chr5 113129141 113130036 -89955496 + Tigger2 DNA MER2_type 198 1083 -1635 2137 112 16 3 chr5 113130036 113130341 -89955191 + AluSc SINE Alu 1 309 0 14630 153 37 28 chr5 113130341 113131932 -89953600 + Tigger2 DNA MER2_type 1083 2712 -6 237 146 0 0 chr5 113132116 113132164 -89953368 + (TA)n Simple_repeat Simple_repeat 1 48 0 266 269 39 67 chr5 113132229 113132333 -89953199 + MER91B DNA MER1_type 79 179 -11 30 59 0 0 chr5 113132334 113132385 -89953147 + AT_rich Low_complexity Low_complexity 1 51 0 1991 126 14 7 chr5 113132862 113133156 -89952376 + AluSx SINE Alu 1 296 -16 6095 108 3 24 chr5 113133267 113134443 -89951089 - L1PA14 LINE L1 0 6161 5023 2117 123 3 0 chr5 113134443 113134735 -89950797 - AluSx SINE Alu -17 295 3 6095 108 3 24 chr5 113134735 113135542 -89949990 - L1PA14 LINE L1 -1138 5023 4201 7177 32 1 0 chr5 113135828 113136677 -89948855 - L1PA3 LINE L1 0 6155 5306 397 313 143 15 chr5 113136858 113137194 -89948338 + L1ME4a LINE L1 5482 5860 -261 28 29 0 0 chr5 113137194 113137229 -89948303 + AT_rich Low_complexity Low_complexity 1 35 0 188 333 14 0 chr5 113138281 113138350 -89947182 - MIR3 SINE MIR -14 194 125 262 222 0 0 chr5 113139801 113139864 -89945668 + (TA)n Simple_repeat Simple_repeat 1 63 0 509 33 0 0 chr5 113140065 113140126 -89945406 - L1P LINE L1 -1198 4948 4888 7505 32 1 1 chr5 113140126 113141366 -89944166 + L1PA3 LINE L1 4914 6153 -2 892 191 79 30 chr5 113141395 113141662 -89943870 - LTR56 LTR ERV1 -163 282 3 24 0 0 0 chr5 113141832 113141856 -89943676 + AT_rich Low_complexity Low_complexity 1 24 0 195 222 0 0 chr5 113141912 113141957 -89943575 + CT-rich Low_complexity Low_complexity 3 47 0 2185 196 71 25 chr5 113143183 113143662 -89941870 + MLT1D LTR MaLR 1 501 -4 7582 29 0 0 chr5 113143942 113144960 -89940572 + L1PA3 LINE L1 5133 6150 -5 250 223 124 58 chr5 113145522 113145643 -89939889 - L1ME LINE L1 -480 5641 5513 1276 93 0 0 chr5 113145754 113145937 -89939595 + L1MA2 LINE L1 6121 6303 -1 227 200 0 0 chr5 113145940 113145990 -89939542 + A-rich Low_complexity Low_complexity 1 50 0 203 172 52 0 chr5 113147437 113147495 -89938037 + (TA)n Simple_repeat Simple_repeat 2 62 0 491 271 25 0 chr5 113147591 113147713 -89937819 + FLAM_A SINE Alu 1 125 -8 4756 216 62 25 chr5 113147845 113149272 -89936260 + L1MC3 LINE L1 5101 5403 -743 3659 212 46 17 chr5 113149286 113150176 -89935356 + L1MC3 LINE L1 6745 7660 -125 190 291 55 55 chr5 113150791 113150901 -89934631 + L3 LINE CR1 1396 1505 -72 187 260 20 20 chr5 113151110 113151160 -89934372 + L3b LINE CR1 1528 1577 -6 21 82 0 0 chr5 113151254 113151303 -89934229 + AT_rich Low_complexity Low_complexity 1 49 0 1250 353 231 0 chr5 113152004 113152429 -89933103 - L1MA9 LINE L1 -141 6171 5649 248 133 44 0 chr5 113152473 113152518 -89933014 - L1MA9 LINE L1 -852 5482 5436 1492 137 33 83 chr5 113152550 113152850 -89932682 - AluJb SINE Alu -19 293 9 1639 181 56 40 chr5 113152899 113153275 -89932257 - L1PA16 LINE L1 -16 6150 5769 12920 224 21 40 chr5 113153295 113155696 -89929836 - L1PA16 LINE L1 0 7604 5160 853 114 7 29 chr5 113155696 113155836 -89929696 - L1PA14 LINE L1 -9 6152 6016 12920 224 21 40 chr5 113155836 113158924 -89926608 - L1PA16 LINE L1 -2444 5160 2182 631 365 44 43 chr5 113159377 113159985 -89925547 - L1PA16 LINE L1 -6177 1397 789 990 196 15 5 chr5 113159994 113160193 -89925339 - L1P4 LINE L1 -384 5782 5582 2026 184 62 13 chr5 113160193 113160577 -89924955 + MSTB LTR MaLR 1 403 -23 1296 171 31 18 chr5 113160577 113160805 -89924727 + MER1B DNA MER1_type 1 231 -66 3299 191 39 12 chr5 113160906 113161897 -89923635 - L1P4 LINE L1 -595 5570 4525 324 356 51 6 chr5 113162235 113162412 -89923120 + MIR SINE MIR 69 253 -9 2094 121 10 10 chr5 113162513 113162811 -89922721 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 113163263 113163287 -89922245 + AT_rich Low_complexity Low_complexity 1 24 0 291 246 101 45 chr5 113163744 113163923 -89921609 + MER67D LTR ERV1 13 201 -313 1703 167 21 9 chr5 113163977 113164307 -89921225 + L1MA9 LINE L1 5977 6310 -2 285 218 0 0 chr5 113164348 113164403 -89921129 + MER3 DNA MER1_type 36 90 -119 * 1072 147 30 20 chr5 113164370 113164567 -89920965 - MER3 DNA MER1_type -10 199 1 1154 180 21 17 chr5 113164727 113164960 -89920572 + MER67C LTR ERV1 170 403 -307 284 271 203 8 chr5 113164970 113165103 -89920429 + MER67D LTR ERV1 356 514 0 317 252 61 9 chr5 113165108 113165223 -89920309 - L1MCa LINE L1 -6304 122 2 * 734 277 83 41 chr5 113165217 113165381 -89920151 + L1M4 LINE L1 2610 2766 -3380 2087 132 3 3 chr5 113165381 113165685 -89919847 + AluSc SINE Alu 1 304 -5 734 277 83 41 chr5 113165685 113165742 -89919790 + L1M4 LINE L1 2766 2819 -3327 2269 88 0 0 chr5 113165742 113166057 -89919475 + AluY SINE Alu 1 315 0 734 277 83 41 chr5 113166057 113166316 -89919216 + L1M4 LINE L1 2819 3112 -3034 393 280 0 0 chr5 113167286 113167379 -89918153 + MER34 LTR ERV1 144 236 -306 730 228 76 19 chr5 113167415 113167626 -89917906 + MER34 LTR ERV1 320 542 0 191 308 51 13 chr5 113167798 113167876 -89917656 + MIR3 SINE MIR 125 205 -3 336 291 20 61 chr5 113168994 113169142 -89916390 - L2 LINE L2 -1 3312 3171 22 0 0 0 chr5 113169261 113169283 -89916249 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 113169476 113169525 -89916007 + AT_rich Low_complexity Low_complexity 1 49 0 3257 186 2 3 chr5 113169567 113170173 -89915359 - MER6A DNA MER2_type 0 605 1 1818 178 28 50 chr5 113170363 113170762 -89914770 - MLT1B LTR MaLR 0 390 1 226 188 0 31 chr5 113170765 113170829 -89914703 + CT-rich Low_complexity Low_complexity 2 63 0 23381 77 10 2 chr5 113171304 113175281 -89910251 - L1PA6 LINE L1 0 6154 2147 2047 143 0 0 chr5 113175353 113175654 -89909878 - AluSx SINE Alu -11 301 1 22 80 0 0 chr5 113175697 113175747 -89909785 + AT_rich Low_complexity Low_complexity 1 50 0 754 282 62 43 chr5 113176461 113176625 -89908907 - LTR33A LTR ERVL 0 523 364 3272 175 46 11 chr5 113176625 113177294 -89908238 - L1MA9 LINE L1 -1 6311 5619 754 282 62 43 chr5 113177294 113177640 -89907892 - LTR33A LTR ERVL -159 364 2 22 35 0 0 chr5 113178399 113178428 -89907104 + AT_rich Low_complexity Low_complexity 1 29 0 2402 57 0 0 chr5 113178592 113178890 -89906642 - AluY SINE Alu -13 298 1 192 208 19 57 chr5 113178942 113178995 -89906537 + L3b LINE CR1 1349 1399 -184 324 318 92 73 chr5 113179417 113179854 -89905678 + L2 LINE L2 2822 3266 -47 21 36 0 0 chr5 113180028 113180056 -89905476 + AT_rich Low_complexity Low_complexity 1 28 0 1189 219 0 5 chr5 113180365 113180580 -89904952 - MER8 DNA MER2_type -25 214 1 1576 274 84 40 chr5 113180724 113181482 -89904050 - L1ME1 LINE L1 -48 6118 5327 453 249 107 5 chr5 113182083 113182280 -89903252 + L1M4 LINE L1 1492 1708 -4834 374 284 0 0 chr5 113182331 113182440 -89903092 + L1M4 LINE L1 2781 2889 -3755 1869 109 17 17 chr5 113182566 113182868 -89902664 - L1PA14 LINE L1 -1 6160 5859 1119 166 10 10 chr5 113182892 113183091 -89902441 + MLT1C LTR MaLR 269 467 0 11296 227 30 25 chr5 113184533 113184564 -89900968 - L1PA13 LINE L1 -3920 2877 2848 12579 200 19 17 chr5 113184564 113186773 -89898759 - L1PA13 LINE L1 -2 6161 3927 2229 78 0 39 chr5 113186773 113187080 -89898452 - AluY SINE Alu -16 295 1 12579 200 19 17 chr5 113187080 113188555 -89896977 - L1PA13 LINE L1 -2236 3927 2457 11296 227 30 25 chr5 113188555 113190111 -89895421 - L1PA13 LINE L1 -3949 2848 1215 212 59 29 0 chr5 113190111 113190145 -89895387 + (CAG)n Simple_repeat Simple_repeat 2 36 0 11296 227 30 25 chr5 113190145 113191366 -89894166 - L1PA13 LINE L1 -5582 1215 1 554 307 39 79 chr5 113191480 113191861 -89893671 + MLT1I LTR MaLR 20 385 -24 23 33 0 0 chr5 113192128 113192158 -89893374 + AT_rich Low_complexity Low_complexity 1 30 0 2038 138 19 26 chr5 113192682 113193060 -89892472 + THE1C LTR MaLR 1 375 0 30 27 0 0 chr5 113194784 113194821 -89890711 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr5 113195692 113195718 -89889814 + AT_rich Low_complexity Low_complexity 1 26 0 7217 42 25 0 chr5 113195718 113196666 -89888866 - L1PA7 LINE L1 -3 6151 5200 932 249 42 75 chr5 113196738 113197183 -89888349 - L1M3f LINE L1 -4774 554 14 2549 215 31 23 chr5 113197199 113197897 -89887635 - L1 LINE L1 -1821 4561 3858 686 233 18 2 chr5 113197897 113198068 -89887464 - MLT1A1 LTR MaLR 0 382 211 1600 264 76 49 chr5 113198072 113198264 -89887268 - L1 LINE L1 -3773 2609 2424 2321 93 0 0 chr5 113198264 113198565 -89886967 - AluY SINE Alu -10 301 1 1600 264 76 49 chr5 113198565 113199726 -89885806 - L1 LINE L1 -3958 2424 1126 1385 198 0 4 chr5 113199738 113199976 -89885556 - MSTC LTR MaLR 0 428 192 12762 174 26 17 chr5 113199979 113203306 -89882226 + L1MA2 LINE L1 2561 5922 -382 937 156 16 11 chr5 113203406 113203592 -89881940 + L1MA2 LINE L1 6118 6304 0 508 180 30 0 chr5 113203638 113203738 -89881794 - MSTC LTR MaLR -259 169 67 222 143 24 0 chr5 113204166 113204208 -89881324 - L2 LINE L2 0 3272 3230 1139 246 92 7 chr5 113204790 113205201 -89880331 - L1M3c LINE L1 -4792 1349 904 714 381 36 6 chr5 113205478 113205840 -89879692 - L1M3c LINE L1 -5768 373 1 5348 137 46 69 chr5 113306106 113306541 -89778991 + L1M1 LINE L1 2211 2654 -4911 2120 133 7 0 chr5 113306541 113306849 -89778683 + AluSx SINE Alu 1 310 -2 5348 137 46 69 chr5 113306849 113307648 -89777884 + L1M1 LINE L1 2654 3417 -4148 618 249 62 11 chr5 113307819 113307996 -89777536 + MLT1F LTR MaLR 345 530 -12 390 164 0 0 chr5 113307991 113308058 -89777474 + MLT1F LTR MaLR 501 567 0 * 378 277 95 34 chr5 113308067 113308215 -89777317 - MIR SINE MIR -104 158 2 1587 182 16 35 chr5 113308333 113308651 -89776881 + AluJo SINE Alu 1 312 0 1663 202 113 44 chr5 113308840 113309344 -89776188 - LTR55 LTR ERV -9 539 1 551 43 0 0 chr5 113309612 113309682 -89775850 + L1PA5 LINE L1 6079 6148 -6 275 257 122 0 chr5 113310242 113310316 -89775216 - MLT1I LTR MaLR -256 153 71 330 141 31 0 chr5 113310406 113310470 -89775062 - MLT1D LTR MaLR 0 505 440 442 331 131 58 chr5 113310733 113311402 -89774130 + L2 LINE L2 2346 3071 -201 221 164 18 36 chr5 113312334 113312389 -89773143 + (CATAT)n Simple_repeat Simple_repeat 2 55 0 686 274 66 16 chr5 113312403 113312721 -89772811 + L1MC4a LINE L1 5717 6050 -1758 7289 40 1 0 chr5 113312902 113313786 -89771746 - L1PA4 LINE L1 -4 6151 5267 293 250 98 53 chr5 113315328 113315460 -89770072 + MIR SINE MIR 48 185 -77 1527 161 76 10 chr5 113315541 113315832 -89769700 - AluJb SINE Alu -2 310 1 428 178 42 51 chr5 113315888 113316006 -89769526 + MER112 DNA MER1_type 31 147 -113 446 240 32 32 chr5 113316007 113316132 -89769400 + L2 LINE L2 3176 3300 -13 2113 124 0 0 chr5 113316236 113316545 -89768987 - AluSx SINE Alu 0 309 1 2506 84 62 0 chr5 113316726 113317081 -89768451 + MER51B LTR ERV1 1 377 0 676 282 14 38 chr5 113317992 113318279 -89767253 + HAL1b LINE L1 275 554 -794 507 179 0 0 chr5 113318555 113318633 -89766899 - MER2 DNA MER2_type 0 345 268 1074 161 31 0 chr5 113318664 113318856 -89766676 - MER2 DNA MER2_type -136 209 12 331 229 31 31 chr5 113318993 113319089 -89766443 - Zaphod DNA AcHobo 0 4031 3936 7503 27 0 0 chr5 113320669 113321929 -89763603 - L1PA3 LINE L1 -15 6140 4880 414 351 14 67 chr5 113321990 113322198 -89763334 - MER115 DNA AcHobo -318 375 179 677 310 40 35 chr5 113322349 113322968 -89762564 + L1ME3 LINE L1 5255 5890 -280 277 333 39 32 chr5 113323284 113323440 -89762092 - MLT1L LTR MaLR -416 199 43 389 332 62 42 chr5 113323560 113323758 -89761774 - L2 LINE L2 -831 2483 2275 2299 100 0 0 chr5 113323758 113324049 -89761483 + AluY SINE Alu 5 295 -16 389 332 62 42 chr5 113324049 113324157 -89761375 - L2 LINE L2 -1039 2275 2171 4016 192 16 33 chr5 113324313 113325272 -89760260 - L1M2 LINE L1 -4470 3096 2155 33 25 0 0 chr5 113326571 113326611 -89758921 + AT_rich Low_complexity Low_complexity 1 40 0 403 298 155 18 chr5 113326681 113327010 -89758522 - L1MC/D LINE L1 -2136 5672 5299 1922 144 37 3 chr5 113327938 113328237 -89757295 + AluSx SINE Alu 1 309 -3 359 269 51 102 chr5 113328363 113328579 -89756953 + HAL1b LINE L1 4 208 -1140 183 261 225 27 chr5 113328970 113329081 -89756451 + MIR SINE MIR 122 254 -8 221 232 0 80 chr5 113329477 113329615 -89755917 + (CATA)n Simple_repeat Simple_repeat 2 128 0 23 33 0 0 chr5 113329786 113329816 -89755716 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 113330045 113330082 -89755450 + AT_rich Low_complexity Low_complexity 1 37 0 8713 225 51 33 chr5 113330128 113331393 -89754139 - L1MD1 LINE L1 -326 6310 5069 1662 155 120 23 chr5 113331393 113331735 -89753797 + THE1C LTR MaLR 1 375 0 8713 225 51 33 chr5 113331735 113332921 -89752611 - L1MD1 LINE L1 -1567 5069 3905 587 90 0 0 chr5 113332921 113332999 -89752533 + MADE1 DNA Mariner 1 78 -2 8713 225 51 33 chr5 113332999 113334513 -89751019 - L1MD1 LINE L1 -2731 3905 2297 2594 259 109 20 chr5 113334506 113335313 -89750219 - L1MD1 LINE L1 -5498 1042 164 * 436 321 55 44 chr5 113335409 113335702 -89749830 + ERVL LTR ERVL 4900 5195 -569 5031 198 80 10 chr5 113336344 113337444 -89748088 - L1M2 LINE L1 -6374 1191 15 215 157 20 0 chr5 113337526 113337577 -89747955 + (TATG)n Simple_repeat Simple_repeat 1 52 0 351 286 91 36 chr5 113337618 113337679 -89747853 + L1ME3A LINE L1 5680 5736 -434 2502 51 0 0 chr5 113337679 113337974 -89747558 + AluY SINE Alu 1 295 -16 351 286 91 36 chr5 113337974 113338164 -89747368 + L1ME3A LINE L1 5736 5945 -225 36 23 0 0 chr5 113338319 113338362 -89747170 + AT_rich Low_complexity Low_complexity 1 43 0 34 0 0 0 chr5 113338563 113338597 -89746935 + AT_rich Low_complexity Low_complexity 1 34 0 339 322 20 20 chr5 113339162 113339311 -89746221 + MIR SINE MIR 114 262 0 1404 175 58 8 chr5 113339636 113339893 -89745639 - AluJb SINE Alu -16 296 27 488 279 107 37 chr5 113340076 113340141 -89745391 + MLT1J LTR MaLR 1 60 -555 219 36 0 0 chr5 113340141 113340169 -89745363 + (TTG)n Simple_repeat Simple_repeat 2 29 0 488 279 107 37 chr5 113340169 113340511 -89745021 + MLT1J LTR MaLR 60 535 -80 2511 62 7 0 chr5 113341529 113341838 -89743694 - AluY SINE Alu 0 311 1 1077 62 0 0 chr5 113341841 113341969 -89743563 - AluSg SINE Alu -180 130 3 365 342 72 54 chr5 113342138 113342734 -89742798 + L2 LINE L2 1499 2105 -1209 303 122 0 0 chr5 113342736 113342785 -89742747 + (TC)n Simple_repeat Simple_repeat 2 50 0 333 316 21 0 chr5 113342921 113343016 -89742516 - L2 LINE L2 -2 3311 3215 233 181 24 36 chr5 113343053 113343136 -89742396 + (TTTA)n Simple_repeat Simple_repeat 3 84 0 255 223 43 53 chr5 113343270 113343364 -89742168 - L1ME LINE L1 -459 5662 5570 2208 98 0 35 chr5 113343378 113343695 -89741837 + AluY SINE Alu 1 306 -5 1090 269 109 37 chr5 113344393 113345668 -89739864 + L1MEc LINE L1 1544 2935 -3605 398 277 56 45 chr5 113345679 113346112 -89739420 + L1MEc LINE L1 789 1188 -5017 244 254 45 0 chr5 113346128 113346195 -89739337 + MLT1E3 LTR MaLR 1 70 -584 2432 148 33 35 chr5 113346215 113346701 -89738831 + MER66B LTR ERV1 2 486 0 1576 289 29 26 chr5 113346732 113347185 -89738347 + MLT1E3 LTR MaLR 140 593 -31 1482 141 67 37 chr5 113347185 113347484 -89738048 - MER44D DNA MER2_type 0 609 32 265 252 102 27 chr5 113347589 113347736 -89737796 + L1MEc LINE L1 1282 1439 -4776 235 235 49 25 chr5 113347777 113347858 -89737674 + L1MEc LINE L1 1545 1627 -4588 22 56 0 0 chr5 113348623 113348659 -89736873 + AT_rich Low_complexity Low_complexity 1 36 0 2206 122 228 18 chr5 113349148 113349599 -89735933 - MER52C LTR ERV1 0 1278 733 315 49 0 0 chr5 113350388 113350429 -89735103 + (TG)n Simple_repeat Simple_repeat 2 42 0 1836 166 0 0 chr5 113350438 113350727 -89734805 - AluJb SINE Alu -23 289 1 1190 72 0 30 chr5 113350742 113350909 -89734623 + MER4E LTR ERV1 1 162 -617 1686 191 0 16 chr5 113351028 113351342 -89734190 + AluJb SINE Alu 4 312 0 35 63 0 0 chr5 113351477 113351540 -89733992 + AT_rich Low_complexity Low_complexity 1 63 0 525 214 83 0 chr5 113351802 113351947 -89733585 - L1MA10 LINE L1 -1 6333 6177 385 217 132 33 chr5 113351973 113352125 -89733407 - L1ME1 LINE L1 -132 6270 6104 1341 246 86 10 chr5 113352137 113352863 -89732669 - L1ME1 LINE L1 -484 5918 5138 5429 204 21 15 chr5 113352867 113353162 -89732370 + L1PB4 LINE L1 4074 4366 -1790 1748 167 0 3 chr5 113353162 113353449 -89732083 + AluSq SINE Alu 1 286 -27 5429 204 21 15 chr5 113353449 113353462 -89732070 + L1PB4 LINE L1 4366 4377 -1779 318 26 0 0 chr5 113353462 113353501 -89732031 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 5429 204 21 15 chr5 113353501 113354888 -89730644 + L1PB4 LINE L1 4377 5788 -368 192 97 0 0 chr5 113354888 113354919 -89730613 + (TA)n Simple_repeat Simple_repeat 2 32 0 5429 204 21 15 chr5 113354919 113355290 -89730242 + L1PB4 LINE L1 5788 6155 -1 1415 257 76 25 chr5 113355298 113356261 -89729271 - L1ME1 LINE L1 -3386 2996 1931 431 219 10 0 chr5 113356361 113356457 -89729075 - L1ME1 LINE L1 -4603 1960 1864 1438 98 31 18 chr5 113356459 113356683 -89728849 + AluSq SINE Alu 69 295 -18 548 280 88 34 chr5 113356690 113356868 -89728664 - L1ME1 LINE L1 -4725 1659 1492 209 81 0 27 chr5 113356868 113356905 -89728627 + (TATATG)n Simple_repeat Simple_repeat 2 37 0 548 280 88 34 chr5 113356905 113357258 -89728274 - L1ME1 LINE L1 -4892 1492 1179 233 333 52 47 chr5 113357763 113357976 -89727556 - L1ME1 LINE L1 -5855 517 304 210 171 0 0 chr5 113359246 113359287 -89726245 + GA-rich Low_complexity Low_complexity 3 43 0 12901 152 12 114 chr5 113359520 113362674 -89722858 + L1P LINE L1 29 2861 -3285 1786 128 26 35 chr5 113362884 113363197 -89722335 + AluSx SINE Alu 1 310 -2 682 278 69 25 chr5 113363314 113363559 -89721973 + L1MEc LINE L1 270 525 -5871 1850 232 63 70 chr5 113363564 113364296 -89721236 + L1MEc LINE L1 1634 2370 -4026 1882 137 7 0 chr5 113364296 113364573 -89720959 + AluSx SINE Alu 1 279 -33 198 0 0 0 chr5 113364578 113364600 -89720932 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1850 232 63 70 chr5 113364600 113364700 -89720832 + L1MEc LINE L1 2374 2466 -3930 392 265 173 12 chr5 113364669 113364918 -89720614 + L1MEc LINE L1 3436 3724 -2491 * 270 335 20 81 chr5 113364921 113365118 -89720414 + L3 LINE CR1 426 610 -967 784 128 0 183 chr5 113365148 113365383 -89720149 + 7SK RNA RNA 2 193 0 481 329 127 14 chr5 113365444 113365736 -89719796 - MLT1J2 LTR MaLR -125 325 1 609 353 79 13 chr5 113365924 113366304 -89719228 + L3 LINE CR1 992 1396 -181 1096 160 125 150 chr5 113366308 113366788 -89718744 + Charlie1b DNA MER1_type 6 473 -50 185 0 0 39 chr5 113366788 113366814 -89718718 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 260 204 0 0 chr5 113366842 113366896 -89718636 + Charlie1b DNA MER1_type 466 519 -4 338 361 107 0 chr5 113366900 113367069 -89718463 + L3 LINE CR1 1388 1574 -3 1902 119 39 53 chr5 113367575 113367912 -89717620 - MER1B DNA MER1_type -5 334 3 418 219 84 8 chr5 113368882 113368927 -89716605 + L1ME1 LINE L1 6035 6075 -91 2960 192 20 12 chr5 113368927 113369527 -89716005 - MER6A DNA MER2_type 0 605 1 418 219 84 8 chr5 113369527 113369600 -89715932 + L1ME1 LINE L1 6075 6162 -4 618 268 82 11 chr5 113369700 113369883 -89715649 + MIR SINE MIR 64 259 -3 501 301 87 47 chr5 113369872 113370171 -89715361 - L2 LINE L2 0 3313 3003 * 253 308 68 15 chr5 113370192 113370325 -89715207 - L2 LINE L2 -498 2816 2677 1249 233 106 48 chr5 113370367 113370800 -89714732 - MLT1J LTR MaLR -13 498 41 1655 173 14 10 chr5 113370988 113371283 -89714249 - AluJb SINE Alu -4 308 13 1531 166 35 54 chr5 113372261 113372634 -89712898 + MLT2D LTR ERVL 1 366 -48 204 40 0 0 chr5 113372634 113372659 -89712873 + (CA)n Simple_repeat Simple_repeat 2 26 0 285 128 0 0 chr5 113372659 113372706 -89712826 + (GA)n Simple_repeat Simple_repeat 1 47 0 242 118 0 0 chr5 113372706 113372740 -89712792 + MLT2D LTR ERVL 423 456 -8 241 365 69 7 chr5 113372746 113372891 -89712641 + L2 LINE L2 2497 2650 -664 2514 230 78 17 chr5 113372957 113373904 -89711628 + L1MC4 LINE L1 6976 8037 -5 526 334 161 26 chr5 113373941 113374252 -89711280 + L2 LINE L2 2736 3118 -195 198 71 0 0 chr5 113374252 113374280 -89711252 + (CA)n Simple_repeat Simple_repeat 1 28 0 526 334 161 26 chr5 113374280 113374386 -89711146 + L2 LINE L2 3118 3208 -105 628 219 7 27 chr5 113374579 113374725 -89710807 + MLT1E LTR MaLR 1 143 -450 1481 244 39 15 chr5 113374728 113375134 -89710398 + L1MD3 LINE L1 7410 7825 -170 761 201 97 0 chr5 113375166 113375320 -89710212 - FRAM SINE Alu -5 171 3 2886 180 6 0 chr5 113376061 113376611 -89708921 - L1 LINE L1 -909 6656 6104 * 4799 200 15 3 chr5 113376604 113377857 -89707675 - L1 LINE L1 -2909 4656 3387 16547 95 4 2 chr5 113377981 113380942 -89704590 + L1PA8 LINE L1 2976 5944 -228 244 213 12 25 chr5 113380943 113381023 -89704509 + A-rich Low_complexity Low_complexity 6 84 0 2905 168 6 2 chr5 113381191 113381696 -89703836 + L1MC3 LINE L1 7213 7719 -66 219 69 0 0 chr5 113381709 113381738 -89703794 + (TA)n Simple_repeat Simple_repeat 1 29 0 1984 139 13 10 chr5 113381738 113382041 -89703491 - AluSx SINE Alu -8 304 1 17437 190 25 16 chr5 113382378 113387706 -89697826 - L1PA13 LINE L1 -12 6802 1210 384 187 53 0 chr5 113387701 113387776 -89697756 - L1PA13 LINE L1 -5037 1750 1672 * 439 217 156 27 chr5 113387759 113387987 -89697545 - L1MEc LINE L1 -3772 2451 2232 11439 32 5 1 chr5 113388124 113390117 -89695415 - L1PA3 LINE L1 -161 5994 3997 4256 41 0 0 chr5 113390114 113390629 -89694903 + L1P LINE L1 3559 4073 -2073 * 3000 203 106 39 chr5 113390624 113391820 -89693712 + L1MB2 LINE L1 4892 6169 -2 * 3580 172 70 50 chr5 113392343 113392524 -89693008 - MER21A LTR ERV1 -9 922 746 2074 130 20 20 chr5 113392524 113392879 -89692653 - THE1A LTR MaLR 0 355 1 11044 104 13 3 chr5 113392879 113394443 -89691089 - THE1A-int LTR MaLR 0 1580 1 2238 111 20 11 chr5 113394443 113394795 -89690737 - THE1A LTR MaLR 0 355 1 3580 172 70 50 chr5 113394795 113395467 -89690065 - MER21A LTR ERV1 -184 747 9 216 162 0 0 chr5 113395467 113395504 -89690028 + (TG)n Simple_repeat Simple_repeat 2 38 0 1911 190 20 0 chr5 113395749 113396107 -89689425 - MER47A DNA MER2_type 0 366 2 21 0 0 0 chr5 113396368 113396389 -89689143 + AT_rich Low_complexity Low_complexity 1 21 0 407 227 57 23 chr5 113397116 113397204 -89688328 + Tigger3(Golem) DNA MER2_type 1 91 -2938 * 3947 116 27 147 chr5 113397203 113397375 -89688157 + Tigger3(Golem) DNA MER2_type 1925 2116 -913 1622 169 95 0 chr5 113397375 113397659 -89687873 + AluSx SINE Alu 1 311 -1 3947 116 27 147 chr5 113397659 113398457 -89687075 + Tigger3(Golem) DNA MER2_type 2116 2778 -251 571 131 180 41 chr5 113398458 113398580 -89686952 + Tigger3(Golem) DNA MER2_type 2889 3027 -2 503 128 108 39 chr5 113398723 113398825 -89686707 - Tigger3(Golem) DNA MER2_type -1 3028 2920 2224 173 90 34 chr5 113398845 113399343 -89686189 - Tigger3(Golem) DNA MER2_type -2503 526 1 577 199 0 0 chr5 113399510 113399637 -89685895 - L1P LINE L1 -807 5349 5223 1422 132 13 0 chr5 113399637 113399865 -89685667 + L1P4 LINE L1 5388 5618 -547 27 29 0 0 chr5 113400827 113400861 -89684671 + AT_rich Low_complexity Low_complexity 1 34 0 1273 144 7 78 chr5 113400984 113401121 -89684411 + AluSx SINE Alu 1 111 -201 1989 139 3 0 chr5 113401121 113401416 -89684116 + AluSx SINE Alu 1 296 -16 1273 144 7 78 chr5 113401416 113401549 -89683983 + AluSx SINE Alu 111 252 -60 2157 117 0 9 chr5 113403204 113403520 -89682012 + AluSq SINE Alu 1 313 0 505 195 153 9 chr5 113404829 113404983 -89680549 + MSTB1 LTR MaLR 1 199 -231 604 176 92 0 chr5 113404983 113405102 -89680430 + FLAM_C SINE Alu 1 130 -13 1186 159 52 17 chr5 113405102 113405334 -89680198 + MSTB1 LTR MaLR 193 432 0 290 312 252 12 chr5 113406305 113406638 -89678894 - L2 LINE L2 -3 3310 2898 500 292 193 14 chr5 113406681 113407106 -89678426 - L2 LINE L2 -505 2809 2309 280 318 32 16 chr5 113407166 113407292 -89678240 - L1ME LINE L1 -475 5646 5519 180 295 148 74 chr5 113407439 113407475 -89678057 - MIR3 SINE MIR -21 187 155 2083 109 0 50 chr5 113407475 113407796 -89677736 + AluSg SINE Alu 1 305 -5 180 295 148 74 chr5 113407796 113407881 -89677651 - MIR3 SINE MIR -53 155 57 26 74 0 0 chr5 113408226 113408280 -89677252 + AT_rich Low_complexity Low_complexity 1 54 0 2234 112 0 0 chr5 113409743 113410046 -89675486 + AluSx SINE Alu 1 303 -9 402 134 0 0 chr5 113410056 113410123 -89675409 + (TG)n Simple_repeat Simple_repeat 2 68 0 289 278 42 14 chr5 113410170 113410242 -89675290 - MER5A DNA MER1_type -73 116 43 234 304 0 0 chr5 113410962 113411018 -89674514 + L2 LINE L2 3250 3305 -8 1103 260 44 14 chr5 113411613 113411909 -89673623 + LTR40a LTR ERVL 210 514 -5 635 321 1 29 chr5 113411971 113412363 -89673169 + HERVL40 LTR ERVL 223 570 -4960 385 254 9 53 chr5 113412404 113412518 -89673014 + HERVL40 LTR ERVL 568 676 -4854 24 53 0 0 chr5 113412622 113412660 -89672872 + AT_rich Low_complexity Low_complexity 1 38 0 2672 312 75 47 chr5 113412681 113412878 -89672654 + HERVL40 LTR ERVL 1600 1790 -3740 2301 91 3 3 chr5 113412878 113413175 -89672357 + AluSp SINE Alu 3 299 -14 2672 312 75 47 chr5 113413175 113414222 -89671310 + HERVL40 LTR ERVL 1790 2880 -2650 473 326 62 26 chr5 113414390 113414697 -89670835 + MER89-int LTR ERV1 6175 6492 -309 * 699 219 94 5 chr5 113414593 113414879 -89670653 + HERVL40 LTR ERVL 2796 5495 -35 279 272 120 70 chr5 113415222 113415564 -89669968 + L1MC4a LINE L1 5557 5915 -1893 22 35 0 0 chr5 113415798 113415827 -89669705 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 113416046 113416082 -89669450 + AT_rich Low_complexity Low_complexity 1 36 0 277 23 23 23 chr5 113416169 113416212 -89669320 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 381 316 86 37 chr5 113416828 113417137 -89668395 - L1ME LINE L1 -301 5820 5508 493 269 200 40 chr5 113417240 113417499 -89668033 + MLT1G1 LTR MaLR 57 359 -171 2192 138 104 5 chr5 113417499 113417935 -89667597 + MER1A DNA MER1_type 1 529 0 522 227 94 0 chr5 113417937 113418065 -89667467 + MLT1G1 LTR MaLR 449 588 -7 451 274 101 30 chr5 113418671 113418999 -89666533 - L1ME LINE L1 -1313 4833 4483 255 160 19 66 chr5 113419085 113419191 -89666341 + T-rich Low_complexity Low_complexity 5 105 0 24 32 0 0 chr5 113419261 113419292 -89666240 + AT_rich Low_complexity Low_complexity 1 31 0 180 77 0 0 chr5 113419582 113419608 -89665924 + (TG)n Simple_repeat Simple_repeat 1 26 0 361 340 77 0 chr5 113419614 113419770 -89665762 + MIR SINE MIR 81 248 -14 280 241 84 0 chr5 113419828 113419911 -89665621 - MER5A DNA MER1_type -2 187 98 1105 55 0 0 chr5 113420069 113420197 -89665335 + AluSg SINE Alu 7 134 -176 2188 112 3 3 chr5 113420197 113420500 -89665032 + AluY SINE Alu 1 303 -8 15820 233 25 26 chr5 113422043 113424035 -89661497 - L1PA15 LINE L1 -3 7601 5608 2093 117 7 3 chr5 113424035 113424333 -89661199 - AluSg SINE Alu -11 299 1 15820 233 25 26 chr5 113424333 113426673 -89658859 - L1PA15 LINE L1 -1996 5608 3266 2424 63 0 0 chr5 113426673 113426957 -89658575 - AluY SINE Alu -18 293 10 15820 233 25 26 chr5 113426957 113429209 -89656323 - L1PA15 LINE L1 -4338 3266 8 1111 176 131 5 chr5 113430473 113430695 -89654837 + AluJb SINE Alu 61 310 -2 1468 253 75 91 chr5 113430717 113431454 -89654078 - L1M4 LINE L1 -5333 1522 798 461 301 48 0 chr5 113431601 113431813 -89653719 - L1M4 LINE L1 -6335 520 94 246 32 0 0 chr5 113432327 113432358 -89653174 + (TA)n Simple_repeat Simple_repeat 1 31 0 11990 36 3 0 chr5 113433166 113434628 -89650904 + L1P LINE L1 3722 5188 -958 883 207 25 4 chr5 113434732 113434974 -89650558 - L1 LINE L1 -1590 4556 4310 1076 135 10 10 chr5 113434977 113435170 -89650362 - L1PB2 LINE L1 0 6793 6601 3612 71 0 2 chr5 113435182 113435649 -89649883 - L1PA6 LINE L1 -11 6143 5678 36018 96 12 9 chr5 113435651 113440861 -89644671 - L1PA6 LINE L1 -918 5228 1 14222 223 14 8 chr5 113440859 113445281 -89640251 - L1PB2 LINE L1 -177 6616 2087 * 1407 197 10 2 chr5 113445284 113445720 -89639812 + L1PBa LINE L1 1 981 -5223 21544 147 19 7 chr5 113445739 113446444 -89639088 + MER41-int LTR ERV1 1 696 -7060 306 0 0 0 chr5 113446444 113446478 -89639054 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 21544 147 19 7 chr5 113446478 113449214 -89636318 + MER41-int LTR ERV1 696 3484 -4272 586 64 0 0 chr5 113449217 113449338 -89636194 - AluY SINE Alu 0 325 205 694 164 45 0 chr5 113449439 113449573 -89635959 - AluSg/x SINE Alu -39 271 132 2368 92 0 0 chr5 113449573 113449876 -89635656 - AluSg SINE Alu -7 303 1 4427 193 27 7 chr5 113449889 113450730 -89634802 + MER41-int LTR ERV1 3494 4351 -3405 21702 117 16 7 chr5 113450817 113454052 -89631480 + MER41-int LTR ERV1 4358 7620 -136 1362 137 0 0 chr5 113454056 113454253 -89631279 + MER41C LTR ERV1 69 265 -289 682 222 7 0 chr5 113454334 113454469 -89631063 + L1PBb LINE L1 164 299 -5905 1936 161 18 9 chr5 113454488 113454818 -89630714 + MER41-int LTR ERV1 1 333 -5613 1065 189 64 4 chr5 113454923 113455204 -89630328 - L1M4c LINE L1 -3629 2753 2456 1562 199 44 95 chr5 113455210 113455641 -89629891 - MER47B DNA MER2_type -9 409 1 5008 164 54 17 chr5 113455641 113455854 -89629678 - L1M4 LINE L1 -3927 2457 2253 227 79 26 0 chr5 113455854 113455892 -89629640 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 5008 164 54 17 chr5 113455892 113456714 -89628818 - L1M4 LINE L1 -4131 2253 1384 * 7069 191 20 24 chr5 113456703 113458197 -89627335 - L1M4c LINE L1 -4768 1616 129 764 316 55 4 chr5 113458539 113458792 -89626740 + LTR16C LTR ERVL 212 477 -14 1279 295 60 56 chr5 113459065 113460015 -89625517 + L1MEd LINE L1 364 1317 -4888 340 253 10 10 chr5 113460223 113460322 -89625210 + L1MEd LINE L1 1576 1674 -4722 214 314 14 0 chr5 113460467 113460537 -89624995 + (TAG)n Simple_repeat Simple_repeat 2 72 0 300 53 0 0 chr5 113460742 113460780 -89624752 + (TA)n Simple_repeat Simple_repeat 1 38 0 212 77 26 0 chr5 113462188 113462227 -89623305 + (CA)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr5 113463623 113463649 -89621883 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 113463677 113463706 -89621826 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr5 113464463 113464501 -89621031 + AT_rich Low_complexity Low_complexity 1 38 0 1421 169 117 11 chr5 113464501 113464774 -89620758 - AluJb SINE Alu -10 302 1 1292 176 69 0 chr5 113464776 113465021 -89620511 - AluJo SINE Alu -16 296 35 579 304 50 45 chr5 113465747 113466187 -89619345 + L1ME2 LINE L1 1094 1535 -4888 * 763 305 66 46 chr5 113466171 113466758 -89618774 + L1ME2 LINE L1 1857 2455 -4667 391 307 69 27 chr5 113466854 113467259 -89618273 + L1ME2 LINE L1 3130 3555 -3386 1043 252 83 54 chr5 113467265 113467348 -89618184 + L1ME2 LINE L1 6411 6490 -469 1642 189 3 0 chr5 113467348 113467634 -89617898 + AluJo SINE Alu 1 287 -25 1043 252 83 54 chr5 113467634 113468046 -89617486 + L1ME2 LINE L1 6490 6920 -39 258 153 0 0 chr5 113468098 113468157 -89617375 + (TA)n Simple_repeat Simple_repeat 1 59 0 1233 172 0 10 chr5 113468164 113468367 -89617165 - AluJb SINE Alu -39 273 73 37 76 0 0 chr5 113468464 113468543 -89616989 + AT_rich Low_complexity Low_complexity 1 79 0 1337 25 0 0 chr5 113468655 113468812 -89616720 + L1PA4 LINE L1 5769 5925 -230 482 184 0 11 chr5 113468812 113468899 -89616633 - AluJb SINE Alu -226 86 1 796 252 92 28 chr5 113468910 113469235 -89616297 - L1ME3A LINE L1 -72 6098 5753 2020 142 3 0 chr5 113469235 113469544 -89615988 - AluSq SINE Alu -1 312 3 1636 265 107 11 chr5 113469547 113470568 -89614964 - L1ME3A LINE L1 -777 5387 4263 392 222 43 43 chr5 113470571 113470688 -89614844 + L1ME3A LINE L1 6046 6162 -8 836 238 0 30 chr5 113471082 113471284 -89614248 + MER3 DNA MER1_type 13 208 -1 5170 224 44 55 chr5 113471418 113474742 -89610790 - L1MA8 LINE L1 -7 7703 4474 2661 234 53 79 chr5 113474739 113475362 -89610170 - L1MA8 LINE L1 -3949 3616 2978 * 556 90 13 0 chr5 113475362 113475440 -89610092 - MER51B LTR ERV1 -83 294 216 2661 234 53 79 chr5 113475440 113476294 -89609238 - L1MA8 LINE L1 -4587 2978 2170 662 188 0 83 chr5 113476294 113476438 -89609094 - FLAM_A SINE Alu 0 133 2 2661 234 53 79 chr5 113476438 113476583 -89608949 - L1MA8 LINE L1 -5395 2170 2023 1953 266 113 51 chr5 113476588 113477605 -89607927 - L1MA8 LINE L1 -5950 1539 460 183 261 0 22 chr5 113477630 113477676 -89607856 - MER5A DNA MER1_type -107 82 38 254 412 0 0 chr5 113478249 113478368 -89607164 - MIR3 SINE MIR -5 203 85 220 211 268 0 chr5 113478441 113478512 -89607020 - L2 LINE L2 -2 3311 3222 884 194 72 0 chr5 113478803 113478983 -89606549 - AluJ SINE Alu 0 312 120 194 389 97 6 chr5 113480022 113480351 -89605181 + L2 LINE L2 2344 2702 -612 650 168 8 32 chr5 113480383 113480508 -89605024 - AluJ SINE Alu -180 122 1 605 203 0 8 chr5 113481857 113481975 -89603557 + LTR33 LTR ERVL 14 130 -391 305 299 37 15 chr5 113482140 113482274 -89603258 + LTR33 LTR ERVL 385 521 0 23 33 0 0 chr5 113482412 113482442 -89603090 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 113482742 113482768 -89602764 + AT_rich Low_complexity Low_complexity 1 26 0 4751 39 0 0 chr5 113483166 113484171 -89601361 - L1PA5 LINE L1 -329 5825 4821 321 356 43 12 chr5 113484261 113484424 -89601108 - L1M4 LINE L1 -1487 4659 4492 406 256 26 0 chr5 113484485 113484602 -89600930 - L1MD2 LINE L1 -17 6342 6223 701 230 149 28 chr5 113484605 113484853 -89600679 - MSTC LTR MaLR -130 298 21 219 359 62 20 chr5 113485781 113485976 -89599556 + L2 LINE L2 2312 2514 -800 2055 107 21 3 chr5 113485985 113486274 -89599258 - AluSx SINE Alu -18 294 1 21 0 0 0 chr5 113486901 113486922 -89598610 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr5 113487741 113487764 -89597768 + (TG)n Simple_repeat Simple_repeat 2 24 0 570 234 35 86 chr5 113487985 113488275 -89597257 - ORSL DNA AcHobo 0 275 1 21 36 0 0 chr5 113488593 113488621 -89596911 + AT_rich Low_complexity Low_complexity 1 28 0 1004 301 72 42 chr5 113488640 113489429 -89596103 - L2 LINE L2 0 3313 2497 696 322 129 12 chr5 113489468 113489723 -89595809 - LTR33 LTR ERVL -236 285 1 1247 304 76 16 chr5 113489760 113490273 -89595259 - L2 LINE L2 -2293 1021 478 1390 248 86 0 chr5 113490273 113490603 -89594929 - MSTD LTR MaLR 0 396 42 625 266 96 0 chr5 113490723 113490941 -89594591 + MER46C DNA MER2_type 2 240 -98 687 217 53 0 chr5 113491097 113491249 -89594283 + MER3 DNA MER1_type 1 160 -49 1476 204 6 35 chr5 113491566 113491880 -89593652 + AluJo SINE Alu 3 307 -5 486 0 0 0 chr5 113493336 113493390 -89592142 + (TA)n Simple_repeat Simple_repeat 2 55 0 737 327 114 25 chr5 113493640 113494270 -89591262 + L1M4 LINE L1 4379 5064 -1082 5360 152 35 34 chr5 113494299 113496039 -89589493 + L1PB1 LINE L1 4129 5863 -288 2402 82 3 0 chr5 113496039 113496345 -89589187 + AluSp SINE Alu 1 307 -6 5360 152 35 34 chr5 113496345 113496635 -89588897 + L1PB1 LINE L1 5863 6151 0 252 238 86 9 chr5 113496750 113496855 -89588677 + L1M4 LINE L1 5209 5321 -825 1078 324 51 22 chr5 113496939 113497387 -89588145 - LTR33 LTR ERVL -60 461 1 851 292 66 36 chr5 113497639 113497971 -89587561 + LTR16C LTR ERVL 123 464 -27 553 331 35 11 chr5 113498138 113498398 -89587134 - ERVL LTR ERVL -435 5329 5064 5992 107 16 2 chr5 113498453 113499627 -89585905 - L1PA12 LINE L1 -2 6166 4975 851 220 37 11 chr5 113499672 113499863 -89585669 + AluJo SINE Alu 105 300 -12 1063 191 39 5 chr5 113499864 113500068 -89585464 - THE1B LTR MaLR -153 211 1 5103 200 11 5 chr5 113500078 113501200 -89584332 - L1PBa LINE L1 -2805 4057 2929 * 14352 61 6 3 chr5 113501197 113503079 -89582453 - L1P LINE L1 -1097 5049 3162 2804 153 2 0 chr5 113503068 113503511 -89582021 - L1PBa LINE L1 -5258 1605 1162 * 493 314 47 6 chr5 113504169 113504338 -89581194 - LTR33 LTR ERVL -2 519 344 766 282 38 56 chr5 113504367 113504654 -89580878 - LTR33 LTR ERVL -239 282 1 8698 196 74 25 chr5 113505037 113507330 -89578202 + L1MB2 LINE L1 3118 5583 -600 242 28 0 28 chr5 113507330 113507366 -89578166 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8698 196 74 25 chr5 113507366 113507978 -89577554 + L1MB2 LINE L1 5583 6164 -19 1719 93 19 8 chr5 113508314 113508572 -89576960 + L1PB2 LINE L1 5891 6151 0 1693 197 25 29 chr5 113508612 113508971 -89576561 - MLT2C1 LTR ERVL -48 472 1 40 87 0 0 chr5 113509005 113509108 -89576424 + AT_rich Low_complexity Low_complexity 1 103 0 219 204 0 0 chr5 113509398 113509452 -89576080 + (TA)n Simple_repeat Simple_repeat 1 54 0 2039 131 17 7 chr5 113509483 113509780 -89575752 - AluSx SINE Alu -12 300 1 498 291 26 7 chr5 113510034 113510185 -89575347 + MIR SINE MIR 47 200 -62 420 290 61 29 chr5 113510223 113510468 -89575064 + Charlie2 DNA MER1_type 72 324 -2538 538 205 55 0 chr5 113510474 113510601 -89574931 + Charlie2 DNA MER1_type 1856 1989 -873 30 45 0 0 chr5 113510685 113510729 -89574803 + AT_rich Low_complexity Low_complexity 1 44 0 688 234 120 5 chr5 113510754 113510938 -89574594 - MLT1G1 LTR MaLR -390 205 1 409 275 18 9 chr5 113511563 113511672 -89573860 - MER81 DNA DNA 0 114 5 410 204 48 34 chr5 113511821 113511968 -89573564 + LTR37B LTR ERV1 1 149 -319 496 214 51 74 chr5 113512087 113512344 -89573188 + LTR37B LTR ERV1 205 455 -13 286 379 118 6 chr5 113513616 113513785 -89571747 + L2 LINE L2 2860 3047 -225 2107 102 18 0 chr5 113514111 113514394 -89571138 + AluSg SINE Alu 5 292 -18 2838 220 68 65 chr5 113514567 113515831 -89569701 + L1ME1 LINE L1 4755 6005 -161 1933 133 0 4 chr5 113515831 113516109 -89569423 + AluSq SINE Alu 1 277 -36 2838 220 68 65 chr5 113516109 113516267 -89569265 + L1ME1 LINE L1 6005 6161 -5 254 283 0 0 chr5 113516270 113516323 -89569209 + polypurine Low_complexity Low_complexity 3 55 0 1271 258 93 38 chr5 113516323 113516850 -89568682 + L1MC4 LINE L1 7482 8037 -5 259 130 22 0 chr5 113516895 113516941 -89568591 + L1M4 LINE L1 4501 4547 -1599 244 337 143 0 chr5 113517214 113517312 -89568220 - L2 LINE L2 0 3272 3161 192 291 51 74 chr5 113517657 113517832 -89567700 - L2 LINE L2 -1532 1782 1612 2908 163 22 81 chr5 113518107 113518839 -89566693 + LTR8 LTR ERV1 1 689 -2 246 32 0 0 chr5 113519806 113519837 -89565695 + (CAA)n Simple_repeat Simple_repeat 2 32 0 428 242 63 99 chr5 113520517 113520740 -89564792 + L1MCc LINE L1 17 231 -6192 366 202 0 32 chr5 113520840 113520934 -89564598 - MLT1A2 LTR MaLR -95 279 189 558 208 62 101 chr5 113521001 113521179 -89564353 - MLT1A2 LTR MaLR -217 173 3 183 156 0 0 chr5 113522137 113522169 -89563363 + GA-rich Low_complexity Low_complexity 3 34 0 344 122 0 0 chr5 113523488 113523537 -89561995 + LTR40a LTR ERVL 1 49 -470 21 36 0 0 chr5 113523655 113523683 -89561849 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 113524401 113524429 -89561103 + AT_rich Low_complexity Low_complexity 1 28 0 252 143 0 0 chr5 113524455 113524497 -89561035 + (TG)n Simple_repeat Simple_repeat 2 43 0 395 318 127 23 chr5 113524774 113524947 -89560585 + MIR SINE MIR 1 191 -71 1704 168 17 14 chr5 113525315 113525607 -89559925 - AluJo SINE Alu -19 293 1 403 315 101 60 chr5 113525962 113526359 -89559173 + MLT1K LTR MaLR 158 570 -18 956 301 0 0 chr5 113526644 113526880 -89558652 + MIR SINE MIR 18 253 -9 2328 80 13 3 chr5 113526903 113527205 -89558327 - AluY SINE Alu -6 305 1 24 32 0 0 chr5 113527247 113527278 -89558254 + AT_rich Low_complexity Low_complexity 1 31 0 230 274 72 139 chr5 113528005 113528213 -89557319 - MIR SINE MIR -25 237 44 393 293 58 32 chr5 113528567 113528755 -89556777 + LTR16C LTR ERVL 296 488 -3 302 337 101 0 chr5 113529425 113529594 -89555938 - MIR SINE MIR 0 262 77 962 208 0 6 chr5 113530119 113530297 -89555235 - MER5B DNA MER1_type -1 177 1 417 260 31 0 chr5 113531091 113531187 -89554345 - MER90 LTR ERV1 0 575 477 8374 154 4 39 chr5 113531860 113533467 -89552065 + L1P LINE L1 3316 4865 -1281 924 135 6 6 chr5 113533467 113533622 -89551910 + L1PA13 LINE L1 6008 6163 0 199 349 0 60 chr5 113533647 113533730 -89551802 + L2 LINE L2 3232 3309 -4 22 56 0 0 chr5 113534796 113534832 -89550700 + AT_rich Low_complexity Low_complexity 1 36 0 665 319 113 44 chr5 113535371 113535920 -89549612 + MLT1K LTR MaLR 2 588 0 219 146 0 0 chr5 113536101 113536142 -89549390 + (TATG)n Simple_repeat Simple_repeat 4 44 0 243 0 0 0 chr5 113537705 113537732 -89547800 + (GA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr5 113538100 113538123 -89547409 + AT_rich Low_complexity Low_complexity 1 23 0 783 222 6 19 chr5 113538798 113538960 -89546572 + FRAM SINE Alu 1 160 -6 344 45 0 0 chr5 113540855 113540899 -89544633 - L1PA5 LINE L1 -1523 4623 4580 * 7244 39 9 6 chr5 113540897 113542307 -89543225 + L1PA5 LINE L1 4619 6152 -2 774 144 102 24 chr5 113542320 113542501 -89543031 + L1MC1 LINE L1 5932 6130 -36 874 136 111 6 chr5 113542503 113542665 -89542867 + L1MB3 LINE L1 6005 6183 0 885 151 65 0 chr5 113542678 113542863 -89542669 + L1MC2 LINE L1 6136 6332 -12 1981 81 0 8 chr5 113542865 113543125 -89542407 - AluY SINE Alu -15 296 39 192 432 0 0 chr5 113543388 113543469 -89542063 + L2 LINE L2 3156 3236 -36 657 268 33 6 chr5 113543744 113543927 -89541605 + L1ME1 LINE L1 5952 6139 -27 1356 214 33 3 chr5 113544330 113544633 -89540899 - L1ME LINE L1 -558 5608 5297 * 2495 257 67 71 chr5 113544628 113545624 -89539908 - L1M4b LINE L1 -5455 1404 349 921 290 57 0 chr5 113545644 113545906 -89539626 - L1M4b LINE L1 -6563 296 20 2713 171 2 25 chr5 113547219 113547704 -89537828 + MLT2B2 LTR ERVL 2 475 -40 305 98 0 0 chr5 113547731 113547772 -89537760 - MLT2C2 LTR ERVL 0 464 424 1994 235 39 66 chr5 113548482 113549192 -89536340 - LTR8 LTR ERV1 0 691 1 255 283 117 50 chr5 113549261 113549381 -89536151 + MIR SINE MIR 3 130 -132 903 263 31 12 chr5 113549590 113549845 -89535687 + MIR SINE MIR 3 262 0 21 57 0 0 chr5 113550107 113550142 -89535390 + AT_rich Low_complexity Low_complexity 1 35 0 943 230 100 125 chr5 113550237 113550621 -89534911 + MER39 LTR ERV1 5 537 -170 2246 114 0 0 chr5 113550621 113550920 -89534612 + AluSx SINE Alu 1 299 -13 943 230 100 125 chr5 113550920 113551087 -89534445 + MER39 LTR ERV1 537 707 0 324 0 0 0 chr5 113552078 113552114 -89533418 + (TG)n Simple_repeat Simple_repeat 1 36 0 609 276 10 26 chr5 113552329 113552521 -89533011 + LTR41 LTR ERVL 2 190 -583 435 203 40 160 chr5 113552791 113553091 -89532441 + LTR41 LTR ERVL 503 766 -7 26 50 0 0 chr5 113553539 113553579 -89531953 + AT_rich Low_complexity Low_complexity 1 40 0 1775 182 27 32 chr5 113553599 113553972 -89531560 + MLT1A2 LTR MaLR 4 374 0 269 356 93 50 chr5 113554045 113554323 -89531209 + L2 LINE L2 2910 3199 -73 435 214 188 0 chr5 113556454 113556566 -89528966 + FLAM_A SINE Alu 1 133 0 206 284 0 30 chr5 113556599 113556690 -89528842 + (TATATG)n Simple_repeat Simple_repeat 1 88 0 1389 276 144 6 chr5 113557342 113557441 -89528091 + L2 LINE L2 682 766 -2548 1951 144 141 8 chr5 113557441 113557817 -89527715 + MSTA LTR MaLR 3 428 0 1389 276 144 6 chr5 113557817 113558265 -89527267 + L2 LINE L2 766 1305 -2009 256 270 14 0 chr5 113558282 113558356 -89527176 - L1MEc LINE L1 -6206 190 116 23 68 0 0 chr5 113559135 113559179 -89526353 + AT_rich Low_complexity Low_complexity 1 44 0 216 97 0 0 chr5 113559576 113559607 -89525925 + (CTG)n Simple_repeat Simple_repeat 1 31 0 239 184 0 20 chr5 113560662 113560711 -89524821 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 275 330 21 0 chr5 113560740 113560834 -89524698 - HERVL LTR ERVL -362 5402 5307 1452 318 39 15 chr5 113560972 113561585 -89523947 - HERVL LTR ERVL -1109 4655 4028 350 280 40 0 chr5 113561676 113561776 -89523756 - HERVL LTR ERVL -1925 3839 3736 377 336 39 19 chr5 113562136 113562344 -89523188 - HERVL LTR ERVL -4978 676 465 2134 96 10 7 chr5 113562763 113563054 -89522478 + AluSx SINE Alu 1 292 -20 24 32 0 0 chr5 113563158 113563189 -89522343 + AT_rich Low_complexity Low_complexity 1 31 0 2082 226 59 49 chr5 113563318 113563366 -89522166 + MER77 LTR ERV1 3 49 -556 2160 106 7 0 chr5 113563366 113563692 -89521840 + AluSp SINE Alu 1 328 0 2082 226 59 49 chr5 113563692 113564239 -89521293 + MER77 LTR ERV1 49 605 0 1436 233 114 12 chr5 113564252 113564840 -89520692 + MER114 LTR ERV 1 648 0 243 288 0 25 chr5 113567660 113567740 -89517792 - MLT2E LTR ERVL -493 135 58 5864 138 29 19 chr5 113567758 113568795 -89516737 + L1MA6 LINE L1 5254 6300 0 595 129 0 0 chr5 113568821 113568906 -89516626 - MSTA LTR MaLR 0 428 344 4199 125 103 65 chr5 113568906 113570306 -89515226 - pTR5 LTR ERV1 0 2438 66 1599 139 133 7 chr5 113570306 113570615 -89514917 - MSTA LTR MaLR -80 348 1 824 207 0 17 chr5 113570615 113570789 -89514743 + L1MCa LINE L1 952 1122 -5304 4283 110 3 0 chr5 113570807 113571407 -89514125 + L1P LINE L1 11 612 -5534 344 194 0 0 chr5 113571408 113571470 -89514062 + L1PA6 LINE L1 6088 6149 -5 1694 234 62 49 chr5 113571496 113572209 -89513323 + L1M4 LINE L1 3586 4307 -1839 649 172 103 29 chr5 113572210 113572384 -89513148 + L1M4 LINE L1 4500 4686 -1460 645 280 50 5 chr5 113572487 113572687 -89512845 + L1MCc LINE L1 177 385 -6038 579 332 57 9 chr5 113573018 113573247 -89512285 + L1MCc LINE L1 839 1078 -5345 314 236 39 55 chr5 113573415 113573542 -89511990 - L1ME LINE L1 -313 5808 5684 404 321 63 0 chr5 113574462 113574621 -89510911 + MIR SINE MIR 63 231 -31 1860 137 0 76 chr5 113574907 113575236 -89510296 - AluSc SINE Alu -5 304 1 1718 122 131 25 chr5 113575488 113575809 -89509723 + THE1A LTR MaLR 1 355 0 11803 97 1 1 chr5 113575809 113577388 -89508144 + THE1A-int LTR MaLR 1 1580 0 2118 131 53 0 chr5 113577388 113577725 -89507807 + THE1A LTR MaLR 1 355 0 1938 183 83 21 chr5 113577997 113578429 -89507103 - MER31B LTR ERV1 -6 460 2 23 0 0 0 chr5 113578586 113578609 -89506923 + AT_rich Low_complexity Low_complexity 1 23 0 2447 69 0 7 chr5 113579089 113579394 -89506138 + AluY SINE Alu 1 303 -8 545 317 15 10 chr5 113579840 113580045 -89505487 + L2 LINE L2 3106 3311 -2 1110 114 20 60 chr5 113580286 113580487 -89505045 + L1PA16 LINE L1 5734 5926 -240 1831 136 49 0 chr5 113580530 113580816 -89504716 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 113580817 113580839 -89504693 + (GA)n Simple_repeat Simple_repeat 1 22 0 488 280 151 31 chr5 113580944 113581196 -89504336 + MLT1J2 LTR MaLR 37 344 -65 2175 151 27 14 chr5 113581196 113581566 -89503966 - THE1C LTR MaLR 0 375 1 488 280 151 31 chr5 113581566 113581642 -89503890 + MLT1J2 LTR MaLR 344 409 0 6731 73 8 0 chr5 113582466 113583690 -89501842 - L1PA7 LINE L1 -4 6150 4921 223 95 16 79 chr5 113584803 113584866 -89500666 + (TTA)n Simple_repeat Simple_repeat 1 59 0 26 0 0 0 chr5 113584899 113584925 -89500607 + AT_rich Low_complexity Low_complexity 1 26 0 2195 138 97 5 chr5 113586571 113586963 -89498569 - MSTA LTR MaLR 0 428 1 2985 156 76 0 chr5 113587190 113587741 -89497791 + L1PA16 LINE L1 5564 6156 -10 1891 142 3 17 chr5 113588345 113588640 -89496892 + AluJo SINE Alu 1 291 -21 6799 152 31 3 chr5 113589875 113591834 -89493698 + L1PA11 LINE L1 4190 6174 0 303 204 34 27 chr5 113591910 113592057 -89493475 + (TA)n Simple_repeat Simple_repeat 1 148 0 1103 198 68 0 chr5 113592390 113592627 -89492905 - L1MB7 LINE L1 -22 6162 5910 5595 208 26 14 chr5 113592630 113594728 -89490804 + L1MA4 LINE L1 1 2171 -4157 2586 100 14 3 chr5 113594728 113595088 -89490444 + THE1B LTR MaLR 1 364 0 5595 208 26 14 chr5 113595088 113595901 -89489631 + L1MA4 LINE L1 2171 2973 -3355 13284 171 57 21 chr5 113595906 113597709 -89487823 - L1MA2 LINE L1 0 7723 5987 180 0 0 0 chr5 113597709 113597729 -89487803 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 13284 171 57 21 chr5 113597729 113598999 -89486533 - L1MA2 LINE L1 -1736 5987 4765 307 23 68 0 chr5 113598999 113599043 -89486489 + MADE1 DNA Mariner 34 80 0 13284 171 57 21 chr5 113599043 113599889 -89485643 - L1MA2 LINE L1 -2958 4765 3606 200 57 0 29 chr5 113599889 113599924 -89485608 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 13284 171 57 21 chr5 113599924 113600140 -89485392 - L1MA2 LINE L1 -4117 3606 3399 334 60 80 0 chr5 113600140 113600190 -89485342 - MLT2A2 LTR ERVL 0 453 400 180 152 0 0 chr5 113600191 113600224 -89485308 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 273 70 18 18 chr5 113600227 113600284 -89485248 + LTR66 LTR ERVL 383 439 -171 * 2066 167 70 19 chr5 113600274 113600735 -89484797 - MLT2A2 LTR ERVL -40 514 6 1894 75 0 19 chr5 113600740 113601008 -89484524 - HERVL-A2 LTR ERVL 0 5654 5392 1246 196 28 12 chr5 113601048 113601303 -89484229 - L1MA2 LINE L1 -7294 271 13 * 11361 182 26 30 chr5 113601301 113601839 -89483693 + L1MA4 LINE L1 2961 3500 -2982 277 127 0 55 chr5 113601839 113601894 -89483638 + MADE1 DNA Mariner 3 54 -26 11361 182 26 30 chr5 113601894 113604838 -89480694 + L1MA4 LINE L1 3500 6476 -6 3014 186 22 49 chr5 113604848 113605489 -89480043 - L1MB7 LINE L1 -262 5922 5330 3350 155 70 5 chr5 113605489 113605961 -89479571 - L1MA7 LINE L1 -2 6289 5764 270 0 0 0 chr5 113605961 113605991 -89479541 + (TG)n Simple_repeat Simple_repeat 2 31 0 3350 155 70 5 chr5 113605991 113606151 -89479381 - L1MA7 LINE L1 -527 5764 5616 3014 186 22 49 chr5 113606151 113606740 -89478792 - L1MB7 LINE L1 -854 5330 4727 23 33 0 0 chr5 113606753 113606783 -89478749 + AT_rich Low_complexity Low_complexity 1 30 0 550 314 38 17 chr5 113606783 113607098 -89478434 - L1MC5 LINE L1 -885 6978 6614 22 70 0 0 chr5 113607398 113607441 -89478091 + AT_rich Low_complexity Low_complexity 1 43 0 1410 206 35 0 chr5 113607739 113608026 -89477506 - AluJo SINE Alu -15 297 1 275 279 22 84 chr5 113608110 113608468 -89477064 - L1MB7 LINE L1 -1469 4677 4342 1996 124 0 0 chr5 113608546 113608845 -89476687 - AluSx SINE Alu 0 307 9 504 125 23 0 chr5 113608857 113608945 -89476587 - L1MD1 LINE L1 -6 6236 6147 931 204 41 56 chr5 113610339 113610658 -89474874 - MER33 DNA MER1_type -6 318 5 21 36 0 0 chr5 113610982 113611010 -89474522 + AT_rich Low_complexity Low_complexity 1 28 0 800 235 66 14 chr5 113611028 113611241 -89474291 - MER58A DNA MER1_type 0 224 1 28 29 0 0 chr5 113611791 113611826 -89473706 + AT_rich Low_complexity Low_complexity 1 35 0 362 274 133 34 chr5 113612741 113613098 -89472434 - MLT1J LTR MaLR 0 488 127 255 326 75 101 chr5 113613192 113613799 -89471733 - L2 LINE L2 0 3272 2683 227 158 0 0 chr5 113613852 113613890 -89471642 - L2 LINE L2 -8 3305 3268 185 250 19 0 chr5 113616587 113616639 -89468893 - L2 LINE L2 0 3272 3220 401 314 72 24 chr5 113616841 113617048 -89468484 + MIR SINE MIR 11 227 -35 341 316 158 5 chr5 113617090 113617299 -89468233 - MIR SINE MIR -2 260 20 30 0 0 0 chr5 113618258 113618288 -89467244 + AT_rich Low_complexity Low_complexity 1 30 0 1959 211 9 3 chr5 113619666 113620047 -89465485 + MLT2D LTR ERVL 1 481 -39 283 200 36 9 chr5 113620052 113620162 -89465370 + (TA)n Simple_repeat Simple_repeat 2 114 0 310 371 75 29 chr5 113620937 113621217 -89464315 + L3 LINE CR1 3 295 -1282 26 50 0 0 chr5 113621248 113621288 -89464244 + AT_rich Low_complexity Low_complexity 1 40 0 580 330 72 0 chr5 113621533 113621742 -89463790 + MIR SINE MIR 2 225 -37 191 269 28 120 chr5 113621782 113621890 -89463642 + L2 LINE L2 3137 3234 -38 2251 114 5 62 chr5 113622927 113623124 -89462408 - THE1B LTR MaLR 0 364 197 1630 140 0 0 chr5 113623124 113623381 -89462151 - AluSg SINE Alu 0 302 46 2251 114 5 62 chr5 113623381 113623568 -89461964 - THE1B LTR MaLR -167 197 1 11156 105 9 1 chr5 113623568 113625135 -89460397 - THE1B-int LTR MaLR 0 1580 1 2087 142 8 32 chr5 113625135 113625508 -89460024 - THE1B LTR MaLR 0 364 1 920 203 106 36 chr5 113626140 113626441 -89459091 - MER5C DNA MER1_type -1 323 2 284 311 168 31 chr5 113626525 113626686 -89458846 + MIR3 SINE MIR 23 205 -3 360 374 52 12 chr5 113626968 113627217 -89458315 + L3b LINE CR1 1246 1504 -79 297 270 84 47 chr5 113628336 113628551 -89456981 - L1ME4a LINE L1 -68 6036 5814 412 345 28 33 chr5 113628755 113629114 -89456418 - L1ME4a LINE L1 -305 5799 5443 415 291 58 0 chr5 113629343 113629532 -89456000 - L1ME4a LINE L1 -3597 2532 2333 380 288 55 12 chr5 113629585 113629748 -89455784 - L1ME4a LINE L1 -3942 2187 2018 21 71 0 0 chr5 113629911 113629953 -89455579 + AT_rich Low_complexity Low_complexity 1 42 0 327 206 41 41 chr5 113630085 113630182 -89455350 - HAL1 LINE L1 -840 1667 1571 370 280 159 18 chr5 113630279 113630557 -89454975 - L1MEd LINE L1 -4893 1226 1014 768 273 114 51 chr5 113630594 113631103 -89454429 + MLT1H LTR MaLR 5 545 -4 773 247 0 28 chr5 113632044 113632222 -89453310 + MER5B DNA MER1_type 6 178 0 24 0 0 29 chr5 113633354 113633376 -89452156 + AT_rich Low_complexity Low_complexity 1 23 -11 7289 175 2 7 chr5 113633376 113635485 -89450047 - L1PA14 LINE L1 -3 6158 4041 24 0 0 29 chr5 113635485 113635497 -89450035 + AT_rich Low_complexity Low_complexity 23 34 0 423 324 113 14 chr5 113636147 113636360 -89449172 - MIR SINE MIR -1 261 28 2201 112 3 0 chr5 113636633 113636938 -89448594 + AluSp SINE Alu 1 306 -7 1246 109 11 0 chr5 113636938 113637112 -89448420 + AluSq SINE Alu 134 309 -4 204 355 77 41 chr5 113637448 113637617 -89447915 - L2 LINE L2 -2 3270 3096 207 204 0 41 chr5 113637677 113637726 -89447806 - L2 LINE L2 -2 3311 3265 2550 57 0 0 chr5 113637843 113638140 -89447392 + AluY SINE Alu 4 300 -11 761 237 6 12 chr5 113638206 113638379 -89447153 - MIR SINE MIR -42 220 49 848 219 22 0 chr5 113638546 113638729 -89446803 - MER5A DNA MER1_type -1 188 2 190 286 170 35 chr5 113638812 113638983 -89446549 + L2 LINE L2 2301 2494 -820 184 189 27 0 chr5 113639002 113639039 -89446493 - L2 LINE L2 -5 3267 3230 608 294 69 29 chr5 113639113 113639358 -89446174 - MER110 LTR ERV1 -70 421 167 464 229 111 7 chr5 113641093 113641237 -89444295 - Charlie8 DNA MER1_type -2162 255 97 205 222 0 19 chr5 113641237 113641291 -89444241 + A-rich Low_complexity Low_complexity 5 57 0 183 409 66 21 chr5 113641352 113641594 -89443938 + L2 LINE L2 2808 3060 -212 202 225 0 0 chr5 113641930 113641970 -89443562 + L2 LINE L2 3263 3302 -11 8082 165 30 7 chr5 113642073 113643633 -89441899 + L1 LINE L1 3151 4746 -1400 21 0 0 0 chr5 113643863 113643884 -89441648 + AT_rich Low_complexity Low_complexity 1 21 0 12157 174 10 8 chr5 113644801 113645530 -89440002 - L1P LINE L1 -1973 4173 3447 683 83 0 0 chr5 113645530 113645626 -89439906 - L1PA7 LINE L1 0 6154 6059 12157 174 10 8 chr5 113645626 113646387 -89439145 - L1P LINE L1 -2699 3447 2689 2166 148 19 8 chr5 113646387 113646758 -89438774 + THE1C LTR MaLR 1 375 0 12157 174 10 8 chr5 113646758 113647522 -89438010 - L1P LINE L1 -3457 2689 1914 22 88 0 0 chr5 113648984 113649041 -89436491 + AT_rich Low_complexity Low_complexity 1 57 0 267 79 0 0 chr5 113650790 113650828 -89434704 + (CA)n Simple_repeat Simple_repeat 1 38 0 228 246 203 0 chr5 113651296 113651365 -89434167 + L2 LINE L2 3230 3312 -1 209 370 19 19 chr5 113651635 113651743 -89433789 + L2 LINE L2 2706 2813 -501 341 26 0 0 chr5 113651750 113651789 -89433743 + (T)n Simple_repeat Simple_repeat 1 39 0 6730 117 27 25 chr5 113651924 113652241 -89433291 + L1MA2 LINE L1 5019 5334 -970 2274 109 6 6 chr5 113652241 113652553 -89432979 + AluSx SINE Alu 1 312 0 6730 117 27 25 chr5 113652553 113653507 -89432025 + L1MA2 LINE L1 5334 6298 -6 390 307 36 64 chr5 113653625 113653905 -89431627 - MLT1L LTR MaLR -2 613 238 312 70 0 0 chr5 113654427 113654470 -89431062 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 364 305 71 14 chr5 113654616 113654757 -89430775 - L3b LINE CR1 -332 1251 1103 1593 172 24 10 chr5 113655708 113656025 -89429507 + AluJo SINE Alu 1 312 0 375 304 95 30 chr5 113656237 113656405 -89429127 - MIR SINE MIR -30 232 54 572 324 27 58 chr5 113656455 113656785 -89428747 + L2 LINE L2 2124 2443 -871 321 291 25 76 chr5 113657074 113657232 -89428300 + L2 LINE L2 2653 2802 -512 734 238 91 12 chr5 113657825 113658077 -89427455 + MER5C DNA MER1_type 53 324 0 281 254 0 32 chr5 113659732 113659795 -89425737 - 7SK RNA RNA -128 65 5 2923 121 5 2 chr5 113660150 113660579 -89424953 - MER57B LTR ERV1 -4 430 1 196 228 127 38 chr5 113661951 113662030 -89423502 + MIR3 SINE MIR 123 208 0 32 67 0 0 chr5 113662032 113662092 -89423440 + AT_rich Low_complexity Low_complexity 1 60 0 1054 171 0 11 chr5 113662098 113662273 -89423259 - AluJb SINE Alu -17 295 123 319 273 31 31 chr5 113662724 113662852 -89422680 + L1ME LINE L1 272 399 -5671 2135 110 0 13 chr5 113663022 113663322 -89422210 + AluY SINE Alu 1 296 -15 419 279 55 40 chr5 113663395 113663883 -89421649 + L1ME LINE L1 565 960 -5018 2455 119 3 31 chr5 113664662 113665048 -89420484 - THE1C LTR MaLR 0 375 1 28 61 0 0 chr5 113665154 113665203 -89420329 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr5 113666453 113666483 -89419049 + AT_rich Low_complexity Low_complexity 1 30 0 189 411 36 27 chr5 113669436 113669660 -89415872 - L2 LINE L2 -221 3092 2867 694 196 12 52 chr5 113669925 113670098 -89415434 + FRAM SINE Alu 1 166 0 753 303 76 10 chr5 113671923 113672213 -89413319 + LTR16C LTR ERVL 182 490 -1 372 360 100 5 chr5 113672747 113672947 -89412585 + MIR SINE MIR 23 241 -21 290 291 197 8 chr5 113672980 113673097 -89412435 - L2 LINE L2 -1 3271 3133 31 26 0 0 chr5 113673099 113673137 -89412395 + AT_rich Low_complexity Low_complexity 1 38 0 27 0 0 0 chr5 113673178 113673205 -89412327 + AT_rich Low_complexity Low_complexity 1 27 0 5496 108 11 37 chr5 113674371 113675258 -89410274 - L1PB1 LINE L1 -2 6149 5286 2461 216 35 5 chr5 113675255 113675874 -89409658 + L1 LINE L1 2862 3499 -2647 * 2028 61 0 4 chr5 113675886 113676163 -89409369 - L1PA5 LINE L1 -814 5332 5057 6806 38 0 0 chr5 113676163 113676968 -89408564 + L1PA5 LINE L1 5333 6139 -15 7711 210 25 15 chr5 113677128 113678028 -89407504 + L1 LINE L1 3485 4375 -1771 279 0 0 0 chr5 113678028 113678059 -89407473 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7711 210 25 15 chr5 113678059 113678539 -89406993 + L1 LINE L1 4375 4888 -1258 1896 150 0 32 chr5 113678539 113678853 -89406679 + AluSx SINE Alu 1 304 -8 7711 210 25 15 chr5 113678853 113679269 -89406263 + L1 LINE L1 4888 5299 -847 200 33 0 33 chr5 113679455 113679485 -89406047 + (TTG)n Simple_repeat Simple_repeat 3 31 0 384 296 99 33 chr5 113679920 113680072 -89405460 - MIR3 SINE MIR -36 172 11 328 371 48 22 chr5 113680118 113680347 -89405185 - MIR SINE MIR 0 262 28 355 333 107 49 chr5 113680404 113680629 -89404903 + L2 LINE L2 2549 2786 -528 23 0 0 0 chr5 113680680 113680703 -89404829 + AT_rich Low_complexity Low_complexity 1 23 0 2558 58 0 0 chr5 113680809 113681120 -89404412 - AluY SINE Alu 0 311 1 547 262 6 0 chr5 113681313 113681485 -89404047 + L1M4 LINE L1 3806 3978 -2168 318 50 0 0 chr5 113681874 113681914 -89403618 + (CA)n Simple_repeat Simple_repeat 2 41 0 2414 175 13 15 chr5 113682629 113683091 -89402441 - MER65C LTR ERV1 0 461 1 186 302 19 0 chr5 113683357 113683410 -89402122 - MIR SINE MIR 0 262 209 635 262 58 0 chr5 113683448 113683620 -89401912 - MIR SINE MIR -35 227 46 1168 42 0 0 chr5 113683655 113683799 -89401733 - L1PA4 LINE L1 0 6155 6012 1871 22 4 4 chr5 113684076 113684301 -89401231 - L1PA4 LINE L1 -247 5908 5684 305 24 0 0 chr5 113684301 113684339 -89401193 + L1PA2 LINE L1 6111 6151 -4 240 100 0 0 chr5 113684348 113684388 -89401144 + (A)n Simple_repeat Simple_repeat 1 40 0 8883 159 53 6 chr5 113684487 113687217 -89398315 + L1M1 LINE L1 6 2981 -4584 2880 175 20 77 chr5 113687243 113687825 -89397707 + L1M1 LINE L1 3264 3715 -3850 222 91 0 0 chr5 113687825 113687858 -89397674 + (TA)n Simple_repeat Simple_repeat 1 33 0 2880 175 20 77 chr5 113687858 113688551 -89396981 + L1M1 LINE L1 3715 4446 -3119 270 0 0 0 chr5 113688685 113688715 -89396817 + (A)n Simple_repeat Simple_repeat 1 30 0 585 263 140 11 chr5 113689991 113690170 -89395362 - MIR SINE MIR -5 257 56 988 251 115 21 chr5 113690452 113690782 -89394750 + MER69 DNA AcHobo 27 387 -839 1437 261 86 47 chr5 113690839 113691311 -89394221 + MER69 DNA AcHobo 492 999 -1527 4505 139 23 30 chr5 113691311 113692102 -89393430 + LTR1 LTR ERV1 1 785 0 1437 261 86 47 chr5 113692102 113692292 -89393240 + MER69 DNA AcHobo 999 1180 -1346 736 164 47 18 chr5 113692292 113692463 -89393069 + MER69 DNA AcHobo 2347 2522 -4 659 277 96 60 chr5 113693419 113693784 -89391748 + MLT1J2 LTR MaLR 61 438 -12 209 269 0 19 chr5 113697783 113697835 -89387697 - L2 LINE L2 -14 3299 3249 465 278 107 11 chr5 113697931 113698118 -89387414 - MIR SINE MIR -26 236 32 239 259 48 96 chr5 113698697 113698863 -89386669 - MIR SINE MIR -46 216 59 2277 106 0 3 chr5 113699903 113700205 -89385327 - AluSg SINE Alu -9 301 1 22 56 0 0 chr5 113700267 113700303 -89385229 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 113700496 113700519 -89385013 + AT_rich Low_complexity Low_complexity 1 23 0 211 26 0 53 chr5 113700961 113700999 -89384533 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 287 172 0 17 chr5 113701616 113701674 -89383858 + MLT1A1 LTR MaLR 3 59 -306 40520 35 22 2 chr5 113701687 113707715 -89377817 + L1PA2 LINE L1 3 6155 0 1253 168 4 12 chr5 113707715 113708002 -89377530 + MLT1A1 LTR MaLR 44 365 0 25 31 0 0 chr5 113708407 113708439 -89377093 + AT_rich Low_complexity Low_complexity 1 32 0 377 311 137 19 chr5 113709299 113709511 -89376021 + MIR SINE MIR 20 256 -6 1173 226 81 31 chr5 113711225 113711584 -89373948 + MLT1B LTR MaLR 14 390 0 1631 189 32 53 chr5 113712997 113713377 -89372155 + MLT2B1 LTR ERVL 149 520 0 219 69 0 0 chr5 113713396 113713425 -89372107 + (T)n Simple_repeat Simple_repeat 1 29 0 1205 14 0 0 chr5 113713426 113713565 -89371967 - LTR2B LTR ERV1 -44 446 308 41764 40 2 2 chr5 113713572 113717876 -89367656 - L1PA4 LINE L1 -8 6147 1840 2768 16 0 3 chr5 113717876 113718187 -89367345 + AluYa5 SINE Alu 1 310 -1 41764 40 2 2 chr5 113718187 113720025 -89365507 - L1PA4 LINE L1 -4315 1840 4 386 297 78 8 chr5 113722013 113722141 -89363391 - L2 LINE L2 -2 3270 3134 993 150 18 0 chr5 113723128 113723295 -89362237 + MER84 LTR ERVI 338 507 0 5057 110 13 4 chr5 113723295 113723351 -89362181 + MER84-int LTR ERV1 1 55 -4899 1955 74 0 30 chr5 113723351 113723656 -89361876 - AluY SINE Alu 0 314 18 5057 110 13 4 chr5 113723656 113724370 -89361162 + MER84-int LTR ERV1 55 779 -4175 * 12147 94 9 14 chr5 113724369 113726158 -89359374 + MER84-int LTR ERV1 894 2672 -2282 981 90 0 2 chr5 113726161 113726415 -89359117 - AluY SINE Alu -8 303 1 3517 110 6 4 chr5 113726422 113726949 -89358583 + MER84-int LTR ERV1 4427 4954 0 815 165 66 11 chr5 113726949 113727276 -89358256 + MER84 LTR ERVI 1 427 -80 386 307 37 103 chr5 113727469 113727847 -89357685 + L2 LINE L2 2819 3171 -101 395 247 117 19 chr5 113728098 113728241 -89357291 + MIR SINE MIR 3 154 -68 2242 121 0 0 chr5 113728241 113728548 -89356984 + AluSx SINE Alu 1 307 -5 449 317 50 12 chr5 113728757 113728918 -89356614 - MIR SINE MIR -76 186 20 2078 134 10 0 chr5 113730110 113730447 -89355085 + AluSx SINE Alu 1 312 0 198 171 0 0 chr5 113731184 113731225 -89354307 + T-rich Low_complexity Low_complexity 1 41 0 741 226 198 28 chr5 113734002 113734241 -89351291 - L2 LINE L2 -252 3061 2864 436 275 8 0 chr5 113734241 113734372 -89351160 + MER94 DNA DNA 3 134 0 741 226 198 28 chr5 113734372 113734485 -89351047 - L2 LINE L2 -449 2864 2655 254 312 37 37 chr5 113734909 113735018 -89350514 - MER5B DNA MER1_type -68 110 2 628 200 7 12 chr5 113735232 113735380 -89350152 + MSTD LTR MaLR 1 134 -265 930 194 29 11 chr5 113735647 113735851 -89349681 + MSTD LTR MaLR 218 396 0 258 258 11 0 chr5 113735871 113735880 -89349652 + (TA)n Simple_repeat Simple_repeat 2 9 -82 1495 186 51 61 chr5 113735880 113736272 -89349260 - MLT1B LTR MaLR 0 390 3 258 258 11 0 chr5 113736272 113736351 -89349181 + (TA)n Simple_repeat Simple_repeat 9 91 0 435 355 42 0 chr5 113737106 113737272 -89348260 - MIR3 SINE MIR -5 203 31 221 305 137 11 chr5 113737793 113737888 -89347644 - MIR SINE MIR -3 259 153 648 291 154 22 chr5 113738032 113738434 -89347098 - MLT1K LTR MaLR 0 588 134 1657 205 0 0 chr5 113738939 113739237 -89346295 + AluJo SINE Alu 1 298 -14 186 323 67 61 chr5 113739272 113739436 -89346096 - L2 LINE L2 -162 3110 2946 227 390 136 6 chr5 113739604 113739927 -89345605 - L2 LINE L2 -581 2733 2369 2431 123 28 14 chr5 113740137 113740496 -89345036 + THE1B LTR MaLR 1 364 0 829 70 0 129 chr5 113740579 113740750 -89344782 - L1PA13 LINE L1 0 6163 6015 404 296 117 38 chr5 113741685 113742002 -89343530 + MLT1L LTR MaLR 166 507 -108 2438 48 0 0 chr5 113742797 113743089 -89342443 + AluY SINE Alu 1 292 -19 742 245 154 0 chr5 113743089 113743297 -89342235 + MIR SINE MIR 22 261 -1 204 303 141 20 chr5 113743494 113743593 -89341939 - L2 LINE L2 -1 3312 3202 1039 100 35 12 chr5 113746156 113746326 -89339206 - MER30 DNA MER1_type -56 174 1 2252 244 37 11 chr5 113747083 113747629 -89337903 + REP3 LTR ERV 3 562 0 22 0 0 0 chr5 113747935 113747957 -89337575 + AT_rich Low_complexity Low_complexity 1 22 0 665 264 31 0 chr5 113749798 113749961 -89335571 + MER20 DNA MER1_type 1 168 -51 1501 195 5 100 chr5 113750219 113750619 -89334913 - MLT1A1 LTR MaLR -2 363 2 297 200 0 0 chr5 113752369 113752424 -89333108 - L2 LINE L2 -3 3269 3215 388 357 0 0 chr5 113752706 113752832 -89332700 - MIR SINE MIR -52 210 85 527 277 100 45 chr5 113753023 113753243 -89332289 - MIR SINE MIR -15 247 16 248 395 151 14 chr5 113753269 113753824 -89331708 - L2 LINE L2 -472 2842 2212 194 304 218 30 chr5 113753850 113754317 -89331215 - L2 LINE L2 -1220 2094 1540 649 206 14 36 chr5 113754467 113754693 -89330839 + L1MC4a LINE L1 5265 5487 -688 318 250 23 11 chr5 113754720 113754808 -89330724 + L1MC4a LINE L1 5562 5650 -2158 22 0 0 0 chr5 113754839 113754861 -89330671 + AT_rich Low_complexity Low_complexity 1 22 0 453 254 184 18 chr5 113754943 113755344 -89330188 + L1MC4a LINE L1 5666 6133 -1675 268 282 0 14 chr5 113756312 113756383 -89329149 + MIR3 SINE MIR 132 201 -7 1260 210 78 52 chr5 113757356 113757742 -89327790 - MSTD LTR MaLR 0 396 1 1424 184 11 21 chr5 113757880 113758162 -89327370 + AluJo SINE Alu 12 290 -22 309 209 22 55 chr5 113758173 113758264 -89327268 + MER104 DNA Tc2 58 145 -35 2698 173 18 8 chr5 113758453 113758951 -89326581 + MLT1D LTR MaLR 3 505 0 228 241 35 26 chr5 113759161 113759277 -89326255 + L1MC4 LINE L1 7923 8039 -3 871 188 0 5 chr5 113759533 113759730 -89325802 + L1MA4 LINE L1 6101 6296 -4 248 350 44 35 chr5 113760869 113761095 -89324437 + L2 LINE L2 1209 1436 -1878 2682 94 3 21 chr5 113761529 113761911 -89323621 - THE1C LTR MaLR 0 375 1 827 299 21 0 chr5 113762388 113762622 -89322910 - MIR SINE MIR -11 251 13 21 57 0 0 chr5 113762889 113762924 -89322608 + AT_rich Low_complexity Low_complexity 1 35 0 2048 133 3 0 chr5 113764597 113764882 -89320650 + AluSx SINE Alu 1 286 -26 207 146 0 0 chr5 113765225 113765266 -89320266 + (TG)n Simple_repeat Simple_repeat 2 42 0 793 203 24 56 chr5 113765466 113765717 -89319815 - Charlie1b DNA MER1_type -191 332 90 241 200 17 0 chr5 113766657 113766717 -89318815 + (TA)n Simple_repeat Simple_repeat 1 61 0 496 310 12 33 chr5 113766722 113766964 -89318568 - L1ME3A LINE L1 -270 5900 5664 579 258 58 81 chr5 113767074 113767334 -89318198 - MIR SINE MIR -3 259 6 248 224 40 13 chr5 113767620 113767696 -89317836 - MLT1K LTR MaLR -7 581 504 513 84 0 0 chr5 113767716 113767787 -89317745 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 1165 224 7 7 chr5 113767787 113768081 -89317451 + L1MD1 LINE L1 2505 2798 -3348 319 198 59 30 chr5 113768077 113768178 -89317354 + L1MD1 LINE L1 4515 4618 -1528 * 4149 180 70 4 chr5 113768238 113769142 -89316390 + L1MD1 LINE L1 5279 6241 -1 2351 78 0 0 chr5 113769151 113769444 -89316088 + AluSg SINE Alu 1 293 -17 266 247 0 0 chr5 113769451 113769524 -89316008 - Charlie1 DNA MER1_type -58 2703 2631 24 0 0 0 chr5 113769573 113769597 -89315935 + AT_rich Low_complexity Low_complexity 1 24 0 4717 214 53 18 chr5 113769604 113770965 -89314567 - Charlie1a DNA MER1_type -43 1412 5 362 278 9 35 chr5 113770969 113771084 -89314448 + L2 LINE L2 3202 3313 0 893 199 0 47 chr5 113771090 113771261 -89314271 + FRAM SINE Alu 1 163 -3 334 288 43 43 chr5 113771918 113772081 -89313451 + MIR SINE MIR 50 212 -50 24 0 0 0 chr5 113772197 113772221 -89313311 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr5 113773276 113773306 -89312226 + AT_rich Low_complexity Low_complexity 1 30 0 222 293 60 35 chr5 113773889 113774005 -89311527 - L3 LINE CR1 -4 1573 1455 3355 139 9 19 chr5 113774441 113774972 -89310560 + MER1A DNA MER1_type 2 527 0 712 239 146 10 chr5 113775164 113775473 -89310059 + L1ME3A LINE L1 5551 5901 -269 247 282 55 55 chr5 113775634 113775744 -89309788 + L1ME3A LINE L1 5955 6064 -106 200 99 69 30 chr5 113775811 113775912 -89309620 + (TA)n Simple_repeat Simple_repeat 2 106 0 1838 256 61 20 chr5 113776588 113777178 -89308354 - MLT1E2 LTR MaLR 0 626 13 341 297 115 18 chr5 113778237 113778402 -89307130 - MIR3 SINE MIR -3 205 25 654 220 17 69 chr5 113780001 113780174 -89305358 - MER5B DNA MER1_type -13 165 2 22 0 0 0 chr5 113781870 113781892 -89303640 + AT_rich Low_complexity Low_complexity 1 22 0 3808 109 231 76 chr5 113782340 113783656 -89301876 + pTR5 LTR ERV1 743 2438 0 207 0 0 0 chr5 113783893 113783916 -89301616 + (CA)n Simple_repeat Simple_repeat 2 24 0 347 250 134 71 chr5 113785525 113785793 -89299739 + L1M2 LINE L1 679 963 -5886 543 176 0 0 chr5 113787132 113787217 -89298315 + AluJb SINE Alu 207 291 -21 2045 120 10 3 chr5 113787490 113787782 -89297750 + AluSg SINE Alu 1 294 -16 1785 164 20 23 chr5 113788205 113788504 -89297028 + AluJb SINE Alu 3 300 -12 333 47 0 0 chr5 113788513 113788556 -89296976 + (T)n Simple_repeat Simple_repeat 1 43 0 411 335 37 16 chr5 113789067 113789258 -89296274 + MIR SINE MIR 65 259 -3 22 56 0 0 chr5 113789312 113789348 -89296184 + AT_rich Low_complexity Low_complexity 1 36 0 467 331 26 7 chr5 113789397 113789551 -89295981 - L2 LINE L2 0 3272 3116 25 31 0 0 chr5 113789551 113789583 -89295949 + AT_rich Low_complexity Low_complexity 1 32 0 207 306 71 20 chr5 113789683 113789781 -89295751 - L2 LINE L2 -200 3072 2970 865 241 59 53 chr5 113789807 113790127 -89295405 - MER102b DNA MER1_type -18 323 2 321 296 69 21 chr5 113790258 113790447 -89295085 - L2 LINE L2 -584 2730 2533 1496 239 61 20 chr5 113790461 113790905 -89294627 + LTR40b LTR ERVL 1 462 0 995 143 10 46 chr5 113790905 113791101 -89294431 - MER3 DNA MER1_type -20 189 1 554 303 103 59 chr5 113793780 113793932 -89291600 - L2 LINE L2 -1 3271 3127 210 71 0 0 chr5 113793932 113793960 -89291572 + (CAA)n Simple_repeat Simple_repeat 3 30 0 554 303 103 59 chr5 113793960 113794484 -89291048 - L2 LINE L2 -145 3127 2550 958 291 30 81 chr5 113794556 113795051 -89290481 - L2 LINE L2 -1 3312 2843 287 291 81 34 chr5 113795689 113795837 -89289695 + MIR SINE MIR 64 218 -44 1802 167 115 12 chr5 113796022 113796441 -89289091 - MLT1C LTR MaLR -2 465 4 3539 122 8 2 chr5 113796553 113797077 -89288455 - MER1A DNA MER1_type 0 527 1 243 61 0 0 chr5 113797370 113797403 -89288129 + (T)n Simple_repeat Simple_repeat 1 33 0 399 268 0 18 chr5 113798310 113798422 -89287110 - MIR SINE MIR -128 134 25 231 304 13 25 chr5 113798432 113798511 -89287021 + MIR SINE MIR 168 245 -17 21 36 0 0 chr5 113798626 113798654 -89286878 + AT_rich Low_complexity Low_complexity 1 28 0 9409 138 26 19 chr5 113798654 113801318 -89284214 - L1MA3 LINE L1 0 6305 3623 729 231 21 66 chr5 113802440 113802682 -89282850 + MIR SINE MIR 32 262 0 257 304 98 0 chr5 113802691 113802793 -89282739 - MIR SINE MIR -44 218 107 1331 189 109 23 chr5 113803780 113804082 -89281450 - MER58B DNA MER1_type -1 340 13 4249 92 27 11 chr5 113804168 113804800 -89280732 - L1PA14 LINE L1 -1 6160 5519 221 283 29 26 chr5 113804818 113804992 -89280540 + MIR SINE MIR 2 220 -42 453 287 77 98 chr5 113805067 113805610 -89279922 - L1M4 LINE L1 -753 5393 4862 6649 72 13 0 chr5 113805773 113807071 -89278461 - L1PA10 LINE L1 -1 6167 4861 554 162 36 0 chr5 113807090 113807201 -89278331 - L1MB2 LINE L1 -7 6164 6050 357 350 55 20 chr5 113807683 113807883 -89277649 + L2 LINE L2 3017 3223 -90 200 204 0 23 chr5 113807886 113807930 -89277602 + MIR SINE MIR 215 257 -5 520 233 8 15 chr5 113809535 113809668 -89275864 - MER20B DNA MER1_type -4 779 648 222 171 0 0 chr5 113809668 113809709 -89275823 + (TA)n Simple_repeat Simple_repeat 2 42 0 954 182 14 23 chr5 113809709 113809923 -89275609 - MER20B DNA MER1_type -131 652 441 2693 73 88 24 chr5 113809957 113810332 -89275200 + MLT2A1 LTR ERVL 1 406 -38 453 81 0 0 chr5 113810332 113810394 -89275138 + (TA)n Simple_repeat Simple_repeat 2 63 0 2693 73 88 24 chr5 113810394 113810428 -89275104 + MLT2A1 LTR ERVL 406 436 -8 1066 219 52 0 chr5 113810431 113810641 -89274891 + Tigger7 DNA MER2_type 43 263 -287 571 204 0 0 chr5 113810645 113810743 -89274789 + Tigger7 DNA MER2_type 2390 2487 0 1109 273 81 24 chr5 113810743 113811161 -89274371 - MER20B DNA MER1_type -341 442 1 1160 155 33 24 chr5 113811171 113811193 -89274339 - MER20B DNA MER1_type -3 216 196 944 61 15 0 chr5 113811193 113811324 -89274208 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 1160 155 33 24 chr5 113811324 113811514 -89274018 - MER20B DNA MER1_type -23 196 2 189 345 167 6 chr5 113811865 113812039 -89273493 - MIR3 SINE MIR -3 205 4 21 0 0 0 chr5 113812057 113812078 -89273454 + AT_rich Low_complexity Low_complexity 1 21 0 566 248 103 39 chr5 113812247 113812481 -89273051 - MIR SINE MIR -2 260 12 210 171 0 0 chr5 113813136 113813177 -89272355 + CT-rich Low_complexity Low_complexity 1 41 0 315 0 0 0 chr5 113813177 113813212 -89272320 + (TG)n Simple_repeat Simple_repeat 2 36 0 347 140 0 0 chr5 113813614 113813664 -89271868 - MER45 DNA AcHobo 0 1581 1532 413 133 86 57 chr5 113813668 113813773 -89271759 + MER53 DNA DNA 4 111 -78 364 246 167 0 chr5 113813788 113813914 -89271618 - Charlie2 DNA MER1_type -861 2001 1855 596 283 185 11 chr5 113813915 113814191 -89271341 - Charlie2 DNA MER1_type -2457 325 2 294 315 75 45 chr5 113814288 113814355 -89271177 + L2 LINE L2 2736 2799 -514 2395 55 10 0 chr5 113814355 113814644 -89270888 - AluY SINE Alu -19 292 1 294 315 75 45 chr5 113814644 113814850 -89270682 + L2 LINE L2 2799 3017 -296 180 293 17 17 chr5 113814990 113815048 -89270484 + L2 LINE L2 3155 3212 -60 235 235 49 39 chr5 113815146 113815248 -89270284 - MIR SINE MIR -10 252 150 210 122 122 20 chr5 113815372 113815421 -89270111 - MER5A DNA MER1_type 0 189 136 453 45 45 0 chr5 113815513 113815579 -89269953 - L1PA8 LINE L1 -2 6170 6102 756 224 22 28 chr5 113815619 113815798 -89269734 + MER5A DNA MER1_type 12 189 0 636 288 83 18 chr5 113816649 113816878 -89268654 + MIR SINE MIR 19 262 0 21 0 0 0 chr5 113817359 113817380 -89268152 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 113818668 113818691 -89266841 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 113819011 113819033 -89266499 + AT_rich Low_complexity Low_complexity 1 22 0 3295 153 7 2 chr5 113819714 113820270 -89265262 + L1MB3 LINE L1 5621 6179 -4 22 0 0 0 chr5 113820461 113820483 -89265049 + AT_rich Low_complexity Low_complexity 1 22 0 269 281 0 0 chr5 113820483 113820540 -89264992 + L2 LINE L2 3209 3265 -7 215 313 31 0 chr5 113820801 113820865 -89264667 - MIR SINE MIR -92 170 105 989 269 94 46 chr5 113821250 113821812 -89263720 - L1ME4a LINE L1 -23 6098 5510 26 50 0 0 chr5 113821885 113821925 -89263607 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 113822090 113822113 -89263419 + AT_rich Low_complexity Low_complexity 1 23 0 1611 158 20 24 chr5 113823695 113823987 -89261545 + AluJb SINE Alu 1 291 -21 21 0 0 0 chr5 113824463 113824484 -89261048 + AT_rich Low_complexity Low_complexity 1 21 0 1975 143 3 3 chr5 113825356 113825664 -89259868 + AluJb SINE Alu 1 308 -4 665 290 23 6 chr5 113827195 113827371 -89258161 + MIR SINE MIR 69 247 -15 29 0 0 0 chr5 113827775 113827804 -89257728 + AT_rich Low_complexity Low_complexity 1 29 0 233 401 52 6 chr5 113829877 113830049 -89255483 + MIR SINE MIR 4 183 -79 304 202 34 11 chr5 113830167 113830256 -89255276 - MER117 DNA MER1_type -106 91 1 321 324 36 0 chr5 113830422 113830533 -89254999 + L2 LINE L2 2226 2340 -974 659 302 73 53 chr5 113830546 113830904 -89254628 + L2 LINE L2 2864 3228 -85 539 263 26 13 chr5 113830917 113831073 -89254459 - MIR SINE MIR -81 181 24 22 35 0 0 chr5 113831433 113831462 -89254070 + AT_rich Low_complexity Low_complexity 1 29 0 2773 7 0 16 chr5 113832221 113832531 -89253001 - AluY SINE Alu -6 305 1 21 0 0 0 chr5 113833046 113833067 -89252465 + AT_rich Low_complexity Low_complexity 1 21 0 370 237 163 0 chr5 113833227 113833362 -89252170 - MIR SINE MIR -1 261 105 1205 167 5 28 chr5 113833364 113833579 -89251953 + AluJo SINE Alu 81 290 -22 831 48 0 0 chr5 113833579 113833683 -89251849 + (GGAA)n Simple_repeat Simple_repeat 3 106 0 21 71 0 0 chr5 113834179 113834221 -89251311 + AT_rich Low_complexity Low_complexity 1 42 0 2251 117 3 0 chr5 113835506 113835815 -89249717 - AluSg SINE Alu 0 310 1 206 309 0 12 chr5 113836971 113837055 -89248477 + (TA)n Simple_repeat Simple_repeat 1 83 0 686 136 45 38 chr5 113839683 113839815 -89245717 + FLAM_C SINE Alu 1 133 0 2339 77 10 0 chr5 113840996 113841294 -89244238 + AluSp SINE Alu 1 301 -12 2159 171 44 38 chr5 113841600 113842098 -89243434 - MLT1D LTR MaLR -2 503 3 222 37 0 0 chr5 113845044 113845071 -89240461 + (TC)n Simple_repeat Simple_repeat 2 28 0 301 229 12 36 chr5 113845073 113845156 -89240376 + L1MC4 LINE L1 6624 6704 -1338 192 326 0 0 chr5 113845624 113845673 -89239859 - L2 LINE L2 -18 3295 3247 184 114 86 0 chr5 113846870 113846905 -89238627 - L2 LINE L2 -94 3219 3182 1450 271 152 25 chr5 113846951 113847544 -89237988 + L2 LINE L2 1745 2412 -902 414 285 144 4 chr5 113847545 113847815 -89237717 - L1ME4a LINE L1 -104 6017 5710 720 273 58 97 chr5 113847834 113847848 -89237684 + L2 LINE L2 2573 2586 -727 1233 211 19 22 chr5 113847848 113848171 -89237361 + MER33 DNA MER1_type 2 323 -1 720 273 58 97 chr5 113848171 113848792 -89236740 + L2 LINE L2 2586 3239 -74 195 333 210 28 chr5 113849116 113849407 -89236125 + L2 LINE L2 2929 3272 0 254 225 12 12 chr5 113849927 113850007 -89235525 + (TA)n Simple_repeat Simple_repeat 2 81 0 22 70 0 0 chr5 113850599 113850642 -89234890 + AT_rich Low_complexity Low_complexity 1 43 0 701 218 198 25 chr5 113852128 113852330 -89233202 - MIR SINE MIR -2 260 24 4530 166 33 20 chr5 113852341 113853207 -89232325 - MER6 DNA MER2_type -26 839 -35 25 0 0 0 chr5 113855380 113855405 -89230127 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 113855727 113855748 -89229784 + AT_rich Low_complexity Low_complexity 1 21 0 271 361 28 7 chr5 113856054 113856198 -89229334 + MIR SINE MIR 20 166 -96 1084 201 19 5 chr5 113856200 113856409 -89229123 + AluJo SINE Alu 89 300 -12 289 327 77 0 chr5 113856486 113856590 -89228942 + MIR SINE MIR 47 158 -104 28 29 0 0 chr5 113856694 113856729 -89228803 + AT_rich Low_complexity Low_complexity 1 35 0 1018 142 114 24 chr5 113857717 113857928 -89227604 + MER46A DNA MER2_type 5 234 -2 2181 4 0 0 chr5 113858211 113858448 -89227084 - AluYb8 SINE Alu 0 318 82 1625 181 0 30 chr5 113858600 113858904 -89226628 + AluSx SINE Alu 1 295 -17 467 247 129 12 chr5 113859061 113859231 -89226301 + MIR SINE MIR 67 256 -6 650 164 18 0 chr5 113859462 113859572 -89225960 - FLAM_A SINE Alu -8 134 23 213 264 126 0 chr5 113859573 113859660 -89225872 + MIR SINE MIR 164 261 -1 2454 68 0 10 chr5 113859907 113860217 -89225315 - AluY SINE Alu -4 307 1 279 0 0 0 chr5 113861428 113861459 -89224073 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 339 316 0 21 chr5 113861644 113861739 -89223793 - MIR3 SINE MIR -114 94 2 198 0 0 0 chr5 113862417 113862439 -89223093 + (TC)n Simple_repeat Simple_repeat 1 22 0 1599 144 111 3 chr5 113862921 113863227 -89222305 - MER44D DNA MER2_type 0 609 1 23 33 0 0 chr5 113863235 113863265 -89222267 + AT_rich Low_complexity Low_complexity 1 30 0 380 306 69 73 chr5 113863374 113863635 -89221897 + MIR SINE MIR 2 261 -1 1106 249 83 34 chr5 113864886 113865389 -89220143 - L2 LINE L2 -4 3309 2787 268 310 11 11 chr5 113865389 113865476 -89220056 - L2 LINE L2 -634 2680 2594 771 201 0 0 chr5 113866938 113867077 -89218455 - FLAM_C SINE Alu -2 141 3 376 235 162 37 chr5 113867239 113867375 -89218157 - L2 LINE L2 -2 3311 3159 351 0 0 0 chr5 113867408 113867447 -89218085 + (GA)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr5 113869108 113869132 -89216400 + AT_rich Low_complexity Low_complexity 1 24 0 388 259 75 34 chr5 113869557 113869704 -89215828 - L1ME3A LINE L1 -3 6167 6015 1246 118 0 0 chr5 113869936 113870106 -89215426 + AluSg/x SINE Alu 134 303 -9 968 310 43 2 chr5 113870203 113870597 -89214935 + L1M4 LINE L1 3753 4162 -1984 628 307 63 21 chr5 113871078 113871497 -89214035 - MLT1J LTR MaLR 0 511 19 351 0 0 0 chr5 113871954 113871993 -89213539 + (CA)n Simple_repeat Simple_repeat 2 40 0 303 322 153 42 chr5 113872215 113872641 -89212891 + L1M4 LINE L1 4560 5032 -1114 198 0 0 0 chr5 113872753 113872775 -89212757 + (TA)n Simple_repeat Simple_repeat 2 23 0 2249 122 48 20 chr5 113872818 113873172 -89212360 + THE1B LTR MaLR 1 364 0 3248 187 83 4 chr5 113873882 113874823 -89210709 + L1MD2 LINE L1 4950 5969 -390 747 159 16 0 chr5 113874820 113874946 -89210586 + L1MD2 LINE L1 6209 6336 -23 * 1732 135 4 11 chr5 113874946 113875213 -89210319 + AluJo SINE Alu 18 282 -30 31 26 0 0 chr5 113875215 113875253 -89210279 + AT_rich Low_complexity Low_complexity 1 38 0 333 247 39 0 chr5 113875288 113875365 -89210167 - MIR SINE MIR -136 126 47 426 229 257 0 chr5 113875552 113875696 -89209836 - MER5A DNA MER1_type 0 189 9 267 349 133 9 chr5 113876896 113877114 -89208418 + L2 LINE L2 2829 3073 -199 1768 104 0 0 chr5 113877760 113877990 -89207542 + AluSq SINE Alu 58 287 -26 225 250 19 0 chr5 113878674 113878726 -89206806 + CT-rich Low_complexity Low_complexity 2 54 0 270 319 35 26 chr5 113879082 113879195 -89206337 + HAL1 LINE L1 798 911 -1596 1244 261 67 35 chr5 113879223 113879772 -89205760 + HAL1 LINE L1 1082 1648 -859 1032 234 124 33 chr5 113879798 113879821 -89205711 + HAL1 LINE L1 2047 2067 -440 2412 68 6 6 chr5 113879821 113880132 -89205400 + AluY SINE Alu 1 311 0 1032 234 124 33 chr5 113880132 113880527 -89205005 + HAL1 LINE L1 2067 2503 -4 207 315 55 0 chr5 113880657 113880730 -89204802 - L2 LINE L2 -3 3269 3193 604 213 73 13 chr5 113881075 113881225 -89204307 - MLT1I LTR MaLR -154 255 97 25 65 0 0 chr5 113882860 113882906 -89202626 + AT_rich Low_complexity Low_complexity 1 46 0 27 0 0 0 chr5 113883213 113883240 -89202292 + AT_rich Low_complexity Low_complexity 1 27 0 736 284 41 5 chr5 113884582 113884800 -89200732 + MIR SINE MIR 37 262 0 180 0 0 0 chr5 113887244 113887264 -89198268 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 632 246 50 6 chr5 113887773 113887952 -89197580 - Charlie8 DNA MER1_type -2132 285 99 893 246 78 4 chr5 113888145 113888377 -89197155 + MIR SINE MIR 14 262 0 597 249 166 28 chr5 113888478 113888695 -89196837 + MIR SINE MIR 16 262 0 1302 160 33 0 chr5 113888844 113889056 -89196476 + MER20 DNA MER1_type 1 219 0 24 0 0 0 chr5 113889189 113889213 -89196319 + AT_rich Low_complexity Low_complexity 1 24 0 6167 137 68 25 chr5 113889384 113889882 -89195650 + Tigger3b DNA MER2_type 1 476 -2552 324 0 0 0 chr5 113889882 113889918 -89195614 + (TG)n Simple_repeat Simple_repeat 2 37 0 6167 137 68 25 chr5 113889918 113890599 -89194933 + Tigger3b DNA MER2_type 476 1230 -1 248 196 0 0 chr5 113890931 113890977 -89194555 + L1MC4 LINE L1 6894 6939 -1103 1706 152 0 18 chr5 113890977 113891253 -89194279 + AluJb SINE Alu 31 301 -11 2319 217 44 26 chr5 113891259 113891405 -89194127 + L1MC4 LINE L1 7285 7427 -615 1976 210 135 6 chr5 113891405 113891885 -89193647 + MLT1F LTR MaLR 1 542 0 2319 217 44 26 chr5 113891885 113892390 -89193142 + L1MC4 LINE L1 7427 8037 -5 1994 159 0 0 chr5 113892434 113892736 -89192796 + AluJb SINE Alu 1 302 -10 344 251 55 47 chr5 113892773 113893008 -89192524 - L1MC/D LINE L1 -387 5734 5610 343 272 158 0 chr5 113893098 113893212 -89192320 + L2 LINE L2 3171 3302 -11 860 243 96 0 chr5 113893228 113893446 -89192086 - MIR SINE MIR -20 242 4 23 33 0 0 chr5 113893536 113893566 -89191966 + AT_rich Low_complexity Low_complexity 1 30 0 32 67 0 0 chr5 113894226 113894286 -89191246 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr5 113894302 113894323 -89191209 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 113894680 113894701 -89190831 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 113894710 113894732 -89190800 + (TA)n Simple_repeat Simple_repeat 2 23 0 22 70 0 0 chr5 113897509 113897552 -89187980 + AT_rich Low_complexity Low_complexity 1 43 0 271 383 80 6 chr5 113899637 113899812 -89185720 + MLT1K LTR MaLR 81 268 -320 249 188 75 50 chr5 113900901 113900981 -89184551 - MIR3 SINE MIR -14 194 113 292 250 143 50 chr5 113901704 113901844 -89183688 + MIR SINE MIR 99 251 -11 335 60 60 0 chr5 113902234 113902301 -89183231 + (TA)n Simple_repeat Simple_repeat 1 71 0 1240 118 5 0 chr5 113903447 113903634 -89181898 + L1PA15 LINE L1 5977 6164 -1 287 353 43 0 chr5 113904143 113904282 -89181250 + MER117 DNA MER1_type 2 146 -51 189 269 0 19 chr5 113904604 113904656 -89180876 - MIR SINE MIR -102 160 110 22 70 0 0 chr5 113905118 113905161 -89180371 + AT_rich Low_complexity Low_complexity 1 43 0 492 333 38 24 chr5 113905318 113905575 -89179957 - MIR SINE MIR -10 252 2 1724 173 3 3 chr5 113905726 113906039 -89179493 - AluJo SINE Alu 0 313 1 650 243 129 25 chr5 113906203 113906405 -89179127 - MER58A DNA MER1_type -1 223 1 1007 319 16 24 chr5 113906620 113907072 -89178460 + L2 LINE L2 2398 2845 -469 2356 197 25 11 chr5 113907093 113907588 -89177944 - MER67A LTR ERV1 0 661 1 648 243 61 0 chr5 113907610 113907758 -89177774 + MIR SINE MIR 54 210 -52 1761 148 17 10 chr5 113908293 113908591 -89176941 + AluJo SINE Alu 1 300 -12 4745 109 107 14 chr5 113908759 113909464 -89176068 + Tigger3b DNA MER2_type 1 640 -2389 2406 67 0 13 chr5 113909464 113909776 -89175756 - AluY SINE Alu -3 308 1 4745 109 107 14 chr5 113909776 113909927 -89175605 + Tigger3b DNA MER2_type 640 776 -2253 2136 119 132 26 chr5 113909927 113910314 -89175218 + MSTA LTR MaLR 1 428 0 4745 109 107 14 chr5 113910314 113910543 -89174989 + Tigger3b DNA MER2_type 776 1231 -1 1714 192 0 0 chr5 113910543 113910840 -89174692 + AluJo SINE Alu 1 297 -15 331 320 95 61 chr5 113910917 113911392 -89174140 + L1ME LINE L1 2676 3166 -2980 22 0 0 0 chr5 113911642 113911664 -89173868 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr5 113911664 113911695 -89173837 + (CA)n Simple_repeat Simple_repeat 2 32 0 387 267 61 38 chr5 113911819 113912082 -89173450 + L1ME LINE L1 5351 5618 -503 6842 153 25 6 chr5 113912230 113912591 -89172941 - L1PB1 LINE L1 0 6151 5798 531 0 0 0 chr5 113912591 113912650 -89172882 + (TA)n Simple_repeat Simple_repeat 1 59 0 6842 153 25 6 chr5 113912650 113914533 -89170999 - L1PB1 LINE L1 -353 5798 3870 233 323 0 43 chr5 113917346 113917439 -89168093 + L2 LINE L2 3182 3270 -2 347 234 26 0 chr5 113917531 113917608 -89167924 + L2 LINE L2 3182 3260 -12 1621 198 68 24 chr5 113917631 113918045 -89167487 + MSTB1 LTR MaLR 1 432 0 465 350 41 0 chr5 113918251 113918448 -89167084 + L2 LINE L2 2850 3054 -218 21 36 0 0 chr5 113919376 113919404 -89166128 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 113919517 113919545 -89165987 + AT_rich Low_complexity Low_complexity 1 28 0 1581 271 55 2 chr5 113919638 113920110 -89165422 + LTR33 LTR ERVL 1 497 -24 799 206 59 52 chr5 113920568 113920840 -89164692 - L1MC5 LINE L1 -476 7485 7212 368 256 77 32 chr5 113920899 113921055 -89164477 - L1MC5 LINE L1 -733 7228 7066 1571 255 29 38 chr5 113922524 113923003 -89162529 + MLT1L LTR MaLR 139 613 -2 928 316 129 15 chr5 113924906 113925511 -89160021 + L2 LINE L2 1973 2646 -668 376 284 84 21 chr5 113925812 113926002 -89159530 + L2 LINE L2 3112 3313 0 201 341 98 8 chr5 113926826 113926949 -89158583 + L3 LINE CR1 933 1066 -511 221 284 211 0 chr5 113927010 113927105 -89158427 - L2 LINE L2 -8 3305 3191 502 211 0 16 chr5 113927932 113928060 -89157472 - L1MA9 LINE L1 -38 6274 6149 239 319 49 42 chr5 113929383 113929527 -89156005 + MIR SINE MIR 47 191 -71 228 143 0 0 chr5 113929580 113929622 -89155910 + (TCCCC)n Simple_repeat Simple_repeat 2 43 0 706 257 139 58 chr5 113930218 113930801 -89154731 - MER67B LTR ERV1 0 661 32 201 213 0 0 chr5 113932372 113932419 -89153113 + GA-rich Low_complexity Low_complexity 3 49 0 240 233 23 9 chr5 113934164 113934260 -89151272 - MIR SINE MIR -19 189 90 216 250 0 0 chr5 113936223 113936267 -89149265 + (TG)n Simple_repeat Simple_repeat 2 45 0 591 265 174 9 chr5 113937035 113937254 -89148278 + MIR SINE MIR 1 255 -7 6205 23 0 0 chr5 113937791 113939017 -89146515 - L1PA2 LINE L1 -283 5872 4647 2053 44 0 0 chr5 113939017 113939268 -89146264 + L1PA2 LINE L1 5905 6155 0 21 0 0 0 chr5 113939268 113939289 -89146243 + AT_rich Low_complexity Low_complexity 1 21 0 202 290 43 29 chr5 113940190 113940259 -89145273 + MER5B DNA MER1_type 109 178 0 22 35 0 0 chr5 113941728 113941757 -89143775 + AT_rich Low_complexity Low_complexity 1 29 0 219 346 96 38 chr5 113942379 113942619 -89142913 + L2 LINE L2 2084 2337 -977 183 316 0 51 chr5 113943115 113943194 -89142338 + L2 LINE L2 3180 3254 -59 24 0 0 0 chr5 113943758 113943782 -89141750 + AT_rich Low_complexity Low_complexity 1 24 0 883 197 69 0 chr5 113944788 113944976 -89140556 + L1PA16 LINE L1 5950 6150 -16 418 344 68 21 chr5 113945119 113945356 -89140176 - MIR SINE MIR -14 248 3 227 381 57 0 chr5 113945445 113945550 -89139982 - L2 LINE L2 -7 3265 3155 329 308 45 45 chr5 113946625 113946758 -89138774 + MIR3 SINE MIR 73 205 -3 345 108 39 20 chr5 113947166 113947268 -89138264 + (TA)n Simple_repeat Simple_repeat 1 104 0 2065 131 7 3 chr5 113947268 113947573 -89137959 - AluSx SINE Alu -6 306 1 21 71 0 0 chr5 113948362 113948404 -89137128 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr5 113949003 113949042 -89136490 + AT_rich Low_complexity Low_complexity 1 39 0 563 328 8 29 chr5 113950658 113950896 -89134636 + MIR SINE MIR 1 233 -29 436 298 18 0 chr5 113950916 113951030 -89134502 - L2 LINE L2 0 3313 3198 237 178 119 6 chr5 113952529 113952614 -89132918 + MIR SINE MIR 20 121 -87 34 42 0 0 chr5 113952706 113952754 -89132778 + AT_rich Low_complexity Low_complexity 1 48 0 245 363 40 66 chr5 113953043 113953316 -89132216 - L2 LINE L2 -359 2955 2690 261 169 19 136 chr5 114004165 114004319 -89081213 - LTR49-int LTR ERV1 -1913 4685 4550 375 219 8 73 chr5 114004693 114004816 -89080716 - LTR49-int LTR ERV1 -3674 3084 2970 * 497 210 14 53 chr5 114004789 114005052 -89080480 - LTR49-int LTR ERV1 -2021 3592 1554 28 0 0 0 chr5 114005214 114005242 -89080290 + AT_rich Low_complexity Low_complexity 1 28 0 20220 32 1 1 chr5 114005242 114008467 -89077065 - L1PA4 LINE L1 -11 6144 2921 214 242 30 0 chr5 114009872 114009938 -89075594 + (TA)n Simple_repeat Simple_repeat 1 68 0 1457 46 92 32 chr5 114010270 114010487 -89075045 - MER30 DNA MER1_type 0 230 1 183 42 0 0 chr5 114010574 114010598 -89074934 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 181 216 198 81 chr5 114010649 114010760 -89074772 - L2 LINE L2 -11 3302 3179 205 346 43 49 chr5 114010943 114011128 -89074404 - L2 LINE L2 -337 2977 2794 354 272 220 16 chr5 114011429 114011620 -89073912 + MIR SINE MIR 32 261 -1 282 29 0 0 chr5 114012307 114012342 -89073190 + (TC)n Simple_repeat Simple_repeat 1 35 0 2008 118 38 0 chr5 114012715 114013004 -89072528 + AluSx SINE Alu 3 302 -10 395 185 11 0 chr5 114013006 114013098 -89072434 + (TA)n Simple_repeat Simple_repeat 1 93 0 363 127 0 0 chr5 114013098 114013153 -89072379 + Alu SINE Alu 243 297 -4 26 0 0 0 chr5 114013153 114013179 -89072353 + AT_rich Low_complexity Low_complexity 1 26 0 253 291 0 25 chr5 114013197 114013276 -89072256 + MIR SINE MIR 180 256 -6 884 252 93 3 chr5 114015105 114015395 -89070137 - MER46C DNA MER2_type -1 337 22 474 293 131 48 chr5 114015733 114016191 -89069341 - L1MC4a LINE L1 -1837 5971 5476 287 336 24 16 chr5 114016305 114016430 -89069102 + MER5A DNA MER1_type 1 126 -63 2465 187 107 72 chr5 114016433 114017290 -89068242 - MER63C DNA MER1_type -8 922 1 216 288 0 15 chr5 114017290 114017356 -89068176 + MER5A DNA MER1_type 120 184 -5 303 320 0 6 chr5 114018148 114018253 -89067279 - MIR3 SINE MIR -41 167 64 25 31 0 0 chr5 114020395 114020427 -89065105 + AT_rich Low_complexity Low_complexity 1 32 0 435 38 0 0 chr5 114020721 114020774 -89064758 + (CA)n Simple_repeat Simple_repeat 2 54 0 229 90 45 45 chr5 114021038 114021127 -89064405 + (TA)n Simple_repeat Simple_repeat 2 90 0 353 182 81 0 chr5 114021432 114021531 -89064001 + L1ME3A LINE L1 6059 6165 -5 243 0 0 0 chr5 114022443 114022470 -89063062 + (A)n Simple_repeat Simple_repeat 1 27 0 1796 148 46 3 chr5 114023197 114023481 -89062051 - AluJb SINE Alu -16 296 1 362 277 6 107 chr5 114024230 114024389 -89061143 + MIR3 SINE MIR 61 203 -5 209 308 0 13 chr5 114025684 114025762 -89059770 - MIR SINE MIR 0 262 186 228 193 18 53 chr5 114025997 114026111 -89059421 + (TA)n Simple_repeat Simple_repeat 2 111 0 1471 215 91 59 chr5 114027567 114028022 -89057510 - MLT1F1 LTR MaLR 0 567 128 1914 85 15 11 chr5 114028022 114028293 -89057239 + L1PB1 LINE L1 5880 6151 0 1471 215 91 59 chr5 114028293 114028400 -89057132 - MLT1F1 LTR MaLR -439 128 25 1782 206 45 13 chr5 114028400 114028798 -89056734 - MLT2D LTR ERVL -3 411 1 1471 215 91 59 chr5 114028798 114028824 -89056708 - MLT1F1 LTR MaLR -542 25 1 24 53 0 0 chr5 114029123 114029161 -89056371 + AT_rich Low_complexity Low_complexity 1 38 0 264 77 0 0 chr5 114031234 114031273 -89054259 + (TG)n Simple_repeat Simple_repeat 2 40 0 672 175 49 0 chr5 114031345 114031488 -89054044 + L1 LINE L1 3852 4001 -2145 21 0 0 0 chr5 114032144 114032165 -89053367 + AT_rich Low_complexity Low_complexity 1 21 0 187 321 92 55 chr5 114032686 114032904 -89052628 + L3b LINE CR1 1116 1341 -242 2427 161 30 39 chr5 114034114 114034564 -89050968 + L1MA7 LINE L1 5724 6170 -121 1889 122 3 77 chr5 114034564 114034891 -89050641 + AluSq SINE Alu 1 303 -10 2427 161 30 39 chr5 114034891 114034998 -89050534 + L1MA7 LINE L1 6170 6276 -15 1550 103 16 8 chr5 114034998 114035233 -89050299 - L1PB2 LINE L1 -1 6150 5906 28 48 0 0 chr5 114035353 114035395 -89050137 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 114035625 114035646 -89049886 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 114036102 114036125 -89049407 + AT_rich Low_complexity Low_complexity 1 23 0 204 235 0 20 chr5 114036139 114036190 -89049342 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 180 217 22 0 chr5 114036322 114036368 -89049164 - L2 LINE L2 -1 3312 3266 286 325 24 0 chr5 114037054 114037180 -89048352 + (TATATG)n Simple_repeat Simple_repeat 3 131 0 217 173 58 0 chr5 114037879 114037931 -89047601 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2220 107 3 7 chr5 114038348 114038656 -89046876 - AluSg SINE Alu -2 308 2 23 33 0 0 chr5 114040256 114040286 -89045246 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 114042301 114042322 -89043210 + AT_rich Low_complexity Low_complexity 1 21 0 215 164 29 39 chr5 114044625 114044729 -89040803 + (TA)n Simple_repeat Simple_repeat 2 104 0 21 36 0 0 chr5 114045421 114045449 -89040083 + AT_rich Low_complexity Low_complexity 1 28 0 294 281 50 19 chr5 114045541 114045701 -89039831 - L1ME4a LINE L1 -157 5964 5800 324 0 0 0 chr5 114045995 114046031 -89039501 + (CA)n Simple_repeat Simple_repeat 2 37 0 2205 98 0 23 chr5 114048549 114048855 -89036677 - AluSx SINE Alu -13 299 1 422 281 185 6 chr5 114049179 114049357 -89036175 + MIR SINE MIR 53 262 0 386 284 78 0 chr5 114049418 114049534 -89035998 - MER94 DNA DNA -9 125 1 3922 56 4 0 chr5 114049574 114050076 -89035456 + L1PA7 LINE L1 5644 6147 -7 438 288 99 41 chr5 114050527 114050770 -89034762 - L2 LINE L2 -943 2371 2115 709 228 28 38 chr5 114051040 114051251 -89034281 - MER3 DNA MER1_type 0 209 1 2125 121 7 0 chr5 114051629 114051935 -89033597 - AluSx SINE Alu -2 310 3 21 0 0 0 chr5 114051998 114052019 -89033513 + AT_rich Low_complexity Low_complexity 1 21 0 186 301 82 71 chr5 114052074 114052257 -89033275 - MIR SINE MIR -1 261 77 256 267 178 20 chr5 114052342 114052443 -89033089 - L2 LINE L2 -253 3060 2944 481 185 0 0 chr5 114053039 114053120 -89032412 + AluSg/x SINE Alu 201 281 -28 1801 176 0 0 chr5 114053169 114053459 -89032073 - AluJo SINE Alu -22 290 1 339 318 7 27 chr5 114056411 114056559 -89028973 + MER5A DNA MER1_type 4 148 -41 402 115 0 0 chr5 114058521 114058582 -89026950 + (CA)n Simple_repeat Simple_repeat 2 62 0 709 287 49 20 chr5 114058650 114058894 -89026638 + MIR SINE MIR 2 252 -10 385 264 104 8 chr5 114059787 114059912 -89025620 - MIR SINE MIR -124 138 2 384 59 0 0 chr5 114059915 114059966 -89025566 + (CA)n Simple_repeat Simple_repeat 1 51 0 24 53 0 0 chr5 114061726 114061764 -89023768 + AT_rich Low_complexity Low_complexity 1 38 0 10993 209 51 22 chr5 114062875 114064016 -89021516 + L1MA4A LINE L1 815 1921 -4927 1779 141 17 20 chr5 114064016 114064314 -89021218 + AluSx SINE Alu 1 297 -15 10993 209 51 22 chr5 114064314 114067510 -89018022 + L1MA4A LINE L1 1921 5283 -1565 2383 97 36 30 chr5 114067510 114067872 -89017660 + THE1B LTR MaLR 1 364 0 10993 209 51 22 chr5 114067872 114067919 -89017613 + L1MA4A LINE L1 5283 5327 -1521 3424 144 62 2 chr5 114067919 114068523 -89017009 + L1MA4A LINE L1 6346 6998 -7 228 347 27 0 chr5 114069359 114069434 -89016098 + L2 LINE L2 3187 3263 -9 697 143 50 6 chr5 114069453 114069614 -89015918 + GA-rich Low_complexity Low_complexity 4 171 0 1606 183 10 21 chr5 114070085 114070374 -89015158 + AluJb SINE Alu 1 286 -26 383 0 0 21 chr5 114070653 114070701 -89014831 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 452 285 104 0 chr5 114071952 114072096 -89013436 - MIR SINE MIR -102 160 2 280 346 25 50 chr5 114074821 114074980 -89010552 - MLT1K LTR MaLR -344 244 90 1225 321 167 15 chr5 114075074 114075860 -89009672 - L3 LINE CR1 -37 1540 636 195 322 51 42 chr5 114075868 114075986 -89009546 - L3 LINE CR1 -1213 364 246 270 375 44 0 chr5 114076424 114076560 -89008972 + MIR SINE MIR 32 173 -89 26 0 0 0 chr5 114076927 114076953 -89008579 + AT_rich Low_complexity Low_complexity 1 26 0 1396 174 32 12 chr5 114078230 114078483 -89007049 + AluJb SINE Alu 36 293 -19 21 57 0 0 chr5 114079553 114079588 -89005944 + AT_rich Low_complexity Low_complexity 1 35 0 484 148 144 0 chr5 114079588 114079713 -89005819 + L1MD1 LINE L1 6102 6359 0 1948 101 37 13 chr5 114079835 114080133 -89005399 - THE1C LTR MaLR 0 375 71 8594 125 14 35 chr5 114080133 114081504 -89004028 - THE1C-int LTR MaLR -236 1344 3 2418 90 17 39 chr5 114081506 114081863 -89003669 - THE1C LTR MaLR 0 375 27 24 0 0 0 chr5 114081913 114081937 -89003595 + AT_rich Low_complexity Low_complexity 1 24 0 280 0 0 0 chr5 114081965 114081996 -89003536 - THE1C LTR MaLR -344 31 1 303 71 0 0 chr5 114082963 114083005 -89002527 + (CA)n Simple_repeat Simple_repeat 2 43 0 226 250 375 0 chr5 114083677 114083805 -89001727 - MER5A DNA MER1_type 0 189 14 294 208 0 0 chr5 114084258 114084311 -89001221 - MER5B DNA MER1_type -2 176 124 393 147 13 0 chr5 114084316 114084391 -89001141 - L1M LINE L1 -904 5387 5312 1032 120 11 0 chr5 114084391 114084548 -89000984 + L1MA7 LINE L1 6105 6281 -10 215 279 128 23 chr5 114084551 114084637 -89000895 - MER5B DNA MER1_type -73 105 11 23 33 0 0 chr5 114085883 114085913 -88999619 + AT_rich Low_complexity Low_complexity 1 30 0 1570 186 33 35 chr5 114086324 114086690 -88998842 - MLT1A1 LTR MaLR 0 365 1 1609 180 3 11 chr5 114086865 114087192 -88998340 - AluJb SINE Alu 0 327 3 492 302 87 0 chr5 114087497 114087623 -88997909 + MIR3 SINE MIR 53 189 -19 450 53 0 0 chr5 114088123 114088180 -88997352 + (CA)n Simple_repeat Simple_repeat 1 57 0 21 57 0 0 chr5 114089198 114089233 -88996299 + AT_rich Low_complexity Low_complexity 1 35 0 879 146 38 0 chr5 114089269 114089427 -88996105 - L1MA7 LINE L1 -9 6282 6119 21 36 0 0 chr5 114089791 114089819 -88995713 + AT_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr5 114090976 114091014 -88994518 + AT_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr5 114091716 114091744 -88993788 + AT_rich Low_complexity Low_complexity 1 28 0 1640 72 7 65 chr5 114091744 114092022 -88993510 - L1MA2 LINE L1 0 6304 6043 426 53 0 0 chr5 114092304 114092361 -88993171 + (CA)n Simple_repeat Simple_repeat 1 57 0 6553 125 17 11 chr5 114092374 114093532 -88992000 - L1MA2 LINE L1 -295 6009 4832 2428 70 0 7 chr5 114093532 114093832 -88991700 + AluY SINE Alu 1 298 -13 6553 125 17 11 chr5 114093832 114094575 -88990957 - L1MA2 LINE L1 -1472 4832 4095 312 354 0 0 chr5 114094643 114094722 -88990810 - L2 LINE L2 -5 3267 3189 215 296 102 23 chr5 114096041 114096129 -88989403 - MIR SINE MIR -152 110 16 189 0 0 0 chr5 114098112 114098133 -88987399 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1680 122 174 10 chr5 114099757 114100045 -88985487 - MER1B DNA MER1_type -2 335 1 210 235 12 86 chr5 114100059 114100140 -88985392 - MER5A DNA MER1_type -1 188 114 * 237 311 123 9 chr5 114100104 114100210 -88985322 + MER5A DNA MER1_type 50 167 -22 196 258 65 32 chr5 114101270 114101332 -88984200 - L2 LINE L2 -3 3269 3206 24 0 0 0 chr5 114101806 114101830 -88983702 + AT_rich Low_complexity Low_complexity 1 24 0 522 265 130 11 chr5 114102038 114102223 -88983309 - MIR SINE MIR -54 208 2 306 165 243 48 chr5 114104690 114104793 -88980739 + MIR SINE MIR 129 251 -11 642 266 37 27 chr5 114105596 114105784 -88979748 - MIR SINE MIR -72 190 1 561 252 79 14 chr5 114106677 114106865 -88978667 + MIR SINE MIR 67 261 -1 290 314 67 0 chr5 114107552 114107657 -88977875 + L2 LINE L2 3202 3313 0 293 209 0 0 chr5 114107940 114108007 -88977525 + MER116 DNA Mariner 3 69 -11 281 296 148 9 chr5 114108099 114108207 -88977325 - L2 LINE L2 -1 3312 3190 24 0 0 0 chr5 114108703 114108727 -88976805 + AT_rich Low_complexity Low_complexity 1 24 0 559 292 89 25 chr5 114108741 114108943 -88976589 - MIR SINE MIR 0 262 48 24 0 0 0 chr5 114109696 114109720 -88975812 + AT_rich Low_complexity Low_complexity 1 24 0 325 194 16 0 chr5 114111031 114111093 -88974439 + AluJ/FLAM SINE Alu 1 63 -239 706 172 9 0 chr5 114111094 114111210 -88974322 + AluJo/FRAM SINE Alu 176 292 -20 452 292 45 51 chr5 114111655 114111833 -88973699 - MER5B DNA MER1_type -1 177 1 468 292 34 28 chr5 114112375 114112553 -88972979 - MER5A DNA MER1_type -7 182 4 311 295 166 0 chr5 114114573 114114712 -88970820 - MLT1K LTR MaLR -76 512 351 6470 165 122 58 chr5 114114723 114116245 -88969287 - MER52A LTR ERV1 -136 1619 1 363 286 90 11 chr5 114116251 114116364 -88969168 - MLT1K LTR MaLR -236 352 219 2416 174 26 7 chr5 114116364 114116788 -88968744 - MSTB1 LTR MaLR 0 432 1 363 286 90 11 chr5 114116788 114116852 -88968680 - MLT1K LTR MaLR -369 219 161 333 198 36 130 chr5 114117422 114117614 -88967918 - L1MC4 LINE L1 0 8042 7869 1351 282 95 11 chr5 114117699 114118404 -88967128 - L1MC4 LINE L1 -166 7876 7113 701 0 0 0 chr5 114119710 114119844 -88965688 + L1PA3 LINE L1 6067 6200 0 2679 3 0 77 chr5 114120060 114120397 -88965135 + AluYa5 SINE Alu 1 311 0 493 226 24 0 chr5 114120740 114120864 -88964668 - L1M4 LINE L1 -868 5278 5152 223 237 0 0 chr5 114120878 114120937 -88964595 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 282 277 24 0 chr5 114120937 114121020 -88964512 - MLT1K LTR MaLR -157 431 347 212 216 31 41 chr5 114122002 114122099 -88963433 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 193 378 96 0 chr5 114122638 114122773 -88962759 - L2 LINE L2 -2 3311 3164 2498 136 33 14 chr5 114122874 114123294 -88962238 + MSTA LTR MaLR 1 428 0 854 172 0 0 chr5 114123772 114123923 -88961609 - MSTB2 LTR MaLR 0 457 307 807 175 11 74 chr5 114123985 114124329 -88961203 - MER57A LTR ERV1 0 403 1 727 182 0 28 chr5 114124330 114124473 -88961059 - MER57A-int LTR ERV1 -2 7535 7397 365 208 66 0 chr5 114124473 114124579 -88960953 - LTR54B LTR ERV1 -160 338 226 717 129 26 0 chr5 114124643 114124759 -88960773 - LTR54B LTR ERV1 -379 119 1 3995 203 17 31 chr5 114124759 114125567 -88959965 - MER57A-int LTR ERV1 -393 7144 6349 1796 168 16 10 chr5 114125567 114125871 -88959661 + AluJb SINE Alu 1 306 -6 3995 203 17 31 chr5 114125871 114125997 -88959535 - MER57A-int LTR ERV1 -1188 6349 6223 263 257 14 0 chr5 114125951 114126021 -88959511 - MER70-int LTR ERVL -805 4218 4148 * 1656 185 33 14 chr5 114126355 114126433 -88959099 - MER57A-int LTR ERV1 -768 6180 6105 204 67 0 0 chr5 114126433 114126463 -88959069 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1656 185 33 14 chr5 114126463 114126813 -88958719 - MER57A-int LTR ERV1 -843 6105 3950 2683 171 2 19 chr5 114127157 114127679 -88957853 - MER57A-int LTR ERV1 -1716 5821 5309 40224 39 22 1 chr5 114127693 114133709 -88951823 + L1PA2 LINE L1 13 6155 0 3127 216 60 54 chr5 114133742 114134560 -88950972 - MER57A-int LTR ERV1 -1498 4744 3932 210 71 0 0 chr5 114134560 114134588 -88950944 + (TTA)n Simple_repeat Simple_repeat 2 29 0 3127 216 60 54 chr5 114134588 114135147 -88950385 - MER57A-int LTR ERV1 -2310 3932 1554 28 0 0 0 chr5 114135309 114135337 -88950195 + AT_rich Low_complexity Low_complexity 1 28 0 7531 45 0 1 chr5 114135337 114137035 -88948497 - L1PA4 LINE L1 -11 6144 4450 228 245 0 0 chr5 114137171 114137220 -88948312 + MER34 LTR ERV1 1 49 -493 1761 151 58 7 chr5 114137289 114137581 -88947951 - AluSx SINE Alu -5 307 1 755 206 86 14 chr5 114137813 114138022 -88947510 - MER34C LTR ERV1 -207 378 155 2513 104 94 10 chr5 114138258 114138661 -88946871 + MER41B LTR ERV1 1 437 -198 2015 129 50 15 chr5 114138660 114139000 -88946532 - THE1B LTR MaLR -12 352 1 * 1100 142 10 19 chr5 114139000 114139205 -88946327 + MER41B LTR ERV1 433 635 0 2909 224 30 56 chr5 114139205 114140048 -88945484 - MER57A-int LTR ERV1 -6712 825 5 600 174 18 0 chr5 114140052 114140161 -88945371 - MER57A LTR ERV1 0 403 293 1221 149 53 11 chr5 114140161 114140423 -88945109 + L1MB7 LINE L1 5898 6170 -14 207 105 0 26 chr5 114141834 114141872 -88943660 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 2375 269 57 9 chr5 114141928 114142669 -88942863 + L2 LINE L2 2258 3032 -281 338 280 64 23 chr5 114142669 114142887 -88942645 - L1ME3A LINE L1 -270 5900 5674 241 330 98 0 chr5 114142913 114143116 -88942416 - L1ME3A LINE L1 -559 5611 5389 252 263 21 53 chr5 114143215 114143310 -88942222 - LTR33 LTR ERVL -132 389 298 435 291 16 66 chr5 114143343 114143525 -88942007 - LTR33 LTR ERVL -304 217 45 2236 111 12 12 chr5 114143525 114143868 -88941664 + THE1C LTR MaLR 1 343 -32 180 0 0 0 chr5 114143878 114143898 -88941634 + (TAA)n Simple_repeat Simple_repeat 2 21 0 316 299 104 8 chr5 114143982 114144116 -88941416 - L1ME3A LINE L1 -1880 4266 4120 713 238 67 33 chr5 114144248 114144458 -88941074 + MER58A DNA MER1_type 2 218 -6 460 264 74 43 chr5 114144493 114144656 -88940876 + LTR33 LTR ERVL 3 170 -351 321 256 48 87 chr5 114144965 114145195 -88940337 - L1ME3A LINE L1 -2380 3766 3546 2183 125 0 6 chr5 114145472 114145805 -88939727 - AluSx SINE Alu 0 333 3 311 246 87 26 chr5 114145807 114146002 -88939530 - L1ME3A LINE L1 -2972 3174 2968 336 130 101 14 chr5 114146005 114146074 -88939458 - L1MB8 LINE L1 -1 6177 6103 3175 162 38 22 chr5 114146093 114146759 -88938773 - L1MB4 LINE L1 0 6180 5505 935 210 56 102 chr5 114146759 114146945 -88938587 - LTR8A LTR ERV1 -1 726 533 2325 109 0 6 chr5 114146945 114147257 -88938275 - AluSg SINE Alu 0 310 1 935 210 56 102 chr5 114147257 114147531 -88938001 - LTR8A LTR ERV1 -194 533 287 285 185 179 55 chr5 114147703 114147851 -88937681 - MER87 LTR ERV1 -395 146 1 961 145 105 61 chr5 114147851 114148122 -88937410 - L1MB4 LINE L1 -671 5509 5232 1790 182 3 3 chr5 114148168 114148470 -88937062 - AluJb SINE Alu -10 302 1 26 50 0 0 chr5 114148636 114148676 -88936856 + AT_rich Low_complexity Low_complexity 1 40 0 375 256 116 16 chr5 114149624 114149753 -88935779 + L2 LINE L2 3172 3313 0 227 346 65 9 chr5 114150048 114150155 -88935377 + MER115 DNA AcHobo 9 121 -572 604 250 260 0 chr5 114150303 114150507 -88935025 + MER115 DNA AcHobo 420 676 -17 1972 102 49 7 chr5 114150547 114150831 -88934701 + AluSq SINE Alu 1 296 -17 207 0 0 0 chr5 114150835 114150858 -88934674 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2800 172 85 6 chr5 114151443 114152840 -88932692 - L1MA9 LINE L1 -1 6547 4933 6179 134 38 11 chr5 114152849 114154474 -88931058 - L1PA8 LINE L1 -3 6479 4750 2157 121 22 28 chr5 114154474 114154837 -88930695 + THE1B LTR MaLR 1 361 -3 11096 111 8 1 chr5 114154840 114156395 -88929137 + THE1B-int LTR MaLR 1 1567 -13 2054 128 39 28 chr5 114156397 114156757 -88928775 + THE1B LTR MaLR 1 364 0 18926 165 28 25 chr5 114156757 114161398 -88924134 - L1PA8 LINE L1 -1707 4754 6 7669 209 79 82 chr5 114161403 114161943 -88923589 - L1MA9 LINE L1 -1434 4948 4408 778 206 32 7 chr5 114161943 114162098 -88923434 + MER2 DNA MER2_type 1 159 -186 7669 209 79 82 chr5 114162098 114162141 -88923391 - L1MA9 LINE L1 -1974 4408 4366 321 273 0 0 chr5 114162141 114162207 -88923325 + MER2 DNA MER2_type 271 336 -9 7669 209 79 82 chr5 114162207 114165742 -88919790 - L1MA9 LINE L1 -2016 4366 911 565 172 52 0 chr5 114165755 114165871 -88919661 - L1MB7 LINE L1 -49 6135 6014 494 324 69 19 chr5 114165894 114166156 -88919376 + MLT1I LTR MaLR 133 407 -2 281 399 105 18 chr5 114166708 114166911 -88918621 + L2 LINE L2 2566 2801 -513 2498 159 49 2 chr5 114166911 114167357 -88918175 - MLT1C LTR MaLR 0 467 1 281 399 105 18 chr5 114167357 114167429 -88918103 + L2 LINE L2 2801 2865 -449 24 53 0 0 chr5 114167808 114167846 -88917686 + AT_rich Low_complexity Low_complexity 1 38 0 1803 154 3 10 chr5 114167931 114168229 -88917303 - AluJb SINE Alu -14 298 3 25 51 0 0 chr5 114169162 114169201 -88916331 + AT_rich Low_complexity Low_complexity 1 39 0 1800 184 0 3 chr5 114169466 114169759 -88915773 + AluJb SINE Alu 1 292 -20 384 22 0 0 chr5 114170392 114170437 -88915095 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 953 181 0 0 chr5 114170437 114170581 -88914951 - AluJb SINE Alu -37 275 132 186 103 0 0 chr5 114170928 114170957 -88914575 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2025 135 7 0 chr5 114170964 114171246 -88914286 + AluSx SINE Alu 1 284 -28 261 57 0 0 chr5 114171847 114171882 -88913650 + (CA)n Simple_repeat Simple_repeat 1 35 0 643 147 39 32 chr5 114172157 114172313 -88913219 + Charlie5 DNA MER1_type 2428 2584 -28 245 121 0 0 chr5 114172658 114172691 -88912841 + Alu SINE Alu 2 34 -269 2226 115 0 0 chr5 114172698 114172994 -88912538 + AluSq SINE Alu 1 296 -17 1613 165 52 0 chr5 114172994 114173260 -88912272 - AluJb SINE Alu -31 281 1 30 27 0 0 chr5 114173277 114173314 -88912218 + AT_rich Low_complexity Low_complexity 1 37 0 1853 191 0 0 chr5 114173623 114173932 -88911600 + AluJo SINE Alu 4 312 0 2135 183 50 48 chr5 114174068 114174572 -88910960 + MLT1D LTR MaLR 1 505 0 21 36 0 0 chr5 114175599 114175627 -88909905 + AT_rich Low_complexity Low_complexity 1 28 0 1826 166 0 7 chr5 114176597 114176900 -88908632 + AluSx SINE Alu 1 301 0 2015 125 10 3 chr5 114177019 114177308 -88908224 + AluSq SINE Alu 3 293 -20 395 301 69 35 chr5 114177901 114178074 -88907458 - MIR SINE MIR -63 199 21 24 32 0 0 chr5 114178204 114178235 -88907297 + AT_rich Low_complexity Low_complexity 1 31 0 2266 107 0 0 chr5 114178847 114179138 -88906394 - AluSg SINE Alu -19 291 1 445 307 79 26 chr5 114179211 114179400 -88906132 - MIR SINE MIR 0 262 64 1417 174 93 0 chr5 114179458 114179716 -88905816 - AluJb SINE Alu -30 282 1 25 0 0 0 chr5 114179912 114179937 -88905595 + AT_rich Low_complexity Low_complexity 1 25 0 510 288 92 11 chr5 114180094 114180278 -88905254 + MLT1J LTR MaLR 101 299 -212 24 32 0 0 chr5 114180324 114180355 -88905177 + AT_rich Low_complexity Low_complexity 1 31 0 2808 235 174 31 chr5 114180531 114181059 -88904473 - Charlie7 DNA MER1_type -1199 1413 962 1540 159 88 11 chr5 114181059 114181342 -88904190 - AluJb SINE Alu -7 305 1 198 0 0 0 chr5 114181342 114181364 -88904168 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1465 200 32 25 chr5 114181364 114181649 -88903883 - AluJo SINE Alu -25 287 1 2808 235 174 31 chr5 114181649 114181894 -88903638 - Charlie7 DNA MER1_type -1650 962 753 2823 181 24 15 chr5 114181894 114182436 -88903096 - MER44D DNA MER2_type -3 602 1 2808 235 174 31 chr5 114182436 114182865 -88902667 - Charlie7 DNA MER1_type -1859 753 35 1837 174 33 30 chr5 114183309 114183587 -88901945 + MER119 DNA MER1_type 102 383 -200 1222 165 139 30 chr5 114183587 114183854 -88901678 + AluSg1 SINE Alu 1 296 -13 1837 174 33 30 chr5 114183854 114183943 -88901589 + MER119 DNA MER1_type 383 470 -113 1605 167 167 4 chr5 114183989 114184402 -88901130 + MER68 LTR ERV1 15 562 0 1063 168 0 0 chr5 114184759 114184914 -88900618 - AluJb SINE Alu -24 288 134 2015 127 3 0 chr5 114184914 114185198 -88900334 - AluSx SINE Alu -15 297 13 252 279 245 7 chr5 114185207 114185354 -88900178 - MIR3 SINE MIR -9 199 18 1010 231 4 40 chr5 114186011 114186258 -88899274 - MER8 DNA MER2_type 0 239 2 202 250 0 33 chr5 114186534 114186594 -88898938 - L2 LINE L2 -77 3236 3179 384 327 55 39 chr5 114186620 114186877 -88898655 + MARNA DNA Mariner 137 397 -189 461 311 8 0 chr5 114188576 114188695 -88896837 + L2 LINE L2 3190 3309 -4 311 311 120 0 chr5 114190116 114190283 -88895249 + LTR33 LTR ERVL 328 514 -7 1924 235 37 19 chr5 114190787 114191779 -88893753 + L1ME LINE L1 4729 5738 -424 249 139 0 0 chr5 114191869 114191905 -88893627 - MER5C DNA MER1_type 0 324 289 204 397 35 26 chr5 114193799 114193915 -88891617 - L2 LINE L2 -50 3222 3106 1783 162 24 56 chr5 114194192 114194479 -88891053 - MLT1A1 LTR MaLR 0 365 91 2223 123 0 0 chr5 114194479 114194779 -88890753 - AluSx SINE Alu -12 300 1 1783 162 24 56 chr5 114194779 114194868 -88890664 - MLT1A1 LTR MaLR -274 91 1 251 380 48 30 chr5 114195160 114195326 -88890206 - L2 LINE L2 -586 2728 2560 371 300 83 17 chr5 114196052 114196172 -88889360 - L2 LINE L2 0 3313 3186 2538 155 33 20 chr5 114196180 114196671 -88888861 + L1MB3 LINE L1 5684 6180 -3 279 320 109 0 chr5 114196695 114196851 -88888681 - L2 LINE L2 -1606 1708 1536 2651 225 88 4 chr5 114197003 114198311 -88887221 + L1ME1 LINE L1 4549 5959 -207 30 0 0 0 chr5 114198311 114198341 -88887191 + AT_rich Low_complexity Low_complexity 1 30 0 299 224 104 0 chr5 114198357 114198424 -88887108 + Tigger3(Golem) DNA MER2_type 7 80 -2949 440 260 39 0 chr5 114198556 114198660 -88886872 + Tigger3(Golem) DNA MER2_type 2920 3027 -2 464 331 51 6 chr5 114198695 114198870 -88886662 - MIR SINE MIR -76 186 4 189 339 68 0 chr5 114199012 114199071 -88886461 + L2 LINE L2 3209 3271 -1 532 301 42 32 chr5 114202259 114202475 -88883057 - MIR SINE MIR -44 218 1 512 268 59 33 chr5 114202908 114203180 -88882352 + L1MC4 LINE L1 7764 8042 0 192 267 153 97 chr5 114203310 114203486 -88882046 - L2 LINE L2 -219 3053 2868 496 240 198 5 chr5 114204113 114204305 -88881227 - MIR SINE MIR -3 259 31 620 168 193 19 chr5 114204305 114204466 -88881066 + MER5A DNA MER1_type 1 189 0 312 293 68 45 chr5 114204577 114204710 -88880822 + MER5A DNA MER1_type 54 189 0 2449 61 3 0 chr5 114204955 114205251 -88880281 + AluY SINE Alu 1 297 -14 282 286 54 45 chr5 114205393 114205505 -88880027 + MIR SINE MIR 26 138 -124 535 261 61 0 chr5 114206102 114206217 -88879315 - MER5B DNA MER1_type -3 175 54 605 227 113 27 chr5 114206219 114206404 -88879128 - MIR SINE MIR -50 212 12 256 328 84 8 chr5 114206474 114206593 -88878939 + L2 LINE L2 1698 1825 -1489 1894 118 4 0 chr5 114206593 114206856 -88878676 - AluSx SINE Alu -15 297 34 602 330 60 26 chr5 114206880 114207144 -88878388 + L2 LINE L2 2778 3050 -263 3147 83 11 41 chr5 114207444 114207911 -88877621 - MLT2A2 LTR ERVL 0 453 1 207 257 14 29 chr5 114208158 114208228 -88877304 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 283 323 110 0 chr5 114208346 114208473 -88877059 + L2 LINE L2 3167 3307 -6 195 252 261 45 chr5 114208574 114208685 -88876847 - MIR SINE MIR -14 248 114 24 32 0 0 chr5 114208989 114209020 -88876512 + AT_rich Low_complexity Low_complexity 1 31 0 342 0 0 0 chr5 114209343 114209381 -88876151 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 813 219 0 0 chr5 114209381 114209527 -88876005 - FRAM SINE Alu -30 146 1 1711 188 55 9 chr5 114212138 114212467 -88873065 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr5 114212615 114212639 -88872893 + AT_rich Low_complexity Low_complexity 1 24 0 2299 81 0 17 chr5 114213216 114213513 -88872019 + AluY SINE Alu 1 292 -19 23 68 0 0 chr5 114214233 114214277 -88871255 + AT_rich Low_complexity Low_complexity 1 44 0 759 242 170 29 chr5 114214640 114215058 -88870474 - L1ME4a LINE L1 -5 6116 5640 719 224 57 29 chr5 114216105 114216315 -88869217 - MIR SINE MIR 0 262 47 1531 193 17 10 chr5 114216388 114216684 -88868848 - AluJo SINE Alu -13 299 2 2206 112 0 3 chr5 114216925 114217229 -88868303 - AluSx SINE Alu -9 303 1 472 350 46 17 chr5 114217814 114218051 -88867481 - MIR SINE MIR -6 256 13 2484 50 0 0 chr5 114218120 114218418 -88867114 - AluY SINE Alu -13 298 1 314 248 92 48 chr5 114218963 114219169 -88866363 - L1ME4a LINE L1 -260 5861 5647 995 209 82 5 chr5 114219815 114220035 -88865497 - MER8 DNA MER2_type 0 239 3 567 167 26 0 chr5 114220241 114220355 -88865177 + L1MA3 LINE L1 13 129 -7436 4326 152 32 153 chr5 114220358 114221523 -88864009 + L1MA3 LINE L1 1849 2828 -4737 2409 24 41 0 chr5 114221523 114221813 -88863719 + AluY SINE Alu 1 302 -9 4326 152 32 153 chr5 114221813 114222007 -88863525 + L1MA3 LINE L1 2828 3044 -4521 909 80 0 0 chr5 114222007 114222120 -88863412 + AluY SINE Alu 1 113 -198 5212 142 159 68 chr5 114222132 114223535 -88861997 - pTR5 LTR ERV1 -143 2295 765 1581 61 0 24 chr5 114223535 114223748 -88861784 + AluY SINE Alu 91 298 -13 1909 160 49 15 chr5 114223751 114224158 -88861374 + L1MA3 LINE L1 3032 3452 -4113 1263 184 53 4 chr5 114224170 114224414 -88861118 - AluJb SINE Alu -27 285 30 759 191 21 34 chr5 114224425 114224643 -88860889 + L1MA3 LINE L1 3439 3653 -3912 * 7670 161 35 6 chr5 114224641 114226989 -88858543 + L1MA3 LINE L1 5308 7724 0 235 302 170 45 chr5 114227934 114228199 -88857333 + L1MC/D LINE L1 5314 5611 -2197 1214 288 38 11 chr5 114228213 114228657 -88856875 + L1ME3A LINE L1 5415 5870 -300 1104 222 68 19 chr5 114229106 114229430 -88856102 - Charlie4a DNA MER1_type -1 507 168 291 347 85 6 chr5 114229448 114229624 -88855908 + L2 LINE L2 2660 2849 -465 211 211 0 0 chr5 114230050 114230088 -88855444 + (CATA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr5 114230478 114230501 -88855031 + AT_rich Low_complexity Low_complexity 1 23 0 2298 81 7 0 chr5 114230655 114230951 -88854581 - AluSg SINE Alu -12 298 1 22 0 0 0 chr5 114231138 114231160 -88854372 + AT_rich Low_complexity Low_complexity 1 22 0 1691 168 10 3 chr5 114231449 114231741 -88853791 + AluSx SINE Alu 3 296 -16 234 0 0 0 chr5 114231800 114231826 -88853706 + (T)n Simple_repeat Simple_repeat 1 26 0 470 120 40 0 chr5 114232981 114233056 -88852476 - MER46A DNA MER2_type -2 234 157 234 286 14 14 chr5 114233016 114233086 -88852446 + MER46A DNA MER2_type 99 168 -68 * 27 29 0 0 chr5 114235757 114235791 -88849741 + AT_rich Low_complexity Low_complexity 1 34 0 2136 114 10 7 chr5 114236373 114236680 -88848852 - AluSx SINE Alu 0 312 5 659 275 35 8 chr5 114237606 114237831 -88847701 + L1ME LINE L1 5497 5728 -393 1198 49 7 0 chr5 114238455 114238598 -88846934 + AluSq/x SINE Alu 1 144 -168 497 105 0 0 chr5 114238604 114238680 -88846852 + Alu SINE Alu 227 302 -10 21 36 0 0 chr5 114239533 114239561 -88845971 + AT_rich Low_complexity Low_complexity 1 28 0 1616 174 3 30 chr5 114239598 114239897 -88845635 + AluJb SINE Alu 1 291 -21 1075 258 93 114 chr5 114240300 114240611 -88844921 - L1ME3A LINE L1 -5 6165 5849 4097 142 26 11 chr5 114240611 114241337 -88844195 - L1MA8 LINE L1 -6 6285 5549 1075 258 93 114 chr5 114241337 114241483 -88844049 - L1ME3A LINE L1 -321 5849 5702 812 172 108 64 chr5 114241483 114241686 -88843846 - MER58C DNA MER1_type -3 212 1 1075 258 93 114 chr5 114241686 114241916 -88843616 - L1ME3A LINE L1 -468 5702 5469 7386 32 23 0 chr5 114241916 114242968 -88842564 - L1PA5 LINE L1 -1 6153 5098 1075 258 93 114 chr5 114242968 114243309 -88842223 - L1ME3A LINE L1 -701 5469 5174 2029 154 0 0 chr5 114243309 114243621 -88841911 - AluJo SINE Alu 0 312 1 1075 258 93 114 chr5 114243621 114243999 -88841533 - L1ME3A LINE L1 -996 5174 4790 980 256 214 31 chr5 114244063 114245056 -88840476 - L1ME3A LINE L1 -1481 4665 3491 24 0 0 0 chr5 114245099 114245123 -88840409 + AT_rich Low_complexity Low_complexity 1 24 0 352 273 84 17 chr5 114245139 114245377 -88840155 - L1ME3A LINE L1 -2809 3337 3084 546 257 148 5 chr5 114245873 114246075 -88839457 + MIR SINE MIR 6 236 -26 717 218 26 26 chr5 114246215 114246371 -88839161 - Tigger2 DNA MER2_type 0 2718 2563 8542 118 14 4 chr5 114246372 114247632 -88837900 + HSMAR2 DNA Mariner 28 1299 -3 354 111 111 0 chr5 114247635 114247707 -88837825 - Tigger2 DNA MER2_type -153 2565 2486 1355 123 58 8 chr5 114247709 114247952 -88837580 - Tigger2 DNA MER2_type -194 2524 2270 357 191 0 0 chr5 114247944 114248007 -88837525 - Tigger2 DNA MER2_type -2655 63 1 * 1720 115 58 10 chr5 114249464 114249759 -88835773 - L1MC1 LINE L1 0 6333 6025 25 31 0 0 chr5 114251178 114251210 -88834322 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 114252254 114252282 -88833250 + AT_rich Low_complexity Low_complexity 1 28 0 493 256 118 86 chr5 114252568 114252950 -88832582 - L1ME4a LINE L1 -4 6117 5724 290 257 1 0 chr5 114252999 114253075 -88832457 - L1ME4a LINE L1 -552 5569 5494 21 0 0 0 chr5 114253077 114253098 -88832434 + AT_rich Low_complexity Low_complexity 1 21 0 213 297 14 14 chr5 114253418 114253492 -88832040 + CT-rich Low_complexity Low_complexity 2 75 0 205 304 0 0 chr5 114255058 114255104 -88830428 - L2 LINE L2 -27 3245 3200 1762 275 77 7 chr5 114255287 114255836 -88829696 - MLT1G1 LTR MaLR -8 587 1 414 310 230 0 chr5 114256567 114256741 -88828791 - L2 LINE L2 -536 2778 2565 251 241 0 0 chr5 114257760 114257818 -88827714 + MIR3 SINE MIR 150 207 -1 1333 153 31 9 chr5 114258182 114258411 -88827121 - MER46A DNA MER2_type -1 235 2 894 284 35 9 chr5 114259367 114259715 -88825817 - L1ME4a LINE L1 -1312 4834 4478 305 104 0 0 chr5 114259728 114259776 -88825756 - MADE1 DNA Mariner -27 53 6 354 269 11 115 chr5 114259783 114260043 -88825489 - L1ME4a LINE L1 -1701 4445 4213 234 224 204 79 chr5 114260050 114260202 -88825330 - L1ME4a LINE L1 -2027 4119 3949 * 331 268 54 10 chr5 114260199 114260359 -88825173 - L1ME3A LINE L1 -256 5906 5742 340 323 108 0 chr5 114260371 114260501 -88825031 + L2 LINE L2 3129 3272 0 30 59 0 0 chr5 114261249 114261300 -88824232 + AT_rich Low_complexity Low_complexity 1 51 0 2296 84 7 3 chr5 114261524 114261822 -88823710 + AluY SINE Alu 1 299 -12 21 0 0 0 chr5 114261943 114261964 -88823568 + AT_rich Low_complexity Low_complexity 1 21 0 2099 97 0 14 chr5 114262242 114262552 -88822980 + AluSx SINE Alu 1 306 0 333 0 0 0 chr5 114264133 114264170 -88821362 + (T)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 114264641 114264662 -88820870 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 114268378 114268399 -88817133 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 114268634 114268670 -88816862 + AT_rich Low_complexity Low_complexity 1 36 0 24 85 0 0 chr5 114269742 114269801 -88815731 + AT_rich Low_complexity Low_complexity 1 59 0 198 0 0 0 chr5 114270554 114270576 -88814956 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 414 185 148 30 chr5 114272459 114272594 -88812938 - MER103 DNA DNA -3 163 13 198 296 23 0 chr5 114274094 114274138 -88811394 - MIR SINE MIR -124 84 40 1337 176 59 0 chr5 114275124 114275363 -88810169 - AluJo SINE Alu -12 300 48 233 201 21 28 chr5 114275441 114275507 -88810025 + AluJ/monomer SINE Alu 1 36 -264 710 188 0 43 chr5 114276295 114276433 -88809099 + FLAM_A SINE Alu 1 132 -1 731 254 86 17 chr5 114276812 114277044 -88808488 + MIR SINE MIR 15 262 0 521 279 98 11 chr5 114277447 114277630 -88807902 - MIR SINE MIR -44 218 20 260 288 62 12 chr5 114277684 114277764 -88807768 - L1MEc LINE L1 -2282 3933 3850 249 292 56 42 chr5 114277846 114277990 -88807542 - L2 LINE L2 -1199 2115 1970 691 172 61 71 chr5 114278037 114278235 -88807297 - L1MEc LINE L1 -2406 3809 3614 1588 218 112 85 chr5 114278270 114278526 -88807006 - L1MEc LINE L1 -2701 3514 3266 2380 84 0 7 chr5 114278526 114278834 -88806698 - AluSx SINE Alu -6 306 1 1588 218 112 85 chr5 114278834 114279662 -88805870 - L1MEc LINE L1 -2949 3266 2401 2112 283 41 19 chr5 114279686 114280587 -88804945 - L1MEc LINE L1 -4089 2307 1387 1920 236 123 47 chr5 114280656 114281509 -88804023 - L1MEc LINE L1 -5127 1078 161 1710 184 0 7 chr5 114281571 114281894 -88803638 - AluJb SINE Alu 0 321 1 538 307 43 31 chr5 114282008 114282262 -88803270 - L2 LINE L2 -906 2408 2152 21 71 0 0 chr5 114283225 114283267 -88802265 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 114284262 114284284 -88801248 + AT_rich Low_complexity Low_complexity 1 22 0 981 190 0 0 chr5 114285407 114285565 -88799967 - FRAM SINE Alu -19 157 1 5508 35 39 4 chr5 114285816 114286508 -88799024 - L1PA6 LINE L1 -3 6151 5436 303 284 85 39 chr5 114286610 114286973 -88798559 - L1M4 LINE L1 -3625 2521 2142 302 281 27 19 chr5 114287037 114287154 -88798378 - MLT1L LTR MaLR -13 602 459 402 281 0 0 chr5 114287483 114287572 -88797960 - MER20 DNA MER1_type -11 208 120 2168 227 63 39 chr5 114287577 114288216 -88797316 - MER76 LTR ERV -34 654 1 512 212 53 9 chr5 114288216 114288324 -88797208 - MER20 DNA MER1_type -106 113 1 26 50 0 0 chr5 114288510 114288550 -88796982 + AT_rich Low_complexity Low_complexity 1 40 0 203 171 0 0 chr5 114288962 114289003 -88796529 + T-rich Low_complexity Low_complexity 1 41 0 2318 100 7 0 chr5 114289035 114289344 -88796188 - AluSq SINE Alu -2 311 1 22 35 0 0 chr5 114290355 114290384 -88795148 + AT_rich Low_complexity Low_complexity 1 29 0 207 100 0 0 chr5 114290695 114290725 -88794807 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 291 203 0 76 chr5 114291409 114291488 -88794044 + MIR3 SINE MIR 4 76 -132 283 345 109 0 chr5 114292638 114292757 -88792775 - L2 LINE L2 -3 3310 3179 23 0 0 0 chr5 114293924 114293947 -88791585 + AT_rich Low_complexity Low_complexity 1 23 0 427 103 0 0 chr5 114293979 114294047 -88791485 + L1PA15 LINE L1 6095 6162 -3 639 240 145 13 chr5 114294313 114294617 -88790915 - HAL1 LINE L1 -139 2368 2025 5769 102 36 7 chr5 114295153 114296187 -88789345 + L1PA15 LINE L1 5104 6164 -1 2130 116 0 25 chr5 114296419 114296739 -88788793 - AluSx SINE Alu 0 312 1 21 71 0 0 chr5 114296819 114296861 -88788671 + AT_rich Low_complexity Low_complexity 1 42 0 399 299 72 60 chr5 114297361 114297679 -88787853 - HAL1 LINE L1 -2185 322 1 222 347 74 50 chr5 114297876 114297997 -88787535 + MIR SINE MIR 1 124 -138 2062 129 3 0 chr5 114298876 114299170 -88786362 + AluSx SINE Alu 1 295 -17 220 319 91 42 chr5 114299221 114299411 -88786121 - MIR SINE MIR -38 224 19 1798 91 0 28 chr5 114299670 114299924 -88785608 + AluY SINE Alu 40 286 -25 6919 52 7 13 chr5 114299939 114301156 -88784376 - L1PA7 LINE L1 -21 6133 4924 256 289 54 80 chr5 114301168 114301272 -88784260 + MIR SINE MIR 4 109 -153 2202 51 3 70 chr5 114301272 114301585 -88783947 - AluY SINE Alu -19 292 1 256 289 54 80 chr5 114301585 114301659 -88783873 + MIR SINE MIR 109 174 -88 246 32 0 0 chr5 114301659 114301690 -88783842 + (TG)n Simple_repeat Simple_repeat 1 31 0 256 289 54 80 chr5 114301690 114301747 -88783785 + MIR SINE MIR 174 231 -31 21 36 0 0 chr5 114302731 114302759 -88782773 + AT_rich Low_complexity Low_complexity 1 28 0 259 262 65 0 chr5 114303353 114303460 -88782072 + MER103 DNA DNA 31 144 -22 487 206 110 58 chr5 114303574 114303729 -88781803 + MIR SINE MIR 29 191 -71 3486 205 14 31 chr5 114304224 114304620 -88780912 + L1PA16 LINE L1 9 388 -6461 2177 112 0 0 chr5 114304620 114304924 -88780608 - AluSq SINE Alu -9 304 1 3486 205 14 31 chr5 114304924 114305265 -88780267 + L1PA16 LINE L1 388 733 -6116 320 220 20 30 chr5 114305779 114305879 -88779653 + L1PA16 LINE L1 1432 1530 -5320 2568 146 21 9 chr5 114305890 114306261 -88779271 + MER57B LTR ERV1 1 379 -55 207 0 0 0 chr5 114306261 114306284 -88779248 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2568 146 21 9 chr5 114306284 114306331 -88779201 + MER57B LTR ERV1 379 424 -10 3529 218 34 27 chr5 114306377 114307646 -88777886 + L1PA16 LINE L1 1668 2927 -3942 750 169 0 29 chr5 114307646 114307782 -88777750 + FLAM_C SINE Alu 2 133 0 3529 218 34 27 chr5 114307782 114311534 -88773998 + L1PA16 LINE L1 2927 6869 0 2184 109 27 35 chr5 114311774 114312149 -88773383 - THE1C LTR MaLR 0 375 4 880 217 115 84 chr5 114312233 114312615 -88772917 - MSTD LTR MaLR -2 394 1 2012 173 18 18 chr5 114312695 114313083 -88772449 + MLT1B LTR MaLR 3 390 0 353 167 103 0 chr5 114313403 114313481 -88772051 + MIR SINE MIR 131 216 -46 224 337 35 0 chr5 114313778 114313864 -88771668 + MIR SINE MIR 53 141 -121 387 262 25 25 chr5 114313868 114313990 -88771542 - L2 LINE L2 -3 3310 3189 226 254 18 0 chr5 114315661 114315716 -88769816 + L2 LINE L2 3258 3313 0 242 237 161 25 chr5 114315982 114316100 -88769432 - MER103 DNA DNA -18 148 15 737 244 129 14 chr5 114316533 114316742 -88768790 - MIR SINE MIR -7 255 23 291 247 89 38 chr5 114317187 114317345 -88768187 - L1ME4a LINE L1 -13 6108 5943 23 105 0 0 chr5 114317793 114317879 -88767653 + AT_rich Low_complexity Low_complexity 1 86 0 191 192 13 0 chr5 114317883 114317961 -88767571 + (TA)n Simple_repeat Simple_repeat 2 80 0 24 32 0 0 chr5 114317961 114317992 -88767540 + AT_rich Low_complexity Low_complexity 1 31 0 279 136 81 6 chr5 114317994 114318238 -88767294 + (TA)n Simple_repeat Simple_repeat 1 262 0 336 263 23 88 chr5 114318281 114318402 -88767130 - L1MC4 LINE L1 -2 8040 7913 189 0 0 0 chr5 114318402 114318423 -88767109 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 432 37 0 0 chr5 114318422 114318476 -88767056 + (CA)n Simple_repeat Simple_repeat 1 54 0 336 263 23 88 chr5 114318423 114318525 -88767007 - L1MC4 LINE L1 -129 7913 7881 720 264 115 40 chr5 114318533 114318829 -88766703 + L1MC4 LINE L1 7207 7524 -518 6176 239 46 14 chr5 114318860 114320857 -88764675 + L1ME1 LINE L1 2592 4651 -1495 2631 240 87 34 chr5 114320850 114321839 -88763693 + L1ME1 LINE L1 5129 6161 -5 * 249 83 0 0 chr5 114322164 114322200 -88763332 + (TC)n Simple_repeat Simple_repeat 2 37 0 1895 142 42 27 chr5 114322224 114322556 -88762976 + MER1B DNA MER1_type 1 337 0 2518 156 53 2 chr5 114322996 114323431 -88762101 + MSTB2 LTR MaLR 1 457 0 2003 116 3 3 chr5 114323558 114323843 -88761689 - AluSq SINE Alu -6 307 23 243 125 0 0 chr5 114324348 114324388 -88761144 + (CAT)n Simple_repeat Simple_repeat 2 41 0 272 70 23 0 chr5 114324423 114324466 -88761066 + (CA)n Simple_repeat Simple_repeat 1 44 0 188 114 29 29 chr5 114324628 114324663 -88760869 - MIR SINE MIR -9 253 219 264 209 0 0 chr5 114324998 114325084 -88760448 + CT-rich Low_complexity Low_complexity 1 86 0 387 89 0 0 chr5 114325098 114325154 -88760378 + (CA)n Simple_repeat Simple_repeat 2 57 0 214 292 229 0 chr5 114327657 114327753 -88757779 - MIR SINE MIR -122 140 23 25 0 0 0 chr5 114328132 114328157 -88757375 + AT_rich Low_complexity Low_complexity 1 25 0 4375 156 12 6 chr5 114328282 114329196 -88756336 - L1PA15 LINE L1 -723 5442 4527 4485 142 16 1 chr5 114329196 114329902 -88755630 + L1PA15 LINE L1 5442 6162 -3 4515 184 28 59 chr5 114330126 114331219 -88754313 - L1MD1 LINE L1 -1 6241 5216 1518 199 3 33 chr5 114331219 114331526 -88754006 - AluJo SINE Alu -14 298 1 4515 184 28 59 chr5 114331526 114332086 -88753446 - L1MD1 LINE L1 -1026 5216 4640 3422 202 62 49 chr5 114332103 114332238 -88753294 - L1MD1 LINE L1 -1606 4540 4408 1361 201 108 0 chr5 114332238 114332507 -88753025 - AluJo SINE Alu -14 298 1 3422 202 62 49 chr5 114332507 114333426 -88752106 - L1MD1 LINE L1 -1738 4408 3473 396 109 94 0 chr5 114333429 114333493 -88752039 - L1MDa LINE L1 -6457 83 14 505 294 104 0 chr5 114333544 114333765 -88751767 - L1MC4a LINE L1 -1894 5914 5671 342 0 0 0 chr5 114334132 114334170 -88751362 + (TG)n Simple_repeat Simple_repeat 2 39 0 254 359 61 8 chr5 114334519 114334650 -88750882 + L2 LINE L2 3116 3253 -19 257 333 24 24 chr5 114335135 114335219 -88750313 - MIR3 SINE MIR -38 170 87 186 261 185 43 chr5 114335227 114335319 -88750213 - L2 LINE L2 -20 3293 3189 545 170 87 147 chr5 114335576 114335794 -88749738 + MER63A DNA MER1_type 2 206 -4 461 336 189 7 chr5 114335837 114336117 -88749415 - L2 LINE L2 -15 3257 2927 238 377 19 19 chr5 114336175 114336334 -88749198 + L2 LINE L2 2249 2407 -907 610 276 138 42 chr5 114337034 114337484 -88748048 + LTR33A LTR ERVL 29 523 0 213 208 13 78 chr5 114338949 114339026 -88746506 + MIR SINE MIR 118 189 -73 228 86 0 0 chr5 114339639 114339674 -88745858 + (GGA)n Simple_repeat Simple_repeat 1 35 0 335 302 107 78 chr5 114339997 114340586 -88744946 - L1M2 LINE L1 -5580 1269 664 318 26 0 0 chr5 114341006 114341045 -88744487 + (TG)n Simple_repeat Simple_repeat 1 39 0 830 37 0 9 chr5 114342586 114342693 -88742839 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 217 238 48 16 chr5 114343166 114343229 -88742303 + L2 LINE L2 3249 3313 0 359 125 0 18 chr5 114343371 114343427 -88742105 + MER94 DNA DNA 25 79 -55 477 62 0 0 chr5 114344155 114344220 -88741312 + (TCC)n Simple_repeat Simple_repeat 1 65 0 229 298 136 35 chr5 114345136 114345364 -88740168 + MIR SINE MIR 10 260 -2 192 277 47 74 chr5 114346324 114346472 -88739060 - MIR SINE MIR -50 212 69 294 269 0 11 chr5 114348041 114348094 -88737438 + (TA)n Simple_repeat Simple_repeat 2 55 -38 1875 171 24 9 chr5 114348094 114348433 -88737099 + MER2 DNA MER2_type 1 344 0 294 269 0 11 chr5 114348433 114348472 -88737060 + (TA)n Simple_repeat Simple_repeat 55 93 0 396 273 11 0 chr5 114348483 114348571 -88736961 + L3 LINE CR1 1391 1479 -98 1213 236 72 2 chr5 114348694 114349237 -88736295 - L1ME1 LINE L1 -29 6137 5556 739 246 30 6 chr5 114349542 114349709 -88735823 + MER5B DNA MER1_type 6 176 -2 266 286 95 9 chr5 114349722 114349827 -88735705 + MIR SINE MIR 25 138 -70 1449 170 67 22 chr5 114349893 114350192 -88735340 + AluJo SINE Alu 1 311 0 24 32 0 0 chr5 114350456 114350487 -88735045 + AT_rich Low_complexity Low_complexity 1 31 0 229 217 72 0 chr5 114351210 114351279 -88734253 + L1ME LINE L1 5592 5665 -456 55 16 0 0 chr5 114355297 114355359 -88730173 + AT_rich Low_complexity Low_complexity 1 62 0 23 54 0 0 chr5 114357969 114358006 -88727526 + AT_rich Low_complexity Low_complexity 1 37 0 2248 123 0 0 chr5 114361162 114361472 -88724060 - AluSx SINE Alu -2 310 1 473 285 61 12 chr5 114362006 114362171 -88723361 - MER117 DNA MER1_type -2 195 23 2419 70 0 3 chr5 114363527 114363827 -88721705 - AluY SINE Alu -12 299 1 210 255 11 96 chr5 114364209 114364303 -88721229 - L2 LINE L2 0 3313 3228 773 179 0 0 chr5 114365415 114365538 -88719994 - FLAM_A SINE Alu -10 123 1 189 331 130 18 chr5 114365576 114365745 -88719787 + MIR SINE MIR 61 248 -14 236 202 45 67 chr5 114365961 114366050 -88719482 + Charlie7 DNA MER1_type 18 104 -2508 226 250 112 0 chr5 114366040 114366156 -88719376 + Charlie7 DNA MER1_type 2441 2569 -43 * 739 128 8 26 chr5 114366255 114366372 -88719160 - FRAM SINE Alu -17 159 45 337 39 39 0 chr5 114367027 114367078 -88718454 + (CTATA)n Simple_repeat Simple_repeat 1 53 0 270 0 0 0 chr5 114368044 114368074 -88717458 + (CA)n Simple_repeat Simple_repeat 1 30 0 24 32 0 0 chr5 114369097 114369128 -88716404 + AT_rich Low_complexity Low_complexity 1 31 0 223 245 3 153 chr5 114369716 114369824 -88715708 + MIR SINE MIR 4 97 -111 185 0 40 0 chr5 114369843 114369868 -88715664 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 28 48 0 0 chr5 114370451 114370493 -88715039 + AT_rich Low_complexity Low_complexity 1 42 0 2577 46 3 0 chr5 114373316 114373623 -88711909 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 114373795 114373818 -88711714 + AT_rich Low_complexity Low_complexity 1 23 0 824 284 68 15 chr5 114374699 114374963 -88710569 + L2 LINE L2 3036 3313 0 230 239 0 0 chr5 114374985 114375031 -88710501 - L2 LINE L2 -2 3311 3266 670 232 160 6 chr5 114375381 114375562 -88709970 + MIR SINE MIR 35 243 -19 334 286 116 42 chr5 114376113 114376354 -88709178 + MIR SINE MIR 3 261 -1 490 241 91 109 chr5 114376767 114377087 -88708445 + MER102b DNA MER1_type 3 316 -25 510 250 121 44 chr5 114377522 114377794 -88707738 - MER102a DNA MER1_type 0 330 38 312 312 105 19 chr5 114377879 114378077 -88707455 + MIR SINE MIR 15 226 -36 209 209 23 0 chr5 114378977 114379020 -88706512 + CT-rich Low_complexity Low_complexity 1 44 0 24 53 0 0 chr5 114379190 114379228 -88706304 + AT_rich Low_complexity Low_complexity 1 38 0 2832 220 27 46 chr5 114380835 114381625 -88703907 - L1MC3 LINE L1 -170 7615 6841 1759 168 54 26 chr5 114381625 114381977 -88703555 - MLT1A2 LTR MaLR -12 362 1 899 173 209 0 chr5 114381977 114382168 -88703364 + MLT1B LTR MaLR 134 364 -26 306 0 0 0 chr5 114382187 114382221 -88703311 + (CA)n Simple_repeat Simple_repeat 1 34 0 296 323 20 0 chr5 114382378 114382477 -88703055 - L2 LINE L2 -248 3065 2965 953 127 0 14 chr5 114382801 114382943 -88702589 - FRAM SINE Alu -17 159 20 585 121 0 0 chr5 114382947 114383030 -88702502 - AluJ/FLAM SINE Alu -229 83 1 1539 237 61 18 chr5 114383373 114383667 -88701865 - MLT1F LTR MaLR -129 413 96 2039 204 56 14 chr5 114383667 114384152 -88701380 + MLT1D LTR MaLR 1 505 0 1539 237 61 18 chr5 114384152 114384253 -88701279 - MLT1F LTR MaLR -446 96 1 276 229 82 0 chr5 114385189 114385250 -88700282 - MIR3 SINE MIR -31 177 112 884 326 107 15 chr5 114385415 114385894 -88699638 - MLT1K LTR MaLR -36 552 30 1382 179 117 61 chr5 114386012 114386387 -88699145 - MSTD LTR MaLR 0 396 1 574 239 19 34 chr5 114386497 114386706 -88698826 + L1MC5 LINE L1 7706 7911 -50 2374 167 0 0 chr5 114387284 114387656 -88697876 + MER47B DNA MER2_type 4 375 -43 1799 155 0 0 chr5 114387671 114387935 -88697597 - AluJb SINE Alu -48 264 1 317 263 53 35 chr5 114388097 114388211 -88697321 - L2 LINE L2 -219 3053 2938 328 269 69 31 chr5 114389165 114389295 -88696237 - MER91A DNA MER1_type -42 154 20 222 330 75 32 chr5 114389832 114389926 -88695606 - L2 LINE L2 -38 3234 3137 15466 30 2 1 chr5 114390061 114392677 -88692855 - L1PA4 LINE L1 -2 6153 3534 472 335 33 7 chr5 114392866 114393018 -88692514 - MIR SINE MIR -87 175 20 360 292 104 13 chr5 114393439 114393593 -88691939 + MIR SINE MIR 12 179 -83 410 0 20 0 chr5 114394593 114394643 -88690889 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 740 273 95 19 chr5 114394948 114395370 -88690162 + L1ME4a LINE L1 5595 6048 -73 805 330 77 52 chr5 114395386 114396695 -88688837 - L2 LINE L2 0 3313 1853 23 0 0 0 chr5 114396748 114396771 -88688761 + AT_rich Low_complexity Low_complexity 1 23 0 309 51 0 0 chr5 114396799 114396838 -88688694 + (TG)n Simple_repeat Simple_repeat 1 39 0 306 221 78 0 chr5 114397546 114397623 -88687909 - MIR3 SINE MIR -28 180 98 24 32 0 0 chr5 114397692 114397723 -88687809 + AT_rich Low_complexity Low_complexity 1 31 0 286 263 25 0 chr5 114397877 114397957 -88687575 - MER103 DNA DNA -26 140 59 3969 158 64 23 chr5 114398613 114399347 -88686185 - L1MB7 LINE L1 -31 6153 5451 2176 116 0 0 chr5 114399347 114399666 -88685866 - AluSx SINE Alu 0 319 1 3969 158 64 23 chr5 114399666 114399694 -88685838 - L1MB7 LINE L1 -733 5451 5426 1988 122 83 3 chr5 114399694 114400031 -88685501 + THE1B LTR MaLR 1 364 0 3969 158 64 23 chr5 114400031 114400201 -88685331 - L1MB7 LINE L1 -758 5426 5172 350 297 119 0 chr5 114400830 114400948 -88684584 - MIR SINE MIR -61 201 70 335 242 134 26 chr5 114401173 114401335 -88684197 - MIR SINE MIR -47 215 36 2540 54 0 16 chr5 114401847 114402163 -88683369 - AluY SINE Alu 0 311 1 2277 112 0 0 chr5 114402632 114402928 -88682604 + AluSg SINE Alu 1 296 -14 2139 168 18 69 chr5 114403623 114404070 -88681462 - MSTB LTR MaLR -2 424 1 194 333 96 23 chr5 114404433 114404610 -88680922 + L2 LINE L2 2517 2706 -608 2289 110 0 0 chr5 114404864 114405163 -88680369 - AluSx SINE Alu -13 299 1 188 261 77 0 chr5 114405394 114405459 -88680073 + L2 LINE L2 3238 3307 -6 678 283 108 29 chr5 114405936 114406176 -88679356 + MIR SINE MIR 4 262 0 312 48 0 0 chr5 114408335 114408377 -88677155 + (TG)n Simple_repeat Simple_repeat 2 43 0 1267 198 149 21 chr5 114408418 114408747 -88676785 + MLT1A2 LTR MaLR 1 371 -3 203 217 36 12 chr5 114408777 114408860 -88676672 + (TG)n Simple_repeat Simple_repeat 1 85 0 222 37 0 0 chr5 114408886 114408913 -88676619 + (TG)n Simple_repeat Simple_repeat 1 27 0 208 311 0 22 chr5 114409226 114409316 -88676216 + GA-rich Low_complexity Low_complexity 1 88 0 487 223 24 95 chr5 114409955 114410166 -88675366 - MER102a DNA MER1_type 0 330 135 1774 159 25 61 chr5 114410312 114410707 -88674825 - MLT1B LTR MaLR -7 383 3 3819 174 24 4 chr5 114411400 114412299 -88673233 + L1MA9 LINE L1 5277 6289 -23 622 96 11 0 chr5 114413902 114413996 -88671536 + L1MB2 LINE L1 6070 6164 -7 200 337 97 102 chr5 114414489 114414922 -88670610 - L2 LINE L2 -337 2977 2547 243 81 0 0 chr5 114415000 114415037 -88670495 + L1ME3 LINE L1 6109 6145 -17 310 235 43 17 chr5 114415160 114415275 -88670257 + L1MC4 LINE L1 7924 8041 -1 306 315 156 55 chr5 114415829 114416083 -88669449 - L2 LINE L2 -1006 2308 2081 651 48 0 0 chr5 114416083 114416166 -88669366 + (GA)n Simple_repeat Simple_repeat 2 84 0 306 315 156 55 chr5 114416166 114416854 -88668678 - L2 LINE L2 -1233 2081 1271 187 237 186 42 chr5 114418010 114418128 -88667404 - L2 LINE L2 -6 3307 3173 1303 197 36 65 chr5 114419286 114419671 -88665861 + MLT1A2 LTR MaLR 1 374 0 320 342 89 19 chr5 114419682 114419840 -88665692 + MIR3 SINE MIR 34 202 -6 308 345 14 35 chr5 114419869 114420011 -88665521 - MIR3 SINE MIR -10 198 60 2326 110 0 0 chr5 114420646 114420956 -88664576 - AluSx SINE Alu -2 310 1 377 283 31 88 chr5 114420968 114421194 -88664338 - HAL1b LINE L1 -442 906 694 23 0 0 0 chr5 114421395 114421418 -88664114 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 114421795 114421816 -88663716 + AT_rich Low_complexity Low_complexity 1 21 0 647 245 56 61 chr5 114422462 114422658 -88662874 - MIR SINE MIR -11 251 57 9414 212 30 13 chr5 114422677 114425934 -88659598 - L1MC1 LINE L1 -395 6218 2911 963 165 10 24 chr5 114425940 114426146 -88659386 - L1MC1 LINE L1 -4794 1632 1430 871 249 76 38 chr5 114426146 114426488 -88659044 + MLT1A2 LTR MaLR 1 355 -19 6386 172 71 3 chr5 114426502 114427829 -88657703 - L1MC1 LINE L1 -4991 1435 19 261 306 64 19 chr5 114427905 114428062 -88657470 - LTR16C LTR ERVL 0 491 328 406 298 40 30 chr5 114428279 114428477 -88657055 - LTR16C LTR ERVL 0 491 292 716 272 94 49 chr5 114429315 114429720 -88655812 + MLT1H LTR MaLR 124 546 -3 225 198 45 90 chr5 114430525 114430636 -88654896 + Charlie8 DNA MER1_type 51 156 -2261 2053 68 7 0 chr5 114431164 114431442 -88654090 - L1PA13 LINE L1 -209 5959 5680 1390 94 0 10 chr5 114431442 114431636 -88653896 + L1PA13 LINE L1 5950 6149 -14 1133 84 0 19 chr5 114432546 114432701 -88652831 + AluSg/x SINE Alu 150 301 -11 341 273 20 0 chr5 114432709 114432808 -88652724 + Charlie8 DNA MER1_type 106 206 -2211 232 280 147 0 chr5 114432814 114432889 -88652643 - MIR SINE MIR -93 115 30 331 264 221 0 chr5 114433162 114433302 -88652230 + MER5B DNA MER1_type 3 173 -5 2293 225 62 46 chr5 114433689 114434538 -88650994 - L1ME3 LINE L1 -4 6158 5296 1133 216 31 3 chr5 114434557 114434844 -88650688 - L1MB8 LINE L1 -26 6152 5858 3028 43 10 0 chr5 114436290 114436688 -88648844 - L1P LINE L1 -1196 4950 4549 6306 48 3 16 chr5 114436688 114437579 -88647953 + L1P LINE L1 3450 4329 -1817 1920 207 57 35 chr5 114437690 114438315 -88647217 - L1ME2 LINE L1 -323 5841 5194 358 60 0 0 chr5 114438315 114438365 -88647167 - L1PA6 LINE L1 0 6154 6105 1419 156 22 0 chr5 114438366 114438641 -88646891 - L1P3 LINE L1 -568 5586 5306 1959 139 7 3 chr5 114439234 114439522 -88646010 + AluSx SINE Alu 1 289 -23 1356 194 89 24 chr5 114439668 114440040 -88645492 + L1MA9 LINE L1 5878 6273 -39 21 71 0 0 chr5 114440150 114440192 -88645340 + AT_rich Low_complexity Low_complexity 1 42 0 1722 260 105 33 chr5 114440497 114441312 -88644220 - HAL1 LINE L1 -713 1794 910 1572 125 31 21 chr5 114441312 114441600 -88643932 - L1MD2 LINE L1 -2 6357 6067 1722 260 105 33 chr5 114441600 114441657 -88643875 - HAL1 LINE L1 -1597 910 859 713 318 184 24 chr5 114442088 114442554 -88642978 + L2 LINE L2 2314 2854 -460 1319 108 6 0 chr5 114442586 114442762 -88642770 - AluSq SINE Alu -136 177 1 333 343 67 11 chr5 114442846 114443024 -88642508 + L2 LINE L2 3126 3313 0 505 261 62 58 chr5 114443799 114444224 -88641308 - MLT1J LTR MaLR -17 494 1 1276 167 0 53 chr5 114444294 114444539 -88640993 - MER46A DNA MER2_type 0 236 5 1049 86 11 23 chr5 114445080 114445254 -88640278 - L1P3 LINE L1 -5866 595 424 449 221 123 70 chr5 114447865 114448222 -88637310 - HAL1 LINE L1 -155 2352 1977 3278 102 54 25 chr5 114448346 114448935 -88636597 + L1P3 LINE L1 962 1567 -4894 * 5739 57 15 1 chr5 114448931 114449739 -88635793 + L1P LINE L1 4508 5326 -820 10149 89 21 29 chr5 114449910 114451498 -88634034 - THE1B-int LTR MaLR -5 1575 1 1380 124 33 40 chr5 114451500 114451774 -88633758 - THE1B LTR MaLR -2 362 91 3742 134 50 76 chr5 114453475 114454335 -88631197 + L1PA16 LINE L1 5329 6166 0 185 260 169 0 chr5 114454996 114455073 -88630459 - MIR3 SINE MIR -11 197 108 1679 268 171 28 chr5 114455680 114457170 -88628362 - HAL1 LINE L1 -623 1884 155 1758 94 72 83 chr5 114457186 114457547 -88627985 - THE1B LTR MaLR 0 364 8 1691 228 96 110 chr5 114457692 114457787 -88627745 + MLT-int LTR MaLR 332 427 -1308 2298 94 10 3 chr5 114457787 114458086 -88627446 - AluSx SINE Alu -11 301 1 1691 228 96 110 chr5 114458086 114458774 -88626758 + MLT-int LTR MaLR 427 1104 -631 410 0 20 0 chr5 114458990 114459040 -88626492 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 322 297 137 6 chr5 114460066 114460248 -88625284 - MIR SINE MIR -45 217 12 1944 193 60 28 chr5 114460663 114461130 -88624402 - MER82 DNA MER2_type -170 483 2 936 55 78 0 chr5 114462056 114462184 -88623348 + MER85 DNA T2_type 1 138 -1 4560 198 30 48 chr5 114463228 114465033 -88620499 - L1MB7 LINE L1 -352 5832 4060 225 253 123 65 chr5 114465587 114465741 -88619791 - L2 LINE L2 -122 3191 3029 491 363 26 18 chr5 114466030 114466256 -88619276 - MIR SINE MIR 0 262 35 355 274 90 16 chr5 114468377 114468432 -88617100 - L1MEc LINE L1 -967 1523 1473 919 260 0 13 chr5 114468432 114468659 -88616873 + MER58A DNA MER1_type 1 224 0 355 274 90 16 chr5 114468659 114468788 -88616744 - L1MEc LINE L1 -1017 1473 1267 384 236 90 17 chr5 114468790 114468968 -88616564 - L1MEc LINE L1 -4926 1193 1003 * 755 153 91 55 chr5 114468960 114469235 -88616297 - L1 LINE L1 -2656 3490 3206 21 0 0 0 chr5 114469714 114469735 -88615797 + AT_rich Low_complexity Low_complexity 1 21 0 1131 229 143 28 chr5 114470133 114470491 -88615041 - MLT1H1 LTR MaLR -156 399 1 1699 164 0 43 chr5 114470597 114470896 -88614636 - AluJb SINE Alu -26 286 1 22 0 0 0 chr5 114470897 114470919 -88614613 + AT_rich Low_complexity Low_complexity 1 22 0 927 339 24 73 chr5 114471055 114471885 -88613647 + L2 LINE L2 2018 2806 -508 1257 181 77 0 chr5 114474429 114474728 -88610804 + MER33 DNA MER1_type 3 324 0 22 0 0 0 chr5 114477627 114477649 -88607883 + AT_rich Low_complexity Low_complexity 1 22 0 216 304 0 29 chr5 114477656 114477725 -88607807 - MIR SINE MIR 0 262 196 210 309 15 0 chr5 114477725 114477793 -88607739 + (CATA)n Simple_repeat Simple_repeat 2 70 0 395 242 8 65 chr5 114477799 114477923 -88607609 - MIR SINE MIR -89 173 57 198 143 0 0 chr5 114478957 114478992 -88606540 + (CA)n Simple_repeat Simple_repeat 1 35 0 1143 197 87 27 chr5 114479645 114479945 -88605587 + MLT1A1 LTR MaLR 36 353 -12 208 210 32 0 chr5 114479978 114480040 -88605492 + (TA)n Simple_repeat Simple_repeat 2 65 0 923 203 40 0 chr5 114480361 114480538 -88604994 - MER5A DNA MER1_type -5 184 1 833 279 117 26 chr5 114480688 114481115 -88604417 + MLT1K LTR MaLR 12 477 -111 374 307 24 48 chr5 114481528 114481694 -88603838 + L2 LINE L2 2784 2944 -369 2338 91 0 14 chr5 114484925 114485222 -88600310 + AluSq SINE Alu 1 293 -20 306 231 0 0 chr5 114485241 114485306 -88600226 - L1MC4 LINE L1 -1339 6703 6639 272 336 160 34 chr5 114485311 114485919 -88599613 - L2 LINE L2 0 3272 2586 340 326 192 15 chr5 114486149 114486410 -88599122 + L2 LINE L2 86 392 -2922 259 312 26 0 chr5 114488222 114488299 -88597233 - MIR SINE MIR -70 138 60 524 208 0 9 chr5 114488336 114488442 -88597090 + LTR40a LTR ERVL 377 481 -38 22 0 0 0 chr5 114488546 114488568 -88596964 + AT_rich Low_complexity Low_complexity 1 22 0 582 214 63 0 chr5 114488855 114488981 -88596551 - MER94 DNA DNA 0 134 1 946 46 76 15 chr5 114489390 114489521 -88596011 - MER85 DNA T2_type 0 139 1 514 278 85 32 chr5 114490116 114490364 -88595168 - MIR SINE MIR 0 262 2 220 296 188 59 chr5 114490364 114490723 -88594809 + L2 LINE L2 2294 2702 -612 185 372 12 0 chr5 114490843 114490929 -88594603 - L2 LINE L2 -681 2633 2547 243 81 0 0 chr5 114491007 114491044 -88594488 + L1ME3 LINE L1 6109 6145 -17 310 235 43 17 chr5 114491167 114491282 -88594250 + L1MC4 LINE L1 7924 8041 -1 272 316 151 56 chr5 114491836 114492090 -88593442 - L2 LINE L2 -1006 2308 2080 615 51 0 0 chr5 114492090 114492169 -88593363 + (GA)n Simple_repeat Simple_repeat 2 80 0 272 316 151 56 chr5 114492169 114492862 -88592670 - L2 LINE L2 -1234 2080 1271 187 237 186 42 chr5 114494018 114494136 -88591396 - L2 LINE L2 -6 3307 3173 430 178 89 52 chr5 114495294 114495429 -88590103 + MLT1B LTR MaLR 1 140 -250 354 71 18 18 chr5 114495527 114495583 -88589949 + MLT1B LTR MaLR 319 374 0 293 329 12 0 chr5 114495688 114495773 -88589759 + MIR3 SINE MIR 117 202 -6 284 340 14 49 chr5 114495802 114495946 -88589586 - MIR3 SINE MIR -10 198 60 1042 147 10 106 chr5 114496581 114496873 -88588659 - AluSx SINE Alu -1 311 48 3315 113 42 96 chr5 114498065 114498714 -88586818 - LTR18B LTR ERVL 0 614 1 3472 244 64 30 chr5 114498806 114498961 -88586571 - L1M4c LINE L1 -4572 2387 2239 1984 169 16 8 chr5 114498961 114499333 -88586199 + THE1C LTR MaLR 1 375 0 3472 244 64 30 chr5 114499333 114501321 -88584211 - L1M4c LINE L1 -4720 2239 162 261 0 0 0 chr5 114501323 114501352 -88584180 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 342 115 0 0 chr5 114501351 114501403 -88584129 + (TA)n Simple_repeat Simple_repeat 1 52 0 455 330 11 6 chr5 114501441 114501617 -88583915 + (TAA)n Simple_repeat Simple_repeat 3 179 0 378 107 0 0 chr5 114501640 114501696 -88583836 + (TA)n Simple_repeat Simple_repeat 2 57 0 572 203 70 0 chr5 114501699 114501827 -88583705 - L1M4c LINE L1 -6712 147 11 271 376 94 0 chr5 114502511 114502681 -88582851 - L2 LINE L2 0 3272 3087 206 118 0 0 chr5 114502790 114502824 -88582708 + (T)n Simple_repeat Simple_repeat 1 34 0 413 332 11 47 chr5 114504046 114504236 -88581296 + MER5A DNA MER1_type 1 183 -6 290 272 110 35 chr5 114504304 114504481 -88581051 - MIR3 SINE MIR -67 141 6 265 315 99 72 chr5 114505082 114505263 -88580269 - MIR SINE MIR -54 208 23 507 274 149 27 chr5 114505358 114505686 -88579846 - MLT1J2 LTR MaLR -16 434 67 26 0 0 0 chr5 114505739 114505765 -88579767 + AT_rich Low_complexity Low_complexity 1 26 0 379 283 61 40 chr5 114505787 114505985 -88579547 + MIR SINE MIR 59 260 -2 1483 189 76 40 chr5 114505986 114506383 -88579149 - MLT2D LTR ERVL -3 411 1 2616 69 6 3 chr5 114507466 114507815 -88577717 - L1PA7 LINE L1 0 6154 5805 734 200 68 5 chr5 114507823 114508028 -88577504 + MER63 DNA MER1_type 767 984 -78 1828 134 0 25 chr5 114508568 114508844 -88576688 - AluSg SINE Alu -41 269 1 14822 113 24 17 chr5 114508844 114511719 -88573813 - L1P3 LINE L1 -2843 3618 724 334 360 7 7 chr5 114511922 114512069 -88573463 + L1MEd LINE L1 524 670 -5449 302 271 34 59 chr5 114512358 114512476 -88573056 + L1MEd LINE L1 983 1097 -5022 337 304 91 36 chr5 114512482 114513012 -88572520 + L1MEd LINE L1 1176 1734 -4576 683 167 48 0 chr5 114513186 114513312 -88572220 - L1PA15 LINE L1 -12 6153 6022 230 211 35 0 chr5 114513643 114513700 -88571832 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 182 114 0 29 chr5 114513787 114513822 -88571710 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 1271 207 47 13 chr5 114516435 114516735 -88568797 + MLT1E2 LTR MaLR 2 311 -315 250 250 0 0 chr5 114516737 114516801 -88568731 + LTR16B LTR ERVL 305 368 -96 1245 214 80 0 chr5 114516816 114517092 -88568440 + MLT1E2 LTR MaLR 322 619 -7 924 292 120 15 chr5 114517314 114517705 -88567827 + LTR16A LTR ERVL 9 440 -10 530 313 34 34 chr5 114517851 114518148 -88567384 + L1MEd LINE L1 499 795 -5735 350 258 161 16 chr5 114518456 114518642 -88566890 + L1MEd LINE L1 1206 1418 -5122 242 204 0 148 chr5 114518664 114518752 -88566780 + LTR16B LTR ERVL 1 75 -389 999 264 68 0 chr5 114518790 114519082 -88566450 + LTR16B LTR ERVL 153 464 0 1891 167 0 23 chr5 114519583 114519889 -88565643 + AluSx SINE Alu 1 299 -13 356 302 107 31 chr5 114519889 114520628 -88564904 + L1MEd LINE L1 2719 3513 -3027 269 313 54 27 chr5 114520629 114520741 -88564791 - L2 LINE L2 -196 3117 3003 526 258 47 56 chr5 114521414 114521647 -88563885 + L2 LINE L2 3082 3312 -1 359 299 37 30 chr5 114522699 114522833 -88562699 + L2 LINE L2 3179 3313 0 2325 240 78 16 chr5 114522882 114523565 -88561967 - MER21B LTR ERV1 -1 862 138 436 157 20 88 chr5 114523655 114523757 -88561775 - MER21B LTR ERV1 -757 106 12 579 327 99 14 chr5 114523885 114524249 -88561283 + LTR16C LTR ERVL 88 482 -9 2862 142 12 88 chr5 114524698 114525298 -88560234 - MLT2B3 LTR ERVL 0 554 1 21 0 0 0 chr5 114528624 114528645 -88556887 + AT_rich Low_complexity Low_complexity 1 21 0 410 255 119 12 chr5 114530964 114531207 -88554325 - HAL1 LINE L1 -175 2332 2064 445 283 88 54 chr5 114531215 114531455 -88554077 - HAL1 LINE L1 -413 2094 1847 290 237 11 43 chr5 114531463 114531556 -88553976 - HAL1 LINE L1 -733 1774 1685 294 234 47 28 chr5 114531922 114532029 -88553503 - HAL1 LINE L1 -821 1686 1578 369 248 144 80 chr5 114532033 114532113 -88553419 - HAL1 LINE L1 -999 1508 1435 1780 125 9 72 chr5 114532113 114532433 -88553099 - AluSx SINE Alu -12 300 1 369 248 144 80 chr5 114532433 114532928 -88552604 - HAL1 LINE L1 -1072 1435 896 1537 199 81 66 chr5 114533723 114534220 -88551312 - MLT1D LTR MaLR 0 505 2 319 323 31 0 chr5 114534222 114534352 -88551180 + L1MD3 LINE L1 6619 6752 -1243 309 238 25 0 chr5 114534414 114534494 -88551038 - LTR16A LTR ERVL -275 175 94 1408 193 11 0 chr5 114534506 114534780 -88550752 + L1MC4 LINE L1 6798 7074 -968 1530 221 141 13 chr5 114534799 114535346 -88550186 + L1MC4 LINE L1 7261 7877 -165 18499 78 5 2 chr5 114535470 114538934 -88546598 + L1PA7 LINE L1 2714 6142 -12 513 250 86 0 chr5 114538989 114539129 -88546403 - L2 LINE L2 -2098 1216 1065 453 81 0 0 chr5 114539303 114539365 -88546167 + (TG)n Simple_repeat Simple_repeat 1 62 0 235 235 12 35 chr5 114539586 114539671 -88545861 - L1MEd LINE L1 -6015 104 22 342 385 133 22 chr5 114539693 114540338 -88545194 - L2 LINE L2 -2128 1186 470 438 300 59 37 chr5 114540713 114540986 -88544546 + L1MEd LINE L1 650 928 -5191 2288 85 16 13 chr5 114540998 114541304 -88544228 + AluY SINE Alu 1 307 -4 3016 111 28 6 chr5 114541495 114541999 -88543533 - L1P4 LINE L1 -364 5801 5287 216 318 19 76 chr5 114542074 114542285 -88543247 + L2 LINE L2 1202 1400 -1914 382 185 74 0 chr5 114542307 114542388 -88543144 - Charlie1 DNA MER1_type 0 2761 2675 287 113 19 0 chr5 114543953 114544006 -88541526 + CT-rich Low_complexity Low_complexity 2 55 0 465 237 0 0 chr5 114544877 114544970 -88540562 + L2 LINE L2 3221 3313 0 1405 210 31 10 chr5 114544979 114545269 -88540263 - AluJo SINE Alu -16 296 1 482 234 114 29 chr5 114545970 114546145 -88539387 + MIR SINE MIR 7 196 -66 274 287 133 9 chr5 114546209 114546382 -88539150 - MIR SINE MIR -10 252 51 540 290 141 16 chr5 114546601 114546856 -88538676 + L2 LINE L2 3010 3296 -17 243 0 0 0 chr5 114547057 114547084 -88538448 + (T)n Simple_repeat Simple_repeat 1 27 0 402 57 0 0 chr5 114547952 114548005 -88537527 + (TG)n Simple_repeat Simple_repeat 2 54 0 206 342 139 0 chr5 114548988 114549067 -88536465 + MIR SINE MIR 59 148 -114 1791 143 0 31 chr5 114549327 114549613 -88535919 + AluJb SINE Alu 21 297 -15 492 232 191 6 chr5 114550881 114551049 -88534483 + MIR SINE MIR 63 261 -1 253 254 17 0 chr5 114551055 114551114 -88534418 + MIR SINE MIR 82 141 -67 27 0 0 0 chr5 114551695 114551722 -88533810 + AT_rich Low_complexity Low_complexity 1 27 0 524 151 32 0 chr5 114552638 114552731 -88532801 - MLT1F1 LTR MaLR -4 563 468 * 686 216 105 0 chr5 114552728 114552881 -88532651 - MLT1F1 LTR MaLR -211 356 188 317 125 18 0 chr5 114552881 114552937 -88532595 + GA-rich Low_complexity Low_complexity 2 58 0 618 320 53 18 chr5 114553377 114553605 -88531927 + MIR SINE MIR 23 258 -4 1313 167 18 51 chr5 114553697 114553943 -88531589 + MER33 DNA MER1_type 1 228 -2357 2023 131 0 0 chr5 114553943 114554251 -88531281 - AluSx SINE Alu 0 308 1 1313 167 18 51 chr5 114554251 114554341 -88531191 + MER33 DNA MER1_type 228 319 -5 8152 88 19 1 chr5 114554644 114556615 -88528917 + L1PA5 LINE L1 4162 6154 0 872 248 86 14 chr5 114557577 114557855 -88527677 + LTR16A LTR ERVL 16 313 -137 639 222 7 0 chr5 114557923 114558058 -88527474 + LTR16A LTR ERVL 310 445 -5 461 281 85 53 chr5 114558543 114558885 -88526647 + L1MEd LINE L1 685 1037 -5082 351 286 256 30 chr5 114559135 114559338 -88526194 + L2 LINE L2 2645 2893 -421 2443 85 0 7 chr5 114559820 114560125 -88525407 + AluSp SINE Alu 1 303 -10 222 349 9 57 chr5 114560859 114560965 -88524567 - MER5A DNA MER1_type -1 188 88 2229 101 0 0 chr5 114562055 114562361 -88523171 + AluSc SINE Alu 1 306 -3 339 302 79 12 chr5 114563171 114563331 -88522201 - MIR SINE MIR -62 146 3 919 179 6 6 chr5 114564861 114565017 -88520515 - FRAM SINE Alu -23 153 1 311 276 156 26 chr5 114565444 114565615 -88519917 + L1MC/D LINE L1 5403 5550 -856 420 20 0 0 chr5 114565615 114565664 -88519868 + (TA)n Simple_repeat Simple_repeat 2 50 0 311 276 156 26 chr5 114565664 114565893 -88519639 + L1MC/D LINE L1 5550 5863 -543 749 195 27 0 chr5 114566749 114566898 -88518634 + MER58B DNA MER1_type 173 325 -16 205 344 38 45 chr5 114567626 114567783 -88517749 + MER5A DNA MER1_type 3 158 -31 295 296 9 61 chr5 114568491 114568606 -88516926 - MER5B DNA MER1_type -7 171 63 303 224 118 0 chr5 114569275 114569360 -88516172 + L1ME4a LINE L1 6025 6119 -2 417 316 9 0 chr5 114569506 114569620 -88515912 + MIR SINE MIR 39 153 -55 5813 128 50 6 chr5 114569629 114571697 -88513835 + L1PBa LINE L1 8 2401 -4462 372 290 0 9 chr5 114571963 114572070 -88513462 + L2 LINE L2 3158 3263 -50 297 0 0 0 chr5 114572154 114572187 -88513345 + (TG)n Simple_repeat Simple_repeat 2 34 0 3284 147 59 36 chr5 114572556 114573667 -88511865 - L1MA9 LINE L1 -42 6270 5043 266 214 18 0 chr5 114574029 114574085 -88511447 + MER69 DNA AcHobo 1 57 -1169 2653 52 34 1 chr5 114575734 114576278 -88509254 + L1P3 LINE L1 5024 5582 -572 294 205 0 0 chr5 114576287 114576370 -88509162 + T-rich Low_complexity Low_complexity 1 83 0 464 265 13 7 chr5 114578134 114578285 -88507247 - L1ME3 LINE L1 -13 6149 5998 2136 125 7 10 chr5 114578329 114578343 -88507189 - AluSq SINE Alu -17 296 283 270 0 0 0 chr5 114578343 114578373 -88507159 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 2136 125 7 10 chr5 114578373 114578655 -88506877 - AluSq SINE Alu -30 283 1 523 168 10 0 chr5 114579296 114579397 -88506135 + MLT1D LTR MaLR 399 500 -5 568 247 156 13 chr5 114579429 114579698 -88505834 + MLT1H LTR MaLR 1 275 -274 390 224 112 0 chr5 114579764 114579880 -88505652 + MLT1H LTR MaLR 421 549 0 609 230 62 83 chr5 114581006 114581345 -88504187 + MLT1D LTR MaLR 36 367 -138 306 238 12 0 chr5 114581984 114582064 -88503468 - MER103 DNA DNA 0 166 86 700 107 83 8 chr5 114582177 114582298 -88503234 + Ricksha DNA DNA 372 501 -2745 7274 150 58 12 chr5 114582300 114583658 -88501874 + Ricksha DNA DNA 1189 2608 -638 313 304 126 77 chr5 114584866 114585152 -88500380 - MER102b DNA MER1_type -40 301 2 2312 95 0 3 chr5 114585368 114585662 -88499870 + AluSq SINE Alu 1 293 -20 890 270 68 29 chr5 114586155 114586611 -88498921 + L1ME4a LINE L1 5254 5727 -2081 236 267 47 0 chr5 114586735 114586821 -88498711 + L1ME4a LINE L1 5845 5934 -187 31 58 0 0 chr5 114586946 114586998 -88498534 + AT_rich Low_complexity Low_complexity 1 52 0 1989 150 10 65 chr5 114587476 114587862 -88497670 + MLT1A1 LTR MaLR 1 365 0 1602 145 40 47 chr5 114588009 114588306 -88497226 + AluJb SINE Alu 11 305 -7 21 57 0 0 chr5 114588648 114588683 -88496849 + AT_rich Low_complexity Low_complexity 1 35 0 198 336 41 8 chr5 114588843 114588965 -88496567 + L2 LINE L2 720 845 -2469 1991 126 58 30 chr5 114589363 114589728 -88495804 + THE1C LTR MaLR 1 375 0 318 253 0 0 chr5 114589789 114589888 -88495644 + GA-rich Low_complexity Low_complexity 2 100 0 452 261 42 34 chr5 114590368 114590487 -88495045 + MIR3 SINE MIR 40 159 -49 23 0 0 0 chr5 114590923 114590946 -88494586 + AT_rich Low_complexity Low_complexity 1 23 0 2087 124 0 0 chr5 114591683 114592005 -88493527 + AluSx SINE Alu 1 322 0 294 231 157 45 chr5 114592302 114592588 -88492944 + L1MC5 LINE L1 7561 7878 -83 1122 196 87 21 chr5 114592619 114592905 -88492627 + LTR52 LTR ERVL 1 305 -116 244 276 46 72 chr5 114592888 114593040 -88492492 + MER21B LTR ERV1 561 708 -155 * 639 240 20 98 chr5 114593434 114593680 -88491852 - L2 LINE L2 0 3313 3087 630 268 32 0 chr5 114593741 114593898 -88491634 + MER45A DNA AcHobo 17 178 0 196 315 42 28 chr5 114593899 114594042 -88491490 - L2 LINE L2 -300 2972 2828 2048 122 46 68 chr5 114594119 114594487 -88491045 - THE1B LTR MaLR -4 360 1 334 306 194 0 chr5 114595492 114595678 -88489854 - MIR SINE MIR -12 250 29 1430 264 95 59 chr5 114595997 114597189 -88488343 - HAL1b LINE L1 0 1348 114 24 0 0 0 chr5 114597441 114597465 -88488067 + AT_rich Low_complexity Low_complexity 1 24 0 619 270 97 8 chr5 114597576 114597813 -88487719 - HAL1 LINE L1 -2225 282 25 23 0 0 0 chr5 114597823 114597846 -88487686 + AT_rich Low_complexity Low_complexity 1 23 0 250 87 43 0 chr5 114597976 114598022 -88487510 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 1637 284 168 43 chr5 114599858 114600993 -88484539 + L2 LINE L2 1869 3150 -163 1978 101 20 0 chr5 114600993 114601289 -88484243 - LTR19A LTR ERV1 0 486 185 2137 97 0 14 chr5 114601289 114601599 -88483933 + AluSx SINE Alu 1 306 0 279 0 0 0 chr5 114603180 114603211 -88482321 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr5 114603682 114603703 -88481829 + AT_rich Low_complexity Low_complexity 1 21 0 410 298 28 103 chr5 114603935 114604187 -88481345 - L2 LINE L2 -446 2868 2636 498 306 25 0 chr5 114604197 114604357 -88481175 - L2 LINE L2 -939 2375 2212 487 254 59 0 chr5 114605202 114605320 -88480212 + MIR SINE MIR 46 170 -92 537 276 241 0 chr5 114605339 114605542 -88479990 - MIR SINE MIR -10 252 1 220 276 0 0 chr5 114606272 114606330 -88479202 + (TGAA)n Simple_repeat Simple_repeat 3 60 0 248 242 210 73 chr5 114606878 114607002 -88478530 + MIR SINE MIR 105 245 -17 2237 32 46 11 chr5 114607607 114607887 -88477645 + AluY SINE Alu 9 298 -13 303 202 191 0 chr5 114608479 114608563 -88476969 - MLT1D LTR MaLR -405 100 1 21 57 0 0 chr5 114608613 114608648 -88476884 + AT_rich Low_complexity Low_complexity 1 35 0 193 172 0 103 chr5 114609183 114609241 -88476291 + L3b LINE CR1 1421 1472 -111 23 0 0 0 chr5 114609364 114609387 -88476145 + AT_rich Low_complexity Low_complexity 1 23 0 415 103 0 0 chr5 114609419 114609487 -88476045 + L1PA15 LINE L1 6095 6162 -3 412 266 29 36 chr5 114609930 114610069 -88475463 - L2 LINE L2 -2127 1187 1050 287 234 36 27 chr5 114610129 114610240 -88475292 + MLT1K LTR MaLR 354 465 -123 829 238 86 28 chr5 114610620 114610910 -88474622 - MLT1J2 LTR MaLR -143 307 1 262 314 20 39 chr5 114611023 114611125 -88474407 - MIR SINE MIR -117 145 46 342 196 14 105 chr5 114611149 114611187 -88474345 + MER113 DNA MER1_type? 1 41 -480 1831 184 105 16 chr5 114611187 114611616 -88473916 + MLT1C LTR MaLR 1 467 0 342 196 14 105 chr5 114611616 114611720 -88473812 + MER113 DNA MER1_type? 41 130 -391 5159 31 0 0 chr5 114612335 114612940 -88472592 + L1PA4 LINE L1 5546 6150 -5 11302 45 1 1 chr5 114613961 114615454 -88470078 + L1P LINE L1 1646 3138 -3008 384 326 44 0 chr5 114616134 114616269 -88469263 - MIR SINE MIR 0 262 122 362 314 29 35 chr5 114617440 114617612 -88467920 - L3 LINE CR1 -607 970 800 2338 57 3 7 chr5 114617975 114618273 -88467259 - AluY SINE Alu -14 297 1 1042 271 61 9 chr5 114618278 114618559 -88466973 + MSTD LTR MaLR 52 354 -42 2100 141 0 0 chr5 114618559 114618850 -88466682 - AluSx SINE Alu -21 291 1 1042 271 61 9 chr5 114618850 114618896 -88466636 + MSTD LTR MaLR 354 396 0 236 271 82 12 chr5 114619369 114619454 -88466078 + MIR SINE MIR 111 201 -61 2101 186 14 14 chr5 114619529 114619787 -88465745 - MLT1C LTR MaLR -32 435 175 431 49 33 0 chr5 114619787 114619848 -88465684 + (CATA)n Simple_repeat Simple_repeat 4 66 0 2101 186 14 14 chr5 114619848 114620024 -88465508 - MLT1C LTR MaLR -291 176 1 23 0 0 0 chr5 114620024 114620047 -88465485 + AT_rich Low_complexity Low_complexity 1 23 0 311 246 0 15 chr5 114620217 114620282 -88465250 - MIR SINE MIR -125 83 20 29 28 0 0 chr5 114621869 114621905 -88463627 + AT_rich Low_complexity Low_complexity 1 36 0 435 245 28 49 chr5 114622492 114622635 -88462897 - MER5A DNA MER1_type 0 189 50 736 292 138 30 chr5 114622873 114623280 -88462252 - MLT1L LTR MaLR -13 602 152 337 213 0 0 chr5 114624065 114624126 -88461406 - L2 LINE L2 -6 3307 3247 1963 128 16 40 chr5 114674141 114674442 -88411090 - L1 LINE L1 -1305 4841 4549 2070 144 3 0 chr5 114674442 114674740 -88410792 - AluSx SINE Alu -13 299 1 1963 128 16 40 chr5 114674740 114674813 -88410719 - L1 LINE L1 -1597 4549 4476 2672 108 59 0 chr5 114674857 114675266 -88410266 - L1MA3 LINE L1 -353 5952 5520 5273 166 15 16 chr5 114675368 114676461 -88409071 + L1 LINE L1 3400 4490 -1656 451 228 0 0 chr5 114676465 114676544 -88408988 + AluJ/FLAM SINE Alu 4 82 -230 9291 38 3 2 chr5 114676644 114677822 -88407710 + L1P LINE L1 2101 3280 -2866 241 323 68 45 chr5 114678094 114678227 -88407305 - L2 LINE L2 -397 2917 2782 2379 88 0 10 chr5 114678239 114678544 -88406988 + AluY SINE Alu 1 302 -9 982 322 48 6 chr5 114678885 114679242 -88406290 - L2 LINE L2 -546 2768 2397 22 0 0 0 chr5 114679242 114679264 -88406268 + AT_rich Low_complexity Low_complexity 1 22 0 467 316 50 32 chr5 114679833 114680111 -88405421 + HAL1 LINE L1 2 284 -2223 2318 274 149 49 chr5 114680804 114682530 -88403002 + HAL1 LINE L1 2 1899 -608 250 275 9 104 chr5 114682657 114682879 -88402653 + HAL1 LINE L1 1887 2087 -420 233 203 54 0 chr5 114682974 114683048 -88402484 + HAL1 LINE L1 2321 2398 -109 27 73 0 0 chr5 114683108 114683163 -88402369 + AT_rich Low_complexity Low_complexity 1 55 0 27 73 0 0 chr5 114684019 114684074 -88401458 + AT_rich Low_complexity Low_complexity 1 55 0 2443 70 0 0 chr5 114685505 114685806 -88399726 - AluSg1 SINE Alu -8 301 1 180 0 0 0 chr5 114685934 114685954 -88399578 + (CA)n Simple_repeat Simple_repeat 1 20 0 222 37 0 0 chr5 114686760 114686787 -88398745 + (CA)n Simple_repeat Simple_repeat 2 28 0 2901 0 0 0 chr5 114686787 114687097 -88398435 - AluYa5 SINE Alu -1 310 1 300 364 16 0 chr5 114687414 114687535 -88397997 - L3 LINE CR1 -7 1570 1448 2443 70 0 6 chr5 114688275 114688588 -88396944 + AluY SINE Alu 1 311 0 30 0 0 0 chr5 114688687 114688717 -88396815 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 114689102 114689131 -88396401 + AT_rich Low_complexity Low_complexity 1 29 0 29 60 0 0 chr5 114690214 114690264 -88395268 + AT_rich Low_complexity Low_complexity 1 50 0 1912 128 69 28 chr5 114690779 114691139 -88394393 + THE1C LTR MaLR 1 375 0 9376 105 11 123 chr5 114691139 114691517 -88394015 + THE1C-int LTR MaLR 1 419 -1161 2243 121 3 0 chr5 114691517 114691823 -88393709 - AluSx SINE Alu 0 312 6 9376 105 11 123 chr5 114691823 114693222 -88392310 + THE1C-int LTR MaLR 419 1580 0 1631 150 107 26 chr5 114693222 114693569 -88391963 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 114693835 114693857 -88391675 + AT_rich Low_complexity Low_complexity 1 22 0 242 220 0 20 chr5 114696521 114696571 -88388961 - L2 LINE L2 -4 3309 3261 664 291 76 70 chr5 114697178 114697707 -88387825 - MLT1K LTR MaLR -10 578 47 2028 133 4 0 chr5 114698636 114698915 -88386617 + AluSg SINE Alu 1 280 -30 228 218 0 0 chr5 114698915 114698970 -88386562 + (CCCA)n Simple_repeat Simple_repeat 1 55 0 510 307 69 11 chr5 114700352 114700541 -88384991 + MIR SINE MIR 50 249 -13 209 286 32 0 chr5 114700563 114700626 -88384906 + (CAT)n Simple_repeat Simple_repeat 2 66 0 360 0 0 0 chr5 114701461 114701501 -88384031 + (CA)n Simple_repeat Simple_repeat 1 40 0 1790 110 3 60 chr5 114702098 114702309 -88383223 - AluSq SINE Alu 0 313 122 2113 125 6 10 chr5 114702309 114702622 -88382910 + AluSq SINE Alu 1 312 -1 1790 110 3 60 chr5 114702622 114702711 -88382821 - AluSq SINE Alu -191 122 30 1517 251 124 43 chr5 114703009 114703710 -88381822 + HAL1 LINE L1 240 997 -1510 750 254 140 12 chr5 114703691 114704026 -88381506 + HAL1 LINE L1 1220 1597 -910 * 260 130 22 0 chr5 114704032 114704078 -88381454 + MLT1I LTR MaLR 5 51 -358 2317 148 25 38 chr5 114704116 114704561 -88380971 + L1MA9 LINE L1 5643 6081 -231 467 198 0 0 chr5 114704563 114704644 -88380888 + L1MA9 LINE L1 6180 6260 -52 2424 76 0 10 chr5 114704717 114705031 -88380501 - AluY SINE Alu 0 311 1 2287 77 13 3 chr5 114707427 114707727 -88377805 - AluSc SINE Alu -6 303 1 28 86 0 0 chr5 114707913 114707983 -88377549 + AT_rich Low_complexity Low_complexity 1 70 0 592 302 103 29 chr5 114708136 114708378 -88377154 + MIR SINE MIR 3 262 0 282 29 0 0 chr5 114708951 114708986 -88376546 + (CA)n Simple_repeat Simple_repeat 2 36 0 340 164 0 0 chr5 114709076 114709131 -88376401 - L2 LINE L2 -2 3311 3257 2350 78 0 19 chr5 114709253 114709561 -88375971 - AluY SINE Alu -9 302 1 349 385 68 6 chr5 114710054 114710215 -88375317 - MER5B DNA MER1_type -3 175 5 216 0 0 0 chr5 114711149 114711173 -88374359 + (A)n Simple_repeat Simple_repeat 1 24 0 703 280 78 5 chr5 114711222 114711440 -88374092 - MIR SINE MIR -3 259 26 2419 75 0 0 chr5 114711551 114711859 -88373673 + AluY SINE Alu 1 308 -3 2037 100 31 3 chr5 114711870 114712161 -88373371 + AluSc SINE Alu 3 301 -8 1900 194 42 123 chr5 114712448 114712634 -88372898 + MLT1F1 LTR MaLR 1 201 -366 1201 209 121 21 chr5 114712634 114712974 -88372558 - MLT1A2 LTR MaLR 0 374 1 1900 194 42 123 chr5 114712974 114713404 -88372128 + MLT1F1 LTR MaLR 201 567 0 438 283 66 18 chr5 114713456 114713622 -88371910 + MIR SINE MIR 89 262 0 943 223 29 70 chr5 114714733 114715074 -88370458 - L1M4 LINE L1 -1507 4919 4593 1255 219 22 51 chr5 114715178 114715782 -88369750 - L1MCa LINE L1 -3587 2839 2254 343 168 59 79 chr5 114715780 114715881 -88369651 - L1MCa LINE L1 -5408 1018 920 * 614 126 81 0 chr5 114715880 114715991 -88369541 + L1MCa LINE L1 2180 2299 -4127 1805 219 60 13 chr5 114716016 114716463 -88369069 - L1MCa LINE L1 -5497 929 462 584 194 62 60 chr5 114716592 114717037 -88368495 - L1MCa LINE L1 -3728 2698 2254 314 151 75 75 chr5 114717040 114717133 -88368399 - L1MCa LINE L1 -5414 1012 920 * 614 126 81 0 chr5 114717132 114717243 -88368289 + L1MCa LINE L1 2180 2299 -4127 3818 215 50 15 chr5 114717267 114718146 -88367386 - L1MCa LINE L1 -5497 929 20 296 259 113 26 chr5 114718335 114718480 -88367052 + MIR SINE MIR 41 204 -58 249 33 0 0 chr5 114719162 114719192 -88366340 + (CA)n Simple_repeat Simple_repeat 1 30 0 2841 10 0 0 chr5 114720343 114720654 -88364878 - AluY SINE Alu 0 311 1 24 32 0 0 chr5 114720942 114720973 -88364559 + AT_rich Low_complexity Low_complexity 1 31 0 211 330 33 22 chr5 114722934 114723025 -88362507 + MIR SINE MIR 66 145 -63 2223 117 0 7 chr5 114723663 114723970 -88361562 + AluSx SINE Alu 1 305 -7 2286 125 0 0 chr5 114725266 114725577 -88359955 + AluSx SINE Alu 1 311 -1 325 357 81 19 chr5 114726286 114726496 -88359036 + MIR SINE MIR 12 234 -28 37 62 0 0 chr5 114727250 114727315 -88358217 + AT_rich Low_complexity Low_complexity 1 65 0 318 250 95 54 chr5 114727520 114727560 -88357972 - L2 LINE L2 -982 2332 2295 1932 169 45 36 chr5 114727560 114727980 -88357552 + MSTB LTR MaLR 3 426 0 318 250 95 54 chr5 114727980 114728107 -88357425 - L2 LINE L2 -1019 2295 2158 1738 178 20 0 chr5 114728427 114728719 -88356813 + AluJo SINE Alu 11 308 -4 2394 81 0 0 chr5 114728723 114729020 -88356512 + AluY SINE Alu 1 297 -14 2202 117 7 0 chr5 114730127 114730435 -88355097 - AluSx SINE Alu 0 312 3 329 331 70 37 chr5 114732176 114732418 -88353114 + MER102a DNA MER1_type 71 320 -10 609 270 87 39 chr5 114732500 114732905 -88352627 - MLT1L LTR MaLR -17 598 88 2175 174 7 33 chr5 114732907 114733332 -88352200 - MLT2D LTR ERVL 0 414 1 580 256 199 5 chr5 114733794 114733985 -88351547 + MIR SINE MIR 2 229 -33 2460 61 0 3 chr5 114734330 114734625 -88350907 + AluY SINE Alu 1 294 -17 255 93 0 0 chr5 114736559 114736602 -88348930 + (A)n Simple_repeat Simple_repeat 1 43 0 429 239 106 9 chr5 114737068 114737181 -88348351 - MIR3 SINE MIR 0 208 85 192 171 0 0 chr5 114739120 114739155 -88346377 - MER5A DNA MER1_type -7 182 148 183 294 118 15 chr5 114739478 114739546 -88345986 - MER5A DNA MER1_type -106 83 9 1699 153 0 0 chr5 114740223 114740485 -88345047 - AluY SINE Alu -6 305 44 282 304 163 7 chr5 114742449 114742584 -88342948 + MIR3 SINE MIR 5 160 -48 184 306 0 48 chr5 114743555 114743617 -88341915 + L3 LINE CR1 1518 1576 -1 24 32 0 0 chr5 114744492 114744523 -88341009 + AT_rich Low_complexity Low_complexity 1 31 0 277 184 0 0 chr5 114744666 114744715 -88340817 - MIR3 SINE MIR -9 199 151 653 278 5 11 chr5 114744715 114744902 -88340630 - MER117 DNA MER1_type -3 194 9 187 299 52 62 chr5 114744922 114745019 -88340513 - MIR SINE MIR -115 147 52 23 33 0 0 chr5 114745092 114745122 -88340410 + AT_rich Low_complexity Low_complexity 1 30 0 622 288 110 32 chr5 114745676 114745957 -88339575 - L2 LINE L2 0 3313 3011 212 179 0 0 chr5 114745971 114746010 -88339522 + A-rich Low_complexity Low_complexity 1 39 0 1303 270 73 85 chr5 114746108 114746336 -88339196 - L2 LINE L2 -1187 2127 1898 2382 78 0 28 chr5 114746336 114746657 -88338875 - AluSp SINE Alu 0 313 2 1303 270 73 85 chr5 114746657 114747239 -88338293 - L2 LINE L2 -1416 1898 1327 21 95 0 0 chr5 114748572 114748635 -88336897 + AT_rich Low_complexity Low_complexity 1 63 0 387 257 63 7 chr5 114749125 114749258 -88336274 + L1MC4 LINE L1 6444 6592 -1428 1041 71 0 29 chr5 114749266 114749406 -88336126 + AluY SINE Alu 157 292 -19 186 189 0 0 chr5 114749424 114749461 -88336071 + (TATG)n Simple_repeat Simple_repeat 2 38 0 334 211 211 18 chr5 114749461 114749632 -88335900 + L1MC4 LINE L1 6588 6791 -1251 25 31 0 0 chr5 114749765 114749797 -88335735 + AT_rich Low_complexity Low_complexity 1 32 0 567 277 48 45 chr5 114749898 114750247 -88335285 + MLT1L LTR MaLR 108 521 -67 1490 225 110 50 chr5 114750865 114750892 -88334640 + L1ME3A LINE L1 5208 5232 -938 6458 120 26 21 chr5 114750892 114751957 -88333575 + MER11C LTR ERVK 1 1071 0 1490 225 110 50 chr5 114751957 114752108 -88333424 + L1ME3A LINE L1 5232 5372 -798 2083 129 56 6 chr5 114752108 114752465 -88333067 + THE1C LTR MaLR 1 375 0 1490 225 110 50 chr5 114752465 114753141 -88332391 + L1ME3A LINE L1 5372 6163 -7 2239 107 0 0 chr5 114753204 114753512 -88332020 - AluSg1 SINE Alu -1 308 1 196 279 0 81 chr5 114753880 114753991 -88331541 + L2 LINE L2 2958 3059 -213 257 128 21 0 chr5 114754071 114754118 -88331414 + (TA)n Simple_repeat Simple_repeat 2 49 0 461 254 15 37 chr5 114754690 114754824 -88330708 + L2 LINE L2 3179 3309 -4 344 333 167 14 chr5 114755226 114755436 -88330096 + MIR SINE MIR 21 262 0 253 235 86 12 chr5 114756363 114756444 -88329088 - MIR3 SINE MIR -4 204 118 256 229 57 107 chr5 114756507 114756586 -88328946 + L2 LINE L2 3158 3229 -84 1757 185 45 21 chr5 114756586 114756964 -88328568 + MLT1B LTR MaLR 1 387 -3 256 229 57 107 chr5 114756964 114757024 -88328508 + L2 LINE L2 3229 3290 -23 261 260 1 15 chr5 114757029 114757105 -88328427 + GA-rich Low_complexity Low_complexity 3 57 0 215 304 0 0 chr5 114758201 114758280 -88327252 + (TG)n Simple_repeat Simple_repeat 2 80 0 784 245 50 55 chr5 114758688 114759031 -88326501 - Charlie8 DNA MER1_type -2018 399 59 780 295 69 0 chr5 114759213 114759430 -88326102 + MIR SINE MIR 31 262 0 276 313 42 0 chr5 114760724 114760820 -88324712 - L2 LINE L2 -12 3260 3161 25 31 0 0 chr5 114761435 114761467 -88324065 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 114762300 114762332 -88323200 + AT_rich Low_complexity Low_complexity 1 32 0 219 274 16 0 chr5 114763943 114764005 -88321527 - MIR SINE MIR -142 120 58 247 250 62 62 chr5 114765315 114765411 -88320121 + MIR SINE MIR 117 212 -50 712 323 35 4 chr5 114765833 114766059 -88319473 + MIR SINE MIR 26 258 -4 351 378 15 84 chr5 114766824 114767216 -88318316 + L2 LINE L2 2869 3233 -39 26 82 0 0 chr5 114767323 114767384 -88318148 + AT_rich Low_complexity Low_complexity 1 61 0 194 333 205 0 chr5 114767666 114767783 -88317749 + MIR3 SINE MIR 38 178 -30 2282 159 46 20 chr5 114768642 114769300 -88316232 - LTR26E LTR ERV1 -7 615 2 320 233 41 14 chr5 114769653 114769726 -88315806 - L2 LINE L2 0 3313 3239 21 36 0 0 chr5 114771319 114771347 -88314185 + AT_rich Low_complexity Low_complexity 1 28 0 2090 124 14 0 chr5 114771392 114771682 -88313850 - AluSg SINE Alu -15 295 2 2243 90 13 13 chr5 114772175 114772485 -88313047 - AluSq SINE Alu -3 310 1 824 244 136 64 chr5 114772772 114773243 -88312289 - MLT1D LTR MaLR 0 505 1 1251 212 97 25 chr5 114773387 114773779 -88311753 - MER69 DNA AcHobo 0 2526 2107 2477 48 0 10 chr5 114773793 114774106 -88311426 - AluY SINE Alu -1 310 1 375 210 0 12 chr5 114774546 114774627 -88310905 - MER69 DNA AcHobo -97 80 1 201 204 0 23 chr5 114774648 114774692 -88310840 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1835 173 3 0 chr5 114777890 114778191 -88307341 + AluSx SINE Alu 2 303 -9 213 132 0 0 chr5 114779003 114779041 -88306491 + (GAAAA)n Simple_repeat Simple_repeat 5 42 0 254 271 148 36 chr5 114780219 114780577 -88304955 - L1ME4a LINE L1 -3 6118 5721 284 290 97 26 chr5 114781200 114781384 -88304148 + MIR3 SINE MIR 6 206 -2 381 206 49 39 chr5 114781696 114781798 -88303734 - MER112 DNA MER1_type -6 254 152 22 35 0 0 chr5 114784465 114784494 -88301038 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 114784729 114784765 -88300767 + AT_rich Low_complexity Low_complexity 1 36 0 204 203 17 34 chr5 114784810 114784869 -88300663 + MIR SINE MIR 195 252 -10 1578 261 85 6 chr5 114785143 114785661 -88299871 + L1ME1 LINE L1 5599 6157 -9 442 337 93 28 chr5 114785746 114786316 -88299216 + HAL1b LINE L1 129 735 -613 2035 235 53 80 chr5 114786642 114787624 -88297908 + L1MC5 LINE L1 6635 7527 -434 233 274 33 103 chr5 114787714 114787798 -88297734 + L1ME3 LINE L1 5965 6053 -117 2491 64 0 0 chr5 114787798 114788095 -88297437 - AluY SINE Alu -14 297 1 233 274 33 103 chr5 114788095 114788221 -88297311 + L1ME3 LINE L1 6053 6163 -7 183 80 0 0 chr5 114788433 114788458 -88297074 + (CA)n Simple_repeat Simple_repeat 1 25 0 206 116 87 43 chr5 114788478 114788547 -88296985 + (TTTAA)n Simple_repeat Simple_repeat 1 72 0 23 33 0 0 chr5 114788833 114788863 -88296669 + AT_rich Low_complexity Low_complexity 1 30 0 202 298 18 0 chr5 114788883 114788940 -88296592 + (CATA)n Simple_repeat Simple_repeat 2 59 0 258 200 67 22 chr5 114788942 114789032 -88296500 + L1MC/D LINE L1 5376 5469 -2339 1786 147 0 66 chr5 114789267 114789587 -88295945 - AluJb SINE Alu -13 299 1 959 254 88 77 chr5 114790608 114791065 -88294467 + LTR16B LTR ERVL 3 464 0 2078 103 10 7 chr5 114791098 114791390 -88294142 + AluSc SINE Alu 2 294 -15 345 310 40 23 chr5 114791715 114791889 -88293643 + MERVL LTR ERVL 2510 2686 -2968 2605 195 53 4 chr5 114792053 114792576 -88292956 + MER44D DNA MER2_type 1 604 -1 281 352 23 8 chr5 114792724 114792852 -88292680 + MERVL LTR ERVL 4201 4330 -1155 539 231 34 82 chr5 114793058 114793266 -88292266 + MERVL LTR ERVL 4259 4456 -540 250 221 13 78 chr5 114793829 114793906 -88291626 - MIR SINE MIR -71 191 120 293 320 88 102 chr5 114794664 114795017 -88290515 - L2 LINE L2 -6 3266 2919 195 237 17 17 chr5 114795070 114795129 -88290403 - L2 LINE L2 -954 2360 2302 1314 307 76 32 chr5 114795156 114795822 -88289710 - L2 LINE L2 -148 3165 2466 305 325 68 11 chr5 114795907 114796098 -88289434 - L2 LINE L2 -1312 2002 1801 243 264 81 11 chr5 114796778 114796865 -88288667 - MIR3 SINE MIR -2 206 114 683 250 35 40 chr5 114797033 114797233 -88288299 - MIR SINE MIR -18 244 46 190 311 0 16 chr5 114797280 114797341 -88288191 - L2 LINE L2 -4 3309 3250 2270 99 3 10 chr5 114797662 114797966 -88287566 - AluSx SINE Alu -8 304 3 958 253 172 24 chr5 114798848 114799302 -88286230 + MER113 DNA MER1_type? 1 521 0 189 261 153 36 chr5 114799454 114799565 -88285967 + MIR SINE MIR 21 144 -118 21 0 0 0 chr5 114800564 114800585 -88284947 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr5 114801088 114801115 -88284417 + (TG)n Simple_repeat Simple_repeat 1 27 0 26 50 0 0 chr5 114801654 114801694 -88283838 + AT_rich Low_complexity Low_complexity 1 40 0 185 0 40 0 chr5 114802692 114802717 -88282815 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 267 268 105 23 chr5 114803541 114803665 -88281867 + MIR SINE MIR 4 145 -63 299 316 110 7 chr5 114804014 114804150 -88281382 + MIR SINE MIR 2 151 -111 2344 60 3 0 chr5 114804173 114804457 -88281075 + AluY SINE Alu 1 285 -26 201 74 0 0 chr5 114804490 114804517 -88281015 + (TG)n Simple_repeat Simple_repeat 1 27 0 24 0 0 0 chr5 114804517 114804541 -88280991 + AT_rich Low_complexity Low_complexity 1 24 0 1169 205 39 0 chr5 114805395 114805624 -88279908 - MSTA LTR MaLR 0 428 191 233 91 0 0 chr5 114805725 114805758 -88279774 - Alu SINE Alu -100 33 1 1264 153 0 0 chr5 114805759 114805955 -88279577 - MSTA LTR MaLR -232 196 1 256 353 10 20 chr5 114805955 114806007 -88279525 + L2 LINE L2 3213 3265 -48 2481 72 0 0 chr5 114806007 114806312 -88279220 + AluY SINE Alu 5 309 -2 256 353 10 20 chr5 114806312 114806361 -88279171 + L2 LINE L2 3265 3313 0 198 337 56 45 chr5 114807430 114807519 -88278013 + L2 LINE L2 3137 3226 -46 1108 209 4 22 chr5 114809267 114809492 -88276040 - MER58A DNA MER1_type 0 224 4 764 86 34 0 chr5 114809713 114809830 -88275702 + MSTA LTR MaLR 1 121 -307 1161 69 56 0 chr5 114809832 114809992 -88275540 + MSTA LTR MaLR 260 428 0 525 223 39 0 chr5 114810068 114810198 -88275334 + MIR SINE MIR 128 262 0 476 256 48 30 chr5 114812224 114812392 -88273140 - MLT1J2 LTR MaLR -197 253 83 4033 276 67 16 chr5 114812457 114813874 -88271658 - L2 LINE L2 -164 3149 1671 280 336 38 38 chr5 114814807 114814938 -88270594 - L2 LINE L2 -5 3267 3137 913 310 79 38 chr5 114815397 114816107 -88269425 + L2 LINE L2 2456 3298 -15 683 269 0 33 chr5 114816798 114816980 -88268552 + LTR16A LTR ERVL 273 448 -2 339 230 54 0 chr5 114816983 114817057 -88268475 - MLT1K LTR MaLR -108 480 403 611 314 31 42 chr5 114818137 114818424 -88267108 - MLT1K LTR MaLR -260 328 45 2314 89 0 19 chr5 114818606 114818919 -88266613 - AluSx SINE Alu -5 307 1 2006 99 40 30 chr5 114818960 114819264 -88266268 - AluY SINE Alu -4 307 1 515 259 177 18 chr5 114819644 114819864 -88265668 - L2 LINE L2 -10 3303 3049 1657 279 171 52 chr5 114820327 114820671 -88264861 - L2 LINE L2 -2120 1194 892 2130 182 40 52 chr5 114820671 114821176 -88264356 + MLT1D LTR MaLR 3 501 -4 1657 279 171 52 chr5 114821176 114821850 -88263682 - L2 LINE L2 -2422 892 55 187 103 44 29 chr5 114822267 114822297 -88263235 + (TA)n Simple_repeat Simple_repeat 1 29 -40 2261 98 7 0 chr5 114822297 114822594 -88262938 - AluSq SINE Alu -14 299 1 187 103 44 29 chr5 114822594 114822631 -88262901 + (TA)n Simple_repeat Simple_repeat 29 69 0 1482 239 71 7 chr5 114822641 114823089 -88262443 + L1M4 LINE L1 4175 4651 -1495 2526 219 33 29 chr5 114823133 114824039 -88261493 + L1MC2 LINE L1 4567 5483 -759 4216 188 43 11 chr5 114824039 114824937 -88260595 + L1MC2 LINE L1 5409 6335 -9 2526 219 33 29 chr5 114824937 114824980 -88260552 + L1MC2 LINE L1 5483 5524 -718 240 143 0 0 chr5 114826020 114826062 -88259470 + (TCC)n Simple_repeat Simple_repeat 2 43 0 323 344 80 33 chr5 114826521 114826672 -88258860 + L3b LINE CR1 1390 1547 -36 2645 33 0 3 chr5 114827103 114827407 -88258125 + AluY SINE Alu 1 303 -8 21 0 0 0 chr5 114827569 114827590 -88257942 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 114827920 114827946 -88257586 + AT_rich Low_complexity Low_complexity 1 26 0 245 333 52 62 chr5 114830817 114830913 -88254619 + L2 LINE L2 3126 3220 -52 220 220 121 98 chr5 114831007 114831139 -88254393 + MIR SINE MIR 122 256 -6 180 204 82 41 chr5 114831738 114831787 -88253745 - MER5B DNA MER1_type -14 164 114 202 380 0 0 chr5 114832546 114832625 -88252907 + MIR3 SINE MIR 109 187 -21 327 211 106 16 chr5 114833889 114834012 -88251520 + L1MC4 LINE L1 7909 8042 0 27 73 0 0 chr5 114834459 114834514 -88251018 + AT_rich Low_complexity Low_complexity 1 55 0 300 53 0 0 chr5 114835171 114835209 -88250323 + (CA)n Simple_repeat Simple_repeat 1 38 0 269 273 0 0 chr5 114835307 114835373 -88250159 + MLT1I LTR MaLR 106 171 -238 384 236 112 0 chr5 114835460 114835549 -88249983 + MLT1I LTR MaLR 293 391 -18 21 0 0 0 chr5 114836498 114836519 -88249013 + AT_rich Low_complexity Low_complexity 1 21 0 370 219 19 48 chr5 114836543 114836648 -88248884 + MIR SINE MIR 67 168 -94 1340 109 0 0 chr5 114837054 114837237 -88248295 - AluSg/x SINE Alu -1 311 129 597 227 74 37 chr5 114837339 114837502 -88248030 - MIR SINE MIR -49 213 45 380 111 16 0 chr5 114839621 114839684 -88245848 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 256 269 34 114 chr5 114840428 114840577 -88244955 - L2 LINE L2 -609 2705 2569 379 205 98 18 chr5 114843696 114843808 -88241724 - MLT1I LTR MaLR -10 399 279 2154 102 3 0 chr5 114843851 114844157 -88241375 - AluSp SINE Alu 0 307 1 306 305 46 10 chr5 114844249 114844404 -88241128 - MLT1J2 LTR MaLR -250 159 1 492 354 128 25 chr5 114844708 114845075 -88240457 - L2 LINE L2 -10 3303 2899 2154 142 0 0 chr5 114845086 114845395 -88240137 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr5 114845686 114845707 -88239825 + AT_rich Low_complexity Low_complexity 1 21 0 1155 265 98 41 chr5 114846270 114846707 -88238825 - LTR16C LTR ERVL 0 491 30 1620 197 42 77 chr5 114847188 114847547 -88237985 + L1MC5 LINE L1 6657 7027 -956 1625 114 146 0 chr5 114847547 114847801 -88237731 - AluSc SINE Alu -8 291 1 14949 126 19 15 chr5 114847802 114848618 -88236914 - Tigger1 DNA MER2_type -2 2416 1605 2176 94 0 60 chr5 114848618 114848936 -88236596 - AluSq SINE Alu -14 299 1 14949 126 19 15 chr5 114848936 114849228 -88236304 - Tigger1 DNA MER2_type -813 1605 1316 2058 89 3 77 chr5 114849228 114849564 -88235968 - AluY SINE Alu 0 311 1 14949 126 19 15 chr5 114849564 114850861 -88234671 - Tigger1 DNA MER2_type -1102 1316 1 1620 197 42 77 chr5 114850861 114851124 -88234408 + L1MC5 LINE L1 7026 7250 -733 70 68 0 0 chr5 114851125 114851258 -88234274 + AT_rich Low_complexity Low_complexity 1 133 0 920 240 144 59 chr5 114851363 114851938 -88233594 + L1MC5 LINE L1 7262 7885 -76 2371 88 0 7 chr5 114852062 114852370 -88233162 + AluSx SINE Alu 1 306 -6 210 286 29 57 chr5 114852641 114852746 -88232786 - MIR SINE MIR 0 262 161 24 53 0 0 chr5 114853208 114853246 -88232286 + GC_rich Low_complexity Low_complexity 1 38 0 406 276 32 32 chr5 114855168 114855385 -88230147 + L1M4 LINE L1 4817 5033 -1113 184 158 132 0 chr5 114857458 114857496 -88228036 + L2 LINE L2 3206 3248 -65 376 309 80 77 chr5 114857502 114857813 -88227719 - L2 LINE L2 -507 2807 2496 1024 306 102 68 chr5 114857823 114858598 -88226934 - L2 LINE L2 -706 2608 1808 216 0 0 0 chr5 114858751 114858775 -88226757 + (TA)n Simple_repeat Simple_repeat 2 25 0 669 269 47 10 chr5 114858843 114859036 -88226496 + MIR SINE MIR 63 262 0 35 0 0 0 chr5 114861328 114861363 -88224169 + AT_rich Low_complexity Low_complexity 1 35 0 895 286 34 48 chr5 114861567 114861920 -88223612 + L2 LINE L2 2966 3313 0 638 308 49 0 chr5 114862054 114862239 -88223293 - MIR SINE MIR -54 208 15 906 283 82 23 chr5 114862239 114862766 -88222766 - L1ME3A LINE L1 -320 5850 5293 324 262 81 20 chr5 114862768 114862917 -88222615 - L1ME3A LINE L1 -860 5286 5129 1628 158 34 20 chr5 114864642 114864934 -88220598 + AluJo SINE Alu 1 296 -16 297 331 0 65 chr5 114866369 114866493 -88219039 - MIR3 SINE MIR -18 190 75 22 99 0 0 chr5 114866598 114866669 -88218863 + AT_rich Low_complexity Low_complexity 1 71 0 212 143 0 0 chr5 114867386 114867421 -88218111 + (CATA)n Simple_repeat Simple_repeat 2 36 0 204 125 0 0 chr5 114867862 114867894 -88217638 + (GA)n Simple_repeat Simple_repeat 1 32 0 286 299 191 20 chr5 114870014 114870161 -88215371 - MIR SINE MIR -71 191 20 337 293 98 96 chr5 114870306 114870838 -88214694 + L2 LINE L2 2262 2794 -520 21 57 0 0 chr5 114871004 114871039 -88214493 + AT_rich Low_complexity Low_complexity 1 35 0 347 279 51 44 chr5 114871104 114871262 -88214270 - MIR SINE MIR -102 160 2 35 63 0 0 chr5 114872280 114872343 -88213189 + AT_rich Low_complexity Low_complexity 1 63 0 381 220 80 0 chr5 114875207 114875307 -88210225 - MER113 DNA MER1_type? -407 114 7 308 319 60 9 chr5 114875320 114875436 -88210096 - L2 LINE L2 -1 3312 3191 261 328 99 23 chr5 114876319 114876450 -88209082 + MER5A DNA MER1_type 49 189 0 255 232 101 0 chr5 114876776 114876845 -88208687 + MIR3 SINE MIR 91 166 -42 2107 126 0 0 chr5 114877082 114877391 -88208141 + AluSx SINE Alu 3 311 -1 2197 71 4 0 chr5 114878227 114878508 -88207024 + AluY SINE Alu 1 282 -29 870 107 0 0 chr5 114878508 114878667 -88206865 + (TA)n Simple_repeat Simple_repeat 2 160 0 180 0 0 0 chr5 114878666 114878686 -88206846 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 2409 299 52 41 chr5 114879426 114880494 -88205038 - L2 LINE L2 -525 2789 1710 242 261 108 23 chr5 114880661 114880791 -88204741 - L2 LINE L2 -1897 1417 1277 23 68 0 0 chr5 114880904 114880948 -88204584 + AT_rich Low_complexity Low_complexity 1 44 0 310 261 15 0 chr5 114881485 114881550 -88203982 - L2 LINE L2 0 3313 3248 1582 147 87 76 chr5 114881659 114881913 -88203619 - THE1C LTR MaLR -1 374 113 7631 90 4 18 chr5 114881913 114882999 -88202533 - MER11C LTR ERVK 0 1071 1 1582 147 87 76 chr5 114882999 114883112 -88202420 - THE1C LTR MaLR -262 113 3 206 270 122 14 chr5 114883207 114883281 -88202251 + MIR3 SINE MIR 113 194 -14 335 346 98 13 chr5 114883483 114883636 -88201896 - MIR SINE MIR -82 180 15 3997 158 14 12 chr5 114883747 114884467 -88201065 - L1MA6 LINE L1 -23 6277 5557 253 297 11 0 chr5 114885436 114885527 -88200005 + (TA)n Simple_repeat Simple_repeat 1 92 0 24 0 0 0 chr5 114886150 114886174 -88199358 + AT_rich Low_complexity Low_complexity 1 24 0 40 87 0 0 chr5 114886509 114886612 -88198920 + AT_rich Low_complexity Low_complexity 1 103 0 419 248 231 76 chr5 114886853 114887143 -88198389 + MER102b DNA MER1_type 4 338 -3 21 0 0 0 chr5 114890417 114890438 -88195094 + AT_rich Low_complexity Low_complexity 1 21 0 1243 288 33 40 chr5 114891497 114891977 -88193555 + L2 LINE L2 2837 3313 0 180 0 0 0 chr5 114892029 114892049 -88193483 + (CAA)n Simple_repeat Simple_repeat 2 21 0 301 218 0 109 chr5 114892440 114892541 -88192991 - Charlie8 DNA MER1_type -1 2416 251 180 304 0 0 chr5 114893182 114893228 -88192304 - L2 LINE L2 -39 3233 3188 1480 217 22 32 chr5 114893500 114893869 -88191663 - MLT1A1 LTR MaLR 0 365 1 360 352 68 38 chr5 114894046 114894282 -88191250 + L3 LINE CR1 1323 1565 -12 1827 157 17 3 chr5 114894905 114895205 -88190327 - AluJo SINE Alu -8 304 1 31 0 0 0 chr5 114895243 114895274 -88190258 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 114895544 114895564 -88189968 + (TTG)n Simple_repeat Simple_repeat 2 21 0 459 305 124 27 chr5 114897956 114898581 -88186951 - L1MEd LINE L1 -833 1657 895 686 317 64 21 chr5 114899582 114899910 -88185622 + LTR33 LTR ERVL 7 348 -173 331 241 37 19 chr5 114899948 114900056 -88185476 + LTR33 LTR ERVL 410 519 -2 1087 214 131 31 chr5 114900133 114900516 -88185016 - MER110A LTR ERV1 0 468 48 646 270 46 10 chr5 114901638 114901834 -88183698 - MER63A DNA MER1_type -4 206 4 255 133 0 0 chr5 114902597 114902642 -88182890 + (GA)n Simple_repeat Simple_repeat 2 46 0 952 215 11 95 chr5 114902678 114902962 -88182570 - MIR SINE MIR -1 261 2 26 50 0 0 chr5 114903714 114903754 -88181778 + AT_rich Low_complexity Low_complexity 1 40 0 30 0 0 0 chr5 114906862 114906892 -88178640 + AT_rich Low_complexity Low_complexity 1 30 0 1244 189 16 8 chr5 114906892 114907136 -88178396 - L1PB3 LINE L1 -3 6151 5906 190 309 99 12 chr5 114907208 114907289 -88178243 - L2 LINE L2 -2 3270 3183 1018 107 11 48 chr5 114907639 114907826 -88177706 + Tigger1 DNA MER2_type 2163 2342 -76 308 297 77 45 chr5 114908045 114908200 -88177332 - L2 LINE L2 -3 3269 3110 7952 145 22 1 chr5 114908344 114909692 -88175840 - L1 LINE L1 -1195 4951 3576 212 330 38 28 chr5 114909726 114909832 -88175700 - MIR SINE MIR -108 154 48 283 310 64 18 chr5 114909869 114910040 -88175492 - MLT1L LTR MaLR 0 615 437 790 325 70 24 chr5 114911198 114911613 -88173919 - LTR16B LTR ERVL -4 460 27 342 278 57 72 chr5 114911694 114911957 -88173575 + L1MB7 LINE L1 4415 4673 -1473 249 341 11 0 chr5 114912464 114912552 -88172980 + CT-rich Low_complexity Low_complexity 1 89 0 22 35 0 0 chr5 114913496 114913525 -88172007 + AT_rich Low_complexity Low_complexity 1 29 0 4445 176 28 11 chr5 114914004 114914896 -88170636 + L1MB7 LINE L1 5278 6184 0 1727 149 18 7 chr5 114915467 114915748 -88169784 - AluJb SINE Alu -8 304 21 461 138 0 0 chr5 114915753 114915818 -88169714 + FLAM SINE Alu 59 123 -20 227 281 42 31 chr5 114916188 114916284 -88169248 + L3b LINE CR1 1308 1404 -179 251 331 91 40 chr5 114916516 114916691 -88168841 - MIR SINE MIR -36 226 43 195 246 0 0 chr5 114917412 114917469 -88168063 + CT-rich Low_complexity Low_complexity 3 59 0 397 307 133 5 chr5 114919916 114920134 -88165398 + HAL1 LINE L1 1392 1637 -870 1445 304 91 9 chr5 114920380 114920939 -88164593 + L1M3d LINE L1 2 512 -5379 * 4992 185 19 0 chr5 114920935 114921908 -88163624 + L1MB1 LINE L1 4171 5161 -985 4346 196 33 2 chr5 114921925 114922812 -88162720 + L1MB1 LINE L1 5254 6167 -1 630 293 95 60 chr5 114922913 114924125 -88161407 + L1ME LINE L1 2686 3939 -2207 309 324 95 28 chr5 114924361 114924868 -88160664 + L1ME LINE L1 4487 5027 -1119 308 337 109 58 chr5 114924899 114925276 -88160256 + L1ME LINE L1 5397 5792 -372 228 135 0 0 chr5 114925414 114925451 -88160081 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 943 143 6 16 chr5 114925463 114925645 -88159887 + GA-rich Low_complexity Low_complexity 1 180 0 1983 80 0 4 chr5 114926991 114927241 -88158291 - AluSx SINE Alu -6 306 58 298 275 208 0 chr5 114928144 114928264 -88157268 + MER5A DNA MER1_type 42 186 -3 430 305 20 50 chr5 114929903 114930103 -88155429 + MIR3 SINE MIR 2 195 -13 459 311 19 31 chr5 114930861 114931022 -88154510 - MER5B DNA MER1_type 0 178 20 408 222 97 56 chr5 114931024 114931095 -88154437 + Charlie8 DNA MER1_type 10 77 -264 2115 89 0 0 chr5 114931095 114931380 -88154152 - AluSx SINE Alu 0 310 26 408 222 97 56 chr5 114931380 114931451 -88154081 + Charlie8 DNA MER1_type 77 159 -182 315 161 0 0 chr5 114931677 114931733 -88153799 + (CA)n Simple_repeat Simple_repeat 2 57 0 227 316 57 68 chr5 114932057 114932234 -88153298 - MER5B DNA MER1_type 0 178 4 1924 132 7 4 chr5 114932406 114932718 -88152814 + AluSx SINE Alu 1 313 0 195 184 0 0 chr5 114932726 114932764 -88152768 + (TA)n Simple_repeat Simple_repeat 2 39 0 265 275 38 0 chr5 114932860 114932940 -88152592 + Charlie8 DNA MER1_type 15 97 -2320 243 0 0 0 chr5 114933255 114933282 -88152250 + (TGG)n Simple_repeat Simple_repeat 3 29 0 2192 137 0 0 chr5 114933283 114933583 -88151949 - AluSx SINE Alu -12 300 1 676 236 74 10 chr5 114933833 114934036 -88151496 - L2 LINE L2 0 3313 3098 303 240 167 55 chr5 114934038 114934275 -88151257 - LTR41 LTR ERVL 0 795 512 531 281 157 22 chr5 114934696 114934881 -88150651 - LTR41 LTR ERVL -583 212 3 1006 310 61 37 chr5 114934974 114935462 -88150070 - L2 LINE L2 -270 3002 2489 1924 181 17 15 chr5 114935467 114935839 -88149693 - MLT1A1 LTR MaLR 0 365 1 677 300 107 61 chr5 114936072 114936532 -88149000 - L2 LINE L2 -1089 2225 1745 308 200 67 11 chr5 114936541 114936631 -88148901 - L1M4b LINE L1 -4118 3628 3534 283 244 39 32 chr5 114936977 114937121 -88148411 - L1M1 LINE L1 -4561 3004 2820 246 326 11 0 chr5 114937369 114937464 -88148068 - L1M4b LINE L1 -5329 2138 2043 183 281 26 104 chr5 114937882 114938074 -88147458 - L2 LINE L2 -1559 1755 1579 653 309 90 20 chr5 114938904 114939250 -88146282 - L2 LINE L2 -984 2330 1961 329 227 0 0 chr5 114939665 114939740 -88145792 + MIR SINE MIR 160 234 -28 254 324 171 36 chr5 114940964 114941273 -88144259 - L2 LINE L2 0 3313 2963 299 301 55 32 chr5 114941632 114941785 -88143747 + MER5A DNA MER1_type 1 184 -5 425 158 0 0 chr5 114943899 114943975 -88141557 - L1PA8 LINE L1 0 6172 6097 450 65 0 0 chr5 114943976 114944038 -88141494 + L1PA8A LINE L1 6002 6063 -68 331 333 106 34 chr5 114944537 114944915 -88140617 - L2 LINE L2 -338 2976 2572 992 256 42 50 chr5 114945080 114945403 -88140129 + Charlie4a DNA MER1_type 3 324 -1637 2205 102 0 30 chr5 114945403 114945708 -88139824 + AluSg SINE Alu 1 296 -14 992 256 42 50 chr5 114945708 114945787 -88139745 + Charlie4a DNA MER1_type 324 402 -106 21 0 0 0 chr5 114946037 114946058 -88139474 + AT_rich Low_complexity Low_complexity 1 21 0 1461 217 109 25 chr5 114947742 114948625 -88136907 - Charlie7 DNA MER1_type 0 2612 1605 189 0 0 0 chr5 114948625 114948646 -88136886 + (TTA)n Simple_repeat Simple_repeat 1 21 0 1461 217 109 25 chr5 114948646 114948777 -88136755 - Charlie7 DNA MER1_type -1007 1605 1486 642 239 89 43 chr5 114948785 114949065 -88136467 - Charlie7 DNA MER1_type -2256 356 64 21 0 0 0 chr5 114949555 114949576 -88135956 + AT_rich Low_complexity Low_complexity 1 21 0 187 283 50 17 chr5 114949962 114950022 -88135510 + MIR SINE MIR 47 108 -154 463 318 68 6 chr5 114950297 114950473 -88135059 - L2 LINE L2 -5 3308 3122 994 200 79 9 chr5 114950534 114950749 -88134783 + MLT1D LTR MaLR 276 505 0 301 343 44 28 chr5 114950753 114950934 -88134598 - L2 LINE L2 -625 2689 2506 313 315 206 26 chr5 114952994 114953305 -88132227 - L2 LINE L2 -36 3277 2911 643 247 142 46 chr5 114953752 114953971 -88131561 - MER45C DNA AcHobo -1 952 713 379 286 216 5 chr5 114954005 114954238 -88131294 - MER45C DNA AcHobo -654 299 1 606 183 0 9 chr5 114954336 114954451 -88131081 + L1MD2 LINE L1 6229 6342 -17 258 291 0 0 chr5 114954486 114954541 -88130991 + G-rich Low_complexity Low_complexity 2 56 0 5617 76 15 17 chr5 114954929 114955736 -88129796 - L1MA2 LINE L1 0 6304 5500 212 393 0 0 chr5 114955931 114956038 -88129494 + MIR SINE MIR 156 262 0 200 376 30 0 chr5 114956857 114956958 -88128574 + MIR SINE MIR 49 152 -110 401 274 60 0 chr5 114957061 114957178 -88128354 + MIR SINE MIR 46 169 -93 835 132 63 0 chr5 114957849 114958008 -88127524 + L1MA8 LINE L1 6116 6284 -7 4549 145 66 10 chr5 114958020 114958839 -88126693 + L1MB3 LINE L1 5309 6173 -10 22 0 0 0 chr5 114958839 114958861 -88126671 + AT_rich Low_complexity Low_complexity 1 22 0 361 277 181 36 chr5 114958961 114959127 -88126405 + MIR SINE MIR 40 229 -33 495 48 0 0 chr5 114959684 114959746 -88125786 + (TG)n Simple_repeat Simple_repeat 2 63 0 428 213 0 12 chr5 114959765 114959845 -88125687 - Tigger2 DNA MER2_type -17 2701 2623 353 138 0 0 chr5 114959846 114959904 -88125628 + Tigger2 DNA MER2_type 2 59 -2659 234 170 0 21 chr5 114959903 114959950 -88125582 + Tigger2 DNA MER2_type 415 460 -2258 * 817 160 8 8 chr5 114959947 114960078 -88125454 + Tigger2 DNA MER2_type 2577 2707 -11 365 135 0 0 chr5 114960163 114960215 -88125317 + MER8 DNA MER2_type 188 239 0 879 136 6 71 chr5 114960283 114960452 -88125080 - MLT2D LTR ERVL -178 236 79 1291 148 40 0 chr5 114960452 114960702 -88124830 + L1MA4A LINE L1 6044 6303 0 448 157 0 0 chr5 114960807 114960877 -88124655 - MLT2D LTR ERVL -327 87 18 476 138 0 46 chr5 114961071 114961158 -88124374 - LTR41 LTR ERVL -671 102 20 194 297 189 27 chr5 114961211 114961359 -88124173 - L2 LINE L2 -635 2679 2508 222 252 261 9 chr5 114962309 114962424 -88123108 - MIR SINE MIR -10 252 109 559 237 179 48 chr5 114962581 114962788 -88122744 - MIR SINE MIR 0 262 29 250 246 0 0 chr5 114963620 114963681 -88121851 + (CATA)n Simple_repeat Simple_repeat 1 61 0 248 326 86 11 chr5 114965936 114966100 -88119432 + MIR SINE MIR 16 192 -70 239 288 0 27 chr5 114966236 114966309 -88119223 + Charlie4 DNA MER1_type 1886 1956 -5 2903 256 19 8 chr5 114966583 114967379 -88118153 + L1MB8 LINE L1 5341 6145 -33 480 247 60 7 chr5 114967543 114967693 -88117839 + MIR SINE MIR 104 261 -1 1744 111 8 0 chr5 114967823 114968101 -88117431 + AluSg SINE Alu 44 323 0 243 329 101 38 chr5 114969353 114969590 -88115942 - L2 LINE L2 -4 3309 3058 434 284 107 25 chr5 114972465 114972662 -88112870 - MIR SINE MIR -34 228 16 2180 152 54 0 chr5 114972797 114973166 -88112366 - MSTB1 LTR MaLR -43 389 1 276 186 0 17 chr5 114973166 114973225 -88112307 - MLT-int LTR MaLR 0 1735 1678 628 128 10 10 chr5 114973228 114973330 -88112202 - MSTB1 LTR MaLR -330 102 1 460 233 41 41 chr5 114973378 114973524 -88112008 + MIR SINE MIR 71 216 -46 203 202 34 22 chr5 114973548 114973637 -88111895 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 26 0 0 0 chr5 114973653 114973679 -88111853 + AT_rich Low_complexity Low_complexity 1 26 0 803 286 14 9 chr5 114974538 114974751 -88110781 - MIR SINE MIR -12 250 37 5890 214 46 31 chr5 114975612 114978036 -88107496 + L1M2 LINE L1 1258 3831 -3017 948 180 26 5 chr5 114978040 114978229 -88107303 - L1M2 LINE L1 -6655 194 2 439 323 78 17 chr5 114978912 114979144 -88106388 - MIR SINE MIR -10 252 7 21 36 0 0 chr5 114980062 114980090 -88105442 + AT_rich Low_complexity Low_complexity 1 28 0 711 226 0 0 chr5 114981099 114981232 -88104300 + FLAM_A SINE Alu 1 133 0 1456 166 41 3 chr5 114981312 114981602 -88103930 + L1MB7 LINE L1 5629 5929 -249 2459 145 9 2 chr5 114981604 114982024 -88103508 - MER52C LTR ERV1 -855 423 1 918 147 6 0 chr5 114982025 114982181 -88103351 + L1MB7 LINE L1 6020 6176 -8 448 293 41 24 chr5 114983299 114983422 -88102110 + MIR3 SINE MIR 34 158 -50 22 0 0 0 chr5 114983942 114983964 -88101568 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 114985327 114985348 -88100184 + AT_rich Low_complexity Low_complexity 1 21 0 2245 101 0 0 chr5 114986099 114986387 -88099145 - AluY SINE Alu -23 288 1 281 291 137 44 chr5 114986806 114986988 -88098544 - MIR3 SINE MIR -3 205 7 2181 121 0 10 chr5 114987792 114988097 -88097435 + AluSg SINE Alu 1 302 -8 657 292 41 0 chr5 114988555 114988750 -88096782 + MIR SINE MIR 25 227 -35 215 378 82 0 chr5 114989849 114989947 -88095585 + L2 LINE L2 3162 3267 -5 837 65 122 0 chr5 114990285 114990408 -88095124 + MER85 DNA T2_type 2 139 0 589 214 63 0 chr5 114990817 114990943 -88094589 + MER94 DNA DNA 1 134 0 22 0 0 0 chr5 114991230 114991252 -88094280 + AT_rich Low_complexity Low_complexity 1 22 0 560 208 0 9 chr5 114991356 114991462 -88094070 - LTR40a LTR ERVL -38 481 377 258 312 26 0 chr5 114991499 114991576 -88093956 + MIR SINE MIR 60 138 -70 380 332 183 11 chr5 114993386 114993648 -88091884 - L2 LINE L2 -2922 392 86 1287 181 77 0 chr5 114995779 114996078 -88089454 + MER33 DNA MER1_type 3 324 0 242 315 55 0 chr5 114996602 114996675 -88088857 + LTR67 LTR ERVL 114 190 -367 330 303 91 8 chr5 114996868 114997000 -88088532 + MIR SINE MIR 120 262 0 274 250 36 36 chr5 114997454 114997538 -88087994 - L2 LINE L2 -4 3309 3226 1842 214 166 5 chr5 114997847 114998418 -88087114 - L1MC4 LINE L1 -142 7900 7238 1496 190 11 0 chr5 114998424 114998698 -88086834 - L1MC4 LINE L1 -968 7074 6798 358 229 165 9 chr5 114998710 114998819 -88086713 + LTR16A LTR ERVL 94 219 -231 357 259 122 15 chr5 114998850 114998981 -88086551 - L1MC3 LINE L1 -1053 6732 6588 1783 198 87 47 chr5 114998984 114999469 -88086063 + MLT1D LTR MaLR 2 505 0 227 341 63 16 chr5 114999795 114999921 -88085611 + HAL1 LINE L1 385 516 -1991 504 249 144 78 chr5 115000209 115000703 -88084829 + HAL1 LINE L1 896 1435 -1072 2139 116 0 3 chr5 115000703 115001004 -88084528 + AluSx SINE Alu 1 300 -12 504 249 144 78 chr5 115001004 115001084 -88084448 + HAL1 LINE L1 1435 1508 -999 325 234 47 28 chr5 115001088 115001195 -88084337 + HAL1 LINE L1 1578 1686 -821 252 322 33 0 chr5 115001409 115001530 -88084002 - MLT1J1 LTR MaLR -295 151 27 423 250 179 84 chr5 115001561 115002153 -88083379 + HAL1 LINE L1 1685 2332 -175 21 0 0 0 chr5 115004470 115004491 -88081041 + AT_rich Low_complexity Low_complexity 1 21 0 230 211 35 0 chr5 115004837 115004894 -88080638 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 182 114 0 29 chr5 115004981 115005016 -88080516 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 1371 207 47 13 chr5 115007627 115007927 -88077605 + MLT1E2 LTR MaLR 2 311 -315 286 234 0 0 chr5 115007929 115007993 -88077539 + LTR16B LTR ERVL 305 368 -96 1336 214 80 0 chr5 115008008 115008284 -88077248 + MLT1E2 LTR MaLR 322 619 -7 1057 292 120 15 chr5 115008506 115008897 -88076635 + LTR16A LTR ERVL 9 440 -10 598 305 31 57 chr5 115008985 115009339 -88076193 + L1MEd LINE L1 451 795 -5735 350 258 161 16 chr5 115009647 115009833 -88075699 + L1MEd LINE L1 1206 1418 -5122 1026 259 58 35 chr5 115009855 115010274 -88075258 + LTR16B LTR ERVL 1 464 0 1891 167 0 23 chr5 115010775 115011081 -88074451 + AluSx SINE Alu 1 299 -13 345 303 107 31 chr5 115011081 115011820 -88073712 + L1MEd LINE L1 2719 3513 -3027 269 313 54 27 chr5 115011821 115011933 -88073599 - L2 LINE L2 -196 3117 3003 526 258 47 56 chr5 115012606 115012839 -88072693 + L2 LINE L2 3082 3312 -1 359 299 37 30 chr5 115013891 115014025 -88071507 + L2 LINE L2 3179 3313 0 2325 240 78 16 chr5 115014074 115014757 -88070775 - MER21B LTR ERV1 -1 862 138 436 157 20 88 chr5 115014847 115014949 -88070583 - MER21B LTR ERV1 -757 106 12 579 327 99 14 chr5 115015077 115015441 -88070091 + LTR16C LTR ERVL 88 482 -9 2862 142 12 88 chr5 115015890 115016490 -88069042 - MLT2B3 LTR ERVL 0 554 1 1791 143 0 31 chr5 115020294 115020580 -88064952 - AluJb SINE Alu -15 297 21 206 342 139 0 chr5 115020840 115020919 -88064613 - MIR SINE MIR -114 148 59 420 55 0 0 chr5 115021902 115021957 -88063575 + (CA)n Simple_repeat Simple_repeat 2 56 0 234 0 0 0 chr5 115022825 115022851 -88062681 + (A)n Simple_repeat Simple_repeat 1 26 0 540 290 141 16 chr5 115023052 115023307 -88062225 - L2 LINE L2 -17 3296 3010 274 287 133 9 chr5 115023526 115023699 -88061833 + MIR SINE MIR 51 252 -10 482 234 114 29 chr5 115023763 115023938 -88061594 - MIR SINE MIR -66 196 7 1405 210 31 10 chr5 115024639 115024929 -88060603 + AluJo SINE Alu 1 296 -16 465 237 0 0 chr5 115024938 115025031 -88060501 - L2 LINE L2 0 3313 3221 287 113 19 0 chr5 115025902 115025955 -88059577 + GA-rich Low_complexity Low_complexity 2 55 0 382 185 74 0 chr5 115027520 115027601 -88057931 + Charlie1 DNA MER1_type 2675 2761 0 202 329 19 71 chr5 115027623 115027833 -88057699 - L2 LINE L2 -1914 1400 1202 5287 120 22 1 chr5 115027908 115028757 -88056775 + L1PA15 LINE L1 5287 6153 -12 337 304 91 36 chr5 115028931 115029461 -88056071 - L1MEc LINE L1 -4576 1734 1176 302 271 34 59 chr5 115029467 115029585 -88055947 - L1MEc LINE L1 -5022 1097 983 334 360 7 7 chr5 115029874 115030021 -88055511 - L1MEc LINE L1 -5449 670 524 28375 101 15 19 chr5 115030224 115033099 -88052433 + L1PA7 LINE L1 724 3565 -2904 1996 136 0 14 chr5 115033099 115033412 -88052120 + AluSg SINE Alu 1 309 0 28375 101 15 19 chr5 115033412 115036296 -88049236 + L1PA7 LINE L1 3565 6457 -12 513 250 86 0 chr5 115036351 115036491 -88049041 - L2 LINE L2 -2098 1216 1065 453 81 0 0 chr5 115036665 115036727 -88048805 + (TG)n Simple_repeat Simple_repeat 1 62 0 235 235 12 35 chr5 115036948 115037033 -88048499 - L1MEc LINE L1 -6015 104 22 386 383 130 22 chr5 115037055 115037702 -88047830 - L2 LINE L2 -2128 1186 470 438 300 59 37 chr5 115038077 115038350 -88047182 + L1MEc LINE L1 650 928 -5191 2296 85 16 13 chr5 115038362 115038669 -88046863 + AluY SINE Alu 1 308 -3 1192 171 87 6 chr5 115038669 115039013 -88046519 + L1 LINE L1 3119 3490 -2656 384 236 90 17 chr5 115039005 115039183 -88046349 + L1MEc LINE L1 1003 1193 -4926 * 355 274 90 16 chr5 115039185 115039314 -88046218 + L1MEc LINE L1 1267 1385 -1105 919 260 0 13 chr5 115039314 115039541 -88045991 - MER58A DNA MER1_type 0 224 1 355 274 90 16 chr5 115039541 115039596 -88045936 + L1MEc LINE L1 1385 1523 -967 2338 91 0 14 chr5 115042629 115042926 -88042606 + AluSq SINE Alu 1 293 -20 306 231 0 0 chr5 115042945 115043010 -88042522 - L1MC4 LINE L1 -1339 6703 6639 275 342 157 31 chr5 115043015 115043623 -88041909 - L2 LINE L2 0 3272 2586 206 118 0 0 chr5 115044570 115044604 -88040928 + (A)n Simple_repeat Simple_repeat 1 34 0 271 376 94 0 chr5 115044713 115044883 -88040649 + L2 LINE L2 3087 3272 0 4021 239 65 59 chr5 115045558 115045778 -88039754 + L1M4b LINE L1 11 228 -6731 1014 157 0 0 chr5 115045778 115045956 -88039576 + (TA)n Simple_repeat Simple_repeat 1 178 0 297 0 0 0 chr5 115045955 115045988 -88039544 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 4021 239 65 59 chr5 115045956 115047978 -88037554 + L1M4b LINE L1 228 2234 -4725 2007 167 16 8 chr5 115047978 115048350 -88037182 - THE1C LTR MaLR 0 375 1 4021 239 65 59 chr5 115048350 115048505 -88037027 + L1M4b LINE L1 2234 2387 -4572 3333 114 40 95 chr5 115048597 115049247 -88036285 + LTR18B LTR ERVL 1 614 0 2079 120 3 0 chr5 115049335 115049641 -88035891 + AluSx SINE Alu 1 307 0 239 291 8 39 chr5 115049751 115049878 -88035654 + L1M4b LINE L1 2597 2719 -4240 1210 189 86 44 chr5 115049908 115050247 -88035285 + MLT1A1 LTR MaLR 1 353 -12 208 210 32 0 chr5 115050280 115050342 -88035190 + (TA)n Simple_repeat Simple_repeat 2 65 0 923 203 40 0 chr5 115050663 115050840 -88034692 - MER5A DNA MER1_type -5 184 1 833 279 117 26 chr5 115050990 115051417 -88034115 + MLT1K LTR MaLR 12 477 -111 1197 262 30 102 chr5 115051830 115052404 -88033128 + L2 LINE L2 2784 3313 0 734 200 68 5 chr5 115052932 115053137 -88032395 - MER63 DNA MER1_type -78 982 765 2616 69 6 3 chr5 115053145 115053494 -88032038 + L1PA7 LINE L1 5805 6154 0 1483 189 76 40 chr5 115054577 115054974 -88030558 + MLT2D LTR ERVL 1 411 -3 379 283 61 40 chr5 115054975 115055173 -88030359 - MIR SINE MIR -2 260 59 26 0 0 0 chr5 115055195 115055221 -88030311 + AT_rich Low_complexity Low_complexity 1 26 0 507 274 149 27 chr5 115055274 115055602 -88029930 + MLT1J2 LTR MaLR 67 434 -16 265 315 99 72 chr5 115055697 115055878 -88029654 + MIR SINE MIR 23 208 -54 290 272 110 35 chr5 115056478 115056655 -88028877 + MIR3 SINE MIR 6 191 -67 413 332 11 47 chr5 115056723 115056913 -88028619 - MER5A DNA MER1_type -6 183 1 216 135 0 0 chr5 115057693 115057730 -88027802 + (TG)n Simple_repeat Simple_repeat 1 37 0 395 242 8 65 chr5 115058760 115058884 -88026648 + MIR SINE MIR 57 173 -89 226 294 15 0 chr5 115058890 115058958 -88026574 + (TATG)n Simple_repeat Simple_repeat 2 70 0 216 304 0 29 chr5 115058958 115059027 -88026505 + MIR SINE MIR 196 262 0 22 0 0 0 chr5 115059034 115059056 -88026476 + AT_rich Low_complexity Low_complexity 1 22 0 30241 47 2 2 chr5 115259922 115263700 -87821832 - L1P LINE L1 -2370 3776 1 183 284 54 68 chr5 115264278 115264352 -87821180 + MIR SINE MIR 169 241 -21 22 0 0 0 chr5 115264635 115264657 -87820875 + AT_rich Low_complexity Low_complexity 1 22 0 288 29 0 0 chr5 115265315 115265349 -87820183 + MER57A LTR ERV1 1 34 -369 * 635 162 17 17 chr5 115265341 115265458 -87820074 + MER57B LTR ERV1 318 434 0 212 337 122 17 chr5 115266133 115266305 -87819227 - MIR SINE MIR -71 191 2 328 299 0 30 chr5 115266937 115267101 -87818431 + (CATATA)n Simple_repeat Simple_repeat 3 161 0 267 79 0 0 chr5 115267102 115267140 -87818392 + (CA)n Simple_repeat Simple_repeat 1 38 0 267 284 0 14 chr5 115267346 115267420 -87818112 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 426 285 13 139 chr5 115267425 115267727 -87817805 - MLT2B1 LTR ERVL -72 448 181 724 290 37 37 chr5 115267817 115268249 -87817283 + MLT1H LTR MaLR 3 549 0 1808 141 30 69 chr5 115268614 115268948 -87816584 + MER1B DNA MER1_type 19 339 0 238 273 0 13 chr5 115270340 115270417 -87815115 + LTR33A LTR ERVL 446 521 -2 310 343 75 33 chr5 115270461 115270674 -87814858 - L2 LINE L2 -453 2861 2640 7599 205 28 14 chr5 115271362 115273514 -87812018 + L1PA16 LINE L1 3576 5756 -410 2784 154 109 25 chr5 115273514 115274080 -87811452 - LTR18B LTR ERVL 0 614 1 7599 205 28 14 chr5 115274080 115274245 -87811287 + L1PA16 LINE L1 5756 5917 -249 220 353 49 16 chr5 115274464 115274586 -87810946 + MER5B DNA MER1_type 12 137 -41 1365 174 113 82 chr5 115275035 115275248 -87810284 + MSTA LTR MaLR 1 206 -222 258 32 0 0 chr5 115275248 115275279 -87810253 + (TC)n Simple_repeat Simple_repeat 1 31 0 1365 174 113 82 chr5 115275279 115275480 -87810052 + MSTA LTR MaLR 206 428 0 7440 158 33 63 chr5 115275484 115277108 -87808424 + MSTA-int LTR MaLR 5 1580 0 1172 193 210 10 chr5 115277115 115277415 -87808117 + MSTA LTR MaLR 8 367 -61 2166 111 0 3 chr5 115277907 115278204 -87807328 - AluSq SINE Alu -17 296 1 243 380 62 16 chr5 115278266 115278524 -87807008 + L2 LINE L2 2200 2469 -845 200 430 0 7 chr5 115278753 115278888 -87806644 + L2 LINE L2 2946 3079 -193 1606 246 59 24 chr5 115279141 115279650 -87805882 + MER90 LTR ERV1 7 533 -81 225 0 0 0 chr5 115279746 115279771 -87805761 + (CA)n Simple_repeat Simple_repeat 2 26 0 252 302 35 12 chr5 115279875 115279961 -87805571 - MIR SINE MIR -51 211 124 200 333 88 20 chr5 115280598 115280700 -87804832 + L2 LINE L2 3190 3298 -15 800 217 145 59 chr5 115280922 115281356 -87804176 + MER39 LTR ERV1 20 593 -114 237 258 56 34 chr5 115281360 115281449 -87804083 + MER34C LTR ERV1 495 585 0 211 343 45 0 chr5 115282401 115282468 -87803064 + L2 LINE L2 3221 3290 -23 25 0 0 0 chr5 115282787 115282812 -87802720 + AT_rich Low_complexity Low_complexity 1 25 0 303 384 171 11 chr5 115283102 115283459 -87802073 - L2 LINE L2 -348 2966 2553 1285 259 70 30 chr5 115283591 115284152 -87801380 + MER69 DNA AcHobo 1916 2498 -28 673 193 33 20 chr5 115285891 115286041 -87799491 + MLT1E2 LTR MaLR 1 152 -315 3421 224 77 50 chr5 115286070 115286366 -87799166 + MLT1C-int LTR MaLR 23 310 -1061 1808 179 0 0 chr5 115286366 115286651 -87798881 - AluJb SINE Alu -25 287 3 3421 224 77 50 chr5 115286651 115287261 -87798271 + MLT1C-int LTR MaLR 310 1090 -281 2012 134 0 10 chr5 115287261 115287560 -87797972 + AluSx SINE Alu 1 296 -16 3421 224 77 50 chr5 115287560 115287837 -87797695 + MLT1C-int LTR MaLR 1090 1358 -13 1745 243 38 7 chr5 115287914 115288333 -87797199 + MLT1C LTR MaLR 36 467 0 220 369 91 16 chr5 115292677 115292929 -87792603 + L3 LINE CR1 1300 1570 -7 260 319 18 9 chr5 115293482 115293595 -87791937 + L1ME LINE L1 5546 5659 -511 * 1900 218 79 9 chr5 115293584 115294241 -87791291 + L1MCb LINE L1 754 1455 -4853 28 29 0 0 chr5 115297120 115297155 -87788377 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 115297413 115297438 -87788094 + AT_rich Low_complexity Low_complexity 1 25 0 361 85 0 0 chr5 115298274 115298321 -87787211 + Alu SINE Alu 248 294 -8 210 167 0 0 chr5 115298322 115298358 -87787174 + (TA)n Simple_repeat Simple_repeat 2 37 0 772 223 0 13 chr5 115298644 115298821 -87786711 - FRAM SINE Alu 0 166 1 5502 113 12 6 chr5 115299093 115300527 -87785005 - L1PA14 LINE L1 0 6161 4724 362 222 33 11 chr5 115300570 115300660 -87784872 - MLT1C LTR MaLR -32 435 344 1293 273 61 25 chr5 115300740 115301184 -87784348 + MLT1E2 LTR MaLR 137 596 -30 1189 263 30 76 chr5 115301252 115301815 -87783717 + MLT1E2-int LTR MaLR 15 551 -820 245 391 17 0 chr5 115302037 115302152 -87783380 + MLT1E2-int LTR MaLR 692 808 -563 435 174 0 0 chr5 115302189 115302258 -87783274 + AluSg/x SINE Alu 217 285 -27 21 0 0 0 chr5 115302338 115302359 -87783173 + AT_rich Low_complexity Low_complexity 1 21 0 308 233 61 110 chr5 115302418 115302581 -87782951 + MLT1E2-int LTR MaLR 942 1096 -275 317 284 47 8 chr5 115302796 115302923 -87782609 + MLT1E2-int LTR MaLR 1240 1371 0 1022 291 155 5 chr5 115303048 115303494 -87782038 + MLT1E2 LTR MaLR 111 623 -3 291 224 144 32 chr5 115303499 115303624 -87781908 - L1M4 LINE L1 -964 5182 5044 871 127 61 12 chr5 115303717 115303882 -87781650 + L1MC3 LINE L1 5752 5924 -1861 24 53 0 0 chr5 115304191 115304229 -87781303 + AT_rich Low_complexity Low_complexity 1 38 0 1810 140 21 0 chr5 115305846 115306131 -87779401 - AluSx SINE Alu -10 302 12 2102 102 7 7 chr5 115306347 115306640 -87778892 - AluSg SINE Alu -9 301 9 2395 54 0 3 chr5 115306830 115307124 -87778408 + AluY SINE Alu 1 293 -18 27 62 0 0 chr5 115307588 115307636 -87777896 + AT_rich Low_complexity Low_complexity 1 48 0 871 253 69 0 chr5 115307806 115308039 -87777493 + L1MCc LINE L1 966 1214 -5209 * 963 297 88 37 chr5 115308031 115308981 -87776551 + L1MCc LINE L1 1587 2753 -4369 568 247 161 7 chr5 115308982 115309274 -87776258 - L1ME LINE L1 -457 5713 5377 645 305 57 3 chr5 115309383 115309750 -87775782 - L1ME LINE L1 -898 5248 4862 368 359 47 9 chr5 115310208 115310528 -87775004 - L1ME LINE L1 -453 5717 5386 681 224 26 0 chr5 115310580 115310732 -87774800 + AluJb SINE Alu 134 289 -23 214 189 95 0 chr5 115310892 115311040 -87774492 + (TA)n Simple_repeat Simple_repeat 1 162 0 244 143 29 0 chr5 115311052 115311122 -87774410 + (TA)n Simple_repeat Simple_repeat 1 72 0 337 266 47 90 chr5 115311431 115311709 -87773823 - L1ME LINE L1 -1460 4686 4421 1082 239 41 30 chr5 115311709 115312245 -87773287 + L1ME LINE L1 4963 5514 -652 309 271 42 72 chr5 115312263 115312499 -87773033 - Charlie7 DNA MER1_type -752 1860 1632 325 336 15 0 chr5 115312948 115313079 -87772453 - Charlie7 DNA MER1_type -1595 1017 885 453 299 122 0 chr5 115313227 115313481 -87772051 - Charlie7 DNA MER1_type -1927 685 401 619 283 85 28 chr5 115313912 115314159 -87771373 - L2 LINE L2 -52 3261 3001 1503 179 66 66 chr5 115314180 115314559 -87770973 - MSTD LTR MaLR -17 379 1 1306 324 195 12 chr5 115314577 115315507 -87770025 - L2 LINE L2 -360 2954 1855 24 32 0 0 chr5 115316959 115316990 -87768542 + AT_rich Low_complexity Low_complexity 1 31 0 231 61 0 0 chr5 115317060 115317093 -87768439 + (TC)n Simple_repeat Simple_repeat 2 34 0 1986 151 0 10 chr5 115317195 115317500 -87768032 + AluSx SINE Alu 6 307 -5 31 58 0 0 chr5 115318017 115318069 -87767463 + AT_rich Low_complexity Low_complexity 1 52 0 22 56 0 0 chr5 115319407 115319443 -87766089 + AT_rich Low_complexity Low_complexity 1 36 0 2284 112 0 0 chr5 115320431 115320743 -87764789 + AluSq SINE Alu 2 313 0 348 43 0 0 chr5 115320789 115320835 -87764697 + (TG)n Simple_repeat Simple_repeat 2 47 0 277 286 62 9 chr5 115321358 115321470 -87764062 - MER63 DNA MER1_type -271 791 674 2398 263 70 32 chr5 115321728 115322486 -87763046 + L1M2b LINE L1 16 802 -6407 16439 179 21 16 chr5 115323057 115323071 -87762461 - L1 LINE L1 -2414 5151 5139 5155 127 19 8 chr5 115323071 115323923 -87761609 - L1MA1 LINE L1 -1 6301 5441 16439 179 21 16 chr5 115323923 115325612 -87759920 - L1 LINE L1 -2426 5139 3459 1942 152 23 0 chr5 115325612 115325915 -87759617 - AluSx SINE Alu -2 310 1 16439 179 21 16 chr5 115325915 115327579 -87757953 - L1 LINE L1 -4106 3459 1756 258 32 0 0 chr5 115327579 115327610 -87757922 + (TC)n Simple_repeat Simple_repeat 2 32 0 16439 179 21 16 chr5 115327610 115328737 -87756795 - L1 LINE L1 -5809 1756 636 686 256 50 20 chr5 115328739 115328938 -87756594 - L1 LINE L1 -7130 435 231 617 282 70 19 chr5 115330108 115330438 -87755094 - L1ME3A LINE L1 -9 6155 5792 2392 112 5 35 chr5 115330443 115330818 -87754714 - THE1B LTR MaLR 0 364 1 233 321 0 12 chr5 115330995 115331076 -87754456 - L2 LINE L2 -6 3266 3187 28 0 0 0 chr5 115331761 115331789 -87753743 + AT_rich Low_complexity Low_complexity 1 28 0 8478 145 6 21 chr5 115331846 115334234 -87751298 - L1PA13 LINE L1 -4 6159 3806 5220 187 22 5 chr5 115334240 115335338 -87750194 - L1PA13 LINE L1 -2757 3389 2273 1624 113 17 0 chr5 115337312 115337542 -87747990 + AluSg/x SINE Alu 65 298 -12 459 205 162 0 chr5 115337654 115337771 -87747761 + AluJo SINE Alu 1 136 -176 207 0 0 0 chr5 115337771 115337794 -87747738 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 428 313 148 29 chr5 115337959 115338202 -87747330 + L3 LINE CR1 968 1239 -338 21 0 0 0 chr5 115338477 115338498 -87747034 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 115338746 115338774 -87746758 + AT_rich Low_complexity Low_complexity 1 28 0 829 329 38 29 chr5 115339703 115340147 -87745385 - LTR16A LTR ERVL -2 448 1 198 0 0 0 chr5 115341119 115341141 -87744391 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr5 115341544 115341580 -87743952 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 115341877 115341919 -87743613 + AT_rich Low_complexity Low_complexity 1 42 0 257 255 53 32 chr5 115342327 115342421 -87743111 - MIR SINE MIR -47 215 120 248 388 45 0 chr5 115342760 115342894 -87742638 - L2 LINE L2 -259 3054 2915 2109 79 18 0 chr5 115343311 115343590 -87741942 + AluY SINE Alu 1 284 -27 219 154 0 0 chr5 115343813 115343852 -87741680 + (CAA)n Simple_repeat Simple_repeat 2 40 0 2249 40 11 0 chr5 115343962 115344237 -87741295 + AluY SINE Alu 24 301 -10 25 99 0 0 chr5 115344719 115344800 -87740732 + AT_rich Low_complexity Low_complexity 1 81 0 493 322 109 0 chr5 115345062 115345273 -87740259 - LTR16A LTR ERVL -14 436 203 22 0 0 0 chr5 115345410 115345432 -87740100 + AT_rich Low_complexity Low_complexity 1 22 0 1404 200 11 14 chr5 115346247 115346571 -87738961 + AluJb SINE Alu 1 323 0 286 250 10 10 chr5 115346631 115346731 -87738801 + L1MD2 LINE L1 2740 2839 -3307 3513 224 34 55 chr5 115346748 115347824 -87737708 + L1MD2 LINE L1 5304 6357 -2 2178 101 0 3 chr5 115347836 115348133 -87737399 + AluSx SINE Alu 3 298 -14 200 354 15 0 chr5 115348638 115348703 -87736829 + L2 LINE L2 3245 3310 -3 2028 131 0 0 chr5 115349262 115349560 -87735972 + AluSx SINE Alu 9 306 -6 2888 158 20 8 chr5 115349667 115350332 -87735200 + L1MA8 LINE L1 5113 5787 -504 1196 199 22 4 chr5 115350332 115350563 -87734969 + Tigger4(Zombi) DNA MER2_type 1 235 -2496 * 3486 154 12 2 chr5 115350558 115351136 -87734396 + Tigger4(Zombi) DNA MER2_type 2148 2731 0 2110 192 56 23 chr5 115351136 115351621 -87733911 + L1MA8 LINE L1 5786 6286 -5 22 0 0 0 chr5 115352058 115352080 -87733452 + AT_rich Low_complexity Low_complexity 1 22 0 502 202 53 0 chr5 115352439 115352553 -87732979 + L1MA9 LINE L1 6147 6266 -46 1770 217 87 27 chr5 115352553 115353070 -87732462 + LTR10A LTR ERV1 1 548 -61 243 0 0 0 chr5 115353501 115353528 -87732004 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 683 151 26 40 chr5 115353538 115353690 -87731842 - L1MC2 LINE L1 -15 6329 6180 2075 119 3 3 chr5 115353695 115353990 -87731542 - AluSq SINE Alu -16 297 3 668 163 41 0 chr5 115353993 115354116 -87731416 + MLT2B1 LTR ERVL 1 128 -392 1366 233 42 0 chr5 115354126 115354598 -87730934 - L1MC/D LINE L1 -743 5403 5008 229 317 0 0 chr5 115354599 115354659 -87730873 + MIR SINE MIR 88 147 -115 222 333 67 29 chr5 115355099 115355204 -87730328 - L2 LINE L2 -13 3259 3151 258 235 15 0 chr5 115356294 115356362 -87729170 + (TA)n Simple_repeat Simple_repeat 1 69 0 22 70 0 0 chr5 115356385 115356428 -87729104 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 30 chr5 115356697 115356714 -87728818 + AT_rich Low_complexity Low_complexity 1 18 -14 1337 114 19 0 chr5 115356714 115356924 -87728608 + L1PA13 LINE L1 5947 6160 -3 22 0 0 30 chr5 115356924 115356939 -87728593 + AT_rich Low_complexity Low_complexity 18 32 0 24 67 0 0 chr5 115357261 115357306 -87728226 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr5 115357968 115358006 -87727526 + AT_rich Low_complexity Low_complexity 1 38 0 2125 142 82 17 chr5 115358881 115359283 -87726249 + MSTA LTR MaLR 1 428 0 551 248 99 80 chr5 115361191 115361349 -87724183 - Charlie4a DNA MER1_type -1476 485 331 1958 150 0 0 chr5 115361349 115361642 -87723890 + AluSx SINE Alu 12 304 -8 551 248 99 80 chr5 115361642 115361958 -87723574 - Charlie4a DNA MER1_type -1630 331 2 475 365 30 23 chr5 115362103 115362407 -87723125 + HERV16 LTR ERVL 1717 2022 -2974 180 141 0 183 chr5 115362432 115362503 -87723029 - L3 LINE CR1 -716 861 804 257 250 0 0 chr5 115362503 115362555 -87722977 + HERV16 LTR ERVL 2203 2254 -3510 660 201 22 0 chr5 115362608 115362747 -87722785 + LOR1b LTR ERV1 1 142 -319 * 685 154 140 7 chr5 115362742 115362885 -87722647 + LOR1a LTR ERV1 189 350 -147 1377 141 53 13 chr5 115362892 115363119 -87722413 + THE1B LTR MaLR 129 364 0 12872 141 19 16 chr5 115363119 115365258 -87720274 - Tigger1 DNA MER2_type -274 2144 1 21 71 0 0 chr5 115368429 115368471 -87717061 + AT_rich Low_complexity Low_complexity 1 42 0 1478 268 69 55 chr5 115568503 115569596 -87515936 - L1 LINE L1 -1216 4930 3773 3710 212 22 25 chr5 115569624 115570530 -87515002 - L1MA10 LINE L1 -4 7032 6130 3304 140 38 19 chr5 115570530 115571041 -87514491 - L1MA4A LINE L1 0 6303 5776 201 74 0 0 chr5 115571041 115571068 -87514464 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3304 140 38 19 chr5 115571068 115571184 -87514348 - L1MA4A LINE L1 -527 5776 5664 1407 108 31 27 chr5 115571185 115571214 -87514318 - THE1A LTR MaLR -132 223 196 2730 19 0 3 chr5 115571214 115571526 -87514006 + AluYa5 SINE Alu 1 311 0 1407 108 31 27 chr5 115571526 115571718 -87513814 - THE1A LTR MaLR -159 196 1 3755 185 29 20 chr5 115571722 115572672 -87512860 - L1MA10 LINE L1 -748 6100 5191 5200 230 13 8 chr5 115572772 115574119 -87511413 - L1MA10 LINE L1 -2098 4750 3398 7619 232 42 9 chr5 115574160 115575944 -87509588 - L1MA10 LINE L1 -4373 2476 636 875 169 25 3 chr5 115575948 115576190 -87509342 - L1MA4A LINE L1 -744 5402 5229 2195 164 21 11 chr5 115576190 115576563 -87508969 - MSTB LTR MaLR -49 377 1 561 288 76 11 chr5 115576576 115576958 -87508574 - L1M4 LINE L1 -2357 4025 3619 1803 241 44 41 chr5 115577058 115577722 -87507810 - L1M4 LINE L1 -4984 1400 735 266 303 53 22 chr5 115577723 115578046 -87507486 + L1 LINE L1 4268 4600 -1546 393 251 81 85 chr5 115578249 115578496 -87507036 + L1 LINE L1 4756 5001 -1145 329 196 0 18 chr5 115578711 115578767 -87506765 + FLAM SINE Alu 62 116 -17 192 125 0 0 chr5 115580051 115580083 -87505449 + (TTA)n Simple_repeat Simple_repeat 2 33 0 33 43 0 0 chr5 115580351 115580398 -87505134 + AT_rich Low_complexity Low_complexity 1 47 0 474 311 17 17 chr5 115580504 115580681 -87504851 + MER5B DNA MER1_type 1 177 -1 284 381 65 43 chr5 115581076 115581475 -87504057 + L3 LINE CR1 309 716 -861 24 0 0 0 chr5 115582701 115582725 -87502807 + AT_rich Low_complexity Low_complexity 1 24 0 2047 21 0 0 chr5 115582725 115582964 -87502568 - L1PA3 LINE L1 -2 6153 5915 633 294 18 69 chr5 115583123 115583399 -87502133 + MER92B LTR ERV1 237 498 -138 6742 132 36 11 chr5 115583413 115583426 -87502106 + L1PBa LINE L1 4 15 -6848 3870 146 42 43 chr5 115583426 115584212 -87501320 + LTR1 LTR ERV1 1 785 0 6742 132 36 11 chr5 115584212 115585596 -87499936 + L1PBa LINE L1 15 1576 -5287 306 275 77 0 chr5 115585596 115585687 -87499845 + MER92A LTR ERV1 313 410 -2 22 70 0 0 chr5 115585809 115585852 -87499680 + AT_rich Low_complexity Low_complexity 1 43 0 235 294 119 0 chr5 115585989 115586132 -87499400 - L1M4 LINE L1 -1314 4832 4673 237 132 0 0 chr5 115586392 115586430 -87499102 + (A)n Simple_repeat Simple_repeat 1 38 0 1877 150 3 7 chr5 115588259 115588590 -87496942 - AluSx SINE Alu 0 330 1 2102 140 36 36 chr5 115589821 115590185 -87495347 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr5 115590957 115590979 -87494553 + AT_rich Low_complexity Low_complexity 1 22 0 526 226 0 97 chr5 115591238 115591433 -87494099 - MER104 DNA MER2_type 0 180 5 27 0 0 0 chr5 115591447 115591474 -87494058 + AT_rich Low_complexity Low_complexity 1 27 0 234 339 55 0 chr5 115591793 115591902 -87493630 + L2 LINE L2 1964 2078 -1236 194 61 0 30 chr5 115592305 115592338 -87493194 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1625 140 0 62 chr5 115592340 115592632 -87492900 + AluSx SINE Alu 30 303 -9 479 411 79 72 chr5 115592695 115593240 -87492292 - L1MEd LINE L1 -5044 1075 527 6890 238 82 21 chr5 115593796 115595920 -87489612 + L1M4c LINE L1 2063 4411 -1971 11892 159 34 43 chr5 115595920 115597416 -87488116 + Tigger1 DNA MER2_type 1 1467 -951 1825 170 3 3 chr5 115597416 115597728 -87487804 + AluSx SINE Alu 1 312 0 11892 159 34 43 chr5 115597728 115598672 -87486860 + Tigger1 DNA MER2_type 1467 2418 0 6890 238 82 21 chr5 115598672 115599467 -87486065 + L1M4c LINE L1 4411 5156 -1226 818 108 7 58 chr5 115599469 115599608 -87485924 - L1M2 LINE L1 -663 5649 5518 * 1041 289 144 38 chr5 115599606 115600190 -87485342 - L1M3c LINE L1 -5028 1113 468 1677 289 37 5 chr5 115600193 115600598 -87484934 - L1M3c LINE L1 -5719 422 5 273 128 0 0 chr5 115600623 115600670 -87484862 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 31 44 0 0 chr5 115600670 115600715 -87484817 + AT_rich Low_complexity Low_complexity 1 45 0 1882 218 18 11 chr5 115600879 115601259 -87484273 + L1M1 LINE L1 13 395 -7170 * 6328 138 25 17 chr5 115601258 115602577 -87482955 + L1MA3 LINE L1 5183 6514 -27 306 0 0 0 chr5 115602577 115602611 -87482921 + (TA)n Simple_repeat Simple_repeat 2 35 0 6328 138 25 17 chr5 115602611 115602639 -87482893 + L1MA3 LINE L1 6514 6540 -1 23 0 0 0 chr5 115603314 115603337 -87482195 + AT_rich Low_complexity Low_complexity 1 23 0 30 27 0 0 chr5 115603805 115603842 -87481690 + AT_rich Low_complexity Low_complexity 1 37 0 874 141 0 27 chr5 115603975 115604160 -87481372 + (TCC)n Simple_repeat Simple_repeat 1 180 0 281 194 0 15 chr5 115604162 115604229 -87481303 + CT-rich Low_complexity Low_complexity 2 67 0 279 113 0 0 chr5 115607285 115607338 -87478194 + (TC)n Simple_repeat Simple_repeat 2 54 0 339 25 0 0 chr5 115607338 115607378 -87478154 + (CA)n Simple_repeat Simple_repeat 1 40 0 2199 72 13 23 chr5 115607749 115608056 -87477476 - AluY SINE Alu -7 304 1 230 140 0 40 chr5 115608971 115609021 -87476511 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 210 172 52 17 chr5 115609022 115609080 -87476452 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 180 77 0 0 chr5 115610356 115610382 -87475150 + (TTTTTA)n Simple_repeat Simple_repeat 6 31 0 622 314 33 30 chr5 115610622 115610925 -87474607 - MLT1I LTR MaLR -2 407 104 194 79 0 26 chr5 115612868 115612906 -87472626 + (TATAA)n Simple_repeat Simple_repeat 3 39 0 835 230 75 0 chr5 115614071 115614271 -87471261 + MIR SINE MIR 33 247 -15 23 33 0 0 chr5 115614274 115614304 -87471228 + AT_rich Low_complexity Low_complexity 1 30 0 960 300 102 28 chr5 115615889 115616456 -87469076 + MER90 LTR ERV1 6 614 0 741 325 69 72 chr5 115616555 115617430 -87468102 + L2 LINE L2 2271 3136 -177 1129 253 78 9 chr5 115617432 115618001 -87467531 + L1MB8 LINE L1 2269 2883 -3499 * 3515 143 32 10 chr5 115617996 115618620 -87466912 + L1PA16 LINE L1 5281 5918 -248 3513 19 0 25 chr5 115618622 115618958 -87466574 - L1PA2 LINE L1 0 6155 5831 2404 4 0 0 chr5 115618958 115619221 -87466311 - AluYa5 SINE Alu -14 297 35 3513 19 0 25 chr5 115619221 115619316 -87466216 - L1PA2 LINE L1 -324 5831 5735 1302 62 3 4 chr5 115619312 115620393 -87465139 + L1PA16 LINE L1 4912 6165 -1 4351 225 98 63 chr5 115620412 115621180 -87464352 + L1MB8 LINE L1 3278 4018 -2396 318 26 0 0 chr5 115621180 115621219 -87464313 + (CA)n Simple_repeat Simple_repeat 1 39 0 4351 225 98 63 chr5 115621219 115621675 -87463857 + L1MB8 LINE L1 4018 4457 -1957 1624 101 26 123 chr5 115621675 115621983 -87463549 - AluSx SINE Alu -30 282 5 4351 225 98 63 chr5 115621983 115622552 -87462980 + L1MB8 LINE L1 4457 5005 -1409 206 61 0 30 chr5 115622552 115622585 -87462947 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4351 225 98 63 chr5 115622585 115623821 -87461711 + L1MB8 LINE L1 5005 6406 -8 21 57 0 0 chr5 115623865 115623900 -87461632 + AT_rich Low_complexity Low_complexity 1 35 0 310 350 82 5 chr5 115624158 115624280 -87461252 - L1ME3 LINE L1 -212 5950 5804 1204 125 107 5 chr5 115624280 115624504 -87461028 - L1MA4 LINE L1 -3 6297 6051 310 350 82 5 chr5 115624504 115624587 -87460945 - L1ME3 LINE L1 -358 5804 5729 376 258 30 48 chr5 115624708 115624875 -87460657 - MER3 DNA MER1_type 0 2428 2265 368 219 57 8 chr5 115624888 115625011 -87460521 - MER3 DNA MER1_type -87 122 41 496 198 21 21 chr5 115625971 115626067 -87459465 + AluJ/FLAM SINE Alu 4 99 -213 35 24 0 0 chr5 115626072 115626114 -87459418 + AT_rich Low_complexity Low_complexity 1 42 0 1014 192 0 0 chr5 115626179 115626385 -87459147 + AluJo SINE Alu 111 316 0 1635 149 39 12 chr5 115626685 115627020 -87458512 - L1MA5 LINE L1 -5 6295 5952 28 61 0 0 chr5 115627708 115627757 -87457775 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr5 115627854 115627877 -87457655 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr5 115628107 115628150 -87457382 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr5 115629336 115629364 -87456168 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 115629574 115629609 -87455923 + AT_rich Low_complexity Low_complexity 1 35 0 753 208 35 6 chr5 115629683 115629856 -87455676 - L1P LINE L1 -2071 4075 3898 2514 143 7 11 chr5 115629857 115630296 -87455236 + L1PA16 LINE L1 5730 6166 0 239 158 0 0 chr5 115630310 115630348 -87455184 + MLT1I LTR MaLR 14 51 -358 1587 180 90 49 chr5 115630376 115630904 -87454628 + L1MA9 LINE L1 5645 6290 -22 24 32 0 0 chr5 115631991 115632022 -87453510 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 115633896 115633918 -87451614 + AT_rich Low_complexity Low_complexity 1 22 0 299 257 25 98 chr5 115634416 115634548 -87450984 - HAL1 LINE L1 0 2507 2367 2136 131 10 44 chr5 115634548 115634936 -87450596 + THE1C LTR MaLR 1 375 0 299 257 25 98 chr5 115634936 115635005 -87450527 - HAL1 LINE L1 -140 2367 2329 2219 181 10 0 chr5 115635005 115635404 -87450128 + MER57A LTR ERV1 1 403 0 299 257 25 98 chr5 115635404 115635477 -87450055 - HAL1 LINE L1 -178 2329 2252 456 219 62 34 chr5 115635562 115635708 -87449824 - L1MD2 LINE L1 -16 6761 6612 3995 259 61 42 chr5 115635731 115638297 -87447235 - L1MD2 LINE L1 -239 6538 3928 1554 219 46 14 chr5 115638593 115638962 -87446570 - L1MC2 LINE L1 0 6344 5964 463 244 180 58 chr5 115638973 115639145 -87446387 - MIR SINE MIR -66 196 4 252 191 9 86 chr5 115639323 115639428 -87446104 + L1MC4 LINE L1 6607 6703 -1339 321 302 0 0 chr5 115639428 115639514 -87446018 - L1MC4 LINE L1 -1343 6699 6614 267 209 44 55 chr5 115639519 115639610 -87445922 + L1MCa LINE L1 663 752 -5674 637 290 0 0 chr5 115639619 115639788 -87445744 - L1MD2 LINE L1 -5212 833 665 209 239 0 0 chr5 115639799 115639845 -87445687 + MIR SINE MIR 217 262 0 295 167 14 42 chr5 115640396 115640468 -87445064 - AluS SINE Alu 0 300 231 695 144 9 0 chr5 115640468 115640579 -87444953 - AluSq/x SINE Alu -200 112 1 30 59 0 0 chr5 115640583 115640634 -87444898 + AT_rich Low_complexity Low_complexity 1 51 0 4487 172 68 5 chr5 115641329 115642171 -87443361 - MER4D LTR ERV1 -8 895 1 326 306 32 62 chr5 115642923 115643292 -87442240 + L1M4 LINE L1 3539 3896 -2250 556 311 79 42 chr5 115643736 115644507 -87441025 + L1M4 LINE L1 4309 5108 -1038 949 237 171 25 chr5 115644900 115645339 -87440193 + MLT1D LTR MaLR 3 505 0 27 0 0 0 chr5 115646068 115646095 -87439437 + AT_rich Low_complexity Low_complexity 1 27 0 28 48 0 0 chr5 115646375 115646417 -87439115 + AT_rich Low_complexity Low_complexity 1 42 0 455 306 127 24 chr5 115647928 115648420 -87437112 - L1ME3A LINE L1 -226 5944 5405 21 36 0 0 chr5 115648579 115648607 -87436925 + AT_rich Low_complexity Low_complexity 1 28 0 272 228 2 101 chr5 115648663 115648829 -87436703 - L1MEc LINE L1 -3940 2275 2168 328 295 106 42 chr5 115648859 115649076 -87436456 - L1MEc LINE L1 -4317 2079 1849 247 271 89 50 chr5 115649343 115649624 -87435908 - L1MEc LINE L1 -4935 1461 1170 1390 217 19 29 chr5 115649625 115649672 -87435860 - MLT2B3 LTR ERVL 0 554 508 377 20 20 0 chr5 115649672 115649722 -87435810 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 1390 217 19 29 chr5 115649722 115649987 -87435545 - MLT2B3 LTR ERVL -46 508 245 298 114 0 0 chr5 115650013 115650057 -87435475 - MSTB2 LTR MaLR 0 428 385 333 185 0 0 chr5 115650062 115650127 -87435405 + (TATG)n Simple_repeat Simple_repeat 2 66 0 259 157 133 72 chr5 115650127 115650210 -87435322 - MLT2B1 LTR ERVL -40 480 393 * 881 164 0 7 chr5 115650145 115650291 -87435241 - MSTB2 LTR MaLR -60 397 253 254 273 56 7 chr5 115650320 115650463 -87435069 - L1MEc LINE L1 -5232 1164 1015 551 329 65 55 chr5 115650466 115650971 -87434561 - L1MEc LINE L1 -5867 529 20 286 265 0 26 chr5 115651620 115651737 -87433795 + (TA)n Simple_repeat Simple_repeat 1 114 0 205 286 114 29 chr5 115651739 115651844 -87433688 + MER5B DNA MER1_type 51 164 -14 603 268 108 5 chr5 115653113 115653326 -87432206 - L1ME3A LINE L1 -13 6157 5923 2591 24 0 0 chr5 115653600 115653893 -87431639 - AluY SINE Alu -18 293 1 23 78 0 0 chr5 115654118 115654169 -87431363 + AT_rich Low_complexity Low_complexity 1 51 0 1511 105 140 4 chr5 115654624 115654889 -87430643 - AluSg1 SINE Alu 0 318 23 26 64 0 0 chr5 115655454 115655501 -87430031 + AT_rich Low_complexity Low_complexity 1 47 0 1698 132 12 4 chr5 115656058 115656316 -87429216 + AluSg SINE Alu 29 288 -22 194 62 31 0 chr5 115656316 115656348 -87429184 + (TA)n Simple_repeat Simple_repeat 2 34 0 1308 222 25 22 chr5 115656519 115656843 -87428689 + MLT1B LTR MaLR 66 390 0 746 243 22 49 chr5 115657230 115657600 -87427932 - L1M4 LINE L1 -2884 3262 2903 231 183 17 17 chr5 115657902 115657962 -87427570 + A-rich Low_complexity Low_complexity 3 62 0 6009 149 28 21 chr5 115658007 115658803 -87426729 - L1MA4A LINE L1 -6 6297 5508 2321 151 3 3 chr5 115658803 115659167 -87426365 - THE1B LTR MaLR 0 364 1 6009 149 28 21 chr5 115659167 115660131 -87425401 - L1MA4A LINE L1 -795 5508 4515 21 0 0 0 chr5 115660321 115660342 -87425190 + AT_rich Low_complexity Low_complexity 1 21 0 338 343 111 5 chr5 115660349 115660547 -87424985 + MIR SINE MIR 12 230 -32 211 327 109 0 chr5 115660780 115660890 -87424642 + MIR SINE MIR 48 169 -93 887 224 28 48 chr5 115660947 115661305 -87424227 - Charlie2 DNA MER1_type -440 2422 2072 29 0 0 0 chr5 115662017 115662046 -87423486 + AT_rich Low_complexity Low_complexity 1 29 0 2256 106 3 0 chr5 115662223 115662526 -87423006 + AluSx SINE Alu 1 304 -8 673 282 24 44 chr5 115662677 115662883 -87422649 - MER20 DNA MER1_type -17 202 1 27 62 0 0 chr5 115662906 115662954 -87422578 + AT_rich Low_complexity Low_complexity 1 48 0 436 205 13 115 chr5 115665449 115665605 -87419927 + L2 LINE L2 3169 3308 -5 23 0 0 0 chr5 115665617 115665640 -87419892 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 115665698 115665726 -87419806 + AT_rich Low_complexity Low_complexity 1 28 0 252 314 31 7 chr5 115665877 115665988 -87419544 - MIR SINE MIR -61 147 75 440 352 111 28 chr5 115666544 115666905 -87418627 - MLT1K LTR MaLR -8 580 190 2622 173 13 2 chr5 115667170 115667638 -87417894 - MER31A LTR ERV1 -12 473 1 1347 176 7 76 chr5 115667883 115668226 -87417306 + AluJo SINE Alu 3 324 0 38 51 0 0 chr5 115669854 115669913 -87415619 + AT_rich Low_complexity Low_complexity 1 59 0 336 24 0 0 chr5 115670154 115670195 -87415337 + (TG)n Simple_repeat Simple_repeat 2 42 0 195 129 0 0 chr5 115670469 115670500 -87415032 + (TA)n Simple_repeat Simple_repeat 1 31 0 2552 64 0 6 chr5 115670502 115670815 -87414717 - AluY SINE Alu 0 311 1 22 0 0 0 chr5 115671656 115671678 -87413854 + AT_rich Low_complexity Low_complexity 1 22 0 783 341 91 59 chr5 115673136 115673930 -87411602 + L2 LINE L2 89 907 -2407 231 278 120 19 chr5 115673935 115674043 -87411489 + L2 LINE L2 1283 1401 -1913 629 271 24 68 chr5 115674050 115674345 -87411187 - MER90 LTR ERV1 -332 282 1 1494 344 90 12 chr5 115674345 115675226 -87410306 + L2 LINE L2 1390 2338 -976 289 310 9 3 chr5 115675315 115675434 -87410098 + LTR33 LTR ERVL 31 176 -345 609 296 184 11 chr5 115676387 115676664 -87408868 - MLT1I LTR MaLR -2 407 83 594 366 140 6 chr5 115676825 115677183 -87408349 + L2 LINE L2 2369 2774 -540 1806 175 101 28 chr5 115677251 115677646 -87407886 + MSTB LTR MaLR 1 424 -2 203 136 45 0 chr5 115678113 115678157 -87407375 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 200 240 80 0 chr5 115679174 115679224 -87406308 + MER5A DNA MER1_type 59 112 -77 2700 32 0 0 chr5 115680068 115680433 -87405099 - AluY SINE Alu 0 365 1 485 205 7 20 chr5 115680518 115680669 -87404863 + CT-rich Low_complexity Low_complexity 4 152 0 655 223 18 30 chr5 115680672 115680838 -87404694 - FRAM SINE Alu -6 170 7 21 71 0 0 chr5 115682026 115682068 -87403464 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 115682276 115682297 -87403235 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 115682468 115682489 -87403043 + AT_rich Low_complexity Low_complexity 1 21 0 1940 151 38 41 chr5 115682495 115682860 -87402672 - THE1B LTR MaLR 0 364 1 691 296 92 30 chr5 115683032 115684032 -87401500 - L1MDa LINE L1 -3639 3302 2259 376 281 0 0 chr5 115684050 115684132 -87401400 + FRAM/FAM SINE Alu 1 80 -86 2557 148 92 2 chr5 115684161 115684627 -87400905 - L1PA15 LINE L1 -16 6149 5642 259 210 65 16 chr5 115684644 115684706 -87400826 + FLAM SINE Alu 67 131 -2 1122 163 93 70 chr5 115684840 115685140 -87400392 - L1MA6 LINE L1 0 6300 5994 * 8908 195 46 17 chr5 115685125 115687281 -87398251 - L1 LINE L1 -1252 4894 2677 353 301 45 41 chr5 115687335 115688018 -87397514 - L1MDa LINE L1 -4943 1480 1168 225 286 34 46 chr5 115688635 115688810 -87396722 - L1MDa LINE L1 -6226 197 25 584 99 25 25 chr5 115689008 115689110 -87396422 + (TCTA)n Simple_repeat Simple_repeat 2 106 -16 1834 194 33 6 chr5 115689110 115689475 -87396057 + THE1C LTR MaLR 1 375 0 584 99 25 25 chr5 115689475 115689493 -87396039 + (TCTA)n Simple_repeat Simple_repeat 105 122 0 222 296 108 38 chr5 115689612 115689798 -87395734 + L2 LINE L2 2459 2657 -657 191 355 0 0 chr5 115690002 115690064 -87395468 + L2 LINE L2 2898 2959 -313 547 121 57 7 chr5 115690512 115690653 -87394879 + (ATATG)n Simple_repeat Simple_repeat 5 152 0 23 68 0 0 chr5 115690967 115691011 -87394521 + AT_rich Low_complexity Low_complexity 1 44 0 414 299 82 34 chr5 115691090 115691297 -87394235 + MIR SINE MIR 25 241 -21 191 403 24 16 chr5 115691435 115691559 -87393973 - MIR SINE MIR -136 126 2 444 326 62 56 chr5 115692138 115692442 -87393090 + MER69 DNA AcHobo 1 306 -2220 278 189 167 44 chr5 115692523 115692613 -87392919 - MER69 DNA AcHobo -1120 106 6 410 332 84 21 chr5 115692698 115692888 -87392644 - HAL1 LINE L1 -591 1916 1715 436 368 18 18 chr5 115693008 115693231 -87392301 - MIR SINE MIR -39 223 1 218 350 44 25 chr5 115694474 115694634 -87390898 - MIR SINE MIR -61 201 39 21 57 0 0 chr5 115694797 115694832 -87390700 + AT_rich Low_complexity Low_complexity 1 35 0 208 188 21 0 chr5 115695115 115695163 -87390369 + (TA)n Simple_repeat Simple_repeat 1 49 0 24 32 0 0 chr5 115696185 115696216 -87389316 + AT_rich Low_complexity Low_complexity 1 31 0 348 278 68 56 chr5 115697848 115698082 -87387450 + MIR SINE MIR 20 256 -6 183 42 0 0 chr5 115699094 115699118 -87386414 + (TATTG)n Simple_repeat Simple_repeat 5 28 0 183 42 0 0 chr5 115699162 115699186 -87386346 + (TATTG)n Simple_repeat Simple_repeat 5 28 0 30 89 0 0 chr5 115699205 115699284 -87386248 + AT_rich Low_complexity Low_complexity 1 79 0 292 288 123 37 chr5 115699421 115699584 -87385948 - MIR SINE MIR -14 248 72 699 212 0 0 chr5 115699779 115699911 -87385621 - FLAM_C SINE Alu -1 132 1 682 237 13 0 chr5 115700292 115700308 -87385224 - L1MA10 LINE L1 -2 6332 6317 3623 215 76 84 chr5 115700308 115702637 -87382895 - L1ME1 LINE L1 -9 6226 3923 3474 281 68 33 chr5 115702637 115702764 -87382768 - L1ME1 LINE L1 -4080 2316 2195 2141 104 17 3 chr5 115702764 115703061 -87382471 + AluSx SINE Alu 1 301 -11 3474 281 68 33 chr5 115703061 115703641 -87381891 - L1ME1 LINE L1 -4201 2195 1637 180 0 0 0 chr5 115703641 115703661 -87381871 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3474 281 68 33 chr5 115703661 115704822 -87380710 - L1ME1 LINE L1 -4759 1637 381 237 328 73 54 chr5 115704836 115705190 -87380342 + MER65A LTR ERV1 1 361 -84 571 263 99 13 chr5 115705295 115705527 -87380005 - L1ME1 LINE L1 -6025 371 120 26 30 0 0 chr5 115706595 115706628 -87378904 + AT_rich Low_complexity Low_complexity 1 33 0 208 192 41 27 chr5 115706676 115706749 -87378783 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 241 195 69 23 chr5 115709416 115709503 -87376029 - MER5C DNA MER1_type -52 272 182 488 262 0 16 chr5 115710197 115710323 -87375209 - MER5C DNA MER1_type -200 124 1 357 281 24 0 chr5 115711311 115711475 -87374057 + (TA)n Simple_repeat Simple_repeat 1 168 0 39 0 0 0 chr5 115712037 115712076 -87373456 + AT_rich Low_complexity Low_complexity 1 39 0 10576 35 12 5 chr5 115712076 115714139 -87371393 - L1PA4 LINE L1 -11 6144 4074 26 30 0 0 chr5 115714684 115714717 -87370815 + AT_rich Low_complexity Low_complexity 1 33 0 204 316 105 40 chr5 115714895 115715047 -87370485 + MER5A DNA MER1_type 27 188 -1 929 194 32 183 chr5 115716097 115716534 -87368998 + MER67D LTR ERV1 1 371 -143 2007 138 7 0 chr5 115716742 115717040 -87368492 - AluSx SINE Alu -12 300 1 225 359 66 28 chr5 115718716 115718822 -87366710 + MIR SINE MIR 23 132 -76 273 339 46 23 chr5 115719314 115719444 -87366088 + L2 LINE L2 3136 3268 -4 301 326 70 40 chr5 115720256 115720529 -87365003 - L2 LINE L2 -520 2794 2514 590 299 78 59 chr5 115720945 115721353 -87364179 + LTR33 LTR ERVL 60 475 -46 675 228 80 77 chr5 115721372 115721736 -87363796 - MER58D DNA MER1_type -12 374 10 32 57 0 0 chr5 115721763 115721816 -87363716 + AT_rich Low_complexity Low_complexity 1 53 0 27 29 0 0 chr5 115721872 115721906 -87363626 + AT_rich Low_complexity Low_complexity 1 34 0 243 213 200 25 chr5 115721918 115721998 -87363534 - L2 LINE L2 -10 3303 3210 23 0 0 0 chr5 115722496 115722519 -87363013 + AT_rich Low_complexity Low_complexity 1 23 0 223 288 30 0 chr5 115722558 115722624 -87362908 - MIR SINE MIR -90 172 105 207 292 0 0 chr5 115723153 115723201 -87362331 - MIR SINE MIR -121 141 94 236 300 71 0 chr5 115723289 115723359 -87362173 + MIR3 SINE MIR 124 198 -10 513 390 12 8 chr5 115723375 115723621 -87361911 - MIR SINE MIR -12 250 4 22 0 0 0 chr5 115723853 115723875 -87361657 + AT_rich Low_complexity Low_complexity 1 22 0 4471 117 28 32 chr5 115724152 115724893 -87360639 + Tigger1 DNA MER2_type 1341 2078 -340 1066 165 50 0 chr5 115724897 115725097 -87360435 + Tigger1 DNA MER2_type 2209 2418 0 354 194 20 10 chr5 115725144 115725242 -87360290 + (TA)n Simple_repeat Simple_repeat 1 99 0 980 195 19 24 chr5 115725290 115725495 -87360037 + MER2 DNA MER2_type 7 210 -135 1502 115 7 101 chr5 115725722 115726018 -87359514 + AluSx SINE Alu 1 268 -44 270 81 0 0 chr5 115726028 115726065 -87359467 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 203 133 0 0 chr5 115726065 115726095 -87359437 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1625 254 60 36 chr5 115726292 115726795 -87358737 - MLT1E2 LTR MaLR -1 625 111 189 0 0 0 chr5 115726877 115726898 -87358634 + (T)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr5 115728055 115728079 -87357453 + AT_rich Low_complexity Low_complexity 1 24 0 239 91 0 23 chr5 115728233 115728277 -87357255 + (CAA)n Simple_repeat Simple_repeat 3 45 0 268 297 27 0 chr5 115728514 115728588 -87356944 - MER69 DNA AcHobo -2450 76 1 271 301 129 12 chr5 115730455 115730618 -87354914 - MIR SINE MIR -15 247 66 504 306 43 11 chr5 115730752 115730938 -87354594 + MIR SINE MIR 15 206 -56 234 62 0 0 chr5 115730943 115730975 -87354557 + (CA)n Simple_repeat Simple_repeat 2 33 0 29 47 0 0 chr5 115731419 115731462 -87354070 + AT_rich Low_complexity Low_complexity 1 43 0 252 0 0 0 chr5 115731754 115731782 -87353750 + (TTA)n Simple_repeat Simple_repeat 3 30 0 34693 68 16 4 chr5 115731782 115737227 -87348305 - L1PA5 LINE L1 -18 6136 623 279 0 0 0 chr5 115737829 115737860 -87347672 + (CA)n Simple_repeat Simple_repeat 2 32 0 2534 244 34 37 chr5 115738459 115739210 -87346322 - MER45B DNA AcHobo 0 1040 298 23 0 0 0 chr5 115739465 115739488 -87346044 + AT_rich Low_complexity Low_complexity 1 23 0 6861 63 6 10 chr5 115740564 115741799 -87343733 + L1PA5 LINE L1 4918 6153 -1 201 226 0 0 chr5 115741830 115741883 -87343649 + (TA)n Simple_repeat Simple_repeat 1 53 0 356 289 64 15 chr5 115741885 115742092 -87343440 + L1ME3A LINE L1 5448 5658 -508 207 0 0 0 chr5 115742098 115742121 -87343411 + (TA)n Simple_repeat Simple_repeat 1 23 0 1085 249 26 98 chr5 115742142 115742562 -87342970 + L1ME3A LINE L1 5662 6039 -131 832 0 0 0 chr5 115742562 115742693 -87342839 + L1PA3 LINE L1 6052 6182 0 1085 249 26 98 chr5 115742693 115742804 -87342728 + L1ME3A LINE L1 6039 6156 -14 33 0 0 0 chr5 115744902 115744935 -87340597 + AT_rich Low_complexity Low_complexity 1 33 0 371 269 57 14 chr5 115745388 115745529 -87340003 + MLT1L LTR MaLR 465 611 -4 24 53 0 0 chr5 115745599 115745637 -87339895 + AT_rich Low_complexity Low_complexity 1 38 0 627 363 12 41 chr5 115746108 115746450 -87339082 + HERVL LTR ERVL 2882 3213 -2441 7464 30 12 0 chr5 115747872 115748948 -87336584 - L1PA4 LINE L1 -3 6152 5072 17170 37 5 0 chr5 115748950 115751068 -87334464 + L1P LINE L1 2902 5030 -1116 2886 168 52 65 chr5 115751346 115752044 -87333488 - L1MA9 LINE L1 -6 6306 5618 26 64 0 0 chr5 115752365 115752412 -87333120 + AT_rich Low_complexity Low_complexity 1 47 0 601 209 0 8 chr5 115752421 115752581 -87332951 - L1M4 LINE L1 -565 5619 5466 2068 229 47 56 chr5 115752587 115753842 -87331690 - L1M4c LINE L1 -4530 2507 1406 447 75 0 151 chr5 115753963 115754056 -87331476 - MADE1 DNA Mariner 0 80 2 2162 240 41 16 chr5 115754196 115754758 -87330774 - L1MD2 LINE L1 -22 6337 5762 22 56 0 0 chr5 115758172 115758208 -87327324 + AT_rich Low_complexity Low_complexity 1 36 0 213 65 0 0 chr5 115759241 115759272 -87326260 + (TC)n Simple_repeat Simple_repeat 2 32 0 192 267 0 0 chr5 115759280 115759340 -87326192 + (TA)n Simple_repeat Simple_repeat 1 60 0 195 42 0 0 chr5 115760539 115760563 -87324969 + (CA)n Simple_repeat Simple_repeat 1 24 0 227 388 25 8 chr5 115761416 115761537 -87323995 + MIR3 SINE MIR 40 162 -46 207 160 0 40 chr5 115761754 115761804 -87323728 + (TATAA)n Simple_repeat Simple_repeat 1 48 0 23 33 0 0 chr5 115762060 115762090 -87323442 + AT_rich Low_complexity Low_complexity 1 30 0 704 229 0 0 chr5 115762862 115763019 -87322513 + MLT2B1 LTR ERVL 1 157 -363 468 0 0 0 chr5 115763039 115763091 -87322441 + (TG)n Simple_repeat Simple_repeat 2 53 0 255 91 0 68 chr5 115763094 115763138 -87322394 + MLT2C2 LTR ERVL 422 462 -2 1653 172 15 18 chr5 115763682 115764013 -87321519 - L1PA16 LINE L1 -537 5629 5300 860 111 0 37 chr5 115764012 115764147 -87321385 + L1PA16 LINE L1 5639 5768 -398 * 6803 62 18 0 chr5 115764168 115765237 -87320295 - L1PA7 LINE L1 -6 6148 5069 1742 179 57 3 chr5 115765241 115765592 -87319940 + L1PA16 LINE L1 5793 6162 -4 294 344 70 23 chr5 115766077 115766205 -87319327 + MER119 DNA MER1_type 1 134 -449 * 383 229 13 121 chr5 115766192 115766349 -87319183 + MER119 DNA MER1_type 444 583 0 286 188 0 0 chr5 115766645 115766693 -87318839 - MLT2D LTR ERVL 0 414 367 183 80 0 0 chr5 115766696 115766721 -87318811 + (TG)n Simple_repeat Simple_repeat 2 26 0 279 0 0 0 chr5 115766766 115766797 -87318735 + (GA)n Simple_repeat Simple_repeat 2 32 0 840 253 105 65 chr5 115766804 115767203 -87318329 - MLT2B1 LTR ERVL -78 442 28 1169 279 54 47 chr5 115767220 115767315 -87318217 - L1ME3A LINE L1 -125 6045 5952 4931 158 20 18 chr5 115767315 115767888 -87317644 - MER4D LTR ERV1 0 903 326 2523 62 0 3 chr5 115767888 115768195 -87317337 + AluY SINE Alu 1 306 -5 4931 158 20 18 chr5 115768195 115768522 -87317010 - MER4D LTR ERV1 -577 326 1 1169 279 54 47 chr5 115768522 115768899 -87316633 - L1ME3A LINE L1 -218 5952 5579 2608 45 0 0 chr5 115768899 115769209 -87316323 + AluY SINE Alu 1 310 -1 1169 279 54 47 chr5 115769209 115769583 -87315949 - L1ME3A LINE L1 -591 5579 5197 276 284 117 25 chr5 115769585 115769747 -87315785 + L1ME2 LINE L1 5448 5624 -540 884 259 79 32 chr5 115769786 115770102 -87315430 + L1ME2 LINE L1 5821 6151 -13 520 296 202 27 chr5 115770311 115770757 -87314775 + L1ME3A LINE L1 1860 2383 -4013 237 270 16 0 chr5 115771018 115771081 -87314451 + L1ME3 LINE L1 5931 5994 -168 865 282 68 54 chr5 115771241 115771662 -87313870 + L1ME3A LINE L1 5495 5928 -311 1844 194 58 40 chr5 115771662 115772111 -87313421 + MSTB2 LTR MaLR 1 457 0 865 282 68 54 chr5 115772111 115772278 -87313254 + L1ME3A LINE L1 5928 6091 -148 1376 143 31 0 chr5 115772349 115772572 -87312960 + MER30 DNA MER1_type 1 230 0 8467 96 14 6 chr5 115772631 115774630 -87310902 - L1PA7 LINE L1 -2 6152 4131 5515 109 7 0 chr5 115774630 115775449 -87310083 + L1P LINE L1 3247 4071 -2075 200 86 29 0 chr5 115775544 115775579 -87309953 + (CA)n Simple_repeat Simple_repeat 2 37 0 515 143 263 8 chr5 115775579 115775707 -87309825 - L1MD3 LINE L1 -13 7982 7821 1629 296 57 37 chr5 115775715 115776500 -87309032 - L1MCb LINE L1 -5242 803 3 703 285 76 4 chr5 115776520 115776787 -87308745 - L1MC3 LINE L1 -923 6862 6661 2326 152 52 2 chr5 115776974 115777381 -87308151 + MSTA LTR MaLR 2 428 0 626 325 86 35 chr5 115777661 115778055 -87307477 + LTR16A LTR ERVL 37 450 0 22 0 0 0 chr5 115778102 115778124 -87307408 + AT_rich Low_complexity Low_complexity 1 22 0 468 322 124 48 chr5 115778359 115778927 -87306605 - L2 LINE L2 -1 3312 2700 385 301 125 46 chr5 115779090 115779633 -87305899 - L1ME4a LINE L1 -46 6075 5485 264 366 84 48 chr5 115779669 115779760 -87305772 - L2 LINE L2 -555 2759 2673 2104 94 0 30 chr5 115779760 115780058 -87305474 + AluY SINE Alu 1 289 -22 264 366 84 48 chr5 115780058 115780275 -87305257 - L2 LINE L2 -641 2673 2440 433 341 15 6 chr5 115780369 115780719 -87304813 + (TG)n Simple_repeat Simple_repeat 1 353 0 484 359 94 42 chr5 115780836 115781472 -87304060 - L2 LINE L2 -1233 2081 1413 350 279 74 47 chr5 115781978 115782168 -87303364 - L2 LINE L2 -6 3307 3113 6997 204 54 21 chr5 115782247 115784099 -87301433 + L1MCa LINE L1 131 1921 -4505 2085 132 7 0 chr5 115784099 115784409 -87301123 + AluSx SINE Alu 1 312 0 6997 204 54 21 chr5 115784409 115786299 -87299233 + L1MCa LINE L1 1921 4066 -2360 228 267 33 44 chr5 115786350 115786440 -87299092 + L1MCa LINE L1 4046 4134 -2292 1951 115 59 0 chr5 115786784 115787071 -87298461 + AluSg SINE Alu 1 304 -6 22 0 0 0 chr5 115787432 115787454 -87298078 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 115787912 115787946 -87297586 + AT_rich Low_complexity Low_complexity 1 34 0 1804 118 56 49 chr5 115790205 115790510 -87295022 - AluSx SINE Alu -3 309 3 2666 32 0 3 chr5 115790564 115790875 -87294657 + AluYa5 SINE Alu 1 310 -1 1361 81 0 0 chr5 115790875 115791048 -87294484 + AluY SINE Alu 133 305 -6 23 0 0 0 chr5 115791998 115792021 -87293511 + AT_rich Low_complexity Low_complexity 1 23 0 2028 125 0 7 chr5 115792315 115792604 -87292928 + AluSx SINE Alu 1 287 -25 186 43 0 0 chr5 115792607 115792630 -87292902 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1751 155 48 10 chr5 115792867 115793177 -87292355 + THE1B LTR MaLR 1 322 -42 223 253 12 36 chr5 115793460 115793543 -87291989 + A-rich Low_complexity Low_complexity 4 84 0 23 0 0 0 chr5 115794029 115794052 -87291480 + AT_rich Low_complexity Low_complexity 1 23 0 207 308 55 0 chr5 115794139 115794230 -87291302 - L2 LINE L2 0 3272 3177 1705 188 50 0 chr5 115794507 115794848 -87290684 + MER47A DNA MER2_type 8 365 -1 434 159 26 9 chr5 115795429 115795542 -87289990 + (TA)n Simple_repeat Simple_repeat 1 115 0 1897 181 48 12 chr5 115795562 115795991 -87289541 - MLT2D LTR ERVL -20 444 1 206 234 102 88 chr5 115796273 115796410 -87289122 + MIR SINE MIR 102 240 -22 32 86 0 0 chr5 115797578 115797659 -87287873 + AT_rich Low_complexity Low_complexity 1 81 0 328 293 47 0 chr5 115799194 115799300 -87286232 - MLT1B LTR MaLR -87 303 193 757 208 57 10 chr5 115799348 115799540 -87285992 - MLT1B LTR MaLR -189 201 1 1720 245 22 24 chr5 115799540 115799957 -87285575 - MLT1B-int LTR MaLR -2 1369 954 2187 182 34 57 chr5 115800208 115800881 -87284651 - MLT1B-int LTR MaLR -491 880 21 1456 212 63 17 chr5 115801025 115801374 -87284158 - MLT2D LTR ERVL -48 366 2 599 112 10 0 chr5 115804175 115804273 -87281259 + (GGAA)n Simple_repeat Simple_repeat 3 101 0 1298 255 35 21 chr5 115804370 115804746 -87280786 + LTR40b LTR ERVL 48 428 -34 1310 286 79 7 chr5 115804748 115805189 -87280343 + L1MDa LINE L1 168 640 -5900 2144 145 26 21 chr5 115805198 115805578 -87279954 - Tigger2 DNA MER2_type -605 2113 1732 * 5514 135 31 24 chr5 115805565 115806510 -87279022 - Tigger2 DNA MER2_type -1232 1486 536 4001 146 39 22 chr5 115809275 115810000 -87275532 + Tigger1 DNA MER2_type 521 1257 -1161 1476 183 69 14 chr5 115810000 115810289 -87275243 - AluJb SINE Alu -7 305 1 3888 94 20 11 chr5 115810312 115810921 -87274611 - L1PA7 LINE L1 -2 6152 5539 238 146 18 18 chr5 115811399 115811454 -87274078 + GA-rich Low_complexity Low_complexity 3 57 0 214 329 0 12 chr5 115812525 115812607 -87272925 - L2 LINE L2 -5 3308 3228 267 122 0 0 chr5 115813141 115813190 -87272342 + (A)n Simple_repeat Simple_repeat 1 49 0 5551 237 28 40 chr5 115813499 115815304 -87270228 - L1P LINE L1 -2014 4132 2350 200 123 92 31 chr5 115816315 115816380 -87269152 + (ATATG)n Simple_repeat Simple_repeat 4 72 0 280 302 123 22 chr5 115817468 115817647 -87267885 - Charlie8 DNA MER1_type -2136 281 85 2059 106 14 0 chr5 115818667 115818792 -87266740 + AluY SINE Alu 1 123 -188 243 0 0 0 chr5 115818792 115818819 -87266713 + (CA)n Simple_repeat Simple_repeat 2 28 0 2059 106 14 0 chr5 115818819 115818985 -87266547 + AluY SINE Alu 123 296 -15 597 294 76 5 chr5 115820238 115820449 -87265083 - MIR SINE MIR -8 254 29 205 239 0 0 chr5 115820728 115820774 -87264758 - L2 LINE L2 -10 3303 3258 5571 113 55 32 chr5 115821491 115822463 -87263069 - THE1A-int LTR MaLR -586 994 1 2221 128 11 3 chr5 115822463 115822815 -87262717 - THE1A LTR MaLR 0 355 1 671 333 5 0 chr5 115823640 115823838 -87261694 + L2 LINE L2 2462 2660 -654 261 298 24 65 chr5 115824621 115824745 -87260787 + MIR SINE MIR 73 191 -71 486 271 60 83 chr5 115825669 115825887 -87259645 + MIR SINE MIR 37 249 -13 1809 94 0 123 chr5 115826568 115826910 -87258622 + AluSg SINE Alu 1 300 -10 459 110 41 0 chr5 115827066 115827139 -87258393 + MER51B LTR ERV1 302 377 0 267 380 47 56 chr5 115829827 115830061 -87255471 + L2 LINE L2 2242 2473 -841 22 0 0 0 chr5 115830313 115830335 -87255197 + AT_rich Low_complexity Low_complexity 1 22 0 328 313 20 0 chr5 115830374 115830473 -87255059 - MIR SINE MIR -63 145 45 238 289 79 0 chr5 115830633 115830709 -87254823 - L2 LINE L2 0 3313 3232 1522 155 42 3 chr5 115831658 115831942 -87253590 - L1PA15 LINE L1 -229 5936 5642 259 185 72 18 chr5 115831959 115832021 -87253511 + FLAM_A SINE Alu 66 123 -10 5938 193 30 19 chr5 115832576 115833962 -87251570 - L1 LINE L1 -1282 4864 3465 243 0 0 0 chr5 115834204 115834231 -87251301 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 2452 111 20 0 chr5 115834231 115834584 -87250948 + MER41A LTR ERV1 195 554 0 1542 204 11 0 chr5 115835838 115836123 -87249409 + AluJo SINE Alu 1 288 -24 476 407 26 3 chr5 115836684 115836989 -87248543 + MERVL LTR ERVL 1238 1549 -3447 383 318 16 0 chr5 115837021 115837150 -87248382 + MERVL LTR ERVL 1659 1789 -3207 319 351 32 27 chr5 115837401 115837586 -87247946 + MERVL LTR ERVL 3295 3480 -2005 983 319 31 17 chr5 115837981 115838335 -87247197 + LTR16A LTR ERVL 73 431 -19 2276 68 0 39 chr5 115839003 115839336 -87246196 + AluY SINE Alu 1 311 0 3520 179 36 13 chr5 115841255 115841971 -87243561 - Tigger1 DNA MER2_type -1685 733 1 22 56 0 0 chr5 115842324 115842360 -87243172 + AT_rich Low_complexity Low_complexity 1 36 0 1059 209 53 13 chr5 115844279 115844504 -87241028 - MLT1A1 LTR MaLR -131 234 1 8309 190 13 9 chr5 115844661 115847159 -87238373 + L1PBa LINE L1 1101 3846 -3016 3052 193 17 35 chr5 115847463 115848065 -87237467 + MER52A LTR ERV1 1165 1755 0 310 258 96 60 chr5 115848138 115848305 -87237227 - L2 LINE L2 -4 3309 3137 1267 237 35 77 chr5 115848496 115849045 -87236487 + MER39 LTR ERV1 1 707 0 24 32 0 0 chr5 115849429 115849460 -87236072 + AT_rich Low_complexity Low_complexity 1 31 0 225 257 119 9 chr5 115854647 115854756 -87230776 - L1ME4a LINE L1 -3 6118 5998 22 0 0 0 chr5 115854858 115854880 -87230652 + AT_rich Low_complexity Low_complexity 1 22 0 474 88 0 0 chr5 115854880 115854948 -87230584 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 370 294 74 74 chr5 115855948 115856247 -87229285 + MLT1I LTR MaLR 79 377 -32 32 43 0 0 chr5 115856380 115856426 -87229106 + AT_rich Low_complexity Low_complexity 1 46 0 625 339 149 36 chr5 115856540 115857311 -87228221 + L2 LINE L2 374 1231 -2083 697 289 113 30 chr5 115857489 115857852 -87227680 + L2 LINE L2 2921 3313 0 2288 78 0 0 chr5 115858165 115858485 -87227047 + AluY SINE Alu 1 320 0 1215 163 58 33 chr5 115861732 115861969 -87223563 - L1MA6 LINE L1 0 6300 6054 2012 144 60 8 chr5 115861969 115862322 -87223210 + THE1C LTR MaLR 1 371 -4 1215 163 58 33 chr5 115862322 115862360 -87223172 - L1MA6 LINE L1 -246 6054 6018 180 0 0 0 chr5 115862400 115862420 -87223112 + (A)n Simple_repeat Simple_repeat 1 20 0 416 272 184 0 chr5 115862474 115862621 -87222911 - MER5A DNA MER1_type -7 182 9 772 366 37 21 chr5 115863579 115863778 -87221754 + ERVL LTR ERVL 3314 3508 -2256 1391 252 37 3 chr5 115863778 115864127 -87221405 - MLT1A1 LTR MaLR -4 361 1 772 366 37 21 chr5 115864127 115864444 -87221088 + ERVL LTR ERVL 3508 3838 -1926 791 345 70 33 chr5 115864611 115865060 -87220472 + ERVL LTR ERVL 4055 4541 -1223 192 40 0 0 chr5 115865060 115865085 -87220447 + (TTG)n Simple_repeat Simple_repeat 2 26 0 791 345 70 33 chr5 115865085 115865331 -87220201 + ERVL LTR ERVL 4541 4776 -988 832 336 54 20 chr5 115865357 115865804 -87219728 + ERVL LTR ERVL 4821 5282 -482 481 320 86 34 chr5 115866248 115866517 -87219015 + LTR16C LTR ERVL 209 491 0 992 113 34 99 chr5 115868172 115868464 -87217068 + AluSx SINE Alu 1 273 -39 1061 133 0 22 chr5 115868490 115868671 -87216861 + AluSp SINE Alu 128 304 -9 958 203 9 35 chr5 115868711 115868745 -87216787 - MER58A DNA MER1_type -2197 223 190 222 62 0 0 chr5 115868745 115868777 -87216755 + (TTGTG)n Simple_repeat Simple_repeat 2 33 0 1858 138 6 47 chr5 115868783 115869102 -87216430 - AluSx SINE Alu -4 308 3 958 203 9 35 chr5 115869102 115869287 -87216245 - MER58A DNA MER1_type -2235 185 3 2205 106 0 3 chr5 115869337 115869629 -87215903 + AluSx SINE Alu 1 291 -21 2254 107 0 7 chr5 115869771 115870071 -87215461 + AluSx SINE Alu 2 299 -13 2015 89 0 3 chr5 115870071 115870383 -87215149 + AluY SINE Alu 1 311 0 2418 152 23 0 chr5 115871484 115871872 -87213660 + MSTB1 LTR MaLR 1 397 -35 284 219 18 35 chr5 115872438 115872514 -87213018 + CT-rich Low_complexity Low_complexity 2 77 -36 1641 176 3 42 chr5 115872514 115872826 -87212706 - AluJb SINE Alu -12 300 1 284 219 18 35 chr5 115872826 115872863 -87212669 + CT-rich Low_complexity Low_complexity 77 113 0 2140 103 10 3 chr5 115876187 115876479 -87209053 - AluSp SINE Alu -19 294 1 1893 114 0 56 chr5 115876482 115876788 -87208744 - AluSx SINE Alu -22 290 2 807 143 0 21 chr5 115876788 115876928 -87208604 - AluSq/x SINE Alu -175 138 2 238 237 21 32 chr5 115878769 115878862 -87206670 + (TA)n Simple_repeat Simple_repeat 1 92 0 29 60 0 0 chr5 115879561 115879611 -87205921 + AT_rich Low_complexity Low_complexity 1 50 0 1622 132 0 118 chr5 115880140 115880480 -87205052 + AluSx SINE Alu 3 302 0 198 0 0 0 chr5 115880969 115880991 -87204541 + (CA)n Simple_repeat Simple_repeat 2 23 0 27 29 0 0 chr5 115881206 115881240 -87204292 + AT_rich Low_complexity Low_complexity 1 34 0 253 110 113 21 chr5 115881806 115881874 -87203658 - MLT1A2 LTR MaLR 0 374 297 7803 70 5 5 chr5 115882387 115883394 -87202138 - LTR13 LTR ERVK 0 1007 1 1840 110 44 0 chr5 115884079 115884351 -87201181 + AluY SINE Alu 14 297 -14 218 337 93 19 chr5 115886753 115886958 -87198574 - L2 LINE L2 -434 2880 2661 344 299 40 62 chr5 115887320 115887438 -87198094 - MER5B DNA MER1_type 0 178 64 180 0 0 0 chr5 115887438 115887458 -87198074 + (ATTTG)n Simple_repeat Simple_repeat 1 20 0 344 299 40 62 chr5 115887458 115887516 -87198016 - MER5B DNA MER1_type -114 64 6 7685 24 0 4 chr5 115887712 115889026 -87196506 + L1PA3 LINE L1 4927 6236 0 280 353 29 17 chr5 115889090 115889263 -87196269 + L2 LINE L2 2196 2370 -944 211 281 62 0 chr5 115889865 115889929 -87195603 + MIR SINE MIR 104 171 -91 4175 210 135 8 chr5 115890146 115891316 -87194216 - L1PA15-16 LINE L1 -4393 3191 1782 372 332 72 45 chr5 115891526 115891791 -87193741 - L1M2 LINE L1 -5782 1067 796 363 270 10 10 chr5 115891839 115891939 -87193593 - L1PA15-16 LINE L1 -7476 105 6 428 256 69 44 chr5 115892397 115892557 -87192975 + MLT1G LTR MaLR 427 590 0 1981 143 26 34 chr5 115892903 115893281 -87192251 + THE1C LTR MaLR 1 375 0 1984 128 61 19 chr5 115893639 115893999 -87191533 - THE1C LTR MaLR 0 375 1 1172 263 37 13 chr5 115894110 115894487 -87191045 + MLT1B LTR MaLR 1 386 -4 705 318 38 62 chr5 115894572 115895233 -87190299 + L1MEc LINE L1 77 721 -5675 347 294 68 62 chr5 115895439 115896149 -87189383 + L1MEc LINE L1 1033 1746 -4650 1846 211 32 53 chr5 115896151 115896187 -87189345 - MLT2C2 LTR ERVL -6 458 423 360 103 0 0 chr5 115896187 115896245 -87189287 + (CA)n Simple_repeat Simple_repeat 2 59 0 1846 211 32 53 chr5 115896245 115896358 -87189174 - MLT2C2 LTR ERVL -41 423 309 2463 63 0 0 chr5 115896358 115896658 -87188874 + AluY SINE Alu 1 300 -11 1846 211 32 53 chr5 115896658 115896975 -87188557 - MLT2C2 LTR ERVL -155 309 1 837 282 98 42 chr5 115897199 115898276 -87187256 + L1MEc LINE L1 1974 3070 -3145 1927 195 10 13 chr5 115898391 115898786 -87186746 - Tigger2 DNA MER2_type -2324 394 1 372 362 91 46 chr5 115898856 115899317 -87186215 + L2 LINE L2 2149 2630 -684 193 356 89 11 chr5 115899568 115899658 -87185874 + L2 LINE L2 2985 3081 -191 244 337 61 0 chr5 115899767 115899865 -87185667 + L2 LINE L2 3169 3272 0 496 255 139 82 chr5 115900393 115900832 -87184700 - LTR16B LTR ERVL 0 464 1 36 70 0 0 chr5 115901162 115901233 -87184299 + AT_rich Low_complexity Low_complexity 1 71 0 254 146 83 0 chr5 115901319 115901367 -87184165 - MADE1 DNA Mariner 0 80 29 192 353 88 7 chr5 115901422 115901558 -87183974 + MIR SINE MIR 102 248 -14 637 219 19 13 chr5 115902850 115903005 -87182527 - L1MB1 LINE L1 0 6168 6013 181 333 0 16 chr5 115904540 115904603 -87180929 - MER5B DNA MER1_type -6 172 111 405 0 0 0 chr5 115904658 115904703 -87180829 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2004 258 21 21 chr5 115904730 115905250 -87180282 - MLT1E2 LTR MaLR -106 520 1 399 281 175 12 chr5 115906277 115906437 -87179095 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 115906442 115906464 -87179068 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 115906596 115906620 -87178912 + AT_rich Low_complexity Low_complexity 1 24 0 211 281 132 66 chr5 115906625 115906746 -87178786 - MIR3 SINE MIR -78 130 2 290 294 0 33 chr5 115908372 115908464 -87177068 + MIR3 SINE MIR 88 176 -32 321 308 98 28 chr5 115908531 115908745 -87176787 + L2 LINE L2 3077 3305 -8 637 235 0 15 chr5 115908748 115908880 -87176652 + FLAM_C SINE Alu 1 130 -3 2796 85 24 132 chr5 115908896 115909404 -87176128 - MLT2A2 LTR ERVL 0 453 1 663 165 18 0 chr5 115909436 115909545 -87175987 + FRAM SINE Alu 54 164 -12 26 82 0 0 chr5 115909545 115909606 -87175926 + AT_rich Low_complexity Low_complexity 1 61 0 21 82 0 0 chr5 115910758 115910807 -87174725 + AT_rich Low_complexity Low_complexity 1 49 0 1638 253 203 12 chr5 115910897 115911395 -87174137 + MLT1E LTR MaLR 1 593 0 626 280 104 4 chr5 115911523 115911791 -87173741 - L1ME1 LINE L1 -9 6157 5863 495 48 0 0 chr5 115911792 115911854 -87173678 + (TAG)n Simple_repeat Simple_repeat 1 62 0 2730 96 10 5 chr5 115911870 115912257 -87173275 + MLT2A1 LTR ERVL 1 389 -55 339 140 0 0 chr5 115912257 115912307 -87173225 + HERVL-A1 LTR ERVL 1785 1834 -3820 17684 80 16 0 chr5 115912329 115914607 -87170925 + HERVL-A1 LTR ERVL 1779 4093 -1561 721 87 0 0 chr5 115914613 115914716 -87170816 + HERVL-A1 LTR ERVL 5552 5654 0 2914 74 74 2 chr5 115914716 115915123 -87170409 + MLT2A1 LTR ERVL 1 436 -8 1611 196 0 0 chr5 115915124 115915399 -87170133 - AluJo SINE Alu -33 279 5 668 244 87 12 chr5 115915404 115915646 -87169886 - L1ME1 LINE L1 -297 5869 5610 723 225 112 0 chr5 115915712 115915881 -87169651 + MLT1E1 LTR MaLR 466 653 -1 322 270 10 95 chr5 115916068 115916268 -87169264 - L1MCc LINE L1 -5592 831 649 1310 321 82 16 chr5 115916282 115916917 -87168615 - L1MCc LINE L1 -5728 695 19 243 0 0 0 chr5 115917179 115917206 -87168326 + (CA)n Simple_repeat Simple_repeat 2 28 0 492 261 133 60 chr5 115918589 115918807 -87166725 - MIR SINE MIR 0 262 29 204 254 16 0 chr5 115920278 115920341 -87165191 + T-rich Low_complexity Low_complexity 6 69 0 26 0 0 0 chr5 115921072 115921098 -87164434 + AT_rich Low_complexity Low_complexity 1 26 0 1163 322 201 14 chr5 115972248 115973356 -87112176 - L2 LINE L2 -1462 1852 537 432 301 137 23 chr5 115973361 115973623 -87111909 - L2 LINE L2 -2959 355 64 13681 60 6 1 chr5 115973751 115975546 -87109986 - L1PA5 LINE L1 -3166 2980 1178 18991 55 0 0 chr5 115975546 115978726 -87106806 + L1PA5 LINE L1 2966 6146 -8 30 45 0 0 chr5 115978726 115978770 -87106762 + AT_rich Low_complexity Low_complexity 1 44 0 450 53 0 0 chr5 115978998 115979055 -87106477 + (CA)n Simple_repeat Simple_repeat 2 58 0 1709 193 10 6 chr5 115980773 115981084 -87104448 - MER7A DNA MER2_type 0 346 37 209 300 22 0 chr5 115981238 115981328 -87104204 + (TAA)n Simple_repeat Simple_repeat 2 93 0 23 0 0 0 chr5 115981695 115981718 -87103814 + AT_rich Low_complexity Low_complexity 1 23 0 786 286 72 3 chr5 115982864 115983154 -87102378 - MLT1I LTR MaLR -3 406 97 369 0 0 0 chr5 115983198 115983239 -87102293 + (TG)n Simple_repeat Simple_repeat 2 42 0 5294 155 36 13 chr5 115983414 115984666 -87100866 + L1PA16 LINE L1 4879 6157 -9 699 334 58 15 chr5 115984681 115985007 -87100525 + L2 LINE L2 1807 2146 -1168 229 278 159 20 chr5 115985066 115985217 -87100315 - LTR33 LTR ERVL -58 463 292 796 211 163 13 chr5 115985224 115985451 -87100081 - MER63 DNA MER1_type 0 1060 800 1423 313 60 51 chr5 115985678 115986208 -87099324 + L2 LINE L2 2179 2703 -610 2528 232 40 15 chr5 115986208 115986815 -87098717 + MLT1E3 LTR MaLR 3 624 0 1423 313 60 51 chr5 115986815 115987377 -87098155 + L2 LINE L2 2703 3283 -30 22 70 0 0 chr5 115988062 115988105 -87097427 + AT_rich Low_complexity Low_complexity 1 43 0 2079 112 14 0 chr5 115988128 115988423 -87097109 + AluSc SINE Alu 1 299 -10 186 288 137 75 chr5 115988967 115989113 -87096419 + MIR3 SINE MIR 3 157 -51 242 317 16 32 chr5 115990442 115990565 -87094967 - MER20B DNA MER1_type -605 178 58 269 321 43 14 chr5 115990756 115990896 -87094636 + L2 LINE L2 2982 3125 -188 899 220 175 41 chr5 115991271 115991585 -87093947 + MSTB2 LTR MaLR 42 397 -60 6021 174 17 14 chr5 115991597 115993584 -87091948 + L1MA1 LINE L1 425 2405 -5316 2020 145 3 0 chr5 115993584 115993887 -87091645 + AluSp SINE Alu 5 308 -5 6021 174 17 14 chr5 115993887 115996293 -87089239 + L1MA1 LINE L1 2405 4803 -2918 1971 160 0 3 chr5 115996293 115996599 -87088933 + AluSx SINE Alu 1 305 -7 6021 174 17 14 chr5 115996599 115999353 -87086179 + L1MA1 LINE L1 4803 7721 0 1399 217 10 10 chr5 115999365 115999669 -87085863 + MSTB2-int LTR MaLR 1334 1637 -14 1370 224 85 42 chr5 115999685 116000110 -87085422 + MSTB2 LTR MaLR 15 457 0 21 0 0 0 chr5 116000356 116000377 -87085155 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 116000774 116000809 -87084723 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 116000902 116000924 -87084608 + AT_rich Low_complexity Low_complexity 1 22 0 262 253 141 0 chr5 116002655 116002754 -87082778 - MIR SINE MIR -86 176 64 288 154 0 0 chr5 116004248 116004300 -87081232 + (TA)n Simple_repeat Simple_repeat 2 53 0 303 277 101 13 chr5 116004990 116005149 -87080383 - Charlie7 DNA MER1_type 0 2612 2440 192 349 115 32 chr5 116008810 116009028 -87076504 + MIR SINE MIR 4 239 -23 2413 57 0 3 chr5 116009078 116009374 -87076158 + AluY SINE Alu 1 295 -16 22 35 0 0 chr5 116010545 116010574 -87074958 + AT_rich Low_complexity Low_complexity 1 29 0 379 198 245 0 chr5 116010918 116011024 -87074508 + MIR SINE MIR 98 229 -33 24 0 0 0 chr5 116013253 116013277 -87072255 + AT_rich Low_complexity Low_complexity 1 24 0 4511 123 9 1 chr5 116015693 116016382 -87069150 + L1PA16 LINE L1 5464 6157 -9 1090 198 30 25 chr5 116016834 116017071 -87068461 + AluJo SINE Alu 2 239 -73 219 275 0 38 chr5 116018065 116018145 -87067387 - MIR SINE MIR 0 262 186 289 300 62 6 chr5 116018173 116018333 -87067199 - L1M4b LINE L1 -4320 2818 2650 21 0 0 0 chr5 116018341 116018362 -87067170 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 116018607 116018646 -87066886 + AT_rich Low_complexity Low_complexity 1 39 0 1630 268 55 62 chr5 116018681 116018817 -87066715 - L1M4b LINE L1 -4543 2416 2281 1606 224 70 0 chr5 116018817 116019187 -87066345 - MSTD LTR MaLR 0 396 1 1630 268 55 62 chr5 116019187 116019862 -87065670 - L1M4b LINE L1 -4678 2281 1603 207 0 0 0 chr5 116019862 116019885 -87065647 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2284 76 6 38 chr5 116019886 116020228 -87065304 - L1PA7 LINE L1 -11 6143 5813 3064 147 14 8 chr5 116020234 116020738 -87064794 - L1PA16 LINE L1 -10 6156 5650 1630 268 55 62 chr5 116020738 116021125 -87064407 - L1M4b LINE L1 -5361 1598 1205 2712 293 45 34 chr5 116021543 116022458 -87063074 - L1M4b LINE L1 -5923 936 12 201 338 28 41 chr5 116023610 116023755 -87061777 + MIR SINE MIR 26 168 -94 268 219 48 9 chr5 116023926 116024031 -87061501 + (TA)n Simple_repeat Simple_repeat 1 109 0 264 267 120 26 chr5 116024071 116024262 -87061270 + L1ME2 LINE L1 4907 5115 -1031 395 177 2 62 chr5 116024287 116024385 -87061147 + AluJ/FLAM SINE Alu 2 73 -229 516 282 78 16 chr5 116024385 116024630 -87060902 + L1ME2 LINE L1 5752 6011 -153 623 193 21 0 chr5 116024645 116024785 -87060747 + L1MA10 LINE L1 6175 6317 -17 1707 139 20 0 chr5 116024966 116025218 -87060314 + AluSq SINE Alu 1 257 -56 189 74 0 0 chr5 116025672 116025699 -87059833 + (TATAA)n Simple_repeat Simple_repeat 5 31 0 5385 230 28 63 chr5 116026764 116028957 -87056575 + L1P3 LINE L1 22 2142 -4319 2353 119 0 0 chr5 116028957 116029269 -87056263 + AluSx SINE Alu 1 312 0 5385 230 28 63 chr5 116029269 116029612 -87055920 + L1P3 LINE L1 2142 2495 -3966 461 318 141 58 chr5 116030142 116030644 -87054888 - L2 LINE L2 -2 3311 2852 2322 80 0 3 chr5 116030644 116030933 -87054599 + AluY SINE Alu 1 288 -23 461 318 141 58 chr5 116030933 116031316 -87054216 - L2 LINE L2 -461 2852 2343 290 363 18 9 chr5 116032015 116032128 -87053404 - HERV16 LTR ERVL -1979 3017 2904 186 174 55 0 chr5 116032191 116032300 -87053232 + (TA)n Simple_repeat Simple_repeat 1 115 0 405 0 0 0 chr5 116032306 116032351 -87053181 + (CA)n Simple_repeat Simple_repeat 2 46 0 344 174 105 23 chr5 116032380 116032466 -87053066 - L1MA9 LINE L1 -45 6267 6175 * 2557 174 9 57 chr5 116032446 116032992 -87052540 + L1MA9 LINE L1 5609 6128 -184 2512 89 6 0 chr5 116032992 116033350 -87052182 + L1PA13 LINE L1 5801 6161 -2 925 281 143 45 chr5 116033511 116034883 -87050649 - L1MEc LINE L1 -2102 4113 2558 363 44 0 0 chr5 116034883 116034928 -87050604 + (CA)n Simple_repeat Simple_repeat 2 46 0 925 281 143 45 chr5 116034928 116035171 -87050361 - L1MEc LINE L1 -3657 2558 2340 337 329 127 17 chr5 116035208 116035445 -87050087 - L1MEc LINE L1 -4102 2294 2032 398 245 11 11 chr5 116035512 116035606 -87049926 + MER5A DNA MER1_type 13 106 -83 2291 126 0 0 chr5 116035742 116036051 -87049481 - AluSx SINE Alu -2 310 2 21 36 0 0 chr5 116037287 116037315 -87048217 + AT_rich Low_complexity Low_complexity 1 28 0 192 311 0 0 chr5 116037743 116037804 -87047728 - L2 LINE L2 -1049 2265 2205 712 162 23 6 chr5 116037880 116038053 -87047479 + CT-rich Low_complexity Low_complexity 3 178 0 355 239 0 38 chr5 116038073 116038257 -87047275 + CT-rich Low_complexity Low_complexity 2 178 0 417 20 0 0 chr5 116038479 116038529 -87047003 + (TG)n Simple_repeat Simple_repeat 2 51 0 188 353 26 39 chr5 116039784 116039937 -87045595 + MER5A DNA MER1_type 39 189 0 9697 204 55 29 chr5 116042884 116043561 -87041971 - L1MC3 LINE L1 -9 8170 7512 1712 176 0 29 chr5 116043561 116043868 -87041664 - AluJb SINE Alu -14 298 1 9697 204 55 29 chr5 116043868 116043992 -87041540 - L1MC3 LINE L1 -667 7512 7393 207 0 0 0 chr5 116043992 116044015 -87041517 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 9697 204 55 29 chr5 116044015 116046326 -87039206 - L1MC3 LINE L1 -786 7393 4964 1197 163 13 73 chr5 116046342 116046575 -87038957 + AluJo SINE Alu 14 232 -80 1611 144 33 49 chr5 116046578 116046883 -87038649 + MER1B DNA MER1_type 1 300 -39 1034 176 0 0 chr5 116046929 116047105 -87038427 - AluSg/x SINE Alu 0 310 135 787 278 34 18 chr5 116047105 116047486 -87038046 - L1MC3 LINE L1 -1654 4886 4500 4877 122 38 63 chr5 116049044 116050481 -87035051 - pTR5 LTR ERV1 0 2438 67 641 256 51 107 chr5 116050813 116051010 -87034522 - MER58B DNA MER1_type -2083 337 167 2365 57 10 10 chr5 116051010 116051308 -87034224 - AluY SINE Alu -13 298 1 641 256 51 107 chr5 116051308 116051466 -87034066 - MER58B DNA MER1_type -2253 167 2 1649 189 88 117 chr5 116051530 116052353 -87033179 - L1MC3 LINE L1 -3939 2601 1810 2193 123 3 0 chr5 116052353 116052663 -87032869 - AluSx SINE Alu 0 312 2 1649 189 88 117 chr5 116052663 116052821 -87032711 - L1MC3 LINE L1 -4730 1810 1649 3505 116 47 2 chr5 116052821 116053358 -87032174 + L1PA11 LINE L1 5607 6167 -7 355 167 179 0 chr5 116053388 116053466 -87032066 - MLT1G LTR MaLR -21 569 478 24 0 0 0 chr5 116053467 116053491 -87032041 + AT_rich Low_complexity Low_complexity 1 24 0 798 198 281 27 chr5 116053491 116053896 -87031636 - L1MC3 LINE L1 -4879 1661 1154 2028 186 26 11 chr5 116053903 116054421 -87031111 + Tigger1 DNA MER2_type 24 606 -1812 189 0 0 0 chr5 116054421 116054442 -87031090 + (TA)n Simple_repeat Simple_repeat 2 22 0 2028 186 26 11 chr5 116054442 116054725 -87030807 + Tigger1 DNA MER2_type 606 883 -1535 5598 220 38 15 chr5 116054729 116055627 -87029905 - MSTB-int LTR MaLR -160 1575 499 3127 167 59 63 chr5 116055627 116056357 -87029175 + LTR8A LTR ERV1 1 727 0 5598 220 38 15 chr5 116056357 116056868 -87028664 - MSTB-int LTR MaLR -1236 499 1 2052 181 82 0 chr5 116056868 116057260 -87028272 - MSTB LTR MaLR -2 424 1 5015 143 30 2 chr5 116057261 116058095 -87027437 + Tigger1 DNA MER2_type 1160 2016 -402 1072 166 25 0 chr5 116058177 116058376 -87027156 + Tigger1 DNA MER2_type 2215 2418 0 202 54 27 27 chr5 116058436 116058473 -87027059 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1096 308 106 41 chr5 116058475 116059180 -87026352 - L1MC3 LINE L1 -5569 971 221 918 130 125 5 chr5 116059169 116059361 -87026171 + L1MA5A LINE L1 6083 6297 0 * 262 257 0 14 chr5 116059567 116059637 -87025895 + (TA)n Simple_repeat Simple_repeat 1 69 0 25 51 0 0 chr5 116059766 116059805 -87025727 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 116060303 116060347 -87025185 + AT_rich Low_complexity Low_complexity 1 44 0 194 289 108 12 chr5 116060404 116060487 -87025045 - MIR SINE MIR -156 106 16 1291 213 79 99 chr5 116061296 116061841 -87023691 + MLT1E1 LTR MaLR 121 654 0 180 0 0 0 chr5 116062578 116062598 -87022934 + (TA)n Simple_repeat Simple_repeat 2 21 0 26 0 0 0 chr5 116063153 116063179 -87022353 + AT_rich Low_complexity Low_complexity 1 26 0 833 125 59 13 chr5 116063287 116063439 -87022093 - L1MA6 LINE L1 0 6300 6142 356 256 78 47 chr5 116064069 116064198 -87021334 - MLT1K LTR MaLR -454 134 2 200 266 0 47 chr5 116065457 116065521 -87020011 + CT-rich Low_complexity Low_complexity 1 61 0 186 103 0 0 chr5 116065881 116065910 -87019622 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 116066004 116066025 -87019507 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 116067035 116067070 -87018462 + AT_rich Low_complexity Low_complexity 1 35 0 2377 57 0 0 chr5 116067577 116067899 -87017633 - AluY SINE Alu 0 322 1 409 340 102 22 chr5 116068113 116068525 -87017007 + LTR16A1 LTR ERVL 4 448 -9 306 138 0 0 chr5 116068987 116069045 -87016487 + (TG)n Simple_repeat Simple_repeat 2 59 0 1248 137 201 8 chr5 116070052 116070286 -87015246 - AluSg1 SINE Alu -30 279 1 2334 94 3 0 chr5 116073538 116073847 -87011685 + AluSg SINE Alu 1 310 0 348 291 176 55 chr5 116073882 116074171 -87011361 + MLT1K LTR MaLR 111 434 -154 231 36 0 0 chr5 116076627 116076655 -87008877 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 45 34 0 0 chr5 116076705 116076764 -87008768 + AT_rich Low_complexity Low_complexity 1 59 0 505 218 8 8 chr5 116077177 116077301 -87008231 - L1MB8 LINE L1 -222 5956 5833 1804 271 121 12 chr5 116077312 116078167 -87007365 - L1 LINE L1 -2373 3773 2826 1183 210 25 12 chr5 116078159 116078402 -87007130 - L1M4b LINE L1 -5738 1121 876 * 1662 300 36 25 chr5 116078500 116079213 -87006319 - L1M4b LINE L1 -5987 872 14 27 29 0 0 chr5 116079337 116079371 -87006161 + AT_rich Low_complexity Low_complexity 1 34 0 543 332 128 31 chr5 116079517 116079963 -87005569 - L2 LINE L2 -5 3308 2820 1014 213 20 4 chr5 116080734 116080988 -87004544 + L1MD3 LINE L1 7730 7987 -8 1858 149 0 0 chr5 116081171 116081477 -87004055 - AluSx SINE Alu 0 306 1 22 35 0 0 chr5 116083167 116083196 -87002336 + AT_rich Low_complexity Low_complexity 1 29 0 404 304 50 48 chr5 116083254 116083576 -87001956 + L3 LINE CR1 1048 1412 -165 200 200 0 0 chr5 116083586 116083621 -87001911 + (CATA)n Simple_repeat Simple_repeat 3 37 0 2005 299 36 11 chr5 116083998 116084777 -87000755 + ERVL LTR ERVL 1762 2550 -2935 729 339 44 39 chr5 116084803 116085193 -87000339 + ERVL LTR ERVL 2639 3032 -2624 396 298 79 36 chr5 116085459 116085724 -86999808 + ERVL LTR ERVL 3393 3636 -2018 456 339 70 13 chr5 116085779 116086235 -86999297 + ERVL LTR ERVL 3734 4223 -1262 240 86 0 0 chr5 116086235 116086270 -86999262 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 456 339 70 13 chr5 116086270 116086311 -86999221 + ERVL LTR ERVL 4223 4260 -1225 26 82 0 0 chr5 116088891 116088952 -86996580 + AT_rich Low_complexity Low_complexity 1 61 0 327 136 0 0 chr5 116089412 116089471 -86996061 + (TG)n Simple_repeat Simple_repeat 2 60 0 35 24 0 0 chr5 116090177 116090219 -86995313 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 116090285 116090308 -86995224 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr5 116090487 116090525 -86995007 + AT_rich Low_complexity Low_complexity 1 38 0 201 158 0 26 chr5 116090895 116090933 -86994599 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr5 116091495 116091528 -86994004 + AT_rich Low_complexity Low_complexity 1 33 0 1098 159 37 37 chr5 116092249 116092463 -86993069 - MSTB2 LTR MaLR 0 457 244 1125 300 44 5 chr5 116092465 116092832 -86992700 - MLT1D-int LTR MaLR -1353 382 2 2250 185 20 5 chr5 116092834 116093234 -86992298 - MSTB2 LTR MaLR 0 457 52 550 238 25 0 chr5 116093234 116093356 -86992176 - FLAM_A SINE Alu -16 126 2 455 100 0 0 chr5 116093359 116093419 -86992113 - MSTB2 LTR MaLR -397 60 1 3189 234 94 4 chr5 116094304 116095740 -86989792 - L1MB7 LINE L1 -10 6672 5111 279 0 0 0 chr5 116095753 116095784 -86989748 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7565 24 0 0 chr5 116095784 116096813 -86988719 - L1PA4 LINE L1 -18 6137 5109 4979 31 5 0 chr5 116096813 116097421 -86988111 + L1PA4 LINE L1 4476 5086 -1060 4802 277 81 31 chr5 116097430 116097968 -86987564 - L1MB7 LINE L1 -1543 5101 4591 2239 107 0 0 chr5 116097968 116098259 -86987273 - AluSx SINE Alu -21 291 1 4802 277 81 31 chr5 116098259 116102171 -86983361 - L1MB7 LINE L1 -2053 4591 320 2031 113 14 0 chr5 116102509 116102818 -86982714 - AluSg SINE Alu 0 313 1 508 306 132 19 chr5 116103165 116103423 -86982109 + L2 LINE L2 3026 3312 -1 582 171 0 0 chr5 116103859 116103964 -86981568 - MLT1D LTR MaLR 0 505 401 1751 108 0 0 chr5 116104047 116104279 -86981253 - AluSq SINE Alu -14 299 68 750 270 26 11 chr5 116104281 116104470 -86981062 - MLT1D LTR MaLR -313 192 1 180 354 83 0 chr5 116104672 116104768 -86980764 - MER5B DNA MER1_type -74 104 1 6252 148 62 6 chr5 116105221 116106383 -86979149 - Tigger3b DNA MER2_type 0 1231 5 3334 229 15 6 chr5 116106597 116107262 -86978270 + HUERS-P2 LTR ERV1 947 1620 -1468 2975 96 2 55 chr5 116107262 116107731 -86977801 - MLT2A1 LTR ERVL 0 444 1 5394 96 11 11 chr5 116107731 116108482 -86977050 - HERVL-A1 LTR ERVL 0 5654 4904 251 167 0 0 chr5 116108511 116108553 -86976979 - THE1-int LTR MaLR -965 615 574 701 324 142 6 chr5 116108686 116109004 -86976528 + LTR16A LTR ERVL 78 438 -12 27 0 0 0 chr5 116110509 116110536 -86974996 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr5 116110628 116110652 -86974880 + AT_rich Low_complexity Low_complexity 1 24 0 201 39 0 0 chr5 116111033 116111059 -86974473 + (CA)n Simple_repeat Simple_repeat 1 26 0 298 133 10 0 chr5 116111069 116111135 -86974397 + L1MC4 LINE L1 1996 6983 -1339 304 256 47 23 chr5 116111156 116111242 -86974290 + L1MC4 LINE L1 6615 6702 -1340 297 300 0 0 chr5 116111260 116111370 -86974162 + (TA)n Simple_repeat Simple_repeat 1 110 0 249 289 39 39 chr5 116111373 116111465 -86974067 + L1MC4 LINE L1 6614 6708 -1334 333 0 0 0 chr5 116111465 116111502 -86974030 + (GA)n Simple_repeat Simple_repeat 2 38 0 249 289 39 39 chr5 116111502 116111537 -86973995 + L1MC4 LINE L1 6707 6741 -1301 198 0 0 0 chr5 116111539 116111561 -86973971 + (TA)n Simple_repeat Simple_repeat 2 23 0 571 105 0 35 chr5 116111589 116111732 -86973800 + (TA)n Simple_repeat Simple_repeat 2 139 0 2738 96 28 8 chr5 116111732 116112128 -86973404 - MLT2A1 LTR ERVL -40 404 1 3188 82 2 5 chr5 116112128 116112565 -86972967 - HERVL-A1 LTR ERVL 0 5654 5219 11845 84 1 0 chr5 116112605 116114136 -86971396 - HERVL-A1 LTR ERVL -3941 1713 182 2612 102 68 19 chr5 116114213 116114260 -86971272 - MLT2A1 LTR ERVL -1 443 400 333 0 0 0 chr5 116114260 116114297 -86971235 + (TA)n Simple_repeat Simple_repeat 1 37 0 2612 102 68 19 chr5 116114297 116114662 -86970870 - MLT2A1 LTR ERVL -44 400 11 267 31 0 0 chr5 116114665 116114697 -86970835 + (CA)n Simple_repeat Simple_repeat 1 32 0 502 128 43 0 chr5 116114699 116114816 -86970716 + (TA)n Simple_repeat Simple_repeat 2 123 0 14551 140 26 76 chr5 116115098 116117970 -86967562 + Tigger4(Zombi) DNA MER2_type 1 2731 0 470 305 28 33 chr5 116119573 116119786 -86965746 + L2 LINE L2 3102 3313 0 240 276 41 0 chr5 116120376 116120474 -86965058 + CT-rich Low_complexity Low_complexity 1 102 0 1660 266 80 49 chr5 116121015 116121789 -86963743 - L1ME2 LINE L1 -47 6117 5368 2020 113 7 10 chr5 116121789 116122089 -86963443 - AluSx SINE Alu -13 299 1 1660 266 80 49 chr5 116122089 116123147 -86962385 - L1ME2 LINE L1 -796 5368 4210 6188 103 4 9 chr5 116123205 116124971 -86960561 + L1PA14 LINE L1 4408 6161 0 25 31 0 0 chr5 116124971 116125003 -86960529 + AT_rich Low_complexity Low_complexity 1 32 0 387 0 0 0 chr5 116125553 116125596 -86959936 + (TA)n Simple_repeat Simple_repeat 2 44 0 1759 165 10 3 chr5 116125901 116126204 -86959328 + AluSx SINE Alu 1 305 -7 12521 91 9 4 chr5 116126487 116128309 -86957223 + L1P LINE L1 2027 3857 -2289 944 113 0 54 chr5 116128307 116128475 -86957057 + L1PA7 LINE L1 2260 2418 -3728 * 10373 84 9 1 chr5 116128475 116130710 -86954822 + L1PA7 LINE L1 3865 6153 -1 323 326 95 52 chr5 116131569 116131894 -86953638 + L3 LINE CR1 1233 1571 -6 200 35 35 0 chr5 116132409 116132438 -86953094 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 21 0 0 0 chr5 116133668 116133689 -86951843 + AT_rich Low_complexity Low_complexity 1 21 0 270 169 13 26 chr5 116134438 116134515 -86951017 + GA-rich Low_complexity Low_complexity 3 78 0 2068 162 68 5 chr5 116134733 116135103 -86950429 - LTR39 LTR ERV1 0 783 391 1625 191 54 54 chr5 116135143 116135403 -86950129 - LTR39 LTR ERV1 -388 395 216 1638 188 14 0 chr5 116135403 116135691 -86949841 + AluJo SINE Alu 1 292 -20 1625 191 54 54 chr5 116135691 116135908 -86949624 - LTR39 LTR ERV1 -567 216 1 200 139 0 105 chr5 116136404 116136490 -86949042 + (TTATA)n Simple_repeat Simple_repeat 2 78 0 23 33 0 0 chr5 116138578 116138608 -86946924 + AT_rich Low_complexity Low_complexity 1 30 0 235 345 26 47 chr5 116140172 116140363 -86945169 - MIR SINE MIR -64 198 12 21 0 0 0 chr5 116140449 116140470 -86945062 + AT_rich Low_complexity Low_complexity 1 21 0 284 296 91 47 chr5 116140494 116140791 -86944741 - L1M4 LINE L1 -1163 4983 4674 418 310 70 0 chr5 116140965 116141094 -86944438 - MIR3 SINE MIR -3 205 68 202 114 29 0 chr5 116141439 116141474 -86944058 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 49 18 0 0 chr5 116141868 116141924 -86943608 + AT_rich Low_complexity Low_complexity 1 56 0 372 296 78 81 chr5 116141953 116142518 -86943014 + L1MEc LINE L1 802 1364 -5032 23 54 0 0 chr5 116142523 116142560 -86942972 + AT_rich Low_complexity Low_complexity 1 37 0 348 331 138 34 chr5 116142583 116142961 -86942571 + L1MEc LINE L1 1340 1756 -4640 2067 49 33 79 chr5 116143613 116143917 -86941615 - AluY SINE Alu -21 290 1 915 224 56 9 chr5 116143922 116144136 -86941396 - MER101B LTR ERV1 -346 224 1 904 264 105 25 chr5 116144994 116145309 -86940223 + MLT2F LTR ERVL 245 584 -79 183 129 0 0 chr5 116145585 116145616 -86939916 + (TG)n Simple_repeat Simple_repeat 2 32 0 1173 253 24 50 chr5 116145881 116146260 -86939272 - MLT1A2 LTR MaLR -4 370 2 9965 56 4 0 chr5 116147129 116149184 -86936348 - L1PA6 LINE L1 -6 6148 4107 9164 98 5 1 chr5 116149185 116150516 -86935016 + L1PA6 LINE L1 2755 4090 -2056 299 333 0 0 chr5 116150695 116150791 -86934741 + MIR SINE MIR 164 259 -3 1908 142 10 7 chr5 116150898 116151242 -86934290 - AluSx SINE Alu 0 312 1 22 35 0 0 chr5 116151552 116151581 -86933951 + AT_rich Low_complexity Low_complexity 1 29 0 613 311 138 23 chr5 116151849 116153160 -86932372 + L1M4 LINE L1 3173 4634 -1512 266 316 82 20 chr5 116153161 116153503 -86932029 + L1M4 LINE L1 4910 5272 -874 25 0 0 0 chr5 116154239 116154264 -86931268 + AT_rich Low_complexity Low_complexity 1 25 0 2062 99 7 7 chr5 116155173 116155476 -86930056 + L1PB1 LINE L1 5830 6132 -19 227 405 79 8 chr5 116155600 116155726 -86929806 + L2 LINE L2 3134 3268 -4 21 0 0 0 chr5 116156278 116156299 -86929233 + AT_rich Low_complexity Low_complexity 1 21 0 1470 240 74 81 chr5 116158508 116159079 -86926453 - MLT1E2 LTR MaLR -8 618 52 28 48 0 0 chr5 116159912 116159954 -86925578 + AT_rich Low_complexity Low_complexity 1 42 0 275 49 24 0 chr5 116160643 116160684 -86924848 + (TG)n Simple_repeat Simple_repeat 2 43 0 26 50 0 0 chr5 116161222 116161262 -86924270 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 116161608 116161632 -86923900 + AT_rich Low_complexity Low_complexity 1 24 0 208 305 73 12 chr5 116162766 116162848 -86922684 + L2 LINE L2 3209 3295 -18 671 269 273 12 chr5 116163527 116164022 -86921510 - LTR50 LTR ERVL -171 624 1 508 255 168 0 chr5 116164671 116164820 -86920712 + FAM SINE Alu 1 174 -11 43 47 0 0 chr5 116164833 116164897 -86920635 + AT_rich Low_complexity Low_complexity 1 64 0 397 270 73 57 chr5 116165204 116165452 -86920080 + HAL1b LINE L1 206 457 -891 21 0 0 0 chr5 116165556 116165577 -86919955 + AT_rich Low_complexity Low_complexity 1 21 0 264 227 45 57 chr5 116166115 116166203 -86919329 - MIR SINE MIR -108 154 68 22 35 0 0 chr5 116166323 116166352 -86919180 + AT_rich Low_complexity Low_complexity 1 29 0 301 230 44 35 chr5 116166851 116166964 -86918568 - MER63 DNA MER1_type -38 1023 910 2697 229 31 18 chr5 116167175 116167790 -86917742 - MER82 DNA MER2_type -29 624 2 228 48 71 24 chr5 116167867 116167909 -86917623 - L1MA5 LINE L1 0 6300 6257 2020 148 50 8 chr5 116167909 116168267 -86917265 + THE1C LTR MaLR 2 374 -1 7257 130 34 28 chr5 116168268 116169462 -86916070 + THE1C-int LTR MaLR 1 1202 -378 2487 98 24 1 chr5 116169462 116169887 -86915645 + LTR12 LTR ERV1 379 714 0 2486 115 8 8 chr5 116169890 116170265 -86915267 + THE1C LTR MaLR 1 375 0 1835 123 54 0 chr5 116170267 116170583 -86914949 - L1MA5A LINE L1 -41 6256 5924 450 272 139 29 chr5 116170578 116170994 -86914538 + L1ME LINE L1 4842 5303 -843 * 611 257 16 6 chr5 116171035 116171218 -86914314 + L1ME LINE L1 5313 5497 -665 325 269 159 73 chr5 116171257 116171502 -86914030 + L2 LINE L2 3029 3294 -19 208 386 85 5 chr5 116171811 116172000 -86913532 + MIR SINE MIR 7 210 -52 2256 97 7 3 chr5 116172649 116172959 -86912573 + AluSq SINE Alu 3 313 0 212 186 17 0 chr5 116173076 116173135 -86912397 + (TA)n Simple_repeat Simple_repeat 1 60 0 12307 243 26 21 chr5 116173174 116178768 -86906764 - L1PB4 LINE L1 -21 6837 1131 334 316 10 0 chr5 116178776 116178874 -86906658 - L1PB4 LINE L1 -6739 110 12 2179 223 22 2 chr5 116179597 116180060 -86905472 - MER70A LTR ERVL 0 472 1 313 269 48 97 chr5 116181371 116181598 -86903934 - L1MC4a LINE L1 -1880 5928 5713 1625 166 85 3 chr5 116181899 116182182 -86903350 - AluJb SINE Alu -5 307 2 26 50 0 0 chr5 116182186 116182226 -86903306 + AT_rich Low_complexity Low_complexity 1 40 0 511 298 66 70 chr5 116182459 116182959 -86902573 - L1MC4a LINE L1 -1088 5058 4561 28 48 0 0 chr5 116183362 116183404 -86902128 + AT_rich Low_complexity Low_complexity 1 42 0 309 51 0 0 chr5 116183627 116183666 -86901866 + (TG)n Simple_repeat Simple_repeat 2 40 0 1636 181 143 34 chr5 116184315 116184546 -86900986 - LTR2B LTR ERV1 0 490 285 180 111 0 0 chr5 116184546 116184573 -86900959 + (CAGAA)n Simple_repeat Simple_repeat 2 28 0 1636 181 143 34 chr5 116184573 116184783 -86900749 - LTR2B LTR ERV1 -205 285 1 1753 151 23 55 chr5 116185285 116185676 -86899856 - MER67C LTR ERV1 -248 266 1 256 319 0 0 chr5 116186514 116186583 -86898949 + (CATA)n Simple_repeat Simple_repeat 3 71 0 26 0 0 0 chr5 116186838 116186864 -86898668 + AT_rich Low_complexity Low_complexity 1 26 0 190 205 24 133 chr5 116186925 116187008 -86898524 - MER5A DNA MER1_type -115 74 1 1846 196 20 18 chr5 116187240 116187632 -86897900 + MSTD LTR MaLR 1 393 -3 24 32 0 0 chr5 116188696 116188727 -86896805 + AT_rich Low_complexity Low_complexity 1 31 0 50 42 0 0 chr5 116188738 116188809 -86896723 + AT_rich Low_complexity Low_complexity 1 71 0 28 0 0 0 chr5 116189330 116189358 -86896174 + AT_rich Low_complexity Low_complexity 1 28 0 985 204 125 15 chr5 116190886 116191150 -86894382 + AluSg SINE Alu 1 293 -7 260 279 79 14 chr5 116191392 116191592 -86893940 - L1MCa LINE L1 -4837 1770 1373 2388 110 26 0 chr5 116192540 116192886 -86892646 - THE1A LTR MaLR 0 355 1 8067 115 13 1 chr5 116192886 116194021 -86891511 - THE1A-int LTR MaLR 0 1580 432 1204 172 65 115 chr5 116194125 116194508 -86891024 - Tigger5 DNA MER2_type -1352 971 608 1686 274 40 0 chr5 116194522 116194942 -86890590 - Tigger5 DNA MER2_type -1886 437 1 2476 163 30 0 chr5 116194942 116195348 -86890184 - MER34 LTR ERV1 -111 431 14 951 256 107 3 chr5 116195746 116196055 -86889477 + MER90 LTR ERV1 3 343 -271 229 143 24 0 chr5 116196055 116196097 -86889435 + MER90 LTR ERV1 572 614 0 193 175 0 35 chr5 116196195 116196252 -86889280 + GA-rich Low_complexity Low_complexity 4 58 0 245 301 125 75 chr5 116197326 116197685 -86887847 - MLT1H LTR MaLR -48 501 125 22 0 0 0 chr5 116197919 116197941 -86887591 + AT_rich Low_complexity Low_complexity 1 22 0 2435 223 89 18 chr5 116201184 116201857 -86883675 - L1MB8 LINE L1 -2 6176 5456 702 321 81 23 chr5 116201957 116202322 -86883210 + L2 LINE L2 2593 2984 -329 679 300 43 0 chr5 116202322 116202555 -86882977 - L2 LINE L2 -1360 1954 1712 21 0 0 0 chr5 116203737 116203758 -86881774 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 116204749 116204778 -86880754 + AT_rich Low_complexity Low_complexity 1 29 0 1713 121 57 8 chr5 116205103 116205368 -86880164 + AluJo SINE Alu 7 284 -28 251 276 62 52 chr5 116205436 116205628 -86879904 + HAL1 LINE L1 2230 2423 -84 197 304 18 0 chr5 116205714 116205765 -86879767 + L2 LINE L2 3252 3303 -10 189 367 16 0 chr5 116205765 116205870 -86879662 + MIR SINE MIR 4 111 -103 396 212 106 26 chr5 116205871 116205984 -86879548 + MER58B DNA MER1_type 209 330 -11 187 244 0 0 chr5 116207305 116207346 -86878186 + L2 LINE L2 3273 3313 0 434 264 56 30 chr5 116207513 116207711 -86877821 - MIR SINE MIR -45 217 16 268 404 14 7 chr5 116208831 116208977 -86876555 + MIR SINE MIR 20 166 -96 725 298 36 8 chr5 116208993 116209245 -86876287 - MIR SINE MIR -2 260 2 348 286 87 0 chr5 116209256 116209382 -86876150 + MIR SINE MIR 116 252 -10 22 35 0 0 chr5 116209382 116209411 -86876121 + AT_rich Low_complexity Low_complexity 1 29 0 263 320 0 0 chr5 116209832 116209907 -86875625 - L3 LINE CR1 -585 992 918 799 236 31 54 chr5 116209916 116210226 -86875306 - MLT2C1 LTR ERVL -8 406 105 1677 167 52 27 chr5 116210226 116210592 -86874940 + THE1C LTR MaLR 1 375 0 799 236 31 54 chr5 116210592 116210693 -86874839 - MLT2C1 LTR ERVL -309 105 3 326 360 0 7 chr5 116210858 116211005 -86874527 - MER69A DNA AcHobo -30 147 2 21 57 0 0 chr5 116211008 116211043 -86874489 + AT_rich Low_complexity Low_complexity 1 35 0 491 383 71 4 chr5 116211050 116211319 -86874213 - L3 LINE CR1 -808 769 483 302 349 108 29 chr5 116211469 116211710 -86873822 + MIR SINE MIR 3 262 0 23 33 0 0 chr5 116211729 116211759 -86873773 + AT_rich Low_complexity Low_complexity 1 30 0 182 304 29 43 chr5 116212201 116212270 -86873262 - L3 LINE CR1 -1315 262 195 279 0 0 0 chr5 116213107 116213138 -86872394 + (CA)n Simple_repeat Simple_repeat 1 31 0 4240 165 52 59 chr5 116213537 116214616 -86870916 + MER11C LTR ERVK 1 1071 0 2205 128 3 0 chr5 116214659 116214971 -86870561 + AluSp SINE Alu 1 313 0 384 246 26 26 chr5 116216664 116216778 -86868754 - LTR40a LTR ERVL -405 114 1 452 294 119 16 chr5 116217979 116218289 -86867243 - L1ME4a LINE L1 -44 6077 5736 342 115 0 0 chr5 116219184 116219236 -86866296 + (TA)n Simple_repeat Simple_repeat 2 53 0 5197 194 35 11 chr5 116220904 116222416 -86863116 + L1MC1 LINE L1 4771 6308 -25 1595 167 51 43 chr5 116223051 116223423 -86862109 - THE1C LTR MaLR 0 375 1 8189 133 83 38 chr5 116223423 116224933 -86860599 - THE1C-int LTR MaLR 0 1580 4 1623 145 116 29 chr5 116224936 116225281 -86860251 - THE1C LTR MaLR 0 375 1 3797 256 92 91 chr5 116225596 116227881 -86857651 - L1MC4a LINE L1 -12 7796 5510 469 333 123 16 chr5 116230508 116230874 -86854658 + LTR16A LTR ERVL 46 450 0 218 227 0 45 chr5 116231593 116231659 -86853873 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 116233481 116233502 -86852030 + AT_rich Low_complexity Low_complexity 1 21 0 1526 223 15 36 chr5 116233815 116234147 -86851385 - MLT2D LTR ERVL 0 414 90 180 97 0 0 chr5 116234147 116234178 -86851354 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 407 204 34 0 chr5 116234181 116234269 -86851263 - MLT2D LTR ERVL -319 95 5 2072 117 0 13 chr5 116235193 116235492 -86850040 + AluSx SINE Alu 3 297 -15 35 0 0 0 chr5 116235499 116235534 -86849998 + AT_rich Low_complexity Low_complexity 1 35 0 2567 26 7 7 chr5 116235585 116235893 -86849639 + AluY SINE Alu 3 310 -1 1532 222 55 24 chr5 116236039 116236422 -86849110 - MLT1C LTR MaLR -71 396 2 983 324 128 7 chr5 116236758 116237187 -86848345 + LTR16C LTR ERVL 1 481 -10 25 31 0 0 chr5 116237763 116237795 -86847737 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr5 116238537 116238573 -86846959 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr5 116238986 116239023 -86846509 + AT_rich Low_complexity Low_complexity 1 37 0 304 310 132 31 chr5 116239317 116239575 -86845957 - L1ME4a LINE L1 -195 5926 5643 264 355 65 0 chr5 116239655 116239762 -86845770 + L3 LINE CR1 1007 1120 -457 278 339 106 50 chr5 116239976 116240042 -86845490 - L3 LINE CR1 -635 942 881 1009 233 94 18 chr5 116240042 116240381 -86845151 + MLT1A1 LTR MaLR 1 365 0 278 339 106 50 chr5 116240381 116240757 -86844775 - L3 LINE CR1 -696 881 475 200 241 17 0 chr5 116240876 116240934 -86844598 + (TAA)n Simple_repeat Simple_repeat 2 60 0 300 87 58 14 chr5 116243144 116243213 -86842319 + CT-rich Low_complexity Low_complexity 4 75 0 250 186 51 17 chr5 116243313 116243372 -86842160 + CT-rich Low_complexity Low_complexity 6 66 0 914 115 0 0 chr5 116243652 116243782 -86841750 - AluSg/x SINE Alu -17 295 166 22 0 0 0 chr5 116246175 116246197 -86839335 + AT_rich Low_complexity Low_complexity 1 22 0 7866 204 117 57 chr5 116247537 116248351 -86837181 - L1MC1 LINE L1 -34 7737 6973 210 71 0 0 chr5 116248351 116248379 -86837153 + (TG)n Simple_repeat Simple_repeat 1 28 0 7866 204 117 57 chr5 116248379 116250837 -86834695 - L1MC1 LINE L1 -798 6973 4284 24 0 0 0 chr5 116250976 116251000 -86834532 + AT_rich Low_complexity Low_complexity 1 24 0 198 380 53 20 chr5 116251388 116251538 -86833994 - MIR3 SINE MIR -38 170 16 1829 203 8 6 chr5 116251587 116251952 -86833580 - MER47A DNA MER2_type 0 366 1 549 265 62 6 chr5 116252528 116252690 -86832842 + MIR SINE MIR 3 173 -89 21 71 0 0 chr5 116252724 116252766 -86832766 + AT_rich Low_complexity Low_complexity 1 42 0 34 72 0 0 chr5 116254038 116254107 -86831425 + AT_rich Low_complexity Low_complexity 1 69 0 24 0 0 0 chr5 116255897 116255921 -86829611 + AT_rich Low_complexity Low_complexity 1 24 0 420 323 39 0 chr5 116256883 116257010 -86828522 + L2 LINE L2 3182 3313 0 350 317 225 0 chr5 116257174 116257436 -86828096 - L2 LINE L2 -37 3276 2956 305 222 16 0 chr5 116257503 116257566 -86827966 - L2 LINE L2 -537 2777 2714 2050 134 0 7 chr5 116257865 116258164 -86827368 + AluSq SINE Alu 1 297 -16 46 19 0 0 chr5 116258273 116258326 -86827206 + AT_rich Low_complexity Low_complexity 1 53 0 1668 182 14 2 chr5 116258454 116258891 -86826641 + LTR19A LTR ERV1 1 480 -6 936 177 13 0 chr5 116258896 116259054 -86826478 + LTR19A-int LTR ERV1 1 160 -5426 35353 164 51 45 chr5 116259054 116266703 -86818829 + HERVFH19I LTR ERV1 21 7719 0 2548 134 92 5 chr5 116266703 116267150 -86818382 + LTR19A LTR ERV1 1 486 0 1135 219 14 0 chr5 116269315 116269593 -86815939 - L1MA4 LINE L1 -6 6294 6013 2224 119 0 0 chr5 116269650 116269961 -86815571 + AluY SINE Alu 1 311 0 846 258 113 12 chr5 116270231 116270479 -86815053 - MLT1E1 LTR MaLR -381 273 1 7580 156 37 12 chr5 116270696 116273147 -86812385 + L1MA1 LINE L1 3796 6302 0 522 258 162 30 chr5 116273223 116273421 -86812111 + MIR SINE MIR 11 234 -28 1360 128 5 0 chr5 116273428 116273631 -86811901 + L1M1 LINE L1 5550 5753 -549 240 364 61 8 chr5 116273923 116274055 -86811477 + L3 LINE CR1 1369 1507 -70 24 100 0 0 chr5 116274153 116274233 -86811299 + AT_rich Low_complexity Low_complexity 1 80 0 24 32 0 0 chr5 116275423 116275454 -86810078 + AT_rich Low_complexity Low_complexity 1 31 0 451 283 47 27 chr5 116275758 116275941 -86809591 - MIR SINE MIR -32 230 45 537 344 76 16 chr5 116277162 116277412 -86808120 + LTR16A LTR ERVL 26 290 -160 2128 124 3 6 chr5 116277554 116277868 -86807664 - AluSq SINE Alu 0 313 1 417 338 13 0 chr5 116277885 116278036 -86807496 - MIR SINE MIR -106 156 4 228 200 0 0 chr5 116278497 116278547 -86806985 + (CA)n Simple_repeat Simple_repeat 2 51 0 351 281 39 65 chr5 116279617 116279770 -86805762 + MER5A DNA MER1_type 35 183 -6 1862 110 0 0 chr5 116281277 116281532 -86804000 + AluSc SINE Alu 1 255 -54 252 130 0 0 chr5 116283066 116283112 -86802420 + LTR66 LTR ERVL 394 439 -171 456 19 0 0 chr5 116283112 116283165 -86802367 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 522 144 72 12 chr5 116283883 116284046 -86801486 - MER5C DNA MER1_type 0 324 94 286 290 0 0 chr5 116284355 116284424 -86801108 + GA-rich Low_complexity Low_complexity 3 71 0 25 31 0 0 chr5 116285465 116285497 -86800035 + AT_rich Low_complexity Low_complexity 1 32 0 476 308 62 31 chr5 116285525 116285752 -86799780 + MIR SINE MIR 16 249 -13 3075 179 11 41 chr5 116285788 116286404 -86799128 - MER7C DNA MER2_type -2 600 3 551 318 35 10 chr5 116287035 116287233 -86798299 + MIR SINE MIR 5 207 -55 812 211 23 18 chr5 116289149 116289355 -86796177 - FRAM SINE Alu 0 176 1 234 174 0 22 chr5 116289673 116289719 -86795813 + GA-rich Low_complexity Low_complexity 2 46 0 378 229 24 0 chr5 116289767 116289850 -86795682 + MIR SINE MIR 123 207 -55 297 0 0 0 chr5 116291235 116291268 -86794264 + (CA)n Simple_repeat Simple_repeat 2 34 0 31 0 0 0 chr5 116292503 116292534 -86792998 + AT_rich Low_complexity Low_complexity 1 31 0 583 169 58 69 chr5 116292555 116292744 -86792788 - MER53 DNA DNA -2 187 1 2286 87 3 0 chr5 116292838 116293136 -86792396 - AluY SINE Alu -12 299 1 396 0 0 0 chr5 116295374 116295418 -86790114 + (CA)n Simple_repeat Simple_repeat 1 44 0 4456 134 89 4 chr5 116296215 116296976 -86788556 + LTR1B LTR ERV1 1 826 0 22 0 0 0 chr5 116297306 116297328 -86788204 + AT_rich Low_complexity Low_complexity 1 22 0 2309 104 0 0 chr5 116300468 116300777 -86784755 - AluSg1 SINE Alu 0 309 1 306 0 0 0 chr5 116300871 116300905 -86784627 + (TA)n Simple_repeat Simple_repeat 1 34 0 267 31 0 0 chr5 116300904 116300936 -86784596 + (GA)n Simple_repeat Simple_repeat 2 33 0 * 2174 108 0 0 chr5 116301292 116301580 -86783952 - AluSg SINE Alu -22 288 1 1442 200 3 32 chr5 116302472 116302782 -86782750 + AluJo SINE Alu 1 301 -11 3230 151 4 11 chr5 116302882 116303413 -86782119 - MER1A DNA MER1_type 0 527 1 684 291 106 20 chr5 116303569 116303823 -86781709 - MLT1I LTR MaLR -34 375 100 5065 143 65 81 chr5 116304882 116305583 -86779949 + Tigger3b DNA MER2_type 5 679 -2349 2360 88 0 0 chr5 116305583 116305891 -86779641 - AluSg SINE Alu -2 308 1 5065 143 65 81 chr5 116305891 116306436 -86779096 + Tigger3b DNA MER2_type 679 1231 0 444 19 0 0 chr5 116307997 116308050 -86777482 + (CA)n Simple_repeat Simple_repeat 2 54 0 279 307 113 62 chr5 116308056 116308330 -86777202 - L2 LINE L2 -93 3220 2933 25 31 0 0 chr5 116309042 116309074 -86776458 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 116309144 116309165 -86776367 + AT_rich Low_complexity Low_complexity 1 21 0 275 258 84 107 chr5 116310477 116310702 -86774830 - MLT1K LTR MaLR -23 565 346 21 82 0 0 chr5 116311136 116311185 -86774347 + AT_rich Low_complexity Low_complexity 1 49 0 608 149 0 9 chr5 116311473 116311587 -86773945 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 2573 23 0 26 chr5 116316993 116317299 -86768233 - AluY SINE Alu -13 298 1 315 267 35 20 chr5 116318010 116318069 -86767463 - MLT1H1 LTR MaLR -2 528 471 1491 188 105 3 chr5 116318069 116318383 -86767149 - MER7A DNA MER2_type -2 344 1 315 267 35 20 chr5 116318383 116318459 -86767073 - MLT1H1 LTR MaLR -59 471 408 231 88 0 0 chr5 116318790 116318824 -86766708 + (GA)n Simple_repeat Simple_repeat 2 35 0 224 195 0 0 chr5 116319106 116319147 -86766385 + CT-rich Low_complexity Low_complexity 1 41 0 204 40 0 0 chr5 116319180 116319205 -86766327 + (T)n Simple_repeat Simple_repeat 1 25 0 495 199 174 50 chr5 116319281 116319442 -86766090 - MLT1G1 LTR MaLR -414 181 1 214 302 186 0 chr5 116320131 116320217 -86765315 + MIR SINE MIR 34 135 -73 230 319 160 8 chr5 116320391 116320510 -86765022 - MIR SINE MIR -5 257 121 12112 214 42 14 chr5 116320533 116323969 -86761563 + L1MA4A LINE L1 11 3348 -3657 2350 130 11 21 chr5 116323969 116324346 -86761186 + THE1C LTR MaLR 3 375 0 12112 214 42 14 chr5 116324346 116327683 -86757849 + L1MA4A LINE L1 3348 6989 -16 29 47 0 0 chr5 116327689 116327732 -86757800 + AT_rich Low_complexity Low_complexity 1 43 0 343 323 46 8 chr5 116328442 116328572 -86756960 - MIR3 SINE MIR -18 190 56 1528 232 25 15 chr5 116329635 116330027 -86755505 + MSTD LTR MaLR 1 396 0 296 237 0 21 chr5 116330741 116330838 -86754694 - L1M4 LINE L1 -414 6581 6487 2215 116 0 0 chr5 116330876 116331178 -86754354 + AluSg SINE Alu 3 304 -6 687 203 0 0 chr5 116331182 116331305 -86754227 - FLAM_A SINE Alu -10 123 1 1204 245 23 0 chr5 116331305 116331607 -86753925 - L1M4 LINE L1 -488 6507 6199 3102 250 97 11 chr5 116331608 116332656 -86752876 - L1M4 LINE L1 -1009 5948 4811 876 288 34 17 chr5 116332697 116333221 -86752311 - L1M4 LINE L1 -2401 4556 4024 21 36 0 0 chr5 116333221 116333249 -86752283 + AT_rich Low_complexity Low_complexity 1 28 0 227 232 71 30 chr5 116333249 116333348 -86752184 - L1M4 LINE L1 -4312 2826 2724 1784 180 42 12 chr5 116333498 116333831 -86751701 + MER2 DNA MER2_type 2 344 0 1552 269 43 18 chr5 116334122 116335020 -86750512 - L1M4 LINE L1 -4701 2258 1343 222 118 0 0 chr5 116335023 116335057 -86750475 + (CATA)n Simple_repeat Simple_repeat 2 35 0 227 169 77 0 chr5 116335058 116335123 -86750409 - L1MCa LINE L1 -4362 2064 1995 256 197 45 0 chr5 116335151 116335217 -86750315 - L1MCa LINE L1 -4363 2063 1995 245 310 0 0 chr5 116335198 116335285 -86750247 + L1MC4 LINE L1 6617 6703 -1339 * 269 287 0 0 chr5 116335262 116335349 -86750183 + L1MC4 LINE L1 6617 6703 -1339 * 271 266 5 17 chr5 116335317 116335435 -86750097 + L1MC4 LINE L1 6614 6703 -1339 414 254 0 0 chr5 116335435 116335561 -86749971 + (TATATG)n Simple_repeat Simple_repeat 2 127 0 2127 109 6 34 chr5 116335569 116335890 -86749642 - AluSx SINE Alu 0 312 1 315 0 0 0 chr5 116336097 116336132 -86749400 + (CA)n Simple_repeat Simple_repeat 2 36 0 2980 269 75 21 chr5 116336154 116337044 -86748488 - L1M4 LINE L1 -5592 1267 330 489 309 85 35 chr5 116337044 116337468 -86748064 + MER65A LTR ERV1 1 445 0 688 231 33 66 chr5 116337468 116337630 -86747902 - L1M4 LINE L1 -6526 333 182 2360 50 0 7 chr5 116337630 116337927 -86747605 + AluY SINE Alu 1 295 -16 688 231 33 66 chr5 116337927 116338037 -86747495 - L1M4 LINE L1 -6677 182 70 234 330 56 39 chr5 116338531 116338742 -86746790 - MIR SINE MIR 0 262 13 1514 227 0 3 chr5 116340225 116340538 -86744994 + AluJo SINE Alu 1 312 0 1459 138 0 0 chr5 116341439 116341664 -86743868 + L1 LINE L1 4058 4282 -1864 225 236 127 0 chr5 116342217 116342272 -86743260 + MLT1I LTR MaLR 280 341 -68 863 199 0 12 chr5 116342488 116342649 -86742883 - FRAM SINE Alu -11 165 7 24 0 0 0 chr5 116342659 116342683 -86742849 + AT_rich Low_complexity Low_complexity 1 24 0 180 302 38 0 chr5 116342985 116343038 -86742494 - MIR SINE MIR 0 262 208 361 399 11 16 chr5 116343042 116343225 -86742307 + MIR SINE MIR 14 195 -67 187 308 92 15 chr5 116343596 116343661 -86741871 - L2 LINE L2 -13 3259 3190 254 341 22 0 chr5 116343744 116343835 -86741697 + MIR SINE MIR 47 139 -123 12957 202 55 11 chr5 116344476 116347732 -86737800 + L1PB1 LINE L1 2 3113 -3754 1882 153 50 36 chr5 116347732 116348091 -86737441 + THE1B LTR MaLR 1 364 0 11419 96 4 9 chr5 116348091 116348521 -86737011 + THE1B-int LTR MaLR 1 432 -1148 1856 183 0 0 chr5 116348521 116348832 -86736700 + AluSq SINE Alu 1 311 -2 11419 96 4 9 chr5 116348832 116349990 -86735542 + THE1B-int LTR MaLR 432 1580 0 2018 143 48 31 chr5 116349990 116350348 -86735184 + THE1B LTR MaLR 1 364 0 12957 202 55 11 chr5 116350348 116353169 -86732363 + L1PB1 LINE L1 3112 6503 -364 180 0 0 0 chr5 116353178 116353198 -86732334 + (TG)n Simple_repeat Simple_repeat 1 20 0 186 103 0 0 chr5 116353198 116353227 -86732305 + (GA)n Simple_repeat Simple_repeat 2 30 0 2583 83 3 29 chr5 116353303 116353323 -86732209 + L1PB1 LINE L1 6490 6509 -358 333 0 0 0 chr5 116353323 116353360 -86732172 + (CA)n Simple_repeat Simple_repeat 1 37 0 2583 83 3 29 chr5 116353360 116353724 -86731808 + L1PB1 LINE L1 6509 6864 -3 30 27 0 0 chr5 116353968 116354005 -86731527 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr5 116354032 116354054 -86731478 + (TG)n Simple_repeat Simple_repeat 1 22 0 1057 277 51 46 chr5 116354592 116354985 -86730547 + MLT1I LTR MaLR 11 405 -4 400 371 15 15 chr5 116355120 116355325 -86730207 - MIR SINE MIR -57 205 1 1852 114 0 4 chr5 116355910 116356226 -86729306 - AluSx SINE Alu 0 345 31 26 30 0 0 chr5 116357137 116357170 -86728362 + AT_rich Low_complexity Low_complexity 1 33 0 251 324 130 19 chr5 116358752 116358860 -86726672 - MIR SINE MIR -116 146 27 2184 109 0 0 chr5 116359350 116359643 -86725889 + AluSx SINE Alu 3 295 -17 1899 163 122 13 chr5 116362942 116363328 -86722204 - MSTA LTR MaLR 0 428 1 445 98 112 0 chr5 116363532 116363631 -86721901 - MER67D LTR ERV1 -361 153 74 2255 115 0 3 chr5 116363631 116363943 -86721589 + AluSx SINE Alu 1 311 -1 325 209 35 0 chr5 116363965 116364051 -86721481 - MER67D LTR ERV1 -425 89 1 238 218 0 0 chr5 116365298 116365353 -86720179 - MIR SINE MIR -88 174 120 30 27 0 0 chr5 116365628 116365665 -86719867 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr5 116365980 116366015 -86719517 + AT_rich Low_complexity Low_complexity 1 35 0 6323 210 51 22 chr5 116366366 116367849 -86717683 + L1PA15-16 LINE L1 1 1432 -5417 274 80 40 0 chr5 116367881 116367931 -86717601 + GA-rich Low_complexity Low_complexity 1 52 0 189 159 0 0 chr5 116368361 116368405 -86717127 + A-rich Low_complexity Low_complexity 5 48 0 22 56 0 0 chr5 116368902 116368938 -86716594 + AT_rich Low_complexity Low_complexity 1 36 0 231 88 0 0 chr5 116369572 116369606 -86715926 + (TG)n Simple_repeat Simple_repeat 1 34 0 1382 78 11 0 chr5 116370408 116370599 -86714933 - L1PA4 LINE L1 -2 6153 5961 22 35 0 0 chr5 116371942 116371971 -86713561 + AT_rich Low_complexity Low_complexity 1 29 0 35 63 0 0 chr5 116372001 116372064 -86713468 + AT_rich Low_complexity Low_complexity 1 63 0 379 224 24 24 chr5 116372064 116372229 -86713303 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 284 145 58 17 chr5 116372231 116372403 -86713129 + (TA)n Simple_repeat Simple_repeat 2 180 0 332 324 45 81 chr5 116373088 116373142 -86712390 - MIR SINE MIR -36 226 172 563 184 14 116 chr5 116373142 116373220 -86712312 + MER53 DNA DNA 4 88 -101 1639 154 55 4 chr5 116373220 116373492 -86712040 - AluJb SINE Alu -25 287 2 563 184 14 116 chr5 116373492 116373620 -86711912 + MER53 DNA DNA 88 189 0 332 324 45 81 chr5 116373620 116373787 -86711745 - MIR SINE MIR -90 172 13 238 358 99 7 chr5 116375297 116375448 -86710084 + L2 LINE L2 2714 2878 -436 258 343 98 0 chr5 116375524 116375626 -86709906 + L2 LINE L2 2930 3041 -231 182 393 36 9 chr5 116376016 116376128 -86709404 + MIR SINE MIR 20 134 -128 488 110 0 12 chr5 116376130 116376212 -86709320 + (GGA)n Simple_repeat Simple_repeat 3 83 0 195 171 0 0 chr5 116376229 116376264 -86709268 + L2 LINE L2 3262 3296 -17 1768 125 44 34 chr5 116377065 116377361 -86708171 + AluSq SINE Alu 1 299 -14 1480 306 153 25 chr5 116377822 116378237 -86707295 + L1MDb LINE L1 22 383 -6026 4734 193 18 7 chr5 116378237 116379128 -86706404 - MER54A LTR ERVL 0 901 1 2250 89 0 7 chr5 116379130 116379432 -86706100 + AluSc SINE Alu 1 300 -9 1480 306 153 25 chr5 116379432 116379767 -86705765 + L1MDb LINE L1 383 871 -5538 3776 212 38 43 chr5 116380049 116381059 -86704473 - L1PA15-16 LINE L1 -4054 2795 1791 434 319 16 74 chr5 116381078 116381388 -86704144 - L1PA15-16 LINE L1 -5886 964 673 326 402 45 25 chr5 116381554 116382064 -86703468 - L1M2 LINE L1 -6320 529 10 337 285 38 38 chr5 116382911 116383097 -86702435 - L1MC4a LINE L1 -1928 5880 5695 1021 132 5 68 chr5 116383102 116383292 -86702240 - AluSc SINE Alu 0 309 132 2253 80 10 7 chr5 116383292 116383615 -86701917 - AluSc SINE Alu 0 309 1 238 328 31 16 chr5 116383681 116383809 -86701723 - L1MC4a LINE L1 -525 5639 5510 42 0 0 0 chr5 116385870 116385912 -86699620 + AT_rich Low_complexity Low_complexity 1 42 0 31 68 0 0 chr5 116385949 116386008 -86699524 + AT_rich Low_complexity Low_complexity 1 59 0 265 327 19 19 chr5 116386021 116386128 -86699404 + L1MC4a LINE L1 4018 4124 -2022 571 68 0 0 chr5 116386277 116386374 -86699158 + L1PA3 LINE L1 10 380 -6081 * 36515 36 32 0 chr5 116386341 116387008 -86698524 + L1PA3 LINE L1 893 1537 -4933 185 0 40 0 chr5 116387008 116387033 -86698499 + (AAATG)n Simple_repeat Simple_repeat 5 30 0 36515 36 32 0 chr5 116387033 116391764 -86693768 + L1PA3 LINE L1 1537 6470 0 192 200 0 0 chr5 116392450 116392495 -86693037 + (TA)n Simple_repeat Simple_repeat 2 46 0 660 281 183 18 chr5 116392697 116393145 -86692387 + L1MC4a LINE L1 5335 5856 -1952 2173 113 0 0 chr5 116393504 116393806 -86691726 - AluSg SINE Alu -2 308 7 23 33 0 0 chr5 116393856 116393886 -86691646 + AT_rich Low_complexity Low_complexity 1 30 0 287 310 20 10 chr5 116394048 116394148 -86691384 + MIR3 SINE MIR 97 197 -11 21 36 0 0 chr5 116394346 116394374 -86691158 + AT_rich Low_complexity Low_complexity 1 28 0 255 296 66 61 chr5 116395209 116395405 -86690127 + MIR SINE MIR 66 262 0 314 284 89 47 chr5 116396056 116396225 -86689307 - MIR SINE MIR -26 236 61 210 375 0 0 chr5 116396253 116396325 -86689207 - L2 LINE L2 -17 3255 3184 240 338 0 0 chr5 116400711 116400779 -86684753 - L3 LINE CR1 -2 1575 1508 2563 194 12 25 chr5 116400839 116401427 -86684105 + L1MB5 LINE L1 5595 6174 0 12829 159 43 26 chr5 116402848 116403523 -86682009 - Tigger1 DNA MER2_type 0 2418 1756 1935 123 11 4 chr5 116403523 116403828 -86681704 - AluSc SINE Alu 0 307 1 12829 159 43 26 chr5 116403828 116405529 -86680003 - Tigger1 DNA MER2_type -662 1756 1 537 115 0 0 chr5 116409950 116410037 -86675495 + (GGA)n Simple_repeat Simple_repeat 2 88 0 314 382 122 0 chr5 116410201 116410332 -86675200 - MER91A DNA MER1_type -48 148 2 833 304 117 7 chr5 116410677 116411095 -86674437 + LTR16B LTR ERVL 1 464 0 450 366 59 15 chr5 116411096 116411500 -86674032 + HERV16 LTR ERVL 2 423 -4573 1596 196 3 26 chr5 116411768 116412079 -86673453 + AluJb SINE Alu 3 306 -6 1887 325 48 14 chr5 116412114 116412914 -86672618 + HERV16 LTR ERVL 755 1581 -3415 432 53 53 0 chr5 116412941 116413016 -86672516 + A-rich Low_complexity Low_complexity 2 80 0 2066 193 25 0 chr5 116413065 116413465 -86672067 + L1PB4 LINE L1 5736 6145 -11 2642 338 52 28 chr5 116413473 116414818 -86670714 + HERV16 LTR ERVL 1714 3090 -1906 2360 136 6 3 chr5 116414986 116415346 -86670186 - THE1B LTR MaLR -1 363 3 672 272 52 86 chr5 116415388 116415656 -86669876 + LTR16B LTR ERVL 25 283 -181 5447 93 3 26 chr5 116415663 116416428 -86669104 + THE1B-int LTR MaLR 834 1580 0 2349 101 27 33 chr5 116416428 116416794 -86668738 + THE1B LTR MaLR 1 364 0 216 182 0 0 chr5 116416911 116416955 -86668577 + (TATATG)n Simple_repeat Simple_repeat 6 49 0 2026 77 0 0 chr5 116417110 116417369 -86668163 + AluY SINE Alu 44 302 -9 270 239 0 0 chr5 116417465 116417557 -86667975 + (TA)n Simple_repeat Simple_repeat 1 92 0 558 211 17 0 chr5 116417684 116417859 -86667673 + (TA)n Simple_repeat Simple_repeat 2 179 0 183 80 0 0 chr5 116417872 116417897 -86667635 + (TATG)n Simple_repeat Simple_repeat 4 28 0 279 153 10 82 chr5 116418044 116418142 -86667390 + L1MC4 LINE L1 6613 6703 -1339 243 220 17 0 chr5 116418143 116418202 -86667330 + (TA)n Simple_repeat Simple_repeat 2 61 0 33 85 0 0 chr5 116418293 116418375 -86667157 + AT_rich Low_complexity Low_complexity 1 82 0 221 154 15 31 chr5 116418457 116418522 -86667010 + T-rich Low_complexity Low_complexity 4 67 0 249 222 0 42 chr5 116418633 116418705 -86666827 - L1MC5 LINE L1 -42 7919 7851 212 188 10 83 chr5 116418801 116418993 -86666539 + (TAA)n Simple_repeat Simple_repeat 3 180 0 202 289 22 0 chr5 116419115 116419160 -86666372 - L3 LINE CR1 -14 1563 1518 257 348 100 9 chr5 116419854 116420023 -86665509 + MIR SINE MIR 42 222 -40 699 172 83 124 chr5 116421020 116421310 -86664222 + LTR37B LTR ERV1 187 464 -4 25 51 0 0 chr5 116422358 116422397 -86663135 + AT_rich Low_complexity Low_complexity 1 39 0 21 71 0 0 chr5 116422463 116422505 -86663027 + AT_rich Low_complexity Low_complexity 1 42 0 257 281 18 92 chr5 116424178 116424342 -86661190 + L2 LINE L2 3161 3312 -1 483 18 0 0 chr5 116424533 116424589 -86660943 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 27 29 0 0 chr5 116424759 116424793 -86660739 + AT_rich Low_complexity Low_complexity 1 34 0 207 281 0 0 chr5 116425596 116425678 -86659854 + GA-rich Low_complexity Low_complexity 1 82 0 38 51 0 0 chr5 116426096 116426155 -86659377 + AT_rich Low_complexity Low_complexity 1 59 0 27 49 0 0 chr5 116426563 116426604 -86658928 + AT_rich Low_complexity Low_complexity 1 41 0 2650 218 51 65 chr5 116427566 116427873 -86657659 + L1MCa LINE L1 34 344 -6082 3323 97 102 43 chr5 116427873 116428449 -86657083 + MER4B LTR ERV1 1 610 0 2650 218 51 65 chr5 116428449 116429933 -86655599 + L1MCa LINE L1 344 1575 -4851 1887 169 0 0 chr5 116429971 116430272 -86655260 - AluSx SINE Alu -11 301 1 303 204 35 148 chr5 116430388 116430530 -86655002 - L1MC3 LINE L1 -1098 6687 6615 3317 211 29 14 chr5 116430570 116431335 -86654197 - L1MC3 LINE L1 -1318 6467 5692 894 231 34 5 chr5 116432385 116432593 -86652939 - MER58A DNA MER1_type 0 224 11 219 186 0 0 chr5 116434124 116434167 -86651365 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 236 30 30 0 chr5 116434288 116434321 -86651211 + (TA)n Simple_repeat Simple_repeat 1 34 0 449 300 50 0 chr5 116434321 116434481 -86651051 + MER58 DNA MER1_type 17 184 -2236 * 551 156 85 35 chr5 116434478 116434619 -86650913 + MER58 DNA MER1_type 2271 2418 -2 1135 243 124 13 chr5 116435038 116435590 -86649942 + MLT1E1 LTR MaLR 1 654 0 964 188 45 0 chr5 116436888 116437064 -86648468 + MER6 DNA MER2_type 1 184 -681 1662 132 7 7 chr5 116437145 116437426 -86648106 + MER6 DNA MER2_type 583 863 -2 31 68 0 0 chr5 116437845 116437904 -86647628 + AT_rich Low_complexity Low_complexity 1 59 0 2624 244 62 12 chr5 116439828 116440649 -86644883 - L1ME2 LINE L1 0 6164 5303 327 25 0 0 chr5 116440713 116440753 -86644779 + (CA)n Simple_repeat Simple_repeat 2 41 0 1452 356 44 45 chr5 116440835 116441779 -86643753 - ERVL LTR ERVL -748 5016 4072 345 62 0 0 chr5 116441779 116441827 -86643705 + (TG)n Simple_repeat Simple_repeat 1 48 0 1452 356 44 45 chr5 116441827 116442132 -86643400 - ERVL LTR ERVL -1692 4072 3768 288 258 34 0 chr5 116442234 116442323 -86643209 - ERVL LTR ERVL -1705 3291 3200 234 0 0 0 chr5 116442686 116442712 -86642820 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2193 207 92 64 chr5 116443077 116443815 -86641717 - LTR1B LTR ERV1 -67 759 1 402 258 55 6 chr5 116444440 116444603 -86640929 + L1MC5 LINE L1 7725 7895 -66 787 267 40 4 chr5 116446809 116447034 -86638498 + MIR SINE MIR 30 262 0 198 103 0 0 chr5 116447415 116447444 -86638088 + (TG)n Simple_repeat Simple_repeat 2 30 0 22 70 0 0 chr5 116447444 116447487 -86638045 + AT_rich Low_complexity Low_complexity 1 43 0 227 380 63 7 chr5 116447611 116447753 -86637779 + MLT1H1 LTR MaLR 67 216 -339 301 247 153 86 chr5 116448087 116448472 -86637060 - L1MC5 LINE L1 -202 7759 7349 421 95 0 0 chr5 116448775 116448838 -86636694 - L1MB3 LINE L1 -4 6179 6117 487 186 49 0 chr5 116448838 116448940 -86636592 - U6 snRNA snRNA 0 107 1 332 320 66 31 chr5 116449183 116449411 -86636121 - L1ME2 LINE L1 -1112 5034 4799 378 306 55 32 chr5 116449602 116449821 -86635711 - L1ME2 LINE L1 -2406 3740 3517 6386 73 5 1 chr5 116451482 116452326 -86633206 + L1PA7 LINE L1 5303 6149 -5 22 70 0 0 chr5 116452605 116452648 -86632884 + AT_rich Low_complexity Low_complexity 1 43 0 2320 132 22 0 chr5 116452693 116453049 -86632483 - THE1B LTR MaLR 0 364 1 183 156 0 0 chr5 116453295 116453327 -86632205 + (TAA)n Simple_repeat Simple_repeat 1 32 0 811 264 14 9 chr5 116504379 116504595 -86580937 + MER20 DNA MER1_type 2 218 -1 1530 138 0 0 chr5 116506382 116506606 -86578926 - AluSg/x SINE Alu -16 294 71 1754 120 0 3 chr5 116506946 116507230 -86578302 + AluYb8 SINE Alu 36 318 0 1812 205 55 0 chr5 116509549 116509934 -86575598 + L1MC1 LINE L1 5668 6073 -260 9430 100 8 10 chr5 116510029 116512215 -86573317 - L1PA7 LINE L1 -3 6151 3969 11544 137 48 15 chr5 116512244 116512852 -86572680 - L1PA7 LINE L1 -3138 3008 2421 207 69 0 0 chr5 116512852 116512881 -86572651 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 11544 137 48 15 chr5 116512881 116514292 -86571240 - L1PA7 LINE L1 -3725 2421 923 1233 63 0 0 chr5 116514289 116514447 -86571085 + L1P3 LINE L1 5454 5611 -543 * 3001 97 29 2 chr5 116514443 116514919 -86570613 + L1P LINE L1 3037 3525 -2621 882 166 30 0 chr5 116514984 116515153 -86570379 - L1MC1 LINE L1 0 6333 6160 1935 9 0 5 chr5 116515253 116515472 -86570060 - AluYb8 SINE Alu -65 253 36 29 0 0 0 chr5 116515510 116515539 -86569993 + AT_rich Low_complexity Low_complexity 1 29 0 2739 275 89 11 chr5 116515655 116516930 -86568602 - L1M4 LINE L1 -2325 3821 2447 22 0 0 0 chr5 116517104 116517126 -86568406 + AT_rich Low_complexity Low_complexity 1 22 0 355 349 30 30 chr5 116517196 116517251 -86568281 - L1MEc LINE L1 -6206 190 136 2724 10 3 0 chr5 116517251 116517556 -86567976 - AluYa5 SINE Alu -5 306 1 355 349 30 30 chr5 116517556 116517669 -86567863 - L1MEc LINE L1 -6259 137 22 483 283 54 21 chr5 116517679 116518015 -86567517 + Charlie2 DNA MER1_type 2484 2830 -32 24 0 0 0 chr5 116518538 116518562 -86566970 + AT_rich Low_complexity Low_complexity 1 24 0 2435 60 0 7 chr5 116518738 116519038 -86566494 + AluY SINE Alu 1 298 -13 529 281 77 14 chr5 116519403 116519692 -86565840 - MLT1G1 LTR MaLR -207 388 70 267 103 0 0 chr5 116520093 116520132 -86565400 + (TG)n Simple_repeat Simple_repeat 1 39 0 23 33 0 0 chr5 116520365 116520395 -86565137 + AT_rich Low_complexity Low_complexity 1 30 0 408 356 77 21 chr5 116522175 116522512 -86563020 + L1MEc LINE L1 11 366 -6030 1072 293 70 49 chr5 116522905 116524064 -86561468 + L1MEc LINE L1 660 1793 -4422 1119 102 57 0 chr5 116524064 116524241 -86561291 + L1MA3 LINE L1 6115 6301 -4 1072 293 70 49 chr5 116524241 116525465 -86560067 + L1MEc LINE L1 1793 3104 -3111 11564 217 40 29 chr5 116525470 116531166 -86554366 + L1PA13 LINE L1 371 6206 -14 584 68 0 0 chr5 116531167 116531272 -86554260 - AluY SINE Alu 0 316 212 205 175 25 0 chr5 116531831 116531871 -86553661 + GA-rich Low_complexity Low_complexity 3 43 0 193 346 20 10 chr5 116533159 116533260 -86552272 - L2 LINE L2 -460 2854 2753 774 356 78 16 chr5 116533679 116534050 -86551482 - LTR16C LTR ERVL -4 487 94 1080 237 19 66 chr5 116534442 116534760 -86550772 + MLT1A1 LTR MaLR 1 373 -55 2114 184 41 12 chr5 116534945 116535363 -86550169 - Tigger2a DNA MER2_type -4 430 1 25 51 0 0 chr5 116535971 116536010 -86549522 + AT_rich Low_complexity Low_complexity 1 39 0 263 337 33 0 chr5 116536930 116537022 -86548510 + MIR SINE MIR 12 106 -156 812 264 168 22 chr5 116537055 116537604 -86547928 - L2 LINE L2 0 3313 2691 591 159 95 8 chr5 116537606 116537732 -86547800 - L1MA7 LINE L1 -147 6144 6008 189 171 0 0 chr5 116537761 116537796 -86547736 + (CATA)n Simple_repeat Simple_repeat 3 37 0 257 314 23 0 chr5 116537861 116537947 -86547585 - L2 LINE L2 -609 2705 2618 627 201 179 11 chr5 116537947 116538065 -86547467 + MER3 DNA MER1_type 1 98 -111 207 0 0 0 chr5 116538065 116538088 -86547444 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 627 201 179 11 chr5 116538088 116538148 -86547384 + MER3 DNA MER1_type 98 209 0 204 267 0 0 chr5 116538371 116538416 -86547116 + (TA)n Simple_repeat Simple_repeat 1 45 0 415 241 28 9 chr5 116538418 116538526 -86547006 - MLT2D LTR ERVL -60 354 245 606 183 122 24 chr5 116539041 116539163 -86546369 + MLT2D LTR ERVL 235 378 -36 267 31 0 0 chr5 116539163 116539195 -86546337 + (CA)n Simple_repeat Simple_repeat 2 33 0 606 183 122 24 chr5 116539195 116539236 -86546296 + MLT2D LTR ERVL 378 414 0 793 338 0 0 chr5 116540481 116540700 -86544832 - HERVL74 LTR ERVL -5050 635 417 473 206 0 49 chr5 116540965 116541067 -86544465 - HERVL74 LTR ERVL -5581 104 8 2000 192 40 24 chr5 116541074 116541527 -86544005 - MER74C LTR ERVL 0 460 1 288 337 53 53 chr5 116541832 116542001 -86543531 - MIR3 SINE MIR -18 190 22 290 214 146 39 chr5 116542215 116542318 -86543214 + L2 LINE L2 2719 2832 -482 220 295 45 89 chr5 116542603 116542715 -86542817 + L2 LINE L2 3199 3305 -8 248 298 43 43 chr5 116542883 116542977 -86542555 + MIR SINE MIR 14 107 -155 21 57 0 0 chr5 116544052 116544087 -86541445 + AT_rich Low_complexity Low_complexity 1 35 0 594 287 81 40 chr5 116545041 116545406 -86540126 + MLT1G LTR MaLR 13 395 -195 250 323 40 0 chr5 116545557 116545681 -86539851 + MLT1G LTR MaLR 462 590 0 3008 57 3 3 chr5 116545758 116546143 -86539389 - L1PA7 LINE L1 -11 6143 5759 250 35 0 0 chr5 116546143 116546172 -86539360 + L1P LINE L1 2467 2495 -3651 272 269 200 19 chr5 116547448 116547608 -86537924 - MIR SINE MIR -8 254 66 22 0 0 0 chr5 116548197 116548219 -86537313 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 116548808 116548838 -86536694 + AT_rich Low_complexity Low_complexity 1 30 0 1133 264 34 80 chr5 116549316 116549855 -86535677 - MLT1H1 LTR MaLR -41 514 3 435 284 82 63 chr5 116550319 116550857 -86534675 + L1MEc LINE L1 1268 1815 -4581 202 250 39 0 chr5 116550878 116550930 -86534602 + GA-rich Low_complexity Low_complexity 6 59 0 258 105 0 0 chr5 116551133 116551171 -86534361 + (TG)n Simple_repeat Simple_repeat 2 39 0 551 156 104 13 chr5 116551253 116551407 -86534125 - Charlie1 DNA MER1_type -1 2760 2593 2060 146 9 0 chr5 116551407 116551736 -86533796 - L1PA16 LINE L1 -439 5727 5396 2404 142 0 67 chr5 116551736 116551820 -86533712 + L1PA16 LINE L1 5744 5832 -334 1958 122 0 4 chr5 116551820 116552090 -86533442 + AluSx SINE Alu 3 271 -41 190 0 0 62 chr5 116552096 116552128 -86533404 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2404 142 0 67 chr5 116552128 116552482 -86533050 + L1PA16 LINE L1 5837 6163 -3 388 300 99 21 chr5 116553358 116553591 -86531941 - L1ME2 LINE L1 -13 6151 5901 557 229 0 59 chr5 116553651 116553804 -86531728 - Charlie1 DNA MER1_type -204 2557 2414 344 275 28 9 chr5 116553850 116553959 -86531573 + MER63 DNA MER1_type 680 1642 -46 243 257 64 127 chr5 116553964 116554435 -86531097 - L1MEd LINE L1 -5084 1035 597 2219 111 19 32 chr5 116554435 116554804 -86530728 + THE1B LTR MaLR 1 364 0 243 257 64 127 chr5 116554804 116554845 -86530687 - L1MEd LINE L1 -5522 597 555 213 39 0 0 chr5 116555178 116555204 -86530328 + (T)n Simple_repeat Simple_repeat 1 26 0 318 250 42 31 chr5 116555241 116555337 -86530195 + L1MC3 LINE L1 6773 6869 -916 * 2822 211 37 96 chr5 116555330 116555365 -86530167 - L1MC3 LINE L1 -477 7588 7552 2576 177 43 4 chr5 116555365 116555829 -86529703 - MER66B LTR ERV1 0 486 5 2822 211 37 96 chr5 116555829 116556493 -86529039 - L1MC3 LINE L1 -513 7552 6907 261 74 0 56 chr5 116556493 116556547 -86528985 - LTR66 LTR ERVL -171 439 389 2822 211 37 96 chr5 116556547 116556790 -86528742 - L1MC3 LINE L1 -1158 6907 6651 30 27 0 0 chr5 116556849 116556886 -86528646 + AT_rich Low_complexity Low_complexity 1 37 0 283 220 0 0 chr5 116556948 116557007 -86528525 - L1MC3 LINE L1 -1420 6645 6587 2071 253 95 47 chr5 116557019 116557958 -86527574 - L1MC3 LINE L1 -743 5683 4791 1820 164 67 21 chr5 116557958 116558331 -86527201 - MLT1B LTR MaLR 0 390 1 2071 253 95 47 chr5 116558331 116559564 -86525968 - L1MC3 LINE L1 -1635 4791 2530 1061 230 98 82 chr5 116559683 116560173 -86525359 - L1MC3 LINE L1 -3983 2443 1962 321 149 60 0 chr5 116560173 116560240 -86525292 - L1MB1 LINE L1 -4 6164 6094 1061 230 98 82 chr5 116560240 116561184 -86524348 - L1MC3 LINE L1 -4464 1962 904 237 241 19 0 chr5 116561262 116561316 -86524216 + CT-rich Low_complexity Low_complexity 4 58 0 33 56 0 0 chr5 116562123 116562177 -86523355 + AT_rich Low_complexity Low_complexity 1 54 0 709 157 0 50 chr5 116564183 116564323 -86521209 + AluJo/FLAM SINE Alu 1 133 -169 244 209 0 0 chr5 116564324 116564367 -86521165 + AluJo/FLAM SINE Alu 129 171 -132 1421 112 5 0 chr5 116564367 116564572 -86520960 + AluSq SINE Alu 107 312 -1 621 340 42 0 chr5 116565072 116565284 -86520248 + MER58A DNA MER1_type 4 224 0 215 266 149 21 chr5 116565299 116565393 -86520139 + MIR3 SINE MIR 66 171 -37 30 45 0 0 chr5 116565538 116565582 -86519950 + AT_rich Low_complexity Low_complexity 1 44 0 285 315 8 8 chr5 116565711 116565838 -86519694 - MER104 DNA Tc2 -5 175 49 313 335 88 47 chr5 116566009 116566179 -86519353 - L2 LINE L2 -1746 1568 1392 2242 114 0 3 chr5 116566550 116566858 -86518674 + AluSc SINE Alu 1 307 -2 230 93 0 47 chr5 116566920 116566963 -86518569 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 967 205 69 109 chr5 116567863 116568239 -86517293 - MER57A LTR ERV1 0 403 43 830 312 22 36 chr5 116568244 116568603 -86516929 - MER57-int LTR ERV1 -390 7147 6794 1000 253 24 73 chr5 116569658 116570066 -86515466 - MER57-int LTR ERV1 -1356 6181 4888 2261 240 55 63 chr5 116570423 116571432 -86514100 - MER57-int LTR ERV1 -1766 5771 4772 284 175 18 0 chr5 116571476 116571533 -86513999 - MER57-int LTR ERV1 -2206 4125 4068 1135 203 25 4 chr5 116572506 116572742 -86512790 + AluJo SINE Alu 1 241 -71 232 290 58 51 chr5 116572817 116572955 -86512577 - L2 LINE L2 -8 3305 3167 21 0 0 0 chr5 116573279 116573300 -86512232 + AT_rich Low_complexity Low_complexity 1 21 0 325 325 36 55 chr5 116575206 116575535 -86509997 + L1MC4a LINE L1 5570 5892 -1916 2145 120 0 10 chr5 116575662 116575961 -86509571 - AluSg SINE Alu -14 296 1 262 231 8 50 chr5 116576865 116576986 -86508546 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 251 297 23 8 chr5 116577032 116577160 -86508372 + (TA)n Simple_repeat Simple_repeat 1 130 0 307 306 37 30 chr5 116577732 116577866 -86507666 - MIR SINE MIR -108 154 20 2759 78 88 7 chr5 116578361 116578732 -86506800 + MLT2A1 LTR ERVL 1 410 -34 248 19 0 75 chr5 116578732 116578785 -86506747 + (TA)n Simple_repeat Simple_repeat 2 50 0 2759 78 88 7 chr5 116578785 116578824 -86506708 + MLT2A1 LTR ERVL 410 444 0 203 292 21 10 chr5 116578880 116578976 -86506556 + (TA)n Simple_repeat Simple_repeat 1 97 0 1306 205 29 35 chr5 116579036 116579415 -86506117 + MLT1D LTR MaLR 1 345 -160 792 198 15 71 chr5 116579437 116579634 -86505898 - MER3 DNA MER1_type 0 209 24 2086 152 74 40 chr5 116580898 116581318 -86504214 - Tigger2a DNA MER2_type 0 434 1 429 179 0 0 chr5 116581477 116581572 -86503960 - L1MA8 LINE L1 -4 6287 6193 624 218 45 19 chr5 116581573 116581729 -86503803 + L1MA7 LINE L1 5914 6073 -218 222 224 0 0 chr5 116581950 116581999 -86503533 - L2 LINE L2 0 3313 3265 359 335 72 29 chr5 116582274 116582483 -86503049 + L2 LINE L2 2143 2360 -954 443 267 102 39 chr5 116583142 116583348 -86502184 - MER20 DNA MER1_type 0 219 1 1773 127 28 0 chr5 116585545 116585836 -86499696 + AluSx SINE Alu 3 301 -11 181 344 0 0 chr5 116587682 116587743 -86497789 - MIR SINE MIR -5 257 197 333 360 5 21 chr5 116587776 116587965 -86497567 - MIR SINE MIR -59 203 18 42248 36 22 1 chr5 116588087 116594113 -86491419 - L1PA2 LINE L1 0 6155 1 21 71 0 0 chr5 116598254 116598296 -86487236 + AT_rich Low_complexity Low_complexity 1 42 0 2378 66 0 7 chr5 116600246 116600551 -86484981 - AluY SINE Alu -5 306 4 15016 173 20 24 chr5 116601379 116605611 -86479921 - L1MA2 LINE L1 0 7723 3508 23 0 0 0 chr5 116605780 116605803 -86479729 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr5 116606014 116606052 -86479480 + AT_rich Low_complexity Low_complexity 1 38 0 1478 289 70 30 chr5 116606144 116606711 -86478821 + MLT1E LTR MaLR 1 590 -3 659 285 141 52 chr5 116607259 116607740 -86477792 - MLT1H1 LTR MaLR 0 555 32 3357 230 35 11 chr5 116608722 116609911 -86475621 - L1M4 LINE L1 -710 5474 4257 359 178 10 148 chr5 116610024 116610275 -86475257 - MER57A-int LTR ERV1 -2232 4099 3844 * 780 224 81 80 chr5 116610270 116610802 -86474730 - MER57A-int LTR ERV1 -2464 2472 1969 444 204 48 29 chr5 116610992 116611095 -86474437 - MER34 LTR ERV1 -305 237 133 962 223 94 47 chr5 116611194 116611660 -86473872 - MER57A-int LTR ERV1 -2784 2087 1072 523 264 152 48 chr5 116612022 116612291 -86473241 - MER57A-int LTR ERV1 -7238 299 3 1039 185 63 145 chr5 116612294 116612550 -86472982 - MER57A LTR ERV1 0 403 189 2217 82 41 7 chr5 116612550 116612842 -86472690 + AluY SINE Alu 1 302 -9 1039 185 63 145 chr5 116612842 116612979 -86472553 - MER57A LTR ERV1 -214 189 42 198 329 14 0 chr5 116613796 116613869 -86471663 - L3 LINE CR1 -465 1112 1039 8328 30 0 0 chr5 116614069 116615062 -86470470 - L1PA2 LINE L1 -1918 4228 3236 9509 33 0 0 chr5 116615062 116617000 -86468532 + L1PA2 LINE L1 4200 6155 0 212 383 58 0 chr5 116617786 116617974 -86467558 - L3 LINE CR1 -717 860 662 22 35 0 0 chr5 116617993 116618022 -86467510 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 116619996 116620021 -86465511 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 116620174 116620202 -86465330 + AT_rich Low_complexity Low_complexity 1 28 0 431 242 141 54 chr5 116620206 116620483 -86465049 - L1ME4a LINE L1 -31 6090 5790 31 88 0 0 chr5 116621689 116621769 -86463763 + AT_rich Low_complexity Low_complexity 1 80 0 431 305 112 21 chr5 116622228 116622461 -86463071 + MIR SINE MIR 9 262 0 439 296 17 23 chr5 116622852 116623028 -86462504 + MER5B DNA MER1_type 4 178 0 24 0 0 0 chr5 116623220 116623244 -86462288 + AT_rich Low_complexity Low_complexity 1 24 0 306 367 94 43 chr5 116624732 116625372 -86460160 + L2 LINE L2 2584 3263 -9 36 97 0 0 chr5 116625520 116625633 -86459899 + AT_rich Low_complexity Low_complexity 1 113 0 2151 126 22 25 chr5 116626351 116626716 -86458816 + THE1B LTR MaLR 1 364 0 31 68 0 0 chr5 116628079 116628138 -86457394 + AT_rich Low_complexity Low_complexity 1 59 0 189 132 0 0 chr5 116628756 116628794 -86456738 + (TG)n Simple_repeat Simple_repeat 1 38 0 1900 222 29 58 chr5 116629497 116630047 -86455485 + MER44D DNA MER2_type 3 591 -14 341 333 145 43 chr5 116630198 116630480 -86455052 - MLT1I LTR MaLR -1 408 98 188 154 19 0 chr5 116631951 116632003 -86453529 + (TA)n Simple_repeat Simple_repeat 1 53 0 21 57 0 0 chr5 116632339 116632374 -86453158 + AT_rich Low_complexity Low_complexity 1 35 0 368 336 21 36 chr5 116632984 116633124 -86452408 + MIR SINE MIR 10 147 -115 44 104 0 0 chr5 116633517 116633680 -86451852 + AT_rich Low_complexity Low_complexity 1 163 0 288 350 58 0 chr5 116633789 116633909 -86451623 - L2 LINE L2 0 3272 3146 214 309 18 0 chr5 116633918 116633973 -86451559 - L2 LINE L2 -20 3252 3197 204 40 0 0 chr5 116634127 116634152 -86451380 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 3606 158 7 0 chr5 116635282 116635889 -86449643 - L1MC1 LINE L1 -9 6324 5714 381 22 0 0 chr5 116636632 116636678 -86448854 + (TG)n Simple_repeat Simple_repeat 2 47 0 24 0 0 0 chr5 116637067 116637091 -86448441 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 116637145 116637167 -86448365 + AT_rich Low_complexity Low_complexity 1 22 0 274 290 20 10 chr5 116638670 116638770 -86446762 - MIR3 SINE MIR -1 207 107 23 33 0 0 chr5 116638811 116638841 -86446691 + AT_rich Low_complexity Low_complexity 1 30 0 1214 218 35 0 chr5 116639289 116639578 -86445954 - L1MD1 LINE L1 0 6242 5944 211 262 165 10 chr5 116639833 116639936 -86445596 + MIR SINE MIR 23 141 -67 220 290 129 11 chr5 116640478 116640571 -86444961 - L2 LINE L2 -1 3312 3209 335 338 50 6 chr5 116641261 116641421 -86444111 + LTR16C LTR ERVL 194 360 -131 409 218 68 30 chr5 116642573 116642706 -86442826 + REP3 LTR ERV 10 147 -415 253 211 64 92 chr5 116642898 116643007 -86442525 + REP3 LTR ERV 385 490 -72 1971 154 116 15 chr5 116643187 116643576 -86441956 + MSTA LTR MaLR 1 428 0 934 345 45 16 chr5 116643844 116644478 -86441054 + L2 LINE L2 2665 3313 0 2280 200 83 16 chr5 116644530 116645096 -86440436 - MER6A DNA MER2_type 0 605 2 26 30 0 0 chr5 116646168 116646201 -86439331 + AT_rich Low_complexity Low_complexity 1 33 0 32 43 0 0 chr5 116647864 116647910 -86437622 + AT_rich Low_complexity Low_complexity 1 46 0 958 252 68 63 chr5 116648408 116648820 -86436712 + MLT1D LTR MaLR 1 414 -91 381 75 0 0 chr5 116648889 116648957 -86436575 + (TCTA)n Simple_repeat Simple_repeat 1 121 0 381 75 0 0 chr5 116648957 116649010 -86436522 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 315 356 59 0 chr5 116649570 116649705 -86435827 + MIR3 SINE MIR 66 208 0 1304 248 72 37 chr5 116650304 116650792 -86434740 + MLT1D LTR MaLR 1 505 0 824 160 53 29 chr5 116651320 116651526 -86434006 - L1MC3 LINE L1 -9 7776 7566 1930 262 46 18 chr5 116651532 116652208 -86433324 + L1M4 LINE L1 4459 5153 -993 463 298 135 0 chr5 116652798 116652976 -86432556 + MIR SINE MIR 2 203 -59 1733 167 20 3 chr5 116654110 116654415 -86431117 + AluJb SINE Alu 1 310 -2 2333 77 0 0 chr5 116654857 116655144 -86430388 - AluY SINE Alu -24 287 1 1976 134 7 0 chr5 116655175 116655482 -86430050 + AluSx SINE Alu 1 309 -3 1757 139 72 31 chr5 116655642 116656002 -86429530 - THE1C LTR MaLR 0 375 1 2082 140 0 13 chr5 116656552 116656859 -86428673 + AluSx SINE Alu 1 303 -9 2061 164 24 51 chr5 116657103 116657157 -86428375 - LTR10E LTR ERV1 0 591 537 2388 91 0 0 chr5 116657157 116657465 -86428067 + AluY SINE Alu 1 308 -3 2061 164 24 51 chr5 116657465 116657984 -86427548 - LTR10E LTR ERV1 -54 537 1 21 0 0 0 chr5 116658752 116658773 -86426759 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr5 116660286 116660322 -86425210 + AT_rich Low_complexity Low_complexity 1 36 0 31 0 0 0 chr5 116660443 116660474 -86425058 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 116662198 116662230 -86423302 + AT_rich Low_complexity Low_complexity 1 32 0 340 346 31 31 chr5 116662602 116662729 -86422803 - L2 LINE L2 -1 3271 3145 27 62 0 0 chr5 116662776 116662824 -86422708 + AT_rich Low_complexity Low_complexity 1 48 0 28 86 0 0 chr5 116663381 116663451 -86422081 + AT_rich Low_complexity Low_complexity 1 70 0 335 307 64 14 chr5 116665359 116665499 -86420033 + MIR SINE MIR 20 166 -96 2095 116 7 0 chr5 116665567 116665861 -86419671 - AluSx SINE Alu -3 309 14 591 272 7 143 chr5 116666368 116666647 -86418885 - MIR SINE MIR -1 261 21 259 301 0 0 chr5 116666695 116666768 -86418764 - L1MC/D LINE L1 -2048 5760 5688 258 220 0 0 chr5 116667040 116667099 -86418433 - MER53 DNA DNA 0 189 131 301 194 56 0 chr5 116667125 116667197 -86418335 - MER53 DNA DNA -113 76 1 1633 198 49 0 chr5 116669251 116669579 -86415953 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr5 116670696 116670717 -86414815 + AT_rich Low_complexity Low_complexity 1 21 0 452 322 47 38 chr5 116671300 116671617 -86413915 + L1MC/D LINE L1 5404 5723 -2085 191 125 25 0 chr5 116672611 116672651 -86412881 + CT-rich Low_complexity Low_complexity 2 42 0 202 280 240 0 chr5 116673419 116673494 -86412038 + L3 LINE CR1 1250 1342 -235 2268 92 3 19 chr5 116674961 116675276 -86410256 - AluSx SINE Alu -2 310 1 355 275 109 97 chr5 116675485 116676008 -86409524 + L1ME LINE L1 204 634 -5571 559 288 109 15 chr5 116676028 116676302 -86409230 + L2 LINE L2 1194 1493 -1821 * 2458 299 94 30 chr5 116676273 116677400 -86408132 + L2 LINE L2 1739 2937 -377 444 278 28 35 chr5 116677435 116677579 -86407953 + L2 LINE L2 3171 3313 0 27 87 0 0 chr5 116680090 116680159 -86405373 + AT_rich Low_complexity Low_complexity 1 69 0 1939 147 3 16 chr5 116680357 116680671 -86404861 + AluSx SINE Alu 3 312 0 8597 156 10 48 chr5 116680673 116681704 -86403828 - L1P LINE L1 -1145 5001 4061 2190 97 0 61 chr5 116681704 116682033 -86403499 - AluSq SINE Alu -4 309 1 8597 156 10 48 chr5 116682033 116682724 -86402808 - L1P LINE L1 -2085 4061 3345 5675 117 17 1 chr5 116682724 116683836 -86401696 + L1PA13 LINE L1 5050 6162 -1 404 316 129 33 chr5 116683853 116684607 -86400925 + L1ME LINE L1 991 1816 -4580 32 67 0 0 chr5 116684624 116684684 -86400848 + AT_rich Low_complexity Low_complexity 1 60 0 338 286 25 25 chr5 116684820 116684981 -86400551 + L1ME LINE L1 2111 2271 -4125 1082 129 105 24 chr5 116684981 116685190 -86400342 + AluSg/x SINE Alu 84 309 -3 290 217 24 0 chr5 116685228 116685311 -86400221 + (TA)n Simple_repeat Simple_repeat 2 86 0 2324 49 0 3 chr5 116685354 116685640 -86399892 + AluY SINE Alu 1 285 -26 230 269 62 15 chr5 116685664 116685794 -86399738 + L1ME LINE L1 2353 2488 -3727 215 140 20 0 chr5 116685877 116685927 -86399605 + GA-rich Low_complexity Low_complexity 2 52 0 1198 289 67 32 chr5 116685970 116686841 -86398691 + L1ME LINE L1 2650 3550 -2665 538 301 4 20 chr5 116687050 116687296 -86398236 + L1ME LINE L1 3605 3846 -2369 594 277 102 57 chr5 116687331 116688053 -86397479 + L1ME LINE L1 3911 4665 -1550 329 198 198 10 chr5 116688625 116688721 -86396811 + MER81 DNA DNA 1 114 0 787 259 161 36 chr5 116688759 116689200 -86396332 + MLT1G LTR MaLR 95 590 0 369 0 0 0 chr5 116689319 116689360 -86396172 + (TG)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 116689643 116689664 -86395868 + AT_rich Low_complexity Low_complexity 1 21 0 1147 195 52 4 chr5 116692027 116692299 -86393233 + L1 LINE L1 3731 4015 -2131 * 6540 161 27 9 chr5 116692291 116692833 -86392699 + L1PB2 LINE L1 3856 4386 -1765 237 65 0 0 chr5 116692833 116692864 -86392668 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 6540 161 27 9 chr5 116692864 116694573 -86390959 + L1PB2 LINE L1 4386 6149 -2 189 297 40 0 chr5 116695074 116695148 -86390384 + MIR SINE MIR 166 242 -20 684 221 0 0 chr5 116696028 116696159 -86389373 - Tigger3(Golem) DNA MER2_type -14 3015 2885 506 304 0 7 chr5 116696203 116696341 -86389191 + MLT1L LTR MaLR 315 451 -164 1251 333 13 22 chr5 116696378 116696825 -86388707 + L2 LINE L2 2476 2918 -396 24 0 0 0 chr5 116696855 116696879 -86388653 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 116697557 116697578 -86387954 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 116699052 116699074 -86386458 + AT_rich Low_complexity Low_complexity 1 22 0 533 120 11 0 chr5 116699812 116699904 -86385628 + (CA)n Simple_repeat Simple_repeat 1 93 0 29 0 0 0 chr5 116700839 116700868 -86384664 + AT_rich Low_complexity Low_complexity 1 29 0 3886 150 44 4 chr5 116701121 116701823 -86383709 - Tigger3(Golem) DNA MER2_type -14 3015 2286 333 250 40 0 chr5 116701826 116701902 -86383630 - Tigger3(Golem) DNA MER2_type -2949 80 2 284 175 16 0 chr5 116701911 116701974 -86383558 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 28 71 0 0 chr5 116702027 116702083 -86383449 + AT_rich Low_complexity Low_complexity 1 56 0 586 216 17 0 chr5 116702138 116702254 -86383278 - MER2 DNA MER2_type -224 121 4 192 97 0 0 chr5 116702572 116702603 -86382929 + (TG)n Simple_repeat Simple_repeat 2 32 0 539 320 30 15 chr5 116704301 116704504 -86381028 - MIR SINE MIR -8 254 49 340 224 32 8 chr5 116704609 116704734 -86380798 + (TA)n Simple_repeat Simple_repeat 1 128 0 1998 203 72 8 chr5 116704856 116705344 -86380188 - L1MA9 LINE L1 0 6312 5794 249 57 0 0 chr5 116705344 116705379 -86380153 + (TG)n Simple_repeat Simple_repeat 2 36 0 984 172 9 62 chr5 116705385 116705492 -86380040 + L1 LINE L1 5062 5152 -994 1912 168 0 3 chr5 116705492 116705790 -86379742 + AluSx SINE Alu 1 297 -15 984 172 9 62 chr5 116705790 116705909 -86379623 + L1 LINE L1 5152 5276 -870 547 140 20 0 chr5 116706609 116706709 -86378823 - L1MA4 LINE L1 -6 6294 6193 26 0 0 0 chr5 116707653 116707679 -86377853 + AT_rich Low_complexity Low_complexity 1 26 0 310 235 94 0 chr5 116708601 116708686 -86376846 - MLT1H1 LTR MaLR 0 555 463 286 314 49 0 chr5 116708736 116708838 -86376694 - MLT1G1 LTR MaLR -183 412 306 338 315 81 20 chr5 116708883 116709032 -86376500 - MLT1G1 LTR MaLR -293 302 145 396 297 18 0 chr5 116709066 116709177 -86376355 + MER81 DNA DNA 2 114 0 5467 198 22 28 chr5 116709873 116710699 -86374833 - L1MC1 LINE L1 -17 6596 5767 2680 102 6 0 chr5 116710699 116711061 -86374471 - THE1B LTR MaLR 0 364 1 5467 198 22 28 chr5 116711061 116711610 -86373922 - L1MC1 LINE L1 -846 5767 5213 333 0 0 0 chr5 116711610 116711647 -86373885 + (TG)n Simple_repeat Simple_repeat 2 38 0 5467 198 22 28 chr5 116711647 116711919 -86373613 - L1MC1 LINE L1 -1400 5213 4941 8678 227 84 19 chr5 116711922 116713903 -86371629 - L1MC1 LINE L1 -1971 4455 2604 1923 165 10 0 chr5 116713903 116714200 -86371332 + 7SLRNA srpRNA srpRNA 1 300 -20 8678 227 84 19 chr5 116714200 116714227 -86371305 - L1MC1 LINE L1 -3822 2604 2580 600 119 0 0 chr5 116714227 116714336 -86371196 + (TA)n Simple_repeat Simple_repeat 1 109 0 8678 227 84 19 chr5 116714336 116716495 -86369037 - L1MC1 LINE L1 -3846 2580 16 4315 285 70 23 chr5 116716592 116718765 -86366767 + L1M3c LINE L1 5 2036 -4175 5560 205 50 56 chr5 116718811 116720564 -86364968 + L1M3c LINE L1 2810 4552 -1658 390 129 0 0 chr5 116720575 116720637 -86364895 + (TA)n Simple_repeat Simple_repeat 1 62 0 510 196 0 0 chr5 116720668 116720760 -86364772 + L1M3c LINE L1 4570 4661 -1549 395 123 0 0 chr5 116720781 116720838 -86364694 + L1M3c LINE L1 4962 5018 -1192 10845 204 40 14 chr5 116720897 116724476 -86361056 + L1M1 LINE L1 2473 6144 -1421 626 131 8 8 chr5 116724481 116724603 -86360929 + L1M LINE L1 6681 6802 -917 719 67 0 0 chr5 116725895 116725999 -86359533 - AluSg/x SINE Alu 0 312 209 232 300 63 117 chr5 116726437 116726754 -86358778 + L2 LINE L2 2455 2754 -560 2085 200 109 19 chr5 116726950 116727426 -86358106 - MER101B LTR ERV1 -51 519 1 259 369 27 18 chr5 116727751 116727862 -86357670 + L2 LINE L2 3160 3271 -1 1414 225 16 55 chr5 116730688 116731128 -86354404 + L1MA9 LINE L1 5852 6274 -38 24 32 0 0 chr5 116731235 116731266 -86354266 + AT_rich Low_complexity Low_complexity 1 31 0 211 330 87 19 chr5 116731270 116731373 -86354159 - L2 LINE L2 0 3272 3163 425 51 0 0 chr5 116732825 116732884 -86352648 + L1PA14 LINE L1 6101 6159 -2 273 304 32 40 chr5 116732907 116733032 -86352500 + MIR SINE MIR 20 143 -119 24 0 0 0 chr5 116734128 116734152 -86351380 + AT_rich Low_complexity Low_complexity 1 24 0 181 256 64 0 chr5 116734521 116734599 -86350933 + MER5C DNA MER1_type 223 305 -19 244 295 0 0 chr5 116735046 116735107 -86350425 - MER102a DNA MER1_type -1 340 280 201 293 35 0 chr5 116735374 116735432 -86350100 - L2 LINE L2 0 3272 3213 269 358 95 0 chr5 116735602 116735750 -86349782 + MER20 DNA MER1_type 52 213 -6 2184 345 152 23 chr5 116735754 116737683 -86347849 + L2 LINE L2 800 2977 -337 229 282 167 45 chr5 116738536 116738692 -86346840 - L2 LINE L2 -452 2862 2688 509 259 15 49 chr5 116738882 116739087 -86346445 - L1M4 LINE L1 -2192 3954 3757 1867 96 6 81 chr5 116739098 116739430 -86346102 - AluY SINE Alu -4 307 1 215 205 0 0 chr5 116739444 116739483 -86346049 + (TG)n Simple_repeat Simple_repeat 2 40 0 317 312 70 23 chr5 116739647 116739862 -86345670 - L1MEc LINE L1 -5382 1014 790 23 33 0 0 chr5 116740218 116740248 -86345284 + AT_rich Low_complexity Low_complexity 1 30 0 237 98 0 0 chr5 116740398 116740439 -86345093 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 245 273 0 116 chr5 116741016 116741137 -86344395 - MER102a DNA MER1_type -3 327 221 24 0 0 0 chr5 116741142 116741166 -86344366 + AT_rich Low_complexity Low_complexity 1 24 0 298 336 10 10 chr5 116741229 116741333 -86344199 - MIR3 SINE MIR -49 159 56 311 221 115 48 chr5 116741637 116741741 -86343791 + MLT1C LTR MaLR 1 111 -356 2893 157 29 2 chr5 116741741 116742220 -86343312 + LOR1a LTR ERV1 6 497 0 1251 251 46 22 chr5 116742220 116742574 -86342958 + MLT1C LTR MaLR 105 467 0 37 62 0 0 chr5 116743312 116743377 -86342155 + AT_rich Low_complexity Low_complexity 1 65 0 184 322 96 0 chr5 116744089 116744204 -86341328 - MIR SINE MIR -14 248 123 1588 220 48 75 chr5 116744249 116744812 -86340720 - LTR55 LTR ERV 0 548 1 196 269 0 19 chr5 116745221 116745264 -86340268 + MIR3 SINE MIR 154 197 -11 2420 53 3 31 chr5 116745264 116745582 -86339950 + AluY SINE Alu 1 309 -2 22 0 0 0 chr5 116748117 116748139 -86337393 + AT_rich Low_complexity Low_complexity 1 22 0 2332 100 0 0 chr5 116748989 116749300 -86336232 - AluSx SINE Alu -1 311 1 263 232 44 94 chr5 116749437 116749618 -86335914 + Charlie7 DNA MER1_type 2433 2604 -8 4962 141 85 56 chr5 116750059 116751175 -86334357 + MER52C LTR ERV1 1 1149 -129 1124 120 0 0 chr5 116751177 116751335 -86334197 + AluSx SINE Alu 1 158 -154 369 162 0 0 chr5 116751343 116751411 -86334121 + (TA)n Simple_repeat Simple_repeat 1 68 0 904 142 0 0 chr5 116751414 116751548 -86333984 + AluSx SINE Alu 158 291 -21 863 113 0 23 chr5 116751549 116751682 -86333850 + MER52C LTR ERV1 1149 1278 0 2059 132 0 22 chr5 116751955 116752274 -86333258 + AluSx SINE Alu 1 312 0 297 75 0 0 chr5 116752285 116752304 -86333228 + (CA)n Simple_repeat Simple_repeat 1 59 0 297 75 0 0 chr5 116752304 116752344 -86333188 + (CA)n Simple_repeat Simple_repeat 2 41 0 180 77 0 0 chr5 116752397 116752423 -86333109 + (CA)n Simple_repeat Simple_repeat 2 27 0 1062 182 193 38 chr5 116752508 116752772 -86332760 + MER77 LTR ERV1 297 601 -4 213 39 0 0 chr5 116753821 116753847 -86331685 + (TA)n Simple_repeat Simple_repeat 1 26 0 392 336 116 15 chr5 116753866 116754134 -86331398 - L1ME4a LINE L1 -225 5896 5602 482 303 39 39 chr5 116754506 116754684 -86330848 - MIR SINE MIR -73 189 12 200 345 22 43 chr5 116755407 116755546 -86329986 + MIR3 SINE MIR 62 197 -11 536 353 31 35 chr5 116756017 116756272 -86329260 - MIR SINE MIR -1 261 8 213 175 0 0 chr5 116756295 116756335 -86329197 + G-rich Low_complexity Low_complexity 3 42 0 24 32 0 0 chr5 116756646 116756677 -86328855 + AT_rich Low_complexity Low_complexity 1 31 0 243 0 0 0 chr5 116757829 116757856 -86327676 + (A)n Simple_repeat Simple_repeat 1 27 0 736 292 68 28 chr5 116758164 116758414 -86327118 + MLT1H1 LTR MaLR 7 266 -289 27 29 0 0 chr5 116759049 116759083 -86326449 + AT_rich Low_complexity Low_complexity 1 34 0 24 77 0 0 chr5 116759513 116759565 -86325967 + AT_rich Low_complexity Low_complexity 1 52 0 740 317 26 0 chr5 116759829 116760056 -86325476 + MIR SINE MIR 29 261 -1 25 31 0 0 chr5 116761479 116761511 -86324021 + AT_rich Low_complexity Low_complexity 1 32 0 563 269 144 10 chr5 116762229 116762430 -86323102 - MIR SINE MIR -21 241 14 435 291 37 8 chr5 116763457 116763591 -86321941 - MIR SINE MIR -69 193 56 228 346 0 0 chr5 116764608 116764689 -86320843 + MLT1J1 LTR MaLR 72 152 -294 515 318 28 48 chr5 116764696 116764985 -86320547 + MLT1J LTR MaLR 229 511 0 312 277 96 11 chr5 116766164 116766258 -86319274 + L2 LINE L2 3171 3272 0 200 94 31 0 chr5 116766273 116766305 -86319227 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 406 233 33 0 chr5 116766875 116766965 -86318567 + L1MC1 LINE L1 6224 6316 -17 295 256 60 45 chr5 116766976 116767109 -86318423 + L2 LINE L2 3150 3284 -29 6833 226 49 21 chr5 116767323 116768973 -86316559 + MER70A-int LTR ERVL 834 2530 -2493 1529 228 18 15 chr5 116768974 116769308 -86316224 + MER70A-int LTR ERVL 3262 3596 -1427 2078 233 28 25 chr5 116770001 116770571 -86314961 + MER70A-int LTR ERVL 4450 5021 -2 1460 257 30 18 chr5 116770585 116770982 -86314550 + MER70A LTR ERVL 4 405 -67 2441 72 0 0 chr5 116771446 116771751 -86313781 - AluY SINE Alu -6 305 1 35 41 0 0 chr5 116771834 116771883 -86313649 + AT_rich Low_complexity Low_complexity 1 49 0 225 206 33 60 chr5 116772043 116772227 -86313305 + (TA)n Simple_repeat Simple_repeat 2 180 0 15683 147 37 39 chr5 116772824 116774315 -86311217 + Tigger3(Golem) DNA MER2_type 2 1495 -1534 1780 142 40 7 chr5 116774315 116774617 -86310915 - AluSq SINE Alu -1 312 1 15683 147 37 39 chr5 116774617 116775746 -86309786 + Tigger3(Golem) DNA MER2_type 1495 2615 -414 2258 107 0 0 chr5 116775746 116776046 -86309486 - AluSx SINE Alu -11 301 2 15683 147 37 39 chr5 116776046 116776460 -86309072 + Tigger3(Golem) DNA MER2_type 2615 3029 0 306 0 0 0 chr5 116776463 116776497 -86309035 + (CA)n Simple_repeat Simple_repeat 2 35 0 397 313 62 62 chr5 116778805 116779080 -86306452 - L1ME4a LINE L1 -284 5837 5563 1395 183 3 70 chr5 116779133 116779445 -86306087 + AluJo SINE Alu 1 291 -11 23 0 0 0 chr5 116779967 116779990 -86305542 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr5 116780265 116780310 -86305222 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr5 116780672 116780697 -86304835 + AT_rich Low_complexity Low_complexity 1 25 0 16956 31 3 0 chr5 116780931 116783722 -86301810 - L1PA4 LINE L1 -2 6153 3357 690 266 65 0 chr5 116784836 116785035 -86300497 + MIR SINE MIR 45 256 -6 2115 132 98 0 chr5 116785274 116785599 -86299933 - LTR18A LTR ERVL 0 357 1 549 196 0 0 chr5 116785885 116785987 -86299545 - HERVL18 LTR ERVL 0 6047 5946 322 271 0 0 chr5 116785987 116786046 -86299486 - HERVL18 LTR ERVL -780 5267 5209 602 141 22 0 chr5 116786046 116786138 -86299394 - HERVL18 LTR ERVL -1559 4488 4395 5354 175 6 2 chr5 116786141 116787000 -86298532 - HERVL18 LTR ERVL -2468 3579 2718 1448 112 22 2 chr5 116786997 116787268 -86298264 - HERVL18 LTR ERVL -3595 2452 2119 * 1943 215 36 11 chr5 116787267 116787874 -86297658 - HERVL18 LTR ERVL -4237 1810 1124 1581 224 0 27 chr5 116787877 116788208 -86297324 - HERVL18 LTR ERVL -5631 416 95 2500 128 17 0 chr5 116788232 116788583 -86296949 - LTR18A LTR ERVL 0 357 1 1498 171 4 8 chr5 116788619 116788882 -86296650 - MER50 LTR ERV1 -37 697 436 1103 111 120 44 chr5 116788878 116789103 -86296429 - MER50 LTR ERV1 -492 242 1 * 1120 304 118 11 chr5 116789205 116789672 -86295860 + LTR40a LTR ERVL 3 519 0 2548 201 46 49 chr5 116790619 116791251 -86294281 + L1MB7 LINE L1 4882 5501 -683 1760 210 87 20 chr5 116791251 116791689 -86293843 + MLT1C LTR MaLR 1 467 0 2548 201 46 49 chr5 116791689 116792086 -86293446 + L1MB7 LINE L1 5501 5898 -286 3733 167 7 15 chr5 116792095 116792554 -86292978 - LTR9 LTR ERV1 0 612 158 2061 129 0 10 chr5 116792554 116792892 -86292640 - AluSx SINE Alu 0 312 3 3733 167 7 15 chr5 116792892 116793048 -86292484 - LTR9 LTR ERV1 -454 158 2 3575 141 14 16 chr5 116793049 116793622 -86291910 - HUERS-P3 LTR ERV1 -1 8918 8347 786 140 0 0 chr5 116793615 116793729 -86291803 - HUERS-P3 LTR ERV1 -6342 2577 2464 * 11482 155 15 23 chr5 116793788 116796260 -86289272 - HUERS-P3 LTR ERV1 -5787 1631 22 1043 159 18 0 chr5 116796282 116796452 -86289080 - LTR9 LTR ERV1 0 612 440 * 3422 140 8 0 chr5 116796442 116796942 -86288590 - LTR9 LTR ERV1 -108 504 1 715 205 164 16 chr5 116796943 116797187 -86288345 + L1MB7 LINE L1 5905 6184 0 313 344 5 73 chr5 116797407 116797599 -86287933 + L1ME LINE L1 339 517 -5553 350 275 71 33 chr5 116797708 116797948 -86287584 + L1ME LINE L1 535 783 -5287 418 150 0 12 chr5 116797949 116798029 -86287503 + AluS SINE Alu 224 302 -8 3890 286 64 15 chr5 116798118 116800037 -86285495 - L1M4 LINE L1 -1528 4618 2605 669 292 0 0 chr5 116800044 116800246 -86285286 - L1M4 LINE L1 -3623 2523 2322 183 402 47 9 chr5 116800786 116800893 -86284639 + MIR SINE MIR 20 130 -78 1844 94 15 25 chr5 116801053 116801461 -86284071 - MLT2A2 LTR ERVL 0 554 149 2210 118 39 22 chr5 116801461 116801746 -86283786 + THE1B LTR MaLR 1 295 -69 2137 123 3 0 chr5 116801746 116802048 -86283484 - AluSq SINE Alu -10 303 1 2210 118 39 22 chr5 116802048 116802118 -86283414 + THE1B LTR MaLR 295 362 -2 1844 94 15 25 chr5 116802118 116802266 -86283266 - MLT2A2 LTR ERVL -405 149 1 28 48 0 0 chr5 116803191 116803233 -86282299 + AT_rich Low_complexity Low_complexity 1 42 0 35 71 0 0 chr5 116803287 116803357 -86282175 + AT_rich Low_complexity Low_complexity 1 70 0 210 71 0 0 chr5 116803666 116803694 -86281838 + (TC)n Simple_repeat Simple_repeat 1 28 0 1102 168 31 16 chr5 116806139 116806330 -86279202 - AluJo SINE Alu -30 282 89 321 135 0 0 chr5 116807291 116807343 -86278189 + (TA)n Simple_repeat Simple_repeat 1 52 0 1984 120 0 0 chr5 116807725 116808001 -86277531 + AluSx SINE Alu 1 276 -36 28 0 0 0 chr5 116808112 116808140 -86277392 + AT_rich Low_complexity Low_complexity 1 28 0 32 57 0 0 chr5 116808800 116808853 -86276679 + AT_rich Low_complexity Low_complexity 1 53 0 426 341 115 7 chr5 116809722 116810009 -86275523 + L3b LINE CR1 1183 1500 -83 355 288 13 10 chr5 116810171 116810329 -86275203 + MIR SINE MIR 8 214 -48 1467 219 30 0 chr5 116810458 116810791 -86274741 - L1MC1 LINE L1 0 6333 5991 241 395 23 12 chr5 116812213 116812299 -86273233 + L2 LINE L2 3134 3220 -52 2034 100 52 7 chr5 116812354 116812644 -86272888 - AluSg SINE Alu -7 303 1 189 0 0 0 chr5 116813304 116813325 -86272207 + (A)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr5 116815825 116815862 -86269670 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 116816037 116816059 -86269473 + AT_rich Low_complexity Low_complexity 1 22 0 1804 131 34 17 chr5 116816269 116816566 -86268966 + AluSq SINE Alu 1 302 -11 396 88 0 0 chr5 116816569 116816626 -86268906 + (GA)n Simple_repeat Simple_repeat 2 58 0 27 29 0 0 chr5 116816896 116816930 -86268602 + AT_rich Low_complexity Low_complexity 1 34 0 2106 133 21 24 chr5 116818043 116818419 -86267113 - THE1C LTR MaLR 0 375 1 616 301 82 37 chr5 116819310 116819363 -86266169 + L1MEc LINE L1 1084 1133 -5263 1720 175 3 3 chr5 116819363 116819649 -86265883 + AluJb SINE Alu 1 286 -26 616 301 82 37 chr5 116819649 116820265 -86265267 + L1MEc LINE L1 1133 1783 -4613 21 0 0 0 chr5 116820289 116820310 -86265222 + AT_rich Low_complexity Low_complexity 1 21 0 368 268 86 52 chr5 116820602 116820927 -86264605 + L1MEc LINE L1 2740 3075 -3140 300 252 173 8 chr5 116821171 116821298 -86264234 + L1MDa LINE L1 1577 1724 -4816 270 250 0 0 chr5 116821378 116821458 -86264074 + L1M2 LINE L1 2385 2464 -4385 408 293 50 9 chr5 116821524 116821746 -86263786 + L1M2 LINE L1 4000 4230 -2618 515 233 88 6 chr5 116822541 116822700 -86262832 - MER3 DNA MER1_type 0 209 38 184 221 13 156 chr5 116822856 116822933 -86262599 - MIR SINE MIR -79 183 118 22 99 0 0 chr5 116823847 116823918 -86261614 + AT_rich Low_complexity Low_complexity 1 71 0 2128 118 7 20 chr5 116824028 116824385 -86261147 - L1MC/D LINE L1 -537 5626 5310 1276 175 35 4 chr5 116824487 116824715 -86260817 + MER41D LTR ERV1 323 557 0 1849 216 59 19 chr5 116824877 116825354 -86260178 - MER74A LTR ERVL -62 496 1 253 209 0 0 chr5 116825444 116825487 -86260045 + AluSc SINE Alu 130 172 -127 2106 103 0 3 chr5 116825589 116825880 -86259652 + AluSq SINE Alu 22 311 -2 1028 148 0 0 chr5 116826656 116826818 -86258714 + FRAM SINE Alu 5 166 0 409 173 0 37 chr5 116826822 116826903 -86258629 - MLT1A1 LTR MaLR -243 122 45 1693 232 71 19 chr5 116827599 116828121 -86257411 + MER90 LTR ERV1 66 614 0 8094 157 10 1 chr5 116828328 116829746 -86255786 - L1P LINE L1 -1022 5124 3695 227 261 15 0 chr5 116831742 116831807 -86253725 + MER103 DNA DNA 99 164 -2 23 0 0 0 chr5 116832784 116832807 -86252725 + AT_rich Low_complexity Low_complexity 1 23 0 501 178 40 0 chr5 116833004 116833105 -86252427 + AluJb SINE Alu 185 289 -23 225 0 0 0 chr5 116833107 116833132 -86252400 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 246 383 26 31 chr5 116833150 116833377 -86252155 - L2 LINE L2 -338 2976 2751 255 170 0 0 chr5 116833639 116833686 -86251846 + GA-rich Low_complexity Low_complexity 2 48 0 258 388 8 0 chr5 116835038 116835159 -86250373 + MLT1J LTR MaLR 30 151 -360 305 330 140 5 chr5 116835541 116835741 -86249791 + MLT1J LTR MaLR 115 341 -170 1570 127 79 26 chr5 116835886 116836180 -86249352 + AluSx SINE Alu 3 310 0 27 29 0 0 chr5 116836467 116836501 -86249031 + AT_rich Low_complexity Low_complexity 1 34 0 1962 138 10 0 chr5 116836672 116836963 -86248569 + AluSx SINE Alu 1 294 -18 21 36 0 0 chr5 116837066 116837094 -86248438 + AT_rich Low_complexity Low_complexity 1 28 0 221 221 15 15 chr5 116837116 116837184 -86248348 + T-rich Low_complexity Low_complexity 4 71 0 257 283 0 0 chr5 116837228 116837320 -86248212 - L1 LINE L1 -3111 3035 2944 189 0 0 0 chr5 116837324 116837345 -86248187 + (T)n Simple_repeat Simple_repeat 1 21 0 282 278 26 68 chr5 116838125 116838316 -86247216 - L1 LINE L1 -3111 3035 2853 415 264 55 55 chr5 116838456 116838835 -86246697 - L1 LINE L1 -3418 2728 2350 376 294 107 52 chr5 116839631 116840288 -86245244 - HAL1b LINE L1 -613 735 43 28 61 0 0 chr5 116840291 116840340 -86245192 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 116840378 116840399 -86245133 + AT_rich Low_complexity Low_complexity 1 21 0 297 207 3 71 chr5 116840696 116840830 -86244702 - L1MC4 LINE L1 -8 8003 7880 227 222 0 0 chr5 116840880 116840925 -86244607 + CT-rich Low_complexity Low_complexity 2 46 0 423 329 53 33 chr5 116842507 116842894 -86242638 - LTR33 LTR ERVL 0 521 81 24 32 0 0 chr5 116844338 116844369 -86241163 + AT_rich Low_complexity Low_complexity 1 31 0 185 105 0 26 chr5 116844654 116844692 -86240840 + (GA)n Simple_repeat Simple_repeat 2 38 0 3231 158 35 59 chr5 116844783 116845528 -86240004 - LTR8A LTR ERV1 0 727 1 252 59 0 0 chr5 116845751 116845785 -86239747 + (TG)n Simple_repeat Simple_repeat 1 34 0 476 226 9 17 chr5 116846303 116846418 -86239114 + L1 LINE L1 899 1012 -5129 838 195 38 0 chr5 116846428 116846587 -86238945 + L1PA13 LINE L1 1 165 -6622 350 163 116 0 chr5 116846581 116846667 -86238865 + L1 LINE L1 3716 3811 -2399 * 4550 151 41 24 chr5 116846668 116847537 -86237995 + Tigger3b DNA MER2_type 2 885 -346 1261 204 20 92 chr5 116849302 116849695 -86235837 - MLT1A1 LTR MaLR 0 365 1 2795 13 0 0 chr5 116850694 116851005 -86234527 - AluYb8 SINE Alu -7 311 1 22 0 0 0 chr5 116852277 116852299 -86233233 + AT_rich Low_complexity Low_complexity 1 22 0 1271 253 155 7 chr5 116853585 116854012 -86231520 + MLT1D LTR MaLR 16 505 0 930 288 100 43 chr5 116854588 116855370 -86230162 - L1M4 LINE L1 -823 5323 4498 464 305 82 47 chr5 116855551 116856145 -86229387 - L1M4 LINE L1 -1897 4249 3635 21 0 0 0 chr5 116856475 116856496 -86229036 + AT_rich Low_complexity Low_complexity 1 21 0 248 323 16 32 chr5 116857365 116857489 -86228043 + MIR SINE MIR 68 189 -73 244 322 165 0 chr5 116858317 116858438 -86227094 - MIR SINE MIR -102 160 20 62 44 0 0 chr5 116859957 116860047 -86225485 + AT_rich Low_complexity Low_complexity 1 90 0 2512 45 0 13 chr5 116860853 116861163 -86224369 - AluY SINE Alu -5 306 1 2007 110 0 10 chr5 116861877 116862167 -86223365 + AluSx SINE Alu 15 301 -11 38 22 0 0 chr5 116862370 116862415 -86223117 + AT_rich Low_complexity Low_complexity 1 45 0 3767 158 102 16 chr5 116862730 116863459 -86222073 - MER54B LTR ERVL -2 791 1 251 321 18 0 chr5 116863472 116863581 -86221951 + CT-rich Low_complexity Low_complexity 1 111 0 258 337 54 18 chr5 116864807 116864973 -86220559 + MIR SINE MIR 91 262 0 188 258 54 75 chr5 116865099 116865192 -86220340 + L2 LINE L2 2287 2377 -937 1675 180 13 10 chr5 116866284 116866589 -86218943 + AluSx SINE Alu 2 307 -5 25 0 0 0 chr5 116867623 116867648 -86217884 + AT_rich Low_complexity Low_complexity 1 25 0 477 318 31 0 chr5 116868307 116868436 -86217096 + MIR SINE MIR 4 136 -126 6660 170 80 18 chr5 116868478 116869875 -86215657 + L1MB3 LINE L1 27 1509 -4875 1993 196 50 48 chr5 116869867 116870368 -86215164 - L1M4c LINE L1 -5534 850 349 * 9640 228 37 32 chr5 116870367 116870438 -86215094 + L1MB3 LINE L1 1519 1588 -4831 204 40 0 0 chr5 116870438 116870463 -86215069 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 9640 228 37 32 chr5 116870463 116874233 -86211299 + L1MB3 LINE L1 1588 5339 -1080 2199 191 36 5 chr5 116874233 116874646 -86210886 - MSTB LTR MaLR 0 426 1 5690 77 14 69 chr5 116874647 116875521 -86210011 + LTR12 LTR ERV1 1 826 0 9640 228 37 32 chr5 116875521 116876559 -86208973 + L1MB3 LINE L1 5338 6419 0 232 200 32 42 chr5 116876636 116876731 -86208801 + (TTATA)n Simple_repeat Simple_repeat 5 98 0 664 218 118 14 chr5 116876792 116877012 -86208520 + MER5C DNA MER1_type 1 243 -81 241 292 42 62 chr5 116877304 116877400 -86208132 - L2 LINE L2 -40 3232 3139 21 0 0 0 chr5 116878431 116878452 -86207080 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr5 116878641 116878680 -86206852 + AT_rich Low_complexity Low_complexity 1 39 0 28 29 0 0 chr5 116879792 116879827 -86205705 + AT_rich Low_complexity Low_complexity 1 35 0 269 51 26 0 chr5 116880252 116880291 -86205241 + (CA)n Simple_repeat Simple_repeat 2 41 0 1093 139 0 0 chr5 116880698 116880856 -86204676 - U1 snRNA snRNA -4 161 4 1118 260 42 51 chr5 116882315 116882862 -86202670 + MLT1E LTR MaLR 1 593 0 1608 127 112 32 chr5 116882996 116883343 -86202189 + THE1C LTR MaLR 1 375 0 9373 133 38 16 chr5 116883345 116884849 -86200683 + THE1C-int LTR MaLR 3 1544 -36 2202 113 0 3 chr5 116884849 116885150 -86200382 + AluY SINE Alu 1 300 -11 9373 133 38 16 chr5 116885150 116885188 -86200344 + THE1C-int LTR MaLR 1544 1580 0 1997 109 95 17 chr5 116885188 116885536 -86199996 + THE1C LTR MaLR 1 375 0 534 344 77 26 chr5 116886448 116886800 -86198732 + MLT1I LTR MaLR 32 401 -8 331 371 67 7 chr5 116886868 116887045 -86198487 + MIR SINE MIR 8 192 -65 423 92 0 0 chr5 116887326 116887387 -86198145 + (TG)n Simple_repeat Simple_repeat 1 126 0 423 92 0 0 chr5 116887387 116887452 -86198080 + (TG)n Simple_repeat Simple_repeat 2 66 0 22 0 0 0 chr5 116887782 116887804 -86197728 + AT_rich Low_complexity Low_complexity 1 22 0 302 261 43 22 chr5 116888016 116888108 -86197424 - L1MC4 LINE L1 -1339 6703 6610 295 182 26 0 chr5 116888109 116888186 -86197346 + (TA)n Simple_repeat Simple_repeat 2 80 0 21 0 0 0 chr5 116888216 116888237 -86197295 + AT_rich Low_complexity Low_complexity 1 21 0 226 227 13 27 chr5 116889282 116889357 -86196175 + (TA)n Simple_repeat Simple_repeat 1 74 0 249 65 0 0 chr5 116889590 116889621 -86195911 + LOR1b LTR ERV1 1 31 -430 421 282 90 13 chr5 116889793 116889949 -86195583 + LOR1a LTR ERV1 312 479 -18 741 174 0 8 chr5 116890629 116890761 -86194771 - FLAM_C SINE Alu 0 133 3 1681 153 31 34 chr5 116890794 116891088 -86194444 + AluJo SINE Alu 1 293 -19 1094 262 91 34 chr5 116891459 116891868 -86193664 + MLT1D LTR MaLR 19 450 -55 822 264 110 110 chr5 116891869 116892422 -86193110 + L1MB7 LINE L1 753 1305 -5554 * 3415 220 32 24 chr5 116892415 116893213 -86192319 + L1MB7 LINE L1 5968 6777 -218 2004 139 0 14 chr5 116893213 116893507 -86192025 + AluSx SINE Alu 1 290 -22 3415 220 32 24 chr5 116893507 116893719 -86191813 + L1MB7 LINE L1 6777 6986 -9 24 0 0 0 chr5 116893840 116893864 -86191668 + AT_rich Low_complexity Low_complexity 1 24 0 416 249 9 25 chr5 116895274 116895402 -86190130 + MER5B DNA MER1_type 3 139 -50 180 0 0 0 chr5 116895620 116895640 -86189892 + (CCCTAA)n Simple_repeat Simple_repeat 4 23 0 21 0 0 0 chr5 116895655 116895676 -86189856 + AT_rich Low_complexity Low_complexity 1 21 0 2054 72 7 14 chr5 116895934 116896225 -86189307 - L1PA8 LINE L1 -2 6170 5882 342 311 22 0 chr5 116896328 116896418 -86189114 - MER5A DNA MER1_type -77 112 21 440 284 40 27 chr5 116896470 116896618 -86188914 + MER5B DNA MER1_type 29 178 0 23 54 0 0 chr5 116897210 116897247 -86188285 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 116898051 116898073 -86187459 + AT_rich Low_complexity Low_complexity 1 22 0 42751 33 22 1 chr5 116899390 116905410 -86180122 + L1PA2 LINE L1 4 6149 -6 194 0 39 0 chr5 116905418 116905444 -86180088 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 472 287 76 33 chr5 116906212 116906736 -86178796 + L1M4b LINE L1 1614 2209 -4863 314 324 56 21 chr5 116907189 116907331 -86178201 - L2 LINE L2 0 3313 3167 234 367 0 0 chr5 116908182 116908240 -86177292 - MLT1K LTR MaLR -104 484 424 2404 60 3 25 chr5 116908240 116908557 -86176975 - AluY SINE Alu -1 310 1 234 367 0 0 chr5 116908557 116908607 -86176925 - MLT1K LTR MaLR -163 425 376 297 376 94 5 chr5 116908661 116908863 -86176669 - MLT1K LTR MaLR -292 296 77 407 296 101 79 chr5 116908913 116909190 -86176342 + HAL1b LINE L1 573 855 -493 3472 58 0 7 chr5 116909290 116909741 -86175791 + LTR7 LTR ERV1 1 448 -2 16748 176 57 95 chr5 116909743 116915099 -86170433 + HERVH LTR ERV1 1 5149 -2564 1189 133 84 0 chr5 116915100 116915303 -86170229 + HERVH LTR ERV1 5600 5819 -1894 * 2364 91 42 23 chr5 116915301 116915686 -86169846 + HERVH LTR ERV1 7322 7713 0 3468 53 2 7 chr5 116915686 116916136 -86169396 + LTR7 LTR ERV1 1 448 -2 17322 131 45 18 chr5 116916505 116916793 -86168739 + L1PB1 LINE L1 3 282 -6580 5314 64 6 27 chr5 116916793 116917499 -86168033 - LTR8 LTR ERV1 0 691 1 17322 131 45 18 chr5 116917499 116920452 -86165080 + L1PB1 LINE L1 282 3332 -3530 3471 81 9 0 chr5 116920452 116920910 -86164622 + MER41A LTR ERV1 1 462 -92 11345 192 23 10 chr5 116920918 116924336 -86161196 + L1PB1 LINE L1 3329 6794 -73 823 68 0 0 chr5 116924333 116924436 -86161096 + L1P5 LINE L1 5555 5657 -494 * 278 324 35 14 chr5 116924484 116924629 -86160903 + L1MC/D LINE L1 5630 5777 -2031 1392 204 103 29 chr5 116924775 116925123 -86160409 - MLT1A2 LTR MaLR 0 374 1 22 70 0 0 chr5 116925314 116925357 -86160175 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr5 116925541 116925572 -86159960 + AT_rich Low_complexity Low_complexity 1 31 0 303 327 0 18 chr5 116928578 116928691 -86156841 + MLT1I LTR MaLR 54 164 -245 1479 208 16 32 chr5 116929488 116930121 -86155411 - LTR28 LTR ERV1 0 1020 291 707 219 22 22 chr5 116930177 116930355 -86155177 - LTR28 LTR ERV1 -842 178 1 2191 115 7 0 chr5 116930447 116930752 -86154780 + AluSg SINE Alu 2 308 -2 256 304 0 0 chr5 116931463 116931542 -86153990 + MLT1I LTR MaLR 1 79 -330 367 266 57 16 chr5 116931709 116931833 -86153699 + MLT1I LTR MaLR 281 409 0 314 23 0 23 chr5 116932612 116932656 -86152876 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 363 319 32 32 chr5 116932709 116932866 -86152666 - MIR SINE MIR 0 262 106 25 51 0 0 chr5 116933895 116933934 -86151598 + AT_rich Low_complexity Low_complexity 1 39 0 284 48 24 0 chr5 116934429 116934471 -86151061 + (CA)n Simple_repeat Simple_repeat 2 44 0 504 250 38 12 chr5 116935846 116936006 -86149526 - L2 LINE L2 0 3313 3150 918 205 19 52 chr5 116936028 116936229 -86149303 - L1M4 LINE L1 -1272 4874 4683 2202 111 0 7 chr5 116936229 116936526 -86149006 - AluSc SINE Alu -14 295 1 918 205 19 52 chr5 116936526 116936592 -86148940 - L1M4 LINE L1 -1463 4683 4616 * 997 182 23 0 chr5 116936589 116936765 -86148767 - L1MCa LINE L1 -6217 209 30 554 314 166 45 chr5 116936795 116937241 -86148291 - L2 LINE L2 -167 3146 2624 263 272 25 0 chr5 116937259 116937340 -86148192 + LTR33 LTR ERVL 19 101 -420 1362 213 108 24 chr5 116937523 116937894 -86147638 - MLT1C LTR MaLR -1 466 65 2510 116 5 16 chr5 116937968 116938347 -86147185 + THE1C LTR MaLR 1 375 0 433 268 8 47 chr5 116938420 116938547 -86146985 - L2 LINE L2 -673 2641 2520 256 164 0 20 chr5 116938547 116938605 -86146927 - MLT2B3 LTR ERVL 0 554 459 358 264 19 6 chr5 116938610 116938769 -86146763 + (TA)n Simple_repeat Simple_repeat 1 161 0 848 293 101 25 chr5 116938774 116939139 -86146393 - L2 LINE L2 -818 2496 2104 264 244 13 0 chr5 116939139 116939217 -86146315 + (TA)n Simple_repeat Simple_repeat 1 79 0 2127 235 7 29 chr5 116939217 116939568 -86145964 - MLT2B3 LTR ERVL -22 532 196 3021 104 4 11 chr5 116939568 116940019 -86145513 + LTR7 LTR ERV1 1 448 -2 2127 235 7 29 chr5 116940019 116940211 -86145321 - MLT2B3 LTR ERVL -358 196 1 1385 288 86 19 chr5 116940213 116940782 -86144750 - L2 LINE L2 -792 2522 1916 1546 128 157 82 chr5 116940799 116941175 -86144357 - MER4A LTR ERV1 0 664 261 614 102 10 10 chr5 116941175 116941273 -86144259 - MER4A LTR ERV1 -566 98 1 5443 84 8 11 chr5 116941478 116942539 -86142993 + L1P3 LINE L1 4556 5612 -542 2389 82 0 0 chr5 116942539 116942844 -86142688 + AluY SINE Alu 1 305 -6 5443 84 8 11 chr5 116942844 116942882 -86142650 + L1P3 LINE L1 5612 5649 -505 32 26 0 0 chr5 116943281 116943320 -86142212 + AT_rich Low_complexity Low_complexity 1 39 0 252 232 148 73 chr5 116943346 116943786 -86141746 + L1M4 LINE L1 2791 3263 -2883 21 0 0 0 chr5 116944628 116944649 -86140883 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 116944677 116944702 -86140830 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr5 116944761 116944798 -86140734 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 116944914 116944936 -86140596 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr5 116945463 116945505 -86140027 + AT_rich Low_complexity Low_complexity 1 42 0 324 229 69 90 chr5 116945542 116945686 -86139846 + L1M4b LINE L1 11 151 -6708 310 211 26 13 chr5 116945686 116945762 -86139770 - L2 LINE L2 -718 2596 2520 258 110 19 31 chr5 116945762 116945830 -86139702 - MLT2B3 LTR ERVL 0 554 456 213 235 0 0 chr5 116945835 116945920 -86139612 + (TA)n Simple_repeat Simple_repeat 1 85 0 360 203 51 0 chr5 116945964 116946122 -86139410 + (TA)n Simple_repeat Simple_repeat 1 166 0 335 252 10 39 chr5 116946237 116946340 -86139192 - LTR28 LTR ERV1 -5 1015 916 2659 76 100 5 chr5 116946342 116946751 -86138781 - LTR7 LTR ERV1 -2 448 1 2119 104 56 13 chr5 116946751 116947125 -86138407 - HERVH LTR ERV1 0 7713 7324 1274 129 23 9 chr5 116947125 116947342 -86138190 - HERVH LTR ERV1 -1894 5819 5600 4173 136 0 1 chr5 116947346 116948006 -86137526 - HERVH LTR ERV1 -2567 5146 4488 3245 101 4 6 chr5 116948008 116948511 -86137021 - HERVH LTR ERV1 -3720 3993 3492 838 149 20 0 chr5 116948501 116948649 -86136883 - HERVH LTR ERV1 -4423 3290 3140 * 15238 102 13 20 chr5 116948643 116951535 -86133997 - HERVH LTR ERV1 -4726 2987 1 2548 95 100 5 chr5 116951537 116951946 -86133586 - LTR7 LTR ERV1 -2 448 1 1529 199 115 112 chr5 116951948 116952662 -86132870 - LTR1B LTR ERV1 -110 716 1 29071 158 58 36 chr5 116952663 116959334 -86126198 - LTR1B-int LTR ERV1 0 7091 211 478 286 34 29 chr5 116959334 116959509 -86126023 + L1M4b LINE L1 229 404 -6455 367 280 0 56 chr5 116960357 116960464 -86125068 - L2 LINE L2 -4 3268 3168 384 22 0 0 chr5 116960483 116960528 -86125004 + (TA)n Simple_repeat Simple_repeat 2 46 0 253 324 63 14 chr5 116960817 116960959 -86124573 + MIR SINE MIR 72 220 -42 255 247 13 0 chr5 116961000 116961077 -86124455 + (TA)n Simple_repeat Simple_repeat 2 79 0 1755 213 93 9 chr5 116961125 116961589 -86123943 + MLT1D LTR MaLR 1 503 -2 2096 108 21 0 chr5 116961605 116961910 -86123622 + AluSq SINE Alu 1 313 0 442 309 48 39 chr5 116962130 116962337 -86123195 - MIR SINE MIR 0 262 54 1902 268 20 25 chr5 116963959 116964570 -86120962 + L1M4b LINE L1 321 928 -5927 1640 278 55 23 chr5 116964565 116965406 -86120126 + L1M4b LINE L1 1486 2353 -4606 * 3503 179 38 77 chr5 116965403 116965911 -86119621 + L1MB7 LINE L1 4946 5472 -712 1130 240 30 48 chr5 116965911 116966282 -86119250 + MLT1A1 LTR MaLR 2 365 0 3503 179 38 77 chr5 116966282 116967066 -86118466 + L1MB7 LINE L1 5472 6169 -15 22 56 0 0 chr5 116968167 116968203 -86117329 + AT_rich Low_complexity Low_complexity 1 36 0 1009 248 118 15 chr5 116968652 116968983 -86116549 + MLT1A1 LTR MaLR 1 365 0 422 350 7 0 chr5 116969352 116969489 -86116043 + LTR67 LTR ERVL 87 224 -333 4972 91 11 35 chr5 116970005 116970710 -86114822 + LTR12 LTR ERV1 1 688 0 216 82 41 20 chr5 116970893 116970942 -86114590 + (TTATA)n Simple_repeat Simple_repeat 3 52 0 1017 114 0 0 chr5 116971104 116971236 -86114296 - AluY SINE Alu -179 132 1 1182 147 5 25 chr5 116971298 116971495 -86114037 - AluSg/x SINE Alu -54 258 66 2091 202 22 11 chr5 116971567 116972023 -86113509 + MER65C LTR ERV1 1 461 0 2232 84 0 0 chr5 116972308 116972617 -86112915 + AluY SINE Alu 1 309 0 21 36 0 0 chr5 116975581 116975609 -86109923 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr5 116975681 116975716 -86109816 + AT_rich Low_complexity Low_complexity 1 35 0 2204 93 7 0 chr5 116977820 116978110 -86107422 + AluSp SINE Alu 1 292 -21 255 81 0 0 chr5 116980272 116980309 -86105223 - L1MC5 LINE L1 -625 7336 7300 186 71 0 0 chr5 116980346 116980374 -86105158 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1852 122 0 64 chr5 116980376 116980672 -86104860 - AluSx SINE Alu -23 289 13 305 271 47 0 chr5 116980914 116981021 -86104511 - MIR SINE MIR 0 262 151 2564 62 0 0 chr5 116981047 116981353 -86104179 - AluY SINE Alu -5 306 1 809 225 123 95 chr5 116981419 116981852 -86103680 + MER66A LTR ERV1 96 474 -4 257 313 0 0 chr5 116981861 116981925 -86103607 - MIR SINE MIR -111 151 88 242 391 53 16 chr5 116982704 116982947 -86102585 - MIR SINE MIR -10 252 1 186 43 0 0 chr5 116984034 116984057 -86101475 + (T)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 116984070 116984092 -86101440 + AT_rich Low_complexity Low_complexity 1 22 0 7797 19 0 0 chr5 116984092 116985595 -86099937 - L1PA2 LINE L1 -1 6154 4652 1423 12 0 0 chr5 116985595 116985758 -86099774 + L1PA2 LINE L1 4471 4633 -1513 1663 181 0 17 chr5 116986182 116986475 -86099057 - AluJo SINE Alu -23 289 2 329 343 0 54 chr5 116986602 116986768 -86098764 - MIR SINE MIR -58 204 48 278 310 23 11 chr5 116987133 116987220 -86098312 + L2 LINE L2 3181 3268 -4 25 51 0 0 chr5 116988704 116988743 -86096789 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 116988773 116988803 -86096729 + AT_rich Low_complexity Low_complexity 1 30 0 765 179 21 0 chr5 116992000 116992140 -86093392 - MLT1E3 LTR MaLR -481 143 1 843 240 20 136 chr5 116992140 116992581 -86092951 - MLT1E3-int LTR MaLR 0 1371 982 226 326 0 11 chr5 116992714 116992806 -86092726 - MLT1E3-int LTR MaLR -488 883 793 1509 266 59 10 chr5 116993439 116993962 -86091570 - MLT1E3-int LTR MaLR -822 549 1 1649 264 54 33 chr5 116993962 116994573 -86090959 - MLT1E3 LTR MaLR 0 624 1 240 224 283 19 chr5 116994662 116994825 -86090707 + MIR SINE MIR 58 256 -6 1666 154 162 11 chr5 116994852 116995039 -86090493 + MSTA LTR MaLR 1 158 -270 1724 180 7 7 chr5 116995039 116995333 -86090199 + AluSx SINE Alu 1 294 -18 1666 154 162 11 chr5 116995333 116995347 -86090185 + MSTA LTR MaLR 158 169 -259 186 43 0 0 chr5 116995347 116995370 -86090162 + (TC)n Simple_repeat Simple_repeat 1 23 0 1666 154 162 11 chr5 116995370 116995538 -86089994 + MSTA LTR MaLR 169 427 -1 931 215 16 0 chr5 116995606 116995792 -86089740 - MER5A DNA MER1_type 0 189 1 2653 35 0 19 chr5 116997469 116997786 -86087746 - AluY SINE Alu 0 311 1 27 0 0 0 chr5 116999424 116999451 -86086081 + AT_rich Low_complexity Low_complexity 1 27 0 2755 96 36 3 chr5 116999809 117000479 -86085053 - L1MA1 LINE L1 0 6302 5546 2066 149 7 0 chr5 117000643 117000951 -86084581 + AluSq SINE Alu 1 310 -3 2111 164 9 52 chr5 117001543 117001710 -86083822 - L1MC1 LINE L1 -11 6322 6149 1602 185 60 28 chr5 117001710 117002062 -86083470 - MLT1A1 LTR MaLR -2 363 1 2111 164 9 52 chr5 117002062 117002327 -86083205 - L1MC1 LINE L1 -184 6149 5909 2076 123 3 3 chr5 117002327 117002635 -86082897 - AluSx SINE Alu -4 308 1 2111 164 9 52 chr5 117002635 117002663 -86082869 - L1MC1 LINE L1 -424 5909 5881 684 258 5 42 chr5 117002668 117002743 -86082789 - L1M4 LINE L1 -1050 5096 5020 2172 96 3 7 chr5 117002743 117003044 -86082488 - AluSg SINE Alu -10 300 1 684 258 5 42 chr5 117003044 117003181 -86082351 - L1M4 LINE L1 -1126 5020 4892 470 246 8 24 chr5 117003176 117003302 -86082230 + L1 LINE L1 4030 4153 -1993 * 3113 184 20 35 chr5 117003287 117004001 -86081531 + L1 LINE L1 4361 5063 -1083 1104 168 57 7 chr5 117004055 117004351 -86081181 - L1MA4A LINE L1 -57 7308 6937 406 200 40 60 chr5 117004375 117004475 -86081057 + MSTA LTR MaLR 331 428 0 3158 175 30 12 chr5 117004479 117005651 -86079881 - L1MA4A LINE L1 -443 6922 5732 8088 212 28 14 chr5 117005652 117007938 -86077594 - L1MA4A LINE L1 -2360 4848 2500 1962 150 10 10 chr5 117007938 117008244 -86077288 - AluSc SINE Alu -3 306 1 8088 212 28 14 chr5 117008244 117009296 -86076236 - L1MA4A LINE L1 -4708 2500 1464 315 256 100 11 chr5 117009541 117009631 -86075901 - L1MA4A LINE L1 -6435 774 677 1540 327 45 10 chr5 117009649 117010254 -86075278 - L1MA4A LINE L1 -6582 627 2 870 188 34 5 chr5 117010654 117010861 -86074671 + L1 LINE L1 5070 5282 -864 4147 160 22 22 chr5 117010891 117011718 -86073814 - L1MCa LINE L1 -5026 1400 574 2844 200 32 30 chr5 117011771 117012362 -86073170 - L1MCa LINE L1 -5815 611 20 26 0 0 0 chr5 117014336 117014362 -86071170 + AT_rich Low_complexity Low_complexity 1 26 0 2051 221 40 27 chr5 117014497 117015044 -86070488 - L1MC3 LINE L1 -15 7770 7217 * 2645 255 44 24 chr5 117015041 117016761 -86068771 + L1MB1 LINE L1 670 2262 -3950 4116 110 116 141 chr5 117016761 117018146 -86067386 + pTR5 LTR ERV1 760 2435 -3 1070 220 51 17 chr5 117018146 117018500 -86067032 + L1MB1 LINE L1 2244 2609 -3601 * 3627 204 35 32 chr5 117018497 117018641 -86066891 + L1MB1 LINE L1 5249 5391 -841 825 259 0 0 chr5 117018641 117018799 -86066733 + FAM SINE Alu 1 158 -17 2134 100 3 20 chr5 117018800 117019099 -86066433 + AluSg SINE Alu 13 306 -4 3627 204 35 32 chr5 117019099 117019927 -86065605 + L1MB1 LINE L1 5390 6232 0 23 33 0 0 chr5 117020371 117020401 -86065131 + AT_rich Low_complexity Low_complexity 1 30 0 2007 132 0 0 chr5 117020489 117020799 -86064733 - AluSx SINE Alu 0 310 1 5501 208 71 32 chr5 117021629 117023136 -86062396 + MER45R DNA AcHobo 16 1580 -1 225 81 27 0 chr5 117023504 117023541 -86061991 - MLT1J2 LTR MaLR -46 404 367 3827 273 42 10 chr5 117023726 117025010 -86060522 - L1MEc LINE L1 -5023 1373 49 206 340 119 56 chr5 117025117 117025544 -86059988 - L2 LINE L2 -1212 2102 1649 198 0 0 0 chr5 117026037 117026059 -86059473 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 616 80 20 0 chr5 117027254 117027354 -86058178 + (TC)n Simple_repeat Simple_repeat 1 102 0 1115 299 45 24 chr5 117027355 117028183 -86057349 + MER45C DNA AcHobo 14 953 0 265 273 57 0 chr5 117028668 117028756 -86056776 - MIR SINE MIR -46 216 124 879 184 56 47 chr5 117029014 117029247 -86056285 - L1MA9 LINE L1 0 6312 6078 3228 142 149 144 chr5 117029247 117030614 -86054918 + pTR5 LTR ERV1 743 2438 0 239 175 53 18 chr5 117030615 117030672 -86054860 - L1MA9 LINE L1 -229 6083 6025 2250 82 0 0 chr5 117033181 117033493 -86052039 + AluSc SINE Alu 1 312 0 425 296 54 47 chr5 117034399 117034696 -86050836 + HAL1b LINE L1 282 580 -768 31 26 0 0 chr5 117035201 117035239 -86050293 + AT_rich Low_complexity Low_complexity 1 38 0 35 78 0 0 chr5 117035810 117035887 -86049645 + AT_rich Low_complexity Low_complexity 1 77 0 217 149 68 14 chr5 117036037 117036111 -86049421 + (TA)n Simple_repeat Simple_repeat 1 78 0 2181 90 7 0 chr5 117037207 117037506 -86048026 + AluY SINE Alu 1 301 -10 801 300 64 22 chr5 117037835 117038559 -86046973 - L1ME3A LINE L1 -288 5882 5127 542 269 120 14 chr5 117038629 117038997 -86046535 - L1ME3A LINE L1 -1251 4895 4489 251 288 6 18 chr5 117043256 117043419 -86042113 + (TA)n Simple_repeat Simple_repeat 2 162 0 2137 78 0 11 chr5 117043590 117043871 -86041661 + AluSg1 SINE Alu 1 278 -31 279 0 0 0 chr5 117045366 117045397 -86040135 + (T)n Simple_repeat Simple_repeat 1 31 0 2212 99 3 0 chr5 117046253 117046547 -86038985 + AluSc SINE Alu 1 295 -14 1686 219 60 40 chr5 117046800 117047270 -86038262 - MLT1D LTR MaLR -1 504 26 309 250 0 0 chr5 117048061 117048121 -86037411 - MER2 DNA MER2_type 0 345 286 1960 122 0 10 chr5 117048141 117048435 -86037097 - AluSc SINE Alu -18 291 1 708 181 110 0 chr5 117048492 117048647 -86036885 - MER2 DNA MER2_type -134 211 40 311 291 55 18 chr5 117049681 117049791 -86035741 + MER91A DNA MER1_type 73 186 -10 22 70 0 0 chr5 117050799 117050842 -86034690 + AT_rich Low_complexity Low_complexity 1 43 0 234 315 131 31 chr5 117050977 117051107 -86034425 + LTR33 LTR ERVL 4 146 -375 275 303 26 0 chr5 117051199 117051275 -86034257 + MER2 DNA MER2_type 1 78 -267 203 260 58 98 chr5 117051955 117052128 -86033404 + MIR SINE MIR 70 235 -27 225 0 0 0 chr5 117052400 117052425 -86033107 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2364 74 7 0 chr5 117052604 117052901 -86032631 + AluSq SINE Alu 1 299 -14 27 0 0 0 chr5 117053464 117053491 -86032041 + AT_rich Low_complexity Low_complexity 1 27 0 432 55 0 0 chr5 117054425 117054480 -86031052 + (CA)n Simple_repeat Simple_repeat 1 55 0 332 308 51 8 chr5 117054718 117054835 -86030697 - L2 LINE L2 0 3313 3192 314 298 89 16 chr5 117055097 117055221 -86030311 + MER94 DNA DNA 1 133 -1 254 333 101 8 chr5 117055223 117055352 -86030180 - L2 LINE L2 -514 2800 2660 685 317 77 47 chr5 117055408 117055979 -86029553 - L2 LINE L2 -826 2488 1901 407 268 32 8 chr5 117055999 117056122 -86029410 + MIR SINE MIR 56 181 -81 537 258 17 0 chr5 117056122 117056242 -86029290 + Charlie1 DNA MER1_type 1 122 -2639 * 545 209 20 52 chr5 117056240 117056393 -86029139 + Charlie1 DNA MER1_type 1485 1632 -1129 * 1706 197 133 66 chr5 117056385 117057055 -86028477 + Charlie1 DNA MER1_type 2047 2761 0 224 266 31 0 chr5 117057133 117057197 -86028335 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 234 373 0 0 chr5 117058274 117058349 -86027183 - MIR3 SINE MIR -49 159 85 632 258 69 10 chr5 117058712 117059096 -86026436 - LTR33 LTR ERVL 0 521 17 848 281 117 17 chr5 117060808 117061107 -86024425 + MLT1I LTR MaLR 72 400 -9 2254 113 0 0 chr5 117061419 117061730 -86023802 + AluSq SINE Alu 1 311 -2 1976 136 4 0 chr5 117062136 117062448 -86023084 + AluSq SINE Alu 4 316 0 202 151 301 27 chr5 117062462 117062535 -86022997 + MIR SINE MIR 73 165 -97 1703 177 130 19 chr5 117062535 117062913 -86022619 - MSTA LTR MaLR -8 420 1 32 0 0 0 chr5 117063020 117063052 -86022480 + AT_rich Low_complexity Low_complexity 1 32 0 642 325 45 14 chr5 117063064 117063272 -86022260 - L2 LINE L2 -16 3297 3076 2153 101 3 3 chr5 117063272 117063570 -86021962 - AluY SINE Alu -13 298 1 642 325 45 14 chr5 117063570 117063650 -86021882 - L2 LINE L2 -237 3076 3000 21 36 0 0 chr5 117065484 117065512 -86020020 + AT_rich Low_complexity Low_complexity 1 28 0 221 222 0 0 chr5 117065631 117065676 -86019856 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 85 0 0 chr5 117068905 117068964 -86016568 + AT_rich Low_complexity Low_complexity 1 59 0 330 264 22 0 chr5 117069130 117069221 -86016311 + MER94 DNA DNA 6 98 -36 21 0 0 0 chr5 117069655 117069676 -86015856 + AT_rich Low_complexity Low_complexity 1 21 0 399 113 0 0 chr5 117070443 117070505 -86015027 + (TA)n Simple_repeat Simple_repeat 2 63 0 326 287 53 27 chr5 117071423 117071573 -86013959 - L1MC5 LINE L1 -31 7930 7777 2352 69 7 0 chr5 117071591 117071882 -86013650 - AluY SINE Alu -18 293 1 254 265 10 10 chr5 117071929 117072031 -86013501 + (TA)n Simple_repeat Simple_repeat 2 103 0 618 182 32 19 chr5 117072164 117072318 -86013214 - L1MA7 LINE L1 -11 6280 6125 1123 163 92 44 chr5 117072386 117072483 -86013049 - L1MC5 LINE L1 -385 7576 7485 243 0 0 0 chr5 117072483 117072510 -86013022 + (TC)n Simple_repeat Simple_repeat 1 27 0 1123 163 92 44 chr5 117072510 117072707 -86012825 - L1MC5 LINE L1 -476 7485 7268 726 283 66 12 chr5 117072749 117072993 -86012539 + MIR SINE MIR 6 262 0 229 239 28 42 chr5 117073646 117073717 -86011815 + L3b LINE CR1 1345 1414 -169 22 0 0 0 chr5 117074098 117074120 -86011412 + AT_rich Low_complexity Low_complexity 1 22 0 533 213 39 32 chr5 117075457 117075612 -86009920 - L1MB4 LINE L1 -1 6179 6024 37 52 0 0 chr5 117075999 117076057 -86009475 + AT_rich Low_complexity Low_complexity 1 58 0 231 231 13 26 chr5 117077223 117077301 -86008231 - L1ME4a LINE L1 -83 6038 5962 300 276 28 61 chr5 117077314 117077495 -86008037 - L1ME4a LINE L1 -3 6118 5944 4916 115 0 0 chr5 117077906 117078287 -86007245 - L1PA15 LINE L1 0 6165 5785 216 0 0 0 chr5 117078287 117078311 -86007221 + (TA)n Simple_repeat Simple_repeat 1 24 0 4916 115 0 0 chr5 117078311 117078385 -86007147 - L1PA15 LINE L1 -380 5785 5712 414 0 0 0 chr5 117078385 117078431 -86007101 + (TG)n Simple_repeat Simple_repeat 2 47 0 4916 115 0 0 chr5 117078431 117079242 -86006290 - L1PA15 LINE L1 -452 5713 4995 2310 102 20 17 chr5 117079242 117079596 -86005936 + THE1A LTR MaLR 1 355 0 5066 99 4 15 chr5 117079596 117079969 -86005563 + THE1A-int LTR MaLR 1 364 -1216 2235 115 10 3 chr5 117079969 117080274 -86005258 - AluSc SINE Alu -2 307 1 5066 99 4 15 chr5 117080274 117080618 -86004914 + THE1A-int LTR MaLR 364 710 -870 647 85 4 92 chr5 117080618 117080733 -86004799 + THE1A LTR MaLR 263 355 0 226 178 0 0 chr5 117080733 117080778 -86004754 - L1P LINE L1 -1147 4999 4955 2058 203 4 15 chr5 117080779 117081247 -86004285 - L1 LINE L1 -1287 4859 4397 831 177 14 0 chr5 117081701 117081848 -86003684 - MSTD LTR MaLR -247 149 1 195 333 16 0 chr5 117082278 117082341 -86003191 - MIR SINE MIR -78 130 67 2177 130 13 45 chr5 117082382 117082758 -86002774 - THE1B LTR MaLR 0 364 1 10170 110 31 36 chr5 117082759 117084347 -86001185 - THE1B-int LTR MaLR -1 1579 1 2037 139 25 35 chr5 117084347 117084715 -86000817 - THE1B LTR MaLR 0 364 1 495 311 68 10 chr5 117084903 117085109 -86000423 + MIR SINE MIR 10 227 -35 238 357 132 65 chr5 117085324 117085725 -85999807 + L2 LINE L2 2805 3232 -40 464 254 39 15 chr5 117085742 117085872 -85999660 + L1ME3 LINE L1 5988 6120 -42 785 255 43 8 chr5 117085930 117086165 -85999367 + L1ME3A LINE L1 5927 6169 -1 206 170 21 0 chr5 117086183 117086230 -85999302 + (TA)n Simple_repeat Simple_repeat 2 49 0 31 44 0 0 chr5 117087103 117087148 -85998384 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr5 117087171 117087209 -85998323 + AT_rich Low_complexity Low_complexity 1 38 0 556 333 103 21 chr5 117087645 117087936 -85997596 - MLT1J LTR MaLR -169 342 28 206 292 35 44 chr5 117088709 117088822 -85996710 - L3 LINE CR1 -69 1508 1397 213 274 98 39 chr5 117088825 117088927 -85996605 - L2 LINE L2 0 3313 3206 206 337 165 50 chr5 117088934 117089231 -85996301 - L3 LINE CR1 -177 1400 1070 245 322 187 0 chr5 117089471 117089642 -85995890 + MIR SINE MIR 49 251 -11 248 413 71 0 chr5 117089765 117089891 -85995641 - L2 LINE L2 -19 3253 3119 1575 193 3 37 chr5 117090933 117091254 -85994278 + AluJo SINE Alu 3 312 0 2478 68 0 3 chr5 117091339 117091649 -85993883 - AluY SINE Alu -2 309 1 22 0 0 0 chr5 117093195 117093217 -85992315 + AT_rich Low_complexity Low_complexity 1 22 0 1074 196 99 105 chr5 117093745 117094137 -85991395 - MER57A LTR ERV1 -9 394 5 2035 78 7 39 chr5 117094451 117094759 -85990773 - AluY SINE Alu -12 299 2 212 0 36 0 chr5 117094793 117094821 -85990711 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 117095309 117095331 -85990201 + AT_rich Low_complexity Low_complexity 1 22 0 244 202 21 96 chr5 117095648 117095742 -85989790 - L3b LINE CR1 -180 1403 1317 308 333 14 28 chr5 117095859 117096003 -85989529 - MIR3 SINE MIR -66 142 1 482 359 47 25 chr5 117096724 117097116 -85988416 - L2 LINE L2 -199 3073 2680 1785 107 118 4 chr5 117097859 117098122 -85987410 - AluSg1 SINE Alu -16 293 1 28 0 0 0 chr5 117100588 117100616 -85984916 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 117100714 117100737 -85984795 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 117101924 117101960 -85983572 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 117102714 117102735 -85982797 + AT_rich Low_complexity Low_complexity 1 21 0 220 288 38 0 chr5 117103289 117103369 -85982163 + (TA)n Simple_repeat Simple_repeat 1 83 0 2201 103 0 3 chr5 117104018 117104308 -85981224 + AluSg SINE Alu 1 289 -21 2091 118 3 16 chr5 117104620 117104935 -85980597 + AluSx SINE Alu 1 311 -1 2731 167 92 44 chr5 117105042 117105778 -85979754 + LTR1B LTR ERV1 1 777 -8 25 0 0 0 chr5 117106182 117106207 -85979325 + AT_rich Low_complexity Low_complexity 1 25 0 2805 85 0 0 chr5 117106917 117107281 -85978251 + THE1B LTR MaLR 1 364 0 218 227 0 0 chr5 117107544 117107588 -85977944 + A-rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 117107806 117107829 -85977703 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr5 117108451 117108477 -85977055 + (TG)n Simple_repeat Simple_repeat 2 27 0 224 316 13 40 chr5 117108790 117108866 -85976666 - MER5A DNA MER1_type -1 188 115 29 0 0 0 chr5 117109621 117109650 -85975882 + AT_rich Low_complexity Low_complexity 1 29 0 586 362 13 13 chr5 117111518 117111750 -85973782 - MIR SINE MIR -23 239 8 207 0 0 0 chr5 117112056 117112079 -85973453 + (A)n Simple_repeat Simple_repeat 1 23 0 309 89 0 0 chr5 117112690 117112735 -85972797 + (TG)n Simple_repeat Simple_repeat 2 46 0 338 348 138 7 chr5 117113137 117113419 -85972113 + L2 LINE L2 2439 2757 -557 30 27 0 0 chr5 117116273 117116310 -85969222 + AT_rich Low_complexity Low_complexity 1 37 0 1710 60 51 5 chr5 117116656 117116872 -85968660 + AluY SINE Alu 18 243 -68 450 0 0 0 chr5 117117922 117117972 -85967560 + (CA)n Simple_repeat Simple_repeat 2 51 0 2276 120 0 0 chr5 117118038 117118346 -85967186 + AluSc SINE Alu 1 308 -1 216 309 59 0 chr5 117118473 117118541 -85966991 - L2 LINE L2 -6 3307 3236 209 326 32 117 chr5 117118735 117119112 -85966420 - L2 LINE L2 -341 2973 2629 180 0 0 0 chr5 117119652 117119672 -85965860 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 24 67 0 0 chr5 117120090 117120135 -85965397 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr5 117120264 117120302 -85965230 + AT_rich Low_complexity Low_complexity 1 38 0 2334 86 0 10 chr5 117120311 117120625 -85964907 + AluY SINE Alu 1 311 0 2163 112 7 0 chr5 117121102 117121398 -85964134 - AluSx SINE Alu -14 298 1 1388 232 60 35 chr5 117121677 117122112 -85963420 + MLT2C2 LTR ERVL 1 446 -18 1773 217 105 50 chr5 117122112 117122637 -85962895 - MLT2B3 LTR ERVL 0 554 1 361 316 30 15 chr5 117123810 117123943 -85961589 - MER5B DNA MER1_type -43 135 1 280 335 70 30 chr5 117124577 117124777 -85960755 - L2 LINE L2 0 3313 3106 4162 64 8 0 chr5 117124878 117125412 -85960120 + L1PA7 LINE L1 5617 6154 0 1319 103 39 69 chr5 117125472 117125705 -85959827 + MER30 DNA MER1_type 1 226 -4 181 319 14 14 chr5 117126247 117126319 -85959213 - L2 LINE L2 -1049 2265 2194 1820 124 11 14 chr5 117126532 117126814 -85958718 + AluSp SINE Alu 1 281 -32 180 0 0 0 chr5 117126817 117126837 -85958695 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 240 398 17 33 chr5 117126874 117127055 -85958477 - L2 LINE L2 -1297 2017 1840 1379 89 0 0 chr5 117127333 117127512 -85958020 - AluY SINE Alu -10 301 123 1202 109 29 6 chr5 117127676 117127851 -85957681 - AluY SINE Alu -132 179 1 240 263 32 63 chr5 117129200 117129295 -85956237 - MIR3 SINE MIR -31 177 86 2291 104 0 3 chr5 117129398 117129706 -85955826 + AluSc SINE Alu 1 307 -2 24 32 0 0 chr5 117130459 117130490 -85955042 + AT_rich Low_complexity Low_complexity 1 31 0 2841 10 0 0 chr5 117130779 117131090 -85954442 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 117131103 117131126 -85954406 + AT_rich Low_complexity Low_complexity 1 23 0 247 149 21 0 chr5 117131594 117131641 -85953891 + (TA)n Simple_repeat Simple_repeat 2 49 0 448 261 15 37 chr5 117132212 117132346 -85953186 + L2 LINE L2 3179 3309 -4 344 333 167 14 chr5 117132748 117132958 -85952574 + MIR SINE MIR 21 262 0 253 235 86 12 chr5 117133888 117133969 -85951563 - MIR3 SINE MIR -4 204 118 256 229 57 107 chr5 117134032 117134111 -85951421 + L2 LINE L2 3158 3229 -84 1757 185 45 21 chr5 117134111 117134489 -85951043 + MLT1B LTR MaLR 1 387 -3 256 229 57 107 chr5 117134489 117134549 -85950983 + L2 LINE L2 3229 3290 -23 261 260 1 15 chr5 117134554 117134630 -85950902 + GA-rich Low_complexity Low_complexity 3 57 0 215 304 0 0 chr5 117135725 117135804 -85949728 + (TG)n Simple_repeat Simple_repeat 2 80 0 784 245 50 55 chr5 117136212 117136555 -85948977 - Charlie8 DNA MER1_type -2018 399 59 780 295 69 0 chr5 117136737 117136954 -85948578 + MIR SINE MIR 31 262 0 276 313 42 0 chr5 117138248 117138344 -85947188 - L2 LINE L2 -12 3260 3161 25 31 0 0 chr5 117138959 117138991 -85946541 + AT_rich Low_complexity Low_complexity 1 32 0 219 274 16 0 chr5 117140603 117140665 -85944867 - MIR SINE MIR -142 120 58 247 250 62 62 chr5 117141975 117142071 -85943461 + MIR SINE MIR 117 212 -50 712 323 35 4 chr5 117142493 117142719 -85942813 + MIR SINE MIR 26 258 -4 345 377 15 87 chr5 117143484 117143877 -85941655 + L2 LINE L2 2869 3233 -39 26 82 0 0 chr5 117143984 117144045 -85941487 + AT_rich Low_complexity Low_complexity 1 61 0 194 333 205 0 chr5 117144327 117144444 -85941088 + MIR3 SINE MIR 38 178 -30 2282 160 46 20 chr5 117145303 117145961 -85939571 - LTR26E LTR ERV1 -7 615 2 320 233 41 14 chr5 117146314 117146387 -85939145 - L2 LINE L2 0 3313 3239 21 36 0 0 chr5 117147980 117148008 -85937524 + AT_rich Low_complexity Low_complexity 1 28 0 2090 124 14 0 chr5 117148053 117148343 -85937189 - AluSg SINE Alu -15 295 2 2243 90 13 13 chr5 117148787 117149097 -85936435 - AluSq SINE Alu -3 310 1 839 246 133 64 chr5 117149385 117149857 -85935675 - MLT1D LTR MaLR 0 505 1 1251 212 97 25 chr5 117150001 117150393 -85935139 - MER69 DNA AcHobo 0 2526 2107 2486 48 0 10 chr5 117150407 117150721 -85934811 - AluY SINE Alu 0 311 1 375 210 0 12 chr5 117151161 117151242 -85934290 - MER69 DNA AcHobo -97 80 1 201 204 0 23 chr5 117151263 117151307 -85934225 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1807 176 3 0 chr5 117154628 117154929 -85930603 + AluSx SINE Alu 2 303 -9 213 132 0 0 chr5 117155741 117155779 -85929753 + (GAAAA)n Simple_repeat Simple_repeat 5 42 0 254 271 148 36 chr5 117156957 117157315 -85928217 - L1ME4a LINE L1 -3 6118 5721 284 290 97 26 chr5 117157938 117158122 -85927410 + MIR3 SINE MIR 6 206 -2 381 206 49 39 chr5 117158434 117158536 -85926996 - MER112 DNA MER1_type -6 254 152 22 35 0 0 chr5 117161206 117161235 -85924297 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr5 117161470 117161506 -85924026 + AT_rich Low_complexity Low_complexity 1 36 0 204 203 17 34 chr5 117161551 117161610 -85923922 + MIR SINE MIR 195 252 -10 1578 261 85 6 chr5 117161884 117162402 -85923130 + L1ME1 LINE L1 5599 6157 -9 442 337 93 28 chr5 117162487 117163057 -85922475 + HAL1b LINE L1 129 735 -613 1938 236 49 84 chr5 117163383 117164314 -85921218 + L1MC5 LINE L1 6635 7470 -491 2227 110 0 0 chr5 117164849 117165157 -85920375 + AluSg1 SINE Alu 1 308 -1 1475 227 110 50 chr5 117165220 117165896 -85919636 - L1ME3A LINE L1 -7 6163 5529 2083 129 56 6 chr5 117165896 117166253 -85919279 - THE1C LTR MaLR 0 375 1 1475 227 110 50 chr5 117166253 117166404 -85919128 - L1ME3A LINE L1 -641 5529 5389 6517 119 26 20 chr5 117166404 117167468 -85918064 - MER11C LTR ERVK 0 1071 1 1475 227 110 50 chr5 117167468 117167495 -85918037 - L1ME3A LINE L1 -781 5389 5208 593 275 54 61 chr5 117168113 117168463 -85917069 - MLT1L LTR MaLR -67 527 108 25 31 0 0 chr5 117168564 117168596 -85916936 + AT_rich Low_complexity Low_complexity 1 32 0 334 211 211 18 chr5 117168729 117168900 -85916632 - L1MC4 LINE L1 -1251 6791 6588 186 189 0 0 chr5 117168900 117168937 -85916595 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1011 79 0 29 chr5 117168955 117169095 -85916437 - AluY SINE Alu -19 292 157 405 259 30 1 chr5 117169099 117169236 -85916296 - L1MC4 LINE L1 -1408 6592 6444 21 95 0 0 chr5 117169727 117169790 -85915742 + AT_rich Low_complexity Low_complexity 1 63 0 1289 270 75 84 chr5 117171121 117171707 -85913825 + L2 LINE L2 1327 1906 -1408 2395 75 0 28 chr5 117171707 117172027 -85913505 + AluSp SINE Alu 2 312 -1 1289 270 75 84 chr5 117172027 117172248 -85913284 + L2 LINE L2 1906 2127 -1187 212 179 0 0 chr5 117172346 117172385 -85913147 + T-rich Low_complexity Low_complexity 1 39 0 622 288 110 32 chr5 117172399 117172680 -85912852 + L2 LINE L2 3011 3313 0 23 33 0 0 chr5 117173234 117173264 -85912268 + AT_rich Low_complexity Low_complexity 1 30 0 187 299 52 62 chr5 117173337 117173434 -85912098 + MIR SINE MIR 52 147 -115 653 278 5 11 chr5 117173454 117173641 -85911891 + MER117 DNA MER1_type 9 194 -3 277 184 0 0 chr5 117173641 117173690 -85911842 + MIR3 SINE MIR 151 199 -9 24 32 0 0 chr5 117173833 117173864 -85911668 + AT_rich Low_complexity Low_complexity 1 31 0 184 306 0 48 chr5 117174738 117174800 -85910732 - L3 LINE CR1 -1 1576 1518 282 304 163 7 chr5 117175771 117175906 -85909626 - MIR3 SINE MIR -48 160 5 1699 153 0 0 chr5 117177870 117178132 -85907400 + AluY SINE Alu 44 305 -6 190 244 0 0 chr5 117179201 117179246 -85906286 + MER5A DNA MER1_type 142 186 -3 429 239 106 9 chr5 117181181 117181294 -85904238 + MIR3 SINE MIR 85 208 0 219 103 0 0 chr5 117181761 117181800 -85903732 + (T)n Simple_repeat Simple_repeat 1 39 0 2446 64 0 3 chr5 117183734 117184029 -85901503 - AluY SINE Alu -17 294 1 580 256 199 5 chr5 117184374 117184565 -85900967 - MIR SINE MIR -33 229 2 2214 169 7 33 chr5 117185027 117185452 -85900080 + MLT2D LTR ERVL 1 414 0 609 270 87 39 chr5 117185454 117185859 -85899673 + MLT1L LTR MaLR 88 598 -17 329 331 70 37 chr5 117185941 117186183 -85899349 - MER102a DNA MER1_type -10 320 71 2160 123 7 0 chr5 117187924 117188232 -85897300 + AluSx SINE Alu 3 312 0 495 0 0 0 chr5 117189321 117189376 -85896156 + (TA)n Simple_repeat Simple_repeat 1 55 0 2360 83 0 3 chr5 117189376 117189677 -85895855 - AluY SINE Alu -11 300 1 1738 178 20 0 chr5 117189681 117189973 -85895559 - AluJo SINE Alu -4 308 11 318 250 95 54 chr5 117190293 117190420 -85895112 + L2 LINE L2 2158 2295 -1019 1932 169 45 36 chr5 117190420 117190840 -85894692 - MSTB LTR MaLR 0 426 3 318 250 95 54 chr5 117190840 117190880 -85894652 + L2 LINE L2 2295 2332 -982 37 62 0 0 chr5 117191085 117191150 -85894382 + AT_rich Low_complexity Low_complexity 1 65 0 325 357 81 19 chr5 117191904 117192114 -85893418 - MIR SINE MIR -28 234 12 2271 129 0 0 chr5 117192826 117193137 -85892395 - AluSx SINE Alu -1 311 1 2223 117 0 7 chr5 117194432 117194739 -85890793 - AluSx SINE Alu -7 305 1 211 330 33 22 chr5 117195377 117195468 -85890064 - MIR SINE MIR -63 145 66 2503 58 0 0 chr5 117196803 117197114 -85888418 + AluY SINE Alu 1 311 0 231 36 0 0 chr5 117198266 117198294 -85887238 + (TG)n Simple_repeat Simple_repeat 1 28 0 293 253 160 19 chr5 117199054 117199199 -85886333 - MIR SINE MIR -58 204 41 3447 207 46 36 chr5 117199388 117200293 -85885239 + L1MCa LINE L1 20 933 -5493 279 195 133 9 chr5 117200303 117200416 -85885116 - L1MCa LINE L1 -4097 2329 2203 367 202 71 0 chr5 117200468 117200552 -85884980 + L1MCa LINE L1 929 1018 -5408 * 1255 219 22 51 chr5 117200550 117201154 -85884378 + L1MCa LINE L1 2254 2839 -3587 943 223 29 70 chr5 117201258 117201599 -85883933 + L1M4 LINE L1 4313 4639 -1507 438 283 66 18 chr5 117202711 117202877 -85882655 - MIR SINE MIR 0 262 89 1900 194 42 123 chr5 117202929 117203359 -85882173 - MLT1F1 LTR MaLR 0 567 201 1201 209 121 21 chr5 117203359 117203699 -85881833 + MLT1A2 LTR MaLR 1 374 0 1900 194 42 123 chr5 117203699 117203885 -85881647 - MLT1F1 LTR MaLR -366 201 1 2037 100 31 3 chr5 117204173 117204464 -85881068 - AluSc SINE Alu -8 301 3 2419 75 0 0 chr5 117204475 117204783 -85880749 - AluY SINE Alu -3 308 1 703 280 78 5 chr5 117204894 117205112 -85880420 + MIR SINE MIR 26 259 -3 216 0 0 0 chr5 117205161 117205185 -85880347 + (T)n Simple_repeat Simple_repeat 1 24 0 365 386 61 12 chr5 117206152 117206315 -85879217 + MER5B DNA MER1_type 5 175 -3 2350 78 0 19 chr5 117206810 117207118 -85878414 + AluY SINE Alu 1 302 -9 340 164 0 0 chr5 117207240 117207295 -85878237 + L2 LINE L2 3257 3311 -2 300 27 0 0 chr5 117207385 117207422 -85878110 + (TG)n Simple_repeat Simple_repeat 2 38 0 592 302 103 29 chr5 117207996 117208238 -85877294 - MIR SINE MIR 0 262 3 28 86 0 0 chr5 117208391 117208461 -85877071 + AT_rich Low_complexity Low_complexity 1 70 0 2287 77 13 3 chr5 117208647 117208947 -85876585 + AluSc SINE Alu 1 303 -6 2424 76 0 10 chr5 117211343 117211657 -85873875 + AluY SINE Alu 1 311 0 467 198 0 0 chr5 117211730 117211811 -85873721 - L1MA9 LINE L1 -52 6260 6180 2317 148 25 38 chr5 117211813 117212258 -85873274 - L1MA9 LINE L1 -231 6081 5643 260 130 22 0 chr5 117212296 117212342 -85873190 - MLT1I LTR MaLR -358 51 5 750 254 140 12 chr5 117212348 117212683 -85872849 - HAL1 LINE L1 -910 1597 1220 * 1517 251 124 43 chr5 117212664 117213365 -85872167 - HAL1 LINE L1 -1510 997 240 1790 110 3 60 chr5 117213663 117213752 -85871780 + AluSq SINE Alu 30 122 -191 2113 125 6 10 chr5 117213752 117214065 -85871467 - AluSq SINE Alu -1 312 1 1790 110 3 60 chr5 117214065 117214276 -85871256 + AluSq SINE Alu 122 313 0 378 0 0 0 chr5 117214873 117214915 -85870617 + (TG)n Simple_repeat Simple_repeat 1 42 0 209 286 32 0 chr5 117215750 117215813 -85869719 + (ATG)n Simple_repeat Simple_repeat 2 66 0 510 307 69 11 chr5 117215835 117216024 -85869508 - MIR SINE MIR -13 249 50 228 218 0 0 chr5 117217406 117217461 -85868071 + (TGGG)n Simple_repeat Simple_repeat 1 55 0 2028 133 4 0 chr5 117217461 117217740 -85867792 - AluSg SINE Alu -30 280 1 691 293 74 70 chr5 117218669 117219199 -85866333 + MLT1K LTR MaLR 47 578 -10 242 220 0 20 chr5 117219813 117219863 -85865669 + L2 LINE L2 3261 3309 -4 22 0 0 0 chr5 117221919 117221941 -85863591 + AT_rich Low_complexity Low_complexity 1 22 0 1631 150 107 26 chr5 117222207 117222554 -85862978 - THE1C LTR MaLR 0 375 1 9414 105 11 123 chr5 117222554 117223954 -85861578 - THE1C-int LTR MaLR 0 1580 420 2243 121 3 0 chr5 117223954 117224260 -85861272 + AluSx SINE Alu 6 312 0 9414 105 11 123 chr5 117224260 117224638 -85860894 - THE1C-int LTR MaLR -1160 420 1 1912 128 69 28 chr5 117224638 117224998 -85860534 - THE1C LTR MaLR 0 375 1 29 60 0 0 chr5 117225513 117225563 -85859969 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr5 117226646 117226675 -85858857 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr5 117227060 117227090 -85858442 + AT_rich Low_complexity Low_complexity 1 30 0 2478 70 0 3 chr5 117227189 117227501 -85858031 - AluY SINE Alu 0 311 1 300 364 16 0 chr5 117228241 117228362 -85857170 + L3 LINE CR1 1448 1570 -7 2901 0 0 0 chr5 117228679 117228989 -85856543 + AluYa5 SINE Alu 1 310 -1 222 37 0 0 chr5 117228989 117229016 -85856516 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 117229824 117229844 -85855688 + (TG)n Simple_repeat Simple_repeat 1 20 0 2443 70 0 0 chr5 117229972 117230273 -85855259 + AluSg1 SINE Alu 1 301 -8 27 73 0 0 chr5 117231704 117231759 -85853773 + AT_rich Low_complexity Low_complexity 1 55 0 253 237 26 0 chr5 117231819 117231895 -85853637 - HAL1 LINE L1 -109 2398 2321 276 268 5 107 chr5 117231991 117232215 -85853317 - HAL1 LINE L1 -420 2087 1887 2358 273 148 50 chr5 117232342 117234071 -85851461 - HAL1 LINE L1 -608 1899 2 22 0 0 0 chr5 117234643 117234665 -85850867 + AT_rich Low_complexity Low_complexity 1 22 0 982 322 48 6 chr5 117234665 117235022 -85850510 + L2 LINE L2 2397 2768 -546 2379 88 0 10 chr5 117235364 117235669 -85849863 - AluY SINE Alu -9 302 1 259 326 134 41 chr5 117235681 117236015 -85849517 + L2 LINE L2 2782 3142 -171 1237 192 21 0 chr5 117236016 117236250 -85849282 - MLT1A1 LTR MaLR 0 365 127 2352 102 0 0 chr5 117236251 117236554 -85848978 + AluSc SINE Alu 1 303 -6 323 328 33 57 chr5 117236571 117236693 -85848839 + L2 LINE L2 3138 3256 -16 327 288 34 25 chr5 117237076 117237194 -85848338 - MIR SINE MIR -56 206 88 1674 204 70 62 chr5 117237994 117238495 -85847037 - MLT1D LTR MaLR 0 505 1 2262 78 3 3 chr5 117238635 117238929 -85846603 + AluY SINE Alu 1 294 -17 2451 52 0 32 chr5 117239174 117239483 -85846049 + AluY SINE Alu 1 299 -12 2365 60 33 0 chr5 117240335 117240636 -85844896 + AluY SINE Alu 1 311 0 460 142 97 58 chr5 117240749 117240904 -85844628 + MER53 DNA DNA 1 161 -28 778 164 58 8 chr5 117241525 117241695 -85843837 + LTR47A LTR ERVL 261 452 0 21 36 0 0 chr5 117242048 117242076 -85843456 + AT_rich Low_complexity Low_complexity 1 28 0 323 235 12 59 chr5 117242217 117242302 -85843230 + MLT1D LTR MaLR 1 81 -424 1051 211 83 35 chr5 117242438 117242820 -85842712 + MLT1D LTR MaLR 114 490 -15 455 294 44 6 chr5 117242917 117243077 -85842455 - MIR SINE MIR -5 257 92 24 0 0 0 chr5 117243730 117243754 -85841778 + AT_rich Low_complexity Low_complexity 1 24 0 250 344 69 15 chr5 117243785 117243916 -85841616 + L2 LINE L2 3163 3300 -13 359 222 143 16 chr5 117244221 117244347 -85841185 - MLT1K LTR MaLR -76 512 371 289 346 19 10 chr5 117244427 117244531 -85841001 - MLT1K LTR MaLR -346 242 138 1309 182 29 12 chr5 117246863 117247105 -85838427 + AluJo SINE Alu 47 292 -20 597 284 84 40 chr5 117248150 117248400 -85837132 + L2 LINE L2 3051 3311 -2 256 297 0 0 chr5 117249585 117249649 -85835883 + CT-rich Low_complexity Low_complexity 4 67 0 237 305 136 7 chr5 117249749 117249903 -85835629 + MIR SINE MIR 32 205 -57 1876 88 20 0 chr5 117250170 117250420 -85835112 + AluY SINE Alu 45 299 -12 360 0 0 0 chr5 117251072 117251112 -85834420 + (TTA)n Simple_repeat Simple_repeat 2 41 0 2156 113 3 0 chr5 117251181 117251472 -85834060 - AluY SINE Alu -19 292 1 428 111 0 0 chr5 117252689 117252761 -85832771 - AluY SINE Alu 0 312 241 1012 76 15 0 chr5 117252761 117252893 -85832639 - AluY SINE Alu -104 207 74 667 313 78 41 chr5 117253055 117253683 -85831849 - L2 LINE L2 0 3313 2667 2440 80 0 0 chr5 117253697 117253996 -85831536 + AluY SINE Alu 3 301 -10 2288 89 0 32 chr5 117254070 117254386 -85831146 + AluSg1 SINE Alu 1 306 -3 24 53 0 0 chr5 117254412 117254450 -85831082 + AT_rich Low_complexity Low_complexity 1 38 0 1721 189 42 127 chr5 117254680 117255183 -85830349 - MLT2D LTR ERVL 0 464 5 565 303 35 15 chr5 117255789 117255987 -85829545 + MIR SINE MIR 2 203 -59 207 0 0 0 chr5 117256494 117256517 -85829015 + (T)n Simple_repeat Simple_repeat 1 23 0 2312 105 0 3 chr5 117256913 117257227 -85828305 + AluSq SINE Alu 1 313 0 346 65 32 32 chr5 117257227 117257289 -85828243 + (GGAA)n Simple_repeat Simple_repeat 4 65 0 213 313 100 0 chr5 117257608 117257688 -85827844 - MIR3 SINE MIR -8 200 113 194 119 48 0 chr5 117257839 117257881 -85827651 + GA-rich Low_complexity Low_complexity 5 48 0 960 212 122 4 chr5 117258015 117258270 -85827262 - MER67D LTR ERV1 -6 508 224 559 200 67 0 chr5 117258294 117258399 -85827133 - FLAM_A SINE Alu -30 112 1 825 167 105 0 chr5 117258401 117258623 -85826909 - MER67D LTR ERV1 -359 155 4 195 297 198 9 chr5 117258720 117258831 -85826701 - MIR SINE MIR -61 147 16 338 331 132 19 chr5 117259048 117259314 -85826218 - L2 LINE L2 -8 3305 3010 747 263 31 57 chr5 117259369 117259597 -85825935 - MIR SINE MIR 0 262 41 356 341 28 22 chr5 117259630 117259812 -85825720 - L2 LINE L2 -410 2904 2722 21 71 0 0 chr5 117262065 117262107 -85823425 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 117262883 117262904 -85822628 + AT_rich Low_complexity Low_complexity 1 21 0 258 246 29 14 chr5 117263215 117263284 -85822248 + L2 LINE L2 3240 3309 -4 351 0 0 0 chr5 117263684 117263723 -85821809 + (TG)n Simple_repeat Simple_repeat 2 40 0 727 264 194 63 chr5 117263984 117264525 -85821007 - MLT1G LTR MaLR 0 590 8 7835 179 62 22 chr5 117265423 117267018 -85818514 - MER52A LTR ERV1 0 1755 1 226 206 29 0 chr5 117268218 117268286 -85817246 + (TA)n Simple_repeat Simple_repeat 1 70 0 2388 70 0 7 chr5 117268652 117268952 -85816580 + AluY SINE Alu 1 298 -13 891 84 34 0 chr5 117269152 117269319 -85816213 - AluSg/x SINE Alu 0 330 160 1159 97 0 0 chr5 117269590 117269735 -85815797 - AluSq/x SINE Alu -167 145 1 25 0 0 0 chr5 117273245 117273270 -85812262 + AT_rich Low_complexity Low_complexity 1 25 0 1775 140 8 0 chr5 117273271 117273528 -85812004 - AluSx SINE Alu -21 291 33 1015 179 88 124 chr5 117273654 117274096 -85811436 - LTR23 LTR ERV1 0 437 12 1977 194 3 21 chr5 117274401 117274788 -85810744 - LOR1b LTR ERV1 0 461 82 1427 130 14 5 chr5 117274756 117274979 -85810553 + MER50 LTR ERV1 487 711 -23 * 2112 126 13 7 chr5 117275417 117275727 -85809805 + AluSx SINE Alu 1 312 0 300 274 200 0 chr5 117277681 117277816 -85807716 + L2 LINE L2 3142 3303 -10 462 288 9 7 chr5 117278122 117278262 -85807270 + L1MC/D LINE L1 5490 5627 -722 2462 71 0 0 chr5 117278387 117278684 -85806848 + AluY SINE Alu 1 297 -14 2105 114 0 0 chr5 117278869 117279173 -85806359 + AluSc SINE Alu 1 304 0 27 0 0 0 chr5 117279198 117279225 -85806307 + AT_rich Low_complexity Low_complexity 1 27 0 228 293 66 9 chr5 117279384 117279490 -85806042 + MIR SINE MIR 50 161 -101 427 322 19 29 chr5 117279516 117279721 -85805811 - MIR SINE MIR -57 205 3 1476 149 173 10 chr5 117279732 117280027 -85805505 - MSTA LTR MaLR 0 428 86 3706 91 234 42 chr5 117280029 117280125 -85805407 - LTR12 LTR ERV1 -2 824 748 2250 109 0 3 chr5 117280125 117280429 -85805103 + AluY SINE Alu 1 303 -8 3706 91 234 42 chr5 117280429 117281023 -85804509 - LTR12 LTR ERV1 -78 748 1 856 221 38 52 chr5 117281103 117281393 -85804139 - pTR5 LTR ERV1 -1410 1028 743 568 157 0 0 chr5 117281393 117281482 -85804050 - MSTA LTR MaLR -339 89 1 2162 127 0 0 chr5 117281602 117281893 -85803639 - AluSc SINE Alu -16 293 3 1295 114 0 11 chr5 117281979 117282163 -85803369 + AluSg/x SINE Alu 103 284 -26 21 0 0 0 chr5 117282249 117282270 -85803262 + AT_rich Low_complexity Low_complexity 1 21 0 350 318 8 16 chr5 117282332 117282461 -85803071 + CT-rich Low_complexity Low_complexity 1 128 0 1975 113 67 0 chr5 117288246 117288530 -85797002 + AluSx SINE Alu 1 303 -9 2004 249 102 36 chr5 117288631 117289347 -85796185 - LTR41 LTR ERVL -10 763 1 2907 178 72 50 chr5 117289439 117290103 -85795429 + MER39 LTR ERV1 29 707 0 737 234 73 44 chr5 117290628 117290876 -85794656 + MER39-int LTR ERV1 1377 1631 -4700 1976 181 19 60 chr5 117290878 117290926 -85794606 - MSTB1 LTR MaLR -2 430 382 2091 132 0 3 chr5 117290926 117291222 -85794310 - AluSq SINE Alu -18 295 1 1976 181 19 60 chr5 117291222 117291450 -85794082 - MSTB1 LTR MaLR -50 382 146 1865 163 47 41 chr5 117291450 117291812 -85793720 - THE1B LTR MaLR 0 364 1 11643 99 7 0 chr5 117291812 117293381 -85792151 - THE1B-int LTR MaLR 0 1580 1 2175 117 50 39 chr5 117293381 117293741 -85791791 - THE1B LTR MaLR 0 364 1 1976 181 19 60 chr5 117293741 117293893 -85791639 - MSTB1 LTR MaLR -283 149 17 2099 109 17 0 chr5 117293899 117294193 -85791339 - AluSp SINE Alu -14 299 1 257 159 127 0 chr5 117294224 117294287 -85791245 + MER39-int LTR ERV1 1988 2058 -3888 1448 249 13 42 chr5 117294308 117294686 -85790846 + MER39-int LTR ERV1 1908 2274 -4057 262 213 0 0 chr5 117294684 117294731 -85790801 + MER39-int LTR ERV1 295 341 -7196 * 748 252 26 19 chr5 117295011 117295357 -85790175 + MER39-int LTR ERV1 753 2714 -3617 520 173 19 160 chr5 117295360 117295522 -85790010 - MER54A LTR ERVL -489 340 1 713 266 9 9 chr5 117295666 117295880 -85789652 + MER39-int LTR ERV1 1908 2121 -2750 393 309 8 24 chr5 117296039 117296165 -85789367 + MER39-int LTR ERV1 3264 3387 -2944 431 173 61 103 chr5 117296255 117296366 -85789166 + MER39-int LTR ERV1 1725 1824 -3299 2113 128 0 0 chr5 117296366 117296656 -85788876 - AluY SINE Alu -21 290 1 431 173 61 103 chr5 117296656 117296758 -85788774 + MER39-int LTR ERV1 1824 1929 -3194 24 77 0 0 chr5 117296764 117296816 -85788716 + AT_rich Low_complexity Low_complexity 1 52 0 4962 177 77 70 chr5 117296941 117297768 -85787764 + MER39-int LTR ERV1 3508 4328 -2003 2234 109 0 6 chr5 117297768 117298079 -85787453 + AluY SINE Alu 1 309 -2 4962 177 77 70 chr5 117298079 117298753 -85786779 + MER39-int LTR ERV1 4328 5023 -1308 1974 154 7 0 chr5 117298753 117299051 -85786481 + AluSx SINE Alu 2 301 -11 4962 177 77 70 chr5 117299051 117299117 -85786415 + MER39-int LTR ERV1 5023 5087 -1244 1189 129 39 142 chr5 117299097 117299434 -85786098 - LTR12 LTR ERV1 -388 1798 55 * 264 231 0 0 chr5 117299446 117299498 -85786034 - LTR30 LTR ERV1 -670 52 1 2627 142 16 56 chr5 117299498 117299668 -85785864 + MER39-int LTR ERV1 5061 5236 -1095 2093 142 3 0 chr5 117299668 117299977 -85785555 + AluY SINE Alu 1 310 -1 2627 142 16 56 chr5 117299977 117300361 -85785171 + MER39-int LTR ERV1 5236 5593 -738 608 192 34 132 chr5 117300360 117300701 -85784831 + MER39-int LTR ERV1 4594 6181 -150 * 2930 188 75 20 chr5 117300759 117301386 -85784146 + MER39 LTR ERV1 1 702 -5 2014 119 0 0 chr5 117301543 117301820 -85783712 - AluSq SINE Alu -16 297 21 2361 84 0 3 chr5 117301894 117302192 -85783340 - AluY SINE Alu -14 297 1 182 188 0 0 chr5 117303774 117303806 -85781726 - MIR SINE MIR -120 142 111 218 184 0 0 chr5 117304104 117304142 -85781390 + (TAG)n Simple_repeat Simple_repeat 3 40 0 286 317 42 33 chr5 117304315 117304435 -85781097 - MIR3 SINE MIR -21 187 67 617 322 101 29 chr5 117304802 117305145 -85780387 + MLT1J2 LTR MaLR 64 411 -39 28 61 0 0 chr5 117306347 117306396 -85779136 + AT_rich Low_complexity Low_complexity 1 49 0 2023 128 0 38 chr5 117306532 117306851 -85778681 + AluSq SINE Alu 1 307 -6 184 106 0 64 chr5 117307509 117307556 -85777976 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 219 36 0 0 chr5 117307639 117307667 -85777865 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 180 0 0 0 chr5 117308341 117308361 -85777171 + (TTG)n Simple_repeat Simple_repeat 2 21 0 22 56 0 0 chr5 117308714 117308750 -85776782 + AT_rich Low_complexity Low_complexity 1 36 0 2341 82 0 7 chr5 117311614 117311919 -85773613 + AluY SINE Alu 1 303 -8 21 0 0 0 chr5 117312162 117312183 -85773349 + AT_rich Low_complexity Low_complexity 1 21 0 2014 92 26 7 chr5 117312644 117312916 -85772616 - AluSc SINE Alu -32 277 1 26 0 0 0 chr5 117313175 117313201 -85772331 + AT_rich Low_complexity Low_complexity 1 26 0 624 269 76 34 chr5 117313275 117313513 -85772019 - MIR SINE MIR 0 262 15 1052 134 12 12 chr5 117313634 117313832 -85771700 + AluJo SINE Alu 121 318 0 2319 88 10 0 chr5 117314620 117314915 -85770617 - AluSx SINE Alu -12 300 3 210 156 0 0 chr5 117314979 117315024 -85770508 + CT-rich Low_complexity Low_complexity 2 46 0 564 114 0 0 chr5 117315125 117315204 -85770328 + AluSg/x SINE Alu 216 294 -18 23 0 0 0 chr5 117315875 117315898 -85769634 + AT_rich Low_complexity Low_complexity 1 23 0 258 259 0 0 chr5 117317312 117317366 -85768166 + CT-rich Low_complexity Low_complexity 4 57 0 567 338 36 26 chr5 117317782 117318090 -85767442 + L2 LINE L2 2165 2475 -839 2270 64 7 3 chr5 117318091 117318402 -85767130 - AluY SINE Alu 0 312 1 24 53 0 0 chr5 117318453 117318491 -85767041 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 117318872 117318894 -85766638 + AT_rich Low_complexity Low_complexity 1 22 0 2229 117 3 0 chr5 117318956 117319263 -85766269 - AluYa5 SINE Alu -3 308 1 237 182 0 0 chr5 117319394 117319438 -85766094 + L2 LINE L2 3269 3312 -1 2182 128 0 0 chr5 117319622 117319927 -85765605 + AluSg SINE Alu 1 305 -5 1831 170 3 3 chr5 117319955 117320249 -85765283 + AluSx SINE Alu 1 294 -18 2066 122 0 26 chr5 117320251 117320563 -85764969 + AluSg SINE Alu 1 304 -6 901 223 59 44 chr5 117320564 117320713 -85764819 - L1ME3 LINE L1 -58 6104 5948 1649 190 64 21 chr5 117320713 117321087 -85764445 + MLT1B LTR MaLR 1 390 0 901 223 59 44 chr5 117321087 117321210 -85764322 - L1ME3 LINE L1 -214 5948 5828 1109 221 33 121 chr5 117321564 117321708 -85763824 - L1ME3 LINE L1 -346 5818 5663 2462 84 0 0 chr5 117321708 117322017 -85763515 - AluSc SINE Alu 0 309 1 1109 221 33 121 chr5 117322017 117322389 -85763143 - L1ME3 LINE L1 -501 5663 5366 2111 128 3 0 chr5 117322389 117322685 -85762847 + AluSg1 SINE Alu 2 298 -11 1109 221 33 121 chr5 117322685 117322830 -85762702 - L1ME3 LINE L1 -798 5366 5210 1144 307 23 8 chr5 117322903 117323379 -85762153 + L1ME3A LINE L1 5505 5987 -183 2431 229 22 11 chr5 117323379 117323933 -85761599 - MLT1F1 LTR MaLR 0 567 8 411 206 7 99 chr5 117326270 117326411 -85759121 + MIR SINE MIR 122 249 -13 201 239 45 45 chr5 117326863 117326930 -85758602 - L2 LINE L2 -6 3266 3200 324 341 22 0 chr5 117327757 117327848 -85757684 - MER5A DNA MER1_type -88 101 9 1101 93 0 7 chr5 117329409 117329583 -85755949 - AluSc SINE Alu 0 304 132 2409 73 0 3 chr5 117329583 117329883 -85755649 - AluY SINE Alu -12 299 1 416 331 94 49 chr5 117330037 117330490 -85755042 + L2 LINE L2 2717 3273 -40 5115 81 0 4 chr5 117330798 117331489 -85754043 + L1PA8A LINE L1 5444 6131 0 182 390 21 11 chr5 117332121 117332216 -85753316 - L3 LINE CR1 -1423 154 59 2406 77 0 6 chr5 117332831 117333142 -85752390 + AluY SINE Alu 1 309 -2 32 0 0 0 chr5 117333785 117333817 -85751715 + AT_rich Low_complexity Low_complexity 1 32 0 301 355 33 8 chr5 117334258 117334379 -85751153 - MIR SINE MIR -117 145 22 1927 193 148 21 chr5 117334469 117334804 -85750728 - MER70A LTR ERVL 0 472 72 2177 120 0 0 chr5 117334804 117335104 -85750428 - AluSc SINE Alu -9 300 1 1927 193 148 21 chr5 117335104 117335187 -85750345 - MER70A LTR ERVL -400 72 1 1648 74 0 0 chr5 117335318 117335521 -85750011 - AluY SINE Alu -10 301 99 29 28 0 0 chr5 117335708 117335744 -85749788 + AT_rich Low_complexity Low_complexity 1 36 0 258 301 36 0 chr5 117336666 117336749 -85748783 - MIR SINE MIR -76 132 47 440 198 113 0 chr5 117336754 117336860 -85748672 - MIR SINE MIR -72 190 73 291 267 160 8 chr5 117337037 117337168 -85748364 - MIR SINE MIR -6 256 106 1322 198 28 82 chr5 117337198 117337359 -85748173 + MLT1A2 LTR MaLR 3 171 -203 2294 115 0 0 chr5 117337359 117337672 -85747860 + AluSq SINE Alu 1 313 0 1322 198 28 82 chr5 117337672 117337688 -85747844 + MLT1A2 LTR MaLR 171 186 -188 1632 177 20 90 chr5 117337688 117338078 -85747454 + MLT1A1 LTR MaLR 1 363 -2 1322 198 28 82 chr5 117338078 117338288 -85747244 + MLT1A2 LTR MaLR 186 370 -4 266 253 27 0 chr5 117338425 117338500 -85747032 - MIR SINE MIR -92 116 40 1193 137 112 154 chr5 117339462 117339909 -85745623 - THE1C LTR MaLR 0 428 1 292 295 155 16 chr5 117339970 117340099 -85745433 + MIR SINE MIR 107 253 -9 1711 213 39 41 chr5 117341320 117341833 -85743699 + Charlie1b DNA MER1_type 8 519 -4 254 305 114 0 chr5 117341884 117342015 -85743517 + MLT1J1 LTR MaLR 9 154 -292 237 310 0 40 chr5 117342219 117342319 -85743213 + MLT1I LTR MaLR 314 409 0 184 326 81 58 chr5 117343649 117343735 -85741797 - L2 LINE L2 -219 3053 2966 395 355 21 5 chr5 117343959 117344148 -85741384 - L2 LINE L2 -604 2710 2519 202 28 28 28 chr5 117344218 117344254 -85741278 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 1839 196 0 0 chr5 117344360 117344672 -85740860 - AluJb SINE Alu 0 312 1 476 266 19 19 chr5 117344690 117344848 -85740684 + L2 LINE L2 3150 3307 -6 402 333 11 23 chr5 117344905 117345082 -85740450 - L2 LINE L2 -955 2359 2185 2259 148 3 24 chr5 117346112 117346484 -85739048 - THE1B LTR MaLR 0 364 1 21 107 0 0 chr5 117346763 117346847 -85738685 + AT_rich Low_complexity Low_complexity 1 84 0 206 333 0 0 chr5 117346944 117347007 -85738525 - MIR SINE MIR -119 89 27 321 330 40 0 chr5 117348971 117349071 -85736461 - L2 LINE L2 -9 3304 3201 183 195 91 65 chr5 117349230 117349307 -85736225 - L2 LINE L2 -2797 517 439 220 265 84 12 chr5 117350063 117350146 -85735386 - MER5B DNA MER1_type 0 178 90 193 297 81 14 chr5 117350085 117350159 -85735373 + MER5A DNA MER1_type 34 112 -77 * 2408 71 0 3 chr5 117350953 117351247 -85734285 - AluY SINE Alu -18 293 1 31 58 0 0 chr5 117351849 117351901 -85733631 + AT_rich Low_complexity Low_complexity 1 52 0 207 0 0 0 chr5 117353624 117353647 -85731885 + (TC)n Simple_repeat Simple_repeat 2 24 0 13403 152 34 7 chr5 117353845 117356137 -85729395 - Tigger1 DNA MER2_type 0 2418 59 180 0 0 0 chr5 117356137 117356157 -85729375 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13403 152 34 7 chr5 117356157 117356218 -85729314 - Tigger1 DNA MER2_type -2359 59 1 300 27 0 0 chr5 117456442 117456479 -85629053 + (CA)n Simple_repeat Simple_repeat 1 37 0 873 300 125 41 chr5 117456494 117457250 -85628282 + L1M4 LINE L1 3528 4346 -1800 320 248 120 68 chr5 117458280 117458413 -85627119 + MIR SINE MIR 48 187 -75 463 289 23 8 chr5 117458456 117458584 -85626948 + LTR33 LTR ERVL 30 159 -362 3458 217 84 20 chr5 117458821 117459969 -85625563 - L1M4c LINE L1 -4689 1957 738 2018 261 30 36 chr5 117459970 117460575 -85624957 - L1M4c LINE L1 -5935 607 7 204 40 0 0 chr5 117461498 117461523 -85624009 + (TA)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr5 117461558 117461581 -85623951 + AT_rich Low_complexity Low_complexity 1 23 0 315 0 0 0 chr5 117461853 117461888 -85623644 + (CA)n Simple_repeat Simple_repeat 2 36 0 250 330 20 20 chr5 117462057 117462157 -85623375 + MIR SINE MIR 13 112 -150 21 0 0 0 chr5 117463113 117463134 -85622398 + AT_rich Low_complexity Low_complexity 1 21 0 306 255 61 20 chr5 117463147 117463245 -85622287 - MIR SINE MIR -35 227 126 183 229 0 0 chr5 117463756 117463791 -85621741 + MER5A DNA MER1_type 155 189 0 619 209 98 13 chr5 117464025 117464178 -85621354 + MLT1D LTR MaLR 3 168 -337 904 188 111 10 chr5 117464183 117464391 -85621141 + MLT1D LTR MaLR 277 505 0 187 333 45 0 chr5 117464394 117464460 -85621072 + L2 LINE L2 3203 3271 -42 424 261 44 67 chr5 117464466 117464646 -85620886 - MER5B DNA MER1_type 0 178 3 722 263 71 21 chr5 117464679 117464919 -85620613 + MIR SINE MIR 3 254 -8 264 59 0 0 chr5 117465313 117465347 -85620185 + (T)n Simple_repeat Simple_repeat 1 34 0 228 67 0 0 chr5 117465991 117466021 -85619511 + (T)n Simple_repeat Simple_repeat 1 30 0 3102 70 5 14 chr5 117469034 117469463 -85616069 + L1PA7 LINE L1 5699 6123 -31 2691 86 12 9 chr5 117469563 117471824 -85613708 - L1P3 LINE L1 -422 5732 3386 2269 85 0 25 chr5 117471824 117472143 -85613389 - AluY SINE Alu 0 311 1 2691 86 12 9 chr5 117472143 117472610 -85612922 - L1P3 LINE L1 -2768 3386 2922 * 11894 105 8 9 chr5 117472602 117474395 -85611137 + L1P LINE L1 1323 3114 -3032 1884 135 21 0 chr5 117474636 117474917 -85610615 + AluSp SINE Alu 1 287 -26 436 328 30 25 chr5 117475293 117475491 -85610041 - MIR SINE MIR -44 218 20 212 161 16 0 chr5 117477383 117477445 -85608087 + (TA)n Simple_repeat Simple_repeat 1 63 0 50 59 0 0 chr5 117477833 117477918 -85607614 + AT_rich Low_complexity Low_complexity 1 85 0 338 61 20 0 chr5 117478590 117478639 -85606893 + (TG)n Simple_repeat Simple_repeat 2 51 0 24 67 0 0 chr5 117478789 117478834 -85606698 + AT_rich Low_complexity Low_complexity 1 45 0 1583 201 4 4 chr5 117480913 117481186 -85604346 + AluJb SINE Alu 3 275 -37 503 323 85 12 chr5 117481202 117481521 -85604011 + L1M4 LINE L1 2211 2552 -3594 23 0 0 0 chr5 117481606 117481629 -85603903 + AT_rich Low_complexity Low_complexity 1 23 0 1436 245 49 38 chr5 117481681 117482187 -85603345 - L1ME1 LINE L1 -222 6338 5830 970 229 92 38 chr5 117482209 117482711 -85602821 - L1ME1 LINE L1 -2358 4182 3654 939 222 111 14 chr5 117482691 117483042 -85602490 - L1ME1 LINE L1 -3194 3346 2962 * 376 304 54 16 chr5 117483047 117483231 -85602301 - L1ME1 LINE L1 -4333 2207 2017 995 256 56 67 chr5 117483236 117484003 -85601529 - L1ME1 LINE L1 -4870 1670 929 187 53 26 26 chr5 117484161 117484199 -85601333 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 200 297 0 0 chr5 117486535 117486599 -85598933 + CT-rich Low_complexity Low_complexity 1 64 0 516 329 39 53 chr5 117486917 117487254 -85598278 - L1ME1 LINE L1 -6191 349 18 * 638 316 142 24 chr5 117487249 117487756 -85597776 + L1M4 LINE L1 2694 3260 -2886 32 57 0 0 chr5 117487777 117487830 -85597702 + AT_rich Low_complexity Low_complexity 1 53 0 426 311 120 51 chr5 117488085 117488186 -85597346 + L2 LINE L2 2726 2819 -494 1910 139 27 14 chr5 117488186 117488481 -85597051 - AluSx SINE Alu -11 301 3 426 311 120 51 chr5 117488481 117488887 -85596645 + L2 LINE L2 2819 3281 -32 257 279 29 0 chr5 117488946 117489014 -85596518 - MIR3 SINE MIR -31 177 108 3312 49 0 16 chr5 117489233 117489662 -85595870 - L1PA7 LINE L1 -11 6143 5722 2345 89 28 0 chr5 117489663 117490024 -85595508 + L1P LINE L1 4957 5327 -819 1615 155 24 4 chr5 117490016 117490324 -85595208 - L1MA9 LINE L1 -198 6114 5800 * 333 0 0 0 chr5 117490808 117490845 -85594687 + (TG)n Simple_repeat Simple_repeat 1 37 0 316 351 137 8 chr5 117491896 117492027 -85593505 - L2 LINE L2 -3 3269 3122 272 242 72 92 chr5 117492093 117492246 -85593286 + MER5A DNA MER1_type 29 178 0 207 362 98 25 chr5 117493022 117493185 -85592347 - L2 LINE L2 -671 2643 2469 1873 166 8 17 chr5 117493316 117493678 -85591854 - MLT1A1 LTR MaLR 0 365 7 604 269 30 106 chr5 117494031 117494362 -85591170 + L2 LINE L2 3008 3313 0 577 167 18 181 chr5 117498563 117498790 -85586742 + 7SK RNA RNA 4 193 0 1437 89 0 0 chr5 117499246 117499436 -85586096 + L1PA7 LINE L1 5957 6146 -8 2159 113 3 0 chr5 117501361 117501661 -85583871 + AluSx SINE Alu 1 301 -11 2263 100 17 3 chr5 117506941 117507240 -85578292 - AluSq SINE Alu -9 304 2 205 264 155 23 chr5 117507766 117507895 -85577637 + L2 LINE L2 3081 3226 -87 479 273 26 0 chr5 117507974 117508128 -85577404 - MER58B DNA MER1_type -3 338 181 1962 93 0 4 chr5 117508157 117508414 -85577118 + AluY SINE Alu 1 256 -55 189 0 0 0 chr5 117508465 117508486 -85577046 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2094 154 0 0 chr5 117509355 117509666 -85575866 + AluSx SINE Alu 1 311 -1 265 226 0 0 chr5 117510282 117510335 -85575197 + FLAM SINE Alu 72 124 -9 2375 93 3 3 chr5 117510345 117510657 -85574875 + AluSx SINE Alu 1 312 0 2197 89 3 24 chr5 117510819 117511112 -85574420 + AluSc SINE Alu 1 287 -22 266 241 26 0 chr5 117511116 117511232 -85574300 + L1ME3 LINE L1 5194 5312 -834 688 167 0 9 chr5 117511278 117511392 -85574140 - FLAM_C SINE Alu -30 113 1 367 272 46 9 chr5 117511392 117511605 -85573927 + L1ME3 LINE L1 5300 5473 -689 248 279 43 25 chr5 117511671 117511832 -85573700 + L1ME3 LINE L1 5608 5771 -391 267 244 12 12 chr5 117511970 117512052 -85573480 + L1ME3 LINE L1 6059 6140 -22 1125 95 7 0 chr5 117512095 117512243 -85573289 + AluSp SINE Alu 1 149 -164 2086 223 30 4 chr5 117512504 117512976 -85572556 + LTR42 LTR ERVL 1 484 -11 795 205 125 50 chr5 117513062 117513365 -85572167 - MLT1A1 LTR MaLR -7 358 33 1999 136 0 4 chr5 117513576 117513856 -85571676 - AluSx SINE Alu -31 281 3 1621 113 0 0 chr5 117513883 117514096 -85571436 - AluSg/x SINE Alu -30 280 68 1589 185 80 51 chr5 117515567 117515612 -85569920 - MER65C LTR ERV1 0 461 419 1901 174 3 0 chr5 117515612 117515917 -85569615 - AluJo SINE Alu -1 311 6 1589 185 80 51 chr5 117515917 117516030 -85569502 - MER65C LTR ERV1 -42 419 311 1514 183 66 17 chr5 117516030 117516319 -85569213 + AluJb SINE Alu 1 303 -9 1589 185 80 51 chr5 117516319 117516607 -85568925 - MER65C LTR ERV1 -150 311 1 444 295 216 0 chr5 117517526 117517665 -85567867 + MER91A DNA MER1_type 2 170 -26 1784 175 10 10 chr5 117518551 117518854 -85566678 - AluJo SINE Alu -9 303 1 1078 208 132 33 chr5 117520210 117520575 -85564957 + MER50 LTR ERV1 334 734 0 203 229 16 0 chr5 117520651 117520712 -85564820 + GA-rich Low_complexity Low_complexity 2 63 0 1997 135 14 0 chr5 117521620 117521916 -85563616 + AluSx SINE Alu 9 308 -4 21 57 0 0 chr5 117522551 117522586 -85562946 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 117524289 117524312 -85561220 + AT_rich Low_complexity Low_complexity 1 23 0 276 204 28 157 chr5 117524753 117524861 -85560671 + L2 LINE L2 3219 3312 -1 27 29 0 0 chr5 117524913 117524947 -85560585 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 117525561 117525583 -85559949 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 117525609 117525633 -85559899 + AT_rich Low_complexity Low_complexity 1 24 0 30 45 0 0 chr5 117526336 117526380 -85559152 + AT_rich Low_complexity Low_complexity 1 44 0 599 319 108 62 chr5 117526423 117527295 -85558237 + L2 LINE L2 1851 2762 -552 242 138 17 0 chr5 117527385 117527443 -85558089 + (CA)n Simple_repeat Simple_repeat 1 59 0 26 74 0 0 chr5 117527807 117527861 -85557671 + AT_rich Low_complexity Low_complexity 1 54 0 26 0 0 0 chr5 117528080 117528106 -85557426 + AT_rich Low_complexity Low_complexity 1 26 0 6950 183 25 54 chr5 117528879 117530667 -85554865 + L1MCa LINE L1 19 2181 -4246 275 189 20 7 chr5 117530667 117530815 -85554717 + (TA)n Simple_repeat Simple_repeat 1 150 0 188 130 22 0 chr5 117530851 117530897 -85554635 + (TA)n Simple_repeat Simple_repeat 1 47 0 225 284 29 0 chr5 117530926 117531028 -85554504 + L1M4 LINE L1 4235 4339 -1807 3446 122 71 79 chr5 117531031 117531778 -85553754 + Tigger2 DNA MER2_type 4 744 -1974 1089 140 27 11 chr5 117531844 117532030 -85553502 + Tigger2 DNA MER2_type 2461 2649 -69 497 269 6 70 chr5 117532170 117532341 -85553191 - L3 LINE CR1 -24 1553 1394 246 353 12 0 chr5 117532347 117532432 -85553100 - L2 LINE L2 -13 3259 3174 * 251 298 149 26 chr5 117532416 117532705 -85552827 - L3 LINE CR1 -193 1384 998 464 173 18 0 chr5 117534839 117534937 -85550595 + L1MA8 LINE L1 6168 6262 -29 1986 185 165 19 chr5 117534937 117535417 -85550115 + MER44D DNA MER2_type 1 605 0 343 141 0 0 chr5 117535460 117535531 -85550001 + L1 LINE L1 4762 4832 -1314 214 26 79 0 chr5 117535551 117535589 -85549943 + A-rich Low_complexity Low_complexity 1 41 0 349 274 12 0 chr5 117535646 117535730 -85549802 - L2 LINE L2 0 3313 3229 297 384 16 0 chr5 117536805 117536930 -85548602 + MIR SINE MIR 6 132 -130 854 205 125 0 chr5 117536936 117537069 -85548463 - L1MA9 LINE L1 0 6312 6197 285 29 0 0 chr5 117537069 117537103 -85548429 + (TG)n Simple_repeat Simple_repeat 1 34 0 854 205 125 0 chr5 117537103 117537201 -85548331 - L1MA9 LINE L1 -115 6197 6054 420 275 9 0 chr5 117537203 117537312 -85548220 + MIR SINE MIR 145 254 -8 28 29 0 0 chr5 117537492 117537527 -85548005 + AT_rich Low_complexity Low_complexity 1 35 0 1887 141 16 3 chr5 117537727 117538033 -85547499 + AluSx SINE Alu 1 310 -2 222 118 0 0 chr5 117538033 117538067 -85547465 + (GGGAA)n Simple_repeat Simple_repeat 3 36 0 382 391 16 27 chr5 117538700 117538884 -85546648 + MER5A DNA MER1_type 8 189 0 7081 47 3 2 chr5 117539010 117540113 -85545419 + L1PA5 LINE L1 5025 6153 -1 363 221 0 0 chr5 117540118 117540195 -85545337 + AluJ/FRAM SINE Alu 224 300 -2 309 276 30 139 chr5 117540204 117540570 -85544962 + HAL1 LINE L1 2 327 -2180 23 0 0 0 chr5 117540784 117540807 -85544725 + AT_rich Low_complexity Low_complexity 1 23 0 221 271 0 0 chr5 117541664 117541723 -85543809 + A-rich Low_complexity Low_complexity 1 59 0 269 283 40 45 chr5 117541891 117542114 -85543418 + HAL1b LINE L1 321 542 -806 21 0 0 0 chr5 117542524 117542545 -85542987 + AT_rich Low_complexity Low_complexity 1 21 0 332 298 98 63 chr5 117542683 117542938 -85542594 + L1M4 LINE L1 2256 2519 -3627 436 300 130 23 chr5 117543096 117543443 -85542089 + L1M4 LINE L1 2896 3279 -2867 394 275 18 0 chr5 117543843 117543952 -85541580 + L1M4 LINE L1 4733 4843 -1303 771 200 35 75 chr5 117543955 117544155 -85541377 + LTR40a LTR ERVL 4 195 -324 568 257 88 0 chr5 117544155 117544381 -85541151 + HAL1 LINE L1 1926 2171 -336 2203 300 147 42 chr5 117547087 117547738 -85537794 + L2 LINE L2 928 1509 -1805 2555 35 0 19 chr5 117547738 117548055 -85537477 - AluY SINE Alu 0 311 1 2203 300 147 42 chr5 117548055 117548888 -85536644 + L2 LINE L2 1509 2568 -746 350 368 16 27 chr5 117548957 117549142 -85536390 + L2 LINE L2 2898 3080 -233 716 255 151 85 chr5 117549162 117549560 -85535972 + MLT1G1 LTR MaLR 1 385 -182 23 0 0 0 chr5 117549663 117549686 -85535846 + AT_rich Low_complexity Low_complexity 1 23 0 735 305 14 32 chr5 117550390 117550669 -85534863 - LTR16A LTR ERVL -5 445 172 942 340 41 68 chr5 117550679 117551566 -85533966 - HERVL LTR ERVL -1125 4529 3667 1730 261 76 30 chr5 117551588 117552155 -85533377 + MLT1E LTR MaLR 1 593 0 250 284 134 30 chr5 117553867 117554001 -85531531 + L2 LINE L2 2593 2740 -574 582 357 101 42 chr5 117554421 117555196 -85530336 - L2 LINE L2 0 3313 2494 1488 73 10 0 chr5 117555196 117555400 -85530132 - L1PA7 LINE L1 -4 6150 5945 582 357 101 42 chr5 117555400 117555425 -85530107 - L2 LINE L2 -819 2494 2472 360 331 31 25 chr5 117555642 117555805 -85529727 + MIR SINE MIR 84 247 -15 45 34 0 0 chr5 117556756 117556815 -85528717 + AT_rich Low_complexity Low_complexity 1 59 0 355 286 0 59 chr5 117557149 117557268 -85528264 + MIR3 SINE MIR 92 203 -5 25 0 0 0 chr5 117557860 117557885 -85527647 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 117560466 117560491 -85525041 + AT_rich Low_complexity Low_complexity 1 25 0 265 264 61 101 chr5 117560675 117560952 -85524580 + L1MC/D LINE L1 5622 5887 -1921 11737 206 24 12 chr5 117561071 117563803 -85521729 + L1PA16 LINE L1 2435 5213 -953 2268 100 0 3 chr5 117563803 117564113 -85521419 + AluY SINE Alu 1 309 -2 11737 206 24 12 chr5 117564113 117564930 -85520602 + L1PA16 LINE L1 5213 6018 -148 6127 162 13 18 chr5 117564930 117566626 -85518906 + L1MA3 LINE L1 4619 6305 0 437 284 7 19 chr5 117566706 117566861 -85518671 + L2 LINE L2 1604 1756 -1558 632 252 60 12 chr5 117566970 117567220 -85518312 - LTR37A LTR ERV1 -26 400 139 187 387 16 0 chr5 117567397 117567459 -85518073 - MIR SINE MIR -150 112 50 * 400 308 116 43 chr5 117567452 117567537 -85517995 + L2 LINE L2 1710 1787 -1527 2085 147 13 31 chr5 117567537 117567919 -85517613 - THE1C LTR MaLR 0 375 1 400 308 116 43 chr5 117567919 117568255 -85517277 + L2 LINE L2 1787 2162 -1152 2322 148 50 2 chr5 117568612 117569011 -85516521 - MSTA LTR MaLR -10 418 1 305 318 157 34 chr5 117569115 117569351 -85516181 + L2 LINE L2 2842 3106 -166 1178 115 0 0 chr5 117569418 117569583 -85515949 + AluSq SINE Alu 149 313 0 270 0 0 0 chr5 117569617 117569647 -85515885 + (CA)n Simple_repeat Simple_repeat 2 31 0 333 355 58 13 chr5 117570213 117570368 -85515164 + L2 LINE L2 3107 3268 -4 24 0 0 0 chr5 117570444 117570468 -85515064 + AT_rich Low_complexity Low_complexity 1 24 0 1557 199 18 6 chr5 117571138 117571474 -85514058 + L1MB3 LINE L1 5830 6169 -14 535 204 0 9 chr5 117571513 117571621 -85513911 + MER57A LTR ERV1 295 401 -2 2796 199 19 6 chr5 117571623 117572155 -85513377 + MER57A-int LTR ERV1 1 539 -6998 1339 171 7 69 chr5 117572193 117572498 -85513034 + MER57A-int LTR ERV1 541 826 -6711 415 250 62 35 chr5 117572567 117572659 -85512873 + MER57A-int LTR ERV1 841 940 -4183 2579 123 57 0 chr5 117572659 117573064 -85512468 - MSTA LTR MaLR 0 428 1 415 250 62 35 chr5 117573064 117573115 -85512417 + MER57A-int LTR ERV1 940 988 -4135 374 131 16 0 chr5 117573115 117573176 -85512356 + MER34C LTR ERV1 155 216 -369 423 238 11 162 chr5 117573284 117573549 -85511983 + MER57A-int LTR ERV1 1167 1391 -3732 269 216 27 0 chr5 117573563 117573637 -85511895 + MER57A-int LTR ERV1 2905 2980 -2966 378 258 0 0 chr5 117573656 117573749 -85511783 + MER57A-int LTR ERV1 3246 3338 -2993 475 230 0 0 chr5 117573808 117573908 -85511624 + MER57A-int LTR ERV1 3354 3453 -2878 854 205 54 46 chr5 117574020 117574540 -85510992 + MER57A-int LTR ERV1 1698 3590 -2673 7765 159 17 40 chr5 117574577 117576157 -85509375 + MER57A-int LTR ERV1 4278 5821 -1716 7439 189 21 11 chr5 117576319 117577797 -85507735 + MER57A-int LTR ERV1 2453 7147 -390 796 154 82 22 chr5 117577797 117577979 -85507553 + LTR54B LTR ERV1 3 195 -303 1118 144 5 26 chr5 117577981 117578176 -85507356 + MER57A-int LTR ERV1 7342 7532 -5 975 164 0 0 chr5 117578179 117578331 -85507201 + MER57A LTR ERV1 1 152 -251 23 92 0 0 chr5 117578346 117578411 -85507121 + AT_rich Low_complexity Low_complexity 1 65 0 259 255 82 31 chr5 117579316 117579414 -85506118 + MIR SINE MIR 92 194 -68 23 0 0 0 chr5 117579977 117580000 -85505532 + AT_rich Low_complexity Low_complexity 1 23 0 372 260 125 24 chr5 117580230 117580438 -85505094 - L1MC5 LINE L1 -281 7680 7452 2068 64 23 0 chr5 117580718 117580984 -85504548 + AluY SINE Alu 1 272 -39 1264 207 4 0 chr5 117581084 117581316 -85504216 - AluJb SINE Alu -79 233 1 5269 174 15 27 chr5 117581320 117583225 -85502307 - L1MA4A LINE L1 -3 7002 5031 2134 124 0 0 chr5 117583225 117583530 -85502002 + AluSx SINE Alu 1 305 0 5269 174 15 27 chr5 117583530 117583910 -85501622 - L1MA4A LINE L1 -1974 5031 4648 2192 126 47 16 chr5 117583910 117584274 -85501258 - THE1C LTR MaLR 0 375 1 8081 100 23 192 chr5 117584275 117586167 -85499365 - THE1C-int LTR MaLR -6 1574 4 1515 188 48 40 chr5 117586170 117586542 -85498990 - THE1C LTR MaLR 0 375 1 2220 202 37 102 chr5 117586544 117587094 -85498438 - L1MA4A LINE L1 -3192 3656 3072 294 29 0 0 chr5 117587094 117587129 -85498403 + (CA)n Simple_repeat Simple_repeat 2 36 0 2220 202 37 102 chr5 117587129 117587990 -85497542 - L1MA4A LINE L1 -3776 3072 2338 336 48 0 0 chr5 117588119 117588161 -85497371 + (CA)n Simple_repeat Simple_repeat 1 42 0 841 229 176 33 chr5 117588716 117589114 -85496418 - LTR16A1 LTR ERVL -2 455 1 242 208 0 19 chr5 117589114 117589167 -85496365 + CT-rich Low_complexity Low_complexity 4 55 0 2115 124 116 10 chr5 117590520 117590907 -85494625 - MSTA LTR MaLR 0 428 1 722 132 125 0 chr5 117591784 117591928 -85493604 - LTR54 LTR ERV1 0 510 349 485 146 0 0 chr5 117592095 117592177 -85493355 + (TC)n Simple_repeat Simple_repeat 1 82 0 2044 99 7 7 chr5 117592184 117592468 -85493064 - AluSc SINE Alu -25 284 1 271 248 92 37 chr5 117592541 117592650 -85492882 - MER91C DNA MER1_type -22 118 4 896 172 10 61 chr5 117593116 117593314 -85492218 + MER20 DNA MER1_type 2 189 -30 640 143 57 36 chr5 117593333 117593473 -85492059 + L1MA6 LINE L1 6148 6290 -10 492 18 0 0 chr5 117594589 117594646 -85490886 + (CA)n Simple_repeat Simple_repeat 2 58 0 5403 133 41 5 chr5 117594875 117595229 -85490303 - L1PA14 LINE L1 0 6161 5821 2800 198 40 32 chr5 117595229 117595859 -85489673 + LTR27 LTR ERV1 2 636 0 5403 133 41 5 chr5 117595859 117596698 -85488834 - L1PA14 LINE L1 -340 5821 4951 8021 159 16 6 chr5 117596698 117598134 -85487398 + L1PA14 LINE L1 3497 4946 -1200 207 390 65 24 chr5 117598138 117598261 -85487271 - MER5A DNA MER1_type -57 132 5 206 136 0 106 chr5 117599178 117599244 -85486288 + (TAAAAA)n Simple_repeat Simple_repeat 6 64 0 1322 177 30 72 chr5 117599598 117599669 -85485863 - MLT2D LTR ERVL -122 292 220 1917 103 4 0 chr5 117599669 117599961 -85485571 + AluSx SINE Alu 29 321 0 1322 177 30 72 chr5 117599961 117600193 -85485339 - MLT2D LTR ERVL -194 220 1 22 0 0 0 chr5 117600293 117600315 -85485217 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 117600444 117600473 -85485059 + AT_rich Low_complexity Low_complexity 1 29 0 770 208 23 6 chr5 117600580 117600753 -85484779 - MER5B DNA MER1_type 0 178 3 441 0 0 0 chr5 117601153 117601202 -85484330 + (TG)n Simple_repeat Simple_repeat 2 50 0 745 238 157 9 chr5 117601352 117601574 -85483958 + LTR50 LTR ERVL 4 258 -537 1475 202 45 34 chr5 117601574 117601930 -85483602 + MER7C DNA MER2_type 1 360 -242 1940 195 46 25 chr5 117602370 117602826 -85482706 + MER31B LTR ERV1 1 661 0 456 258 101 95 chr5 117602897 117603223 -85482309 - L1MCa LINE L1 -1483 4899 4572 476 359 50 29 chr5 117603395 117603771 -85481761 - L1MCa LINE L1 -2084 4298 3915 1177 197 103 30 chr5 117603778 117604078 -85481454 - MER2 DNA MER2_type 0 345 24 360 322 70 43 chr5 117604128 117604429 -85481103 - L1MCa LINE L1 -2502 3880 3572 282 254 90 8 chr5 117604469 117604603 -85480929 - L1MCa LINE L1 -2873 3509 3365 336 102 0 0 chr5 117604648 117604697 -85480835 + (TG)n Simple_repeat Simple_repeat 2 50 0 305 272 78 36 chr5 117605069 117605241 -85480291 - L1MCa LINE L1 -3952 2432 2260 223 188 16 31 chr5 117606057 117606121 -85479411 + T-rich Low_complexity Low_complexity 4 66 0 417 299 18 12 chr5 117606721 117606888 -85478644 - AluSq SINE Alu 0 313 146 24 32 0 0 chr5 117607149 117607180 -85478352 + AT_rich Low_complexity Low_complexity 1 31 0 255 87 65 0 chr5 117607546 117607592 -85477940 + L1 LINE L1 4469 4517 -1629 226 323 21 0 chr5 117608856 117608952 -85476580 + L1PA15-16 LINE L1 1467 1564 -5285 5130 235 57 30 chr5 117608956 117609433 -85476099 + L1PA15-16 LINE L1 1355 1818 -5031 2403 75 0 10 chr5 117609433 117609740 -85475792 + AluY SINE Alu 1 304 -7 2495 61 0 10 chr5 117609745 117610058 -85475474 + AluY SINE Alu 1 310 -1 5130 235 57 30 chr5 117610058 117611150 -85474382 + L1PA15-16 LINE L1 1821 3056 -3793 8803 242 86 24 chr5 117611258 117612068 -85473464 - L1M2 LINE L1 -4119 2730 1972 1911 121 0 4 chr5 117612068 117612333 -85473199 - AluSc SINE Alu -7 302 39 8803 242 86 24 chr5 117612333 117612469 -85473063 - L1M2 LINE L1 -4877 1972 1846 2173 133 0 3 chr5 117612469 117612777 -85472755 - AluSg SINE Alu -3 307 1 8803 242 86 24 chr5 117612777 117614216 -85471316 - L1M2 LINE L1 -5003 1846 169 1509 169 103 26 chr5 117614216 117614564 -85470968 + THE1C LTR MaLR 1 375 0 8803 242 86 24 chr5 117614564 117614744 -85470788 - L1M2 LINE L1 -6680 169 2 2799 222 48 56 chr5 117615031 117615562 -85469970 + L1ME2 LINE L1 4954 5488 -676 1541 202 31 0 chr5 117615562 117615854 -85469678 - AluJo SINE Alu -11 301 1 2799 222 48 56 chr5 117615854 117616524 -85469008 + L1ME2 LINE L1 5488 6155 -9 24 53 0 0 chr5 117617659 117617697 -85467835 + AT_rich Low_complexity Low_complexity 1 38 0 213 39 0 0 chr5 117617939 117617965 -85467567 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr5 117618563 117618601 -85466931 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr5 117619484 117619510 -85466022 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 117619720 117619744 -85465788 + AT_rich Low_complexity Low_complexity 1 24 0 1996 116 84 32 chr5 117619922 117620266 -85465266 - THE1B LTR MaLR 0 364 3 841 285 85 26 chr5 117620992 117621262 -85464270 - MLT1K LTR MaLR -164 424 139 22 56 0 0 chr5 117621353 117621389 -85464143 + AT_rich Low_complexity Low_complexity 1 36 0 2337 200 13 11 chr5 117621515 117621981 -85463551 + MLT1C LTR MaLR 1 467 0 1993 137 7 0 chr5 117622233 117622526 -85463006 + AluSc SINE Alu 1 295 -14 1407 207 24 58 chr5 117622621 117622997 -85462535 - MLT1A1 LTR MaLR 0 365 3 401 266 30 40 chr5 117623527 117623726 -85461806 - L2 LINE L2 -438 2876 2680 246 320 96 0 chr5 117624698 117624823 -85460709 - MIR SINE MIR -54 208 72 370 188 0 94 chr5 117625146 117625231 -85460301 - MIR3 SINE MIR -11 197 121 804 165 0 0 chr5 117626224 117626351 -85459181 - FRAM SINE Alu -19 157 31 1369 132 154 43 chr5 117626576 117626901 -85458631 + MER31B LTR ERV1 1 361 -105 468 181 52 9 chr5 117626901 117627017 -85458515 + MER65B LTR ERV1 1 121 -410 474 59 12 24 chr5 117627478 117627563 -85457969 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 1905 198 51 5 chr5 117627636 117628031 -85457501 - MLT2C2 LTR ERVL -46 418 6 21 0 0 0 chr5 117628684 117628705 -85456827 + AT_rich Low_complexity Low_complexity 1 21 0 2088 99 0 7 chr5 117629261 117629582 -85455950 - AluSg SINE Alu 0 319 1 1574 187 33 0 chr5 117629585 117629886 -85455646 - AluJb SINE Alu 0 311 2 730 322 51 23 chr5 117629892 117630461 -85455071 - L1ME3A LINE L1 -287 5883 5299 618 287 173 32 chr5 117630678 117631152 -85454380 - L1ME3A LINE L1 -1088 5058 4518 967 310 68 16 chr5 117631167 117631910 -85453622 - L1ME3A LINE L1 -1701 4445 3648 361 229 163 54 chr5 117631917 117632083 -85453449 - MIR SINE MIR 0 262 79 632 221 0 21 chr5 117832083 117832223 -85253309 + MER39 LTR ERV1 564 700 -7 1126 256 26 46 chr5 117832333 117832771 -85252761 - MER101B LTR ERV1 0 474 1 427 355 41 0 chr5 117832873 117833045 -85252487 + MER5A DNA MER1_type 11 189 0 23 54 0 0 chr5 117833420 117833457 -85252075 + AT_rich Low_complexity Low_complexity 1 37 0 234 288 0 0 chr5 117833462 117833521 -85252011 - MIR SINE MIR -15 247 189 3286 183 51 3 chr5 117833737 117834364 -85251168 + Tigger1 DNA MER2_type 1 657 -1761 * 6007 152 9 28 chr5 117834357 117834773 -85250759 + Tigger1 DNA MER2_type 901 1323 -1095 180 0 0 0 chr5 117834773 117834793 -85250739 + (TA)n Simple_repeat Simple_repeat 2 21 0 6007 152 9 28 chr5 117834793 117835356 -85250176 + Tigger1 DNA MER2_type 1323 1861 -557 2442 60 0 0 chr5 117835356 117835655 -85249877 + AluY SINE Alu 1 299 -12 6007 152 9 28 chr5 117835655 117835757 -85249775 + Tigger1 DNA MER2_type 1861 1963 -455 1485 155 49 11 chr5 117835779 117836044 -85249488 + Tigger1 DNA MER2_type 2144 2418 0 261 192 19 0 chr5 117836048 117836100 -85249432 - MER103 DNA DNA -76 90 38 28 29 0 0 chr5 117836151 117836186 -85249346 + AT_rich Low_complexity Low_complexity 1 35 0 632 100 0 0 chr5 117836372 117836462 -85249070 - AluSg/x SINE Alu -4 305 216 205 162 0 0 chr5 117836509 117836546 -85248986 + (TG)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 117836603 117836624 -85248908 + AT_rich Low_complexity Low_complexity 1 21 0 1900 171 36 33 chr5 117838525 117838887 -85246645 + THE1B LTR MaLR 1 363 -1 226 266 136 30 chr5 117838966 117839135 -85246397 - L1MC/D LINE L1 -2271 5537 5351 189 154 0 0 chr5 117839190 117839229 -85246303 + (CA)n Simple_repeat Simple_repeat 2 40 0 224 29 0 29 chr5 117839805 117839839 -85245693 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 219 282 0 0 chr5 117843058 117843143 -85242389 + A-rich Low_complexity Low_complexity 2 86 0 23 33 0 0 chr5 117843215 117843245 -85242287 + AT_rich Low_complexity Low_complexity 1 30 0 338 302 157 51 chr5 117843435 117844007 -85241525 + L1MC3 LINE L1 5270 5902 -1906 538 285 81 37 chr5 117844023 117844269 -85241263 + MIR SINE MIR 6 262 0 27 49 0 0 chr5 117844568 117844609 -85240923 + AT_rich Low_complexity Low_complexity 1 41 0 1972 43 47 0 chr5 117844755 117845008 -85240524 - AluY SINE Alu -13 298 34 3444 190 102 62 chr5 117845861 117846008 -85239524 + L1MC3 LINE L1 6708 6848 -937 567 0 0 0 chr5 117846008 117846071 -85239461 + (CA)n Simple_repeat Simple_repeat 2 64 0 3444 190 102 62 chr5 117846071 117846296 -85239236 + L1MC3 LINE L1 6848 7063 -722 243 222 0 0 chr5 117846296 117846341 -85239191 + MLT1F1 LTR MaLR 45 89 -478 3444 190 102 62 chr5 117846341 117846947 -85238585 + L1MC3 LINE L1 7063 7772 -13 962 278 0 0 chr5 117847731 117847940 -85237592 + MER58A DNA MER1_type 16 224 0 22 0 0 0 chr5 117848505 117848527 -85237005 + AT_rich Low_complexity Low_complexity 1 22 0 349 278 68 36 chr5 117848547 117848892 -85236640 + L1ME1 LINE L1 2049 2376 -3839 261 0 0 0 chr5 117849229 117849258 -85236274 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1755 152 11 3 chr5 117849275 117849558 -85235974 - AluSx SINE Alu -27 285 1 24 0 0 0 chr5 117850071 117850095 -85235437 + AT_rich Low_complexity Low_complexity 1 24 0 354 125 78 0 chr5 117850674 117850738 -85234794 + MER41B LTR ERV1 567 635 0 2077 143 3 0 chr5 117851118 117851426 -85234106 + AluSx SINE Alu 3 311 -1 41 48 0 0 chr5 117851497 117851559 -85233973 + AT_rich Low_complexity Low_complexity 1 62 0 1782 264 73 40 chr5 117853378 117853501 -85232031 + L1ME1 LINE L1 2811 2928 -3287 297 51 0 0 chr5 117853501 117853540 -85231992 + (CA)n Simple_repeat Simple_repeat 2 40 0 1782 264 73 40 chr5 117853540 117854389 -85231143 + L1ME1 LINE L1 2928 3815 -2400 393 22 0 0 chr5 117854397 117854443 -85231089 + (TG)n Simple_repeat Simple_repeat 1 46 0 497 232 54 12 chr5 117854487 117854655 -85230877 + L1ME1 LINE L1 4959 5133 -1082 282 289 62 0 chr5 117854726 117854823 -85230709 + L1ME1 LINE L1 5228 5330 -885 2459 251 42 30 chr5 117854898 117855692 -85229840 + L1ME1 LINE L1 5362 6164 -71 781 276 47 24 chr5 117855768 117856149 -85229383 + L1M4 LINE L1 3181 3570 -2576 6101 74 18 30 chr5 117856821 117858435 -85227097 + L1PA10 LINE L1 4548 6152 -16 1221 184 115 0 chr5 117858460 117858704 -85226828 + AluJo SINE Alu 7 278 -34 191 200 0 20 chr5 117859303 117859353 -85226179 + CT-rich Low_complexity Low_complexity 2 50 0 2080 122 7 0 chr5 117859620 117859915 -85225617 + AluSx SINE Alu 1 297 -15 8812 202 50 25 chr5 117859983 117862039 -85223493 + L1MC3 LINE L1 5536 7643 -142 2099 87 44 0 chr5 117862243 117862541 -85222991 - AluY SINE Alu 0 311 1 206 250 0 50 chr5 117863308 117863368 -85222164 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 263 324 78 0 chr5 117864787 117864889 -85220643 + L2 LINE L2 2216 2325 -989 2509 55 3 0 chr5 117864959 117865267 -85220265 - AluY SINE Alu -2 309 1 1230 172 0 19 chr5 117865267 117865482 -85220050 + AluJo SINE Alu 102 312 0 218 286 8 40 chr5 117866413 117866539 -85218993 + T-rich Low_complexity Low_complexity 5 126 0 198 0 0 0 chr5 117866539 117866561 -85218971 + (TTA)n Simple_repeat Simple_repeat 3 24 0 41648 39 25 2 chr5 117866561 117872554 -85212978 - L1PA3 LINE L1 -18 6137 1 4151 139 40 51 chr5 117873245 117874144 -85211388 + L1MA9 LINE L1 5417 6305 -7 237 333 13 0 chr5 117876860 117876938 -85208594 - MIR3 SINE MIR -54 154 76 186 103 0 0 chr5 117877433 117877462 -85208070 + (TTA)n Simple_repeat Simple_repeat 3 31 0 288 212 0 0 chr5 117878045 117878111 -85207421 + GA-rich Low_complexity Low_complexity 3 68 0 21 57 0 0 chr5 117879397 117879432 -85206100 + AT_rich Low_complexity Low_complexity 1 35 0 987 220 62 13 chr5 117880115 117880420 -85205112 + MER33 DNA MER1_type 1 320 -4 8474 26 0 4 chr5 117881381 117883161 -85202371 + L1PA4 LINE L1 4379 6155 0 350 340 10 49 chr5 117884085 117884288 -85201244 + L2 LINE L2 3113 3307 -6 461 233 45 68 chr5 117884743 117885009 -85200523 + L1MC5 LINE L1 7313 7572 -389 22 0 0 0 chr5 117885036 117885058 -85200474 + AT_rich Low_complexity Low_complexity 1 22 0 33 66 0 0 chr5 117885667 117885728 -85199804 + AT_rich Low_complexity Low_complexity 1 61 0 1344 125 0 39 chr5 117886929 117887161 -85198371 - AluSg/x SINE Alu -7 305 83 748 269 23 8 chr5 117887164 117887424 -85198108 + L1M4 LINE L1 4013 4276 -1870 1967 123 3 3 chr5 117887442 117887766 -85197766 - AluSx SINE Alu 0 324 1 35 0 0 0 chr5 117889257 117889292 -85196240 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 117889448 117889479 -85196053 + AT_rich Low_complexity Low_complexity 1 31 0 724 275 147 65 chr5 117889514 117890128 -85195404 - L1ME3 LINE L1 -115 6047 5384 294 265 61 44 chr5 117890144 117890325 -85195207 - L1ME3 LINE L1 -804 5342 5159 231 257 50 84 chr5 117890615 117890817 -85194715 - MER97c DNA MER1_type? -81 1009 815 1829 196 150 9 chr5 117891111 117891570 -85193962 - MER97a DNA MER1_type? -359 535 12 192 343 43 0 chr5 117892141 117892211 -85193321 - L2 LINE L2 -2 3311 3239 7218 192 71 66 chr5 117895270 117896441 -85189091 - L1PA7 LINE L1 -599 5555 4392 4235 75 19 8 chr5 117896441 117897027 -85188505 + L1PA7 LINE L1 5556 6150 -4 7218 192 71 66 chr5 117897027 117898845 -85186687 - L1P3 LINE L1 -1762 4392 2550 509 152 54 18 chr5 117898836 117898948 -85186584 + L1P LINE L1 4432 4547 -1599 * 3735 175 31 3 chr5 117898948 117899650 -85185882 + L1MC1 LINE L1 5606 6328 -5 492 325 26 48 chr5 117900176 117900444 -85185088 + MIR SINE MIR 1 262 0 21 0 0 0 chr5 117900889 117900910 -85184622 + GC_rich Low_complexity Low_complexity 1 21 0 247 287 238 10 chr5 117902442 117902543 -85182989 - L2 LINE L2 -4 3268 3145 190 307 176 6 chr5 117902647 117902806 -85182726 - L2 LINE L2 -6 3307 3119 643 345 48 8 chr5 117902806 117903055 -85182477 + MIR SINE MIR 3 261 -1 32 26 0 0 chr5 117904699 117904738 -85180794 + AT_rich Low_complexity Low_complexity 1 39 0 233 246 136 9 chr5 117905280 117905390 -85180142 + L1ME4a LINE L1 5988 6111 -10 418 218 11 0 chr5 117906922 117907009 -85178523 + MER58B DNA MER1_type 254 341 0 2344 70 3 0 chr5 117907270 117907569 -85177963 - AluSp SINE Alu -13 300 1 1722 184 16 30 chr5 117907653 117908023 -85177509 - MLT1A1 LTR MaLR 0 365 1 319 339 88 19 chr5 117909420 117909680 -85175852 + L1M4 LINE L1 4335 4612 -1534 3442 221 81 29 chr5 117909782 117910807 -85174725 + L1MC3 LINE L1 6708 7785 0 1933 326 93 16 chr5 117910952 117912372 -85173160 - L2 LINE L2 -2 3311 1785 522 155 0 0 chr5 117912475 117912572 -85172960 + GA-rich Low_complexity Low_complexity 3 99 0 209 259 35 0 chr5 117912635 117912720 -85172812 + (TA)n Simple_repeat Simple_repeat 1 88 0 21 0 0 0 chr5 117912768 117912789 -85172743 + AT_rich Low_complexity Low_complexity 1 21 0 528 277 61 36 chr5 117914583 117914912 -85170620 - L1ME4a LINE L1 -229 5892 5556 207 200 0 0 chr5 117915065 117915110 -85170422 + (TA)n Simple_repeat Simple_repeat 2 46 0 213 154 0 0 chr5 117915808 117915847 -85169685 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 27 0 0 0 chr5 117917065 117917092 -85168440 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 117918113 117918135 -85167397 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 117919151 117919194 -85166338 + AT_rich Low_complexity Low_complexity 1 43 0 411 293 152 10 chr5 117919201 117919399 -85166133 - MIR SINE MIR -27 235 10 29 0 0 0 chr5 117919645 117919674 -85165858 + AT_rich Low_complexity Low_complexity 1 29 0 186 425 7 22 chr5 117919798 117919937 -85165595 + MIR3 SINE MIR 49 185 -23 23 33 0 0 chr5 117919984 117920014 -85165518 + AT_rich Low_complexity Low_complexity 1 30 0 252 259 153 0 chr5 117920388 117920473 -85165059 + MIR SINE MIR 31 128 -134 5652 132 6 0 chr5 117920539 117921804 -85163728 - L1PA16 LINE L1 -9 6157 4878 4795 98 6 0 chr5 117922336 117923030 -85162502 - L1P LINE L1 -801 5345 4648 6721 56 3 1 chr5 117923050 117923907 -85161625 + L1PA7 LINE L1 5296 6154 0 21 57 0 0 chr5 117925848 117925883 -85159649 + AT_rich Low_complexity Low_complexity 1 35 0 420 20 0 0 chr5 117926439 117926488 -85159044 + (TG)n Simple_repeat Simple_repeat 1 49 0 4623 31 0 0 chr5 117926602 117927154 -85158378 - L1P LINE L1 -1595 4551 4000 6995 24 0 0 chr5 117927154 117927973 -85157559 + L1PA3 LINE L1 5336 6155 0 455 234 9 27 chr5 117928202 117928313 -85157219 - MER58B DNA MER1_type 0 341 233 435 147 116 0 chr5 117928314 117928409 -85157123 + L1MA3 LINE L1 5713 5818 -487 3951 114 7 0 chr5 117928409 117928997 -85156535 + L1PB1 LINE L1 5556 6147 -4 2812 129 10 20 chr5 117929011 117929507 -85156025 + L1MA3 LINE L1 5815 6305 0 734 211 26 0 chr5 117929511 117929667 -85155865 - Tigger1 DNA MER2_type -2187 231 72 21 36 0 0 chr5 117930528 117930556 -85154976 + AT_rich Low_complexity Low_complexity 1 28 0 411 303 38 73 chr5 117930790 117931133 -85154399 - L1ME3A LINE L1 -289 5881 5551 13203 163 22 24 chr5 117931700 117931892 -85153640 + Tigger1 DNA MER2_type 1 192 -2226 225 0 0 0 chr5 117931892 117931917 -85153615 + (TTA)n Simple_repeat Simple_repeat 3 27 0 13203 163 22 24 chr5 117931917 117933558 -85151974 + Tigger1 DNA MER2_type 192 1835 -583 1410 34 0 6 chr5 117933558 117933733 -85151799 - L1PA5 LINE L1 -2 6152 5979 13203 163 22 24 chr5 117933733 117933993 -85151539 + Tigger1 DNA MER2_type 1835 2094 -324 1890 135 31 60 chr5 117933993 117934379 -85151153 + THE1C LTR MaLR 1 375 0 13203 163 22 24 chr5 117934379 117934705 -85150827 + Tigger1 DNA MER2_type 2094 2417 -1 908 177 19 0 chr5 117935972 117936130 -85149402 + Tigger5 DNA MER2_type 2163 2323 0 626 222 0 0 chr5 117936328 117936454 -85149078 - FLAM_A SINE Alu -6 136 11 306 0 0 0 chr5 117936771 117936805 -85148727 + (TC)n Simple_repeat Simple_repeat 2 35 0 * 369 0 0 0 chr5 117936804 117936845 -85148687 + (TA)n Simple_repeat Simple_repeat 2 42 0 2001 145 0 0 chr5 117936936 117937233 -85148299 + AluSx SINE Alu 6 302 -10 25 31 0 0 chr5 117937282 117937314 -85148218 + AT_rich Low_complexity Low_complexity 1 32 0 7695 24 0 0 chr5 117937398 117938912 -85146620 - L1PA2 LINE L1 -2 6153 4640 12451 33 0 0 chr5 117938912 117940411 -85145121 + L1PA2 LINE L1 3121 4619 -1527 2065 154 0 0 chr5 117940513 117940825 -85144707 + AluSx SINE Alu 1 312 0 21 89 0 0 chr5 117940890 117940946 -85144586 + AT_rich Low_complexity Low_complexity 1 56 0 456 19 0 0 chr5 117941152 117941205 -85144327 + (TA)n Simple_repeat Simple_repeat 1 53 0 226 226 32 16 chr5 117942247 117942309 -85143223 + GA-rich Low_complexity Low_complexity 2 64 0 1465 228 9 16 chr5 117942942 117943258 -85142274 - MER70A LTR ERVL -69 403 90 274 286 0 26 chr5 117943254 117943331 -85142201 - MER70A LTR ERVL -310 162 88 * 28 29 0 0 chr5 117943409 117943444 -85142088 + AT_rich Low_complexity Low_complexity 1 35 0 689 210 8 0 chr5 117943460 117943584 -85141948 + FLAM_A SINE Alu 2 126 -7 287 276 118 0 chr5 117944593 117944720 -85140812 - L1MEd LINE L1 -5938 181 40 311 288 65 75 chr5 117945070 117945362 -85140170 + L1M4 LINE L1 2849 3137 -3009 344 225 0 72 chr5 117945587 117945698 -85139834 - HAL1b LINE L1 -768 580 478 2141 93 0 17 chr5 117945860 117946160 -85139372 - AluY SINE Alu -16 295 1 1926 147 27 24 chr5 117946281 117946655 -85138877 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 117948499 117948521 -85137011 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr5 117948521 117948564 -85136968 + (CA)n Simple_repeat Simple_repeat 2 44 0 249 214 0 0 chr5 117948984 117949040 -85136492 + T-rich Low_complexity Low_complexity 1 56 0 210 71 0 0 chr5 117949042 117949070 -85136462 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 235 234 182 0 chr5 117949178 117949255 -85136277 + L2 LINE L2 3223 3313 0 222 62 0 0 chr5 117949835 117949867 -85135665 + (T)n Simple_repeat Simple_repeat 1 32 0 360 325 113 14 chr5 117949981 117950193 -85135339 - MIR SINE MIR -29 233 1 21 36 0 0 chr5 117950206 117950234 -85135298 + AT_rich Low_complexity Low_complexity 1 28 0 2400 271 81 64 chr5 117950234 117951406 -85134126 - HAL1 LINE L1 -10 2497 1291 1944 60 0 20 chr5 117951406 117951686 -85133846 - AluY SINE Alu 0 313 39 2400 271 81 64 chr5 117951686 117952017 -85133515 - HAL1 LINE L1 -1216 1291 967 502 244 52 30 chr5 117952037 117952172 -85133360 + MER63A DNA MER1_type 73 210 0 542 277 151 15 chr5 117952221 117952427 -85133105 - HAL1 LINE L1 -1637 870 637 1810 145 7 3 chr5 117952669 117952979 -85132553 + AluSx SINE Alu 1 311 0 2555 56 0 0 chr5 117954171 117954477 -85131055 + AluY SINE Alu 1 306 -5 2157 116 0 3 chr5 117954791 117955094 -85130438 + AluSq SINE Alu 1 302 -11 26 30 0 0 chr5 117955971 117956004 -85129528 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr5 117956580 117956625 -85128907 + AT_rich Low_complexity Low_complexity 1 45 0 234 294 289 0 chr5 117956824 117957018 -85128514 - MIR SINE MIR -8 254 5 253 269 0 14 chr5 117957112 117957253 -85128279 + (TA)n Simple_repeat Simple_repeat 1 139 0 42071 38 22 1 chr5 117957492 117963514 -85122018 - L1PA2 LINE L1 -3 6152 1 237 298 25 0 chr5 117963516 117963637 -85121895 + (TA)n Simple_repeat Simple_repeat 2 125 0 189 107 0 0 chr5 117963817 117963845 -85121687 + (A)n Simple_repeat Simple_repeat 1 28 0 24 32 0 0 chr5 117966438 117966469 -85119063 + AT_rich Low_complexity Low_complexity 1 31 0 289 382 32 0 chr5 117966656 117966779 -85118753 - MIR3 SINE MIR -48 160 34 493 309 83 0 chr5 117967206 117967410 -85118122 + MLT1K LTR MaLR 339 559 -29 222 261 127 97 chr5 117968346 117968511 -85117021 - L2 LINE L2 -43 3270 3101 616 314 103 59 chr5 117970770 117971548 -85113984 + L2 LINE L2 1832 2643 -671 280 153 169 0 chr5 117971561 117971620 -85113912 + MER116 DNA Mariner 8 76 -4 3359 73 2 0 chr5 117972711 117973162 -85112370 - L1P LINE L1 -1401 4745 4294 3459 94 4 0 chr5 117973162 117973650 -85111882 + L1PA6 LINE L1 5660 6150 -4 17112 201 30 11 chr5 117973653 117979944 -85105588 + L1P4 LINE L1 2 6424 -395 555 68 2 10 chr5 117979936 117980021 -85105511 - L1PA2 LINE L1 -178 5990 5909 * 281 29 0 0 chr5 117980014 117980087 -85105445 + L1PA2 LINE L1 6108 6180 0 * 568 286 58 68 chr5 117980102 117980736 -85104796 + L1MEc LINE L1 1032 1659 -4737 226 274 101 46 chr5 117981142 117981449 -85104083 + L1ME LINE L1 1391 1714 -5217 705 331 102 43 chr5 117981516 117982467 -85103065 + L1MEc LINE L1 125 1131 -5265 447 262 104 27 chr5 117982470 117982653 -85102879 + Zaphod DNA AcHobo 397 593 -3438 952 234 89 3 chr5 117982730 117983101 -85102431 + Zaphod DNA AcHobo 3338 3740 -291 1410 277 25 25 chr5 117983120 117983637 -85101895 + LTR40a LTR ERVL 3 519 0 187 233 20 130 chr5 117983752 117983898 -85101634 + L2 LINE L2 3108 3237 -76 36 0 0 0 chr5 117984779 117984815 -85100717 + AT_rich Low_complexity Low_complexity 1 36 0 6463 77 0 0 chr5 117985964 117987088 -85098444 - L1PA6 LINE L1 -2 6152 5023 4707 136 17 0 chr5 117987710 117988468 -85097064 + L1PA13 LINE L1 5385 6155 -8 1692 237 84 25 chr5 117988707 117989197 -85096335 + LTR40a LTR ERVL 1 519 0 856 266 42 73 chr5 117989201 117989243 -85096289 - MLT1F LTR MaLR 0 542 500 2480 60 0 0 chr5 117989243 117989544 -85095988 - AluY SINE Alu -6 305 5 856 266 42 73 chr5 117989544 117989858 -85095674 - MLT1F LTR MaLR -42 500 197 245 276 31 51 chr5 117989900 117989998 -85095534 - MLT1F LTR MaLR -444 98 3 1522 199 7 10 chr5 117991514 117991815 -85093717 - AluJb SINE Alu -12 300 1 438 326 154 23 chr5 117992044 117992517 -85093015 + L1ME LINE L1 80 614 -5809 894 281 98 62 chr5 117992607 117993320 -85092212 + L1ME LINE L1 794 1532 -4891 1099 293 58 34 chr5 117993356 117993686 -85091846 + L1ME LINE L1 1800 2121 -5001 423 0 0 0 chr5 117993686 117993733 -85091799 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 1099 293 58 34 chr5 117993733 117994113 -85091419 + L1ME LINE L1 2121 2527 -4595 201 178 0 0 chr5 117994266 117994311 -85091221 + (ATG)n Simple_repeat Simple_repeat 2 46 0 402 313 49 6 chr5 117994314 117994477 -85091055 - MIR SINE MIR -30 232 63 207 226 0 32 chr5 117995207 117995269 -85090263 + A-rich Low_complexity Low_complexity 5 64 0 476 296 67 49 chr5 117995396 117995619 -85089913 + MLT1I LTR MaLR 125 351 -58 25 75 0 0 chr5 117996595 117996648 -85088884 + AT_rich Low_complexity Low_complexity 1 53 0 253 311 126 7 chr5 117997669 117997804 -85087728 - L2 LINE L2 0 3313 3163 3002 280 98 39 chr5 117998375 117999284 -85086248 - L1MCc LINE L1 -4918 1505 482 1681 136 75 0 chr5 117999284 117999563 -85085969 + AluSx SINE Alu 6 305 -7 3002 280 98 39 chr5 117999563 118000059 -85085473 - L1MCc LINE L1 -5941 482 17 23 33 0 0 chr5 118000060 118000090 -85085442 + AT_rich Low_complexity Low_complexity 1 30 0 330 348 87 14 chr5 118000510 118000648 -85084884 + MER5A DNA MER1_type 18 165 -24 23 0 0 0 chr5 118001014 118001037 -85084495 + AT_rich Low_complexity Low_complexity 1 23 0 287 312 69 37 chr5 118001465 118001683 -85083849 + MLT1K LTR MaLR 357 581 -7 21 0 0 0 chr5 118001708 118001729 -85083803 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr5 118002038 118002110 -85083422 + AT_rich Low_complexity Low_complexity 1 72 0 26 64 0 0 chr5 118002161 118002208 -85083324 + AT_rich Low_complexity Low_complexity 1 47 0 1890 248 58 36 chr5 118003115 118003756 -85081776 - MLT1E3 LTR MaLR 0 624 1 856 232 102 71 chr5 118004009 118004363 -85081169 - MLT1A1 LTR MaLR 0 365 1 3092 155 25 6 chr5 118005083 118005600 -85079932 - MER1A DNA MER1_type 0 527 1 214 162 0 0 chr5 118006118 118006155 -85079377 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 282 29 0 0 chr5 118006819 118006854 -85078678 + (CA)n Simple_repeat Simple_repeat 2 36 0 1403 214 81 37 chr5 118006906 118007313 -85078219 - LTR56 LTR ERV1 -20 425 1 24 32 0 0 chr5 118007380 118007411 -85078121 + AT_rich Low_complexity Low_complexity 1 31 0 281 39 29 0 chr5 118008452 118008504 -85077028 + L1PA6 LINE L1 6101 6154 0 21 0 0 0 chr5 118008891 118008912 -85076620 + AT_rich Low_complexity Low_complexity 1 21 0 263 348 119 0 chr5 118009326 118009444 -85076088 + L3b LINE CR1 1319 1450 -133 372 22 0 0 chr5 118009785 118009830 -85075702 + (CA)n Simple_repeat Simple_repeat 1 45 0 784 274 106 99 chr5 118011250 118012120 -85073412 - L2 LINE L2 0 3313 2431 303 218 50 50 chr5 118012233 118012334 -85073198 - HAL1 LINE L1 -1469 1038 938 31 0 0 0 chr5 118013421 118013452 -85072080 + AT_rich Low_complexity Low_complexity 1 31 0 409 282 221 0 chr5 118013901 118014114 -85071418 - L1MC/D LINE L1 -2094 5714 5455 41859 36 1 3 chr5 118014403 118020290 -85065242 - L1PA4 LINE L1 0 6155 280 204 53 0 53 chr5 118020335 118020373 -85065159 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 247 319 32 83 chr5 118020835 118020992 -85064540 + L2 LINE L2 3124 3272 0 21 71 0 0 chr5 118021037 118021079 -85064453 + AT_rich Low_complexity Low_complexity 1 42 0 954 111 15 0 chr5 118021198 118021333 -85064199 - AluY SINE Alu -18 293 157 1175 325 96 12 chr5 118021464 118021956 -85063576 + L3 LINE CR1 184 716 -861 344 351 99 47 chr5 118022005 118022449 -85063083 + L3 LINE CR1 962 1428 -149 13845 176 33 4 chr5 118022492 118024944 -85060588 + L1M1 LINE L1 17 2540 -5025 238 306 111 32 chr5 118025377 118025838 -85059694 - L1M4 LINE L1 -1768 4378 3882 23 0 0 0 chr5 118026270 118026293 -85059239 + AT_rich Low_complexity Low_complexity 1 23 0 684 180 0 43 chr5 118026954 118027093 -85058439 - FLAM_C SINE Alu 0 133 1 22 56 0 0 chr5 118027167 118027203 -85058329 + AT_rich Low_complexity Low_complexity 1 36 0 859 290 89 14 chr5 118028078 118028437 -85057095 + MLT1J2 LTR MaLR 41 426 -24 363 281 132 0 chr5 118029203 118029317 -85056215 - L2 LINE L2 0 3313 3185 258 330 119 39 chr5 118029794 118030154 -85055378 + L2 LINE L2 2603 2992 -321 29 47 0 0 chr5 118030178 118030221 -85055311 + AT_rich Low_complexity Low_complexity 1 43 0 438 276 122 40 chr5 118030812 118031242 -85054290 - L1ME LINE L1 -400 5721 5258 236 315 54 39 chr5 118031383 118031513 -85054019 + L2 LINE L2 3180 3311 -2 24 32 0 0 chr5 118031986 118032017 -85053515 + AT_rich Low_complexity Low_complexity 1 31 0 508 216 27 0 chr5 118032455 118032566 -85052966 - MER45A DNA AcHobo -14 164 51 47 33 0 0 chr5 118032840 118032901 -85052631 + AT_rich Low_complexity Low_complexity 1 61 0 409 330 109 47 chr5 118033745 118034445 -85051087 - L2 LINE L2 -9 3263 2521 538 290 63 71 chr5 118034599 118034995 -85050537 - MLT1I LTR MaLR -8 401 9 7450 43 1 0 chr5 118035232 118036874 -85048658 - L1PA5 LINE L1 -1 6153 4510 230 300 39 39 chr5 118036874 118037004 -85048528 - MIR3 SINE MIR -29 179 50 27 29 0 0 chr5 118037541 118037575 -85047957 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 118037742 118037765 -85047767 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 118037977 118038007 -85047525 + AT_rich Low_complexity Low_complexity 1 30 0 2337 190 76 12 chr5 118038207 118038696 -85046836 - MLT2B1 LTR ERVL 0 520 1 23 33 0 0 chr5 118039652 118039682 -85045850 + AT_rich Low_complexity Low_complexity 1 30 0 1497 282 62 25 chr5 118039715 118040244 -85045288 - MLT1H1 LTR MaLR 0 555 7 1049 372 28 74 chr5 118040255 118040690 -85044842 + MER47B DNA MER2_type 4 418 0 182 196 22 22 chr5 118040911 118040957 -85044575 - L2 LINE L2 -2 3270 3225 314 308 130 14 chr5 118041158 118041304 -85044228 - MIR SINE MIR -69 193 31 298 242 96 45 chr5 118041576 118041733 -85043799 - MER63 DNA MER1_type 0 1060 672 25 51 0 0 chr5 118042393 118042432 -85043100 + AT_rich Low_complexity Low_complexity 1 39 0 1579 71 10 0 chr5 118042480 118042727 -85042805 + AluY SINE Alu 85 333 0 1054 214 4 46 chr5 118043764 118044002 -85041530 - AluJb SINE Alu 0 312 85 341 291 135 65 chr5 118044044 118044741 -85040791 - L1M4 LINE L1 -2290 3856 3111 313 0 0 0 chr5 118044789 118044829 -85040703 - L1PA3 LINE L1 -3 6152 6113 2089 106 33 0 chr5 118044833 118045135 -85040397 - AluSq SINE Alu -1 312 1 22 56 0 0 chr5 118045636 118045672 -85039860 + AT_rich Low_complexity Low_complexity 1 36 0 353 327 82 10 chr5 118045673 118045881 -85039651 - HAL1b LINE L1 -878 470 248 602 247 99 6 chr5 118045891 118046053 -85039479 + MIR SINE MIR 63 239 -23 1451 163 98 0 chr5 118046184 118046448 -85039084 - AluJo SINE Alu -1 311 22 740 254 161 28 chr5 118046554 118046909 -85038623 - L1ME1 LINE L1 -48 6118 5724 622 298 198 17 chr5 118047237 118047697 -85037835 - L2 LINE L2 0 3313 2751 2120 173 22 34 chr5 118048354 118048380 -85037152 + MLT2D LTR ERVL 1 26 -388 2975 137 86 70 chr5 118048380 118049022 -85036510 - MER39B LTR ERV1 -1 652 1 2120 173 22 34 chr5 118049022 118049411 -85036121 + MLT2D LTR ERVL 26 411 -3 1764 173 133 50 chr5 118049875 118050373 -85035159 + LTR49 LTR ERV1 1 539 -56 515 128 0 26 chr5 118051194 118051272 -85034260 - MER1B DNA MER1_type -2 337 262 * 1461 128 46 18 chr5 118051270 118051489 -85034043 - MER1B DNA MER1_type -72 225 1 184 294 0 20 chr5 118052072 118052123 -85033409 + MER5B DNA MER1_type 1 50 -128 25 0 0 0 chr5 118053081 118053106 -85032426 + AT_rich Low_complexity Low_complexity 1 25 0 1384 241 27 27 chr5 118054169 118054543 -85030989 + MLT1A2 LTR MaLR 1 374 0 257 301 58 29 chr5 118055391 118055494 -85030038 - L2 LINE L2 -3 3310 3205 1675 193 0 10 chr5 118055569 118055859 -85029673 + AluJo SINE Alu 1 287 -25 3299 58 45 5 chr5 118056069 118056496 -85029036 + MLT2A1 LTR ERVL 1 444 0 42812 74 16 6 chr5 118056496 118061935 -85023597 + HERVL-A1 LTR ERVL 1 5502 -152 2054 81 0 0 chr5 118061935 118062194 -85023338 + AluY SINE Alu 40 298 -13 42812 74 16 6 chr5 118062194 118062349 -85023183 + HERVL-A1 LTR ERVL 5502 5654 0 2910 71 20 15 chr5 118062349 118062742 -85022790 + MLT2A1 LTR ERVL 1 395 -49 275 250 23 0 chr5 118062774 118062862 -85022670 - L1MC4 LINE L1 -1339 6703 6614 485 203 0 0 chr5 118062867 118062946 -85022586 + THE1B LTR MaLR 204 282 -82 * 1414 216 24 17 chr5 118062945 118063237 -85022295 + MLT1F1 LTR MaLR 217 510 -57 263 90 90 0 chr5 118063247 118063325 -85022207 + (TA)n Simple_repeat Simple_repeat 1 85 0 317 96 39 0 chr5 118063325 118063377 -85022155 + MLT2A1 LTR ERVL 391 444 0 21 57 0 0 chr5 118065881 118065916 -85019616 + AT_rich Low_complexity Low_complexity 1 35 0 199 197 273 0 chr5 118066915 118066981 -85018551 - MIR SINE MIR -15 247 164 221 291 0 0 chr5 118067080 118067135 -85018397 - MIR SINE MIR -91 171 117 523 318 115 10 chr5 118067421 118067613 -85017919 + L2 LINE L2 2698 2909 -405 256 130 72 43 chr5 118067650 118067719 -85017813 + MADE1 DNA Mariner 1 71 -9 365 304 129 39 chr5 118067719 118068005 -85017527 + L2 LINE L2 2988 3299 -14 597 180 55 47 chr5 118068301 118068429 -85017103 - L2 LINE L2 -3 3310 3182 43356 43 2 9 chr5 118070297 118076558 -85008974 + L1PA3 LINE L1 1 6215 0 1903 168 7 3 chr5 118076804 118077113 -85008419 + AluJb SINE Alu 3 312 0 650 0 0 43 chr5 118077897 118077991 -85007541 + (TA)n Simple_repeat Simple_repeat 2 91 0 307 229 0 62 chr5 118078975 118079071 -85006461 - L1MC4 LINE L1 -1339 6703 6614 301 171 26 53 chr5 118079027 118079103 -85006429 + L1MCa LINE L1 1995 2068 -4358 * 322 280 0 32 chr5 118079096 118079189 -85006343 - L1MC4 LINE L1 -1339 6703 6614 * 329 307 0 0 chr5 118079113 118079201 -85006331 + L1MC4 LINE L1 6616 6703 -1339 258 311 0 0 chr5 118079207 118079297 -85006235 - L1MC4 LINE L1 -1339 6703 6614 226 198 81 35 chr5 118079343 118079429 -85006103 + L1MC4 LINE L1 6614 6703 -1339 2088 232 49 40 chr5 118079960 118080462 -85005070 + MLT2B3 LTR ERVL 1 510 -44 234 0 0 0 chr5 118080462 118080488 -85005044 + (TC)n Simple_repeat Simple_repeat 1 26 0 2088 232 49 40 chr5 118080488 118080532 -85005000 + MLT2B3 LTR ERVL 510 552 -2 7431 33 3 0 chr5 118082243 118083643 -85001889 + L1PA4 LINE L1 4753 6155 0 497 304 20 0 chr5 118083883 118084031 -85001501 - MIR SINE MIR 0 262 112 1993 133 3 10 chr5 118084212 118084505 -85001027 - AluSx SINE Alu -20 292 2 261 0 0 0 chr5 118084506 118084535 -85000997 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2182 115 3 3 chr5 118086981 118087293 -84998239 + AluSq SINE Alu 1 312 -1 408 300 105 50 chr5 118087733 118088056 -84997476 + L1M4 LINE L1 4162 4502 -1644 266 260 94 0 chr5 118088084 118088180 -84997352 + L1M4 LINE L1 4556 4660 -1486 708 287 38 16 chr5 118088458 118088824 -84996708 - L1MEc LINE L1 -3488 3453 3080 1530 207 0 10 chr5 118089292 118089601 -84995931 - AluSx SINE Alu -6 306 1 3542 204 61 18 chr5 118089732 118090614 -84994918 - L1MC3 LINE L1 -9 7776 6857 201 24 98 0 chr5 118090633 118090674 -84994858 + T-rich Low_complexity Low_complexity 1 45 0 402 268 102 20 chr5 118090710 118090985 -84994547 - L1MCa LINE L1 -5784 338 46 946 267 142 57 chr5 118091029 118092286 -84993246 - L1MEc LINE L1 -4064 3058 1695 302 269 122 39 chr5 118092398 118092554 -84992978 - L1MEc LINE L1 -5132 1291 1123 183 227 0 0 chr5 118093005 118093049 -84992483 - MIR SINE MIR -66 142 99 219 359 68 17 chr5 118093684 118093801 -84991731 + L2 LINE L2 3125 3247 -25 675 289 129 39 chr5 118093834 118094098 -84991434 - L2 LINE L2 0 3313 3074 2145 125 0 0 chr5 118094098 118094394 -84991138 + AluSx SINE Alu 1 296 -16 675 289 129 39 chr5 118094394 118094688 -84990844 - L2 LINE L2 -239 3074 2697 859 271 5 23 chr5 118095097 118095318 -84990214 - MER58A DNA MER1_type -7 217 1 21 71 0 0 chr5 118095802 118095844 -84989688 + AT_rich Low_complexity Low_complexity 1 42 0 224 89 89 0 chr5 118095844 118095923 -84989609 + (TA)n Simple_repeat Simple_repeat 2 87 0 192 158 0 0 chr5 118097106 118097144 -84988388 + (CA)n Simple_repeat Simple_repeat 1 38 0 2082 140 0 0 chr5 118098095 118098402 -84987130 + AluSx SINE Alu 6 312 0 1988 99 28 124 chr5 118098507 118098902 -84986630 + LTR18A LTR ERVL 1 357 0 2041 168 8 4 chr5 118098926 118099454 -84986078 + HERVL18 LTR ERVL 95 694 -5353 * 5693 161 21 4 chr5 118099452 118100389 -84985143 + HERVL18 LTR ERVL 858 1810 -4237 1158 107 107 5 chr5 118100388 118100584 -84984948 + HERVL18 LTR ERVL 2119 2334 -3713 * 5985 184 4 0 chr5 118100600 118101589 -84983943 + HERVL18 LTR ERVL 5055 6047 0 2076 102 15 127 chr5 118101590 118101992 -84983540 + LTR18A LTR ERVL 1 357 0 252 0 0 0 chr5 118103364 118103392 -84982140 + (TA)n Simple_repeat Simple_repeat 1 28 0 647 208 18 48 chr5 118103888 118104056 -84981476 + FRAM SINE Alu 3 165 -1 23 0 0 0 chr5 118106031 118106054 -84979478 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 118106540 118106562 -84978970 + AT_rich Low_complexity Low_complexity 1 22 0 205 156 22 22 chr5 118106739 118106784 -84978748 + (TA)n Simple_repeat Simple_repeat 2 46 0 392 302 130 0 chr5 118106871 118107015 -84978517 + MIR SINE MIR 37 196 -36 2458 80 0 6 chr5 118108170 118108484 -84977048 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 118108862 118108890 -84976642 + AT_rich Low_complexity Low_complexity 1 28 0 211 303 123 33 chr5 118109361 118109483 -84976049 - MIR3 SINE MIR -5 203 71 318 50 0 0 chr5 118110575 118110615 -84974917 + (CA)n Simple_repeat Simple_repeat 2 41 0 25 0 0 0 chr5 118110735 118110760 -84974772 + AT_rich Low_complexity Low_complexity 1 25 0 318 26 0 0 chr5 118111812 118111851 -84973681 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr5 118114390 118114415 -84971117 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 214 305 17 17 chr5 118114916 118114975 -84970557 - MIR SINE MIR -203 59 1 2383 60 0 0 chr5 118115331 118115614 -84969918 - AluY SINE Alu -28 283 1 22 0 0 0 chr5 118115623 118115645 -84969887 + AT_rich Low_complexity Low_complexity 1 22 0 279 0 0 0 chr5 118117016 118117047 -84968485 + (CA)n Simple_repeat Simple_repeat 1 31 0 2210 152 17 24 chr5 118118293 118118708 -84966824 + MER61B LTR ERV1 1 412 -13 391 210 20 20 chr5 118119463 118119563 -84965969 + MIR3 SINE MIR 83 182 -26 2651 137 100 2 chr5 118120130 118120589 -84964943 - MER61D LTR ERV1 -1 500 1 442 299 25 19 chr5 118121580 118121737 -84963795 - MIR SINE MIR -94 168 11 191 355 0 16 chr5 118124302 118124364 -84961168 - MER5B DNA MER1_type -72 106 46 354 264 52 32 chr5 118124497 118124652 -84960880 + MIR SINE MIR 95 252 -10 30 83 0 0 chr5 118124775 118124847 -84960685 + AT_rich Low_complexity Low_complexity 1 72 0 249 332 32 32 chr5 118126692 118126942 -84958590 + L1MC/D LINE L1 4349 4598 -1548 870 86 0 26 chr5 118127308 118127425 -84958107 + AluSq/x SINE Alu 1 114 -198 332 105 35 0 chr5 118127429 118127486 -84958046 + GA-rich Low_complexity Low_complexity 2 60 0 461 286 54 25 chr5 118127487 118127728 -84957804 + L1MC/D LINE L1 5290 5537 -2271 437 330 85 48 chr5 118127844 118128256 -84957276 + HAL1b LINE L1 370 796 -552 2045 131 3 6 chr5 118128683 118128996 -84956536 - AluSx SINE Alu 0 312 1 555 187 0 0 chr5 118129070 118129177 -84956355 - FLAM_C SINE Alu 0 143 37 2591 43 0 0 chr5 118129451 118129752 -84955780 + AluY SINE Alu 1 301 -10 246 105 0 0 chr5 118129752 118129790 -84955742 + (TA)n Simple_repeat Simple_repeat 2 39 0 897 307 107 9 chr5 118131774 118132194 -84953338 - LTR16B LTR ERVL 0 464 4 18293 114 2 2 chr5 118132786 118135569 -84949963 - L1PA7 LINE L1 -2186 3960 1178 10225 85 3 0 chr5 118135581 118137771 -84947761 + L1PA7 LINE L1 3957 6153 -1 500 272 132 61 chr5 118139411 118139662 -84945870 + L1MC4a LINE L1 685 966 -5239 2054 126 19 10 chr5 118139662 118139971 -84945561 + AluSx SINE Alu 1 312 0 500 272 132 61 chr5 118139971 118140046 -84945486 + L1MC4a LINE L1 966 1034 -5171 604 184 0 16 chr5 118140060 118140185 -84945347 + AluJb SINE Alu 189 311 -1 369 0 0 0 chr5 118140403 118140444 -84945088 + (TA)n Simple_repeat Simple_repeat 1 41 0 611 324 68 11 chr5 118140448 118141081 -84944451 + L1MC4a LINE L1 1918 2552 -3663 369 287 6 19 chr5 118141104 118141261 -84944271 + L1MC4a LINE L1 2629 2783 -3432 21 57 0 0 chr5 118141562 118141597 -84943935 + AT_rich Low_complexity Low_complexity 1 35 0 777 304 65 49 chr5 118143466 118143835 -84941697 - MLT1H LTR MaLR -152 397 23 1114 179 5 18 chr5 118143998 118144216 -84941316 + Tigger2 DNA MER2_type 1 215 -2503 1987 191 51 14 chr5 118144217 118144631 -84940901 + Tigger2a DNA MER2_type 5 433 -1 289 347 53 61 chr5 118144636 118145014 -84940518 + L2 LINE L2 2152 2526 -788 389 273 96 81 chr5 118145793 118145990 -84939542 - LTR16A1 LTR ERVL -1 456 252 7236 31 0 0 chr5 118145990 118147103 -84938429 - L1PA4 LINE L1 0 6155 5030 389 273 96 81 chr5 118147103 118147176 -84938356 - LTR16A1 LTR ERVL -205 252 182 763 271 54 8 chr5 118147561 118147801 -84937731 + MIR SINE MIR 2 252 -10 411 268 24 8 chr5 118148271 118148398 -84937134 + LTR67 LTR ERVL 418 546 -11 288 77 0 0 chr5 118148486 118148525 -84937007 + (T)n Simple_repeat Simple_repeat 1 39 0 484 332 101 5 chr5 118148793 118149010 -84936522 + MIR SINE MIR 25 262 0 27 73 0 0 chr5 118150096 118150151 -84935381 + AT_rich Low_complexity Low_complexity 1 55 0 218 281 53 0 chr5 118150474 118150531 -84935001 + MIR SINE MIR 48 107 -155 306 383 29 0 chr5 118150837 118151012 -84934520 + L1MC4a LINE L1 4081 4260 -1955 384 316 99 39 chr5 118151235 118151962 -84933570 + L1MC4a LINE L1 4416 5186 -1029 637 331 60 42 chr5 118152120 118152670 -84932862 + L1MC4a LINE L1 5345 5727 -642 270 0 0 0 chr5 118152759 118152789 -84932743 + (TG)n Simple_repeat Simple_repeat 1 30 0 23 54 0 0 chr5 118152844 118152881 -84932651 + AT_rich Low_complexity Low_complexity 1 37 0 242 222 11 33 chr5 118153245 118153335 -84932197 + (TA)n Simple_repeat Simple_repeat 1 88 0 345 313 84 24 chr5 118153467 118153633 -84931899 + MER5B DNA MER1_type 1 176 -2 1817 181 71 81 chr5 118154614 118155121 -84930411 + MLT1D LTR MaLR 4 505 0 1686 110 4 4 chr5 118155281 118155526 -84930006 + AluSg/x SINE Alu 68 312 0 21 36 0 0 chr5 118155802 118155830 -84929702 + AT_rich Low_complexity Low_complexity 1 28 0 380 336 7 27 chr5 118155884 118156030 -84929502 - MIR SINE MIR -112 150 8 1510 236 24 87 chr5 118156128 118156264 -84929268 + MLT1F LTR MaLR 2 145 -397 1978 107 62 3 chr5 118156264 118156553 -84928979 - AluSx SINE Alu -6 306 1 1510 236 24 87 chr5 118156553 118156991 -84928541 + MLT1F LTR MaLR 145 540 -2 29 78 0 0 chr5 118159727 118159791 -84925741 + AT_rich Low_complexity Low_complexity 1 64 0 2311 258 43 16 chr5 118161620 118162207 -84923325 + L1M4 LINE L1 4339 4953 -1193 243 0 0 0 chr5 118162207 118162234 -84923298 + (CA)n Simple_repeat Simple_repeat 2 28 0 2311 258 43 16 chr5 118162234 118162417 -84923115 + L1M4 LINE L1 4953 5130 -1016 * 7088 125 28 3 chr5 118162413 118163291 -84922241 + L1MC1 LINE L1 4114 4968 -1365 7087 48 15 0 chr5 118163291 118164389 -84921143 + L1PA5 LINE L1 5042 6151 -3 7088 125 28 3 chr5 118164389 118165566 -84919966 + L1MC1 LINE L1 4968 6327 -6 942 274 12 87 chr5 118165814 118166295 -84919237 - LTR67 LTR ERVL -3 554 110 30 0 0 0 chr5 118168153 118168183 -84917349 + AT_rich Low_complexity Low_complexity 1 30 0 215 321 62 62 chr5 118168370 118168482 -84917050 - MIR3 SINE MIR -4 204 93 30 45 0 0 chr5 118168772 118168816 -84916716 + AT_rich Low_complexity Low_complexity 1 44 0 22 94 0 0 chr5 118169278 118169342 -84916190 + AT_rich Low_complexity Low_complexity 1 64 0 656 281 40 32 chr5 118170126 118170375 -84915157 + MIR SINE MIR 6 256 -6 318 261 189 26 chr5 118171987 118172140 -84913392 - MIR3 SINE MIR -22 186 9 27 62 0 0 chr5 118172249 118172297 -84913235 + AT_rich Low_complexity Low_complexity 1 48 0 3185 73 13 35 chr5 118172532 118172986 -84912546 + MLT2A1 LTR ERVL 1 444 0 837 258 106 61 chr5 118174760 118175205 -84910327 + MLT1C LTR MaLR 1 465 -2 470 337 124 0 chr5 118176469 118176662 -84908870 + MIR SINE MIR 32 248 -14 2364 105 0 0 chr5 118178228 118178541 -84906991 - AluSq SINE Alu 0 313 1 256 258 0 0 chr5 118178902 118178964 -84906568 + CT-rich Low_complexity Low_complexity 3 64 0 303 49 0 0 chr5 118179772 118179813 -84905719 + (TG)n Simple_repeat Simple_repeat 2 42 0 264 396 22 41 chr5 118180930 118181248 -84904284 + L3 LINE CR1 211 522 -1055 516 219 17 25 chr5 118182324 118182443 -84903089 - L2 LINE L2 -18 3295 3178 588 294 11 93 chr5 118182475 118182744 -84902788 - L2 LINE L2 -578 2736 2490 650 356 57 25 chr5 118182859 118183261 -84902271 + L3 LINE CR1 1061 1475 -102 4278 229 56 67 chr5 118184483 118184572 -84900960 - L1MD2 LINE L1 -16 6343 6255 1979 153 7 0 chr5 118184572 118184879 -84900653 - AluSx SINE Alu 0 312 4 4278 229 56 67 chr5 118184879 118186885 -84898647 - L1MD2 LINE L1 -104 6255 4229 1991 130 3 0 chr5 118186885 118187170 -84898362 + AluSq SINE Alu 1 286 -27 4278 229 56 67 chr5 118187170 118187403 -84898129 - L1MD2 LINE L1 -2130 4229 4047 2385 72 0 0 chr5 118187403 118187707 -84897825 - AluY SINE Alu -7 304 1 4278 229 56 67 chr5 118187707 118187769 -84897763 - L1MD2 LINE L1 -2312 4047 3986 207 211 0 0 chr5 118188847 118188885 -84896647 - L2 LINE L2 -2 3311 3274 900 224 91 8 chr5 118189808 118190072 -84895460 + L1ME1 LINE L1 5877 6162 -4 6220 148 18 21 chr5 118190549 118192200 -84893332 - L1MA3 LINE L1 0 7724 6079 1952 147 18 65 chr5 118192207 118192601 -84892931 - L1MA3 LINE L1 -3558 4007 3643 2351 85 0 25 chr5 118192601 118192918 -84892614 - AluSc SINE Alu 0 309 1 1952 147 18 65 chr5 118192918 118193246 -84892286 - L1MA3 LINE L1 -3922 3643 3301 363 339 75 35 chr5 118243752 118243926 -84841606 + MIR3 SINE MIR 22 202 -6 399 277 52 58 chr5 118244023 118244178 -84841354 - MIR SINE MIR -22 240 87 730 308 66 76 chr5 118246757 118247257 -84838275 - L2 LINE L2 0 3313 2819 26 0 0 0 chr5 118247959 118247985 -84837547 + AT_rich Low_complexity Low_complexity 1 26 0 229 283 152 28 chr5 118248051 118248485 -84837047 - L1ME4a LINE L1 -3 6118 5631 1743 170 102 58 chr5 118248933 118249617 -84835915 - LTR1B LTR ERV1 0 785 1 21 36 0 0 chr5 118249729 118249757 -84835775 + AT_rich Low_complexity Low_complexity 1 28 0 378 354 83 36 chr5 118249944 118250497 -84835035 - L1ME4a LINE L1 -1573 4573 3995 426 301 75 0 chr5 118250548 118250694 -84834838 - MIR SINE MIR 0 262 106 256 318 111 24 chr5 118250738 118251027 -84834505 - L1ME4a LINE L1 -2235 3911 3598 23 33 0 0 chr5 118251630 118251660 -84833872 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 118251686 118251708 -84833824 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr5 118252178 118252210 -84833322 + AT_rich Low_complexity Low_complexity 1 32 0 2286 116 0 0 chr5 118252266 118252568 -84832964 - AluSx SINE Alu -10 302 1 824 325 20 0 chr5 118252624 118252876 -84832656 - MIR SINE MIR 0 262 6 25 31 0 0 chr5 118254484 118254516 -84831016 + AT_rich Low_complexity Low_complexity 1 32 0 207 176 0 0 chr5 118254627 118254661 -84830871 + (TG)n Simple_repeat Simple_repeat 1 34 0 12859 145 65 15 chr5 118255137 118257247 -84828285 + Tigger1 DNA MER2_type 2 2238 -180 2181 121 3 0 chr5 118257247 118257552 -84827980 - AluSq SINE Alu -7 306 1 12859 145 65 15 chr5 118257552 118257743 -84827789 + Tigger1 DNA MER2_type 2238 2418 0 200 35 35 0 chr5 118258086 118258115 -84827417 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 340 226 0 0 chr5 118258395 118258457 -84827075 - L2 LINE L2 0 3313 3252 31 26 0 0 chr5 118259641 118259679 -84825853 + AT_rich Low_complexity Low_complexity 1 38 0 333 43 0 0 chr5 118259679 118259725 -84825807 - L1PA3 LINE L1 -5 6150 6105 1240 74 6 0 chr5 118259725 118259900 -84825632 + L1PA4 LINE L1 5797 5977 -179 197 191 64 21 chr5 118259907 118259954 -84825578 + L2 LINE L2 3223 3271 -1 1307 217 56 20 chr5 118260144 118261537 -84823995 + L1MA9 LINE L1 4659 6287 -25 331 228 90 90 chr5 118262138 118262283 -84823249 + MIR SINE MIR 6 150 -112 440 306 66 5 chr5 118262304 118262500 -84823032 + L2 LINE L2 2840 3047 -266 196 306 198 8 chr5 118263097 118263218 -84822314 - MIR SINE MIR -15 247 104 280 313 80 0 chr5 118263786 118263898 -84821634 + MIR SINE MIR 125 245 -17 309 331 8 16 chr5 118264048 118264169 -84821363 + MLT1K LTR MaLR 9 128 -460 856 348 111 3 chr5 118264207 118264584 -84820948 + MLT1K LTR MaLR 96 513 -75 573 264 131 64 chr5 118264587 118264883 -84820649 + MLT1E LTR MaLR 1 316 -251 739 176 206 31 chr5 118264889 118265202 -84820330 + LTR1B LTR ERV1 14 429 -397 23 0 9 0 chr5 118265222 118265287 -84820245 + AT_rich Low_complexity Low_complexity 1 23 0 33 25 0 0 chr5 118265613 118265653 -84819879 + AT_rich Low_complexity Low_complexity 1 40 0 354 326 188 5 chr5 118265661 118265879 -84819653 - MIR SINE MIR 0 262 5 752 212 148 72 chr5 118266013 118266418 -84819114 + LTR1B LTR ERV1 391 826 0 911 267 0 36 chr5 118266418 118266699 -84818833 + MLT1E LTR MaLR 323 593 0 396 340 20 14 chr5 118267362 118267509 -84818023 - MIR3 SINE MIR -31 177 30 3503 300 103 49 chr5 118267848 118268278 -84817254 + L2 LINE L2 120 525 -2789 1380 190 23 96 chr5 118268278 118268672 -84816860 + MLT1A1 LTR MaLR 1 365 0 3503 300 103 49 chr5 118268672 118269680 -84815852 + L2 LINE L2 525 1714 -1600 312 27 0 0 chr5 118269680 118269717 -84815815 + (CA)n Simple_repeat Simple_repeat 1 37 0 3503 300 103 49 chr5 118269717 118270418 -84815114 + L2 LINE L2 1714 2376 -938 247 238 16 0 chr5 118270639 118270702 -84814830 + L1MEc LINE L1 362 425 -6296 706 287 126 40 chr5 118271577 118272697 -84812835 + L1MEc LINE L1 1259 2523 -4198 922 106 50 12 chr5 118273474 118273634 -84811898 + L1MA4 LINE L1 6130 6295 -5 427 319 138 9 chr5 118273675 118273885 -84811647 + MIR SINE MIR 20 256 -6 218 224 20 0 chr5 118275074 118275123 -84810409 + MIR SINE MIR 82 131 -131 340 302 22 43 chr5 118276800 118276939 -84808593 + MIR SINE MIR 73 208 -54 425 108 0 0 chr5 118278030 118278095 -84807437 + L1PA16 LINE L1 6095 6159 -7 22 0 0 0 chr5 118279139 118279161 -84806371 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 118279181 118279204 -84806328 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 118279411 118279439 -84806093 + AT_rich Low_complexity Low_complexity 1 28 0 34 65 0 0 chr5 118279511 118279573 -84805959 + AT_rich Low_complexity Low_complexity 1 62 0 353 309 198 9 chr5 118279581 118279798 -84805734 - MIR SINE MIR 0 262 5 381 330 59 23 chr5 118280039 118280260 -84805272 + MIR SINE MIR 20 248 -14 1557 160 28 24 chr5 118280691 118280979 -84804553 + AluJo SINE Alu 1 289 -23 24 32 0 0 chr5 118280979 118281010 -84804522 + AT_rich Low_complexity Low_complexity 1 31 0 401 246 45 52 chr5 118282104 118282238 -84803294 - L2 LINE L2 0 3272 3140 1687 157 50 30 chr5 118282547 118282846 -84802686 + AluJo SINE Alu 1 305 -7 1753 170 43 9 chr5 118285213 118285536 -84799996 - MER7A DNA MER2_type -1 345 14 204 163 0 0 chr5 118286528 118286571 -84798961 + CT-rich Low_complexity Low_complexity 2 44 0 21 0 0 0 chr5 118288525 118288546 -84796986 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 118289121 118289142 -84796390 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr5 118291005 118291045 -84794487 + AT_rich Low_complexity Low_complexity 1 40 0 208 356 107 18 chr5 118291408 118291633 -84793899 - MIR SINE MIR -12 250 6 31 58 0 0 chr5 118292239 118292291 -84793241 + AT_rich Low_complexity Low_complexity 1 52 0 835 123 55 20 chr5 118292325 118292471 -84793061 - L1MA4 LINE L1 -280 6020 5870 551 117 11 0 chr5 118292725 118292819 -84792713 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 2316 81 0 0 chr5 118293077 118293374 -84792158 + AluY SINE Alu 1 297 -14 467 297 38 14 chr5 118293635 118293847 -84791685 - L1M4c LINE L1 -1678 4468 4252 359 349 97 4 chr5 118293876 118294134 -84791398 - L1M4c LINE L1 -1950 4196 3915 5407 156 34 6 chr5 118294142 118295568 -84789964 - L1PB2 LINE L1 -1 6150 4686 696 327 108 55 chr5 118295592 118296875 -84788657 - L1M4c LINE L1 -2248 3898 2548 242 86 0 0 chr5 118297074 118297109 -84788423 - L1P LINE L1 -3966 2180 2146 2265 146 47 5 chr5 118297503 118297927 -84787605 + L1MA5A LINE L1 5852 6293 -4 544 352 81 26 chr5 118297957 118298413 -84787119 - L1M4c LINE L1 -946 1448 65 507 331 31 0 chr5 118299830 118299990 -84785542 + MIR SINE MIR 26 190 -72 25 31 0 0 chr5 118301554 118301586 -84783946 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr5 118302990 118303017 -84782515 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr5 118303298 118303333 -84782199 + AT_rich Low_complexity Low_complexity 1 35 0 508 125 60 4 chr5 118303402 118303510 -84782022 + L1MB3 LINE L1 5389 5496 -795 567 163 16 8 chr5 118303515 118303644 -84781888 + GA-rich Low_complexity Low_complexity 2 131 0 3232 153 70 24 chr5 118303646 118304313 -84781219 + L1MB3 LINE L1 5478 6175 -8 255 234 9 72 chr5 118305465 118305576 -84779956 - MER4-int LTR ERV1 -5444 1154 1051 269 241 0 0 chr5 118306435 118306489 -84779043 - LTR33 LTR ERVL 0 521 468 750 200 75 6 chr5 118306527 118306687 -84778845 - MIR SINE MIR -31 231 61 22 35 0 0 chr5 118309217 118309246 -84776286 + AT_rich Low_complexity Low_complexity 1 29 0 243 182 0 18 chr5 118311107 118311162 -84774370 - L1ME4a LINE L1 -90 6031 5978 510 296 157 53 chr5 118311222 118311792 -84773740 - L1ME4a LINE L1 -239 5882 5256 26558 138 12 14 chr5 118312221 118313440 -84772092 + L1PA8A LINE L1 3 1223 -5223 192 97 0 0 chr5 118313440 118313471 -84772061 + (CAA)n Simple_repeat Simple_repeat 3 33 0 26558 138 12 14 chr5 118313471 118318611 -84766921 + L1PA8A LINE L1 1223 6412 -34 2099 110 0 3 chr5 118318611 118318936 -84766596 - AluY SINE Alu 0 311 1 26558 138 12 14 chr5 118318936 118318971 -84766561 + L1PA8A LINE L1 6412 6446 0 556 321 12 45 chr5 118319249 118319364 -84766168 + L1MC4a LINE L1 5562 5679 -2129 1972 117 0 60 chr5 118319364 118319680 -84765852 + AluSx SINE Alu 1 297 -15 556 321 12 45 chr5 118319680 118319900 -84765632 + L1MC4a LINE L1 5679 5886 -1922 529 255 13 169 chr5 118320096 118320574 -84764958 + L2 LINE L2 2094 2496 -818 2499 54 0 10 chr5 118321254 118321568 -84763964 + AluY SINE Alu 1 311 0 22 35 0 0 chr5 118323227 118323256 -84762276 + AT_rich Low_complexity Low_complexity 1 29 0 733 205 58 80 chr5 118324768 118324992 -84760540 + MER20 DNA MER1_type 1 219 0 252 250 31 0 chr5 118325128 118325192 -84760340 - MIR3 SINE MIR -10 198 133 3194 147 0 10 chr5 118325475 118325977 -84759555 - LOR1a LTR ERV1 0 497 1 539 225 0 0 chr5 118326487 118326598 -84758934 + AluJo/FLAM SINE Alu 3 113 -199 * 594 184 0 18 chr5 118326593 118326707 -84758825 + FLAM_A SINE Alu 21 132 -10 514 274 15 136 chr5 118326721 118327053 -84758479 - MLT1I LTR MaLR -82 327 36 207 143 20 20 chr5 118327851 118327900 -84757632 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 336 289 7 30 chr5 118328432 118328567 -84756965 + (TATATG)n Simple_repeat Simple_repeat 5 136 0 2138 130 48 20 chr5 118328585 118328939 -84756593 - THE1B LTR MaLR 0 364 1 762 308 61 42 chr5 118328983 118329409 -84756123 + LTR16A LTR ERVL 17 450 0 565 267 29 29 chr5 118329451 118329623 -84755909 + MIR SINE MIR 91 262 0 21 71 0 0 chr5 118330444 118330486 -84755046 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 118330500 118330522 -84755010 + AT_rich Low_complexity Low_complexity 1 22 0 567 0 0 0 chr5 118330574 118330637 -84754895 + (TAAAA)n Simple_repeat Simple_repeat 3 65 0 249 231 146 39 chr5 118330645 118330775 -84754757 + L1M4b LINE L1 82 225 -6634 1033 262 8 14 chr5 118330780 118331131 -84754401 + L1M4b LINE L1 1674 2022 -4833 846 276 8 8 chr5 118331133 118331394 -84754138 + L1M4b LINE L1 2946 3206 -3751 * 1331 225 33 0 chr5 118331389 118331696 -84753836 + L1MA4 LINE L1 5982 6298 -2 1026 231 58 22 chr5 118331703 118332066 -84753466 + L1M4b LINE L1 3196 3571 -3386 24 0 0 0 chr5 118332423 118332447 -84753085 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr5 118332607 118332648 -84752884 + AT_rich Low_complexity Low_complexity 1 41 0 2390 80 0 0 chr5 118332981 118333280 -84752252 + AluY SINE Alu 1 299 -12 1465 207 37 14 chr5 118334023 118334376 -84751156 + MLT1A1 LTR MaLR 5 365 0 1530 174 85 15 chr5 118335278 118335635 -84749897 - MSTA LTR MaLR 0 375 1 621 140 9 9 chr5 118335774 118335881 -84749651 + LTR40b LTR ERVL 356 462 0 2016 128 54 26 chr5 118335950 118336302 -84749230 - THE1B LTR MaLR -2 362 1 494 326 64 0 chr5 118336421 118336593 -84748939 + MIR SINE MIR 36 218 -44 1399 272 95 77 chr5 118336615 118337094 -84748438 - L2 LINE L2 -10 3303 2834 2287 113 3 0 chr5 118337094 118337404 -84748128 + AluSq SINE Alu 3 313 0 1399 272 95 77 chr5 118337404 118337965 -84747567 - L2 LINE L2 -479 2834 2264 470 360 22 39 chr5 118340549 118340907 -84744625 + L1MC4 LINE L1 187 538 -6025 403 273 16 29 chr5 118341335 118341531 -84744001 + L1MC4 LINE L1 816 1136 -5236 753 281 60 45 chr5 118341625 118342206 -84743326 + L1MC4 LINE L1 1030 1566 -4818 * 3281 261 83 29 chr5 118342195 118344119 -84741413 + L1MC4 LINE L1 1952 3922 -2460 1630 269 48 18 chr5 118344157 118344659 -84740873 + L1ME2 LINE L1 9 525 -5520 * 1886 230 70 46 chr5 118344656 118345465 -84740067 + L1ME2 LINE L1 1140 2166 -4579 1860 225 68 37 chr5 118345485 118346106 -84739426 + L1ME2 LINE L1 5873 6512 -70 2441 71 0 3 chr5 118348020 118348330 -84737202 - AluY SINE Alu -2 309 1 205 414 106 11 chr5 118348400 118348779 -84736753 - L2 LINE L2 -51 3221 2807 258 32 0 0 chr5 118349424 118349455 -84736077 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 261 57 0 0 chr5 118349587 118349622 -84735910 + (T)n Simple_repeat Simple_repeat 1 35 0 47 44 0 0 chr5 118352470 118352538 -84732994 + AT_rich Low_complexity Low_complexity 1 68 0 365 266 177 0 chr5 118352813 118352971 -84732561 - L2 LINE L2 0 3313 3128 722 299 79 9 chr5 118353299 118353617 -84731915 + MER102b DNA MER1_type 2 341 0 3695 244 59 23 chr5 118355313 118356432 -84729100 - MER69B DNA AcHobo 0 1226 68 325 220 46 55 chr5 118356775 118356884 -84728648 - L2 LINE L2 -14 3299 3192 22 0 0 0 chr5 118358511 118358533 -84726999 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 118358970 118358992 -84726540 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr5 118360276 118360328 -84725204 + AT_rich Low_complexity Low_complexity 1 52 0 2191 110 7 0 chr5 118360510 118360856 -84724676 - AluSq SINE Alu 0 348 1 362 261 25 0 chr5 118360980 118361099 -84724433 + L1MC4 LINE L1 3951 4072 -2310 287 57 0 0 chr5 118361164 118361199 -84724333 - U2 snRNA snRNA -153 35 1 1085 296 88 20 chr5 118361200 118362191 -84723341 + L1MC4 LINE L1 4122 5179 -1203 3950 188 69 14 chr5 118362397 118363603 -84721929 + L1MB7 LINE L1 4847 6124 -60 222 91 0 0 chr5 118364068 118364101 -84721431 + (TG)n Simple_repeat Simple_repeat 2 34 0 261 289 13 0 chr5 118364113 118364189 -84721343 + (TA)n Simple_repeat Simple_repeat 2 78 0 314 333 9 0 chr5 118364217 118364331 -84721201 + L1MC4 LINE L1 5405 5519 -863 493 229 42 0 chr5 118364335 118364453 -84721079 - L1PB4 LINE L1 -14 6142 6020 473 278 86 51 chr5 118364453 118365037 -84720495 + L1MC4 LINE L1 5513 6052 -346 22 70 0 0 chr5 118365285 118365328 -84720204 + AT_rich Low_complexity Low_complexity 1 43 0 294 206 0 0 chr5 118366766 118366834 -84718698 + (CA)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 118366966 118366987 -84718545 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 118367806 118367838 -84717694 + AT_rich Low_complexity Low_complexity 1 32 0 1375 113 9 0 chr5 118368142 118368364 -84717168 + L1MA5A LINE L1 6074 6297 0 21 0 0 0 chr5 118368533 118368554 -84716978 + AT_rich Low_complexity Low_complexity 1 21 0 238 239 45 0 chr5 118368896 118368984 -84716548 + HAL1 LINE L1 1373 1464 -1043 203 0 37 0 chr5 118369551 118369578 -84715954 + (TTA)n Simple_repeat Simple_repeat 3 30 0 2488 64 0 0 chr5 118369578 118369890 -84715642 - L1PA5 LINE L1 -18 6136 5825 836 163 56 6 chr5 118370136 118370314 -84715218 + L1MB3 LINE L1 5992 6178 -5 23 86 0 0 chr5 118370319 118370377 -84715155 + AT_rich Low_complexity Low_complexity 1 58 0 338 335 38 65 chr5 118370892 118371155 -84714377 - L3b LINE CR1 -220 1363 1108 2199 165 23 26 chr5 118371336 118371766 -84713766 + MSTB1 LTR MaLR 4 432 0 293 321 102 7 chr5 118371937 118372074 -84713458 + LTR16A LTR ERVL 301 450 0 1465 303 49 10 chr5 118372084 118372659 -84712873 + HERV16 LTR ERVL 10 606 -4390 308 29 0 0 chr5 118372660 118372695 -84712837 + U2 snRNA snRNA 1 35 -153 251 375 0 8 chr5 118372695 118372815 -84712717 + HERVL LTR ERVL 3204 3322 -2332 524 211 0 79 chr5 118372835 118372949 -84712583 - MER81 DNA DNA -5 109 5 688 348 70 16 chr5 118372955 118373473 -84712059 + HERVL LTR ERVL 3353 3891 -1594 1465 178 3 65 chr5 118373854 118374175 -84711357 - AluJb SINE Alu -5 307 7 577 307 98 25 chr5 118374320 118374727 -84710805 + LTR16A LTR ERVL 4 440 -10 237 108 0 0 chr5 118375560 118375597 -84709935 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 586 283 84 20 chr5 118375626 118375877 -84709655 - MLT1L LTR MaLR 0 615 349 534 310 93 41 chr5 118375941 118376286 -84709246 - MLT1I LTR MaLR 0 409 47 255 152 0 0 chr5 118377243 118377289 -84708243 + (TG)n Simple_repeat Simple_repeat 2 47 0 320 305 51 8 chr5 118378037 118378155 -84707377 - MIR3 SINE MIR -11 197 75 639 236 118 32 chr5 118378573 118378887 -84706645 - L1MC/D LINE L1 -2196 5612 5272 369 325 88 15 chr5 118378959 118379233 -84706299 - L1MC/D LINE L1 -975 5171 4878 472 295 40 7 chr5 118383132 118383281 -84702251 - MIR SINE MIR -89 173 20 328 108 0 31 chr5 118385009 118385074 -84700458 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 261 233 12 12 chr5 118385223 118385309 -84700223 + (TCCGG)n Simple_repeat Simple_repeat 2 87 0 187 30 30 30 chr5 118385414 118385447 -84700085 + (TTTCG)n Simple_repeat Simple_repeat 2 34 0 1895 171 7 3 chr5 118385612 118385956 -84699576 - AluJo SINE Alu 0 346 2 284 295 71 23 chr5 118388011 118388191 -84697341 - MIR SINE MIR -55 207 13 789 261 35 31 chr5 118388624 118388771 -84696761 - MIR SINE MIR 0 262 112 1751 147 72 33 chr5 118388771 118389132 -84696400 - THE1C LTR MaLR 0 375 1 789 261 35 31 chr5 118389132 118389241 -84696291 - MIR SINE MIR -150 112 5 285 301 42 89 chr5 118389289 118389548 -84695984 - L2 LINE L2 -160 3112 2866 1575 203 10 17 chr5 118389571 118389871 -84695661 + AluJb SINE Alu 3 300 -12 1499 173 50 123 chr5 118390111 118390532 -84695000 - MLT1F1 LTR MaLR 0 567 178 338 279 86 66 chr5 118390551 118390748 -84694784 - MLT1F1 LTR MaLR -341 201 1 206 340 52 0 chr5 118390754 118390851 -84694681 - L2 LINE L2 -962 2352 2251 264 267 133 33 chr5 118392505 118392655 -84692877 - MIR SINE MIR -40 222 58 248 355 102 32 chr5 118392761 118393201 -84692331 + L2 LINE L2 137 607 -2707 219 227 0 0 chr5 118393383 118393449 -84692083 + (CTA)n Simple_repeat Simple_repeat 2 67 0 510 215 8 16 chr5 118393473 118393594 -84691938 - MIR SINE MIR -16 246 127 227 357 86 36 chr5 118393672 118393812 -84691720 + L2 LINE L2 3125 3271 -1 208 333 0 0 chr5 118393851 118393902 -84691630 - L2 LINE L2 -48 3224 3174 1858 187 75 2 chr5 118393966 118394368 -84691164 - Zaphod DNA AcHobo -11 4020 3590 * 3225 205 65 47 chr5 118394363 118394501 -84691031 - Zaphod DNA AcHobo -3044 987 853 1219 119 28 46 chr5 118394501 118394719 -84690813 + L1MB2 LINE L1 5957 6170 -1 3225 205 65 47 chr5 118394719 118395445 -84690087 - Zaphod DNA AcHobo -3178 853 108 366 293 275 0 chr5 118396841 118396979 -84688553 + MIR3 SINE MIR 45 219 -43 633 224 73 18 chr5 118397636 118397801 -84687731 + MIR SINE MIR 27 200 -62 227 277 115 62 chr5 118397840 118397970 -84687562 - L2 LINE L2 -12 3301 3165 2149 107 7 3 chr5 118398481 118398779 -84686753 + AluSq SINE Alu 1 299 -14 1043 167 6 0 chr5 118399610 118399784 -84685748 + AluSc SINE Alu 125 299 -10 233 214 0 0 chr5 118400211 118400253 -84685279 + L2 LINE L2 3264 3305 -8 226 214 0 0 chr5 118400816 118400858 -84684674 + GA-rich Low_complexity Low_complexity 3 44 0 398 264 8 25 chr5 118402952 118403073 -84682459 - 7SK RNA RNA -74 119 1 203 313 40 67 chr5 118403631 118403781 -84681751 + MER5A DNA MER1_type 39 184 -5 430 217 12 0 chr5 118403806 118403889 -84681643 + L2 LINE L2 3189 3272 0 187 212 15 91 chr5 118405503 118405569 -84679963 - L2 LINE L2 -2 3311 3251 293 239 65 22 chr5 118405661 118405753 -84679779 - MIR SINE MIR -57 205 110 1978 238 235 17 chr5 118405764 118406635 -84678897 + L2 LINE L2 1986 3047 -266 185 290 145 0 chr5 118406838 118406900 -84678632 + MER5C DNA MER1_type 253 323 -1 386 270 79 20 chr5 118407779 118407931 -84677601 + MIR SINE MIR 59 219 -43 419 165 0 142 chr5 118408052 118408115 -84677417 + MLT1D LTR MaLR 1 39 -587 2437 187 29 0 chr5 118408115 118408527 -84677005 + MSTB LTR MaLR 3 426 0 419 165 0 142 chr5 118408527 118408590 -84676942 + MLT1D LTR MaLR 39 109 -517 723 77 0 0 chr5 118408593 118408684 -84676848 + AluSg/x SINE Alu 209 299 -11 1754 153 71 20 chr5 118408703 118409056 -84676476 + MLT1D LTR MaLR 131 501 -4 794 202 73 11 chr5 118410241 118410419 -84675113 + MER5A DNA MER1_type 1 189 0 575 253 12 30 chr5 118410711 118410877 -84674655 + Charlie8 DNA MER1_type 88 250 -2167 231 146 0 0 chr5 118411050 118411091 -84674441 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 280 266 63 35 chr5 118411166 118411309 -84674223 + MIR SINE MIR 95 241 -21 208 286 191 8 chr5 118411806 118411932 -84673600 - L2 LINE L2 -147 3125 2977 688 278 42 35 chr5 118412038 118412297 -84673235 - MER102b DNA MER1_type -11 330 70 6423 235 29 8 chr5 118413460 118413972 -84671560 + L1M4 LINE L1 3364 3864 -2282 2639 127 58 34 chr5 118413972 118414388 -84671144 + MSTB LTR MaLR 1 426 0 6423 235 29 8 chr5 118414388 118415560 -84669972 + L1M4 LINE L1 3864 5084 -1062 646 218 8 15 chr5 118415579 118415712 -84669820 + MSTD LTR MaLR 1 132 -264 2364 82 0 0 chr5 118416460 118416751 -84668781 - AluY SINE Alu -20 291 1 2207 103 0 3 chr5 118416994 118417286 -84668246 - AluSx SINE Alu -21 291 1 180 317 61 0 chr5 118418839 118418921 -84666611 + MIR SINE MIR 68 154 -108 743 201 45 50 chr5 118419320 118419499 -84666033 - MER5B DNA MER1_type 0 178 1 381 335 38 13 chr5 118419541 118419699 -84665833 + MER5B DNA MER1_type 1 162 -16 362 379 97 0 chr5 118419876 118420082 -84665450 - MIR SINE MIR -5 257 32 273 281 31 73 chr5 118420082 118420178 -84665354 + MER5A DNA MER1_type 1 92 -97 200 371 15 56 chr5 118420386 118420583 -84664949 - L2 LINE L2 -212 3060 2872 819 225 34 38 chr5 118421164 118421373 -84664159 - MER3 DNA MER1_type -1 208 1 192 271 157 0 chr5 118421642 118421712 -84663820 + L2 LINE L2 3182 3262 -10 280 303 13 0 chr5 118422238 118422314 -84663218 + L2 LINE L2 3191 3267 -5 263 250 87 29 chr5 118422376 118422480 -84663052 - MIR SINE MIR -46 216 107 367 294 133 47 chr5 118422571 118422850 -84662682 - LTR33 LTR ERVL -151 370 68 22 35 0 0 chr5 118423215 118423244 -84662288 + AT_rich Low_complexity Low_complexity 1 29 0 402 316 70 11 chr5 118424294 118424481 -84661051 - MIR SINE MIR -58 204 7 428 285 36 12 chr5 118424545 118424710 -84660822 + MIR SINE MIR 93 261 -1 419 297 27 7 chr5 118425200 118425348 -84660184 + L3 LINE CR1 1426 1576 -1 1611 203 10 163 chr5 118425625 118426615 -84658917 - L1MCa LINE L1 -3207 3219 2388 2747 197 88 71 chr5 118426623 118427183 -84658349 - L1MCa LINE L1 -4008 2418 1832 2556 45 19 3 chr5 118427183 118427491 -84658041 + L1PA4 LINE L1 5843 6155 0 2747 197 88 71 chr5 118427491 118427947 -84657585 - L1MCa LINE L1 -4594 1832 1385 454 251 51 63 chr5 118428375 118428550 -84656982 + MIR SINE MIR 15 187 -75 22 56 0 0 chr5 118429417 118429453 -84656079 + AT_rich Low_complexity Low_complexity 1 36 0 315 0 0 0 chr5 118429722 118429757 -84655775 + (TG)n Simple_repeat Simple_repeat 2 36 0 392 269 34 8 chr5 118431235 118431354 -84654178 + MIR SINE MIR 69 190 -72 5156 185 34 12 chr5 118432623 118433012 -84652520 + L1ME2 LINE L1 3 382 -6044 2496 103 26 63 chr5 118433012 118433390 -84652142 - THE1B LTR MaLR 0 364 1 12360 95 9 2 chr5 118433390 118434959 -84650573 - THE1B-int LTR MaLR 0 1580 1 2013 171 73 14 chr5 118434959 118435303 -84650229 - THE1B LTR MaLR 0 364 1 5156 185 34 12 chr5 118435303 118435872 -84649660 + L1ME2 LINE L1 381 984 -5442 189 196 0 0 chr5 118438006 118438057 -84647475 + (TAA)n Simple_repeat Simple_repeat 3 53 0 2933 245 65 39 chr5 118438555 118439532 -84646000 + L1ME2 LINE L1 4337 5338 -1088 286 296 50 89 chr5 118439558 118439737 -84645795 - L2 LINE L2 -268 3045 2874 394 220 83 38 chr5 118439739 118439871 -84645661 + L1ME2 LINE L1 5341 5478 -948 2870 228 36 52 chr5 118439916 118440900 -84644632 + L1ME2 LINE L1 5468 6435 -9 2054 181 34 6 chr5 118441006 118441359 -84644173 - MLT1A1 LTR MaLR 0 365 3 1604 217 92 0 chr5 118441366 118441725 -84643807 - MLT1A1-int LTR MaLR -6 1729 1338 1717 183 3 10 chr5 118441962 118442257 -84643275 - AluJb SINE Alu -19 293 1 297 330 59 3 chr5 118442278 118442464 -84643068 - L2 LINE L2 -19 3253 2999 230 368 59 33 chr5 118443003 118443155 -84642377 + L2 LINE L2 3116 3271 -1 403 219 50 62 chr5 118443351 118443511 -84642021 + L2 LINE L2 3152 3309 -4 981 280 74 81 chr5 118444662 118445035 -84640497 - L2 LINE L2 -271 3042 2662 327 145 0 0 chr5 118445035 118445097 -84640435 + L1MA7 LINE L1 6230 6291 0 981 280 74 81 chr5 118445097 118445326 -84640206 - L2 LINE L2 -651 2662 2433 1570 122 4 0 chr5 118445326 118445563 -84639969 - THE1A LTR MaLR 0 355 118 17745 67 10 0 chr5 118445564 118447898 -84637634 + HERVL-A1 LTR ERVL 3298 5654 0 2887 96 0 0 chr5 118447898 118448296 -84637236 + MLT2A1 LTR ERVL 1 398 -46 315 174 0 0 chr5 118448297 118448383 -84637149 + (TA)n Simple_repeat Simple_repeat 1 86 0 275 40 140 0 chr5 118448386 118448436 -84637096 + MLT2A1 LTR ERVL 388 444 0 550 290 122 42 chr5 118448448 118448710 -84636822 - L2 LINE L2 -904 2410 2128 552 238 101 60 chr5 118448907 118449327 -84636205 - L2 LINE L2 -150 3163 2728 417 344 43 6 chr5 118449598 118449761 -84635771 - MIR3 SINE MIR -2 206 38 705 224 0 0 chr5 118449960 118450076 -84635456 - FLAM_A SINE Alu -17 116 1 2214 106 0 34 chr5 118450725 118451045 -84634487 - AluSg SINE Alu -1 309 1 242 309 140 15 chr5 118452612 118452748 -84632784 + L2 LINE L2 3119 3271 -1 491 217 172 6 chr5 118452868 118453023 -84632509 + MER5A DNA MER1_type 4 188 -1 23 0 0 0 chr5 118454288 118454311 -84631221 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 118454377 118454421 -84631111 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 118454444 118454489 -84631043 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1110 259 84 39 chr5 118455251 118455633 -84629899 - L3 LINE CR1 -108 1469 1071 2141 128 0 10 chr5 118455689 118455995 -84629537 + AluSx SINE Alu 1 303 -9 270 284 108 7 chr5 118456071 118456210 -84629322 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 118456311 118456352 -84629180 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 118456874 118456908 -84628624 + AT_rich Low_complexity Low_complexity 1 34 0 2349 102 3 0 chr5 118457291 118457595 -84627937 - AluSc SINE Alu -4 305 1 264 98 20 20 chr5 118457834 118457885 -84627647 - HSMAR1 DNA Mariner 0 1287 1237 569 278 39 42 chr5 118457978 118458184 -84627348 - MIR SINE MIR -57 205 1 505 244 84 66 chr5 118458308 118458521 -84627011 - MIR SINE MIR -36 226 10 2475 147 26 5 chr5 118459298 118459721 -84625811 + Tigger2a DNA MER2_type 2 433 -1 1969 146 7 20 chr5 118460134 118460436 -84625096 + AluJb SINE Alu 2 299 -13 198 0 0 0 chr5 118461834 118461856 -84623676 + (T)n Simple_repeat Simple_repeat 1 22 0 321 313 61 0 chr5 118464117 118464216 -84621316 + L2 LINE L2 3159 3263 -9 1433 191 58 36 chr5 118465563 118465925 -84619607 + MLT1A2 LTR MaLR 1 370 -4 216 0 0 0 chr5 118469445 118469469 -84616063 + (A)n Simple_repeat Simple_repeat 1 24 0 1932 100 0 0 chr5 118470136 118470407 -84615125 + L1PA8 LINE L1 5902 6172 0 2021 149 0 0 chr5 118471550 118471839 -84613693 - AluSx SINE Alu -23 289 1 653 258 26 86 chr5 118472497 118472765 -84612767 + MIR SINE MIR 1 252 -10 2125 97 26 26 chr5 118472985 118473296 -84612236 + AluY SINE Alu 1 311 0 396 258 47 16 chr5 118473935 118474063 -84611469 - L2 LINE L2 -4 3309 3178 2194 117 7 0 chr5 118474353 118474660 -84610872 - AluSx SINE Alu 0 312 4 242 237 0 13 chr5 118475458 118475534 -84609998 - L1MEc LINE L1 -4302 2094 2020 3235 49 2 84 chr5 118475535 118476021 -84609511 - L1PA7 LINE L1 -2 6152 5707 763 236 44 38 chr5 118476188 118476481 -84609051 - L1M4 LINE L1 -3669 2477 2183 1924 168 24 35 chr5 118477370 118477793 -84607739 + MSTB1 LTR MaLR 15 432 0 596 250 47 17 chr5 118478947 118479119 -84606413 + MER5A DNA MER1_type 10 186 -3 25 31 0 0 chr5 118479303 118479335 -84606197 + AT_rich Low_complexity Low_complexity 1 32 0 610 318 67 0 chr5 118479454 118479677 -84605855 - MIR SINE MIR -21 241 4 340 350 0 21 chr5 118479840 118479937 -84605595 - L2 LINE L2 -22 3250 3156 489 250 158 24 chr5 118480197 118480361 -84605171 + MIR SINE MIR 45 230 -32 5012 166 19 6 chr5 118480639 118481742 -84603790 + L1MA5 LINE L1 5182 6300 0 206 195 49 0 chr5 118481775 118481816 -84603716 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 592 203 169 34 chr5 118485272 118485449 -84600083 + MIR SINE MIR 62 262 0 5699 183 23 2 chr5 118485952 118487130 -84598402 - L1P LINE L1 -883 5263 4061 1429 124 4 29 chr5 118487130 118487367 -84598165 + L1PA13 LINE L1 5929 6163 0 310 343 50 22 chr5 118488023 118488204 -84597328 + MLT1J2 LTR MaLR 265 450 0 21 57 0 0 chr5 118488228 118488263 -84597269 + AT_rich Low_complexity Low_complexity 1 35 0 249 302 0 0 chr5 118489207 118489270 -84596262 + L2 LINE L2 3251 3313 0 3547 121 57 30 chr5 118489919 118490555 -84594977 + MER39B LTR ERV1 1 653 0 389 265 118 12 chr5 118490964 118491134 -84594398 + MER5A DNA MER1_type 1 188 -1 5939 156 55 3 chr5 118491700 118493168 -84592364 + L1MC1 LINE L1 4776 6328 -5 361 258 192 0 chr5 118495388 118495539 -84589993 + MIR SINE MIR 13 192 -70 360 352 171 3 chr5 118496825 118497135 -84588397 + L2 LINE L2 1933 2294 -1020 28 95 0 0 chr5 118497245 118497329 -84588203 + AT_rich Low_complexity Low_complexity 1 84 0 212 338 14 0 chr5 118497590 118497661 -84587871 + L2 LINE L2 3242 3313 0 2056 144 0 13 chr5 118497739 118498051 -84587481 + AluSx SINE Alu 1 308 -4 1286 287 52 36 chr5 118498663 118499472 -84586060 - L2 LINE L2 -1 3312 2479 264 385 76 21 chr5 118499528 118499819 -84585713 + L2 LINE L2 2438 2744 -570 2778 98 0 3 chr5 118500105 118500481 -84585051 + THE1C LTR MaLR 1 375 0 9829 125 40 16 chr5 118500481 118502024 -84583508 + THE1C-int LTR MaLR 1 1580 0 2571 103 24 8 chr5 118502024 118502393 -84583139 + THE1C LTR MaLR 1 375 0 233 343 163 0 chr5 118502887 118503126 -84582406 + L2 LINE L2 2221 2498 -816 571 235 30 63 chr5 118503516 118503674 -84581858 - MLT1J2 LTR MaLR -254 155 1 2136 168 18 63 chr5 118503882 118504328 -84581204 - MSTB LTR MaLR 0 426 1 2506 277 86 51 chr5 118505622 118506097 -84579435 - L2 LINE L2 0 3313 2856 1981 96 4 4 chr5 118506097 118506367 -84579165 + AluSx SINE Alu 42 311 -1 2506 277 86 51 chr5 118506367 118506414 -84579118 - L2 LINE L2 -457 2856 2812 219 36 0 0 chr5 118506414 118506442 -84579090 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2506 277 86 51 chr5 118506442 118507230 -84578302 - L2 LINE L2 -501 2812 1956 402 324 86 16 chr5 118507347 118507591 -84577941 - MIR SINE MIR 0 262 2 478 313 27 7 chr5 118508120 118508270 -84577262 + MIR SINE MIR 106 258 -4 381 274 52 104 chr5 118513362 118513650 -84571882 - Charlie8 DNA MER1_type -2143 274 2 21 0 0 0 chr5 118513990 118514011 -84571521 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr5 118514517 118514542 -84570990 + (A)n Simple_repeat Simple_repeat 1 25 0 405 39 0 0 chr5 118515133 118515184 -84570348 + (TG)n Simple_repeat Simple_repeat 2 52 0 2114 121 0 7 chr5 118516207 118516514 -84569018 - AluSg SINE Alu -5 305 1 580 261 140 27 chr5 118516904 118517126 -84568406 - MIR SINE MIR -3 259 13 200 235 15 88 chr5 118517210 118517278 -84568254 + MIR3 SINE MIR 110 172 -36 750 233 94 67 chr5 118517467 118517798 -84567734 + MER102b DNA MER1_type 1 340 -1 1525 213 0 30 chr5 118517832 118518137 -84567395 + AluJo SINE Alu 1 296 -16 273 29 0 0 chr5 118518264 118518298 -84567234 + (CA)n Simple_repeat Simple_repeat 1 34 0 1655 142 8 16 chr5 118519578 118519831 -84565701 + AluSq SINE Alu 1 251 -62 2022 126 83 11 chr5 118519988 118520338 -84565194 - THE1C LTR MaLR 0 375 1 9454 117 19 42 chr5 118520344 118521954 -84563578 - THE1C-int LTR MaLR -7 1573 1 1824 168 44 14 chr5 118521954 118522318 -84563214 - THE1C LTR MaLR 0 375 1 210 299 46 63 chr5 118522345 118522519 -84563013 + L2 LINE L2 2404 2574 -740 820 312 6 58 chr5 118522634 118522945 -84562587 + L2 LINE L2 2978 3272 0 2007 112 42 7 chr5 118523120 118523406 -84562126 + AluSx SINE Alu 14 309 -3 26 30 0 0 chr5 118523856 118523889 -84561643 + AT_rich Low_complexity Low_complexity 1 33 0 381 296 33 26 chr5 118525508 118525660 -84559872 - MIR SINE MIR -31 231 79 252 0 0 0 chr5 118525714 118525742 -84559790 + (TC)n Simple_repeat Simple_repeat 1 28 0 * 288 0 0 0 chr5 118525741 118525773 -84559759 + (CA)n Simple_repeat Simple_repeat 1 32 0 253 372 61 27 chr5 118526216 118526509 -84559023 + L2 LINE L2 2226 2528 -786 188 366 78 26 chr5 118526649 118526840 -84558692 + L2 LINE L2 2777 2977 -337 635 354 97 38 chr5 118526989 118527642 -84557890 - L2 LINE L2 -350 2964 2274 325 282 12 47 chr5 118528805 118528890 -84556642 - MIR SINE MIR -147 115 34 320 294 132 0 chr5 118529517 118529653 -84555879 + MIR SINE MIR 15 168 -94 943 257 94 27 chr5 118530074 118530479 -84555053 - MLT1C LTR MaLR -2 465 34 27 0 0 0 chr5 118530846 118530873 -84554659 + AT_rich Low_complexity Low_complexity 1 27 0 29 47 0 0 chr5 118532150 118532193 -84553339 + AT_rich Low_complexity Low_complexity 1 43 0 304 354 90 28 chr5 118532254 118532432 -84553100 - MER5A DNA MER1_type 0 189 1 259 271 29 0 chr5 118533273 118533343 -84552189 + L2 LINE L2 3237 3308 -5 2300 129 23 18 chr5 118534912 118535300 -84550232 + MLT1B LTR MaLR 1 390 0 517 269 80 120 chr5 118535680 118536055 -84549477 + L1MEd LINE L1 846 1291 -1199 1985 177 10 28 chr5 118536754 118537150 -84548382 - MLT1B LTR MaLR -1 389 1 22 35 0 0 chr5 118537735 118537764 -84547768 + AT_rich Low_complexity Low_complexity 1 29 0 694 280 86 6 chr5 118538083 118538397 -84547135 - LTR33 LTR ERVL -141 380 42 21 0 0 0 chr5 118539062 118539083 -84546449 + AT_rich Low_complexity Low_complexity 1 21 0 213 231 0 0 chr5 118539322 118539361 -84546171 - L2 LINE L2 -16 3297 3259 5564 123 17 4 chr5 118539361 118540343 -84545189 - L1PA15 LINE L1 -3 6162 5171 686 247 6 11 chr5 118540362 118540540 -84544992 + MER5B DNA MER1_type 2 178 0 440 259 184 7 chr5 118540559 118540706 -84544826 + MER5A DNA MER1_type 13 185 -4 180 250 0 58 chr5 118540786 118540838 -84544694 - MIR SINE MIR -200 62 14 27 29 0 0 chr5 118541055 118541089 -84544443 + AT_rich Low_complexity Low_complexity 1 34 0 2030 152 7 0 chr5 118541112 118541415 -84544117 + AluSx SINE Alu 1 305 -7 192 152 0 0 chr5 118542192 118542225 -84543307 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1677 187 3 13 chr5 118542459 118542759 -84542773 + AluJb SINE Alu 15 311 -1 2075 134 3 0 chr5 118544172 118544449 -84541083 + AluSq SINE Alu 4 279 -34 504 0 0 0 chr5 118544449 118544505 -84541027 + (CA)n Simple_repeat Simple_repeat 1 56 0 189 0 0 0 chr5 118544504 118544525 -84541007 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 2075 134 3 0 chr5 118544505 118544538 -84540994 + AluSq SINE Alu 279 295 -18 338 322 13 33 chr5 118544544 118544696 -84540836 + MIR3 SINE MIR 37 185 -23 21 71 0 0 chr5 118545023 118545065 -84540467 + AT_rich Low_complexity Low_complexity 1 42 0 322 252 48 87 chr5 118546436 118546642 -84538890 - MIR SINE MIR -45 217 20 2216 110 0 0 chr5 118546965 118547264 -84538268 - AluSx SINE Alu -13 299 1 298 172 35 0 chr5 118547604 118547662 -84537870 + L2 LINE L2 3252 3311 -2 311 339 37 58 chr5 118547749 118547938 -84537594 + MIR3 SINE MIR 23 207 -1 228 100 0 0 chr5 118549301 118549341 -84536191 + (TTCTC)n Simple_repeat Simple_repeat 4 43 0 403 306 114 85 chr5 118549345 118549987 -84535545 + L2 LINE L2 2596 3270 -2 253 337 51 16 chr5 118550003 118550142 -84535390 - MIR3 SINE MIR -69 139 9 351 284 158 36 chr5 118551431 118551653 -84533879 + MIR SINE MIR 2 250 -12 1531 68 0 143 chr5 118552288 118552554 -84532978 + MER30 DNA MER1_type 3 230 0 182 233 23 0 chr5 118552796 118552839 -84532693 - L2 LINE L2 -4 3309 3266 2437 123 28 22 chr5 118553180 118553580 -84531952 + L1PA16 LINE L1 5756 6157 -9 2302 73 0 0 chr5 118553613 118553901 -84531631 - AluY SINE Alu -23 288 1 21 0 0 0 chr5 118554574 118554595 -84530937 + AT_rich Low_complexity Low_complexity 1 21 0 313 276 92 40 chr5 118554720 118554872 -84530660 - MIR SINE MIR -45 217 58 531 290 87 0 chr5 118558149 118558332 -84527200 + L2 LINE L2 1483 1681 -1633 722 136 91 0 chr5 118558338 118558470 -84527062 + MLT1A1 LTR MaLR 222 365 0 474 301 205 24 chr5 118558470 118558846 -84526686 + L2 LINE L2 1719 2162 -1152 391 316 162 15 chr5 118558939 118559211 -84526321 - L2 LINE L2 -1219 2095 1784 192 274 11 84 chr5 118559932 118560027 -84525505 - L2 LINE L2 -1523 1791 1704 1406 127 51 133 chr5 118560029 118560360 -84525172 + AluJo SINE Alu 5 308 -4 368 244 33 0 chr5 118563590 118563680 -84521852 + Tigger7 DNA MER2_type 1 93 -2394 1386 191 77 0 chr5 118563691 118564016 -84521516 + Tigger7 DNA MER2_type 2117 2466 -21 220 159 45 0 chr5 118565266 118565310 -84520222 + GA-rich Low_complexity Low_complexity 1 46 0 463 326 73 65 chr5 118565395 118565438 -84520094 - L2 LINE L2 -252 3020 2979 2130 153 115 57 chr5 118565438 118565915 -84519617 - MLT1D LTR MaLR 0 505 1 463 326 73 65 chr5 118565915 118566464 -84519068 - L2 LINE L2 -293 2979 2415 261 0 0 0 chr5 118566705 118566734 -84518798 + (TG)n Simple_repeat Simple_repeat 2 30 0 706 267 30 46 chr5 118566845 118567148 -84518384 + LTR16A LTR ERVL 57 354 -96 346 319 70 30 chr5 118567336 118567706 -84517826 + HERV16 LTR ERVL 3484 3868 -1128 382 303 9 0 chr5 118567904 118568013 -84517519 - ERVL LTR ERVL -1393 4371 4262 807 290 83 18 chr5 118568474 118568840 -84516692 + LTR16A LTR ERVL 43 441 -9 376 301 74 35 chr5 118568916 118569145 -84516387 + L2 LINE L2 2295 2532 -782 900 298 87 72 chr5 118569794 118570445 -84515087 + L2 LINE L2 2295 2988 -325 1552 185 23 23 chr5 118570445 118570753 -84514779 - AluJo SINE Alu -4 308 1 900 298 87 72 chr5 118570753 118571080 -84514452 + L2 LINE L2 2988 3309 -4 268 181 42 54 chr5 118571080 118571246 -84514286 + (TATAA)n Simple_repeat Simple_repeat 5 168 0 3940 168 81 21 chr5 118571261 118572136 -84513396 + L1MA9 LINE L1 5384 6311 -1 28 48 0 0 chr5 118572748 118572790 -84512742 + AT_rich Low_complexity Low_complexity 1 42 0 364 310 32 7 chr5 118573463 118573618 -84511914 - L2 LINE L2 -5 3308 3150 324 308 21 35 chr5 118573597 118573740 -84511792 - MIR SINE MIR -3 259 119 * 463 314 124 56 chr5 118573810 118574287 -84511245 - L2 LINE L2 -52 3261 2736 22 0 0 0 chr5 118576104 118576126 -84509406 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 118577710 118577737 -84507795 + (TG)n Simple_repeat Simple_repeat 2 28 0 891 232 79 37 chr5 118577882 118578123 -84507409 - MIR SINE MIR -11 251 1 27 0 0 0 chr5 118578506 118578533 -84506999 + AT_rich Low_complexity Low_complexity 1 27 0 997 211 88 20 chr5 118578872 118579166 -84506366 + MLT1C LTR MaLR 1 314 -153 1756 164 6 57 chr5 118579201 118579519 -84506013 + AluJo SINE Alu 2 303 -9 758 123 19 19 chr5 118579532 118579686 -84505846 + GA-rich Low_complexity Low_complexity 4 157 0 662 176 0 8 chr5 118579715 118579834 -84505698 + MLT1C LTR MaLR 272 389 -1 47 53 0 0 chr5 118579896 118579971 -84505561 + AT_rich Low_complexity Low_complexity 1 75 0 1922 122 44 0 chr5 118580216 118580510 -84505022 - AluSx SINE Alu 0 312 5 22 56 0 0 chr5 118582654 118582690 -84502842 + AT_rich Low_complexity Low_complexity 1 36 0 31 0 0 0 chr5 118584179 118584210 -84501322 + AT_rich Low_complexity Low_complexity 1 31 0 655 281 146 21 chr5 118586274 118586659 -84498873 - MLT1J2 LTR MaLR -11 439 7 717 312 58 19 chr5 118587187 118587498 -84498034 - LTR16C LTR ERVL 0 491 169 328 244 186 0 chr5 118588563 118588714 -84496818 - MLT1J2 LTR MaLR -238 212 34 1099 219 46 17 chr5 118590194 118590431 -84495101 - MIR SINE MIR 0 262 19 250 220 11 11 chr5 118591005 118591096 -84494436 + (TA)n Simple_repeat Simple_repeat 1 91 0 1820 204 55 20 chr5 118592116 118592567 -84492965 - MLT1C LTR MaLR 0 467 1 405 277 42 8 chr5 118593681 118593800 -84491732 - L2 LINE L2 -11 3302 3180 2280 60 0 0 chr5 118593953 118594237 -84491295 - L1PA7 LINE L1 -7 6147 5864 2639 57 3 3 chr5 118594237 118594589 -84490943 + L1PA7 LINE L1 5522 5873 -281 21 71 0 0 chr5 118594700 118594742 -84490790 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr5 118594938 118594981 -84490551 + AT_rich Low_complexity Low_complexity 1 43 0 246 274 43 60 chr5 118596028 118596145 -84489387 + L2 LINE L2 2777 2891 -423 233 270 111 16 chr5 118596407 118596533 -84488999 - MLT1K LTR MaLR -8 580 443 273 399 0 14 chr5 118596671 118596809 -84488723 - MLT1K LTR MaLR -376 212 77 454 296 196 14 chr5 118597584 118597804 -84487728 + MIR SINE MIR 3 262 0 200 188 0 0 chr5 118597815 118597847 -84487685 + polypyrimidine Low_complexity Low_complexity 2 33 0 237 313 38 38 chr5 118598905 118599036 -84486496 - L2 LINE L2 -6 3307 3177 25 0 0 0 chr5 118601024 118601049 -84484483 + AT_rich Low_complexity Low_complexity 1 25 0 495 278 90 26 chr5 118604053 118604319 -84481213 - MLT1K LTR MaLR -3 585 303 1147 189 44 30 chr5 118604337 118604633 -84480899 + L1MA7 LINE L1 5989 6288 -3 506 309 44 50 chr5 118604644 118604942 -84480590 - MLT1K LTR MaLR -290 298 3 2189 231 42 46 chr5 118605262 118605526 -84480006 - L1M4c LINE L1 -4796 2163 1899 2078 118 26 29 chr5 118605526 118605839 -84479693 - AluSx SINE Alu 0 312 1 2189 231 42 46 chr5 118605839 118606549 -84478983 - L1M4c LINE L1 -5060 1899 1190 5408 153 27 44 chr5 118607050 118608140 -84477392 - MER11C LTR ERVK 0 1071 1 2248 244 95 62 chr5 118608198 118609095 -84476437 - L1M4c LINE L1 -5923 936 11 1073 258 76 49 chr5 118609158 118609526 -84476006 - L3b LINE CR1 -29 1554 1177 6161 143 23 5 chr5 118609537 118610234 -84475298 - L1MA3 LINE L1 -1 7723 7040 369 0 0 0 chr5 118610234 118610275 -84475257 + (TG)n Simple_repeat Simple_repeat 2 42 0 6161 143 23 5 chr5 118610275 118611489 -84474043 - L1MA3 LINE L1 -684 7040 5774 * 13880 153 43 2 chr5 118611482 118613215 -84472317 - L1MA3 LINE L1 -5063 2502 644 411 21 0 0 chr5 118613215 118613263 -84472269 + (TCTCC)n Simple_repeat Simple_repeat 4 51 0 13880 153 43 2 chr5 118613263 118613922 -84471610 - L1MA3 LINE L1 -6921 644 13 341 354 34 11 chr5 118614014 118614189 -84471343 + MER5A DNA MER1_type 7 185 -4 725 204 19 12 chr5 118614235 118614397 -84471135 + MER5B DNA MER1_type 13 175 -3 2133 111 0 44 chr5 118615175 118615490 -84470042 - AluSg SINE Alu -9 301 1 222 279 0 16 chr5 118615732 118615793 -84469739 + L2 LINE L2 3203 3262 -10 395 148 103 19 chr5 118616237 118616392 -84469140 + (TTATA)n Simple_repeat Simple_repeat 3 170 0 249 129 65 0 chr5 118616396 118616489 -84469043 + (TA)n Simple_repeat Simple_repeat 2 100 0 815 254 92 45 chr5 118616846 118617335 -84468197 - MER113 DNA MER1_type? -3 518 7 451 325 175 0 chr5 118618699 118618865 -84466667 - MER91A DNA MER1_type -1 195 1 414 291 97 66 chr5 118621282 118621632 -84463900 - MLT1J LTR MaLR -1 510 150 2203 101 0 26 chr5 118621678 118621986 -84463546 - AluSx SINE Alu -12 300 1 227 365 32 16 chr5 118623011 118623137 -84462395 + MIR SINE MIR 15 142 -120 24 0 0 0 chr5 118623390 118623414 -84462118 + AT_rich Low_complexity Low_complexity 1 24 0 1906 155 17 0 chr5 118623444 118623741 -84461791 + AluSx SINE Alu 1 302 -10 772 273 90 50 chr5 118624138 118624618 -84460914 + MARNA DNA Mariner 15 513 -73 315 348 149 20 chr5 118624939 118625140 -84460392 - MIR SINE MIR -15 247 21 372 43 0 0 chr5 118625301 118625347 -84460185 + (T)n Simple_repeat Simple_repeat 1 46 0 499 250 24 8 chr5 118627623 118627747 -84457785 + L2 LINE L2 3188 3313 0 22 0 0 0 chr5 118628739 118628761 -84456771 + AT_rich Low_complexity Low_complexity 1 22 0 258 333 0 85 chr5 118630687 118630828 -84454704 + L2 LINE L2 3142 3270 -2 21 0 0 0 chr5 118632521 118632542 -84452990 + AT_rich Low_complexity Low_complexity 1 21 0 183 273 18 18 chr5 118632585 118632640 -84452892 - MIR3 SINE MIR -144 64 10 2160 103 7 3 chr5 118633115 118633406 -84452126 + AluSx SINE Alu 1 292 -20 200 205 0 0 chr5 118636674 118636713 -84448819 + (ATG)n Simple_repeat Simple_repeat 1 39 0 410 212 24 0 chr5 118637106 118637191 -84448341 - MIR3 SINE MIR -49 159 73 333 0 0 0 chr5 118641143 118641180 -84444352 + (A)n Simple_repeat Simple_repeat 1 37 0 22 56 0 0 chr5 118643115 118643151 -84442381 + AT_rich Low_complexity Low_complexity 1 36 0 1596 206 11 0 chr5 118643151 118643438 -84442094 - AluJo SINE Alu -22 290 1 1563 217 3 10 chr5 118645382 118645677 -84439855 - AluJo SINE Alu -14 298 6 256 316 40 0 chr5 118646353 118646429 -84439103 + MIR SINE MIR 30 108 -100 207 0 0 0 chr5 118646917 118646940 -84438592 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 118647477 118647499 -84438033 + AT_rich Low_complexity Low_complexity 1 22 0 199 77 26 26 chr5 118648142 118648181 -84437351 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr5 118649630 118649653 -84435879 + AT_rich Low_complexity Low_complexity 1 23 0 268 183 37 12 chr5 118651431 118651513 -84434019 + (TA)n Simple_repeat Simple_repeat 1 84 0 234 337 21 42 chr5 118651630 118651644 -84433888 - L2 LINE L2 -15 3257 3244 1945 161 3 0 chr5 118651644 118651948 -84433584 + AluSx SINE Alu 1 305 -7 234 337 21 42 chr5 118651948 118652028 -84433504 - L2 LINE L2 -28 3244 3165 1098 207 158 73 chr5 118652927 118653434 -84432098 + MLT1E LTR MaLR 1 544 -23 2243 127 0 0 chr5 118655799 118656106 -84429426 - AluSx SINE Alu -5 307 1 184 307 0 27 chr5 118657016 118657091 -84428441 + MIR SINE MIR 60 133 -75 885 142 14 0 chr5 118657892 118658033 -84427499 + FRAM SINE Alu 20 162 -14 2180 114 0 0 chr5 118658035 118658325 -84427207 + AluSg1 SINE Alu 1 290 -19 599 154 0 0 chr5 118658795 118658899 -84426633 - AluJb SINE Alu -7 305 202 186 364 35 77 chr5 118659158 118659301 -84426231 + L2 LINE L2 3128 3264 -8 1744 173 10 35 chr5 118659331 118659643 -84425889 + AluJb SINE Alu 1 304 -8 949 89 0 8 chr5 118659936 118660060 -84425472 + AluSq/x SINE Alu 1 123 -189 485 177 46 0 chr5 118660073 118660203 -84425329 + GA-rich Low_complexity Low_complexity 4 139 0 25 0 0 0 chr5 118660802 118660827 -84424705 + AT_rich Low_complexity Low_complexity 1 25 0 570 283 115 28 chr5 118661155 118661441 -84424091 + L2 LINE L2 3001 3311 -2 597 287 79 14 chr5 118665246 118665462 -84420070 - MIR SINE MIR -1 261 32 574 203 8 8 chr5 118666433 118666551 -84418981 + L2 LINE L2 2680 2797 -517 581 222 17 17 chr5 118666605 118666785 -84418747 + (TA)n Simple_repeat Simple_repeat 1 180 0 572 227 28 6 chr5 118666802 118666978 -84418554 + (TA)n Simple_repeat Simple_repeat 1 180 0 424 81 0 40 chr5 118667009 118667083 -84418449 + MADE1 DNA Mariner 10 80 0 800 245 41 139 chr5 118667108 118667574 -84417958 + L2 LINE L2 2851 3270 -43 284 261 0 91 chr5 118668166 118668254 -84417278 - MIR3 SINE MIR -42 166 87 225 0 0 0 chr5 118668955 118668980 -84416552 + (CACCAT)n Simple_repeat Simple_repeat 3 27 0 2195 62 4 11 chr5 118670784 118671056 -84414476 - AluY SINE Alu -3 308 39 337 259 9 18 chr5 118671329 118671441 -84414091 - MER103 DNA DNA -1 165 55 292 257 88 26 chr5 118671530 118671643 -84413889 - MIR3 SINE MIR -48 160 41 418 169 0 0 chr5 118672407 118672484 -84413048 - AluJo SINE Alu -11 301 225 636 221 107 7 chr5 118672488 118672637 -84412895 - AluJo SINE Alu -148 164 1 234 345 95 0 chr5 118673844 118673960 -84411572 - MIR SINE MIR -63 145 19 246 317 96 36 chr5 118674839 118675006 -84410526 + MER5A DNA MER1_type 6 182 -7 214 275 43 43 chr5 118675179 118675248 -84410284 + L2 LINE L2 3141 3209 -63 599 339 63 17 chr5 118675759 118675998 -84409534 + MIR SINE MIR 11 260 -2 859 237 72 1 chr5 118677118 118677347 -84408185 + MIR SINE MIR 8 252 -10 596 217 14 29 chr5 118681150 118681288 -84404244 - MIR SINE MIR -109 153 18 300 53 0 0 chr5 118681288 118681326 -84404206 + (A)n Simple_repeat Simple_repeat 1 38 0 2317 101 3 0 chr5 118682548 118682854 -84402678 - AluSp SINE Alu -6 307 1 432 242 33 8 chr5 118682887 118683007 -84402525 + MIR SINE MIR 59 181 -81 592 254 78 53 chr5 118683053 118683556 -84401976 - L2 LINE L2 -18 3295 2728 423 344 43 6 chr5 118683827 118683990 -84401542 - MIR3 SINE MIR -2 206 38 698 224 0 0 chr5 118684188 118684304 -84401228 - FLAM_A SINE Alu -17 116 1 2232 98 0 35 chr5 118684962 118685279 -84400253 - AluSg SINE Alu -4 306 1 239 309 140 15 chr5 118686846 118686982 -84398550 + L2 LINE L2 3119 3271 -1 481 217 172 6 chr5 118687102 118687257 -84398275 + MER5A DNA MER1_type 4 188 -1 23 0 0 0 chr5 118688523 118688546 -84396986 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 118688612 118688656 -84396876 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 118688679 118688724 -84396808 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1096 262 84 39 chr5 118689486 118689868 -84395664 - L3 LINE CR1 -108 1469 1071 2127 128 0 10 chr5 118689924 118690230 -84395302 + AluSx SINE Alu 1 303 -9 266 284 108 7 chr5 118690306 118690445 -84395087 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 118690545 118690586 -84394946 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 118691108 118691142 -84394390 + AT_rich Low_complexity Low_complexity 1 34 0 2348 101 3 0 chr5 118691529 118691836 -84393696 - AluSc SINE Alu -1 308 1 280 98 20 20 chr5 118692075 118692126 -84393406 - HSMAR1 DNA Mariner 0 1287 1237 581 276 49 39 chr5 118692219 118692422 -84393110 - MIR SINE MIR -57 205 1 504 244 84 66 chr5 118692549 118692762 -84392770 - MIR SINE MIR -36 226 10 2493 147 26 5 chr5 118693541 118693964 -84391568 + Tigger2a DNA MER2_type 2 433 -1 1991 145 3 20 chr5 118694377 118694680 -84390852 + AluJb SINE Alu 2 299 -13 198 0 0 0 chr5 118696078 118696100 -84389432 + (T)n Simple_repeat Simple_repeat 1 22 0 321 313 61 0 chr5 118698361 118698460 -84387072 + L2 LINE L2 3159 3263 -9 1433 191 58 36 chr5 118699807 118700169 -84385363 + MLT1A2 LTR MaLR 1 370 -4 216 0 0 0 chr5 118703692 118703716 -84381816 + (A)n Simple_repeat Simple_repeat 1 24 0 1932 100 0 0 chr5 118704385 118704656 -84380876 + L1PA8 LINE L1 5902 6172 0 2021 149 0 0 chr5 118705799 118706088 -84379444 - AluSx SINE Alu -23 289 1 653 258 26 86 chr5 118706745 118707013 -84378519 + MIR SINE MIR 1 252 -10 2125 97 26 26 chr5 118707233 118707544 -84377988 + AluY SINE Alu 1 311 0 396 258 47 16 chr5 118708183 118708311 -84377221 - L2 LINE L2 -4 3309 3178 1290 120 0 0 chr5 118708601 118708785 -84376747 - AluSg SINE Alu 0 309 126 562 93 0 0 chr5 118708786 118708861 -84376671 - AluSg SINE Alu -243 75 1 400 343 0 0 chr5 118708877 118709014 -84376518 - L2 LINE L2 -575 2739 2603 199 299 92 11 chr5 118709088 118709175 -84376357 - L2 LINE L2 0 3313 3220 2260 99 0 17 chr5 118709314 118709669 -84375863 + AluSg SINE Alu 1 310 0 270 194 0 0 chr5 118712370 118712432 -84373100 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4433 70 20 2 chr5 118712491 118713103 -84372429 + L1PA8A LINE L1 5482 6104 -27 1786 153 7 27 chr5 118713219 118713514 -84372018 + AluJb SINE Alu 1 289 -23 297 51 0 0 chr5 118714718 118714757 -84370775 + (TG)n Simple_repeat Simple_repeat 1 39 0 1758 137 43 0 chr5 118718131 118718431 -84367101 + MER2 DNA MER2_type 33 345 0 356 211 100 0 chr5 118718480 118718570 -84366962 + L1MC2 LINE L1 6217 6315 -29 468 320 82 5 chr5 118718647 118718841 -84366691 - MIR SINE MIR -53 209 1 328 365 189 32 chr5 118719018 118719330 -84366202 - L2 LINE L2 -2 3270 2910 704 100 0 52 chr5 118719901 118720172 -84365360 + AluSx SINE Alu 13 310 0 471 320 39 6 chr5 118720201 118720379 -84365153 - MIR3 SINE MIR 0 208 25 223 217 29 29 chr5 118723031 118723100 -84362432 + A-rich Low_complexity Low_complexity 4 72 0 404 308 28 21 chr5 118723705 118723848 -84361684 + MIR3 SINE MIR 19 162 -46 643 234 52 16 chr5 118728025 118728217 -84357315 - MER113 DNA MER1_type? -54 467 269 406 220 43 14 chr5 118728273 118728414 -84357118 - MER113 DNA MER1_type? -371 150 6 787 232 0 6 chr5 118729839 118730003 -84355529 - MER45A DNA AcHobo -15 163 1 585 116 0 21 chr5 118731569 118731664 -84353868 + FLAM_C SINE Alu 44 136 -7 2215 107 7 3 chr5 118734436 118734735 -84350797 - AluSq SINE Alu -13 300 1 439 310 59 20 chr5 118734806 118735009 -84350523 + Charlie8 DNA MER1_type 4 214 -2203 996 92 0 0 chr5 118736823 118736964 -84348568 + (TA)n Simple_repeat Simple_repeat 1 141 0 2328 92 0 3 chr5 118736964 118737259 -84348273 - AluSq SINE Alu -19 294 1 339 25 0 0 chr5 118737636 118737676 -84347856 + (TC)n Simple_repeat Simple_repeat 1 40 0 345 258 88 4 chr5 118740646 118740799 -84344733 - MIR SINE MIR -30 232 1 221 223 165 39 chr5 118741409 118741512 -84344020 - L2 LINE L2 -15 3298 3183 419 241 0 0 chr5 118741928 118742015 -84343517 - L2 LINE L2 -7 3306 3220 2109 133 3 3 chr5 118742489 118742791 -84342741 + AluSg SINE Alu 2 303 -7 1874 163 17 14 chr5 118742946 118743241 -84342291 + AluSx SINE Alu 1 296 -16 516 56 0 0 chr5 118743714 118743786 -84341746 + (TC)n Simple_repeat Simple_repeat 2 73 0 275 132 38 0 chr5 118743788 118743841 -84341691 + (CATA)n Simple_repeat Simple_repeat 2 56 0 335 235 59 12 chr5 118745514 118745599 -84339933 + MIR SINE MIR 19 107 -155 218 341 0 39 chr5 118745820 118746002 -84339530 + A-rich Low_complexity Low_complexity 1 175 0 180 111 0 0 chr5 118746381 118746408 -84339124 + (TC)n Simple_repeat Simple_repeat 2 28 0 244 267 242 17 chr5 118747440 118747560 -84337972 + MLT1I LTR MaLR 20 166 -243 298 234 0 0 chr5 118747682 118747746 -84337786 + MLT1I LTR MaLR 346 409 0 279 268 148 77 chr5 118748205 118748388 -84337144 + L2 LINE L2 3077 3272 0 421 267 82 30 chr5 118748636 118748771 -84336761 + L2 LINE L2 3123 3264 -8 1993 123 3 7 chr5 118749608 118749900 -84335632 - AluSg SINE Alu -19 291 1 2026 137 10 0 chr5 118750087 118750380 -84335152 - AluSx SINE Alu -16 296 1 2480 186 21 13 chr5 118750686 118751154 -84334378 + MER70A LTR ERVL 1 472 0 552 239 0 0 chr5 118751161 118751306 -84334226 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 118752213 118752243 -84333289 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2155 101 4 0 chr5 118752243 118752520 -84333012 - AluSq SINE Alu -33 280 3 21 26 0 26 chr5 118752737 118752756 -84332776 + AT_rich Low_complexity Low_complexity 1 19 -19 2116 117 0 7 chr5 118752756 118753046 -84332486 - AluSx SINE Alu -24 288 1 21 26 0 26 chr5 118753046 118753065 -84332467 + AT_rich Low_complexity Low_complexity 19 38 0 2251 79 21 0 chr5 118753628 118753919 -84331613 + AluSx SINE Alu 1 297 -15 189 0 0 0 chr5 118754446 118754467 -84331065 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 667 232 77 0 chr5 118754729 118754897 -84330635 - MIR SINE MIR -71 191 11 3292 138 102 93 chr5 118754976 118756429 -84329103 + pTR5 LTR ERV1 66 2438 0 2135 94 28 60 chr5 118756960 118757278 -84328254 + AluSq SINE Alu 6 313 0 1608 164 28 104 chr5 118758582 118758839 -84326693 - MER45B DNA AcHobo -543 1038 832 2279 97 0 0 chr5 118758839 118759127 -84326405 - AluSx SINE Alu -24 288 1 1608 164 28 104 chr5 118759127 118759338 -84326194 - MER45B DNA AcHobo -749 832 606 1119 256 93 0 chr5 118759356 118759657 -84325875 - MER45B DNA AcHobo -711 329 1 459 35 0 0 chr5 118759856 118759913 -84325619 + (TATG)n Simple_repeat Simple_repeat 4 60 0 21 0 0 0 chr5 118762163 118762184 -84323348 + AT_rich Low_complexity Low_complexity 1 21 0 296 284 14 0 chr5 118765522 118765596 -84319936 + MIR SINE MIR 74 148 -60 213 267 0 0 chr5 118766603 118766648 -84318884 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 118766724 118766771 -84318761 + CT-rich Low_complexity Low_complexity 3 48 0 667 232 53 2 chr5 118766792 118766950 -84318582 - MIR SINE MIR -44 164 2 454 297 65 27 chr5 118768067 118768252 -84317280 - MIR3 SINE MIR -1 207 16 1304 153 23 23 chr5 118768479 118768695 -84316837 + AluJb SINE Alu 1 216 -96 418 167 127 40 chr5 118768695 118768821 -84316711 + Charlie5 DNA MER1_type 2486 2622 0 187 301 63 56 chr5 118768835 118768978 -84316554 - L2 LINE L2 -1321 1993 1850 2241 105 0 43 chr5 118770231 118770555 -84314977 - AluSg SINE Alu 0 310 1 429 328 8 8 chr5 118770641 118770763 -84314769 + L2 LINE L2 3189 3310 -3 3784 131 34 5 chr5 118770877 118771494 -84314038 + MER41B LTR ERV1 1 635 0 2219 97 3 7 chr5 118771911 118771927 -84313605 - AluSq SINE Alu -14 299 284 432 0 0 0 chr5 118771927 118771975 -84313557 + (TG)n Simple_repeat Simple_repeat 1 48 0 2219 97 3 7 chr5 118771975 118772257 -84313275 - AluSq SINE Alu -29 284 2 21 0 0 0 chr5 118772440 118772461 -84313071 + AT_rich Low_complexity Low_complexity 1 21 0 239 0 32 0 chr5 118773292 118773323 -84312209 + (CAA)n Simple_repeat Simple_repeat 2 33 0 228 67 0 0 chr5 118774182 118774212 -84311320 + (GA)n Simple_repeat Simple_repeat 1 30 0 530 169 22 88 chr5 118775631 118775767 -84309765 + L2 LINE L2 2731 2857 -457 1605 93 115 33 chr5 118775770 118776040 -84309492 + LTR9 LTR ERV1 1 292 -320 1667 97 4 13 chr5 118776040 118776268 -84309264 - AluSx SINE Alu -85 227 2 2020 124 7 0 chr5 118776280 118776606 -84308926 - AluSx SINE Alu 0 312 2 1595 195 10 0 chr5 118776937 118777104 -84308428 - AluJb SINE Alu -15 297 124 441 0 0 0 chr5 118777104 118777153 -84308379 + (TG)n Simple_repeat Simple_repeat 2 50 0 1595 195 10 0 chr5 118777153 118777277 -84308255 - AluJb SINE Alu -188 124 3 1117 243 47 4 chr5 118777750 118778107 -84307425 + L1MB7 LINE L1 5812 6184 0 707 214 130 16 chr5 118778287 118778479 -84307053 + MIR SINE MIR 9 222 -40 21 71 0 0 chr5 118780694 118780736 -84304796 + AT_rich Low_complexity Low_complexity 1 42 0 1956 158 2 87 chr5 118781999 118782230 -84303302 - MER47B DNA MER2_type -1905 418 240 1729 125 0 77 chr5 118782230 118782541 -84302991 - AluJo SINE Alu -15 297 11 1956 158 2 87 chr5 118782541 118782745 -84302787 - MER47B DNA MER2_type -2083 240 20 681 184 60 30 chr5 118782763 118782931 -84302601 - FAM SINE Alu -2 173 1 1214 205 66 50 chr5 118783329 118783631 -84301901 - AluJo SINE Alu -5 307 1 286 276 101 83 chr5 118785966 118786194 -84299338 + MIR SINE MIR 1 232 -30 243 221 29 15 chr5 118786211 118786279 -84299253 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 2268 133 30 12 chr5 118786373 118786778 -84298754 - Tigger2 DNA MER2_type -40 2678 2267 296 191 29 29 chr5 118786762 118786830 -84298702 - Tigger2 DNA MER2_type -2649 69 2 * 2309 113 0 7 chr5 118788216 118788526 -84297006 - AluSg SINE Alu -2 308 1 215 253 35 103 chr5 118789066 118789153 -84296379 + MIR SINE MIR 118 198 -64 27 0 0 0 chr5 118789689 118789716 -84295816 + AT_rich Low_complexity Low_complexity 1 27 0 333 211 11 111 chr5 118789844 118790024 -84295508 - MER112 DNA MER1_type -97 163 2 232 312 55 28 chr5 118790161 118790270 -84295262 - MIR3 SINE MIR -8 200 89 1379 278 20 10 chr5 118791019 118791418 -84294114 - MLT1I LTR MaLR -6 403 1 450 326 47 16 chr5 118791581 118791805 -84293727 + MIR SINE MIR 17 248 -14 980 309 78 36 chr5 118791999 118792526 -84293006 + L3 LINE CR1 795 1343 -234 247 298 21 43 chr5 118797248 118797342 -84288190 + MER5B DNA MER1_type 87 178 0 2199 112 3 0 chr5 118797766 118798062 -84287470 + AluSg SINE Alu 1 297 -13 1110 123 7 0 chr5 118798152 118798298 -84287234 + AluSq/x SINE Alu 1 147 -165 1762 143 8 0 chr5 118798298 118798557 -84286975 + AluSq SINE Alu 40 300 -13 368 301 96 7 chr5 118798557 118798703 -84286829 - MIR SINE MIR -53 209 51 202 319 0 0 chr5 118799270 118799317 -84286215 - L2 LINE L2 -9 3263 3217 727 132 0 0 chr5 118800418 118800524 -84285008 - AluSg/x SINE Alu -31 281 176 2022 100 0 25 chr5 118800424 118800704 -84284828 - AluSg SINE Alu -37 273 1 285 227 61 55 chr5 118801579 118801742 -84283790 + L1ME LINE L1 5521 5684 -437 2048 120 30 0 chr5 118801776 118802075 -84283457 + AluSg SINE Alu 1 308 -2 28 29 0 0 chr5 118802133 118802168 -84283364 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr5 118803913 118803936 -84281596 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 180 325 39 26 chr5 118805712 118805789 -84279743 + L2 LINE L2 3186 3263 -9 360 0 0 0 chr5 118807588 118807628 -84277904 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr5 118807650 118807672 -84277860 + AT_rich Low_complexity Low_complexity 1 22 0 292 323 97 0 chr5 118809003 118809144 -84276388 - MIR3 SINE MIR -27 181 28 276 300 117 25 chr5 118810293 118810413 -84275119 - MIR SINE MIR -65 197 67 336 352 47 0 chr5 118811391 118811519 -84274013 + MIR SINE MIR 71 204 -58 709 221 31 79 chr5 118811953 118812207 -84273325 - MIR SINE MIR 0 262 21 334 208 39 13 chr5 118812211 118812288 -84273244 - MER58B DNA MER1_type 0 341 263 279 240 60 60 chr5 118812374 118812474 -84273058 - MIR SINE MIR -54 208 109 741 254 95 17 chr5 118813248 118813480 -84272052 - MIR SINE MIR 0 262 13 447 313 22 0 chr5 118815676 118815810 -84269722 - MIR SINE MIR -86 176 40 262 270 22 22 chr5 118817181 118817270 -84268262 - MIR SINE MIR -11 251 163 2079 129 0 0 chr5 118817404 118817691 -84267841 + AluSq SINE Alu 1 287 -26 445 16 0 31 chr5 118817694 118817758 -84267774 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 411 262 43 85 chr5 118818072 118818213 -84267319 + L2 LINE L2 3132 3266 -6 366 195 73 49 chr5 118818802 118818925 -84266607 + MIR SINE MIR 137 262 0 279 310 60 0 chr5 118818979 118819079 -84266453 - MIR SINE MIR -73 135 30 328 272 39 0 chr5 118821458 118821561 -84263971 + MIR3 SINE MIR 53 159 -49 2221 110 0 3 chr5 118822227 118822519 -84263013 - AluSg SINE Alu -19 291 1 183 100 0 0 chr5 118823195 118823225 -84262307 + (TC)n Simple_repeat Simple_repeat 1 30 0 1674 172 6 38 chr5 118824255 118824594 -84260938 - AluJo SINE Alu 0 312 1 214 357 10 20 chr5 118824621 118824719 -84260813 + L2 LINE L2 2578 2674 -640 231 114 0 0 chr5 118825462 118825506 -84260026 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 1867 162 6 16 chr5 118828738 118829053 -84256479 - AluJo SINE Alu 0 312 1 993 138 0 0 chr5 118830211 118830463 -84255069 + (TA)n Simple_repeat Simple_repeat 1 252 0 1733 114 68 8 chr5 118830463 118830727 -84254805 + AluSx SINE Alu 29 308 -4 219 234 16 78 chr5 118836518 118836582 -84248950 - L2 LINE L2 -70 3202 3143 21 36 0 0 chr5 118839755 118839783 -84245749 + AT_rich Low_complexity Low_complexity 1 28 0 402 222 17 34 chr5 118839797 118839914 -84245618 - ORSL DNA AcHobo -160 115 1 253 359 11 0 chr5 118839967 118840059 -84245473 - MIR SINE MIR -70 192 100 294 308 7 14 chr5 118840068 118840176 -84245356 + MIR SINE MIR 16 124 -84 2344 59 7 0 chr5 118841326 118841613 -84243919 + AluY SINE Alu 22 310 -1 184 327 36 0 chr5 118842109 118842164 -84243368 - L3b LINE CR1 -8 1575 1519 180 273 15 61 chr5 118843090 118843156 -84242376 + L2 LINE L2 3210 3272 0 258 200 0 0 chr5 118845615 118845660 -84239872 + L2 LINE L2 3268 3312 -1 2439 73 0 3 chr5 118848378 118848680 -84236852 - AluY SINE Alu -10 301 1 1808 155 10 14 chr5 118851259 118851555 -84233977 - AluJb SINE Alu -17 295 1 530 233 85 94 chr5 118852017 118852348 -84233184 + MER102a DNA MER1_type 1 328 -2 2073 108 7 0 chr5 118852403 118852690 -84232842 + AluSx SINE Alu 1 289 -23 668 62 105 0 chr5 118852690 118852966 -84232566 + (TA)n Simple_repeat Simple_repeat 1 305 0 484 275 62 6 chr5 118854358 118854518 -84231014 + MER5B DNA MER1_type 1 169 -9 22 0 0 0 chr5 118856329 118856351 -84229181 + AT_rich Low_complexity Low_complexity 1 22 0 438 266 58 19 chr5 118856530 118856684 -84228848 + MIR SINE MIR 13 172 -90 2272 162 84 9 chr5 118856965 118857429 -84228103 - L1MB2 LINE L1 -2 6169 5671 22 35 0 0 chr5 118857444 118857473 -84228059 + AT_rich Low_complexity Low_complexity 1 29 0 419 262 40 16 chr5 118857767 118857913 -84227619 + MIR SINE MIR 30 177 -62 323 283 88 44 chr5 118858949 118859108 -84226424 - MIR SINE MIR -3 259 94 1070 243 128 24 chr5 118859970 118860431 -84225101 + L1MC4a LINE L1 5665 6173 -1635 193 306 111 0 chr5 118860945 118861017 -84224515 - L2 LINE L2 -238 3075 2996 2076 132 0 3 chr5 118861319 118861622 -84223910 - AluSx SINE Alu -10 302 1 202 328 0 0 chr5 118862511 118862569 -84222963 - MIR SINE MIR -17 245 188 789 171 6 38 chr5 118865012 118865170 -84220362 - AluJb SINE Alu -11 301 149 195 260 68 27 chr5 118865577 118865650 -84219882 - MER5B DNA MER1_type -101 77 2 473 71 14 0 chr5 118867353 118867423 -84218109 + (CA)n Simple_repeat Simple_repeat 2 72 0 410 235 39 10 chr5 118867459 118867561 -84217971 + MIR SINE MIR 69 173 -89 21 82 0 0 chr5 118873313 118873362 -84212170 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 118877386 118877410 -84208122 + AT_rich Low_complexity Low_complexity 1 24 0 264 100 0 0 chr5 118877429 118877469 -84208063 + (TG)n Simple_repeat Simple_repeat 2 41 0 285 29 0 0 chr5 118878044 118878078 -84207454 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 330 26 0 0 chr5 118878077 118878116 -84207416 + (GA)n Simple_repeat Simple_repeat 2 40 0 260 313 38 61 chr5 118878178 118878309 -84207223 - L2 LINE L2 -3 3310 3183 427 252 0 44 chr5 118878721 118878856 -84206676 + FLAM_A SINE Alu 1 129 -4 245 188 0 0 chr5 118878907 118878955 -84206577 - L2 LINE L2 0 3272 3225 2432 63 0 13 chr5 118879764 118880066 -84205466 - AluY SINE Alu -13 298 1 2152 114 7 10 chr5 118880305 118880603 -84204929 - AluSg SINE Alu -13 297 1 302 279 149 32 chr5 118882388 118882542 -84202990 + MIR SINE MIR 21 192 -70 450 323 0 15 chr5 118882976 118883109 -84202423 + MLT1J LTR MaLR 209 339 -172 416 273 52 70 chr5 118883123 118883295 -84202237 - MER5B DNA MER1_type -3 175 7 230 345 18 48 chr5 118883381 118883549 -84201983 - MIR SINE MIR 0 262 100 2903 16 0 0 chr5 118883579 118883897 -84201635 + AluYb8 SINE Alu 1 318 0 23 0 0 0 chr5 118885717 118885740 -84199792 + AT_rich Low_complexity Low_complexity 1 23 0 1509 187 19 41 chr5 118887103 118887418 -84198114 - AluJo SINE Alu -4 308 1 1157 128 0 0 chr5 118888330 118888494 -84197038 + FRAM SINE Alu 3 166 0 710 293 0 5 chr5 118888846 118889034 -84196498 - MIR SINE MIR 0 262 76 21 0 0 0 chr5 118890051 118890072 -84195460 + AT_rich Low_complexity Low_complexity 1 21 0 1996 128 7 3 chr5 118890209 118890515 -84195017 + L1MC1 LINE L1 6016 6322 -11 1412 110 32 23 chr5 118890515 118890612 -84194920 - MER30 DNA MER1_type -6 224 129 2072 132 3 0 chr5 118890612 118890916 -84194616 + AluSx SINE Alu 1 305 -7 1412 110 32 23 chr5 118890916 118891037 -84194495 - MER30 DNA MER1_type -101 129 4 5691 129 38 2 chr5 118891066 118891990 -84193542 - Tigger3b DNA MER2_type -1 1230 274 573 196 0 10 chr5 118891988 118892090 -84193442 - Tigger3b DNA MER2_type -1129 102 2 * 345 24 0 0 chr5 118892090 118892132 -84193400 + (CA)n Simple_repeat Simple_repeat 2 43 0 259 216 10 10 chr5 118892164 118892261 -84193271 + (TA)n Simple_repeat Simple_repeat 2 98 0 262 304 5 43 chr5 118892950 118893134 -84192398 + CT-rich Low_complexity Low_complexity 1 177 0 1559 189 7 3 chr5 118895084 118895369 -84190163 + AluJo SINE Alu 11 296 -16 381 22 0 0 chr5 118898338 118898384 -84187148 + (TG)n Simple_repeat Simple_repeat 1 46 0 273 239 52 13 chr5 118898465 118898620 -84186912 + (TA)n Simple_repeat Simple_repeat 1 161 0 279 0 0 0 chr5 118898679 118898710 -84186822 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2250 66 0 28 chr5 118898712 118898999 -84186533 - AluY SINE Alu -32 279 1 1102 147 32 28 chr5 118899096 118899314 -84186218 + L1MA8 LINE L1 5893 6111 -180 1203 161 5 28 chr5 118899408 118899619 -84185913 - MER2 DNA MER2_type -139 206 1 860 129 59 0 chr5 118899619 118899664 -84185868 + L1MA8 LINE L1 6110 6151 -140 234 91 0 0 chr5 118899664 118899697 -84185835 + (CA)n Simple_repeat Simple_repeat 2 34 0 860 129 59 0 chr5 118899697 118899821 -84185711 + L1MA8 LINE L1 6151 6289 -2 905 251 33 23 chr5 118900164 118900411 -84185121 + MIR SINE MIR 1 241 -21 648 120 0 0 chr5 118901803 118901903 -84183629 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 2145 105 10 10 chr5 118901926 118902221 -84183311 + AluSx SINE Alu 1 295 -17 27 62 0 0 chr5 118902537 118902585 -84182947 + AT_rich Low_complexity Low_complexity 1 48 0 1598 121 61 7 chr5 118903024 118903321 -84182211 + L1MA8 LINE L1 5979 6291 0 270 0 0 0 chr5 118904721 118904751 -84180781 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2148 129 10 0 chr5 118905543 118905852 -84179680 - AluSx SINE Alu 0 312 1 909 81 32 0 chr5 118905867 118905990 -84179542 - L1PA10 LINE L1 -15 6153 6027 396 161 0 12 chr5 118907020 118907101 -84178431 + L1MA9 LINE L1 6057 6136 -176 181 320 0 20 chr5 118907262 118907312 -84178220 - L2 LINE L2 -15 3257 3209 23 0 0 0 chr5 118909083 118909106 -84176426 + AT_rich Low_complexity Low_complexity 1 23 0 454 271 60 26 chr5 118909833 118909984 -84175548 - MIR3 SINE MIR -13 195 40 302 314 50 0 chr5 118909998 118910119 -84175413 - MIR3 SINE MIR -37 171 45 776 278 49 25 chr5 118910598 118910843 -84174689 - MIR SINE MIR -2 260 10 283 302 57 0 chr5 118911511 118911617 -84173915 + L3b LINE CR1 1355 1466 -117 403 261 87 49 chr5 118912022 118912206 -84173326 + MIR SINE MIR 69 259 -3 636 109 20 10 chr5 118912853 118912954 -84172578 + L1MC1 LINE L1 6232 6333 0 27 81 0 0 chr5 118913718 118913780 -84171752 + AT_rich Low_complexity Low_complexity 1 62 0 257 226 54 65 chr5 118917554 118917647 -84167885 - MIR SINE MIR -59 203 112 22 35 0 0 chr5 118918476 118918505 -84167027 + AT_rich Low_complexity Low_complexity 1 29 0 510 234 171 38 chr5 118919549 118919707 -84165825 + MER5A DNA MER1_type 11 189 0 461 268 0 36 chr5 118919729 118919841 -84165691 + L2 LINE L2 3202 3309 -4 24 32 0 0 chr5 118919878 118919909 -84165623 + AT_rich Low_complexity Low_complexity 1 31 0 189 175 0 0 chr5 118920343 118920383 -84165149 + T-rich Low_complexity Low_complexity 1 40 0 288 0 0 0 chr5 118921114 118921146 -84164386 + (TA)n Simple_repeat Simple_repeat 2 33 0 225 154 0 0 chr5 118921945 118921984 -84163548 + A-rich Low_complexity Low_complexity 1 39 0 32 43 0 0 chr5 118922812 118922858 -84162674 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 118923616 118923638 -84161894 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 118924622 118924651 -84160881 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 118925804 118925830 -84159702 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 118926877 118926905 -84158627 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 118928505 118928527 -84157005 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 118930857 118930878 -84154654 + (A)n Simple_repeat Simple_repeat 1 21 0 25 75 0 0 chr5 118931815 118931868 -84153664 + GC_rich Low_complexity Low_complexity 1 53 0 207 0 0 0 chr5 118933330 118933353 -84152179 + (T)n Simple_repeat Simple_repeat 1 23 0 3316 142 42 20 chr5 118935797 118936389 -84149143 - MER6A DNA MER2_type 0 605 1 28 61 0 0 chr5 118936479 118936528 -84149004 + AT_rich Low_complexity Low_complexity 1 49 0 590 217 63 46 chr5 118936919 118936977 -84148555 - MER5B DNA MER1_type 0 178 122 180 0 0 0 chr5 118936977 118936997 -84148535 + (CAA)n Simple_repeat Simple_repeat 2 21 0 590 217 63 46 chr5 118936997 118937113 -84148419 - MER5B DNA MER1_type -56 122 1 21 0 0 0 chr5 118937567 118937588 -84147944 + AT_rich Low_complexity Low_complexity 1 21 0 1588 179 24 14 chr5 118938607 118938904 -84146628 + AluJo SINE Alu 6 305 -7 189 0 0 0 chr5 118939262 118939283 -84146249 + (CA)n Simple_repeat Simple_repeat 2 22 0 777 243 122 58 chr5 118940880 118940932 -84144600 + MLT1H LTR MaLR 57 104 -445 225 0 0 0 chr5 118940932 118940957 -84144575 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 777 243 122 58 chr5 118940957 118941282 -84144250 + MLT1H LTR MaLR 104 458 -91 186 43 0 0 chr5 118942238 118942261 -84143271 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 263 322 0 11 chr5 118942273 118942363 -84143169 + L2 LINE L2 3184 3272 0 547 333 83 40 chr5 118942798 118943403 -84142129 + L2 LINE L2 2623 3255 -17 186 43 0 0 chr5 118943407 118943430 -84142102 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 213 132 0 0 chr5 118943945 118943983 -84141549 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 306 326 97 7 chr5 118943997 118944141 -84141391 - L2 LINE L2 0 3272 3116 1439 281 51 32 chr5 118944492 118945041 -84140491 - L2 LINE L2 0 3313 2744 2186 123 0 10 chr5 118945041 118945342 -84140190 + AluSq SINE Alu 1 298 -15 1439 281 51 32 chr5 118945342 118945467 -84140065 - L2 LINE L2 -569 2744 2623 2026 154 0 0 chr5 118945612 118945923 -84139609 - AluSx SINE Alu -1 311 1 336 308 71 28 chr5 118946848 118947030 -84138502 + MIR SINE MIR 2 191 -71 949 207 0 9 chr5 118947325 118947536 -84137996 + MER33 DNA MER1_type 1 198 -99 1230 158 5 0 chr5 118947536 118947745 -84137787 + MER2 DNA MER2_type 1 210 -135 24 53 0 0 chr5 118947780 118947818 -84137714 + AT_rich Low_complexity Low_complexity 1 38 0 332 231 0 0 chr5 118947819 118947884 -84137648 + MER2 DNA MER2_type 281 345 0 486 152 30 61 chr5 118947884 118948016 -84137516 + MER33 DNA MER1_type 197 324 0 204 211 0 0 chr5 118948028 118948066 -84137466 + GA-rich Low_complexity Low_complexity 3 40 0 13762 154 39 26 chr5 118948087 118952047 -84133485 + L1MA3 LINE L1 12 3921 -3803 2245 103 3 16 chr5 118952047 118952359 -84133173 + AluY SINE Alu 1 308 -3 13762 154 39 26 chr5 118952359 118954145 -84131387 + L1MA3 LINE L1 3921 5683 -2041 2315 100 0 0 chr5 118954145 118954446 -84131086 + AluSg SINE Alu 3 303 -7 13762 154 39 26 chr5 118954446 118955433 -84130099 + L1MA3 LINE L1 5683 6656 -1068 2106 108 58 25 chr5 118955433 118955794 -84129738 - THE1C LTR MaLR -2 373 1 13762 154 39 26 chr5 118955794 118956281 -84129251 + L1MA3 LINE L1 6656 7714 -10 237 360 81 0 chr5 118956462 118956548 -84128984 - L2 LINE L2 -44 3228 3136 326 179 188 62 chr5 118958111 118958223 -84127309 - MER5B DNA MER1_type -17 161 36 602 226 8 0 chr5 118958392 118958525 -84127007 - MER94 DNA DNA 0 134 1 570 300 38 30 chr5 118959758 118959995 -84125537 - Charlie8 DNA MER1_type -2116 301 63 885 172 81 38 chr5 118960667 118960876 -84124656 - MER20 DNA MER1_type 0 219 2 1608 146 27 10 chr5 118961816 118962110 -84123422 + L1MC2 LINE L1 6046 6344 0 392 236 146 22 chr5 118963017 118963151 -84122381 + MIR SINE MIR 4 152 -56 245 303 92 66 chr5 118963508 118963660 -84121872 + MIR3 SINE MIR 31 186 -22 354 306 182 14 chr5 118964096 118964541 -84120991 + L1ME LINE L1 4633 5152 -994 321 313 161 5 chr5 118964539 118964750 -84120782 + L1ME LINE L1 5533 5776 -394 * 22 0 0 0 chr5 118965061 118965083 -84120449 + AT_rich Low_complexity Low_complexity 1 22 0 291 296 12 0 chr5 118966672 118966753 -84118779 + (CA)n Simple_repeat Simple_repeat 1 82 0 232 175 58 29 chr5 118966938 118967041 -84118491 + (TATAA)n Simple_repeat Simple_repeat 4 109 0 29 0 0 0 chr5 118967054 118967083 -84118449 + AT_rich Low_complexity Low_complexity 1 29 0 227 227 106 0 chr5 118967450 118967516 -84118016 - MIR3 SINE MIR -2 206 134 310 303 157 28 chr5 118967593 118967771 -84117761 + HAL1 LINE L1 10 210 -2297 573 312 102 0 chr5 118967771 118967976 -84117556 - MIR SINE MIR -1 261 36 305 242 76 96 chr5 118968157 118968355 -84117177 + HAL1 LINE L1 632 825 -1682 568 238 18 36 chr5 118968358 118968526 -84117006 - L1MCc LINE L1 -5026 1397 1233 * 1781 252 69 68 chr5 118968490 118969734 -84115798 + L1ME3A LINE L1 4927 6169 -1 22 35 0 0 chr5 118969995 118970024 -84115508 + AT_rich Low_complexity Low_complexity 1 29 0 1421 169 117 4 chr5 118970212 118970478 -84115054 - AluJb SINE Alu -5 297 2 231 251 10 0 chr5 118970556 118970659 -84114873 + L1MC4 LINE L1 2006 6981 -1341 544 238 0 12 chr5 118970666 118970826 -84114706 + (TA)n Simple_repeat Simple_repeat 1 158 0 238 214 0 0 chr5 118970838 118970894 -84114638 + L1MC4 LINE L1 6928 6983 -1339 227 225 14 0 chr5 118970900 118970971 -84114561 + (TA)n Simple_repeat Simple_repeat 2 73 0 1459 216 158 31 chr5 118970984 118971001 -84114531 - MLT2B1 LTR ERVL -41 479 466 207 0 0 0 chr5 118971001 118971024 -84114508 + (GA)n Simple_repeat Simple_repeat 2 24 0 1459 216 158 31 chr5 118971024 118971431 -84114101 - MLT2B1 LTR ERVL -54 466 1 245 306 117 47 chr5 118971749 118971995 -84113537 - L1ME4a LINE L1 -28 6093 5815 1991 135 7 3 chr5 118971995 118972292 -84113240 - AluSx SINE Alu -14 298 1 245 306 117 47 chr5 118972292 118972388 -84113144 - L1ME4a LINE L1 -306 5815 5727 300 247 42 47 chr5 118972435 118972778 -84112754 - L1ME4a LINE L1 -510 5611 5265 2052 188 65 45 chr5 118973964 118974476 -84111056 + L1MD2 LINE L1 5834 6355 -4 181 267 0 22 chr5 118974710 118974755 -84110777 + MER5B DNA MER1_type 68 111 -67 198 0 0 0 chr5 118974770 118974792 -84110740 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 267 150 0 0 chr5 118974819 118974859 -84110673 - MER5B DNA MER1_type -135 43 4 * 408 325 50 64 chr5 118974859 118974920 -84110612 - L2 LINE L2 -1087 2227 2167 856 190 11 17 chr5 118974920 118975099 -84110433 - MER5B DNA MER1_type 0 178 1 408 325 50 64 chr5 118975099 118975387 -84110145 - L2 LINE L2 -1147 2167 1883 216 316 79 97 chr5 118975326 118975554 -84109978 - MIR SINE MIR 0 262 39 * 1597 218 88 41 chr5 118976189 118976726 -84108806 + L1ME3A LINE L1 5587 6148 -22 7582 143 68 48 chr5 118977136 118978312 -84107220 + L1MCa LINE L1 42 1193 -5233 2250 117 0 0 chr5 118978312 118978612 -84106920 + AluSg SINE Alu 1 300 -10 7582 143 68 48 chr5 118978612 118979631 -84105901 + L1MCa LINE L1 1193 2367 -4059 15676 185 29 34 chr5 118979649 118983707 -84101825 + L1P3 LINE L1 10 4097 -2364 1196 119 81 19 chr5 118983708 118983918 -84101614 + L1PA10 LINE L1 5946 6168 0 3509 237 26 10 chr5 118983930 118984594 -84100938 + L1MCa LINE L1 2366 3056 -3370 2303 78 0 16 chr5 118984594 118984901 -84100631 + AluY SINE Alu 1 302 -9 3509 237 26 10 chr5 118984901 118985363 -84100169 + L1MCa LINE L1 3056 3509 -2917 26 88 0 0 chr5 118985394 118985462 -84100070 + GC_rich Low_complexity Low_complexity 1 68 0 189 0 0 0 chr5 118985471 118985492 -84100040 + (CAG)n Simple_repeat Simple_repeat 1 21 0 2014 169 19 0 chr5 118987787 118988153 -84097379 + L1MC1 LINE L1 5956 6328 -5 818 151 114 0 chr5 118990609 118990775 -84094757 - MER5A DNA MER1_type -2 187 3 670 276 23 0 chr5 118990785 118990959 -84094573 + MER5B DNA MER1_type 1 178 0 202 255 0 59 chr5 118990970 118991021 -84094511 + MER5B DNA MER1_type 2 49 -129 596 130 15 69 chr5 118991030 118991161 -84094371 - L1MB7 LINE L1 -19 6165 6042 389 248 132 31 chr5 118991161 118991290 -84094242 - MER5B DNA MER1_type -34 144 3 2065 125 0 0 chr5 118991669 118991956 -84093576 + AluSx SINE Alu 14 300 -12 1440 187 50 7 chr5 118992071 118992349 -84093183 - AluJo SINE Alu -12 300 11 275 303 64 64 chr5 118992510 118992698 -84092834 + MIR SINE MIR 51 238 -24 743 323 63 39 chr5 118993271 118993559 -84091973 - L1MC4a LINE L1 -749 5397 5566 2103 124 0 3 chr5 118993559 118993857 -84091675 + AluSq SINE Alu 1 297 -16 743 323 63 39 chr5 118993857 118994379 -84091153 - L1MC4a LINE L1 -579 5567 5059 503 279 96 43 chr5 118994419 118995096 -84090436 - L1MC4a LINE L1 -1328 4818 4114 1744 168 17 0 chr5 118995440 118995731 -84089801 - 7SLRNA srpRNA srpRNA -20 300 5 1490 291 122 17 chr5 118996080 118996679 -84088853 - L3 LINE CR1 -534 1043 382 388 289 41 12 chr5 118996709 118997061 -84088471 - MLT1K LTR MaLR -35 553 100 233 219 27 14 chr5 118997232 118997305 -84088227 + (TA)n Simple_repeat Simple_repeat 1 74 0 552 292 47 39 chr5 119000498 119000755 -84084777 + MIR SINE MIR 4 262 0 518 264 45 40 chr5 119001068 119001269 -84084263 + L2 LINE L2 3111 3312 -1 205 195 24 110 chr5 119001784 119001866 -84083666 - L2 LINE L2 -81 3232 3158 1117 194 146 39 chr5 119002077 119002407 -84083125 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr5 119002733 119002754 -84082778 + (T)n Simple_repeat Simple_repeat 1 21 0 209 347 114 29 chr5 119003363 119003608 -84081924 - L2 LINE L2 -922 2392 2127 336 152 0 0 chr5 119004708 119004774 -84080758 + (TA)n Simple_repeat Simple_repeat 2 67 0 368 288 21 143 chr5 119005148 119005533 -84079999 - L2 LINE L2 -2 3270 2933 534 263 83 13 chr5 119005560 119005716 -84079816 - L2 LINE L2 -489 2825 2659 339 335 75 13 chr5 119006672 119006911 -84078621 - L3 LINE CR1 -200 1377 1124 738 261 11 5 chr5 119007447 119007635 -84077897 + MER5A DNA MER1_type 1 189 0 182 114 0 29 chr5 119010146 119010181 -84075351 + (GGA)n Simple_repeat Simple_repeat 1 34 0 296 354 33 51 chr5 119010183 119010398 -84075134 + L3b LINE CR1 1193 1403 -180 438 253 34 34 chr5 119010653 119010799 -84074733 + MIR SINE MIR 6 151 -111 623 278 44 15 chr5 119012252 119012457 -84073075 + MIR SINE MIR 47 257 -5 2718 230 54 20 chr5 119012917 119013268 -84072264 + L1ME2 LINE L1 4616 4953 -1211 2420 113 8 46 chr5 119013268 119013658 -84071874 + THE1C LTR MaLR 1 375 0 9818 112 45 25 chr5 119013658 119015207 -84070325 + THE1C-int LTR MaLR 1 1580 0 2346 109 5 58 chr5 119015208 119015603 -84069929 + THE1C LTR MaLR 2 375 0 2718 230 54 20 chr5 119015603 119016726 -84068806 + L1ME2 LINE L1 4952 6153 -11 300 310 44 0 chr5 119016887 119017000 -84068532 + L1MC4 LINE L1 7923 8040 -2 222 293 52 84 chr5 119017049 119017240 -84068292 - L2 LINE L2 -531 2783 2599 318 279 43 94 chr5 119017274 119017550 -84067982 - L2 LINE L2 -805 2509 2248 962 186 63 120 chr5 119017555 119017937 -84067595 - MLT1A1 LTR MaLR -5 360 1 277 266 193 33 chr5 119017937 119018181 -84067351 - L2 LINE L2 -1062 2252 1970 229 356 123 14 chr5 119018203 119018349 -84067183 - L2 LINE L2 -215 3057 2896 796 154 0 144 chr5 119018485 119018680 -84066852 - MER5A DNA MER1_type -22 167 1 518 332 97 17 chr5 119019807 119020096 -84065436 + L3 LINE CR1 1085 1396 -181 * 707 293 89 4 chr5 119020094 119020319 -84065213 + MIR SINE MIR 6 249 -13 357 355 0 16 chr5 119020814 119020935 -84064597 - L2 LINE L2 -5 3267 3149 2339 112 0 0 chr5 119022314 119022618 -84062914 + AluSg SINE Alu 1 304 -6 446 307 29 15 chr5 119026772 119026909 -84058623 + MER91A DNA MER1_type 23 161 -35 180 0 0 0 chr5 119027192 119027212 -84058320 + (T)n Simple_repeat Simple_repeat 1 20 0 538 296 36 18 chr5 119027458 119027678 -84057854 + MER102b DNA MER1_type 103 326 -15 7865 117 26 2 chr5 119028177 119029419 -84056113 - Tigger1 DNA MER2_type 0 2418 1147 243 278 62 0 chr5 119032227 119032324 -84053208 - L1ME4a LINE L1 -196 5925 5823 424 282 66 73 chr5 119032840 119033113 -84052419 - MER102a DNA MER1_type -4 326 56 468 273 122 35 chr5 119034232 119034602 -84050930 + L1ME4a LINE L1 5718 6119 -2 2028 139 0 7 chr5 119036544 119036847 -84048685 - AluJb SINE Alu -10 302 2 257 217 0 14 chr5 119038466 119038535 -84046997 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 963 171 39 147 chr5 119040368 119040782 -84044750 - Zaphod DNA AcHobo 0 4031 3663 747 178 81 17 chr5 119040819 119040993 -84044539 - L1MB5 LINE L1 -8 6166 5982 21 104 0 0 chr5 119041131 119041208 -84044324 + AT_rich Low_complexity Low_complexity 1 77 0 690 203 34 68 chr5 119041433 119041670 -84043862 + MLT2B1 LTR ERVL 282 510 -10 3302 232 50 25 chr5 119041676 119041874 -84043658 - L1M4 LINE L1 -5539 1003 811 366 23 0 0 chr5 119041874 119041917 -84043615 + (TG)n Simple_repeat Simple_repeat 2 44 0 3302 232 50 25 chr5 119041917 119042684 -84042848 - L1M4 LINE L1 -5731 811 14 371 273 88 31 chr5 119042695 119042889 -84042643 - HAL1b LINE L1 -764 584 380 431 307 98 12 chr5 119042904 119043148 -84042384 + MER77 LTR ERV1 328 592 -13 706 274 42 7 chr5 119043238 119043548 -84041984 - L1M4 LINE L1 -818 5328 5008 30 0 0 0 chr5 119045447 119045477 -84040055 + AT_rich Low_complexity Low_complexity 1 30 0 264 241 74 37 chr5 119045695 119045803 -84039729 + MER103 DNA DNA 1 112 -54 347 276 47 24 chr5 119045853 119046023 -84039509 + L1ME4a LINE L1 5729 5902 -219 284 204 80 68 chr5 119046037 119046199 -84039333 + L1ME4a LINE L1 5956 6119 -2 695 262 11 27 chr5 119046313 119046496 -84039036 + MER58A DNA MER1_type 2 181 -43 285 167 0 0 chr5 119046501 119046549 -84038983 + MER96 DNA MER1_type? 26 73 -102 496 299 34 50 chr5 119046595 119046916 -84038616 - LTR16B LTR ERVL -1 463 148 1505 201 25 15 chr5 119047101 119047470 -84038062 + MLT1A1 LTR MaLR 1 365 0 2091 183 0 16 chr5 119048073 119048444 -84037088 + MLT1A1 LTR MaLR 1 365 0 3266 221 97 68 chr5 119048462 119049051 -84036481 + MLT1A1-int LTR MaLR 20 591 -780 239 26 79 0 chr5 119049051 119049089 -84036443 + A-rich Low_complexity Low_complexity 5 45 0 3266 221 97 68 chr5 119049089 119049813 -84035719 + MLT1A1-int LTR MaLR 591 1370 -1 2095 151 14 27 chr5 119049814 119050184 -84035348 + MLT1A1 LTR MaLR 1 365 0 349 282 89 35 chr5 119050293 119050495 -84035037 + MLT1K LTR MaLR 374 586 -2 451 255 42 52 chr5 119050572 119050764 -84034768 - MLT1L LTR MaLR 0 615 426 192 152 0 0 chr5 119050947 119050980 -84034552 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 690 219 0 152 chr5 119051074 119051330 -84034202 - MIR SINE MIR -6 256 40 349 306 9 19 chr5 119051329 119051437 -84034095 + MIR SINE MIR 22 128 -134 * 2146 219 81 38 chr5 119051491 119052071 -84033461 - MER77 LTR ERV1 0 605 1 237 232 27 108 chr5 119052520 119052590 -84032942 - Charlie7 DNA MER1_type 0 2612 2538 3626 133 49 0 chr5 119052590 119053163 -84032369 - MER7C DNA MER2_type -1 601 1 237 232 27 108 chr5 119053163 119053277 -84032255 - Charlie7 DNA MER1_type -74 2538 2443 311 283 11 0 chr5 119053280 119053372 -84032160 - Charlie7 DNA MER1_type -2511 101 9 6217 107 42 1 chr5 119054226 119055173 -84030359 + L1PA13 LINE L1 5181 6163 0 278 224 80 56 chr5 119055190 119055315 -84030217 + L1ME LINE L1 6 133 -5937 1550 242 141 40 chr5 119055997 119056290 -84029242 - L2 LINE L2 0 3313 3051 2741 129 41 22 chr5 119056290 119056707 -84028825 - MSTB LTR MaLR 0 426 2 1550 242 141 40 chr5 119056707 119057155 -84028377 - L2 LINE L2 -262 3051 2530 2141 109 55 0 chr5 119057296 119057589 -84027943 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr5 119057676 119057696 -84027836 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 292 242 114 45 chr5 119057702 119057834 -84027698 + MER102a DNA MER1_type 96 236 -94 271 275 0 0 chr5 119057829 119057898 -84027634 + MER102a DNA MER1_type 252 320 -10 * 31 26 0 0 chr5 119059779 119059817 -84025715 + AT_rich Low_complexity Low_complexity 1 38 0 841 176 0 0 chr5 119059819 119059955 -84025577 - FLAM_C SINE Alu -1 142 7 248 220 0 0 chr5 119162048 119162107 -83923425 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 1997 110 43 4 chr5 119163473 119163754 -83921778 + AluJb SINE Alu 1 292 -20 652 234 165 5 chr5 119164191 119164409 -83921123 + MIR SINE MIR 2 254 -8 594 123 18 9 chr5 119164455 119164569 -83920963 + MER113 DNA MER1_type? 109 223 -298 1280 157 7 1 chr5 119164679 119181112 -83904420 - ALR/Alpha Satellite centromeric -1 16540 1 278 327 12 61 chr5 119281573 119281738 -83803794 - MIR SINE MIR -68 194 38 656 287 57 36 chr5 119281749 119282028 -83803504 + L2 LINE L2 2988 3272 -41 186 182 0 0 chr5 119282111 119282144 -83803388 - MER5A DNA MER1_type -139 50 18 1728 171 64 51 chr5 119282807 119283200 -83802332 + L1MC4 LINE L1 6689 7086 -956 1674 234 27 16 chr5 119283231 119283671 -83801861 + L1MD3 LINE L1 7540 7984 -11 398 270 79 20 chr5 119284293 119284445 -83801087 + MIR SINE MIR 59 219 -43 697 125 17 40 chr5 119285896 119286072 -83799460 + CT-rich Low_complexity Low_complexity 3 174 0 22 35 0 0 chr5 119287424 119287453 -83798079 + AT_rich Low_complexity Low_complexity 1 29 0 909 238 49 14 chr5 119287632 119287855 -83797677 - MIR SINE MIR -20 242 12 318 254 232 14 chr5 119289412 119289550 -83795982 - MIR SINE MIR -44 218 51 1591 159 10 51 chr5 119291491 119291786 -83793746 - AluJb SINE Alu -14 298 16 22 56 0 0 chr5 119292327 119292363 -83793169 + AT_rich Low_complexity Low_complexity 1 36 0 715 275 43 0 chr5 119294653 119294864 -83790668 - MIR SINE MIR -8 254 35 367 255 188 24 chr5 119295064 119295301 -83790231 + L2 LINE L2 2963 3305 -8 352 309 94 37 chr5 119295392 119295583 -83789949 - L2 LINE L2 -245 3027 2826 * 490 304 126 27 chr5 119295566 119295829 -83789703 - L2 LINE L2 -4 3309 3021 347 297 162 7 chr5 119295821 119295969 -83789563 - MIR SINE MIR -69 193 23 * 394 283 24 54 chr5 119296212 119296378 -83789154 + MIR SINE MIR 52 212 -50 2313 238 61 42 chr5 119296899 119297819 -83787713 + L1MC4a LINE L1 5598 6534 -1274 198 236 0 0 chr5 119299512 119299567 -83785965 + A-rich Low_complexity Low_complexity 1 55 0 765 265 71 21 chr5 119300036 119300274 -83785258 + MIR SINE MIR 13 262 0 192 222 93 0 chr5 119300552 119300606 -83784926 - MIR SINE MIR -92 116 58 489 237 50 29 chr5 119301227 119301366 -83784166 - L2 LINE L2 -1 3312 3171 472 309 84 34 chr5 119301437 119301819 -83783713 + L2 LINE L2 1702 2102 -1212 363 271 194 0 chr5 119301793 119301922 -83783610 + MIR SINE MIR 109 262 0 * 345 263 113 38 chr5 119301950 119302083 -83783449 + L2 LINE L2 3171 3313 0 198 0 0 0 chr5 119303565 119303587 -83781945 + (T)n Simple_repeat Simple_repeat 1 22 0 1899 113 8 4 chr5 119303788 119304053 -83781479 + AluY SINE Alu 30 295 -16 731 218 23 6 chr5 119304484 119304658 -83780874 - MER5B DNA MER1_type 0 178 2 353 326 21 92 chr5 119305819 119306058 -83779474 + L2 LINE L2 2988 3209 -63 240 269 128 13 chr5 119306440 119306518 -83779014 + MIR SINE MIR 2 88 -174 351 266 184 9 chr5 119307639 119307748 -83777784 - L2 LINE L2 -4 3309 3182 343 325 36 41 chr5 119309684 119309761 -83775771 + L3b LINE CR1 1314 1390 -193 2426 134 70 7 chr5 119309761 119310164 -83775368 - MSTA LTR MaLR 0 428 1 343 325 36 41 chr5 119310164 119310280 -83775252 + L3b LINE CR1 1390 1506 -77 238 248 165 15 chr5 119310468 119310601 -83774931 - MIR SINE MIR -16 246 94 190 273 0 185 chr5 119310637 119310842 -83774690 - L2 LINE L2 -91 3181 3015 273 363 11 37 chr5 119311142 119311332 -83774200 - L2 LINE L2 -216 3056 2872 1754 153 71 20 chr5 119312746 119313099 -83772433 - MLT1D LTR MaLR -4 501 131 723 77 0 0 chr5 119313118 119313209 -83772323 - AluSg/x SINE Alu -11 299 209 419 165 0 142 chr5 119313212 119313275 -83772257 - MLT1D LTR MaLR -517 109 71 2437 187 29 0 chr5 119313275 119313687 -83771845 - MSTB LTR MaLR 0 426 3 419 165 0 142 chr5 119313687 119313750 -83771782 - MLT1D LTR MaLR -555 71 1 386 270 79 20 chr5 119313871 119314023 -83771509 - MIR SINE MIR -43 219 59 185 290 145 0 chr5 119314902 119314964 -83770568 - MER5C DNA MER1_type -1 323 253 1843 240 234 18 chr5 119315167 119316039 -83769493 - L2 LINE L2 -266 3047 1986 293 239 65 22 chr5 119316050 119316142 -83769390 + MIR SINE MIR 110 205 -57 187 212 15 91 chr5 119316234 119316300 -83769232 + L2 LINE L2 3251 3311 -2 430 217 12 0 chr5 119317913 119317996 -83767536 - L2 LINE L2 0 3272 3189 203 313 40 67 chr5 119318021 119318171 -83767361 - MER5A DNA MER1_type -5 184 39 398 264 8 25 chr5 119318729 119318850 -83766682 + 7SK RNA RNA 1 119 -74 226 214 0 0 chr5 119320944 119320986 -83764546 + CT-rich Low_complexity Low_complexity 3 44 0 233 214 0 0 chr5 119321549 119321591 -83763941 - L2 LINE L2 -8 3305 3264 1858 154 13 0 chr5 119322018 119322316 -83763216 - AluSx SINE Alu -10 302 1 227 277 115 62 chr5 119322827 119322957 -83762575 + L2 LINE L2 3165 3301 -12 633 224 73 18 chr5 119322996 119323161 -83762371 - MIR SINE MIR -62 200 27 366 293 275 0 chr5 119323818 119323956 -83761576 - MIR3 SINE MIR -43 219 45 3185 216 70 46 chr5 119325352 119326078 -83759454 + Zaphod DNA AcHobo 108 860 -3171 1219 119 28 46 chr5 119326078 119326296 -83759236 - L1MB2 LINE L1 -1 6170 5957 3185 216 70 46 chr5 119326296 119326460 -83759072 + Zaphod DNA AcHobo 860 1019 -3012 1858 187 75 2 chr5 119326609 119327011 -83758521 + Zaphod DNA AcHobo 3590 4020 -11 208 333 0 0 chr5 119327075 119327126 -83758406 + L2 LINE L2 3174 3224 -48 227 357 86 36 chr5 119327165 119327305 -83758227 - L2 LINE L2 -1 3271 3125 510 215 8 16 chr5 119327383 119327504 -83758028 + MIR SINE MIR 127 246 -16 219 227 0 0 chr5 119327528 119327594 -83757938 + (TAG)n Simple_repeat Simple_repeat 2 67 0 248 355 102 32 chr5 119327776 119328216 -83757316 - L2 LINE L2 -2707 607 137 246 267 133 33 chr5 119328322 119328472 -83757060 + MIR SINE MIR 58 222 -40 201 340 52 0 chr5 119330126 119330223 -83755309 + L2 LINE L2 2251 2352 -962 344 298 97 29 chr5 119330229 119330409 -83755123 + MLT1F1 LTR MaLR 1 199 -362 1530 174 50 121 chr5 119330445 119330865 -83754667 + MLT1F1 LTR MaLR 178 567 0 1570 203 10 17 chr5 119331105 119331405 -83754127 - AluJb SINE Alu -12 300 3 298 297 42 89 chr5 119331428 119331687 -83753845 + L2 LINE L2 2866 3112 -160 766 261 35 31 chr5 119331735 119331844 -83753688 + MIR SINE MIR 5 112 -150 1923 147 72 33 chr5 119331844 119332205 -83753327 + THE1C LTR MaLR 1 375 0 766 261 35 31 chr5 119332205 119332352 -83753180 + MIR SINE MIR 112 262 0 301 295 71 23 chr5 119332785 119332965 -83752567 + MIR SINE MIR 13 207 -55 1888 163 7 3 chr5 119335020 119335314 -83750218 + AluJo SINE Alu 2 296 -16 1281 34 0 21 chr5 119335317 119335551 -83749981 + (GAAA)n Simple_repeat Simple_repeat 1 229 0 469 295 40 7 chr5 119336674 119336823 -83748709 + MIR SINE MIR 20 173 -89 418 325 88 15 chr5 119340722 119340996 -83744536 + L1MC/D LINE L1 4878 5171 -975 699 232 119 35 chr5 119341063 119341382 -83744150 + L1MC/D LINE L1 5267 5612 -2196 307 305 51 8 chr5 119341801 119341919 -83743613 + MIR3 SINE MIR 75 197 -11 255 152 0 0 chr5 119342667 119342713 -83742819 + (CA)n Simple_repeat Simple_repeat 2 47 0 545 303 94 50 chr5 119343655 119344015 -83741517 + MLT1I LTR MaLR 34 409 0 606 283 84 20 chr5 119344079 119344330 -83741202 + MLT1L LTR MaLR 349 615 0 237 108 0 0 chr5 119344359 119344396 -83741136 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 180 275 176 30 chr5 119344656 119344787 -83740745 - L2 LINE L2 -1 3271 3122 563 307 98 25 chr5 119345229 119345636 -83739896 - LTR16A LTR ERVL -10 440 4 259 329 0 0 chr5 119345683 119345768 -83739764 - ERVL LTR ERVL -21 4975 4891 1465 178 3 65 chr5 119345781 119346102 -83739430 + AluJb SINE Alu 7 307 -5 707 338 74 20 chr5 119346490 119346994 -83738538 - ERVL LTR ERVL -1772 3882 3354 525 211 0 79 chr5 119347007 119347121 -83738411 + MER81 DNA DNA 5 109 -5 252 375 0 8 chr5 119347141 119347261 -83738271 - ERVL LTR ERVL -2332 3322 3204 314 29 0 0 chr5 119347261 119347296 -83738236 - U2 snRNA snRNA -153 35 1 1516 299 52 14 chr5 119347297 119347872 -83737660 - HERV16 LTR ERVL -4390 606 10 393 315 91 15 chr5 119347882 119348079 -83737453 - LTR16A LTR ERVL 0 450 239 41 36 0 0 chr5 119348964 119349019 -83736513 + AT_rich Low_complexity Low_complexity 1 55 0 190 128 26 26 chr5 119349795 119349834 -83735698 - L2 LINE L2 -1 3312 3274 207 323 71 0 chr5 119350111 119350210 -83735322 + L2 LINE L2 3208 3313 0 442 287 57 25 chr5 119351001 119351158 -83734374 - MIR3 SINE MIR -41 167 6 683 305 51 30 chr5 119351566 119351900 -83733632 + L1ME3A LINE L1 97 437 -5633 1306 232 60 60 chr5 119352020 119352649 -83732883 - L1ME LINE L1 -4951 1648 1053 691 241 64 26 chr5 119352705 119352970 -83732562 - L1M4 LINE L1 -1675 4471 4197 386 250 36 9 chr5 119353097 119353209 -83732323 + L1ME3A LINE L1 3426 3540 -2540 1096 221 29 0 chr5 119353401 119353645 -83731887 + L1ME3A LINE L1 3848 4098 -1982 2685 229 49 13 chr5 119353654 119354430 -83731102 + L1ME3A LINE L1 4005 4808 -1272 637 175 8 0 chr5 119354457 119354577 -83730955 - L1ME LINE L1 -416 5748 5628 279 231 77 0 chr5 119354579 119354657 -83730875 + HSMAR1 DNA Mariner 1204 1287 0 1486 241 38 44 chr5 119354687 119355165 -83730367 + L1ME3A LINE L1 5253 5727 -371 864 196 146 107 chr5 119355265 119355668 -83729864 + L1ME2 LINE L1 5745 6163 -1 396 0 0 0 chr5 119355859 119355903 -83729629 + (TA)n Simple_repeat Simple_repeat 2 45 0 1074 282 48 50 chr5 119356647 119357003 -83728529 + L1ME3A LINE L1 5411 5801 -369 2064 131 101 15 chr5 119357003 119357339 -83728193 + MLT1A1 LTR MaLR 1 365 0 1074 282 48 50 chr5 119357339 119357494 -83728038 + L1ME3A LINE L1 5801 5955 -215 332 277 99 54 chr5 119357500 119357742 -83727790 + L1ME3A LINE L1 5829 6081 -23 26 30 0 0 chr5 119359589 119359622 -83725910 + AT_rich Low_complexity Low_complexity 1 33 0 312 263 88 36 chr5 119359907 119360048 -83725484 - L1ME3A LINE L1 -219 5934 5787 637 261 151 17 chr5 119360070 119360369 -83725163 - L1ME3A LINE L1 -433 5714 5377 235 252 135 68 chr5 119360369 119360487 -83725045 - L1ME3A LINE L1 -1481 4648 4539 1766 213 32 59 chr5 119360487 119360961 -83724571 - LTR40b LTR ERVL -1 461 1 235 252 135 68 chr5 119360961 119361382 -83724150 - L1ME3A LINE L1 -1590 4539 4073 1519 198 38 0 chr5 119361382 119361670 -83723862 - AluJo SINE Alu -13 299 1 661 281 50 85 chr5 119361769 119362106 -83723426 - L1ME3A LINE L1 -5288 831 484 297 0 0 0 chr5 119362106 119362139 -83723393 + (TG)n Simple_repeat Simple_repeat 2 34 0 1669 170 0 53 chr5 119362139 119362439 -83723093 - AluJb SINE Alu -28 284 1 661 281 50 85 chr5 119362439 119362619 -83722913 - L1ME3A LINE L1 -5633 486 331 794 219 47 12 chr5 119362741 119362910 -83722622 - MER5A DNA MER1_type -11 178 4 867 269 19 0 chr5 119362927 119363143 -83722389 - MER58A DNA MER1_type -4 220 1 279 385 6 12 chr5 119363155 119363321 -83722211 - L1ME3A LINE L1 -5953 166 2 2158 116 79 17 chr5 119363947 119364300 -83721232 + THE1C LTR MaLR 1 375 0 234 0 0 0 chr5 119364871 119364897 -83720635 + (T)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr5 119366912 119366938 -83718594 + AT_rich Low_complexity Low_complexity 1 26 0 255 343 74 9 chr5 119368450 119368558 -83716974 + L2 LINE L2 3154 3268 -4 22 0 0 0 chr5 119369675 119369697 -83715835 + AT_rich Low_complexity Low_complexity 1 22 0 191 226 0 113 chr5 119369956 119370009 -83715523 - L2 LINE L2 -10 3262 3216 748 248 62 26 chr5 119370803 119371029 -83714503 - MIR SINE MIR 0 262 29 327 49 0 0 chr5 119371066 119371107 -83714425 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 746 226 11 23 chr5 119371611 119371788 -83713744 - MER5B DNA MER1_type 0 178 4 410 192 26 13 chr5 119374571 119374649 -83710883 + MER58B DNA MER1_type 260 338 -3 231 329 0 29 chr5 119374655 119374725 -83710807 + L2 LINE L2 2685 2752 -562 283 336 117 0 chr5 119374827 119374955 -83710577 + L2 LINE L2 2917 3059 -213 479 324 65 24 chr5 119375171 119375464 -83710068 + MARNA DNA Mariner 146 450 -136 776 284 86 35 chr5 119375619 119376496 -83709036 + L1ME3A LINE L1 4993 5946 -224 495 0 0 0 chr5 119377083 119377138 -83708394 + (TA)n Simple_repeat Simple_repeat 2 56 0 1432 186 65 0 chr5 119377142 119377283 -83708249 - AluJo SINE Alu -32 280 150 270 0 0 0 chr5 119377283 119377313 -83708219 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1432 186 65 0 chr5 119377313 119377434 -83708098 - AluJo SINE Alu -162 150 1 339 285 134 20 chr5 119377546 119377844 -83707688 + L1MC4a LINE L1 5866 6197 -1611 234 228 25 38 chr5 119378602 119378681 -83706851 + MIR3 SINE MIR 130 207 -1 590 307 98 22 chr5 119379189 119379547 -83705985 + L2 LINE L2 2449 2833 -481 318 283 245 25 chr5 119379545 119379704 -83705828 + MIR SINE MIR 66 259 -3 * 745 308 138 64 chr5 119379855 119380524 -83705008 + L3 LINE CR1 818 1535 -42 704 222 177 5 chr5 119380528 119380731 -83704801 - MIR SINE MIR -6 256 19 2487 53 3 7 chr5 119381661 119381965 -83703567 + AluY SINE Alu 1 303 -8 325 283 0 22 chr5 119381980 119382072 -83703460 - MIR SINE MIR -100 108 19 250 332 102 26 chr5 119382082 119382347 -83703185 + L2 LINE L2 2257 2541 -773 31 58 0 0 chr5 119383690 119383742 -83701790 + AT_rich Low_complexity Low_complexity 1 52 0 216 265 286 7 chr5 119384762 119384909 -83700623 + MER5A DNA MER1_type 2 189 0 370 270 230 0 chr5 119384985 119385185 -83700347 + MIR SINE MIR 4 249 -13 22 0 0 0 chr5 119386739 119386761 -83698771 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr5 119387922 119387959 -83697573 + (CA)n Simple_repeat Simple_repeat 2 38 0 1685 132 99 108 chr5 119388781 119389206 -83696326 - L1MA7 LINE L1 -35 6256 5836 290 311 54 113 chr5 119389318 119389691 -83695841 - L2 LINE L2 -3 3269 2919 1852 153 3 28 chr5 119389710 119390067 -83695465 - AluJb SINE Alu 0 349 1 877 140 28 0 chr5 119390649 119390792 -83694740 + L1MB4 LINE L1 6024 6170 -10 285 203 174 14 chr5 119391782 119391851 -83693681 - L2 LINE L2 -18 3254 3175 268 376 41 36 chr5 119392011 119392232 -83693300 + MIR SINE MIR 20 241 -21 329 331 97 7 chr5 119394608 119394762 -83690770 - HAL1 LINE L1 -10 2497 2330 490 273 153 46 chr5 119394768 119395134 -83690398 - HAL1 LINE L1 -1865 642 238 583 209 30 0 chr5 119395214 119395348 -83690184 - L1MB4 LINE L1 -8 6172 6035 253 423 13 0 chr5 119395512 119395661 -83689871 - MIR3 SINE MIR -52 156 6 1881 75 0 0 chr5 119395993 119396234 -83689298 + L1PA5 LINE L1 5914 6154 0 275 173 93 13 chr5 119396533 119396608 -83688924 - L1MA9 LINE L1 -3 6309 6229 486 264 110 7 chr5 119396697 119396852 -83688680 - MIR SINE MIR -86 176 6 898 259 23 5 chr5 119397531 119397747 -83687785 + MER58A DNA MER1_type 3 222 -2 271 286 72 115 chr5 119400330 119400634 -83684898 + L2 LINE L2 2982 3272 0 318 218 11 46 chr5 119400641 119400728 -83684804 + L2 LINE L2 3186 3269 -3 186 43 0 0 chr5 119400728 119400751 -83684781 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 671 296 78 78 chr5 119400913 119401349 -83684183 - L3b LINE CR1 -33 1550 1115 353 210 261 8 chr5 119401538 119401657 -83683875 - MER5B DNA MER1_type -29 149 1 251 321 12 37 chr5 119402015 119402096 -83683436 + L2 LINE L2 3115 3193 -79 2086 249 62 19 chr5 119402150 119402906 -83682626 - L1ME3A LINE L1 -3 6167 5379 1777 185 0 7 chr5 119404169 119404471 -83681061 + AluJb SINE Alu 1 300 -12 1600 272 106 7 chr5 119404665 119405432 -83680100 - L2 LINE L2 -1 3312 2459 2415 129 3 3 chr5 119405672 119406036 -83679496 - MER47A DNA MER2_type -1 365 2 197 241 0 19 chr5 119406116 119406170 -83679362 - L2 LINE L2 0 3313 3261 231 270 0 16 chr5 119407082 119407145 -83678387 + (CA)n Simple_repeat Simple_repeat 1 62 0 591 228 66 0 chr5 119407165 119407301 -83678231 + MER69 DNA AcHobo 1 145 -2381 361 187 13 13 chr5 119407302 119407377 -83678155 + MER69 DNA AcHobo 2452 2526 0 208 302 19 0 chr5 119407449 119407502 -83678030 - MER5B DNA MER1_type -124 54 1 707 239 105 33 chr5 119408525 119408915 -83676617 - HAL1b LINE L1 -217 1131 714 312 254 81 60 chr5 119409156 119409341 -83676191 - HAL1b LINE L1 -915 433 245 276 139 0 0 chr5 119410191 119410234 -83675298 - HAL1 LINE L1 -360 2147 2105 10421 125 39 32 chr5 119410245 119412298 -83673234 + Tigger2 DNA MER2_type 440 2506 -212 5568 47 9 6 chr5 119412310 119413006 -83672526 - L1PA7 LINE L1 -49 6105 5408 856 135 20 7 chr5 119413006 119413154 -83672378 + Tigger2 DNA MER2_type 2505 2654 -64 1275 146 42 25 chr5 119413161 119413400 -83672132 + AluJo SINE Alu 14 256 -56 284 216 98 0 chr5 119413412 119413463 -83672069 + Tigger2 DNA MER2_type 2659 2714 -4 23 0 0 0 chr5 119413574 119413597 -83671935 + AT_rich Low_complexity Low_complexity 1 23 0 709 156 28 14 chr5 119413602 119413743 -83671789 + L1PB4 LINE L1 6006 6148 -8 339 221 0 0 chr5 119415046 119415114 -83670418 - MER116 DNA Mariner -11 69 2 500 254 60 115 chr5 119415359 119415925 -83669607 - Charlie8 DNA MER1_type -2140 277 1 480 288 14 34 chr5 119417272 119417418 -83668114 - MIR SINE MIR -101 161 19 405 293 104 47 chr5 119417845 119418269 -83667263 + L2 LINE L2 2229 2676 -638 231 338 0 0 chr5 119418714 119418782 -83666750 + G-rich Low_complexity Low_complexity 5 72 0 505 302 70 19 chr5 119420203 119420418 -83665114 - MIR SINE MIR -9 253 28 361 282 17 8 chr5 119421010 119421127 -83664405 + MARNA DNA Mariner 458 575 -11 5589 24 0 0 chr5 119421262 119421999 -83663533 + L1PA3 LINE L1 5173 5906 -249 561 300 67 51 chr5 119424213 119424823 -83660709 + L1ME3 LINE L1 3998 4617 -1529 375 317 155 14 chr5 119425118 119425408 -83660124 + L1ME3 LINE L1 4748 5078 -1068 785 261 82 0 chr5 119425424 119425619 -83659913 - MIR SINE MIR -1 261 51 21 0 0 0 chr5 119425776 119425797 -83659735 + AT_rich Low_complexity Low_complexity 1 21 0 647 308 39 4 chr5 119425812 119426111 -83659421 + L1ME3 LINE L1 5313 5625 -545 409 239 234 30 chr5 119426136 119426303 -83659229 - MIR SINE MIR -14 248 48 356 316 42 2 chr5 119426328 119426564 -83658968 + L1ME3 LINE L1 5691 5886 -276 233 207 69 52 chr5 119426788 119426846 -83658686 + MIR SINE MIR 20 78 -184 21 0 0 0 chr5 119427018 119427039 -83658493 + AT_rich Low_complexity Low_complexity 1 21 0 215 250 18 0 chr5 119427416 119427472 -83658060 + (ATG)n Simple_repeat Simple_repeat 1 57 0 892 318 79 32 chr5 119428441 119428935 -83656597 + MLT1K LTR MaLR 64 580 -8 219 244 0 0 chr5 119431080 119431125 -83654407 + (CTA)n Simple_repeat Simple_repeat 2 46 0 227 333 69 14 chr5 119432708 119432780 -83652752 + L2 LINE L2 3144 3219 -53 1136 278 125 3 chr5 119433174 119433936 -83651596 + L2 LINE L2 2448 3313 0 1370 160 0 0 chr5 119434170 119434382 -83651150 - AluSq SINE Alu -16 297 86 262 192 19 0 chr5 119437145 119437197 -83648335 + L2 LINE L2 3261 3313 0 755 282 27 24 chr5 119437723 119438021 -83647511 - L2 LINE L2 0 3313 3015 585 174 157 0 chr5 119438031 119438146 -83647386 - FLAM_A SINE Alu 0 133 1 1079 303 50 27 chr5 119439342 119439818 -83645714 + LTR16C LTR ERVL 1 487 -4 255 255 128 21 chr5 119439957 119440051 -83645481 - MIR SINE MIR -8 254 151 * 379 234 85 0 chr5 119440050 119440144 -83645388 + L2 LINE L2 3208 3309 -4 327 248 214 0 chr5 119440144 119440261 -83645271 - MIR SINE MIR -118 144 3 477 316 145 33 chr5 119443487 119444175 -83641357 + L2 LINE L2 2539 3312 -1 1913 130 0 20 chr5 119444767 119445059 -83640473 - AluJb SINE Alu -11 301 16 606 267 13 13 chr5 119445471 119445621 -83639911 - MER5A DNA MER1_type -39 150 1 228 320 52 31 chr5 119445639 119445736 -83639796 + L2 LINE L2 3169 3267 -5 246 62 0 0 chr5 119448921 119448953 -83636579 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr5 119449926 119449958 -83635574 + AT_rich Low_complexity Low_complexity 1 32 0 2275 94 3 3 chr5 119500820 119501117 -83584415 - AluSc SINE Alu -12 297 1 490 238 139 17 chr5 119502300 119502472 -83583060 - MIR SINE MIR -13 249 57 808 160 35 47 chr5 119502942 119503102 -83582430 - MER5A DNA MER1_type -7 182 23 2863 146 51 118 chr5 119503102 119503881 -83581651 + LTR8A LTR ERV1 1 727 0 530 250 190 0 chr5 119503890 119504090 -83581442 + MIR SINE MIR 11 248 -14 364 355 233 3 chr5 119504976 119505294 -83580238 + L3 LINE CR1 885 1275 -302 1372 131 34 5 chr5 119505391 119505597 -83579935 - AluJb SINE Alu -100 212 1 297 0 0 0 chr5 119505606 119505639 -83579893 + (TA)n Simple_repeat Simple_repeat 1 33 0 2508 40 40 0 chr5 119505644 119505943 -83579589 - AluY SINE Alu 0 311 1 187 372 83 41 chr5 119505962 119506083 -83579449 - L2 LINE L2 -11 3261 3136 1588 153 0 8 chr5 119508247 119508489 -83577043 - AluJo SINE Alu -68 244 5 180 77 0 0 chr5 119508961 119508987 -83576545 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 392 199 19 77 chr5 119510825 119510981 -83574551 + L1MC5 LINE L1 7761 7907 -54 23 0 0 0 chr5 119511447 119511470 -83574062 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 119511649 119511681 -83573851 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 119512401 119512433 -83573099 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 119512841 119512863 -83572669 + AT_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr5 119513091 119513141 -83572391 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 119513564 119513585 -83571947 + AT_rich Low_complexity Low_complexity 1 21 0 4615 116 17 16 chr5 119513994 119514751 -83570781 - L1MA4 LINE L1 0 6300 5543 893 276 15 50 chr5 119515430 119515691 -83569841 + MIR SINE MIR 11 262 0 279 0 0 0 chr5 119517083 119517114 -83568418 + (TG)n Simple_repeat Simple_repeat 2 32 0 421 232 28 90 chr5 119517645 119517822 -83567710 - L1MC5 LINE L1 -47 7914 7749 2509 65 0 0 chr5 119517880 119518189 -83567343 - AluY SINE Alu -2 309 1 28 61 0 0 chr5 119519026 119519075 -83566457 + AT_rich Low_complexity Low_complexity 1 49 0 2172 108 0 7 chr5 119519552 119519858 -83565674 + AluSg SINE Alu 1 304 -6 763 214 68 15 chr5 119519928 119520134 -83565398 + L1ME3A LINE L1 5947 6163 -7 28 29 0 0 chr5 119520715 119520750 -83564782 + AT_rich Low_complexity Low_complexity 1 35 0 1884 158 3 0 chr5 119521305 119521608 -83563924 - AluSx SINE Alu -8 304 1 405 292 9 9 chr5 119521711 119521824 -83563708 - MIR SINE MIR -119 143 31 219 342 40 0 chr5 119521974 119522050 -83563482 - MIR SINE MIR -94 114 36 233 344 89 38 chr5 119522130 119522287 -83563245 + MIR SINE MIR 23 187 -75 1520 149 47 40 chr5 119522979 119523300 -83562232 + MER33 DNA MER1_type 1 323 -1 30 83 0 0 chr5 119523519 119523591 -83561941 + AT_rich Low_complexity Low_complexity 1 72 0 253 318 0 0 chr5 119524226 119524292 -83561240 + L2 LINE L2 3242 3307 -6 389 20 20 0 chr5 119524447 119524497 -83561035 + (CA)n Simple_repeat Simple_repeat 2 52 0 258 116 0 0 chr5 119524626 119524669 -83560863 + (CA)n Simple_repeat Simple_repeat 2 44 0 199 282 136 36 chr5 119524690 119524800 -83560732 + L2 LINE L2 3193 3313 0 399 252 48 0 chr5 119525035 119525138 -83560394 + MIR SINE MIR 72 179 -83 204 125 0 0 chr5 119526170 119526202 -83559330 + (TA)n Simple_repeat Simple_repeat 1 32 0 24 53 0 0 chr5 119526423 119526461 -83559071 + AT_rich Low_complexity Low_complexity 1 38 0 2246 113 0 0 chr5 119526487 119526796 -83558736 - AluY SINE Alu -2 309 1 1988 105 7 34 chr5 119527024 119527319 -83558213 - AluSx SINE Alu -23 289 3 420 202 0 0 chr5 119527401 119527490 -83558042 + L1MEd LINE L1 49 137 -5982 * 1688 224 33 65 chr5 119527474 119528052 -83557480 + L1MB8 LINE L1 5593 6151 -27 1181 297 66 52 chr5 119528179 119529219 -83556313 + L1MEd LINE L1 445 1545 -4765 25 31 0 0 chr5 119531198 119531230 -83554302 + AT_rich Low_complexity Low_complexity 1 32 0 332 292 73 0 chr5 119531355 119531492 -83554040 - L2 LINE L2 -773 2541 2395 444 93 0 0 chr5 119534232 119534307 -83551225 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 643 221 171 66 chr5 119535608 119535988 -83549544 + L1MC5 LINE L1 6728 7147 -814 2019 135 14 0 chr5 119536525 119536654 -83548878 + AluSx SINE Alu 1 127 -185 225 0 0 0 chr5 119536654 119536679 -83548853 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 2019 135 14 0 chr5 119536679 119536846 -83548686 + AluSx SINE Alu 127 301 -11 283 214 61 61 chr5 119537127 119537225 -83548307 + MIR SINE MIR 95 192 -70 214 250 33 0 chr5 119537677 119537737 -83547795 + MIR SINE MIR 103 164 -98 2410 76 7 0 chr5 119537737 119538039 -83547493 + AluSp SINE Alu 1 304 -9 563 323 88 23 chr5 119538727 119538987 -83546545 - L3 LINE CR1 -2 1575 1299 2105 138 36 33 chr5 119539728 119540091 -83545441 - THE1B LTR MaLR 0 364 1 203 264 0 0 chr5 119541007 119541060 -83544472 + L2 LINE L2 3257 3309 -4 2240 122 3 0 chr5 119541763 119542075 -83543457 - AluSq SINE Alu 0 313 1 461 316 133 4 chr5 119542460 119542685 -83542847 - MIR SINE MIR -1 261 8 620 267 29 23 chr5 119543795 119543967 -83541565 - MER5B DNA MER1_type -5 173 1 304 256 120 24 chr5 119544172 119544297 -83541235 - MIR SINE MIR -95 167 31 187 152 43 0 chr5 119544617 119544663 -83540869 + (CATA)n Simple_repeat Simple_repeat 2 49 0 26 30 0 0 chr5 119544926 119544959 -83540573 + AT_rich Low_complexity Low_complexity 1 33 0 251 268 0 0 chr5 119545663 119545719 -83539813 + (TG)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 119545764 119545788 -83539744 + AT_rich Low_complexity Low_complexity 1 24 0 40 21 0 0 chr5 119546283 119546330 -83539202 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr5 119547338 119547376 -83538156 + AT_rich Low_complexity Low_complexity 1 38 0 513 104 0 0 chr5 119550672 119550749 -83534783 + (CA)n Simple_repeat Simple_repeat 2 78 0 247 158 0 0 chr5 119551115 119551153 -83534379 - U2 snRNA snRNA -150 38 1 219 240 173 0 chr5 119556885 119556960 -83528572 + MIR SINE MIR 102 189 -73 205 271 240 0 chr5 119556983 119557079 -83528453 - L2 LINE L2 -1 3271 3153 287 209 45 30 chr5 119557250 119557317 -83528215 + MIR SINE MIR 195 262 0 1287 221 132 39 chr5 119557359 119557821 -83527711 + MLT1D LTR MaLR 1 505 0 289 191 71 36 chr5 119558099 119558183 -83527349 - L1MC4 LINE L1 -31 8011 7925 205 269 0 0 chr5 119558187 119558239 -83527293 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 337 268 92 0 chr5 119558381 119558523 -83527009 - L1ME2 LINE L1 -38 6126 5972 749 222 32 34 chr5 119558574 119558806 -83526726 - L1ME2 LINE L1 -550 5614 5448 2398 92 0 0 chr5 119560355 119560660 -83524872 - AluSp SINE Alu -8 305 1 271 325 0 68 chr5 119561390 119561507 -83524025 + MER102b DNA MER1_type 232 340 -1 526 245 205 15 chr5 119562607 119562807 -83522725 + MIR SINE MIR 25 262 0 1097 272 54 42 chr5 119562835 119563512 -83522020 + L1MC5 LINE L1 7271 7913 -48 26 64 0 0 chr5 119563995 119564042 -83521490 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr5 119564229 119564255 -83521277 + AT_rich Low_complexity Low_complexity 1 26 0 399 322 92 6 chr5 119565935 119566109 -83519423 + MIR SINE MIR 24 212 -50 1861 166 0 3 chr5 119566395 119566711 -83518821 - AluJo SINE Alu 0 315 1 256 286 42 8 chr5 119566756 119566875 -83518657 - L1MC4 LINE L1 -1 8041 7919 1984 103 32 0 chr5 119566906 119567187 -83518345 - AluSp SINE Alu -23 290 1 10084 210 63 16 chr5 119567193 119570153 -83515379 - L1MD1 LINE L1 0 6636 3393 2071 109 0 7 chr5 119570153 119570467 -83515065 + AluSg SINE Alu 1 312 0 10084 210 63 16 chr5 119570467 119572006 -83513526 - L1MD1 LINE L1 -3243 3393 1928 17411 158 14 25 chr5 119572010 119573241 -83512291 + L1PA8 LINE L1 4 1247 -5214 207 69 0 0 chr5 119573241 119573270 -83512262 + (CAA)n Simple_repeat Simple_repeat 1 29 0 17411 158 14 25 chr5 119573270 119574143 -83511389 + L1PA8 LINE L1 1247 2128 -4333 1755 118 86 25 chr5 119574143 119574422 -83511110 - AluSq SINE Alu -17 296 1 17411 158 14 25 chr5 119574422 119576687 -83508845 + L1PA8 LINE L1 2128 4406 -2055 999 127 0 0 chr5 119576688 119576822 -83508710 + AluY SINE Alu 1 134 -177 2393 83 0 10 chr5 119576822 119577136 -83508396 + AluY SINE Alu 1 311 0 8205 116 47 75 chr5 119577141 119579249 -83506283 + L1PA8 LINE L1 4395 6487 0 404 209 0 22 chr5 119579250 119579341 -83506191 - L1MD1 LINE L1 -4602 1938 1850 * 2681 229 48 39 chr5 119579334 119579999 -83505533 - L1MD1 LINE L1 -5853 687 17 24 53 0 0 chr5 119580144 119580182 -83505350 + AT_rich Low_complexity Low_complexity 1 38 0 330 26 0 0 chr5 119580275 119580314 -83505218 + (A)n Simple_repeat Simple_repeat 1 39 0 2502 77 0 3 chr5 119580321 119580633 -83504899 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 119580904 119580927 -83504605 + AT_rich Low_complexity Low_complexity 1 23 0 295 274 123 9 chr5 119582886 119582992 -83502540 - MIR SINE MIR -59 203 86 376 62 62 25 chr5 119583384 119583465 -83502067 + CT-rich Low_complexity Low_complexity 4 87 0 1351 138 5 5 chr5 119583467 119583677 -83501855 - AluSg/x SINE Alu 0 312 103 263 288 39 44 chr5 119584310 119584429 -83501103 - MIR3 SINE MIR -16 192 69 403 224 12 31 chr5 119584914 119585075 -83500457 + (TA)n Simple_repeat Simple_repeat 2 159 0 198 118 0 0 chr5 119585160 119585194 -83500338 + (TA)n Simple_repeat Simple_repeat 2 35 0 2202 121 3 0 chr5 119586001 119586299 -83499233 + AluSp SINE Alu 3 301 -12 22 56 0 0 chr5 119586559 119586595 -83498937 + AT_rich Low_complexity Low_complexity 1 36 0 38 22 0 0 chr5 119589912 119589957 -83495575 + AT_rich Low_complexity Low_complexity 1 45 0 256 133 33 17 chr5 119590127 119590187 -83495345 + (TATG)n Simple_repeat Simple_repeat 2 62 0 226 234 78 0 chr5 119590360 119590424 -83495108 - L1ME LINE L1 -485 5636 5568 34 0 0 0 chr5 119591435 119591469 -83494063 + AT_rich Low_complexity Low_complexity 1 34 0 445 238 115 0 chr5 119592501 119592623 -83492909 + MER69 DNA AcHobo 36 171 -2355 277 211 67 58 chr5 119592623 119592727 -83492805 + MER69 DNA AcHobo 2421 2525 -1 2272 80 0 46 chr5 119593415 119593740 -83491792 - AluY SINE Alu -1 310 1 204 97 0 0 chr5 119594047 119594078 -83491454 + (CA)n Simple_repeat Simple_repeat 1 31 0 362 298 0 19 chr5 119596535 119596639 -83488893 + CT-rich Low_complexity Low_complexity 6 107 0 2290 77 0 17 chr5 119597417 119597715 -83487817 + AluY SINE Alu 14 306 -5 1637 142 23 0 chr5 119598713 119598973 -83486559 + MSTB LTR MaLR 161 426 0 860 113 161 0 chr5 119598973 119599141 -83486391 + LTR49 LTR ERV1 303 497 -98 293 111 0 19 chr5 119599145 119599199 -83486333 + LTR49-int LTR ERV1 1281 1333 -4998 5506 178 25 72 chr5 119599201 119600463 -83485069 + LTR49-int LTR ERV1 1504 2129 -2886 2325 81 3 3 chr5 119600463 119600759 -83484773 - AluSq SINE Alu -17 296 1 5506 178 25 72 chr5 119600759 119601538 -83483994 + LTR49-int LTR ERV1 2129 2943 -2072 1199 222 78 26 chr5 119601538 119601844 -83483688 + LTR49 LTR ERV1 1 322 -273 7158 116 63 30 chr5 119601848 119602364 -83483168 + LTR49-int LTR ERV1 5070 5568 -763 1880 180 3 0 chr5 119602364 119602675 -83482857 + AluJb SINE Alu 1 312 0 7158 116 63 30 chr5 119602675 119603380 -83482152 + LTR49-int LTR ERV1 5568 6331 0 3121 114 43 18 chr5 119603380 119603888 -83481644 + LTR49 LTR ERV1 1 521 -74 404 235 35 0 chr5 119603908 119603993 -83481539 - AluJ SINE Alu -30 282 195 844 120 23 30 chr5 119603993 119604126 -83481406 - AluJ SINE Alu -175 137 6 353 179 9 17 chr5 119604141 119604219 -83481313 + LTR49 LTR ERV1 510 622 0 5250 142 30 16 chr5 119605452 119606339 -83479193 - MER4D LTR ERV1 0 903 4 2479 56 0 7 chr5 119606422 119606726 -83478806 + AluY SINE Alu 1 302 -9 234 283 106 62 chr5 119607015 119607128 -83478404 + MIR SINE MIR 8 125 -137 638 262 173 9 chr5 119607239 119607453 -83478079 + MIR SINE MIR 13 261 -1 22 56 0 0 chr5 119607682 119607718 -83477814 + AT_rich Low_complexity Low_complexity 1 36 0 315 0 0 0 chr5 119608201 119608236 -83477296 + (CA)n Simple_repeat Simple_repeat 2 36 0 1553 199 3 30 chr5 119608387 119608688 -83476844 - AluJb SINE Alu -18 294 2 2604 167 37 115 chr5 119610560 119610634 -83474898 + MER39 LTR ERV1 2 80 -627 1531 173 48 7 chr5 119610634 119610906 -83474626 + AluJb SINE Alu 1 283 -29 2604 167 37 115 chr5 119610906 119611542 -83473990 + MER39 LTR ERV1 80 650 -57 2142 117 0 7 chr5 119611542 119611842 -83473690 - AluSx SINE Alu -14 298 1 2604 167 37 115 chr5 119611842 119611895 -83473637 + MER39 LTR ERV1 650 706 -1 513 310 80 13 chr5 119612394 119612620 -83472912 + LTR16A LTR ERVL 202 442 -8 817 316 46 113 chr5 119613232 119613429 -83472103 + L2 LINE L2 1861 2069 -1203 2038 120 0 0 chr5 119613429 119613712 -83471820 + AluY SINE Alu 29 311 0 817 316 46 113 chr5 119613712 119614779 -83470753 + L2 LINE L2 2069 3270 -2 1899 171 0 3 chr5 119614810 119615119 -83470413 - AluJb SINE Alu -4 308 1 1451 217 21 21 chr5 119615453 119615790 -83469742 - MER58B DNA MER1_type -1 340 4 1383 151 37 70 chr5 119617307 119617605 -83467927 - AluJb SINE Alu -23 289 2 1799 144 52 33 chr5 119621984 119622352 -83463180 + THE1C LTR MaLR 1 375 0 415 296 75 93 chr5 119622446 119622499 -83463033 + L2 LINE L2 2986 3038 -275 2069 106 17 0 chr5 119622499 119622792 -83462740 + AluSg SINE Alu 1 298 -12 415 296 75 93 chr5 119622792 119623072 -83462460 + L2 LINE L2 3038 3313 0 618 198 0 0 chr5 119623265 119623381 -83462151 + AluJb SINE Alu 189 304 -8 2504 66 0 0 chr5 119623457 119623761 -83461771 + AluY SINE Alu 2 305 -6 2909 123 40 55 chr5 119624273 119624820 -83460712 - MER34 LTR ERV1 0 542 4 662 208 50 32 chr5 119625283 119625504 -83460028 - L1MC5 LINE L1 -29 7932 7708 269 330 64 18 chr5 119627411 119627520 -83458012 + MIR SINE MIR 37 150 -112 22 0 0 0 chr5 119627816 119627838 -83457694 + AT_rich Low_complexity Low_complexity 1 22 0 2164 97 0 3 chr5 119629022 119629330 -83456202 - AluSq SINE Alu 0 307 1 2198 81 0 3 chr5 119629825 119630134 -83455398 - AluY SINE Alu 0 308 1 380 286 56 32 chr5 119630990 119631116 -83454416 - MIR SINE MIR -63 145 17 3219 162 41 64 chr5 119631230 119631960 -83453572 + L1MB7 LINE L1 5472 6184 0 2058 95 0 0 chr5 119632061 119632325 -83453207 - AluSx SINE Alu -14 298 35 2472 77 0 0 chr5 119632518 119632829 -83452703 + AluY SINE Alu 1 311 0 731 312 93 25 chr5 119632842 119633334 -83452198 + L2 LINE L2 2722 3264 -49 2404 69 7 3 chr5 119633764 119634070 -83451462 - AluSp SINE Alu -6 307 1 1298 216 58 61 chr5 119634172 119634674 -83450858 + MER39 LTR ERV1 1 585 0 251 140 20 0 chr5 119636197 119636247 -83449285 + A-rich Low_complexity Low_complexity 4 54 0 194 342 25 13 chr5 119636724 119636803 -83448729 + L2 LINE L2 3189 3268 -4 2322 276 60 21 chr5 119636905 119637777 -83447755 + L1MEc LINE L1 138 1043 -5353 231 306 52 52 chr5 119638146 119638280 -83447252 + MIR SINE MIR 17 150 -58 221 216 0 20 chr5 119638399 119638450 -83447082 + (TA)n Simple_repeat Simple_repeat 2 51 0 31 26 0 0 chr5 119640344 119640382 -83445150 + AT_rich Low_complexity Low_complexity 1 38 0 373 326 59 5 chr5 119640491 119640678 -83444854 - Charlie8 DNA MER1_type -2147 270 74 240 324 9 19 chr5 119640840 119640945 -83444587 - MIR SINE MIR -98 164 61 2150 84 0 35 chr5 119641358 119641675 -83443857 + AluSc SINE Alu 7 313 0 26 30 0 0 chr5 119642501 119642534 -83442998 + AT_rich Low_complexity Low_complexity 1 33 0 548 347 114 26 chr5 119643136 119643964 -83441568 + L2 LINE L2 2142 3051 -221 22 0 0 0 chr5 119644123 119644145 -83441387 + AT_rich Low_complexity Low_complexity 1 22 0 1364 173 0 8 chr5 119645544 119645781 -83439751 + AluJo SINE Alu 1 235 -77 366 157 118 98 chr5 119645784 119645886 -83439646 + L2 LINE L2 3210 3313 0 2125 131 0 0 chr5 119646043 119646341 -83439191 + AluSc SINE Alu 1 298 -11 2312 65 7 3 chr5 119646559 119646852 -83438680 - AluY SINE Alu -17 294 1 229 226 32 48 chr5 119647075 119647137 -83438395 - MIR SINE MIR -4 258 198 21 57 0 0 chr5 119647138 119647173 -83438359 + AT_rich Low_complexity Low_complexity 1 35 0 768 273 54 5 chr5 119647176 119647381 -83438151 - MIR SINE MIR -45 217 3 388 336 36 0 chr5 119649282 119649422 -83436110 + MIR3 SINE MIR 12 156 -52 717 105 0 0 chr5 119650202 119650307 -83435225 + L1MA3 LINE L1 6199 6303 -2 393 39 0 0 chr5 119651611 119651662 -83433870 + (TC)n Simple_repeat Simple_repeat 2 52 0 222 118 0 0 chr5 119651661 119651695 -83433837 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 202 227 11 57 chr5 119651835 119651923 -83433609 + A-rich Low_complexity Low_complexity 2 85 0 1953 157 0 0 chr5 119652963 119653262 -83432270 + AluSx SINE Alu 3 301 -11 22 0 0 0 chr5 119654772 119654794 -83430738 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr5 119655130 119655168 -83430364 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr5 119656689 119656724 -83428808 + AT_rich Low_complexity Low_complexity 1 35 0 2422 68 3 0 chr5 119656982 119657278 -83428254 - AluSp SINE Alu -16 297 1 187 244 200 9 chr5 119657775 119657890 -83427642 + L2 LINE L2 2183 2319 -995 242 330 0 28 chr5 119658615 119658724 -83426808 + GA-rich Low_complexity Low_complexity 1 106 0 309 346 254 11 chr5 119658727 119658912 -83426620 + MIR SINE MIR 20 249 -13 22 0 0 0 chr5 119658949 119658971 -83426561 + AT_rich Low_complexity Low_complexity 1 22 0 266 309 32 81 chr5 119663662 119663785 -83421747 - L2 LINE L2 -2 3270 3154 227 331 94 25 chr5 119664454 119664614 -83420918 + L2 LINE L2 1167 1337 -1977 1759 163 14 0 chr5 119665051 119665346 -83420186 - AluJb SINE Alu -12 300 2 209 327 61 56 chr5 119666085 119666299 -83419233 + L2 LINE L2 2845 3059 -213 250 342 112 7 chr5 119666390 119666542 -83418990 + L2 LINE L2 3100 3267 -5 279 341 35 92 chr5 119666792 119667106 -83418426 + L2 LINE L2 2945 3240 -32 1642 174 0 77 chr5 119667730 119667852 -83417680 + MER1B DNA MER1_type 38 168 -2544 1034 61 0 0 chr5 119667852 119668020 -83417512 + L1PA7 LINE L1 6006 6173 0 1642 174 0 77 chr5 119668020 119668223 -83417309 + MER1B DNA MER1_type 168 339 0 372 43 0 0 chr5 119668362 119668408 -83417124 + (CA)n Simple_repeat Simple_repeat 1 46 0 225 0 0 0 chr5 119668753 119668778 -83416754 + (A)n Simple_repeat Simple_repeat 1 25 0 25 65 0 0 chr5 119669473 119669519 -83416013 + AT_rich Low_complexity Low_complexity 1 46 0 330 26 0 0 chr5 119670846 119670885 -83414647 + (TAA)n Simple_repeat Simple_repeat 2 40 0 2296 68 0 45 chr5 119670970 119671278 -83414254 + AluY SINE Alu 1 294 -17 1620 215 54 9 chr5 119671884 119672233 -83413299 - MLT1A1 LTR MaLR 0 365 1 800 148 0 22 chr5 119672434 119672569 -83412963 + FLAM_C SINE Alu 1 132 -1 297 306 55 32 chr5 119672569 119673021 -83412511 + L1MEd LINE L1 1070 1564 -4746 1391 159 5 0 chr5 119673358 119673578 -83411954 + MER93b LTR ERV1 153 373 0 283 188 0 25 chr5 119673578 119673658 -83411874 + L1ME3A LINE L1 5875 5952 -218 190 276 126 35 chr5 119674059 119674146 -83411386 - MIR SINE MIR -157 105 11 22 0 0 0 chr5 119674322 119674344 -83411188 + AT_rich Low_complexity Low_complexity 1 22 0 763 260 34 8 chr5 119674997 119675262 -83410270 - L1MC4 LINE L1 -17 8025 7754 1329 199 0 0 chr5 119675307 119675533 -83409999 - AluJb SINE Alu -86 226 1 1147 237 101 26 chr5 119675563 119675951 -83409581 - L1MC4 LINE L1 -368 7674 7258 520 148 78 0 chr5 119677178 119677293 -83408239 + MER96B DNA MER1_type? 44 167 -250 471 105 88 88 chr5 119677808 119677895 -83407637 + MER53 DNA DNA 76 165 -24 2583 91 17 17 chr5 119677895 119678257 -83407275 + THE1B LTR MaLR 3 364 0 471 105 88 88 chr5 119678257 119678283 -83407249 + MER53 DNA DNA 164 189 0 2426 67 14 0 chr5 119679341 119679638 -83405894 + AluSp SINE Alu 2 302 -11 279 0 0 0 chr5 119679638 119679647 -83405885 + (CA)n Simple_repeat Simple_repeat 1 40 0 279 0 0 0 chr5 119679647 119679678 -83405854 + (CA)n Simple_repeat Simple_repeat 2 32 0 2345 92 0 0 chr5 119680221 119680516 -83405016 + AluSg SINE Alu 1 295 -15 250 303 15 0 chr5 119681214 119681280 -83404252 + L2 LINE L2 3230 3296 -17 24 77 0 0 chr5 119681724 119681776 -83403756 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 119682221 119682242 -83403290 + AT_rich Low_complexity Low_complexity 1 21 0 420 304 38 89 chr5 119683006 119683397 -83402135 + L1M4 LINE L1 4123 4493 -1653 354 23 0 0 chr5 119683481 119683524 -83402008 + (TG)n Simple_repeat Simple_repeat 1 43 0 1732 188 34 11 chr5 119684350 119684707 -83400825 + MLT1A1 LTR MaLR 1 365 0 435 19 0 0 chr5 119686149 119686201 -83399331 + (CATA)n Simple_repeat Simple_repeat 2 53 0 1942 116 3 14 chr5 119686204 119686513 -83399019 + AluSx SINE Alu 1 306 0 234 337 137 0 chr5 119687128 119687223 -83398309 + L2 LINE L2 3192 3299 -14 1690 154 51 20 chr5 119687224 119687516 -83398016 + AluJo SINE Alu 1 301 -11 589 269 80 0 chr5 119687680 119687855 -83397677 + MIR SINE MIR 74 262 0 213 320 67 0 chr5 119687918 119687993 -83397539 + L2 LINE L2 3156 3235 -37 2438 80 0 3 chr5 119688398 119688710 -83396822 - AluY SINE Alu 0 311 1 1032 245 36 4 chr5 119689631 119689880 -83395652 - MIR SINE MIR -4 258 2 363 301 20 0 chr5 119690029 119690182 -83395350 + L1ME LINE L1 5628 5783 -338 281 338 22 36 chr5 119690622 119690761 -83394771 + MIR3 SINE MIR 63 199 -9 23 54 0 0 chr5 119691931 119691968 -83393564 + AT_rich Low_complexity Low_complexity 1 37 0 2178 124 0 3 chr5 119695544 119695842 -83389690 - AluSx SINE Alu -14 298 2 24 0 0 0 chr5 119696043 119696067 -83389465 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5 119696190 119696222 -83389310 + AT_rich Low_complexity Low_complexity 1 32 0 666 268 33 11 chr5 119696360 119696543 -83388989 + MIR SINE MIR 28 214 -48 1291 260 42 62 chr5 119696588 119696769 -83388763 - MLT1H LTR MaLR -1 548 365 2168 95 59 39 chr5 119696769 119697126 -83388406 + THE1B LTR MaLR 1 364 0 1291 260 42 62 chr5 119697126 119697441 -83388091 - MLT1H LTR MaLR -184 365 62 2254 104 3 3 chr5 119697801 119698110 -83387422 - AluSq SINE Alu -4 309 1 1255 46 0 0 chr5 119698266 119698418 -83387114 + L1PA3 LINE L1 6001 6152 -3 180 0 0 0 chr5 119699758 119699778 -83385754 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 119702495 119702523 -83383009 + AT_rich Low_complexity Low_complexity 1 28 0 307 286 0 0 chr5 119702568 119702631 -83382901 + MER94 DNA DNA 72 134 0 540 258 191 5 chr5 119702674 119702883 -83382649 + MIR SINE MIR 15 262 0 222 37 0 0 chr5 119702918 119702945 -83382587 + (TA)n Simple_repeat Simple_repeat 1 27 0 1692 139 7 71 chr5 119703047 119703357 -83382175 - AluJb SINE Alu -22 290 1 337 257 295 33 chr5 119704589 119704772 -83380760 - L3 LINE CR1 -20 1557 1327 22 0 0 0 chr5 119704826 119704848 -83380684 + AT_rich Low_complexity Low_complexity 1 22 0 662 287 65 15 chr5 119704938 119705199 -83380333 - Charlie8 DNA MER1_type -2141 276 3 2025 133 17 0 chr5 119705240 119705540 -83379992 + AluSx SINE Alu 1 305 -7 22 35 0 0 chr5 119706797 119706826 -83378706 + AT_rich Low_complexity Low_complexity 1 29 0 2319 103 0 7 chr5 119708039 119708349 -83377183 - AluSc SINE Alu -1 308 1 1750 138 21 0 chr5 119708590 119708881 -83376651 - L1PB3 LINE L1 -7 6147 5851 1687 126 12 102 chr5 119709142 119709312 -83376220 + AluSx SINE Alu 1 128 -184 2375 88 0 3 chr5 119709312 119709617 -83375915 - AluY SINE Alu -7 304 1 1687 126 12 102 chr5 119709617 119709780 -83375752 + AluSx SINE Alu 128 304 -8 1787 148 178 6 chr5 119710228 119710593 -83374939 + MSTA LTR MaLR 1 428 0 648 190 52 0 chr5 119710593 119710709 -83374823 + FLAM_A SINE Alu 5 126 -7 2230 102 7 3 chr5 119711501 119711805 -83373727 + AluSc SINE Alu 1 305 -4 1730 248 106 22 chr5 119712350 119712886 -83372646 + MLT1E2 LTR MaLR 18 598 -28 876 203 0 43 chr5 119712936 119713123 -83372409 + MER3 DNA MER1_type 31 209 0 741 230 37 0 chr5 119714135 119714296 -83371236 - MLT1E1 LTR MaLR -61 593 427 510 17 0 0 chr5 119714296 119714355 -83371177 + (GGATG)n Simple_repeat Simple_repeat 5 63 0 343 342 81 12 chr5 119714433 119714536 -83370996 - L2 LINE L2 -2798 516 397 1938 225 133 35 chr5 119714536 119715132 -83370400 + MLT1E1 LTR MaLR 1 654 0 343 342 81 12 chr5 119715132 119715189 -83370343 - L2 LINE L2 -2917 397 345 231 196 0 0 chr5 119715369 119715420 -83370112 + GA-rich Low_complexity Low_complexity 2 52 0 535 135 10 0 chr5 119716351 119716447 -83369085 + L1MB4 LINE L1 6083 6179 -1 1656 106 30 0 chr5 119717585 119717822 -83367710 + AluSg/x SINE Alu 67 310 0 356 278 65 30 chr5 119719756 119719925 -83365607 - MER5B DNA MER1_type -3 175 1 2052 257 81 30 chr5 119720029 119721034 -83364498 - L2 LINE L2 0 3313 2207 27 29 0 0 chr5 119721043 119721077 -83364455 + AT_rich Low_complexity Low_complexity 1 34 0 347 301 46 81 chr5 119721456 119721629 -83363903 + L2 LINE L2 3106 3272 0 603 262 27 21 chr5 119724791 119724978 -83360554 - LTR33A LTR ERVL 0 523 336 340 325 94 31 chr5 119725056 119725247 -83360285 - LTR33A LTR ERVL -194 329 127 23 0 0 0 chr5 119726451 119726474 -83359058 + AT_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr5 119726516 119726565 -83358967 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 119726657 119726681 -83358851 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 119726863 119726884 -83358648 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr5 119727057 119727079 -83358453 + AT_rich Low_complexity Low_complexity 1 22 0 600 196 0 0 chr5 119727527 119727629 -83357903 - Tigger7 DNA MER2_type -4 2487 2386 1117 206 31 4 chr5 119727630 119727858 -83357674 - Tigger7 DNA MER2_type -499 234 1 523 173 36 36 chr5 119728246 119728356 -83357176 - MIR SINE MIR -79 183 74 32 0 0 0 chr5 119729143 119729175 -83356357 + AT_rich Low_complexity Low_complexity 1 32 0 1493 169 84 18 chr5 119729209 119729493 -83356039 - AluJo SINE Alu -5 307 5 228 226 16 0 chr5 119729703 119729765 -83355767 - L1ME LINE L1 -249 5872 5810 226 194 65 43 chr5 119729824 119729917 -83355615 - L1MC5 LINE L1 -36 7925 7831 969 236 36 46 chr5 119729925 119730205 -83355327 - AluJo SINE Alu -15 297 21 648 261 110 36 chr5 119730290 119730734 -83354798 - L1MC5 LINE L1 -172 7789 7313 1102 131 0 55 chr5 119730735 119730934 -83354598 - AluSg/x SINE Alu -9 303 116 267 324 19 0 chr5 119730934 119731042 -83354490 - L1MC4a LINE L1 -421 7387 7278 596 253 45 25 chr5 119731106 119731375 -83354157 - L1MC4 LINE L1 -744 7217 6960 1586 273 55 29 chr5 119731385 119732008 -83353524 - L1ME1 LINE L1 -5 6161 5523 1051 96 148 57 chr5 119732036 119732245 -83353287 - MER44D DNA MER2_type -107 502 5 32024 108 13 54 chr5 119732344 119738754 -83346778 - L1PA7 LINE L1 -3 6151 12 683 204 36 63 chr5 119738750 119738985 -83346547 - L1ME1 LINE L1 -663 5503 5263 * 1642 149 81 31 chr5 119738985 119739308 -83346224 + MER44D DNA MER2_type 1 609 0 683 204 36 63 chr5 119739308 119739380 -83346152 - L1ME1 LINE L1 -903 5263 5191 2102 124 0 13 chr5 119739380 119739679 -83345853 - AluSg SINE Alu -15 295 1 683 204 36 63 chr5 119739679 119739780 -83345752 - L1ME1 LINE L1 -975 5191 5032 685 193 0 0 chr5 119739780 119739925 -83345607 - L1MB7 LINE L1 -16 6168 6024 4003 210 38 15 chr5 119739932 119741515 -83344017 - L1MB7 LINE L1 -230 5944 4325 726 110 34 0 chr5 119741547 119741665 -83343867 - L1MA8 LINE L1 -3 6288 6167 3084 121 34 1 chr5 119741665 119742358 -83343174 + LTR25 LTR ERV1 2 781 -13 368 261 100 6 chr5 119742379 119742559 -83342973 - L1MB7 LINE L1 -2795 3351 3155 395 146 34 11 chr5 119742573 119742662 -83342870 - L1MA8 LINE L1 -125 6166 6076 4908 125 25 27 chr5 119742702 119743022 -83342510 - L1MA8 LINE L1 -201 6090 5771 2300 67 40 10 chr5 119743022 119743320 -83342212 - AluY SINE Alu -4 307 1 4908 125 25 27 chr5 119743320 119743925 -83341607 - L1MA8 LINE L1 -520 5771 5165 2384 250 73 31 chr5 119743958 119744417 -83341115 - L1M4 LINE L1 -2295 3851 3413 2185 102 10 16 chr5 119744417 119744720 -83340812 + AluSq SINE Alu 1 301 -12 2384 250 73 31 chr5 119744720 119745199 -83340333 - L1M4 LINE L1 -2733 3413 2873 1394 273 19 13 chr5 119745207 119745581 -83339951 - L1MEc LINE L1 -5985 411 36 356 262 69 21 chr5 119745590 119745735 -83339797 - L1MC4 LINE L1 -966 7076 6925 190 281 31 42 chr5 119746421 119746517 -83339015 - MIR3 SINE MIR -3 205 111 2157 119 7 3 chr5 119747685 119747987 -83337545 - AluSx SINE Alu -9 303 1 226 244 61 61 chr5 119748004 119748086 -83337446 - MIR SINE MIR -2 260 179 498 273 128 22 chr5 119749290 119749517 -83336015 + L2 LINE L2 1583 1833 -1481 318 26 0 0 chr5 119749543 119749582 -83335950 + (CA)n Simple_repeat Simple_repeat 2 40 0 1680 130 0 121 chr5 119749593 119749943 -83335589 - AluSx SINE Alu 0 302 1 1708 169 97 3 chr5 119749955 119750314 -83335218 - L1MB7 LINE L1 -16 6168 5770 2009 176 88 38 chr5 119750314 119750757 -83334775 + MLT1C LTR MaLR 3 467 0 1708 169 97 3 chr5 119750757 119750780 -83334752 - L1MB7 LINE L1 -414 5770 5751 381 250 268 4 chr5 119750830 119751058 -83334474 + L2 LINE L2 1918 2205 -1109 375 256 12 12 chr5 119751206 119751292 -83334240 - MER81 DNA DNA 0 114 29 195 228 140 18 chr5 119751296 119751353 -83334179 + L2 LINE L2 3250 3313 0 2009 214 5 89 chr5 119751574 119752136 -83333396 + MLT2B1 LTR ERVL 5 519 -1 331 248 9 83 chr5 119752151 119752260 -83333272 + MER5A DNA MER1_type 85 185 -4 1015 249 13 9 chr5 119753408 119753641 -83331891 + MIR SINE MIR 28 261 -1 270 202 45 79 chr5 119753920 119754009 -83331523 - MER5B DNA MER1_type -72 106 21 193 263 0 0 chr5 119754027 119754065 -83331467 + MER5A DNA MER1_type 10 47 -142 471 219 38 0 chr5 119754066 119754171 -83331361 - L1PB1 LINE L1 -1537 4609 4501 * 6512 139 1 8 chr5 119754163 119755741 -83329791 + L1PB1 LINE L1 4582 6147 -4 1172 135 5 0 chr5 119755768 119755961 -83329571 + L1PB2 LINE L1 5951 6144 -7 237 311 217 0 chr5 119755969 119756075 -83329457 + MER5A DNA MER1_type 61 189 0 1293 211 38 41 chr5 119756175 119756516 -83329016 - L1ME1 LINE L1 -5 6161 5822 6437 78 10 30 chr5 119756516 119757425 -83328107 + HERVL-A1 LTR ERVL 4764 5654 0 2920 79 67 5 chr5 119757425 119757803 -83327729 + MLT2A1 LTR ERVL 1 409 -35 500 0 17 0 chr5 119757803 119757863 -83327669 + (TA)n Simple_repeat Simple_repeat 1 61 0 2920 79 67 5 chr5 119757863 119757902 -83327630 + MLT2A1 LTR ERVL 409 444 0 1080 214 22 0 chr5 119757904 119758133 -83327399 - L1ME1 LINE L1 -341 5825 5592 574 207 37 7 chr5 119758115 119758407 -83327125 - L1ME1 LINE L1 -798 5348 4895 * 272 327 232 5 chr5 119759335 119759546 -83325986 - MIR SINE MIR 0 262 4 839 268 56 33 chr5 119760481 119760787 -83324745 + L2 LINE L2 2560 2872 -442 277 333 60 0 chr5 119760801 119760885 -83324647 + L2 LINE L2 3184 3272 0 964 156 6 12 chr5 119761117 119761277 -83324255 + AluJb SINE Alu 140 298 -14 2187 112 0 3 chr5 119761279 119761573 -83323959 + AluSx SINE Alu 1 293 -19 230 67 100 0 chr5 119761581 119761641 -83323891 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 270 264 82 55 chr5 119762262 119762372 -83323160 - L2 LINE L2 -5 3267 3155 21 57 0 0 chr5 119762942 119762977 -83322555 + AT_rich Low_complexity Low_complexity 1 35 0 341 297 153 0 chr5 119763372 119763483 -83322049 - L2 LINE L2 -11 3261 3134 1525 185 26 36 chr5 119763557 119763860 -83321672 - AluJb SINE Alu -12 300 1 465 149 0 0 chr5 119764112 119764186 -83321346 - AluJ/FRAM SINE Alu -19 293 220 2386 173 13 0 chr5 119764186 119764584 -83320948 + L1M1 LINE L1 17 419 -7146 248 292 56 0 chr5 119815973 119816045 -83269487 + MIR SINE MIR 105 180 -82 1447 109 51 72 chr5 119816192 119816468 -83269064 + L1PA11 LINE L1 5905 6174 0 35 0 0 0 chr5 119818535 119818570 -83266962 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 119819055 119819084 -83266448 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 119819577 119819605 -83265927 + AT_rich Low_complexity Low_complexity 1 28 0 1740 270 133 50 chr5 119820124 119821414 -83264118 - L1M4 LINE L1 -5145 1397 2 1922 112 0 35 chr5 119823068 119823381 -83262151 - AluSq SINE Alu -1 312 11 22 35 0 0 chr5 119823847 119823876 -83261656 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 119824113 119824153 -83261379 + AT_rich Low_complexity Low_complexity 1 40 0 2159 113 17 3 chr5 119824504 119824805 -83260727 + AluSc SINE Alu 1 305 -4 231 219 0 0 chr5 119825542 119825583 -83259949 + MIR SINE MIR 106 146 -62 1748 165 7 13 chr5 119826384 119826687 -83258845 - AluJo SINE Alu -11 301 1 210 233 0 0 chr5 119827282 119827342 -83258190 + (TAA)n Simple_repeat Simple_repeat 1 60 0 588 260 116 11 chr5 119827356 119827537 -83257995 - MIR SINE MIR -12 250 51 5337 112 67 22 chr5 119827898 119828813 -83256719 - Tigger1 DNA MER2_type -248 2170 1215 311 130 0 56 chr5 119828816 119828870 -83256662 - Tigger1 DNA MER2_type -1129 1289 1239 241 146 0 0 chr5 119828896 119828944 -83256588 - Tigger1 DNA MER2_type -2205 213 166 7725 188 12 3 chr5 119828948 119831413 -83254119 + L1PA15 LINE L1 3677 6165 0 284 176 68 0 chr5 119831431 119831505 -83254027 - Tigger1 DNA MER2_type -2231 187 109 309 198 11 22 chr5 119831872 119831963 -83253569 + (TA)n Simple_repeat Simple_repeat 1 90 0 2120 130 0 3 chr5 119832112 119832419 -83253113 - AluSx SINE Alu -6 306 1 2103 76 43 10 chr5 119833059 119833360 -83252172 - AluY SINE Alu 0 311 1 205 362 34 40 chr5 119833526 119833675 -83251857 - L2 LINE L2 -200 3072 2925 2230 98 10 0 chr5 119833756 119834051 -83251481 + AluSp SINE Alu 1 298 -15 562 325 152 34 chr5 119834069 119834536 -83250996 - L2 LINE L2 -527 2787 2266 608 241 44 98 chr5 119835389 119835817 -83249715 + L1M4 LINE L1 4407 4811 -1335 589 203 84 0 chr5 119835966 119836109 -83249423 - MER104 DNA Tc2 -25 155 1 216 277 224 7 chr5 119836372 119836505 -83249027 - MIR SINE MIR -26 182 25 419 289 176 0 chr5 119836930 119837134 -83248398 - MIR SINE MIR 0 262 23 1017 200 108 0 chr5 119837296 119837546 -83247986 - L1ME2 LINE L1 -301 5863 5587 518 235 134 13 chr5 119837560 119837709 -83247823 - FAM SINE Alu -8 167 1 512 152 0 0 chr5 119839671 119839750 -83245782 - AluS SINE Alu -234 79 1 2368 62 3 0 chr5 119839990 119840295 -83245237 - MER11C LTR ERVK 0 1071 766 1076 66 0 0 chr5 119840295 119840462 -83245070 + L1PA3 LINE L1 6002 6168 0 427 293 107 66 chr5 119840634 119841150 -83244382 + L1M4 LINE L1 2945 3481 -2665 6101 44 15 1 chr5 119841182 119841927 -83243605 - MER11C LTR ERVK -316 755 1 378 240 67 0 chr5 119842011 119842115 -83243417 - MIR SINE MIR -105 157 47 329 283 131 7 chr5 119842738 119842883 -83242649 - MIR SINE MIR -78 184 22 313 333 61 0 chr5 119844477 119844609 -83240923 + HAL1 LINE L1 1658 1797 -710 280 294 38 31 chr5 119844612 119844772 -83240760 + HAL1 LINE L1 1868 2028 -479 1112 113 65 0 chr5 119844806 119844991 -83240541 - Tigger1 DNA MER2_type -1 2417 2221 6980 253 75 53 chr5 119844994 119847619 -83237913 + L1MA5 LINE L1 10 2690 -4159 4826 202 30 50 chr5 119847724 119849907 -83235625 + L1MA5 LINE L1 4765 6867 -6 452 298 20 20 chr5 119850614 119850765 -83234767 - L2 LINE L2 -4 3309 3159 1849 198 52 68 chr5 119850815 119851004 -83234528 + L1ME2 LINE L1 5131 5322 -842 1954 114 0 57 chr5 119851004 119851319 -83234213 + AluSx SINE Alu 1 297 -15 1849 198 52 68 chr5 119851319 119851869 -83233663 + L1ME2 LINE L1 5322 5847 -317 254 328 44 33 chr5 119851914 119852094 -83233438 + MLT1K LTR MaLR 371 552 -36 202 348 106 21 chr5 119852549 119852690 -83232842 - MIR SINE MIR -8 254 102 233 267 148 37 chr5 119853548 119853683 -83231849 - MIR SINE MIR -48 214 65 316 181 0 78 chr5 119855384 119855500 -83230032 + (CA)n Simple_repeat Simple_repeat 2 108 0 1402 97 0 15 chr5 119855566 119855761 -83229771 + AluSg/x SINE Alu 100 291 -21 2003 126 3 13 chr5 119857294 119857595 -83227937 - AluSx SINE Alu -2 310 13 216 0 0 0 chr5 119857641 119857665 -83227867 + (A)n Simple_repeat Simple_repeat 1 24 0 240 35 0 0 chr5 119857850 119857879 -83227653 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 56 0 0 chr5 119860045 119860081 -83225451 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 119861023 119861052 -83224480 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 119861291 119861334 -83224198 + AT_rich Low_complexity Low_complexity 1 43 0 2217 88 17 3 chr5 119861686 119861980 -83223552 + AluSc SINE Alu 1 298 -11 21 36 0 0 chr5 119863103 119863131 -83222401 + AT_rich Low_complexity Low_complexity 1 28 0 880 117 0 29 chr5 119864995 119865132 -83220400 + FLAM_C SINE Alu 1 133 0 210 319 138 11 chr5 119865522 119865616 -83219916 - L2 LINE L2 -16 3256 3151 350 294 109 1 chr5 119865731 119865935 -83219597 + L1ME2 LINE L1 5643 5866 -298 280 231 46 15 chr5 119866776 119866841 -83218691 + L2 LINE L2 3205 3271 -1 525 233 241 3 chr5 119867330 119867533 -83217999 + MIR SINE MIR 5 248 -14 2004 193 11 3 chr5 119867595 119867957 -83217575 + MLT1A1 LTR MaLR 1 365 0 309 296 62 75 chr5 119868631 119868857 -83216675 - MIR SINE MIR -10 252 30 2359 97 0 13 chr5 119869775 119870085 -83215447 + AluSg SINE Alu 1 306 -4 285 357 60 10 chr5 119871380 119871579 -83213953 - MIR SINE MIR -1 261 53 1608 181 77 9 chr5 119871778 119872104 -83213428 - MER7A DNA MER2_type 0 346 1 1775 192 28 0 chr5 119872210 119872574 -83212958 + L1MB7 LINE L1 5795 6168 -16 1951 142 0 3 chr5 119873540 119873829 -83211703 - AluJo SINE Alu -24 288 1 456 204 253 42 chr5 119873874 119874163 -83211369 + L1ME4a LINE L1 5770 6119 -2 449 286 50 0 chr5 119874289 119874408 -83211124 + L2 LINE L2 3188 3312 -1 692 203 163 23 chr5 119874511 119874812 -83210720 + Charlie4a DNA MER1_type 1 343 -165 949 262 118 12 chr5 119874815 119875147 -83210385 + HAL1 LINE L1 201 567 -1940 * 1564 256 72 11 chr5 119875139 119875667 -83209865 + HAL1 LINE L1 1254 1813 -694 455 222 111 0 chr5 119875912 119876056 -83209476 + HAL1 LINE L1 2127 2286 -221 2334 92 0 0 chr5 119877225 119877530 -83208002 - AluSg SINE Alu -3 307 3 7215 209 55 48 chr5 119877827 119878638 -83206894 + L1MC1 LINE L1 17 821 -5605 1292 199 0 4 chr5 119878638 119878874 -83206658 - MER46A DNA MER2_type -1 235 1 7215 209 55 48 chr5 119878874 119879984 -83205548 + L1MC1 LINE L1 821 2119 -4307 1881 127 33 0 chr5 119879984 119880306 -83205226 - AluSx SINE Alu 0 331 1 7215 209 55 48 chr5 119880306 119881019 -83204513 + L1MC1 LINE L1 2119 2825 -3601 3500 187 35 13 chr5 119881016 119881705 -83203827 + L1MC1 LINE L1 5887 6590 -23 * 2104 250 34 16 chr5 119881882 119882446 -83203086 + L1M4 LINE L1 2301 2882 -3264 569 47 0 47 chr5 119882446 119882532 -83203000 - L1PA6 LINE L1 -3 6151 6070 2104 250 34 16 chr5 119882532 119882674 -83202858 + L1M4 LINE L1 2882 3020 -3126 * 3133 236 42 28 chr5 119882672 119883608 -83201924 - L1M4c LINE L1 -1752 4892 3944 622 161 210 0 chr5 119883610 119883734 -83201798 - FAM SINE Alu -10 175 26 3373 250 53 14 chr5 119883734 119884888 -83200644 - L1M4c LINE L1 -2690 3954 2756 * 4291 190 45 39 chr5 119884882 119885981 -83199551 - L1M4c LINE L1 -4563 2083 978 1370 276 72 84 chr5 119885994 119886879 -83198653 - L1M4c LINE L1 -5666 876 2 21 0 0 0 chr5 119887292 119887313 -83198219 + AT_rich Low_complexity Low_complexity 1 21 0 455 243 61 27 chr5 119887851 119887999 -83197533 - MER112 DNA MER1_type -36 224 72 325 265 12 12 chr5 119889894 119889977 -83195555 + MER21B LTR ERV1 14 96 -767 508 266 79 7 chr5 119890017 119890156 -83195376 + MER21B LTR ERV1 100 248 -615 979 258 49 40 chr5 119890221 119890570 -83194962 + MER21A LTR ERV1 506 857 -74 941 230 58 0 chr5 119891623 119891814 -83193718 - MER63A DNA MER1_type -5 205 4 567 283 12 12 chr5 119892070 119892236 -83193296 + MIR SINE MIR 97 262 0 1409 203 58 6 chr5 119893148 119893507 -83192025 + L1MD3 LINE L1 7526 7903 -92 3517 100 27 96 chr5 119893515 119894235 -83191297 + MER4A LTR ERV1 1 779 0 364 200 0 0 chr5 119894235 119894305 -83191227 + L1MD3 LINE L1 7904 7973 -22 46 54 0 0 chr5 119894317 119894391 -83191141 + AT_rich Low_complexity Low_complexity 1 74 0 2005 164 72 46 chr5 119894582 119894996 -83190536 - MER6A DNA MER2_type -180 425 1 2162 131 0 0 chr5 119895185 119895483 -83190049 + AluSg SINE Alu 1 298 -12 336 323 57 44 chr5 119895509 119895837 -83189695 + L1ME LINE L1 179 752 -5882 389 250 50 30 chr5 119896151 119896251 -83189281 - MER58A DNA MER1_type -2 105 4 979 214 20 30 chr5 119896254 119896549 -83188983 + L1ME LINE L1 1104 1395 -5147 872 107 33 0 chr5 119896549 119896670 -83188862 + LTR55 LTR ERV 1 125 -423 * 1144 216 19 15 chr5 119896667 119896926 -83188606 + LTR55 LTR ERV 282 541 -7 2621 224 88 10 chr5 119896930 119897846 -83187686 + L1ME LINE L1 1391 2463 -4183 29 28 0 0 chr5 119897853 119897889 -83187643 + AT_rich Low_complexity Low_complexity 1 36 0 400 168 29 0 chr5 119897947 119898120 -83187412 + (TA)n Simple_repeat Simple_repeat 2 179 0 1302 222 86 61 chr5 119898167 119898355 -83187177 + L1ME LINE L1 2491 2673 -3971 1840 163 0 10 chr5 119898355 119898649 -83186883 + AluJb SINE Alu 1 291 -21 1302 222 86 61 chr5 119898649 119899112 -83186420 + L1ME LINE L1 2673 3123 -3521 1820 166 0 13 chr5 119899112 119899419 -83186113 + AluJb SINE Alu 1 303 -9 1302 222 86 61 chr5 119899419 119899792 -83185740 + L1ME LINE L1 3123 3716 -2928 1381 155 24 84 chr5 119899794 119900090 -83185442 + AluJo SINE Alu 1 278 -34 252 0 0 0 chr5 119900090 119900118 -83185414 + (CA)n Simple_repeat Simple_repeat 1 28 0 3535 221 77 19 chr5 119900128 119901226 -83184306 + L1ME LINE L1 3747 4908 -1736 1059 220 34 11 chr5 119901227 119901495 -83184037 - L1M4b LINE L1 -5238 1621 1348 828 109 219 0 chr5 119901506 119901643 -83183889 - AluSc SINE Alu -8 301 135 313 256 110 46 chr5 119902199 119902448 -83183084 - L1M4b LINE L1 -6257 598 21 252 77 0 0 chr5 119903044 119903083 -83182449 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 282 231 55 33 chr5 119903214 119903305 -83182227 - L3 LINE CR1 -293 1284 1192 340 248 18 46 chr5 119903455 119903564 -83181968 - L2 LINE L2 0 3313 3208 209 292 0 28 chr5 119904721 119904793 -83180739 + MIR SINE MIR 54 123 -85 * 223 325 0 12 chr5 119904788 119904868 -83180664 + L2 LINE L2 3145 3223 -49 370 328 40 0 chr5 119904873 119904998 -83180534 + MIR SINE MIR 120 249 -13 358 283 110 102 chr5 119905566 119905729 -83179803 - L1M2 LINE L1 -5702 1147 987 300 70 0 0 chr5 119905729 119905772 -83179760 + (CCG)n Simple_repeat Simple_repeat 3 45 0 358 283 110 102 chr5 119905772 119906019 -83179513 - L1M2 LINE L1 -5862 987 744 222 37 0 0 chr5 119906019 119906046 -83179486 + (CGG)n Simple_repeat Simple_repeat 2 28 0 358 283 110 102 chr5 119906046 119906368 -83179164 - L1M2 LINE L1 -6105 744 408 529 235 134 13 chr5 119908523 119908672 -83176860 + FAM SINE Alu 1 167 -8 1150 192 90 0 chr5 119908686 119908941 -83176591 + L1ME2 LINE L1 5587 5864 -300 200 279 38 38 chr5 119909060 119909139 -83176393 - MIR3 SINE MIR -45 163 85 2214 214 61 35 chr5 119909599 119910192 -83175340 + MER90 LTR ERV1 7 614 0 347 206 240 14 chr5 119910211 119910357 -83175175 + L2 LINE L2 3054 3232 -81 2161 138 3 0 chr5 119910477 119910789 -83174743 + AluSq SINE Alu 1 313 0 198 287 17 70 chr5 119911516 119911631 -83173901 + L2 LINE L2 2955 3063 -250 1457 171 0 30 chr5 119911791 119912054 -83173478 + AluJb SINE Alu 36 290 -22 1753 191 24 80 chr5 119912068 119912134 -83173398 + MLT1E1 LTR MaLR 206 274 -380 1896 106 50 30 chr5 119912134 119912436 -83173096 + AluSx SINE Alu 1 308 -4 1753 191 24 80 chr5 119912436 119912819 -83172713 + MLT1E1 LTR MaLR 274 630 -24 2222 124 16 0 chr5 119913275 119913582 -83171950 - AluSx SINE Alu 0 312 1 2174 105 3 0 chr5 119913623 119913917 -83171615 - AluSp SINE Alu -18 295 1 1721 182 17 7 chr5 119914750 119915041 -83170491 - AluJb SINE Alu -18 294 1 273 29 0 0 chr5 119915274 119915308 -83170224 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 303 28 0 0 chr5 119915307 119915343 -83170189 + (TG)n Simple_repeat Simple_repeat 2 37 0 590 212 35 7 chr5 119916587 119916740 -83168792 + L1ME2 LINE L1 5369 5528 -638 479 211 11 0 chr5 119916740 119916830 -83168702 - AluJ/FLAM SINE Alu -221 91 1 1506 252 132 25 chr5 119916833 119917401 -83168131 + L1ME2 LINE L1 5527 6155 -9 426 271 77 59 chr5 119917444 119917783 -83167749 + L1MC4 LINE L1 7558 7902 -140 2120 156 48 37 chr5 119917811 119918346 -83167186 - MLT2A2 LTR ERVL 0 554 1 227 253 69 0 chr5 119918484 119918571 -83166961 - L1 LINE L1 -1331 4815 4723 1632 196 27 3 chr5 119918727 119919023 -83166509 - AluJb SINE Alu -9 303 1 847 143 0 8 chr5 119919267 119919400 -83166132 + FLAM_C SINE Alu 2 133 0 473 330 37 11 chr5 119919785 119919973 -83165559 - L1 LINE L1 -2235 3911 3719 1185 190 166 8 chr5 119920178 119920431 -83165101 - AluSg SINE Alu -7 293 1 466 281 85 36 chr5 119920535 119921038 -83164494 + L1MC/D LINE L1 5266 5780 -635 464 254 65 6 chr5 119921514 119921683 -83163849 + MARNA DNA Mariner 291 469 -117 369 0 0 0 chr5 119921748 119921789 -83163743 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2295 75 0 3 chr5 119921791 119922073 -83163459 - AluY SINE Alu -30 281 1 1871 128 4 14 chr5 119922213 119922522 -83163010 - AluSc SINE Alu 0 306 1 278 235 173 12 chr5 119922685 119922766 -83162766 + L2 LINE L2 3148 3241 -31 389 236 71 52 chr5 119922851 119923118 -83162414 - LTR37A LTR ERV1 0 426 155 14448 115 21 32 chr5 119923198 119925841 -83159691 + L1PA7 LINE L1 5 2689 -3772 3741 94 4 4 chr5 119925841 119926352 -83159180 - MER9 LTR ERVK 0 511 1 14448 115 21 32 chr5 119926352 119927175 -83158357 + L1PA7 LINE L1 2689 3520 -2941 441 0 0 0 chr5 119927177 119927226 -83158306 + (TTA)n Simple_repeat Simple_repeat 3 51 0 2152 56 0 0 chr5 119927226 119927494 -83158038 - L1PA6 LINE L1 -18 6136 5869 1329 58 0 0 chr5 119927494 119927685 -83157847 - L1PA7 LINE L1 -2745 3716 3526 14188 80 6 0 chr5 119927685 119930421 -83155111 + L1PA7 LINE L1 3704 6469 0 744 228 90 39 chr5 119930596 119930971 -83154561 + MER39 LTR ERV1 126 707 0 247 174 0 0 chr5 119931042 119931088 -83154444 + MER58 DNA MER1_type 2363 2408 -12 1247 252 58 89 chr5 119931191 119931981 -83153551 - MER31-int LTR ERV1 -844 4092 3327 1379 177 101 11 chr5 119932268 119932545 -83152987 + AluJo SINE Alu 1 302 -10 391 259 23 87 chr5 119932586 119932852 -83152680 - MER31-int LTR ERV1 -1870 3066 2818 21 0 0 0 chr5 119932890 119932911 -83152621 + AT_rich Low_complexity Low_complexity 1 21 0 320 256 0 66 chr5 119932915 119933052 -83152480 - MER31-int LTR ERV1 -2145 2791 2664 1116 213 87 0 chr5 119933432 119933709 -83151823 + Charlie1b DNA MER1_type 14 314 -209 1908 148 20 3 chr5 119933709 119934006 -83151526 + AluJo SINE Alu 1 302 -10 293 210 109 17 chr5 119934684 119934803 -83150729 + LTR48 LTR ERV1 608 737 -50 180 0 0 0 chr5 119935460 119935480 -83150052 + (A)n Simple_repeat Simple_repeat 1 20 0 430 244 93 62 chr5 119935615 119935873 -83149659 + LTR48 LTR ERV1 522 787 0 279 156 8 141 chr5 119935879 119935943 -83149589 - MER31-int LTR ERV1 -3516 1420 1380 1497 89 8 78 chr5 119935943 119936200 -83149332 - L1PA6 LINE L1 0 6154 5916 279 156 8 141 chr5 119936200 119936263 -83149269 - MER31-int LTR ERV1 -3556 1380 1310 2963 162 71 2 chr5 119936423 119936960 -83148572 - LTR39 LTR ERV1 0 783 210 449 214 11 77 chr5 119936982 119937021 -83148511 - L1MB8 LINE L1 -11 6167 6127 2033 125 30 3 chr5 119937021 119937317 -83148215 - AluJb SINE Alu -8 304 1 449 214 11 77 chr5 119937317 119937459 -83148073 - L1MB8 LINE L1 -51 6127 5998 1126 126 42 0 chr5 119937464 119937655 -83147877 - LTR39 LTR ERV1 -552 231 33 2322 75 7 3 chr5 119938117 119938412 -83147120 - AluSg SINE Alu -14 296 1 987 223 46 9 chr5 119938419 119938746 -83146786 - LTR37A LTR ERV1 -11 415 77 1084 191 9 26 chr5 119938816 119939047 -83146485 + MER87 LTR ERV1 1 227 -314 1415 229 20 0 chr5 119939097 119939403 -83146129 + MER87 LTR ERV1 230 541 0 2493 126 5 41 chr5 119939933 119940371 -83145161 + MER65A LTR ERV1 1 422 -23 768 90 49 0 chr5 119940368 119940490 -83145042 + MER2 DNA MER2_type 138 265 -80 * 24 67 0 0 chr5 119940772 119940817 -83144715 + AT_rich Low_complexity Low_complexity 1 45 0 1704 168 41 29 chr5 119940983 119941323 -83144209 - MER2 DNA MER2_type 0 344 1 2414 138 38 73 chr5 119941449 119942072 -83143460 + MER4B LTR ERV1 1 774 -5 1487 145 17 74 chr5 119942086 119942438 -83143094 + MER31B LTR ERV1 1 332 -134 1183 218 116 68 chr5 119942543 119943264 -83142268 + MER52A LTR ERV1 119 1755 0 942 164 11 0 chr5 119943264 119943453 -83142079 + L1P LINE L1 4966 5156 -990 674 118 24 24 chr5 119943453 119943580 -83141952 + L1PA14 LINE L1 6035 6161 0 270 0 0 0 chr5 119944325 119944355 -83141177 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 414 0 0 0 chr5 119944354 119944400 -83141132 + (CA)n Simple_repeat Simple_repeat 1 46 0 586 287 213 15 chr5 119945367 119945854 -83139678 - L2 LINE L2 0 3313 2740 2623 155 37 8 chr5 119945918 119946407 -83139125 - MER41B LTR ERV1 0 635 133 1123 189 3 86 chr5 119946387 119946678 -83138854 - MER41C LTR ERV1 -287 267 1 * 1970 158 3 3 chr5 119946717 119947021 -83138511 - AluJb SINE Alu -4 308 5 1074 195 56 0 chr5 119947069 119947300 -83138232 - MER58B DNA MER1_type -6 335 92 2788 10 0 0 chr5 119947330 119947632 -83137900 + AluYa5 SINE Alu 1 302 -9 25061 137 20 11 chr5 119947633 119952778 -83132754 - L1PA8A LINE L1 -28 6418 1151 219 88 0 0 chr5 119952778 119952812 -83132720 + (TTG)n Simple_repeat Simple_repeat 3 36 0 25061 137 20 11 chr5 119952812 119953970 -83131562 - L1PA8A LINE L1 -5295 1151 4 404 205 0 123 chr5 119953970 119954040 -83131492 - MER58B DNA MER1_type -234 107 57 703 173 15 45 chr5 119954040 119954173 -83131359 + FLAM_A SINE Alu 3 131 -2 404 205 0 123 chr5 119954173 119954224 -83131308 - MER58B DNA MER1_type -284 57 1 1876 149 7 20 chr5 119954417 119954712 -83130820 + AluJo SINE Alu 1 291 -21 482 263 155 47 chr5 119955181 119955459 -83130073 + Charlie2a DNA MER1_type 213 520 -2262 * 633 252 68 0 chr5 119955428 119955678 -83129854 + Charlie2a DNA MER1_type 744 1010 -1852 232 239 76 0 chr5 119955693 119955785 -83129747 + Charlie2a DNA MER1_type 2759 2857 -5 4330 106 40 3 chr5 119955818 119956500 -83129032 + L1PA16 LINE L1 5457 6163 -3 552 244 72 84 chr5 119956792 119957250 -83128282 - MER39 LTR ERV1 -42 636 49 407 341 42 24 chr5 119957272 119957439 -83128093 - MIR SINE MIR -73 189 20 607 93 27 0 chr5 119958412 119958510 -83127022 + L1PA7 LINE L1 6032 6145 -9 45 69 0 0 chr5 119958510 119958597 -83126935 + AT_rich Low_complexity Low_complexity 1 87 0 773 174 102 47 chr5 119958607 119958711 -83126821 - MER39 LTR ERV1 -67 640 543 1542 185 33 17 chr5 119958711 119959013 -83126519 - AluJo SINE Alu -5 307 1 773 174 102 47 chr5 119959013 119959143 -83126389 - MER39 LTR ERV1 -164 543 393 572 196 0 0 chr5 119959165 119959267 -83126265 + Ricksha DNA DNA 2 103 -1151 1126 85 30 0 chr5 119959279 119959444 -83126088 + Ricksha DNA DNA 239 408 -846 4166 141 8 20 chr5 119959445 119959744 -83125788 + Ricksha DNA DNA 2501 2802 -449 1611 196 6 25 chr5 119959744 119960061 -83125471 - AluJo SINE Alu -1 311 1 4166 141 8 20 chr5 119960061 119960513 -83125019 + Ricksha DNA DNA 2802 3243 -8 416 235 108 59 chr5 119960527 119960756 -83124776 - MER39 LTR ERV1 -320 387 1 189 74 0 0 chr5 119961219 119961246 -83124286 + (CA)n Simple_repeat Simple_repeat 1 27 0 306 222 37 93 chr5 119961252 119961360 -83124172 - MER5B DNA MER1_type -76 102 1 186 158 26 0 chr5 119961360 119961396 -83124136 + MER5C DNA MER1_type 75 111 -213 1546 211 3 3 chr5 119961398 119961687 -83123845 + AluJo SINE Alu 3 291 -21 21424 129 15 64 chr5 119961700 119966005 -83119527 + L1P LINE L1 12 4102 -2044 1437 84 4 26 chr5 119966005 119966231 -83119301 - pTR5 LTR ERV1 -2046 392 172 278 235 31 20 chr5 119966234 119966332 -83119200 - LTR30 LTR ERV1 -80 642 544 4043 133 104 46 chr5 119966332 119967323 -83118209 - pTR5 LTR ERV1 -413 2025 750 8846 99 11 0 chr5 119967323 119969376 -83116156 + L1PA7 LINE L1 4093 6154 0 23 33 0 0 chr5 119969431 119969461 -83116071 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 119969499 119969535 -83115997 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5 119969608 119969638 -83115894 + AT_rich Low_complexity Low_complexity 1 30 0 1984 141 0 7 chr5 119969639 119969930 -83115602 - AluJo SINE Alu -23 289 1 204 200 0 0 chr5 119970017 119970057 -83115475 - L2 LINE L2 -364 2950 2911 312 266 177 6 chr5 119970195 119970353 -83115179 + LTR33 LTR ERVL 337 521 0 829 266 86 17 chr5 119970566 119970856 -83114676 - MLT2E LTR ERVL -12 616 307 1040 61 0 88 chr5 119971492 119971839 -83113693 + AluSc SINE Alu 1 334 0 367 234 28 0 chr5 119971998 119972105 -83113427 + L1M4 LINE L1 4210 4319 -1827 627 165 0 41 chr5 119972340 119972461 -83113071 + FLAM_A SINE Alu 27 142 0 39 0 0 0 chr5 119972766 119972805 -83112727 + AT_rich Low_complexity Low_complexity 1 39 0 1310 153 118 35 chr5 119972805 119973060 -83112472 - AluJo SINE Alu -22 290 15 581 154 0 41 chr5 119973066 119973189 -83112343 - L1MD3 LINE L1 -12 7983 7866 294 247 13 0 chr5 119973205 119973282 -83112250 - LTR16C LTR ERVL -104 387 310 2065 202 70 33 chr5 119973293 119973893 -83111639 - L1MC4a LINE L1 -98 7710 7089 1149 191 4 42 chr5 119975375 119975611 -83109921 - AluJb SINE Alu 0 312 86 506 156 0 0 chr5 119976748 119976825 -83108707 + AluJ/FLAM SINE Alu 1 77 -235 1614 255 37 70 chr5 119977020 119977473 -83108059 + HAL1 LINE L1 503 970 -1537 2334 118 19 25 chr5 119977473 119977839 -83107693 + THE1B LTR MaLR 1 364 0 12124 86 2 1 chr5 119977839 119979417 -83106115 + THE1B-int LTR MaLR 1 1580 0 2154 148 34 14 chr5 119979417 119979774 -83105758 + THE1B LTR MaLR 1 364 0 1614 255 37 70 chr5 119979774 119979871 -83105661 + HAL1 LINE L1 968 1067 -1440 12784 97 2 1 chr5 119979871 119982465 -83103067 - L1PA7 LINE L1 -4 6150 3552 1614 255 37 70 chr5 119982465 119982695 -83102837 + HAL1 LINE L1 1067 1260 -1247 1044 295 102 8 chr5 119983037 119983420 -83102112 + MLT1G1 LTR MaLR 108 526 -69 243 293 52 0 chr5 119983420 119983536 -83101996 - L1M4 LINE L1 -2254 3892 3771 182 270 14 0 chr5 119983909 119983983 -83101549 + CT-rich Low_complexity Low_complexity 2 76 0 23 33 0 0 chr5 119984077 119984107 -83101425 + AT_rich Low_complexity Low_complexity 1 30 0 279 333 114 8 chr5 119984933 119985056 -83100476 - L2 LINE L2 -3 3269 3134 284 203 0 178 chr5 119985196 119985314 -83100218 + MER102a DNA MER1_type 231 327 -3 1546 165 39 42 chr5 119985394 119985679 -83099853 + AluJo SINE Alu 1 284 -28 405 0 0 0 chr5 119985679 119985724 -83099808 + (CA)n Simple_repeat Simple_repeat 2 46 0 227 326 51 0 chr5 119986306 119986444 -83099088 - L1M4 LINE L1 -3336 2810 2666 4100 156 34 20 chr5 119986458 119986982 -83098550 + Tigger7 DNA MER2_type 17 555 -1932 1932 91 4 4 chr5 119986982 119987235 -83098297 + AluSx SINE Alu 54 306 -6 4100 156 34 20 chr5 119987235 119987454 -83098078 + Tigger7 DNA MER2_type 555 770 -1717 1586 135 138 6 chr5 119987454 119987781 -83097751 + Tigger7 DNA MER2_type 2118 2487 0 1434 199 63 40 chr5 119987779 119988299 -83097233 - MLT1E3 LTR MaLR 0 624 1 * 340 259 71 9 chr5 119988481 119988593 -83096939 - L1M4 LINE L1 -3764 2382 2264 619 298 59 32 chr5 119988612 119988984 -83096548 - MLT1H LTR MaLR -2 547 166 794 300 76 22 chr5 119989651 119990008 -83095524 + MLT1J LTR MaLR 128 503 -8 180 261 0 0 chr5 119990182 119990228 -83095304 + L2 LINE L2 3227 3272 0 256 327 36 18 chr5 119990264 119990374 -83095158 + L2 LINE L2 2946 3057 -215 232 150 0 0 chr5 119990577 119990616 -83094916 - MLT2D LTR ERVL -10 510 472 5819 101 20 65 chr5 119990616 119991160 -83094372 - Tigger4(Zombi) DNA MER2_type -2 2729 2162 717 213 0 0 chr5 119991160 119991287 -83094245 - FLAM_A SINE Alu -6 127 1 5819 101 20 65 chr5 119991287 119991494 -83094038 - Tigger4(Zombi) DNA MER2_type -569 2162 1947 1955 170 7 0 chr5 119991494 119991794 -83093738 - AluJb SINE Alu -10 302 1 5819 101 20 65 chr5 119991794 119992017 -83093515 - Tigger4(Zombi) DNA MER2_type -784 1947 1804 2073 136 7 3 chr5 119992017 119992319 -83093213 - AluSq SINE Alu -10 303 1 5819 101 20 65 chr5 119992319 119992425 -83093107 - Tigger4(Zombi) DNA MER2_type -927 1804 1695 818 186 71 0 chr5 119992442 119992625 -83092907 - Tigger4(Zombi) DNA MER2_type -2534 197 2 2252 130 41 112 chr5 119992647 119992981 -83092551 - Tigger1 DNA MER2_type 0 2418 2062 2365 91 7 3 chr5 119992981 119993290 -83092242 - AluSg SINE Alu 0 310 1 2252 130 41 112 chr5 119993290 119993339 -83092193 - Tigger1 DNA MER2_type -356 2062 2011 2299 87 0 0 chr5 119993339 119993627 -83091905 - AluY SINE Alu -15 296 9 2252 130 41 112 chr5 119993627 119993750 -83091782 - Tigger1 DNA MER2_type -407 2011 1947 596 144 0 10 chr5 119993752 119993849 -83091683 - Tigger1 DNA MER2_type -2298 120 25 189 74 0 0 chr5 119993857 119993884 -83091648 + (CA)n Simple_repeat Simple_repeat 2 28 0 1883 180 11 3 chr5 119993884 119994240 -83091292 - MLT2D LTR ERVL -55 359 1 1163 188 240 19 chr5 119994274 119994582 -83090950 - MSTB LTR MaLR 0 426 51 189 344 16 0 chr5 119995402 119995466 -83090066 - L2 LINE L2 -18 3295 3231 573 238 229 8 chr5 119995635 119995879 -83089653 + LTR16C LTR ERVL 194 491 0 348 277 96 42 chr5 119995879 119996139 -83089393 - L2 LINE L2 -72 3241 2968 606 284 5 9 chr5 119996871 119997093 -83088439 + L1PB3 LINE L1 -656 4294966860 -6640 * 13245 192 23 28 chr5 119997063 120001239 -83084293 + L1PB3 LINE L1 1 4193 -2018 1947 160 0 11 chr5 120001239 120001526 -83084006 + AluJb SINE Alu 1 284 -28 13245 192 23 28 chr5 120001526 120002558 -83082974 + L1PB3 LINE L1 4193 4816 -1395 2122 96 3 46 chr5 120002558 120002861 -83082671 + AluSc SINE Alu 1 290 -19 13245 192 23 28 chr5 120002861 120004087 -83081445 + L1PB3 LINE L1 4816 6046 -165 3496 179 24 2 chr5 120004110 120004964 -83080568 - L1MD2 LINE L1 -364 5995 5122 206 438 69 0 chr5 120005556 120005716 -83079816 + L2 LINE L2 2578 2748 -566 267 285 63 0 chr5 120005795 120005931 -83079601 + L1 LINE L1 3340 3482 -2664 2099 111 4 0 chr5 120006646 120006949 -83078583 + AluSg SINE Alu 1 304 0 781 284 121 25 chr5 120007020 120007533 -83077999 + L2 LINE L2 2709 3293 -20 221 102 61 82 chr5 120007534 120007583 -83077949 + L2 LINE L2 3265 3312 -1 22 56 0 0 chr5 120008351 120008387 -83077145 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 120008550 120008584 -83076948 + AT_rich Low_complexity Low_complexity 1 34 0 225 277 48 0 chr5 120008614 120008697 -83076835 - MIR SINE MIR 0 262 176 21 0 0 0 chr5 120008716 120008737 -83076795 + AT_rich Low_complexity Low_complexity 1 21 0 787 280 144 49 chr5 120009387 120009922 -83075610 + MLT1K LTR MaLR 3 588 0 719 251 45 10 chr5 120010335 120010534 -83074998 + MIR SINE MIR 53 258 -4 795 57 0 0 chr5 120010868 120010973 -83074559 + (GAAA)n Simple_repeat Simple_repeat 1 105 0 210 37 0 0 chr5 120010972 120010999 -83074533 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 * 186 344 62 55 chr5 120011925 120012053 -83073479 + L2 LINE L2 2846 2974 -339 1342 254 22 11 chr5 120013036 120013398 -83072134 + L1M2b LINE L1 277 642 -6567 7683 147 36 24 chr5 120013413 120015815 -83069717 + L1MA4 LINE L1 3859 6295 -5 2098 118 0 0 chr5 120015928 120016207 -83069325 + AluSg SINE Alu 1 279 -31 19804 60 7 0 chr5 120016207 120018924 -83066608 + L1P LINE L1 985 3719 -2427 444 141 0 0 chr5 120019024 120019102 -83066430 - L1M4 LINE L1 -1741 4405 4328 14565 45 3 0 chr5 120019163 120021730 -83063802 + L1PA5 LINE L1 3576 6147 -7 21 0 0 0 chr5 120021730 120021751 -83063781 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 120023066 120023104 -83062428 + AT_rich Low_complexity Low_complexity 1 38 0 227 271 29 0 chr5 120023274 120023344 -83062188 - L1MC/D LINE L1 -1884 5924 5853 5911 172 42 10 chr5 120023438 120024459 -83061073 - L1PA16 LINE L1 -3 6163 5176 2232 164 39 5 chr5 120024459 120024873 -83060659 + MSTA LTR MaLR 1 428 0 9371 158 24 11 chr5 120024873 120026499 -83059033 + MSTA-int LTR MaLR 1 1647 -4 2317 156 62 0 chr5 120026503 120026906 -83058626 + MSTA LTR MaLR 1 428 0 5911 172 42 10 chr5 120026906 120027961 -83057571 - L1PA16 LINE L1 -992 5174 4015 477 343 39 11 chr5 120028113 120028291 -83057241 + MIR SINE MIR 59 241 -21 258 219 135 10 chr5 120028419 120028515 -83057017 + L2 LINE L2 3052 3159 -154 251 325 82 74 chr5 120030040 120030701 -83054831 + L2 LINE L2 817 1482 -1832 182 339 41 82 chr5 120030717 120031036 -83054496 + L2 LINE L2 1793 2098 -1216 443 352 175 13 chr5 120031077 120031756 -83053776 + L2 LINE L2 2044 2832 -482 674 125 71 0 chr5 120031873 120031985 -83053547 + Charlie1 DNA MER1_type 99 218 -2543 400 248 36 0 chr5 120031978 120032115 -83053417 + Charlie1 DNA MER1_type 2620 2761 0 * 7546 183 21 77 chr5 120032999 120036032 -83049500 + L1PB4 LINE L1 3287 6144 -12 3263 113 62 25 chr5 120036033 120036581 -83048951 - Tigger1 DNA MER2_type -189 2229 1662 2096 110 17 3 chr5 120086604 120086896 -82998636 - AluSg SINE Alu -14 296 1 721 296 73 14 chr5 120087294 120087514 -82998018 + MIR SINE MIR 3 235 -27 280 308 39 10 chr5 120087607 120087711 -82997821 + L2 LINE L2 3192 3298 -15 898 298 77 39 chr5 120089033 120089527 -82996005 - L1ME3A LINE L1 -230 5940 5428 270 79 0 0 chr5 120089531 120089569 -82995963 + L1M4 LINE L1 5815 5852 -332 810 118 21 76 chr5 120089582 120089726 -82995806 - AluJo SINE Alu -176 136 1 432 310 128 75 chr5 120091207 120091302 -82994230 - MLT1K LTR MaLR -10 578 490 867 153 8 8 chr5 120091302 120091433 -82994099 + FLAM_A SINE Alu 1 131 -2 432 310 128 75 chr5 120091433 120091711 -82993821 - MLT1K LTR MaLR -98 490 185 2077 157 0 0 chr5 120092051 120092363 -82993169 + AluJb SINE Alu 1 312 0 322 320 85 7 chr5 120093182 120093335 -82992197 + MIR SINE MIR 39 203 -59 250 217 33 17 chr5 120093607 120093667 -82991865 + GA-rich Low_complexity Low_complexity 3 63 0 1084 210 0 0 chr5 120093883 120094069 -82991463 + MER5A DNA MER1_type 4 189 0 1719 167 17 3 chr5 120096210 120096504 -82989028 + AluJo SINE Alu 1 298 -14 293 155 17 17 chr5 120096933 120096991 -82988541 + L2 LINE L2 3189 3246 -67 383 338 50 0 chr5 120097058 120097197 -82988335 - MIR SINE MIR -36 226 81 415 304 169 0 chr5 120097421 120097569 -82987963 - MER5A DNA MER1_type -8 181 9 2114 168 15 0 chr5 120097767 120098106 -82987426 + MER2 DNA MER2_type 1 344 0 410 167 107 0 chr5 120098184 120098268 -82987264 - MIR3 SINE MIR -23 185 93 1634 256 63 54 chr5 120098551 120098772 -82986760 - HsTC2a DNA Tc2 -1165 735 517 2240 214 139 15 chr5 120098772 120099291 -82986241 + MER119 DNA MER1_type 1 583 0 1634 256 63 54 chr5 120099291 120099769 -82985763 - HsTC2a DNA Tc2 -1383 517 30 6258 143 10 5 chr5 120099900 120100740 -82984792 - L1PB1 LINE L1 0 6151 5300 2198 111 3 0 chr5 120100740 120101046 -82984486 - AluSx SINE Alu -5 307 1 6258 143 10 5 chr5 120101046 120101792 -82983740 - L1PB1 LINE L1 -851 5300 4559 375 276 125 56 chr5 120102229 120102461 -82983071 + MIR SINE MIR 4 251 -11 602 319 140 16 chr5 120102600 120102979 -82982553 + L2 LINE L2 2534 2959 -355 413 248 60 26 chr5 120103061 120103178 -82982354 + L2 LINE L2 3193 3313 0 21 0 0 0 chr5 120103972 120103993 -82981539 + AT_rich Low_complexity Low_complexity 1 21 0 222 253 172 30 chr5 120104277 120104376 -82981156 - MIR SINE MIR -53 209 97 406 332 105 34 chr5 120104764 120105144 -82980388 - L2 LINE L2 -337 2977 2571 380 295 133 12 chr5 120105843 120106016 -82979516 - MIR SINE MIR -33 229 36 1751 333 31 15 chr5 120106903 120107851 -82977681 + HERV16 LTR ERVL 390 1372 -3624 2264 157 12 25 chr5 120108169 120108570 -82976962 - MLT1A1-int LTR MaLR -1338 397 2 1338 179 21 6 chr5 120108575 120108859 -82976673 - MLT1A1 LTR MaLR -3 362 1 1024 264 39 4 chr5 120108865 120109119 -82976413 + LTR16B LTR ERVL 201 463 -1 399 294 0 0 chr5 120109119 120109204 -82976328 + L2 LINE L2 3146 3230 -42 2388 67 37 0 chr5 120109560 120109857 -82975675 - AluSg1 SINE Alu -1 308 1 305 234 0 13 chr5 120110307 120110384 -82975148 - MIR SINE MIR -108 154 79 21 0 0 0 chr5 120111827 120111848 -82973684 + AT_rich Low_complexity Low_complexity 1 21 0 519 141 0 0 chr5 120112732 120112824 -82972708 + (TCC)n Simple_repeat Simple_repeat 3 94 0 855 254 60 68 chr5 120112838 120113236 -82972296 + MLT1G LTR MaLR 1 395 -195 345 156 0 0 chr5 120113385 120113462 -82972070 + CT-rich Low_complexity Low_complexity 2 78 0 2184 96 0 69 chr5 120115889 120116221 -82969311 + AluSq SINE Alu 1 309 -4 1633 188 9 35 chr5 120116856 120117175 -82968357 + AluJo SINE Alu 1 311 -1 1694 188 172 68 chr5 120117281 120117615 -82967917 + MLT1E2 LTR MaLR 1 405 -221 2385 97 0 0 chr5 120117615 120117923 -82967609 + AluY SINE Alu 1 308 -3 1694 188 172 68 chr5 120117923 120118087 -82967445 + MLT1E2 LTR MaLR 405 551 -75 24 32 0 0 chr5 120118166 120118197 -82967335 + AT_rich Low_complexity Low_complexity 1 31 0 8807 115 21 35 chr5 120118574 120120462 -82965070 - L1P3 LINE L1 -4387 1759 12 351 0 0 0 chr5 120121141 120121180 -82964352 + (TG)n Simple_repeat Simple_repeat 1 39 0 1262 190 71 4 chr5 120121180 120121433 -82964099 - AluJo SINE Alu -31 281 12 568 212 9 35 chr5 120122312 120122425 -82963107 - MER81 DNA DNA 0 114 5 347 285 126 43 chr5 120123008 120123070 -82962462 - L1ME4a LINE L1 -23 6098 6043 1959 100 90 4 chr5 120123070 120123349 -82962183 + AluSx SINE Alu 1 303 -9 347 285 126 43 chr5 120123349 120123428 -82962104 - L1ME4a LINE L1 -78 6043 5972 406 73 15 15 chr5 120123428 120123496 -82962036 + (TA)n Simple_repeat Simple_repeat 2 69 0 347 285 126 43 chr5 120123496 120123557 -82961975 - L1ME4a LINE L1 -149 5972 5917 1783 185 54 51 chr5 120123557 120123930 -82961602 + MLT1A2 LTR MaLR 1 374 0 347 285 126 43 chr5 120123930 120124027 -82961505 - L1ME4a LINE L1 -204 5917 5772 357 310 70 23 chr5 120124397 120124568 -82960964 + MLT1L LTR MaLR 437 615 0 689 266 46 83 chr5 120124591 120124706 -82960826 - L1ME4a LINE L1 -425 5696 5578 809 159 0 0 chr5 120124706 120124832 -82960700 - FLAM_C SINE Alu -7 126 1 689 266 46 83 chr5 120124832 120125111 -82960421 - L1ME4a LINE L1 -543 5578 5317 2213 208 69 10 chr5 120126737 120126777 -82958755 - MLT2B1 LTR ERVL 0 520 484 549 0 0 0 chr5 120126777 120126838 -82958694 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2213 208 69 10 chr5 120126838 120127288 -82958244 - MLT2B1 LTR ERVL -36 484 1 2054 108 120 0 chr5 120127396 120127721 -82957811 - THE1B LTR MaLR 0 364 1 2671 274 116 30 chr5 120127944 120129185 -82956347 + L1MEc LINE L1 43 1404 -4992 1881 196 142 2 chr5 120129185 120129628 -82955904 + MLT1D LTR MaLR 1 505 0 2671 274 116 30 chr5 120129628 120129698 -82955834 + L1MEc LINE L1 1404 1467 -4929 1148 158 15 20 chr5 120129701 120129897 -82955635 + AluJb SINE Alu 90 284 -28 612 207 51 173 chr5 120130446 120130653 -82954879 + MLT1G LTR MaLR 26 197 -354 396 0 0 0 chr5 120130653 120130697 -82954835 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 612 207 51 173 chr5 120130697 120130784 -82954748 + MLT1G LTR MaLR 197 293 -258 932 231 36 39 chr5 120130819 120131156 -82954376 + L1MEc LINE L1 1729 2064 -4332 615 160 20 0 chr5 120131157 120131257 -82954275 + MER58A DNA MER1_type 2 103 -4 386 68 51 0 chr5 120131262 120131321 -82954211 + MER58A DNA MER1_type 163 224 0 270 209 39 62 chr5 120131321 120131450 -82954082 + L1MEc LINE L1 2057 2182 -4214 346 323 81 104 chr5 120131604 120132075 -82953457 + L2 LINE L2 2813 3272 0 608 242 153 28 chr5 120132133 120132348 -82953184 - MIR SINE MIR 0 262 21 442 248 38 0 chr5 120132340 120132445 -82953087 - MIR3 SINE MIR -6 202 94 * 1695 151 49 26 chr5 120134201 120134326 -82951206 + AluSx SINE Alu 1 122 -190 2149 97 7 17 chr5 120134326 120134626 -82950906 + AluSg SINE Alu 3 299 -11 1695 151 49 26 chr5 120134626 120134805 -82950727 + AluSx SINE Alu 122 312 0 4236 93 15 2 chr5 120135799 120136390 -82949142 - L1PA8A LINE L1 -6 6125 5527 2213 67 3 11 chr5 120136440 120136752 -82948780 + AluY SINE Alu 1 310 0 654 283 83 4 chr5 120136753 120136993 -82948539 + LTR16C LTR ERVL 233 491 0 786 273 48 40 chr5 120137055 120137304 -82948228 + MIR SINE MIR 8 258 -4 2052 162 19 30 chr5 120137668 120138039 -82947493 + MLT2D LTR ERVL 1 367 -47 243 0 0 0 chr5 120138055 120138082 -82947450 + (TA)n Simple_repeat Simple_repeat 2 28 0 371 130 0 14 chr5 120138082 120138151 -82947381 + (CA)n Simple_repeat Simple_repeat 1 68 0 44 46 0 0 chr5 120138412 120138477 -82947055 + AT_rich Low_complexity Low_complexity 1 65 0 27 0 0 0 chr5 120138618 120138645 -82946887 + AT_rich Low_complexity Low_complexity 1 27 0 1526 181 85 7 chr5 120138656 120138938 -82946594 + AluJb SINE Alu 2 305 -7 2042 138 10 3 chr5 120139120 120139424 -82946108 - AluSx SINE Alu -6 306 1 1719 114 129 0 chr5 120140079 120140342 -82945190 - AluSg SINE Alu -3 297 1 28 29 0 0 chr5 120140561 120140596 -82944936 + AT_rich Low_complexity Low_complexity 1 35 0 219 69 0 0 chr5 120140800 120140829 -82944703 + (GCTG)n Simple_repeat Simple_repeat 2 30 0 541 280 117 21 chr5 120141084 120141323 -82944209 + MIR SINE MIR 1 262 0 22 0 0 0 chr5 120141652 120141674 -82943858 + AT_rich Low_complexity Low_complexity 1 22 0 418 194 24 17 chr5 120142455 120142570 -82942962 + LTR33A LTR ERVL 435 522 -1 442 314 89 44 chr5 120142571 120142842 -82942690 + L1MC4a LINE L1 5796 6078 -1730 432 204 0 74 chr5 120143165 120143273 -82942259 - HsTC2 DNA Tc2 -1 1897 1798 1894 242 178 5 chr5 120143279 120143898 -82941634 - HsTC2 DNA Tc2 -1172 726 1 349 308 157 6 chr5 120143898 120144070 -82941462 - MIR SINE MIR -64 198 1 562 260 130 26 chr5 120144106 120144299 -82941233 - L1ME4a LINE L1 -31 6090 5860 1162 225 143 50 chr5 120144299 120144761 -82940771 - MLT1D LTR MaLR 0 505 1 562 260 130 26 chr5 120144761 120144836 -82940696 - L1ME4a LINE L1 -261 5860 5794 239 340 57 38 chr5 120145128 120145287 -82940245 + MIR SINE MIR 34 195 -67 379 266 23 55 chr5 120146106 120146234 -82939298 + L2 LINE L2 3145 3268 -4 196 186 34 34 chr5 120146237 120146296 -82939236 - L3 LINE CR1 -146 1431 1373 253 91 0 0 chr5 120147809 120147853 -82937679 + L1MA3 LINE L1 6262 6305 0 531 306 94 25 chr5 120148883 120149128 -82936404 + MIR SINE MIR 1 262 0 487 296 33 88 chr5 120149368 120149642 -82935890 - LTR33 LTR ERVL -260 261 3 1419 212 63 15 chr5 120149675 120150029 -82935503 - MLT1A1 LTR MaLR 0 365 1 751 268 91 56 chr5 120150064 120150741 -82934791 + L1ME4a LINE L1 4500 5151 -1019 1852 169 13 3 chr5 120150741 120151043 -82934489 + AluJo SINE Alu 1 305 -7 751 268 91 56 chr5 120151043 120151720 -82933812 + L1ME4a LINE L1 5151 5947 -223 219 223 29 29 chr5 120152200 120152303 -82933229 + (TA)n Simple_repeat Simple_repeat 2 104 0 376 265 17 103 chr5 120152386 120152580 -82932952 - MIR SINE MIR -60 202 21 2199 110 0 0 chr5 120153521 120153811 -82931721 + AluSg SINE Alu 1 290 -20 964 161 17 98 chr5 120153862 120154098 -82931434 + MER20 DNA MER1_type 2 218 -1 533 320 75 48 chr5 120155662 120156099 -82929433 + L2 LINE L2 2817 3265 -7 1923 157 0 19 chr5 120156561 120156879 -82928653 + AluJb SINE Alu 1 312 0 1293 258 150 6 chr5 120157314 120157861 -82927671 + L1ME3A LINE L1 5335 5960 -202 979 179 6 0 chr5 120157901 120158069 -82927463 + FRAM SINE Alu 2 170 -6 252 260 43 77 chr5 120158110 120158318 -82927214 + L1ME3A LINE L1 5962 6162 -8 1129 207 5 22 chr5 120158885 120159045 -82926487 + MER20 DNA MER1_type 1 157 -62 2588 143 42 23 chr5 120159045 120159521 -82926011 - MER31A LTR ERV1 0 485 1 1129 207 5 22 chr5 120159521 120159582 -82925950 + MER20 DNA MER1_type 157 218 -1 316 246 22 37 chr5 120159729 120159863 -82925669 + L1ME4a LINE L1 5987 6118 -3 224 333 147 0 chr5 120161481 120161583 -82923949 + L2 LINE L2 2942 3058 -214 702 319 29 0 chr5 120164177 120164387 -82921145 - MIR SINE MIR 0 262 47 540 315 15 11 chr5 120164525 120164785 -82920747 + MIR SINE MIR 2 262 0 720 284 75 29 chr5 120165386 120165625 -82919907 - MIR SINE MIR 0 262 13 2108 124 0 0 chr5 120165848 120166147 -82919385 - AluSg1 SINE Alu -10 299 1 2206 107 6 28 chr5 120166187 120166505 -82919027 + AluSx SINE Alu 1 311 -1 447 185 0 0 chr5 120166717 120166809 -82918723 + CT-rich Low_complexity Low_complexity 2 93 0 1644 168 21 7 chr5 120166809 120167095 -82918437 - AluJb SINE Alu -16 296 7 250 296 0 0 chr5 120167471 120167542 -82917990 + MLT1K LTR MaLR 517 587 -1 282 103 0 0 chr5 120167634 120167673 -82917859 + MLT1E1 LTR MaLR 1 39 -585 787 133 0 16 chr5 120167676 120167804 -82917728 + FLAM_A SINE Alu 10 135 -7 503 264 39 16 chr5 120167818 120167947 -82917585 + MLT1E1 LTR MaLR 18 149 -505 1010 234 29 40 chr5 120167952 120168230 -82917302 + MLT1E1 LTR MaLR 365 639 -15 668 210 58 0 chr5 120168344 120168482 -82917050 + MLT1B LTR MaLR 2 147 -243 21 0 0 0 chr5 120168692 120168713 -82916819 + AT_rich Low_complexity Low_complexity 1 21 0 1805 147 57 85 chr5 120168751 120169152 -82916380 - MLT1B LTR MaLR 0 390 1 29 0 0 0 chr5 120169436 120169465 -82916067 + AT_rich Low_complexity Low_complexity 1 29 0 688 337 103 24 chr5 120169730 120170340 -82915192 + L2 LINE L2 2532 3192 -121 24 53 0 0 chr5 120170787 120170825 -82914707 + AT_rich Low_complexity Low_complexity 1 38 0 1669 140 31 65 chr5 120170874 120171260 -82914272 - THE1C LTR MaLR -2 373 1 1811 100 63 47 chr5 120171301 120171600 -82913932 - AluSx SINE Alu -8 304 1 2305 113 0 3 chr5 120171671 120171982 -82913550 + AluSg SINE Alu 1 310 0 24 77 0 0 chr5 120172041 120172093 -82913439 + AT_rich Low_complexity Low_complexity 1 52 0 2007 209 59 11 chr5 120172423 120172949 -82912583 - L1M4 LINE L1 -908 5238 4688 * 3294 200 54 37 chr5 120172945 120173010 -82912522 + L1ME1 LINE L1 5296 5358 -808 1081 192 16 64 chr5 120173010 120173090 -82912442 - MER8 DNA MER2_type -1 238 156 2112 132 0 3 chr5 120173090 120173400 -82912132 + AluSx SINE Alu 1 309 -3 1081 192 16 64 chr5 120173400 120173569 -82911963 - MER8 DNA MER2_type -83 156 1 3294 200 54 37 chr5 120173569 120174343 -82911189 + L1ME1 LINE L1 5358 6149 -17 2012 123 3 23 chr5 120174698 120174998 -82910534 - AluSc SINE Alu -15 294 1 349 245 51 0 chr5 120175018 120175116 -82910416 - MIR SINE MIR -77 185 83 327 313 65 57 chr5 120175155 120175385 -82910147 + L2 LINE L2 3077 3308 -5 1977 142 19 13 chr5 120175435 120175745 -82909787 - AluSx SINE Alu 0 312 1 187 320 0 0 chr5 120175853 120175903 -82909629 - MER5A DNA MER1_type 0 189 140 2464 260 76 47 chr5 120176038 120176651 -82908881 - HAL1 LINE L1 -151 2356 1762 5054 63 20 1 chr5 120176651 120177297 -82908235 - PABL_A LTR ERV1 -2 658 1 2464 260 76 47 chr5 120177297 120177991 -82907541 - HAL1 LINE L1 -745 1762 1011 350 291 84 84 chr5 120178100 120178468 -82907064 - HAL1 LINE L1 -1816 691 324 1158 135 0 0 chr5 120178513 120178669 -82906863 + AluSx SINE Alu 34 189 -123 214 246 46 15 chr5 120178806 120178871 -82906661 + MER5B DNA MER1_type 87 153 -25 1988 139 34 0 chr5 120178999 120179293 -82906239 + AluSx SINE Alu 1 304 -8 238 206 132 15 chr5 120180368 120180436 -82905096 + L2 LINE L2 3193 3268 -4 2841 164 58 41 chr5 120180948 120181635 -82903897 - MER67C LTR ERV1 0 710 12 197 319 117 0 chr5 120182142 120182236 -82903296 - L2 LINE L2 -23 3290 3186 305 279 109 85 chr5 120183167 120183461 -82902071 + L1M2 LINE L1 654 954 -5895 2400 83 3 0 chr5 120184981 120185293 -82900239 + AluSp SINE Alu 1 313 0 214 209 23 0 chr5 120185308 120185351 -82900181 + (CATATA)n Simple_repeat Simple_repeat 1 44 0 205 196 0 71 chr5 120186273 120186329 -82899203 + CT-rich Low_complexity Low_complexity 4 55 0 410 330 80 27 chr5 120187000 120187188 -82898344 + MIR SINE MIR 8 205 -57 223 162 0 44 chr5 120187326 120187394 -82898138 + (TTAAA)n Simple_repeat Simple_repeat 3 67 0 22 56 0 0 chr5 120187683 120187719 -82897813 + AT_rich Low_complexity Low_complexity 1 36 0 1794 172 20 7 chr5 120188198 120188500 -82897032 + AluJo SINE Alu 1 306 -6 2304 106 0 0 chr5 120189552 120189855 -82895677 - AluSp SINE Alu -10 303 1 2323 86 0 16 chr5 120189939 120190243 -82895289 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5 120190571 120190593 -82894939 + AT_rich Low_complexity Low_complexity 1 22 0 183 344 49 0 chr5 120191101 120191162 -82894370 - MIR SINE MIR -152 110 47 230 395 25 0 chr5 120192362 120192481 -82893051 + MIR SINE MIR 36 157 -105 462 312 58 48 chr5 120192627 120192922 -82892610 - MLT1K LTR MaLR -274 314 17 1266 164 303 6 chr5 120193256 120193579 -82891953 - MSTD-int LTR MaLR -1316 419 1 1259 206 78 81 chr5 120193579 120193976 -82891556 - MSTD LTR MaLR 0 396 1 8218 137 21 13 chr5 120194107 120194993 -82890539 - Tigger1 DNA MER2_type -1000 1418 514 2195 85 4 0 chr5 120194993 120195297 -82890235 - AluSg SINE Alu 0 305 1 8218 137 21 13 chr5 120195297 120195816 -82889716 - Tigger1 DNA MER2_type -1904 514 1 1667 142 0 16 chr5 120195991 120196237 -82889295 - AluSx SINE Alu -23 289 48 815 279 141 17 chr5 120196304 120196666 -82888866 + L2 LINE L2 2393 2799 -515 807 274 148 58 chr5 120196787 120197221 -82888311 + L2 LINE L2 2841 3313 0 580 291 61 35 chr5 120197271 120197584 -82887948 - LTR40a LTR ERVL -7 512 192 332 215 207 41 chr5 120197730 120197851 -82887681 - LTR40a LTR ERVL -378 141 1 729 328 25 31 chr5 120197981 120198301 -82887231 - MLT1K LTR MaLR -260 328 11 26 0 0 0 chr5 120198433 120198459 -82887073 + AT_rich Low_complexity Low_complexity 1 26 0 2300 111 3 0 chr5 120198459 120198766 -82886766 - AluSp SINE Alu -5 308 1 811 181 50 12 chr5 120198910 120199070 -82886462 + MER96 DNA MER1_type? 2 167 -8 894 176 14 0 chr5 120199484 120199632 -82885900 - AluJb SINE Alu -5 307 158 1958 164 0 7 chr5 120200002 120200301 -82885231 - AluJo SINE Alu -15 297 1 29 0 0 0 chr5 120200304 120200333 -82885199 + AT_rich Low_complexity Low_complexity 1 29 0 245 368 98 8 chr5 120200429 120200562 -82884970 - L2 LINE L2 -1 3271 3127 2040 136 3 16 chr5 120201088 120201404 -82884128 + AluSx SINE Alu 1 312 0 1696 189 18 0 chr5 120201569 120201849 -82883683 - AluJb SINE Alu -25 287 3 208 344 18 78 chr5 120202112 120202330 -82883202 - L3 LINE CR1 -354 1223 1019 564 298 178 63 chr5 120202723 120202898 -82882634 - L2 LINE L2 0 3313 3160 2184 114 0 7 chr5 120202898 120203196 -82882336 - AluSx SINE Alu -16 296 1 564 298 178 63 chr5 120203196 120203818 -82881714 - L2 LINE L2 -153 3160 2431 2246 112 3 16 chr5 120203981 120204002 -82881530 - AluSp SINE Alu -5 308 288 225 0 0 0 chr5 120204002 120204027 -82881505 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2246 112 3 16 chr5 120204027 120204317 -82881215 - AluSp SINE Alu -25 288 1 630 172 0 182 chr5 120204546 120204744 -82880788 - FRAM SINE Alu -4 162 1 2265 93 3 0 chr5 120205013 120205303 -82880229 - AluSg SINE Alu -19 291 1 305 325 117 8 chr5 120205472 120205592 -82879940 - MIR3 SINE MIR 0 208 76 387 294 97 30 chr5 120205720 120205964 -82879568 - L1MC4 LINE L1 -44 7998 7772 1384 202 52 57 chr5 120205964 120206331 -82879201 - MLT1A1 LTR MaLR 0 365 1 387 294 97 30 chr5 120206331 120206375 -82879157 - L1MC4 LINE L1 -270 7772 7732 309 109 0 0 chr5 120206375 120206421 -82879111 + (TA)n Simple_repeat Simple_repeat 2 47 0 387 294 97 30 chr5 120206421 120206533 -82878999 - L1MC4 LINE L1 -310 7732 7570 5389 93 1 7 chr5 120207243 120207998 -82877534 - L1PA11 LINE L1 -2 6172 5422 * 6097 75 13 0 chr5 120207994 120209345 -82876187 - L1PA8A LINE L1 -1 6130 4769 201 382 122 23 chr5 120209374 120209505 -82876027 + L2 LINE L2 3119 3262 -10 21 0 0 0 chr5 120209590 120209611 -82875921 + AT_rich Low_complexity Low_complexity 1 21 0 561 172 0 0 chr5 120211099 120211192 -82874340 + AluJ/FLAM SINE Alu 2 94 -218 327 211 31 109 chr5 120211202 120211330 -82874202 - L1M4 LINE L1 -841 5305 5188 5587 195 39 23 chr5 120211331 120211700 -82873832 - L1MC1 LINE L1 0 6613 6251 2371 107 19 25 chr5 120211700 120212066 -82873466 - THE1B LTR MaLR 0 364 1 5587 195 39 23 chr5 120212066 120213941 -82871591 - L1MC1 LINE L1 -362 6251 4346 8269 146 63 75 chr5 120213950 120215257 -82870275 - L1MC1 LINE L1 -4298 2128 854 2284 106 0 3 chr5 120215257 120215559 -82869973 - AluSx SINE Alu -11 301 1 8269 146 63 75 chr5 120215559 120216353 -82869179 - L1MC1 LINE L1 -5572 854 52 526 214 0 0 chr5 120216355 120216453 -82869079 - FLAM_A SINE Alu -11 131 34 563 222 22 11 chr5 120216515 120216700 -82868832 - L1M4 LINE L1 -975 5171 4985 810 159 0 14 chr5 120216701 120216839 -82868693 - FLAM_C SINE Alu -1 142 7 836 231 22 6 chr5 120216845 120217094 -82868438 - L1M4 LINE L1 -1154 5252 4999 3491 217 44 50 chr5 120217097 120218151 -82867381 - L1MDb LINE L1 -4953 1422 413 3230 122 16 8 chr5 120218567 120219074 -82866458 - MER9 LTR ERVK 0 511 1 1591 233 27 5 chr5 120219677 120220081 -82865451 - L1MDb LINE L1 -5987 422 10 2195 123 0 0 chr5 120220559 120220867 -82864665 - AluY SINE Alu -3 308 1 7001 193 125 31 chr5 120220990 120222594 -82862938 + MER52A LTR ERV1 1 1755 0 197 325 172 38 chr5 120222645 120222854 -82862678 + L2 LINE L2 2047 2283 -1031 589 171 0 18 chr5 120223132 120223243 -82862289 - L1ME3A LINE L1 -7 6163 6055 2075 137 26 7 chr5 120223664 120223970 -82861562 - AluSx SINE Alu 0 312 1 984 184 12 0 chr5 120224112 120224275 -82861257 + FAM SINE Alu 1 165 -10 374 108 15 0 chr5 120224294 120224359 -82861173 + (CA)n Simple_repeat Simple_repeat 1 66 0 3946 190 46 42 chr5 120224707 120225610 -82859922 - L1MB8 LINE L1 0 6178 5280 242 157 0 20 chr5 120225610 120225661 -82859871 + (TA)n Simple_repeat Simple_repeat 2 51 0 3946 190 46 42 chr5 120225661 120226414 -82859118 - L1MB8 LINE L1 -898 5280 4481 2119 103 14 3 chr5 120226414 120226704 -82858828 - AluSp SINE Alu -20 293 1 3946 190 46 42 chr5 120226704 120226879 -82858653 - L1MB8 LINE L1 -1697 4481 4308 4497 114 48 41 chr5 120226944 120227768 -82857764 - L1MA2 LINE L1 0 7723 6894 16843 142 65 75 chr5 120227768 120228274 -82857258 - L1MA2 LINE L1 -4072 3493 2983 2303 105 0 3 chr5 120228274 120228580 -82856952 - AluSq SINE Alu -2 311 7 16843 142 65 75 chr5 120228580 120229102 -82856430 - L1MA2 LINE L1 -4582 2983 2457 1573 182 27 27 chr5 120229102 120229398 -82856134 + AluJo SINE Alu 1 296 -16 16843 142 65 75 chr5 120229398 120229496 -82856036 - L1MA2 LINE L1 -5108 2457 2359 406 129 0 0 chr5 120229496 120229558 -82855974 + Alu SINE Alu 236 297 -15 16843 142 65 75 chr5 120229558 120231872 -82853660 - L1MA2 LINE L1 -5206 2359 27 697 257 40 18 chr5 120231858 120232084 -82853448 - L1MB8 LINE L1 -1867 4279 4049 * 21 0 0 0 chr5 120232607 120232628 -82852904 + AT_rich Low_complexity Low_complexity 1 21 0 1754 145 87 0 chr5 120232633 120232909 -82852623 + AluJb SINE Alu 1 300 -12 410 171 23 0 chr5 120233647 120233735 -82851797 - MER53 DNA DNA -83 106 17 * 432 148 12 0 chr5 120233658 120233739 -82851793 + MER53 DNA DNA 105 186 -3 1751 159 0 0 chr5 120233899 120234169 -82851363 - AluSx SINE Alu -1 311 42 365 244 38 119 chr5 120234201 120234361 -82851171 - HAL1 LINE L1 -2266 241 95 1621 205 17 7 chr5 120234418 120234720 -82850812 - AluJb SINE Alu -7 305 1 1867 226 31 43 chr5 120234793 120234832 -82850700 - L1M4 LINE L1 -1031 5184 5146 2455 58 0 3 chr5 120234832 120235125 -82850407 + AluY SINE Alu 1 292 -19 1867 226 31 43 chr5 120235125 120235496 -82850036 - L1M4 LINE L1 -1069 5146 4781 3732 186 45 13 chr5 120235496 120236206 -82849326 - MER44D DNA MER2_type 0 605 1 1867 226 31 43 chr5 120236206 120236405 -82849127 - L1M4 LINE L1 -1434 4781 4581 12339 209 34 20 chr5 120236428 120239121 -82846411 - L1PA16 LINE L1 -10 6859 4204 2165 112 69 20 chr5 120239121 120239468 -82846064 + THE1B LTR MaLR 1 364 0 11751 87 11 0 chr5 120239468 120241030 -82844502 + THE1B-int LTR MaLR 1 1580 0 2265 130 8 24 chr5 120241030 120241400 -82844132 + THE1B LTR MaLR 1 364 0 12339 209 34 20 chr5 120241400 120243625 -82841907 - L1PA16 LINE L1 -2665 4204 2147 1906 174 0 0 chr5 120243625 120243929 -82841603 - AluJb SINE Alu -8 304 1 12339 209 34 20 chr5 120243929 120245380 -82840152 - L1PA16 LINE L1 -4722 2147 717 2974 256 65 46 chr5 120245381 120245659 -82839873 - L1MEc LINE L1 -3272 2943 2672 2230 175 101 17 chr5 120245659 120246134 -82839398 - MLT2B2 LTR ERVL 0 515 1 2974 256 65 46 chr5 120246134 120247757 -82837775 - L1MEc LINE L1 -3543 2672 1049 3399 137 26 7 chr5 120248322 120248861 -82836671 - MER41C LTR ERV1 -2 552 4 615 230 0 0 chr5 120249035 120249161 -82836371 - L1MC4 LINE L1 -1120 6922 6797 972 244 44 86 chr5 120249172 120249602 -82835930 - L1MC4 LINE L1 -2038 5770 5359 334 231 0 0 chr5 120250043 120250112 -82835420 + FLAM_A SINE Alu 53 114 -19 393 247 23 121 chr5 120250855 120250982 -82834550 + MER5B DNA MER1_type 21 128 -50 2001 145 3 6 chr5 120250982 120251293 -82834239 + AluJb SINE Alu 3 312 0 393 247 23 121 chr5 120251293 120251339 -82834193 + MER5B DNA MER1_type 128 177 -1 1778 165 3 38 chr5 120252308 120252624 -82832908 + AluJb SINE Alu 1 305 -7 30 0 0 0 chr5 120252660 120252690 -82832842 + AT_rich Low_complexity Low_complexity 1 30 0 1615 174 0 39 chr5 120253180 120253490 -82832042 - AluJo SINE Alu -14 298 1 322 328 99 0 chr5 120253597 120253728 -82831804 + MIR SINE MIR 49 192 -70 319 152 0 0 chr5 120253767 120253813 -82831719 + L1PA15-16 LINE L1 202 247 -6602 187 340 96 0 chr5 120254447 120254541 -82830991 - MIR3 SINE MIR -10 198 96 21 71 0 0 chr5 120254859 120254901 -82830631 + AT_rich Low_complexity Low_complexity 1 42 0 2005 123 43 0 chr5 120255006 120255282 -82830250 + AluSg SINE Alu 1 288 -22 352 246 60 8 chr5 120255718 120255852 -82829680 - L1MEc LINE L1 -4886 1656 1516 28 29 0 0 chr5 120255859 120255894 -82829638 + AT_rich Low_complexity Low_complexity 1 35 0 2893 139 36 47 chr5 120255894 120256475 -82829057 - L1MA9 LINE L1 -31 6281 5707 2064 184 52 0 chr5 120256476 120256861 -82828671 - MSTB2 LTR MaLR 0 457 53 810 105 0 0 chr5 120256861 120257074 -82828458 - AluSg/x SINE Alu 0 389 177 1770 126 20 4 chr5 120257074 120257329 -82828203 - AluSq SINE Alu -54 259 1 398 145 0 0 chr5 120257329 120257391 -82828141 - MSTB2 LTR MaLR -395 62 1 7063 157 24 131 chr5 120257397 120258956 -82826576 - L1MA9 LINE L1 -608 5704 3980 8870 40 3 4 chr5 120258956 120260028 -82825504 - MER11C LTR ERVK 0 1071 1 7063 157 24 131 chr5 120260028 120260618 -82824914 - L1MA9 LINE L1 -2332 3980 3726 773 178 0 0 chr5 120260618 120260747 -82824785 - FLAM_C SINE Alu -12 131 3 7063 157 24 131 chr5 120260747 120261034 -82824498 - L1MA9 LINE L1 -2586 3726 3410 358 222 0 0 chr5 120261049 120261121 -82824411 - L1MEc LINE L1 -6067 758 687 1503 153 0 133 chr5 120262019 120262366 -82823166 - AluJo SINE Alu -1 301 1 728 142 22 52 chr5 120263015 120263149 -82822383 + FLAM_C SINE Alu 2 131 -2 1873 168 3 7 chr5 120263481 120263772 -82821760 + AluJb SINE Alu 1 290 -22 255 241 0 35 chr5 120263824 120263882 -82821650 + polypyrimidine Low_complexity Low_complexity 4 59 0 667 339 138 29 chr5 120263906 120264297 -82821235 - L2 LINE L2 -80 3233 2886 1876 173 0 0 chr5 120264297 120264592 -82820940 + AluSx SINE Alu 1 295 -17 667 339 138 29 chr5 120264592 120264882 -82820650 - L2 LINE L2 -427 2886 2487 400 316 135 8 chr5 120264970 120265207 -82820325 - L2 LINE L2 -2945 369 103 26 64 0 0 chr5 120266700 120266747 -82818785 + AT_rich Low_complexity Low_complexity 1 47 0 755 219 51 65 chr5 120267137 120267429 -82818103 - HsTC2 DNA Tc2 -3 1895 1608 1179 230 109 51 chr5 120267435 120267649 -82817883 - L1MC5 LINE L1 -33 7928 7728 2381 77 0 0 chr5 120267649 120267946 -82817586 + AluY SINE Alu 1 297 -14 1179 230 109 51 chr5 120267946 120268446 -82817086 - L1MC5 LINE L1 -233 7728 7261 2177 119 0 3 chr5 120268472 120268775 -82816757 + AluSx SINE Alu 1 302 -10 767 227 64 31 chr5 120268873 120269117 -82816415 - HsTC2 DNA Tc2 -312 1586 1158 1675 148 39 11 chr5 120269256 120269539 -82815993 - AluSx SINE Alu -21 291 1 317 271 17 51 chr5 120270825 120270944 -82814588 + CT-rich Low_complexity Low_complexity 1 114 0 216 246 0 35 chr5 120271150 120271207 -82814325 + MIR SINE MIR 16 70 -138 205 244 0 0 chr5 120271285 120271326 -82814206 - L2 LINE L2 -11 3261 3221 24 67 0 0 chr5 120272139 120272184 -82813348 + AT_rich Low_complexity Low_complexity 1 45 0 2479 68 0 0 chr5 120273440 120273749 -82811783 - AluY SINE Alu -2 309 1 375 258 50 74 chr5 120273975 120274173 -82811359 - L1MC4 LINE L1 -151 7891 7690 502 128 0 0 chr5 120274173 120274251 -82811281 - MADE1 DNA Mariner -2 78 1 375 258 50 74 chr5 120274251 120274847 -82810685 - L1MC4 LINE L1 -352 7690 7108 863 243 47 39 chr5 120275786 120276173 -82809359 + L1MC5 LINE L1 7542 7931 -30 3357 110 55 26 chr5 120276202 120276602 -82808930 + L1P5 LINE L1 5068 5504 -647 189 0 0 0 chr5 120276602 120276623 -82808909 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3357 110 55 26 chr5 120276623 120276918 -82808614 + L1P5 LINE L1 5504 5789 -362 1251 147 22 9 chr5 120276937 120277161 -82808371 - L1PB1 LINE L1 -142 6009 5783 2175 112 3 0 chr5 120277401 120277697 -82807835 - AluSc SINE Alu -12 297 1 249 309 0 21 chr5 120277741 120277838 -82807694 - L1MC4 LINE L1 -11 8031 7937 339 299 0 0 chr5 120277873 120278037 -82807495 + (TATATG)n Simple_repeat Simple_repeat 3 166 0 385 271 85 53 chr5 120278037 120278318 -82807214 - L1MC4 LINE L1 -124 7918 7629 1581 231 17 59 chr5 120278355 120278831 -82806701 - L1ME1 LINE L1 -5 6555 6100 239 177 16 0 chr5 120278841 120278903 -82806629 + LTR66 LTR ERVL 376 438 -172 317 654 0 7 chr5 120278909 120279062 -82806470 + (TA)n Simple_repeat Simple_repeat 1 152 0 1951 205 86 95 chr5 120279086 120279157 -82806375 - L1ME1 LINE L1 -1816 4724 4654 219 36 0 0 chr5 120279157 120279185 -82806347 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1812 121 3 38 chr5 120279187 120279476 -82806056 - AluSx SINE Alu -33 279 1 1951 205 86 95 chr5 120279476 120280283 -82805249 - L1ME1 LINE L1 -1887 4653 3851 718 181 90 13 chr5 120280283 120280438 -82805094 + FRAM SINE Alu 1 164 -12 3500 246 70 45 chr5 120280441 120280578 -82804954 - L1ME1 LINE L1 -2683 3857 3725 1927 81 8 4 chr5 120280578 120280837 -82804695 - AluY SINE Alu -11 300 41 3500 246 70 45 chr5 120280837 120281870 -82803662 - L1ME1 LINE L1 -2815 3725 2719 1560 204 26 10 chr5 120281870 120282174 -82803358 - AluJo SINE Alu -3 309 1 3500 246 70 45 chr5 120282174 120283449 -82802083 - L1ME1 LINE L1 -3821 2719 1280 352 0 42 0 chr5 120283449 120283497 -82802035 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3500 246 70 45 chr5 120283497 120283772 -82801760 - L1ME1 LINE L1 -5260 1280 1013 2290 77 0 17 chr5 120283904 120284202 -82801330 + AluSc SINE Alu 1 293 -16 1956 106 81 62 chr5 120285133 120285490 -82800042 - THE1B LTR MaLR 0 364 1 1421 284 31 53 chr5 120287248 120288033 -82797499 - L2 LINE L2 0 3313 2536 2014 223 99 46 chr5 120288035 120288649 -82796883 + MER82 DNA MER2_type 1 647 -6 2976 243 118 40 chr5 120288654 120288673 -82796859 - L2 LINE L2 -778 2536 2520 1956 107 6 41 chr5 120288673 120288992 -82796540 + AluSx SINE Alu 1 308 -4 2976 243 118 40 chr5 120288992 120289370 -82796162 - L2 LINE L2 -794 2520 2173 1930 37 49 4 chr5 120289370 120289613 -82795919 + AluY SINE Alu 1 254 -57 2976 243 118 40 chr5 120289613 120290251 -82795281 - L2 LINE L2 -1141 2173 1420 189 270 87 79 chr5 120290837 120290963 -82794569 - L3 LINE CR1 -260 1317 1191 675 176 0 0 chr5 120291027 120291152 -82794380 - L1MC4 LINE L1 -4 8038 7914 205 246 0 35 chr5 120291162 120291219 -82794313 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 4512 242 120 51 chr5 120291221 120293212 -82792320 - L1MC4a LINE L1 -246 7562 5435 2078 109 0 3 chr5 120293940 120294260 -82791272 - AluSg SINE Alu 0 319 1 249 305 57 71 chr5 120294383 120294524 -82791008 - MIR SINE MIR -72 190 52 1910 150 49 30 chr5 120294751 120295118 -82790414 - THE1C LTR MaLR -1 374 1 23 0 0 0 chr5 120296141 120296164 -82789368 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 120296554 120296592 -82788940 + AT_rich Low_complexity Low_complexity 1 38 0 1876 129 17 7 chr5 120297155 120297449 -82788083 - AluSx SINE Alu -13 299 3 306 268 63 21 chr5 120297724 120297914 -82787618 - MER112 DNA MER1_type -55 205 8 7279 43 7 0 chr5 120298018 120299127 -82786405 + L1PA4 LINE L1 5045 6155 0 22 35 0 0 chr5 120299200 120299229 -82786303 + AT_rich Low_complexity Low_complexity 1 29 0 278 244 103 39 chr5 120299687 120299765 -82785767 + L2 LINE L2 3185 3267 -5 221 244 0 0 chr5 120299765 120299810 -82785722 + GA-rich Low_complexity Low_complexity 4 48 0 196 281 0 47 chr5 120300133 120300197 -82785335 + L2 LINE L2 3250 3310 -3 230 343 59 10 chr5 120300548 120300650 -82784882 - L2 LINE L2 -10 3303 3197 805 122 0 54 chr5 120301143 120301290 -82784242 + MER85 DNA T2_type 1 139 0 226 320 77 22 chr5 120301367 120301559 -82783973 - MIR SINE MIR -40 222 18 824 168 91 60 chr5 120301568 120301800 -82783732 + MLT1C LTR MaLR 1 239 -228 23 0 0 0 chr5 120303731 120303754 -82781778 + AT_rich Low_complexity Low_complexity 1 23 0 1913 129 6 25 chr5 120304379 120304697 -82780835 - AluSx SINE Alu 0 312 1 600 190 18 3 chr5 120304973 120305137 -82780395 + MER20 DNA MER1_type 1 219 0 240 326 77 21 chr5 120305972 120306205 -82779327 + L1MC/D LINE L1 5310 5555 -2253 26 50 0 0 chr5 120306703 120306743 -82778789 + AT_rich Low_complexity Low_complexity 1 40 0 2855 208 15 4 chr5 120307363 120307906 -82777626 + Cheshire DNA MER1_type 1 549 -1871 1648 230 43 2 chr5 120307899 120308321 -82777211 + Cheshire DNA MER1_type 1982 2420 0 * 1838 158 0 3 chr5 120309167 120309459 -82776073 - AluSx SINE Alu -21 291 1 331 256 84 79 chr5 120309638 120309853 -82775679 - L1ME1 LINE L1 -229 5937 5722 706 225 12 30 chr5 120309872 120310041 -82775491 - MER69A DNA AcHobo -11 166 1 652 249 108 33 chr5 120310141 120310354 -82775178 + MIR SINE MIR 1 229 -33 35 0 0 0 chr5 120310429 120310464 -82775068 + AT_rich Low_complexity Low_complexity 1 35 0 1145 125 51 9 chr5 120310501 120310717 -82774815 - L1PA10 LINE L1 -4 6164 5940 216 0 0 0 chr5 120310957 120310981 -82774551 + (TA)n Simple_repeat Simple_repeat 2 25 0 2105 116 0 3 chr5 120310981 120311266 -82774266 - AluSx SINE Alu -28 284 1 469 257 90 21 chr5 120311291 120311435 -82774097 + L2 LINE L2 3158 3311 -2 195 42 0 0 chr5 120311752 120311776 -82773756 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1567 193 18 85 chr5 120312424 120312443 -82773089 - MLT1A2 LTR MaLR 0 374 355 2217 132 34 14 chr5 120312443 120312800 -82772732 - THE1B LTR MaLR 0 364 1 1567 193 18 85 chr5 120312800 120313179 -82772353 - MLT1A2 LTR MaLR -19 355 3 207 208 0 19 chr5 120313879 120313932 -82771600 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 602 333 150 44 chr5 120314069 120314751 -82770781 + L2 LINE L2 1704 2457 -857 1769 172 28 17 chr5 120314805 120315166 -82770366 - MLT1A1 LTR MaLR 0 365 1 322 146 52 0 chr5 120315771 120315867 -82769665 + (TA)n Simple_repeat Simple_repeat 2 102 0 186 313 0 0 chr5 120315935 120315983 -82769549 - MIR SINE MIR -149 113 66 21 0 0 0 chr5 120316781 120316802 -82768730 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr5 120317178 120317212 -82768320 + AT_rich Low_complexity Low_complexity 1 34 0 377 318 13 39 chr5 120317618 120317772 -82767760 - MIR3 SINE MIR -10 198 49 366 257 273 20 chr5 120317875 120318179 -82767353 - L2 LINE L2 -4 3309 2929 401 290 124 11 chr5 120369312 120369498 -82716034 + L2 LINE L2 2195 2401 -913 344 229 53 84 chr5 120369519 120369650 -82715882 + HERVL LTR ERVL 4076 4202 -1452 590 282 14 73 chr5 120369775 120369995 -82715537 + LTR16A1 LTR ERVL 248 454 -3 23 33 0 0 chr5 120370375 120370405 -82715127 + AT_rich Low_complexity Low_complexity 1 30 0 241 186 0 0 chr5 120371034 120371093 -82714439 + L1MC4 LINE L1 6647 6705 -1337 1269 204 16 4 chr5 120371668 120371923 -82713609 - L1MB7 LINE L1 -199 5985 5728 979 301 31 14 chr5 120373702 120374051 -82711481 - L2 LINE L2 -2943 371 17 261 270 20 30 chr5 120375175 120375275 -82710257 + MIR SINE MIR 16 114 -148 5066 136 57 0 chr5 120375396 120376415 -82709117 + L1PA8A LINE L1 4475 5548 -583 204 127 14 42 chr5 120376465 120376536 -82708996 + CT-rich Low_complexity Low_complexity 6 74 0 5590 72 29 60 chr5 120376544 120377438 -82708094 + SVA Other Other 1 866 -520 2361 91 0 13 chr5 120378324 120378633 -82706899 - AluSq SINE Alu -8 305 1 24 0 0 0 chr5 120378812 120378836 -82706696 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 120379347 120379368 -82706164 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 120379490 120379521 -82706011 + AT_rich Low_complexity Low_complexity 1 31 0 790 251 25 15 chr5 120379558 120379757 -82705775 - MIR SINE MIR -38 224 24 25 31 0 0 chr5 120380004 120380036 -82705496 + AT_rich Low_complexity Low_complexity 1 32 0 222 317 0 0 chr5 120380063 120380123 -82705409 - L2 LINE L2 0 3313 3254 1084 390 58 18 chr5 120380397 120380846 -82704686 - MLT1C LTR MaLR 0 467 1 347 308 51 0 chr5 120381203 120381320 -82704212 - L2 LINE L2 -8 3305 3183 213 39 0 0 chr5 120381348 120381374 -82704158 + (CATA)n Simple_repeat Simple_repeat 4 29 0 1045 330 140 10 chr5 120381503 120382241 -82703291 - L2 LINE L2 -159 3154 2329 531 276 68 16 chr5 120382689 120382881 -82702651 - MIR SINE MIR -4 258 57 392 275 88 17 chr5 120383358 120383598 -82701934 - MIR SINE MIR -4 258 2 242 358 184 6 chr5 120383636 120383815 -82701717 + MIR SINE MIR 49 259 -3 2514 43 0 3 chr5 120384578 120384881 -82700651 + AluY SINE Alu 1 302 -9 23 0 0 0 chr5 120385341 120385364 -82700168 + AT_rich Low_complexity Low_complexity 1 23 0 205 273 125 62 chr5 120387054 120387182 -82698350 - MIR3 SINE MIR -3 205 70 2682 23 3 0 chr5 120388463 120388768 -82696764 - AluYb8 SINE Alu -11 307 2 212 357 77 18 chr5 120388864 120389032 -82696500 + L2 LINE L2 565 742 -2572 266 259 65 88 chr5 120389098 120389268 -82696264 + MLT1J LTR MaLR 342 507 -4 226 164 16 16 chr5 120389907 120389968 -82695564 + (TA)n Simple_repeat Simple_repeat 2 62 0 650 211 0 0 chr5 120391396 120391519 -82694013 - FLAM_C SINE Alu -20 123 1 240 263 0 0 chr5 120391530 120391587 -82693945 + CT-rich Low_complexity Low_complexity 2 58 0 408 167 14 42 chr5 120391805 120391949 -82693583 + C-rich Low_complexity Low_complexity 2 141 0 1703 168 25 0 chr5 120391949 120392229 -82693303 - AluSx SINE Alu -25 287 1 437 258 159 0 chr5 120392363 120392495 -82693037 + MIR SINE MIR 89 241 -21 1683 116 0 0 chr5 120392926 120393158 -82692374 + AluSq SINE Alu 64 295 -18 189 0 0 0 chr5 120393278 120393299 -82692233 + (TG)n Simple_repeat Simple_repeat 2 22 0 8329 81 29 59 chr5 120393341 120395456 -82690076 - L1PA7 LINE L1 -3 6151 4079 332 221 18 106 chr5 120395566 120395679 -82689853 + MIR3 SINE MIR 85 187 -21 1406 212 49 35 chr5 120396428 120396834 -82688698 - MLT1C LTR MaLR 0 467 56 251 367 110 0 chr5 120397338 120397447 -82688085 + MIR SINE MIR 2 122 -140 25 0 0 0 chr5 120398472 120398497 -82687035 + AT_rich Low_complexity Low_complexity 1 25 0 1542 314 135 56 chr5 120398563 120399342 -82686190 - L2 LINE L2 -855 2459 1743 369 0 0 0 chr5 120399342 120399383 -82686149 + (CA)n Simple_repeat Simple_repeat 1 41 0 1542 314 135 56 chr5 120399383 120400173 -82685359 - L2 LINE L2 -1571 1743 766 301 279 57 33 chr5 120400246 120400368 -82685164 - MER103 DNA DNA -39 127 3 368 219 38 57 chr5 120400756 120400861 -82684671 - MLT1K LTR MaLR -115 473 371 33 25 0 0 chr5 120401014 120401054 -82684478 + AT_rich Low_complexity Low_complexity 1 40 0 222 204 0 0 chr5 120401374 120401423 -82684109 + A-rich Low_complexity Low_complexity 4 52 0 425 306 61 10 chr5 120401693 120401889 -82683643 + L1MCc LINE L1 26 231 -6192 438 312 63 25 chr5 120402505 120402742 -82682790 + L1MCc LINE L1 1129 1374 -5049 1582 163 102 3 chr5 120403103 120403416 -82682116 + L1MC1 LINE L1 5990 6333 0 295 296 102 9 chr5 120404574 120404682 -82680850 - MIR3 SINE MIR -7 201 84 1762 181 3 3 chr5 120405034 120405344 -82680188 - AluJo SINE Alu -1 311 2 363 23 0 0 chr5 120405420 120405464 -82680068 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr5 120405838 120405861 -82679671 + AT_rich Low_complexity Low_complexity 1 23 0 245 186 0 0 chr5 120407598 120407657 -82677875 + L1MC4 LINE L1 6647 6705 -1337 25 65 0 0 chr5 120407906 120407952 -82677580 + AT_rich Low_complexity Low_complexity 1 46 0 3638 200 45 10 chr5 120408183 120409186 -82676346 - L1MB5 LINE L1 -189 5985 4951 239 0 0 31 chr5 120409186 120409218 -82676314 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 427 200 0 0 chr5 120409220 120409300 -82676232 - AluJb SINE Alu -196 116 37 24 0 0 0 chr5 120412278 120412302 -82673230 + AT_rich Low_complexity Low_complexity 1 24 0 1975 124 20 3 chr5 120412303 120412601 -82672931 + AluSg SINE Alu 1 303 -7 665 161 34 0 chr5 120412601 120412719 -82672813 - AluJo/FLAM SINE Alu -190 122 1 255 162 0 0 chr5 120412723 120412760 -82672772 - tRNA-Leu-CTT tRNA tRNA -48 37 1 34 84 0 0 chr5 120414395 120414478 -82671054 + AT_rich Low_complexity Low_complexity 1 83 0 27 29 0 0 chr5 120416438 120416472 -82669060 + AT_rich Low_complexity Low_complexity 1 34 0 452 135 0 0 chr5 120417199 120417273 -82668259 - L1MB5 LINE L1 -9 6165 6092 205 175 25 0 chr5 120418192 120418232 -82667300 - L2 LINE L2 -4 3309 3269 298 318 11 11 chr5 120418340 120418428 -82667104 + MIR3 SINE MIR 8 95 -113 2744 115 16 5 chr5 120418599 120419024 -82666508 + L1M1 LINE L1 5327 5756 -547 343 297 95 27 chr5 120419070 120419218 -82666314 - MIR SINE MIR -31 231 74 24 53 0 0 chr5 120419442 120419480 -82666052 + AT_rich Low_complexity Low_complexity 1 38 0 528 45 0 0 chr5 120420370 120420437 -82665095 - L1MB2 LINE L1 -36 6135 6069 21 0 0 0 chr5 120421856 120421877 -82663655 + AT_rich Low_complexity Low_complexity 1 21 0 270 307 9 77 chr5 120421953 120422188 -82663344 + L2 LINE L2 2190 2488 -826 1156 153 0 0 chr5 120422236 120422406 -82663126 + AluJb SINE Alu 121 290 -22 683 306 65 25 chr5 120423630 120423953 -82661579 + L2 LINE L2 2978 3313 0 246 266 21 173 chr5 120423951 120424188 -82661344 - MIR SINE MIR -13 249 49 * 2184 129 3 0 chr5 120424591 120424900 -82660632 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr5 120425375 120425403 -82660129 + AT_rich Low_complexity Low_complexity 1 28 0 186 268 0 0 chr5 120425433 120425474 -82660058 - L2 LINE L2 -4 3309 3269 194 308 84 63 chr5 120425590 120425733 -82659799 - L2 LINE L2 -230 3083 2938 348 250 30 10 chr5 120425815 120425915 -82659617 - L2 LINE L2 -381 2932 2831 359 292 107 18 chr5 120426801 120426969 -82658563 - MIR SINE MIR -40 222 40 2335 94 3 0 chr5 120427688 120427995 -82657537 - AluSg SINE Alu -2 308 1 429 254 14 36 chr5 120428314 120428452 -82657080 - LTR27 LTR ERV1 -2 634 500 2122 172 155 50 chr5 120428463 120428789 -82656743 - LTR28 LTR ERV1 -421 599 309 2213 119 7 0 chr5 120428789 120429092 -82656440 + AluSx SINE Alu 2 306 -6 2122 172 155 50 chr5 120429092 120429307 -82656225 - LTR28 LTR ERV1 -711 309 1 2076 120 7 10 chr5 120429415 120429714 -82655818 + AluSx SINE Alu 1 298 -14 284 291 25 20 chr5 120429829 120430028 -82655504 + L1MC4a LINE L1 2975 3174 -2972 22 0 0 0 chr5 120430055 120430077 -82655455 + AT_rich Low_complexity Low_complexity 1 22 0 1321 273 74 31 chr5 120430162 120430767 -82654765 + L1MC4a LINE L1 5307 5937 -1871 288 276 70 42 chr5 120431016 120431230 -82654302 + L1ME4a LINE L1 5819 6038 -83 2226 80 0 17 chr5 120431495 120431828 -82653704 - AluY SINE Alu 0 328 1 470 129 14 0 chr5 120432505 120432575 -82652957 + AluJ/FLAM SINE Alu 1 71 -241 216 0 0 0 chr5 120432581 120432605 -82652927 + (A)n Simple_repeat Simple_repeat 1 24 0 27 0 0 0 chr5 120433303 120433330 -82652202 + AT_rich Low_complexity Low_complexity 1 27 0 284 352 56 24 chr5 120435373 120435498 -82650034 - L2 LINE L2 -7 3265 3137 2123 212 60 25 chr5 120435798 120436218 -82649314 + MLT1D LTR MaLR 3 444 -61 3713 66 29 0 chr5 120436218 120436704 -82648828 + L1PA8 LINE L1 5669 6168 -4 2123 212 60 25 chr5 120436704 120436769 -82648763 + MLT1D LTR MaLR 444 505 0 543 348 124 35 chr5 120436769 120437376 -82648156 - L2 LINE L2 -468 2846 2186 1372 138 75 4 chr5 120437779 120438019 -82647513 - Tigger2 DNA MER2_type 0 2718 2462 4434 142 35 3 chr5 120438086 120438807 -82646725 - Tigger2 DNA MER2_type -1974 744 1 1671 172 17 3 chr5 120439118 120439420 -82646112 - AluJb SINE Alu -6 306 1 221 191 0 0 chr5 120439911 120439953 -82645579 + L2 LINE L2 3269 3310 -3 187 264 264 0 chr5 120440555 120440642 -82644890 + MIR SINE MIR 81 190 -72 24 53 0 0 chr5 120440793 120440831 -82644701 + AT_rich Low_complexity Low_complexity 1 38 0 297 295 74 0 chr5 120441178 120441273 -82644259 - MER5A DNA MER1_type -87 102 1 707 178 59 0 chr5 120442215 120442350 -82643182 - Tigger1 DNA MER2_type -2275 143 1 951 261 80 4 chr5 120442863 120443101 -82642431 - MIR SINE MIR -5 257 2 992 216 0 0 chr5 120443284 120443469 -82642063 + MER5A DNA MER1_type 1 185 -4 225 197 158 13 chr5 120444111 120444187 -82641345 + MIR SINE MIR 104 190 -72 377 283 189 0 chr5 120444248 120444354 -82641178 + L2 LINE L2 3147 3272 0 375 235 113 17 chr5 120445200 120445315 -82640217 - L2 LINE L2 -1 3312 3187 10585 176 15 20 chr5 120447182 120448907 -82636625 - L1PB1 LINE L1 -2 6149 4417 2359 102 0 0 chr5 120448907 120449211 -82636321 + AluSq SINE Alu 1 304 -9 10585 176 15 20 chr5 120449211 120449267 -82636265 - L1PB1 LINE L1 -1734 4417 4362 216 0 0 0 chr5 120449267 120449291 -82636241 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 10585 176 15 20 chr5 120449291 120450870 -82634662 - L1PB1 LINE L1 -1789 4362 2798 21 57 0 0 chr5 120451138 120451173 -82634359 + AT_rich Low_complexity Low_complexity 1 35 0 224 151 0 19 chr5 120452768 120452821 -82632711 + (TA)n Simple_repeat Simple_repeat 2 53 0 200 309 0 0 chr5 120453538 120453593 -82631939 - L3b LINE CR1 -339 1244 1190 23 0 0 0 chr5 120453606 120453629 -82631903 + AT_rich Low_complexity Low_complexity 1 23 0 6980 56 6 41 chr5 120453629 120455338 -82630194 - SVA Other Other -683 1375 1 396 133 0 0 chr5 120455341 120455424 -82630108 + (GGGAGA)n Simple_repeat Simple_repeat 5 87 0 8570 126 18 1 chr5 120455479 120457008 -82628524 - L1P4 LINE L1 -620 5548 3996 8313 91 21 13 chr5 120457011 120458888 -82626644 - L1PA7 LINE L1 -2 6467 4575 1967 59 4 48 chr5 120458888 120459158 -82626374 + AluY SINE Alu 41 298 -13 8313 91 21 13 chr5 120459158 120459329 -82626203 - L1PA7 LINE L1 -1894 4575 4407 6210 128 14 19 chr5 120459329 120460318 -82625214 - L1PA7 LINE L1 -5468 993 10 1881 122 3 0 chr5 120460321 120460615 -82624917 - L1P4 LINE L1 -2134 4012 3718 23 33 0 0 chr5 120461105 120461135 -82624397 + AT_rich Low_complexity Low_complexity 1 30 0 470 308 72 29 chr5 120461135 120461578 -82623954 - L1ME LINE L1 -371 5791 5331 19574 35 11 2 chr5 120462157 120465350 -82620182 + L1PA4 LINE L1 2918 6152 -3 343 319 52 32 chr5 120465350 120465421 -82620111 + L1M1 LINE L1 5348 5416 -755 1662 201 0 0 chr5 120465421 120465714 -82619818 + AluJo SINE Alu 1 293 -19 343 319 52 32 chr5 120465714 120465922 -82619610 + L1M1 LINE L1 5416 5647 -524 393 241 30 15 chr5 120465929 120466062 -82619470 - MER3 DNA MER1_type -73 136 2 426 282 151 10 chr5 120466069 120466367 -82619165 + L1ME4a LINE L1 5599 5938 -183 28 0 0 0 chr5 120466367 120466395 -82619137 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 120466578 120466600 -82618932 + AT_rich Low_complexity Low_complexity 1 22 0 552 301 144 40 chr5 120466663 120467058 -82618474 - LTR33 LTR ERVL -62 459 24 183 139 0 0 chr5 120467092 120467128 -82618404 + (TG)n Simple_repeat Simple_repeat 2 37 0 198 369 0 29 chr5 120467792 120467895 -82617637 - MIR SINE MIR -69 193 94 2191 118 19 0 chr5 120467977 120468299 -82617233 + THE1B LTR MaLR 37 364 0 492 232 30 43 chr5 120469034 120469198 -82616334 - L1ME1 LINE L1 -6 6160 5999 2170 216 36 36 chr5 120469221 120469804 -82615728 - L1ME1 LINE L1 -235 5931 5349 2120 84 40 0 chr5 120470422 120470724 -82614808 + AluSp SINE Alu 1 313 0 2093 104 48 0 chr5 120470768 120471057 -82614475 - AluSx SINE Alu -9 303 1 293 252 97 0 chr5 120471367 120471470 -82614062 - MLT1G1 LTR MaLR 0 595 483 701 270 21 18 chr5 120471609 120471818 -82613714 - MLT1H LTR MaLR -305 244 40 2240 90 27 0 chr5 120471881 120472180 -82613352 - AluY SINE Alu -4 307 1 183 312 104 72 chr5 120472272 120472493 -82613039 + L2 LINE L2 2309 2536 -778 441 261 51 93 chr5 120472625 120472936 -82612596 - L1ME4a LINE L1 0 6121 5824 216 319 0 0 chr5 120473626 120473695 -82611837 + L2 LINE L2 2896 2964 -350 24 0 0 0 chr5 120474781 120474805 -82610727 + AT_rich Low_complexity Low_complexity 1 24 0 8320 24 1 0 chr5 120474805 120476557 -82608975 - L1PA3 LINE L1 -3 6152 4402 904 47 0 0 chr5 120476557 120476664 -82608868 - U6 snRNA snRNA 0 107 1 388 306 43 89 chr5 120477162 120477397 -82608135 - L2 LINE L2 0 3272 3049 671 211 86 40 chr5 120478493 120478806 -82606726 + MLT1B LTR MaLR 1 390 0 245 306 153 8 chr5 120480214 120480338 -82605194 + MIR SINE MIR 4 145 -117 928 216 23 0 chr5 120481232 120481408 -82604124 + MER5A DNA MER1_type 7 186 -3 21 0 0 0 chr5 120481554 120481575 -82603957 + AT_rich Low_complexity Low_complexity 1 21 0 257 250 174 0 chr5 120481692 120481836 -82603696 + MARNA DNA Mariner 167 335 -251 288 279 59 15 chr5 120483604 120483740 -82601792 - L2 LINE L2 -71 3242 3101 1018 341 85 20 chr5 120483773 120484324 -82601208 + MER115 DNA AcHobo 60 646 -47 247 374 46 23 chr5 120484364 120484495 -82601037 - L2 LINE L2 -232 3081 2948 1399 310 33 26 chr5 120484576 120485185 -82600347 - L2 LINE L2 -452 2862 2250 201 322 35 35 chr5 120485185 120485272 -82600260 + L2 LINE L2 2889 2975 -339 438 240 67 0 chr5 120485426 120485530 -82600002 + L2 LINE L2 3203 3313 0 853 297 42 0 chr5 120485644 120485880 -82599652 - MIR SINE MIR 0 262 17 9446 22 0 0 chr5 120486481 120487583 -82597949 - L1P LINE L1 -1131 5015 3914 1997 90 8 8 chr5 120488436 120488702 -82596830 - AluSq SINE Alu -47 266 1 231 385 11 11 chr5 120490221 120490312 -82595220 + MIR SINE MIR 1 91 -171 412 286 123 23 chr5 120490343 120490621 -82594911 - MER68 LTR ERV1 -7 555 283 642 167 71 16 chr5 120490940 120490970 -82594562 - FLAM_C SINE Alu 0 353 326 1179 28 0 0 chr5 120490970 120491112 -82594420 - L1PA3 LINE L1 0 6155 6014 642 167 71 16 chr5 120491112 120491286 -82594246 - FLAM_C SINE Alu -27 326 1 4016 234 59 23 chr5 120491289 120493108 -82592424 - L1MDb LINE L1 -4614 1792 42 561 210 70 21 chr5 120494116 120494259 -82591273 + LTR16C LTR ERVL 342 491 0 1802 126 14 49 chr5 120495565 120495913 -82589619 - L1MA7 LINE L1 0 6291 5956 21 0 0 0 chr5 120496650 120496671 -82588861 + AT_rich Low_complexity Low_complexity 1 21 0 2313 222 80 54 chr5 120496678 120496757 -82588775 - L1ME2 LINE L1 -9 6155 6080 1576 94 19 0 chr5 120496757 120496969 -82588563 - AluSc SINE Alu -8 301 86 2313 222 80 54 chr5 120496969 120498018 -82587514 - L1ME2 LINE L1 -84 6080 5006 224 222 30 10 chr5 120498334 120498433 -82587099 + CT-rich Low_complexity Low_complexity 3 103 0 22 0 0 0 chr5 120499704 120499726 -82585806 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 120499881 120499911 -82585621 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 120500477 120500499 -82585033 + AT_rich Low_complexity Low_complexity 1 22 0 6773 278 124 23 chr5 120501032 120503979 -82581553 - L2 LINE L2 -4 3309 80 30 45 0 0 chr5 120505214 120505258 -82580274 + AT_rich Low_complexity Low_complexity 1 44 0 2368 94 0 0 chr5 120505415 120505713 -82579819 + AluSc SINE Alu 2 299 -10 2329 74 0 10 chr5 120505906 120506204 -82579328 - AluY SINE Alu -16 295 1 24 77 0 0 chr5 120506524 120506576 -82578956 + AT_rich Low_complexity Low_complexity 1 52 0 267 211 26 44 chr5 120506763 120506877 -82578655 + (CATATA)n Simple_repeat Simple_repeat 6 117 0 183 179 45 0 chr5 120506975 120507042 -82578490 + (TA)n Simple_repeat Simple_repeat 1 70 0 370 175 25 25 chr5 120507291 120507371 -82578161 - LTR45 LTR ERV1 -2 523 444 23 0 0 0 chr5 120508063 120508086 -82577446 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 120508239 120508269 -82577263 + AT_rich Low_complexity Low_complexity 1 30 0 1854 185 9 9 chr5 120508321 120508662 -82576870 - MER2 DNA MER2_type -2 342 2 871 153 0 15 chr5 120509320 120509457 -82576075 - AluJo SINE Alu -176 136 2 23 0 0 0 chr5 120509837 120509860 -82575672 + AT_rich Low_complexity Low_complexity 1 23 0 445 240 57 70 chr5 120510629 120510858 -82574674 - L1MC/D LINE L1 -1990 5818 5593 1845 241 46 2 chr5 120510865 120511297 -82574235 - MLT1E2 LTR MaLR 0 626 176 444 173 156 69 chr5 120514384 120514557 -82570975 - MLT1E2 LTR MaLR -438 188 1 1370 187 47 13 chr5 120514573 120514829 -82570703 - Charlie1 DNA MER1_type -492 2269 2000 2060 117 13 7 chr5 120514829 120515127 -82570405 + AluSg SINE Alu 1 300 -10 1370 187 47 13 chr5 120515127 120515169 -82570363 - Charlie1 DNA MER1_type -761 2000 1961 2595 217 71 25 chr5 120515188 120515416 -82570116 - L1ME1 LINE L1 -137 6029 5813 2451 50 7 3 chr5 120515416 120515715 -82569817 - AluY SINE Alu -11 300 1 2595 217 71 25 chr5 120515715 120516728 -82568804 - L1ME1 LINE L1 -353 5813 4733 2433 201 25 9 chr5 120516728 120517229 -82568303 + L1 LINE L1 4821 5334 -839 1476 174 30 43 chr5 120517229 120517533 -82567999 + AluJb SINE Alu 1 300 -12 2433 201 25 9 chr5 120517533 120517561 -82567971 + L1 LINE L1 5334 5360 -813 4231 211 36 12 chr5 120517575 120518564 -82566968 + L1MA9 LINE L1 5262 6274 -38 972 257 53 6 chr5 120518566 120518885 -82566647 - L1ME1 LINE L1 -1393 4753 4420 902 242 80 0 chr5 120518900 120519214 -82566318 + L1MB8 LINE L1 3030 3368 -2778 702 134 42 0 chr5 120519217 120519336 -82566196 - FRAM SINE Alu -14 162 39 2597 232 52 21 chr5 120519337 120520112 -82565420 + L1MB8 LINE L1 3374 4172 -1974 2241 97 0 22 chr5 120520445 120520764 -82564768 - AluSx SINE Alu 0 312 1 1663 70 0 23 chr5 120521043 120521258 -82564274 + AluSc SINE Alu 77 286 -23 2200 230 108 8 chr5 120521403 120522015 -82563517 + L1MB8 LINE L1 5490 6159 -7 445 246 0 49 chr5 120522038 120522160 -82563372 + MIR SINE MIR 26 141 -121 1971 110 0 7 chr5 120522163 120522435 -82563097 + AluSc SINE Alu 36 305 -4 242 56 28 0 chr5 120522462 120522498 -82563034 + (TG)n Simple_repeat Simple_repeat 2 38 0 206 245 19 0 chr5 120522498 120522551 -82562981 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 207 247 22 90 chr5 120523144 120523233 -82562299 - MIR SINE MIR -110 152 70 270 0 0 0 chr5 120523747 120523777 -82561755 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 1833 164 0 10 chr5 120523965 120524263 -82561269 + AluSx SINE Alu 1 295 -17 25 31 0 0 chr5 120526683 120526715 -82558817 + AT_rich Low_complexity Low_complexity 1 32 0 353 205 13 0 chr5 120527300 120527378 -82558154 + AluJ/FLAM SINE Alu 2 80 -222 513 337 131 25 chr5 120528471 120528901 -82556631 - L2 LINE L2 -15 3257 2788 405 102 0 0 chr5 120528952 120529011 -82556521 + (TTG)n Simple_repeat Simple_repeat 2 60 0 343 221 123 36 chr5 120529146 120529341 -82556191 - L1MC4a LINE L1 -1800 6008 5797 21 0 0 0 chr5 120529623 120529644 -82555888 + AT_rich Low_complexity Low_complexity 1 21 0 2091 121 0 0 chr5 120529905 120530203 -82555329 - AluSg SINE Alu -9 301 4 471 333 114 0 chr5 120530333 120530534 -82554998 + MIR SINE MIR 29 252 -10 216 312 110 9 chr5 120532269 120532378 -82553154 - MIR SINE MIR -110 152 33 1478 224 17 19 chr5 120532833 120533194 -82552338 - L1MD3 LINE L1 -183 7812 7453 399 94 0 167 chr5 120534046 120534142 -82551390 + MADE1 DNA Mariner 1 80 0 1626 225 52 48 chr5 120534426 120534884 -82550648 - MLT1C LTR MaLR 0 467 8 480 179 0 4 chr5 120535422 120535566 -82549966 + MER8 DNA MER2_type 40 238 -1 22 35 0 0 chr5 120535612 120535641 -82549891 + AT_rich Low_complexity Low_complexity 1 29 0 684 280 59 21 chr5 120535834 120536070 -82549462 - MIR SINE MIR -16 246 2 2329 75 20 0 chr5 120537153 120537447 -82548085 - AluY SINE Alu -11 300 1 1764 157 3 29 chr5 120538150 120538462 -82547070 - AluJb SINE Alu -8 304 1 230 281 0 0 chr5 120539639 120539696 -82545836 - MIR SINE MIR -101 161 105 35 54 0 0 chr5 120542115 120542171 -82543361 + AT_rich Low_complexity Low_complexity 1 56 0 264 392 67 0 chr5 120542796 120542916 -82542616 - MIR3 SINE MIR -27 181 54 714 329 46 11 chr5 120545010 120545293 -82540239 - L3 LINE CR1 -892 685 393 1028 235 43 4 chr5 120545332 120545729 -82539803 + LTR40c LTR ERVL 1 465 0 607 235 50 59 chr5 120545729 120545967 -82539565 - L1ME3A LINE L1 -17 6153 5918 * 5696 258 78 39 chr5 120545965 120546111 -82539421 - L1ME3A LINE L1 -743 5403 5264 686 117 17 33 chr5 120546111 120546231 -82539301 + L1MB2 LINE L1 6052 6169 -2 5696 258 78 39 chr5 120546231 120548499 -82537033 - L1ME3A LINE L1 -882 5264 2862 1987 162 71 0 chr5 120548499 120548863 -82536669 - MLT1B LTR MaLR 0 390 1 5696 258 78 39 chr5 120548863 120549266 -82536266 - L1ME3A LINE L1 -3284 2862 2476 317 306 105 36 chr5 120549667 120549886 -82535646 - MER112 DNA MER1_type -6 254 21 680 346 86 25 chr5 120551231 120551627 -82533905 + L1M3c LINE L1 3 422 -5719 2036 254 35 11 chr5 120552027 120552649 -82532883 + L1M3c LINE L1 917 1553 -4588 1972 258 70 48 chr5 120552639 120553459 -82532073 + MLT-int LTR MaLR 441 1328 -407 * 308 217 14 0 chr5 120553539 120553608 -82531924 + MLT1A1 LTR MaLR 47 116 -249 24 32 0 0 chr5 120553608 120553639 -82531893 + AT_rich Low_complexity Low_complexity 1 31 0 291 207 0 186 chr5 120553710 120553850 -82531682 + MLT1A1 LTR MaLR 161 274 -91 4151 203 41 22 chr5 120553856 120555004 -82530528 + L1MB2 LINE L1 5005 6169 -2 23 54 0 0 chr5 120555201 120555238 -82530294 + AT_rich Low_complexity Low_complexity 1 37 0 325 238 157 41 chr5 120556037 120556184 -82529348 - MER46A DNA MER2_type -70 166 3 * 991 147 173 10 chr5 120556055 120556252 -82529280 + MER46A DNA MER2_type 1 229 -7 1081 217 18 9 chr5 120556272 120556493 -82529039 - MER58A DNA MER1_type 0 224 2 361 260 0 0 chr5 120556554 120556627 -82528905 + MIR3 SINE MIR 121 193 -15 22 0 0 0 chr5 120558003 120558025 -82527507 + AT_rich Low_complexity Low_complexity 1 22 0 298 341 115 16 chr5 120558398 120558580 -82526952 - MLT1K LTR MaLR -366 222 23 185 128 21 0 chr5 120558681 120558728 -82526804 + (TA)n Simple_repeat Simple_repeat 1 48 0 382 313 203 18 chr5 120558746 120558963 -82526569 - MIR SINE MIR 0 262 6 615 204 22 0 chr5 120560972 120561109 -82524423 + MER3 DNA MER1_type 31 123 -86 1273 140 70 73 chr5 120561110 120561495 -82524037 + MER3 DNA MER1_type 2234 2617 0 412 275 129 12 chr5 120564093 120564264 -82521268 + MER117 DNA MER1_type 7 197 0 2462 60 0 3 chr5 120566467 120566767 -82518765 - AluY SINE Alu -12 299 1 423 0 0 0 chr5 120566955 120567002 -82518530 + (TG)n Simple_repeat Simple_repeat 2 48 0 197 81 0 27 chr5 120567196 120567233 -82518299 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 254 310 92 0 chr5 120567319 120567406 -82518126 - MIR SINE MIR -78 130 36 263 254 0 45 chr5 120567474 120567541 -82517991 - MIR SINE MIR -2 260 197 338 293 40 10 chr5 120567548 120567647 -82517885 + L2 LINE L2 3193 3294 -19 462 312 32 7 chr5 120567666 120567820 -82517712 - MIR SINE MIR -103 159 2 1784 127 14 3 chr5 120569048 120569332 -82516200 - L1PA14 LINE L1 0 6161 5875 544 260 136 0 chr5 120569835 120570004 -82515528 - MIR SINE MIR -11 251 60 303 303 11 11 chr5 120570824 120570913 -82514619 + MIR SINE MIR 8 96 -166 300 293 0 0 chr5 120570998 120571080 -82514452 + (TA)n Simple_repeat Simple_repeat 1 82 0 303 297 125 8 chr5 120571097 120571225 -82514307 + L2 LINE L2 3171 3313 0 197 196 137 0 chr5 120571226 120571277 -82514255 + MIR SINE MIR 97 154 -108 610 279 180 35 chr5 120571857 120572301 -82513231 - L2 LINE L2 -41 3272 2754 1154 22 0 0 chr5 120572374 120572512 -82513020 - L1PA4 LINE L1 -3 6152 6015 269 318 47 0 chr5 120572596 120572681 -82512851 - L2 LINE L2 -20 3252 3164 568 104 0 0 chr5 120573173 120573250 -82512282 - MADE1 DNA Mariner -1 79 3 1608 128 219 17 chr5 120573271 120573622 -82511910 - MSTA LTR MaLR -3 425 4 235 294 65 11 chr5 120575348 120575440 -82510092 + L2 LINE L2 3155 3251 -21 22 35 0 0 chr5 120576084 120576113 -82509419 + AT_rich Low_complexity Low_complexity 1 29 0 758 233 48 34 chr5 120576260 120576466 -82509066 - MER58A DNA MER1_type -12 212 4 183 220 0 0 chr5 120576683 120576733 -82508799 + CT-rich Low_complexity Low_complexity 4 53 0 25 31 0 0 chr5 120576818 120576850 -82508682 + AT_rich Low_complexity Low_complexity 1 32 0 210 358 83 0 chr5 120576952 120577072 -82508460 - L2 LINE L2 -706 2608 2479 288 0 0 0 chr5 120577376 120577408 -82508124 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 120577651 120577674 -82507858 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 120578149 120578177 -82507355 + AT_rich Low_complexity Low_complexity 1 28 0 17655 31 3 3 chr5 120579266 120581431 -82504101 - L1P LINE L1 -1529 4617 2452 14338 172 29 16 chr5 120581427 120584880 -82500652 - L1M1 LINE L1 -735 6989 3480 * 2296 74 3 3 chr5 120584880 120585177 -82500355 - AluY SINE Alu -14 297 1 14338 172 29 16 chr5 120585177 120585454 -82500078 - L1M1 LINE L1 -4244 3480 3208 1646 164 25 14 chr5 120585675 120585955 -82499577 + AluJb SINE Alu 6 288 -24 315 0 0 0 chr5 120586310 120586345 -82499187 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2578 55 0 0 chr5 120586487 120586795 -82498737 + AluY SINE Alu 1 308 -3 309 262 165 0 chr5 120587275 120587378 -82498154 + MIR SINE MIR 132 251 -11 29 28 0 0 chr5 120588226 120588262 -82497270 + AT_rich Low_complexity Low_complexity 1 36 0 349 314 188 36 chr5 120588368 120588677 -82496855 - L2 LINE L2 -1 3312 2957 2114 102 6 19 chr5 120589114 120589427 -82496105 - AluSc SINE Alu 0 309 1 185 182 30 0 chr5 120590240 120590273 -82495259 - L3b LINE CR1 -271 1312 1279 21 89 0 0 chr5 120590432 120590488 -82495044 + AT_rich Low_complexity Low_complexity 1 56 0 387 268 89 38 chr5 120590493 120590706 -82494826 + L1ME LINE L1 4577 4800 -1346 570 283 36 9 chr5 120591410 120591633 -82493899 + L1ME LINE L1 5521 5749 -372 21 0 0 0 chr5 120591702 120591723 -82493809 + AT_rich Low_complexity Low_complexity 1 21 0 1011 162 32 176 chr5 120592152 120592528 -82493004 - MER33 DNA MER1_type -2 322 1 285 236 225 11 chr5 120592531 120592620 -82492912 + L2 LINE L2 3192 3299 -14 338 349 74 34 chr5 120592972 120593322 -82492210 - L3b LINE CR1 -86 1497 1134 239 263 147 21 chr5 120593703 120593798 -82491734 + MIR SINE MIR 156 262 0 467 205 134 0 chr5 120594064 120594176 -82491356 - L2 LINE L2 0 3313 3187 25 0 0 0 chr5 120596165 120596190 -82489342 + AT_rich Low_complexity Low_complexity 1 25 0 386 319 22 0 chr5 120596642 120596733 -82488799 + L2 LINE L2 3132 3224 -48 1085 208 33 17 chr5 120596917 120597158 -82488374 - MIR SINE MIR 0 262 18 335 191 15 0 chr5 120597187 120597255 -82488277 - MER116 DNA Mariner -11 69 1 1734 128 0 110 chr5 120597698 120598033 -82487499 + AluSx SINE Alu 2 299 -3 247 233 150 0 chr5 120598330 120598390 -82487142 - MIR SINE MIR -71 191 123 468 219 69 2 chr5 120600009 120600231 -82485301 + L1MA9 LINE L1 5959 6290 -22 445 303 56 80 chr5 120600470 120600843 -82484689 - L2 LINE L2 -680 2634 2271 879 97 0 0 chr5 120601062 120601186 -82484346 - AluY SINE Alu -2 309 186 575 300 138 16 chr5 120603202 120603565 -82481967 - MLT1I LTR MaLR 0 409 3 244 346 13 0 chr5 120604262 120604340 -82481192 - L2 LINE L2 -3 3310 3232 346 265 66 24 chr5 120605250 120605416 -82480116 + L2 LINE L2 3021 3193 -120 237 33 0 0 chr5 120605420 120605450 -82480082 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 506 169 0 0 chr5 120605453 120605542 -82479990 - FLAM_A SINE Alu -35 107 19 194 81 27 0 chr5 120605575 120605612 -82479920 + (TA)n Simple_repeat Simple_repeat 2 39 0 269 257 71 14 chr5 120605703 120605773 -82479759 + L2 LINE L2 3178 3251 -62 200 125 75 0 chr5 120606313 120606353 -82479179 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 642 63 48 0 chr5 120607905 120608031 -82477501 + (TA)n Simple_repeat Simple_repeat 2 133 0 756 293 72 54 chr5 120608919 120609418 -82476114 + L1ME4a LINE L1 5382 5889 -232 240 35 0 0 chr5 120609516 120609545 -82475987 + (TA)n Simple_repeat Simple_repeat 2 30 0 240 59 0 0 chr5 120609545 120609579 -82475953 + (GA)n Simple_repeat Simple_repeat 1 34 0 1989 141 3 6 chr5 120611582 120611895 -82473637 + MER1B DNA MER1_type 28 339 0 306 228 87 11 chr5 120615073 120615165 -82470367 + HAL1b LINE L1 1247 1345 -3 736 194 222 9 chr5 120615355 120615571 -82469961 - MIR SINE MIR 0 262 1 280 258 0 0 chr5 120615579 120615641 -82469891 + MIR SINE MIR 92 153 -55 252 120 0 4 chr5 120616421 120616466 -82469066 - MLT1D LTR MaLR 0 626 462 243 228 87 87 chr5 120616570 120616662 -82468870 - MLT1I LTR MaLR -2 407 316 252 257 86 0 chr5 120616864 120616934 -82468598 - MLT1I LTR MaLR -300 109 34 732 364 85 18 chr5 120617268 120617716 -82467816 + L3 LINE CR1 60 537 -1040 629 340 183 22 chr5 120617770 120618649 -82466883 - L2 LINE L2 -497 2817 1797 3243 200 126 6 chr5 120668877 120669785 -82415747 + L1 LINE L1 2219 3235 -2911 13371 46 10 1 chr5 120669863 120671676 -82413856 - L1P3 LINE L1 -597 5557 3731 7949 35 2 1 chr5 120671777 120672815 -82412717 + L1HS LINE L1 5116 6155 0 266 352 8 8 chr5 120673696 120673821 -82411711 - MIR3 SINE MIR -7 201 77 251 250 28 14 chr5 120673956 120674028 -82411504 + MLT2C1 LTR ERVL 1 73 -324 2409 228 17 41 chr5 120674034 120674618 -82410914 + L1M3e LINE L1 1 570 -6460 1369 153 85 53 chr5 120674875 120675395 -82410137 - MER54A LTR ERVL -162 482 73 1306 196 38 0 chr5 120675396 120675636 -82409896 + AluJb SINE Alu 1 249 -63 601 75 32 21 chr5 120675636 120675730 -82409802 - MER54A LTR ERVL -806 95 1 715 58 0 0 chr5 120676223 120676310 -82409222 + AluSp/q SINE Alu 207 293 -20 2091 128 3 7 chr5 120677012 120677310 -82408222 + AluSx SINE Alu 15 311 -1 570 224 0 0 chr5 120677337 120677453 -82408079 + MER73 LTR ERVL 529 644 0 2299 225 75 15 chr5 120677964 120678643 -82406889 - L1MC4 LINE L1 -1 8041 7240 1425 191 116 6 chr5 120678645 120678990 -82406542 - L1MC4 LINE L1 -954 7088 6706 1502 94 36 9 chr5 120679001 120679224 -82406308 + MER50 LTR ERV1 1 229 -505 * 1631 147 58 24 chr5 120679218 120679510 -82406022 + MER50 LTR ERV1 433 734 0 538 290 22 8 chr5 120679517 120679716 -82405816 - L1MC4 LINE L1 -1353 6642 6445 1473 124 55 0 chr5 120681202 120681420 -82404112 - MER30 DNA MER1_type 0 230 1 295 253 13 13 chr5 120682041 120682116 -82403416 - MER5A DNA MER1_type -10 179 105 21 57 0 0 chr5 120682293 120682328 -82403204 + AT_rich Low_complexity Low_complexity 1 35 0 210 286 41 10 chr5 120682919 120683017 -82402515 - L2 LINE L2 -705 2609 2509 309 102 0 20 chr5 120684056 120684105 -82401427 + MSTA LTR MaLR 8 55 -373 914 136 93 0 chr5 120684111 120684273 -82401259 + MSTA-int LTR MaLR 1475 1651 0 2032 182 20 48 chr5 120684273 120684452 -82401080 + MSTA LTR MaLR 1 183 -245 2232 86 3 43 chr5 120684452 120684672 -82400860 + L1PB1 LINE L1 5814 6016 -135 2511 50 7 3 chr5 120684672 120684973 -82400559 + AluY SINE Alu 1 302 -9 2232 86 3 43 chr5 120684973 120685100 -82400432 + L1PB1 LINE L1 6016 6147 -4 2032 182 20 48 chr5 120685100 120685360 -82400172 + MSTA LTR MaLR 183 428 0 200 273 80 80 chr5 120685382 120685476 -82400056 + L2 LINE L2 3156 3252 -61 2185 189 108 36 chr5 120685476 120686057 -82399475 + MLT1E3 LTR MaLR 2 624 0 200 273 80 80 chr5 120686057 120686112 -82399420 + L2 LINE L2 3251 3305 -8 2532 96 33 6 chr5 120686564 120686929 -82398603 + THE1C LTR MaLR 1 375 0 374 238 0 0 chr5 120691598 120691678 -82393854 - HAL1 LINE L1 -882 1625 1546 1132 189 33 0 chr5 120691768 120691980 -82393552 - MER20 DNA MER1_type 0 219 1 1385 201 146 23 chr5 120692009 120692435 -82393097 + MLT1D LTR MaLR 1 497 -8 602 352 31 31 chr5 120692509 120692895 -82392637 + ERVL LTR ERVL 4677 5062 -702 558 292 55 66 chr5 120693292 120693747 -82391785 + LTR16A LTR ERVL 1 450 0 1684 196 67 58 chr5 120693747 120694243 -82391289 + L1ME2 LINE L1 5662 6161 -3 2156 118 16 0 chr5 120696116 120696420 -82389112 + AluSp SINE Alu 1 309 -4 330 243 0 0 chr5 120696423 120696526 -82389006 + A-rich Low_complexity Low_complexity 1 103 0 2152 124 7 0 chr5 120697413 120697711 -82387821 + AluSx SINE Alu 1 300 -12 765 243 131 74 chr5 120697911 120698462 -82387070 + MLT1K LTR MaLR 3 584 -4 1133 129 12 6 chr5 120699016 120699187 -82386345 - AluSg/x SINE Alu -13 299 128 542 217 161 0 chr5 120699509 120699670 -82385862 + LTR33 LTR ERVL 3 189 -332 348 269 135 21 chr5 120699677 120699870 -82385662 + LTR33 LTR ERVL 290 504 -17 234 238 24 24 chr5 120701629 120701713 -82383819 - L3b LINE CR1 -247 1336 1253 454 254 18 18 chr5 120701815 120701929 -82383603 + MLT1K LTR MaLR 327 440 -148 402 306 40 23 chr5 120702009 120702182 -82383350 - MER5B DNA MER1_type -2 176 1 242 357 83 6 chr5 120702241 120702398 -82383134 - L3 LINE CR1 -129 1448 1280 1706 158 36 7 chr5 120703385 120703664 -82381868 + AluJo SINE Alu 1 287 -25 210 281 207 44 chr5 120706064 120706553 -82378979 - L2 LINE L2 0 3313 2740 448 284 45 23 chr5 120707867 120708043 -82377489 - L2 LINE L2 -1348 1966 1787 1298 263 51 44 chr5 120710259 120710669 -82374863 - LTR16C LTR ERVL 0 491 79 219 186 0 0 chr5 120710754 120710797 -82374735 + CT-rich Low_complexity Low_complexity 1 43 0 187 114 86 0 chr5 120710900 120710935 -82374597 - MIR SINE MIR -10 252 215 3266 91 27 45 chr5 120711931 120712481 -82373051 - L1MA2 LINE L1 0 6304 5765 2358 116 26 13 chr5 120712485 120712865 -82372667 - L1PB3 LINE L1 -1 6153 5769 19137 174 42 19 chr5 120712865 120713879 -82371653 - L1PA13 LINE L1 -20 6794 5806 1649 96 0 17 chr5 120713879 120714137 -82371395 - AluSc SINE Alu 0 309 64 19137 174 42 19 chr5 120714137 120718362 -82367170 - L1PA13 LINE L1 -1008 5806 1396 888 302 125 0 chr5 120718365 120718686 -82366846 - L1PA13 LINE L1 -5529 1258 898 2328 252 46 0 chr5 120718707 120719183 -82366349 - L1PA13 LINE L1 -5951 836 339 * 5303 171 44 7 chr5 120719181 120720504 -82365028 - L1PA12 LINE L1 -5577 2004 106 287 191 132 0 chr5 120720505 120720573 -82364959 - LTR50 LTR ERVL -361 434 358 10861 174 40 106 chr5 120720644 120722007 -82363525 - L1P5 LINE L1 -372 6498 5047 2142 120 3 3 chr5 120722007 120722306 -82363226 - AluSg SINE Alu -11 299 1 10861 174 40 106 chr5 120722306 120722503 -82363029 - L1P5 LINE L1 -1823 5047 4839 2226 73 14 3 chr5 120722503 120722791 -82362741 + MER11A LTR ERVK 976 1266 0 10861 174 40 106 chr5 120722791 120725400 -82360132 - L1P5 LINE L1 -2031 4839 2326 1921 162 106 27 chr5 120725421 120725922 -82359610 + MLT2A2 LTR ERVL 1 554 0 4969 242 39 30 chr5 120725926 120728924 -82356608 - L1P5 LINE L1 -4592 2271 3 3423 123 11 11 chr5 120728955 120729537 -82355995 - L1M1 LINE L1 -541 5764 5174 421 182 0 0 chr5 120729538 120729615 -82355917 + L1MB2 LINE L1 5313 5389 -777 3342 151 72 7 chr5 120730886 120731496 -82354036 + L1MB2 LINE L1 5504 6153 -18 3175 45 0 0 chr5 120731794 120732172 -82353360 - L1PA4 LINE L1 -6 6149 5772 2229 46 0 0 chr5 120732172 120732432 -82353100 + L1PA4 LINE L1 5506 5765 -390 21 36 0 0 chr5 120732807 120732835 -82352697 + AT_rich Low_complexity Low_complexity 1 28 0 319 264 90 21 chr5 120733649 120733793 -82351739 - MLT1K LTR MaLR -310 278 125 26 0 0 0 chr5 120734286 120734312 -82351220 + AT_rich Low_complexity Low_complexity 1 26 0 311 333 29 0 chr5 120734667 120734772 -82350760 + MIR SINE MIR 104 211 -51 468 258 44 31 chr5 120734787 120734946 -82350586 - ERVL LTR ERVL -3438 2326 2166 679 247 179 38 chr5 120735617 120736014 -82349518 - LTR16A1 LTR ERVL 0 457 5 655 330 51 28 chr5 120736277 120736707 -82348825 - L2 LINE L2 -337 2977 2538 613 266 101 51 chr5 120736723 120736960 -82348572 - MER112 DNA MER1_type -11 249 1 575 298 64 16 chr5 120738135 120738323 -82347209 + MIR SINE MIR 22 218 -44 312 304 0 82 chr5 120738425 120738560 -82346972 - MIR SINE MIR -63 145 22 21 0 0 0 chr5 120738608 120738629 -82346903 + AT_rich Low_complexity Low_complexity 1 21 0 193 194 28 0 chr5 120742802 120742838 -82342694 + MIR SINE MIR 116 152 -110 311 288 169 25 chr5 120743328 120743488 -82342044 - MIR SINE MIR -60 202 20 2936 225 62 39 chr5 120743578 120744450 -82341082 - L1ME1 LINE L1 -19 6147 5257 352 306 42 14 chr5 120744452 120744596 -82340936 - L1ME LINE L1 -5920 150 3 478 265 41 55 chr5 120744641 120744860 -82340672 + L1M4c LINE L1 1413 1628 -4756 651 259 32 27 chr5 120745440 120745660 -82339872 - LTR33 LTR ERVL -9 512 292 29187 39 37 2 chr5 120746076 120749650 -82335882 + L1PA5 LINE L1 1 3698 -2448 3625 246 184 28 chr5 120749806 120750911 -82334621 + L1MA8 LINE L1 537 1468 -5638 5293 49 3 2 chr5 120750911 120751526 -82334006 + L1PA5 LINE L1 5539 6154 0 3625 246 184 28 chr5 120751526 120752902 -82332630 + L1MA8 LINE L1 1468 3140 -3966 5497 67 25 1 chr5 120753051 120753769 -82331763 - L1P LINE L1 -1470 4676 3942 4972 50 3 0 chr5 120753769 120754345 -82331187 + L1PA7 LINE L1 5570 6148 -6 5699 169 65 10 chr5 120754345 120756651 -82328881 + L1MA8 LINE L1 4336 7251 0 332 231 46 37 chr5 120756661 120756769 -82328763 + MLT2C1 LTR ERVL 60 168 -229 515 274 37 37 chr5 120756946 120757110 -82328422 - MIR SINE MIR -90 172 9 715 257 102 5 chr5 120758089 120758276 -82327256 - MIR SINE MIR -21 241 37 182 188 0 21 chr5 120758279 120758327 -82327205 + GA-rich Low_complexity Low_complexity 2 48 0 376 263 32 21 chr5 120759049 120759144 -82326388 + MIR3 SINE MIR 10 105 -103 546 271 182 44 chr5 120759957 120760182 -82325350 + MIR SINE MIR 2 257 -5 1838 230 115 31 chr5 120760794 120761273 -82324259 + LTR40a LTR ERVL 1 519 0 2085 96 27 10 chr5 120762012 120762304 -82323228 + AluSx SINE Alu 6 302 -10 279 211 18 0 chr5 120762614 120762671 -82322861 + L2 LINE L2 3181 3238 -75 185 0 40 0 chr5 120763747 120763772 -82321760 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 894 305 192 35 chr5 120764584 120765380 -82320152 + L3 LINE CR1 185 1105 -472 782 179 0 8 chr5 120765771 120765894 -82319638 - FLAM_A SINE Alu -11 122 1 30 0 0 0 chr5 120768765 120768795 -82316737 + AT_rich Low_complexity Low_complexity 1 30 0 2182 109 13 3 chr5 120769990 120770294 -82315238 + AluSx SINE Alu 1 307 -5 183 251 175 58 chr5 120770390 120770561 -82314971 + MIR SINE MIR 70 260 -2 852 248 10 10 chr5 120770889 120771096 -82314436 + L1PB4 LINE L1 5965 6298 -1 253 279 47 0 chr5 120771388 120771474 -82314058 - MIR SINE MIR -24 238 149 217 231 0 0 chr5 120771846 120771885 -82313647 - L2 LINE L2 -15 3257 3219 265 263 0 40 chr5 120771965 120772064 -82313468 + A-rich Low_complexity Low_complexity 1 95 0 537 16 0 0 chr5 120772249 120772311 -82313221 + (CCCCCT)n Simple_repeat Simple_repeat 3 64 0 5295 63 25 47 chr5 120772311 120773672 -82311860 + SVA Other Other 58 1140 -246 312 216 0 0 chr5 120773672 120773769 -82311763 + A-rich Low_complexity Low_complexity 1 97 0 2423 88 0 3 chr5 120774208 120774515 -82311017 + AluSq SINE Alu 1 306 -7 23 33 0 0 chr5 120774543 120774573 -82310959 + AT_rich Low_complexity Low_complexity 1 30 0 2121 100 3 45 chr5 120775455 120775765 -82309767 + AluSq SINE Alu 1 297 -16 1204 98 18 0 chr5 120775765 120775929 -82309603 + AluSg/x SINE Alu 137 303 -9 3014 161 26 4 chr5 120776698 120777275 -82308257 + L1MB3 LINE L1 5539 6183 0 2452 216 87 46 chr5 120777584 120778321 -82307211 + LTR41 LTR ERVL 1 767 -6 463 348 18 26 chr5 120778735 120778962 -82306570 + ERVL LTR ERVL 475 699 -5065 467 253 114 79 chr5 120779094 120779601 -82305931 + ERVL LTR ERVL 5231 5755 -9 1664 251 152 18 chr5 120779602 120780215 -82305317 + LTR41 LTR ERVL 1 695 -78 23 0 0 0 chr5 120780672 120780695 -82304837 + AT_rich Low_complexity Low_complexity 1 23 0 528 218 115 13 chr5 120780974 120781130 -82304402 - MIR SINE MIR -13 249 78 706 263 26 47 chr5 120781193 120781425 -82304107 + Charlie2 DNA MER1_type 15 241 -2621 321 117 133 0 chr5 120781459 120781519 -82304013 + Charlie2 DNA MER1_type 1871 1938 -924 925 188 229 0 chr5 120781559 120781852 -82303680 + Charlie2 DNA MER1_type 2007 2366 -496 22 0 0 0 chr5 120781857 120781879 -82303653 + AT_rich Low_complexity Low_complexity 1 22 0 367 198 156 0 chr5 120781916 120782012 -82303520 + Charlie2 DNA MER1_type 2746 2856 -6 28 79 0 0 chr5 120782257 120782320 -82303212 + AT_rich Low_complexity Low_complexity 1 63 0 238 298 21 0 chr5 120783108 120783202 -82302330 + (TA)n Simple_repeat Simple_repeat 2 97 0 418 194 53 6 chr5 120783274 120783444 -82302088 + (TA)n Simple_repeat Simple_repeat 2 179 0 282 174 50 6 chr5 120783501 120783963 -82301569 + (TA)n Simple_repeat Simple_repeat 1 482 0 386 205 47 12 chr5 120783980 120784151 -82301381 + (TA)n Simple_repeat Simple_repeat 2 178 0 420 170 76 3 chr5 120785178 120785464 -82300068 + (TA)n Simple_repeat Simple_repeat 1 306 0 31 44 0 0 chr5 120785421 120785466 -82300066 + AT_rich Low_complexity Low_complexity 1 45 0 * 1421 220 0 30 chr5 120785511 120785815 -82299717 + AluJo SINE Alu 1 295 -17 934 167 44 48 chr5 120786655 120786883 -82298649 + MER46A DNA MER2_type 1 227 -9 22 0 0 0 chr5 120787049 120787071 -82298461 + AT_rich Low_complexity Low_complexity 1 22 0 244 330 60 46 chr5 120787321 120787539 -82297993 + L2 LINE L2 2139 2359 -955 399 328 98 25 chr5 120787994 120788229 -82297303 - L3 LINE CR1 -122 1455 1204 228 222 0 22 chr5 120788297 120788342 -82297190 + L1MC4a LINE L1 7082 7125 -683 3506 90 17 36 chr5 120788364 120788885 -82296647 + MER9 LTR ERVK 1 511 0 1860 136 0 7 chr5 120788885 120789172 -82296360 + AluJb SINE Alu 27 311 -1 2876 214 50 44 chr5 120789172 120789292 -82296240 + L1MC4 LINE L1 7195 7313 -729 2421 141 25 25 chr5 120789292 120789725 -82295807 + Tigger2a DNA MER2_type 2 434 0 2876 214 50 44 chr5 120789725 120790442 -82295090 + L1MC4 LINE L1 7313 8037 -5 2220 108 0 0 chr5 120791168 120791465 -82294067 + AluSx SINE Alu 1 297 -15 381 344 132 20 chr5 120793760 120794115 -82291417 + L2 LINE L2 2826 3220 -93 1917 134 34 3 chr5 120794199 120794491 -82291041 + AluSx SINE Alu 1 301 -11 2804 3 0 0 chr5 120794671 120794971 -82290561 + AluYa5 SINE Alu 1 300 -11 766 278 56 38 chr5 120795107 120795483 -82290049 + L1MC4a LINE L1 5281 5659 -708 296 188 29 14 chr5 120795570 120795639 -82289893 - MER6 DNA MER2_type 0 865 796 308 277 59 104 chr5 120795639 120795841 -82289691 + L1MC4a LINE L1 5801 5993 -1815 884 256 138 32 chr5 120796745 120797092 -82288440 + L2 LINE L2 2928 3311 -2 2234 102 0 3 chr5 120797177 120797471 -82288061 + AluSq SINE Alu 1 293 -20 265 60 0 40 chr5 120797471 120797521 -82288011 + (TA)n Simple_repeat Simple_repeat 2 49 0 409 263 102 43 chr5 120797785 120798250 -82287282 + L1P LINE L1 3475 3976 -2170 683 238 48 0 chr5 120798251 120798398 -82287134 + MER58B DNA MER1_type 187 340 -1 2536 142 31 2 chr5 120799144 120799560 -82285972 + MSTA LTR MaLR 1 428 0 2250 105 3 3 chr5 120800076 120800382 -82285150 + AluSp SINE Alu 1 306 -7 378 215 11 54 chr5 120801328 120801421 -82284111 + MER58 DNA MER1_type 4 92 -249 * 444 165 13 0 chr5 120801419 120801498 -82284034 + MER58 DNA MER1_type 2339 2418 -2 574 303 136 23 chr5 120802131 120802352 -82283180 + MIR SINE MIR 9 254 -8 183 329 0 0 chr5 120802859 120802941 -82282591 - L2 LINE L2 -1345 1969 1888 2340 103 3 0 chr5 120802950 120803261 -82282271 + AluSp SINE Alu 1 312 -1 1209 116 12 0 chr5 120803266 120803430 -82282102 + AluSg/x SINE Alu 127 292 -18 189 359 123 19 chr5 120804822 120804928 -82280604 + L2 LINE L2 3137 3253 -19 1992 139 7 0 chr5 120805554 120805865 -82279667 + AluSx SINE Alu 1 313 0 201 196 0 20 chr5 120806630 120806681 -82278851 + A-rich Low_complexity Low_complexity 1 50 0 349 227 182 39 chr5 120807069 120807223 -82278309 - MER46C DNA MER2_type -8 330 155 27 29 0 0 chr5 120807444 120807478 -82278054 + AT_rich Low_complexity Low_complexity 1 34 0 655 224 71 33 chr5 120807858 120808041 -82277491 + MIR SINE MIR 1 190 -72 1232 48 0 0 chr5 120810410 120810557 -82274975 - AluYa5 SINE Alu -2 309 163 2022 133 13 3 chr5 120810852 120811153 -82274379 + AluSx SINE Alu 1 304 -8 1972 150 3 19 chr5 120811154 120811467 -82274065 + AluSx SINE Alu 2 309 -3 21 0 0 0 chr5 120812384 120812405 -82273127 + AT_rich Low_complexity Low_complexity 1 21 0 2200 128 0 0 chr5 120812893 120813190 -82272342 + AluSx SINE Alu 2 298 -14 202 312 64 37 chr5 120813323 120813432 -82272100 - MIR SINE MIR -60 202 91 1172 278 136 28 chr5 120813488 120813971 -82271561 + Charlie7 DNA MER1_type 6 568 -2044 1644 156 19 42 chr5 120813971 120814278 -82271254 + AluJb SINE Alu 7 306 -6 1172 278 136 28 chr5 120814278 120814395 -82271137 + Charlie7 DNA MER1_type 568 671 -1941 2182 103 3 0 chr5 120815150 120815441 -82270091 - AluSg SINE Alu -18 292 1 1915 291 108 5 chr5 120815451 120816069 -82269463 - L2 LINE L2 -540 2774 2093 1420 163 101 3 chr5 120816072 120816360 -82269172 - MER46B DNA MER2_type -1 235 45 480 137 14 0 chr5 120816360 120816433 -82269099 + AluS SINE Alu 1 74 -239 344 172 0 31 chr5 120816456 120816520 -82269012 - MER46B DNA MER2_type -298 63 2 474 266 207 0 chr5 120816522 120816759 -82268773 - L2 LINE L2 -1227 2087 1802 246 284 227 28 chr5 120816820 120817317 -82268215 - HAL1 LINE L1 -592 1915 1320 353 244 70 101 chr5 120817395 120817653 -82267879 - HAL1 LINE L1 -1341 1166 917 1556 229 50 13 chr5 120818382 120818779 -82266753 + MLT1F1 LTR MaLR 97 508 -59 3694 264 72 21 chr5 120819397 120821117 -82264415 - L1MEc LINE L1 -2412 3803 2032 483 184 61 10 chr5 120821320 120821418 -82264114 - Tigger5 DNA MER2_type 0 2323 2221 430 292 75 46 chr5 120821652 120821892 -82263640 - L1MEc LINE L1 -4634 1762 1516 762 279 84 28 chr5 120821940 120822595 -82262937 + L1ME4a LINE L1 4129 4820 -1326 2185 114 0 0 chr5 120822608 120822906 -82262626 + AluSx SINE Alu 3 300 -12 249 125 71 36 chr5 120822961 120823017 -82262515 + MER3 DNA MER1_type 152 209 0 226 186 85 17 chr5 120822965 120823024 -82262508 - MER3 DNA MER1_type -106 103 41 * 447 297 90 42 chr5 120823026 120823830 -82261702 + L1ME4a LINE L1 4822 5662 -504 667 213 7 13 chr5 120823837 120823987 -82261545 + FRAM SINE Alu 22 170 -6 927 208 54 70 chr5 120823987 120824300 -82261232 + L1ME4a LINE L1 5696 6003 -167 2320 114 0 0 chr5 120824367 120824675 -82260857 - AluSx SINE Alu -4 308 1 271 241 120 23 chr5 120824786 120824919 -82260613 + L1ME4a LINE L1 5973 6118 -3 536 322 64 26 chr5 120825257 120825524 -82260008 + L1MEd LINE L1 446 722 -5397 1654 161 18 0 chr5 120825577 120825850 -82259682 + AluJb SINE Alu 1 278 -34 2241 100 0 3 chr5 120826057 120826356 -82259176 + AluSq SINE Alu 14 311 -2 337 253 94 72 chr5 120826540 120826747 -82258785 + L1M4 LINE L1 3901 4117 -2029 2384 92 3 0 chr5 120826747 120827051 -82258481 - AluSg SINE Alu -5 305 1 337 253 94 72 chr5 120827051 120827108 -82258424 + L1M4 LINE L1 4117 4171 -1975 198 0 0 0 chr5 120827108 120827130 -82258402 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 1265 216 52 44 chr5 120827264 120827626 -82257906 + MLT1A1 LTR MaLR 1 365 0 2067 133 0 16 chr5 120827843 120828151 -82257381 - AluSx SINE Alu -9 303 1 6722 39 41 10 chr5 120828223 120829119 -82256413 + L1PA5 LINE L1 5232 6154 0 1836 246 92 77 chr5 120829120 120829258 -82256274 + L1ME2 LINE L1 670 804 -5826 2172 107 7 0 chr5 120829258 120829557 -82255975 + AluSq SINE Alu 1 301 -12 1836 246 92 77 chr5 120829557 120830360 -82255172 + L1ME2 LINE L1 804 1631 -4999 2003 133 10 7 chr5 120830360 120830660 -82254872 + AluSx SINE Alu 1 301 -11 1836 246 92 77 chr5 120830660 120830771 -82254761 + L1ME2 LINE L1 1631 1739 -4891 2223 93 0 13 chr5 120831050 120831352 -82254180 + AluY SINE Alu 1 298 -13 1857 127 30 0 chr5 120831374 120831641 -82253891 + AluSx SINE Alu 13 287 -25 730 256 6 0 chr5 120831667 120831831 -82253701 + FRAM SINE Alu 2 166 0 383 303 81 0 chr5 120831892 120832113 -82253419 + L1ME2 LINE L1 2226 2464 -4658 351 219 41 65 chr5 120832113 120832236 -82253296 + MER3 DNA MER1_type 90 209 0 6518 218 139 51 chr5 120832238 120834142 -82251390 + L1ME2 LINE L1 2595 4330 -2629 2046 111 4 7 chr5 120834142 120834458 -82251074 + AluSg SINE Alu 2 316 0 6518 218 139 51 chr5 120834458 120834513 -82251019 + L1ME2 LINE L1 4330 4379 -2580 1784 159 41 41 chr5 120834513 120834590 -82250942 - MLT1A1 LTR MaLR 0 365 289 2164 112 23 0 chr5 120834590 120834895 -82250637 + AluSx SINE Alu 1 312 0 1784 159 41 41 chr5 120834895 120835182 -82250350 - MLT1A1 LTR MaLR -75 290 1 6518 218 139 51 chr5 120835182 120836392 -82249140 + L1ME2 LINE L1 4379 5481 -1478 2440 60 10 0 chr5 120836392 120836691 -82248841 - AluY SINE Alu -9 302 1 6518 218 139 51 chr5 120836691 120837568 -82247964 + L1ME2 LINE L1 5481 6950 -9 393 275 44 96 chr5 120837730 120837981 -82247551 + L1MC/D LINE L1 3964 4201 -1945 281 276 47 16 chr5 120838195 120838322 -82247210 + L1MC/D LINE L1 4487 4617 -1529 249 224 40 13 chr5 120838411 120838487 -82247045 + L1MC/D LINE L1 5588 5665 -456 240 266 49 66 chr5 120838653 120838879 -82246653 + L1MC/D LINE L1 5689 5910 -1898 305 129 0 16 chr5 120840293 120840355 -82245177 + (CGG)n Simple_repeat Simple_repeat 3 63 0 1080 271 56 7 chr5 120841858 120842271 -82243261 + MER113 DNA MER1_type? 89 521 0 481 289 83 33 chr5 120842271 120842513 -82243019 + MIR SINE MIR 9 262 0 754 176 39 122 chr5 120842628 120842708 -82242824 + MER5A DNA MER1_type 1 86 -103 2069 125 23 3 chr5 120842708 120843012 -82242520 + AluSx SINE Alu 1 310 -2 754 176 39 122 chr5 120843012 120843136 -82242396 + MER5A DNA MER1_type 86 188 -1 1879 214 66 23 chr5 120843200 120843729 -82241803 + L1M4 LINE L1 2 553 -5989 1559 183 167 56 chr5 120843730 120844192 -82241340 - MER66A LTR ERV1 0 490 100 2029 179 28 77 chr5 120844274 120844325 -82241207 + L1M4 LINE L1 547 599 -5943 2069 146 76 15 chr5 120844325 120844668 -82240864 + THE1B LTR MaLR 1 364 0 11340 91 31 1 chr5 120844668 120846202 -82239330 + THE1B-int LTR MaLR 1 1580 0 2042 146 76 15 chr5 120846202 120846544 -82238988 + THE1B LTR MaLR 1 363 -1 2029 179 28 77 chr5 120846544 120847033 -82238499 + L1M4 LINE L1 596 1062 -5480 662 266 14 22 chr5 120847024 120847299 -82238233 + L1M4 LINE L1 3683 3955 -2689 * 326 311 0 19 chr5 120847313 120847416 -82238116 + MIR SINE MIR 82 182 -80 303 248 184 18 chr5 120847541 120847650 -82237882 - MLT1J1 LTR MaLR -126 320 194 243 301 41 34 chr5 120848024 120848170 -82237362 - L1MEc LINE L1 -5951 445 299 449 335 22 6 chr5 120848260 120848442 -82237090 - L1MEc LINE L1 -5855 350 166 323 228 162 94 chr5 120849659 120850008 -82235524 - HAL1 LINE L1 -1033 1474 1093 2186 133 3 3 chr5 120850008 120850317 -82235215 - AluSx SINE Alu -3 309 1 323 228 162 94 chr5 120850317 120850362 -82235170 - HAL1 LINE L1 -1414 1093 1053 360 103 0 0 chr5 120850435 120850493 -82235039 - Alu SINE Alu -2 300 243 363 321 95 6 chr5 120850597 120850765 -82234767 - HAL1 LINE L1 -1610 897 715 216 0 0 0 chr5 120850841 120850865 -82234667 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2292 85 0 0 chr5 120850867 120851148 -82234384 - AluSx SINE Alu -31 281 1 986 165 44 76 chr5 120851259 120851575 -82233957 + MER33 DNA MER1_type 9 314 -10 21 36 0 0 chr5 120851868 120851896 -82233636 + AT_rich Low_complexity Low_complexity 1 28 0 625 245 137 106 chr5 120852153 120852672 -82232860 - LTR67 LTR ERVL -20 537 3 2263 97 0 0 chr5 120852760 120853058 -82232474 + AluSc SINE Alu 1 298 -11 687 25 0 0 chr5 120853058 120853139 -82232393 + (TA)n Simple_repeat Simple_repeat 2 82 0 198 317 188 38 chr5 120853223 120853409 -82232123 - L3 LINE CR1 -19 1558 1345 1230 101 0 0 chr5 120853423 120853581 -82231951 - AluSq SINE Alu -22 291 134 2104 107 14 0 chr5 120853672 120853963 -82231569 + AluSx SINE Alu 1 295 -17 438 263 181 6 chr5 120853977 120854148 -82231384 + MIR SINE MIR 61 261 -1 3147 107 23 35 chr5 120854181 120854335 -82231197 + MER84 LTR ERVI 1 155 -352 2445 61 0 16 chr5 120854335 120854647 -82230885 - AluY SINE Alu -4 307 1 3147 107 23 35 chr5 120854647 120854898 -82230634 + MER84 LTR ERVI 155 401 -106 4802 116 0 17 chr5 120854898 120855599 -82229933 + LTR8 LTR ERV1 1 689 -2 3147 107 23 35 chr5 120855599 120855705 -82229827 + MER84 LTR ERVI 401 507 0 3820 107 2 11 chr5 120855705 120856048 -82229484 + LTR8-int LTR ERV1 1 346 -4608 495 0 0 0 chr5 120856048 120856103 -82229429 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2108 99 7 11 chr5 120856106 120856390 -82229142 - AluSq SINE Alu -30 283 1 3820 107 2 11 chr5 120856390 120857223 -82228309 + LTR8-int LTR ERV1 348 1343 -3611 182 350 17 0 chr5 120857288 120857348 -82228184 + L2 LINE L2 3146 3206 -66 219 167 0 0 chr5 120857377 120857419 -82228113 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr5 120857570 120857591 -82227941 + AT_rich Low_complexity Low_complexity 1 21 0 1998 157 3 0 chr5 120857638 120857932 -82227600 + AluJo SINE Alu 1 295 -17 3214 67 14 11 chr5 120858816 120859252 -82226280 - L1PA10 LINE L1 -4 6164 5728 1701 170 75 109 chr5 120860152 120860268 -82225264 + MLT1D LTR MaLR 1 119 -386 2161 111 3 3 chr5 120860268 120860574 -82224958 + AluSq SINE Alu 2 307 -6 1701 170 75 109 chr5 120860574 120860791 -82224741 + MLT1D LTR MaLR 119 312 -193 1934 157 6 10 chr5 120860791 120861103 -82224429 + AluJo SINE Alu 2 312 0 1701 170 75 109 chr5 120861103 120861291 -82224241 + MLT1D LTR MaLR 312 505 0 27 29 0 0 chr5 120861360 120861394 -82224138 + AT_rich Low_complexity Low_complexity 1 34 0 43 85 0 0 chr5 120861609 120861715 -82223817 + AT_rich Low_complexity Low_complexity 1 106 0 591 288 67 25 chr5 120861848 120862226 -82223306 - MLT1J LTR MaLR -29 482 36 3587 248 64 28 chr5 120862227 120863460 -82222072 + L1M4 LINE L1 2545 3732 -2414 2067 104 11 0 chr5 120863460 120863763 -82221769 + AluSx SINE Alu 1 306 0 2285 107 0 0 chr5 120863772 120864071 -82221461 - AluSx SINE Alu -13 299 1 3587 248 64 28 chr5 120864071 120864151 -82221381 + L1M4 LINE L1 3739 3917 -2229 5291 269 47 34 chr5 120864272 120864726 -82220806 + L1MEc LINE L1 1897 2344 -3871 2067 112 21 0 chr5 120864726 120865012 -82220520 + AluSq SINE Alu 1 292 -21 5291 269 47 34 chr5 120865012 120865593 -82219939 + L1MEc LINE L1 2344 2916 -3299 2051 117 7 0 chr5 120865593 120865902 -82219630 + AluSx SINE Alu 1 311 0 5291 269 47 34 chr5 120865902 120867693 -82217839 + L1MEc LINE L1 2916 4726 -1489 3524 141 103 140 chr5 120867955 120868419 -82217113 + L1MC3 LINE L1 6674 7154 -631 238 340 0 0 chr5 120868419 120868516 -82217016 + MLT1K LTR MaLR 37 133 -434 3524 141 103 140 chr5 120868516 120869088 -82216444 + L1MC3 LINE L1 7154 7764 -21 27 29 0 0 chr5 120869098 120869132 -82216400 + AT_rich Low_complexity Low_complexity 1 34 0 551 155 12 8 chr5 120869138 120869274 -82216258 + L1M2 LINE L1 5295 5433 -858 787 139 86 20 chr5 120869388 120869539 -82215993 + FRAM SINE Alu 1 161 -5 479 133 0 0 chr5 120869652 120869735 -82215797 - L1MC3 LINE L1 -114 7671 7589 25 65 0 0 chr5 120871322 120871368 -82214164 + AT_rich Low_complexity Low_complexity 1 46 0 2563 50 0 3 chr5 120871477 120871778 -82213754 - AluY SINE Alu -11 300 1 40581 37 22 1 chr5 120871967 120877989 -82207543 - L1PA3 LINE L1 0 6155 2 334 118 0 0 chr5 120878462 120878513 -82207019 - MADE1 DNA Mariner -29 51 1 1942 116 3 51 chr5 120879028 120879339 -82206193 - AluSx SINE Alu -16 296 1 343 213 12 106 chr5 120879476 120879636 -82205896 + L1M4 LINE L1 2686 2830 -3316 1694 176 0 7 chr5 120879636 120879914 -82205618 - AluJb SINE Alu -13 299 24 1366 170 23 23 chr5 120879927 120880186 -82205346 - AluJb SINE Alu -53 259 1 289 278 86 104 chr5 120881363 120881920 -82203612 + LTR67 LTR ERVL 5 551 -6 276 299 108 25 chr5 120881925 120882082 -82203450 + MLT1K LTR MaLR 305 474 -114 189 195 0 0 chr5 120882199 120882240 -82203292 + (TA)n Simple_repeat Simple_repeat 1 41 0 1983 147 0 0 chr5 120882248 120882533 -82202999 - AluSx SINE Alu -17 295 11 313 289 16 16 chr5 120883015 120883136 -82202396 - MIR SINE MIR -34 228 108 314 106 0 0 chr5 120883234 120883281 -82202251 + Alu SINE Alu 1 47 -253 488 189 11 21 chr5 120886538 120886633 -82198899 + FLAM_C SINE Alu 14 107 -36 27 49 0 0 chr5 120886642 120886683 -82198849 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr5 120886738 120886763 -82198769 + AT_rich Low_complexity Low_complexity 1 25 0 213 132 26 0 chr5 120887011 120887049 -82198483 + T-rich Low_complexity Low_complexity 4 42 0 41566 43 3 1 chr5 120887602 120893725 -82191807 + L1PA4 LINE L1 1 6139 -16 207 0 0 0 chr5 120893782 120893805 -82191727 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 297 265 86 17 chr5 120894341 120894495 -82191037 - MLT1J2 LTR MaLR -8 427 279 354 284 19 37 chr5 120894531 120894693 -82190839 - MLT1J2 LTR MaLR -291 159 1 2119 104 0 17 chr5 120945886 120946204 -82139328 + AluSp SINE Alu 2 314 0 763 229 106 27 chr5 120946252 120946553 -82138979 - L1ME LINE L1 -301 5820 5496 216 290 16 0 chr5 120947124 120947186 -82138346 + L2 LINE L2 2797 2859 -455 * 717 319 73 19 chr5 120947179 120947493 -82138039 + L2 LINE L2 2968 3298 -15 845 322 65 50 chr5 120947658 120948372 -82137160 + L2 LINE L2 2511 3236 -36 424 335 50 16 chr5 120948788 120948970 -82136562 - MER91B DNA MER1_type 0 190 3 1722 185 45 51 chr5 120949969 120950439 -82135093 - MLT1C LTR MaLR 0 467 1 443 211 11 33 chr5 120950625 120950715 -82134817 + MER5A DNA MER1_type 16 103 -86 4937 124 38 12 chr5 120950768 120951617 -82133915 - L1MA5 LINE L1 -1 6299 5429 2599 158 6 2 chr5 120952502 120952976 -82132556 - L1MA8 LINE L1 -23 6268 5793 2721 150 14 2 chr5 120954266 120954760 -82130772 - L1MA8 LINE L1 -23 6268 5769 2917 111 88 27 chr5 120954774 120955270 -82130262 - L1MA5A LINE L1 -6 6291 5756 200 35 35 0 chr5 120955270 120955299 -82130233 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 2917 111 88 27 chr5 120955299 120955362 -82130170 - L1MA5A LINE L1 -541 5756 5698 2103 58 14 3 chr5 120955502 120955794 -82129738 - L1PA8 LINE L1 -177 5995 5701 * 3546 165 29 18 chr5 120955793 120956552 -82128980 - L1MA5 LINE L1 -816 5330 4564 683 54 43 0 chr5 120956558 120956651 -82128881 - L1M2 LINE L1 -516 5775 5679 * 1330 161 20 0 chr5 120956626 120956874 -82128658 + L1M2 LINE L1 5406 5658 -654 272 298 21 71 chr5 120957427 120957568 -82127964 + MIR3 SINE MIR 5 138 -70 344 231 167 45 chr5 120958604 120958760 -82126772 + MIR SINE MIR 85 259 -3 234 265 84 36 chr5 120959473 120959556 -82125976 + L2 LINE L2 3227 3313 0 193 247 39 39 chr5 120960486 120960563 -82124969 - MIR SINE MIR -51 211 135 401 211 77 83 chr5 120960568 120960712 -82124820 - MIR SINE MIR -102 160 16 2130 97 23 10 chr5 120960712 120961012 -82124520 - AluSq SINE Alu -9 304 1 401 211 77 83 chr5 120961012 120961023 -82124509 - MIR SINE MIR -246 16 6 2149 73 0 0 chr5 120961045 120961317 -82124215 + AluY SINE Alu 1 272 -39 447 87 0 0 chr5 120961320 120961389 -82124143 + Alu SINE Alu 237 305 -7 456 272 41 0 chr5 120961799 120961946 -82123586 - MLT1L LTR MaLR -54 561 409 367 260 83 0 chr5 120962013 120962109 -82123423 - MLT1L LTR MaLR -364 251 148 416 291 117 43 chr5 120962627 120962977 -82122555 - MLT1J LTR MaLR -17 494 119 211 268 18 0 chr5 120964073 120964129 -82121403 + L2 LINE L2 3210 3266 -6 453 283 111 45 chr5 120964737 120964981 -82120551 + MIR SINE MIR 3 262 0 385 287 125 0 chr5 120965027 120965163 -82120369 + MIR3 SINE MIR 15 167 -41 626 346 172 33 chr5 120965433 120966413 -82119119 + L2 LINE L2 82 1198 -2116 307 71 0 0 chr5 120966444 120966486 -82119046 - MLT1I LTR MaLR -2 407 366 372 189 150 31 chr5 120966525 120966652 -82118880 - MLT1J1 LTR MaLR -34 412 271 398 252 29 36 chr5 120966692 120966831 -82118701 - MLT1I LTR MaLR -271 138 1 195 210 12 123 chr5 120967068 120967149 -82118383 + MIR SINE MIR 121 192 -70 14113 130 19 16 chr5 120967155 120969091 -82116441 - Tigger1 DNA MER2_type 0 2418 488 633 25 0 0 chr5 120969091 120969171 -82116361 + L1PA3 LINE L1 6073 6152 -3 180 0 0 0 chr5 120969174 120969194 -82116338 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 14113 130 19 16 chr5 120969194 120969665 -82115867 - Tigger1 DNA MER2_type -1931 487 1 39 38 0 0 chr5 120969695 120969748 -82115784 + AT_rich Low_complexity Low_complexity 1 53 0 380 255 104 0 chr5 120969803 120969909 -82115623 + L2 LINE L2 3192 3308 -5 617 229 0 0 chr5 120969909 120970031 -82115501 - FLAM_A SINE Alu -11 122 1 212 0 36 0 chr5 120971060 120971088 -82114444 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 304 292 73 0 chr5 120971492 120971588 -82113944 - L2 LINE L2 -12 3260 3158 662 250 83 48 chr5 120971600 120972075 -82113457 + Charlie8 DNA MER1_type 1 488 -1929 477 279 79 68 chr5 120972534 120972799 -82112733 - ERVL LTR ERVL -1978 3786 3519 2414 150 2 9 chr5 120972817 120973236 -82112296 - Tigger2 DNA MER2_type 0 2718 2303 330 194 0 0 chr5 120973260 120973322 -82112210 + MER8 DNA MER2_type 178 239 0 715 330 39 4 chr5 120973323 120973602 -82111930 - ERVL LTR ERVL -2263 3501 3213 * 2817 297 76 19 chr5 120973596 120974882 -82110650 - ERVL LTR ERVL -3144 2620 1262 446 345 70 17 chr5 120974918 120975277 -82110255 - ERVL LTR ERVL -4563 1201 824 345 322 62 0 chr5 120975331 120975477 -82110055 - ERVL LTR ERVL -5105 659 505 4332 212 23 26 chr5 120976775 120977852 -82107680 + Charlie1a DNA MER1_type 1 1074 -381 426 85 0 0 chr5 120977853 120977912 -82107620 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1561 202 122 37 chr5 120977916 120978406 -82107126 + MER34 LTR ERV1 11 542 0 240 86 0 0 chr5 120978423 120978458 -82107074 + (TA)n Simple_repeat Simple_repeat 1 35 0 641 137 8 34 chr5 120978481 120978598 -82106934 - L1MC1 LINE L1 -9 6324 6211 2579 138 24 11 chr5 120978599 120979054 -82106478 + L1MC1 LINE L1 5579 6039 -294 936 105 0 33 chr5 120980446 120980598 -82104934 + L1MC1 LINE L1 6054 6200 -133 668 263 22 108 chr5 120982235 120982604 -82102928 - REP3 LTR ERV -221 341 5 1923 162 23 0 chr5 120983167 120983470 -82102062 - AluSx SINE Alu -2 310 1 236 214 18 18 chr5 120984808 120984864 -82100668 - L3b LINE CR1 -127 1456 1401 320 287 74 8 chr5 120987280 120987402 -82098130 - MIR SINE MIR -13 249 120 208 140 53 0 chr5 120987407 120987464 -82098068 + (TTATA)n Simple_repeat Simple_repeat 2 61 0 341 247 59 0 chr5 120987898 120987983 -82097549 - L2 LINE L2 0 3313 3224 181 303 101 9 chr5 120988288 120988397 -82097135 + L2 LINE L2 3138 3256 -16 340 338 185 0 chr5 120988497 120988648 -82096884 + MER5A DNA MER1_type 11 189 0 1846 144 0 0 chr5 120990935 120991214 -82094318 + AluSx SINE Alu 30 308 0 25 0 0 0 chr5 120991914 120991939 -82093593 + AT_rich Low_complexity Low_complexity 1 25 0 354 260 0 22 chr5 120993139 120993229 -82092303 - MIR3 SINE MIR -18 190 100 445 292 90 64 chr5 120993278 120993354 -82092178 - L1MC4a LINE L1 -323 5798 5725 5304 34 2 6 chr5 120993354 120993995 -82091537 + L1PA4 LINE L1 5518 6155 0 445 292 90 64 chr5 120993995 120994560 -82090972 - L1MC4a LINE L1 -396 5725 5264 250 304 29 0 chr5 120994560 120994629 -82090903 - L2 LINE L2 -12 3301 3231 369 287 98 8 chr5 120994695 120994817 -82090715 - MIR SINE MIR -84 178 46 360 64 0 0 chr5 120995221 120995268 -82090264 + (CA)n Simple_repeat Simple_repeat 2 48 0 2386 71 0 0 chr5 120995280 120995574 -82089958 - AluY SINE Alu -17 294 1 1744 162 19 23 chr5 120995745 120996054 -82089478 + AluJo SINE Alu 1 308 -4 4634 256 77 22 chr5 120996562 120996848 -82088684 + L1MEc LINE L1 23 292 -6104 1938 88 95 4 chr5 120996848 120997121 -82088411 + AluSx SINE Alu 1 298 -14 4634 256 77 22 chr5 120997121 120998581 -82086951 + L1MEc LINE L1 292 1866 -4530 1195 120 157 0 chr5 120998682 120998899 -82086633 + AluSx SINE Alu 46 296 -16 3816 253 89 18 chr5 120998916 121000448 -82085084 + L1MEc LINE L1 328 1967 -4429 1406 154 53 131 chr5 121000451 121000808 -82084724 + MLT1A2 LTR MaLR 5 330 -44 2128 117 24 0 chr5 121000808 121001099 -82084433 - AluSx SINE Alu -14 298 1 1406 154 53 131 chr5 121001099 121001138 -82084394 + MLT1A2 LTR MaLR 330 370 -4 4622 241 79 32 chr5 121001147 121003223 -82082309 + L1MEc LINE L1 2107 4231 -1984 445 225 33 60 chr5 121003200 121003334 -82082198 + L1ME2 LINE L1 5934 6068 -167 * 507 17 0 0 chr5 121003334 121003394 -82082138 + (GGAA)n Simple_repeat Simple_repeat 4 63 0 445 225 33 60 chr5 121003394 121003471 -82082061 + L1ME2 LINE L1 6068 6146 -89 578 180 117 68 chr5 121003480 121003686 -82081846 - MER2 DNA MER2_type 0 345 130 1066 239 8 13 chr5 121003687 121003925 -82081607 - MER8 DNA MER2_type -2 237 1 345 171 24 0 chr5 121003925 121004007 -82081525 + L1MA10 LINE L1 6249 6332 -2 805 257 33 37 chr5 121004808 121005053 -82080479 - MIR SINE MIR -12 250 7 287 198 10 59 chr5 121005488 121005589 -82079943 + L1ME4a LINE L1 5970 6065 -56 201 434 8 0 chr5 121005761 121005883 -82079649 + L3 LINE CR1 1409 1531 -46 378 260 10 19 chr5 121005885 121005989 -82079543 + MER5A DNA MER1_type 1 103 -86 480 290 129 5 chr5 121006739 121006932 -82078600 - MIR SINE MIR -18 244 28 511 322 0 0 chr5 121007266 121007384 -82078148 + L2 LINE L2 3137 3254 -18 1025 272 92 42 chr5 121009730 121010109 -82075423 - L2 LINE L2 0 3313 2916 192 370 67 39 chr5 121010166 121010374 -82075158 + L2 LINE L2 2840 3053 -219 390 270 83 93 chr5 121011159 121011448 -82074084 + L2 LINE L2 2987 3272 0 319 295 45 45 chr5 121011721 121011877 -82073655 + MLT1K LTR MaLR 87 242 -346 501 250 57 21 chr5 121011920 121012060 -82073472 + MIR SINE MIR 8 152 -110 571 286 42 27 chr5 121012172 121012431 -82073101 + MLT1K LTR MaLR 321 583 -5 455 379 10 34 chr5 121012537 121012743 -82072789 - MIR SINE MIR -54 208 8 2153 125 10 3 chr5 121014012 121014316 -82071216 - AluSq SINE Alu -5 308 3 12091 40 3 2 chr5 121014394 121019757 -82065775 - L1PA3 LINE L1 -2 6153 617 773 51 0 0 chr5 121019751 121019849 -82065683 - L1PA3 LINE L1 -6048 98 1 * 3655 196 37 97 chr5 121021109 121022570 -82062962 + L1P LINE L1 1442 2815 -3331 1812 71 0 0 chr5 121024815 121025053 -82060479 - L1PA6 LINE L1 -1 6153 5916 538 111 97 111 chr5 121025737 121025881 -82059651 + L1MC1 LINE L1 5960 6101 -232 1078 252 159 15 chr5 121025921 121026461 -82059071 - L1MC4a LINE L1 -1936 5872 5255 5301 41 0 0 chr5 121026951 121027580 -82057952 - L1PA7 LINE L1 -5 6149 5521 1118 209 31 4 chr5 121028096 121028321 -82057211 + L1PA14 LINE L1 1 231 -7350 17271 193 32 6 chr5 121028446 121028675 -82056857 + L1PA14 LINE L1 2471 2693 -4906 2068 140 0 16 chr5 121028675 121028990 -82056542 + AluSx SINE Alu 1 310 -2 17271 193 32 6 chr5 121028990 121033778 -82051754 + L1PA14 LINE L1 2693 7590 -9 29 0 0 0 chr5 121033926 121033955 -82051577 + AT_rich Low_complexity Low_complexity 1 29 0 1889 132 32 49 chr5 121034197 121034567 -82050965 + THE1B LTR MaLR 1 364 0 11471 94 15 0 chr5 121034567 121036123 -82049409 + THE1B-int LTR MaLR 1 1580 0 2048 137 13 35 chr5 121036123 121036495 -82049037 + THE1B LTR MaLR 1 364 0 445 316 73 19 chr5 121039551 121039757 -82045775 + MIR SINE MIR 46 262 0 189 0 0 0 chr5 121039922 121039943 -82045589 + (T)n Simple_repeat Simple_repeat 1 21 0 250 200 12 62 chr5 121040705 121040785 -82044747 + MER103 DNA DNA 31 106 -60 292 254 85 42 chr5 121040886 121041004 -82044528 + L2 LINE L2 3191 3313 0 245 236 0 0 chr5 121041838 121041902 -82043630 + L1ME3 LINE L1 5493 5556 -565 746 223 30 0 chr5 121041920 121042086 -82043446 - MIR SINE MIR -24 238 68 364 306 74 8 chr5 121042139 121042460 -82043072 + L1ME3 LINE L1 5632 5935 -227 2262 116 0 3 chr5 121042599 121042909 -82042623 + AluSg SINE Alu 1 309 -1 387 330 79 28 chr5 121043975 121044190 -82041342 - MIR SINE MIR -17 245 20 209 260 0 40 chr5 121044991 121045041 -82040491 - L2 LINE L2 -15 3298 3251 23 68 0 0 chr5 121045982 121046026 -82039506 + AT_rich Low_complexity Low_complexity 1 44 0 289 119 0 0 chr5 121047119 121047161 -82038371 - MER63 DNA MER1_type -35 1025 984 306 145 32 16 chr5 121047163 121047225 -82038307 - MER63 DNA MER1_type -305 757 695 225 191 43 0 chr5 121047363 121047410 -82038122 + L2 LINE L2 3265 3313 0 381 304 79 37 chr5 121047683 121047897 -82037635 + MIR SINE MIR 40 262 0 190 340 64 11 chr5 121047958 121048052 -82037480 + MIR SINE MIR 77 175 -87 663 217 63 50 chr5 121048223 121048363 -82037169 + MIR SINE MIR 12 158 -104 411 200 222 0 chr5 121048363 121048453 -82037079 + MER81 DNA DNA 5 114 0 663 217 63 50 chr5 121048453 121048533 -82036999 + MIR SINE MIR 158 235 -27 508 283 70 21 chr5 121049047 121049234 -82036298 + MIR SINE MIR 32 227 -35 371 241 0 24 chr5 121050478 121050561 -82034971 + MER5B DNA MER1_type 78 158 -20 255 228 43 54 chr5 121051599 121051691 -82033841 + MIR SINE MIR 125 215 -47 292 291 20 106 chr5 121051766 121051917 -82033615 + L2 LINE L2 3176 3313 0 190 233 47 0 chr5 121053584 121053627 -82031905 + L2 LINE L2 3038 3082 -231 32 43 0 0 chr5 121054804 121054850 -82030682 + AT_rich Low_complexity Low_complexity 1 46 0 2334 69 31 0 chr5 121054856 121055144 -82030388 + AluY SINE Alu 1 297 -14 280 176 0 81 chr5 121055175 121055249 -82030283 + L1MC5 LINE L1 7717 7784 -177 * 1301 169 25 1 chr5 121055233 121055506 -82030026 + L1MA8 LINE L1 5752 5929 -239 355 169 81 88 chr5 121055521 121055657 -82029875 + L1MC5 LINE L1 7801 7935 -26 2700 260 88 66 chr5 121056307 121058095 -82027437 - L1MC4 LINE L1 -124 7918 6007 325 325 7 66 chr5 121059302 121059474 -82026058 - L1ME4a LINE L1 -20 6101 5949 1715 192 0 14 chr5 121059474 121059771 -82025761 - AluJo SINE Alu -19 293 1 325 325 7 66 chr5 121059771 121059872 -82025660 - L1ME4a LINE L1 -172 5949 5844 595 286 34 6 chr5 121061586 121061764 -82023768 - MIR SINE MIR 0 262 80 195 342 89 13 chr5 121062605 121062684 -82022848 + L2 LINE L2 3157 3241 -31 388 262 28 0 chr5 121063588 121063695 -82021837 + MIR3 SINE MIR 87 196 -12 310 222 347 28 chr5 121063718 121063862 -82021670 + MIR3 SINE MIR 16 205 -3 709 304 44 0 chr5 121064709 121064982 -82020550 - MLT1K LTR MaLR -114 474 190 457 296 52 128 chr5 121066390 121066796 -82018736 + L2 LINE L2 2881 3255 -17 370 202 30 20 chr5 121066894 121066993 -82018539 + MER3 DNA MER1_type 23 122 -87 180 0 0 0 chr5 121067000 121067020 -82018512 + (TTTAA)n Simple_repeat Simple_repeat 5 24 0 485 241 173 5 chr5 121067261 121067397 -82018135 + MIR SINE MIR 34 212 -50 315 49 0 0 chr5 121067397 121067438 -82018094 + (TG)n Simple_repeat Simple_repeat 1 41 0 485 241 173 5 chr5 121067438 121067492 -82018040 + MIR SINE MIR 212 256 -6 268 296 90 37 chr5 121069140 121069329 -82016203 - MIR3 SINE MIR -9 199 1 353 230 27 0 chr5 121069330 121069404 -82016128 + L2 LINE L2 3197 3272 0 222 282 0 70 chr5 121070485 121070556 -82014976 + L2 LINE L2 3239 3304 -9 2018 152 3 3 chr5 121071847 121072150 -82013382 - AluJb SINE Alu -9 303 1 201 94 0 0 chr5 121072801 121072833 -82012699 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 532 274 115 9 chr5 121073616 121073843 -82011689 + MIR SINE MIR 9 255 -7 628 219 0 36 chr5 121073951 121074088 -82011444 - FLAM_A SINE Alu -1 132 1 228 67 0 0 chr5 121074263 121074293 -82011239 + (CA)n Simple_repeat Simple_repeat 1 30 0 203 241 181 24 chr5 121074340 121074423 -82011109 + MIR SINE MIR 20 115 -93 477 286 45 13 chr5 121075564 121075718 -82009814 + MIR SINE MIR 64 222 -40 519 242 115 6 chr5 121075996 121076178 -82009354 - L2 LINE L2 0 3313 3112 1244 255 40 5 chr5 121076370 121076743 -82008789 - LTR40c LTR ERVL -49 416 31 271 306 41 0 chr5 121077503 121077601 -82007931 - MIR SINE MIR -77 185 84 897 223 62 48 chr5 121077673 121077964 -82007568 - LTR68 LTR ERV1 -15 725 431 620 87 43 25 chr5 121077964 121078125 -82007407 + (TCTA)n Simple_repeat Simple_repeat 1 164 0 3865 136 3 11 chr5 121078125 121078763 -82006769 - L1MA9 LINE L1 -1 6311 5679 262 122 0 0 chr5 121078763 121078804 -82006728 + L1M2 LINE L1 5436 5476 -836 1830 189 9 9 chr5 121078943 121079200 -82006332 - L1MA9 LINE L1 -654 5658 5402 1525 161 126 0 chr5 121079200 121079461 -82006071 - AluSg SINE Alu -16 294 1 1830 189 9 9 chr5 121079461 121079636 -82005896 - L1MA9 LINE L1 -910 5402 5227 438 30 0 218 chr5 121079636 121079737 -82005795 + MADE1 DNA Mariner 1 79 -1 1830 189 9 9 chr5 121079737 121079765 -82005767 - L1MA9 LINE L1 -1085 5227 5200 2069 146 17 52 chr5 121079767 121080171 -82005361 - MLT1B LTR MaLR 0 390 1 2310 265 126 62 chr5 121080387 121081041 -82004491 - ERVL LTR ERVL -2902 2862 2057 244 137 39 20 chr5 121081041 121081092 -82004440 + HSMAR1 DNA Mariner 1 52 -1235 2310 265 126 62 chr5 121081092 121081526 -82004006 - ERVL LTR ERVL -3707 2057 1652 966 245 40 79 chr5 121082312 121082716 -82002816 - LTR41 LTR ERVL -46 727 340 968 189 21 5 chr5 121082762 121082952 -82002580 - LTR41 LTR ERVL -578 195 3 304 285 119 79 chr5 121083229 121083608 -82001924 - L1M2 LINE L1 -5806 1043 650 217 264 11 11 chr5 121083842 121083929 -82001603 + (CGG)n Simple_repeat Simple_repeat 1 87 0 403 204 155 0 chr5 121086593 121086696 -81998836 - MIR SINE MIR -131 131 13 1909 103 49 86 chr5 121086779 121087129 -81998403 - MER1B DNA MER1_type 0 337 1 1642 190 3 30 chr5 121088396 121088701 -81996831 - AluJo SINE Alu -13 299 3 2311 93 0 0 chr5 121090163 121090452 -81995080 - AluSc SINE Alu -18 291 3 752 226 9 50 chr5 121090568 121090789 -81994743 - MER20 DNA MER1_type 0 219 8 732 209 212 0 chr5 121091547 121091790 -81993742 + MER58B DNA MER1_type 4 340 -1 246 261 113 63 chr5 121092844 121093082 -81992450 - HAL1 LINE L1 -13 2494 2245 345 323 24 55 chr5 121093188 121093352 -81992180 - HAL1b LINE L1 -437 911 753 1354 121 52 0 chr5 121093409 121093658 -81991874 + L1MA8 LINE L1 6020 6281 -10 980 95 0 172 chr5 121093658 121093890 -81991642 - 7SK RNA RNA -1 192 1 205 231 39 93 chr5 121094718 121094835 -81990697 - MIR SINE MIR -12 196 84 324 190 0 0 chr5 121095054 121095112 -81990420 + MIR SINE MIR 203 260 -2 333 262 68 29 chr5 121095119 121095222 -81990310 - L2 LINE L2 -13 3300 3194 194 391 0 0 chr5 121095607 121095676 -81989856 - L3b LINE CR1 -11 1572 1504 408 20 0 0 chr5 121096372 121096421 -81989111 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 121097805 121097826 -81987706 + AT_rich Low_complexity Low_complexity 1 21 0 358 312 125 17 chr5 121098923 121099218 -81986314 + L2 LINE L2 2164 2490 -824 2177 203 69 11 chr5 121099671 121100148 -81985384 - MLT1D LTR MaLR 0 505 1 968 206 69 32 chr5 121100148 121100366 -81985166 - MIR SINE MIR -36 226 1 467 290 55 0 chr5 121100515 121100660 -81984872 - MIR SINE MIR -108 154 2 242 348 11 0 chr5 121100727 121100816 -81984716 + L3 LINE CR1 729 818 -759 311 319 132 23 chr5 121101462 121101728 -81983804 - L2 LINE L2 -11 3302 3008 1381 254 130 37 chr5 121101821 121102519 -81983013 - L2 LINE L2 -830 2484 1722 2327 209 34 13 chr5 121102528 121102568 -81982964 - MLT2B3 LTR ERVL 0 554 516 333 0 0 0 chr5 121102568 121102605 -81982927 + (CA)n Simple_repeat Simple_repeat 2 38 0 2327 209 34 13 chr5 121102605 121103034 -81982498 - MLT2B3 LTR ERVL -38 516 75 405 136 15 0 chr5 121103136 121103202 -81982330 - MLT2B3 LTR ERVL -487 67 1 351 238 0 0 chr5 121103272 121103352 -81982180 + MER116 DNA Mariner 1 80 0 2124 111 7 24 chr5 121104568 121104731 -81980801 - AluSx SINE Alu -17 295 138 2270 98 3 16 chr5 121104731 121105048 -81980484 - AluSp SINE Alu 0 313 1 2124 111 7 24 chr5 121105048 121105182 -81980350 - AluSx SINE Alu -174 138 3 223 226 16 32 chr5 121106562 121106624 -81978908 + CT-rich Low_complexity Low_complexity 5 65 0 279 253 181 0 chr5 121106832 121106915 -81978617 - L2 LINE L2 -7 3265 3168 229 377 26 0 chr5 121107910 121108024 -81977508 + MIR3 SINE MIR 87 203 -5 967 167 182 7 chr5 121108291 121108566 -81976966 + MER33 DNA MER1_type 1 323 -1 26 0 0 0 chr5 121109048 121109074 -81976458 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 121110128 121110163 -81975369 + AT_rich Low_complexity Low_complexity 1 35 0 405 269 122 32 chr5 121110782 121110938 -81974594 + MIR SINE MIR 56 225 -37 215 262 196 9 chr5 121111732 121111839 -81973693 + MIR SINE MIR 25 151 -111 195 368 44 26 chr5 121112572 121112686 -81972846 + L2 LINE L2 3138 3253 -19 449 265 37 15 chr5 121112790 121112926 -81972606 + L2 LINE L2 3175 3313 0 1488 93 65 0 chr5 121114640 121114855 -81970677 + MER30 DNA MER1_type 2 230 0 206 313 30 69 chr5 121115167 121115298 -81970234 - MIR SINE MIR -117 145 20 771 160 124 12 chr5 121115424 121115497 -81970035 + MER53 DNA DNA 1 64 -125 230 71 0 24 chr5 121115497 121115539 -81969993 + (TG)n Simple_repeat Simple_repeat 2 42 0 771 160 124 12 chr5 121115539 121115634 -81969898 + MER53 DNA DNA 64 188 -1 534 329 113 5 chr5 121115921 121116143 -81969389 - MIR SINE MIR 0 262 17 2141 116 0 3 chr5 121116465 121116773 -81968759 - AluSx SINE Alu 0 308 2 185 345 167 29 chr5 121117575 121117850 -81967682 + L2 LINE L2 2590 2902 -412 1142 165 30 0 chr5 121118298 121118498 -81967034 + L1PA16 LINE L1 5961 6166 0 22 94 0 0 chr5 121118710 121118774 -81966758 + AT_rich Low_complexity Low_complexity 1 64 0 905 291 138 26 chr5 121119136 121119758 -81965774 - MER115 DNA AcHobo 0 693 2 2203 109 76 14 chr5 121121216 121121583 -81963949 - MLT1B LTR MaLR 0 390 1 235 314 0 47 chr5 121122108 121122194 -81963338 + L2 LINE L2 3191 3272 0 194 0 39 0 chr5 121122303 121122329 -81963203 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr5 121123103 121123126 -81962406 + AT_rich Low_complexity Low_complexity 1 23 0 1735 140 14 11 chr5 121123771 121124049 -81961483 + AluSx SINE Alu 3 281 -31 369 298 79 101 chr5 121124080 121124446 -81961086 - L1MC/D LINE L1 -478 5643 5283 576 248 165 23 chr5 121124719 121124937 -81960595 - MIR SINE MIR -12 250 2 909 174 15 10 chr5 121125132 121125328 -81960204 - L1MA4 LINE L1 -1 6299 6103 28093 31 0 2 chr5 121125419 121129610 -81955922 - L1PA3 LINE L1 0 6155 1972 1084 73 0 0 chr5 121129606 121129742 -81955790 - L1PA3 LINE L1 -6008 138 3 * 189 0 0 0 chr5 121129937 121129958 -81955574 + (T)n Simple_repeat Simple_repeat 1 21 0 253 288 68 68 chr5 121130043 121130206 -81955326 - Charlie8 DNA MER1_type -2182 235 73 219 288 0 0 chr5 121130219 121130278 -81955254 + (CA)n Simple_repeat Simple_repeat 2 60 0 717 263 0 0 chr5 121130429 121130585 -81954947 + FRAM SINE Alu 1 156 -10 1915 103 6 68 chr5 121131151 121131472 -81954060 - AluSx SINE Alu -11 301 1 284 215 0 31 chr5 121132349 121132414 -81953118 - L2 LINE L2 0 3272 3210 978 238 48 20 chr5 121132559 121132807 -81952725 + MIR SINE MIR 1 255 -7 1937 155 10 0 chr5 121132895 121133198 -81952334 - AluJb SINE Alu -4 308 3 458 106 0 0 chr5 121134992 121135058 -81950474 + MER116 DNA Mariner 1 66 -14 538 264 52 6 chr5 121137428 121137602 -81947930 - MIR SINE MIR -49 213 32 294 312 80 46 chr5 121137947 121138184 -81947348 + L2 LINE L2 2812 3056 -216 318 280 193 80 chr5 121138192 121138581 -81946951 - L2 LINE L2 -3 3269 2837 2180 222 78 32 chr5 121138587 121139307 -81946225 + L1ME2 LINE L1 5404 6156 -8 251 85 85 0 chr5 121139321 121139380 -81946152 + (CAATA)n Simple_repeat Simple_repeat 2 65 0 244 196 18 0 chr5 121139403 121139459 -81946073 + L1ME LINE L1 5843 5899 -222 34 24 0 0 chr5 121139653 121139694 -81945838 + AT_rich Low_complexity Low_complexity 1 41 0 1497 183 29 7 chr5 121139694 121139973 -81945559 - AluJo SINE Alu -25 287 3 1982 152 3 0 chr5 121140030 121140333 -81945199 - AluSx SINE Alu -8 304 1 2630 161 54 82 chr5 121140660 121141041 -81944491 - L1MB3 LINE L1 0 6183 5778 343 65 0 0 chr5 121141041 121141087 -81944445 - MADE1 DNA Mariner -34 46 1 2630 161 54 82 chr5 121141087 121141268 -81944264 - L1MB3 LINE L1 -405 5778 5593 292 274 83 24 chr5 121141405 121141573 -81943959 - L1ME4a LINE L1 -219 5902 5725 594 143 68 48 chr5 121141883 121142030 -81943502 - L1MB3 LINE L1 -582 5601 5452 654 241 87 5 chr5 121142262 121142469 -81943063 - L1ME4a LINE L1 -2270 5538 5315 260 297 58 8 chr5 121142529 121142650 -81942882 - L2 LINE L2 -71 3237 3116 25 31 0 0 chr5 121143071 121143103 -81942429 + AT_rich Low_complexity Low_complexity 1 32 0 39 38 0 0 chr5 121143775 121143828 -81941704 + AT_rich Low_complexity Low_complexity 1 53 0 4134 105 19 47 chr5 121144905 121145631 -81939901 - L1MA4A LINE L1 -5 6298 5593 193 400 12 0 chr5 121146272 121146357 -81939175 + L2 LINE L2 2568 2653 -661 447 264 32 16 chr5 121146443 121146568 -81938964 - L2 LINE L2 -2 3311 3185 1849 171 0 9 chr5 121147955 121148270 -81937262 - AluJo SINE Alu 0 312 1 189 358 0 37 chr5 121148695 121148776 -81936756 - L2 LINE L2 -9 3304 3227 2287 96 3 0 chr5 121148778 121149079 -81936453 + AluSp SINE Alu 1 302 -11 485 260 195 75 chr5 121149773 121150157 -81935375 - MLT1K LTR MaLR 0 588 159 655 200 10 80 chr5 121150559 121150759 -81934773 - L1MC4 LINE L1 0 8042 7857 2890 175 71 2 chr5 121150759 121151278 -81934254 + MER68 LTR ERV1 2 556 -6 586 244 165 19 chr5 121151357 121151626 -81933906 - L1ME3A LINE L1 0 6170 5861 3718 193 53 60 chr5 121151658 121153482 -81932050 - L1MB8 LINE L1 -83 6095 4290 1790 220 107 17 chr5 121153472 121154004 -81931528 - L1ME3A LINE L1 -280 5884 5305 * 396 55 0 0 chr5 121154009 121154064 -81931468 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 6313 60 13 1 chr5 121154064 121154877 -81930655 - L1PA7 LINE L1 -16 6138 5313 514 136 0 27 chr5 121154872 121154982 -81930550 - L1P LINE L1 -2833 3313 3207 * 271 269 62 0 chr5 121154961 121155091 -81930441 - L1ME3A LINE L1 -834 5312 5175 * 42 71 0 0 chr5 121155181 121155265 -81930267 + AT_rich Low_complexity Low_complexity 1 84 0 590 274 158 42 chr5 121155323 121155779 -81929753 - L1MB8 LINE L1 -2035 4111 3603 204 291 0 0 chr5 121156401 121156456 -81929076 + CT-rich Low_complexity Low_complexity 4 58 0 1560 177 138 38 chr5 121156878 121157329 -81928203 - LTR54B LTR ERV1 -2 496 1 33 25 0 0 chr5 121157542 121157582 -81927950 + AT_rich Low_complexity Low_complexity 1 40 0 833 11 0 0 chr5 121157583 121157677 -81927855 - L1PA3 LINE L1 -6 6149 6056 382 22 0 0 chr5 121157677 121157722 -81927810 + L1PA3 LINE L1 5838 5882 -273 2130 115 3 0 chr5 121157863 121158159 -81927373 - AluSx SINE Alu -15 297 1 253 378 62 36 chr5 121158572 121158908 -81926624 + L2 LINE L2 1702 2046 -1268 4116 222 129 38 chr5 121158992 121160411 -81925121 - L1MC4 LINE L1 -130 7912 6365 282 205 13 0 chr5 121160408 121160486 -81925046 - L1ME2 LINE L1 -1 6163 6085 * 231 280 27 0 chr5 121160907 121160982 -81924550 + HsTC2 DNA Tc2 28 104 -1794 431 319 125 19 chr5 121162379 121162595 -81922937 - MIR SINE MIR -13 249 11 28 0 0 0 chr5 121165351 121165379 -81920153 + AT_rich Low_complexity Low_complexity 1 28 0 1724 134 94 0 chr5 121166171 121166448 -81919084 + AluSx SINE Alu 1 303 -9 1634 176 10 10 chr5 121166579 121166868 -81918664 - AluJo SINE Alu -23 289 1 21 57 0 0 chr5 121167790 121167825 -81917707 + AT_rich Low_complexity Low_complexity 1 35 0 203 61 30 0 chr5 121169314 121169347 -81916185 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 941 237 29 44 chr5 121169609 121169951 -81915581 - L1MC5 LINE L1 -94 7867 7531 731 159 25 37 chr5 121169974 121170137 -81915395 - L1MA4A LINE L1 -5 6298 6138 2300 244 71 31 chr5 121170672 121172256 -81913276 - L1ME3 LINE L1 -6 6225 4578 908 240 131 11 chr5 121172264 121172639 -81912893 - L1ME3 LINE L1 -1815 4400 3981 353 335 57 57 chr5 121172647 121172910 -81912622 - L1ME3 LINE L1 -6121 275 13 288 111 0 0 chr5 121173607 121173652 -81911880 + (CA)n Simple_repeat Simple_repeat 2 46 0 569 275 99 0 chr5 121173696 121173878 -81911654 - MIR SINE MIR -5 257 58 2309 76 3 10 chr5 121174115 121174417 -81911115 - AluY SINE Alu -11 300 1 262 300 14 0 chr5 121174464 121174534 -81910998 - MIR SINE MIR -146 116 46 402 21 0 0 chr5 121174569 121174616 -81910916 + (TG)n Simple_repeat Simple_repeat 2 48 0 693 160 237 0 chr5 121176341 121176497 -81909035 + MER3 DNA MER1_type 13 205 -4 458 159 56 0 chr5 121176834 121176941 -81908591 - L1MA4 LINE L1 0 6300 6188 304 182 93 18 chr5 121176942 121177055 -81908477 + L1MA4 LINE L1 6115 6235 -70 1680 171 69 7 chr5 121177930 121178205 -81907327 - AluJo SINE Alu -20 292 1 456 316 134 35 chr5 121179419 121179814 -81905718 + L3 LINE CR1 1097 1530 -47 340 241 157 66 chr5 121180852 121181018 -81904514 - MLT1J LTR MaLR -2 509 329 243 223 0 106 chr5 121181460 121181554 -81903978 - MER103 DNA DNA -63 103 20 35 0 0 0 chr5 121184353 121184388 -81901144 + AT_rich Low_complexity Low_complexity 1 35 0 700 193 115 37 chr5 121185673 121185891 -81899641 + MER106A DNA MER1_type 1 235 -1 223 398 115 26 chr5 121186222 121186604 -81898928 + L2 LINE L2 2358 2773 -541 963 277 81 61 chr5 121186623 121187128 -81898404 - MLT1G1 LTR MaLR 0 595 81 272 122 24 0 chr5 121187307 121187348 -81898184 - MLT1J LTR MaLR -213 329 288 456 278 187 5 chr5 121190880 121191078 -81894454 + L2 LINE L2 3075 3308 -5 366 359 76 20 chr5 121191579 121191880 -81893652 + HAL1 LINE L1 1156 1473 -1034 312 254 51 90 chr5 121191938 121192115 -81893417 + HAL1b LINE L1 505 674 -674 313 332 64 30 chr5 121192371 121192573 -81892959 + L2 LINE L2 2201 2409 -905 268 160 100 0 chr5 121192606 121192656 -81892876 - MER94 DNA DNA -78 56 2 272 0 51 0 chr5 121192718 121192757 -81892775 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2185 82 0 38 chr5 121192757 121193050 -81892482 - AluY SINE Alu -1 320 1 278 336 81 69 chr5 121193054 121193414 -81892118 + L2 LINE L2 2521 2884 -430 2296 98 3 0 chr5 121193531 121193827 -81891705 + AluSp SINE Alu 1 297 -16 2188 113 3 3 chr5 121193865 121194165 -81891367 + AluSx SINE Alu 1 300 -12 225 315 0 0 chr5 121194241 121194295 -81891237 + L2 LINE L2 2985 3038 -234 286 317 6 31 chr5 121194500 121194661 -81890871 + L1ME LINE L1 5617 5773 -348 575 298 38 83 chr5 121195133 121195639 -81889893 - MLT1J LTR MaLR -24 487 5 429 232 120 22 chr5 121196265 121196530 -81889002 - MER46C DNA MER2_type 0 338 1 24 0 0 0 chr5 121197002 121197026 -81888506 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 121197290 121197319 -81888213 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 121198402 121198428 -81887104 + AT_rich Low_complexity Low_complexity 1 26 0 303 284 179 0 chr5 121199666 121199800 -81885732 + MIR3 SINE MIR 34 191 -17 306 266 129 36 chr5 121200318 121200457 -81885075 + MIR SINE MIR 39 190 -72 1970 184 89 21 chr5 121201391 121201864 -81883668 - MLT1D LTR MaLR 0 505 1 22 0 0 0 chr5 121202456 121202478 -81883054 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 121202547 121202577 -81882955 + AT_rich Low_complexity Low_complexity 1 30 0 2138 130 3 0 chr5 121202761 121203061 -81882471 - AluSx SINE Alu -11 301 1 703 279 115 51 chr5 121203370 121204345 -81881187 - L1MEc LINE L1 -4574 1822 786 231 308 34 8 chr5 121205393 121205510 -81880022 - L1M4 LINE L1 -1530 4616 4497 366 42 0 0 chr5 121205632 121205680 -81879852 + (TG)n Simple_repeat Simple_repeat 2 49 0 407 324 162 11 chr5 121206179 121206364 -81879168 - MIR SINE MIR -22 240 28 21 0 0 0 chr5 121206773 121206794 -81878738 + AT_rich Low_complexity Low_complexity 1 21 0 239 325 70 19 chr5 121207435 121207592 -81877940 + MIR SINE MIR 13 177 -85 1004 146 0 37 chr5 121211064 121211228 -81874304 + FRAM SINE Alu 1 150 -26 402 57 0 0 chr5 121211228 121211281 -81874251 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 1707 88 22 0 chr5 121212193 121212440 -81873092 - AluSp SINE Alu 0 306 55 21 57 0 0 chr5 121212651 121212686 -81872846 + AT_rich Low_complexity Low_complexity 1 35 0 1354 154 0 14 chr5 121212950 121213048 -81872484 + MER2 DNA MER2_type 1 99 -246 1990 167 34 0 chr5 121213048 121213402 -81872130 + MER47A DNA MER2_type 1 366 0 1354 154 0 14 chr5 121213402 121213517 -81872015 + MER2 DNA MER2_type 99 211 -134 338 286 13 0 chr5 121213537 121213614 -81871918 + MER2 DNA MER2_type 268 345 0 241 275 50 12 chr5 121214106 121214186 -81871346 + MER5C DNA MER1_type 4 86 -238 1733 142 25 7 chr5 121214585 121214859 -81870673 + AluJb SINE Alu 1 279 -33 281 281 46 20 chr5 121215094 121215247 -81870285 - L1ME4a LINE L1 -9 6112 5956 373 279 87 46 chr5 121215466 121215813 -81869719 - L1ME4a LINE L1 -450 5671 5311 186 71 0 0 chr5 121216185 121216213 -81869319 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 2363 71 0 3 chr5 121216741 121217036 -81868496 - AluY SINE Alu -17 294 1 23 0 0 0 chr5 121217185 121217208 -81868324 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 121217745 121217773 -81867759 + AT_rich Low_complexity Low_complexity 1 28 0 2184 115 10 0 chr5 121219887 121220264 -81865268 - AluSx SINE Alu 0 380 1 2257 97 0 16 chr5 121221883 121222193 -81863339 + AluSg SINE Alu 6 310 0 7809 113 72 2 chr5 121223063 121224277 -81861255 - HSMAR2 DNA Mariner -2 1300 2 244 352 57 9 chr5 121224292 121224397 -81861135 + MIR SINE MIR 32 141 -67 288 83 0 0 chr5 121224498 121224534 -81860998 - U2 snRNA snRNA -152 36 1 446 287 26 56 chr5 121225097 121225292 -81860240 + MIR SINE MIR 12 200 -62 2310 193 126 59 chr5 121225522 121225864 -81859668 - Charlie2 DNA MER1_type -29 2833 2516 243 0 0 0 chr5 121225864 121225891 -81859641 + (TG)n Simple_repeat Simple_repeat 2 28 0 2310 193 126 59 chr5 121225891 121226228 -81859304 - Charlie2 DNA MER1_type -346 2516 2203 6335 83 16 17 chr5 121226228 121227777 -81857755 - SVA Other Other -835 1386 4 2310 193 126 59 chr5 121227777 121227998 -81857534 - Charlie2 DNA MER1_type -659 2203 1870 25 51 0 0 chr5 121230141 121230180 -81855352 + AT_rich Low_complexity Low_complexity 1 39 0 1886 130 7 27 chr5 121230180 121230472 -81855060 - AluSx SINE Alu -25 287 2 276 242 75 85 chr5 121231031 121231269 -81854263 - L1P4 LINE L1 -324 5842 5607 256 194 108 54 chr5 121231615 121231708 -81853824 + MIR SINE MIR 159 256 -6 224 328 62 0 chr5 121231789 121231853 -81853679 - L2 LINE L2 -54 3259 3192 21 0 0 0 chr5 121232683 121232704 -81852828 + AT_rich Low_complexity Low_complexity 1 21 0 812 147 0 0 chr5 121233589 121233705 -81851827 + FLAM_A SINE Alu 1 116 -17 180 0 0 0 chr5 121233708 121233728 -81851804 + (T)n Simple_repeat Simple_repeat 1 20 0 2323 105 0 0 chr5 121235214 121235547 -81849985 - L1PB1 LINE L1 -7 6144 5812 21 0 0 0 chr5 121236364 121236385 -81849147 + AT_rich Low_complexity Low_complexity 1 21 0 2156 128 0 0 chr5 121236865 121237162 -81848370 - AluSx SINE Alu -13 299 3 1895 141 60 20 chr5 121237170 121237517 -81848015 - THE1C LTR MaLR 0 375 15 217 324 0 0 chr5 121237638 121237709 -81847823 + (TA)n Simple_repeat Simple_repeat 2 72 0 1400 224 92 39 chr5 121238582 121239019 -81846513 - MLT1C LTR MaLR -2 465 6 25 31 0 0 chr5 121239767 121239799 -81845733 + AT_rich Low_complexity Low_complexity 1 32 0 246 336 112 0 chr5 121240354 121240488 -81845044 - MIR SINE MIR -107 155 7 528 295 139 24 chr5 121240960 121241211 -81844321 - MER102b DNA MER1_type -51 290 11 180 77 0 0 chr5 121241687 121241713 -81843819 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1077 320 114 57 chr5 121242491 121244048 -81841484 + L2 LINE L2 1326 2972 -342 236 302 191 0 chr5 121244159 121244285 -81841247 + L2 LINE L2 3164 3313 0 1918 175 79 3 chr5 121245380 121245746 -81839786 + MSTD LTR MaLR 1 394 -2 267 322 63 49 chr5 121247336 121247479 -81838053 - MER5A DNA MER1_type -24 165 21 605 266 111 60 chr5 121250217 121250751 -81834781 - MER34B LTR ERV1 0 565 5 833 261 74 26 chr5 121250927 121251237 -81834295 - L2 LINE L2 -79 3234 2910 342 227 118 0 chr5 121251236 121251346 -81834186 + L2 LINE L2 3191 3313 0 * 311 255 32 83 chr5 121252998 121253155 -81832377 - MER5A DNA MER1_type -3 186 38 294 278 8 63 chr5 121253156 121253282 -81832250 - MIR SINE MIR -113 149 31 22 56 0 0 chr5 121253980 121254016 -81831516 + AT_rich Low_complexity Low_complexity 1 36 0 797 281 18 13 chr5 121255102 121255326 -81830206 + MIR SINE MIR 17 241 -21 559 89 13 0 chr5 121255456 121255535 -81829997 - MADE1 DNA Mariner 0 80 1 643 214 50 45 chr5 121255586 121255787 -81829745 - MIR SINE MIR -29 233 32 359 266 21 0 chr5 121256057 121256151 -81829381 + MIR SINE MIR 159 254 -8 182 36 0 36 chr5 121257415 121257443 -81828089 + (CATTT)n Simple_repeat Simple_repeat 2 28 0 274 245 32 21 chr5 121257462 121257556 -81827976 - MIR SINE MIR -164 98 4 377 324 24 47 chr5 121257582 121257752 -81827780 - MIR SINE MIR -34 228 63 195 42 0 0 chr5 121261213 121261237 -81824295 + (A)n Simple_repeat Simple_repeat 1 24 0 2427 80 0 0 chr5 121263797 121264096 -81821436 - AluSg1 SINE Alu -10 299 1 2185 118 0 0 chr5 121264605 121264894 -81820638 + AluSq SINE Alu 1 289 -24 252 0 0 0 chr5 121265901 121265929 -81819603 + (A)n Simple_repeat Simple_repeat 1 28 0 617 219 118 12 chr5 121266000 121266169 -81819363 + MER3 DNA MER1_type 1 187 -22 493 234 172 14 chr5 121266259 121266404 -81819128 + MER5A DNA MER1_type 10 177 -12 665 273 202 27 chr5 121266769 121267175 -81818357 + L2 LINE L2 2837 3313 0 216 254 18 0 chr5 121267251 121267306 -81818226 + L2 LINE L2 2703 2758 -556 831 247 163 35 chr5 121267407 121267812 -81817720 + MLT1L LTR MaLR 41 497 -118 465 190 20 0 chr5 121269510 121269610 -81815922 + MER58B DNA MER1_type 222 323 -18 385 278 26 17 chr5 121269746 121269861 -81815671 + MIR SINE MIR 20 135 -73 1085 232 137 18 chr5 121270914 121271353 -81814179 + MLT1D LTR MaLR 12 502 -3 366 329 108 28 chr5 121272097 121272450 -81813082 + L1MC/D LINE L1 4860 5240 -906 324 306 16 24 chr5 121272457 121272581 -81812951 - L2 LINE L2 0 3313 3191 310 272 78 43 chr5 121272728 121272960 -81812572 + L1MC/D LINE L1 5314 5553 -2255 1435 186 25 88 chr5 121273021 121273420 -81812112 + MLT1A2 LTR MaLR 1 374 0 837 230 33 19 chr5 121273519 121273732 -81811800 + MER58A DNA MER1_type 3 218 -6 36 23 0 0 chr5 121273763 121273806 -81811726 + AT_rich Low_complexity Low_complexity 1 43 0 31 0 0 0 chr5 121274059 121274090 -81811442 + AT_rich Low_complexity Low_complexity 1 31 0 331 280 96 0 chr5 121274090 121274214 -81811318 - MIR SINE MIR -66 142 26 182 170 226 0 chr5 121277186 121277239 -81808293 - MIR3 SINE MIR 0 208 144 251 321 46 9 chr5 121277508 121277617 -81807915 + MER5A DNA MER1_type 28 140 -49 22 35 0 0 chr5 121277617 121277646 -81807886 + AT_rich Low_complexity Low_complexity 1 29 0 1088 144 53 29 chr5 121279631 121279839 -81805693 + AluJo SINE Alu 72 284 -28 252 86 0 0 chr5 121279839 121279874 -81805658 + (TAAG)n Simple_repeat Simple_repeat 1 35 0 330 330 20 0 chr5 121279905 121280005 -81805527 - MIR3 SINE MIR -49 159 58 775 239 0 0 chr5 121280537 121280696 -81804836 - FRAM SINE Alu -17 159 1 261 0 0 0 chr5 121284398 121284427 -81801105 + (TG)n Simple_repeat Simple_repeat 1 29 0 375 270 99 0 chr5 121284788 121284899 -81800633 - MIR SINE MIR -82 180 59 27 29 0 0 chr5 121285551 121285585 -81799947 + AT_rich Low_complexity Low_complexity 1 34 0 448 291 98 15 chr5 121285639 121285904 -81799628 - L1ME LINE L1 -344 5777 5491 2256 116 0 0 chr5 121285956 121286259 -81799273 - AluSc SINE Alu -6 303 1 401 319 86 17 chr5 121286269 121286501 -81799031 - MIR SINE MIR -13 249 2 491 213 0 8 chr5 121286707 121286817 -81798715 + (TATATG)n Simple_repeat Simple_repeat 2 112 -10 2180 177 11 49 chr5 121286817 121287268 -81798264 - Tigger2a DNA MER2_type 0 434 1 491 213 0 8 chr5 121287268 121287279 -81798253 + (TATATG)n Simple_repeat Simple_repeat 112 122 0 257 241 21 43 chr5 121287325 121287372 -81798160 - L1ME LINE L1 -273 5848 5802 2453 114 14 25 chr5 121287372 121287740 -81797792 - THE1B LTR MaLR 0 364 1 257 241 21 43 chr5 121287740 121287833 -81797699 - L1ME LINE L1 -319 5802 5711 312 284 26 35 chr5 121287841 121287957 -81797575 + L1ME LINE L1 5679 5793 -377 261 0 0 0 chr5 121288035 121288064 -81797468 + (CA)n Simple_repeat Simple_repeat 1 29 0 187 271 14 14 chr5 121288396 121288466 -81797066 + L2 LINE L2 1702 1771 -1543 340 339 45 40 chr5 121288807 121289031 -81796501 + MLT1I LTR MaLR 159 383 -26 536 340 283 19 chr5 121289047 121290004 -81795528 + L2 LINE L2 1767 2976 -338 2484 168 19 0 chr5 121290143 121290567 -81794965 - MSTB1 LTR MaLR 0 432 1 27 29 0 0 chr5 121290731 121290765 -81794767 + AT_rich Low_complexity Low_complexity 1 34 0 261 272 39 29 chr5 121290967 121291070 -81794462 - L1ME LINE L1 -405 5716 5613 212 158 18 0 chr5 121291151 121291208 -81794324 + A-rich Low_complexity Low_complexity 5 62 0 381 307 104 32 chr5 121291310 121291561 -81793971 - L1ME LINE L1 -1123 5023 4755 25 0 0 0 chr5 121291926 121291951 -81793581 + AT_rich Low_complexity Low_complexity 1 25 0 366 268 132 66 chr5 121292763 121292976 -81792556 - MLT1K LTR MaLR -7 581 355 248 302 19 9 chr5 121293158 121293264 -81792268 - MLT1K LTR MaLR -459 129 23 1647 214 33 91 chr5 121293265 121293555 -81791977 + MLT2B1 LTR ERVL 1 245 -275 1919 165 3 7 chr5 121293555 121293864 -81791668 + AluSx SINE Alu 1 308 -4 1647 214 33 91 chr5 121293864 121294125 -81791407 + MLT2B1 LTR ERVL 245 520 0 421 214 0 0 chr5 121294481 121294565 -81790967 - Tigger5 DNA MER2_type 0 2323 2240 2063 200 82 0 chr5 121294577 121294977 -81790555 - Tigger5 DNA MER2_type -1884 439 7 248 200 67 0 chr5 121295415 121295475 -81790057 + MIR SINE MIR 83 146 -62 909 218 35 11 chr5 121295480 121295654 -81789878 + MER45A DNA AcHobo 1 178 0 424 227 53 67 chr5 121295724 121295874 -81789658 + MER103 DNA DNA 19 166 0 203 394 38 15 chr5 121296139 121296271 -81789261 + L2 LINE L2 2875 3009 -263 * 588 369 74 35 chr5 121296249 121297022 -81788510 + L2 LINE L2 2505 3311 -2 191 121 0 155 chr5 121297252 121297310 -81788222 + L2 LINE L2 3264 3312 -1 265 236 125 21 chr5 121297769 121297913 -81787619 + MIR SINE MIR 98 256 -6 1808 141 50 0 chr5 121299021 121299298 -81786234 - AluSx SINE Alu -17 295 5 1432 102 5 0 chr5 121300573 121300778 -81784754 - L1MA3 LINE L1 0 6305 6100 276 308 41 59 chr5 121300974 121301130 -81784402 + MIR SINE MIR 18 175 -67 208 327 52 52 chr5 121301910 121302063 -81783469 + L3 LINE CR1 1419 1571 -6 188 260 0 40 chr5 121302904 121302954 -81782578 + MER5A DNA MER1_type 100 147 -42 186 273 136 34 chr5 121302927 121303015 -81782517 + MIR SINE MIR 77 173 -89 * 2291 288 160 50 chr5 121303107 121304683 -81780849 + L2 LINE L2 1528 3291 -22 236 75 0 25 chr5 121305010 121305050 -81780482 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 246 313 100 0 chr5 121305461 121305541 -81779991 - L2 LINE L2 -19 3294 3207 194 328 31 0 chr5 121307716 121307780 -81777752 + L2 LINE L2 3197 3262 -10 285 242 0 0 chr5 121309524 121309586 -81775946 - L2 LINE L2 0 3272 3211 263 380 64 62 chr5 121309662 121309923 -81775609 + L2 LINE L2 2833 3097 -175 2308 77 0 32 chr5 121309923 121310236 -81775296 - AluY SINE Alu -8 303 1 263 380 64 62 chr5 121310236 121310413 -81775119 + L2 LINE L2 3097 3272 0 395 281 219 5 chr5 121310470 121310662 -81774870 - MIR SINE MIR -12 250 18 2140 141 18 59 chr5 121311372 121311763 -81773769 + THE1C LTR MaLR 1 375 0 10528 131 31 18 chr5 121311763 121313323 -81772209 + THE1C-int LTR MaLR 1 1580 0 2297 130 15 56 chr5 121313323 121313714 -81771818 + THE1C LTR MaLR 1 375 0 5662 128 4 0 chr5 121313890 121314724 -81770808 - L1PA15 LINE L1 -13 6152 5314 213 310 115 9 chr5 121315627 121315740 -81769792 - L2 LINE L2 -191 3081 2957 1573 177 20 10 chr5 121316901 121317195 -81768337 - AluJo SINE Alu -15 297 1 237 190 0 35 chr5 121317831 121317889 -81767643 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 225 245 0 0 chr5 121319188 121319241 -81766291 - L2 LINE L2 -71 3242 3190 188 316 129 32 chr5 121319333 121319488 -81766044 + MIR3 SINE MIR 2 171 -37 261 233 0 0 chr5 121320362 121320405 -81765127 + L2 LINE L2 3248 3290 -23 1050 106 0 0 chr5 121321370 121321511 -81764021 + AluSg/x SINE Alu 157 297 -15 434 216 35 72 chr5 121321660 121321805 -81763727 - L1MC4 LINE L1 -2 8040 7783 315 247 49 0 chr5 121321850 121321931 -81763601 - L1MC4 LINE L1 -145 7897 7813 1741 175 23 3 chr5 121321931 121322240 -81763292 - MLT1A1 LTR MaLR -50 315 1 1735 219 134 10 chr5 121322245 121322730 -81762802 - L1MC4 LINE L1 -330 7712 7168 442 219 78 23 chr5 121323326 121323454 -81762078 - MIR SINE MIR -48 214 80 203 222 56 37 chr5 121323979 121324033 -81761499 + MIR3 SINE MIR 129 183 -25 635 322 8 30 chr5 121324955 121325222 -81760310 - MIR SINE MIR 0 262 2 813 189 8 0 chr5 121326200 121326332 -81759200 - FLAM_C SINE Alu 0 133 1 486 243 115 42 chr5 121326848 121327035 -81758497 + MIR SINE MIR 32 229 -33 429 20 0 0 chr5 121327123 121327173 -81758359 + (TG)n Simple_repeat Simple_repeat 1 50 0 249 287 164 15 chr5 121327943 121328138 -81757394 - L1ME LINE L1 -317 5804 5581 22 70 0 0 chr5 121328603 121328646 -81756886 + AT_rich Low_complexity Low_complexity 1 43 0 328 270 75 143 chr5 121329194 121329675 -81755857 - L3 LINE CR1 -355 1222 775 1146 265 117 55 chr5 121333049 121333584 -81751948 - MLT1F1 LTR MaLR -5 562 1 306 315 24 61 chr5 121333775 121333940 -81751592 + MLT1K LTR MaLR 84 242 -346 3743 153 57 20 chr5 121334181 121334944 -81750588 - L1MB8 LINE L1 -19 6159 5308 2156 115 0 0 chr5 121335037 121335324 -81750208 - AluSg SINE Alu -23 287 1 431 276 21 55 chr5 121335443 121335588 -81749944 + MLT1H1 LTR MaLR 42 181 -374 388 263 88 12 chr5 121335692 121335852 -81749680 - L1ME4a LINE L1 0 6121 5950 190 183 0 100 chr5 121339465 121339525 -81746007 - MIR3 SINE MIR -15 193 140 687 292 165 5 chr5 121340044 121340481 -81745051 - L2 LINE L2 -57 3256 2749 536 226 304 0 chr5 121340507 121340688 -81744844 - MIR SINE MIR -10 252 17 310 281 110 76 chr5 121340758 121341204 -81744328 + L2 LINE L2 2738 3208 -105 314 348 133 41 chr5 121341663 121342008 -81743524 - L2 LINE L2 0 3272 2896 184 292 250 0 chr5 121342174 121342294 -81743238 + L2 LINE L2 2906 3055 -217 211 313 0 0 chr5 121343901 121343965 -81741567 + (TA)n Simple_repeat Simple_repeat 1 64 0 190 97 48 32 chr5 121344000 121344062 -81741470 + (TA)n Simple_repeat Simple_repeat 1 63 0 415 299 115 18 chr5 121344351 121344568 -81740964 - MIR SINE MIR -13 249 12 557 290 137 10 chr5 121344799 121345031 -81740501 + MIR SINE MIR 3 262 0 979 203 39 35 chr5 121345255 121345487 -81740045 - MIR SINE MIR -2 260 28 2058 162 51 17 chr5 121345968 121346319 -81739213 + MLT1A1 LTR MaLR 3 365 0 1039 193 17 0 chr5 121347487 121347663 -81737869 + MER5A DNA MER1_type 6 184 -5 181 262 0 0 chr5 121347694 121347736 -81737796 - MIR SINE MIR -118 144 103 337 244 65 88 chr5 121348556 121348773 -81736759 - L1MEd LINE L1 -4169 2141 1930 961 280 74 28 chr5 121349048 121349592 -81735940 - L1MEd LINE L1 -4640 1670 1054 243 214 0 0 chr5 121349659 121349701 -81735831 + L2 LINE L2 3226 3267 -5 292 343 55 14 chr5 121349773 121349919 -81735613 - MIR3 SINE MIR -48 160 9 180 152 0 0 chr5 121351981 121352014 -81733518 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 1611 266 78 17 chr5 121352054 121352935 -81732597 - L2 LINE L2 -52 3261 2323 42 20 0 0 chr5 121353738 121353787 -81731745 + AT_rich Low_complexity Low_complexity 1 49 0 234 240 0 0 chr5 121354366 121354416 -81731116 + (TG)n Simple_repeat Simple_repeat 1 50 0 584 106 11 0 chr5 121355194 121355288 -81730244 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 2843 7 0 0 chr5 121355511 121355818 -81729714 - AluYa5 SINE Alu -4 307 1 184 373 0 13 chr5 121355818 121355882 -81729650 - MIR SINE MIR -43 219 155 270 298 53 26 chr5 121355905 121356019 -81729513 - MLT1K LTR MaLR -50 538 422 398 295 9 19 chr5 121356263 121356368 -81729164 + MIR SINE MIR 20 123 -139 192 77 0 0 chr5 121356556 121356582 -81728950 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 121356724 121356745 -81728787 + AT_rich Low_complexity Low_complexity 1 21 0 385 290 94 49 chr5 121357567 121357791 -81727741 + L3 LINE CR1 1202 1435 -142 754 259 63 72 chr5 121358014 121358346 -81727186 - MER102b DNA MER1_type -12 329 1 372 337 39 10 chr5 121358643 121358848 -81726684 + MIR SINE MIR 34 244 -18 236 374 103 13 chr5 121361190 121361345 -81724187 - L2 LINE L2 -1 3271 3103 225 376 93 25 chr5 121361342 121361621 -81723911 + L2 LINE L2 2680 2977 -337 * 328 329 159 0 chr5 121361992 121362162 -81723370 - MIR SINE MIR -7 255 59 513 286 14 0 chr5 121362327 121362467 -81723065 + MIR SINE MIR 112 253 -9 188 238 60 48 chr5 121362407 121362491 -81723041 - MIR SINE MIR -5 257 173 * 2206 87 40 7 chr5 121363082 121363381 -81722151 - AluSx SINE Alu -2 310 2 768 209 70 16 chr5 121363441 121363628 -81721904 + MER105 DNA DNA 4 200 -4 433 147 0 0 chr5 121363673 121363741 -81721791 + MER116 DNA Mariner 7 74 -6 332 271 84 1 chr5 121363755 121363933 -81721599 - L1MC/D LINE L1 -708 5454 5294 375 289 75 20 chr5 121364059 121364364 -81721168 - L1MC/D LINE L1 -1028 5118 4797 1568 219 34 82 chr5 121364882 121365530 -81720002 - L1MC5 LINE L1 -469 7492 6876 276 261 80 11 chr5 121365546 121365609 -81719923 + MER45B DNA AcHobo 2 70 -970 1153 204 125 43 chr5 121365609 121366023 -81719509 - MLT1C LTR MaLR 0 467 16 * 4053 204 73 11 chr5 121366012 121366953 -81718579 + MER45B DNA AcHobo 41 1040 0 848 220 18 22 chr5 121366955 121367178 -81718354 - L1MC5 LINE L1 -1069 6892 6671 1666 206 23 11 chr5 121367184 121367533 -81717999 + MLT1A1 LTR MaLR 1 353 -12 2373 252 84 33 chr5 121367591 121367869 -81717663 - L1ME3A LINE L1 0 6239 5977 306 0 0 0 chr5 121367869 121367903 -81717629 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2373 252 84 33 chr5 121367903 121368840 -81716692 - L1ME3A LINE L1 -262 5977 4960 * 3969 203 31 36 chr5 121368838 121370102 -81715430 - L1MA9 LINE L1 -39 6273 5018 398 232 123 100 chr5 121370100 121370668 -81714864 - L1ME3A LINE L1 -1225 4990 4410 * 471 246 144 41 chr5 121370691 121371019 -81714513 - LTR40c LTR ERVL -30 435 115 2006 292 45 15 chr5 121371163 121372030 -81713502 - L1ME3A LINE L1 -1880 4335 3443 654 263 138 57 chr5 121372050 121372751 -81712781 - L1ME3A LINE L1 -3012 3203 2418 1908 140 70 20 chr5 121372751 121373108 -81712424 + THE1C LTR MaLR 1 375 0 654 263 138 57 chr5 121373108 121373267 -81712265 - L1ME3A LINE L1 -3797 2418 2273 434 297 62 10 chr5 121373281 121373473 -81712059 - L1ME3A LINE L1 -4094 2302 2101 357 283 140 25 chr5 121373677 121373956 -81711576 - L1ME3A LINE L1 -4579 1817 1507 22 56 0 0 chr5 121374053 121374089 -81711443 + AT_rich Low_complexity Low_complexity 1 36 0 2160 117 3 0 chr5 121374166 121374464 -81711068 + AluSp SINE Alu 1 299 -14 264 130 0 0 chr5 121374655 121374701 -81710831 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 573 276 21 16 chr5 121375522 121375714 -81709818 - L1ME3A LINE L1 -6166 230 38 1721 165 0 17 chr5 121376545 121376836 -81708696 - AluJb SINE Alu -26 286 1 2123 71 4 4 chr5 121377575 121377844 -81707688 + AluY SINE Alu 30 298 -13 1997 150 26 184 chr5 121377849 121378080 -81707452 + L1MA9 LINE L1 5631 5897 -415 192 77 0 0 chr5 121378080 121378106 -81707426 + (TA)n Simple_repeat Simple_repeat 2 27 0 1997 150 26 184 chr5 121378106 121378459 -81707073 + L1MA9 LINE L1 5897 6068 -244 2050 99 111 101 chr5 121378459 121378883 -81706649 + MSTA LTR MaLR 1 428 0 1997 150 26 184 chr5 121378883 121379062 -81706470 + L1MA9 LINE L1 6068 6274 -38 2323 153 36 22 chr5 121379433 121379846 -81705686 - MSTB LTR MaLR 0 426 8 3683 174 41 8 chr5 121382441 121383153 -81702379 - L1MB7 LINE L1 -19 6165 5431 438 83 0 0 chr5 121384185 121384245 -81701287 - MADE1 DNA Mariner -20 60 1 680 303 33 21 chr5 121384499 121384740 -81700792 - MIR SINE MIR -8 254 11 419 0 20 0 chr5 121385001 121385052 -81700480 + (TG)n Simple_repeat Simple_repeat 2 53 0 1634 201 15 50 chr5 121385835 121386239 -81699293 - MLT1B LTR MaLR 0 390 1 220 308 92 39 chr5 121386239 121386358 -81699174 - L2 LINE L2 -8 3264 3136 23 33 0 0 chr5 121387214 121387244 -81698288 + AT_rich Low_complexity Low_complexity 1 30 0 1274 147 71 75 chr5 121387381 121387681 -81697851 + AluJb SINE Alu 23 321 0 676 273 76 25 chr5 121388627 121388865 -81696667 + MIR SINE MIR 13 262 0 486 297 80 59 chr5 121389310 121389549 -81695983 - MLT1K LTR MaLR -341 247 4 402 336 39 92 chr5 121392026 121392437 -81693095 + L2 LINE L2 2834 3222 -50 221 312 75 21 chr5 121393346 121393439 -81692093 - L2 LINE L2 -16 3256 3159 211 291 0 0 chr5 121394402 121394457 -81691075 + L2 LINE L2 3252 3306 -7 378 0 0 0 chr5 121394634 121394676 -81690856 + (TG)n Simple_repeat Simple_repeat 1 42 0 267 263 17 17 chr5 121395692 121395810 -81689722 + L1MC4 LINE L1 7925 8042 0 633 239 46 64 chr5 121396539 121396757 -81688775 + MER58C DNA MER1_type 2 215 0 470 341 6 0 chr5 121396763 121396936 -81688596 - MIR SINE MIR -42 220 47 2232 177 10 7 chr5 121396936 121397349 -81688183 - MLT2D LTR ERVL 0 414 1 1678 174 21 3 chr5 121397639 121397973 -81687559 + Tigger2 DNA MER2_type 1 340 -2378 * 1705 143 10 0 chr5 121397967 121398261 -81687271 + Tigger2 DNA MER2_type 2422 2718 0 21 36 0 0 chr5 121398458 121398486 -81687046 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 121398521 121398550 -81686982 + AT_rich Low_complexity Low_complexity 1 29 0 2258 75 8 0 chr5 121398630 121399109 -81686423 - L1PA7 LINE L1 0 6154 5586 3950 76 17 0 chr5 121399110 121400069 -81685463 - L1PA7 LINE L1 -329 6140 5169 1106 72 26 0 chr5 121400092 121400245 -81685287 + MER11A LTR ERVK 1110 1266 0 3987 71 0 2 chr5 121400246 121400794 -81684738 - L1PA7 LINE L1 -5135 1326 780 198 0 0 0 chr5 121401327 121401349 -81684183 + (T)n Simple_repeat Simple_repeat 1 22 0 278 208 146 85 chr5 121402472 121402602 -81682930 - L2 LINE L2 -1 3312 3175 2229 135 14 6 chr5 121402611 121402973 -81682559 + MER47A DNA MER2_type 2 366 0 916 164 12 0 chr5 121402987 121403152 -81682380 - MLT1A1 LTR MaLR 0 365 199 180 0 0 0 chr5 121403242 121403262 -81682270 + (TA)n Simple_repeat Simple_repeat 2 21 0 234 278 0 0 chr5 121403262 121403352 -81682180 - L1MC4 LINE L1 -1339 6703 6614 216 158 0 0 chr5 121403357 121403395 -81682137 + (TA)n Simple_repeat Simple_repeat 1 38 0 1975 60 0 12 chr5 121403400 121403650 -81681882 - L1PA7 LINE L1 -18 6136 5890 824 185 0 0 chr5 121403652 121403803 -81681729 - MLT1A1 LTR MaLR -214 151 1 1114 254 86 21 chr5 121404305 121404770 -81680762 - L1ME3A LINE L1 -105 6065 5571 994 301 30 14 chr5 121404764 121405272 -81680260 - L1ME3A LINE L1 -983 5163 4648 * 613 262 56 56 chr5 121405316 121405831 -81679701 - L1ME3A LINE L1 -1595 4551 4037 769 315 131 50 chr5 121407352 121408152 -81677380 + L2 LINE L2 1234 2098 -1216 6616 50 0 0 chr5 121408180 121408995 -81676537 + L1PA5 LINE L1 5340 6154 0 4809 157 36 12 chr5 121409032 121409598 -81675934 + L1PA16 LINE L1 4906 5457 -709 2187 132 0 0 chr5 121409598 121409901 -81675631 + AluSg SINE Alu 1 303 -7 4809 157 36 12 chr5 121409901 121410559 -81674973 + L1PA16 LINE L1 5457 6146 -20 30 0 0 0 chr5 121410582 121410612 -81674920 + AT_rich Low_complexity Low_complexity 1 30 0 378 340 19 6 chr5 121411071 121411227 -81674305 + L1ME3A LINE L1 4552 4709 -1437 611 140 0 9 chr5 121411232 121411339 -81674193 - MSTB2 LTR MaLR -18 439 334 990 152 71 43 chr5 121411351 121411562 -81673970 - MSTB2 LTR MaLR -240 217 1 245 284 74 20 chr5 121411575 121411723 -81673809 + L1ME3A LINE L1 4715 4870 -1276 310 304 87 1 chr5 121412223 121412434 -81673098 + L1ME3A LINE L1 4862 5090 -1056 1972 237 17 68 chr5 121412455 121413148 -81672384 + L1PA12 LINE L1 2 659 -6922 465 284 21 63 chr5 121413217 121413550 -81671982 + L1PA12 LINE L1 1698 2079 -5502 13446 209 24 58 chr5 121413566 121415188 -81670344 + L1PA15 LINE L1 1669 3345 -4239 2221 67 40 13 chr5 121415188 121415488 -81670044 - AluY SINE Alu -2 309 2 13446 209 24 58 chr5 121415488 121417569 -81667963 + L1PA15 LINE L1 3345 5142 -2442 2263 106 0 10 chr5 121417569 121417881 -81667651 + AluY SINE Alu 1 309 -2 13446 209 24 58 chr5 121417881 121419436 -81666096 + L1PA15 LINE L1 5142 6749 -835 942 92 55 31 chr5 121419436 121419599 -81665933 + MSTA LTR MaLR 1 167 -261 * 991 135 19 0 chr5 121419575 121419731 -81665801 + MSTA LTR MaLR 270 428 0 5256 126 14 0 chr5 121419731 121420575 -81664957 + L1PA15 LINE L1 6745 7600 -3 366 291 19 14 chr5 121420598 121420808 -81664724 + L1ME3A LINE L1 5119 5329 -817 2416 159 29 5 chr5 121421126 121421542 -81663990 + MSTB LTR MaLR 1 426 0 762 137 114 2 chr5 121421986 121422243 -81663289 + L1M1 LINE L1 5157 5445 -743 619 324 104 25 chr5 121422243 121422957 -81662575 - L2 LINE L2 -6 3307 2531 333 307 104 26 chr5 121423864 121424056 -81661476 - L2 LINE L2 -225 3047 2841 199 362 35 0 chr5 121424176 121424317 -81661215 - L2 LINE L2 -1121 2193 2048 406 276 46 79 chr5 121424507 121424811 -81660721 + MLT1J1 LTR MaLR 1 294 -152 846 241 121 55 chr5 121424851 121425429 -81660103 - L1MCa LINE L1 -4772 2169 1554 1223 274 32 19 chr5 121425467 121425635 -81659897 - L1MCa LINE L1 -5155 1268 1104 1988 144 7 3 chr5 121425635 121425927 -81659605 + AluSx SINE Alu 1 293 -19 1223 274 32 19 chr5 121425927 121426225 -81659307 - L1MCa LINE L1 -5319 1104 796 600 306 27 51 chr5 121426229 121426565 -81658967 + MLT1I LTR MaLR 82 409 0 240 315 24 8 chr5 121426774 121426901 -81658631 + L1ME3A LINE L1 5544 5672 -498 314 257 30 0 chr5 121426933 121427034 -81658498 + L1ME3A LINE L1 5773 5876 -294 376 310 138 68 chr5 121427919 121428345 -81657187 + L2 LINE L2 2812 3267 -5 406 333 90 7 chr5 121428559 121428703 -81656829 + L2 LINE L2 3117 3272 0 1530 206 32 19 chr5 121431704 121432073 -81653459 - MLT1C LTR MaLR 0 467 94 235 255 80 96 chr5 121432250 121432501 -81653031 - MLT1L LTR MaLR 0 526 265 1929 123 11 4 chr5 121432726 121433003 -81652529 - AluSx SINE Alu -30 282 4 289 253 0 0 chr5 121433108 121433183 -81652349 - L1ME LINE L1 -309 5812 5738 273 311 124 53 chr5 121434964 121435114 -81650418 - L2 LINE L2 -5 3267 3096 285 98 0 0 chr5 121435114 121435155 -81650377 + (TG)n Simple_repeat Simple_repeat 1 41 0 273 311 124 53 chr5 121435155 121435213 -81650319 - L2 LINE L2 -176 3096 3044 1465 192 7 110 chr5 121435254 121435671 -81649861 - MLT1A2 LTR MaLR 0 374 1 375 229 0 36 chr5 121435892 121435975 -81649557 + MIR3 SINE MIR 100 179 -29 304 260 39 0 chr5 121435975 121436052 -81649480 + CT-rich Low_complexity Low_complexity 2 81 0 2140 86 4 0 chr5 121436063 121436343 -81649189 + L1PA11 LINE L1 5886 6166 -8 722 193 12 12 chr5 121436468 121436639 -81648893 - MLT1C LTR MaLR -221 246 76 4261 128 40 39 chr5 121437050 121437873 -81647659 + L1PA16 LINE L1 5334 6157 -9 25 31 0 0 chr5 121437873 121437905 -81647627 + AT_rich Low_complexity Low_complexity 1 32 0 318 107 0 0 chr5 121438850 121438906 -81646626 + (CA)n Simple_repeat Simple_repeat 2 57 0 266 263 0 25 chr5 121439042 121439122 -81646410 - MIR SINE MIR -1 261 184 3067 140 30 9 chr5 121439785 121440343 -81645189 - L1PA11 LINE L1 0 6174 5605 444 306 17 40 chr5 121441503 121441676 -81643856 - MER5B DNA MER1_type -6 172 4 29 28 0 0 chr5 121441799 121441835 -81643697 + AT_rich Low_complexity Low_complexity 1 36 0 685 284 49 9 chr5 121441860 121442085 -81643447 + MIR SINE MIR 12 245 -17 209 376 32 0 chr5 121442176 121442269 -81643263 - L2 LINE L2 0 3313 3218 253 331 92 37 chr5 121443135 121443298 -81642234 - L3 LINE CR1 -986 591 420 553 232 95 18 chr5 121444597 121444765 -81640767 + MIR SINE MIR 7 187 -75 188 135 27 0 chr5 121444779 121444816 -81640716 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1739 175 61 9 chr5 121445161 121445487 -81640045 - MER61A LTR ERV1 0 343 1 412 267 0 20 chr5 121445861 121445962 -81639570 + MER5A DNA MER1_type 11 109 -80 324 0 0 0 chr5 121446958 121446994 -81638538 + (CA)n Simple_repeat Simple_repeat 2 37 0 3956 95 6 6 chr5 121447242 121447791 -81637741 + MER41A LTR ERV1 5 553 -1 376 200 133 0 chr5 121447818 121447893 -81637639 + MIR3 SINE MIR 72 156 -52 282 255 84 74 chr5 121448005 121448173 -81637359 + MIR SINE MIR 11 181 -62 246 294 185 8 chr5 121448334 121448453 -81637079 + MER5B DNA MER1_type 39 178 0 2255 87 23 0 chr5 121449125 121449424 -81636108 + AluY SINE Alu 1 306 -5 717 53 0 0 chr5 121449810 121449904 -81635628 + (GA)n Simple_repeat Simple_repeat 1 94 0 336 102 0 0 chr5 121450429 121450478 -81635054 + (TG)n Simple_repeat Simple_repeat 1 49 0 376 291 68 32 chr5 121450497 121450748 -81634784 - L1MC4a LINE L1 -1868 5940 5681 269 263 149 18 chr5 121451736 121451850 -81633682 - MLT1K LTR MaLR -203 385 257 232 351 63 0 chr5 121451943 121452054 -81633478 + MIR3 SINE MIR 70 187 -21 280 327 82 0 chr5 121453560 121453670 -81631862 - L2 LINE L2 -11 3302 3184 947 229 90 66 chr5 121453754 121454220 -81631312 - MLT1E LTR MaLR 0 654 53 2858 250 52 8 chr5 121454239 121455080 -81630452 + ERVL LTR ERVL 4474 5351 -413 37 23 0 0 chr5 121455095 121455139 -81630393 + AT_rich Low_complexity Low_complexity 1 44 0 2061 194 45 13 chr5 121455211 121455660 -81629872 - MLT1D LTR MaLR -11 494 32 1005 313 55 30 chr5 121455967 121456437 -81629095 + MLT2F LTR ERVL 17 498 -165 1906 143 61 0 chr5 121456509 121456837 -81628695 + MER7A DNA MER2_type 1 346 0 355 200 0 13 chr5 121457299 121457374 -81628158 + MER20 DNA MER1_type 16 89 -130 2394 207 20 6 chr5 121457374 121457867 -81627665 - MLT1D LTR MaLR 0 505 6 566 202 24 0 chr5 121457872 121457996 -81627536 + MER20 DNA MER1_type 89 215 -4 305 215 65 9 chr5 121458460 121458567 -81626965 - L1MA9 LINE L1 -38 6274 6162 13191 174 34 7 chr5 121458671 121463367 -81622165 - L1MA2 LINE L1 -32 7691 2886 5172 197 26 16 chr5 121463366 121463751 -81621781 - L1MA2 LINE L1 -6421 1144 764 * 2611 117 3 5 chr5 121463751 121464127 -81621405 + THE1C LTR MaLR 1 375 0 5172 197 26 16 chr5 121464127 121464860 -81620672 - L1MA2 LINE L1 -6801 764 15 24 32 0 0 chr5 121465025 121465056 -81620476 + AT_rich Low_complexity Low_complexity 1 31 0 15452 137 8 6 chr5 121465069 121468456 -81617076 - L1PA10 LINE L1 -11 6472 3075 10179 102 5 1 chr5 121468472 121470737 -81614795 - L1PA7 LINE L1 0 6154 3880 14311 153 114 44 chr5 121470737 121472096 -81613436 - L1P3 LINE L1 -1053 5408 4145 7584 106 13 3 chr5 121472096 121474002 -81611530 - L1PA7 LINE L1 0 6154 4220 14311 153 114 44 chr5 121474002 121477564 -81607968 - L1P3 LINE L1 -2316 4145 8 8186 206 16 46 chr5 121477572 121480296 -81605236 - L1PA10 LINE L1 -3371 3090 383 2504 211 23 7 chr5 121480291 121480851 -81604681 - L1PA10 LINE L1 -5305 570 2 * 1282 36 0 6 chr5 121481280 121481446 -81604086 - L1PA6 LINE L1 -282 5872 5708 1567 83 5 0 chr5 121481446 121481655 -81603877 + L1PA6 LINE L1 5935 6153 -1 1865 255 72 5 chr5 121483158 121483910 -81601622 - L1M4 LINE L1 -864 5282 4481 5999 146 52 46 chr5 121484568 121488254 -81597278 - L1PA11 LINE L1 0 6174 2136 661 136 36 9 chr5 121488254 121488364 -81597168 - AluSg/x SINE Alu -21 291 179 5999 146 52 46 chr5 121488364 121489226 -81596306 - L1PA11 LINE L1 -4038 2136 1280 1938 141 56 31 chr5 121489294 121489649 -81595883 + THE1B LTR MaLR 1 364 0 303 345 123 6 chr5 121490384 121490726 -81594806 + L1ME LINE L1 5362 5741 -380 578 271 165 22 chr5 121490794 121491067 -81594465 + MLT1J2 LTR MaLR 139 450 0 25 0 0 0 chr5 121491355 121491380 -81594152 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 121493921 121493950 -81591582 + AT_rich Low_complexity Low_complexity 1 29 0 239 380 76 45 chr5 121494366 121494721 -81590811 + L2 LINE L2 2885 3250 -22 344 289 158 0 chr5 121494982 121495096 -81590436 + L2 LINE L2 3137 3268 -4 256 330 51 45 chr5 121495560 121495736 -81589796 + MIR SINE MIR 16 192 -70 404 349 40 0 chr5 121496212 121496338 -81589194 - L2 LINE L2 -5 3267 3137 2927 176 44 40 chr5 121496354 121496590 -81588942 - MER67C LTR ERV1 0 710 477 2207 98 0 3 chr5 121496590 121496911 -81588621 + AluSq SINE Alu 3 322 0 2927 176 44 40 chr5 121496911 121497352 -81588180 - MER67C LTR ERV1 -233 477 27 312 205 26 26 chr5 121497647 121497725 -81587807 + L2 LINE L2 3193 3270 -2 218 287 61 78 chr5 121498904 121499019 -81586513 + MIR SINE MIR 31 143 -65 21 0 0 0 chr5 121499517 121499538 -81585994 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 121500193 121500214 -81585318 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 121501708 121501744 -81583788 + AT_rich Low_complexity Low_complexity 1 36 0 240 163 0 0 chr5 121501908 121501951 -81583581 + (ATGGTG)n Simple_repeat Simple_repeat 5 47 0 869 309 23 4 chr5 121501955 121502211 -81583321 - MIR SINE MIR -1 261 1 207 279 73 44 chr5 121502977 121503045 -81582487 - L2 LINE L2 -24 3248 3179 196 217 0 50 chr5 121503502 121503562 -81581970 - L2 LINE L2 0 3313 3257 208 383 44 22 chr5 121503584 121503767 -81581765 + MIR3 SINE MIR 13 199 -9 838 178 52 100 chr5 121503800 121504030 -81581502 + MER20 DNA MER1_type 1 219 0 26 0 0 0 chr5 121504889 121504915 -81580617 + AT_rich Low_complexity Low_complexity 1 26 0 2313 180 34 5 chr5 121505341 121505753 -81579779 + MSTB LTR MaLR 2 425 -1 248 109 0 22 chr5 121506011 121506057 -81579475 + (TC)n Simple_repeat Simple_repeat 2 46 0 206 429 29 0 chr5 121506235 121506340 -81579192 + MIR SINE MIR 40 147 -61 465 329 30 17 chr5 121509497 121509731 -81575801 + MER115 DNA AcHobo 10 246 -447 346 218 186 8 chr5 121510732 121510856 -81574676 - L1ME LINE L1 -458 5663 5518 21062 183 24 24 chr5 121511015 121512294 -81573238 - L1PA13 LINE L1 -2 6476 5198 1872 133 3 50 chr5 121512294 121512596 -81572936 - AluSx SINE Alu -4 308 21 21062 183 24 24 chr5 121512596 121517776 -81567756 - L1PA13 LINE L1 -1280 5198 10 6450 199 20 9 chr5 121517786 121519764 -81565768 - L1PA13 LINE L1 -3625 3172 1171 2146 108 20 3 chr5 121521297 121521594 -81563938 + AluY SINE Alu 1 302 -9 533 301 69 9 chr5 121521594 121521810 -81563722 + LTR33 LTR ERVL 12 240 -281 1357 198 17 0 chr5 121522237 121522535 -81562997 - L1MB1 LINE L1 -2500 3646 3344 * 2114 188 28 2 chr5 121522534 121522971 -81562561 + L1MB1 LINE L1 3645 4092 -2054 * 2608 185 49 7 chr5 121522970 121523910 -81561622 + L1MB1 LINE L1 4792 5778 -390 1942 104 0 15 chr5 121523910 121524178 -81561354 + AluSc SINE Alu 38 301 -8 418 241 14 14 chr5 121524207 121524352 -81561180 + (CATATA)n Simple_repeat Simple_repeat 2 146 0 426 343 11 28 chr5 121524388 121524569 -81560963 + (CATG)n Simple_repeat Simple_repeat 1 178 0 1842 155 44 17 chr5 121524591 121524952 -81560580 + L1MB1 LINE L1 5795 6165 -3 719 242 0 56 chr5 121525014 121525266 -81560266 + L1MC4 LINE L1 7693 7930 -112 255 367 28 24 chr5 121525515 121525763 -81559769 + ERVL LTR ERVL 1087 1335 -4429 811 330 19 7 chr5 121526031 121526582 -81558950 + ERVL LTR ERVL 1617 2237 -3527 * 1262 333 59 12 chr5 121526578 121527220 -81558312 + ERVL LTR ERVL 3661 4332 -1432 448 326 58 41 chr5 121527777 121528120 -81557412 + ERVL LTR ERVL 4975 5323 -441 402 256 108 0 chr5 121528391 121528520 -81557012 + LTR33 LTR ERVL 3 145 -376 225 0 0 0 chr5 121528775 121528800 -81556732 + (A)n Simple_repeat Simple_repeat 1 25 0 212 309 96 11 chr5 121528960 121529054 -81556478 - MIR3 SINE MIR -18 190 89 209 375 80 0 chr5 121529339 121529427 -81556105 + L2 LINE L2 3158 3252 -20 363 270 0 10 chr5 121530685 121530785 -81554747 + L1MC4 LINE L1 6609 6707 -1335 * 369 219 15 164 chr5 121530725 121530926 -81554606 - L1MC4 LINE L1 -1339 6703 6533 256 294 24 71 chr5 121531883 121532009 -81553523 - L2 LINE L2 0 3272 3153 48 53 0 0 chr5 121532156 121532232 -81553300 + AT_rich Low_complexity Low_complexity 1 76 0 197 266 128 11 chr5 121532829 121532923 -81552609 - MIR SINE MIR -48 214 110 237 337 116 23 chr5 121533288 121533460 -81552072 - MIR SINE MIR -28 234 47 308 301 150 0 chr5 121534093 121534246 -81551286 - MIR SINE MIR 0 262 87 23 33 0 0 chr5 121535760 121535790 -81549742 + AT_rich Low_complexity Low_complexity 1 30 0 428 309 169 20 chr5 121535957 121536414 -81549118 + L2 LINE L2 2087 2611 -703 1673 215 31 12 chr5 121536415 121536833 -81548699 - L1MD3 LINE L1 0 7995 7570 282 379 36 23 chr5 121536840 121537059 -81548473 + L2 LINE L2 2599 2820 -494 307 274 7 67 chr5 121537147 121537282 -81548250 - MIR SINE MIR -79 183 57 447 19 0 0 chr5 121638650 121638702 -81446830 + (CA)n Simple_repeat Simple_repeat 1 52 0 373 21 0 21 chr5 121638953 121639001 -81446531 + (TG)n Simple_repeat Simple_repeat 2 48 0 398 179 71 136 chr5 121640131 121640271 -81445261 + FLAM_A SINE Alu 1 131 -2 256 231 139 37 chr5 121640392 121640500 -81445032 - FLAM_C SINE Alu -8 125 7 268 189 163 13 chr5 121641139 121641231 -81444301 + AluSg SINE Alu 1 90 -210 435 295 85 40 chr5 121644403 121644603 -81440929 + MIR SINE MIR 6 214 -48 384 22 0 0 chr5 121644619 121644664 -81440868 + (TG)n Simple_repeat Simple_repeat 2 46 0 332 73 36 0 chr5 121645759 121645814 -81439718 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 573 42 0 0 chr5 121647595 121647667 -81437865 + (TC)n Simple_repeat Simple_repeat 1 72 0 531 170 0 0 chr5 121648317 121648417 -81437115 + CT-rich Low_complexity Low_complexity 3 102 0 180 354 62 10 chr5 121648430 121648526 -81437006 - L2 LINE L2 -76 3196 3096 361 291 27 61 chr5 121648569 121648717 -81436815 - MER5B DNA MER1_type -2 176 34 231 250 0 0 chr5 121649006 121649058 -81436474 + Tigger3(Golem) DNA MER2_type 2846 2897 -132 351 0 0 0 chr5 121649494 121649533 -81435999 + (CA)n Simple_repeat Simple_repeat 2 40 0 246 174 0 0 chr5 121649533 121649579 -81435953 + GA-rich Low_complexity Low_complexity 1 46 0 180 0 0 0 chr5 121652086 121652106 -81433426 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 295 244 96 19 chr5 121653442 121653571 -81431961 + AluJ/FLAM SINE Alu 2 95 -207 546 29 0 0 chr5 121657041 121657109 -81428423 + (TG)n Simple_repeat Simple_repeat 1 68 0 290 260 140 0 chr5 121657313 121657413 -81428119 + FLAM_A SINE Alu 8 121 -12 237 245 0 0 chr5 121661444 121661461 -81424071 + A-rich Low_complexity Low_complexity 1 17 -36 392 185 20 146 chr5 121661461 121661612 -81423920 + FLAM_C SINE Alu 2 133 0 237 245 0 0 chr5 121661612 121661647 -81423885 + A-rich Low_complexity Low_complexity 16 53 0 213 39 0 0 chr5 121661964 121661990 -81423542 + (TCC)n Simple_repeat Simple_repeat 2 27 0 207 191 118 88 chr5 121663961 121664029 -81421503 + MIR SINE MIR 13 82 -180 666 0 0 0 chr5 121664085 121664159 -81421373 + (GAA)n Simple_repeat Simple_repeat 2 75 0 284 352 0 0 chr5 121664343 121664451 -81421081 + (TAGA)n Simple_repeat Simple_repeat 1 108 0 706 220 10 3 chr5 121664453 121664753 -81420779 + (TGGA)n Simple_repeat Simple_repeat 1 302 0 378 91 0 0 chr5 121665689 121665744 -81419788 + (CA)n Simple_repeat Simple_repeat 2 56 0 729 122 0 0 chr5 121666238 121666385 -81419147 + (TCCA)n Simple_repeat Simple_repeat 4 150 0 401 0 0 20 chr5 121666721 121666771 -81418761 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 243 309 82 0 chr5 121667049 121667146 -81418386 - FLAM_C SINE Alu -27 106 2 1139 84 0 6 chr5 121667491 121667657 -81417875 + (GAAA)n Simple_repeat Simple_repeat 2 166 0 288 77 0 0 chr5 121667826 121667865 -81417667 + (ATG)n Simple_repeat Simple_repeat 1 39 0 285 228 0 0 chr5 121668080 121668159 -81417373 + (ATG)n Simple_repeat Simple_repeat 2 80 0 519 95 0 0 chr5 121669669 121669743 -81415789 + (TG)n Simple_repeat Simple_repeat 2 75 0 689 41 0 69 chr5 121669964 121670109 -81415423 + (TTC)n Simple_repeat Simple_repeat 1 135 0 31 26 0 0 chr5 121670261 121670299 -81415233 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr5 121672244 121672275 -81413257 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr5 121673836 121673860 -81411672 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 201 243 0 0 chr5 121674719 121674789 -81410743 + (CA)n Simple_repeat Simple_repeat 1 70 0 261 57 0 0 chr5 121675192 121675227 -81410305 + (GA)n Simple_repeat Simple_repeat 2 36 0 232 258 15 15 chr5 121675817 121675883 -81409649 - tRNA-Ala-GCG tRNA tRNA -7 68 3 233 244 12 70 chr5 121677402 121677488 -81408044 - MSTD LTR MaLR 0 396 316 431 262 48 0 chr5 121678794 121678920 -81406612 - MLT1D LTR MaLR -362 143 12 423 0 0 0 chr5 121679362 121679409 -81406123 + (CA)n Simple_repeat Simple_repeat 1 47 0 21 36 0 0 chr5 121680018 121680046 -81405486 + AT_rich Low_complexity Low_complexity 1 28 0 230 216 20 0 chr5 121680238 121680289 -81405243 + PMER1 DNA MER1_type 1 52 -38 633 27 0 0 chr5 121681485 121681560 -81403972 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 233 237 0 17 chr5 121681702 121681761 -81403771 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 24 32 0 0 chr5 121681847 121681878 -81403654 + AT_rich Low_complexity Low_complexity 1 31 0 230 160 40 0 chr5 121682215 121682265 -81403267 + Alu SINE Alu 2 53 -247 303 28 0 0 chr5 121683166 121683202 -81402330 + (GA)n Simple_repeat Simple_repeat 2 37 0 198 71 0 0 chr5 121683798 121683826 -81401706 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 257 239 38 42 chr5 121683873 121683969 -81401563 - AluSg SINE Alu -197 103 12 225 224 0 0 chr5 121686650 121686708 -81398824 + CT-rich Low_complexity Low_complexity 2 59 0 356 59 20 0 chr5 121687082 121687133 -81398399 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 493 158 139 0 chr5 121688483 121688584 -81396948 - AluSq/x SINE Alu -198 115 1 371 250 67 17 chr5 121688643 121688763 -81396769 - MER3 DNA MER1_type -14 195 70 186 128 0 0 chr5 121691085 121691124 -81394408 + (T)n Simple_repeat Simple_repeat 1 39 0 256 203 0 17 chr5 121691233 121691292 -81394240 - tRNA-Lys-AAA tRNA tRNA -13 63 6 25 51 0 0 chr5 121691305 121691344 -81394188 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr5 121691509 121691549 -81393983 + AT_rich Low_complexity Low_complexity 1 40 0 193 367 17 0 chr5 121694041 121694101 -81391431 + L2 LINE L2 3253 3313 0 209 250 13 0 chr5 121694101 121694177 -81391355 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 344 22 0 22 chr5 121694231 121694277 -81391255 + (TG)n Simple_repeat Simple_repeat 2 46 0 221 339 0 0 chr5 121695097 121695162 -81390370 + (TG)n Simple_repeat Simple_repeat 2 66 0 215 274 65 48 chr5 121696629 121696753 -81388779 - MIR3 SINE MIR -80 128 3 283 243 154 29 chr5 121697410 121697546 -81387986 + AluJb SINE Alu 138 290 -12 228 368 24 24 chr5 121697681 121697806 -81387726 + MIR SINE MIR 22 146 -62 399 360 0 0 chr5 121700514 121700692 -81384840 + (TG)n Simple_repeat Simple_repeat 1 178 0 321 125 0 0 chr5 121701029 121701077 -81384455 + PMER1 DNA MER1_type 6 53 -37 306 0 0 0 chr5 121701521 121701555 -81383977 + (CA)n Simple_repeat Simple_repeat 2 35 0 237 313 0 0 chr5 121701798 121701862 -81383670 - tRNA-Ala-GCG tRNA tRNA -11 64 1 205 313 17 61 chr5 121701856 121701971 -81383561 - MIR SINE MIR -58 150 41 * 187 209 244 61 chr5 121702066 121702181 -81383351 - MIR SINE MIR -44 218 83 663 161 0 0 chr5 121703371 121703489 -81382043 + (TG)n Simple_repeat Simple_repeat 1 118 0 252 212 0 0 chr5 121703529 121703595 -81381937 + (TG)n Simple_repeat Simple_repeat 1 66 0 297 262 72 12 chr5 121705393 121705507 -81380025 + AluSq/x SINE Alu 3 105 -198 325 279 106 0 chr5 121705667 121705771 -81379761 + AluJo SINE Alu 2 116 -186 269 140 60 0 chr5 121706657 121706707 -81378825 - FLAM_A SINE Alu -7 126 74 229 269 180 36 chr5 121709258 121709425 -81376107 + AluJo SINE Alu 108 298 -4 258 241 0 0 chr5 121709462 121709516 -81376016 + tRNA-Ala-GCG tRNA tRNA 1 54 -21 549 147 127 47 chr5 121709544 121709694 -81375838 - FRAM SINE Alu -14 162 1 300 111 0 0 chr5 121709743 121709788 -81375744 + (CAG)n Simple_repeat Simple_repeat 1 45 0 277 299 118 7 chr5 121709913 121710057 -81375475 - FRAM SINE Alu -10 156 1 231 36 0 0 chr5 121710268 121710296 -81375236 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 232 250 33 33 chr5 121710408 121710500 -81375032 + MIR SINE MIR 80 171 -91 432 0 0 0 chr5 121711883 121711931 -81373601 + (CA)n Simple_repeat Simple_repeat 2 49 0 197 204 0 37 chr5 121713256 121713310 -81372222 - MIR SINE MIR -100 162 111 273 238 16 0 chr5 121713739 121713802 -81371730 - MERVL LTR ERVL -968 4517 4454 461 71 64 36 chr5 121715459 121715599 -81369933 + (GTGTG)n Simple_repeat Simple_repeat 3 146 0 783 66 0 0 chr5 121719105 121719211 -81366321 + (CA)n Simple_repeat Simple_repeat 2 107 0 603 206 0 0 chr5 121720060 121720235 -81365297 + (TG)n Simple_repeat Simple_repeat 2 176 0 225 208 0 0 chr5 121720254 121720331 -81365201 + (TG)n Simple_repeat Simple_repeat 2 78 0 324 306 98 0 chr5 121720337 121720510 -81365022 + Tigger3(Golem) DNA MER2_type 145 334 -2695 631 152 5 38 chr5 121720629 121720813 -81364719 + (TG)n Simple_repeat Simple_repeat 1 178 0 252 0 0 0 chr5 121720879 121720907 -81364625 + (TG)n Simple_repeat Simple_repeat 1 28 0 470 17 17 0 chr5 121721148 121721207 -81364325 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 238 321 134 0 chr5 121721210 121721344 -81364188 - FRAM SINE Alu -14 152 1 341 253 0 0 chr5 121721645 121721720 -81363812 + MIR SINE MIR 71 145 -117 306 125 0 0 chr5 121721760 121721808 -81363724 + (A)n Simple_repeat Simple_repeat 1 48 0 900 141 0 0 chr5 121722474 121722623 -81362909 + (TTCC)n Simple_repeat Simple_repeat 1 149 0 609 52 0 0 chr5 121722801 121722878 -81362654 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 285 29 0 0 chr5 121723507 121723541 -81361991 + (CA)n Simple_repeat Simple_repeat 2 35 0 244 250 0 48 chr5 121723596 121723680 -81361852 + MLT2C1 LTR ERVL 300 379 -18 354 207 92 11 chr5 121724549 121724636 -81360896 + AluS SINE Alu 2 95 -208 630 49 0 0 chr5 121724688 121724770 -81360762 + (CAAAC)n Simple_repeat Simple_repeat 2 83 0 243 0 0 0 chr5 121725793 121725820 -81359712 + (TG)n Simple_repeat Simple_repeat 1 27 0 * 312 27 0 0 chr5 121725819 121725856 -81359676 + (GA)n Simple_repeat Simple_repeat 1 37 0 25 31 0 0 chr5 121726614 121726646 -81358886 + AT_rich Low_complexity Low_complexity 1 32 0 213 319 25 17 chr5 121729627 121729746 -81355786 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 202 319 14 0 chr5 121730063 121730132 -81355400 + (TG)n Simple_repeat Simple_repeat 1 70 0 456 111 0 0 chr5 121730403 121730475 -81355057 + (CA)n Simple_repeat Simple_repeat 1 72 0 437 150 18 0 chr5 121730488 121730601 -81354931 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 684 93 0 0 chr5 121730732 121730755 -81354777 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 684 93 0 0 chr5 121730755 121730852 -81354680 + (TTTC)n Simple_repeat Simple_repeat 1 97 0 1229 88 0 11 chr5 121730876 121731058 -81354474 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 206 137 20 59 chr5 121731403 121731454 -81354078 + CT-rich Low_complexity Low_complexity 1 49 0 375 41 0 0 chr5 121731960 121732009 -81353523 + (TG)n Simple_repeat Simple_repeat 2 50 0 218 303 0 40 chr5 121732251 121732327 -81353205 + CT-rich Low_complexity Low_complexity 6 78 0 22 35 0 0 chr5 121732328 121732357 -81353175 + AT_rich Low_complexity Low_complexity 1 29 0 1100 87 0 22 chr5 121732704 121732888 -81352644 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 755 121 0 8 chr5 121735130 121735262 -81350270 + (GTTTG)n Simple_repeat Simple_repeat 5 135 0 251 120 80 0 chr5 121735338 121735388 -81350144 - AluSp SINE Alu -106 197 144 366 289 96 19 chr5 121735476 121735632 -81349900 - FRAM SINE Alu -2 164 1 250 314 0 0 chr5 121735632 121735702 -81349830 - tRNA-Ala-GCG tRNA tRNA -5 70 1 463 307 28 34 chr5 121736686 121736862 -81348670 + MER5B DNA MER1_type 2 176 -2 417 70 0 0 chr5 121737344 121737401 -81348131 + (CA)n Simple_repeat Simple_repeat 1 57 0 261 83 0 0 chr5 121739710 121739746 -81345786 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 298 212 142 0 chr5 121739809 121739922 -81345610 + Tigger7 DNA MER2_type 2277 2405 -82 216 0 0 0 chr5 121739925 121739949 -81345583 + (TG)n Simple_repeat Simple_repeat 1 24 0 300 102 0 0 chr5 121741897 121741946 -81343586 + (TG)n Simple_repeat Simple_repeat 2 50 0 510 208 0 0 chr5 121743128 121743387 -81342145 + (CA)n Simple_repeat Simple_repeat 1 259 0 274 280 97 0 chr5 121744013 121744106 -81341426 - AluSq/x SINE Alu -200 103 2 24 53 0 0 chr5 121745448 121745486 -81340046 + AT_rich Low_complexity Low_complexity 1 38 0 40 0 0 0 chr5 121746080 121746120 -81339412 + AT_rich Low_complexity Low_complexity 1 40 0 194 133 0 44 chr5 121746120 121746165 -81339367 + (CGTG)n Simple_repeat Simple_repeat 4 46 0 382 191 64 0 chr5 121747781 121747875 -81337657 + MSTB LTR MaLR 326 425 -1 309 109 0 0 chr5 121747886 121747932 -81337600 + (GA)n Simple_repeat Simple_repeat 2 47 0 359 290 52 91 chr5 121748651 121748937 -81336595 + L1M4 LINE L1 4367 4641 -1505 308 318 18 0 chr5 121749126 121749236 -81336296 - MER74A LTR ERVL -267 291 180 262 274 38 28 chr5 121750137 121750243 -81335289 + MER104 DNA Tc2 1 107 -73 21 0 0 0 chr5 121750275 121750296 -81335236 + AT_rich Low_complexity Low_complexity 1 21 0 189 229 0 0 chr5 121750309 121750357 -81335175 + (TG)n Simple_repeat Simple_repeat 1 48 0 244 239 173 0 chr5 121750596 121750680 -81334852 + AluY SINE Alu 9 89 -219 489 226 92 18 chr5 121750990 121751154 -81334378 - FRAM SINE Alu -2 174 1 222 150 0 0 chr5 121751459 121751499 -81334033 + (GGA)n Simple_repeat Simple_repeat 1 40 0 252 244 70 0 chr5 121751541 121751627 -81333905 + L1M4 LINE L1 78 169 -6373 336 238 154 49 chr5 121752468 121752611 -81332921 - HAL1 LINE L1 -1312 1195 1038 531 167 0 0 chr5 121753366 121753480 -81332052 + (TG)n Simple_repeat Simple_repeat 1 114 0 493 340 52 4 chr5 121753749 121753999 -81331533 + MER20B DNA MER1_type 178 439 -344 233 202 17 155 chr5 121754695 121754829 -81330703 - FLAM_A SINE Alu -6 127 31 250 197 16 33 chr5 121755517 121755578 -81329954 + AluSg/x SINE Alu 129 188 -112 295 0 0 161 chr5 121755580 121755735 -81329797 + (CAGAG)n Simple_repeat Simple_repeat 5 134 0 * 352 176 0 0 chr5 121755663 121755737 -81329795 + GA-rich Low_complexity Low_complexity 1 74 0 213 39 0 0 chr5 121755819 121755845 -81329687 + (CAA)n Simple_repeat Simple_repeat 2 27 0 238 267 84 53 chr5 121756103 121756234 -81329298 - Tigger5 DNA MER2_type -54 2269 2135 237 279 105 12 chr5 121756311 121756397 -81329135 - AluY SINE Alu -207 94 1 186 43 0 0 chr5 121757196 121757219 -81328313 + (TTG)n Simple_repeat Simple_repeat 1 23 0 24 32 0 0 chr5 121758928 121758959 -81326573 + AT_rich Low_complexity Low_complexity 1 31 0 289 130 0 42 chr5 121760033 121760094 -81325438 - MER4D LTR ERV1 -37 862 687 755 296 46 11 chr5 121763140 121763424 -81322108 - MER21B LTR ERV1 -111 752 459 25 31 0 0 chr5 121763450 121763482 -81322050 + AT_rich Low_complexity Low_complexity 1 32 0 249 217 70 104 chr5 121763841 121763956 -81321576 - FLAM_C SINE Alu -1 132 22 37 16 0 48 chr5 121767120 121767183 -81318349 + AT_rich Low_complexity Low_complexity 1 60 0 246 160 0 0 chr5 121768047 121768097 -81317435 + (TG)n Simple_repeat Simple_repeat 1 50 0 515 210 93 25 chr5 121770079 121770241 -81315291 - FRAM SINE Alu -4 172 1 315 0 0 0 chr5 121770907 121770942 -81314590 + (TG)n Simple_repeat Simple_repeat 1 35 0 714 133 0 0 chr5 121771318 121771468 -81314064 + (CAGG)n Simple_repeat Simple_repeat 2 151 0 423 14 99 43 chr5 121771824 121771965 -81313567 + (TGG)n Simple_repeat Simple_repeat 3 151 0 250 215 0 31 chr5 121772316 121772381 -81313151 - MLT2A2 LTR ERVL 0 453 397 186 117 0 50 chr5 121772384 121772444 -81313088 + (TA)n Simple_repeat Simple_repeat 2 58 0 192 322 0 0 chr5 121775330 121775389 -81310143 + MIR SINE MIR 63 121 -141 221 278 0 0 chr5 121778062 121778116 -81307416 + G-rich Low_complexity Low_complexity 1 54 0 248 159 0 16 chr5 121780596 121780659 -81304873 + (TA)n Simple_repeat Simple_repeat 2 63 0 182 280 0 0 chr5 121780679 121780729 -81304803 + MIR SINE MIR 15 64 -198 215 236 28 42 chr5 121781467 121781539 -81303993 - MIR SINE MIR -122 140 70 206 247 41 14 chr5 121782244 121782317 -81303215 + (CATA)n Simple_repeat Simple_repeat 3 77 0 233 280 108 11 chr5 121782379 121782472 -81303060 - AluY SINE Alu -198 103 2 183 190 0 0 chr5 121784342 121784400 -81301132 + (TGG)n Simple_repeat Simple_repeat 2 59 0 280 167 0 141 chr5 121785138 121785216 -81300316 - PMER1 DNA MER1_type -15 75 9 284 309 39 17 chr5 121785321 121785502 -81300030 + Charlie5 DNA MER1_type 2368 2552 -60 421 246 0 11 chr5 121785660 121786027 -81299505 + (CA)n Simple_repeat Simple_repeat 1 362 0 393 86 0 0 chr5 121786379 121786437 -81299095 + (TG)n Simple_repeat Simple_repeat 2 59 0 198 103 0 0 chr5 121787071 121787100 -81298432 + (CAT)n Simple_repeat Simple_repeat 1 29 0 749 93 31 0 chr5 121787106 121787235 -81298297 + CT-rich Low_complexity Low_complexity 2 134 0 755 118 0 7 chr5 121787952 121788088 -81297444 + (TG)n Simple_repeat Simple_repeat 2 136 0 303 313 0 0 chr5 121789610 121789709 -81295823 + GA-rich Low_complexity Low_complexity 2 100 0 233 127 0 79 chr5 121790209 121790272 -81295260 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 2267 278 14 16 chr5 121790935 121792221 -81293311 - L1MA4 LINE L1 -370 5930 4645 277 164 27 14 chr5 121792401 121792474 -81293058 + GA-rich Low_complexity Low_complexity 3 76 0 191 351 26 0 chr5 121793715 121793792 -81291740 + MIR SINE MIR 68 146 -62 207 0 0 0 chr5 121795182 121795205 -81290327 + (CA)n Simple_repeat Simple_repeat 2 24 0 378 0 0 0 chr5 121798074 121798116 -81287416 + (TG)n Simple_repeat Simple_repeat 2 43 0 200 191 0 24 chr5 121799299 121799341 -81286191 + CT-rich Low_complexity Low_complexity 4 44 0 405 176 110 0 chr5 121799466 121799557 -81285975 + AluSq/x SINE Alu 5 105 -207 198 0 0 0 chr5 121799598 121799620 -81285912 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 183 250 0 0 chr5 121800445 121800497 -81285035 + (CA)n Simple_repeat Simple_repeat 1 52 0 540 0 0 0 chr5 121802146 121802206 -81283326 + (TC)n Simple_repeat Simple_repeat 1 60 0 260 115 49 0 chr5 121802325 121802386 -81283146 + T-rich Low_complexity Low_complexity 2 65 0 428 174 130 68 chr5 121802389 121802550 -81282982 - FRAM SINE Alu -1 175 5 324 209 0 0 chr5 121803064 121803155 -81282377 + (TG)n Simple_repeat Simple_repeat 2 92 0 288 0 0 0 chr5 121804609 121804641 -81280891 + (ATTG)n Simple_repeat Simple_repeat 4 35 0 303 28 0 0 chr5 121805556 121805592 -81279940 + (TG)n Simple_repeat Simple_repeat 2 37 0 417 20 0 0 chr5 121806163 121806213 -81279319 + (TG)n Simple_repeat Simple_repeat 2 51 0 205 290 0 16 chr5 121806512 121806574 -81278958 + G-rich Low_complexity Low_complexity 1 61 0 408 111 0 0 chr5 121807736 121807799 -81277733 + (TG)n Simple_repeat Simple_repeat 2 64 0 228 246 72 0 chr5 121807921 121807990 -81277542 - AluSp SINE Alu -103 200 127 197 244 0 0 chr5 121813626 121813671 -81271861 - L2 LINE L2 -6 3266 3222 263 288 32 49 chr5 121815320 121815443 -81270089 + AluSp SINE Alu 123 197 -106 1071 84 0 0 chr5 121817295 121817541 -81267991 + (TG)n Simple_repeat Simple_repeat 1 246 0 364 288 8 17 chr5 121818721 121818839 -81266693 + Tigger5 DNA MER2_type 3 119 -2204 272 253 38 0 chr5 121819452 121819531 -81266001 + (TATG)n Simple_repeat Simple_repeat 1 82 0 279 203 62 0 chr5 121819634 121819698 -81265834 - AluSg/x SINE Alu -110 192 125 242 275 132 0 chr5 121819927 121820018 -81265514 - AluSc SINE Alu -179 120 18 448 269 0 0 chr5 121820415 121820523 -81265009 + HERVL LTR ERVL 204 311 -5343 207 0 0 0 chr5 121820632 121820655 -81264877 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 275 248 118 65 chr5 121820655 121820800 -81264732 - FRAM SINE Alu -149 153 1 249 143 0 57 chr5 121820946 121821016 -81264516 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 306 224 0 15 chr5 121821136 121821203 -81264329 - L2 LINE L2 -6 3307 3242 261 0 0 0 chr5 121822327 121822356 -81263176 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 302 250 26 0 chr5 121826763 121826839 -81258693 - MSTC LTR MaLR -336 92 15 457 282 38 38 chr5 121827681 121827894 -81257638 - L1MB7 LINE L1 -77 6107 5895 436 324 130 14 chr5 121828053 121828363 -81257169 - L1MB7 LINE L1 -318 5860 5514 236 314 144 33 chr5 121828645 121828798 -81256734 + FRAM SINE Alu 1 166 0 1582 122 17 0 chr5 121929187 121929417 -81156115 + AluSg/x SINE Alu 67 300 -12 452 195 161 8 chr5 121929529 121929647 -81155885 + AluJo SINE Alu 1 136 -176 207 0 0 0 chr5 121929647 121929670 -81155862 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 412 324 135 20 chr5 121929836 121930080 -81155452 + L3 LINE CR1 968 1239 -338 21 0 0 0 chr5 121930356 121930377 -81155155 + AT_rich Low_complexity Low_complexity 1 21 0 585 348 88 16 chr5 121930900 121931288 -81154244 + L2 LINE L2 2895 3310 -3 562 192 10 10 chr5 121932954 121933058 -81152474 - FRAM SINE Alu -78 98 1 221 159 0 0 chr5 121933058 121933102 -81152430 + A-rich Low_complexity Low_complexity 1 44 0 606 167 0 42 chr5 121933110 121933230 -81152302 - FLAM_C SINE Alu -28 115 1 364 278 28 19 chr5 121933341 121933449 -81152083 - MER81 DNA DNA -5 109 1 242 371 132 19 chr5 121933506 121933878 -81151654 - L2 LINE L2 -33 3239 2826 205 331 74 43 chr5 121933932 121934095 -81151437 - L2 LINE L2 -534 2780 2613 255 189 284 0 chr5 121936952 121937026 -81148506 + L2 LINE L2 3214 3308 -5 61 52 0 0 chr5 121937075 121937171 -81148361 + AT_rich Low_complexity Low_complexity 1 96 0 2312 135 11 6 chr5 121937215 121937577 -81147955 + THE1B LTR MaLR 1 364 0 3640 120 111 0 chr5 121937577 121938162 -81147370 + THE1B-int LTR MaLR 1 650 -930 422 315 57 43 chr5 121938191 121938559 -81146973 + L1M4 LINE L1 3111 3483 -2663 719 266 68 32 chr5 121938942 121939194 -81146338 + MIR SINE MIR 1 261 -1 312 361 8 0 chr5 121939743 121939865 -81145667 - MER94 DNA DNA -5 129 7 23 33 0 0 chr5 121941651 121941681 -81143851 + AT_rich Low_complexity Low_complexity 1 30 0 776 241 105 21 chr5 121942514 121942794 -81142738 + MLT1H LTR MaLR 217 604 -22 294 228 50 131 chr5 121942917 121943205 -81142327 - MIR SINE MIR -18 244 13 424 263 53 38 chr5 121943644 121943853 -81141679 - L1ME LINE L1 -700 5466 5255 430 183 29 29 chr5 121943874 121943978 -81141554 - L1MC3 LINE L1 -817 6968 6865 320 304 10 0 chr5 121943976 121944078 -81141454 - L1ME LINE L1 -413 5757 5655 * 251 227 27 13 chr5 121944078 121944153 -81141379 + MER116 DNA Mariner 4 79 -1 820 286 95 23 chr5 121944156 121944268 -81141264 - L1ME LINE L1 -509 5653 5551 2067 199 42 9 chr5 121944268 121944720 -81140812 + MLT1C LTR MaLR 1 467 0 820 286 95 23 chr5 121944720 121945289 -81140243 - L1ME LINE L1 -611 5551 4917 2420 280 55 42 chr5 121945316 121946129 -81139403 + L1PA13 LINE L1 5 828 -5959 * 4195 241 26 34 chr5 121946107 121946554 -81138978 + L1PA13 LINE L1 1269 1718 -5079 2222 176 42 5 chr5 121946554 121946963 -81138569 + MSTA LTR MaLR 1 424 -4 4195 241 26 34 chr5 121946963 121947740 -81137792 + L1PA13 LINE L1 1718 2508 -4289 1446 211 7 3 chr5 121947746 121948035 -81137497 + AluSx SINE Alu 21 310 -2 440 68 23 45 chr5 121948035 121948123 -81137409 + (GGAA)n Simple_repeat Simple_repeat 1 86 0 11724 223 76 7 chr5 121948124 121949901 -81135631 + L1PA13 LINE L1 2495 4571 -2226 3417 71 0 13 chr5 121949901 121950351 -81135181 - MLT2A1 LTR ERVL 0 444 1 11724 223 76 7 chr5 121950351 121951610 -81133922 + L1PA13 LINE L1 4571 5741 -1056 539 256 108 31 chr5 121951753 121952011 -81133521 - L1MDa LINE L1 -3736 2804 2527 396 285 83 54 chr5 121952078 121952355 -81133177 - L1MDa LINE L1 -4237 2484 2200 374 314 84 34 chr5 121952357 121952887 -81132645 - L1MDa LINE L1 -4614 2107 1515 1967 111 4 7 chr5 121952891 121953208 -81132324 + AluSg SINE Alu 3 318 0 567 248 52 33 chr5 121953292 121953502 -81132030 - MER58C DNA MER1_type -1 214 1 481 221 27 86 chr5 121953541 121953763 -81131769 - L1MEc LINE L1 -1485 4730 4522 22 0 0 0 chr5 121953776 121953798 -81131734 + AT_rich Low_complexity Low_complexity 1 22 0 870 282 145 30 chr5 121953962 121954780 -81130752 - L1MEc LINE L1 -1978 4237 3224 1552 205 30 0 chr5 121954780 121955078 -81130454 - AluJo SINE Alu -5 307 1 870 282 145 30 chr5 121955078 121955507 -81130025 - L1MEc LINE L1 -2991 3224 2846 317 242 121 47 chr5 121955516 121955731 -81129801 - L1MEc LINE L1 -3773 2442 2212 30 27 0 0 chr5 121955949 121955986 -81129546 + AT_rich Low_complexity Low_complexity 1 37 0 69 24 0 0 chr5 121956005 121956088 -81129444 + AT_rich Low_complexity Low_complexity 1 83 0 216 286 0 0 chr5 121956124 121956187 -81129345 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 372 307 37 56 chr5 121956221 121956382 -81129150 - L1MEc LINE L1 -4586 1810 1652 2196 126 0 0 chr5 121956382 121956692 -81128840 - AluSx SINE Alu -2 310 1 372 307 37 56 chr5 121956692 121956745 -81128787 - L1MEc LINE L1 -4744 1652 1600 27 29 0 0 chr5 121957279 121957313 -81128219 + AT_rich Low_complexity Low_complexity 1 34 0 192 152 0 0 chr5 121957418 121957451 -81128081 + T-rich Low_complexity Low_complexity 1 33 0 197 202 0 193 chr5 121958988 121959107 -81126425 - MIR SINE MIR 0 262 167 577 290 52 16 chr5 121959261 121959454 -81126078 - MIR SINE MIR -6 256 57 248 325 13 0 chr5 121959517 121959594 -81125938 - MER5A DNA MER1_type -103 86 9 2127 100 1 36 chr5 121961257 121961748 -81123784 - MER51A LTR ERV1 0 634 1 2062 156 3 6 chr5 121961749 121962075 -81123457 - MER51A-int LTR ERV1 0 7816 7492 260 307 75 40 chr5 121962239 121962467 -81123065 - MER51-int LTR ERV1 -1810 4866 4631 1107 327 35 39 chr5 121962547 121963189 -81122343 - MER51-int LTR ERV1 -1951 5805 5279 1466 311 55 51 chr5 121963404 121965120 -81120412 - MER51-int LTR ERV1 -1086 3868 2897 258 174 0 174 chr5 121965620 121965706 -81119826 - MER51-int LTR ERV1 -4958 2027 1957 426 270 24 55 chr5 121966935 121967233 -81118299 - MER51-int LTR ERV1 -3907 973 874 289 121 35 17 chr5 121967501 121967559 -81117973 - MER51-int LTR ERV1 -2513 3433 3375 * 588 174 17 64 chr5 121967537 121967709 -81117823 - MER51-int LTR ERV1 -2394 2621 2458 2070 182 50 69 chr5 121967720 121968362 -81117170 - MER51-int LTR ERV1 -4379 571 42 1600 150 8 0 chr5 121968362 121968602 -81116930 - MER51A LTR ERV1 -392 242 1 249 188 16 0 chr5 121968827 121968891 -81116641 - L1MA8 LINE L1 -2 6289 6225 2579 86 131 0 chr5 121968896 121969292 -81116240 - LTR7 LTR ERV1 -2 448 1 2176 113 81 3 chr5 121969292 121969662 -81115870 - HERVH LTR ERV1 0 7713 7315 896 96 0 7 chr5 121969776 121969912 -81115620 - HERVH LTR ERV1 -1979 5734 5600 4153 159 3 1 chr5 121969913 121970574 -81114958 - HERVH LTR ERV1 -2564 5149 4488 3295 98 14 4 chr5 121970576 121971064 -81114468 - HERVH LTR ERV1 -3720 3993 3501 838 151 20 0 chr5 121971066 121971212 -81114320 - HERVH LTR ERV1 -4425 3288 3140 * 11086 97 9 8 chr5 121971206 121972811 -81112721 - HERVH LTR ERV1 -4726 2987 1382 2177 81 17 0 chr5 121972820 121973115 -81112417 - HERVH LTR ERV1 -7413 300 1 2566 78 134 2 chr5 121973117 121973513 -81112019 - LTR7 LTR ERV1 -2 448 1 3366 134 52 2 chr5 121973513 121974096 -81111436 - L1MA8 LINE L1 -65 6226 5615 2230 113 0 3 chr5 121974902 121975202 -81110330 + AluSx SINE Alu 1 299 -13 211 185 19 19 chr5 121976166 121976220 -81109312 + (TA)n Simple_repeat Simple_repeat 1 54 0 1705 259 57 40 chr5 121977325 121978077 -81107455 - L1MC4a LINE L1 -1741 6067 5303 225 0 0 0 chr5 121978397 121978422 -81107110 + (T)n Simple_repeat Simple_repeat 1 25 0 27 62 0 0 chr5 121978632 121978680 -81106852 + AT_rich Low_complexity Low_complexity 1 48 0 336 336 97 16 chr5 121978710 121979338 -81106194 - L1MC4a LINE L1 -1450 4696 4018 9711 218 48 67 chr5 121979388 121980158 -81105374 + L1 LINE L1 2225 3008 -3158 2174 110 7 0 chr5 121980158 121980457 -81105075 - AluSg SINE Alu -9 301 1 9711 218 48 67 chr5 121980457 121980473 -81105059 + L1 LINE L1 3008 3023 -3143 1330 220 20 27 chr5 121980473 121980769 -81104763 - AluJo SINE Alu -8 294 1 9711 218 48 67 chr5 121980769 121983243 -81102289 + L1 LINE L1 3023 5423 -743 661 223 81 71 chr5 121983269 121983515 -81102017 + MLT1H1 LTR MaLR 244 495 -60 2087 125 7 0 chr5 121983515 121983802 -81101730 - AluSp SINE Alu -24 289 1 661 223 81 71 chr5 121983802 121983864 -81101668 + MLT1H1 LTR MaLR 495 555 0 354 347 86 8 chr5 121983864 121984109 -81101423 - L1MC4a LINE L1 -2339 3807 3544 4536 171 11 53 chr5 121984121 121985071 -81100461 - L1MA4 LINE L1 -1 6299 5390 479 296 37 61 chr5 121985223 121985601 -81099931 - L1MC4a LINE L1 -2663 3483 3115 281 67 0 22 chr5 121986271 121986316 -81099216 + (GA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 121987626 121987647 -81097885 + AT_rich Low_complexity Low_complexity 1 21 0 2243 71 0 0 chr5 121988202 121988483 -81097049 - AluY SINE Alu -30 281 1 262 333 46 26 chr5 121989257 121989410 -81096122 - MIR SINE MIR -87 175 20 260 267 0 0 chr5 121989832 121989892 -81095640 + MIR SINE MIR 81 140 -122 23 54 0 0 chr5 121990009 121990046 -81095486 + AT_rich Low_complexity Low_complexity 1 37 0 1878 201 18 76 chr5 121990466 121990526 -81095006 - L1M2 LINE L1 -617 5695 5633 448 133 0 36 chr5 121990526 121990609 -81094923 - MADE1 DNA Mariner 0 80 1 1878 201 18 76 chr5 121990609 121991175 -81094357 - L1M2 LINE L1 -679 5633 5117 249 325 25 0 chr5 121991947 121992027 -81093505 - L2 LINE L2 -5 3267 3186 266 310 130 59 chr5 121992147 121992586 -81092946 - L2 LINE L2 -1 3312 2843 452 219 107 12 chr5 121992713 121992882 -81092650 + MIR SINE MIR 78 262 0 6672 72 3 0 chr5 121992986 121993857 -81091675 - L1PA7 LINE L1 0 6154 5281 807 337 43 51 chr5 121993915 121994479 -81091053 - L2 LINE L2 -722 2592 2034 1629 169 10 24 chr5 121994997 121995292 -81090240 - AluJo SINE Alu -21 291 1 24 53 0 0 chr5 121995292 121995330 -81090202 + AT_rich Low_complexity Low_complexity 1 38 0 300 150 25 75 chr5 121995360 121995440 -81090092 + L1MCa LINE L1 1989 2064 -4362 * 359 208 0 62 chr5 121995421 121995517 -81090015 - L1MC4 LINE L1 -1339 6703 6614 359 234 0 43 chr5 121995435 121995529 -81090003 + L1MC4 LINE L1 6614 6703 -1339 311 182 0 30 chr5 121995539 121995605 -81089927 + L1MC4 LINE L1 6640 6703 -1339 220 137 39 0 chr5 121995994 121996045 -81089487 + (TA)n Simple_repeat Simple_repeat 2 54 0 208 116 58 43 chr5 121998146 121998215 -81087317 + A-rich Low_complexity Low_complexity 1 70 0 1991 136 10 19 chr5 121998636 121998946 -81086586 + AluSx SINE Alu 5 311 -1 278 282 31 104 chr5 121999186 121999349 -81086183 - MIR3 SINE MIR -29 179 29 1604 210 94 56 chr5 121999525 122000024 -81085508 + MLT2B1 LTR ERVL 1 518 -2 686 322 67 25 chr5 122000916 122001230 -81084302 + L2 LINE L2 2252 2578 -736 805 309 53 28 chr5 122001350 122001922 -81083610 - L2 LINE L2 -32 3281 2692 1304 221 101 33 chr5 122003763 122004122 -81081410 - L1MEc LINE L1 -3004 3211 2793 2311 104 10 0 chr5 122004122 122004431 -81081101 - AluSx SINE Alu 0 312 1 1304 221 101 33 chr5 122004431 122004678 -81080854 - L1MEc LINE L1 -3422 2793 2564 307 209 0 164 chr5 122004684 122004885 -81080647 - L1MEc LINE L1 -3745 2470 2303 293 163 8 21 chr5 122004885 122005144 -81080388 + AluJo SINE Alu 1 296 -6 292 261 73 40 chr5 122005209 122005481 -81080051 - L1MEc LINE L1 -4138 2258 1978 529 311 57 27 chr5 122005652 122005948 -81079584 - L1MEc LINE L1 -5719 486 182 460 240 78 116 chr5 122006652 122006894 -81078638 - MER102a DNA MER1_type 0 330 98 341 300 18 11 chr5 122007331 122007466 -81078066 - MIR3 SINE MIR -24 184 50 29 84 0 0 chr5 122008550 122008621 -81076911 + AT_rich Low_complexity Low_complexity 1 71 0 822 231 12 12 chr5 122009007 122009180 -81076352 + MER5B DNA MER1_type 6 178 0 36 0 0 0 chr5 122009294 122009330 -81076202 + AT_rich Low_complexity Low_complexity 1 36 0 865 278 53 43 chr5 122009558 122010190 -81075342 - L1ME3A LINE L1 -240 5930 5268 2904 51 54 3 chr5 122010263 122010654 -81074878 + L1PA7 LINE L1 5744 6154 0 405 324 62 32 chr5 122010790 122011229 -81074303 - L1ME3A LINE L1 -1182 4964 4513 26 30 0 0 chr5 122011238 122011271 -81074261 + AT_rich Low_complexity Low_complexity 1 33 0 429 267 39 58 chr5 122011378 122011584 -81073948 - L1MC5 LINE L1 -49 7912 7711 267 324 140 5 chr5 122011799 122012207 -81073325 - L1ME3A LINE L1 -2027 4119 3657 964 49 0 0 chr5 122012226 122012349 -81073183 - L1PA4 LINE L1 -3 6152 6030 357 305 79 26 chr5 122012570 122012760 -81072772 - L1ME3A LINE L1 -2846 3300 3101 930 224 60 9 chr5 122012781 122013013 -81072519 - L1MB7 LINE L1 -21 6399 6156 7280 234 68 24 chr5 122013013 122014247 -81071285 - L1MB7 LINE L1 -574 5840 4662 2092 108 11 0 chr5 122014247 122014608 -81070924 - AluSc SINE Alu 0 364 1 7280 234 68 24 chr5 122014608 122016163 -81069369 - L1MB7 LINE L1 -1752 4662 2923 * 9449 172 16 27 chr5 122016145 122019136 -81066396 + L1PB1 LINE L1 3200 6150 -1 334 248 72 24 chr5 122019136 122019261 -81066271 - L1MB7 LINE L1 -3447 2935 2805 * 1572 191 69 43 chr5 122019256 122020095 -81065437 - L1P5 LINE L1 -439 5948 2235 3977 159 26 22 chr5 122020114 122020685 -81064847 - L1PA16 LINE L1 0 6166 5590 2453 28 0 0 chr5 122020685 122020976 -81064556 - L1PA4 LINE L1 0 6155 5865 3977 159 26 22 chr5 122020976 122021132 -81064400 - L1PA16 LINE L1 -576 5590 5436 714 253 253 30 chr5 122021147 122021673 -81063859 - L1MB7 LINE L1 -4183 2201 1559 43 29 0 15 chr5 122021825 122021858 -81063674 + AT_rich Low_complexity Low_complexity 1 33 -34 2214 100 0 0 chr5 122021858 122022149 -81063383 - AluSq SINE Alu -22 291 1 43 29 0 15 chr5 122022149 122022183 -81063349 + AT_rich Low_complexity Low_complexity 33 67 0 21 0 0 0 chr5 122022414 122022435 -81063097 + AT_rich Low_complexity Low_complexity 1 21 0 838 244 135 14 chr5 122024799 122025148 -81060384 + L1ME3A LINE L1 5767 6157 -13 210 118 0 0 chr5 122025517 122025551 -81059981 + (A)n Simple_repeat Simple_repeat 1 34 0 1369 223 30 48 chr5 122027918 122028312 -81057220 - MLT1B LTR MaLR -3 387 1 1338 250 76 29 chr5 122028493 122028977 -81056555 - L1MEc LINE L1 -5769 627 121 216 0 0 0 chr5 122028979 122029003 -81056529 + (A)n Simple_repeat Simple_repeat 1 24 0 1121 260 126 39 chr5 122029206 122030018 -81055514 - L1MEc LINE L1 -1253 5287 4406 5997 161 29 58 chr5 122030160 122032441 -81053091 - L1MA6 LINE L1 0 7321 5119 916 188 13 13 chr5 122032433 122032657 -81052875 - L1MA6 LINE L1 -2733 4434 4211 * 9926 209 20 49 chr5 122032664 122035688 -81049844 - L1MA6 LINE L1 -4241 2927 3 259 320 14 5 chr5 122035702 122035921 -81049611 - L1MEc LINE L1 -2194 4346 4100 302 214 111 40 chr5 122035963 122036089 -81049443 - L1MEc LINE L1 -3112 3428 3294 434 280 26 50 chr5 122036103 122036325 -81049207 - L1MEc LINE L1 -4561 2020 1760 1348 201 24 73 chr5 122036364 122036761 -81048771 + MLT1C LTR MaLR 1 465 -2 182 37 37 0 chr5 122037523 122037550 -81047982 + (CA)n Simple_repeat Simple_repeat 1 28 0 1939 65 0 12 chr5 122037587 122037832 -81047700 + AluY SINE Alu 54 295 -16 21 36 0 0 chr5 122038402 122038430 -81047102 + AT_rich Low_complexity Low_complexity 1 28 0 298 299 47 47 chr5 122038484 122038591 -81046941 + L2 LINE L2 3191 3297 -16 285 295 54 0 chr5 122038651 122038780 -81046752 - L1ME LINE L1 -319 5802 5667 306 98 0 0 chr5 122039593 122039644 -81045888 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 731 285 86 73 chr5 122040323 122040940 -81044592 - L2 LINE L2 -174 3139 2302 13973 147 32 16 chr5 122040944 122041657 -81043875 - Tigger1 DNA MER2_type -1 2417 1717 1336 210 154 76 chr5 122041657 122042171 -81043361 - MLT2B3 LTR ERVL 0 554 1 13973 147 32 16 chr5 122042171 122043834 -81041698 - Tigger1 DNA MER2_type -701 1717 2 2759 239 65 23 chr5 122043975 122044123 -81041409 - L1MD3 LINE L1 0 8039 7899 249 33 0 0 chr5 122044123 122044153 -81041379 + (CA)n Simple_repeat Simple_repeat 2 31 0 2759 239 65 23 chr5 122044153 122044920 -81040612 - L1MD3 LINE L1 -140 7899 7102 21 57 0 0 chr5 122045686 122045721 -81039811 + AT_rich Low_complexity Low_complexity 1 35 0 200 222 0 0 chr5 122046156 122046201 -81039331 + A-rich Low_complexity Low_complexity 1 45 0 5560 229 76 87 chr5 122046697 122048767 -81036765 - L1ME1 LINE L1 -281 5885 3794 2395 71 0 3 chr5 122048767 122049064 -81036468 + AluY SINE Alu 1 296 -15 5560 229 76 87 chr5 122049064 122049935 -81035597 - L1ME1 LINE L1 -2372 3794 2848 849 171 0 7 chr5 122049935 122050081 -81035451 - FAM SINE Alu -13 172 28 5560 229 76 87 chr5 122050081 122050559 -81034973 - L1ME1 LINE L1 -3318 2848 2366 1943 125 0 14 chr5 122050855 122051155 -81034377 + AluSc SINE Alu 12 309 0 29 84 0 0 chr5 122052200 122052271 -81033261 + AT_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 122052589 122052610 -81032922 + AT_rich Low_complexity Low_complexity 1 21 0 180 406 146 10 chr5 122053116 122053212 -81032320 - L2 LINE L2 -39 3233 3125 271 320 10 10 chr5 122053286 122053383 -81032149 - MLT1J2 LTR MaLR -8 442 346 1632 158 174 11 chr5 122054166 122054534 -81030998 - MSTA LTR MaLR 0 428 1 261 321 138 0 chr5 122054646 122054755 -81030777 + L2 LINE L2 3188 3311 -2 216 357 0 0 chr5 122054773 122054843 -81030689 - L2 LINE L2 -957 2357 2288 21 0 0 0 chr5 122055835 122055856 -81029676 + AT_rich Low_complexity Low_complexity 1 21 0 387 160 0 0 chr5 122057275 122057350 -81028182 + (TA)n Simple_repeat Simple_repeat 2 76 0 267 284 62 0 chr5 122058063 122058144 -81027388 + L2 LINE L2 2666 2751 -563 320 264 124 16 chr5 122058237 122058366 -81027166 + HAL1 LINE L1 587 729 -1778 1439 261 114 29 chr5 122058378 122058902 -81026630 + MLT1F1 LTR MaLR 1 567 0 489 223 23 80 chr5 122059007 122059182 -81026350 + L1MA10 LINE L1 6166 6330 -4 * 782 257 29 56 chr5 122059179 122059626 -81025906 + HAL1 LINE L1 826 1260 -1247 320 180 0 0 chr5 122059743 122059804 -81025728 - MLT1E LTR MaLR 0 567 507 15789 167 47 10 chr5 122059809 122062624 -81022908 + L1M1 LINE L1 17 2937 -4628 606 285 120 48 chr5 122062649 122062982 -81022550 - MLT1E LTR MaLR -233 360 4 828 241 74 0 chr5 122063120 122063323 -81022209 + MER20 DNA MER1_type 2 219 0 262 280 80 96 chr5 122063331 122063570 -81021962 + MLT1I LTR MaLR 107 341 -68 296 243 48 19 chr5 122063637 122063740 -81021792 + HAL1 LINE L1 1486 1591 -916 577 238 82 126 chr5 122063893 122064187 -81021345 + HAL1 LINE L1 1606 1886 -621 28 61 0 0 chr5 122067047 122067096 -81018436 + AT_rich Low_complexity Low_complexity 1 49 0 304 164 14 55 chr5 122067105 122067178 -81018354 - L1PA16 LINE L1 -2 6164 6095 * 6273 150 26 3 chr5 122067174 122069107 -81016425 + L1MA2 LINE L1 4327 6304 0 5107 214 35 173 chr5 122069186 122072348 -81013184 - L1P LINE L1 -1823 4323 1600 360 273 41 8 chr5 122072447 122072568 -81012964 - L1ME LINE L1 -367 5803 5679 294 276 69 36 chr5 122072549 122072853 -81012679 - L1MEd LINE L1 -5015 1104 791 * 276 218 0 0 chr5 122074380 122074435 -81011097 + L1MC3 LINE L1 6716 6770 -1015 1208 212 24 135 chr5 122075551 122075686 -81009846 + MLT1C LTR MaLR 15 163 -304 1777 166 98 78 chr5 122075686 122076186 -81009346 - MER67D LTR ERV1 0 514 5 1208 212 24 135 chr5 122076186 122076241 -81009291 + MLT1C LTR MaLR 163 223 -244 2215 124 25 0 chr5 122076241 122076597 -81008935 + L1MA2 LINE L1 5940 6304 0 1208 212 24 135 chr5 122076597 122076915 -81008617 + MLT1C LTR MaLR 223 467 0 367 340 122 21 chr5 122077115 122077303 -81008229 - MIR SINE MIR -51 211 5 483 354 53 59 chr5 122078021 122078831 -81006701 - L2 LINE L2 0 3272 2471 399 89 0 0 chr5 122080615 122080671 -81004861 + (CA)n Simple_repeat Simple_repeat 1 56 0 22 0 0 0 chr5 122080967 122080989 -81004543 + AT_rich Low_complexity Low_complexity 1 22 0 2378 43 0 23 chr5 122081896 122082200 -81003332 - AluY SINE Alu -1 310 14 25 0 0 0 chr5 122083007 122083032 -81002500 + AT_rich Low_complexity Low_complexity 1 25 0 322 197 15 0 chr5 122084743 122084809 -81000723 - Charlie8 DNA MER1_type 0 2417 2351 677 272 106 22 chr5 122085551 122085871 -80999661 - HAL1 LINE L1 -2119 388 42 21 36 0 0 chr5 122085953 122085981 -80999551 + AT_rich Low_complexity Low_complexity 1 28 0 326 373 24 8 chr5 122086038 122086164 -80999368 + MIR SINE MIR 23 150 -112 674 323 129 0 chr5 122086179 122086489 -80999043 - LTR50 LTR ERVL -2 793 444 314 209 0 0 chr5 122086630 122086697 -80998835 - LTR50 LTR ERVL -723 72 6 255 61 0 0 chr5 122086806 122086839 -80998693 + (A)n Simple_repeat Simple_repeat 1 33 0 2249 81 3 3 chr5 122088958 122089254 -80996278 + AluY SINE Alu 1 296 -15 318 271 49 60 chr5 122090056 122090377 -80995155 - L2 LINE L2 -2 3311 2936 361 324 14 29 chr5 122090386 122090593 -80994939 + MLT1I LTR MaLR 5 208 -201 286 235 49 12 chr5 122090682 122090763 -80994769 + MLT1I LTR MaLR 318 401 -8 222 371 26 0 chr5 122090770 122090886 -80994646 - L2 LINE L2 -390 2924 2806 2176 144 41 35 chr5 122090905 122091445 -80994087 - MLT2A2 LTR ERVL -7 547 1 27 29 0 0 chr5 122091549 122091583 -80993949 + AT_rich Low_complexity Low_complexity 1 34 0 2446 146 66 0 chr5 122092542 122092995 -80992537 + L1MB2 LINE L1 5687 6169 -2 667 293 47 12 chr5 122093542 122093795 -80991737 + MIR SINE MIR 1 262 0 1155 318 46 26 chr5 122094071 122094654 -80990878 - MER115 DNA AcHobo -3 690 1 1910 240 39 11 chr5 122094923 122095385 -80990147 + HsTC2 DNA Tc2 2 476 -1422 4081 194 60 102 chr5 122095652 122095839 -80989693 - L1 LINE L1 -2786 4779 4586 1943 146 7 0 chr5 122095839 122096127 -80989405 - AluSx SINE Alu -14 298 9 4081 194 60 102 chr5 122096127 122097963 -80987569 - L1 LINE L1 -2979 4586 2843 967 173 45 0 chr5 122097957 122098136 -80987396 + L1M1 LINE L1 5607 5793 -510 * 378 91 0 0 chr5 122098138 122098193 -80987339 + (TG)n Simple_repeat Simple_repeat 2 56 0 374 276 24 8 chr5 122098193 122098320 -80987212 - L1ME LINE L1 -544 5689 5561 909 307 53 37 chr5 122098330 122099088 -80986444 - L1ME LINE L1 -4838 1558 789 22 35 0 0 chr5 122099088 122099117 -80986415 + AT_rich Low_complexity Low_complexity 1 29 0 311 252 84 0 chr5 122099841 122099948 -80985584 + MER69 DNA AcHobo 2408 2523 -3 233 179 0 45 chr5 122101393 122101460 -80984072 + T-rich Low_complexity Low_complexity 5 68 0 341 271 16 31 chr5 122101835 122101964 -80983568 + LTR67 LTR ERVL 429 555 -2 685 251 93 91 chr5 122102310 122102749 -80982783 - Charlie8 DNA MER1_type -1947 470 31 247 408 54 0 chr5 122104136 122104266 -80981266 - MIR SINE MIR -122 140 4 391 299 58 22 chr5 122105324 122105548 -80979984 - LTR67 LTR ERVL 0 557 326 819 276 153 43 chr5 122107980 122108090 -80977442 - MLT1J LTR MaLR -5 506 409 1768 151 66 36 chr5 122108090 122108454 -80977078 + THE1C LTR MaLR 1 375 0 819 276 153 43 chr5 122108454 122108735 -80976797 - MLT1J LTR MaLR -102 409 72 328 278 102 66 chr5 122108751 122109114 -80976418 + L1MCc LINE L1 11 386 -6037 405 307 35 89 chr5 122109381 122109694 -80975838 + L1MCc LINE L1 818 1113 -5310 798 205 32 5 chr5 122109699 122109889 -80975643 + L1 LINE L1 2837 3031 -3115 3598 120 37 15 chr5 122109890 122110458 -80975074 + L1MA3 LINE L1 5535 6120 -185 2157 138 0 3 chr5 122110458 122110770 -80974762 - AluSq SINE Alu -2 311 1 3598 120 37 15 chr5 122110770 122110852 -80974680 + L1MA3 LINE L1 6120 6199 -106 1808 234 81 6 chr5 122110866 122111506 -80974026 + L1MCc LINE L1 2992 3679 -3262 1544 199 35 27 chr5 122111648 122112015 -80973517 + MLT1A2 LTR MaLR 1 370 -4 182 276 17 0 chr5 122112055 122112113 -80973419 + L2 LINE L2 1630 1688 -1626 208 213 106 0 chr5 122113004 122113051 -80972481 + L2 LINE L2 3221 3272 0 198 0 0 0 chr5 122113096 122113118 -80972414 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 360 0 0 0 chr5 122113117 122113157 -80972375 + (CA)n Simple_repeat Simple_repeat 1 40 0 2155 142 0 0 chr5 122115161 122115470 -80970062 - AluSx SINE Alu -3 309 1 2934 179 19 55 chr5 122115867 122116502 -80969030 + LTR9 LTR ERV1 1 612 0 22 0 0 0 chr5 122117768 122117790 -80967742 + AT_rich Low_complexity Low_complexity 1 22 0 1265 186 99 0 chr5 122117982 122118245 -80967287 - MLT1A1 LTR MaLR -1 364 76 3288 133 19 13 chr5 122118246 122118858 -80966674 - MER4B LTR ERV1 -1 778 1 512 132 0 0 chr5 122118858 122118934 -80966598 - MLT1A1 LTR MaLR -286 79 4 927 324 34 36 chr5 122120228 122120465 -80965067 + LTR16C LTR ERVL 6 242 -249 2140 109 7 26 chr5 122120465 122120767 -80964765 - AluSx SINE Alu -16 296 1 927 324 34 36 chr5 122120767 122121007 -80964525 + LTR16C LTR ERVL 242 482 -9 1832 163 55 22 chr5 122121088 122121451 -80964081 - THE1C LTR MaLR 0 375 1 875 228 17 100 chr5 122121519 122121940 -80963592 + L1MB7 LINE L1 4824 5209 -937 4148 199 72 14 chr5 122121961 122123765 -80961767 + L1MC2 LINE L1 4408 6319 -25 3703 193 57 12 chr5 122123780 122124724 -80960808 + L1MB7 LINE L1 5192 6177 -7 1424 103 62 33 chr5 122124736 122125009 -80960523 + L1MA4A LINE L1 6023 6303 0 22 70 0 0 chr5 122125069 122125112 -80960420 + AT_rich Low_complexity Low_complexity 1 43 0 186 357 107 21 chr5 122125308 122125448 -80960084 + MIR SINE MIR 28 179 -83 707 303 81 31 chr5 122125450 122125807 -80959725 - L2 LINE L2 -13 3300 2926 285 248 26 43 chr5 122126075 122126192 -80959340 + 7SK RNA RNA 4 118 -75 333 307 56 110 chr5 122128626 122129139 -80956393 - L2 LINE L2 -36 3277 2797 2592 230 89 40 chr5 122129139 122129225 -80956307 + L1MB7 LINE L1 4167 4247 -1937 297 0 0 0 chr5 122129225 122129258 -80956274 + (CA)n Simple_repeat Simple_repeat 1 33 0 2592 230 89 40 chr5 122129258 122129452 -80956080 + L1MB7 LINE L1 4247 4430 -1754 4274 98 10 5 chr5 122129452 122130065 -80955467 + L1PA13 LINE L1 5544 6159 -4 2592 230 89 40 chr5 122130065 122131728 -80953804 + L1MB7 LINE L1 4430 6183 -1 481 325 7 13 chr5 122132548 122132699 -80952833 - MIR3 SINE MIR -51 157 8 2113 135 14 0 chr5 122134080 122134377 -80951155 + AluSc SINE Alu 1 301 -8 350 250 54 0 chr5 122135194 122135286 -80950246 + L1ME1 LINE L1 5487 5583 -583 1381 219 114 87 chr5 122135286 122136011 -80949521 + LTR1B LTR ERV1 1 745 -81 1134 242 82 4 chr5 122136129 122136564 -80948968 + L1ME1 LINE L1 5576 6055 -123 402 234 41 0 chr5 122136566 122136737 -80948795 + (TA)n Simple_repeat Simple_repeat 2 179 0 2127 133 0 10 chr5 122137036 122137344 -80948188 + AluSx SINE Alu 1 305 -7 378 0 0 0 chr5 122137345 122137387 -80948145 + (CA)n Simple_repeat Simple_repeat 1 42 0 580 125 10 0 chr5 122137911 122138007 -80947525 + L1MA5A LINE L1 6195 6291 -6 33 0 0 0 chr5 122138007 122138040 -80947492 + AT_rich Low_complexity Low_complexity 1 33 0 1311 304 66 21 chr5 122138728 122139456 -80946076 + L2 LINE L2 2555 3312 -1 251 91 23 0 chr5 122139590 122139634 -80945898 - MER31A LTR ERV1 -6 479 435 1442 58 69 0 chr5 122139634 122139823 -80945709 - AluY SINE Alu -4 307 106 2300 143 7 37 chr5 122139823 122140278 -80945254 - MER31A LTR ERV1 -44 441 1 604 259 118 0 chr5 122140523 122140693 -80944839 - MIR SINE MIR 0 262 73 2376 162 54 2 chr5 122141114 122141521 -80944011 + MSTA LTR MaLR 1 428 0 210 216 125 45 chr5 122141701 122141789 -80943743 - L2 LINE L2 -13 3300 3206 225 0 0 0 chr5 122142656 122142681 -80942851 + (A)n Simple_repeat Simple_repeat 1 25 0 440 317 99 7 chr5 122142973 122143115 -80942417 - L2 LINE L2 -16 3256 3102 22 0 0 0 chr5 122144131 122144153 -80941379 + AT_rich Low_complexity Low_complexity 1 22 0 351 300 9 9 chr5 122144239 122144349 -80941183 + MIR3 SINE MIR 67 176 -32 185 338 25 12 chr5 122144392 122144472 -80941060 + MER5B DNA MER1_type 95 175 -3 271 358 83 18 chr5 122145157 122145266 -80940266 - MIR SINE MIR -75 133 18 2403 113 11 21 chr5 122145381 122145760 -80939772 - THE1C LTR MaLR 0 375 1 9939 124 40 7 chr5 122145760 122147290 -80938242 - THE1C-int LTR MaLR 0 1580 1 2384 118 16 19 chr5 122147290 122147664 -80937868 - THE1C LTR MaLR 0 375 3 377 269 83 33 chr5 122149346 122149527 -80936005 - MIR SINE MIR -14 248 61 420 271 96 42 chr5 122149629 122149795 -80935737 + MIR3 SINE MIR 19 193 -15 195 245 82 0 chr5 122150344 122150393 -80935139 - L2 LINE L2 -6 3307 3255 225 284 47 74 chr5 122150543 122150691 -80934841 - L2 LINE L2 -179 3093 2950 1978 98 72 7 chr5 122150835 122151112 -80934420 - AluSg SINE Alu -10 300 6 1127 110 7 0 chr5 122151221 122151375 -80934157 - AluSq SINE Alu -20 293 139 5871 29 0 0 chr5 122151533 122152216 -80933316 + L1PA3 LINE L1 5473 6155 0 306 222 37 0 chr5 122152916 122152997 -80932535 - L1ME4a LINE L1 -2 6119 6036 719 240 73 5 chr5 122154290 122154482 -80931050 - MSTD LTR MaLR -12 384 180 1880 138 60 0 chr5 122154514 122154797 -80930735 - AluSx SINE Alu -12 300 1 640 213 86 35 chr5 122154797 122154994 -80930538 - MIR SINE MIR -47 215 9 194 300 50 0 chr5 122156131 122156191 -80929341 - L2 LINE L2 -6 3307 3245 21 57 0 0 chr5 122156279 122156314 -80929218 + AT_rich Low_complexity Low_complexity 1 35 0 688 322 13 15 chr5 122157572 122158044 -80927488 - L1M4 LINE L1 -3382 2764 2294 1538 128 98 49 chr5 122158887 122159153 -80926379 + AluSx SINE Alu 1 279 -33 21 0 0 0 chr5 122159516 122159537 -80925995 + AT_rich Low_complexity Low_complexity 1 21 0 1831 124 4 0 chr5 122159733 122159990 -80925542 - AluSc SINE Alu -51 258 1 384 303 72 20 chr5 122161213 122161365 -80924167 + MIR3 SINE MIR 43 202 -6 368 277 166 10 chr5 122161703 122161886 -80923646 + MIR3 SINE MIR 12 221 -41 189 0 0 0 chr5 122162281 122162302 -80923230 + (T)n Simple_repeat Simple_repeat 1 21 0 1755 206 43 53 chr5 122162681 122163170 -80922362 - MLT1D LTR MaLR 0 505 22 366 232 27 18 chr5 122163486 122163608 -80921924 + L1ME4a LINE L1 5711 5835 -286 4939 105 40 55 chr5 122164379 122165262 -80920270 + MER4D LTR ERV1 4 872 0 2732 171 23 94 chr5 122165530 122166274 -80919258 + LTR8 LTR ERV1 1 691 0 393 22 0 0 chr5 122166568 122166614 -80918918 + (CA)n Simple_repeat Simple_repeat 1 46 0 493 331 80 46 chr5 122166615 122167005 -80918527 - L2 LINE L2 -480 2834 2432 1543 206 41 33 chr5 122167227 122167595 -80917937 - MLT1D LTR MaLR -134 371 1 36 23 0 0 chr5 122168019 122168062 -80917470 + AT_rich Low_complexity Low_complexity 1 43 0 371 293 9 0 chr5 122169185 122169301 -80916231 + L2 LINE L2 2423 2539 -775 297 367 110 13 chr5 122169355 122169592 -80915940 + HERV16 LTR ERVL 1416 1675 -4089 478 307 50 74 chr5 122169822 122170284 -80915248 + HERV16 LTR ERVL 3338 3788 -1208 1464 343 69 32 chr5 122170330 122171444 -80914088 + HERV16 LTR ERVL 4169 5323 -441 668 341 93 32 chr5 122171648 122172055 -80913477 + LTR16A LTR ERVL 19 450 0 834 316 96 31 chr5 122172085 122172502 -80913030 + L3 LINE CR1 1013 1456 -121 1768 176 75 20 chr5 122172502 122172848 -80912684 - MLT1A1 LTR MaLR 0 365 1 1228 241 120 38 chr5 122172932 122173509 -80912023 - MLT1E3 LTR MaLR 0 624 1 22 0 0 0 chr5 122174856 122174878 -80910654 + AT_rich Low_complexity Low_complexity 1 22 0 3330 247 29 13 chr5 122175568 122176701 -80908831 + L1M1 LINE L1 3406 4564 -3001 2096 152 52 22 chr5 122176704 122177220 -80908312 + L1MA9 LINE L1 5143 5672 -640 1382 169 4 33 chr5 122177251 122177494 -80908038 + AluJo SINE Alu 7 242 -70 188 33 0 33 chr5 122177526 122177556 -80907976 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 613 164 9 0 chr5 122177573 122177683 -80907849 + L1MA9 LINE L1 5679 5789 -523 2062 178 39 29 chr5 122177683 122177842 -80907690 - Tigger2a DNA MER2_type -2274 434 278 180 0 0 0 chr5 122177842 122177862 -80907670 + (TA)n Simple_repeat Simple_repeat 1 20 0 2062 178 39 29 chr5 122177862 122178117 -80907415 - Tigger2a DNA MER2_type -2430 278 16 242 196 39 0 chr5 122178120 122178171 -80907361 - Tigger2a DNA MER2_type -373 61 9 315 0 0 0 chr5 122178178 122178213 -80907319 + (TG)n Simple_repeat Simple_repeat 2 36 0 2256 194 38 18 chr5 122178216 122178715 -80906817 + L1MA9 LINE L1 5782 6290 -22 212 183 0 33 chr5 122179189 122179249 -80906283 + (CATA)n Simple_repeat Simple_repeat 1 58 0 408 321 22 72 chr5 122179451 122179697 -80905835 + MIR3 SINE MIR 1 232 -3 1097 168 69 0 chr5 122180007 122180210 -80905322 + MER20 DNA MER1_type 1 217 -2 1029 280 85 81 chr5 122180933 122181440 -80904092 + MLT1G1 LTR MaLR 76 584 -11 2020 135 0 10 chr5 122181765 122182069 -80903463 - AluSq SINE Alu -11 302 2 234 116 0 0 chr5 122182079 122182122 -80903410 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 776 197 14 0 chr5 122182129 122182271 -80903261 - AluJb SINE Alu -33 279 136 318 152 89 0 chr5 122183526 122183605 -80901927 - L1MB1 LINE L1 0 6168 6083 323 326 43 43 chr5 122183840 122184027 -80901505 + MIR SINE MIR 21 207 -55 231 224 20 0 chr5 122184084 122184133 -80901399 - MLT1I LTR MaLR 0 409 360 465 290 65 35 chr5 122184260 122184460 -80901072 - MLT1I LTR MaLR -203 206 1 2169 202 44 0 chr5 122185115 122185495 -80900037 - L1MA4 LINE L1 -6 6476 6067 1574 190 0 10 chr5 122185495 122185784 -80899748 - AluJb SINE Alu -6 306 21 2169 202 44 0 chr5 122185784 122185907 -80899625 - L1MA4 LINE L1 -415 6067 5951 6386 45 0 1 chr5 122185949 122186722 -80898810 - L1PA5 LINE L1 -1 6153 5382 661 122 0 0 chr5 122186722 122186820 -80898712 - L1MA4 LINE L1 -514 5968 5871 3144 109 9 2 chr5 122186820 122187261 -80898271 + MLT2A1 LTR ERVL 1 444 0 9120 76 0 11 chr5 122187261 122188449 -80897083 + HERVL-A1 LTR ERVL 1 1175 -4479 2642 99 25 5 chr5 122188440 122188832 -80896700 + HERVL-A1 LTR ERVL 5255 5654 0 * 3158 62 4 94 chr5 122188832 122189214 -80896318 + MLT2A1 LTR ERVL 1 331 -113 207 0 0 0 chr5 122189214 122189237 -80896295 + (TA)n Simple_repeat Simple_repeat 1 23 0 3158 62 4 94 chr5 122189237 122189342 -80896190 + MLT2A1 LTR ERVL 331 444 0 12739 206 34 27 chr5 122189342 122189930 -80895602 - L1MA4 LINE L1 -607 5875 5293 1929 116 4 4 chr5 122189930 122190197 -80895335 - AluSc SINE Alu -13 296 30 12739 206 34 27 chr5 122190197 122193686 -80891846 - L1MA4 LINE L1 -1189 5293 1751 1542 155 56 53 chr5 122193686 122194017 -80891515 - THE1C LTR MaLR 0 375 41 2373 89 0 0 chr5 122194017 122194319 -80891213 - AluSq SINE Alu -11 302 1 1542 155 56 53 chr5 122194319 122194361 -80891171 - THE1C LTR MaLR -334 41 1 12739 206 34 27 chr5 122194361 122195378 -80890154 - L1MA4 LINE L1 -4731 1751 743 3291 231 19 14 chr5 122195388 122196092 -80889440 - L1MA4 LINE L1 -4621 707 1 19188 174 26 24 chr5 122196132 122203833 -80881699 + L1MA1 LINE L1 12 7721 0 213 231 0 0 chr5 122203914 122203966 -80881566 + A-rich Low_complexity Low_complexity 2 53 0 270 230 92 23 chr5 122204223 122204310 -80881222 + MLT1F LTR MaLR 282 374 -168 270 200 173 0 chr5 122204323 122204398 -80881134 + MLT1H LTR MaLR 420 507 -42 471 321 103 23 chr5 122204432 122204877 -80880655 + L2 LINE L2 2827 3313 0 2350 85 0 0 chr5 122205169 122205462 -80880070 - AluSg1 SINE Alu -16 293 1 243 61 0 0 chr5 122206178 122206211 -80879321 + (TC)n Simple_repeat Simple_repeat 2 34 0 498 17 0 0 chr5 122206211 122206270 -80879262 + (CA)n Simple_repeat Simple_repeat 1 59 0 198 162 0 59 chr5 122206509 122206577 -80878955 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 885 289 53 4 chr5 122207708 122207954 -80877578 - MIR SINE MIR 0 262 5 822 252 98 78 chr5 122208084 122208184 -80877348 - LTR50 LTR ERVL 0 795 698 3566 178 38 15 chr5 122208184 122208869 -80876663 - MER44D DNA MER2_type -3 702 2 822 252 98 78 chr5 122208869 122209435 -80876097 - LTR50 LTR ERVL -97 698 29 4739 254 75 42 chr5 122209468 122210891 -80874641 - MSTD-int LTR MaLR -264 1471 2 1924 201 26 13 chr5 122210891 122211280 -80874252 - MSTD LTR MaLR -2 394 1 1806 120 106 38 chr5 122211670 122212011 -80873521 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 122212105 122212126 -80873406 + AT_rich Low_complexity Low_complexity 1 21 0 246 291 0 0 chr5 122214628 122214683 -80870849 + MIR SINE MIR 185 239 -23 222 230 27 68 chr5 122215318 122215392 -80870140 + MIR SINE MIR 83 153 -109 311 43 0 22 chr5 122215594 122215640 -80869892 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 267 157 0 0 chr5 122215649 122215700 -80869832 + CT-rich Low_complexity Low_complexity 2 52 0 699 12 0 0 chr5 122215700 122215780 -80869752 + (TTTCC)n Simple_repeat Simple_repeat 1 80 0 287 307 0 0 chr5 122216100 122216175 -80869357 - L2 LINE L2 -10 3262 3188 225 314 0 0 chr5 122274471 122274522 -80811010 + (CA)n Simple_repeat Simple_repeat 2 52 0 440 338 30 42 chr5 122275593 122276019 -80809513 + MER110-int LTR ERV1 2105 2525 -2122 315 221 158 11 chr5 122276396 122276491 -80809041 + MIR SINE MIR 45 153 -109 6806 49 2 14 chr5 122277243 122278322 -80807210 + L1PA4 LINE L1 5088 6155 0 1854 198 30 23 chr5 122278448 122279074 -80806458 - L1MC/D LINE L1 -645 5688 5057 190 235 294 0 chr5 122279278 122279431 -80806101 + MER5C DNA MER1_type 124 321 -3 819 219 22 0 chr5 122279573 122279756 -80805776 + AluSp SINE Alu 1 187 -126 2225 210 15 57 chr5 122279886 122280500 -80805032 - L1M1 LINE L1 -6964 601 14 4942 36 8 18 chr5 122281288 122282175 -80803357 - L1P2 LINE L1 -531 5624 4745 23 0 0 0 chr5 122282191 122282214 -80803318 + AT_rich Low_complexity Low_complexity 1 23 0 2705 153 39 19 chr5 122283131 122283667 -80801865 + L1MA4A LINE L1 5757 6303 0 533 208 122 77 chr5 122283705 122283926 -80801606 + MIR SINE MIR 4 234 -28 227 156 22 78 chr5 122284171 122284261 -80801271 + T-rich Low_complexity Low_complexity 5 89 0 1128 118 45 50 chr5 122284796 122285017 -80800515 + THE1C LTR MaLR 156 375 0 5009 219 22 10 chr5 122285017 122286340 -80799192 + L1M2 LINE L1 2791 4129 -2719 6477 58 16 35 chr5 122286790 122287657 -80797875 + L1PA7 LINE L1 4527 5362 -792 2288 86 3 3 chr5 122287657 122287948 -80797584 + AluY SINE Alu 3 293 -18 6477 58 16 35 chr5 122287948 122288727 -80796805 + L1PA7 LINE L1 5362 6154 0 1625 107 38 4 chr5 122289482 122289744 -80795788 - AluY SINE Alu -4 307 37 6707 61 22 0 chr5 122289888 122290820 -80794712 + L1PA4 LINE L1 5202 6152 -3 2355 77 7 3 chr5 122291312 122291622 -80793910 + AluY SINE Alu 1 311 0 780 208 0 6 chr5 122291673 122291846 -80793686 - L1MA6 LINE L1 0 6300 6129 3826 147 79 0 chr5 122291846 122292139 -80793393 + L1MA6 LINE L1 5462 5731 -569 216 0 0 0 chr5 122292139 122292163 -80793369 + (TG)n Simple_repeat Simple_repeat 2 25 0 3826 147 79 0 chr5 122292163 122292550 -80792982 + L1MA6 LINE L1 5731 6196 -104 532 261 229 23 chr5 122293039 122293257 -80792275 - LTR33 LTR ERVL -256 265 3 15970 43 0 1 chr5 122293317 122295305 -80790227 + L1P3 LINE L1 2604 4589 -1557 1089 77 7 0 chr5 122295807 122295962 -80789570 + L1P3 LINE L1 5327 5482 -690 248 298 73 74 chr5 122297363 122298360 -80787172 + L1ME LINE L1 527 1585 -4725 5722 145 14 38 chr5 122298665 122299276 -80786256 - L1MA4 LINE L1 -9 6291 5715 1514 199 3 3 chr5 122299276 122299558 -80785974 - AluJb SINE Alu -11 301 20 5722 145 14 38 chr5 122299558 122300051 -80785481 - L1MA4 LINE L1 -585 5715 5212 883 269 89 61 chr5 122300072 122301150 -80784382 + L1ME LINE L1 4249 5782 -371 25 0 0 0 chr5 122301396 122301421 -80784111 + AT_rich Low_complexity Low_complexity 1 25 0 240 279 36 18 chr5 122301475 122301586 -80783946 + L1ME LINE L1 5378 5490 -676 268 156 37 128 chr5 122301615 122301724 -80783808 + L1M4 LINE L1 4478 4576 -1570 384 22 0 0 chr5 122301788 122301833 -80783699 + (TG)n Simple_repeat Simple_repeat 2 46 0 25 31 0 0 chr5 122301880 122301912 -80783620 + AT_rich Low_complexity Low_complexity 1 32 0 1431 216 16 20 chr5 122301915 122302220 -80783312 + AluJo SINE Alu 1 304 -8 1247 216 39 22 chr5 122302765 122303074 -80782458 - MLT1A2 LTR MaLR -16 358 40 388 143 16 0 chr5 122303209 122303272 -80782260 - MLT1A2 LTR MaLR -310 64 1 982 140 54 37 chr5 122303538 122303753 -80781779 - THE1C LTR MaLR 0 375 174 576 210 8 11 chr5 122303918 122304042 -80781490 - MSTA LTR MaLR -235 129 1 1314 168 32 108 chr5 122304091 122304407 -80781125 + AluJo SINE Alu 1 292 -20 246 197 145 0 chr5 122305444 122305520 -80780012 + L1ME4a LINE L1 6009 6095 -26 583 208 67 0 chr5 122305991 122306111 -80779421 + MIR SINE MIR 111 238 -24 216 135 0 0 chr5 122306630 122306667 -80778865 + (TA)n Simple_repeat Simple_repeat 1 37 0 877 273 4 50 chr5 122307544 122307782 -80777750 + MLT1G LTR MaLR 13 239 -351 425 252 138 60 chr5 122308094 122308312 -80777220 - L2 LINE L2 -341 2973 2739 228 250 135 0 chr5 122308444 122308548 -80776984 - MLT1L LTR MaLR -22 593 476 330 239 0 0 chr5 122308757 122308822 -80776710 - MLT1L LTR MaLR -403 212 148 334 73 0 0 chr5 122308822 122308863 -80776669 - MER1B DNA MER1_type 0 339 299 * 1267 186 0 5 chr5 122308862 122309077 -80776455 - MER1B DNA MER1_type -83 214 1 321 214 24 24 chr5 122309077 122309159 -80776373 - MLT1L LTR MaLR -460 155 74 28 0 0 0 chr5 122310114 122310142 -80775390 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 122311055 122311097 -80774435 + AT_rich Low_complexity Low_complexity 1 42 0 1702 270 119 25 chr5 122311859 122312537 -80772995 - L2 LINE L2 -433 2881 2140 402 299 80 50 chr5 122312537 122312738 -80772794 - L2 LINE L2 -2228 1086 880 210 391 11 11 chr5 122312811 122312898 -80772634 - L2 LINE L2 -84 3188 3102 491 307 24 0 chr5 122313041 122313168 -80772364 - L2 LINE L2 0 3272 3143 9655 195 53 19 chr5 122313656 122316014 -80769518 + L1 LINE L1 2951 5389 -757 1644 165 94 6 chr5 122316016 122316367 -80769165 + Ricksha DNA DNA 2436 2817 -434 1174 270 76 13 chr5 122316861 122317388 -80768144 + L1ME LINE L1 5188 5753 -409 243 0 0 0 chr5 122317553 122317580 -80767952 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 328 291 59 48 chr5 122318445 122318782 -80766750 - L1ME LINE L1 -545 5617 5292 746 286 59 13 chr5 122318798 122319036 -80766496 + MIR SINE MIR 2 250 -12 31 26 0 0 chr5 122319138 122319176 -80766356 + AT_rich Low_complexity Low_complexity 1 38 0 2157 179 48 5 chr5 122319580 122320021 -80765511 + L1MC3 LINE L1 7326 7785 0 365 308 13 63 chr5 122320094 122320253 -80765279 - L2 LINE L2 0 3272 3122 229 344 11 0 chr5 122320404 122320494 -80765038 + GA-rich Low_complexity Low_complexity 2 92 0 374 347 54 21 chr5 122320494 122320828 -80764704 - L2 LINE L2 -412 2902 2558 249 108 0 0 chr5 122321341 122321378 -80764154 + (CA)n Simple_repeat Simple_repeat 1 37 0 25 0 0 0 chr5 122321980 122322005 -80763527 + AT_rich Low_complexity Low_complexity 1 25 0 316 352 70 0 chr5 122322109 122322237 -80763295 - L2 LINE L2 0 3272 3136 232 364 128 5 chr5 122322292 122322489 -80763043 + MIR SINE MIR 34 258 -4 272 341 114 39 chr5 122322695 122323132 -80762400 - L2 LINE L2 -793 2521 2052 24213 36 4 4 chr5 122323313 122326322 -80759210 - L1P LINE L1 -1095 5051 2042 5275 65 10 0 chr5 122326462 122327154 -80758378 + L1PA7 LINE L1 5451 6149 -5 398 210 70 0 chr5 122327607 122327707 -80757825 - MER5C DNA MER1_type -212 112 6 261 98 0 0 chr5 122328061 122328102 -80757430 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4744 27 4 0 chr5 122328154 122328716 -80756816 + L1PA4 LINE L1 5592 6155 0 2040 105 3 14 chr5 122330259 122330596 -80754936 - AluSx SINE Alu 0 334 1 621 235 0 0 chr5 122330755 122330874 -80754658 + MLT1E2 LTR MaLR 360 478 -148 3015 143 30 82 chr5 122330884 122331656 -80753876 - L1MA9 LINE L1 -5 6307 5576 807 94 0 0 chr5 122331762 122331868 -80753664 - AluSq/x SINE Alu -207 106 1 1305 130 9 9 chr5 122331880 122332135 -80753397 - L1MA9 LINE L1 -743 5403 5219 777 231 12 0 chr5 122332137 122332297 -80753235 + MLT1E2 LTR MaLR 465 626 0 2012 143 0 0 chr5 122332878 122333172 -80752360 - AluSx SINE Alu -18 294 1 5846 167 28 18 chr5 122333173 122334425 -80751107 - L1MC1 LINE L1 -10 6323 5057 283 216 40 111 chr5 122334819 122334935 -80750597 + MER5B DNA MER1_type 66 161 -17 2213 112 7 0 chr5 122334938 122335243 -80750289 + AluSx SINE Alu 1 307 -5 222 278 0 42 chr5 122335759 122335831 -80749701 + GA-rich Low_complexity Low_complexity 4 72 0 568 315 123 22 chr5 122336349 122336765 -80748767 - L2 LINE L2 -1159 2155 1698 21 0 0 0 chr5 122336928 122336949 -80748583 + AT_rich Low_complexity Low_complexity 1 21 0 300 255 0 0 chr5 122337763 122337865 -80747667 + T-rich Low_complexity Low_complexity 1 102 0 256 100 20 20 chr5 122337968 122338018 -80747514 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 210 338 14 50 chr5 122338078 122338217 -80747315 + MIR SINE MIR 59 192 -70 514 296 128 1 chr5 122338220 122338416 -80747116 + MIR SINE MIR 19 243 -19 25 0 0 0 chr5 122339690 122339715 -80745817 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 122340320 122340344 -80745188 + AT_rich Low_complexity Low_complexity 1 24 0 206 270 183 24 chr5 122341334 122341460 -80744072 + MIR SINE MIR 65 210 -52 1852 120 8 4 chr5 122341999 122342266 -80743266 + AluSg SINE Alu 43 310 0 1038 270 89 61 chr5 122342495 122342921 -80742611 - L2 LINE L2 -14 3299 2862 1036 264 17 62 chr5 122342950 122343303 -80742229 - L2 LINE L2 -357 2957 2621 262 163 0 0 chr5 122343319 122343368 -80742164 + L2 LINE L2 2196 2244 -1070 366 229 0 0 chr5 122343374 122343444 -80742088 - Tigger5 DNA MER2_type -4 2319 2250 294 211 0 0 chr5 122343415 122343467 -80742065 - Tigger5 DNA MER2_type -2271 52 1 * 1419 274 137 11 chr5 122343508 122344033 -80741499 + L2 LINE L2 2306 2896 -418 571 245 135 36 chr5 122344127 122344319 -80741213 - MIR SINE MIR 0 262 52 558 250 75 40 chr5 122348862 122349114 -80736418 + L1M4 LINE L1 2 262 -6280 1186 248 56 13 chr5 122349172 122349738 -80735794 + L1M4 LINE L1 1818 2498 -4148 732 128 17 17 chr5 122349752 122349893 -80735639 + AluSp/q SINE Alu 170 310 0 603 192 172 23 chr5 122349893 122350199 -80735333 + L1M4 LINE L1 2510 2866 -3778 431 269 70 47 chr5 122350629 122350800 -80734732 - MIR3 SINE MIR -31 177 3 298 329 42 36 chr5 122351085 122351252 -80734280 + L2 LINE L2 2228 2395 -919 230 263 118 0 chr5 122351415 122351491 -80734041 + MIR SINE MIR 117 201 -61 287 324 40 7 chr5 122352904 122353052 -80732480 + MIR SINE MIR 4 156 -106 30 69 0 0 chr5 122353623 122353681 -80731851 + AT_rich Low_complexity Low_complexity 1 58 0 258 308 14 28 chr5 122353852 122353995 -80731537 + L1M4 LINE L1 4203 4343 -2301 295 338 35 0 chr5 122354148 122354293 -80731239 + MIR SINE MIR 7 156 -106 29 70 0 0 chr5 122354764 122354821 -80730711 + AT_rich Low_complexity Low_complexity 1 57 0 415 308 43 66 chr5 122354992 122355508 -80730024 + L1ME2 LINE L1 3705 4208 -1938 469 324 57 42 chr5 122356157 122356543 -80728989 + L1M4 LINE L1 3204 3595 -3049 566 292 75 57 chr5 122356547 122357092 -80728440 + L1PA7 LINE L1 5309 5863 -291 * 2379 233 96 8 chr5 122356636 122357293 -80728239 + L1ME2 LINE L1 5391 6105 -59 1157 285 77 17 chr5 122357294 122357828 -80727704 + MLT1G1 LTR MaLR 6 516 -39 299 204 66 138 chr5 122357933 122358100 -80727432 - MLT1J LTR MaLR -11 500 346 206 285 131 23 chr5 122358248 122358378 -80727154 + L2 LINE L2 1285 1428 -1886 1595 126 44 4 chr5 122358388 122358658 -80726874 + LTR23 LTR ERV1 157 437 0 291 122 0 0 chr5 122358902 122358951 -80726581 + (TC)n Simple_repeat Simple_repeat 2 50 0 256 273 0 0 chr5 122358951 122359006 -80726526 + (CATA)n Simple_repeat Simple_repeat 2 56 0 223 301 50 87 chr5 122359056 122359275 -80726257 + L3 LINE CR1 1066 1276 -301 225 0 0 0 chr5 122359329 122359354 -80726178 + (TG)n Simple_repeat Simple_repeat 2 26 0 1170 156 143 29 chr5 122359922 122360229 -80725303 + MER4A LTR ERV1 1 342 -322 504 144 246 8 chr5 122360290 122360408 -80725124 + MER4C LTR ERV1 300 445 -20 6485 67 16 25 chr5 122360751 122362399 -80723133 + L1PA7 LINE L1 4527 6154 0 2159 91 3 3 chr5 122363157 122363464 -80722068 - AluY SINE Alu -4 307 1 41379 47 4 1 chr5 122363559 122369695 -80715837 + L1PA4 LINE L1 1 6155 0 269 342 51 43 chr5 122370158 122370275 -80715257 + MER110-int LTR ERV1 380 497 -6261 274 74 37 0 chr5 122370288 122370342 -80715190 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 705 82 0 0 chr5 122371975 122372072 -80713460 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 540 338 62 33 chr5 122372584 122373069 -80712463 + MER110-int LTR ERV1 127 3816 -3275 290 333 54 54 chr5 122373733 122374084 -80711448 + MER110-int LTR ERV1 3375 3725 -3076 441 344 29 41 chr5 122374786 122375228 -80710304 + MER110-int LTR ERV1 2105 2541 -2106 239 196 0 0 chr5 122376939 122376985 -80708547 - L1MC4 LINE L1 -1338 6704 6659 414 57 0 0 chr5 122376985 122377038 -80708494 + (TG)n Simple_repeat Simple_repeat 2 54 0 6012 202 7 11 chr5 122378335 122379476 -80706056 + L1MA2 LINE L1 22 1157 -6408 * 14705 173 20 27 chr5 122379472 122383081 -80702451 + L1MA2 LINE L1 2866 6442 -1152 2291 75 13 13 chr5 122383081 122383386 -80702146 + AluY SINE Alu 1 305 -6 14705 173 20 27 chr5 122383386 122383793 -80701739 + L1MA2 LINE L1 6442 6851 -743 4925 128 30 11 chr5 122383961 122384805 -80700727 + L1MA2 LINE L1 6858 7717 -6 267 233 22 100 chr5 122384968 122385058 -80700474 - MER101 LTR ERV1 -29 445 363 537 250 91 87 chr5 122385152 122385428 -80700104 - MER101B LTR ERV1 -293 277 1 356 304 89 11 chr5 122386675 122386866 -80698666 + Tigger4(Zombi) DNA MER2_type 741 946 -1785 3748 96 6 41 chr5 122386868 122387479 -80698053 + MER4B LTR ERV1 1 750 -29 3185 156 27 2 chr5 122387479 122387993 -80697539 - MER1A DNA MER1_type 0 527 1 3748 96 6 41 chr5 122387993 122388022 -80697510 + MER4B LTR ERV1 750 778 -1 544 306 71 67 chr5 122388041 122388635 -80696897 + Tigger4(Zombi) DNA MER2_type 975 1570 -1161 2070 150 27 24 chr5 122388846 122389220 -80696312 + THE1C LTR MaLR 1 375 0 442 273 131 33 chr5 122389375 122389558 -80695974 + MER46C DNA MER2_type 135 335 -3 1306 263 16 11 chr5 122389715 122390160 -80695372 - L1M4c LINE L1 -4854 2105 1659 864 169 0 0 chr5 122390207 122390343 -80695189 - Tigger3(Golem) DNA MER2_type -2 3027 2892 356 219 55 0 chr5 122390346 122390419 -80695113 - Tigger3(Golem) DNA MER2_type -2952 77 1 211 216 0 0 chr5 122390420 122390457 -80695075 + (TATATG)n Simple_repeat Simple_repeat 1 37 0 240 133 0 0 chr5 122390457 122390502 -80695030 - LTR66 LTR ERVL -172 438 394 222 267 0 17 chr5 122390515 122390575 -80694957 + (TA)n Simple_repeat Simple_repeat 2 60 0 2948 247 45 11 chr5 122390589 122391833 -80693699 - L1M4c LINE L1 -5255 1604 203 420 291 35 29 chr5 122392609 122392781 -80692751 + MER20B DNA MER1_type 2 174 -609 213 154 0 0 chr5 122392915 122392954 -80692578 + (TG)n Simple_repeat Simple_repeat 2 40 0 1894 196 48 90 chr5 122393481 122394047 -80691485 - MLT1F LTR MaLR 0 542 1 1514 235 0 3 chr5 122394135 122394501 -80691031 - L1M4 LINE L1 -2362 3784 3420 418 308 65 76 chr5 122395471 122395854 -80689678 + L2 LINE L2 2136 2514 -800 184 340 0 0 chr5 122396048 122396101 -80689431 - L2 LINE L2 0 3313 3261 294 282 58 19 chr5 122396446 122396602 -80688930 + MER103 DNA DNA 3 164 -2 288 0 0 0 chr5 122397364 122397396 -80688136 + (CA)n Simple_repeat Simple_repeat 1 32 0 26 0 0 0 chr5 122397448 122397474 -80688058 + AT_rich Low_complexity Low_complexity 1 26 0 2271 92 3 0 chr5 122398587 122398879 -80686653 + AluSg SINE Alu 1 293 -17 251 217 43 0 chr5 122399472 122399564 -80685968 + (TA)n Simple_repeat Simple_repeat 2 97 0 24 32 0 0 chr5 122399740 122399771 -80685761 + AT_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr5 122399943 122399986 -80685546 + AT_rich Low_complexity Low_complexity 1 43 0 2352 103 0 0 chr5 122400131 122400443 -80685089 - AluSq SINE Alu -1 312 1 2657 99 3 0 chr5 122401740 122402094 -80683438 - THE1A LTR MaLR 0 355 1 11158 104 20 0 chr5 122402094 122403643 -80681889 - THE1A-int LTR MaLR 0 1580 1 2727 82 3 0 chr5 122403643 122403997 -80681535 - THE1A LTR MaLR 0 355 1 5685 106 16 25 chr5 122404134 122405102 -80680430 + L1PA13 LINE L1 5190 6148 -15 814 142 31 0 chr5 122406168 122406295 -80679237 + FLAM_C SINE Alu 1 131 -12 290 250 29 0 chr5 122406309 122406377 -80679155 + L2 LINE L2 3240 3309 -4 1896 234 83 39 chr5 122406835 122407352 -80678180 + MLT1F1 LTR MaLR 28 567 0 993 268 166 31 chr5 122407947 122408513 -80677019 + L2 LINE L2 2660 3313 0 29 28 0 0 chr5 122408523 122408559 -80676973 + AT_rich Low_complexity Low_complexity 1 36 0 280 254 53 44 chr5 122408676 122408790 -80676742 - L1ME LINE L1 -497 5624 5510 370 107 36 60 chr5 122409193 122409277 -80676255 + L1MA2 LINE L1 6223 6304 0 315 221 158 11 chr5 122411078 122411173 -80674359 + MIR SINE MIR 45 153 -109 2550 37 0 3 chr5 122411932 122412230 -80673302 + AluY SINE Alu 1 297 -14 779 313 57 6 chr5 122412869 122413185 -80672347 + MER102b DNA MER1_type 1 332 -9 25 0 0 0 chr5 122413205 122413230 -80672302 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 122413509 122413530 -80672002 + AT_rich Low_complexity Low_complexity 1 21 0 3876 206 92 72 chr5 122415158 122416568 -80668964 - Charlie1a DNA MER1_type -5 1450 13 2417 64 0 3 chr5 122416589 122416887 -80668645 - AluY SINE Alu -11 300 4 21 57 0 0 chr5 122417131 122417166 -80668366 + AT_rich Low_complexity Low_complexity 1 35 0 750 285 107 4 chr5 122418404 122418667 -80666865 + L1MC4a LINE L1 5576 5865 -1943 196 360 59 42 chr5 122418972 122419261 -80666271 - L2 LINE L2 -739 2575 2282 766 142 13 77 chr5 122419649 122419804 -80665728 - L1PA16 LINE L1 -21 6145 6001 25 31 0 0 chr5 122419805 122419837 -80665695 + AT_rich Low_complexity Low_complexity 1 32 0 29 0 0 0 chr5 122419884 122419913 -80665619 + AT_rich Low_complexity Low_complexity 1 29 0 311 342 94 42 chr5 122420330 122420809 -80664723 - L2 LINE L2 -686 2628 2125 2052 153 3 12 chr5 122421768 122422114 -80663418 + MER2 DNA MER2_type 1 343 -1 233 321 0 12 chr5 122422117 122422201 -80663331 + MIR SINE MIR 32 114 -148 420 336 23 16 chr5 122422445 122422573 -80662959 - L2 LINE L2 0 3272 3144 667 325 150 16 chr5 122422744 122423197 -80662335 - L2 LINE L2 -371 2943 2430 361 301 108 73 chr5 122423997 122424685 -80660847 - L2 LINE L2 -905 2409 1698 21 0 0 0 chr5 122424849 122424870 -80660662 + AT_rich Low_complexity Low_complexity 1 21 0 300 255 0 0 chr5 122425684 122425786 -80659746 + T-rich Low_complexity Low_complexity 1 102 0 256 100 20 20 chr5 122425889 122425939 -80659593 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 210 338 14 50 chr5 122425998 122426137 -80659395 + MIR SINE MIR 59 192 -70 514 296 128 1 chr5 122426140 122426336 -80659196 + MIR SINE MIR 19 243 -19 25 0 0 0 chr5 122427610 122427635 -80657897 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 122428240 122428263 -80657269 + AT_rich Low_complexity Low_complexity 1 23 0 206 270 183 24 chr5 122429252 122429378 -80656154 + MIR SINE MIR 65 210 -52 1887 120 8 0 chr5 122429917 122430183 -80655349 + AluSg SINE Alu 43 310 0 1057 268 89 61 chr5 122430412 122430838 -80654694 - L2 LINE L2 -14 3299 2862 948 264 23 68 chr5 122430867 122431220 -80654312 - L2 LINE L2 -357 2957 2621 240 174 0 0 chr5 122431240 122431286 -80654246 + L2 LINE L2 2199 2244 -1070 366 229 0 0 chr5 122431292 122431362 -80654170 - Tigger5 DNA MER2_type -4 2319 2250 294 211 0 0 chr5 122431333 122431385 -80654147 - Tigger5 DNA MER2_type -2271 52 1 * 1421 274 137 11 chr5 122431426 122431951 -80653581 + L2 LINE L2 2306 2896 -418 571 245 135 36 chr5 122432045 122432237 -80653295 - MIR SINE MIR 0 262 52 558 250 75 40 chr5 122436845 122437097 -80648435 + L1MC4a LINE L1 2 262 -6280 1186 248 56 13 chr5 122437155 122437721 -80647811 + L1MC4a LINE L1 1818 2498 -4148 732 128 17 17 chr5 122437735 122437876 -80647656 + AluSp/q SINE Alu 170 310 0 553 194 175 23 chr5 122437876 122438181 -80647351 + L1MC4a LINE L1 2510 2866 -3778 431 269 70 47 chr5 122438611 122438782 -80646750 - MIR3 SINE MIR -31 177 3 252 208 255 28 chr5 122439552 122439658 -80645874 + MIR SINE MIR 20 149 -113 185 353 24 24 chr5 122440141 122440226 -80645306 - L2 LINE L2 -2 3311 3227 436 239 22 65 chr5 122440395 122440533 -80644999 - MIR SINE MIR 0 262 131 21 82 0 0 chr5 122440543 122440592 -80644940 + AT_rich Low_complexity Low_complexity 1 49 0 4849 193 52 23 chr5 122441677 122442779 -80642753 + L1MC2 LINE L1 5200 6336 -8 1885 219 86 69 chr5 122442807 122443562 -80641970 - L1MC4a LINE L1 -79 7729 6962 336 318 74 41 chr5 122443589 122444074 -80641458 + L1MC4a LINE L1 2916 3416 -3228 233 262 16 0 chr5 122444089 122444150 -80641382 + L1P LINE L1 2956 3017 -3129 32 26 0 0 chr5 122444150 122444189 -80641343 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 122444427 122444449 -80641083 + AT_rich Low_complexity Low_complexity 1 22 0 1588 258 52 24 chr5 122444550 122445146 -80640386 + L1MC4a LINE L1 5752 6364 -1942 453 233 17 43 chr5 122445585 122445701 -80639831 - L2 LINE L2 -8 3305 3193 1860 177 10 65 chr5 122445780 122446193 -80639339 - MLT1B LTR MaLR 0 390 1 27580 30 0 1 chr5 122446282 122450399 -80635133 + L1PA2 LINE L1 2042 6155 0 4343 87 7 0 chr5 122450426 122451390 -80634142 - L1PA6 LINE L1 -307 5847 4880 * 6894 104 2 1 chr5 122451385 122452381 -80633151 - L1PA6 LINE L1 -3364 2782 1786 1248 89 11 0 chr5 122452372 122452551 -80632981 + L1PA6 LINE L1 1597 1777 -4369 * 301 315 117 38 chr5 122452871 122453084 -80632448 + L2 LINE L2 3084 3313 0 1484 229 34 99 chr5 122453343 122453936 -80631596 + MLT2B3 LTR ERVL 1 554 0 2040 129 111 20 chr5 122453951 122454347 -80631185 - MSTB1 LTR MaLR 0 432 1 187 376 28 18 chr5 122454453 122454562 -80630970 + MIR SINE MIR 20 129 -133 23 55 0 18 chr5 122454562 122454584 -80630948 + AT_rich Low_complexity Low_complexity 1 22 -32 7155 45 6 3 chr5 122454584 122455996 -80629536 - L1PA4 LINE L1 -3 6152 4742 23 55 0 18 chr5 122455996 122456028 -80629504 + AT_rich Low_complexity Low_complexity 22 54 0 427 295 52 52 chr5 122458120 122458388 -80627144 + L1MC/D LINE L1 5417 5684 -2124 206 105 26 0 chr5 122458600 122458638 -80626894 + (TA)n Simple_repeat Simple_repeat 1 39 0 2477 163 7 77 chr5 122459058 122459618 -80625914 - Tigger3(Golem) DNA MER2_type 0 3029 2509 6587 66 12 0 chr5 122459618 122460369 -80625163 - L1PA7 LINE L1 -5 6149 5409 2252 86 3 3 chr5 122460369 122460660 -80624872 - AluY SINE Alu -18 293 3 6587 66 12 0 chr5 122460660 122461546 -80623986 - L1PA7 LINE L1 -745 5409 4504 5305 83 6 0 chr5 122461546 122462271 -80623261 + L1PA7 LINE L1 3765 4493 -1653 1099 91 76 5 chr5 122462271 122462468 -80623064 - Tigger3(Golem) DNA MER2_type -509 2520 2310 5047 129 14 0 chr5 122462945 122463713 -80621819 - L1PA16 LINE L1 -2 6867 6089 8340 177 21 33 chr5 122463848 122468849 -80616683 - L1PB1 LINE L1 -3 6864 1308 3210 207 123 8 chr5 122468860 122469662 -80615870 - L1PB1 LINE L1 -5708 1155 261 9201 225 28 19 chr5 122469663 122471871 -80613661 - L1PA16 LINE L1 -751 6098 3866 2346 127 8 22 chr5 122471871 122472240 -80613292 - THE1B LTR MaLR 0 364 1 9201 225 28 19 chr5 122472240 122472448 -80613084 - L1PA16 LINE L1 -2983 3866 3661 2101 163 74 17 chr5 122472448 122472520 -80613012 + MSTA LTR MaLR 1 67 -361 2396 123 3 38 chr5 122472520 122472911 -80612621 + MER51B LTR ERV1 1 377 0 2101 163 74 17 chr5 122472911 122473243 -80612289 + MSTA LTR MaLR 67 428 0 10258 187 27 51 chr5 122473243 122475988 -80609544 - L1PA16 LINE L1 -3184 3665 959 1235 263 52 36 chr5 122476086 122476470 -80609062 + MLT1F1 LTR MaLR 177 566 -1 201 383 18 30 chr5 122476635 122476649 -80608883 - MIR3 SINE MIR -41 167 154 2402 83 0 0 chr5 122476649 122476949 -80608583 + AluY SINE Alu 2 301 -10 201 383 18 30 chr5 122476949 122477101 -80608431 - MIR3 SINE MIR -54 154 3 22 35 0 0 chr5 122477246 122477275 -80608257 + AT_rich Low_complexity Low_complexity 1 29 0 492 361 70 0 chr5 122477895 122478125 -80607407 + MIR SINE MIR 17 262 0 202 231 0 15 chr5 122478859 122478924 -80606608 + (TA)n Simple_repeat Simple_repeat 2 65 0 244 325 0 12 chr5 122479639 122479722 -80605810 + MLT1K LTR MaLR 40 121 -467 230 245 0 0 chr5 122479930 122479983 -80605549 + (TG)n Simple_repeat Simple_repeat 2 54 0 247 24 0 48 chr5 122480086 122480128 -80605404 + (TTA)n Simple_repeat Simple_repeat 1 40 0 234 200 0 0 chr5 122480534 122480579 -80604953 + L1MC4 LINE L1 6658 6702 -1340 227 218 0 0 chr5 122480545 122480600 -80604932 - L1MC4 LINE L1 -1340 6702 6648 * 384 256 8 48 chr5 122481351 122481476 -80604056 - L2 LINE L2 -67 3246 3127 459 309 67 43 chr5 122482200 122482575 -80602957 + L1M4 LINE L1 2169 2552 -3594 251 287 81 74 chr5 122483173 122483431 -80602101 + L1M4 LINE L1 237 496 -5784 569 274 8 37 chr5 122483455 122483700 -80601832 + L1M4 LINE L1 595 832 -5448 * 5426 136 25 11 chr5 122483692 122484625 -80600907 + L1PA16 LINE L1 5219 6165 -1 2732 195 35 26 chr5 122484645 122485396 -80600136 + L1M4 LINE L1 1259 2092 -4292 1344 306 72 18 chr5 122485390 122485887 -80599645 - L1M4b LINE L1 -5945 914 391 * 987 234 54 29 chr5 122486136 122486620 -80598912 + L1M1 LINE L1 3420 3897 -3668 993 183 0 6 chr5 122486645 122486820 -80598712 - AluJb SINE Alu -17 295 122 1326 249 68 14 chr5 122486820 122487334 -80598198 + L1MD2 LINE L1 4861 5402 -744 477 259 83 96 chr5 122487328 122487641 -80597891 + L1MD2 LINE L1 5927 6235 -124 * 21 57 0 0 chr5 122487656 122487691 -80597841 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 122488101 122488124 -80597408 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 122488124 122488145 -80597387 + (CA)n Simple_repeat Simple_repeat 2 22 0 24 0 0 0 chr5 122490386 122490410 -80595122 + AT_rich Low_complexity Low_complexity 1 24 0 723 157 0 8 chr5 122490410 122490544 -80594988 - L1MA7 LINE L1 -7 6284 6152 305 291 70 54 chr5 122490591 122490849 -80594683 - HAL1 LINE L1 -2237 270 9 204 333 115 18 chr5 122493126 122493291 -80592241 - L2 LINE L2 -1219 2095 1915 21 36 0 0 chr5 122493576 122493604 -80591928 + AT_rich Low_complexity Low_complexity 1 28 0 36 23 0 0 chr5 122493991 122494034 -80591498 + AT_rich Low_complexity Low_complexity 1 43 0 2324 212 29 21 chr5 122495116 122495746 -80589786 + LTR27 LTR ERV1 11 706 -141 243 207 121 0 chr5 122495723 122495781 -80589751 + LTR27 LTR ERV1 570 634 -2 * 511 230 164 49 chr5 122495786 122496012 -80589520 + LTR27-int LTR ERV1 1 252 -6839 738 121 0 0 chr5 122496015 122496131 -80589401 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 905 211 0 6 chr5 122496154 122496329 -80589203 - AluSg/x SINE Alu -2 308 135 4591 182 79 52 chr5 122496335 122497359 -80588173 + LTR27-int LTR ERV1 406 1457 -5634 509 133 0 39 chr5 122497364 122497473 -80588059 + LTR27-int LTR ERV1 2174 4763 -454 385 173 27 13 chr5 122497485 122497560 -80587972 + LTR27-int LTR ERV1 3919 3994 -886 14244 152 48 46 chr5 122497586 122499458 -80586074 + LTR27-int LTR ERV1 632 2498 -4498 1954 141 0 10 chr5 122499458 122499748 -80585784 + AluSx SINE Alu 1 287 -25 14244 152 48 46 chr5 122499748 122502251 -80583281 + LTR27-int LTR ERV1 2498 6995 -1 2294 199 44 26 chr5 122502252 122502884 -80582648 + LTR27 LTR ERV1 3 706 -134 2816 184 93 24 chr5 122503885 122504565 -80580967 + LTR8A LTR ERV1 1 727 0 367 386 51 0 chr5 122504791 122504967 -80580565 + L2 LINE L2 725 909 -2405 399 246 217 22 chr5 122504999 122505137 -80580395 + MIR SINE MIR 7 171 -91 333 291 19 0 chr5 122505161 122505264 -80580268 - MIR SINE MIR -6 256 152 849 317 85 61 chr5 122505651 122506314 -80579218 + L2 LINE L2 1528 2217 -1097 2956 171 74 7 chr5 122506314 122506881 -80578651 + MER6A DNA MER2_type 1 605 0 849 317 85 61 chr5 122506881 122507065 -80578467 + L2 LINE L2 2217 2395 -919 4151 27 0 0 chr5 122507106 122507587 -80577945 + L1PA4 LINE L1 5413 5893 -262 207 100 0 0 chr5 122507615 122507645 -80577887 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 1920 193 30 21 chr5 122507702 122508290 -80577242 - L1MCb LINE L1 -4863 1182 745 889 204 0 6 chr5 122508290 122508457 -80577075 + AluJb SINE Alu 1 166 -146 1064 240 38 38 chr5 122508459 122508776 -80576756 - PABL_B LTR ERV1 -2 665 349 380 317 24 29 chr5 122508784 122508992 -80576540 - PABL_B LTR ERV1 -460 207 1 497 195 0 0 chr5 122508998 122509080 -80576452 + AluJb SINE Alu 181 262 -50 30 27 0 0 chr5 122509106 122509143 -80576389 + AT_rich Low_complexity Low_complexity 1 37 0 2764 227 24 80 chr5 122509210 122509990 -80575542 - L1MCb LINE L1 -5667 897 161 2102 175 36 31 chr5 122510059 122510609 -80574923 - MLT2A2 LTR ERVL 0 554 1 218 264 19 0 chr5 122511542 122511595 -80573937 + CT-rich Low_complexity Low_complexity 2 55 0 889 278 53 76 chr5 122511599 122512128 -80573404 - L1ME3 LINE L1 -24 6138 5622 2246 303 63 38 chr5 122512129 122512995 -80572537 + MER45C DNA AcHobo 1 888 -65 775 274 14 49 chr5 122513045 122513389 -80572143 - L1M1 LINE L1 -542 5628 5290 * 1036 268 106 11 chr5 122513376 122513838 -80571694 - L1ME3 LINE L1 -1197 4949 4444 240 59 0 0 chr5 122514217 122514251 -80571281 + (CA)n Simple_repeat Simple_repeat 1 34 0 915 197 101 107 chr5 122514590 122514935 -80570597 - MER2 DNA MER2_type 0 345 3 394 304 32 8 chr5 122514942 122515067 -80570465 - MIR SINE MIR -26 236 109 1806 162 36 7 chr5 122515201 122515503 -80570029 - AluJb SINE Alu -1 311 1 1571 181 120 3 chr5 122516464 122516813 -80568719 + MLT1B LTR MaLR 1 390 0 4795 229 26 26 chr5 122517755 122518833 -80566699 - L1PA15-16 LINE L1 -1903 4946 3868 2346 127 8 22 chr5 122518833 122519202 -80566330 - THE1B LTR MaLR 0 364 1 4795 229 26 26 chr5 122519202 122519410 -80566122 - L1PA15-16 LINE L1 -2981 3868 3661 2101 163 74 17 chr5 122519410 122519482 -80566050 + MSTA LTR MaLR 1 67 -361 2418 120 3 38 chr5 122519482 122519873 -80565659 + MER51B LTR ERV1 1 377 0 2101 163 74 17 chr5 122519873 122520205 -80565327 + MSTA LTR MaLR 67 428 0 10053 180 77 49 chr5 122520205 122522928 -80562604 - L1PA15-16 LINE L1 -3184 3665 847 1235 263 52 36 chr5 122523027 122523411 -80562121 + MLT1F1 LTR MaLR 177 566 -1 201 383 18 30 chr5 122523576 122523590 -80561942 - MIR3 SINE MIR -41 167 154 2458 77 0 0 chr5 122523590 122523890 -80561642 + AluY SINE Alu 2 301 -10 201 383 18 30 chr5 122523890 122524042 -80561490 - MIR3 SINE MIR -54 154 3 22 35 0 0 chr5 122524187 122524216 -80561316 + AT_rich Low_complexity Low_complexity 1 29 0 492 361 70 0 chr5 122524836 122525066 -80560466 + MIR SINE MIR 17 262 0 202 231 0 15 chr5 122525802 122525867 -80559665 + (TA)n Simple_repeat Simple_repeat 2 65 0 244 325 0 12 chr5 122526582 122526665 -80558867 + MLT1K LTR MaLR 40 121 -467 230 245 0 0 chr5 122526873 122526926 -80558606 + (TG)n Simple_repeat Simple_repeat 2 54 0 225 292 131 29 chr5 122526928 122527022 -80558510 + MLT1K LTR MaLR 419 533 -55 360 0 0 0 chr5 122527022 122527062 -80558470 + (TTA)n Simple_repeat Simple_repeat 1 40 0 225 292 131 29 chr5 122527062 122527104 -80558428 + MLT1K LTR MaLR 533 569 -19 234 200 0 0 chr5 122527470 122527515 -80558017 + L1MC4 LINE L1 6658 6702 -1340 227 218 0 0 chr5 122527481 122527536 -80557996 - L1MC4 LINE L1 -1340 6702 6648 * 384 256 8 48 chr5 122528256 122528381 -80557151 - L2 LINE L2 -67 3246 3127 452 299 72 48 chr5 122529105 122529480 -80556052 + L1M4 LINE L1 2169 2552 -3594 232 167 0 56 chr5 122529521 122529575 -80555957 + L1M4 LINE L1 72 122 -6420 692 214 7 0 chr5 122529784 122529929 -80555603 + MLT1B LTR MaLR 160 305 -85 24 32 0 0 chr5 122531111 122531142 -80554390 + AT_rich Low_complexity Low_complexity 1 31 0 412 304 29 0 chr5 122531142 122531280 -80554252 - L2 LINE L2 -5 3308 3167 301 274 45 44 chr5 122531328 122531541 -80553991 + L1ME4a LINE L1 5674 5891 -230 1111 258 30 12 chr5 122531905 122532242 -80553290 - L1ME2 LINE L1 -62 6102 5760 12797 168 21 12 chr5 122532377 122535288 -80550244 - L1MA2 LINE L1 -83 6221 3278 1838 85 0 12 chr5 122535288 122535535 -80549997 - AluY SINE Alu -3 308 65 12797 168 21 12 chr5 122535535 122536200 -80549332 - L1MA2 LINE L1 -3026 3278 2621 2479 210 12 10 chr5 122536235 122536716 -80548816 - L1MCa LINE L1 -5938 488 7 982 204 96 4 chr5 122536699 122536929 -80548603 + MLT1B-int LTR MaLR 1120 1370 -1 * 1712 170 38 51 chr5 122536930 122537325 -80548207 + MLT1B LTR MaLR 1 390 0 582 326 67 19 chr5 122537542 122537812 -80547720 - L1MEc LINE L1 -6080 316 34 391 287 177 6 chr5 122538244 122538425 -80547107 + MIR SINE MIR 38 249 -13 203 247 0 24 chr5 122538925 122539010 -80546522 + GA-rich Low_complexity Low_complexity 2 84 0 206 283 175 16 chr5 122539107 122539235 -80546297 - MIR SINE MIR -62 146 36 1186 313 44 7 chr5 122539277 122539689 -80545843 - LTR16A LTR ERVL -6 444 18 291 36 18 36 chr5 122540324 122540379 -80545153 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 2157 130 0 3 chr5 122540381 122540680 -80544852 - AluSq SINE Alu -15 298 1 180 368 0 11 chr5 122540982 122541077 -80544455 + MIR SINE MIR 167 260 -2 2244 66 0 24 chr5 122541851 122542140 -80543392 - AluSg SINE Alu -28 282 1 690 320 202 8 chr5 122542464 122543040 -80542492 - L2 LINE L2 -4 3309 2607 23 0 0 0 chr5 122543239 122543262 -80542270 + AT_rich Low_complexity Low_complexity 1 23 0 771 174 0 0 chr5 122543266 122543387 -80542145 + FLAM_C SINE Alu 4 124 -19 22 35 0 0 chr5 122545185 122545214 -80540318 + AT_rich Low_complexity Low_complexity 1 29 0 1418 60 0 11 chr5 122546100 122546283 -80539249 - L1PA6 LINE L1 -8 6146 5966 270 309 27 9 chr5 122546682 122546792 -80538740 + L1MC/D LINE L1 5630 5741 -501 1518 252 102 36 chr5 122546805 122547385 -80538147 - L2 LINE L2 -734 2580 1963 2073 118 3 0 chr5 122547393 122547680 -80537852 + AluSg SINE Alu 1 288 -22 13356 33 3 1 chr5 122548205 122550369 -80535163 - L1PA4 LINE L1 -222 5933 3765 6545 66 17 12 chr5 122550369 122551255 -80534277 + L1PA7 LINE L1 4504 5401 -753 2302 82 3 3 chr5 122551255 122551546 -80533986 + AluY SINE Alu 3 293 -18 6545 66 17 12 chr5 122551546 122552299 -80533233 + L1PA7 LINE L1 5401 6149 -5 1376 157 11 167 chr5 122552299 122552916 -80532616 + Tigger3(Golem) DNA MER2_type 2509 3029 0 767 308 106 46 chr5 122553256 122553869 -80531663 + L2 LINE L2 1559 2208 -1106 190 349 18 46 chr5 122553970 122554079 -80531453 + MIR SINE MIR 35 140 -122 39 50 0 0 chr5 122554162 122554222 -80531310 + AT_rich Low_complexity Low_complexity 1 60 0 747 178 0 23 chr5 122554417 122554546 -80530986 - FRAM SINE Alu -23 153 28 292 274 117 50 chr5 122554592 122554771 -80530761 - MLT1J2 LTR MaLR -167 283 93 297 328 140 7 chr5 122555330 122555788 -80529744 - HAL1 LINE L1 -588 1919 1401 1309 234 202 83 chr5 122556240 122556942 -80528590 - LTR50 LTR ERVL -2 793 8 2508 52 0 0 chr5 122557429 122557734 -80527798 + AluY SINE Alu 1 305 -6 804 267 14 18 chr5 122558816 122559033 -80526499 + MIR SINE MIR 41 256 -6 23 54 0 0 chr5 122560538 122560575 -80524957 + AT_rich Low_complexity Low_complexity 1 37 0 298 275 113 31 chr5 122561776 122561936 -80523596 - HERV16 LTR ERVL -316 4680 4508 278 174 0 0 chr5 122561946 122561992 -80523540 + L1MC4 LINE L1 7856 7901 -141 720 299 26 49 chr5 122562037 122562422 -80523110 - L1MEc LINE L1 -2507 3708 3333 343 307 74 43 chr5 122562426 122562589 -80522943 - MLT2E LTR ERVL -7 621 454 199 122 41 20 chr5 122562773 122562822 -80522710 + T-rich Low_complexity Low_complexity 2 51 0 3023 317 73 15 chr5 122564518 122565824 -80519708 + ERVL LTR ERVL 3901 5282 -482 406 285 76 6 chr5 122565857 122566029 -80519503 - L1MEc LINE L1 -4738 1658 1475 528 68 11 23 chr5 122566041 122566129 -80519403 + (TTCC)n Simple_repeat Simple_repeat 1 87 0 243 196 0 77 chr5 122566165 122566308 -80519224 + CT-rich Low_complexity Low_complexity 3 134 0 * 388 227 35 47 chr5 122566229 122566401 -80519131 + (CCCTA)n Simple_repeat Simple_repeat 4 173 0 250 177 0 16 chr5 122566373 122566435 -80519097 + (CATAC)n Simple_repeat Simple_repeat 4 64 0 * 3170 52 2 20 chr5 122566767 122567205 -80518327 - L1P LINE L1 -1652 4494 4065 * 20597 42 3 4 chr5 122567203 122570917 -80514615 + L1PA5 LINE L1 2445 6154 0 813 196 12 12 chr5 122571445 122571608 -80513924 - FRAM SINE Alu -12 164 2 281 262 183 0 chr5 122572507 122572633 -80512899 - L1MD2 LINE L1 -17 6342 6194 215 31 31 0 chr5 122572651 122572683 -80512849 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1277 175 24 0 chr5 122573436 122573682 -80511850 - Tigger2 DNA MER2_type -3 2715 2464 23 0 0 0 chr5 122573913 122573936 -80511596 + AT_rich Low_complexity Low_complexity 1 23 0 2185 65 55 3 chr5 122573969 122574259 -80511273 - AluY SINE Alu -6 305 1 921 252 37 4 chr5 122575537 122575783 -80509749 + MIR SINE MIR 9 262 0 274 332 142 54 chr5 122576049 122576254 -80509278 + L2 LINE L2 3045 3267 -5 1681 184 25 31 chr5 122576343 122576696 -80508836 - MLT1A1 LTR MaLR -4 361 11 2909 209 29 13 chr5 122576711 122577343 -80508189 - MLT1A1-int LTR MaLR -2 1733 1092 1485 224 23 12 chr5 122577346 122577689 -80507843 + MLT1A1 LTR MaLR 17 363 -2 2235 108 3 3 chr5 122578329 122578626 -80506906 - AluSq SINE Alu -14 299 3 251 318 48 16 chr5 122579895 122580021 -80505511 + L2 LINE L2 608 737 -2577 213 333 0 0 chr5 122581202 122581268 -80504264 + GA-rich Low_complexity Low_complexity 1 66 0 1569 45 2 5 chr5 122581461 122581674 -80503858 - L1PA3 LINE L1 -210 5945 5736 21 0 0 0 chr5 122582154 122582175 -80503357 + AT_rich Low_complexity Low_complexity 1 21 0 1061 320 17 19 chr5 122582379 122582848 -80502684 + L1MEc LINE L1 251 718 -5678 234 165 59 71 chr5 122582854 122582939 -80502593 + L1M4 LINE L1 3130 3213 -2933 * 9818 176 14 16 chr5 122582929 122585598 -80499934 + L1PB1 LINE L1 2926 5590 -561 2120 122 7 0 chr5 122585598 122585893 -80499639 - AluSc SINE Alu -11 298 2 9818 176 14 16 chr5 122585893 122586448 -80499084 + L1PB1 LINE L1 5590 6144 -7 363 317 62 23 chr5 122586453 122586762 -80498770 + L1M4 LINE L1 3196 3516 -2630 1601 160 26 45 chr5 122586778 122587091 -80498441 + AluJo SINE Alu 5 311 -1 699 301 35 29 chr5 122587097 122587409 -80498123 - LTR40c LTR ERVL -5 460 147 26 0 0 0 chr5 122587409 122587435 -80498097 + AT_rich Low_complexity Low_complexity 1 26 0 253 314 237 39 chr5 122587806 122588526 -80497006 - L2 LINE L2 -657 2657 1782 3396 100 33 8 chr5 122588526 122589048 -80496484 - L1PA10 LINE L1 0 6168 5634 253 314 237 39 chr5 122589048 122589075 -80496457 - L2 LINE L2 -1532 1782 1762 233 326 194 0 chr5 122589189 122589287 -80496245 - MIR SINE MIR -138 124 8 298 302 0 34 chr5 122589962 122590111 -80495421 + CT-rich Low_complexity Low_complexity 3 146 0 26 50 0 0 chr5 122591016 122591056 -80494476 + AT_rich Low_complexity Low_complexity 1 40 0 931 271 56 86 chr5 122591918 122592490 -80493042 - LTR67 LTR ERVL 0 557 3 397 256 60 117 chr5 122592686 122593038 -80492494 + MLT1J LTR MaLR 1 332 -118 252 0 0 0 chr5 122593154 122593182 -80492350 + (CA)n Simple_repeat Simple_repeat 2 29 0 255 304 13 0 chr5 122593214 122593293 -80492239 + L2 LINE L2 2447 2526 -788 845 160 0 0 chr5 122593412 122593543 -80491989 - FLAM_C SINE Alu 0 133 3 803 72 18 0 chr5 122593581 122593692 -80491840 - L1PA10 LINE L1 -5 6163 6051 427 308 87 0 chr5 122594587 122594759 -80490773 - LTR16A LTR ERVL -6 444 258 786 257 149 25 chr5 122594808 122595332 -80490200 + MLT1H1 LTR MaLR 1 544 -11 597 202 156 6 chr5 122596127 122596300 -80489232 - MLT1A1 LTR MaLR 0 365 167 251 239 148 0 chr5 122596356 122596444 -80489088 - MLT1A1 LTR MaLR -190 175 75 305 212 26 106 chr5 122596723 122596836 -80488696 - MIR SINE MIR -70 138 35 249 310 41 14 chr5 122597590 122597735 -80487797 - LTR67 LTR ERVL -10 547 399 551 318 92 0 chr5 122598020 122598237 -80487295 - MIR SINE MIR -6 256 20 21 57 0 0 chr5 122598463 122598498 -80487034 + AT_rich Low_complexity Low_complexity 1 35 0 457 352 35 22 chr5 122598719 122598949 -80486583 - L2 LINE L2 -453 2861 2629 1781 165 108 35 chr5 122599075 122599227 -80486305 + MSTB1 LTR MaLR 3 143 -289 2055 154 3 0 chr5 122599227 122599525 -80486007 - AluSx SINE Alu -11 301 3 1781 165 108 35 chr5 122599525 122599771 -80485761 + MSTB1 LTR MaLR 143 430 -2 806 289 40 9 chr5 122600668 122600896 -80484636 + MIR SINE MIR 27 261 -1 2996 101 46 2 chr5 122600913 122601304 -80484228 + MLT2A2 LTR ERVL 1 414 -39 215 40 60 20 chr5 122601304 122601354 -80484178 + (TA)n Simple_repeat Simple_repeat 2 53 0 2996 101 46 2 chr5 122601354 122601396 -80484136 + MLT2A2 LTR ERVL 414 453 0 247 360 61 18 chr5 122601478 122601500 -80484032 + L2 LINE L2 3154 3174 -98 2421 125 13 13 chr5 122601500 122601875 -80483657 - THE1C LTR MaLR 0 375 1 247 360 61 18 chr5 122601875 122601966 -80483566 + L2 LINE L2 3174 3272 0 1241 167 42 0 chr5 122602057 122602272 -80483260 - MLT1A1 LTR MaLR 0 365 142 289 217 52 70 chr5 122602331 122602446 -80483086 - L1MA9 LINE L1 -38 6274 6162 715 142 0 22 chr5 122602449 122602577 -80482955 - MLT1A1 LTR MaLR -205 160 35 1726 145 0 0 chr5 122602577 122602853 -80482679 + L1PB1 LINE L1 5868 6143 -8 261 0 0 0 chr5 122602884 122602913 -80482619 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 251 128 43 0 chr5 122602913 122602960 -80482572 - MLT1A1 LTR MaLR -316 49 1 220 284 32 32 chr5 122603051 122603146 -80482386 - MIR SINE MIR -44 218 124 251 191 5 223 chr5 122603211 122603265 -80482267 + MIR SINE MIR 45 109 -153 1926 165 35 19 chr5 122603265 122603634 -80481898 + THE1C LTR MaLR 1 375 0 251 191 5 223 chr5 122603634 122603714 -80481818 + MIR SINE MIR 109 129 -133 2744 46 43 46 chr5 122603714 122604105 -80481427 + L1PA8 LINE L1 5782 6171 -1 251 191 5 223 chr5 122604105 122604157 -80481375 + MIR SINE MIR 129 191 -71 596 283 20 0 chr5 122604660 122604812 -80480720 + MER5B DNA MER1_type 1 155 -23 675 180 77 2 chr5 122606052 122606337 -80479195 + MLT1A2 LTR MaLR 3 372 -2 21 0 0 0 chr5 122606538 122606559 -80478973 + AT_rich Low_complexity Low_complexity 1 21 0 1832 151 24 0 chr5 122607779 122608070 -80477462 - AluSx SINE Alu -12 300 3 2215 102 10 0 chr5 122608290 122608584 -80476948 + AluSp SINE Alu 2 298 -15 22 0 0 0 chr5 122610190 122610212 -80475320 + AT_rich Low_complexity Low_complexity 1 22 0 278 290 65 11 chr5 122610755 122610848 -80474684 + MLT1L LTR MaLR 1 98 -517 311 189 0 14 chr5 122611131 122611205 -80474327 + GA-rich Low_complexity Low_complexity 4 76 0 366 305 30 12 chr5 122611259 122611426 -80474106 + GA-rich Low_complexity Low_complexity 4 173 0 1767 49 0 0 chr5 122611762 122611967 -80473565 - AluY SINE Alu -106 205 1 274 119 0 0 chr5 122611967 122612009 -80473523 + MSTA LTR MaLR 387 428 0 983 230 61 52 chr5 122612009 122612335 -80473197 + L1ME2 LINE L1 5826 6154 -10 3002 282 32 25 chr5 122613873 122614168 -80471364 + ERVL LTR ERVL 4007 4299 -1465 2029 130 54 122 chr5 122614168 122614277 -80471255 - LTR47A LTR ERVL 0 452 337 1753 183 3 3 chr5 122614277 122614583 -80470949 + AluJb SINE Alu 6 311 -1 2029 130 54 122 chr5 122614583 122614958 -80470574 - LTR47A LTR ERVL -115 337 1 3002 282 32 25 chr5 122614958 122615719 -80469813 + ERVL LTR ERVL 4299 5070 -694 658 274 171 22 chr5 122615781 122616143 -80469389 + LTR50 LTR ERVL 122 537 -258 396 300 100 7 chr5 122617230 122617370 -80468162 - MIR SINE MIR -81 181 29 21 0 0 0 chr5 122617793 122617814 -80467718 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr5 122618078 122618101 -80467431 + (CA)n Simple_repeat Simple_repeat 2 24 0 250 281 0 0 chr5 122618213 122618295 -80467237 - L1M4 LINE L1 -3146 3000 2919 813 214 30 0 chr5 122618342 122618543 -80466989 - L1MA6 LINE L1 -4 6296 6090 2953 155 28 8 chr5 122618541 122619070 -80466462 + L1MA6 LINE L1 5492 6031 -269 24 32 0 0 chr5 122619085 122619116 -80466416 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 122619706 122619734 -80465798 + AT_rich Low_complexity Low_complexity 1 28 0 390 346 107 29 chr5 122619806 122620049 -80465483 + L2 LINE L2 2531 2792 -522 1185 122 11 0 chr5 122620054 122620235 -80465297 + L1MC1 LINE L1 6145 6327 -6 2313 100 0 0 chr5 122620653 122620953 -80464579 - AluSc SINE Alu -7 302 3 9562 160 44 20 chr5 122620984 122621299 -80464233 - L1PB2 LINE L1 -7 6144 5838 382 63 16 16 chr5 122621299 122621362 -80464170 + (TA)n Simple_repeat Simple_repeat 1 63 0 9562 160 44 20 chr5 122621362 122622706 -80462826 - L1PB2 LINE L1 -313 5838 4528 183 42 0 0 chr5 122622706 122622730 -80462802 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9562 160 44 20 chr5 122622730 122622957 -80462575 - L1PB2 LINE L1 -1623 4528 4308 2302 107 0 0 chr5 122622957 122623265 -80462267 - AluSc SINE Alu -1 308 1 9562 160 44 20 chr5 122623265 122624168 -80461364 - L1PB2 LINE L1 -1843 4308 3289 23 54 0 0 chr5 122624356 122624393 -80461139 + AT_rich Low_complexity Low_complexity 1 37 0 2697 10 0 0 chr5 122624399 122624707 -80460825 - L1HS LINE L1 0 6155 5848 236 283 0 54 chr5 122624978 122625070 -80460462 + MLT1L LTR MaLR 3 89 -526 331 287 101 38 chr5 122625082 122625319 -80460213 + MLT1L LTR MaLR 304 555 -60 1256 140 48 5 chr5 122625360 122625567 -80459965 - AluSg/x SINE Alu -11 301 86 377 248 83 0 chr5 122626484 122626593 -80458939 - Charlie1 DNA MER1_type 0 2761 2644 242 250 0 104 chr5 122626612 122626708 -80458824 - Charlie1 DNA MER1_type -2674 87 2 207 232 0 0 chr5 122628658 122628714 -80456818 + (CA)n Simple_repeat Simple_repeat 2 57 0 402 246 41 33 chr5 122628860 122628982 -80456550 + L2 LINE L2 3191 3313 0 240 35 0 0 chr5 122629327 122629356 -80456176 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 749 204 87 17 chr5 122630441 122630613 -80454919 - MER5A DNA MER1_type -5 184 1 1146 178 216 24 chr5 122631695 122632111 -80453421 - LTR54B LTR ERV1 -2 496 1 1354 211 105 54 chr5 122632121 122632677 -80452855 - LTR24B LTR ERV1 -1 634 2 889 229 103 5 chr5 122633119 122633333 -80452199 - MER8 DNA MER2_type -4 235 1 479 287 104 40 chr5 122633892 122634371 -80451161 + L1MC/D LINE L1 5259 5757 -450 185 217 50 83 chr5 122634866 122634926 -80450606 - L3b LINE CR1 -136 1447 1390 255 93 0 0 chr5 122635562 122635605 -80449927 + (A)n Simple_repeat Simple_repeat 1 43 0 183 333 25 0 chr5 122635948 122636029 -80449503 + MIR3 SINE MIR 118 200 -8 748 166 0 36 chr5 122636311 122636450 -80449082 - AluJo SINE Alu -178 134 1 1141 195 0 0 chr5 122637457 122637662 -80447870 - MER3 DNA MER1_type -4 205 1 1905 125 29 0 chr5 122640385 122640666 -80444866 - AluSx SINE Alu -19 293 5 234 319 83 25 chr5 122641541 122641698 -80443834 + MER112 DNA MER1_type 1 166 -94 200 354 104 31 chr5 122641773 122641869 -80443663 + L2 LINE L2 3136 3238 -34 22 0 0 0 chr5 122643030 122643052 -80442480 + AT_rich Low_complexity Low_complexity 1 22 0 27 62 0 0 chr5 122643757 122643805 -80441727 + AT_rich Low_complexity Low_complexity 1 48 0 203 290 74 68 chr5 122643939 122644101 -80441431 - MIR3 SINE MIR -11 197 35 392 325 189 0 chr5 122645774 122645980 -80439552 - MIR SINE MIR -7 255 11 240 294 98 0 chr5 122646404 122646496 -80439036 - MIR SINE MIR -10 252 152 22 56 0 0 chr5 122647196 122647232 -80438300 + AT_rich Low_complexity Low_complexity 1 36 0 2032 126 3 23 chr5 122647256 122647566 -80437966 + AluSx SINE Alu 1 304 -8 491 215 104 43 chr5 122648021 122648184 -80437348 + MIR SINE MIR 64 236 -26 2300 149 56 20 chr5 122649491 122649900 -80435632 + MSTC LTR MaLR 4 427 -1 347 149 14 0 chr5 122650450 122650524 -80435008 + (TA)n Simple_repeat Simple_repeat 2 76 0 536 277 87 35 chr5 122654668 122654899 -80430633 + MIR SINE MIR 19 261 -1 2908 204 62 6 chr5 122655125 122655222 -80430310 + L1M4 LINE L1 4256 4346 -1800 316 20 41 20 chr5 122655222 122655271 -80430261 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 2908 204 62 6 chr5 122655271 122655950 -80429582 + L1M4 LINE L1 4346 5090 -1056 201 387 40 0 chr5 122656255 122656330 -80429202 - L2 LINE L2 -18 3295 3218 550 101 18 73 chr5 122656365 122656474 -80429058 - L1MA8 LINE L1 -4 6287 6185 361 330 92 5 chr5 122656670 122656855 -80428677 - L2 LINE L2 -458 2856 2656 22 94 0 0 chr5 122657595 122657659 -80427873 + AT_rich Low_complexity Low_complexity 1 64 0 252 300 122 11 chr5 122660356 122660446 -80425086 - L2 LINE L2 -21 3292 3193 25 0 0 0 chr5 122661500 122661525 -80424007 + AT_rich Low_complexity Low_complexity 1 25 0 198 149 21 43 chr5 122661716 122661763 -80423769 + L2 LINE L2 3267 3312 -1 1304 186 76 50 chr5 122662338 122662655 -80422877 + MER2 DNA MER2_type 2 326 -19 25 31 0 0 chr5 122662930 122662962 -80422570 + AT_rich Low_complexity Low_complexity 1 32 0 321 47 0 0 chr5 122664020 122664063 -80421469 + (A)n Simple_repeat Simple_repeat 1 43 0 581 275 50 16 chr5 122665238 122665475 -80420057 + LTR33 LTR ERVL 241 486 -37 27 0 0 0 chr5 122666512 122666539 -80418993 + AT_rich Low_complexity Low_complexity 1 27 0 187 307 140 35 chr5 122666665 122666779 -80418753 - L3 LINE CR1 -1 1576 1451 2177 113 0 0 chr5 122666779 122667072 -80418460 - AluSx SINE Alu -8 304 12 306 324 85 17 chr5 122667159 122667335 -80418197 - L3 LINE CR1 -253 1324 1137 1629 203 173 26 chr5 122667664 122667741 -80417791 + L1MC4 LINE L1 7074 7138 -904 1245 178 26 4 chr5 122667741 122667971 -80417561 - MER46A DNA MER2_type -1 235 1 1629 203 173 26 chr5 122667971 122668435 -80417097 + L1MC4 LINE L1 7138 7695 -347 1317 233 26 30 chr5 122668780 122669119 -80416413 - MER58B DNA MER1_type -1 340 3 701 243 90 6 chr5 122669126 122669303 -80416229 + MIR SINE MIR 69 260 -2 288 245 47 28 chr5 122670163 122670269 -80415263 - L2 LINE L2 -89 3224 3117 477 169 62 15 chr5 122671473 122671603 -80413929 + L1MC5 LINE L1 7611 7746 -215 40716 35 22 1 chr5 122672596 122678625 -80406907 + L1PA3 LINE L1 2 6155 0 457 246 36 66 chr5 122678651 122678818 -80406714 + L2 LINE L2 3140 3301 -12 565 287 38 45 chr5 122679025 122679314 -80406218 + MLT1I LTR MaLR 106 392 -17 189 267 0 0 chr5 122679515 122679560 -80405972 + L2 LINE L2 3228 3272 0 2170 100 0 17 chr5 122679633 122679924 -80405608 + AluSc SINE Alu 1 286 -23 2564 47 0 0 chr5 122680214 122680511 -80405021 + AluY SINE Alu 1 297 -14 815 179 122 144 chr5 122680808 122681211 -80404321 - MLT1A1 LTR MaLR -2 363 1 405 252 206 7 chr5 122682127 122682282 -80403250 + MIR SINE MIR 71 256 -6 2573 263 72 31 chr5 122682530 122683627 -80401905 - L1MEc LINE L1 -4931 1465 324 213 259 147 56 chr5 122683793 122683936 -80401596 - MIR SINE MIR -3 259 104 358 230 235 40 chr5 122684505 122684705 -80400827 + L3 LINE CR1 624 862 -715 2421 72 0 3 chr5 122685044 122685349 -80400183 - AluY SINE Alu -7 304 1 25 31 0 0 chr5 122685720 122685752 -80399780 + AT_rich Low_complexity Low_complexity 1 32 0 214 398 44 0 chr5 122686039 122686152 -80399380 + L2 LINE L2 3138 3255 -17 202 303 180 0 chr5 122687711 122687800 -80397732 + L2 LINE L2 2960 3064 -208 200 286 57 43 chr5 122687889 122687959 -80397573 + L2 LINE L2 3243 3313 0 2283 93 38 0 chr5 122688587 122688877 -80396655 + AluSg SINE Alu 1 301 -9 852 248 46 34 chr5 122689025 122689263 -80396269 - MIR SINE MIR -16 246 6 220 319 0 14 chr5 122689482 122689551 -80395981 - MER5A DNA MER1_type -65 124 57 232 266 0 32 chr5 122695256 122695350 -80390182 + CT-rich Low_complexity Low_complexity 2 92 0 1030 287 73 19 chr5 122696361 122696747 -80388785 + LTR33 LTR ERVL 1 402 -121 327 235 0 12 chr5 122696757 122696838 -80388694 - MER94 DNA DNA -19 115 36 358 216 11 11 chr5 122696937 122697025 -80388507 + LTR33 LTR ERVL 434 521 0 2077 133 3 3 chr5 122697816 122698117 -80387415 - AluSx SINE Alu -10 302 2 962 206 0 38 chr5 122698121 122698330 -80387202 + MER58A DNA MER1_type 24 224 0 22 56 0 0 chr5 122699241 122699277 -80386255 + AT_rich Low_complexity Low_complexity 1 36 0 1525 191 89 20 chr5 122699729 122700079 -80385453 - MLT1A2 LTR MaLR 0 374 1 1532 190 14 21 chr5 122700347 122700626 -80384906 - AluJo SINE Alu -21 291 15 228 239 0 14 chr5 122700686 122700757 -80384775 + L1MC4 LINE L1 7732 7801 -241 220 137 39 0 chr5 122700795 122700846 -80384686 + GA-rich Low_complexity Low_complexity 2 54 0 232 226 19 0 chr5 122701152 122701205 -80384327 + (TA)n Simple_repeat Simple_repeat 2 55 0 613 257 63 111 chr5 122701217 122701891 -80383641 - L1MC4a LINE L1 -1849 6028 5391 1622 89 27 13 chr5 122701891 122702116 -80383416 - MER30 DNA MER1_type -2 228 1 613 257 63 111 chr5 122702116 122702181 -80383351 - L1MC4a LINE L1 -2486 5391 5324 22 80 0 0 chr5 122702467 122702517 -80383015 + AT_rich Low_complexity Low_complexity 1 50 0 3292 245 65 48 chr5 122702625 122702811 -80382721 - L1MC4a LINE L1 -3904 2492 2311 1876 135 0 21 chr5 122702811 122703099 -80382433 - AluSx SINE Alu -24 288 7 3292 245 65 48 chr5 122703099 122703949 -80381583 - L1MC4a LINE L1 -4085 2311 1413 2139 47 0 87 chr5 122703949 122704248 -80381284 + AluY SINE Alu 34 306 -5 3292 245 65 48 chr5 122704248 122704937 -80380595 - L1MC4a LINE L1 -4983 1413 737 313 109 0 0 chr5 122705003 122705049 -80380483 + L1P3 LINE L1 582 627 -5248 900 268 78 0 chr5 122705069 122705375 -80380157 - L1MC4a LINE L1 -5663 733 404 398 245 20 41 chr5 122705375 122705473 -80380059 + MIR SINE MIR 7 102 -160 856 210 68 5 chr5 122705473 122705678 -80379854 + Tigger7 DNA MER2_type 1 218 -2269 24616 135 10 12 chr5 122705678 122706979 -80378553 + L1PA8A LINE L1 1086 2389 -4057 2170 106 0 59 chr5 122706979 122707301 -80378231 + AluSc SINE Alu 1 303 -6 24616 135 10 12 chr5 122707301 122711364 -80374168 + L1PA8A LINE L1 2389 6440 -6 25 0 0 0 chr5 122711364 122711389 -80374143 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr5 122711619 122711643 -80373889 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 304 280 40 10 chr5 122712601 122712701 -80372831 + MIR3 SINE MIR 105 207 -1 1805 136 0 4 chr5 122712717 122712982 -80372550 + AluSq SINE Alu 49 312 -1 1003 261 37 0 chr5 122713146 122713387 -80372145 - MIR SINE MIR -10 252 3 189 352 9 0 chr5 122713527 122713632 -80371900 - MIR SINE MIR -7 255 150 341 368 7 13 chr5 122713704 122713859 -80371673 - MIR SINE MIR -107 155 2 396 209 99 0 chr5 122714009 122714100 -80371432 + MER5A DNA MER1_type 10 109 -80 3526 17 0 0 chr5 122714151 122714554 -80370978 + L1PA2 LINE L1 5749 6151 -4 2345 59 28 0 chr5 122714676 122714963 -80370569 - AluY SINE Alu -16 295 1 221 394 20 31 chr5 122718469 122718723 -80366809 + L3 LINE CR1 1212 1462 -115 26 50 0 0 chr5 122718819 122718859 -80366673 + AT_rich Low_complexity Low_complexity 1 40 0 3385 128 27 21 chr5 122719044 122719568 -80365964 + MER1A DNA MER1_type 1 527 0 202 237 17 34 chr5 122719953 122720012 -80365520 - L2 LINE L2 -1 3271 3214 12027 154 39 20 chr5 122720427 122721034 -80364498 + Tigger1 DNA MER2_type 20 614 -1804 657 199 119 6 chr5 122721034 122721210 -80364322 + L1P LINE L1 4912 5107 -1039 12027 154 39 20 chr5 122721210 122721221 -80364311 + Tigger1 DNA MER2_type 614 623 -1795 2058 146 10 0 chr5 122721221 122721529 -80364003 + AluSx SINE Alu 1 311 -1 12027 154 39 20 chr5 122721529 122722986 -80362546 + Tigger1 DNA MER2_type 623 2313 -105 7610 27 0 0 chr5 122723024 122724299 -80361233 - L1PA3 LINE L1 -3 6152 4877 261 167 21 0 chr5 122724299 122724347 -80361185 + Tigger1 DNA MER2_type 2301 2349 -69 1690 185 7 17 chr5 122724772 122725069 -80360463 - AluJo SINE Alu -18 294 1 327 272 52 88 chr5 122725076 122725427 -80360105 - L1ME LINE L1 -299 5822 5492 3248 160 22 30 chr5 122725492 122726136 -80359396 - L1MB2 LINE L1 -4 6167 5529 5402 172 21 23 chr5 122726136 122727301 -80358231 + L1MA10 LINE L1 5173 6331 -3 21 0 0 0 chr5 122727547 122727568 -80357964 + AT_rich Low_complexity Low_complexity 1 21 0 42838 48 7 1 chr5 122727649 122733768 -80351764 - L1PA4 LINE L1 -3 6152 2 1013 273 89 48 chr5 122734216 122734803 -80350729 + L1MC4a LINE L1 5314 5924 -1884 306 337 10 0 chr5 122734836 122734934 -80350598 + MER94 DNA DNA 23 121 -13 696 123 6 45 chr5 122734934 122735113 -80350419 + (TCTA)n Simple_repeat Simple_repeat 2 173 0 2250 155 41 7 chr5 122735555 122735967 -80349565 + MSTC LTR MaLR 1 426 -2 2161 118 0 3 chr5 122736109 122736406 -80349126 - AluSg SINE Alu -14 296 1 246 268 45 45 chr5 122736512 122736624 -80348908 - MER103 DNA DNA -46 120 9 1430 193 70 48 chr5 122737237 122737445 -80348087 - MLT1A1 LTR MaLR 0 365 163 396 55 0 0 chr5 122737445 122737500 -80348032 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2124 99 0 21 chr5 122737501 122737785 -80347747 - AluY SINE Alu -31 280 3 1430 193 70 48 chr5 122737785 122737931 -80347601 - MLT1A1 LTR MaLR -201 164 1 490 270 122 48 chr5 122738183 122738413 -80347119 + MIR SINE MIR 16 262 0 359 333 164 18 chr5 122739706 122740096 -80345436 + L2 LINE L2 2826 3272 0 818 267 34 6 chr5 122740502 122740678 -80344854 + MER5A DNA MER1_type 9 189 0 186 224 0 0 chr5 122741826 122741875 -80343657 + CT-rich Low_complexity Low_complexity 4 52 0 24 0 0 0 chr5 122742386 122742410 -80343122 + AT_rich Low_complexity Low_complexity 1 24 0 311 324 110 14 chr5 122742657 122742802 -80342730 - L1ME LINE L1 -320 5850 5692 338 332 74 35 chr5 122742816 122743106 -80342426 - L1MEc LINE L1 -814 1762 1447 204 270 6 55 chr5 122743272 122743435 -80342097 + T-rich Low_complexity Low_complexity 5 159 0 843 208 36 0 chr5 122744646 122744814 -80340718 - FAM SINE Alu -1 174 1 234 194 301 11 chr5 122745131 122745224 -80340308 + MIR SINE MIR 66 185 -77 26 0 0 0 chr5 122745270 122745296 -80340236 + AT_rich Low_complexity Low_complexity 1 26 0 229 292 28 21 chr5 122745736 122745880 -80339652 - L1ME LINE L1 -273 5848 5704 312 27 0 0 chr5 122746580 122746617 -80338915 + (TG)n Simple_repeat Simple_repeat 2 38 0 445 248 74 0 chr5 122747646 122747767 -80337765 - MIR SINE MIR -44 218 89 200 147 0 0 chr5 122748753 122748787 -80336745 + L2 LINE L2 3276 3309 -4 182 315 120 11 chr5 122749139 122749231 -80336301 + MIR3 SINE MIR 74 175 -33 2268 58 20 0 chr5 122749394 122749686 -80335846 + L1PA7 LINE L1 5851 6148 -6 216 394 24 36 chr5 122750556 122750721 -80334811 + L2 LINE L2 3107 3269 -3 1385 268 43 47 chr5 122751257 122751809 -80333723 - L1M3f LINE L1 -4240 1088 539 27 73 0 0 chr5 122752766 122752821 -80332711 + AT_rich Low_complexity Low_complexity 1 55 0 312 311 142 16 chr5 122753183 122753549 -80331983 + L1M4 LINE L1 3590 4001 -2145 251 371 79 24 chr5 122754006 122754438 -80331094 - L2 LINE L2 -1551 1763 1303 3052 80 2 2 chr5 122754438 122754849 -80330683 + L1PA7 LINE L1 5742 6152 -2 251 371 79 24 chr5 122754849 122754874 -80330658 - L2 LINE L2 -2011 1303 1281 213 333 0 0 chr5 122754964 122755030 -80330502 + CT-rich Low_complexity Low_complexity 1 66 0 248 318 48 16 chr5 122756211 122756337 -80329195 - L2 LINE L2 -2577 737 608 2065 139 0 3 chr5 122757606 122757900 -80327632 + AluSx SINE Alu 3 295 -17 23 0 0 0 chr5 122758013 122758036 -80327496 + AT_rich Low_complexity Low_complexity 1 23 0 2175 65 55 3 chr5 122758069 122758359 -80327173 - AluY SINE Alu -6 305 1 927 252 37 4 chr5 122759637 122759883 -80325649 + MIR SINE MIR 9 262 0 278 332 142 54 chr5 122760149 122760354 -80325178 + L2 LINE L2 3045 3267 -5 1788 182 28 31 chr5 122760443 122760795 -80324737 - MLT1A1 LTR MaLR -4 361 11 3122 209 29 13 chr5 122760810 122761442 -80324090 - MLT1A1-int LTR MaLR -2 1733 1092 1601 224 23 12 chr5 122761445 122761788 -80323744 + MLT1A1 LTR MaLR 17 363 -2 2211 112 0 0 chr5 122762428 122762724 -80322808 - AluSg SINE Alu -14 296 1 437 352 123 27 chr5 122762737 122763186 -80322346 + L2 LINE L2 1876 2367 -947 3258 133 30 13 chr5 122763592 122764171 -80321361 - LTR10E LTR ERV1 0 633 1 207 318 12 0 chr5 122764388 122764473 -80321059 + T-rich Low_complexity Low_complexity 4 89 0 2409 161 5 2 chr5 122764687 122765116 -80320416 + L1MA4 LINE L1 5855 6284 -16 1693 206 43 43 chr5 122765334 122765801 -80319731 - MLT1C LTR MaLR 0 467 1 771 267 140 84 chr5 122766334 122766884 -80318648 + MLT1G LTR MaLR 10 590 0 264 318 88 6 chr5 122766901 122767071 -80318461 - L1ME LINE L1 -305 5816 5633 36 40 0 0 chr5 122767396 122767446 -80318086 + AT_rich Low_complexity Low_complexity 1 50 0 1308 216 7 102 chr5 122767634 122768037 -80317495 - MLT1A1 LTR MaLR 0 365 1 332 350 28 22 chr5 122768730 122768910 -80316622 - L1ME LINE L1 -2374 3772 3592 533 286 61 6 chr5 122769186 122769408 -80316124 + MIR SINE MIR 32 261 -1 31 44 0 0 chr5 122769605 122769650 -80315882 + AT_rich Low_complexity Low_complexity 1 45 0 2579 95 18 32 chr5 122770040 122770441 -80315091 - L1PA13 LINE L1 0 6163 5769 * 6068 90 15 0 chr5 122770438 122771740 -80313792 - L1PA11 LINE L1 0 6174 4871 39708 44 27 2 chr5 122771764 122777767 -80307765 - L1PA5 LINE L1 -2 6152 5 2579 218 55 25 chr5 122777771 122778533 -80306999 - L1 LINE L1 -1386 4996 4209 3163 50 17 2 chr5 122778533 122778937 -80306595 - L1PA3 LINE L1 -1 6154 5745 299 0 0 0 chr5 122778937 122778973 -80306559 + L1P1 LINE L1 5646 5681 -474 5436 216 40 20 chr5 122780741 122782350 -80303182 - L1 LINE L1 -2212 4170 2531 270 136 0 0 chr5 122782353 122782397 -80303135 + (TA)n Simple_repeat Simple_repeat 1 44 0 1409 259 87 34 chr5 122782425 122783481 -80302051 - L1 LINE L1 -3857 2525 1365 23 68 0 0 chr5 122784127 122784171 -80301361 + AT_rich Low_complexity Low_complexity 1 44 0 408 317 102 32 chr5 122784283 122784567 -80300965 - L2 LINE L2 0 3313 3010 1598 139 4 7 chr5 122784728 122785001 -80300531 - L1MA8 LINE L1 -423 5868 5597 437 167 10 0 chr5 122785005 122785101 -80300431 + L1MA8 LINE L1 6195 6291 0 264 353 12 12 chr5 122785569 122785742 -80299790 + CT-rich Low_complexity Low_complexity 1 173 0 2077 128 50 39 chr5 122785992 122786352 -80299180 + THE1B LTR MaLR 1 364 0 11406 101 7 2 chr5 122786352 122787924 -80297608 + THE1B-int LTR MaLR 1 1580 0 2024 116 48 67 chr5 122787924 122788295 -80297237 + THE1B LTR MaLR 1 364 0 904 305 122 28 chr5 122789246 122789957 -80295575 - L2 LINE L2 -1145 2169 1392 188 246 18 35 chr5 122789998 122790055 -80295477 - L3 LINE CR1 -861 716 661 * 268 233 47 35 chr5 122790041 122790127 -80295405 - L2 LINE L2 0 3272 3186 4101 120 27 3 chr5 122790466 122791160 -80294372 - L1PB4 LINE L1 -190 5966 5256 23 54 0 0 chr5 122791554 122791591 -80293941 + AT_rich Low_complexity Low_complexity 1 37 0 243 0 0 0 chr5 122791931 122791958 -80293574 + (T)n Simple_repeat Simple_repeat 1 27 0 28 0 0 0 chr5 122794129 122794157 -80291375 + AT_rich Low_complexity Low_complexity 1 28 0 461 275 77 16 chr5 122795902 122796245 -80289287 - MLT1J LTR MaLR -94 417 11 327 291 51 8 chr5 122796476 122796593 -80288939 + L3 LINE CR1 962 1083 -494 475 296 154 39 chr5 122798254 122798592 -80286940 + LTR33 LTR ERVL 21 397 -124 291 291 211 16 chr5 122799283 122799493 -80286039 + MIR SINE MIR 15 261 -1 22 0 0 0 chr5 122800021 122800043 -80285489 + AT_rich Low_complexity Low_complexity 1 22 0 242 241 13 25 chr5 122800499 122800578 -80284954 - MLT1K LTR MaLR -1 587 510 180 0 0 0 chr5 122800700 122800720 -80284812 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr5 122801192 122801214 -80284318 + AT_rich Low_complexity Low_complexity 1 22 0 190 353 25 33 chr5 122801438 122801560 -80283972 + MIR SINE MIR 19 139 -69 2118 160 16 16 chr5 122802156 122802531 -80283001 + THE1C LTR MaLR 1 375 0 1536 66 5 0 chr5 122802990 122803188 -80282344 - L1PA7 LINE L1 -7 6147 5949 1294 284 43 16 chr5 122803434 122803944 -80281588 + L2 LINE L2 2782 3311 -2 906 303 77 13 chr5 122804321 122804711 -80280821 + LTR33 LTR ERVL 45 459 -62 2343 104 3 0 chr5 122804724 122805023 -80280509 + AluSp SINE Alu 1 300 -13 6747 152 188 25 chr5 122805686 122807195 -80278337 - MER52A LTR ERV1 0 1755 1 1326 301 99 18 chr5 122807500 122808301 -80277231 - L2 LINE L2 -77 3236 2371 2085 219 114 20 chr5 122808302 122808855 -80276677 - MER77 LTR ERV1 0 605 1 508 300 227 12 chr5 122808856 122809186 -80276346 - L2 LINE L2 -942 2372 1972 2132 108 4 0 chr5 122809187 122809465 -80276067 - AluY SINE Alu -32 279 1 224 370 7 45 chr5 122809472 122809626 -80275906 - L2 LINE L2 -1614 1700 1553 2501 64 0 0 chr5 122809959 122810256 -80275276 - AluY SINE Alu -14 297 1 610 263 62 24 chr5 122811402 122811611 -80273921 + MIR SINE MIR 40 256 -6 192 349 108 0 chr5 122812086 122812169 -80273363 + MIR3 SINE MIR 67 158 -50 220 376 24 0 chr5 122812190 122812275 -80273257 - MIR SINE MIR -85 123 37 875 133 51 0 chr5 122812333 122812491 -80273041 - MER50 LTR ERV1 -23 711 546 3223 146 21 16 chr5 122817239 122817814 -80267718 - MER50 LTR ERV1 -156 578 1 1213 124 12 0 chr5 122820272 122820441 -80265091 + AluSg/x SINE Alu 128 298 -12 25 0 0 0 chr5 122822404 122822429 -80263103 + AT_rich Low_complexity Low_complexity 1 25 0 2606 223 119 16 chr5 122822691 122823391 -80262141 + L1PA11 LINE L1 7 778 -6803 * 41127 49 3 1 chr5 122823388 122829521 -80256011 - L1PA4 LINE L1 0 6155 6 15815 166 73 86 chr5 122829525 122834002 -80251530 + L1PA11 LINE L1 766 5896 -1716 2505 91 0 0 chr5 122834002 122834311 -80251221 + AluSx SINE Alu 3 311 -1 15815 166 73 86 chr5 122834311 122836006 -80249526 + L1PA11 LINE L1 5896 7612 0 910 159 60 9 chr5 122836010 122836243 -80249289 + Charlie1 DNA MER1_type 2420 2664 -97 1873 163 41 20 chr5 122836249 122836642 -80248890 + MER95 LTR ERV 7 407 -24 21 36 0 0 chr5 122838128 122838156 -80247376 + AT_rich Low_complexity Low_complexity 1 28 0 646 327 50 23 chr5 122838484 122838784 -80246748 + L3 LINE CR1 517 824 -753 447 333 97 52 chr5 122839384 122839829 -80245703 - L2 LINE L2 0 3272 2808 3875 208 130 106 chr5 122840398 122841647 -80243885 + L1MD3 LINE L1 6020 7467 -528 597 197 16 0 chr5 122841647 122841769 -80243763 + MLT1F1 LTR MaLR 8 131 -436 3875 208 130 106 chr5 122841769 122842311 -80243221 + L1MD3 LINE L1 7467 7995 0 3083 153 40 5 chr5 122844518 122845094 -80240438 + L1MC3 LINE L1 7169 7764 -21 247 327 75 65 chr5 122845893 122846171 -80239361 + L2 LINE L2 3030 3310 -3 214 277 0 0 chr5 122846433 122846480 -80239052 + L2 LINE L2 3217 3263 -9 383 0 21 0 chr5 122847142 122847189 -80238343 + (CA)n Simple_repeat Simple_repeat 1 48 0 237 282 26 13 chr5 122847803 122847881 -80237651 - MLT1L LTR MaLR -536 79 1 508 285 67 31 chr5 122848360 122848553 -80236979 - MIR SINE MIR 0 262 63 1986 146 104 3 chr5 122848847 122849203 -80236329 + L1PA15 LINE L1 5774 6165 0 1695 184 0 31 chr5 122849271 122849592 -80235940 + AluJb SINE Alu 1 311 -1 14554 141 31 25 chr5 122849733 122850354 -80235178 + Tigger2 DNA MER2_type 104 720 -1998 2360 166 34 2 chr5 122850354 122850765 -80234767 + MSTB LTR MaLR 1 424 -2 14554 141 31 25 chr5 122850765 122852740 -80232792 + Tigger2 DNA MER2_type 720 2715 -3 215 31 31 0 chr5 122853493 122853525 -80232007 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 281 262 183 0 chr5 122853543 122853669 -80231863 + L1MD2 LINE L1 6194 6342 -17 813 196 12 12 chr5 122854568 122854731 -80230801 + FRAM SINE Alu 2 164 -12 11860 58 4 3 chr5 122855242 122855259 -80230273 + L1P LINE L1 2432 2447 -3699 10206 61 1 1 chr5 122855259 122857347 -80228185 - L1PA5 LINE L1 0 6154 4065 11860 58 4 3 chr5 122857347 122858963 -80226569 + L1PA5 LINE L1 2447 4067 -2079 266 292 212 9 chr5 122859146 122859259 -80226273 - MIR SINE MIR -97 165 30 1003 222 78 129 chr5 122860377 122860864 -80224668 + LTR40b LTR ERVL 1 462 0 242 311 87 10 chr5 122860936 122861039 -80224493 - L2 LINE L2 -216 3056 2946 310 315 68 43 chr5 122861181 122861343 -80224189 - MIR SINE MIR -48 214 49 2339 153 7 7 chr5 122862877 122863302 -80222230 - L1M2 LINE L1 -577 5735 5311 730 241 64 35 chr5 122863644 122863847 -80221685 - MER58A DNA MER1_type 0 224 16 579 274 150 76 chr5 122863979 122864333 -80221199 - L2 LINE L2 -4 3309 2930 21 0 0 0 chr5 122864373 122864394 -80221138 + AT_rich Low_complexity Low_complexity 1 21 0 234 239 0 0 chr5 122864402 122864469 -80221063 - L1ME2 LINE L1 -2 6162 6096 185 0 40 0 chr5 122864754 122864779 -80220753 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1667 149 28 28 chr5 122864782 122865064 -80220468 - AluJo SINE Alu -30 282 1 368 224 102 7 chr5 122865122 122865269 -80220263 + MER33 DNA MER1_type 6 166 -158 2503 57 0 0 chr5 122865294 122865593 -80219939 - AluY SINE Alu -12 299 1 405 307 43 18 chr5 122865904 122866067 -80219465 - MIR SINE MIR 0 262 96 540 241 62 44 chr5 122866950 122867365 -80218167 + L1MEd LINE L1 1103 1558 -4838 25 31 0 0 chr5 122867527 122867559 -80217973 + AT_rich Low_complexity Low_complexity 1 32 0 656 271 128 43 chr5 122867792 122868303 -80217229 + L1MEd LINE L1 1998 2501 -3714 2155 150 21 0 chr5 122868318 122868704 -80216828 - MER57A LTR ERV1 -9 394 1 1651 104 16 8 chr5 122868704 122868953 -80216579 - MER57A-int LTR ERV1 0 7537 7287 4221 99 155 113 chr5 122868953 122870463 -80215069 + pTR5 LTR ERV1 743 2438 0 731 100 23 31 chr5 122870478 122870608 -80214924 - LTR54B LTR ERV1 -367 131 3 18400 104 10 24 chr5 122870620 122876445 -80209087 + L1PA7 LINE L1 443 6142 -12 28843 103 23 12 chr5 122876452 122877834 -80207698 - MER57A-int LTR ERV1 -393 7144 5779 2788 19 0 0 chr5 122877834 122878144 -80207388 + AluYa5 SINE Alu 1 310 -1 28843 103 23 12 chr5 122878144 122881060 -80204472 - MER57A-int LTR ERV1 -1758 5779 2797 8089 143 24 17 chr5 122881051 122882400 -80203132 - MER57A-int LTR ERV1 -5521 2016 659 * 393 123 77 0 chr5 122882423 122882488 -80203044 - AluS SINE Alu -3 299 230 3736 128 46 75 chr5 122882488 122882981 -80202551 - MER57A-int LTR ERV1 -6864 673 204 1783 146 3 41 chr5 122882981 122883275 -80202257 + AluSq SINE Alu 11 293 -20 3736 128 46 75 chr5 122883275 122883474 -80202058 - MER57A-int LTR ERV1 -7333 204 1 2192 165 23 0 chr5 122883474 122883868 -80201664 - MER57A LTR ERV1 0 403 1 327 289 146 33 chr5 122883868 122884204 -80201328 + L1MEd LINE L1 2524 2897 -3318 1818 174 7 0 chr5 122884205 122884498 -80201034 + AluSx SINE Alu 3 297 -15 6759 151 13 13 chr5 122884588 122886602 -80198930 + L1MA1 LINE L1 4290 6302 0 303 267 120 7 chr5 122886652 122886802 -80198730 + L1MEd LINE L1 3012 3178 -3037 438 310 50 30 chr5 122886803 122887003 -80198529 + L1ME LINE L1 147 350 -5855 258 252 46 46 chr5 122887033 122887184 -80198348 + L1ME LINE L1 1282 1432 -4964 769 189 55 37 chr5 122887222 122887386 -80198146 + AluSx SINE Alu 1 167 -145 2206 159 59 29 chr5 122887388 122887901 -80197631 + MLT2A2 LTR ERVL 1 554 0 551 112 180 0 chr5 122887907 122887996 -80197536 + AluSx SINE Alu 169 273 -37 673 105 0 32 chr5 122887999 122888123 -80197409 + (GGAA)n Simple_repeat Simple_repeat 3 122 0 304 198 37 56 chr5 122889160 122889322 -80196210 + (CACAA)n Simple_repeat Simple_repeat 5 163 0 228 186 62 47 chr5 122889395 122889524 -80196008 + (CACAA)n Simple_repeat Simple_repeat 5 135 0 2851 51 3 8 chr5 122891943 122892361 -80193171 + L1PA2 LINE L1 5785 6200 0 2047 107 0 49 chr5 122892376 122892703 -80192829 + AluY SINE Alu 1 311 0 1156 314 103 8 chr5 122893201 122893506 -80192026 - L1MC4a LINE L1 -1642 6166 5891 841 146 0 8 chr5 122893506 122893636 -80191896 - FLAM_A SINE Alu -3 130 2 1156 314 103 8 chr5 122893636 122894164 -80191368 - L1MC4a LINE L1 -1917 5891 5254 666 197 11 6 chr5 122894353 122894531 -80191001 + (TA)n Simple_repeat Simple_repeat 1 179 0 622 161 29 0 chr5 122894553 122894727 -80190805 + (TA)n Simple_repeat Simple_repeat 2 180 0 263 281 0 0 chr5 122894727 122894784 -80190748 - FAM SINE Alu -20 155 99 310 151 27 0 chr5 122894784 122894857 -80190675 + (TA)n Simple_repeat Simple_repeat 2 76 0 677 211 43 37 chr5 122894857 122895018 -80190514 - FAM SINE Alu -16 169 8 232 304 65 47 chr5 122895043 122895257 -80190275 - L1MC4a LINE L1 -1126 5020 4803 2170 101 21 0 chr5 122896109 122896396 -80189136 - AluSq SINE Alu -14 299 7 268 284 0 37 chr5 122896425 122896534 -80188998 - L1MC4 LINE L1 -1324 6718 6614 * 280 278 0 0 chr5 122896478 122896568 -80188964 + L1MC4 LINE L1 6614 6703 -1339 222 37 0 0 chr5 122896581 122896608 -80188924 + (TG)n Simple_repeat Simple_repeat 2 28 0 357 298 49 76 chr5 122896735 122896960 -80188572 - HAL1 LINE L1 -2288 219 1 201 213 62 0 chr5 122897047 122897127 -80188405 + (TAA)n Simple_repeat Simple_repeat 3 87 0 426 327 123 11 chr5 122898186 122898562 -80186970 - L1MC4 LINE L1 -299 5822 5504 395 0 0 0 chr5 122898582 122898631 -80186901 - L1HS LINE L1 -243 5912 5864 723 0 0 0 chr5 122898631 122898716 -80186816 + L1PA2 LINE L1 6068 6152 -3 237 228 154 20 chr5 122898729 122898878 -80186654 - L1MC4 LINE L1 -2327 5481 5313 21 0 0 0 chr5 122900174 122900195 -80185337 + AT_rich Low_complexity Low_complexity 1 21 0 408 40 0 0 chr5 122900301 122900351 -80185181 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 410 180 157 0 chr5 122900378 122900467 -80185065 - MIR SINE MIR -63 199 97 186 43 0 0 chr5 122901023 122901046 -80184486 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 215 338 0 15 chr5 122901050 122901118 -80184414 + L2 LINE L2 3199 3265 -7 227 120 60 40 chr5 122901950 122902000 -80183532 + Charlie8 DNA MER1_type 1372 1422 -995 21 0 0 0 chr5 122902267 122902288 -80183244 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 122904135 122904165 -80181367 + AT_rich Low_complexity Low_complexity 1 30 0 29 78 0 0 chr5 122904816 122904880 -80180652 + AT_rich Low_complexity Low_complexity 1 64 0 661 270 19 27 chr5 122904976 122905239 -80180293 - L1ME LINE L1 -650 5514 5254 990 296 116 42 chr5 122905291 122905927 -80179605 - L1ME LINE L1 -991 5155 4443 1581 155 53 15 chr5 122905927 122906192 -80179340 - AluJb SINE Alu -14 298 24 990 296 116 42 chr5 122906192 122906382 -80179150 - L1ME LINE L1 -1703 4443 4268 266 247 22 11 chr5 122906385 122906474 -80179058 + MIR SINE MIR 172 261 -1 * 287 258 112 11 chr5 122906460 122906549 -80178983 + L3 LINE CR1 1480 1577 0 253 298 180 19 chr5 122906803 122906964 -80178568 + MIR SINE MIR 76 262 0 291 209 29 9 chr5 122907393 122907498 -80178034 + (TTA)n Simple_repeat Simple_repeat 3 109 0 704 219 311 25 chr5 122907630 122908195 -80177337 + LTR50 LTR ERVL 9 793 -2 262 265 123 12 chr5 122909917 122910087 -80175445 - MER20B DNA MER1_type -60 723 535 644 287 51 0 chr5 122910828 122911023 -80174509 - MER20B DNA MER1_type -490 293 89 2196 143 13 49 chr5 122911069 122911516 -80174016 + L1MA10 LINE L1 5901 6331 -3 270 345 0 0 chr5 122911541 122911628 -80173904 - MER20B DNA MER1_type -696 87 1 455 329 145 10 chr5 122912800 122913207 -80172325 - L1ME LINE L1 -3575 2571 2110 227 352 87 49 chr5 122913418 122913787 -80171745 + MLT1J LTR MaLR 2 384 -127 346 347 91 19 chr5 122914322 122914753 -80170779 - HAL1b LINE L1 -849 1285 169 451 293 132 11 chr5 122915208 122915382 -80170150 - MIR SINE MIR -24 238 44 281 321 85 0 chr5 122915764 122915870 -80169662 + L2 LINE L2 3195 3309 -4 201 218 0 36 chr5 122916160 122916215 -80169317 + GA-rich Low_complexity Low_complexity 3 55 0 332 307 82 18 chr5 122916897 122917182 -80168350 - L1MC/D LINE L1 -746 6200 6195 213 65 0 0 chr5 122917182 122917213 -80168319 + (CA)n Simple_repeat Simple_repeat 2 32 0 332 307 82 18 chr5 122917213 122917432 -80168100 - L1MC/D LINE L1 -751 6195 5991 330 344 96 32 chr5 122917460 122917928 -80167604 - L1MC/D LINE L1 -978 5963 5466 333 324 118 42 chr5 122918068 122918391 -80167141 - L1MC/D LINE L1 -1926 5015 4673 624 256 72 0 chr5 122919471 122919651 -80165881 - HERV16 LTR ERVL -4245 751 559 606 275 83 54 chr5 122920117 122920556 -80164976 + MLT1G3 LTR MaLR 28 555 0 470 273 98 0 chr5 122920784 122920927 -80164605 - LTR16A LTR ERVL -83 367 211 25 65 0 0 chr5 122921325 122921371 -80164161 + AT_rich Low_complexity Low_complexity 1 46 0 1243 256 130 63 chr5 122921416 122922050 -80163482 - L1M4 LINE L1 -1800 4346 3756 2081 104 4 0 chr5 122922050 122922329 -80163203 - AluSx SINE Alu -13 299 20 1243 256 130 63 chr5 122922329 122922485 -80163047 - L1M4 LINE L1 -2390 3756 3612 240 35 0 0 chr5 122922485 122922514 -80163018 + (TC)n Simple_repeat Simple_repeat 2 30 0 1243 256 130 63 chr5 122922514 122922869 -80162663 - L1M4 LINE L1 -2534 3612 3123 475 243 36 40 chr5 122922928 122923029 -80162503 - L1MC/D LINE L1 -4926 2015 1915 198 0 0 0 chr5 122923029 122923051 -80162481 + (CA)n Simple_repeat Simple_repeat 1 22 0 475 243 36 40 chr5 122923051 122923171 -80162361 - L1MC/D LINE L1 -5026 1915 1795 * 1189 166 108 15 chr5 122923159 122923171 -80162361 + L1P LINE L1 4958 4967 -1179 2060 103 16 3 chr5 122923171 122923481 -80162051 - L1PA13 LINE L1 -1 6162 5849 1189 166 108 15 chr5 122923481 122923727 -80161805 + L1P LINE L1 4967 5240 -906 1670 260 59 22 chr5 122923800 122924648 -80160884 - L1MCc LINE L1 -4850 1572 813 2007 133 46 27 chr5 122925043 122925411 -80160121 + THE1C LTR MaLR 1 375 0 320 294 95 24 chr5 122925483 122925609 -80159923 - L1MCc LINE L1 -5880 542 408 2233 278 57 10 chr5 122925662 122926452 -80159080 - L1M4 LINE L1 -826 5320 4463 5115 107 9 1 chr5 122926452 122927188 -80158344 - L1PA16 LINE L1 -5 6161 5420 2233 278 57 10 chr5 122927188 122927490 -80158042 - L1M4 LINE L1 -1683 4463 4177 1018 229 49 0 chr5 122927546 122927813 -80157719 - L1ME1 LINE L1 0 6166 5887 4267 155 34 25 chr5 122928152 122929004 -80156528 - L1MA4 LINE L1 -5 6295 5436 5518 158 45 24 chr5 122929057 122930346 -80155186 - L1MA4 LINE L1 -754 5392 4170 363 306 94 59 chr5 122930348 122930518 -80155014 - HAL1 LINE L1 -2128 379 204 25 0 0 0 chr5 122930680 122930705 -80154827 + AT_rich Low_complexity Low_complexity 1 25 0 6464 121 38 54 chr5 122931353 122932407 -80153125 + Tigger3b DNA MER2_type 1 1035 -1993 3622 125 11 6 chr5 122932407 122932928 -80152604 + MER1A DNA MER1_type 4 527 0 6464 121 38 54 chr5 122932928 122933122 -80152410 + Tigger3b DNA MER2_type 1035 1230 -1 238 342 148 4 chr5 122933303 122933546 -80151986 + L3b LINE CR1 1112 1389 -194 244 247 34 34 chr5 122934276 122934365 -80151167 + GA-rich Low_complexity Low_complexity 1 89 0 222 37 0 0 chr5 122934575 122934602 -80150930 + (CGG)n Simple_repeat Simple_repeat 2 28 0 1228 141 9 5 chr5 122936557 122936770 -80148762 - Tigger5 DNA MER2_type 0 2323 2110 1201 209 80 7 chr5 122936772 122937059 -80148473 - Tigger5 DNA MER2_type -2015 308 1 342 0 0 0 chr5 122938648 122938686 -80146846 + (TG)n Simple_repeat Simple_repeat 2 39 0 486 232 51 34 chr5 122938686 122938863 -80146669 + MER112 DNA MER1_type 81 260 0 1534 167 17 101 chr5 122939258 122939666 -80145866 - MLT1A2 LTR MaLR 0 374 1 444 283 14 51 chr5 122940011 122940149 -80145383 + L2 LINE L2 3140 3272 0 216 200 0 0 chr5 122940916 122940961 -80144571 + T-rich Low_complexity Low_complexity 1 45 0 919 159 22 11 chr5 122941445 122941627 -80143905 - MER20 DNA MER1_type -1 218 35 903 236 50 48 chr5 122941790 122942227 -80143305 + MER113 DNA MER1_type? 42 479 -42 21 0 0 0 chr5 122942899 122942920 -80142612 + AT_rich Low_complexity Low_complexity 1 21 0 919 247 98 0 chr5 122943006 122943293 -80142239 - MER58B DNA MER1_type -22 319 5 204 167 0 42 chr5 122944096 122944144 -80141388 + T-rich Low_complexity Low_complexity 1 46 0 292 360 27 0 chr5 122946183 122946294 -80139238 + MIR SINE MIR 119 232 -30 409 284 26 32 chr5 122946538 122946693 -80138839 - MIR SINE MIR -89 173 20 492 240 16 23 chr5 122947176 122947305 -80138227 + L2 LINE L2 3180 3307 -6 899 228 93 48 chr5 122948398 122948753 -80136779 + MLT1A2 LTR MaLR 4 374 0 258 32 0 0 chr5 122948943 122948974 -80136558 + (T)n Simple_repeat Simple_repeat 1 31 0 370 339 63 8 chr5 122949687 122949814 -80135718 + MIR SINE MIR 20 153 -109 306 250 96 73 chr5 122951052 122951188 -80134344 + MIR SINE MIR 58 196 -66 23 68 0 0 chr5 122951231 122951275 -80134257 + AT_rich Low_complexity Low_complexity 1 44 0 1622 211 102 46 chr5 122951275 122951777 -80133755 - L1MD3 LINE L1 -163 7832 7303 21 71 0 0 chr5 122951807 122951849 -80133683 + AT_rich Low_complexity Low_complexity 1 42 0 517 275 123 12 chr5 122952369 122952540 -80132992 + MIR SINE MIR 66 255 -7 237 338 153 20 chr5 122952552 122952952 -80132580 + L2 LINE L2 2523 2975 -339 2245 143 81 11 chr5 122953209 122953655 -80131877 - MER31A LTR ERV1 -8 477 1 432 288 5 126 chr5 122954046 122954244 -80131288 - MIR3 SINE MIR -21 187 14 195 180 0 0 chr5 122954693 122954719 -80130813 + (TATAA)n Simple_repeat Simple_repeat 1 29 -21 2215 114 0 10 chr5 122954719 122955027 -80130505 + AluSc SINE Alu 3 307 -2 195 180 0 0 chr5 122955027 122955050 -80130482 + (TATAA)n Simple_repeat Simple_repeat 28 50 0 193 163 41 0 chr5 122957429 122957478 -80128054 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 25 0 0 0 chr5 122957526 122957551 -80127981 + AT_rich Low_complexity Low_complexity 1 25 0 312 241 42 0 chr5 122957552 122957718 -80127814 + (TA)n Simple_repeat Simple_repeat 1 173 0 38 68 0 0 chr5 122957738 122957811 -80127721 + AT_rich Low_complexity Low_complexity 1 73 0 1150 238 68 15 chr5 122957811 122958135 -80127397 - MLT2C1 LTR ERVL -56 341 1 209 213 38 12 chr5 122959674 122959754 -80125778 + (TA)n Simple_repeat Simple_repeat 1 82 0 303 313 78 12 chr5 122959756 122959922 -80125610 - L1ME4a LINE L1 -9 6112 5936 306 125 0 0 chr5 122959922 122959970 -80125562 + (TG)n Simple_repeat Simple_repeat 2 49 0 25 65 0 0 chr5 122960075 122960121 -80125411 + AT_rich Low_complexity Low_complexity 1 46 0 332 304 176 20 chr5 122960155 122960359 -80125173 - MIR SINE MIR -6 256 21 567 169 7 96 chr5 122961083 122961219 -80124313 - FLAM_C SINE Alu -19 124 1 26 30 0 0 chr5 122964171 122964204 -80121328 + AT_rich Low_complexity Low_complexity 1 33 0 1424 193 45 126 chr5 122966333 122966840 -80118692 + L1MD2 LINE L1 5776 6241 -1 6006 94 16 12 chr5 122967212 122968423 -80117109 + L1PA10 LINE L1 4940 6153 -15 437 176 40 81 chr5 122968488 122968617 -80116915 - L1MA9 LINE L1 0 6312 6188 2708 77 0 19 chr5 122968617 122968979 -80116553 - THE1A LTR MaLR 0 355 1 437 176 40 81 chr5 122968979 122968997 -80116535 - L1MA9 LINE L1 -124 6188 6171 387 0 0 0 chr5 122969003 122969046 -80116486 + (TG)n Simple_repeat Simple_repeat 1 43 0 276 337 67 48 chr5 122970358 122970818 -80114714 + L2 LINE L2 1750 2218 -1096 410 337 122 31 chr5 122972009 122972297 -80113235 + L2 LINE L2 2949 3262 -10 1866 184 114 15 chr5 122973087 122973550 -80111982 - MER67D LTR ERV1 0 514 6 248 352 126 40 chr5 122974453 122974700 -80110832 + L2 LINE L2 2538 2805 -509 408 337 25 6 chr5 122974886 122975049 -80110483 + L2 LINE L2 2835 3000 -313 503 288 78 53 chr5 122975855 122976175 -80109357 + L2 LINE L2 2986 3313 0 324 0 0 0 chr5 122977134 122977170 -80108362 + (CA)n Simple_repeat Simple_repeat 1 36 0 443 329 82 9 chr5 122977717 122977948 -80107584 + L2 LINE L2 1913 2160 -1154 898 251 16 55 chr5 122977984 122978239 -80107293 - L1MC5 LINE L1 -1072 6889 6645 2418 34 41 0 chr5 122978362 122978655 -80106877 + AluY SINE Alu 1 305 -6 193 279 63 51 chr5 122981677 122981749 -80103783 + L2 LINE L2 3193 3268 -4 2190 132 30 16 chr5 122981749 122982119 -80103413 - THE1C LTR MaLR 0 375 1 330 290 89 30 chr5 122982195 122982364 -80103168 + MIR SINE MIR 79 257 -5 312 48 0 0 chr5 122983018 122983060 -80102472 + (TG)n Simple_repeat Simple_repeat 1 42 0 247 279 0 12 chr5 122984164 122984250 -80101282 + (TA)n Simple_repeat Simple_repeat 2 86 0 468 250 0 0 chr5 122984603 122984731 -80100801 + (TA)n Simple_repeat Simple_repeat 1 128 0 1027 278 114 31 chr5 122984894 122985387 -80100145 + L2 LINE L2 2762 3311 -2 658 291 103 7 chr5 122985390 122985661 -80099871 - L1MC5 LINE L1 -2018 5790 5494 241 304 0 0 chr5 122985699 122985768 -80099764 - MLT1L LTR MaLR -543 72 4 22 0 0 0 chr5 122985807 122985829 -80099703 + AT_rich Low_complexity Low_complexity 1 22 0 1374 102 33 0 chr5 122985922 122986137 -80099395 - L1MA7 LINE L1 0 6291 6070 381 305 68 77 chr5 122986316 122986567 -80098965 - L1M4 LINE L1 -759 2246 1994 1559 140 17 14 chr5 122986567 122986860 -80098672 + L1MA4 LINE L1 6007 6300 0 381 305 68 77 chr5 122986860 122987192 -80098340 - L1M4 LINE L1 -1011 1994 1452 730 180 0 8 chr5 122987371 122987493 -80098039 + FLAM_A SINE Alu 1 121 -12 21 0 0 0 chr5 122989772 122989793 -80095739 + AT_rich Low_complexity Low_complexity 1 21 0 203 122 0 24 chr5 122990640 122990681 -80094851 + (TG)n Simple_repeat Simple_repeat 2 41 0 2548 24 7 3 chr5 122992701 122992999 -80092533 + AluY SINE Alu 1 299 -12 2174 198 19 12 chr5 122993672 122994082 -80091450 - MER47B DNA MER2_type -4 414 2 1551 247 47 39 chr5 122994174 122994709 -80090823 - HsTC2a DNA Tc2 -134 610 72 226 272 18 18 chr5 122994738 122994852 -80090680 - L1ME LINE L1 -333 5831 5718 278 336 71 29 chr5 122997092 122997232 -80088300 - MIR SINE MIR -36 226 81 283 355 0 9 chr5 122997443 122997550 -80087982 - MIR SINE MIR -137 125 20 24 32 0 0 chr5 122997624 122997655 -80087877 + AT_rich Low_complexity Low_complexity 1 31 0 1406 280 85 47 chr5 122998715 122999583 -80085949 - L1ME3A LINE L1 -7 6163 5263 2218 117 3 7 chr5 122999989 123000298 -80085234 + AluSx SINE Alu 1 308 -4 388 346 62 39 chr5 123000866 123001250 -80084282 - ERVL LTR ERVL -826 4938 4546 231 252 168 9 chr5 123002109 123002216 -80083316 + L1ME4a LINE L1 5993 6116 -5 1521 183 33 4 chr5 123002462 123002736 -80082796 - AluJo SINE Alu -30 282 1 380 158 0 24 chr5 123003294 123003376 -80082156 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 1752 148 17 35 chr5 123003565 123003855 -80081677 + AluJb SINE Alu 1 285 -27 2182 100 0 27 chr5 123004359 123004658 -80080874 - AluSg SINE Alu -19 291 1 2610 40 0 3 chr5 123004668 123004972 -80080560 - AluY SINE Alu -8 303 1 24 0 0 0 chr5 123008125 123008149 -80077383 + AT_rich Low_complexity Low_complexity 1 24 0 894 197 49 10 chr5 123008380 123008583 -80076949 - MER96B DNA MER1_type? -182 235 25 367 237 42 25 chr5 123008815 123008933 -80076599 + MER104 DNA Tc2 1 120 -60 3579 173 19 0 chr5 123009459 123010050 -80075482 + HERVL18 LTR ERVL 5446 6047 0 2129 145 62 6 chr5 123010051 123010389 -80075143 + LTR18A LTR ERVL 1 357 0 600 177 8 137 chr5 123010393 123010641 -80074891 + Charlie5 DNA MER1_type 2387 2602 -10 21 36 0 0 chr5 123011433 123011461 -80074071 + AT_rich Low_complexity Low_complexity 1 28 0 34987 37 30 2 chr5 123013163 123017482 -80068050 + L1P LINE L1 8 4450 -1696 23392 27 0 0 chr5 123017582 123021178 -80064354 + L1HS LINE L1 2559 6154 -1 246 337 117 6 chr5 123023335 123023498 -80062034 - L2 LINE L2 -480 2834 2654 689 310 87 8 chr5 123025175 123025417 -80060115 + MIR SINE MIR 2 262 0 626 212 18 65 chr5 123026013 123026183 -80059349 - MER20 DNA MER1_type -3 216 55 420 316 156 13 chr5 123026401 123026626 -80058906 + MIR SINE MIR 3 259 -3 314 241 58 73 chr5 123028396 123028533 -80056999 - MIR SINE MIR -6 256 122 21 0 0 0 chr5 123029976 123029997 -80055535 + AT_rich Low_complexity Low_complexity 1 21 0 764 194 7 7 chr5 123030613 123030752 -80054780 + MER45A DNA AcHobo 1 139 -39 282 56 0 0 chr5 123030818 123030854 -80054678 + (A)n Simple_repeat Simple_repeat 1 36 0 200 278 65 56 chr5 123030964 123031072 -80054460 + MIR SINE MIR 96 204 -58 217 175 25 0 chr5 123031863 123031903 -80053629 + CT-rich Low_complexity Low_complexity 2 42 0 206 299 66 72 chr5 123032254 123032421 -80053111 + MIR SINE MIR 47 212 -50 * 250 233 0 33 chr5 123032413 123032473 -80053059 - L2 LINE L2 -15 3257 3200 284 336 106 65 chr5 123032523 123032844 -80052688 - MER102b DNA MER1_type -6 335 2 207 351 98 33 chr5 123033061 123033337 -80052195 - L2 LINE L2 -428 2886 2593 2190 89 10 7 chr5 123033407 123033725 -80051807 - AluSp SINE Alu 0 313 1 443 268 28 45 chr5 123033732 123033911 -80051621 + MER104 DNA Tc2 1 176 -4 657 219 116 12 chr5 123034136 123034347 -80051185 - Charlie8 DNA MER1_type -2175 242 1 334 315 111 0 chr5 123034926 123035088 -80050444 + L1M4 LINE L1 34 213 -6183 1140 270 63 54 chr5 123035367 123036188 -80049344 + L1M4 LINE L1 662 1490 -4906 271 238 0 16 chr5 123036198 123036261 -80049271 + Tigger5 DNA MER2_type 2255 2316 -7 * 460 224 0 12 chr5 123036257 123036342 -80049190 - Tigger5 DNA MER2_type -2236 87 4 421 165 101 0 chr5 123036356 123036435 -80049097 + Tigger5 DNA MER2_type 2237 2323 0 748 291 41 38 chr5 123036488 123036832 -80048700 + L1M4 LINE L1 1533 1877 -4519 2539 250 135 36 chr5 123036938 123037754 -80047778 + L1M4 LINE L1 2022 2756 -3459 6591 69 14 0 chr5 123037754 123038763 -80046769 - L1PA8 LINE L1 -2 6170 5187 2539 250 135 36 chr5 123038763 123039481 -80046051 + L1M4 LINE L1 2756 3674 -2541 25 31 0 0 chr5 123039750 123039782 -80045750 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 123039855 123039883 -80045649 + AT_rich Low_complexity Low_complexity 1 28 0 9752 27 0 1 chr5 123039931 123041865 -80043667 - L1PA4 LINE L1 -3 6152 4220 4186 39 4 0 chr5 123041865 123042377 -80043155 + L1PA4 LINE L1 3706 4219 -1927 2393 225 84 108 chr5 123042390 123043393 -80042139 + L1M4 LINE L1 3703 4728 -1505 189 0 53 53 chr5 123043393 123043431 -80042101 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2393 225 84 108 chr5 123043431 123043506 -80042026 + L1M4 LINE L1 4728 4803 -1430 936 149 0 14 chr5 123043506 123043654 -80041878 - MER2 DNA MER2_type -185 160 15 2393 225 84 108 chr5 123043654 123044458 -80041074 + L1M4 LINE L1 4803 5675 -558 296 264 127 9 chr5 123044606 123044716 -80040816 - MER94 DNA DNA 0 134 12 181 313 136 34 chr5 123044739 123044886 -80040646 + L2 LINE L2 3115 3276 -37 4036 42 2 2 chr5 123044995 123045489 -80040043 - L1PA3 LINE L1 -1 6154 5661 246 237 137 42 chr5 123045771 123045943 -80039589 + L1M4 LINE L1 5760 5953 -280 2216 89 0 3 chr5 123051331 123051635 -80033897 + AluY SINE Alu 1 303 -8 1243 149 0 40 chr5 123051647 123051875 -80033657 + AluSg SINE Alu 3 221 -89 618 249 24 12 chr5 123052926 123053095 -80032437 - L1ME1 LINE L1 -3 6232 6062 1999 231 44 17 chr5 123053116 123053506 -80032026 - L1ME1 LINE L1 -309 5926 5517 2135 186 55 7 chr5 123053506 123053946 -80031586 - MER65C LTR ERV1 0 461 1 1999 231 44 17 chr5 123053946 123054079 -80031453 - L1ME1 LINE L1 -718 5517 5389 364 156 58 159 chr5 123054090 123054398 -80031134 - L1MA8 LINE L1 -24 6267 5991 2819 206 26 12 chr5 123054413 123055060 -80030472 - L1P LINE L1 -934 5212 4557 10791 163 20 10 chr5 123055060 123057062 -80028470 - L1MA8 LINE L1 -815 5331 3309 1336 238 113 15 chr5 123057064 123057544 -80027988 - L1ME1 LINE L1 -805 5410 4884 25 31 0 0 chr5 123057544 123057576 -80027956 + AT_rich Low_complexity Low_complexity 1 32 0 792 240 35 6 chr5 123057680 123057851 -80027681 - MIR SINE MIR -25 237 62 355 214 71 0 chr5 123057976 123058074 -80027458 - L1ME1 LINE L1 -1338 4877 4773 * 1436 216 67 65 chr5 123058071 123059085 -80026447 - L1ME1 LINE L1 -3451 2764 1762 31 36 0 18 chr5 123060394 123060417 -80025115 + AT_rich Low_complexity Low_complexity 1 23 -32 267 31 0 0 chr5 123060417 123060449 -80025083 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 36 0 18 chr5 123060449 123060481 -80025051 + AT_rich Low_complexity Low_complexity 23 55 0 262 157 0 146 chr5 123062304 123062393 -80023139 + MER116 DNA Mariner 1 76 -4 275 24 0 49 chr5 123062484 123062525 -80023007 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 2116 165 14 82 chr5 123062540 123062776 -80022756 - MLT1C LTR MaLR -8 459 271 3685 179 26 48 chr5 123062776 123062816 -80022716 - LTR39 LTR ERV1 0 783 744 315 0 0 0 chr5 123062816 123062851 -80022681 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3685 179 26 48 chr5 123062851 123063610 -80021922 - LTR39 LTR ERV1 -39 744 1 2116 165 14 82 chr5 123063610 123063859 -80021673 - MLT1C LTR MaLR -196 271 7 29 28 0 0 chr5 123063969 123064005 -80021527 + AT_rich Low_complexity Low_complexity 1 36 0 289 143 0 171 chr5 123064601 123064706 -80020826 + L1MC4 LINE L1 7859 7945 -97 454 268 59 7 chr5 123066052 123066205 -80019327 + MIR SINE MIR 28 188 -74 250 295 36 50 chr5 123067008 123067147 -80018385 + MIR SINE MIR 120 256 -6 2291 100 0 19 chr5 123067398 123067717 -80017815 - AluSq SINE Alu 0 313 1 1494 212 24 24 chr5 123067833 123068168 -80017364 - MLT1A1 LTR MaLR -30 335 1 184 279 0 0 chr5 123068260 123068303 -80017229 - MIR SINE MIR -3 259 217 1340 187 31 102 chr5 123068483 123068905 -80016627 - MSTD LTR MaLR -4 392 1 242 302 10 10 chr5 123068918 123069014 -80016518 + L1M2 LINE L1 5478 5573 -739 214 209 0 0 chr5 123069151 123069194 -80016338 - MIR SINE MIR -2 260 218 2115 159 35 14 chr5 123069542 123069977 -80015555 + L1MA9 LINE L1 4169 4612 -1534 2739 187 71 21 chr5 123069977 123070609 -80014923 + L1MA9 LINE L1 5648 6311 -1 704 122 114 0 chr5 123070610 123070733 -80014799 + AluSg/x SINE Alu 166 302 -7 315 0 0 0 chr5 123071500 123071535 -80013997 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 7689 22 0 0 chr5 123071535 123072859 -80012673 - L1PA3 LINE L1 -12 6143 4820 227 87 43 0 chr5 123072951 123072997 -80012535 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 22 35 0 0 chr5 123073498 123073527 -80012005 + AT_rich Low_complexity Low_complexity 1 29 0 4386 100 26 26 chr5 123074585 123075268 -80010264 - L1PA13 LINE L1 0 6163 5481 1215 149 5 5 chr5 123075274 123075495 -80010037 - L1PA13 LINE L1 -983 5163 4943 25 0 0 0 chr5 123076914 123076939 -80008593 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 123077566 123077599 -80007933 + AT_rich Low_complexity Low_complexity 1 33 0 370 283 141 38 chr5 123077774 123077958 -80007574 - MIR SINE MIR -7 255 53 190 200 14 114 chr5 123078914 123078984 -80006548 + L3b LINE CR1 1290 1352 -231 539 295 182 47 chr5 123079093 123079745 -80005787 - L2 LINE L2 0 3313 2570 201 301 80 25 chr5 123079776 123079975 -80005557 - L2 LINE L2 -1493 1821 1612 1334 305 59 30 chr5 123080955 123081512 -80004020 - L2 LINE L2 -2418 896 324 26 30 0 0 chr5 123082534 123082567 -80002965 + AT_rich Low_complexity Low_complexity 1 33 0 1148 214 173 29 chr5 123082816 123083162 -80002370 - MSTD LTR MaLR 0 396 1 1224 185 86 41 chr5 123084703 123084743 -80000789 - Charlie1 DNA MER1_type -7 2754 2717 194 0 39 0 chr5 123084743 123084769 -80000763 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1224 185 86 41 chr5 123084769 123084783 -80000749 - Charlie1 DNA MER1_type -44 2717 2705 1841 140 21 4 chr5 123084783 123085062 -80000470 - AluSx SINE Alu -28 284 1 1224 185 86 41 chr5 123085062 123085348 -80000184 - Charlie1 DNA MER1_type -56 2705 2390 1211 219 61 15 chr5 123085348 123085677 -79999855 + MER2 DNA MER2_type 1 344 0 1224 185 86 41 chr5 123085677 123085728 -79999804 - Charlie1 DNA MER1_type -371 2390 2343 22 35 0 0 chr5 123086072 123086101 -79999431 + AT_rich Low_complexity Low_complexity 1 29 0 2058 110 0 0 chr5 123086354 123086627 -79998905 + AluSc SINE Alu 25 297 -12 498 317 147 29 chr5 123088066 123088407 -79997125 + MLT1K LTR MaLR 208 588 0 21 36 0 0 chr5 123089106 123089134 -79996398 + AT_rich Low_complexity Low_complexity 1 28 0 760 348 48 16 chr5 123089723 123090157 -79995375 - MLT1K LTR MaLR 0 588 141 557 293 125 35 chr5 123091319 123091848 -79993684 - MLT1L LTR MaLR -6 609 1 24 53 0 0 chr5 123092968 123093006 -79992526 + AT_rich Low_complexity Low_complexity 1 38 0 300 176 0 0 chr5 123093562 123093613 -79991919 + L2 LINE L2 3263 3313 0 2045 180 11 3 chr5 123093703 123094065 -79991467 + MLT1A1 LTR MaLR 1 365 0 232 282 0 42 chr5 123094448 123094519 -79991013 + MIR SINE MIR 56 123 -139 216 204 0 0 chr5 123095992 123096036 -79989496 + T-rich Low_complexity Low_complexity 1 44 0 2271 102 17 23 chr5 123096050 123096403 -79989129 - L1PA13 LINE L1 -2 6161 5811 1666 160 147 25 chr5 123096892 123097400 -79988132 - MLT2A2 LTR ERVL 0 554 1 361 266 43 49 chr5 123098231 123098415 -79987117 - MIR SINE MIR -1 261 79 305 330 104 45 chr5 123098701 123098989 -79986543 - L2 LINE L2 -1517 1797 1493 843 263 39 13 chr5 123099080 123099312 -79986220 - LTR40c LTR ERVL -9 456 219 1064 76 0 0 chr5 123099328 123099459 -79986073 - AluSc SINE Alu -178 131 1 739 239 17 22 chr5 123099466 123099708 -79985824 + L1ME3A LINE L1 5766 5989 -189 200 339 0 31 chr5 123100680 123100745 -79984787 - L2 LINE L2 -93 3179 3117 2160 116 0 7 chr5 123101265 123101568 -79983964 - AluY SINE Alu -10 301 1 358 336 91 67 chr5 123104177 123104475 -79981057 + L2 LINE L2 2968 3272 0 2135 186 0 0 chr5 123104698 123105063 -79980469 - MLT1A1 LTR MaLR 0 365 1 238 281 86 22 chr5 123107492 123107631 -79977901 + HAL1b LINE L1 307 454 -894 1572 142 229 21 chr5 123107815 123108180 -79977352 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr5 123108408 123108429 -79977103 + AT_rich Low_complexity Low_complexity 1 21 0 923 240 164 56 chr5 123108453 123109081 -79976451 + L1MC5 LINE L1 6710 7405 -556 2413 82 63 11 chr5 123109192 123109558 -79975974 + L1PA13 LINE L1 5760 6144 -19 917 238 83 22 chr5 123109718 123110129 -79975403 + L1MC5 LINE L1 7473 7908 -53 1922 162 0 7 chr5 123110623 123110931 -79974601 + AluSx SINE Alu 5 310 -2 209 159 23 0 chr5 123111731 123111775 -79973757 + GA-rich Low_complexity Low_complexity 2 46 0 2399 112 0 0 chr5 123112320 123112632 -79972900 - AluSx SINE Alu 0 312 1 412 248 168 12 chr5 123112846 123113007 -79972525 + MIR SINE MIR 11 196 -66 427 231 120 0 chr5 123113157 123113274 -79972258 + L1ME3A LINE L1 6040 6170 0 378 0 0 0 chr5 123113343 123113385 -79972147 + (TG)n Simple_repeat Simple_repeat 2 43 0 1046 315 137 23 chr5 123114451 123115280 -79970252 + L2 LINE L2 2382 3313 0 1575 133 0 0 chr5 123116821 123117046 -79968486 - AluSg/x SINE Alu -2 308 84 1813 230 137 33 chr5 123117390 123118004 -79967528 - LTR50 LTR ERVL -117 678 1 267 232 21 95 chr5 123118281 123118376 -79967156 + LTR67 LTR ERVL 78 165 -392 * 334 276 145 41 chr5 123118354 123118575 -79966957 + MLT1L LTR MaLR 202 445 -170 5271 155 29 18 chr5 123119626 123120538 -79964994 - MER49 LTR ERV1 -1 922 1 213 267 67 13 chr5 123120623 123120698 -79964834 - L2 LINE L2 -4 3268 3190 2203 101 0 0 chr5 123120880 123121183 -79964349 + AluSc SINE Alu 1 303 0 270 0 0 0 chr5 123121887 123121917 -79963615 + (TC)n Simple_repeat Simple_repeat 1 30 0 2144 107 0 10 chr5 123121918 123122216 -79963316 - AluSq SINE Alu -18 295 1 2168 109 13 0 chr5 123122764 123123066 -79962466 + AluSg SINE Alu 1 306 -4 1872 124 69 0 chr5 123123537 123123811 -79961721 + AluSx SINE Alu 1 293 -19 213 39 0 0 chr5 123123811 123123837 -79961695 + (GA)n Simple_repeat Simple_repeat 1 26 0 1983 135 96 6 chr5 123123919 123124253 -79961279 - THE1B LTR MaLR 0 364 1 10235 96 43 41 chr5 123124253 123125830 -79959702 - THE1B-int LTR MaLR 0 1580 1 2219 130 49 0 chr5 123125830 123126177 -79959355 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 123126387 123126408 -79959124 + AT_rich Low_complexity Low_complexity 1 21 0 441 243 105 49 chr5 123128065 123128332 -79957200 + HAL1b LINE L1 282 563 -785 2961 172 0 4 chr5 123128346 123128834 -79956698 + MER66B LTR ERV1 1 486 0 2223 113 0 0 chr5 123128992 123129285 -79956247 + AluSg SINE Alu 3 295 -15 26 74 0 0 chr5 123129620 123129674 -79955858 + AT_rich Low_complexity Low_complexity 1 54 0 279 79 0 0 chr5 123130075 123130113 -79955419 + (CAG)n Simple_repeat Simple_repeat 1 38 0 244 284 90 8 chr5 123130200 123130334 -79955198 + L1P LINE L1 4094 4238 -1908 356 284 134 22 chr5 123130394 123130626 -79954906 + L1M4 LINE L1 4317 4574 -1572 2557 200 26 10 chr5 123130765 123131271 -79954261 + Tigger7 DNA MER2_type 8 521 -212 580 171 11 0 chr5 123131270 123131358 -79954174 + Tigger7 DNA MER2_type 2496 2584 -3 * 1334 139 10 0 chr5 123131545 123131753 -79953779 - MER2 DNA MER2_type -135 210 1 345 230 138 13 chr5 123131941 123132093 -79953439 + L1ME4a LINE L1 5936 6106 -15 237 305 260 17 chr5 123132251 123132428 -79953104 + MIR SINE MIR 40 259 -3 27 62 0 0 chr5 123132528 123132576 -79952956 + AT_rich Low_complexity Low_complexity 1 48 0 1308 219 13 36 chr5 123132760 123132921 -79952611 - AluJo SINE Alu -17 295 143 2133 104 31 0 chr5 123132921 123133209 -79952323 - AluSx SINE Alu -15 297 1 1308 219 13 36 chr5 123133209 123133349 -79952183 - AluJo SINE Alu -169 143 1 8426 63 4 13 chr5 123133756 123134139 -79951393 - MER11C LTR ERVK 0 1071 686 10926 27 4 0 chr5 123134139 123136202 -79949330 - L1PA4 LINE L1 0 6155 4084 8426 63 4 13 chr5 123136202 123136899 -79948633 - MER11C LTR ERVK -385 686 1 579 256 79 70 chr5 123137280 123137331 -79948201 - HAL1b LINE L1 -704 644 595 215 30 0 30 chr5 123137331 123137364 -79948168 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 579 256 79 70 chr5 123137364 123137434 -79948098 - HAL1b LINE L1 -753 595 527 2590 118 0 0 chr5 123137434 123137798 -79947734 + THE1B LTR MaLR 1 364 0 579 256 79 70 chr5 123137798 123137991 -79947541 - HAL1b LINE L1 -821 527 326 719 303 36 24 chr5 123139523 123139774 -79945758 - MIR SINE MIR -8 254 1 2579 58 0 10 chr5 123140128 123140440 -79945092 - AluY SINE Alu -2 309 1 2069 143 3 0 chr5 123140575 123140876 -79944656 + AluSx SINE Alu 1 302 -10 13315 172 91 6 chr5 123142138 123144623 -79940909 + L1MA1 LINE L1 17 2713 -4852 12144 144 19 23 chr5 123144616 123145178 -79940354 + L1MA1 LINE L1 4337 4900 -2821 * 1650 173 9 43 chr5 123145178 123145501 -79940031 + AluSx SINE Alu 1 312 0 12144 144 19 23 chr5 123145501 123148309 -79937223 + L1MA1 LINE L1 4900 7689 -32 305 196 0 0 chr5 123148317 123148373 -79937159 + L1MC4 LINE L1 6648 6703 -1339 183 255 21 0 chr5 123148377 123148424 -79937108 - L2 LINE L2 0 3313 3266 295 331 110 8 chr5 123148542 123148669 -79936863 - L2 LINE L2 -13 3300 3161 1182 305 51 69 chr5 123148850 123149374 -79936158 - MLT1G LTR MaLR -57 533 11 332 304 148 46 chr5 123149424 123149708 -79935824 - L2 LINE L2 -385 2929 2584 2293 88 7 0 chr5 123149708 123150002 -79935530 + AluSc SINE Alu 1 296 -13 332 304 148 46 chr5 123150002 123150151 -79935381 - L2 LINE L2 -730 2584 2452 29 0 0 0 chr5 123151059 123151088 -79934444 + AT_rich Low_complexity Low_complexity 1 29 0 693 325 157 27 chr5 123153089 123153987 -79931545 - L2 LINE L2 -6 3266 2244 29 47 0 0 chr5 123154233 123154276 -79931256 + AT_rich Low_complexity Low_complexity 1 43 0 242 300 0 0 chr5 123154429 123154489 -79931043 - L2 LINE L2 0 3313 3254 879 235 39 43 chr5 123154504 123154785 -79930747 + MER102a DNA MER1_type 25 304 -26 740 318 142 19 chr5 123154890 123155639 -79929893 - L2 LINE L2 -557 2757 1917 320 305 151 33 chr5 123156601 123156782 -79928750 - MIR SINE MIR -3 259 59 29 0 0 0 chr5 123156947 123156976 -79928556 + AT_rich Low_complexity Low_complexity 1 29 0 1034 161 24 176 chr5 123157797 123157905 -79927627 + Charlie1b DNA MER1_type 2 125 -2636 2009 120 20 10 chr5 123157905 123158204 -79927328 + AluSx SINE Alu 1 302 -10 1034 161 24 176 chr5 123158204 123158720 -79926812 + Charlie1b DNA MER1_type 125 518 -5 323 204 57 34 chr5 123158941 123159029 -79926503 - L1MC4 LINE L1 -1339 6703 6614 756 306 47 13 chr5 123159825 123160057 -79925475 + MIR SINE MIR 12 251 -11 556 301 134 34 chr5 123160465 123160991 -79924541 + L1ME3 LINE L1 5311 5888 -274 1780 168 7 3 chr5 123161090 123161387 -79924145 - AluJo SINE Alu -2 310 13 346 214 11 22 chr5 123163004 123163093 -79922439 + MER103 DNA DNA 8 95 -71 2133 113 10 7 chr5 123164197 123164506 -79921026 + AluSg SINE Alu 1 310 0 1787 143 16 51 chr5 123165708 123166022 -79919510 + AluSx SINE Alu 1 303 -9 2100 137 0 0 chr5 123166177 123166477 -79919055 + AluSq SINE Alu 1 300 -13 379 312 135 0 chr5 123166737 123166878 -79918654 - MIR3 SINE MIR -6 202 43 32 101 0 0 chr5 123166917 123167026 -79918506 + AT_rich Low_complexity Low_complexity 1 109 0 1514 123 48 4 chr5 123167032 123167259 -79918273 - AluSq SINE Alu -76 237 1 1461 203 38 21 chr5 123167293 123167584 -79917948 + AluJo SINE Alu 1 296 -16 244 315 34 14 chr5 123167734 123167880 -79917652 - L2 LINE L2 -224 3048 2900 25 65 0 0 chr5 123168284 123168330 -79917202 + AT_rich Low_complexity Low_complexity 1 46 0 271 261 87 43 chr5 123169303 123169464 -79916068 + MER88 LTR ERVL 79 246 -218 * 1132 243 88 40 chr5 123169322 123169778 -79915754 - MER74B LTR ERVL -75 547 70 186 43 0 0 chr5 123170319 123170342 -79915190 + (A)n Simple_repeat Simple_repeat 1 23 0 202 132 26 0 chr5 123171414 123171452 -79914080 + (TTG)n Simple_repeat Simple_repeat 2 40 0 666 289 36 5 chr5 123171482 123171676 -79913856 + MIR SINE MIR 63 262 0 2381 60 33 0 chr5 123171891 123172192 -79913340 + AluY SINE Alu 1 311 0 855 313 87 40 chr5 123174129 123174580 -79910952 - L2 LINE L2 -6 3307 2836 699 255 188 13 chr5 123174588 123174886 -79910646 - L2 LINE L2 -876 2438 2089 396 278 136 12 chr5 123174921 123175083 -79910449 + L3 LINE CR1 1305 1486 -91 1216 48 0 48 chr5 123175358 123175524 -79910008 - AluYa5 SINE Alu -4 307 150 1714 130 4 19 chr5 123175927 123176196 -79909336 - AluSx SINE Alu 0 312 48 24 0 0 0 chr5 123176582 123176606 -79908926 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 123177485 123177508 -79908024 + (A)n Simple_repeat Simple_repeat 1 23 0 575 288 35 104 chr5 123177737 123178160 -79907372 + L2 LINE L2 2869 3262 -10 337 70 254 0 chr5 123178945 123179016 -79906516 + L1P LINE L1 5283 5371 -780 270 208 0 28 chr5 123179019 123179091 -79906441 + L1PB1 LINE L1 129 198 -6665 * 6607 118 36 0 chr5 123179087 123180253 -79905279 + L1PB1 LINE L1 995 2386 -4477 442 223 16 33 chr5 123180647 123180768 -79904764 - L3 LINE CR1 -153 1424 1306 2571 178 16 10 chr5 123180869 123183606 -79901926 + L1PB1 LINE L1 3699 6513 -354 333 0 0 0 chr5 123183606 123183643 -79901889 + (CA)n Simple_repeat Simple_repeat 1 37 0 2571 178 16 10 chr5 123183643 123183999 -79901533 + L1PB1 LINE L1 6513 6865 -2 2169 121 0 0 chr5 123184369 123184666 -79900866 + AluSg SINE Alu 1 297 -13 1336 101 0 0 chr5 123184666 123184844 -79900688 + AluSq SINE Alu 134 311 -2 306 0 0 0 chr5 123184844 123184878 -79900654 + (TA)n Simple_repeat Simple_repeat 2 35 0 22 80 0 0 chr5 123184938 123184988 -79900544 + AT_rich Low_complexity Low_complexity 1 50 0 8029 126 24 3 chr5 123186136 123187410 -79898122 - HSMAR2 DNA Mariner -1 1301 2 2085 100 25 7 chr5 123187560 123187866 -79897666 - AluSx SINE Alu 0 311 1 1736 186 16 47 chr5 123189910 123190291 -79895241 - MLT1A2 LTR MaLR -5 369 1 2152 83 18 4 chr5 123190552 123190865 -79894667 + AluY SINE Alu 1 317 0 462 18 0 0 chr5 123191911 123191966 -79893566 + (TG)n Simple_repeat Simple_repeat 2 56 0 2038 110 7 3 chr5 123191966 123192248 -79893284 - AluSg SINE Alu -27 283 1 186 43 0 0 chr5 123193655 123193678 -79891854 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 259 205 13 13 chr5 123193737 123193815 -79891717 + (TTA)n Simple_repeat Simple_repeat 3 80 0 1898 157 10 7 chr5 123194545 123194850 -79890682 - AluJo SINE Alu -6 306 1 660 258 31 36 chr5 123195173 123195367 -79890165 - MIR3 SINE MIR -8 200 8 377 331 81 31 chr5 123195542 123195902 -79889630 + L2 LINE L2 2599 2976 -338 360 0 0 0 chr5 123195921 123195961 -79889571 + (CA)n Simple_repeat Simple_repeat 2 41 0 539 288 61 6 chr5 123196273 123196436 -79889096 + MIR SINE MIR 36 207 -55 248 322 0 5 chr5 123197243 123197335 -79888197 - MIR3 SINE MIR -21 187 96 422 306 50 33 chr5 123197349 123197529 -79888003 + MIR SINE MIR 12 194 -68 218 323 30 3 chr5 123197644 123197718 -79887814 - MIR SINE MIR -110 98 24 216 0 0 0 chr5 123198624 123198648 -79886884 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 25 83 0 0 chr5 123199021 123199081 -79886451 + AT_rich Low_complexity Low_complexity 1 60 0 25 51 0 0 chr5 123201614 123201653 -79883879 + AT_rich Low_complexity Low_complexity 1 39 0 378 0 0 0 chr5 123202172 123202214 -79883318 + (CA)n Simple_repeat Simple_repeat 2 43 0 528 220 143 5 chr5 123203166 123203375 -79882157 - MER3 DNA MER1_type 0 2612 2375 431 167 0 0 chr5 123203373 123203439 -79882093 - MER3 DNA MER1_type -109 100 35 * 2100 93 47 0 chr5 123205998 123206277 -79879255 + AluSq SINE Alu 1 292 -21 398 245 9 9 chr5 123206414 123206520 -79879012 - MER119 DNA MER1_type -15 568 463 783 190 21 0 chr5 123206883 123207025 -79878507 + MER58B DNA MER1_type 182 326 -15 499 266 85 34 chr5 123210741 123210918 -79874614 - MIR3 SINE MIR -6 202 17 1342 199 120 3 chr5 123210920 123211236 -79874296 - MLT1A1 LTR MaLR -12 353 1 26 82 0 0 chr5 123211743 123211804 -79873728 + AT_rich Low_complexity Low_complexity 1 61 0 1230 185 91 0 chr5 123213085 123213382 -79872150 + MER33 DNA MER1_type 1 324 0 551 234 0 14 chr5 123213628 123213769 -79871763 + L1MB7 LINE L1 6036 6174 -10 1755 152 13 26 chr5 123215071 123215373 -79870159 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr5 123215858 123215880 -79869652 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr5 123216874 123216911 -79868621 + AT_rich Low_complexity Low_complexity 1 37 0 2183 138 0 0 chr5 123217858 123218170 -79867362 + AluSx SINE Alu 1 312 0 2218 96 3 0 chr5 123218183 123218475 -79867057 + AluSp SINE Alu 1 293 -20 567 244 99 76 chr5 123218777 123219020 -79866512 + L1ME3 LINE L1 4782 5018 -1103 2292 94 0 0 chr5 123219020 123219318 -79866214 + AluSc SINE Alu 1 298 -11 567 244 99 76 chr5 123219318 123219705 -79865827 + L1ME3 LINE L1 5018 5431 -690 339 287 149 43 chr5 123219765 123220070 -79865462 + L1ME3 LINE L1 5537 5890 -272 184 255 20 0 chr5 123220424 123220475 -79865057 + L2 LINE L2 2446 2497 -817 264 211 179 32 chr5 123220480 123220575 -79864957 + MIR SINE MIR 154 262 0 277 350 60 17 chr5 123220761 123220878 -79864654 + L2 LINE L2 2940 3061 -211 446 278 68 5 chr5 123221182 123221387 -79864145 - L1ME4a LINE L1 -265 5856 5639 259 250 0 0 chr5 123221518 123221578 -79863954 - L1ME4a LINE L1 -501 5620 5561 2036 110 30 13 chr5 123221591 123221890 -79863642 + AluSg SINE Alu 2 305 -5 240 248 50 79 chr5 123222509 123222610 -79862922 + MIR3 SINE MIR 7 104 -104 513 256 65 18 chr5 123223169 123223337 -79862195 + MER5B DNA MER1_type 1 176 -2 284 275 176 54 chr5 123223420 123223642 -79861890 + L2 LINE L2 2219 2467 -847 206 295 16 0 chr5 123223691 123223752 -79861780 + L2 LINE L2 2877 2938 -334 418 263 76 49 chr5 123223813 123224037 -79861495 + L2 LINE L2 3074 3303 -10 182 343 0 43 chr5 123225125 123225195 -79860337 + L2 LINE L2 2764 2830 -484 214 358 115 42 chr5 123225208 123225373 -79860159 + L2 LINE L2 3045 3221 -51 187 250 0 0 chr5 123225552 123225588 -79859944 - L2 LINE L2 -15 3298 3263 305 180 45 34 chr5 123226998 123227087 -79858445 - MIR SINE MIR 0 262 173 586 243 8 9 chr5 123227223 123227363 -79858169 - MIR SINE MIR -62 146 19 267 93 0 0 chr5 123228792 123228835 -79856697 + (TG)n Simple_repeat Simple_repeat 2 44 0 29 47 0 0 chr5 123229266 123229309 -79856223 + AT_rich Low_complexity Low_complexity 1 43 0 250 348 161 0 chr5 123229479 123229634 -79855898 - MIR SINE MIR -72 190 11 320 219 175 44 chr5 123230130 123230244 -79855288 - MIR SINE MIR -13 249 121 46 0 0 0 chr5 123230641 123230687 -79854845 + AT_rich Low_complexity Low_complexity 1 46 0 219 235 0 39 chr5 123230754 123230805 -79854727 - L2 LINE L2 -5 3267 3219 454 200 60 0 chr5 123230915 123231015 -79854517 + MER5A DNA MER1_type 4 109 -80 1061 138 50 22 chr5 123231062 123231243 -79854289 + AluJb SINE Alu 1 186 -126 204 67 0 0 chr5 123231257 123231287 -79854245 + (A)n Simple_repeat Simple_repeat 1 30 0 343 174 58 0 chr5 123231379 123231448 -79854084 + L1ME3 LINE L1 6089 6161 -1 366 282 92 90 chr5 123231448 123231558 -79853974 + L1M4 LINE L1 3082 3190 -2956 573 120 43 43 chr5 123231558 123231675 -79853857 + L1PA8 LINE L1 6050 6166 -6 366 282 92 90 chr5 123231675 123232021 -79853511 + L1M4 LINE L1 3190 3539 -2607 304 290 114 8 chr5 123232189 123232320 -79853212 + L1MEc LINE L1 61 205 -6191 4195 157 85 53 chr5 123232888 123233762 -79851770 + MER21A LTR ERV1 1 902 -29 2106 131 0 3 chr5 123234004 123234316 -79851216 - AluSx SINE Alu -1 311 1 431 368 27 8 chr5 123234413 123234674 -79850858 + MLT1K LTR MaLR 4 269 -319 2151 129 0 7 chr5 123234947 123235249 -79850283 + AluSx SINE Alu 1 300 -12 212 137 20 0 chr5 123235506 123235557 -79849975 + (TA)n Simple_repeat Simple_repeat 2 53 0 462 259 137 10 chr5 123235685 123235850 -79849682 - MIR SINE MIR -62 146 1 633 321 19 5 chr5 123236314 123236526 -79849006 + MER58A DNA MER1_type 10 224 0 280 277 88 31 chr5 123237011 123237170 -79848362 + MLT1J LTR MaLR 19 186 -325 280 271 42 8 chr5 123237343 123237461 -79848071 + LTR67 LTR ERVL 436 557 0 1899 159 30 70 chr5 123238096 123238387 -79847145 - MLT1C LTR MaLR 0 467 166 198 0 0 0 chr5 123238387 123238409 -79847123 + (TG)n Simple_repeat Simple_repeat 1 22 0 1979 116 4 0 chr5 123238409 123238676 -79846856 - AluSc SINE Alu -33 276 9 1899 159 30 70 chr5 123238676 123238785 -79846747 - MLT1C LTR MaLR -299 168 82 380 213 0 0 chr5 123238786 123238861 -79846671 + AluJ/FLAM SINE Alu 2 76 -226 641 227 11 51 chr5 123239018 123239194 -79846338 + MLT1J LTR MaLR 1 169 -342 278 313 99 74 chr5 123239134 123239537 -79845995 + LTR67 LTR ERVL 114 526 -31 * 307 254 148 48 chr5 123239610 123239799 -79845733 + MER63A DNA MER1_type 3 210 0 226 204 0 0 chr5 123239802 123239846 -79845686 - MIR SINE MIR -148 114 71 945 197 54 118 chr5 123240228 123240618 -79844914 + MLT1A1 LTR MaLR 1 365 0 8993 105 24 0 chr5 123241443 123242700 -79842832 - HSMAR1 DNA Mariner 0 1287 1 235 243 36 18 chr5 123243271 123243382 -79842150 + L1ME LINE L1 5727 5839 -282 917 184 75 13 chr5 123243642 123243947 -79841585 + L1M4 LINE L1 2761 3084 -3062 4395 239 57 18 chr5 123243951 123245380 -79840152 + L1M4 LINE L1 3400 4884 -1262 2214 112 21 6 chr5 123246453 123246791 -79838741 + L1PA14 LINE L1 5812 6154 -7 2442 45 41 0 chr5 123246811 123247102 -79838430 - AluY SINE Alu -8 303 1 547 318 52 5 chr5 123247112 123247304 -79838228 + MIR SINE MIR 58 258 -4 588 29 0 0 chr5 123247608 123247678 -79837854 + (TC)n Simple_repeat Simple_repeat 2 71 0 243 0 0 0 chr5 123247677 123247704 -79837828 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 2310 107 13 0 chr5 123247705 123248013 -79837519 - AluSx SINE Alu 0 312 1 994 137 33 28 chr5 123248925 123249107 -79836425 - L1MB4 LINE L1 -8 6172 5990 334 313 40 0 chr5 123249438 123249537 -79835995 - MIR SINE MIR -79 183 81 654 191 0 0 chr5 123249611 123249721 -79835811 + FRAM SINE Alu 46 155 -21 181 400 30 0 chr5 123249739 123249839 -79835693 + MIR3 SINE MIR 55 157 -51 1538 164 82 134 chr5 123250594 123251132 -79834400 - MER67D LTR ERV1 0 514 5 544 268 83 57 chr5 123253404 123253632 -79831900 + MIR SINE MIR 29 262 0 285 353 69 18 chr5 123254013 123254288 -79831244 - L2 LINE L2 -372 2942 2654 184 258 62 55 chr5 123254406 123254534 -79830998 - L2 LINE L2 -1218 2096 1968 474 314 116 6 chr5 123255237 123255409 -79830123 + MIR SINE MIR 20 210 -52 24 32 0 0 chr5 123255716 123255747 -79829785 + AT_rich Low_complexity Low_complexity 1 31 0 224 167 0 21 chr5 123255788 123255836 -79829696 + (TA)n Simple_repeat Simple_repeat 2 48 0 4902 135 1 15 chr5 123255972 123256767 -79828765 + L1PA13 LINE L1 5380 6163 0 227 267 17 0 chr5 123256989 123257049 -79828483 - L3 LINE CR1 -162 1415 1355 196 356 0 33 chr5 123258250 123258340 -79827192 - L2 LINE L2 0 3272 3186 213 178 0 0 chr5 123259479 123259524 -79826008 + CT-rich Low_complexity Low_complexity 4 48 0 2530 65 0 0 chr5 123259845 123260155 -79825377 + AluY SINE Alu 1 310 -1 3086 234 47 21 chr5 123261056 123262117 -79823415 - L1ME1 LINE L1 -24 6142 5054 2247 93 0 13 chr5 123262564 123262864 -79822668 + AluY SINE Alu 1 296 -15 2265 112 0 0 chr5 123263478 123263774 -79821758 - AluSx SINE Alu -16 296 1 185 353 30 75 chr5 123265166 123265299 -79820233 - L2 LINE L2 -2 3270 3144 2275 97 3 0 chr5 123265327 123265627 -79819905 + AluSq SINE Alu 1 301 -12 1389 199 27 12 chr5 123265748 123266004 -79819528 + AluJo SINE Alu 1 260 -52 313 151 78 69 chr5 123267152 123267275 -79818257 + MER69 DNA AcHobo 47 2513 -13 22 0 0 0 chr5 123269420 123269442 -79816090 + AT_rich Low_complexity Low_complexity 1 22 0 235 184 20 0 chr5 123269724 123269773 -79815759 - Charlie8 DNA MER1_type -2233 184 135 2622 201 29 35 chr5 123269776 123269912 -79815620 - L1MB3 LINE L1 -60 6359 6224 1987 146 143 11 chr5 123269912 123270290 -79815242 + MSTA LTR MaLR 1 428 0 2622 201 29 35 chr5 123270290 123270650 -79814882 - L1MB3 LINE L1 -195 6224 5863 2747 69 11 0 chr5 123270650 123271013 -79814519 - L1PA8 LINE L1 -1 6171 5805 2622 201 29 35 chr5 123271013 123271568 -79813964 - L1MB3 LINE L1 -556 5863 5335 649 38 0 0 chr5 123271568 123271648 -79813884 + MADE1 DNA Mariner 1 80 0 2622 201 29 35 chr5 123271648 123271759 -79813773 - L1MB3 LINE L1 -1084 5335 5225 1466 160 55 40 chr5 123271788 123272113 -79813419 - L1MA7 LINE L1 -1 6290 5961 * 9511 206 53 15 chr5 123272105 123277064 -79808468 - L1MB3 LINE L1 -1147 5235 19 24 0 0 0 chr5 123277093 123277117 -79808415 + AT_rich Low_complexity Low_complexity 1 24 0 323 309 0 0 chr5 123280717 123280814 -79804718 - MER58A DNA MER1_type -15 209 113 691 230 151 48 chr5 123280816 123281173 -79804359 + MSTD LTR MaLR 1 394 -2 30114 34 2 1 chr5 123281260 123285879 -79799653 - L1PA4 LINE L1 -1 6154 1531 555 211 18 0 chr5 123285879 123285993 -79799539 - MER58A DNA MER1_type 0 116 1 180 375 125 18 chr5 123286040 123286264 -79799268 + L2 LINE L2 2812 3059 -213 223 228 174 11 chr5 123290193 123290285 -79795247 - L2 LINE L2 -10 3303 3197 210 323 32 0 chr5 123290436 123290498 -79795034 - L2 LINE L2 -220 3052 2989 1604 249 33 29 chr5 123290652 123291167 -79794365 - LTR40a LTR ERVL 0 519 3 34811 37 1 0 chr5 123291183 123296433 -79789099 - L1PA3 LINE L1 -4 6151 900 390 103 0 0 chr5 123296437 123296505 -79789027 - L1PA3 LINE L1 -5379 767 700 725 234 51 0 chr5 123296546 123296704 -79788828 + MER58A DNA MER1_type 1 166 0 578 246 89 57 chr5 123296750 123296913 -79788619 - MLT1J LTR MaLR -196 315 138 2662 202 31 2 chr5 123296913 123297457 -79788075 - MER68 LTR ERV1 -2 560 1 578 246 89 57 chr5 123297457 123297573 -79787959 - MLT1J LTR MaLR -373 138 27 404 200 31 3 chr5 123297607 123297770 -79787762 - MER20 DNA MER1_type -1 218 8 282 374 89 41 chr5 123297774 123298213 -79787319 - L2 LINE L2 -366 2948 2489 655 287 84 44 chr5 123300331 123300714 -79784818 - LTR33 LTR ERVL -4 517 120 459 301 69 17 chr5 123300871 123301044 -79784488 - MER5A DNA MER1_type -7 182 1 2047 188 37 69 chr5 123301484 123301951 -79783581 + MLT2B1 LTR ERVL 1 450 -70 1718 138 75 106 chr5 123301951 123302268 -79783264 - MSTA LTR MaLR 0 428 127 2396 66 7 3 chr5 123302268 123302573 -79782959 + AluY SINE Alu 1 306 -5 1718 138 75 106 chr5 123302573 123302697 -79782835 - MSTA LTR MaLR -301 127 1 2047 188 37 69 chr5 123302697 123302766 -79782766 + MLT2B1 LTR ERVL 450 520 0 212 352 109 39 chr5 123303972 123304438 -79781094 + L2 LINE L2 2258 2756 -558 384 296 19 19 chr5 123304781 123304889 -79780643 + MIR3 SINE MIR 10 117 -91 530 264 78 18 chr5 123305109 123305276 -79780256 - MER5B DNA MER1_type -1 177 1 676 165 9 0 chr5 123305284 123305393 -79780139 + MER5A DNA MER1_type 1 110 -79 238 179 24 60 chr5 123307442 123307526 -79778006 - MER88 LTR ERVL -305 159 79 414 104 0 0 chr5 123307860 123307927 -79777605 + Alu SINE Alu 244 310 -2 309 261 190 35 chr5 123308026 123308168 -79777364 - L1ME3 LINE L1 -274 5888 5725 12410 41 1 1 chr5 123308197 123309838 -79775694 - L1P LINE L1 -2613 3533 1894 722 303 36 24 chr5 123312056 123312307 -79773225 - MIR SINE MIR -8 254 1 2495 64 3 10 chr5 123312661 123312972 -79772560 - AluY SINE Alu -2 309 1 2090 143 3 0 chr5 123313107 123313408 -79772124 + AluSx SINE Alu 1 302 -10 12328 173 93 6 chr5 123314670 123317152 -79768380 + L1M1 LINE L1 17 2713 -4852 2919 180 24 12 chr5 123317147 123317707 -79767825 + L1M1 LINE L1 4339 4910 -2655 * 1693 176 9 43 chr5 123317707 123318030 -79767502 + AluJb SINE Alu 1 312 0 2919 180 24 12 chr5 123318030 123318146 -79767386 + L1M1 LINE L1 4910 5023 -2542 1799 174 46 8 chr5 123318191 123318558 -79766974 - L1M4c LINE L1 -5985 399 19 24 0 0 0 chr5 123318587 123318611 -79766921 + AT_rich Low_complexity Low_complexity 1 24 0 290 287 148 0 chr5 123321033 123321148 -79764384 + L2 LINE L2 3181 3312 -1 616 189 132 57 chr5 123321237 123321322 -79764210 + MER67C LTR ERV1 1 78 -632 692 98 24 41 chr5 123321322 123321445 -79764087 + L1PA10 LINE L1 6048 6168 0 616 189 132 57 chr5 123321445 123321587 -79763945 + MER67C LTR ERV1 78 245 -465 411 202 37 0 chr5 123321602 123321711 -79763821 - L1PA16 LINE L1 -834 5312 5200 3760 158 42 21 chr5 123321715 123322520 -79763012 + L1PA16 LINE L1 5343 6164 -2 338 219 0 14 chr5 123322528 123322601 -79762931 + MER67C LTR ERV1 233 304 -406 1361 89 37 20 chr5 123322603 123322849 -79762683 + L1P LINE L1 4136 4385 -1761 2183 205 2 39 chr5 123323182 123323742 -79761790 - L1 LINE L1 -1620 4526 3988 2842 137 239 136 chr5 123323743 123325064 -79760468 + Tigger1 DNA MER2_type 961 2418 0 240 244 73 12 chr5 123325490 123325572 -79759960 - MIR SINE MIR -1 261 175 21000 38 0 3 chr5 123327923 123330677 -79754855 - L1P LINE L1 -2185 3961 1216 6778 120 14 6 chr5 123331026 123332863 -79752669 - L1PA15 LINE L1 0 6165 4315 1409 197 80 35 chr5 123333439 123333980 -79751552 - MER67C LTR ERV1 0 514 9 2328 95 0 16 chr5 123334644 123334960 -79750572 - AluY SINE Alu 0 311 1 4051 166 48 18 chr5 123334960 123336545 -79748987 + L1PA16 LINE L1 4318 5926 -240 2317 99 0 10 chr5 123336546 123336858 -79748674 - AluSx SINE Alu -3 309 1 869 48 8 32 chr5 123336864 123336990 -79748542 - AluSq/x SINE Alu -180 133 11 27 29 0 0 chr5 123337127 123337161 -79748371 + AT_rich Low_complexity Low_complexity 1 34 0 14556 26 2 0 chr5 123337877 123339910 -79745622 - L1P1 LINE L1 -545 5610 3575 4512 209 136 81 chr5 123339940 123342423 -79743109 - Charlie2a DNA MER1_type -237 2625 7 894 205 30 10 chr5 123342636 123342867 -79742665 - L1M3 LINE L1 -419 5761 5524 2747 245 51 38 chr5 123342872 123344109 -79741423 - L1M3 LINE L1 -856 5290 4038 10137 77 4 1 chr5 123344111 123346282 -79739250 - L1PA7 LINE L1 -1 6153 3989 1190 117 0 0 chr5 123346283 123346471 -79739061 - L1PA7 LINE L1 -3940 2206 2019 3785 61 15 2 chr5 123346474 123347016 -79738516 + L1P LINE L1 3 551 -5595 2591 73 45 2 chr5 123347123 123347522 -79738010 + L1PA7 LINE L1 5726 6141 -13 1707 167 72 53 chr5 123347545 123347959 -79737573 + MER67C LTR ERV1 289 710 0 203 200 0 0 chr5 123348299 123348334 -79737198 + (TAA)n Simple_repeat Simple_repeat 3 37 0 615 259 166 5 chr5 123348343 123348548 -79736984 - MIR SINE MIR -6 256 19 982 202 29 5 chr5 123348783 123348991 -79736541 - MER52A LTR ERV1 0 1755 1543 6218 177 12 81 chr5 123348997 123350438 -79735094 + MER52A LTR ERV1 413 1755 0 315 318 96 46 chr5 123350578 123350839 -79734693 - L2 LINE L2 -1079 2235 1962 806 283 114 33 chr5 123352596 123353052 -79732480 + MLT1K LTR MaLR 88 580 -8 1552 202 65 77 chr5 123353216 123353269 -79732263 - MLT1D LTR MaLR -1 504 452 1983 131 12 12 chr5 123353269 123353605 -79731927 - L1PA15 LINE L1 0 6165 5830 1552 202 65 77 chr5 123353605 123354061 -79731471 - MLT1D LTR MaLR -53 452 1 2322 244 41 70 chr5 123354624 123355704 -79729828 + L2 LINE L2 2170 3218 -95 2356 86 0 19 chr5 123355704 123356019 -79729513 - AluY SINE Alu -2 309 1 2322 244 41 70 chr5 123356019 123356112 -79729420 + L2 LINE L2 3218 3312 -1 681 332 158 6 chr5 123358429 123358837 -79726695 - L2 LINE L2 -268 3045 2584 227 191 0 0 chr5 123359064 123359111 -79726421 - LTR30 LTR ERV1 -132 590 544 4862 118 77 32 chr5 123359114 123360229 -79725303 - pTR5 LTR ERV1 -417 2021 743 1875 256 12 11 chr5 123360229 123360803 -79724729 - L1 LINE L1 -3372 2774 2200 12101 153 27 11 chr5 123361371 123364117 -79721415 - L1PA15-16 LINE L1 -3935 2914 1 478 191 67 29 chr5 123364659 123364764 -79720768 - L2 LINE L2 0 3313 3205 209 315 134 16 chr5 123364858 123364985 -79720547 - MIR SINE MIR -107 155 14 189 0 0 0 chr5 123365618 123365639 -79719893 + (T)n Simple_repeat Simple_repeat 1 21 0 339 25 0 0 chr5 123366091 123366131 -79719401 + (CA)n Simple_repeat Simple_repeat 2 41 0 613 286 29 23 chr5 123367020 123367191 -79718341 + MIR SINE MIR 29 200 -62 1028 173 40 5 chr5 123367286 123367488 -79718044 - MER2 DNA MER2_type -136 209 1 213 306 35 12 chr5 123367647 123367732 -79717800 - L2 LINE L2 -209 3063 2977 381 297 26 13 chr5 123368026 123368181 -79717351 - LTR67 LTR ERVL 0 557 401 900 212 6 0 chr5 123368318 123368497 -79717035 + MER58A DNA MER1_type 45 224 0 323 331 154 46 chr5 123368779 123369169 -79716363 + HAL1 LINE L1 943 1374 -1133 2453 88 0 0 chr5 123369182 123369490 -79716042 - AluY SINE Alu -3 308 1 201 74 0 0 chr5 123369789 123369816 -79715716 + (A)n Simple_repeat Simple_repeat 1 27 0 23 92 0 0 chr5 123370517 123370582 -79714950 + AT_rich Low_complexity Low_complexity 1 65 0 314 283 22 72 chr5 123371387 123371525 -79714007 + MIR SINE MIR 20 150 -112 249 108 0 0 chr5 123371732 123371769 -79713763 + (T)n Simple_repeat Simple_repeat 1 37 0 988 251 36 19 chr5 123373195 123373502 -79712030 + L1ME2 LINE L1 45 356 -6040 2741 99 0 0 chr5 123373502 123373866 -79711666 + THE1B LTR MaLR 1 364 0 10110 101 44 9 chr5 123373866 123375393 -79710139 + THE1B-int LTR MaLR 1 1580 0 2399 144 0 8 chr5 123375397 123375764 -79709768 + THE1B LTR MaLR 1 364 0 3197 274 60 12 chr5 123375786 123377141 -79708391 + L1ME2 LINE L1 374 1794 -4602 1807 250 54 37 chr5 123377262 123377985 -79707547 + L1ME2 LINE L1 5497 6231 -2 553 253 105 54 chr5 123378080 123378376 -79707156 + L1MC5 LINE L1 7582 7892 -69 210 37 0 0 chr5 123378386 123378413 -79707119 + (TG)n Simple_repeat Simple_repeat 2 28 0 27 0 0 0 chr5 123378552 123378579 -79706953 + AT_rich Low_complexity Low_complexity 1 27 0 867 236 6 0 chr5 123378874 123379048 -79706484 - FAM SINE Alu 0 175 1 425 180 60 44 chr5 123379127 123379310 -79706222 - Charlie7 DNA MER1_type -6 2606 2421 244 193 18 0 chr5 123379307 123379364 -79706168 - Charlie7 DNA MER1_type -1902 710 653 * 237 335 68 62 chr5 123379689 123379997 -79705535 + L2 LINE L2 2737 3083 -189 303 85 0 0 chr5 123381514 123381561 -79703971 + (GA)n Simple_repeat Simple_repeat 2 48 0 31 0 0 0 chr5 123381671 123381702 -79703830 + AT_rich Low_complexity Low_complexity 1 31 0 357 329 60 0 chr5 123381812 123381961 -79703571 - L1ME3A LINE L1 -25 6145 5988 2371 123 0 9 chr5 123381981 123382321 -79703211 + MER1B DNA MER1_type 1 337 0 489 225 152 30 chr5 123382667 123382888 -79702644 - MIR SINE MIR -14 248 8 2785 107 8 3 chr5 123386356 123386729 -79698803 + THE1C LTR MaLR 1 375 0 10639 108 34 10 chr5 123386729 123388268 -79697264 + THE1C-int LTR MaLR 1 1575 -5 2598 120 25 3 chr5 123388273 123388640 -79696892 + THE1C LTR MaLR 1 375 0 341 308 51 16 chr5 123388693 123388816 -79696716 + MIR3 SINE MIR 44 169 -48 2363 85 0 10 chr5 123388823 123389118 -79696414 + AluSc SINE Alu 1 292 -17 527 286 76 2 chr5 123389866 123390061 -79695471 + MIR SINE MIR 16 224 -38 1259 292 84 21 chr5 123391553 123392029 -79693503 - MLT1J LTR MaLR 0 511 6 304 315 22 0 chr5 123393800 123393889 -79691643 - L2 LINE L2 0 3272 3182 279 274 137 88 chr5 123393889 123394240 -79691292 - L2 LINE L2 -65 3248 2881 1383 107 88 0 chr5 123394515 123394720 -79690812 - L1PA15 LINE L1 -3 6162 5940 703 227 141 50 chr5 123395265 123395542 -79689990 + MLT1J1 LTR MaLR 1 302 -144 452 202 145 141 chr5 123396164 123396259 -79689273 + MIR SINE MIR 4 97 -165 2254 107 13 0 chr5 123396259 123396557 -79688975 - AluSc SINE Alu -7 302 1 452 202 145 141 chr5 123396557 123396581 -79688951 + MIR SINE MIR 97 119 -143 1921 141 0 0 chr5 123396581 123396844 -79688688 - AluSq SINE Alu -50 263 1 452 202 145 141 chr5 123396844 123396971 -79688561 + MIR SINE MIR 119 252 -10 4239 186 36 19 chr5 123398340 123399113 -79686419 - MER21B LTR ERV1 -2 861 76 418 145 0 0 chr5 123399113 123399182 -79686350 + AluJ/FLAM SINE Alu 1 69 -233 805 148 0 37 chr5 123399184 123399319 -79686213 + AluSg/x SINE Alu 175 304 -8 466 205 12 0 chr5 123399324 123399407 -79686125 - MER21B LTR ERV1 -779 84 1 181 262 164 0 chr5 123399472 123399533 -79685999 - MIR SINE MIR -55 153 83 1946 168 3 72 chr5 123399669 123399888 -79685644 - MER7A DNA MER2_type -2692 346 113 2546 118 3 25 chr5 123399888 123400251 -79685281 - THE1A LTR MaLR 0 355 1 11792 95 31 1 chr5 123400251 123401785 -79683747 - THE1A-int LTR MaLR 0 1580 1 2577 116 3 25 chr5 123401785 123402148 -79683384 - THE1A LTR MaLR 0 355 1 1946 168 3 72 chr5 123402148 123402300 -79683232 - MER7A DNA MER2_type -2922 116 1 192 328 33 0 chr5 123403278 123403339 -79682193 + MIR SINE MIR 20 82 -180 31 68 0 0 chr5 123403458 123403517 -79682015 + AT_rich Low_complexity Low_complexity 1 59 0 187 333 0 15 chr5 123404214 123404280 -79681252 + MIR SINE MIR 79 143 -119 2146 125 3 7 chr5 123404675 123404979 -79680553 - AluSx SINE Alu -9 303 1 220 178 55 27 chr5 123405299 123405372 -79680160 + (TATG)n Simple_repeat Simple_repeat 3 77 0 302 232 82 41 chr5 123405382 123405576 -79679956 - L1ME4a LINE L1 -11 6110 5909 289 56 0 56 chr5 123406061 123406115 -79679417 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 351 260 79 0 chr5 123406131 123406258 -79679274 - L1ME4a LINE L1 -286 5835 5699 240 86 0 0 chr5 123406258 123406293 -79679239 + (TG)n Simple_repeat Simple_repeat 1 35 0 309 314 128 29 chr5 123406318 123406592 -79678940 - L1ME4a LINE L1 -2181 5627 5327 1995 248 95 18 chr5 123406667 123407216 -79678316 + MLT1E LTR MaLR 1 591 -2 2643 107 8 35 chr5 123407303 123407639 -79677893 - THE1B LTR MaLR 0 364 37 1994 157 0 7 chr5 123407639 123407938 -79677594 + AluSx SINE Alu 1 297 -15 2643 107 8 35 chr5 123407938 123407975 -79677557 - THE1B LTR MaLR -327 37 1 11268 112 32 6 chr5 123407975 123409514 -79676018 - THE1B-int LTR MaLR 0 1580 1 2780 110 3 6 chr5 123409514 123409877 -79675655 - THE1B LTR MaLR 0 364 3 22 35 0 0 chr5 123410032 123410061 -79675471 + AT_rich Low_complexity Low_complexity 1 29 0 311 319 0 11 chr5 123410380 123410471 -79675061 - L2 LINE L2 -2 3270 3181 1957 151 57 24 chr5 123410544 123410876 -79674656 - MER61A LTR ERV1 0 343 1 21326 82 63 36 chr5 123410876 123413995 -79671537 - MER61A-int LTR ERV1 0 5217 2014 1020 206 27 31 chr5 123414037 123414294 -79671238 - MER61A-int LTR ERV1 -4961 256 1 1666 146 120 35 chr5 123414294 123414610 -79670922 - MER61A LTR ERV1 0 343 1 309 364 86 28 chr5 123414651 123415046 -79670486 - L2 LINE L2 -234 3038 2622 1882 132 7 7 chr5 123415104 123415393 -79670139 + AluJb SINE Alu 1 289 -23 1701 200 50 36 chr5 123417462 123417666 -79667866 - MLT1A1 LTR MaLR 0 365 152 2276 92 0 3 chr5 123417666 123417958 -79667574 - AluSg SINE Alu -19 291 1 1701 200 50 36 chr5 123417958 123418113 -79667419 - MLT1A1 LTR MaLR -213 152 1 395 263 157 40 chr5 123418820 123419018 -79666514 + MIR SINE MIR 28 248 -14 198 247 195 0 chr5 123419032 123419109 -79666423 + MIR3 SINE MIR 115 206 -2 815 225 168 0 chr5 123419139 123419330 -79666202 - MER58A DNA MER1_type -1 223 1 198 0 0 0 chr5 123421250 123421272 -79664260 + (CA)n Simple_repeat Simple_repeat 1 22 0 317 248 142 18 chr5 123422625 123422738 -79662794 - L2 LINE L2 -2 3311 3185 239 73 73 0 chr5 123423000 123423055 -79662477 + T-rich Low_complexity Low_complexity 2 60 0 190 299 240 12 chr5 123423441 123423762 -79661770 - L2 LINE L2 -572 2742 2349 * 1371 284 89 21 chr5 123423742 123424257 -79661275 + L3 LINE CR1 420 969 -608 443 231 188 67 chr5 123424513 123424842 -79660690 + MLT1J1 LTR MaLR 66 434 -12 254 304 17 52 chr5 123425214 123425329 -79660203 - MIR3 SINE MIR -9 199 89 355 194 92 20 chr5 123426469 123426567 -79658965 - MIR SINE MIR 0 262 158 489 244 111 0 chr5 123427147 123427282 -79658250 - MER52A LTR ERV1 -10 1745 1596 379 240 14 103 chr5 123427283 123427429 -79658103 - MER52A LTR ERV1 -286 1469 1337 537 308 64 37 chr5 123427448 123427598 -79657934 - L1MC4a LINE L1 -748 5398 5664 264 77 0 0 chr5 123427598 123427637 -79657895 + (CA)n Simple_repeat Simple_repeat 2 40 0 537 308 64 37 chr5 123427637 123428196 -79657336 - L1MC4a LINE L1 -481 5665 5123 180 0 0 0 chr5 123430786 123430806 -79654726 + (A)n Simple_repeat Simple_repeat 1 20 0 978 196 22 13 chr5 123431092 123431316 -79654216 - AluJo SINE Alu -1 311 86 461 350 30 15 chr5 123432082 123432282 -79653250 - MIR SINE MIR -38 224 22 996 117 159 6 chr5 123432586 123432749 -79652783 + MER53 DNA DNA 2 189 0 2029 157 0 3 chr5 123432800 123433113 -79652419 - AluJo SINE Alu 0 312 1 307 267 107 16 chr5 123433363 123433534 -79651998 - MIR SINE MIR -65 143 11 1486 198 61 98 chr5 123433861 123434401 -79651131 + MLT2B1 LTR ERVL 1 520 0 313 286 0 0 chr5 123435178 123435248 -79650284 - MER2 DNA MER2_type -7 338 269 1073 162 10 0 chr5 123435278 123435475 -79650057 - MER2 DNA MER2_type -145 200 2 248 345 110 7 chr5 123435567 123435712 -79649820 - MARNA DNA Mariner -165 421 262 372 227 210 8 chr5 123436003 123436122 -79649410 - MER5A DNA MER1_type 0 189 47 406 273 224 7 chr5 123436213 123436356 -79649176 + MER5B DNA MER1_type 1 174 -4 22 0 0 0 chr5 123436520 123436542 -79648990 + AT_rich Low_complexity Low_complexity 1 22 0 279 295 123 29 chr5 123437399 123437643 -79647889 - MLT1J LTR MaLR -31 480 214 2387 97 0 0 chr5 123437718 123438016 -79647516 + AluSc SINE Alu 1 298 -11 932 196 60 30 chr5 123438033 123438298 -79647234 - ORSL DNA AcHobo 0 275 3 1432 238 40 32 chr5 123438369 123438840 -79646692 + L1ME1 LINE L1 5688 6162 -4 2331 101 0 0 chr5 123439826 123440123 -79645409 - AluSp SINE Alu -16 297 1 453 224 10 0 chr5 123441234 123441332 -79644200 + MER63 DNA MER1_type 27 751 -311 1106 103 13 0 chr5 123441368 123441523 -79644009 + AluSg/x SINE Alu 156 312 0 302 258 0 0 chr5 123441525 123441591 -79643941 + MER63 DNA MER1_type 997 1062 0 216 232 159 0 chr5 123442303 123442372 -79643160 + L2 LINE L2 3156 3235 -37 420 287 37 15 chr5 123442681 123442817 -79642715 + MIR SINE MIR 93 231 -31 215 211 0 0 chr5 123442845 123442883 -79642649 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1821 153 57 49 chr5 123444087 123444474 -79641058 - MLT1B LTR MaLR 0 390 1 419 235 24 114 chr5 123446368 123446536 -79638996 - MIR3 SINE MIR -51 157 1 229 215 32 108 chr5 123447161 123447254 -79638278 + L2 LINE L2 3187 3272 0 264 257 0 0 chr5 123447281 123447394 -79638138 + (TG)n Simple_repeat Simple_repeat 2 114 0 289 98 0 0 chr5 123447999 123448040 -79637492 - MLT1D LTR MaLR -145 360 320 343 290 31 40 chr5 123448066 123448290 -79637242 + L1MC4a LINE L1 5671 5892 -1916 23 0 0 0 chr5 123451999 123452022 -79633510 + AT_rich Low_complexity Low_complexity 1 23 0 334 340 107 57 chr5 123452038 123452476 -79633056 + L3 LINE CR1 42 501 -1076 183 324 131 28 chr5 123452516 123452661 -79632871 - MER5B DNA MER1_type -18 160 1 * 430 339 186 0 chr5 123452661 123452837 -79632695 + L3 LINE CR1 554 763 -814 265 313 98 23 chr5 123453948 123454162 -79631370 + L3 LINE CR1 860 1089 -488 363 23 0 0 chr5 123454164 123454208 -79631324 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 294 300 171 24 chr5 123454685 123454895 -79630637 + MIR SINE MIR 22 262 0 * 379 348 52 35 chr5 123454883 123455170 -79630362 + L3 LINE CR1 1280 1571 -6 3124 205 57 43 chr5 123456227 123456834 -79628698 - L1MD1 LINE L1 -316 5926 5329 2621 207 35 6 chr5 123456834 123457458 -79628074 - L1MB7 LINE L1 -19 6165 5524 3124 205 57 43 chr5 123457458 123458698 -79626834 - L1MD1 LINE L1 -913 5329 4038 30089 101 12 22 chr5 123458700 123464746 -79620786 - L1PA7 LINE L1 -1 6468 407 252 0 0 0 chr5 123464746 123464774 -79620758 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 30089 101 12 22 chr5 123464774 123465173 -79620359 - L1PA7 LINE L1 -6062 407 5 504 220 62 23 chr5 123465173 123465350 -79620182 - L1MD1 LINE L1 -2085 4061 3878 366 302 0 16 chr5 123467436 123467565 -79617967 - 7SK RNA RNA -66 127 1 2068 160 151 11 chr5 123467901 123468344 -79617188 + MLT2B1 LTR ERVL 1 505 -15 1650 164 116 38 chr5 123469061 123469458 -79616074 + MSTA LTR MaLR 1 428 0 291 278 177 67 chr5 123469651 123469950 -79615582 + L3 LINE CR1 1072 1403 -174 299 27 0 0 chr5 123469988 123470025 -79615507 - U2 snRNA snRNA -151 37 1 642 211 41 20 chr5 123470833 123471079 -79614453 - Charlie2a DNA MER1_type 0 2862 2612 4402 33 0 0 chr5 123471081 123471631 -79613901 - L1P LINE L1 -2022 4124 3575 207 0 0 0 chr5 123471671 123471694 -79613838 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4810 212 131 78 chr5 123471696 123474156 -79611376 - Charlie2a DNA MER1_type -266 2596 7 238 226 0 19 chr5 123474962 123475015 -79610517 - MIR3 SINE MIR -23 185 134 1385 188 66 6 chr5 123475243 123475587 -79609945 + MLT1F1 LTR MaLR 1 366 -176 34 24 0 0 chr5 123475590 123475631 -79609901 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 123478926 123478949 -79606583 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 123480023 123480045 -79605487 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 123480157 123480183 -79605349 + AT_rich Low_complexity Low_complexity 1 26 0 259 287 87 72 chr5 123480648 123480843 -79604689 - L2 LINE L2 0 3272 3075 26 0 0 0 chr5 123481002 123481028 -79604504 + AT_rich Low_complexity Low_complexity 1 26 0 696 277 62 56 chr5 123483605 123483944 -79601588 + L3b LINE CR1 1229 1569 -14 402 349 90 5 chr5 123484231 123484420 -79601112 - MIR SINE MIR -50 212 8 231 61 0 0 chr5 123485216 123485249 -79600283 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 261 299 128 0 chr5 123486049 123486166 -79599366 - L2 LINE L2 -3 3269 3138 2570 110 16 8 chr5 123486211 123486594 -79598938 + MLT1B LTR MaLR 1 386 -4 432 37 0 0 chr5 123489310 123489364 -79596168 + (CA)n Simple_repeat Simple_repeat 2 55 0 237 327 30 30 chr5 123492622 123492723 -79592809 + MIR SINE MIR 162 262 0 * 329 167 24 71 chr5 123492707 123492791 -79592741 - MIR SINE MIR -96 166 87 182 349 0 0 chr5 123494399 123494462 -79591070 - L2 LINE L2 0 3272 3210 211 338 28 0 chr5 123495975 123496046 -79589486 - L2 LINE L2 0 3272 3200 343 338 53 0 chr5 123497879 123498012 -79587520 + MER117 DNA MER1_type 17 156 -41 193 313 0 0 chr5 123498618 123498666 -79586866 - L2 LINE L2 -15 3298 3251 408 76 25 13 chr5 123500825 123500904 -79584628 + (TA)n Simple_repeat Simple_repeat 1 80 0 296 187 0 13 chr5 123504708 123504783 -79580749 + G-rich Low_complexity Low_complexity 4 77 0 194 104 0 83 chr5 123504886 123504934 -79580598 + (TC)n Simple_repeat Simple_repeat 1 44 0 301 252 91 95 chr5 123504972 123505214 -79580318 + L1M2 LINE L1 678 918 -5931 631 212 15 23 chr5 123506877 123507029 -79578503 - FLAM_C SINE Alu 0 151 1 830 196 26 83 chr5 123507554 123507784 -79577748 - MER20 DNA MER1_type -1 218 2 319 312 21 43 chr5 123508055 123508196 -79577336 - L2 LINE L2 -201 3071 2934 290 248 165 25 chr5 123508531 123508652 -79576880 + MIR SINE MIR 81 218 -44 392 311 29 111 chr5 123508821 123509101 -79576431 + L2 LINE L2 2925 3181 -91 258 378 35 58 chr5 123509349 123509812 -79575720 - L2 LINE L2 -527 2787 2336 1786 156 62 52 chr5 123509899 123510283 -79575249 + MLT1B LTR MaLR 1 388 -2 252 59 0 0 chr5 123511226 123511260 -79574272 + (TG)n Simple_repeat Simple_repeat 1 34 0 2339 99 51 25 chr5 123511781 123512136 -79573396 - THE1B LTR MaLR 0 364 1 246 325 53 1 chr5 123512403 123512522 -79573010 - MIR SINE MIR -63 145 58 2024 181 9 0 chr5 123512530 123512862 -79572670 - MER1B DNA MER1_type 0 337 3 733 234 101 31 chr5 123512912 123513139 -79572393 - MIR SINE MIR -12 250 8 1655 202 3 0 chr5 123515133 123515440 -79570092 - AluJo SINE Alu -4 308 1 4747 125 11 3 chr5 123515842 123516585 -79568947 - L1PA16 LINE L1 -9 6157 5409 600 247 78 71 chr5 123516683 123516991 -79568541 - L2 LINE L2 0 3313 3004 1786 168 128 8 chr5 123517024 123517400 -79568132 - MSTA LTR MaLR 0 428 8 310 261 46 98 chr5 123517416 123517569 -79567963 - L2 LINE L2 -344 2969 2825 1977 152 3 13 chr5 123518030 123518345 -79567187 - AluJb SINE Alu 0 312 1 355 301 87 33 chr5 123518717 123518900 -79566632 - MIR SINE MIR -50 212 20 333 68 0 0 chr5 123518902 123518946 -79566586 + (CA)n Simple_repeat Simple_repeat 2 45 0 2398 90 0 0 chr5 123518958 123519258 -79566274 + AluSp SINE Alu 7 306 -7 313 241 24 24 chr5 123519521 123519604 -79565928 + MIR3 SINE MIR 126 208 0 24 0 0 0 chr5 123520605 123520629 -79564903 + AT_rich Low_complexity Low_complexity 1 24 0 522 211 0 0 chr5 123521657 123521771 -79563761 + GA-rich Low_complexity Low_complexity 3 116 0 2415 241 18 18 chr5 123521786 123522412 -79563120 + MLT1E2 LTR MaLR 1 626 0 697 219 0 0 chr5 123522533 123522661 -79562871 - FLAM_A SINE Alu -5 128 1 675 308 58 25 chr5 123523218 123523846 -79561686 + L1MC/D LINE L1 5182 5823 -801 1696 201 97 55 chr5 123523849 123524435 -79561097 + L1ME3 LINE L1 5551 6161 -1 526 59 0 24 chr5 123524458 123524543 -79560989 + (GGA)n Simple_repeat Simple_repeat 3 85 0 887 201 21 5 chr5 123524601 123524790 -79560742 - MER105 DNA DNA -6 198 7 353 39 20 0 chr5 123524807 123524858 -79560674 + (TG)n Simple_repeat Simple_repeat 2 53 0 470 282 70 0 chr5 123525780 123525922 -79559610 - MIR SINE MIR -40 222 71 22 0 0 0 chr5 123527373 123527395 -79558137 + AT_rich Low_complexity Low_complexity 1 22 0 406 258 8 33 chr5 123528252 123528372 -79557160 + MLT1G LTR MaLR 1 117 -478 638 82 0 0 chr5 123528375 123528472 -79557060 - L1PA13 LINE L1 -3 6160 6064 912 127 82 0 chr5 123528503 123528661 -79556871 - L1PA13 LINE L1 -20 6143 5973 934 281 128 28 chr5 123528661 123529120 -79556412 + MLT1G LTR MaLR 78 582 -8 460 295 104 6 chr5 123529384 123529567 -79555965 + MIR SINE MIR 51 251 -11 1923 162 20 0 chr5 123530213 123530515 -79555017 - AluSx SINE Alu -4 308 1 560 250 20 78 chr5 123530977 123531221 -79554311 - L1M4 LINE L1 -2054 4092 3863 216 122 49 0 chr5 123531321 123531362 -79554170 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 366 292 62 94 chr5 123531562 123531901 -79553631 - MLT1J1 LTR MaLR -118 328 1 377 289 13 13 chr5 123532067 123532219 -79553313 + MER103 DNA DNA 6 157 -9 2145 119 0 0 chr5 123532767 123533060 -79552472 - AluY SINE Alu -18 293 1 479 315 103 6 chr5 123533482 123533647 -79551885 - L3 LINE CR1 -20 1557 1377 1345 115 25 13 chr5 123533647 123533882 -79551650 + THE1C LTR MaLR 138 375 0 391 324 46 25 chr5 123533906 123534144 -79551388 - L3 LINE CR1 -243 1334 1092 319 167 51 123 chr5 123535249 123535298 -79550234 - Charlie7 DNA MER1_type -2473 139 88 1427 201 33 7 chr5 123535298 123535602 -79549930 + AluJo SINE Alu 1 312 0 319 167 51 123 chr5 123535602 123535690 -79549842 - Charlie7 DNA MER1_type -2524 88 12 1114 199 42 37 chr5 123536177 123536593 -79548939 + MLT2D LTR ERVL 2 479 -41 287 263 12 25 chr5 123536595 123536675 -79548857 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 584 321 76 57 chr5 123537274 123537942 -79547590 + L1ME4a LINE L1 5029 5703 -418 677 207 33 0 chr5 123537944 123538065 -79547467 + AluJb SINE Alu 3 127 -185 426 326 37 5 chr5 123538095 123538260 -79547272 + L1ME4a LINE L1 5711 5884 -237 1163 175 8 75 chr5 123538260 123538512 -79547020 - MER8 DNA MER2_type -4 235 1 426 326 37 5 chr5 123538512 123538536 -79546996 + L1ME4a LINE L1 5884 5906 -215 1751 158 32 9 chr5 123538552 123538900 -79546632 - L1MA8 LINE L1 -5 6286 5931 1812 138 35 14 chr5 123538943 123539233 -79546299 - AluJo SINE Alu -12 300 5 385 248 111 0 chr5 123539362 123539479 -79546053 + MIR SINE MIR 112 241 -21 203 263 18 0 chr5 123540166 123540223 -79545309 + GA-rich Low_complexity Low_complexity 3 60 0 3187 145 16 4 chr5 123540640 123541149 -79544383 - MLT2B2 LTR ERVL 0 515 1 1293 190 63 22 chr5 123541237 123541505 -79544027 + AluJo SINE Alu 1 279 -33 4909 151 14 22 chr5 123541571 123542466 -79543066 + L1MC1 LINE L1 5433 6320 -13 300 282 0 0 chr5 123543318 123543389 -79542143 - MIR SINE MIR -85 177 107 2042 164 76 66 chr5 123543421 123543921 -79541611 - MLT1D LTR MaLR 0 505 1 441 0 0 0 chr5 123544523 123544572 -79540960 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 266 254 14 56 chr5 123544646 123544717 -79540815 - L2 LINE L2 0 3313 3246 4467 93 9 12 chr5 123545834 123546195 -79539337 - L1PB1 LINE L1 0 6151 5791 306 0 0 0 chr5 123546195 123546229 -79539303 + (TG)n Simple_repeat Simple_repeat 2 35 0 4467 93 9 12 chr5 123546229 123546510 -79539022 - L1PB1 LINE L1 -360 5791 5511 1616 178 15 0 chr5 123546511 123546854 -79538678 - L1 LINE L1 -1292 4854 4507 1996 112 3 43 chr5 123547365 123547668 -79537864 - AluSg SINE Alu -17 293 3 3452 205 111 23 chr5 123547821 123548091 -79537441 + MER45B DNA AcHobo 1 246 -1335 3212 137 115 9 chr5 123548091 123548733 -79536799 - MER67C LTR ERV1 0 710 1 3452 205 111 23 chr5 123548733 123549418 -79536114 + MER45B DNA AcHobo 246 1040 0 204 300 30 50 chr5 123549421 123549521 -79536011 + MER5B DNA MER1_type 36 133 -45 21 36 0 0 chr5 123550656 123550684 -79534848 + AT_rich Low_complexity Low_complexity 1 28 0 944 165 57 0 chr5 123656149 123656307 -79429225 + AluJb SINE Alu 133 299 -13 2027 118 45 0 chr5 123656313 123656602 -79428930 + AluSx SINE Alu 3 304 -8 202 355 0 0 chr5 123656602 123656664 -79428868 - L2 LINE L2 -83 3189 3128 182 352 33 33 chr5 123656695 123656786 -79428746 - MIR SINE MIR -150 112 22 207 174 0 65 chr5 123657463 123657509 -79428023 + polypyrimidine Low_complexity Low_complexity 3 45 0 527 269 22 0 chr5 123658029 123658163 -79427369 + MIR SINE MIR 60 196 -66 201 360 8 56 chr5 123658682 123658807 -79426725 - L3 LINE CR1 -32 1545 1427 189 263 0 0 chr5 123658936 123658974 -79426558 + MIR SINE MIR 87 124 -84 207 389 0 23 chr5 123659173 123659304 -79426228 + L3 LINE CR1 1007 1134 -443 439 358 110 4 chr5 123659356 123659602 -79425930 + L3 LINE CR1 1264 1535 -42 994 258 18 4 chr5 123659663 123659892 -79425640 + MIR SINE MIR 29 260 -2 441 292 34 64 chr5 123659939 123660206 -79425326 - L2 LINE L2 -40 3273 3015 186 103 0 0 chr5 123660443 123660472 -79425060 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 186 189 0 0 chr5 123660821 123660858 -79424674 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr5 123661179 123661211 -79424321 + GC_rich Low_complexity Low_complexity 1 32 0 835 175 0 7 chr5 123661998 123662141 -79423391 + MER5B DNA MER1_type 1 142 -36 287 235 317 29 chr5 123662154 123662397 -79423135 + L2 LINE L2 1650 1962 -1352 2082 115 0 0 chr5 123662433 123662712 -79422820 - AluSx SINE Alu -19 293 15 469 187 0 0 chr5 123662803 123662894 -79422638 + L1MC4 LINE L1 7685 7775 -267 518 188 31 0 chr5 123662921 123663017 -79422515 - MER5A DNA MER1_type -90 99 1 396 149 81 0 chr5 123663017 123663091 -79422441 + L1MC4 LINE L1 7800 7879 -163 8257 26 0 0 chr5 123663191 123664201 -79421331 + L1P LINE L1 2296 3305 -2841 376 123 0 0 chr5 123664413 123664478 -79421054 - L1MA7 LINE L1 0 6291 6227 2038 127 14 93 chr5 123664478 123664895 -79420637 + MER4B LTR ERV1 2 385 -225 375 206 102 3 chr5 123664883 123665001 -79420531 - MER4E LTR ERV1 -96 683 442 * 34 0 0 0 chr5 123665037 123665071 -79420461 + AT_rich Low_complexity Low_complexity 1 34 0 1160 96 18 6 chr5 123665085 123665252 -79420280 + MER4E LTR ERV1 611 779 0 778 140 42 0 chr5 123665255 123665398 -79420134 - L1MA6 LINE L1 -63 6237 6089 212 0 36 0 chr5 123666619 123666647 -79418885 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 609 118 11 0 chr5 123666647 123666740 -79418792 - L1PA10 LINE L1 -15 6153 6060 227 139 0 0 chr5 123666765 123666808 -79418724 + LTR66 LTR ERVL 394 436 -174 2288 134 20 3 chr5 123667779 123668137 -79417395 - THE1B LTR MaLR 0 364 1 265 316 115 7 chr5 123668141 123668208 -79417324 - MIR SINE MIR -35 227 169 1769 210 70 84 chr5 123668208 123668861 -79416671 + LTR48B LTR ERV1 1 644 0 265 316 115 7 chr5 123668861 123668932 -79416600 - MIR SINE MIR -93 169 74 495 113 0 0 chr5 123669548 123669628 -79415904 + (TG)n Simple_repeat Simple_repeat 2 81 0 386 333 126 13 chr5 123669854 123670085 -79415447 - MIR SINE MIR -3 259 3 492 198 0 0 chr5 123670716 123670797 -79414735 - Tigger5 DNA MER2_type -2 2321 2241 1222 184 105 45 chr5 123670809 123671076 -79414456 - AluJo SINE Alu -24 288 6 1144 96 0 0 chr5 123671076 123671233 -79414299 - Tigger5 DNA MER2_type -95 2228 2072 248 273 0 23 chr5 123671233 123671321 -79414211 + (TA)n Simple_repeat Simple_repeat 2 87 0 198 71 0 0 chr5 123671324 123671352 -79414180 + (CA)n Simple_repeat Simple_repeat 1 28 0 1844 143 127 16 chr5 123672675 123673060 -79412472 + MSTA LTR MaLR 1 428 0 7629 180 114 1 chr5 123673060 123674544 -79410988 + MSTA-int LTR MaLR 1 1651 0 1873 152 152 8 chr5 123674544 123674918 -79410614 + MSTA LTR MaLR 1 428 0 193 350 132 24 chr5 123674933 123675222 -79410310 - L2 LINE L2 -108 3164 2845 245 311 113 33 chr5 123675359 123675510 -79410022 + LTR67 LTR ERVL 110 272 -285 378 271 33 33 chr5 123675610 123675761 -79409771 + LTR67 LTR ERVL 400 550 -7 378 258 189 25 chr5 123677781 123678025 -79407507 - L1ME4a LINE L1 -226 5895 5612 24 91 0 0 chr5 123678512 123678578 -79406954 + AT_rich Low_complexity Low_complexity 1 66 0 210 349 15 0 chr5 123679049 123679115 -79406417 - MIR SINE MIR -114 94 28 1597 233 14 11 chr5 123679478 123679834 -79405698 + MLT2D LTR ERVL 1 357 -57 321 26 0 0 chr5 123679868 123679906 -79405626 + (TA)n Simple_repeat Simple_repeat 2 39 0 234 196 36 0 chr5 123679976 123680032 -79405500 + MLT2D LTR ERVL 334 391 -6 22 0 0 0 chr5 123680665 123680687 -79404845 + AT_rich Low_complexity Low_complexity 1 22 0 1915 142 3 26 chr5 123681659 123681962 -79403570 - AluSx SINE Alu -13 299 4 442 286 104 43 chr5 123682989 123683220 -79402312 + MIR SINE MIR 2 246 -16 22 56 0 0 chr5 123683627 123683663 -79401869 + AT_rich Low_complexity Low_complexity 1 36 0 1202 115 11 0 chr5 123683785 123683959 -79401573 + L1PA12 LINE L1 5978 6153 -15 22 0 0 0 chr5 123685085 123685107 -79400425 + AT_rich Low_complexity Low_complexity 1 22 0 195 235 0 0 chr5 123686081 123686132 -79399400 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 2019 138 17 0 chr5 123686225 123686573 -79398959 + L1MA8 LINE L1 5938 6291 0 301 304 257 25 chr5 123686599 123687079 -79398453 + L2 LINE L2 2707 3313 0 2296 101 0 0 chr5 123687347 123687643 -79397889 - AluSc SINE Alu -13 296 1 22 99 0 0 chr5 123687922 123687993 -79397539 + AT_rich Low_complexity Low_complexity 1 71 0 27 0 0 0 chr5 123688008 123688035 -79397497 + AT_rich Low_complexity Low_complexity 1 27 0 510 279 291 36 chr5 123688170 123688606 -79396926 + L2 LINE L2 2778 3313 0 282 303 11 11 chr5 123689068 123689157 -79396375 + MER5B DNA MER1_type 4 92 -86 5380 176 17 6 chr5 123689186 123690310 -79395222 + L1MA4 LINE L1 5166 6300 0 1947 205 16 33 chr5 123690321 123690413 -79395119 + L1MA7 LINE L1 5813 5905 -386 3395 180 15 86 chr5 123690413 123690896 -79394636 + MER44D DNA MER2_type 1 517 -1970 1709 194 0 3 chr5 123690896 123691195 -79394337 + AluJb SINE Alu 7 304 -8 3395 180 15 86 chr5 123691195 123691466 -79394066 + MER44D DNA MER2_type 517 571 -1916 2025 154 0 6 chr5 123691466 123691778 -79393754 + AluSg SINE Alu 1 310 0 3395 180 15 86 chr5 123691778 123691811 -79393721 + MER44D DNA MER2_type 571 605 0 1947 205 16 33 chr5 123691811 123692205 -79393327 + L1MA7 LINE L1 5905 6291 0 2212 111 39 33 chr5 123692253 123692615 -79392917 + THE1B LTR MaLR 1 364 0 465 278 92 0 chr5 123692683 123692856 -79392676 + LTR37A LTR ERV1 226 414 -12 2857 6 0 0 chr5 123692872 123693186 -79392346 - AluYb8 SINE Alu -4 314 1 22 0 0 0 chr5 123693186 123693208 -79392324 + AT_rich Low_complexity Low_complexity 1 22 0 413 333 47 12 chr5 123694083 123694254 -79391278 - MER5B DNA MER1_type 0 178 2 443 296 8 0 chr5 123694388 123694513 -79391019 - MIR SINE MIR 0 262 137 376 276 26 26 chr5 123694517 123694633 -79390899 - MIR SINE MIR 0 262 147 486 206 22 0 chr5 123694690 123694782 -79390750 - MER2 DNA MER2_type -249 96 3 540 228 0 18 chr5 123694782 123694896 -79390636 - MIR SINE MIR -119 143 32 25 0 0 0 chr5 123695528 123695553 -79389979 + AT_rich Low_complexity Low_complexity 1 25 0 2183 99 3 10 chr5 123697600 123697894 -79387638 + AluSp SINE Alu 1 292 -21 186 43 0 0 chr5 123698847 123698870 -79386662 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2337 68 10 0 chr5 123699930 123700238 -79385294 - AluY SINE Alu 0 311 1 565 306 48 15 chr5 123700459 123700665 -79384867 - MIR SINE MIR 0 262 50 28 0 0 0 chr5 123700833 123700861 -79384671 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 123701911 123701943 -79383589 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr5 123702785 123702822 -79382710 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr5 123703252 123703276 -79382256 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr5 123704271 123704292 -79381240 + AT_rich Low_complexity Low_complexity 1 21 0 282 283 115 18 chr5 123805889 123806002 -79279530 - L2 LINE L2 -578 2736 2613 393 257 62 14 chr5 123806055 123806199 -79279333 + MLT1J LTR MaLR 1 151 -360 534 292 27 16 chr5 123806225 123806410 -79279122 + MLT1J LTR MaLR 220 406 -105 199 326 115 43 chr5 123806692 123806996 -79278536 + L2 LINE L2 2159 2484 -830 251 385 21 0 chr5 123807283 123807426 -79278106 + MIR SINE MIR 50 195 -67 358 155 0 0 chr5 123807625 123807683 -79277849 - L2 LINE L2 -5 3308 3251 636 111 0 0 chr5 123807908 123808007 -79277525 - L1M2 LINE L1 -518 5782 5684 1396 146 94 10 chr5 123808007 123808311 -79277221 + L1MA8 LINE L1 5957 6291 0 676 172 18 12 chr5 123808353 123808526 -79277006 + MSTC LTR MaLR 4 180 -185 212 311 68 0 chr5 123808987 123809061 -79276471 + MIR SINE MIR 38 116 -92 740 213 53 12 chr5 123809201 123809370 -79276162 + MIR SINE MIR 22 197 -65 479 164 14 107 chr5 123809382 123809522 -79276010 + L1ME1 LINE L1 6007 6133 -33 2303 158 24 7 chr5 123809551 123809969 -79275563 + L1MC2 LINE L1 5908 6332 -12 405 322 38 27 chr5 123810816 123810999 -79274533 + MIR3 SINE MIR 24 208 0 428 311 150 11 chr5 123811322 123811582 -79273950 - L1ME LINE L1 -299 5822 5527 399 282 154 0 chr5 123811597 123811753 -79273779 + MIR SINE MIR 7 186 -76 298 242 95 47 chr5 123812612 123812773 -79272759 - MIR3 SINE MIR -66 142 7 511 269 0 35 chr5 123814054 123814195 -79271337 + L2 LINE L2 3178 3313 0 794 221 44 6 chr5 123814470 123814651 -79270881 + MER5A DNA MER1_type 1 188 -1 677 181 15 8 chr5 123814924 123815057 -79270475 + FRAM SINE Alu 20 153 -23 215 368 42 11 chr5 123815062 123815157 -79270375 - MIR3 SINE MIR -24 184 87 203 319 0 66 chr5 123816913 123817004 -79268528 + L2 LINE L2 2605 2689 -625 316 316 68 0 chr5 123819034 123819167 -79266365 - L2 LINE L2 -1 3312 3171 1726 335 97 11 chr5 123819208 123820141 -79265391 - L2 LINE L2 -364 2950 1938 896 272 103 13 chr5 123820165 123820466 -79265066 - MLT1G1 LTR MaLR -194 401 74 316 326 25 5 chr5 123820552 123820748 -79264784 + L1MC4a LINE L1 5694 5893 -1915 424 213 98 94 chr5 123820812 123821047 -79264485 + MER106A DNA MER1_type 1 236 0 7343 30 12 0 chr5 123822475 123823554 -79261978 + L1PA4 LINE L1 5066 6155 0 1043 227 27 102 chr5 123823592 123824002 -79261530 - MLT1B LTR MaLR -11 379 1 742 209 37 0 chr5 123824221 123824412 -79261120 - L1MB4 LINE L1 -6 6174 5977 405 319 72 19 chr5 123824909 123825116 -79260416 + MER102a DNA MER1_type 105 322 -8 180 286 54 18 chr5 123825972 123826028 -79259504 + MIR SINE MIR 2 59 -203 2041 143 3 3 chr5 123826547 123826847 -79258685 + AluSx SINE Alu 1 300 -12 617 238 176 24 chr5 123827014 123827309 -79258223 + MLT1C LTR MaLR 35 390 -77 268 103 0 0 chr5 123827401 123827440 -79258092 - MLT2D LTR ERVL 0 515 477 396 0 0 0 chr5 123827441 123827485 -79258047 + (TG)n Simple_repeat Simple_repeat 2 45 0 3118 116 146 15 chr5 123827485 123828149 -79257383 - Tigger3(Golem) DNA MER2_type -1 3028 2278 602 195 42 0 chr5 123828121 123828239 -79257293 - Tigger3(Golem) DNA MER2_type -2900 129 7 * 228 35 0 0 chr5 123828242 123828271 -79257261 + (TA)n Simple_repeat Simple_repeat 2 30 0 244 145 16 16 chr5 123828417 123828479 -79257053 + (TA)n Simple_repeat Simple_repeat 2 63 0 1145 213 35 42 chr5 123828486 123828901 -79256631 - MLT2D LTR ERVL -48 416 2 338 244 55 47 chr5 123829462 123829589 -79255943 + MIR SINE MIR 135 262 0 1799 231 127 23 chr5 123829668 123830234 -79255298 - MLT1E2 LTR MaLR -1 625 1 1177 253 64 57 chr5 123832150 123832756 -79252776 - LTR19C LTR ERV1 0 779 1 946 226 78 22 chr5 123833143 123833373 -79252159 - MIR SINE MIR -13 249 7 219 288 14 41 chr5 123833791 123833864 -79251668 + MER5A DNA MER1_type 3 73 -116 1944 154 32 19 chr5 123834614 123834984 -79250548 - THE1C LTR MaLR 0 375 1 540 264 69 46 chr5 123835285 123835337 -79250195 - L2 LINE L2 -2 3311 3262 1556 188 144 31 chr5 123835337 123835720 -79249812 + MSTB LTR MaLR 1 426 0 540 264 69 46 chr5 123835720 123835883 -79249649 - L2 LINE L2 -51 3262 3091 242 349 156 0 chr5 123835913 123836022 -79249510 + L2 LINE L2 3136 3261 -11 1205 195 47 86 chr5 123836031 123836416 -79249116 - MLT1A2 LTR MaLR -4 370 1 640 207 118 24 chr5 123836476 123836645 -79248887 + MIR SINE MIR 18 202 -60 1566 172 37 79 chr5 123836704 123837111 -79248421 - MLT1B LTR MaLR 0 390 1 812 104 0 0 chr5 123837126 123837232 -79248300 - AluJb SINE Alu -6 306 201 32245 38 2 1 chr5 123837234 123843378 -79242154 + L1PA3 LINE L1 5 6152 -3 1224 217 0 0 chr5 123843405 123843617 -79241915 - AluJb SINE Alu -98 214 3 2158 124 18 47 chr5 123844635 123845021 -79240511 - THE1C LTR MaLR 0 375 1 2258 182 29 2 chr5 123845464 123845881 -79239651 - MSTA LTR MaLR 0 428 1 8487 186 18 7 chr5 123845883 123846082 -79239450 - MSTA-int LTR MaLR -2 1649 1454 1928 133 95 24 chr5 123846082 123846502 -79239030 - LTR7 LTR ERV1 0 450 1 8487 186 18 7 chr5 123846502 123847933 -79237599 - MSTA-int LTR MaLR -197 1454 1 2345 165 39 0 chr5 123847933 123848345 -79237187 - MSTA LTR MaLR 0 428 1 254 118 0 20 chr5 123850300 123850331 -79235201 + (TAA)n Simple_repeat Simple_repeat 2 33 -18 2208 104 0 3 chr5 123850331 123850628 -79234904 + AluSx SINE Alu 1 296 -16 254 118 0 20 chr5 123850628 123850647 -79234885 + (TAA)n Simple_repeat Simple_repeat 33 51 0 269 258 123 58 chr5 123851719 123851874 -79233658 - L2 LINE L2 -44 3269 3105 751 247 39 6 chr5 123852026 123852208 -79233324 - MER20 DNA MER1_type 0 219 32 1015 296 130 37 chr5 123852379 123852895 -79232637 - L2 LINE L2 -515 2799 2236 197 347 13 47 chr5 123853525 123853675 -79231857 - MIR SINE MIR -46 216 72 348 204 117 0 chr5 123854177 123854280 -79231252 - L1ME4a LINE L1 0 6121 6007 1621 269 118 14 chr5 123854418 123854994 -79230538 - L2 LINE L2 -454 2860 2225 3125 165 13 2 chr5 123855069 123855680 -79229852 + L1M2 LINE L1 2178 2795 -4054 1314 222 0 11 chr5 123855681 123855942 -79229590 + AluJo SINE Alu 55 312 0 9573 184 49 40 chr5 123855950 123858717 -79226815 + L1M2 LINE L1 2795 5717 -1131 4076 135 51 13 chr5 123858717 123859465 -79226067 + HSMAR2 DNA Mariner 511 1286 -16 2144 142 0 3 chr5 123859473 123859782 -79225750 - AluSx SINE Alu -4 308 1 1221 167 48 4 chr5 123860443 123860713 -79224819 - L1MC2 LINE L1 -9 6335 6054 1349 179 0 8 chr5 123860764 123861027 -79224505 - L1MC2 LINE L1 -296 6048 5788 282 263 0 0 chr5 123861047 123861123 -79224409 + MER34 LTR ERV1 21 96 -446 1574 195 98 19 chr5 123861127 123861585 -79223947 + LTR29 LTR ERV1 137 595 0 926 203 31 5 chr5 123861604 123861796 -79223736 - L1MC2 LINE L1 -678 5666 5470 785 174 56 5 chr5 123863084 123863297 -79222235 - L1MC2 LINE L1 -2510 5485 5262 714 207 0 7 chr5 123863331 123863466 -79222066 - AluJo SINE Alu -178 134 1 1536 245 34 10 chr5 123863466 123863989 -79221543 - L1MC2 LINE L1 -870 5276 4741 3605 136 20 1 chr5 123864680 123865603 -79219929 - L1PA16 LINE L1 -9 6157 5171 297 235 15 15 chr5 123867647 123867715 -79217817 + L2 LINE L2 3244 3311 -2 21 57 0 0 chr5 123867717 123867752 -79217780 + AT_rich Low_complexity Low_complexity 1 35 0 636 352 18 0 chr5 123868213 123868432 -79217100 - MIR SINE MIR -3 259 37 325 329 65 35 chr5 123869439 123869670 -79215862 - MIR SINE MIR -23 239 2 3967 77 13 4 chr5 123870563 123871141 -79214391 + LTR10C LTR ERV1 1 505 0 325 264 0 0 chr5 123871736 123871808 -79213724 + LTR16A1 LTR ERVL 386 457 0 426 190 89 113 chr5 123872020 123872267 -79213265 + MER112 DNA MER1_type 4 244 -16 958 223 15 5 chr5 123872965 123873171 -79212361 + MIR SINE MIR 9 216 -46 2123 161 46 145 chr5 123873187 123873575 -79211957 - MER50 LTR ERV1 -8 726 433 13096 99 11 0 chr5 123873575 123875290 -79210242 + L1PA7 LINE L1 3459 5206 -984 270 0 0 0 chr5 123875290 123875320 -79210212 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 13096 99 11 0 chr5 123875320 123876317 -79209215 + L1PA7 LINE L1 5206 6190 0 2123 161 46 145 chr5 123876317 123876617 -79208915 - MER50 LTR ERV1 -301 433 105 229 188 62 0 chr5 123876621 123876669 -79208863 - MER50 LTR ERV1 -566 168 118 990 109 0 7 chr5 123876696 123876843 -79208689 - L1PA8 LINE L1 -8 6164 6019 1276 237 91 58 chr5 123876849 123877526 -79208006 - MER61E LTR ERV1 -7 772 28 715 212 13 7 chr5 123877569 123877720 -79207812 - HUERS-P3 LTR ERV1 -1 8918 8767 536 278 12 13 chr5 123877820 123878091 -79207441 - HERV9 LTR ERV1 -334 7978 5902 2646 89 3 11 chr5 123878105 123878463 -79207069 + THE1A LTR MaLR 1 355 0 27644 174 11 18 chr5 123878463 123883515 -79202017 - HERV9 LTR ERV1 -2773 6146 1131 611 157 0 0 chr5 123883515 123883623 -79201909 - MER50 LTR ERV1 -626 108 1 1314 190 77 85 chr5 123883864 123884333 -79201199 + MER4C LTR ERV1 1 465 0 622 172 57 13 chr5 123884539 123884696 -79200836 - Charlie2a DNA MER1_type 0 2862 2699 518 213 33 11 chr5 123884687 123884870 -79200662 - Charlie2a DNA MER1_type -1203 1659 1473 * 336 239 9 28 chr5 123884934 123885043 -79200489 - Charlie2b DNA MER1_type -2110 672 566 535 280 138 13 chr5 123885086 123885318 -79200214 - Charlie2b DNA MER1_type -2513 269 9 694 291 62 27 chr5 123887148 123887516 -79198016 + MLT1L LTR MaLR 146 526 -89 2367 201 72 28 chr5 123887537 123888080 -79197452 + MLT1F1 LTR MaLR 1 567 0 222 118 0 0 chr5 123888513 123888547 -79196985 + (A)n Simple_repeat Simple_repeat 1 34 0 3123 148 25 66 chr5 123890282 123890919 -79194613 - LTR36 LTR ERV1 0 611 1 1981 209 40 24 chr5 123892222 123892552 -79192980 - MLT1C LTR MaLR 0 467 127 1856 160 40 37 chr5 123892552 123892926 -79192606 + THE1C LTR MaLR 1 375 0 1981 209 40 24 chr5 123892926 123893049 -79192483 - MLT1C LTR MaLR -340 127 7 577 300 49 57 chr5 123894908 123895171 -79190361 + MIR SINE MIR 2 262 0 2972 218 48 11 chr5 123895840 123896465 -79189067 - MER82 DNA MER2_type -5 648 1 677 227 33 7 chr5 123897176 123897326 -79188206 - MER77 LTR ERV1 -4 601 448 1716 153 103 17 chr5 123897697 123898056 -79187476 - MLT1B LTR MaLR 0 390 1 26 30 0 0 chr5 123898620 123898653 -79186879 + AT_rich Low_complexity Low_complexity 1 33 0 761 293 56 0 chr5 123899162 123899394 -79186138 + MIR SINE MIR 13 257 -5 188 231 26 0 chr5 123899610 123899649 -79185883 - MIR SINE MIR 0 262 223 375 349 62 20 chr5 123899730 123900022 -79185510 + L2 LINE L2 2090 2393 -921 314 254 0 103 chr5 123900049 123900175 -79185357 - L2 LINE L2 -47 3266 3154 1711 200 3 0 chr5 123900712 123901007 -79184525 - AluJo SINE Alu -16 296 1 1507 17 0 0 chr5 123901686 123901860 -79183672 - L1PA4 LINE L1 -4 6151 5978 214 215 28 19 chr5 123901880 123901987 -79183545 + GA-rich Low_complexity Low_complexity 4 111 0 661 315 110 42 chr5 123901991 123902473 -79183059 - MLT1K LTR MaLR -10 578 64 252 0 0 0 chr5 123902475 123902503 -79183029 + (CA)n Simple_repeat Simple_repeat 1 28 0 322 293 68 27 chr5 123903887 123904034 -79181498 - MIR SINE MIR -1 261 109 5117 68 71 7 chr5 123905882 123906589 -79178943 - L1PA7 LINE L1 -2 6152 5401 4082 96 5 22 chr5 123906588 123907253 -79178279 + L1P1 LINE L1 4787 5445 -710 * 678 313 44 42 chr5 123907491 123907776 -79177756 - L1ME3A LINE L1 -222 5948 5660 925 255 52 0 chr5 123907776 123907988 -79177544 + MER58A DNA MER1_type 1 223 -1 678 313 44 42 chr5 123907988 123908156 -79177376 - L1ME3A LINE L1 -510 5660 5494 675 154 24 0 chr5 123909132 123909255 -79176277 + L1MD2 LINE L1 6183 6308 -51 187 321 135 67 chr5 123909911 123910238 -79175294 - L2 LINE L2 0 3272 2924 222 158 0 232 chr5 123910467 123910562 -79174970 + L3 LINE CR1 430 502 -1075 436 222 46 37 chr5 123910593 123910701 -79174831 + L3 LINE CR1 1249 1357 -220 252 77 0 0 chr5 123911869 123911908 -79173624 + (A)n Simple_repeat Simple_repeat 1 39 0 412 325 126 51 chr5 123912174 123913081 -79172451 + L1MEd LINE L1 244 1363 -1127 1845 164 4 0 chr5 123913081 123913398 -79172134 + AluSx SINE Alu 1 318 0 412 325 126 51 chr5 123913398 123913488 -79172044 + L1MEd LINE L1 1363 1445 -1045 489 293 80 73 chr5 123913559 123914082 -79171450 + L1ME LINE L1 3223 3749 -2380 245 150 100 0 chr5 123914085 123914145 -79171387 - L1MC4 LINE L1 -1341 6701 6636 24 67 0 0 chr5 123914640 123914685 -79170847 + AT_rich Low_complexity Low_complexity 1 45 0 430 343 50 25 chr5 123914708 123914950 -79170582 + L1ME LINE L1 4097 4344 -1785 350 198 97 53 chr5 123914954 123915201 -79170331 + L1ME LINE L1 4377 4634 -1495 311 314 174 0 chr5 123915411 123915618 -79169914 + L1ME LINE L1 4925 5167 -962 760 199 108 39 chr5 123915621 123915852 -79169680 + L1ME3A LINE L1 5902 6148 -22 254 242 31 7 chr5 123916125 123916211 -79169321 + L1ME LINE L1 5547 5632 -513 207 222 133 56 chr5 123916368 123916458 -79169074 + MER5C DNA MER1_type 11 107 -217 427 274 103 20 chr5 123917473 123917619 -79167913 - MIR3 SINE MIR -47 161 4 371 204 65 0 chr5 123918266 123918359 -79167173 - L2 LINE L2 -2611 703 605 348 268 31 0 chr5 123918910 123919007 -79166525 + LTR28 LTR ERV1 1 100 -920 2474 191 147 55 chr5 123919067 123919756 -79165776 + LTR28 LTR ERV1 121 1020 0 228 254 134 0 chr5 123920117 123920184 -79165348 - MIR3 SINE MIR -13 195 120 241 308 19 39 chr5 123920398 123920502 -79165030 - L1ME3A LINE L1 -89 6081 5980 721 239 32 110 chr5 123920580 123920776 -79164756 - L1ME3A LINE L1 -232 5938 5783 1886 133 3 11 chr5 123920776 123921062 -79164470 - AluSx SINE Alu -22 290 7 721 239 32 110 chr5 123921062 123921237 -79164295 - L1ME3A LINE L1 -387 5783 5596 375 23 0 0 chr5 123921254 123921298 -79164234 + (A)n Simple_repeat Simple_repeat 1 44 0 1287 258 69 28 chr5 123921308 123921770 -79163762 - MLT1L LTR MaLR -41 574 94 849 216 46 80 chr5 123921837 123922273 -79163259 - L1MC5 LINE L1 -27 7934 7514 22 0 0 0 chr5 123923133 123923155 -79162377 + AT_rich Low_complexity Low_complexity 1 22 0 717 223 18 61 chr5 123923357 123923586 -79161946 + MER20 DNA MER1_type 1 219 0 234 298 112 37 chr5 123923764 123923979 -79161553 + L2 LINE L2 2651 2881 -433 579 113 0 28 chr5 123924006 123924112 -79161420 + SVA Other Other 501 603 -783 21 0 0 0 chr5 123924181 123924202 -79161330 + AT_rich Low_complexity Low_complexity 1 21 0 418 299 85 28 chr5 123924788 123924965 -79160567 + L3 LINE CR1 1192 1378 -199 657 335 239 20 chr5 123925349 123925910 -79159622 + L3 LINE CR1 363 1046 -531 284 157 121 24 chr5 123925925 123926008 -79159524 + L3 LINE CR1 1191 1281 -296 2260 119 0 0 chr5 123926942 123927252 -79158280 + AluSx SINE Alu 1 310 -2 424 279 93 8 chr5 123927322 123927451 -79158081 - MER5A DNA MER1_type 0 189 50 4109 152 18 49 chr5 123927657 123928756 -79156776 + L1M2 LINE L1 4555 5613 -678 1778 233 85 70 chr5 123928771 123929444 -79156088 - MER45R DNA AcHobo -898 683 1 310 164 18 0 chr5 123931585 123931640 -79153892 - MLT1K LTR MaLR -8 580 525 260 373 9 0 chr5 123932833 123932943 -79152589 + L2 LINE L2 3162 3272 0 488 318 78 8 chr5 123933660 123933905 -79151627 - MIR SINE MIR 0 262 1 510 324 50 25 chr5 123934065 123934306 -79151226 - MLT1L LTR MaLR 0 615 369 413 231 127 58 chr5 123934824 123934997 -79150535 + MLT1J2 LTR MaLR 262 446 -4 4264 39 0 0 chr5 123935218 123935754 -79149778 + L1PA5 LINE L1 5630 6165 0 1814 168 7 0 chr5 123937947 123938239 -79147293 + AluSx SINE Alu 1 294 -18 2789 22 0 3 chr5 123938294 123938611 -79146921 - AluYb8 SINE Alu -2 316 1 996 224 63 0 chr5 123938647 123938852 -79146680 + MER58A DNA MER1_type 7 224 0 538 309 150 20 chr5 123938888 123939289 -79146243 - MLT1L LTR MaLR -14 601 149 326 330 16 80 chr5 123939291 123939479 -79146053 + MER5B DNA MER1_type 1 176 -2 271 297 65 58 chr5 123939613 123939751 -79145781 - L2 LINE L2 -2608 706 568 201 348 96 15 chr5 123939822 123939957 -79145575 - L2 LINE L2 -912 2402 2257 228 231 90 0 chr5 123939971 123940049 -79145483 + MER94 DNA DNA 30 114 -20 224 132 79 0 chr5 123941067 123941105 -79144427 - L2 LINE L2 -9 3304 3264 250 135 0 39 chr5 123941520 123941572 -79143960 - L2 LINE L2 0 3313 3264 305 329 178 14 chr5 123941700 123941913 -79143619 + L3b LINE CR1 1103 1350 -233 204 159 0 23 chr5 123942354 123942398 -79143134 + T-rich Low_complexity Low_complexity 2 44 0 43523 39 8 3 chr5 123942401 123948514 -79137018 - L1PA3 LINE L1 -3 6152 2 2190 158 49 55 chr5 123948677 123949171 -79136361 - L1MD1 LINE L1 -329 5913 5423 847 194 0 36 chr5 123949313 123949478 -79136054 - AluJb SINE Alu -18 294 136 6760 63 6 5 chr5 123950590 123951615 -79133917 + L1PA7 LINE L1 5121 6146 -8 916 163 12 35 chr5 123951621 123951793 -79133739 + AluSg/x SINE Alu 127 294 -16 233 238 0 32 chr5 123953796 123953859 -79131673 + MER41E LTR ERV1 44 104 -408 463 284 15 8 chr5 123954462 123954596 -79130936 + MER5B DNA MER1_type 41 175 -3 276 213 71 55 chr5 123954811 123954938 -79130594 - HAL1 LINE L1 -1149 1358 1230 219 238 0 0 chr5 123955037 123955079 -79130453 + polypyrimidine Low_complexity Low_complexity 3 44 0 240 35 0 0 chr5 123955837 123955866 -79129666 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr5 123955867 123955910 -79129622 + (TG)n Simple_repeat Simple_repeat 2 44 0 299 108 47 31 chr5 123957302 123957431 -79128101 + (TA)n Simple_repeat Simple_repeat 2 132 0 24 0 0 0 chr5 123957431 123957455 -79128077 + AT_rich Low_complexity Low_complexity 1 24 0 1919 161 22 69 chr5 123957603 123958008 -79127524 - MLT1B LTR MaLR -1 389 4 431 254 94 11 chr5 123959567 123959748 -79125784 + L1MC4a LINE L1 5636 5831 -1977 295 185 19 0 chr5 123960000 123960054 -79125478 + MIR SINE MIR 205 259 -3 422 330 64 0 chr5 123960062 123960265 -79125267 + ERVL LTR ERVL 1904 2119 -3645 1748 119 53 53 chr5 123960502 123960822 -79124710 - MER44D DNA MER2_type -19 590 1 271 266 38 0 chr5 123960936 123961015 -79124517 + ERVL LTR ERVL 3470 3551 -2213 23 33 0 0 chr5 123962564 123962594 -79122938 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 123962952 123962987 -79122545 + AT_rich Low_complexity Low_complexity 1 35 0 197 125 292 0 chr5 123963101 123963149 -79122383 - MIR3 SINE MIR -37 171 110 539 321 187 18 chr5 123963302 123963906 -79121626 + HAL1 LINE L1 162 867 -1640 888 303 109 42 chr5 123964604 123965099 -79120433 + MLT1K LTR MaLR 23 550 -38 1661 125 69 43 chr5 123965099 123965403 -79120129 - AluSx SINE Alu 0 312 1 210 125 75 0 chr5 123966003 123966083 -79119449 + (TA)n Simple_repeat Simple_repeat 2 87 0 342 312 140 35 chr5 123966102 123966416 -79119116 - L3 LINE CR1 -27 1550 1204 23 0 0 0 chr5 123966454 123966477 -79119055 + AT_rich Low_complexity Low_complexity 1 23 0 327 257 0 55 chr5 123966478 123966587 -79118945 - MIR SINE MIR 0 262 160 268 212 30 15 chr5 123966875 123966941 -79118591 - L2 LINE L2 -1627 1687 1621 25810 110 9 11 chr5 123967152 123971076 -79114456 - L1P LINE L1 -2229 3917 2 2184 158 48 57 chr5 123971239 123971734 -79113798 - L1MD1 LINE L1 -329 5913 5423 847 194 0 36 chr5 123971876 123972041 -79113491 - AluJb SINE Alu -18 294 136 6760 63 6 5 chr5 123973153 123974178 -79111354 + L1PA7 LINE L1 5121 6146 -8 916 163 12 35 chr5 123974184 123974356 -79111176 + AluSg/x SINE Alu 129 296 -16 463 284 15 8 chr5 123977061 123977195 -79108337 + MER5B DNA MER1_type 41 175 -3 276 213 71 55 chr5 123977410 123977537 -79107995 - HAL1 LINE L1 -1149 1358 1230 219 238 0 0 chr5 123977636 123977678 -79107854 + polypyrimidine Low_complexity Low_complexity 3 44 0 240 35 0 0 chr5 123978436 123978465 -79107067 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 243 0 0 0 chr5 123978464 123978491 -79107041 + (TG)n Simple_repeat Simple_repeat 2 28 0 299 108 47 31 chr5 123979851 123979980 -79105552 + (TA)n Simple_repeat Simple_repeat 2 132 0 24 0 0 0 chr5 123979980 123980004 -79105528 + AT_rich Low_complexity Low_complexity 1 24 0 1919 161 22 69 chr5 123980152 123980557 -79104975 - MLT1B LTR MaLR -1 389 4 431 254 94 11 chr5 123982116 123982297 -79103235 + L1MC4a LINE L1 5636 5831 -1977 295 185 19 0 chr5 123982549 123982603 -79102929 + MIR SINE MIR 205 259 -3 454 320 64 0 chr5 123982611 123982814 -79102718 + ERVL LTR ERVL 1904 2119 -3645 1717 116 56 56 chr5 123983051 123983371 -79102161 - MER44D DNA MER2_type -19 590 1 271 266 38 0 chr5 123983485 123983564 -79101968 + ERVL LTR ERVL 3470 3551 -2213 23 33 0 0 chr5 123985113 123985143 -79100389 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr5 123985501 123985536 -79099996 + AT_rich Low_complexity Low_complexity 1 35 0 197 125 292 0 chr5 123985650 123985698 -79099834 - MIR3 SINE MIR -37 171 110 555 325 192 15 chr5 123985851 123986451 -79099081 + HAL1 LINE L1 162 867 -1640 186 309 86 0 chr5 123986453 123986534 -79098998 + MIR SINE MIR 134 221 -41 863 305 109 42 chr5 123987148 123987643 -79097889 + MLT1K LTR MaLR 23 550 -38 1660 121 68 52 chr5 123987643 123987950 -79097582 - AluSx SINE Alu 0 312 1 210 125 75 0 chr5 123988549 123988629 -79096903 + (TA)n Simple_repeat Simple_repeat 2 87 0 327 319 134 29 chr5 123988648 123988962 -79096570 - L3 LINE CR1 -27 1550 1204 23 0 0 0 chr5 123989000 123989023 -79096509 + AT_rich Low_complexity Low_complexity 1 23 0 327 257 0 55 chr5 123989024 123989133 -79096399 - MIR SINE MIR 0 262 160 1742 261 138 12 chr5 123989421 123990083 -79095449 - L2 LINE L2 -1627 1687 943 463 374 99 31 chr5 123990216 123990510 -79095022 - L2 LINE L2 0 3272 2959 * 646 377 103 11 chr5 123990502 123990937 -79094595 - L3 LINE CR1 -897 680 206 197 389 22 0 chr5 123992967 123993057 -79092475 + L2 LINE L2 3215 3306 -7 195 279 103 15 chr5 123993322 123993390 -79092142 + MIR SINE MIR 78 151 -57 753 263 85 20 chr5 123993682 123993929 -79091603 - L3b LINE CR1 -196 1387 1125 225 197 212 0 chr5 123994545 123994611 -79090921 + L1MB5 LINE L1 5743 5822 -362 1152 133 30 15 chr5 123994724 123994927 -79090605 - MER2 DNA MER2_type -139 206 1 1179 205 30 4 chr5 123994932 123995200 -79090332 + L1MB5 LINE L1 5835 6109 -65 250 158 0 0 chr5 123995289 123995347 -79090185 + L1MB4 LINE L1 6125 6183 0 261 362 38 0 chr5 123995457 123995562 -79089970 - L2 LINE L2 -19 3253 3145 24 53 0 0 chr5 123996466 123996504 -79089028 + AT_rich Low_complexity Low_complexity 1 38 0 845 223 30 93 chr5 123997807 123998107 -79087425 + MLT1E3 LTR MaLR 1 281 -343 859 206 26 18 chr5 123998112 123998552 -79086980 - MLT1D LTR MaLR -8 497 1 1211 222 13 80 chr5 123998552 123998584 -79086948 + MLT1E3 LTR MaLR 276 309 -315 1400 185 166 76 chr5 123998584 123999059 -79086473 + MLT2B1 LTR ERVL 3 520 0 1211 222 13 80 chr5 123999059 123999190 -79086342 + MLT1E3 LTR MaLR 309 447 -177 1517 194 7 23 chr5 123999190 123999489 -79086043 + AluJb SINE Alu 1 294 -18 1211 222 13 80 chr5 123999489 123999698 -79085834 + MLT1E3 LTR MaLR 447 624 0 21 0 0 0 chr5 123999734 123999755 -79085777 + AT_rich Low_complexity Low_complexity 1 21 0 461 151 94 19 chr5 124000315 124000421 -79085111 - L1ME1 LINE L1 -498 5793 5680 * 508 226 71 33 chr5 124000372 124000584 -79084948 + L1ME1 LINE L1 5782 6001 -165 * 1304 171 20 6 chr5 124000415 124000763 -79084769 + L1MA9 LINE L1 5838 6286 -26 183 80 0 0 chr5 124001101 124001126 -79084406 + (CA)n Simple_repeat Simple_repeat 2 26 0 3982 284 81 25 chr5 124001526 124002943 -79082589 + L2 LINE L2 18 1512 -1802 232 309 60 18 chr5 124002981 124003149 -79082383 + LTR67 LTR ERVL 382 556 -1 358 337 49 40 chr5 124003600 124004069 -79081463 + HAL1b LINE L1 237 709 -639 3388 152 15 15 chr5 124004522 124005129 -79080403 + Tigger1 DNA MER2_type 1 607 -1811 217 289 0 53 chr5 124005202 124005278 -79080254 + L2 LINE L2 3199 3270 -2 7525 54 2 0 chr5 124005359 124007067 -79078465 - L1PA5 LINE L1 -18 6136 4426 1896 125 3 6 chr5 124007067 124007379 -79078153 + Tigger1 DNA MER2_type 609 919 -1499 4520 135 20 20 chr5 124007389 124007926 -79077606 + Tigger1 DNA MER2_type 1608 2148 -270 1974 130 7 0 chr5 124007926 124008246 -79077286 + AluSq SINE Alu 1 322 0 4520 135 20 20 chr5 124008246 124008517 -79077015 + Tigger1 DNA MER2_type 2147 2417 -1 1244 66 0 6 chr5 124008609 124008776 -79076756 - L1PA8 LINE L1 0 6172 6007 1273 167 8 38 chr5 124008776 124009006 -79076526 - AluJb SINE Alu -24 288 64 21 57 0 0 chr5 124009400 124009435 -79076097 + AT_rich Low_complexity Low_complexity 1 35 0 227 261 22 22 chr5 124009741 124009875 -79075657 + L1M4 LINE L1 4206 4339 -1807 8572 31 2 1 chr5 124010086 124011900 -79073632 + L1PA3 LINE L1 4356 6171 0 339 333 0 8 chr5 124013152 124013272 -79072260 + GA-rich Low_complexity Low_complexity 2 120 0 309 303 39 45 chr5 124013280 124013435 -79072097 + HAL1b LINE L1 1193 1346 -2 4948 143 40 25 chr5 124014730 124015541 -79069991 - L1PA15 LINE L1 -6 6159 5319 466 59 29 0 chr5 124015541 124015609 -79069923 - L1PA8 LINE L1 -7 6165 6096 4948 143 40 25 chr5 124015609 124016047 -79069485 - L1PA15 LINE L1 -846 5319 4889 788 196 0 0 chr5 124016063 124016231 -79069301 + L1PA7 LINE L1 2584 2751 -4098 10319 92 15 1 chr5 124016234 124017166 -79068366 + L1PA7 LINE L1 4545 5463 -1394 216 0 0 0 chr5 124017166 124017190 -79068342 + (TA)n Simple_repeat Simple_repeat 1 24 0 10319 92 15 1 chr5 124017190 124018530 -79067002 + L1PA7 LINE L1 5463 6853 -4 180 0 0 0 chr5 124018556 124018576 -79066956 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 386 263 172 73 chr5 124018702 124019074 -79066458 + MLT1I LTR MaLR 1 409 0 25 31 0 0 chr5 124019210 124019242 -79066290 + AT_rich Low_complexity Low_complexity 1 32 0 526 322 91 6 chr5 124019619 124019939 -79065593 + LTR33 LTR ERVL 118 464 -57 270 209 38 19 chr5 124020129 124020287 -79065245 + (TA)n Simple_repeat Simple_repeat 1 161 0 38448 86 17 11 chr5 124020299 124020801 -79064731 - HERVL-A2 LTR ERVL -153 5501 5003 2745 10 0 13 chr5 124020801 124021109 -79064423 + AluYa5 SINE Alu 1 304 -7 38448 86 17 11 chr5 124021109 124026076 -79059456 - HERVL-A2 LTR ERVL -651 5003 1 3285 83 20 2 chr5 124026076 124026521 -79059011 - MLT2A2 LTR ERVL 0 453 1 953 221 21 45 chr5 124026571 124026807 -79058725 + L1M1 LINE L1 2986 3211 -4354 2694 39 0 0 chr5 124026807 124027116 -79058416 + AluY SINE Alu 1 309 -2 953 221 21 45 chr5 124027116 124027254 -79058278 + L1M1 LINE L1 3211 3351 -4214 428 88 0 0 chr5 124027274 124027331 -79058201 - AluSc SINE Alu -23 286 230 1027 149 6 0 chr5 124027550 124027718 -79057814 + L1PA14 LINE L1 1 169 -7412 1906 148 7 0 chr5 124027719 124027997 -79057535 + AluSx SINE Alu 1 280 -32 14968 145 7 7 chr5 124028015 124030408 -79055124 + L1PA14 LINE L1 146 2537 -5044 12696 187 18 24 chr5 124030402 124032589 -79052943 + L1PA14 LINE L1 3452 5651 -1933 * 2517 111 24 14 chr5 124032589 124032960 -79052572 + THE1C LTR MaLR 1 375 0 9291 129 43 42 chr5 124032960 124034538 -79050994 + THE1C-int LTR MaLR 1 1580 0 2761 87 3 18 chr5 124034538 124034919 -79050613 + THE1C LTR MaLR 1 375 0 12696 187 18 24 chr5 124034919 124035754 -79049778 + L1PA14 LINE L1 5648 6452 -1132 484 184 20 31 chr5 124035756 124035854 -79049678 + AluS SINE Alu 1 97 -215 801 103 0 66 chr5 124035949 124036085 -79049447 + AluSg/x SINE Alu 156 282 -30 5850 130 8 1 chr5 124036100 124037246 -79048286 + L1PA14 LINE L1 6431 7582 -17 472 247 41 55 chr5 124037311 124037457 -79048075 + MER5B DNA MER1_type 29 172 -6 866 165 106 0 chr5 124037476 124037646 -79047886 + MER5A DNA MER1_type 2 189 0 222 91 0 0 chr5 124037950 124037983 -79047549 + (GGGA)n Simple_repeat Simple_repeat 3 35 0 373 246 80 29 chr5 124038859 124038997 -79046535 - MIR SINE MIR 0 262 118 194 241 69 17 chr5 124040859 124040917 -79044615 + L2 LINE L2 3159 3219 -94 201 347 14 0 chr5 124042050 124042122 -79043410 - L3b LINE CR1 -86 1497 1425 986 174 26 32 chr5 124042330 124042520 -79043012 - MER5A DNA MER1_type 0 189 1 1490 221 59 63 chr5 124042532 124043182 -79042350 - LTR68 LTR ERV1 -33 707 1 790 215 42 23 chr5 124043296 124043557 -79041975 + LTR37B LTR ERV1 198 463 -5 267 152 0 0 chr5 124044646 124044692 -79040840 + (CA)n Simple_repeat Simple_repeat 1 46 0 1454 223 94 42 chr5 124046391 124046871 -79038661 - MLT1D LTR MaLR 0 505 1 1598 287 114 43 chr5 124047020 124047346 -79038186 + HAL1 LINE L1 417 718 -1789 5793 184 83 10 chr5 124047346 124048700 -79036832 - Charlie1a DNA MER1_type -1 1454 1 1598 287 114 43 chr5 124048700 124048800 -79036732 + HAL1 LINE L1 718 809 -1698 2266 217 37 57 chr5 124048800 124049417 -79036115 - MER77 LTR ERV1 0 605 1 1598 287 114 43 chr5 124049417 124050244 -79035288 + HAL1 LINE L1 809 1760 -747 1794 120 14 0 chr5 124050278 124050561 -79034971 + L1MA5A LINE L1 6008 6294 -3 26 0 0 0 chr5 124050578 124050604 -79034928 + AT_rich Low_complexity Low_complexity 1 26 0 433 316 85 19 chr5 124050671 124050883 -79034649 - MIR SINE MIR -36 226 1 214 302 0 0 chr5 124051059 124051122 -79034410 + L2 LINE L2 3250 3312 -1 22 35 0 0 chr5 124051528 124051557 -79033975 + AT_rich Low_complexity Low_complexity 1 29 0 431 364 120 0 chr5 124052655 124052897 -79032635 - L2 LINE L2 -571 2743 2473 1111 136 32 108 chr5 124053335 124053585 -79031947 + Tigger1 DNA MER2_type 1 231 -2187 311 229 24 0 chr5 124053587 124053670 -79031862 - MER69 DNA AcHobo -91 2435 2351 1893 160 0 0 chr5 124054419 124054700 -79030832 - AluSx SINE Alu -31 281 1 24 53 0 0 chr5 124054896 124054934 -79030598 + AT_rich Low_complexity Low_complexity 1 38 0 1845 187 61 65 chr5 124055552 124056075 -79029457 - MER69 DNA AcHobo -165 2361 1841 2507 218 52 78 chr5 124056081 124056846 -79028686 - MER69 DNA AcHobo -1781 745 1 7399 176 34 3 chr5 124056981 124059216 -79026316 - L1PA13 LINE L1 0 6163 3872 2373 137 13 11 chr5 124059217 124059590 -79025942 + Tigger1 DNA MER2_type 219 592 -1826 1541 158 23 0 chr5 124059588 124059854 -79025678 + Tigger1 DNA MER2_type 2147 2418 0 * 2298 106 3 0 chr5 124060048 124060351 -79025181 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr5 124060502 124060530 -79025002 + AT_rich Low_complexity Low_complexity 1 28 0 4054 200 47 13 chr5 124060807 124062219 -79023313 + L1MB7 LINE L1 4735 6183 -1 695 218 89 28 chr5 124062214 124062462 -79023070 + L1ME3A LINE L1 5688 5950 -220 * 2096 81 0 15 chr5 124063503 124063774 -79021758 + AluSx SINE Alu 35 301 -11 1583 138 13 4 chr5 124064098 124064337 -79021195 - AluSx SINE Alu -18 294 54 1799 102 43 51 chr5 124064345 124064718 -79020814 - L1PB1 LINE L1 0 6151 5782 189 0 0 0 chr5 124064718 124064739 -79020793 + (TA)n Simple_repeat Simple_repeat 1 21 0 249 234 0 43 chr5 124064739 124064833 -79020699 - L1MC4 LINE L1 -1339 6703 6614 * 3612 125 15 4 chr5 124064830 124065598 -79019934 - L1P5 LINE L1 -360 5791 5015 427 190 52 43 chr5 124067190 124067306 -79018226 + L1MA2 LINE L1 16 132 -7433 1734 203 0 0 chr5 124067306 124067602 -79017930 + AluJb SINE Alu 1 296 -16 7144 49 0 3 chr5 124067624 124068672 -79016860 - L1PA5 LINE L1 -4 6150 5104 15365 149 35 20 chr5 124068673 124072174 -79013358 + L1MA2 LINE L1 1954 5584 -2139 2027 130 27 10 chr5 124072174 124072473 -79013059 - AluSg SINE Alu -6 304 1 15365 149 35 20 chr5 124072473 124074646 -79010886 + L1MA2 LINE L1 5584 7723 0 966 57 0 0 chr5 124075003 124075125 -79010407 - L1PA2 LINE L1 -2 6153 6032 1082 107 30 0 chr5 124076311 124076480 -79009052 - L1PA13 LINE L1 -4 6159 5986 1297 199 159 49 chr5 124076480 124076908 -79008624 + L1MC4 LINE L1 6725 7199 -843 363 303 103 15 chr5 124077053 124077248 -79008284 + MLT1K LTR MaLR 377 588 0 180 0 0 0 chr5 124077670 124077690 -79007842 + (TG)n Simple_repeat Simple_repeat 2 21 0 2446 57 0 0 chr5 124078048 124078346 -79007186 + AluY SINE Alu 1 298 -13 207 114 0 0 chr5 124079285 124079320 -79006212 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 24 32 0 0 chr5 124080123 124080154 -79005378 + AT_rich Low_complexity Low_complexity 1 31 0 316 354 39 22 chr5 124080273 124080451 -79005081 + HAL1b LINE L1 55 235 -1113 1655 167 23 30 chr5 124080457 124080756 -79004776 + AluJb SINE Alu 1 297 -15 227 322 0 26 chr5 124080780 124080895 -79004637 + HAL1b LINE L1 292 403 -945 745 170 50 14 chr5 124080962 124081103 -79004429 + MER106B DNA MER1_type 1 146 -913 21 89 0 0 chr5 124081109 124081165 -79004367 + AT_rich Low_complexity Low_complexity 1 56 0 625 256 29 75 chr5 124081207 124081488 -79004044 + L1MC5 LINE L1 6751 7018 -943 3072 223 96 57 chr5 124081662 124082747 -79002785 + L1MC4 LINE L1 6241 6359 0 196 273 106 0 chr5 124082837 124082903 -79002629 + MIR SINE MIR 152 224 -38 684 253 7 0 chr5 124082911 124083061 -79002471 + MER106B DNA MER1_type 2 152 -907 548 330 135 9 chr5 124083658 124083976 -79001556 + HERVL LTR ERVL 4621 4978 -786 189 234 0 21 chr5 124084166 124084213 -79001319 + MIR SINE MIR 146 191 -71 414 304 17 0 chr5 124084237 124084385 -79001147 + HERVL LTR ERVL 5175 5301 -353 3321 116 71 12 chr5 124084732 124085304 -79000228 + Tigger3(Golem) DNA MER2_type 2138 2743 -286 661 208 47 41 chr5 124085304 124085530 -79000002 - LTR45 LTR ERV1 0 602 390 1447 178 71 7 chr5 124085823 124086104 -78999428 + Tigger3(Golem) DNA MER2_type 2730 3028 -1 257 214 22 45 chr5 124086110 124086199 -78999333 + LTR16C LTR ERVL 354 440 -51 239 369 29 0 chr5 124087121 124087224 -78998308 + L2 LINE L2 3180 3285 -28 226 270 124 11 chr5 124088140 124088229 -78997303 + L2 LINE L2 3203 3301 -12 808 270 57 55 chr5 124088288 124088743 -78996789 + LTR16A1 LTR ERVL 2 457 0 191 245 213 32 chr5 124090024 124090118 -78995414 + MIR SINE MIR 24 134 -128 244 270 130 76 chr5 124091469 124091654 -78993878 - MLT1H LTR MaLR -271 278 84 327 323 127 49 chr5 124091727 124092074 -78993458 + L1MC4a LINE L1 5636 6009 -1799 2218 108 0 0 chr5 124092157 124092454 -78993078 + AluSg SINE Alu 1 297 -13 197 298 98 37 chr5 124093101 124093283 -78992249 - MIR3 SINE MIR -16 246 3 353 250 0 0 chr5 124094316 124094384 -78991148 - L2 LINE L2 -6 3266 3199 838 227 83 19 chr5 124094404 124094839 -78990693 + MLT1F1 LTR MaLR 24 567 0 290 261 52 52 chr5 124094851 124094985 -78990547 - L2 LINE L2 -86 3227 3094 1053 231 111 0 chr5 124095063 124095387 -78990145 + Charlie1b DNA MER1_type 164 523 0 269 315 67 45 chr5 124095388 124095566 -78989966 - L2 LINE L2 -505 2809 2628 1609 187 16 10 chr5 124097785 124098095 -78987437 - AluJo SINE Alu 0 312 1 823 216 22 57 chr5 124099110 124099337 -78986195 - MER20 DNA MER1_type 0 219 1 2530 165 32 21 chr5 124099745 124100211 -78985321 + MER70A LTR ERVL 2 472 0 1895 145 25 77 chr5 124103543 124103944 -78981588 + MLT1B LTR MaLR 11 390 0 202 236 36 36 chr5 124104543 124104598 -78980934 + MIR SINE MIR 89 143 -65 720 76 19 0 chr5 124105694 124105799 -78979733 + L1MA3 LINE L1 6199 6305 0 35 0 0 0 chr5 124105799 124105834 -78979698 + AT_rich Low_complexity Low_complexity 1 35 0 603 122 0 11 chr5 124106322 124106412 -78979120 + AluY SINE Alu 210 298 -13 378 373 11 0 chr5 124106412 124106589 -78978943 + MLT1K LTR MaLR 11 189 -399 258 200 106 71 chr5 124110081 124110166 -78975366 - MIR3 SINE MIR -15 193 106 932 263 24 28 chr5 124110189 124110444 -78975088 + MIR SINE MIR 7 260 -2 260 333 0 0 chr5 124110456 124110519 -78975013 - MIR SINE MIR -126 82 20 234 269 0 0 chr5 124110617 124110669 -78974863 + L2 LINE L2 3217 3268 -4 233 261 15 0 chr5 124110822 124110887 -78974645 + (TA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr5 124110947 124110974 -78974558 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 25 65 0 0 chr5 124111059 124111105 -78974427 + AT_rich Low_complexity Low_complexity 1 46 0 216 0 0 0 chr5 124111191 124111215 -78974317 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 16994 29 1 1 chr5 124111224 124114015 -78971517 - L1PA3 LINE L1 -4 6151 3358 1489 248 105 8 chr5 124114475 124114994 -78970538 + MLT1F1 LTR MaLR 1 565 -2 21 0 0 0 chr5 124115035 124115056 -78970476 + AT_rich Low_complexity Low_complexity 1 21 0 250 228 18 0 chr5 124115207 124115264 -78970268 + GA-rich Low_complexity Low_complexity 3 60 0 2308 148 3 4 chr5 124115266 124115438 -78970094 + L1MD3 LINE L1 7046 7217 -778 16272 134 24 18 chr5 124115438 124116112 -78969420 - Tigger4(Zombi) DNA MER2_type 0 2731 2062 2257 108 0 3 chr5 124116112 124116418 -78969114 + AluSg SINE Alu 1 305 -5 16272 134 24 18 chr5 124116418 124118458 -78967074 - Tigger4(Zombi) DNA MER2_type -669 2062 2 2308 148 3 4 chr5 124118458 124118846 -78966686 + L1MD3 LINE L1 7217 7796 -199 646 245 27 27 chr5 124118884 124119068 -78966464 - MLT1D LTR MaLR -321 184 1 360 254 18 0 chr5 124119068 124119178 -78966354 + L1MD3 LINE L1 7884 7995 0 261 0 0 0 chr5 124119538 124119567 -78965965 + (TA)n Simple_repeat Simple_repeat 1 29 0 341 301 11 11 chr5 124121694 124121787 -78963745 + MIR SINE MIR 20 112 -150 642 275 168 44 chr5 124121840 124122298 -78963234 + MLT1H LTR MaLR 35 549 0 359 237 21 11 chr5 124122300 124122393 -78963139 + MIR SINE MIR 160 253 -9 451 268 113 58 chr5 124122556 124122847 -78962685 - MLT1K LTR MaLR -108 480 174 1745 181 31 3 chr5 124123307 124123599 -78961933 - AluJb SINE Alu -12 300 1 180 327 0 18 chr5 124123684 124123739 -78961793 - L3 LINE CR1 -4 1573 1520 189 361 69 21 chr5 124123862 124124006 -78961526 - L3 LINE CR1 -461 1116 966 2022 116 0 11 chr5 124124027 124124302 -78961230 + AluSx SINE Alu 1 272 -40 792 319 152 41 chr5 124124487 124125264 -78960268 - L3 LINE CR1 -591 986 124 25 0 0 0 chr5 124125606 124125631 -78959901 + AT_rich Low_complexity Low_complexity 1 25 0 2316 94 7 0 chr5 124126380 124126677 -78958855 + AluSx SINE Alu 1 299 -13 247 105 0 0 chr5 124126812 124126850 -78958682 + Alu SINE Alu 1 38 -264 1402 136 50 9 chr5 124126856 124127077 -78958455 + AluSg/x SINE Alu 78 307 -5 371 100 50 33 chr5 124127114 124127234 -78958298 + (TATAA)n Simple_repeat Simple_repeat 1 122 0 26 30 0 0 chr5 124127527 124127560 -78957972 + AT_rich Low_complexity Low_complexity 1 33 0 2030 115 24 7 chr5 124128217 124128505 -78957027 + AluSx SINE Alu 1 293 -19 491 325 65 36 chr5 124128674 124129194 -78956338 + L1MEd LINE L1 425 959 -5571 323 293 149 53 chr5 124129207 124129395 -78956137 + L1MEd LINE L1 1004 1209 -5321 298 191 209 0 chr5 124129477 124129587 -78955945 + L1MEd LINE L1 1306 1438 -5092 439 280 18 18 chr5 124129815 124129983 -78955549 + L1MEd LINE L1 1848 2026 -4525 577 212 168 7 chr5 124129989 124130126 -78955406 - MER5A DNA MER1_type -22 167 9 28 19 0 56 chr5 124130396 124130428 -78955104 + AT_rich Low_complexity Low_complexity 1 30 -21 1984 169 0 0 chr5 124130428 124130730 -78954802 - AluJb SINE Alu -10 302 1 28 19 0 56 chr5 124130730 124130751 -78954781 + AT_rich Low_complexity Low_complexity 30 51 0 2341 97 0 3 chr5 124130754 124131054 -78954478 - AluSq SINE Alu -14 299 1 1138 278 85 51 chr5 124131127 124131387 -78954145 + L1MEd LINE L1 2367 2617 -3923 1733 170 103 0 chr5 124131387 124131716 -78953816 + MLT1A1 LTR MaLR 1 363 -2 1138 278 85 51 chr5 124131716 124131958 -78953574 + L1MEd LINE L1 2617 2849 -3691 1847 171 0 10 chr5 124131958 124132263 -78953269 + AluJb SINE Alu 1 302 -10 2316 86 0 19 chr5 124132265 124132580 -78952952 + AluSc SINE Alu 1 309 0 1138 278 85 51 chr5 124132580 124132598 -78952934 + L1MEd LINE L1 2849 2865 -3675 198 0 0 0 chr5 124132598 124132620 -78952912 + (GA)n Simple_repeat Simple_repeat 2 23 0 1138 278 85 51 chr5 124132620 124133015 -78952517 + L1MEd LINE L1 2865 3318 -3222 409 296 62 19 chr5 124133916 124134223 -78951309 + L1MEd LINE L1 3723 4042 -2498 22 35 0 0 chr5 124134953 124134982 -78950550 + AT_rich Low_complexity Low_complexity 1 29 0 558 213 55 27 chr5 124135068 124135251 -78950281 + L1MEd LINE L1 4199 4386 -2154 1255 198 68 47 chr5 124135311 124135716 -78949816 - MLT2B1 LTR ERVL -68 452 1 259 239 15 0 chr5 124135732 124135799 -78949733 + L1MEd LINE L1 4944 5011 -1529 413 152 25 0 chr5 124135824 124135903 -78949629 + HSMAR2 DNA Mariner 660 740 -562 288 290 11 0 chr5 124136071 124136164 -78949368 + L1MEd LINE L1 5141 5234 -1306 1159 199 234 26 chr5 124136440 124136858 -78948674 - MLT1D LTR MaLR 0 505 1 238 345 81 14 chr5 124137317 124137526 -78948006 - MIR SINE MIR -12 250 28 2360 117 50 8 chr5 124137548 124137908 -78947624 - THE1C LTR MaLR 0 375 1 441 129 47 0 chr5 124138193 124138278 -78947254 - L1MA10 LINE L1 0 6334 6246 229 309 37 15 chr5 124138525 124138661 -78946871 + L2 LINE L2 2764 2902 -412 1116 167 111 4 chr5 124138721 124138911 -78946621 + MER33 DNA MER1_type 25 254 -2331 2226 91 6 28 chr5 124138911 124139229 -78946303 - AluSq SINE Alu -1 312 2 1116 167 111 4 chr5 124139229 124139308 -78946224 + MER33 DNA MER1_type 254 323 -1 336 257 101 9 chr5 124139405 124139514 -78946018 + L2 LINE L2 3193 3311 -2 269 282 90 0 chr5 124141666 124141744 -78943788 - L2 LINE L2 -44 3228 3144 1899 119 18 11 chr5 124143592 124143878 -78941654 + AluSx SINE Alu 21 308 -4 287 268 134 26 chr5 124145423 124145617 -78939915 + L2 LINE L2 2848 3062 -251 555 247 157 0 chr5 124145726 124145904 -78939628 - MER58C DNA MER1_type -3 212 7 289 261 170 39 chr5 124146181 124146334 -78939198 - MIR SINE MIR -75 187 15 587 272 63 42 chr5 124146441 124146830 -78938702 + LTR16A LTR ERVL 13 444 -6 431 266 64 85 chr5 124147036 124147224 -78938308 - L3 LINE CR1 -991 586 403 274 214 0 0 chr5 124147913 124147969 -78937563 - MER3 DNA MER1_type -153 56 1 192 152 0 0 chr5 124148335 124148368 -78937164 + (TATG)n Simple_repeat Simple_repeat 2 34 0 907 94 123 0 chr5 124148526 124148697 -78936835 + L1MA9 LINE L1 6110 6301 -11 2209 133 0 3 chr5 124151249 124151550 -78933982 + AluSx SINE Alu 1 300 -12 1013 155 78 15 chr5 124151884 124152090 -78933442 - MER20 DNA MER1_type 0 219 1 651 264 80 40 chr5 124152106 124152405 -78933127 - L2 LINE L2 -2578 736 426 251 203 51 0 chr5 124152433 124152512 -78933020 + L1ME4a LINE L1 5991 6073 -48 35 71 0 0 chr5 124161472 124161542 -78923990 + AT_rich Low_complexity Low_complexity 1 70 0 210 143 0 0 chr5 124161548 124161583 -78923949 + (TATATG)n Simple_repeat Simple_repeat 1 35 0 749 177 0 0 chr5 124161634 124161758 -78923774 - FLAM_A SINE Alu -9 124 1 611 307 137 8 chr5 124162208 124162566 -78922966 + L2 LINE L2 2282 2685 -629 2466 90 0 0 chr5 124162572 124162883 -78922649 - AluSq SINE Alu -2 311 1 25 0 0 0 chr5 124162913 124162938 -78922594 + AT_rich Low_complexity Low_complexity 1 25 0 1252 234 36 45 chr5 124162970 124163388 -78922144 - MLT1D LTR MaLR -91 414 1 5625 235 112 34 chr5 124163412 124166998 -78918534 + L1ME2 LINE L1 1841 5148 -1085 2488 43 3 3 chr5 124166998 124167299 -78918233 + AluY SINE Alu 1 301 -10 5625 235 112 34 chr5 124167299 124167619 -78917913 + L1ME2 LINE L1 5148 5442 -791 1994 124 48 0 chr5 124167619 124167909 -78917623 + AluSx SINE Alu 1 304 -8 5625 235 112 34 chr5 124167909 124168093 -78917439 + L1ME2 LINE L1 5442 6223 -10 312 248 37 52 chr5 124170649 124170820 -78914712 - Charlie8 DNA MER1_type -2216 201 22 358 271 125 56 chr5 124173006 124173150 -78912382 + MIR3 SINE MIR 48 201 -7 299 220 87 92 chr5 124174393 124174566 -78910966 - MIR SINE MIR -21 241 70 199 411 9 0 chr5 124175853 124175960 -78909572 - MIR SINE MIR -118 144 37 23 0 0 0 chr5 124176572 124176595 -78908937 + AT_rich Low_complexity Low_complexity 1 23 0 270 236 16 159 chr5 124178380 124178417 -78907115 - MIR3 SINE MIR -32 176 135 222 37 0 0 chr5 124178417 124178444 -78907088 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2248 82 7 0 chr5 124178451 124178733 -78906799 - AluSp SINE Alu -29 284 1 270 236 16 159 chr5 124178733 124178812 -78906720 - MIR3 SINE MIR -79 129 83 755 188 84 70 chr5 124178812 124179025 -78906507 - MER20 DNA MER1_type -3 216 1 270 236 16 159 chr5 124179025 124179081 -78906451 - MIR3 SINE MIR -125 83 21 203 324 27 0 chr5 124179480 124179554 -78905978 - MIR3 SINE MIR -30 178 103 524 295 59 49 chr5 124180093 124180586 -78904946 + MLT1H1 LTR MaLR 2 549 0 22 0 0 0 chr5 124180684 124180706 -78904826 + AT_rich Low_complexity Low_complexity 1 22 0 301 282 179 38 chr5 124181018 124181358 -78904174 + L2 LINE L2 511 898 -2416 560 335 104 0 chr5 124181392 124181622 -78903910 + MIR SINE MIR 9 262 0 899 352 116 17 chr5 124181650 124182462 -78903070 + L2 LINE L2 925 1816 -1498 1375 301 97 48 chr5 124182581 124183191 -78902341 - HAL1 LINE L1 -324 2183 1604 2231 106 7 3 chr5 124183191 124183492 -78902040 - AluSq SINE Alu -11 302 1 1375 301 97 48 chr5 124183492 124184365 -78901167 - HAL1 LINE L1 -903 1604 628 328 312 128 0 chr5 124184395 124184536 -78900996 - HAL1 LINE L1 -1802 705 547 613 360 121 17 chr5 124184536 124185466 -78900066 + L2 LINE L2 2036 3068 -204 412 232 30 0 chr5 124185489 124185588 -78899944 + L1ME3A LINE L1 6064 6165 -5 320 228 174 22 chr5 124187007 124187099 -78898433 + MIR SINE MIR 45 150 -58 270 333 87 20 chr5 124187605 124187755 -78897777 + MIR SINE MIR 101 260 -2 765 120 0 48 chr5 124188080 124188205 -78897327 + FLAM_C SINE Alu 1 119 -24 25 31 0 0 chr5 124188205 124188237 -78897295 + AT_rich Low_complexity Low_complexity 1 32 0 2055 108 29 20 chr5 124188246 124188552 -78896980 + AluSg SINE Alu 1 309 -1 2177 86 17 14 chr5 124188923 124189214 -78896318 + AluSp SINE Alu 3 294 -19 31 58 0 0 chr5 124189234 124189286 -78896246 + AT_rich Low_complexity Low_complexity 1 52 0 444 321 12 6 chr5 124189965 124190127 -78895405 - MIR SINE MIR -48 214 52 5432 145 20 59 chr5 124192009 124193235 -78892297 + L1PA16 LINE L1 4540 5668 -498 2203 107 0 0 chr5 124193235 124193533 -78891999 + AluSc SINE Alu 1 298 -11 5432 145 20 59 chr5 124193533 124194012 -78891520 + L1PA16 LINE L1 5668 6164 -2 885 229 91 13 chr5 124196248 124196479 -78889053 - MIR SINE MIR 0 262 14 2285 83 3 20 chr5 124196571 124196872 -78888660 + AluSg SINE Alu 1 296 -14 2197 124 0 7 chr5 124197557 124197863 -78887669 - AluSx SINE Alu -8 304 1 2299 109 0 16 chr5 124198695 124199007 -78886525 - AluSx SINE Alu -5 307 1 2380 81 0 10 chr5 124199835 124200145 -78885387 + AluY SINE Alu 1 307 -4 24 32 0 0 chr5 124200288 124200319 -78885213 + AT_rich Low_complexity Low_complexity 1 31 0 216 271 0 0 chr5 124200383 124200431 -78885101 + MIR SINE MIR 213 260 -2 2515 65 0 3 chr5 124200837 124201146 -78884386 + AluY SINE Alu 4 311 0 1834 112 105 0 chr5 124202330 124202597 -78882935 - AluSx SINE Alu -17 295 1 1579 211 94 47 chr5 124202733 124202815 -78882717 - Charlie2 DNA MER1_type -293 2569 2492 2178 99 52 25 chr5 124202815 124203178 -78882354 + THE1C LTR MaLR 1 373 -2 1579 211 94 47 chr5 124203178 124203380 -78882152 - Charlie2 DNA MER1_type -370 2492 2301 2065 144 0 3 chr5 124203380 124203671 -78881861 - AluSx SINE Alu -22 290 1 1579 211 94 47 chr5 124203671 124204068 -78881464 - Charlie2 DNA MER1_type -561 2301 1855 389 277 128 16 chr5 124204112 124204300 -78881232 - Charlie2 DNA MER1_type -2614 248 40 1022 229 111 13 chr5 124204502 124204817 -78880715 + MER39 LTR ERV1 362 707 0 610 293 28 63 chr5 124205035 124205288 -78880244 + MIR SINE MIR 15 258 -4 359 203 278 21 chr5 124256063 124256250 -78829282 + L2 LINE L2 2137 2371 -943 251 349 64 38 chr5 124256257 124256492 -78829040 + L2 LINE L2 2736 2976 -338 1126 77 117 5 chr5 124256542 124256738 -78828794 + MER21A LTR ERV1 1 218 -713 648 261 12 6 chr5 124256817 124256978 -78828554 + MER21B LTR ERV1 279 440 -423 487 202 19 10 chr5 124256987 124257091 -78828441 + MER21A LTR ERV1 579 683 -248 291 308 142 0 chr5 124257239 124257359 -78828173 + L2 LINE L2 3136 3272 0 219 203 0 0 chr5 124258204 124258263 -78827269 + (TA)n Simple_repeat Simple_repeat 2 60 0 896 125 33 7 chr5 124258346 124258498 -78827034 - L1PA13 LINE L1 0 6163 6008 392 327 56 92 chr5 124259649 124260156 -78825376 - L2 LINE L2 -191 3081 2605 420 240 10 0 chr5 124260223 124260323 -78825209 - MER94 DNA DNA -33 101 1 307 267 69 26 chr5 124260334 124260450 -78825082 - L2 LINE L2 -789 2525 2405 1244 261 57 59 chr5 124260472 124261000 -78824532 + Charlie2 DNA MER1_type 28 554 -2228 1302 231 94 24 chr5 124261133 124261592 -78823940 + Charlie2a DNA MER1_type 1474 1964 -898 417 195 0 0 chr5 124261660 124261742 -78823790 + Charlie2a DNA MER1_type 2207 2288 -574 5675 141 22 30 chr5 124261743 124263409 -78822123 - L1PB1 LINE L1 -4 6863 5217 6501 149 59 39 chr5 124263409 124264662 -78820870 - L1PB1 LINE L1 -2088 4774 3548 807 98 89 0 chr5 124264662 124264774 -78820758 + AluSq/x SINE Alu 1 122 -191 6501 149 59 39 chr5 124264774 124266664 -78818868 - L1PB1 LINE L1 -3314 3548 1392 817 209 15 10 chr5 124266661 124266857 -78818675 - L1PB1 LINE L1 -6666 197 1 * 823 253 142 10 chr5 124266865 124267344 -78818188 + Charlie2a DNA MER1_type 2278 2819 -43 879 168 0 0 chr5 124267353 124267484 -78818048 + FLAM_C SINE Alu 1 131 -2 334 262 36 0 chr5 124267516 124267600 -78817932 - L2 LINE L2 -923 2391 2305 667 309 40 5 chr5 124267636 124267837 -78817695 - MIR SINE MIR -38 224 17 546 306 87 57 chr5 124268701 124269159 -78816373 - L2 LINE L2 -1130 2184 1713 223 330 144 0 chr5 124270096 124270193 -78815339 - MIR SINE MIR -64 144 34 377 291 61 27 chr5 124270349 124270497 -78815035 + MIR SINE MIR 2 154 -108 276 311 104 25 chr5 124273897 124274268 -78811264 - L1MC/D LINE L1 -719 5432 5349 260 286 87 15 chr5 124274273 124274469 -78811063 - L1MC/D LINE L1 -1060 5086 4877 1725 235 79 12 chr5 124274876 124275446 -78810086 + MLT1E2 LTR MaLR 19 626 0 284 303 45 0 chr5 124275638 124275770 -78809762 - L1MC/D LINE L1 -1980 4166 4029 975 139 86 0 chr5 124276279 124276430 -78809102 - AluJb SINE Alu -14 298 135 301 141 0 62 chr5 124276913 124276977 -78808555 + AluS SINE Alu 223 282 -20 2258 79 3 3 chr5 124278579 124278869 -78806663 + AluSg SINE Alu 5 294 -16 2411 73 16 0 chr5 124279119 124279422 -78806110 - AluY SINE Alu -3 308 1 948 124 0 139 chr5 124279650 124279852 -78805680 + AluSq SINE Alu 1 174 -139 490 90 15 0 chr5 124279852 124279919 -78805613 + AluY SINE Alu 63 130 -181 1572 174 40 14 chr5 124280225 124280501 -78805031 + AluJo SINE Alu 6 288 -24 323 254 22 37 chr5 124281794 124281928 -78803604 + L1ME4a LINE L1 5960 6091 -30 2128 107 0 7 chr5 124284467 124284757 -78800775 - AluSx SINE Alu -17 295 8 2149 111 0 35 chr5 124284984 124285299 -78800233 + AluSx SINE Alu 1 304 -8 878 145 12 18 chr5 124285663 124285829 -78799703 + L1MB3 LINE L1 6016 6180 -3 711 187 0 0 chr5 124286719 124286842 -78798690 + FLAM_C SINE Alu 1 123 -10 364 230 0 0 chr5 124287310 124287384 -78798148 + MIR SINE MIR 157 230 -32 598 209 131 0 chr5 124288629 124288782 -78796750 - MLT1E2 LTR MaLR 0 626 454 503 292 7 0 chr5 124288782 124288926 -78796606 - LTR53 LTR ERVL -374 145 1 182 88 0 29 chr5 124289107 124289141 -78796391 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 283 279 91 79 chr5 124289859 124290024 -78795508 - L2 LINE L2 0 3272 3106 744 231 58 0 chr5 124291992 124292165 -78793367 - MIR SINE MIR 0 262 80 3496 259 235 12 chr5 124292244 124293874 -78791658 + L2 LINE L2 839 2832 -482 262 330 0 18 chr5 124294038 124294147 -78791385 + MLT-int LTR MaLR 410 516 -1219 639 62 0 0 chr5 124295042 124295122 -78790410 - AluY SINE Alu -16 295 216 291 354 31 66 chr5 124295360 124295617 -78789915 - L2 LINE L2 -461 2853 2606 632 230 128 76 chr5 124295672 124296116 -78789416 + MLT1G1 LTR MaLR 45 595 0 544 302 158 4 chr5 124296118 124296396 -78789136 - L3 LINE CR1 -801 776 456 274 75 0 0 chr5 124296513 124296553 -78788979 + Tigger3(Golem) DNA MER2_type 1932 1971 -1058 1155 215 12 8 chr5 124296569 124296820 -78788712 + AluJo SINE Alu 1 252 -60 3392 129 45 24 chr5 124296821 124297481 -78788051 + Tigger3(Golem) DNA MER2_type 2012 2685 -344 2578 100 7 17 chr5 124297555 124297975 -78787557 - L1PA7 LINE L1 0 6154 5739 6771 28 1 1 chr5 124298109 124299576 -78785956 + L1PA4 LINE L1 4551 6016 -139 9995 109 11 16 chr5 124299716 124301329 -78784203 - L1P LINE L1 -2578 3568 1964 1521 177 7 66 chr5 124301473 124301925 -78783607 - L1M4 LINE L1 -391 5793 5369 * 3501 198 30 73 chr5 124301924 124301977 -78783555 - L1M4 LINE L1 -5353 1189 1135 1892 142 75 127 chr5 124301977 124302647 -78782885 + LTR24C LTR ERV1 1 635 0 3501 198 30 73 chr5 124302647 124303501 -78782031 - L1M4 LINE L1 -5407 1135 321 13676 113 3 5 chr5 124303606 124305640 -78779892 - L1P LINE L1 -3051 3095 1067 5619 75 11 4 chr5 124305743 124306486 -78779046 - Harlequin LTR ERV1 -6148 748 1 1452 223 61 52 chr5 124306486 124306931 -78778601 - LTR2 LTR ERV1 0 449 1 10766 72 1 1 chr5 124306931 124308285 -78777247 - Harlequin LTR ERV1 0 6896 5544 859 176 0 22 chr5 124308874 124309010 -78776522 + FLAM_C SINE Alu 1 133 0 274 208 0 0 chr5 124309116 124309164 -78776368 + LTR16A LTR ERVL 1 48 -402 22125 145 33 22 chr5 124309167 124313725 -78771807 + L1M1 LINE L1 10 4622 -2943 21 36 0 0 chr5 124314646 124314674 -78770858 + AT_rich Low_complexity Low_complexity 1 28 0 440 297 123 31 chr5 124314675 124314870 -78770662 - MIR SINE MIR -3 259 47 225 0 0 0 chr5 124316094 124316119 -78769413 + (TA)n Simple_repeat Simple_repeat 2 26 0 303 303 170 16 chr5 124316344 124316532 -78769000 + MIR SINE MIR 20 236 -26 1139 114 0 12 chr5 124317056 124317222 -78768310 - AluSg/x SINE Alu -12 300 137 1808 151 49 0 chr5 124317791 124318076 -78767456 - AluJb SINE Alu -13 299 1 207 0 0 0 chr5 124318158 124318181 -78767351 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 323 234 47 28 chr5 124318271 124318378 -78767154 - L1MC4a LINE L1 -1905 5903 5795 224 341 85 39 chr5 124318454 124318583 -78766949 - MIR SINE MIR -70 192 58 270 218 36 45 chr5 124318605 124318715 -78766817 - L1MC4a LINE L1 -429 5692 5584 573 286 154 4 chr5 124319093 124319320 -78766212 + MIR SINE MIR 2 262 0 281 327 64 0 chr5 124320142 124320252 -78765280 - L2 LINE L2 0 3313 3197 204 67 0 0 chr5 124321148 124321178 -78764354 + (A)n Simple_repeat Simple_repeat 1 30 0 186 43 0 0 chr5 124321458 124321481 -78764051 + (T)n Simple_repeat Simple_repeat 1 23 0 2311 102 3 0 chr5 124321549 124321853 -78763679 - AluSq SINE Alu -8 305 1 578 207 7 64 chr5 124321991 124322131 -78763401 + MIR SINE MIR 48 179 -83 2920 96 25 7 chr5 124322131 124322536 -78762996 + L1PA13 LINE L1 5751 6162 -1 321 307 40 7 chr5 124322870 124323020 -78762512 - L1M4 LINE L1 -2399 3747 3593 2826 88 3 8 chr5 124323045 124323420 -78762112 + L1PA8 LINE L1 5800 6172 0 24 32 0 0 chr5 124323494 124323525 -78762007 + AT_rich Low_complexity Low_complexity 1 31 0 192 235 147 0 chr5 124323528 124323596 -78761936 + MIR SINE MIR 175 252 -10 480 115 11 46 chr5 124323603 124323690 -78761842 + MLT1D LTR MaLR 347 430 -75 1541 178 46 14 chr5 124324133 124324414 -78761118 + AluJo SINE Alu 6 295 -17 187 256 64 64 chr5 124324582 124324660 -78760872 - MIR SINE MIR -111 97 20 396 0 0 0 chr5 124324701 124324745 -78760787 + (CA)n Simple_repeat Simple_repeat 2 45 0 1725 174 6 22 chr5 124324800 124325111 -78760421 + AluJb SINE Alu 1 306 -6 2390 71 0 0 chr5 124325112 124325418 -78760114 + AluY SINE Alu 2 307 0 819 265 89 26 chr5 124325973 124326286 -78759246 + MER46C DNA MER2_type 1 333 -5 22 35 0 0 chr5 124326510 124326539 -78758993 + AT_rich Low_complexity Low_complexity 1 29 0 1070 208 53 0 chr5 124326612 124326819 -78758713 + MER20 DNA MER1_type 1 218 -1 1117 184 191 82 chr5 124327229 124327717 -78757815 + MER34B LTR ERV1 16 556 -9 28 71 0 0 chr5 124328156 124328212 -78757320 + AT_rich Low_complexity Low_complexity 1 56 0 415 315 8 8 chr5 124329775 124329905 -78755627 - L2 LINE L2 0 3313 3184 514 151 41 89 chr5 124329905 124330051 -78755481 + MER53 DNA DNA 1 139 -50 706 245 161 27 chr5 124330344 124330679 -78754853 + MLT1J1 LTR MaLR 40 419 -27 631 261 32 22 chr5 124330937 124331181 -78754351 + MLT1H LTR MaLR 301 549 0 23 0 0 0 chr5 124332515 124332538 -78752994 + AT_rich Low_complexity Low_complexity 1 23 0 2245 112 0 3 chr5 124332991 124333287 -78752245 - AluY SINE Alu -16 295 1 1219 194 23 102 chr5 124334472 124334863 -78750669 - MLT1A2 LTR MaLR -4 370 11 203 258 121 0 chr5 124335432 124335498 -78750034 - MIR3 SINE MIR -9 199 126 358 216 85 85 chr5 124336264 124336300 -78749232 - L1MC5 LINE L1 -45 7916 7881 2352 106 0 0 chr5 124336300 124336602 -78748930 + AluSx SINE Alu 1 302 -10 358 216 85 85 chr5 124336602 124336718 -78748814 - L1MC5 LINE L1 -79 7882 7764 1056 130 17 6 chr5 124337529 124337706 -78747826 - Tigger7 DNA MER2_type -22 2469 2291 451 229 30 57 chr5 124337709 124337971 -78747561 - Tigger7 DNA MER2_type -1986 501 247 1051 196 100 25 chr5 124338094 124338334 -78747198 - MER82 DNA MER2_type -395 258 1 2488 272 80 64 chr5 124338477 124338933 -78746599 + HAL1 LINE L1 314 761 -1746 513 0 0 0 chr5 124338933 124338990 -78746542 + (CA)n Simple_repeat Simple_repeat 2 58 0 2488 272 80 64 chr5 124338990 124339239 -78746293 + HAL1 LINE L1 761 1005 -1502 2000 140 7 0 chr5 124339239 124339524 -78746008 + AluSx SINE Alu 3 289 -23 2488 272 80 64 chr5 124339524 124340231 -78745301 + HAL1 LINE L1 1005 1749 -758 274 266 25 0 chr5 124340235 124340314 -78745218 - MLT1J LTR MaLR -13 498 418 580 280 103 60 chr5 124340344 124340644 -78744888 + HAL1 LINE L1 2183 2495 -12 237 188 104 0 chr5 124341220 124341268 -78744264 + L1ME LINE L1 5760 5812 -309 1028 297 46 14 chr5 124343137 124343484 -78742048 + LTR16A LTR ERVL 26 383 -67 1356 207 71 60 chr5 124343908 124344290 -78741242 + MLT1B LTR MaLR 1 386 -4 847 225 0 6 chr5 124346046 124346219 -78739313 - MLT1C LTR MaLR 0 467 296 * 854 136 38 0 chr5 124346217 124346349 -78739183 - MLT1C LTR MaLR -301 166 30 2294 77 6 50 chr5 124346514 124346655 -78738877 + AluSg SINE Alu 1 147 -163 2212 107 0 0 chr5 124346655 124346968 -78738564 + AluSc SINE Alu 1 309 0 2294 77 6 50 chr5 124346968 124347149 -78738383 + AluSg SINE Alu 147 309 -1 564 299 34 11 chr5 124347161 124347338 -78738194 + MIR SINE MIR 17 197 -65 422 227 159 15 chr5 124347361 124347493 -78738039 - MIR SINE MIR -111 151 1 225 226 32 0 chr5 124350341 124350403 -78735129 - LTR33 LTR ERVL -417 104 41 3768 157 136 15 chr5 124351109 124351886 -78733646 + MER4D LTR ERV1 1 871 -32 272 301 37 59 chr5 124352897 124353033 -78732499 + MIR3 SINE MIR 42 174 -34 228 260 21 52 chr5 124353127 124353223 -78732309 + MIR SINE MIR 18 110 -152 639 189 5 110 chr5 124354641 124354832 -78730700 - FAM SINE Alu -2 173 3 445 335 144 0 chr5 124354872 124355150 -78730382 + L2 LINE L2 2575 2892 -422 197 287 20 0 chr5 124355323 124355424 -78730108 + GA-rich Low_complexity Low_complexity 3 105 0 237 241 0 19 chr5 124355525 124355579 -78729953 + GA-rich Low_complexity Low_complexity 1 53 0 1978 118 0 11 chr5 124355829 124356133 -78729399 + AluSx SINE Alu 6 306 0 680 297 24 19 chr5 124356177 124356281 -78729251 - MER58C DNA MER1_type -2207 213 111 12412 76 6 1 chr5 124356281 124358607 -78726925 - L1PA7 LINE L1 -7 6147 3811 1858 131 33 0 chr5 124358609 124358761 -78726771 - AluSx SINE Alu -28 284 118 297 0 0 0 chr5 124358761 124358794 -78726738 + (TG)n Simple_repeat Simple_repeat 2 34 0 1858 131 33 0 chr5 124358794 124358916 -78726616 - AluSx SINE Alu -194 118 1 680 297 24 19 chr5 124358916 124359020 -78726512 - MER58C DNA MER1_type -2309 111 1 438 223 122 36 chr5 124359650 124359789 -78725743 - MIR SINE MIR -71 191 41 5763 172 38 16 chr5 124360000 124361485 -78724047 + L1PA16 LINE L1 4126 5638 -528 1682 97 39 23 chr5 124361485 124361742 -78723790 + L1PA16 LINE L1 5904 6164 -2 23 54 0 0 chr5 124362190 124362227 -78723305 + AT_rich Low_complexity Low_complexity 1 37 0 407 145 0 0 chr5 124362287 124362349 -78723183 - MIR3 SINE MIR -21 187 126 252 305 121 21 chr5 124363992 124364133 -78721399 + L3b LINE CR1 1132 1286 -297 199 250 0 62 chr5 124366161 124366225 -78719307 - MIR SINE MIR -83 179 120 2144 80 62 0 chr5 124366225 124366501 -78719031 + AluSp SINE Alu 1 293 -20 184 310 17 0 chr5 124366518 124366576 -78718956 - MIR SINE MIR -74 134 76 774 218 141 105 chr5 124366578 124367078 -78718454 - MLT1H LTR MaLR -4 545 24 2344 149 22 14 chr5 124367078 124367440 -78718092 + MLT1A1 LTR MaLR 1 365 0 774 218 141 105 chr5 124367440 124367463 -78718069 - MLT1H LTR MaLR -525 24 3 182 263 0 53 chr5 124367473 124367530 -78718002 - L2 LINE L2 -652 2662 2609 200 143 24 0 chr5 124368053 124368095 -78717437 + (CA)n Simple_repeat Simple_repeat 2 44 0 2228 99 3 3 chr5 124368601 124368895 -78716637 + AluSp SINE Alu 1 294 -19 1594 152 0 0 chr5 124368940 124369177 -78716355 - AluJo SINE Alu -75 237 1 240 291 21 85 chr5 124370084 124370225 -78715307 + L2 LINE L2 3180 3311 -2 362 207 35 86 chr5 124370300 124370331 -78715201 - MIR SINE MIR -79 183 152 933 258 55 27 chr5 124370331 124370660 -78714872 - MER46C DNA MER2_type 0 338 1 362 207 35 86 chr5 124370660 124370744 -78714788 - MIR SINE MIR -110 152 74 21 0 0 0 chr5 124370852 124370873 -78714659 + AT_rich Low_complexity Low_complexity 1 21 0 1232 162 28 85 chr5 124371087 124371238 -78714294 - MER46A DNA MER2_type -2497 234 76 2204 82 0 49 chr5 124371238 124371543 -78713989 - AluY SINE Alu -21 290 1 1232 162 28 85 chr5 124371543 124371555 -78713977 - MER46A DNA MER2_type -2655 76 65 418 19 0 19 chr5 124371555 124371609 -78713923 - L1PA6 LINE L1 0 6154 6102 1232 162 28 85 chr5 124371609 124371691 -78713841 - MER46A DNA MER2_type -2666 65 2 5716 100 109 124 chr5 124371735 124373323 -78712209 + pTR5 LTR ERV1 743 2438 0 414 0 0 0 chr5 124373909 124373955 -78711577 + (TG)n Simple_repeat Simple_repeat 1 46 0 2241 97 0 17 chr5 124374027 124374327 -78711205 + AluY SINE Alu 1 295 -16 297 0 0 0 chr5 124374601 124374634 -78710898 + (CA)n Simple_repeat Simple_repeat 2 34 0 450 227 175 19 chr5 124375544 124375698 -78709834 + MER5A DNA MER1_type 12 189 0 1439 190 4 11 chr5 124375791 124376054 -78709478 + AluJo SINE Alu 42 302 -10 490 145 58 116 chr5 124376057 124376229 -78709303 - MIR SINE MIR -53 209 48 876 177 11 69 chr5 124376275 124376450 -78709082 + AluJo SINE Alu 125 289 -23 21 36 0 0 chr5 124376453 124376481 -78709051 + AT_rich Low_complexity Low_complexity 1 28 0 588 219 8 16 chr5 124377541 124377669 -78707863 - L2 LINE L2 0 3272 3146 1419 312 92 52 chr5 124377918 124378985 -78706547 - L2 LINE L2 -416 2898 1789 1093 280 123 11 chr5 124379007 124379512 -78706020 + L2 LINE L2 2759 3308 -5 445 281 94 24 chr5 124380132 124380667 -78704865 + L1MC/D LINE L1 4973 5540 -748 10576 140 11 9 chr5 124380788 124383542 -78701990 + L1MA3 LINE L1 3544 6305 0 767 273 97 77 chr5 124383578 124383794 -78701738 + LTR16A LTR ERVL 40 269 -181 1538 214 47 100 chr5 124383794 124384323 -78701209 + MLT1D LTR MaLR 3 503 -2 767 273 97 77 chr5 124384323 124384509 -78701023 + LTR16A LTR ERVL 269 450 0 30 27 0 0 chr5 124384543 124384580 -78700952 + AT_rich Low_complexity Low_complexity 1 37 0 1790 191 55 14 chr5 124384732 124385099 -78700433 + MSTD LTR MaLR 15 396 0 1760 96 92 29 chr5 124385544 124385825 -78699707 - AluSx SINE Alu -13 299 1 38 68 0 0 chr5 124386834 124386907 -78698625 + AT_rich Low_complexity Low_complexity 1 73 0 2268 156 103 5 chr5 124386998 124387388 -78698144 - MSTC LTR MaLR 0 428 1 5952 249 89 40 chr5 124387388 124387687 -78697845 - MSTC-int LTR MaLR 0 1735 1452 2891 3 0 0 chr5 124387687 124387995 -78697537 - AluYa5 SINE Alu -3 308 1 5952 249 89 40 chr5 124387995 124389348 -78696184 - MSTC-int LTR MaLR -283 1452 1 1823 120 65 4 chr5 124389350 124389625 -78695907 - MSTC LTR MaLR -1 427 136 860 230 170 68 chr5 124389765 124390251 -78695281 - MLT1G LTR MaLR 0 555 3 477 297 87 0 chr5 124390354 124390492 -78695040 + MIR SINE MIR 6 155 -107 379 300 17 8 chr5 124390484 124390604 -78694928 - MIR SINE MIR 0 262 142 * 323 181 0 12 chr5 124391424 124391507 -78694025 + (CGG)n Simple_repeat Simple_repeat 2 83 0 25 0 0 0 chr5 124392662 124392687 -78692845 + AT_rich Low_complexity Low_complexity 1 25 0 2060 116 7 0 chr5 124392979 124393271 -78692261 - AluSx SINE Alu -17 295 2 410 320 72 52 chr5 124394089 124394492 -78691040 - MLT1J LTR MaLR -90 421 11 657 325 37 27 chr5 124395140 124395438 -78690094 + L2 LINE L2 3010 3310 -3 3781 95 0 127 chr5 124395542 124396195 -78689337 - L1PA13 LINE L1 -6 6157 5588 22 56 0 0 chr5 124396201 124396237 -78689295 + AT_rich Low_complexity Low_complexity 1 36 0 280 160 96 21 chr5 124396251 124396345 -78689187 - L1ME4a LINE L1 -13 6108 6008 4647 180 40 17 chr5 124396399 124398061 -78687471 + L1MB7 LINE L1 4483 6175 -9 2472 78 0 7 chr5 124398069 124398376 -78687156 - AluSg SINE Alu -5 305 1 27 0 0 0 chr5 124398403 124398430 -78687102 + AT_rich Low_complexity Low_complexity 1 27 0 1345 206 188 93 chr5 124398475 124398755 -78686777 - HsTC2a DNA MER2_type -1160 740 488 1836 157 7 7 chr5 124398755 124399061 -78686471 + AluJb SINE Alu 1 306 -6 1345 206 188 93 chr5 124399061 124399456 -78686076 - HsTC2a DNA MER2_type -1412 488 1 1920 201 56 20 chr5 124400370 124400818 -78684714 - L1ME1 LINE L1 -23 6143 5680 1274 297 64 13 chr5 124401157 124401625 -78683907 + L2 LINE L2 2242 2733 -581 228 328 134 0 chr5 124401630 124401749 -78683783 + MIR SINE MIR 16 150 -58 786 202 138 15 chr5 124401803 124402102 -78683430 - L1MEc LINE L1 -4958 1664 1304 726 305 62 0 chr5 124402152 124402444 -78683088 - L1MEc LINE L1 -6026 1096 787 24 32 0 0 chr5 124402519 124402550 -78682982 + AT_rich Low_complexity Low_complexity 1 31 0 529 265 102 20 chr5 124402642 124402838 -78682694 - MIR SINE MIR -2 260 49 1188 161 37 16 chr5 124402905 124403147 -78682385 - L1MB8 LINE L1 -3 6175 5929 2116 215 27 6 chr5 124403160 124403709 -78681823 - L1ME1 LINE L1 -1020 5126 4566 246 321 109 49 chr5 124405107 124405475 -78680057 + L2 LINE L2 2585 2974 -340 243 264 55 55 chr5 124405801 124405892 -78679640 + MIR SINE MIR 46 136 -72 1731 204 0 0 chr5 124406278 124406587 -78678945 - AluJo SINE Alu -3 309 1 21 0 0 0 chr5 124406722 124406743 -78678789 + AT_rich Low_complexity Low_complexity 1 21 0 197 300 253 47 chr5 124406751 124406901 -78678631 + L2 LINE L2 3091 3271 -1 33720 36 7 2 chr5 124407529 124411847 -78673685 + L1P LINE L1 13 4353 -1793 1969 144 3 3 chr5 124412138 124412436 -78673096 + AluSx SINE Alu 1 298 -14 287 315 70 21 chr5 124412717 124412860 -78672672 + L2 LINE L2 2953 3102 -170 23 33 0 0 chr5 124414245 124414275 -78671257 + AT_rich Low_complexity Low_complexity 1 30 0 850 259 217 19 chr5 124414301 124414796 -78670736 - MLT1H1 LTR MaLR -5 550 1 307 376 33 28 chr5 124414906 124415119 -78670413 - MIR SINE MIR -29 233 20 1253 222 117 16 chr5 124415145 124415591 -78669941 + Charlie1b DNA MER1_type 32 522 -1 417 223 21 11 chr5 124415682 124415776 -78669756 - MIR SINE MIR -62 146 52 1010 224 76 55 chr5 124416022 124416366 -78669166 + MLT1H1 LTR MaLR 202 552 -3 1673 193 91 32 chr5 124416639 124417111 -78668421 + L1MC4 LINE L1 6735 7234 -808 1138 255 136 17 chr5 124417169 124417706 -78667826 + L1MC4 LINE L1 7436 8036 -6 271 184 0 0 chr5 124419696 124419745 -78665787 - MIR SINE MIR -55 207 159 472 239 108 68 chr5 124419774 124419996 -78665536 - MIR SINE MIR -30 232 2 389 36 18 0 chr5 124420327 124420382 -78665150 + (CA)n Simple_repeat Simple_repeat 2 57 0 345 310 65 86 chr5 124420592 124420963 -78664569 + HAL1 LINE L1 1032 1394 -1113 683 196 43 0 chr5 124420981 124421144 -78664388 + MER110A LTR ERV1 1 170 -298 478 211 81 11 chr5 124421245 124421424 -78664108 + MER110A LTR ERV1 317 487 -2 316 271 154 23 chr5 124421478 124421692 -78663840 + HAL1 LINE L1 1472 1713 -794 23 68 0 0 chr5 124421879 124421923 -78663609 + AT_rich Low_complexity Low_complexity 1 44 0 529 77 0 0 chr5 124422023 124422088 -78663444 + AluSq/x SINE Alu 67 131 -181 2134 90 7 0 chr5 124422092 124422369 -78663163 + AluSg SINE Alu 21 299 -11 2410 83 0 0 chr5 124422816 124423116 -78662416 + AluY SINE Alu 1 300 -11 375 325 147 0 chr5 124423344 124423501 -78662031 + MIR3 SINE MIR 18 197 -11 1598 186 7 27 chr5 124423520 124423816 -78661716 + AluJo SINE Alu 1 290 -22 193 241 93 0 chr5 124424563 124424617 -78660915 - L2 LINE L2 -4 3268 3210 1893 182 0 7 chr5 124425090 124425392 -78660140 + AluJo SINE Alu 1 300 -12 1987 152 0 0 chr5 124425684 124425980 -78659552 + AluY SINE Alu 1 296 -15 222 258 113 16 chr5 124426189 124426251 -78659281 - MIR SINE MIR -102 106 39 1173 174 125 3 chr5 124426706 124426993 -78658539 + MER33 DNA MER1_type 1 322 -2 368 232 37 0 chr5 124427107 124427189 -78658343 + MIR SINE MIR 55 139 -69 193 333 49 12 chr5 124427580 124427661 -78657871 + MIR SINE MIR 80 163 -99 402 308 68 0 chr5 124428235 124428368 -78657164 - MIR SINE MIR -119 143 2 424 273 33 60 chr5 124428707 124428890 -78656642 + MIR SINE MIR 10 187 -75 4560 133 17 56 chr5 124431590 124432526 -78653006 + MER4D LTR ERV1 2 660 -4 539 287 135 39 chr5 124433259 124433614 -78651918 + L2 LINE L2 2542 2930 -384 192 296 117 68 chr5 124433708 124433870 -78651662 - L2 LINE L2 -221 3051 2882 235 132 0 0 chr5 124434182 124434220 -78651312 + MLT1I LTR MaLR 1 38 -371 227 340 0 0 chr5 124435018 124435068 -78650464 - L2 LINE L2 -14 3258 3209 541 290 106 0 chr5 124435087 124435304 -78650228 - MIR SINE MIR 0 262 23 247 331 44 25 chr5 124435455 124435615 -78649917 - L2 LINE L2 -227 3086 2924 283 281 111 58 chr5 124436014 124436374 -78649158 + L2 LINE L2 2813 3191 -122 429 230 84 17 chr5 124436385 124436573 -78648959 + MER58A DNA MER1_type 4 224 0 246 274 32 53 chr5 124436594 124436689 -78648843 + L2 LINE L2 3179 3271 -1 234 228 29 52 chr5 124437088 124437182 -78648350 + (TAAA)n Simple_repeat Simple_repeat 3 95 -40 2083 127 0 7 chr5 124437182 124437473 -78648059 - AluSx SINE Alu -23 289 1 234 228 29 52 chr5 124437473 124437514 -78648018 + (TAAA)n Simple_repeat Simple_repeat 95 135 0 311 327 13 51 chr5 124437519 124437675 -78647857 - MIR3 SINE MIR -21 187 38 947 194 21 5 chr5 124437889 124438075 -78647457 - MER5A DNA MER1_type 0 189 1 841 257 113 42 chr5 124438536 124438890 -78646642 + L2 LINE L2 2932 3310 -3 744 178 0 0 chr5 124439267 124439385 -78646147 + AluJb SINE Alu 1 118 -194 285 29 0 0 chr5 124439391 124439425 -78646107 + (CA)n Simple_repeat Simple_repeat 2 35 0 831 269 114 0 chr5 124440939 124441158 -78644374 + MIR SINE MIR 1 244 -18 219 236 0 0 chr5 124441184 124441256 -78644276 + (CCA)n Simple_repeat Simple_repeat 1 72 0 455 228 82 85 chr5 124441345 124441547 -78643985 + L1MC5 LINE L1 7422 7624 -337 866 234 0 12 chr5 124441547 124441714 -78643818 + FAM SINE Alu 1 165 -10 455 228 82 85 chr5 124441714 124441792 -78643740 + L1MC5 LINE L1 7624 7701 -260 497 210 84 0 chr5 124441810 124441929 -78643603 - MER3 DNA MER1_type -7 202 74 248 250 0 13 chr5 124442002 124442078 -78643454 + L1MC5 LINE L1 7750 7824 -137 979 208 75 44 chr5 124442128 124442488 -78643044 + MLT2C1 LTR ERVL 13 383 -14 207 323 135 0 chr5 124442534 124442630 -78642902 + MIR SINE MIR 150 258 -4 377 237 183 23 chr5 124442932 124443194 -78642338 + L1ME4a LINE L1 5737 6040 -81 243 157 39 0 chr5 124443212 124443263 -78642269 - L1ME2 LINE L1 -16 6148 6096 202 298 0 0 chr5 124443317 124443364 -78642168 + (TG)n Simple_repeat Simple_repeat 2 48 0 222 37 0 0 chr5 124443393 124443420 -78642112 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 420 20 0 0 chr5 124443419 124443468 -78642064 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 124443574 124443596 -78641936 + AT_rich Low_complexity Low_complexity 1 22 0 2461 85 7 0 chr5 124443855 124444160 -78641372 - AluSg SINE Alu -3 307 1 658 136 9 0 chr5 124444861 124444971 -78640561 + Charlie1a DNA MER1_type 53 163 -1292 771 245 19 14 chr5 124447645 124447853 -78637679 + MER3 DNA MER1_type 1 209 0 528 209 43 17 chr5 124447861 124447976 -78637556 - MER5B DNA MER1_type 0 178 61 4089 132 28 14 chr5 124447984 124448690 -78636842 - L1MA4A LINE L1 -7 6296 5581 4327 181 22 33 chr5 124448707 124449718 -78635814 + L1 LINE L1 3072 4071 -2075 1661 184 84 16 chr5 124449705 124450156 -78635376 - L1 LINE L1 -2927 4281 3800 * 773 133 84 0 chr5 124450190 124450356 -78635176 - L1 LINE L1 -3957 3252 3073 3684 253 48 42 chr5 124450379 124451602 -78633930 - L1 LINE L1 -5013 2196 1087 180 163 245 0 chr5 124451601 124451650 -78633882 + MER5B DNA MER1_type 115 175 -3 * 587 243 195 9 chr5 124451655 124451865 -78633667 + MIR SINE MIR 14 262 0 486 266 95 18 chr5 124453493 124453662 -78631870 + ERVL LTR ERVL 2008 2189 -3575 2148 315 64 12 chr5 124453769 124455866 -78629666 + ERVL LTR ERVL 2134 4356 -1298 2645 256 52 6 chr5 124456154 124456830 -78628702 + L1ME3 LINE L1 5453 6159 -3 2596 47 0 0 chr5 124457180 124457478 -78628054 - AluY SINE Alu -13 298 1 250 135 0 0 chr5 124457704 124457741 -78627791 + AluSp SINE Alu 137 173 -130 913 105 24 0 chr5 124457782 124457906 -78627626 + FLAM_C SINE Alu 1 127 -16 6312 70 48 6 chr5 124457919 124459177 -78626355 + SVA Other Other 35 1384 -2 234 0 0 0 chr5 124459349 124459375 -78626157 + (TAA)n Simple_repeat Simple_repeat 2 27 0 906 173 13 0 chr5 124459380 124459536 -78625996 + AluJb SINE Alu 138 295 -17 818 194 0 41 chr5 124459737 124459907 -78625625 - FRAM SINE Alu -14 162 1 2211 115 0 0 chr5 124459920 124460216 -78625316 - AluSx SINE Alu -14 298 3 28 48 0 0 chr5 124460525 124460567 -78624965 + AT_rich Low_complexity Low_complexity 1 42 0 462 126 168 21 chr5 124460980 124461075 -78624457 + FLAM_C SINE Alu 30 138 -5 264 59 0 0 chr5 124461647 124461681 -78623851 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 2047 111 7 0 chr5 124461684 124461963 -78623569 - AluSx SINE Alu -31 281 1 400 280 10 10 chr5 124462659 124462759 -78622773 + L2 LINE L2 3173 3272 0 895 146 35 7 chr5 124462840 124462984 -78622548 - FAM SINE Alu -22 163 16 1646 215 73 3 chr5 124463115 124463497 -78622035 - L1MC3 LINE L1 0 7785 7377 183 80 0 0 chr5 124463933 124463958 -78621574 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 1159 273 146 16 chr5 124463959 124464410 -78621122 - LTR33 LTR ERVL -1 520 11 1698 172 0 40 chr5 124467667 124467963 -78617569 - AluJb SINE Alu -20 292 9 1546 103 0 95 chr5 124468267 124468520 -78617012 + AluSx SINE Alu 1 229 -83 200 174 28 156 chr5 124469541 124469587 -78615945 - L2 LINE L2 -97 3216 3190 726 216 0 0 chr5 124469587 124469703 -78615829 + FLAM_A SINE Alu 4 119 -14 200 174 28 156 chr5 124469703 124469765 -78615767 - L2 LINE L2 -123 3190 3122 2026 132 76 25 chr5 124469765 124470122 -78615410 - THE1C LTR MaLR 0 375 1 729 330 152 24 chr5 124470196 124470611 -78614921 - L2 LINE L2 -338 2976 2509 868 205 200 0 chr5 124471186 124471401 -78614131 - MIR SINE MIR -3 259 2 409 297 38 81 chr5 124472648 124472833 -78612699 + MER5B DNA MER1_type 1 177 -1 276 30 0 0 chr5 124473000 124473033 -78612499 + (CA)n Simple_repeat Simple_repeat 1 33 0 1106 155 42 68 chr5 124473050 124473315 -78612217 + L1MD1 LINE L1 984 1241 -5299 4657 169 47 42 chr5 124473666 124474598 -78610934 + L1MD1 LINE L1 5492 6436 -200 1676 187 0 35 chr5 124474598 124474908 -78610624 + AluJb SINE Alu 1 299 -13 4657 169 47 42 chr5 124474908 124475109 -78610423 + L1MD1 LINE L1 6436 6635 -1 312 250 83 0 chr5 124475797 124475893 -78609639 - L3b LINE CR1 -98 1485 1382 393 22 0 0 chr5 124478460 124478506 -78607026 + (CA)n Simple_repeat Simple_repeat 1 46 0 487 198 157 105 chr5 124478641 124478954 -78606578 - MER46C DNA MER2_type -9 329 1 271 216 122 14 chr5 124479076 124479150 -78606382 - MIR SINE MIR -82 126 45 367 278 9 9 chr5 124479182 124479297 -78606235 - LTR67 LTR ERVL -12 545 431 241 217 14 43 chr5 124479781 124479850 -78605682 + L1M4 LINE L1 3914 3980 -2166 250 350 92 6 chr5 124480878 124481238 -78604294 + L1M4 LINE L1 4233 4623 -1523 1617 197 69 3 chr5 124481607 124481957 -78603575 + L1MB8 LINE L1 5806 6178 0 404 187 32 8 chr5 124482358 124482481 -78603051 + GA-rich Low_complexity Low_complexity 4 129 0 290 269 113 31 chr5 124482926 124483086 -78602446 - LTR33 LTR ERVL 0 521 349 180 0 0 0 chr5 124483184 124483204 -78602328 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 124483651 124483672 -78601860 + AT_rich Low_complexity Low_complexity 1 21 0 2064 86 0 11 chr5 124485020 124485289 -78600243 + AluY SINE Alu 1 266 -45 301 265 117 37 chr5 124486058 124486220 -78599312 + MER5B DNA MER1_type 4 178 0 307 286 15 87 chr5 124486920 124486971 -78598561 - MIR SINE MIR -13 249 196 2626 153 43 39 chr5 124486971 124487479 -78598053 + LTR54 LTR ERV1 1 510 0 307 286 15 87 chr5 124487479 124487623 -78597909 - MIR SINE MIR -66 196 68 40076 76 5 11 chr5 124487745 124493933 -78591599 + L1PA6 LINE L1 1 6150 -4 1153 247 229 18 chr5 124494110 124494560 -78590972 - MLT1F1 LTR MaLR -12 555 11 1618 180 20 10 chr5 124494618 124494912 -78590620 - L1PB4 LINE L1 -3 6153 5857 513 260 81 12 chr5 124495415 124495588 -78589944 - MIR SINE MIR -70 192 8 298 296 11 0 chr5 124495589 124495677 -78589855 + L1ME LINE L1 5552 5640 -481 254 250 47 16 chr5 124495794 124495858 -78589674 - L3 LINE CR1 -3 1574 1509 2051 117 10 10 chr5 124496058 124496366 -78589166 - AluSx SINE Alu -4 308 1 494 274 200 36 chr5 124496805 124497195 -78588337 + L2 LINE L2 2817 3270 -2 2257 166 53 22 chr5 124497635 124497683 -78587849 - MSTA LTR MaLR 0 428 383 2041 149 43 30 chr5 124497683 124498053 -78587479 - THE1C LTR MaLR 0 375 1 2257 166 53 22 chr5 124498053 124498419 -78587113 - MSTA LTR MaLR -45 383 1 2070 114 225 6 chr5 124499709 124500060 -78585472 + MSTA LTR MaLR 1 428 0 399 100 67 0 chr5 124500184 124500244 -78585288 + U6 snRNA snRNA 1 64 -43 1644 155 42 7 chr5 124501159 124501443 -78584089 - AluJo SINE Alu -18 294 1 596 224 112 22 chr5 124501895 124502074 -78583458 - MIR SINE MIR -5 257 63 282 330 65 40 chr5 124502115 124502315 -78583217 - MIR SINE MIR -46 216 12 1130 227 148 45 chr5 124502669 124503144 -78582388 + MLT1F1 LTR MaLR 5 559 -8 618 258 182 5 chr5 124503151 124503349 -78582183 + MER46C DNA MER2_type 93 325 -13 279 318 0 0 chr5 124504511 124504596 -78580936 + MIR3 SINE MIR 114 198 -10 453 263 18 9 chr5 124505506 124505620 -78579912 - L2 LINE L2 -2 3311 3197 3787 174 80 64 chr5 124505722 124506252 -78579280 + L1MB8 LINE L1 4779 5299 -879 630 155 147 0 chr5 124506252 124506368 -78579164 + FLAM_C SINE Alu 1 133 0 3787 174 80 64 chr5 124506368 124507187 -78578345 + L1MB8 LINE L1 5299 6178 0 209 277 99 20 chr5 124507299 124507400 -78578132 - L2 LINE L2 0 3313 3205 266 317 69 21 chr5 124507473 124507618 -78577914 - MIR SINE MIR -95 167 16 485 265 191 39 chr5 124508307 124508768 -78576764 + MLT1L LTR MaLR 83 613 -2 439 246 126 42 chr5 124509167 124509358 -78576174 - MIR SINE MIR -2 260 54 360 331 89 60 chr5 124511213 124511482 -78574050 - L2 LINE L2 -109 3163 2887 483 271 118 35 chr5 124511671 124511815 -78573717 - MIR SINE MIR -94 168 13 755 236 25 0 chr5 124512044 124512205 -78573327 + MER20 DNA MER1_type 2 166 -53 276 169 153 0 chr5 124512951 124513010 -78572522 + L1MB8 LINE L1 6110 6177 -1 208 214 21 21 chr5 124518917 124519015 -78566517 + T-rich Low_complexity Low_complexity 2 145 0 1691 205 43 51 chr5 124519254 124519410 -78566122 - L1ME1 LINE L1 -5 6161 6005 2089 95 67 0 chr5 124519410 124519695 -78565837 - AluSg SINE Alu -6 304 1 1691 205 43 51 chr5 124519695 124520007 -78565525 - L1ME1 LINE L1 -161 6005 5697 849 195 16 11 chr5 124520012 124520197 -78565335 - MLT1A2 LTR MaLR 0 374 189 240 274 26 6 chr5 124520213 124520307 -78565225 + GA-rich Low_complexity Low_complexity 2 160 0 769 176 85 9 chr5 124520310 124520485 -78565047 - MLT1B LTR MaLR -194 180 3 1140 184 40 59 chr5 124520555 124520714 -78564818 + L1ME LINE L1 5352 5505 -661 2366 91 0 0 chr5 124520714 124521012 -78564520 - AluSg SINE Alu -12 298 1 1140 184 40 59 chr5 124521012 124521124 -78564408 + L1ME LINE L1 5505 5618 -548 921 168 31 0 chr5 124521698 124521859 -78563673 - MER5A DNA MER1_type -23 166 1 443 282 93 19 chr5 124522663 124522878 -78562654 - L1ME1 LINE L1 -403 5718 5492 869 188 0 0 chr5 124523021 124523165 -78562367 + AluSg/x SINE Alu 145 288 -22 18284 38 1 0 chr5 124523302 124526160 -78559372 - L1PA4 LINE L1 0 6155 3293 349 293 0 0 chr5 124526369 124526451 -78559081 + MIR3 SINE MIR 76 157 -51 2668 143 16 32 chr5 124526851 124527290 -78558242 - MSTB1 LTR MaLR 0 432 1 300 282 56 7 chr5 124527305 124527447 -78558085 + L1ME4a LINE L1 5970 6118 -3 562 318 178 4 chr5 124527715 124527979 -78557553 + L2 LINE L2 2963 3272 0 16599 94 21 5 chr5 124528458 124529731 -78555801 - Charlie3 DNA MER1_type 0 2706 1454 2398 131 46 14 chr5 124529731 124530082 -78555450 + THE1B LTR MaLR 3 364 0 16599 94 21 5 chr5 124530082 124531386 -78554146 - Charlie3 DNA MER1_type -1252 1454 46 596 213 37 24 chr5 124531920 124532084 -78553448 - MER104 DNA Tc2 0 180 15 655 221 226 20 chr5 124532578 124532773 -78552759 + MIR SINE MIR 2 236 -26 180 77 0 0 chr5 124532792 124532818 -78552714 + (ATG)n Simple_repeat Simple_repeat 1 26 0 213 247 315 0 chr5 124533224 124533313 -78552219 - L2 LINE L2 -10 3303 3187 30560 122 12 54 chr5 124533378 124539816 -78545716 + L1PA8 LINE L1 14 6171 -1 419 313 35 0 chr5 124539909 124540024 -78545508 + L2 LINE L2 3129 3247 -25 712 234 196 75 chr5 124540242 124540614 -78544918 + MLT1J LTR MaLR 61 477 -34 6276 58 38 17 chr5 124541360 124542124 -78543408 + LTR17 LTR ERV1 1 780 0 39818 55 13 1 chr5 124542124 124546954 -78538578 + HERV17 LTR ERV1 1 4890 -3736 245 284 0 68 chr5 124549445 124549519 -78536013 + L2 LINE L2 3241 3309 -4 554 197 127 25 chr5 124550714 124550867 -78534665 + MIR SINE MIR 5 164 -65 1307 281 109 2 chr5 124551135 124551604 -78533928 - LTR33 LTR ERVL 0 521 3 195 290 32 0 chr5 124552880 124552942 -78532590 + MIR SINE MIR 173 236 -26 1953 204 19 74 chr5 124552948 124553409 -78532123 + MER45B DNA AcHobo 1 436 -604 3240 183 31 17 chr5 124553411 124553480 -78532052 + MER45B DNA AcHobo 393 460 -1121 2251 120 0 0 chr5 124553480 124553779 -78531753 - AluSg SINE Alu -11 299 1 3240 183 31 17 chr5 124553779 124554348 -78531184 + MER45B DNA AcHobo 460 1040 0 1810 130 33 30 chr5 124554769 124555068 -78530464 - AluSx SINE Alu -12 300 1 1431 156 3 89 chr5 124558374 124558689 -78526843 + AluJo SINE Alu 3 290 -22 1698 136 12 16 chr5 124558705 124558956 -78526576 - AluJo SINE Alu -30 282 33 416 310 62 0 chr5 124560271 124560400 -78525132 + MLT1J LTR MaLR 92 228 -283 2283 108 0 13 chr5 124560875 124561189 -78524343 - AluSg SINE Alu 0 310 1 317 271 135 0 chr5 124561553 124561649 -78523883 + MER91B DNA MER1_type 77 185 -5 324 0 0 0 chr5 124561852 124561888 -78523644 + (CA)n Simple_repeat Simple_repeat 2 37 0 824 303 55 27 chr5 124562178 124562508 -78523024 + MER102b DNA MER1_type 3 341 0 222 37 0 0 chr5 124562592 124562619 -78522913 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 203 122 24 24 chr5 124563919 124563960 -78521572 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 236 208 42 0 chr5 124564031 124564079 -78521453 + MIR SINE MIR 213 262 0 277 317 14 7 chr5 124564099 124564241 -78521291 + L1M LINE L1 5265 5407 -757 245 286 95 0 chr5 124565014 124565098 -78520434 + L2 LINE L2 3210 3301 -12 287 304 95 36 chr5 124565725 124565893 -78519639 + L2 LINE L2 3085 3262 -10 243 270 230 7 chr5 124566117 124566269 -78519263 - MIR SINE MIR -1 261 76 1657 151 41 163 chr5 124566280 124566764 -78518768 + MSTB LTR MaLR 2 426 0 22 56 0 0 chr5 124566817 124566853 -78518679 + AT_rich Low_complexity Low_complexity 1 36 0 549 55 0 27 chr5 124566906 124566979 -78518553 + L1PA5 LINE L1 6078 6148 -6 1624 182 29 51 chr5 124567228 124567309 -78518223 - MER2 DNA MER2_type -1 343 262 2221 129 3 0 chr5 124567309 124567620 -78517912 + AluSx SINE Alu 1 312 0 1624 182 29 51 chr5 124567620 124567889 -78517643 - MER2 DNA MER2_type -82 262 1 196 296 41 71 chr5 124568820 124568918 -78516614 - L2 LINE L2 -2779 535 441 38975 93 4 5 chr5 124568986 124575166 -78510366 + L1PA8 LINE L1 1 6171 -1 419 313 35 0 chr5 124575259 124575374 -78510158 + L2 LINE L2 3129 3247 -25 712 234 196 75 chr5 124575592 124575964 -78509568 + MLT1J LTR MaLR 61 477 -34 6401 56 34 17 chr5 124576710 124577477 -78508055 + LTR17 LTR ERV1 1 780 0 49590 52 12 1 chr5 124577477 124583429 -78502103 + HERV17 LTR ERV1 1 6017 -2609 2489 51 0 0 chr5 124583453 124583745 -78501787 + HERV17 LTR ERV1 8335 8626 0 6347 76 21 10 chr5 124583745 124584517 -78501015 + LTR17 LTR ERV1 1 780 0 216 296 0 0 chr5 124585730 124585784 -78499748 + CT-rich Low_complexity Low_complexity 3 56 0 2390 69 0 0 chr5 124586302 124586590 -78498942 - AluY SINE Alu -23 288 1 339 194 15 0 chr5 124586669 124586736 -78498796 + FLAM_A SINE Alu 65 132 -1 449 264 48 0 chr5 124587084 124587209 -78498323 + MER20 DNA MER1_type 31 161 -58 34 89 0 0 chr5 124587377 124587467 -78498065 + AT_rich Low_complexity Low_complexity 1 90 0 3442 144 20 9 chr5 124587471 124588012 -78497520 - L1MC1 LINE L1 -6 6327 5781 21 57 0 0 chr5 124588098 124588133 -78497399 + AT_rich Low_complexity Low_complexity 1 35 0 2047 139 0 0 chr5 124588915 124589202 -78496330 + AluSx SINE Alu 1 287 -25 885 191 19 0 chr5 124589415 124589572 -78495960 + AluSg/x SINE Alu 135 294 -16 222 241 0 121 chr5 124589737 124589820 -78495712 + L2 LINE L2 3195 3267 -5 186 208 0 0 chr5 124589821 124589869 -78495663 + GA-rich Low_complexity Low_complexity 1 48 0 2389 242 42 51 chr5 124589947 124592344 -78493188 + L1MB5 LINE L1 66 2690 -3873 1123 237 8 8 chr5 124592352 124592614 -78492918 + L1MB5 LINE L1 5752 6013 -403 1978 178 13 36 chr5 124592691 124592741 -78492791 + L1MB5 LINE L1 6019 6069 -341 2241 112 0 0 chr5 124592741 124593037 -78492495 + AluSg1 SINE Alu 1 296 -13 1978 178 13 36 chr5 124593037 124593379 -78492153 + L1MB5 LINE L1 6069 6402 -8 43246 56 3 1 chr5 124593763 124599901 -78485631 - L1PA5 LINE L1 -2 6152 1 196 296 41 71 chr5 124599969 124600067 -78485465 + L2 LINE L2 441 535 -2779 1624 182 29 51 chr5 124600998 124601267 -78484265 + MER2 DNA MER2_type 1 262 -82 2221 129 3 0 chr5 124601267 124601578 -78483954 - AluSx SINE Alu 0 312 1 1624 182 29 51 chr5 124601578 124601659 -78483873 + MER2 DNA MER2_type 262 343 -1 549 55 0 27 chr5 124601908 124601981 -78483551 - L1PA5 LINE L1 -6 6148 6078 22 56 0 0 chr5 124602034 124602070 -78483462 + AT_rich Low_complexity Low_complexity 1 36 0 1657 151 41 163 chr5 124602123 124602607 -78482925 - MSTB LTR MaLR 0 426 2 216 283 125 8 chr5 124602650 124602770 -78482762 + MIR SINE MIR 128 261 -1 287 304 95 36 chr5 124602994 124603162 -78482370 - L2 LINE L2 -10 3262 3085 245 286 95 0 chr5 124603789 124603873 -78481659 - L2 LINE L2 -12 3301 3210 393 279 148 35 chr5 124604559 124604788 -78480744 - L1M4 LINE L1 -655 5519 5265 237 208 42 0 chr5 124604808 124604856 -78480676 - MIR SINE MIR 0 262 213 203 122 24 24 chr5 124604927 124604968 -78480564 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 222 37 0 0 chr5 124606268 124606295 -78479237 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 703 303 55 27 chr5 124606379 124606709 -78478823 - MER102b DNA MER1_type 0 341 3 306 0 0 0 chr5 124606999 124607033 -78478499 + (TG)n Simple_repeat Simple_repeat 2 35 0 318 271 135 0 chr5 124607236 124607332 -78478200 - MER91B DNA MER1_type -5 185 77 2287 108 0 13 chr5 124607696 124608010 -78477522 + AluSg SINE Alu 1 310 0 371 310 62 0 chr5 124608485 124608614 -78476918 - MLT1J LTR MaLR -283 228 92 1706 136 12 16 chr5 124609929 124610180 -78475352 + AluJo SINE Alu 33 282 -30 1455 156 3 89 chr5 124610196 124610511 -78475021 - AluJo SINE Alu -22 290 3 1823 130 33 30 chr5 124613817 124614116 -78471416 + AluSx SINE Alu 1 300 -12 4375 189 23 79 chr5 124614537 124615106 -78470426 - MER45B DNA AcHobo -541 1040 561 2258 120 0 0 chr5 124615106 124615405 -78470127 + AluSg SINE Alu 1 299 -11 4375 189 23 79 chr5 124615405 124615937 -78469595 - MER45B DNA AcHobo -1020 561 1 204 290 32 0 chr5 124615943 124616005 -78469527 - MIR SINE MIR -26 236 173 1152 275 112 2 chr5 124617284 124617749 -78467783 + LTR33 LTR ERVL 6 521 0 556 197 127 25 chr5 124618017 124618170 -78467362 - MIR SINE MIR -65 143 5 236 297 0 68 chr5 124619365 124619439 -78466093 - L2 LINE L2 -4 3309 3241 1318 199 37 8 chr5 124619602 124619843 -78465689 - AluJo SINE Alu -27 285 38 3805 195 65 62 chr5 124619848 124619879 -78465653 - L1MD1 LINE L1 0 6242 6213 1831 154 91 0 chr5 124619879 124620197 -78465335 - MER7A DNA MER2_type -1 345 1 3805 195 65 62 chr5 124620197 124620929 -78464603 - L1MD1 LINE L1 -29 6213 5485 1746 131 12 49 chr5 124620929 124621257 -78464275 - L1MC1 LINE L1 -2 6331 6016 747 129 24 8 chr5 124621257 124621374 -78464158 + L1MC1 LINE L1 6199 6324 -9 2146 125 0 3 chr5 124621375 124621672 -78463860 + AluSx SINE Alu 1 296 -16 3805 195 65 62 chr5 124621672 124622634 -78462898 - L1MD1 LINE L1 -756 5486 4509 392 313 132 0 chr5 124622738 124622920 -78462612 - L1MDa LINE L1 -5891 649 444 268 342 9 18 chr5 124622921 124623035 -78462497 - MIR SINE MIR -149 113 1 2254 106 0 7 chr5 124623218 124623519 -78462013 - AluSq SINE Alu -14 299 1 318 138 0 17 chr5 124623572 124623630 -78461902 - MLT2B1 LTR ERVL 0 520 464 1660 207 56 16 chr5 124623797 124624241 -78461291 + MLT1C LTR MaLR 6 467 0 249 352 0 0 chr5 124624706 124624777 -78460755 + L2 LINE L2 3242 3312 -1 273 347 32 0 chr5 124624890 124624985 -78460547 - MIR3 SINE MIR 0 208 111 1964 153 0 0 chr5 124627602 124627884 -78457648 - AluSx SINE Alu -30 282 1 261 298 24 0 chr5 124629153 124629237 -78456295 - MLT1L LTR MaLR -207 408 323 982 323 55 9 chr5 124629261 124629701 -78455831 + L1MEc LINE L1 70 529 -5867 978 224 49 63 chr5 124629770 124629969 -78455563 + L1MEc LINE L1 2407 2600 -3615 2322 92 0 3 chr5 124629969 124630272 -78455260 + AluSq SINE Alu 1 302 -11 978 224 49 63 chr5 124630272 124630421 -78455111 + L1MEc LINE L1 2600 2750 -3465 21 71 0 0 chr5 124630856 124630898 -78454634 + AT_rich Low_complexity Low_complexity 1 42 0 252 0 0 0 chr5 124630967 124630995 -78454537 + (A)n Simple_repeat Simple_repeat 1 28 0 212 203 31 0 chr5 124631071 124631135 -78454397 + CT-rich Low_complexity Low_complexity 2 67 0 317 212 68 25 chr5 124631226 124631344 -78454188 + MLT1L LTR MaLR 142 264 -351 467 239 14 7 chr5 124631422 124631560 -78453972 - L1M4 LINE L1 -3284 2862 2724 49 66 0 0 chr5 124631996 124632087 -78453445 + AT_rich Low_complexity Low_complexity 1 91 0 1749 195 0 6 chr5 124632130 124632443 -78453089 + AluJo SINE Alu 1 311 -1 1863 232 74 19 chr5 124633112 124633774 -78451758 - L1ME2 LINE L1 0 6178 5492 827 256 43 4 chr5 124633783 124634013 -78451519 - MLT1D LTR MaLR 0 505 267 1264 181 27 9 chr5 124634087 124634447 -78451085 + MER61B LTR ERV1 1 396 -29 259 221 52 39 chr5 124634548 124634625 -78450907 - MLT1D LTR MaLR -427 78 1 1082 173 17 6 chr5 124634625 124634954 -78450578 - L1ME2 LINE L1 -755 5391 5153 302 340 70 0 chr5 124634982 124635082 -78450450 + L2 LINE L2 3150 3256 -16 1644 182 51 11 chr5 124635205 124635578 -78449954 - L1MB7 LINE L1 -16 6168 5781 1664 146 10 23 chr5 124635578 124635799 -78449733 - Tigger3(Golem) DNA MER2_type -1 3027 2810 2424 124 55 18 chr5 124635799 124636233 -78449299 + LTR7 LTR ERV1 1 450 0 1664 146 10 23 chr5 124636233 124636313 -78449219 - Tigger3(Golem) DNA MER2_type -218 2810 2730 28587 116 27 55 chr5 124636325 124642647 -78442885 + L1PA8 LINE L1 12 6149 -23 3773 135 65 10 chr5 124642647 124643373 -78442159 - Tigger3(Golem) DNA MER2_type -252 2777 2012 1240 209 8 12 chr5 124643374 124643627 -78441905 - AluJb SINE Alu -60 252 1 305 137 0 0 chr5 124643643 124643694 -78441838 - Tigger3(Golem) DNA MER2_type -1058 1971 1921 * 484 226 10 0 chr5 124643692 124643794 -78441738 - Tigger3(Golem) DNA MER2_type -2925 104 2 2246 163 10 0 chr5 124643795 124644206 -78441326 - L1MB7 LINE L1 -401 5783 5369 * 4507 201 38 62 chr5 124644205 124644252 -78441280 - L1M4 LINE L1 -5353 1189 1142 2832 146 99 10 chr5 124644252 124644835 -78440697 + LTR24C LTR ERV1 1 635 0 4507 201 38 62 chr5 124644835 124646002 -78439530 - L1M4 LINE L1 -5400 1142 4 213 264 19 0 chr5 124646075 124646128 -78439404 + L2 LINE L2 2989 3042 -230 1748 236 38 70 chr5 124646904 124647536 -78437996 - LTR9 LTR ERV1 0 612 1 380 241 126 10 chr5 124647925 124648129 -78437403 - L1M4 LINE L1 -620 5554 5323 2407 142 0 66 chr5 124648130 124648315 -78437217 - L1PB1 LINE L1 -3 6864 6668 2509 75 0 0 chr5 124648315 124648622 -78436910 - AluY SINE Alu -4 307 1 2407 142 0 66 chr5 124648622 124648907 -78436625 - L1PB1 LINE L1 -199 6668 6425 716 65 0 0 chr5 124648923 124649016 -78436516 + AluY SINE Alu 212 304 -7 347 179 0 0 chr5 124649016 124649094 -78436438 + L1PB1 LINE L1 5964 6041 -110 * 13374 198 28 18 chr5 124649084 124649520 -78436012 - L1PB1 LINE L1 -438 6429 5999 9802 50 4 0 chr5 124649520 124651504 -78434028 - L1PA5 LINE L1 -11 6143 4145 13374 198 28 18 chr5 124651504 124656179 -78429353 - L1PB1 LINE L1 -868 5999 1093 2102 196 23 5 chr5 124656182 124656610 -78428922 - L1PB1 LINE L1 -5817 1046 611 723 291 56 14 chr5 124656640 124656925 -78428607 - L1PB1 LINE L1 -6313 550 254 1629 203 113 28 chr5 124656944 124657367 -78428165 + LTR2B LTR ERV1 32 490 0 45341 196 3 7 chr5 124657367 124665214 -78420318 + HERVE LTR ERV1 1 7812 -1 1671 196 116 31 chr5 124665233 124665656 -78419876 + LTR2B LTR ERV1 32 490 0 717 244 53 29 chr5 124665656 124665902 -78419630 - L1PB1 LINE L1 -6606 257 6 562 201 36 7 chr5 124666069 124666208 -78419324 - L1MD3 LINE L1 0 7995 7853 24 0 0 0 chr5 124666942 124666966 -78418566 + AT_rich Low_complexity Low_complexity 1 24 0 1057 112 77 7 chr5 124667399 124667599 -78417933 + MLT2A2 LTR ERVL 1 208 -236 250 0 100 0 chr5 124668207 124668247 -78417285 + T-rich Low_complexity Low_complexity 3 46 0 315 239 0 54 chr5 124668813 124668905 -78416627 + L2 LINE L2 3186 3272 0 874 273 38 38 chr5 124669418 124669733 -78415799 - MER102a DNA MER1_type -15 315 1 236 159 45 0 chr5 124670710 124670754 -78414778 + L2 LINE L2 3258 3303 -10 571 228 189 5 chr5 124670936 124671142 -78414390 + MIR SINE MIR 15 258 -4 482 265 43 0 chr5 124671364 124671481 -78414051 + MIR SINE MIR 30 151 -111 545 215 8 33 chr5 124671494 124671615 -78413917 + ORSL DNA AcHobo 1 118 -157 284 158 18 18 chr5 124671627 124671684 -78413848 + MSTA LTR MaLR 13 69 -388 31399 110 9 21 chr5 124671685 124678120 -78407412 + L1PA7 LINE L1 20 6465 -4 545 198 0 10 chr5 124678144 124678240 -78407292 + MSTA LTR MaLR 42 136 -292 1097 203 5 0 chr5 124678240 124678437 -78407095 - AluJo SINE Alu -63 249 52 421 252 86 46 chr5 124679310 124679461 -78406071 - MIR3 SINE MIR -21 187 31 21 0 0 0 chr5 124679653 124679674 -78405858 + AT_rich Low_complexity Low_complexity 1 21 0 2032 272 28 22 chr5 124680520 124681009 -78404523 + ERVL LTR ERVL 4586 5081 -683 5584 142 12 29 chr5 124681009 124681948 -78403584 + MER49 LTR ERV1 1 923 0 2032 272 28 22 chr5 124681948 124682102 -78403430 + ERVL LTR ERVL 5081 5233 -531 893 230 149 53 chr5 124682172 124682567 -78402965 + LTR50 LTR ERVL 350 782 -13 438 281 79 18 chr5 124682570 124682734 -78402798 - MIR SINE MIR -76 186 13 382 267 0 0 chr5 124683382 124683472 -78402060 + L2 LINE L2 3183 3272 0 262 304 152 0 chr5 124683473 124683611 -78401921 + L3 LINE CR1 1365 1523 -54 826 303 90 12 chr5 124684932 124685417 -78400115 - L2 LINE L2 -50 3263 2741 387 229 92 96 chr5 124736142 124736382 -78349150 - MSTD LTR MaLR -157 239 1 1609 167 43 0 chr5 124736476 124736757 -78348775 - AluJb SINE Alu -19 293 1 1547 134 144 17 chr5 124736820 124737012 -78348520 + MER44D DNA MER2_type 3 169 -2322 1963 137 46 38 chr5 124737012 124737384 -78348148 - THE1C LTR MaLR 0 375 1 1547 134 144 17 chr5 124737384 124737490 -78348042 + MER44D DNA MER2_type 169 609 0 228 100 0 0 chr5 124737493 124737523 -78348009 + LTR67 LTR ERVL 110 139 -418 * 287 251 43 6 chr5 124737497 124737592 -78347940 + MLT1L LTR MaLR 110 267 -305 * 345 159 111 0 chr5 124737591 124737654 -78347878 + FRAM/FAM SINE Alu 17 86 -89 585 157 0 0 chr5 124738072 124738155 -78347377 + AluJ/FLAM SINE Alu 4 86 -226 2173 127 7 0 chr5 124738563 124738870 -78346662 + AluSq SINE Alu 1 309 -4 310 277 0 0 chr5 124738902 124738985 -78346547 - MER5A DNA MER1_type -98 91 9 483 231 202 0 chr5 124738990 124739163 -78346369 + HAL1 LINE L1 2094 2301 -206 809 205 178 62 chr5 124739319 124739422 -78346110 + AluJb SINE Alu 2 92 -210 2045 101 0 27 chr5 124739422 124739720 -78345812 - AluSx SINE Alu -22 290 1 809 205 178 62 chr5 124739720 124739874 -78345658 + AluJb SINE Alu 92 289 -13 219 36 0 0 chr5 124739926 124739954 -78345578 + (A)n Simple_repeat Simple_repeat 1 28 0 319 147 29 44 chr5 124740024 124740092 -78345440 - MSTD LTR MaLR -2 394 328 1544 141 4 12 chr5 124740092 124740340 -78345192 + AluSg SINE Alu 45 290 -20 583 335 107 42 chr5 124740396 124741079 -78344453 - L2 LINE L2 -1558 1756 1030 765 155 70 0 chr5 124741137 124741279 -78344253 + AluSx SINE Alu 61 212 -100 222 235 86 25 chr5 124741657 124741738 -78343794 + MIR SINE MIR 37 122 -140 6824 127 12 113 chr5 124741964 124743270 -78342262 - Tigger1 DNA MER2_type -1 2417 1309 1718 153 14 10 chr5 124743270 124743558 -78341974 + AluJo SINE Alu 1 289 -23 6824 127 12 113 chr5 124743558 124743884 -78341648 - Tigger1 DNA MER2_type -1109 1309 951 5960 119 43 63 chr5 124743894 124744748 -78340784 - Tigger1 DNA MER2_type -1352 1066 237 2051 87 25 4 chr5 124744748 124745024 -78340508 - AluSc SINE Alu -27 282 1 5960 119 43 63 chr5 124745024 124745257 -78340275 - Tigger1 DNA MER2_type -2181 237 1 1892 129 7 4 chr5 124745303 124745583 -78339949 - AluSg SINE Alu -13 297 17 22 0 0 0 chr5 124747223 124747245 -78338287 + AT_rich Low_complexity Low_complexity 1 22 0 201 274 0 41 chr5 124747783 124747856 -78337676 + CT-rich Low_complexity Low_complexity 25 94 0 209 227 0 0 chr5 124748155 124748199 -78337333 + A-rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 124748258 124748279 -78337253 + AT_rich Low_complexity Low_complexity 1 21 0 1929 121 40 0 chr5 124749242 124749514 -78336018 - AluSx SINE Alu -25 287 5 316 343 71 34 chr5 124749599 124749896 -78335636 + L2 LINE L2 2295 2602 -712 317 313 141 26 chr5 124750240 124750432 -78335100 + MLT1K LTR MaLR 56 269 -319 258 331 32 45 chr5 124751349 124751506 -78334026 - MER5A DNA MER1_type -22 167 13 919 226 80 26 chr5 124751904 124752130 -78333402 - MSTD LTR MaLR 0 396 159 1983 196 56 13 chr5 124752554 124752932 -78332600 - MSTD LTR MaLR 0 396 3 2706 165 101 23 chr5 124753609 124754281 -78331251 + LTR28 LTR ERV1 1 635 -1 529 294 6 33 chr5 124754865 124755045 -78330487 - MIR3 SINE MIR -3 205 31 356 256 204 29 chr5 124756332 124756504 -78329028 - L2 LINE L2 0 3313 3112 180 359 0 22 chr5 124756544 124756636 -78328896 + MIR SINE MIR 132 221 -41 351 267 99 45 chr5 124756957 124757178 -78328354 + L2 LINE L2 3079 3270 -2 187 43 0 0 chr5 124757632 124757655 -78327877 + (TTTTG)n Simple_repeat Simple_repeat 2 175 0 1878 157 0 11 chr5 124757655 124757943 -78327589 - AluJo SINE Alu -1 307 1 1234 186 42 46 chr5 124758509 124758814 -78326718 + AluJb SINE Alu 1 304 0 2228 140 8 0 chr5 124759440 124759798 -78325734 - MER46B DNA MER2_type 0 236 1 253 290 32 121 chr5 124759802 124759926 -78325606 + L2 LINE L2 3160 3272 0 201 176 0 0 chr5 124759992 124760026 -78325506 + T-rich Low_complexity Low_complexity 2 35 0 535 289 66 7 chr5 124760203 124760355 -78325177 + MIR SINE MIR 3 163 -99 737 199 0 0 chr5 124760360 124760501 -78325031 + FLAM_C SINE Alu 1 141 -2 1675 192 6 31 chr5 124760503 124760821 -78324711 + AluJo SINE Alu 1 310 -2 249 293 40 10 chr5 124760833 124760932 -78324600 + MIR SINE MIR 161 262 0 280 299 10 10 chr5 124762262 124762359 -78323173 + LTR48B LTR ERV1 4 100 -544 * 1161 214 55 68 chr5 124762333 124762787 -78322745 + MER39 LTR ERV1 260 707 0 316 273 0 0 chr5 124763397 124763463 -78322069 - MIR SINE MIR -196 66 1 327 277 92 17 chr5 124763508 124763627 -78321905 - MIR SINE MIR -65 143 16 289 203 22 51 chr5 124764050 124764188 -78321344 + T-rich Low_complexity Low_complexity 5 138 0 2026 136 3 10 chr5 124765042 124765344 -78320188 - AluJb SINE Alu -2 310 11 2840 156 33 4 chr5 124766134 124766654 -78318878 - L1MB3 LINE L1 -4 6179 5645 339 339 92 28 chr5 124766695 124766884 -78318648 - L1ME3A LINE L1 -290 5880 5670 2385 175 141 12 chr5 124766884 124767386 -78318146 - MLT1F1 LTR MaLR 0 567 1 339 339 92 28 chr5 124767386 124767447 -78318085 - L1ME3A LINE L1 -500 5670 5614 2257 171 58 30 chr5 124767452 124767921 -78317611 - MLT1D LTR MaLR -7 498 17 365 189 42 21 chr5 124768291 124768386 -78317146 - MLT1C LTR MaLR -305 162 66 1190 204 0 14 chr5 124768454 124768665 -78316867 - AluJo SINE Alu -100 212 5 599 320 84 0 chr5 124769365 124769590 -78315942 + MIR SINE MIR 11 254 -8 352 302 34 0 chr5 124769862 124770011 -78315521 + L1M4 LINE L1 2875 3028 -3118 1638 96 74 44 chr5 124770076 124770376 -78315156 - AluSg SINE Alu 0 313 6 248 268 186 15 chr5 124771024 124771423 -78314109 + L1M4 LINE L1 3775 4241 -1905 654 187 81 0 chr5 124771533 124771656 -78313876 - FLAM_C SINE Alu 0 133 1 249 192 50 61 chr5 124771989 124772088 -78313444 + L1M4 LINE L1 4931 5028 -1118 903 201 22 6 chr5 124772458 124772637 -78312895 + MER58A DNA MER1_type 43 224 0 248 213 0 75 chr5 124772976 124773056 -78312476 - L1 LINE L1 -1987 4861 4788 287 263 10 0 chr5 124773322 124773421 -78312111 - L1MEd LINE L1 -4297 2552 2453 766 281 88 75 chr5 124773476 124774079 -78311453 - L1MEd LINE L1 -4921 2108 1472 2151 133 3 16 chr5 124775033 124775349 -78310183 - AluSx SINE Alu 0 312 1 2030 118 16 26 chr5 124775365 124775669 -78309863 - AluSx SINE Alu -11 301 1 34 0 0 0 chr5 124775720 124775754 -78309778 + AT_rich Low_complexity Low_complexity 1 34 0 323 174 0 204 chr5 124776272 124776404 -78309128 - MIR3 SINE MIR -12 196 92 * 1097 289 177 60 chr5 124776357 124776958 -78308574 - L2 LINE L2 -1829 1485 737 2288 123 7 0 chr5 124776958 124777267 -78308265 + AluSx SINE Alu 1 311 -1 1097 289 177 60 chr5 124777267 124777593 -78307939 - L2 LINE L2 -2577 737 450 1166 83 73 44 chr5 124777601 124777805 -78307727 + MER30 DNA MER1_type 1 210 -20 513 326 66 22 chr5 124777832 124778013 -78307519 - L2 LINE L2 -2851 463 275 3933 144 62 93 chr5 124778111 124779022 -78306510 - MER21A LTR ERV1 0 931 49 1709 163 57 3 chr5 124779022 124779305 -78306227 + AluJb SINE Alu 1 298 -14 3933 144 62 93 chr5 124779305 124779339 -78306193 - MER21A LTR ERV1 -882 49 15 243 318 269 14 chr5 124780015 124780238 -78305294 - L2 LINE L2 -1 3271 2992 * 246 352 69 84 chr5 124780236 124780688 -78304844 - L2 LINE L2 -1 3271 2827 1689 151 44 4 chr5 124780804 124781099 -78304433 - AluSx SINE Alu 0 306 1 1871 136 7 24 chr5 124781298 124781592 -78303940 + AluJb SINE Alu 1 289 -23 4047 141 108 9 chr5 124781780 124782532 -78303000 - LTR1B LTR ERV1 0 826 1 636 26 13 0 chr5 124782862 124782940 -78302592 - MADE1 DNA Mariner 0 80 2 1151 81 61 46 chr5 124784328 124784451 -78301081 - MER30 DNA MER1_type -30 200 71 2186 108 0 13 chr5 124784451 124784757 -78300775 - AluSx SINE Alu -10 302 1 1151 81 61 46 chr5 124784757 124784830 -78300702 - MER30 DNA MER1_type -159 71 1 181 402 12 0 chr5 124785277 124785359 -78300173 + L2 LINE L2 2979 3061 -211 523 301 49 63 chr5 124785500 124785972 -78299560 - L2 LINE L2 -39 3274 2737 520 159 71 63 chr5 124785975 124786101 -78299431 - MLT1E2 LTR MaLR -445 181 55 259 267 0 78 chr5 124786536 124786626 -78298906 - L2 LINE L2 0 3313 3231 226 325 123 12 chr5 124786736 124786899 -78298633 + MIR SINE MIR 49 229 -33 324 175 98 137 chr5 124786905 124787088 -78298444 + MER69 DNA AcHobo 2 2526 0 428 299 175 11 chr5 124787262 124787593 -78297939 - L1ME4a LINE L1 -123 5998 5606 1434 193 133 11 chr5 124787593 124787946 -78297586 - MSTD LTR MaLR 0 396 1 428 299 175 11 chr5 124787946 124787962 -78297570 - L1ME4a LINE L1 -515 5606 5594 1988 135 0 0 chr5 124788077 124788387 -78297145 - AluSx SINE Alu 0 310 1 411 335 26 20 chr5 124789257 124789409 -78296123 - MIR SINE MIR -76 186 34 1933 198 23 73 chr5 124789547 124790078 -78295454 + MLT1D LTR MaLR 1 504 -1 757 228 0 0 chr5 124790377 124790526 -78295006 + FRAM SINE Alu 6 154 -22 222 216 39 0 chr5 124790530 124790581 -78294951 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 954 135 0 0 chr5 124791119 124791252 -78294280 - AluSg/x SINE Alu -15 297 165 1730 158 14 7 chr5 124791519 124791803 -78293729 - AluJb SINE Alu -26 286 1 216 97 0 0 chr5 124791822 124791853 -78293679 + (TA)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr5 124791978 124792013 -78293519 + AT_rich Low_complexity Low_complexity 1 35 0 331 289 150 23 chr5 124792728 124792901 -78292631 - L1ME4a LINE L1 -50 6071 5877 2225 105 7 0 chr5 124792959 124793255 -78292277 + AluSc SINE Alu 1 298 -11 629 232 175 16 chr5 124793489 124793683 -78291849 - MIR SINE MIR -30 232 8 630 158 0 75 chr5 124795903 124796036 -78289496 + FLAM_A SINE Alu 1 123 -10 2048 129 7 10 chr5 124796840 124797142 -78288390 - AluJb SINE Alu -1 311 11 674 273 62 41 chr5 124797839 124798307 -78287225 + L1ME LINE L1 5293 5772 -349 415 277 149 20 chr5 124798335 124798530 -78287002 + MIR SINE MIR 29 248 -14 289 244 77 39 chr5 124798583 124798661 -78286871 - L2 LINE L2 -37 3276 3196 365 340 173 6 chr5 124798729 124799085 -78286447 + L2 LINE L2 2644 3057 -215 2134 112 11 0 chr5 124799300 124799586 -78285946 - AluSc SINE Alu -20 289 1 1068 193 66 5 chr5 124799621 124799833 -78285699 + AluJo SINE Alu 2 226 -86 2406 99 0 0 chr5 124800516 124800828 -78284704 - AluSx SINE Alu 0 312 1 190 309 0 0 chr5 124801028 124801083 -78284449 - MIR SINE MIR -37 225 171 267 294 29 0 chr5 124801134 124801202 -78284330 + L2 LINE L2 3203 3272 0 23 0 0 0 chr5 124802170 124802193 -78283339 + AT_rich Low_complexity Low_complexity 1 23 0 35 54 0 0 chr5 124802205 124802261 -78283271 + AT_rich Low_complexity Low_complexity 1 56 0 1759 142 17 37 chr5 124802264 124802416 -78283116 - AluJo SINE Alu -23 289 144 2561 47 0 0 chr5 124802416 124802717 -78282815 + AluY SINE Alu 1 301 -10 1759 142 17 37 chr5 124802717 124802859 -78282673 - AluJo SINE Alu -168 144 1 659 112 0 0 chr5 124803235 124803324 -78282208 - FRAM SINE Alu -47 129 41 247 134 183 207 chr5 124803369 124803533 -78281999 - MER5C DNA MER1_type -164 160 1 2243 121 0 3 chr5 124804266 124804572 -78280960 - AluSx SINE Alu -7 305 1 755 279 74 32 chr5 124804939 124805251 -78280281 + L1MC4a LINE L1 5576 5900 -1908 1823 135 15 68 chr5 124805913 124806238 -78279294 + AluJo SINE Alu 1 308 -4 21 0 0 0 chr5 124807529 124807550 -78277982 + AT_rich Low_complexity Low_complexity 1 21 0 215 246 215 0 chr5 124807600 124807665 -78277867 - MIR SINE MIR -147 115 37 1655 131 0 4 chr5 124808043 124808287 -78277245 - L1PA8 LINE L1 -8 6164 5922 360 225 108 63 chr5 124808289 124808400 -78277132 - MIR SINE MIR -57 151 36 656 236 137 0 chr5 124808963 124809124 -78276408 + MER5A DNA MER1_type 5 187 -2 1860 166 0 0 chr5 124809766 124810055 -78275477 - AluJo SINE Alu -20 292 4 21 0 0 0 chr5 124810286 124810307 -78275225 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 124810752 124810780 -78274752 + AT_rich Low_complexity Low_complexity 1 28 0 238 185 0 92 chr5 124810883 124810948 -78274584 + AluSp SINE Alu 129 187 -116 247 278 11 44 chr5 124810950 124811040 -78274492 + L1ME LINE L1 5742 5828 -293 * 33766 66 3 37 chr5 124811018 124816511 -78269021 - L1PA6 LINE L1 -1 6468 1162 705 69 0 0 chr5 124816509 124816596 -78268936 - L1PA6 LINE L1 -6365 96 10 * 1130 169 18 0 chr5 124816680 124816846 -78268686 + FAM SINE Alu 1 169 -6 246 297 0 0 chr5 124816964 124817028 -78268504 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 2304 91 3 3 chr5 124817377 124817674 -78267858 - AluSc SINE Alu -11 298 2 1973 134 0 14 chr5 124818072 124818356 -78267176 + AluJb SINE Alu 18 297 -15 384 38 0 19 chr5 124818632 124818721 -78266811 + L1PA4 LINE L1 6103 6190 0 456 298 82 0 chr5 124818907 124819078 -78266454 + MIR SINE MIR 66 250 -12 312 70 0 0 chr5 124819083 124819126 -78266406 + (CAT)n Simple_repeat Simple_repeat 2 44 0 533 130 0 43 chr5 124819419 124819511 -78266021 + L1MB7 LINE L1 5568 5655 -529 578 154 0 126 chr5 124819519 124819561 -78265971 + L1MB7 LINE L1 6013 6059 -125 1668 127 15 106 chr5 124819561 124819900 -78265632 - AluJo SINE Alu 0 312 5 578 154 0 126 chr5 124819900 124820000 -78265532 + L1MB7 LINE L1 6059 6137 -47 3994 20 0 2 chr5 124820002 124820472 -78265060 + L1PA4 LINE L1 5716 6184 0 28 71 0 0 chr5 124820564 124820620 -78264912 + AT_rich Low_complexity Low_complexity 1 56 0 2208 108 3 7 chr5 124821426 124821732 -78263800 - AluSx SINE Alu -7 305 1 1954 168 17 112 chr5 124822490 124822972 -78262560 + MER63B DNA MER1_type 1 436 0 3012 211 78 5 chr5 124823337 124823940 -78261592 - MER82 DNA MER2_type -6 647 1 2488 272 80 64 chr5 124824083 124824539 -78260993 + HAL1 LINE L1 314 761 -1746 549 0 0 0 chr5 124824539 124824600 -78260932 + (CA)n Simple_repeat Simple_repeat 2 62 0 2488 272 80 64 chr5 124824600 124824849 -78260683 + HAL1 LINE L1 761 1005 -1502 2000 140 7 0 chr5 124824849 124825134 -78260398 + AluSx SINE Alu 3 289 -23 2488 272 80 64 chr5 124825134 124825841 -78259691 + HAL1 LINE L1 1005 1749 -758 274 266 25 0 chr5 124825845 124825924 -78259608 - MLT1J LTR MaLR -13 498 418 580 280 103 60 chr5 124825954 124826254 -78259278 + HAL1 LINE L1 2183 2495 -12 237 188 104 0 chr5 124826830 124826878 -78258654 + L1ME LINE L1 5760 5812 -309 1028 297 46 14 chr5 124828749 124829096 -78256436 + LTR16A LTR ERVL 26 383 -67 1356 207 71 60 chr5 124829520 124829902 -78255630 + MLT1B LTR MaLR 1 386 -4 847 225 0 6 chr5 124831660 124831833 -78253699 - MLT1C LTR MaLR 0 467 296 * 854 136 38 0 chr5 124831831 124831963 -78253569 - MLT1C LTR MaLR -301 166 30 2288 77 6 52 chr5 124832128 124832270 -78253262 + AluSg SINE Alu 1 148 -162 2212 107 0 0 chr5 124832270 124832583 -78252949 + AluSc SINE Alu 1 309 0 2288 77 6 52 chr5 124832583 124832764 -78252768 + AluSg SINE Alu 148 309 -1 564 299 34 11 chr5 124832776 124832953 -78252579 + MIR SINE MIR 17 197 -65 422 227 159 15 chr5 124832976 124833108 -78252424 - MIR SINE MIR -111 151 1 225 226 32 0 chr5 124835958 124836020 -78249512 - LTR33 LTR ERVL -417 104 41 3768 157 136 15 chr5 124836726 124837503 -78248029 + MER4D LTR ERV1 1 871 -32 272 301 37 59 chr5 124838514 124838650 -78246882 + MIR3 SINE MIR 42 174 -34 228 260 21 52 chr5 124838744 124838840 -78246692 + MIR SINE MIR 18 110 -152 540 322 11 0 chr5 124840088 124840265 -78245267 + MIR SINE MIR 84 262 0 691 155 5 176 chr5 124840282 124840475 -78245057 - FRAM SINE Alu -4 162 3 473 337 140 0 chr5 124840515 124840794 -78244738 + L2 LINE L2 2575 2892 -422 197 287 20 0 chr5 124840967 124841068 -78244464 + GA-rich Low_complexity Low_complexity 3 105 0 237 241 0 19 chr5 124841169 124841223 -78244309 + GA-rich Low_complexity Low_complexity 1 53 0 1972 118 0 14 chr5 124841473 124841778 -78243754 + AluSx SINE Alu 6 306 0 680 297 24 19 chr5 124841822 124841926 -78243606 - MER58C DNA MER1_type -2207 213 111 12520 76 5 0 chr5 124841926 124844253 -78241279 - L1PA7 LINE L1 -7 6147 3811 1858 131 33 0 chr5 124844255 124844407 -78241125 - AluSx SINE Alu -28 284 118 297 0 0 0 chr5 124844407 124844440 -78241092 + (TG)n Simple_repeat Simple_repeat 2 34 0 1858 131 33 0 chr5 124844440 124844562 -78240970 - AluSx SINE Alu -194 118 1 680 297 24 19 chr5 124844562 124844666 -78240866 - MER58C DNA MER1_type -2309 111 1 438 223 122 36 chr5 124845296 124845435 -78240097 - MIR SINE MIR -71 191 41 5763 172 38 16 chr5 124845646 124847131 -78238401 + L1PA16 LINE L1 4126 5638 -528 1755 97 31 23 chr5 124847131 124847390 -78238142 + L1PA16 LINE L1 5904 6164 -2 23 54 0 0 chr5 124847835 124847872 -78237660 + AT_rich Low_complexity Low_complexity 1 37 0 407 145 0 0 chr5 124847932 124847994 -78237538 - MIR3 SINE MIR -21 187 126 252 305 121 21 chr5 124849637 124849778 -78235754 + L3b LINE CR1 1132 1286 -297 199 250 0 62 chr5 124851806 124851870 -78233662 - MIR SINE MIR -83 179 120 2144 80 62 0 chr5 124851870 124852146 -78233386 + AluSp SINE Alu 1 293 -20 184 310 17 0 chr5 124852163 124852221 -78233311 - MIR SINE MIR -74 134 76 774 218 141 105 chr5 124852223 124852723 -78232809 - MLT1H LTR MaLR -4 545 24 2344 149 22 14 chr5 124852723 124853085 -78232447 + MLT1A1 LTR MaLR 1 365 0 774 218 141 105 chr5 124853085 124853108 -78232424 - MLT1H LTR MaLR -525 24 3 182 263 0 53 chr5 124853118 124853175 -78232357 - L2 LINE L2 -652 2662 2609 200 143 24 0 chr5 124853698 124853740 -78231792 + (CA)n Simple_repeat Simple_repeat 2 44 0 2228 99 3 3 chr5 124854246 124854540 -78230992 + AluSp SINE Alu 1 294 -19 1594 152 0 0 chr5 124854585 124854822 -78230710 - AluJo SINE Alu -75 237 1 240 291 21 85 chr5 124855729 124855870 -78229662 + L2 LINE L2 3180 3311 -2 362 207 35 86 chr5 124855945 124855976 -78229556 - MIR SINE MIR -79 183 152 933 258 55 27 chr5 124855976 124856305 -78229227 - MER46C DNA MER2_type 0 338 1 362 207 35 86 chr5 124856305 124856389 -78229143 - MIR SINE MIR -110 152 74 21 0 0 0 chr5 124856497 124856518 -78229014 + AT_rich Low_complexity Low_complexity 1 21 0 1232 162 28 85 chr5 124856732 124856883 -78228649 - MER46A DNA MER2_type -2497 234 76 2204 82 0 49 chr5 124856883 124857188 -78228344 - AluY SINE Alu -21 290 1 1232 162 28 85 chr5 124857188 124857200 -78228332 - MER46A DNA MER2_type -2655 76 65 418 19 0 19 chr5 124857200 124857254 -78228278 - L1PA6 LINE L1 0 6154 6102 1232 162 28 85 chr5 124857254 124857336 -78228196 - MER46A DNA MER2_type -2666 65 2 5832 97 96 107 chr5 124857380 124858968 -78226564 + pTR5 LTR ERV1 191 2438 0 414 0 0 0 chr5 124859551 124859597 -78225935 + (TG)n Simple_repeat Simple_repeat 1 46 0 2237 97 0 17 chr5 124859669 124859969 -78225563 + AluY SINE Alu 1 295 -16 297 0 0 0 chr5 124860243 124860276 -78225256 + (CA)n Simple_repeat Simple_repeat 2 34 0 471 192 125 54 chr5 124861180 124861342 -78224190 + MER5A DNA MER1_type 4 189 0 1463 190 4 11 chr5 124861435 124861698 -78223834 + AluJo SINE Alu 42 302 -10 495 186 41 99 chr5 124861701 124861873 -78223659 - MIR SINE MIR -53 209 48 878 165 34 51 chr5 124861921 124862097 -78223435 + AluJo SINE Alu 117 289 -23 21 36 0 0 chr5 124862100 124862128 -78223404 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 124862162 124862186 -78223346 + (A)n Simple_repeat Simple_repeat 1 24 0 643 241 43 19 chr5 124863188 124863350 -78222182 - L2 LINE L2 0 3272 3107 1478 310 92 52 chr5 124863565 124864633 -78220899 - L2 LINE L2 -416 2898 1789 1133 275 123 13 chr5 124864655 124865162 -78220370 + L2 LINE L2 2759 3308 -5 363 285 81 22 chr5 124865901 124866320 -78219212 + L1MC4a LINE L1 5101 5540 -748 1009 115 0 0 chr5 124866359 124866498 -78219034 - AluSg/x SINE Alu -17 295 157 33057 28 2 0 chr5 124866603 124871518 -78214014 - L1PA4 LINE L1 -3 6152 1230 817 198 49 12 chr5 124872329 124872491 -78213041 + MER5A DNA MER1_type 1 168 -21 196 346 13 13 chr5 124873138 124873216 -78212316 + MIR3 SINE MIR 5 82 -126 2297 109 20 0 chr5 124882231 124882535 -78202997 + AluSx SINE Alu 1 310 -2 2151 114 10 3 chr5 124882901 124883052 -78202480 + AluSx SINE Alu 1 149 -163 180 0 0 0 chr5 124883052 124883072 -78202460 + (G)n Simple_repeat Simple_repeat 1 20 0 2151 114 10 3 chr5 124883072 124883219 -78202313 + AluSx SINE Alu 149 301 -11 1963 134 7 3 chr5 124883356 124883654 -78201878 + AluSx SINE Alu 1 299 -13 2114 112 16 13 chr5 124884684 124884987 -78200545 + AluSx SINE Alu 1 304 -8 1632 124 80 25 chr5 124884994 124885268 -78200264 + AluJb SINE Alu 8 296 -16 241 271 35 0 chr5 124885300 124885385 -78200147 + L1MC4a LINE L1 5842 5929 -1879 1360 154 123 58 chr5 124885601 124885743 -78199789 + AluJo SINE Alu 2 133 -179 2243 100 3 3 chr5 124885743 124886042 -78199490 + AluSg SINE Alu 1 299 -11 1360 154 123 58 chr5 124886042 124886191 -78199341 + AluJo SINE Alu 133 312 0 2150 105 0 0 chr5 124887826 124888103 -78197429 + AluSc SINE Alu 17 293 -16 659 265 19 9 chr5 124888262 124888477 -78197055 - L1ME1 LINE L1 -5 6161 5945 1767 222 64 2 chr5 124888478 124888928 -78196604 - L1ME1 LINE L1 -324 5842 5365 1028 196 13 40 chr5 124889442 124889667 -78195865 + MER20 DNA MER1_type 1 219 0 2023 114 14 10 chr5 124889778 124890067 -78195465 + AluSg SINE Alu 1 290 -20 1603 166 32 18 chr5 124890465 124890742 -78194790 + AluJo SINE Alu 1 281 -31 1577 170 85 3 chr5 124890901 124891184 -78194348 + AluJb SINE Alu 1 306 -6 269 148 82 16 chr5 124891657 124891718 -78193814 - U3 snRNA snRNA -152 65 1 24 0 0 0 chr5 124893230 124893254 -78192278 + AT_rich Low_complexity Low_complexity 1 24 0 2931 202 78 19 chr5 124894192 124895022 -78190510 + L1MB8 LINE L1 5274 6152 -26 570 193 0 53 chr5 124895285 124895399 -78190133 + MIR SINE MIR 43 150 -112 2011 101 93 0 chr5 124895399 124895677 -78189855 + AluSx SINE Alu 1 304 -8 573 318 73 81 chr5 124895764 124896664 -78188868 + L2 LINE L2 2376 3264 -8 23 54 0 0 chr5 124896997 124897034 -78188498 + AT_rich Low_complexity Low_complexity 1 37 0 36 23 0 0 chr5 124897852 124897895 -78187637 + AT_rich Low_complexity Low_complexity 1 43 0 34 0 0 0 chr5 124899395 124899429 -78186103 + AT_rich Low_complexity Low_complexity 1 34 0 695 296 74 23 chr5 124899429 124899861 -78185671 + L1ME LINE L1 5319 5772 -349 472 260 167 20 chr5 124899879 124900083 -78185449 + MIR SINE MIR 15 248 -14 305 303 66 0 chr5 124900134 124900210 -78185322 - L2 LINE L2 -37 3276 3196 275 362 72 16 chr5 124900276 124900630 -78184902 + L2 LINE L2 2643 3057 -215 2108 117 7 0 chr5 124900842 124901132 -78184400 - AluSx SINE Alu -20 292 1 623 176 72 59 chr5 124901534 124901756 -78183776 + L1MC5 LINE L1 7304 7528 -433 304 218 158 0 chr5 124901942 124902043 -78183489 - L2 LINE L2 -64 3249 3133 1234 181 68 12 chr5 124902371 124902620 -78182912 + AluJo SINE Alu 11 273 -39 34 42 0 0 chr5 124902620 124902668 -78182864 + AT_rich Low_complexity Low_complexity 1 48 0 348 206 150 28 chr5 124902682 124902862 -78182670 + HAL1b LINE L1 1188 1343 -5 471 296 163 32 chr5 124903527 124904043 -78181489 + L2 LINE L2 2722 3302 -11 1172 189 26 108 chr5 124904203 124904502 -78181030 - AluJb SINE Alu 0 324 52 2298 120 3 0 chr5 124904502 124904803 -78180729 + AluSx SINE Alu 1 302 -10 1172 189 26 108 chr5 124904803 124904852 -78180680 - AluJb SINE Alu -272 52 1 26 30 0 0 chr5 124905048 124905081 -78180451 + AT_rich Low_complexity Low_complexity 1 33 0 590 230 54 63 chr5 124905431 124905523 -78180009 - L1MC5 LINE L1 -186 7775 7684 2224 120 0 7 chr5 124905523 124905832 -78179700 + AluSx SINE Alu 1 307 -5 590 230 54 63 chr5 124905832 124906070 -78179462 - L1MC5 LINE L1 -277 7684 7448 1134 162 194 12 chr5 124906106 124906359 -78179173 - AluJo SINE Alu -2 300 2 435 219 9 0 chr5 124906364 124906469 -78179063 - L1MC5 LINE L1 -514 7447 7342 575 311 184 58 chr5 124906478 124906722 -78178810 - L2 LINE L2 -771 2543 2331 1651 164 44 34 chr5 124906722 124907015 -78178517 + AluJb SINE Alu 3 298 -14 575 311 184 58 chr5 124907015 124907371 -78178161 - L2 LINE L2 -983 2331 2022 2190 91 14 0 chr5 124907371 124907656 -78177876 + AluSc SINE Alu 1 289 -20 575 311 184 58 chr5 124907656 124908410 -78177122 - L2 LINE L2 -1292 2022 1016 1654 139 0 0 chr5 124908453 124908697 -78176835 + AluSx SINE Alu 61 304 -8 1418 237 113 14 chr5 124909395 124909900 -78175632 - MLT1F1 LTR MaLR -3 564 5 460 374 98 38 chr5 124910162 124910480 -78175052 + L2 LINE L2 2925 3261 -11 321 240 0 5 chr5 124910801 124910893 -78174639 - L1ME1 LINE L1 -1 6333 6086 1539 222 170 54 chr5 124911107 124911237 -78174295 - L2 LINE L2 -2523 791 677 1756 164 7 23 chr5 124911237 124911536 -78173996 + AluJb SINE Alu 1 294 -18 1539 222 170 54 chr5 124911536 124911905 -78173627 - L2 LINE L2 -2637 677 234 2191 134 0 0 chr5 124912156 124912461 -78173071 - AluSx SINE Alu -7 305 1 708 209 0 22 chr5 124913045 124913179 -78172353 - FLAM_C SINE Alu 0 133 3 341 154 64 39 chr5 124913295 124913373 -78172159 - MER2 DNA MER2_type -135 210 131 713 167 0 35 chr5 124913398 124913512 -78172020 - FLAM_C SINE Alu -32 111 2 527 163 16 108 chr5 124913515 124913534 -78171998 - MER2 DNA MER2_type -206 139 120 2329 73 0 11 chr5 124913534 124913844 -78171688 + AluY SINE Alu 1 307 0 527 163 16 108 chr5 124913844 124913952 -78171580 - MER2 DNA MER2_type -225 120 23 21 36 0 0 chr5 124914852 124914880 -78170652 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr5 124915338 124915369 -78170163 + (CA)n Simple_repeat Simple_repeat 2 32 0 2212 67 46 3 chr5 124917304 124917587 -78167945 - AluY SINE Alu -16 295 1 1873 127 10 14 chr5 124917705 124917996 -78167536 + AluJb SINE Alu 22 311 -1 2298 91 3 3 chr5 124918275 124918573 -78166959 + AluSx SINE Alu 1 298 -14 446 200 148 30 chr5 124918612 124918747 -78166785 - MER5A DNA MER1_type -38 151 1 631 261 11 22 chr5 124918781 124918961 -78166571 - MER5B DNA MER1_type 0 178 1 192 176 0 0 chr5 124918989 124919023 -78166509 - MER5B DNA MER1_type -144 34 1 665 131 10 20 chr5 124919057 124919156 -78166376 - AluJ/FLAM SINE Alu -213 99 2 1922 141 3 13 chr5 124919174 124919472 -78166060 - AluJo SINE Alu -17 295 1 1573 244 169 34 chr5 124919527 124919707 -78165825 + HAL1 LINE L1 907 1061 -1446 2317 102 0 0 chr5 124919707 124920012 -78165520 + AluSx SINE Alu 1 305 -7 1573 244 169 34 chr5 124920012 124920724 -78164808 + HAL1 LINE L1 1061 1920 -587 2197 126 7 0 chr5 124920727 124921037 -78164495 + AluSq SINE Alu 1 312 -1 310 277 0 0 chr5 124921069 124921152 -78164380 - MER5A DNA MER1_type -98 91 9 483 231 202 0 chr5 124921157 124921330 -78164202 + HAL1 LINE L1 2094 2301 -206 962 215 168 43 chr5 124921487 124921590 -78163942 + AluJb SINE Alu 2 91 -211 2207 99 0 14 chr5 124921590 124921884 -78163648 - AluSx SINE Alu -22 290 1 962 215 168 43 chr5 124921884 124922036 -78163496 + AluJb SINE Alu 91 289 -13 243 0 0 0 chr5 124922086 124922113 -78163419 + (A)n Simple_repeat Simple_repeat 1 27 0 1552 221 73 39 chr5 124922182 124922249 -78163283 - MSTD LTR MaLR -2 394 331 1457 119 14 9 chr5 124922249 124922467 -78163065 + AluSq SINE Alu 45 263 -50 1552 221 73 39 chr5 124922467 124922780 -78162752 - MSTD LTR MaLR -65 331 1 1656 167 39 0 chr5 124922870 124923152 -78162380 - AluJb SINE Alu -19 293 1 1563 137 140 17 chr5 124923215 124923407 -78162125 + MER44D DNA MER2_type 3 170 -2321 2016 135 46 35 chr5 124923407 124923778 -78161754 - THE1C LTR MaLR 0 375 1 1563 137 140 17 chr5 124923778 124923885 -78161647 + MER44D DNA MER2_type 170 609 0 228 100 0 0 chr5 124923888 124923918 -78161614 + LTR67 LTR ERVL 110 139 -418 * 287 251 43 6 chr5 124923892 124923987 -78161545 + MLT1L LTR MaLR 110 267 -305 * 345 159 111 0 chr5 124923986 124924049 -78161483 + 7SLRNA srpRNA srpRNA 17 86 -234 585 157 0 0 chr5 124924467 124924550 -78160982 + AluJ/FLAM SINE Alu 4 86 -226 2287 88 3 10 chr5 124924657 124924971 -78160561 + AluSp SINE Alu 1 313 0 210 175 25 0 chr5 124925823 124925863 -78159669 + CT-rich Low_complexity Low_complexity 4 44 0 1406 172 62 52 chr5 124926727 124926941 -78158591 + AluJb SINE Alu 1 220 -92 2394 88 3 0 chr5 124926941 124927246 -78158286 + AluSp SINE Alu 1 306 -7 1406 172 62 52 chr5 124927246 124927321 -78158211 + AluJb SINE Alu 220 293 -19 601 170 71 36 chr5 124927335 124927447 -78158085 + FLAM_C SINE Alu 2 117 -26 2261 87 25 0 chr5 124927464 124927750 -78157782 + AluSc SINE Alu 1 293 -16 504 223 45 9 chr5 124929095 124929207 -78156325 + L2 LINE L2 3182 3297 -16 682 234 128 35 chr5 124929228 124929413 -78156119 + L1ME3A LINE L1 5558 5769 -401 1529 163 81 11 chr5 124929413 124929696 -78155836 + AluJb SINE Alu 1 303 -9 682 234 128 35 chr5 124929696 124929736 -78155796 + L1ME3A LINE L1 5769 5804 -366 964 166 21 57 chr5 124929805 124929998 -78155534 + MER20 DNA MER1_type 34 219 0 730 263 64 66 chr5 124930004 124930362 -78155170 + L1ME3A LINE L1 5808 6162 -4 1194 143 56 52 chr5 124930890 124931312 -78154220 + MER51A LTR ERV1 2 634 0 368 149 149 11 chr5 124931367 124931461 -78154071 + MER113 DNA MER1_type? 64 170 -351 316 222 25 37 chr5 124931623 124931704 -78153828 + MER113 DNA MER1_type? 405 484 -37 2174 105 7 0 chr5 124932569 124932864 -78152668 + AluSg SINE Alu 1 297 -13 5974 118 43 63 chr5 124932910 124933143 -78152389 + Tigger1 DNA MER2_type 1 237 -2181 2051 87 25 4 chr5 124933143 124933419 -78152113 + AluSc SINE Alu 1 282 -27 5974 118 43 63 chr5 124933419 124934273 -78151259 + Tigger1 DNA MER2_type 237 1066 -1352 9369 113 17 34 chr5 124934283 124934609 -78150923 + Tigger1 DNA MER2_type 951 1281 -1137 1799 155 7 14 chr5 124934609 124934900 -78150632 - AluJo SINE Alu -23 289 1 9369 113 17 34 chr5 124934900 124936064 -78149468 + Tigger1 DNA MER2_type 1281 2417 -1 222 235 86 25 chr5 124936287 124936368 -78149164 - MIR SINE MIR -140 122 37 3875 174 57 18 chr5 124937239 124937963 -78147569 + L1M4c LINE L1 18 769 -5615 3678 118 23 74 chr5 124938111 124938839 -78146693 + L1M4c LINE L1 771 1461 -4923 701 236 72 28 chr5 124938987 124939206 -78146326 - MLT1G1 LTR MaLR 0 595 300 1809 158 140 28 chr5 124939263 124939663 -78145869 + MER31B LTR ERV1 1 445 -21 592 240 40 10 chr5 124939673 124939863 -78145669 - MLT1G1 LTR MaLR -372 183 3 2145 122 0 3 chr5 124940337 124940633 -78144899 - AluSc SINE Alu -14 295 1 232 293 136 46 chr5 124940822 124941191 -78144341 + HAL1b LINE L1 327 728 -620 2314 99 3 6 chr5 124941651 124941965 -78143567 - AluSp SINE Alu 0 313 1 856 118 0 8 chr5 124941978 124942097 -78143435 - FLAM_C SINE Alu -25 118 1 2088 109 0 4 chr5 124942160 124942436 -78143096 + AluSx SINE Alu 1 275 -37 485 312 98 23 chr5 124943325 124943591 -78141941 + LTR67 LTR ERVL 2 287 -270 2009 106 30 13 chr5 124943975 124944277 -78141255 - AluSc SINE Alu -2 307 1 345 151 0 0 chr5 124944463 124944516 -78141016 - AluJo SINE Alu -11 291 239 658 158 79 0 chr5 124944518 124944619 -78140913 - AluJo SINE Alu -112 200 92 1028 164 49 44 chr5 124944625 124944850 -78140682 - AluJo SINE Alu -11 301 76 1464 170 11 0 chr5 124946986 124947257 -78138275 - L1MA4 LINE L1 -11 6289 6016 865 142 0 15 chr5 124948910 124949044 -78136488 - FLAM_C SINE Alu 0 133 2 286 298 50 16 chr5 124949072 124949193 -78136339 + L3b LINE CR1 1261 1385 -198 1514 245 5 57 chr5 124950730 124951166 -78134366 - L1ME1 LINE L1 -10 6156 5744 1513 226 39 44 chr5 124951166 124951555 -78133977 + MLT1B LTR MaLR 1 387 -3 182 341 236 8 chr5 124951967 124952090 -78133442 - MER5A DNA MER1_type -35 154 4 231 36 0 0 chr5 124953113 124953141 -78132391 + (ATG)n Simple_repeat Simple_repeat 3 30 0 1620 195 7 23 chr5 124954165 124954472 -78131060 + AluJo SINE Alu 1 302 -10 38074 88 11 10 chr5 124954686 124960831 -78124701 + L1PA6 LINE L1 4 6154 0 4995 186 34 8 chr5 124960838 124962540 -78122992 + L1MB3 LINE L1 4444 6183 0 856 221 20 15 chr5 124963113 124963308 -78122224 - MER20 DNA MER1_type 0 219 24 204 380 31 12 chr5 124963541 124963704 -78121828 - L2 LINE L2 -642 2672 2507 2369 94 3 0 chr5 124963944 124964243 -78121289 - AluSq SINE Alu -13 300 1 189 121 86 69 chr5 124964456 124964514 -78121018 + L3b LINE CR1 1296 1354 -229 268 267 35 17 chr5 124965491 124965607 -78119925 + L1M4 LINE L1 4123 4240 -1906 219 255 0 0 chr5 124965909 124965956 -78119576 + (TATG)n Simple_repeat Simple_repeat 2 48 0 7045 115 36 64 chr5 124965957 124966302 -78119230 + Tigger3b DNA MER2_type 1 354 -2674 2239 92 0 0 chr5 124966302 124966621 -78118911 + AluSx SINE Alu 1 319 0 7045 115 36 64 chr5 124966621 124966932 -78118600 + Tigger3b DNA MER2_type 354 672 -2356 991 119 0 15 chr5 124966932 124967066 -78118466 - FLAM_C SINE Alu 0 133 2 7045 115 36 64 chr5 124967066 124967644 -78117888 + Tigger3b DNA MER2_type 672 1202 -29 288 119 24 0 chr5 124967674 124967716 -78117816 + Tigger3b DNA MER2_type 1199 1241 0 1706 181 10 0 chr5 124967904 124968202 -78117330 + AluJo SINE Alu 1 301 -11 471 229 27 66 chr5 124968488 124968671 -78116861 - L1ME4a LINE L1 -3 6118 5943 30 77 0 0 chr5 124968764 124968829 -78116703 + AT_rich Low_complexity Low_complexity 1 65 0 2028 126 7 7 chr5 124968835 124969137 -78116395 + AluSx SINE Alu 1 302 -10 321 233 100 0 chr5 124969150 124969240 -78116292 + L2 LINE L2 3215 3313 0 405 298 18 0 chr5 124969255 124969369 -78116163 - MER5A DNA MER1_type 0 189 74 1891 147 47 3 chr5 124969755 124970074 -78115458 - L1MA9 LINE L1 0 6312 5980 269 316 52 0 chr5 124970103 124970239 -78115293 - HAL1b LINE L1 -2 1346 1204 6098 113 47 1 chr5 124970261 124970787 -78114745 - L1PA15 LINE L1 -1 6815 6314 2772 99 6 0 chr5 124970787 124971140 -78114392 - THE1A LTR MaLR 0 355 1 6098 113 47 1 chr5 124971140 124972112 -78113420 - L1PA15 LINE L1 -502 6314 5294 10470 209 11 20 chr5 124972112 124975306 -78110226 - L1PA15 LINE L1 -2299 4498 1324 2935 114 15 37 chr5 124975429 124975884 -78109648 + MER65A LTR ERV1 1 445 0 1666 256 29 19 chr5 124976037 124976419 -78109113 - LTR16C LTR ERVL -2 489 99 2109 116 0 7 chr5 124976419 124976751 -78108781 + AluSx SINE Alu 1 330 0 1666 256 29 19 chr5 124976751 124976843 -78108689 - LTR16C LTR ERVL -392 99 9 634 185 9 0 chr5 124977219 124977327 -78108205 + MLT1F1 LTR MaLR 1 109 -458 896 151 0 0 chr5 124977341 124977467 -78108065 - FLAM_C SINE Alu -17 126 1 830 222 91 53 chr5 124977467 124977871 -78107661 + MLT1F1 LTR MaLR 94 565 -2 2589 61 3 0 chr5 124978051 124978361 -78107171 - AluY SINE Alu 0 311 1 1551 176 34 37 chr5 124978378 124978673 -78106859 - AluJo SINE Alu -18 294 1 27 49 0 0 chr5 124979258 124979299 -78106233 + AT_rich Low_complexity Low_complexity 1 41 0 2129 100 24 14 chr5 124979627 124979916 -78105616 + AluSx SINE Alu 1 292 -20 2149 108 7 0 chr5 124980912 124981208 -78104324 + AluSg SINE Alu 7 304 -6 2545 17 42 0 chr5 124982212 124982501 -78103031 + AluY SINE Alu 1 301 -10 271 341 0 33 chr5 124982610 124982792 -78102740 + GA-rich Low_complexity Low_complexity 2 177 0 336 239 8 103 chr5 124982828 124982945 -78102587 + MIR SINE MIR 81 186 -76 317 233 0 11 chr5 124982949 124983039 -78102493 + L1MC5 LINE L1 7399 7487 -474 475 331 43 5 chr5 124983314 124983498 -78102034 + MIR SINE MIR 59 249 -13 186 323 10 115 chr5 124983541 124983637 -78101895 - L2 LINE L2 -95 3177 3092 510 276 36 38 chr5 124984159 124984362 -78101170 + MIR SINE MIR 8 208 -54 25 0 0 0 chr5 124984874 124984899 -78100633 + AT_rich Low_complexity Low_complexity 1 25 0 290 254 35 50 chr5 124984909 124985029 -78100503 - MIR SINE MIR -63 145 42 291 285 135 76 chr5 124985638 124985926 -78099606 - L2 LINE L2 -161 3111 2807 2064 115 31 0 chr5 124986159 124986445 -78099087 + AluSx SINE Alu 1 295 -17 1182 299 116 36 chr5 124987862 124987975 -78097557 + L2 LINE L2 1932 2035 -1279 1861 146 0 61 chr5 124987975 124988303 -78097229 - AluJb SINE Alu -4 308 1 1182 299 116 36 chr5 124988303 124988728 -78096804 + L2 LINE L2 2035 2531 -783 2240 96 3 20 chr5 124988728 124989029 -78096503 - AluSq SINE Alu -17 296 1 1182 299 116 36 chr5 124989029 124989125 -78096407 + L2 LINE L2 2531 2618 -696 472 304 139 32 chr5 124989725 124990070 -78095462 + L2 LINE L2 2908 3289 -24 227 296 82 31 chr5 124990267 124990365 -78095167 - L2 LINE L2 -8 3305 3203 180 282 26 51 chr5 124990346 124990424 -78095108 + MIR SINE MIR 154 229 -33 * 1050 137 19 0 chr5 124990465 124990626 -78094906 + AluSq SINE Alu 137 300 -13 1406 172 62 52 chr5 124991731 124991945 -78093587 + AluJb SINE Alu 1 220 -92 2359 95 3 0 chr5 124991945 124992251 -78093281 + AluSp SINE Alu 1 307 -6 1406 172 62 52 chr5 124992251 124992326 -78093206 + AluJb SINE Alu 220 293 -19 601 170 71 36 chr5 124992340 124992452 -78093080 + FLAM_C SINE Alu 2 117 -26 2165 90 24 7 chr5 124992469 124992757 -78092775 + AluSc SINE Alu 1 293 -16 24 0 0 0 chr5 124993367 124993391 -78092141 + AT_rich Low_complexity Low_complexity 1 24 0 504 223 45 9 chr5 124994141 124994253 -78091279 + L2 LINE L2 3182 3297 -16 647 231 133 36 chr5 124994274 124994458 -78091074 + L1ME3A LINE L1 5558 5769 -401 1529 163 81 11 chr5 124994458 124994741 -78090791 + AluJb SINE Alu 1 303 -9 647 231 133 36 chr5 124994741 124994781 -78090751 + L1ME3A LINE L1 5769 5804 -366 956 160 21 62 chr5 124994850 124995044 -78090488 + MER20 DNA MER1_type 34 219 0 730 263 64 66 chr5 124995050 124995408 -78090124 + L1ME3A LINE L1 5808 6162 -4 1179 137 64 71 chr5 124995934 124996359 -78089173 + MER51A LTR ERV1 2 634 0 390 138 149 11 chr5 124996414 124996508 -78089024 + MER113 DNA MER1_type? 64 170 -351 2039 87 29 0 chr5 124997688 124997963 -78087569 + AluSg SINE Alu 1 283 -27 4877 115 26 58 chr5 124997972 124998817 -78086715 + Tigger1 DNA MER2_type 249 1066 -1352 9205 119 17 34 chr5 124998827 124999153 -78086379 + Tigger1 DNA MER2_type 951 1281 -1137 1799 155 7 14 chr5 124999153 124999444 -78086088 - AluJo SINE Alu -23 289 1 9205 119 17 34 chr5 124999444 125000609 -78084923 + Tigger1 DNA MER2_type 1281 2417 -1 222 235 86 25 chr5 125000832 125000913 -78084619 - MIR SINE MIR -140 122 37 3391 192 26 20 chr5 125001784 125002425 -78083107 + L1M4c LINE L1 18 662 -5722 228 298 122 15 chr5 125003739 125003870 -78081662 - MER5A DNA MER1_type -2 187 43 256 350 52 0 chr5 125003908 125004005 -78081527 + L2 LINE L2 3151 3252 -20 307 247 135 0 chr5 125004750 125004839 -78080693 + MARNA DNA Mariner 462 562 -24 260 237 82 62 chr5 125004752 125004849 -78080683 - MARNA DNA Mariner -465 121 23 * 373 120 56 8 chr5 125005100 125005225 -78080307 + (TA)n Simple_repeat Simple_repeat 2 132 0 253 82 41 41 chr5 125005223 125005296 -78080236 + (CAT)n Simple_repeat Simple_repeat 2 74 0 * 2132 119 0 7 chr5 125005608 125005902 -78079630 + AluSc SINE Alu 1 292 -17 1131 170 112 0 chr5 125005912 125006206 -78079326 + L1MC4 LINE L1 7715 8041 -1 313 167 67 0 chr5 125013667 125013757 -78071775 + (CACAA)n Simple_repeat Simple_repeat 4 99 0 212 240 20 41 chr5 125013862 125014008 -78071524 + A-rich Low_complexity Low_complexity 5 147 0 1674 104 0 0 chr5 125014382 125014602 -78070930 - AluSx SINE Alu -92 220 1 326 289 125 0 chr5 125014888 125015016 -78070516 + MIR SINE MIR 75 218 -44 1328 154 29 8 chr5 125015972 125016212 -78069320 + AluSx SINE Alu 1 245 -67 1493 131 21 4 chr5 125016825 125017062 -78068470 + AluSx SINE Alu 1 241 -71 180 107 18 36 chr5 125017165 125017221 -78068311 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 295 177 61 30 chr5 125017233 125017397 -78068135 + (CACAA)n Simple_repeat Simple_repeat 2 170 0 410 175 27 60 chr5 125017407 125017663 -78067869 + (CAAA)n Simple_repeat Simple_repeat 1 247 0 387 292 50 25 chr5 125019590 125019710 -78065822 + L2 LINE L2 3191 3313 0 848 173 0 0 chr5 125019956 125020089 -78065443 - FLAM_A SINE Alu 0 133 1 228 235 86 25 chr5 125020879 125020960 -78064572 + MIR SINE MIR 37 122 -140 5058 120 38 6 chr5 125021178 125022067 -78063465 - Tigger1 DNA MER2_type -1 2417 1500 180 0 0 0 chr5 125023190 125023210 -78062322 + (T)n Simple_repeat Simple_repeat 1 20 0 872 171 0 0 chr5 125024085 125024225 -78061307 - FLAM_C SINE Alu -3 140 1 718 293 237 27 chr5 125024240 125025030 -78060502 - L2 LINE L2 -280 2992 2035 1515 190 18 11 chr5 125026628 125026907 -78058625 - AluJo SINE Alu -31 281 1 1759 162 3 26 chr5 125026963 125027271 -78058261 + AluJb SINE Alu 2 302 -10 731 178 7 22 chr5 125027628 125027763 -78057769 - FLAM_C SINE Alu -10 133 1 306 0 0 0 chr5 125027914 125027948 -78057584 + (TG)n Simple_repeat Simple_repeat 2 35 0 745 274 5 29 chr5 125028157 125028365 -78057167 + MIR SINE MIR 6 208 -54 265 331 53 30 chr5 125028421 125028554 -78056978 + MIR3 SINE MIR 72 207 -1 21 57 0 0 chr5 125029671 125029706 -78055826 + AT_rich Low_complexity Low_complexity 1 35 0 929 168 133 15 chr5 125029961 125030157 -78055375 + MER20 DNA MER1_type 1 219 0 549 240 67 56 chr5 125030246 125030425 -78055107 + MIR SINE MIR 48 228 -34 187 299 128 17 chr5 125030594 125030711 -78054821 + MIR SINE MIR 103 232 -30 2299 109 0 3 chr5 125030972 125031284 -78054248 + AluSx SINE Alu 1 311 -1 2154 155 0 0 chr5 125031325 125031629 -78053903 - AluSq SINE Alu -7 306 3 768 167 10 145 chr5 125031662 125032006 -78053526 - L1M3 LINE L1 -708 5472 5176 1860 128 3 20 chr5 125032202 125032500 -78053032 + AluY SINE Alu 4 296 -15 2114 107 3 7 chr5 125033658 125033958 -78051574 + AluSc SINE Alu 1 299 -10 737 266 64 43 chr5 125034036 125034363 -78051169 + MER21B LTR ERV1 397 730 -133 416 265 38 15 chr5 125034415 125034547 -78050985 + MER21B LTR ERV1 605 739 -124 1718 130 51 0 chr5 125034603 125034857 -78050675 + AluSx SINE Alu 1 267 -45 765 260 46 40 chr5 125035001 125035328 -78050204 - HAL1 LINE L1 -977 1530 1202 1180 279 106 58 chr5 125035333 125036132 -78049400 - HAL1 LINE L1 -1649 858 21 22 35 0 0 chr5 125036566 125036595 -78048937 + AT_rich Low_complexity Low_complexity 1 29 0 2150 119 0 7 chr5 125036705 125037007 -78048525 - AluSx SINE Alu -1 311 12 1953 181 0 0 chr5 125037076 125037386 -78048146 + AluJb SINE Alu 1 310 -2 1392 127 13 9 chr5 125037400 125037629 -78047903 + L1MA2 LINE L1 1004 1233 -6332 186 0 88 0 chr5 125037630 125037664 -78047868 + T-rich Low_complexity Low_complexity 1 37 0 2082 63 4 0 chr5 125037670 125037925 -78047607 - AluY SINE Alu -55 256 1 2020 134 0 0 chr5 125037937 125038252 -78047280 - AluSx SINE Alu 0 315 1 968 124 0 0 chr5 125038259 125038388 -78047144 - AluSq/x SINE Alu -183 129 1 7021 141 19 24 chr5 125038388 125040416 -78045116 + L1MA2 LINE L1 5312 7328 -395 2082 119 7 0 chr5 125040416 125040694 -78044838 + AluSx SINE Alu 1 280 -32 7021 141 19 24 chr5 125040694 125041087 -78044445 + L1MA2 LINE L1 7328 7722 -1 657 283 50 16 chr5 125041418 125041676 -78043856 + L1ME LINE L1 5502 5768 -394 38 39 0 0 chr5 125041843 125041895 -78043637 + AT_rich Low_complexity Low_complexity 1 52 0 2236 123 0 0 chr5 125042256 125042558 -78042974 + AluSx SINE Alu 1 302 -10 1718 130 59 0 chr5 125042858 125043097 -78042435 + AluJo SINE Alu 1 253 -59 942 104 0 22 chr5 125043806 125043941 -78041591 - FLAM_C SINE Alu -1 132 1 252 286 140 11 chr5 125043943 125044121 -78041411 + L1ME LINE L1 5585 5785 -336 2340 75 0 0 chr5 125044131 125044424 -78041108 - AluY SINE Alu -18 293 1 1910 131 49 26 chr5 125044432 125044737 -78040795 - AluSx SINE Alu 0 312 1 1263 153 0 20 chr5 125044793 125044996 -78040536 - AluJb SINE Alu 0 312 114 1118 278 63 21 chr5 125045341 125045862 -78039670 - HAL1 LINE L1 -354 2153 1611 1296 253 65 97 chr5 125045883 125046229 -78039303 + MER21B LTR ERV1 3 359 -504 2253 103 0 3 chr5 125046229 125046530 -78039002 + AluSg SINE Alu 1 300 -10 1296 253 65 97 chr5 125046530 125046935 -78038597 + MER21B LTR ERV1 359 730 -133 416 265 38 15 chr5 125046987 125047119 -78038413 + MER21B LTR ERV1 605 739 -124 1718 130 51 0 chr5 125047175 125047429 -78038103 + AluSx SINE Alu 1 267 -45 785 262 43 40 chr5 125047574 125047902 -78037630 - HAL1 LINE L1 -977 1530 1202 1220 279 105 58 chr5 125047907 125048707 -78036825 - HAL1 LINE L1 -1649 858 21 22 35 0 0 chr5 125049141 125049170 -78036362 + AT_rich Low_complexity Low_complexity 1 29 0 2310 100 0 6 chr5 125049280 125049591 -78035941 - AluSg SINE Alu -1 309 1 22 35 0 0 chr5 125049804 125049833 -78035699 + AT_rich Low_complexity Low_complexity 1 29 0 1292 126 63 25 chr5 125049886 125050125 -78035407 - MER1B DNA MER1_type -4 335 128 2059 107 7 17 chr5 125050927 125051225 -78034307 + AluSg SINE Alu 2 296 -14 1878 149 10 0 chr5 125051395 125051697 -78033835 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr5 125051953 125051976 -78033556 + AT_rich Low_complexity Low_complexity 1 23 0 731 179 7 0 chr5 125052181 125052321 -78033211 + MER46A DNA MER2_type 11 151 -85 444 291 93 4 chr5 125052446 125052704 -78032828 + L1ME LINE L1 3942 4222 -1924 295 290 25 12 chr5 125052782 125052944 -78032588 + L1ME LINE L1 4352 4515 -1631 768 239 137 5 chr5 125052970 125053167 -78032365 - MIR SINE MIR -24 238 16 357 246 134 35 chr5 125053167 125053451 -78032081 + L1ME LINE L1 4533 4844 -1302 345 255 19 9 chr5 125053539 125053645 -78031887 + (TA)n Simple_repeat Simple_repeat 1 107 0 312 309 89 13 chr5 125053995 125054231 -78031301 + L1ME LINE L1 5395 5648 -514 900 161 69 65 chr5 125054244 125054367 -78031165 + MER58A DNA MER1_type 6 132 -2288 2246 135 0 0 chr5 125054367 125054679 -78030853 + AluSx SINE Alu 1 312 0 900 161 69 65 chr5 125054679 125054772 -78030760 + MER58A DNA MER1_type 132 223 -1 243 26 51 0 chr5 125054834 125054873 -78030659 - L1PA2 LINE L1 -2 6153 6113 310 265 84 60 chr5 125055193 125055304 -78030228 - L1M LINE L1 -749 5425 5307 794 209 43 0 chr5 125055304 125055467 -78030065 + FAM SINE Alu 3 172 -3 310 265 84 60 chr5 125055467 125055521 -78030011 - L1M LINE L1 -867 5307 5256 535 325 77 16 chr5 125055651 125056026 -78029506 - L1M4 LINE L1 -1077 5069 4672 391 325 41 69 chr5 125056186 125056432 -78029100 - L1M4 LINE L1 -1817 4329 4091 890 195 0 19 chr5 125056474 125056633 -78028899 - AluJo/FRAM SINE Alu -13 299 144 364 207 2 0 chr5 125056634 125056709 -78028823 - AluJ/FLAM SINE Alu -238 64 1 436 268 32 100 chr5 125057039 125057187 -78028345 - L1MC/D LINE L1 -2145 5663 5507 2130 148 0 0 chr5 125057187 125057497 -78028035 + AluSx SINE Alu 1 310 -2 436 268 32 100 chr5 125057497 125057748 -78027784 - L1MC/D LINE L1 -2301 5507 5291 1600 156 109 14 chr5 125057760 125058043 -78027489 - AluJo SINE Alu -1 311 2 516 293 44 0 chr5 125058642 125058912 -78026620 - L1MC/D LINE L1 -860 5286 5005 2199 109 48 28 chr5 125059172 125059529 -78026003 + THE1B LTR MaLR 1 364 0 1532 123 123 0 chr5 125059547 125059791 -78025741 + AluSx SINE Alu 27 300 -12 2169 116 10 0 chr5 125062712 125063004 -78022528 + AluY SINE Alu 1 295 -16 22 35 0 0 chr5 125063058 125063087 -78022445 + AT_rich Low_complexity Low_complexity 1 29 0 561 200 0 0 chr5 125063087 125063192 -78022340 - U6 snRNA snRNA -2 105 1 2101 132 0 23 chr5 125064681 125064991 -78020541 - AluSx SINE Alu -1 311 9 22 0 0 0 chr5 125065927 125065949 -78019583 + AT_rich Low_complexity Low_complexity 1 22 0 1776 157 19 51 chr5 125066778 125067090 -78018442 + AluJb SINE Alu 1 302 -10 945 133 205 0 chr5 125067116 125067311 -78018221 - MER46A DNA MER2_type 0 236 2 341 278 232 14 chr5 125067390 125067735 -78017797 - L1MC/D LINE L1 -2041 5767 5348 371 152 45 0 chr5 125067849 125067915 -78017617 + Tigger2 DNA MER2_type 1 69 -2649 * 1119 143 87 13 chr5 125067906 125068137 -78017395 + Tigger2 DNA MER2_type 2471 2718 0 2225 127 0 0 chr5 125068738 125069038 -78016494 + AluSx SINE Alu 1 300 -12 239 177 32 48 chr5 125069418 125069480 -78016052 + L2 LINE L2 3253 3313 0 389 284 71 0 chr5 125069495 125069636 -78015896 - MIR SINE MIR 0 262 112 335 268 72 13 chr5 125069743 125069896 -78015636 + HAL1 LINE L1 1234 1395 -1112 305 217 14 0 chr5 125069899 125069968 -78015564 + HAL1 LINE L1 1441 1510 -997 310 245 118 0 chr5 125069983 125070085 -78015447 + HAL1 LINE L1 1560 1673 -834 300 323 0 40 chr5 125070156 125070255 -78015277 + HAL1 LINE L1 1830 1924 -583 191 100 0 50 chr5 125070674 125070714 -78014818 + (TATATG)n Simple_repeat Simple_repeat 3 40 0 269 256 167 0 chr5 125070776 125070866 -78014666 + HAL1 LINE L1 2250 2354 -153 318 306 116 0 chr5 125071787 125071908 -78013624 - MIR SINE MIR -44 218 84 2291 100 10 3 chr5 125072205 125072515 -78013017 + AluSx SINE Alu 1 312 0 714 182 52 3 chr5 125072533 125072693 -78012839 + L1MA5A LINE L1 5947 6105 -207 373 271 0 0 chr5 125072696 125072818 -78012714 + (TACTG)n Simple_repeat Simple_repeat 3 124 0 1035 137 71 0 chr5 125072824 125073035 -78012497 + L1MA5A LINE L1 6072 6297 0 702 164 0 89 chr5 125073175 125073211 -78012321 - FLAM_A SINE Alu -169 133 95 2150 131 3 7 chr5 125073211 125073516 -78012016 + AluSq SINE Alu 1 304 -9 702 164 0 89 chr5 125073516 125073625 -78011907 - FLAM_A SINE Alu -207 95 1 1468 142 0 17 chr5 125073708 125073941 -78011591 + AluSg/x SINE Alu 84 312 0 256 221 244 12 chr5 125075518 125075604 -78009928 - MIR SINE MIR -63 145 40 23 0 0 0 chr5 125075897 125075920 -78009612 + AT_rich Low_complexity Low_complexity 1 23 0 1729 159 7 36 chr5 125076152 125076453 -78009079 + AluJo SINE Alu 11 302 -10 279 358 186 22 chr5 125076785 125077290 -78008242 + L2 LINE L2 2136 2723 -591 2400 49 0 29 chr5 125077292 125077600 -78007932 - AluY SINE Alu -12 299 1 687 161 161 15 chr5 125077639 125077776 -78007756 - MER5A DNA MER1_type 0 189 33 24 77 0 0 chr5 125078002 125078054 -78007478 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 125078294 125078315 -78007217 + AT_rich Low_complexity Low_complexity 1 21 0 255 182 0 0 chr5 125078490 125078534 -78006998 - MARNA DNA Mariner -94 492 449 264 283 102 18 chr5 125078543 125078709 -78006823 + MARNA DNA Mariner 168 347 -239 2313 213 97 36 chr5 125078786 125079769 -78005763 - L1ME3 LINE L1 -81 6876 5830 401 245 58 0 chr5 125079778 125079917 -78005615 - L1M4 LINE L1 -965 5181 5035 638 225 91 59 chr5 125079920 125080401 -78005131 - L1ME3 LINE L1 -4887 1536 1227 2371 95 0 0 chr5 125080448 125080743 -78004789 + AluY SINE Alu 2 296 -15 2372 88 3 0 chr5 125081901 125082207 -78003325 + AluSc SINE Alu 1 307 -2 21 0 0 0 chr5 125082479 125082500 -78003032 + AT_rich Low_complexity Low_complexity 1 21 0 1841 117 90 0 chr5 125082653 125082919 -78002613 + AluSq SINE Alu 1 290 -23 2231 100 3 7 chr5 125082932 125083242 -78002290 + AluSg SINE Alu 1 309 -1 617 195 79 69 chr5 125083375 125083693 -78001839 - L1MC5 LINE L1 -32 7929 7609 213 65 0 0 chr5 125083838 125083869 -78001663 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 1173 190 20 5 chr5 125083909 125084104 -78001428 - AluJo SINE Alu -114 198 1 1356 159 17 4 chr5 125084506 125084738 -78000794 + MER46A DNA MER2_type 2 236 0 819 131 8 0 chr5 125085596 125085726 -77999806 - FLAM_C SINE Alu 0 133 3 342 260 69 55 chr5 125085926 125086110 -77999422 - MIR3 SINE MIR -17 191 2 358 257 122 46 chr5 125087094 125087695 -77997837 + L1MEc LINE L1 1012 1615 -4600 1743 139 76 7 chr5 125087902 125088190 -77997342 + AluSg SINE Alu 1 308 -2 956 255 156 37 chr5 125088325 125089402 -77996130 + L1MEc LINE L1 2372 3576 -2639 749 123 0 0 chr5 125089402 125089524 -77996008 + L1MA4A LINE L1 6159 6280 -23 383 237 44 0 chr5 125089530 125089644 -77995888 + L1MEc LINE L1 3553 3671 -2544 370 242 184 79 chr5 125089719 125089996 -77995536 + L2 LINE L2 3006 3311 -2 286 339 106 13 chr5 125090556 125090783 -77994749 + MLT1L LTR MaLR 344 591 -24 450 255 44 25 chr5 125090860 125091021 -77994511 - MER20B DNA MER1_type -17 202 36 1951 124 35 0 chr5 125091233 125091515 -77994017 + AluSx SINE Alu 1 292 -20 710 232 167 4 chr5 125091754 125092000 -77993532 + MLT1L LTR MaLR 252 537 -78 2292 107 0 0 chr5 125092004 125092302 -77993230 - AluSx SINE Alu -14 298 1 1347 219 13 36 chr5 125092502 125092803 -77992729 + AluJb SINE Alu 2 295 -17 886 197 6 11 chr5 125093455 125093633 -77991899 - AluJo SINE Alu -15 297 121 203 293 74 83 chr5 125093659 125093781 -77991751 - L2 LINE L2 -1230 2084 1963 2136 133 0 45 chr5 125093781 125094134 -77991398 - MER1B DNA MER1_type 0 337 1 203 293 74 83 chr5 125094134 125094240 -77991292 - L2 LINE L2 -1351 1963 1858 390 250 116 73 chr5 125094261 125094493 -77991039 - MIR SINE MIR -10 252 11 1754 166 7 17 chr5 125095272 125095573 -77989959 - AluJb SINE Alu -14 298 1 184 277 0 0 chr5 125097924 125097971 -77987561 - MIR SINE MIR -10 252 206 811 271 139 33 chr5 125098207 125098691 -77986841 - L2 LINE L2 -3 3310 2761 634 314 94 30 chr5 125098720 125099125 -77986407 + L2 LINE L2 2883 3313 0 377 196 171 11 chr5 125099397 125099520 -77986012 - MIR SINE MIR -62 146 46 25 75 0 0 chr5 125099734 125099787 -77985745 + AT_rich Low_complexity Low_complexity 1 53 0 1865 221 28 15 chr5 125100311 125100772 -77984760 + MLT1C LTR MaLR 1 467 0 247 308 83 51 chr5 125100859 125101015 -77984517 + MIR SINE MIR 77 237 -25 419 301 161 24 chr5 125101213 125101542 -77983990 - LTR67 LTR ERVL -55 502 129 745 60 36 121 chr5 125101543 125101642 -77983890 - Charlie5 DNA MER1_type -4 2581 2500 1631 171 18 4 chr5 125101642 125101916 -77983616 + AluJo SINE Alu 21 298 -14 745 60 36 121 chr5 125101916 125101982 -77983550 - Charlie5 DNA MER1_type -85 2500 2430 382 167 0 0 chr5 125101984 125102050 -77983482 - Charlie5 DNA MER1_type -2546 66 1 317 308 128 36 chr5 125102339 125102534 -77982998 + MIR SINE MIR 14 226 -36 1180 202 58 19 chr5 125102534 125102792 -77982740 - MLT2B2 LTR ERVL 0 515 248 1130 118 0 0 chr5 125102785 125102954 -77982578 - MLT2B1 LTR ERVL -351 169 1 * 299 194 22 33 chr5 125103381 125103477 -77982055 + L1MC5 LINE L1 7844 7995 0 1879 232 103 12 chr5 125103584 125104089 -77981443 + MER69 DNA AcHobo 18 568 -1958 1222 191 130 10 chr5 125104137 125104529 -77981003 + MER69 DNA AcHobo 2032 2470 -56 3319 224 80 30 chr5 125104550 125104855 -77980677 + L1M4 LINE L1 2524 2812 -3334 2452 80 0 0 chr5 125104855 125105154 -77980378 - AluSq SINE Alu -12 301 3 3319 224 80 30 chr5 125105154 125106016 -77979516 + L1M4 LINE L1 2812 3749 -2397 1037 206 93 35 chr5 125106023 125106167 -77979365 + MER2 DNA MER2_type 10 144 -201 1762 186 39 0 chr5 125106167 125106501 -77979031 - MER7A DNA MER2_type -1 345 1 1037 206 93 35 chr5 125106501 125106666 -77978866 + MER2 DNA MER2_type 144 337 -8 661 205 33 47 chr5 125106676 125106891 -77978641 + L1M4 LINE L1 3746 3957 -2189 892 265 82 23 chr5 125107048 125107354 -77978178 + MLT1E LTR MaLR 244 567 -26 347 217 132 0 chr5 125107849 125107955 -77977577 - L1ME4a LINE L1 -28 6093 5974 3157 203 53 44 chr5 125108365 125109142 -77976390 - MER63C DNA MER1_type -184 876 108 2046 134 3 28 chr5 125109142 125109462 -77976070 - AluSx SINE Alu 0 312 1 3157 203 53 44 chr5 125109462 125109510 -77976022 - MER63C DNA MER1_type -952 108 62 360 59 0 0 chr5 125109510 125109561 -77975971 + (TG)n Simple_repeat Simple_repeat 2 52 0 3157 203 53 44 chr5 125109561 125109602 -77975930 - MER63C DNA MER1_type -998 62 1 2222 202 80 7 chr5 125110010 125110559 -77974973 - L1ME1 LINE L1 -1 6165 5577 1731 227 46 36 chr5 125110572 125111132 -77974400 - L1ME1 LINE L1 -745 5401 4836 234 0 0 0 chr5 125112455 125112481 -77973051 + (TG)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr5 125112595 125112615 -77972917 + (TG)n Simple_repeat Simple_repeat 2 21 0 1207 228 101 98 chr5 125112680 125113444 -77972088 - LTR41 LTR ERVL -7 766 1 303 267 75 0 chr5 125116571 125116691 -77968841 + L1M4 LINE L1 3324 3452 -2694 363 248 152 10 chr5 125116711 125116909 -77968623 + L1M4 LINE L1 3830 4055 -2091 346 294 115 8 chr5 125116974 125117209 -77968323 + L1M4 LINE L1 4175 4434 -1712 270 305 21 21 chr5 125117215 125117356 -77968176 + L1M4 LINE L1 4464 4604 -1542 761 159 63 16 chr5 125117474 125117663 -77967869 + L1MD3 LINE L1 7798 7995 0 241 281 50 8 chr5 125117784 125117905 -77967627 + L1P LINE L1 4902 5027 -1119 2362 105 0 3 chr5 125118483 125118796 -77966736 + AluSx SINE Alu 1 312 0 415 314 60 58 chr5 125118905 125118962 -77966570 + L1M4 LINE L1 3428 3483 -2663 2307 85 3 13 chr5 125118962 125119267 -77966265 + AluSc SINE Alu 1 302 -7 415 314 60 58 chr5 125119267 125119712 -77965820 + L1M4 LINE L1 3483 3931 -2215 671 170 170 48 chr5 125119756 125119903 -77965629 - AluJb SINE Alu -18 294 130 1238 141 217 12 chr5 125119913 125120162 -77965370 - AluJb SINE Alu -12 300 1 29 60 0 0 chr5 125121152 125121202 -77964330 + AT_rich Low_complexity Low_complexity 1 50 0 600 301 65 9 chr5 125122808 125123024 -77962508 - MIR SINE MIR -15 247 20 192 152 0 0 chr5 125123568 125123601 -77961931 + CT-rich Low_complexity Low_complexity 2 34 0 241 176 39 39 chr5 125123759 125123810 -77961722 + AluSp SINE Alu 136 186 -117 363 275 114 42 chr5 125124633 125124800 -77960732 + MIR SINE MIR 82 260 -2 316 267 0 0 chr5 125125431 125125535 -77959997 - MIR SINE MIR -88 120 50 301 291 55 42 chr5 125126689 125126854 -77958678 + MIR SINE MIR 92 258 -4 242 313 0 30 chr5 125127278 125127377 -77958155 + MARNA DNA Mariner 399 494 -92 2105 123 3 13 chr5 125127634 125127950 -77957582 - AluSq SINE Alu 0 313 1 395 61 61 0 chr5 125127954 125128020 -77957512 - L1MA7 LINE L1 -1 6290 6221 366 182 0 0 chr5 125128020 125128086 -77957446 + MER5B DNA MER1_type 113 178 0 464 264 129 7 chr5 125128100 125128255 -77957277 - MER5A DNA MER1_type -6 183 10 246 246 98 0 chr5 125128469 125128530 -77957002 + LTR8 LTR ERV1 2 68 -623 369 169 0 0 chr5 125128591 125128650 -77956882 + LTR8A LTR ERV1 287 345 -382 1016 157 13 6 chr5 125128750 125128909 -77956623 + AluJb SINE Alu 141 300 -12 2237 125 0 0 chr5 125129000 125129305 -77956227 + AluSx SINE Alu 1 305 -7 350 101 0 87 chr5 125129322 125129391 -77956141 + FLAM_A SINE Alu 71 133 0 363 73 0 18 chr5 125129392 125129447 -77956085 - L1PA15 LINE L1 -9 6156 6103 1271 150 44 114 chr5 125129453 125129813 -77955719 - Charlie1b DNA MER1_type -133 390 56 260 133 0 44 chr5 125130331 125130376 -77955156 + MLT1C LTR MaLR 425 467 0 1867 145 35 0 chr5 125130556 125130845 -77954687 - AluSx SINE Alu -13 299 1 386 269 69 8 chr5 125130856 125130986 -77954546 - MIR SINE MIR -73 189 52 259 266 64 0 chr5 125131139 125131233 -77954299 + Charlie7 DNA MER1_type 1 100 -2512 2208 167 71 52 chr5 125131411 125131907 -77953625 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 125132042 125132063 -77953469 + AT_rich Low_complexity Low_complexity 1 21 0 297 327 10 0 chr5 125132409 125132513 -77953019 + MIR3 SINE MIR 78 182 -26 5319 89 32 12 chr5 125133457 125134206 -77951326 - SVA Other Other -2 1384 621 875 209 205 0 chr5 125134324 125134582 -77950950 + L2 LINE L2 1000 1310 -2004 623 206 30 15 chr5 125134597 125134728 -77950804 + MER58B DNA MER1_type 195 327 -14 4092 245 68 40 chr5 125134739 125136268 -77949264 + L2 LINE L2 1301 2871 -443 1392 169 47 47 chr5 125136347 125136648 -77948884 - AluJb SINE Alu -8 304 4 395 265 63 67 chr5 125136697 125136965 -77948567 + L2 LINE L2 3047 3313 0 1071 151 39 44 chr5 125140403 125140608 -77944924 - AluJo SINE Alu -22 290 87 648 191 0 44 chr5 125140706 125140790 -77944742 + FLAM_A SINE Alu 1 78 -233 2357 125 8 40 chr5 125140790 125141166 -77944366 + THE1B LTR MaLR 1 364 0 648 191 0 44 chr5 125141166 125141217 -77944315 + FLAM_A SINE Alu 78 130 -181 309 261 80 43 chr5 125141244 125141432 -77944100 + L1M4 LINE L1 2200 2394 -3752 31 0 0 0 chr5 125141523 125141554 -77943978 + AT_rich Low_complexity Low_complexity 1 31 0 1444 171 17 60 chr5 125141678 125141796 -77943736 + AluJb SINE Alu 14 136 -176 2340 98 0 0 chr5 125141796 125142093 -77943439 - AluSx SINE Alu -15 297 1 1444 171 17 60 chr5 125142093 125142272 -77943260 + AluJb SINE Alu 136 298 -14 1821 162 0 39 chr5 125142336 125142644 -77942888 - AluJb SINE Alu -16 296 1 361 261 72 22 chr5 125142707 125142845 -77942687 + MIR SINE MIR 3 147 -115 345 223 43 32 chr5 125142916 125143010 -77942522 + LTR40a LTR ERVL 410 504 -15 2296 118 0 0 chr5 125143035 125143339 -77942193 - AluSx SINE Alu -8 304 1 384 190 293 5 chr5 125143339 125143544 -77941988 - MER20B DNA MER1_type -39 744 481 258 333 37 0 chr5 125143884 125144019 -77941513 + GA-rich Low_complexity Low_complexity 4 143 0 213 39 0 0 chr5 125145061 125145087 -77940445 + (A)n Simple_repeat Simple_repeat 1 26 0 2187 125 0 0 chr5 125145094 125145382 -77940150 + AluSx SINE Alu 1 288 -24 2149 98 19 13 chr5 125146075 125146382 -77939150 - AluSc SINE Alu 0 309 1 2330 89 0 7 chr5 125146923 125147225 -77938307 + AluSc SINE Alu 1 300 -9 2086 113 6 29 chr5 125148209 125148520 -77937012 + AluSq SINE Alu 6 309 -4 2197 85 18 0 chr5 125148620 125148902 -77936630 + AluSg SINE Alu 1 287 -23 476 246 151 44 chr5 125148947 125149199 -77936333 + L1ME4a LINE L1 5688 5966 -155 396 0 0 0 chr5 125149318 125149362 -77936170 + (CA)n Simple_repeat Simple_repeat 1 44 0 298 268 71 9 chr5 125149362 125149474 -77936058 + L2 LINE L2 3195 3313 0 2238 118 0 0 chr5 125149743 125150047 -77935485 + AluSx SINE Alu 1 304 -8 1061 157 35 0 chr5 125151049 125151221 -77934311 - AluJo SINE Alu -16 296 119 710 194 0 22 chr5 125151265 125151399 -77934133 - AluJo SINE Alu -169 143 13 411 250 142 107 chr5 125151477 125151737 -77933795 - L1MC/D LINE L1 -321 5800 5550 1188 168 59 0 chr5 125151737 125151957 -77933575 - MER46A DNA MER2_type -3 233 1 411 250 142 107 chr5 125151957 125152172 -77933360 - L1MC/D LINE L1 -571 5550 5292 330 320 104 31 chr5 125152182 125152404 -77933128 - L1MC/D LINE L1 -873 5273 5036 2065 126 7 10 chr5 125152803 125153104 -77932428 - AluSx SINE Alu -12 300 1 2125 121 0 10 chr5 125153394 125153691 -77931841 + AluSx SINE Alu 3 296 -16 1577 100 0 0 chr5 125153751 125153951 -77931581 + AluSg/x SINE Alu 104 303 -7 449 182 0 0 chr5 125154098 125154175 -77931357 + FRAM/FAM SINE Alu 1 69 -107 340 84 6 0 chr5 125154178 125154233 -77931299 - Alu SINE Alu 0 308 259 1570 74 28 0 chr5 125155338 125155554 -77929978 + L1PB1 LINE L1 5929 6150 -1 1579 164 27 4 chr5 125155808 125156064 -77929468 - AluJo SINE Alu -17 295 34 24 32 0 0 chr5 125156345 125156376 -77929156 + AT_rich Low_complexity Low_complexity 1 31 0 491 245 125 0 chr5 125156572 125156756 -77928776 + MER112 DNA MER1_type 1 207 -53 2417 84 0 0 chr5 125157223 125157522 -77928010 + AluSq SINE Alu 1 299 -14 2417 72 7 0 chr5 125157668 125157961 -77927571 - AluSp SINE Alu -18 295 1 523 144 119 51 chr5 125159412 125159530 -77926002 + FLAM_C SINE Alu 2 127 -16 2515 73 3 0 chr5 125160222 125160523 -77925009 + AluSq SINE Alu 6 307 -6 2177 99 0 7 chr5 125160533 125160827 -77924705 + AluSx SINE Alu 1 292 -20 194 306 12 12 chr5 125160870 125160955 -77924577 + MIR SINE MIR 28 112 -150 1891 153 0 20 chr5 125162588 125162601 -77922931 - AluJb SINE Alu -22 290 278 198 0 0 0 chr5 125162601 125162623 -77922909 + (ATTG)n Simple_repeat Simple_repeat 4 25 0 1891 153 0 20 chr5 125162623 125162903 -77922629 - AluJb SINE Alu -34 278 3 377 301 86 21 chr5 125163147 125163333 -77922199 - MIR SINE MIR -64 198 1 200 274 78 0 chr5 125163371 125163422 -77922110 + L2 LINE L2 3251 3305 -8 226 294 0 54 chr5 125163640 125163732 -77921800 + MER5A DNA MER1_type 18 104 -85 229 326 42 0 chr5 125164578 125164673 -77920859 - MIR3 SINE MIR 0 208 110 23 33 0 0 chr5 125164680 125164710 -77920822 + AT_rich Low_complexity Low_complexity 1 30 0 349 211 177 0 chr5 125164744 125164852 -77920680 + L1ME4a LINE L1 5755 5885 -236 1238 121 11 0 chr5 125165073 125165255 -77920277 - AluSq SINE Alu -1 312 129 360 66 6 0 chr5 125165405 125165460 -77920072 - Alu SINE Alu 0 308 259 1652 74 28 0 chr5 125166565 125166781 -77918751 + L1PB1 LINE L1 5929 6150 -1 1569 164 27 4 chr5 125167035 125167291 -77918241 - AluJo SINE Alu -17 295 34 24 32 0 0 chr5 125167572 125167603 -77917929 + AT_rich Low_complexity Low_complexity 1 31 0 514 238 124 5 chr5 125167799 125167984 -77917548 + MER112 DNA MER1_type 1 207 -53 2448 90 0 0 chr5 125168451 125168763 -77916769 + AluSx SINE Alu 1 312 0 1214 162 10 25 chr5 125168798 125168811 -77916721 - AluJb SINE Alu -22 290 278 198 0 0 0 chr5 125168811 125168833 -77916699 + (ATTG)n Simple_repeat Simple_repeat 4 25 0 1214 162 10 25 chr5 125168833 125169023 -77916509 - AluJb SINE Alu -34 278 90 1061 144 39 58 chr5 125171521 125171729 -77913803 - AluJo SINE Alu -22 290 87 694 191 0 44 chr5 125171827 125171911 -77913621 + FLAM_A SINE Alu 1 78 -233 2497 125 8 40 chr5 125171911 125172287 -77913245 + THE1B LTR MaLR 1 364 0 694 191 0 44 chr5 125172287 125172338 -77913194 + FLAM_A SINE Alu 78 130 -181 355 255 80 43 chr5 125172365 125172553 -77912979 + L1M4 LINE L1 2200 2394 -3752 31 0 0 0 chr5 125172644 125172675 -77912857 + AT_rich Low_complexity Low_complexity 1 31 0 1400 171 17 63 chr5 125172799 125172918 -77912614 + AluJb SINE Alu 14 137 -175 2330 97 0 0 chr5 125172918 125173216 -77912316 - AluSx SINE Alu -14 298 1 1400 171 17 63 chr5 125173216 125173395 -77912137 + AluJb SINE Alu 137 298 -14 1816 160 0 39 chr5 125173459 125173766 -77911766 - AluJb SINE Alu -17 295 1 405 261 72 22 chr5 125173829 125173967 -77911565 + MIR SINE MIR 3 147 -115 333 234 43 32 chr5 125174038 125174132 -77911400 + LTR40a LTR ERVL 410 504 -15 2283 118 0 0 chr5 125174157 125174461 -77911071 - AluSx SINE Alu -8 304 1 421 186 299 5 chr5 125174461 125174665 -77910867 - MER20B DNA MER1_type -39 744 481 258 333 37 0 chr5 125175005 125175140 -77910392 + GA-rich Low_complexity Low_complexity 4 143 0 2171 125 0 0 chr5 125176208 125176496 -77909036 + AluSx SINE Alu 1 288 -24 2065 108 19 13 chr5 125177188 125177495 -77908037 - AluSc SINE Alu 0 309 1 2315 89 0 7 chr5 125178036 125178339 -77907193 + AluSc SINE Alu 1 301 -8 2044 116 6 29 chr5 125179328 125179639 -77905893 + AluSq SINE Alu 6 309 -4 2174 85 18 0 chr5 125179739 125180021 -77905511 + AluSg SINE Alu 1 287 -23 498 246 151 44 chr5 125180066 125180318 -77905214 + L1ME4a LINE L1 5688 5966 -155 297 0 0 0 chr5 125180436 125180469 -77905063 + (CA)n Simple_repeat Simple_repeat 2 34 0 331 268 71 9 chr5 125180469 125180581 -77904951 + L2 LINE L2 3195 3313 0 2229 115 0 0 chr5 125180850 125181154 -77904378 + AluSx SINE Alu 1 304 -8 1077 156 0 0 chr5 125182156 125182316 -77903216 - AluJo SINE Alu -16 296 137 758 203 0 22 chr5 125182371 125182509 -77903023 - AluJo SINE Alu -169 143 9 454 249 141 109 chr5 125182583 125182844 -77902688 - L1MC/D LINE L1 -321 5800 5549 1265 168 59 0 chr5 125182844 125183064 -77902468 - MER46A DNA MER2_type -3 233 1 454 249 141 109 chr5 125183064 125183279 -77902253 - L1MC/D LINE L1 -572 5549 5292 358 315 104 31 chr5 125183289 125183511 -77902021 - L1MC/D LINE L1 -873 5273 5036 2043 126 7 10 chr5 125183910 125184211 -77901321 - AluSx SINE Alu -12 300 1 317 289 8 39 chr5 125184323 125184451 -77901081 + L1MDa LINE L1 1258 1381 -5159 2118 121 0 10 chr5 125184501 125184799 -77900733 + AluSx SINE Alu 3 297 -15 1570 100 0 0 chr5 125184859 125185059 -77900473 + AluSg/x SINE Alu 104 303 -7 473 182 0 0 chr5 125185206 125185283 -77900249 + FRAM/FAM SINE Alu 1 69 -107 340 80 0 0 chr5 125185285 125185335 -77900197 - AluJb SINE Alu 0 308 259 1652 74 28 0 chr5 125186443 125186659 -77898873 + L1PB1 LINE L1 5929 6150 -1 1569 164 27 4 chr5 125186913 125187169 -77898363 - AluJo SINE Alu -17 295 34 24 32 0 0 chr5 125187450 125187481 -77898051 + AT_rich Low_complexity Low_complexity 1 31 0 514 238 124 5 chr5 125187677 125187862 -77897670 + MER112 DNA MER1_type 1 207 -53 2448 90 0 0 chr5 125188329 125188641 -77896891 + AluSx SINE Alu 1 312 0 216 0 0 0 chr5 125188692 125188716 -77896816 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1864 154 0 7 chr5 125188716 125188996 -77896536 - AluJb SINE Alu -32 280 3 431 317 81 16 chr5 125189240 125189426 -77896106 - MIR SINE MIR -64 198 1 223 273 73 0 chr5 125189464 125189519 -77896013 + L2 LINE L2 3251 3309 -4 258 303 0 50 chr5 125189733 125189832 -77895700 + MER5A DNA MER1_type 18 111 -78 229 326 42 0 chr5 125190671 125190766 -77894766 - MIR3 SINE MIR 0 208 110 23 33 0 0 chr5 125190773 125190803 -77894729 + AT_rich Low_complexity Low_complexity 1 30 0 332 219 177 0 chr5 125190837 125190945 -77894587 + L1ME4a LINE L1 5755 5885 -236 2337 96 6 6 chr5 125191162 125191475 -77894057 - AluSq SINE Alu 0 313 1 2147 65 3 96 chr5 125191605 125191927 -77893605 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 125191936 125191957 -77893575 + AT_rich Low_complexity Low_complexity 1 21 0 718 254 87 0 chr5 125192233 125192418 -77893114 + MIR SINE MIR 58 258 -4 1234 155 0 48 chr5 125193032 125193096 -77892436 + L1MC1 LINE L1 6137 6203 -130 2254 113 3 0 chr5 125193096 125193398 -77892134 + AluSx SINE Alu 1 303 -9 1234 155 0 48 chr5 125193398 125193540 -77891992 + L1MC1 LINE L1 6203 6333 0 332 216 14 0 chr5 125193659 125193733 -77891799 + L2 LINE L2 2197 2271 -1043 743 241 19 91 chr5 125193856 125194163 -77891369 + MLT1L LTR MaLR 3 287 -328 313 266 189 14 chr5 125195131 125195274 -77890258 - MIR SINE MIR -5 257 90 2074 112 44 0 chr5 125196105 125196401 -77889131 + AluSq SINE Alu 1 309 -4 408 62 31 52 chr5 125196404 125196501 -77889031 + (GAAA)n Simple_repeat Simple_repeat 4 98 0 799 122 0 46 chr5 125196506 125196637 -77888895 + AluJb SINE Alu 184 308 -4 260 276 43 43 chr5 125196857 125196973 -77888559 + MIR3 SINE MIR 85 200 -8 219 36 0 0 chr5 125196982 125197010 -77888522 + (TG)n Simple_repeat Simple_repeat 1 28 0 1304 147 58 18 chr5 125197012 125197236 -77888296 + AluJb SINE Alu 70 302 -10 623 115 11 0 chr5 125197236 125197323 -77888209 - AluSg/x SINE Alu -53 259 172 1264 175 92 4 chr5 125197332 125197561 -77887971 - AluJb SINE Alu -23 289 41 23 33 0 0 chr5 125198939 125198969 -77886563 + AT_rich Low_complexity Low_complexity 1 30 0 967 251 18 4 chr5 125199784 125200011 -77885521 + MIR SINE MIR 3 232 -30 511 207 0 0 chr5 125200200 125200287 -77885245 - AluJ/FLAM SINE Alu -224 88 2 327 199 122 53 chr5 125200358 125200489 -77885043 + MIR3 SINE MIR 53 192 -16 1508 161 60 4 chr5 125200815 125201082 -77884450 + L1MB7 LINE L1 5886 6167 -17 300 269 186 20 chr5 125201676 125201929 -77883603 + L2 LINE L2 2678 2972 -342 223 394 66 0 chr5 125202009 125202146 -77883386 + L2 LINE L2 3167 3312 -1 2238 158 5 42 chr5 125202225 125202337 -77883195 + MLT1A1 LTR MaLR 1 116 -249 1953 124 0 63 chr5 125202337 125202652 -77882880 + AluSx SINE Alu 1 295 -17 2238 158 5 42 chr5 125202652 125202918 -77882614 + MLT1A1 LTR MaLR 116 365 0 21 57 0 0 chr5 125204800 125204835 -77880697 + GC_rich Low_complexity Low_complexity 1 35 0 33 43 0 0 chr5 125205385 125205432 -77880100 + GC_rich Low_complexity Low_complexity 1 47 0 916 269 144 55 chr5 125206506 125206775 -77878757 + L2 LINE L2 2637 2880 -433 936 181 8 129 chr5 125206775 125207023 -77878509 + MER20 DNA MER1_type 1 218 -1 916 269 144 55 chr5 125207023 125207186 -77878346 + L2 LINE L2 2880 3027 -286 1684 147 39 14 chr5 125207186 125207471 -77878061 - AluJb SINE Alu -12 300 9 916 269 144 55 chr5 125207471 125207639 -77877893 + L2 LINE L2 3027 3313 0 456 260 150 17 chr5 125207660 125207833 -77877699 - MIR SINE MIR -32 230 35 1983 147 9 129 chr5 125207846 125208028 -77877504 + MLT1B LTR MaLR 1 203 -187 2288 90 3 0 chr5 125208028 125208318 -77877214 + AluY SINE Alu 1 291 -20 1983 147 9 129 chr5 125208318 125208511 -77877021 + MLT1B LTR MaLR 203 318 -72 1839 184 0 0 chr5 125208511 125208816 -77876716 - AluSx SINE Alu -7 305 1 1983 147 9 129 chr5 125208816 125208882 -77876650 + MLT1B LTR MaLR 318 390 0 2112 113 10 3 chr5 125209009 125209300 -77876232 - AluSx SINE Alu -14 298 6 1907 163 10 3 chr5 125209308 125209614 -77875918 - AluJb SINE Alu -4 308 1 25 0 0 0 chr5 125209628 125209653 -77875879 + AT_rich Low_complexity Low_complexity 1 25 0 888 232 0 12 chr5 125209805 125209973 -77875559 - FRAM SINE Alu 0 166 1 945 257 29 21 chr5 125210074 125210315 -77875217 + MIR SINE MIR 2 244 -18 2068 155 0 0 chr5 125210352 125210662 -77874870 - AluJb SINE Alu -2 310 1 182 300 133 0 chr5 125210839 125210899 -77874633 - L2 LINE L2 0 3272 3205 1960 102 0 29 chr5 125210977 125211251 -77874281 - AluY SINE Alu -45 266 1 2312 88 0 3 chr5 125212038 125212343 -77873189 + AluY SINE Alu 2 305 -6 1201 193 167 7 chr5 125212696 125212965 -77872567 + AluJb SINE Alu 1 312 0 1584 167 51 126 chr5 125212984 125213389 -77872143 - MLT1D LTR MaLR 0 505 150 2371 87 0 26 chr5 125213389 125213698 -77871834 - AluSg SINE Alu -9 301 1 1584 167 51 126 chr5 125213698 125213838 -77871694 - MLT1D LTR MaLR -355 150 1 630 214 102 47 chr5 125213953 125214168 -77871364 + MIR SINE MIR 6 232 -30 279 122 0 0 chr5 125215149 125215190 -77870342 + U2 snRNA snRNA 1 41 -147 2064 137 3 3 chr5 125215233 125215533 -77869999 - AluSx SINE Alu -12 300 1 279 0 0 0 chr5 125216368 125216399 -77869133 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 325 235 128 10 chr5 125216399 125216492 -77869040 - L2 LINE L2 -9 3304 3197 2580 134 13 11 chr5 125217141 125217515 -77868017 - THE1C LTR MaLR 0 375 1 2166 120 0 3 chr5 125218060 125218352 -77867180 - AluSg SINE Alu -19 291 1 224 350 0 0 chr5 125218614 125218674 -77866858 - L2 LINE L2 0 3272 3213 1656 170 57 0 chr5 125218684 125218966 -77866566 - AluSx SINE Alu -14 298 1 2055 128 0 20 chr5 125219052 125219356 -77866176 - AluSx SINE Alu -14 298 1 1087 178 74 151 chr5 125219693 125219762 -77865770 + MLT1A2 LTR MaLR 1 74 -300 2427 82 3 13 chr5 125219762 125220077 -77865455 + AluSp SINE Alu 1 312 -1 1087 178 74 151 chr5 125220077 125220412 -77865120 + MLT1A2 LTR MaLR 74 374 0 309 218 68 13 chr5 125220774 125220917 -77864615 + L1ME LINE L1 5669 5823 -298 2883 16 0 6 chr5 125220950 125221270 -77864262 + AluYb8 SINE Alu 1 318 0 1310 158 0 9 chr5 125221429 125221644 -77863888 + AluJb SINE Alu 87 299 -13 2203 91 18 0 chr5 125221667 125221953 -77863579 - AluSp SINE Alu -22 291 1 1329 90 0 0 chr5 125222060 125222226 -77863306 - AluSg/x SINE Alu -28 281 116 319 97 3 3 chr5 125222227 125222282 -77863250 - Alu SINE Alu -256 47 2 204 40 0 0 chr5 125222298 125222323 -77863209 + (CA)n Simple_repeat Simple_repeat 1 25 0 1251 119 5 0 chr5 125222352 125222537 -77862995 - AluSg/x SINE Alu -8 301 116 377 43 0 0 chr5 125222539 125222586 -77862946 - AluY SINE Alu -254 47 1 21 0 0 0 chr5 125222622 125222643 -77862889 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 125222681 125222703 -77862829 + AT_rich Low_complexity Low_complexity 1 22 0 2120 77 0 0 chr5 125222705 125222966 -77862566 + AluY SINE Alu 43 303 -8 2066 137 0 0 chr5 125223099 125223377 -77862155 - AluJb SINE Alu -34 278 1 221 266 8 28 chr5 125224386 125224476 -77861056 + CT-rich Low_complexity Low_complexity 1 88 0 303 218 158 0 chr5 125224615 125224716 -77860816 + L2 LINE L2 3133 3249 -64 766 224 118 45 chr5 125224902 125225233 -77860299 - L1MC5 LINE L1 -433 7528 7174 2156 121 3 7 chr5 125225526 125225832 -77859700 + AluSq SINE Alu 1 305 -8 2114 114 0 0 chr5 125226383 125226663 -77858869 - AluSx SINE Alu -21 291 12 1921 181 0 0 chr5 125226732 125227042 -77858490 + AluJb SINE Alu 1 310 -2 1486 127 13 9 chr5 125227056 125227285 -77858247 + L1MA2 LINE L1 1004 1233 -6332 186 0 88 0 chr5 125227286 125227320 -77858212 + T-rich Low_complexity Low_complexity 1 37 0 2099 63 4 0 chr5 125227326 125227581 -77857951 - AluY SINE Alu -55 256 1 2017 134 0 0 chr5 125227593 125227908 -77857624 - AluSx SINE Alu 0 315 1 964 124 0 0 chr5 125227915 125228044 -77857488 - AluSq/x SINE Alu -184 129 1 7727 139 43 48 chr5 125228044 125229903 -77855629 + L1MA2 LINE L1 5312 7179 -544 250 186 136 0 chr5 125229903 125229962 -77855570 + MER67C LTR ERV1 499 565 -145 7727 139 43 48 chr5 125229962 125230072 -77855460 + L1MA2 LINE L1 7179 7288 -435 2081 119 7 0 chr5 125230072 125230350 -77855182 + AluSx SINE Alu 1 280 -32 7727 139 43 48 chr5 125230350 125230743 -77854789 + L1MA2 LINE L1 7288 7722 -1 763 284 68 17 chr5 125231074 125231437 -77854095 + L1MC4a LINE L1 5499 5768 -394 38 39 0 0 chr5 125231500 125231552 -77853980 + AT_rich Low_complexity Low_complexity 1 52 0 2232 123 0 0 chr5 125231913 125232215 -77853317 + AluSx SINE Alu 1 302 -10 1710 130 59 0 chr5 125232515 125232754 -77852778 + AluJb SINE Alu 1 253 -59 1002 104 0 22 chr5 125233463 125233598 -77851934 - FLAM_C SINE Alu -1 132 1 332 280 148 11 chr5 125233600 125233782 -77851750 + L1ME LINE L1 5585 5791 -330 2361 75 0 0 chr5 125233788 125234081 -77851451 - AluY SINE Alu -18 293 1 1893 131 49 26 chr5 125234089 125234394 -77851138 - AluSx SINE Alu 0 312 1 1855 165 3 19 chr5 125234450 125234765 -77850767 - AluJb SINE Alu 0 312 3 536 252 216 42 chr5 125234768 125235101 -77850431 + MLT1I LTR MaLR 18 408 -1 592 97 45 28 chr5 125235136 125235312 -77850220 + (TA)n Simple_repeat Simple_repeat 2 180 0 1983 198 50 45 chr5 125235355 125235549 -77849983 + L1MC4 LINE L1 7524 7715 -327 2234 116 0 0 chr5 125235549 125235841 -77849691 + AluSc SINE Alu 1 292 -17 1983 198 50 45 chr5 125235841 125236161 -77849371 + L1MC4 LINE L1 7715 8041 -1 406 184 0 0 chr5 125236337 125236413 -77849119 + MLT1F LTR MaLR 467 542 0 322 351 26 26 chr5 125236689 125236880 -77848652 + L1MEd LINE L1 1037 1227 -4892 1675 188 0 3 chr5 125236910 125237213 -77848319 - AluJb SINE Alu 0 302 1 10608 24 3 156 chr5 125237255 125238872 -77846660 + SVA Other Other 8 1377 -9 291 338 23 23 chr5 125238917 125239136 -77846396 + HAL1b LINE L1 309 527 -821 470 221 49 8 chr5 125239229 125239351 -77846181 - LTR68 LTR ERV1 -606 134 8 486 304 59 69 chr5 125239516 125239561 -77845971 + L1MC4a LINE L1 5555 5599 -2209 2047 154 0 0 chr5 125239561 125239872 -77845660 - AluSx SINE Alu -1 311 1 486 304 59 69 chr5 125239872 125240217 -77845315 + L1MC4a LINE L1 5599 5941 -1867 657 82 0 0 chr5 125240893 125240978 -77844554 + AluY SINE Alu 213 297 -14 502 206 17 109 chr5 125242105 125242280 -77843252 - MLT1K LTR MaLR 0 588 430 645 257 23 37 chr5 125242330 125242544 -77842988 - MLT1K LTR MaLR -152 436 226 466 118 29 0 chr5 125242551 125242619 -77842913 - AluS SINE Alu -11 300 231 1617 81 0 19 chr5 125242648 125242887 -77842645 - AluSg/x SINE Alu 0 308 74 1972 136 31 0 chr5 125242891 125243185 -77842347 - AluSx SINE Alu -9 303 1 558 239 56 56 chr5 125243949 125244129 -77841403 - MLT1J LTR MaLR 0 511 332 297 293 40 47 chr5 125244162 125244312 -77841220 - MLT1J LTR MaLR -263 248 100 905 154 53 75 chr5 125244747 125244974 -77840558 + L1MD1 LINE L1 6021 6242 0 707 146 139 0 chr5 125244988 125245125 -77840407 - FAM SINE Alu -19 166 11 249 194 0 148 chr5 125245176 125245212 -77840320 - AluJo/FRAM SINE Alu 0 302 262 2220 102 0 26 chr5 125245212 125245517 -77840015 + AluSx SINE Alu 1 297 -15 249 194 0 148 chr5 125245517 125245588 -77839944 - AluJo/FRAM SINE Alu -40 262 211 339 239 60 8 chr5 125245809 125245926 -77839606 - L1MC5 LINE L1 -107 7854 7732 2161 165 26 93 chr5 125246110 125246581 -77838951 + MLT1D LTR MaLR 1 433 -72 2131 122 7 3 chr5 125246581 125246876 -77838656 - AluSx SINE Alu -16 296 1 2161 165 26 93 chr5 125246876 125246942 -77838590 + MLT1D LTR MaLR 433 502 -3 2217 126 7 0 chr5 125247555 125247864 -77837668 + AluSx SINE Alu 1 311 -1 2321 100 0 0 chr5 125248117 125248416 -77837116 - AluSg SINE Alu -11 299 1 220 219 44 26 chr5 125248588 125248702 -77836830 + (TA)n Simple_repeat Simple_repeat 1 116 0 1526 191 14 3 chr5 125248835 125249123 -77836409 - AluJo SINE Alu -21 291 1 484 322 156 24 chr5 125249236 125249440 -77836092 - L2 LINE L2 0 3313 3137 1772 138 33 11 chr5 125249440 125249746 -77835786 - AluSx SINE Alu 0 312 1 484 322 156 24 chr5 125249746 125250076 -77835456 - L2 LINE L2 -176 3137 2705 416 154 187 130 chr5 125250080 125250203 -77835329 - FLAM_A SINE Alu 0 133 4 1758 163 6 49 chr5 125250235 125250373 -77835159 + AluJo SINE Alu 1 143 -169 1942 131 0 70 chr5 125250373 125250702 -77834830 + AluSq SINE Alu 5 310 -3 1758 163 6 49 chr5 125250702 125250888 -77834644 + AluJo SINE Alu 143 311 -1 1226 208 0 56 chr5 125250898 125251182 -77834350 - AluJo SINE Alu -44 268 1 972 279 7 17 chr5 125251183 125251481 -77834051 - L2 LINE L2 -618 2696 2402 2153 209 120 58 chr5 125251570 125251727 -77833805 + MER76 LTR ERV 1 147 -541 2041 161 45 9 chr5 125251727 125252063 -77833469 + MER7A DNA MER2_type 1 346 0 2153 209 120 58 chr5 125252063 125252136 -77833396 + MER76 LTR ERV 147 214 -474 1912 159 0 7 chr5 125252136 125252438 -77833094 - AluJb SINE Alu -12 300 1 2153 209 120 58 chr5 125252438 125252832 -77832700 + MER76 LTR ERV 214 665 -23 4620 160 47 91 chr5 125253272 125253378 -77832154 - MER45B DNA AcHobo -541 1040 931 439 226 137 0 chr5 125253378 125253480 -77832052 + FLAM_C SINE Alu 2 117 -16 4620 160 47 91 chr5 125253480 125253688 -77831844 - MER45B DNA AcHobo -650 931 715 2356 110 3 0 chr5 125253688 125253996 -77831536 - AluSc SINE Alu 0 309 1 4620 160 47 91 chr5 125253996 125254768 -77830764 - MER45B DNA AcHobo -866 715 1 663 289 177 25 chr5 125254884 125255206 -77830326 - MLT1J2 LTR MaLR -56 394 24 2958 80 8 3 chr5 125255207 125255569 -77829963 + THE1B LTR MaLR 1 364 0 2219 97 0 0 chr5 125255797 125256087 -77829445 - AluY SINE Alu -2 309 20 1409 158 92 26 chr5 125256383 125256655 -77828877 + AluJo SINE Alu 1 290 -22 2338 134 110 10 chr5 125256843 125257253 -77828279 - LTR32 LTR ERVL -13 458 8 1885 223 61 7 chr5 125257787 125258196 -77827336 + LTR16C LTR ERVL 60 490 -1 1202 227 133 60 chr5 125258286 125258789 -77826743 + HAL1 LINE L1 649 1188 -1319 2306 94 0 0 chr5 125261039 125261346 -77824186 - AluSg1 SINE Alu -2 307 1 375 305 75 28 chr5 125261348 125261561 -77823971 - MIR SINE MIR -20 242 20 229 253 103 72 chr5 125263761 125263955 -77821577 - HAL1 LINE L1 -16 2491 2292 1344 169 93 43 chr5 125264101 125264380 -77821152 - AluJo SINE Alu -19 293 1 2003 111 24 7 chr5 125264842 125265139 -77820393 - AluSq SINE Alu -11 302 1 453 298 126 11 chr5 125265366 125265628 -77819904 - HAL1 LINE L1 -607 1900 1609 348 242 286 0 chr5 125266494 125266585 -77818947 - FLAM_A SINE Alu -16 117 1 978 208 94 129 chr5 125266635 125267262 -77818270 + HAL1 LINE L1 1305 1927 -580 26 30 0 0 chr5 125267742 125267775 -77817757 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr5 125267775 125267797 -77817735 + (TA)n Simple_repeat Simple_repeat 2 23 0 1052 169 29 6 chr5 125267797 125267969 -77817563 - AluJo SINE Alu -28 284 109 264 232 53 32 chr5 125268003 125268098 -77817434 - MARNA DNA Mariner -249 337 241 224 157 0 20 chr5 125269209 125269260 -77816272 + (TAA)n Simple_repeat Simple_repeat 1 50 0 1636 172 13 20 chr5 125269403 125269706 -77815826 - AluJo SINE Alu -9 303 3 1727 174 0 14 chr5 125269791 125270085 -77815447 + AluSx SINE Alu 5 294 -18 1622 152 7 71 chr5 125270543 125270840 -77814692 - AluSx SINE Alu -30 282 5 536 208 54 31 chr5 125270864 125270994 -77814538 - FLAM_A SINE Alu 0 133 1 2438 66 0 31 chr5 125271271 125271589 -77813943 + AluY SINE Alu 1 308 -3 385 266 156 36 chr5 125272283 125272475 -77813057 + MIR SINE MIR 41 255 -7 210 194 60 45 chr5 125272606 125272673 -77812859 - L2 LINE L2 -456 2858 2791 381 277 147 38 chr5 125272832 125273070 -77812462 - L2 LINE L2 -627 2687 2424 320 280 21 0 chr5 125273070 125273163 -77812369 + MIR SINE MIR 119 213 -49 511 296 0 0 chr5 125273281 125273413 -77812119 + MIR SINE MIR 19 150 -112 880 141 0 0 chr5 125273691 125273812 -77811720 - FLAM_C SINE Alu -22 121 1 350 140 0 0 chr5 125274997 125275054 -77810478 - AluS SINE Alu -243 57 1 2205 90 40 3 chr5 125276423 125276724 -77808808 + AluSp SINE Alu 1 312 -1 210 118 0 0 chr5 125276906 125276940 -77808592 + (TG)n Simple_repeat Simple_repeat 2 35 0 240 35 0 0 chr5 125277025 125277054 -77808478 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 620 186 0 0 chr5 125277065 125277167 -77808365 - AluJ/FLAM SINE Alu -210 102 1 190 236 164 0 chr5 125277167 125277222 -77808310 + MIR3 SINE MIR 116 179 -29 2055 160 0 0 chr5 125277230 125277542 -77807990 - AluJo SINE Alu 0 312 1 189 378 51 31 chr5 125277776 125277874 -77807658 + MIR SINE MIR 19 118 -90 978 203 123 52 chr5 125278870 125279219 -77806313 - MLT1A2 LTR MaLR 0 374 1 1220 156 42 4 chr5 125279898 125280331 -77805201 - LTR54 LTR ERV1 0 510 1 2430 86 0 16 chr5 125280668 125280983 -77804549 - AluSg SINE Alu 0 310 1 270 295 114 0 chr5 125281564 125281669 -77803863 + L2 LINE L2 3192 3308 -5 868 244 26 65 chr5 125281771 125282153 -77803379 - L1MC4 LINE L1 -91 7951 7585 2146 106 10 7 chr5 125282394 125282697 -77802835 - AluSp SINE Alu -9 304 1 1575 176 6 66 chr5 125282697 125282849 -77802683 - AluJb SINE Alu -12 300 175 2380 109 0 0 chr5 125282849 125283162 -77802370 + AluSq SINE Alu 1 313 0 1575 176 6 66 chr5 125283162 125283328 -77802204 - AluJb SINE Alu -137 175 1 586 139 0 0 chr5 125283350 125283436 -77802096 - AluJ/FLAM SINE Alu -224 88 3 273 29 0 0 chr5 125283470 125283504 -77802028 + (CA)n Simple_repeat Simple_repeat 2 35 0 2239 114 0 0 chr5 125285211 125285510 -77800022 + AluSx SINE Alu 1 299 -13 1693 180 7 10 chr5 125285588 125285893 -77799639 - AluJo SINE Alu -8 304 1 470 210 30 30 chr5 125286218 125286318 -77799214 - AluS SINE Alu -213 100 1 1005 170 0 0 chr5 125286493 125286652 -77798880 + AluJb SINE Alu 129 287 -25 551 221 132 7 chr5 125286790 125286926 -77798606 - L2 LINE L2 0 3313 3161 787 228 109 37 chr5 125287573 125287867 -77797665 - L1ME LINE L1 -388 5782 5468 29 0 0 0 chr5 125287880 125287909 -77797623 + AT_rich Low_complexity Low_complexity 1 29 0 2112 99 14 17 chr5 125287917 125288211 -77797321 + AluSq SINE Alu 1 293 -20 216 67 0 0 chr5 125288211 125288241 -77797291 + (TG)n Simple_repeat Simple_repeat 2 31 0 4095 140 84 43 chr5 125288241 125288924 -77796608 + L1MB4 LINE L1 5137 5879 -301 1592 157 73 17 chr5 125288924 125289211 -77796321 + AluJb SINE Alu 3 305 -7 4095 140 84 43 chr5 125289211 125289527 -77796005 + L1MB4 LINE L1 5879 6180 0 23 0 0 0 chr5 125289686 125289709 -77795823 + AT_rich Low_complexity Low_complexity 1 23 0 1871 145 24 17 chr5 125289922 125290211 -77795321 + AluSx SINE Alu 1 291 -21 1976 131 10 13 chr5 125290456 125290768 -77794764 - AluY SINE Alu 0 311 1 2182 88 3 14 chr5 125291921 125292216 -77793316 - AluSc SINE Alu -17 292 1 244 305 8 0 chr5 125292234 125292352 -77793180 + L1MC/D LINE L1 4540 4658 -1488 357 298 176 12 chr5 125292411 125292656 -77792876 + L1MC/D LINE L1 5332 5616 -2192 1050 229 96 18 chr5 125292987 125293106 -77792426 - AluJo SINE Alu 0 302 194 1808 161 3 45 chr5 125293106 125293417 -77792115 - AluJb SINE Alu -14 298 1 1050 229 96 18 chr5 125293417 125293577 -77791955 - AluJo SINE Alu -108 194 1 336 175 12 50 chr5 125294247 125294327 -77791205 + LTR49 LTR ERV1 447 523 -72 1273 184 22 11 chr5 125294773 125295044 -77790488 - L1 LINE L1 -987 5159 4886 1145 180 30 5 chr5 125295234 125295434 -77790098 + AluJo SINE Alu 85 289 -23 2309 116 0 0 chr5 125295703 125296013 -77789519 - AluSg SINE Alu 0 310 1 1775 68 5 0 chr5 125299912 125300132 -77785400 - AluSp SINE Alu -12 301 81 219 152 0 0 chr5 125300883 125300929 -77784603 + (TA)n Simple_repeat Simple_repeat 2 47 0 2127 92 40 20 chr5 125304170 125304474 -77781058 + AluSg SINE Alu 1 310 0 24 32 0 0 chr5 125307940 125307971 -77777561 + AT_rich Low_complexity Low_complexity 1 31 0 1734 102 128 8 chr5 125308417 125308682 -77776850 + AluSg1 SINE Alu 1 297 -12 999 177 192 15 chr5 125311266 125311599 -77773933 + Charlie1 DNA MER1_type 2351 2742 -19 264 221 128 12 chr5 125311653 125311739 -77773793 + MER103 DNA DNA 1 96 -70 260 242 11 33 chr5 125312963 125313054 -77772478 + L2 LINE L2 3142 3230 -42 347 342 0 0 chr5 125313185 125313302 -77772230 + L1MC/D LINE L1 5542 5658 -2150 1804 169 14 3 chr5 125313468 125313763 -77771769 + AluJb SINE Alu 1 298 -14 2345 86 10 0 chr5 125315200 125315502 -77770030 + AluSp SINE Alu 1 305 -8 590 129 92 80 chr5 125315504 125315667 -77769865 + Charlie5 DNA MER1_type 2421 2585 -27 4060 77 20 2 chr5 125315689 125316233 -77769299 + MER41A LTR ERV1 1 554 0 239 232 35 21 chr5 125316255 125316343 -77769189 - MER5A DNA MER1_type -81 108 9 1707 153 0 48 chr5 125316975 125317269 -77768263 - AluJb SINE Alu -30 282 3 885 309 199 48 chr5 125317726 125318625 -77766907 + L2 LINE L2 1782 2816 -498 239 281 144 18 chr5 125318715 125318882 -77766650 + L2 LINE L2 2969 3156 -157 415 243 153 17 chr5 125318988 125319084 -77766448 - MIR SINE MIR -43 219 137 2109 131 0 6 chr5 125319084 125319397 -77766135 - AluSx SINE Alu -1 311 1 415 243 153 17 chr5 125319397 125319477 -77766055 - MIR SINE MIR -125 137 19 1924 145 0 3 chr5 125320470 125320759 -77764773 + AluJb SINE Alu 1 288 -24 2003 110 10 32 chr5 125323241 125323550 -77761982 + AluSx SINE Alu 1 302 -10 504 0 0 0 chr5 125329574 125329630 -77755902 + (GA)n Simple_repeat Simple_repeat 1 56 0 320 301 264 5 chr5 125330115 125330308 -77755224 - MIR SINE MIR -3 259 17 225 0 0 0 chr5 125330903 125330928 -77754604 + (TG)n Simple_repeat Simple_repeat 2 26 0 2381 99 0 0 chr5 125330944 125331257 -77754275 + AluSq SINE Alu 1 313 0 300 316 0 20 chr5 125331328 125331426 -77754106 + L2 LINE L2 3218 3313 0 356 259 0 91 chr5 125331897 125332040 -77753492 - L2 LINE L2 -2 3311 3182 1342 189 24 27 chr5 125332143 125332440 -77753092 - AluJo SINE Alu -16 296 1 730 145 8 23 chr5 125332530 125332661 -77752871 - FLAM_C SINE Alu -2 131 3 244 185 0 62 chr5 125332663 125332728 -77752804 - MIR SINE MIR -120 142 82 2097 30 0 0 chr5 125332987 125333049 -77752483 - L1PA4 LINE L1 -83 6072 6011 581 313 33 4 chr5 125333049 125333292 -77752240 - L1MA4 LINE L1 -291 6009 5760 2097 130 0 0 chr5 125333307 125333608 -77751924 + AluSx SINE Alu 1 301 -11 2212 85 0 23 chr5 125333610 125333917 -77751615 + AluY SINE Alu 1 300 -11 805 188 0 24 chr5 125333917 125334082 -77751450 + AluSp SINE Alu 134 294 -19 360 248 8 68 chr5 125334084 125334217 -77751315 - AluJo/FLAM SINE Alu -177 125 1 1184 152 0 0 chr5 125334433 125334617 -77750915 + AluSg/x SINE Alu 115 298 -12 879 122 0 0 chr5 125334637 125334760 -77750772 + FLAM_C SINE Alu 12 134 -9 1060 145 0 0 chr5 125335069 125335228 -77750304 - AluSg/x SINE Alu -20 290 132 2084 101 28 0 chr5 125335228 125335516 -77750016 - AluSq SINE Alu -7 306 11 210 191 0 0 chr5 125336632 125336679 -77748853 + GA-rich Low_complexity Low_complexity 4 50 0 453 76 0 0 chr5 125337105 125337171 -77748361 + (TC)n Simple_repeat Simple_repeat 1 66 0 206 280 0 0 chr5 125337229 125337279 -77748253 + GA-rich Low_complexity Low_complexity 1 50 0 270 160 0 0 chr5 125337365 125337415 -77748117 + CT-rich Low_complexity Low_complexity 3 52 0 180 111 0 0 chr5 125338876 125338903 -77746629 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1254 142 28 18 chr5 125340187 125340405 -77745127 + AluJb SINE Alu 87 306 -6 1933 124 0 4 chr5 125342568 125342843 -77742689 + AluSx SINE Alu 26 299 -13 2437 49 0 16 chr5 125342843 125343151 -77742381 + AluY SINE Alu 1 303 -8 344 183 110 0 chr5 125343151 125343233 -77742299 + L1MB2 LINE L1 5970 6060 -111 1467 192 43 0 chr5 125343234 125343510 -77742022 + AluJo SINE Alu 1 288 -24 675 290 11 0 chr5 125343624 125343800 -77741732 - MIR SINE MIR -55 207 30 2260 87 0 3 chr5 125343807 125344105 -77741427 - AluSx SINE Alu -15 297 1 2294 76 0 22 chr5 125344117 125344432 -77741100 - AluSg SINE Alu -1 309 2 2403 67 0 0 chr5 125344435 125344732 -77740800 - AluY SINE Alu -14 297 1 336 58 0 39 chr5 125344732 125344784 -77740748 - AluSq/x SINE Alu -167 135 86 1040 134 89 55 chr5 125344784 125344986 -77740546 - AluJo SINE Alu -92 220 12 1241 167 30 17 chr5 125345086 125345319 -77740213 - AluJb SINE Alu -74 238 3 1165 187 75 4 chr5 125345385 125345626 -77739906 - AluJb SINE Alu -12 300 43 3116 156 69 83 chr5 125345673 125345804 -77739728 + LTR8A LTR ERV1 1 132 -595 1727 118 6 81 chr5 125345804 125346126 -77739406 - AluSx SINE Alu -14 298 1 3116 156 69 83 chr5 125346126 125346300 -77739232 + LTR8A LTR ERV1 132 307 -420 1841 133 10 13 chr5 125346300 125346600 -77738932 + AluSx SINE Alu 1 299 -13 3116 156 69 83 chr5 125346600 125347030 -77738502 + LTR8A LTR ERV1 307 727 0 329 67 0 0 chr5 125347672 125347717 -77737815 - LTR7 LTR ERV1 0 450 406 362 267 9 9 chr5 125348024 125348129 -77737403 - MER96 DNA MER1_type? -2 173 69 191 106 21 106 chr5 125399055 125399102 -77686430 + MIR SINE MIR 84 126 -136 1037 263 111 12 chr5 125399134 125399552 -77685980 + L1ME LINE L1 5357 5815 -347 354 182 61 0 chr5 125399873 125399939 -77685593 - MER113 DNA MER1_type? -208 313 244 1746 178 3 13 chr5 125400017 125400321 -77685211 + AluJb SINE Alu 1 301 -11 905 184 81 0 chr5 125400685 125400859 -77684673 - L1MB8 LINE L1 -3 6175 5988 2120 66 0 22 chr5 125401448 125401721 -77683811 + AluY SINE Alu 35 301 -10 511 194 0 0 chr5 125401721 125401824 -77683708 - L1 LINE L1 -1723 4423 4321 2054 141 0 3 chr5 125401904 125402210 -77683322 + AluSx SINE Alu 1 305 -7 410 306 49 14 chr5 125402303 125402447 -77683085 - ERVL LTR ERVL -398 5366 5218 22 35 0 0 chr5 125403380 125403409 -77682123 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 125405087 125405111 -77680421 + AT_rich Low_complexity Low_complexity 1 24 0 2241 115 3 3 chr5 125406475 125406788 -77678744 - AluSp SINE Alu 0 313 1 252 280 91 38 chr5 125407301 125407433 -77678099 + MIR3 SINE MIR 7 145 -63 279 227 0 40 chr5 125408219 125408294 -77677238 - MIR3 SINE MIR -46 162 91 1908 149 27 0 chr5 125408530 125408826 -77676706 + AluSx SINE Alu 1 304 -8 453 361 146 5 chr5 125409263 125409468 -77676064 + MIR SINE MIR 29 262 0 341 309 56 45 chr5 125412764 125412898 -77672634 - MIR3 SINE MIR -7 201 63 963 146 54 54 chr5 125412935 125413124 -77672408 + Tigger2 DNA MER2_type 4 195 -2523 511 128 26 0 chr5 125413124 125413202 -77672330 - MADE1 DNA Mariner 0 80 1 963 146 54 54 chr5 125413202 125413217 -77672315 + Tigger2 DNA MER2_type 194 208 -2510 847 164 0 27 chr5 125413214 125413360 -77672172 + Tigger2 DNA MER2_type 2554 2695 -23 * 6273 95 32 0 chr5 125413364 125414445 -77671087 - L1PA14 LINE L1 -2 6159 5041 915 187 25 62 chr5 125415889 125416130 -77669402 - MLT1A2 LTR MaLR 0 374 143 5887 65 1 1 chr5 125416134 125416875 -77668657 + L1PA7 LINE L1 5301 6041 -113 1288 77 18 0 chr5 125416975 125417145 -77668387 + MSTB1 LTR MaLR 260 432 0 724 159 23 30 chr5 125417145 125417276 -77668256 - MLT1A2 LTR MaLR -244 130 1 29 60 0 0 chr5 125418309 125418359 -77667173 + AT_rich Low_complexity Low_complexity 1 50 0 241 186 0 0 chr5 125418389 125418432 -77667100 + LTR10D LTR ERV1 471 513 0 230 156 0 0 chr5 125418589 125418634 -77666898 + LTR66 LTR ERVL 394 438 -172 229 182 0 0 chr5 125418661 125418716 -77666816 - L1MC4 LINE L1 -1339 6703 6649 1197 249 138 47 chr5 125418740 125419227 -77666305 - ERVL LTR ERVL -387 5377 4847 7254 162 51 66 chr5 125419233 125420925 -77664607 - L1MA4 LINE L1 0 6300 4584 879 93 78 0 chr5 125420925 125421054 -77664478 + MER85 DNA T2_type 1 139 0 7254 162 51 66 chr5 125421054 125421171 -77664361 - L1MA4 LINE L1 -1716 4584 4467 1843 115 8 0 chr5 125421171 125421431 -77664101 - AluSg SINE Alu -16 294 33 7254 162 51 66 chr5 125421431 125421977 -77663555 - L1MA4 LINE L1 -1833 4467 3989 1701 142 121 38 chr5 125421977 125422323 -77663209 - THE1C LTR MaLR 0 375 1 7254 162 51 66 chr5 125422323 125422658 -77662874 - L1MA4 LINE L1 -2311 3989 3650 1829 187 55 41 chr5 125422969 125422986 -77662546 + MLT1A2 LTR MaLR 11 26 -348 1908 112 75 4 chr5 125422986 125423264 -77662268 - AluSx SINE Alu -14 298 1 1829 187 55 41 chr5 125423264 125423620 -77661912 + MLT1A2 LTR MaLR 26 370 -4 687 290 52 29 chr5 125423827 125424134 -77661398 - ERVL LTR ERVL -3920 1844 1531 879 53 147 0 chr5 125424443 125424633 -77660899 + L1P3 LINE L1 5378 5595 -559 2391 46 0 0 chr5 125424739 125425021 -77660511 + L1P3 LINE L1 5400 5681 -473 641 126 0 11 chr5 125425021 125425108 -77660424 - AluSc SINE Alu -84 225 140 928 144 46 0 chr5 125425109 125425282 -77660250 + L1P LINE L1 5098 5278 -868 2908 170 13 92 chr5 125426126 125426727 -77658805 + MLT2B3 LTR ERVL 1 554 0 213 280 97 21 chr5 125427777 125427870 -77657662 + MIR SINE MIR 49 148 -60 243 316 120 8 chr5 125429210 125429327 -77656205 + L2 LINE L2 3143 3272 0 366 137 123 0 chr5 125430891 125430964 -77654568 + MER41B LTR ERV1 460 541 -94 588 14 0 0 chr5 125430964 125431033 -77654499 + (CA)n Simple_repeat Simple_repeat 2 70 0 196 270 170 0 chr5 125432744 125432844 -77652688 - MIR SINE MIR -65 197 81 408 177 46 0 chr5 125433430 125433524 -77652008 + MLT1E1 LTR MaLR 487 654 0 28 29 0 0 chr5 125435863 125435898 -77649634 + AT_rich Low_complexity Low_complexity 1 35 0 539 201 95 16 chr5 125435964 125436005 -77649527 + MLT1A2 LTR MaLR 212 248 -126 1780 148 68 4 chr5 125436005 125436283 -77649249 + AluJb SINE Alu 1 296 -16 539 201 95 16 chr5 125436283 125436412 -77649120 + MLT1A2 LTR MaLR 248 374 0 445 233 53 45 chr5 125436719 125436852 -77648680 + MER94 DNA DNA 1 134 0 235 327 63 31 chr5 125439014 125439173 -77646359 - MIR3 SINE MIR -10 198 35 4824 133 29 11 chr5 125439974 125440738 -77644794 - L1MA4A LINE L1 -5 6298 5521 1242 264 76 36 chr5 125440992 125441466 -77644066 + MLT1J LTR MaLR 13 505 -6 2316 209 91 6 chr5 125442927 125443434 -77642098 - MER44D DNA MER2_type 0 605 1 475 327 20 15 chr5 125443767 125443956 -77641576 - MIR SINE MIR -2 260 68 372 34 356 0 chr5 125443956 125444015 -77641517 + MADE1 DNA Mariner 1 80 0 372 200 21 32 chr5 125444614 125444709 -77640823 - MIR3 SINE MIR -7 201 108 22 35 0 0 chr5 125445087 125445116 -77640416 + AT_rich Low_complexity Low_complexity 1 29 0 719 269 65 14 chr5 125445600 125445816 -77639716 - MIR SINE MIR -24 238 12 459 0 0 0 chr5 125446837 125446888 -77638644 + (TG)n Simple_repeat Simple_repeat 2 52 0 388 276 62 28 chr5 125447550 125447695 -77637837 + MIR SINE MIR 89 238 -24 1794 172 0 7 chr5 125447714 125448010 -77637522 - AluJb SINE Alu -13 299 6 333 319 84 31 chr5 125448681 125448907 -77636625 + L2 LINE L2 3075 3312 -1 372 229 118 49 chr5 125449076 125449220 -77636312 + L1ME4a LINE L1 5955 6108 -13 532 288 219 23 chr5 125449341 125449775 -77635757 - L3 LINE CR1 -13 1564 1046 361 220 66 0 chr5 125449790 125449881 -77635651 - MIR SINE MIR -53 209 113 186 265 84 36 chr5 125450846 125450929 -77634603 - L3 LINE CR1 -1325 252 166 2129 156 21 6 chr5 125452138 125452494 -77633038 + MLT1A1 LTR MaLR 1 365 0 359 274 49 145 chr5 125455726 125456388 -77629144 + L2 LINE L2 2558 3178 -94 1013 181 13 150 chr5 125456495 125456881 -77628651 + MLT1A1 LTR MaLR 2 334 -31 1162 234 0 9 chr5 125457113 125457339 -77628193 + MER58A DNA MER1_type 1 224 0 306 326 147 0 chr5 125457560 125457689 -77627843 + L2 LINE L2 3125 3272 0 408 267 130 27 chr5 125457887 125458033 -77627499 + MIR SINE MIR 50 210 -52 3353 220 52 87 chr5 125461041 125461147 -77624385 - L1M4 LINE L1 -1410 4736 4628 2448 66 0 7 chr5 125461147 125461452 -77624080 - AluY SINE Alu -8 303 1 3353 220 52 87 chr5 125461452 125462014 -77623518 - L1M4 LINE L1 -1518 4628 4048 1869 168 3 3 chr5 125462014 125462318 -77623214 + AluJb SINE Alu 1 304 -8 3353 220 52 87 chr5 125462318 125462358 -77623174 - L1M4 LINE L1 -2098 4048 4008 4347 143 11 51 chr5 125462358 125463078 -77622454 + LTR8 LTR ERV1 1 691 0 3353 220 52 87 chr5 125463078 125463624 -77621908 - L1M4 LINE L1 -2138 4008 3523 296 296 75 69 chr5 125463830 125463989 -77621543 - L2 LINE L2 -39 3233 3074 337 276 200 38 chr5 125464352 125464537 -77620995 + Charlie8 DNA MER1_type 59 273 -2144 184 333 0 27 chr5 125465097 125465172 -77620360 - MIR SINE MIR -41 221 149 2201 98 7 26 chr5 125465176 125465483 -77620049 - AluSx SINE Alu -11 301 1 218 333 37 12 chr5 125466850 125466931 -77618601 - MIR3 SINE MIR -7 201 119 1720 152 0 11 chr5 125466981 125467245 -77618287 + AluSq SINE Alu 1 261 -52 189 0 0 0 chr5 125467254 125467275 -77618257 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 275 301 103 34 chr5 125467927 125468073 -77617459 + MIR SINE MIR 32 187 -75 421 212 0 53 chr5 125469259 125469372 -77616160 + MSTC LTR MaLR 1 107 -321 182 91 30 0 chr5 125469402 125469435 -77616097 + (CA)n Simple_repeat Simple_repeat 2 35 0 1621 265 223 8 chr5 125469518 125470345 -77615187 - L2 LINE L2 -267 3046 2021 1974 148 17 31 chr5 125470712 125471064 -77614468 + MER7A DNA MER2_type 1 345 -1 24 32 0 0 chr5 125473799 125473830 -77611702 + AT_rich Low_complexity Low_complexity 1 31 0 499 210 138 14 chr5 125473882 125474020 -77611512 + MIR SINE MIR 9 163 -99 228 274 55 0 chr5 125474102 125474175 -77611357 + MIR SINE MIR 172 248 -14 31 0 0 0 chr5 125475421 125475452 -77610080 + AT_rich Low_complexity Low_complexity 1 31 0 746 237 53 53 chr5 125477469 125477714 -77607818 + MIR SINE MIR 8 252 -10 338 327 92 57 chr5 125482280 125482931 -77602601 + HAL1 LINE L1 1 674 -1833 393 341 111 48 chr5 125483336 125483749 -77601783 + L3 LINE CR1 581 1019 -558 1957 103 18 11 chr5 125486124 125486396 -77599136 + AluSq SINE Alu 28 301 -12 241 297 173 22 chr5 125488660 125488845 -77596687 - L2 LINE L2 -615 2699 2487 816 147 14 42 chr5 125489200 125489343 -77596189 + FRAM SINE Alu 28 166 -10 24 0 0 0 chr5 125489519 125489543 -77595989 + AT_rich Low_complexity Low_complexity 1 24 0 375 134 60 0 chr5 125489581 125489648 -77595884 + Tigger4(Zombi) DNA MER2_type 2661 2731 0 2169 97 6 53 chr5 125489906 125490226 -77595306 - AluSg SINE Alu -3 307 3 198 0 0 0 chr5 125490226 125490248 -77595284 + (TC)n Simple_repeat Simple_repeat 2 23 0 402 288 65 38 chr5 125491402 125491586 -77593946 - MIR3 SINE MIR -17 191 3 303 276 94 44 chr5 125492711 125492892 -77592640 - Charlie8 DNA MER1_type -2226 191 2 3156 113 52 40 chr5 125493313 125493834 -77591698 + MER1A DNA MER1_type 1 527 0 364 287 143 75 chr5 125494720 125495211 -77590321 + HAL1 LINE L1 828 1351 -1156 406 274 134 20 chr5 125495243 125495444 -77590088 + HAL1 LINE L1 1540 1763 -744 2184 100 0 0 chr5 125495993 125496274 -77589258 + AluSq SINE Alu 25 305 -8 269 222 0 0 chr5 125496626 125496680 -77588852 + MLT1K LTR MaLR 535 588 0 422 241 95 0 chr5 125497369 125497485 -77588047 - L2 LINE L2 -1 3312 3186 304 275 0 0 chr5 125497712 125497792 -77587740 - L2 LINE L2 -923 2391 2312 1980 142 15 30 chr5 125499430 125499769 -77585763 + MER1B DNA MER1_type 3 336 -1 920 83 53 0 chr5 125500784 125500916 -77584616 - MER85 DNA T2_type 0 139 1 2819 195 100 25 chr5 125501207 125502036 -77583496 - Charlie1 DNA MER1_type 0 2761 1871 1778 149 17 0 chr5 125502144 125502445 -77583087 - MER47A DNA MER2_type -10 356 51 237 178 41 27 chr5 125502460 125502533 -77582999 + L1ME LINE L1 5852 5925 -196 27 0 0 0 chr5 125503165 125503192 -77582340 + AT_rich Low_complexity Low_complexity 1 27 0 274 322 106 22 chr5 125503595 125503775 -77581757 - MIR SINE MIR -21 241 47 926 209 34 0 chr5 125503789 125503966 -77581566 - MER5A DNA MER1_type -1 188 6 1438 198 35 32 chr5 125505666 125505845 -77579687 + MER58B DNA MER1_type 2 184 -2236 2123 104 17 0 chr5 125505845 125506132 -77579400 + AluSx SINE Alu 1 292 -20 1438 198 35 32 chr5 125506132 125506291 -77579241 + MER58B DNA MER1_type 184 341 0 225 0 0 0 chr5 125507323 125507348 -77578184 + (CA)n Simple_repeat Simple_repeat 2 26 0 622 201 144 7 chr5 125507626 125507765 -77577767 - FRAM SINE Alu -8 158 1 183 42 0 0 chr5 125507882 125507906 -77577626 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 218 288 62 62 chr5 125508512 125508592 -77576940 - MIR SINE MIR -56 206 127 1148 174 184 0 chr5 125508673 125508967 -77576565 + L1MB8 LINE L1 5828 6175 -3 1370 203 108 38 chr5 125512679 125513049 -77572483 + MSTD LTR MaLR 1 396 0 313 185 92 0 chr5 125513250 125513315 -77572217 + MIR SINE MIR 63 133 -129 2164 114 0 3 chr5 125515442 125515740 -77569792 - AluSq SINE Alu -12 301 5 1202 145 12 17 chr5 125516690 125516962 -77568570 - MER2 DNA MER2_type -25 320 7 183 42 0 0 chr5 125517048 125517072 -77568460 + (T)n Simple_repeat Simple_repeat 1 24 0 1546 171 10 49 chr5 125517717 125518021 -77567511 - AluJb SINE Alu -20 292 1 2139 84 0 78 chr5 125518143 125518465 -77567067 + AluSx SINE Alu 1 297 -15 405 314 113 4 chr5 125518943 125519172 -77566360 + L2 LINE L2 2251 2504 -810 441 324 39 6 chr5 125519214 125519393 -77566139 + MIR SINE MIR 7 191 -71 335 326 98 62 chr5 125519415 125519832 -77565700 - L2 LINE L2 -22 3250 2819 237 304 136 16 chr5 125521640 125521765 -77563767 - L2 LINE L2 -195 3077 2938 443 310 51 25 chr5 125523008 125523219 -77562313 - MIR SINE MIR 0 262 50 1376 142 7 75 chr5 125524371 125524652 -77560880 + L1M3 LINE L1 5259 5520 -660 1986 119 63 39 chr5 125524872 125525234 -77560298 + Tigger2a DNA MER2_type 1 371 -63 875 190 61 0 chr5 125525235 125525398 -77560134 + AluJb SINE Alu 86 258 -54 202 313 16 0 chr5 125525694 125525758 -77559774 + MIR3 SINE MIR 109 173 -35 243 301 87 19 chr5 125526300 125526403 -77559129 + L2 LINE L2 1965 2074 -1240 1000 260 179 12 chr5 125526516 125526967 -77558565 + L2 LINE L2 2784 3309 -4 244 370 50 0 chr5 125527133 125527233 -77558299 - L2 LINE L2 -35 3237 3133 2292 90 3 0 chr5 125528417 125528706 -77556826 - AluSg1 SINE Alu -19 290 1 388 333 75 6 chr5 125529848 125530022 -77555510 + MIR SINE MIR 31 216 -46 2253 112 7 0 chr5 125530137 125530440 -77555092 + AluSg SINE Alu 6 310 0 510 248 220 50 chr5 125530495 125530827 -77554705 + MLT1F LTR MaLR 11 353 -189 398 213 85 11 chr5 125530829 125530923 -77554609 + MLT1F LTR MaLR 471 571 -24 268 212 15 45 chr5 125531046 125531112 -77554420 + MIR3 SINE MIR 136 199 -9 29 0 0 0 chr5 125531535 125531564 -77553968 + AT_rich Low_complexity Low_complexity 1 29 0 1874 118 0 19 chr5 125533072 125533343 -77552189 + AluSx SINE Alu 44 309 -3 184 253 132 33 chr5 125533962 125534053 -77551479 + MIR SINE MIR 36 135 -73 234 91 0 0 chr5 125536246 125536279 -77549253 + (A)n Simple_repeat Simple_repeat 1 33 0 199 290 77 106 chr5 125537339 125537836 -77547696 - L2 LINE L2 -76 3196 2702 1912 112 12 62 chr5 125538299 125538415 -77547117 + AluSx SINE Alu 6 126 -186 1679 108 4 4 chr5 125538415 125538647 -77546885 + AluSg SINE Alu 58 289 -21 1912 112 12 62 chr5 125538647 125538851 -77546681 + AluSx SINE Alu 126 310 -2 353 364 92 44 chr5 125538889 125539609 -77545923 - L2 LINE L2 -817 2497 1744 2410 79 0 19 chr5 125540091 125540407 -77545125 + AluSg SINE Alu 1 310 0 321 311 44 30 chr5 125542092 125542227 -77543305 - L2 LINE L2 -5 3308 3172 2400 83 3 0 chr5 125542250 125542552 -77542980 + AluSp SINE Alu 1 303 -10 257 136 0 0 chr5 125542562 125542606 -77542926 + AluSp/q SINE Alu 258 301 -2 377 297 124 14 chr5 125542606 125542815 -77542717 - L2 LINE L2 -160 3153 2922 242 349 105 13 chr5 125542896 125543048 -77542484 - L2 LINE L2 -461 2853 2688 591 225 41 64 chr5 125543056 125543274 -77542258 + L1MC5 LINE L1 7068 7280 -681 1296 178 33 108 chr5 125543338 125543828 -77541704 + L1MC5 LINE L1 7428 7880 -81 1459 294 103 43 chr5 125543870 125544734 -77540798 - L2 LINE L2 -611 2703 1788 2123 85 29 7 chr5 125544734 125545015 -77540517 - AluSx SINE Alu -19 293 7 201 371 106 4 chr5 125546385 125546630 -77538902 + L2 LINE L2 2231 2500 -814 5567 186 72 12 chr5 125546820 125548867 -77536665 - L1MA10 LINE L1 -12 6322 3999 1325 181 0 5 chr5 125549040 125549256 -77536276 - AluJb SINE Alu -14 298 84 1444 160 83 31 chr5 125549606 125549971 -77535561 + AluJo SINE Alu 1 380 0 3043 133 7 74 chr5 125550259 125550839 -77534693 - L1PB3 LINE L1 -1 6153 5613 602 213 7 0 chr5 125550869 125551019 -77534513 + CT-rich Low_complexity Low_complexity 2 152 0 1199 211 51 113 chr5 125551174 125551563 -77533969 + MLT1A1 LTR MaLR 1 365 0 309 273 91 0 chr5 125551956 125552044 -77533488 - L2 LINE L2 -1 3312 3217 765 209 13 26 chr5 125552048 125552201 -77533331 + FRAM SINE Alu 1 151 -15 569 222 126 109 chr5 125552248 125552644 -77532888 + MLT1H LTR MaLR 1 403 -146 2144 108 7 14 chr5 125552756 125552891 -77532641 + AluSq SINE Alu 1 135 -178 2280 103 0 0 chr5 125552891 125553193 -77532339 + AluSg SINE Alu 1 302 -8 2144 108 7 14 chr5 125553193 125553353 -77532179 + AluSq SINE Alu 135 294 -19 480 339 52 27 chr5 125553441 125553762 -77531770 - L2 LINE L2 -215 3057 2733 209 184 0 0 chr5 125553932 125553970 -77531562 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 337 248 107 66 chr5 125553973 125554094 -77531438 - L2 LINE L2 -38 3234 3109 2161 87 10 14 chr5 125554130 125554442 -77531090 + AluSg SINE Alu 1 310 0 1928 144 7 0 chr5 125554862 125555183 -77530349 - AluJo SINE Alu 0 324 2 2353 103 0 0 chr5 125555651 125555952 -77529580 - AluSx SINE Alu -11 301 1 249 247 39 0 chr5 125556452 125556529 -77529003 - MER116 DNA Mariner 0 80 1 1776 160 0 33 chr5 125556650 125556950 -77528582 + AluJb SINE Alu 1 290 -22 2346 90 3 0 chr5 125557041 125557340 -77528192 + AluSg SINE Alu 1 300 -10 434 286 8 23 chr5 125559261 125559394 -77526138 - MIR SINE MIR -103 159 29 1177 278 71 27 chr5 125559414 125559527 -77526005 + MER113 DNA MER1_type? 18 125 -396 3057 65 16 0 chr5 125559527 125559909 -77525623 + L1PA13 LINE L1 5773 6160 -3 1177 278 71 27 chr5 125559909 125559928 -77525604 + MER113 DNA MER1_type? 125 142 -379 1769 174 3 13 chr5 125559928 125560232 -77525300 - AluJb SINE Alu -11 301 1 1177 278 71 27 chr5 125560232 125560576 -77524956 + MER113 DNA MER1_type? 142 516 -5 581 203 153 68 chr5 125562790 125562888 -77522644 - MER5A DNA MER1_type 0 189 70 2266 114 3 0 chr5 125562888 125563195 -77522337 - AluSx SINE Alu -4 308 1 581 203 153 68 chr5 125563195 125563259 -77522273 - MER5A DNA MER1_type -119 70 13 319 288 0 0 chr5 125563742 125563808 -77521724 - L2 LINE L2 -4 3268 3203 3018 184 33 4 chr5 125563894 125564415 -77521117 + MLT1F LTR MaLR 7 542 0 290 312 116 37 chr5 125564439 125564799 -77520733 - L2 LINE L2 -193 3079 2691 903 221 0 0 chr5 125564803 125564961 -77520571 + FAM SINE Alu 1 158 -17 29 0 0 0 chr5 125565381 125565410 -77520122 + AT_rich Low_complexity Low_complexity 1 29 0 326 252 99 0 chr5 125565456 125565587 -77519945 - L1ME4a LINE L1 -27 6094 5951 237 235 49 12 chr5 125565620 125565701 -77519831 - L1ME4a LINE L1 0 6121 6038 1803 151 16 40 chr5 125565898 125566202 -77519330 - AluJo SINE Alu -15 297 1 1176 196 101 46 chr5 125567361 125567707 -77517825 - MLT1A1 LTR MaLR 0 365 1 2288 98 3 0 chr5 125568327 125568624 -77516908 + AluSx SINE Alu 1 298 -14 261 0 0 0 chr5 125568624 125568653 -77516879 + (TA)n Simple_repeat Simple_repeat 1 29 0 652 75 0 0 chr5 125568939 125569019 -77516513 - MADE1 DNA Mariner 0 80 1 224 341 0 35 chr5 125569375 125569460 -77516072 + MIR SINE MIR 178 259 -3 494 367 61 4 chr5 125570147 125570376 -77515156 + MIR SINE MIR 13 254 -8 489 219 0 0 chr5 125570543 125570662 -77514870 + (CATA)n Simple_repeat Simple_repeat 2 120 0 1220 201 141 46 chr5 125571136 125571504 -77514028 + MER57A LTR ERV1 1 403 0 343 350 86 0 chr5 125572602 125572742 -77512790 + MIR3 SINE MIR 35 186 -22 2074 95 7 7 chr5 125572777 125573099 -77512433 - AluSq SINE Alu 0 322 1 916 206 11 0 chr5 125573332 125573507 -77512025 - FRAM SINE Alu -1 175 1 443 214 72 156 chr5 125573524 125573591 -77511941 - LTR37B LTR ERV1 -68 400 329 755 219 71 0 chr5 125573591 125573746 -77511786 + FRAM SINE Alu 1 166 0 443 214 72 156 chr5 125573746 125574109 -77511423 - LTR37B LTR ERV1 -139 329 6 343 239 12 56 chr5 125574887 125575049 -77510483 + L1MC4 LINE L1 1959 6983 -1339 331 311 0 0 chr5 125574999 125575089 -77510443 - L1MC4 LINE L1 -1339 6703 6614 * 273 263 0 0 chr5 125575089 125575146 -77510386 + (TA)n Simple_repeat Simple_repeat 2 58 0 680 180 41 35 chr5 125575266 125575438 -77510094 + AluJo SINE Alu 126 298 -14 397 299 211 25 chr5 125575600 125575903 -77509629 + L2 LINE L2 1818 2200 -1114 1675 158 7 35 chr5 125575903 125576213 -77509319 - AluJb SINE Alu -11 301 1 397 299 211 25 chr5 125576213 125576270 -77509262 + L2 LINE L2 2200 2245 -1069 318 273 91 0 chr5 125576754 125576842 -77508690 - L2 LINE L2 -1 3312 3217 713 209 13 26 chr5 125576846 125576999 -77508533 + FRAM SINE Alu 1 151 -15 479 271 170 16 chr5 125577046 125577352 -77508180 + MLT1H LTR MaLR 1 353 -196 195 307 129 55 chr5 125578522 125578601 -77506931 - MIR SINE MIR -41 221 149 2184 90 7 27 chr5 125578601 125578902 -77506630 - AluSx SINE Alu -11 301 7 195 307 129 55 chr5 125578902 125578985 -77506547 - MIR SINE MIR -113 149 47 2154 87 10 14 chr5 125579554 125579866 -77505666 + AluSg SINE Alu 1 310 0 1934 144 7 0 chr5 125580286 125580607 -77504925 - AluJo SINE Alu 0 324 2 2229 99 0 10 chr5 125581076 125581380 -77504152 - AluSx SINE Alu -11 301 1 196 346 37 12 chr5 125582747 125582828 -77502704 - MIR3 SINE MIR -7 201 119 1725 152 0 11 chr5 125582878 125583142 -77502390 + AluSq SINE Alu 1 261 -52 189 0 0 0 chr5 125583151 125583172 -77502360 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 272 306 88 27 chr5 125583824 125583971 -77501561 + MIR SINE MIR 32 187 -75 379 212 0 53 chr5 125585173 125585286 -77500246 + MSTC LTR MaLR 1 107 -321 182 91 30 0 chr5 125585316 125585349 -77500183 + (CA)n Simple_repeat Simple_repeat 2 35 0 846 234 159 12 chr5 125585432 125585774 -77499758 - L2 LINE L2 -267 3046 2631 1199 195 73 61 chr5 125586386 125586762 -77498770 - MLT1B LTR MaLR 0 396 11 925 297 46 14 chr5 125587196 125587543 -77497989 - LTR16A LTR ERVL -67 383 26 466 284 88 60 chr5 125590048 125590333 -77495199 - HAL1 LINE L1 -27 2480 2188 240 260 26 0 chr5 125590371 125590448 -77495084 + MLT1J LTR MaLR 420 498 -13 1987 269 85 70 chr5 125590452 125591159 -77494373 - HAL1 LINE L1 -758 1749 1054 2015 140 7 0 chr5 125591159 125591444 -77494088 - AluSx SINE Alu -23 289 3 1987 269 85 70 chr5 125591444 125591693 -77493839 - HAL1 LINE L1 -1453 1054 810 477 0 0 0 chr5 125591693 125591746 -77493786 + (TG)n Simple_repeat Simple_repeat 2 54 0 1987 269 85 70 chr5 125591746 125592203 -77493329 - HAL1 LINE L1 -1697 810 314 2704 209 80 5 chr5 125592346 125592948 -77492584 + MER82 DNA MER2_type 1 647 -6 1728 161 16 116 chr5 125593313 125593797 -77491735 - MER63B DNA MER1_type 0 436 1 2184 111 3 7 chr5 125594555 125594861 -77490671 + AluSx SINE Alu 1 305 -7 28 71 0 0 chr5 125595666 125595722 -77489810 + AT_rich Low_complexity Low_complexity 1 56 0 183 100 0 0 chr5 125595814 125595844 -77489688 + (TTTTTA)n Simple_repeat Simple_repeat 1 30 0 3766 18 0 2 chr5 125595844 125596284 -77489248 - L1PA4 LINE L1 -1 6154 5716 491 153 0 132 chr5 125596286 125596387 -77489145 - L1MB7 LINE L1 -47 6137 6059 1687 127 15 106 chr5 125596387 125596726 -77488806 + AluJo SINE Alu 5 312 0 491 153 0 132 chr5 125596726 125596768 -77488764 - L1MB7 LINE L1 -125 6059 6013 490 130 0 43 chr5 125596776 125596868 -77488664 - L1MB7 LINE L1 -529 5655 5568 285 75 0 0 chr5 125597165 125597205 -77488327 + (ATG)n Simple_repeat Simple_repeat 2 41 0 465 298 82 0 chr5 125597210 125597381 -77488151 - MIR SINE MIR -12 250 66 186 143 0 0 chr5 125597566 125597601 -77487931 + (T)n Simple_repeat Simple_repeat 1 35 0 354 38 0 19 chr5 125597602 125597655 -77487877 - L1PA4 LINE L1 -1 6154 6103 1990 134 0 14 chr5 125597932 125598216 -77487316 - AluJb SINE Alu -15 297 18 2317 88 3 3 chr5 125598613 125598910 -77486622 + AluSc SINE Alu 2 298 -11 246 297 0 0 chr5 125599259 125599323 -77486209 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1060 169 18 0 chr5 125599441 125599607 -77485925 - FAM SINE Alu -6 169 1 661 69 0 0 chr5 125599691 125599778 -77485754 + L1PA6 LINE L1 10 96 -6365 * 31132 67 4 8 chr5 125599776 125604180 -77481352 + L1PA6 LINE L1 1162 5544 -917 6926 62 5 2 chr5 125604368 125605259 -77480273 + L1PA6 LINE L1 5569 6461 -8 21 36 0 0 chr5 125605502 125605530 -77480002 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 125605975 125605996 -77479536 + AT_rich Low_complexity Low_complexity 1 21 0 1892 163 0 0 chr5 125606227 125606516 -77479016 + AluJo SINE Alu 4 292 -20 475 239 43 60 chr5 125607168 125607352 -77478180 - MER5A DNA MER1_type -2 187 7 360 225 108 63 chr5 125607949 125608060 -77477472 + MIR SINE MIR 36 151 -57 1556 127 0 4 chr5 125608062 125608306 -77477226 + L1PA8 LINE L1 5922 6164 -8 215 246 215 0 chr5 125608684 125608749 -77476783 + MIR SINE MIR 37 115 -147 21 0 0 0 chr5 125608799 125608820 -77476712 + AT_rich Low_complexity Low_complexity 1 21 0 1797 138 15 68 chr5 125610111 125610436 -77475096 - AluJo SINE Alu -4 308 1 765 273 77 32 chr5 125611098 125611409 -77474123 - L1MC4a LINE L1 -1908 5900 5576 2265 118 0 3 chr5 125611776 125612082 -77473450 + AluSx SINE Alu 1 305 -7 247 134 183 207 chr5 125612815 125612979 -77472553 + MER5C DNA MER1_type 1 160 -164 647 124 0 0 chr5 125613024 125613113 -77472419 + FRAM SINE Alu 41 129 -47 1724 142 17 40 chr5 125613489 125613632 -77471900 + AluJo SINE Alu 1 135 -177 2529 50 0 0 chr5 125613632 125613931 -77471601 - AluY SINE Alu -12 299 1 1724 142 17 40 chr5 125613931 125614083 -77471449 + AluJo SINE Alu 135 289 -23 35 54 0 0 chr5 125614086 125614142 -77471390 + AT_rich Low_complexity Low_complexity 1 56 0 25 0 0 0 chr5 125614154 125614179 -77471353 + AT_rich Low_complexity Low_complexity 1 25 0 267 294 29 0 chr5 125615147 125615215 -77470317 - L2 LINE L2 0 3272 3203 190 309 0 0 chr5 125615266 125615321 -77470211 + MIR SINE MIR 171 225 -37 2380 100 0 0 chr5 125615521 125615830 -77469702 + AluSx SINE Alu 1 309 -3 2389 75 3 3 chr5 125616435 125616740 -77468792 - AluY SINE Alu -6 305 1 805 135 104 83 chr5 125616834 125617026 -77468506 + MER3 DNA MER1_type 14 209 0 5578 131 17 1 chr5 125617147 125618364 -77467168 - L1PA16 LINE L1 -53 6113 4882 537 290 0 8 chr5 125619109 125619233 -77466299 - L2 LINE L2 -4 3309 3187 1602 162 7 22 chr5 125619323 125619594 -77465938 - AluSx SINE Alu -45 267 1 1991 156 7 0 chr5 125619597 125619898 -77465634 - AluJo SINE Alu -9 303 1 250 192 14 199 chr5 125619982 125620128 -77465404 - MER5B DNA MER1_type -29 149 31 2530 73 147 10 chr5 125620210 125620619 -77464913 - MER4C LTR ERV1 0 465 1 264 339 113 0 chr5 125620792 125620907 -77464625 - L2 LINE L2 0 3313 3186 1030 209 19 0 chr5 125620911 125621122 -77464410 - MER58A DNA MER1_type -9 215 1 431 338 163 40 chr5 125621211 125622048 -77463484 - L2 LINE L2 -192 3080 2125 250 282 122 23 chr5 125622309 125622440 -77463092 + L1ME LINE L1 5524 5667 -454 309 302 50 50 chr5 125622896 125623098 -77462434 - L1ME3A LINE L1 -224 5946 5745 723 254 12 0 chr5 125623099 125623268 -77462264 + MIR SINE MIR 92 262 0 547 272 90 79 chr5 125623313 125623688 -77461844 - L1ME3A LINE L1 -461 5709 5322 1010 158 18 0 chr5 125623688 125623859 -77461673 - FAM SINE Alu -1 174 1 547 272 90 79 chr5 125623859 125623928 -77461604 - L1ME3A LINE L1 -848 5322 5255 423 272 25 114 chr5 125623987 125624208 -77461324 - HAL1 LINE L1 -2 2505 2321 1757 168 3 33 chr5 125624208 125624511 -77461021 - AluJo SINE Alu -18 294 1 423 272 25 114 chr5 125624511 125624613 -77460919 - HAL1 LINE L1 -186 2321 2211 696 208 66 31 chr5 125626453 125626679 -77458853 - MLT1H LTR MaLR -272 277 44 269 276 171 46 chr5 125627033 125627152 -77458380 + MIR SINE MIR 6 149 -113 2641 146 22 5 chr5 125627152 125627569 -77457963 - MSTB LTR MaLR -2 424 1 269 276 171 46 chr5 125627569 125627601 -77457931 + MIR SINE MIR 149 176 -86 649 206 8 0 chr5 125628094 125628220 -77457312 - MIR SINE MIR 0 262 136 245 235 0 12 chr5 125629118 125629199 -77456333 + (TA)n Simple_repeat Simple_repeat 2 81 0 2195 85 0 0 chr5 125631354 125631635 -77453897 - AluY SINE Alu -30 281 1 353 218 68 54 chr5 125632249 125632396 -77453136 - L1ME4a LINE L1 -5 6116 5968 225 213 21 0 chr5 125632541 125632588 -77452944 + L2 LINE L2 3224 3271 -1 702 280 136 9 chr5 125633061 125633275 -77452257 + MIR SINE MIR 12 252 -10 1718 163 64 3 chr5 125633388 125633671 -77451861 + AluJo SINE Alu 1 300 -12 1345 313 165 27 chr5 125633832 125634135 -77451397 + L2 LINE L2 1818 2078 -1235 1874 159 7 7 chr5 125634135 125634436 -77451096 - AluJb SINE Alu -11 301 1 1345 313 165 27 chr5 125634436 125635415 -77450117 + L2 LINE L2 2078 3300 -13 243 0 0 0 chr5 125635415 125635442 -77450090 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 434 256 30 0 chr5 125635977 125636110 -77449422 + MER103 DNA DNA 24 160 -6 333 353 40 25 chr5 125636387 125636588 -77448944 + MIR SINE MIR 58 261 -1 1048 307 82 13 chr5 125638788 125639251 -77446281 - MLT1K LTR MaLR -91 497 3 297 0 0 0 chr5 125639335 125639368 -77446164 + (TG)n Simple_repeat Simple_repeat 2 34 0 1329 210 59 80 chr5 125640032 125640508 -77445024 + MLT1H LTR MaLR 71 536 -13 2200 113 7 7 chr5 125640930 125641232 -77444300 - AluJb SINE Alu -9 303 2 192 40 0 0 chr5 125641714 125641739 -77443793 + (A)n Simple_repeat Simple_repeat 1 25 0 1794 125 61 27 chr5 125641751 125642048 -77443484 + AluJb SINE Alu 1 307 -5 2472 62 0 3 chr5 125642736 125643045 -77442487 - AluY SINE Alu -1 310 3 716 235 7 7 chr5 125643088 125643241 -77442291 + FRAM SINE Alu 1 153 -13 21 36 0 0 chr5 125643417 125643445 -77442087 + AT_rich Low_complexity Low_complexity 1 28 0 413 349 30 18 chr5 125644526 125644695 -77440837 - MIR3 SINE MIR -8 200 30 2194 111 0 13 chr5 125644702 125645009 -77440523 - AluSx SINE Alu -9 303 1 491 238 93 10 chr5 125646305 125646498 -77439034 + HAL1 LINE L1 836 1044 -1463 4288 154 80 26 chr5 125646522 125647327 -77438205 + MER21B LTR ERV1 1 848 -15 707 232 96 16 chr5 125647623 125647873 -77437659 + HAL1 LINE L1 1372 1641 -866 2040 113 65 73 chr5 125647885 125648433 -77437099 + LTR35 LTR ERV1 1 618 0 450 259 90 5 chr5 125648485 125648697 -77436835 + HAL1 LINE L1 1855 2084 -423 1842 169 10 3 chr5 125648843 125649145 -77436387 + AluJo SINE Alu 1 304 -8 349 256 118 44 chr5 125649503 125649909 -77435623 + L1MEd LINE L1 645 1080 -5039 2745 109 44 7 chr5 125649909 125650322 -77435210 + MSTA LTR MaLR 1 428 0 8954 168 33 18 chr5 125650322 125651683 -77433849 + MSTA-int LTR MaLR 1 1391 -260 2282 123 3 0 chr5 125651683 125651992 -77433540 - AluSg SINE Alu 0 310 1 8954 168 33 18 chr5 125651992 125652257 -77433275 + MSTA-int LTR MaLR 1391 1651 0 2377 140 40 26 chr5 125652258 125652638 -77432894 + MSTA LTR MaLR 2 390 -38 2228 117 3 0 chr5 125652638 125652946 -77432586 - AluSc SINE Alu 0 309 1 2377 140 40 26 chr5 125652946 125652986 -77432546 + MSTA LTR MaLR 390 428 0 416 293 29 14 chr5 125653058 125653198 -77432334 - MER21B LTR ERV1 -721 142 1 514 282 38 56 chr5 125653203 125653597 -77431935 + L1MEd LINE L1 2357 2743 -3386 880 92 0 0 chr5 125653617 125653726 -77431806 + AluSq/x SINE Alu 1 109 -203 251 175 18 0 chr5 125653726 125653783 -77431749 + Alu SINE Alu 241 298 -2 3215 153 16 32 chr5 125653817 125654380 -77431152 - MLT2B3 LTR ERVL 0 554 1 715 233 121 13 chr5 125654380 125654753 -77430779 + L1MEd LINE L1 2852 3264 -2865 752 261 46 25 chr5 125655148 125655432 -77430100 + L1MEd LINE L1 3260 3549 -2580 484 272 58 10 chr5 125655470 125655676 -77429856 + L1MEd LINE L1 3656 3871 -2258 23 33 0 0 chr5 125656300 125656330 -77429202 + AT_rich Low_complexity Low_complexity 1 30 0 225 343 49 21 chr5 125656424 125656567 -77428965 - L3 LINE CR1 -1 1576 1430 3957 134 24 22 chr5 125657825 125658535 -77426997 - MER50 LTR ERV1 -23 711 1 740 219 99 33 chr5 125658705 125658947 -77426585 - MIR SINE MIR -1 261 4 291 264 66 0 chr5 125658986 125659092 -77426440 + MIR SINE MIR 122 234 -28 291 205 41 16 chr5 125659515 125659637 -77425895 + (TA)n Simple_repeat Simple_repeat 2 126 0 1361 142 138 32 chr5 125659638 125659884 -77425648 + AluJo SINE Alu 29 300 -12 1568 180 16 62 chr5 125660067 125660455 -77425077 + MLT1A2 LTR MaLR 1 370 -4 209 219 0 16 chr5 125660925 125660989 -77424543 + (TA)n Simple_repeat Simple_repeat 1 63 0 225 0 0 0 chr5 125661140 125661165 -77424367 + (TAA)n Simple_repeat Simple_repeat 2 26 0 2361 97 3 0 chr5 125661214 125661523 -77424009 + AluSx SINE Alu 1 310 -2 535 263 144 51 chr5 125661590 125661944 -77423588 + MLT1I LTR MaLR 21 407 -2 225 320 46 39 chr5 125662755 125662908 -77422624 - L2 LINE L2 -291 2981 2828 22 0 0 0 chr5 125663541 125663563 -77421969 + AT_rich Low_complexity Low_complexity 1 22 0 20450 146 29 15 chr5 125664110 125668435 -77417097 - L1MA2 LINE L1 -9 7714 3449 523 67 0 0 chr5 125668435 125668510 -77417022 - L1PA5 LINE L1 0 6154 6080 20450 146 29 15 chr5 125668510 125669300 -77416232 - L1MA2 LINE L1 -4274 3449 2671 249 57 0 0 chr5 125669300 125669335 -77416197 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2193 107 3 10 chr5 125669337 125669628 -77415904 - AluSq SINE Alu -20 293 5 20450 146 29 15 chr5 125669628 125672089 -77413443 - L1MA2 LINE L1 -5052 2671 17 374 290 10 0 chr5 125672241 125672341 -77413191 - L2 LINE L2 -4 3268 3168 282 322 33 11 chr5 125672969 125673059 -77412473 + L2 LINE L2 3146 3237 -35 767 272 47 17 chr5 125673090 125673325 -77412207 + LTR67 LTR ERVL 36 277 -280 187 250 40 169 chr5 125673325 125673449 -77412083 + L2 LINE L2 3032 3139 -133 798 284 76 47 chr5 125673467 125673528 -77412004 - MLT1J2 LTR MaLR 0 450 392 4657 68 9 2 chr5 125673528 125674103 -77411429 + L1PB1 LINE L1 5572 6150 -1 798 284 76 47 chr5 125674103 125674421 -77411111 - MLT1J2 LTR MaLR -58 392 60 777 157 12 14 chr5 125674464 125674730 -77410802 + AluJb SINE Alu 2 312 0 284 0 0 27 chr5 125674746 125674783 -77410749 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1988 156 26 29 chr5 125676280 125676495 -77409037 + L1MC3 LINE L1 7370 7584 -201 333 68 0 0 chr5 125676495 125676539 -77408993 + (CA)n Simple_repeat Simple_repeat 2 45 0 1988 156 26 29 chr5 125676539 125676706 -77408826 + L1MC3 LINE L1 7584 7753 -32 1892 88 11 31 chr5 125676706 125676966 -77408566 - AluSq SINE Alu -15 298 44 1988 156 26 29 chr5 125676966 125676999 -77408533 + L1MC3 LINE L1 7753 7785 0 231 181 42 28 chr5 125677953 125678025 -77407507 + MLT1E LTR MaLR 509 581 -12 22 56 0 0 chr5 125678194 125678230 -77407302 + AT_rich Low_complexity Low_complexity 1 36 0 983 232 140 98 chr5 125678253 125678990 -77406542 - LTR41 LTR ERVL -5 768 1 1895 260 57 45 chr5 125679182 125679668 -77405864 - MLT2F LTR ERVL -5 658 161 1414 206 84 40 chr5 125679668 125680047 -77405485 + MSTD LTR MaLR 1 396 0 1895 260 57 45 chr5 125680047 125680210 -77405322 - MLT2F LTR ERVL -502 161 1 26 93 0 0 chr5 125680535 125680610 -77404922 + AT_rich Low_complexity Low_complexity 1 75 0 2438 83 0 0 chr5 125681057 125681357 -77404175 + AluSx SINE Alu 1 300 -12 1835 158 7 0 chr5 125681442 125681720 -77403812 + AluJb SINE Alu 1 280 -32 32 0 0 0 chr5 125681733 125681765 -77403767 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 125681890 125681918 -77403614 + AT_rich Low_complexity Low_complexity 1 28 0 1834 106 120 14 chr5 125682533 125682808 -77402724 - AluSx SINE Alu -8 304 1 1801 144 0 38 chr5 125683001 125683314 -77402218 - AluJb SINE Alu -11 301 1 211 303 152 10 chr5 125683393 125683492 -77402040 - L2 LINE L2 -2 3270 3158 631 274 106 22 chr5 125683854 125684080 -77401452 + MIR SINE MIR 2 246 -16 823 179 71 58 chr5 125684208 125684448 -77401084 - L1MB7 LINE L1 -10 6174 5932 239 180 0 0 chr5 125684492 125684542 -77400990 - L1MA8 LINE L1 -239 6052 6003 204 268 18 0 chr5 125684706 125684762 -77400770 + L2 LINE L2 3190 3246 -67 769 239 26 84 chr5 125684816 125684882 -77400650 + MER102a DNA MER1_type 1 69 -1348 1897 117 48 0 chr5 125684882 125685155 -77400377 - AluY SINE Alu -25 286 1 769 239 26 84 chr5 125685155 125685435 -77400097 + MER102a DNA MER1_type 69 327 -3 1392 224 23 0 chr5 125687036 125687335 -77398197 - AluJo SINE Alu 0 312 7 2246 183 26 53 chr5 125688360 125688851 -77396681 + MLT1D LTR MaLR 21 498 -7 309 314 145 0 chr5 125689012 125689184 -77396348 - MIR SINE MIR -42 220 24 193 211 53 53 chr5 125689777 125689834 -77395698 + L2 LINE L2 3208 3264 -8 466 299 35 29 chr5 125692880 125693054 -77392478 + MIR SINE MIR 30 204 -58 1725 78 0 0 chr5 125693939 125694156 -77391376 - AluY SINE Alu 0 311 95 193 306 28 0 chr5 125694242 125694314 -77391218 - MIR SINE MIR -71 191 118 1339 168 0 43 chr5 125694315 125694547 -77390985 + AluSx SINE Alu 1 222 -90 931 108 13 45 chr5 125694736 125694893 -77390639 - MER20 DNA MER1_type -36 183 32 266 331 171 11 chr5 125695697 125695978 -77389554 - L3 LINE CR1 -409 1168 843 853 168 123 7 chr5 125697066 125697221 -77388311 + FRAM SINE Alu 1 172 -4 208 288 61 0 chr5 125697691 125697757 -77387775 + MIR SINE MIR 72 141 -121 228 321 127 6 chr5 125697927 125698092 -77387440 - L3 LINE CR1 -405 1172 988 180 77 0 0 chr5 125698408 125698434 -77387098 + (CA)n Simple_repeat Simple_repeat 1 26 0 201 318 16 0 chr5 125698877 125698940 -77386592 - L2 LINE L2 -6 3266 3203 818 148 0 0 chr5 125699085 125699207 -77386325 - AluSc SINE Alu -16 293 172 251 323 15 0 chr5 125699247 125699312 -77386220 + L2 LINE L2 3203 3268 -4 181 264 38 38 chr5 125700053 125700106 -77385426 - MIR SINE MIR -62 146 94 320 274 97 0 chr5 125700826 125700950 -77384582 - L1ME4a LINE L1 0 6121 5986 443 244 114 0 chr5 125704386 125704509 -77381023 - L2 LINE L2 -9 3304 3168 293 279 91 125 chr5 125704631 125705193 -77380339 - L2 LINE L2 -516 2798 2256 274 307 0 0 chr5 125705834 125705909 -77379623 + MER112 DNA MER1_type 182 256 -4 1477 156 87 35 chr5 125706830 125707119 -77378413 + AluJo SINE Alu 3 306 -6 337 216 128 34 chr5 125707169 125707317 -77378215 - L1P3 LINE L1 -348 5824 5663 202 256 47 58 chr5 125707964 125708050 -77377482 - L2 LINE L2 -47 3266 3182 22 0 0 0 chr5 125708240 125708262 -77377270 + AT_rich Low_complexity Low_complexity 1 22 0 248 279 116 0 chr5 125708629 125708783 -77376749 + L1 LINE L1 5215 5397 -749 1835 167 3 7 chr5 125710062 125710356 -77375176 + AluSx SINE Alu 1 293 -19 1789 180 10 0 chr5 125713787 125714082 -77371450 + AluJo SINE Alu 1 298 -14 497 333 126 11 chr5 125714584 125714932 -77370600 - L3b LINE CR1 -2 1581 1194 219 146 0 0 chr5 125714969 125715010 -77370522 + (T)n Simple_repeat Simple_repeat 1 41 0 837 181 7 26 chr5 125716913 125717068 -77368464 + FRAM SINE Alu 2 153 -23 21 36 0 0 chr5 125717071 125717099 -77368433 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr5 125717133 125717156 -77368376 + (A)n Simple_repeat Simple_repeat 1 23 0 613 241 43 19 chr5 125718159 125718321 -77367211 - L2 LINE L2 0 3272 3107 390 319 185 8 chr5 125718536 125718909 -77366623 - L2 LINE L2 -416 2898 2460 1231 192 23 102 chr5 125719575 125719966 -77365566 + MLT1A2 LTR MaLR 11 370 -4 20359 33 0 0 chr5 125721156 125724281 -77361251 + L1PA4 LINE L1 3020 6152 -3 1008 115 0 0 chr5 125724385 125724524 -77361008 + AluSg/x SINE Alu 155 293 -17 458 288 78 22 chr5 125724563 125725101 -77360431 - L1MC/D LINE L1 -748 5398 4973 1121 277 120 13 chr5 125725719 125726228 -77359304 - L2 LINE L2 -5 3308 2759 982 301 48 75 chr5 125726250 125726960 -77358572 + L2 LINE L2 1789 2479 -835 25237 40 4 3 chr5 125727173 125730197 -77355335 - L1P LINE L1 -3107 3039 13 21 0 0 0 chr5 125730983 125731004 -77354528 + AT_rich Low_complexity Low_complexity 1 21 0 1733 201 0 0 chr5 125731139 125731448 -77354084 + AluJo SINE Alu 1 309 -3 252 264 47 66 chr5 125731834 125731940 -77353592 - MIR SINE MIR -72 136 33 2408 214 25 6 chr5 125732963 125733513 -77352019 + L1MB8 LINE L1 4566 5126 -1020 1293 165 37 16 chr5 125733526 125733768 -77351764 + L1MB8 LINE L1 5929 6175 -3 488 270 102 20 chr5 125733835 125734031 -77351501 + MIR SINE MIR 49 260 -2 24 32 0 0 chr5 125734123 125734154 -77351378 + AT_rich Low_complexity Low_complexity 1 31 0 809 302 48 15 chr5 125734229 125734560 -77350972 + L1MEc LINE L1 61 402 -5994 908 205 148 13 chr5 125734571 125734869 -77350663 + L1MEc LINE L1 625 962 -5434 232 308 158 8 chr5 125734918 125735051 -77350481 - MIR3 SINE MIR -55 153 1 * 1259 298 64 13 chr5 125735051 125735515 -77350017 - L2 LINE L2 -585 2729 2242 1950 199 56 20 chr5 125735854 125736302 -77349230 + L1ME1 LINE L1 5680 6143 -23 1358 204 188 93 chr5 125737218 125737613 -77347919 + HsTC2a DNA MER2_type 1 357 -1543 1836 157 7 7 chr5 125737613 125737919 -77347613 - AluJb SINE Alu -6 306 1 1358 204 188 93 chr5 125737919 125738199 -77347333 + HsTC2a DNA MER2_type 357 740 -4 27 0 0 0 chr5 125738245 125738272 -77347260 + AT_rich Low_complexity Low_complexity 1 27 0 2456 81 0 7 chr5 125738299 125738606 -77346926 + AluSg SINE Alu 1 305 -5 4625 175 57 8 chr5 125738614 125739572 -77345960 - L1MB7 LINE L1 -9 6175 5172 2976 200 34 30 chr5 125739758 125740524 -77345008 - L1M4 LINE L1 -895 5251 4483 280 160 96 21 chr5 125740578 125740672 -77344860 + L1ME4a LINE L1 6008 6108 -13 22 56 0 0 chr5 125740686 125740722 -77344810 + AT_rich Low_complexity Low_complexity 1 36 0 3809 93 0 127 chr5 125740728 125741381 -77344151 + L1PA13 LINE L1 5588 6157 -6 657 325 37 27 chr5 125741485 125741783 -77343749 - L2 LINE L2 -3 3310 3010 436 314 72 55 chr5 125742431 125742835 -77342697 + MLT1J LTR MaLR 11 421 -90 2015 123 7 0 chr5 125743653 125743946 -77341586 + AluSx SINE Alu 2 296 -16 25 0 0 0 chr5 125744238 125744263 -77341269 + AT_rich Low_complexity Low_complexity 1 25 0 371 163 0 12 chr5 125745417 125745503 -77340029 + (CCG)n Simple_repeat Simple_repeat 2 86 0 396 292 17 8 chr5 125746323 125746443 -77339089 + MIR SINE MIR 142 262 0 * 477 297 87 0 chr5 125746435 125746573 -77338959 - MIR SINE MIR -107 155 6 928 245 202 62 chr5 125746676 125747161 -77338371 + MLT1H1 LTR MaLR 3 555 0 1823 120 65 4 chr5 125747301 125747576 -77337956 + MSTC LTR MaLR 136 427 -1 5952 249 89 40 chr5 125747578 125748931 -77336601 + MSTC-int LTR MaLR 1 1452 -283 2846 7 0 3 chr5 125748931 125749240 -77336292 + AluYa5 SINE Alu 1 308 -3 5952 249 89 40 chr5 125749240 125749539 -77335993 + MSTC-int LTR MaLR 1452 1735 0 2268 156 103 5 chr5 125749539 125749929 -77335603 + MSTC LTR MaLR 1 428 0 36 70 0 0 chr5 125750020 125750091 -77335441 + AT_rich Low_complexity Low_complexity 1 71 0 1760 96 92 29 chr5 125751100 125751381 -77334151 + AluSx SINE Alu 1 299 -13 1790 191 55 14 chr5 125751826 125752193 -77333339 - MSTD LTR MaLR 0 396 15 30 27 0 0 chr5 125752345 125752382 -77333150 + AT_rich Low_complexity Low_complexity 1 37 0 767 273 97 77 chr5 125752416 125752602 -77332930 - LTR16A LTR ERVL 0 450 269 1538 214 47 100 chr5 125752602 125753131 -77332401 - MLT1D LTR MaLR -2 503 3 767 273 97 77 chr5 125753131 125753347 -77332185 - LTR16A LTR ERVL -181 269 40 15208 158 13 7 chr5 125753383 125757154 -77328378 - L1MA3 LINE L1 0 7724 3930 21230 131 39 16 chr5 125757257 125760645 -77324887 - L1MA3 LINE L1 -4093 3472 10 274 208 0 0 chr5 125760648 125760696 -77324836 - LTR16A LTR ERVL -402 48 1 960 132 0 22 chr5 125760802 125760938 -77324594 - FLAM_C SINE Alu 0 133 1 217 250 92 26 chr5 125761040 125761116 -77324416 + MIR SINE MIR 130 210 -52 403 223 0 121 chr5 125761760 125761917 -77323615 - MER112 DNA MER1_type -1 259 122 3084 163 68 15 chr5 125761917 125762571 -77322961 + Tigger7 DNA MER2_type 1 2565 -22 242 256 139 0 chr5 125763304 125763390 -77322142 + L1ME2 LINE L1 6057 6154 -10 * 358 216 85 85 chr5 125763380 125763496 -77322036 + L1MC5 LINE L1 7764 7882 -79 2342 106 0 0 chr5 125763496 125763797 -77321735 - AluSx SINE Alu -11 301 1 358 216 85 85 chr5 125763797 125763833 -77321699 + L1MC5 LINE L1 7881 7916 -45 1617 89 16 44 chr5 125764303 125764370 -77321162 + AluSg/x SINE Alu 70 137 -175 2153 99 3 10 chr5 125764370 125764685 -77320847 + AluSc SINE Alu 1 309 0 1617 89 16 44 chr5 125764685 125764865 -77320667 + AluSg/x SINE Alu 137 310 -2 564 299 34 11 chr5 125764877 125765054 -77320478 + MIR SINE MIR 17 197 -65 422 227 159 15 chr5 125765077 125765209 -77320323 - MIR SINE MIR -111 151 1 225 226 32 0 chr5 125768059 125768121 -77317411 - LTR33 LTR ERVL -417 104 41 3756 158 136 15 chr5 125768827 125769604 -77315928 + MER4D LTR ERV1 1 871 -32 272 301 37 59 chr5 125770614 125770750 -77314782 + MIR3 SINE MIR 42 174 -34 228 260 21 52 chr5 125770844 125770940 -77314592 + MIR SINE MIR 18 110 -152 549 322 11 0 chr5 125772188 125772365 -77313167 + MIR SINE MIR 84 262 0 653 156 10 177 chr5 125772382 125772574 -77312958 - FRAM SINE Alu -4 162 3 473 337 140 0 chr5 125772614 125772893 -77312639 + L2 LINE L2 2575 2892 -422 197 287 20 0 chr5 125773066 125773167 -77312365 + GA-rich Low_complexity Low_complexity 3 105 0 237 241 0 19 chr5 125773268 125773322 -77312210 + GA-rich Low_complexity Low_complexity 1 53 0 1957 121 0 14 chr5 125773572 125773877 -77311655 + AluSx SINE Alu 6 306 0 429 232 42 0 chr5 125773921 125774016 -77311516 - MER58C DNA MER1_type -2 213 115 11590 76 10 5 chr5 125774025 125776353 -77309179 - L1PA7 LINE L1 -7 6147 3811 1878 131 33 0 chr5 125776355 125776507 -77309025 - AluSx SINE Alu -28 284 118 279 0 0 0 chr5 125776507 125776538 -77308994 + (TG)n Simple_repeat Simple_repeat 2 32 0 1878 131 33 0 chr5 125776538 125776660 -77308872 - AluSx SINE Alu -194 118 1 351 327 0 0 chr5 125776663 125776764 -77308768 - MER58C DNA MER1_type -114 101 1 398 221 150 0 chr5 125777394 125777507 -77308025 - MIR SINE MIR -71 191 62 5653 172 39 16 chr5 125777744 125779228 -77306304 + L1PA16 LINE L1 4126 5638 -528 1649 100 31 23 chr5 125779228 125779487 -77306045 + L1PA16 LINE L1 5904 6164 -2 23 54 0 0 chr5 125779932 125779969 -77305563 + AT_rich Low_complexity Low_complexity 1 37 0 385 145 0 0 chr5 125780029 125780091 -77305441 - MIR3 SINE MIR -21 187 126 25 31 0 0 chr5 125780152 125780184 -77305348 + AT_rich Low_complexity Low_complexity 1 32 0 217 305 121 21 chr5 125781734 125781875 -77303657 + L3b LINE CR1 1132 1286 -297 181 250 0 62 chr5 125783903 125783967 -77301565 - MIR SINE MIR -83 179 120 2165 80 62 0 chr5 125783967 125784243 -77301289 + AluSp SINE Alu 1 293 -20 195 42 0 0 chr5 125784243 125784267 -77301265 + (GGAA)n Simple_repeat Simple_repeat 1 24 0 781 219 141 105 chr5 125784320 125784820 -77300712 - MLT1H LTR MaLR -4 545 24 2221 149 22 14 chr5 125784820 125785182 -77300350 + MLT1A1 LTR MaLR 1 365 0 781 219 141 105 chr5 125785182 125785205 -77300327 - MLT1H LTR MaLR -525 24 3 200 143 24 0 chr5 125785795 125785837 -77299695 + (CA)n Simple_repeat Simple_repeat 2 44 0 2245 99 3 3 chr5 125786345 125786639 -77298893 + AluSp SINE Alu 1 294 -19 1592 156 0 0 chr5 125786684 125786921 -77298611 - AluJo SINE Alu -75 237 1 266 322 28 63 chr5 125787826 125787969 -77297563 + L2 LINE L2 3133 3270 -2 331 207 35 86 chr5 125788044 125788075 -77297457 - MIR SINE MIR -79 183 152 860 258 52 24 chr5 125788075 125788404 -77297128 - MER46C DNA MER2_type 0 338 1 331 207 35 86 chr5 125788404 125788488 -77297044 - MIR SINE MIR -110 152 74 21 0 0 0 chr5 125788596 125788617 -77296915 + AT_rich Low_complexity Low_complexity 1 21 0 1222 162 28 85 chr5 125788831 125788982 -77296550 - MER46A DNA MER2_type -2497 234 76 2219 86 0 46 chr5 125788982 125789286 -77296246 - AluY SINE Alu -21 290 1 1222 162 28 85 chr5 125789286 125789298 -77296234 - MER46A DNA MER2_type -2655 76 65 400 19 0 19 chr5 125789298 125789352 -77296180 - L1PA6 LINE L1 0 6154 6102 1222 162 28 85 chr5 125789352 125789434 -77296098 - MER46A DNA MER2_type -2666 65 2 5949 99 109 123 chr5 125789478 125791064 -77294468 + pTR5 LTR ERV1 743 2438 0 414 0 0 0 chr5 125791650 125791696 -77293836 + (TG)n Simple_repeat Simple_repeat 1 46 0 2260 97 0 17 chr5 125791768 125792068 -77293464 + AluY SINE Alu 1 295 -16 279 0 0 0 chr5 125792342 125792373 -77293159 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 263 188 0 chr5 125893894 125893974 -77191558 + L2 LINE L2 3203 3297 -16 667 231 68 59 chr5 125894006 125894227 -77191305 + MER58A DNA MER1_type 2 224 0 30 27 0 0 chr5 125894469 125894506 -77191026 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 125894538 125894561 -77190971 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 125895730 125895752 -77189780 + AT_rich Low_complexity Low_complexity 1 22 0 724 270 95 65 chr5 125895801 125896654 -77188878 + L1ME4a LINE L1 5150 6032 -89 1747 182 0 19 chr5 125896996 125897304 -77188228 + AluJb SINE Alu 1 302 -10 537 333 87 47 chr5 125897778 125898164 -77187368 - L2 LINE L2 -622 2692 2270 2008 99 0 0 chr5 125898164 125898427 -77187105 + AluSg SINE Alu 39 301 -9 537 333 87 47 chr5 125898427 125898661 -77186871 - L2 LINE L2 -1044 2270 2047 7956 108 78 2 chr5 125898685 125899894 -77185638 + HSMAR2 DNA Mariner 3 1302 0 186 267 187 0 chr5 125899972 125900047 -77185485 + L2 LINE L2 3150 3238 -34 * 334 323 114 25 chr5 125900036 125900194 -77185338 - MER91B DNA MER1_type -5 185 14 294 321 36 74 chr5 125900289 125900501 -77185031 - MIR3 SINE MIR -56 206 4 23 0 0 0 chr5 125900671 125900694 -77184838 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr5 125900926 125900957 -77184575 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2216 102 0 0 chr5 125900958 125901251 -77184281 - AluSg SINE Alu -17 293 1 390 21 0 0 chr5 125901437 125901484 -77184048 + (TG)n Simple_repeat Simple_repeat 2 48 0 195 69 0 0 chr5 125901747 125901776 -77183756 + (TG)n Simple_repeat Simple_repeat 2 30 0 379 334 75 68 chr5 125902103 125902516 -77183016 + L2 LINE L2 2897 3312 -1 24 0 0 0 chr5 125902817 125902841 -77182691 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 125903052 125903080 -77182452 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 125903683 125903715 -77181817 + AT_rich Low_complexity Low_complexity 1 32 0 2127 113 7 3 chr5 125904298 125904599 -77180933 - AluSx SINE Alu -10 302 1 207 0 0 0 chr5 125906889 125906912 -77178620 + (TA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 125907771 125907799 -77177733 + AT_rich Low_complexity Low_complexity 1 28 0 23674 166 30 25 chr5 125907839 125909559 -77175973 - L1PA11 LINE L1 -1 7611 5901 1971 124 0 17 chr5 125909559 125909885 -77175647 - AluSx SINE Alu 0 321 1 23674 166 30 25 chr5 125909885 125910136 -77175396 - L1PA11 LINE L1 -1711 5901 5653 1898 145 3 10 chr5 125910136 125910432 -77175100 - AluSx SINE Alu -14 298 5 23674 166 30 25 chr5 125910432 125914669 -77170863 - L1PA11 LINE L1 -1959 5653 10 1447 296 170 19 chr5 125914743 125915707 -77169825 - L2 LINE L2 0 3313 2190 22 35 0 0 chr5 125916447 125916476 -77169056 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr5 125916667 125916700 -77168832 + AT_rich Low_complexity Low_complexity 1 33 0 1757 183 0 3 chr5 125916838 125917153 -77168379 - AluJb SINE Alu 0 312 1 301 298 159 54 chr5 125917167 125917519 -77168013 - L1M4 LINE L1 -1604 4542 4154 237 83 0 0 chr5 125917646 125917682 -77167850 + (TG)n Simple_repeat Simple_repeat 2 37 0 847 193 0 31 chr5 125917682 125917843 -77167689 - FRAM SINE Alu -20 156 1 270 0 0 0 chr5 125917850 125917880 -77167652 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 499 301 139 53 chr5 125917901 125918745 -77166787 - L1M4 LINE L1 -2208 3938 3023 1142 175 101 73 chr5 125919404 125919759 -77165773 - MLT1A1 LTR MaLR 0 365 1 361 316 77 93 chr5 125920059 125920594 -77164938 + L2 LINE L2 1818 2343 -971 26 0 0 0 chr5 125920719 125920745 -77164787 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5 125921269 125921302 -77164230 + AT_rich Low_complexity Low_complexity 1 33 0 241 313 40 20 chr5 125921673 125921772 -77163760 - L2 LINE L2 -51 3262 3162 253 241 50 47 chr5 125922660 125922828 -77162704 + L1MC5 LINE L1 7711 7886 -140 2334 86 10 0 chr5 125922959 125923263 -77162269 - AluSg SINE Alu -1 309 3 301 238 130 0 chr5 125923272 125923406 -77162126 - L1MC5 LINE L1 -547 7495 7268 400 292 47 76 chr5 125923467 125923638 -77161894 - MIR3 SINE MIR -11 197 32 1492 170 26 36 chr5 125924257 125924563 -77160969 - AluJo SINE Alu -9 303 1 380 243 66 0 chr5 125924951 125924968 -77160564 - L1MA10 LINE L1 0 6334 6318 2710 194 63 77 chr5 125924968 125926337 -77159195 - L1ME2 LINE L1 -9 6224 4867 189 0 0 0 chr5 125926337 125926358 -77159174 + (TC)n Simple_repeat Simple_repeat 2 22 0 2710 194 63 77 chr5 125926358 125926370 -77159162 - L1ME2 LINE L1 -1366 4867 4856 575 123 40 15 chr5 125926371 125926771 -77158761 + (TA)n Simple_repeat Simple_repeat 1 410 0 575 126 49 13 chr5 125926788 125927065 -77158467 + (TA)n Simple_repeat Simple_repeat 1 286 0 1865 225 59 14 chr5 125927094 125927797 -77157735 - L1ME2 LINE L1 -1349 4866 4098 919 228 92 4 chr5 125927782 125928081 -77157451 - L1 LINE L1 -2273 3942 3601 * 288 24 0 24 chr5 125928081 125928122 -77157410 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 2105 105 0 7 chr5 125928122 125928408 -77157124 - AluSx SINE Alu -1 324 1 400 245 116 32 chr5 125928408 125928563 -77156969 - L1ME2 LINE L1 -4421 1975 1808 669 241 61 76 chr5 125928644 125928892 -77156640 - L1ME2 LINE L1 -5130 1266 1016 285 29 0 0 chr5 125928892 125928926 -77156606 + (TA)n Simple_repeat Simple_repeat 2 35 0 1566 180 10 27 chr5 125928931 125929225 -77156307 + AluJo SINE Alu 1 289 -23 669 241 61 76 chr5 125929225 125929380 -77156152 - L1ME2 LINE L1 -5384 1012 863 1062 289 57 38 chr5 125929647 125930205 -77155327 - L1ME2 LINE L1 -5617 779 211 26 64 0 0 chr5 125931120 125931167 -77154365 + AT_rich Low_complexity Low_complexity 1 47 0 288 192 96 0 chr5 125932078 125932151 -77153381 - MIR SINE MIR -109 153 74 21 0 0 0 chr5 125932344 125932365 -77153167 + AT_rich Low_complexity Low_complexity 1 21 0 261 221 0 0 chr5 125933681 125933749 -77151783 + CT-rich Low_complexity Low_complexity 3 70 0 32 26 0 0 chr5 125934966 125935005 -77150527 + AT_rich Low_complexity Low_complexity 1 39 0 1728 149 19 38 chr5 125935393 125935709 -77149823 - AluJo SINE Alu -2 310 1 25 0 0 0 chr5 125935718 125935743 -77149789 + AT_rich Low_complexity Low_complexity 1 25 0 182 262 131 74 chr5 125936139 125936261 -77149271 - MER5A DNA MER1_type -1 188 60 300 364 73 6 chr5 125936471 125936636 -77148896 + MIR SINE MIR 32 207 -55 898 63 87 0 chr5 125937399 125937526 -77148006 + MER85 DNA T2_type 2 139 0 1841 173 10 0 chr5 125938839 125939128 -77146404 - AluJb SINE Alu -20 292 1 2325 105 0 0 chr5 125939308 125939603 -77145929 + AluSg SINE Alu 1 295 -15 1813 257 78 38 chr5 125940607 125941238 -77144294 + L2 LINE L2 2304 2959 -355 1404 205 20 29 chr5 125941326 125941677 -77143855 - L1ME1 LINE L1 -25 6141 5794 1674 207 83 23 chr5 125941677 125942397 -77143135 - L1ME1 LINE L1 -663 5579 4817 922 256 29 21 chr5 125942393 125942674 -77142858 + L1MEc LINE L1 285 567 -5829 * 2093 240 35 22 chr5 125942682 125942784 -77142748 + L1MEc LINE L1 2155 2254 -3961 2533 95 22 6 chr5 125942784 125943142 -77142390 + THE1B LTR MaLR 1 364 0 2093 240 35 22 chr5 125943142 125943804 -77141728 + L1MEc LINE L1 2254 2896 -3319 1689 176 69 27 chr5 125944062 125944539 -77140993 + L1 LINE L1 4325 4821 -1394 1310 127 14 35 chr5 125944542 125944895 -77140637 + MSTB1 LTR MaLR 1 432 0 344 319 6 19 chr5 125944895 125945052 -77140480 + L1 LINE L1 4820 4974 -1241 2277 169 40 100 chr5 125945052 125945702 -77139830 + LTR9 LTR ERV1 2 612 0 4511 172 34 21 chr5 125945756 125947217 -77138315 + HUERS-P3 LTR ERV1 243 1993 -5685 3172 124 24 20 chr5 125947224 125947763 -77137769 + HUERS-P3 LTR ERV1 2102 2642 -4776 2388 157 35 2 chr5 125947763 125948190 -77137342 - LTR8 LTR ERV1 -250 441 1 11522 137 20 57 chr5 125948190 125948520 -77137012 + HUERS-P3 LTR ERV1 3073 3414 -4004 2147 130 3 3 chr5 125948520 125948828 -77136704 - AluSx SINE Alu -4 308 1 11522 137 20 57 chr5 125948828 125950831 -77134701 + HUERS-P3 LTR ERV1 3414 5318 -2100 218 338 26 0 chr5 125951762 125951839 -77133693 - MIR3 SINE MIR -29 179 101 2553 182 25 9 chr5 125952276 125952946 -77132586 - MER50 LTR ERV1 0 734 22 2005 121 52 35 chr5 125952948 125953296 -77132236 + THE1B LTR MaLR 11 364 0 2885 126 55 116 chr5 125953320 125954033 -77131499 - LTR34 LTR ERV1 -30 669 1 365 264 11 0 chr5 125954647 125954738 -77130794 + LTR33 LTR ERVL 109 200 -321 522 259 69 77 chr5 125954856 125955308 -77130224 - LTR38 LTR ERV1 -108 448 1 800 198 125 36 chr5 125955318 125955566 -77129966 + LTR33 LTR ERVL 245 514 -7 748 164 14 82 chr5 125955595 125955815 -77129717 - L1MA9 LINE L1 -222 6154 5950 431 193 11 0 chr5 125955815 125955903 -77129629 - L1MA9 LINE L1 -1110 5100 5012 657 229 191 5 chr5 125956131 125956341 -77129191 + MIR SINE MIR 2 250 -12 2291 64 0 7 chr5 125956345 125956627 -77128905 - AluY SINE Alu -5 306 27 5650 142 178 86 chr5 125956627 125958179 -77127353 + pTR5 LTR ERV1 744 2438 0 5147 84 122 1 chr5 125958227 125958964 -77126568 - LTR12 LTR ERV1 0 826 1 4271 97 2 0 chr5 125958964 125959574 -77125958 - HERV9 LTR ERV1 0 8399 7789 338 161 0 0 chr5 125959570 125959632 -77125900 - HERV9 LTR ERV1 -835 7564 7503 * 676 126 172 15 chr5 125959630 125959891 -77125641 - Harlequin LTR ERV1 -5755 1141 840 27259 93 9 5 chr5 125959892 125964894 -77120638 - Harlequin LTR ERV1 -3455 4944 2 5098 88 117 5 chr5 125964895 125965638 -77119894 - LTR12 LTR ERV1 0 826 1 4219 173 55 29 chr5 125965682 125965806 -77119726 - L1MA9 LINE L1 -1183 5027 4908 1951 147 0 17 chr5 125965806 125966106 -77119426 + AluSg SINE Alu 1 295 -15 4219 173 55 29 chr5 125966106 125966713 -77118819 - L1MA9 LINE L1 -1302 4908 4257 180 0 0 0 chr5 125966713 125966733 -77118799 + (TA)n Simple_repeat Simple_repeat 1 20 0 4219 173 55 29 chr5 125966733 125967079 -77118453 - L1MA9 LINE L1 -1953 4257 3921 552 234 238 16 chr5 125967087 125967335 -77118197 - L1MA9 LINE L1 -3663 2547 2245 2370 244 122 35 chr5 125967345 125968092 -77117440 - L1MA9 LINE L1 -5329 812 1 1118 282 89 28 chr5 125968432 125968931 -77116601 + L2 LINE L2 2778 3312 -1 1406 184 21 60 chr5 125969019 125969301 -77116231 - AluJo SINE Alu -41 271 1 2051 111 0 78 chr5 125969824 125970156 -77115376 + AluSx SINE Alu 1 306 -6 25 51 0 0 chr5 125970298 125970337 -77115195 + AT_rich Low_complexity Low_complexity 1 39 0 259 233 42 33 chr5 125970974 125971094 -77114438 + L1 LINE L1 3714 3834 -2312 618 265 123 25 chr5 125971096 125971578 -77113954 + L1MC4 LINE L1 7354 8002 -40 2309 113 0 0 chr5 125971743 125972052 -77113480 + AluSx SINE Alu 1 309 -3 328 274 116 55 chr5 125972106 125972252 -77113280 + HAL1b LINE L1 13 167 -1181 21 0 0 0 chr5 125972381 125972402 -77113130 + AT_rich Low_complexity Low_complexity 1 21 0 467 272 92 16 chr5 125973079 125973263 -77112269 + MIR SINE MIR 50 247 -15 21 0 0 0 chr5 125973590 125973611 -77111921 + AT_rich Low_complexity Low_complexity 1 21 0 744 309 67 49 chr5 125974575 125975006 -77110526 + L2 LINE L2 2286 2724 -590 279 366 40 10 chr5 125975156 125975257 -77110275 + L2 LINE L2 2981 3084 -188 2107 191 31 71 chr5 125975585 125976162 -77109370 + MLT2B3 LTR ERVL 1 554 0 282 299 14 78 chr5 125976279 125976395 -77109137 + L1ME3A LINE L1 5962 6059 -111 846 210 60 0 chr5 125976395 125976562 -77108970 - MER45A DNA AcHobo -1 177 1 282 299 14 78 chr5 125976562 125976662 -77108870 + L1ME3A LINE L1 6059 6164 -6 376 316 24 57 chr5 125976757 125976786 -77108746 + L1MEd LINE L1 1035 1063 -5056 2177 107 0 7 chr5 125976786 125977077 -77108455 + AluSg1 SINE Alu 1 289 -20 376 316 24 57 chr5 125977077 125977256 -77108276 + L1MEd LINE L1 1063 1236 -4883 307 344 18 18 chr5 125977261 125977479 -77108053 + HAL1 LINE L1 1370 1587 -920 860 147 76 60 chr5 125977483 125977734 -77107798 - Charlie1 DNA MER1_type 0 2761 2507 1397 238 45 20 chr5 125977739 125978139 -77107393 + L1M4 LINE L1 396 805 -5737 2050 108 71 11 chr5 125978898 125979250 -77106282 + THE1C LTR MaLR 3 375 0 197 319 0 14 chr5 125979706 125979775 -77105757 - MIR SINE MIR -17 245 178 1708 243 76 39 chr5 125980459 125980948 -77104584 + MLT2B2 LTR ERVL 1 507 -8 6976 221 62 45 chr5 125980954 125982657 -77102875 + MSTD-int LTR MaLR 2 1734 -1 1400 214 138 22 chr5 125982658 125983013 -77102519 + MSTD LTR MaLR 1 396 0 1521 189 93 0 chr5 125983662 125983825 -77101707 - AluJb SINE Alu -6 296 150 198 0 0 0 chr5 125983825 125983847 -77101685 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1521 189 93 0 chr5 125983847 125983953 -77101579 - AluJb SINE Alu -152 150 2 2563 182 18 37 chr5 125983970 125984239 -77101293 - L1MB3 LINE L1 -12 6171 5915 1582 174 14 17 chr5 125984239 125984533 -77100999 - AluJo SINE Alu -19 293 1 2563 182 18 37 chr5 125984533 125984773 -77100759 - L1MB3 LINE L1 -268 5915 5672 1376 191 27 24 chr5 125985689 125985918 -77099614 + AluJo SINE Alu 1 233 -79 3719 70 9 0 chr5 125985918 125986358 -77099174 - MLT2A1 LTR ERVL 0 444 1 1376 191 27 24 chr5 125986358 125986421 -77099111 + AluJo SINE Alu 233 294 -18 31162 76 18 3 chr5 125986424 125991388 -77094144 + L1PA6 LINE L1 1114 6154 0 435 257 37 135 chr5 125991549 125992009 -77093523 - LTR38B LTR ERV1 -13 597 129 522 202 0 35 chr5 125992124 125992238 -77093294 - LTR38B LTR ERV1 -500 110 1 3540 155 49 37 chr5 125992420 125993047 -77092485 - MER41B LTR ERV1 0 635 1 928 276 9 18 chr5 125993378 125993606 -77091926 + MER21B LTR ERV1 3 228 -635 * 1704 169 22 34 chr5 125993586 125993906 -77091626 + MER21B LTR ERV1 537 852 -11 2731 187 53 62 chr5 125994424 125995134 -77090398 - MER4D LTR ERV1 -2 901 98 2180 133 0 0 chr5 125995134 125995443 -77090089 + AluSq SINE Alu 1 309 -4 2731 187 53 62 chr5 125995443 125995482 -77090050 - MER4D LTR ERV1 -805 98 60 1617 168 25 3 chr5 125995466 125995751 -77089781 - MER49 LTR ERV1 -629 294 4 * 824 204 39 22 chr5 125996242 125996423 -77089109 + MLT1A2 LTR MaLR 190 373 -1 1418 221 89 16 chr5 125997036 125997416 -77088116 + LTR40b LTR ERVL 3 410 -52 24 0 0 0 chr5 125997793 125997817 -77087715 + AT_rich Low_complexity Low_complexity 1 24 0 493 213 119 38 chr5 125998791 125998951 -77086581 - MER5B DNA MER1_type -2 176 4 1694 191 156 48 chr5 125999022 125999478 -77086054 + MLT1D LTR MaLR 1 505 0 450 324 109 24 chr5 125999794 126000087 -77085445 - MLT1K LTR MaLR -132 456 139 870 210 60 73 chr5 126000684 126000998 -77084534 - L1MC5 LINE L1 -500 7461 7152 1045 189 166 0 chr5 126001117 126001367 -77084165 - Charlie1b DNA MER1_type -219 304 1 273 365 25 60 chr5 126001367 126001652 -77083880 - HAL1 LINE L1 -2045 462 188 1475 182 0 0 chr5 126001692 126001939 -77083593 - AluJo SINE Alu -28 284 38 1640 298 45 25 chr5 126001950 126002510 -77083022 + MLT1G LTR MaLR 10 580 -10 312 172 0 0 chr5 126003444 126003502 -77082030 + L1PB1 LINE L1 138 195 -6668 * 15771 184 19 13 chr5 126003497 126005556 -77079976 + L1PB1 LINE L1 1111 3156 -3711 2139 112 0 7 chr5 126005556 126005851 -77079681 + AluSq SINE Alu 16 308 -5 15771 184 19 13 chr5 126005851 126009097 -77076435 + L1PB1 LINE L1 3156 6512 -355 375 23 0 0 chr5 126009097 126009141 -77076391 + (CA)n Simple_repeat Simple_repeat 2 45 0 15771 184 19 13 chr5 126009141 126009498 -77076034 + L1PB1 LINE L1 6512 6865 -2 1726 179 0 29 chr5 126009992 126010133 -77075399 + AluJo SINE Alu 1 145 -167 2497 75 0 3 chr5 126010133 126010438 -77075094 + AluY SINE Alu 1 304 -7 1726 179 0 29 chr5 126010438 126010609 -77074923 + AluJo SINE Alu 145 304 -8 333 0 0 0 chr5 126011376 126011413 -77074119 + (TG)n Simple_repeat Simple_repeat 2 38 0 283 278 96 17 chr5 126011415 126011530 -77074002 + MER34B LTR ERV1 1 124 -441 562 270 45 55 chr5 126011613 126011902 -77073630 + MER34B LTR ERV1 279 564 -1 212 171 0 0 chr5 126011915 126011956 -77073576 + T-rich Low_complexity Low_complexity 1 41 0 341 250 92 116 chr5 126011985 126012277 -77073255 + MLT1J LTR MaLR 226 510 -1 4520 130 23 47 chr5 126013121 126013866 -77071666 + LTR8A LTR ERV1 1 727 0 4286 111 14 2 chr5 126014384 126014942 -77070590 - MER61E LTR ERV1 -4 565 1 23 68 0 0 chr5 126015468 126015512 -77070020 + AT_rich Low_complexity Low_complexity 1 44 0 285 29 0 0 chr5 126018465 126018499 -77067033 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 2324 230 69 13 chr5 126019541 126020093 -77065439 + MER119 DNA MER1_type 1 583 0 806 291 84 43 chr5 126020098 126020376 -77065156 + L2 LINE L2 2880 3182 -131 204 45 23 45 chr5 126020376 126020420 -77065112 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 806 291 84 43 chr5 126020420 126020557 -77064975 + L2 LINE L2 3182 3312 -1 586 200 19 0 chr5 126020850 126020955 -77064577 + Tigger3(Golem) DNA MER2_type 2 108 -2921 3837 112 84 39 chr5 126020955 126021226 -77064306 + Tigger3(Golem) DNA MER2_type 2285 2542 -487 1939 132 7 7 chr5 126021226 126021514 -77064018 - AluSx SINE Alu -24 288 1 3837 112 84 39 chr5 126021514 126021954 -77063578 + Tigger3(Golem) DNA MER2_type 2542 3028 -1 1822 243 129 37 chr5 126022189 126022732 -77062800 - MLT1E LTR MaLR 0 593 1 696 186 59 0 chr5 126023645 126023763 -77061769 + FLAM_C SINE Alu 2 126 -7 781 203 68 6 chr5 126024751 126024928 -77060604 - MER5A DNA MER1_type 0 189 2 439 294 72 10 chr5 126025388 126025582 -77059950 + L2 LINE L2 3107 3312 -1 385 211 48 48 chr5 126026643 126026747 -77058785 - MER20B DNA MER1_type -48 171 68 365 189 40 0 chr5 126027283 126027357 -77058175 - MER116 DNA Mariner -3 77 1 1981 144 7 0 chr5 126077422 126077727 -77007805 + AluJb SINE Alu 2 308 -4 409 286 87 31 chr5 126077734 126077895 -77007637 + HAL1b LINE L1 1179 1348 0 441 81 0 0 chr5 126078455 126078517 -77007015 + (TCCCC)n Simple_repeat Simple_repeat 1 62 0 812 196 0 0 chr5 126078517 126078655 -77006877 - FRAM SINE Alu -16 160 23 298 281 14 76 chr5 126079142 126079352 -77006180 - L1M4 LINE L1 -2159 3987 3791 4064 143 94 18 chr5 126079992 126081382 -77004150 - pTR5 LTR ERV1 0 2606 1524 2477 54 30 0 chr5 126081411 126081708 -77003824 - AluY SINE Alu -5 306 1 1054 184 28 23 chr5 126081774 126081992 -77003540 - MER20 DNA MER1_type 0 219 1 27 62 0 0 chr5 126082100 126082148 -77003384 + AT_rich Low_complexity Low_complexity 1 48 0 467 334 131 16 chr5 126082223 126082726 -77002806 - L1 LINE L1 -1099 5047 4487 2087 117 16 31 chr5 126082758 126083075 -77002457 - AluSx SINE Alu 0 312 1 4927 128 61 11 chr5 126083946 126084797 -77000735 + MER4D LTR ERV1 1 894 -9 785 209 240 3 chr5 126085210 126085535 -76999997 - LTR50 LTR ERVL -377 418 17 1576 219 34 34 chr5 126085655 126086152 -76999380 + L1ME3 LINE L1 4776 5272 -874 2344 227 24 48 chr5 126086189 126086904 -76998628 + L1ME3 LINE L1 5422 6119 -43 2303 98 0 3 chr5 126086951 126087257 -76998275 + AluSc SINE Alu 1 305 -4 210 128 0 0 chr5 126087386 126087425 -76998107 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 359 326 130 14 chr5 126088781 126088919 -76996613 - MIR3 SINE MIR -40 168 15 474 292 54 14 chr5 126089189 126089654 -76995878 - L1MEd LINE L1 -4734 2388 1862 691 203 0 0 chr5 126090045 126090178 -76995354 + MLT1C LTR MaLR 201 333 -134 1167 198 14 102 chr5 126090178 126090541 -76994991 - MLT1A1 LTR MaLR 0 365 35 714 152 38 8 chr5 126090562 126090694 -76994838 + MLT1C LTR MaLR 332 467 0 267 175 0 0 chr5 126090694 126090751 -76994781 + (TAGG)n Simple_repeat Simple_repeat 3 59 0 22 0 0 0 chr5 126091309 126091331 -76994201 + AT_rich Low_complexity Low_complexity 1 22 0 226 175 123 0 chr5 126091979 126092036 -76993496 + LTR39 LTR ERV1 2 65 -718 1227 231 33 10 chr5 126092139 126092538 -76992994 + L1M4 LINE L1 2283 2690 -3456 * 1241 270 58 80 chr5 126092533 126092773 -76992759 - L1MEd LINE L1 -5074 1349 1105 2220 133 30 25 chr5 126092773 126093135 -76992397 - THE1B LTR MaLR 0 364 1 1241 270 58 80 chr5 126093135 126093605 -76991927 - L1MEd LINE L1 -5318 1105 655 1032 269 33 6 chr5 126093992 126094352 -76991180 - L1MEd LINE L1 -6038 385 16 195 100 0 0 chr5 126095355 126095385 -76990147 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 194 257 0 71 chr5 126095515 126095585 -76989947 - L2 LINE L2 -21 3251 3187 951 341 182 21 chr5 126096010 126096164 -76989368 + L2 LINE L2 2033 2161 -1111 1990 114 7 10 chr5 126096164 126096461 -76989071 - AluSx SINE Alu -16 296 1 951 341 182 21 chr5 126096461 126097370 -76988162 + L2 LINE L2 2161 3272 0 186 71 0 0 chr5 126097886 126097914 -76987618 + (TAA)n Simple_repeat Simple_repeat 2 29 0 705 229 71 0 chr5 126097932 126098102 -76987430 - MIR SINE MIR -28 234 53 252 0 0 0 chr5 126099014 126099042 -76986490 + (CA)n Simple_repeat Simple_repeat 2 29 0 1065 185 124 54 chr5 126099760 126100187 -76985345 - LTR37B LTR ERV1 -5 463 7 258 353 17 8 chr5 126100562 126100681 -76984851 + MIR SINE MIR 5 124 -138 2320 99 3 0 chr5 126100682 126100984 -76984548 - AluSq SINE Alu -10 303 1 2162 187 52 2 chr5 126101116 126101522 -76984010 - MSTB LTR MaLR 0 426 1 369 237 0 0 chr5 126101814 126101890 -76983642 - MER58 DNA MER1_type 0 2420 2345 459 340 11 27 chr5 126101896 126102081 -76983451 + L3 LINE CR1 1001 1182 -395 557 211 8 38 chr5 126102085 126102138 -76983394 + MER94 DNA DNA 6 59 -75 1251 225 108 12 chr5 126102138 126102565 -76982967 + LTR37B LTR ERV1 1 468 0 557 211 8 38 chr5 126102565 126102644 -76982888 + MER94 DNA DNA 59 134 0 213 211 0 39 chr5 126102645 126102697 -76982835 + L3 LINE CR1 1175 1224 -353 1346 163 156 25 chr5 126103146 126103581 -76981951 + LTR54B LTR ERV1 1 492 -6 2053 203 67 65 chr5 126103976 126104651 -76980881 - LTR8 LTR ERV1 0 691 16 304 216 104 97 chr5 126106569 126106703 -76978829 + HAL1 LINE L1 1897 2031 -476 552 255 26 13 chr5 126106730 126106883 -76978649 + L2 LINE L2 3158 3312 -1 21 0 0 0 chr5 126107003 126107024 -76978508 + AT_rich Low_complexity Low_complexity 1 21 0 37 62 0 0 chr5 126107062 126107127 -76978405 + AT_rich Low_complexity Low_complexity 1 65 0 2967 151 25 25 chr5 126107310 126107907 -76977625 - L1MA8 LINE L1 0 6291 5695 534 243 55 66 chr5 126107930 126108202 -76977330 + HAL1 LINE L1 2236 2504 -3 3725 100 2 6 chr5 126108280 126108792 -76976740 + MER9 LTR ERVK 1 510 -1 4368 84 0 3 chr5 126108793 126109387 -76976145 + HERVK9 LTR ERVK 1 592 -5324 11814 62 0 0 chr5 126109387 126110906 -76974626 + HERVK9 LTR ERVK 1268 2786 -3130 1790 44 4 0 chr5 126110908 126111136 -76974396 + HERVK9 LTR ERVK 3713 3941 -1975 5973 108 12 0 chr5 126111202 126112079 -76973453 + HERVK9 LTR ERVK 4747 5634 -282 2298 96 13 12 chr5 126112104 126112457 -76973075 + HERVK9 LTR ERVK 5635 5916 0 3705 100 0 17 chr5 126112457 126112977 -76972555 + MER9 LTR ERVK 1 511 0 646 291 85 37 chr5 126114004 126114382 -76971150 + LTR16C LTR ERVL 96 491 0 192 268 14 28 chr5 126114854 126114925 -76970607 - MIR SINE MIR -149 113 44 23 0 0 0 chr5 126115269 126115292 -76970240 + AT_rich Low_complexity Low_complexity 1 23 0 225 239 22 0 chr5 126115764 126115810 -76969722 - MIR3 SINE MIR -15 193 147 339 61 20 0 chr5 126115926 126115975 -76969557 + MLT1A1-int LTR MaLR 1686 1735 0 1284 193 95 43 chr5 126115975 126116322 -76969210 + MLT1A1 LTR MaLR 1 365 0 21 57 0 0 chr5 126116647 126116682 -76968850 + AT_rich Low_complexity Low_complexity 1 35 0 186 229 0 0 chr5 126116962 126117032 -76968500 + GA-rich Low_complexity Low_complexity 1 70 0 304 209 152 0 chr5 126117032 126117137 -76968395 - LTR33 LTR ERVL -209 312 192 921 190 25 122 chr5 126117164 126117413 -76968119 + MLT1B LTR MaLR 6 178 -212 1737 185 3 13 chr5 126117413 126117726 -76967806 + AluJb SINE Alu 1 310 -2 921 190 25 122 chr5 126117726 126117921 -76967611 + MLT1B LTR MaLR 178 390 0 345 286 0 0 chr5 126117945 126118029 -76967503 - LTR33 LTR ERVL -377 144 61 207 327 142 18 chr5 126118053 126118166 -76967366 - L2 LINE L2 -1 3312 3186 299 289 115 55 chr5 126118207 126118695 -76966837 - L1MC/D LINE L1 -2027 5781 5265 22 0 0 0 chr5 126119362 126119384 -76966148 + AT_rich Low_complexity Low_complexity 1 22 0 715 190 98 0 chr5 126119439 126119602 -76965930 - MER58A DNA MER1_type 0 224 46 248 268 87 36 chr5 126119639 126119777 -76965755 - MIR3 SINE MIR -60 148 4 2121 155 38 38 chr5 126119931 126120351 -76965181 - MER4E LTR ERV1 0 779 360 21858 116 12 5 chr5 126120362 126120664 -76964868 - L1PA8A LINE L1 -13 6433 6135 2207 124 0 0 chr5 126120664 126120962 -76964570 - AluSg SINE Alu -12 298 1 21858 116 12 5 chr5 126120962 126125063 -76960469 - L1PA8A LINE L1 -311 6135 2003 6191 98 4 22 chr5 126125098 126126050 -76959482 - MER11C LTR ERVK -14 1057 123 6356 212 26 50 chr5 126126050 126128051 -76957481 - L1PA8A LINE L1 -4473 1988 2 1344 127 9 5 chr5 126128055 126128275 -76957257 - MER4B LTR ERV1 -389 221 1 435 193 87 47 chr5 126128571 126128721 -76956811 + MIR SINE MIR 66 221 -41 914 272 16 0 chr5 126129181 126129438 -76956094 + MIR SINE MIR 2 262 0 1701 139 43 21 chr5 126129448 126129728 -76955804 - AluJb SINE Alu -26 286 1 3875 179 44 27 chr5 126130047 126130835 -76954697 - MER21B LTR ERV1 -61 802 1 727 243 128 58 chr5 126131185 126131584 -76953948 + MER50 LTR ERV1 10 436 -298 340 320 91 32 chr5 126131751 126131970 -76953562 + L1M4b LINE L1 1 232 -6627 770 157 17 23 chr5 126131972 126132144 -76953388 - MER53 DNA DNA 0 189 19 2021 183 40 5 chr5 126132720 126133141 -76952391 - L1PA16 LINE L1 -5 6161 5726 247 256 63 63 chr5 126133242 126133274 -76952258 + L1M4b LINE L1 2764 2795 -4164 2265 97 3 0 chr5 126133274 126133564 -76951968 + AluY SINE Alu 1 291 -20 247 256 63 63 chr5 126133564 126133769 -76951763 + L1M4b LINE L1 2794 2955 -4004 432 204 74 6 chr5 126133884 126134046 -76951486 - HAL1b LINE L1 -235 1113 941 357 314 19 6 chr5 126134049 126134205 -76951327 + (TG)n Simple_repeat Simple_repeat 1 158 0 333 281 86 45 chr5 126134286 126134553 -76950979 - HAL1b LINE L1 -847 501 224 268 324 47 6 chr5 126134677 126134847 -76950685 - L1M4 LINE L1 -2258 3888 3712 18247 38 0 0 chr5 126134917 126137917 -76947615 + L1PA4 LINE L1 3154 6152 -3 229 313 65 14 chr5 126138131 126138345 -76947187 - L1M4 LINE L1 -2677 3469 3245 758 206 191 13 chr5 126139649 126139974 -76945558 + LTR50 LTR ERVL 16 442 -353 762 307 76 28 chr5 126141406 126141829 -76943703 - L2 LINE L2 -8 3305 2863 267 356 87 13 chr5 126143286 126143435 -76942097 - L2 LINE L2 -2 3311 3152 272 83 21 0 chr5 126144109 126144157 -76941375 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 382 308 99 12 chr5 126144161 126144333 -76941199 + MIR SINE MIR 61 247 -15 21 71 0 0 chr5 126144398 126144440 -76941092 + AT_rich Low_complexity Low_complexity 1 42 0 5776 115 32 0 chr5 126144443 126145742 -76939790 - L1PA15 LINE L1 -6 6159 4850 3503 223 55 18 chr5 126146050 126148148 -76937384 + L1MCa LINE L1 3 2438 -4307 217 343 29 0 chr5 126148349 126148451 -76937081 + MIR SINE MIR 99 203 -59 2221 112 0 0 chr5 126149713 126150008 -76935524 - AluY SINE Alu -16 295 1 3606 180 22 18 chr5 126151072 126151625 -76933907 + LTR39 LTR ERV1 59 617 -166 1788 150 36 0 chr5 126151625 126151899 -76933633 + AluJb SINE Alu 11 294 -18 3606 180 22 18 chr5 126151899 126152067 -76933465 + LTR39 LTR ERV1 617 783 0 376 258 129 47 chr5 126152536 126152854 -76932678 + MER34B LTR ERV1 219 562 -3 1168 243 53 53 chr5 126153039 126153370 -76932162 - MER39 LTR ERV1 -9 698 368 2040 134 21 46 chr5 126153370 126153743 -76931789 + THE1B LTR MaLR 1 364 0 11203 95 19 7 chr5 126153743 126155305 -76930227 + THE1B-int LTR MaLR 1 1580 0 2011 132 27 48 chr5 126155305 126155677 -76929855 + THE1B LTR MaLR 1 364 0 1168 243 53 53 chr5 126155677 126155799 -76929733 - MER39 LTR ERV1 -336 371 243 319 269 67 10 chr5 126156047 126156151 -76929381 - MLT1I LTR MaLR -7 402 293 2003 145 3 3 chr5 126156347 126156643 -76928889 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr5 126157821 126157844 -76927688 + AT_rich Low_complexity Low_complexity 1 23 0 3226 134 87 16 chr5 126158138 126158743 -76926789 - MER51A LTR ERV1 0 640 1 1835 165 9 3 chr5 126158746 126159073 -76926459 - MER51A-int LTR ERV1 -1 7815 7487 2073 294 51 50 chr5 126159224 126159947 -76925585 - MER51A-int LTR ERV1 -1149 4084 5299 1935 45 0 8 chr5 126159947 126160193 -76925339 - L1PA4 LINE L1 0 6155 5912 2073 294 51 50 chr5 126160193 126162581 -76922951 - MER51A-int LTR ERV1 67 5300 2916 1224 229 27 61 chr5 126163099 126163427 -76922105 - MER51A-int LTR ERV1 -4378 502 225 999 173 64 64 chr5 126163432 126163715 -76921817 - MER51A-int LTR ERV1 -7529 287 5 2658 134 47 39 chr5 126163742 126164436 -76921096 - MER51A LTR ERV1 -9 625 1 1545 184 83 7 chr5 126164466 126164754 -76920778 + AluJo SINE Alu 1 310 -2 293 288 75 62 chr5 126165059 126165162 -76920370 + MIR SINE MIR 36 143 -119 680 208 0 41 chr5 126165162 126165359 -76920173 - MER53 DNA DNA 0 189 1 293 288 75 62 chr5 126165359 126165415 -76920117 + MIR SINE MIR 143 197 -65 381 318 42 28 chr5 126165418 126165632 -76919900 - MIR SINE MIR -36 226 10 862 227 22 0 chr5 126165633 126165818 -76919714 - MER5A DNA MER1_type 0 189 1 423 0 0 0 chr5 126166298 126166345 -76919187 + (CA)n Simple_repeat Simple_repeat 1 47 0 28 0 0 0 chr5 126166433 126166461 -76919071 + AT_rich Low_complexity Low_complexity 1 28 0 4352 185 35 13 chr5 126166568 126167412 -76918120 + MER21B LTR ERV1 1 863 0 4133 172 55 3 chr5 126167687 126168431 -76917101 - LTR39 LTR ERV1 0 783 1 260 301 0 24 chr5 126169937 126170020 -76915512 - LTR39-int LTR ERV1 -280 4656 4576 10783 188 89 73 chr5 126170032 126172103 -76913429 - MER83B-int LTR ERV1 -541 5790 3754 2357 65 0 13 chr5 126172103 126172409 -76913123 - AluY SINE Alu -9 302 1 10783 188 89 73 chr5 126172409 126173110 -76912422 - MER83B-int LTR ERV1 -2577 3754 3066 1972 143 24 0 chr5 126173110 126173446 -76912086 - L1PB4 LINE L1 -2 6154 5811 10783 188 89 73 chr5 126173446 126173616 -76911916 - MER83B-int LTR ERV1 -3265 3066 2900 596 26 13 0 chr5 126173616 126173694 -76911838 + (GA)n Simple_repeat Simple_repeat 2 80 0 10783 188 89 73 chr5 126173694 126173762 -76911770 - MER83B-int LTR ERV1 -3431 2900 2835 1742 125 24 45 chr5 126173762 126174050 -76911482 + AluJo SINE Alu 1 282 -30 10783 188 89 73 chr5 126174050 126174789 -76910743 - MER83B-int LTR ERV1 -3496 2835 1744 2973 186 38 40 chr5 126175307 126176015 -76909517 - L1ME1 LINE L1 -46 6120 5414 290 185 37 25 chr5 126176022 126176103 -76909429 + L1MC4a LINE L1 7160 7241 -567 647 236 91 30 chr5 126177497 126177696 -76907836 - MIR SINE MIR -49 213 3 1984 278 68 6 chr5 126178441 126179126 -76906406 - L1MEc LINE L1 -5605 791 57 1575 146 143 54 chr5 126179126 126179461 -76906071 + MLT1A1 LTR MaLR 1 365 0 1984 278 68 6 chr5 126179461 126179499 -76906033 - L1MEc LINE L1 -6339 57 23 239 396 34 40 chr5 126179505 126179833 -76905699 + L2 LINE L2 2892 3217 -55 1592 220 22 54 chr5 126180925 126181429 -76904103 - MLT1D LTR MaLR -17 488 1 224 311 0 0 chr5 126183060 126183121 -76902411 + GA-rich Low_complexity Low_complexity 3 63 0 198 179 75 60 chr5 126183456 126183523 -76902009 + MIR SINE MIR 102 169 -93 496 269 66 15 chr5 126186279 126186476 -76899056 - MIR3 SINE MIR -1 207 1 1913 128 55 68 chr5 126187370 126187737 -76897795 - THE1B LTR MaLR -2 362 1 865 147 35 30 chr5 126187859 126188039 -76897493 + L1MA7 LINE L1 5901 6087 -213 1156 158 38 8 chr5 126188069 126188309 -76897223 + L1MA7 LINE L1 6043 6289 -2 620 329 43 4 chr5 126188415 126188646 -76896886 - MIR SINE MIR -18 244 5 672 176 17 25 chr5 126188915 126189060 -76896472 - FLAM_A SINE Alu 0 146 3 329 268 62 0 chr5 126189624 126189721 -76895811 + MIR SINE MIR 160 262 0 285 303 138 0 chr5 126189751 126189860 -76895672 + MIR SINE MIR 47 170 -92 558 279 0 14 chr5 126190184 126190331 -76895201 - MLT1E LTR MaLR -448 145 1 583 226 226 45 chr5 126190641 126190862 -76894670 + MIR SINE MIR 2 262 0 268 321 136 0 chr5 126190981 126191121 -76894411 - L2 LINE L2 -819 2495 2337 452 233 7 80 chr5 126191182 126191332 -76894200 + L2 LINE L2 3175 3313 0 2491 79 0 0 chr5 126191938 126192241 -76893291 + AluY SINE Alu 1 303 -8 24 53 0 0 chr5 126194816 126194854 -76890678 + AT_rich Low_complexity Low_complexity 1 38 0 851 255 61 5 chr5 126195021 126195297 -76890235 - MER110A LTR ERV1 0 468 207 674 239 54 50 chr5 126195522 126195781 -76889751 - L1MC4a LINE L1 -1837 5971 5712 1676 114 4 0 chr5 126195808 126196054 -76889478 + Tigger1 DNA MER2_type 2 248 -2170 263 264 132 11 chr5 126198923 126199014 -76886518 - L2 LINE L2 -21 3292 3191 2149 149 62 11 chr5 126199099 126199536 -76885996 - L1MB4 LINE L1 0 6180 5722 2229 46 4 0 chr5 126199542 126199801 -76885731 - AluY SINE Alu -15 296 37 3993 166 53 8 chr5 126200566 126200771 -76884761 + LTR39 LTR ERV1 2 196 -587 2137 103 33 3 chr5 126200771 126201071 -76884461 - AluSc SINE Alu 0 309 1 3993 166 53 8 chr5 126201071 126201613 -76883919 + LTR39 LTR ERV1 196 783 0 304 351 54 7 chr5 126202084 126202232 -76883300 + MER57-int LTR ERV1 1434 1588 -5949 630 116 163 8 chr5 126202259 126202388 -76883144 + MER57-int LTR ERV1 939 1087 -5244 369 281 23 31 chr5 126202867 126202995 -76882537 + MIR3 SINE MIR 15 141 -67 2499 237 80 26 chr5 126203545 126204506 -76881026 - Charlie2 DNA MER1_type 0 2862 1850 187 229 42 0 chr5 126204582 126204602 -76880930 - L3 LINE CR1 -444 1133 1112 364 211 13 13 chr5 126204602 126204678 -76880854 + MER5A DNA MER1_type 1 76 -113 2447 69 0 0 chr5 126204678 126204984 -76880548 + AluY SINE Alu 1 306 -5 2965 144 4 0 chr5 126204989 126205500 -76880032 - L1M2 LINE L1 -568 5723 5212 3347 189 53 1 chr5 126206457 126207139 -76878393 + LTR62 LTR ERVK 1 717 -2 261 0 0 0 chr5 126207992 126208021 -76877511 + (A)n Simple_repeat Simple_repeat 1 29 0 468 221 122 8 chr5 126209151 126209282 -76876250 - MER69 DNA AcHobo -2380 146 1 3679 158 2 6 chr5 126209734 126210369 -76875163 - L1M2 LINE L1 -957 5189 4558 2993 146 35 5 chr5 126210369 126210929 -76874603 + L1MA7 LINE L1 5706 6290 -1 677 225 8 0 chr5 126210933 126211062 -76874470 + MER5A DNA MER1_type 60 189 0 263 292 133 25 chr5 126211283 126211403 -76874129 - MER5A DNA MER1_type -1 188 56 220 345 86 29 chr5 126211284 126211423 -76874109 + MER5A DNA MER1_type 17 163 -26 * 1309 207 154 51 chr5 126211847 126212398 -76873134 - L1M4 LINE L1 -1640 4506 3899 1904 84 98 18 chr5 126213317 126213591 -76871941 - AluSx SINE Alu -16 296 1 409 202 115 29 chr5 126214669 126214773 -76870759 - MIR SINE MIR -113 149 37 450 265 68 8 chr5 126216263 126216380 -76869152 - LTR16A LTR ERVL -257 193 70 645 197 24 8 chr5 126217036 126217163 -76868369 + FRAM SINE Alu 1 129 -47 2382 159 13 34 chr5 126217691 126218162 -76867370 - MER65C LTR ERV1 0 461 1 1471 226 42 100 chr5 126218371 126219021 -76866511 + LTR9 LTR ERV1 1 612 0 1374 171 51 100 chr5 126219914 126220405 -76865127 - L1MA9 LINE L1 -9 6303 5837 893 168 101 19 chr5 126220406 126220614 -76864918 - L1MA8 LINE L1 -177 6114 5890 194 194 0 0 chr5 126220839 126220875 -76864657 - L2 LINE L2 -3 3310 3275 2086 133 10 0 chr5 126221171 126221480 -76864052 + AluSq SINE Alu 1 312 -1 207 0 0 0 chr5 126221487 126221510 -76864022 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2246 153 53 17 chr5 126221604 126222017 -76863515 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr5 126222194 126222218 -76863314 + AT_rich Low_complexity Low_complexity 1 24 0 238 364 30 8 chr5 126222991 126223123 -76862409 + HAL1b LINE L1 245 379 -969 506 254 61 50 chr5 126223257 126223537 -76861995 + HAL1b LINE L1 505 787 -561 1222 171 0 0 chr5 126223733 126223938 -76861594 - L1M1 LINE L1 -545 5937 5733 231 298 79 0 chr5 126223979 126224093 -76861439 - MIR SINE MIR -3 259 137 7728 22 0 47 chr5 126224119 126225361 -76860171 - L1PA4 LINE L1 -5 6150 4932 2058 109 7 0 chr5 126225366 126225641 -76859891 - AluY SINE Alu -34 277 1 2378 167 21 19 chr5 126225642 126225685 -76859847 - L1M1 LINE L1 -735 5565 5524 3671 103 0 8 chr5 126225685 126226200 -76859332 + MER9 LTR ERVK 1 511 0 2378 167 21 19 chr5 126226200 126226823 -76858709 - L1M1 LINE L1 -776 5524 4897 9082 162 20 119 chr5 126226924 126227676 -76857856 - L1M1 LINE L1 -1095 5233 4408 2023 59 4 0 chr5 126227676 126227929 -76857603 + L1PA3 LINE L1 5897 6153 -2 9082 162 20 119 chr5 126227929 126229186 -76856346 - L1M1 LINE L1 -1920 4408 3397 197 32 0 32 chr5 126229195 126229226 -76856306 + (TTAA)n Simple_repeat Simple_repeat 2 31 0 711 200 0 7 chr5 126229226 126229351 -76856181 - AluJo SINE Alu -186 126 1 9082 162 20 119 chr5 126229351 126229843 -76855689 - L1M1 LINE L1 -2931 3397 2858 7533 166 13 17 chr5 126229839 126230724 -76854808 - L1M1 LINE L1 -4065 1263 706 * 2170 132 0 3 chr5 126230724 126231035 -76854497 - AluSx SINE Alu 0 312 3 7533 166 13 17 chr5 126231035 126231734 -76853798 - L1M1 LINE L1 -4622 706 6 768 307 72 27 chr5 126232216 126232860 -76852672 + L1ME3A LINE L1 5259 5939 -231 374 299 155 14 chr5 126234262 126234469 -76851063 + MIR SINE MIR 1 236 -26 474 65 0 0 chr5 126234840 126234902 -76850630 + (TCCA)n Simple_repeat Simple_repeat 4 65 0 265 304 29 14 chr5 126236827 126236965 -76848567 - LTR33 LTR ERVL -2 519 380 502 272 117 22 chr5 126237094 126237274 -76848258 - LTR33 LTR ERVL -324 197 1 316 306 9 18 chr5 126237765 126237876 -76847656 - MIR SINE MIR -79 129 20 3701 169 60 3 chr5 126238470 126239151 -76846381 - MER54A LTR ERVL 0 901 182 32 91 0 0 chr5 126239251 126239339 -76846193 + AT_rich Low_complexity Low_complexity 1 88 0 208 326 98 5 chr5 126239873 126240088 -76845444 + L2 LINE L2 1984 2218 -1096 22 56 0 0 chr5 126240111 126240147 -76845385 + AT_rich Low_complexity Low_complexity 1 36 0 2282 81 0 7 chr5 126240155 126240480 -76845052 - AluY SINE Alu 0 323 1 309 269 77 0 chr5 126240597 126240675 -76844857 - L2 LINE L2 0 3272 3189 268 267 0 0 chr5 126240756 126240816 -76844716 - MLT1J2 LTR MaLR -37 413 354 1372 302 94 50 chr5 126241047 126242186 -76843346 - L2 LINE L2 -257 3056 1869 320 343 66 40 chr5 126242565 126242868 -76842664 + L3b LINE CR1 1132 1442 -141 216 300 29 0 chr5 126244497 126244567 -76840965 + L2 LINE L2 3201 3272 0 202 307 92 18 chr5 126244696 126244859 -76840673 + L3 LINE CR1 781 955 -622 503 274 63 35 chr5 126244866 126245121 -76840411 - MIR SINE MIR 0 262 1 182 353 49 33 chr5 126245374 126245496 -76840036 - MIR SINE MIR -119 143 20 194 410 56 11 chr5 126245546 126245724 -76839808 - MIR3 SINE MIR -6 202 17 4731 151 11 14 chr5 126248677 126249566 -76835966 - L1MB3 LINE L1 -1 6418 5532 1287 226 40 28 chr5 126249539 126250070 -76835462 - L1MB3 LINE L1 -2555 3827 3291 * 2068 121 12 15 chr5 126250072 126250403 -76835129 + THE1C LTR MaLR 1 330 -45 10049 126 35 7 chr5 126250404 126251940 -76833592 + THE1C-int LTR MaLR 2 1580 0 2292 124 24 14 chr5 126251940 126252311 -76833221 + THE1C LTR MaLR 1 375 0 11062 191 48 53 chr5 126252314 126252797 -76832735 - L1MB3 LINE L1 -3092 3290 2806 1603 134 42 114 chr5 126252797 126253201 -76832331 + THE1C LTR MaLR 1 375 0 11062 191 48 53 chr5 126253201 126253473 -76832059 - L1MB3 LINE L1 -3576 2806 2534 759 22 0 0 chr5 126253473 126253562 -76831970 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 1735 173 33 0 chr5 126253562 126253833 -76831699 - AluSx SINE Alu -32 280 1 11062 191 48 53 chr5 126253833 126256204 -76829328 - L1MB3 LINE L1 -3847 2535 178 2146 126 3 0 chr5 126256204 126256497 -76829035 + AluSq SINE Alu 5 298 -15 11062 191 48 53 chr5 126256497 126256660 -76828872 - L1MB3 LINE L1 -6204 178 16 299 282 55 6 chr5 126256792 126256973 -76828559 + L1MEd LINE L1 895 1084 -5035 272 300 95 57 chr5 126257966 126258176 -76827356 - MLT1H LTR MaLR -207 342 125 347 232 125 54 chr5 126259252 126259420 -76826112 + MLT1K LTR MaLR 345 524 -64 283 185 152 11 chr5 126259485 126259577 -76825955 - Zaphod DNA AcHobo -77 3954 3850 * 389 145 26 0 chr5 126259573 126259649 -76825883 - Zaphod DNA AcHobo -1145 2886 2809 688 318 124 3 chr5 126260085 126260415 -76825117 - MER115 DNA AcHobo -300 393 24 999 145 0 0 chr5 126260442 126260614 -76824918 + (TCCCC)n Simple_repeat Simple_repeat 5 176 0 432 0 0 0 chr5 126260613 126260661 -76824871 + (TTCTC)n Simple_repeat Simple_repeat 3 50 0 * 1731 97 15 19 chr5 126260665 126260924 -76824608 - L1PA10 LINE L1 -16 6152 5895 2087 122 14 7 chr5 126261449 126261743 -76823789 + AluSx SINE Alu 1 296 -16 245 320 48 14 chr5 126262855 126263046 -76822486 - MER20B DNA MER1_type -17 202 6 236 225 7 72 chr5 126263182 126263320 -76822212 + (TTATA)n Simple_repeat Simple_repeat 4 132 0 1172 289 81 33 chr5 126264526 126264982 -76820550 + L2 LINE L2 2836 3313 0 336 248 75 45 chr5 126265602 126265822 -76819710 + L1ME LINE L1 5616 5842 -279 369 331 75 32 chr5 126265904 126266183 -76819349 - L1M4 LINE L1 -1630 4516 4227 210 227 0 0 chr5 126267629 126267673 -76817859 + L2 LINE L2 3270 3313 0 443 167 0 13 chr5 126268804 126268882 -76816650 + Tigger2 DNA MER2_type 1 77 -2641 680 227 5 74 chr5 126268898 126269101 -76816431 - MER8 DNA MER2_type -50 189 1 212 57 0 29 chr5 126269325 126269360 -76816172 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 710 196 0 36 chr5 126269388 126269526 -76816006 + FLAM_A SINE Alu 1 133 0 711 222 90 5 chr5 126269624 126269813 -76815719 - L2 LINE L2 -1613 1701 1497 301 325 75 10 chr5 126269999 126270199 -76815333 - MLT1J2 LTR MaLR -237 213 1 562 289 139 0 chr5 126270199 126270407 -76815125 - L2 LINE L2 -1813 1501 1265 719 277 18 22 chr5 126270479 126270703 -76814829 - MLT2E LTR ERVL -400 228 6 513 219 160 43 chr5 126270706 126270893 -76814639 + L2 LINE L2 3105 3313 0 245 297 16 0 chr5 126271865 126271929 -76813603 + MER5B DNA MER1_type 63 127 -51 183 42 0 0 chr5 126272840 126272864 -76812668 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 676 286 212 9 chr5 126272903 126273463 -76812069 - L2 LINE L2 -42 3271 2599 859 361 52 13 chr5 126273560 126274235 -76811297 - ERVL LTR ERVL -2118 3646 2946 411 239 11 0 chr5 126274355 126274447 -76811085 + MER58A DNA MER1_type 47 139 0 681 298 47 59 chr5 126274700 126275109 -76810423 + L1M4 LINE L1 3105 3508 -2638 2044 126 3 17 chr5 126275173 126275474 -76810058 - AluY SINE Alu -14 297 1 452 281 106 36 chr5 126275548 126275822 -76809710 - L1MEd LINE L1 -5559 1388 1096 343 263 105 0 chr5 126276721 126276854 -76808678 - L1MC4 LINE L1 0 8042 7896 226 272 78 63 chr5 126277140 126277346 -76808186 - L1ME LINE L1 -372 5749 5541 281 307 139 0 chr5 126277786 126278089 -76807443 - L1ME LINE L1 -924 5222 4878 356 306 87 31 chr5 126278144 126278340 -76807192 - L1ME LINE L1 -1367 4779 4573 243 337 30 0 chr5 126279026 126279127 -76806405 - MIR3 SINE MIR -7 201 98 427 310 164 36 chr5 126279367 126279861 -76805671 + L2 LINE L2 2148 2704 -610 394 203 138 43 chr5 126279862 126280000 -76805532 - L1MEd LINE L1 -5493 1366 1216 336 103 0 0 chr5 126280041 126280099 -76805433 + (TTTAA)n Simple_repeat Simple_repeat 3 60 0 1685 288 104 36 chr5 126280605 126281432 -76804100 - L1MEd LINE L1 -5927 932 50 1328 52 17 0 chr5 126282046 126282219 -76803313 + L1PA4 LINE L1 5980 6155 0 1224 241 110 24 chr5 126282956 126283203 -76802329 + MLT1J LTR MaLR 8 232 -279 2395 91 3 0 chr5 126283203 126283511 -76802021 - AluY SINE Alu -2 309 1 1224 241 110 24 chr5 126283511 126283682 -76801850 + MLT1J LTR MaLR 232 462 -49 290 185 11 43 chr5 126283872 126283964 -76801568 - L1MA10 LINE L1 -18 6316 6228 232 208 0 0 chr5 126284153 126284201 -76801331 - L1MB8 LINE L1 -185 5993 5946 767 228 46 5 chr5 126284213 126284432 -76801100 - L1MB8 LINE L1 -351 5815 5588 3001 257 38 21 chr5 126284438 126285838 -76799694 + L1M3c LINE L1 1 1478 -4733 1348 226 111 17 chr5 126285838 126286200 -76799332 + MSTD LTR MaLR 1 396 0 3001 257 38 21 chr5 126286200 126286779 -76798753 + L1M3c LINE L1 1478 2046 -4165 377 217 33 82 chr5 126286781 126286859 -76798673 - L1M4 LINE L1 -2147 3999 3919 2310 71 0 61 chr5 126286859 126287185 -76798347 - AluY SINE Alu -5 306 1 377 217 33 82 chr5 126287185 126287290 -76798242 - L1M4 LINE L1 -2227 3919 3825 3435 79 10 6 chr5 126287425 126288325 -76797207 - L1PB4 LINE L1 -331 5825 4894 12518 98 2 1 chr5 126288337 126290162 -76795370 - L1P3 LINE L1 -4644 1807 1 1117 233 50 82 chr5 126290184 126290207 -76795325 - MER77 LTR ERV1 -218 387 365 950 247 84 71 chr5 126290207 126290741 -76794791 + MER34 LTR ERV1 1 541 -1 1117 233 50 82 chr5 126290741 126291117 -76794415 - MER77 LTR ERV1 -240 365 1 2200 135 0 0 chr5 126291334 126291645 -76793887 + AluSq SINE Alu 1 311 -2 408 149 14 14 chr5 126291719 126291793 -76793739 + AluSq/x SINE Alu 63 136 -177 883 463 0 27 chr5 126291793 126292087 -76793445 + AluSx SINE Alu 2 287 -15 204 67 0 0 chr5 126292087 126292117 -76793415 + (CCAA)n Simple_repeat Simple_repeat 1 30 0 2484 58 37 0 chr5 126292135 126292460 -76793072 + L1PA7 LINE L1 5814 6150 -4 891 217 57 4 chr5 126292559 126292789 -76792743 + MER77 LTR ERV1 362 603 -2 489 191 100 0 chr5 126293108 126293218 -76792314 - MER103 DNA DNA -43 123 3 246 211 0 0 chr5 126294037 126294089 -76791443 - MER68 LTR ERV1 -467 95 44 264 313 69 38 chr5 126294621 126294752 -76790780 + L2 LINE L2 3133 3267 -5 28 48 0 0 chr5 126294772 126294814 -76790718 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr5 126294919 126294961 -76790571 + AT_rich Low_complexity Low_complexity 1 42 0 22109 29 4 0 chr5 126295003 126298444 -76787088 - L1PA4 LINE L1 0 6155 2705 27 62 0 0 chr5 126298945 126298993 -76786539 + AT_rich Low_complexity Low_complexity 1 48 0 650 162 97 0 chr5 126298995 126299149 -76786383 - MER45B DNA AcHobo -173 867 699 2501 70 0 0 chr5 126299314 126299614 -76785918 - AluY SINE Alu -11 300 1 210 310 11 11 chr5 126299880 126299967 -76785565 + MIR SINE MIR 141 227 -35 272 128 0 0 chr5 126300292 126300333 -76785199 - MLT2B3 LTR ERVL 0 554 514 243 88 0 0 chr5 126300333 126300367 -76785165 + (TG)n Simple_repeat Simple_repeat 1 34 0 259 163 0 76 chr5 126300393 126300485 -76785047 + (TA)n Simple_repeat Simple_repeat 2 86 0 2191 177 20 91 chr5 126300525 126301094 -76784438 - MLT2B3 LTR ERVL -38 508 1 191 322 116 25 chr5 126301631 126301752 -76783780 - L2 LINE L2 -4 3268 3137 2087 136 10 49 chr5 126301911 126302081 -76783451 + MLT1B LTR MaLR 17 192 -198 2230 114 10 0 chr5 126302081 126302387 -76783145 + AluSc SINE Alu 1 309 0 2087 136 10 49 chr5 126302387 126302605 -76782927 + MLT1B LTR MaLR 192 390 0 344 252 26 0 chr5 126302617 126302732 -76782800 - L1MEd LINE L1 -5992 127 10 276 315 90 0 chr5 126302828 126302939 -76782593 + MIR SINE MIR 31 151 -57 1921 87 54 36 chr5 126302941 126303218 -76782314 + AluSx SINE Alu 1 282 -30 198 0 0 0 chr5 126304186 126304208 -76781324 + (A)n Simple_repeat Simple_repeat 1 22 0 2134 98 28 3 chr5 126304448 126304734 -76780798 + AluY SINE Alu 1 293 -18 484 270 159 13 chr5 126305212 126305438 -76780094 + MLT1K LTR MaLR 258 516 -72 378 0 0 0 chr5 126305461 126305503 -76780029 + (CA)n Simple_repeat Simple_repeat 2 43 0 480 255 19 33 chr5 126305568 126305706 -76779826 - MIR3 SINE MIR -54 154 15 2666 94 58 19 chr5 126305993 126306380 -76779152 + MLT2A1 LTR ERVL 1 408 -36 519 17 0 0 chr5 126306380 126306440 -76779092 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 2666 94 58 19 chr5 126306440 126306479 -76779053 + MLT2A1 LTR ERVL 408 444 0 195 42 0 0 chr5 126306664 126306688 -76778844 + (CA)n Simple_repeat Simple_repeat 2 25 0 390 238 143 30 chr5 126306813 126306981 -76778551 - MER115 DNA AcHobo -67 626 440 270 338 99 7 chr5 126308119 126308261 -76777271 - MIR3 SINE MIR -45 163 9 23 33 0 0 chr5 126308503 126308533 -76776999 + AT_rich Low_complexity Low_complexity 1 30 0 332 311 66 52 chr5 126309547 126309759 -76775773 - MIR SINE MIR -25 237 23 25 0 0 0 chr5 126310050 126310075 -76775457 + AT_rich Low_complexity Low_complexity 1 25 0 506 235 103 23 chr5 126310200 126310429 -76775103 - MIR SINE MIR -1 261 18 2040 136 0 10 chr5 126310547 126310855 -76774677 - AluSx SINE Alu -7 305 1 1545 196 129 26 chr5 126311084 126311297 -76774235 - MSTA LTR MaLR 0 428 238 2003 88 66 4 chr5 126311297 126311571 -76773961 - AluSg1 SINE Alu -18 291 1 1545 196 129 26 chr5 126311571 126311745 -76773787 - MSTA LTR MaLR -190 238 1 261 0 0 0 chr5 126311898 126311927 -76773605 + (A)n Simple_repeat Simple_repeat 1 29 0 2487 182 28 19 chr5 126312588 126313056 -76772476 - MER70A LTR ERVL 0 472 1 866 211 96 36 chr5 126313643 126313923 -76771609 + MER21B LTR ERV1 507 803 -60 2756 265 48 6 chr5 126314127 126315532 -76770000 - L1MEc LINE L1 -2383 3832 2326 2328 91 0 0 chr5 126315532 126315828 -76769704 - AluY SINE Alu -15 296 1 2170 267 43 11 chr5 126315843 126316540 -76768992 - L1MEc LINE L1 -5411 985 267 576 299 40 29 chr5 126316555 126316833 -76768699 - LTR16B LTR ERVL -12 452 172 453 303 42 0 chr5 126317105 126317224 -76768308 - L2 LINE L2 -3 3269 3146 296 289 99 39 chr5 126318820 126319038 -76766494 - L2 LINE L2 -271 3001 2773 732 308 16 0 chr5 126319098 126319283 -76766249 - MIR SINE MIR -41 221 34 330 304 73 63 chr5 126319297 126319493 -76766039 - L2 LINE L2 -565 2749 2548 2306 72 0 7 chr5 126319493 126319783 -76765749 - AluY SINE Alu -13 298 11 330 304 73 63 chr5 126319783 126319872 -76765660 - L2 LINE L2 -766 2548 2461 563 235 140 10 chr5 126320758 126320958 -76764574 + L1ME LINE L1 5555 5780 -390 1099 242 91 10 chr5 126320974 126321703 -76763829 + L1ME LINE L1 4832 5609 -555 371 377 11 0 chr5 126321703 126321878 -76763654 - L1M4 LINE L1 -1979 4167 3991 5510 127 3 16 chr5 126321912 126322833 -76762699 - L1PA13 LINE L1 -1 6162 5254 874 164 11 0 chr5 126322850 126323033 -76762499 + L1PA13 LINE L1 5047 5231 -915 5217 165 32 17 chr5 126323086 126324700 -76760832 - L1MA4 LINE L1 -9 6291 4664 460 267 43 65 chr5 126324732 126324964 -76760568 - L1M4 LINE L1 -2214 3932 3706 280 253 153 4 chr5 126325295 126325536 -76759996 + L1M4 LINE L1 4550 4826 -1320 350 326 64 32 chr5 126325826 126326044 -76759488 - LTR16C LTR ERVL -188 303 79 349 333 99 12 chr5 126326663 126326834 -76758698 + MIR SINE MIR 11 196 -66 743 241 75 0 chr5 126327815 126328014 -76757518 - LTR16A LTR ERVL 0 450 237 1069 140 42 23 chr5 126328257 126328471 -76757061 + MER96B DNA MER1_type? 10 227 -190 27 49 0 0 chr5 126329324 126329365 -76756167 + AT_rich Low_complexity Low_complexity 1 41 0 418 230 70 38 chr5 126329494 126329707 -76755825 - L1MC4a LINE L1 -1921 5956 5737 392 311 65 41 chr5 126329799 126330409 -76755123 - L1MC4a LINE L1 -1198 5017 4344 27 49 0 0 chr5 126330795 126330836 -76754696 + AT_rich Low_complexity Low_complexity 1 41 0 526 294 58 40 chr5 126330966 126331242 -76754290 - L1M4 LINE L1 -1536 4610 4330 377 271 29 0 chr5 126331247 126331417 -76754115 - L1MC4a LINE L1 -5066 1152 978 365 323 8 8 chr5 126331419 126331543 -76753989 - L1MC4a LINE L1 -5483 913 790 269 329 6 37 chr5 126332830 126332994 -76752538 - HAL1b LINE L1 -758 590 432 330 190 4 59 chr5 126333168 126333400 -76752132 + AluJo SINE Alu 1 282 -20 1374 262 111 66 chr5 126333404 126333617 -76751915 - HAL1b LINE L1 -5 1343 1141 2062 96 14 7 chr5 126333617 126333924 -76751608 - AluSc SINE Alu 0 309 1 2157 125 3 0 chr5 126333926 126334221 -76751311 - AluSq SINE Alu -17 296 1 1374 262 111 66 chr5 126334221 126334569 -76750963 - HAL1b LINE L1 -207 1141 810 1802 168 3 3 chr5 126334569 126334861 -76750671 - AluJo SINE Alu -20 292 1 1374 262 111 66 chr5 126334861 126335513 -76750019 - HAL1b LINE L1 -538 810 70 1069 268 166 30 chr5 126335854 126336313 -76749219 - LTR33 LTR ERVL 0 521 1 2100 124 7 0 chr5 126337678 126337969 -76747563 - AluSg SINE Alu -17 293 1 777 249 51 0 chr5 126337998 126338235 -76747297 - L1MA9 LINE L1 -38 6274 6026 662 270 65 93 chr5 126339048 126339404 -76746128 + L2 LINE L2 2967 3312 -1 384 59 0 0 chr5 126339409 126339460 -76746072 + (GGAA)n Simple_repeat Simple_repeat 1 51 0 469 313 108 37 chr5 126339793 126340463 -76745069 + L2 LINE L2 1922 2638 -676 2473 266 124 34 chr5 126340908 126341900 -76743632 - L2 LINE L2 -714 2600 1520 231 212 30 30 chr5 126342037 126342103 -76743429 - L1MC4a LINE L1 -5846 359 294 207 390 37 0 chr5 126343164 126343300 -76742232 - L2 LINE L2 -568 2746 2606 32 35 0 18 chr5 126344007 126344046 -76741486 + AT_rich Low_complexity Low_complexity 1 40 -16 7563 30 0 0 chr5 126344046 126345671 -76739861 - L1PA3 LINE L1 -3 6152 4528 32 35 0 18 chr5 126345671 126345688 -76739844 + AT_rich Low_complexity Low_complexity 40 56 0 225 288 0 17 chr5 126345780 126345839 -76739693 - MIR SINE MIR -6 256 199 238 182 0 55 chr5 126345978 126346033 -76739499 + L2 LINE L2 3262 3313 0 524 334 101 33 chr5 126346266 126346661 -76738871 + L2 LINE L2 2811 3232 -81 1068 199 5 0 chr5 126346851 126347057 -76738475 - MER3 DNA MER1_type -1 208 2 300 290 84 56 chr5 126347105 126347319 -76738213 + L1 LINE L1 5102 5321 -825 253 358 51 0 chr5 126347594 126347770 -76737762 - L1MC4a LINE L1 -1884 5924 5740 420 261 47 99 chr5 126347771 126347982 -76737550 + MLT1L LTR MaLR 114 313 -302 808 151 12 35 chr5 126348008 126348180 -76737352 - L1MA4A LINE L1 -10 6293 6126 4327 150 23 39 chr5 126348180 126349417 -76736115 - L1MA4A LINE L1 -591 5712 4469 540 335 31 9 chr5 126349447 126349674 -76735858 + MLT1L LTR MaLR 384 615 0 3203 192 108 39 chr5 126349692 126349896 -76735636 - L1MD2 LINE L1 -4 6355 6166 225 65 0 0 chr5 126349896 126349927 -76735605 + (TG)n Simple_repeat Simple_repeat 2 32 0 3203 192 108 39 chr5 126349927 126350337 -76735195 - L1MD2 LINE L1 -193 6166 5786 216 67 0 0 chr5 126350337 126350367 -76735165 + (TG)n Simple_repeat Simple_repeat 2 31 0 3203 192 108 39 chr5 126350367 126350509 -76735023 - L1MD2 LINE L1 -573 5786 5655 2095 135 0 0 chr5 126350509 126350791 -76734741 + AluSx SINE Alu 10 291 -21 3203 192 108 39 chr5 126350791 126350905 -76734627 - L1MD2 LINE L1 -704 5655 5423 1981 261 43 16 chr5 126351829 126352388 -76733144 - MER90 LTR ERV1 0 575 2 441 282 144 67 chr5 126352817 126352914 -76732618 + MER102b DNA MER1_type 1 89 -1339 2390 82 0 0 chr5 126352914 126353218 -76732314 + AluY SINE Alu 3 306 -5 441 282 144 67 chr5 126353218 126353432 -76732100 + MER102b DNA MER1_type 89 336 -5 200 132 26 0 chr5 126353632 126353670 -76731862 + A-rich Low_complexity Low_complexity 3 41 0 233 158 0 0 chr5 126354991 126355029 -76730503 - MER116 DNA Mariner -40 40 3 450 302 100 55 chr5 126355029 126355539 -76729993 + L2 LINE L2 2271 2803 -511 780 214 0 19 chr5 126355711 126355865 -76729667 + FRAM SINE Alu 1 146 -30 478 255 89 89 chr5 126355940 126356211 -76729321 + MLT1J LTR MaLR 236 506 -5 641 235 104 6 chr5 126356565 126356748 -76728784 - L1ME1 LINE L1 -11 6155 5955 5005 166 35 15 chr5 126356841 126358001 -76727531 - L1MA7 LINE L1 -19 6272 5073 2071 146 0 0 chr5 126358001 126358295 -76727237 + AluSx SINE Alu 4 297 -15 5005 166 35 15 chr5 126358295 126358734 -76726798 - L1MA7 LINE L1 -1218 5073 4644 870 164 45 11 chr5 126358847 126359024 -76726508 - L1 LINE L1 -1350 4796 4614 2462 195 71 54 chr5 126359039 126359742 -76725790 - L1ME1 LINE L1 -194 5972 5258 560 253 7 20 chr5 126359756 126359902 -76725630 - L1ME LINE L1 -590 5576 5433 1369 159 25 35 chr5 126359906 126360189 -76725343 - L1MC3 LINE L1 -21 7764 7485 583 199 66 9 chr5 126360184 126360370 -76725162 - L1M3 LINE L1 -880 5454 5266 * 225 250 0 0 chr5 126360404 126360472 -76725060 + L1MC4 LINE L1 6636 6703 -1339 778 222 11 68 chr5 126360483 126360585 -76724947 - L1M3 LINE L1 -880 5266 5160 6967 50 8 0 chr5 126360585 126361847 -76723685 - L1PA8 LINE L1 -6 6166 4909 778 222 11 68 chr5 126361847 126362023 -76723509 - L1M3 LINE L1 -986 5160 5004 490 339 28 6 chr5 126362931 126363111 -76722421 + MIR3 SINE MIR 19 202 -6 443 171 243 20 chr5 126363202 126363354 -76722178 - MER53 DNA DNA -2 187 2 25 31 0 0 chr5 126364708 126364740 -76720792 + AT_rich Low_complexity Low_complexity 1 32 0 290 306 27 41 chr5 126365018 126365165 -76720367 + L2 LINE L2 2552 2696 -618 591 235 48 114 chr5 126365247 126365668 -76719864 - LTR37B LTR ERV1 -45 423 31 366 292 149 64 chr5 126365685 126366120 -76719412 + L2 LINE L2 2842 3313 0 258 265 78 90 chr5 126366412 126366578 -76718954 - MER5A DNA MER1_type -25 164 1 314 326 70 8 chr5 126367628 126367757 -76717775 + MIR3 SINE MIR 31 167 -41 251 246 0 131 chr5 126367759 126367881 -76717651 - MIR SINE MIR -39 223 118 1531 294 35 42 chr5 126367882 126368568 -76716964 + L1ME LINE L1 6 686 -5384 275 385 43 0 chr5 126368570 126368687 -76716845 - MIR SINE MIR -121 141 20 257 204 19 19 chr5 126368946 126369028 -76716504 + MLT1J1 LTR MaLR 60 180 -327 256 296 62 28 chr5 126369143 126369322 -76716210 + MLT1L LTR MaLR 429 613 -2 274 136 51 34 chr5 126369545 126369604 -76715928 + L1MC/D LINE L1 5414 5473 -871 602 193 20 7 chr5 126369710 126369860 -76715672 + Charlie1 DNA MER1_type 2599 2750 -11 548 258 32 13 chr5 126369909 126370064 -76715468 - MER5B DNA MER1_type -19 159 2 3082 173 51 51 chr5 126370064 126370791 -76714741 + LTR8A LTR ERV1 1 727 0 15846 92 10 2 chr5 126370987 126373758 -76711774 - L1PA7 LINE L1 -313 5841 3043 199 188 21 21 chr5 126374185 126374233 -76711299 - MIR SINE MIR -75 133 86 1619 253 30 63 chr5 126375473 126376598 -76708934 - L1ME LINE L1 -391 5771 4685 1466 187 13 50 chr5 126376759 126377058 -76708474 - AluJb SINE Alu -22 290 3 332 279 65 62 chr5 126377069 126377345 -76708187 - L1ME LINE L1 -1498 4648 4372 2066 229 64 26 chr5 126377745 126378399 -76707133 - L1ME2 LINE L1 0 6164 5486 1642 251 75 18 chr5 126378426 126378868 -76706664 - MLT1E LTR MaLR -126 467 1 1267 214 71 29 chr5 126379244 126379594 -76705938 + MLT1A1 LTR MaLR 1 365 0 196 304 123 36 chr5 126380198 126380319 -76705213 - L2 LINE L2 -1 3312 3176 6968 63 6 0 chr5 126380319 126381847 -76703685 + L1PA6 LINE L1 4617 6147 -7 196 304 123 36 chr5 126381847 126381863 -76703669 - L2 LINE L2 -137 3176 3163 344 307 100 7 chr5 126382580 126382720 -76702812 - L3b LINE CR1 -225 1358 1206 1000 259 55 89 chr5 126382787 126383336 -76702196 - MER34 LTR ERV1 -2 540 11 6015 189 93 24 chr5 126383689 126384040 -76701492 + L1MC3 LINE L1 5585 5910 -1875 2297 104 0 10 chr5 126384040 126384347 -76701185 - AluSq SINE Alu -9 304 1 6015 189 93 24 chr5 126384347 126384666 -76700866 + L1MC3 LINE L1 5910 6205 -1580 288 0 0 0 chr5 126384666 126384698 -76700834 + (GA)n Simple_repeat Simple_repeat 2 33 0 6015 189 93 24 chr5 126384698 126385909 -76699623 + L1MC3 LINE L1 6205 7785 0 2074 126 14 0 chr5 126386292 126386586 -76698946 + AluSg SINE Alu 1 298 -12 22 56 0 0 chr5 126386590 126386626 -76698906 + AT_rich Low_complexity Low_complexity 1 36 0 222 242 30 15 chr5 126387066 126387132 -76698400 + (CA)n Simple_repeat Simple_repeat 1 67 0 488 283 49 27 chr5 126387610 126387794 -76697738 + MIR3 SINE MIR 18 205 -3 2416 77 0 6 chr5 126388909 126389220 -76696312 - AluY SINE Alu -2 309 1 413 203 51 34 chr5 126389417 126389535 -76695997 - MER97c DNA MER1_type? -967 123 4 401 315 84 14 chr5 126389959 126390172 -76695360 - MIR SINE MIR -2 260 33 350 250 156 56 chr5 126390224 126390404 -76695128 - MIR SINE MIR -1 261 64 432 305 152 15 chr5 126391510 126391707 -76693825 + MIR SINE MIR 39 262 0 182 305 76 19 chr5 126391714 126391819 -76693713 - L3b LINE CR1 -74 1509 1399 1854 109 27 31 chr5 126392351 126392645 -76692887 - THE1B LTR MaLR 0 364 72 1494 219 103 18 chr5 126393444 126394046 -76691486 - Charlie2 DNA MER1_type -9 2853 2201 560 273 121 18 chr5 126394035 126394317 -76691215 - Charlie2 DNA MER1_type -2551 311 1 * 284 275 13 51 chr5 126394332 126394444 -76691088 - MIR SINE MIR -58 150 40 387 293 78 56 chr5 126394971 126395203 -76690329 - L3 LINE CR1 -548 1029 793 448 194 0 121 chr5 126395696 126395820 -76689712 + Charlie1a DNA MER1_type 38 146 -1309 3860 211 43 12 chr5 126395851 126395986 -76689546 + Charlie1a DNA MER1_type 233 362 -2399 2032 114 67 22 chr5 126395986 126396345 -76689187 + THE1C LTR MaLR 1 375 0 3860 211 43 12 chr5 126396345 126397268 -76688264 + Charlie1a DNA MER1_type 362 1324 -131 487 327 101 10 chr5 126399134 126399342 -76686190 + MIR SINE MIR 22 248 -14 408 81 48 0 chr5 126399531 126399593 -76685939 - MLT1E2 LTR MaLR -5 621 557 30422 106 11 55 chr5 126400608 126407069 -76678463 + L1PA7 LINE L1 1 6170 0 426 253 58 0 chr5 126407144 126407323 -76678209 + L1ME LINE L1 4026 4215 -1931 1465 153 0 0 chr5 126407755 126407970 -76677562 + AluJb SINE Alu 93 307 -5 26 0 0 0 chr5 126408124 126408150 -76677382 + AT_rich Low_complexity Low_complexity 1 26 0 316 364 29 46 chr5 126408229 126408402 -76677130 - L1ME3A LINE L1 -38 6132 5963 334 301 82 58 chr5 126408542 126408645 -76676887 + L1MC4 LINE L1 7694 7793 -249 189 0 0 0 chr5 126408645 126408666 -76676866 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2072 128 0 7 chr5 126408668 126408958 -76676574 - AluSx SINE Alu -24 288 1 334 301 82 58 chr5 126408958 126409057 -76676475 + L1MC4 LINE L1 7793 7904 -138 3676 335 46 19 chr5 126409101 126410683 -76674849 + ERVL LTR ERVL 3281 4929 -835 1693 166 61 25 chr5 126410683 126411045 -76674487 - THE1C LTR MaLR 0 375 1 3676 335 46 19 chr5 126411045 126411470 -76674062 + ERVL LTR ERVL 4929 5341 -423 237 327 47 9 chr5 126411726 126411833 -76673699 + LTR33 LTR ERVL 7 117 -404 393 317 68 5 chr5 126411977 126412182 -76673350 + LTR33 LTR ERVL 304 521 0 791 292 45 13 chr5 126412182 126412494 -76673038 - L2 LINE L2 -1621 1693 1372 578 232 79 38 chr5 126412499 126412561 -76672971 + L1ME LINE L1 5106 5164 -1006 1115 197 68 84 chr5 126412561 126412931 -76672601 + MLT1A1 LTR MaLR 1 364 -1 578 232 79 38 chr5 126412931 126413271 -76672261 + L1ME LINE L1 5164 5514 -656 471 280 98 5 chr5 126413272 126413465 -76672067 - L2 LINE L2 -2186 1128 918 10513 196 25 33 chr5 126414210 126418134 -76667398 - L1PB4 LINE L1 0 6859 2979 947 235 45 40 chr5 126418115 126418468 -76667064 - L1PB4 LINE L1 -5159 1691 1337 * 6451 210 14 79 chr5 126418485 126420112 -76665420 - L1PB4 LINE L1 -5322 1527 6 3134 239 25 17 chr5 126420141 126421099 -76664433 + L1ME1 LINE L1 5197 6161 -5 3599 166 36 9 chr5 126421617 126422302 -76663230 + MER44D DNA MER2_type 1 704 -1 5871 106 14 14 chr5 126422500 126423753 -76661779 + L1PA12 LINE L1 4911 6167 -1 407 282 24 24 chr5 126424616 126424740 -76660792 - L2 LINE L2 -22 3291 3168 1072 199 44 8 chr5 126424749 126425000 -76660532 - L1MA8 LINE L1 -110 6181 5922 * 2224 223 26 23 chr5 126424994 126425603 -76659929 + L1ME2 LINE L1 5258 5868 -296 2365 80 0 45 chr5 126425609 126425923 -76659609 + AluSp SINE Alu 1 300 -13 297 109 0 0 chr5 126425923 126425969 -76659563 + (TA)n Simple_repeat Simple_repeat 1 46 0 313 241 96 0 chr5 126425969 126426052 -76659480 + L1MC4 LINE L1 6613 6703 -1339 306 291 47 0 chr5 126426074 126426160 -76659372 - L1MC4 LINE L1 -1339 6703 6614 * 330 271 47 0 chr5 126426087 126426172 -76659360 + L1MC4 LINE L1 6615 6703 -1339 240 279 47 0 chr5 126426186 126426272 -76659260 - L1MC4 LINE L1 -1339 6703 6614 233 260 0 0 chr5 126426272 126426322 -76659210 + (TA)n Simple_repeat Simple_repeat 2 51 0 801 226 77 90 chr5 126426333 126426590 -76658942 + L1ME2 LINE L1 5879 6138 -46 1576 167 35 57 chr5 126426590 126426907 -76658625 + AluJo SINE Alu 1 310 -2 2388 63 7 3 chr5 126426908 126427210 -76658322 + AluY SINE Alu 1 303 -8 801 226 77 90 chr5 126427210 126427260 -76658272 + L1ME2 LINE L1 6137 6184 0 259 293 78 17 chr5 126427703 126427819 -76657713 - MLT1I LTR MaLR -50 359 237 261 387 40 47 chr5 126428623 126428773 -76656759 - L2 LINE L2 -204 3068 2920 491 292 99 0 chr5 126429138 126429309 -76656223 + MIR SINE MIR 37 224 -38 430 316 0 36 chr5 126429820 126429959 -76655573 - L2 LINE L2 0 3313 3180 260 349 38 19 chr5 126430166 126430272 -76655260 - MIR3 SINE MIR -40 168 61 534 281 55 27 chr5 126430450 126430706 -76654826 - MLT1J LTR MaLR -25 486 224 1040 227 40 53 chr5 126430885 126431207 -76654325 + MLT2C1 LTR ERVL 6 323 -74 1779 120 7 4 chr5 126431254 126431529 -76654003 - MER2 DNA MER2_type -69 276 1 1324 264 42 33 chr5 126431610 126432034 -76653498 - MLT2F LTR ERVL -235 428 1 305 258 45 11 chr5 126432042 126432131 -76653401 - MLT1J LTR MaLR -298 213 122 183 163 70 0 chr5 126432226 126432269 -76653263 - L2 LINE L2 -92 3221 3176 382 293 17 0 chr5 126432705 126432821 -76652711 - MIR SINE MIR 0 262 145 338 216 165 0 chr5 126433366 126433463 -76652069 - MIR SINE MIR -103 159 47 960 264 25 0 chr5 126436476 126436711 -76648821 - MIR SINE MIR -2 260 20 539 303 139 16 chr5 126436753 126436997 -76648535 - L2 LINE L2 -35 3278 3005 806 288 23 28 chr5 126437000 126437389 -76648143 + L1ME LINE L1 5355 5741 -429 210 71 0 0 chr5 126437479 126437507 -76648025 + (TG)n Simple_repeat Simple_repeat 2 29 0 236 303 303 11 chr5 126437856 126438127 -76647405 - L2 LINE L2 -376 2938 2589 531 301 54 0 chr5 126438142 126438308 -76647224 + MER91A DNA MER1_type 19 193 -3 * 739 312 68 29 chr5 126438308 126438677 -76646855 - L2 LINE L2 -721 2593 2210 226 273 202 0 chr5 126438708 126438807 -76646725 + L2 LINE L2 3193 3311 -2 244 315 41 0 chr5 126439611 126439684 -76645848 + L2 LINE L2 3180 3255 -17 599 294 78 16 chr5 126439823 126440068 -76645464 + MIR SINE MIR 3 262 0 432 233 144 68 chr5 126440328 126440474 -76645058 - L2 LINE L2 0 3272 3116 250 256 58 12 chr5 126440617 126440703 -76644829 - MIR SINE MIR -56 206 117 23 0 0 0 chr5 126441338 126441361 -76644171 + AT_rich Low_complexity Low_complexity 1 23 0 626 205 20 46 chr5 126442670 126442821 -76642711 - MER5A DNA MER1_type -42 147 1 560 214 18 0 chr5 126442930 126443042 -76642490 - MER81 DNA DNA 0 114 1 666 231 41 12 chr5 126443246 126443415 -76642117 - MER5B DNA MER1_type 0 178 5 600 314 108 19 chr5 126443480 126443840 -76641692 + MLT1H1 LTR MaLR 38 429 -126 234 0 0 0 chr5 126445267 126445293 -76640239 + (T)n Simple_repeat Simple_repeat 1 26 0 2409 74 0 22 chr5 126445977 126446289 -76639243 - AluSc SINE Alu -4 305 1 448 265 96 0 chr5 126446681 126446817 -76638715 + MER5A DNA MER1_type 7 155 -34 24 32 0 0 chr5 126446912 126446943 -76638589 + AT_rich Low_complexity Low_complexity 1 31 0 2103 129 6 3 chr5 126448171 126448525 -76637007 - AluSx SINE Alu 0 355 1 195 291 34 86 chr5 126449530 126449647 -76635885 + L2 LINE L2 2547 2657 -657 250 322 26 0 chr5 126450191 126450306 -76635226 + MIR SINE MIR 73 190 -72 312 243 36 27 chr5 126450508 126450619 -76634913 - LTR67 LTR ERVL -17 540 429 1271 196 32 46 chr5 126451229 126451422 -76634110 + MSTD LTR MaLR 1 190 -206 2250 105 3 0 chr5 126451422 126451717 -76633815 + AluSp SINE Alu 1 296 -17 1271 196 32 46 chr5 126451717 126451808 -76633724 + MSTD LTR MaLR 190 281 -115 784 100 0 0 chr5 126451954 126452064 -76633468 + MSTD LTR MaLR 287 396 0 764 266 35 10 chr5 126452080 126452283 -76633249 + MIR SINE MIR 9 216 -46 329 228 51 25 chr5 126453124 126453203 -76632329 + L2 LINE L2 3233 3313 0 360 43 0 0 chr5 126453698 126453744 -76631788 + (TG)n Simple_repeat Simple_repeat 1 46 0 550 249 217 59 chr5 126455002 126455459 -76630073 + MLT1H LTR MaLR 13 541 -8 366 285 86 7 chr5 126455863 126456014 -76629518 - MIR3 SINE MIR -23 185 23 2296 102 0 3 chr5 126456097 126456410 -76629122 - AluSx SINE Alu 0 312 1 183 345 64 9 chr5 126457830 126457940 -76627592 - L2 LINE L2 -20 3252 3137 363 319 75 38 chr5 126458843 126459056 -76626476 + MIR SINE MIR 2 222 -40 243 143 0 0 chr5 126459096 126459131 -76626401 + L2 LINE L2 3223 3257 -15 234 0 0 0 chr5 126459239 126459265 -76626267 + (TG)n Simple_repeat Simple_repeat 1 26 0 267 54 0 0 chr5 126459265 126459302 -76626230 + (GA)n Simple_repeat Simple_repeat 2 38 0 258 382 0 0 chr5 126459611 126459687 -76625845 - MIR SINE MIR -69 139 64 774 275 66 0 chr5 126459703 126460005 -76625527 - L1MEc LINE L1 -2475 3740 3419 * 4935 212 62 11 chr5 126460003 126461445 -76624087 + L1MB3 LINE L1 3890 5401 -769 3466 180 62 27 chr5 126461449 126461507 -76624025 + L1MB3 LINE L1 5350 5405 -778 1451 175 101 4 chr5 126461507 126461764 -76623768 + AluJo SINE Alu 22 303 -9 3466 180 62 27 chr5 126461764 126462507 -76623025 + L1MB3 LINE L1 5405 6179 -4 687 212 138 30 chr5 126462583 126462946 -76622586 - L1MEc LINE L1 -2882 3333 2932 * 4699 204 44 17 chr5 126462939 126464457 -76621075 - L1MC2 LINE L1 0 6344 4755 192 97 0 0 chr5 126464457 126464488 -76621044 + (TA)n Simple_repeat Simple_repeat 1 31 0 4699 204 44 17 chr5 126464488 126464979 -76620553 - L1MC2 LINE L1 -1589 4755 4279 1204 230 47 117 chr5 126464991 126465699 -76619833 - L1MEc LINE L1 -3323 2892 2297 5523 126 22 7 chr5 126465699 126467007 -76618525 - L1PA16 LINE L1 -7 6159 4842 1204 230 47 117 chr5 126467007 126467404 -76618128 - L1MEc LINE L1 -3918 2297 1874 532 273 47 42 chr5 126467417 126467798 -76617734 - L1MEc LINE L1 -4641 1755 1373 613 277 123 27 chr5 126467856 126468012 -76617520 - L1MEc LINE L1 -5166 1230 1090 1971 151 0 3 chr5 126468012 126468339 -76617193 - AluSx SINE Alu 0 312 1 613 277 123 27 chr5 126468339 126468735 -76616797 - L1MEc LINE L1 -5306 1090 625 318 132 0 0 chr5 126469930 126469983 -76615549 + (TC)n Simple_repeat Simple_repeat 2 54 0 243 177 48 0 chr5 126469985 126470047 -76615485 - L1MC4 LINE L1 -1339 6703 6639 1373 176 105 15 chr5 126470272 126470419 -76615113 - AluJb SINE Alu -21 291 159 180 0 0 0 chr5 126470419 126470439 -76615093 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1373 176 105 15 chr5 126470439 126470558 -76614974 - AluJb SINE Alu -153 159 1 253 224 30 0 chr5 126470929 126470996 -76614536 + MLT1K LTR MaLR 499 567 -21 1605 158 64 62 chr5 126470996 126471370 -76614162 - THE1C LTR MaLR 0 375 1 9290 125 41 27 chr5 126471370 126472928 -76612604 - THE1C-int LTR MaLR 0 1580 1 1907 173 16 27 chr5 126472928 126473304 -76612228 - THE1C LTR MaLR 0 375 4 202 333 108 0 chr5 126473343 126473436 -76612096 - MIR SINE MIR -62 146 44 203 258 180 11 chr5 126474685 126474774 -76610758 - MIR SINE MIR 0 262 159 305 221 15 0 chr5 126474774 126474842 -76610690 - MIR SINE MIR -31 231 163 247 295 128 0 chr5 126474972 126475050 -76610482 - MIR SINE MIR -164 98 11 562 287 27 6 chr5 126476310 126476470 -76609062 - MIR SINE MIR -59 149 37 2144 164 122 9 chr5 126477301 126477753 -76607779 - MLT1D LTR MaLR -2 503 1 2065 129 26 60 chr5 126477753 126478100 -76607432 + MER1B DNA MER1_type 1 337 0 257 188 12 25 chr5 126478218 126478298 -76607234 - L1PB4 LINE L1 -3 6153 6075 24 0 0 0 chr5 126478422 126478446 -76607086 + AT_rich Low_complexity Low_complexity 1 24 0 991 206 0 0 chr5 126478883 126479058 -76606474 - FAM SINE Alu 0 175 1 36 40 0 0 chr5 126479280 126479330 -76606202 + AT_rich Low_complexity Low_complexity 1 50 0 735 288 117 53 chr5 126479533 126480237 -76605295 + L1MC4a LINE L1 6101 6849 -959 25 0 0 0 chr5 126480338 126480363 -76605169 + AT_rich Low_complexity Low_complexity 1 25 0 196 349 0 45 chr5 126480628 126480694 -76604838 - L3 LINE CR1 -5 1572 1510 221 267 67 0 chr5 126480754 126480829 -76604703 - MER91C DNA MER1_type -20 120 41 183 80 0 0 chr5 126480829 126480854 -76604678 + (T)n Simple_repeat Simple_repeat 1 25 0 508 270 41 56 chr5 126580899 126581095 -76504437 + MIR SINE MIR 44 236 -26 223 253 11 11 chr5 126581310 126581401 -76504131 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 * 611 219 0 22 chr5 126581391 126581574 -76503958 + (TA)n Simple_repeat Simple_repeat 1 179 0 313 297 82 26 chr5 126581764 126581959 -76503573 - L1M4 LINE L1 -1784 4362 4157 6111 85 32 11 chr5 126581960 126582870 -76502662 - L1PA7 LINE L1 -2 6152 5214 29141 114 11 19 chr5 126583352 126588216 -76497316 - L1PA7 LINE L1 -1313 4833 11 35 24 0 0 chr5 126588282 126588324 -76497208 + AT_rich Low_complexity Low_complexity 1 42 0 1084 309 97 45 chr5 126588335 126588515 -76497017 + L2 LINE L2 2411 2580 -733 7074 60 0 0 chr5 126588515 126589866 -76495666 - L1PA5 LINE L1 0 6154 4802 1084 309 97 45 chr5 126589866 126590545 -76494987 + L2 LINE L2 2580 3313 0 183 42 0 0 chr5 126590799 126590823 -76494709 + (TC)n Simple_repeat Simple_repeat 1 24 0 216 67 0 0 chr5 126590839 126590869 -76494663 + (TG)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr5 126590967 126590996 -76494536 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 126591710 126591747 -76493785 + AT_rich Low_complexity Low_complexity 1 37 0 475 288 53 68 chr5 126591795 126592059 -76493473 - L1M4 LINE L1 -2407 3739 3480 346 292 86 6 chr5 126592183 126592522 -76493010 - L1MEc LINE L1 -4928 1659 1267 255 241 0 0 chr5 126592530 126592613 -76492919 - L1MEc LINE L1 -5172 1237 1155 2109 123 0 10 chr5 126593729 126594031 -76491501 - AluSc SINE Alu -10 299 1 529 179 2 27 chr5 126594116 126594234 -76491298 + MLT1A2 LTR MaLR 279 371 -3 2411 69 7 10 chr5 126594240 126594546 -76490986 + AluY SINE Alu 1 305 -6 22 35 0 0 chr5 126594843 126594872 -76490660 + AT_rich Low_complexity Low_complexity 1 29 0 246 357 12 0 chr5 126594916 126595000 -76490532 - L2 LINE L2 -670 2644 2560 1486 105 5 0 chr5 126595157 126595357 -76490175 - AluSp SINE Alu -13 300 100 240 397 31 31 chr5 126595492 126595782 -76489750 - L2 LINE L2 -921 2393 2104 193 291 197 8 chr5 126596026 126596153 -76489379 - L2 LINE L2 -882 2432 2282 4711 65 11 0 chr5 126596397 126597011 -76488521 + L1PA8 LINE L1 5552 6172 0 3407 217 56 22 chr5 126597240 126597734 -76487798 - L1MB5 LINE L1 -158 6016 5540 402 21 0 0 chr5 126597734 126597781 -76487751 + (CA)n Simple_repeat Simple_repeat 2 48 0 3407 217 56 22 chr5 126597781 126598614 -76486918 - L1MB5 LINE L1 -634 5540 4622 2011 134 0 23 chr5 126598614 126598921 -76486611 - AluSx SINE Alu -12 300 1 3407 217 56 22 chr5 126598921 126599291 -76486241 - L1MB5 LINE L1 -1552 4622 4266 2559 241 58 18 chr5 126599287 126600294 -76485238 - L1MB5 LINE L1 -2427 3719 2673 * 25259 31 7 0 chr5 126600443 126604308 -76481224 - L1PA4 LINE L1 -1 6154 2281 6030 77 0 0 chr5 126604311 126605114 -76480418 - L1PA4 LINE L1 -5340 806 4 539 213 28 14 chr5 126605145 126605286 -76480246 - Charlie4 DNA MER1_type -1686 275 133 21 57 0 0 chr5 126605808 126605843 -76479689 + AT_rich Low_complexity Low_complexity 1 35 0 820 201 32 0 chr5 126606442 126606596 -76478936 + FRAM SINE Alu 1 159 -17 34 0 0 0 chr5 126606601 126606635 -76478897 + AT_rich Low_complexity Low_complexity 1 34 0 467 308 35 14 chr5 126606743 126607036 -76478496 + L1ME4a LINE L1 5512 5775 -346 311 222 83 0 chr5 126607140 126607212 -76478320 + MIR SINE MIR 74 151 -111 21 0 0 0 chr5 126607235 126607256 -76478276 + AT_rich Low_complexity Low_complexity 1 21 0 330 309 109 0 chr5 126607268 126607378 -76478154 + MIR SINE MIR 133 254 -8 341 302 47 7 chr5 126607894 126608043 -76477489 + L1ME4a LINE L1 5962 6116 -5 234 128 0 0 chr5 126608369 126608408 -76477124 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 261 381 0 0 chr5 126608539 126608636 -76476896 - MLT1K LTR MaLR -353 235 139 29 0 0 0 chr5 126610397 126610426 -76475106 + AT_rich Low_complexity Low_complexity 1 29 0 375 284 78 14 chr5 126610531 126610672 -76474860 + MIR SINE MIR 42 191 -71 262 293 45 60 chr5 126611685 126611818 -76473714 - L2 LINE L2 0 3313 3183 426 277 61 38 chr5 126612538 126612774 -76472758 - MIR SINE MIR -7 255 16 303 307 78 63 chr5 126613185 126613455 -76472077 - L2 LINE L2 -911 2403 2130 1337 341 40 16 chr5 126613455 126614318 -76471214 - ERVL LTR ERVL -1723 3802 2865 429 223 67 74 chr5 126614359 126614628 -76470904 - LTR41 LTR ERVL -1 772 506 555 232 29 0 chr5 126615087 126615225 -76470307 - LTR41 LTR ERVL -581 192 51 1700 330 73 37 chr5 126615285 126616048 -76469484 - ERVL LTR ERVL -2909 2855 2042 2226 115 0 10 chr5 126616048 126616352 -76469180 - AluSx SINE Alu 0 312 12 1700 330 73 37 chr5 126616352 126616641 -76468891 - ERVL LTR ERVL -3722 2042 1765 301 363 38 52 chr5 126616765 126617192 -76468340 - ERVL LTR ERVL -4159 1605 1185 220 225 0 0 chr5 126617350 126617390 -76468142 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 286 314 57 34 chr5 126617660 126617835 -76467697 - LTR16C LTR ERVL -9 482 304 208 293 67 13 chr5 126619297 126619372 -76466160 + L2 LINE L2 2991 3069 -203 210 178 22 0 chr5 126619574 126619619 -76465913 + GA-rich Low_complexity Low_complexity 2 47 0 22 0 0 0 chr5 126620509 126620531 -76465001 + AT_rich Low_complexity Low_complexity 1 22 0 330 248 71 71 chr5 126621135 126621333 -76464199 + MIR SINE MIR 49 246 -16 459 0 0 0 chr5 126621745 126621796 -76463736 + (CA)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr5 126621795 126621833 -76463699 + (TA)n Simple_repeat Simple_repeat 2 39 0 * 1796 173 51 13 chr5 126623527 126623921 -76461611 - L1MC2 LINE L1 0 6344 5936 405 0 0 0 chr5 126624799 126624844 -76460688 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 35 0 0 chr5 126625607 126625636 -76459896 + AT_rich Low_complexity Low_complexity 1 29 0 209 365 10 10 chr5 126625801 126625897 -76459635 - MIR3 SINE MIR -50 158 63 300 258 26 13 chr5 126627884 126628035 -76457497 + (TTATA)n Simple_repeat Simple_repeat 2 154 0 2429 67 0 3 chr5 126629709 126630007 -76455525 + AluY SINE Alu 1 297 -14 1969 111 67 17 chr5 126631031 126631328 -76454204 - AluSx SINE Alu 0 312 1 271 290 0 0 chr5 126631587 126631656 -76453876 - MIR3 SINE MIR -1 207 139 309 51 0 0 chr5 126631952 126631991 -76453541 + (CA)n Simple_repeat Simple_repeat 1 39 0 1968 107 10 3 chr5 126632183 126632482 -76453050 - L1PA14 LINE L1 0 6161 5861 583 298 6 12 chr5 126632600 126632761 -76452771 + MIR SINE MIR 8 167 -95 1848 126 67 0 chr5 126633028 126633313 -76452219 - AluSc SINE Alu -5 304 1 21 57 0 0 chr5 126633375 126633410 -76452122 + AT_rich Low_complexity Low_complexity 1 35 0 1901 193 63 27 chr5 126633591 126634067 -76451465 + MLT1D LTR MaLR 1 493 -12 2142 221 70 2 chr5 126634078 126634622 -76450910 + MLT1D-int LTR MaLR 1 581 -790 745 172 51 112 chr5 126634622 126634837 -76450695 + MLT1-int LTR MaLR 460 661 -710 484 253 0 0 chr5 126634965 126635064 -76450468 + MLT1-int LTR MaLR 692 790 -581 396 269 103 36 chr5 126635281 126635504 -76450028 - MER46C DNA MER2_type -83 255 18 191 333 47 21 chr5 126635604 126635796 -76449736 - L2 LINE L2 -240 3032 2836 2111 153 33 29 chr5 126638599 126639147 -76446385 + MLT2A2 LTR ERVL 2 554 0 334 343 132 55 chr5 126639913 126640315 -76445217 + L2 LINE L2 2837 3269 -3 28 29 0 0 chr5 126643071 126643106 -76442426 + AT_rich Low_complexity Low_complexity 1 35 0 441 0 0 0 chr5 126643637 126643686 -76441846 + (TG)n Simple_repeat Simple_repeat 2 50 0 424 241 0 0 chr5 126643690 126643777 -76441755 + MIR SINE MIR 63 149 -113 252 226 0 0 chr5 126643838 126643900 -76441632 + (TA)n Simple_repeat Simple_repeat 1 62 0 23 33 0 0 chr5 126644058 126644088 -76441444 + AT_rich Low_complexity Low_complexity 1 30 0 2247 56 0 0 chr5 126644309 126644579 -76440953 - AluY SINE Alu -21 290 21 997 334 141 31 chr5 126645845 126646754 -76438778 - L2 LINE L2 0 3313 2299 450 226 11 0 chr5 126648250 126648343 -76437189 + HAL1 LINE L1 1675 1768 -739 283 266 0 121 chr5 126648819 126648897 -76436635 + Charlie8 DNA MER1_type 95 181 -160 1792 179 0 0 chr5 126648897 126649177 -76436355 + AluJb SINE Alu 1 280 -32 360 64 0 0 chr5 126649179 126649226 -76436306 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 283 266 0 121 chr5 126649226 126649317 -76436215 + Charlie8 DNA MER1_type 182 246 -95 199 346 85 39 chr5 126649354 126649484 -76436048 - MIR SINE MIR -126 136 1 213 246 16 16 chr5 126649773 126649834 -76435698 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 3032 139 43 18 chr5 126649914 126650030 -76435502 - L1MA9 LINE L1 -30 6282 6170 309 51 0 0 chr5 126650030 126650069 -76435463 + (TG)n Simple_repeat Simple_repeat 1 39 0 3032 139 43 18 chr5 126650069 126650514 -76435018 - L1MA9 LINE L1 -142 6170 5707 2531 57 0 0 chr5 126651281 126651577 -76433955 - AluY SINE Alu -15 296 1 23 0 0 0 chr5 126651578 126651601 -76433931 + AT_rich Low_complexity Low_complexity 1 23 0 1056 92 0 0 chr5 126652237 126652378 -76433154 - L1PA11 LINE L1 -21 6153 6013 1297 229 149 58 chr5 126653545 126654147 -76431385 - MER77 LTR ERV1 -7 598 57 5379 223 53 56 chr5 126654306 126655009 -76430523 + L1MC4a LINE L1 5597 6301 -1507 1800 168 79 50 chr5 126655009 126655156 -76430376 - MSTA LTR MaLR 0 428 287 1953 145 3 10 chr5 126655156 126655460 -76430072 - AluSx SINE Alu -10 302 1 1800 168 79 50 chr5 126655460 126655728 -76429804 - MSTA LTR MaLR -141 287 1 5379 223 53 56 chr5 126655728 126656749 -76428783 + L1MC4a LINE L1 6301 7316 -492 21 36 0 0 chr5 126657065 126657093 -76428439 + AT_rich Low_complexity Low_complexity 1 28 0 1291 33 0 0 chr5 126657657 126657809 -76427723 + L1PA3 LINE L1 5999 6150 -5 8663 223 45 30 chr5 126658262 126658655 -76426877 - L1MB8 LINE L1 -1 6177 5791 1991 120 51 20 chr5 126658655 126659005 -76426527 + MER46B DNA MER2_type 1 236 0 8663 223 45 30 chr5 126659005 126659498 -76426034 - L1MB8 LINE L1 -387 5791 5307 1039 141 20 15 chr5 126659498 126659696 -76425836 - L1MA6 LINE L1 0 6300 6102 8663 223 45 30 chr5 126659696 126662617 -76422915 - L1MB8 LINE L1 -871 5307 2294 303 241 0 0 chr5 126662648 126662727 -76422805 - L1MEc LINE L1 -4580 1816 1738 1653 247 80 36 chr5 126662760 126663716 -76421816 - L1M4c LINE L1 -4451 2687 1543 262 308 49 68 chr5 126663716 126664045 -76421487 + MLT1K LTR MaLR 205 553 -62 317 252 63 118 chr5 126665480 126665694 -76419838 + MIR SINE MIR 1 205 -26 6959 17 1 0 chr5 126666678 126667481 -76418051 - L1PA2 LINE L1 0 6155 5352 1511 21 0 0 chr5 126667501 126667687 -76417845 + L1P LINE L1 5154 5339 -807 23 0 0 0 chr5 126669052 126669075 -76416457 + AT_rich Low_complexity Low_complexity 1 23 0 310 290 119 72 chr5 126670885 126671178 -76414354 - L1M2 LINE L1 -5880 969 663 494 288 112 101 chr5 126671195 126671850 -76413682 + L1M2 LINE L1 387 927 -5922 180 0 0 0 chr5 126671850 126671870 -76413662 + (CTG)n Simple_repeat Simple_repeat 2 21 0 494 288 112 101 chr5 126671870 126672327 -76413205 + L1M2 LINE L1 927 1377 -5472 288 254 0 0 chr5 126672405 126672472 -76413060 + (CGG)n Simple_repeat Simple_repeat 1 67 0 32 26 0 0 chr5 126674414 126674453 -76411079 + AT_rich Low_complexity Low_complexity 1 39 0 381 287 84 18 chr5 126674846 126675013 -76410519 - MIR3 SINE MIR -14 194 17 27 0 0 0 chr5 126675874 126675901 -76409631 + AT_rich Low_complexity Low_complexity 1 27 0 795 216 30 125 chr5 126677377 126677641 -76407891 - MER8 DNA MER2_type 0 239 1 664 313 50 32 chr5 126678174 126678516 -76407016 - L1MC4a LINE L1 -1905 5903 5556 355 323 73 36 chr5 126679506 126679698 -76405834 - L3 LINE CR1 -26 1551 1353 1213 303 154 47 chr5 126679742 126681022 -76404510 - L2 LINE L2 -61 3252 1822 353 307 307 16 chr5 126681014 126681447 -76404085 - L3 LINE CR1 -278 1299 741 * 381 329 40 20 chr5 126681749 126681901 -76403631 - L3 LINE CR1 -1066 511 357 300 241 51 29 chr5 126681963 126682100 -76403432 - L1ME4a LINE L1 0 6121 5982 349 292 56 14 chr5 126682318 126682462 -76403070 - L1ME4a LINE L1 -422 5699 5550 909 218 5 38 chr5 126682893 126683104 -76402428 + MIR SINE MIR 59 262 0 240 35 0 0 chr5 126685332 126685361 -76400171 + (TA)n Simple_repeat Simple_repeat 1 29 0 1384 196 47 36 chr5 126686180 126686481 -76399051 + AluJo SINE Alu 1 304 -8 671 309 51 8 chr5 126687044 126687280 -76398252 + MIR SINE MIR 17 262 0 1165 174 0 70 chr5 126687484 126687725 -76397807 + MER58A DNA MER1_type 1 224 0 220 79 132 0 chr5 126688818 126688970 -76396562 + (TA)n Simple_repeat Simple_repeat 1 172 0 224 167 14 42 chr5 126688972 126689044 -76396488 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 256 103 109 0 chr5 126689051 126689207 -76396325 + (TA)n Simple_repeat Simple_repeat 2 174 0 27 73 0 0 chr5 126689208 126689263 -76396269 + AT_rich Low_complexity Low_complexity 1 55 0 29 28 0 0 chr5 126689377 126689413 -76396119 + AT_rich Low_complexity Low_complexity 1 36 0 329 306 147 6 chr5 126689844 126690014 -76395518 + MIR SINE MIR 51 244 -18 2221 112 10 0 chr5 126692846 126693149 -76392383 - AluSx SINE Alu -6 306 1 208 374 12 0 chr5 126693301 126693384 -76392148 - MIR SINE MIR -1 261 178 350 275 36 47 chr5 126694064 126694257 -76391275 + MER117 DNA MER1_type 6 196 -1 205 263 11 11 chr5 126694559 126694654 -76390878 + CT-rich Low_complexity Low_complexity 3 97 0 192 310 42 28 chr5 126694801 126694872 -76390660 + L2 LINE L2 2771 2842 -472 381 93 0 0 chr5 126694885 126694939 -76390593 + (CA)n Simple_repeat Simple_repeat 1 54 0 192 355 58 22 chr5 126694984 126695122 -76390410 + L2 LINE L2 2942 3084 -188 2287 88 0 16 chr5 126695278 126695584 -76389948 + AluY SINE Alu 1 301 -10 253 317 0 0 chr5 126695585 126695645 -76389887 - MIR SINE MIR -140 122 63 185 373 144 0 chr5 126695677 126695795 -76389737 + L2 LINE L2 3133 3267 -5 247 265 51 10 chr5 126698070 126698168 -76387364 - HAL1 LINE L1 -857 1650 1549 246 105 0 0 chr5 126698468 126698506 -76387026 + (TG)n Simple_repeat Simple_repeat 2 39 0 756 272 63 0 chr5 126698741 126698947 -76386585 + MIR SINE MIR 8 226 -36 245 383 0 0 chr5 126699324 126699405 -76386127 + MIR SINE MIR 43 123 -85 288 310 14 62 chr5 126699959 126700104 -76385428 - MIR SINE MIR -68 140 2 518 328 7 17 chr5 126700731 126700918 -76384614 - MIR SINE MIR -67 141 1 287 239 30 15 chr5 126701418 126701485 -76384047 - MLT1J1 LTR MaLR -308 138 71 331 276 34 34 chr5 126701581 126701733 -76383799 - MIR SINE MIR -67 141 42 22 0 0 0 chr5 126702974 126702996 -76382536 + AT_rich Low_complexity Low_complexity 1 22 0 882 277 104 62 chr5 126702998 126704332 -76381200 - L1MC4a LINE L1 -743 5403 4672 384 296 191 46 chr5 126705143 126705582 -76379950 + L2 LINE L2 2013 2515 -799 6811 190 15 20 chr5 126705804 126705932 -76379600 - L1PA15 LINE L1 -7 6158 6031 2264 96 7 0 chr5 126705932 126706225 -76379307 - AluSg SINE Alu -15 295 1 6811 190 15 20 chr5 126706225 126706770 -76378762 - L1PA15 LINE L1 -134 6031 5485 2232 111 0 3 chr5 126706770 126707068 -76378464 - AluSq SINE Alu -16 297 1 6811 190 15 20 chr5 126707068 126708674 -76376858 - L1PA15 LINE L1 -680 5485 3902 229 167 0 0 chr5 126708676 126708712 -76376820 - 5S rRNA rRNA -85 36 1 4070 211 10 27 chr5 126708712 126709703 -76375829 - L1PA15 LINE L1 -2228 3918 2945 859 307 29 70 chr5 126709777 126710501 -76375031 + L2 LINE L2 2616 3313 0 289 320 191 4 chr5 126711049 126711345 -76374187 - L2 LINE L2 -233 3039 2690 207 330 108 58 chr5 126711386 126711765 -76373767 - L2 LINE L2 -1121 2193 1796 646 281 33 25 chr5 126712518 126712792 -76372740 - MARNA DNA Mariner -143 443 168 391 246 59 8 chr5 126712853 126712971 -76372561 - MER20B DNA MER1_type -624 159 36 2381 67 0 0 chr5 126715072 126715389 -76370143 - AluY SINE Alu 0 317 1 2025 285 76 49 chr5 126715626 126717650 -76367882 - HAL1 LINE L1 -170 2337 92 341 353 86 27 chr5 126718391 126718578 -76366954 + MIR3 SINE MIR 2 199 -9 189 0 0 0 chr5 126719247 126719268 -76366264 + (TC)n Simple_repeat Simple_repeat 2 22 0 342 206 10 69 chr5 126719760 126719862 -76365670 + MER103 DNA DNA 29 124 -42 2749 152 17 97 chr5 126720702 126721282 -76364250 - MLT2B3 LTR ERVL -20 534 1 2117 108 3 11 chr5 126722649 126722973 -76362559 - AluSq SINE Alu 0 322 1 21 57 0 0 chr5 126723497 126723532 -76362000 + AT_rich Low_complexity Low_complexity 1 35 0 1818 236 47 24 chr5 126724192 126724279 -76361253 - L1MB8 LINE L1 0 6178 6092 1152 274 53 91 chr5 126724279 126725254 -76360278 - L1MD2 LINE L1 -261 6098 5161 901 219 92 0 chr5 126728567 126728763 -76356769 + MER58C DNA MER1_type 1 214 -1 1678 161 3 28 chr5 126729101 126729392 -76356140 + AluJo SINE Alu 7 290 -22 198 0 0 0 chr5 126730654 126730676 -76354856 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1861 97 0 0 chr5 126730690 126730928 -76354604 - AluSx SINE Alu -25 287 50 417 143 0 0 chr5 126730928 126730991 -76354541 - L1P4 LINE L1 -610 5555 5493 2232 103 0 22 chr5 126730991 126731303 -76354229 - AluSq SINE Alu -8 305 1 2140 154 11 8 chr5 126731584 126731948 -76353584 + MLT1A1 LTR MaLR 1 365 0 215 254 0 17 chr5 126732382 126732441 -76353091 + L2 LINE L2 3202 3259 -13 301 321 47 0 chr5 126732522 126732628 -76352904 + L2 LINE L2 3162 3272 0 329 382 36 32 chr5 126733031 126733340 -76352192 - L2 LINE L2 -76 3196 2887 479 277 114 26 chr5 126733544 126733851 -76351681 + MER113 DNA MER1_type? 155 488 -33 315 329 26 26 chr5 126733922 126734077 -76351455 - L2 LINE L2 -567 2747 2593 730 221 46 57 chr5 126734831 126735111 -76350421 + L2 LINE L2 1009 1285 -2029 356 224 26 167 chr5 126735111 126735286 -76350246 + L2 LINE L2 2562 2699 -615 1605 161 77 7 chr5 126735286 126735559 -76349973 + AluJb SINE Alu 1 292 -20 356 224 26 167 chr5 126735559 126735611 -76349921 + L2 LINE L2 2699 2757 -557 997 218 169 23 chr5 126735634 126735982 -76349550 - L1M4 LINE L1 -2205 3941 3543 10059 211 42 43 chr5 126738050 126741892 -76343640 - L1MC3 LINE L1 -743 5683 2496 4353 111 88 100 chr5 126741892 126743319 -76342213 + pTR5 LTR ERV1 66 2438 0 959 190 24 19 chr5 126743319 126743580 -76341952 - L1MC3 LINE L1 -3926 2500 2238 * 2487 172 27 69 chr5 126743568 126744202 -76341330 - L1MC3 LINE L1 -5247 1179 573 960 215 42 23 chr5 126744218 126744478 -76341054 - L1MC3 LINE L1 -5802 624 360 709 251 58 43 chr5 126744533 126744860 -76340672 - L1MC3 LINE L1 -6074 352 21 914 210 45 0 chr5 126746178 126746378 -76339154 + MER3 DNA MER1_type 1 209 0 297 169 0 0 chr5 126746421 126746480 -76339052 + (TG)n Simple_repeat Simple_repeat 2 60 0 210 281 0 18 chr5 126746689 126746746 -76338786 + GA-rich Low_complexity Low_complexity 2 57 0 222 37 0 0 chr5 126747980 126748007 -76337525 + (CAA)n Simple_repeat Simple_repeat 1 27 0 226 193 110 83 chr5 126748836 126748878 -76336654 + MER112 DNA MER1_type 148 187 -73 737 159 115 13 chr5 126748878 126749035 -76336497 - MER5B DNA MER1_type -2 176 4 226 193 110 83 chr5 126749035 126749101 -76336431 + MER112 DNA MER1_type 187 259 -1 248 277 69 20 chr5 126749307 126749408 -76336124 + L1MEd LINE L1 954 1059 -5471 310 308 40 10 chr5 126749664 126749917 -76335615 + L1MEd LINE L1 1846 2100 -4440 706 292 57 29 chr5 126750315 126750907 -76334625 + L1MEd LINE L1 2608 3216 -3324 199 120 20 20 chr5 126751628 126751678 -76333854 + (TA)n Simple_repeat Simple_repeat 1 50 0 265 179 54 0 chr5 126751857 126751913 -76333619 + MIR SINE MIR 86 144 -64 2263 101 7 0 chr5 126752402 126752710 -76332822 + AluSg SINE Alu 1 310 0 193 286 36 18 chr5 126753208 126753264 -76332268 + MIR SINE MIR 34 90 -118 236 250 43 76 chr5 126753531 126753623 -76331909 - L2 LINE L2 0 3313 3225 22 0 0 30 chr5 126755843 126755856 -76329676 + AT_rich Low_complexity Low_complexity 1 13 -19 2014 138 0 10 chr5 126755856 126756152 -76329380 - AluSx SINE Alu -19 293 1 22 0 0 30 chr5 126756152 126756171 -76329361 + AT_rich Low_complexity Low_complexity 13 32 0 808 146 41 0 chr5 126756171 126756294 -76329238 + AluSg/x SINE Alu 154 281 -29 756 184 6 24 chr5 126756310 126756478 -76329054 - MER3 DNA MER1_type -44 165 1 285 29 0 0 chr5 126759267 126759301 -76326231 + (CA)n Simple_repeat Simple_repeat 2 35 0 513 241 78 35 chr5 126760089 126760400 -76325132 + MER20B DNA MER1_type 1 354 -429 22 0 0 0 chr5 126760981 126761003 -76324529 + AT_rich Low_complexity Low_complexity 1 22 0 2344 90 0 3 chr5 126761006 126761307 -76324225 + AluY SINE Alu 1 300 -11 585 273 12 24 chr5 126761974 126762139 -76323393 - MER5B DNA MER1_type -3 175 13 552 299 109 50 chr5 126762790 126763128 -76322404 - HAL1 LINE L1 -1039 1468 1111 2601 85 14 3 chr5 126763204 126763569 -76321963 - L1PA8 LINE L1 -4 6168 5800 217 154 0 26 chr5 126763659 126763698 -76321834 + CT-rich Low_complexity Low_complexity 3 40 0 233 348 48 19 chr5 126763724 126763931 -76321601 - HAL1 LINE L1 -1644 863 651 557 249 77 4 chr5 126764268 126764501 -76321031 - L1MEc LINE L1 -4094 2302 2053 14044 137 25 13 chr5 126764508 126766897 -76318635 + Tigger1 DNA MER2_type 1 2418 0 1080 259 50 13 chr5 126767011 126767393 -76318139 - L1MEc LINE L1 -5961 435 40 358 226 21 0 chr5 126767434 126767527 -76318005 - HAL1 LINE L1 -2366 141 47 1829 161 0 14 chr5 126769617 126769935 -76315597 - AluSx SINE Alu 0 314 1 24 0 0 0 chr5 126772974 126772998 -76312534 + AT_rich Low_complexity Low_complexity 1 24 0 452 317 128 62 chr5 126772998 126773437 -76312095 - L2 LINE L2 -1 3271 2804 2234 97 3 10 chr5 126774722 126775020 -76310512 + AluSp SINE Alu 1 296 -17 23 0 0 0 chr5 126775495 126775518 -76310014 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 126775864 126775888 -76309644 + AT_rich Low_complexity Low_complexity 1 24 0 573 256 58 32 chr5 126780216 126780372 -76305160 - MER5B DNA MER1_type -16 162 3 1632 150 38 50 chr5 126780558 126780898 -76304634 + MER2 DNA MER2_type 1 336 -9 208 277 96 21 chr5 126780997 126781091 -76304441 + MIR3 SINE MIR 106 206 -2 853 241 31 0 chr5 126783106 126783301 -76302231 - MIR SINE MIR 0 262 62 741 224 47 0 chr5 126784630 126784822 -76300710 - MER20 DNA MER1_type 0 219 19 1687 0 35 10 chr5 126785429 126785628 -76299904 - L1PA2 LINE L1 -3 6152 5949 702 0 0 0 chr5 126785628 126785711 -76299821 + L1HS LINE L1 5749 5831 -324 2092 91 56 7 chr5 126785827 126786112 -76299420 - AluSp SINE Alu -14 299 1 19471 142 28 21 chr5 126787737 126792450 -76293082 + L1PA11 LINE L1 1433 6174 0 2094 128 10 13 chr5 126792653 126792966 -76292566 - AluSx SINE Alu 0 312 1 279 0 0 0 chr5 126793104 126793135 -76292397 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 314 39 0 chr5 126793293 126793344 -76292188 + L2 LINE L2 3212 3264 -8 937 185 0 0 chr5 126793712 126793869 -76291663 + L1PB4 LINE L1 6000 6156 0 190 343 96 36 chr5 126795342 126795508 -76290024 - MIR3 SINE MIR -30 178 3 544 202 43 101 chr5 126800828 126801036 -76284496 + MER113 DNA MER1_type? 227 422 -99 218 185 0 74 chr5 126801107 126801161 -76284371 - MIR3 SINE MIR -49 159 110 230 182 23 0 chr5 126801902 126801946 -76283586 + L2 LINE L2 3267 3311 -2 243 0 0 0 chr5 126807509 126807536 -76277996 + (T)n Simple_repeat Simple_repeat 1 27 0 330 252 55 55 chr5 126808754 126808881 -76276651 + MIR SINE MIR 19 145 -63 3151 121 62 8 chr5 126809413 126809910 -76275622 + MER1A DNA MER1_type 3 526 -1 560 207 27 9 chr5 126810354 126810465 -76275067 + FLAM_A SINE Alu 1 113 -29 261 198 35 12 chr5 126810498 126810584 -76274948 + GA-rich Low_complexity Low_complexity 2 89 0 197 290 87 0 chr5 126810820 126810889 -76274643 - MIR SINE MIR -70 192 118 23 0 0 0 chr5 126812540 126812563 -76272969 + AT_rich Low_complexity Low_complexity 1 23 0 585 290 127 32 chr5 126813081 126813553 -76271979 + L1MC4 LINE L1 3626 4142 -2004 180 111 0 0 chr5 126813615 126813642 -76271890 + (CA)n Simple_repeat Simple_repeat 2 28 0 365 20 0 39 chr5 126813869 126813920 -76271612 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 411 286 112 40 chr5 126813955 126814259 -76271273 + L1MC4 LINE L1 5292 5617 -2191 219 140 0 0 chr5 126814490 126814540 -76270992 + (GA)n Simple_repeat Simple_repeat 2 51 0 5784 105 3 43 chr5 126815426 126816700 -76268832 + L1PA13 LINE L1 4938 6158 -5 2228 90 20 7 chr5 126816711 126817011 -76268521 + AluSp SINE Alu 1 304 -9 1781 255 92 97 chr5 126817102 126819296 -76266236 + L1MC4a LINE L1 4407 5288 -858 1792 83 4 0 chr5 126819328 126819569 -76265963 + L1PA13 LINE L1 5903 6144 -19 479 184 23 17 chr5 126819575 126819749 -76265783 + GA-rich Low_complexity Low_complexity 4 178 0 5627 64 17 18 chr5 126819778 126820545 -76264987 + MER4E LTR ERV1 1 766 0 2181 232 91 43 chr5 126820571 126821735 -76263797 + L1MC4 LINE L1 6702 8036 -6 272 320 59 50 chr5 126822165 126822384 -76263148 - L2 LINE L2 -1729 1585 1365 609 279 170 4 chr5 126822398 126822627 -76262905 + L3 LINE CR1 1205 1471 -106 1700 133 77 14 chr5 126822667 126822953 -76262579 + AluSx SINE Alu 1 304 -8 198 0 0 0 chr5 126823391 126823413 -76262119 + (TG)n Simple_repeat Simple_repeat 2 23 0 245 309 32 11 chr5 126823435 126823529 -76262003 - L1ME LINE L1 -401 5769 5674 450 204 104 10 chr5 126823789 126823998 -76261534 - MER5C DNA MER1_type -3 321 2 336 320 125 14 chr5 126824002 126824299 -76261233 - L1ME LINE L1 -514 5648 5319 243 261 0 0 chr5 126824408 126824477 -76261055 - L1P LINE L1 -2386 3760 3692 591 350 45 21 chr5 126824572 126825055 -76260477 - L1ME LINE L1 -2562 3584 3090 258 32 0 0 chr5 126825250 126825281 -76260251 + (TA)n Simple_repeat Simple_repeat 2 32 0 1995 276 31 22 chr5 126825317 126825992 -76259540 - L1ME3A LINE L1 -124 6029 5349 424 276 123 30 chr5 126826177 126826445 -76259087 - L1ME3A LINE L1 -4862 1257 965 242 332 26 84 chr5 126826452 126826642 -76258890 + L2 LINE L2 2860 3038 -275 374 214 31 0 chr5 126826642 126826740 -76258792 + L1M4 LINE L1 2932 3032 -3114 1539 273 100 52 chr5 126826755 126827331 -76258201 + L1M4 LINE L1 3155 3702 -2444 249 108 0 0 chr5 126827331 126827368 -76258164 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1539 273 100 52 chr5 126827368 126828485 -76257047 + L1M4 LINE L1 3702 4940 -1206 1874 112 28 28 chr5 126829102 126829188 -76256344 + AluSq SINE Alu 1 86 -228 1483 192 170 34 chr5 126829188 126829636 -76255896 - LTR22 LTR ERVK 0 509 1 1874 112 28 28 chr5 126829636 126829863 -76255669 + AluSq SINE Alu 85 314 0 22 0 0 0 chr5 126831016 126831038 -76254494 + AT_rich Low_complexity Low_complexity 1 22 0 283 307 153 11 chr5 126831107 126831283 -76254249 - MIR SINE MIR -59 203 3 240 331 18 60 chr5 126832467 126832633 -76252899 + L2 LINE L2 2957 3115 -157 2942 171 0 13 chr5 126834214 126834751 -76250781 + L1PA13 LINE L1 3906 4435 -1711 5768 94 38 7 chr5 126835153 126836631 -76248901 + L1PA13 LINE L1 4670 6160 -3 295 219 16 130 chr5 126836702 126836825 -76248707 + MER102b DNA MER1_type 233 341 0 1956 164 0 0 chr5 126838353 126838657 -76246875 - AluSx SINE Alu -8 304 1 1535 257 60 47 chr5 126838984 126839707 -76245825 + L1ME2 LINE L1 4511 5242 -904 368 302 43 0 chr5 126839739 126839855 -76245677 + L1ME2 LINE L1 5544 5664 -502 1354 199 91 29 chr5 126839868 126840240 -76245292 + L1ME2 LINE L1 5779 6332 -2 23215 48 1 1 chr5 126840538 126844240 -76241292 - L1PA5 LINE L1 -8 6146 2437 34657 63 2 2 chr5 126844341 126849127 -76236405 - L1P LINE L1 -1353 4793 2 293 120 0 0 chr5 126849727 126849777 -76235755 + L1MA3 LINE L1 6256 6305 0 280 328 57 25 chr5 126850133 126850255 -76235277 + L2 LINE L2 3186 3311 -2 455 325 7 7 chr5 126850591 126850745 -76234787 + MIR3 SINE MIR 39 193 -15 204 321 29 29 chr5 126851357 126851494 -76234038 + L2 LINE L2 2685 2821 -493 3539 123 0 4 chr5 126851755 126852267 -76233265 + MER9 LTR ERVK 2 511 0 487 301 144 20 chr5 126852709 126853064 -76232468 + L1MEc LINE L1 802 1200 -5196 234 257 48 76 chr5 126853112 126853322 -76232210 + L1MEc LINE L1 1184 1387 -4828 5213 125 11 11 chr5 126853326 126854163 -76231369 - L1PA12 LINE L1 -1 6167 5331 287 257 126 33 chr5 126854267 126854450 -76231082 + L1MEc LINE L1 1585 1784 -4612 5215 209 22 24 chr5 126854881 126855416 -76230116 + L1MEc LINE L1 2264 2799 -3416 2441 86 0 6 chr5 126855416 126855729 -76229803 + AluY SINE Alu 1 311 0 5215 209 22 24 chr5 126855729 126856597 -76228935 + L1MEc LINE L1 2799 3686 -2529 * 24955 148 22 14 chr5 126856594 126862918 -76222614 + L1PA8A LINE L1 3 6445 -1 6372 170 9 74 chr5 126862916 126864421 -76221111 + L1P LINE L1 3603 5009 -1137 * 5640 143 21 8 chr5 126864421 126864762 -76220770 + L1PA13 LINE L1 4620 4955 -1208 3665 109 0 4 chr5 126864762 126865275 -76220257 - MER9 LTR ERVK 0 511 1 5640 143 21 8 chr5 126865275 126866421 -76219111 + L1PA13 LINE L1 4955 6122 -41 1579 148 61 71 chr5 126866421 126866800 -76218732 - THE1C LTR MaLR 0 375 1 815 126 21 21 chr5 126866800 126866943 -76218589 - THE1C-int LTR MaLR 0 1580 1438 7545 136 90 13 chr5 126866943 126868249 -76217283 - THE1C-int LTR MaLR -38 1542 136 2350 280 82 54 chr5 126868239 126869961 -76215571 + L1ME3 LINE L1 2540 4213 -1933 * 779 180 0 0 chr5 126869961 126870089 -76215443 + FLAM_C SINE Alu 1 128 -5 2350 280 82 54 chr5 126870089 126870237 -76215295 + L1ME3 LINE L1 4213 4355 -1791 2366 94 0 0 chr5 126870237 126870534 -76214998 - AluSg SINE Alu -13 297 1 2350 280 82 54 chr5 126870534 126870743 -76214789 + L1ME3 LINE L1 4355 4677 -1469 1448 272 88 22 chr5 126870889 126871775 -76213757 + L1ME3 LINE L1 5107 6058 -104 344 297 122 53 chr5 126873358 126873621 -76211911 - MLT1H LTR MaLR -228 321 41 263 178 0 0 chr5 126875467 126875529 -76210003 + L1ME LINE L1 5592 5653 -468 278 314 214 19 chr5 126876615 126876825 -76208707 - MIR SINE MIR -2 260 10 295 247 111 37 chr5 126876967 126877048 -76208484 + L2 LINE L2 3211 3297 -16 598 174 15 53 chr5 126877085 126877217 -76208315 - AluJb SINE Alu -9 303 177 450 315 44 6 chr5 126878086 126878267 -76207265 - MIR SINE MIR -62 200 13 1604 157 94 26 chr5 126878529 126878879 -76206653 - THE1C LTR MaLR 0 375 2 383 192 13 0 chr5 126879129 126879207 -76206325 + MLT2B2 LTR ERVL 40 118 -397 2254 183 22 7 chr5 126879213 126879617 -76205915 - MSTB LTR MaLR -16 410 1 2677 58 0 3 chr5 126879649 126880052 -76205480 - L1P3 LINE L1 -558 5596 5195 * 11742 87 13 2 chr5 126880047 126881693 -76203839 + L1P3 LINE L1 3518 5180 -966 1471 134 1 8 chr5 126881691 126882060 -76203472 - L1P5 LINE L1 -676 5475 5110 * 340 254 42 0 chr5 126882060 126882131 -76203401 + Tigger3(Golem) DNA MER2_type 2955 3028 -1 5911 168 21 6 chr5 126882398 126884321 -76201211 - L1PB4 LINE L1 -3 6153 4200 254 308 0 0 chr5 126884421 126884499 -76201033 + L1ME LINE L1 5735 5812 -309 21 82 0 0 chr5 126884696 126884745 -76200787 + AT_rich Low_complexity Low_complexity 1 49 0 7210 41 6 1 chr5 126885482 126886993 -76198539 + L1PA4 LINE L1 4637 6153 -2 228 289 50 41 chr5 126887028 126887149 -76198383 - L2 LINE L2 0 3313 3192 493 241 9 9 chr5 126887166 126887278 -76198254 - MER91B DNA MER1_type -51 139 28 2328 121 16 29 chr5 126887302 126887681 -76197851 + THE1C LTR MaLR 2 375 0 12853 156 32 21 chr5 126888442 126890830 -76194702 - Tigger1 DNA MER2_type 0 2418 5 4234 167 35 35 chr5 126892869 126894057 -76191475 - L1MC1 LINE L1 0 6333 5186 276 77 0 0 chr5 126894903 126894942 -76190590 + (A)n Simple_repeat Simple_repeat 1 39 0 361 312 103 34 chr5 126895538 126895772 -76189760 + MER102a DNA MER1_type 81 330 0 1085 246 17 4 chr5 126895935 126896167 -76189365 + L1M4 LINE L1 562 796 -5746 8272 201 27 43 chr5 126896181 126898535 -76186997 - L1M2 LINE L1 -517 5783 3510 1595 182 21 4 chr5 126898535 126898815 -76186717 - AluJb SINE Alu -23 289 5 8272 201 27 43 chr5 126898815 126898951 -76186581 - L1M2 LINE L1 -2790 3510 3373 270 73 0 0 chr5 126899268 126899309 -76186223 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 250 215 46 31 chr5 126899899 126899964 -76185568 - MER4B-int LTR ERV1 -5547 1211 1146 274 313 120 20 chr5 126900377 126900527 -76185005 + MIR3 SINE MIR 38 202 -6 22 0 0 0 chr5 126900800 126900822 -76184710 + AT_rich Low_complexity Low_complexity 1 22 0 260 143 63 32 chr5 126901081 126901144 -76184388 + GA-rich Low_complexity Low_complexity 4 68 0 235 287 57 57 chr5 126903183 126903305 -76182227 + MIR3 SINE MIR 42 163 -45 195 114 0 0 chr5 126903588 126903623 -76181909 + (TG)n Simple_repeat Simple_repeat 2 36 0 814 313 67 26 chr5 126903660 126904078 -76181454 - MLT1L LTR MaLR -132 483 49 9969 155 25 6 chr5 126904395 126906043 -76179489 - Tigger1 DNA MER2_type -733 1685 6 1963 212 15 12 chr5 126906554 126906964 -76178568 + LTR57 LTR ERVL 1 411 0 800 293 91 23 chr5 126907029 126907381 -76178151 + L2 LINE L2 2932 3307 -6 675 187 33 13 chr5 126907602 126907752 -76177780 + L1M4 LINE L1 38 190 -6352 454 270 49 43 chr5 126907957 126908142 -76177390 + MER110 LTR ERV1 286 471 -20 227 297 99 0 chr5 126908210 126908301 -76177231 + L2 LINE L2 3173 3272 0 385 210 20 30 chr5 126909925 126910025 -76175507 - MIR SINE MIR -83 125 27 674 199 84 36 chr5 126913000 126913166 -76172366 - MLT1F1 LTR MaLR 0 567 394 342 269 69 69 chr5 126914786 126915046 -76170486 + MLT1I LTR MaLR 116 375 -34 1034 287 36 14 chr5 126915308 126915729 -76169803 + L1MCc LINE L1 24 453 -5970 366 260 16 49 chr5 126915949 126916072 -76169460 + L1MCc LINE L1 824 942 -5481 212 236 90 0 chr5 126918602 126918691 -76166841 + L2 LINE L2 2934 3030 -242 1685 137 42 11 chr5 126918950 126919213 -76166319 + AluSg SINE Alu 1 271 -39 412 198 27 54 chr5 126919640 126919751 -76165781 + MER103 DNA DNA 14 121 -45 200 203 27 81 chr5 126919955 126920029 -76165503 - L3 LINE CR1 -691 886 817 21 0 0 0 chr5 126921041 126921062 -76164470 + AT_rich Low_complexity Low_complexity 1 21 0 212 0 0 35 chr5 126921136 126921165 -76164367 + (GGAGAA)n Simple_repeat Simple_repeat 1 28 0 578 139 104 9 chr5 126921167 126921282 -76164250 - FLAM_A SINE Alu -11 131 6 994 215 15 2 chr5 126922293 126922538 -76162994 + L1MB7 LINE L1 5780 6010 -174 315 299 41 0 chr5 126922778 126922875 -76162657 - MIR SINE MIR -102 160 60 225 195 0 0 chr5 126923008 126923049 -76162483 + CT-rich Low_complexity Low_complexity 2 42 0 1166 220 66 3 chr5 126923058 126923362 -76162170 - L1MC2 LINE L1 -2 6342 6020 22 35 0 0 chr5 126923372 126923401 -76162131 + AT_rich Low_complexity Low_complexity 1 29 0 246 133 60 36 chr5 126925427 126925510 -76160022 + A-rich Low_complexity Low_complexity 5 89 0 3220 169 19 3 chr5 126926038 126926611 -76158921 - L1MB5 LINE L1 0 6174 5593 1215 83 0 0 chr5 126926615 126926771 -76158761 - AluY SINE Alu 0 311 156 243 0 0 0 chr5 126927083 126927110 -76158422 + (T)n Simple_repeat Simple_repeat 1 27 0 828 210 73 0 chr5 126927602 126927821 -76157711 - MIR SINE MIR -5 257 23 293 305 123 0 chr5 126927981 126928135 -76157397 + MER5B DNA MER1_type 1 173 -5 * 340 254 61 26 chr5 126928112 126928226 -76157306 + MIR SINE MIR 30 147 -115 612 264 13 0 chr5 126928373 126928528 -76157004 - MLT1B LTR MaLR -15 375 219 2162 102 23 20 chr5 126929037 126929340 -76156192 - AluSx SINE Alu -8 304 1 232 288 0 0 chr5 126929977 126930036 -76155496 - MER45 DNA AcHobo -924 116 58 534 349 72 25 chr5 126930541 126931218 -76154314 - L1M4 LINE L1 -2348 3798 3090 2011 136 3 7 chr5 126931713 126932021 -76153511 + AluSx SINE Alu 1 307 -5 2232 162 61 29 chr5 126932024 126932480 -76153052 + L1MA6 LINE L1 5827 6297 -3 1643 156 3 25 chr5 126932485 126932812 -76152720 + L1 LINE L1 4747 5066 -1080 195 114 0 0 chr5 126933071 126933106 -76152426 + (TG)n Simple_repeat Simple_repeat 2 36 0 814 313 67 26 chr5 126933143 126933561 -76151971 - MLT1L LTR MaLR -132 483 49 3794 133 18 42 chr5 126933878 126934613 -76150919 - Tigger1 DNA MER2_type -733 1685 969 13305 153 37 22 chr5 126935330 126937708 -76147824 - Tigger1 DNA MER2_type 0 2418 6 1973 212 15 12 chr5 126938219 126938629 -76146903 + LTR57 LTR ERVL 1 411 0 789 296 91 23 chr5 126938694 126939046 -76146486 + L2 LINE L2 2932 3307 -6 708 201 111 47 chr5 126939267 126939501 -76146031 + L1M4 LINE L1 38 286 -6256 454 270 49 43 chr5 126939622 126939807 -76145725 + MER110 LTR ERV1 286 471 -20 215 236 18 0 chr5 126939911 126939966 -76145566 + L2 LINE L2 3217 3272 0 232 333 0 0 chr5 126940712 126940762 -76144770 + GA-rich Low_complexity Low_complexity 2 54 -16 1793 172 0 29 chr5 126940762 126941076 -76144456 + AluJo SINE Alu 1 305 -7 232 333 0 0 chr5 126941076 126941094 -76144438 + GA-rich Low_complexity Low_complexity 53 70 0 35038 86 12 37 chr5 126942042 126946122 -76139410 + L1PA6 LINE L1 11 3952 -2202 462 41 0 41 chr5 126946122 126946192 -76139340 + L1PA4 LINE L1 6085 6154 -1 35038 86 12 37 chr5 126946192 126948337 -76137195 + L1PA6 LINE L1 3952 6149 -5 189 226 170 0 chr5 126948708 126948761 -76136771 - MER5B DNA MER1_type -111 67 6 474 343 114 22 chr5 126949744 126950149 -76135383 - L2 LINE L2 -1 3312 2871 568 211 33 7 chr5 126950195 126950347 -76135185 + L1MC4 LINE L1 7684 7839 -203 222 204 0 0 chr5 126950347 126950391 -76135141 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 8481 161 48 4 chr5 126950396 126952960 -76132572 - L1MA5A LINE L1 -19 7299 4638 7351 229 33 6 chr5 126952960 126954450 -76131082 - L1MA5A LINE L1 -4997 2171 642 1224 174 36 24 chr5 126954507 126954754 -76130778 + L1MD2 LINE L1 5742 5991 -368 264 170 0 0 chr5 126955472 126955525 -76130007 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 255 243 113 79 chr5 126955660 126955837 -76129695 - MIR SINE MIR -54 208 26 2069 125 57 26 chr5 126955837 126956189 -76129343 - THE1B LTR MaLR 0 364 2 1631 227 67 55 chr5 126956528 126957053 -76128479 - MER68 LTR ERV1 -31 531 1 382 298 69 58 chr5 126957834 126958069 -76127463 + HAL1b LINE L1 59 260 -1088 219 88 0 0 chr5 126958069 126958103 -76127429 + (CA)n Simple_repeat Simple_repeat 1 34 0 382 298 69 58 chr5 126958103 126958280 -76127252 + HAL1b LINE L1 260 433 -915 2414 229 24 11 chr5 126958468 126959101 -76126431 + L1M4 LINE L1 4420 5060 -1086 1148 236 36 0 chr5 126959115 126959340 -76126192 + L1PA13 LINE L1 1 233 -6554 6669 187 26 21 chr5 126959357 126960833 -76124699 + L1P LINE L1 2359 3841 -2305 2216 100 24 15 chr5 126960839 126961169 -76124363 + L1PA13 LINE L1 5639 5971 -192 331 108 0 31 chr5 126961169 126961234 -76124298 + L1PA15 LINE L1 6103 6165 0 549 276 12 35 chr5 126961234 126961475 -76124057 + L1M4 LINE L1 5050 5286 -860 577 119 0 0 chr5 126961575 126961659 -76123873 - AluS SINE Alu -227 85 2 280 125 0 0 chr5 126961660 126961700 -76123832 + MSTA LTR MaLR 389 428 0 876 229 40 40 chr5 126961998 126962225 -76123307 - MER96B DNA MER1_type? -190 227 1 238 275 25 25 chr5 126962359 126962479 -76123053 - MIR3 SINE MIR -50 158 39 871 187 0 0 chr5 126962957 126963107 -76122425 + FAM SINE Alu 16 165 -20 1907 194 84 41 chr5 126963148 126963611 -76121921 - MLT1D LTR MaLR 0 505 23 225 309 15 0 chr5 126963679 126963747 -76121785 - L1MC/D LINE L1 -2239 5569 5501 285 243 14 0 chr5 126964559 126964629 -76120903 - MLT1D LTR MaLR -317 73 3 1417 248 133 13 chr5 126966051 126966558 -76118974 + L1MCc LINE L1 994 1723 -4887 1166 124 0 59 chr5 126966558 126966744 -76118788 + AluSx SINE Alu 1 175 -137 342 277 130 69 chr5 126966745 126966976 -76118556 + L1MCc LINE L1 1566 1810 -5131 929 245 59 43 chr5 126967218 126967590 -76117942 + L1MCc LINE L1 2129 2506 -4616 1172 157 102 4 chr5 126967723 126967959 -76117573 + L1MC2 LINE L1 6086 6344 0 195 167 0 0 chr5 126968607 126968649 -76116883 + GA-rich Low_complexity Low_complexity 2 43 0 2405 92 0 3 chr5 126969099 126969404 -76116128 - AluSg SINE Alu -2 308 5 692 131 8 41 chr5 126969643 126969793 -76115739 - FLAM_C SINE Alu 0 146 1 386 264 0 36 chr5 126969794 126969904 -76115628 - MLT2E LTR ERVL -488 140 35 1208 204 160 10 chr5 126972435 126972828 -76112704 + MLT1C LTR MaLR 6 457 -10 394 308 51 28 chr5 126973066 126973280 -76112252 + MIR SINE MIR 13 231 -31 281 179 0 145 chr5 126974630 126974747 -76110785 - L1ME LINE L1 -345 5776 5677 37 62 0 0 chr5 126974773 126974838 -76110694 + AT_rich Low_complexity Low_complexity 1 65 0 23 0 0 0 chr5 126974878 126974901 -76110631 + AT_rich Low_complexity Low_complexity 1 23 0 363 212 182 50 chr5 126974901 126975203 -76110329 - L1ME4a LINE L1 -11 6110 5769 491 126 0 212 chr5 126975854 126976179 -76109353 - AluSg SINE Alu -3 307 52 260 256 31 8 chr5 126976865 126976921 -76108611 + MER58A DNA MER1_type 20 50 -165 2146 116 0 26 chr5 126976921 126977231 -76108301 - AluSg SINE Alu -8 302 1 260 256 31 8 chr5 126977231 126977260 -76108272 + MER58A DNA MER1_type 50 77 -138 2883 121 35 0 chr5 126977260 126977691 -76107841 - L1M1 LINE L1 -504 5801 5356 32 0 0 0 chr5 126978572 126978604 -76106928 + AT_rich Low_complexity Low_complexity 1 32 0 1369 236 91 2 chr5 126978672 126979092 -76106440 - Charlie4a DNA MER1_type -31 477 21 2033 121 14 0 chr5 126979521 126979802 -76105730 + AluSx SINE Alu 12 296 -16 405 189 0 0 chr5 126979812 126979886 -76105646 + L1MB8 LINE L1 6104 6177 -1 311 201 113 30 chr5 126979966 126980186 -76105346 + L1MD1 LINE L1 6089 7694 0 399 282 53 6 chr5 126980195 126980365 -76105167 + L1MC5 LINE L1 7703 7880 -81 739 127 0 17 chr5 126980421 126980539 -76104993 - FLAM_C SINE Alu -17 116 1 973 154 86 9 chr5 126981147 126981380 -76104152 + AluSx SINE Alu 58 308 -4 2133 216 41 48 chr5 126981381 126982293 -76103239 + L1ME1 LINE L1 4688 5593 -585 1183 197 18 13 chr5 126982293 126982521 -76103011 + AluJo SINE Alu 73 301 -11 2401 68 41 0 chr5 126982521 126982813 -76102719 + AluY SINE Alu 1 304 -7 960 259 72 28 chr5 126982818 126983181 -76102351 + L1ME1 LINE L1 5687 6065 -101 284 253 185 38 chr5 126984621 126984999 -76100533 + MLT1H1 LTR MaLR 110 555 0 2339 77 0 3 chr5 126985653 126985940 -76099592 + AluY SINE Alu 1 286 -25 42 71 0 0 chr5 126986290 126986374 -76099158 + AT_rich Low_complexity Low_complexity 1 84 0 37 97 0 0 chr5 126986435 126986549 -76098983 + AT_rich Low_complexity Low_complexity 1 114 0 783 188 122 53 chr5 126987469 126987639 -76097893 + MER33 DNA MER1_type 54 248 -2337 2344 71 0 0 chr5 126987639 126987944 -76097588 - AluSc SINE Alu 0 305 1 783 188 122 53 chr5 126987944 126988017 -76097515 + MER33 DNA MER1_type 248 315 -9 384 261 39 101 chr5 126988795 126989116 -76096416 + MLT1L LTR MaLR 208 420 -91 449 225 36 118 chr5 126989440 126989593 -76095939 - L1M4 LINE L1 -6241 301 180 2203 128 0 0 chr5 126989593 126989899 -76095633 - AluSq SINE Alu -7 306 1 449 225 36 118 chr5 126989899 126990025 -76095507 - L1M4 LINE L1 -6362 180 45 865 251 52 52 chr5 126990373 126990773 -76094759 - MLT1C LTR MaLR -24 443 45 900 267 43 49 chr5 126990987 126991335 -76094197 + MLT1H1 LTR MaLR 66 411 -144 1869 226 44 47 chr5 126991335 126991484 -76094048 - MER77 LTR ERV1 -8 597 449 1522 155 111 11 chr5 126991484 126991755 -76093777 + AluJb SINE Alu 2 299 -13 1869 226 44 47 chr5 126991755 126992177 -76093355 - MER77 LTR ERV1 -156 449 54 1931 224 31 35 chr5 126992949 126993497 -76092035 - MER99 DNA DNA -3 825 280 2508 43 0 3 chr5 126993735 126994036 -76091496 + L1PA6 LINE L1 5854 6153 -1 342 240 106 0 chr5 126994534 126994638 -76090894 - MER99 DNA DNA -702 126 12 434 111 20 30 chr5 126995402 126995501 -76090031 + (CTCA)n Simple_repeat Simple_repeat 2 99 0 308 164 0 55 chr5 126995552 126995680 -76089852 + (CTCA)n Simple_repeat Simple_repeat 2 122 0 283 213 21 53 chr5 126995795 126995889 -76089643 + (CTCA)n Simple_repeat Simple_repeat 1 91 0 557 252 41 0 chr5 126996097 126996244 -76089288 + MLT1A1 LTR MaLR 186 338 -27 496 244 42 0 chr5 126996368 126996487 -76089045 + LTR16C LTR ERVL 192 315 -176 466 227 21 0 chr5 126996489 126996586 -76088946 - MER45 DNA AcHobo -916 124 26 243 306 0 0 chr5 126996662 126996724 -76088808 + MLT1K LTR MaLR 522 583 -5 1584 181 135 0 chr5 126996919 126997268 -76088264 - MSTD LTR MaLR 0 396 1 249 47 0 47 chr5 126997844 126997887 -76087645 - Alu SINE Alu -22 278 238 769 246 89 0 chr5 126998403 126998594 -76086938 - MIR SINE MIR -8 254 47 1607 153 48 70 chr5 126999262 126999733 -76085799 - THE1B LTR MaLR 0 364 1 221 186 304 10 chr5 127000485 127000587 -76084945 + L2 LINE L2 3141 3272 0 357 282 82 9 chr5 127000951 127001061 -76084471 - MIR SINE MIR -91 171 54 240 250 12 36 chr5 127001237 127001321 -76084211 + (TG)n Simple_repeat Simple_repeat 1 82 0 933 83 0 30 chr5 127003239 127003371 -76082161 - AluY SINE Alu -182 129 2 1529 231 13 0 chr5 127003372 127003753 -76081779 - L1M4 LINE L1 -1454 4692 4307 377 310 76 0 chr5 127003765 127003936 -76081596 + MLT1J2 LTR MaLR 267 450 0 259 353 43 72 chr5 127003958 127004193 -76081339 + L2 LINE L2 3044 3271 -1 425 328 32 65 chr5 127004234 127004481 -76081051 - MIR SINE MIR -18 244 6 556 206 0 19 chr5 127004715 127004822 -76080710 - MIR SINE MIR -69 139 35 2149 126 7 0 chr5 127005758 127006060 -76079472 - AluJo SINE Alu -8 304 1 717 189 0 0 chr5 127006283 127006442 -76079090 + (CA)n Simple_repeat Simple_repeat 2 160 0 1191 119 0 93 chr5 127010809 127011077 -76074455 + AluSx SINE Alu 1 243 -69 214 248 92 113 chr5 127011670 127011811 -76073721 - MIR SINE MIR -54 208 71 1526 206 50 11 chr5 127011937 127012297 -76073235 - MLT1B LTR MaLR -13 377 4 2332 85 23 16 chr5 127012330 127012637 -76072895 - AluY SINE Alu -1 310 2 784 229 30 0 chr5 127013173 127013374 -76072158 - MER58A DNA MER1_type -14 210 4 271 281 8 32 chr5 127014820 127014946 -76070586 - MIR SINE MIR -51 211 88 255 267 75 75 chr5 127015722 127015868 -76069664 - MER5A DNA MER1_type -6 183 38 223 294 54 43 chr5 127016654 127016746 -76068786 + MIR SINE MIR 48 140 -122 332 225 128 120 chr5 127017311 127017539 -76067993 + MLT1J LTR MaLR 113 347 -164 930 228 128 102 chr5 127017539 127018149 -76067383 + MLT1E2 LTR MaLR 1 626 0 332 225 128 120 chr5 127018149 127018294 -76067238 + MLT1J LTR MaLR 347 489 -22 305 252 139 43 chr5 127019356 127019471 -76066061 + MIR SINE MIR 28 153 -109 236 288 0 0 chr5 127019810 127019876 -76065656 + MLT1J LTR MaLR 109 174 -337 208 200 25 0 chr5 127020406 127020446 -76065086 + MIR SINE MIR 109 149 -113 376 294 138 31 chr5 127020536 127020863 -76064669 + L2 LINE L2 2908 3269 -3 255 316 26 8 chr5 127021431 127021548 -76063984 - MIR SINE MIR -79 183 65 316 275 142 37 chr5 127021628 127021829 -76063703 - MIR SINE MIR -14 248 17 612 227 26 67 chr5 127021915 127022109 -76063423 + MIR SINE MIR 17 202 -60 207 0 0 0 chr5 127023205 127023228 -76062304 + (CA)n Simple_repeat Simple_repeat 2 24 0 28 48 0 0 chr5 127024434 127024476 -76061056 + AT_rich Low_complexity Low_complexity 1 42 0 216 260 53 113 chr5 127025372 127025522 -76060010 + MIR SINE MIR 32 172 -90 307 296 97 18 chr5 127025634 127025860 -76059672 - LTR16C LTR ERVL -16 475 232 572 280 39 19 chr5 127027277 127027484 -76058048 + MLT1K LTR MaLR 375 585 -3 2021 130 7 27 chr5 127028541 127028842 -76056690 - AluSx SINE Alu -17 295 1 549 261 89 39 chr5 127028904 127029107 -76056425 + MIR SINE MIR 50 262 0 1014 263 75 77 chr5 127029978 127030714 -76054818 - L1MC5 LINE L1 -725 7236 6475 723 215 0 13 chr5 127030983 127031132 -76054400 - Tigger3(Golem) DNA MER2_type -13 3016 2870 2611 149 61 10 chr5 127031249 127031760 -76053772 - Tigger3(Golem) DNA MER2_type -98 2931 2395 676 200 113 27 chr5 127031757 127031907 -76053625 - Tigger3(Golem) DNA MER2_type -2866 163 1 * 312 271 102 54 chr5 127032046 127032142 -76053390 - L1MDa LINE L1 -4434 2106 1997 1962 161 10 7 chr5 127032142 127032452 -76053080 - AluJb SINE Alu -1 311 1 312 271 102 54 chr5 127032452 127032521 -76053011 - L1MDa LINE L1 -4543 1997 1933 187 250 59 0 chr5 127033525 127033593 -76051939 - MER5A DNA MER1_type -96 93 22 2460 206 82 8 chr5 127034170 127034781 -76050751 + L1MB5 LINE L1 5506 6161 -13 2491 64 7 0 chr5 127034789 127035086 -76050446 - AluSg SINE Alu -11 299 1 573 284 60 28 chr5 127035224 127035442 -76050090 - MIR SINE MIR -4 258 34 445 327 18 12 chr5 127035718 127035883 -76049649 - MIR SINE MIR -77 185 20 295 286 54 18 chr5 127035951 127036063 -76049469 - MIR SINE MIR -127 135 20 207 182 23 0 chr5 127036542 127036586 -76048946 + L2 LINE L2 3269 3313 0 453 227 9 9 chr5 127036666 127036776 -76048756 - MER94 DNA DNA -19 115 6 299 275 0 0 chr5 127036781 127036861 -76048671 - L1ME LINE L1 -500 5621 5542 353 296 78 35 chr5 127037131 127037273 -76048259 + MIR SINE MIR 41 188 -74 1306 168 46 112 chr5 127037915 127038219 -76047313 + AluJo SINE Alu 1 284 -28 292 170 27 18 chr5 127038230 127038311 -76047221 - MER4D LTR ERV1 -12 891 674 3305 159 65 12 chr5 127038431 127039074 -76046458 - MER4D LTR ERV1 -136 767 91 1724 138 0 4 chr5 127039078 127039332 -76046200 - AluSx SINE Alu -2 310 58 3771 122 4 12 chr5 127039332 127039891 -76045641 + MER41A LTR ERV1 1 554 0 432 150 0 0 chr5 127039891 127039951 -76045581 - AluSx SINE Alu -249 61 2 390 174 0 23 chr5 127039953 127040039 -76045493 - MER49 LTR ERV1 -829 94 11 283 100 0 0 chr5 127040381 127040421 -76045111 - L1MC1 LINE L1 -31 6302 6263 8061 133 6 7 chr5 127042371 127043645 -76041887 - HSMAR2 DNA Mariner -1 1301 30 256 322 85 17 chr5 127043667 127043785 -76041747 + L2 LINE L2 1313 1438 -1876 203 172 52 0 chr5 127044140 127044198 -76041334 + (TA)n Simple_repeat Simple_repeat 1 61 0 580 261 99 19 chr5 127044282 127044493 -76041039 - L2 LINE L2 0 3313 3086 476 0 0 33 chr5 127044710 127044771 -76040761 + (TTTTC)n Simple_repeat Simple_repeat 5 63 0 2188 122 10 6 chr5 127044774 127045086 -76040446 - AluSq SINE Alu 0 313 1 1903 120 4 18 chr5 127045207 127045481 -76040051 - AluSq SINE Alu -39 274 5 761 107 0 50 chr5 127045616 127045756 -76039776 + L1MD1 LINE L1 6091 6223 -19 559 260 117 8 chr5 127046583 127046848 -76038684 - MER113 DNA MER1_type? -147 374 81 1687 261 89 9 chr5 127046848 127047500 -76038032 + L1MC4 LINE L1 7196 7899 -143 261 0 0 0 chr5 127047506 127047535 -76037997 + (TG)n Simple_repeat Simple_repeat 2 30 0 190 0 67 0 chr5 127047535 127047565 -76037967 + (GA)n Simple_repeat Simple_repeat 2 33 0 3628 88 51 0 chr5 127047580 127048094 -76037438 + MER41A LTR ERV1 15 554 0 1208 246 114 16 chr5 127048462 127048893 -76036639 - LTR33 LTR ERVL -48 473 1 368 301 32 16 chr5 127048899 127049022 -76036510 + MIR SINE MIR 60 184 -78 217 297 44 33 chr5 127049236 127049327 -76036205 + MIR SINE MIR 148 239 -23 807 241 117 22 chr5 127049363 127049799 -76035733 + MLT1H LTR MaLR 58 549 0 364 260 42 0 chr5 127049931 127050027 -76035505 - MIR SINE MIR -55 207 108 3095 169 18 70 chr5 127050211 127050938 -76034594 - LTR8 LTR ERV1 0 691 3 4184 78 11 0 chr5 127050938 127051486 -76034046 - MER41A LTR ERV1 0 554 1 324 316 40 36 chr5 127051733 127051958 -76033574 - MLT1K LTR MaLR -356 232 7 265 295 16 0 chr5 127052117 127052218 -76033314 + MIR SINE MIR 53 154 -62 2691 148 47 33 chr5 127052565 127053146 -76032386 + LTR49 LTR ERV1 1 589 -6 2103 133 3 0 chr5 127053229 127053530 -76032002 + AluSx SINE Alu 1 302 -10 327 107 13 93 chr5 127053563 127053638 -76031894 - MER4B LTR ERV1 -540 70 2 376 250 56 0 chr5 127053641 127053749 -76031783 - MIR SINE MIR -36 226 113 2997 113 74 46 chr5 127053758 127053876 -76031656 - MER41A LTR ERV1 0 554 441 2386 75 0 10 chr5 127053876 127054182 -76031350 + AluSc SINE Alu 1 303 -6 2997 113 74 46 chr5 127054182 127054602 -76030930 - MER41A LTR ERV1 -113 441 1 470 231 23 29 chr5 127055433 127055606 -76029926 + L1M4 LINE L1 5075 5246 -900 290 113 0 19 chr5 127056069 127056122 -76029410 + (TG)n Simple_repeat Simple_repeat 1 52 0 278 247 10 31 chr5 127056123 127056220 -76029312 + (TATATG)n Simple_repeat Simple_repeat 6 100 0 242 255 0 21 chr5 127056226 127056320 -76029212 + L1MC4 LINE L1 6614 6705 -1337 188 200 17 0 chr5 127056666 127056726 -76028806 + (TG)n Simple_repeat Simple_repeat 1 61 0 2281 102 0 0 chr5 127056774 127057068 -76028464 - AluSg SINE Alu -16 294 1 316 232 0 24 chr5 127057545 127057627 -76027905 + MER116 DNA Mariner 1 80 0 2271 118 0 0 chr5 127057987 127058293 -76027239 - AluSx SINE Alu -6 306 1 480 296 58 41 chr5 127058834 127059178 -76026354 + LTR16C LTR ERVL 142 491 0 577 311 82 18 chr5 127059205 127059424 -76026108 + MIR SINE MIR 20 252 -10 2208 99 14 0 chr5 127059497 127059790 -76025742 - AluSg SINE Alu -13 297 1 233 272 38 44 chr5 127060092 127060250 -76025282 + MIR3 SINE MIR 42 198 -10 985 101 13 25 chr5 127060754 127060986 -76024546 + (TA)n Simple_repeat Simple_repeat 1 229 0 4302 109 15 5 chr5 127060993 127061664 -76023868 + L1PA13 LINE L1 5483 6160 -3 2276 164 14 7 chr5 127061672 127062086 -76023446 + L1MC1 LINE L1 5917 6333 0 1249 223 21 69 chr5 127062307 127062866 -76022666 + L1MC5 LINE L1 6527 6996 -812 1332 213 50 9 chr5 127063164 127063484 -76022048 - MER58B DNA MER1_type -4 337 5 725 214 40 69 chr5 127063803 127064078 -76021454 - MLT1D LTR MaLR -238 267 1 424 314 200 27 chr5 127064251 127064758 -76020774 + L2 LINE L2 2723 3313 0 266 364 17 0 chr5 127065534 127065652 -76019880 + MIR3 SINE MIR 67 186 -22 23 0 0 0 chr5 127067014 127067037 -76018495 + AT_rich Low_complexity Low_complexity 1 23 0 449 338 59 17 chr5 127070094 127070331 -76015201 + MIR SINE MIR 2 248 -14 4732 167 57 15 chr5 127070961 127072311 -76013221 + L1MA6 LINE L1 4885 6300 0 255 31 0 0 chr5 127073281 127073313 -76012219 + (CAA)n Simple_repeat Simple_repeat 2 33 0 218 393 42 75 chr5 127075316 127075514 -76010018 + L2 LINE L2 2806 3009 -263 2601 95 28 3 chr5 127075514 127075903 -76009629 - L1MA1 LINE L1 0 6302 5904 218 393 42 75 chr5 127075903 127076159 -76009373 + L2 LINE L2 3009 3245 -27 606 246 53 21 chr5 127078180 127078367 -76007165 - MIR SINE MIR -38 224 32 293 261 48 42 chr5 127078593 127078643 -76006889 + L1ME LINE L1 5564 5612 -509 1773 171 137 13 chr5 127078643 127079024 -76006508 - MSTA LTR MaLR 0 428 1 293 261 48 42 chr5 127079024 127079138 -76006394 + L1ME LINE L1 5612 5729 -392 245 257 29 29 chr5 127079614 127079719 -76005813 + L1M4 LINE L1 4523 4627 -1519 1149 274 88 35 chr5 127079901 127081216 -76004316 + L1MEc LINE L1 2182 3607 -2608 1708 232 50 9 chr5 127081246 127081690 -76003842 + MLT1C LTR MaLR 6 467 0 2297 137 34 63 chr5 127081691 127082135 -76003397 - Tigger2a DNA MER2_type -3 431 1 364 278 191 56 chr5 127082178 127082869 -76002663 + L1MEc LINE L1 3675 4458 -1757 2144 35 0 8 chr5 127082885 127083172 -76002360 - L1PA3 LINE L1 0 6155 5896 5395 29 0 12 chr5 127083172 127084418 -76001114 + L1PA3 LINE L1 4660 5895 -260 1290 254 73 69 chr5 127084603 127085123 -76000409 + MER68 LTR ERV1 41 562 0 8028 86 5 7 chr5 127085604 127086678 -75998854 + MER11C LTR ERVK 1 1071 0 1505 245 18 23 chr5 127086914 127087350 -75998182 - MLT1C LTR MaLR 0 467 34 608 292 53 9 chr5 127087419 127087841 -75997691 + L1MCc LINE L1 1265 1879 -4889 1959 67 28 0 chr5 127088247 127088531 -75997001 + MER11B LTR ERVK 941 1232 -4 1322 248 35 21 chr5 127088764 127089192 -75996340 - MLT1C LTR MaLR 0 467 34 655 254 108 39 chr5 127089261 127089696 -75995836 + L1MCc LINE L1 1265 1898 -4889 350 337 48 12 chr5 127089699 127089865 -75995667 + L1MCc LINE L1 2390 2561 -4561 324 288 81 10 chr5 127089927 127090125 -75995407 + L1MCc LINE L1 2563 2774 -4348 470 158 96 27 chr5 127090148 127090294 -75995238 + MER33 DNA MER1_type 9 164 -160 27 29 0 0 chr5 127090301 127090335 -75995197 + AT_rich Low_complexity Low_complexity 1 34 0 373 182 61 67 chr5 127090338 127090503 -75995029 + MER33 DNA MER1_type 159 322 -2 5535 251 10 9 chr5 127090552 127092182 -75993350 + L1P LINE L1 2529 4160 -1986 358 264 108 27 chr5 127092189 127092337 -75993195 - MER96 DNA MER1_type? -15 160 1 852 276 70 17 chr5 127092338 127092696 -75992836 + L1ME3A LINE L1 5699 6075 -95 263 292 143 31 chr5 127093906 127094067 -75991465 + MIR SINE MIR 12 190 -72 1358 165 7 7 chr5 127094707 127094980 -75990552 - L1MA4 LINE L1 -1 6299 6027 2347 96 0 3 chr5 127095397 127095710 -75989822 - AluSq SINE Alu -1 312 1 246 191 0 0 chr5 127096883 127096925 -75988607 - MER103 DNA DNA -45 121 80 280 281 119 9 chr5 127097600 127097770 -75987762 - MLT1H LTR MaLR -6 543 364 370 309 17 22 chr5 127097843 127098021 -75987511 - MLT1H LTR MaLR -252 297 121 650 308 56 40 chr5 127099313 127099563 -75985969 - MIR SINE MIR -3 259 6 380 261 62 39 chr5 127100736 127100866 -75984666 + MER20B DNA MER1_type 44 176 -607 402 292 15 22 chr5 127101291 127101428 -75984104 - L2 LINE L2 -16 3297 3162 182 289 24 36 chr5 127102692 127102775 -75982757 - L2 LINE L2 -59 3254 3173 2473 60 0 13 chr5 127102789 127103088 -75982444 - AluY SINE Alu -15 296 2 2554 55 6 3 chr5 127103436 127103779 -75981753 - L1P3 LINE L1 -375 5779 5436 1326 79 14 70 chr5 127103779 127103993 -75981539 + L1PA7 LINE L1 5947 6148 -6 345 323 61 80 chr5 127105243 127105506 -75980026 - L2 LINE L2 -19 3253 2996 1031 221 78 29 chr5 127105520 127105786 -75979746 + MER5C DNA MER1_type 2 286 -38 2173 118 0 3 chr5 127105786 127106082 -75979450 - AluSx SINE Alu -17 295 1 1031 221 78 29 chr5 127106082 127106123 -75979409 + MER5C DNA MER1_type 286 324 0 293 324 128 26 chr5 127106306 127106874 -75978658 - L2 LINE L2 -1154 2160 1535 2198 97 7 0 chr5 127107773 127108063 -75977469 + AluSc SINE Alu 1 292 -17 423 250 140 75 chr5 127108080 127108196 -75977336 + Charlie8 DNA MER1_type 1 108 -233 2352 97 3 0 chr5 127108196 127108494 -75977038 + AluSp SINE Alu 3 301 -12 423 250 140 75 chr5 127108494 127108605 -75976927 + Charlie8 DNA MER1_type 108 243 -98 665 115 0 0 chr5 127108864 127108960 -75976572 - AluSg/x SINE Alu -6 304 209 31 58 0 0 chr5 127109015 127109067 -75976465 + AT_rich Low_complexity Low_complexity 1 52 0 813 298 122 25 chr5 127109535 127110145 -75975387 + L2 LINE L2 2583 3253 -60 22 35 0 0 chr5 127113257 127113286 -75972246 + AT_rich Low_complexity Low_complexity 1 29 0 213 330 128 98 chr5 127113404 127113762 -75971770 + L2 LINE L2 2896 3264 -8 1668 186 99 10 chr5 127114612 127115027 -75970505 - L1M4 LINE L1 -1016 5130 4679 * 40125 42 21 1 chr5 127115025 127121054 -75964478 + L1PA3 LINE L1 1 6154 -1 1815 201 39 37 chr5 127121064 127121636 -75963896 - L1M4 LINE L1 -1455 4691 4119 228 328 0 16 chr5 127121831 127121895 -75963637 + MIR3 SINE MIR 110 172 -36 1473 158 27 13 chr5 127122732 127123144 -75962388 + L1M4 LINE L1 5042 5464 -710 21 0 0 0 chr5 127124235 127124256 -75961276 + AT_rich Low_complexity Low_complexity 1 21 0 317 277 113 14 chr5 127124619 127124865 -75960667 + L1M4 LINE L1 5161 5431 -743 845 245 79 96 chr5 127124931 127125564 -75959968 - MLT1G LTR MaLR -2 588 14 6379 68 5 9 chr5 127125663 127126524 -75959008 + L1PA7 LINE L1 5298 6154 0 22 35 0 0 chr5 127126983 127127012 -75958520 + AT_rich Low_complexity Low_complexity 1 29 0 438 277 62 8 chr5 127128061 127128191 -75957341 - MIR3 SINE MIR -4 204 68 907 194 11 26 chr5 127128314 127128505 -75957027 + MER5A DNA MER1_type 2 189 0 549 217 191 13 chr5 127128627 127128779 -75956753 - MER5A DNA MER1_type -7 182 4 2044 139 0 3 chr5 127130148 127130442 -75955090 - AluSg SINE Alu -17 293 1 25 31 0 0 chr5 127130970 127131002 -75954530 + AT_rich Low_complexity Low_complexity 1 32 0 2171 136 0 0 chr5 127131263 127131573 -75953959 + AluSx SINE Alu 1 310 -2 250 333 25 0 chr5 127132187 127132268 -75953264 - L2 LINE L2 0 3272 3190 263 331 44 76 chr5 127132274 127132525 -75953007 + MLT1K LTR MaLR 7 249 -339 235 237 140 11 chr5 127132720 127132813 -75952719 + MLT1K LTR MaLR 479 583 -5 13007 139 42 5 chr5 127132918 127135204 -75950328 - Tigger1 DNA MER2_type 0 2418 48 290 278 6 58 chr5 127135523 127135696 -75949836 + L1MC5 LINE L1 7022 7185 -776 301 309 49 12 chr5 127135745 127135907 -75949625 + L1MC4 LINE L1 7328 7495 -547 * 333 282 72 57 chr5 127135891 127136153 -75949379 + L1MC5 LINE L1 7311 7576 -385 300 335 54 9 chr5 127136233 127136454 -75949078 + L1MC5 LINE L1 7665 7895 -66 2467 81 3 0 chr5 127136455 127136765 -75948767 - AluY SINE Alu 0 311 1 2170 254 68 21 chr5 127138327 127139227 -75946305 + L1ME LINE L1 3543 4484 -1662 352 268 38 19 chr5 127139277 127139434 -75946098 + L1ME LINE L1 4952 5111 -1035 2031 181 93 32 chr5 127139435 127140003 -75945529 + pTR5 LTR ERV1 742 1344 -1094 4520 106 28 139 chr5 127140019 127140944 -75944588 + LTR12 LTR ERV1 5 826 0 592 256 49 5 chr5 127140953 127141156 -75944376 + L1ME LINE L1 5119 5330 -816 1004 233 12 4 chr5 127141163 127141408 -75944124 + L1ME LINE L1 5390 5636 -530 1765 184 3 16 chr5 127141746 127142050 -75943482 - AluJb SINE Alu -12 300 1 729 261 43 28 chr5 127142419 127142630 -75942902 + MIR SINE MIR 1 214 -48 2259 98 38 49 chr5 127143763 127144131 -75941401 - THE1B LTR MaLR 0 364 1 248 260 55 0 chr5 127144230 127144303 -75941229 + MER1A DNA MER1_type 1 77 -450 * 2067 86 21 0 chr5 127144299 127144590 -75940942 + MER1A DNA MER1_type 233 529 0 182 271 181 19 chr5 127145057 127145212 -75940320 - MIR SINE MIR -50 212 33 25 51 0 0 chr5 127145878 127145917 -75939615 + AT_rich Low_complexity Low_complexity 1 39 0 582 305 27 11 chr5 127146284 127146471 -75939061 + MIR3 SINE MIR 6 195 -13 5903 138 139 94 chr5 127147384 127149013 -75936519 - pTR5 LTR ERV1 0 2438 738 2553 60 0 0 chr5 127149147 127149448 -75936084 + AluY SINE Alu 1 301 -10 2085 257 63 22 chr5 127152288 127153150 -75932382 + L1ME1 LINE L1 5194 6089 -77 527 304 28 6 chr5 127153524 127153705 -75931827 - Charlie8 DNA MER1_type -2152 265 81 280 133 0 0 chr5 127154614 127154659 -75930873 + MADE1 DNA Mariner 1 45 -35 312 284 86 30 chr5 127154794 127154991 -75930541 - MIR SINE MIR -54 208 1 211 376 65 44 chr5 127155889 127156301 -75929231 + L2 LINE L2 2066 2486 -828 386 201 12 0 chr5 127157517 127157616 -75927916 - L1MC4 LINE L1 0 8041 7898 2654 86 14 0 chr5 127157616 127157966 -75927566 - THE1A LTR MaLR 0 355 1 568 303 123 27 chr5 127157977 127159063 -75926469 - L1 LINE L1 -2060 4086 2896 1955 136 3 32 chr5 127159121 127159429 -75926103 - AluJb SINE Alu -13 299 1 24 0 0 0 chr5 127159433 127159457 -75926075 + AT_rich Low_complexity Low_complexity 1 24 0 407 280 97 41 chr5 127159714 127159998 -75925534 - L1 LINE L1 -3631 2515 2220 1601 193 0 20 chr5 127160139 127160434 -75925098 - AluJo SINE Alu -23 289 1 616 316 76 56 chr5 127160733 127161417 -75924115 - HAL1b LINE L1 -579 1713 100 2286 73 0 10 chr5 127161820 127162120 -75923412 + AluY SINE Alu 1 297 -14 372 22 0 0 chr5 127162168 127162213 -75923319 + (TG)n Simple_repeat Simple_repeat 2 46 0 1930 94 9 97 chr5 127162675 127163004 -75922528 - AluSq SINE Alu -13 300 1 186 43 0 0 chr5 127164290 127164313 -75921219 + (TA)n Simple_repeat Simple_repeat 1 23 0 4109 38 16 0 chr5 127164337 127164839 -75920693 - L1PA3 LINE L1 -3 6152 5643 361 317 140 23 chr5 127164876 127165226 -75920306 - L1M4 LINE L1 -2685 3461 3071 421 309 164 13 chr5 127166332 127166723 -75918809 - HAL1 LINE L1 -860 1647 1198 2860 91 68 7 chr5 127166806 127167248 -75918284 + LTR19A LTR ERV1 18 486 0 1106 117 56 0 chr5 127167248 127167410 -75918122 + LTR19A-int LTR ERV1 1 171 -5415 * 16414 56 46 40 chr5 127167405 127169796 -75915736 + LTR19A-int LTR ERV1 1975 4381 -1205 3541 79 0 13 chr5 127169791 127170258 -75915274 + LTR19A-int LTR ERV1 5126 5586 0 * 3167 100 47 0 chr5 127170258 127170709 -75914823 + LTR19A LTR ERV1 1 472 -14 23 0 0 0 chr5 127171248 127171271 -75914261 + AT_rich Low_complexity Low_complexity 1 23 0 372 279 49 88 chr5 127173124 127173328 -75912204 + MIR SINE MIR 7 202 -60 264 343 50 29 chr5 127174714 127174854 -75910678 - L2 LINE L2 -188 3084 2942 397 340 122 37 chr5 127175081 127175811 -75909721 - L2 LINE L2 -659 2655 1864 272 211 0 66 chr5 127176325 127176401 -75909131 + MER5B DNA MER1_type 107 177 -1 237 310 138 40 chr5 127177193 127177367 -75908165 + L2 LINE L2 2779 2969 -345 331 317 162 10 chr5 127178127 127178430 -75907102 + L1M4 LINE L1 3331 3679 -2467 294 292 46 32 chr5 127178432 127178656 -75906876 + L1M4 LINE L1 3689 3926 -2220 5817 105 28 7 chr5 127178769 127180225 -75905307 - L1PA13 LINE L1 0 6163 4675 474 363 74 5 chr5 127180385 127180806 -75904726 + L1M4 LINE L1 4116 4565 -1581 2046 105 52 0 chr5 127181708 127181994 -75903538 + AluSq SINE Alu 1 301 -12 353 272 181 11 chr5 127182306 127182582 -75902950 - L1ME4a LINE L1 -58 6063 5741 618 237 21 42 chr5 127183026 127183216 -75902316 - MER5A DNA MER1_type -3 186 1 449 203 16 94 chr5 127183245 127183373 -75902159 - L2 LINE L2 -36 3277 3160 568 249 129 5 chr5 127184236 127184453 -75901079 + MER112 DNA MER1_type 4 247 -13 182 319 89 57 chr5 127184562 127184719 -75900813 - L3b LINE CR1 -135 1448 1287 847 219 30 10 chr5 127184739 127184940 -75900592 + MER3 DNA MER1_type 5 209 0 2003 269 79 28 chr5 127186735 127187683 -75897849 + L2 LINE L2 2309 3304 -9 2260 176 29 0 chr5 127188097 127188513 -75897019 + MSTA LTR MaLR 1 428 0 9477 152 24 17 chr5 127188535 127189400 -75896132 + MSTA-int LTR MaLR 7 890 -761 2656 55 0 0 chr5 127189400 127189708 -75895824 - AluY SINE Alu -3 308 1 9477 152 24 17 chr5 127189708 127190471 -75895061 + MSTA-int LTR MaLR 890 1646 -5 2478 136 57 0 chr5 127190476 127190881 -75894651 + MSTA LTR MaLR 1 428 0 399 273 112 0 chr5 127190883 127191044 -75894488 + MIR SINE MIR 71 249 -13 642 201 40 0 chr5 127191437 127191586 -75893946 + MIR SINE MIR 79 233 -29 238 309 79 14 chr5 127191687 127191826 -75893706 + L2 LINE L2 3166 3313 0 259 334 96 35 chr5 127192698 127192841 -75892691 - MIR SINE MIR -63 145 4 1428 197 5 105 chr5 127193036 127193437 -75892095 + MLT1A1 LTR MaLR 5 365 0 615 258 93 26 chr5 127194322 127194516 -75891016 - MIR SINE MIR -43 219 13 417 269 62 31 chr5 127195503 127195642 -75889890 + MLT1L LTR MaLR 1 144 -471 264 290 16 0 chr5 127195642 127195704 -75889828 + MER58 DNA MER1_type 1 63 -161 751 141 33 0 chr5 127195817 127195938 -75889594 + MER6 DNA MER2_type 741 865 0 854 242 202 28 chr5 127195989 127196345 -75889187 + MLT1L LTR MaLR 146 563 -52 260 229 0 0 chr5 127196351 127196412 -75889120 - L1P LINE L1 -3700 2446 2386 3760 229 99 68 chr5 127196456 127198328 -75887204 - L1MEc LINE L1 -3887 2509 580 377 332 22 45 chr5 127198444 127198667 -75886865 + L2 LINE L2 2158 2375 -939 335 263 106 37 chr5 127199188 127199405 -75886127 + L1ME LINE L1 5549 5780 -341 294 271 121 22 chr5 127199380 127199688 -75885844 + HAL1b LINE L1 1201 6117 -4 * 1806 229 39 16 chr5 127201065 127201501 -75884031 - MLT1F LTR MaLR -95 447 2 780 268 24 10 chr5 127201622 127201831 -75883701 + MLT1G1 LTR MaLR 7 218 -377 319 326 15 30 chr5 127201872 127202004 -75883528 + MER5A DNA MER1_type 54 183 -6 1443 180 161 3 chr5 127202610 127202932 -75882600 - THE1C LTR MaLR -2 373 1 520 280 65 30 chr5 127203241 127203619 -75881913 + MER115 DNA AcHobo 2 433 -260 610 248 0 8 chr5 127204213 127204338 -75881194 + L2 LINE L2 3189 3312 -1 24607 141 15 10 chr5 127204841 127209935 -75875597 - L1PA8A LINE L1 -28 6418 1216 186 118 0 0 chr5 127209935 127209969 -75875563 + (TTG)n Simple_repeat Simple_repeat 1 34 0 24607 141 15 10 chr5 127209969 127211190 -75874342 - L1PA8A LINE L1 -5230 1216 3 7695 138 17 17 chr5 127212902 127214028 -75871504 - L1MA2 LINE L1 0 6304 5181 180 0 0 0 chr5 127214028 127214048 -75871484 + (TG)n Simple_repeat Simple_repeat 1 20 0 7695 138 17 17 chr5 127214048 127215478 -75870054 - L1MA2 LINE L1 -1123 5181 3734 552 294 33 0 chr5 127216310 127216463 -75869069 - MIR SINE MIR -45 217 60 1790 163 71 31 chr5 127216714 127217064 -75868468 - THE1B LTR MaLR 0 364 1 246 331 161 0 chr5 127217799 127217923 -75867609 + MIR3 SINE MIR 41 184 -24 4402 149 28 59 chr5 127219175 127220126 -75865406 - L1MA9 LINE L1 0 6312 5391 1009 181 20 55 chr5 127220130 127220384 -75865148 - L1MA9 LINE L1 -1915 4231 3987 * 4679 229 10 4 chr5 127220380 127221434 -75864098 - MSTB1-int LTR MaLR -589 1062 2 2447 147 31 5 chr5 127221435 127221856 -75863676 - MSTB1 LTR MaLR 0 432 1 270 115 0 0 chr5 127222333 127222385 -75863147 + (TA)n Simple_repeat Simple_repeat 1 52 0 204 141 59 12 chr5 127222438 127222523 -75863009 + (TA)n Simple_repeat Simple_repeat 1 89 0 2312 112 0 0 chr5 127223892 127224205 -75861327 - AluSp SINE Alu 0 313 1 366 263 30 10 chr5 127225770 127225869 -75859663 - MIR SINE MIR -71 137 37 270 0 0 0 chr5 127226036 127226066 -75859466 + (CA)n Simple_repeat Simple_repeat 2 31 0 204 328 0 15 chr5 127227465 127227532 -75858000 - MIR SINE MIR -127 81 16 268 218 93 132 chr5 127227860 127228049 -75857483 + MIR SINE MIR 15 187 -75 556 263 76 54 chr5 127228054 127228278 -75857254 + MIR SINE MIR 19 247 -15 493 293 85 11 chr5 127228920 127229471 -75856061 - MER115 DNA AcHobo -1 692 14 223 197 16 82 chr5 127230201 127230262 -75855270 + MIR3 SINE MIR 103 159 -49 506 184 0 10 chr5 127230263 127230361 -75855171 - Charlie1 DNA MER1_type 0 2761 2665 2787 208 65 8 chr5 127230368 127230999 -75854533 - Charlie1a DNA MER1_type -788 667 1 419 280 83 24 chr5 127231701 127231869 -75853663 - MER5B DNA MER1_type 0 178 1 1172 211 95 7 chr5 127231982 127232276 -75853256 - MLT1J2 LTR MaLR -130 320 1 519 202 114 28 chr5 127232344 127232675 -75852857 + L1MC5 LINE L1 7476 7914 -47 787 296 75 8 chr5 127234710 127234950 -75850582 + MIR SINE MIR 7 262 0 525 317 59 44 chr5 127235260 127235531 -75850001 + L2 LINE L2 2446 2720 -594 223 171 0 0 chr5 127235954 127235995 -75849537 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 293 80 0 20 chr5 127236660 127236710 -75848822 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 235 267 86 27 chr5 127236786 127236973 -75848559 + L1ME LINE L1 5333 5530 -712 332 254 15 42 chr5 127236974 127237107 -75848425 + L1ME LINE L1 5569 5695 -426 514 264 70 0 chr5 127238796 127238925 -75846607 + MER5A DNA MER1_type 18 155 -34 259 379 33 20 chr5 127239335 127239488 -75846044 + MIR3 SINE MIR 45 199 -9 255 307 55 61 chr5 127239581 127239744 -75845788 + MIR SINE MIR 37 198 -64 6962 58 3 53 chr5 127240333 127241782 -75843750 - L1PA4 LINE L1 0 6155 4741 5251 191 109 4 chr5 127241886 127243238 -75842294 + L1P LINE L1 2298 3790 -2356 11163 67 7 0 chr5 127243423 127244966 -75840566 + L1P LINE L1 3070 4623 -1523 5644 203 11 7 chr5 127245066 127246376 -75839156 + L1P LINE L1 3668 4983 -1163 1556 135 35 21 chr5 127246477 127246766 -75838766 + L1PA13 LINE L1 5868 6160 -3 639 75 11 0 chr5 127246817 127246910 -75838622 + L1MA1 LINE L1 6205 6298 -4 38 39 0 0 chr5 127246910 127246962 -75838570 + AT_rich Low_complexity Low_complexity 1 52 0 186 43 0 0 chr5 127247259 127247282 -75838250 + (TC)n Simple_repeat Simple_repeat 2 24 0 596 108 135 0 chr5 127247632 127247743 -75837789 + L1M2 LINE L1 5 130 -6719 * 2898 182 44 6 chr5 127247737 127248379 -75837153 + L1MA1 LINE L1 3868 4533 -1613 17615 52 1 5 chr5 127248479 127250876 -75834656 - L1P LINE L1 -1031 5115 2729 6821 119 20 20 chr5 127250977 127252753 -75832779 + L1MA1 LINE L1 4522 6293 -9 2172 249 11 4 chr5 127252771 127253292 -75832240 + L1M2b LINE L1 441 965 -6601 617 154 106 0 chr5 127253303 127253426 -75832106 + L1M2b LINE L1 1026 1161 -6405 2520 208 24 14 chr5 127253467 127254129 -75831403 + L1M2b LINE L1 3505 4179 -3386 17883 77 8 2 chr5 127254245 127256756 -75828776 - L1P LINE L1 -3609 2537 13 2297 157 52 15 chr5 127256759 127257237 -75828295 - L1 LINE L1 -1760 4386 3891 12875 62 5 3 chr5 127257238 127259677 -75825855 - L1PA6 LINE L1 -4 6150 3700 14912 109 25 6 chr5 127259777 127262101 -75823431 - L1PA6 LINE L1 -3774 2372 5 2011 233 53 2 chr5 127262109 127262711 -75822821 + L1ME1 LINE L1 2328 2960 -3186 * 3646 237 34 11 chr5 127262707 127264430 -75821102 + L1ME1 LINE L1 4170 5935 -231 334 207 35 55 chr5 127264535 127264680 -75820852 + L1ME2 LINE L1 5895 6036 -128 216 299 0 15 chr5 127264744 127264811 -75820721 + CT-rich Low_complexity Low_complexity 1 66 0 399 198 103 0 chr5 127265137 127265253 -75820279 + L1MA10 LINE L1 6207 6334 0 2410 177 29 10 chr5 127266099 127266517 -75819015 - MSTB LTR MaLR 0 426 1 2418 127 16 5 chr5 127267092 127267462 -75818070 - THE1C LTR MaLR -1 374 1 10374 118 10 31 chr5 127267462 127269076 -75816456 - THE1C-int LTR MaLR 0 1580 1 2265 147 11 8 chr5 127269076 127269450 -75816082 - THE1C LTR MaLR 0 375 1 2199 153 35 143 chr5 127269625 127269800 -75815732 + L1MA9 LINE L1 5603 5795 -517 433 16 16 32 chr5 127269800 127269863 -75815669 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2199 153 35 143 chr5 127269863 127270440 -75815092 + L1MA9 LINE L1 5795 6273 -39 8495 224 110 4 chr5 127270481 127272966 -75812566 + L1PA13 LINE L1 1 2763 -4034 2105 156 4 29 chr5 127273070 127273520 -75812012 - L1 LINE L1 -1329 4817 4379 7019 54 0 5 chr5 127273520 127274709 -75810823 - L1PA4 LINE L1 0 6155 4971 398 243 47 9 chr5 127275001 127275108 -75810424 - MER81 DNA DNA 0 114 4 189 107 0 0 chr5 127275954 127275982 -75809550 + (TTA)n Simple_repeat Simple_repeat 2 29 0 218 263 74 64 chr5 127275994 127276092 -75809440 - MIR SINE MIR -64 144 47 229 250 83 0 chr5 127276472 127276544 -75808988 + MIR SINE MIR 70 147 -61 292 280 0 13 chr5 127276589 127276664 -75808868 + GA-rich Low_complexity Low_complexity 1 74 0 4804 88 14 0 chr5 127276731 127277382 -75808150 + PABL_A LTR ERV1 1 660 0 266 326 16 63 chr5 127277382 127277572 -75807960 - MIR3 SINE MIR -21 187 7 344 248 0 9 chr5 127277771 127277884 -75807648 + GA-rich Low_complexity Low_complexity 4 115 0 1726 108 103 142 chr5 127278253 127278516 -75807016 - MSTA LTR MaLR 0 428 186 2317 46 0 3 chr5 127278516 127278838 -75806694 - AluY SINE Alu 0 321 1 1726 108 103 142 chr5 127278838 127279018 -75806514 - MSTA LTR MaLR -242 186 1 2337 92 0 3 chr5 127281304 127281608 -75803924 - AluSg SINE Alu -7 303 1 209 320 86 39 chr5 127281791 127281919 -75803613 - L2 LINE L2 0 3272 3139 287 346 10 0 chr5 127282609 127282713 -75802819 + MIR SINE MIR 79 183 -79 525 298 11 31 chr5 127282997 127283188 -75802344 - MIR SINE MIR -12 250 64 32 26 0 0 chr5 127284278 127284317 -75801215 + AT_rich Low_complexity Low_complexity 1 39 0 1033 154 35 15 chr5 127285128 127285329 -75800203 + L1MB2 LINE L1 5949 6153 -18 467 250 148 41 chr5 127285780 127285976 -75799556 - MIR SINE MIR -42 220 4 899 300 46 22 chr5 127286108 127286521 -75799011 - Charlie7 DNA MER1_type -2089 523 101 1282 282 117 42 chr5 127286570 127287531 -75798001 + L1MEd LINE L1 143 1175 -5030 1281 218 72 21 chr5 127287796 127287811 -75797721 + L1MEd LINE L1 688 701 -5695 1827 187 3 0 chr5 127287811 127288111 -75797421 + AluJb SINE Alu 1 301 -11 1281 218 72 21 chr5 127288111 127288609 -75796923 + L1MEd LINE L1 701 1227 -5169 324 188 0 0 chr5 127288640 127288709 -75796823 + (TA)n Simple_repeat Simple_repeat 2 70 0 323 300 59 18 chr5 127288766 127289039 -75796493 + L1MEd LINE L1 1146 1429 -4788 450 233 33 44 chr5 127289152 127289332 -75796200 + L1MEd LINE L1 1564 1741 -4655 1010 203 37 46 chr5 127289368 127289693 -75795839 + L1MEd LINE L1 1728 2049 -4347 21 57 0 0 chr5 127289731 127289766 -75795766 + AT_rich Low_complexity Low_complexity 1 35 0 2144 150 0 0 chr5 127289766 127290073 -75795459 - AluSx SINE Alu -5 307 1 961 242 16 19 chr5 127290086 127290462 -75795070 + L1MEd LINE L1 2060 2434 -3962 587 118 0 10 chr5 127290467 127290569 -75794963 + L1MA3 LINE L1 6204 6304 -1 3928 111 13 9 chr5 127290628 127291261 -75794271 - L1PA6 LINE L1 -3 6151 5517 1329 311 75 14 chr5 127341347 127341829 -75743703 - MER115 DNA AcHobo -182 511 1 268 284 74 0 chr5 127341840 127341921 -75743611 - MIR SINE MIR -63 145 59 280 277 132 63 chr5 127342572 127342731 -75742801 - MIR SINE MIR -53 209 40 22 0 0 0 chr5 127342948 127342970 -75742562 + AT_rich Low_complexity Low_complexity 1 22 0 726 224 92 36 chr5 127343476 127343672 -75741860 - MER58A DNA MER1_type -15 209 3 340 241 119 64 chr5 127343892 127344161 -75741371 - MLT1H LTR MaLR -1 548 193 471 285 8 8 chr5 127344187 127344317 -75741215 - MLT1H LTR MaLR -415 134 5 12937 85 4 3 chr5 127345803 127348163 -75737369 + HERV9 LTR ERV1 4615 7053 -1346 2051 153 49 25 chr5 127348316 127348682 -75736850 + THE1C LTR MaLR 1 375 0 9539 135 50 43 chr5 127348682 127348729 -75736803 + THE1C-int LTR MaLR 1 46 -1534 2156 114 0 0 chr5 127348729 127349049 -75736483 + AluSc SINE Alu 1 320 0 9539 135 50 43 chr5 127349049 127350569 -75734963 + THE1C-int LTR MaLR 46 1580 0 2116 169 38 14 chr5 127350569 127350935 -75734597 + THE1C LTR MaLR 1 375 0 663 183 23 0 chr5 127352052 127352183 -75733349 + L1M4 LINE L1 4912 5045 -1101 1402 25 0 0 chr5 127352183 127352340 -75733192 + L1P2 LINE L1 5531 5687 -467 462 260 0 0 chr5 127352987 127353091 -75732441 + MLT1J1 LTR MaLR 71 174 -272 269 319 43 26 chr5 127353103 127353219 -75732313 - L3 LINE CR1 -188 1389 1272 1234 202 0 5 chr5 127353348 127353556 -75731976 + Tigger5 DNA MER2_type 2 208 -2115 460 156 52 21 chr5 127353552 127353648 -75731884 + Tigger5 DNA MER2_type 2225 2323 0 * 775 282 42 17 chr5 127353674 127353915 -75731617 + MIR SINE MIR 13 259 -3 521 297 35 39 chr5 127354708 127354940 -75730592 + MIR SINE MIR 32 262 0 189 435 38 0 chr5 127355296 127355427 -75730105 - L2 LINE L2 -1 3271 3136 2134 128 0 0 chr5 127355473 127355762 -75729770 + AluSx SINE Alu 5 293 -19 341 285 293 18 chr5 127355830 127356223 -75729309 - L2 LINE L2 -232 3040 2542 1239 293 129 101 chr5 127356278 127357820 -75727712 - L2 LINE L2 -1007 2307 723 25 31 0 0 chr5 127358854 127358886 -75726646 + AT_rich Low_complexity Low_complexity 1 32 0 454 243 10 0 chr5 127358981 127359084 -75726448 - MLT1J LTR MaLR -35 476 373 543 282 11 11 chr5 127359188 127359362 -75726170 - MLT1J LTR MaLR -319 192 19 21 82 0 0 chr5 127359686 127359735 -75725797 + AT_rich Low_complexity Low_complexity 1 49 0 2431 67 3 7 chr5 127359922 127360220 -75725312 - AluSp SINE Alu -16 297 1 4002 73 196 2 chr5 127360553 127361129 -75724403 - LTR12 LTR ERV1 0 688 1 8955 89 19 15 chr5 127361207 127362759 -75722773 - HERV9 LTR ERV1 0 8399 504 279 293 34 25 chr5 127362878 127363012 -75722520 + MLT1I LTR MaLR 281 383 -26 21 0 0 31 chr5 127363065 127363081 -75722451 + AT_rich Low_complexity Low_complexity 1 16 -15 1900 164 3 0 chr5 127363081 127363374 -75722158 + AluSq SINE Alu 1 294 -19 21 0 0 31 chr5 127363374 127363389 -75722143 + AT_rich Low_complexity Low_complexity 16 31 0 8574 191 122 19 chr5 127363837 127364916 -75720616 + L1MCa LINE L1 19 986 -5621 219 36 0 0 chr5 127364916 127364944 -75720588 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8574 191 122 19 chr5 127364944 127366251 -75719281 + L1MCa LINE L1 986 2691 -3916 924 209 0 0 chr5 127366274 127366465 -75719067 + L1MB3 LINE L1 4 194 -6669 9525 132 123 8 chr5 127366465 127367037 -75718495 + L1MB3 LINE L1 903 1408 -5454 207 0 0 0 chr5 127367037 127367060 -75718472 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9525 132 123 8 chr5 127367060 127368778 -75716754 + L1MB3 LINE L1 1408 3458 -3404 29852 35 5 0 chr5 127368796 127373349 -75712183 - L1PA3 LINE L1 -3 6152 1578 665 206 0 0 chr5 127373346 127373501 -75712031 - L1M4 LINE L1 -1216 4930 4776 * 4194 179 27 29 chr5 127373501 127374607 -75710925 + L1MB3 LINE L1 5790 6896 -3 2239 116 0 0 chr5 127374829 127375122 -75710410 + AluSg SINE Alu 1 293 -17 365 227 30 29 chr5 127375996 127376164 -75709368 + L1ME LINE L1 5585 5755 -366 217 290 0 0 chr5 127376288 127376350 -75709182 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1677 189 36 18 chr5 127376434 127376884 -75708648 + pTR5 LTR ERV1 743 1200 -1238 25245 99 5 11 chr5 127376984 127380121 -75705411 - HERV9 LTR ERV1 -3904 4495 1473 2323 110 0 0 chr5 127380121 127380422 -75705110 + AluY SINE Alu 1 301 -10 25245 99 5 11 chr5 127380422 127381887 -75703645 - HERV9 LTR ERV1 -6926 1473 1 3548 89 249 0 chr5 127381887 127382438 -75703094 - LTR12 LTR ERV1 0 688 1 817 234 72 47 chr5 127382517 127382795 -75702737 - pTR5 LTR ERV1 -1410 1028 744 269 288 62 12 chr5 127383967 127384047 -75701485 + L2 LINE L2 3112 3195 -77 321 236 0 14 chr5 127384571 127384643 -75700889 + Tigger5 DNA MER2_type 8 78 -2245 394 210 12 0 chr5 127384716 127384797 -75700735 + Tigger5 DNA MER2_type 2242 2323 0 28 0 0 0 chr5 127385054 127385082 -75700450 + AT_rich Low_complexity Low_complexity 1 28 0 1745 181 33 0 chr5 127385334 127385633 -75699899 - AluJb SINE Alu -3 309 1 1706 265 95 20 chr5 127385679 127386373 -75699159 - L1ME LINE L1 -5318 752 7 381 248 113 23 chr5 127387667 127387800 -75697732 - MIR3 SINE MIR -26 182 38 22 35 0 0 chr5 127387922 127387951 -75697581 + AT_rich Low_complexity Low_complexity 1 29 0 314 223 43 21 chr5 127388008 127388102 -75697430 - MLT1L LTR MaLR -342 273 178 352 296 81 26 chr5 127388291 127388559 -75696973 - L1MDa LINE L1 -3964 2576 2411 290 265 85 13 chr5 127388921 127389105 -75696427 - MLT1J2 LTR MaLR 0 450 267 409 194 144 94 chr5 127389184 127389344 -75696188 - MLT1B LTR MaLR -222 168 1 257 311 48 44 chr5 127389455 127389661 -75695871 + MLT1K LTR MaLR 325 531 -57 280 278 92 23 chr5 127389829 127390002 -75695530 - MLT1L LTR MaLR -1 614 430 226 276 0 0 chr5 127390097 127390155 -75695377 - MLT1K LTR MaLR -363 225 168 270 236 14 14 chr5 127390278 127390350 -75695182 - MLT1L LTR MaLR -543 72 1 758 193 29 0 chr5 127391359 127391530 -75694002 + MER53 DNA DNA 1 176 -13 518 239 90 55 chr5 127391658 127392166 -75693366 + MLT1F LTR MaLR 37 542 0 2171 128 0 0 chr5 127392336 127392632 -75692900 - AluSx SINE Alu -16 296 1 364 307 50 0 chr5 127392716 127392817 -75692715 + MIR SINE MIR 41 146 -62 377 271 146 7 chr5 127392831 127392982 -75692550 - MER117 DNA MER1_type -1 196 25 3758 155 42 19 chr5 127393723 127394721 -75690811 - L1MA9 LINE L1 -243 6069 5047 1712 205 38 26 chr5 127394869 127395260 -75690272 + MSTD LTR MaLR 1 396 0 411 178 0 0 chr5 127395414 127395487 -75690045 + Tigger5 DNA MER2_type 2251 2323 0 309 233 14 0 chr5 127395629 127395702 -75689830 + Tigger5 DNA MER2_type 2241 2314 -9 282 95 0 0 chr5 127395705 127395747 -75689785 + (CA)n Simple_repeat Simple_repeat 2 43 0 1237 318 134 37 chr5 127395755 127396952 -75688580 + L1MC4a LINE L1 2706 4018 -2128 1835 47 0 8 chr5 127397379 127397641 -75687891 - L1PA2 LINE L1 0 6155 5924 2296 193 96 96 chr5 127397796 127398105 -75687427 + L1MC3 LINE L1 6872 7180 -605 1649 123 0 5 chr5 127398105 127398325 -75687207 - AluSq SINE Alu -94 219 1 2296 193 96 96 chr5 127398325 127398915 -75686617 + L1MC3 LINE L1 7179 7771 -14 5626 133 30 16 chr5 127399069 127400248 -75685284 - L1MA6 LINE L1 0 6300 5111 549 320 80 55 chr5 127400452 127400999 -75684533 + HAL1b LINE L1 60 435 -913 2332 84 7 0 chr5 127401093 127401392 -75684140 - AluSc SINE Alu -8 301 1 236 331 38 0 chr5 127401419 127401552 -75683980 + L1MC4a LINE L1 4086 4223 -1923 343 305 54 38 chr5 127401670 127401909 -75683623 + L1MC4a LINE L1 4294 4536 -1610 2205 116 0 6 chr5 127401942 127402253 -75683279 - AluSc SINE Alu 0 309 1 337 309 72 16 chr5 127402561 127402924 -75682608 + L1MC4a LINE L1 4860 5242 -904 1050 229 30 28 chr5 127402937 127403300 -75682232 + L1MC4a LINE L1 5255 5618 -2190 22 0 0 0 chr5 127403308 127403330 -75682202 + AT_rich Low_complexity Low_complexity 1 22 0 528 136 0 85 chr5 127403419 127403537 -75681995 + MER50 LTR ERV1 497 604 -130 398 261 26 13 chr5 127403538 127403691 -75681841 - L1MA9 LINE L1 -119 6193 6039 539 223 0 0 chr5 127403776 127403879 -75681653 - FLAM_A SINE Alu -18 124 22 6959 206 53 8 chr5 127403904 127406589 -75678943 - L1MA9 LINE L1 -280 6032 3197 2364 98 0 0 chr5 127406589 127406885 -75678647 + AluSg SINE Alu 1 296 -14 2305 124 25 6 chr5 127406923 127407278 -75678254 - THE1B LTR MaLR -2 362 1 5276 212 24 6 chr5 127407289 127408556 -75676976 + L1P LINE L1 4108 5397 -749 369 0 0 0 chr5 127408561 127408602 -75676930 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1989 116 3 11 chr5 127408605 127408889 -75676643 - AluSx SINE Alu -30 282 1 609 236 34 0 chr5 127408890 127409068 -75676464 - L1MA9 LINE L1 -3213 2933 2750 279 213 33 0 chr5 127409078 127409139 -75676393 + L1MC4a LINE L1 5595 5657 -464 2179 150 19 8 chr5 127409144 127409503 -75676029 + THE1B LTR MaLR 2 364 0 10327 122 33 0 chr5 127409503 127411032 -75674500 + THE1B-int LTR MaLR 1 1580 0 2003 103 26 16 chr5 127411032 127411344 -75674188 + THE1B LTR MaLR 1 315 -49 753 232 240 16 chr5 127411357 127411741 -75673791 + L1MC4a LINE L1 5683 6152 -1656 315 0 0 0 chr5 127411752 127411787 -75673745 + (TA)n Simple_repeat Simple_repeat 2 36 0 311 370 15 15 chr5 127411860 127411995 -75673537 + L1M4 LINE L1 4054 4188 -1958 1370 306 187 42 chr5 127412148 127413611 -75671921 - L2 LINE L2 -1448 1866 192 247 111 0 0 chr5 127414496 127414532 -75671000 - MLT1E2 LTR MaLR -439 187 152 1285 192 40 147 chr5 127415752 127416020 -75669512 - MLT1D LTR MaLR -8 497 202 2340 105 74 6 chr5 127416020 127416371 -75669161 - THE1C LTR MaLR 0 375 1 10290 108 30 40 chr5 127416373 127417966 -75667566 - THE1C-int LTR MaLR -2 1578 3 2246 109 75 11 chr5 127417968 127418316 -75667216 - THE1C LTR MaLR -2 373 4 1285 192 40 147 chr5 127418316 127418598 -75666934 - MLT1D LTR MaLR -305 200 1 300 129 14 43 chr5 127419235 127419305 -75666227 + THE1A LTR MaLR 6 73 -291 1308 179 16 0 chr5 127419407 127419659 -75665873 + THE1A LTR MaLR 100 355 0 1724 171 78 0 chr5 127419796 127420118 -75665414 + MER7A DNA MER2_type 1 345 -1 1957 84 0 8 chr5 127421466 127421716 -75663816 - AluY SINE Alu -63 248 1 616 280 140 14 chr5 127421963 127422170 -75663362 - MIR SINE MIR -10 252 20 192 296 16 122 chr5 127424416 127424605 -75660927 - L2 LINE L2 -109 3163 2995 220 275 66 22 chr5 127424617 127424708 -75660824 - L2 LINE L2 0 3313 3219 423 300 42 16 chr5 127426327 127426517 -75659015 - L1MEc LINE L1 -4638 1758 1564 3285 107 16 0 chr5 127426521 127427018 -75658514 + L1PA15 LINE L1 5628 6132 -33 228 168 25 42 chr5 127427020 127427036 -75658496 + (TA)n Simple_repeat Simple_repeat 1 16 -101 2112 110 0 10 chr5 127427036 127427328 -75658204 + AluSg1 SINE Alu 1 289 -20 228 168 25 42 chr5 127427328 127427430 -75658102 + (TA)n Simple_repeat Simple_repeat 16 117 0 231 202 8 73 chr5 127427444 127427568 -75657964 + (TA)n Simple_repeat Simple_repeat 1 116 0 270 133 0 40 chr5 127427580 127427655 -75657877 + (TA)n Simple_repeat Simple_repeat 1 72 0 272 200 31 15 chr5 127427830 127427895 -75657637 + MIR3 SINE MIR 132 197 -11 228 246 16 0 chr5 127428231 127428292 -75657240 - L1MEc LINE L1 -4830 1566 1505 1536 183 53 20 chr5 127428345 127428645 -75656887 - AluJb SINE Alu -2 310 1 247 83 0 21 chr5 127428693 127428741 -75656791 - L1M4 LINE L1 -419 5755 5709 1380 152 15 8 chr5 127428844 127429108 -75656424 - L1MB3 LINE L1 0 6183 5918 269 77 0 0 chr5 127429108 127429147 -75656385 + L1MB3 LINE L1 5870 5908 -275 257 340 56 87 chr5 127429351 127429777 -75655755 + L2 LINE L2 2858 3270 -2 741 104 9 0 chr5 127429992 127430107 -75655425 - L1M2 LINE L1 -487 5813 5698 * 2562 152 20 9 chr5 127430084 127430782 -75654750 + L1M2 LINE L1 5026 5725 -575 186 355 101 26 chr5 127431034 127431223 -75654309 + L3b LINE CR1 1300 1502 -81 1593 178 85 25 chr5 127431386 127431740 -75653792 - THE1C LTR MaLR 0 375 1 8409 141 31 58 chr5 127431740 127433363 -75652169 - THE1C-int LTR MaLR 0 1580 3 1587 168 99 34 chr5 127433365 127433717 -75651815 - THE1C LTR MaLR 0 375 1 389 309 143 84 chr5 127433975 127434209 -75651323 + L2 LINE L2 1616 1835 -1479 195 42 0 0 chr5 127434209 127434233 -75651299 + (TTCTC)n Simple_repeat Simple_repeat 5 28 0 389 309 143 84 chr5 127434233 127434341 -75651191 + L2 LINE L2 1835 1935 -1379 670 197 33 6 chr5 127434341 127434524 -75651008 - L1MB4 LINE L1 0 6180 5993 389 309 143 84 chr5 127434524 127434705 -75650827 + L2 LINE L2 1935 2171 -1143 26 0 0 0 chr5 127434705 127434731 -75650801 + AT_rich Low_complexity Low_complexity 1 26 0 195 373 118 7 chr5 127434845 127434998 -75650534 + L2 LINE L2 2891 3060 -212 261 248 200 57 chr5 127435016 127435121 -75650411 + L2 LINE L2 3180 3299 -14 708 274 19 14 chr5 127436209 127436417 -75649115 - MIR SINE MIR 0 262 54 2166 108 37 0 chr5 127438132 127438429 -75647103 + AluSg SINE Alu 1 308 -2 619 112 0 2 chr5 127438748 127438844 -75646688 + L1PA16 LINE L1 5877 5970 -185 1176 121 22 0 chr5 127438897 127439079 -75646453 + L1PA16 LINE L1 5972 6157 -9 189 107 0 0 chr5 127439903 127439931 -75645601 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 232 324 0 0 chr5 127439931 127439999 -75645533 - L2 LINE L2 0 3313 3246 26 50 0 0 chr5 127441285 127441325 -75644207 + AT_rich Low_complexity Low_complexity 1 40 0 4626 114 18 49 chr5 127441421 127442239 -75643293 - pTR5 LTR ERV1 0 2438 1646 2130 49 4 0 chr5 127442339 127442602 -75642930 + L1PA5 LINE L1 5875 6138 -16 486 33 0 0 chr5 127442605 127442665 -75642867 + (TAA)n Simple_repeat Simple_repeat 2 61 0 3464 159 17 6 chr5 127442665 127443491 -75642041 + L1PA16 LINE L1 5037 5863 -303 512 128 128 0 chr5 127443491 127443608 -75641924 - L1M LINE L1 -916 5389 5258 1029 158 22 35 chr5 127443608 127443836 -75641696 - THE1C LTR MaLR 0 375 151 3035 169 7 26 chr5 127443836 127443920 -75641612 + L1PA16 LINE L1 5583 5667 -499 2525 52 0 0 chr5 127443920 127444210 -75641322 + AluY SINE Alu 1 290 -21 3035 169 7 26 chr5 127444210 127444711 -75640821 + L1PA16 LINE L1 5667 6157 -9 17402 160 30 84 chr5 127444737 127447410 -75638122 + L1M1 LINE L1 17 2631 -4934 1134 214 76 31 chr5 127447410 127447699 -75637833 + AluJo SINE Alu 11 312 0 17402 160 30 84 chr5 127447699 127449468 -75636064 + L1M1 LINE L1 2631 4493 -3072 836 103 16 0 chr5 127449468 127449594 -75635938 - MER75B DNA T2_type 0 243 116 29067 42 5 0 chr5 127449597 127454139 -75631393 + L1PA4 LINE L1 1600 6152 -3 636 128 51 8 chr5 127454161 127454278 -75631254 - MER75B DNA T2_type -121 122 1 5865 206 68 4 chr5 127454280 127456167 -75629365 + L1M1 LINE L1 4493 6687 -878 2046 132 19 29 chr5 127456167 127456546 -75628986 + THE1C LTR MaLR 1 375 0 5865 206 68 4 chr5 127456546 127456677 -75628855 + L1M1 LINE L1 6687 6808 -757 3139 194 22 51 chr5 127456678 127458220 -75627312 - L1PA16 LINE L1 -304 5862 4379 3969 221 11 27 chr5 127458228 127459298 -75626234 + L1 LINE L1 3287 4339 -1807 549 233 101 0 chr5 127459435 127459564 -75625968 - MER5A DNA MER1_type -6 183 42 322 259 48 41 chr5 127459441 127459567 -75625965 + MER5A DNA MER1_type 34 163 -26 * 195 42 0 0 chr5 127459567 127459591 -75625941 + (CTG)n Simple_repeat Simple_repeat 1 24 0 322 259 48 41 chr5 127459591 127459611 -75625921 + MER5A DNA MER1_type 163 181 -8 309 329 93 27 chr5 127460081 127460306 -75625226 - L3 LINE CR1 -272 1305 1066 649 290 28 35 chr5 127460811 127461094 -75624438 - LTR16A LTR ERVL -109 341 61 1534 198 122 6 chr5 127461479 127461780 -75623752 + MLT2C1 LTR ERVL 1 350 -47 464 81 14 0 chr5 127461780 127461854 -75623678 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 1534 198 122 6 chr5 127461854 127461906 -75623626 + MLT2C1 LTR ERVL 350 395 -2 433 312 139 17 chr5 127461977 127462150 -75623382 - MIR3 SINE MIR -6 202 9 183 326 0 0 chr5 127462464 127462513 -75623019 + L2 LINE L2 3193 3241 -31 29068 111 11 63 chr5 127462571 127469061 -75616471 - L1PA7 LINE L1 -1 6153 12 272 333 63 18 chr5 127470132 127470243 -75615289 + MIR SINE MIR 30 145 -63 317 349 27 13 chr5 127470325 127470474 -75615058 + L3 LINE CR1 1424 1574 -3 743 300 141 24 chr5 127470584 127471234 -75614298 + L2 LINE L2 2578 3304 -9 1020 261 171 46 chr5 127471238 127472071 -75613461 - L2 LINE L2 -1 3312 2361 20680 189 29 17 chr5 127472091 127478534 -75606998 - L1PA11 LINE L1 0 7612 9 1445 272 31 0 chr5 127478698 127479114 -75606418 + L1PB1 LINE L1 125 553 -6310 2395 165 79 1 chr5 127479155 127479945 -75605587 + L1PB1 LINE L1 627 1622 -5241 5612 201 64 11 chr5 127480066 127480412 -75605120 + L1PB1 LINE L1 2655 2981 -3881 1785 77 0 0 chr5 127480412 127480634 -75604898 - AluY SINE Alu -4 307 86 5612 201 64 11 chr5 127480634 127481844 -75603688 + L1PB1 LINE L1 2981 4296 -2566 * 5706 126 9 14 chr5 127481839 127482995 -75602537 + L1PB1 LINE L1 5715 6866 -1 2335 88 3 0 chr5 127483195 127483491 -75602041 - AluSx SINE Alu -14 298 2 26 98 0 0 chr5 127483667 127483749 -75601783 + AT_rich Low_complexity Low_complexity 1 82 0 1656 176 7 35 chr5 127483797 127484087 -75601445 + AluJo SINE Alu 5 286 -26 237 33 0 0 chr5 127484106 127484136 -75601396 + (TG)n Simple_repeat Simple_repeat 2 31 0 366 293 45 45 chr5 127484243 127484376 -75601156 - MIR SINE MIR -59 149 17 201 158 0 0 chr5 127485587 127485625 -75599907 + T-rich Low_complexity Low_complexity 1 38 0 4962 188 53 20 chr5 127588101 127589198 -75496334 + L1MC2 LINE L1 5200 6336 -8 1056 212 75 114 chr5 127589226 127589797 -75495735 - L1MC4a LINE L1 -79 7729 7181 19661 31 2 2 chr5 127589935 127592347 -75493185 - L1P LINE L1 -914 5232 2821 370 95 8 153 chr5 127592447 127592709 -75492823 + L1PA2 LINE L1 5020 5243 -903 6227 39 2 30 chr5 127592782 127593662 -75491870 + L1PA2 LINE L1 5300 6155 0 4339 87 7 0 chr5 127593689 127594653 -75490879 - L1PA6 LINE L1 -307 5847 4880 627 134 17 17 chr5 127594648 127594767 -75490765 - L1PA6 LINE L1 -3364 2782 2664 * 564 329 72 31 chr5 127595432 127595888 -75489644 + L1MC4a LINE L1 2453 2927 -3219 229 254 17 0 chr5 127595893 127595952 -75489580 + L1P LINE L1 2956 3015 -3131 33 25 0 0 chr5 127595953 127595993 -75489539 + AT_rich Low_complexity Low_complexity 1 40 0 348 301 35 83 chr5 127596035 127596347 -75489185 + L1MC4a LINE L1 4943 5239 -907 1507 258 40 24 chr5 127596355 127596929 -75488603 + L1MC4a LINE L1 5254 5836 -1972 453 233 17 43 chr5 127597385 127597501 -75488031 - L2 LINE L2 -8 3305 3193 1861 177 10 65 chr5 127597580 127597993 -75487539 - MLT1B LTR MaLR 0 390 1 8136 38 13 8 chr5 127598082 127599150 -75486382 + L1P LINE L1 2042 3114 -3032 5884 105 2 9 chr5 127600096 127600995 -75484537 - L1P LINE L1 -3468 2678 1786 1253 89 11 0 chr5 127600986 127601165 -75484367 + L1P LINE L1 1597 1777 -4369 * 239 397 43 5 chr5 127601215 127601424 -75484108 + LTR67 LTR ERVL 334 550 -7 248 282 74 54 chr5 127601485 127601634 -75483898 + L2 LINE L2 3084 3235 -78 1804 230 35 71 chr5 127601958 127602533 -75482999 + MLT2B3 LTR ERVL 1 554 0 982 122 134 0 chr5 127602548 127602720 -75482812 - MSTB1 LTR MaLR 0 432 238 305 291 70 54 chr5 127603946 127604204 -75481328 + HAL1 LINE L1 9 270 -2237 723 157 0 8 chr5 127604251 127604385 -75481147 + L1MA7 LINE L1 6152 6284 -7 24 0 0 0 chr5 127604385 127604409 -75481123 + AT_rich Low_complexity Low_complexity 1 24 0 191 263 38 25 chr5 127606171 127606251 -75479281 - L2 LINE L2 -1106 2208 2128 2049 153 3 12 chr5 127607213 127607559 -75477973 + MER2 DNA MER2_type 1 343 -1 235 321 0 12 chr5 127607562 127607646 -75477886 + MIR SINE MIR 32 114 -148 418 336 23 16 chr5 127607890 127608018 -75477514 - L2 LINE L2 0 3272 3144 671 325 150 16 chr5 127608192 127608645 -75476887 - L2 LINE L2 -371 2943 2430 420 288 117 66 chr5 127609445 127610123 -75475409 - L2 LINE L2 -905 2409 1698 21 0 0 0 chr5 127610287 127610308 -75475224 + AT_rich Low_complexity Low_complexity 1 21 0 300 255 0 0 chr5 127611121 127611223 -75474309 + T-rich Low_complexity Low_complexity 1 102 0 205 260 10 58 chr5 127611268 127611372 -75474160 + CT-rich Low_complexity Low_complexity 3 101 0 2065 157 17 0 chr5 127611521 127611878 -75473654 + L1PA16 LINE L1 5804 6166 0 1109 91 71 5 chr5 127612353 127612551 -75472981 + Tigger3(Golem) DNA MER2_type 2310 2520 -509 5305 83 6 0 chr5 127612551 127613276 -75472256 - L1PA7 LINE L1 -1653 4493 3765 6587 66 17 10 chr5 127613276 127614162 -75471370 + L1PA7 LINE L1 4504 5405 -749 2266 82 3 3 chr5 127614162 127614453 -75471079 + AluY SINE Alu 3 293 -18 6587 66 17 10 chr5 127614453 127615204 -75470328 + L1PA7 LINE L1 5405 6149 -5 3003 160 9 15 chr5 127615204 127615728 -75469804 + Tigger3(Golem) DNA MER2_type 2509 3029 0 206 105 26 0 chr5 127616148 127616186 -75469346 + (TA)n Simple_repeat Simple_repeat 1 39 0 450 291 52 52 chr5 127616398 127616666 -75468866 - L1MC/D LINE L1 -2124 5684 5417 180 356 30 50 chr5 127617809 127617910 -75467622 + L3b LINE CR1 1367 1465 -118 23 55 0 18 chr5 127618758 127618790 -75466742 + AT_rich Low_complexity Low_complexity 1 33 -21 7599 29 0 0 chr5 127618790 127620197 -75465335 + L1PA4 LINE L1 4742 6152 -3 23 55 0 18 chr5 127620197 127620219 -75465313 + AT_rich Low_complexity Low_complexity 33 54 0 187 376 28 18 chr5 127620219 127620328 -75465204 - MIR SINE MIR -133 129 20 1097 155 87 43 chr5 127620439 127620716 -75464816 + MSTB1 LTR MaLR 1 289 -143 210 338 14 50 chr5 127620917 127621056 -75464476 + MIR SINE MIR 59 192 -70 514 296 128 1 chr5 127621059 127621255 -75464277 + MIR SINE MIR 19 243 -19 25 0 0 0 chr5 127622530 127622555 -75462977 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 127623160 127623184 -75462348 + AT_rich Low_complexity Low_complexity 1 24 0 206 270 183 24 chr5 127624174 127624300 -75461232 + MIR SINE MIR 65 210 -52 1887 120 8 0 chr5 127624839 127625105 -75460427 + AluSg SINE Alu 43 310 0 1057 268 89 61 chr5 127625334 127625760 -75459772 - L2 LINE L2 -14 3299 2862 1028 267 20 62 chr5 127625789 127626141 -75459391 - L2 LINE L2 -357 2957 2621 262 163 0 0 chr5 127626157 127626206 -75459326 + L2 LINE L2 2196 2244 -1070 366 229 0 0 chr5 127626212 127626282 -75459250 - Tigger5 DNA MER2_type -4 2319 2250 294 211 0 0 chr5 127626253 127626305 -75459227 - Tigger5 DNA MER2_type -2271 52 1 * 1421 274 137 11 chr5 127626346 127626871 -75458661 + L2 LINE L2 2306 2896 -418 571 245 135 36 chr5 127626965 127627157 -75458375 - MIR SINE MIR 0 262 52 558 250 75 40 chr5 127631698 127631950 -75453582 + L1M4 LINE L1 2 262 -6280 1186 248 56 13 chr5 127632008 127632574 -75452958 + L1M4 LINE L1 1818 2498 -4148 732 128 17 17 chr5 127632588 127632729 -75452803 + AluSp/q SINE Alu 170 310 0 603 192 172 23 chr5 127632729 127633035 -75452497 + L1M4 LINE L1 2510 2866 -3778 431 269 70 47 chr5 127633465 127633636 -75451896 - MIR3 SINE MIR -31 177 3 300 348 107 24 chr5 127633921 127634174 -75451358 + L2 LINE L2 2228 2501 -813 252 208 255 28 chr5 127634185 127634291 -75451241 + MIR SINE MIR 20 149 -113 185 353 24 24 chr5 127634774 127634859 -75450673 - L2 LINE L2 -2 3311 3227 436 239 22 65 chr5 127635028 127635166 -75450366 - MIR SINE MIR 0 262 131 21 82 0 0 chr5 127635176 127635225 -75450307 + AT_rich Low_complexity Low_complexity 1 49 0 379 216 0 14 chr5 127635688 127635762 -75449770 - MIR SINE MIR -183 79 7 363 386 51 0 chr5 127635794 127635970 -75449562 - L2 LINE L2 -2405 909 725 2876 192 94 10 chr5 127636196 127636867 -75448665 - LTR8A LTR ERV1 0 727 1 2273 199 44 26 chr5 127637868 127638500 -75447032 - LTR27 LTR ERV1 -134 502 3 14440 151 46 52 chr5 127638501 127641005 -75444527 - LTR27-int LTR ERV1 -1 6995 4478 1925 141 0 10 chr5 127641005 127641295 -75444237 - AluSx SINE Alu -25 287 1 14440 151 46 52 chr5 127641295 127643167 -75442365 - LTR27-int LTR ERV1 -2518 4478 632 390 167 26 88 chr5 127643193 127643307 -75442225 - LTR27-int LTR ERV1 -886 3994 3888 * 507 128 0 23 chr5 127643303 127643389 -75442143 - LTR27-int LTR ERV1 -454 4763 4680 4544 182 80 52 chr5 127643394 127644417 -75441115 - LTR27-int LTR ERV1 -5634 1457 406 860 216 12 0 chr5 127644423 127644590 -75440942 + AluSg/x SINE Alu 137 305 -7 698 120 0 8 chr5 127644624 127644741 -75440791 + (GGAA)n Simple_repeat Simple_repeat 4 119 0 501 230 164 49 chr5 127644744 127644970 -75440562 - LTR27-int LTR ERV1 -6839 252 1 2304 216 37 19 chr5 127644975 127645639 -75439893 - LTR27 LTR ERV1 -2 634 11 36 23 0 0 chr5 127646721 127646764 -75438768 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr5 127647151 127647179 -75438353 + AT_rich Low_complexity Low_complexity 1 28 0 207 333 115 18 chr5 127647465 127647630 -75437902 + L2 LINE L2 1915 2095 -1219 24 0 0 0 chr5 127650963 127650987 -75434545 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr5 127651396 127651431 -75434101 + AT_rich Low_complexity Low_complexity 1 35 0 490 259 83 96 chr5 127651446 127651759 -75433773 - L1MD2 LINE L1 -124 6733 6425 * 1374 249 68 14 chr5 127651753 127652267 -75433265 - L1MD2 LINE L1 -744 5900 5359 975 183 0 6 chr5 127652267 127652442 -75433090 + AluJb SINE Alu 122 295 -17 1021 236 38 49 chr5 127652467 127652934 -75432598 - L1MD2 LINE L1 -3668 2976 2517 1337 306 72 18 chr5 127653200 127653697 -75431835 + L1M4b LINE L1 391 914 -5945 * 2764 195 35 26 chr5 127653691 127654442 -75431090 - L1MD2 LINE L1 -4292 2354 1521 5444 136 25 11 chr5 127654462 127655395 -75430137 - L1PA16 LINE L1 -1 6165 5219 681 305 140 59 chr5 127655387 127656337 -75429195 - L1MD2 LINE L1 -5448 1094 68 * 462 315 60 47 chr5 127656372 127656904 -75428628 - L1MEc LINE L1 -3594 2621 2125 388 256 8 48 chr5 127657471 127657596 -75427936 + L2 LINE L2 3127 3246 -67 241 261 0 0 chr5 127658294 127658363 -75427169 + L1MC4 LINE L1 6634 6702 -1340 237 200 0 0 chr5 127658333 127658378 -75427154 - L1MC4 LINE L1 -1340 6702 6658 * 228 292 131 29 chr5 127658740 127658782 -75426750 - MLT1K LTR MaLR -19 569 533 360 0 0 0 chr5 127658782 127658822 -75426710 + (TAA)n Simple_repeat Simple_repeat 1 40 0 228 292 131 29 chr5 127658822 127658916 -75426616 - MLT1K LTR MaLR -55 533 419 230 245 0 0 chr5 127658918 127658971 -75426561 + (CA)n Simple_repeat Simple_repeat 2 54 0 243 325 0 12 chr5 127659179 127659262 -75426270 - MLT1K LTR MaLR -467 121 40 202 231 0 15 chr5 127659977 127660042 -75425490 + (TA)n Simple_repeat Simple_repeat 2 65 0 492 361 70 0 chr5 127660778 127661008 -75424524 - MIR SINE MIR 0 262 17 22 35 0 0 chr5 127661628 127661657 -75423875 + AT_rich Low_complexity Low_complexity 1 29 0 201 383 18 30 chr5 127661802 127661954 -75423578 + MIR3 SINE MIR 3 154 -54 2458 77 0 0 chr5 127661954 127662254 -75423278 - AluY SINE Alu -10 301 2 201 383 18 30 chr5 127662254 127662268 -75423264 + MIR3 SINE MIR 154 167 -41 1235 263 52 36 chr5 127662433 127662817 -75422715 - MLT1F1 LTR MaLR -1 566 177 10436 181 67 47 chr5 127662916 127665654 -75419878 + L1PA15-16 LINE L1 847 3665 -3184 2101 163 74 17 chr5 127665654 127665986 -75419546 - MSTA LTR MaLR 0 428 67 2418 120 3 38 chr5 127665986 127666377 -75419155 - MER51B LTR ERV1 0 377 1 2101 163 74 17 chr5 127666377 127666449 -75419083 - MSTA LTR MaLR -361 67 1 9430 225 25 19 chr5 127666449 127666657 -75418875 + L1PA15-16 LINE L1 3661 3866 -2983 2346 127 8 22 chr5 127666657 127667026 -75418506 + THE1B LTR MaLR 1 364 0 9430 225 25 19 chr5 127667026 127669239 -75416293 + L1PA15-16 LINE L1 3866 6098 -751 3191 202 123 8 chr5 127669240 127670042 -75415490 + L1PBa LINE L1 261 1155 -5708 8636 184 29 23 chr5 127670052 127673442 -75412090 + L1PBa LINE L1 1308 4714 -2148 268 322 125 27 chr5 127673652 127673947 -75411585 + L2 LINE L2 2305 2628 -686 202 346 103 29 chr5 127674171 127674307 -75411225 + L2 LINE L2 3095 3240 -32 29 0 0 0 chr5 127674369 127674398 -75411134 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 127674445 127674477 -75411055 + AT_rich Low_complexity Low_complexity 1 32 0 769 142 13 77 chr5 127674478 127674633 -75410899 + L1PA16 LINE L1 6001 6145 -21 196 360 59 42 chr5 127675022 127675311 -75410221 + L2 LINE L2 2282 2575 -739 730 285 107 4 chr5 127675616 127675879 -75409653 - L1MC4a LINE L1 -1943 5865 5576 21 57 0 0 chr5 127677117 127677152 -75408380 + AT_rich Low_complexity Low_complexity 1 35 0 2490 64 0 0 chr5 127677396 127677693 -75407839 + AluY SINE Alu 4 300 -11 476 229 9 9 chr5 127677714 127677823 -75407709 + Charlie1 DNA MER1_type 13 121 -2640 * 4333 220 100 17 chr5 127677817 127679050 -75406482 + Charlie1 DNA MER1_type 1422 2756 -5 21 0 0 0 chr5 127680678 127680699 -75404833 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 127680978 127681003 -75404529 + AT_rich Low_complexity Low_complexity 1 25 0 779 313 57 6 chr5 127681023 127681339 -75404193 - MER102b DNA MER1_type -9 332 1 2550 37 0 3 chr5 127681978 127682276 -75403256 - AluY SINE Alu -14 297 1 315 221 158 11 chr5 127683035 127683130 -75402402 - MIR SINE MIR -109 153 45 402 84 42 0 chr5 127684930 127685001 -75400531 - L1MA3 LINE L1 0 6305 6232 280 254 53 44 chr5 127685418 127685532 -75400000 + L1ME LINE L1 5510 5624 -497 29 28 0 0 chr5 127685649 127685685 -75399847 + AT_rich Low_complexity Low_complexity 1 36 0 993 268 166 31 chr5 127685695 127686261 -75399271 - L2 LINE L2 0 3313 2660 1896 234 83 39 chr5 127686856 127687373 -75398159 - MLT1F1 LTR MaLR 0 567 28 290 250 29 0 chr5 127687831 127687899 -75397633 - L2 LINE L2 -4 3309 3240 814 142 31 0 chr5 127687913 127688040 -75397492 - FLAM_C SINE Alu -12 131 1 5685 106 0 0 chr5 127689106 127690074 -75395458 - L1PA13 LINE L1 -15 6148 5190 2727 82 3 0 chr5 127690211 127690565 -75394967 + THE1A LTR MaLR 1 355 0 11195 104 19 0 chr5 127690565 127692115 -75393417 + THE1A-int LTR MaLR 1 1580 0 2657 99 3 0 chr5 127692115 127692469 -75393063 + THE1A LTR MaLR 1 355 0 2352 103 0 0 chr5 127693760 127694072 -75391460 + AluSq SINE Alu 1 312 -1 22 70 0 0 chr5 127694217 127694260 -75391272 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr5 127694432 127694463 -75391069 + AT_rich Low_complexity Low_complexity 1 31 0 251 217 43 0 chr5 127694639 127694731 -75390801 + (TA)n Simple_repeat Simple_repeat 2 97 0 2271 92 3 0 chr5 127695324 127695616 -75389916 - AluSg SINE Alu -17 293 1 26 0 0 0 chr5 127696729 127696755 -75388777 + AT_rich Low_complexity Low_complexity 1 26 0 288 0 0 0 chr5 127696807 127696839 -75388693 + (TG)n Simple_repeat Simple_repeat 1 32 0 294 282 58 19 chr5 127697601 127697757 -75387775 - MER103 DNA DNA -2 164 3 184 340 0 0 chr5 127698102 127698155 -75387377 + L2 LINE L2 3261 3313 0 418 308 65 76 chr5 127698349 127698732 -75386800 - L2 LINE L2 -800 2514 2136 1514 235 0 3 chr5 127699702 127700068 -75385464 + L1M4 LINE L1 3420 3784 -2362 1894 196 48 90 chr5 127700156 127700722 -75384810 + MLT1F LTR MaLR 1 542 0 459 0 0 0 chr5 127701259 127701310 -75384222 + (TA)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr5 127701309 127701330 -75384202 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 420 291 35 29 chr5 127701464 127701636 -75383896 - MER20B DNA MER1_type -609 174 2 1822 136 42 3 chr5 127802295 127802582 -75282950 + AluSx SINE Alu 1 298 -14 462 255 173 30 chr5 127802592 127802806 -75282726 - MIR SINE MIR -6 256 9 3784 147 23 40 chr5 127803106 127803848 -75281684 + L1PB2 LINE L1 5420 6148 -3 439 284 65 35 chr5 127803873 127804074 -75281458 - L2 LINE L2 -938 2376 2170 1978 170 3 6 chr5 127805077 127805389 -75280143 + AluJb SINE Alu 1 311 -1 4076 158 43 1 chr5 127805846 127806549 -75278983 + MER44D DNA MER2_type 2 605 0 182 200 80 0 chr5 127806709 127806759 -75278773 - MIR SINE MIR -102 160 107 551 269 154 5 chr5 127806990 127807198 -75278334 + MIR SINE MIR 11 249 -13 759 196 43 37 chr5 127807227 127807390 -75278142 + FAM SINE Alu 2 165 -10 2240 90 3 0 chr5 127807784 127808074 -75277458 + AluSp SINE Alu 1 291 -22 460 208 185 23 chr5 127808171 127808301 -75277231 + MER5A DNA MER1_type 39 189 0 749 202 0 0 chr5 127808713 127808837 -75276695 - FLAM_A SINE Alu -9 124 1 269 296 80 0 chr5 127808959 127809047 -75276485 - MIR SINE MIR -119 143 49 230 171 24 0 chr5 127809113 127809154 -75276378 + MER44D DNA MER2_type 632 673 -32 237 189 33 100 chr5 127809247 127809337 -75276195 - MER103 DNA DNA -80 86 3 2355 100 0 0 chr5 127809417 127809716 -75275816 - AluSx SINE Alu -13 299 1 473 188 45 9 chr5 127810019 127810131 -75275401 - LTR24B LTR ERV1 -7 569 454 1649 33 47 0 chr5 127810426 127810638 -75274894 + LTR17 LTR ERV1 104 325 -455 285 29 0 0 chr5 127810638 127810672 -75274860 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 5128 132 40 2 chr5 127810672 127812130 -75273402 + L1PA16 LINE L1 4649 6156 -10 275 304 75 49 chr5 127812656 127813065 -75272467 + LTR33 LTR ERVL 47 513 -8 358 301 42 35 chr5 127813144 127813287 -75272245 + L2 LINE L2 3169 3312 -1 37768 73 11 3 chr5 127813853 127819964 -75265568 + L1PA5 LINE L1 3 6163 0 45 19 0 0 chr5 127821046 127821098 -75264434 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 127821311 127821333 -75264199 + AT_rich Low_complexity Low_complexity 1 22 0 4412 154 84 37 chr5 127823737 127823825 -75261707 + Tigger3b DNA MER2_type 1 83 -2945 1894 170 0 0 chr5 127823825 127824114 -75261418 + AluSx SINE Alu 1 289 -23 180 0 0 0 chr5 127824117 127824137 -75261395 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 4412 154 84 37 chr5 127824137 127824644 -75260888 + Tigger3b DNA MER2_type 84 566 -2462 2214 94 31 0 chr5 127824644 127824932 -75260600 + AluSp SINE Alu 1 297 -16 4412 154 84 37 chr5 127824932 127825018 -75260514 + Tigger3b DNA MER2_type 566 646 -2382 2936 9 0 0 chr5 127825018 127825336 -75260196 + AluYb8 SINE Alu 1 318 0 4412 154 84 37 chr5 127825336 127825707 -75259825 + Tigger3b DNA MER2_type 646 1109 -122 2274 143 38 60 chr5 127825876 127826155 -75259377 - HUERS-P3 LTR ERV1 -1317 7602 7335 2263 114 0 0 chr5 127826155 127826452 -75259080 + AluSq SINE Alu 1 297 -16 2274 143 38 60 chr5 127826452 127826619 -75258913 - HUERS-P3 LTR ERV1 -1584 7335 7166 * 38552 143 13 7 chr5 127826593 127833178 -75252354 - HUERS-P3 LTR ERV1 -2094 6825 122 2046 139 3 23 chr5 127833178 127833481 -75252051 - AluSx SINE Alu -15 297 1 38552 143 13 7 chr5 127833481 127833601 -75251931 - HUERS-P3 LTR ERV1 -8797 122 4 378 372 63 5 chr5 127834029 127834220 -75251312 + ERVL LTR ERVL 4084 4285 -1479 1880 151 28 7 chr5 127834220 127834505 -75251027 + AluJo SINE Alu 1 291 -21 28 0 0 0 chr5 127834507 127834535 -75250997 + AT_rich Low_complexity Low_complexity 1 28 0 1167 183 107 32 chr5 127834545 127834797 -75250735 + AluJb SINE Alu 4 274 -38 632 57 23 0 chr5 127834805 127834893 -75250639 + (GGGA)n Simple_repeat Simple_repeat 4 93 0 901 349 54 45 chr5 127834898 127835422 -75250110 + ERVL LTR ERVL 4234 4769 -885 1615 190 22 25 chr5 127835422 127835786 -75249746 + MLT1A1 LTR MaLR 1 363 -2 901 349 54 45 chr5 127835786 127835998 -75249534 + ERVL LTR ERVL 4769 4977 -677 658 278 42 19 chr5 127836615 127836874 -75248658 + LTR16C LTR ERVL 227 491 0 731 169 0 15 chr5 127837670 127837800 -75247732 + FLAM_A SINE Alu 1 128 -5 204 111 0 0 chr5 127838996 127839032 -75246500 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1699 128 68 0 chr5 127839036 127839302 -75246230 - AluSq SINE Alu -29 284 1 1595 188 27 3 chr5 127839692 127839984 -75245548 - AluJo SINE Alu -13 299 1 460 261 106 17 chr5 127840008 127840188 -75245344 - MIR SINE MIR -6 256 61 941 284 156 7 chr5 127840419 127840564 -75244968 - L2 LINE L2 -4 3309 3187 4582 112 97 3 chr5 127840564 127841277 -75244255 + LTR17 LTR ERV1 1 780 0 941 284 156 7 chr5 127841277 127841568 -75243964 - L2 LINE L2 -126 3187 2808 708 220 57 23 chr5 127841574 127841751 -75243781 - MER5A DNA MER1_type -2 187 5 * 1299 290 199 22 chr5 127841730 127842507 -75243025 - L2 LINE L2 -492 2822 1908 1208 226 121 21 chr5 127842537 127842869 -75242663 + MER69 DNA AcHobo 1 365 -861 230 351 13 0 chr5 127843652 127843729 -75241803 - MER5A DNA MER1_type -56 133 56 417 270 0 20 chr5 127843784 127843884 -75241648 + MER5A DNA MER1_type 9 106 -83 1797 224 53 2 chr5 127843910 127844423 -75241109 + L1M4 LINE L1 2494 3032 -3114 1409 172 0 0 chr5 127844423 127844650 -75240882 + AluJb SINE Alu 82 308 -4 635 206 201 123 chr5 127844691 127845053 -75240479 + LTR41 LTR ERVL 6 338 -435 1972 139 0 64 chr5 127845053 127845248 -75240284 - AluSx SINE Alu -1 311 144 2362 101 0 7 chr5 127845248 127845556 -75239976 - AluSg SINE Alu -4 306 1 1972 139 0 64 chr5 127845556 127845690 -75239842 - AluSx SINE Alu -168 144 3 635 206 201 123 chr5 127845690 127846034 -75239498 + LTR41 LTR ERVL 338 767 -6 4975 129 56 32 chr5 127847337 127848497 -75237035 - L1PA15 LINE L1 0 6165 4999 2123 103 0 7 chr5 127848597 127848878 -75236654 - AluSg SINE Alu -31 279 1 901 237 81 34 chr5 127849862 127850346 -75235186 - L1ME3A LINE L1 0 6170 5628 30 0 0 0 chr5 127850396 127850426 -75235106 + AT_rich Low_complexity Low_complexity 1 30 0 211 200 0 0 chr5 127851218 127851258 -75234274 + (CA)n Simple_repeat Simple_repeat 1 40 0 244 182 23 0 chr5 127852355 127852399 -75233133 - MER5A DNA MER1_type 0 189 145 1392 234 106 62 chr5 127852415 127853078 -75232454 + L1MEc LINE L1 297 988 -5408 2401 58 0 14 chr5 127853327 127853620 -75231912 - AluY SINE Alu -11 300 12 252 128 0 0 chr5 127854421 127854460 -75231072 + 5S rRNA rRNA 1 39 -82 1215 110 0 0 chr5 127854972 127855155 -75230377 - AluSg/x SINE Alu 0 312 130 2307 91 27 0 chr5 127857871 127858167 -75227365 - AluSg1 SINE Alu -5 304 1 234 0 0 0 chr5 127859028 127859054 -75226478 + (A)n Simple_repeat Simple_repeat 1 26 0 2493 41 0 3 chr5 127859225 127859516 -75226016 - AluY SINE Alu -21 290 1 862 231 30 0 chr5 127859731 127859934 -75225598 - MER3 DNA MER1_type 0 209 1 2411 221 100 3 chr5 127860005 127860717 -75224815 + L1PBa LINE L1 17 797 -6066 574 293 40 8 chr5 127860870 127861123 -75224409 + AluSp SINE Alu 37 297 -16 2481 144 62 46 chr5 127861138 127861208 -75224324 + Tigger3(Golem) DNA MER2_type 2446 2513 -516 1004 256 0 3 chr5 127861208 127861517 -75224015 + AluYb8 SINE Alu 1 308 0 2481 144 62 46 chr5 127861517 127862009 -75223523 + Tigger3(Golem) DNA MER2_type 2513 3017 -12 2428 71 17 0 chr5 127862036 127862330 -75223202 + AluSp SINE Alu 1 299 -14 21 57 0 0 chr5 127863867 127863902 -75221630 + AT_rich Low_complexity Low_complexity 1 35 0 1829 139 37 135 chr5 127864301 127864812 -75220720 + L1MB4 LINE L1 5720 6180 0 576 248 55 0 chr5 127864818 127864927 -75220605 + FLAM_A SINE Alu 2 116 -17 243 0 0 0 chr5 127864940 127864967 -75220565 + (TG)n Simple_repeat Simple_repeat 2 28 0 204 40 0 0 chr5 127864966 127864991 -75220541 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 2053 126 3 35 chr5 127865009 127865326 -75220206 + AluSx SINE Alu 1 307 -5 366 198 42 10 chr5 127865374 127865470 -75220062 - MER94 DNA DNA -35 99 1 30 27 0 0 chr5 127867051 127867088 -75218444 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 127867247 127867269 -75218263 + AT_rich Low_complexity Low_complexity 1 22 0 2122 130 0 0 chr5 127867303 127867595 -75217937 - AluY SINE Alu -19 292 1 21 0 0 0 chr5 127868142 127868163 -75217369 + AT_rich Low_complexity Low_complexity 1 21 0 2249 115 13 43 chr5 127868888 127869262 -75216270 + MLT1B LTR MaLR 28 390 0 240 273 58 29 chr5 127869275 127869414 -75216118 + L1ME LINE L1 5623 5765 -399 2141 109 7 7 chr5 127870864 127871158 -75214374 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 127871235 127871257 -75214275 + AT_rich Low_complexity Low_complexity 1 22 0 280 260 93 33 chr5 127871264 127871414 -75214118 + MIR SINE MIR 78 236 -26 2415 64 0 14 chr5 127871581 127871878 -75213654 - AluY SINE Alu -18 293 1 2328 99 0 7 chr5 127871878 127872180 -75213352 - AluSg SINE Alu -10 300 1 1045 237 84 34 chr5 127873164 127873648 -75211884 - L1ME3A LINE L1 0 6170 5628 30 0 0 0 chr5 127873698 127873728 -75211804 + AT_rich Low_complexity Low_complexity 1 30 0 211 200 0 0 chr5 127874520 127874560 -75210972 + (CA)n Simple_repeat Simple_repeat 1 40 0 247 182 23 0 chr5 127875657 127875701 -75209831 - MER5A DNA MER1_type 0 189 145 1645 234 106 60 chr5 127875717 127876379 -75209153 + L1MEc LINE L1 297 988 -5408 2418 58 0 14 chr5 127876628 127876921 -75208611 - AluY SINE Alu -11 300 12 267 128 0 0 chr5 127877722 127877761 -75207771 + 5S rRNA rRNA 1 39 -82 1216 110 0 0 chr5 127878273 127878456 -75207076 - AluSg/x SINE Alu 0 310 128 2321 91 27 0 chr5 127881171 127881467 -75204065 - AluSg1 SINE Alu -5 304 1 225 0 0 0 chr5 127882328 127882353 -75203179 + (A)n Simple_repeat Simple_repeat 1 25 0 2197 93 3 3 chr5 127882525 127882814 -75202718 - AluSg SINE Alu -21 289 1 245 215 92 0 chr5 127883060 127883125 -75202407 + MIR SINE MIR 121 191 -71 285 363 49 0 chr5 127883165 127883267 -75202265 - MER91A DNA MER1_type 0 196 90 200 252 84 47 chr5 127883210 127883317 -75202215 - L2 LINE L2 -27 3286 3176 * 208 298 117 11 chr5 127883922 127884016 -75201516 + MIR SINE MIR 1 104 -158 529 226 16 0 chr5 127884083 127884207 -75201325 + L1 LINE L1 4771 4896 -1250 240 163 143 0 chr5 127884401 127884450 -75201082 - L1ME3A LINE L1 -88 6082 6027 1151 131 0 6 chr5 127884525 127884701 -75200831 - AluSp SINE Alu -1 312 138 777 238 63 49 chr5 127884774 127884833 -75200699 - L1ME LINE L1 -497 5673 5616 3336 81 20 20 chr5 127884833 127885277 -75200255 - MLT2A1 LTR ERVL 0 444 1 777 238 63 49 chr5 127885277 127885549 -75199983 - L1ME LINE L1 -554 5616 5304 2279 114 0 3 chr5 127886249 127886556 -75198976 - AluSq SINE Alu -3 310 5 1388 183 127 87 chr5 127886738 127887187 -75198345 + MLT1C LTR MaLR 1 467 0 197 309 0 0 chr5 127887634 127887676 -75197856 - L2 LINE L2 -18 3254 3213 238 48 0 48 chr5 127887927 127887969 -75197563 + (TTC)n Simple_repeat Simple_repeat 3 42 0 586 270 160 20 chr5 127887970 127887988 -75197544 + L2 LINE L2 1985 1999 -1315 2557 74 0 0 chr5 127887988 127888297 -75197235 - AluSc SINE Alu 0 309 1 586 270 160 20 chr5 127888297 127888571 -75196961 + L2 LINE L2 1999 2318 -996 * 641 231 169 5 chr5 127888565 127888760 -75196772 + MIR SINE MIR 23 249 -13 334 250 68 0 chr5 127888798 127888886 -75196646 + L2 LINE L2 3179 3272 0 236 84 8 109 chr5 127889355 127889474 -75196058 + (CCCCG)n Simple_repeat Simple_repeat 1 107 0 277 185 20 89 chr5 127889485 127889631 -75195901 + (CCCCG)n Simple_repeat Simple_repeat 1 136 0 243 0 0 0 chr5 127890642 127890669 -75194863 + (A)n Simple_repeat Simple_repeat 1 27 0 2520 41 0 3 chr5 127890840 127891131 -75194401 - AluY SINE Alu -21 290 1 952 231 30 0 chr5 127891346 127891549 -75193983 - MER3 DNA MER1_type 0 209 1 12554 193 65 38 chr5 127891620 127894583 -75190949 + L1PB1 LINE L1 17 2900 -3967 2039 107 50 0 chr5 127894583 127894864 -75190668 - AluSx SINE Alu -17 295 1 12554 193 65 38 chr5 127894864 127895970 -75189562 + L1PB1 LINE L1 2900 3975 -2892 2073 111 0 30 chr5 127895970 127896268 -75189264 + AluSp SINE Alu 1 289 -24 1292 92 0 6 chr5 127896269 127896443 -75189089 + AluSq SINE Alu 132 304 -9 12554 193 65 38 chr5 127896443 127898353 -75187179 + L1PB1 LINE L1 3975 6334 -533 2054 136 0 7 chr5 127898353 127898647 -75186885 + AluSx SINE Alu 1 292 -20 12554 193 65 38 chr5 127898647 127899196 -75186336 + L1PB1 LINE L1 6334 6867 0 1281 106 172 37 chr5 127901311 127901584 -75183948 - MER33 DNA MER1_type -8 316 7 1321 197 17 53 chr5 127901628 127901928 -75183604 + AluJo SINE Alu 1 289 -23 309 274 95 0 chr5 127902277 127902372 -75183160 + L2 LINE L2 3169 3272 0 262 314 8 34 chr5 127902396 127902514 -75183018 - L3 LINE CR1 -8 1569 1455 405 249 130 77 chr5 127902529 127902897 -75182635 + Charlie8 DNA MER1_type 13 367 -2050 354 293 201 51 chr5 127903007 127903321 -75182211 - L3 LINE CR1 -119 1458 1098 217 191 0 0 chr5 127903480 127903522 -75182010 - L2 LINE L2 -3 3310 3269 2299 98 3 0 chr5 127904031 127904326 -75181206 - AluSp SINE Alu -15 298 3 1823 160 105 12 chr5 127905425 127905768 -75179764 - THE1C LTR MaLR 0 375 1 5787 125 11 13 chr5 127905774 127906646 -75178886 - THE1C-int LTR MaLR -6 1574 704 7991 185 112 9 chr5 127906648 127908240 -75177292 + MER52A LTR ERV1 1 1755 0 3457 121 140 61 chr5 127908240 127908891 -75176641 - THE1C-int LTR MaLR -875 705 4 2063 150 68 8 chr5 127908894 127909248 -75176284 - THE1C LTR MaLR 0 375 1 29 0 0 0 chr5 127910190 127910219 -75175313 + GC_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 127910249 127910279 -75175253 + GC_rich Low_complexity Low_complexity 1 30 0 455 288 37 0 chr5 127913322 127913485 -75172047 + L1ME LINE L1 5551 5719 -402 253 198 0 0 chr5 127913504 127913558 -75171974 + L1ME LINE L1 5782 5828 -342 2369 79 0 0 chr5 127913580 127913870 -75171662 + AluSx SINE Alu 7 296 -16 201 178 0 0 chr5 127914620 127914665 -75170867 + (TG)n Simple_repeat Simple_repeat 1 45 0 191 231 108 62 chr5 127914767 127914832 -75170700 - L2 LINE L2 -557 2757 2690 728 181 68 0 chr5 127916165 127916342 -75169190 + MER53 DNA DNA 1 189 0 317 350 8 0 chr5 127916417 127916534 -75168998 - MIR SINE MIR 0 262 145 2175 109 3 10 chr5 127916984 127917295 -75168237 + AluSx SINE Alu 1 309 -3 188 33 0 33 chr5 127919022 127919052 -75166480 + (GA)n Simple_repeat Simple_repeat 2 30 0 518 253 126 0 chr5 127919646 127919820 -75165712 + MER115 DNA AcHobo 240 435 -258 348 161 0 0 chr5 127921981 127922043 -75163489 + A-rich Low_complexity Low_complexity 1 62 0 551 253 55 73 chr5 127923040 127923329 -75162203 - MLT1J LTR MaLR -221 290 7 428 224 43 9 chr5 127923331 127923447 -75162085 + MIR3 SINE MIR 87 206 -2 364 254 31 0 chr5 127924503 127924633 -75160899 - L1MB7 LINE L1 0 6184 6051 1331 250 83 16 chr5 127924639 127925087 -75160445 - L1M4 LINE L1 -1639 4507 4030 590 174 73 84 chr5 127925067 127925342 -75160190 - L1M4 LINE L1 -3143 3003 2732 * 259 215 51 38 chr5 127925347 127925426 -75160106 - MER58A DNA MER1_type -2 222 143 2196 192 20 12 chr5 127925437 127925843 -75159689 - MSTB LTR MaLR -17 409 1 389 224 0 103 chr5 127925842 127925958 -75159574 - MER58A DNA MER1_type 0 145 42 * 1449 252 129 4 chr5 127925960 127926488 -75159044 + L1MC4 LINE L1 5374 5967 -2075 * 2632 173 55 0 chr5 127926129 127926639 -75158893 + L1MB4 LINE L1 5602 6139 -41 449 252 36 9 chr5 127926681 127926792 -75158740 - L1M4 LINE L1 -3407 2739 2626 207 0 0 0 chr5 127926795 127926818 -75158714 + (TC)n Simple_repeat Simple_repeat 2 24 0 1750 146 3 67 chr5 127926818 127927146 -75158386 - AluJo SINE Alu -5 307 1 328 192 20 111 chr5 127927492 127927591 -75157941 - L2 LINE L2 -2 3311 3222 1427 93 0 0 chr5 127928924 127929106 -75156426 - AluSg/x SINE Alu -11 301 120 602 263 94 77 chr5 127930200 127930550 -75154982 + MLT1J LTR MaLR 156 511 0 733 227 40 11 chr5 127930550 127930726 -75154806 + MIR SINE MIR 69 249 -13 563 289 37 31 chr5 127931421 127931655 -75153877 - MIR SINE MIR -1 261 23 313 123 0 26 chr5 127931849 127931913 -75153619 - FRAM/FAM SINE Alu -77 89 41 257 100 350 17 chr5 127933240 127933300 -75152232 + MADE1 DNA Mariner 1 80 0 208 156 22 44 chr5 127933308 127933353 -75152179 + L2 LINE L2 3262 3305 -8 2138 111 71 0 chr5 127933706 127934057 -75151475 - L1MC3 LINE L1 -6 7779 7404 2389 74 0 7 chr5 127934057 127934355 -75151177 - AluSp SINE Alu -17 296 1 221 293 17 0 chr5 127935308 127935366 -75150166 - MER5A DNA MER1_type -6 183 125 1032 133 0 0 chr5 127935367 127935510 -75150022 + FAM SINE Alu 1 143 -42 251 247 11 75 chr5 127935511 127935604 -75149928 - MER5A DNA MER1_type -94 95 9 612 210 66 6 chr5 127937202 127937383 -75148149 + L1PBa LINE L1 6 197 -6666 * 7762 137 54 6 chr5 127937380 127938771 -75146761 + L1PBa LINE L1 1392 2849 -4014 1698 174 14 4 chr5 127938907 127939188 -75146344 + AluJb SINE Alu 1 284 -28 201 282 0 0 chr5 127939400 127939439 -75146093 + L2 LINE L2 350 388 -2926 341 317 54 15 chr5 127939550 127939698 -75145834 + MER5A DNA MER1_type 2 165 -24 3189 243 103 10 chr5 127940038 127941079 -75144453 - L1MEc LINE L1 -4766 1630 493 1160 230 99 41 chr5 127941114 127941479 -75144053 - L1MEc LINE L1 -5974 422 37 446 259 135 53 chr5 127941491 127941884 -75143648 - L1MC5 LINE L1 -187 7774 7414 1243 127 122 0 chr5 127941884 127942089 -75143443 - MER30 DNA MER1_type 0 230 1 446 259 135 53 chr5 127942089 127942487 -75143045 - L1MC5 LINE L1 -547 7414 7050 360 0 0 0 chr5 127942522 127942562 -75142970 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 244 0 0 chr5 127943030 127943075 -75142457 - L3 LINE CR1 -282 1295 1251 278 340 113 0 chr5 127943128 127943234 -75142298 - L3 LINE CR1 -467 1110 993 285 224 179 0 chr5 127943633 127943700 -75141832 + MER115 DNA AcHobo 1 79 -614 574 337 95 26 chr5 127943726 127943990 -75141542 + MER115 DNA AcHobo 152 433 -260 379 218 0 0 chr5 127944375 127944453 -75141079 + Zaphod DNA AcHobo 2809 2886 -1145 356 144 126 54 chr5 127944452 127944563 -75140969 + Zaphod DNA AcHobo 3862 3980 -51 * 862 220 11 11 chr5 127945362 127945548 -75139984 - MER5A DNA MER1_type -3 186 1 529 312 41 18 chr5 127945686 127945949 -75139583 + L1MC/D LINE L1 5434 5713 -449 281 303 37 28 chr5 127946673 127946782 -75138750 + MIR SINE MIR 36 145 -63 314 299 82 27 chr5 127946891 127947075 -75138457 + L1ME3A LINE L1 5537 5730 -391 270 125 83 0 chr5 127947100 127947148 -75138384 - MADE1 DNA Mariner -28 52 1 238 355 39 0 chr5 127947810 127947965 -75137567 - L1ME LINE L1 -383 5738 5578 395 289 76 36 chr5 127948067 127948292 -75137240 - L1ME LINE L1 -1542 4604 4371 291 54 0 0 chr5 127948320 127948357 -75137175 + (TA)n Simple_repeat Simple_repeat 2 38 0 842 174 43 6 chr5 127948382 127948543 -75136989 - L1ME3A LINE L1 -8 6162 5996 499 244 47 16 chr5 127948550 127948677 -75136855 + L1ME3A LINE L1 5883 6013 -157 312 195 85 0 chr5 127948676 127948758 -75136774 - L1ME3A LINE L1 -190 5974 5886 * 739 286 131 56 chr5 127948764 127949906 -75135626 - L1ME LINE L1 -1819 4327 3105 569 244 186 5 chr5 127950917 127951110 -75134422 - MIR SINE MIR -18 244 17 207 0 0 0 chr5 127952748 127952771 -75132761 + (A)n Simple_repeat Simple_repeat 1 23 0 1863 159 3 7 chr5 127954638 127954940 -75130592 + AluJb SINE Alu 1 301 -11 2088 110 11 0 chr5 127956164 127956445 -75129087 - AluSx SINE Alu -28 284 1 2014 143 3 0 chr5 127956446 127956747 -75128785 - AluSx SINE Alu -10 302 1 2083 126 0 7 chr5 127957295 127957589 -75127943 - AluSx SINE Alu -20 292 1 21 0 0 0 chr5 127957884 127957905 -75127627 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 127958509 127958533 -75126999 + AT_rich Low_complexity Low_complexity 1 24 0 259 284 116 26 chr5 127959291 127959446 -75126086 + HAL1 LINE L1 2230 2398 -109 * 275 316 21 0 chr5 127959440 127959535 -75125997 + L1MC4 LINE L1 6903 6999 -1043 224 123 46 15 chr5 127959535 127959600 -75125932 + (TA)n Simple_repeat Simple_repeat 2 68 0 766 239 98 5 chr5 127959695 127959939 -75125593 + L1MC5 LINE L1 6983 7167 -641 4387 191 30 18 chr5 127959946 127961765 -75123767 + L1MB4 LINE L1 4333 6166 -14 823 211 53 41 chr5 127961836 127962154 -75123378 + L1MC5 LINE L1 7589 7910 -51 21 0 0 0 chr5 127963264 127963285 -75122247 + AT_rich Low_complexity Low_complexity 1 21 0 332 336 35 26 chr5 127963360 127963473 -75122059 - MIR SINE MIR -65 143 30 371 44 0 0 chr5 127963639 127963684 -75121848 - L1PA5 LINE L1 -595 5560 5516 4749 54 12 0 chr5 127963684 127964278 -75121254 + L1PA5 LINE L1 5553 6153 -1 1645 190 77 65 chr5 127964385 127964880 -75120652 + MLT1D LTR MaLR 5 505 0 1409 140 155 23 chr5 127965735 127966000 -75119532 + AluJo SINE Alu 1 300 -2 180 250 0 36 chr5 127966446 127966502 -75119030 - MIR3 SINE MIR -9 199 146 2184 104 10 10 chr5 127966798 127967096 -75118436 - AluSx SINE Alu -14 298 1 1252 160 78 0 chr5 127967328 127967547 -75117985 + MER46A DNA MER2_type 1 236 0 36 0 0 0 chr5 127967683 127967719 -75117813 + AT_rich Low_complexity Low_complexity 1 36 0 1498 257 179 9 chr5 127968405 127968942 -75116590 + MLT2E LTR ERVL 1 628 0 211 280 65 32 chr5 127968944 127969037 -75116495 + MIR SINE MIR 154 249 -13 22 35 0 0 chr5 127969185 127969214 -75116318 + AT_rich Low_complexity Low_complexity 1 29 0 235 343 60 18 chr5 127969237 127969403 -75116129 - L2 LINE L2 -930 2384 2212 496 289 76 94 chr5 127969432 127969868 -75115664 - L2 LINE L2 -34 3279 2852 252 272 81 37 chr5 127969914 127970050 -75115482 - L2 LINE L2 -1298 2016 1875 249 321 99 0 chr5 127971242 127971373 -75114159 - MIR SINE MIR -67 195 52 23 33 0 0 chr5 127972204 127972234 -75113298 + AT_rich Low_complexity Low_complexity 1 30 0 3813 218 89 8 chr5 127972897 127973899 -75111633 + Tigger6a DNA MER2_type 1 1083 0 290 204 9 56 chr5 127974390 127974498 -75111034 + A-rich Low_complexity Low_complexity 4 106 0 195 129 0 0 chr5 127974675 127974706 -75110826 + (A)n Simple_repeat Simple_repeat 1 31 0 368 227 76 34 chr5 127974733 127974852 -75110680 + MER58 DNA MER1_type 2 125 -2295 4824 214 126 83 chr5 127974867 127976763 -75108769 + L1MC4a LINE L1 5420 7395 -413 21 36 0 0 chr5 127977322 127977350 -75108182 + AT_rich Low_complexity Low_complexity 1 28 0 1193 122 6 17 chr5 127979440 127979621 -75105911 - FRAM SINE Alu 0 176 1 260 258 72 41 chr5 127979879 127979976 -75105556 + MIR SINE MIR 109 208 -54 1779 145 7 20 chr5 127980194 127980491 -75105041 - AluJb SINE Alu -19 293 1 23 0 0 0 chr5 127982541 127982564 -75102968 + AT_rich Low_complexity Low_complexity 1 23 0 253 273 30 0 chr5 127982879 127982945 -75102587 - MIR SINE MIR -19 243 176 301 255 102 0 chr5 127983052 127983150 -75102382 - MIR3 SINE MIR -44 164 57 2012 125 7 10 chr5 127983829 127984125 -75101407 + AluSx SINE Alu 1 295 -17 253 232 61 37 chr5 127984201 127984283 -75101249 + L1ME LINE L1 5574 5657 -464 279 323 130 7 chr5 127984307 127984583 -75100949 + L1ME LINE L1 5574 5883 -238 1181 227 107 73 chr5 127984718 127985331 -75100201 - MLT1E2 LTR MaLR 0 626 1 2633 52 0 0 chr5 127985331 127985639 -75099893 + AluY SINE Alu 1 308 -3 2089 123 3 3 chr5 127985746 127986039 -75099493 - AluSx SINE Alu -19 293 1 307 291 74 82 chr5 127986529 127986773 -75098759 + MIR SINE MIR 3 244 -18 2266 96 0 13 chr5 127987217 127987519 -75098013 + AluSx SINE Alu 1 298 -14 197 358 49 49 chr5 127987780 127987942 -75097590 - MER5B DNA MER1_type -16 162 1 22 0 0 0 chr5 127988822 127988844 -75096688 + AT_rich Low_complexity Low_complexity 1 22 0 476 311 61 7 chr5 127989469 127989617 -75095915 + MIR3 SINE MIR 44 199 -9 290 311 19 29 chr5 127989877 127989980 -75095552 + MIR SINE MIR 33 134 -128 1859 166 143 61 chr5 127990418 127990913 -75094619 - LTR10A LTR ERV1 -61 548 13 225 211 18 0 chr5 127991046 127991103 -75094429 - L1M3 LINE L1 -736 5432 5375 1439 276 81 8 chr5 127991809 127992448 -75093084 - L1ME3A LINE L1 -9 6153 5451 37 0 0 0 chr5 127992833 127992870 -75092662 + AT_rich Low_complexity Low_complexity 1 37 0 583 224 0 68 chr5 127995265 127995381 -75090151 + MER105 DNA DNA 7 113 -91 1633 138 117 9 chr5 127995381 127995707 -75089825 - MER46B DNA MER2_type 0 236 1 583 224 0 68 chr5 127995707 127995737 -75089795 + MER105 DNA DNA 113 143 -61 262 209 0 70 chr5 127995922 127996008 -75089524 - MIR SINE MIR -10 252 173 278 338 131 19 chr5 127996096 127996256 -75089276 + MIR SINE MIR 2 179 -83 261 366 38 23 chr5 127996879 127997010 -75088522 - MIR3 SINE MIR -32 176 44 308 241 35 69 chr5 127997123 127997239 -75088293 - MER5B DNA MER1_type -66 112 1 952 204 63 0 chr5 127997247 127997453 -75088079 + MER20 DNA MER1_type 1 219 0 2188 98 0 52 chr5 127998381 127998707 -75086825 + AluSq SINE Alu 5 313 0 225 244 0 144 chr5 127999804 127999894 -75085638 + L2 LINE L2 2999 3075 -197 259 284 0 14 chr5 127999928 128000002 -75085530 + MER5A DNA MER1_type 15 87 -102 228 237 13 92 chr5 128000234 128000310 -75085222 - MER5B DNA MER1_type -108 70 1 388 282 60 0 chr5 128000351 128000468 -75085064 - MER5A DNA MER1_type -7 182 59 2342 76 7 3 chr5 128000554 128000857 -75084675 + AluSc SINE Alu 1 304 -5 254 315 65 0 chr5 128002492 128002584 -75082948 - L2 LINE L2 -3 3310 3213 613 166 62 41 chr5 128002600 128002745 -75082787 + MER3 DNA MER1_type 62 209 0 298 256 19 48 chr5 128002757 128002918 -75082614 - L2 LINE L2 -68 3245 3033 25 0 0 0 chr5 128006885 128006910 -75078622 + AT_rich Low_complexity Low_complexity 1 25 0 2307 99 0 0 chr5 128007092 128007384 -75078148 - AluSx SINE Alu -20 292 1 210 37 0 0 chr5 128007883 128007910 -75077622 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1602 160 21 32 chr5 128007913 128008194 -75077338 - AluJo SINE Alu -30 282 5 1942 123 43 13 chr5 128009415 128009715 -75075817 - AluSg SINE Alu -1 309 1 275 152 30 10 chr5 128009769 128009868 -75075664 + (TA)n Simple_repeat Simple_repeat 2 102 0 24 53 0 0 chr5 128009912 128009950 -75075582 + AT_rich Low_complexity Low_complexity 1 38 0 304 268 79 53 chr5 128011417 128011607 -75073925 - L1M4 LINE L1 -3617 2529 2335 268 206 63 0 chr5 128011759 128011822 -75073710 - L2 LINE L2 -98 3215 3149 190 379 103 58 chr5 128011870 128012297 -75073235 + L2 LINE L2 2823 3268 -4 206 255 0 0 chr5 128012624 128012675 -75072857 + T-rich Low_complexity Low_complexity 4 54 0 2319 89 13 7 chr5 128013064 128013367 -75072165 - AluSq SINE Alu -8 305 1 772 250 44 0 chr5 128013502 128013682 -75071850 + MIR SINE MIR 8 195 -67 248 268 70 14 chr5 128014150 128014221 -75071311 - MER5C DNA MER1_type -249 75 1 242 316 52 22 chr5 128014322 128014458 -75071074 - L2 LINE L2 -235 3037 2898 304 278 17 35 chr5 128014533 128014648 -75070884 + L2 LINE L2 2320 2432 -882 725 163 150 6 chr5 128014819 128014979 -75070553 - MER5A DNA MER1_type -2 187 5 924 210 90 5 chr5 128015283 128015483 -75070049 + MER20 DNA MER1_type 3 219 0 2004 141 27 7 chr5 128015888 128016187 -75069345 - AluJb SINE Alu -7 305 1 494 227 61 49 chr5 128016188 128016351 -75069181 + MIR SINE MIR 97 261 -1 505 281 15 22 chr5 128017408 128017543 -75067989 - MIR SINE MIR -105 157 24 186 281 35 35 chr5 128019188 128019245 -75066287 + L2 LINE L2 3167 3223 -90 21 36 0 0 chr5 128020948 128020976 -75064556 + AT_rich Low_complexity Low_complexity 1 28 0 444 286 0 30 chr5 128021279 128021412 -75064120 + MIR SINE MIR 75 203 -59 21 0 0 0 chr5 128021454 128021475 -75064057 + AT_rich Low_complexity Low_complexity 1 21 0 1790 121 57 14 chr5 128021704 128021985 -75063547 - AluJb SINE Alu -19 293 1 2177 128 0 0 chr5 128022170 128022468 -75063064 - AluSx SINE Alu -14 298 1 342 207 143 64 chr5 128022629 128022769 -75062763 + MER117 DNA MER1_type 5 155 -42 1384 229 109 29 chr5 128022905 128023354 -75062178 + L1MC4a LINE L1 5380 5864 -1944 249 266 36 36 chr5 128023573 128023712 -75061820 - L1MC5 LINE L1 -184 7777 7639 268 279 171 28 chr5 128023727 128023978 -75061554 + L1MC4a LINE L1 5880 6166 -1642 1465 112 46 53 chr5 128024282 128024567 -75060965 - L1MA9 LINE L1 -165 6147 5865 1040 141 10 26 chr5 128024582 128024774 -75060758 + L1MA9 LINE L1 6119 6307 -5 315 266 101 28 chr5 128025387 128025496 -75060036 + MIR SINE MIR 33 149 -113 724 309 103 51 chr5 128026314 128027154 -75058378 - L2 LINE L2 -6 3307 2419 3001 164 27 14 chr5 128027189 128027749 -75057783 - L1MB7 LINE L1 -23 6161 5595 1512 166 18 32 chr5 128027778 128028062 -75057470 + AluJo SINE Alu 5 284 -28 584 222 20 13 chr5 128028081 128028234 -75057298 - L1MB7 LINE L1 -841 5305 5152 * 1660 138 62 25 chr5 128028222 128028547 -75056985 - L1M4 LINE L1 -578 6104 5768 1282 164 78 18 chr5 128028558 128028839 -75056693 + LTR54B LTR ERV1 13 310 -188 672 174 45 38 chr5 128028849 128028981 -75056551 - FLAM_A SINE Alu 0 133 1 2188 117 0 0 chr5 128029127 128029425 -75056107 - AluSq SINE Alu -15 298 1 751 99 93 41 chr5 128030599 128030771 -75054761 + LTR54B LTR ERV1 304 484 -14 1228 153 5 19 chr5 128030953 128031162 -75054370 - AluJo SINE Alu -106 206 1 5450 211 44 33 chr5 128031162 128032739 -75052793 - L1M4 LINE L1 -971 5673 4079 4273 218 56 18 chr5 128032745 128034137 -75051395 - L1M4 LINE L1 -4536 2110 656 495 164 26 14 chr5 128034139 128034258 -75051274 - MLT1D LTR MaLR -7 498 261 1765 135 127 36 chr5 128034258 128034644 -75050888 + L1MA7 LINE L1 5869 6289 -2 1297 198 119 16 chr5 128034651 128034954 -75050578 - MLT1D LTR MaLR -118 387 54 1633 183 81 43 chr5 128035402 128035777 -75049755 + MLT1B LTR MaLR 1 589 -1 637 159 190 61 chr5 128036171 128036334 -75049198 - MER20 DNA MER1_type -6 213 30 730 232 25 127 chr5 128036763 128037086 -75048446 - L2 LINE L2 -10 3303 3014 256 257 170 6 chr5 128037240 128037411 -75048121 - MIR SINE MIR -37 225 27 504 278 114 58 chr5 128037574 128038056 -75047476 - L2 LINE L2 -1375 1939 1431 1096 269 117 73 chr5 128038404 128038757 -75046775 - L1MC4a LINE L1 -1536 6272 5936 2173 193 35 9 chr5 128038757 128039212 -75046320 - MLT1C LTR MaLR 0 467 1 1096 269 117 73 chr5 128039212 128039676 -75045856 - L1MC4a LINE L1 -1872 5936 5419 1552 147 94 67 chr5 128039676 128040017 -75045515 + Tigger1 DNA MER2_type 3 352 -2066 * 2209 118 77 6 chr5 128040013 128040378 -75045154 + Tigger1 DNA MER2_type 1954 2344 -74 293 263 72 26 chr5 128040414 128040566 -75044966 - L1MC4a LINE L1 -2388 5420 5262 234 308 94 54 chr5 128040593 128041302 -75044230 - L1MC4a LINE L1 -913 5233 4496 1140 291 82 22 chr5 128041621 128042082 -75043450 - LTR16C LTR ERVL -2 489 1 237 231 46 0 chr5 128042177 128042242 -75043290 - MLT1J LTR MaLR -347 164 97 29 0 0 0 chr5 128044026 128044055 -75041477 + AT_rich Low_complexity Low_complexity 1 29 0 858 304 143 20 chr5 128045722 128046461 -75039071 + L1M4 LINE L1 2745 3574 -2572 1647 160 31 31 chr5 128046477 128046771 -75038761 - AluJo SINE Alu -17 295 2 296 288 159 6 chr5 128046779 128046949 -75038583 + L1P LINE L1 3583 3778 -2368 229 300 22 44 chr5 128047106 128047196 -75038336 + LTR67 LTR ERVL 103 190 -367 432 295 93 43 chr5 128047598 128048103 -75037429 + L1M4 LINE L1 3876 4409 -1737 231 220 20 0 chr5 128048105 128048155 -75037377 + L2 LINE L2 3194 3244 -69 554 302 52 24 chr5 128048381 128048629 -75036903 - HAL1 LINE L1 -809 1698 1444 370 290 236 21 chr5 128049369 128049800 -75035732 + L2 LINE L2 2777 3311 -2 218 331 113 8 chr5 128049821 128049945 -75035587 + L2 LINE L2 3173 3309 -4 21 57 0 0 chr5 128050172 128050207 -75035325 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 128050372 128050392 -75035140 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1901 96 56 11 chr5 128050393 128050722 -75034810 - AluY SINE Alu 0 341 1 330 346 25 110 chr5 128050803 128051248 -75034284 - L2 LINE L2 0 3272 2866 725 321 92 24 chr5 128051927 128052419 -75033113 + LTR67 LTR ERVL 25 549 -8 243 0 0 0 chr5 128053445 128053472 -75032060 + (TA)n Simple_repeat Simple_repeat 1 27 0 243 0 0 0 chr5 128053471 128053498 -75032034 + (GA)n Simple_repeat Simple_repeat 2 28 0 213 262 0 16 chr5 128053966 128054027 -75031505 + (CA)n Simple_repeat Simple_repeat 1 60 0 183 80 0 0 chr5 128054107 128054132 -75031400 + (T)n Simple_repeat Simple_repeat 1 25 0 332 208 88 50 chr5 128054159 128054318 -75031214 - L1MC4a LINE L1 -1841 5967 5803 656 291 77 8 chr5 128055531 128055765 -75029767 + MLT1J1 LTR MaLR 194 443 -3 322 314 41 6 chr5 128055859 128056028 -75029504 + L1ME2 LINE L1 5774 5948 -216 343 281 171 43 chr5 128057008 128057172 -75028360 + MIR SINE MIR 13 197 -65 232 293 10 81 chr5 128057690 128057789 -75027743 + L2 LINE L2 3222 3313 0 817 228 110 79 chr5 128058871 128059400 -75026132 - L2 LINE L2 -94 3219 2667 29 0 0 0 chr5 128059461 128059490 -75026042 + AT_rich Low_complexity Low_complexity 1 29 0 643 323 31 35 chr5 128059969 128060023 -75025509 - MIR SINE MIR 0 262 209 1077 181 17 72 chr5 128060023 128060260 -75025272 - MER58A DNA MER1_type 0 224 1 643 323 31 35 chr5 128060260 128060459 -75025073 - MIR SINE MIR -53 209 10 206 173 308 0 chr5 128060529 128060581 -75024951 + MIR SINE MIR 123 190 -72 21 0 0 0 chr5 128061301 128061322 -75024210 + AT_rich Low_complexity Low_complexity 1 21 0 4045 164 28 36 chr5 128061323 128062051 -75023481 - L1MD2 LINE L1 -20 6339 5617 1251 163 193 48 chr5 128062051 128062425 -75023107 - MSTC LTR MaLR 0 428 1 4045 164 28 36 chr5 128062425 128062493 -75023039 - L1MD2 LINE L1 -742 5617 5550 289 212 0 30 chr5 128063142 128063208 -75022324 - L2 LINE L2 -13 3300 3237 480 213 87 8 chr5 128063337 128063464 -75022068 - MIR SINE MIR -22 240 104 627 247 16 53 chr5 128064489 128064679 -75020853 - LTR1 LTR ERV1 -602 183 1 248 135 0 39 chr5 128065831 128065842 -75019690 + MLT2B3 LTR ERVL 505 515 -39 296 83 21 0 chr5 128065842 128065890 -75019642 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 248 135 0 39 chr5 128065890 128065930 -75019602 + MLT2B3 LTR ERVL 515 554 0 182 387 54 9 chr5 128066910 128067021 -75018511 + L3 LINE CR1 1260 1375 -202 2474 161 50 33 chr5 128067042 128067564 -75017968 - L1MB3 LINE L1 -1 6182 5652 1779 220 86 65 chr5 128067801 128068354 -75017178 + L1MC4 LINE L1 7337 7906 -136 294 29 0 0 chr5 128068354 128068389 -75017143 + (TG)n Simple_repeat Simple_repeat 2 36 0 1779 220 86 65 chr5 128068389 128068477 -75017055 + L1MC4 LINE L1 7906 7991 -51 305 261 87 43 chr5 128068494 128068655 -75016877 + MER52A LTR ERV1 1 168 -1587 * 7776 161 35 1 chr5 128068622 128069880 -75015652 + MER52A LTR ERV1 455 1755 0 22 0 0 0 chr5 128070233 128070255 -75015277 + AT_rich Low_complexity Low_complexity 1 22 0 1437 283 53 38 chr5 128070477 128071225 -75014307 + L1MC4a LINE L1 5254 6015 -106 490 307 74 11 chr5 128071286 128071462 -75014070 + L1ME LINE L1 5482 5668 -453 836 241 60 94 chr5 128071496 128071938 -75013594 + HAL1b LINE L1 629 1052 -296 348 254 77 23 chr5 128071938 128072068 -75013464 + MER91C DNA MER1_type 1 137 -3 836 241 60 94 chr5 128072068 128072157 -75013375 + HAL1b LINE L1 1052 1142 -206 542 313 109 0 chr5 128072182 128072374 -75013158 + MIR SINE MIR 1 213 -49 240 252 47 63 chr5 128073876 128074003 -75011529 - 7SK RNA RNA -68 125 1 2221 115 0 0 chr5 128075702 128075998 -75009534 - AluSx SINE Alu -16 296 1 628 297 42 14 chr5 128076707 128076730 -75008802 - MIR SINE MIR -33 229 208 2184 58 41 21 chr5 128076730 128077021 -75008511 - AluY SINE Alu -14 297 1 628 297 42 14 chr5 128077021 128077209 -75008323 - MIR SINE MIR -54 208 12 1255 244 67 17 chr5 128077994 128078351 -75007181 + LTR16A LTR ERVL 76 450 0 1714 233 146 6 chr5 128078621 128079101 -75006431 + MLT1H LTR MaLR 1 547 -2 26 30 0 0 chr5 128079614 128079647 -75005885 + AT_rich Low_complexity Low_complexity 1 33 0 818 44 0 0 chr5 128080908 128080999 -75004533 + L1PA7 LINE L1 6051 6141 -13 461 239 26 0 chr5 128081560 128081677 -75003855 - MIR SINE MIR -14 248 129 1727 139 106 0 chr5 128081761 128082034 -75003498 + AluSx SINE Alu 1 302 -10 266 358 29 29 chr5 128082413 128082586 -75002946 + L3b LINE CR1 1290 1462 -121 477 316 159 40 chr5 128083369 128083594 -75001938 - L2 LINE L2 0 3272 3075 1562 204 62 60 chr5 128083594 128084059 -75001473 - MER31B LTR ERV1 0 466 1 477 316 159 40 chr5 128084059 128084383 -75001149 - L2 LINE L2 -197 3075 2791 2439 130 32 69 chr5 128084383 128084845 -75000687 - MER65A LTR ERV1 0 445 1 477 316 159 40 chr5 128084845 128085146 -75000386 - L2 LINE L2 -481 2791 2306 235 216 0 0 chr5 128085601 128085652 -74999880 + L1ME LINE L1 5834 5884 -286 254 265 73 0 chr5 128085947 128086015 -74999517 + MLT1F1 LTR MaLR 35 107 -460 2771 201 35 13 chr5 128086016 128086612 -74998920 + L1MD3 LINE L1 7387 7995 0 555 194 0 0 chr5 128088233 128088326 -74997206 - MER20 DNA MER1_type 0 219 127 527 128 11 21 chr5 128088328 128088422 -74997110 + MER53 DNA DNA 1 93 -96 * 749 206 57 23 chr5 128088392 128088567 -74996965 - MER20 DNA MER1_type -38 181 1 225 256 40 80 chr5 128088943 128089068 -74996464 - MIR SINE MIR -6 256 137 196 161 0 0 chr5 128092493 128092524 -74993008 - MIR SINE MIR -117 145 115 235 309 86 26 chr5 128092991 128093143 -74992389 + LTR16C LTR ERVL 328 488 -3 3628 199 104 67 chr5 128093259 128094413 -74991119 - MER52C LTR ERV1 0 1278 1 263 180 0 20 chr5 128094372 128094422 -74991110 + MER52A LTR ERV1 1 49 -1706 * 818 67 19 0 chr5 128094422 128094526 -74991006 - MER52-int LTR ERV1 -8 7083 6978 249 281 15 22 chr5 128094549 128094629 -74990903 - MIR SINE MIR -58 150 70 215 326 136 16 chr5 128094643 128094827 -74990705 - MIR SINE MIR -7 255 50 568 255 92 11 chr5 128094891 128095075 -74990457 + MIR SINE MIR 8 206 -56 4491 139 12 25 chr5 128095096 128095816 -74989716 + MER50 LTR ERV1 1 711 -23 205 214 24 0 chr5 128095904 128095946 -74989586 - MIR SINE MIR -14 248 206 254 239 138 29 chr5 128096245 128096383 -74989149 + L1MC5 LINE L1 7765 7917 -44 298 221 0 13 chr5 128097872 128097949 -74987583 + L1M LINE L1 5348 5423 -2385 5314 139 58 9 chr5 128098016 128098945 -74986587 - L1PA15 LINE L1 -9 6156 5177 8108 78 28 1 chr5 128098945 128100800 -74984732 - L1PA7 LINE L1 0 6154 4278 5314 139 58 9 chr5 128100800 128100977 -74984555 - L1PA15 LINE L1 -988 5177 5010 478 182 52 32 chr5 128100951 128101105 -74984427 - L1 LINE L1 -2977 3169 3013 * 339 271 217 8 chr5 128101109 128101238 -74984294 + L2 LINE L2 2608 2763 -551 435 326 141 10 chr5 128101250 128101633 -74983899 - L1MC4a LINE L1 -1879 5929 5497 386 287 67 54 chr5 128101702 128101925 -74983607 - L1MEd LINE L1 -4916 1203 978 912 191 6 6 chr5 128103296 128103453 -74982079 - FRAM SINE Alu -9 157 1 7249 120 18 3 chr5 128104532 128105915 -74979617 - L1MA2 LINE L1 -8 6296 4894 2188 115 7 7 chr5 128106033 128106338 -74979194 - AluSx SINE Alu -7 305 1 389 227 80 80 chr5 128107100 128107250 -74978282 - MER5B DNA MER1_type -2 176 27 2125 130 50 16 chr5 128107973 128108296 -74977236 + MER1B DNA MER1_type 6 339 0 1993 147 39 22 chr5 128108683 128109038 -74976494 - MLT1A1 LTR MaLR 0 365 5 778 184 174 10 chr5 128109776 128109977 -74975555 + MER7A DNA MER2_type 10 241 -105 23622 27 0 0 chr5 128110045 128113473 -74972059 + L1PA2 LINE L1 2728 6155 0 213 132 0 0 chr5 128114577 128114615 -74970917 + (TG)n Simple_repeat Simple_repeat 1 38 0 342 303 74 0 chr5 128116157 128116279 -74969253 - Charlie8 DNA MER1_type -2279 138 8 1294 245 178 28 chr5 128117742 128118252 -74967280 + MLT1K LTR MaLR 2 588 0 297 282 0 12 chr5 128119026 128119111 -74966421 + G-rich Low_complexity Low_complexity 3 86 0 1265 232 89 76 chr5 128119424 128119898 -74965634 - MLT1J LTR MaLR 0 511 32 935 219 130 23 chr5 128120196 128120588 -74964944 - L1MC5 LINE L1 -82 7879 7446 230 257 68 0 chr5 128120678 128120752 -74964780 + L2 LINE L2 2563 2641 -673 230 246 0 14 chr5 128120835 128120904 -74964628 - MARNA DNA Mariner -350 236 169 223 260 0 82 chr5 128122404 128122477 -74963055 - MIR3 SINE MIR -1 207 141 1074 187 23 47 chr5 128123282 128123496 -74962036 + MER63A DNA MER1_type 1 209 -1 23 0 0 0 chr5 128123619 128123642 -74961890 + AT_rich Low_complexity Low_complexity 1 23 0 303 281 47 31 chr5 128123903 128124031 -74961501 + MIR SINE MIR 132 261 -1 21 0 0 0 chr5 128125043 128125064 -74960468 + AT_rich Low_complexity Low_complexity 1 21 0 225 253 48 12 chr5 128125320 128125403 -74960129 + L1MC/D LINE L1 5625 5710 -2098 267 266 0 0 chr5 128125597 128125676 -74959856 + (TA)n Simple_repeat Simple_repeat 1 79 0 11020 148 13 1 chr5 128125922 128127568 -74957964 + HUERS-P3 LTR ERV1 7253 8918 -1 1089 95 137 6 chr5 128127572 128127740 -74957792 + LTR9B LTR ERV1 5 194 -450 334 143 20 0 chr5 128127738 128127787 -74957745 + LTR9B LTR ERV1 131 180 -464 * 1088 221 46 5 chr5 128128030 128128388 -74957144 + MER67C LTR ERV1 220 648 -62 2787 123 0 10 chr5 128128410 128128817 -74956715 + LTR9B LTR ERV1 170 572 -72 5097 103 20 3 chr5 128128937 128129654 -74955878 + L1PA16 LINE L1 5452 6180 0 21 0 0 0 chr5 128129882 128129903 -74955629 + AT_rich Low_complexity Low_complexity 1 21 0 1524 228 53 72 chr5 128129920 128130433 -74955099 - L1MDa LINE L1 -3008 3532 3030 2412 179 68 31 chr5 128130437 128131175 -74954357 - L1MDa LINE L1 -3670 2870 2109 574 171 31 23 chr5 128131184 128131313 -74954219 - L1MA4 LINE L1 -2 6298 6169 5234 218 109 16 chr5 128131316 128131515 -74954017 - L1MDa LINE L1 -5077 1463 1284 2299 88 7 0 chr5 128131515 128131811 -74953721 - AluSp SINE Alu -13 300 3 5234 218 109 16 chr5 128131811 128132950 -74952582 - L1MDa LINE L1 -5256 1284 1 183 80 0 0 chr5 128133419 128133444 -74952088 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 607 271 166 0 chr5 128134172 128134371 -74951161 + MIR SINE MIR 11 242 -20 602 272 27 38 chr5 128136061 128136245 -74949287 + MER5A DNA MER1_type 1 182 -7 439 301 171 10 chr5 128136823 128137022 -74948510 - MIR SINE MIR -6 256 26 1749 179 69 23 chr5 128137596 128137943 -74947589 - MLT1A1 LTR MaLR -2 363 1 915 204 30 71 chr5 128137945 128138214 -74947318 + LTR40b LTR ERVL 205 462 0 369 274 26 59 chr5 128138248 128138401 -74947131 - MIR SINE MIR -5 257 110 296 261 121 48 chr5 128139161 128139406 -74946126 + MLT1K LTR MaLR 341 611 -4 2526 137 7 7 chr5 128140152 128140578 -74944954 - Tigger2 DNA MER2_type -1 2717 3 282 289 21 21 chr5 128140612 128140709 -74944823 - MIR3 SINE MIR -3 205 109 317 266 21 0 chr5 128140737 128140831 -74944701 - MARNA DNA Mariner -208 378 283 1183 273 40 24 chr5 128141083 128141538 -74943994 - L1MCc LINE L1 -3301 3640 3179 572 202 58 46 chr5 128142158 128142241 -74943291 - LTR41 LTR ERVL -595 178 97 922 188 0 24 chr5 128142241 128142411 -74943121 + L1PA8 LINE L1 6005 6170 -2 572 202 58 46 chr5 128142411 128142500 -74943032 - LTR41 LTR ERVL -676 97 4 655 201 28 0 chr5 128142500 128142644 -74942888 - L1MCc LINE L1 -3778 3163 3016 358 266 42 58 chr5 128142656 128142897 -74942635 - L1MCc LINE L1 -4136 2986 2750 3543 188 37 54 chr5 128142908 128143643 -74941889 + MER44D DNA MER2_type 1 594 -11 924 146 0 0 chr5 128143812 128143942 -74941590 - AluSq/x SINE Alu -182 130 1 1136 280 87 48 chr5 128144036 128145013 -74940519 - L1MCc LINE L1 -4614 2508 1280 1344 273 85 45 chr5 128145055 128145497 -74940035 - L2 LINE L2 -35 3278 2789 4083 171 37 61 chr5 128145497 128146490 -74939042 + LTR5 LTR ERVK 1 969 0 1344 273 85 45 chr5 128146490 128146814 -74938718 - L2 LINE L2 -524 2789 2479 371 224 92 0 chr5 128146824 128146922 -74938610 + MER69A DNA AcHobo 26 132 -45 217 311 41 25 chr5 128146973 128147095 -74938437 - L2 LINE L2 -823 2491 2368 1595 176 43 0 chr5 128147686 128147965 -74937567 + AluSq SINE Alu 5 295 -18 185 185 130 0 chr5 128148767 128148821 -74936711 + L2 LINE L2 2016 2076 -1238 386 231 8 0 chr5 128149656 128149702 -74935830 + (TA)n Simple_repeat Simple_repeat 2 46 -86 2652 132 54 10 chr5 128149702 128150112 -74935420 - MSTA LTR MaLR 0 428 1 386 231 8 0 chr5 128150112 128150195 -74935337 + (TA)n Simple_repeat Simple_repeat 46 132 0 32 43 0 0 chr5 128150225 128150271 -74935261 + AT_rich Low_complexity Low_complexity 1 46 0 417 39 0 0 chr5 128150306 128150357 -74935175 + (TG)n Simple_repeat Simple_repeat 2 52 0 675 112 5 220 chr5 128150471 128150685 -74934847 + MER105 DNA DNA 1 168 -36 200 167 95 0 chr5 128151235 128151277 -74934255 - L2 LINE L2 -3 3310 3265 2085 129 3 7 chr5 128151378 128151680 -74933852 - AluSx SINE Alu -11 301 1 968 285 68 74 chr5 128151752 128152211 -74933321 + MLT1K LTR MaLR 133 588 0 2505 134 34 46 chr5 128152471 128153037 -74932495 - MER4E LTR ERV1 -3 763 27 1863 216 37 61 chr5 128153037 128153547 -74931985 - LTR1B LTR ERV1 0 826 329 748 251 16 11 chr5 128153551 128153734 -74931798 - LTR1 LTR ERV1 -601 184 1 598 266 78 102 chr5 128154646 128155194 -74930338 + MLT1H LTR MaLR 14 548 -1 476 208 64 0 chr5 128155216 128155341 -74930191 - LTR67 LTR ERVL -25 532 400 1926 155 7 0 chr5 128155456 128155765 -74929767 + MER47A DNA MER2_type 56 366 0 2146 112 3 3 chr5 128156358 128156663 -74928869 + AluSq SINE Alu 9 313 0 226 239 80 34 chr5 128156757 128156845 -74928687 - MIR SINE MIR -63 145 54 5365 109 41 9 chr5 128157005 128157760 -74927772 + MER4E LTR ERV1 1 779 0 1032 119 9 110 chr5 128157779 128157997 -74927535 + MER4B LTR ERV1 1 196 -414 2455 48 0 0 chr5 128158010 128158302 -74927230 - LTR17 LTR ERV1 -454 326 35 2887 104 12 25 chr5 128158302 128158733 -74926799 + MER4B LTR ERV1 186 610 0 647 212 41 14 chr5 128159552 128159698 -74925834 - MER5A DNA MER1_type 0 189 40 2750 132 39 13 chr5 128159708 128160169 -74925363 - Tigger1 DNA MER2_type 0 2418 1946 786 69 0 10 chr5 128160166 128160268 -74925264 - Tigger1 DNA MER2_type -1046 1372 1272 * 3704 163 22 34 chr5 128160259 128160932 -74924600 - Tigger1 DNA MER2_type -1744 674 10 2212 116 0 3 chr5 128161345 128161639 -74923893 + AluSc SINE Alu 1 293 -16 685 258 55 109 chr5 128161685 128162227 -74923305 - L1MC5 LINE L1 -177 7784 7272 592 238 0 8 chr5 128162732 128162854 -74922678 - LTR28 LTR ERV1 0 1020 900 434 248 35 9 chr5 128162912 128163025 -74922507 - LTR28 LTR ERV1 -56 964 849 * 792 234 29 6 chr5 128163024 128163199 -74922333 - LTR28 LTR ERV1 -410 610 432 328 306 65 0 chr5 128163765 128163933 -74921599 + Charlie8 DNA MER1_type 106 1390 -1027 345 149 2 2 chr5 128164015 128164077 -74921455 - MLT2B2 LTR ERVL 0 515 336 200 214 18 0 chr5 128164077 128164133 -74921399 + (TA)n Simple_repeat Simple_repeat 1 57 0 684 216 180 0 chr5 128164155 128164322 -74921210 - MLT2C2 LTR ERVL -49 415 219 7444 25 1 2 chr5 128164322 128165148 -74920384 + L1PA2 LINE L1 5331 6155 0 216 111 0 0 chr5 128166252 128166288 -74919244 + (TG)n Simple_repeat Simple_repeat 1 36 0 20493 78 3 3 chr5 128167291 128171114 -74914418 + L1P LINE L1 12 3836 -2310 23541 42 4 36 chr5 128171221 128174538 -74910994 - L1P1 LINE L1 -573 5582 2378 238 216 0 0 chr5 128174713 128174764 -74910768 + T-rich Low_complexity Low_complexity 1 51 0 225 211 0 19 chr5 128174765 128174817 -74910715 + GA-rich Low_complexity Low_complexity 2 52 0 1294 245 178 28 chr5 128175702 128176212 -74909320 + MLT1K LTR MaLR 2 588 0 297 282 0 12 chr5 128176986 128177071 -74908461 + G-rich Low_complexity Low_complexity 3 86 0 1265 232 89 76 chr5 128177385 128177859 -74907673 - MLT1J LTR MaLR 0 511 32 898 217 142 14 chr5 128178157 128178517 -74907015 - L1MC5 LINE L1 -82 7879 7474 24 53 0 0 chr5 128178517 128178555 -74906977 + AT_rich Low_complexity Low_complexity 1 38 0 300 53 0 0 chr5 128178977 128179015 -74906517 + (T)n Simple_repeat Simple_repeat 1 38 0 4010 20 0 0 chr5 128179017 128179469 -74906063 - L1HS LINE L1 -2 6153 5702 3174 11 0 0 chr5 128179467 128179894 -74905638 + L1P1 LINE L1 5181 5607 -548 * 230 257 68 0 chr5 128180029 128180103 -74905429 + L2 LINE L2 2563 2641 -673 230 246 0 14 chr5 128180186 128180255 -74905277 - MARNA DNA Mariner -350 236 169 223 260 0 82 chr5 128181755 128181828 -74903704 - MIR3 SINE MIR -1 207 141 1074 187 23 47 chr5 128182630 128182844 -74902688 + MER63A DNA MER1_type 1 209 -1 23 0 0 0 chr5 128182967 128182990 -74902542 + AT_rich Low_complexity Low_complexity 1 23 0 303 281 47 31 chr5 128183251 128183379 -74902153 + MIR SINE MIR 132 261 -1 402 115 0 0 chr5 128184017 128184078 -74901454 + (TA)n Simple_repeat Simple_repeat 2 62 0 234 0 0 0 chr5 128184078 128184104 -74901428 + (CA)n Simple_repeat Simple_repeat 1 26 0 241 226 32 0 chr5 128184104 128184166 -74901366 - MIR SINE MIR -80 128 65 321 286 75 41 chr5 128184504 128184651 -74900881 - MIR3 SINE MIR -25 183 32 289 208 97 0 chr5 128185031 128185103 -74900429 - MARNA DNA Mariner -145 441 363 1867 141 106 29 chr5 128185391 128185739 -74899793 + THE1C LTR MaLR 1 375 0 703 266 23 0 chr5 128186134 128186307 -74899225 + MER69A DNA AcHobo 1 177 0 222 118 0 0 chr5 128186479 128186513 -74899019 + (CA)n Simple_repeat Simple_repeat 2 35 0 461 170 182 44 chr5 128189324 128189483 -74896049 - L1ME4a LINE L1 -95 6026 5846 307 331 74 14 chr5 128189806 128189954 -74895578 + LTR16C LTR ERVL 170 326 -165 500 209 11 126 chr5 128191559 128191750 -74893782 - MLT1K LTR MaLR -8 580 412 411 276 147 49 chr5 128192548 128192559 -74892973 + MIR3 SINE MIR 19 28 -180 1531 186 11 0 chr5 128192559 128192823 -74892709 + AluJo SINE Alu 36 302 -10 411 276 147 49 chr5 128192823 128192974 -74892558 + MIR3 SINE MIR 28 197 -11 809 202 17 28 chr5 128192989 128193167 -74892365 + MER5B DNA MER1_type 2 177 -1 328 306 65 0 chr5 128194532 128194700 -74890832 + Charlie8 DNA MER1_type 106 1379 -1038 345 149 2 2 chr5 128194782 128194844 -74890688 - MLT2B2 LTR ERVL 0 515 336 200 214 18 0 chr5 128194844 128194900 -74890632 + (TA)n Simple_repeat Simple_repeat 2 58 0 802 169 108 154 chr5 128194922 128195089 -74890443 - MLT2C2 LTR ERVL -49 415 242 7419 29 1 1 chr5 128195089 128195910 -74889622 + L1PA3 LINE L1 5331 6151 -4 198 0 0 0 chr5 128195917 128195939 -74889593 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 802 169 108 154 chr5 128195939 128196042 -74889490 - MLT2C2 LTR ERVL -228 236 150 1484 211 41 21 chr5 128196047 128196442 -74889090 - MER54B LTR ERVL 0 793 484 637 105 36 2 chr5 128196533 128196756 -74888776 + AluSx SINE Alu 1 285 -25 344 247 0 21 chr5 128196955 128197052 -74888480 - MLT2C2 LTR ERVL -321 143 49 5077 241 47 8 chr5 128197052 128198511 -74887021 - L1M1 LINE L1 -4171 3038 1731 1368 293 69 59 chr5 128198564 128199301 -74886231 - L1M1 LINE L1 -6133 1076 200 25588 90 6 21 chr5 128199605 128203221 -74882311 + L1PA5 LINE L1 4 3566 -2580 878 48 0 0 chr5 128203214 128203317 -74882215 + L1P LINE L1 4154 4256 -1890 * 15415 54 2 3 chr5 128203317 128205913 -74879619 + L1PA5 LINE L1 3562 6154 0 3815 194 31 50 chr5 128206084 128207071 -74878461 + LTR5 LTR ERVK 1 969 0 203 161 0 0 chr5 128207094 128207125 -74878407 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 949 236 83 43 chr5 128207834 128208161 -74877371 + MER102b DNA MER1_type 2 341 0 315 0 0 0 chr5 128209221 128209256 -74876276 + (TG)n Simple_repeat Simple_repeat 1 35 0 1485 267 88 21 chr5 128211745 128212367 -74873165 - L1MC4a LINE L1 -1632 6176 5513 232 281 174 8 chr5 128212700 128212821 -74872711 + MIR3 SINE MIR 3 143 -65 575 233 104 0 chr5 128214063 128214226 -74871306 - MIR SINE MIR -6 256 77 318 252 36 18 chr5 128215526 128215637 -74869895 + MLT1L LTR MaLR 188 300 -315 309 274 140 38 chr5 128215673 128215859 -74869673 - MLT1K LTR MaLR -62 526 322 1523 176 27 10 chr5 128215884 128216179 -74869353 + MSTB LTR MaLR 1 300 -126 927 310 137 22 chr5 128216459 128217052 -74868480 - L2 LINE L2 -506 2808 2148 322 272 105 113 chr5 128217057 128217439 -74868093 + L2 LINE L2 2842 3220 -52 351 268 123 39 chr5 128218463 128218642 -74866890 + MIR SINE MIR 56 249 -13 498 154 0 0 chr5 128218643 128218721 -74866811 - MER116 DNA Mariner 0 80 3 661 271 85 0 chr5 128218933 128219132 -74866400 + MIR SINE MIR 1 216 -46 344 254 66 80 chr5 128219776 128220063 -74865469 + HAL1 LINE L1 91 373 -2134 3717 125 16 26 chr5 128220261 128220908 -74864624 + L1MA4 LINE L1 5344 5983 -317 371 21 0 0 chr5 128221000 128221048 -74864484 + L1PA3 LINE L1 6105 6152 -3 436 161 0 0 chr5 128221105 128221186 -74864346 + AluJ/FRAM SINE Alu 232 312 0 454 319 12 16 chr5 128221377 128221634 -74863898 + HAL1 LINE L1 1449 1704 -803 826 215 6 0 chr5 128221991 128222168 -74863364 + MER5B DNA MER1_type 1 178 0 527 315 129 56 chr5 128222210 128222692 -74862840 + L1MC4a LINE L1 610 1126 -5079 680 232 26 0 chr5 128222734 128222885 -74862647 - MER58A DNA MER1_type -28 196 42 250 258 16 23 chr5 128222985 128223113 -74862419 + L1MC4a LINE L1 1269 1395 -5001 5247 116 55 0 chr5 128223226 128224345 -74861187 + L1PA16 LINE L1 5002 6166 0 379 339 34 4 chr5 128224379 128224615 -74860917 + L1MC4a LINE L1 1578 1820 -4576 312 256 63 79 chr5 128224757 128225136 -74860396 + L1MC4a LINE L1 2030 2402 -3994 286 238 0 12 chr5 128225154 128225234 -74860298 + HAL1 LINE L1 1692 1770 -737 546 285 80 44 chr5 128225392 128225869 -74859663 + HAL1 LINE L1 2014 2507 0 343 303 94 53 chr5 128226027 128226468 -74859064 + L1MC4a LINE L1 4844 5150 -1065 396 40 0 0 chr5 128227037 128227087 -74858445 + (A)n Simple_repeat Simple_repeat 1 50 0 1917 147 7 0 chr5 128228047 128228332 -74857200 + AluSx SINE Alu 1 287 -25 432 227 136 65 chr5 128229727 128229881 -74855651 + MIR3 SINE MIR 32 196 -12 368 220 78 73 chr5 128229892 128230083 -74855449 + MIR SINE MIR 65 256 -6 466 211 32 0 chr5 128231061 128231184 -74854348 - L1ME2 LINE L1 -10 6154 6028 238 319 106 26 chr5 128231326 128231439 -74854093 - MIR3 SINE MIR -33 175 54 218 317 61 0 chr5 128231438 128231520 -74854012 - MIR SINE MIR -6 256 170 * 260 258 15 15 chr5 128231517 128231583 -74853949 + MIR SINE MIR 157 222 -40 1181 248 46 44 chr5 128231897 128232372 -74853160 - MLT1K LTR MaLR 0 476 1 215 309 15 0 chr5 128232549 128232617 -74852915 - MER5A DNA MER1_type -7 182 114 * 262 224 26 13 chr5 128232566 128232642 -74852890 + MER5A DNA MER1_type 36 112 -77 766 175 70 147 chr5 128232649 128232963 -74852569 - MER21B LTR ERV1 -553 310 21 291 319 88 9 chr5 128233001 128233114 -74852418 - MIR3 SINE MIR -33 175 54 198 0 0 0 chr5 128234360 128234382 -74851150 + (A)n Simple_repeat Simple_repeat 1 22 0 336 288 168 0 chr5 128234386 128234511 -74851021 + MIR3 SINE MIR 52 197 -11 771 279 160 17 chr5 128234526 128234996 -74850536 - L3 LINE CR1 -49 1528 992 182 321 18 0 chr5 128235762 128235818 -74849714 - MER5A DNA MER1_type -124 65 9 5759 104 23 0 chr5 128236504 128236862 -74848670 - L1PB1 LINE L1 0 6151 5803 237 33 0 0 chr5 128236862 128236892 -74848640 + (TG)n Simple_repeat Simple_repeat 2 31 0 5759 104 23 0 chr5 128236892 128237768 -74847764 - L1PB1 LINE L1 -348 5803 4913 476 99 12 0 chr5 128239115 128239196 -74846336 - L1MB4 LINE L1 -6 6174 6093 299 358 80 0 chr5 128239477 128239614 -74845918 + MIR SINE MIR 53 200 -62 190 191 21 21 chr5 128239735 128239782 -74845750 + L2 LINE L2 3266 3312 -1 367 283 70 41 chr5 128239966 128240280 -74845252 + L1ME4a LINE L1 5546 5868 -253 5993 135 66 10 chr5 128240331 128240828 -74844704 + Tigger3b DNA MER2_type 3 470 -2558 378 0 0 0 chr5 128240828 128240870 -74844662 + (TG)n Simple_repeat Simple_repeat 2 43 0 5993 135 66 10 chr5 128240870 128241487 -74844045 + Tigger3b DNA MER2_type 470 1180 -51 244 188 12 12 chr5 128242418 128242498 -74843034 + T-rich Low_complexity Low_complexity 1 80 0 4387 156 43 5 chr5 128242499 128243357 -74842175 - L1 LINE L1 -845 5301 4411 2272 102 0 3 chr5 128243357 128243650 -74841882 - AluSx SINE Alu -10 302 11 232 315 62 34 chr5 128243663 128243809 -74841723 - MLT1K LTR MaLR -304 284 135 186 313 107 27 chr5 128244098 128244248 -74841284 - L2 LINE L2 -225 3047 2886 281 228 142 94 chr5 128244883 128245010 -74840522 + MIR SINE MIR 20 152 -110 789 268 41 9 chr5 128245045 128245265 -74840267 + MIR SINE MIR 35 261 -1 1404 241 48 19 chr5 128245293 128245712 -74839820 - MLT1L LTR MaLR -4 611 181 313 238 168 30 chr5 128245927 128246028 -74839504 + MIR SINE MIR 22 136 -126 371 214 153 0 chr5 128246343 128246441 -74839091 + MIR SINE MIR 88 200 -62 24 0 0 0 chr5 128246957 128246981 -74838551 + AT_rich Low_complexity Low_complexity 1 24 0 294 295 132 31 chr5 128247083 128247212 -74838320 - L2 LINE L2 -9 3263 3122 362 224 84 14 chr5 128248163 128248306 -74837226 - LTR67 LTR ERVL 0 557 405 227 241 19 0 chr5 128248340 128248394 -74837138 - MER115 DNA AcHobo 0 693 639 371 237 0 82 chr5 128248592 128248689 -74836843 - MER115 DNA AcHobo -474 219 131 687 129 129 0 chr5 128249099 128249215 -74836317 - FLAM_C SINE Alu 0 133 3 1700 167 98 0 chr5 128249495 128249812 -74835720 + MER7A DNA MER2_type 1 346 0 973 213 122 60 chr5 128250058 128250410 -74835122 - MLT1A2 LTR MaLR 0 374 1 422 252 19 0 chr5 128252118 128252225 -74833307 - MIR SINE MIR -29 233 125 216 158 0 0 chr5 128253173 128253211 -74832321 + A-rich Low_complexity Low_complexity 1 38 0 696 311 7 47 chr5 128253954 128254231 -74831301 + L2 LINE L2 3048 3313 0 830 239 78 5 chr5 128254342 128254547 -74830985 - MER58A DNA MER1_type -3 221 2 2037 148 12 3 chr5 128256716 128257060 -74828472 - MLT1A1 LTR MaLR 0 365 19 5706 133 31 19 chr5 128257243 128258707 -74826825 - L1MA6 LINE L1 -6 6294 4808 254 255 330 0 chr5 128259634 128259728 -74825804 + L3 LINE CR1 1429 1553 -24 222 37 0 0 chr5 128259769 128259796 -74825736 + (T)n Simple_repeat Simple_repeat 1 27 0 1299 185 10 102 chr5 128259878 128260272 -74825260 + MLT2D LTR ERVL 1 358 -56 723 231 108 79 chr5 128260435 128260751 -74824781 + L2 LINE L2 2821 3145 -168 343 191 54 68 chr5 128262259 128262406 -74823126 - LTR67 LTR ERVL 0 557 413 1934 170 85 5 chr5 128263229 128263605 -74821927 - MSTB LTR MaLR 0 426 21 28 29 0 0 chr5 128263746 128263781 -74821751 + AT_rich Low_complexity Low_complexity 1 35 0 732 301 138 14 chr5 128263946 128264697 -74820835 + L2 LINE L2 2462 3309 -4 399 315 91 17 chr5 128265156 128265388 -74820144 + MIR SINE MIR 8 256 -6 1790 193 0 3 chr5 128266091 128266392 -74819140 - AluJo SINE Alu -12 300 1 2296 67 0 41 chr5 128266542 128266857 -74818675 + AluY SINE Alu 1 302 -9 457 299 104 0 chr5 128266858 128267012 -74818520 - MIR SINE MIR -30 232 63 189 221 0 0 chr5 128267742 128267810 -74817722 + (TA)n Simple_repeat Simple_repeat 2 69 0 648 351 64 48 chr5 128268474 128269033 -74816499 + L1MEd LINE L1 23 590 -5529 334 278 88 37 chr5 128269397 128269812 -74815720 + L1MEd LINE L1 1016 1552 -938 1651 194 63 65 chr5 128272039 128272498 -74813034 - MLT1C LTR MaLR -4 463 6 195 306 204 0 chr5 128273590 128273698 -74811834 + L2 LINE L2 3136 3265 -7 29 53 0 40 chr5 128273970 128274046 -74811486 + AT_rich Low_complexity Low_complexity 1 73 0 1333 133 113 0 chr5 128274177 128274417 -74811115 + AluJo SINE Alu 42 308 -4 3463 208 178 74 chr5 128274658 128275421 -74810111 + L1MC3 LINE L1 6255 6937 -848 347 207 37 12 chr5 128275421 128275503 -74810029 + MLT1F1 LTR MaLR 41 124 -443 3463 208 178 74 chr5 128275503 128276023 -74809509 + L1MC3 LINE L1 6937 7761 -24 26 64 0 0 chr5 128276087 128276134 -74809398 + AT_rich Low_complexity Low_complexity 1 47 0 519 175 0 0 chr5 128276184 128276264 -74809268 + Tigger3b DNA MER2_type 23 102 -1129 * 3942 147 123 22 chr5 128276263 128277127 -74808405 + Tigger3b DNA MER2_type 275 1225 -6 381 167 0 0 chr5 128281347 128281425 -74804107 + GA-rich Low_complexity Low_complexity 1 78 0 229 214 86 14 chr5 128284390 128284445 -74801087 + MIR3 SINE MIR 95 157 -51 900 144 0 0 chr5 128284445 128284577 -74800955 - FLAM_C SINE Alu -1 132 1 229 214 86 14 chr5 128284577 128284591 -74800941 + MIR3 SINE MIR 157 169 -39 1876 215 67 54 chr5 128285108 128285661 -74799871 + MER68 LTR ERV1 3 562 0 2401 100 0 0 chr5 128286137 128286438 -74799094 + AluSc SINE Alu 1 301 -8 645 253 148 67 chr5 128287321 128288493 -74797039 + L1MEc LINE L1 1056 2323 -4073 1255 272 73 20 chr5 128288499 128289238 -74796294 + L1MEc LINE L1 2243 3020 -3195 1215 223 72 9 chr5 128289954 128290272 -74795260 - MER58B DNA MER1_type 0 341 4 196 342 118 13 chr5 128290375 128290527 -74795005 + L2 LINE L2 2902 3069 -203 284 244 122 18 chr5 128291272 128291466 -74794066 + L1ME1 LINE L1 5944 6165 -1 188 281 53 0 chr5 128293169 128293226 -74792306 - MER5A DNA MER1_type -2 187 128 3700 161 78 57 chr5 128293679 128294655 -74790877 + L1MB8 LINE L1 5181 6177 -1 26 0 0 0 chr5 128294658 128294684 -74790848 + AT_rich Low_complexity Low_complexity 1 26 0 231 307 80 12 chr5 128296457 128296620 -74788912 + L1MC5 LINE L1 7744 7917 -44 390 311 34 68 chr5 128298069 128298246 -74787286 + L2 LINE L2 3102 3272 0 254 264 0 0 chr5 128299486 128299558 -74785974 + L1ME LINE L1 5691 5762 -400 856 263 71 27 chr5 128299878 128300175 -74785357 + L1MC4a LINE L1 5552 5861 -1947 382 291 81 104 chr5 128302668 128303262 -74782270 + L1M2 LINE L1 799 1378 -5471 215 170 38 0 chr5 128303291 128303344 -74782188 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 1750 137 61 47 chr5 128303538 128303880 -74781652 - THE1B LTR MaLR 0 364 18 1189 176 137 19 chr5 128305026 128305134 -74780398 + AluJb SINE Alu 9 103 -209 291 114 0 0 chr5 128305134 128305178 -74780354 + (CA)n Simple_repeat Simple_repeat 1 44 0 1189 176 137 19 chr5 128305178 128305331 -74780201 + AluJb SINE Alu 103 301 -11 417 267 117 28 chr5 128305335 128305515 -74780017 + Charlie2 DNA MER1_type 88 283 -2499 1841 178 169 104 chr5 128305562 128305736 -74779796 + Charlie2 DNA MER1_type 1859 2020 -842 1774 168 3 13 chr5 128305736 128306034 -74779498 - AluJb SINE Alu -17 295 1 1841 178 169 104 chr5 128306034 128306384 -74779148 + Charlie2 DNA MER1_type 2020 2346 -516 2157 105 0 10 chr5 128306384 128306680 -74778852 - AluSq SINE Alu -20 293 1 1841 178 169 104 chr5 128306680 128306736 -74778796 + Charlie2 DNA MER1_type 2346 2397 -465 1937 170 0 0 chr5 128306736 128307036 -74778496 + AluJb SINE Alu 1 300 -12 1841 178 169 104 chr5 128307036 128307391 -74778141 + Charlie2 DNA MER1_type 2397 2857 -5 230 73 24 0 chr5 128307589 128307630 -74777902 + (GTTTG)n Simple_repeat Simple_repeat 3 44 0 245 301 142 0 chr5 128308063 128308176 -74777356 - L1ME LINE L1 -460 5661 5533 1767 172 0 0 chr5 128308731 128309021 -74776511 + AluJb SINE Alu 22 311 -1 281 376 153 16 chr5 128309030 128309344 -74776188 - L2 LINE L2 -12 3260 2904 244 294 46 55 chr5 128311632 128311741 -74773791 - L2 LINE L2 -2 3311 3204 221 322 92 66 chr5 128311781 128312008 -74773524 - L2 LINE L2 -223 3049 2817 1528 165 46 0 chr5 128312605 128312866 -74772666 + AluJb SINE Alu 40 312 0 340 350 7 15 chr5 128313682 128313819 -74771713 + L2 LINE L2 3137 3272 0 475 271 110 41 chr5 128314164 128314382 -74771150 - MIR SINE MIR 0 262 30 320 172 16 0 chr5 128315127 128315191 -74770341 + MLT1K LTR MaLR 522 586 -2 249 390 41 48 chr5 128315256 128315546 -74769986 - L2 LINE L2 -181 3091 2804 204 355 91 32 chr5 128315677 128316018 -74769514 + L2 LINE L2 2593 2953 -361 261 0 0 0 chr5 128316360 128316389 -74769143 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 269 257 71 0 chr5 128316654 128316724 -74768808 - L2 LINE L2 -77 3195 3121 542 284 26 26 chr5 128316777 128316971 -74768561 + MIR SINE MIR 67 260 -2 1136 128 0 10 chr5 128317503 128317707 -74767825 - L1MA4 LINE L1 -6 6294 6093 231 62 0 31 chr5 128318343 128318375 -74767157 + MLT1E3 LTR MaLR 1 31 -593 753 271 48 106 chr5 128318424 128318859 -74766673 + MLT1E2-int LTR MaLR 961 1370 -1 1539 218 153 92 chr5 128318861 128319477 -74766055 + MLT1E2 LTR MaLR 2 626 0 2158 136 36 25 chr5 128319958 128320318 -74765214 - THE1B LTR MaLR 0 364 1 747 257 57 6 chr5 128320439 128320614 -74764918 + MER5A DNA MER1_type 2 185 -4 24 32 0 0 chr5 128321114 128321145 -74764387 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 128321176 128321209 -74764323 + AT_rich Low_complexity Low_complexity 1 33 0 1760 267 35 20 chr5 128321604 128322147 -74763385 + MER90 LTR ERV1 4 554 -21 23 0 0 0 chr5 128322157 128322180 -74763352 + AT_rich Low_complexity Low_complexity 1 23 0 2032 186 64 20 chr5 128322422 128322682 -74762850 + MSTB LTR MaLR 1 287 -139 2194 121 3 0 chr5 128322682 128322979 -74762553 + AluSg SINE Alu 1 298 -12 2032 186 64 20 chr5 128322979 128323126 -74762406 + MSTB LTR MaLR 287 426 0 9852 157 13 7 chr5 128323126 128324766 -74760766 + MSTB-int LTR MaLR 1 1651 0 1380 183 167 11 chr5 128324766 128325156 -74760376 + MSTA LTR MaLR 1 411 -17 255 275 14 0 chr5 128325235 128325304 -74760228 - MIR SINE MIR -15 247 178 326 277 226 5 chr5 128325324 128325519 -74760013 - MLT1L LTR MaLR -28 587 350 380 299 51 45 chr5 128325758 128325915 -74759617 - MIR SINE MIR -85 177 20 374 252 58 10 chr5 128326275 128326378 -74759154 + L2 LINE L2 3201 3308 -5 2305 81 10 0 chr5 128326541 128326836 -74758696 - AluSp SINE Alu -15 298 1 26 30 0 0 chr5 128326842 128326875 -74758657 + AT_rich Low_complexity Low_complexity 1 33 0 597 260 137 22 chr5 128327859 128328313 -74757219 - L1ME4a LINE L1 -28 6093 5588 31 0 0 0 chr5 128328627 128328658 -74756874 + AT_rich Low_complexity Low_complexity 1 31 0 1787 249 59 47 chr5 128328783 128329517 -74756015 + L1MC4a LINE L1 5122 5403 -743 23 33 0 0 chr5 128329670 128329700 -74755832 + AT_rich Low_complexity Low_complexity 1 30 0 558 304 62 5 chr5 128330500 128330694 -74754838 - MIR SINE MIR -43 219 15 200 307 204 15 chr5 128331315 128331452 -74754080 - MIR3 SINE MIR -15 193 31 203 274 60 48 chr5 128331602 128331686 -74753846 + MIR SINE MIR 19 103 -159 694 317 30 25 chr5 128332025 128332422 -74753110 - L1ME3A LINE L1 -222 5948 5550 718 129 0 16 chr5 128332455 128332579 -74752953 - L1MB8 LINE L1 -11 6167 6046 2211 120 0 0 chr5 128333071 128333371 -74752161 - AluSg SINE Alu -10 300 1 495 0 0 0 chr5 128333493 128333548 -74751984 + (TA)n Simple_repeat Simple_repeat 2 56 0 545 314 47 0 chr5 128335242 128335411 -74750121 - MIR SINE MIR -63 199 23 261 350 39 0 chr5 128335466 128335569 -74749963 + MER97b DNA MER1_type? 76 182 -871 280 288 110 8 chr5 128335600 128335718 -74749814 + MLT1L LTR MaLR 330 459 -156 264 211 0 0 chr5 128335746 128335798 -74749734 - MER46A DNA MER2_type -86 150 99 * 486 99 10 0 chr5 128335763 128335835 -74749697 + Tigger4(Zombi) DNA MER2_type 263 2731 0 2316 118 45 5 chr5 128335835 128336209 -74749323 - L1MB4 LINE L1 -5 6175 5787 260 229 0 24 chr5 128336232 128336315 -74749217 + MLT1L LTR MaLR 500 580 -35 2753 0 3 3 chr5 128336605 128336907 -74748625 - AluYa5 SINE Alu -9 302 1 404 238 151 24 chr5 128337712 128337838 -74747694 - MIR3 SINE MIR -31 177 36 1709 145 6 63 chr5 128340532 128340882 -74744650 - AluJb SINE Alu 0 312 1 625 266 100 0 chr5 128342716 128342957 -74742575 - L1MC4a LINE L1 -1919 5889 5625 722 264 118 14 chr5 128343433 128343653 -74741879 + MIR SINE MIR 20 262 0 401 165 25 13 chr5 128343716 128343795 -74741737 + MER5C DNA MER1_type 3 82 -242 1140 258 64 123 chr5 128344139 128345016 -74740516 - L2 LINE L2 -548 2766 1942 361 368 80 82 chr5 128345397 128346368 -74739164 - L2 LINE L2 -349 2965 1997 330 333 40 11 chr5 128347227 128347404 -74738128 + LTR67 LTR ERVL 376 557 0 999 196 5 5 chr5 128347420 128347604 -74737928 + MER58A DNA MER1_type 40 223 -1 451 308 86 20 chr5 128348026 128348224 -74737308 + L2 LINE L2 3103 3313 0 1114 211 156 8 chr5 128348413 128348669 -74736863 + AluJo SINE Alu 1 294 -8 323 270 27 18 chr5 128349335 128349446 -74736086 + L1ME LINE L1 140 251 -5954 297 271 12 12 chr5 128349711 128349796 -74735736 + L1ME LINE L1 637 721 -5484 525 279 42 38 chr5 128349948 128350424 -74735108 + L1ME LINE L1 1031 1508 -4888 1203 265 125 22 chr5 128350509 128350694 -74734838 + L1ME LINE L1 3342 3506 -2709 1077 108 32 0 chr5 128350694 128350852 -74734680 - L1PA11 LINE L1 -2 6172 6010 1203 265 125 22 chr5 128350852 128351207 -74734325 + L1ME LINE L1 3506 3962 -2253 1999 133 3 13 chr5 128351207 128351507 -74734025 + AluSx SINE Alu 1 297 -15 1203 265 125 22 chr5 128351507 128351613 -74733919 + L1ME LINE L1 3962 4056 -2159 1248 280 50 24 chr5 128351622 128352286 -74733246 + L1ME LINE L1 4304 4984 -1231 21 57 0 0 chr5 128352528 128352563 -74732969 + AT_rich Low_complexity Low_complexity 1 35 0 182 235 0 0 chr5 128353481 128353515 -74732017 + MIR SINE MIR 214 247 -15 258 32 0 0 chr5 128353550 128353581 -74731951 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 729 319 88 17 chr5 128354350 128354829 -74730703 + L2 LINE L2 2378 2890 -424 2302 161 11 41 chr5 128354838 128354985 -74730547 + MER65A LTR ERV1 1 151 -294 2315 60 7 7 chr5 128354985 128355291 -74730241 + AluY SINE Alu 1 306 0 2302 161 11 41 chr5 128355291 128355601 -74729931 + MER65A LTR ERV1 151 445 0 469 215 88 106 chr5 128355767 128356013 -74729519 + L1ME4a LINE L1 5743 5985 -136 1263 167 8 68 chr5 128356013 128356265 -74729267 + MER8 DNA MER2_type 3 239 0 469 215 88 106 chr5 128356265 128356302 -74729230 + L1ME4a LINE L1 5985 6021 -100 230 241 0 0 chr5 128356302 128356356 -74729176 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 25 65 0 0 chr5 128357032 128357078 -74728454 + AT_rich Low_complexity Low_complexity 1 46 0 816 196 0 0 chr5 128357295 128357428 -74728104 + FLAM_A SINE Alu 1 133 0 2070 262 108 70 chr5 128358021 128359262 -74726270 - L2 LINE L2 -358 2956 1669 672 97 0 65 chr5 128359507 128359631 -74725901 + L1PA7 LINE L1 6036 6151 -3 200 310 138 26 chr5 128359631 128359747 -74725785 + MER5A DNA MER1_type 60 188 -1 29 47 0 0 chr5 128359905 128359948 -74725584 + AT_rich Low_complexity Low_complexity 1 43 0 366 271 93 117 chr5 128360278 128360773 -74724759 + L1M4 LINE L1 633 1115 -5734 198 0 0 0 chr5 128360930 128360952 -74724580 + (T)n Simple_repeat Simple_repeat 1 22 0 189 299 90 72 chr5 128361671 128361889 -74723643 + L2 LINE L2 1842 2068 -1246 2266 41 0 4 chr5 128361889 128362157 -74723375 + AluY SINE Alu 39 305 -6 189 299 90 72 chr5 128362157 128362216 -74723316 + L2 LINE L2 2068 2124 -1190 368 244 35 23 chr5 128362519 128362605 -74722927 - L2 LINE L2 -50 3222 3136 2936 325 60 26 chr5 128362648 128364125 -74721407 + ERVL LTR ERVL 3775 5302 -462 1556 258 55 6 chr5 128364164 128364710 -74720822 + L1M4 LINE L1 3889 4461 -2387 854 282 97 37 chr5 128364708 128366248 -74719284 + L1MEc LINE L1 1300 3052 -3163 * 2047 226 165 5 chr5 128366248 128366811 -74718721 + MLT1E1 LTR MaLR 2 654 0 690 248 115 40 chr5 128366928 128367424 -74718108 + L1MEc LINE L1 3201 3733 -2482 1477 254 203 23 chr5 128367427 128369204 -74716328 + L1MEc LINE L1 3811 5922 -317 29 47 0 0 chr5 128369244 128369287 -74716245 + AT_rich Low_complexity Low_complexity 1 43 0 293 240 62 93 chr5 128369331 128369460 -74716072 + MER5C DNA MER1_type 1 125 -199 184 200 125 0 chr5 128370028 128370068 -74715464 + L3 LINE CR1 427 471 -1106 2221 108 0 0 chr5 128370481 128370778 -74714754 - AluSx SINE Alu -15 297 1 259 293 221 14 chr5 128370942 128371150 -74714382 - MIR SINE MIR 0 262 12 979 230 81 13 chr5 128371217 128371452 -74714080 + MIR SINE MIR 2 252 -10 23 0 0 0 chr5 128371944 128371967 -74713565 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 128373723 128373744 -74711788 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 128375597 128375625 -74709907 + AT_rich Low_complexity Low_complexity 1 28 0 2337 94 0 0 chr5 128376154 128376441 -74709091 - AluSg SINE Alu -23 287 1 553 195 154 33 chr5 128376472 128376744 -74708788 - L1MC5 LINE L1 -48 7913 7609 488 226 144 0 chr5 128376811 128376992 -74708540 - L1MC5 LINE L1 -443 7518 7312 305 260 8 63 chr5 128376998 128377125 -74708407 - L1MC4 LINE L1 -568 7474 7355 228 234 9 72 chr5 128377147 128377258 -74708274 - L1MC5 LINE L1 -728 7233 7130 1240 138 14 5 chr5 128377850 128378060 -74707472 - Tigger4(Zombi) DNA MER2_type 0 2731 2520 419 172 0 35 chr5 128378055 128378142 -74707390 - Tigger4(Zombi) DNA MER2_type -2619 112 29 * 437 279 146 26 chr5 128379222 128379448 -74706084 - MIR SINE MIR -8 254 2 628 199 7 35 chr5 128380829 128380970 -74704562 - MER20 DNA MER1_type 0 219 83 199 264 69 76 chr5 128381974 128382118 -74703414 + L2 LINE L2 2911 3053 -219 351 292 196 14 chr5 128382238 128382457 -74703075 + MIR SINE MIR 3 261 -1 184 291 25 76 chr5 128382443 128382522 -74703010 + L2 LINE L2 3190 3264 -8 * 703 309 91 33 chr5 128382610 128383070 -74702462 + L2 LINE L2 2447 2933 -381 230 264 0 0 chr5 128383244 128383297 -74702235 + L2 LINE L2 3207 3259 -54 324 327 48 0 chr5 128383432 128383536 -74701996 - L3 LINE CR1 -56 1521 1413 688 69 0 10 chr5 128384636 128384737 -74700795 - AluSg/x SINE Alu 0 312 213 700 274 76 14 chr5 128384881 128385104 -74700428 + MIR SINE MIR 20 256 -6 366 280 16 21 chr5 128385104 128385297 -74700235 + L1ME3A LINE L1 5423 5614 -556 249 33 0 0 chr5 128385344 128385374 -74700158 + (TA)n Simple_repeat Simple_repeat 1 30 0 231 246 16 16 chr5 128385442 128385503 -74700029 + Charlie1 DNA MER1_type 1 61 -2700 660 181 127 15 chr5 128385511 128385716 -74699816 + Charlie1 DNA MER1_type 2364 2591 -170 655 182 11 74 chr5 128385710 128385885 -74699647 + MLT1C LTR MaLR 6 169 -298 1254 100 22 0 chr5 128385885 128386065 -74699467 + THE1B LTR MaLR 1 184 -180 573 111 0 0 chr5 128386053 128386134 -74699398 + THE1B LTR MaLR 42 122 -242 * 1222 156 14 0 chr5 128386265 128386477 -74699055 + THE1B LTR MaLR 150 364 0 906 218 12 97 chr5 128386477 128386808 -74698724 + MLT1C LTR MaLR 165 467 0 240 131 16 0 chr5 128386808 128386868 -74698664 + Charlie1 DNA MER1_type 2578 2638 -123 27 49 0 0 chr5 128386890 128386931 -74698601 + AT_rich Low_complexity Low_complexity 1 41 0 1889 190 0 6 chr5 128386945 128387256 -74698276 + AluJo SINE Alu 1 309 -3 543 263 69 95 chr5 128387293 128387799 -74697733 + L1ME3A LINE L1 5655 6147 -23 1172 219 69 92 chr5 128387842 128388289 -74697243 - MLT1H LTR MaLR -6 543 107 898 244 75 50 chr5 128388293 128388653 -74696879 - MLT2F LTR ERVL 0 663 295 234 232 0 29 chr5 128388718 128388787 -74696745 - MLT2F LTR ERVL -594 69 3 370 301 90 5 chr5 128389164 128389345 -74696187 + MIR SINE MIR 44 242 -20 355 239 0 0 chr5 128389894 128389965 -74695567 + MER7A DNA MER2_type 2 72 -276 1622 148 44 0 chr5 128390050 128390321 -74695211 + MER7A DNA MER2_type 64 344 -2 1472 110 4 51 chr5 128390558 128390794 -74694738 + AluJb SINE Alu 77 301 -11 458 153 34 40 chr5 128390819 128390996 -74694536 + GA-rich Low_complexity Low_complexity 3 178 0 4157 99 21 25 chr5 128391150 128391907 -74693625 + L1PB1 LINE L1 5398 6151 0 210 171 0 0 chr5 128391934 128391969 -74693563 + A-rich Low_complexity Low_complexity 1 35 0 1061 115 28 6 chr5 128391969 128392151 -74693381 - LTR39 LTR ERV1 -552 231 46 1438 132 78 71 chr5 128392420 128392610 -74692922 - AluJo SINE Alu -15 297 103 2259 78 7 3 chr5 128392610 128392905 -74692627 + AluSq SINE Alu 1 296 -17 1438 132 78 71 chr5 128392905 128393009 -74692523 - AluJo SINE Alu -209 103 1 21 0 0 0 chr5 128393100 128393121 -74692411 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 128394480 128394505 -74691027 + GC_rich Low_complexity Low_complexity 1 25 0 239 284 97 45 chr5 128396494 128396628 -74688904 - MIR3 SINE MIR -43 165 25 235 323 120 0 chr5 128397185 128397352 -74688180 - MLT1L LTR MaLR -6 609 423 854 119 152 48 chr5 128397595 128397805 -74687727 - AluSq SINE Alu -81 232 1 1996 141 3 0 chr5 128398027 128398349 -74687183 - AluSx SINE Alu 0 312 1 27 0 0 0 chr5 128398537 128398564 -74686968 + AT_rich Low_complexity Low_complexity 1 27 0 3955 102 33 2 chr5 128398888 128399489 -74686043 + MER51A LTR ERV1 15 634 0 916 205 42 17 chr5 128399526 128399845 -74685687 + L1 LINE L1 4938 5267 -879 413 245 31 0 chr5 128400932 128401030 -74684502 + MIR SINE MIR 86 186 -76 5743 187 43 18 chr5 128401163 128402099 -74683433 - L1 LINE L1 -1978 4168 3179 2121 143 0 6 chr5 128402099 128402413 -74683119 + AluSx SINE Alu 1 312 0 5743 187 43 18 chr5 128402413 128402947 -74682585 - L1 LINE L1 -2967 3179 2660 229 249 83 57 chr5 128403104 128403297 -74682235 - HAL1 LINE L1 -1168 1339 1142 344 265 120 52 chr5 128403303 128403594 -74681938 - L1MEd LINE L1 -5104 1015 705 365 354 76 61 chr5 128403674 128404132 -74681400 - L1MEd LINE L1 -5525 594 130 189 74 0 0 chr5 128405452 128405479 -74680053 + (TC)n Simple_repeat Simple_repeat 1 27 0 2307 190 96 75 chr5 128405711 128406622 -74678910 + L1MD3 LINE L1 6799 7974 -21 26 64 0 0 chr5 128406686 128406733 -74678799 + AT_rich Low_complexity Low_complexity 1 47 0 557 267 95 0 chr5 128407067 128407288 -74678244 - L1MC4a LINE L1 -1919 5889 5648 602 231 113 52 chr5 128407950 128408179 -74677353 + MIR SINE MIR 20 262 0 404 165 25 13 chr5 128408242 128408321 -74677211 + MER5C DNA MER1_type 3 82 -242 432 146 24 0 chr5 128408665 128408747 -74676785 - L2 LINE L2 -548 2766 2683 633 245 72 36 chr5 128409006 128409312 -74676220 + L1MEc LINE L1 470 786 -5610 2194 184 68 6 chr5 128409328 128409801 -74675731 - MER90 LTR ERV1 -44 570 69 1729 117 36 4 chr5 128410861 128411108 -74674424 - AluSq SINE Alu -58 255 1 276 77 0 0 chr5 128413526 128413565 -74671967 + (CA)n Simple_repeat Simple_repeat 2 40 0 2226 129 18 6 chr5 128413876 128414208 -74671324 - MER1B DNA MER1_type -1 336 1 2163 103 3 3 chr5 128414869 128415160 -74670372 - AluSp SINE Alu -22 291 1 286 175 21 41 chr5 128415161 128415258 -74670274 + Charlie7 DNA MER1_type 2518 2612 0 1406 120 5 0 chr5 128415787 128415979 -74669553 + AluSg SINE Alu 1 193 -117 275 24 0 49 chr5 128417177 128417218 -74668314 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 357 203 126 35 chr5 128417421 128417564 -74667968 + AluSc SINE Alu 1 156 -143 251 321 130 14 chr5 128420138 128420279 -74665253 + MIR SINE MIR 28 140 -68 251 156 0 0 chr5 128420626 128420671 -74664861 - AluSc SINE Alu -2 297 253 570 264 294 18 chr5 128421611 128422142 -74663390 - L2 LINE L2 -17 3296 2611 724 232 38 22 chr5 128422554 128422739 -74662793 + MER5A DNA MER1_type 1 188 -1 487 301 50 10 chr5 128422739 128422938 -74662594 + MIR SINE MIR 8 214 -48 353 215 5 0 chr5 128423060 128423129 -74662403 + MLT1G1 LTR MaLR 53 157 -431 491 213 50 50 chr5 128423184 128423253 -74662279 - MER63A DNA MER1_type -1513 175 107 184 42 0 0 chr5 128423253 128423277 -74662255 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2133 129 0 3 chr5 128423277 128423572 -74661960 - AluSx SINE Alu -18 294 1 491 213 50 50 chr5 128423572 128423661 -74661871 - MER63A DNA MER1_type -1579 109 16 232 214 131 21 chr5 128423705 128423850 -74661682 + MLT1G1 LTR MaLR 172 332 -198 325 253 82 35 chr5 128424392 128424455 -74661077 + MER5B DNA MER1_type 1 60 -118 2591 68 0 0 chr5 128424455 128424763 -74660769 + AluSc SINE Alu 1 308 -1 325 253 82 35 chr5 128424763 128424869 -74660663 + MER5B DNA MER1_type 60 178 0 276 305 81 58 chr5 128425410 128425893 -74659639 - L2 LINE L2 -85 3228 2733 1078 252 90 86 chr5 128425921 128426489 -74659043 + MER21B LTR ERV1 24 593 -270 223 378 8 8 chr5 128427447 128427566 -74657966 - MIR SINE MIR -122 140 22 1588 128 0 13 chr5 128428822 128429056 -74656476 + AluSg/x SINE Alu 73 303 -7 233 314 47 12 chr5 128429098 128429184 -74656348 + MER5A DNA MER1_type 40 128 -61 289 288 199 27 chr5 128429215 128429361 -74656171 + MER5A DNA MER1_type 19 189 0 396 0 0 0 chr5 128429528 128429572 -74655960 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 669 253 67 18 chr5 128430277 128430502 -74655030 - LTR16A1 LTR ERVL -55 402 167 819 246 81 68 chr5 128431592 128432059 -74653473 + MLT1J LTR MaLR 1 473 -38 312 217 158 33 chr5 128432253 128432373 -74653159 - L2 LINE L2 -233 3080 2946 181 279 16 16 chr5 128432503 128432564 -74652968 - L2 LINE L2 -526 2788 2728 261 328 109 7 chr5 128433494 128433787 -74651745 + L2 LINE L2 2990 3312 -1 21 57 0 0 chr5 128434360 128434395 -74651137 + GC_rich Low_complexity Low_complexity 1 35 0 2259 99 10 0 chr5 128436315 128436607 -74648925 + AluSx SINE Alu 1 295 -17 197 277 46 0 chr5 128436677 128436742 -74648790 - L2 LINE L2 0 3313 3246 206 31 0 31 chr5 128437086 128437118 -74648414 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 634 285 61 40 chr5 128437128 128437454 -74648078 - L2 LINE L2 0 3313 2981 234 171 37 37 chr5 128437524 128437651 -74647881 + (CGAAA)n Simple_repeat Simple_repeat 1 127 0 2004 166 0 3 chr5 128438720 128439033 -74646499 + AluJb SINE Alu 1 312 0 184 316 15 138 chr5 128440308 128440438 -74645094 + MIR3 SINE MIR 16 116 -92 2120 132 0 3 chr5 128440438 128440741 -74644791 - AluSx SINE Alu -10 302 1 184 316 15 138 chr5 128440741 128440806 -74644726 + MIR3 SINE MIR 116 187 -21 523 296 49 31 chr5 128440947 128441173 -74644359 - MIR SINE MIR -4 258 29 24 0 0 0 chr5 128441326 128441350 -74644182 + AT_rich Low_complexity Low_complexity 1 24 0 626 217 0 0 chr5 128442004 128442119 -74643413 + FLAM_A SINE Alu 16 130 -12 2217 126 7 0 chr5 128442122 128442432 -74643100 + AluSx SINE Alu 1 312 0 1152 158 108 21 chr5 128442434 128442674 -74642858 + AluJo SINE Alu 1 261 -51 521 275 147 18 chr5 128442949 128443167 -74642365 + MIR SINE MIR 17 262 0 360 313 61 0 chr5 128443823 128443970 -74641562 - LTR67 LTR ERVL -336 221 66 338 245 29 20 chr5 128444153 128444255 -74641277 + L2 LINE L2 3208 3310 -3 27 49 0 0 chr5 128444321 128444362 -74641170 + AT_rich Low_complexity Low_complexity 1 41 0 2088 105 36 0 chr5 128444404 128444706 -74640826 + AluSx SINE Alu 1 312 0 266 186 16 22 chr5 128445070 128445158 -74640374 - MIR SINE MIR -66 142 58 360 64 0 0 chr5 128445648 128445695 -74639837 + (TG)n Simple_repeat Simple_repeat 1 47 0 1944 112 80 0 chr5 128446250 128446536 -74638996 + AluSq SINE Alu 1 309 -4 635 276 12 12 chr5 128447036 128447206 -74638326 + MIR SINE MIR 5 174 -88 188 75 0 50 chr5 128447216 128447256 -74638276 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 707 256 27 116 chr5 128447288 128447694 -74637838 - L2 LINE L2 -22 3250 2881 2507 59 0 0 chr5 128448838 128449142 -74636390 + AluY SINE Alu 1 304 -7 1428 196 53 20 chr5 128449778 128450079 -74635453 - AluJo SINE Alu -1 311 1 2488 80 0 0 chr5 128450223 128450534 -74634998 + AluY SINE Alu 1 311 0 2149 103 10 17 chr5 128451409 128451709 -74633823 - AluSq SINE Alu -15 298 1 694 242 103 9 chr5 128452010 128452233 -74633299 - MIR SINE MIR 0 262 19 359 271 9 19 chr5 128452363 128452470 -74633062 + MER5A DNA MER1_type 54 159 -30 2348 87 13 0 chr5 128452723 128453022 -74632510 - AluY SINE Alu -8 303 1 4553 163 13 66 chr5 128453098 128453620 -74631912 - L1MB8 LINE L1 -3 6175 5627 2070 156 0 0 chr5 128453620 128453928 -74631604 - AluJb SINE Alu -4 308 1 4553 163 13 66 chr5 128453928 128454295 -74631237 - L1MB8 LINE L1 -551 5627 5242 2381 57 0 0 chr5 128454295 128454574 -74630958 - AluY SINE Alu -10 301 23 4553 163 13 66 chr5 128454574 128454711 -74630821 - L1MB8 LINE L1 -936 5242 5203 1658 155 68 4 chr5 128454711 128454999 -74630533 - AluSx SINE Alu 0 305 1 4553 163 13 66 chr5 128454999 128455031 -74630501 - L1MB8 LINE L1 -975 5203 5171 1424 142 14 0 chr5 128455080 128455299 -74630233 + MLT1C LTR MaLR 1 222 -245 764 263 6 6 chr5 128455328 128455499 -74630033 + MLT1C LTR MaLR 285 455 -12 3472 165 68 10 chr5 128455499 128456171 -74629361 + MER50 LTR ERV1 1 711 -23 386 95 32 0 chr5 128456222 128456285 -74629247 + CT-rich Low_complexity Low_complexity 3 67 0 745 177 6 116 chr5 128456286 128456467 -74629065 - AluSg/x SINE Alu 0 312 152 757 134 0 0 chr5 128456469 128456581 -74628951 + MER4E LTR ERV1 668 779 0 24 32 0 0 chr5 128456610 128456641 -74628891 + AT_rich Low_complexity Low_complexity 1 31 0 4324 123 76 1 chr5 128456778 128457446 -74628086 + MER72 LTR ERV1 5 722 0 250 299 0 45 chr5 128457563 128457720 -74627812 + T-rich Low_complexity Low_complexity 4 153 0 * 467 268 11 28 chr5 128457682 128457976 -74627556 + CT-rich Low_complexity Low_complexity 1 289 0 183 80 0 0 chr5 128458561 128458586 -74626946 + (CA)n Simple_repeat Simple_repeat 2 26 0 2258 101 0 29 chr5 128459152 128459468 -74626064 - AluSg SINE Alu -3 307 1 38 22 0 0 chr5 128460335 128460380 -74625152 + AT_rich Low_complexity Low_complexity 1 45 0 289 220 45 0 chr5 128460380 128460512 -74625020 + (TA)n Simple_repeat Simple_repeat 1 138 0 35 41 0 0 chr5 128460512 128460561 -74624971 + AT_rich Low_complexity Low_complexity 1 49 0 196 342 26 0 chr5 128460704 128460780 -74624752 - L2 LINE L2 -581 2733 2656 2906 222 44 44 chr5 128460802 128461523 -74624009 - MER21B LTR ERV1 -124 739 19 425 333 29 29 chr5 128461714 128461918 -74623614 - ERVL LTR ERVL -3902 1862 1659 362 244 0 57 chr5 128463500 128463623 -74621909 - LTR67 LTR ERVL 0 557 442 363 259 28 9 chr5 128464948 128465056 -74620476 + L2 LINE L2 3198 3307 -6 1766 156 35 10 chr5 128465224 128465512 -74620020 + AluSx SINE Alu 2 296 -16 342 98 0 0 chr5 128465568 128465619 -74619913 + (TG)n Simple_repeat Simple_repeat 1 51 0 253 296 130 0 chr5 128466627 128466742 -74618790 - L2 LINE L2 -202 3070 2941 2485 78 7 0 chr5 128467973 128468280 -74617252 - AluY SINE Alu -2 309 1 343 110 55 0 chr5 128468348 128468421 -74617111 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 242 256 102 22 chr5 128469010 128469147 -74616385 - MARNA DNA Mariner -132 454 307 22 0 0 0 chr5 128469267 128469289 -74616243 + AT_rich Low_complexity Low_complexity 1 22 0 519 314 55 5 chr5 128469647 128469867 -74615665 - MIR SINE MIR -19 243 13 378 0 0 0 chr5 128469973 128470015 -74615517 + (CA)n Simple_repeat Simple_repeat 2 43 0 1895 121 47 83 chr5 128470737 128471124 -74614408 - THE1C LTR MaLR 0 375 3 2343 84 0 14 chr5 128472549 128472846 -74612686 - AluY SINE Alu -16 295 3 722 242 21 26 chr5 128473330 128473520 -74612012 - MER5A DNA MER1_type 0 189 1 202 295 19 50 chr5 128473711 128473841 -74611691 + MIR SINE MIR 33 152 -67 1517 211 48 8 chr5 128473849 128474200 -74611332 - LTR40c LTR ERVL -93 372 8 414 312 93 19 chr5 128474224 128474493 -74611039 - L1MC/D LINE L1 -2174 5634 5346 228 345 121 0 chr5 128474720 128474836 -74610696 - L2 LINE L2 0 3313 3184 311 273 0 13 chr5 128475041 128475118 -74610414 + MIR SINE MIR 32 107 -155 234 157 20 0 chr5 128475186 128475237 -74610295 - MER115 DNA AcHobo -45 648 597 1855 226 77 27 chr5 128475240 128475712 -74609820 + L1M4 LINE L1 4577 5089 -1057 2294 107 7 3 chr5 128475712 128476020 -74609512 - AluSq SINE Alu -4 309 1 1855 226 77 27 chr5 128476020 128476174 -74609358 + L1M4 LINE L1 5089 5234 -912 1197 186 191 31 chr5 128476175 128476563 -74608969 + LTR7 LTR ERV1 1 450 0 964 209 28 6 chr5 128476563 128476967 -74608565 + HERVH LTR ERV1 1 446 -7267 11537 136 8 30 chr5 128477048 128479133 -74606399 + HERVH LTR ERV1 792 2830 -4883 3789 137 8 5 chr5 128479133 128479768 -74605764 + HERVH LTR ERV1 3357 3993 -3720 900 86 25 31 chr5 128479839 128480001 -74605531 + HERVH LTR ERV1 7551 7711 -2 1096 157 101 138 chr5 128480005 128480339 -74605193 + LTR7 LTR ERV1 3 317 -133 2065 98 44 24 chr5 128480339 128480634 -74604898 + AluY SINE Alu 1 301 -10 1096 157 101 138 chr5 128480634 128480764 -74604768 + LTR7 LTR ERV1 317 450 0 246 167 33 0 chr5 128480810 128480870 -74604662 - Zaphod DNA AcHobo -84 3947 3886 257 140 18 0 chr5 128480870 128480927 -74604605 + GA-rich Low_complexity Low_complexity 3 60 0 434 126 101 17 chr5 128480996 128481115 -74604417 - Zaphod DNA AcHobo -308 3723 3595 2451 210 128 37 chr5 128481125 128482016 -74603516 - Zaphod DNA AcHobo -3059 972 1 469 313 79 5 chr5 128482045 128482259 -74603273 + L2 LINE L2 1923 2152 -1162 182 259 0 19 chr5 128482296 128482350 -74603182 + L2 LINE L2 2292 2344 -970 741 290 146 47 chr5 128482372 128482844 -74602688 + LTR33 LTR ERVL 3 521 0 321 348 56 0 chr5 128483364 128483525 -74602007 + HERVL LTR ERVL 4491 4660 -994 392 273 26 11 chr5 128483613 128483892 -74601640 + L1ME3 LINE L1 2693 4222 -1924 2552 240 62 11 chr5 128483899 128485036 -74600496 + L1ME3 LINE L1 4942 6142 -20 731 232 35 14 chr5 128485071 128485355 -74600177 + L1M4 LINE L1 2903 3192 -2954 697 241 110 87 chr5 128485824 128486169 -74599363 + MLT1K LTR MaLR 228 580 -8 815 182 0 0 chr5 128488050 128488182 -74597350 - FLAM_C SINE Alu -1 132 1 2349 102 0 0 chr5 128488493 128488798 -74596734 + AluSg SINE Alu 1 305 -5 262 309 51 60 chr5 128489161 128489378 -74596154 + L2 LINE L2 690 904 -2410 20042 156 42 12 chr5 128489616 128492995 -74592537 + L1MA2 LINE L1 1 3279 -4286 276 53 0 0 chr5 128492995 128493033 -74592499 + (CA)n Simple_repeat Simple_repeat 1 38 0 20042 156 42 12 chr5 128493033 128493200 -74592332 + L1MA2 LINE L1 3279 3440 -4125 2347 117 0 0 chr5 128493200 128493507 -74592025 + AluSg SINE Alu 1 307 -3 20042 156 42 12 chr5 128493507 128494568 -74590964 + L1MA2 LINE L1 3440 4751 -2814 4549 169 19 1 chr5 128494559 128495474 -74590058 + L1MA2 LINE L1 5696 6626 -939 * 5506 92 36 4 chr5 128495480 128496294 -74589238 + L1MA2 LINE L1 6884 7723 0 683 82 0 8 chr5 128496315 128496437 -74589095 - MER6 DNA MER2_type -137 728 608 5450 109 14 19 chr5 128496443 128497320 -74588212 + L1MA3 LINE L1 5429 6300 -5 284 333 62 36 chr5 128497393 128497699 -74587833 + L2 LINE L2 1354 1667 -1647 1143 234 65 19 chr5 128499274 128499846 -74585686 - L1MEc LINE L1 -2818 3397 2741 * 41569 39 3 8 chr5 128499845 128506029 -74579503 + L1PA3 LINE L1 4 6155 0 337 202 126 25 chr5 128506025 128506144 -74579388 - L1MEc LINE L1 -3454 2761 2631 * 1309 288 37 15 chr5 128506148 128506555 -74578977 - LTR40a LTR ERVL -103 416 1 230 274 44 35 chr5 128506564 128506626 -74578906 + L2 LINE L2 1683 1748 -1566 1619 197 44 19 chr5 128506626 128506991 -74578541 - MLT1A2 LTR MaLR 0 374 1 230 274 44 35 chr5 128506991 128507041 -74578491 + L2 LINE L2 1748 1796 -1518 1987 204 21 12 chr5 128507261 128507745 -74577787 - L1MB7 LINE L1 -16 6168 5681 1251 219 135 4 chr5 128507758 128508272 -74577260 - L1MEc LINE L1 -3570 2645 2112 22 0 0 0 chr5 128508272 128508294 -74577238 + AT_rich Low_complexity Low_complexity 1 22 0 221 98 78 0 chr5 128508406 128508457 -74577075 + (TA)n Simple_repeat Simple_repeat 2 56 0 266 125 21 0 chr5 128508466 128508514 -74577018 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 279 257 29 0 chr5 128508514 128508584 -74576948 - MER77 LTR ERV1 -179 426 355 442 250 38 15 chr5 128508672 128508804 -74576728 + MIR SINE MIR 2 136 -126 280 270 40 53 chr5 128509490 128509642 -74575890 - L1MB7 LINE L1 -703 5467 5315 2079 187 192 0 chr5 128511964 128512558 -74572974 - L1MD2 LINE L1 -363 5996 5258 1872 190 76 2 chr5 128512735 128513171 -74572361 - L1MB3 LINE L1 -7 6412 5945 5860 198 41 19 chr5 128513184 128513352 -74572180 - L1MB3 LINE L1 -540 5879 5716 2207 134 0 0 chr5 128513352 128513651 -74571881 - AluSx SINE Alu -13 299 1 5860 198 41 19 chr5 128513651 128515286 -74570246 - L1MB3 LINE L1 -703 5716 4032 1997 184 31 38 chr5 128515290 128515709 -74569823 - MSTC LTR MaLR 0 428 13 803 179 30 12 chr5 128515710 128515878 -74569654 - L1MB3 LINE L1 -2358 4024 3854 6442 18 0 4 chr5 128515878 128516583 -74568949 + SVA Other Other 685 1386 0 1161 167 51 68 chr5 128517360 128517654 -74567878 + AluJb SINE Alu 2 290 -12 228 67 0 0 chr5 128517669 128517699 -74567833 + (A)n Simple_repeat Simple_repeat 1 30 0 4218 231 26 6 chr5 128517751 128519732 -74565800 - L1MB3 LINE L1 -2520 3862 1841 180 0 0 0 chr5 128519828 128519848 -74565684 + (T)n Simple_repeat Simple_repeat 1 20 0 1860 206 81 46 chr5 128519941 128519997 -74565535 - MLT2B1 LTR ERVL 0 520 467 183 80 0 0 chr5 128519997 128520022 -74565510 + (CA)n Simple_repeat Simple_repeat 2 26 0 1860 206 81 46 chr5 128520022 128520461 -74565071 - MLT2B1 LTR ERVL -53 467 8 3360 115 28 0 chr5 128520463 128520960 -74564572 + MER75 DNA T2_type 4 514 0 233 403 93 0 chr5 128521030 128521169 -74564363 - MIR3 SINE MIR -18 190 39 291 296 68 28 chr5 128522722 128522803 -74562729 + L2 LINE L2 3095 3171 -142 198 0 0 0 chr5 128522803 128522825 -74562707 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 291 296 68 28 chr5 128522825 128522919 -74562613 + L2 LINE L2 3171 3277 -36 2149 150 23 69 chr5 128523095 128523529 -74562003 + MLT2D LTR ERVL 1 414 0 953 206 167 30 chr5 128523643 128524142 -74561390 + Charlie7 DNA MER1_type 1513 2146 -466 1820 164 4 0 chr5 128524163 128524443 -74561089 + AluSq SINE Alu 2 282 -31 1888 172 5 37 chr5 128524481 128524858 -74560674 + MLT1A1 LTR MaLR 1 365 0 3746 218 51 40 chr5 128524861 128524897 -74560635 + MLT1A1-int LTR MaLR 3 37 -1334 288 0 0 0 chr5 128524897 128524929 -74560603 + (TA)n Simple_repeat Simple_repeat 2 33 0 2077 152 7 0 chr5 128524929 128525232 -74560300 - AluSx SINE Alu -7 305 1 3746 218 51 40 chr5 128525232 128526532 -74559000 + MLT1A1-int LTR MaLR 36 1362 -9 406 271 94 33 chr5 128526617 128526717 -74558815 + Charlie7 DNA MER1_type 2204 2296 -316 2210 114 0 10 chr5 128526717 128527037 -74558495 + AluSq SINE Alu 1 313 0 406 271 94 33 chr5 128527037 128527297 -74558235 + Charlie7 DNA MER1_type 2296 2586 -26 384 326 93 8 chr5 128528184 128528313 -74557219 + MIR SINE MIR 28 167 -95 360 0 0 0 chr5 128528341 128528381 -74557151 + (TA)n Simple_repeat Simple_repeat 1 40 0 3191 170 13 3 chr5 128528519 128529144 -74556388 + L1MB8 LINE L1 5546 6176 -2 654 215 0 8 chr5 128530070 128530200 -74555332 - FLAM_A SINE Alu -4 129 1 1991 174 25 70 chr5 128531619 128532061 -74553471 + MLT2C2 LTR ERVL 3 423 -41 477 0 0 0 chr5 128532061 128532114 -74553418 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1991 174 25 70 chr5 128532114 128532155 -74553377 + MLT2C2 LTR ERVL 423 464 0 616 160 8 8 chr5 128532284 128532403 -74553129 - MER66A LTR ERV1 0 478 360 1111 178 0 0 chr5 128532561 128532741 -74552791 + AluJo SINE Alu 121 300 -12 1319 210 68 78 chr5 128532981 128533466 -74552066 + Charlie4a DNA MER1_type 28 507 -1 794 210 19 6 chr5 128533887 128534049 -74551483 - FRAM SINE Alu -13 163 1 772 195 39 13 chr5 128534845 128534999 -74550533 + MER5A DNA MER1_type 10 167 -22 250 320 50 0 chr5 128535355 128535455 -74550077 + L2 LINE L2 3168 3272 0 1476 278 71 20 chr5 128535509 128536098 -74549434 - MLT1E2 LTR MaLR -7 619 1 2281 107 36 38 chr5 128536227 128536592 -74548940 - THE1B LTR MaLR 0 364 1 11425 111 2 0 chr5 128536592 128538167 -74547365 - THE1B-int LTR MaLR 0 1580 2 2144 121 39 36 chr5 128538168 128538531 -74547001 - THE1B LTR MaLR 0 364 1 1748 165 0 0 chr5 128538534 128538794 -74546738 - AluJb SINE Alu -52 260 1 183 322 215 0 chr5 128539075 128539196 -74546336 - MIR SINE MIR -70 192 46 183 328 31 16 chr5 128539763 128539827 -74545705 - L2 LINE L2 -2 3270 3206 323 326 68 0 chr5 128540735 128540867 -74544665 - MIR SINE MIR 0 262 122 300 160 31 0 chr5 128541327 128541401 -74544131 - MLT1E3 LTR MaLR 0 624 473 5125 123 16 14 chr5 128541410 128542269 -74543263 - L1PA15 LINE L1 -21 6144 5284 1809 238 150 2 chr5 128542269 128542743 -74542789 - MLT1E LTR MaLR -49 544 1 183 311 33 0 chr5 128542826 128542887 -74542645 + L2 LINE L2 3207 3269 -44 1826 135 0 66 chr5 128543827 128544163 -74541369 + AluSx SINE Alu 1 316 0 569 187 0 0 chr5 128545692 128545799 -74539733 + Charlie4 DNA MER1_type 163 269 -1692 208 333 0 0 chr5 128545946 128546009 -74539523 - L2 LINE L2 -1 3271 3209 309 337 53 0 chr5 128547304 128547399 -74538133 + L2 LINE L2 3148 3247 -25 770 231 70 0 chr5 128547449 128547635 -74537897 - MIR SINE MIR -11 251 53 1825 151 21 0 chr5 128547802 128548086 -74537446 + AluSx SINE Alu 9 298 -14 894 193 64 16 chr5 128549115 128549364 -74536168 + Charlie4 DNA MER1_type 37 297 -1664 1580 148 51 0 chr5 128549398 128549655 -74535877 - AluJb SINE Alu -12 300 31 826 160 87 19 chr5 128549673 128549879 -74535653 + Charlie4 DNA MER1_type 1739 1958 -3 3365 65 16 16 chr5 128550001 128550445 -74535087 - MLT2A1 LTR ERVL 0 444 1 41948 67 15 3 chr5 128550445 128550578 -74534954 - HERVL-A1 LTR ERVL 0 5654 5524 2212 84 0 3 chr5 128550578 128550862 -74534670 - AluY SINE Alu -28 283 1 41948 67 15 3 chr5 128550862 128556315 -74529217 - HERVL-A1 LTR ERVL -130 5524 1 298 135 0 0 chr5 128556315 128556367 -74529165 - MLT2A1 LTR ERVL 0 520 469 245 203 25 8 chr5 128556370 128556488 -74529044 + (TA)n Simple_repeat Simple_repeat 2 121 0 2710 82 31 8 chr5 128556495 128556883 -74528649 - MLT2A1 LTR ERVL -47 397 1 491 148 93 84 chr5 128556929 128557050 -74528482 - L1ME1 LINE L1 0 6178 6052 353 196 59 29 chr5 128558105 128558207 -74527325 - MIR SINE MIR -56 206 102 199 216 27 81 chr5 128558312 128558386 -74527146 - L3 LINE CR1 -106 1471 1402 189 195 0 0 chr5 128558956 128558997 -74526535 + CT-rich Low_complexity Low_complexity 1 41 0 427 190 13 0 chr5 128559929 128560008 -74525524 - MER96 DNA MER1_type? 0 175 96 267 210 16 0 chr5 128560010 128560072 -74525460 + MER96 DNA MER1_type? 113 175 0 445 248 225 34 chr5 128560095 128560357 -74525175 - L2 LINE L2 -3 3310 2999 573 266 43 71 chr5 128560378 128560660 -74524872 + MER102b DNA MER1_type 68 341 0 2371 150 2 34 chr5 128563174 128563588 -74521944 - MER57A LTR ERV1 0 403 3 1637 121 12 8 chr5 128563590 128563847 -74521685 - MER57A-int LTR ERV1 0 7537 7280 708 107 41 8 chr5 128563850 128563972 -74521560 - LTR54B LTR ERV1 -370 128 3 6192 151 22 28 chr5 128563972 128564688 -74520844 - MER57A-int LTR ERV1 -390 7147 6439 1790 157 35 3 chr5 128564688 128564975 -74520557 - AluJb SINE Alu -16 296 1 6192 151 22 28 chr5 128564975 128565401 -74520131 - MER57A-int LTR ERV1 -1098 6439 6012 19178 165 29 11 chr5 128565401 128572317 -74513215 - L1M1 LINE L1 -669 7054 10 1930 189 82 5 chr5 128573169 128573593 -74511939 + LTR32 LTR ERVL 15 471 0 290 326 47 0 chr5 128573593 128573679 -74511853 + L2 LINE L2 3178 3267 -5 194 267 322 0 chr5 128573722 128573812 -74511720 - MIR SINE MIR -116 146 28 211 339 15 46 chr5 128573835 128573965 -74511567 - L2 LINE L2 -32 3281 3156 299 276 88 68 chr5 128576070 128576262 -74509270 - LTR24C-int LTR ERV1 -6184 574 379 533 268 60 63 chr5 128576296 128576803 -74508729 - LTR24C-int LTR ERV1 -4476 647 1 2673 156 99 4 chr5 128576803 128577360 -74508172 - LTR24C LTR ERV1 0 635 26 6025 112 36 29 chr5 128577363 128577739 -74507793 - L1PA15 LINE L1 -1 6164 5792 255 79 0 0 chr5 128577739 128577777 -74507755 + (TG)n Simple_repeat Simple_repeat 2 39 0 6025 112 36 29 chr5 128577777 128579049 -74506483 - L1PA15 LINE L1 -373 5792 4512 1868 153 65 16 chr5 128579079 128579400 -74506132 + MER1B DNA MER1_type 1 337 0 224 236 0 18 chr5 128579728 128579783 -74505749 + (TATG)n Simple_repeat Simple_repeat 2 55 0 315 71 0 0 chr5 128579796 128579838 -74505694 + (TG)n Simple_repeat Simple_repeat 2 43 0 279 262 74 8 chr5 128579882 128580004 -74505528 + L1ME4a LINE L1 5990 6119 -2 1163 157 35 5 chr5 128580021 128580218 -74505314 + AluJo SINE Alu 82 284 -28 282 262 0 98 chr5 128581232 128581354 -74504178 + Charlie8 DNA MER1_type 9 118 -2299 1619 239 55 14 chr5 128581358 128581851 -74503681 + L1ME1 LINE L1 5649 6161 -5 355 301 42 0 chr5 128581856 128582022 -74503510 + Charlie8 DNA MER1_type 88 260 -2157 820 280 77 54 chr5 128582067 128582648 -74502884 - L2 LINE L2 -2 3311 2735 2047 50 0 0 chr5 128583164 128583406 -74502126 + AluY SINE Alu 70 311 0 882 142 74 11 chr5 128583691 128583867 -74501665 + LTR47A LTR ERVL 266 452 0 195 42 0 0 chr5 128584267 128584291 -74501241 + (A)n Simple_repeat Simple_repeat 1 24 0 828 189 72 6 chr5 128584312 128584492 -74501040 + LTR47A LTR ERVL 261 452 0 1278 255 50 82 chr5 128584887 128585221 -74500311 + L1MDa LINE L1 33 376 -6164 3639 134 16 10 chr5 128585221 128585502 -74500030 - L1PA16 LINE L1 -9 6157 5879 2245 138 11 16 chr5 128585502 128585879 -74499653 + THE1C LTR MaLR 1 375 0 3639 134 16 10 chr5 128585879 128586177 -74499355 - L1PA16 LINE L1 -287 5879 5575 1278 255 50 82 chr5 128586177 128586570 -74498962 + L1MDa LINE L1 376 1133 -5407 1877 152 9 99 chr5 128586570 128586916 -74498616 - MSTD LTR MaLR 0 396 21 2252 99 0 7 chr5 128586916 128587209 -74498323 + AluY SINE Alu 1 291 -20 1609 147 202 17 chr5 128587218 128587579 -74497953 - MSTA LTR MaLR 0 428 1 8937 183 19 5 chr5 128587579 128589207 -74496325 - THE1C-int LTR MaLR 0 1651 1 1667 129 83 55 chr5 128589207 128589248 -74496284 - THE1C LTR MaLR 0 375 337 2248 128 0 0 chr5 128589248 128589546 -74495986 + AluSx SINE Alu 1 298 -14 1667 129 83 55 chr5 128589546 128589867 -74495665 - THE1C LTR MaLR -38 337 3 1877 152 9 99 chr5 128589867 128589943 -74495589 - MSTD LTR MaLR -380 16 1 1660 204 86 27 chr5 128589943 128590503 -74495029 + L1MDa LINE L1 1129 1721 -4819 1229 201 9 67 chr5 128590505 128590833 -74494699 - MER57A LTR ERV1 -94 309 1 1223 189 25 17 chr5 128590844 128591198 -74494334 + L1MDa LINE L1 2190 2546 -3994 255 289 0 12 chr5 128592009 128592092 -74493440 + MER94 DNA DNA 1 82 -52 2081 153 19 13 chr5 128592782 128593155 -74492377 + THE1C LTR MaLR 1 375 0 340 207 16 0 chr5 128593676 128593797 -74491735 + (TA)n Simple_repeat Simple_repeat 1 123 0 1478 177 44 27 chr5 128594274 128594568 -74490964 - AluJo SINE Alu -13 299 1 1464 191 67 27 chr5 128594695 128594994 -74490538 + AluJb SINE Alu 1 311 -1 420 206 11 22 chr5 128595744 128595836 -74489696 + AluJo SINE Alu 57 147 -165 564 207 186 0 chr5 128596528 128596668 -74488864 + AluJo SINE Alu 129 294 -18 1074 176 50 97 chr5 128597489 128597933 -74487599 - LTR37A LTR ERV1 0 426 4 239 114 23 0 chr5 128598267 128598311 -74487221 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 282 8 32 chr5 128598815 128598939 -74486593 - MER104 DNA Tc2 -59 121 1 650 251 45 30 chr5 128598949 128599148 -74486384 - MIR SINE MIR 0 262 61 1611 174 32 48 chr5 128599302 128599618 -74485914 - AluJb SINE Alu -1 311 1 1190 112 39 0 chr5 128599659 128599837 -74485695 - U2 snRNA snRNA -1 187 3 1612 134 138 0 chr5 128600562 128600823 -74484709 + AluSx SINE Alu 2 298 -4 239 255 0 0 chr5 128601680 128601731 -74483801 + L2 LINE L2 3210 3260 -12 848 256 5 10 chr5 128602381 128602588 -74482944 - MLT1F LTR MaLR -335 207 2 483 216 52 9 chr5 128602596 128602712 -74482820 + MIR SINE MIR 86 206 -56 184 244 0 0 chr5 128603028 128603069 -74482463 + L2 LINE L2 2934 2974 -340 234 240 0 20 chr5 128603149 128603199 -74482333 + polypyrimidine Low_complexity Low_complexity 6 54 0 265 270 163 66 chr5 128603237 128603433 -74482099 - L2 LINE L2 -1 3312 3098 23 0 0 0 chr5 128603465 128603488 -74482044 + AT_rich Low_complexity Low_complexity 1 23 0 307 360 54 0 chr5 128603502 128603613 -74481919 + L2 LINE L2 3151 3267 -5 214 191 0 0 chr5 128603613 128603655 -74481877 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 1963 198 46 18 chr5 128604096 128604597 -74480935 - Charlie1b DNA MER1_type -8 515 1 495 263 36 15 chr5 128604703 128604840 -74480692 - MER5A DNA MER1_type -1 188 49 625 348 40 8 chr5 128605365 128605615 -74479917 + L2 LINE L2 2377 2634 -680 252 0 0 0 chr5 128605615 128605643 -74479889 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 454 219 45 62 chr5 128605643 128605821 -74479711 - L2 LINE L2 -17 3296 3122 255 233 17 0 chr5 128605788 128605848 -74479684 - L2 LINE L2 -1003 2311 2251 * 406 333 186 10 chr5 128605867 128606179 -74479353 + L2 LINE L2 2897 3263 -50 378 0 0 0 chr5 128606251 128606293 -74479239 + (CA)n Simple_repeat Simple_repeat 2 43 0 2022 128 16 29 chr5 128606352 128606664 -74478868 - AluJo SINE Alu -4 308 1 1387 127 45 5 chr5 128607082 128607303 -74478229 - MER30 DNA MER1_type 0 230 1 421 271 132 68 chr5 128607522 128607803 -74477729 - L1M4c LINE L1 -3170 3212 2914 350 310 120 0 chr5 128607827 128607969 -74477563 - L1M4c LINE L1 -3527 2855 2697 363 241 105 82 chr5 128608059 128608408 -74477124 - L1M4c LINE L1 -3831 2566 2160 571 312 15 31 chr5 128608658 128608982 -74476550 - HAL1 LINE L1 -766 1741 1423 376 194 31 0 chr5 128609120 128609218 -74476314 + CT-rich Low_complexity Low_complexity 1 101 0 257 273 0 0 chr5 128609230 128609285 -74476247 + polypyrimidine Low_complexity Low_complexity 3 57 0 368 238 114 69 chr5 128609447 128609649 -74475883 - HAL1 LINE L1 -1471 1036 826 563 149 11 0 chr5 128611397 128611484 -74474048 + AluJ/FLAM SINE Alu 12 99 -213 386 149 30 0 chr5 128612090 128612157 -74473375 + MER6 DNA MER2_type 1 790 -75 2149 144 21 3 chr5 128612171 128612547 -74472985 + MER6 DNA MER2_type 222 864 -1 809 154 0 27 chr5 128612866 128613015 -74472517 - AluJb SINE Alu 0 312 168 277 237 53 8 chr5 128613642 128613773 -74471759 - MER53 DNA DNA -40 149 13 706 184 38 6 chr5 128614016 128614174 -74471358 - L1MB8 LINE L1 -1 6177 6015 1212 130 37 9 chr5 128614218 128614433 -74471099 + MSTB-int LTR MaLR 1426 1646 -5 2383 158 44 5 chr5 128614439 128614849 -74470683 + MSTB LTR MaLR 1 426 0 602 219 26 13 chr5 128614849 128615000 -74470532 - L1MB8 LINE L1 -188 5990 5838 1274 193 0 0 chr5 128615002 128615204 -74470328 - AluJo SINE Alu -21 291 90 1080 198 99 0 chr5 128615211 128615538 -74469994 - L1MC4 LINE L1 -531 5653 5431 311 266 153 10 chr5 128615892 128616098 -74469434 + HAL1b LINE L1 300 1553 -821 405 268 156 33 chr5 128616760 128616978 -74468554 + MIR SINE MIR 3 246 -16 23 78 0 0 chr5 128616981 128617032 -74468500 + AT_rich Low_complexity Low_complexity 1 51 0 239 372 121 36 chr5 128618072 128618486 -74467046 + L2 LINE L2 2339 2787 -527 342 0 0 0 chr5 128618783 128618821 -74466711 + (TG)n Simple_repeat Simple_repeat 2 39 0 187 351 106 0 chr5 128618834 128618928 -74466604 + L2 LINE L2 3210 3313 0 405 102 0 0 chr5 128619075 128619134 -74466398 + (TA)n Simple_repeat Simple_repeat 1 59 0 378 275 61 36 chr5 128620398 128620546 -74464986 - MIR3 SINE MIR -54 154 15 366 283 25 63 chr5 128620683 128620842 -74464690 + MER5A DNA MER1_type 7 159 -30 577 210 70 32 chr5 128620993 128621179 -74464353 + AluJo SINE Alu 4 196 -116 23 0 0 0 chr5 128621288 128621311 -74464221 + AT_rich Low_complexity Low_complexity 1 23 0 1755 168 0 14 chr5 128621311 128621602 -74463930 - AluJo SINE Alu -25 287 1 21 0 0 0 chr5 128621950 128621971 -74463561 + AT_rich Low_complexity Low_complexity 1 21 0 249 299 84 28 chr5 128622248 128622355 -74463177 - L2 LINE L2 -19 3253 3141 528 259 55 78 chr5 128622382 128622730 -74462802 + MLT1I LTR MaLR 66 405 -4 188 353 0 0 chr5 128622807 128622878 -74462654 - L2 LINE L2 -177 3095 3026 564 222 15 1 chr5 128622906 128623050 -74462482 + L1MC4 LINE L1 7438 7648 -226 2057 104 4 4 chr5 128623273 128623551 -74461981 + AluSx SINE Alu 18 295 -17 14329 29 4 10 chr5 128623923 128626136 -74459396 - L1P1 LINE L1 -459 5696 3499 563 149 11 0 chr5 128628271 128628358 -74457174 + AluJ/FLAM SINE Alu 12 99 -213 355 161 16 0 chr5 128628964 128629026 -74456506 + MER6 DNA MER2_type 1 63 -802 2195 138 21 3 chr5 128629044 128629420 -74456112 + MER6 DNA MER2_type 222 864 -1 779 161 0 27 chr5 128629739 128629888 -74455644 - AluJb SINE Alu 0 312 168 288 229 53 8 chr5 128630515 128630646 -74454886 - MER53 DNA DNA -40 149 13 706 184 38 6 chr5 128630889 128631047 -74454485 - L1MB8 LINE L1 -1 6177 6015 1212 130 37 9 chr5 128631091 128631306 -74454226 + MSTB-int LTR MaLR 1426 1646 -5 2383 158 44 5 chr5 128631312 128631722 -74453810 + MSTB LTR MaLR 1 426 0 602 219 26 13 chr5 128631722 128631873 -74453659 - L1MB8 LINE L1 -188 5990 5838 1258 198 0 0 chr5 128631875 128632077 -74453455 - AluJo SINE Alu -21 291 90 1081 199 99 0 chr5 128632084 128632411 -74453121 - L1MC4 LINE L1 -531 5653 5431 281 310 115 25 chr5 128632650 128632971 -74452561 + HAL1b LINE L1 300 527 -821 419 264 156 33 chr5 128633633 128633851 -74451681 + MIR SINE MIR 3 246 -16 23 78 0 0 chr5 128633854 128633905 -74451627 + AT_rich Low_complexity Low_complexity 1 51 0 247 369 126 23 chr5 128635058 128635359 -74450173 + L2 LINE L2 2456 2787 -527 378 0 0 0 chr5 128635656 128635698 -74449834 + (TG)n Simple_repeat Simple_repeat 2 43 0 184 333 16 0 chr5 128635743 128635806 -74449726 + L2 LINE L2 3209 3272 0 459 92 0 0 chr5 128635954 128636019 -74449513 + (TA)n Simple_repeat Simple_repeat 1 65 0 377 268 98 39 chr5 128637634 128637787 -74447745 - MIR3 SINE MIR -32 176 15 416 303 6 62 chr5 128637922 128638084 -74447448 + MER5A DNA MER1_type 7 159 -30 1741 181 0 23 chr5 128638237 128638536 -74446996 + AluJo SINE Alu 1 292 -20 1494 110 39 12 chr5 128638558 128638813 -74446719 + L1MA5A LINE L1 6032 6293 -4 1580 158 28 35 chr5 128639799 128640112 -74445420 + AluJb SINE Alu 1 311 0 381 328 132 30 chr5 128640195 128640634 -74444898 + MLT1K LTR MaLR 105 588 0 250 249 35 49 chr5 128640993 128641094 -74444438 + MIR SINE MIR 67 168 -40 1927 143 0 27 chr5 128641217 128641518 -74444014 - AluSx SINE Alu -19 293 1 465 237 35 0 chr5 128641594 128641708 -74443824 + MER63 DNA MER1_type 7 750 -312 227 274 110 0 chr5 128641702 128641775 -74443757 + MER63 DNA MER1_type 982 1062 0 * 717 232 0 26 chr5 128642658 128642848 -74442684 + L1MC4a LINE L1 5674 5858 -1950 1215 178 91 4 chr5 128643126 128643402 -74442130 - L1MB4 LINE L1 -1 6179 5880 826 289 140 23 chr5 128644127 128644477 -74441055 - L2 LINE L2 -1 3312 2922 211 333 33 11 chr5 128645047 128645137 -74440395 + MIR SINE MIR 18 109 -153 320 239 0 46 chr5 128645160 128645269 -74440263 + MLT1D-int LTR MaLR 1181 1284 -87 707 229 54 61 chr5 128645278 128645721 -74439811 + MLT1D LTR MaLR 1 496 -9 233 261 0 0 chr5 128645772 128645818 -74439714 + MIR SINE MIR 210 255 -7 370 289 87 29 chr5 128645991 128646233 -74439299 - MER102a DNA MER1_type 0 330 75 1037 40 56 0 chr5 128646423 128646549 -74438983 + AluYa5 SINE Alu 1 133 -178 2666 49 0 0 chr5 128646549 128646856 -74438676 + AluY SINE Alu 1 307 -4 4180 248 119 42 chr5 128648859 128650210 -74435322 + HAL1 LINE L1 2 1526 -981 1813 175 4 0 chr5 128650210 128650490 -74435042 - AluJb SINE Alu -31 281 1 4180 248 119 42 chr5 128650490 128650922 -74434610 + HAL1 LINE L1 1526 1923 -584 212 0 36 0 chr5 128650935 128650963 -74434569 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 232 289 124 41 chr5 128651142 128651239 -74434293 + MIR SINE MIR 37 141 -67 523 325 26 0 chr5 128652616 128652767 -74432765 + MIR SINE MIR 10 164 -98 182 247 91 13 chr5 128654320 128654397 -74431135 + L2 LINE L2 3230 3312 -1 2376 110 3 0 chr5 128654977 128655286 -74430246 + AluSq SINE Alu 1 310 -3 202 128 0 26 chr5 128656106 128656145 -74429387 + (CCA)n Simple_repeat Simple_repeat 1 38 0 237 288 92 59 chr5 128656946 128657099 -74428433 + MIR SINE MIR 11 168 -94 21 0 0 0 chr5 128659402 128659423 -74426109 + AT_rich Low_complexity Low_complexity 1 21 0 446 286 56 30 chr5 128660394 128660628 -74424904 - HAL1 LINE L1 -4 2503 2264 1453 222 62 13 chr5 128660677 128660942 -74424590 - L1ME LINE L1 -486 5680 5387 5126 109 32 7 chr5 128660942 128661701 -74423831 - LTR17 LTR ERV1 -2 778 1 1453 222 62 13 chr5 128661701 128661898 -74423634 - L1ME LINE L1 -779 5387 5201 1519 192 14 7 chr5 128661898 128662189 -74423343 - AluJo SINE Alu -14 298 6 1057 129 93 0 chr5 128662196 128662389 -74423143 - L1PA16 LINE L1 -8 6158 5948 281 354 55 33 chr5 128662777 128662958 -74422574 + L2 LINE L2 2568 2752 -562 665 251 248 59 chr5 128663791 128664429 -74421103 - L2 LINE L2 -8 3305 2508 1621 154 43 14 chr5 128664433 128664783 -74420749 - L1MA4 LINE L1 -6 6294 5935 * 6693 73 29 8 chr5 128664774 128666505 -74419027 - L1PA8 LINE L1 -15 6472 4717 2319 78 0 33 chr5 128666505 128666811 -74418721 - AluY SINE Alu -15 296 1 6693 73 29 8 chr5 128666811 128666923 -74418609 - L1PA8 LINE L1 -1770 4717 4609 7427 115 16 9 chr5 128666931 128668169 -74417363 - L1PA8 LINE L1 -3551 2910 1664 2272 152 45 5 chr5 128668175 128668571 -74416961 - L1PA8 LINE L1 -6047 414 3 3327 159 91 10 chr5 128668587 128669872 -74415660 - L1MA4 LINE L1 -359 5941 4559 245 322 105 35 chr5 128669974 128670145 -74415387 + L3 LINE CR1 1277 1459 -118 220 278 100 11 chr5 128670381 128670471 -74415061 + L2 LINE L2 3194 3291 -22 246 290 82 0 chr5 128670515 128670619 -74414913 - L1ME LINE L1 -517 5604 5493 426 231 137 22 chr5 128670646 128670845 -74414687 - L1ME LINE L1 -758 5388 5220 2244 95 0 29 chr5 128672038 128672353 -74413179 + AluSq SINE Alu 1 306 -7 28 48 0 0 chr5 128672561 128672603 -74412929 + AT_rich Low_complexity Low_complexity 1 42 0 1151 221 103 4 chr5 128672754 128673025 -74412507 - AluJo SINE Alu -4 298 1 282 56 0 0 chr5 128674772 128674808 -74410724 + (T)n Simple_repeat Simple_repeat 1 36 0 467 239 278 15 chr5 128675678 128675883 -74409649 + MIR SINE MIR 2 260 -2 184 342 145 8 chr5 128676108 128676225 -74409307 - L2 LINE L2 -20 3293 3161 292 200 53 0 chr5 128678370 128678445 -74407087 - MER116 DNA Mariner 0 80 2 1185 108 72 16 chr5 128679514 128679708 -74405824 + AluSg/x SINE Alu 108 312 0 394 224 89 66 chr5 128680340 128680599 -74404933 + L1ME LINE L1 5529 5793 -328 286 169 108 15 chr5 128680605 128680670 -74404862 + MIR SINE MIR 43 113 -149 1821 105 0 111 chr5 128681015 128681349 -74404183 + AluSc SINE Alu 1 297 -12 214 175 25 0 chr5 128681834 128681874 -74403658 + MER5B DNA MER1_type 3 43 -135 2387 80 0 0 chr5 128682504 128682805 -74402727 - AluSq SINE Alu -12 301 1 322 271 115 57 chr5 128684461 128684653 -74400879 - L1M2 LINE L1 -5874 975 773 307 259 93 62 chr5 128684600 128684762 -74400770 + L1M2 LINE L1 756 922 -5927 * 211 400 0 0 chr5 128686327 128686382 -74399150 + L2 LINE L2 3121 3175 -97 1130 257 133 26 chr5 128686416 128686836 -74398696 - L2 LINE L2 -10 3303 2839 265 315 0 36 chr5 128686854 128686965 -74398567 + L2 LINE L2 2941 3047 -225 2318 111 0 9 chr5 128687759 128688074 -74397458 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 128688283 128688312 -74397220 + AT_rich Low_complexity Low_complexity 1 29 0 769 189 0 0 chr5 128688386 128688518 -74397014 - FLAM_C SINE Alu -11 132 1 22 56 0 0 chr5 128688765 128688801 -74396731 + AT_rich Low_complexity Low_complexity 1 36 0 267 330 0 28 chr5 128689131 128689240 -74396292 - MLT1L LTR MaLR -84 531 426 24 0 0 0 chr5 128689521 128689545 -74395987 + AT_rich Low_complexity Low_complexity 1 24 0 1742 171 7 17 chr5 128689545 128689843 -74395689 + AluJb SINE Alu 1 295 -17 531 155 60 0 chr5 128689851 128689967 -74395565 - L1MA9 LINE L1 -10 6302 6180 1054 301 132 9 chr5 128691300 128691739 -74393793 - L2 LINE L2 -14 3299 2807 650 161 31 23 chr5 128691990 128692120 -74393412 + FLAM_A SINE Alu 2 132 -1 1914 171 28 8 chr5 128692556 128692947 -74392585 - L1MB3 LINE L1 -4 6179 5781 1843 188 15 28 chr5 128692953 128693415 -74392117 - LTR56 LTR ERV1 -2 435 6 2342 170 47 15 chr5 128693416 128694024 -74391508 - L1MB3 LINE L1 -402 5781 5155 225 65 0 0 chr5 128694038 128694069 -74391463 + (TTG)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr5 128694095 128694123 -74391409 + AT_rich Low_complexity Low_complexity 1 28 0 275 104 21 0 chr5 128694444 128694492 -74391040 - U5 snRNA snRNA -67 49 1 3994 213 27 13 chr5 128694649 128695953 -74389579 - L1MB7 LINE L1 -1 6183 4865 1766 167 107 22 chr5 128696123 128696488 -74389044 - MSTD LTR MaLR 0 396 1 239 371 0 10 chr5 128696805 128696902 -74388630 + L2 LINE L2 2072 2167 -1147 186 209 0 0 chr5 128697181 128697224 -74388308 + (TATG)n Simple_repeat Simple_repeat 2 44 0 405 0 0 0 chr5 128697228 128697273 -74388259 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1971 126 0 7 chr5 128697277 128697547 -74387985 - AluSx SINE Alu -44 268 1 1913 142 3 3 chr5 128697558 128697846 -74387686 - AluJb SINE Alu -22 290 3 1365 160 26 89 chr5 128698527 128698640 -74386892 - L1MA7 LINE L1 -1 6290 6171 1396 162 0 121 chr5 128698640 128698980 -74386552 - AluJo SINE Alu -12 300 2 1365 160 26 89 chr5 128698980 128699216 -74386316 - L1MA7 LINE L1 -120 6171 5963 745 254 12 67 chr5 128699482 128699722 -74385810 - MIR SINE MIR -15 247 21 1914 262 142 26 chr5 128699752 128701153 -74384379 - HAL1 LINE L1 -14 2493 856 751 59 0 0 chr5 128701153 128701254 -74384278 - L1PA8 LINE L1 0 6172 6072 1914 262 142 26 chr5 128701254 128701395 -74384137 - HAL1 LINE L1 -1651 856 733 250 194 28 28 chr5 128701428 128701500 -74384032 - MLT1J2 LTR MaLR -35 415 344 754 240 93 6 chr5 128701625 128701808 -74383724 + MER63A DNA MER1_type 12 210 0 486 227 123 25 chr5 128701808 128701940 -74383592 - MLT1J2 LTR MaLR -302 148 1 327 259 188 24 chr5 128701943 128702113 -74383419 - HAL1 LINE L1 -1787 720 523 1798 213 35 36 chr5 128702115 128702619 -74382913 - MLT1D LTR MaLR -3 489 1 889 298 73 11 chr5 128702691 128703060 -74382472 - HAL1 LINE L1 -2112 395 4 273 342 156 27 chr5 128703181 128703673 -74381859 - L2 LINE L2 0 3272 2713 1861 166 25 0 chr5 128703772 128704055 -74381477 - AluJb SINE Alu -22 290 1 900 130 8 0 chr5 128704076 128704207 -74381325 - FLAM_C SINE Alu 0 133 2 326 242 72 52 chr5 128704231 128704384 -74381148 - L1ME LINE L1 -332 5830 5675 14263 142 51 17 chr5 128704423 128705189 -74380343 + Tigger2 DNA MER2_type 32 771 -1947 2216 110 7 16 chr5 128705189 128705326 -74380206 + AluSx SINE Alu 1 138 -174 2196 95 23 0 chr5 128705326 128705631 -74379901 + AluSq SINE Alu 1 312 -1 2216 110 7 16 chr5 128705631 128705802 -74379730 + AluSx SINE Alu 138 306 -6 14263 142 51 17 chr5 128705802 128707634 -74377898 + Tigger2 DNA MER2_type 771 2718 0 527 281 47 8 chr5 128707729 128707985 -74377547 - L1ME LINE L1 -581 5581 5316 2274 100 3 0 chr5 128708012 128708303 -74377229 - AluSc SINE Alu -17 292 1 251 280 27 0 chr5 128708518 128708593 -74376939 + MIR3 SINE MIR 104 180 -28 494 239 33 7 chr5 128710149 128710292 -74375240 + MIR3 SINE MIR 23 174 -34 2109 127 0 0 chr5 128710806 128711097 -74374435 + AluSx SINE Alu 1 291 -21 439 149 11 11 chr5 128711097 128711191 -74374341 + GA-rich Low_complexity Low_complexity 3 96 0 432 304 234 26 chr5 128711619 128712004 -74373528 + L2 LINE L2 2807 3271 -1 22 56 0 0 chr5 128712375 128712411 -74373121 + AT_rich Low_complexity Low_complexity 1 36 0 2400 266 233 12 chr5 128712502 128712983 -74372549 + L2 LINE L2 78 451 -2863 2309 208 50 12 chr5 128712983 128713483 -74372049 - LTR40a LTR ERVL 0 519 1 2400 266 233 12 chr5 128713483 128714095 -74371437 + L2 LINE L2 451 1413 -1901 1381 181 118 0 chr5 128714234 128714504 -74371028 + AluJb SINE Alu 1 302 -10 535 234 38 38 chr5 128717068 128717226 -74368306 + MIR SINE MIR 51 208 -54 656 301 46 18 chr5 128718254 128718473 -74367059 + MIR SINE MIR 16 240 -22 2194 214 60 25 chr5 128718705 128719383 -74366149 - L1MC4a LINE L1 -83 7725 7024 29444 113 10 59 chr5 128719400 128725873 -74359659 - L1PA7 LINE L1 -11 6143 1 24 32 0 0 chr5 128726368 128726399 -74359133 + AT_rich Low_complexity Low_complexity 1 31 0 1708 114 0 42 chr5 128726535 128726798 -74358734 + AluSg SINE Alu 50 301 -9 2287 176 31 84 chr5 128727364 128727948 -74357584 - MLT2B3 LTR ERVL 0 554 2 253 226 57 9 chr5 128728105 128728211 -74357321 + L1ME4a LINE L1 5992 6102 -19 422 303 120 11 chr5 128728245 128728420 -74357112 + MIR SINE MIR 28 221 -41 428 117 0 0 chr5 128728442 128728502 -74357030 - MER8 DNA MER2_type -1 238 179 2466 132 45 5 chr5 128728505 128728929 -74356603 + Tigger2 DNA MER2_type 2278 2718 0 202 152 0 0 chr5 128729095 128729128 -74356404 + MIR SINE MIR 218 250 -12 726 262 116 0 chr5 128729779 128730004 -74355528 - MIR SINE MIR 0 262 12 21 57 0 0 chr5 128730743 128730778 -74354754 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr5 128730961 128731000 -74354532 + AT_rich Low_complexity Low_complexity 1 39 0 318 354 147 25 chr5 128731058 128731256 -74354276 - MIR SINE MIR -39 223 2 822 287 43 14 chr5 128731563 128731908 -74353624 + L1ME3A LINE L1 4945 5299 -847 756 149 0 0 chr5 128731916 128732030 -74353502 + FLAM_A SINE Alu 21 134 -8 2097 284 63 16 chr5 128732036 128732849 -74352683 + L1ME3A LINE L1 5316 6166 -4 1360 211 85 5 chr5 128733444 128733795 -74351737 - MER21B LTR ERV1 -28 903 448 2910 85 0 0 chr5 128733795 128734171 -74351361 + THE1-int LTR MaLR 930 1305 -275 6548 94 27 18 chr5 128734175 128735168 -74350364 + L1MA2 LINE L1 5303 6304 0 2098 176 111 26 chr5 128735168 128735635 -74349897 + Tigger2 DNA MER2_type 349 855 -1863 709 205 80 0 chr5 128735632 128735783 -74349749 + Tigger2 DNA MER2_type 2546 2708 -10 * 253 268 0 14 chr5 128736039 128736110 -74349422 - MER94 DNA DNA -64 70 1 1774 242 124 49 chr5 128736212 128736766 -74348766 - MER77 LTR ERV1 0 605 10 256 192 96 55 chr5 128736766 128736839 -74348693 - MIR SINE MIR -167 95 20 240 304 216 0 chr5 128737487 128737589 -74347943 - L2 LINE L2 -33 3239 3116 253 351 77 31 chr5 128737900 128738122 -74347410 - L2 LINE L2 -609 2705 2474 366 259 19 9 chr5 128738319 128738427 -74347105 - L1ME1 LINE L1 -5 6161 6053 1889 163 0 3 chr5 128738700 128738995 -74346537 + AluJb SINE Alu 3 296 -16 298 237 74 70 chr5 128739270 128739485 -74346047 - L1ME4a LINE L1 -44 6077 5862 24 67 0 0 chr5 128739658 128739703 -74345829 + AT_rich Low_complexity Low_complexity 1 45 0 2315 70 7 10 chr5 128739764 128740063 -74345469 - AluY SINE Alu -13 298 1 635 283 120 11 chr5 128740180 128740371 -74345161 - MLT1I LTR MaLR -2 407 196 905 217 20 29 chr5 128740606 128740981 -74344551 - LTR52 LTR ERVL -6 415 1 743 167 23 0 chr5 128741655 128741787 -74343745 - AluJo SINE Alu -177 135 1 1080 232 34 89 chr5 128742359 128742833 -74342699 - L1MC5 LINE L1 -881 7080 6633 1111 220 26 103 chr5 128742835 128743176 -74342356 - L1MC4a LINE L1 -1022 6786 6472 195 42 0 0 chr5 128743591 128743615 -74341917 + (T)n Simple_repeat Simple_repeat 1 24 0 1451 174 98 11 chr5 128743755 128744030 -74341502 - AluJb SINE Alu -13 299 1 591 318 52 19 chr5 128744157 128744368 -74341164 - MIR SINE MIR -39 223 6 387 308 163 9 chr5 128744766 128744987 -74340545 - MIR SINE MIR 0 262 8 1525 113 20 60 chr5 128746047 128746295 -74339237 + AluSx SINE Alu 60 297 -15 919 55 78 0 chr5 128747225 128747353 -74338179 - MER85 DNA T2_type -1 138 1 1895 150 0 10 chr5 128748075 128748381 -74337151 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr5 128748431 128748453 -74337079 + AT_rich Low_complexity Low_complexity 1 22 0 1951 136 32 30 chr5 128751970 128752184 -74333348 - MER44D DNA MER2_type -1882 609 397 1656 160 26 33 chr5 128752184 128752490 -74333042 + AluJo SINE Alu 1 304 -8 1951 136 32 30 chr5 128752490 128752613 -74332919 - MER44D DNA MER2_type -2094 397 1 28 0 0 0 chr5 128753381 128753409 -74332123 + AT_rich Low_complexity Low_complexity 1 28 0 203 152 0 0 chr5 128753525 128753558 -74331974 + (CA)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr5 128754347 128754373 -74331159 + AT_rich Low_complexity Low_complexity 1 26 0 2440 40 37 0 chr5 128757057 128757357 -74328175 - AluY SINE Alu 0 311 1 1104 251 108 39 chr5 128757658 128758092 -74327440 - L2 LINE L2 -1 3312 2849 510 292 203 34 chr5 128758205 128758589 -74326943 + HAL1 LINE L1 2 450 -2057 1097 267 34 37 chr5 128758616 128758942 -74326590 + HAL1 LINE L1 579 903 -1604 274 274 51 26 chr5 128759394 128759511 -74326021 + LTR16A1 LTR ERVL 335 454 -3 1902 247 111 50 chr5 128759535 128759905 -74325627 + HAL1 LINE L1 1016 1362 -1145 1888 169 46 6 chr5 128759905 128760255 -74325277 - MLT1A1 LTR MaLR 0 365 2 1902 247 111 50 chr5 128760255 128760733 -74324799 + HAL1 LINE L1 1362 1916 -591 2041 143 0 3 chr5 128760739 128761032 -74324500 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr5 128761032 128761060 -74324472 + AT_rich Low_complexity Low_complexity 1 28 0 286 229 0 0 chr5 128761137 128761185 -74324347 - Tigger2a DNA MER2_type -1 433 386 991 139 48 6 chr5 128761189 128761354 -74324178 - Tigger2a DNA MER2_type -262 172 1 577 301 88 40 chr5 128761654 128762155 -74323377 + L1MC4a LINE L1 5257 5781 -2027 642 286 24 5 chr5 128762155 128762365 -74323167 + L1MC4a LINE L1 5699 5912 -1896 1453 243 48 42 chr5 128762424 128762901 -74322631 - MLT2B1 LTR ERVL -40 480 1 1866 156 0 3 chr5 128762998 128763281 -74322251 - AluJb SINE Alu -30 282 1 909 265 103 29 chr5 128763724 128764064 -74321468 + LTR16A LTR ERVL 76 440 -10 1262 259 82 33 chr5 128764072 128764104 -74321428 + HERV16 LTR ERVL 1 30 -4966 2440 72 13 0 chr5 128764104 128764409 -74321123 - AluSp SINE Alu -4 309 1 1262 259 82 33 chr5 128764409 128764804 -74320728 + HERV16 LTR ERVL 30 449 -4547 471 267 115 55 chr5 128764932 128765149 -74320383 + HERV16 LTR ERVL 986 1215 -3781 * 3374 306 71 19 chr5 128765135 128767048 -74318484 + HERV16 LTR ERVL 1340 3334 -2320 2565 316 44 32 chr5 128767252 128768495 -74317037 + HERV16 LTR ERVL 3770 5027 -737 234 0 0 0 chr5 128768738 128768764 -74316768 + (TA)n Simple_repeat Simple_repeat 2 27 0 2253 101 0 7 chr5 128768904 128769212 -74316320 + AluSc SINE Alu 1 306 -3 460 306 143 19 chr5 128769340 128769549 -74315983 + MIR SINE MIR 14 248 -14 1000 141 23 23 chr5 128770838 128771015 -74314517 - MER20 DNA MER1_type 0 219 43 315 240 130 65 chr5 128771614 128771768 -74313764 - MER112 DNA MER1_type -32 228 65 2696 72 55 0 chr5 128771788 128772150 -74313382 - MER41A LTR ERV1 0 554 173 1637 179 65 34 chr5 128772159 128772512 -74313020 - LTR10A LTR ERV1 -61 548 185 273 257 99 99 chr5 128772570 128772873 -74312659 - LTR10A LTR ERV1 -306 303 1 1423 51 0 0 chr5 128772873 128773049 -74312483 - MER41A LTR ERV1 -378 176 1 258 313 0 0 chr5 128773050 128773117 -74312415 - MER112 DNA MER1_type -193 67 1 1791 218 56 28 chr5 128773168 128773631 -74311901 - MLT1D LTR MaLR -2 503 28 219 341 34 0 chr5 128773956 128774044 -74311488 - MIR3 SINE MIR -19 189 99 2230 212 52 62 chr5 128774206 128774865 -74310667 + MLT1E1 LTR MaLR 1 652 -2 905 219 45 13 chr5 128774943 128775167 -74310365 + L1ME1 LINE L1 5834 6064 -102 24 0 0 0 chr5 128775647 128775671 -74309861 + AT_rich Low_complexity Low_complexity 1 24 0 556 333 69 55 chr5 128777589 128778010 -74307522 + HAL1b LINE L1 4 430 -918 634 159 14 6 chr5 128778024 128778166 -74307366 + L1MC3 LINE L1 6517 6618 -1167 4016 150 48 99 chr5 128778204 128779164 -74306368 + MER21A LTR ERV1 21 931 0 4727 185 82 28 chr5 128779166 128779568 -74305964 + L1MC3 LINE L1 6616 6995 -790 230 93 0 23 chr5 128779568 128779611 -74305921 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4727 185 82 28 chr5 128779611 128780318 -74305214 + L1MC3 LINE L1 6995 7785 0 207 114 0 0 chr5 128780797 128780832 -74304700 + (A)n Simple_repeat Simple_repeat 1 35 0 3294 128 54 4 chr5 128781197 128781735 -74303797 + MER34B LTR ERV1 1 565 0 235 250 0 56 chr5 128781811 128781883 -74303649 - MIR3 SINE MIR -15 193 126 1961 147 7 0 chr5 128781903 128782195 -74303337 - AluSx SINE Alu -12 300 7 198 254 17 51 chr5 128782396 128782455 -74303077 - L2 LINE L2 -12 3260 3204 2547 59 0 0 chr5 128782982 128783287 -74302245 - AluSg SINE Alu -5 305 1 13597 54 3 2 chr5 128783944 128786460 -74299072 - L1PA6 LINE L1 0 6154 3637 229 292 62 0 chr5 128786667 128786763 -74298769 - L1MC/D LINE L1 -2001 5807 5706 357 206 0 55 chr5 128787054 128787127 -74298405 + L2 LINE L2 3245 3313 0 1021 254 117 41 chr5 128787282 128787700 -74297832 + LTR16A LTR ERVL 1 450 0 2299 96 0 3 chr5 128787870 128788173 -74297359 - AluY SINE Alu -9 302 1 490 194 27 18 chr5 128789237 128789385 -74296147 + MLT1J2 LTR MaLR 60 208 -201 614 151 0 0 chr5 128791133 128791226 -74294306 - L1MC1 LINE L1 0 6333 6241 1681 135 10 3 chr5 128791244 128791533 -74293999 - L1MC1 LINE L1 -155 6178 5888 265 292 80 62 chr5 128791573 128791686 -74293846 + MIR3 SINE MIR 78 192 -16 1713 156 6 77 chr5 128792724 128793050 -74292482 - AluJo SINE Alu -9 303 1 3505 179 17 7 chr5 128793074 128793765 -74291767 - L1MB8 LINE L1 -9 6169 5472 1718 98 15 4 chr5 128794456 128794721 -74290811 + MER65A LTR ERV1 178 445 0 535 338 90 5 chr5 128794837 128795059 -74290473 - MIR SINE MIR -13 249 9 576 286 39 43 chr5 128796485 128796716 -74288816 + MIR SINE MIR 13 242 -20 208 147 0 0 chr5 128797218 128797252 -74288280 + (TA)n Simple_repeat Simple_repeat 2 35 0 228 278 28 46 chr5 128797998 128798106 -74287426 + MIR3 SINE MIR 9 114 -94 327 385 16 0 chr5 128798321 128798443 -74287089 - L2 LINE L2 -15 3257 3134 1618 309 117 44 chr5 128798465 128799452 -74286080 - L2 LINE L2 -674 2640 1528 2122 96 3 35 chr5 128799452 128799765 -74285767 + AluSg SINE Alu 1 303 -7 1618 309 117 44 chr5 128799765 128800120 -74285412 - L2 LINE L2 -1786 1528 1200 2678 196 17 75 chr5 128800175 128800900 -74284632 + LTR8 LTR ERV1 1 683 -8 590 288 19 16 chr5 128801161 128801418 -74284114 + L1MC4a LINE L1 5776 6033 -1775 2802 122 6 43 chr5 128801457 128801941 -74283591 + L1PB1 LINE L1 5678 6143 -8 23 33 0 0 chr5 128801941 128801971 -74283561 + AT_rich Low_complexity Low_complexity 1 30 0 317 177 0 0 chr5 128802240 128802302 -74283230 - MER20 DNA MER1_type 0 219 158 674 193 48 64 chr5 128802317 128802504 -74283028 - MER20 DNA MER1_type -35 184 1 21 0 0 0 chr5 128803168 128803189 -74282343 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr5 128803526 128803562 -74281970 + (CA)n Simple_repeat Simple_repeat 2 37 0 920 67 22 15 chr5 128805661 128805796 -74279736 - L1PA5 LINE L1 -1 6153 6018 803 46 0 0 chr5 128805796 128805904 -74279628 + L1PA5 LINE L1 5878 5985 -169 322 164 33 0 chr5 128806160 128806221 -74279311 + MER5A DNA MER1_type 9 71 -118 426 222 167 21 chr5 128807184 128807328 -74278204 + MIR SINE MIR 27 191 -71 1013 104 60 22 chr5 128807485 128807668 -74277864 + L1MB2 LINE L1 5980 6169 -2 181 370 14 27 chr5 128807695 128807768 -74277764 + MER5A DNA MER1_type 100 171 -18 1886 111 77 52 chr5 128807779 128808141 -74277391 + THE1C LTR MaLR 3 373 -2 4347 203 57 46 chr5 128808162 128808721 -74276811 - L1MD1 LINE L1 -11 6300 5749 507 200 29 0 chr5 128808721 128808826 -74276706 - FLAM_C SINE Alu -14 129 22 4347 203 57 46 chr5 128808826 128810628 -74274904 - L1MD1 LINE L1 -562 5749 3890 865 201 0 0 chr5 128810640 128810784 -74274748 - FRAM SINE Alu -11 165 22 305 301 10 0 chr5 128810949 128811052 -74274480 - LTR16C LTR ERVL -29 462 359 984 248 44 37 chr5 128811382 128811718 -74273814 - L1MD1 LINE L1 -5013 1383 1040 2334 89 0 10 chr5 128811718 128812020 -74273512 + AluY SINE Alu 1 299 -12 984 248 44 37 chr5 128812020 128812255 -74273277 - L1MD1 LINE L1 -5356 1040 808 2901 227 58 30 chr5 128812261 128812584 -74272948 - L1ME1 LINE L1 -5 6230 5917 2211 107 3 17 chr5 128812584 128812883 -74272649 - AluSc SINE Alu -10 299 5 2901 227 58 30 chr5 128812883 128814194 -74271338 - L1ME1 LINE L1 -318 5917 4554 286 229 0 0 chr5 128814196 128814257 -74271275 - L1ME LINE L1 -432 5801 5741 588 229 29 11 chr5 128814294 128814469 -74271063 + L1M4 LINE L1 5056 5233 -913 3165 244 34 35 chr5 128814486 128815134 -74270398 - L1ME1 LINE L1 -1677 4538 3890 1901 171 0 7 chr5 128815134 128815432 -74270100 - AluJb SINE Alu -16 296 1 3165 244 34 35 chr5 128815432 128815994 -74269538 - L1ME1 LINE L1 -2325 3890 3329 216 231 141 13 chr5 128815994 128816072 -74269460 + MIR SINE MIR 35 122 -86 319 341 54 8 chr5 128816383 128816512 -74269020 - L1ME LINE L1 -2140 5668 5534 1029 214 42 16 chr5 128818558 128818936 -74266596 - L1ME1 LINE L1 -2909 3306 2919 1383 300 34 44 chr5 128818948 128819749 -74265783 - L1ME1 LINE L1 -5581 815 23 308 314 115 0 chr5 128819869 128820025 -74265507 + MIR3 SINE MIR 24 197 -11 311 324 141 24 chr5 128823135 128823305 -74262227 - MIR3 SINE MIR -3 205 16 187 231 0 77 chr5 128823590 128823642 -74261890 - L3 LINE CR1 -631 946 899 1844 79 34 21 chr5 128823644 128823935 -74261597 - L1MA2 LINE L1 0 6304 6010 244 285 64 76 chr5 128824121 128824293 -74261239 - MIR SINE MIR -86 176 7 22 0 0 0 chr5 128825449 128825471 -74260061 + AT_rich Low_complexity Low_complexity 1 22 0 410 251 112 45 chr5 128825915 128826094 -74259438 + Charlie8 DNA MER1_type 10 200 -2217 239 62 0 0 chr5 128826299 128826331 -74259201 + Charlie8 DNA MER1_type 1391 1422 -995 1438 269 42 5 chr5 128827413 128827840 -74257692 - LTR47B LTR ERVL 0 443 1 391 320 146 21 chr5 128831118 128831446 -74254086 + L2 LINE L2 2434 2802 -512 267 258 150 18 chr5 128831499 128831666 -74253866 + L2 LINE L2 2869 3057 -215 189 0 0 0 chr5 128832112 128832133 -74253399 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 1895 160 0 0 chr5 128832786 128833074 -74252458 - AluSx SINE Alu -24 288 1 3775 176 45 4 chr5 128833089 128834126 -74251406 - L1MC2 LINE L1 -13 6331 5237 349 246 92 69 chr5 128836086 128836403 -74249129 - L1ME4a LINE L1 0 6121 5798 1971 142 0 0 chr5 128836493 128836775 -74248757 - AluJb SINE Alu -30 282 1 334 243 65 37 chr5 128837712 128837819 -74247713 - MIR SINE MIR -120 142 33 954 263 33 21 chr5 128837863 128838106 -74247426 - MIR SINE MIR -12 250 5 234 0 0 0 chr5 128838150 128838176 -74247356 + (TG)n Simple_repeat Simple_repeat 2 27 0 276 228 38 13 chr5 128839026 128839105 -74246427 + MIR SINE MIR 64 144 -118 581 321 41 16 chr5 128839284 128839530 -74246002 - MIR SINE MIR -10 252 1 1609 202 14 0 chr5 128839590 128839882 -74245650 + AluJo SINE Alu 7 302 -10 403 273 15 30 chr5 128840251 128840383 -74245149 + L1ME4a LINE L1 5684 5813 -308 352 245 20 10 chr5 128840646 128840748 -74244784 + L1ME4a LINE L1 5959 6061 -60 474 250 235 0 chr5 128840868 128841004 -74244528 + MER5A DNA MER1_type 15 182 -7 23 0 0 0 chr5 128841423 128841446 -74244086 + AT_rich Low_complexity Low_complexity 1 23 0 322 254 51 85 chr5 128842977 128843095 -74242437 + L2 LINE L2 3159 3272 0 333 341 79 6 chr5 128843941 128844105 -74241427 + MIR SINE MIR 18 193 -69 24 0 0 0 chr5 128845602 128845626 -74239906 + AT_rich Low_complexity Low_complexity 1 24 0 2655 39 3 0 chr5 128845772 128846082 -74239450 - AluY SINE Alu 0 311 1 331 292 74 27 chr5 128846154 128846332 -74239200 + MIR SINE MIR 67 254 -8 449 232 46 33 chr5 128846933 128847084 -74238448 + MIR SINE MIR 108 260 -2 23 0 0 0 chr5 128848443 128848466 -74237066 + AT_rich Low_complexity Low_complexity 1 23 0 208 289 53 0 chr5 128848912 128848988 -74236544 + L2 LINE L2 3187 3266 -6 576 338 106 22 chr5 128849075 128849539 -74235993 + L2 LINE L2 2349 2851 -463 232 289 62 0 chr5 128849612 128849709 -74235823 + L2 LINE L2 2957 3059 -213 14728 127 30 13 chr5 128849867 128850262 -74235270 + Tigger1 DNA MER2_type 1 388 -2030 2302 96 0 10 chr5 128850262 128850574 -74234958 + AluY SINE Alu 1 309 -2 14728 127 30 13 chr5 128850574 128852555 -74232977 + Tigger1 DNA MER2_type 388 2418 0 198 0 0 0 chr5 128853207 128853229 -74232303 + (TA)n Simple_repeat Simple_repeat 2 23 0 463 308 65 0 chr5 128854266 128854451 -74231081 - MIR SINE MIR -1 261 65 276 227 15 0 chr5 128858823 128858889 -74226643 - MER103 DNA DNA -48 118 52 347 260 227 7 chr5 128859844 128859998 -74225534 + MIR SINE MIR 75 262 0 900 153 0 0 chr5 128860186 128860317 -74225215 + AluJo SINE Alu 6 136 -176 215 333 88 3 chr5 128860385 128860490 -74225042 - MIR SINE MIR -101 107 16 2187 75 3 24 chr5 128860599 128860891 -74224641 + AluSp SINE Alu 10 295 -18 634 176 61 0 chr5 128861052 128861183 -74224349 - L1MC1 LINE L1 -6 6327 6189 1682 142 12 147 chr5 128861184 128861586 -74223946 - MER7A DNA MER2_type 0 346 1 810 178 0 37 chr5 128861589 128861752 -74223780 - L1MC1 LINE L1 -147 6186 6030 22 0 0 0 chr5 128864256 128864278 -74221254 + AT_rich Low_complexity Low_complexity 1 22 0 186 341 59 30 chr5 128864965 128865100 -74220432 + L2 LINE L2 2721 2859 -455 258 370 33 92 chr5 128865135 128865494 -74220038 + L2 LINE L2 2856 3193 -79 811 256 142 44 chr5 128865505 128865849 -74219683 - MLT1K LTR MaLR -164 424 47 416 238 90 37 chr5 128865898 128866302 -74219230 + L1ME1 LINE L1 5422 5891 -275 304 308 0 0 chr5 128866342 128866459 -74219073 + L1MA10 LINE L1 6215 6331 -3 219 193 22 82 chr5 128869906 128869956 -74215576 + CT-rich Low_complexity Low_complexity 4 55 -75 1989 186 37 8 chr5 128869956 128870338 -74215194 - MSTD LTR MaLR 0 396 4 219 193 22 82 chr5 128870338 128870422 -74215110 + CT-rich Low_complexity Low_complexity 55 130 0 606 198 59 63 chr5 128872008 128872246 -74213286 + L1MC4 LINE L1 6467 6703 -1339 415 56 0 0 chr5 128872249 128872303 -74213229 + MADE1 DNA Mariner 27 80 0 339 45 0 0 chr5 128872357 128872401 -74213131 - MADE1 DNA Mariner -36 44 1 1617 228 108 26 chr5 128872413 128872454 -74213078 + L1MC4 LINE L1 6707 6743 -1299 1725 172 26 69 chr5 128872454 128872844 -74212688 + MLT1A2 LTR MaLR 2 374 0 1617 228 108 26 chr5 128872844 128873755 -74211777 + L1MC4 LINE L1 6743 7911 -131 454 228 0 0 chr5 128874322 128874401 -74211131 + Tigger7 DNA MER2_type 2 80 -2407 * 978 179 220 0 chr5 128874398 128874621 -74210911 - Tigger7 DNA MER2_type -2140 347 76 * 1930 138 12 12 chr5 128874618 128874937 -74210595 + Tigger7 DNA MER2_type 2242 2560 -27 1811 158 0 7 chr5 128874989 128875292 -74210240 - AluJb SINE Alu -11 301 1 1757 167 78 6 chr5 128875386 128875721 -74209811 + MER47A DNA MER2_type 8 366 0 259 181 188 83 chr5 128876941 128877074 -74208458 - LTR50 LTR ERVL -5 790 644 334 318 0 0 chr5 128877189 128877296 -74208236 - ERVL LTR ERVL -5143 621 515 1607 222 175 36 chr5 128877648 128878295 -74207237 - LTR50 LTR ERVL -19 688 13 193 231 0 0 chr5 128879461 128879500 -74206032 + MIR3 SINE MIR 151 189 -19 183 42 0 0 chr5 128879758 128879782 -74205750 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 24 32 0 0 chr5 128879875 128879906 -74205626 + AT_rich Low_complexity Low_complexity 1 31 0 328 294 47 0 chr5 128881933 128882103 -74203429 + L1M4 LINE L1 3264 3441 -2705 387 235 52 0 chr5 128882306 128882421 -74203111 - L1ME LINE L1 -429 5692 5572 210 196 20 0 chr5 128882774 128882825 -74202707 + (TAA)n Simple_repeat Simple_repeat 1 52 0 1997 57 15 34 chr5 128882921 128883186 -74202346 + AluY SINE Alu 38 297 -14 1162 197 65 20 chr5 128883204 128883498 -74202034 - L1MC2 LINE L1 -5 6339 6033 1900 167 0 7 chr5 128884030 128884323 -74201209 - AluJb SINE Alu -21 291 1 187 337 139 10 chr5 128884434 128884535 -74200997 + L2 LINE L2 3122 3235 -37 768 189 45 96 chr5 128885015 128885306 -74200226 - L1MC2 LINE L1 -1859 5949 5674 606 39 13 0 chr5 128885365 128885442 -74200090 - MADE1 DNA Mariner 0 80 3 267 217 0 0 chr5 128886658 128886718 -74198814 + (TA)n Simple_repeat Simple_repeat 1 60 0 342 0 0 0 chr5 128887938 128887976 -74197556 + (TG)n Simple_repeat Simple_repeat 2 39 0 1156 242 58 29 chr5 128888979 128889355 -74196177 + MLT1B LTR MaLR 4 390 0 235 321 92 18 chr5 128889582 128889691 -74195841 + MIR SINE MIR 21 137 -71 2999 131 30 18 chr5 128889691 128890196 -74195336 - MER39B LTR ERV1 -142 511 1 964 227 81 7 chr5 128890596 128890869 -74194663 - Charlie4a DNA MER1_type -5 503 211 399 192 13 0 chr5 128891189 128891267 -74194265 + Tigger5 DNA MER2_type 2242 2320 -3 365 175 0 0 chr5 128891267 128891330 -74194202 - Tigger5 DNA MER2_type -2259 64 2 24 0 0 0 chr5 128891650 128891674 -74193858 + AT_rich Low_complexity Low_complexity 1 24 0 853 183 0 12 chr5 128891674 128891838 -74193694 - L1PA16 LINE L1 -1 6165 6004 1403 144 83 6 chr5 128892333 128892659 -74192873 - L1PA16 LINE L1 0 6166 5781 472 143 10 0 chr5 128892654 128892753 -74192779 + L1P4 LINE L1 5527 5628 -528 * 369 0 0 0 chr5 128892971 128893012 -74192520 + (TC)n Simple_repeat Simple_repeat 2 42 0 333 100 0 0 chr5 128893013 128893063 -74192469 + (CA)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr5 128894032 128894055 -74191477 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 768 249 99 4 chr5 128894556 128894789 -74190743 - MIR SINE MIR -5 257 3 1893 145 0 23 chr5 128895267 128895577 -74189955 + AluJb SINE Alu 10 312 0 2197 102 0 0 chr5 128896746 128897064 -74188468 + AluY SINE Alu 1 318 0 348 241 112 5 chr5 128897081 128897305 -74188227 + L1ME3A LINE L1 5122 5369 -777 635 263 90 43 chr5 128897419 128897756 -74187776 + L1ME3A LINE L1 5546 5860 -310 195 42 0 0 chr5 128897824 128897848 -74187684 + (TA)n Simple_repeat Simple_repeat 1 24 0 7387 39 2 0 chr5 128897849 128899106 -74186426 - L1PA5 LINE L1 -5 6149 4892 2313 50 0 0 chr5 128899106 128899408 -74186124 + L1P LINE L1 3624 3925 -2221 677 172 204 6 chr5 128902006 128902163 -74183369 - MER5A DNA MER1_type 0 189 2 298 77 0 0 chr5 128902202 128902241 -74183291 - U4 snRNA snRNA -106 39 1 23 92 0 0 chr5 128902264 128902329 -74183203 + AT_rich Low_complexity Low_complexity 1 65 0 2068 113 7 3 chr5 128902350 128902650 -74182882 - AluSx SINE Alu -11 301 1 201 277 0 0 chr5 128903165 128903212 -74182320 - MIR3 SINE MIR -6 202 156 360 312 0 0 chr5 128903221 128903330 -74182202 - L2 LINE L2 -6 3307 3199 268 287 23 11 chr5 128903374 128903461 -74182071 - MIR SINE MIR -123 139 52 301 352 0 16 chr5 128903535 128903663 -74181869 + MER5A DNA MER1_type 64 189 0 23 33 0 0 chr5 128904008 128904038 -74181494 + AT_rich Low_complexity Low_complexity 1 30 0 295 318 16 48 chr5 128904652 128904778 -74180754 + MER91C DNA MER1_type 1 122 -18 224 174 130 0 chr5 128904811 128904857 -74180675 - MIR SINE MIR -8 254 203 745 308 54 67 chr5 128905419 128905918 -74179614 - L2 LINE L2 0 3272 2792 1977 129 3 26 chr5 128905918 128906227 -74179305 + AluJo SINE Alu 1 302 -10 745 308 54 67 chr5 128906227 128906359 -74179173 - L2 LINE L2 -480 2792 2660 223 322 28 56 chr5 128906361 128906504 -74179028 - L2 LINE L2 -804 2510 2372 2036 179 49 15 chr5 128906504 128907118 -74178414 - L1MC/D LINE L1 -596 6040 5385 2543 44 7 0 chr5 128907118 128907415 -74178117 - AluY SINE Alu -12 299 1 2036 179 49 15 chr5 128907415 128907654 -74177878 - L1MC/D LINE L1 -1251 5385 5156 1621 120 21 34 chr5 128907712 128908003 -74177529 - Tigger2a DNA MER2_type -147 287 1 1458 258 24 74 chr5 128908004 128908718 -74176814 - L1MC/D LINE L1 -1405 5135 4458 364 201 236 0 chr5 128908724 128908868 -74176664 - L1MC/D LINE L1 -4687 1853 1676 2062 198 21 46 chr5 128908882 128909363 -74176169 - L1MC/D LINE L1 -6054 486 18 238 293 72 36 chr5 128909360 128909527 -74176005 - L1 LINE L1 -2468 4072 3900 * 25 0 0 0 chr5 128909745 128909770 -74175762 + AT_rich Low_complexity Low_complexity 1 25 0 1690 148 23 43 chr5 128910588 128910891 -74174641 - AluJo SINE Alu -14 298 2 181 61 0 61 chr5 128911052 128911085 -74174447 - MER5C DNA MER1_type -6 318 288 479 202 62 16 chr5 128911680 128911809 -74173723 - MER76 LTR ERV -2 686 552 311 284 11 32 chr5 128911812 128911907 -74173625 + MIR SINE MIR 170 262 0 256 248 113 68 chr5 128911971 128912104 -74173428 + L2 LINE L2 3172 3310 -3 615 221 0 0 chr5 128912233 128912346 -74173186 + FLAM_A SINE Alu 3 115 -18 876 222 57 0 chr5 128912561 128912773 -74172759 - LTR16A LTR ERVL 0 450 227 743 245 25 5 chr5 128912787 128912983 -74172549 - MER63A DNA MER1_type 0 210 11 513 257 40 17 chr5 128912973 128913148 -74172384 - LTR16A LTR ERVL -253 197 19 * 4395 188 44 26 chr5 128913298 128914354 -74171178 - L1MC3 LINE L1 -7 7778 6704 26 30 0 0 chr5 128915595 128915628 -74169904 + AT_rich Low_complexity Low_complexity 1 33 0 233 292 21 0 chr5 128915982 128916078 -74169454 - HAL1b LINE L1 -277 1071 974 1826 88 0 0 chr5 128916326 128916554 -74168978 + AluY SINE Alu 1 228 -83 21 71 0 0 chr5 128916614 128916656 -74168876 + AT_rich Low_complexity Low_complexity 1 42 0 255 125 0 0 chr5 128916656 128916704 -74168828 - L1MA3 LINE L1 0 6305 6258 456 296 115 21 chr5 128916743 128917081 -74168451 - HAL1b LINE L1 -466 882 513 447 282 9 32 chr5 128917102 128917318 -74168214 - HAL1b LINE L1 -915 433 223 1682 183 39 34 chr5 128917335 128917394 -74168138 - LTR52 LTR ERVL -2 419 362 2169 141 37 8 chr5 128917394 128917748 -74167784 + THE1B LTR MaLR 1 364 0 1682 183 39 34 chr5 128917748 128918103 -74167429 - LTR52 LTR ERVL -59 362 3 2461 91 0 0 chr5 128919947 128920256 -74165276 - AluSc SINE Alu 0 309 1 12087 104 16 28 chr5 128922102 128924924 -74160608 + L1P3 LINE L1 3 2850 -3611 371 278 32 32 chr5 128925186 128925312 -74160220 - MIR SINE MIR -56 206 81 392 178 151 0 chr5 128926464 128926537 -74158995 + L2 LINE L2 3205 3288 -25 234 329 13 20 chr5 128926878 128927027 -74158505 + (TA)n Simple_repeat Simple_repeat 2 149 0 180 0 0 0 chr5 128927406 128927426 -74158106 + (GGGTG)n Simple_repeat Simple_repeat 4 23 0 536 287 93 13 chr5 128927685 128927995 -74157537 - MER113 DNA MER1_type? -151 370 36 2520 84 50 0 chr5 128928105 128928464 -74157068 - MER51B LTR ERV1 0 377 1 401 123 0 0 chr5 128928599 128928656 -74156876 + AluS SINE Alu 6 62 -249 1982 118 0 3 chr5 128928664 128928952 -74156580 - AluSq SINE Alu -18 295 9 1477 149 5 0 chr5 128928960 128929181 -74156351 + AluJb SINE Alu 65 286 -26 356 285 44 0 chr5 128929928 128930086 -74155446 + MER103 DNA DNA 2 166 0 183 394 32 59 chr5 128930518 128930739 -74154793 + L2 LINE L2 2573 2787 -527 241 286 39 26 chr5 128931435 128931512 -74154020 + L2 LINE L2 3186 3263 -9 466 261 5 92 chr5 128931691 128931875 -74153657 - MIR SINE MIR -45 217 50 437 171 0 13 chr5 128935594 128935670 -74149862 - Tigger5 DNA MER2_type 0 2323 2249 * 1134 208 20 0 chr5 128935668 128935870 -74149662 - Tigger5 DNA MER2_type -2085 238 33 2257 229 34 2 chr5 128935994 128936440 -74149092 + L1M2 LINE L1 2 461 -6388 * 5789 167 20 14 chr5 128936437 128938094 -74147438 + L1MA4A LINE L1 4623 6287 -16 1121 178 5 5 chr5 128938094 128938296 -74147236 + Tigger5 DNA MER2_type 2122 2323 0 3378 245 60 15 chr5 128938296 128939489 -74146043 - L1M4 LINE L1 -876 5270 4025 2186 239 96 17 chr5 128939595 128940543 -74144989 - L1M4 LINE L1 -1099 5047 4025 406 263 201 34 chr5 128941131 128941310 -74144222 - MIR SINE MIR 0 262 54 2603 128 19 12 chr5 128941428 128941851 -74143681 - MSTA LTR MaLR -2 426 1 999 191 0 0 chr5 128942378 128942551 -74142981 - MER2 DNA MER2_type -172 173 1 5439 168 32 32 chr5 128942637 128943702 -74141830 - L1MA9 LINE L1 0 6312 5249 2252 118 35 0 chr5 128943702 128944050 -74141482 - MER46B DNA MER2_type 0 236 2 5439 168 32 32 chr5 128944050 128944452 -74141080 - L1MA9 LINE L1 -1063 5249 4848 4139 176 45 15 chr5 128944612 128945224 -74140308 - L1PB4 LINE L1 -2 6856 6264 236 91 23 0 chr5 128945224 128945268 -74140264 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 2248 82 4 0 chr5 128945269 128945550 -74139982 - AluSg SINE Alu -26 284 3 4139 176 45 15 chr5 128945550 128946502 -74139030 - L1PB4 LINE L1 -593 6265 5235 * 26453 102 62 70 chr5 128946497 128948440 -74137092 - L1PA7 LINE L1 -2 6152 4195 2458 78 0 0 chr5 128948440 128948746 -74136786 - AluY SINE Alu -5 306 1 26453 102 62 70 chr5 128948746 128953004 -74132528 - L1PA7 LINE L1 -1959 4195 12 8609 224 38 36 chr5 128953012 128953154 -74132378 - L1PB4 LINE L1 -1597 5251 5111 1997 118 3 38 chr5 128953154 128953467 -74132065 + AluSx SINE Alu 1 302 -10 8609 224 38 36 chr5 128953467 128954447 -74131085 - L1PB4 LINE L1 -1737 5111 4134 2594 138 41 5 chr5 128954447 128954860 -74130672 - MSTA LTR MaLR 0 428 1 8609 224 38 36 chr5 128954860 128956249 -74129283 - L1PB4 LINE L1 -2714 4134 2748 1938 115 17 14 chr5 128956249 128956537 -74128995 - AluSc SINE Alu -12 297 9 8609 224 38 36 chr5 128956537 128958459 -74127073 - L1PB4 LINE L1 -4100 2748 892 4409 275 85 51 chr5 128958654 128960989 -74124543 - L1M2 LINE L1 -4353 2496 83 22 35 0 0 chr5 128961342 128961371 -74124161 + AT_rich Low_complexity Low_complexity 1 29 0 1274 14 0 0 chr5 128962240 128962382 -74123150 - AluYb8 SINE Alu -4 314 173 1466 222 115 15 chr5 128962382 128962842 -74122690 - L1ME2 LINE L1 -35 6129 5624 320 303 83 76 chr5 128962839 128962992 -74122540 - L1ME LINE L1 -5779 291 134 * 2117 123 0 13 chr5 128962992 128963301 -74122231 - AluSx SINE Alu -7 305 1 320 303 83 76 chr5 128963301 128963424 -74122108 - L1ME LINE L1 -5936 134 13 272 337 59 30 chr5 128963436 128963605 -74121927 + L2 LINE L2 2688 2861 -453 686 313 103 18 chr5 128963635 128963974 -74121558 + L2 LINE L2 2946 3313 0 1589 176 0 55 chr5 128965145 128965452 -74120080 - AluJo SINE Alu -19 293 4 23 33 0 0 chr5 128965461 128965491 -74120041 + AT_rich Low_complexity Low_complexity 1 30 0 357 234 60 109 chr5 128965511 128965574 -74119958 - L1ME1 LINE L1 -43 6123 6058 3015 124 11 6 chr5 128965574 128966043 -74119489 + L1PB2 LINE L1 5678 6148 -3 357 234 60 109 chr5 128966043 128966163 -74119369 - L1ME1 LINE L1 -108 6058 5949 388 180 4 53 chr5 128966263 128966377 -74119155 - L1ME1 LINE L1 -396 5770 5674 284 94 19 0 chr5 128966381 128966434 -74119098 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 10623 55 16 1 chr5 128966443 128968614 -74116918 - L1PA6 LINE L1 0 6154 3960 18788 75 12 2 chr5 128968690 128971268 -74114264 - L1PA6 LINE L1 -2166 3980 1377 9758 114 0 2 chr5 128971268 128973396 -74112136 + L1PA5 LINE L1 4031 6146 -8 339 235 176 0 chr5 128973447 128973549 -74111983 - MER112 DNA MER1_type -140 120 1 1156 260 46 5 chr5 128974217 128974590 -74110942 - L1MC4 LINE L1 -455 7587 7200 394 243 0 18 chr5 128974603 128974715 -74110817 - L1MC4 LINE L1 -10 8029 7883 273 170 0 19 chr5 128974723 128974776 -74110756 + MIR SINE MIR 125 176 -86 229 152 22 56 chr5 128974799 128974977 -74110555 + (TA)n Simple_repeat Simple_repeat 1 172 0 238 226 0 24 chr5 128974978 128975062 -74110470 + (TATAA)n Simple_repeat Simple_repeat 3 84 0 240 142 23 62 chr5 128975068 128975244 -74110288 + (TA)n Simple_repeat Simple_repeat 2 170 0 514 295 55 20 chr5 128975514 128975714 -74109818 - L2 LINE L2 -4 3309 3103 402 193 46 73 chr5 128976473 128976582 -74108950 - MIR SINE MIR -71 191 86 366 80 0 0 chr5 128976726 128976776 -74108756 + (TATG)n Simple_repeat Simple_repeat 4 53 0 197 256 0 0 chr5 128977422 128977465 -74108067 - L2 LINE L2 -666 2648 2606 296 264 47 66 chr5 128977628 128977734 -74107798 - MIR SINE MIR -85 177 74 33 73 0 0 chr5 128979052 128979120 -74106412 + AT_rich Low_complexity Low_complexity 1 68 0 2343 61 7 3 chr5 128979969 128980265 -74105267 - AluY SINE Alu -14 297 1 1985 120 46 12 chr5 128980867 128981193 -74104339 + MER44D DNA MER2_type 3 609 0 731 263 42 5 chr5 128981196 128981386 -74104146 + MIR SINE MIR 64 260 -2 496 343 19 24 chr5 128984221 128984428 -74101104 - MIR SINE MIR -52 210 5 4533 168 36 73 chr5 128985110 128987265 -74098267 - L1MA9 LINE L1 -36 6276 4195 269 223 63 144 chr5 128987504 128987823 -74097709 - L1ME4a LINE L1 -222 5899 5607 22 0 0 0 chr5 128988239 128988261 -74097271 + AT_rich Low_complexity Low_complexity 1 22 0 202 324 0 27 chr5 128989115 128989189 -74096343 - L2 LINE L2 -4 3309 3238 300 277 136 34 chr5 128989356 128989533 -74095999 - L2 LINE L2 -944 2370 2176 574 275 54 6 chr5 128989704 128989871 -74095661 - MIR SINE MIR -76 186 12 191 188 0 0 chr5 128989886 128989918 -74095614 - L2 LINE L2 -1391 1923 1892 1402 307 126 33 chr5 128989930 128990897 -74094635 - L2 LINE L2 -1298 2016 960 2143 115 15 59 chr5 128990949 128991341 -74094191 + THE1C LTR MaLR 1 375 0 21630 33 3 0 chr5 128991808 128994788 -74090744 - L1P1 LINE L1 -432 5723 2736 275 264 11 11 chr5 128996046 128996133 -74089399 - MIR SINE MIR -1 261 175 276 289 24 24 chr5 128998339 128998422 -74087110 + MIR SINE MIR 66 148 -60 313 313 46 8 chr5 128998579 128998710 -74086822 + MIR SINE MIR 87 222 -40 26 0 0 0 chr5 128999501 128999527 -74086005 + AT_rich Low_complexity Low_complexity 1 26 0 1290 259 150 19 chr5 128999552 129000024 -74085508 - MLT1H LTR MaLR -3 546 13 682 222 33 11 chr5 129000044 129000271 -74085261 - L1ME4a LINE L1 -593 5577 5346 350 139 47 0 chr5 129000528 129000614 -74084918 + CT-rich Low_complexity Low_complexity 2 91 0 576 244 8 8 chr5 129000622 129000753 -74084779 - FRAM SINE Alu -44 132 2 854 313 73 9 chr5 129001167 129001566 -74083966 + L2 LINE L2 2632 3057 -256 21 0 0 0 chr5 129002397 129002418 -74083114 + AT_rich Low_complexity Low_complexity 1 21 0 414 314 51 0 chr5 129003323 129003479 -74082053 + MIR SINE MIR 88 251 -11 2288 153 68 19 chr5 129003540 129003965 -74081567 - Tigger2 DNA MER2_type 0 2718 2273 248 196 0 54 chr5 129003955 129004011 -74081521 - Tigger2 DNA MER2_type -2649 69 17 * 828 120 0 0 chr5 129005420 129005537 -74079995 + AluSq/x SINE Alu 1 117 -196 549 249 18 24 chr5 129005654 129005819 -74079713 - MLT1A2 LTR MaLR -207 167 4 191 250 0 42 chr5 129006182 129006230 -74079302 - MIR SINE MIR -131 77 32 29325 108 16 16 chr5 129006395 129011888 -74073644 + L1PA7 LINE L1 663 6148 -6 238 25 25 25 chr5 129013717 129013757 -74071775 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1382 290 103 19 chr5 129013800 129014604 -74070928 - L2 LINE L2 0 3313 2432 462 297 91 5 chr5 129014939 129015158 -74070374 + L2 LINE L2 2986 3223 -90 3772 147 24 9 chr5 129015275 129015942 -74069590 + L1MB3 LINE L1 5500 6176 -7 1409 178 27 17 chr5 129016080 129016373 -74069159 - AluSx SINE Alu -16 296 1 26 0 0 0 chr5 129016651 129016677 -74068855 + AT_rich Low_complexity Low_complexity 1 26 0 441 229 78 61 chr5 129016727 129016958 -74068574 - LTR41 LTR ERVL -8 765 531 290 321 138 25 chr5 129017313 129017509 -74068023 + L2 LINE L2 2555 2772 -542 211 256 0 0 chr5 129017852 129017895 -74067637 + L2 LINE L2 3271 3313 0 239 222 22 0 chr5 129018226 129018271 -74067261 - L2 LINE L2 -18 3295 3250 23 0 0 0 chr5 129018487 129018510 -74067022 + AT_rich Low_complexity Low_complexity 1 23 0 198 282 37 112 chr5 129019042 129019230 -74066302 - L2 LINE L2 -26 3287 3114 393 327 42 54 chr5 129019233 129019401 -74066131 - MIR3 SINE MIR -28 180 15 507 154 143 0 chr5 129070242 129070333 -74015199 - U6 snRNA snRNA 0 107 4 1569 179 26 13 chr5 129070344 129070717 -74014815 - AluJb SINE Alu 0 377 1 180 293 35 0 chr5 129070811 129070869 -74014663 - MIR SINE MIR 0 262 203 305 182 36 0 chr5 129071067 129071122 -74014410 - FLAM_A SINE Alu -47 86 30 358 307 35 35 chr5 129071763 129071877 -74013655 + MLT1K LTR MaLR 111 224 -364 261 196 0 0 chr5 129071893 129071939 -74013593 - MLT1L LTR MaLR -233 382 337 343 193 36 12 chr5 129072301 129072384 -74013148 + MLT1K LTR MaLR 494 578 -10 21 0 0 0 chr5 129072740 129072761 -74012771 + AT_rich Low_complexity Low_complexity 1 21 0 10598 165 115 14 chr5 129072903 129075944 -74009588 + L1PBa LINE L1 346 3693 -3169 320 115 98 0 chr5 129079523 129079584 -74005948 - LTR54 LTR ERV1 -48 462 396 2241 214 93 34 chr5 129079851 129080621 -74004911 - L1ME2 LINE L1 -11 6153 5338 401 98 0 0 chr5 129082856 129082907 -74002625 + MSTA-int LTR MaLR 868 918 -662 294 118 0 212 chr5 129082914 129082999 -74002533 + MSTA-int LTR MaLR 714 780 -871 * 4453 127 6 12 chr5 129082994 129083655 -74001877 + MSTA-int LTR MaLR 923 1579 -1 1150 132 162 17 chr5 129083656 129083891 -74001641 + MSTA LTR MaLR 1 269 -159 4784 189 16 12 chr5 129083891 129084749 -74000783 + MSTA-int LTR MaLR 790 1651 0 2409 182 44 0 chr5 129084751 129085158 -74000374 + MSTA LTR MaLR 3 427 -1 347 102 0 0 chr5 129085190 129085239 -74000293 - MADE1 DNA Mariner -30 50 2 323 361 73 10 chr5 129085415 129085620 -73999912 + MIR SINE MIR 44 261 -1 846 146 65 5 chr5 129085776 129085961 -73999571 + L1MA3 LINE L1 5998 6193 -112 1628 128 28 7 chr5 129085783 129086073 -73999459 + L1MA3 LINE L1 6010 6305 0 21 57 0 0 chr5 129086098 129086133 -73999399 + AT_rich Low_complexity Low_complexity 1 35 0 547 308 97 28 chr5 129086154 129086443 -73999089 - MLT1I LTR MaLR -28 381 73 608 198 85 55 chr5 129087107 129087269 -73998263 + MLT1B LTR MaLR 1 146 -228 740 145 8 8 chr5 129087269 129087386 -73998146 + FLAM_C SINE Alu 1 117 -16 608 198 85 55 chr5 129087386 129087430 -73998102 + MLT1B LTR MaLR 146 187 -187 462 311 82 5 chr5 129087531 129087727 -73997805 - L2 LINE L2 -1061 2253 2043 709 194 0 87 chr5 129088064 129088260 -73997272 + MLT1A2 LTR MaLR 1 179 -195 1115 282 124 22 chr5 129088273 129088731 -73996801 - MLT1D LTR MaLR 0 505 1 24 32 0 0 chr5 129091542 129091573 -73993959 + AT_rich Low_complexity Low_complexity 1 31 0 2055 153 8 33 chr5 129091589 129091987 -73993545 - MLT1B LTR MaLR -2 388 1 391 271 90 15 chr5 129091988 129092121 -73993411 + L2 LINE L2 3171 3313 0 1626 196 11 3 chr5 129092954 129093240 -73992292 + AluJo SINE Alu 1 288 -24 2261 90 0 10 chr5 129093510 129093809 -73991723 + AluSq SINE Alu 13 308 -5 279 307 13 0 chr5 129093814 129093889 -73991643 + L2 LINE L2 3189 3264 -8 1168 263 84 68 chr5 129095099 129095653 -73989879 + MLT1F1 LTR MaLR 1 564 -3 264 239 0 14 chr5 129095655 129095726 -73989806 + LTR67 LTR ERVL 474 543 -14 216 194 139 56 chr5 129095973 129096045 -73989487 + L3 LINE CR1 373 450 -1127 1157 155 17 9 chr5 129097148 129097380 -73988152 + L1MA8 LINE L1 5993 6226 -65 711 284 105 28 chr5 129097581 129097866 -73987666 + ERVL LTR ERVL 2291 2597 -3167 681 317 163 12 chr5 129098036 129098580 -73986952 - L2 LINE L2 0 3313 2690 630 267 86 1 chr5 129100215 129100539 -73984993 - L1MCa LINE L1 -4296 2131 1422 315 281 55 0 chr5 129101519 129101647 -73983885 - L1MEc LINE L1 -4856 1540 1406 251 337 66 33 chr5 129101754 129101935 -73983597 + HAL1b LINE L1 406 592 -756 536 335 5 11 chr5 129104276 129104461 -73981071 - MIR3 SINE MIR -5 203 20 2049 216 87 41 chr5 129105051 129105575 -73979957 + MER45B DNA AcHobo 1 549 -491 1959 105 80 43 chr5 129105575 129105926 -73979606 - THE1B LTR MaLR 0 364 1 2168 155 53 5 chr5 129105927 129106341 -73979191 + MER45B DNA AcHobo 550 983 -57 605 354 78 16 chr5 129106685 129107055 -73978477 - L2 LINE L2 0 3313 2921 1058 244 82 53 chr5 129107064 129107468 -73978064 + MLT1C LTR MaLR 1 421 -46 1368 180 32 122 chr5 129107468 129107869 -73977663 + MLT1A1 LTR MaLR 1 365 0 1058 244 82 53 chr5 129107869 129107918 -73977614 + MLT1C LTR MaLR 421 467 0 554 329 115 53 chr5 129107918 129108516 -73977016 - L2 LINE L2 -398 2916 2282 2153 152 18 28 chr5 129111379 129111773 -73973759 - MLT1B LTR MaLR 0 390 1 351 303 85 38 chr5 129111798 129112009 -73973523 - L2 LINE L2 -18 3295 3075 308 361 118 14 chr5 129112091 129112371 -73973161 - L2 LINE L2 -400 2914 2606 412 289 77 26 chr5 129113226 129113382 -73972150 - MIR3 SINE MIR -30 178 15 325 174 20 60 chr5 129114805 129114954 -73970578 + (TA)n Simple_repeat Simple_repeat 2 144 0 270 257 0 0 chr5 129115085 129115155 -73970377 + (TA)n Simple_repeat Simple_repeat 1 70 0 1206 165 5 5 chr5 129115395 129115607 -73969925 + L1MA7 LINE L1 5856 6067 -224 691 147 80 20 chr5 129115608 129115758 -73969774 + L1MA7 LINE L1 6127 6285 -6 225 403 22 17 chr5 129115825 129116006 -73969526 + L2 LINE L2 870 1051 -2263 308 292 36 36 chr5 129116840 129116977 -73968555 - HAL1 LINE L1 -600 1907 1771 658 253 11 0 chr5 129116998 129117184 -73968348 - HAL1 LINE L1 -810 1697 1510 40 79 0 0 chr5 129117223 129117312 -73968220 + AT_rich Low_complexity Low_complexity 1 89 0 815 254 69 41 chr5 129117312 129118138 -73967394 - HAL1 LINE L1 -1050 1457 557 1713 153 28 22 chr5 129118261 129118581 -73966951 - L1MC1 LINE L1 -8 6325 6004 1352 165 8 4 chr5 129118832 129119087 -73966445 - L1MA5 LINE L1 -58 6242 5987 * 3164 103 38 10 chr5 129119085 129119588 -73965944 + L1MA5 LINE L1 5433 5949 -351 284 346 144 24 chr5 129119594 129119935 -73965597 + L2 LINE L2 1875 2256 -1058 1257 235 35 61 chr5 129119935 129120330 -73965202 + MLT1B LTR MaLR 1 385 -5 1364 86 109 5 chr5 129120442 129120663 -73964869 - L1PA11 LINE L1 0 6174 5931 542 121 0 0 chr5 129120665 129120748 -73964784 + L1PA11 LINE L1 5867 5949 -219 474 349 53 19 chr5 129120789 129121107 -73964425 + L2 LINE L2 2377 2705 -609 1905 144 18 0 chr5 129121116 129121420 -73964112 + AluJb SINE Alu 1 309 0 1287 161 0 69 chr5 129123209 129123431 -73962101 - AluSx SINE Alu -70 242 39 2222 103 0 0 chr5 129123431 129123721 -73961811 + AluSx SINE Alu 5 294 -18 1287 161 0 69 chr5 129123721 129123758 -73961774 - AluSx SINE Alu -273 39 1 190 98 73 0 chr5 129123801 129123842 -73961690 + GA-rich Low_complexity Low_complexity 2 45 0 212 250 0 45 chr5 129124768 129124856 -73960676 + CT-rich Low_complexity Low_complexity 1 84 0 316 258 62 39 chr5 129125202 129125330 -73960202 + L2 LINE L2 3182 3312 -1 919 257 18 37 chr5 129125407 129125679 -73959853 + MLT2B1 LTR ERVL 198 464 -56 253 137 78 0 chr5 129125739 129125790 -73959742 + MLT2B1 LTR ERVL 461 515 0 259 314 23 0 chr5 129126223 129126309 -73959223 + L2 LINE L2 3185 3272 0 2050 147 10 70 chr5 129127607 129128022 -73957510 + MLT1B LTR MaLR 1 390 0 1483 186 49 16 chr5 129128182 129128489 -73957043 + MLT1C LTR MaLR 3 319 -148 719 174 6 93 chr5 129128589 129128750 -73956782 + MLT1C LTR MaLR 320 466 -1 23 0 0 0 chr5 129129129 129129152 -73956380 + AT_rich Low_complexity Low_complexity 1 23 0 2298 108 0 0 chr5 129129257 129129564 -73955968 - AluSq SINE Alu -6 307 1 790 250 145 4 chr5 129129894 129130142 -73955390 - LTR40b LTR ERVL -2 460 178 209 83 28 0 chr5 129130590 129130626 -73954906 + (TA)n Simple_repeat Simple_repeat 2 38 0 198 103 0 0 chr5 129130757 129130786 -73954746 + (TTCCC)n Simple_repeat Simple_repeat 1 29 0 232 204 19 0 chr5 129130792 129130846 -73954686 + T-rich Low_complexity Low_complexity 5 59 0 768 83 58 8 chr5 129130864 129130985 -73954547 + L1PB1 LINE L1 6022 6148 -3 789 221 136 0 chr5 129131257 129131470 -73954062 - LTR40a LTR ERVL -275 244 3 2102 131 3 0 chr5 129131898 129132196 -73953336 - AluSg SINE Alu -11 299 1 29 60 0 0 chr5 129133973 129134023 -73951509 + AT_rich Low_complexity Low_complexity 1 50 0 481 283 26 7 chr5 129134384 129134536 -73950996 + MIR SINE MIR 30 184 -78 1693 246 3 6 chr5 129134680 129135046 -73950486 + MLT1A1 LTR MaLR 1 365 0 2543 186 96 16 chr5 129135046 129135692 -73949840 + MLT1A1-int LTR MaLR 1 770 -965 2081 203 19 129 chr5 129135691 129136394 -73949138 + MLT1A1-int LTR MaLR 1083 1707 -28 * 2011 170 27 16 chr5 129136563 129136939 -73948593 - L1PB4 LINE L1 0 6156 5777 188 101 50 59 chr5 129136945 129137064 -73948468 + (TA)n Simple_repeat Simple_repeat 1 118 0 237 178 33 44 chr5 129137079 129137169 -73948363 + (TA)n Simple_repeat Simple_repeat 1 89 0 437 184 13 4 chr5 129137184 129137284 -73948248 - L1P4 LINE L1 -354 5814 5711 7158 200 13 19 chr5 129137384 129138724 -73946808 - L1P4 LINE L1 -723 5433 4105 2335 109 0 0 chr5 129138724 129139027 -73946505 + AluSq SINE Alu 1 303 -10 7158 200 13 19 chr5 129139027 129139343 -73946189 - L1P4 LINE L1 -2051 4105 3789 1959 159 133 18 chr5 129139343 129139727 -73945805 + MSTA LTR MaLR 1 428 0 7907 141 31 39 chr5 129139729 129141081 -73944451 + MSTA-int LTR MaLR 3 1343 -237 981 198 111 35 chr5 129141181 129141459 -73944073 + MSTA LTR MaLR 44 318 -57 7402 228 30 10 chr5 129141469 129142075 -73943457 - L1 LINE L1 -3048 3800 3208 369 0 0 0 chr5 129142075 129142116 -73943416 + (TG)n Simple_repeat Simple_repeat 1 41 0 7402 228 30 10 chr5 129142116 129144194 -73941338 - L1 LINE L1 -3640 3208 1060 2075 137 144 21 chr5 129144947 129145328 -73940204 - MSTA LTR MaLR 0 428 1 1229 303 75 10 chr5 129145538 129145951 -73939581 - L1 LINE L1 -6399 450 11 23 54 0 0 chr5 129146449 129146486 -73939046 + AT_rich Low_complexity Low_complexity 1 37 0 269 295 82 41 chr5 129146809 129146931 -73938601 + HAL1 LINE L1 4 130 -2377 397 319 54 28 chr5 129147543 129147900 -73937632 + HAL1 LINE L1 841 1263 -1244 14216 192 48 19 chr5 129147932 129152022 -73933510 + L1MA2 LINE L1 17 3990 -3733 2105 150 0 0 chr5 129152022 129152328 -73933204 + AluSx SINE Alu 3 308 -4 14216 192 48 19 chr5 129152328 129153146 -73932386 + L1MA2 LINE L1 3990 4783 -2940 5722 158 38 29 chr5 129153146 129154208 -73931324 + MER11C LTR ERVK 1 1071 0 14216 192 48 19 chr5 129154208 129156525 -73929007 + L1MA2 LINE L1 4783 7723 0 34 24 0 0 chr5 129156526 129156567 -73928965 + AT_rich Low_complexity Low_complexity 1 41 0 472 313 104 14 chr5 129156602 129157034 -73928498 + HAL1 LINE L1 1340 1810 -697 22 0 0 0 chr5 129157217 129157239 -73928293 + AT_rich Low_complexity Low_complexity 1 22 0 275 294 131 35 chr5 129157533 129157846 -73927686 + HAL1 LINE L1 2165 2507 0 2343 174 59 32 chr5 129157907 129158430 -73927102 - MER61A-int LTR ERV1 -4679 538 2 1060 125 85 25 chr5 129158431 129158631 -73926901 - MER61A LTR ERV1 0 343 132 2250 138 67 23 chr5 129164081 129164517 -73921015 + MLT1C LTR MaLR 8 462 -5 253 173 19 19 chr5 129164548 129164600 -73920932 + L2 LINE L2 3195 3246 -67 234 0 0 0 chr5 129167192 129167218 -73918314 + (A)n Simple_repeat Simple_repeat 1 26 0 578 270 145 0 chr5 129169311 129169470 -73916062 + MER5A DNA MER1_type 8 189 0 263 325 107 6 chr5 129169846 129170015 -73915517 + MIR SINE MIR 47 232 -30 207 162 0 0 chr5 129170662 129170699 -73914833 + A-rich Low_complexity Low_complexity 1 37 0 2332 86 7 0 chr5 129171148 129171449 -73914083 + AluSx SINE Alu 1 303 -9 33 0 0 0 chr5 129171449 129171482 -73914050 + AT_rich Low_complexity Low_complexity 1 33 0 629 295 92 10 chr5 129175853 129176060 -73909472 + MIR SINE MIR 2 225 -37 2111 111 0 20 chr5 129176317 129176614 -73908918 + AluSq SINE Alu 1 291 -22 202 331 114 33 chr5 129176756 129176940 -73908592 - MIR3 SINE MIR -7 201 3 1981 136 3 7 chr5 129177201 129177496 -73908036 + AluSq SINE Alu 1 294 -19 6575 208 25 8 chr5 129179069 129180581 -73904951 + L1 LINE L1 3067 4603 -1543 1930 91 8 14 chr5 129180548 129181035 -73904497 + L1PB1 LINE L1 5284 6133 -18 * 1930 137 3 0 chr5 129181035 129181316 -73904216 + L1PB1 LINE L1 5858 6143 -8 1930 91 8 14 chr5 129181316 129181327 -73904205 + L1PB1 LINE L1 6133 6143 -8 23 54 0 0 chr5 129181445 129181482 -73904050 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 129181891 129181918 -73903614 + AT_rich Low_complexity Low_complexity 1 27 0 201 226 19 38 chr5 129181979 129182032 -73903500 - L3 LINE CR1 -2 1575 1524 1637 156 28 28 chr5 129182211 129182500 -73903032 - AluJb SINE Alu -23 289 1 194 349 81 0 chr5 129182649 129182735 -73902797 - MIR SINE MIR -86 122 30 1645 192 30 7 chr5 129183179 129183481 -73902051 - L1MC1 LINE L1 -6 6607 6299 4094 165 21 9 chr5 129183489 129184349 -73901183 - L1MC1 LINE L1 -385 6228 5366 6984 151 118 51 chr5 129184376 129184596 -73900936 - L1MC1 LINE L1 -4462 1964 1760 605 178 129 0 chr5 129184596 129184697 -73900835 - FLAM_A SINE Alu -19 114 1 6984 151 118 51 chr5 129184697 129184797 -73900735 - L1MC1 LINE L1 -4666 1760 1668 1845 100 29 18 chr5 129184797 129185076 -73900456 - L1MA2 LINE L1 0 6304 6023 6984 151 118 51 chr5 129185076 129185422 -73900110 - L1MC1 LINE L1 -4758 1668 1347 216 0 0 0 chr5 129185422 129185446 -73900086 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6984 151 118 51 chr5 129185446 129186517 -73899015 - L1MC1 LINE L1 -5079 1347 20 268 333 0 0 chr5 129186616 129186688 -73898844 - MIR SINE MIR -105 103 32 7870 24 2 0 chr5 129186709 129187979 -73897553 - L1PA3 LINE L1 0 6155 4884 * 9265 39 1 0 chr5 129187977 129189124 -73896408 + L1P LINE L1 1402 2549 -3597 24 0 0 0 chr5 129189967 129189991 -73895541 + AT_rich Low_complexity Low_complexity 1 24 0 198 258 0 0 chr5 129190344 129190406 -73895126 + (TA)n Simple_repeat Simple_repeat 2 63 0 275 282 0 0 chr5 129190417 129190488 -73895044 + (TATG)n Simple_repeat Simple_repeat 4 74 0 21 0 0 0 chr5 129190522 129190543 -73894989 + AT_rich Low_complexity Low_complexity 1 21 0 2298 112 0 3 chr5 129191191 129191503 -73894029 + AluSq SINE Alu 1 311 -2 1927 142 17 0 chr5 129192352 129192640 -73892892 - AluSg SINE Alu -17 293 1 221 328 103 0 chr5 129192691 129192800 -73892732 - L2 LINE L2 0 3313 3193 313 338 109 40 chr5 129192800 129193001 -73892531 + MIR SINE MIR 3 217 -45 1508 220 39 39 chr5 129194703 129195085 -73890447 - MSTD LTR MaLR -14 382 1 246 105 0 0 chr5 129195127 129195165 -73890367 + (TA)n Simple_repeat Simple_repeat 1 38 0 435 295 18 0 chr5 129195449 129195561 -73889971 + L2 LINE L2 2482 2595 -719 272 131 33 0 chr5 129195965 129196015 -73889517 + (TATATG)n Simple_repeat Simple_repeat 2 56 -8 1741 156 0 99 chr5 129196015 129196400 -73889132 - MER7A DNA MER2_type 0 346 2 272 131 33 0 chr5 129196400 129196410 -73889122 + (TATATG)n Simple_repeat Simple_repeat 56 64 0 209 195 0 0 chr5 129196580 129196621 -73888911 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 295 102 8 chr5 129196696 129196873 -73888659 + MIR SINE MIR 1 232 -30 513 0 0 0 chr5 129197317 129197374 -73888158 + (TG)n Simple_repeat Simple_repeat 2 58 0 268 256 209 16 chr5 129199296 129199425 -73886107 - MIR SINE MIR -3 259 106 25 31 0 0 chr5 129199958 129199990 -73885542 + AT_rich Low_complexity Low_complexity 1 32 0 25 65 0 0 chr5 129200246 129200292 -73885240 + AT_rich Low_complexity Low_complexity 1 46 0 1793 110 0 4 chr5 129200293 129200548 -73884984 + AluSc SINE Alu 35 288 -21 356 71 18 0 chr5 129200548 129200604 -73884928 + (TA)n Simple_repeat Simple_repeat 1 57 0 21 0 0 0 chr5 129201031 129201052 -73884480 + AT_rich Low_complexity Low_complexity 1 21 0 2182 93 0 13 chr5 129201371 129201682 -73883850 - AluSc SINE Alu -2 307 1 315 246 53 9 chr5 129201931 129202045 -73883487 - L1ME4a LINE L1 -4 6117 5999 1393 153 70 95 chr5 129203725 129204125 -73881407 + MLT1B LTR MaLR 1 390 0 909 232 150 18 chr5 129204256 129204597 -73880935 + MLT1D LTR MaLR 120 505 0 303 254 175 44 chr5 129204597 129204849 -73880683 - L1M4 LINE L1 -2202 3944 3660 3040 124 53 90 chr5 129205683 129206303 -73879229 + LTR26 LTR ERV1 1 597 -6 222 209 0 0 chr5 129206720 129206763 -73878769 + (TAGG)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr5 129207147 129207171 -73878361 + AT_rich Low_complexity Low_complexity 1 24 0 2076 128 3 3 chr5 129207531 129207836 -73877696 - AluSg SINE Alu -5 305 1 271 279 0 15 chr5 129208251 129208319 -73877213 - L2 LINE L2 -5 3308 3242 21 0 0 0 chr5 129208787 129208808 -73876724 + AT_rich Low_complexity Low_complexity 1 21 0 298 257 86 64 chr5 129209098 129209196 -73876336 + L2 LINE L2 3171 3274 -39 2150 183 34 7 chr5 129209196 129209611 -73875921 - MSTB LTR MaLR 0 426 1 298 257 86 64 chr5 129209611 129209652 -73875880 + L2 LINE L2 3274 3313 0 770 295 63 66 chr5 129209891 129210572 -73874960 - L1ME LINE L1 -5118 952 274 314 343 83 50 chr5 129210680 129211076 -73874456 - L1ME LINE L1 -5610 460 52 24 53 0 0 chr5 129213183 129213221 -73872311 + AT_rich Low_complexity Low_complexity 1 38 0 23 68 0 0 chr5 129213952 129213996 -73871536 + AT_rich Low_complexity Low_complexity 1 44 0 483 227 92 43 chr5 129216168 129216375 -73869157 + L1ME3A LINE L1 5896 6112 -58 1531 101 0 10 chr5 129217351 129217558 -73867974 + AluSg/x SINE Alu 84 288 -24 498 229 296 0 chr5 129217634 129217813 -73867719 - MIR SINE MIR -15 247 16 1257 262 110 24 chr5 129217884 129217957 -73867575 - L2 LINE L2 0 3313 3248 1793 147 30 27 chr5 129217957 129218291 -73867241 + MER44D DNA MER2_type 2 606 -3 1257 262 110 24 chr5 129218291 129218753 -73866779 - L2 LINE L2 -65 3248 2726 1160 314 56 24 chr5 129220205 129220798 -73864734 - HAL1 LINE L1 -630 1877 1266 2572 138 145 22 chr5 129220982 129221071 -73864461 + L1MC1 LINE L1 5731 5808 -525 2157 128 0 0 chr5 129221071 129221377 -73864155 + AluSq SINE Alu 1 306 -7 2572 138 145 22 chr5 129221377 129221824 -73863708 + L1MC1 LINE L1 5808 6333 0 788 244 82 49 chr5 129221825 129222181 -73863351 - L2 LINE L2 -197 3116 2751 664 206 8 8 chr5 129222378 129222504 -73863028 + FLAM_A SINE Alu 1 126 -7 280 287 35 9 chr5 129225083 129225198 -73860334 + GA-rich Low_complexity Low_complexity 3 120 0 265 322 130 0 chr5 129225840 129225955 -73859577 - MIR3 SINE MIR -46 162 33 2265 63 0 17 chr5 129226433 129226766 -73858766 - AluY SINE Alu 0 328 1 219 265 0 81 chr5 129227146 129227231 -73858301 + MIR SINE MIR 34 108 -100 * 408 326 67 38 chr5 129227229 129227468 -73858064 - MIR SINE MIR -5 257 12 213 108 0 0 chr5 129229496 129229533 -73855999 + (A)n Simple_repeat Simple_repeat 1 37 0 12327 178 32 12 chr5 129229543 129232822 -73852710 + L1PA13 LINE L1 2851 6157 -6 306 0 0 0 chr5 129236119 129236153 -73849379 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 21741 27 0 0 chr5 129236153 129240386 -73845146 - L1PA3 LINE L1 -13 6858 2562 3183 140 131 3 chr5 129241425 129241998 -73843534 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 984 176 0 0 chr5 129241995 129242154 -73843378 - Tigger4(Zombi) DNA MER2_type -2571 160 2 * 23 86 0 0 chr5 129243179 129243237 -73842295 + AT_rich Low_complexity Low_complexity 1 58 0 262 271 107 89 chr5 129243372 129243910 -73841622 - L1PA3 LINE L1 -856 2367 1809 1489 139 18 0 chr5 129243910 129244133 -73841399 - AluSg/x SINE Alu -8 302 76 262 271 107 89 chr5 129244133 129244399 -73841133 - L1PA3 LINE L1 -1414 1809 1549 801 245 51 31 chr5 129246752 129247009 -73838523 - MIR SINE MIR 0 262 1 5588 60 17 17 chr5 129248072 129248838 -73836694 + MER4E LTR ERV1 1 766 0 206 303 0 30 chr5 129250428 129250494 -73835038 - L2 LINE L2 -4 3268 3205 620 292 28 0 chr5 129250540 129250718 -73834814 - MIR SINE MIR -77 185 3 269 291 89 65 chr5 129250725 129251017 -73834515 - L2 LINE L2 -86 3227 2929 22 35 0 0 chr5 129251112 129251141 -73834391 + AT_rich Low_complexity Low_complexity 1 29 0 13648 46 5 1 chr5 129251494 129253948 -73831584 + L1PA5 LINE L1 3690 6146 -8 22 56 0 0 chr5 129254417 129254453 -73831079 + AT_rich Low_complexity Low_complexity 1 36 0 1778 161 3 7 chr5 129255505 129255791 -73829741 + AluSx SINE Alu 4 288 -24 26 30 0 0 chr5 129255791 129255824 -73829708 + AT_rich Low_complexity Low_complexity 1 33 0 250 181 48 0 chr5 129256136 129256219 -73829313 + (TA)n Simple_repeat Simple_repeat 2 88 0 7582 127 41 10 chr5 129256875 129258137 -73827395 - HSMAR2 DNA Mariner 0 1302 2 774 242 113 5 chr5 129259143 129259329 -73826203 - MER58A DNA MER1_type -1 223 18 746 326 120 40 chr5 129259424 129260164 -73825368 + L2 LINE L2 1851 2649 -665 379 332 66 66 chr5 129260146 129260450 -73825082 + L2 LINE L2 2926 3229 -43 * 224 317 12 12 chr5 129260956 129261038 -73824494 - L2 LINE L2 -214 3058 2977 24 32 0 0 chr5 129261038 129261069 -73824463 + AT_rich Low_complexity Low_complexity 1 31 0 1871 139 59 0 chr5 129261096 129261383 -73824149 - AluSq SINE Alu -9 304 1 1530 170 22 75 chr5 129261540 129261911 -73823621 + L1MB8 LINE L1 5828 6178 0 329 245 49 29 chr5 129264927 129265029 -73820503 + MIR3 SINE MIR 99 202 -6 1073 323 102 35 chr5 129266785 129267355 -73818177 + L2 LINE L2 2166 2773 -541 1748 175 66 6 chr5 129267395 129267760 -73817772 - MLT1B LTR MaLR -3 387 1 2162 99 0 0 chr5 129268199 129268481 -73817051 - AluSx SINE Alu -17 295 14 1752 169 10 16 chr5 129268695 129269002 -73816530 + AluJo SINE Alu 1 305 -7 258 156 0 0 chr5 129269170 129269215 -73816317 + (TG)n Simple_repeat Simple_repeat 2 46 0 969 267 81 8 chr5 129269984 129270242 -73815290 - MER115 DNA AcHobo 0 693 417 6226 231 63 30 chr5 129270426 129271883 -73813649 - L1 LINE L1 -2219 4163 2755 852 234 45 0 chr5 129271883 129272084 -73813448 + MER6B DNA MER2_type 1 210 0 6226 231 63 30 chr5 129272084 129273720 -73811812 - L1 LINE L1 -3627 2755 1059 2302 107 7 0 chr5 129273720 129274029 -73811503 - AluSx SINE Alu -1 311 1 6226 231 63 30 chr5 129274029 129274293 -73811239 - L1 LINE L1 -5323 1059 805 234 229 14 29 chr5 129274426 129274496 -73811036 - L1 LINE L1 -5308 995 927 278 270 52 78 chr5 129274533 129274763 -73810769 - L1 LINE L1 -5899 414 191 395 174 23 12 chr5 129276911 129276997 -73808535 + LTR32 LTR ERVL 307 393 -78 367 282 68 55 chr5 129279384 129279895 -73805637 - L1ME4a LINE L1 -1 6120 5603 1654 184 11 11 chr5 129279941 129280224 -73805308 + AluJb SINE Alu 1 283 -29 1473 160 6 94 chr5 129280317 129280636 -73804896 + AluJo SINE Alu 5 295 -17 419 248 6 12 chr5 129280700 129280812 -73804720 - L1ME4a LINE L1 -517 5604 5498 745 316 52 58 chr5 129281007 129281469 -73804063 - L2 LINE L2 0 3272 2814 355 319 216 9 chr5 129281466 129281698 -73803834 + L2 LINE L2 2495 2774 -540 * 377 261 108 62 chr5 129281736 129281912 -73803620 + MIR SINE MIR 58 241 -21 22 0 0 0 chr5 129282098 129282120 -73803412 + AT_rich Low_complexity Low_complexity 1 22 0 334 176 176 0 chr5 129282279 129282347 -73803185 + MER58A DNA MER1_type 1 80 -27 1425 210 47 121 chr5 129282349 129282796 -73802736 + MLT1E LTR MaLR 180 593 0 737 152 87 14 chr5 129282796 129282934 -73802598 + MER58A DNA MER1_type 77 224 0 327 257 182 42 chr5 129283066 129283280 -73802252 + MLT1J2 LTR MaLR 64 307 -143 234 62 0 0 chr5 129285483 129285515 -73800017 + (CA)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr5 129286402 129286431 -73799101 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 129288083 129288110 -73797422 + (T)n Simple_repeat Simple_repeat 1 27 0 25 0 0 0 chr5 129288147 129288172 -73797360 + AT_rich Low_complexity Low_complexity 1 25 0 210 191 0 0 chr5 129288646 129288693 -73796839 + (TG)n Simple_repeat Simple_repeat 1 47 0 330 326 97 23 chr5 129289310 129289492 -73796040 - MIR SINE MIR -50 212 21 495 220 64 29 chr5 129289503 129289676 -73795856 + LTR41 LTR ERVL 1 179 -594 336 227 144 98 chr5 129290070 129290240 -73795292 + LTR41 LTR ERVL 510 717 -78 2110 131 3 0 chr5 129290240 129290530 -73795002 - AluSx SINE Alu -21 291 1 336 227 144 98 chr5 129290530 129290613 -73794919 + LTR41 LTR ERVL 717 795 0 297 359 0 10 chr5 129291083 129291186 -73794346 - MIR SINE MIR -84 124 23 306 98 82 0 chr5 129292463 129292524 -73793008 - LTR54 LTR ERV1 -49 461 396 2712 223 94 18 chr5 129292793 129293851 -73791681 - L1ME2 LINE L1 -11 6153 5003 7179 219 72 61 chr5 129293878 129294173 -73791359 - L1MB3 LINE L1 -3 6362 6072 1724 197 0 7 chr5 129294173 129294467 -73791065 - AluJb SINE Alu -20 292 1 7179 219 72 61 chr5 129294467 129296746 -73788786 - L1MB3 LINE L1 -293 6072 3819 2074 131 3 16 chr5 129296746 129297060 -73788472 - AluSx SINE Alu -2 310 1 7179 219 72 61 chr5 129297060 129297360 -73788172 - L1MB3 LINE L1 -2546 3819 3524 1683 189 0 7 chr5 129297360 129297635 -73787897 - AluJb SINE Alu -39 273 1 7179 219 72 61 chr5 129297635 129298476 -73787056 - L1MB3 LINE L1 -2841 3524 2380 324 312 91 7 chr5 129298551 129298705 -73786827 - HERVL LTR ERVL -2174 3480 3314 279 237 70 44 chr5 129299149 129299263 -73786269 - HERVL LTR ERVL -2622 3032 2916 2932 173 17 62 chr5 129299340 129299981 -73785551 - LTR9 LTR ERV1 0 612 1 928 153 76 22 chr5 129301621 129301844 -73783688 - MER96B DNA MER1_type? -3 414 180 4074 196 55 6 chr5 129301900 129302751 -73782781 - L1MB3 LINE L1 -4434 894 2 792 229 67 19 chr5 129302745 129303012 -73782520 - L1ME2 LINE L1 -1137 5009 4730 * 958 144 19 102 chr5 129303031 129303343 -73782189 + L1M1 LINE L1 2279 2500 -4065 419 262 41 41 chr5 129303353 129303525 -73782007 + ERVL LTR ERVL 3686 3857 -1907 290 272 0 49 chr5 129303785 129303866 -73781666 - L2 LINE L2 -8 3305 3229 632 289 28 55 chr5 129304396 129304759 -73780773 - L1ME LINE L1 -5711 359 7 416 285 79 54 chr5 129304765 129305081 -73780451 - L1ME LINE L1 -5185 885 562 198 292 15 0 chr5 129305874 129305939 -73779593 + L2 LINE L2 2898 2963 -309 235 317 85 0 chr5 129306132 129306214 -73779318 - L2 LINE L2 -32 3240 3152 1007 187 57 40 chr5 129307565 129307914 -73777618 - MSTD LTR MaLR -1 395 6 245 148 0 0 chr5 129308157 129308211 -73777321 + L1MEc LINE L1 956 1009 -5387 392 232 30 49 chr5 129308266 129308430 -73777102 + L1MEc LINE L1 703 863 -5744 998 142 0 0 chr5 129308469 129308610 -73776922 + AluJ SINE Alu 1 141 -171 264 255 62 14 chr5 129308647 129308792 -73776740 + L1MEc LINE L1 877 1028 -5579 26 98 0 0 chr5 129308805 129308887 -73776645 + AT_rich Low_complexity Low_complexity 1 82 0 1205 273 52 21 chr5 129308895 129309438 -73776094 + L1MEc LINE L1 1042 1608 -4999 1062 236 79 45 chr5 129309438 129309562 -73775970 + AluJb SINE Alu 1 119 -183 1496 161 13 74 chr5 129309562 129309873 -73775659 - AluSx SINE Alu -20 292 1 1062 236 79 45 chr5 129309873 129310040 -73775492 + AluJb SINE Alu 119 302 0 1205 273 52 21 chr5 129310040 129310107 -73775425 + L1MEc LINE L1 1608 1671 -4936 1227 183 148 0 chr5 129310111 129310374 -73775158 + L1MCa LINE L1 19 320 -6106 4219 169 110 16 chr5 129310384 129311355 -73774177 + L1MCa LINE L1 552 1758 -4668 1548 191 28 19 chr5 129311355 129311717 -73773815 - MLT1A1 LTR MaLR 0 365 1 4219 169 110 16 chr5 129311717 129311900 -73773632 + L1MCa LINE L1 1758 1922 -4504 296 249 103 66 chr5 129311895 129312108 -73773424 + L1MEc LINE L1 1665 1885 -4722 * 785 191 0 0 chr5 129312088 129312229 -73773303 + L1MEc LINE L1 180 320 -6106 242 108 0 0 chr5 129312238 129312275 -73773257 + L1MEc LINE L1 550 586 -5840 344 22 0 22 chr5 129312374 129312420 -73773112 + (CA)n Simple_repeat Simple_repeat 1 45 0 393 75 0 0 chr5 129312420 129312473 -73773059 + (TC)n Simple_repeat Simple_repeat 2 54 0 1082 254 82 20 chr5 129312475 129312976 -73772556 + L1MEc LINE L1 1980 2511 -4096 830 212 7 0 chr5 129312977 129313123 -73772409 + AluJ SINE Alu 136 282 -30 928 239 59 42 chr5 129313157 129313286 -73772246 + L1MEc LINE L1 2484 2609 -3817 2601 116 0 3 chr5 129313286 129313649 -73771883 - THE1B LTR MaLR 0 364 3 9621 121 45 41 chr5 129313649 129315222 -73770310 - THE1B-int LTR MaLR 0 1580 1 2538 122 0 14 chr5 129315222 129315591 -73769941 - THE1B LTR MaLR 0 364 1 928 239 59 42 chr5 129315591 129315885 -73769647 + L1MEc LINE L1 2608 2916 -3510 23 0 0 0 chr5 129315956 129315979 -73769553 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr5 129315996 129316022 -73769510 + AT_rich Low_complexity Low_complexity 1 26 0 6332 31 0 1 chr5 129316273 129317072 -73768460 - L1P LINE L1 -914 5232 4435 6090 34 7 0 chr5 129317071 129317855 -73767677 + L1PA4 LINE L1 5369 6157 0 * 706 200 0 72 chr5 129317988 129318059 -73767473 - MER63A DNA MER1_type -1518 170 95 2394 114 0 0 chr5 129318059 129318366 -73767166 + AluSg SINE Alu 1 307 -3 706 200 0 72 chr5 129318366 129318474 -73767058 - MER63A DNA MER1_type -1593 95 4 268 304 188 25 chr5 129318485 129318761 -73766771 + L1MC/D LINE L1 5506 5826 -1982 914 324 52 42 chr5 129318767 129319388 -73766144 + L1MA6 LINE L1 68 694 -6155 4005 249 26 16 chr5 129319842 129321116 -73764416 + L1MA6 LINE L1 1386 2671 -4178 3428 18 0 8 chr5 129321434 129321833 -73763699 - L1PA3 LINE L1 0 6155 5760 659 269 6 18 chr5 129321895 129322062 -73763470 + FAM SINE Alu 1 165 -10 13162 175 37 34 chr5 129322082 129325132 -73760400 + L1MA6 LINE L1 2915 5975 -1027 180 0 0 0 chr5 129325132 129325152 -73760380 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13162 175 37 34 chr5 129325152 129326183 -73759349 + L1MA6 LINE L1 5975 7001 -1 742 311 104 2 chr5 129326515 129326917 -73758615 + L1ME4a LINE L1 5505 5947 -174 231 167 0 0 chr5 129326930 129326966 -73758566 + MER34C LTR ERV1 1 36 -549 * 1120 197 119 60 chr5 129326937 129327384 -73758148 + MER39 LTR ERV1 8 662 -45 306 242 26 85 chr5 129327841 129327994 -73757538 - MER103 DNA DNA 0 166 23 1766 127 63 27 chr5 129328679 129329010 -73756522 - MER61A LTR ERV1 0 343 1 19504 108 43 14 chr5 129329010 129332708 -73752824 - MER61A-int LTR ERV1 0 6066 1320 2932 173 105 22 chr5 129332701 129333418 -73752114 - MER61A-int LTR ERV1 -4440 777 2 * 1487 117 163 20 chr5 129333419 129333719 -73751813 - MER61A LTR ERV1 0 343 1 283 160 27 13 chr5 129333723 129333798 -73751734 + GA-rich Low_complexity Low_complexity 2 77 0 310 320 68 21 chr5 129334404 129334685 -73750847 + L1ME4a LINE L1 5504 5797 -324 542 262 90 94 chr5 129334691 129334947 -73750585 + MIR SINE MIR 4 258 -4 9618 140 43 23 chr5 129334955 129336716 -73748816 - Tigger2 DNA MER2_type -10 2708 912 769 135 9 0 chr5 129336742 129336853 -73748679 - AluJb SINE Alu -52 260 149 672 157 9 0 chr5 129336853 129336968 -73748564 - Tigger2 DNA MER2_type -1804 914 799 3046 144 19 9 chr5 129336970 129337510 -73748022 - Tigger2 DNA MER2_type -2173 545 1 293 163 38 12 chr5 129337668 129337748 -73747784 + L1ME4a LINE L1 5988 6069 -52 6226 147 50 8 chr5 129337896 129339004 -73746528 + ERVL-B1 LTR ERVL 4604 5757 -7 1664 182 91 11 chr5 129339005 129339367 -73746165 + MLT2B1 LTR ERVL 2 392 -128 531 82 0 0 chr5 129339367 129339440 -73746092 + (CA)n Simple_repeat Simple_repeat 1 73 0 656 269 74 53 chr5 129339538 129340437 -73745095 + L1MEd LINE L1 783 1734 -4445 246 298 96 90 chr5 129340850 129341038 -73744494 + MLT1K LTR MaLR 212 400 -188 514 98 24 0 chr5 129341444 129341526 -73744006 - L1PA15 LINE L1 -13 6152 6069 1386 202 116 39 chr5 129342426 129342829 -73742703 - MLT1C LTR MaLR 0 467 18 688 241 52 21 chr5 129344054 129344245 -73741287 - MIR SINE MIR -12 250 54 304 263 97 18 chr5 129345655 129345769 -73739763 + MIR SINE MIR 20 142 -120 523 216 22 30 chr5 129345880 129346014 -73739518 - MIR SINE MIR -106 156 24 217 230 237 29 chr5 129347107 129347246 -73738286 + MIR SINE MIR 83 250 -12 334 376 24 24 chr5 129347381 129347679 -73737853 + ERVL LTR ERVL 5065 5362 -402 1110 341 119 20 chr5 129348319 129349341 -73736191 - L2 LINE L2 -1968 1346 223 312 70 0 0 chr5 129349411 129349454 -73736078 + (ATG)n Simple_repeat Simple_repeat 2 44 0 238 262 0 33 chr5 129349542 129349603 -73735929 + MIR SINE MIR 59 117 -145 262 296 25 12 chr5 129350267 129350348 -73735184 + L2 LINE L2 3186 3267 -5 296 283 59 20 chr5 129350443 129350595 -73734937 + HAL1 LINE L1 1586 1743 -764 2313 100 7 0 chr5 129351021 129351320 -73734212 + AluSp SINE Alu 1 301 -12 274 145 23 41 chr5 129351549 129351636 -73733896 - L1ME LINE L1 -712 5450 5369 27 0 0 0 chr5 129351672 129351699 -73733833 + AT_rich Low_complexity Low_complexity 1 27 0 1943 147 14 0 chr5 129351715 129352000 -73733532 - AluSx SINE Alu -23 289 1 375 226 38 23 chr5 129352002 129352135 -73733397 - L1ME LINE L1 -774 5390 5256 332 276 31 56 chr5 129352142 129352464 -73733068 + L1M4 LINE L1 2858 3171 -2975 1191 282 120 18 chr5 129352756 129353582 -73731950 + L1M4 LINE L1 3593 4502 -1644 514 260 221 5 chr5 129357118 129357322 -73728210 - MIR SINE MIR -3 259 12 267 372 41 0 chr5 129357843 129357964 -73727568 - MIR SINE MIR -79 183 58 353 294 88 12 chr5 129358468 129358628 -73726904 - MIR SINE MIR -1 261 90 2982 103 15 2 chr5 129358694 129359102 -73726430 + MLT2A2 LTR ERVL 1 413 -40 423 186 0 21 chr5 129359118 129359258 -73726274 + (TA)n Simple_repeat Simple_repeat 2 138 0 362 111 0 0 chr5 129359263 129359317 -73726215 + MLT2A2 LTR ERVL 400 453 0 289 245 88 10 chr5 129359959 129360061 -73725471 - MIR SINE MIR -64 144 35 495 261 15 8 chr5 129364304 129364434 -73721098 + MIR SINE MIR 24 154 -108 222 191 0 0 chr5 129364749 129364796 -73720736 + L2 LINE L2 3007 3053 -219 225 321 0 0 chr5 129364978 129365034 -73720498 + L2 LINE L2 3207 3262 -10 1107 258 61 81 chr5 129365249 129365774 -73719758 + MLT2F LTR ERVL 86 599 -64 2250 115 0 3 chr5 129365774 129366079 -73719453 - AluSg SINE Alu -6 304 1 1107 258 61 81 chr5 129366079 129366143 -73719389 + MLT2F LTR ERVL 599 663 0 193 286 16 0 chr5 129368560 129368623 -73716909 + L2 LINE L2 2996 3059 -213 2113 119 41 54 chr5 129368736 129369105 -73716427 + THE1B LTR MaLR 1 364 0 469 272 228 0 chr5 129369116 129369318 -73716214 + MIR SINE MIR 8 255 -7 2062 159 72 97 chr5 129369615 129370019 -73715513 - MER70A LTR ERVL 0 472 80 2379 105 0 3 chr5 129370019 129370333 -73715199 - AluSp SINE Alu 0 313 1 2062 159 72 97 chr5 129370333 129370412 -73715120 - MER70A LTR ERVL -392 80 1 1206 250 153 24 chr5 129372575 129372931 -73712601 + L1MC4a LINE L1 5539 5967 -1841 711 162 88 70 chr5 129372931 129373159 -73712373 - MER106A DNA MER1_type 0 236 5 1206 250 153 24 chr5 129373159 129373254 -73712278 + L1MC4a LINE L1 5967 6048 -1760 195 42 0 0 chr5 129374021 129374045 -73711487 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 244 198 0 104 chr5 129374268 129374319 -73711213 + MIR SINE MIR 118 156 -106 1907 142 48 12 chr5 129374319 129374651 -73710881 - MER2 DNA MER2_type 0 344 1 244 198 0 104 chr5 129374651 129374695 -73710837 + MIR SINE MIR 156 203 -59 1770 146 18 0 chr5 129375475 129375737 -73709795 + MER7A DNA MER2_type 1 265 -81 353 151 0 55 chr5 129375737 129375810 -73709722 + Tigger2 DNA MER2_type 2 70 -2648 2525 128 34 27 chr5 129375810 129376223 -73709309 + Tigger2 DNA MER2_type 2303 2718 0 476 186 23 0 chr5 129376223 129376308 -73709224 + MER7A DNA MER2_type 250 336 0 251 259 9 0 chr5 129376316 129376428 -73709104 + (TA)n Simple_repeat Simple_repeat 1 113 0 26 0 0 0 chr5 129376574 129376600 -73708932 + AT_rich Low_complexity Low_complexity 1 26 0 484 243 186 33 chr5 129376621 129376831 -73708701 - L1ME LINE L1 -420 5701 5460 238 164 55 55 chr5 129376983 129377038 -73708494 - MLT1A1 LTR MaLR 0 374 320 31 58 0 0 chr5 129377074 129377126 -73708406 + AT_rich Low_complexity Low_complexity 1 52 0 633 49 0 0 chr5 129377126 129377207 -73708325 + (CA)n Simple_repeat Simple_repeat 2 82 0 1612 133 63 7 chr5 129377207 129377477 -73708055 - MLT1A1 LTR MaLR -80 285 1 209 349 16 0 chr5 129377752 129377815 -73707717 + L2 LINE L2 3000 3063 -209 22 0 0 0 chr5 129377889 129377911 -73707621 + AT_rich Low_complexity Low_complexity 1 22 0 1248 159 22 4 chr5 129377973 129378200 -73707332 - L1MA8 LINE L1 0 6291 6061 353 277 10 0 chr5 129379719 129379820 -73705712 + Charlie8 DNA MER1_type 96 197 -2220 180 0 0 0 chr5 129380396 129380416 -73705116 + (T)n Simple_repeat Simple_repeat 1 20 0 257 338 46 20 chr5 129382362 129382513 -73703019 + MIR SINE MIR 46 200 -62 34 42 0 0 chr5 129383626 129383674 -73701858 + AT_rich Low_complexity Low_complexity 1 48 0 373 188 25 25 chr5 129384258 129384338 -73701194 + MER116 DNA Mariner 1 80 0 21 0 0 0 chr5 129385795 129385816 -73699716 + AT_rich Low_complexity Low_complexity 1 21 0 249 230 27 14 chr5 129386081 129386155 -73699377 + MER5A DNA MER1_type 1 75 -114 * 452 180 9 12 chr5 129386147 129386256 -73699276 - MER5A DNA MER1_type -79 110 4 375 193 0 0 chr5 129387547 129387635 -73697897 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 381 80 0 0 chr5 129388386 129388436 -73697096 - L1PA8 LINE L1 -9 6163 6114 198 345 0 0 chr5 129388929 129388984 -73696548 + MIR SINE MIR 30 84 -124 616 301 149 19 chr5 129389122 129389431 -73696101 + MLT1K LTR MaLR 193 541 -47 261 180 0 0 chr5 129389444 129389494 -73696038 + CT-rich Low_complexity Low_complexity 4 53 0 180 205 26 0 chr5 129389533 129389572 -73695960 + MIR SINE MIR 85 124 -138 263 264 11 23 chr5 129391369 129391456 -73694076 - MIR SINE MIR -86 122 37 21 0 0 0 chr5 129391967 129391988 -73693544 + AT_rich Low_complexity Low_complexity 1 21 0 447 328 65 15 chr5 129392553 129392754 -73692778 + MIR SINE MIR 20 230 -32 490 157 227 0 chr5 129393092 129393233 -73692299 + MER33 DNA MER1_type 1 174 -97 2291 120 7 89 chr5 129393955 129393999 -73691533 + MLT1B LTR MaLR 1 47 -343 2466 77 3 0 chr5 129393999 129394297 -73691235 + AluSx SINE Alu 1 299 -13 2291 120 7 89 chr5 129394297 129394677 -73690855 + MLT1B LTR MaLR 47 390 0 253 177 42 62 chr5 129395827 129395923 -73689609 + L1ME4a LINE L1 5997 6090 -31 239 356 56 28 chr5 129396461 129396677 -73688855 - MIR SINE MIR -19 243 22 24 0 0 0 chr5 129397457 129397481 -73688051 + AT_rich Low_complexity Low_complexity 1 24 0 1768 188 3 0 chr5 129397492 129397790 -73687742 - AluJo SINE Alu -13 299 1 206 179 18 0 chr5 129398574 129398630 -73686902 + GA-rich Low_complexity Low_complexity 1 57 0 410 280 111 26 chr5 129398863 129399052 -73686480 - MLT1K LTR MaLR -2 586 382 1657 183 3 20 chr5 129399055 129399350 -73686182 - AluJb SINE Alu -22 290 1 683 264 84 16 chr5 129400449 129400922 -73684610 - MLT1G1 LTR MaLR 0 595 3 181 352 67 0 chr5 129401252 129401357 -73684175 + MIR SINE MIR 39 150 -58 1290 161 9 5 chr5 129401732 129401950 -73683582 + MER20 DNA MER1_type 1 219 0 622 263 107 5 chr5 129402612 129402836 -73682696 + MER112 DNA MER1_type 2 248 -12 185 338 0 0 chr5 129403021 129403092 -73682440 - L2 LINE L2 -2676 638 568 321 311 42 17 chr5 129404069 129404188 -73681344 + MLT1H LTR MaLR 29 150 -399 246 245 0 0 chr5 129404184 129404237 -73681295 + MLT1I LTR MaLR 91 143 -266 * 225 235 147 20 chr5 129404415 129404517 -73681015 + MLT1H LTR MaLR 433 547 -2 335 338 7 65 chr5 129405246 129405400 -73680132 + MER91A DNA MER1_type 52 196 0 506 214 21 118 chr5 129405940 129406127 -73679405 - MER69A DNA AcHobo -7 170 2 2778 107 33 17 chr5 129406481 129406902 -73678630 - MSTA LTR MaLR 0 428 1 183 45 91 23 chr5 129407063 129407107 -73678425 + T-rich Low_complexity Low_complexity 5 51 0 1957 118 7 17 chr5 129409342 129409657 -73675875 + AluSc SINE Alu 1 312 0 322 277 102 29 chr5 129409846 129409983 -73675549 + L2 LINE L2 3121 3267 -5 1945 245 90 42 chr5 129411044 129411091 -73674441 - MLT2F LTR ERVL -8 655 612 1250 169 19 0 chr5 129411091 129411304 -73674228 + MER20 DNA MER1_type 3 219 0 1945 245 90 42 chr5 129411304 129411881 -73673651 - MLT2F LTR ERVL -51 612 1 419 347 55 0 chr5 129412057 129412365 -73673167 + L1MC/D LINE L1 5373 5697 -2111 249 33 0 0 chr5 129413108 129413138 -73672394 + (TG)n Simple_repeat Simple_repeat 1 30 0 282 291 17 23 chr5 129413742 129413860 -73671672 - MIR SINE MIR -58 150 35 1264 187 4 9 chr5 129414315 129414612 -73670920 + MER2 DNA MER2_type 2 340 -5 511 345 25 21 chr5 129417942 129418177 -73667355 + MIR SINE MIR 10 245 -17 433 274 74 39 chr5 129418282 129418512 -73667020 - L2 LINE L2 -5 3267 3030 446 228 0 8 chr5 129418557 129418680 -73666852 + (TA)n Simple_repeat Simple_repeat 1 122 0 22 35 0 0 chr5 129418689 129418718 -73666814 + AT_rich Low_complexity Low_complexity 1 29 0 5016 154 18 40 chr5 129418718 129419835 -73665697 - L1MA9 LINE L1 -6 6285 5115 1941 165 0 13 chr5 129419835 129420151 -73665381 - AluSx SINE Alu 0 312 1 5016 154 18 40 chr5 129420151 129420267 -73665265 - L1MA9 LINE L1 -1176 5115 4998 499 295 74 30 chr5 129420292 129420625 -73664907 + MLT1J LTR MaLR 62 451 -60 285 325 81 0 chr5 129420697 129420820 -73664712 + MIR3 SINE MIR 28 160 -48 2169 187 49 6 chr5 129421306 129421772 -73663760 + MER66B LTR ERV1 1 486 0 371 263 35 70 chr5 129422131 129422330 -73663202 - MIR SINE MIR -65 143 3 194 0 39 0 chr5 129422941 129422967 -73662565 + (CA)n Simple_repeat Simple_repeat 1 27 0 225 218 59 119 chr5 129426580 129426644 -73658888 + MIR3 SINE MIR 65 122 -86 1931 98 8 0 chr5 129426644 129426908 -73658624 - AluSc SINE Alu -7 302 37 225 218 59 119 chr5 129426908 129426944 -73658588 + MIR3 SINE MIR 122 159 -49 180 0 0 0 chr5 129427732 129427752 -73657780 + (A)n Simple_repeat Simple_repeat 1 20 0 227 173 19 0 chr5 129428487 129428539 -73656993 + T-rich Low_complexity Low_complexity 4 56 0 26 30 0 0 chr5 129429538 129429571 -73655961 + AT_rich Low_complexity Low_complexity 1 33 0 281 89 22 0 chr5 129431122 129431167 -73654365 + (TG)n Simple_repeat Simple_repeat 1 46 0 2149 101 0 23 chr5 129432932 129433238 -73652294 + AluSg1 SINE Alu 1 299 -10 216 0 0 0 chr5 129433629 129433653 -73651879 + (A)n Simple_repeat Simple_repeat 1 24 0 520 213 17 58 chr5 129435922 129436096 -73649436 + MIR SINE MIR 49 215 -47 195 269 0 39 chr5 129437734 129437786 -73647746 - L2 LINE L2 -37 3235 3186 416 347 99 31 chr5 129438072 129438294 -73647238 + L2 LINE L2 2921 3157 -115 396 103 0 0 chr5 129439656 129439714 -73645818 + (TG)n Simple_repeat Simple_repeat 2 59 0 335 329 130 28 chr5 129440644 129440860 -73644672 + MIR SINE MIR 12 249 -13 358 276 119 0 chr5 129441073 129441207 -73644325 + MER5A DNA MER1_type 33 182 -7 23 33 0 0 chr5 129442363 129442393 -73643139 + AT_rich Low_complexity Low_complexity 1 30 0 184 369 46 31 chr5 129444669 129444799 -73640733 + L2 LINE L2 3181 3312 -1 209 83 28 0 chr5 129444913 129444949 -73640583 + (TAAAAA)n Simple_repeat Simple_repeat 6 42 0 307 112 141 176 chr5 129445389 129445559 -73639973 - MER53 DNA DNA -25 164 1 1102 111 0 0 chr5 129445652 129445796 -73639736 - AluSg/x SINE Alu -13 299 156 1081 219 39 86 chr5 129447671 129448209 -73637323 + MER113 DNA MER1_type? 9 521 0 189 0 0 0 chr5 129450920 129450941 -73634591 + (A)n Simple_repeat Simple_repeat 1 21 0 2208 98 0 23 chr5 129450946 129451252 -73634280 + AluSx SINE Alu 1 299 -13 297 0 0 0 chr5 129452739 129452772 -73632760 + (TGG)n Simple_repeat Simple_repeat 3 35 0 309 246 184 25 chr5 129452774 129452991 -73632541 + MIR SINE MIR 7 255 -7 379 261 11 0 chr5 129455749 129455837 -73629695 + L2 LINE L2 3221 3309 -4 198 316 25 13 chr5 129456470 129456549 -73628983 - MIR3 SINE MIR -1 207 128 232 239 0 0 chr5 129456733 129456779 -73628753 + CT-rich Low_complexity Low_complexity 4 49 0 22 0 0 0 chr5 129457706 129457728 -73627804 + AT_rich Low_complexity Low_complexity 1 22 0 297 75 0 0 chr5 129459126 129459166 -73626366 + (CA)n Simple_repeat Simple_repeat 1 40 0 258 250 0 0 chr5 129461209 129461265 -73624267 + MARNA DNA Mariner 158 213 -373 319 239 103 32 chr5 129461333 129461488 -73624044 + MARNA DNA Mariner 327 492 -94 298 318 0 0 chr5 129463145 129463230 -73622302 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 252 0 0 0 chr5 129463786 129463814 -73621718 + (TG)n Simple_repeat Simple_repeat 2 29 0 194 103 0 26 chr5 129465637 129465676 -73619856 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 226 262 16 0 chr5 129466973 129467034 -73618498 + MIR SINE MIR 78 139 -69 2268 118 0 0 chr5 129468632 129468937 -73616595 + AluSx SINE Alu 1 305 -7 183 164 14 41 chr5 129469172 129469245 -73616287 + CT-rich Low_complexity Low_complexity 1 71 0 212 260 205 24 chr5 129469250 129469377 -73616155 - L2 LINE L2 -1 3312 3163 671 114 19 0 chr5 129469381 129469521 -73616011 + AluSg/x SINE Alu 189 330 0 215 61 30 0 chr5 129470124 129470157 -73615375 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 282 325 107 6 chr5 129471197 129471366 -73614166 + MIR SINE MIR 47 232 -30 207 162 0 0 chr5 129471946 129471983 -73613549 + A-rich Low_complexity Low_complexity 1 37 0 2152 118 3 3 chr5 129472432 129472728 -73612804 + AluSx SINE Alu 1 296 -16 323 161 0 0 chr5 129475196 129475252 -73610280 - Alu SINE Alu -246 56 1 26 0 0 0 chr5 129476262 129476288 -73609244 + AT_rich Low_complexity Low_complexity 1 26 0 666 183 21 65 chr5 129478278 129478464 -73607068 - MER96B DNA MER1_type? -239 178 1 400 254 41 132 chr5 129478630 129478972 -73606560 + L2 LINE L2 2217 2527 -787 394 319 43 7 chr5 129479067 129479205 -73606327 + L2 LINE L2 2897 3039 -233 293 268 165 31 chr5 129479197 129479294 -73606238 - L2 LINE L2 -2 3270 3161 * 635 295 92 10 chr5 129485109 129485316 -73600216 + MIR SINE MIR 2 225 -37 2116 111 0 20 chr5 129485573 129485870 -73599662 + AluSq SINE Alu 1 291 -22 218 331 114 33 chr5 129486012 129486196 -73599336 - MIR3 SINE MIR -7 201 3 1993 136 3 7 chr5 129486456 129486751 -73598781 + AluSq SINE Alu 1 294 -19 1949 114 13 30 chr5 129488365 129488664 -73596868 - AluSc SINE Alu -15 294 1 295 232 21 11 chr5 129490150 129490245 -73595287 + Charlie8 DNA MER1_type 73 168 -2249 348 94 0 0 chr5 129490280 129490333 -73595199 + (CA)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr5 129491528 129491548 -73593984 + (AGGGGG)n Simple_repeat Simple_repeat 4 23 0 25 0 0 0 chr5 129493081 129493106 -73592426 + AT_rich Low_complexity Low_complexity 1 25 0 423 232 91 83 chr5 129493470 129493711 -73591821 + MER102b DNA MER1_type 86 328 -13 416 257 10 20 chr5 129494296 129494397 -73591135 + MIR3 SINE MIR 87 186 -22 368 170 91 19 chr5 129495251 129495383 -73590149 + MIR SINE MIR 15 160 -73 222 189 0 0 chr5 129495536 129495573 -73589959 + polypyrimidine Low_complexity Low_complexity 1 37 0 327 288 131 25 chr5 129495752 129495912 -73589620 - MIR SINE MIR -14 248 72 2059 152 30 6 chr5 129495913 129496248 -73589284 + MER2 DNA MER2_type 1 343 -1 870 78 0 9 chr5 129497846 129497961 -73587571 - L1MA3 LINE L1 0 6305 6192 2229 114 3 0 chr5 129497975 129498272 -73587260 - AluSp SINE Alu -14 299 2 6438 87 18 9 chr5 129498455 129499358 -73586174 - L1PA11 LINE L1 0 6174 5265 322 292 49 49 chr5 129499397 129499541 -73585991 - MIR3 SINE MIR -59 149 6 190 225 81 135 chr5 129499619 129499730 -73585802 - L2 LINE L2 -21 3251 3147 692 236 101 29 chr5 129501890 129502098 -73583434 + MER46C DNA MER2_type 2 224 -114 327 49 0 0 chr5 129504511 129504552 -73580980 + (CA)n Simple_repeat Simple_repeat 2 42 0 801 294 183 24 chr5 129504620 129505317 -73580215 + L2 LINE L2 2514 3312 -1 382 303 159 14 chr5 129505442 129505650 -73579882 + L3 LINE CR1 1311 1548 -29 2198 109 7 0 chr5 129508164 129508458 -73577074 - AluJb SINE Alu -16 296 1 799 242 6 6 chr5 129508512 129508690 -73576842 - MER5B DNA MER1_type 0 178 1 486 46 0 0 chr5 129509618 129509683 -73575849 + (CA)n Simple_repeat Simple_repeat 2 66 0 522 183 67 0 chr5 129510008 129510112 -73575420 - L2 LINE L2 -15 3298 3188 293 318 53 0 chr5 129510109 129510241 -73575291 + MIR SINE MIR 49 187 -75 * 181 238 79 32 chr5 129510724 129510787 -73574745 - L2 LINE L2 -1 3312 3247 215 333 44 0 chr5 129511116 129511206 -73574326 + L2 LINE L2 2967 3060 -212 205 393 16 0 chr5 129511377 129511438 -73574094 - L2 LINE L2 -86 3186 3125 2129 138 0 9 chr5 129514100 129514426 -73571106 + L1MA5 LINE L1 5976 6298 -2 1785 169 10 7 chr5 129514585 129514887 -73570645 + L1PA16 LINE L1 5861 6163 -3 756 253 136 18 chr5 129515742 129515963 -73569569 - MIR SINE MIR -14 248 2 219 213 16 82 chr5 129515997 129516058 -73569474 - L2 LINE L2 -9 3263 3207 2904 134 17 63 chr5 129516483 129517042 -73568490 + LTR10A LTR ERV1 12 555 -54 201 176 0 0 chr5 129518115 129518149 -73567383 + T-rich Low_complexity Low_complexity 1 34 0 322 318 119 51 chr5 129519264 129519717 -73565815 + L2 LINE L2 2830 3313 0 205 152 0 0 chr5 129521051 129521084 -73564448 + C-rich Low_complexity Low_complexity 2 34 0 252 0 0 0 chr5 129521743 129521771 -73563761 + (A)n Simple_repeat Simple_repeat 1 28 0 209 271 110 76 chr5 129522107 129522225 -73563307 - MIR3 SINE MIR -5 203 82 181 399 75 8 chr5 129522384 129522517 -73563015 + MIR SINE MIR 50 191 -71 2260 86 3 10 chr5 129522771 129523098 -73562434 + AluSc SINE Alu 1 309 0 23 0 0 0 chr5 129523607 129523630 -73561902 + AT_rich Low_complexity Low_complexity 1 23 0 276 30 0 0 chr5 129524462 129524495 -73561037 + (TG)n Simple_repeat Simple_repeat 2 34 0 27 0 0 0 chr5 129524711 129524738 -73560794 + AT_rich Low_complexity Low_complexity 1 27 0 2244 99 0 0 chr5 129526427 129526737 -73558795 + AluSx SINE Alu 1 310 0 1814 161 0 32 chr5 129529159 129529475 -73556057 - AluJb SINE Alu -6 306 1 2333 152 26 128 chr5 129529688 129530165 -73555367 + LTR10A LTR ERV1 1 402 -207 2318 89 3 0 chr5 129530165 129530457 -73555075 + AluSq SINE Alu 1 293 -20 2333 152 26 128 chr5 129530457 129530597 -73554935 + LTR10A LTR ERV1 402 555 -54 578 270 145 0 chr5 129531347 129531506 -73554026 - MER5A DNA MER1_type 0 189 8 225 0 0 0 chr5 129532611 129532636 -73552896 + (A)n Simple_repeat Simple_repeat 1 25 0 186 340 82 0 chr5 129535683 129535780 -73549752 - MER5B DNA MER1_type 0 178 74 447 19 0 0 chr5 129536191 129536243 -73549289 + (CA)n Simple_repeat Simple_repeat 1 52 0 908 237 60 0 chr5 129536314 129536529 -73549003 - MIR SINE MIR 0 262 35 1378 156 75 35 chr5 129540444 129540726 -73544806 + AluJo SINE Alu 1 293 -19 734 247 174 5 chr5 129541331 129541550 -73543982 - MIR SINE MIR -2 260 5 1496 155 64 0 chr5 129542116 129542367 -73543165 - AluSx SINE Alu -13 299 33 762 259 72 15 chr5 129542367 129542624 -73542908 - HsTC2 DNA Tc2 -105 1793 1522 1062 64 0 21 chr5 129543174 129543314 -73542218 - L1PA8 LINE L1 -2 6170 6034 2203 108 114 11 chr5 129543816 129544177 -73541355 + MER48 LTR ERV1 1 398 0 353 333 7 0 chr5 129544271 129544421 -73541111 + L2 LINE L2 2398 2548 -766 323 306 101 67 chr5 129544427 129545022 -73540510 + L2 LINE L2 2671 3271 -1 30 0 0 0 chr5 129545543 129545573 -73539959 + AT_rich Low_complexity Low_complexity 1 30 0 543 283 80 36 chr5 129545579 129545830 -73539702 + MIR SINE MIR 1 262 0 21 0 0 0 chr5 129546526 129546547 -73538985 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 129549692 129549716 -73535816 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 129551706 129551731 -73533801 + AT_rich Low_complexity Low_complexity 1 25 0 488 290 98 11 chr5 129552038 129552221 -73533311 - MIR SINE MIR 0 262 64 334 296 111 35 chr5 129552788 129552987 -73532545 - MIR SINE MIR -48 214 1 227 154 0 19 chr5 129553387 129553439 -73532093 + (CA)n Simple_repeat Simple_repeat 2 52 0 1415 255 87 39 chr5 129553542 129554546 -73530986 - L2 LINE L2 -1 3312 2207 21 0 0 0 chr5 129556506 129556527 -73529005 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 129558463 129558495 -73527037 + GC_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr5 129558720 129558745 -73526787 + GC_rich Low_complexity Low_complexity 1 25 0 195 129 0 0 chr5 129559002 129559033 -73526499 + (A)n Simple_repeat Simple_repeat 1 31 0 310 266 139 17 chr5 129561990 129562163 -73523369 + MIR SINE MIR 13 206 -56 189 255 96 11 chr5 129562231 129562325 -73523207 - MIR3 SINE MIR -47 161 60 2503 61 0 13 chr5 129562351 129562663 -73522869 - AluY SINE Alu -3 308 1 458 329 181 46 chr5 129562920 129562997 -73522535 + L2 LINE L2 279 344 -2970 489 232 113 54 chr5 129562997 129563165 -73522367 + MER5B DNA MER1_type 1 178 0 458 329 181 46 chr5 129563165 129564165 -73521367 + L2 LINE L2 344 1208 -2106 2224 122 3 0 chr5 129564165 129564477 -73521055 - AluSq SINE Alu 0 313 1 458 329 181 46 chr5 129564477 129564682 -73520850 + L2 LINE L2 1208 1384 -1930 2332 85 7 3 chr5 129564682 129564988 -73520544 + AluY SINE Alu 2 308 -3 458 329 181 46 chr5 129564988 129565270 -73520262 + L2 LINE L2 1384 2056 -1258 355 279 101 55 chr5 129565615 129565997 -73519535 + L2 LINE L2 2646 3053 -219 1330 254 117 12 chr5 129568556 129569365 -73516167 + L2 LINE L2 2414 3313 0 1135 214 51 109 chr5 129569675 129570068 -73515464 - MLT1A2 LTR MaLR -4 370 1 25 31 0 0 chr5 129570323 129570355 -73515177 + AT_rich Low_complexity Low_complexity 1 32 0 400 330 40 30 chr5 129571463 129571663 -73513869 - MIR SINE MIR -39 223 22 207 0 0 0 chr5 129572219 129572242 -73513290 + (CAA)n Simple_repeat Simple_repeat 2 24 0 709 279 63 76 chr5 129572258 129573136 -73512396 + L1MC4a LINE L1 4917 5636 -534 1578 136 43 11 chr5 129573136 129573416 -73512116 + L1MA6 LINE L1 6012 6300 0 709 279 63 76 chr5 129573416 129573537 -73511995 + L1MC4a LINE L1 5636 5757 -413 7663 39 24 3 chr5 129573670 129574937 -73510595 + L1PA5 LINE L1 4870 6154 0 1415 164 20 169 chr5 129574999 129575164 -73510368 + MLT1A2 LTR MaLR 1 62 -312 2221 133 0 0 chr5 129575164 129575466 -73510066 + AluSx SINE Alu 1 302 -10 1415 164 20 169 chr5 129575466 129575739 -73509793 + MLT1A2 LTR MaLR 62 374 0 27 96 0 0 chr5 129576039 129576122 -73509410 + AT_rich Low_complexity Low_complexity 1 83 0 521 291 92 22 chr5 129576317 129576588 -73508944 - L1ME LINE L1 -303 5818 5529 266 172 108 32 chr5 129576954 129577047 -73508485 + MLT1K LTR MaLR 400 499 -89 273 369 164 0 chr5 129577048 129577170 -73508362 + MER91A DNA MER1_type 5 146 -50 216 143 0 0 chr5 129577180 129577222 -73508310 + (T)n Simple_repeat Simple_repeat 1 42 0 456 214 0 10 chr5 129577312 129577410 -73508122 + MLT1K LTR MaLR 492 588 0 233 310 120 28 chr5 129577420 129577579 -73507953 - MIR3 SINE MIR -16 192 20 190 319 73 26 chr5 129578660 129578851 -73506681 + L2 LINE L2 1616 1815 -1499 934 338 157 11 chr5 129578959 129579583 -73505949 + L2 LINE L2 2054 2768 -546 377 354 24 0 chr5 129579599 129579726 -73505806 + L2 LINE L2 3184 3313 0 197 205 26 0 chr5 129581273 129581312 -73504220 - MIR SINE MIR 0 262 223 1047 180 5 36 chr5 129581339 129581436 -73504096 - MER5A DNA MER1_type -1 188 98 2399 136 68 22 chr5 129581436 129581849 -73503683 + MSTB1 LTR MaLR 1 432 0 1047 180 5 36 chr5 129581849 129581945 -73503587 - MER5A DNA MER1_type -91 98 1 365 281 49 69 chr5 129582212 129582415 -73503117 - MIR SINE MIR -52 210 12 1780 154 0 18 chr5 129582563 129582849 -73502683 - AluSx SINE Alu -31 281 1 219 186 0 0 chr5 129584329 129584372 -73501160 + (CTA)n Simple_repeat Simple_repeat 1 43 0 472 266 82 74 chr5 129584521 129584765 -73500767 - L2 LINE L2 -2 3311 3066 1562 177 46 3 chr5 129584767 129585207 -73500325 - MLT1D LTR MaLR -6 499 22 469 269 86 38 chr5 129585224 129585570 -73499962 - L2 LINE L2 -250 3063 2703 22 35 0 0 chr5 129585986 129586015 -73499517 + AT_rich Low_complexity Low_complexity 1 29 0 222 368 70 6 chr5 129586120 129586291 -73499241 - L3 LINE CR1 -1205 372 191 1551 248 15 0 chr5 129587896 129588231 -73497301 - MER58B DNA MER1_type 0 341 2 404 317 25 6 chr5 129588274 129588434 -73497098 - MIR SINE MIR 0 262 100 332 327 233 0 chr5 129588434 129588584 -73496948 + MER91A DNA MER1_type 1 185 -11 317 268 37 0 chr5 129588588 129588670 -73496862 - MIR SINE MIR -155 107 23 182 324 65 50 chr5 129589551 129589690 -73495842 + L2 LINE L2 2921 3061 -211 400 297 113 21 chr5 129591247 129591486 -73494046 + MIR SINE MIR 2 262 0 399 292 63 89 chr5 129591764 129592376 -73493156 - MLT1L LTR MaLR 0 615 29 3068 108 14 30 chr5 129592383 129592712 -73492820 - MSTA LTR MaLR 0 428 105 1880 140 18 7 chr5 129592712 129593018 -73492514 + AluSx SINE Alu 1 309 0 3068 108 14 30 chr5 129593018 129593122 -73492410 - MSTA LTR MaLR -323 105 1 740 266 116 40 chr5 129593851 129594231 -73491301 - MLT1I LTR MaLR 0 409 1 274 239 92 43 chr5 129594630 129594793 -73490739 + L1ME4a LINE L1 5921 6091 -30 2070 191 93 84 chr5 129594857 129595489 -73490043 + MLT1E1 LTR MaLR 1 638 -16 216 0 0 0 chr5 129595489 129595513 -73490019 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr5 129595582 129595604 -73489928 + AT_rich Low_complexity Low_complexity 1 22 0 665 193 153 11 chr5 129595607 129595783 -73489749 + L1ME3 LINE L1 5961 6161 -1 931 154 7 0 chr5 129595881 129596030 -73489502 - L1MB4 LINE L1 0 6180 6031 292 347 48 8 chr5 129596681 129596805 -73488727 + L2 LINE L2 3138 3266 -6 219 139 0 0 chr5 129597899 129597935 -73487597 + (TG)n Simple_repeat Simple_repeat 1 36 0 338 255 0 10 chr5 129598157 129598255 -73487277 - MIR SINE MIR -80 128 32 2344 88 3 3 chr5 129598851 129599157 -73486375 + AluSx SINE Alu 1 306 -6 325 281 126 7 chr5 129599174 129599309 -73486223 + MIR SINE MIR 36 186 -76 3229 70 28 48 chr5 129600138 129600595 -73484937 - LTR7 LTR ERV1 -2 448 1 727 262 34 21 chr5 129601492 129601725 -73483807 + MIR SINE MIR 3 238 -24 2375 35 0 28 chr5 129602389 129602677 -73482855 + AluY SINE Alu 3 282 -29 198 0 0 0 chr5 129602677 129602699 -73482833 + (TA)n Simple_repeat Simple_repeat 2 23 0 2909 16 0 0 chr5 129602878 129603195 -73482337 + AluYb8 SINE Alu 1 317 -1 2695 88 128 5 chr5 129603575 129603974 -73481558 - LTR7 LTR ERV1 -2 448 1 2316 97 0 13 chr5 129603980 129604290 -73481242 - AluSg SINE Alu -4 306 1 348 368 45 8 chr5 129604340 129604473 -73481059 + L2 LINE L2 3116 3253 -19 23 0 0 0 chr5 129604798 129604821 -73480711 + AT_rich Low_complexity Low_complexity 1 23 0 305 283 98 64 chr5 129605363 129605536 -73479996 - MER5A DNA MER1_type 0 189 11 1800 145 16 10 chr5 129605599 129605903 -73479629 + L1PB1 LINE L1 5808 6113 -38 4270 105 5 0 chr5 129607868 129608419 -73477113 - MER41A LTR ERV1 0 554 1 281 309 0 0 chr5 129608653 129608721 -73476811 - MIR3 SINE MIR -43 165 98 528 300 95 0 chr5 129608880 129609080 -73476452 - MIR SINE MIR -7 255 37 454 267 60 0 chr5 129611552 129611700 -73473832 - MIR SINE MIR -48 214 54 1083 180 34 19 chr5 129611827 129612033 -73473499 - MER3 DNA MER1_type 0 209 1 463 254 27 0 chr5 129612362 129612472 -73473060 + LTR33 LTR ERVL 5 117 -404 1548 324 62 45 chr5 129612560 129613909 -73471623 + ERVL LTR ERVL 3248 4964 -800 947 258 43 57 chr5 129614410 129614832 -73470700 + LTR16A LTR ERVL 19 434 -16 268 244 171 12 chr5 129614875 129614957 -73470575 + LTR33 LTR ERVL 423 517 -4 340 67 0 0 chr5 129615121 129615166 -73470366 - MADE1 DNA Mariner -35 45 1 183 42 0 0 chr5 129615303 129615327 -73470205 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 279 0 0 0 chr5 129615326 129615357 -73470175 + (TG)n Simple_repeat Simple_repeat 2 32 0 34 102 0 0 chr5 129615482 129615600 -73469932 + AT_rich Low_complexity Low_complexity 1 118 0 614 300 84 17 chr5 129615646 129616003 -73469529 + L1MC4a LINE L1 5542 5922 -206 232 261 152 42 chr5 129615791 129616074 -73469458 + L1MB4 LINE L1 5695 6008 -172 * 188 333 0 0 chr5 129616594 129616651 -73468881 - MIR3 SINE MIR -49 159 103 660 202 39 17 chr5 129617003 129617181 -73468351 - MER53 DNA DNA 0 189 8 209 352 23 11 chr5 129617322 129617410 -73468122 + L3 LINE CR1 1354 1442 -135 329 281 8 16 chr5 129617411 129617532 -73468000 + L1MC/D LINE L1 5688 5807 -2001 855 188 23 7 chr5 129617759 129618018 -73467514 + MSTB LTR MaLR 37 370 -56 2074 151 6 6 chr5 129618022 129618334 -73467198 - AluSx SINE Alu 0 312 1 2569 64 0 0 chr5 129618734 129619045 -73466487 + AluY SINE Alu 1 311 0 226 219 156 0 chr5 129619484 129619548 -73465984 - MER116 DNA Mariner -2 78 5 1215 197 16 76 chr5 129619686 129619900 -73465632 - MLT1A1 LTR MaLR -15 350 159 2412 96 3 3 chr5 129619900 129620212 -73465320 - AluSp SINE Alu -1 312 1 1215 197 16 76 chr5 129620212 129620312 -73465220 - MLT1A1 LTR MaLR -206 159 55 2681 118 11 0 chr5 129620321 129620678 -73464854 + MER1A DNA MER1_type 35 395 -134 2363 122 14 27 chr5 129620678 129621047 -73464485 - THE1B LTR MaLR 0 364 1 3259 71 0 5 chr5 129621047 129621455 -73464077 - THE1B-int LTR MaLR 0 1580 1175 612 297 96 13 chr5 129621493 129621732 -73463800 - MIR SINE MIR -2 260 2 738 220 91 8 chr5 129623226 129623434 -73462098 - L1ME3A LINE L1 -89 6076 5858 222 242 32 0 chr5 129623471 129623533 -73461999 + GA-rich Low_complexity Low_complexity 2 65 0 437 287 9 19 chr5 129624729 129624837 -73460695 - L2 LINE L2 -27 3286 3180 242 157 59 0 chr5 129624881 129624932 -73460600 - MLT2B1 LTR ERVL -10 510 457 3681 275 112 60 chr5 129624932 129626817 -73458715 - L2 LINE L2 -202 3111 1127 297 154 26 13 chr5 129626913 129626991 -73458541 + CT-rich Low_complexity Low_complexity 2 80 0 265 314 93 8 chr5 129627063 129627181 -73458351 - L2 LINE L2 -3 3310 3183 2018 245 74 87 chr5 129627302 129627899 -73457633 + MLT1G LTR MaLR 7 590 0 599 32 54 0 chr5 129628306 129628399 -73457133 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 4496 85 7 7 chr5 129628448 129629037 -73456495 - Charlie3 DNA MER1_type -4 2706 2118 2153 201 37 77 chr5 129629041 129629613 -73455919 - MLT2B3 LTR ERVL -5 549 1 16168 100 4 3 chr5 129629613 129631730 -73453802 - Charlie3 DNA MER1_type -588 2122 4 1732 115 50 4 chr5 129631732 129631992 -73453540 - MER7A DNA MER2_type -75 271 2 2582 48 7 0 chr5 129632116 129632425 -73453107 - AluY SINE Alu 0 311 1 2374 94 3 7 chr5 129632981 129633290 -73452242 - AluSp SINE Alu -5 308 1 766 254 34 38 chr5 129634626 129634890 -73450642 + MLT1K LTR MaLR 326 588 0 1350 153 146 7 chr5 129634996 129635304 -73450228 + L1MB4 LINE L1 5810 6160 -20 456 118 24 12 chr5 129635346 129635431 -73450101 + L1MB8 LINE L1 6093 6178 0 2240 94 3 3 chr5 129635621 129635918 -73449614 + AluSx SINE Alu 1 297 -15 182 364 73 9 chr5 129636171 129636281 -73449251 + L3 LINE CR1 1216 1332 -245 1874 174 26 0 chr5 129636288 129636592 -73448940 + AluJb SINE Alu 1 312 0 840 182 0 0 chr5 129636627 129636759 -73448773 + FLAM_C SINE Alu 1 132 -1 402 383 78 5 chr5 129636827 129637044 -73448488 + L3 LINE CR1 1342 1574 -3 2287 107 0 0 chr5 129637305 129637605 -73447927 - AluSg SINE Alu -10 300 1 1400 218 116 31 chr5 129639225 129639425 -73446107 - L1M LINE L1 -739 5423 5241 2017 139 3 10 chr5 129639425 129639727 -73445805 - AluJb SINE Alu -12 300 1 1400 218 116 31 chr5 129639727 129640101 -73445431 - L1M LINE L1 -921 5241 4798 243 79 0 0 chr5 129640161 129640199 -73445333 + (A)n Simple_repeat Simple_repeat 1 38 0 516 68 0 0 chr5 129640374 129640447 -73445085 - AluSq SINE Alu -6 307 235 1143 148 0 0 chr5 129640447 129640616 -73444916 - AluSq SINE Alu -144 169 1 553 298 164 35 chr5 129640898 129641267 -73444265 + L2 LINE L2 2681 3001 -312 1666 110 19 91 chr5 129641267 129641438 -73444094 - AluY SINE Alu -16 295 156 1990 85 4 0 chr5 129641438 129641696 -73443836 - AluY SINE Alu -2 309 51 1666 110 19 91 chr5 129641696 129641842 -73443690 - AluY SINE Alu -155 156 1 553 298 164 35 chr5 129641842 129641889 -73443643 + L2 LINE L2 3001 3041 -272 1103 218 89 34 chr5 129641889 129642136 -73443396 + MER2 DNA MER2_type 1 272 -72 2294 101 13 0 chr5 129642136 129642442 -73443090 - AluSg SINE Alu 0 310 1 1103 218 89 34 chr5 129642442 129642520 -73443012 + MER2 DNA MER2_type 272 344 0 553 298 164 35 chr5 129642520 129642677 -73442855 + L2 LINE L2 3041 3312 -1 2210 75 11 7 chr5 129642911 129643193 -73442339 - AluY SINE Alu -12 299 17 2309 97 3 0 chr5 129643899 129644198 -73441334 + AluSx SINE Alu 1 300 -12 797 172 14 7 chr5 129644602 129644714 -73440818 + MER2 DNA MER2_type 2 117 -228 1831 155 21 3 chr5 129644714 129645005 -73440527 - AluSx SINE Alu -16 296 1 797 172 14 7 chr5 129645005 129645037 -73440495 + MER2 DNA MER2_type 117 147 -198 681 147 21 49 chr5 129645082 129645213 -73440319 + MER2 DNA MER2_type 136 264 -81 1654 175 11 0 chr5 129645213 129645498 -73440034 - AluJo SINE Alu -22 290 3 681 147 21 49 chr5 129645498 129645509 -73440023 + MER2 DNA MER2_type 264 274 -71 372 191 0 83 chr5 129647276 129647360 -73438172 + MER2 DNA MER2_type 268 344 -1 321 356 126 9 chr5 129647360 129647590 -73437942 + L1M4 LINE L1 4033 4289 -1857 1406 142 0 23 chr5 129647699 129647917 -73437615 + AluJo SINE Alu 68 280 -32 192 125 0 0 chr5 129647939 129647971 -73437561 + (A)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 129647989 129648012 -73437520 + AT_rich Low_complexity Low_complexity 1 23 0 2156 120 0 10 chr5 129648065 129648365 -73437167 + AluSx SINE Alu 1 297 -15 910 208 0 0 chr5 129648729 129648888 -73436644 - FRAM SINE Alu -13 163 5 243 269 56 28 chr5 129648892 129649000 -73436532 + L1MC/D LINE L1 5694 5804 -2004 24 53 0 0 chr5 129649022 129649060 -73436472 + AT_rich Low_complexity Low_complexity 1 38 0 2198 123 0 0 chr5 129649071 129649371 -73436161 + AluSg SINE Alu 1 300 -10 185 179 0 36 chr5 129649419 129649475 -73436057 + (TATG)n Simple_repeat Simple_repeat 2 55 0 2307 90 0 7 chr5 129649674 129649973 -73435559 + AluSq SINE Alu 1 297 -16 23 68 0 0 chr5 129649986 129650030 -73435502 + AT_rich Low_complexity Low_complexity 1 44 0 30 0 0 0 chr5 129650181 129650211 -73435321 + AT_rich Low_complexity Low_complexity 1 30 0 1217 179 114 18 chr5 129650255 129650528 -73435004 + AluSx SINE Alu 1 299 -13 2362 112 0 0 chr5 129650531 129650843 -73434689 + AluSx SINE Alu 1 312 0 982 163 7 0 chr5 129650843 129650996 -73434536 + AluSg/x SINE Alu 132 285 -25 329 238 101 129 chr5 129651045 129651130 -73434402 - L1ME4a LINE L1 -239 5882 5796 2214 111 10 0 chr5 129651130 129651419 -73434113 - AluSx SINE Alu -20 292 1 329 238 101 129 chr5 129651419 129651619 -73433913 - L1ME4a LINE L1 -325 5796 5605 24 53 0 0 chr5 129652173 129652211 -73433321 + AT_rich Low_complexity Low_complexity 1 38 0 2154 133 0 3 chr5 129652615 129652924 -73432608 + AluSx SINE Alu 1 308 -4 1951 134 0 17 chr5 129653424 129653715 -73431817 - AluSx SINE Alu -11 301 16 4627 157 47 53 chr5 129653822 129654601 -73430931 - L1MC1 LINE L1 -66 6267 5485 853 151 7 0 chr5 129654601 129654740 -73430792 - FLAM_C SINE Alu -3 140 1 4627 157 47 53 chr5 129654740 129654825 -73430707 - L1MC1 LINE L1 -848 5485 5401 2274 106 7 0 chr5 129654825 129655128 -73430404 - AluSx SINE Alu -7 305 1 4627 157 47 53 chr5 129655128 129655230 -73430302 - L1MC1 LINE L1 -932 5401 5301 1260 104 0 23 chr5 129655230 129655403 -73430129 - L1PA10 LINE L1 -3 6165 5997 4627 157 47 53 chr5 129655403 129655445 -73430087 - L1MC1 LINE L1 -1032 5301 5260 1525 214 18 0 chr5 129655445 129655730 -73429802 - AluJo SINE Alu -22 290 1 2303 112 0 0 chr5 129656141 129656446 -73429086 - AluSq SINE Alu -8 305 1 2117 120 0 0 chr5 129656510 129656793 -73428739 - AluY SINE Alu -28 283 1 5155 144 16 56 chr5 129656800 129656847 -73428685 - L1MB3 LINE L1 0 6183 6136 1325 160 152 30 chr5 129656847 129657116 -73428416 - AluJo SINE Alu -10 302 1 5155 144 16 56 chr5 129657116 129657948 -73427584 - L1MB3 LINE L1 -47 6136 5350 2217 113 3 3 chr5 129657948 129658257 -73427275 - AluSp SINE Alu -4 309 1 5155 144 16 56 chr5 129658257 129658480 -73427052 - L1MB3 LINE L1 -833 5350 5120 859 279 13 9 chr5 129658730 129658963 -73426569 + MIR SINE MIR 3 236 -26 870 179 0 0 chr5 129659238 129659383 -73426149 + MLT1B LTR MaLR 193 337 -53 1378 123 13 146 chr5 129659383 129659500 -73426032 + AluJb SINE Alu 21 152 -160 2106 115 4 0 chr5 129659500 129659779 -73425753 + AluSx SINE Alu 1 280 -32 225 83 0 0 chr5 129659779 129659815 -73425717 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1378 123 13 146 chr5 129659815 129659827 -73425705 + AluJb SINE Alu 151 163 -149 2291 113 0 0 chr5 129659827 129660128 -73425404 + AluSx SINE Alu 1 301 -11 1378 123 13 146 chr5 129660128 129660276 -73425256 + AluJb SINE Alu 163 258 -54 2488 83 0 0 chr5 129660276 129660578 -73424954 - AluSg SINE Alu -7 303 2 1378 123 13 146 chr5 129660578 129660606 -73424926 + AluJb SINE Alu 258 288 -24 180 77 0 0 chr5 129660643 129660669 -73424863 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2029 151 0 0 chr5 129661021 129661326 -73424206 - AluJb SINE Alu -7 305 1 1124 195 0 66 chr5 129661841 129662097 -73423435 - AluSx SINE Alu -73 239 1 207 314 129 43 chr5 129662569 129662639 -73422893 + MIR SINE MIR 2 77 -185 1977 128 50 0 chr5 129662697 129662978 -73422554 - AluSx SINE Alu -17 295 1 237 280 229 0 chr5 129663001 129663119 -73422413 + MIR SINE MIR 100 244 -18 248 276 40 26 chr5 129664066 129664142 -73421390 + L2 LINE L2 2985 3061 -211 202 143 0 24 chr5 129664347 129664389 -73421143 + (CAA)n Simple_repeat Simple_repeat 2 42 0 623 242 36 64 chr5 129664946 129665165 -73420367 + MIR SINE MIR 33 245 -17 209 346 89 0 chr5 129665302 129665403 -73420129 + L2 LINE L2 3139 3248 -24 260 313 12 12 chr5 129665417 129665500 -73420032 + MIR SINE MIR 32 114 -94 1526 172 0 75 chr5 129667160 129667491 -73418041 - AluJb SINE Alu -5 307 2 2327 103 0 0 chr5 129667529 129667831 -73417701 - AluSx SINE Alu -10 302 1 2274 108 0 0 chr5 129667914 129668211 -73417321 - AluSg SINE Alu -13 297 1 373 207 46 11 chr5 129668447 129668534 -73416998 + MIR SINE MIR 103 192 -70 1243 177 0 5 chr5 129668538 129668753 -73416779 + AluJo SINE Alu 98 311 -1 1140 112 0 37 chr5 129669379 129669567 -73415965 + AluSg/x SINE Alu 129 309 -3 1316 184 0 51 chr5 129669580 129669836 -73415696 - AluJo SINE Alu -49 263 21 422 215 178 37 chr5 129669860 129669918 -73415614 - L1MC4 LINE L1 0 8042 7994 2303 93 0 13 chr5 129669918 129670219 -73415313 + AluSx SINE Alu 1 297 -15 422 215 178 37 chr5 129670219 129670351 -73415181 - L1MC4 LINE L1 -48 7994 7825 286 122 0 20 chr5 129670351 129670400 -73415132 + LTR54B LTR ERV1 1 48 -450 494 172 115 11 chr5 129670433 129670520 -73415012 + FLAM_A SINE Alu 18 113 -29 2407 97 0 3 chr5 129670523 129670833 -73414699 + AluSg SINE Alu 1 309 -1 297 0 0 0 chr5 129670833 129670866 -73414666 + (CA)n Simple_repeat Simple_repeat 2 34 0 821 212 144 31 chr5 129670885 129671028 -73414504 + LTR54B LTR ERV1 173 298 -200 2168 99 14 3 chr5 129671028 129671322 -73414210 - AluSg SINE Alu -13 297 1 821 212 144 31 chr5 129671322 129671470 -73414062 + LTR54B LTR ERV1 298 497 -1 648 188 137 60 chr5 129671470 129671704 -73413828 - L1MC4 LINE L1 -215 7827 7576 1696 138 52 31 chr5 129671739 129672029 -73413503 - AluJb SINE Alu -16 296 1 432 232 87 7 chr5 129672391 129672529 -73413003 + MLT1F LTR MaLR 388 536 -6 419 305 142 37 chr5 129672740 129673205 -73412327 + L2 LINE L2 1890 2403 -911 222 188 62 21 chr5 129673318 129673366 -73412166 + L2 LINE L2 3200 3249 -64 349 250 185 20 chr5 129673775 129673975 -73411557 + L1ME4a LINE L1 5787 6019 -102 1482 150 56 82 chr5 129673994 129674187 -73411345 - AluJb SINE Alu -14 298 114 225 0 0 0 chr5 129674187 129674212 -73411320 + (TG)n Simple_repeat Simple_repeat 2 26 0 1482 150 56 82 chr5 129674212 129674324 -73411208 - AluJb SINE Alu -198 114 1 2022 110 0 4 chr5 129674697 129674969 -73410563 + AluSx SINE Alu 1 271 -41 538 101 56 11 chr5 129675144 129675233 -73410299 - L1MB3 LINE L1 -9 6174 6082 194 0 0 37 chr5 129675290 129675317 -73410215 + (TCCCC)n Simple_repeat Simple_repeat 5 30 0 2036 108 7 14 chr5 129675318 129675613 -73409919 - AluSp SINE Alu -20 293 1 188 108 0 27 chr5 129675620 129675657 -73409875 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 514 120 0 20 chr5 129675736 129675836 -73409696 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 267 59 0 0 chr5 129675836 129675870 -73409662 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 1669 132 0 86 chr5 129675871 129676175 -73409357 - AluJb SINE Alu -34 278 1 2340 97 0 25 chr5 129676180 129676499 -73409033 - AluSq SINE Alu -1 312 2 269 26 26 0 chr5 129676543 129676581 -73408951 + (TA)n Simple_repeat Simple_repeat 1 39 0 318 195 230 0 chr5 129677882 129677969 -73407563 - L2 LINE L2 -6 3307 3201 747 230 80 38 chr5 129678019 129678232 -73407300 - MIR SINE MIR 0 262 41 325 336 0 9 chr5 129678259 129678375 -73407157 - MIR SINE MIR -62 200 86 2085 122 0 3 chr5 129678972 129679259 -73406273 + AluSq SINE Alu 1 286 -27 2182 100 14 0 chr5 129679271 129679562 -73405970 + AluSg SINE Alu 1 295 -15 243 0 0 0 chr5 129679563 129679590 -73405942 + (TA)n Simple_repeat Simple_repeat 1 27 0 1761 157 66 0 chr5 129679719 129679993 -73405539 - AluJo SINE Alu -20 292 1 24 32 0 0 chr5 129680507 129680538 -73404994 + AT_rich Low_complexity Low_complexity 1 31 0 493 303 193 16 chr5 129680931 129681433 -73404099 - L1MC4a LINE L1 -1903 5905 5315 2331 106 3 0 chr5 129681448 129681750 -73403782 - AluSp SINE Alu -10 303 1 572 131 36 0 chr5 129681893 129681977 -73403555 + Tigger5 DNA MER2_type 2237 2323 0 302 280 81 92 chr5 129682073 129682261 -73403271 - L1MC4a LINE L1 -1083 5063 4877 2342 90 13 3 chr5 129682261 129682571 -73402961 + AluSp SINE Alu 1 313 0 302 280 81 92 chr5 129682571 129682643 -73402889 - L1MC4a LINE L1 -1269 4877 4806 2246 106 3 0 chr5 129682675 129682978 -73402554 - AluSg SINE Alu -6 304 1 549 140 184 26 chr5 129683014 129683128 -73402404 + FLAM_C SINE Alu 2 133 0 238 240 91 41 chr5 129683344 129683465 -73402067 - L1 LINE L1 -1796 4350 4224 305 235 92 20 chr5 129683553 129683651 -73401881 + MIR SINE MIR 158 262 0 266 222 49 25 chr5 129685757 129685838 -73399694 + MLT1D LTR MaLR 3 85 -420 770 199 46 7 chr5 129686041 129686192 -73399340 + MLT1C LTR MaLR 311 467 0 2251 83 7 0 chr5 129686397 129686687 -73398845 + AluSg1 SINE Alu 2 293 -16 620 217 0 8 chr5 129687413 129687533 -73397999 - FLAM_A SINE Alu -18 124 6 2118 123 17 3 chr5 129687818 129688120 -73397412 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 129688564 129688585 -73396947 + AT_rich Low_complexity Low_complexity 1 21 0 2307 100 7 3 chr5 129689183 129689493 -73396039 + AluSp SINE Alu 1 311 -2 942 139 96 72 chr5 129689539 129689747 -73395785 - AluJo SINE Alu -14 298 86 25 31 0 0 chr5 129690424 129690456 -73395076 + AT_rich Low_complexity Low_complexity 1 32 0 219 102 17 34 chr5 129690470 129690529 -73395003 + (TA)n Simple_repeat Simple_repeat 1 58 0 800 176 94 18 chr5 129690771 129690941 -73394591 + MER20 DNA MER1_type 36 218 -1 300 259 112 35 chr5 129690942 129691058 -73394474 + L2 LINE L2 3189 3313 0 221 274 0 0 chr5 129691072 129691123 -73394409 + L2 LINE L2 3213 3263 -9 718 69 29 10 chr5 129694454 129694556 -73390976 + L1PA11 LINE L1 6071 6174 0 180 0 0 0 chr5 129694624 129694644 -73390888 + (TG)n Simple_repeat Simple_repeat 2 21 0 450 0 0 0 chr5 129694696 129694746 -73390786 + (TG)n Simple_repeat Simple_repeat 2 51 0 2208 89 0 14 chr5 129694766 129695059 -73390473 + AluSc SINE Alu 1 289 -20 25 31 0 0 chr5 129696273 129696305 -73389227 + AT_rich Low_complexity Low_complexity 1 32 0 2427 93 0 0 chr5 129696636 129696936 -73388596 + AluSx SINE Alu 1 300 -12 1696 168 3 30 chr5 129697145 129697443 -73388089 - AluJb SINE Alu -22 290 1 882 212 39 0 chr5 129697443 129697622 -73387910 + MER5A DNA MER1_type 4 189 0 1955 85 54 0 chr5 129697721 129697979 -73387553 + AluY SINE Alu 27 298 -13 2186 91 3 17 chr5 129698528 129698826 -73386706 - AluSc SINE Alu -15 294 1 227 245 61 0 chr5 129699103 129699152 -73386380 + L2 LINE L2 3217 3268 -4 2071 122 7 7 chr5 129699250 129699546 -73385986 - AluSx SINE Alu -16 296 1 1644 99 0 14 chr5 129699718 129699940 -73385592 - AluSx SINE Alu -93 219 1 2137 107 0 30 chr5 129700009 129700309 -73385223 - AluSx SINE Alu -21 291 1 1774 135 73 21 chr5 129701261 129701601 -73383931 + MER46B DNA MER2_type 2 234 -2 2105 80 0 0 chr5 129702288 129702552 -73382980 - AluY SINE Alu -47 264 1 378 256 110 61 chr5 129702634 129702798 -73382734 - MIR SINE MIR -87 175 4 2305 112 3 3 chr5 129703299 129703611 -73381921 - AluSq SINE Alu 0 313 2 422 304 69 78 chr5 129703986 129704538 -73380994 + L1M4 LINE L1 2664 3210 -2936 1400 93 10 10 chr5 129704612 129704806 -73380726 + AluSx SINE Alu 1 194 -118 1792 133 76 116 chr5 129704806 129705281 -73380251 + LTR2B LTR ERV1 6 461 -29 5226 70 11 24 chr5 129705283 129706123 -73379409 + Harlequin LTR ERV1 1784 2612 -4284 289 221 35 0 chr5 129706224 129706310 -73379222 - L1ME LINE L1 -313 5857 5769 234 0 0 0 chr5 129706311 129706337 -73379195 + (CA)n Simple_repeat Simple_repeat 2 27 0 2100 112 3 0 chr5 129706535 129706829 -73378703 + AluSq SINE Alu 2 296 -17 2185 273 40 36 chr5 129706921 129707209 -73378323 - L2 LINE L2 -872 2442 2157 2529 43 0 3 chr5 129707209 129707512 -73378020 + AluY SINE Alu 1 302 -9 2185 273 40 36 chr5 129707512 129707669 -73377863 - L2 LINE L2 -1157 2157 2002 2504 58 0 0 chr5 129707669 129707964 -73377568 + AluY SINE Alu 1 295 -16 2185 273 40 36 chr5 129707964 129708350 -73377182 - L2 LINE L2 -1312 2002 1607 216 97 0 0 chr5 129708899 129708930 -73376602 + (T)n Simple_repeat Simple_repeat 1 31 0 2420 85 13 0 chr5 129709153 129709459 -73376073 + AluSg SINE Alu 1 310 0 2406 80 0 0 chr5 129709548 129709850 -73375682 + AluY SINE Alu 1 302 -9 203 333 167 40 chr5 129710117 129710243 -73375289 - MIR3 SINE MIR -66 142 1 2368 36 40 20 chr5 129710438 129710739 -73374793 + AluY SINE Alu 1 307 -4 250 382 20 0 chr5 129710739 129710841 -73374691 - L2 LINE L2 -20 3293 3190 2081 141 0 0 chr5 129711174 129711471 -73374061 + AluSx SINE Alu 1 297 -15 466 302 37 81 chr5 129712161 129712678 -73372854 - L1MC4a LINE L1 0 6121 5625 2265 113 0 0 chr5 129712869 129713170 -73372362 - AluSg SINE Alu -9 301 1 380 384 113 4 chr5 129713242 129713508 -73372024 + L2 LINE L2 2683 2977 -337 257 308 187 44 chr5 129713576 129713758 -73371774 + L2 LINE L2 3101 3308 -5 846 242 14 28 chr5 129713789 129714000 -73371532 - MIR SINE MIR -42 220 13 2323 115 0 0 chr5 129714064 129714368 -73371164 + AluSx SINE Alu 1 304 -8 21 71 0 0 chr5 129714545 129714587 -73370945 + AT_rich Low_complexity Low_complexity 1 42 0 335 254 39 39 chr5 129714624 129714754 -73370778 - L1MC4a LINE L1 -539 5582 5453 230 260 78 0 chr5 129714920 129714997 -73370535 - MIR SINE MIR -99 163 81 303 288 54 27 chr5 129716183 129716294 -73369238 + MIR SINE MIR 127 240 -22 2169 134 0 6 chr5 129716365 129716678 -73368854 + AluSq SINE Alu 1 311 -2 1867 166 0 0 chr5 129718007 129718296 -73367236 - Charlie3 DNA MER1_type -2418 292 4 1553 123 50 4 chr5 129718298 129718558 -73366974 - MER7A DNA MER2_type -75 271 2 2620 52 0 0 chr5 129718676 129718984 -73366548 - AluY SINE Alu -3 308 1 2365 97 3 7 chr5 129719540 129719849 -73365683 - AluSp SINE Alu -5 308 1 22 35 0 0 chr5 129721527 129721556 -73363976 + AT_rich Low_complexity Low_complexity 1 29 0 206 217 0 96 chr5 129721990 129722073 -73363459 + MIR SINE MIR 146 220 -42 234 0 0 0 chr5 129723304 129723330 -73362202 + (A)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr5 129727317 129727339 -73358193 + AT_rich Low_complexity Low_complexity 1 22 0 420 297 111 78 chr5 129727590 129728318 -73357214 - L2 LINE L2 0 3313 2557 359 248 98 73 chr5 129728355 129728601 -73356931 - L1MC4a LINE L1 -795 5351 5100 412 332 23 9 chr5 129728905 129729119 -73356413 - L1MC4a LINE L1 -1487 4659 4443 180 0 0 0 chr5 129730577 129730597 -73354935 + (TTA)n Simple_repeat Simple_repeat 1 20 0 269 237 140 35 chr5 129731095 129731209 -73354323 + MLT1J LTR MaLR 9 134 -377 227 320 0 0 chr5 129731719 129731797 -73353735 - MIR SINE MIR -29 233 156 5529 200 183 24 chr5 129731801 129733254 -73352278 + MER52A LTR ERV1 1 1755 0 200 235 20 0 chr5 129733288 129733339 -73352193 - MIR SINE MIR -140 122 71 882 240 25 9 chr5 129734798 129735026 -73350506 + MIR SINE MIR 23 255 -7 204 271 168 26 chr5 129736160 129736315 -73349217 - L2 LINE L2 -230 3042 2866 1559 126 95 0 chr5 129737453 129737738 -73347794 - MER46B DNA MER2_type 0 236 50 295 311 131 14 chr5 129737845 129737989 -73347543 - MIR3 SINE MIR -37 171 13 252 250 15 0 chr5 129738586 129738654 -73346878 + MLT1K LTR MaLR 518 586 -2 390 291 49 60 chr5 129739003 129739217 -73346315 + MIR SINE MIR 50 259 -3 212 0 36 0 chr5 129739443 129739471 -73346061 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 481 301 135 10 chr5 129740351 129740544 -73344988 - MIR SINE MIR -6 256 40 218 264 110 55 chr5 129741732 129741823 -73343709 - L2 LINE L2 -8 3264 3169 790 173 76 137 chr5 129742560 129742890 -73342642 - MLT1F LTR MaLR -247 295 1 418 100 33 0 chr5 129743128 129743219 -73342313 + Alu SINE Alu 222 314 0 1788 172 3 31 chr5 129743847 129744166 -73341366 - AluJb SINE Alu -2 310 1 436 183 51 0 chr5 129744277 129744414 -73341118 - MER69 DNA AcHobo -53 2473 2330 1731 272 56 8 chr5 129744423 129744945 -73340587 - MER69 DNA AcHobo -679 547 1 2403 106 3 0 chr5 129747312 129747624 -73337908 - AluSp SINE Alu 0 313 1 522 293 127 15 chr5 129748366 129748659 -73336873 + L2 LINE L2 2941 3267 -5 1618 129 96 18 chr5 129748727 129748999 -73336533 - AluSx SINE Alu -19 293 1 238 37 0 0 chr5 129749502 129749529 -73336003 + L1MA1 LINE L1 6177 6203 -99 7354 56 45 0 chr5 129749529 129749868 -73335664 - L1PA7 LINE L1 0 6154 5832 2341 98 0 0 chr5 129749868 129750165 -73335367 - AluSg SINE Alu -13 297 1 7354 56 45 0 chr5 129750165 129751058 -73334474 - L1PA7 LINE L1 -322 5832 4916 332 309 42 18 chr5 129751085 129751253 -73334279 + L2 LINE L2 2712 2883 -431 252 374 50 33 chr5 129751748 129752112 -73333420 - L2 LINE L2 -467 2847 2478 710 296 118 39 chr5 129752147 129752631 -73332901 + L3 LINE CR1 1028 1549 -28 339 330 70 0 chr5 129753288 129753403 -73332129 - MIR SINE MIR -128 134 12 599 241 47 0 chr5 129753578 129753748 -73331784 + Charlie5 DNA MER1_type 2408 2585 -27 904 226 11 5 chr5 129755713 129755899 -73329633 - MIR SINE MIR -1 261 75 2246 98 23 0 chr5 129756847 129757152 -73328380 - AluSp SINE Alu -1 312 1 1269 226 8 28 chr5 129757245 129757577 -73327955 + MER93b LTR ERV1 61 373 0 311 296 63 43 chr5 129758729 129759192 -73326340 + L1M4 LINE L1 2147 2618 -3528 914 116 6 17 chr5 129759303 129759476 -73326056 + (TTCC)n Simple_repeat Simple_repeat 3 173 0 482 57 14 0 chr5 129759483 129759553 -73325979 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 267 79 0 0 chr5 129759718 129759756 -73325776 + (TATG)n Simple_repeat Simple_repeat 4 41 0 2262 113 0 0 chr5 129759885 129760187 -73325345 - AluSx SINE Alu -10 302 1 261 261 11 54 chr5 129760255 129760347 -73325185 - L1ME LINE L1 -471 5650 5563 369 223 108 15 chr5 129760936 129761066 -73324466 - MER103 DNA DNA -17 149 8 2002 102 0 11 chr5 129761101 129761376 -73324156 + AluSg1 SINE Alu 1 272 -37 21143 77 18 5 chr5 129761476 129764188 -73321344 + Harlequin LTR ERV1 2964 5710 -1186 682 135 0 27 chr5 129764187 129764298 -73321234 + Harlequin LTR ERV1 6784 6891 -5 * 2459 141 94 67 chr5 129764301 129764778 -73320754 + LTR2B LTR ERV1 1 490 0 779 105 18 18 chr5 129764778 129764892 -73320640 + AluSg/x SINE Alu 187 300 -12 546 200 14 14 chr5 129764892 129765037 -73320495 - MER53 DNA DNA -41 148 4 804 299 71 11 chr5 129765225 129765576 -73319956 + L1MC/D LINE L1 34 405 -5991 2003 170 0 0 chr5 129766026 129766338 -73319194 - AluSx SINE Alu 0 312 1 25 0 0 0 chr5 129766421 129766446 -73319086 + AT_rich Low_complexity Low_complexity 1 25 0 394 371 98 28 chr5 129766971 129767233 -73318299 + L1MC/D LINE L1 4826 5133 -1082 2193 114 0 13 chr5 129767233 129767549 -73317983 - AluSx SINE Alu 0 312 1 394 371 98 28 chr5 129767549 129767723 -73317809 + L1MC/D LINE L1 5133 5293 -922 548 29 14 0 chr5 129767732 129767802 -73317730 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 378 350 38 38 chr5 129767813 129768204 -73317328 + L1MC/D LINE L1 5333 5723 -2154 610 269 23 18 chr5 129768676 129768847 -73316685 + MER104 DNA Tc2 5 176 -4 312 286 0 0 chr5 129769275 129769359 -73316173 + MIR SINE MIR 57 140 -122 575 286 67 24 chr5 129769922 129770132 -73315400 - L3b LINE CR1 -71 1512 1294 191 413 98 0 chr5 129770532 129770675 -73314857 + L2 LINE L2 3116 3272 0 288 137 0 0 chr5 129772467 129772518 -73313014 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 216 295 0 42 chr5 129772869 129772964 -73312568 + MIR SINE MIR 151 241 -21 180 283 26 80 chr5 129773002 129773115 -73312417 - MER5A DNA MER1_type -77 112 6 25 31 0 0 chr5 129773231 129773263 -73312269 + AT_rich Low_complexity Low_complexity 1 32 0 690 319 43 22 chr5 129774471 129774906 -73310626 - MLT1K LTR MaLR -109 479 1 21 57 0 0 chr5 129775161 129775196 -73310336 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 129775735 129775755 -73309777 + (CAA)n Simple_repeat Simple_repeat 2 21 0 232 293 40 0 chr5 129775944 129776019 -73309513 + L1ME LINE L1 5527 5604 -517 1391 280 68 41 chr5 129776234 129776867 -73308665 + L1MC4a LINE L1 5254 5903 -1905 25 31 0 0 chr5 129777019 129777051 -73308481 + AT_rich Low_complexity Low_complexity 1 32 0 509 295 98 70 chr5 129778531 129779032 -73306500 + MLT1K LTR MaLR 70 584 -4 393 247 34 75 chr5 129779082 129779283 -73306249 - MIR SINE MIR -46 216 23 23 0 0 0 chr5 129779932 129779955 -73305577 + AT_rich Low_complexity Low_complexity 1 23 0 342 387 27 0 chr5 129780638 129780788 -73304744 - MIR SINE MIR -59 203 50 232 254 30 60 chr5 129781002 129781069 -73304463 - L2 LINE L2 -1 3271 3207 2107 109 3 7 chr5 129781497 129781922 -73303610 - AluSx SINE Alu 0 424 1 283 335 25 32 chr5 129782076 129782234 -73303298 - MIR SINE MIR -67 195 39 1118 289 36 21 chr5 129782324 129782743 -73302789 + MER113 DNA MER1_type? 54 478 -43 31 26 0 0 chr5 129783377 129783415 -73302117 + AT_rich Low_complexity Low_complexity 1 38 0 406 323 16 15 chr5 129785189 129785318 -73300214 + MIR SINE MIR 15 144 -64 378 337 0 6 chr5 129786811 129786974 -73298558 + (TG)n Simple_repeat Simple_repeat 2 163 0 603 240 58 18 chr5 129787521 129787692 -73297840 + MIR SINE MIR 47 224 -38 664 263 132 0 chr5 129788097 129788310 -73297222 + MIR SINE MIR 12 252 -10 498 310 155 9 chr5 129788747 129788960 -73296572 + MIR SINE MIR 4 247 -15 1110 193 0 0 chr5 129789178 129789354 -73296178 - MER45A DNA AcHobo 0 178 3 2411 76 0 0 chr5 129790862 129791153 -73294379 - AluY SINE Alu -20 291 1 1144 251 85 74 chr5 129791749 129792288 -73293244 - L1MC/D LINE L1 -2000 5808 5264 710 299 26 25 chr5 129792579 129792964 -73292568 - LTR16A LTR ERVL 0 450 16 856 262 65 11 chr5 129793733 129794012 -73291520 + LTR16C LTR ERVL 170 463 -28 365 278 24 40 chr5 129795267 129795393 -73290139 - MIR SINE MIR -30 232 109 1189 257 92 32 chr5 129795765 129796169 -73289363 - LTR16C LTR ERVL 0 491 64 2113 108 0 33 chr5 129796473 129796780 -73288752 + AluY SINE Alu 1 297 -14 205 300 0 0 chr5 129797753 129797803 -73287729 - L2 LINE L2 -50 3263 3214 715 307 92 50 chr5 129797831 129798240 -73287292 + MLT1H LTR MaLR 39 472 -77 2289 116 0 3 chr5 129798240 129798551 -73286981 + AluSp SINE Alu 1 310 -3 715 307 92 50 chr5 129798551 129798617 -73286915 + MLT1H LTR MaLR 472 534 -15 212 59 29 0 chr5 129798640 129798674 -73286858 + (TA)n Simple_repeat Simple_repeat 2 36 0 326 326 28 33 chr5 129798762 129798922 -73286610 - L2 LINE L2 -321 2992 2832 1975 155 39 55 chr5 129798922 129799303 -73286229 + THE1C LTR MaLR 1 375 0 326 326 28 33 chr5 129799303 129799323 -73286209 - L2 LINE L2 -481 2832 2813 906 144 30 153 chr5 129800666 129800902 -73284630 + MER3 DNA MER1_type 1 207 -2 284 306 133 0 chr5 129800974 129801072 -73284460 + L2 LINE L2 3203 3313 0 448 318 41 6 chr5 129801435 129801605 -73283927 - MIR SINE MIR -23 239 64 181 299 58 35 chr5 129802371 129802458 -73283074 - MIR3 SINE MIR -30 178 90 515 345 6 0 chr5 129802878 129803052 -73282480 - MIR SINE MIR -5 257 83 506 279 59 63 chr5 129804023 129804362 -73281170 + L1ME4a LINE L1 5574 5875 -246 2386 65 3 43 chr5 129804609 129804933 -73280599 - AluY SINE Alu 0 311 1 2361 86 16 25 chr5 129804965 129805280 -73280252 + AluSq SINE Alu 2 313 0 369 0 0 0 chr5 129805702 129805743 -73279789 + (CA)n Simple_repeat Simple_repeat 2 42 0 342 80 0 0 chr5 129806074 129806124 -73279408 + (CAT)n Simple_repeat Simple_repeat 2 51 0 520 234 23 8 chr5 129806138 129806266 -73279266 - MIR SINE MIR -17 245 116 597 365 33 19 chr5 129806345 129806709 -73278823 + L3 LINE CR1 781 1149 -428 609 297 55 5 chr5 129806728 129806930 -73278602 - MIR SINE MIR -22 240 29 196 315 235 50 chr5 129807322 129807560 -73277972 + L3 LINE CR1 1277 1558 -19 252 200 53 53 chr5 129808292 129808367 -73277165 - Charlie8 DNA MER1_type -1 2416 2342 21 82 0 0 chr5 129808773 129808822 -73276710 + AT_rich Low_complexity Low_complexity 1 49 0 2211 199 18 7 chr5 129808842 129808967 -73276565 - L1MC3 LINE L1 0 7785 7663 1128 198 88 0 chr5 129808967 129809184 -73276348 - MER46A DNA MER2_type 0 236 1 2211 199 18 7 chr5 129809184 129809499 -73276033 - L1MC3 LINE L1 -122 7663 7340 1941 199 84 16 chr5 129809501 129809929 -73275603 - LTR32 LTR ERVL 0 471 15 2632 153 83 42 chr5 129809929 129810125 -73275407 - L1MC3 LINE L1 -443 7342 7156 2094 122 60 46 chr5 129810125 129810495 -73275037 + THE1C LTR MaLR 1 375 0 10195 124 36 42 chr5 129810495 129811257 -73274275 + THE1C-int LTR MaLR 1 766 -814 2360 85 3 3 chr5 129811257 129811563 -73273969 + AluSc SINE Alu 1 306 -3 10195 124 36 42 chr5 129811563 129812390 -73273142 + THE1C-int LTR MaLR 766 1580 0 2074 117 53 56 chr5 129812390 129812720 -73272812 + THE1C LTR MaLR 1 331 -44 1737 157 59 7 chr5 129812720 129813006 -73272526 - AluSg SINE Alu -9 301 1 2074 117 53 56 chr5 129813006 129813051 -73272481 + THE1C LTR MaLR 331 375 0 2632 153 83 42 chr5 129813051 129813403 -73272129 - L1MC3 LINE L1 -628 7157 6769 283 329 0 0 chr5 129813455 129813531 -73272001 - Charlie8 DNA MER1_type -2336 81 6 438 309 55 6 chr5 129813983 129814164 -73271368 - Charlie8 DNA MER1_type -2152 265 76 2308 109 3 0 chr5 129814638 129814949 -73270583 + AluSx SINE Alu 1 312 0 744 288 28 28 chr5 129816460 129816572 -73268960 - MIR SINE MIR 0 262 151 1547 148 80 107 chr5 129816572 129817032 -73268500 + LTR7 LTR ERV1 1 448 -2 744 288 28 28 chr5 129817032 129817169 -73268363 - MIR SINE MIR -110 152 13 228 196 78 0 chr5 129817949 129818000 -73267532 + L1ME LINE L1 5747 5801 -363 23 0 0 0 chr5 129818322 129818345 -73267187 + AT_rich Low_complexity Low_complexity 1 23 0 2353 83 3 13 chr5 129818686 129819000 -73266532 - AluSx SINE Alu -1 311 1 778 219 80 52 chr5 129819640 129819891 -73265641 + ORSL DNA AcHobo 18 275 0 180 0 0 0 chr5 129820024 129820044 -73265488 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 213 322 79 57 chr5 129820155 129820346 -73265186 - MIR SINE MIR -71 191 3 261 213 0 0 chr5 129820736 129820783 -73264749 + L2 LINE L2 3224 3270 -2 1275 232 38 85 chr5 129820808 129821356 -73264176 - MER39 LTR ERV1 0 707 1 21 0 0 0 chr5 129821420 129821441 -73264091 + AT_rich Low_complexity Low_complexity 1 21 0 220 356 22 22 chr5 129821513 129821603 -73263929 + MIR SINE MIR 74 163 -99 2224 37 7 7 chr5 129821996 129822265 -73263267 + L1PA5 LINE L1 5886 6154 0 2041 90 0 117 chr5 129822440 129822609 -73262923 + AluSg SINE Alu 1 114 -196 2479 84 3 0 chr5 129822609 129822917 -73262615 + AluSp SINE Alu 1 309 -4 2041 90 0 117 chr5 129822917 129823080 -73262452 + AluSg SINE Alu 114 294 -16 2081 119 14 0 chr5 129824786 129825079 -73260453 - AluY SINE Alu -14 297 1 1875 153 35 0 chr5 129825162 129825450 -73260082 + AluJb SINE Alu 1 298 -14 2356 85 0 3 chr5 129825733 129826027 -73259505 + AluSg SINE Alu 1 293 -17 382 296 67 21 chr5 129830044 129830374 -73255158 + L1ME4a LINE L1 5715 5931 -190 311 291 71 31 chr5 129830822 129830949 -73254583 + MIR3 SINE MIR 62 193 -15 1978 175 71 32 chr5 129831031 129831470 -73254062 - LTR2B LTR ERV1 -3 487 32 3215 151 126 30 chr5 129831795 129832437 -73253095 - MER39 LTR ERV1 -3 704 1 446 231 0 9 chr5 129832471 129832579 -73252953 - MER39 LTR ERV1 -19 688 582 1443 126 140 75 chr5 129832579 129832857 -73252675 + AluSx SINE Alu 1 296 -6 252 0 0 0 chr5 129834462 129834490 -73251042 + (T)n Simple_repeat Simple_repeat 1 28 0 2201 121 0 13 chr5 129835266 129835571 -73249961 - AluSx SINE Alu -11 301 1 1941 164 0 7 chr5 129835571 129835874 -73249658 - AluSx SINE Alu -9 303 2 2151 92 0 62 chr5 129835952 129836258 -73249274 + AluSg SINE Alu 3 289 -21 724 225 0 0 chr5 129836351 129836480 -73249052 + FLAM_C SINE Alu 2 130 -13 1201 199 31 112 chr5 129836480 129836595 -73248937 - MER34B LTR ERV1 -168 397 274 2303 104 0 0 chr5 129836595 129836894 -73248638 + AluSx SINE Alu 1 299 -13 1201 199 31 112 chr5 129836894 129836982 -73248550 - MER34B LTR ERV1 -291 274 180 2365 76 7 3 chr5 129836982 129837285 -73248247 - AluY SINE Alu -7 304 1 1201 199 31 112 chr5 129837285 129837501 -73248031 - MER34B LTR ERV1 -385 180 11 2909 86 0 30 chr5 129837502 129837875 -73247657 - THE1B LTR MaLR 0 364 3 544 123 0 0 chr5 129837907 129837980 -73247552 + AluS SINE Alu 1 73 -239 2105 132 0 0 chr5 129838074 129838369 -73247163 - AluSq SINE Alu -18 295 1 334 0 43 0 chr5 129838433 129838479 -73247053 + (TA)n Simple_repeat Simple_repeat 2 49 0 3709 49 2 0 chr5 129838484 129838931 -73246601 - L1PA5 LINE L1 -80 6074 5627 206 330 117 10 chr5 129838931 129839034 -73246498 - MIR SINE MIR -99 163 50 843 58 19 45 chr5 129839230 129839385 -73246147 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 2178 92 0 7 chr5 129839387 129839670 -73245862 - AluY SINE Alu -30 281 1 427 229 0 111 chr5 129839749 129839893 -73245639 - MIR SINE MIR -64 144 17 281 26 26 0 chr5 129840145 129840183 -73245349 + (TG)n Simple_repeat Simple_repeat 1 39 0 306 282 160 5 chr5 129840537 129840750 -73244782 - L1ME4a LINE L1 -2 6119 5874 185 318 45 0 chr5 129840811 129840877 -73244655 - MIR SINE MIR -84 178 110 376 315 41 30 chr5 129840884 129841081 -73244451 + L2 LINE L2 2157 2355 -959 555 313 63 44 chr5 129841115 129841168 -73244364 + L2 LINE L2 2615 2666 -606 2308 96 7 3 chr5 129841168 129841471 -73244061 - AluSq SINE Alu -9 304 1 555 313 63 44 chr5 129841471 129841872 -73243660 + L2 LINE L2 2666 3078 -194 422 153 0 14 chr5 129841894 129841966 -73243566 - LTR29 LTR ERV1 0 622 552 1346 117 10 0 chr5 129841987 129842192 -73243340 - MER39B LTR ERV1 -446 207 1 355 283 54 63 chr5 129842194 129842399 -73243133 + L2 LINE L2 3106 3308 -5 363 200 150 12 chr5 129842531 129842611 -73242921 + AluJ/FLAM SINE Alu 1 91 -211 180 0 0 0 chr5 129842621 129842641 -73242891 + (TAA)n Simple_repeat Simple_repeat 2 21 0 250 300 0 12 chr5 129842970 129843050 -73242482 - MIR3 SINE MIR -5 203 125 224 262 0 0 chr5 129843271 129843313 -73242219 + (CAG)n Simple_repeat Simple_repeat 3 44 0 259 265 73 79 chr5 129843421 129843587 -73241945 - MIR SINE MIR -59 149 22 243 125 0 0 chr5 129844240 129844280 -73241252 + (CA)n Simple_repeat Simple_repeat 2 41 0 278 304 22 22 chr5 129845116 129845251 -73240281 - L1M4 LINE L1 -1952 4194 4060 552 242 60 76 chr5 129845570 129845807 -73239725 + MIR SINE MIR 31 262 0 2375 75 20 0 chr5 129845930 129846225 -73239307 - AluY SINE Alu -9 302 2 21 0 0 0 chr5 129846608 129846629 -73238903 + AT_rich Low_complexity Low_complexity 1 21 0 441 246 74 11 chr5 129846997 129847172 -73238360 + MER113 DNA MER1_type? 32 217 -304 2536 61 0 16 chr5 129847309 129847622 -73237910 - AluY SINE Alu -3 308 1 505 238 124 16 chr5 129847681 129847866 -73237666 + L2 LINE L2 3086 3290 -23 2274 104 0 0 chr5 129848111 129848408 -73237124 - AluSc SINE Alu -12 297 1 2185 128 0 0 chr5 129848846 129849143 -73236389 - AluSx SINE Alu -11 301 5 2432 59 7 0 chr5 129849208 129849496 -73236036 + AluY SINE Alu 6 295 -16 22 0 0 0 chr5 129849871 129849893 -73235639 + AT_rich Low_complexity Low_complexity 1 22 0 971 139 60 0 chr5 129850224 129850390 -73235142 + FRAM SINE Alu 1 172 -4 2272 117 3 0 chr5 129850704 129851011 -73234521 - AluSg SINE Alu -2 308 1 600 335 15 10 chr5 129851611 129851817 -73233715 - MIR SINE MIR -25 237 31 2102 102 25 0 chr5 129851957 129852240 -73233292 - AluSx SINE Alu -22 290 1 4447 156 96 41 chr5 129852285 129853258 -73232274 - L1MC2 LINE L1 -12 6332 5291 2411 86 0 10 chr5 129853258 129853571 -73231961 - AluSg SINE Alu 0 310 1 4447 156 96 41 chr5 129853571 129853660 -73231872 - L1MC2 LINE L1 -1053 5291 5208 364 297 61 0 chr5 129853885 129854033 -73231499 + MER103 DNA DNA 10 166 0 560 268 60 51 chr5 129854391 129854626 -73230906 - L2 LINE L2 0 3313 3077 974 227 14 0 chr5 129854626 129854842 -73230690 - MER58A DNA MER1_type 0 224 6 204 298 46 99 chr5 129854862 129854923 -73230609 - L2 LINE L2 -222 3091 3039 2508 66 3 0 chr5 129854923 129855224 -73230308 + AluSp SINE Alu 1 302 -11 204 298 46 99 chr5 129855224 129855293 -73230239 - L2 LINE L2 -274 3039 2968 556 124 87 43 chr5 129855340 129855530 -73230002 - L1M4 LINE L1 -748 5398 5208 2444 73 13 0 chr5 129855679 129855981 -73229551 - AluY SINE Alu -5 306 1 233 122 0 20 chr5 129856017 129856066 -73229466 + MADE1 DNA Mariner 31 78 -2 1169 329 92 16 chr5 129856067 129856712 -73228820 - L2 LINE L2 -364 2950 2257 2135 132 3 0 chr5 129856735 129857045 -73228487 + AluSq SINE Alu 1 311 -2 266 282 144 52 chr5 129857106 129857280 -73228252 + L2 LINE L2 3116 3305 -8 374 321 172 0 chr5 129857647 129857781 -73227751 - MIR3 SINE MIR -22 186 30 200 176 0 0 chr5 129858052 129858086 -73227446 + (TG)n Simple_repeat Simple_repeat 2 35 0 2178 92 7 0 chr5 129858105 129858412 -73227120 - AluSp SINE Alu 0 309 1 23 33 0 0 chr5 129858418 129858448 -73227084 + AT_rich Low_complexity Low_complexity 1 30 0 1812 134 54 0 chr5 129858563 129858839 -73226693 - AluSx SINE Alu -21 291 1 729 246 30 0 chr5 129858927 129859094 -73226438 - FAM SINE Alu -2 173 2 2028 190 40 44 chr5 129859846 129860415 -73225117 + L1ME2 LINE L1 5595 6161 -3 1913 170 0 0 chr5 129860785 129861074 -73224458 - AluJo SINE Alu -23 289 1 2368 87 0 10 chr5 129861232 129861544 -73223988 - AluY SINE Alu 0 311 3 317 346 59 7 chr5 129861574 129861710 -73223822 + L2 LINE L2 3129 3271 -1 2351 72 24 0 chr5 129862525 129862818 -73222714 - AluSp SINE Alu -12 301 2 1907 158 20 0 chr5 129863646 129863949 -73221583 - AluSg SINE Alu 0 310 2 22 0 0 0 chr5 129864106 129864128 -73221404 + AT_rich Low_complexity Low_complexity 1 22 0 196 330 80 30 chr5 129864178 129864278 -73221254 - L2 LINE L2 -4 3309 3205 218 244 0 0 chr5 129864349 129864394 -73221138 - MIR SINE MIR -72 190 146 396 222 301 3 chr5 129864478 129864658 -73220874 - MIR SINE MIR 0 262 20 185 368 42 11 chr5 129865081 129865176 -73220356 + MIR SINE MIR 44 141 -67 28 71 0 0 chr5 129865263 129865319 -73220213 + AT_rich Low_complexity Low_complexity 1 56 0 1321 164 22 53 chr5 129866681 129866999 -73218533 - L1MB7 LINE L1 0 6184 5877 2369 115 25 48 chr5 129867012 129867683 -73217849 - L1PA4 LINE L1 -1 6154 5531 297 0 0 0 chr5 129869520 129869553 -73215979 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr5 129871230 129871251 -73214281 + AT_rich Low_complexity Low_complexity 1 21 0 363 169 39 0 chr5 129871722 129871799 -73213733 + MER103 DNA DNA 13 92 -74 2348 93 3 0 chr5 129871806 129872108 -73213424 + AluSp SINE Alu 2 304 -9 1814 145 43 13 chr5 129872174 129872477 -73213055 - AluJo SINE Alu 0 312 1 275 259 45 9 chr5 129872562 129872674 -73212858 + MER117 DNA MER1_type 1 116 -81 356 0 0 0 chr5 129873240 129873283 -73212249 + 5S rRNA rRNA 1 43 -78 1792 147 3 48 chr5 129873484 129873755 -73211777 + AluJo SINE Alu 12 269 -43 216 97 0 0 chr5 129873755 129873786 -73211746 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1792 147 3 48 chr5 129873786 129873827 -73211705 + AluJo SINE Alu 269 310 -2 2351 74 17 0 chr5 129874517 129874814 -73210718 + AluY SINE Alu 1 302 -9 1737 168 10 14 chr5 129874851 129875142 -73210390 + AluJo SINE Alu 1 290 -22 644 147 0 35 chr5 129876160 129876276 -73209256 + MSTA LTR MaLR 290 401 -27 8252 50 9 0 chr5 129876291 129877248 -73208284 + LTR5 LTR ERVK 1 966 -3 1069 96 7 0 chr5 129877256 129877402 -73208130 - AluSq SINE Alu -1 312 166 2463 89 94 5 chr5 129877402 129877807 -73207725 + LTR7 LTR ERV1 1 441 -9 1045 151 6 22 chr5 129877811 129877990 -73207542 - AluSq SINE Alu -137 176 1 264 105 0 0 chr5 129877991 129878029 -73207503 + MSTA LTR MaLR 389 426 0 1295 219 57 18 chr5 129879478 129879879 -73205653 - LTR37A LTR ERV1 0 426 10 203 250 23 0 chr5 129879890 129879934 -73205598 - MIR SINE MIR -55 153 109 226 373 18 18 chr5 129880612 129880722 -73204810 - MIR SINE MIR -152 110 1 22 0 0 0 chr5 129881212 129881234 -73204298 + AT_rich Low_complexity Low_complexity 1 22 0 2339 99 3 0 chr5 129881247 129881550 -73203982 + AluSx SINE Alu 1 304 -8 430 242 20 160 chr5 129881708 129882001 -73203531 - MLT1K LTR MaLR -12 576 325 299 295 54 18 chr5 129882098 129882210 -73203322 - MLT1K LTR MaLR -438 150 35 1655 197 0 3 chr5 129882336 129882625 -73202907 + AluJo SINE Alu 3 290 -22 21 0 0 0 chr5 129882737 129882758 -73202774 + AT_rich Low_complexity Low_complexity 1 21 0 2163 131 0 0 chr5 129882764 129883062 -73202470 - AluSx SINE Alu -14 298 1 194 130 109 22 chr5 129883277 129883323 -73202209 - L2 LINE L2 0 3313 3264 284 228 118 16 chr5 129883399 129883526 -73202006 + L1ME4a LINE L1 5331 5470 -2338 417 360 0 12 chr5 129883622 129883783 -73201749 + L1ME4a LINE L1 5667 5825 -296 30 0 0 0 chr5 129884154 129884184 -73201348 + AT_rich Low_complexity Low_complexity 1 30 0 773 172 59 54 chr5 129884238 129884442 -73201090 - MER3 DNA MER1_type -4 205 1 253 327 44 0 chr5 129885298 129885411 -73200121 - LTR33A LTR ERVL -349 174 57 242 284 45 34 chr5 129885652 129885740 -73199792 + MER5A DNA MER1_type 18 106 -83 21 36 0 0 chr5 129886237 129886265 -73199267 + AT_rich Low_complexity Low_complexity 1 28 0 2253 117 0 0 chr5 129886902 129887210 -73198322 + AluSx SINE Alu 1 308 -4 2112 107 4 4 chr5 129887253 129887577 -73197955 - AluSg SINE Alu 0 324 1 199 299 52 62 chr5 129888362 129888459 -73197073 - MER5A DNA MER1_type -2 187 92 * 245 186 0 0 chr5 129888432 129888475 -73197057 + MER5A DNA MER1_type 119 161 -28 2448 77 0 3 chr5 129888657 129888967 -73196565 - AluY SINE Alu -2 309 1 429 20 0 0 chr5 129889442 129889492 -73196040 + (TAA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 129889518 129889539 -73195993 + AT_rich Low_complexity Low_complexity 1 21 0 188 340 0 0 chr5 129889539 129889589 -73195943 + L2 LINE L2 3214 3263 -9 978 141 7 0 chr5 129889643 129889785 -73195747 - AluJb SINE Alu -165 147 5 271 278 93 25 chr5 129889881 129890030 -73195502 - MIR SINE MIR -3 205 42 670 164 69 50 chr5 129891011 129891121 -73194411 + MER5B DNA MER1_type 2 117 -61 2276 86 31 0 chr5 129891121 129891412 -73194120 - AluSc SINE Alu -9 300 1 670 164 69 50 chr5 129891412 129891460 -73194072 + MER5B DNA MER1_type 117 163 -15 294 309 59 27 chr5 129891651 129891801 -73193731 - MIR SINE MIR -66 142 39 308 308 0 33 chr5 129891865 129891956 -73193576 - L2 LINE L2 -181 3091 3004 275 310 126 0 chr5 129892133 129892220 -73193312 + MER5B DNA MER1_type 17 114 -64 1337 198 138 3 chr5 129892596 129892915 -73192617 - MLT1A1 LTR MaLR 0 365 4 693 201 103 38 chr5 129892949 129893133 -73192399 - MER77 LTR ERV1 -4 601 406 1337 240 42 11 chr5 129893536 129893991 -73191541 + L1MD2 LINE L1 897 1365 -5044 * 2204 229 76 26 chr5 129893989 129894558 -73190974 + L1MD2 LINE L1 4967 5507 -1112 1732 160 36 0 chr5 129894558 129894864 -73190668 + AluJb SINE Alu 1 316 0 2204 229 76 26 chr5 129894864 129895456 -73190076 + L1MD2 LINE L1 5507 6199 -420 2219 123 6 22 chr5 129895456 129895774 -73189758 + AluSq SINE Alu 1 313 0 2204 229 76 26 chr5 129895774 129895829 -73189703 + L1MD2 LINE L1 6199 6250 -369 353 59 0 0 chr5 129895830 129895881 -73189651 - AluSq SINE Alu -113 190 140 1453 224 18 26 chr5 129896180 129896501 -73189031 + MER58B DNA MER1_type 6 325 -2095 2467 77 6 0 chr5 129896501 129896812 -73188720 + AluSp SINE Alu 1 313 0 1453 224 18 26 chr5 129896812 129896829 -73188703 + MER58B DNA MER1_type 325 341 0 24 0 0 0 chr5 129896854 129896878 -73188654 + AT_rich Low_complexity Low_complexity 1 24 0 1772 137 53 23 chr5 129896914 129897213 -73188319 + AluSx SINE Alu 1 308 -4 2483 32 7 10 chr5 129897356 129897666 -73187866 + AluY SINE Alu 1 309 -2 2265 83 23 13 chr5 129898591 129898893 -73186639 + AluSg SINE Alu 1 305 -5 231 333 63 24 chr5 129898894 129899020 -73186512 - MIR SINE MIR -62 146 16 2244 110 10 0 chr5 129899647 129899948 -73185584 - AluSg SINE Alu -6 304 1 1893 154 82 25 chr5 129900148 129900467 -73185065 - MER1B DNA MER1_type 0 337 1 420 194 5 203 chr5 129900646 129900863 -73184669 - L2 LINE L2 0 3313 3140 1343 308 89 23 chr5 129900872 129901358 -73184174 - L2 LINE L2 -720 2594 2059 2207 111 7 0 chr5 129901358 129901655 -73183877 + AluSx SINE Alu 1 299 -13 1343 308 89 23 chr5 129901655 129901772 -73183760 - L2 LINE L2 -1255 2059 1951 2308 109 0 0 chr5 129902026 129902328 -73183204 - AluSx SINE Alu -10 302 1 21 0 0 0 chr5 129902336 129902357 -73183175 + AT_rich Low_complexity Low_complexity 1 21 0 735 286 150 45 chr5 129902985 129903597 -73181935 + L2 LINE L2 2402 3133 -180 2438 93 3 0 chr5 129903597 129903907 -73181625 - AluSp SINE Alu -2 311 1 735 286 150 45 chr5 129903907 129904095 -73181437 + L2 LINE L2 3133 3300 -13 243 61 0 0 chr5 129904095 129904128 -73181404 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 265 310 85 16 chr5 129904198 129904327 -73181205 - LTR16C LTR ERVL -1 490 353 2419 92 3 0 chr5 129905115 129905421 -73180111 - AluSg SINE Alu -3 307 1 1587 187 31 90 chr5 129905867 129906232 -73179300 - LTR9 LTR ERV1 -73 539 264 2205 108 0 20 chr5 129906232 129906538 -73178994 + AluSq SINE Alu 1 300 -13 1587 187 31 90 chr5 129906538 129906788 -73178744 - LTR9 LTR ERV1 -348 264 1 22 0 0 0 chr5 129907235 129907257 -73178275 + AT_rich Low_complexity Low_complexity 1 22 0 382 186 0 14 chr5 129907318 129907388 -73178144 + L1MEc LINE L1 35 103 -6293 627 103 198 32 chr5 129907390 129907516 -73178016 + AluY SINE Alu 165 311 0 3477 238 80 42 chr5 129907543 129908254 -73177278 + L1MEc LINE L1 92 775 -5621 2548 74 0 0 chr5 129908254 129908564 -73176968 + AluSq SINE Alu 1 310 -3 3477 238 80 42 chr5 129908564 129908695 -73176837 + L1MEc LINE L1 775 900 -5496 2028 115 14 0 chr5 129908695 129909013 -73176519 + AluSg SINE Alu 1 322 0 3477 238 80 42 chr5 129909013 129909263 -73176269 + L1MEc LINE L1 900 1227 -5169 862 268 37 89 chr5 129909268 129909539 -73175993 + LTR41 LTR ERVL 214 461 -312 1728 181 3 19 chr5 129909539 129909853 -73175679 - AluJo SINE Alu -3 309 1 862 268 37 89 chr5 129909853 129909961 -73175571 + LTR41 LTR ERVL 461 573 -200 1357 186 36 36 chr5 129909999 129910305 -73175227 - AluSx SINE Alu -6 306 1 1020 262 82 8 chr5 129910372 129910739 -73174793 + L1M4 LINE L1 3619 4012 -2134 197 65 32 0 chr5 129910739 129910770 -73174762 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 535 259 80 61 chr5 129910870 129911132 -73174400 + L1M4 LINE L1 4019 4285 -1861 799 212 34 0 chr5 129911135 129911281 -73174251 + FRAM SINE Alu 1 151 -25 1914 208 27 0 chr5 129911284 129911697 -73173835 + L1M4 LINE L1 4263 4686 -1460 826 188 6 12 chr5 129911760 129911920 -73173612 + L1MA10 LINE L1 6175 6333 -1 245 311 0 0 chr5 129912378 129912452 -73173080 + CT-rich Low_complexity Low_complexity 2 75 0 3519 109 55 6 chr5 129912453 129912992 -73172540 + LTR49 LTR ERV1 1 555 -40 362 96 39 0 chr5 129913186 129913238 -73172294 + LTR48B LTR ERV1 1 54 -590 2587 144 31 27 chr5 129913239 129913458 -73172074 - MER41A LTR ERV1 -40 595 378 1767 155 0 20 chr5 129913458 129913754 -73171778 - AluSq SINE Alu -21 292 3 2587 144 31 27 chr5 129913754 129914125 -73171407 - MER41A LTR ERV1 -257 378 1 1669 247 87 15 chr5 129914125 129914656 -73170876 + LTR48B LTR ERV1 46 615 -29 22 0 0 0 chr5 129917361 129917383 -73168149 + AT_rich Low_complexity Low_complexity 1 22 0 893 163 0 14 chr5 129917391 129917532 -73168000 - FAM SINE Alu -27 158 20 2384 93 0 13 chr5 129917545 129917887 -73167645 - AluSc SINE Alu 0 338 1 335 212 12 0 chr5 129917912 129917997 -73167535 + CT-rich Low_complexity Low_complexity 4 89 0 471 141 0 0 chr5 129918025 129918103 -73167429 + (CA)n Simple_repeat Simple_repeat 2 79 0 187 363 67 34 chr5 129918794 129918973 -73166559 - L3b LINE CR1 -74 1509 1325 3462 155 49 5 chr5 129920711 129921278 -73164254 + LTR49 LTR ERV1 1 592 -3 230 229 83 0 chr5 129921477 129921525 -73164007 + L2 LINE L2 3262 3313 0 1856 121 57 14 chr5 129922253 129922534 -73162998 - AluSc SINE Alu -16 293 1 2895 50 3 8 chr5 129922606 129922968 -73162564 - LTR7 LTR ERV1 -2 448 89 1324 75 6 19 chr5 129922975 129923259 -73162273 - LTR7 LTR ERV1 -268 182 1 305 175 9 114 chr5 129923376 129923490 -73162042 - Charlie5 DNA MER1_type 0 2624 2523 244 150 50 46 chr5 129923495 129923511 -73162021 - L1MD1 LINE L1 -3 7763 7749 1146 157 5 0 chr5 129923511 129923702 -73161830 - L1MA5A LINE L1 -6 6291 6100 244 150 50 46 chr5 129923702 129923856 -73161676 - L1MD1 LINE L1 -17 7749 7597 1777 185 3 0 chr5 129923856 129924148 -73161384 - AluJb SINE Alu -15 297 5 244 150 50 46 chr5 129924148 129924357 -73161175 - L1MD1 LINE L1 -169 7597 6125 1755 183 10 86 chr5 129924359 129924463 -73161069 + MLT1A1 LTR MaLR 2 112 -253 2317 116 8 25 chr5 129924463 129924824 -73160708 - THE1A LTR MaLR 0 355 1 1755 183 10 86 chr5 129924824 129925113 -73160419 + MLT1A1 LTR MaLR 112 365 0 5920 209 98 60 chr5 129925113 129926672 -73158860 + MLT1A1-int LTR MaLR 1 1619 -116 1019 155 110 64 chr5 129926660 129926883 -73158649 - L1MC3 LINE L1 -519 7266 7028 * 2302 94 0 3 chr5 129926883 129927182 -73158350 + AluSg SINE Alu 2 299 -11 1019 155 110 64 chr5 129927182 129927222 -73158310 - L1MC3 LINE L1 -757 7028 6991 9463 194 48 40 chr5 129927222 129927733 -73157799 - Charlie5 DNA MER1_type -88 2536 2031 1262 206 70 11 chr5 129927733 129927862 -73157670 + AluJo SINE Alu 1 121 -191 303 28 0 0 chr5 129927862 129927898 -73157634 + (ATAAG)n Simple_repeat Simple_repeat 3 38 0 1262 206 70 11 chr5 129927898 129928040 -73157492 + AluJo SINE Alu 121 288 -24 9463 194 48 40 chr5 129928040 129928864 -73156668 - Charlie5 DNA MER1_type -593 2031 1215 2243 85 10 7 chr5 129928864 129929169 -73156363 - AluSg1 SINE Alu -3 306 1 9463 194 48 40 chr5 129929169 129930347 -73155185 - Charlie5 DNA MER1_type -1409 1215 1 2317 82 0 0 chr5 129930420 129930746 -73154786 - AluSq SINE Alu 0 326 1 1063 171 0 11 chr5 129931097 129931273 -73154259 - FRAM SINE Alu -2 174 1 425 302 144 15 chr5 129931278 129931480 -73154052 + L3 LINE CR1 1346 1573 -4 216 306 0 18 chr5 129932627 129932656 -73152876 + GA-rich Low_complexity Low_complexity 2 30 -80 2353 92 3 0 chr5 129932656 129932961 -73152571 + AluSp SINE Alu 1 306 -7 216 306 0 18 chr5 129932961 129933042 -73152490 + GA-rich Low_complexity Low_complexity 30 110 0 1629 162 9 94 chr5 129933773 129934101 -73151431 - AluJb SINE Alu -12 300 1 309 308 86 8 chr5 129934212 129934329 -73151203 - L2 LINE L2 -5 3308 3183 282 348 116 0 chr5 129934606 129934761 -73150771 + MIR SINE MIR 34 206 -56 22 35 0 0 chr5 129935089 129935118 -73150414 + AT_rich Low_complexity Low_complexity 1 29 0 391 297 16 31 chr5 129935189 129935317 -73150215 - MLT1J1 LTR MaLR 0 549 424 466 277 34 34 chr5 129935476 129935682 -73149850 - MLT1H LTR MaLR -343 206 1 355 279 88 49 chr5 129936728 129936954 -73148578 + L2 LINE L2 3038 3272 -41 604 55 0 22 chr5 129936995 129937086 -73148446 + (GAAA)n Simple_repeat Simple_repeat 1 89 0 222 37 0 0 chr5 129937328 129937355 -73148177 + (GA)n Simple_repeat Simple_repeat 2 28 0 326 286 136 34 chr5 129937474 129937680 -73147852 - MIR SINE MIR -14 248 22 363 275 48 153 chr5 129937866 129938063 -73147469 - L2 LINE L2 0 3313 3097 2155 131 0 13 chr5 129938063 129938376 -73147156 + AluSx SINE Alu 2 310 -2 363 275 48 153 chr5 129938376 129938701 -73146831 - L2 LINE L2 -216 3097 2846 413 274 17 34 chr5 129939118 129939235 -73146297 - MIR SINE MIR -123 139 25 2188 111 0 0 chr5 129940159 129940448 -73145084 + AluSx SINE Alu 3 291 -21 826 270 98 39 chr5 129940463 129940822 -73144710 - MLT1J1 LTR MaLR -52 394 15 500 226 55 111 chr5 129941089 129941213 -73144319 - MER5A DNA MER1_type 0 189 79 1359 165 130 35 chr5 129941213 129941498 -73144034 - AluJb SINE Alu 0 312 1 500 226 55 111 chr5 129941498 129941572 -73143960 - MER5A DNA MER1_type -110 79 2 278 264 76 83 chr5 129942606 129942750 -73142782 - MIR3 SINE MIR -47 161 19 252 0 0 0 chr5 129942895 129942923 -73142609 + (TG)n Simple_repeat Simple_repeat 2 29 0 1016 90 14 0 chr5 129943752 129943896 -73141636 - Tigger5 DNA MER2_type -116 2207 2062 246 139 0 0 chr5 129943894 129943930 -73141602 - Tigger5 DNA MER2_type -2261 62 27 * 2306 94 3 0 chr5 129943948 129944247 -73141285 - AluSx SINE Alu -12 300 1 589 288 11 47 chr5 129944498 129944689 -73140843 - MER5A DNA MER1_type -5 184 1 897 255 16 0 chr5 129945470 129945654 -73139878 + MER58A DNA MER1_type 12 198 -26 185 203 0 87 chr5 129945665 129945734 -73139798 - L2 LINE L2 -3161 153 91 1664 183 0 17 chr5 129946021 129946322 -73139210 - AluJo SINE Alu -16 296 1 271 242 156 23 chr5 129946346 129946474 -73139058 + MER103 DNA DNA 11 155 -11 2099 113 0 56 chr5 129946958 129947278 -73138254 + AluSx SINE Alu 5 306 -6 2246 118 0 0 chr5 129947396 129947692 -73137840 + AluSc SINE Alu 1 296 -13 473 253 180 39 chr5 129948652 129948830 -73136702 - MER63A DNA MER1_type -7 203 1 1179 173 33 0 chr5 129949055 129949269 -73136263 + AluJo SINE Alu 4 224 -88 814 173 38 128 chr5 129949269 129949474 -73136058 - L1MB7 LINE L1 -129 6055 5833 2358 84 0 3 chr5 129949474 129949770 -73135762 - AluSq SINE Alu -18 295 1 2118 136 0 3 chr5 129949771 129950073 -73135459 - AluSx SINE Alu -11 301 1 814 173 38 128 chr5 129950073 129950131 -73135401 - L1MB7 LINE L1 -350 5834 5814 194 0 0 37 chr5 129950156 129950183 -73135349 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 1893 156 29 3 chr5 129950188 129950496 -73135036 - L1MC1 LINE L1 -13 6320 6005 274 192 90 15 chr5 129950496 129950610 -73134922 - MER34 LTR ERV1 -1 729 437 986 204 44 63 chr5 129950826 129951144 -73134388 - MER39 LTR ERV1 -1 706 395 289 247 31 31 chr5 129951269 129951366 -73134166 - LTR48B LTR ERV1 -542 102 6 2691 162 12 2 chr5 129951372 129951865 -73133667 - L1MC1 LINE L1 -325 6008 5511 1047 202 70 30 chr5 129951926 129952332 -73133200 - L1MB7 LINE L1 -575 5599 5180 222 62 0 0 chr5 129952335 129952367 -73133165 + (TTG)n Simple_repeat Simple_repeat 2 33 0 485 167 0 24 chr5 129952385 129952469 -73133063 - FRAM SINE Alu -55 121 40 472 268 210 29 chr5 129952469 129952741 -73132791 - L2 LINE L2 -900 2414 2094 206 219 0 0 chr5 129953159 129953200 -73132332 + (TG)n Simple_repeat Simple_repeat 1 41 0 698 288 26 16 chr5 129954233 129954424 -73131108 + MIR SINE MIR 49 241 -21 1282 180 4 44 chr5 129954655 129954934 -73130598 - AluJo SINE Alu 0 311 43 181 318 30 0 chr5 129955048 129955114 -73130418 + MIR SINE MIR 85 152 -110 607 297 94 48 chr5 129956628 129956745 -73128787 + L1M4 LINE L1 3048 3158 -2988 2182 121 0 20 chr5 129956745 129957050 -73128482 + AluSp SINE Alu 1 299 -14 607 297 94 48 chr5 129957050 129957413 -73128119 + L1M4 LINE L1 3158 3550 -2596 244 241 0 0 chr5 129957463 129957521 -73128011 + T-rich Low_complexity Low_complexity 1 58 0 2397 75 0 3 chr5 129957897 129958204 -73127328 - AluY SINE Alu -5 306 1 308 263 73 17 chr5 129958542 129958721 -73126811 + L1M4 LINE L1 3876 4064 -2082 4843 203 67 36 chr5 129958980 129960224 -73125308 + Charlie1a DNA MER1_type 5 1298 -1463 2338 104 0 0 chr5 129960224 129960533 -73124999 + AluSq SINE Alu 1 309 -4 4843 203 67 36 chr5 129960533 129960695 -73124837 + Charlie1a DNA MER1_type 1298 1454 -1 13126 134 12 75 chr5 129960738 129962528 -73123004 + Tigger1 DNA MER2_type 1 1580 -838 2297 105 6 0 chr5 129962528 129962862 -73122670 - L1PA13 LINE L1 -4 6159 5824 13126 134 12 75 chr5 129962862 129963652 -73121880 + Tigger1 DNA MER2_type 1580 2418 0 1025 188 10 5 chr5 129964053 129964260 -73121272 - MER2 DNA MER2_type -134 211 4 233 290 0 0 chr5 129965643 129965705 -73119827 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 21 0 0 0 chr5 129965796 129965817 -73119715 + AT_rich Low_complexity Low_complexity 1 21 0 277 226 28 38 chr5 129966796 129966902 -73118630 - LTR48B LTR ERV1 -538 106 2 237 33 0 0 chr5 129968014 129968044 -73117488 + (CA)n Simple_repeat Simple_repeat 1 30 0 2407 89 0 3 chr5 129968271 129968584 -73116948 - AluSp SINE Alu -1 312 1 224 254 28 14 chr5 129968605 129968676 -73116856 + (TTCA)n Simple_repeat Simple_repeat 3 74 0 1799 206 105 42 chr5 129970183 129970677 -73114855 + MER68 LTR ERV1 1 525 -37 186 43 0 0 chr5 129971059 129971082 -73114450 + (A)n Simple_repeat Simple_repeat 1 23 0 516 275 50 16 chr5 129971296 129971478 -73114054 - MIR SINE MIR 0 262 75 568 295 36 40 chr5 129971693 129971944 -73113588 + MIR SINE MIR 13 262 0 1880 177 0 13 chr5 129972367 129972672 -73112860 - AluJo SINE Alu -11 301 1 1621 169 20 34 chr5 129973347 129973479 -73112053 + AluJb SINE Alu 1 133 -179 234 81 0 0 chr5 129973479 129973516 -73112016 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1621 169 20 34 chr5 129973516 129973678 -73111854 + AluJb SINE Alu 133 291 -21 238 176 27 40 chr5 129973769 129973843 -73111689 + MER113 DNA MER1_type? 1 73 -448 253 91 23 0 chr5 129973987 129974031 -73111501 + MER113 DNA MER1_type? 44 88 -433 1950 125 6 58 chr5 129975886 129976213 -73109319 - AluSx SINE Alu -2 310 1 676 248 74 63 chr5 129977037 129977388 -73108144 + MLT1C LTR MaLR 113 467 0 270 0 0 0 chr5 129977571 129977578 -73107954 + (TA)n Simple_repeat Simple_repeat 1 37 0 270 0 0 0 chr5 129977578 129977608 -73107924 + (TA)n Simple_repeat Simple_repeat 2 31 0 429 145 40 0 chr5 129977726 129977802 -73107730 + MADE1 DNA Mariner 1 79 -1 249 33 0 0 chr5 129978080 129978110 -73107422 + (T)n Simple_repeat Simple_repeat 1 30 0 24 0 0 0 chr5 129978955 129978979 -73106553 + AT_rich Low_complexity Low_complexity 1 24 0 495 233 70 8 chr5 129979110 129979239 -73106293 - L2 LINE L2 -6 3307 3171 656 177 48 0 chr5 129979968 129980092 -73105440 - MER45A DNA AcHobo 0 178 49 31 44 0 0 chr5 129980308 129980353 -73105179 + AT_rich Low_complexity Low_complexity 1 45 0 710 258 42 14 chr5 129980952 129981169 -73104363 + MER58A DNA MER1_type 1 223 -1 2387 206 89 55 chr5 129982243 129982985 -73102547 - L1MD2 LINE L1 -229 6130 5364 848 154 167 27 chr5 129982988 129983209 -73102323 + MER44D DNA MER2_type 1 522 -87 1467 226 18 9 chr5 129983213 129983550 -73101982 - MER2 DNA MER2_type 0 344 5 2258 239 101 6 chr5 129983660 129984371 -73101161 + L1ME1 LINE L1 5378 6156 -10 235 272 16 48 chr5 129984411 129984536 -73100996 - HAL1b LINE L1 -900 448 328 787 254 172 65 chr5 129987954 129988355 -73097177 - L3 LINE CR1 -7 1570 1127 376 297 85 8 chr5 129988413 129988531 -73097001 - MER5B DNA MER1_type -1 177 51 752 291 65 4 chr5 129989867 129990142 -73095390 - LTR16C LTR ERVL 0 491 200 217 326 58 0 chr5 129990463 129990549 -73094983 - L3 LINE CR1 -786 791 701 652 249 92 107 chr5 129990722 129991285 -73094247 + MLT1H1 LTR MaLR 1 555 0 259 223 149 21 chr5 129991698 129991792 -73093740 - L2 LINE L2 0 3313 3208 3086 162 25 0 chr5 129991939 129992451 -73093081 - LTR45 LTR ERV1 0 525 1 22 0 0 0 chr5 129992544 129992566 -73092966 + AT_rich Low_complexity Low_complexity 1 22 0 518 161 88 143 chr5 129992573 129992686 -73092846 - MIR SINE MIR -10 252 134 432 0 0 0 chr5 129992686 129992734 -73092798 + (TA)n Simple_repeat Simple_repeat 2 49 0 2202 128 0 0 chr5 129992734 129993038 -73092494 - AluSg SINE Alu -6 304 1 518 161 88 143 chr5 129993038 129993140 -73092392 - MIR SINE MIR -126 136 48 464 333 77 0 chr5 129994027 129994222 -73091310 - MIR SINE MIR 0 262 53 23 0 0 0 chr5 129994638 129994661 -73090871 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 129995124 129995145 -73090387 + AT_rich Low_complexity Low_complexity 1 21 0 409 305 0 25 chr5 129995331 129995449 -73090083 - MER5B DNA MER1_type -63 115 1 465 324 92 0 chr5 129995573 129995780 -73089752 + MIR SINE MIR 31 256 -6 279 0 0 0 chr5 129995842 129995873 -73089659 + (CA)n Simple_repeat Simple_repeat 2 32 0 385 247 100 27 chr5 129996277 129996427 -73089105 - MIR3 SINE MIR -27 181 21 308 248 231 8 chr5 129996460 129996577 -73088955 - MER5A DNA MER1_type -2 187 45 213 282 28 0 chr5 129997065 129997136 -73088396 + (TTA)n Simple_repeat Simple_repeat 1 73 0 2225 105 0 10 chr5 130000160 130000456 -73085076 - AluSx SINE Alu -19 293 1 2759 56 0 3 chr5 130000742 130001102 -73084430 - LTR7 LTR ERV1 -2 448 90 1321 50 6 6 chr5 130001110 130001292 -73084240 - LTR7 LTR ERV1 -268 182 1 466 331 63 37 chr5 130001293 130001674 -73083858 - L1MC/D LINE L1 -2011 5797 5407 622 325 112 14 chr5 130001676 130002033 -73083499 - L2 LINE L2 0 3313 2922 2405 152 23 35 chr5 130002034 130002177 -73083355 + L1MB5 LINE L1 5701 5844 -330 1272 162 117 66 chr5 130002177 130002603 -73082929 + LTR7 LTR ERV1 1 448 -2 2405 152 23 35 chr5 130002603 130002939 -73082593 + L1MB5 LINE L1 5844 6174 0 1503 237 79 53 chr5 130003180 130003750 -73081782 - L1MCc LINE L1 -5817 606 22 263 314 42 38 chr5 130003779 130004043 -73081489 - L1MC/D LINE L1 -1301 4845 4581 1252 138 18 0 chr5 130004257 130004474 -73081058 - L1MA2 LINE L1 0 6304 6084 311 299 31 10 chr5 130004585 130004682 -73080850 + MIR SINE MIR 108 206 -56 2154 47 0 40 chr5 130004689 130004965 -73080567 + AluY SINE Alu 1 265 -46 195 335 176 29 chr5 130005241 130005486 -73080046 + L2 LINE L2 1994 2274 -1040 9624 35 1 1 chr5 130006195 130007377 -73078155 - L1P LINE L1 -3629 2517 1336 26 0 0 0 chr5 130007856 130007882 -73077650 + AT_rich Low_complexity Low_complexity 1 26 0 922 356 48 7 chr5 130008482 130008937 -73076595 + HERV16 LTR ERVL 983 1456 -3540 207 154 15 62 chr5 130009064 130009129 -73076403 + A-rich Low_complexity Low_complexity 4 65 0 321 297 0 0 chr5 130010335 130010409 -73075123 + MER58B DNA MER1_type 219 292 -49 225 0 0 0 chr5 130010502 130010527 -73075005 + (T)n Simple_repeat Simple_repeat 1 25 0 354 134 0 0 chr5 130010814 130010881 -73074651 + (CA)n Simple_repeat Simple_repeat 1 67 0 23 33 0 0 chr5 130011514 130011544 -73073988 + AT_rich Low_complexity Low_complexity 1 30 0 198 350 107 10 chr5 130012246 130012349 -73073183 - L2 LINE L2 -2 3311 3199 677 283 82 12 chr5 130012384 130012628 -73072904 + MIR SINE MIR 2 262 0 24 0 0 0 chr5 130013132 130013156 -73072376 + AT_rich Low_complexity Low_complexity 1 24 0 511 348 83 38 chr5 130013598 130014067 -73071465 + MLT1K LTR MaLR 13 502 -86 373 308 33 0 chr5 130014238 130014358 -73071174 + MER110A LTR ERV1 303 426 -42 6855 76 1 3 chr5 130014714 130016030 -73069502 - L1P2 LINE L1 -406 5748 4436 998 196 25 10 chr5 130017502 130017701 -73067831 + MLT1C LTR MaLR 34 235 -232 339 233 44 0 chr5 130018583 130018673 -73066859 + MLT1J1 LTR MaLR 54 147 -299 354 333 58 12 chr5 130018768 130018939 -73066593 + MLT1J2 LTR MaLR 272 450 0 189 266 31 86 chr5 130021142 130021270 -73064262 + MIR SINE MIR 22 142 -120 7472 32 14 0 chr5 130022585 130023616 -73061916 - L1PA3 LINE L1 0 6155 5121 338 299 23 61 chr5 130023738 130023835 -73061697 + HERV16 LTR ERVL 1858 1957 -3039 1526 202 51 14 chr5 130023835 130024187 -73061345 - MLT1A1 LTR MaLR 0 365 1 338 299 23 61 chr5 130024187 130024303 -73061229 + HERV16 LTR ERVL 1957 2063 -2933 2640 154 34 105 chr5 130024328 130024946 -73060586 - MER54B LTR ERVL 0 793 220 389 190 20 60 chr5 130025046 130025146 -73060386 - MER66-int LTR ERV1 -1280 5396 5301 369 0 0 0 chr5 130025265 130025306 -73060226 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1894 152 10 3 chr5 130025371 130025681 -73059851 + AluSq SINE Alu 1 312 -1 331 300 67 78 chr5 130026194 130026464 -73059068 - HAL1b LINE L1 -1063 285 19 324 83 0 0 chr5 130027794 130027842 -73057690 + (CA)n Simple_repeat Simple_repeat 1 48 0 221 236 18 0 chr5 130028868 130028923 -73056609 + GA-rich Low_complexity Low_complexity 6 61 0 1090 228 58 81 chr5 130029579 130030048 -73055484 - MER39 LTR ERV1 0 707 250 778 219 51 0 chr5 130030384 130030562 -73054970 - MER5A DNA MER1_type -2 187 1 2216 66 30 7 chr5 130030869 130031172 -73054360 - AluY SINE Alu -1 310 1 216 0 0 0 chr5 130031581 130031605 -73053927 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 451 216 12 99 chr5 130031683 130031713 -73053819 - L1MA10 LINE L1 -1 6333 6304 385 254 52 52 chr5 130031713 130031906 -73053626 - L1ME1 LINE L1 0 6166 5974 336 237 11 32 chr5 130031917 130032010 -73053522 + L1ME1 LINE L1 5894 5984 -180 271 308 110 15 chr5 130032002 130032337 -73053195 + L1MC4 LINE L1 4096 4462 -1684 * 231 257 18 37 chr5 130032356 130032465 -73053067 + L1MC4 LINE L1 4552 4658 -1488 311 264 88 34 chr5 130032620 130032768 -73052764 - MLT1J1 LTR MaLR -2 444 289 2169 120 3 0 chr5 130033987 130034296 -73051236 - AluSp SINE Alu -3 310 1 378 0 0 0 chr5 130034361 130034403 -73051129 + (TA)n Simple_repeat Simple_repeat 1 42 0 314 291 120 17 chr5 130034442 130034676 -73050856 + L1MC4 LINE L1 5671 5928 -1880 22 0 0 0 chr5 130034854 130034876 -73050656 + AT_rich Low_complexity Low_complexity 1 22 0 247 208 0 0 chr5 130036808 130036856 -73048676 - MER2 DNA MER2_type 0 345 298 492 85 0 194 chr5 130036941 130037017 -73048515 - MER2 DNA MER2_type -146 199 156 1465 196 26 45 chr5 130037017 130037328 -73048204 - AluJo SINE Alu -7 305 1 492 85 0 194 chr5 130037328 130037380 -73048152 - MER2 DNA MER2_type -189 156 96 23 0 0 0 chr5 130037472 130037495 -73048037 + AT_rich Low_complexity Low_complexity 1 23 0 253 207 35 0 chr5 130037525 130037583 -73047949 - MER2 DNA MER2_type -285 60 1 604 108 0 0 chr5 130039243 130039326 -73046206 - AluS SINE Alu -228 84 2 411 357 11 22 chr5 130039330 130039515 -73046017 - MER5A DNA MER1_type 0 189 7 281 272 0 22 chr5 130039622 130039714 -73045818 - L1MC4 LINE L1 -1339 6703 6614 270 229 73 37 chr5 130039624 130039733 -73045799 + L1MC4 LINE L1 6614 6726 -1316 * 3452 183 41 3 chr5 130041498 130042202 -73043330 - L1MD1 LINE L1 0 6242 5512 2429 237 149 38 chr5 130042202 130042715 -73042817 - L1MDa LINE L1 -5675 865 238 2560 95 5 22 chr5 130042715 130043085 -73042447 + THE1B LTR MaLR 1 364 0 2429 237 149 38 chr5 130043085 130043334 -73042198 - L1MDa LINE L1 -6302 238 18 379 325 50 0 chr5 130043405 130043525 -73042007 - L2 LINE L2 0 3272 3147 183 80 0 0 chr5 130043546 130043571 -73041961 + (CAAAC)n Simple_repeat Simple_repeat 4 28 0 303 222 0 14 chr5 130045484 130045556 -73039976 - MLT1J1 LTR MaLR -21 425 355 546 261 0 2 chr5 130045683 130045817 -73039715 - MLT1J1 LTR MaLR -226 183 51 21 0 0 0 chr5 130046930 130046951 -73038581 + AT_rich Low_complexity Low_complexity 1 21 0 1636 170 122 24 chr5 130047013 130047389 -73038143 - L1MB5 LINE L1 0 6174 5762 217 305 0 0 chr5 130047510 130047569 -73037963 + GA-rich Low_complexity Low_complexity 2 60 0 1431 283 29 54 chr5 130047681 130048307 -73037225 + L1MEc LINE L1 207 816 -5580 709 323 67 57 chr5 130048311 130048375 -73037157 - L1MEc LINE L1 -4997 1724 1662 2295 97 0 3 chr5 130048375 130048683 -73036849 - AluY SINE Alu -4 307 1 709 323 67 57 chr5 130048683 130049913 -73035619 - L1MEc LINE L1 -5059 1662 417 561 316 115 36 chr5 130049983 130050347 -73035185 + L2 LINE L2 2911 3303 -10 2236 102 0 19 chr5 130050347 130050661 -73034871 + AluSq SINE Alu 5 312 -1 23 78 0 0 chr5 130050903 130050954 -73034578 + AT_rich Low_complexity Low_complexity 1 51 0 607 168 16 24 chr5 130052879 130053004 -73032528 - L1MEc LINE L1 -6399 141 18 342 333 50 0 chr5 130053076 130053196 -73032336 - L2 LINE L2 0 3272 3147 332 301 42 42 chr5 130054276 130054419 -73031113 - L2 LINE L2 -243 3070 2928 905 293 73 50 chr5 130054642 130055079 -73030453 + L2 LINE L2 2867 3313 0 269 314 85 11 chr5 130056387 130056575 -73028957 - MLT1G1 LTR MaLR 0 567 366 565 289 90 33 chr5 130056635 130056936 -73028596 - MLT1G1 LTR MaLR -277 318 1 243 234 0 0 chr5 130057141 130057188 -73028344 - L2 LINE L2 -4 3309 3263 1295 127 96 45 chr5 130058003 130058294 -73027238 + THE1C LTR MaLR 1 306 -69 584 274 13 0 chr5 130060464 130060621 -73024911 - MLT1L LTR MaLR -2 613 455 562 288 52 110 chr5 130061099 130061543 -73023989 - MLT1K LTR MaLR -47 541 124 183 42 0 0 chr5 130061574 130061598 -73023934 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 1464 294 141 21 chr5 130062924 130063946 -73021586 - L2 LINE L2 -4 3309 2111 427 215 38 0 chr5 130065409 130065488 -73020044 + MER7A DNA MER2_type 1 80 -266 26 30 0 0 chr5 130065491 130065524 -73020008 + AT_rich Low_complexity Low_complexity 1 33 0 1931 129 52 0 chr5 130065745 130066031 -73019501 + AluSg SINE Alu 3 303 -7 1260 150 133 0 chr5 130066371 130066604 -73018928 + MER7A DNA MER2_type 74 337 -9 192 135 0 0 chr5 130067523 130067560 -73017972 + (GA)n Simple_repeat Simple_repeat 2 38 0 264 122 0 0 chr5 130069300 130069341 -73016191 + (TC)n Simple_repeat Simple_repeat 2 42 0 369 58 0 0 chr5 130069344 130069396 -73016136 + (TG)n Simple_repeat Simple_repeat 2 53 0 3323 149 20 6 chr5 130070140 130070677 -73014855 + Tigger3b DNA MER2_type 1 545 -686 423 279 61 20 chr5 130071297 130071444 -73014088 - MIR SINE MIR -57 205 53 1501 288 55 38 chr5 130071597 130072174 -73013358 - MLT1K LTR MaLR 0 588 2 477 171 0 0 chr5 130072419 130072507 -73013025 + (TG)n Simple_repeat Simple_repeat 1 88 0 216 0 0 0 chr5 130072782 130072806 -73012726 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 1941 124 47 7 chr5 130073200 130073499 -73012033 - AluSq SINE Alu 0 313 3 6206 54 20 35 chr5 130073650 130074495 -73011037 - L1PA7 LINE L1 0 6154 5321 2205 107 7 0 chr5 130074495 130074786 -73010746 - AluSq SINE Alu -12 301 9 6206 54 20 35 chr5 130074786 130074808 -73010724 - L1PA7 LINE L1 -833 5321 5300 2927 71 11 47 chr5 130074807 130075258 -73010274 + L1PA7 LINE L1 4869 5303 -843 * 27 62 0 0 chr5 130075346 130075394 -73010138 + AT_rich Low_complexity Low_complexity 1 48 0 1805 142 67 0 chr5 130075612 130075894 -73009638 + AluSx SINE Alu 1 301 -11 228 193 0 84 chr5 130075947 130076066 -73009466 + T-rich Low_complexity Low_complexity 5 113 0 278 240 35 29 chr5 130076671 130076842 -73008690 + (TATAA)n Simple_repeat Simple_repeat 1 172 0 228 198 43 9 chr5 130076843 130076959 -73008573 + (TA)n Simple_repeat Simple_repeat 1 120 0 1672 195 0 7 chr5 130076959 130077246 -73008286 - AluJo SINE Alu -26 286 2 25 0 0 0 chr5 130077858 130077883 -73007649 + AT_rich Low_complexity Low_complexity 1 25 0 208 182 0 23 chr5 130078517 130078561 -73006971 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 300 242 137 16 chr5 130079862 130079986 -73005546 + MIR SINE MIR 123 261 -1 583 206 30 8 chr5 130080015 130080146 -73005386 + MER94 DNA DNA 1 134 0 207 316 31 21 chr5 130080392 130080489 -73005043 - MIR SINE MIR -36 172 68 334 336 69 0 chr5 130080950 130081081 -73004451 - MIR SINE MIR 0 262 123 704 250 78 6 chr5 130081539 130081719 -73003813 - MIR SINE MIR -51 211 19 2273 95 18 0 chr5 130081884 130082210 -73003322 + L1PA8 LINE L1 5840 6171 -1 2868 222 29 46 chr5 130082952 130083186 -73002346 - L1ME1 LINE L1 -5 6161 5925 919 224 88 10 chr5 130083186 130083391 -73002141 + MER58A DNA MER1_type 1 221 -3 2868 222 29 46 chr5 130083391 130083992 -73001540 - L1ME1 LINE L1 -241 5925 5369 258 81 0 0 chr5 130083992 130084029 -73001503 + (TA)n Simple_repeat Simple_repeat 1 37 0 2868 222 29 46 chr5 130084029 130084496 -73001036 - L1ME1 LINE L1 -797 5369 4896 2181 99 7 3 chr5 130084501 130084804 -73000728 + AluSg SINE Alu 1 304 -6 3943 174 82 8 chr5 130084831 130085603 -72999929 + L1PA13 LINE L1 2 830 -5957 6003 243 70 48 chr5 130085646 130087870 -72997662 + L1M4 LINE L1 2334 4619 -1527 2158 57 15 0 chr5 130087870 130088133 -72997399 - AluSp SINE Alu -46 267 1 6003 243 70 48 chr5 130088133 130088391 -72997141 + L1M4 LINE L1 4619 4870 -1276 3571 94 0 4 chr5 130088418 130088917 -72996615 - L1PA13 LINE L1 -5 6158 5662 6992 181 14 75 chr5 130088926 130090403 -72995129 - SVA Other Other 0 1386 1 435 204 114 0 chr5 130090494 130090582 -72994950 - FRAM SINE Alu -47 129 32 1383 96 10 0 chr5 130090583 130090780 -72994752 - L1P4 LINE L1 -489 6325 6127 2772 127 5 11 chr5 130090786 130091148 -72994384 - L1PB1 LINE L1 -1 6150 5790 339 25 0 0 chr5 130091148 130091188 -72994344 + (TG)n Simple_repeat Simple_repeat 2 41 0 2772 127 5 11 chr5 130091188 130091274 -72994258 - L1PB1 LINE L1 -361 5790 5705 2752 151 11 17 chr5 130091274 130091798 -72993734 - MER41A-int LTR ERV1 -1462 3553 3033 2304 95 0 0 chr5 130091803 130092098 -72993434 - AluSg SINE Alu -15 295 1 747 78 0 0 chr5 130092121 130092224 -72993308 + (TTC)n Simple_repeat Simple_repeat 2 104 0 404 119 0 0 chr5 130092225 130092284 -72993248 - MER41A-int LTR ERV1 -3987 1959 1901 2131 156 45 3 chr5 130092285 130092637 -72992895 - MER41A-int LTR ERV1 -5166 2371 2005 4591 102 41 24 chr5 130092638 130093316 -72992216 - MER41A-int LTR ERV1 -5256 690 1 913 159 0 19 chr5 130093317 130093474 -72992058 - MER41A LTR ERV1 -1 553 400 15016 179 26 120 chr5 130093474 130093711 -72991821 - L1P4 LINE L1 -677 6142 5884 2492 48 0 0 chr5 130093711 130094006 -72991526 - AluY SINE Alu -16 295 1 15016 179 26 120 chr5 130094006 130094714 -72990818 - L1P4 LINE L1 -935 5884 5111 1781 138 76 34 chr5 130094714 130095068 -72990464 - THE1C LTR MaLR 0 375 7 1092 165 75 56 chr5 130095066 130095332 -72990200 - THE1C LTR MaLR -104 271 1 * 15016 179 26 120 chr5 130095332 130096000 -72989532 - L1P4 LINE L1 -1972 4847 4093 2304 64 3 3 chr5 130096000 130096314 -72989218 - AluY SINE Alu 0 314 1 15016 179 26 120 chr5 130096314 130097174 -72988358 - L1P4 LINE L1 -2726 4093 3153 2110 129 3 3 chr5 130097174 130097477 -72988055 - AluSp SINE Alu -10 303 1 15016 179 26 120 chr5 130097477 130098806 -72986726 - L1P4 LINE L1 -3666 3153 2381 7795 138 13 58 chr5 130098806 130100151 -72985381 + HSMAR1 DNA Mariner 4 1287 0 15016 179 26 120 chr5 130100151 130101557 -72983975 - L1P4 LINE L1 -4438 2381 844 4379 188 54 3 chr5 130101560 130102510 -72983022 - L1 LINE L1 -901 5245 4248 1838 266 136 19 chr5 130102521 130102803 -72982729 - L1MEc LINE L1 -5577 819 571 208 51 26 26 chr5 130102803 130102842 -72982690 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1838 266 136 19 chr5 130102842 130103252 -72982280 - L1MEc LINE L1 -5825 571 46 26 0 0 0 chr5 130103424 130103450 -72982082 + AT_rich Low_complexity Low_complexity 1 26 0 198 0 0 0 chr5 130104349 130104371 -72981161 + (T)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr5 130105189 130105217 -72980315 + AT_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr5 130105236 130105292 -72980240 + AT_rich Low_complexity Low_complexity 1 56 0 1995 134 0 0 chr5 130105590 130105873 -72979659 - AluSx SINE Alu -29 283 1 280 161 0 138 chr5 130106015 130106102 -72979430 - MLT1H LTR MaLR 0 549 475 490 260 66 17 chr5 130106476 130106657 -72978875 + MLT1K LTR MaLR 397 586 -2 266 290 48 16 chr5 130106764 130106888 -72978644 - MIR SINE MIR -44 218 91 205 197 79 105 chr5 130107612 130107688 -72977844 + MIR SINE MIR 39 112 -96 287 238 24 24 chr5 130108071 130108155 -72977377 + MER117 DNA MER1_type 90 173 -24 1154 147 82 108 chr5 130110380 130110656 -72974876 + MER39 LTR ERV1 51 490 -217 1752 169 89 43 chr5 130110656 130111119 -72974413 - LTR2B LTR ERV1 0 490 7 1266 127 14 14 chr5 130111120 130111341 -72974191 + MER39 LTR ERV1 487 707 0 182 306 0 0 chr5 130111341 130111390 -72974142 - MER5B DNA MER1_type -1 177 129 2356 92 0 7 chr5 130112483 130112789 -72972743 + AluY SINE Alu 2 305 -6 2316 164 10 10 chr5 130113028 130113431 -72972101 - MER57A LTR ERV1 0 403 1 246 228 37 101 chr5 130113459 130113650 -72971882 - MIR3 SINE MIR -41 167 29 1700 187 40 73 chr5 130113934 130114021 -72971511 - MER39 LTR ERV1 -19 688 600 513 0 0 0 chr5 130114021 130114078 -72971454 + (TTTTA)n Simple_repeat Simple_repeat 3 59 0 2276 83 0 3 chr5 130114087 130114376 -72971156 - AluSq SINE Alu -25 288 1 1700 187 40 73 chr5 130114376 130114793 -72970739 - MER39 LTR ERV1 -115 592 7 21 0 0 0 chr5 130115818 130115839 -72969693 + AT_rich Low_complexity Low_complexity 1 21 0 468 338 54 20 chr5 130117542 130117746 -72967786 - MIR SINE MIR -49 213 3 387 0 0 0 chr5 130118002 130118045 -72967487 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2388 166 76 0 chr5 130118291 130118738 -72966794 + MER31A LTR ERV1 1 481 -4 2452 101 53 25 chr5 130120270 130120706 -72964826 - LTR7 LTR ERV1 -2 448 1 2354 85 45 13 chr5 130120706 130121084 -72964448 - HERVH LTR ERV1 0 7713 7324 1272 120 23 9 chr5 130121084 130121301 -72964231 - HERVH LTR ERV1 -1894 5819 5600 2903 136 0 4 chr5 130121305 130121921 -72963611 - HERVH LTR ERV1 -2567 5146 4488 3277 89 4 4 chr5 130121923 130122417 -72963115 - HERVH LTR ERV1 -3720 3993 3500 791 143 27 0 chr5 130122416 130122563 -72962969 - HERVH LTR ERV1 -4423 3290 3140 * 14340 119 22 28 chr5 130122557 130125666 -72959866 - HERVH LTR ERV1 -4726 2987 1 2606 90 60 23 chr5 130125668 130126100 -72959432 - LTR7 LTR ERV1 -2 448 1 180 351 91 13 chr5 130127210 130127287 -72958245 - L2 LINE L2 -36 3277 3195 35 0 0 0 chr5 130127383 130127418 -72958114 + AT_rich Low_complexity Low_complexity 1 35 0 261 254 74 66 chr5 130128064 130128186 -72957346 + MIR3 SINE MIR 70 192 -16 415 221 260 0 chr5 130128296 130128423 -72957109 + MER5A DNA MER1_type 30 189 0 6216 137 52 29 chr5 130130573 130131775 -72953757 + Tigger3b DNA MER2_type 1 1230 -1 232 262 125 24 chr5 130134046 130134214 -72951318 - MLT1L LTR MaLR -313 302 118 2408 87 3 0 chr5 130134460 130134770 -72950762 - AluY SINE Alu 0 311 1 249 33 0 0 chr5 130135673 130135703 -72949829 + U6 snRNA snRNA 1 30 -77 281 297 34 47 chr5 130135833 130135981 -72949551 + L2 LINE L2 3080 3225 -88 27 29 0 0 chr5 130136187 130136221 -72949311 + AT_rich Low_complexity Low_complexity 1 34 0 5119 76 12 1 chr5 130136295 130136978 -72948554 + L1PA10 LINE L1 5479 6168 0 912 261 48 67 chr5 130137062 130137653 -72947879 - L2 LINE L2 -3 3310 2742 1810 171 7 0 chr5 130137965 130138257 -72947275 - AluJo SINE Alu -18 294 1 257 306 83 0 chr5 130139405 130139477 -72946055 + MIR SINE MIR 62 139 -69 186 103 0 0 chr5 130139477 130139506 -72946026 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 1164 45 0 0 chr5 130140145 130140277 -72945255 + AluY SINE Alu 1 132 -179 1875 64 0 4 chr5 130140279 130140514 -72945018 + AluY SINE Alu 1 234 -77 1521 58 5 0 chr5 130140514 130140703 -72944829 + AluY SINE Alu 121 311 0 472 267 91 6 chr5 130140936 130141101 -72944431 + MLT1J LTR MaLR 1 179 -332 272 285 19 13 chr5 130141866 130142024 -72943508 - L1MC4a LINE L1 -1897 5911 5753 317 363 21 29 chr5 130142144 130142384 -72943148 - L1ME3A LINE L1 -90 6080 5843 21 0 0 0 chr5 130142416 130142437 -72943095 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr5 130142481 130142523 -72943009 + (TC)n Simple_repeat Simple_repeat 2 43 0 315 122 0 0 chr5 130142523 130142572 -72942960 + (TA)n Simple_repeat Simple_repeat 2 50 0 260 263 95 0 chr5 130142577 130142672 -72942860 - MIR SINE MIR -59 203 100 298 85 21 0 chr5 130142672 130142719 -72942813 - U5 snRNA snRNA -68 48 1 229 216 118 0 chr5 130142719 130142770 -72942762 - MIR SINE MIR -150 112 56 450 0 0 0 chr5 130193191 130193241 -72892291 + (TA)n Simple_repeat Simple_repeat 1 50 0 535 183 0 0 chr5 130193638 130193731 -72891801 - Tigger7 DNA MER2_type 0 2587 2495 1580 177 4 14 chr5 130193731 130194008 -72891524 - Tigger7 DNA MER2_type -2213 274 1 829 259 67 0 chr5 130194037 130194347 -72891185 - AluY SINE Alu 0 329 1 954 282 4 14 chr5 130194481 130194758 -72890774 - Tigger7 DNA MER2_type -2213 274 1 2288 62 65 0 chr5 130194805 130195097 -72890435 - AluY SINE Alu 0 311 1 230 347 0 0 chr5 130195170 130195245 -72890287 - MER5C DNA MER1_type -248 76 2 2192 133 55 6 chr5 130195978 130196325 -72889207 - THE1B LTR MaLR 0 364 1 341 310 19 63 chr5 130198345 130198503 -72887029 - L3 LINE CR1 -13 1564 1414 21 71 0 0 chr5 130198623 130198665 -72886867 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr5 130198914 130198939 -72886593 + (T)n Simple_repeat Simple_repeat 1 25 0 375 403 60 9 chr5 130199666 130199882 -72885650 - L2 LINE L2 -30 3242 3016 438 281 38 38 chr5 130199889 130200088 -72885444 + MIR SINE MIR 55 252 -10 339 306 132 0 chr5 130200104 130200248 -72885284 - MIR3 SINE MIR -13 195 33 709 320 81 44 chr5 130200675 130200723 -72884809 - L3 LINE CR1 -2 1575 1530 726 188 29 113 chr5 130200723 130200768 -72884764 - MER20 DNA MER1_type 0 219 172 2273 100 3 3 chr5 130200768 130201077 -72884455 - AluSg1 SINE Alu 0 309 1 726 188 29 113 chr5 130201077 130201270 -72884262 - MER20 DNA MER1_type -47 172 1 709 320 81 44 chr5 130201270 130201680 -72883852 - L3 LINE CR1 -47 1530 1100 357 316 44 0 chr5 130201698 130201812 -72883720 - MIR SINE MIR -58 150 32 332 248 76 9 chr5 130202040 130202145 -72883387 + MIR SINE MIR 96 207 -55 275 319 0 0 chr5 130203296 130203368 -72882164 + LTR67 LTR ERVL 125 196 -361 496 235 159 6 chr5 130203613 130203783 -72881749 + MIR SINE MIR 57 252 -10 249 328 48 53 chr5 130204121 130204310 -72881222 - L2 LINE L2 -237 3035 2848 514 143 2 34 chr5 130204412 130204532 -72881000 + MLT-int LTR MaLR 1530 1707 -6 2252 191 21 0 chr5 130204537 130204960 -72880572 + MSTB1 LTR MaLR 1 432 0 489 333 56 9 chr5 130204974 130205190 -72880342 - L2 LINE L2 -598 2716 2491 270 311 105 44 chr5 130205825 130206053 -72879479 + MIR SINE MIR 13 254 -8 183 42 0 0 chr5 130206491 130206515 -72879017 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 219 403 32 8 chr5 130206768 130206892 -72878640 - L2 LINE L2 -9 3263 3137 6003 101 12 3 chr5 130206895 130207826 -72877706 + L1PA13 LINE L1 5214 6152 -11 259 288 0 25 chr5 130207914 130207994 -72877538 + L2 LINE L2 3195 3272 0 257 118 20 0 chr5 130208572 130208623 -72876909 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 625 295 6 12 chr5 130208971 130209144 -72876388 + MER5B DNA MER1_type 7 178 0 435 260 162 19 chr5 130209191 130209345 -72876187 - MER5A DNA MER1_type 0 189 14 2101 147 35 17 chr5 130209411 130209757 -72875775 - THE1B LTR MaLR -11 353 2 234 0 0 0 chr5 130210368 130210394 -72875138 + (A)n Simple_repeat Simple_repeat 1 26 0 234 0 0 0 chr5 130211102 130211128 -72874404 + (A)n Simple_repeat Simple_repeat 1 26 0 2100 108 0 48 chr5 130214473 130214789 -72870743 - AluSx SINE Alu -11 301 1 2162 66 0 0 chr5 130214967 130215238 -72870294 - AluY SINE Alu -40 271 1 21 36 0 0 chr5 130217498 130217526 -72868006 + AT_rich Low_complexity Low_complexity 1 28 0 467 311 6 28 chr5 130217636 130217816 -72867716 - MIR SINE MIR -34 228 53 740 295 105 24 chr5 130217983 130218356 -72867176 + MLT1I LTR MaLR 1 403 -6 213 39 0 0 chr5 130218716 130218742 -72866790 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6782 64 6 1 chr5 130218742 130220205 -72865327 - L1PA7 LINE L1 -16 6138 4670 1618 84 4 4 chr5 130220205 130220430 -72865102 + L1PA7 LINE L1 4435 4659 -1487 200 86 29 0 chr5 130220543 130220578 -72864954 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 2424 117 17 17 chr5 130221308 130221668 -72863864 + MER1A DNA MER1_type 170 529 0 1367 167 9 0 chr5 130222501 130222723 -72862809 - MER58A DNA MER1_type 0 224 1 279 0 0 0 chr5 130222751 130222782 -72862750 + (TG)n Simple_repeat Simple_repeat 2 32 0 220 219 0 16 chr5 130222782 130222846 -72862686 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 221 374 99 37 chr5 130222861 130223155 -72862377 + L2 LINE L2 2065 2376 -938 203 380 134 7 chr5 130223652 130223787 -72861745 - L2 LINE L2 -31 3241 3089 241 323 61 10 chr5 130223787 130223886 -72861646 + MIR SINE MIR 3 106 -156 1824 211 11 3 chr5 130223887 130224243 -72861289 - MLT1A1 LTR MaLR 0 365 7 421 239 42 49 chr5 130224253 130224395 -72861137 + MIR SINE MIR 108 248 -14 328 222 30 22 chr5 130224395 130224492 -72861040 + (TA)n Simple_repeat Simple_repeat 2 102 -35 2279 153 64 7 chr5 130224492 130224897 -72860635 - MSTA LTR MaLR 0 428 1 328 222 30 22 chr5 130224897 130224934 -72860598 + (TA)n Simple_repeat Simple_repeat 102 137 0 194 275 63 70 chr5 130224966 130225108 -72860424 - MIR SINE MIR -96 166 26 239 305 127 19 chr5 130225334 130225488 -72860044 + MIR SINE MIR 38 206 -55 270 81 0 0 chr5 130227400 130227437 -72858095 + (TCTCCC)n Simple_repeat Simple_repeat 6 42 0 21 0 0 0 chr5 130228230 130228251 -72857281 + AT_rich Low_complexity Low_complexity 1 21 0 294 29 0 0 chr5 130228905 130228932 -72856600 + (GAA)n Simple_repeat Simple_repeat 1 62 0 294 29 0 0 chr5 130228932 130228967 -72856565 + (GAA)n Simple_repeat Simple_repeat 2 36 0 234 156 0 0 chr5 130229097 130229142 -72856390 + A-rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 130230229 130230250 -72855282 + AT_rich Low_complexity Low_complexity 1 21 0 195 309 122 57 chr5 130230250 130230496 -72855036 + L3 LINE CR1 1228 1489 -88 234 305 0 0 chr5 130231342 130231401 -72854131 + (CA)n Simple_repeat Simple_repeat 2 60 0 1912 177 6 23 chr5 130231511 130231862 -72853670 - MER7A DNA MER2_type 0 346 4 459 314 83 16 chr5 130232897 130233139 -72852393 + LTR16A1 LTR ERVL 200 457 0 1357 334 82 46 chr5 130233375 130234626 -72850906 + HERV16 LTR ERVL 261 1556 -3440 910 327 45 49 chr5 130234710 130235011 -72850521 + HERV16 LTR ERVL 1739 2039 -2957 2091 134 0 7 chr5 130235011 130235317 -72850215 - AluSq SINE Alu -9 304 1 910 327 45 49 chr5 130235317 130235486 -72850046 + HERV16 LTR ERVL 2039 2207 -2789 764 391 30 13 chr5 130235483 130236270 -72849262 + HERVL LTR ERVL 3969 4838 -926 * 1806 255 52 81 chr5 130236539 130236994 -72848538 - L1ME LINE L1 -5176 894 427 195 42 0 0 chr5 130236994 130237018 -72848514 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 1806 255 52 81 chr5 130237018 130237402 -72848130 - L1ME LINE L1 -5643 427 82 294 29 0 0 chr5 130237402 130237437 -72848095 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1806 255 52 81 chr5 130237437 130237509 -72848023 - L1ME LINE L1 -5988 82 9 574 311 53 81 chr5 130237918 130238388 -72847144 + LTR16A1 LTR ERVL 1 457 0 235 250 51 17 chr5 130239067 130239177 -72846355 - MIR SINE MIR -58 150 37 349 344 11 50 chr5 130239461 130239641 -72845891 - MER5B DNA MER1_type -5 173 1 1680 139 8 0 chr5 130240648 130240892 -72844640 - AluSx SINE Alu -66 246 1 2599 45 0 3 chr5 130240931 130241241 -72844291 - AluY SINE Alu -2 309 1 21 0 0 0 chr5 130241664 130241685 -72843847 + AT_rich Low_complexity Low_complexity 1 21 0 43 35 0 0 chr5 130241864 130241921 -72843611 + AT_rich Low_complexity Low_complexity 1 57 0 2673 249 44 44 chr5 130242190 130243766 -72841766 - L1ME2 LINE L1 -60 6104 4531 602 280 63 74 chr5 130244742 130245092 -72840440 - L2 LINE L2 0 3313 2968 450 0 0 0 chr5 130246176 130246226 -72839306 + (TA)n Simple_repeat Simple_repeat 1 50 0 261 321 104 22 chr5 130246492 130246626 -72838906 - MIR3 SINE MIR -55 153 9 268 234 62 0 chr5 130246849 130246913 -72838619 + MIR SINE MIR 180 247 -15 43 0 0 0 chr5 130246926 130246969 -72838563 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 130247669 130247691 -72837841 + AT_rich Low_complexity Low_complexity 1 22 0 276 309 112 26 chr5 130248241 130248393 -72837139 + MER5A DNA MER1_type 17 181 -8 508 111 0 0 chr5 130251496 130251568 -72833964 + FRAM/FAM SINE Alu 13 84 -92 393 296 163 6 chr5 130252911 130253083 -72832449 + MIR SINE MIR 2 200 -62 207 298 58 99 chr5 130253862 130254033 -72831499 + MIR SINE MIR 28 191 -71 507 95 0 0 chr5 130254122 130254196 -72831336 + (TCCCC)n Simple_repeat Simple_repeat 5 78 0 1810 136 61 0 chr5 130255140 130255420 -72830112 - AluSc SINE Alu -9 300 4 358 293 63 34 chr5 130256288 130256493 -72829039 - MIR SINE MIR -2 260 50 1094 313 102 38 chr5 130256513 130257153 -72828379 + L2 LINE L2 2106 2786 -528 271 294 24 24 chr5 130257177 130257262 -72828270 + L2 LINE L2 2996 3080 -233 1882 165 10 42 chr5 130257359 130257597 -72827935 - MER39 LTR ERV1 -28 679 435 2138 163 89 3 chr5 130257597 130257989 -72827543 + MSTB LTR MaLR 1 426 0 1882 165 10 42 chr5 130257989 130258150 -72827382 - MER39 LTR ERV1 -272 435 164 577 196 138 0 chr5 130258128 130258266 -72827266 - MER39 LTR ERV1 -457 250 94 * 981 145 0 0 chr5 130258276 130258444 -72827088 + AluSg/x SINE Alu 146 313 0 348 156 11 78 chr5 130258752 130258787 -72826745 + MER39 LTR ERV1 1 37 -670 2011 158 36 30 chr5 130258787 130259149 -72826383 + THE1B LTR MaLR 1 364 0 348 156 11 78 chr5 130259149 130259203 -72826329 + MER39 LTR ERV1 37 84 -623 23 33 0 0 chr5 130259258 130259288 -72826244 + AT_rich Low_complexity Low_complexity 1 30 0 1782 156 21 3 chr5 130259413 130259695 -72825837 - AluSx SINE Alu -23 289 3 267 269 77 0 chr5 130260028 130260132 -72825400 + MER103 DNA DNA 7 118 -48 410 256 0 0 chr5 130260436 130260522 -72825010 - MER63 DNA MER1_type -297 763 678 182 268 28 42 chr5 130261056 130261127 -72824405 + L2 LINE L2 2443 2512 -802 305 265 142 71 chr5 130263212 130263423 -72822109 - L2 LINE L2 -6 3307 3082 561 260 144 28 chr5 130263693 130264577 -72820955 + L1ME LINE L1 4799 5780 -390 2094 121 3 0 chr5 130264616 130264922 -72820610 + AluY SINE Alu 1 307 -4 1623 205 6 22 chr5 130265317 130265712 -72819820 - AluJb SINE Alu 0 390 1 1421 214 30 36 chr5 130266171 130266508 -72819024 + MLT1A1 LTR MaLR 31 365 0 185 0 0 39 chr5 130266509 130266535 -72818997 + (TTATA)n Simple_repeat Simple_repeat 3 27 0 262 349 83 19 chr5 130266628 130267003 -72818529 - L1ME LINE L1 -353 5809 5411 367 273 104 64 chr5 130267068 130267877 -72817655 - L1ME LINE L1 -823 5323 4483 5827 107 8 2 chr5 130267963 130268894 -72816638 + L1PB2 LINE L1 5299 6234 0 26 0 0 0 chr5 130268895 130268921 -72816611 + AT_rich Low_complexity Low_complexity 1 26 0 332 262 105 47 chr5 130268943 130269115 -72816417 - L1ME LINE L1 -1807 4339 4158 21 0 0 0 chr5 130269153 130269174 -72816358 + AT_rich Low_complexity Low_complexity 1 21 0 553 305 57 27 chr5 130269266 130269528 -72816004 + MLT1K LTR MaLR 315 584 -4 285 279 0 25 chr5 130271643 130271722 -72813810 + L2 LINE L2 3196 3272 0 26 0 0 0 chr5 130271828 130271854 -72813678 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5 130272188 130272221 -72813311 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 130273434 130273457 -72812075 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 130273535 130273557 -72811975 + AT_rich Low_complexity Low_complexity 1 22 0 294 73 0 0 chr5 130273718 130273759 -72811773 + (TA)n Simple_repeat Simple_repeat 2 42 0 921 174 7 0 chr5 130273897 130274052 -72811480 + FRAM SINE Alu 17 172 -4 23 33 0 0 chr5 130274064 130274094 -72811438 + AT_rich Low_complexity Low_complexity 1 30 0 1907 171 62 8 chr5 130277128 130277496 -72808036 - MLT1B LTR MaLR 0 390 3 1125 195 164 40 chr5 130279058 130279142 -72806390 + MLT1A1 LTR MaLR 31 103 -262 2234 181 9 45 chr5 130279142 130279583 -72805949 - MSTC LTR MaLR -2 426 2 1125 195 164 40 chr5 130279583 130279796 -72805736 + MLT1A1 LTR MaLR 103 365 0 227 263 25 0 chr5 130280210 130280290 -72805242 + (TTCA)n Simple_repeat Simple_repeat 4 85 0 22 0 0 0 chr5 130281308 130281330 -72804202 + AT_rich Low_complexity Low_complexity 1 22 0 217 344 0 0 chr5 130281824 130281888 -72803644 - MIR SINE MIR -192 70 7 2427 112 11 19 chr5 130282207 130282574 -72802958 - THE1B LTR MaLR 0 364 1 4248 215 68 5 chr5 130282626 130283599 -72801933 - MER45B DNA AcHobo 0 1040 7 580 361 40 7 chr5 130283619 130283921 -72801611 + LTR16B LTR ERVL 78 389 -75 1969 305 52 14 chr5 130284612 130285329 -72800203 + HERV16 LTR ERVL 729 1472 -3524 3119 319 62 37 chr5 130285421 130287410 -72798122 + HERV16 LTR ERVL 1697 3549 -1447 2127 216 47 28 chr5 130287410 130287920 -72797612 + MLT2B1 LTR ERVL 1 520 0 3119 319 62 37 chr5 130287920 130288155 -72797377 + HERV16 LTR ERVL 3549 3777 -1219 589 325 91 39 chr5 130288179 130288665 -72796867 + HERV16 LTR ERVL 4108 4618 -867 794 218 127 0 chr5 130289469 130289666 -72795866 - MER58A DNA MER1_type -1 223 2 659 351 41 14 chr5 130289673 130290038 -72795494 + LTR16B LTR ERVL 14 388 -76 182 37 37 0 chr5 130290461 130290488 -72795044 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 400 211 16 16 chr5 130291163 130291267 -72794265 - MER5A DNA MER1_type -82 107 4 420 250 127 72 chr5 130291303 130291385 -72794147 + MLT1L LTR MaLR 168 244 -371 3555 124 13 4 chr5 130291385 130291907 -72793625 - MER1A DNA MER1_type 0 527 1 420 250 127 72 chr5 130291907 130292100 -72793432 + MLT1L LTR MaLR 244 458 -157 322 300 39 23 chr5 130292270 130292400 -72793132 + MIR SINE MIR 116 247 -15 931 294 36 12 chr5 130292418 130292751 -72792781 - L3 LINE CR1 -101 1476 1136 271 310 69 0 chr5 130292994 130293110 -72792422 - MER94 DNA DNA -10 124 1 952 220 10 0 chr5 130293847 130294047 -72791485 + AluSg/x SINE Alu 105 306 -4 252 0 0 0 chr5 130294080 130294108 -72791424 + (A)n Simple_repeat Simple_repeat 1 28 0 1849 95 19 11 chr5 130295054 130295316 -72790216 + AluSc SINE Alu 1 264 -45 24 0 0 0 chr5 130295554 130295578 -72789954 + AT_rich Low_complexity Low_complexity 1 24 0 1985 147 52 43 chr5 130295608 130295932 -72789600 - THE1C LTR MaLR 0 375 46 465 59 132 0 chr5 130295932 130296000 -72789532 + MADE1 DNA Mariner 4 80 0 1985 147 52 43 chr5 130296000 130296043 -72789489 - THE1C LTR MaLR -329 46 5 22 0 0 0 chr5 130296638 130296660 -72788872 + AT_rich Low_complexity Low_complexity 1 22 0 292 164 14 14 chr5 130296861 130296934 -72788598 + (TG)n Simple_repeat Simple_repeat 2 74 0 226 358 12 0 chr5 130297079 130297160 -72788372 - L2 LINE L2 0 3272 3191 279 383 152 15 chr5 130297416 130297805 -72787727 - L2 LINE L2 -434 2880 2439 26 0 0 0 chr5 130297979 130298005 -72787527 + AT_rich Low_complexity Low_complexity 1 26 0 214 379 82 6 chr5 130298179 130298361 -72787171 + MIR3 SINE MIR 10 205 -3 249 192 55 41 chr5 130298793 130298866 -72786666 - MLT1J LTR MaLR 0 511 438 573 285 66 52 chr5 130298983 130299271 -72786261 - MLT1J LTR MaLR -215 296 5 225 0 0 0 chr5 130299312 130299337 -72786195 + (TA)n Simple_repeat Simple_repeat 1 25 0 281 68 23 0 chr5 130299338 130299382 -72786150 + (CA)n Simple_repeat Simple_repeat 2 46 0 1477 98 8 66 chr5 130299597 130299841 -72785691 + MER30 DNA MER1_type 1 230 0 2483 63 6 9 chr5 130301717 130302050 -72783482 - L1PA6 LINE L1 -15 6139 5808 219 204 0 0 chr5 130302083 130302132 -72783400 + MIR SINE MIR 150 198 -64 24 32 0 0 chr5 130302680 130302711 -72782821 + AT_rich Low_complexity Low_complexity 1 31 0 397 336 38 38 chr5 130302985 130303357 -72782175 - L1MC4a LINE L1 -1923 5885 5514 274 266 13 13 chr5 130304395 130304474 -72781058 + L3 LINE CR1 817 895 -682 808 326 74 31 chr5 130304534 130304991 -72780541 + L3 LINE CR1 1031 1507 -70 1992 129 17 3 chr5 130305136 130305423 -72780109 - AluSq SINE Alu -22 291 1 2136 161 57 5 chr5 130305578 130305981 -72779551 + MSTA LTR MaLR 1 424 -4 7241 191 38 4 chr5 130305985 130307367 -72778165 + MSTA-int LTR MaLR 1 1377 -203 1839 197 40 5 chr5 130307369 130307749 -72777783 + LTR60 LTR ERV1 4 396 -190 867 138 11 43 chr5 130307866 130308054 -72777478 + LTR60 LTR ERV1 405 586 0 1254 126 22 30 chr5 130308177 130308407 -72777125 + MSTA-int LTR MaLR 1347 1574 -6 2200 174 46 14 chr5 130308413 130308827 -72776705 + MSTA LTR MaLR 2 428 0 3027 223 20 9 chr5 130309503 130310149 -72775383 - MER82 DNA MER2_type 0 653 1 212 333 14 0 chr5 130310380 130310452 -72775080 + GA-rich Low_complexity Low_complexity 3 75 0 186 208 0 0 chr5 130312832 130312880 -72772652 + (ATG)n Simple_repeat Simple_repeat 1 48 0 330 347 96 9 chr5 130312885 130313104 -72772428 - MIR SINE MIR -8 254 17 474 235 170 20 chr5 130313218 130313371 -72772161 - MER5A DNA MER1_type -6 183 8 210 338 14 14 chr5 130313555 130313629 -72771903 - MIR SINE MIR -103 105 32 21 0 0 0 chr5 130314234 130314255 -72771277 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 130315223 130315249 -72770283 + AT_rich Low_complexity Low_complexity 1 26 0 1938 127 35 0 chr5 130315335 130315619 -72769913 - AluSg SINE Alu -16 294 1 332 319 62 22 chr5 130316084 130316310 -72769222 - L1MC4a LINE L1 -1907 5901 5667 1951 126 14 3 chr5 130316316 130316610 -72768922 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr5 130316611 130316635 -72768897 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 130316695 130316716 -72768816 + AT_rich Low_complexity Low_complexity 1 21 0 679 251 157 49 chr5 130317027 130317620 -72767912 - HAL1b LINE L1 -302 1046 390 733 286 61 28 chr5 130317676 130317904 -72767628 + L1MC4a LINE L1 5665 5913 -1895 1077 209 93 54 chr5 130317904 130318291 -72767241 - MER57A LTR ERV1 0 403 2 733 286 61 28 chr5 130318291 130318453 -72767079 + L1MC4a LINE L1 5913 6068 -1740 47 44 0 0 chr5 130318473 130318541 -72766991 + AT_rich Low_complexity Low_complexity 1 68 0 1074 181 68 110 chr5 130319625 130319935 -72765597 - AluJb SINE Alu -5 297 1 763 235 61 0 chr5 130321825 130322021 -72763511 - MER3 DNA MER1_type 0 209 2 24 32 0 0 chr5 130322096 130322127 -72763405 + AT_rich Low_complexity Low_complexity 1 31 0 1369 202 12 12 chr5 130322575 130322832 -72762700 + AluJo SINE Alu 30 286 -26 21 0 0 0 chr5 130322926 130322947 -72762585 + AT_rich Low_complexity Low_complexity 1 21 0 415 359 114 29 chr5 130323128 130323443 -72762089 - HAL1 LINE L1 -657 1850 1509 24 0 0 0 chr5 130324561 130324585 -72760947 + AT_rich Low_complexity Low_complexity 1 24 0 306 246 0 0 chr5 130324676 130324741 -72760791 - MIR SINE MIR -92 116 52 431 341 63 37 chr5 130325541 130325999 -72759533 + L1MC4a LINE L1 5454 5806 -356 23 0 0 0 chr5 130326244 130326267 -72759265 + AT_rich Low_complexity Low_complexity 1 23 0 615 281 122 5 chr5 130326756 130326977 -72758555 + MIR SINE MIR 3 249 -13 2050 117 7 0 chr5 130326977 130327282 -72758250 - AluSp SINE Alu 0 307 1 22 35 0 0 chr5 130328781 130328810 -72756722 + AT_rich Low_complexity Low_complexity 1 29 0 26 64 0 0 chr5 130329267 130329314 -72756218 + AT_rich Low_complexity Low_complexity 1 47 0 394 295 133 53 chr5 130330145 130330432 -72755100 - L1MEd LINE L1 -4593 1803 1540 2006 155 0 0 chr5 130330432 130330742 -72754790 - AluSx SINE Alu -2 310 1 394 295 133 53 chr5 130330742 130331189 -72754343 - L1MEd LINE L1 -4856 1540 1010 391 191 53 21 chr5 130332169 130332263 -72753269 + ERVL LTR ERVL 3393 3489 -2275 316 303 37 12 chr5 130332266 130332589 -72752943 + L1ME3 LINE L1 3129 3459 -2687 473 286 68 5 chr5 130332911 130333103 -72752429 + MER112 DNA MER1_type 47 250 -10 318 293 43 10 chr5 130333106 130333314 -72752218 + L1ME3 LINE L1 5648 5862 -300 2512 55 7 3 chr5 130333578 130333888 -72751644 + AluY SINE Alu 1 311 0 388 309 79 17 chr5 130333974 130334152 -72751380 + ERVL LTR ERVL 422 610 -5154 26 50 0 0 chr5 130334557 130334597 -72750935 + AT_rich Low_complexity Low_complexity 1 40 0 1956 104 6 57 chr5 130334983 130335300 -72750232 + AluSx SINE Alu 1 301 -11 294 345 31 62 chr5 130336284 130336478 -72749054 + L2 LINE L2 3117 3304 -9 654 268 88 0 chr5 130336481 130336686 -72748846 - MER58A DNA MER1_type -1 223 1 28 0 0 0 chr5 130337071 130337099 -72748433 + AT_rich Low_complexity Low_complexity 1 28 0 205 265 0 0 chr5 130338112 130338161 -72747371 + (TG)n Simple_repeat Simple_repeat 2 50 0 2555 243 50 18 chr5 130338435 130339221 -72746311 - MER97a DNA MER1_type? -44 850 40 4062 154 21 7 chr5 130341636 130342337 -72743195 + MER50 LTR ERV1 1 711 -23 398 296 118 36 chr5 130342647 130342867 -72742665 - MIR SINE MIR -14 248 11 21 0 0 0 chr5 130343232 130343253 -72742279 + AT_rich Low_complexity Low_complexity 1 21 0 316 316 36 36 chr5 130343559 130343698 -72741834 - L1MC4a LINE L1 -1856 5952 5814 2140 92 73 0 chr5 130343729 130344056 -72741476 - L1PA10 LINE L1 -6 6162 5812 322 308 82 0 chr5 130344253 130344412 -72741120 - L1MC4a LINE L1 -535 5586 5415 1232 236 61 61 chr5 130344720 130345182 -72740350 - MLT1C LTR MaLR 0 467 6 549 158 50 10 chr5 130345241 130345342 -72740190 - MER5A DNA MER1_type -1 188 84 1801 190 52 3 chr5 130345377 130345741 -72739791 + MLT1B LTR MaLR 5 386 -4 1764 164 55 30 chr5 130345841 130346207 -72739325 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 130346253 130346274 -72739258 + AT_rich Low_complexity Low_complexity 1 21 0 243 256 42 48 chr5 130346561 130346729 -72738803 - L1MC4a LINE L1 -1611 4535 4369 302 298 182 10 chr5 130346922 130347120 -72738412 - LTR67 LTR ERVL 0 557 326 225 314 32 45 chr5 130347554 130347774 -72737758 - L1MC4a LINE L1 -2168 3978 3762 617 176 9 0 chr5 130348228 130348336 -72737196 + FLAM_A SINE Alu 21 129 -13 251 276 106 8 chr5 130348541 130348664 -72736868 - L1MC4a LINE L1 -3142 3004 2870 38 68 0 0 chr5 130348867 130348940 -72736592 + AT_rich Low_complexity Low_complexity 1 73 0 315 286 163 15 chr5 130349048 130349244 -72736288 - L1MC4a LINE L1 -3660 2486 2262 2178 110 3 7 chr5 130349542 130349852 -72735680 - AluSc SINE Alu 0 309 1 339 288 123 80 chr5 130349880 130350407 -72735125 - HAL1b LINE L1 -673 675 126 2142 107 40 0 chr5 130353250 130353549 -72731983 - AluSx SINE Alu 0 312 2 246 345 78 0 chr5 130353970 130354086 -72731446 + L2 LINE L2 3189 3313 0 186 43 0 0 chr5 130354325 130354348 -72731184 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 262 364 21 14 chr5 130354818 130354958 -72730574 + MER5A DNA MER1_type 1 141 -48 228 293 37 12 chr5 130355055 130355137 -72730395 - L2 LINE L2 0 3313 3230 459 313 24 24 chr5 130356954 130357120 -72728412 - MIR3 SINE MIR -6 202 37 26 30 0 0 chr5 130357529 130357562 -72727970 + AT_rich Low_complexity Low_complexity 1 33 0 5907 128 15 54 chr5 130357983 130358845 -72726687 - L1PA13 LINE L1 0 6163 5373 3265 108 43 2 chr5 130358845 130359338 -72726194 - L1PA10 LINE L1 -5 6163 5651 5907 128 15 54 chr5 130359338 130360234 -72725298 - L1PA13 LINE L1 -790 5373 4444 338 353 23 40 chr5 130360260 130360433 -72725099 - MIR SINE MIR -63 145 19 273 304 20 47 chr5 130360897 130361045 -72724487 + LTR16C LTR ERVL 346 489 -2 21 57 0 0 chr5 130361899 130361934 -72723598 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 130366308 130366329 -72719203 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 130366403 130366431 -72719101 + AT_rich Low_complexity Low_complexity 1 28 0 434 276 51 69 chr5 130367912 130368129 -72717403 + MLT1K LTR MaLR 376 588 0 260 286 48 12 chr5 130369622 130369706 -72715826 - MIR3 SINE MIR -43 165 79 6080 120 90 99 chr5 130369800 130371664 -72713868 + pTR5 LTR ERV1 743 2438 0 21 0 0 0 chr5 130372330 130372351 -72713181 + AT_rich Low_complexity Low_complexity 1 21 0 322 248 157 20 chr5 130373396 130373549 -72711983 + MIR SINE MIR 87 260 -2 589 239 74 1 chr5 130373583 130373759 -72711773 - MER58A DNA MER1_type 0 224 13 2396 42 0 3 chr5 130374006 130374329 -72711203 - AluY SINE Alu 0 322 1 332 277 0 21 chr5 130375006 130375100 -72710432 + L1ME LINE L1 5532 5623 -498 1899 181 162 21 chr5 130375126 130375611 -72709921 - MER101B LTR ERV1 -30 502 1 207 283 0 17 chr5 130375664 130375724 -72709808 + GA-rich Low_complexity Low_complexity 3 61 0 27 81 0 0 chr5 130375871 130375933 -72709599 + AT_rich Low_complexity Low_complexity 1 62 0 207 0 0 0 chr5 130376274 130376297 -72709235 + (TAA)n Simple_repeat Simple_repeat 1 23 0 305 224 65 9 chr5 130376318 130376425 -72709107 - L1ME4a LINE L1 -48 6073 5961 301 257 18 0 chr5 130376889 130376998 -72708534 + GA-rich Low_complexity Low_complexity 2 112 0 243 320 58 32 chr5 130377063 130377219 -72708313 + MER5B DNA MER1_type 2 161 -17 324 0 0 0 chr5 130377316 130377352 -72708180 + (CA)n Simple_repeat Simple_repeat 2 37 0 830 218 68 68 chr5 130377379 130377645 -72707887 + MER65B LTR ERV1 196 531 0 195 184 0 0 chr5 130377853 130377891 -72707641 + GA-rich Low_complexity Low_complexity 3 40 0 219 152 0 0 chr5 130378277 130378323 -72707209 + GA-rich Low_complexity Low_complexity 2 47 0 24 32 0 0 chr5 130378761 130378792 -72706740 + AT_rich Low_complexity Low_complexity 1 31 0 630 371 152 24 chr5 130379651 130380449 -72705083 + L3 LINE CR1 29 928 -649 229 295 93 27 chr5 130380689 130380839 -72704693 - MIR SINE MIR -63 145 5 204 308 58 62 chr5 130380880 130381088 -72704444 + L3 LINE CR1 1097 1303 -274 705 282 81 34 chr5 130381107 130381430 -72704102 - L2 LINE L2 -70 3243 2906 1965 138 15 49 chr5 130381638 130382045 -72703487 - L1MA8 LINE L1 -6 6285 5893 236 348 78 17 chr5 130382257 130382372 -72703160 + MIR SINE MIR 20 141 -67 1106 186 45 0 chr5 130382993 130383192 -72702340 + AluJo SINE Alu 87 294 -18 21 36 0 0 chr5 130383647 130383675 -72701857 + AT_rich Low_complexity Low_complexity 1 28 0 2686 146 20 11 chr5 130384261 130384712 -72700820 - Tigger2 DNA MER2_type 0 2718 2264 319 275 0 0 chr5 130384692 130384761 -72700771 - Tigger2 DNA MER2_type -2649 69 1 * 25 51 0 0 chr5 130385859 130385898 -72699634 + AT_rich Low_complexity Low_complexity 1 39 0 347 364 31 26 chr5 130386639 130386834 -72698698 - L2 LINE L2 -212 3060 2865 1519 212 142 75 chr5 130387121 130387720 -72697812 - LTR48B LTR ERV1 -5 639 1 517 225 13 0 chr5 130387868 130388019 -72697513 + GA-rich Low_complexity Low_complexity 2 154 0 23 33 0 0 chr5 130388235 130388265 -72697267 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr5 130388338 130388359 -72697173 + (T)n Simple_repeat Simple_repeat 1 21 0 524 260 35 52 chr5 130388775 130388948 -72696584 - MIR SINE MIR -16 246 77 2106 158 32 61 chr5 130389220 130389844 -72695688 + LTR48B LTR ERV1 1 707 0 25 0 0 0 chr5 130390935 130390960 -72694572 + AT_rich Low_complexity Low_complexity 1 25 0 266 213 25 33 chr5 130391665 130391787 -72693745 + (TAA)n Simple_repeat Simple_repeat 3 123 0 280 188 31 104 chr5 130395217 130395313 -72690219 + MIR SINE MIR 17 105 -157 245 289 256 16 chr5 130395526 130395647 -72689885 + MIR SINE MIR 16 165 -97 397 235 10 0 chr5 130396091 130396189 -72689343 + L1MC4a LINE L1 7086 7184 -624 356 125 45 197 chr5 130397607 130397807 -72687725 + L1MC3 LINE L1 6863 7062 -723 5218 117 9 13 chr5 130447861 130448640 -72636892 + THE1B-int LTR MaLR 805 1580 0 2175 147 25 0 chr5 130448640 130448995 -72636537 + THE1B LTR MaLR 1 364 0 280 119 0 51 chr5 130449108 130449167 -72636365 - L1M4 LINE L1 -970 5245 5190 1145 174 28 36 chr5 130449318 130449565 -72635967 + AluSx SINE Alu 31 275 -37 246 32 0 0 chr5 130449570 130449601 -72635931 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2621 256 84 115 chr5 130449628 130450044 -72635488 - L1MEc LINE L1 -1052 5163 4736 2089 142 0 0 chr5 130450044 130450347 -72635185 - AluSg SINE Alu -7 303 1 2621 256 84 115 chr5 130450347 130451797 -72633735 - L1MEc LINE L1 -1479 4736 3243 878 246 70 0 chr5 130451797 130451996 -72633536 + MER58A DNA MER1_type 11 223 -1 2621 256 84 115 chr5 130451996 130453012 -72632520 - L1MEc LINE L1 -2972 3243 2233 701 176 0 8 chr5 130453012 130453137 -72632395 - FLAM_C SINE Alu -9 124 1 2621 256 84 115 chr5 130453137 130453484 -72632048 - L1MEc LINE L1 -3982 2233 1877 183 310 52 0 chr5 130453919 130453977 -72631555 - MIR SINE MIR -73 189 129 21 36 0 0 chr5 130454673 130454701 -72630831 + AT_rich Low_complexity Low_complexity 1 28 0 2382 116 28 6 chr5 130456802 130457157 -72628375 + THE1B LTR MaLR 1 363 -1 23 54 0 0 chr5 130458003 130458040 -72627492 + AT_rich Low_complexity Low_complexity 1 37 0 3895 120 26 73 chr5 130458050 130458774 -72626758 - LTR8 LTR ERV1 -1 690 1 201 290 37 37 chr5 130458803 130458910 -72626622 - MIR SINE MIR -83 179 73 283 247 10 41 chr5 130460039 130460080 -72625452 + CT-rich Low_complexity Low_complexity 4 45 -52 2028 143 51 28 chr5 130460080 130460436 -72625096 + THE1B LTR MaLR 1 364 0 283 247 10 41 chr5 130460436 130460491 -72625041 + CT-rich Low_complexity Low_complexity 45 97 0 2036 153 0 3 chr5 130460857 130461170 -72624362 + AluSx SINE Alu 1 312 0 4164 164 32 1 chr5 130461332 130462022 -72623510 - MER50 LTR ERV1 -23 711 1 183 42 0 0 chr5 130462294 130462318 -72623214 + (TAA)n Simple_repeat Simple_repeat 1 24 0 197 355 246 9 chr5 130463342 130463452 -72622080 - L2 LINE L2 0 3272 3137 29 0 0 0 chr5 130463768 130463797 -72621735 + AT_rich Low_complexity Low_complexity 1 29 0 1344 195 34 86 chr5 130463826 130464211 -72621321 + MLT1A1 LTR MaLR 1 365 0 6235 195 179 25 chr5 130464460 130465876 -72619656 + MER52A LTR ERV1 1 1634 -121 2227 232 49 105 chr5 130465945 130466810 -72618722 + L1M4 LINE L1 25 840 -5702 2650 139 9 19 chr5 130468363 130468795 -72616737 + MSTA LTR MaLR 1 428 0 203 239 22 0 chr5 130469018 130469064 -72616468 - MIR SINE MIR -56 206 160 1953 118 0 45 chr5 130470866 130471180 -72614352 - AluSc SINE Alu -9 300 1 202 283 0 0 chr5 130471452 130471498 -72614034 + L2 LINE L2 3218 3263 -9 383 277 223 20 chr5 130471741 130471943 -72613589 + L3b LINE CR1 1249 1491 -92 435 299 66 19 chr5 130477468 130477846 -72607686 - L1MC5 LINE L1 -61 7900 7505 * 1021 179 68 28 chr5 130477839 130478090 -72607442 - L1MC3 LINE L1 0 7785 7525 885 221 16 35 chr5 130478091 130478349 -72607183 - L1MCa LINE L1 -5110 1454 1202 2082 141 0 0 chr5 130478366 130478663 -72606869 - AluSx SINE Alu -13 299 3 1240 250 100 98 chr5 130478677 130479789 -72605743 - L1MCa LINE L1 -4922 1123 10 1836 225 89 80 chr5 130479811 130480691 -72604841 - L1MC5 LINE L1 -438 7523 6636 255 61 0 0 chr5 130480709 130480742 -72604790 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2141 169 3 5 chr5 130480769 130481136 -72604396 - MER47A DNA MER2_type 0 366 1 229 281 9 9 chr5 130481137 130481251 -72604281 + (TA)n Simple_repeat Simple_repeat 1 114 0 333 324 94 48 chr5 130481777 130482471 -72603061 - HAL1b LINE L1 -524 824 99 24 0 0 0 chr5 130482680 130482704 -72602828 + AT_rich Low_complexity Low_complexity 1 24 0 2225 69 41 0 chr5 130482897 130483188 -72602344 - AluY SINE Alu -6 305 3 364 298 137 19 chr5 130483243 130483415 -72602117 + MIR SINE MIR 34 224 -38 207 332 45 20 chr5 130484409 130484510 -72601022 + MIR SINE MIR 64 169 -39 4865 81 25 26 chr5 130485587 130486276 -72599256 - LTR12 LTR ERV1 0 688 1 23 0 0 0 chr5 130486451 130486474 -72599058 + AT_rich Low_complexity Low_complexity 1 23 0 1931 136 7 10 chr5 130486474 130486769 -72598763 - AluSx SINE Alu -18 294 1 5430 112 7 27 chr5 130486769 130487645 -72597887 - L1PA13 LINE L1 -11 6152 5295 318 106 0 0 chr5 130487749 130487796 -72597736 + (TA)n Simple_repeat Simple_repeat 1 47 0 2075 135 0 3 chr5 130487853 130488164 -72597368 - AluSg SINE Alu 0 310 1 189 0 0 0 chr5 130488206 130488227 -72597305 + (TG)n Simple_repeat Simple_repeat 2 22 0 758 259 65 7 chr5 130488618 130489016 -72596516 - Charlie1b DNA MER1_type -20 503 2 266 246 46 0 chr5 130489141 130489206 -72596326 + MIR3 SINE MIR 138 205 -3 439 234 75 9 chr5 130489603 130489710 -72595822 + L2 LINE L2 3192 3305 -8 25 0 0 0 chr5 130489872 130489897 -72595635 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 130493348 130493372 -72592160 + AT_rich Low_complexity Low_complexity 1 24 0 418 283 85 99 chr5 130493519 130493932 -72591600 + MLT1I LTR MaLR 1 407 -2 933 323 107 27 chr5 130494217 130494843 -72590689 - L2 LINE L2 -771 2543 1868 21 71 0 0 chr5 130497434 130497476 -72588056 + AT_rich Low_complexity Low_complexity 1 42 0 4095 219 34 15 chr5 130497925 130499446 -72586086 - L1MB3 LINE L1 -2 6417 4870 310 134 98 0 chr5 130499451 130499533 -72585999 - L1MB3 LINE L1 -1661 4721 4632 * 358 296 19 19 chr5 130499524 130499586 -72585946 - L1MB3 LINE L1 -2630 3752 3691 1472 214 7 7 chr5 130499586 130499881 -72585651 - AluJo SINE Alu -17 295 1 358 296 19 19 chr5 130499881 130499980 -72585552 - L1MB3 LINE L1 -2690 3692 3591 * 5013 194 46 14 chr5 130499964 130501114 -72584418 - L1MB3 LINE L1 -4549 1835 649 1537 266 159 35 chr5 130501142 130502380 -72583152 - L1M4 LINE L1 -2285 4097 2707 321 345 70 12 chr5 130502386 130502557 -72582975 - L1M4 LINE L1 -4732 1652 1472 1913 136 14 0 chr5 130502794 130503080 -72582452 + AluSx SINE Alu 1 290 -22 414 288 8 0 chr5 130503082 130503214 -72582318 + MIR SINE MIR 118 250 -12 485 212 45 15 chr5 130503254 130503386 -72582146 + LTR41 LTR ERVL 3 138 -635 285 179 51 26 chr5 130503701 130503779 -72581753 + LTR50 LTR ERVL 713 792 -3 519 299 25 30 chr5 130504131 130504332 -72581200 + LTR33 LTR ERVL 315 514 -7 713 230 6 19 chr5 130504791 130504952 -72580580 - FRAM SINE Alu -7 159 1 598 249 150 79 chr5 130504953 130505486 -72580046 - L1MC/D LINE L1 -1984 5824 5254 375 301 105 78 chr5 130505609 130506058 -72579474 - L1MC/D LINE L1 -1021 5125 4665 217 330 27 54 chr5 130506783 130506895 -72578637 + L2 LINE L2 2736 2844 -470 24 0 0 0 chr5 130506989 130507013 -72578519 + AT_rich Low_complexity Low_complexity 1 24 0 541 318 54 25 chr5 130507124 130507363 -72578169 + MIR SINE MIR 2 247 -15 194 372 47 16 chr5 130507505 130507634 -72577898 - L2 LINE L2 -1 3312 3180 386 386 126 31 chr5 130507858 130508278 -72577254 + L2 LINE L2 2809 3268 -4 1626 263 61 6 chr5 130508653 130509143 -72576389 + L1MB7 LINE L1 5658 6174 -10 531 232 19 52 chr5 130509155 130509351 -72576181 + L1ME LINE L1 5512 5699 -422 640 306 36 42 chr5 130509635 130509968 -72575564 + MLT1J LTR MaLR 72 402 -109 3043 171 18 28 chr5 130510000 130510609 -72574923 + MER6A DNA MER2_type 3 605 0 2229 119 0 0 chr5 130510887 130511199 -72574333 - AluSx SINE Alu 0 312 1 183 333 0 18 chr5 130511560 130511617 -72573915 + L3 LINE CR1 1386 1441 -136 330 311 34 47 chr5 130514782 130514930 -72570602 - MIR SINE MIR 0 262 117 198 374 71 0 chr5 130515038 130515137 -72570395 - MIR SINE MIR -72 136 31 2439 155 16 5 chr5 130515930 130516355 -72569177 + MSTB1 LTR MaLR 1 430 -2 22 0 0 0 chr5 130517029 130517051 -72568481 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 130517084 130517112 -72568420 + AT_rich Low_complexity Low_complexity 1 28 0 467 250 117 26 chr5 130517305 130517569 -72567963 - L1ME3A LINE L1 -219 5934 5647 299 214 14 0 chr5 130517647 130517717 -72567815 - L1ME3A LINE L1 -1593 4536 4466 1074 206 0 31 chr5 130517718 130517946 -72567586 - AluJo SINE Alu -6 306 86 374 275 85 66 chr5 130518039 130518426 -72567106 - L1ME3A LINE L1 -5007 1112 709 2063 87 0 17 chr5 130518426 130518738 -72566794 - AluY SINE Alu 0 307 1 374 275 85 66 chr5 130518738 130518890 -72566642 - L1ME3A LINE L1 -5410 709 561 21 36 0 0 chr5 130521489 130521517 -72564015 + AT_rich Low_complexity Low_complexity 1 28 0 824 268 73 16 chr5 130521519 130521945 -72563587 - L1MCc LINE L1 -2873 4068 3619 201 78 20 39 chr5 130521947 130521998 -72563534 + (TA)n Simple_repeat Simple_repeat 1 50 0 694 263 5 0 chr5 130521998 130522184 -72563348 - L1MCc LINE L1 -3322 3619 3433 1612 258 122 69 chr5 130522188 130523901 -72561631 - L1MCc LINE L1 -3897 3225 1207 1039 294 15 81 chr5 130524311 130524845 -72560687 - L1MCc LINE L1 -5908 515 17 22 70 0 0 chr5 130525275 130525318 -72560214 + AT_rich Low_complexity Low_complexity 1 43 0 224 300 90 20 chr5 130525607 130525707 -72559825 + MIR3 SINE MIR 83 189 -19 243 0 0 0 chr5 130528634 130528661 -72556871 + (T)n Simple_repeat Simple_repeat 1 27 0 284 289 33 0 chr5 130528811 130528901 -72556631 + GA-rich Low_complexity Low_complexity 3 95 0 21 36 0 0 chr5 130529088 130529116 -72556416 + AT_rich Low_complexity Low_complexity 1 28 0 965 115 0 28 chr5 130529373 130529555 -72555977 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 294 125 0 0 chr5 130529562 130529610 -72555922 + (TC)n Simple_repeat Simple_repeat 2 49 0 21 57 0 0 chr5 130529756 130529791 -72555741 + AT_rich Low_complexity Low_complexity 1 35 0 946 212 22 0 chr5 130531108 130531292 -72554240 + MER5A DNA MER1_type 1 188 -1 29 70 0 0 chr5 130531922 130531979 -72553553 + AT_rich Low_complexity Low_complexity 1 57 0 5130 173 25 1 chr5 130532099 130533231 -72552301 - L1PB4 LINE L1 -3 6153 5005 881 118 7 18 chr5 130533232 130533382 -72552150 + THE1B LTR MaLR 1 156 -237 1032 299 59 11 chr5 130533382 130533928 -72551604 - L1PA15-16 LINE L1 -5280 923 354 309 282 34 40 chr5 130534173 130534322 -72551210 - L1PA15-16 LINE L1 -6004 200 53 * 406 342 93 33 chr5 130534312 130535035 -72550497 - L1M2 LINE L1 -5257 1952 22 235 319 46 50 chr5 130536339 130536580 -72548952 - L1ME LINE L1 -301 5820 5581 25 0 0 0 chr5 130536699 130536724 -72548808 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 130536930 130536952 -72548580 + AT_rich Low_complexity Low_complexity 1 22 0 1265 327 97 41 chr5 130536999 130538146 -72547386 + L2 LINE L2 2100 3313 0 1032 286 133 28 chr5 130538250 130539048 -72546484 - L1MC4a LINE L1 -1620 6188 5307 273 219 172 0 chr5 130539049 130539113 -72546419 - L2 LINE L2 0 3313 3239 189 107 0 0 chr5 130539377 130539405 -72546127 + (TTC)n Simple_repeat Simple_repeat 2 29 0 21 82 0 0 chr5 130540996 130541045 -72544487 + AT_rich Low_complexity Low_complexity 1 49 0 21 82 0 0 chr5 130541687 130541736 -72543796 + AT_rich Low_complexity Low_complexity 1 49 0 7163 165 37 13 chr5 130543413 130544871 -72540661 - L1MA4 LINE L1 -6 6294 4750 189 74 0 0 chr5 130544871 130544898 -72540634 + (TG)n Simple_repeat Simple_repeat 2 28 0 7163 165 37 13 chr5 130544898 130545749 -72539783 - L1MA4 LINE L1 -1550 4750 3921 282 179 0 0 chr5 130546112 130546168 -72539364 + (TA)n Simple_repeat Simple_repeat 2 57 0 227 284 29 10 chr5 130546168 130546270 -72539262 + L1MC4 LINE L1 6600 6703 -1339 227 191 29 15 chr5 130546270 130546338 -72539194 + L1MCa LINE L1 1995 2063 -4363 208 200 22 0 chr5 130546339 130546384 -72539148 + (TA)n Simple_repeat Simple_repeat 1 46 0 1009 305 88 0 chr5 130546675 130547003 -72538529 - L3b LINE CR1 -113 1470 1114 228 229 0 0 chr5 130548285 130548333 -72537199 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 595 250 47 29 chr5 130548533 130548705 -72536827 - MLT1E3 LTR MaLR -404 220 46 324 297 93 0 chr5 130549130 130549248 -72536284 - MIR SINE MIR -131 131 3 378 204 0 11 chr5 130550006 130550099 -72535433 - L1MB8 LINE L1 -2 6176 6085 804 214 33 0 chr5 130550112 130550294 -72535238 - L1M4 LINE L1 -788 5358 5171 271 285 125 56 chr5 130552415 130552559 -72532973 + MIR SINE MIR 1 154 -108 203 294 0 0 chr5 130555228 130555279 -72530253 - L2 LINE L2 -5 3308 3258 12963 157 33 8 chr5 130555599 130557958 -72527574 + Tigger1 DNA MER2_type 2 2418 0 24 53 0 0 chr5 130557983 130558021 -72527511 + AT_rich Low_complexity Low_complexity 1 38 0 21 71 0 0 chr5 130558432 130558474 -72527058 + AT_rich Low_complexity Low_complexity 1 42 0 1456 168 43 56 chr5 130558532 130558902 -72526630 + L1MB4 LINE L1 5116 5477 -703 2023 111 28 0 chr5 130558902 130559190 -72526342 + AluSx SINE Alu 1 296 -16 1456 168 43 56 chr5 130559190 130559313 -72526219 + L1MB4 LINE L1 5477 5600 -580 1588 174 57 8 chr5 130559313 130559656 -72525876 + MLT1A1 LTR MaLR 1 364 -1 2636 192 22 12 chr5 130559656 130560234 -72525298 + L1MB4 LINE L1 5595 6178 -2 764 229 43 26 chr5 130560390 130560621 -72524911 - MIR SINE MIR -14 248 14 320 326 0 0 chr5 130561056 130561142 -72524390 + L2 LINE L2 3186 3271 -1 367 293 41 48 chr5 130561493 130561640 -72523892 + MER96 DNA MER1_type? 1 146 -29 327 338 45 90 chr5 130562620 130562954 -72522578 + L2 LINE L2 2946 3264 -8 239 316 13 13 chr5 130563015 130563094 -72522438 + L2 LINE L2 3194 3272 0 2301 74 0 3 chr5 130563510 130563795 -72521737 + AluSp SINE Alu 21 304 -9 381 297 40 7 chr5 130564403 130564551 -72520981 + Charlie8 DNA MER1_type 14 166 -2251 408 167 0 14 chr5 130564651 130564723 -72520809 - FRAM SINE Alu -75 101 31 592 311 89 39 chr5 130564962 130565411 -72520121 + LTR33 LTR ERVL 17 519 -2 324 332 181 5 chr5 130566155 130566348 -72519184 + MIR SINE MIR 30 256 -6 223 319 14 116 chr5 130566432 130566469 -72519063 + MIR SINE MIR 1 40 -222 2149 84 0 18 chr5 130566469 130566783 -72518749 + AluY SINE Alu 1 309 0 223 319 14 116 chr5 130566783 130566882 -72518650 + MIR SINE MIR 40 124 -138 665 277 13 58 chr5 130566888 130567112 -72518420 + MIR SINE MIR 30 243 -19 192 280 107 0 chr5 130567108 130567183 -72518349 + MIR SINE MIR 119 201 -61 * 235 229 0 0 chr5 130567244 130567292 -72518240 + MIR SINE MIR 205 252 -10 24 0 0 0 chr5 130568312 130568336 -72517196 + AT_rich Low_complexity Low_complexity 1 24 0 372 318 8 0 chr5 130569186 130569315 -72516217 - MARNA DNA Mariner -174 412 283 243 241 11 23 chr5 130569767 130569854 -72515678 + (TA)n Simple_repeat Simple_repeat 2 87 0 32 43 0 0 chr5 130569883 130569929 -72515603 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 130570000 130570029 -72515503 + AT_rich Low_complexity Low_complexity 1 29 0 7625 26 0 0 chr5 130570101 130570994 -72514538 - L1PA3 LINE L1 -2 6153 5261 1465 12 0 0 chr5 130570988 130571156 -72514376 - L1PA3 LINE L1 -1482 4664 4497 * 1922 14 0 0 chr5 130571155 130571374 -72514158 + L1P LINE L1 3950 4168 -1978 470 17 17 0 chr5 130571374 130571433 -72514099 + L1P LINE L1 3920 3979 -2167 1065 270 19 26 chr5 130571526 130571941 -72513591 + L1M4b LINE L1 1227 1638 -5221 21 0 0 0 chr5 130573206 130573227 -72512305 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 130574167 130574197 -72511335 + AT_rich Low_complexity Low_complexity 1 30 0 264 342 26 100 chr5 130574515 130574746 -72510786 + L2 LINE L2 2869 3082 -190 301 231 112 75 chr5 130575651 130575785 -72509747 - L2 LINE L2 -14 3299 3161 21 36 0 0 chr5 130575810 130575838 -72509694 + AT_rich Low_complexity Low_complexity 1 28 0 425 277 34 20 chr5 130577234 130577382 -72508150 - MIR SINE MIR -30 232 83 189 0 0 0 chr5 130577512 130577533 -72507999 + (T)n Simple_repeat Simple_repeat 1 21 0 2621 10 0 17 chr5 130579033 130579334 -72506198 - AluYa5 SINE Alu -15 296 1 607 262 61 12 chr5 130579908 130580072 -72505460 - MER63A DNA MER1_type 0 210 39 1809 89 0 15 chr5 130580138 130580426 -72505106 - AluY SINE Alu 0 340 57 2224 118 0 3 chr5 130581522 130581836 -72503696 + AluSq SINE Alu 1 313 0 21 0 0 0 chr5 130581836 130581857 -72503675 + AT_rich Low_complexity Low_complexity 1 21 0 234 105 0 0 chr5 130581937 130581975 -72503557 + (TC)n Simple_repeat Simple_repeat 1 38 0 29 60 0 0 chr5 130582390 130582440 -72503092 + AT_rich Low_complexity Low_complexity 1 50 0 184 281 61 37 chr5 130583736 130583818 -72501714 + L3 LINE CR1 369 452 -1125 1906 162 0 0 chr5 130584844 130585146 -72500386 - AluSx SINE Alu -10 302 1 605 282 60 0 chr5 130585449 130585733 -72499799 + MER113 DNA MER1_type? 98 398 -123 243 279 135 27 chr5 130585765 130585876 -72499656 + MER113 DNA MER1_type? 392 514 -7 663 239 70 37 chr5 130585981 130586224 -72499308 + L1ME3A LINE L1 5916 6166 -4 1422 208 128 10 chr5 130586307 130586697 -72498835 - MER63B DNA MER1_type 0 436 1 773 225 0 0 chr5 130586745 130586914 -72498618 - L1 LINE L1 -1040 5106 4938 426 243 0 0 chr5 130586920 130587023 -72498509 + L1PB4 LINE L1 6051 6153 -3 1011 242 78 40 chr5 130587073 130587495 -72498037 + L1ME LINE L1 5258 5695 -467 * 3427 198 72 69 chr5 130587467 130588809 -72496723 + L1MA9 LINE L1 2629 3973 -2173 402 176 39 10 chr5 130588825 130588927 -72496605 + L1MA9 LINE L1 4458 4562 -1584 4694 187 39 16 chr5 130588934 130589855 -72495677 + L1MA9 LINE L1 4863 5761 -551 408 20 0 0 chr5 130589855 130589904 -72495628 + (TG)n Simple_repeat Simple_repeat 2 50 0 4694 187 39 16 chr5 130589904 130590253 -72495279 + L1MA9 LINE L1 5761 6168 -144 288 0 0 0 chr5 130590253 130590285 -72495247 + (CA)n Simple_repeat Simple_repeat 1 32 0 4694 187 39 16 chr5 130590285 130590423 -72495109 + L1MA9 LINE L1 6168 6301 -11 356 217 43 0 chr5 130590952 130591044 -72494488 - MER20B DNA MER1_type -167 616 521 1156 287 46 20 chr5 130591158 130591618 -72493914 - MER20B DNA MER1_type -282 501 30 204 388 86 9 chr5 130591660 130591776 -72493756 + MIR SINE MIR 22 146 -116 21 36 0 0 chr5 130593098 130593126 -72492406 + AT_rich Low_complexity Low_complexity 1 28 0 502 222 35 11 chr5 130593491 130593618 -72491914 - L1MDa LINE L1 -4663 1719 1482 297 0 0 0 chr5 130594990 130595023 -72490509 + (T)n Simple_repeat Simple_repeat 1 33 0 808 264 35 53 chr5 130595148 130595375 -72490157 - MIR SINE MIR -38 224 2 191 268 62 62 chr5 130595487 130595599 -72489933 + L2 LINE L2 2376 2487 -827 200 268 223 13 chr5 130595680 130595837 -72489695 - MIR SINE MIR -32 230 41 402 57 0 0 chr5 130596180 130596233 -72489299 + (CA)n Simple_repeat Simple_repeat 1 53 0 2019 212 70 8 chr5 130597501 130597972 -72487560 - MLT1D LTR MaLR -3 502 3 186 371 56 35 chr5 130598039 130598236 -72487296 - L2 LINE L2 -900 2414 2214 744 284 18 14 chr5 130598806 130599028 -72486504 - MER58A DNA MER1_type -1 223 1 696 284 79 75 chr5 130599267 130599620 -72485912 + L1ME2 LINE L1 792 1142 -5421 1565 173 3 21 chr5 130599620 130599904 -72485628 + AluJo SINE Alu 18 296 -16 696 284 79 75 chr5 130599904 130600556 -72484976 + L1ME2 LINE L1 1142 1904 -4659 1747 168 13 7 chr5 130600556 130600859 -72484673 + AluSx SINE Alu 1 305 -7 696 284 79 75 chr5 130600859 130601110 -72484422 + L1ME2 LINE L1 1904 2153 -4410 1639 271 53 49 chr5 130601246 130601531 -72484001 + MLT1E LTR MaLR 3 292 -301 2654 64 6 0 chr5 130601531 130601873 -72483659 + LTR14A LTR ERVK 1 344 0 1639 271 53 49 chr5 130601873 130602093 -72483439 + MLT1E LTR MaLR 292 510 -83 418 165 66 0 chr5 130602093 130602184 -72483348 + L1PA13 LINE L1 6066 6162 -1 1465 281 104 9 chr5 130602184 130602867 -72482665 + L1M4 LINE L1 3377 4124 -2022 1867 239 94 4 chr5 130602920 130603377 -72482155 - MLT1D LTR MaLR 0 505 8 404 199 19 19 chr5 130603378 130603483 -72482049 + L1ME2 LINE L1 4227 4331 -2051 308 232 110 12 chr5 130603609 130603691 -72481841 - MLT1H1 LTR MaLR -465 90 1 1917 244 77 21 chr5 130603700 130604995 -72480537 + L1ME2 LINE L1 4797 6174 -226 1903 235 51 65 chr5 130604992 130605810 -72479722 + L1MD1 LINE L1 2940 3746 -2636 * 430 258 202 4 chr5 130605794 130606199 -72479333 + L1MD1 LINE L1 5896 6352 -48 * 38 0 0 0 chr5 130606213 130606251 -72479281 + AT_rich Low_complexity Low_complexity 1 38 0 42123 37 21 1 chr5 130606251 130612280 -72473252 - L1PA2 LINE L1 -3 6152 4 240 300 118 18 chr5 130612334 130612504 -72473028 + L1MC4 LINE L1 7830 8016 -26 197 139 23 0 chr5 130612501 130612544 -72472988 + (TG)n Simple_repeat Simple_repeat 2 45 0 * 3410 138 78 38 chr5 130612550 130613268 -72472264 - Tigger3(Golem) DNA MER2_type -5 3024 2278 461 250 60 0 chr5 130613259 130613359 -72472173 - Tigger3(Golem) DNA MER2_type -2921 108 3 * 2089 91 50 0 chr5 130614681 130614979 -72470553 + AluSp SINE Alu 1 313 0 194 0 0 37 chr5 130614983 130615010 -72470522 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 276 53 0 0 chr5 130615012 130615050 -72470482 + (TG)n Simple_repeat Simple_repeat 1 38 0 315 195 59 8 chr5 130617629 130617747 -72467785 + (TA)n Simple_repeat Simple_repeat 1 124 0 1054 200 0 20 chr5 130617749 130617949 -72467583 - AluJo SINE Alu -30 282 87 258 56 0 0 chr5 130618980 130619016 -72466516 + (GA)n Simple_repeat Simple_repeat 1 36 0 2965 150 19 4 chr5 130619484 130620185 -72465347 + L1P5 LINE L1 5081 5792 -364 225 197 42 0 chr5 130620188 130620259 -72465273 + (TA)n Simple_repeat Simple_repeat 2 75 0 228 271 0 24 chr5 130620263 130620348 -72465184 - L1MC4 LINE L1 -1343 6699 6617 476 158 13 67 chr5 130620348 130620723 -72464809 + (CATATA)n Simple_repeat Simple_repeat 1 354 0 * 608 204 23 0 chr5 130620680 130620856 -72464676 + (TA)n Simple_repeat Simple_repeat 1 180 0 200 246 14 0 chr5 130620867 130620936 -72464596 + (TA)n Simple_repeat Simple_repeat 2 71 0 305 333 0 0 chr5 130620936 130621026 -72464506 + L1MC4 LINE L1 6614 6703 -1339 * 316 274 48 0 chr5 130620952 130621036 -72464496 - L1MC4 LINE L1 -1339 6703 6616 235 259 47 0 chr5 130621036 130621121 -72464411 - L1MC4 LINE L1 -1339 6703 6615 800 104 0 63 chr5 130621121 130621364 -72464168 + (CATATA)n Simple_repeat Simple_repeat 1 227 0 303 281 0 22 chr5 130621364 130621453 -72464079 + L1MC4 LINE L1 6616 6702 -1340 310 284 23 0 chr5 130621458 130621546 -72463986 - L1MC4 LINE L1 -1338 6704 6615 2074 155 25 6 chr5 130621561 130621916 -72463616 + L1PB4 LINE L1 5782 6143 -13 22 0 0 0 chr5 130621921 130621943 -72463589 + AT_rich Low_complexity Low_complexity 1 22 0 6770 9 1 0 chr5 130622042 130622830 -72462702 + L1PA2 LINE L1 5388 6176 0 7182 40 1 0 chr5 130623509 130624376 -72461156 - L1PA5 LINE L1 -2 6152 5285 28 61 0 0 chr5 130624430 130624479 -72461053 + AT_rich Low_complexity Low_complexity 1 49 0 358 263 0 0 chr5 130626361 130626437 -72459095 + MER63 DNA MER1_type 978 1053 -8 216 298 122 64 chr5 130626830 130627018 -72458514 - L2 LINE L2 -92 3221 3023 677 167 0 23 chr5 130627040 130627172 -72458360 - MLT1D LTR MaLR 0 505 377 277 329 7 20 chr5 130627391 130627537 -72457995 - L1M4 LINE L1 -1988 4158 4015 600 356 61 28 chr5 130627545 130627952 -72457580 - L2 LINE L2 -268 3045 2624 222 37 0 0 chr5 130628110 130628137 -72457395 + (T)n Simple_repeat Simple_repeat 1 27 0 24 67 0 0 chr5 130628630 130628675 -72456857 + AT_rich Low_complexity Low_complexity 1 45 0 241 231 0 19 chr5 130629291 130629343 -72456189 + GA-rich Low_complexity Low_complexity 2 52 0 258 136 0 0 chr5 130629358 130629402 -72456130 + (GAA)n Simple_repeat Simple_repeat 1 44 0 244 171 80 0 chr5 130630309 130630397 -72455135 + (TA)n Simple_repeat Simple_repeat 1 95 0 191 296 113 0 chr5 130630742 130630813 -72454719 - L2 LINE L2 -246 3067 2989 238 246 0 0 chr5 130631468 130631525 -72454007 - MER94 DNA DNA -7 127 71 244 282 0 0 chr5 130631756 130631841 -72453691 - L1MC4 LINE L1 -1343 6699 6615 1686 64 2 1 chr5 130632278 130632523 -72453009 - L1PA4 LINE L1 -174 5987 5745 1636 49 0 0 chr5 130632523 130632723 -72452809 + L1PA4 LINE L1 5948 6152 -3 21 57 0 0 chr5 130632723 130632758 -72452774 + AT_rich Low_complexity Low_complexity 1 35 0 2077 123 0 3 chr5 130632909 130633241 -72452291 + AluSx SINE Alu 1 331 0 21 36 0 0 chr5 130633693 130633721 -72451811 + AT_rich Low_complexity Low_complexity 1 28 0 409 323 116 5 chr5 130634476 130634665 -72450867 + MIR SINE MIR 37 246 -16 21 0 0 0 chr5 130636199 130636220 -72449312 + AT_rich Low_complexity Low_complexity 1 21 0 272 281 11 22 chr5 130636287 130636376 -72449156 - MIR3 SINE MIR -28 180 93 219 139 0 0 chr5 130637996 130638032 -72447500 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 335 23 23 0 chr5 130638272 130638316 -72447216 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr5 130638800 130638821 -72446711 + AT_rich Low_complexity Low_complexity 1 21 0 471 106 71 0 chr5 130640182 130640267 -72445265 + L1PA13 LINE L1 6069 6159 -4 484 300 60 15 chr5 130640352 130640822 -72444710 - L1ME3A LINE L1 -2 6237 5713 523 260 64 23 chr5 130640846 130641019 -72444513 + L1M4 LINE L1 4586 4765 -1381 4378 269 91 50 chr5 130641091 130641243 -72444289 - L1MEc LINE L1 -1204 5011 4867 198 0 0 0 chr5 130641243 130641265 -72444267 + (TA)n Simple_repeat Simple_repeat 2 23 0 4378 269 91 50 chr5 130641265 130643436 -72442096 - L1MEc LINE L1 -1348 4867 2786 2137 105 0 3 chr5 130643436 130643754 -72441778 - AluSq SINE Alu 0 313 1 4378 269 91 50 chr5 130643754 130644019 -72441513 - L1MEc LINE L1 -3429 2786 2533 2329 65 0 0 chr5 130644019 130644348 -72441184 - AluY SINE Alu 0 311 1 4378 269 91 50 chr5 130644348 130644373 -72441159 - L1MEc LINE L1 -3682 2533 2510 351 0 0 0 chr5 130644373 130644412 -72441120 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1903 119 4 4 chr5 130644414 130644692 -72440840 - AluSx SINE Alu -34 278 1 4378 269 91 50 chr5 130644692 130645365 -72440167 - L1MEc LINE L1 -3705 2510 1639 375 268 96 64 chr5 130645368 130645588 -72439944 - L1MEc LINE L1 -4650 1565 1339 29 0 0 0 chr5 130645598 130645627 -72439905 + AT_rich Low_complexity Low_complexity 1 29 0 344 289 53 13 chr5 130645648 130645800 -72439732 - L1MEc LINE L1 -5159 1237 1080 3262 81 4 24 chr5 130645833 130646301 -72439231 + L1PA10 LINE L1 5710 6168 0 300 300 44 0 chr5 130646312 130646402 -72439130 + MLT1D LTR MaLR 263 356 -149 334 399 54 5 chr5 130646417 130646488 -72439044 - L1MEc LINE L1 -4616 1991 1925 1119 208 33 42 chr5 130646488 130646729 -72438803 + MER8 DNA MER2_type 1 239 0 334 399 54 5 chr5 130646729 130646880 -72438652 - L1MEc LINE L1 -4682 1925 1758 314 345 53 18 chr5 130646937 130647108 -72438424 + LTR16A LTR ERVL 76 252 -198 864 357 72 28 chr5 130648222 130649147 -72436385 - HERVL LTR ERVL -825 4829 3864 741 307 124 11 chr5 130649601 130649972 -72435560 + LTR16A LTR ERVL 32 444 -6 37 0 0 0 chr5 130650078 130650115 -72435417 + AT_rich Low_complexity Low_complexity 1 37 0 189 266 31 31 chr5 130650582 130650646 -72434886 + MIR3 SINE MIR 133 196 -12 329 294 136 26 chr5 130650783 130650961 -72434571 - L1MEc LINE L1 -5020 1406 1196 2183 126 0 0 chr5 130650961 130651270 -72434262 - AluSq SINE Alu -4 309 1 329 294 136 26 chr5 130651270 130651319 -72434213 - L1MEc LINE L1 -5230 1196 1154 208 365 0 0 chr5 130654181 130654244 -72431288 - L2 LINE L2 -27 3245 3183 448 381 84 16 chr5 130655012 130655395 -72430137 + L3 LINE CR1 1132 1540 -37 486 326 21 21 chr5 130656399 130656586 -72428946 - MIR3 SINE MIR -3 205 19 2298 70 0 35 chr5 130656849 130657163 -72428369 - AluY SINE Alu -8 303 1 5443 28 2 0 chr5 130657248 130657887 -72427645 + SVA Other Other 757 1396 0 199 403 42 37 chr5 130658998 130659214 -72426318 + L2 LINE L2 2473 2689 -625 548 286 138 18 chr5 130660032 130660249 -72425283 - MIR SINE MIR -1 261 19 276 297 224 24 chr5 130660479 130660644 -72424888 - MIR SINE MIR -45 217 20 1853 132 41 10 chr5 130661826 130662121 -72423411 - AluSx SINE Alu -8 304 1 605 110 10 0 chr5 130662731 130662831 -72422701 + (TC)n Simple_repeat Simple_repeat 2 102 0 376 114 11 125 chr5 130663741 130663798 -72421734 + L1MA8 LINE L1 6052 6097 -194 1748 169 3 10 chr5 130663798 130664099 -72421433 - AluSx SINE Alu -13 299 1 376 114 11 125 chr5 130664099 130664129 -72421403 + L1MA8 LINE L1 6097 6129 -162 * 802 76 0 0 chr5 130664125 130664230 -72421302 - L1PA7 LINE L1 -501 5671 5567 * 3429 78 6 2 chr5 130664227 130664699 -72420833 + L1PA7 LINE L1 5681 6154 0 504 231 62 0 chr5 130664704 130664834 -72420698 + L1MA8 LINE L1 6128 6265 -26 537 135 2 61 chr5 130665082 130665607 -72419925 + (TA)n Simple_repeat Simple_repeat 1 494 0 219 139 0 0 chr5 130667542 130667578 -72417954 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 335 23 23 0 chr5 130667818 130667862 -72417670 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr5 130668346 130668367 -72417165 + AT_rich Low_complexity Low_complexity 1 21 0 471 106 71 0 chr5 130669730 130669815 -72415717 + L1PA13 LINE L1 6069 6159 -4 484 300 60 15 chr5 130669900 130670370 -72415162 - L1ME3A LINE L1 -2 6237 5713 523 260 64 23 chr5 130670394 130670567 -72414965 + L1M4 LINE L1 4586 4765 -1381 4342 270 91 50 chr5 130670639 130670791 -72414741 - L1MEc LINE L1 -1204 5011 4867 198 0 0 0 chr5 130670791 130670813 -72414719 + (TA)n Simple_repeat Simple_repeat 2 23 0 4342 270 91 50 chr5 130670813 130672984 -72412548 - L1MEc LINE L1 -1348 4867 2786 2158 101 0 3 chr5 130672984 130673302 -72412230 - AluSq SINE Alu 0 313 1 4342 270 91 50 chr5 130673302 130673567 -72411965 - L1MEc LINE L1 -3429 2786 2533 2329 65 0 0 chr5 130673567 130673896 -72411636 - AluY SINE Alu 0 311 1 4342 270 91 50 chr5 130673896 130673921 -72411611 - L1MEc LINE L1 -3682 2533 2510 423 0 0 0 chr5 130673921 130673968 -72411564 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1903 119 4 4 chr5 130673970 130674248 -72411284 - AluSx SINE Alu -34 278 1 4342 270 91 50 chr5 130674248 130674921 -72410611 - L1MEc LINE L1 -3705 2510 1639 375 268 96 64 chr5 130674924 130675144 -72410388 - L1MEc LINE L1 -4650 1565 1339 29 0 0 0 chr5 130675154 130675183 -72410349 + AT_rich Low_complexity Low_complexity 1 29 0 344 289 53 13 chr5 130675204 130675356 -72410176 - L1MEc LINE L1 -5159 1237 1080 3262 81 4 24 chr5 130675389 130675857 -72409675 + L1PA10 LINE L1 5710 6168 0 300 300 44 0 chr5 130675868 130675958 -72409574 + MLT1D LTR MaLR 263 356 -149 334 399 54 5 chr5 130675973 130676044 -72409488 - L1MEc LINE L1 -4616 1991 1925 1119 208 33 42 chr5 130676044 130676285 -72409247 + MER8 DNA MER2_type 1 239 0 334 399 54 5 chr5 130676285 130676436 -72409096 - L1MEc LINE L1 -4682 1925 1758 314 345 53 18 chr5 130676493 130676664 -72408868 + LTR16A LTR ERVL 76 252 -198 864 357 72 28 chr5 130677778 130678703 -72406829 - HERVL LTR ERVL -825 4829 3864 741 307 124 11 chr5 130679157 130679528 -72406004 + LTR16A LTR ERVL 32 444 -6 37 0 0 0 chr5 130679634 130679671 -72405861 + AT_rich Low_complexity Low_complexity 1 37 0 189 266 31 31 chr5 130680138 130680202 -72405330 + MIR3 SINE MIR 133 196 -12 329 294 136 26 chr5 130680339 130680517 -72405015 - L1MEc LINE L1 -5020 1406 1196 2183 126 0 0 chr5 130680517 130680826 -72404706 - AluSq SINE Alu -4 309 1 329 294 136 26 chr5 130680826 130680875 -72404657 - L1MEc LINE L1 -5230 1196 1154 208 365 0 0 chr5 130683737 130683800 -72401732 - L2 LINE L2 -27 3245 3183 448 381 84 16 chr5 130684567 130684950 -72400582 + L3 LINE CR1 1132 1540 -37 486 326 21 21 chr5 130685954 130686141 -72399391 - MIR3 SINE MIR -3 205 19 2304 70 0 35 chr5 130686405 130686719 -72398813 - AluY SINE Alu -8 303 1 206 172 31 31 chr5 130687461 130687525 -72398007 + (TA)n Simple_repeat Simple_repeat 1 64 0 223 250 38 62 chr5 130688571 130688651 -72396881 - L2 LINE L2 -8 3264 3187 208 200 33 0 chr5 130689744 130689804 -72395728 + GA-rich Low_complexity Low_complexity 2 63 0 21 82 0 0 chr5 130689935 130689984 -72395548 + AT_rich Low_complexity Low_complexity 1 49 0 3199 119 10 2 chr5 130690343 130690832 -72394700 - L1PB1 LINE L1 -2 6149 5657 2068 127 16 47 chr5 130691073 130691458 -72394074 + THE1C LTR MaLR 1 373 -2 954 58 0 0 chr5 130692208 130692329 -72393203 + L1PA3 LINE L1 6035 6155 0 551 238 48 27 chr5 130692348 130692538 -72392994 + L1ME3A LINE L1 5767 5959 -203 1962 85 0 12 chr5 130693081 130693340 -72392192 + AluSc SINE Alu 54 309 0 271 188 0 25 chr5 130693468 130693548 -72391984 + (TA)n Simple_repeat Simple_repeat 1 78 0 456 180 60 10 chr5 130693550 130693650 -72391882 - MIR SINE MIR -61 201 97 578 275 0 32 chr5 130693929 130694147 -72391385 - L1MA9 LINE L1 -30 6282 6072 218 235 18 106 chr5 130694257 130694427 -72391105 - L2 LINE L2 -76 3237 3083 1068 260 112 27 chr5 130695372 130695810 -72389722 + HAL1b LINE L1 101 575 -773 995 215 0 11 chr5 130695962 130696148 -72389384 + MER5A DNA MER1_type 1 184 -5 357 242 45 45 chr5 130696888 130697020 -72388512 + HAL1b LINE L1 698 829 -519 280 203 162 27 chr5 130697034 130697108 -72388424 - MER91C DNA MER1_type -30 110 27 400 265 121 26 chr5 130697122 130697394 -72388138 + HAL1b LINE L1 826 1123 -225 26 64 0 0 chr5 130697468 130697515 -72388017 + AT_rich Low_complexity Low_complexity 1 47 0 220 189 0 0 chr5 130697823 130697860 -72387672 + (CA)n Simple_repeat Simple_repeat 2 38 0 241 313 35 76 chr5 130698496 130698640 -72386892 - MIR SINE MIR -114 148 11 473 293 23 23 chr5 130698642 130698816 -72386716 - MER5B DNA MER1_type -1 177 4 535 131 4 63 chr5 130699502 130700024 -72385508 + (TA)n Simple_repeat Simple_repeat 1 491 0 512 231 62 0 chr5 130700272 130700402 -72385130 - L1MA8 LINE L1 -26 6265 6128 3602 62 6 0 chr5 130700407 130700874 -72384658 - L1PA7 LINE L1 0 6154 5685 839 66 0 0 chr5 130700875 130700981 -72384551 + L1PA7 LINE L1 5566 5671 -483 376 114 11 125 chr5 130700977 130701007 -72384525 - L1MA8 LINE L1 -162 6129 6097 * 1778 165 3 10 chr5 130701007 130701310 -72384222 + AluSx SINE Alu 1 301 -11 376 114 11 125 chr5 130701310 130701367 -72384165 - L1MA8 LINE L1 -194 6097 6052 467 113 12 0 chr5 130702277 130702357 -72383175 + (GA)n Simple_repeat Simple_repeat 2 82 0 1882 125 41 10 chr5 130702967 130703262 -72382270 + AluSx SINE Alu 1 304 -8 276 297 224 24 chr5 130704444 130704609 -72380923 + MIR SINE MIR 20 217 -45 564 281 138 18 chr5 130704839 130705056 -72380476 + MIR SINE MIR 19 261 -1 199 403 42 37 chr5 130705874 130706090 -72379442 - L2 LINE L2 -625 2689 2473 264 30 0 0 chr5 130707204 130707237 -72378295 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 10126 29 0 154 chr5 130707237 130708849 -72376683 - SVA Other Other -23 1363 1 32 43 0 0 chr5 130710096 130710142 -72375390 + AT_rich Low_complexity Low_complexity 1 46 0 231 279 23 12 chr5 130710941 130711027 -72374505 + GA-rich Low_complexity Low_complexity 4 90 0 74 0 0 0 chr5 130711939 130712013 -72373519 + AT_rich Low_complexity Low_complexity 1 74 0 963 109 0 0 chr5 130712538 130712675 -72372857 + L1PA7 LINE L1 6015 6151 -3 437 202 40 0 chr5 130712677 130712776 -72372756 + L1MC/D LINE L1 5416 5518 -724 21 0 0 0 chr5 130713677 130713698 -72371834 + AT_rich Low_complexity Low_complexity 1 21 0 367 293 16 24 chr5 130714118 130714241 -72371291 - L2 LINE L2 0 3313 3192 673 237 66 44 chr5 130714718 130714946 -72370586 - MIR SINE MIR -10 252 20 1984 212 55 24 chr5 130715228 130715686 -72369846 - MLT1D LTR MaLR -2 503 32 2583 41 0 25 chr5 130715692 130716009 -72369523 + AluY SINE Alu 1 309 -2 21 0 0 0 chr5 130716254 130716275 -72369257 + AT_rich Low_complexity Low_complexity 1 21 0 480 336 167 19 chr5 130716608 130717033 -72368499 + L2 LINE L2 2811 3298 -15 5672 132 35 4 chr5 130717471 130717962 -72367570 - L1MA5A LINE L1 -1 6296 5821 321 26 0 0 chr5 130717962 130718000 -72367532 + (TG)n Simple_repeat Simple_repeat 1 38 0 5672 132 35 4 chr5 130718000 130718461 -72367071 - L1MA5A LINE L1 -476 5821 5315 4562 124 14 15 chr5 130718453 130719114 -72366418 - L1PA15 LINE L1 -1 6167 5507 * 336 111 0 0 chr5 130719114 130719168 -72366364 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 389 117 33 0 chr5 130719168 130719228 -72366304 - AluS SINE Alu -17 285 224 4562 124 14 15 chr5 130719228 130719315 -72366217 - L1PA15 LINE L1 -659 5509 5389 1075 215 4 0 chr5 130719312 130719558 -72365974 - L1MA5A LINE L1 -816 5330 5084 * 1189 233 79 14 chr5 130719768 130720115 -72365417 + MLT1E LTR MaLR 2 443 -150 794 133 7 0 chr5 130720115 130720250 -72365282 + L1PB1 LINE L1 6013 6148 -3 1189 233 79 14 chr5 130720250 130720412 -72365120 + MLT1E LTR MaLR 443 593 0 2063 126 0 0 chr5 130721233 130721519 -72364013 + AluSx SINE Alu 1 286 -26 355 359 30 12 chr5 130721540 130721707 -72363825 - LTR16C LTR ERVL -143 348 179 341 171 0 53 chr5 130721863 130721939 -72363593 - HAL1b LINE L1 -833 515 444 702 206 60 5 chr5 130722322 130722521 -72363011 - L1M4 LINE L1 -818 5328 5119 987 365 65 33 chr5 130726366 130727156 -72358376 - L2 LINE L2 -341 2973 2159 660 321 45 19 chr5 130727314 130727358 -72358174 + L1MC/D LINE L1 5281 5322 -901 2401 94 0 0 chr5 130727358 130727666 -72357866 + AluSx SINE Alu 2 309 -3 660 321 45 19 chr5 130727666 130727986 -72357546 + L1MC/D LINE L1 5322 5650 -573 22 0 0 0 chr5 130728328 130728350 -72357182 + AT_rich Low_complexity Low_complexity 1 22 0 2510 122 0 22 chr5 130728455 130728825 -72356707 + THE1B LTR MaLR 3 364 0 25 31 0 0 chr5 130729823 130729855 -72355677 + AT_rich Low_complexity Low_complexity 1 32 0 456 248 16 31 chr5 130730079 130730208 -72355324 + MIR SINE MIR 39 165 -97 438 325 38 59 chr5 130730246 130730483 -72355049 - MIR SINE MIR 0 262 31 580 332 57 49 chr5 130731879 130732246 -72353286 - L2 LINE L2 -9 3304 2935 566 291 92 68 chr5 130732617 130733639 -72351893 + L1ME LINE L1 501 1580 -4653 4581 91 87 28 chr5 130733839 130734565 -72350967 - L1PA10 LINE L1 -9 6159 5391 227 279 0 25 chr5 130734573 130734652 -72350880 + L1ME LINE L1 1731 1807 -4454 11467 201 34 40 chr5 130734675 130735697 -72349835 - L1MA5 LINE L1 0 7362 6336 1518 185 4 22 chr5 130735697 130735973 -72349559 - AluJb SINE Alu -41 271 1 11467 201 34 40 chr5 130735973 130737096 -72348436 - L1MA5 LINE L1 -1026 6336 5208 1965 166 0 6 chr5 130737096 130737410 -72348122 - AluSx SINE Alu 0 312 1 11467 201 34 40 chr5 130737410 130739255 -72346277 - L1MA5 LINE L1 -2154 5208 3354 2073 126 42 31 chr5 130739255 130739612 -72345920 + THE1B LTR MaLR 4 364 0 11467 201 34 40 chr5 130739612 130741377 -72344155 - L1MA5 LINE L1 -4008 3354 1305 2146 102 7 7 chr5 130741450 130741745 -72343787 + AluSg SINE Alu 1 295 -15 246 298 64 18 chr5 130741757 130741975 -72343557 + L1ME LINE L1 1847 2074 -4006 1964 258 68 14 chr5 130741992 130742752 -72342780 + L1ME LINE L1 2118 2918 -3162 422 336 89 0 chr5 130744900 130745135 -72340397 + MER102a DNA MER1_type 75 330 0 340 336 97 6 chr5 130745823 130746027 -72339505 + MIR SINE MIR 39 256 -6 264 337 104 39 chr5 130746170 130746505 -72339027 - MLT1K LTR MaLR -1 587 231 192 245 0 41 chr5 130747033 130747082 -72338450 + MIR SINE MIR 203 249 -13 183 42 0 0 chr5 130748274 130748298 -72337234 + (A)n Simple_repeat Simple_repeat 1 24 0 242 267 69 69 chr5 130748893 130748994 -72336538 + MIR3 SINE MIR 62 162 -46 321 320 119 26 chr5 130749027 130749221 -72336311 - MIR SINE MIR -46 216 5 232 326 0 0 chr5 130749338 130749387 -72336145 - L2 LINE L2 -20 3252 3204 40 37 0 0 chr5 130749708 130749762 -72335770 + AT_rich Low_complexity Low_complexity 1 54 0 23 33 0 0 chr5 130749972 130750002 -72335530 + AT_rich Low_complexity Low_complexity 1 30 0 428 256 124 70 chr5 130750292 130750565 -72334967 - MER5C DNA MER1_type -1 323 36 426 200 91 45 chr5 130750596 130750706 -72334826 - MLT1J1 LTR MaLR 0 446 361 267 290 90 35 chr5 130750784 130750929 -72334603 - MLT1J2 LTR MaLR -232 218 66 325 253 78 39 chr5 130751806 130751960 -72333572 + L1MCa LINE L1 1904 2063 -4363 * 340 259 47 0 chr5 130751933 130752018 -72333514 + L1MC4 LINE L1 6895 6983 -1339 321 322 0 0 chr5 130751990 130752080 -72333452 - L1MC4 LINE L1 -1339 6703 6614 * 349 261 0 22 chr5 130752072 130752164 -72333368 + L1MC4 LINE L1 6614 6703 -1339 1245 255 59 15 chr5 130752226 130752618 -72332914 + L1ME1 LINE L1 57 465 -5958 2459 47 0 22 chr5 130753045 130753363 -72332169 + AluY SINE Alu 1 311 0 552 275 90 84 chr5 130753378 130753854 -72331678 + L1ME1 LINE L1 924 1402 -5021 584 288 16 14 chr5 130754051 130754327 -72331205 + L1PA15-16 LINE L1 1706 2276 -4150 2912 233 83 41 chr5 130754378 130756011 -72329521 + L1ME1 LINE L1 5260 6956 -5 2088 94 0 13 chr5 130756222 130756520 -72329012 - L1PA7 LINE L1 0 6154 5861 3137 55 8 2 chr5 130756520 130756919 -72328613 + L1P3 LINE L1 5334 5734 -420 245 192 0 0 chr5 130757361 130757413 -72328119 + A-rich Low_complexity Low_complexity 2 53 0 786 245 43 39 chr5 130757803 130758036 -72327496 - MLT1F1 LTR MaLR -3 564 331 341 279 58 39 chr5 130758098 130758291 -72327241 - MLT1F1 LTR MaLR -371 196 1 423 231 94 80 chr5 130759814 130760026 -72325506 - MIR SINE MIR -14 248 34 279 0 0 0 chr5 130760097 130760128 -72325404 + (TG)n Simple_repeat Simple_repeat 2 32 0 214 361 8 17 chr5 130760158 130760277 -72325255 - L2 LINE L2 -607 2707 2590 261 0 0 0 chr5 130761521 130761550 -72323982 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 82 0 0 chr5 130761995 130762044 -72323488 + AT_rich Low_complexity Low_complexity 1 49 0 426 323 40 12 chr5 130762178 130762393 -72323139 - MIR SINE MIR 0 262 1 207 0 0 0 chr5 130762478 130762501 -72323031 + (TAA)n Simple_repeat Simple_repeat 3 25 0 3645 221 39 24 chr5 130762501 130762622 -72322910 - L1MC3 LINE L1 -827 6958 6840 1850 149 13 0 chr5 130762622 130762634 -72322898 - AluJo SINE Alu 0 312 302 189 0 0 0 chr5 130762634 130762655 -72322877 + (TG)n Simple_repeat Simple_repeat 2 22 0 1850 149 13 0 chr5 130762655 130762950 -72322582 - AluJo SINE Alu -10 302 1 3645 221 39 24 chr5 130762950 130763732 -72321800 - L1MC3 LINE L1 -945 6840 6042 272 226 36 0 chr5 130763717 130763801 -72321731 + L1MC3 LINE L1 7017 7103 -682 * 227 338 0 12 chr5 130763806 130763886 -72321646 + MLT1F1 LTR MaLR 47 125 -442 2655 173 50 17 chr5 130763886 130764464 -72321068 + L1MC3 LINE L1 7189 7785 0 223 311 50 50 chr5 130766341 130766460 -72319072 - L2 LINE L2 -15 3298 3180 2375 78 0 10 chr5 130766915 130767224 -72318308 + AluY SINE Alu 1 306 -5 283 253 13 0 chr5 130767242 130767321 -72318211 - MER103 DNA DNA -43 123 44 230 358 102 23 chr5 130767646 130767861 -72317671 - MIR SINE MIR -5 257 26 250 262 83 0 chr5 130768557 130768641 -72316891 - L2 LINE L2 0 3313 3223 216 0 0 0 chr5 130768870 130768894 -72316638 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6219 70 16 19 chr5 130771536 130772546 -72312986 + L1PA7 LINE L1 5138 6143 -11 437 311 44 22 chr5 130772596 130772779 -72312753 + MIR SINE MIR 28 214 -48 1230 172 33 21 chr5 130774257 130774702 -72310830 + LTR54 LTR ERV1 1 510 0 25 0 0 0 chr5 130775557 130775582 -72309950 + AT_rich Low_complexity Low_complexity 1 25 0 199 284 49 0 chr5 130778501 130778582 -72306950 - MIR SINE MIR 0 262 178 1429 216 186 8 chr5 130779306 130779705 -72305827 + MLT1E2 LTR MaLR 155 624 -2 228 67 0 0 chr5 130780301 130780331 -72305201 + (TA)n Simple_repeat Simple_repeat 2 31 0 * 414 0 0 0 chr5 130780330 130780376 -72305156 + (TG)n Simple_repeat Simple_repeat 1 46 0 814 137 0 0 chr5 130780376 130780500 -72305032 - AluSg/x SINE Alu -31 279 156 614 290 201 36 chr5 130780522 130781015 -72304517 + HAL1 LINE L1 1 574 -1933 682 199 199 0 chr5 130781108 130781264 -72304268 + MER58A DNA MER1_type 37 223 -1 435 290 78 55 chr5 130781284 130781773 -72303759 + HAL1 LINE L1 667 1166 -1341 402 34 169 0 chr5 130781945 130782004 -72303528 - MADE1 DNA Mariner 0 80 12 393 58 0 0 chr5 130783268 130783320 -72302212 + (CA)n Simple_repeat Simple_repeat 2 53 0 344 215 44 7 chr5 130783508 130783643 -72301889 + (TA)n Simple_repeat Simple_repeat 1 140 0 557 311 11 6 chr5 130783649 130783826 -72301706 + Charlie8 DNA MER1_type 88 265 -2152 1784 270 119 13 chr5 130786043 130786743 -72298789 - L1ME3A LINE L1 -26 6144 5371 258 81 0 0 chr5 130788001 130788038 -72297494 + (CCTG)n Simple_repeat Simple_repeat 2 38 0 2161 102 27 0 chr5 130788040 130788334 -72297198 - AluSg SINE Alu -8 302 1 21 0 0 0 chr5 130788692 130788713 -72296819 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr5 130788860 130788904 -72296628 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 236 77 26 0 chr5 130788905 130788944 -72296588 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 303 282 39 0 chr5 130790276 130790354 -72295178 + L2 LINE L2 3230 3310 -3 235 318 9 47 chr5 130793419 130793526 -72292006 + MIR SINE MIR 52 154 -108 256 211 58 0 chr5 130794260 130794312 -72291220 - MIR SINE MIR -102 160 106 378 272 40 16 chr5 130794650 130794775 -72290757 - MIR SINE MIR -4 258 131 1589 205 39 36 chr5 130795652 130796091 -72289441 - Charlie4a DNA MER1_type -8 500 61 345 47 0 0 chr5 130796197 130796240 -72289292 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1881 110 0 58 chr5 130796243 130796535 -72288997 - AluSc SINE Alu -30 279 5 1332 37 0 12 chr5 130797338 130797532 -72288000 - AluY SINE Alu 0 313 122 2501 64 0 0 chr5 130797532 130797843 -72287689 - AluYa5 SINE Alu 0 311 1 313 309 14 73 chr5 130797959 130798288 -72287244 - L1ME LINE L1 -330 5791 5486 195 42 0 0 chr5 130798791 130798815 -72286717 + (TC)n Simple_repeat Simple_repeat 2 25 0 29 0 0 0 chr5 130800218 130800247 -72285285 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 130800368 130800389 -72285143 + AT_rich Low_complexity Low_complexity 1 21 0 517 336 24 36 chr5 130802140 130802387 -72283145 - MIR SINE MIR -11 251 8 606 211 135 0 chr5 130802632 130802793 -72282739 - MER5A DNA MER1_type 0 189 4 325 251 115 105 chr5 130803266 130803457 -72282075 - MLT1H LTR MaLR -4 650 428 565 234 109 15 chr5 130803515 130803716 -72281816 - L1M4 LINE L1 -1979 4167 3948 348 259 109 60 chr5 130803787 130803988 -72281544 - MLT1H LTR MaLR -285 264 54 285 253 28 118 chr5 130804134 130804312 -72281220 - MLT1H-int LTR MaLR -182 1189 1028 356 274 0 0 chr5 130805307 130805391 -72280141 - MLT1H LTR MaLR -8 541 458 290 323 55 51 chr5 130805456 130805691 -72279841 - MLT1H LTR MaLR -243 306 71 21 36 0 0 chr5 130805759 130805787 -72279745 + AT_rich Low_complexity Low_complexity 1 28 0 301 314 9 0 chr5 130805817 130805922 -72279610 + (TA)n Simple_repeat Simple_repeat 2 107 0 23 0 0 0 chr5 130806087 130806110 -72279422 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 130806983 130807006 -72278526 + AT_rich Low_complexity Low_complexity 1 23 0 461 208 88 57 chr5 130807164 130807323 -72278209 - HAL1 LINE L1 -204 2303 2140 1939 263 71 116 chr5 130807342 130808314 -72277218 - HAL1 LINE L1 -680 1827 944 366 23 0 0 chr5 130808314 130808357 -72277175 + (TG)n Simple_repeat Simple_repeat 1 43 0 1939 263 71 116 chr5 130808357 130808896 -72276636 - HAL1 LINE L1 -1563 944 383 21 0 0 0 chr5 130809446 130809467 -72276065 + AT_rich Low_complexity Low_complexity 1 21 0 239 354 56 15 chr5 130809469 130809667 -72275865 - L2 LINE L2 -1809 1505 1300 508 275 83 25 chr5 130809768 130810106 -72275426 - MLT1J1 LTR MaLR -48 398 12 24 53 0 0 chr5 130810722 130810760 -72274772 + AT_rich Low_complexity Low_complexity 1 38 0 454 342 109 31 chr5 130812410 130812875 -72272657 - L2 LINE L2 -42 3271 2772 229 351 40 0 chr5 130812947 130813021 -72272511 + L2 LINE L2 3191 3267 -5 7528 30 0 0 chr5 130813479 130814420 -72271112 - L1PA4 LINE L1 0 6155 5216 21 0 0 0 chr5 130815121 130815142 -72270390 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr5 130815180 130815207 -72270325 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 427 330 96 66 chr5 130815753 130816086 -72269446 - L2 LINE L2 -1 3271 2929 616 293 27 31 chr5 130816224 130816446 -72269086 + MIR SINE MIR 1 221 -41 2377 191 33 70 chr5 130816501 130817090 -72268442 - L1MB8 LINE L1 -1 6177 5613 1579 127 0 0 chr5 130817090 130817310 -72268222 - AluSg/x SINE Alu -11 301 82 2377 191 33 70 chr5 130817310 130817380 -72268152 - L1MB8 LINE L1 -565 5613 5542 622 227 65 9 chr5 130817376 130817592 -72267940 - L1MB8 LINE L1 -807 5339 5112 * 3192 224 118 51 chr5 130817585 130818362 -72267170 - L1MC2 LINE L1 -283 6061 5337 2083 118 10 0 chr5 130818362 130818651 -72266881 - AluY SINE Alu -19 292 1 3192 224 118 51 chr5 130818651 130820345 -72265187 - L1MC2 LINE L1 -1007 5337 3427 4046 226 45 3 chr5 130820467 130821509 -72264023 + L1 LINE L1 4076 5161 -985 667 194 23 8 chr5 130821516 130821645 -72263887 + FLAM_A SINE Alu 8 138 -4 349 248 21 41 chr5 130821671 130821816 -72263716 + L1 LINE L1 5191 5332 -814 579 244 23 0 chr5 130821816 130821947 -72263585 + MSTB LTR MaLR 211 344 -82 6379 82 15 8 chr5 130822314 130823319 -72262213 - L1PA5 LINE L1 -9 6145 5138 216 0 0 0 chr5 130825967 130825991 -72259541 + (CAA)n Simple_repeat Simple_repeat 2 25 0 250 262 83 0 chr5 130826220 130826304 -72259228 + L2 LINE L2 3223 3313 0 209 363 102 23 chr5 130827000 130827215 -72258317 + MIR SINE MIR 26 257 -5 283 253 13 0 chr5 130827540 130827619 -72257913 + MER103 DNA DNA 44 123 -43 2442 75 0 0 chr5 130827637 130827943 -72257589 - AluY SINE Alu -5 306 1 223 311 50 50 chr5 130828399 130828518 -72257014 + L2 LINE L2 3180 3298 -15 2510 175 41 19 chr5 130830384 130830915 -72254617 - L1MC3 LINE L1 0 7785 7243 1795 125 4 0 chr5 130831015 130831263 -72254269 - AluY SINE Alu -62 249 1 4282 250 121 45 chr5 130831263 130833440 -72252092 - L1M4 LINE L1 -884 5262 2922 860 154 13 0 chr5 130833463 130833612 -72251920 - L1PA13 LINE L1 -10 6153 6003 1695 258 107 33 chr5 130833728 130834657 -72250875 - L1MCa LINE L1 -2228 4729 3733 2025 165 8 5 chr5 130834680 130835049 -72250483 - L1PA13 LINE L1 -10 6153 5784 966 224 21 62 chr5 130835288 130835578 -72249954 + LTR4 LTR ERV1 317 594 -2 2160 199 12 2 chr5 130835612 130836040 -72249492 + L1P LINE L1 4660 5091 -1055 356 280 23 26 chr5 130836034 130836252 -72249280 - L1MCa LINE L1 -3239 3718 3444 * 1255 243 72 63 chr5 130836321 130836921 -72248611 - L1MCa LINE L1 -5211 1291 789 23 0 0 0 chr5 130837116 130837139 -72248393 + AT_rich Low_complexity Low_complexity 1 23 0 1909 266 37 81 chr5 130837413 130838145 -72247387 - L1MCa LINE L1 -6066 793 94 4365 196 14 11 chr5 130838164 130839023 -72246509 - L1MB3 LINE L1 -3 6180 5319 236 214 7 69 chr5 130839068 130839213 -72246319 + A-rich Low_complexity Low_complexity 5 140 0 2083 126 0 16 chr5 130839445 130839755 -72245777 - AluSx SINE Alu -7 305 1 8295 54 22 7 chr5 130841664 130842954 -72242578 + L1PA10 LINE L1 4352 5664 -491 1707 121 56 50 chr5 130843230 130843552 -72241980 + L1PA10 LINE L1 5836 6159 -9 580 294 93 11 chr5 130843752 130844119 -72241413 - L1MEc LINE L1 -4681 1882 1486 302 247 25 37 chr5 130844146 130844227 -72241305 - L1MEc LINE L1 -5039 1345 1266 2105 103 0 3 chr5 130945343 130945652 -72139880 - AluY SINE Alu 0 308 1 911 241 4 43 chr5 130946128 130946360 -72139172 - MIR SINE MIR -6 256 34 1165 217 114 18 chr5 130946653 130946994 -72138538 + MLT1A2 LTR MaLR 1 374 0 456 318 124 14 chr5 130949180 130949397 -72136135 + MIR SINE MIR 6 246 -16 438 299 80 23 chr5 130949432 130949623 -72135909 - MIR3 SINE MIR -5 203 4 26 88 0 0 chr5 130950443 130950511 -72135021 + AT_rich Low_complexity Low_complexity 1 68 0 1045 258 56 4 chr5 130951206 130951474 -72134058 + L1MC4 LINE L1 6728 7009 -1033 6554 238 35 16 chr5 130951479 130953484 -72132048 + L1MC1 LINE L1 3191 5233 -913 1578 163 42 16 chr5 130953480 130953670 -72131862 + L1MC1 LINE L1 5826 6010 -323 * 6024 89 53 8 chr5 130953670 130955157 -72130375 - L1PA11 LINE L1 -1 6173 4622 1578 163 42 16 chr5 130955157 130955463 -72130069 + L1MC1 LINE L1 6010 6320 -13 1670 261 98 11 chr5 130955592 130956294 -72129238 + L1MC4 LINE L1 7131 7893 -149 439 307 97 44 chr5 130956503 130957269 -72128263 - L1M4 LINE L1 -1649 4497 3692 33 43 0 0 chr5 130958552 130958599 -72126933 + AT_rich Low_complexity Low_complexity 1 47 0 192 315 46 46 chr5 130958694 130958824 -72126708 - MIR SINE MIR -56 206 77 644 334 67 14 chr5 130958948 130959364 -72126168 + MLT1L LTR MaLR 90 527 -88 2365 65 3 7 chr5 130959491 130959798 -72125734 - AluY SINE Alu -5 306 1 22 0 0 0 chr5 130960059 130960081 -72125451 + AT_rich Low_complexity Low_complexity 1 22 0 394 331 109 43 chr5 130960930 130961277 -72124255 - HAL1b LINE L1 -925 423 54 6797 56 8 12 chr5 130961298 130961886 -72123646 - L1P LINE L1 -1233 4913 4329 2110 101 0 16 chr5 130961886 130962194 -72123338 - AluSg SINE Alu -7 303 1 6797 56 8 12 chr5 130962194 130962521 -72123011 - L1P LINE L1 -1817 4329 4002 2507 161 20 16 chr5 130962521 130962974 -72122558 - Tigger1 DNA MER2_type -1962 456 2 13469 31 1 0 chr5 130963587 130965212 -72120320 - L1PA3 LINE L1 -1233 4913 3288 7430 28 12 0 chr5 130965212 130966428 -72119104 + L1PA3 LINE L1 4925 6152 -3 377 360 116 45 chr5 130966793 130967177 -72118355 + HAL1 LINE L1 1 443 -2064 3227 159 36 58 chr5 130967177 130967346 -72118186 - LTR8A LTR ERV1 0 727 556 1882 167 0 0 chr5 130967346 130967628 -72117904 - AluSx SINE Alu -28 284 3 3227 159 36 58 chr5 130967628 130968201 -72117331 - LTR8A LTR ERV1 -171 556 1 377 360 116 45 chr5 130968201 130968400 -72117132 + HAL1 LINE L1 443 626 -1881 1669 216 28 15 chr5 130968426 130968819 -72116713 + MER67D LTR ERV1 1 398 -116 3860 164 26 10 chr5 130968819 130969518 -72116014 + MER50 LTR ERV1 1 710 -24 3344 158 30 25 chr5 130969601 130970210 -72115322 - LTR9 LTR ERV1 0 612 1 261 239 30 0 chr5 130970340 130970407 -72115125 + HAL1 LINE L1 804 872 -1635 207 337 0 0 chr5 130970714 130970797 -72114735 + GA-rich Low_complexity Low_complexity 2 84 0 232 257 88 35 chr5 130970816 130970987 -72114545 + L1M4 LINE L1 2144 2323 -3823 321 297 81 14 chr5 130971043 130971390 -72114142 - L1MEd LINE L1 -3522 2607 2238 2389 142 35 21 chr5 130971691 130972113 -72113419 + MSTA LTR MaLR 1 428 0 233 0 62 0 chr5 130972289 130972321 -72113211 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 216 122 0 0 chr5 130972522 130972563 -72112969 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2070 121 0 0 chr5 130972568 130972857 -72112675 - AluSx SINE Alu -20 292 4 382 285 18 42 chr5 130972978 130973143 -72112389 - L1MEd LINE L1 -5937 182 22 26 64 0 0 chr5 130973166 130973213 -72112319 + AT_rich Low_complexity Low_complexity 1 47 0 17652 28 3 1 chr5 130973549 130975711 -72109821 - L1P LINE L1 -1543 4603 2437 7382 38 1 0 chr5 130975711 130976604 -72108928 + L1PA4 LINE L1 5255 6152 -3 269 316 9 9 chr5 130977219 130977333 -72108199 + MLT1H LTR MaLR 35 148 -401 5901 154 37 2 chr5 130978057 130979319 -72106213 + L1MA4A LINE L1 4998 6296 -7 2841 6 0 0 chr5 130979725 130980036 -72105496 - AluY SINE Alu 0 311 1 729 204 19 0 chr5 130980080 130980242 -72105290 + L1 LINE L1 5118 5282 -864 653 181 8 8 chr5 130980238 130980371 -72105161 + L1 LINE L1 5150 5282 -864 * 267 103 0 0 chr5 130980717 130980756 -72104776 + (A)n Simple_repeat Simple_repeat 1 39 0 437 236 133 44 chr5 130981723 130982077 -72103455 - L1MEc LINE L1 -3739 2806 2460 660 214 82 51 chr5 130982101 130982297 -72103235 - L1MD2 LINE L1 -238 6121 5920 1139 141 52 0 chr5 130982337 130982528 -72103004 - MLT1B LTR MaLR 0 390 190 719 161 66 0 chr5 130982556 130982693 -72102839 - L1MEc LINE L1 -6358 182 37 291 304 94 33 chr5 130982961 130983734 -72101798 - L1M4c LINE L1 -4616 1780 954 441 0 0 0 chr5 130984604 130984653 -72100879 + (TA)n Simple_repeat Simple_repeat 1 49 0 197 298 35 0 chr5 130985221 130985278 -72100254 - L2 LINE L2 -17 3296 3238 936 129 10 129 chr5 130987933 130988135 -72097397 - AluSx SINE Alu -8 304 127 5691 17 6 1 chr5 130988137 130988799 -72096733 - L1PA2 LINE L1 0 6155 5491 4401 19 3 0 chr5 130988800 130989418 -72096114 + L1PA2 LINE L1 4868 5486 -669 917 141 0 0 chr5 130989418 130989553 -72095979 - AluSx SINE Alu -177 135 1 27 0 0 0 chr5 130989577 130989604 -72095928 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr5 130992337 130992359 -72093173 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr5 130992945 130992988 -72092544 + (TG)n Simple_repeat Simple_repeat 2 44 0 2050 126 0 0 chr5 130993490 130993784 -72091748 + AluSq SINE Alu 18 311 -2 1362 225 78 42 chr5 130995186 130995747 -72089785 + MLT1E3 LTR MaLR 2 624 0 439 275 52 72 chr5 130995891 130996084 -72089448 + MIR SINE MIR 14 202 -60 228 284 49 0 chr5 130996099 130996180 -72089352 + MIR SINE MIR 178 262 0 315 200 0 15 chr5 130996334 130996399 -72089133 + MLT1B LTR MaLR 1 64 -403 1131 196 42 106 chr5 130996419 130996806 -72088726 + MLT1B LTR MaLR 28 374 0 253 234 0 0 chr5 130996829 130996893 -72088639 + LTR33 LTR ERVL 19 82 -439 204 253 60 12 chr5 130997296 130997379 -72088153 + L2 LINE L2 2147 2233 -1081 527 324 43 82 chr5 130997682 130997738 -72087794 + L2 LINE L2 2890 2947 -366 1367 227 12 102 chr5 130997738 130998307 -72087225 + MLT2B1 LTR ERVL 2 519 -1 527 324 43 82 chr5 130998307 130998689 -72086843 + L2 LINE L2 2947 3311 -2 245 307 127 70 chr5 130998693 130998937 -72086595 - L2 LINE L2 -173 3099 2842 264 214 18 0 chr5 130999071 130999127 -72086405 + Charlie1 DNA MER1_type 1 57 -2704 404 219 67 9 chr5 130999234 130999339 -72086193 + Charlie1 DNA MER1_type 2651 2761 0 613 200 32 8 chr5 130999550 130999675 -72085857 - FLAM_C SINE Alu -14 129 2 375 78 0 0 chr5 130999738 130999789 -72085743 + (CA)n Simple_repeat Simple_repeat 1 51 0 248 299 104 0 chr5 131002192 131002269 -72083263 - L2 LINE L2 -19 3294 3210 1956 125 0 21 chr5 131002473 131002760 -72082772 - AluSg SINE Alu -18 292 12 190 205 26 0 chr5 131004397 131004436 -72081096 - L2 LINE L2 -4 3268 3229 1507 129 30 4 chr5 131004880 131005113 -72080419 - AluSg/x SINE Alu -3 307 69 1209 290 120 19 chr5 131005325 131006015 -72079517 + L1MC4a LINE L1 5511 6270 -1538 1141 162 72 4 chr5 131006059 131006294 -72079238 + L1MB3 LINE L1 5931 6181 -2 500 133 18 26 chr5 131006311 131006424 -72079108 + GA-rich Low_complexity Low_complexity 2 113 0 2663 265 64 49 chr5 131006522 131007658 -72077874 + L1MC4 LINE L1 6354 7506 -536 552 268 110 13 chr5 131007723 131008040 -72077492 - L1M4 LINE L1 -852 5294 4947 202 400 106 19 chr5 131008040 131008305 -72077227 - L2 LINE L2 -2987 327 40 808 252 28 23 chr5 131009559 131009777 -72075755 - MLT1E2 LTR MaLR 0 626 408 2516 94 3 19 chr5 131009777 131010138 -72075394 + THE1A LTR MaLR 1 355 0 3703 100 8 2 chr5 131010138 131010669 -72074863 + THE1A-int LTR MaLR 1 534 -1046 972 65 16 0 chr5 131010669 131010793 -72074739 + THE1A LTR MaLR 229 354 -1 498 323 32 21 chr5 131010795 131010984 -72074548 - MLT1E2 LTR MaLR -209 415 225 392 224 147 17 chr5 131011029 131011145 -72074387 - MLT1E2 LTR MaLR -523 131 1 2385 120 13 0 chr5 131011928 131012304 -72073228 - L1MA5A LINE L1 0 6297 5917 757 266 118 56 chr5 131012427 131012909 -72072623 - MLT1F1 LTR MaLR -6 561 50 23 0 0 0 chr5 131013210 131013233 -72072299 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 131013308 131013333 -72072199 + AT_rich Low_complexity Low_complexity 1 25 0 8942 183 103 15 chr5 131015103 131017301 -72068231 + L1M4c LINE L1 246 2626 -3756 1804 155 0 0 chr5 131020881 131021159 -72064373 + AluSx SINE Alu 26 303 -9 26 30 0 0 chr5 131021769 131021802 -72063730 + AT_rich Low_complexity Low_complexity 1 33 0 290 324 97 0 chr5 131022477 131022622 -72062910 + MIR SINE MIR 91 249 -13 274 289 33 11 chr5 131022743 131022833 -72062699 + (CGTG)n Simple_repeat Simple_repeat 4 95 0 22 0 0 0 chr5 131024678 131024700 -72060832 + AT_rich Low_complexity Low_complexity 1 22 0 2000 122 7 3 chr5 131024700 131024987 -72060545 - AluSx SINE Alu -24 288 1 371 283 41 14 chr5 131025745 131025890 -72059642 + L1ME LINE L1 5515 5663 -458 574 160 0 0 chr5 131025924 131026024 -72059508 + AluSg/x SINE Alu 211 310 0 382 296 48 32 chr5 131026390 131026576 -72058956 - MIR SINE MIR 0 262 74 626 281 43 47 chr5 131027785 131028041 -72057491 - MIR SINE MIR -5 257 3 206 338 14 14 chr5 131028398 131028469 -72057063 + MIR SINE MIR 29 99 -163 365 364 45 17 chr5 131028529 131028705 -72056827 + MER5A DNA MER1_type 9 189 0 985 187 0 67 chr5 131028985 131029194 -72056338 - AluJb SINE Alu -38 274 80 4267 178 52 20 chr5 131029195 131029258 -72056274 - L1MA3 LINE L1 -52 7672 7612 1948 211 60 2 chr5 131029258 131029661 -72055871 - MSTA LTR MaLR -2 426 1 8405 165 64 18 chr5 131029661 131031240 -72054292 - MSTA-int LTR MaLR 0 1651 1 2053 179 83 2 chr5 131031240 131031636 -72053896 - MSTA LTR MaLR 0 428 1 4267 178 52 20 chr5 131031636 131032471 -72053061 - L1MA3 LINE L1 -111 7613 6743 1011 189 47 24 chr5 131032477 131032689 -72052843 - AluJo SINE Alu -11 301 85 12036 197 50 37 chr5 131032691 131036097 -72049435 - L1MA3 LINE L1 -819 6746 3306 207 0 0 0 chr5 131036198 131036221 -72049311 + (TA)n Simple_repeat Simple_repeat 2 24 0 2109 107 0 14 chr5 131036223 131036513 -72049019 - AluSx SINE Alu -26 286 1 431 350 37 37 chr5 131036890 131037187 -72048345 - L1MEc LINE L1 -6083 313 17 928 88 15 22 chr5 131037298 131037434 -72048098 + AluSg/x SINE Alu 176 310 -2 1572 166 33 27 chr5 131037435 131037772 -72047760 + L1MB3 LINE L1 5760 6098 -85 181 352 213 9 chr5 131038122 131038338 -72047194 + L3b LINE CR1 1254 1513 -70 1059 90 12 30 chr5 131038754 131038921 -72046611 + L1PA13 LINE L1 5997 6160 -3 25 0 0 0 chr5 131038921 131038946 -72046586 + AT_rich Low_complexity Low_complexity 1 25 0 424 251 54 79 chr5 131039400 131039603 -72045929 + LTR33A LTR ERVL 13 210 -313 2016 136 3 10 chr5 131039832 131040134 -72045398 + AluSx SINE Alu 1 300 -12 322 308 38 38 chr5 131040258 131040391 -72045141 + L2 LINE L2 3179 3311 -2 398 35 0 18 chr5 131040602 131040659 -72044873 + (TA)n Simple_repeat Simple_repeat 2 57 0 1830 156 6 13 chr5 131040660 131040975 -72044557 - AluSq SINE Alu 0 313 1 2182 119 0 0 chr5 131041942 131042237 -72043295 - AluSg1 SINE Alu -8 301 7 789 281 106 26 chr5 131042695 131043044 -72042488 - LTR16A LTR ERVL 0 457 81 2352 107 0 0 chr5 131043227 131043536 -72041996 + AluSg SINE Alu 1 309 -1 322 362 57 24 chr5 131044035 131044245 -72041287 + MIR SINE MIR 46 262 0 323 68 0 0 chr5 131044512 131044556 -72040976 - U5 snRNA snRNA -72 44 1 423 220 69 129 chr5 131045147 131045379 -72040153 - LTR67 LTR ERVL 0 557 340 411 279 27 9 chr5 131046162 131046273 -72039259 + L2 LINE L2 3200 3312 -1 481 253 215 58 chr5 131046897 131047273 -72038259 - MLT1F1 LTR MaLR -2 565 131 430 300 30 93 chr5 131047273 131047543 -72037989 - MLT1F1-int LTR MaLR -95 1276 1024 248 0 31 0 chr5 131048005 131048037 -72037495 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 662 297 69 14 chr5 131048138 131048428 -72037104 - MLT1F1-int LTR MaLR -777 594 289 281 218 91 4 chr5 131048452 131048583 -72036949 - MLT1F1-int LTR MaLR -1221 150 2 799 196 26 37 chr5 131048595 131048784 -72036748 - MLT1F1 LTR MaLR -11 556 370 479 279 111 41 chr5 131048806 131049050 -72036482 - MLT1F1 LTR MaLR -281 261 1 2297 106 3 0 chr5 131049100 131049402 -72036130 + AluSx SINE Alu 1 303 -9 2052 124 47 14 chr5 131049950 131050313 -72035219 + THE1C LTR MaLR 1 375 0 912 275 94 39 chr5 131050804 131051270 -72034262 + MLT1H1 LTR MaLR 64 555 0 7620 27 0 2 chr5 131052246 131053513 -72032019 - L1PA2 LINE L1 0 6155 4890 24 0 0 0 chr5 131053850 131053874 -72031658 + AT_rich Low_complexity Low_complexity 1 24 0 351 302 47 0 chr5 131054560 131054666 -72030866 - L2 LINE L2 0 3313 3203 1504 181 26 57 chr5 131054666 131055053 -72030479 + THE1C LTR MaLR 1 375 0 2212 97 0 36 chr5 131055190 131055499 -72030033 + AluSq SINE Alu 1 298 -15 503 157 29 0 chr5 131055536 131055638 -72029894 - L1MA9 LINE L1 -38 6274 6170 195 352 106 27 chr5 131055698 131055954 -72029578 + L2 LINE L2 2468 2743 -571 976 39 0 32 chr5 131056019 131056174 -72029358 + (CCTAT)n Simple_repeat Simple_repeat 3 152 0 207 186 0 0 chr5 131056174 131056217 -72029315 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 210 363 20 10 chr5 131056403 131056505 -72029027 + L2 LINE L2 2866 2968 -304 415 291 31 24 chr5 131056605 131056732 -72028800 - MIR SINE MIR -90 172 45 200 183 95 88 chr5 131056944 131057049 -72028483 + MIR SINE MIR 45 149 -113 781 219 29 29 chr5 131057822 131058027 -72027505 + MER3 DNA MER1_type 5 209 0 2230 91 30 0 chr5 131058562 131058860 -72026672 - AluSc SINE Alu -2 307 1 329 348 88 44 chr5 131060244 131060471 -72025061 + L3 LINE CR1 1339 1575 -2 234 264 0 22 chr5 131062788 131062879 -72022653 + L1MC4 LINE L1 6615 6703 -1339 * 281 234 0 43 chr5 131062851 131062945 -72022587 - L1MC4 LINE L1 -1339 6703 6614 1764 129 91 0 chr5 131062970 131063234 -72022298 - AluSx SINE Alu -24 288 1 3235 152 24 27 chr5 131064089 131064727 -72020805 + L1MC2 LINE L1 5693 6328 -16 21 0 0 0 chr5 131065251 131065272 -72020260 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 131066001 131066030 -72019502 + AT_rich Low_complexity Low_complexity 1 29 0 1114 288 64 22 chr5 131066144 131066693 -72018839 + L1ME1 LINE L1 26 597 -5826 393 276 32 69 chr5 131066755 131066972 -72018560 + L1ME1 LINE L1 820 1028 -5395 1381 263 29 22 chr5 131067019 131067566 -72017966 + L1ME1 LINE L1 5061 5611 -1330 2372 250 90 13 chr5 131067568 131068614 -72016918 + L1ME1 LINE L1 5834 6953 -8 432 294 78 73 chr5 131069053 131069397 -72016135 - MARNA DNA Mariner -157 429 84 200 31 62 0 chr5 131070032 131070064 -72015468 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 191 280 97 54 chr5 131070067 131070160 -72015372 - L2 LINE L2 -10 3303 3207 351 314 75 5 chr5 131071142 131071273 -72014259 + MIR SINE MIR 8 144 -64 364 310 23 23 chr5 131071544 131071673 -72013859 + MLT1J1 LTR MaLR 34 162 -284 180 77 0 0 chr5 131071970 131071996 -72013536 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1329 288 136 56 chr5 131071996 131073162 -72012370 + L2 LINE L2 2049 3313 0 457 352 94 21 chr5 131073337 131073709 -72011823 - L2 LINE L2 -458 2856 2458 213 393 101 7 chr5 131074498 131074796 -72010736 - L2 LINE L2 -1234 2080 1755 387 0 0 0 chr5 131075095 131075138 -72010394 + (TA)n Simple_repeat Simple_repeat 1 43 0 703 269 67 36 chr5 131076483 131076706 -72008826 + L1MEc LINE L1 121 350 -6046 256 158 12 134 chr5 131077027 131077109 -72008423 + MLT1D LTR MaLR 424 495 -10 252 217 28 183 chr5 131077175 131077355 -72008177 + L2 LINE L2 3162 3313 0 766 270 37 33 chr5 131077550 131077765 -72007767 - L1MEc LINE L1 -6048 348 133 2028 132 0 26 chr5 131077796 131078099 -72007433 + AluSq SINE Alu 1 295 -18 228 265 0 0 chr5 131080715 131080764 -72004768 + CT-rich Low_complexity Low_complexity 2 50 0 370 338 13 13 chr5 131081568 131081719 -72003813 + MIR3 SINE MIR 39 189 -19 2643 246 61 48 chr5 131081770 131082730 -72002802 - L1ME1 LINE L1 -5 6161 5192 1873 275 56 80 chr5 131082708 131083718 -72001814 - L1M4 LINE L1 -802 5344 4359 * 2930 208 39 4 chr5 131083752 131084931 -72000601 - L1MB8 LINE L1 -229 5949 4737 426 278 57 31 chr5 131084940 131085134 -72000398 - L1M4 LINE L1 -1850 4296 4098 708 314 65 8 chr5 131085461 131085709 -71999823 + MIR SINE MIR 1 262 0 309 26 0 0 chr5 131087090 131087128 -71998404 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr5 131089047 131089069 -71996463 + AT_rich Low_complexity Low_complexity 1 22 0 241 352 70 26 chr5 131089373 131089600 -71995932 + L2 LINE L2 2465 2701 -613 182 341 32 92 chr5 131089712 131089841 -71995691 + L2 LINE L2 2835 2947 -325 2017 144 7 0 chr5 131089841 131090146 -71995386 - AluSx SINE Alu -5 307 1 182 341 32 92 chr5 131090146 131090233 -71995299 + L2 LINE L2 2947 3038 -234 249 288 15 0 chr5 131090590 131090656 -71994876 + MIR SINE MIR 196 262 0 894 205 37 11 chr5 131092003 131092193 -71993339 + MLT1A1 LTR MaLR 1 195 -170 4504 189 28 28 chr5 131092193 131093207 -71992325 + L1MA9 LINE L1 5261 6274 -38 624 287 88 82 chr5 131093425 131094310 -71991222 + L1M4 LINE L1 4298 5208 -938 2044 230 42 65 chr5 131094889 131095506 -71990026 + MER77 LTR ERV1 1 603 -2 474 68 34 11 chr5 131095672 131095760 -71989772 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 252 311 61 66 chr5 131096005 131096217 -71989315 + MIR SINE MIR 6 216 -46 741 219 0 0 chr5 131096629 131096766 -71988766 - FLAM_C SINE Alu -6 137 1 229 200 0 20 chr5 131098210 131098260 -71987272 + CT-rich Low_complexity Low_complexity 3 51 0 287 176 0 15 chr5 131098260 131098328 -71987204 + C-rich Low_complexity Low_complexity 5 71 0 498 341 103 13 chr5 131099184 131099568 -71985964 + MLT1J1 LTR MaLR 1 375 -71 1303 170 59 28 chr5 131099641 131099929 -71985603 + L1MC/D LINE L1 5463 5759 -585 271 104 164 45 chr5 131099964 131100031 -71985501 + L1MC2 LINE L1 5715 5789 -544 321 146 55 0 chr5 131100070 131100125 -71985407 + L1MC2 LINE L1 5775 5832 -512 1262 135 16 48 chr5 131100130 131100382 -71985150 + L1MA4A LINE L1 4355 4598 -1548 * 2854 162 48 10 chr5 131100374 131101241 -71984291 + L1MA4A LINE L1 4930 5828 -475 1280 206 11 39 chr5 131101251 131101537 -71983995 + AluJo SINE Alu 11 288 -24 2386 158 38 6 chr5 131101537 131102012 -71983520 + L1MA4A LINE L1 5814 6303 0 2153 189 43 19 chr5 131102053 131102567 -71982965 + L1MC2 LINE L1 5816 6341 -3 2431 51 0 0 chr5 131102567 131102860 -71982672 - AluY SINE Alu -18 293 1 4961 110 23 57 chr5 131103103 131104548 -71980984 + pTR5 LTR ERV1 743 2438 0 228 348 56 0 chr5 131104809 131104898 -71980634 - MIR SINE MIR -148 114 21 296 254 0 15 chr5 131106012 131106079 -71979453 + GA-rich Low_complexity Low_complexity 3 68 0 4361 56 13 0 chr5 131108101 131108651 -71976881 + L1PA7 LINE L1 5460 6016 -138 188 318 30 0 chr5 131110199 131110265 -71975267 + MIR3 SINE MIR 130 197 -11 476 328 53 15 chr5 131113472 131113734 -71971798 + Charlie8 DNA MER1_type 3 274 -2143 281 230 173 12 chr5 131114218 131114290 -71971242 + L1ME1 LINE L1 1144 1203 -5443 1318 207 32 45 chr5 131114290 131114604 -71970928 + AluJo SINE Alu 1 310 -2 281 230 173 12 chr5 131114604 131114797 -71970735 + L1ME1 LINE L1 1203 1563 -5083 227 278 239 17 chr5 131114934 131115110 -71970422 + L1ME1 LINE L1 2292 2506 -4319 38 93 0 0 chr5 131115114 131115222 -71970310 + AT_rich Low_complexity Low_complexity 1 108 0 1801 231 101 57 chr5 131115232 131116270 -71969262 + L1ME1 LINE L1 2602 3652 -2992 515 262 38 66 chr5 131116405 131116588 -71968944 - MIR SINE MIR -68 194 17 380 256 80 16 chr5 131116929 131117054 -71968478 + L1ME1 LINE L1 3689 3821 -2823 1265 265 32 0 chr5 131117059 131117437 -71968095 + L1ME1 LINE L1 4954 5343 -1301 366 241 8 30 chr5 131117441 131117574 -71967958 + (TA)n Simple_repeat Simple_repeat 1 130 0 267 31 0 0 chr5 131117588 131117620 -71967912 + (TG)n Simple_repeat Simple_repeat 1 32 0 2613 239 86 36 chr5 131117632 131118905 -71966627 + L1ME1 LINE L1 5335 6660 -4 430 275 11 26 chr5 131118922 131119111 -71966421 + L1M4 LINE L1 2429 2614 -3532 238 289 62 0 chr5 131119091 131119188 -71966344 + L1ME2 LINE L1 6037 6139 -25 * 22 0 0 0 chr5 131119722 131119744 -71965788 + AT_rich Low_complexity Low_complexity 1 22 0 253 269 154 19 chr5 131119849 131119953 -71965579 - L2 LINE L2 -37 3276 3159 457 259 76 21 chr5 131120846 131121108 -71964424 - LTR41 LTR ERVL 0 766 459 733 229 23 23 chr5 131121217 131121392 -71964140 - LTR41 LTR ERVL -594 179 5 443 301 126 57 chr5 131121619 131121869 -71963663 + HAL1 LINE L1 1863 2094 -413 1901 195 59 66 chr5 131121869 131122427 -71963105 + MLT2B3 LTR ERVL 1 554 0 443 301 126 57 chr5 131122427 131122789 -71962743 + HAL1 LINE L1 2094 2505 -2 1618 243 110 23 chr5 131123627 131124565 -71960967 + MER69 DNA AcHobo 9 2481 -45 342 335 47 12 chr5 131125441 131125611 -71959921 + HAL1b LINE L1 278 453 -895 2120 110 0 7 chr5 131125746 131126038 -71959494 - AluSx SINE Alu -22 290 1 575 262 128 35 chr5 131126167 131126533 -71958999 + HAL1b LINE L1 760 1159 -189 1192 279 137 18 chr5 131126641 131127196 -71958336 - L1ME3A LINE L1 -41 6129 5509 21 71 0 0 chr5 131127747 131127789 -71957743 + AT_rich Low_complexity Low_complexity 1 42 0 5093 170 26 16 chr5 131127880 131128938 -71956594 - L1MA8 LINE L1 -6 6285 5217 12078 225 38 49 chr5 131129111 131131212 -71954320 - L1PA16 LINE L1 -1 6868 4744 333 68 0 0 chr5 131131212 131131256 -71954276 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 2112 125 0 0 chr5 131131259 131131548 -71953984 - AluSg SINE Alu -21 289 1 12078 225 38 49 chr5 131131548 131134442 -71951090 - L1PA16 LINE L1 -2127 4742 1924 778 230 21 58 chr5 131135109 131135300 -71950232 + MER5A DNA MER1_type 1 184 -5 359 273 57 11 chr5 131135318 131135406 -71950126 + L2 LINE L2 3189 3280 -33 463 350 31 10 chr5 131135457 131135651 -71949881 - MIR SINE MIR 0 262 65 528 234 529 3 chr5 131137622 131137917 -71947615 + MLT1E1 LTR MaLR 31 480 -174 346 293 224 5 chr5 131138492 131138697 -71946835 + L3 LINE CR1 1239 1488 -89 265 318 0 0 chr5 131138750 131138816 -71946716 + L2 LINE L2 3248 3313 0 384 303 30 30 chr5 131140353 131140485 -71945047 + LTR16A LTR ERVL 151 282 -168 270 81 0 0 chr5 131141104 131141141 -71944391 + (TG)n Simple_repeat Simple_repeat 2 38 0 229 220 40 30 chr5 131141156 131141256 -71944276 - L1MC4 LINE L1 -1323 6719 6619 316 198 22 33 chr5 131141259 131141350 -71944182 - L1MC4 LINE L1 -1339 6703 6614 263 96 11 64 chr5 131141356 131141450 -71944082 + (TA)n Simple_repeat Simple_repeat 2 90 0 1307 226 56 46 chr5 131141455 131141848 -71943684 + L1MC4 LINE L1 6614 7010 -1032 821 288 24 16 chr5 131142158 131142408 -71943124 + MERVL LTR ERVL 4084 4335 -1150 571 299 20 63 chr5 131143044 131143232 -71942300 - MIR SINE MIR 0 262 86 701 261 27 0 chr5 131143232 131143416 -71942116 - MER5A DNA MER1_type 0 189 1 571 299 20 63 chr5 131143416 131143481 -71942051 - MIR SINE MIR -176 86 20 1045 211 51 94 chr5 131144687 131145155 -71940377 + LTR37B LTR ERV1 18 465 -3 243 286 104 55 chr5 131145855 131146037 -71939495 - L2 LINE L2 -128 3185 2995 3688 144 42 66 chr5 131146045 131146849 -71938683 + LTR1 LTR ERV1 1 785 0 539 229 53 35 chr5 131147212 131147382 -71938150 - MER5B DNA MER1_type -3 175 3 2048 135 140 11 chr5 131147638 131148017 -71937515 - MSTA LTR MaLR 0 428 1 551 348 26 7 chr5 131148027 131148337 -71937195 - HAL1 LINE L1 -695 1812 1497 455 315 94 58 chr5 131148349 131148847 -71936685 - HAL1 LINE L1 -1291 1216 701 245 138 35 17 chr5 131149024 131149082 -71936450 - HAL1 LINE L1 -2138 369 311 2274 108 0 0 chr5 131149689 131149995 -71935537 - AluSg SINE Alu -4 306 1 288 257 50 0 chr5 131150633 131150734 -71934798 + MIR SINE MIR 123 228 -34 218 243 71 29 chr5 131151394 131151464 -71934068 + MER5A DNA MER1_type 112 184 -5 530 286 46 15 chr5 131152287 131152483 -71933049 + MER58A DNA MER1_type 18 219 -5 435 268 159 23 chr5 131152488 131152643 -71932889 + MLT1K LTR MaLR 337 532 -56 197 62 0 31 chr5 131152643 131152675 -71932857 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 435 268 159 23 chr5 131152675 131152739 -71932793 + MLT1K LTR MaLR 532 586 -2 225 329 76 0 chr5 131153126 131153205 -71932327 + L2 LINE L2 3227 3311 -2 2028 206 24 71 chr5 131154024 131154603 -71930929 - MLT2B3 LTR ERVL 0 554 3 424 239 0 0 chr5 131154746 131154859 -71930673 + L1PB4 LINE L1 6044 6156 0 1709 262 49 30 chr5 131154859 131155390 -71930142 - MLT1E LTR MaLR -38 555 15 1723 173 18 0 chr5 131155674 131155951 -71929581 + MER1B DNA MER1_type 1 282 -57 692 349 78 28 chr5 131156015 131156695 -71928837 + L2 LINE L2 1798 2511 -803 1769 209 45 57 chr5 131156814 131157322 -71928210 + MLT1D LTR MaLR 4 505 0 2120 229 104 36 chr5 131157703 131158009 -71927523 + L1MC4a LINE L1 1824 2108 -4318 2093 125 0 0 chr5 131158009 131158298 -71927234 + AluSx SINE Alu 11 299 -13 2120 229 104 36 chr5 131158298 131159235 -71926297 + L1MC4a LINE L1 2108 3163 -3263 2605 115 3 0 chr5 131159235 131159609 -71925923 + THE1C LTR MaLR 1 375 0 2120 229 104 36 chr5 131159609 131159674 -71925858 + L1MC4a LINE L1 3163 3222 -3204 2246 173 8 10 chr5 131159685 131160084 -71925448 + MER57A LTR ERV1 1 398 -5 2771 235 105 78 chr5 131160095 131160642 -71924890 + L1MC4a LINE L1 3229 3760 -2666 364 232 73 0 chr5 131160642 131160724 -71924808 + AluJ/FLAM SINE Alu 1 88 -214 2771 235 105 78 chr5 131160724 131161595 -71923937 + L1MC4a LINE L1 3760 4768 -1658 1286 137 0 31 chr5 131211883 131212109 -71873423 + L1PA13 LINE L1 5941 6159 -4 299 228 0 43 chr5 131212181 131212273 -71873259 + (TG)n Simple_repeat Simple_repeat 2 89 0 963 305 91 51 chr5 131213929 131214595 -71870937 + L2 LINE L2 2620 3313 0 706 297 115 43 chr5 131214996 131215440 -71870092 + L2 LINE L2 2543 3057 -256 2120 133 0 9 chr5 131215440 131215755 -71869777 - AluSx SINE Alu 0 312 1 706 297 115 43 chr5 131215755 131215856 -71869676 + L2 LINE L2 3057 3149 -164 213 121 0 0 chr5 131217505 131217538 -71867994 + (CA)n Simple_repeat Simple_repeat 1 33 0 283 335 64 46 chr5 131220312 131220530 -71865002 + MIR SINE MIR 36 257 -5 291 71 0 0 chr5 131220702 131220744 -71864788 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 337 20 0 chr5 131221067 131221168 -71864364 - L2 LINE L2 -56 3257 3155 250 322 44 11 chr5 131221159 131221249 -71864283 + MIR3 SINE MIR 70 162 -46 * 232 282 55 24 chr5 131221291 131221546 -71863986 + L1MC4a LINE L1 5259 5521 -905 500 309 37 48 chr5 131221669 131222102 -71863430 + L1MC4a LINE L1 5690 6117 -1971 23 33 0 0 chr5 131222113 131222143 -71863389 + AT_rich Low_complexity Low_complexity 1 30 0 3173 32 0 0 chr5 131222143 131222522 -71863010 - L1PA5 LINE L1 -13 6141 5763 407 0 0 0 chr5 131222523 131222570 -71862962 + L1PA5 LINE L1 5730 5776 -379 23 0 0 0 chr5 131222570 131222593 -71862939 + AT_rich Low_complexity Low_complexity 1 23 0 303 28 0 0 chr5 131222607 131222643 -71862889 + (TG)n Simple_repeat Simple_repeat 2 37 0 526 274 66 74 chr5 131223147 131223541 -71861991 + L1MC/D LINE L1 5356 5746 -2062 864 269 121 29 chr5 131223765 131224111 -71861421 + LTR16A1 LTR ERVL 8 385 -72 389 363 48 16 chr5 131224324 131224575 -71860957 + HERV16 LTR ERVL 716 974 -4022 23 0 0 0 chr5 131224589 131224612 -71860920 + AT_rich Low_complexity Low_complexity 1 23 0 428 341 120 42 chr5 131224834 131225118 -71860414 + HERV16 LTR ERVL 1267 1572 -3424 330 352 50 60 chr5 131225632 131225933 -71859599 + L2 LINE L2 2595 2892 -422 232 242 45 15 chr5 131226382 131226448 -71859084 + L2 LINE L2 3201 3268 -4 608 218 92 50 chr5 131226710 131227013 -71858519 - L1MC5 LINE L1 -35 7926 7611 1234 193 38 100 chr5 131227728 131228127 -71857405 + MLT1A2 LTR MaLR 1 374 0 271 319 78 21 chr5 131228299 131228440 -71857092 + MIR3 SINE MIR 32 180 -28 216 277 128 0 chr5 131229228 131229322 -71856210 - MIR SINE MIR -75 187 82 223 356 14 14 chr5 131229428 131229501 -71856031 - L2 LINE L2 -4 3268 3196 192 77 0 0 chr5 131230499 131230525 -71855007 + (CA)n Simple_repeat Simple_repeat 2 27 0 3540 62 0 0 chr5 131230530 131230983 -71854549 - L1PA5 LINE L1 -3 6151 5699 348 24 0 0 chr5 131230983 131231024 -71854508 + (CA)n Simple_repeat Simple_repeat 2 42 0 11099 212 61 13 chr5 131231250 131234848 -71850684 + L1MA4A LINE L1 223 3996 -2852 5630 181 75 29 chr5 131234841 131237140 -71848392 + L1MA4A LINE L1 4584 6999 -6 * 252 285 15 80 chr5 131239084 131239221 -71846311 - MER20 DNA MER1_type -91 128 1 2143 127 0 10 chr5 131239308 131239615 -71845917 + AluSg SINE Alu 1 304 -6 345 325 50 22 chr5 131240238 131240595 -71844937 + L1MC5 LINE L1 4462 4828 -1318 1290 258 102 83 chr5 131241047 131243560 -71841972 + L1MC5 LINE L1 5344 7907 -54 387 0 0 0 chr5 131244234 131244277 -71841255 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr5 131246069 131246104 -71839428 + AT_rich Low_complexity Low_complexity 1 35 0 236 257 0 71 chr5 131246765 131246835 -71838697 - Charlie8 DNA MER1_type -10 2407 2343 238 186 23 93 chr5 131246987 131247056 -71838476 - Charlie8 DNA MER1_type -180 150 87 1825 146 24 63 chr5 131247056 131247265 -71838267 - MLT1A1 LTR MaLR -2 363 173 1978 120 0 34 chr5 131247265 131247587 -71837945 - AluSg SINE Alu 0 312 1 1825 146 24 63 chr5 131247587 131247754 -71837778 - MLT1A1 LTR MaLR -192 173 1 238 186 23 93 chr5 131247754 131247770 -71837762 - Charlie8 DNA MER1_type -243 87 71 2558 121 13 0 chr5 131247975 131248363 -71837169 - L1PA13 LINE L1 0 6163 5771 2121 145 3 9 chr5 131248363 131248704 -71836828 - L1PA10 LINE L1 -16 6152 5810 222 128 0 0 chr5 131249070 131249109 -71836423 + (T)n Simple_repeat Simple_repeat 1 39 0 30 27 0 0 chr5 131250315 131250352 -71835180 + AT_rich Low_complexity Low_complexity 1 37 0 7357 44 0 2 chr5 131250509 131251504 -71834028 + L1PA5 LINE L1 5162 6154 0 329 250 161 0 chr5 131251506 131251618 -71833914 - MER104 DNA Tc2 -41 139 10 561 296 127 53 chr5 131252463 131252936 -71832596 + L2 LINE L2 2257 2764 -550 569 231 46 0 chr5 131252945 131253075 -71832457 + MIR SINE MIR 98 233 -29 347 342 160 4 chr5 131253134 131253415 -71832117 + L2 LINE L2 2810 3134 -179 531 253 76 0 chr5 131253481 131253639 -71831893 + MIR SINE MIR 74 243 -19 5485 210 71 38 chr5 131255691 131257753 -71827779 + L1MDa LINE L1 31 2394 -4146 1416 66 15 0 chr5 131257752 131257950 -71827582 - L1PA7 LINE L1 -677 5477 5277 * 5347 61 0 0 chr5 131257950 131258617 -71826915 + L1PA7 LINE L1 5479 6149 -5 5002 225 41 28 chr5 131258622 131260534 -71824998 + L1MDa LINE L1 2390 4324 -2216 1876 140 0 0 chr5 131261416 131261673 -71823859 - AluSx SINE Alu -55 257 1 200 320 184 7 chr5 131262111 131262258 -71823274 - L2 LINE L2 0 3313 3141 340 267 114 0 chr5 131262554 131262659 -71822873 - L2 LINE L2 -1 3312 3196 345 272 59 0 chr5 131265166 131265335 -71820197 - MER104 DNA MER2_type -1 179 1 1354 217 25 68 chr5 131265456 131265898 -71819634 - L1ME3A LINE L1 -9 6161 5739 10186 38 3 124 chr5 131265997 131267594 -71817938 + SVA Other Other 1 1386 0 444 143 0 0 chr5 131267632 131267716 -71817816 + (TC)n Simple_repeat Simple_repeat 1 84 0 858 201 34 54 chr5 131267723 131267927 -71817605 + MLT1B LTR MaLR 191 390 0 275 290 53 50 chr5 131268080 131268294 -71817238 - L2 LINE L2 -286 2986 2775 322 349 89 21 chr5 131268310 131268545 -71816987 - L2 LINE L2 -812 2502 2252 805 157 122 0 chr5 131268586 131268758 -71816774 - Charlie1 DNA MER1_type 0 2761 2569 1640 163 3 31 chr5 131269184 131269517 -71816015 + AluJo SINE Alu 2 326 0 398 264 33 0 chr5 131269943 131270034 -71815498 + MIR SINE MIR 90 183 -79 15992 209 40 27 chr5 131270348 131275985 -71809547 - L1PA15 LINE L1 -6 6810 1110 270 116 0 0 chr5 131276839 131276882 -71808650 + (CA)n Simple_repeat Simple_repeat 2 44 0 1576 145 87 48 chr5 131276892 131277250 -71808282 + THE1C LTR MaLR 2 373 -2 308 314 51 8 chr5 131277275 131277393 -71808139 - MIR SINE MIR -119 143 21 315 290 93 0 chr5 131278938 131279045 -71806487 - MIR SINE MIR -109 153 37 640 300 16 25 chr5 131282724 131282941 -71802591 - MIR SINE MIR -48 214 3 239 227 40 27 chr5 131283263 131283338 -71802194 + Charlie8 DNA MER1_type 131 206 -2211 879 299 91 8 chr5 131283554 131283905 -71801627 + MLT1I LTR MaLR 1 380 -29 206 125 0 25 chr5 131284064 131284104 -71801428 + (GGA)n Simple_repeat Simple_repeat 3 41 0 272 346 83 45 chr5 131284260 131284338 -71801194 - MIR3 SINE MIR -14 194 120 536 196 55 104 chr5 131284338 131284558 -71800974 + MER3 DNA MER1_type 1 209 0 272 346 83 45 chr5 131284558 131284635 -71800897 - MIR3 SINE MIR -88 120 33 197 250 236 2 chr5 131285204 131285359 -71800173 - MIR SINE MIR -15 247 24 221 402 37 6 chr5 131285371 131285535 -71799997 + MIR3 SINE MIR 3 171 -37 * 332 268 88 50 chr5 131285534 131285744 -71799788 + MIR SINE MIR 17 238 -24 1197 28 0 0 chr5 131286523 131286664 -71798868 + L1PA4 LINE L1 6009 6149 -6 3144 239 57 28 chr5 131286681 131287993 -71797539 + L1ME1 LINE L1 4589 5940 -226 2664 102 11 3 chr5 131287993 131288365 -71797167 + THE1C LTR MaLR 1 375 0 3144 239 57 28 chr5 131288365 131288594 -71796938 + L1ME1 LINE L1 5940 6161 -5 322 160 13 13 chr5 131288807 131288882 -71796650 + GA-rich Low_complexity Low_complexity 4 78 0 347 259 102 35 chr5 131288986 131289299 -71796233 + L1MC4a LINE L1 5546 5634 -487 343 336 0 0 chr5 131289846 131289950 -71795582 - MERVL LTR ERVL -876 4609 4506 1136 309 108 46 chr5 131289955 131291010 -71794522 - MERVL LTR ERVL -1179 4306 3199 218 175 50 0 chr5 131291375 131291455 -71794077 + (TA)n Simple_repeat Simple_repeat 1 84 0 213 189 0 68 chr5 131291496 131291570 -71793962 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 23 92 0 0 chr5 131291689 131291754 -71793778 + AT_rich Low_complexity Low_complexity 1 65 0 23 54 0 0 chr5 131293883 131293920 -71791612 + AT_rich Low_complexity Low_complexity 1 37 0 1477 124 8 0 chr5 131294100 131294342 -71791190 - L1MA4A LINE L1 -5 6298 6055 1473 188 54 48 chr5 131294352 131294725 -71790807 + THE1C LTR MaLR 1 375 0 1271 200 5 15 chr5 131294728 131295114 -71790418 + THE1C-int LTR MaLR 4 499 -1152 * 2159 133 8 38 chr5 131295111 131295480 -71790052 + THE1C-int LTR MaLR 783 1140 -440 408 282 70 51 chr5 131295480 131295753 -71789779 - L1ME LINE L1 -463 5658 5381 329 331 74 28 chr5 131295757 131296083 -71789449 - L1ME LINE L1 -801 5345 5005 786 190 0 32 chr5 131296306 131296464 -71789068 + L1MB1 LINE L1 5740 5892 -297 8809 132 33 4 chr5 131296464 131297877 -71787655 + Tigger1 DNA MER2_type 337 1790 -628 5554 218 49 32 chr5 131298080 131299317 -71786215 - L1MC2 LINE L1 -8 6336 5122 2272 168 28 19 chr5 131299317 131299739 -71785793 - MSTB LTR MaLR 0 426 1 5554 218 49 32 chr5 131299739 131301259 -71784273 - L1MC2 LINE L1 -1222 5122 3545 1945 158 0 3 chr5 131301281 131301579 -71783953 - AluSx SINE Alu -13 299 3 398 325 99 74 chr5 131301654 131302100 -71783432 - HAL1 LINE L1 -795 1712 1256 427 336 36 0 chr5 131303548 131303685 -71781847 - L2 LINE L2 -2 3311 3170 684 233 20 0 chr5 131303703 131303853 -71781679 + MER58B DNA MER1_type 189 341 0 192 182 0 0 chr5 131304094 131304138 -71781394 + (CAATA)n Simple_repeat Simple_repeat 5 48 0 262 299 179 28 chr5 131304158 131304586 -71780946 - L2 LINE L2 -447 2867 2290 1885 132 0 42 chr5 131304764 131305074 -71780458 - AluSc SINE Alu -12 297 1 248 261 0 29 chr5 131306735 131306804 -71778728 + L1ME4a LINE L1 5979 6045 -76 781 187 5 70 chr5 131306807 131306994 -71778538 - AluSg/x SINE Alu -18 292 118 257 208 0 0 chr5 131307179 131307227 -71778305 + L1MC5 LINE L1 7853 7900 -61 2123 148 16 24 chr5 131307393 131307771 -71777761 - THE1C LTR MaLR 0 375 1 9758 113 35 37 chr5 131307771 131309354 -71776178 - THE1C-int LTR MaLR 0 1580 2 907 122 21 79 chr5 131309356 131309395 -71776137 - THE1C LTR MaLR -2 373 333 2207 105 6 26 chr5 131309395 131309708 -71775824 + AluSq SINE Alu 3 309 -4 907 122 21 79 chr5 131309708 131309857 -71775675 - THE1C LTR MaLR -42 333 196 2961 151 71 49 chr5 131309858 131310658 -71774874 + pTR5 LTR ERV1 753 2029 -409 324 161 37 37 chr5 131310658 131310739 -71774793 + LTR30 LTR ERV1 544 624 -98 1690 67 1 4 chr5 131310739 131310976 -71774556 + pTR5 LTR ERV1 52 390 -2048 1100 181 29 14 chr5 131310976 131311186 -71774346 - THE1C LTR MaLR -162 213 1 970 236 36 33 chr5 131311522 131311798 -71773734 - HAL1 LINE L1 -699 1808 1532 995 193 86 107 chr5 131311799 131312277 -71773255 - MER4C LTR ERV1 0 465 1 425 289 48 33 chr5 131312293 131312629 -71772903 - HAL1 LINE L1 -997 1510 1170 346 214 10 68 chr5 131312634 131312737 -71772795 - HAL1 LINE L1 -1393 1114 1018 3602 222 85 16 chr5 131312737 131313734 -71771798 - L1MD2 LINE L1 -2 6617 5552 1064 248 42 11 chr5 131313742 131314097 -71771435 - L1MD2 LINE L1 -994 5412 5047 3523 223 32 36 chr5 131314100 131315355 -71770177 - L1MD2 LINE L1 -5024 1385 20 462 269 82 5 chr5 131315383 131315602 -71769930 - HAL1 LINE L1 -1485 1022 787 467 301 115 44 chr5 131315776 131316115 -71769417 - HAL1 LINE L1 -2120 387 25 2236 132 51 35 chr5 131316584 131316881 -71768651 - L1MB4 LINE L1 -1 6179 5871 2347 94 0 7 chr5 131316881 131317188 -71768344 - AluY SINE Alu -6 305 1 2236 132 51 35 chr5 131317188 131317344 -71768188 - L1MB4 LINE L1 -309 5871 5719 402 232 123 0 chr5 131317946 131318084 -71767448 + LTR37A LTR ERV1 78 232 -194 29 0 0 0 chr5 131318084 131318113 -71767419 + AT_rich Low_complexity Low_complexity 1 29 0 1091 202 119 12 chr5 131318113 131318366 -71767166 - MLT1A1 LTR MaLR -85 280 1 515 136 18 9 chr5 131318754 131318864 -71766668 + LTR37A LTR ERV1 314 424 -2 245 286 22 104 chr5 131318991 131319173 -71766359 - MIR3 SINE MIR -3 205 39 35 24 0 0 chr5 131319519 131319561 -71765971 + AT_rich Low_complexity Low_complexity 1 42 0 221 295 33 0 chr5 131320043 131320104 -71765428 - L2 LINE L2 0 3272 3210 186 118 0 0 chr5 131320531 131320565 -71764967 + (TG)n Simple_repeat Simple_repeat 2 35 0 374 270 45 0 chr5 131320624 131320735 -71764797 + L2 LINE L2 3197 3312 -1 400 337 75 50 chr5 131321402 131321964 -71763568 - L2 LINE L2 -1 3312 2741 261 0 0 0 chr5 131322196 131322225 -71763307 + (T)n Simple_repeat Simple_repeat 1 29 0 210 143 0 0 chr5 131323524 131323559 -71761973 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 180 316 51 113 chr5 131323692 131323869 -71761663 - L2 LINE L2 -1 3271 3106 229 284 227 11 chr5 131324439 131324615 -71760917 - MIR SINE MIR -21 241 28 214 228 35 0 chr5 131325146 131325203 -71760329 + (TATG)n Simple_repeat Simple_repeat 2 60 0 578 213 12 44 chr5 131325675 131325835 -71759697 + MER106B DNA MER1_type 896 1050 -9 24 0 0 0 chr5 131327120 131327144 -71758388 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 75 chr5 131329114 131329154 -71756378 + AT_rich Low_complexity Low_complexity 1 37 0 4507 132 27 5 chr5 131329482 131330233 -71755299 - L1MA4A LINE L1 -7 6296 5530 1025 198 43 32 chr5 131330843 131331121 -71754411 + L1MC2 LINE L1 6063 6343 -1 24 53 0 0 chr5 131331166 131331204 -71754328 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 131331276 131331306 -71754226 + AT_rich Low_complexity Low_complexity 1 30 0 2269 124 13 26 chr5 131331589 131331967 -71753565 - THE1C LTR MaLR -2 373 1 412 254 191 31 chr5 131332096 131332384 -71753148 - L1MC4a LINE L1 -1898 5910 5577 599 300 88 22 chr5 131334329 131334556 -71750976 - MIR SINE MIR -18 244 3 21 0 0 0 chr5 131336337 131336358 -71749174 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 131336821 131336852 -71748680 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 131338328 131338352 -71747180 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 131339929 131339952 -71745580 + (A)n Simple_repeat Simple_repeat 1 23 0 7753 19 0 0 chr5 131340195 131341219 -71744313 - L1PA2 LINE L1 -3 6152 5129 503 258 12 31 chr5 131342156 131342319 -71743213 + MER5C DNA MER1_type 1 160 -164 821 187 0 0 chr5 131342329 131342463 -71743069 + AluJo SINE Alu 1 134 -178 401 212 34 41 chr5 131342467 131342613 -71742919 + MER5C DNA MER1_type 180 324 0 1651 174 11 78 chr5 131342946 131343319 -71742213 + MER7A DNA MER2_type 1 346 0 198 0 0 0 chr5 131343684 131343706 -71741826 + (TG)n Simple_repeat Simple_repeat 2 23 0 249 190 0 17 chr5 131343708 131343766 -71741766 + L1MC4 LINE L1 6648 6704 -1338 2173 117 10 0 chr5 131345132 131345431 -71740101 + AluY SINE Alu 1 302 -9 253 344 113 53 chr5 131347353 131347504 -71738028 - MIR3 SINE MIR -30 178 19 2571 158 51 22 chr5 131348169 131348702 -71736830 + L1MB3 LINE L1 5634 6181 -2 298 311 19 0 chr5 131349634 131349740 -71735792 - MER110 LTR ERV1 -208 283 176 21 36 0 0 chr5 131350174 131350202 -71735330 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 131350647 131350671 -71734861 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 338 231 37 18 chr5 131350851 131351293 -71734239 + (TA)n Simple_repeat Simple_repeat 1 450 0 21 36 0 0 chr5 131351594 131351622 -71733910 + AT_rich Low_complexity Low_complexity 1 28 0 376 275 95 1 chr5 131351759 131351910 -71733622 + MIR SINE MIR 29 188 -37 388 311 33 49 chr5 131352050 131352233 -71733299 - MIR3 SINE MIR -2 206 27 187 281 0 35 chr5 131352445 131352502 -71733030 - L2 LINE L2 -17 3255 3201 1983 127 3 17 chr5 131353916 131354216 -71731316 + AluSx SINE Alu 2 297 -15 23 33 0 0 chr5 131356257 131356287 -71729245 + AT_rich Low_complexity Low_complexity 1 30 0 556 312 168 27 chr5 131356734 131356907 -71728625 + L3 LINE CR1 1029 1176 -401 382 78 0 223 chr5 131356907 131356967 -71728565 - MADE1 DNA Mariner 0 80 51 1801 144 7 0 chr5 131356967 131357238 -71728294 + AluSx SINE Alu 19 291 -21 382 78 0 223 chr5 131357238 131357280 -71728252 - MADE1 DNA Mariner -29 51 1 556 312 168 27 chr5 131357280 131357510 -71728022 + L3 LINE CR1 1176 1489 -88 327 340 126 6 chr5 131358256 131358415 -71727117 + MER5B DNA MER1_type 1 178 0 205 148 19 56 chr5 131359156 131359210 -71726322 + T-rich Low_complexity Low_complexity 2 53 0 226 211 0 0 chr5 131359858 131359896 -71725636 + (TG)n Simple_repeat Simple_repeat 1 38 0 24 77 0 0 chr5 131360089 131360141 -71725391 + AT_rich Low_complexity Low_complexity 1 52 0 25 31 0 0 chr5 131360770 131360802 -71724730 + AT_rich Low_complexity Low_complexity 1 32 0 349 370 165 21 chr5 131362908 131363605 -71721927 - L2 LINE L2 -700 2614 1818 318 170 170 20 chr5 131365187 131365287 -71720245 - MER94 DNA DNA -19 115 1 270 81 0 0 chr5 131366025 131366062 -71719470 + (TA)n Simple_repeat Simple_repeat 1 37 0 3611 35 18 9 chr5 131366062 131366510 -71719022 - L1PA5 LINE L1 -5 6149 5695 1188 265 42 0 chr5 131367071 131367380 -71718152 + MER58B DNA MER1_type 20 341 0 29 60 0 0 chr5 131367902 131367952 -71717580 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 131368675 131368696 -71716836 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 131368985 131369010 -71716522 + AT_rich Low_complexity Low_complexity 1 25 0 708 221 86 0 chr5 131369463 131369603 -71715929 - FAM SINE Alu -27 158 7 3601 58 0 0 chr5 131369651 131370102 -71715430 - L1PA5 LINE L1 -3 6151 5701 394 59 0 0 chr5 131372588 131372639 -71712893 - MADE1 DNA Mariner -29 51 1 546 248 257 15 chr5 131373479 131373685 -71711847 - MIR SINE MIR 0 262 7 247 220 80 43 chr5 131373652 131373817 -71711715 + MIR SINE MIR 54 262 0 * 238 299 171 0 chr5 131373931 131374048 -71711484 - L2 LINE L2 -174 3139 3003 492 135 27 0 chr5 131374150 131374261 -71711271 + (TA)n Simple_repeat Simple_repeat 1 114 0 259 200 0 17 chr5 131374294 131374354 -71711178 + L1MC4 LINE L1 6661 6719 -1323 591 321 40 24 chr5 131374393 131374645 -71710887 - L2 LINE L2 -493 2821 2566 22 0 0 0 chr5 131375411 131375433 -71710099 + AT_rich Low_complexity Low_complexity 1 22 0 1170 259 100 3 chr5 131375476 131375784 -71709748 + MLT1A1 LTR MaLR 2 405 -23 558 262 11 16 chr5 131376049 131376232 -71709300 + HAL1 LINE L1 1060 1241 -1266 254 167 0 0 chr5 131576836 131576878 -71508654 - MLT1K LTR MaLR 0 588 547 198 0 0 0 chr5 131577038 131577060 -71508472 + (CTCTG)n Simple_repeat Simple_repeat 2 23 0 180 176 0 0 chr5 131577482 131577516 -71508016 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 2787 89 33 10 chr5 131577517 131577911 -71507621 - MLT2A1 LTR ERVL -41 403 1 1442 229 54 16 chr5 131577947 131578319 -71507213 - MLT1D LTR MaLR -29 476 91 433 188 0 54 chr5 131578320 131578693 -71506839 + (TA)n Simple_repeat Simple_repeat 1 352 0 469 188 0 67 chr5 131578728 131579278 -71506254 + (TA)n Simple_repeat Simple_repeat 1 513 0 235 111 0 63 chr5 131579370 131579433 -71506099 + L1MCa LINE L1 2006 2064 -4362 200 167 0 56 chr5 131579444 131579516 -71506016 + (TA)n Simple_repeat Simple_repeat 1 68 0 344 291 36 18 chr5 131579516 131579681 -71505851 + (TATG)n Simple_repeat Simple_repeat 2 169 0 504 278 94 11 chr5 131580060 131580240 -71505292 + MER91A DNA MER1_type 1 195 -1 260 291 13 0 chr5 131580278 131580357 -71505175 + L1ME LINE L1 5565 5644 -477 668 221 38 60 chr5 131581364 131581599 -71503933 + MER74A LTR ERVL 299 528 -30 2091 123 0 32 chr5 131581627 131581943 -71503589 + AluSq SINE Alu 1 306 -7 195 318 153 39 chr5 131582901 131583156 -71502376 - L2 LINE L2 -159 3113 2830 347 263 271 49 chr5 131583365 131583715 -71501817 - L2 LINE L2 -534 2780 2353 21 0 0 0 chr5 131584924 131584945 -71500587 + AT_rich Low_complexity Low_complexity 1 21 0 297 51 0 0 chr5 131585796 131585835 -71499697 + (TG)n Simple_repeat Simple_repeat 2 40 0 328 232 100 116 chr5 131586058 131586299 -71499233 + MIR SINE MIR 20 256 -6 226 255 29 0 chr5 131587492 131587594 -71497938 + (TA)n Simple_repeat Simple_repeat 2 106 0 205 176 0 0 chr5 131588331 131588365 -71497167 + L2 LINE L2 3224 3257 -15 690 196 168 29 chr5 131588992 131589165 -71496367 - MIR SINE MIR -64 198 2 363 250 135 0 chr5 131591906 131592002 -71493530 + MIR3 SINE MIR 78 186 -22 2207 116 3 0 chr5 131592624 131592917 -71492615 + AluSc SINE Alu 1 294 -15 1094 303 68 21 chr5 131592974 131593631 -71491901 - L1MC4a LINE L1 -1747 6061 5374 929 262 76 14 chr5 131593653 131594043 -71491489 + LTR16B LTR ERVL 2 462 -2 201 196 0 22 chr5 131594846 131594892 -71490640 + CT-rich Low_complexity Low_complexity 2 46 0 222 150 0 0 chr5 131594894 131594934 -71490598 + (TA)n Simple_repeat Simple_repeat 2 41 0 310 208 0 60 chr5 131595152 131595335 -71490197 + (TA)n Simple_repeat Simple_repeat 1 172 0 349 200 0 60 chr5 131595359 131595544 -71489988 + (TA)n Simple_repeat Simple_repeat 1 174 0 303 239 9 53 chr5 131595545 131595658 -71489874 + (TATG)n Simple_repeat Simple_repeat 1 108 0 276 179 0 82 chr5 131595659 131595854 -71489678 + (TA)n Simple_repeat Simple_repeat 1 179 0 464 188 0 56 chr5 131595919 131596301 -71489231 + (TA)n Simple_repeat Simple_repeat 1 360 0 319 209 11 48 chr5 131596338 131596525 -71489007 + (TA)n Simple_repeat Simple_repeat 1 180 0 411 221 37 22 chr5 131596526 131596662 -71488870 + (TATATG)n Simple_repeat Simple_repeat 3 140 0 361 187 22 50 chr5 131596673 131596855 -71488677 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 378 191 4 60 chr5 131596878 131597423 -71488109 + (TA)n Simple_repeat Simple_repeat 1 514 0 439 255 0 54 chr5 131597425 131597609 -71487923 + (TATG)n Simple_repeat Simple_repeat 3 176 0 439 255 0 54 chr5 131597629 131597813 -71487719 + (TATG)n Simple_repeat Simple_repeat 3 176 0 439 255 0 54 chr5 131597833 131598017 -71487515 + (TATG)n Simple_repeat Simple_repeat 3 176 0 506 191 5 88 chr5 131598037 131598231 -71487301 + (TATG)n Simple_repeat Simple_repeat 3 180 0 379 166 5 72 chr5 131598337 131598530 -71487002 + (TA)n Simple_repeat Simple_repeat 1 180 0 353 151 10 73 chr5 131598551 131598743 -71486789 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 228 43 33 chr5 131598743 131598835 -71486697 + L1MC4 LINE L1 6613 6705 -1337 242 123 27 27 chr5 131598835 131598908 -71486624 + (TA)n Simple_repeat Simple_repeat 2 74 0 308 295 0 57 chr5 131598914 131599036 -71486496 + L1MC4 LINE L1 6589 6703 -1339 45 19 0 0 chr5 131599036 131599088 -71486444 + AT_rich Low_complexity Low_complexity 1 52 0 662 138 23 0 chr5 131599088 131599262 -71486270 + (TA)n Simple_repeat Simple_repeat 2 179 0 25 75 0 0 chr5 131599268 131599321 -71486211 + AT_rich Low_complexity Low_complexity 1 53 0 524 137 35 12 chr5 131599329 131599593 -71485939 + (TA)n Simple_repeat Simple_repeat 1 270 0 276 227 0 0 chr5 131599619 131599795 -71485737 + (TA)n Simple_repeat Simple_repeat 1 176 0 25 0 0 0 chr5 131599802 131599827 -71485705 + AT_rich Low_complexity Low_complexity 1 25 0 306 250 35 60 chr5 131599827 131599943 -71485589 + L1MC4 LINE L1 6613 6725 -1317 435 182 0 0 chr5 131599943 131600064 -71485468 + (TA)n Simple_repeat Simple_repeat 1 121 0 213 286 0 0 chr5 131600091 131600147 -71485385 + (CAT)n Simple_repeat Simple_repeat 1 56 0 182 342 108 17 chr5 131601288 131601408 -71484124 + MIR SINE MIR 12 142 -120 986 271 133 69 chr5 131601428 131601962 -71483570 - MLT1G LTR MaLR 0 590 10 229 307 24 63 chr5 131602276 131602403 -71483129 - MIR SINE MIR -65 197 76 492 253 114 34 chr5 131603916 131604153 -71481379 - MIR SINE MIR 0 262 7 306 230 105 66 chr5 131606189 131606341 -71479191 - L1ME4a LINE L1 -3 6118 5961 699 295 6 0 chr5 131606351 131606534 -71478998 + MIR SINE MIR 78 261 -1 298 179 0 18 chr5 131606626 131606682 -71478850 - MER5A DNA MER1_type -132 57 3 298 252 151 23 chr5 131607120 131607338 -71478194 - L1ME4a LINE L1 -177 5944 5699 252 258 133 58 chr5 131608180 131608300 -71477232 + MER5B DNA MER1_type 50 178 0 25 51 0 0 chr5 131608895 131608934 -71476598 + AT_rich Low_complexity Low_complexity 1 39 0 412 269 77 44 chr5 131609572 131609754 -71475778 + MLT1J2 LTR MaLR 263 450 0 264 324 84 49 chr5 131610444 131610586 -71474946 + MIR3 SINE MIR 32 178 -30 302 91 18 0 chr5 131611256 131611311 -71474221 + (CA)n Simple_repeat Simple_repeat 2 57 0 473 268 132 60 chr5 131614854 131615089 -71470443 - MIR SINE MIR 0 262 11 333 312 64 0 chr5 131616068 131616177 -71469355 - MIR3 SINE MIR -9 199 84 307 217 0 0 chr5 131616378 131616447 -71469085 + L1MC4 LINE L1 6641 6709 -1333 279 93 0 0 chr5 131617828 131617871 -71467661 + (TA)n Simple_repeat Simple_repeat 2 44 0 27 49 0 0 chr5 131618054 131618095 -71467437 + AT_rich Low_complexity Low_complexity 1 41 0 609 255 27 54 chr5 131618239 131618423 -71467109 - MER97a DNA MER1_type? -715 179 1 436 330 73 11 chr5 131618484 131618675 -71466857 - MARNA DNA Mariner -277 309 107 655 288 80 50 chr5 131618696 131619057 -71466475 - MLT1I LTR MaLR -35 374 3 233 273 18 45 chr5 131619057 131619159 -71466373 + MARNA DNA Mariner 479 577 -9 188 0 0 69 chr5 131619204 131619233 -71466299 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1325 183 8 37 chr5 131619236 131619504 -71466028 - AluJb SINE Alu -52 260 1 441 247 126 42 chr5 131619641 131619831 -71465701 - MIR SINE MIR -32 230 25 313 242 40 89 chr5 131619931 131620055 -71465477 + L2 LINE L2 3193 3310 -3 390 85 0 0 chr5 131620526 131620585 -71464947 + (CA)n Simple_repeat Simple_repeat 2 60 0 358 83 95 0 chr5 131622396 131622457 -71463075 + MLT2A2 LTR ERVL 1 67 -377 24940 76 2 4 chr5 131622457 131625643 -71459889 + HERVL-A2 LTR ERVL 2475 5654 0 2091 164 59 24 chr5 131625643 131626155 -71459377 + MLT2A2 LTR ERVL 1 554 0 2510 85 0 0 chr5 131626176 131626483 -71459049 - AluSx SINE Alu -3 309 3 24 32 0 0 chr5 131626635 131626666 -71458866 + AT_rich Low_complexity Low_complexity 1 31 0 929 227 28 23 chr5 131626688 131626904 -71458628 - MER58 DNA MER1_type -124 217 1 244 262 83 12 chr5 131626966 131627050 -71458482 - MARNA DNA Mariner -390 196 107 186 303 141 10 chr5 131627087 131627186 -71458346 + L2 LINE L2 3199 3310 -3 224 224 17 17 chr5 131627802 131627860 -71457672 + CT-rich Low_complexity Low_complexity 2 59 0 381 43 0 0 chr5 131627866 131627913 -71457619 + (CA)n Simple_repeat Simple_repeat 2 48 0 362 304 30 15 chr5 131628384 131628519 -71457013 + L2 LINE L2 2614 2750 -564 357 265 87 27 chr5 131628584 131628769 -71456763 + LTR33 LTR ERVL 56 251 -270 259 336 85 29 chr5 131628930 131629178 -71456354 + L2 LINE L2 2790 3049 -223 1046 111 19 102 chr5 131629282 131629498 -71456034 - L1PA13 LINE L1 -8 6155 5958 1484 136 1 0 chr5 131629598 131629861 -71455671 - L1PA12 LINE L1 -264 5904 5640 190 354 0 0 chr5 131629868 131629933 -71455599 + L2 LINE L2 3172 3236 -36 24 32 0 0 chr5 131630084 131630115 -71455417 + AT_rich Low_complexity Low_complexity 1 31 0 235 381 12 0 chr5 131630125 131630209 -71455323 - L2 LINE L2 -51 3221 3137 266 247 59 0 chr5 131631161 131631246 -71454286 - MIR SINE MIR -82 126 37 2541 68 0 0 chr5 131632336 131632647 -71452885 - AluY SINE Alu 0 311 1 250 164 49 0 chr5 131634176 131634237 -71451295 + CT-rich Low_complexity Low_complexity 1 64 0 390 129 0 0 chr5 131634240 131634302 -71451230 + (CA)n Simple_repeat Simple_repeat 1 62 0 1649 232 48 28 chr5 131634358 131634853 -71450679 - MLT1D LTR MaLR 0 505 1 411 279 9 9 chr5 131635281 131635392 -71450140 + MIR SINE MIR 13 123 -139 22 0 0 0 chr5 131636431 131636453 -71449079 + AT_rich Low_complexity Low_complexity 1 22 0 7208 36 0 1 chr5 131638232 131639132 -71446400 - L1PA5 LINE L1 -2 6152 5254 253 268 71 9 chr5 131639937 131640049 -71445483 + Charlie2 DNA MER1_type 92 210 -2572 1408 232 40 42 chr5 131640129 131640702 -71444830 + Charlie2 DNA MER1_type 2230 2801 -61 2308 125 45 8 chr5 131641654 131642030 -71443502 + MLT1B LTR MaLR 1 390 0 874 271 165 28 chr5 131642705 131642846 -71442686 - L2 LINE L2 0 3313 3193 405 86 0 0 chr5 131642846 131642904 -71442628 + (TA)n Simple_repeat Simple_repeat 2 59 0 874 271 165 28 chr5 131642904 131643198 -71442334 - L2 LINE L2 -120 3193 2818 192 125 0 0 chr5 131643367 131643399 -71442133 + (TA)n Simple_repeat Simple_repeat 2 33 0 615 252 83 81 chr5 131644064 131644461 -71441071 - MLT1I LTR MaLR -11 398 1 235 217 36 36 chr5 131644470 131644553 -71440979 + CT-rich Low_complexity Low_complexity 4 86 0 180 0 0 0 chr5 131645131 131645151 -71440381 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr5 131645814 131645843 -71439689 + AT_rich Low_complexity Low_complexity 1 29 0 1669 167 0 38 chr5 131645843 131646168 -71439364 - AluJo SINE Alu 0 314 1 24 32 0 0 chr5 131646641 131646672 -71438860 + AT_rich Low_complexity Low_complexity 1 31 0 387 250 114 8 chr5 131648929 131649061 -71436471 - MER103 DNA DNA -2 164 19 2614 55 0 0 chr5 131649165 131649472 -71436060 + AluY SINE Alu 1 307 -4 197 200 50 33 chr5 131649675 131649735 -71435797 - MIR SINE MIR -47 215 155 244 321 0 0 chr5 131650011 131650067 -71435465 + MER119 DNA MER1_type 2 57 -526 762 170 21 43 chr5 131650068 131650256 -71435276 + MER119 DNA MER1_type 400 583 0 266 282 55 55 chr5 131651287 131651397 -71434135 - MIR3 SINE MIR -17 191 82 730 153 0 46 chr5 131651472 131651603 -71433929 - FLAM_C SINE Alu -18 125 1 307 254 0 14 chr5 131652322 131652393 -71433139 + MIR SINE MIR 193 262 0 904 293 41 8 chr5 131652472 131652718 -71432814 - MIR SINE MIR 0 262 9 23 54 0 0 chr5 131652891 131652928 -71432604 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr5 131653033 131653058 -71432474 + AT_rich Low_complexity Low_complexity 1 25 0 2381 99 0 10 chr5 131653355 131653668 -71431864 - AluSx SINE Alu 0 312 3 2100 90 0 4 chr5 131654249 131654527 -71431005 - AluSc SINE Alu -13 296 20 548 295 16 85 chr5 131654974 131655232 -71430300 + MIR SINE MIR 2 241 -21 22 35 0 0 chr5 131655551 131655580 -71429952 + AT_rich Low_complexity Low_complexity 1 29 0 195 69 0 0 chr5 131655722 131655751 -71429781 + (CAGCC)n Simple_repeat Simple_repeat 1 29 0 346 374 0 0 chr5 131656196 131656295 -71429237 - L2 LINE L2 -37 3235 3137 580 194 88 77 chr5 131656400 131656570 -71428962 + MER5B DNA MER1_type 7 178 0 334 282 92 66 chr5 131658798 131659025 -71426507 - MIR SINE MIR -10 252 20 10292 36 8 13 chr5 131661985 131663330 -71422202 - L1PA4 LINE L1 -855 5291 3953 7103 35 6 1 chr5 131663330 131664191 -71421341 + L1PA4 LINE L1 5289 6155 0 203 130 43 0 chr5 131664306 131664352 -71421180 + (TA)n Simple_repeat Simple_repeat 2 49 0 198 71 0 0 chr5 131664489 131664517 -71421015 + (TATG)n Simple_repeat Simple_repeat 2 29 0 420 20 0 0 chr5 131665121 131665170 -71420362 + (CA)n Simple_repeat Simple_repeat 1 49 0 22 88 0 0 chr5 131665756 131665813 -71419719 + AT_rich Low_complexity Low_complexity 1 57 0 445 319 62 75 chr5 131666422 131666602 -71418930 + L1 LINE L1 4233 4414 -1732 2167 115 0 10 chr5 131666602 131666914 -71418618 + AluSc SINE Alu 1 309 0 445 319 62 75 chr5 131666914 131667278 -71418254 + L1 LINE L1 4414 4770 -1376 25 51 0 0 chr5 131667354 131667393 -71418139 + AT_rich Low_complexity Low_complexity 1 39 0 220 113 40 48 chr5 131667419 131667543 -71417989 + (TA)n Simple_repeat Simple_repeat 1 123 0 602 217 28 17 chr5 131667550 131667730 -71417802 - MER33 DNA MER1_type -125 199 18 455 312 8 0 chr5 131668760 131668885 -71416647 - MIR SINE MIR -63 199 74 225 228 0 0 chr5 131670406 131670485 -71415047 + GA-rich Low_complexity Low_complexity 2 80 0 591 258 74 6 chr5 131670549 131670712 -71414820 - MIR SINE MIR -25 237 64 372 329 117 21 chr5 131670869 131671109 -71414423 + L2 LINE L2 2254 2516 -798 811 278 44 22 chr5 131671163 131671310 -71414222 + MIR SINE MIR 8 163 -99 3507 180 63 6 chr5 131671310 131672003 -71413529 - MER44D DNA MER2_type 0 605 1 811 278 44 22 chr5 131672003 131672082 -71413450 + MIR SINE MIR 163 239 -23 1985 133 36 36 chr5 131672478 131672840 -71412692 + THE1B LTR MaLR 1 362 -2 609 354 66 52 chr5 131673032 131673456 -71412076 + MER115 DNA AcHobo 1 430 -263 810 182 31 0 chr5 131673653 131673812 -71411720 + MER82 DNA MER2_type 1 164 -489 2726 143 109 8 chr5 131673829 131674057 -71411475 - L1MCa LINE L1 -4133 2293 2089 237 65 0 0 chr5 131674057 131674088 -71411444 + (TA)n Simple_repeat Simple_repeat 2 32 0 2726 143 109 8 chr5 131674088 131674888 -71410644 - L1MCa LINE L1 -4337 2089 1072 6104 154 13 13 chr5 131674889 131677100 -71408432 + L1MA3 LINE L1 4126 6305 0 2788 127 44 77 chr5 131677122 131677354 -71408178 - L1MCa LINE L1 -5338 1088 850 225 0 0 0 chr5 131677354 131677379 -71408153 + (TA)n Simple_repeat Simple_repeat 2 26 0 2788 127 44 77 chr5 131677379 131677720 -71407812 - L1MCa LINE L1 -5576 850 534 942 195 0 35 chr5 131677720 131677894 -71407638 - AluJo SINE Alu -139 173 6 1265 239 3 30 chr5 131677895 131678264 -71407268 + L1M4 LINE L1 4923 5281 -865 227 79 26 0 chr5 131678260 131678298 -71407234 + L1MC1 LINE L1 6266 6304 -29 * 12542 118 131 4 chr5 131678350 131680450 -71405082 + L1PA15 LINE L1 3 2369 -4494 12115 193 15 15 chr5 131680488 131682668 -71402864 + L1PA15 LINE L1 3322 5502 -1365 7709 25 0 0 chr5 131682668 131683709 -71401823 + L1PA4 LINE L1 5115 6155 0 12115 193 15 15 chr5 131683709 131684498 -71401034 + L1PA15 LINE L1 5502 6290 -577 2325 97 6 3 chr5 131684599 131684928 -71400604 + L1PB1 LINE L1 5815 6144 -7 1182 216 74 3 chr5 131684970 131685335 -71400197 + L1MCa LINE L1 2057 2447 -3979 * 2570 153 23 81 chr5 131685327 131685752 -71399780 + L1PA15 LINE L1 6389 6780 -101 2422 91 0 0 chr5 131685752 131686060 -71399472 + AluSp SINE Alu 4 311 -2 2570 153 23 81 chr5 131686060 131686156 -71399376 + L1PA15 LINE L1 6780 6880 -1 494 203 0 38 chr5 131686156 131686225 -71399307 + L1MCa LINE L1 2467 2530 -4077 2342 101 0 0 chr5 131686225 131686522 -71399010 + AluSg SINE Alu 1 297 -13 494 203 0 38 chr5 131686522 131686585 -71398947 + L1MCa LINE L1 2530 2594 -4013 677 331 134 8 chr5 131686586 131687010 -71398522 + L2 LINE L2 2741 3210 -103 212 200 44 11 chr5 131687016 131687106 -71398426 + (TA)n Simple_repeat Simple_repeat 2 94 0 285 257 14 0 chr5 131687115 131687185 -71398347 + L2 LINE L2 3201 3271 -1 236 292 31 0 chr5 131687193 131687258 -71398274 + L2 LINE L2 3227 3293 -20 325 196 0 0 chr5 131687488 131687544 -71397988 - MER63 DNA MER1_type -328 733 678 1531 204 107 85 chr5 131687772 131688266 -71397266 - MLT1D LTR MaLR 0 505 1 847 180 41 12 chr5 131688266 131688438 -71397094 + MER5B DNA MER1_type 2 178 0 3247 140 80 25 chr5 131689115 131689157 -71396375 - L1MA9 LINE L1 0 6312 6274 198 0 0 0 chr5 131689157 131689179 -71396353 + (TA)n Simple_repeat Simple_repeat 2 23 0 3247 140 80 25 chr5 131689179 131689844 -71395688 - L1MA9 LINE L1 -38 6274 5538 807 270 122 58 chr5 131690001 131690435 -71395097 + L2 LINE L2 2852 3313 0 348 24 0 0 chr5 131691181 131691222 -71394310 + (CA)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr5 131693437 131693457 -71392075 + (TTG)n Simple_repeat Simple_repeat 2 21 0 295 306 59 0 chr5 131694475 131694560 -71390972 - L2 LINE L2 -12 3260 3171 5627 156 60 26 chr5 131694701 131696083 -71389449 - L1MC1 LINE L1 -1 6612 5183 12540 182 26 9 chr5 131696088 131696800 -71388732 - L1MA7 LINE L1 -10 6281 5583 1884 122 165 27 chr5 131696800 131697176 -71388356 - MSTA LTR MaLR 0 428 1 8999 141 26 40 chr5 131697176 131698777 -71386755 - MSTA-int LTR MaLR 0 1580 3 1902 149 165 8 chr5 131698779 131699149 -71386383 - MSTA LTR MaLR 0 428 1 12540 182 26 9 chr5 131699149 131701965 -71383567 - L1MA7 LINE L1 -708 5583 2686 7817 221 70 53 chr5 131701965 131702420 -71383112 - L1MC1 LINE L1 -1227 5199 4753 246 81 0 0 chr5 131702420 131702457 -71383075 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 7817 221 70 53 chr5 131702457 131704699 -71380833 - L1MC1 LINE L1 -1673 4753 2550 5958 207 12 6 chr5 131704699 131705166 -71380366 + L1PA16 LINE L1 3942 4404 -1762 216 0 0 0 chr5 131705166 131705190 -71380342 + (CA)n Simple_repeat Simple_repeat 1 24 0 5958 207 12 6 chr5 131705190 131705492 -71380040 + L1PA16 LINE L1 4404 4702 -1464 2062 122 3 0 chr5 131705492 131705778 -71379754 + AluSx SINE Alu 21 307 -5 5958 207 12 6 chr5 131705778 131707224 -71378308 + L1PA16 LINE L1 4702 6155 -11 7817 221 70 53 chr5 131707224 131707701 -71377831 - L1MC1 LINE L1 -3876 2550 2082 2326 82 0 0 chr5 131707701 131708016 -71377516 + AluY SINE Alu 1 315 0 7817 221 70 53 chr5 131708016 131708569 -71376963 - L1MC1 LINE L1 -4344 2082 1397 332 91 0 0 chr5 131708569 131708624 -71376908 - L1MA1 LINE L1 0 6302 6248 7817 221 70 53 chr5 131708624 131708928 -71376604 - L1MC1 LINE L1 -5029 1397 1100 1539 202 86 29 chr5 131708931 131709559 -71375973 - L1M3 LINE L1 -470 5698 5042 13494 189 33 33 chr5 131709569 131713907 -71371625 - L1MA7 LINE L1 0 7710 3365 400 272 35 15 chr5 131713912 131714132 -71371400 + L1M2c LINE L1 1022 1182 -4146 * 1682 227 8 11 chr5 131714110 131714462 -71371070 - L1MA7 LINE L1 -6669 820 470 4774 173 36 13 chr5 131714481 131715429 -71370103 - L1M3 LINE L1 -1096 5050 4081 2925 230 53 94 chr5 131715435 131716612 -71368920 - L1MCb LINE L1 -4916 1129 1 308 186 0 81 chr5 131716612 131716698 -71368834 - L2 LINE L2 -549 2765 2687 4942 171 9 7 chr5 131717455 131718317 -71367215 - MER6 DNA MER2_type -1 864 1 333 309 48 8 chr5 131718514 131718640 -71366892 - MIR3 SINE MIR -1 207 77 3427 152 31 43 chr5 131720380 131721045 -71364487 - L1MB8 LINE L1 0 6178 5506 2037 130 3 0 chr5 131721045 131721367 -71364165 - AluSx SINE Alu 0 323 1 1691 119 0 4 chr5 131721376 131721612 -71363920 - AluY SINE Alu -22 289 55 3427 152 31 43 chr5 131721612 131721785 -71363747 - L1MB8 LINE L1 -680 5498 5149 254 26 53 0 chr5 131722859 131722897 -71362635 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 381 22 0 0 chr5 131723710 131723756 -71361776 + (CA)n Simple_repeat Simple_repeat 2 47 0 421 315 75 7 chr5 131724062 131724269 -71361263 + MIR SINE MIR 14 229 -33 198 298 0 0 chr5 131724568 131724615 -71360917 - L2 LINE L2 -9 3304 3258 199 297 74 78 chr5 131725697 131726129 -71359403 + L2 LINE L2 2671 3091 -181 236 309 73 57 chr5 131726224 131726347 -71359185 + L2 LINE L2 3148 3272 0 280 341 0 11 chr5 131726403 131726491 -71359041 - MIR3 SINE MIR -21 187 101 1654 170 0 37 chr5 131727031 131727331 -71358201 - AluJo SINE Alu -23 289 1 459 264 59 45 chr5 131778288 131778558 -71306974 + L1ME3 LINE L1 2974 4731 -1415 282 106 0 0 chr5 131778615 131778662 -71306870 + (CA)n Simple_repeat Simple_repeat 2 48 0 409 263 95 40 chr5 131778664 131779128 -71306404 + L1ME3 LINE L1 5111 5595 -647 270 81 0 0 chr5 131779212 131779249 -71306283 + (TG)n Simple_repeat Simple_repeat 2 38 0 378 291 26 5 chr5 131779311 131779500 -71306032 + L1ME3 LINE L1 5677 5869 -293 2260 103 7 0 chr5 131779562 131779854 -71305678 + AluSc SINE Alu 1 294 -15 1680 273 102 14 chr5 131780039 131780694 -71304838 + L1M3e LINE L1 7 719 -6311 1464 278 18 2 chr5 131780702 131781253 -71304279 + L1M3e LINE L1 1830 2389 -4648 640 218 19 114 chr5 131781288 131781402 -71304130 - L1ME1 LINE L1 -5 6161 6084 1911 175 0 0 chr5 131781402 131781699 -71303833 + AluJb SINE Alu 1 297 -15 640 218 19 114 chr5 131781699 131781846 -71303686 - L1ME1 LINE L1 -82 6084 5925 1005 206 36 176 chr5 131781860 131782144 -71303388 + L1M1 LINE L1 2498 2723 -4842 543 115 0 0 chr5 131782144 131782222 -71303310 + AluY SINE Alu 217 294 -17 1005 206 36 176 chr5 131782222 131782530 -71303002 + L1M1 LINE L1 2723 3073 -4492 1319 212 80 0 chr5 131782580 131782943 -71302589 + L1M1 LINE L1 4137 4528 -3037 13532 196 20 18 chr5 131782946 131783694 -71301838 + L1PB1 LINE L1 1341 2086 -4781 7478 35 1 1 chr5 131783694 131785214 -71300318 + L1PA5 LINE L1 4628 6145 -9 13532 196 20 18 chr5 131785214 131789981 -71295551 + L1PB1 LINE L1 2086 6859 -8 22 0 0 0 chr5 131789985 131790007 -71295525 + AT_rich Low_complexity Low_complexity 1 22 0 1977 134 10 17 chr5 131790013 131790311 -71295221 + AluSx SINE Alu 1 296 -16 2578 101 18 3 chr5 131790311 131790697 -71294835 + L1PA13 LINE L1 5772 6163 0 545 267 10 14 chr5 131792605 131792801 -71292731 + MIR SINE MIR 19 210 -52 207 147 0 44 chr5 131793199 131793267 -71292265 + (TAA)n Simple_repeat Simple_repeat 2 66 0 317 346 23 39 chr5 131794521 131794651 -71290881 + MIR3 SINE MIR 81 208 0 5830 114 7 14 chr5 131795603 131796794 -71288738 + L1P3 LINE L1 886 2069 -4392 699 113 0 0 chr5 131796801 131796907 -71288625 + L1P LINE L1 4131 4236 -1910 409 191 0 0 chr5 131797264 131797348 -71288184 + MLT1D LTR MaLR 421 504 -1 2635 158 73 13 chr5 131797822 131798368 -71287164 + L1MB8 LINE L1 5402 5980 -198 1729 118 71 47 chr5 131798369 131798409 -71287123 - THE1C LTR MaLR -2 373 335 2174 121 47 16 chr5 131798409 131798773 -71286759 + THE1C LTR MaLR 1 375 0 1729 118 71 47 chr5 131798773 131799096 -71286436 - THE1C LTR MaLR -40 335 1 687 231 15 15 chr5 131799096 131799291 -71286241 + L1MB8 LINE L1 5975 6169 -9 1332 228 14 48 chr5 131799641 131799760 -71285772 + MER69 DNA AcHobo 1 123 -2403 1893 143 49 35 chr5 131799760 131800130 -71285402 + THE1C LTR MaLR 1 375 0 1332 228 14 48 chr5 131800130 131800361 -71285171 + MER69 DNA AcHobo 123 339 -2187 378 211 0 0 chr5 131800360 131800436 -71285096 - MER69 DNA AcHobo -2012 514 439 * 288 211 84 0 chr5 131800480 131800575 -71284957 + MER69 DNA AcHobo 2161 2263 -263 455 299 101 45 chr5 131800576 131800974 -71284558 + L1ME4a LINE L1 4970 5389 -757 433 299 49 49 chr5 131801138 131801214 -71284318 + L1ME4a LINE L1 5709 5784 -337 2134 139 73 14 chr5 131801214 131801558 -71283974 + THE1B LTR MaLR 1 364 0 11412 99 17 0 chr5 131801558 131803112 -71282420 + THE1B-int LTR MaLR 1 1580 0 2121 130 72 17 chr5 131803112 131803457 -71282075 + THE1B LTR MaLR 1 364 0 433 299 49 49 chr5 131803457 131803582 -71281950 + L1ME4a LINE L1 5781 5912 -209 793 280 89 8 chr5 131803621 131803857 -71281675 - MIR SINE MIR 0 262 8 368 256 33 0 chr5 131803909 131804030 -71281502 + L1ME4a LINE L1 5973 6097 -24 364 155 0 0 chr5 131804220 131804319 -71281213 + AluS SINE Alu 224 322 0 2106 104 0 24 chr5 131806245 131806675 -71278857 - AluSx SINE Alu 0 423 1 842 224 50 0 chr5 131807263 131807442 -71278090 + MER5A DNA MER1_type 1 188 -1 2035 136 4 0 chr5 131808080 131808380 -71277152 - AluSx SINE Alu 0 301 1 944 307 177 20 chr5 131808748 131809358 -71276174 + L2 LINE L2 156 861 -2453 29 60 0 0 chr5 131809642 131809692 -71275840 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr5 131809764 131809793 -71275739 + AT_rich Low_complexity Low_complexity 1 29 0 1830 164 7 0 chr5 131810099 131810413 -71275119 - AluSx SINE Alu 0 316 1 5286 149 15 6 chr5 131810422 131811602 -71273930 - L1PA16 LINE L1 -3 6163 4973 2003 219 40 12 chr5 131811620 131812213 -71273319 + L1 LINE L1 2224 2833 -3313 265 235 10 10 chr5 131812523 131812625 -71272907 + GA-rich Low_complexity Low_complexity 3 104 0 203 79 26 0 chr5 131813002 131813040 -71272492 + (TATAA)n Simple_repeat Simple_repeat 5 43 0 798 146 29 6 chr5 131813207 131813378 -71272154 - L1MB8 LINE L1 0 6178 6004 327 203 0 0 chr5 131813452 131813521 -71272011 + (TA)n Simple_repeat Simple_repeat 1 69 0 249 218 23 23 chr5 131813534 131813621 -71271911 + (TA)n Simple_repeat Simple_repeat 2 88 0 315 49 0 0 chr5 131813626 131813667 -71271865 + (CA)n Simple_repeat Simple_repeat 2 42 0 1909 178 3 0 chr5 131813703 131814001 -71271531 + AluJo SINE Alu 1 299 -13 725 258 94 11 chr5 131814011 131814278 -71271254 + MER113 DNA MER1_type? 233 521 0 339 94 47 106 chr5 131815666 131815703 -71269829 - MER46A DNA MER2_type -60 176 145 831 157 124 11 chr5 131815703 131815888 -71269644 + Tigger4(Zombi) DNA MER2_type 1 206 -2525 888 102 8 2 chr5 131815906 131816162 -71269370 + AluSx SINE Alu 1 306 -3 2752 107 25 41 chr5 131816163 131816647 -71268885 + Tigger4(Zombi) DNA MER2_type 2256 2731 0 245 244 12 37 chr5 131819534 131819616 -71265916 + CT-rich Low_complexity Low_complexity 4 83 0 303 71 0 0 chr5 131821350 131821392 -71264140 + (TG)n Simple_repeat Simple_repeat 1 42 0 2315 105 0 0 chr5 131821911 131822217 -71263315 + AluSq SINE Alu 1 306 -7 1800 168 0 11 chr5 131822961 131823291 -71262241 + AluJb SINE Alu 1 327 0 188 262 0 0 chr5 131823944 131823986 -71261546 + L2 LINE L2 3156 3197 -75 2159 139 119 13 chr5 131824343 131824730 -71260802 + MSTA LTR MaLR 1 428 0 292 163 163 35 chr5 131825094 131825180 -71260352 + MLT1L LTR MaLR 1 97 -518 571 264 92 0 chr5 131825379 131825629 -71259903 + MLT1L LTR MaLR 337 609 -6 374 392 57 8 chr5 131825677 131826044 -71259488 + L2 LINE L2 947 1331 -1983 418 342 45 14 chr5 131826158 131826380 -71259152 + MLT1I LTR MaLR 5 233 -176 339 245 29 0 chr5 131826415 131826517 -71259015 + MLT1I LTR MaLR 305 409 0 308 197 0 13 chr5 131826629 131826705 -71258827 + (TATG)n Simple_repeat Simple_repeat 2 76 0 426 48 16 32 chr5 131826809 131826871 -71258661 + U7 snRNA snRNA 2 62 -1 275 324 110 30 chr5 131827819 131828118 -71257414 + L2 LINE L2 1933 2255 -1059 2041 157 31 30 chr5 131828144 131828699 -71256833 - MLT2A2 LTR ERVL 0 554 1 22 0 0 0 chr5 131828891 131828913 -71256619 + AT_rich Low_complexity Low_complexity 1 22 0 373 266 71 49 chr5 131829144 131829328 -71256204 - MIR3 SINE MIR -17 191 4 210 220 0 0 chr5 131829853 131829912 -71255620 + (TATG)n Simple_repeat Simple_repeat 2 60 0 181 169 15 15 chr5 131830202 131830267 -71255265 + (TA)n Simple_repeat Simple_repeat 1 65 0 3922 231 33 76 chr5 131830576 131831702 -71253830 + L1PA10 LINE L1 229 1284 -5177 3450 15 0 0 chr5 131831702 131832098 -71253434 + L1PA2 LINE L1 5757 6152 -3 3922 231 33 76 chr5 131832098 131832500 -71253032 + L1PA10 LINE L1 1284 1702 -4759 1647 152 0 36 chr5 131832500 131832701 -71252831 + L1PA10 LINE L1 2988 3175 -3286 2018 145 0 0 chr5 131832701 131833009 -71252523 + AluSx SINE Alu 1 308 0 1647 152 0 36 chr5 131833009 131833135 -71252397 + L1PA10 LINE L1 3175 3304 -3157 12886 137 10 0 chr5 131833140 131836175 -71249357 + L1PA10 LINE L1 3427 6467 -16 297 0 0 0 chr5 131836188 131836221 -71249311 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 424 226 34 68 chr5 131837281 131837458 -71248074 + L2 LINE L2 3135 3305 -8 510 293 192 14 chr5 131838319 131838678 -71246854 - MLT1J LTR MaLR -4 507 85 199 189 0 0 chr5 131839366 131839403 -71246129 + MIR SINE MIR 114 150 -112 474 351 45 8 chr5 131840068 131840310 -71245222 - L2 LINE L2 -194 3078 2828 409 282 158 45 chr5 131840425 131840668 -71244864 - L2 LINE L2 -1377 1937 1723 2559 68 0 0 chr5 131840668 131840977 -71244555 + AluY SINE Alu 1 309 -2 409 282 158 45 chr5 131840977 131841282 -71244250 - L2 LINE L2 -1591 1723 1327 1845 181 3 0 chr5 131841319 131841617 -71243915 - AluJb SINE Alu -13 299 1 321 299 9 19 chr5 131842768 131842875 -71242657 + MIR SINE MIR 154 259 -3 263 327 25 31 chr5 131843434 131843563 -71241969 + MIR SINE MIR 24 150 -66 1827 158 153 15 chr5 131844445 131844850 -71240682 + LOR1b LTR ERV1 1 461 0 1030 212 5 15 chr5 131844850 131845053 -71240479 + LOR1b-int LTR ERV1 1 201 -7919 837 93 0 0 chr5 131845053 131845161 -71240371 + AluY SINE Alu 172 279 -32 1128 50 19 6 chr5 131845162 131845322 -71240210 + (GAAA)n Simple_repeat Simple_repeat 2 163 0 776 147 115 6 chr5 131845322 131845479 -71240053 + LOR1b-int LTR ERV1 195 368 -7752 7489 119 70 72 chr5 131845508 131845826 -71239706 + LOR1-int LTR ERV1 198 515 -7605 240 265 0 0 chr5 131845826 131845875 -71239657 + 5S rRNA rRNA 2 50 -71 7489 119 70 72 chr5 131845875 131846268 -71239264 + LOR1-int LTR ERV1 515 907 -7213 1887 160 3 0 chr5 131846268 131846556 -71238976 + AluJb SINE Alu 1 289 -23 7489 119 70 72 chr5 131846556 131847467 -71238065 + LOR1-int LTR ERV1 907 1866 -6254 3330 157 66 92 chr5 131847478 131848502 -71237030 + LOR1b-int LTR ERV1 2350 4370 -2228 12058 105 61 58 chr5 131848508 131850614 -71234918 + LOR1b-int LTR ERV1 6009 8120 0 1931 199 56 16 chr5 131850614 131851057 -71234475 + LOR1b LTR ERV1 1 461 0 263 261 200 9 chr5 131851064 131851179 -71234353 - MIR SINE MIR -118 144 8 348 327 0 0 chr5 131851542 131851646 -71233886 + MIR SINE MIR 153 256 -6 2387 71 0 0 chr5 131851707 131852001 -71233531 + AluY SINE Alu 1 294 -17 416 231 11 0 chr5 131852396 131852487 -71233045 + MLT1J1 LTR MaLR 65 156 -290 361 295 9 36 chr5 131852532 131852644 -71232888 + MLT1J2 LTR MaLR 241 349 -101 213 196 36 0 chr5 131853685 131853741 -71231791 + T-rich Low_complexity Low_complexity 1 58 0 778 170 0 0 chr5 131854139 131854280 -71231252 + L1MB3 LINE L1 6033 6173 -10 728 226 37 6 chr5 131854654 131854818 -71230714 + MER45A DNA AcHobo 1 169 -9 435 52 0 0 chr5 131855025 131855083 -71230449 + (TG)n Simple_repeat Simple_repeat 1 58 0 27 0 0 0 chr5 131856488 131856515 -71229017 + AT_rich Low_complexity Low_complexity 1 27 0 890 184 153 5 chr5 131856697 131856887 -71228645 - MER20 DNA MER1_type -1 218 1 200 214 36 36 chr5 131858661 131858717 -71226815 + MIR SINE MIR 95 150 -112 397 262 0 39 chr5 131858796 131858899 -71226633 + MER5A DNA MER1_type 11 109 -80 245 298 191 14 chr5 131858820 131858961 -71226571 - MER5A DNA MER1_type -23 166 1 * 360 198 58 0 chr5 131858975 131859061 -71226471 + MER5C DNA MER1_type 33 123 -201 877 269 52 0 chr5 131859278 131859490 -71226042 - MER58A DNA MER1_type 0 224 2 1221 207 9 0 chr5 131859827 131860049 -71225483 + MER58A DNA MER1_type 1 224 0 207 266 298 8 chr5 131862136 131862260 -71223272 - MIR SINE MIR -95 167 8 1355 206 65 13 chr5 131862543 131862853 -71222679 - MLT1A1 LTR MaLR -35 330 5 388 287 0 20 chr5 131863574 131863675 -71221857 + L3 LINE CR1 430 528 -1049 359 289 120 7 chr5 131863687 131863829 -71221703 + L3 LINE CR1 1071 1228 -349 2216 75 4 4 chr5 131865724 131866028 -71219504 + AluY SINE Alu 1 304 0 1708 174 0 34 chr5 131866190 131866513 -71219019 + AluJo SINE Alu 1 313 0 1711 201 6 6 chr5 131866740 131867079 -71218453 + MLT1A1 LTR MaLR 1 339 -26 350 309 174 24 chr5 131867518 131867942 -71217590 + MLT1K LTR MaLR 84 571 -17 1778 189 68 27 chr5 131869365 131869804 -71215728 + LTR2B LTR ERV1 34 490 0 252 314 69 21 chr5 131870098 131870286 -71215246 - L2 LINE L2 -5 3308 3112 8125 172 15 9 chr5 131870874 131873591 -71211941 + L1MA4 LINE L1 3559 6289 -11 363 44 0 0 chr5 131873616 131873661 -71211871 + (TG)n Simple_repeat Simple_repeat 2 46 0 2210 100 7 13 chr5 131873813 131874112 -71211420 - AluSx SINE Alu -14 298 2 205 384 10 0 chr5 131874320 131874419 -71211113 + L2 LINE L2 3180 3279 -34 524 246 107 32 chr5 131874498 131874836 -71210696 - L1ME4a LINE L1 -242 5879 5517 847 168 0 0 chr5 131875365 131875496 -71210036 - FLAM_C SINE Alu -2 131 1 289 245 28 57 chr5 131875668 131875774 -71209758 + MLT1A1 LTR MaLR 300 402 -153 25 31 0 0 chr5 131876898 131876930 -71208602 + AT_rich Low_complexity Low_complexity 1 32 0 370 319 60 73 chr5 131877716 131877964 -71207568 - L3 LINE CR1 -5 1572 1328 287 238 91 0 chr5 131878150 131878293 -71207239 - Charlie7 DNA MER1_type -1 2611 2456 11377 235 42 25 chr5 131878518 131880401 -71205131 + L1M3e LINE L1 1434 3283 -3823 1609 79 5 0 chr5 131880401 131880616 -71204916 + L1PA7 LINE L1 5939 6154 0 11377 235 42 25 chr5 131880616 131881838 -71203694 + L1M3e LINE L1 3283 4483 -2623 1887 157 10 19 chr5 131881838 131882150 -71203382 + AluJb SINE Alu 2 310 -2 11377 235 42 25 chr5 131882150 131883941 -71201591 + L1M3e LINE L1 4483 6114 -992 6125 183 14 33 chr5 131883934 131885125 -71200407 + L1MA4 LINE L1 3738 4950 -1350 * 772 259 0 0 chr5 131885125 131885295 -71200237 + FRAM SINE Alu 1 169 -7 6125 183 14 33 chr5 131885295 131886618 -71198914 + L1MA4 LINE L1 4950 6260 -40 282 277 32 84 chr5 131887095 131887250 -71198282 - MER5A DNA MER1_type 0 189 43 * 322 260 16 79 chr5 131887126 131887253 -71198279 + MER5A DNA MER1_type 43 161 -28 1484 220 21 12 chr5 131887319 131887651 -71197881 - MER58B DNA MER1_type 0 341 7 1630 190 10 10 chr5 131889115 131889405 -71196127 + AluJo SINE Alu 7 296 -16 544 272 31 36 chr5 131890009 131890204 -71195328 - Charlie8 DNA MER1_type -2214 203 10 568 189 90 0 chr5 131891498 131891620 -71193912 - AluSq/x SINE Alu -178 135 3 321 298 10 0 chr5 131892236 131892340 -71193192 + MARNA DNA Mariner 458 562 -24 210 171 0 0 chr5 131893841 131893882 -71191650 + (TG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr5 131894358 131894388 -71191144 + AT_rich Low_complexity Low_complexity 1 30 0 286 344 65 50 chr5 131895529 131895702 -71189830 - L2 LINE L2 0 3313 3144 2794 88 3 8 chr5 131895702 131896079 -71189453 - THE1C LTR MaLR 0 375 1 286 344 65 50 chr5 131896079 131896459 -71189073 - L2 LINE L2 -169 3144 2742 379 377 52 21 chr5 131896945 131897234 -71188298 - L2 LINE L2 -1966 1348 1051 * 449 230 20 0 chr5 131897226 131897326 -71188206 + L2 LINE L2 3212 3313 0 327 369 37 25 chr5 131897992 131898233 -71187299 + MIR SINE MIR 3 246 -16 279 0 0 0 chr5 131898299 131898330 -71187202 + (TG)n Simple_repeat Simple_repeat 2 32 0 929 243 189 0 chr5 131898392 131898730 -71186802 - L1M4 LINE L1 -881 5265 4864 2382 78 3 0 chr5 131898758 131899052 -71186480 - AluY SINE Alu -16 295 1 509 232 0 10 chr5 131899056 131899174 -71186358 - L1MC5 LINE L1 -1118 6877 6717 630 278 88 71 chr5 131899699 131900231 -71185301 + MLT1H LTR MaLR 5 545 -4 4900 252 30 10 chr5 131900233 131901383 -71184149 + ERVL LTR ERVL 4006 5178 -586 295 322 110 43 chr5 131901383 131901728 -71183804 + L1M3b LINE L1 1 368 -5913 1691 149 37 18 chr5 131901739 131902271 -71183261 - L1M1 LINE L1 -741 5559 5017 537 206 0 0 chr5 131902283 131902380 -71183152 + FLAM_C SINE Alu 12 108 -35 1668 219 94 10 chr5 131902386 131902779 -71182753 + MLT2E LTR ERVL 195 620 -8 1257 165 28 14 chr5 131902801 131903034 -71182498 - MSTD LTR MaLR 0 396 116 495 121 0 0 chr5 131903082 131903148 -71182384 - Tigger1 DNA MER2_type 0 2418 2353 389 290 214 24 chr5 131903177 131903429 -71182103 + L2 LINE L2 3014 3313 0 26 0 0 0 chr5 131903666 131903692 -71181840 + AT_rich Low_complexity Low_complexity 1 26 0 2103 112 4 0 chr5 131904810 131905111 -71180421 - AluSg1 SINE Alu 0 302 1 1627 164 133 6 chr5 131905185 131905509 -71180023 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 131905561 131905583 -71179949 + AT_rich Low_complexity Low_complexity 1 22 0 1391 162 0 68 chr5 131906231 131906497 -71179035 + AluJo SINE Alu 40 287 -25 2146 71 0 0 chr5 131907482 131907760 -71177772 + AluY SINE Alu 29 306 0 1668 160 3 28 chr5 131907924 131908236 -71177296 - AluJo SINE Alu 0 305 1 22 0 0 0 chr5 131908286 131908308 -71177224 + AT_rich Low_complexity Low_complexity 1 22 0 279 132 0 0 chr5 131910649 131910687 -71174845 + Alu SINE Alu 16 53 -249 25 31 0 0 chr5 131910720 131910752 -71174780 + AT_rich Low_complexity Low_complexity 1 32 0 291 285 55 35 chr5 131911028 131911228 -71174304 + MLT1J LTR MaLR 303 506 -5 1628 147 0 52 chr5 131911239 131911511 -71174021 + AluJb SINE Alu 16 273 -39 2388 73 3 7 chr5 131911527 131911829 -71173703 - AluSg SINE Alu -9 301 1 425 157 35 17 chr5 131911843 131911958 -71173574 + GA-rich Low_complexity Low_complexity 3 119 0 747 295 47 32 chr5 131912376 131912715 -71172817 + MLT1I LTR MaLR 3 346 -63 1687 172 9 50 chr5 131913429 131913749 -71171783 + AluJo SINE Alu 4 310 -2 220 214 0 0 chr5 131913752 131913794 -71171738 + A-rich Low_complexity Low_complexity 4 45 0 24 53 0 0 chr5 131914784 131914822 -71170710 + AT_rich Low_complexity Low_complexity 1 38 0 501 47 0 0 chr5 131915483 131915547 -71169985 + (CA)n Simple_repeat Simple_repeat 2 65 0 24 32 0 0 chr5 131916814 131916845 -71168687 + AT_rich Low_complexity Low_complexity 1 31 0 622 199 163 0 chr5 131916985 131917181 -71168351 + L1ME LINE L1 5258 5485 -677 1516 86 34 0 chr5 131917199 131917432 -71168100 + L1P LINE L1 4743 4983 -1163 828 65 73 8 chr5 131917538 131917702 -71167830 + L1PA7 LINE L1 6020 6154 0 2249 167 4 21 chr5 131917702 131917814 -71167718 + L1PA16 LINE L1 4885 4997 -1168 1965 120 9 49 chr5 131917814 131918139 -71167393 + AluSx SINE Alu 1 312 0 2249 167 4 21 chr5 131918139 131918596 -71166936 + L1PA16 LINE L1 4997 5439 -726 1853 134 99 0 chr5 131918597 131918881 -71166651 + AluSx SINE Alu 1 312 0 5437 180 47 30 chr5 131918883 131920041 -71165491 - MER11A LTR ERVK 0 1266 1 4370 133 26 11 chr5 131920042 131920761 -71164771 + L1PA16 LINE L1 5428 6157 -9 3906 127 64 2 chr5 131920771 131921411 -71164121 + L1PA16 LINE L1 5479 6158 -8 1349 177 102 4 chr5 131922450 131922716 -71162816 + AluJb SINE Alu 3 294 -18 499 121 0 128 chr5 131923281 131923562 -71161970 - AluY SINE Alu -24 287 43 216 201 37 67 chr5 131931073 131931237 -71154295 + (CACAC)n Simple_repeat Simple_repeat 4 162 0 215 133 27 80 chr5 131931868 131931943 -71153589 + (CACAA)n Simple_repeat Simple_repeat 2 72 0 252 294 12 35 chr5 131935548 131935718 -71149814 + (TATATG)n Simple_repeat Simple_repeat 2 167 0 887 330 90 43 chr5 131935881 131936749 -71148783 - L1M4 LINE L1 -2170 3976 3068 690 205 54 63 chr5 131936766 131937128 -71148404 + MLT1A1 LTR MaLR 3 330 -66 1162 166 0 0 chr5 131937191 131937366 -71148166 + FRAM SINE Alu 1 175 -1 460 258 73 0 chr5 131937882 131938006 -71147526 + MIR SINE MIR 2 134 -128 2818 227 26 17 chr5 131938155 131938995 -71146537 + L1MB3 LINE L1 4457 5304 -842 1862 143 11 11 chr5 131938995 131939281 -71146251 + AluJb SINE Alu 19 304 -8 384 173 27 100 chr5 131939294 131939444 -71146088 + L1MB3 LINE L1 5819 5957 -226 209 262 0 37 chr5 131939627 131939791 -71145741 + T-rich Low_complexity Low_complexity 3 160 0 264 161 11 21 chr5 131939907 131940000 -71145532 + T-rich Low_complexity Low_complexity 5 96 0 26 30 0 0 chr5 131940132 131940165 -71145367 + AT_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr5 131940614 131940660 -71144872 + AT_rich Low_complexity Low_complexity 1 46 0 181 189 178 33 chr5 131940701 131940791 -71144741 + L2 LINE L2 2301 2403 -911 489 296 90 30 chr5 131940939 131941405 -71144127 - L1ME3 LINE L1 -205 5957 5464 2438 83 0 16 chr5 131941487 131941799 -71143733 - AluSq SINE Alu -5 308 2 200 194 0 0 chr5 131941899 131941935 -71143597 + MIR SINE MIR 58 93 -115 507 219 144 17 chr5 131942122 131942427 -71143105 - L1ME3 LINE L1 -743 5403 5066 530 234 38 6 chr5 131942429 131942587 -71142945 + L1MEc LINE L1 485 647 -5749 244 244 130 17 chr5 131942746 131942861 -71142671 + MLT1A1 LTR MaLR 409 536 -13 493 262 106 42 chr5 131943251 131943629 -71141903 - L1MC5 LINE L1 -54 7907 7506 230 336 9 17 chr5 131943646 131943762 -71141770 - L1MC4 LINE L1 -568 7474 7360 342 287 17 28 chr5 131943820 131944001 -71141531 - L1MC5 LINE L1 -735 7226 7048 263 229 0 42 chr5 131944206 131944302 -71141230 - L1MC5 LINE L1 -1049 6912 6821 215 214 55 35 chr5 131944541 131944558 -71140974 + (TTATA)n Simple_repeat Simple_repeat 5 20 -132 1867 177 0 7 chr5 131944558 131944858 -71140674 + AluJb SINE Alu 1 298 -14 215 214 55 35 chr5 131944858 131944985 -71140547 + (TTATA)n Simple_repeat Simple_repeat 20 152 0 482 247 54 25 chr5 131944997 131945236 -71140296 - L1MC5 LINE L1 -1877 5931 5686 1065 246 36 18 chr5 131945259 131945593 -71139939 - L1MC5 LINE L1 -2178 5630 5291 717 266 143 39 chr5 131946347 131946685 -71138847 - L2 LINE L2 -5 3308 2918 1699 151 57 42 chr5 131946685 131947017 -71138515 + MER1B DNA MER1_type 1 337 0 717 266 143 39 chr5 131947017 131947091 -71138441 - L2 LINE L2 -395 2918 2853 725 292 68 30 chr5 131947376 131947712 -71137820 + MLT1L LTR MaLR 7 355 -260 239 192 0 19 chr5 131947736 131947788 -71137744 + MLT1J LTR MaLR 380 430 -81 3799 45 4 2 chr5 131948796 131949263 -71136269 + L1PA3 LINE L1 5688 6155 0 351 131 0 0 chr5 131949283 131949346 -71136186 - MER67A LTR ERV1 -270 273 223 232 45 0 45 chr5 131949347 131949391 -71136141 + (TTTTA)n Simple_repeat Simple_repeat 4 45 0 192 40 0 0 chr5 131949739 131949764 -71135768 + (CA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr5 131950161 131950182 -71135350 + AT_rich Low_complexity Low_complexity 1 21 0 330 80 0 0 chr5 131950706 131950756 -71134776 + (TG)n Simple_repeat Simple_repeat 2 51 0 2357 107 0 0 chr5 131951357 131951666 -71133866 + AluSg SINE Alu 1 309 -1 460 258 73 0 chr5 131952182 131952306 -71133226 + MIR SINE MIR 2 134 -128 2848 228 26 16 chr5 131952455 131953294 -71132238 + L1MB2 LINE L1 4457 5304 -842 1890 146 7 11 chr5 131953294 131953581 -71131951 + AluJb SINE Alu 19 304 -8 1293 228 36 6 chr5 131953594 131953840 -71131692 + L1MB2 LINE L1 5819 6079 -92 225 0 0 0 chr5 131953840 131953865 -71131667 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1293 228 36 6 chr5 131953865 131953952 -71131580 + L1MB2 LINE L1 6079 6162 -9 1982 161 53 31 chr5 131954520 131954935 -71130597 + MSTB LTR MaLR 3 426 0 344 271 49 16 chr5 131954965 131955087 -71130445 + L1MC/D LINE L1 5679 5804 -2004 12718 123 35 57 chr5 131955135 131957558 -71127974 - Tigger1 DNA MER2_type -3 2415 48 3313 218 61 0 chr5 131957559 131958243 -71127289 + L1PA13 LINE L1 2 727 -6060 18006 176 23 19 chr5 131958379 131961912 -71123620 + L1PA13 LINE L1 927 4444 -2370 2454 93 0 0 chr5 131961912 131962223 -71123309 + AluY SINE Alu 1 311 0 18006 176 23 19 chr5 131962223 131964046 -71121486 + L1PA13 LINE L1 4444 6477 -337 2018 133 3 13 chr5 131964046 131964355 -71121177 + AluSx SINE Alu 1 306 -6 18006 176 23 19 chr5 131964355 131964692 -71120840 + L1PA13 LINE L1 6477 6811 -3 257 237 0 26 chr5 131964929 131965005 -71120527 + HsTC2 DNA Tc2 14 87 -1811 26 30 0 0 chr5 131965400 131965433 -71120099 + AT_rich Low_complexity Low_complexity 1 33 0 1488 209 50 16 chr5 131966263 131966626 -71118906 - THE1C LTR MaLR 0 375 1 9398 123 35 26 chr5 131966626 131968191 -71117341 - THE1C-int LTR MaLR 0 1580 3 1647 147 99 40 chr5 131968193 131968547 -71116985 - THE1C LTR MaLR 0 375 1 2279 81 34 0 chr5 131969443 131969738 -71115794 + AluY SINE Alu 1 305 -6 1363 177 0 135 chr5 131969745 131969890 -71115642 + AluJo SINE Alu 1 164 -138 2156 110 3 16 chr5 131969890 131970200 -71115332 + AluY SINE Alu 1 306 -5 2254 116 3 3 chr5 131970202 131970513 -71115019 + AluSq SINE Alu 1 311 -2 1363 177 0 135 chr5 131970513 131970698 -71114834 + AluJo SINE Alu 165 289 -13 253 296 153 10 chr5 131970904 131971002 -71114530 - L2 LINE L2 -16 3297 3186 456 68 0 0 chr5 131971462 131971535 -71113997 + L1MD2 LINE L1 6286 6358 -1 1539 172 0 78 chr5 131972342 131972662 -71112870 - AluJo SINE Alu -17 295 1 2861 232 47 33 chr5 131972810 131973910 -71111622 - L1ME1 LINE L1 -5 6161 5051 239 321 9 0 chr5 131974107 131974213 -71111319 + L1ME1 LINE L1 5780 5886 -1922 28 48 0 0 chr5 131974258 131974300 -71111232 + AT_rich Low_complexity Low_complexity 1 42 0 639 302 116 0 chr5 131974751 131974983 -71110549 - MIR SINE MIR -3 259 1 2502 78 0 3 chr5 131975282 131975590 -71109942 - AluSc SINE Alu -2 307 1 22 0 0 0 chr5 131975643 131975665 -71109867 + AT_rich Low_complexity Low_complexity 1 22 0 1803 183 40 26 chr5 131976671 131977175 -71108357 - Charlie5 DNA MER1_type -4 2608 2098 286 219 67 9 chr5 131977223 131977328 -71108204 + L1ME1 LINE L1 6048 6158 -8 * 1235 231 101 87 chr5 131977309 131977826 -71107706 + L1MC4a LINE L1 5416 5947 -1861 1906 129 52 0 chr5 131977826 131978113 -71107419 + AluSx SINE Alu 1 302 -10 1235 231 101 87 chr5 131978113 131978296 -71107236 + L1MC4a LINE L1 5947 6126 -1682 1288 274 37 22 chr5 131978301 131978706 -71106826 + MLT1E2 LTR MaLR 86 496 -130 359 61 21 0 chr5 131978730 131978789 -71106743 + Alu SINE Alu 245 297 -4 201 328 146 18 chr5 131978805 131978976 -71106556 + L2 LINE L2 2527 2719 -595 889 194 29 65 chr5 131979014 131979323 -71106209 + L1ME1 LINE L1 4581 4878 -1268 * 6295 167 25 17 chr5 131979303 131980587 -71104945 + L1 LINE L1 3683 4976 -1170 234 214 0 0 chr5 131981490 131981532 -71104000 - MLT1G LTR MaLR -344 246 205 * 1052 245 94 35 chr5 131981531 131981793 -71103739 + MLT1H1 LTR MaLR 253 535 -20 2456 198 32 44 chr5 131981793 131982358 -71103174 - MER68 LTR ERV1 -4 558 1 1052 245 94 35 chr5 131982358 131982381 -71103151 + MLT1H1 LTR MaLR 535 555 0 22 25 0 25 chr5 131982580 131982607 -71102925 + AT_rich Low_complexity Low_complexity 1 28 -11 1808 166 17 3 chr5 131982607 131982897 -71102635 - AluJb SINE Alu -18 294 1 22 25 0 25 chr5 131982897 131982909 -71102623 + AT_rich Low_complexity Low_complexity 28 39 0 2263 100 3 3 chr5 131983108 131983409 -71102123 + AluSq SINE Alu 1 301 -12 2471 234 23 9 chr5 131983648 131984249 -71101283 - MER82 DNA MER2_type -12 641 1 1343 214 80 62 chr5 131984261 131984525 -71101007 - L1ME3A LINE L1 -9 6161 5884 2160 121 0 16 chr5 131984525 131984839 -71100693 - AluSx SINE Alu -3 309 1 1343 214 80 62 chr5 131984839 131985022 -71100510 - L1ME3A LINE L1 -286 5884 5706 2382 76 3 0 chr5 131985377 131985679 -71099853 + AluY SINE Alu 1 303 -8 26 0 0 0 chr5 131986405 131986431 -71099101 + AT_rich Low_complexity Low_complexity 1 26 0 689 184 0 24 chr5 131986513 131986638 -71098894 - FLAM_A SINE Alu -11 122 1 208 226 0 19 chr5 131986996 131987049 -71098483 + L2 LINE L2 3261 3312 -1 222 212 0 45 chr5 131989808 131989874 -71095658 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2805 225 64 25 chr5 131990586 131991584 -71093948 + L1ME1 LINE L1 5129 6151 -15 1478 199 32 76 chr5 131992026 131992176 -71093356 - MLT2D LTR ERVL 0 414 259 2204 105 10 0 chr5 131992176 131992471 -71093061 + AluSx SINE Alu 1 298 -14 1478 199 32 76 chr5 131992471 131992752 -71092780 - MLT2D LTR ERVL -155 259 2 1108 191 27 43 chr5 131992821 131993078 -71092454 + L1MDa LINE L1 1 253 -6287 232 355 43 4 chr5 131993130 131993260 -71092272 - MIR SINE MIR -57 151 19 241 274 95 0 chr5 131993556 131993651 -71091881 + L1M3e LINE L1 2 105 -6925 4129 177 12 11 chr5 131994680 131995432 -71090100 - MLT1A1-int LTR MaLR -981 754 2 1701 185 36 17 chr5 131995435 131995791 -71089741 - MLT1A1 LTR MaLR -2 363 1 2664 136 39 73 chr5 131995791 131996486 -71089046 + L1MA9 LINE L1 5235 5866 -443 313 306 91 0 chr5 131996487 131996608 -71088924 - MLT1K LTR MaLR -137 451 320 254 338 225 0 chr5 131996613 131996755 -71088777 + MER91A DNA MER1_type 1 174 -22 302 300 33 42 chr5 131996972 131997092 -71088440 - MLT1K LTR MaLR -467 121 3 565 308 61 53 chr5 131997092 131997511 -71088021 + L2 LINE L2 2748 3170 -102 946 70 78 0 chr5 131997772 131997901 -71087631 - MER85 DNA T2_type 0 139 1 523 264 85 0 chr5 131997988 131998117 -71087415 + MLT2D LTR ERVL 202 341 -73 306 67 0 0 chr5 131998117 131998162 -71087370 + (TA)n Simple_repeat Simple_repeat 1 45 0 180 0 0 0 chr5 131998161 131998181 -71087351 + (CA)n Simple_repeat Simple_repeat 2 21 0 * 478 364 60 16 chr5 131998220 131998536 -71086996 + HAL1b LINE L1 456 785 -563 29 28 0 0 chr5 131998699 131998735 -71086797 + AT_rich Low_complexity Low_complexity 1 36 0 944 218 201 49 chr5 131998851 131999195 -71086337 + MSTD LTR MaLR 1 396 0 241 93 23 0 chr5 131999285 131999328 -71086204 - MADE1 DNA Mariner -33 47 4 200 277 0 0 chr5 131999331 131999378 -71086154 - L2 LINE L2 -96 3217 3171 241 273 0 0 chr5 131999414 131999480 -71086052 + FAM SINE Alu 112 177 -2 318 341 22 22 chr5 131999485 131999664 -71085868 + L1M4 LINE L1 3797 3975 -2171 22 0 0 0 chr5 131999664 131999686 -71085846 + AT_rich Low_complexity Low_complexity 1 22 0 1640 155 42 0 chr5 131999687 131999952 -71085580 + AluSx SINE Alu 13 288 -24 2491 67 0 0 chr5 132000105 132000404 -71085128 - AluY SINE Alu -12 299 1 2262 107 3 0 chr5 132001113 132001411 -71084121 + AluSp SINE Alu 1 299 -14 2058 132 40 35 chr5 132002203 132002419 -71083113 - THE1C LTR MaLR -2 373 153 1873 141 39 0 chr5 132002419 132002702 -71082830 + AluSx SINE Alu 1 294 -18 2058 132 40 35 chr5 132002702 132002856 -71082676 - THE1C LTR MaLR -222 153 1 746 72 0 0 chr5 132003054 132003151 -71082381 - AluY SINE Alu -10 301 205 238 81 0 0 chr5 132003179 132003216 -71082316 + Alu SINE Alu 262 298 -2 793 161 0 36 chr5 132003436 132003573 -71081959 + FLAM_C SINE Alu 2 133 0 240 303 77 82 chr5 132003590 132003785 -71081747 - LTR67 LTR ERVL -246 311 118 959 132 0 36 chr5 132004701 132004868 -71080664 + Charlie3 DNA MER1_type 2546 2706 -4 285 182 0 18 chr5 132004862 132004917 -71080615 + MLT1A2 LTR MaLR 314 367 -7 * 264 284 0 40 chr5 132005580 132005654 -71079878 + MIR SINE MIR 39 109 -99 1382 182 3 39 chr5 132005992 132006278 -71079254 + AluJo SINE Alu 37 312 0 1887 217 119 42 chr5 132007897 132008570 -71076962 + MER50 LTR ERV1 10 734 0 291 275 60 48 chr5 132009019 132009186 -71076346 + MLT1K LTR MaLR 395 563 -25 26 0 0 0 chr5 132009357 132009383 -71076149 + AT_rich Low_complexity Low_complexity 1 26 0 721 331 19 0 chr5 132009473 132009730 -71075802 + MIR SINE MIR 1 262 0 726 94 0 79 chr5 132010257 132010290 -71075242 + L1PB2 LINE L1 5575 5609 -542 2433 78 0 0 chr5 132010290 132010585 -71074947 + AluY SINE Alu 1 295 -16 726 94 0 79 chr5 132010585 132010678 -71074854 + L1PB2 LINE L1 5609 5691 -460 679 165 0 55 chr5 132010680 132010807 -71074725 + FLAM_C SINE Alu 7 126 -17 3057 94 30 15 chr5 132010807 132011277 -71074255 + L1PB2 LINE L1 5675 6151 0 1071 158 0 0 chr5 132011437 132011595 -71073937 - FRAM SINE Alu -18 158 1 745 195 52 67 chr5 132011658 132012021 -71073511 - MLT1A1 LTR MaLR -63 311 3 195 139 0 0 chr5 132012233 132012269 -71073263 + (TG)n Simple_repeat Simple_repeat 1 36 0 290 321 119 31 chr5 132012301 132012881 -71072651 + L1M4 LINE L1 3327 3957 -2189 252 294 12 35 chr5 132013069 132013239 -71072293 + (CATATA)n Simple_repeat Simple_repeat 2 167 0 3258 87 0 9 chr5 132013934 132014372 -71071160 + MER57B LTR ERV1 1 434 0 2710 136 98 16 chr5 132014387 132014937 -71070595 + LTR49 LTR ERV1 1 595 0 487 250 62 6 chr5 132015107 132015267 -71070265 + L1MCa LINE L1 8 176 -6250 336 206 33 11 chr5 132015277 132015369 -71070163 + L1MCa LINE L1 265 358 -5549 * 1457 143 26 124 chr5 132015368 132015788 -71069744 + L1MB8 LINE L1 5800 6178 0 * 6261 245 45 28 chr5 132015780 132015832 -71069700 + L1M4 LINE L1 2269 2319 -3827 1815 158 0 29 chr5 132015832 132016142 -71069390 + AluJb SINE Alu 3 303 -9 6261 245 45 28 chr5 132016142 132016890 -71068642 + L1M4 LINE L1 2319 3053 -3093 246 32 0 0 chr5 132016890 132016921 -71068611 + (CAA)n Simple_repeat Simple_repeat 3 33 0 6261 245 45 28 chr5 132016921 132016932 -71068600 + L1M4 LINE L1 3053 3062 -3084 551 182 124 25 chr5 132016932 132017053 -71068479 + FLAM_C SINE Alu 1 133 0 6261 245 45 28 chr5 132017053 132017197 -71068335 + L1M4 LINE L1 3062 3202 -2944 1913 158 17 68 chr5 132017197 132017608 -71067924 + MLT1B LTR MaLR 1 390 0 6261 245 45 28 chr5 132017608 132018601 -71066931 + L1M4 LINE L1 3202 4263 -1883 396 0 0 0 chr5 132018601 132018645 -71066887 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 6261 245 45 28 chr5 132018645 132018866 -71066666 + L1M4 LINE L1 4263 4479 -1667 874 147 0 22 chr5 132018875 132019011 -71066521 + FLAM_C SINE Alu 1 133 0 352 227 0 6 chr5 132019032 132019117 -71066415 - L1MC3 LINE L1 -18 7977 7684 219 139 0 0 chr5 132019848 132019884 -71065648 + (TG)n Simple_repeat Simple_repeat 2 37 0 712 194 0 16 chr5 132019911 132020040 -71065492 - FLAM_C SINE Alu -14 129 3 701 207 0 0 chr5 132020165 132020286 -71065246 - FLAM_A SINE Alu -12 121 1 1896 159 3 7 chr5 132020456 132020757 -71064775 - AluJo SINE Alu -10 302 3 314 265 140 34 chr5 132021711 132021975 -71063557 + L2 LINE L2 1893 2184 -1130 1953 122 4 4 chr5 132022087 132022357 -71063175 + AluSx SINE Alu 18 287 -25 231 332 175 39 chr5 132022439 132022725 -71062807 + L2 LINE L2 2381 2705 -609 1300 95 11 11 chr5 132022845 132023024 -71062508 - AluSq SINE Alu -134 179 1 2022 108 44 10 chr5 132023394 132023690 -71061842 + AluSx SINE Alu 1 306 -6 1280 167 44 56 chr5 132023705 132023901 -71061631 + LTR56 LTR ERV1 138 300 -137 2503 60 0 3 chr5 132023901 132024203 -71061329 + AluY SINE Alu 2 302 -9 1280 167 44 56 chr5 132024203 132024340 -71061192 + LTR56 LTR ERV1 300 437 0 458 179 97 150 chr5 132024631 132024838 -71060694 - MIR SINE MIR -2 260 65 347 266 108 29 chr5 132025068 132025207 -71060325 - MIR SINE MIR -111 151 2 321 271 73 21 chr5 132025214 132025310 -71060222 + MLT1K LTR MaLR 182 282 -306 21 0 0 0 chr5 132025534 132025555 -71059977 + AT_rich Low_complexity Low_complexity 1 21 0 318 106 0 0 chr5 132026083 132026130 -71059402 + (CA)n Simple_repeat Simple_repeat 2 48 0 953 144 98 0 chr5 132026132 132026306 -71059226 + AluJb SINE Alu 117 307 -5 302 212 259 7 chr5 132026499 132026646 -71058886 + AluJ/FLAM SINE Alu 3 95 -207 672 179 0 17 chr5 132026651 132026768 -71058764 + FLAM_C SINE Alu 3 117 -16 30 27 0 0 chr5 132026768 132026805 -71058727 + AT_rich Low_complexity Low_complexity 1 37 0 715 162 0 8 chr5 132027940 132028057 -71057475 + FLAM_C SINE Alu 1 116 -17 2286 103 3 0 chr5 132028266 132028576 -71056956 + AluSx SINE Alu 1 311 -1 270 317 104 20 chr5 132028749 132028951 -71056581 - MIR SINE MIR -1 261 43 2178 108 3 3 chr5 132029585 132029890 -71055642 + AluSq SINE Alu 1 305 -8 1753 168 3 0 chr5 132030442 132030727 -71054805 + AluJb SINE Alu 1 286 -26 245 125 0 0 chr5 132031272 132031304 -71054228 - 5S rRNA rRNA 0 121 90 2122 101 7 3 chr5 132033624 132033911 -71051621 + AluSg SINE Alu 1 288 -22 2111 106 22 19 chr5 132033933 132034244 -71051288 + AluSq SINE Alu 1 312 -1 476 157 29 29 chr5 132034402 132034504 -71051028 + U13 snRNA snRNA 1 102 -2 2221 73 0 18 chr5 132034849 132035177 -71050355 + AluY SINE Alu 2 324 0 873 187 45 0 chr5 132035505 132035660 -71049872 + FRAM SINE Alu 1 162 -14 582 175 32 40 chr5 132035833 132035959 -71049573 + FLAM_A SINE Alu 18 142 0 535 75 0 0 chr5 132036101 132036168 -71049364 - Alu SINE Alu -14 296 230 1991 92 55 20 chr5 132036384 132036506 -71049026 + AluSx SINE Alu 1 117 -195 2116 124 7 3 chr5 132036506 132036812 -71048720 + AluSq SINE Alu 1 307 -6 1991 92 55 20 chr5 132036812 132036981 -71048551 + AluSx SINE Alu 117 302 -10 986 179 0 6 chr5 132037285 132037447 -71048085 + AluJb SINE Alu 135 295 -17 2401 68 0 13 chr5 132037484 132037791 -71047741 + AluY SINE Alu 1 303 -8 1461 167 23 90 chr5 132037953 132038307 -71047225 + MLT1B LTR MaLR 61 390 0 3833 261 56 3 chr5 132038308 132039300 -71046232 + L1M4 LINE L1 3202 4271 -1875 396 0 0 0 chr5 132039300 132039344 -71046188 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 3833 261 56 3 chr5 132039344 132039565 -71045967 + L1M4 LINE L1 4271 4479 -1667 715 176 0 63 chr5 132039574 132039716 -71045816 + FLAM_C SINE Alu 1 133 0 531 128 0 0 chr5 132039752 132039830 -71045702 - L1MC3 LINE L1 -29 7756 7679 813 260 46 41 chr5 132039834 132040245 -71045287 + L1MEc LINE L1 1914 2326 -4070 296 185 0 0 chr5 132040266 132040320 -71045212 + L1MEc LINE L1 2414 2467 -3748 2719 197 229 19 chr5 132040320 132040938 -71044594 + MER21B LTR ERV1 1 776 -87 300 53 0 0 chr5 132040938 132040976 -71044556 + (CTTG)n Simple_repeat Simple_repeat 1 38 0 2719 197 229 19 chr5 132040976 132041037 -71044495 + MER21B LTR ERV1 776 823 -40 1566 264 37 25 chr5 132041088 132041687 -71043845 + L1MEc LINE L1 2470 3075 -3140 831 155 0 8 chr5 132041687 132041816 -71043716 + AluJo SINE Alu 1 128 -174 574 156 52 10 chr5 132041823 132041919 -71043613 + AluJo SINE Alu 200 299 -13 767 190 0 0 chr5 132041954 132042070 -71043462 + FLAM_C SINE Alu 1 116 -17 920 247 120 9 chr5 132042081 132042539 -71042993 + L1MEc LINE L1 3073 3581 -2634 723 189 67 24 chr5 132042546 132042710 -71042822 + L1MEc LINE L1 3860 4030 -2185 399 204 68 0 chr5 132042734 132042822 -71042710 + L1MA8 LINE L1 6068 6161 -130 2937 148 43 0 chr5 132042843 132043336 -71042196 - MER73 LTR ERVL 0 644 131 820 122 50 0 chr5 132043374 132043513 -71042019 + L1MA9 LINE L1 6160 6305 -7 849 295 71 6 chr5 132043523 132043859 -71041673 + L1MEc LINE L1 4084 4441 -1774 1009 171 0 0 chr5 132044013 132044165 -71041367 + AluJo SINE Alu 137 288 -14 208 254 0 0 chr5 132044254 132044309 -71041223 + A-rich Low_complexity Low_complexity 1 55 0 249 83 0 0 chr5 132044458 132044494 -71041038 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 379 125 25 38 chr5 132044863 132044943 -71040589 + MER31-int LTR ERV1 1368 1446 -3490 25 0 0 0 chr5 132045186 132045211 -71040321 + AT_rich Low_complexity Low_complexity 1 25 0 1249 130 63 0 chr5 132045212 132045435 -71040097 + L1MD3 LINE L1 6880 7116 -879 406 189 0 53 chr5 132045436 132045531 -71040001 + MLT1F1 LTR MaLR 36 125 -442 693 263 53 5 chr5 132045815 132046024 -71039508 - HAL1 LINE L1 -7 2500 2282 540 220 56 36 chr5 132046109 132046249 -71039283 - MIR SINE MIR -65 143 19 275 244 130 30 chr5 132046282 132046413 -71039119 - HAL1 LINE L1 -305 2202 2059 7951 32 0 0 chr5 132046629 132047572 -71037960 - L1PA5 LINE L1 -8 6146 5206 767 188 8 0 chr5 132047672 132047800 -71037732 + FLAM_C SINE Alu 1 129 -4 909 145 0 0 chr5 132047972 132048103 -71037429 + FLAM_C SINE Alu 1 131 -12 1806 181 0 3 chr5 132048255 132048548 -71036984 - AluJo SINE Alu -20 292 1 2500 71 0 0 chr5 132048713 132049010 -71036522 + AluY SINE Alu 1 297 -14 825 136 0 0 chr5 132049077 132049195 -71036337 + AluSg/x SINE Alu 179 296 -16 2068 130 0 0 chr5 132050927 132051254 -71034278 + AluSx SINE Alu 1 327 0 1649 159 0 4 chr5 132052200 132052452 -71033080 - AluSx SINE Alu -31 281 31 1311 235 51 67 chr5 132052452 132053208 -71032324 - LTR1B LTR ERV1 0 826 1 255 277 31 0 chr5 132053208 132053248 -71032284 - AluSp SINE Alu -132 171 130 1171 119 5 31 chr5 132053563 132053634 -71031898 - HERVH LTR ERV1 -3720 3993 3922 2295 81 3 19 chr5 132053634 132053943 -71031589 + AluY SINE Alu 1 304 -7 1171 119 5 31 chr5 132053943 132054064 -71031468 - HERVH LTR ERV1 -3791 3922 3806 * 17644 131 7 28 chr5 132054058 132055368 -71030164 - HERVH LTR ERV1 -4126 3587 2251 2413 90 0 10 chr5 132055368 132055680 -71029852 + AluY SINE Alu 1 309 -2 17644 131 7 28 chr5 132055680 132057707 -71027825 - HERVH LTR ERV1 -5462 2251 1 2023 105 76 6 chr5 132057722 132058086 -71027446 - LTR7 LTR ERV1 0 450 1 776 154 101 13 chr5 132058483 132058632 -71026900 - MER5A DNA MER1_type 0 189 28 776 277 89 52 chr5 132059335 132059428 -71026104 + L2 LINE L2 2953 3041 -272 1689 187 0 0 chr5 132059428 132059701 -71025831 + AluJo SINE Alu 1 273 -39 776 277 89 52 chr5 132059701 132059954 -71025578 + L2 LINE L2 3041 3312 -1 1590 162 23 43 chr5 132059957 132060260 -71025272 - AluSx SINE Alu -15 297 1 22 0 0 0 chr5 132060908 132060930 -71024602 + AT_rich Low_complexity Low_complexity 1 22 0 306 279 72 36 chr5 132060940 132061051 -71024481 - L2 LINE L2 0 3313 3199 793 134 75 8 chr5 132061118 132061252 -71024280 + FAM SINE Alu 31 173 -12 2376 85 0 0 chr5 132062666 132062959 -71022573 - AluSg SINE Alu -17 293 1 21 57 0 0 chr5 132063011 132063046 -71022486 + AT_rich Low_complexity Low_complexity 1 35 0 522 219 25 8 chr5 132063180 132063299 -71022233 + Charlie7 DNA MER1_type 582 702 -1910 309 279 66 35 chr5 132063314 132063511 -71022021 + Charlie7 DNA MER1_type 2410 2612 0 500 219 28 51 chr5 132063562 132063612 -71021920 + L1PA15 LINE L1 3189 3239 -2907 2123 101 0 14 chr5 132063612 132063929 -71021603 + AluY SINE Alu 1 313 0 500 219 28 51 chr5 132063929 132064092 -71021440 + L1PA15 LINE L1 3239 3398 -2748 3733 188 13 11 chr5 132064101 132064882 -71020650 + L1PA15 LINE L1 3703 4484 -1662 5889 126 27 1 chr5 132064988 132066686 -71018846 + L1PA15 LINE L1 4432 6163 -2 2329 86 14 0 chr5 132067558 132067850 -71017682 + AluSp SINE Alu 2 297 -16 210 368 0 0 chr5 132068196 132068272 -71017260 + GA-rich Low_complexity Low_complexity 1 76 0 584 254 176 15 chr5 132068295 132068500 -71017032 - MIR SINE MIR -10 252 15 266 331 95 36 chr5 132068845 132069194 -71016338 - L2 LINE L2 -211 3061 2694 2231 117 0 26 chr5 132069525 132069834 -71015698 + AluSx SINE Alu 1 301 -11 10376 41 5 116 chr5 132069992 132071588 -71013944 + SVA Other Other 1 1423 0 2053 124 3 34 chr5 132072345 132072667 -71012865 + AluSx SINE Alu 1 312 0 5100 203 39 45 chr5 132072679 132073961 -71011571 + L1MC4a LINE L1 6395 7668 -140 * 15262 197 31 34 chr5 132073957 132075224 -71010308 + L1PA12 LINE L1 21 1290 -6294 186 103 0 0 chr5 132075224 132075253 -71010279 + (CAA)n Simple_repeat Simple_repeat 2 30 0 15262 197 31 34 chr5 132075253 132075742 -71009790 + L1PA12 LINE L1 1290 1779 -5805 2150 140 3 0 chr5 132075742 132076050 -71009482 + AluSx SINE Alu 1 309 -3 15262 197 31 34 chr5 132076050 132078480 -71007052 + L1PA12 LINE L1 1779 5335 -2249 4393 81 16 50 chr5 132078480 132079158 -71006374 - L1P LINE L1 -3648 2498 1844 202 125 0 25 chr5 132079250 132079290 -71006242 + (CCG)n Simple_repeat Simple_repeat 3 41 0 216 256 0 0 chr5 132079529 132079615 -71005917 + GA-rich Low_complexity Low_complexity 3 88 0 5394 144 0 10 chr5 132080395 132081288 -71004244 - L1P LINE L1 -4289 1857 974 19810 110 26 11 chr5 132081292 132084301 -71001231 + L1PA11 LINE L1 2508 5469 -705 1909 163 0 0 chr5 132084301 132084596 -71000936 + AluSx SINE Alu 1 295 -17 2284 78 0 24 chr5 132084600 132084930 -71000602 + AluY SINE Alu 1 311 0 19810 110 26 11 chr5 132084930 132085594 -70999938 + L1PA11 LINE L1 5471 6172 -2 241 163 0 0 chr5 132085594 132085637 -70999895 + L1MD3 LINE L1 7828 7870 -125 1875 220 26 35 chr5 132085637 132086064 -70999468 + LTR40b LTR ERVL 3 425 -37 3885 151 46 76 chr5 132086075 132086380 -70999152 + L1MB4 LINE L1 5328 5641 -539 338 25 0 0 chr5 132086380 132086420 -70999112 - MADE1 DNA Mariner -40 40 1 3885 151 46 76 chr5 132086420 132086948 -70998584 + L1MB4 LINE L1 5641 6174 -6 711 159 0 0 chr5 132087157 132087264 -70998268 - FRAM SINE Alu -30 146 40 2447 84 0 6 chr5 132088256 132088567 -70996965 - AluSg SINE Alu -1 309 1 778 266 49 36 chr5 132088733 132089038 -70996494 - MER102b DNA MER1_type -10 331 23 189 195 0 0 chr5 132089068 132089109 -70996423 + CT-rich Low_complexity Low_complexity 2 42 0 2073 116 0 20 chr5 132089446 132089583 -70995949 + AluSx SINE Alu 1 139 -173 2249 95 3 13 chr5 132089583 132089889 -70995643 + AluSp SINE Alu 1 303 -10 2073 116 0 20 chr5 132089889 132090054 -70995478 + AluSx SINE Alu 139 297 -15 22 35 0 0 chr5 132090083 132090112 -70995420 + AT_rich Low_complexity Low_complexity 1 29 0 246 254 17 0 chr5 132090116 132090175 -70995357 + L2 LINE L2 3213 3272 0 25 31 0 0 chr5 132090506 132090538 -70994994 + AT_rich Low_complexity Low_complexity 1 32 0 229 65 0 0 chr5 132091074 132091120 -70994412 - LTR66 LTR ERVL -171 439 394 240 325 86 8 chr5 132091543 132091660 -70993872 + L2 LINE L2 3147 3272 0 190 213 213 0 chr5 132093042 132093103 -70992429 + L2 LINE L2 2946 3019 -294 284 296 177 32 chr5 132093310 132093496 -70992036 - L2 LINE L2 -1028 2286 2074 366 310 117 80 chr5 132093777 132094264 -70991268 + L1M2 LINE L1 664 1168 -5681 184 217 109 0 chr5 132094757 132094803 -70990729 - MIR SINE MIR -67 141 91 860 247 96 14 chr5 132095591 132095935 -70989597 + LTR56 LTR ERV1 73 444 -1 478 232 140 12 chr5 132095977 132096141 -70989391 + L2 LINE L2 2475 2659 -655 246 224 0 0 chr5 132096730 132096779 -70988753 - MLT1E2 LTR MaLR 0 654 606 2148 103 10 13 chr5 132096779 132096953 -70988579 - AluSx SINE Alu -3 309 135 2944 13 0 0 chr5 132096953 132097271 -70988261 - AluYb8 SINE Alu 0 318 1 2148 103 10 13 chr5 132097271 132097406 -70988126 - AluSx SINE Alu -177 135 1 3398 112 40 39 chr5 132097421 132097518 -70988014 - MER41B LTR ERV1 -88 547 452 17133 37 1 1 chr5 132097518 132100247 -70985285 - L1PA5 LINE L1 0 6154 3429 3398 112 40 39 chr5 132100247 132100695 -70984837 - MER41B LTR ERV1 -183 452 1 17374 119 34 23 chr5 132100695 132102470 -70983062 - MER41B-int LTR ERV1 0 5946 4191 2199 134 0 0 chr5 132102470 132102775 -70982757 - AluSx SINE Alu -7 305 1 17374 119 34 23 chr5 132102775 132103737 -70981795 - MER41B-int LTR ERV1 -1755 4191 3240 2190 97 7 0 chr5 132103737 132104015 -70981517 + AluSg SINE Alu 1 280 -30 17374 119 34 23 chr5 132104015 132104049 -70981483 - MER41B-int LTR ERV1 -2706 3240 3208 9068 68 113 11 chr5 132104049 132105306 -70980226 + SVA Other Other 2 1386 0 17374 119 34 23 chr5 132105306 132105995 -70979537 - MER41B-int LTR ERV1 -2738 3208 1282 756 120 17 0 chr5 132105993 132106110 -70979422 - MER41B-int LTR ERV1 -3927 2019 1901 * 2039 127 55 26 chr5 132106111 132106457 -70979075 - MER41B-int LTR ERV1 -4184 1762 1407 4831 121 19 3 chr5 132106459 132107138 -70978394 - MER41B-int LTR ERV1 -5256 690 1 878 168 40 0 chr5 132107138 132107287 -70978245 - MER41B LTR ERV1 0 635 481 1368 253 153 20 chr5 132107335 132107838 -70977694 - MLT1E2 LTR MaLR -56 570 1 2044 108 10 54 chr5 132108153 132108467 -70977065 - AluSx SINE Alu -12 300 1 347 220 187 0 chr5 132109012 132109103 -70976429 - FLAM_A SINE Alu -8 125 18 315 125 58 0 chr5 132109231 132109335 -70976197 + (TA)n Simple_repeat Simple_repeat 1 110 0 1912 119 74 4 chr5 132109335 132109604 -70975928 - AluSx SINE Alu -24 288 1 247 239 303 49 chr5 132109776 132109918 -70975614 + MER5B DNA MER1_type 1 178 0 208 236 73 0 chr5 132110123 132110178 -70975354 + MER5B DNA MER1_type 120 178 0 21 0 0 0 chr5 132110526 132110547 -70974985 + AT_rich Low_complexity Low_complexity 1 21 0 464 240 58 58 chr5 132110570 132110724 -70974808 - MIR SINE MIR -10 252 99 2144 119 0 0 chr5 132110725 132111019 -70974513 + AluSx SINE Alu 3 296 -16 843 199 0 51 chr5 132111481 132111670 -70973862 - FRAM SINE Alu 0 180 1 4958 166 63 39 chr5 132111711 132111968 -70973564 + L1MC3 LINE L1 6729 6978 -807 1782 156 59 3 chr5 132111968 132112256 -70973276 + AluJo SINE Alu 3 306 -6 4958 166 63 39 chr5 132112256 132113030 -70972502 + L1MC3 LINE L1 6978 7785 0 605 100 0 0 chr5 132113164 132113244 -70972288 + U6 snRNA snRNA 1 80 -27 619 247 138 0 chr5 132113402 132113576 -70971956 + L1ME1 LINE L1 5524 5721 -445 1971 130 0 123 chr5 132113586 132113985 -70971547 - MLT1A1 LTR MaLR -15 350 1 1204 241 57 57 chr5 132113990 132114429 -70971103 + L1ME1 LINE L1 5723 6161 -5 2818 188 61 42 chr5 132114537 132115161 -70970371 - MER92B LTR ERV1 0 636 1 24 0 0 0 chr5 132116436 132116460 -70969072 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 132116813 132116838 -70968694 + AT_rich Low_complexity Low_complexity 1 25 0 201 182 23 0 chr5 132116891 132116935 -70968597 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 750 110 0 2 chr5 132118422 132118660 -70966872 + AluSx SINE Alu 9 295 -15 207 0 0 0 chr5 132119521 132119544 -70965988 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 813 173 0 58 chr5 132119588 132119727 -70965805 + FLAM_C SINE Alu 1 131 -2 2250 103 0 3 chr5 132119753 132120054 -70965478 + AluSc SINE Alu 1 300 -9 763 177 0 0 chr5 132120260 132120373 -70965159 + FLAM_C SINE Alu 6 118 -25 234 338 133 0 chr5 132121729 132121880 -70963652 - MIR3 SINE MIR -3 205 35 2094 130 13 3 chr5 132121910 132122211 -70963321 + AluSx SINE Alu 1 304 -8 747 215 105 0 chr5 132122341 132122541 -70962991 + L1MC4 LINE L1 7702 7922 -120 459 303 85 60 chr5 132122575 132122856 -70962676 - L2 LINE L2 -738 2576 2289 231 159 0 79 chr5 132122877 132122940 -70962592 - L1MC4 LINE L1 -1333 6709 6652 1761 171 7 0 chr5 132123310 132123608 -70961924 + AluJb SINE Alu 1 300 -12 404 313 5 39 chr5 132124008 132124161 -70961371 - MIR SINE MIR -66 142 18 2070 78 48 0 chr5 132124456 132124726 -70960806 + AluSp SINE Alu 29 311 -2 2252 111 7 0 chr5 132124752 132125050 -70960482 + AluSx SINE Alu 1 300 -12 840 209 0 12 chr5 132125688 132125851 -70959681 + FRAM SINE Alu 1 160 -16 2123 110 17 3 chr5 132126196 132126497 -70959035 - AluSx SINE Alu -2 310 6 265 308 11 44 chr5 132127208 132127299 -70958233 + MER102b DNA MER1_type 3 90 -251 271 205 18 143 chr5 132127301 132127413 -70958119 + MER102b DNA MER1_type 233 330 -11 203 245 0 20 chr5 132128087 132128099 -70957433 + GA-rich Low_complexity Low_complexity 3 14 -36 1566 158 16 66 chr5 132128099 132128416 -70957116 + AluJo SINE Alu 1 301 -11 203 245 0 20 chr5 132128416 132128452 -70957080 + GA-rich Low_complexity Low_complexity 14 50 0 185 313 24 60 chr5 132128529 132128612 -70956920 - MIR SINE MIR -163 99 20 1323 120 14 10 chr5 132128839 132129048 -70956484 - MER2 DNA MER2_type -135 210 1 194 279 0 16 chr5 132129048 132129109 -70956423 - MIR SINE MIR -108 154 95 221 210 28 7 chr5 132129591 132129639 -70955893 - MIR SINE MIR -132 76 28 13596 99 12 1 chr5 132129891 132129910 -70955622 - L1P LINE L1 -773 5381 5364 5545 44 0 2 chr5 132129910 132130542 -70954990 - L1PA8 LINE L1 -10 6162 5532 13596 99 12 1 chr5 132130542 132132451 -70953081 - L1P LINE L1 -790 5364 3430 2253 116 0 0 chr5 132132762 132133065 -70952467 - AluSx SINE Alu -9 303 1 195 139 0 0 chr5 132133577 132133613 -70951919 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 720 268 15 24 chr5 132133905 132134110 -70951422 - LTR16C LTR ERVL -13 478 276 420 280 8 0 chr5 132134141 132134259 -70951273 + L1MC4a LINE L1 6477 6595 -1213 21 71 0 0 chr5 132134549 132134591 -70950941 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 132134717 132134746 -70950786 + AT_rich Low_complexity Low_complexity 1 29 0 1452 193 42 0 chr5 132134790 132135054 -70950478 + AluJo SINE Alu 1 275 -37 23 33 0 0 chr5 132135061 132135091 -70950441 + AT_rich Low_complexity Low_complexity 1 30 0 2196 133 0 0 chr5 132135097 132135399 -70950133 + AluSx SINE Alu 1 302 -10 747 114 0 0 chr5 132135460 132135565 -70949967 + MSTD LTR MaLR 1 105 -291 2337 62 3 0 chr5 132135646 132135934 -70949598 + AluY SINE Alu 21 309 -2 2224 123 3 3 chr5 132136188 132136497 -70949035 - AluSx SINE Alu -3 309 1 451 74 0 49 chr5 132136660 132136741 -70948791 - THE1-int LTR MaLR 0 1580 1504 246 315 0 14 chr5 132137147 132137220 -70948312 + L2 LINE L2 2203 2274 -1040 235 321 0 37 chr5 132137226 132137307 -70948225 + L2 LINE L2 2994 3071 -201 327 255 11 32 chr5 132137321 132137415 -70948117 + MER112 DNA MER1_type 5 96 -164 390 247 11 11 chr5 132137424 132137513 -70948019 - L2 LINE L2 -35 3278 3190 * 1221 256 54 35 chr5 132137508 132138109 -70947423 + L2 LINE L2 2632 3240 -73 557 236 122 0 chr5 132138121 132138269 -70947263 + MER112 DNA MER1_type 89 254 -6 279 0 0 0 chr5 132138323 132138354 -70947178 + (TG)n Simple_repeat Simple_repeat 2 32 0 211 375 0 34 chr5 132138357 132138445 -70947087 + L2 LINE L2 3143 3227 -45 2402 82 10 0 chr5 132139162 132139466 -70946066 + AluSg SINE Alu 1 307 -3 552 211 125 13 chr5 132139705 132139857 -70945675 + MER69A DNA AcHobo 2 170 -7 1905 106 4 4 chr5 132140320 132140575 -70944957 + AluSx SINE Alu 47 301 -11 2161 181 30 28 chr5 132140575 132140907 -70944625 + L1MC3 LINE L1 7321 7656 -129 2445 85 3 0 chr5 132140907 132141214 -70944318 - AluSp SINE Alu -5 308 1 2161 181 30 28 chr5 132141214 132141345 -70944187 + L1MC3 LINE L1 7656 7785 0 1580 115 4 50 chr5 132142128 132142407 -70943125 - AluSx SINE Alu -8 304 39 2446 91 0 0 chr5 132142476 132142785 -70942747 - AluSx SINE Alu -1 311 3 23 0 0 0 chr5 132142887 132142910 -70942622 + AT_rich Low_complexity Low_complexity 1 23 0 2165 102 3 0 chr5 132143572 132143867 -70941665 + AluSq SINE Alu 1 296 -17 2240 106 20 0 chr5 132144411 132144712 -70940820 - AluSq SINE Alu -6 307 1 420 20 0 0 chr5 132144725 132144774 -70940758 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 2131 99 0 7 chr5 132144774 132145057 -70940475 - AluSq SINE Alu -32 281 1 1716 166 3 39 chr5 132145112 132145249 -70940283 + AluJb SINE Alu 1 141 -171 2307 119 0 0 chr5 132145249 132145560 -70939972 + AluSq SINE Alu 1 311 -2 1716 166 3 39 chr5 132145560 132145730 -70939802 + AluJb SINE Alu 141 297 -15 776 277 89 52 chr5 132145733 132145986 -70939546 - L2 LINE L2 -1 3312 3041 1689 187 0 0 chr5 132145986 132146259 -70939273 - AluJo SINE Alu -39 273 1 776 277 89 52 chr5 132146259 132146352 -70939180 - L2 LINE L2 -272 3041 2953 776 154 101 13 chr5 132147055 132147204 -70938328 + MER5A DNA MER1_type 28 189 0 1843 101 75 25 chr5 132147601 132147972 -70937560 + LTR7 LTR ERV1 1 450 0 3120 121 16 31 chr5 132147987 132148712 -70936820 + HERVH LTR ERV1 2 1034 -6679 2210 94 7 0 chr5 132148880 132149168 -70936364 - AluSp SINE Alu -23 290 1 21 0 0 0 chr5 132149456 132149477 -70936055 + AT_rich Low_complexity Low_complexity 1 21 0 729 223 8 0 chr5 132149481 132149611 -70935921 + FLAM_A SINE Alu 2 132 -1 2116 119 3 3 chr5 132149652 132149947 -70935585 + AluSg SINE Alu 1 295 -15 2361 101 0 0 chr5 132150622 132150929 -70934603 + AluSg SINE Alu 4 310 0 459 0 0 0 chr5 132150929 132150980 -70934552 + (TA)n Simple_repeat Simple_repeat 2 52 0 31 76 0 0 chr5 132151624 132151690 -70933842 + AT_rich Low_complexity Low_complexity 1 66 0 2355 89 3 3 chr5 132151998 132152301 -70933231 - AluSx SINE Alu -9 303 1 305 153 4 4 chr5 132152301 132152357 -70933175 - Alu SINE Alu -256 44 2 224 150 33 100 chr5 132152615 132152675 -70932857 - L2 LINE L2 -3 3310 3255 910 134 8 15 chr5 132152803 132152937 -70932595 - FLAM_C SINE Alu 0 133 1 310 299 22 66 chr5 132152998 132153090 -70932442 - MIR SINE MIR -16 246 160 2119 92 7 59 chr5 132153090 132153393 -70932139 - AluSx SINE Alu -25 287 1 310 299 22 66 chr5 132153393 132153437 -70932095 - MIR SINE MIR -102 160 116 2072 129 7 0 chr5 132153569 132153864 -70931668 + AluSx SINE Alu 11 307 -5 25 31 0 0 chr5 132153902 132153934 -70931598 + AT_rich Low_complexity Low_complexity 1 32 0 309 232 134 12 chr5 132154094 132154176 -70931356 - MIR SINE MIR -166 96 5 1825 158 16 10 chr5 132154931 132155234 -70930298 - AluJo SINE Alu -7 305 1 232 333 111 0 chr5 132155249 132155339 -70930193 - MIR SINE MIR -132 130 31 2237 121 0 9 chr5 132155635 132155950 -70929582 + AluSx SINE Alu 1 312 0 1646 179 30 7 chr5 132156207 132156504 -70929028 + AluJb SINE Alu 1 304 -8 1880 167 0 20 chr5 132157418 132157723 -70927809 - AluJo SINE Alu -13 299 1 280 200 44 111 chr5 132157740 132157830 -70927702 - AluJ/FLAM SINE Alu -214 88 5 2484 102 5 88 chr5 132157981 132158197 -70927335 + LTR26B LTR ERV1 1 167 -364 2373 76 0 0 chr5 132158197 132158487 -70927045 + AluSx SINE Alu 17 306 -6 2484 102 5 88 chr5 132158487 132158691 -70926841 + LTR26B LTR ERV1 167 386 -145 602 152 0 0 chr5 132158689 132158781 -70926751 + THE1B LTR MaLR 194 285 -79 * 192 135 0 0 chr5 132158913 132158950 -70926582 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 1069 157 6 0 chr5 132159256 132159415 -70926117 + LTR26B LTR ERV1 372 531 0 432 230 37 74 chr5 132159507 132159642 -70925890 - MER110-int LTR ERV1 -3291 1356 1227 2366 73 0 0 chr5 132159896 132160183 -70925349 - AluY SINE Alu -9 302 16 1461 197 101 70 chr5 132160290 132160316 -70925216 + LTR48 LTR ERV1 1 25 -619 1439 160 110 39 chr5 132160316 132160598 -70924934 + AluJo SINE Alu 1 302 -10 1461 197 101 70 chr5 132160598 132160771 -70924761 + LTR48 LTR ERV1 25 191 -453 1642 110 0 18 chr5 132160771 132160998 -70924534 + AluSg/x SINE Alu 85 307 -5 1461 197 101 70 chr5 132160998 132161456 -70924076 + LTR48 LTR ERV1 191 644 0 345 310 58 0 chr5 132161498 132161585 -70923947 - MER110-int LTR ERV1 -3843 804 713 1192 167 87 154 chr5 132161586 132161726 -70923806 + MLT1A1 LTR MaLR 1 149 -216 2553 64 0 16 chr5 132161726 132162038 -70923494 - AluSx SINE Alu -5 307 1 1192 167 87 154 chr5 132162038 132162067 -70923465 + MLT1A1 LTR MaLR 149 178 -187 740 193 8 0 chr5 132162067 132162186 -70923346 + FLAM_A SINE Alu 3 122 -11 1192 167 87 154 chr5 132162186 132162430 -70923102 + MLT1A1 LTR MaLR 178 362 -3 620 248 13 13 chr5 132162430 132162587 -70922945 - MER110-int LTR ERV1 -3932 715 559 886 168 0 0 chr5 132162625 132162756 -70922776 - FLAM_A SINE Alu -2 131 1 1829 160 3 7 chr5 132162935 132163222 -70922310 + AluJb SINE Alu 1 286 -26 1148 197 75 81 chr5 132163255 132163610 -70921922 + MER110A LTR ERV1 156 491 0 1798 173 3 3 chr5 132163690 132163990 -70921542 - AluJo SINE Alu -12 300 1 415 179 0 13 chr5 132164177 132164255 -70921277 + L1MC1 LINE L1 6008 6084 -249 1566 124 88 4 chr5 132164256 132164506 -70921026 - MER4E LTR ERV1 -1 765 495 1184 65 0 0 chr5 132164506 132164645 -70920887 + AluSq/x SINE Alu 2 140 -173 318 100 0 0 chr5 132164658 132164708 -70920824 + Alu SINE Alu 249 298 -2 860 158 84 40 chr5 132164708 132165018 -70920514 - MER4B LTR ERV1 -258 505 1 1503 153 16 24 chr5 132165018 132165273 -70920259 + L1MC1 LINE L1 6081 6333 0 246 91 0 0 chr5 132165273 132165306 -70920226 + MER53 DNA DNA 26 58 -131 319 159 0 0 chr5 132165306 132165350 -70920182 + Alu SINE Alu 1 44 -258 1514 98 5 0 chr5 132165350 132165553 -70919979 + AluSg/x SINE Alu 90 293 -17 620 88 109 68 chr5 132165553 132165638 -70919894 - MER53 DNA DNA -35 154 59 1900 154 3 7 chr5 132165638 132165931 -70919601 + AluSx SINE Alu 1 292 -20 620 88 109 68 chr5 132165931 132165992 -70919540 - MER53 DNA DNA -130 59 2 371 172 0 0 chr5 132166233 132166297 -70919235 - U3 snRNA snRNA -149 68 5 2376 86 3 0 chr5 132166656 132166959 -70918573 + AluSx SINE Alu 1 304 -8 430 248 23 120 chr5 132167389 132167631 -70917901 + MLT1L LTR MaLR 108 401 -214 750 129 0 86 chr5 132167689 132167829 -70917703 - FLAM_A SINE Alu -4 138 11 54 16 0 0 chr5 132167833 132167894 -70917638 + AT_rich Low_complexity Low_complexity 1 61 0 226 246 46 0 chr5 132167894 132167959 -70917573 + MLT1L LTR MaLR 535 602 -13 311 71 0 0 chr5 132168286 132168328 -70917204 - L1MB8 LINE L1 -6 6172 6131 188 364 155 16 chr5 132169161 132169658 -70915874 + L2 LINE L2 1843 2408 -906 2437 96 3 0 chr5 132169732 132170044 -70915488 - AluSq SINE Alu 0 313 1 694 151 24 48 chr5 132170222 132170348 -70915184 - FLAM_C SINE Alu -18 125 3 2416 68 3 0 chr5 132170916 132171209 -70914323 + AluY SINE Alu 1 294 -17 496 167 0 0 chr5 132171466 132171538 -70913994 + AluJ/FLAM SINE Alu 2 73 -239 351 27 82 0 chr5 132171569 132171642 -70913890 + (TA)n Simple_repeat Simple_repeat 2 80 0 435 301 318 28 chr5 132374188 132375465 -70710067 - L2 LINE L2 -337 2977 1331 2186 98 24 0 chr5 132375889 132376184 -70709348 - AluSx SINE Alu -10 302 1 583 223 8 8 chr5 132376516 132376646 -70708886 + FLAM_A SINE Alu 1 130 -3 4208 187 112 11 chr5 132378495 132379457 -70706075 + Tigger6a DNA MER2_type 24 1082 -1 271 355 80 20 chr5 132379482 132379682 -70705850 + L2 LINE L2 289 500 -2814 185 156 0 0 chr5 132379687 132379719 -70705813 - L2 LINE L2 0 3313 3282 421 184 0 15 chr5 132379719 132379810 -70705722 - L1MCa LINE L1 -4702 2257 2134 265 250 0 163 chr5 132379793 132379965 -70705567 - L1MCa LINE L1 -5703 1156 1013 * 266 296 136 35 chr5 132380056 132380255 -70705277 - L1MCa LINE L1 -6630 229 11 777 311 259 27 chr5 132380303 132381881 -70703651 + L2 LINE L2 1331 3313 0 246 62 0 0 chr5 132382115 132382147 -70703385 + (ATG)n Simple_repeat Simple_repeat 1 32 0 31 76 0 0 chr5 132382205 132382271 -70703261 + AT_rich Low_complexity Low_complexity 1 66 0 638 157 37 30 chr5 132382994 132383128 -70702404 + AluJb SINE Alu 1 135 -177 3682 178 71 3 chr5 132383130 132383280 -70702252 + L1MB3 LINE L1 5321 5459 -724 192 40 0 0 chr5 132383280 132383305 -70702227 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3682 178 71 3 chr5 132383305 132383903 -70701629 + L1MB3 LINE L1 5459 6120 -63 701 162 22 29 chr5 132384511 132384647 -70700885 + AluJb SINE Alu 1 135 -177 4308 169 42 20 chr5 132384649 132385493 -70700039 + L1MB3 LINE L1 5321 6182 -1 1163 292 83 10 chr5 132385558 132386083 -70699449 - L1MC4a LINE L1 -340 5825 5580 547 261 67 24 chr5 132386391 132386644 -70698888 + HAL1 LINE L1 1908 2171 -336 428 188 113 15 chr5 132386673 132386806 -70698726 + HAL1 LINE L1 2238 2383 -124 1557 103 31 0 chr5 132386959 132387182 -70698350 + MER30 DNA MER1_type 1 230 0 2339 90 0 0 chr5 132387723 132388024 -70697508 - AluSx SINE Alu -8 304 4 638 301 23 0 chr5 132388051 132388227 -70697305 - MER58A DNA MER1_type -44 180 1 1393 152 30 4 chr5 132388298 132388562 -70696970 + L1 LINE L1 4568 4838 -1308 * 11858 171 11 11 chr5 132388546 132388628 -70696904 - L1PA14 LINE L1 -51 6110 6030 1732 189 0 3 chr5 132388628 132388925 -70696607 - AluJb SINE Alu -16 296 1 11858 171 11 11 chr5 132388925 132391997 -70693535 - L1PA14 LINE L1 -131 6030 2959 793 231 0 81 chr5 132392036 132392167 -70693365 + MER58A DNA MER1_type 2 142 -2278 1085 183 193 32 chr5 132392167 132392321 -70693211 + MER46B DNA MER2_type 1 129 -2602 2030 96 4 4 chr5 132392321 132392591 -70692941 + AluSx SINE Alu 17 286 -26 417 110 0 0 chr5 132392591 132392664 -70692868 + (TA)n Simple_repeat Simple_repeat 2 74 0 1085 183 193 32 chr5 132392664 132392819 -70692713 + MER46B DNA MER2_type 128 236 0 793 231 0 81 chr5 132392819 132392921 -70692611 + MER58A DNA MER1_type 142 216 -8 21 0 0 0 chr5 132392957 132392978 -70692554 + AT_rich Low_complexity Low_complexity 1 21 0 2318 76 0 7 chr5 132393542 132393856 -70691676 - AluY SINE Alu 0 312 1 1891 164 0 3 chr5 132393863 132394173 -70691359 - AluSx SINE Alu -3 309 1 309 195 98 24 chr5 132394431 132394513 -70691019 - MER5C DNA MER1_type -236 88 1 30 27 0 0 chr5 132395155 132395192 -70690340 + AT_rich Low_complexity Low_complexity 1 37 0 198 71 0 0 chr5 132395957 132395985 -70689547 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 24 85 0 0 chr5 132397000 132397059 -70688473 + AT_rich Low_complexity Low_complexity 1 59 0 2170 104 3 7 chr5 132397248 132397547 -70687985 - AluSq SINE Alu -15 298 1 2215 112 0 0 chr5 132397936 132398239 -70687293 - AluSp SINE Alu -10 303 1 509 265 12 19 chr5 132398420 132398464 -70687068 - L1MA10 LINE L1 -7 6327 6284 2472 226 56 42 chr5 132398464 132399074 -70686458 - L1ME1 LINE L1 -44 6122 5522 1815 158 14 7 chr5 132399074 132399371 -70686161 - AluJb SINE Alu -13 299 1 2472 226 56 42 chr5 132399371 132399686 -70685846 - L1ME1 LINE L1 -644 5522 5213 1575 156 87 21 chr5 132399686 132399974 -70685558 - AluSx SINE Alu -5 307 1 2472 226 56 42 chr5 132399974 132400455 -70685077 - L1ME1 LINE L1 -953 5213 4697 1921 219 83 30 chr5 132400462 132401284 -70684248 - L1ME1 LINE L1 -1949 4197 3295 211 247 108 32 chr5 132401520 132401613 -70683919 + MIR SINE MIR 48 147 -61 3179 152 30 3 chr5 132401764 132402330 -70683202 - L1MB3 LINE L1 -9 6174 5594 2011 306 146 60 chr5 132402572 132404287 -70681245 + L2 LINE L2 991 2853 -461 284 269 22 52 chr5 132404331 132404465 -70681067 - MER5A DNA MER1_type -59 130 1 1523 133 48 121 chr5 132405022 132405352 -70680180 - AluSx SINE Alu -6 306 1 2031 116 16 13 chr5 132405535 132405845 -70679687 + AluSq SINE Alu 1 311 -2 193 277 64 0 chr5 132406066 132406113 -70679419 + MIR SINE MIR 91 140 -68 481 207 314 0 chr5 132406118 132406258 -70679274 + MER58C DNA MER1_type 9 192 -23 22 35 0 0 chr5 132406840 132406869 -70678663 + AT_rich Low_complexity Low_complexity 1 29 0 844 136 0 0 chr5 132407818 132407943 -70677589 + AluJb SINE Alu 1 125 -187 2262 60 0 18 chr5 132408142 132408482 -70677050 - AluSc SINE Alu 0 335 1 306 172 17 0 chr5 132408606 132408664 -70676868 - LTR40b LTR ERVL 0 462 404 1308 235 70 36 chr5 132408745 132409132 -70676400 - LTR40b LTR ERVL -62 400 1 1531 178 29 7 chr5 132409280 132409591 -70675941 - AluJb SINE Alu 0 317 1 25 0 0 0 chr5 132409781 132409806 -70675726 + AT_rich Low_complexity Low_complexity 1 25 0 1135 234 15 65 chr5 132411088 132411426 -70674106 + MER58B DNA MER1_type 21 341 0 21 71 0 0 chr5 132411499 132411541 -70673991 + AT_rich Low_complexity Low_complexity 1 42 0 214 339 59 25 chr5 132411936 132412054 -70673478 - MIR SINE MIR -65 143 22 559 313 121 32 chr5 132412326 132412781 -70672751 + L2 LINE L2 2657 3185 -128 2169 120 0 0 chr5 132412781 132413080 -70672452 - AluSx SINE Alu -13 299 1 559 313 121 32 chr5 132413080 132413209 -70672323 + L2 LINE L2 3185 3301 -12 21 0 0 0 chr5 132414060 132414081 -70671451 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 132415170 132415191 -70670341 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 132415625 132415654 -70669878 + AT_rich Low_complexity Low_complexity 1 29 0 1573 243 128 30 chr5 132416241 132416922 -70668610 - MER21B LTR ERV1 -58 805 1 5666 183 56 68 chr5 132417043 132418613 -70666919 - MER31-int LTR ERV1 -818 4118 2603 21 82 0 0 chr5 132418630 132418679 -70666853 + AT_rich Low_complexity Low_complexity 1 49 0 746 137 0 43 chr5 132418752 132418891 -70666641 + FLAM_C SINE Alu 1 133 0 1397 230 113 71 chr5 132418966 132419886 -70665646 - MER31-int LTR ERV1 -2351 2585 1627 1309 206 124 32 chr5 132419907 132420314 -70665218 - MER31-int LTR ERV1 -3482 1454 1052 2017 101 11 0 chr5 132420314 132420616 -70664916 + AluSg SINE Alu 1 305 0 1309 206 124 32 chr5 132420616 132420811 -70664721 - MER31-int LTR ERV1 -3884 1052 876 1617 204 14 39 chr5 132421311 132421673 -70663859 - MER93b LTR ERV1 -11 362 10 933 203 6 23 chr5 132421675 132421852 -70663680 - FAM SINE Alu -1 174 1 555 297 55 0 chr5 132422181 132422363 -70663169 - MIR SINE MIR -17 245 54 694 192 8 8 chr5 132422400 132422530 -70663002 + FLAM_A SINE Alu 1 130 -3 29 0 0 0 chr5 132422734 132422763 -70662769 + AT_rich Low_complexity Low_complexity 1 29 0 275 250 131 0 chr5 132423476 132423560 -70661972 + MER5A DNA MER1_type 9 103 -86 691 192 78 6 chr5 132423657 132423824 -70661708 + MER58A DNA MER1_type 42 220 -4 307 163 291 12 chr5 132423896 132423982 -70661550 - MER66B LTR ERV1 -90 396 287 233 336 7 81 chr5 132424434 132424583 -70660949 + L2 LINE L2 2625 2762 -552 349 204 53 35 chr5 132424974 132425087 -70660445 + HAL1 LINE L1 970 1084 -1423 409 281 116 59 chr5 132425224 132425697 -70659835 + HAL1 LINE L1 1255 1754 -753 360 342 142 7 chr5 132425839 132426383 -70659149 + L1ME4a LINE L1 5391 6016 -105 27 29 0 0 chr5 132426978 132427012 -70658520 + AT_rich Low_complexity Low_complexity 1 34 0 27 29 0 0 chr5 132427596 132427630 -70657902 + AT_rich Low_complexity Low_complexity 1 34 0 366 217 28 107 chr5 132428990 132429177 -70656355 + L1MC4 LINE L1 7730 7790 -18 2379 91 0 10 chr5 132429988 132430296 -70655236 + AluSq SINE Alu 1 305 -8 1549 160 4 23 chr5 132430300 132430556 -70654976 + AluJo SINE Alu 1 251 -61 21 57 0 0 chr5 132430556 132430591 -70654941 + AT_rich Low_complexity Low_complexity 1 35 0 914 189 66 0 chr5 132431073 132431285 -70654247 + L1ME3 LINE L1 4089 4314 -1832 817 163 182 5 chr5 132431285 132431488 -70654044 - Tigger2 DNA MER2_type -10 2708 2470 2338 63 10 13 chr5 132431565 132431867 -70653665 + AluY SINE Alu 1 301 -10 3910 131 44 7 chr5 132431873 132432596 -70652936 - Tigger2 DNA MER2_type -1968 750 1 2360 216 50 16 chr5 132432596 132433303 -70652229 + L1ME3 LINE L1 4313 5043 -1103 868 199 29 15 chr5 132433305 132433511 -70652021 + L1ME3 LINE L1 5946 6154 -8 612 281 125 5 chr5 132433560 132433784 -70651748 - MIR SINE MIR -9 253 3 1270 232 159 10 chr5 132433877 132434360 -70651172 - L1MEc LINE L1 -5257 1139 585 723 250 59 19 chr5 132434378 132434634 -70650898 - L1MEc LINE L1 -6121 275 10 237 372 41 21 chr5 132435354 132435499 -70650033 - MER5A DNA MER1_type -6 183 36 2182 89 7 17 chr5 132435835 132436137 -70649395 - AluSc SINE Alu -10 299 1 2184 128 3 0 chr5 132436916 132437228 -70648304 - AluSp SINE Alu 0 313 1 246 128 0 0 chr5 132438086 132438125 -70647407 + (TG)n Simple_repeat Simple_repeat 2 40 0 23 54 0 0 chr5 132438434 132438471 -70647061 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr5 132438629 132438651 -70646881 + AT_rich Low_complexity Low_complexity 1 22 0 332 259 107 65 chr5 132440158 132440374 -70645158 + L1ME LINE L1 5314 5538 -2270 291 237 106 56 chr5 132440428 132440507 -70645025 + L1ME LINE L1 5635 5709 -412 2128 137 3 13 chr5 132440507 132440822 -70644710 + AluSx SINE Alu 1 312 0 291 237 106 56 chr5 132440822 132440924 -70644608 + L1ME LINE L1 5709 5826 -295 2872 115 111 4 chr5 132441326 132441804 -70643728 + MER1A DNA MER1_type 1 529 0 1529 184 47 4 chr5 132443427 132443704 -70641828 + AluJb SINE Alu 1 289 -23 1726 156 14 35 chr5 132443717 132444006 -70641526 + AluJb SINE Alu 11 293 -19 485 216 72 0 chr5 132444339 132444450 -70641082 + MLT1B-int LTR MaLR 938 1056 -315 318 196 33 0 chr5 132444448 132444540 -70640992 + L1MEc LINE L1 790 884 -5512 * 2446 71 0 6 chr5 132444547 132444858 -70640674 + AluY SINE Alu 1 309 -2 1228 199 22 67 chr5 132444859 132444931 -70640601 + L1M2a LINE L1 19 93 -7075 1684 152 31 31 chr5 132444931 132445220 -70640312 + AluJo SINE Alu 3 291 -21 1228 199 22 67 chr5 132445220 132445459 -70640073 + L1M2a LINE L1 93 316 -6852 216 0 0 0 chr5 132445461 132445485 -70640047 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5158 138 69 4 chr5 132445486 132447121 -70638411 + L1PA14 LINE L1 10 1894 -4969 1115 269 81 40 chr5 132447166 132447631 -70637901 + L1MEc LINE L1 878 1392 -5004 1857 133 3 37 chr5 132447631 132447925 -70637607 - AluJo SINE Alu -28 284 1 1115 269 81 40 chr5 132447925 132448277 -70637255 + L1MEc LINE L1 1392 1728 -4668 1079 153 0 5 chr5 132448272 132448468 -70637064 + L1PA14 LINE L1 5290 5484 -1378 * 5443 110 29 22 chr5 132448474 132449738 -70635794 + L1PA14 LINE L1 5604 6873 -4 1828 123 4 0 chr5 132449744 132449996 -70635536 - AluSg SINE Alu -57 253 1 255 269 54 47 chr5 132450046 132450195 -70635337 + L1MEc LINE L1 1713 1862 -4534 846 80 0 0 chr5 132450210 132450322 -70635210 + AluSg/x SINE Alu 197 308 -2 437 133 10 0 chr5 132450334 132450432 -70635100 + (TA)n Simple_repeat Simple_repeat 1 99 0 23 33 0 0 chr5 132450443 132450473 -70635059 + AT_rich Low_complexity Low_complexity 1 30 0 1563 160 41 55 chr5 132450547 132450910 -70634622 + MLT1B LTR MaLR 1 358 -32 1562 252 53 40 chr5 132451022 132451554 -70633978 - MLT1H1 LTR MaLR -16 539 1 2021 118 21 0 chr5 132451719 132452007 -70633525 - AluSx SINE Alu -18 294 1 2309 55 14 7 chr5 132452724 132453014 -70632518 - AluY SINE Alu -19 292 1 199 302 78 43 chr5 132454253 132454369 -70631163 + L2 LINE L2 2976 3095 -177 1304 186 76 92 chr5 132454932 132455390 -70630142 + LTR45B LTR ERV1 27 477 -12 26 30 0 0 chr5 132455562 132455595 -70629937 + AT_rich Low_complexity Low_complexity 1 33 0 181 344 69 23 chr5 132456385 132456516 -70629016 - MIR SINE MIR -76 186 50 1420 190 139 144 chr5 132456857 132457482 -70628050 - MLT1E2 LTR MaLR 0 626 5 230 333 69 48 chr5 132457551 132457740 -70627792 + L2 LINE L2 2686 2878 -436 222 250 38 50 chr5 132457789 132457869 -70627663 + L2 LINE L2 2992 3070 -202 381 304 30 30 chr5 132457993 132458128 -70627404 + MIR SINE MIR 54 188 -74 256 270 151 16 chr5 132458623 132458749 -70626783 - MIR SINE MIR -7 255 113 288 263 42 0 chr5 132458904 132459022 -70626510 + (CCCCG)n Simple_repeat Simple_repeat 1 123 0 258 32 0 0 chr5 132459728 132459759 -70625773 + (TG)n Simple_repeat Simple_repeat 2 32 0 811 106 0 0 chr5 132460733 132460837 -70624695 - FLAM_A SINE Alu -21 121 18 287 180 0 0 chr5 132462576 132462626 -70622906 - L2 LINE L2 0 3272 3223 184 219 109 0 chr5 132462594 132462658 -70622874 - MIR SINE MIR -12 250 180 * 444 203 81 32 chr5 132463395 132463518 -70622014 + MIR SINE MIR 59 187 -75 180 0 0 0 chr5 132464326 132464346 -70621186 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr5 132465295 132465323 -70620209 + AT_rich Low_complexity Low_complexity 1 28 0 2353 105 0 0 chr5 132466407 132466711 -70618821 - AluSx SINE Alu -8 304 1 1619 191 65 14 chr5 132466766 132467137 -70618395 - MLT1B LTR MaLR 0 390 1 1597 173 17 40 chr5 132467158 132467504 -70618028 - MER44D DNA MER2_type -1 608 1 235 262 48 62 chr5 132467636 132467781 -70617751 - L1MEc LINE L1 -4596 1967 1825 851 185 15 41 chr5 132467792 132467960 -70617572 - MLT1B LTR MaLR -200 190 26 1575 158 43 72 chr5 132467960 132468334 -70617198 - MLT1A1 LTR MaLR -2 363 1 851 185 15 41 chr5 132468334 132468360 -70617172 - MLT1B LTR MaLR -364 26 1 219 69 0 0 chr5 132468631 132468660 -70616872 + (GA)n Simple_repeat Simple_repeat 2 30 0 405 0 0 0 chr5 132468660 132468705 -70616827 + (TG)n Simple_repeat Simple_repeat 1 45 0 575 306 88 33 chr5 132469317 132469552 -70615980 - MIR SINE MIR 0 262 25 28 29 0 0 chr5 132469827 132469862 -70615670 + AT_rich Low_complexity Low_complexity 1 35 0 978 203 0 0 chr5 132469871 132470029 -70615503 - FAM SINE Alu -17 158 1 312 274 22 30 chr5 132470322 132470457 -70615075 - L1ME3A LINE L1 0 6170 6037 2301 231 40 76 chr5 132470632 132471559 -70613973 - L1MC5 LINE L1 -441 7520 6651 267 31 0 0 chr5 132471559 132471591 -70613941 + (CA)n Simple_repeat Simple_repeat 2 33 0 2301 231 40 76 chr5 132471591 132471760 -70613772 - L1MC5 LINE L1 -1310 6651 6478 236 272 0 0 chr5 132472179 132472268 -70613264 - L1M1 LINE L1 -4682 1700 1556 735 146 8 31 chr5 132473635 132473765 -70611767 + FLAM_A SINE Alu 1 127 -6 180 0 0 0 chr5 132474149 132474169 -70611363 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 512 231 64 26 chr5 132474308 132474464 -70611068 - MIR SINE MIR -15 247 86 2037 126 0 0 chr5 132474701 132474979 -70610553 + AluSx SINE Alu 20 297 -15 199 313 62 39 chr5 132475465 132475593 -70609939 + MIR3 SINE MIR 77 207 -1 465 247 89 42 chr5 132476011 132476201 -70609331 + L1MC4a LINE L1 5696 5894 -1914 2248 85 0 3 chr5 132476628 132476922 -70608610 + AluY SINE Alu 6 298 -13 196 213 43 0 chr5 132477011 132477058 -70608474 - L2 LINE L2 -32 3240 3192 186 267 131 63 chr5 132477219 132477440 -70608092 + L2 LINE L2 2848 3083 -189 180 0 0 0 chr5 132477564 132477584 -70607948 + (T)n Simple_repeat Simple_repeat 1 20 0 2033 130 72 23 chr5 132477590 132477937 -70607595 - L1MA9 LINE L1 0 6312 5949 2149 243 38 19 chr5 132480442 132480968 -70604564 - MLT1F LTR MaLR 0 542 7 371 216 196 69 chr5 132481073 132481318 -70604214 - L2 LINE L2 -338 2976 2701 204 236 55 87 chr5 132481440 132481567 -70603965 + L2 LINE L2 3146 3268 -45 23 0 0 0 chr5 132481778 132481801 -70603731 + AT_rich Low_complexity Low_complexity 1 23 0 329 280 37 89 chr5 132482230 132482444 -70603088 + HAL1 LINE L1 156 358 -2149 291 269 41 55 chr5 132482447 132482592 -70602940 + HAL1 LINE L1 1785 1927 -580 238 301 32 21 chr5 132482625 132482718 -70602814 + MIR SINE MIR 48 141 -121 1727 222 63 5 chr5 132482773 132482929 -70602603 + L1MB7 LINE L1 5621 5767 -417 369 0 0 0 chr5 132482929 132482970 -70602562 + (TA)n Simple_repeat Simple_repeat 1 41 0 1727 222 63 5 chr5 132482970 132483227 -70602305 + L1MB7 LINE L1 5767 6058 -126 449 125 57 23 chr5 132483248 132483336 -70602196 - L1MA9 LINE L1 -404 5908 5818 493 149 154 27 chr5 132483339 132483351 -70602181 + L1MB8 LINE L1 6031 6040 -138 2924 148 33 15 chr5 132483351 132483872 -70601660 - L1MA8 LINE L1 -1 6290 5761 493 149 154 27 chr5 132483872 132483989 -70601543 + L1MB8 LINE L1 6040 6171 -7 335 252 82 15 chr5 132484010 132484145 -70601387 + L1MC5 LINE L1 7782 7925 -36 44050 36 7 16 chr5 132484328 132490537 -70594995 - L1PA3 LINE L1 0 6155 1 379 276 178 23 chr5 132490822 132491036 -70594496 - MIR SINE MIR 0 262 16 224 348 127 35 chr5 132491491 132491916 -70593616 + L2 LINE L2 2804 3267 -5 195 295 16 33 chr5 132493558 132493619 -70591913 + MIR SINE MIR 19 78 -130 216 353 59 0 chr5 132494268 132494353 -70591179 + L2 LINE L2 2654 2743 -571 943 147 0 0 chr5 132494394 132494537 -70590995 - FRAM SINE Alu -15 161 19 1024 159 19 0 chr5 132495719 132495876 -70589656 + FAM SINE Alu 2 161 -14 238 196 0 22 chr5 132496497 132496580 -70588952 + CT-rich Low_complexity Low_complexity 2 84 -7 2037 142 29 0 chr5 132496580 132496891 -70588641 - 7SLRNA srpRNA srpRNA 0 320 1 21 71 0 0 chr5 132496901 132496943 -70588589 + AT_rich Low_complexity Low_complexity 1 42 0 387 217 48 0 chr5 132497255 132497338 -70588194 - HsTC2 DNA Tc2 -1811 87 1 491 281 77 10 chr5 132497478 132497674 -70587858 - L1MC/D LINE L1 -2008 5800 5592 305 239 123 49 chr5 132497841 132498004 -70587528 + MER104 DNA Tc2 2 176 -4 186 167 0 111 chr5 132498292 132498346 -70587186 - MIR3 SINE MIR -38 170 123 24 32 0 0 chr5 132498397 132498428 -70587104 + AT_rich Low_complexity Low_complexity 1 31 0 1989 124 31 0 chr5 132498843 132499134 -70586398 + AluSg SINE Alu 1 300 -10 309 326 84 33 chr5 132500087 132500302 -70585230 + MIR SINE MIR 25 250 -12 1943 123 30 0 chr5 132500812 132501081 -70584451 + AluSx SINE Alu 1 277 -35 252 0 0 0 chr5 132501083 132501111 -70584421 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1800 179 0 3 chr5 132501270 132501583 -70583949 - AluJo SINE Alu 0 312 1 2367 84 10 3 chr5 132501669 132501967 -70583565 + AluSc SINE Alu 1 300 -9 302 270 95 80 chr5 132502152 132502352 -70583180 + L1MC4a LINE L1 5733 5935 -1873 372 223 218 20 chr5 132502459 132502656 -70582876 + MIR SINE MIR 4 239 -23 812 134 0 40 chr5 132502864 132503013 -70582519 + FLAM_C SINE Alu 1 143 0 230 286 48 36 chr5 132504104 132504188 -70581344 - L2 LINE L2 0 3313 3229 643 186 0 53 chr5 132504283 132504436 -70581096 + FLAM_A SINE Alu 12 158 0 361 264 11 0 chr5 132504444 132504535 -70580997 + L2 LINE L2 3222 3313 0 520 313 91 12 chr5 132504879 132505122 -70580410 + MIR SINE MIR 1 262 0 1014 128 0 0 chr5 132505140 132505281 -70580251 - AluSg/x SINE Alu -45 267 127 209 0 97 0 chr5 132505293 132505324 -70580208 + T-rich Low_complexity Low_complexity 2 35 0 1956 131 0 7 chr5 132505326 132505609 -70579923 - AluY SINE Alu -30 281 1 1983 151 7 3 chr5 132506385 132506684 -70578848 - AluJo SINE Alu -12 300 1 944 167 65 6 chr5 132506828 132506996 -70578536 + MER5B DNA MER1_type 1 178 0 997 195 54 19 chr5 132507006 132507211 -70578321 + MER20 DNA MER1_type 4 215 -4 22 0 0 0 chr5 132507516 132507538 -70577994 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr5 132507808 132507839 -70577693 + AT_rich Low_complexity Low_complexity 1 31 0 2052 106 11 3 chr5 132507839 132508122 -70577410 - AluSx SINE Alu -27 285 1 23 0 0 0 chr5 132508295 132508318 -70577214 + AT_rich Low_complexity Low_complexity 1 23 0 1636 168 3 46 chr5 132508517 132508821 -70576711 - AluJb SINE Alu -21 291 1 190 172 0 35 chr5 132508901 132508959 -70576573 + CT-rich Low_complexity Low_complexity 2 57 0 884 253 0 0 chr5 132509351 132509525 -70576007 + FRAM SINE Alu 1 171 -5 552 271 110 47 chr5 132510042 132510407 -70575125 + L3 LINE CR1 1187 1574 -3 670 243 129 139 chr5 132510502 132511161 -70574371 + L2 LINE L2 1570 2234 -1079 2205 90 0 3 chr5 132511161 132511451 -70574081 + AluY SINE Alu 1 289 -22 670 243 129 139 chr5 132511451 132512556 -70572976 + L2 LINE L2 2234 3312 -1 884 323 153 20 chr5 132512853 132513550 -70571982 + L2 LINE L2 2032 2821 -493 252 186 143 14 chr5 132513642 132513712 -70571820 + L2 LINE L2 3189 3267 -5 1522 117 0 0 chr5 132514317 132514531 -70571001 + AluSg/x SINE Alu 99 312 0 907 161 0 0 chr5 132515179 132515322 -70570210 + FLAM_C SINE Alu 1 143 0 532 255 110 28 chr5 132515322 132515577 -70569955 - L1ME LINE L1 -310 5811 5536 292 286 126 80 chr5 132515585 132515651 -70569881 + L2 LINE L2 2778 2840 -473 2333 63 0 3 chr5 132515651 132515975 -70569557 - AluY SINE Alu 0 323 1 292 286 126 80 chr5 132515975 132516396 -70569136 + L2 LINE L2 2840 3312 -1 181 274 59 49 chr5 132516580 132516682 -70568850 - L2 LINE L2 -246 3026 2924 2395 89 0 0 chr5 132517675 132517979 -70567553 - AluSx SINE Alu -8 304 1 622 243 47 7 chr5 132517987 132518135 -70567397 - MIR SINE MIR -75 187 34 409 100 0 0 chr5 132518482 132518532 -70567000 - Alu SINE Alu -258 51 2 230 306 69 49 chr5 132519308 132519452 -70566080 + MIR3 SINE MIR 59 205 -3 212 301 48 0 chr5 132519870 132519953 -70565579 + MIR SINE MIR 104 190 -72 411 318 91 14 chr5 132522444 132522664 -70562868 - MIR SINE MIR 0 262 26 210 170 64 0 chr5 132523035 132523082 -70562450 + (TATG)n Simple_repeat Simple_repeat 1 50 0 306 0 0 0 chr5 132524845 132524879 -70560653 + (TG)n Simple_repeat Simple_repeat 2 35 0 919 92 0 8 chr5 132524880 132525000 -70560532 + AluSc SINE Alu 169 287 -22 1074 235 117 55 chr5 132525875 132526418 -70559114 - L2 LINE L2 -4 3309 2743 308 284 121 0 chr5 132526417 132526558 -70558974 - MIR3 SINE MIR -48 160 3 * 22 0 0 0 chr5 132527811 132527833 -70557699 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr5 132528384 132528434 -70557098 + (CA)n Simple_repeat Simple_repeat 2 51 0 1193 158 5 45 chr5 132529063 132529285 -70556247 + AluJo SINE Alu 85 297 -15 337 218 79 143 chr5 132529352 132529604 -70555928 - MLT1L LTR MaLR -243 372 137 207 0 0 0 chr5 132529680 132529703 -70555829 + (T)n Simple_repeat Simple_repeat 1 23 0 214 276 35 112 chr5 132530739 132530855 -70554677 + MIR3 SINE MIR 102 208 0 21 0 0 0 chr5 132531310 132531331 -70554201 + AT_rich Low_complexity Low_complexity 1 21 0 323 214 0 159 chr5 132531487 132531613 -70553919 - MER102b DNA MER1_type -4 337 232 2528 151 65 0 chr5 132534303 132534700 -70550832 - MSTB LTR MaLR 0 426 4 21 36 0 0 chr5 132535052 132535080 -70550452 + AT_rich Low_complexity Low_complexity 1 28 0 1042 189 87 28 chr5 132535197 132535449 -70550083 - MER119 DNA MER1_type 0 583 317 1130 221 81 105 chr5 132535449 132535523 -70550009 - LTR41 LTR ERVL -1 772 698 3390 136 60 24 chr5 132535523 132536119 -70549413 + L1MB3 LINE L1 5565 6182 -1 1130 221 81 105 chr5 132536119 132536760 -70548772 - LTR41 LTR ERVL -75 698 11 1299 277 23 3 chr5 132536762 132537072 -70548460 - MER119 DNA MER1_type -267 316 1 293 312 52 100 chr5 132538645 132538821 -70546711 + L3 LINE CR1 1355 1519 -58 2323 110 3 0 chr5 132538821 132539129 -70546403 + AluSq SINE Alu 1 309 -4 293 312 52 100 chr5 132539129 132539183 -70546349 + L3 LINE CR1 1519 1574 -3 424 254 31 31 chr5 132539538 132539668 -70545864 - MIR SINE MIR -41 221 92 280 262 28 47 chr5 132540146 132540288 -70545244 + MIR SINE MIR 20 152 -63 1192 214 75 22 chr5 132540369 132540691 -70544841 - MER2 DNA MER2_type -6 339 1 379 121 11 11 chr5 132541167 132541258 -70544274 + (TG)n Simple_repeat Simple_repeat 2 92 0 1591 179 7 18 chr5 132541270 132541549 -70543983 - AluJo SINE Alu -36 276 1 1816 130 58 10 chr5 132541571 132541864 -70543668 + MER47A DNA MER2_type 60 366 0 2268 123 0 0 chr5 132542000 132542310 -70543222 - AluSg SINE Alu 0 310 1 575 272 38 28 chr5 132544829 132545045 -70540487 - MIR SINE MIR -46 216 2 197 323 86 15 chr5 132549186 132549384 -70536148 + L2 LINE L2 1347 1558 -1756 * 342 301 177 63 chr5 132549370 132549749 -70535783 + L2 LINE L2 2851 3272 0 358 265 20 10 chr5 132550759 132550857 -70534675 - MIR3 SINE MIR -4 204 106 352 344 41 0 chr5 132552611 132552733 -70532799 + MIR SINE MIR 16 142 -66 1705 176 26 13 chr5 132552736 132553038 -70532494 + AluJo SINE Alu 1 306 -6 333 335 18 18 chr5 132553221 132553385 -70532147 - L2 LINE L2 -1136 2178 2015 1498 227 70 60 chr5 132553863 132554574 -70530958 - MER21B LTR ERV1 -54 809 19 1513 160 88 4 chr5 132554605 132554868 -70530664 - AluJo SINE Alu -25 287 3 471 209 11 22 chr5 132554873 132554964 -70530568 - MER21B LTR ERV1 -773 90 1 2483 87 0 0 chr5 132555064 132555374 -70530158 - AluSx SINE Alu -2 310 1 360 43 0 0 chr5 132558653 132558699 -70526833 + (TG)n Simple_repeat Simple_repeat 2 47 0 2275 125 0 0 chr5 132559264 132559576 -70525956 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 132560942 132560966 -70524566 + AT_rich Low_complexity Low_complexity 1 24 0 1468 154 46 56 chr5 132561966 132562078 -70523454 + AluJb SINE Alu 1 113 -199 2445 68 0 0 chr5 132562078 132562373 -70523159 + AluY SINE Alu 1 295 -16 1468 154 46 56 chr5 132562373 132562565 -70522967 + AluJb SINE Alu 113 302 -10 2227 110 0 3 chr5 132562900 132563208 -70522324 + AluSx SINE Alu 1 307 -5 735 237 40 96 chr5 132563906 132564359 -70521173 - MER113 DNA MER1_type? -3 518 90 1389 156 4 37 chr5 132564359 132564603 -70520929 - MER46A DNA MER2_type 0 236 1 735 237 40 96 chr5 132564603 132564618 -70520914 - MER113 DNA MER1_type? -431 90 76 321 241 8 68 chr5 132565012 132565145 -70520387 - Charlie8 DNA MER1_type -2247 170 46 687 142 0 71 chr5 132565145 132565286 -70520246 + L1MB7 LINE L1 6035 6165 -19 23 0 0 0 chr5 132565890 132565913 -70519619 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 132565943 132565968 -70519564 + AT_rich Low_complexity Low_complexity 1 25 0 2216 110 0 19 chr5 132566331 132566641 -70518891 - AluSx SINE Alu -7 305 2 559 244 70 66 chr5 132567074 132567343 -70518189 + L2 LINE L2 2995 3266 -1 1615 153 71 10 chr5 132567343 132567637 -70517895 + AluJo SINE Alu 1 312 0 779 287 61 0 chr5 132568116 132568377 -70517155 - MER102a DNA MER1_type -12 318 42 1768 161 38 7 chr5 132569013 132569305 -70516227 + AluJo SINE Alu 1 301 -11 216 306 89 48 chr5 132569619 132569743 -70515789 - L2 LINE L2 -191 3081 2953 204 111 0 0 chr5 132569797 132569833 -70515699 + (ATTTG)n Simple_repeat Simple_repeat 5 40 0 1682 181 4 7 chr5 132569833 132570114 -70515418 - AluSx SINE Alu -32 280 1 269 264 83 0 chr5 132572542 132572614 -70512918 + MIR SINE MIR 59 136 -72 252 350 21 10 chr5 132573505 132573602 -70511930 - MER5B DNA MER1_type -5 173 76 1709 159 19 19 chr5 132573726 132574034 -70511498 + AluJb SINE Alu 1 308 -4 1579 70 50 0 chr5 132574208 132574407 -70511125 + AluSc SINE Alu 89 297 -12 213 39 0 0 chr5 132575019 132575045 -70510487 + (TAA)n Simple_repeat Simple_repeat 3 28 0 671 231 169 10 chr5 132575066 132575261 -70510271 - MIR SINE MIR -26 236 11 503 237 33 7 chr5 132575408 132575560 -70509972 + MER103 DNA DNA 4 159 -7 409 193 193 18 chr5 132575736 132575850 -70509682 - MER94 DNA DNA 0 134 1 624 249 90 6 chr5 132576490 132576667 -70508865 + MIR SINE MIR 5 196 -66 2169 117 7 0 chr5 132576670 132576970 -70508562 + AluSx SINE Alu 1 302 -10 21 36 0 0 chr5 132578098 132578126 -70507406 + AT_rich Low_complexity Low_complexity 1 28 0 230 288 39 5 chr5 132578333 132578449 -70507083 - MIR SINE MIR -32 230 114 621 207 66 23 chr5 132578639 132578967 -70506565 - LTR37A LTR ERV1 0 426 25 243 0 0 0 chr5 132578983 132579010 -70506522 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 289 143 16 16 chr5 132579426 132579489 -70506043 + CT-rich Low_complexity Low_complexity 3 65 0 341 261 37 52 chr5 132580902 132581036 -70504496 - L2 LINE L2 -23 3290 3159 1644 125 49 66 chr5 132581090 132581410 -70504122 - AluJo SINE Alu 0 315 1 1064 289 44 42 chr5 132581455 132581998 -70503534 - L2 LINE L2 -711 2603 2060 1706 157 0 49 chr5 132583294 132583599 -70501933 - AluJb SINE Alu -22 290 1 2373 90 3 0 chr5 132583943 132584244 -70501288 + AluSq SINE Alu 1 302 -11 1701 124 147 0 chr5 132584851 132585117 -70500415 - AluSx SINE Alu -7 305 1 2158 117 21 0 chr5 132587077 132587367 -70498165 - AluSx SINE Alu -11 301 6 335 226 226 9 chr5 132588486 132588601 -70496931 - MIR SINE MIR -65 197 58 2206 112 0 3 chr5 132589180 132589483 -70496049 + AluSq SINE Alu 5 306 -7 243 0 0 0 chr5 132589592 132589619 -70495913 + (CA)n Simple_repeat Simple_repeat 2 28 0 2233 120 3 0 chr5 132590864 132591163 -70494369 + AluSq SINE Alu 1 300 -13 22 0 0 0 chr5 132591176 132591198 -70494334 + AT_rich Low_complexity Low_complexity 1 22 0 684 281 171 6 chr5 132592171 132592527 -70493005 - MLT1H LTR MaLR -1 548 134 3199 160 31 15 chr5 132592534 132593123 -70492409 - MER77 LTR ERV1 -7 598 1 312 245 20 29 chr5 132593123 132593221 -70492311 - MLT1H LTR MaLR -445 97 1 199 333 28 0 chr5 132593407 132593479 -70492053 - L2 LINE L2 -8 3305 3232 1739 150 20 33 chr5 132593823 132594129 -70491403 + AluJb SINE Alu 3 304 -8 947 173 48 12 chr5 132594241 132594409 -70491123 - AluJb SINE Alu -10 302 129 422 207 96 0 chr5 132595794 132595949 -70489583 - L1MD2 LINE L1 -29 7966 6198 2588 170 79 4 chr5 132595949 132596468 -70489064 - L1MD2 LINE L1 -429 5930 5373 251 172 0 17 chr5 132596553 132596611 -70488921 + CT-rich Low_complexity Low_complexity 3 59 0 718 166 203 42 chr5 132596631 132596872 -70488660 - L1ME3 LINE L1 -33 6129 5850 2235 130 0 0 chr5 132597172 132597480 -70488052 - AluSx SINE Alu 0 312 5 315 245 111 15 chr5 132598072 132598226 -70487306 - MIR SINE MIR -42 166 2 367 263 188 38 chr5 132598512 132598672 -70486860 + MIR SINE MIR 69 252 -10 2236 101 3 3 chr5 132599815 132600113 -70485419 + AluSx SINE Alu 5 302 -10 940 303 64 28 chr5 132600126 132600595 -70484937 + MLT1K LTR MaLR 69 554 -34 2333 87 0 7 chr5 132600651 132600951 -70484581 - AluSc SINE Alu -11 298 1 402 204 160 7 chr5 132601205 132601358 -70484174 + MIR SINE MIR 64 249 -13 469 283 164 5 chr5 132601751 132601970 -70483562 - MIR SINE MIR -7 255 2 498 281 121 4 chr5 132602876 132603107 -70482425 + MLT1K LTR MaLR 16 273 -315 582 254 39 2 chr5 132605524 132605695 -70479837 + MLT1F1 LTR MaLR 4 179 -388 329 111 200 11 chr5 132605695 132605785 -70479747 + L1MC/D LINE L1 5722 5828 -505 292 328 44 0 chr5 132605799 132605982 -70479550 + L1M4 LINE L1 2716 2906 -3240 4437 47 35 6 chr5 132606011 132607008 -70478524 + MER11A LTR ERVK 1 1266 0 2101 83 0 21 chr5 132607008 132607297 -70478235 + L1PA6 LINE L1 5872 6154 0 2606 128 28 53 chr5 132607503 132608010 -70477522 + L1MC1 LINE L1 5835 6328 -5 877 255 95 41 chr5 132608040 132608409 -70477123 + MLT1F1 LTR MaLR 179 567 0 193 231 0 0 chr5 132608601 132608640 -70476892 - MIR SINE MIR -6 256 218 2494 91 0 0 chr5 132609053 132609361 -70476171 + AluY SINE Alu 1 308 -3 909 291 34 13 chr5 132609552 132610019 -70475513 + L1M4 LINE L1 2461 2937 -3209 261 322 159 53 chr5 132610031 132610559 -70474973 - L2 LINE L2 -2201 1113 530 391 335 81 3 chr5 132611208 132611521 -70474011 + L2 LINE L2 2705 3085 -228 484 277 127 0 chr5 132611579 132611745 -70473787 + MIR SINE MIR 50 236 -26 523 225 123 59 chr5 132611764 132611911 -70473621 + L2 LINE L2 3115 3251 -62 2499 117 6 6 chr5 132611911 132612271 -70473261 + THE1B LTR MaLR 1 360 -4 10483 104 45 8 chr5 132612275 132613740 -70471792 + THE1B-int LTR MaLR 1 1527 -53 1963 166 0 0 chr5 132613740 132614036 -70471496 - AluSx SINE Alu -16 296 1 10483 104 45 8 chr5 132614036 132614093 -70471439 + THE1B-int LTR MaLR 1527 1580 0 2588 110 6 6 chr5 132614093 132614457 -70471075 + THE1B LTR MaLR 1 364 0 523 225 123 59 chr5 132614457 132614490 -70471042 + L2 LINE L2 3252 3313 0 1737 100 0 4 chr5 132614601 132614873 -70470659 - L1PA8 LINE L1 0 6172 5905 2123 99 17 7 chr5 132615327 132615621 -70469911 - AluY SINE Alu -14 297 1 2042 238 13 29 chr5 132617595 132618120 -70467412 - LTR40a LTR ERVL 0 519 3 476 254 115 38 chr5 132618608 132618896 -70466636 + L1MEc LINE L1 771 1080 -5316 3288 222 64 90 chr5 132618902 132620060 -70465472 - L1ME1 LINE L1 -186 5980 4794 2335 93 0 6 chr5 132620060 132620371 -70465161 - AluY SINE Alu -2 309 1 3288 222 64 90 chr5 132620371 132620884 -70464648 - L1ME1 LINE L1 -1372 4794 4270 2488 75 0 0 chr5 132620884 132621192 -70464340 + AluY SINE Alu 1 308 -3 207 0 0 0 chr5 132621192 132621215 -70464317 + (TA)n Simple_repeat Simple_repeat 1 23 0 3288 222 64 90 chr5 132621215 132622126 -70463406 - L1ME1 LINE L1 -1894 4272 3469 576 247 41 14 chr5 132622130 132622276 -70463256 + MLT1E1 LTR MaLR 1 150 -504 6579 24 0 0 chr5 132622331 132623093 -70462439 + L1PA4 LINE L1 5390 6151 -4 348 302 38 3 chr5 132623146 132623279 -70462253 + MLT1E2 LTR MaLR 214 396 -230 1881 326 53 22 chr5 132623467 132623822 -70461710 - L2 LINE L2 -424 2890 2548 3574 97 55 26 chr5 132623822 132624390 -70461142 - L1PB1 LINE L1 -3 6148 5565 1881 326 53 22 chr5 132624390 132624958 -70460574 - L2 LINE L2 -766 2548 1938 564 345 78 7 chr5 132625652 132625945 -70459587 - L2 LINE L2 -2338 976 663 339 230 0 0 chr5 132626506 132626593 -70458939 + GA-rich Low_complexity Low_complexity 4 90 0 2422 81 0 3 chr5 132627729 132628037 -70457495 + AluY SINE Alu 1 307 -4 277 294 101 0 chr5 132628655 132628774 -70456758 + L2 LINE L2 3183 3313 0 259 320 13 0 chr5 132629109 132629184 -70456348 + L2 LINE L2 3227 3302 -11 1001 307 57 79 chr5 132629304 132629410 -70456122 + HAL1 LINE L1 1 108 -2399 2210 123 0 0 chr5 132629410 132629719 -70455813 + AluSg SINE Alu 1 309 -1 1001 307 57 79 chr5 132629719 132630380 -70455152 + HAL1 LINE L1 108 751 -1756 331 232 67 98 chr5 132630402 132630566 -70454966 + HAL1 LINE L1 2169 2327 -180 324 146 0 0 chr5 132630566 132630621 -70454911 - MLT2B1 LTR ERVL 0 520 466 1339 193 29 61 chr5 132630665 132631055 -70454477 - MLT2B1 LTR ERVL -43 371 1 6375 89 21 53 chr5 132631531 132632589 -70452943 + L1MA3 LINE L1 5282 6305 0 24 32 0 0 chr5 132632629 132632660 -70452872 + AT_rich Low_complexity Low_complexity 1 31 0 2090 141 0 0 chr5 132632666 132632963 -70452569 + AluSg SINE Alu 3 299 -11 248 270 161 44 chr5 132633058 132633195 -70452337 - MIR SINE MIR 0 262 110 793 179 138 31 chr5 132633207 132633403 -70452129 + MER20 DNA MER1_type 1 217 -2 439 300 77 53 chr5 132634048 132634501 -70451031 + L1MEc LINE L1 57 520 -5876 344 41 93 21 chr5 132634611 132634708 -70450824 + (TAGA)n Simple_repeat Simple_repeat 4 107 0 2465 245 43 30 chr5 132634708 132635523 -70450009 + L1ME2 LINE L1 5350 6334 0 1265 204 145 54 chr5 132635693 132636321 -70449211 + L1MC5 LINE L1 7246 7930 -31 375 218 139 0 chr5 132636442 132636543 -70448989 - MLT1I LTR MaLR -2 407 293 257 223 173 9 chr5 132637531 132637688 -70447844 + Charlie8 DNA MER1_type 29 203 -2214 2481 74 0 3 chr5 132637854 132638164 -70447368 + AluY SINE Alu 3 311 0 333 0 0 0 chr5 132639272 132639309 -70446223 + (TA)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr5 132641044 132641066 -70444466 + AT_rich Low_complexity Low_complexity 1 22 0 235 344 32 0 chr5 132642999 132643124 -70442408 + L1ME LINE L1 566 694 -5940 493 278 59 25 chr5 132643708 132644134 -70441398 + L1ME LINE L1 1286 1882 -4832 21 0 0 0 chr5 132644139 132644160 -70441372 + AT_rich Low_complexity Low_complexity 1 21 0 323 293 198 19 chr5 132644822 132644979 -70440553 + MIR3 SINE MIR 20 204 -4 29 0 0 0 chr5 132646362 132646391 -70439141 + AT_rich Low_complexity Low_complexity 1 29 0 3440 81 4 7 chr5 132647037 132647495 -70438037 + L1PA10 LINE L1 5656 6112 -56 457 202 12 0 chr5 132647691 132647775 -70437757 - LTR40b LTR ERVL 0 462 378 186 43 0 0 chr5 132647830 132647853 -70437679 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 195 292 0 0 chr5 132648025 132648073 -70437459 - MIR SINE MIR -31 231 184 249 218 0 0 chr5 132648290 132648368 -70437164 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 275 246 169 34 chr5 132649140 132649258 -70436274 - L2 LINE L2 -3 3310 3177 867 209 0 0 chr5 132650681 132650839 -70434693 + FRAM SINE Alu 1 158 -18 249 313 137 60 chr5 132651745 132651816 -70433716 - L2 LINE L2 -1 3312 3248 2426 60 0 7 chr5 132651816 132652116 -70433416 + AluY SINE Alu 2 299 -12 249 313 137 60 chr5 132652116 132652395 -70433137 - L2 LINE L2 -65 3248 2935 664 328 62 69 chr5 132652458 132653287 -70432245 - L2 LINE L2 -687 2627 1805 689 264 36 16 chr5 132653547 132653797 -70431735 + MER113 DNA MER1_type? 9 263 -258 440 330 95 11 chr5 132654152 132654331 -70431201 - L2 LINE L2 -4 3268 3075 271 269 176 16 chr5 132654620 132654747 -70430785 + MIR3 SINE MIR 10 155 -64 28 29 0 0 chr5 132654827 132654862 -70430670 + AT_rich Low_complexity Low_complexity 1 35 0 2264 92 7 16 chr5 132655861 132656166 -70429366 + AluSc SINE Alu 1 302 -7 430 258 86 37 chr5 132656386 132656630 -70428902 + HAL1 LINE L1 1274 1529 -978 3205 164 53 17 chr5 132656759 132657453 -70428079 + L1MCa LINE L1 767 1485 -4941 265 254 63 35 chr5 132657732 132657874 -70427658 + HAL1b LINE L1 746 891 -457 1716 160 33 27 chr5 132657903 132658203 -70427329 + AluJo SINE Alu 1 302 -10 356 330 36 67 chr5 132658275 132658605 -70426927 + HAL1 LINE L1 2188 2507 0 21 0 0 0 chr5 132658628 132658649 -70426883 + AT_rich Low_complexity Low_complexity 1 21 0 249 395 25 0 chr5 132659192 132659311 -70426221 + MIR SINE MIR 16 137 -71 18854 160 61 22 chr5 132660151 132663262 -70422270 + L1MA1 LINE L1 24 3015 -4706 2289 76 10 3 chr5 132663262 132663563 -70421969 + AluY SINE Alu 1 303 -8 18854 160 61 22 chr5 132663563 132666491 -70419041 + L1MA1 LINE L1 3015 5830 -1891 2086 129 3 0 chr5 132666491 132666778 -70418754 + AluSx SINE Alu 1 288 -24 186 43 0 0 chr5 132666788 132666811 -70418721 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 18854 160 61 22 chr5 132666811 132667258 -70418274 + L1MA1 LINE L1 5838 6266 -1455 1873 142 137 13 chr5 132667258 132667639 -70417893 - MSTA LTR MaLR 0 428 1 18854 160 61 22 chr5 132667639 132668529 -70417003 + L1MA1 LINE L1 6266 7714 -7 278 264 0 23 chr5 132668602 132668689 -70416843 - MLT1I LTR MaLR 0 409 325 695 366 75 20 chr5 132670492 132671006 -70414526 + L2 LINE L2 2771 3313 0 21 0 0 0 chr5 132671394 132671415 -70414117 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 132671505 132671528 -70414004 + AT_rich Low_complexity Low_complexity 1 23 0 1937 142 50 29 chr5 132671572 132672147 -70413385 - LTR8 LTR ERV1 -14 677 1 22 0 0 0 chr5 132672620 132672642 -70412890 + AT_rich Low_complexity Low_complexity 1 22 0 382 283 112 58 chr5 132672653 132672876 -70412656 - L2 LINE L2 -777 2537 2303 1805 154 161 40 chr5 132673406 132673809 -70411723 + LTR47A LTR ERVL 1 452 0 4953 98 10 10 chr5 132674203 132674894 -70410638 + LTR8 LTR ERV1 1 691 0 180 0 0 0 chr5 132675449 132675469 -70410063 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 7167 53 1 2 chr5 132675481 132676849 -70408683 + L1PA5 LINE L1 4779 6151 -3 22 0 0 0 chr5 132678007 132678029 -70407503 + AT_rich Low_complexity Low_complexity 1 22 0 232 167 150 0 chr5 132678827 132678887 -70406645 + MIR SINE MIR 79 147 -115 3474 180 29 9 chr5 132678921 132679616 -70405916 + MER67C LTR ERV1 1 709 -1 586 318 87 12 chr5 132680084 132680326 -70405206 - MIR SINE MIR -1 261 2 483 317 42 28 chr5 132681029 132681313 -70404219 + L1MEd LINE L1 437 724 -5395 350 149 45 0 chr5 132681565 132681632 -70403900 + MER67C LTR ERV1 216 285 -425 2032 109 17 34 chr5 132681695 132681989 -70403543 + AluSg SINE Alu 1 289 -21 227 333 27 47 chr5 132682306 132682456 -70403076 - L2 LINE L2 -1023 2291 2145 211 139 0 23 chr5 132684417 132684460 -70401072 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1844 222 31 7 chr5 132684997 132685475 -70400057 - MER68 LTR ERV1 0 562 1 26 0 0 0 chr5 132686069 132686095 -70399437 + AT_rich Low_complexity Low_complexity 1 26 0 367 283 57 0 chr5 132686153 132686259 -70399273 - MIR SINE MIR -74 188 77 910 253 39 10 chr5 132686345 132686732 -70398800 - Charlie2 DNA MER1_type -25 2837 2440 1170 244 17 14 chr5 132686777 132687138 -70398394 - Charlie2 DNA MER1_type -645 2217 1856 558 264 14 114 chr5 132687129 132687489 -70398043 - Charlie2 DNA MER1_type -2452 330 7 * 321 323 62 23 chr5 132687556 132687686 -70397846 + L2 LINE L2 3136 3270 -2 579 62 0 0 chr5 132687813 132687893 -70397639 + (TA)n Simple_repeat Simple_repeat 1 80 0 40287 38 21 5 chr5 132689713 132693926 -70391606 + L1PA3 LINE L1 1 4349 -1806 2529 36 0 13 chr5 132693926 132694232 -70391300 - AluY SINE Alu -9 302 1 40287 38 21 5 chr5 132694232 132696070 -70389462 + L1PA3 LINE L1 4349 6155 0 24 0 0 0 chr5 132696200 132696224 -70389308 + AT_rich Low_complexity Low_complexity 1 24 0 368 349 74 56 chr5 132696427 132696911 -70388621 + HAL1 LINE L1 1113 1605 -902 19506 124 12 89 chr5 132697135 132701278 -70384254 - L1P LINE L1 -2315 3831 12 2918 226 55 24 chr5 132702678 132703681 -70381851 - L1ME2 LINE L1 0 6164 5135 353 295 200 10 chr5 132703705 132704010 -70381522 - L1ME4a LINE L1 -227 5894 5532 670 50 20 10 chr5 132704359 132704458 -70381074 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 295 262 28 19 chr5 132705002 132705109 -70380423 - MLT1L LTR MaLR -507 108 1 987 275 127 30 chr5 132705502 132705928 -70379604 + LTR33 LTR ERVL 54 520 -1 180 319 0 43 chr5 132706918 132706987 -70378545 + L2 LINE L2 3182 3247 -66 706 326 98 51 chr5 132707833 132708342 -70377190 + MLT1K LTR MaLR 33 565 -23 448 266 175 19 chr5 132711380 132711534 -70373998 + MER5B DNA MER1_type 1 178 0 1987 141 47 0 chr5 132711819 132712118 -70373414 + AluSq SINE Alu 1 313 0 237 305 106 20 chr5 132712231 132712382 -70373150 - MIR SINE MIR -25 237 74 1701 208 0 0 chr5 132713865 132714153 -70371379 - AluJb SINE Alu -20 292 5 361 95 0 16 chr5 132714468 132714531 -70371001 - L1PB1 LINE L1 0 6151 6090 5764 92 23 23 chr5 132714539 132715125 -70370407 - L1PB1 LINE L1 -3 6148 5546 3975 53 6 0 chr5 132715125 132715612 -70369920 - LTR2B LTR ERV1 0 490 1 5764 92 23 23 chr5 132715612 132716019 -70369513 - L1PB1 LINE L1 -604 5547 5141 5178 147 68 16 chr5 132716019 132717972 -70367560 - L1PBa LINE L1 -4660 2203 3 183 114 0 0 chr5 132718492 132718527 -70367005 + (TA)n Simple_repeat Simple_repeat 2 36 0 5922 77 0 30 chr5 132718545 132719349 -70366183 - LTR17 LTR ERV1 0 780 1 325 223 157 41 chr5 132719349 132719427 -70366105 - L2 LINE L2 -361 2953 2855 216 97 0 0 chr5 132719427 132719458 -70366074 + (GAGTG)n Simple_repeat Simple_repeat 4 34 0 325 223 157 41 chr5 132719458 132719500 -70366032 - L2 LINE L2 -459 2855 2819 1551 303 88 37 chr5 132720191 132720609 -70364923 - L2 LINE L2 -5 3308 2913 207 100 0 0 chr5 132720609 132720639 -70364893 + (GAGTG)n Simple_repeat Simple_repeat 1 30 0 1551 303 88 37 chr5 132720639 132721327 -70364205 - L2 LINE L2 -400 2913 2137 1625 186 20 119 chr5 132721828 132722231 -70363301 + MLT1F LTR MaLR 16 363 -179 2303 74 0 32 chr5 132722231 132722542 -70362990 + AluY SINE Alu 2 302 -9 1625 186 20 119 chr5 132722542 132722633 -70362899 + MLT1F LTR MaLR 363 461 -81 521 215 11 0 chr5 132722660 132722753 -70362779 - MER5B DNA MER1_type -32 146 53 1151 264 24 20 chr5 132723058 132723399 -70362133 + MER93a LTR ERV1 61 402 0 403 204 28 28 chr5 132723624 132723732 -70361800 - MLT1L LTR MaLR -7 608 501 198 103 0 0 chr5 132723918 132723947 -70361585 + (CA)n Simple_repeat Simple_repeat 2 30 0 573 269 41 20 chr5 132724474 132724671 -70360861 - MLT1H LTR MaLR -326 223 23 2467 48 0 0 chr5 132725264 132725559 -70359973 - AluY SINE Alu -16 295 1 218 317 0 29 chr5 132726109 132726213 -70359319 + GA-rich Low_complexity Low_complexity 5 105 0 697 144 15 0 chr5 132726461 132726593 -70358939 + CT-rich Low_complexity Low_complexity 2 135 0 948 178 183 0 chr5 132727603 132727800 -70357732 + Tigger3(Golem) DNA MER2_type 1 233 -2796 * 1338 94 64 13 chr5 132727797 132728030 -70357502 + Tigger3(Golem) DNA MER2_type 2464 2708 -321 2299 102 0 16 chr5 132729123 132729437 -70356095 - AluSq SINE Alu -4 309 1 384 161 9 116 chr5 132730081 132730193 -70355339 - MLT1J2 LTR MaLR -341 106 6 282 29 0 0 chr5 132730504 132730539 -70354993 + (CA)n Simple_repeat Simple_repeat 1 35 0 790 271 118 47 chr5 132730836 132731653 -70353879 + HAL1 LINE L1 4 1757 -750 275 329 117 12 chr5 132732167 132732407 -70353125 - MLT1K LTR MaLR -120 468 204 2154 125 10 0 chr5 132732707 132733002 -70352530 + AluSx SINE Alu 1 298 -14 234 0 0 0 chr5 132733963 132733989 -70351543 + (TA)n Simple_repeat Simple_repeat 2 27 0 38 22 0 0 chr5 132734050 132734095 -70351437 + AT_rich Low_complexity Low_complexity 1 45 0 357 250 52 87 chr5 132734366 132734538 -70350994 - L3 LINE CR1 -9 1568 1403 1298 210 32 40 chr5 132735403 132735621 -70349911 + L1MC4 LINE L1 6706 6921 -1121 231 103 0 0 chr5 132735621 132735660 -70349872 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1298 210 32 40 chr5 132735660 132735812 -70349720 + L1MC4 LINE L1 6921 7073 -969 2712 179 43 28 chr5 132735812 132736348 -70349184 - MLT2B3 LTR ERVL -10 544 1 377 228 29 37 chr5 132736352 132736488 -70349044 + L1MC4 LINE L1 7101 7235 -807 1913 249 73 25 chr5 132736530 132737216 -70348316 + L1MC4 LINE L1 7324 8042 0 254 338 12 0 chr5 132737370 132737450 -70348082 + MIR SINE MIR 69 149 -59 236 340 127 47 chr5 132737445 132737657 -70347875 + L3 LINE CR1 1347 1575 -2 * 21 89 0 0 chr5 132737708 132737764 -70347768 + AT_rich Low_complexity Low_complexity 1 56 0 686 149 16 0 chr5 132737987 132738108 -70347424 - MLT1K-int LTR MaLR -1245 126 4 421 97 28 0 chr5 132738165 132738237 -70347295 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 873 207 50 99 chr5 132738237 132738376 -70347156 - MLT2C1 LTR ERVL -59 338 194 243 0 0 0 chr5 132738376 132738403 -70347129 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 513 0 0 0 chr5 132738402 132738459 -70347073 + (TG)n Simple_repeat Simple_repeat 2 58 0 873 207 50 99 chr5 132738403 132738662 -70346870 - MLT2C1 LTR ERVL -203 194 13 28 0 0 0 chr5 132738714 132738742 -70346790 + AT_rich Low_complexity Low_complexity 1 28 0 285 319 127 32 chr5 132740497 132740867 -70344665 - MLT1K LTR MaLR -12 576 172 5558 161 41 22 chr5 132741102 132741268 -70344264 - L1MA5A LINE L1 -12 6285 6124 2143 157 53 17 chr5 132741268 132741681 -70343851 - MSTA LTR MaLR 0 428 1 5558 161 41 22 chr5 132741681 132741797 -70343735 - L1MA5A LINE L1 -173 6124 6012 1686 158 66 30 chr5 132741797 132742159 -70343373 - THE1C LTR MaLR 0 375 1 9284 137 16 36 chr5 132742159 132743769 -70341763 - THE1C-int LTR MaLR 0 1580 4 1388 186 66 41 chr5 132743772 132744138 -70341394 - THE1C LTR MaLR 0 375 1 5558 161 41 22 chr5 132744138 132744623 -70340909 - L1MA5A LINE L1 -286 6011 5537 2153 131 3 0 chr5 132744623 132744928 -70340604 - AluSx SINE Alu -2 310 5 5558 161 41 22 chr5 132744928 132745754 -70339778 - L1MA5A LINE L1 -760 5537 4628 1775 186 0 3 chr5 132745754 132746073 -70339459 - AluJb SINE Alu 0 318 1 5558 161 41 22 chr5 132746073 132746640 -70338892 - L1MA5A LINE L1 -1669 4628 4073 1407 220 9 28 chr5 132746684 132747002 -70338530 - AluJo SINE Alu 0 312 1 377 173 0 0 chr5 132747002 132747077 -70338455 - L1MA5A LINE L1 -2065 4081 4007 3594 62 0 9 chr5 132747146 132747613 -70337919 + L1PA8 LINE L1 5710 6172 0 849 289 104 8 chr5 132747924 132748326 -70337206 + LTR16A LTR ERVL 7 447 -3 344 295 79 26 chr5 132748326 132748650 -70336882 + MLT1L LTR MaLR 127 480 -115 22 0 0 0 chr5 132748714 132748736 -70336796 + AT_rich Low_complexity Low_complexity 1 22 0 1552 172 106 42 chr5 132749684 132749863 -70335669 - Tigger2a DNA MER2_type -2274 434 268 7376 40 12 0 chr5 132749863 132750946 -70334586 - L1PA5 LINE L1 -1 6153 5068 1552 172 106 42 chr5 132750946 132751173 -70334359 - Tigger2a DNA MER2_type -2440 268 2 607 293 62 48 chr5 132751599 132752019 -70333513 - LTR67 LTR ERVL -96 461 36 181 365 56 44 chr5 132752290 132752539 -70332993 - L2 LINE L2 -212 3060 2809 470 260 98 29 chr5 132753199 132753372 -70332160 + MIR SINE MIR 8 192 -70 212 31 62 0 chr5 132753771 132753803 -70331729 + T-rich Low_complexity Low_complexity 3 36 0 343 315 76 9 chr5 132754199 132754429 -70331103 - L1MC/D LINE L1 -509 5657 5472 820 381 84 14 chr5 132754478 132755358 -70330174 - L1MC/D LINE L1 -745 5401 4460 580 269 87 52 chr5 132755363 132755809 -70329723 + LTR37B LTR ERV1 7 468 0 299 295 48 24 chr5 132755851 132756058 -70329474 - L1MC/D LINE L1 -1727 4419 4208 206 271 0 17 chr5 132756230 132756289 -70329243 - MIR SINE MIR -52 210 153 297 0 0 0 chr5 132756934 132756967 -70328565 + (CA)n Simple_repeat Simple_repeat 2 34 0 887 240 77 10 chr5 132757080 132757288 -70328244 + MER58A DNA MER1_type 2 223 -1 332 337 60 16 chr5 132757429 132757681 -70327851 - L1ME LINE L1 -503 5618 5356 779 178 22 16 chr5 132758113 132758298 -70327234 + MER53 DNA DNA 4 189 0 464 273 120 0 chr5 132759062 132759212 -70326320 - MIR SINE MIR -74 188 21 252 277 119 0 chr5 132759344 132759445 -70326087 + MLT1L LTR MaLR 168 280 -335 245 325 155 16 chr5 132759749 132759943 -70325589 - MIR SINE MIR -6 256 36 21 57 0 0 chr5 132761198 132761233 -70324299 + AT_rich Low_complexity Low_complexity 1 35 0 5987 239 49 52 chr5 132761267 132763002 -70322530 + L1M2 LINE L1 1 1732 -5117 2241 108 0 0 chr5 132763002 132763298 -70322234 - AluY SINE Alu -15 296 1 5987 239 49 52 chr5 132763298 132763479 -70322053 + L1M2 LINE L1 1732 1912 -4937 13453 202 36 22 chr5 132763494 132765561 -70319971 + L1PB2 LINE L1 6 2042 -4825 4589 132 50 4 chr5 132765561 132766306 -70319226 - MER4E LTR ERV1 0 779 1 13453 202 36 22 chr5 132766306 132766676 -70318856 + L1PB2 LINE L1 2042 2405 -4462 1817 111 93 29 chr5 132766676 132766955 -70318577 + AluSp SINE Alu 1 297 -16 13453 202 36 22 chr5 132766955 132770750 -70314782 + L1PB2 LINE L1 2405 6469 -398 504 0 0 0 chr5 132770750 132770806 -70314726 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 13453 202 36 22 chr5 132770806 132771200 -70314332 + L1PB2 LINE L1 6469 6856 -11 11485 221 37 16 chr5 132771215 132775172 -70310360 + L1M2 LINE L1 1882 5924 -924 1638 176 44 16 chr5 132775175 132775538 -70309994 - LTR52 LTR ERVL -48 373 1 1626 139 51 53 chr5 132775776 132776151 -70309381 + THE1C LTR MaLR 2 375 0 400 351 89 5 chr5 132776427 132776629 -70308903 - MIR SINE MIR 0 262 44 214 295 74 42 chr5 132777770 132777865 -70307667 - MIR SINE MIR -75 133 36 1797 112 133 24 chr5 132777873 132778211 -70307321 + THE1C LTR MaLR 1 375 0 9013 126 39 8 chr5 132778211 132779677 -70305855 + THE1C-int LTR MaLR 1 1511 -69 * 29893 30 13 1 chr5 132779676 132785707 -70299825 + L1HS LINE L1 2 6155 0 28 0 0 0 chr5 132785707 132785735 -70299797 + AT_rich Low_complexity Low_complexity 1 28 0 435 122 0 12 chr5 132785735 132785817 -70299715 + THE1C-int LTR MaLR 1500 1580 0 2136 117 61 19 chr5 132785817 132786176 -70299356 + THE1C LTR MaLR 1 374 -1 813 204 29 132 chr5 132786308 132786588 -70298944 - MIR SINE MIR 0 262 12 1470 199 50 14 chr5 132786596 132786877 -70298655 + AluJo SINE Alu 4 294 -18 222 273 34 68 chr5 132786906 132786994 -70298538 + MIR SINE MIR 159 243 -19 207 0 0 0 chr5 132788298 132788321 -70297211 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 618 271 164 10 chr5 132788805 132789012 -70296520 + MIR SINE MIR 5 243 -19 789 219 0 0 chr5 132792965 132793175 -70292357 + L1MB3 LINE L1 2594 2803 -4046 3584 208 53 8 chr5 132793187 132794145 -70291387 + L1MB3 LINE L1 2926 3926 -2922 337 325 5 21 chr5 132794237 132794431 -70291101 - L1MC4a LINE L1 -1834 5974 5784 2139 202 30 6 chr5 132794458 132794998 -70290534 + L1MB3 LINE L1 3899 4451 -2397 4643 43 0 0 chr5 132794998 132795553 -70289979 + L1PA5 LINE L1 5588 6146 -8 3565 192 32 20 chr5 132795558 132796935 -70288597 + L1MB3 LINE L1 5062 6465 -408 2401 82 0 3 chr5 132796935 132797238 -70288294 + AluY SINE Alu 1 302 -9 3565 192 32 20 chr5 132797238 132797282 -70288250 + L1MB3 LINE L1 6465 6507 -366 5076 127 29 7 chr5 132797296 132798170 -70287362 - L1PA16 LINE L1 -9 6157 5265 2990 183 49 2 chr5 132798171 132798804 -70286728 - MSTA-int LTR MaLR -988 663 1 2492 145 39 0 chr5 132798853 132799261 -70286271 - MSTA LTR MaLR 0 428 5 5251 238 60 32 chr5 132799312 132801092 -70284440 - L1P LINE L1 -2451 3695 1854 12224 28 5 0 chr5 132801092 132803321 -70282211 + L1PA3 LINE L1 3920 6155 0 5251 238 60 32 chr5 132803321 132803521 -70282011 - L1P LINE L1 -4292 1854 1661 349 205 17 17 chr5 132803506 132803617 -70281915 + L1MB3 LINE L1 6477 6587 -277 * 1527 217 60 0 chr5 132803627 132803991 -70281541 + LTR32 LTR ERVL 18 403 -68 230 146 42 42 chr5 132804051 132804099 -70281433 + MIR3 SINE MIR 151 198 -10 31 0 0 0 chr5 132804639 132804670 -70280862 + AT_rich Low_complexity Low_complexity 1 31 0 1036 65 78 0 chr5 132804673 132804827 -70280705 + MER51B LTR ERV1 212 377 0 4219 150 39 5 chr5 132804882 132805671 -70279861 + MER51-int LTR ERV1 691 1506 -6310 233 204 0 0 chr5 132805680 132805724 -70279808 + MER4A LTR ERV1 55 98 -566 654 189 55 61 chr5 132805766 132805930 -70279602 + MER4A LTR ERV1 372 534 -130 2562 77 29 18 chr5 132805930 132806372 -70279160 + MER51-int LTR ERV1 1806 2252 -5564 212 250 39 0 chr5 132806388 132806440 -70279092 + L3 LINE CR1 656 709 -868 2712 52 0 0 chr5 132806812 132807176 -70278356 + L1PA3 LINE L1 5811 6174 0 296 250 28 0 chr5 132807188 132807296 -70278236 + L1MB3 LINE L1 5117 5227 -919 570 274 0 14 chr5 132807320 132807466 -70278066 + FRAM SINE Alu 17 160 -16 193 57 57 0 chr5 132807466 132807501 -70278031 + (TA)n Simple_repeat Simple_repeat 1 37 0 4647 162 14 22 chr5 132807519 132808471 -70277061 + L1MB3 LINE L1 5236 6180 -3 576 279 62 19 chr5 132810561 132810769 -70274763 + MIR SINE MIR 28 244 -18 3613 83 14 2 chr5 132812371 132812864 -70272668 + L1PA10 LINE L1 5655 6153 -15 26 0 0 0 chr5 132814210 132814236 -70271296 + AT_rich Low_complexity Low_complexity 1 26 0 1956 151 3 17 chr5 132814370 132814668 -70270864 + AluSx SINE Alu 1 294 -18 1797 157 58 25 chr5 132816590 132816953 -70268579 - THE1C LTR MaLR 0 375 1 628 338 65 22 chr5 132817789 132818189 -70267343 - LTR16C LTR ERVL -39 452 36 553 258 90 18 chr5 132818354 132818521 -70267011 - MIR SINE MIR -12 250 72 2332 108 0 9 chr5 132818800 132819115 -70266417 - AluSx SINE Alu 0 312 1 216 158 0 0 chr5 132820062 132820100 -70265432 + (CA)n Simple_repeat Simple_repeat 1 38 0 342 0 0 0 chr5 132820431 132820469 -70265063 + (CA)n Simple_repeat Simple_repeat 1 38 0 2208 106 111 18 chr5 132821080 132821529 -70264003 + LTR14B LTR ERVK 1 608 0 2392 114 0 0 chr5 132821558 132821865 -70263667 - AluSg SINE Alu -3 307 1 502 297 88 119 chr5 132822266 132822721 -70262811 + L2 LINE L2 2830 3270 -2 734 210 16 5 chr5 132823872 132824058 -70261474 + MER53 DNA DNA 2 189 0 338 210 0 219 chr5 132825036 132825255 -70260277 + MIR SINE MIR 90 260 -2 290 230 70 40 chr5 132826494 132826594 -70258938 + MIR SINE MIR 145 247 -15 307 282 78 46 chr5 132827907 132828191 -70257341 + L1ME4a LINE L1 5731 6023 -98 245 302 13 31 chr5 132828291 132828516 -70257016 + L1M4 LINE L1 4204 4424 -1722 605 254 37 49 chr5 132830060 132830304 -70255228 - MLT1J2 LTR MaLR -209 241 1 488 275 179 34 chr5 132830434 132830758 -70254774 - MLT1L LTR MaLR -206 409 39 570 320 81 22 chr5 132830927 132831333 -70254199 + L1ME LINE L1 2335 2764 -3382 503 229 93 27 chr5 132831357 132831689 -70253843 + L1ME LINE L1 2897 3250 -2896 364 169 22 22 chr5 132831983 132832072 -70253460 + L1P3 LINE L1 1 89 -5786 2843 89 20 10 chr5 132832073 132832477 -70253055 + L1PA10 LINE L1 5761 6168 0 391 306 68 0 chr5 132832575 132832840 -70252692 + L1ME LINE L1 3663 3945 -2201 666 314 73 29 chr5 132832873 132833276 -70252256 + L1ME LINE L1 4099 4520 -1626 275 264 49 14 chr5 132833366 132833510 -70252022 + L1ME LINE L1 5717 5865 -297 2129 140 0 3 chr5 132833961 132834275 -70251257 + AluSq SINE Alu 1 313 0 279 299 0 0 chr5 132835515 132835592 -70249940 + CT-rich Low_complexity Low_complexity 3 79 0 222 236 0 55 chr5 132837475 132837530 -70248002 - L2 LINE L2 -2 3270 3219 370 243 85 79 chr5 132837836 132838025 -70247507 - L2 LINE L2 0 3313 3124 462 162 43 34 chr5 132838025 132838142 -70247390 + MER53 DNA DNA 1 118 -71 * 640 112 26 26 chr5 132838141 132838257 -70247275 + MER53 DNA DNA 74 189 0 216 135 0 0 chr5 132838743 132838780 -70246752 + (CA)n Simple_repeat Simple_repeat 2 38 0 2360 65 0 53 chr5 132839699 132840020 -70245512 + AluY SINE Alu 1 304 -7 2193 43 0 0 chr5 132840020 132840275 -70245257 + AluY SINE Alu 42 296 -15 1662 135 21 77 chr5 132840964 132841290 -70244242 - AluJo SINE Alu 0 312 5 292 161 21 86 chr5 132842175 132842268 -70243264 - L1MC5 LINE L1 -64 7897 7811 957 240 68 40 chr5 132842350 132842804 -70242728 - L1MC5 LINE L1 -184 7777 7311 988 241 87 4 chr5 132842805 132843058 -70242474 - L2 LINE L2 -550 2764 2491 1817 219 20 155 chr5 132843595 132844312 -70241220 + L1MD1 LINE L1 3283 3900 -2246 517 181 21 0 chr5 132844312 132844406 -70241126 + FLAM_A SINE Alu 21 116 -26 1817 219 20 155 chr5 132844406 132844723 -70240809 + L1MD1 LINE L1 3900 4258 -1888 393 75 0 0 chr5 132844723 132844776 -70240756 + (GGA)n Simple_repeat Simple_repeat 2 54 0 270 231 77 10 chr5 132844830 132844934 -70240598 + L1MD1 LINE L1 4273 4383 -1763 1022 189 0 21 chr5 132844936 132845126 -70240406 + AluJo SINE Alu 1 186 -126 2595 171 117 8 chr5 132845126 132845723 -70239809 + L1MD1 LINE L1 5380 6041 -201 14802 152 23 7 chr5 132845761 132852034 -70233498 + L1MA2 LINE L1 1347 7723 0 255 348 9 45 chr5 132852332 132852444 -70233088 - L3 LINE CR1 -79 1498 1391 827 278 31 21 chr5 132852523 132852814 -70232718 - MLT1I LTR MaLR 0 409 116 1607 153 21 38 chr5 132852875 132853162 -70232370 + AluJo SINE Alu 1 282 -30 2087 98 25 0 chr5 132854378 132854703 -70230829 - AluSx SINE Alu 0 332 1 1050 353 110 7 chr5 132856891 132857447 -70228085 - L3 LINE CR1 -16 1561 949 205 154 103 0 chr5 132857688 132857727 -70227805 - L2 LINE L2 0 3313 3271 202 328 35 19 chr5 132858148 132858261 -70227271 + MIR SINE MIR 2 117 -91 23 0 0 0 chr5 132858619 132858642 -70226890 + AT_rich Low_complexity Low_complexity 1 23 0 327 338 7 22 chr5 132859147 132859286 -70226246 + MIR SINE MIR 8 144 -118 594 258 38 6 chr5 132859317 132859476 -70226056 + MIR SINE MIR 77 240 -22 255 61 0 0 chr5 132859486 132859519 -70226013 + (CAT)n Simple_repeat Simple_repeat 3 35 0 237 244 0 0 chr5 132859542 132859587 -70225945 + L2 LINE L2 3211 3255 -17 556 204 0 0 chr5 132859863 132859966 -70225566 + U13 snRNA snRNA 1 103 -1 24 0 0 0 chr5 132860876 132860900 -70224632 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 132861971 132862000 -70223532 + AT_rich Low_complexity Low_complexity 1 29 0 3102 42 3 0 chr5 132864317 132864695 -70220837 - L1PA4 LINE L1 -7 6148 5770 41415 44 4 1 chr5 132864707 132870841 -70214691 - L1HS LINE L1 0 6155 7 1787 193 26 81 chr5 132870939 132871198 -70214334 + MER34B LTR ERV1 5 224 -341 2176 123 3 0 chr5 132871198 132871498 -70214034 + AluSp SINE Alu 1 301 -12 1787 193 26 81 chr5 132871498 132871745 -70213787 + MER34B LTR ERV1 224 483 -82 1509 212 77 31 chr5 132871745 132872160 -70213372 - MER57B LTR ERV1 0 434 1 452 169 37 75 chr5 132872162 132872331 -70213201 - MER57B-int LTR ERV1 -1 7536 6973 1198 278 32 67 chr5 132874064 132874942 -70210590 - MER57B-int LTR ERV1 -1343 6194 2145 1455 209 4 91 chr5 132874951 132875448 -70210084 - MER57B-int LTR ERV1 -1775 5762 5309 326 289 39 39 chr5 132876237 132876393 -70209139 - MER57B-int LTR ERV1 -4479 3947 3792 315 392 6 0 chr5 132876700 132876858 -70208674 - MER57B-int LTR ERV1 -4094 2707 2549 5859 185 25 27 chr5 132876910 132878304 -70207228 - L1M1 LINE L1 -4065 1263 16 280 139 0 165 chr5 132878436 132878472 -70207060 - MER57B-int LTR ERV1 -4387 3369 3351 2195 105 17 0 chr5 132878472 132878766 -70206766 - AluSq SINE Alu -14 299 1 280 139 0 165 chr5 132878766 132878808 -70206724 - MER57B-int LTR ERV1 -4405 3351 3304 592 297 18 12 chr5 132880886 132881150 -70204382 - MER57B-int LTR ERV1 -7239 298 3 1456 207 15 29 chr5 132881154 132881497 -70204035 - MER57B LTR ERV1 0 434 97 334 191 48 24 chr5 132881554 132881638 -70203894 + MER34C LTR ERV1 500 585 0 287 243 86 57 chr5 132881910 132882050 -70203482 + MER103 DNA DNA 22 165 -1 787 312 49 29 chr5 132883060 132883551 -70201981 - MARNA DNA Mariner -59 527 27 2737 75 5 10 chr5 132883751 132884138 -70201394 + L1PA8 LINE L1 5786 6170 -2 204 291 101 13 chr5 132884437 132884516 -70201016 + L2 LINE L2 3199 3284 -29 333 303 51 63 chr5 132884795 132884970 -70200562 + MLT1J LTR MaLR 4 176 -335 2491 162 53 5 chr5 132885270 132885701 -70199831 - LTR32 LTR ERVL -5 466 15 485 147 0 0 chr5 132885681 132885756 -70199776 - LTR32 LTR ERVL -383 88 14 * 300 319 150 38 chr5 132885765 132886079 -70199453 - LTR16A LTR ERVL -95 355 7 206 232 18 36 chr5 132886628 132886684 -70198848 + MIR3 SINE MIR 103 157 -51 1290 258 60 54 chr5 132886687 132887172 -70198360 - LTR33A LTR ERVL -33 490 3 180 0 0 0 chr5 132888481 132888501 -70197031 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 319 309 15 37 chr5 132889555 132889691 -70195841 + MER5B DNA MER1_type 1 133 -45 374 267 17 87 chr5 132889748 132889920 -70195612 - L3 LINE CR1 -105 1472 1313 298 308 174 58 chr5 132889933 132890455 -70195077 + L3 LINE CR1 678 1260 -317 2128 143 98 15 chr5 132890796 132891195 -70194337 - MSTB1 LTR MaLR 0 432 1 629 288 61 62 chr5 132891412 132891879 -70193653 - L1M4 LINE L1 -1010 5136 4669 551 154 91 0 chr5 132891879 132891989 -70193543 + L1MB1 LINE L1 6049 6168 0 629 288 61 62 chr5 132891989 132892244 -70193288 - L1M4 LINE L1 -1477 4669 4415 252 283 162 25 chr5 132892604 132892802 -70192730 + L3 LINE CR1 1344 1568 -9 342 193 9 37 chr5 132893332 132893441 -70192091 + (TATG)n Simple_repeat Simple_repeat 3 108 0 200 269 0 15 chr5 132893450 132893517 -70192015 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 279 0 0 0 chr5 132894833 132894864 -70190668 + (TTA)n Simple_repeat Simple_repeat 2 32 0 3717 100 4 9 chr5 132895451 132896003 -70189529 + L1PB2 LINE L1 5596 6144 -7 234 212 61 0 chr5 132896984 132897050 -70188482 + MER20B DNA MER1_type 36 105 -678 226 133 0 50 chr5 132897469 132897529 -70188003 - L1MC5 LINE L1 -44 7917 7861 199 157 157 0 chr5 132898366 132898417 -70187115 + MIR SINE MIR 81 139 -123 388 222 19 0 chr5 132898839 132898947 -70186585 + GA-rich Low_complexity Low_complexity 3 112 0 1013 220 0 11 chr5 132899855 132900041 -70185491 - MER5A DNA MER1_type -5 184 1 236 257 27 40 chr5 132900608 132900682 -70184850 - MIR SINE MIR -34 228 156 940 175 7 0 chr5 132900796 132900950 -70184582 + FRAM SINE Alu 2 156 -10 180 340 30 10 chr5 132901101 132901201 -70184331 + L3 LINE CR1 1433 1534 -43 2391 49 0 43 chr5 132901618 132901923 -70183609 - AluY SINE Alu -18 293 2 28 0 0 0 chr5 132901974 132902002 -70183530 + AT_rich Low_complexity Low_complexity 1 28 0 289 268 12 24 chr5 132902068 132902150 -70183382 + MIR SINE MIR 25 105 -157 570 258 33 50 chr5 132902261 132902443 -70183089 + MIR SINE MIR 41 219 -43 256 343 77 7 chr5 132903282 132903425 -70182107 - MIR3 SINE MIR -3 205 53 2140 151 33 41 chr5 132904191 132904740 -70180792 + MLT2A2 LTR ERVL 1 553 -1 359 305 28 35 chr5 132905183 132905324 -70180208 + MIR3 SINE MIR 6 145 -63 366 172 5 0 chr5 132906945 132907029 -70178503 - HsTC2 DNA Tc2 -1811 87 2 2231 194 15 9 chr5 132907082 132907540 -70177992 - MER65C LTR ERV1 0 461 1 299 78 20 0 chr5 132907709 132907760 -70177772 - L1PB2 LINE L1 -3 6205 6154 15451 177 10 3 chr5 132907779 132911721 -70173811 - L1PB2 LINE L1 -126 6082 2116 1296 135 32 28 chr5 132911712 132911994 -70173538 + L1PBa LINE L1 1801 2083 -4780 * 540 125 0 0 chr5 132911982 132912070 -70173462 + L1PBa LINE L1 2786 2873 -3990 * 3237 123 69 0 chr5 132912069 132912607 -70172925 - L1PB2 LINE L1 -4142 2062 1488 898 55 0 0 chr5 132912607 132912717 -70172815 + AluY SINE Alu 190 299 -12 3794 126 38 4 chr5 132912718 132913738 -70171794 - L1PB2 LINE L1 -4705 1499 442 288 170 0 0 chr5 132915172 132915225 -70170307 + GA-rich Low_complexity Low_complexity 2 54 0 261 311 76 0 chr5 132915387 132915519 -70170013 - L1M4 LINE L1 -1968 4178 4037 3241 105 40 10 chr5 132915603 132916083 -70169449 + L1PA10 LINE L1 3680 4177 -1969 1805 156 0 0 chr5 132916083 132916353 -70169179 + AluSx SINE Alu 5 274 -38 3241 105 40 10 chr5 132916353 132916368 -70169164 + L1PA10 LINE L1 4177 4190 -1956 360 117 39 13 chr5 132916372 132916449 -70169083 + GA-rich Low_complexity Low_complexity 3 81 0 7057 137 20 0 chr5 132916451 132918481 -70167051 + L1PA10 LINE L1 4147 6163 -5 269 119 85 0 chr5 132918493 132918552 -70166980 - L1M4 LINE L1 -2206 3940 3877 1653 187 24 0 chr5 132918920 132919209 -70166323 - AluJb SINE Alu -16 296 1 283 232 62 70 chr5 132919370 132919629 -70165903 - L1M4 LINE L1 -2921 3225 2969 22 35 0 0 chr5 132919665 132919694 -70165838 + AT_rich Low_complexity Low_complexity 1 29 0 3706 99 19 109 chr5 132920041 132920738 -70164794 - MER51A LTR ERV1 0 634 1 666 235 46 32 chr5 132920918 132921135 -70164397 - L1ME2 LINE L1 -23 6141 5922 2439 71 0 0 chr5 132921136 132921432 -70164100 - AluY SINE Alu -13 298 3 749 180 0 0 chr5 132921494 132921616 -70163916 - FAM SINE Alu -63 122 1 1573 232 81 8 chr5 132921623 132922084 -70163448 - L1ME2 LINE L1 -345 5819 5305 47 19 0 0 chr5 132923318 132923372 -70162160 + AT_rich Low_complexity Low_complexity 1 54 0 469 204 131 110 chr5 132923435 132923626 -70161906 + MER58C DNA MER1_type 21 215 0 1473 158 58 17 chr5 132924638 132924930 -70160602 + MER68 LTR ERV1 2 305 -257 399 56 53 0 chr5 132925314 132925379 -70160153 + L1P1 LINE L1 5700 5771 -384 6416 87 16 2 chr5 132925674 132927072 -70158460 + L1PA11 LINE L1 4766 6173 -1 883 244 42 27 chr5 132927080 132927393 -70158139 + LTR16A LTR ERVL 91 443 -7 672 281 21 50 chr5 132928694 132928936 -70156596 + MIR SINE MIR 3 237 -25 199 251 56 70 chr5 132928986 132929088 -70156444 + MIR SINE MIR 51 150 -64 455 291 30 59 chr5 132929169 132929372 -70156160 - MIR SINE MIR -25 237 41 263 304 10 29 chr5 132929806 132929908 -70155624 + MER119 DNA MER1_type 4 103 -480 409 254 44 0 chr5 132929926 132930040 -70155492 + MER119 DNA MER1_type 460 578 -5 1497 167 39 32 chr5 132930079 132930361 -70155171 - AluJo SINE Alu -28 284 1 307 303 178 14 chr5 132930361 132930569 -70154963 - L1ME LINE L1 -563 5558 5317 3118 58 10 5 chr5 132930572 132930983 -70154549 - L1PA5 LINE L1 0 6154 5742 262 288 235 39 chr5 132931180 132931333 -70154199 - L2 LINE L2 -25 3288 3106 763 297 130 32 chr5 132931702 132932140 -70153392 - L2 LINE L2 -588 2726 2246 1201 191 9 5 chr5 132932309 132932524 -70153008 + MER58A DNA MER1_type 1 216 -8 404 298 31 38 chr5 132932692 132932897 -70152635 - MIR SINE MIR -20 242 7 33 0 0 0 chr5 132934476 132934509 -70151023 + AT_rich Low_complexity Low_complexity 1 33 0 2036 205 32 74 chr5 132934575 132935199 -70150333 + L1MC4 LINE L1 7445 8042 0 218 219 141 16 chr5 132936900 132936964 -70148568 + L2 LINE L2 3201 3272 0 785 232 119 40 chr5 132937047 132937349 -70148183 - MER46C DNA MER2_type 0 338 13 345 24 0 0 chr5 132938558 132938600 -70146932 + (CA)n Simple_repeat Simple_repeat 2 43 0 227 365 42 0 chr5 132939178 132939274 -70146258 + MIR3 SINE MIR 88 187 -21 2069 126 26 0 chr5 132939293 132939595 -70145937 - AluSq SINE Alu 0 313 4 250 246 66 82 chr5 132940475 132940597 -70144935 - MER5B DNA MER1_type -8 170 51 210 222 0 0 chr5 132941238 132941292 -70144240 + GA-rich Low_complexity Low_complexity 4 57 0 337 167 73 50 chr5 132941911 132941991 -70143541 + MIR SINE MIR 31 111 -97 952 221 121 57 chr5 132942207 132942627 -70142905 + LTR37B LTR ERV1 22 468 0 290 252 50 43 chr5 132943227 132943366 -70142166 + HAL1 LINE L1 2246 2385 -122 23 33 0 0 chr5 132943424 132943454 -70142078 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 132943870 132943891 -70141641 + AT_rich Low_complexity Low_complexity 1 21 0 225 204 0 0 chr5 132944426 132944470 -70141062 + A-rich Low_complexity Low_complexity 1 44 0 636 227 69 25 chr5 132944533 132944736 -70140796 + L2 LINE L2 681 892 -2422 21 36 0 0 chr5 132944753 132944781 -70140751 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 132945073 132945096 -70140436 + AT_rich Low_complexity Low_complexity 1 23 0 380 321 139 14 chr5 132946221 132946436 -70139096 + MIR SINE MIR 21 262 0 28 0 0 0 chr5 132947463 132947491 -70138041 + AT_rich Low_complexity Low_complexity 1 28 0 4660 39 4 0 chr5 132947661 132948223 -70137309 + L1PA5 LINE L1 5583 6146 -8 22 0 0 0 chr5 132948226 132948248 -70137284 + AT_rich Low_complexity Low_complexity 1 22 0 568 301 141 26 chr5 132948570 132949267 -70136265 + HAL1b LINE L1 60 836 -512 549 343 54 38 chr5 132949391 132949764 -70135768 + L1MEc LINE L1 30 408 -5988 294 238 133 10 chr5 132949814 132949971 -70135561 + MLT1H1 LTR MaLR 249 447 -108 829 245 11 5 chr5 132950516 132950700 -70134832 - HERVL68 LTR ERVL -1431 1606 1422 1579 143 32 47 chr5 132951007 132951310 -70134222 - AluJb SINE Alu 0 305 7 6144 120 194 89 chr5 132951710 132953245 -70132287 - pTR5 LTR ERV1 0 2438 743 1256 104 36 0 chr5 132954145 132954337 -70131195 - L1PA13 LINE L1 -5 6158 5960 242 178 22 0 chr5 132956175 132956220 -70129312 + MER57B LTR ERV1 323 368 -66 29 28 0 0 chr5 132956220 132956256 -70129276 + AT_rich Low_complexity Low_complexity 1 36 0 1821 133 0 0 chr5 132956524 132956794 -70128738 + AluSx SINE Alu 41 310 -2 1204 186 60 11 chr5 132957167 132957436 -70128096 - L1MB7 LINE L1 -10 6174 5893 7178 226 91 18 chr5 132957439 132959639 -70125893 - L1M4c LINE L1 -4635 2324 11 1063 181 65 0 chr5 132960132 132960331 -70125201 - Tigger2a DNA MER2_type 0 444 233 1197 153 16 76 chr5 132960619 132960868 -70124664 - Tigger2a DNA MER2_type -200 234 1 385 274 26 26 chr5 132961442 132961559 -70123973 + L2 LINE L2 3197 3313 0 204 259 17 17 chr5 132961560 132961618 -70123914 + (TAAG)n Simple_repeat Simple_repeat 3 60 0 226 286 0 0 chr5 132962037 132962086 -70123446 + polypurine Low_complexity Low_complexity 3 51 0 43 20 0 0 chr5 132962312 132962362 -70123170 + AT_rich Low_complexity Low_complexity 1 50 0 2282 81 0 3 chr5 132962369 132962665 -70122867 - AluY SINE Alu -15 296 2 5308 55 0 0 chr5 132963484 132964144 -70121388 + L1PA7 LINE L1 5488 6147 -7 6186 159 31 7 chr5 132964368 132966378 -70119154 + L1PA16 LINE L1 4102 6157 -9 22 35 0 0 chr5 132966381 132966410 -70119122 + AT_rich Low_complexity Low_complexity 1 29 0 435 83 0 0 chr5 132967031 132967091 -70118441 + (CA)n Simple_repeat Simple_repeat 1 60 0 403 187 0 27 chr5 132968421 132968496 -70117036 + L2 LINE L2 3240 3312 -1 1435 301 109 47 chr5 132969324 132970217 -70115315 + L2 LINE L2 1973 2920 -394 419 220 101 9 chr5 132970252 132970361 -70115171 - MIR SINE MIR -79 183 65 209 216 0 20 chr5 132970494 132970545 -70114987 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 22 0 0 0 chr5 132970983 132971005 -70114527 + AT_rich Low_complexity Low_complexity 1 22 0 2168 100 0 13 chr5 132971270 132971570 -70113962 - AluSg SINE Alu -12 298 3 505 167 123 43 chr5 132971762 132971900 -70113632 + MER58C DNA MER1_type 66 214 -1 247 241 35 0 chr5 132973421 132973479 -70112053 + GA-rich Low_complexity Low_complexity 3 62 0 460 136 207 77 chr5 132973829 132973998 -70111534 + LTR37A LTR ERV1 18 208 -218 1206 150 0 0 chr5 132974316 132974496 -70111036 + AluSg/x SINE Alu 120 299 -13 221 323 0 0 chr5 132974704 132974769 -70110763 + MIR3 SINE MIR 114 178 -30 264 319 26 35 chr5 132975348 132975461 -70110071 - L2 LINE L2 -4 3309 3198 982 24 0 16 chr5 132975777 132975904 -70109628 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 45 55 0 0 chr5 132977442 132977515 -70108017 + AT_rich Low_complexity Low_complexity 1 73 0 298 314 220 5 chr5 132978331 132978522 -70107010 + MIR SINE MIR 20 251 -11 553 263 54 31 chr5 132979230 132979333 -70106199 + L1ME4a LINE L1 5852 5951 -170 2136 119 3 13 chr5 132979333 132979644 -70105888 + AluSx SINE Alu 1 308 -4 553 263 54 31 chr5 132979644 132979799 -70105733 + L1ME4a LINE L1 5951 6116 -5 21 36 0 0 chr5 132980321 132980349 -70105183 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr5 132980379 132980415 -70105117 + AT_rich Low_complexity Low_complexity 1 36 0 296 56 0 0 chr5 132981433 132981469 -70104063 - tRNA-Glu-GAG tRNA tRNA -38 37 2 1660 138 4 0 chr5 132981574 132981850 -70103682 - L1MA4 LINE L1 -11 6289 6013 231 346 39 37 chr5 132981876 132982069 -70103463 + MIR3 SINE MIR 10 200 -62 180 77 0 0 chr5 132982943 132982969 -70102563 + (A)n Simple_repeat Simple_repeat 1 26 0 300 328 74 5 chr5 132983163 132983352 -70102180 + L1MEd LINE L1 600 801 -5318 233 277 210 26 chr5 132983395 132983590 -70101942 + L1ME LINE L1 5612 5842 -328 23 0 0 0 chr5 132983709 132983732 -70101800 + AT_rich Low_complexity Low_complexity 1 23 0 1970 219 52 50 chr5 132983849 132984388 -70101144 + MLT1F LTR MaLR 3 542 0 283 330 78 0 chr5 132984696 132984799 -70100733 - MIR3 SINE MIR -9 199 89 703 248 0 19 chr5 132985739 132985953 -70099579 + L1ME4a LINE L1 4702 4911 -1235 897 219 0 0 chr5 132985982 132986142 -70099390 - FRAM SINE Alu -17 159 1 796 224 88 30 chr5 132986153 132986560 -70098972 + L1MC5 LINE L1 7477 7907 -54 226 256 56 0 chr5 132986621 132986711 -70098821 + L1ME4a LINE L1 5773 5867 -254 3989 199 79 25 chr5 132986752 132988379 -70097153 + L1MCb LINE L1 3 1723 -4841 781 216 0 0 chr5 132988379 132988518 -70097014 + Tigger1 DNA MER2_type 1 139 -2279 1216 162 0 14 chr5 132988530 132988746 -70096786 + Tigger1 DNA MER2_type 2206 2418 0 468 114 25 0 chr5 132988746 132988825 -70096707 + L1MCb LINE L1 1722 1802 -4762 * 1607 165 35 10 chr5 132988824 132988847 -70096685 + L1MC2 LINE L1 5185 5206 -1138 9016 38 3 2 chr5 132988847 132989917 -70095615 + MER11C LTR ERVK 1 1071 0 1607 165 35 10 chr5 132989917 132990874 -70094658 + L1MC2 LINE L1 5206 6326 -18 257 152 167 0 chr5 132990979 132991045 -70094487 + L1ME4a LINE L1 6017 6093 -28 21 0 0 0 chr5 132991512 132991533 -70093999 + AT_rich Low_complexity Low_complexity 1 21 0 1402 198 12 4 chr5 132992191 132992444 -70093088 + AluJo SINE Alu 43 297 -15 26 0 0 0 chr5 132992792 132992818 -70092714 + AT_rich Low_complexity Low_complexity 1 26 0 1845 179 7 16 chr5 132996579 132996887 -70088645 + AluJo SINE Alu 1 305 -7 213 94 0 0 chr5 132996896 132996928 -70088604 + (A)n Simple_repeat Simple_repeat 1 32 0 2635 153 17 73 chr5 132996995 132997468 -70088064 + L1MB1 LINE L1 5602 6035 -133 2388 88 0 3 chr5 132997468 132997765 -70087767 + AluSx SINE Alu 1 296 -16 2635 153 17 73 chr5 132997765 132997892 -70087640 + L1MB1 LINE L1 6035 6168 0 183 343 105 0 chr5 132998194 132998299 -70087233 - L2 LINE L2 -13 3300 3185 4401 209 53 93 chr5 132999408 133000547 -70084985 + L1MA5 LINE L1 1 1184 -6024 2027 124 3 3 chr5 133000547 133000829 -70084703 + AluSx SINE Alu 1 282 -30 4401 209 53 93 chr5 133000829 133001159 -70084373 + L1MA5 LINE L1 1184 1526 -5682 336 250 24 0 chr5 133001159 133001243 -70084289 + U13 snRNA snRNA 19 104 0 4401 209 53 93 chr5 133001243 133002364 -70083168 + L1MA5 LINE L1 1526 3405 -3803 1143 230 0 9 chr5 133002365 133002595 -70082937 + MER8 DNA MER2_type 10 237 -2 9800 136 47 120 chr5 133002597 133004569 -70080963 + L1MA5 LINE L1 3396 5510 -1852 1541 158 52 8 chr5 133004569 133004913 -70080619 - MSTB LTR MaLR 0 426 3 9800 136 47 120 chr5 133004913 133005308 -70080224 + L1MA5 LINE L1 5510 5932 -1430 2274 90 0 10 chr5 133005308 133005608 -70079924 + AluSc SINE Alu 1 297 -12 9800 136 47 120 chr5 133005608 133006230 -70079302 + L1MA5 LINE L1 5932 6598 -764 2084 119 3 19 chr5 133006230 133006548 -70078984 + AluSq SINE Alu 1 313 0 9800 136 47 120 chr5 133006548 133007485 -70078047 + L1MA5 LINE L1 6598 7360 -2 297 0 0 0 chr5 133007923 133007956 -70077576 + (A)n Simple_repeat Simple_repeat 1 33 0 1788 166 10 7 chr5 133008308 133008604 -70076928 - AluJo SINE Alu -15 297 1 277 266 93 29 chr5 133008728 133008867 -70076665 - L1ME LINE L1 -589 5532 5385 881 318 95 24 chr5 133009087 133009588 -70075944 + L2 LINE L2 2750 3313 0 2322 143 13 67 chr5 133009950 133010029 -70075503 + MSTC LTR MaLR 5 87 -341 2327 73 0 17 chr5 133010029 133010330 -70075202 + AluY SINE Alu 1 296 -15 2322 143 13 67 chr5 133010330 133010698 -70074834 + MSTC LTR MaLR 87 428 0 262 280 80 13 chr5 133010944 133011019 -70074513 - MIR SINE MIR -171 91 12 190 388 62 0 chr5 133011046 133011126 -70074406 + MIR SINE MIR 10 94 -168 288 236 28 0 chr5 133011542 133011614 -70073918 + MLT1I LTR MaLR 82 155 -254 1655 93 4 30 chr5 133011620 133011857 -70073675 + AluSg/x SINE Alu 65 295 -14 182 291 137 51 chr5 133012379 133012496 -70073036 - L2 LINE L2 -27 3286 3160 732 211 0 39 chr5 133013442 133013598 -70071934 - FRAM SINE Alu -22 154 5 291 198 23 47 chr5 133014454 133014540 -70070992 + LTR33A LTR ERVL 434 517 -6 21 0 0 0 chr5 133014614 133014635 -70070897 + AT_rich Low_complexity Low_complexity 1 21 0 231 36 0 0 chr5 133014635 133014663 -70070869 + (GA)n Simple_repeat Simple_repeat 2 29 0 2353 71 0 3 chr5 133014663 133014958 -70070574 - AluSc SINE Alu -7 302 9 26 50 0 0 chr5 133015177 133015217 -70070315 + AT_rich Low_complexity Low_complexity 1 40 0 1938 169 0 0 chr5 133015282 133015589 -70069943 + AluSx SINE Alu 1 307 -5 1517 165 4 12 chr5 133015647 133015896 -70069636 + AluJo SINE Alu 50 296 -16 282 298 82 34 chr5 133015957 133016165 -70069367 - MER112 DNA MER1_type -14 246 29 225 287 153 40 chr5 133018078 133018228 -70067304 + MER5A DNA MER1_type 18 184 -5 3484 106 92 25 chr5 133018661 133019713 -70065819 + MER11A LTR ERVK 1 1232 -4 1325 184 87 88 chr5 133019836 133020563 -70064969 + LTR1B LTR ERV1 1 787 -39 229 347 120 13 chr5 133020659 133020809 -70064723 - L2 LINE L2 -805 2509 2344 1658 177 91 34 chr5 133020907 133021372 -70064160 - LTR10A LTR ERV1 -61 548 1 5479 241 15 25 chr5 133021374 133022875 -70062657 - LTR10A-int LTR ERV1 -3 6646 5162 7417 106 13 1 chr5 133022936 133024115 -70061417 - Harlequin LTR ERV1 -3221 3984 1843 677 148 9 0 chr5 133024367 133024482 -70061050 - 5S rRNA rRNA 0 121 6 401 314 89 54 chr5 133024617 133024989 -70060543 - L1MEd LINE L1 -4863 1256 872 34981 83 30 10 chr5 133025011 133031029 -70054503 - L1PA6 LINE L1 -5 6149 11 357 202 167 0 chr5 133031091 133031175 -70054357 + LTR8 LTR ERV1 156 253 -438 944 82 0 0 chr5 133031179 133031313 -70054219 - MER51B-int LTR ERV1 -5178 1718 1585 5240 99 21 47 chr5 133031320 133032377 -70053155 - MER51B-int LTR ERV1 -5819 1077 704 258 189 133 56 chr5 133032385 133032475 -70053057 - MER51B-int LTR ERV1 -5578 1071 975 6931 105 9 19 chr5 133032856 133033923 -70051609 - MER11C LTR ERVK -14 1057 1 372 234 102 0 chr5 133034093 133034221 -70051311 - MER51B-int LTR ERV1 -7357 428 288 807 239 73 7 chr5 133034247 133034519 -70051013 - MER51B-int LTR ERV1 -6310 339 50 2252 122 18 63 chr5 133035356 133035751 -70049781 - MER51B LTR ERV1 0 377 1 2151 128 0 7 chr5 133035791 133036087 -70049445 + AluSg SINE Alu 1 294 -16 186 43 0 0 chr5 133036568 133036591 -70048941 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2022 99 4 8 chr5 133036593 133036856 -70048676 - AluSg SINE Alu -22 288 27 5927 59 8 118 chr5 133036856 133037783 -70047749 + LTR12 LTR ERV1 2 826 0 22029 105 17 9 chr5 133037796 133040870 -70044662 + HERV9 LTR ERV1 40 3139 -5260 6150 96 29 8 chr5 133040879 133041734 -70043798 + HERV9 LTR ERV1 4082 4954 -3445 1942 105 19 51 chr5 133041727 133042530 -70043002 + HERV17 LTR ERV1 706 1659 -5237 * 2076 99 35 6 chr5 133042630 133042944 -70042588 + L1MA5 LINE L1 5976 6298 -2 297 0 0 0 chr5 133043382 133043415 -70042117 + (A)n Simple_repeat Simple_repeat 1 33 0 1776 162 10 10 chr5 133043766 133044063 -70041469 - AluJo SINE Alu -15 297 1 320 266 93 29 chr5 133044187 133044326 -70041206 - L1ME LINE L1 -589 5532 5385 728 319 95 24 chr5 133044547 133045048 -70040484 + L2 LINE L2 2750 3313 0 2415 145 11 67 chr5 133045410 133045489 -70040043 + MSTC LTR MaLR 5 87 -341 2367 73 0 17 chr5 133045489 133045790 -70039742 + AluY SINE Alu 1 296 -15 2415 145 11 67 chr5 133045790 133046159 -70039373 + MSTC LTR MaLR 87 428 0 237 280 80 13 chr5 133046405 133046480 -70039052 - MIR SINE MIR -171 91 12 302 225 42 0 chr5 133047003 133047074 -70038458 + MLT1I LTR MaLR 82 155 -254 1639 97 4 34 chr5 133047080 133047318 -70038214 + AluSg/x SINE Alu 65 295 -14 215 202 0 60 chr5 133047929 133048013 -70037519 + A-rich Low_complexity Low_complexity 2 80 0 734 211 0 39 chr5 133048904 133049060 -70036472 - FRAM SINE Alu -22 154 5 312 209 23 47 chr5 133049916 133050002 -70035530 + LTR33A LTR ERVL 434 517 -6 198 0 0 0 chr5 133050080 133050102 -70035430 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 231 36 0 0 chr5 133050101 133050129 -70035403 + (GA)n Simple_repeat Simple_repeat 2 29 0 2387 71 0 3 chr5 133050129 133050424 -70035108 - AluSc SINE Alu -7 302 9 26 50 0 0 chr5 133050643 133050683 -70034849 + AT_rich Low_complexity Low_complexity 1 40 0 1939 169 0 0 chr5 133050747 133051054 -70034478 + AluSx SINE Alu 1 307 -5 1503 165 4 12 chr5 133051112 133051361 -70034171 + AluJo SINE Alu 50 296 -16 351 274 96 48 chr5 133051422 133051630 -70033902 - MER112 DNA MER1_type -14 246 29 189 291 165 24 chr5 133053566 133053693 -70031839 + MER5A DNA MER1_type 40 184 -5 3738 106 92 25 chr5 133054126 133055178 -70030354 + MER11A LTR ERVK 1 1232 -4 1515 182 87 88 chr5 133055301 133056028 -70029504 + LTR1B LTR ERV1 1 787 -39 1812 179 95 34 chr5 133056373 133056837 -70028695 - LTR10A LTR ERV1 -61 548 1 6108 237 19 29 chr5 133056839 133058340 -70027192 - LTR10A-int LTR ERV1 -3 6646 5162 7930 110 14 2 chr5 133058401 133059606 -70025926 - Harlequin LTR ERV1 -3631 4185 1843 740 139 9 0 chr5 133059831 133059946 -70025586 - 5S rRNA rRNA 0 121 6 285 304 28 51 chr5 133060081 133060295 -70025237 - L1MEd LINE L1 -4863 1256 1048 37521 83 30 10 chr5 133060470 133066486 -70019046 - L1PA6 LINE L1 -5 6149 11 391 202 167 0 chr5 133066548 133066632 -70018900 + LTR8 LTR ERV1 156 253 -438 1009 82 0 0 chr5 133066636 133066770 -70018762 - MER51B-int LTR ERV1 -5178 1718 1585 * 5718 94 19 67 chr5 133066745 133067910 -70017622 - MER51B-int LTR ERV1 -5481 1415 704 297 189 133 56 chr5 133067918 133068008 -70017524 - MER51B-int LTR ERV1 -5578 1071 975 7472 105 9 19 chr5 133068389 133069456 -70016076 - MER11C LTR ERVK -14 1057 1 1062 234 65 91 chr5 133069557 133070052 -70015480 - MER51B-int LTR ERV1 -6118 531 50 2308 122 18 63 chr5 133070889 133071284 -70014248 - MER51B LTR ERV1 0 377 1 2151 128 0 7 chr5 133071324 133071620 -70013912 + AluSg SINE Alu 1 294 -16 186 43 0 0 chr5 133072118 133072141 -70013391 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2022 99 4 8 chr5 133072143 133072406 -70013126 - AluSg SINE Alu -22 288 27 6071 61 8 94 chr5 133072406 133073309 -70012223 + LTR12 LTR ERV1 2 826 0 22103 105 17 8 chr5 133073322 133076396 -70009136 + HERV9 LTR ERV1 40 3139 -5260 6204 95 28 8 chr5 133076405 133077261 -70008271 + HERV9 LTR ERV1 4082 4954 -3445 2292 167 111 82 chr5 133077254 133078110 -70007422 + HERV9 LTR ERV1 840 1720 -5176 * 1727 78 17 4 chr5 133078105 133078336 -70007196 + HERV9 LTR ERV1 7757 7990 -409 * 402 179 119 12 chr5 133078337 133078421 -70007111 - L1PA13 LINE L1 -289 5874 5782 230 179 18 18 chr5 133078688 133078744 -70006788 + L1MD3 LINE L1 7926 7981 -14 24 0 0 0 chr5 133078745 133078769 -70006763 + AT_rich Low_complexity Low_complexity 1 24 0 1092 310 49 34 chr5 133079271 133079797 -70005735 + LTR67 LTR ERVL 16 549 -8 2098 242 13 29 chr5 133080125 133080650 -70004882 + LTR40a LTR ERVL 3 519 0 270 58 19 77 chr5 133081051 133081103 -70004429 - AluSg/q SINE Alu -80 223 175 901 102 0 0 chr5 133081103 133081221 -70004311 - AluSg SINE Alu -192 118 1 2354 114 29 0 chr5 133081221 133081563 -70003969 + Tigger1 DNA MER2_type 2064 2415 -3 27 29 0 0 chr5 133083789 133083823 -70001709 + AT_rich Low_complexity Low_complexity 1 34 0 1499 182 7 7 chr5 133084060 133084329 -70001203 - AluJo SINE Alu -14 298 30 2173 110 3 7 chr5 133084714 133085013 -70000519 + AluSq SINE Alu 1 298 -15 183 80 0 0 chr5 133085063 133085088 -70000444 + (A)n Simple_repeat Simple_repeat 1 25 0 347 146 45 11 chr5 133085353 133085442 -70000090 - L1PA10 LINE L1 0 6168 6077 377 49 0 98 chr5 133085911 133085993 -69999539 + L1PA2 LINE L1 6082 6155 0 4347 152 13 23 chr5 133086624 133087335 -69998197 - L1PA16 LINE L1 0 6155 5428 192 77 0 0 chr5 133087335 133087361 -69998171 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4347 152 13 23 chr5 133087361 133087480 -69998052 - L1PA16 LINE L1 -727 5428 5309 213 121 0 0 chr5 133087540 133087573 -69997959 + (T)n Simple_repeat Simple_repeat 1 33 0 1168 245 144 71 chr5 133087757 133088409 -69997123 - Charlie2b DNA MER1_type -2005 777 78 571 82 0 21 chr5 133088639 133088736 -69996796 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 217 294 24 95 chr5 133088979 133089050 -69996482 - L2 LINE L2 0 3272 3212 2306 106 0 0 chr5 133089050 133089353 -69996179 - AluSq SINE Alu -10 303 1 217 294 24 95 chr5 133089353 133089407 -69996125 - L2 LINE L2 -60 3212 3156 1254 164 19 10 chr5 133089895 133090102 -69995430 + AluJo SINE Alu 1 209 -103 1731 227 66 47 chr5 133090359 133090891 -69994641 - MLT2B3 LTR ERVL -12 542 1 1603 153 56 53 chr5 133092742 133093083 -69992449 - MER2 DNA MER2_type -2 342 1 208 261 0 0 chr5 133093263 133093309 -69992223 + L2 LINE L2 3268 3313 0 344 319 104 0 chr5 133094054 133094189 -69991343 + MIR SINE MIR 8 156 -106 372 348 48 31 chr5 133094296 133094589 -69990943 + MLT1I LTR MaLR 72 369 -40 231 234 0 0 chr5 133094773 133094820 -69990712 + MIR SINE MIR 206 252 -10 26 0 0 0 chr5 133095358 133095384 -69990148 + AT_rich Low_complexity Low_complexity 1 26 0 504 0 0 0 chr5 133096266 133096322 -69989210 + (TA)n Simple_repeat Simple_repeat 2 57 0 36 23 0 0 chr5 133096392 133096435 -69989097 + AT_rich Low_complexity Low_complexity 1 43 0 357 250 52 87 chr5 133096706 133096878 -69988654 - L3 LINE CR1 -9 1568 1403 448 266 175 19 chr5 133099081 133099235 -69986297 + MER5B DNA MER1_type 1 178 0 1878 190 0 3 chr5 133099520 133099831 -69985701 + AluSx SINE Alu 1 310 -2 2102 186 109 4 chr5 133099837 133100316 -69985216 + L1MA5A LINE L1 5484 6012 -285 1339 191 66 41 chr5 133100316 133100682 -69984850 + THE1C LTR MaLR 1 375 0 3946 137 13 62 chr5 133100685 133101458 -69984074 + THE1C-int LTR MaLR 4 738 -842 8580 28 40 0 chr5 133101564 133103337 -69982195 + L1PA5 LINE L1 4346 6153 -1 621 223 112 1 chr5 133103804 133104067 -69981465 - MLT1E1 LTR MaLR -288 366 56 33 43 0 0 chr5 133104119 133104166 -69981366 + AT_rich Low_complexity Low_complexity 1 47 0 306 0 0 0 chr5 133104349 133104383 -69981149 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr5 133104681 133104718 -69980814 + AT_rich Low_complexity Low_complexity 1 37 0 511 306 42 7 chr5 133104748 133104892 -69980640 - MIR SINE MIR -111 151 3 452 299 90 68 chr5 133105532 133106031 -69979501 - LTR67 LTR ERVL -4 553 44 521 255 21 7 chr5 133106076 133106217 -69979315 + L1PB4 LINE L1 5999 6141 -15 415 313 58 54 chr5 133106355 133106649 -69978883 - LTR16A1 LTR ERVL -2 455 161 1864 135 0 31 chr5 133107926 133108215 -69977317 - AluSx SINE Alu -15 297 18 24 32 0 0 chr5 133108550 133108581 -69976951 + AT_rich Low_complexity Low_complexity 1 31 0 284 343 19 0 chr5 133109415 133109523 -69976009 + MER58A DNA MER1_type 1 110 0 3218 237 48 44 chr5 133109623 133110936 -69974596 + HERVE LTR ERV1 73 1582 -6441 6349 147 3 15 chr5 133110937 133112010 -69973522 + HERVE LTR ERV1 2936 3995 -3818 206 207 17 17 chr5 133112219 133112277 -69973255 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 529 261 220 0 chr5 133112303 133112544 -69972988 + L2 LINE L2 2253 2546 -768 681 303 61 33 chr5 133112678 133113038 -69972494 + L2 LINE L2 2935 3304 -9 23 92 0 0 chr5 133113621 133113686 -69971846 + AT_rich Low_complexity Low_complexity 1 65 0 278 289 93 0 chr5 133113749 133113846 -69971686 - MIR SINE MIR -75 187 82 256 363 134 23 chr5 133114089 133114260 -69971272 - MIR SINE MIR -70 192 3 6412 210 40 10 chr5 133115128 133116768 -69968764 + HERVE LTR ERV1 4032 5977 -2170 2914 193 2 0 chr5 133116783 133117322 -69968210 + HERVE LTR ERV1 6356 6895 -1 1785 194 67 28 chr5 133117322 133117525 -69968007 + LTR2 LTR ERV1 1 195 -254 204 40 0 0 chr5 133117525 133117550 -69967982 + (TTCTG)n Simple_repeat Simple_repeat 1 25 0 1785 194 67 28 chr5 133117550 133117778 -69967754 + LTR2 LTR ERV1 195 449 0 1594 105 46 0 chr5 133117778 133118016 -69967516 + HERVL LTR ERVL 4863 5111 -543 1154 131 1 7 chr5 133118017 133118212 -69967320 - pTR5 LTR ERV1 -2046 392 66 332 204 31 20 chr5 133118212 133118310 -69967222 - LTR30 LTR ERV1 -80 642 544 4211 128 150 34 chr5 133118310 133119316 -69966216 - pTR5 LTR ERV1 -413 2025 743 3414 75 20 2 chr5 133119315 133119811 -69965721 + HERVL LTR ERVL 5108 5612 -42 * 2122 111 3 10 chr5 133119912 133120200 -69965332 - AluSx SINE Alu -26 286 1 1079 83 0 0 chr5 133120202 133120334 -69965198 - AluSq/x SINE Alu -180 132 1 28 0 0 0 chr5 133122821 133122849 -69962683 + AT_rich Low_complexity Low_complexity 1 28 0 2075 98 33 15 chr5 133123045 133123382 -69962150 + L1MA5 LINE L1 5956 6298 -2 315 0 0 0 chr5 133123820 133123855 -69961677 + (A)n Simple_repeat Simple_repeat 1 35 0 1314 199 12 12 chr5 133124209 133124465 -69961067 - AluJo SINE Alu -15 297 42 186 308 79 49 chr5 133226134 133226494 -69859038 + L2 LINE L2 2232 2667 -647 860 199 12 0 chr5 133226755 133226921 -69858611 - L1PA16 LINE L1 -4 6162 5995 2821 279 110 30 chr5 133227236 133228212 -69857320 - L2 LINE L2 -8 3305 2191 311 22 0 44 chr5 133228212 133228257 -69857275 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2821 279 110 30 chr5 133228257 133228578 -69856954 - L2 LINE L2 -1122 2191 1897 628 342 74 15 chr5 133228578 133228847 -69856685 - L2 LINE L2 -2811 503 219 403 313 229 8 chr5 133230330 133230570 -69854962 + L2 LINE L2 3020 3312 -1 22 0 0 0 chr5 133230914 133230936 -69854596 + AT_rich Low_complexity Low_complexity 1 22 0 246 294 110 0 chr5 133231389 133231498 -69854034 - MER94 DNA DNA 0 134 14 399 325 8 0 chr5 133232477 133232597 -69852935 + L2 LINE L2 3192 3312 -1 6667 74 3 0 chr5 133232751 133234365 -69851167 - L1PA7 LINE L1 -13 6141 4523 4176 152 24 32 chr5 133234372 133235354 -69850178 - MER11C LTR ERVK -6 1065 1 27241 117 16 16 chr5 133235354 133239872 -69845660 - L1P LINE L1 -1619 4527 11 543 224 8 8 chr5 133242039 133242164 -69843368 - AluJo SINE Alu -7 305 181 598 179 34 0 chr5 133242178 133242295 -69843237 - AluJo SINE Alu -188 124 4 282 258 21 21 chr5 133242376 133242469 -69843063 + L1MEc LINE L1 289 381 -6015 448 68 27 0 chr5 133242486 133242559 -69842973 + (GA)n Simple_repeat Simple_repeat 2 76 0 1045 254 78 16 chr5 133242597 133242916 -69842616 + L1MEc LINE L1 455 793 -5603 1754 151 60 0 chr5 133243260 133243544 -69841988 - AluSx SINE Alu -11 301 1 1176 301 40 12 chr5 133243567 133243966 -69841566 - HERV16 LTR ERVL -3878 1118 709 779 322 30 38 chr5 133244140 133244566 -69840966 - HERV16 LTR ERVL -4500 496 74 793 298 93 2 chr5 133244618 133244971 -69840561 - LTR16A LTR ERVL 0 457 57 249 296 112 46 chr5 133245116 133245268 -69840264 - MIR3 SINE MIR -27 181 20 3493 17 5 0 chr5 133245281 133245689 -69839843 - L1PA3 LINE L1 0 6155 5746 1755 10 0 0 chr5 133245689 133245884 -69839648 + L1P1 LINE L1 5490 5684 -471 26 0 0 0 chr5 133247360 133247386 -69838146 + AT_rich Low_complexity Low_complexity 1 26 0 1070 275 82 99 chr5 133247964 133248400 -69837132 - L1MC4 LINE L1 -144 7898 7456 2096 99 0 68 chr5 133248400 133248724 -69836808 + AluSc SINE Alu 1 302 -7 1070 275 82 99 chr5 133248724 133249503 -69836029 - L1MC4 LINE L1 -586 7456 6703 374 255 106 0 chr5 133249572 133249666 -69835866 + MER69A DNA AcHobo 58 161 -16 320 283 86 10 chr5 133249953 133250151 -69835381 - L1MC4a LINE L1 -1547 6261 6049 503 235 112 16 chr5 133250238 133250425 -69835107 + L2 LINE L2 3105 3309 -4 547 230 50 22 chr5 133250484 133250683 -69834849 - L1MC4a LINE L1 -303 5886 5673 28 29 0 0 chr5 133250684 133250719 -69834813 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 133251122 133251146 -69834386 + AT_rich Low_complexity Low_complexity 1 24 0 271 250 67 42 chr5 133252816 133252936 -69832596 + L1MEd LINE L1 13 135 -5984 1392 162 165 26 chr5 133252951 133253376 -69832156 + LTR54B LTR ERV1 14 497 -1 190 294 201 43 chr5 133255332 133255516 -69830016 - L3b LINE CR1 -4 1579 1367 998 244 28 0 chr5 133257117 133257334 -69828198 - MER58A DNA MER1_type -1 223 1 279 302 12 12 chr5 133257628 133257714 -69827818 + MIR3 SINE MIR 117 202 -6 2132 124 0 3 chr5 133257982 133258324 -69827208 - AluSx SINE Alu 0 312 3 360 246 139 16 chr5 133258400 133258522 -69827010 + HsTC2 DNA Tc2 4 140 -1758 1206 259 43 13 chr5 133258557 133258951 -69826581 + HsTC2 DNA Tc2 1306 1887 -11 3977 209 43 10 chr5 133259162 133259551 -69825981 - MER21B LTR ERV1 -22 841 466 2896 126 114 31 chr5 133259551 133259672 -69825860 + LTR24C LTR ERV1 1 110 -525 1924 104 3 58 chr5 133259672 133259980 -69825552 - AluSx SINE Alu -20 292 2 2896 126 114 31 chr5 133259980 133260444 -69825088 + LTR24C LTR ERV1 110 635 0 3977 209 43 10 chr5 133260444 133260868 -69824664 - MER21B LTR ERV1 -397 466 1 243 289 61 18 chr5 133260918 133261032 -69824500 + L2 LINE L2 3195 3313 0 266 28 56 42 chr5 133261629 133261700 -69823832 + (TATAA)n Simple_repeat Simple_repeat 4 75 0 406 317 122 47 chr5 133262308 133262856 -69822676 - L2 LINE L2 -58 3255 2670 697 332 61 9 chr5 133262930 133263159 -69822373 - MIR SINE MIR -21 241 1 187 264 32 128 chr5 133263199 133263324 -69822208 - L2 LINE L2 -755 2559 2447 822 269 50 92 chr5 133263479 133264014 -69821518 + MER34 LTR ERV1 1 513 -29 261 324 121 29 chr5 133265051 133265224 -69820308 + MIR SINE MIR 48 236 -26 2126 116 0 0 chr5 133265649 133265961 -69819571 - AluSx SINE Alu 0 312 1 362 327 13 7 chr5 133267663 133267813 -69817719 + LTR16C LTR ERVL 308 458 -33 239 287 63 35 chr5 133267871 133268014 -69817518 - L2 LINE L2 -572 2742 2596 7826 177 41 28 chr5 133268052 133268971 -69816561 - L1MA9 LINE L1 0 6312 5407 2688 39 0 0 chr5 133268971 133269282 -69816250 - AluY SINE Alu 0 311 1 7826 177 41 28 chr5 133269282 133269765 -69815767 - L1MA9 LINE L1 -905 5407 4932 2489 126 14 0 chr5 133269765 133270122 -69815410 + THE1B LTR MaLR 3 364 0 9759 101 39 67 chr5 133270122 133270654 -69814878 + THE1B-int LTR MaLR 1 546 -1034 213 39 0 0 chr5 133270654 133270680 -69814852 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 9759 101 39 67 chr5 133270680 133271771 -69813761 + THE1B-int LTR MaLR 546 1580 0 2539 114 6 0 chr5 133271771 133272131 -69813401 + THE1B LTR MaLR 1 362 -2 7826 177 41 28 chr5 133272131 133272841 -69812691 - L1MA9 LINE L1 -1380 4932 4233 741 28 47 0 chr5 133272841 133272947 -69812585 + (TTTC)n Simple_repeat Simple_repeat 1 111 0 7826 177 41 28 chr5 133272947 133273820 -69811712 - L1MA9 LINE L1 -2079 4233 3269 1678 171 66 23 chr5 133273822 133274202 -69811330 - L1MB7 LINE L1 -9 6175 5776 3034 140 11 0 chr5 133274202 133274674 -69810858 - L1PA15 LINE L1 -1 6164 5688 1678 171 66 23 chr5 133274674 133274685 -69810847 - L1MB7 LINE L1 -408 5776 5767 3040 212 7 31 chr5 133274742 133275426 -69810106 + L1P LINE L1 3652 4319 -1827 1044 153 19 0 chr5 133275431 133275588 -69809944 + AluSx SINE Alu 1 160 -152 1908 110 0 3 chr5 133275588 133275870 -69809662 - L1PA15 LINE L1 -1156 4990 4710 * 9280 80 2 1 chr5 133275867 133277126 -69808406 + L1PA15 LINE L1 3424 4683 -1463 302 289 0 0 chr5 133277178 133277261 -69808271 + L1 LINE L1 3733 3815 -2331 * 893 299 102 14 chr5 133277259 133277792 -69807740 - L1M3a LINE L1 -5339 616 2 334 211 0 13 chr5 133279003 133279079 -69806453 - L1MEc LINE L1 -6273 123 49 911 256 24 111 chr5 133279091 133279470 -69806062 + L2 LINE L2 1821 2166 -1148 1278 264 98 18 chr5 133279491 133279941 -69805591 - MER20B DNA MER1_type -16 767 270 2605 103 11 0 chr5 133279941 133280301 -69805231 - THE1B LTR MaLR 0 364 1 1278 264 98 18 chr5 133280301 133280362 -69805170 - MER20B DNA MER1_type -513 270 215 1502 309 125 18 chr5 133280496 133281473 -69804059 + L2 LINE L2 2213 3313 0 205 205 0 0 chr5 133281510 133281549 -69803983 + (TA)n Simple_repeat Simple_repeat 1 39 0 528 215 53 75 chr5 133281697 133281855 -69803677 - MLT1J2 LTR MaLR -245 205 65 22 0 0 0 chr5 133282037 133282059 -69803473 + AT_rich Low_complexity Low_complexity 1 22 0 189 107 0 0 chr5 133282268 133282296 -69803236 + (TCCCC)n Simple_repeat Simple_repeat 1 28 0 1251 168 5 18 chr5 133282296 133282516 -69803016 - AluJo SINE Alu -10 302 86 838 251 39 51 chr5 133282518 133282853 -69802679 - MLT1D LTR MaLR -174 331 1 324 335 66 30 chr5 133283088 133283255 -69802277 + MIR SINE MIR 49 221 -41 1292 159 22 9 chr5 133283333 133283559 -69801973 + MER50 LTR ERV1 1 229 -505 * 1614 162 3 44 chr5 133283553 133283868 -69801664 + MER50 LTR ERV1 433 734 0 380 219 28 118 chr5 133284419 133284597 -69800935 + L2 LINE L2 3152 3313 0 250 306 92 13 chr5 133285374 133285561 -69799971 + L1ME4a LINE L1 1397 1607 -4789 2182 103 0 0 chr5 133285561 133285842 -69799690 + AluSg SINE Alu 19 299 -11 250 306 92 13 chr5 133285842 133285883 -69799649 + L1ME4a LINE L1 1607 1643 -4753 249 288 121 20 chr5 133286259 133286505 -69799027 + L1ME4a LINE L1 5358 5625 -675 383 322 41 47 chr5 133286522 133286693 -69798839 + MER5B DNA MER1_type 3 172 -6 313 309 103 55 chr5 133286697 133287115 -69798417 + L1ME4a LINE L1 5650 6087 -103 1322 177 0 0 chr5 133288288 133288508 -69797024 + AluJb SINE Alu 85 304 -8 3255 115 17 56 chr5 133288546 133289139 -69796393 + L1PA13 LINE L1 5572 6143 -20 22 35 0 0 chr5 133290135 133290164 -69795368 + AT_rich Low_complexity Low_complexity 1 29 0 286 256 12 0 chr5 133290218 133290300 -69795232 - L1ME LINE L1 -508 5613 5531 26 64 0 0 chr5 133290300 133290347 -69795185 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr5 133290724 133290753 -69794779 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 133291717 133291741 -69793791 + AT_rich Low_complexity Low_complexity 1 24 0 370 243 118 15 chr5 133292009 133292145 -69793387 + MIR SINE MIR 64 213 -49 1188 264 44 48 chr5 133292184 133292645 -69792887 + MLT1F LTR MaLR 8 546 -21 22 0 0 0 chr5 133293202 133293224 -69792308 + AT_rich Low_complexity Low_complexity 1 22 0 326 260 75 7 chr5 133294062 133294297 -69791235 - L1ME3A LINE L1 -9 6161 5850 1055 268 31 48 chr5 133294337 133295003 -69790529 - L1ME3A LINE L1 -514 5648 4993 2212 148 3 3 chr5 133295018 133295389 -69790143 - L1PB1 LINE L1 -1 6150 5780 263 139 0 76 chr5 133295390 133295562 -69789970 + (TA)n Simple_repeat Simple_repeat 1 159 0 250 163 43 33 chr5 133295564 133295656 -69789876 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 268 137 0 77 chr5 133295658 133295841 -69789691 + (TA)n Simple_repeat Simple_repeat 1 169 0 463 132 0 137 chr5 133295858 133296134 -69789398 + (CATATA)n Simple_repeat Simple_repeat 1 238 0 401 151 0 89 chr5 133296146 133296510 -69789022 + (TA)n Simple_repeat Simple_repeat 1 331 0 1613 86 0 0 chr5 133296534 133296755 -69788777 - L1PB1 LINE L1 -376 5775 5555 356 115 0 0 chr5 133296855 133296907 -69788625 - L1PB1 LINE L1 -619 5532 5481 * 4318 133 27 1 chr5 133296904 133297953 -69787579 + L1PA12 LINE L1 4849 5919 -249 752 281 86 3 chr5 133297972 133298346 -69787186 - L1M4 LINE L1 -3575 2571 2167 43 71 0 0 chr5 133299169 133299254 -69786278 + AT_rich Low_complexity Low_complexity 1 85 0 29 28 0 0 chr5 133301658 133301694 -69783838 + AT_rich Low_complexity Low_complexity 1 36 0 1928 141 7 3 chr5 133301972 133302276 -69783256 + AluSx SINE Alu 3 307 -5 208 266 47 16 chr5 133302298 133302362 -69783170 + MER5B DNA MER1_type 49 114 -64 701 262 18 0 chr5 133303164 133303328 -69782204 - MER45A DNA AcHobo 0 178 12 210 133 67 44 chr5 133306162 133306252 -69779280 + (TATAA)n Simple_repeat Simple_repeat 3 94 0 657 294 117 19 chr5 133306290 133306650 -69778882 - MLT1J2 LTR MaLR 0 450 56 433 254 99 99 chr5 133306720 133306922 -69778610 - L1MC/D LINE L1 -1989 5819 5618 2172 153 8 16 chr5 133306922 133307287 -69778245 - THE1B LTR MaLR -2 362 1 433 254 99 99 chr5 133307287 133307506 -69778026 - L1MC/D LINE L1 -2189 5619 5398 318 67 0 0 chr5 133308464 133308509 -69777023 + (TG)n Simple_repeat Simple_repeat 1 45 0 1495 188 7 24 chr5 133308994 133309281 -69776251 + AluJo SINE Alu 1 282 -30 1798 132 20 33 chr5 133309312 133309615 -69775917 + AluSx SINE Alu 1 299 -13 580 316 58 4 chr5 133310443 133310668 -69774864 + L2 LINE L2 2495 2731 -583 1745 230 113 0 chr5 133311377 133311811 -69773721 - MLT1E2 LTR MaLR -2 624 142 1792 84 133 8 chr5 133311975 133312238 -69773294 - AluSc SINE Alu -13 296 1 331 364 87 11 chr5 133313447 133313631 -69771901 - MIR SINE MIR -56 206 9 711 139 115 8 chr5 133314283 133314405 -69771127 + AluSq/x SINE Alu 1 135 -177 399 21 0 0 chr5 133314741 133314789 -69770743 + (TG)n Simple_repeat Simple_repeat 2 49 0 804 146 0 0 chr5 133314845 133314968 -69770564 - FLAM_A SINE Alu -4 138 16 26 74 0 0 chr5 133317399 133317453 -69768079 + AT_rich Low_complexity Low_complexity 1 54 0 1893 141 7 13 chr5 133318537 133318836 -69766696 + AluSx SINE Alu 1 297 -15 1422 188 99 3 chr5 133319661 133319975 -69765557 + MER2 DNA MER2_type 1 344 0 1793 14 14 0 chr5 133320283 133320491 -69765041 + SVA Other Other 1176 1386 0 21 36 0 0 chr5 133320821 133320849 -69764683 + AT_rich Low_complexity Low_complexity 1 28 0 2255 122 30 14 chr5 133321752 133322121 -69763411 + THE1C LTR MaLR 1 375 0 189 121 0 0 chr5 133322146 133322179 -69763353 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 186 336 106 10 chr5 133322338 133322442 -69763090 + MIR SINE MIR 52 165 -97 704 268 121 80 chr5 133322525 133323179 -69762353 - L2 LINE L2 -1297 2017 1337 322 266 9 18 chr5 133323488 133323601 -69761931 - MIR SINE MIR -46 216 105 1966 151 6 6 chr5 133323763 133324075 -69761457 - AluSx SINE Alu 0 312 1 379 296 0 0 chr5 133324736 133324824 -69760708 - L2 LINE L2 -2 3311 3224 305 253 13 0 chr5 133324869 133324944 -69760588 - MLT1E2 LTR MaLR -466 76 1 1289 251 57 36 chr5 133325003 133325445 -69760087 - MLT1C LTR MaLR -10 457 7 282 410 53 0 chr5 133325473 133325661 -69759871 + L2 LINE L2 2862 3059 -213 22 0 0 0 chr5 133325753 133325775 -69759757 + AT_rich Low_complexity Low_complexity 1 22 0 288 309 77 43 chr5 133326719 133326952 -69758580 - L1M4 LINE L1 -2535 3611 3371 4448 172 15 13 chr5 133326954 133327745 -69757787 + MER54B LTR ERVL 1 793 0 1093 139 39 2 chr5 133328176 133328380 -69757152 - L1MB3 LINE L1 -298 5885 5676 208 280 140 28 chr5 133328650 133328757 -69756775 - MIR3 SINE MIR -5 203 85 682 291 64 43 chr5 133329269 133329595 -69755937 - L1MC4a LINE L1 -1962 5846 5514 598 217 72 14 chr5 133330988 133331126 -69754406 - AluJo SINE Alu -129 183 38 22 35 0 0 chr5 133331559 133331588 -69753944 + AT_rich Low_complexity Low_complexity 1 29 0 1579 254 75 27 chr5 133331658 133332205 -69753327 + MLT2B1 LTR ERVL 1 550 -4 467 270 41 51 chr5 133332805 133333001 -69752531 - MIR SINE MIR -46 216 23 648 99 0 0 chr5 133333218 133333309 -69752223 - AluY SINE Alu -16 295 205 34 65 0 0 chr5 133334427 133334489 -69751043 + AT_rich Low_complexity Low_complexity 1 62 0 2241 125 0 0 chr5 133334975 133335280 -69750252 + AluSx SINE Alu 1 305 -7 234 270 32 0 chr5 133337405 133337468 -69748064 - LTR50 LTR ERVL -717 78 14 400 247 57 44 chr5 133337492 133337548 -69747984 + MIR SINE MIR 93 147 -115 1920 110 92 0 chr5 133337548 133337829 -69747703 + AluSc SINE Alu 1 307 -2 400 247 57 44 chr5 133337829 133337930 -69747602 + MIR SINE MIR 147 252 -10 476 170 9 0 chr5 133338221 133338327 -69747205 + CT-rich Low_complexity Low_complexity 1 107 0 251 262 290 9 chr5 133339714 133339821 -69745711 - MIR SINE MIR -15 247 111 205 309 21 32 chr5 133340051 133340145 -69745387 + MER5A DNA MER1_type 63 155 -34 2062 180 83 11 chr5 133340428 133340861 -69744671 + MER88 LTR ERVL 1 464 0 2205 109 0 3 chr5 133340883 133341195 -69744337 - AluSx SINE Alu -1 311 1 730 230 21 16 chr5 133341639 133341826 -69743706 - MIR SINE MIR -71 191 4 24 0 0 0 chr5 133342084 133342108 -69743424 + AT_rich Low_complexity Low_complexity 1 24 0 414 231 67 30 chr5 133342425 133342559 -69742973 + MER5A DNA MER1_type 48 186 -3 21 36 0 0 chr5 133343641 133343669 -69741863 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 133345100 133345152 -69740380 + AT_rich Low_complexity Low_complexity 1 52 0 21 36 0 0 chr5 133345206 133345234 -69740298 + AT_rich Low_complexity Low_complexity 1 28 0 247 272 78 0 chr5 133346232 133346335 -69739197 + MLT1L LTR MaLR 496 606 -9 452 346 105 20 chr5 133346348 133346643 -69738889 + MLT1K LTR MaLR 18 337 -251 339 276 32 0 chr5 133347299 133347422 -69738110 + CT-rich Low_complexity Low_complexity 2 128 0 13305 179 42 14 chr5 133347468 133348748 -69736784 - L1MA5 LINE L1 -299 6001 4758 261 0 0 0 chr5 133348748 133348777 -69736755 + (TTG)n Simple_repeat Simple_repeat 2 30 0 13305 179 42 14 chr5 133348777 133351119 -69734413 - L1MA5 LINE L1 -1542 4758 2264 183 344 67 11 chr5 133352183 133352273 -69733259 - L3b LINE CR1 -142 1441 1347 627 306 18 31 chr5 133352542 133352771 -69732761 + MIR SINE MIR 23 248 -14 605 345 78 35 chr5 133353032 133353870 -69731662 - L1MEc LINE L1 -5486 910 37 529 166 11 44 chr5 133354349 133354530 -69731002 + CT-rich Low_complexity Low_complexity 2 176 0 1461 194 61 0 chr5 133354560 133355033 -69730499 - AluJb SINE Alu 0 491 1 245 349 0 0 chr5 133355469 133355535 -69729997 + MIR SINE MIR 82 147 -61 389 316 18 0 chr5 133355857 133355971 -69729561 - MLT1H1 LTR MaLR -9 546 431 341 257 37 9 chr5 133356592 133356701 -69728831 + MIR3 SINE MIR 97 208 0 2485 132 42 7 chr5 133356866 133356946 -69728586 + L1PB1 LINE L1 5703 5779 -372 351 0 0 0 chr5 133356946 133356985 -69728547 + (CA)n Simple_repeat Simple_repeat 2 40 0 2485 132 42 7 chr5 133356985 133357335 -69728197 + L1PB1 LINE L1 5779 6148 -3 2292 164 25 30 chr5 133357350 133357783 -69727749 - Tigger2a DNA MER2_type -3 431 1 2132 116 3 7 chr5 133357858 133358160 -69727372 + AluSx SINE Alu 1 301 -11 192 200 0 0 chr5 133358188 133358233 -69727299 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 1981 121 4 4 chr5 133358346 133358668 -69726864 - AluSg SINE Alu 0 322 1 21 71 0 0 chr5 133358807 133358849 -69726683 + AT_rich Low_complexity Low_complexity 1 42 0 1943 118 11 0 chr5 133360038 133360325 -69725207 - AluSq SINE Alu -21 292 3 21 0 0 0 chr5 133360844 133360865 -69724667 + AT_rich Low_complexity Low_complexity 1 21 0 1669 161 140 48 chr5 133361186 133361359 -69724173 + MSTA LTR MaLR 1 157 -271 2244 116 0 0 chr5 133361359 133361660 -69723872 + AluSg SINE Alu 1 301 -9 1669 161 140 48 chr5 133361660 133361878 -69723654 + MSTA LTR MaLR 157 428 0 7998 205 25 6 chr5 133361878 133363499 -69722033 + MSTA-int LTR MaLR 1 1651 0 1838 168 128 13 chr5 133363501 133363883 -69721649 + MSTA LTR MaLR 3 428 0 215 293 57 47 chr5 133364492 133364598 -69720934 + MIR SINE MIR 99 205 -57 1488 248 61 46 chr5 133365013 133365407 -69720125 + L1MEc LINE L1 1914 2296 -3919 10631 47 3 0 chr5 133365407 133367491 -69718041 + L1PA5 LINE L1 4058 6148 -6 1488 248 61 46 chr5 133367491 133367777 -69717755 + L1MEc LINE L1 2296 2576 -3639 395 229 57 117 chr5 133367788 133368172 -69717360 + L1ME2 LINE L1 5803 6163 -1 265 321 119 0 chr5 133368652 133368761 -69716771 - L2 LINE L2 -11 3261 3140 218 296 0 0 chr5 133370942 133370996 -69714536 - L2 LINE L2 0 3272 3219 2026 132 17 0 chr5 133371033 133371322 -69714210 + AluSx SINE Alu 1 294 -18 194 374 50 0 chr5 133371678 133371817 -69713715 - L2 LINE L2 -571 2743 2598 587 294 114 9 chr5 133372601 133372812 -69712720 - MIR SINE MIR 0 262 30 370 236 187 60 chr5 133372917 133373184 -69712348 - L1MC5 LINE L1 -36 7925 7625 311 252 180 14 chr5 133374065 133374204 -69711328 - MIR SINE MIR -7 255 94 43498 42 5 3 chr5 133374226 133374286 -69711246 - L1PA4 LINE L1 0 6155 6097 186 43 0 0 chr5 133374286 133374309 -69711223 + (TA)n Simple_repeat Simple_repeat 2 24 0 43498 42 5 3 chr5 133374309 133380393 -69705139 - L1PA4 LINE L1 -58 6097 2 25 0 0 0 chr5 133380662 133380687 -69704845 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 133380789 133380813 -69704719 + AT_rich Low_complexity Low_complexity 1 24 0 328 287 19 6 chr5 133381275 133381416 -69704116 + (TA)n Simple_repeat Simple_repeat 2 147 -13 207 0 0 0 chr5 133381416 133381439 -69704093 + (TG)n Simple_repeat Simple_repeat 2 24 0 328 287 19 6 chr5 133381439 133381454 -69704078 + (TA)n Simple_repeat Simple_repeat 147 160 0 485 196 54 0 chr5 133382195 133382307 -69703225 + L1ME1 LINE L1 6034 6151 -15 2091 78 0 10 chr5 133382887 133383183 -69702349 - L1PA7 LINE L1 0 6154 5862 725 300 65 60 chr5 133383260 133383677 -69701855 + LTR16C LTR ERVL 73 491 0 271 271 0 0 chr5 133384146 133384205 -69701327 - L3b LINE CR1 -5 1578 1520 1132 266 92 49 chr5 133385188 133385741 -69699791 + L1MC4 LINE L1 7466 8042 0 1352 211 0 24 chr5 133385865 133386159 -69699373 - AluJb SINE Alu -23 289 3 186 43 0 0 chr5 133386457 133386480 -69699052 + (T)n Simple_repeat Simple_repeat 1 23 0 290 316 272 22 chr5 133388023 133388295 -69697237 + L2 LINE L2 2938 3277 -36 34 0 0 0 chr5 133390113 133390147 -69695385 + AT_rich Low_complexity Low_complexity 1 34 0 21 57 0 0 chr5 133390278 133390313 -69695219 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 133390349 133390380 -69695152 + AT_rich Low_complexity Low_complexity 1 31 0 842 254 182 0 chr5 133390492 133390838 -69694694 + L1ME1 LINE L1 5753 6161 -5 22 0 0 0 chr5 133391064 133391086 -69694446 + AT_rich Low_complexity Low_complexity 1 22 0 324 315 37 0 chr5 133391116 133391224 -69694308 + LTR33 LTR ERVL 4 115 -406 242 287 58 11 chr5 133391464 133391551 -69693981 + LTR33 LTR ERVL 429 519 -2 616 170 9 0 chr5 133391868 133391980 -69693552 - MSTA LTR MaLR -315 113 1 8364 150 14 62 chr5 133391980 133393637 -69691895 - MSTA-int LTR MaLR 0 1580 3 1623 180 156 8 chr5 133393639 133394012 -69691520 - MSTA LTR MaLR 0 428 1 244 255 236 28 chr5 133394044 133394150 -69691382 - MIR3 SINE MIR -45 163 36 1015 406 0 32 chr5 133394451 133394729 -69690803 + L1PA13 LINE L1 5894 6162 -1 210 105 0 0 chr5 133394733 133394771 -69690761 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 10397 54 44 26 chr5 133394771 133396131 -69689401 + SVA Other Other 1 1385 -1 227 54 27 0 chr5 133396139 133396176 -69689356 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 621 164 36 7 chr5 133396617 133396755 -69688777 + MER69A DNA AcHobo 1 142 -35 22 70 0 0 chr5 133396950 133396993 -69688539 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr5 133397033 133397059 -69688473 + AT_rich Low_complexity Low_complexity 1 26 0 1707 110 4 0 chr5 133397062 133397307 -69688225 + L1PA13 LINE L1 5904 6149 -14 307 290 0 0 chr5 133399751 133399820 -69685712 - L2 LINE L2 0 3313 3245 3709 189 37 3 chr5 133399900 133400608 -69684924 + MER44D DNA MER2_type 2 605 0 236 377 27 27 chr5 133401242 133401388 -69684144 + MIR SINE MIR 15 160 -102 256 135 0 39 chr5 133402607 133402659 -69682873 - L1MA10 LINE L1 -2 6332 6283 2367 86 0 7 chr5 133402688 133402989 -69682543 + AluSg SINE Alu 1 299 -11 411 213 111 0 chr5 133402991 133403099 -69682433 - L1MA8 LINE L1 -6 6285 6166 418 151 11 86 chr5 133403103 133403196 -69682336 - L1MA10 LINE L1 -46 6288 6203 3146 173 14 7 chr5 133403253 133403824 -69681708 - L1MB1 LINE L1 -4 6185 5611 1561 195 10 0 chr5 133403821 133404124 -69681408 + L1M3 LINE L1 4788 5093 -1053 * 336 145 0 32 chr5 133404123 133404185 -69681347 + L1M3 LINE L1 5538 5597 -737 * 663 257 22 11 chr5 133404970 133405153 -69680379 - MLT1J2 LTR MaLR -245 205 21 236 287 103 11 chr5 133405665 133405752 -69679780 + L2 LINE L2 3160 3254 -18 22 0 0 0 chr5 133406467 133406489 -69679043 + AT_rich Low_complexity Low_complexity 1 22 0 1260 178 140 4 chr5 133408229 133408351 -69677181 + AluJo SINE Alu 1 105 -197 477 0 0 0 chr5 133408351 133408404 -69677128 + (TAA)n Simple_repeat Simple_repeat 2 54 0 1260 178 140 4 chr5 133408404 133408545 -69676987 + AluJo SINE Alu 105 300 -2 201 171 0 0 chr5 133409008 133409043 -69676489 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 247 227 15 0 chr5 133410058 133410124 -69675408 + (TA)n Simple_repeat Simple_repeat 1 67 0 359 273 93 25 chr5 133413111 133413272 -69672260 + MIR3 SINE MIR 14 185 -23 421 354 49 33 chr5 133414251 133414598 -69670934 + L2 LINE L2 2684 3033 -280 225 234 66 6 chr5 133414839 133415006 -69670526 + (TA)n Simple_repeat Simple_repeat 1 177 0 5884 205 36 11 chr5 133415037 133417447 -69668085 - L1MC1 LINE L1 -199 6134 3666 252 0 0 0 chr5 133417570 133417598 -69667934 + (CA)n Simple_repeat Simple_repeat 2 29 0 1685 205 184 31 chr5 133417787 133418358 -69667174 - L1MC3 LINE L1 0 7785 7128 * 4842 217 43 28 chr5 133418356 133419816 -69665716 - L1M4 LINE L1 -1042 5104 3623 517 349 77 27 chr5 133419835 133420274 -69665258 - L2 LINE L2 -650 2664 2103 21 0 0 0 chr5 133420352 133420373 -69665159 + AT_rich Low_complexity Low_complexity 1 21 0 15691 160 50 13 chr5 133420399 133423212 -69662320 + L1MA1 LINE L1 243 3159 -4406 803 194 60 0 chr5 133423258 133423459 -69662073 + L1MA1 LINE L1 3087 3299 -4266 * 43306 42 5 1 chr5 133423444 133429571 -69655961 - L1PA3 LINE L1 -2 6153 4 13795 165 17 46 chr5 133429577 133431555 -69653977 + L1MA1 LINE L1 3262 5296 -2425 1634 93 0 0 chr5 133431555 133431780 -69653752 - L1PA5 LINE L1 0 6154 5930 13795 165 17 46 chr5 133431780 133434397 -69651135 + L1MA1 LINE L1 5296 7719 -2 402 189 232 0 chr5 133437387 133437482 -69648050 + MER63 DNA MER1_type 3 745 -317 300 243 14 0 chr5 133437489 133437559 -69647973 + MER63 DNA MER1_type 978 1048 -13 436 250 151 28 chr5 133437900 133438112 -69647420 + L2 LINE L2 3075 3312 -1 585 297 5 2 chr5 133438688 133438890 -69646642 + MIR SINE MIR 15 262 0 1869 180 17 44 chr5 133439080 133439485 -69646047 + MLT2C1 LTR ERVL 3 396 -1 1078 143 11 0 chr5 133439486 133439661 -69645871 + MLT1-int LTR MaLR 1 177 -1194 1191 211 36 20 chr5 133439665 133439916 -69645616 + MLT1C LTR MaLR 208 462 -5 27 29 0 0 chr5 133440614 133440648 -69644884 + AT_rich Low_complexity Low_complexity 1 34 0 376 302 94 52 chr5 133441152 133441344 -69644188 - MIR SINE MIR -15 247 48 190 279 49 0 chr5 133441345 133441406 -69644126 + MIR SINE MIR 114 177 -85 3454 104 0 61 chr5 133441830 133442265 -69643267 + L1P LINE L1 2125 2518 -3628 6701 48 1 1 chr5 133442265 133443050 -69642482 - LTR5 LTR ERVK -184 785 1 3454 104 0 61 chr5 133443050 133443191 -69642341 + L1P LINE L1 2518 2666 -3480 252 266 144 29 chr5 133446692 133446865 -69638667 + MLT1J LTR MaLR 1 159 -291 340 282 0 0 chr5 133447027 133447105 -69638427 + MLT1J LTR MaLR 342 419 -92 670 219 80 0 chr5 133447226 133447377 -69638155 + MER5B DNA MER1_type 1 163 -15 2112 134 3 0 chr5 133448188 133448487 -69637045 + AluSx SINE Alu 1 300 -12 416 213 0 0 chr5 133448854 133448934 -69636598 - MER82 DNA MER2_type -1 652 573 * 1384 203 35 0 chr5 133448933 133449223 -69636309 - MER82 DNA MER2_type -352 301 2 487 298 72 45 chr5 133449271 133449536 -69635996 + LTR16A1 LTR ERVL 186 457 0 418 339 84 25 chr5 133449610 133449849 -69635683 - MIR SINE MIR 0 262 10 384 293 127 59 chr5 133450032 133450511 -69635021 + L2 LINE L2 2763 3313 0 200 227 23 0 chr5 133450964 133451008 -69634524 + (TG)n Simple_repeat Simple_repeat 2 46 0 1049 276 76 33 chr5 133451905 133452145 -69633387 - LTR33 LTR ERVL -3 518 290 2324 94 48 14 chr5 133452145 133452497 -69633035 - THE1B LTR MaLR 0 364 1 1049 276 76 33 chr5 133452497 133452689 -69632843 - LTR33 LTR ERVL -231 290 67 647 193 140 0 chr5 133452689 133452860 -69632672 + MER96B DNA MER1_type? 4 198 -219 563 294 34 0 chr5 133453055 133453201 -69632331 + MER45A DNA AcHobo 28 178 0 2191 170 62 27 chr5 133453253 133453736 -69631796 - L1MD1 LINE L1 0 6242 5743 445 213 71 71 chr5 133453731 133453900 -69631632 - L1MDb LINE L1 -5374 1169 1001 * 633 319 72 14 chr5 133454169 133454517 -69631015 - L1MDb LINE L1 -6123 417 50 189 0 0 0 chr5 133454917 133454938 -69630594 + (T)n Simple_repeat Simple_repeat 1 21 0 1328 232 24 68 chr5 133455913 133456296 -69629236 + MLT1A2 LTR MaLR 1 366 -8 1441 177 25 57 chr5 133456513 133456830 -69628702 + AluJo SINE Alu 1 307 -5 1912 185 29 29 chr5 133456916 133457451 -69628081 - MLT2A2 LTR ERVL 0 554 20 38157 106 22 10 chr5 133457470 133457949 -69627583 - HERVL-A2-A2 LTR ERVL -174 5480 5009 2136 103 7 3 chr5 133457949 133458239 -69627293 - AluSc SINE Alu -18 291 1 38157 106 22 10 chr5 133458239 133460925 -69624607 - HERVL-A2-A2 LTR ERVL -645 5009 2358 378 0 0 0 chr5 133460925 133460967 -69624565 + (CA)n Simple_repeat Simple_repeat 2 43 0 38157 106 22 10 chr5 133460967 133462798 -69622734 - HERVL-A2-A2 LTR ERVL -3296 2358 407 1469 111 0 0 chr5 133462798 133462988 -69622544 + AluSx SINE Alu 61 250 -62 38157 106 22 10 chr5 133462988 133463401 -69622131 - HERVL-A2-A2 LTR ERVL -5247 407 1 2120 171 24 39 chr5 133463401 133463971 -69621561 - MLT2A2 LTR ERVL 0 554 1 210 143 0 0 chr5 133464261 133464296 -69621236 + (CAT)n Simple_repeat Simple_repeat 2 36 0 2076 194 19 26 chr5 133464296 133464719 -69620813 + MSTB1 LTR MaLR 1 420 -12 24 0 0 0 chr5 133465157 133465181 -69620351 + AT_rich Low_complexity Low_complexity 1 24 0 887 126 0 7 chr5 133465274 133465417 -69620115 - L1PBb LINE L1 -5273 931 790 344 180 2 0 chr5 133465415 133465487 -69620045 + L1PBa LINE L1 2809 2881 -3982 * 395 383 29 29 chr5 133465560 133465803 -69619729 - L2 LINE L2 -2841 473 231 412 297 47 78 chr5 133466495 133466751 -69618781 - MIR SINE MIR -2 260 13 714 274 23 23 chr5 133466986 133467161 -69618371 + MER45A DNA AcHobo 4 178 0 372 155 0 0 chr5 133468088 133468159 -69617373 + CT-rich Low_complexity Low_complexity 1 71 0 3664 157 65 27 chr5 133468159 133468900 -69616632 - L1PB4 LINE L1 -13 6143 5375 1434 222 29 2 chr5 133468900 133469292 -69616240 + L1P LINE L1 4970 5369 -791 292 281 0 0 chr5 133469666 133469730 -69615802 + L2 LINE L2 3229 3292 -21 194 133 0 0 chr5 133469796 133469826 -69615706 - L2 LINE L2 -17 3296 3267 22 70 0 0 chr5 133469969 133470012 -69615520 + AT_rich Low_complexity Low_complexity 1 43 0 480 214 58 35 chr5 133470634 133470807 -69614725 - L1MC3 LINE L1 -108 7677 7501 1269 146 5 0 chr5 133470807 133470999 -69614533 + THE1C LTR MaLR 181 373 -2 525 201 13 28 chr5 133471002 133471220 -69614312 - L1MC3 LINE L1 -459 5885 5777 * 1277 145 18 0 chr5 133471214 133471442 -69614090 + L1PA13 LINE L1 1979 2210 -4577 * 18310 183 41 27 chr5 133471438 133471537 -69613995 - L1 LINE L1 -2356 5209 5113 477 0 0 0 chr5 133471537 133471590 -69613942 + (TG)n Simple_repeat Simple_repeat 2 54 0 18310 183 41 27 chr5 133471590 133472584 -69612948 - L1 LINE L1 -2452 5113 4134 2039 108 4 0 chr5 133472584 133472862 -69612670 - AluY SINE Alu -12 299 21 18310 183 41 27 chr5 133472862 133472956 -69612576 - L1 LINE L1 -3431 4134 4043 2445 125 22 3 chr5 133472956 133473324 -69612208 - THE1C LTR MaLR 0 375 1 18310 183 41 27 chr5 133473324 133474256 -69611276 - L1 LINE L1 -3522 4043 3125 1564 185 8 0 chr5 133474256 133474516 -69611016 + AluJb SINE Alu 4 265 -47 18310 183 41 27 chr5 133474516 133477511 -69608021 - L1 LINE L1 -4440 3125 22 2346 245 40 103 chr5 133477522 133478827 -69606705 - L1MCa LINE L1 -1887 4539 3317 9465 187 17 19 chr5 133478828 133481649 -69603883 - L1PA13 LINE L1 -9 6805 3982 7548 208 39 8 chr5 133481651 133484061 -69601471 - L1PA13 LINE L1 -2875 3922 1253 1336 208 114 49 chr5 133484052 133484620 -69600912 - L1MCa LINE L1 -4458 1968 1364 * 22 0 0 0 chr5 133484655 133484677 -69600855 + AT_rich Low_complexity Low_complexity 1 22 0 2289 92 3 0 chr5 133484781 133485073 -69600459 + AluSp SINE Alu 2 294 -19 232 286 0 16 chr5 133485218 133485281 -69600251 + CT-rich Low_complexity Low_complexity 3 64 0 588 281 39 0 chr5 133485436 133485614 -69599918 + MER5A DNA MER1_type 2 186 -3 307 231 107 74 chr5 133486427 133486548 -69598984 + L1MCa LINE L1 402 490 -5555 370 273 116 32 chr5 133486788 133487004 -69598528 + L1MCa LINE L1 995 1228 -5326 * 1570 246 59 23 chr5 133487003 133487701 -69597831 + L1M4 LINE L1 2993 3715 -2431 21 89 0 0 chr5 133487777 133487833 -69597699 + AT_rich Low_complexity Low_complexity 1 56 0 264 324 153 0 chr5 133487913 133488024 -69597508 - MIR SINE MIR -122 140 13 229 364 77 18 chr5 133488234 133488454 -69597078 - L1MCa LINE L1 -5555 861 629 268 245 10 10 chr5 133489658 133489760 -69595772 + CT-rich Low_complexity Low_complexity 4 105 0 404 292 66 78 chr5 133489884 133490141 -69595391 - MLT1J LTR MaLR -11 500 247 1554 186 0 32 chr5 133490362 133490674 -69594858 - AluJb SINE Alu -2 310 9 21 0 0 0 chr5 133490727 133490748 -69594784 + AT_rich Low_complexity Low_complexity 1 21 0 231 163 0 20 chr5 133491248 133491297 -69594235 + L1MC4 LINE L1 6656 6703 -1339 349 342 109 22 chr5 133491669 133491991 -69593541 - LTR16A LTR ERVL -6 444 95 280 230 40 56 chr5 133492585 133492711 -69592821 + MLT2E LTR ERVL 505 628 0 2070 154 51 63 chr5 133492736 133493165 -69592367 + MSTA LTR MaLR 5 428 0 2198 102 0 0 chr5 133493988 133494282 -69591250 - AluY SINE Alu -17 294 1 408 281 186 29 chr5 133494324 133494733 -69590799 + L1MEd LINE L1 512 984 -5221 390 283 76 24 chr5 133494792 133495082 -69590450 + L1MEd LINE L1 1247 1551 -4845 723 142 50 0 chr5 133495121 133495262 -69590270 - L1MA8 LINE L1 -5 6286 6139 336 323 123 25 chr5 133495283 133495568 -69589964 + L1MEd LINE L1 1571 1883 -4513 34 0 0 0 chr5 133495707 133495741 -69589791 + AT_rich Low_complexity Low_complexity 1 34 0 489 288 138 33 chr5 133496274 133497114 -69588418 + L1MEd LINE L1 2628 3555 -2660 317 377 33 16 chr5 133497599 133497782 -69587750 - L2 LINE L2 -569 2745 2560 21 36 0 0 chr5 133499310 133499338 -69586194 + AT_rich Low_complexity Low_complexity 1 28 0 358 330 62 22 chr5 133499605 133499784 -69585748 - MIR SINE MIR -30 232 47 22 56 0 0 chr5 133501123 133501159 -69584373 + AT_rich Low_complexity Low_complexity 1 36 0 396 342 69 46 chr5 133503495 133503884 -69581648 - L1 LINE L1 -2679 3467 3070 249 329 84 38 chr5 133503912 133504542 -69580990 - L1 LINE L1 -3149 2997 2339 304 253 42 63 chr5 133504896 133504991 -69580541 - HAL1 LINE L1 -1269 1238 1146 493 311 101 17 chr5 133507172 133507468 -69578064 + MLT1J2 LTR MaLR 62 382 -68 24 32 0 0 chr5 133507729 133507760 -69577772 + AT_rich Low_complexity Low_complexity 1 31 0 2821 247 60 18 chr5 133507783 133508496 -69577036 - L1M4b LINE L1 -6104 755 13 23 0 0 0 chr5 133509426 133509449 -69576083 + AT_rich Low_complexity Low_complexity 1 23 0 369 0 0 0 chr5 133509952 133509993 -69575539 + (TG)n Simple_repeat Simple_repeat 2 42 0 3849 214 71 19 chr5 133510213 133510964 -69574568 + L1MC3 LINE L1 5873 6684 -1101 507 33 0 0 chr5 133510964 133511025 -69574507 + (CA)n Simple_repeat Simple_repeat 2 62 0 3849 214 71 19 chr5 133511025 133511211 -69574321 + L1MC3 LINE L1 6684 6859 -926 748 308 88 42 chr5 133512301 133512655 -69572877 + LTR16C LTR ERVL 22 391 -100 24 0 0 0 chr5 133512794 133512818 -69572714 + AT_rich Low_complexity Low_complexity 1 24 0 607 279 44 44 chr5 133513713 133513964 -69571568 - MLT1K LTR MaLR -15 573 323 514 341 108 19 chr5 133514345 133514773 -69570759 - L2 LINE L2 -396 2918 2453 329 291 118 0 chr5 133514782 133514909 -69570623 - MIR SINE MIR -73 189 48 639 275 60 0 chr5 133514953 133515120 -69570412 + MER8 DNA MER2_type 1 177 -62 297 237 0 0 chr5 133515165 133515224 -69570308 + MER8 DNA MER2_type 181 239 0 9346 183 48 44 chr5 133515229 133515770 -69569762 - Ricksha_c DNA DNA -1208 2046 1509 2098 128 0 3 chr5 133515770 133516076 -69569456 - AluSx SINE Alu -7 305 1 9346 183 48 44 chr5 133516076 133516825 -69568707 - Ricksha_c DNA DNA -1745 1509 764 551 39 26 0 chr5 133516825 133516902 -69568630 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 9346 183 48 44 chr5 133516902 133517641 -69567891 - Ricksha_c DNA DNA -2490 764 8 359 179 0 13 chr5 133519901 133519979 -69565553 + GA-rich Low_complexity Low_complexity 3 79 0 5239 73 3 4 chr5 133520238 133520932 -69564600 - L1PA7 LINE L1 -3 6151 5459 8494 104 25 8 chr5 133520932 133521976 -69563556 + L1P LINE L1 2447 3520 -2626 213 39 0 0 chr5 133521976 133522002 -69563530 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8494 104 25 8 chr5 133522002 133522258 -69563274 + L1P LINE L1 3520 3770 -2376 32 75 0 0 chr5 133572709 133572776 -69512756 + AT_rich Low_complexity Low_complexity 1 67 0 2639 231 43 21 chr5 133572893 133573520 -69512012 - MER82 DNA MER2_type 0 653 13 326 188 16 0 chr5 133573918 133573982 -69511550 + L1MCa LINE L1 1540 1604 -4822 781 263 86 10 chr5 133573991 133574284 -69511248 + L1M4 LINE L1 4045 4363 -1783 2045 113 3 26 chr5 133574284 133574623 -69510909 - AluSc SINE Alu 0 309 1 455 240 29 29 chr5 133574643 133574747 -69510785 - FLAM_A SINE Alu -38 104 1 758 275 8 0 chr5 133574760 133575004 -69510528 + L1M4 LINE L1 4363 4608 -1538 2435 192 60 45 chr5 133575014 133575634 -69509898 + L1MC2 LINE L1 5714 6342 -2 210 269 51 26 chr5 133576058 133576136 -69509396 + MIR SINE MIR 173 252 -10 3606 21 0 0 chr5 133577348 133577774 -69507758 - L1PA4 LINE L1 -913 5233 4808 7101 41 9 15 chr5 133577788 133578696 -69506836 + L1PA4 LINE L1 5254 6155 0 844 257 17 0 chr5 133579696 133579875 -69505657 - MER5A DNA MER1_type -1 188 7 303 299 24 39 chr5 133581714 133581841 -69503691 + L2 LINE L2 3117 3241 -72 180 77 0 0 chr5 133581865 133581891 -69503641 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 259 294 29 0 chr5 133582157 133582225 -69503307 + MIR SINE MIR 74 143 -65 433 258 32 0 chr5 133582411 133582535 -69502997 - L1ME3A LINE L1 -192 5978 5851 992 146 16 26 chr5 133582577 133582637 -69502895 - L1PB4 LINE L1 -79 6077 6018 1781 114 59 31 chr5 133582637 133582927 -69502605 + AluSx SINE Alu 1 298 -14 992 146 16 26 chr5 133582927 133583058 -69502474 - L1PB4 LINE L1 -138 6018 5888 22 0 0 0 chr5 133583105 133583127 -69502405 + AT_rich Low_complexity Low_complexity 1 22 0 558 231 0 0 chr5 133583211 133583332 -69502200 - Charlie1 DNA MER1_type -21 2740 2620 * 680 251 35 0 chr5 133583326 133583497 -69502035 - Charlie1 DNA MER1_type -2534 227 51 936 227 52 12 chr5 133583591 133583993 -69501539 + MLT1F LTR MaLR 73 535 -7 461 311 23 19 chr5 133584493 133584757 -69500775 - L1MEc LINE L1 -4580 1816 1552 19325 26 0 0 chr5 133584803 133587877 -69497655 - L1PA3 LINE L1 -5 6150 3076 22 0 0 0 chr5 133588767 133588789 -69496743 + AT_rich Low_complexity Low_complexity 1 22 0 723 311 105 61 chr5 133590036 133590592 -69494940 + HAL1 LINE L1 822 1431 -1076 2109 116 57 25 chr5 133590592 133590945 -69494587 - THE1B LTR MaLR 0 364 1 723 311 105 61 chr5 133590945 133591267 -69494265 + HAL1 LINE L1 1431 1738 -769 26 50 0 0 chr5 133591904 133591944 -69493588 + AT_rich Low_complexity Low_complexity 1 40 0 581 283 81 35 chr5 133591949 133592388 -69493144 + L1MC/D LINE L1 5280 5732 -506 26 88 0 0 chr5 133592656 133592724 -69492808 + AT_rich Low_complexity Low_complexity 1 68 0 744 93 86 36 chr5 133593064 133593204 -69492328 - L1MA9 LINE L1 -1 6311 6165 187 103 51 0 chr5 133593222 133593261 -69492271 + CT-rich Low_complexity Low_complexity 4 44 0 4206 139 26 90 chr5 133593270 133594163 -69491369 - L1MA9 LINE L1 -157 6155 5320 354 179 154 0 chr5 133594917 133594995 -69490537 + L2 LINE L2 3223 3312 -1 23 54 0 0 chr5 133596026 133596063 -69489469 + AT_rich Low_complexity Low_complexity 1 37 0 621 281 86 40 chr5 133597060 133597338 -69488194 - MLT1H LTR MaLR -258 291 1 696 271 60 15 chr5 133597570 133597769 -69487763 - MIR SINE MIR -53 209 2 483 242 172 54 chr5 133598075 133598261 -69487271 + MIR SINE MIR 10 217 -45 2143 105 13 3 chr5 133598838 133599144 -69486388 + AluSx SINE Alu 1 309 -3 283 233 48 58 chr5 133599151 133599254 -69486278 + MIR SINE MIR 65 166 -96 22 0 0 54 chr5 133599767 133599784 -69485748 + AT_rich Low_complexity Low_complexity 1 17 -18 2927 155 20 11 chr5 133599784 133600327 -69485205 + L1MA6 LINE L1 5753 6300 0 22 0 0 54 chr5 133600327 133600346 -69485186 + AT_rich Low_complexity Low_complexity 17 35 0 1922 181 44 64 chr5 133600982 133601434 -69484098 + MSTB2 LTR MaLR 15 457 0 22 0 0 0 chr5 133601811 133601833 -69483699 + AT_rich Low_complexity Low_complexity 1 22 0 363 241 75 63 chr5 133603037 133603211 -69482321 - MER69A DNA AcHobo 0 177 2 2795 83 37 0 chr5 133603799 133604174 -69481358 - L1PA14 LINE L1 -209 5952 5564 1296 94 6 0 chr5 133604174 133604355 -69481177 + L1PA14 LINE L1 5973 6154 -7 22 35 0 0 chr5 133604761 133604790 -69480742 + AT_rich Low_complexity Low_complexity 1 29 0 2648 23 0 0 chr5 133605789 133606094 -69479438 - AluYa5 SINE Alu -6 305 1 2277 98 0 3 chr5 133606094 133606400 -69479132 - AluSq SINE Alu -8 305 1 1561 188 0 45 chr5 133607225 133607534 -69477998 - AluJo SINE Alu -17 295 1 21 0 0 0 chr5 133607536 133607557 -69477975 + AT_rich Low_complexity Low_complexity 1 21 0 432 0 0 0 chr5 133607820 133607868 -69477664 + (CA)n Simple_repeat Simple_repeat 2 49 0 304 216 7 34 chr5 133609118 133609266 -69476266 + CT-rich Low_complexity Low_complexity 4 147 0 201 376 44 40 chr5 133609891 133610117 -69475415 + L2 LINE L2 2595 2821 -493 486 238 19 147 chr5 133611023 133611198 -69474334 - L1MA8 LINE L1 -25 6266 6158 1977 123 4 0 chr5 133611198 133611508 -69474024 - AluSq SINE Alu 0 320 10 486 238 19 147 chr5 133611508 133611692 -69473840 - L1MA8 LINE L1 -133 6158 5952 * 898 286 82 40 chr5 133611631 133612221 -69473311 - L1MC4a LINE L1 -1759 6049 5426 437 238 29 9 chr5 133612221 133612326 -69473206 - U6 snRNA snRNA 0 107 1 898 286 82 40 chr5 133612326 133612404 -69473128 - L1MC4a LINE L1 -2382 5426 5353 301 298 76 26 chr5 133612888 133613190 -69472342 - L1MC4a LINE L1 -1303 4843 4527 21 0 0 0 chr5 133613355 133613376 -69472156 + AT_rich Low_complexity Low_complexity 1 21 0 218 31 0 31 chr5 133613965 133613997 -69471535 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 2511 45 6 13 chr5 133613997 133614310 -69471222 - AluY SINE Alu 0 311 1 691 366 148 24 chr5 133614314 133615138 -69470394 + L2 LINE L2 1982 2907 -407 229 57 0 0 chr5 133615286 133615321 -69470211 - L1MA3 LINE L1 0 6305 6271 24 77 0 0 chr5 133615817 133615869 -69469663 + AT_rich Low_complexity Low_complexity 1 52 0 2255 116 0 3 chr5 133615995 133616306 -69469226 + AluSx SINE Alu 1 310 -2 21 71 0 0 chr5 133616617 133616659 -69468873 + AT_rich Low_complexity Low_complexity 1 42 0 323 313 68 0 chr5 133616687 133616834 -69468698 + L1ME LINE L1 5509 5665 -456 2377 184 6 6 chr5 133616986 133617459 -69468073 + L1 LINE L1 4767 5239 -907 316 322 80 15 chr5 133617444 133617842 -69467690 + L1ME LINE L1 4741 5164 -982 * 264 250 19 29 chr5 133617847 133617951 -69467581 + L1ME LINE L1 5197 5299 -847 227 279 38 13 chr5 133618140 133618219 -69467313 + L1ME LINE L1 5531 5611 -553 6081 104 33 7 chr5 133618416 133619508 -69466024 + L1PA13 LINE L1 5051 6161 -2 414 0 0 0 chr5 133620504 133620550 -69464982 + (CA)n Simple_repeat Simple_repeat 1 46 0 1159 299 45 5 chr5 133620612 133620986 -69464546 - LTR16A LTR ERVL -61 389 1 2221 198 65 20 chr5 133621659 133622155 -69463377 + MLT2B1 LTR ERVL 3 520 0 2273 95 35 27 chr5 133623941 133624309 -69461223 - L1MA1 LINE L1 0 6302 5932 2240 110 0 3 chr5 133624824 133625134 -69460398 - AluSc SINE Alu 0 309 1 285 29 0 0 chr5 133625625 133625659 -69459873 + (CA)n Simple_repeat Simple_repeat 2 35 0 * 318 26 0 0 chr5 133625658 133625697 -69459835 + (TC)n Simple_repeat Simple_repeat 1 39 0 3066 113 53 8 chr5 133625720 133626209 -69459323 + MER9 LTR ERVK 1 511 0 180 0 0 0 chr5 133626736 133626756 -69458776 + (CA)n Simple_repeat Simple_repeat 2 21 0 197 176 22 22 chr5 133626780 133626871 -69458661 + (TA)n Simple_repeat Simple_repeat 1 91 0 1539 37 116 23 chr5 133627670 133627885 -69457647 + L1PA5 LINE L1 5912 6146 -8 22 0 0 0 chr5 133627885 133627907 -69457625 + AT_rich Low_complexity Low_complexity 1 22 0 1780 239 93 25 chr5 133627995 133629047 -69456485 - MER69 DNA AcHobo 0 2526 561 913 311 25 3 chr5 133629042 133629364 -69456168 - MER69 DNA AcHobo -2194 332 4 * 2538 223 57 28 chr5 133632146 133632832 -69452700 - L1ME3A LINE L1 -10 6160 5455 4797 144 92 81 chr5 133633177 133633266 -69452266 - Tigger3b DNA MER2_type -1797 1231 1144 2009 151 0 0 chr5 133633266 133633571 -69451961 - AluSg SINE Alu -5 305 1 4797 144 92 81 chr5 133633571 133634699 -69450833 - Tigger3b DNA MER2_type -1884 1144 1 393 218 105 24 chr5 133634782 133634906 -69450626 - MER94 DNA DNA 0 134 1 427 358 17 0 chr5 133636322 133636501 -69449031 + MIR SINE MIR 81 262 0 263 368 49 14 chr5 133636878 133637022 -69448510 + MIR SINE MIR 48 196 -66 398 272 0 0 chr5 133637676 133637757 -69447775 - L2 LINE L2 -1 3312 3232 484 317 117 23 chr5 133637806 133638051 -69447481 - L2 LINE L2 -279 3034 2759 6407 137 44 56 chr5 133638471 133638760 -69446772 + Tigger3b DNA MER2_type 1 292 -2736 1928 109 0 78 chr5 133638760 133639081 -69446451 - AluSx SINE Alu -16 296 1 6407 137 44 56 chr5 133639081 133639092 -69446440 + Tigger3b DNA MER2_type 292 302 -2726 582 203 102 0 chr5 133639092 133639210 -69446322 - FLAM_A SINE Alu -3 130 1 6407 137 44 56 chr5 133639210 133640154 -69445378 + Tigger3b DNA MER2_type 302 1231 0 599 260 170 31 chr5 133640211 133640532 -69445000 - MER76 LTR ERV -57 631 266 1580 174 36 0 chr5 133640532 133640808 -69444724 - LOR1b LTR ERV1 0 461 176 757 225 163 18 chr5 133640841 133641068 -69444464 - MER76 LTR ERV -428 260 1 26 30 0 0 chr5 133641647 133641680 -69443852 + AT_rich Low_complexity Low_complexity 1 33 0 30 0 0 0 chr5 133642231 133642261 -69443271 + AT_rich Low_complexity Low_complexity 1 30 0 5059 196 92 100 chr5 133642633 133644403 -69441129 + MER52A LTR ERV1 1 1755 0 3643 207 3 3 chr5 133644638 133645405 -69440127 - L1 LINE L1 -1292 4854 4088 194 327 0 18 chr5 133645407 133645462 -69440070 - MIR SINE MIR -135 73 20 26 0 0 0 chr5 133646045 133646071 -69439461 + AT_rich Low_complexity Low_complexity 1 26 0 1848 139 3 27 chr5 133646277 133646578 -69438954 + AluSx SINE Alu 19 312 0 388 283 42 17 chr5 133648431 133648551 -69436981 + L2 LINE L2 3150 3272 0 34 55 0 0 chr5 133650408 133650463 -69435069 + AT_rich Low_complexity Low_complexity 1 55 0 201 121 0 0 chr5 133650982 133651015 -69434517 + (TA)n Simple_repeat Simple_repeat 2 34 0 2138 171 10 3 chr5 133651614 133652000 -69433532 - MLT1B LTR MaLR 0 390 2 27 29 0 0 chr5 133652006 133652040 -69433492 + AT_rich Low_complexity Low_complexity 1 34 0 2213 141 8 19 chr5 133652082 133652450 -69433082 + THE1B LTR MaLR 1 364 0 9810 83 5 147 chr5 133652450 133654291 -69431241 + THE1B-int LTR MaLR 1 1580 0 2387 130 3 19 chr5 133654291 133654661 -69430871 + THE1B LTR MaLR 1 364 0 13669 150 20 12 chr5 133654662 133654860 -69430672 - Tigger1 DNA MER2_type 0 2418 2223 2365 69 0 33 chr5 133654860 133655164 -69430368 + AluY SINE Alu 1 294 -17 13669 150 20 12 chr5 133655164 133657308 -69428224 - Tigger1 DNA MER2_type -195 2223 56 23 0 0 0 chr5 133657455 133657478 -69428054 + AT_rich Low_complexity Low_complexity 1 23 0 1517 223 79 13 chr5 133657502 133657893 -69427639 + MER47B DNA MER2_type 2 418 0 180 134 15 45 chr5 133658539 133658606 -69426926 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 231 327 31 25 chr5 133658825 133658987 -69426545 - L1ME LINE L1 -454 5667 5505 312 309 17 20 chr5 133659176 133659351 -69426181 - MIR SINE MIR -4 258 29 300 27 0 0 chr5 133659526 133659563 -69425969 + (TC)n Simple_repeat Simple_repeat 2 38 0 1925 140 0 53 chr5 133659704 133660025 -69425507 - AluSx SINE Alu -8 304 1 308 303 95 29 chr5 133660104 133660345 -69425187 + HAL1 LINE L1 2245 2501 -6 2389 60 3 0 chr5 133661034 133661341 -69424191 - AluSp SINE Alu 0 308 1 1789 184 34 14 chr5 133661602 133661960 -69423572 - MLT1A1 LTR MaLR 0 365 1 1056 165 114 33 chr5 133661985 133662214 -69423318 - MLT1A1 LTR MaLR -117 248 1 728 302 8 16 chr5 133662226 133662474 -69423058 + LTR16B LTR ERVL 219 464 0 764 234 126 31 chr5 133663612 133663730 -69421802 + Charlie2 DNA MER1_type 2231 2336 -526 2038 112 35 3 chr5 133663730 133664017 -69421515 + AluSx SINE Alu 1 296 -16 764 234 126 31 chr5 133664017 133664448 -69421084 + Charlie2 DNA MER1_type 2336 2832 -30 1716 188 34 8 chr5 133664448 133664804 -69420728 - MLT1A1 LTR MaLR 0 365 1 857 83 8 0 chr5 133665072 133665193 -69420339 - L1MA1 LINE L1 0 6302 6181 414 349 124 30 chr5 133665450 133665909 -69419623 + L2 LINE L2 1819 2320 -994 1414 220 31 22 chr5 133666418 133666777 -69418755 + MLT1A1 LTR MaLR 4 365 0 202 310 17 0 chr5 133666823 133666881 -69418651 + L2 LINE L2 3251 3309 -4 258 341 30 30 chr5 133667756 133667891 -69417641 - MIR SINE MIR -108 154 20 821 270 38 4 chr5 133668044 133668415 -69417117 - LTR16C LTR ERVL 0 491 71 4478 174 22 27 chr5 133668521 133669783 -69415749 + L1MB1 LINE L1 4901 6160 -8 2509 117 6 3 chr5 133669808 133670167 -69415365 - THE1B LTR MaLR -4 360 1 252 299 69 0 chr5 133670457 133670544 -69414988 - LTR67 LTR ERVL -369 188 96 192 40 0 0 chr5 133670900 133670925 -69414607 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 453 351 65 25 chr5 133672703 133672948 -69412584 + L2 LINE L2 2566 2820 -494 2529 117 11 11 chr5 133673103 133673478 -69412054 + THE1C LTR MaLR 1 375 0 8943 129 57 39 chr5 133673478 133675030 -69410502 + THE1C-int LTR MaLR 1 1580 0 2743 103 0 5 chr5 133675030 133675407 -69410125 + THE1C LTR MaLR 1 375 0 23 54 0 0 chr5 133675614 133675651 -69409881 + AT_rich Low_complexity Low_complexity 1 37 0 5104 212 55 31 chr5 133675657 133675874 -69409658 + L1MB8 LINE L1 3750 3960 -2218 2294 93 0 13 chr5 133675874 133676175 -69409357 + AluY SINE Alu 1 297 -14 5104 212 55 31 chr5 133676175 133676381 -69409151 + L1MB8 LINE L1 3960 4159 -2019 1991 144 3 0 chr5 133676381 133676712 -69408820 + AluSx SINE Alu 1 332 0 5104 212 55 31 chr5 133676712 133678660 -69406872 + L1MB8 LINE L1 4159 6178 0 1630 247 26 13 chr5 133679349 133679738 -69405794 - MSTD LTR MaLR -2 394 1 21 36 0 0 chr5 133679832 133679860 -69405672 + AT_rich Low_complexity Low_complexity 1 28 0 203 377 88 18 chr5 133679937 133680051 -69405481 - L2 LINE L2 -1 3271 3150 2069 144 72 20 chr5 133680632 133680978 -69404554 + THE1B LTR MaLR 1 364 0 11331 110 8 0 chr5 133680978 133682546 -69402986 + THE1B-int LTR MaLR 1 1580 0 2098 130 72 20 chr5 133682546 133682892 -69402640 + THE1B LTR MaLR 1 364 0 858 350 62 53 chr5 133682948 133683707 -69401825 - HERVL LTR ERVL -862 4792 4027 252 143 0 0 chr5 133683892 133683934 -69401598 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 35 0 0 chr5 133684436 133684465 -69401067 + AT_rich Low_complexity Low_complexity 1 29 0 2688 26 3 0 chr5 133684585 133684893 -69400639 + AluY SINE Alu 1 309 -2 2240 146 8 13 chr5 133684935 133685312 -69400220 + THE1C LTR MaLR 1 375 0 3092 173 18 58 chr5 133685338 133685955 -69399577 + L1M1 LINE L1 9 600 -6965 1890 246 87 11 chr5 133686610 133687342 -69398190 - L1M4 LINE L1 -1224 4922 4135 242 200 0 0 chr5 133687349 133687404 -69398128 - L1M4 LINE L1 -2111 4035 3981 620 246 59 9 chr5 133687448 133687668 -69397864 - L1M4 LINE L1 -2243 3903 3673 27 0 0 0 chr5 133687684 133687711 -69397821 + AT_rich Low_complexity Low_complexity 1 27 0 5583 122 17 34 chr5 133688018 133688176 -69397356 + L1PA15 LINE L1 5228 5387 -778 1807 91 0 0 chr5 133688176 133688406 -69397126 + AluSg/x SINE Alu 80 309 -1 5583 122 17 34 chr5 133688406 133689181 -69396351 + L1PA15 LINE L1 5387 6146 -19 243 88 0 0 chr5 133689642 133689676 -69395856 + (CA)n Simple_repeat Simple_repeat 2 35 0 275 294 86 43 chr5 133690733 133690920 -69394612 - HERVL LTR ERVL -1039 4615 4421 273 237 0 14 chr5 133690955 133691021 -69394511 - HERVL LTR ERVL -1314 4340 4290 247 249 119 99 chr5 133693885 133694239 -69391293 - LTR52 LTR ERVL -58 363 3 4590 95 3 5 chr5 133694966 133695606 -69389926 - L1PA10 LINE L1 -2 6166 5528 235 116 93 0 chr5 133695609 133695652 -69389880 - L1PA10 LINE L1 -1149 4997 4951 1434 91 14 3 chr5 133695664 133695894 -69389638 - L1P4 LINE L1 -649 5519 5290 * 35259 39 18 2 chr5 133695881 133701906 -69383626 - L1PA3 LINE L1 0 6155 5 22171 183 10 16 chr5 133701908 133706721 -69378811 - L1P3 LINE L1 -812 5649 852 792 288 62 27 chr5 133706738 133707075 -69378457 - L1P3 LINE L1 -6096 365 17 681 163 115 108 chr5 133707089 133707377 -69378155 + MLT1A1 LTR MaLR 1 290 -75 4527 154 48 85 chr5 133707925 133709014 -69376518 + L1MC1 LINE L1 5268 6315 -18 269 247 120 20 chr5 133710210 133710360 -69375172 + MER103 DNA DNA 1 165 -1 415 332 125 33 chr5 133711184 133711488 -69374044 + HAL1 LINE L1 23 354 -2153 272 259 195 12 chr5 133711715 133711866 -69373666 - MER5A DNA MER1_type 0 189 7 391 267 136 45 chr5 133711894 133712163 -69373369 + HAL1 LINE L1 785 1028 -1479 2191 125 0 3 chr5 133712163 133712467 -69373065 + AluSx SINE Alu 1 303 -9 391 267 136 45 chr5 133712467 133712646 -69372886 + HAL1 LINE L1 1028 1274 -1233 2658 53 0 6 chr5 133712699 133713027 -69372505 + L1PA7 LINE L1 5819 6146 -8 1454 94 0 0 chr5 133713027 133713219 -69372313 + AluSg/x SINE Alu 121 312 0 27 0 0 0 chr5 133713399 133713426 -69372106 + AT_rich Low_complexity Low_complexity 1 27 0 402 21 0 0 chr5 133714015 133714062 -69371470 + (A)n Simple_repeat Simple_repeat 1 47 0 542 316 95 45 chr5 133714274 133715072 -69370460 + HAL1 LINE L1 1515 2352 -155 294 264 34 96 chr5 133715079 133715257 -69370275 + MER57A LTR ERV1 42 208 -195 21 36 0 0 chr5 133715434 133715462 -69370070 + AT_rich Low_complexity Low_complexity 1 28 0 1048 289 107 25 chr5 133715465 133715942 -69369590 - L1M4b LINE L1 -6331 528 13 199 263 50 12 chr5 133715942 133716022 -69369510 + MIR SINE MIR 62 144 -64 411 291 94 35 chr5 133716166 133716369 -69369163 - L2 LINE L2 0 3313 3099 517 154 7 28 chr5 133716538 133716681 -69368851 + (TA)n Simple_repeat Simple_repeat 2 141 0 24 0 0 0 chr5 133716980 133717004 -69368528 + AT_rich Low_complexity Low_complexity 1 24 0 200 240 60 0 chr5 133717142 133717192 -69368340 - L2 LINE L2 -86 3227 3175 709 202 104 0 chr5 133718843 133719026 -69366506 + MER3 DNA MER1_type 1 202 -7 4112 224 83 31 chr5 133719359 133720741 -69364791 + Charlie1a DNA MER1_type 1 1454 -1 602 220 170 45 chr5 133721182 133721382 -69364150 + MLT1A1 LTR MaLR 1 225 -140 666 261 97 48 chr5 133721651 133722003 -69363529 - LTR33A LTR ERVL -25 498 130 261 0 0 0 chr5 133722036 133722065 -69363467 + (A)n Simple_repeat Simple_repeat 1 29 0 206 306 28 0 chr5 133723053 133723125 -69362407 - MIR3 SINE MIR -25 183 110 533 271 61 28 chr5 133723207 133723421 -69362111 + MIR SINE MIR 21 241 -21 1939 124 0 7 chr5 133724142 133724442 -69361090 + AluSx SINE Alu 9 306 0 1364 214 27 54 chr5 133725519 133725892 -69359640 + MLT1A2 LTR MaLR 1 363 -11 401 246 123 0 chr5 133725905 133726027 -69359505 + LTR16A1 LTR ERVL 321 457 0 205 309 59 0 chr5 133726046 133726114 -69359418 - L2 LINE L2 -19 3253 3182 2660 178 40 8 chr5 133726433 133726939 -69358593 - MER52A LTR ERV1 0 1755 1234 1028 226 9 50 chr5 133726941 133727260 -69358272 - MER52A LTR ERV1 -1449 306 1 21 36 0 0 chr5 133728449 133728477 -69357055 + AT_rich Low_complexity Low_complexity 1 28 0 1852 168 14 0 chr5 133730524 133730816 -69354716 - AluSx SINE Alu -16 296 1 414 0 0 0 chr5 133731221 133731267 -69354265 + (CA)n Simple_repeat Simple_repeat 2 47 0 202 315 0 0 chr5 133731433 133731487 -69354045 + GA-rich Low_complexity Low_complexity 4 57 0 651 224 0 46 chr5 133732027 133732201 -69353331 - MLT1A2 LTR MaLR -208 166 1 6456 123 21 22 chr5 133733259 133734266 -69351266 - LTR13 LTR ERVK -1 1006 1 261 0 0 0 chr5 133734296 133734325 -69351207 + (TA)n Simple_repeat Simple_repeat 2 30 0 259 333 0 45 chr5 133734446 133734557 -69350975 - MER91B DNA MER1_type -1 189 84 266 247 41 27 chr5 133734573 133734646 -69350886 - MER91B DNA MER1_type -65 125 52 1575 217 46 3 chr5 133735072 133735418 -69350114 - MLT1A1 LTR MaLR -2 363 3 183 349 9 28 chr5 133735652 133735761 -69349771 - L2 LINE L2 0 3313 3207 544 239 153 6 chr5 133736108 133736271 -69349261 + MER5A DNA MER1_type 3 189 0 1820 111 13 29 chr5 133736345 133736651 -69348881 + THE1C LTR MaLR 1 301 -74 342 67 0 0 chr5 133736755 133736800 -69348732 + (CA)n Simple_repeat Simple_repeat 2 46 0 2246 114 0 0 chr5 133737605 133737903 -69347629 - AluSg1 SINE Alu -11 298 1 31 26 0 0 chr5 133738193 133738231 -69347301 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 133740316 133740337 -69345195 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr5 133741065 133741098 -69344434 + GC_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 133742785 133742809 -69342723 + AT_rich Low_complexity Low_complexity 1 24 0 256 366 49 24 chr5 133743380 133743503 -69342029 - L2 LINE L2 -8 3264 3139 1391 224 0 26 chr5 133744703 133745007 -69340525 - AluJb SINE Alu -16 296 1 329 272 51 13 chr5 133745675 133745833 -69339699 - L1ME4a LINE L1 -2 6119 5956 692 291 50 4 chr5 133746030 133746271 -69339261 - MIR SINE MIR -3 259 8 286 282 0 0 chr5 133746328 133746406 -69339126 - L1ME4a LINE L1 -518 5603 5526 622 302 83 21 chr5 133748740 133748982 -69336550 + MIR SINE MIR 4 260 -2 1171 274 75 50 chr5 133749014 133749590 -69335942 - L2 LINE L2 0 3313 2702 815 175 82 0 chr5 133749616 133749787 -69335745 - MER20 DNA MER1_type 0 219 35 222 37 0 0 chr5 133750403 133750430 -69335102 + (ATG)n Simple_repeat Simple_repeat 2 28 0 487 215 178 0 chr5 133750434 133750569 -69334963 - MIR SINE MIR -4 258 100 286 277 15 36 chr5 133750697 133750834 -69334698 + CT-rich Low_complexity Low_complexity 2 135 0 1468 198 4 0 chr5 133750868 133751131 -69334401 + AluJo SINE Alu 35 298 -14 542 275 22 11 chr5 133751138 133751320 -69334212 - L2 LINE L2 -15 3298 3115 2705 271 153 46 chr5 133751970 133753223 -69332309 + L2 LINE L2 1536 2922 -392 359 276 117 25 chr5 133753335 133753531 -69332001 + L2 LINE L2 3100 3313 0 209 320 77 0 chr5 133753840 133753918 -69331614 - MIR SINE MIR -3 259 176 25 31 0 0 chr5 133754903 133754935 -69330597 + AT_rich Low_complexity Low_complexity 1 32 0 643 171 18 0 chr5 133755492 133755603 -69329929 + AluSg/x SINE Alu 122 234 -78 21 36 0 0 chr5 133756283 133756311 -69329221 + AT_rich Low_complexity Low_complexity 1 28 0 1744 135 64 4 chr5 133756526 133756807 -69328725 - AluSx SINE Alu -14 298 1 3900 134 13 0 chr5 133757511 133758122 -69327410 - L1PA16 LINE L1 -9 6157 5539 473 240 45 28 chr5 133758385 133758572 -69326960 - MLT1I LTR MaLR -7 424 247 29 0 0 0 chr5 133759102 133759131 -69326401 + AT_rich Low_complexity Low_complexity 1 29 0 247 211 57 40 chr5 133759656 133759831 -69325701 + (TATATG)n Simple_repeat Simple_repeat 2 179 0 * 436 157 52 17 chr5 133759700 133760044 -69325488 + (TA)n Simple_repeat Simple_repeat 1 356 0 25 65 0 0 chr5 133760268 133760314 -69325218 + AT_rich Low_complexity Low_complexity 1 46 0 38442 42 2 1 chr5 133761026 133766574 -69318958 - L1PA4 LINE L1 0 6155 606 594 0 0 0 chr5 133766795 133766861 -69318671 + (TTTCC)n Simple_repeat Simple_repeat 2 67 0 183 80 0 0 chr5 133766861 133766886 -69318646 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 1954 152 0 9 chr5 133766906 133767221 -69318311 - AluSx SINE Alu 0 312 1 1190 227 54 14 chr5 133767456 133767633 -69317899 - AluJb SINE Alu -3 309 116 405 0 0 0 chr5 133767633 133767678 -69317854 + (TG)n Simple_repeat Simple_repeat 1 45 0 1190 227 54 14 chr5 133767678 133767778 -69317754 - AluJb SINE Alu -196 116 21 5059 121 15 1 chr5 133767956 133768747 -69316785 - L1PB2 LINE L1 -7 6144 5343 4501 195 22 2 chr5 133768829 133769722 -69315810 - L1MD1 LINE L1 0 6636 5726 479 155 12 0 chr5 133769722 133769806 -69315726 - FLAM SINE Alu -11 132 48 5095 210 81 115 chr5 133769806 133770707 -69314825 - L1MD1 LINE L1 -803 5737 4807 841 220 134 48 chr5 133770707 133770998 -69314534 + MER2 DNA MER2_type 6 321 -24 5095 210 81 115 chr5 133770998 133772762 -69312770 - L1MD1 LINE L1 -1733 4807 2984 2164 115 3 3 chr5 133772762 133773066 -69312466 - AluSg SINE Alu -6 304 1 5095 210 81 115 chr5 133773066 133774474 -69311058 - L1MD1 LINE L1 -3556 2984 1580 1586 87 0 30 chr5 133774474 133774705 -69310827 - AluSp SINE Alu -6 307 84 5095 210 81 115 chr5 133774705 133775245 -69310287 - L1MD1 LINE L1 -4960 1580 1023 806 282 11 45 chr5 133775246 133775858 -69309674 - L1MD1 LINE L1 -5883 657 21 22 88 0 0 chr5 133776247 133776304 -69309228 + AT_rich Low_complexity Low_complexity 1 57 0 195 42 0 0 chr5 133776788 133776812 -69308720 + (CA)n Simple_repeat Simple_repeat 2 25 0 2278 61 0 0 chr5 133777083 133777363 -69308169 + AluY SINE Alu 32 311 0 482 298 62 0 chr5 133777431 133777609 -69307923 + L1ME LINE L1 5534 5722 -399 30 45 0 0 chr5 133777714 133777758 -69307774 + AT_rich Low_complexity Low_complexity 1 44 0 235 250 142 95 chr5 133777957 133778077 -69307455 + MIR SINE MIR 14 121 -87 329 167 56 0 chr5 133778077 133778149 -69307383 - MER116 DNA Mariner -4 76 1 235 250 142 95 chr5 133778149 133778176 -69307356 + MIR SINE MIR 121 145 -63 3135 42 0 0 chr5 133779019 133779402 -69306130 - L1PA3 LINE L1 -3 6152 5770 1181 46 20 0 chr5 133779405 133779556 -69305976 - L1PA4 LINE L1 -1 6154 6001 229 286 0 0 chr5 133781215 133781264 -69304268 + (TATG)n Simple_repeat Simple_repeat 1 49 0 264 274 32 0 chr5 133781266 133781361 -69304171 + L1MC4 LINE L1 6612 6709 -1333 401 159 0 0 chr5 133781921 133781984 -69303548 - L1M1 LINE L1 -825 5480 5418 428 221 24 135 chr5 133781986 133782194 -69303338 - MLT1J LTR MaLR -97 414 230 22 0 0 0 chr5 133783038 133783060 -69302472 + AT_rich Low_complexity Low_complexity 1 22 0 369 260 67 110 chr5 133783295 133783641 -69301891 + MLT1J LTR MaLR 4 334 -177 467 294 58 71 chr5 133788061 133788611 -69296921 - MER41E LTR ERV1 -23 489 118 658 311 135 34 chr5 133788786 133789135 -69296397 + L2 LINE L2 2825 3230 -83 2285 93 0 3 chr5 133789135 133789435 -69296097 - AluSg SINE Alu -11 299 1 658 311 135 34 chr5 133789435 133789529 -69296003 + L2 LINE L2 3230 3313 0 3046 228 25 25 chr5 133789637 133790371 -69295161 - MSTD-int LTR MaLR -1000 735 2 1829 206 23 10 chr5 133790375 133790764 -69294768 - MSTD LTR MaLR -2 394 1 264 30 0 0 chr5 133791486 133791519 -69294013 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 2077 131 3 3 chr5 133791519 133791824 -69293708 + AluSx SINE Alu 1 305 -7 288 77 0 0 chr5 133791862 133791901 -69293631 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 133792590 133792622 -69292910 + AT_rich Low_complexity Low_complexity 1 32 0 208 222 111 42 chr5 133793197 133793269 -69292263 + MIR SINE MIR 42 118 -90 449 323 35 39 chr5 133793405 133793634 -69291898 + MIR SINE MIR 26 253 -9 943 285 45 59 chr5 133793959 133794313 -69291219 + MLT1J LTR MaLR 7 355 -156 21 36 0 0 chr5 133795105 133795133 -69290399 + AT_rich Low_complexity Low_complexity 1 28 0 238 355 13 0 chr5 133795147 133795223 -69290309 - L2 LINE L2 -36 3236 3160 2045 111 4 0 chr5 133795517 133795796 -69289736 + AluSx SINE Alu 27 306 -6 26 64 0 0 chr5 133796214 133796261 -69289271 + AT_rich Low_complexity Low_complexity 1 47 0 446 377 39 10 chr5 133796391 133796598 -69288934 - LTR16A LTR ERVL -121 329 117 1201 147 4 42 chr5 133796883 133797049 -69288483 - L1MA6 LINE L1 0 6300 6129 7265 51 0 5 chr5 133797049 133797999 -69287533 - L1PA5 LINE L1 0 6154 5206 2146 85 0 37 chr5 133797999 133798293 -69287239 - AluY SINE Alu -28 283 1 1201 147 4 42 chr5 133798293 133798363 -69287169 - L1MA6 LINE L1 -169 6131 6072 23 54 0 0 chr5 133798948 133798985 -69286547 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr5 133799070 133799099 -69286433 + AT_rich Low_complexity Low_complexity 1 29 0 417 293 60 0 chr5 133799442 133799575 -69285957 - MIR SINE MIR -104 158 18 2217 108 5 32 chr5 133799852 133800222 -69285310 + L1MA3 LINE L1 5946 6305 0 23 54 0 0 chr5 133800862 133800899 -69284633 + AT_rich Low_complexity Low_complexity 1 37 0 645 117 78 0 chr5 133802163 133802266 -69283266 - AluSc SINE Alu -198 111 1 1080 195 5 0 chr5 133802279 133802484 -69283048 - L1MB1 LINE L1 -51 6117 5912 1417 185 116 12 chr5 133802487 133802833 -69282699 - MER58D DNA MER1_type -1 385 4 257 192 41 14 chr5 133805520 133805593 -69279939 + (TA)n Simple_repeat Simple_repeat 2 76 0 309 117 0 0 chr5 133805632 133805692 -69279840 + (TA)n Simple_repeat Simple_repeat 2 61 0 22 0 0 0 chr5 133807158 133807180 -69278352 + AT_rich Low_complexity Low_complexity 1 22 0 1441 284 163 33 chr5 133808629 133809663 -69275869 - L2 LINE L2 -11 3302 2110 252 0 0 0 chr5 133810454 133810482 -69275050 + (TG)n Simple_repeat Simple_repeat 2 29 0 721 221 55 98 chr5 133810615 133810897 -69274635 - L1MD3 LINE L1 0 8042 7749 1845 168 10 0 chr5 133810897 133811195 -69274337 + AluSx SINE Alu 3 303 -9 856 131 0 29 chr5 133811198 133811335 -69274197 + FLAM_C SINE Alu 1 133 0 721 221 55 98 chr5 133811335 133811414 -69274118 - L1MD3 LINE L1 -295 7747 7706 226 280 0 0 chr5 133811817 133811867 -69273665 + LTR26B LTR ERV1 214 263 -268 2402 135 5 0 chr5 133812212 133812582 -69272950 + L1PA14 LINE L1 5785 6156 -5 2795 7 0 0 chr5 133813147 133813453 -69272079 - AluYa5 SINE Alu -5 306 1 51 53 0 46 chr5 133814603 133814734 -69270798 + AT_rich Low_complexity Low_complexity 1 125 0 910 164 6 6 chr5 133814897 133815062 -69270470 + L1PA15 LINE L1 6001 6165 0 29 0 0 0 chr5 133815515 133815544 -69269988 + AT_rich Low_complexity Low_complexity 1 29 0 213 347 42 53 chr5 133815832 133816022 -69269510 + L2 LINE L2 2827 3014 -258 997 31 79 0 chr5 133816027 133816154 -69269378 - MER85 DNA T2_type -2 137 1 2189 121 3 0 chr5 133816516 133816823 -69268709 - AluSx SINE Alu -4 308 1 1167 207 33 4 chr5 133817700 133817971 -69267561 - L1MD3 LINE L1 0 7995 7717 188 269 104 30 chr5 133818448 133818515 -69267017 - L3 LINE CR1 -1216 361 290 515 290 29 0 chr5 133819165 133819303 -69266229 + MIR3 SINE MIR 30 171 -37 610 317 90 31 chr5 133819468 133819790 -69265742 - MER102b DNA MER1_type 0 341 1 228 213 33 33 chr5 133819861 133819922 -69265610 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 573 167 105 18 chr5 133820093 133820207 -69265325 - FLAM_C SINE Alu -19 124 1 22 35 0 0 chr5 133820908 133820937 -69264595 + AT_rich Low_complexity Low_complexity 1 29 0 226 275 295 0 chr5 133821372 133821521 -69264011 - MIR SINE MIR -7 255 63 1108 234 91 39 chr5 133822110 133822560 -69262972 - MER66A LTR ERV1 0 598 173 192 77 0 0 chr5 133824344 133824370 -69261162 + (CA)n Simple_repeat Simple_repeat 2 27 0 973 219 97 17 chr5 133824514 133824752 -69260780 - AluJb SINE Alu -53 259 3 332 295 25 25 chr5 133825146 133825268 -69260264 - L2 LINE L2 0 3313 3192 1971 186 88 8 chr5 133826275 133826719 -69258813 - L1MA9 LINE L1 -6 6306 5831 416 290 48 14 chr5 133826730 133826875 -69258657 + MIR SINE MIR 29 178 -84 288 315 0 54 chr5 133828265 133828357 -69257175 + MIR SINE MIR 31 117 -91 343 330 121 29 chr5 133828475 133828681 -69256851 + L3 LINE CR1 247 471 -1106 276 329 50 31 chr5 133829322 133829483 -69256049 + L3 LINE CR1 595 758 -819 185 347 63 11 chr5 133829682 133829777 -69255755 + L3 LINE CR1 771 870 -707 205 384 12 0 chr5 133829989 133830075 -69255457 - MIR SINE MIR -6 256 170 1343 234 19 40 chr5 133830704 133830904 -69254628 - MLT1A2 LTR MaLR -7 367 177 201 39 0 0 chr5 133830904 133830930 -69254602 + (GA)n Simple_repeat Simple_repeat 1 26 0 1343 234 19 40 chr5 133830930 133831101 -69254431 - MLT1A2 LTR MaLR -197 177 4 361 310 127 0 chr5 133832079 133832221 -69253311 - MER91A DNA MER1_type -36 160 1 305 307 47 62 chr5 133832895 133833087 -69252445 + MIR3 SINE MIR 14 202 -6 14094 171 23 13 chr5 133833377 133837000 -69248532 - L1MA2 LINE L1 0 7723 4037 2033 150 11 8 chr5 133837000 133837354 -69248178 + THE1A LTR MaLR 1 355 0 14094 171 23 13 chr5 133837354 133838555 -69246977 - L1MA2 LINE L1 -3686 4037 2850 7933 199 32 29 chr5 133838557 133840082 -69245450 - L1MA2 LINE L1 -5879 1686 154 2353 88 0 0 chr5 133840082 133840387 -69245145 + AluY SINE Alu 1 305 -6 7933 199 32 29 chr5 133840387 133840531 -69245001 - L1MA2 LINE L1 -7411 154 12 1092 235 90 42 chr5 133841374 133841752 -69243780 + MSTD LTR MaLR 1 396 0 1994 139 134 11 chr5 133842889 133843270 -69242262 + MSTA LTR MaLR 1 428 0 244 308 53 45 chr5 133843612 133843745 -69241787 - MER5B DNA MER1_type -43 135 2 421 285 61 19 chr5 133845922 133846136 -69239396 + L1ME3A LINE L1 5638 5860 -310 316 270 66 41 chr5 133846287 133846483 -69239049 - L2 LINE L2 -128 3185 2985 1030 278 56 36 chr5 133846651 133847064 -69238468 - L2 LINE L2 -316 2997 2577 1131 278 28 110 chr5 133847069 133847669 -69237863 - MLT1H1 LTR MaLR -4 551 1 1564 318 84 14 chr5 133847674 133848400 -69237132 - L2 LINE L2 -749 2565 1789 193 143 20 20 chr5 133849247 133849296 -69236236 + (TA)n Simple_repeat Simple_repeat 2 50 0 1020 256 55 57 chr5 133849478 133849700 -69235832 + L1ME LINE L1 5135 5356 -814 1932 148 10 0 chr5 133849700 133849990 -69235542 + AluSx SINE Alu 1 293 -19 429 206 21 0 chr5 133849910 133850007 -69235525 + AluSg/x SINE Alu 209 307 -2 * 1020 256 55 57 chr5 133849990 133850300 -69235232 + L1ME LINE L1 5356 5667 -503 1214 205 128 0 chr5 133850300 133850597 -69234935 + MER44D DNA MER2_type 1 605 -4 1020 256 55 57 chr5 133850597 133850672 -69234860 + L1ME LINE L1 5667 5741 -429 * 2591 175 44 16 chr5 133850669 133850696 -69234836 + L1M2 LINE L1 3652 3677 -2469 324 0 0 0 chr5 133850696 133850732 -69234800 + (CA)n Simple_repeat Simple_repeat 2 37 0 2591 175 44 16 chr5 133850732 133851252 -69234280 + L1M2 LINE L1 3677 4214 -1932 2309 178 31 28 chr5 133851251 133851965 -69233567 + L1M2 LINE L1 4836 5565 -726 * 908 216 12 122 chr5 133851966 133852285 -69233247 + MLT2B1 LTR ERVL 177 460 -60 219 188 0 0 chr5 133852306 133852354 -69233178 + (TA)n Simple_repeat Simple_repeat 1 48 0 465 304 61 28 chr5 133853107 133853354 -69232178 - MIR SINE MIR -1 261 7 16485 119 15 9 chr5 133853648 133855829 -69229703 - L1PA8A LINE L1 -1 6130 3930 2361 69 0 3 chr5 133855829 133856117 -69229415 - AluY SINE Alu -9 302 16 16485 119 15 9 chr5 133856117 133857345 -69228187 - L1PA8A LINE L1 -2201 3930 2710 2114 184 35 6 chr5 133857350 133857833 -69227699 + L1PB4 LINE L1 5657 6153 -3 27 49 0 0 chr5 133857833 133857874 -69227658 + AT_rich Low_complexity Low_complexity 1 41 0 361 213 0 53 chr5 133858230 133858324 -69227208 - MLT1G1 LTR MaLR -3 539 451 845 273 66 35 chr5 133858385 133858674 -69226858 - MLT1G1 LTR MaLR -236 359 62 249 33 0 0 chr5 133858691 133858721 -69226811 + (TG)n Simple_repeat Simple_repeat 1 30 0 263 322 0 23 chr5 133859288 133859375 -69226157 - L2 LINE L2 -4 3268 3184 1813 139 7 33 chr5 133860699 133861002 -69224530 + AluSx SINE Alu 1 295 -17 2228 99 3 0 chr5 133861265 133861558 -69223974 + AluSc SINE Alu 1 294 -15 13241 149 44 8 chr5 133861752 133864083 -69221449 + Tigger1 DNA MER2_type 3 2417 -1 590 239 99 21 chr5 133864358 133864500 -69221032 + MIR SINE MIR 41 193 -69 2183 125 11 22 chr5 133864871 133865230 -69220302 - THE1A LTR MaLR 0 355 1 227 344 140 21 chr5 133866020 133866206 -69219326 + MIR SINE MIR 55 262 0 2288 93 0 3 chr5 133866379 133866690 -69218842 + AluSg SINE Alu 1 310 0 35 63 0 0 chr5 133866907 133866970 -69218562 + AT_rich Low_complexity Low_complexity 1 63 0 10621 190 39 16 chr5 133868366 133870930 -69214602 + L1PA13 LINE L1 2957 5591 -572 716 168 20 13 chr5 133870930 133871079 -69214453 + L1PA13 LINE L1 6010 6159 -4 10621 190 39 16 chr5 133871079 133871092 -69214440 + L1PA13 LINE L1 5591 5602 -561 241 244 143 45 chr5 133872509 133872775 -69212757 - L1M4 LINE L1 -826 5320 5029 381 302 15 20 chr5 133873155 133873357 -69212175 - L1M4 LINE L1 -1430 4716 4516 1972 182 20 10 chr5 133873801 133874202 -69211330 - L1PA16 LINE L1 0 6166 5762 331 312 121 0 chr5 133874212 133874369 -69211163 - L1M4 LINE L1 -3754 2392 2217 14592 227 22 11 chr5 133875947 133881494 -69204038 - L1PA16 LINE L1 -3 6814 1180 22 94 0 0 chr5 133881802 133881866 -69203666 + AT_rich Low_complexity Low_complexity 1 64 0 25 51 0 0 chr5 133881898 133881937 -69203595 + AT_rich Low_complexity Low_complexity 1 39 0 1468 217 7 14 chr5 133881999 133882294 -69203238 + AluJo SINE Alu 1 293 -19 349 158 61 12 chr5 133884468 133884550 -69200982 - L1MB8 LINE L1 0 6178 6093 28 0 0 26 chr5 133884552 133884569 -69200963 + AT_rich Low_complexity Low_complexity 1 17 -21 904 231 5 0 chr5 133884569 133884785 -69200747 - L1MB4 LINE L1 -6 6174 5958 28 0 0 26 chr5 133884785 133884806 -69200726 + AT_rich Low_complexity Low_complexity 17 38 0 253 168 56 40 chr5 133885683 133885808 -69199724 + (TTAAA)n Simple_repeat Simple_repeat 5 131 0 2448 113 6 3 chr5 133885814 133886168 -69199364 + THE1A LTR MaLR 1 355 0 11335 100 4 7 chr5 133886168 133887753 -69197779 + THE1A-int LTR MaLR 1 1580 0 2449 96 14 8 chr5 133887753 133888106 -69197426 + THE1A LTR MaLR 1 355 0 24 32 0 0 chr5 133888919 133888950 -69196582 + AT_rich Low_complexity Low_complexity 1 31 0 594 283 30 38 chr5 133890434 133890672 -69194860 - MIR SINE MIR 0 262 20 249 108 0 0 chr5 133890743 133890780 -69194752 + (T)n Simple_repeat Simple_repeat 1 37 0 250 411 16 0 chr5 133891140 133891269 -69194263 + L2 LINE L2 3173 3303 -10 219 333 63 18 chr5 133891701 133891812 -69193720 - L3 LINE CR1 -14 1563 1448 23 86 0 0 chr5 133893035 133893093 -69192439 + AT_rich Low_complexity Low_complexity 1 58 0 271 375 48 0 chr5 133895159 133895263 -69190269 - L2 LINE L2 -21 3251 3143 681 304 142 80 chr5 133896009 133896684 -69188848 + L2 LINE L2 2044 2760 -554 1889 154 10 61 chr5 133896889 133897284 -69188248 + THE1C LTR MaLR 1 375 0 264 315 18 109 chr5 133897295 133897635 -69187897 + L2 LINE L2 2967 3275 -38 2195 106 0 0 chr5 133897835 133898154 -69187378 - AluSc SINE Alu 0 319 1 566 246 120 30 chr5 133898777 133898944 -69186588 + MIR SINE MIR 8 189 -73 280 149 0 0 chr5 133899242 133899289 -69186243 + L1MA7 LINE L1 6179 6225 -66 1003 219 30 13 chr5 133899855 133900092 -69185440 + MIR SINE MIR 1 241 -21 2167 132 42 22 chr5 133900123 133900480 -69185052 + THE1B LTR MaLR 1 364 0 1576 208 0 26 chr5 133900702 133901015 -69184517 - AluJb SINE Alu -7 305 1 347 298 123 29 chr5 133901230 133901401 -69184131 - MIR SINE MIR -71 191 5 1634 211 67 51 chr5 133901509 133902017 -69183515 + L1MB8 LINE L1 5663 6178 0 237 312 108 0 chr5 133902531 133902624 -69182908 - MIR SINE MIR -110 152 50 840 68 23 0 chr5 133904007 133904140 -69181392 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 2436 137 8 10 chr5 133904258 133904644 -69180888 - L1PA15 LINE L1 -7 6158 5774 422 137 0 118 chr5 133904651 133904753 -69180779 - L1PA15 LINE L1 -470 5695 5606 347 280 92 50 chr5 133905066 133905498 -69180034 - L1MDa LINE L1 -875 1615 1132 281 306 48 0 chr5 133905642 133905789 -69179743 - L1MDa LINE L1 -5281 838 685 316 301 87 53 chr5 133905891 133906097 -69179435 - L1MDa LINE L1 -5595 524 312 920 169 82 0 chr5 133906594 133906777 -69178755 + L1PB1 LINE L1 3 200 -6663 13260 165 52 26 chr5 133906779 133909739 -69175793 + L1PB1 LINE L1 636 3518 -3349 2034 129 3 7 chr5 133909739 133910034 -69175498 + AluSx SINE Alu 1 294 -18 13260 165 52 26 chr5 133910034 133911401 -69174131 + L1PB1 LINE L1 3518 4848 -2019 207 0 0 0 chr5 133911401 133911424 -69174108 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 13260 165 52 26 chr5 133911424 133913116 -69172416 + L1PB1 LINE L1 4848 6802 -65 419 175 0 72 chr5 133913131 133913228 -69172304 + AluSc SINE Alu 208 297 -12 2179 162 3 0 chr5 133913301 133913660 -69171872 - MER46B DNA MER2_type 0 236 2 285 254 238 43 chr5 133913842 133914027 -69171505 - MIR SINE MIR -28 234 14 226 276 13 0 chr5 133914051 133914127 -69171405 + (CA)n Simple_repeat Simple_repeat 2 78 0 21 36 0 0 chr5 133914573 133914601 -69170931 + AT_rich Low_complexity Low_complexity 1 28 0 298 154 0 0 chr5 133914892 133914944 -69170588 - L1 LINE L1 -2196 3950 3899 * 3784 209 14 51 chr5 133914940 133915718 -69169814 + L1PA16 LINE L1 5414 6162 -4 248 325 71 24 chr5 133916613 133916782 -69168750 - L2 LINE L2 -5 3308 3132 311 350 45 42 chr5 133917198 133917535 -69167997 + L2 LINE L2 2244 2581 -733 23 0 0 0 chr5 133918681 133918704 -69166828 + AT_rich Low_complexity Low_complexity 1 23 0 2413 45 0 0 chr5 133918815 133919101 -69166431 - AluY SINE Alu 0 311 26 220 303 15 0 chr5 133919356 133919422 -69166110 - L2 LINE L2 -6 3307 3241 1047 149 0 0 chr5 133919550 133919731 -69165801 - L1 LINE L1 -1840 4306 4126 1670 230 43 24 chr5 133920571 133921037 -69164495 + L1MA9 LINE L1 5800 6274 -38 499 308 111 48 chr5 133921263 133921788 -69163744 - L1ME2 LINE L1 -287 5946 5392 354 309 37 62 chr5 133922134 133922406 -69163126 - L1ME2 LINE L1 -4220 2176 1912 384 288 122 54 chr5 133922472 133922882 -69162650 - HAL1b LINE L1 -654 694 257 182 354 67 63 chr5 133923707 133924153 -69161379 + L2 LINE L2 2824 3271 -1 2038 156 0 0 chr5 133924866 133925168 -69160364 + AluSx SINE Alu 1 302 -10 417 304 137 15 chr5 133925210 133925414 -69160118 + MIR SINE MIR 34 262 0 297 135 0 0 chr5 133926461 133926513 -69159019 + (CA)n Simple_repeat Simple_repeat 2 53 0 243 0 0 0 chr5 133927192 133927219 -69158313 + (TA)n Simple_repeat Simple_repeat 1 27 0 999 61 0 8 chr5 133927353 133927484 -69158048 - LTR7 LTR ERV1 -320 130 1 2371 85 50 19 chr5 133927484 133927860 -69157672 - HERVH LTR ERV1 0 7713 7326 1235 116 82 5 chr5 133927862 133928069 -69157463 - HERVH LTR ERV1 -1894 5819 5597 * 4293 151 0 1 chr5 133928066 133928729 -69156803 - HERVH LTR ERV1 -2564 5149 4488 3236 124 8 6 chr5 133928731 133929232 -69156300 - HERVH LTR ERV1 -3720 3993 3492 * 20375 97 57 24 chr5 133929222 133932407 -69153125 - HERVH LTR ERV1 -4423 3290 1 3399 69 0 7 chr5 133932409 133932860 -69152672 - LTR7 LTR ERV1 -2 448 1 424 277 85 7 chr5 133934481 133934622 -69150910 + MER5B DNA MER1_type 4 155 -23 242 306 171 36 chr5 133936494 133936575 -69148957 - MIR SINE MIR -3 259 190 1550 213 83 69 chr5 133936575 133937082 -69148450 - MER67D LTR ERV1 0 514 1 242 306 171 36 chr5 133937082 133937222 -69148310 - MIR SINE MIR -72 190 8 13538 29 1 0 chr5 133938550 133940193 -69145339 - L1P LINE L1 -2805 3341 1698 21 0 0 0 chr5 133940479 133940500 -69145032 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 133942965 133943002 -69142530 + AT_rich Low_complexity Low_complexity 1 37 0 227 299 75 91 chr5 133943317 133943523 -69142009 - L2 LINE L2 -94 3178 2977 387 0 0 0 chr5 133943523 133943566 -69141966 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 299 75 91 chr5 133943566 133943690 -69141842 - L2 LINE L2 -295 2977 2853 243 0 0 0 chr5 133943825 133943852 -69141680 + (TG)n Simple_repeat Simple_repeat 2 28 0 1236 188 8 60 chr5 133944941 133945207 -69140325 + AluSx SINE Alu 1 252 -60 263 364 22 17 chr5 133945555 133945786 -69139746 - HAL1 LINE L1 -727 1780 1549 775 309 64 58 chr5 133945863 133946429 -69139103 - HAL1 LINE L1 -1111 1396 828 313 339 100 23 chr5 133947491 133947751 -69137781 + MLT1J LTR MaLR 92 371 -140 23 0 0 0 chr5 133947782 133947805 -69137727 + AT_rich Low_complexity Low_complexity 1 23 0 291 114 0 0 chr5 133947805 133947849 -69137683 + (TG)n Simple_repeat Simple_repeat 1 44 0 222 333 17 0 chr5 133948216 133948276 -69137256 + L2 LINE L2 3148 3208 -64 24 53 0 0 chr5 133948938 133948976 -69136556 + AT_rich Low_complexity Low_complexity 1 38 0 219 382 81 11 chr5 133949373 133949645 -69135887 - L3b LINE CR1 -191 1392 1102 204 328 142 16 chr5 133950162 133950345 -69135187 - MIR SINE MIR 0 262 57 1832 214 63 2 chr5 133950646 133951057 -69134475 + MER63B DNA MER1_type 1 436 0 24 32 0 0 chr5 133951764 133951795 -69133737 + AT_rich Low_complexity Low_complexity 1 31 0 1841 127 4 0 chr5 133951901 133952168 -69133364 + AluSc SINE Alu 40 307 -2 7954 35 0 0 chr5 133952252 133953982 -69131550 - L1PA4 LINE L1 0 6155 4425 2791 173 45 18 chr5 133954299 133954899 -69130633 + L1MC3 LINE L1 7163 7778 -7 787 263 43 18 chr5 133954949 133955230 -69130302 + L1ME3A LINE L1 5883 6170 0 781 289 114 16 chr5 133955851 133956255 -69129277 + MLT1J LTR MaLR 1 505 -6 457 285 103 35 chr5 133956521 133956917 -69128615 + HAL1 LINE L1 903 1325 -1182 23 0 0 0 chr5 133957299 133957322 -69128210 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 133958392 133958413 -69127119 + (A)n Simple_repeat Simple_repeat 1 21 0 800 250 29 10 chr5 133959264 133959468 -69126064 - MER63A DNA MER1_type 0 210 3 255 31 0 0 chr5 133959952 133959984 -69125548 + (TTG)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr5 133960421 133960443 -69125089 + AT_rich Low_complexity Low_complexity 1 22 0 315 257 27 40 chr5 133961143 133961291 -69124241 - HAL1b LINE L1 -689 659 514 986 150 48 0 chr5 133961364 133961551 -69123981 - L1MA4 LINE L1 -6 6294 6099 348 231 22 11 chr5 133961610 133961701 -69123831 - HAL1b LINE L1 -765 583 492 307 270 117 12 chr5 133963285 133963448 -69122084 - HAL1b LINE L1 -740 608 429 641 255 119 58 chr5 133963511 133963974 -69121558 - HAL1b LINE L1 -769 579 89 1410 310 83 55 chr5 133963997 133964648 -69120884 + MER115 DNA AcHobo 25 693 0 2081 121 0 0 chr5 133966362 133966673 -69118859 + AluSx SINE Alu 1 311 0 17106 30 2 0 chr5 133966802 133969614 -69115918 - L1PA4 LINE L1 0 6155 3338 271 342 13 0 chr5 133970230 133970309 -69115223 - L2 LINE L2 -3 3269 3190 300 380 7 7 chr5 133970313 133970455 -69115077 - L2 LINE L2 -264 3008 2867 983 261 121 21 chr5 133970502 133970600 -69114932 - MER63B DNA MER1_type -636 426 339 1683 118 0 42 chr5 133970600 133970863 -69114669 + AluSg SINE Alu 45 296 -14 983 261 121 21 chr5 133970863 133971151 -69114381 - MER63B DNA MER1_type -723 339 1 295 395 93 28 chr5 133971155 133971628 -69113904 - L2 LINE L2 -499 2815 2312 554 293 160 21 chr5 133971946 133972277 -69113255 + LTR16B LTR ERVL 1 377 -87 1313 297 112 9 chr5 133972314 133972964 -69112568 - L1MCc LINE L1 -5650 773 24 27 62 0 0 chr5 133974063 133974111 -69111421 + AT_rich Low_complexity Low_complexity 1 48 0 626 253 27 82 chr5 133979180 133979437 -69106095 - MIR SINE MIR -5 257 15 276 220 0 34 chr5 133979569 133979628 -69105904 - MLT1I LTR MaLR 0 409 353 2525 23 7 3 chr5 133981747 133982046 -69103486 + AluY SINE Alu 1 300 -11 210 143 0 0 chr5 133983265 133983300 -69102232 + (TA)n Simple_repeat Simple_repeat 1 35 0 2060 130 0 0 chr5 133983305 133983605 -69101927 + AluY SINE Alu 1 300 -11 26 30 0 0 chr5 133983655 133983688 -69101844 + AT_rich Low_complexity Low_complexity 1 33 0 563 129 65 16 chr5 133984134 133984258 -69101274 + L1MA8 LINE L1 6147 6276 -15 2289 59 7 6 chr5 133984890 133985254 -69100278 - LTR7 LTR ERV1 -2 448 126 2474 74 0 0 chr5 133985679 133985990 -69099542 - AluY SINE Alu 0 311 1 4932 145 24 17 chr5 133986042 133986936 -69098596 - L1MA4 LINE L1 -10 6290 5391 24 32 0 0 chr5 133987154 133987185 -69098347 + AT_rich Low_complexity Low_complexity 1 31 0 1567 217 47 96 chr5 133987290 133987378 -69098154 - MLT1D LTR MaLR 0 505 414 644 233 7 20 chr5 133987378 133987524 -69098008 - U4 snRNA snRNA -1 144 1 1567 217 47 96 chr5 133987524 133987966 -69097566 - MLT1D LTR MaLR -91 414 1 21 0 0 0 chr5 133987971 133987992 -69097540 + AT_rich Low_complexity Low_complexity 1 21 0 207 323 0 32 chr5 133988002 133988064 -69097468 + L2 LINE L2 3137 3196 -76 1233 211 21 77 chr5 133988778 133989167 -69096365 - L1MA9 LINE L1 -38 6274 5908 * 3470 157 26 43 chr5 133989140 133989957 -69095575 + L1MA9 LINE L1 5143 5936 -376 231 334 24 32 chr5 133990266 133990392 -69095140 - MIR SINE MIR -57 151 20 208 239 22 22 chr5 133990874 133990966 -69094566 + (TATAA)n Simple_repeat Simple_repeat 2 93 0 5248 84 4 1 chr5 133991096 133991802 -69093730 + L1PA8A LINE L1 5416 6123 -8 229 193 11 91 chr5 133991814 133991902 -69093630 - L1M4 LINE L1 -1071 5075 4995 2039 126 14 0 chr5 133993277 133993571 -69091961 + AluSx SINE Alu 1 298 -14 197 371 134 0 chr5 133993632 133993729 -69091803 - L2 LINE L2 -12 3260 3151 305 242 32 11 chr5 133994935 133995030 -69090502 - MLT1L LTR MaLR 0 615 519 305 274 75 52 chr5 133995220 133995472 -69090060 - MLT1L LTR MaLR -343 272 15 180 111 0 0 chr5 133997831 133997858 -69087674 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 505 296 37 109 chr5 133997867 133998353 -69087179 - L2 LINE L2 -20 3293 2843 585 283 91 53 chr5 133998395 133998602 -69086930 - L2 LINE L2 -572 2742 2521 2366 83 34 9 chr5 133998602 133998951 -69086581 - L1PA7 LINE L1 -1 6153 5796 585 283 91 53 chr5 133998951 133999008 -69086524 - L2 LINE L2 -793 2521 2468 514 304 13 6 chr5 133999399 133999557 -69085975 + MIR SINE MIR 2 160 -102 212 264 19 9 chr5 133999583 133999689 -69085843 + (TA)n Simple_repeat Simple_repeat 2 108 0 856 281 20 16 chr5 134000987 134001240 -69084292 + MIR SINE MIR 6 259 -3 614 337 132 26 chr5 134001511 134001929 -69083603 - L2 LINE L2 0 3313 2852 1159 218 0 73 chr5 134002094 134002383 -69083149 + AluJo SINE Alu 1 268 -44 189 74 0 0 chr5 134002554 134002581 -69082951 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 391 346 143 30 chr5 134003707 134004204 -69081328 + L2 LINE L2 1830 2382 -932 328 378 45 22 chr5 134005970 134006192 -69079340 + MIR SINE MIR 26 252 -10 367 228 25 0 chr5 134006269 134006348 -69079184 + L2 LINE L2 3158 3238 -75 384 361 76 38 chr5 134006964 134007385 -69078147 - L2 LINE L2 -850 2464 2028 873 260 14 5 chr5 134008110 134008318 -69077214 - MER63A DNA MER1_type 0 210 1 6104 194 42 13 chr5 134008565 134009771 -69075761 + MER21B-int LTR ERV1 2848 4087 -104 1434 172 11 22 chr5 134009978 134010245 -69075287 - AluJo SINE Alu -14 298 35 313 284 0 0 chr5 134010292 134010359 -69075173 + MER21B LTR ERV1 1 67 -796 206 162 0 0 chr5 134011167 134011204 -69074328 + (TG)n Simple_repeat Simple_repeat 2 38 0 2129 208 16 5 chr5 134011773 134011842 -69073690 - L1MB2 LINE L1 -94 6077 6009 5187 242 49 50 chr5 134011842 134012492 -69073040 - L1ME1 LINE L1 -165 6001 5351 195 42 0 0 chr5 134012492 134012516 -69073016 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5187 242 49 50 chr5 134012516 134013126 -69072406 - L1ME1 LINE L1 -815 5351 4741 1772 107 0 0 chr5 134013126 134013359 -69072173 - AluSx SINE Alu -45 267 35 5187 242 49 50 chr5 134013359 134014370 -69071162 - L1ME1 LINE L1 -1425 4741 3743 2641 210 65 83 chr5 134015176 134016100 -69069432 - L1MB2 LINE L1 -1899 4247 3341 32 0 0 0 chr5 134016566 134016598 -69068934 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 134018082 134018104 -69067428 + AT_rich Low_complexity Low_complexity 1 22 0 230 143 54 18 chr5 134018431 134018487 -69067045 - L1MC4a LINE L1 -533 7275 7218 709 279 97 18 chr5 134018644 134018984 -69066548 - L1M4 LINE L1 -1239 4907 4541 917 272 54 66 chr5 134019151 134019419 -69066113 - L1M4 LINE L1 -1631 4515 4245 492 225 108 17 chr5 134019419 134019539 -69065993 - FLAM_A SINE Alu -2 131 1 917 272 54 66 chr5 134019539 134019772 -69065760 - L1M4 LINE L1 -1901 4245 4011 189 0 0 0 chr5 134019772 134019793 -69065739 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1895 115 4 0 chr5 134019795 134020074 -69065458 - AluSx SINE Alu -32 280 1 917 272 54 66 chr5 134020074 134020216 -69065316 - L1M4 LINE L1 -2136 4010 3876 207 196 0 0 chr5 134020655 134020701 -69064831 + T-rich Low_complexity Low_complexity 3 48 0 1700 204 78 37 chr5 134020839 134021324 -69064208 - MLT1D LTR MaLR 0 505 1 476 263 39 34 chr5 134021512 134021717 -69063815 - HAL1b LINE L1 -739 609 404 359 288 63 31 chr5 134021748 134021970 -69063562 - HAL1b LINE L1 -1000 348 120 1030 272 36 65 chr5 134022077 134022522 -69063010 - LTR45 LTR ERV1 -93 432 1 222 37 0 0 chr5 134023609 134023636 -69061896 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 231 61 0 0 chr5 134023643 134023676 -69061856 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1833 127 0 43 chr5 134023680 134023980 -69061552 - AluSx SINE Alu -25 287 1 583 272 22 39 chr5 134024547 134024727 -69060805 - MER5B DNA MER1_type -1 177 1 24 0 0 0 chr5 134024952 134024976 -69060556 + AT_rich Low_complexity Low_complexity 1 24 0 258 207 0 0 chr5 134025708 134025766 -69059766 + GA-rich Low_complexity Low_complexity 3 60 0 227 330 125 29 chr5 134026634 134026946 -69058586 - L2 LINE L2 -120 3193 2852 2191 96 0 27 chr5 134028502 134028803 -69056729 + AluSx SINE Alu 1 293 -19 4272 165 59 18 chr5 134028803 134029674 -69055858 - L1MA4 LINE L1 -9 6291 5386 21 36 0 0 chr5 134029754 134029782 -69055750 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 134030179 134030205 -69055327 + AT_rich Low_complexity Low_complexity 1 26 0 219 306 24 12 chr5 134031121 134031206 -69054326 - L2 LINE L2 -520 2794 2709 204 231 0 0 chr5 134031716 134031755 -69053777 + (ATG)n Simple_repeat Simple_repeat 3 41 0 379 286 25 8 chr5 134031762 134031881 -69053651 - MIR SINE MIR -4 258 138 498 70 90 0 chr5 134031940 134032146 -69053386 + (TA)n Simple_repeat Simple_repeat 1 224 0 1153 40 13 0 chr5 134032564 134032714 -69052818 + L1PA4 LINE L1 6001 6152 -3 28 29 0 0 chr5 134032714 134032749 -69052783 + AT_rich Low_complexity Low_complexity 1 35 0 2798 186 15 2 chr5 134032749 134033277 -69052255 - L1PA16 LINE L1 -9 6157 5623 3714 132 34 2 chr5 134033299 134033881 -69051651 - MER51A LTR ERV1 -17 617 17 3453 191 29 29 chr5 134033881 134035013 -69050519 - L1PA16 LINE L1 -582 5584 4465 21 0 0 0 chr5 134035094 134035115 -69050417 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 134035184 134035216 -69050316 + AT_rich Low_complexity Low_complexity 1 32 0 1639 168 70 22 chr5 134035982 134036340 -69049192 + THE1C LTR MaLR 1 375 0 2463 75 0 3 chr5 134036483 134036788 -69048744 - AluY SINE Alu -7 304 1 268 177 16 0 chr5 134036865 134036927 -69048605 + L1MC3 LINE L1 5221 5283 -863 * 1691 196 60 25 chr5 134036915 134037385 -69048147 + L1MC3 LINE L1 5879 6364 -1421 1959 202 30 9 chr5 134037388 134037828 -69047704 + L1MC3 LINE L1 6153 6601 -1184 436 221 105 26 chr5 134037820 134038010 -69047522 - L1MC5 LINE L1 -46 7915 7711 * 1151 305 70 6 chr5 134038164 134038521 -69047011 + LTR16C LTR ERVL 112 491 0 328 199 46 93 chr5 134038533 134038684 -69046848 - L1MC5 LINE L1 -298 7663 7520 4760 147 42 28 chr5 134038945 134039839 -69045693 - L1MA4A LINE L1 -2 6301 5395 7456 194 23 16 chr5 134039971 134040558 -69044974 - L1MA4A LINE L1 -771 5375 4793 1710 129 61 14 chr5 134040558 134040838 -69044694 - AluSx SINE Alu -19 293 1 7456 194 23 16 chr5 134040838 134041961 -69043571 - L1MA4A LINE L1 -1353 4793 3654 1960 277 60 23 chr5 134043023 134043864 -69041668 - L1ME3A LINE L1 -10 6160 5289 852 220 94 0 chr5 134045340 134045563 -69039969 - L1MB7 LINE L1 -41 6143 5900 21 0 0 0 chr5 134046287 134046308 -69039224 + AT_rich Low_complexity Low_complexity 1 21 0 1537 181 27 8 chr5 134046584 134047471 -69038061 - L1MA10 LINE L1 -3 6331 5285 2578 241 55 1 chr5 134047471 134048140 -69037392 + L1MA10 LINE L1 4612 5316 -830 225 0 0 0 chr5 134048326 134048351 -69037181 + (TC)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr5 134048350 134048371 -69037161 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 207 0 0 0 chr5 134148554 134148577 -68936955 + (T)n Simple_repeat Simple_repeat 1 23 0 845 246 103 0 chr5 134148703 134148906 -68936626 + MER58A DNA MER1_type 1 224 0 242 320 140 54 chr5 134149494 134149716 -68935816 + MIR SINE MIR 8 248 -14 291 256 37 0 chr5 134150091 134150173 -68935359 - LTR67 LTR ERVL -50 507 423 345 62 0 0 chr5 134152303 134152351 -68933181 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr5 134152596 134152617 -68932915 + AT_rich Low_complexity Low_complexity 1 21 0 214 269 8 42 chr5 134153329 134153448 -68932084 + (TA)n Simple_repeat Simple_repeat 2 116 0 1646 153 18 0 chr5 134153521 134153802 -68931730 - L1MC1 LINE L1 -209 6124 5839 34 24 0 0 chr5 134154288 134154329 -68931203 + AT_rich Low_complexity Low_complexity 1 41 0 1649 236 37 49 chr5 134154446 134154993 -68930539 - L1MC4 LINE L1 -246 7796 7257 1423 238 18 55 chr5 134155023 134155481 -68930051 - L1MC4 LINE L1 -954 7088 6648 252 28 28 0 chr5 134155510 134155546 -68929986 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 897 200 0 0 chr5 134155546 134155696 -68929836 - FRAM SINE Alu -27 149 1 443 213 98 16 chr5 134155696 134155818 -68929714 - L1MC4 LINE L1 -1444 6598 6467 34 24 0 0 chr5 134156827 134156868 -68928664 + AT_rich Low_complexity Low_complexity 1 41 0 238 271 14 14 chr5 134156901 134156971 -68928561 + L2 LINE L2 1612 1681 -1633 294 381 106 23 chr5 134157213 134157599 -68927933 + L2 LINE L2 2855 3272 0 385 314 143 0 chr5 134158265 134158440 -68927092 + MER58C DNA MER1_type 1 200 -15 2146 102 7 3 chr5 134158825 134159119 -68926413 - AluSq SINE Alu -18 295 1 1212 157 60 28 chr5 134159241 134159553 -68925979 - THE1C LTR MaLR -1 427 1 28 29 0 0 chr5 134160945 134160980 -68924552 + AT_rich Low_complexity Low_complexity 1 35 0 3462 183 45 70 chr5 134161188 134161475 -68924057 - L1PB4 LINE L1 -7 6149 5856 242 87 22 0 chr5 134161475 134161521 -68924011 - LTR66 LTR ERVL -170 440 394 3462 183 45 70 chr5 134161521 134162294 -68923238 - L1PB4 LINE L1 -300 5856 5069 1689 159 47 0 chr5 134162820 134163097 -68922435 - AluSx SINE Alu 0 312 23 181 351 61 18 chr5 134163308 134163422 -68922110 - L2 LINE L2 -33 3280 3162 2191 132 24 86 chr5 134165060 134165551 -68919981 + L1MA8 LINE L1 5825 6285 -6 2136 121 0 0 chr5 134167049 134167338 -68918194 + AluSq SINE Alu 1 289 -24 279 149 91 41 chr5 134167346 134167467 -68918065 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 183 27 54 27 chr5 134167511 134167548 -68917984 + (TA)n Simple_repeat Simple_repeat 2 39 0 725 211 37 51 chr5 134168683 134168977 -68916555 + pTR5 LTR ERV1 741 1030 -1408 3219 103 196 32 chr5 134169197 134169788 -68915744 + LTR12 LTR ERV1 1 688 0 252 0 0 0 chr5 134171511 134171539 -68913993 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr5 134171845 134171866 -68913666 + AT_rich Low_complexity Low_complexity 1 21 0 504 99 0 88 chr5 134172734 134172825 -68912707 + MLT2B1 LTR ERVL 3 85 -435 26 74 0 0 chr5 134173040 134173094 -68912438 + AT_rich Low_complexity Low_complexity 1 54 0 190 239 90 30 chr5 134173344 134173411 -68912121 - MIR SINE MIR -19 243 173 297 289 86 61 chr5 134175532 134175729 -68909803 + MIR SINE MIR 60 261 -1 198 298 18 0 chr5 134176609 134176666 -68908866 + MIR SINE MIR 49 106 -156 26 50 0 0 chr5 134177610 134177650 -68907882 + AT_rich Low_complexity Low_complexity 1 40 0 319 361 25 25 chr5 134177709 134177867 -68907665 - MIR SINE MIR -49 213 56 293 333 9 0 chr5 134178354 134178459 -68907073 + L1MC/D LINE L1 5536 5641 -2167 1351 193 68 3 chr5 134178681 134178976 -68906556 - MER65A LTR ERV1 -34 411 98 331 200 0 0 chr5 134179009 134179079 -68906453 - L1MA4A LINE L1 -156 6147 6078 1987 240 83 9 chr5 134179081 134179657 -68905875 - MER65A-int LTR ERV1 -16 4855 4237 534 185 28 9 chr5 134179658 134179766 -68905766 - MER65A-int LTR ERV1 -740 4131 4022 677 63 21 0 chr5 134179771 134179866 -68905666 + AluY SINE Alu 205 301 -10 902 269 71 4 chr5 134179866 134180213 -68905319 - MER65A-int LTR ERV1 -858 4013 3606 330 200 44 67 chr5 134180300 134180390 -68905142 - MER31-int LTR ERV1 -2424 5696 5609 * 495 169 0 22 chr5 134180388 134180477 -68905055 - MER31-int LTR ERV1 -1137 3799 3713 6690 181 22 26 chr5 134180485 134180633 -68904899 - L1MA4A LINE L1 -9 6996 6849 1795 158 52 47 chr5 134180633 134180995 -68904537 + THE1B LTR MaLR 1 364 0 11245 111 5 2 chr5 134180995 134182570 -68902962 + THE1B-int LTR MaLR 1 1580 0 2065 143 51 20 chr5 134182570 134182920 -68902612 + THE1B LTR MaLR 3 364 0 6690 181 22 26 chr5 134182920 134184560 -68900972 - L1MA4A LINE L1 -154 6851 5206 2684 99 0 0 chr5 134184560 134184913 -68900619 + THE1A LTR MaLR 3 355 0 10907 103 9 27 chr5 134184913 134186522 -68899010 + THE1A-int LTR MaLR 1 1580 0 2623 100 6 0 chr5 134186525 134186875 -68898657 + THE1A LTR MaLR 4 355 0 6690 181 22 26 chr5 134186875 134187558 -68897974 - L1MA4A LINE L1 -1800 5205 4518 5333 148 25 7 chr5 134187573 134188450 -68897082 - MER4D LTR ERV1 -9 894 2 5662 201 39 63 chr5 134188452 134190253 -68895279 - L1MA4A LINE L1 -2328 4520 2676 1788 195 0 3 chr5 134190253 134190566 -68894966 - AluJo SINE Alu 0 312 1 5662 201 39 63 chr5 134190566 134190725 -68894807 - L1MA4A LINE L1 -4172 2676 2606 2071 224 26 66 chr5 134190725 134191302 -68894230 + MLT2B3 LTR ERVL 1 554 0 5662 201 39 63 chr5 134191302 134191329 -68894203 - L1MA4A LINE L1 -4242 2606 2580 * 8947 215 59 39 chr5 134191323 134193626 -68891906 - L1MA4A LINE L1 -4489 2360 13 186 225 183 0 chr5 134194620 134194691 -68890841 - L2 LINE L2 0 3313 3230 23 0 0 0 chr5 134194711 134194734 -68890798 + AT_rich Low_complexity Low_complexity 1 23 0 5829 111 1 3 chr5 134194938 134195792 -68889740 + L1PA7 LINE L1 3804 4655 -1491 2603 114 5 2 chr5 134195791 134196184 -68889348 + L1P LINE L1 1898 2291 -3855 * 4815 65 0 45 chr5 134196184 134196843 -68888689 + L1PA7 LINE L1 5511 6147 -7 385 302 69 0 chr5 134197127 134197243 -68888289 - MER94 DNA DNA 0 134 11 1050 181 47 47 chr5 134197301 134197606 -68887926 - MER61B LTR ERV1 -28 396 1 669 125 117 25 chr5 134197741 134197861 -68887671 + FLAM_C SINE Alu 3 133 0 26 0 0 0 chr5 134198184 134198210 -68887322 + AT_rich Low_complexity Low_complexity 1 26 0 415 337 47 14 chr5 134198740 134199065 -68886467 - MLT1K LTR MaLR -87 501 122 22 35 0 0 chr5 134200096 134200125 -68885407 + AT_rich Low_complexity Low_complexity 1 29 0 295 342 125 11 chr5 134200236 134200596 -68884936 + L1ME LINE L1 5485 5885 -293 25 0 0 0 chr5 134200865 134200890 -68884642 + AT_rich Low_complexity Low_complexity 1 25 0 6929 60 2 17 chr5 134201255 134201866 -68883666 + L1PA7 LINE L1 4878 5496 -658 2259 121 0 0 chr5 134201866 134202172 -68883360 + AluY SINE Alu 4 309 -2 6929 60 2 17 chr5 134202172 134202835 -68882697 + L1PA7 LINE L1 5496 6143 -11 369 289 99 0 chr5 134203154 134203275 -68882257 + MIR SINE MIR 118 250 -12 274 289 67 47 chr5 134203823 134203972 -68881560 - MLT1J LTR MaLR -13 498 347 28 0 0 0 chr5 134204128 134204156 -68881376 + AT_rich Low_complexity Low_complexity 1 28 0 445 296 24 0 chr5 134204175 134204300 -68881232 - MIR SINE MIR -20 242 115 228 272 204 10 chr5 134205205 134205308 -68880224 + MER5A DNA MER1_type 8 130 -59 213 327 80 49 chr5 134205763 134206026 -68879506 + L2 LINE L2 1384 1654 -1660 431 335 97 42 chr5 134206133 134206536 -68878996 + L2 LINE L2 2275 2699 -615 1324 150 98 4 chr5 134206579 134206833 -68878699 - L1MA9 LINE L1 0 6312 6035 322 329 125 49 chr5 134206857 134207307 -68878225 + L2 LINE L2 2751 3232 -81 24 0 0 0 chr5 134207721 134207745 -68877787 + AT_rich Low_complexity Low_complexity 1 24 0 236 311 11 0 chr5 134208478 134208568 -68876964 - MER113 DNA MER1_type? -430 91 1 188 302 0 0 chr5 134208568 134208621 -68876911 + MIR3 SINE MIR 153 205 -3 680 244 69 24 chr5 134208901 134209192 -68876340 + MER69 DNA AcHobo 2144 2447 -79 2669 23 0 0 chr5 134209297 134209603 -68875929 + AluYa5 SINE Alu 1 306 -5 3129 215 51 29 chr5 134209747 134211103 -68874429 - L1MB4 LINE L1 -13 6167 4775 307 82 0 61 chr5 134211136 134211185 -68874347 - MER75 DNA T2_type 0 504 459 2020 90 32 32 chr5 134211722 134212032 -68873500 + AluSp SINE Alu 1 310 -3 232 231 51 51 chr5 134212217 134212295 -68873237 - L2 LINE L2 -2 3311 3234 276 100 0 0 chr5 134212701 134212741 -68872791 + (TG)n Simple_repeat Simple_repeat 2 41 0 2500 176 66 19 chr5 134213700 134214218 -68871314 + MER34 LTR ERV1 1 542 0 28 0 0 0 chr5 134215019 134215047 -68870485 + AT_rich Low_complexity Low_complexity 1 28 0 5672 74 42 0 chr5 134215104 134215876 -68869656 + L1PA8 LINE L1 5365 6168 -4 21 89 0 0 chr5 134215919 134215975 -68869557 + AT_rich Low_complexity Low_complexity 1 56 0 32 0 0 0 chr5 134216472 134216504 -68869028 + AT_rich Low_complexity Low_complexity 1 32 0 766 93 0 0 chr5 134218058 134218165 -68867367 + AluSc SINE Alu 194 300 -9 1397 178 62 9 chr5 134218249 134218569 -68866963 - L1MA9 LINE L1 -820 5326 4990 * 3803 185 43 68 chr5 134218567 134219542 -68865990 + L1MA9 LINE L1 5342 6292 -20 585 270 37 25 chr5 134221048 134221211 -68864321 + MER5A DNA MER1_type 15 179 -10 1916 192 12 10 chr5 134222131 134222532 -68863000 - L1MD3 LINE L1 -8 7987 7586 890 244 76 25 chr5 134222534 134222890 -68862642 - L1MC4a LINE L1 -1207 6601 6228 228 296 75 80 chr5 134223215 134224137 -68861395 - L1 LINE L1 -1603 4543 3627 348 24 0 0 chr5 134224389 134224430 -68861102 + (TG)n Simple_repeat Simple_repeat 1 41 0 204 40 0 0 chr5 134224429 134224454 -68861078 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 21 71 0 0 chr5 134224640 134224682 -68860850 + AT_rich Low_complexity Low_complexity 1 42 0 6702 142 16 55 chr5 134224772 134225080 -68860452 - Tigger3b DNA MER2_type -1797 1231 913 2166 113 51 23 chr5 134225080 134225434 -68860098 + THE1B LTR MaLR 1 364 0 6702 142 16 55 chr5 134225434 134226406 -68859126 - Tigger3b DNA MER2_type -2115 913 1 245 79 79 26 chr5 134226930 134227006 -68858526 + (TTATA)n Simple_repeat Simple_repeat 1 80 0 1511 128 45 8 chr5 134227240 134227274 -68858258 - MLT2A1 LTR ERVL -8 436 405 351 0 0 0 chr5 134227274 134227313 -68858219 + (CA)n Simple_repeat Simple_repeat 2 40 0 1511 128 45 8 chr5 134227313 134227521 -68858011 - MLT2A1 LTR ERVL -39 405 185 302 160 11 85 chr5 134227578 134227672 -68857860 + L1MCa LINE L1 1999 2085 -4341 2102 128 13 0 chr5 134228305 134228611 -68856921 + AluSq SINE Alu 4 313 0 1000 197 79 5 chr5 134231572 134231775 -68853757 - MER58A DNA MER1_type -2 222 5 384 284 20 10 chr5 134232725 134232827 -68852705 + MER81 DNA DNA 1 103 -11 1268 201 36 26 chr5 134232863 134233440 -68852092 - MER63 DNA MER1_type 0 1061 283 25 31 0 0 chr5 134233761 134233793 -68851739 + AT_rich Low_complexity Low_complexity 1 32 0 31 44 0 0 chr5 134234192 134234237 -68851295 + AT_rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr5 134234317 134234344 -68851188 + AT_rich Low_complexity Low_complexity 1 27 0 297 152 76 0 chr5 134234778 134234844 -68850688 - L1MC2 LINE L1 -6 6338 6268 1349 89 76 9 chr5 134238167 134238392 -68847140 - MSTA LTR MaLR -188 240 1 1647 164 34 74 chr5 134238534 134238913 -68846619 - MLT1A1 LTR MaLR -1 364 1 1421 313 39 15 chr5 134239354 134239890 -68845642 + ERVL LTR ERVL 321 869 -4127 292 289 108 51 chr5 134240297 134240524 -68845008 + ERVL LTR ERVL 1475 1778 -3218 288 333 75 11 chr5 134241684 134241858 -68843674 + ERVL LTR ERVL 5097 5281 -483 198 0 0 0 chr5 134241976 134241998 -68843534 + (T)n Simple_repeat Simple_repeat 1 22 0 32 95 0 0 chr5 134243950 134244045 -68841487 + AT_rich Low_complexity Low_complexity 1 95 0 222 37 0 0 chr5 134244421 134244448 -68841084 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1767 168 10 7 chr5 134245302 134245599 -68839933 - AluJb SINE Alu -14 298 1 311 250 94 74 chr5 134245929 134245980 -68839552 - HAL1b LINE L1 -903 445 396 2216 97 3 3 chr5 134245980 134246278 -68839254 - AluSx SINE Alu -14 298 1 311 250 94 74 chr5 134246278 134246482 -68839050 - HAL1b LINE L1 -952 396 185 2290 110 3 0 chr5 134246850 134247159 -68838373 - AluSg SINE Alu 0 310 1 274 329 52 28 chr5 134247478 134247730 -68837802 - HAL1 LINE L1 -2190 317 60 266 337 51 0 chr5 134248373 134248471 -68837061 - MIR3 SINE MIR -19 189 87 21 89 0 0 chr5 134248783 134248839 -68836693 + AT_rich Low_complexity Low_complexity 1 56 0 1732 122 134 100 chr5 134249691 134250102 -68835430 - MSTA LTR MaLR -3 425 1 2088 129 42 20 chr5 134251455 134251811 -68833721 - THE1B LTR MaLR 0 364 1 206 150 0 25 chr5 134252904 134252944 -68832588 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 1765 182 57 114 chr5 134253536 134253795 -68831737 - MER67D LTR ERV1 -1 513 300 1471 200 37 51 chr5 134253795 134254170 -68831362 - MLT1A2 LTR MaLR 0 374 5 1765 182 57 114 chr5 134254170 134254453 -68831079 - MER67D LTR ERV1 -214 300 2 290 254 0 14 chr5 134255082 134255153 -68830379 - MER96B DNA MER1_type? 0 417 348 * 980 236 26 26 chr5 134255147 134255418 -68830114 + MER96B DNA MER1_type? 147 417 0 1098 218 33 0 chr5 134256219 134256430 -68829102 - MER58A DNA MER1_type -6 218 1 296 364 33 13 chr5 134257410 134257561 -68827971 - MIR3 SINE MIR -10 198 45 302 252 68 2 chr5 134258021 134258154 -68827378 - MER96B DNA MER1_type? 0 175 2 232 161 0 54 chr5 134258818 134258874 -68826658 + (TATATG)n Simple_repeat Simple_repeat 3 55 0 2210 186 11 2 chr5 134259431 134259877 -68825655 - L1MB3 LINE L1 -12 6171 5722 21 82 0 0 chr5 134259949 134259998 -68825534 + AT_rich Low_complexity Low_complexity 1 49 0 601 180 8 39 chr5 134260593 134260721 -68824811 - FLAM_A SINE Alu -7 135 12 3670 139 0 0 chr5 134261692 134262218 -68823314 - MER1A DNA MER1_type -1 526 1 29 70 0 0 chr5 134263946 134264003 -68821529 + AT_rich Low_complexity Low_complexity 1 57 0 1899 128 0 83 chr5 134264297 134264431 -68821101 + AluSc SINE Alu 1 145 -164 2541 61 0 3 chr5 134264431 134264743 -68820789 + AluY SINE Alu 1 311 0 1899 128 0 83 chr5 134264743 134264945 -68820587 + AluSc SINE Alu 145 309 0 659 268 57 0 chr5 134265057 134265214 -68820318 + MER45A DNA AcHobo 1 166 -12 495 197 32 144 chr5 134265281 134265469 -68820063 + MER5B DNA MER1_type 10 176 -2 369 235 0 130 chr5 134267475 134267675 -68817857 + L1MC4a LINE L1 3777 3950 -2196 607 331 59 44 chr5 134267838 134268410 -68817122 + L1MC4a LINE L1 4253 4833 -1313 1526 43 5 0 chr5 134268480 134268668 -68816864 - L1PA5 LINE L1 -124 6030 5842 1039 39 0 0 chr5 134268668 134268795 -68816737 + L1PA5 LINE L1 6025 6151 -3 1040 283 100 17 chr5 134269115 134269747 -68815785 + L1MC4a LINE L1 5267 5615 -568 314 317 147 36 chr5 134270162 134270386 -68815146 - L2 LINE L2 -2806 508 260 1875 236 37 44 chr5 134270782 134271346 -68814186 + MER92B LTR ERV1 6 565 -71 190 184 26 0 chr5 134271483 134271521 -68814011 - L2 LINE L2 -1062 2252 2214 1664 182 3 3 chr5 134271531 134271843 -68813689 + AluSx SINE Alu 1 312 0 229 114 0 0 chr5 134272337 134272372 -68813160 - L1PA4 LINE L1 -113 6042 6008 401 48 0 32 chr5 134272372 134272434 -68813098 + L1PA6 LINE L1 6095 6154 0 17090 40 2 1 chr5 134272506 134275386 -68810146 - L1PA5 LINE L1 0 6154 3276 1049 48 0 7 chr5 134275386 134275533 -68809999 + L1PA5 LINE L1 3147 3292 -2854 28 61 0 0 chr5 134276250 134276299 -68809233 + AT_rich Low_complexity Low_complexity 1 49 0 315 280 191 6 chr5 134276954 134277111 -68808421 - MIR SINE MIR -11 251 66 309 26 0 0 chr5 134277988 134278026 -68807506 + (TG)n Simple_repeat Simple_repeat 2 39 0 1172 189 157 16 chr5 134278026 134278275 -68807257 - AluJb SINE Alu -18 284 1 282 291 13 25 chr5 134278470 134278549 -68806983 - L2 LINE L2 -49 3264 3187 21 36 0 0 chr5 134279251 134279279 -68806253 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 134279334 134279369 -68806163 + AT_rich Low_complexity Low_complexity 1 35 0 333 222 56 0 chr5 134279379 134279469 -68806063 + L1MA10 LINE L1 6237 6331 -3 320 250 121 8 chr5 134279469 134279593 -68805939 - HAL1b LINE L1 -142 1206 1069 5857 107 28 5 chr5 134279655 134281250 -68804282 + L1PA10 LINE L1 4551 6157 -11 606 243 109 52 chr5 134281290 134281693 -68803839 - HAL1b LINE L1 -346 1002 577 834 299 41 44 chr5 134282195 134282783 -68802749 - HAL1b LINE L1 -695 653 68 1264 227 75 12 chr5 134283284 134283606 -68801926 + MLT1D LTR MaLR 164 505 0 376 349 32 61 chr5 134283987 134284265 -68801267 - L1ME LINE L1 -527 5637 5368 214 262 0 33 chr5 134285464 134285525 -68800007 + GA-rich Low_complexity Low_complexity 2 60 0 1808 75 17 0 chr5 134286618 134286859 -68798673 - HERVL-A1 LTR ERVL -5409 245 1 225 97 0 0 chr5 134286859 134286890 -68798642 - MLT2A1 LTR ERVL 0 444 414 444 275 0 0 chr5 134286894 134287032 -68798500 + (CATA)n Simple_repeat Simple_repeat 2 139 0 258 300 0 0 chr5 134287036 134287126 -68798406 + L1MC4 LINE L1 6614 6703 -1339 258 259 24 0 chr5 134287070 134287155 -68798377 - L1MC4 LINE L1 -1341 6701 6615 252 279 23 0 chr5 134287186 134287272 -68798260 - L1MC4 LINE L1 -1341 6701 6614 329 311 0 0 chr5 134287300 134287390 -68798142 + L1MC4 LINE L1 6614 6703 -1339 321 267 47 0 chr5 134287330 134287416 -68798116 - L1MC4 LINE L1 -1339 6703 6614 * 2669 109 45 18 chr5 134287422 134287439 -68798093 - MLT2A2 LTR ERVL -40 480 465 207 0 0 0 chr5 134287439 134287462 -68798070 + (TG)n Simple_repeat Simple_repeat 2 24 0 2669 109 45 18 chr5 134287462 134287848 -68797684 - MLT2A2 LTR ERVL -55 465 5 2007 122 0 39 chr5 134289644 134289955 -68795577 - AluSx SINE Alu 0 312 14 228 303 8 0 chr5 134290519 134290641 -68794891 + (TA)n Simple_repeat Simple_repeat 1 123 0 200 94 31 0 chr5 134292984 134293016 -68792516 + (CCA)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr5 134295032 134295053 -68790479 + AT_rich Low_complexity Low_complexity 1 21 0 270 106 0 0 chr5 134295383 134295430 -68790102 + (TA)n Simple_repeat Simple_repeat 2 48 0 41630 41 26 2 chr5 134296039 134302045 -68783487 + L1PA3 LINE L1 3 6155 0 760 176 11 74 chr5 134303169 134303345 -68782187 + FAM SINE Alu 1 165 -10 613 242 78 14 chr5 134303981 134304200 -68781332 - L1MC4 LINE L1 -2289 5519 5287 348 137 24 57 chr5 134304920 134305044 -68780488 + (CATATA)n Simple_repeat Simple_repeat 1 120 0 28 71 0 0 chr5 134305048 134305104 -68780428 + AT_rich Low_complexity Low_complexity 1 56 0 320 287 90 58 chr5 134305127 134305315 -68780217 - HAL1 LINE L1 -1679 828 635 803 201 45 6 chr5 134305491 134305670 -68779862 - MER5A DNA MER1_type -3 186 1 1187 202 53 100 chr5 134305822 134306183 -68779349 - MLT1A1 LTR MaLR -21 344 1 181 269 0 19 chr5 134306486 134306538 -68778994 + MIR SINE MIR 208 258 -4 658 306 38 26 chr5 134306604 134306869 -68778663 + LTR40a LTR ERVL 252 519 0 387 60 0 0 chr5 134307128 134307178 -68778354 + (CA)n Simple_repeat Simple_repeat 1 50 0 725 189 71 57 chr5 134309465 134309677 -68775855 - MER20 DNA MER1_type -4 215 1 23 0 0 0 chr5 134310595 134310618 -68774914 + AT_rich Low_complexity Low_complexity 1 23 0 36 0 0 0 chr5 134310882 134310918 -68774614 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 134311712 134311742 -68773790 + AT_rich Low_complexity Low_complexity 1 30 0 29935 35 3 2 chr5 134313014 134317475 -68768057 - L1PA4 LINE L1 -3 6152 1689 2026 168 36 5 chr5 134318094 134318482 -68767050 - L1MA4 LINE L1 -22 6278 5879 226 240 0 0 chr5 134318476 134318526 -68767006 + L1MA4 LINE L1 5833 5882 -415 * 371 255 21 21 chr5 134318684 134318778 -68766754 - LTR16A LTR ERVL -10 440 347 1954 162 103 5 chr5 134318782 134319170 -68766362 - MSTA LTR MaLR -2 426 1 5122 151 6 30 chr5 134319170 134320051 -68765481 - MSTA-int LTR MaLR 0 1580 721 833 105 8 8 chr5 134320049 134320182 -68765350 - MSTA-int LTR MaLR -1517 134 2 * 1831 157 87 20 chr5 134320183 134320584 -68764948 - MSTA LTR MaLR 0 428 1 514 269 50 19 chr5 134320584 134320744 -68764788 - LTR16A LTR ERVL -102 348 184 23 86 0 0 chr5 134321166 134321224 -68764308 + AT_rich Low_complexity Low_complexity 1 58 0 31 58 0 0 chr5 134321458 134321510 -68764022 + AT_rich Low_complexity Low_complexity 1 52 0 447 347 61 14 chr5 134323565 134323978 -68761554 - LTR33 LTR ERVL -28 493 19 702 224 66 0 chr5 134324276 134324472 -68761060 - MLT1B LTR MaLR -1 389 181 263 189 0 14 chr5 134324474 134324548 -68760984 + GA-rich Low_complexity Low_complexity 2 74 0 673 166 29 14 chr5 134324564 134324703 -68760829 - FLAM_C SINE Alu -2 141 1 404 218 75 53 chr5 134324708 134324841 -68760691 - MLT1B LTR MaLR -219 171 36 22 56 0 0 chr5 134324920 134324956 -68760576 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 134325248 134325284 -68760248 + AT_rich Low_complexity Low_complexity 1 36 0 441 289 121 20 chr5 134325293 134325542 -68759990 - L1M4 LINE L1 -3200 2946 2673 265 246 53 59 chr5 134325550 134325737 -68759795 + L1ME3A LINE L1 5763 5948 -222 219 69 0 0 chr5 134326008 134326037 -68759495 + (CA)n Simple_repeat Simple_repeat 2 30 0 325 213 37 37 chr5 134326097 134326205 -68759327 + L1MCa LINE L1 28 135 -6291 3790 188 64 7 chr5 134326212 134326693 -68758839 + L1MCa LINE L1 339 886 -5540 216 97 0 0 chr5 134326693 134326724 -68758808 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3790 188 64 7 chr5 134326724 134327052 -68758480 + L1MCa LINE L1 886 1194 -5232 4474 243 47 5 chr5 134327160 134328493 -68757039 + L1M4 LINE L1 2658 4046 -2100 253 294 216 28 chr5 134379226 134379481 -68706051 + MER102a DNA MER1_type 25 327 -3 23 54 0 0 chr5 134381097 134381134 -68704398 + AT_rich Low_complexity Low_complexity 1 37 0 1476 194 39 11 chr5 134381346 134381625 -68703907 + AluJb SINE Alu 1 287 -25 661 262 48 24 chr5 134381995 134382201 -68703331 + MIR SINE MIR 3 213 -49 2247 104 0 3 chr5 134382906 134383213 -68702319 - AluSc SINE Alu -3 306 1 22 0 0 0 chr5 134383942 134383964 -68701568 + AT_rich Low_complexity Low_complexity 1 22 0 653 296 45 9 chr5 134384541 134384761 -68700771 - MIR SINE MIR -29 233 6 22 0 0 0 chr5 134385829 134385851 -68699681 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 134387232 134387275 -68698257 + AT_rich Low_complexity Low_complexity 1 43 0 22 80 0 0 chr5 134387510 134387560 -68697972 + AT_rich Low_complexity Low_complexity 1 50 0 622 154 0 44 chr5 134389216 134389398 -68696134 + CT-rich Low_complexity Low_complexity 2 175 0 25 31 0 0 chr5 134390318 134390350 -68695182 + AT_rich Low_complexity Low_complexity 1 32 0 567 291 125 33 chr5 134390410 134391074 -68694458 - L1ME3 LINE L1 -306 5856 5128 22 0 0 0 chr5 134391105 134391127 -68694405 + AT_rich Low_complexity Low_complexity 1 22 0 639 346 101 37 chr5 134391143 134391904 -68693628 - L1ME3 LINE L1 -1059 5087 4281 2051 228 50 11 chr5 134393256 134393699 -68691833 - MLT1C LTR MaLR -7 460 1 552 215 18 55 chr5 134393745 134393908 -68691624 + L1MA10 LINE L1 6174 6330 -4 447 35 0 0 chr5 134393908 134393965 -68691567 + (CA)n Simple_repeat Simple_repeat 2 58 0 1368 289 44 42 chr5 134393967 134394088 -68691444 + L1ME3A LINE L1 5462 5581 -589 3092 108 11 83 chr5 134394088 134394303 -68691229 + L1PA13 LINE L1 5594 5823 -340 234 0 0 0 chr5 134394303 134394329 -68691203 + (CA)n Simple_repeat Simple_repeat 1 26 0 3092 108 11 83 chr5 134394329 134394727 -68690805 + L1PA13 LINE L1 5823 6163 0 1368 289 44 42 chr5 134394727 134394793 -68690739 + L1ME3A LINE L1 5581 5645 -525 1884 170 37 3 chr5 134394793 134395146 -68690386 + MER47A DNA MER2_type 1 365 -1 1368 289 44 42 chr5 134395146 134395598 -68689934 + L1ME3A LINE L1 5645 6103 -67 211 323 105 38 chr5 134396014 134396147 -68689385 - MIR SINE MIR -115 147 6 22 0 0 0 chr5 134396181 134396203 -68689329 + AT_rich Low_complexity Low_complexity 1 22 0 186 286 71 14 chr5 134396238 134396308 -68689224 + L2 LINE L2 3238 3311 -2 360 0 0 0 chr5 134396336 134396376 -68689156 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr5 134396473 134396496 -68689036 + AT_rich Low_complexity Low_complexity 1 23 0 1038 255 120 16 chr5 134397467 134397843 -68687689 - MER47B DNA MER2_type 0 418 4 182 150 25 0 chr5 134398266 134398306 -68687226 + GA-rich Low_complexity Low_complexity 4 44 0 1294 186 22 47 chr5 134402096 134402371 -68683161 + AluJo SINE Alu 13 280 -32 216 0 0 0 chr5 134402401 134402425 -68683107 + (TG)n Simple_repeat Simple_repeat 2 25 0 1613 196 63 11 chr5 134403536 134403883 -68681649 - MLT1A1 LTR MaLR 0 365 1 222 318 40 8 chr5 134404605 134404731 -68680801 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 21 36 0 0 chr5 134405399 134405427 -68680105 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr5 134405639 134405670 -68679862 + AT_rich Low_complexity Low_complexity 1 31 0 1826 195 6 8 chr5 134405810 134406164 -68679368 + MLT1A1 LTR MaLR 1 353 -12 26 30 0 0 chr5 134406177 134406210 -68679322 + AT_rich Low_complexity Low_complexity 1 33 0 414 177 52 0 chr5 134408460 134408556 -68676976 - L1MCc LINE L1 -3433 3508 3408 867 306 107 41 chr5 134408567 134409996 -68675536 - L1MCc LINE L1 -4442 2680 956 238 315 11 22 chr5 134410562 134410654 -68674878 - L1MCc LINE L1 -5361 1062 972 631 324 53 25 chr5 134410703 134411101 -68674431 - L1MCc LINE L1 -5953 470 62 1793 40 0 4 chr5 134411318 134411544 -68673988 - L1PA4 LINE L1 0 6155 5931 3041 20 0 0 chr5 134411544 134411891 -68673641 + L1P2 LINE L1 5436 5782 -373 1086 272 120 5 chr5 134412445 134413009 -68672523 - L1ME3A LINE L1 -200 5970 5304 293 62 21 0 chr5 134413009 134413057 -68672475 + (TG)n Simple_repeat Simple_repeat 1 49 0 1086 272 120 5 chr5 134413057 134413097 -68672435 - L1ME3A LINE L1 -866 5304 5270 801 335 42 13 chr5 134413100 134413490 -68672042 - LTR16A LTR ERVL 0 450 51 198 103 0 0 chr5 134413517 134413546 -68671986 + (CATA)n Simple_repeat Simple_repeat 3 31 0 637 301 85 18 chr5 134413546 134413981 -68671551 - L1ME3A LINE L1 -914 5232 4769 334 290 32 19 chr5 134414192 134414347 -68671185 + L1MC4 LINE L1 7797 7953 -89 21 36 0 0 chr5 134415059 134415087 -68670445 + AT_rich Low_complexity Low_complexity 1 28 0 3992 118 23 2 chr5 134415087 134415732 -68669800 - L1MA2 LINE L1 0 6304 5646 24 77 0 0 chr5 134416056 134416108 -68669424 + AT_rich Low_complexity Low_complexity 1 52 0 180 0 0 0 chr5 134416849 134416869 -68668663 + (TTTTTA)n Simple_repeat Simple_repeat 1 20 0 7596 23 0 0 chr5 134416869 134418465 -68667067 - L1PA3 LINE L1 0 6155 4560 251 234 65 0 chr5 134418465 134418542 -68666990 + MER92A LTR ERV1 252 333 -79 1888 214 181 60 chr5 134418929 134419666 -68665866 + LTR1B LTR ERV1 1 826 0 1266 247 47 30 chr5 134419869 134420274 -68665258 - MER92A LTR ERV1 0 412 1 24 32 0 0 chr5 134421066 134421097 -68664435 + AT_rich Low_complexity Low_complexity 1 31 0 335 295 40 60 chr5 134422621 134422821 -68662711 - L2 LINE L2 0 3313 3118 199 379 83 0 chr5 134422999 134423131 -68662401 - L2 LINE L2 -265 3048 2906 1062 207 13 4 chr5 134423133 134423370 -68662162 - L1PA16 LINE L1 -1462 4684 4446 * 1835 215 11 17 chr5 134423365 134423825 -68661707 + L1PA16 LINE L1 4664 5120 -1026 1301 130 0 0 chr5 134423825 134424009 -68661523 + THE1B LTR MaLR 1 184 -180 11796 154 23 26 chr5 134424019 134426175 -68659357 + L1P3 LINE L1 10 2172 -4289 2254 65 0 0 chr5 134426175 134426452 -68659080 + AluY SINE Alu 35 311 0 11796 154 23 26 chr5 134426452 134426679 -68658853 + L1P3 LINE L1 2172 2398 -4063 1917 129 3 7 chr5 134426679 134426973 -68658559 + AluSg SINE Alu 1 293 -17 11796 154 23 26 chr5 134426973 134427831 -68657701 + L1P3 LINE L1 2398 3259 -3202 6151 101 7 8 chr5 134427840 134429220 -68656312 + L1PA8 LINE L1 4783 6166 -6 892 116 86 96 chr5 134429220 134429408 -68656124 + THE1B LTR MaLR 177 364 0 10520 127 17 0 chr5 134429408 134430961 -68654571 + THE1B-int LTR MaLR 1 1580 0 2059 130 38 49 chr5 134430961 134431329 -68654203 + THE1B LTR MaLR 1 364 0 4232 179 44 24 chr5 134431329 134432317 -68653215 + L1PA16 LINE L1 5116 6131 -35 215 228 0 0 chr5 134432317 134432374 -68653158 + A-rich Low_complexity Low_complexity 1 57 0 432 289 43 85 chr5 134432613 134432690 -68652842 + L1MD3 LINE L1 2 81 -5964 2395 28 7 3 chr5 134432690 134432977 -68652555 - AluY SINE Alu -8 303 16 432 289 43 85 chr5 134432977 134433321 -68652211 + L1MD3 LINE L1 81 405 -5640 1661 278 108 53 chr5 134433552 134435100 -68650432 + L1MD3 LINE L1 445 2091 -4473 392 214 116 0 chr5 134435102 134435214 -68650318 + L1MD3 LINE L1 2949 3073 -3491 * 1309 267 40 21 chr5 134435209 134435689 -68649843 + L1MD3 LINE L1 5246 5734 -830 2087 129 8 29 chr5 134435715 134436274 -68649258 - MER51A LTR ERV1 0 634 2 4863 223 81 96 chr5 134436277 134437351 -68648181 + L1MD3 LINE L1 6163 7251 -1162 2497 128 117 4 chr5 134437351 134437821 -68647711 - L1MA2 LINE L1 0 6304 5782 4863 223 81 96 chr5 134437821 134438887 -68646645 + L1MD3 LINE L1 7251 8271 -142 2445 54 0 0 chr5 134438887 134439182 -68646350 + AluY SINE Alu 17 311 0 4863 223 81 96 chr5 134439182 134439310 -68646222 + L1MD3 LINE L1 8271 8399 -14 10662 34 2 2 chr5 134439477 134441550 -68643982 - L1PA4 LINE L1 0 6155 4084 1330 230 130 84 chr5 134441794 134442808 -68642724 - L1ME2 LINE L1 -10 6154 5077 21 0 0 0 chr5 134443816 134443837 -68641695 + AT_rich Low_complexity Low_complexity 1 21 0 231 189 0 0 chr5 134443837 134443890 -68641642 + (CA)n Simple_repeat Simple_repeat 2 54 0 405 273 130 0 chr5 134444231 134444385 -68641147 + L1M4c LINE L1 1429 1602 -4782 874 146 0 0 chr5 134444388 134444525 -68641007 - Tigger1 DNA MER2_type -1584 834 698 2702 10 0 0 chr5 134444525 134444822 -68640710 - AluY SINE Alu -4 307 11 7648 218 65 57 chr5 134444823 134447351 -68638181 + L1MA9 LINE L1 2735 5280 -866 3549 231 34 21 chr5 134447357 134448288 -68637244 + L1MA9 LINE L1 5332 6274 -38 1479 194 107 122 chr5 134448605 134449038 -68636494 + MLT2B1 LTR ERVL 3 428 -92 191 36 36 0 chr5 134449038 134449066 -68636466 + (CA)n Simple_repeat Simple_repeat 1 29 0 1479 194 107 122 chr5 134449066 134449158 -68636374 + MLT2B1 LTR ERVL 428 520 0 279 93 0 0 chr5 134449183 134449226 -68636306 + (TG)n Simple_repeat Simple_repeat 1 43 0 334 317 13 21 chr5 134450541 134450717 -68634815 - L1M3a LINE L1 -5298 657 317 2563 168 13 2 chr5 134450740 134451204 -68634328 + L1M2 LINE L1 5319 5787 -525 846 182 41 6 chr5 134451201 134451371 -68634161 + L1MA9 LINE L1 5605 5780 -532 * 289 163 0 0 chr5 134451387 134451436 -68634096 - L1M2 LINE L1 -426 5865 5817 1200 173 23 31 chr5 134451510 134451770 -68633762 + L1MA9 LINE L1 5782 6039 -273 7414 96 4 3 chr5 134451996 134453854 -68631678 - L1PA7 LINE L1 -1 6153 4292 1258 185 25 7 chr5 134453871 134454152 -68631380 + L1MA9 LINE L1 6027 6312 0 1508 317 35 26 chr5 134457635 134458354 -68627178 + L1MEc LINE L1 61 785 -5611 1491 178 117 10 chr5 134458364 134458673 -68626859 + MLT1A1 LTR MaLR 21 362 -3 876 229 21 84 chr5 134458674 134459101 -68626431 + L1MEc LINE L1 784 1183 -5213 1726 254 62 20 chr5 134459122 134459571 -68625961 + MLT1F1 LTR MaLR 17 484 -83 358 182 0 13 chr5 134459581 134459658 -68625874 - L1MEc LINE L1 -5608 788 713 954 337 13 13 chr5 134459685 134460077 -68625455 - L1MEc LINE L1 -5761 635 244 1155 284 86 13 chr5 134460091 134460555 -68624977 + L1ME3A LINE L1 5609 6106 -64 911 315 69 5 chr5 134460929 134461319 -68624213 - LTR16C LTR ERVL -1 490 76 404 273 19 6 chr5 134461442 134461603 -68623929 - HAL1b LINE L1 -224 1124 962 15490 234 44 15 chr5 134461797 134467779 -68617753 - L1P4 LINE L1 -691 6125 1 1721 119 4 23 chr5 134467913 134468174 -68617358 - AluSx SINE Alu -20 292 37 1461 208 0 40 chr5 134468202 134468505 -68617027 + AluJb SINE Alu 1 291 -21 473 323 96 47 chr5 134468596 134468918 -68616614 - L2 LINE L2 -6 3307 2970 283 331 23 17 chr5 134469208 134469383 -68616149 + HAL1b LINE L1 108 283 -1065 416 345 134 49 chr5 134469438 134471031 -68614501 + L2 LINE L2 865 2592 -722 373 330 107 30 chr5 134471735 134471968 -68613564 - MIR SINE MIR -1 261 11 21 0 0 0 chr5 134472032 134472053 -68613479 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr5 134472649 134472699 -68612833 + AT_rich Low_complexity Low_complexity 1 50 0 244 284 110 37 chr5 134473386 134473495 -68612037 - MIR SINE MIR 0 262 146 2298 118 8 8 chr5 134473821 134474176 -68611356 - THE1A LTR MaLR 0 355 1 10585 116 15 9 chr5 134474176 134475748 -68609784 - THE1A-int LTR MaLR 0 1580 1 2264 122 32 9 chr5 134475750 134476095 -68609437 - THE1A LTR MaLR -2 353 1 2284 94 0 0 chr5 134476647 134476944 -68608588 - AluY SINE Alu -10 301 5 24 32 0 0 chr5 134477207 134477238 -68608294 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr5 134478180 134478218 -68607314 + AT_rich Low_complexity Low_complexity 1 38 0 10104 30 3 0 chr5 134478418 134479629 -68605903 + L1P LINE L1 3833 5047 -1099 709 209 0 0 chr5 134479643 134479777 -68605755 - L1MA4 LINE L1 -646 5658 5525 3126 170 41 3 chr5 134479777 134480384 -68605148 + L1MA4 LINE L1 5657 6291 -9 430 330 135 16 chr5 134480484 134480869 -68604663 + L1M4 LINE L1 4481 4911 -1235 24 32 0 0 chr5 134480907 134480938 -68604594 + AT_rich Low_complexity Low_complexity 1 31 0 338 245 54 48 chr5 134481071 134481218 -68604314 + L1MCc LINE L1 122 269 -6154 225 337 57 34 chr5 134481345 134481520 -68604012 - LTR67 LTR ERVL -7 550 372 25 31 0 0 chr5 134482255 134482287 -68603245 + AT_rich Low_complexity Low_complexity 1 32 0 229 179 54 18 chr5 134483171 134483227 -68602305 - MER92C LTR ERV1 -3 551 494 750 224 109 9 chr5 134483350 134483560 -68601972 - MER67C LTR ERV1 -335 375 145 2012 100 0 0 chr5 134483566 134483836 -68601696 + AluSq SINE Alu 42 311 -2 1537 156 4 4 chr5 134483864 134484120 -68601412 + AluSx SINE Alu 53 308 -4 583 175 0 158 chr5 134484208 134484391 -68601141 - MER67D LTR ERV1 -357 157 4 791 201 12 6 chr5 134484684 134484848 -68600684 + LTR51 LTR ERV1 507 671 0 2076 135 23 9 chr5 134485194 134485542 -68599990 + THE1A LTR MaLR 1 353 -2 10819 105 23 3 chr5 134485544 134487093 -68598439 + THE1A-int LTR MaLR 1 1580 0 2171 130 8 8 chr5 134487093 134487448 -68598084 + THE1A LTR MaLR 1 355 0 22 70 0 0 chr5 134487661 134487704 -68597828 + AT_rich Low_complexity Low_complexity 1 43 0 379 108 36 36 chr5 134487891 134488002 -68597530 + (TA)n Simple_repeat Simple_repeat 2 112 0 42 20 0 0 chr5 134488099 134488148 -68597384 + AT_rich Low_complexity Low_complexity 1 49 0 306 333 94 36 chr5 134488263 134488455 -68597077 + MIR SINE MIR 56 258 -4 296 272 48 19 chr5 134490203 134490306 -68595226 - MIR SINE MIR -75 187 82 1798 205 18 91 chr5 134490310 134490872 -68594660 + LTR8 LTR ERV1 1 521 -170 5995 95 32 4 chr5 134491063 134492274 -68593258 - L1PA13 LINE L1 -14 6149 4919 730 275 6 6 chr5 134492275 134492457 -68593075 + LTR8 LTR ERV1 510 691 0 996 257 85 40 chr5 134493650 134494261 -68591271 - MER65-int LTR ERV1 -1060 4963 3351 756 170 17 72 chr5 134494289 134494524 -68591008 - MER65-int LTR ERV1 -2646 3952 3731 647 188 25 71 chr5 134494612 134494809 -68590723 - MER65-int LTR ERV1 -2866 3732 3545 231 319 35 9 chr5 134495282 134495395 -68590137 - MER101B LTR ERV1 -251 319 204 620 220 48 60 chr5 134495547 134495797 -68589735 - MER65-int LTR ERV1 -3055 1816 1570 726 281 30 25 chr5 134495797 134496110 -68589422 - MER34 LTR ERV1 -162 380 34 1301 252 46 60 chr5 134497004 134497500 -68588032 - MER65B LTR ERV1 -42 489 1 265 192 110 0 chr5 134497883 134497956 -68587576 - MLT1I LTR MaLR -17 392 312 401 0 20 0 chr5 134497985 134498034 -68587498 + (TG)n Simple_repeat Simple_repeat 1 50 0 405 0 0 0 chr5 134498085 134498130 -68587402 + (TA)n Simple_repeat Simple_repeat 1 45 0 1921 114 83 31 chr5 134498218 134498568 -68586964 - L1MA3 LINE L1 -350 5955 5588 24 77 0 0 chr5 134498589 134498641 -68586891 + AT_rich Low_complexity Low_complexity 1 52 0 198 71 0 0 chr5 134498828 134498856 -68586676 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2108 125 0 0 chr5 134498939 134499235 -68586297 + AluSx SINE Alu 1 296 -16 34 84 0 0 chr5 134499320 134499403 -68586129 + AT_rich Low_complexity Low_complexity 1 83 0 1288 251 106 20 chr5 134500342 134500748 -68584784 + LTR16B LTR ERVL 1 441 -23 25 31 0 0 chr5 134501261 134501293 -68584239 + AT_rich Low_complexity Low_complexity 1 32 0 30 45 0 0 chr5 134502322 134502366 -68583166 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 134502450 134502479 -68583053 + AT_rich Low_complexity Low_complexity 1 29 0 1276 234 38 54 chr5 134502665 134503037 -68582495 - MLT1A2 LTR MaLR -8 366 1 2874 271 88 30 chr5 134503045 134504226 -68581306 - MLT1A2-int LTR MaLR -2 1369 1 1198 231 79 25 chr5 134504226 134504581 -68580951 - MLT1A2 LTR MaLR 0 374 1 1107 182 10 15 chr5 134504869 134505395 -68580137 + L1MC1 LINE L1 5128 5751 -582 1381 164 137 0 chr5 134505395 134505658 -68579874 + L1MC1 LINE L1 6010 6308 -25 954 253 136 96 chr5 134505711 134506232 -68579300 - MLT1F LTR MaLR 0 542 1 1163 187 0 0 chr5 134506884 134507087 -68578445 + AluJb SINE Alu 95 297 -15 356 289 47 74 chr5 134507651 134507800 -68577732 + MIR SINE MIR 29 173 -89 210 118 0 0 chr5 134507931 134507965 -68577567 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 199 378 42 8 chr5 134508183 134508302 -68577230 - L2 LINE L2 -216 3056 2934 237 155 0 0 chr5 134509254 134509312 -68576220 + A-rich Low_complexity Low_complexity 1 58 0 28 48 0 0 chr5 134509713 134509755 -68575777 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr5 134510537 134510565 -68574967 + AT_rich Low_complexity Low_complexity 1 28 0 1978 240 42 14 chr5 134510727 134511301 -68574231 - L1M4 LINE L1 -1745 4401 3812 42 36 0 0 chr5 134511520 134511576 -68573956 + AT_rich Low_complexity Low_complexity 1 56 0 636 322 85 40 chr5 134511704 134512126 -68573406 - L2 LINE L2 -5 3308 2868 952 287 191 25 chr5 134513435 134513916 -68571616 - L2 LINE L2 -635 2679 2119 22 0 0 0 chr5 134514056 134514078 -68571454 + AT_rich Low_complexity Low_complexity 1 22 0 279 197 42 0 chr5 134514706 134514777 -68570755 + (TG)n Simple_repeat Simple_repeat 2 75 0 2412 24 0 7 chr5 134515182 134515473 -68570059 - L1PA2 LINE L1 -3 6152 5864 337 307 43 106 chr5 134515543 134515872 -68569660 + L2 LINE L2 2965 3272 0 26 0 0 0 chr5 134516331 134516357 -68569175 + AT_rich Low_complexity Low_complexity 1 26 0 612 75 0 0 chr5 134516435 134516515 -68569017 - MADE1 DNA Mariner 0 80 1 595 330 76 53 chr5 134517134 134517700 -68567832 - L1ME LINE L1 -5467 603 25 4032 260 39 9 chr5 134517813 134519076 -68566456 - L1PA13 LINE L1 -2896 3901 2602 2673 122 46 0 chr5 134519079 134519118 -68566414 - MLT2A1 LTR ERVL -8 436 400 318 50 0 0 chr5 134519118 134519158 -68566374 + (TG)n Simple_repeat Simple_repeat 1 40 0 2673 122 46 0 chr5 134519158 134519535 -68565997 - MLT2A1 LTR ERVL -44 400 1 4671 240 54 15 chr5 134519535 134521086 -68564446 - L1PA13 LINE L1 -4190 2607 989 237 167 21 0 chr5 134521769 134521817 -68563715 - L1PA15-16 LINE L1 -3935 2914 2866 220 269 0 26 chr5 134521930 134522008 -68563524 + CT-rich Low_complexity Low_complexity 2 77 0 4821 168 107 12 chr5 134522153 134523084 -68562448 + LTR28 LTR ERV1 1 1020 0 2614 102 3 0 chr5 134523540 134523894 -68561638 + THE1A LTR MaLR 1 355 0 229 304 80 54 chr5 134524695 134524807 -68560725 - L2 LINE L2 0 3272 3158 1908 100 27 0 chr5 134525783 134526044 -68559488 + THE1C LTR MaLR 1 268 -107 330 207 24 0 chr5 134526046 134526128 -68559404 + L1MA10 LINE L1 6249 6332 -2 1014 293 85 30 chr5 134526262 134527220 -68558312 - L1MEc LINE L1 -2272 3943 2934 239 322 98 31 chr5 134527238 134527779 -68557753 - L1MEc LINE L1 -3323 2892 2316 315 271 86 86 chr5 134527929 134528221 -68557311 - L1MEc LINE L1 -4259 2137 1846 278 341 38 23 chr5 134529014 134529146 -68556386 + MIR SINE MIR 77 210 -52 206 220 0 160 chr5 134530598 134530643 -68554889 - MIR SINE MIR -130 132 110 552 90 0 0 chr5 134530643 134530721 -68554811 + MADE1 DNA Mariner 1 78 -2 206 220 0 160 chr5 134530721 134530775 -68554757 - MIR SINE MIR -152 110 49 1062 195 91 0 chr5 134530988 134531066 -68554466 + AluJb SINE Alu 44 114 -199 231 36 0 0 chr5 134531066 134531094 -68554438 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1062 195 91 0 chr5 134531094 134531265 -68554267 + AluJb SINE Alu 114 313 0 278 263 51 25 chr5 134531372 134531490 -68554042 + L1ME4a LINE L1 5988 6108 -13 5107 60 3 0 chr5 134531619 134532266 -68553266 - L1PA7 LINE L1 -11 6143 5495 266 326 43 0 chr5 134532295 134532387 -68553145 + MIR SINE MIR 153 248 -14 2434 101 18 52 chr5 134534362 134534750 -68550782 + THE1C LTR MaLR 1 375 0 4261 129 53 71 chr5 134534752 134535555 -68549977 + THE1C-int LTR MaLR 3 791 -789 608 117 43 0 chr5 134535557 134535651 -68549881 + THE1C LTR MaLR 278 375 0 223 96 39 0 chr5 134536709 134536761 -68548771 + (TA)n Simple_repeat Simple_repeat 2 55 0 336 287 73 20 chr5 134537081 134537328 -68548204 + L1ME LINE L1 5012 5271 -875 542 296 100 35 chr5 134537368 134537457 -68548075 + L1ME LINE L1 5442 5524 -646 2137 136 0 0 chr5 134537457 134537759 -68547773 - AluSx SINE Alu -10 302 1 542 296 100 35 chr5 134537759 134537980 -68547552 + L1ME LINE L1 5524 5772 -398 2116 276 40 45 chr5 134538003 134538065 -68547467 + L1MD2 LINE L1 3637 3698 -2448 2150 128 3 0 chr5 134538065 134538370 -68547162 + AluSc SINE Alu 1 306 -3 2116 276 40 45 chr5 134538370 134539284 -68546248 + L1MD2 LINE L1 3698 4608 -1538 219 36 0 0 chr5 134539294 134539322 -68546210 + (TG)n Simple_repeat Simple_repeat 2 29 0 2919 109 17 0 chr5 134539356 134540082 -68545450 + L1PA8A LINE L1 4942 5675 -456 3320 204 28 47 chr5 134540119 134541174 -68544358 + L1MD2 LINE L1 5079 6116 -243 256 33 0 0 chr5 134541178 134541208 -68544324 - MLT2A1 LTR ERVL -8 436 407 396 59 0 0 chr5 134541208 134541259 -68544273 + (TG)n Simple_repeat Simple_repeat 1 51 0 242 28 0 28 chr5 134541270 134541306 -68544226 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 345 185 22 36 chr5 134541306 134541379 -68544153 - AluSp/q SINE Alu -29 274 210 230 330 0 11 chr5 134542158 134542246 -68543286 + (TA)n Simple_repeat Simple_repeat 2 88 0 2538 192 4 17 chr5 134542728 134543250 -68542282 - L1 LINE L1 -885 5261 4747 1987 47 8 0 chr5 134543316 134543569 -68541963 + L1PA4 LINE L1 5895 6149 -6 7203 178 35 3 chr5 134543836 134545336 -68540196 - L1 LINE L1 -1393 4753 3205 3212 174 55 63 chr5 134545336 134545614 -68539918 + L1MA9 LINE L1 5512 5791 -521 1717 156 169 0 chr5 134545614 134545980 -68539552 - MSTA LTR MaLR 0 428 1 3212 174 55 63 chr5 134545980 134546214 -68539318 + L1MA9 LINE L1 5791 6026 -286 2149 127 0 3 chr5 134546214 134546528 -68539004 + AluSq SINE Alu 1 313 0 3212 174 55 63 chr5 134546528 134546822 -68538710 + L1MA9 LINE L1 6026 6312 0 2313 83 3 10 chr5 134547096 134547409 -68538123 + AluY SINE Alu 1 311 0 24 85 0 0 chr5 134547658 134547717 -68537815 + AT_rich Low_complexity Low_complexity 1 59 0 348 0 0 0 chr5 134547783 134547825 -68537707 + L1PA6 LINE L1 6109 6150 -4 23 0 0 0 chr5 134547839 134547862 -68537670 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr5 134547903 134547950 -68537582 + AT_rich Low_complexity Low_complexity 1 47 0 209 122 24 0 chr5 134548698 134548739 -68536793 + A-rich Low_complexity Low_complexity 3 44 0 765 163 52 6 chr5 134549137 134549309 -68536223 - ORSL DNA AcHobo -27 248 69 2122 121 0 3 chr5 134550020 134550333 -68535199 + AluSx SINE Alu 1 312 0 233 105 26 0 chr5 134550939 134550977 -68534555 + MLT1G LTR MaLR 551 589 -1 371 181 0 0 chr5 134551099 134551171 -68534361 - MLT1D LTR MaLR -175 330 259 1528 84 19 0 chr5 134551310 134551523 -68534009 - L1PA7 LINE L1 -8 6146 5930 764 217 49 27 chr5 134551524 134551708 -68533824 - MLT1D LTR MaLR -317 188 1 4293 184 33 19 chr5 134552271 134553118 -68532414 + MER6 DNA MER2_type 1 859 -6 26 0 0 0 chr5 134553349 134553375 -68532157 + AT_rich Low_complexity Low_complexity 1 26 0 7428 27 7 1 chr5 134555878 134557523 -68528009 + L1PA4 LINE L1 4506 6155 0 22 0 0 0 chr5 134557600 134557622 -68527910 + AT_rich Low_complexity Low_complexity 1 22 0 223 314 63 57 chr5 134558374 134558549 -68526983 - MER5B DNA MER1_type -1 177 2 736 273 21 0 chr5 134559759 134559953 -68525579 + MER63A DNA MER1_type 13 210 0 1278 260 166 20 chr5 134560052 134560538 -68524994 + MLT1E LTR MaLR 13 653 -1 437 255 181 0 chr5 134560538 134560687 -68524845 - MIR SINE MIR -12 250 75 23 68 0 0 chr5 134561774 134561818 -68523714 + AT_rich Low_complexity Low_complexity 1 44 0 233 141 113 42 chr5 134562799 134562870 -68522662 - MLT1D LTR MaLR -6 499 424 24 0 0 0 chr5 134563380 134563404 -68522128 + AT_rich Low_complexity Low_complexity 1 24 0 372 278 21 7 chr5 134563628 134563772 -68521760 + L1M4 LINE L1 2786 2931 -3215 369 0 0 0 chr5 134563811 134563852 -68521680 + (TG)n Simple_repeat Simple_repeat 2 42 0 773 332 40 32 chr5 134564026 134564402 -68521130 + L2 LINE L2 2376 2754 -560 356 294 159 62 chr5 134564401 134564741 -68520791 + L2 LINE L2 2940 3312 -1 * 255 254 113 21 chr5 134564780 134564922 -68520610 - L1M4 LINE L1 -2642 3504 3350 760 272 65 31 chr5 134565029 134565477 -68520055 - L1M4 LINE L1 -3005 3141 2679 281 283 60 33 chr5 134565902 134566086 -68519446 - L1M4 LINE L1 -1280 4866 4678 1320 334 36 49 chr5 134566088 134566994 -68518538 + L1ME LINE L1 17 911 -5512 40 21 0 0 chr5 134567270 134567317 -68518215 + AT_rich Low_complexity Low_complexity 1 47 0 400 259 88 6 chr5 134567317 134567487 -68518045 + L1ME LINE L1 4939 5122 -1819 * 1435 257 85 26 chr5 134567479 134567794 -68517738 + L1ME LINE L1 5426 5721 -1240 276 30 0 0 chr5 134567794 134567827 -68517705 + (TA)n Simple_repeat Simple_repeat 1 33 0 1435 257 85 26 chr5 134567827 134568386 -68517146 + L1ME LINE L1 5721 6348 -613 242 407 52 7 chr5 134570783 134570833 -68514699 + L2 LINE L2 3116 3162 -110 216 0 0 0 chr5 134570833 134570857 -68514675 + (TTA)n Simple_repeat Simple_repeat 1 24 0 242 407 52 7 chr5 134570857 134570941 -68514591 + L2 LINE L2 3162 3256 -16 325 279 109 14 chr5 134571084 134571231 -68514301 + LTR16A1 LTR ERVL 247 407 -50 23 33 0 0 chr5 134572071 134572101 -68513431 + AT_rich Low_complexity Low_complexity 1 30 0 297 271 28 28 chr5 134572508 134572615 -68512917 - MLT1H LTR MaLR 0 549 443 1559 103 0 5 chr5 134572738 134572951 -68512581 - AluSx SINE Alu -11 301 90 2947 125 14 26 chr5 134572970 134573465 -68512067 - LTR22B LTR ERVK -3 489 1 555 168 0 0 chr5 134573465 134573560 -68511972 - AluSx SINE Alu -218 95 1 315 365 95 0 chr5 134573562 134573773 -68511759 - MLT1H LTR MaLR -252 297 67 25 0 0 0 chr5 134574771 134574796 -68510736 + AT_rich Low_complexity Low_complexity 1 25 0 1074 249 41 51 chr5 134575091 134575485 -68510047 + MLT1B LTR MaLR 1 390 0 304 260 114 24 chr5 134575601 134575724 -68509808 - MER103 DNA DNA -1 165 32 24 0 0 0 chr5 134575746 134575770 -68509762 + AT_rich Low_complexity Low_complexity 1 24 0 2724 275 95 28 chr5 134576960 134577558 -68507974 + L1MCc LINE L1 1225 1782 -5340 6689 38 12 1 chr5 134577558 134578385 -68507147 + L1PA4 LINE L1 5318 6153 -2 2724 275 95 28 chr5 134578385 134579186 -68506346 + L1MCc LINE L1 1782 2739 -4383 1714 148 3 68 chr5 134579186 134579510 -68506022 - AluSq SINE Alu -10 303 1 2724 275 95 28 chr5 134579510 134579647 -68505885 + L1MCc LINE L1 2739 2865 -4257 654 133 0 9 chr5 134579631 134579744 -68505788 - L1MA7 LINE L1 -141 6150 6039 * 298 270 44 58 chr5 134579889 134580154 -68505378 - L1MD2 LINE L1 -28 6156 5897 1743 116 42 80 chr5 134580274 134580585 -68504947 + AluSg SINE Alu 1 299 -11 482 321 37 15 chr5 134580950 134581218 -68504314 - L1MC4 LINE L1 -986 7056 6783 220 200 0 0 chr5 134581474 134581519 -68504013 + A-rich Low_complexity Low_complexity 2 46 0 550 161 22 79 chr5 134581614 134581757 -68503775 + MSTB2 LTR MaLR 222 338 -58 991 327 123 20 chr5 134581820 134582501 -68503031 + L1M2 LINE L1 136 877 -6332 4753 178 48 13 chr5 134582803 134584129 -68501403 + L1MA4A LINE L1 4934 6302 -1 1684 133 104 26 chr5 134584363 134584709 -68500823 - THE1C LTR MaLR -2 373 1 221 56 0 28 chr5 134584884 134584920 -68500612 + (TATG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 134584983 134585006 -68500526 + AT_rich Low_complexity Low_complexity 1 23 0 823 240 32 0 chr5 134585306 134585527 -68500005 - L1MB7 LINE L1 -78 6106 5879 * 1227 181 30 9 chr5 134585526 134585758 -68499774 - L1MB7 LINE L1 -550 5634 5398 328 123 358 25 chr5 134585925 134586006 -68499526 - AluJb SINE Alu 0 302 195 22 0 0 0 chr5 134586026 134586048 -68499484 + AT_rich Low_complexity Low_complexity 1 22 0 1921 118 10 10 chr5 134587677 134587981 -68497551 - THE1C LTR MaLR 0 375 72 575 121 9 95 chr5 134588052 134588168 -68497364 - THE1C LTR MaLR -269 106 1 317 208 0 0 chr5 134588894 134588947 -68496585 - MER45 DNA AcHobo 0 1581 1529 318 323 50 10 chr5 134589128 134589227 -68496305 + L2 LINE L2 3206 3308 -5 421 263 70 26 chr5 134590816 134590972 -68494560 + L2 LINE L2 3151 3313 0 223 399 8 15 chr5 134591010 134591143 -68494389 + L3 LINE CR1 187 318 -1259 265 318 138 32 chr5 134591293 134591510 -68494022 + MIR SINE MIR 23 262 0 610 297 59 5 chr5 134592678 134592880 -68492652 - MIR SINE MIR 0 262 50 23 0 0 0 chr5 134593854 134593877 -68491655 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 134594101 134594150 -68491382 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr5 134594185 134594206 -68491326 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 0 0 chr5 134595214 134595246 -68490286 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 229 204 0 0 chr5 134595959 134596003 -68489529 + MIR SINE MIR 217 260 -2 24 0 0 0 chr5 134596045 134596069 -68489463 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 134597909 134597934 -68487598 + AT_rich Low_complexity Low_complexity 1 25 0 253 81 0 0 chr5 134597945 134597982 -68487550 + L1 LINE L1 4550 4586 -1560 * 803 265 78 48 chr5 134597981 134598505 -68487027 + L1ME1 LINE L1 3100 3639 -2507 3146 251 74 21 chr5 134598514 134599884 -68485648 + L1P1 LINE L1 4020 5470 -685 1796 241 63 59 chr5 134599984 134600666 -68484866 + L1ME1 LINE L1 5477 6161 -5 6956 31 2 0 chr5 134601130 134602107 -68483425 - L1P1 LINE L1 -631 5524 4546 3991 45 35 4 chr5 134602107 134602629 -68482903 + L1PA3 LINE L1 5626 6155 0 433 148 53 15 chr5 134602632 134602745 -68482787 - L1PA13 LINE L1 -252 5899 5786 1578 102 4 0 chr5 134602745 134602971 -68482561 + L1PA13 LINE L1 5931 6157 -6 21 36 0 0 chr5 134603125 134603153 -68482379 + AT_rich Low_complexity Low_complexity 1 28 0 2347 126 11 16 chr5 134604803 134605177 -68480355 + THE1C LTR MaLR 4 375 0 9815 120 15 60 chr5 134605178 134606832 -68478700 + THE1C-int LTR MaLR 2 1580 0 2141 125 50 17 chr5 134606834 134607195 -68478337 + THE1C LTR MaLR 3 375 0 1582 208 22 48 chr5 134607466 134607502 -68478030 + MLT1A1 LTR MaLR 13 48 -317 1872 150 3 10 chr5 134607502 134607808 -68477724 - AluSc SINE Alu -5 304 1 1582 208 22 48 chr5 134607808 134608127 -68477405 + MLT1A1 LTR MaLR 48 359 -6 206 360 76 48 chr5 134608429 134608862 -68476670 - L2 LINE L2 -588 2726 2282 512 326 26 37 chr5 134609419 134609796 -68475736 - L1ME LINE L1 -454 5708 5336 194 224 28 9 chr5 134609963 134610070 -68475462 + (TA)n Simple_repeat Simple_repeat 2 110 0 233 29 0 29 chr5 134611300 134611335 -68474197 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3035 41 3 0 chr5 134611335 134611704 -68473828 - L1PA5 LINE L1 -16 6138 5769 716 302 82 9 chr5 134611992 134612320 -68473212 + L1MCc LINE L1 17 368 -6055 531 278 46 6 chr5 134612416 134612589 -68472943 + L1MCc LINE L1 297 476 -5947 187 197 0 42 chr5 134614033 134614104 -68471428 + A-rich Low_complexity Low_complexity 2 69 0 2142 227 119 43 chr5 134615548 134616344 -68469188 + L1M3e LINE L1 1111 1967 -5063 590 195 32 2 chr5 134616344 134616477 -68469055 - MSTD LTR MaLR -1 395 233 522 261 13 5 chr5 134616594 134616733 -68468799 - MSTC LTR MaLR -257 139 1 858 245 56 35 chr5 134616736 134617132 -68468400 + L1M3e LINE L1 1977 2380 -4657 284 263 13 0 chr5 134618118 134618194 -68467338 + (TA)n Simple_repeat Simple_repeat 1 77 0 9924 23 0 0 chr5 134618899 134620081 -68465451 + L1P LINE L1 4220 5401 -745 4264 279 30 22 chr5 134620852 134622165 -68463367 - HERVL40 LTR ERVL -2158 3372 2050 873 308 36 31 chr5 134622151 134622538 -68462994 - HERVL40 LTR ERVL -3896 1634 1246 * 406 303 99 6 chr5 134622577 134622739 -68462793 - HERVL40 LTR ERVL -4430 1100 924 1463 237 28 47 chr5 134623025 134623493 -68462039 - LTR40b LTR ERVL 0 462 4 1112 264 87 44 chr5 134623529 134624147 -68461385 - L1MDb LINE L1 -4990 1419 775 2239 84 31 52 chr5 134625051 134625080 -68460452 - L1MA1 LINE L1 -2 6300 6272 2180 112 41 44 chr5 134625080 134625445 -68460087 - THE1B LTR MaLR 0 364 1 2239 84 31 52 chr5 134625445 134625604 -68459928 - L1MA1 LINE L1 -30 6272 6111 2111 134 0 0 chr5 134625604 134625902 -68459630 + AluSx SINE Alu 1 298 -14 2239 84 31 52 chr5 134625902 134626093 -68459439 - L1MA1 LINE L1 -191 6111 5928 439 274 75 53 chr5 134626277 134626606 -68458926 - L1M4 LINE L1 -3317 3327 2984 2947 6 0 0 chr5 134626606 134626924 -68458608 - AluYb8 SINE Alu 0 318 1 439 274 75 53 chr5 134626924 134627064 -68458468 - L1M4 LINE L1 -3660 2984 2848 300 227 45 34 chr5 134627066 134627154 -68458378 - L1M4 LINE L1 -4030 2795 2707 278 57 0 0 chr5 134627196 134627231 -68458301 - U2 snRNA snRNA -153 35 1 394 293 93 39 chr5 134627578 134627783 -68457749 - L1M4 LINE L1 -4605 2220 2005 348 312 67 23 chr5 134627808 134628265 -68457267 - L1M4 LINE L1 -4832 1710 1260 23 0 0 0 chr5 134629067 134629090 -68456442 + AT_rich Low_complexity Low_complexity 1 23 0 1289 313 96 51 chr5 134629116 134630160 -68455372 - L2 LINE L2 0 3313 2215 257 210 0 16 chr5 134630161 134630223 -68455309 + L1MC4 LINE L1 6653 6713 -1329 285 75 0 0 chr5 134630246 134630286 -68455246 + (TG)n Simple_repeat Simple_repeat 2 41 0 357 302 132 16 chr5 134630365 134630547 -68454985 - L2 LINE L2 -1197 2117 1915 241 391 85 23 chr5 134630746 134631145 -68454387 - L2 LINE L2 -338 2976 2553 22 56 0 0 chr5 134631373 134631409 -68454123 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr5 134631497 134631522 -68454010 + AT_rich Low_complexity Low_complexity 1 25 0 483 296 97 15 chr5 134631546 134631742 -68453790 - MIR SINE MIR -7 255 44 23 54 0 0 chr5 134631989 134632026 -68453506 + AT_rich Low_complexity Low_complexity 1 37 0 1986 152 76 15 chr5 134632569 134632912 -68452620 - THE1B LTR MaLR 0 364 1 6208 133 18 38 chr5 134632912 134634033 -68451499 - THE1B-int LTR MaLR 0 1580 483 26 0 0 0 chr5 134634033 134634059 -68451473 + AT_rich Low_complexity Low_complexity 1 26 0 7552 31 0 0 chr5 134634059 134635437 -68450095 - L1PA4 LINE L1 -3 6152 4776 4621 52 3 5 chr5 134635437 134636035 -68449497 + L1PA4 LINE L1 4189 4785 -1361 423 57 0 0 chr5 134636196 134636249 -68449283 - L1PA4 LINE L1 -65 6090 6038 331 82 16 16 chr5 134636265 134636326 -68449206 + (TAAAA)n Simple_repeat Simple_repeat 1 61 0 1856 148 36 0 chr5 134636875 134637205 -68448327 - L1MB1 LINE L1 0 6168 5827 2341 184 26 9 chr5 134637205 134637668 -68447864 + L1MB1 LINE L1 5364 5834 -334 2034 174 55 19 chr5 134637678 134638093 -68447439 + MSTB1 LTR MaLR 3 432 0 282 314 0 71 chr5 134638094 134638234 -68447298 + MIR SINE MIR 118 247 -15 22 0 0 0 chr5 134638312 134638334 -68447198 + AT_rich Low_complexity Low_complexity 1 22 0 3678 178 29 14 chr5 134639247 134639426 -68446106 + L1MA3 LINE L1 3502 3677 -2469 231 36 0 0 chr5 134639426 134639454 -68446078 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 3678 178 29 14 chr5 134639454 134640009 -68445523 + L1MA3 LINE L1 3677 4247 -1899 771 179 13 0 chr5 134641107 134641263 -68444269 + L1MA4 LINE L1 6140 6297 -3 779 215 42 77 chr5 134641849 134642109 -68443423 + MLT1A1 LTR MaLR 1 251 -114 880 158 25 5 chr5 134642356 134642552 -68442980 - L1MA4A LINE L1 -7 6296 6097 3345 96 4 6 chr5 134642593 134643071 -68442461 + L1PA13 LINE L1 5687 6163 0 2211 163 184 78 chr5 134643100 134643954 -68441578 - L1MA4 LINE L1 -232 6068 5089 1716 125 38 11 chr5 134643954 134644109 -68441423 - AluSg SINE Alu -22 288 122 288 0 0 0 chr5 134644109 134644141 -68441391 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1716 125 38 11 chr5 134644141 134644249 -68441283 - AluSg SINE Alu -188 122 18 2211 163 184 78 chr5 134644249 134644452 -68441080 - L1MA4 LINE L1 -1211 5089 4909 9190 174 17 5 chr5 134644470 134647210 -68438322 - L1MA1 LINE L1 0 6302 3499 1546 144 24 105 chr5 134647215 134647549 -68437983 + AluYb8 SINE Alu 1 307 -11 2155 170 73 2 chr5 134647918 134648313 -68437219 + MSTA LTR MaLR 1 423 -5 1674 201 0 10 chr5 134648501 134648790 -68436742 + AluJb SINE Alu 1 286 -26 206 167 21 0 chr5 134648790 134648838 -68436694 + (TA)n Simple_repeat Simple_repeat 1 49 0 5464 177 19 1 chr5 134649012 134650561 -68434971 + L1MA3 LINE L1 4639 6213 -92 383 133 19 143 chr5 134650684 134650752 -68434780 + L1MA3 LINE L1 6203 6255 -50 207 0 0 0 chr5 134650752 134650775 -68434757 + (TG)n Simple_repeat Simple_repeat 2 24 0 383 133 19 143 chr5 134650775 134650811 -68434721 + L1MA3 LINE L1 6255 6294 -11 424 160 0 0 chr5 134651126 134651201 -68434331 - L1PB4 LINE L1 0 6156 6082 18215 172 47 33 chr5 134652404 134654178 -68431354 + L1MA2 LINE L1 19 1768 -5955 285 29 0 0 chr5 134654178 134654212 -68431320 + (GA)n Simple_repeat Simple_repeat 1 34 0 18215 172 47 33 chr5 134654212 134656213 -68429319 + L1MA2 LINE L1 1768 3740 -3983 405 0 0 0 chr5 134656213 134656258 -68429274 + (TA)n Simple_repeat Simple_repeat 1 45 0 18215 172 47 33 chr5 134656258 134656846 -68428686 + L1MA2 LINE L1 3740 4319 -3404 2199 69 3 26 chr5 134656846 134657150 -68428382 + L1PA7 LINE L1 5858 6154 0 18215 172 47 33 chr5 134657150 134660388 -68425144 + L1MA2 LINE L1 4319 7723 0 24 0 0 0 chr5 134660388 134660412 -68425120 + AT_rich Low_complexity Low_complexity 1 24 0 1015 306 71 11 chr5 134661347 134661713 -68423819 - LTR16A LTR ERVL -6 444 57 2474 57 3 0 chr5 134662666 134662967 -68422565 - AluY SINE Alu -9 302 1 390 274 52 30 chr5 134663187 134663322 -68422210 + L2 LINE L2 3158 3295 -18 2122 122 0 0 chr5 134664625 134664921 -68420611 + AluSx SINE Alu 1 296 -16 1795 178 7 0 chr5 134665270 134665568 -68419964 - AluJb SINE Alu -12 300 1 2074 112 0 7 chr5 134667878 134668197 -68417335 - AluSx SINE Alu 0 317 1 420 303 74 32 chr5 134668250 134668629 -68416903 - L1MC5 LINE L1 -187 7843 7449 603 254 54 138 chr5 134668960 134669542 -68415990 - L1MC4 LINE L1 -807 7223 6708 24 32 0 0 chr5 134669566 134669597 -68415935 + AT_rich Low_complexity Low_complexity 1 31 0 388 294 45 73 chr5 134669770 134670018 -68415514 - HsTC2 DNA Tc2 -122 1776 1361 2116 138 3 3 chr5 134670018 134670330 -68415202 - AluSx SINE Alu 0 312 1 388 294 45 73 chr5 134670330 134670394 -68415138 - HsTC2 DNA Tc2 -537 1361 1297 408 264 52 26 chr5 134670426 134670581 -68414951 - HsTC2 DNA Tc2 -1238 660 502 232 350 61 0 chr5 134670587 134670750 -68414782 - HsTC2 DNA Tc2 -1681 217 45 471 251 31 11 chr5 134670832 134671023 -68414509 - L1MC4 LINE L1 -2317 5560 5366 327 326 85 15 chr5 134671195 134671526 -68414006 - L1MC4 LINE L1 -1039 5176 4823 342 274 128 68 chr5 134671653 134671949 -68413583 - L1MC4 LINE L1 -1723 4492 4179 799 226 62 70 chr5 134672246 134672367 -68413165 - L1MC5 LINE L1 -543 7418 7298 932 202 63 140 chr5 134672367 134672521 -68413011 - MLT1C LTR MaLR 0 467 303 2139 113 0 3 chr5 134672521 134672823 -68412709 - AluSg SINE Alu -9 301 1 932 202 63 140 chr5 134672823 134673174 -68412358 - MLT1C LTR MaLR -164 303 1 799 226 62 70 chr5 134673174 134673454 -68412078 - L1MC5 LINE L1 -663 7298 7020 544 291 71 7 chr5 134673472 134673767 -68411765 - L1MC4 LINE L1 -3419 2796 2483 353 215 85 62 chr5 134673791 134673921 -68411611 - MLT1C LTR MaLR -330 137 5 379 239 34 8 chr5 134673944 134674061 -68411471 - L1MC4 LINE L1 -3732 2483 2364 254 238 0 59 chr5 134674408 134674509 -68411023 + L1MDa LINE L1 1480 1574 -4966 * 6471 43 4 1 chr5 134674508 134675724 -68409808 - L1PA5 LINE L1 -349 5805 4586 2785 40 31 3 chr5 134675724 134676068 -68409464 + L1PA5 LINE L1 5794 6154 0 362 185 37 9 chr5 134677232 134677340 -68408192 - MER96B DNA MER1_type? -66 351 241 292 200 0 8 chr5 134677436 134677519 -68408013 + L1MDa LINE L1 1458 1514 -4924 1617 290 63 30 chr5 134677625 134678712 -68406820 - L1MC4 LINE L1 -4628 1768 646 537 45 34 11 chr5 134678722 134678811 -68406721 + (TTTTA)n Simple_repeat Simple_repeat 2 92 0 1809 59 4 4 chr5 134678811 134679047 -68406485 - L1PA3 LINE L1 -22 6133 5898 591 304 114 53 chr5 134679037 134679580 -68405952 - L1MC4 LINE L1 -5750 646 71 * 325 147 12 92 chr5 134679755 134679918 -68405614 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 410 189 0 0 chr5 134680180 134680254 -68405278 + MLT1A1 LTR MaLR 1 74 -300 675 200 13 42 chr5 134680257 134680359 -68405173 + MLT1A1 LTR MaLR 204 307 -160 1972 134 0 0 chr5 134680359 134680642 -68404890 + AluSc SINE Alu 1 283 -26 225 0 0 0 chr5 134680642 134680667 -68404865 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 675 200 13 42 chr5 134680667 134680729 -68404803 + MLT1A1 LTR MaLR 305 467 0 385 305 35 45 chr5 134683302 134683502 -68402030 + MLT1K LTR MaLR 391 588 0 1242 244 18 47 chr5 134684639 134685020 -68400512 - MLT1A2 LTR MaLR 0 374 5 216 241 11 46 chr5 134685124 134685211 -68400321 + CT-rich Low_complexity Low_complexity 2 85 0 2803 185 21 2 chr5 134686172 134686701 -68398831 + MER67C LTR ERV1 166 704 -6 490 160 0 0 chr5 134687732 134687826 -68397706 + AluSg/x SINE Alu 214 307 -2 1348 126 5 5 chr5 134688174 134688373 -68397159 + MER2 DNA MER2_type 1 199 -146 1515 199 3 16 chr5 134688373 134688679 -68396853 + AluJo SINE Alu 1 302 -10 21 36 0 0 chr5 134688686 134688714 -68396818 + AT_rich Low_complexity Low_complexity 1 28 0 226 333 13 0 chr5 134688728 134688806 -68396726 + MER2 DNA MER2_type 267 345 0 193 341 171 42 chr5 134689220 134689671 -68395861 - L2 LINE L2 0 3313 2805 262 310 244 28 chr5 134690953 134691166 -68394366 - MIR SINE MIR -2 260 2 319 281 114 0 chr5 134691617 134691731 -68393801 + L2 LINE L2 2236 2362 -952 27 0 0 0 chr5 134692228 134692255 -68393277 + AT_rich Low_complexity Low_complexity 1 27 0 382 228 145 29 chr5 134692653 134692916 -68392616 + MLT1E LTR MaLR 2 264 -329 4105 111 3 50 chr5 134693165 134693850 -68391682 + L1PA13 LINE L1 5510 6162 -1 254 177 32 0 chr5 134693851 134693913 -68391619 + MLT1E1 LTR MaLR 588 651 -3 315 286 54 73 chr5 134694099 134694358 -68391174 - L1ME LINE L1 -347 5774 5521 186 189 0 0 chr5 134694394 134694431 -68391101 + (TA)n Simple_repeat Simple_repeat 1 37 0 29 84 0 0 chr5 134694908 134694979 -68390553 + AT_rich Low_complexity Low_complexity 1 71 0 679 291 140 25 chr5 134697262 134697620 -68387912 + L2 LINE L2 2482 2880 -434 1067 285 68 25 chr5 134697996 134698508 -68387024 - L1MCc LINE L1 -5865 558 25 201 116 23 23 chr5 134698821 134698864 -68386668 + T-rich Low_complexity Low_complexity 2 44 0 2811 194 50 41 chr5 134699014 134699691 -68385841 - L1MA10 LINE L1 -7 6327 5645 2140 203 28 8 chr5 134699691 134700090 -68385442 + Tigger7 DNA MER2_type 1 407 -326 409 213 13 0 chr5 134700111 134700186 -68385346 + Tigger7 DNA MER2_type 2415 2490 -1 406 182 12 2 chr5 134700186 134700270 -68385262 - L1M4 LINE L1 -531 5647 5560 * 1236 239 32 50 chr5 134700267 134700334 -68385198 - L1M3a LINE L1 -4785 1170 1103 2208 95 0 0 chr5 134700334 134700649 -68384883 - AluSq SINE Alu 0 315 1 1236 239 32 50 chr5 134700649 134700935 -68384597 - L1M3a LINE L1 -4852 1103 823 1747 136 25 11 chr5 134700935 134701249 -68384283 - AluSx SINE Alu 0 312 1 1236 239 32 50 chr5 134701249 134701333 -68384199 - L1M3a LINE L1 -5132 823 739 21 36 0 0 chr5 134701614 134701642 -68383890 + AT_rich Low_complexity Low_complexity 1 28 0 246 172 49 25 chr5 134703430 134703601 -68381931 + (TA)n Simple_repeat Simple_repeat 1 175 0 2153 74 46 3 chr5 134703601 134703886 -68381646 - AluY SINE Alu -14 297 1 333 0 0 0 chr5 134704247 134704284 -68381248 + (CA)n Simple_repeat Simple_repeat 2 38 0 315 0 0 0 chr5 134704283 134704318 -68381214 + (GA)n Simple_repeat Simple_repeat 2 36 0 * 352 330 85 44 chr5 134704801 134705258 -68380274 - L1 LINE L1 -2010 4136 3661 447 269 211 6 chr5 134705272 134705457 -68380075 + MLT1H1 LTR MaLR 319 555 0 340 256 117 29 chr5 134706104 134706241 -68379291 + L1M4 LINE L1 2368 2516 -3630 773 85 0 9 chr5 134706288 134706394 -68379138 - L1P LINE L1 -877 5269 5165 2002 75 10 52 chr5 134706394 134706696 -68378836 + L1PA7 LINE L1 5858 6152 -2 321 161 127 4 chr5 134706800 134706938 -68378594 + MER20 DNA MER1_type 7 202 -17 293 238 0 12 chr5 134706963 134707047 -68378485 + (TA)n Simple_repeat Simple_repeat 2 84 0 1798 166 66 18 chr5 134708082 134708414 -68377118 + MLT1B LTR MaLR 32 379 -11 38 22 0 0 chr5 134711493 134711538 -68373994 + AT_rich Low_complexity Low_complexity 1 45 0 2349 266 59 18 chr5 134711583 134712642 -68372890 - L1ME1 LINE L1 -4 6162 5148 4019 107 2 12 chr5 134712642 134713239 -68372293 + L1PB1 LINE L1 5561 6151 0 2349 266 59 18 chr5 134713239 134713288 -68372244 - L1ME1 LINE L1 -1018 5148 5102 333 47 0 0 chr5 134713288 134713331 -68372201 + (CA)n Simple_repeat Simple_repeat 2 44 0 183 176 29 15 chr5 134713815 134713883 -68371649 + GA-rich Low_complexity Low_complexity 2 70 0 722 230 117 50 chr5 134714014 134714475 -68371057 - L1ME1 LINE L1 -1603 4543 4052 4296 170 45 25 chr5 134714514 134714703 -68370829 - L1MA8 LINE L1 -4 6287 6103 1675 151 59 0 chr5 134714703 134714975 -68370557 - AluSx SINE Alu -14 298 11 4296 170 45 25 chr5 134714975 134715726 -68369806 - L1MA8 LINE L1 -188 6103 5329 1048 258 101 29 chr5 134715718 134716184 -68369348 - L1ME1 LINE L1 -2126 4020 3589 * 1572 190 32 62 chr5 134716184 134716584 -68368948 - MLT1B LTR MaLR -1 389 2 1048 258 101 29 chr5 134716584 134717182 -68368350 - L1ME1 LINE L1 -2557 3589 2720 868 243 30 43 chr5 134717197 134717497 -68368035 + Charlie2a DNA MER1_type 1529 1824 -1038 24 32 0 0 chr5 134717545 134717576 -68367956 + AT_rich Low_complexity Low_complexity 1 31 0 599 250 7 14 chr5 134717650 134717794 -68367738 - FLAM_C SINE Alu 0 143 1 27 81 0 0 chr5 134717843 134717905 -68367627 + AT_rich Low_complexity Low_complexity 1 62 0 21 100 0 0 chr5 134718386 134718456 -68367076 + AT_rich Low_complexity Low_complexity 1 70 0 1226 67 0 6 chr5 134718728 134718892 -68366640 - L1PA10 LINE L1 -3 6165 6003 31 26 0 0 chr5 134720276 134720314 -68365218 + AT_rich Low_complexity Low_complexity 1 38 0 1459 181 3 91 chr5 134720665 134720812 -68364720 + AluJb SINE Alu 1 107 -205 207 0 0 0 chr5 134720812 134720835 -68364697 + (CA)n Simple_repeat Simple_repeat 2 24 0 1459 181 3 91 chr5 134720835 134721007 -68364525 + AluJb SINE Alu 107 292 -20 4263 175 16 16 chr5 134722089 134722957 -68362575 - L1MA7 LINE L1 -3 6288 5421 209 283 83 0 chr5 134723390 134723450 -68362082 + L2 LINE L2 3200 3264 -8 24 53 0 0 chr5 134725047 134725085 -68360447 + AT_rich Low_complexity Low_complexity 1 38 0 608 292 122 52 chr5 134725268 134725850 -68359682 + L1M4 LINE L1 3122 3744 -2402 25 31 0 0 chr5 134727619 134727651 -68357881 + AT_rich Low_complexity Low_complexity 1 32 0 774 264 47 13 chr5 134728422 134728657 -68356875 - MLT1H LTR MaLR -306 243 1 653 277 132 24 chr5 134728862 134729217 -68356315 + L1MDb LINE L1 909 1301 -5239 2195 126 2 86 chr5 134729217 134729614 -68355918 - THE1B LTR MaLR 0 364 1 653 277 132 24 chr5 134729614 134729804 -68355728 + L1MDb LINE L1 1301 1469 -5071 * 9205 193 27 12 chr5 134729779 134731881 -68353651 + L1MA8 LINE L1 3502 5633 -907 2909 185 36 19 chr5 134732036 134732431 -68353101 + L1MA8 LINE L1 5651 6066 -619 1648 143 0 37 chr5 134732431 134732731 -68352801 + AluJb SINE Alu 24 313 0 2909 185 36 19 chr5 134732731 134732976 -68352556 + L1MA8 LINE L1 6066 6305 -380 899 70 0 0 chr5 134732976 134733091 -68352441 + AluSp/q SINE Alu 175 289 -24 1460 198 72 6 chr5 134733100 134733463 -68352069 + L1MA8 LINE L1 6298 6684 -1 21 0 0 0 chr5 134733467 134733488 -68352044 + AT_rich Low_complexity Low_complexity 1 21 0 1053 254 53 48 chr5 134733567 134734463 -68351069 + L1MDb LINE L1 1817 2793 -3747 424 270 72 7 chr5 134734859 134735011 -68350521 + L1MDb LINE L1 2646 2807 -3914 3884 228 32 37 chr5 134735386 134736295 -68349237 - L1 LINE L1 -1853 4293 3389 2188 125 0 3 chr5 134736295 134736606 -68348926 - AluSx SINE Alu -2 310 1 3884 228 32 37 chr5 134736606 134736843 -68348689 - L1 LINE L1 -2757 3389 3152 600 239 11 11 chr5 134736835 134737015 -68348517 + L1 LINE L1 4290 4469 -1677 * 2143 124 0 0 chr5 134737027 134737325 -68348207 + AluSx SINE Alu 1 298 -14 2109 131 0 0 chr5 134738163 134738461 -68347071 + AluSg1 SINE Alu 1 298 -11 2257 105 0 13 chr5 134738563 134738876 -68346656 + AluSg SINE Alu 1 309 -1 255 327 64 27 chr5 134739671 134739891 -68345641 - L1ME LINE L1 -502 5662 5435 2086 121 3 0 chr5 134739900 134740189 -68345343 - AluSx SINE Alu -20 292 3 29 70 0 0 chr5 134740200 134740257 -68345275 + AT_rich Low_complexity Low_complexity 1 57 0 2438 81 0 0 chr5 134740295 134740605 -68344927 - AluY SINE Alu -1 310 1 627 154 12 173 chr5 134741353 134741597 -68343935 - MLT2D LTR ERVL 0 454 232 581 311 0 12 chr5 134741597 134741758 -68343774 + L1PA15 LINE L1 9 167 -6620 8551 251 38 36 chr5 134741902 134745875 -68339657 + L1PA15 LINE L1 163 4690 -2107 5033 148 19 26 chr5 134745878 134747890 -68337642 + L1PA15 LINE L1 4804 6812 -4 987 227 25 0 chr5 134747891 134748129 -68337403 - MLT2D LTR ERVL -170 244 1 851 180 4 144 chr5 134748393 134748649 -68336883 - MER67D LTR ERV1 -78 436 217 287 192 14 0 chr5 134748650 134748723 -68336809 + CT-rich Low_complexity Low_complexity 3 76 0 414 135 14 0 chr5 134748723 134748797 -68336735 - L1PA10 LINE L1 0 6168 6094 941 160 48 44 chr5 134748797 134749020 -68336512 - MER67D LTR ERV1 -293 368 8 23 33 0 0 chr5 134749341 134749371 -68336161 + AT_rich Low_complexity Low_complexity 1 30 0 2913 122 22 2 chr5 134750088 134750532 -68335000 + MLT2A2 LTR ERVL 1 453 0 8229 76 24 5 chr5 134750532 134751634 -68333898 + HERVL-A2 LTR ERVL 1 1123 -4531 1335 69 0 0 chr5 134751643 134751816 -68333716 + MLT2A2 LTR ERVL 281 453 0 3530 155 56 16 chr5 134752501 134753228 -68332304 - L1MA7 LINE L1 -3 6288 5533 1986 136 0 3 chr5 134753371 134753679 -68331853 - AluSc SINE Alu -2 307 1 236 293 203 45 chr5 134754093 134754428 -68331104 + MLT1H LTR MaLR 139 526 -23 271 374 64 15 chr5 134755196 134755399 -68330133 + L3 LINE CR1 1232 1444 -133 2111 132 3 0 chr5 134755735 134756045 -68329487 + AluSx SINE Alu 2 312 0 29 28 0 0 chr5 134756045 134756081 -68329451 + AT_rich Low_complexity Low_complexity 1 36 0 539 203 140 82 chr5 134757308 134757515 -68328017 + L1MD1 LINE L1 19 237 -6303 8747 250 58 26 chr5 134757729 134760719 -68324813 + L1MD1 LINE L1 94 3199 -3341 1883 141 33 0 chr5 134760719 134761018 -68324514 + AluSc SINE Alu 1 309 0 8747 250 58 26 chr5 134761018 134761306 -68324226 + L1MD1 LINE L1 3199 3476 -3064 2127 208 38 16 chr5 134761383 134761878 -68323654 + MER34C LTR ERV1 1 506 -79 774 245 63 24 chr5 134761883 134762262 -68323270 + L1MD1 LINE L1 3500 3893 -2647 7388 56 12 1 chr5 134762320 134764053 -68321479 - L1PA5 LINE L1 -8 6146 4404 4321 31 19 0 chr5 134764178 134764720 -68320812 - L1PA5 LINE L1 -1742 4404 3853 * 14116 44 1 3 chr5 134764719 134766509 -68319023 + L1PA5 LINE L1 2096 3880 -2266 2887 252 72 20 chr5 134766511 134767635 -68317897 + L1MD1 LINE L1 3932 5114 -1426 259 127 18 18 chr5 134767648 134767703 -68317829 + CT-rich Low_complexity Low_complexity 4 58 0 952 227 11 11 chr5 134767704 134768219 -68317313 + L1MD1 LINE L1 6017 6636 0 21 0 0 0 chr5 134768677 134768698 -68316834 + AT_rich Low_complexity Low_complexity 1 21 0 1594 194 14 38 chr5 134768720 134769065 -68316467 + L1 LINE L1 23 359 -6671 21 0 0 0 chr5 134819663 134819684 -68265848 + AT_rich Low_complexity Low_complexity 1 21 0 351 215 58 21 chr5 134819734 134819862 -68265670 - MLT1A2 LTR MaLR -3 393 242 397 292 99 21 chr5 134819979 134820212 -68265320 + L1 LINE L1 3987 4237 -2869 252 285 100 59 chr5 134820451 134820754 -68264778 + L1 LINE L1 4912 5228 -1878 1536 219 82 22 chr5 134820975 134821376 -68264156 - MLT1C LTR MaLR -42 425 1 550 244 30 0 chr5 134821376 134821507 -68264025 - MLT1C-int LTR MaLR 0 1371 1237 2848 196 64 73 chr5 134821533 134822070 -68263462 - MLT1C-int LTR MaLR -596 775 246 1438 79 5 10 chr5 134822070 134822272 -68263260 - L1PB1 LINE L1 -2 6149 5949 2848 196 64 73 chr5 134822272 134822516 -68263016 - MLT1C-int LTR MaLR -1125 246 1 811 268 52 17 chr5 134822518 134822809 -68262723 - MLT1C LTR MaLR -2 465 165 383 280 42 0 chr5 134822922 134823040 -68262492 - LTR65 LTR ERV1 -12 657 535 777 162 23 40 chr5 134823266 134823439 -68262093 - LTR65 LTR ERV1 -499 170 1 22 0 0 0 chr5 134824404 134824426 -68261106 + AT_rich Low_complexity Low_complexity 1 22 0 264 122 0 0 chr5 134824695 134824736 -68260796 + (A)n Simple_repeat Simple_repeat 1 41 0 227 207 98 0 chr5 134825236 134825318 -68260214 - L1M4 LINE L1 -3834 2312 2223 1293 119 25 0 chr5 134825440 134825642 -68259890 + L1PA13 LINE L1 5955 6161 -2 261 359 34 8 chr5 134826686 134826803 -68258729 - MIR SINE MIR -96 166 47 2157 149 51 20 chr5 134827740 134828224 -68257308 + MER51B LTR ERV1 1 375 -2 1563 192 17 0 chr5 134828513 134828804 -68256728 - THE1-int LTR MaLR -306 1274 979 1335 248 30 68 chr5 134828807 134829235 -68256297 - MLT2B3 LTR ERVL -142 412 1 1573 249 178 43 chr5 134829235 134829925 -68255607 - MER21B LTR ERV1 -66 797 15 23 0 0 0 chr5 134830069 134830092 -68255440 + AT_rich Low_complexity Low_complexity 1 23 0 200 226 16 0 chr5 134830837 134830899 -68254633 + CT-rich Low_complexity Low_complexity 3 65 0 1239 342 20 2 chr5 134831201 134831640 -68253892 + L1M2 LINE L1 4 450 -6399 324 0 0 0 chr5 134831990 134832026 -68253506 + (GA)n Simple_repeat Simple_repeat 1 36 0 2020 127 0 0 chr5 134832026 134832302 -68253230 - AluSg SINE Alu -34 276 1 320 383 101 7 chr5 134832304 134832453 -68253079 + L1M2 LINE L1 628 790 -6059 1201 248 10 33 chr5 134832466 134832773 -68252759 + L1PA16 LINE L1 447 746 -6103 7027 260 110 40 chr5 134833174 134834660 -68250872 + L1PA16 LINE L1 1419 2800 -4067 363 60 0 0 chr5 134834660 134834710 -68250822 + (CA)n Simple_repeat Simple_repeat 2 51 0 7027 260 110 40 chr5 134834710 134834836 -68250696 + L1PA16 LINE L1 2800 2916 -3951 2228 119 33 25 chr5 134834836 134835197 -68250335 - THE1B LTR MaLR 0 364 1 7027 260 110 40 chr5 134835197 134836978 -68248554 + L1PA16 LINE L1 2916 4571 -2296 8679 45 0 1 chr5 134836978 134838806 -68246726 - L1PA6 LINE L1 -18 6136 4308 7027 260 110 40 chr5 134838806 134839724 -68245808 + L1PA16 LINE L1 4571 6170 -697 422 107 60 24 chr5 134839724 134839788 -68245744 + L1PA15 LINE L1 6076 6162 -3 7027 260 110 40 chr5 134839788 134839809 -68245723 + L1PA16 LINE L1 6170 6188 -679 3572 164 16 15 chr5 134839827 134840499 -68245033 + L1PA16 LINE L1 6179 6851 -18 849 305 142 15 chr5 134840603 134841131 -68244401 + MLT1L LTR MaLR 1 595 -20 788 345 154 36 chr5 134841132 134842223 -68243309 + L2 LINE L2 1901 3138 -175 220 185 15 15 chr5 134842236 134842301 -68243231 + (TA)n Simple_repeat Simple_repeat 2 66 0 180 318 28 56 chr5 134845085 134845192 -68240340 + MIR SINE MIR 32 135 -73 270 298 43 35 chr5 134845532 134845673 -68239859 + MER103 DNA DNA 6 147 -19 205 261 31 46 chr5 134845759 134845793 -68239739 + MIR3 SINE MIR 108 140 -68 231 389 50 7 chr5 134845793 134845932 -68239600 + MIR3 SINE MIR 2 146 -62 624 91 0 0 chr5 134846150 134846238 -68239294 + (TA)n Simple_repeat Simple_repeat 1 88 0 499 161 71 0 chr5 134846238 134846350 -68239182 - L1MA7 LINE L1 -76 6215 6096 808 251 166 11 chr5 134846380 134846815 -68238717 + L1ME3A LINE L1 4372 4873 -1273 1961 262 69 50 chr5 134846837 134847718 -68237814 + L1ME3A LINE L1 5265 6164 -6 36149 98 8 9 chr5 134848373 134854514 -68231018 + L1PA6 LINE L1 11 6141 -13 21 36 0 0 chr5 134854516 134854544 -68230988 + AT_rich Low_complexity Low_complexity 1 28 0 1254 188 24 64 chr5 134854922 134855178 -68230354 + AluJb SINE Alu 16 260 -52 2754 3 0 0 chr5 134855178 134855473 -68230059 + AluYa5 SINE Alu 1 295 -16 1254 188 24 64 chr5 134855473 134855514 -68230018 + AluJb SINE Alu 260 301 -11 183 100 0 0 chr5 134855768 134855798 -68229734 + (CAG)n Simple_repeat Simple_repeat 3 32 0 291 93 0 0 chr5 134856199 134856242 -68229290 + (TG)n Simple_repeat Simple_repeat 2 44 0 3208 32 13 0 chr5 134856469 134856866 -68228666 + L1HS LINE L1 5740 6152 -3 300 138 0 0 chr5 134856868 134856933 -68228599 + (A)n Simple_repeat Simple_repeat 1 65 0 3189 166 29 15 chr5 134857026 134857621 -68227911 - LTR26 LTR ERV1 0 603 1 1259 130 29 0 chr5 134857997 134858204 -68227328 + L1MA1 LINE L1 6087 6299 -3 203 83 83 0 chr5 134858799 134858835 -68226697 + T-rich Low_complexity Low_complexity 3 41 0 2118 8 0 0 chr5 134858838 134859078 -68226454 - L1HS LINE L1 -2 6153 5914 23 54 0 0 chr5 134860466 134860503 -68225029 + AT_rich Low_complexity Low_complexity 1 37 0 27 49 0 0 chr5 134860596 134860637 -68224895 + AT_rich Low_complexity Low_complexity 1 41 0 208 239 22 0 chr5 134860790 134860836 -68224696 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 17395 31 0 0 chr5 134860933 134863793 -68221739 + L1PA3 LINE L1 3292 6155 0 452 316 49 31 chr5 134864896 134865121 -68220411 + MIR SINE MIR 6 234 -28 1107 191 0 52 chr5 134865474 134865741 -68219791 - L1MA9 LINE L1 -25 6287 6035 * 1772 192 111 14 chr5 134865725 134866049 -68219483 + L1MB1 LINE L1 5445 5736 -432 408 40 0 0 chr5 134866049 134866099 -68219433 + (CA)n Simple_repeat Simple_repeat 2 51 0 5449 62 3 0 chr5 134866109 134866797 -68218735 + L1PA5 LINE L1 5462 6151 -3 1772 192 111 14 chr5 134866797 134866894 -68218638 + L1MB1 LINE L1 5744 5919 -249 411 152 51 0 chr5 134866927 134867006 -68218526 + MER61E LTR ERV1 3 85 -484 271 105 35 53 chr5 134866982 134867039 -68218493 + LTR19C LTR ERV1 137 192 -587 * 3570 115 38 9 chr5 134867058 134867616 -68217916 - L1PA7 LINE L1 -2098 4048 3475 * 8474 83 13 4 chr5 134867614 134869688 -68215844 + L1PA7 LINE L1 4054 6146 -8 1618 187 97 99 chr5 134869757 134870200 -68215332 + MER61E LTR ERV1 85 526 -43 274 378 74 29 chr5 134870367 134870679 -68214853 + L2 LINE L2 2555 2880 -434 228 248 188 20 chr5 134871438 134871539 -68213993 + L2 LINE L2 3154 3271 -1 32 0 0 0 chr5 134872513 134872545 -68212987 + AT_rich Low_complexity Low_complexity 1 32 0 2324 112 0 0 chr5 134873204 134873507 -68212025 + AluSc SINE Alu 1 303 -6 3545 190 30 23 chr5 134874380 134874867 -68210665 + L1MB5 LINE L1 5356 5851 -323 1647 236 34 78 chr5 134874867 134875507 -68210025 + LTR9 LTR ERV1 1 612 0 3545 190 30 23 chr5 134875507 134875797 -68209735 + L1MB5 LINE L1 5851 6138 -36 216 0 0 0 chr5 134875906 134875930 -68209602 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 182 36 0 36 chr5 134876321 134876349 -68209183 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 728 142 0 0 chr5 134876434 134876540 -68208992 + AluY SINE Alu 1 106 -205 289 290 93 0 chr5 134879523 134879630 -68205902 + L2 LINE L2 3192 3308 -5 2199 166 69 59 chr5 134879922 134880429 -68205103 - MER67D LTR ERV1 0 514 3 192 321 210 31 chr5 134880764 134880926 -68204606 + MIR SINE MIR 26 216 -46 258 32 0 0 chr5 134882810 134882841 -68202691 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2609 118 35 35 chr5 134882873 134883026 -68202506 - MER57B LTR ERV1 -9 425 273 1529 207 48 21 chr5 134883026 134883360 -68202172 - MER61A LTR ERV1 0 343 1 2609 118 35 35 chr5 134883360 134883631 -68201901 - MER57B LTR ERV1 -160 274 1 242 374 20 0 chr5 134883686 134883785 -68201747 - MIR SINE MIR -93 169 69 306 323 71 16 chr5 134883879 134884006 -68201526 + L1MEd LINE L1 38 171 -5948 260 329 29 35 chr5 134884080 134884250 -68201282 + L1MEd LINE L1 304 472 -5647 32 0 0 0 chr5 134884327 134884359 -68201173 + AT_rich Low_complexity Low_complexity 1 32 0 501 263 62 90 chr5 134884454 134885006 -68200526 + L1MEd LINE L1 740 1313 -4871 624 244 57 29 chr5 134885408 134885617 -68199915 + MER58C DNA MER1_type 1 215 0 1230 47 0 0 chr5 134886098 134886247 -68199285 - L1PA6 LINE L1 -5 6149 6001 316 222 37 96 chr5 134886265 134886331 -68199201 + L1MEd LINE L1 772 828 -5291 2432 93 3 0 chr5 134886331 134886643 -68198889 - AluSp SINE Alu 0 313 1 316 222 37 96 chr5 134886643 134886711 -68198821 + L1MEd LINE L1 828 898 -5221 181 409 57 0 chr5 134887824 134887912 -68197620 - L2 LINE L2 -35 3237 3145 21 0 0 0 chr5 134887916 134887937 -68197595 + AT_rich Low_complexity Low_complexity 1 21 0 464 256 132 8 chr5 134888445 134888574 -68196958 - LTR16B LTR ERVL -8 456 312 313 45 23 0 chr5 134888896 134888940 -68196592 + MADE1 DNA Mariner 2 46 -34 791 258 61 0 chr5 134890197 134890395 -68195137 - MER68 LTR ERV1 -4 558 349 34 55 0 0 chr5 134891090 134891145 -68194387 + AT_rich Low_complexity Low_complexity 1 55 0 235 354 83 0 chr5 134893947 134894043 -68191489 - L2 LINE L2 -2 3311 3208 1773 145 3 35 chr5 134894051 134894340 -68191192 + AluSg SINE Alu 2 281 -29 1128 134 0 0 chr5 134894341 134894867 -68190665 + (GA)n Simple_repeat Simple_repeat 1 526 0 288 77 0 0 chr5 134894867 134894906 -68190626 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 252 242 10 30 chr5 134894912 134895011 -68190521 - L2 LINE L2 -121 3192 3096 * 1392 307 82 32 chr5 134894993 134895703 -68189829 - L2 LINE L2 -580 2734 1990 21 36 0 0 chr5 134897059 134897087 -68188445 + AT_rich Low_complexity Low_complexity 1 28 0 421 159 0 0 chr5 134898562 134898631 -68186901 + MER68 LTR ERV1 18 86 -476 401 286 194 4 chr5 134898743 134898970 -68186562 - L2 LINE L2 0 3313 3044 266 358 104 0 chr5 134901272 134901406 -68184126 + MER117 DNA MER1_type 3 150 -47 23 0 0 0 chr5 134901810 134901833 -68183699 + AT_rich Low_complexity Low_complexity 1 23 0 14088 186 8 15 chr5 134902052 134906116 -68179416 + L1PB1 LINE L1 2110 6151 0 21 0 0 0 chr5 134906282 134906303 -68179229 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr5 134907871 134907908 -68177624 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 134907984 134908020 -68177512 + AT_rich Low_complexity Low_complexity 1 36 0 1638 171 42 0 chr5 134908436 134908746 -68176786 - MER34B LTR ERV1 -17 548 226 2952 153 34 8 chr5 134908829 134909324 -68176208 + MER41E LTR ERV1 1 508 -4 1050 185 73 0 chr5 134909337 134909542 -68175990 - MER34B LTR ERV1 -345 220 1 15741 113 5 2 chr5 134909626 134912792 -68172740 - L1PA8 LINE L1 0 6487 3309 10243 145 18 57 chr5 134912796 134913165 -68172367 - L1PA8 LINE L1 -3944 2517 2135 2110 125 3 23 chr5 134913165 134913470 -68172062 + AluSg SINE Alu 1 299 -11 10243 145 18 57 chr5 134913470 134915668 -68169864 - L1PA8 LINE L1 -4326 2135 1 595 134 36 0 chr5 134915981 134916093 -68169439 + L1MA7 LINE L1 6175 6290 -1 22 35 0 0 chr5 134916340 134916369 -68169163 + AT_rich Low_complexity Low_complexity 1 29 0 4031 158 27 7 chr5 134916572 134917269 -68168263 + MER50 LTR ERV1 1 711 -23 1531 171 24 54 chr5 134917270 134917603 -68167929 + MER4D LTR ERV1 581 903 0 206 211 0 53 chr5 134917723 134917780 -68167752 + CT-rich Low_complexity Low_complexity 4 57 0 361 165 0 24 chr5 134918237 134918322 -68167210 + CT-rich Low_complexity Low_complexity 1 83 0 1104 169 0 6 chr5 134918818 134918990 -68166542 + AluSx SINE Alu 1 171 -141 851 205 12 0 chr5 134918994 134919155 -68166377 + MER67D LTR ERV1 243 405 -109 2037 175 15 0 chr5 134919196 134919539 -68165993 + MER7A DNA MER2_type 1 346 0 240 100 0 0 chr5 134919681 134919721 -68165811 + (CA)n Simple_repeat Simple_repeat 2 41 0 295 266 35 70 chr5 134920731 134920874 -68164658 - MIR SINE MIR -105 157 20 254 295 3 38 chr5 134920999 134921085 -68164447 + MIR SINE MIR 69 151 -74 432 311 161 7 chr5 134923087 134923319 -68162213 + L1M4 LINE L1 2110 2305 -3841 2194 112 3 0 chr5 134923319 134923623 -68161909 + AluSx SINE Alu 4 308 -4 432 311 161 7 chr5 134923623 134923805 -68161727 + L1M4 LINE L1 2305 2588 -3558 401 276 87 8 chr5 134924410 134924537 -68160995 + MLT1I LTR MaLR 44 180 -229 571 256 9 71 chr5 134924550 134924761 -68160771 + MER82 DNA MER2_type 7 204 -449 2168 86 0 21 chr5 134924980 134925294 -68160238 + AluSq SINE Alu 9 316 0 1743 187 34 42 chr5 134925398 134925756 -68159776 + MER82 DNA MER2_type 199 553 -100 443 268 8 16 chr5 134925826 134925953 -68159579 + MLT1I LTR MaLR 282 407 -2 26 74 0 0 chr5 134926166 134926220 -68159312 + AT_rich Low_complexity Low_complexity 1 54 0 2743 225 57 4 chr5 134927460 134928157 -68157375 - MER50 LTR ERV1 0 734 1 434 360 82 44 chr5 134929162 134929668 -68155864 - L2 LINE L2 -4 3268 2745 350 252 73 24 chr5 134929949 134930072 -68155460 + LTR67 LTR ERVL 370 498 -59 2500 229 0 41 chr5 134930102 134930660 -68154872 - MLT1F LTR MaLR -5 537 3 235 298 0 0 chr5 134930660 134930711 -68154821 + LTR67 LTR ERVL 504 554 -3 922 329 62 17 chr5 134930715 134931244 -68154288 - L2 LINE L2 -561 2753 2201 2138 123 0 10 chr5 134931361 134931671 -68153861 - AluSg SINE Alu -2 308 2 22 0 0 0 chr5 134932843 134932865 -68152667 + AT_rich Low_complexity Low_complexity 1 22 0 287 339 33 28 chr5 134934815 134934995 -68150537 - MIR SINE MIR 0 262 82 541 290 113 18 chr5 134936010 134936231 -68149301 - MIR SINE MIR 0 262 21 654 172 329 21 chr5 134937946 134938187 -68147345 - MER33 DNA MER1_type -7 356 3 339 333 85 78 chr5 134938874 134939180 -68146352 - L2 LINE L2 0 3272 2965 2325 116 11 11 chr5 134939365 134939720 -68145812 - THE1A LTR MaLR 0 355 1 182 242 0 0 chr5 134939949 134939982 -68145550 - L2 LINE L2 -23 3249 3217 * 376 257 150 7 chr5 134939953 134940093 -68145439 - MIR SINE MIR -21 241 82 681 213 32 21 chr5 134941333 134941521 -68144011 + L1MA8 LINE L1 6102 6291 0 2002 223 72 21 chr5 134941761 134942231 -68143301 + MLT2B2 LTR ERVL 3 496 -19 580 140 205 75 chr5 134942257 134942508 -68143024 - MER4C LTR ERV1 -21 444 153 1127 159 165 45 chr5 134942513 134942822 -68142710 - MER4A LTR ERV1 -318 346 1 274 347 102 0 chr5 134943259 134943357 -68142175 + L2 LINE L2 3148 3255 -17 2185 108 7 0 chr5 134943480 134943801 -68141731 - AluSq SINE Alu 0 313 1 363 306 29 18 chr5 134943974 134944144 -68141388 - L1ME4a LINE L1 -199 5922 5751 434 274 98 12 chr5 134944816 134944980 -68140552 - MIR SINE MIR -1 261 84 444 19 0 0 chr5 134945550 134945603 -68139929 + (CA)n Simple_repeat Simple_repeat 1 53 0 224 200 50 0 chr5 134945707 134945767 -68139765 + (TTCA)n Simple_repeat Simple_repeat 3 65 0 28 61 0 0 chr5 134945973 134946022 -68139510 + AT_rich Low_complexity Low_complexity 1 49 0 498 302 130 42 chr5 134946794 134947241 -68138291 - MLT1J LTR MaLR 0 511 26 1682 131 45 88 chr5 134947243 134947595 -68137937 + MER1B DNA MER1_type 1 337 0 3622 154 18 9 chr5 134947800 134948476 -68137056 + L1MA4 LINE L1 5618 6299 -1 1097 227 35 0 chr5 134950812 134951004 -68134528 + MER58A DNA MER1_type 1 199 -25 2675 201 87 27 chr5 134951004 134951566 -68133966 + MER77 LTR ERV1 3 598 -7 1901 192 134 54 chr5 134952107 134952696 -68132836 - MER92B LTR ERV1 0 636 1 23 33 0 0 chr5 134953087 134953117 -68132415 + AT_rich Low_complexity Low_complexity 1 30 0 229 250 59 79 chr5 134953227 134953379 -68132153 - L2 LINE L2 -12 3301 3153 2178 176 16 3 chr5 134953392 134953766 -68131766 + MLT1B LTR MaLR 1 379 -11 202 297 14 0 chr5 134953912 134953986 -68131546 - L2 LINE L2 -413 2900 2826 2225 125 52 45 chr5 134957289 134957714 -68127818 + MSTA LTR MaLR 1 428 0 8772 186 38 2 chr5 134957714 134959302 -68126230 + MSTA-int LTR MaLR 1 1645 -6 1792 201 105 10 chr5 134959308 134959697 -68125835 + MSTB LTR MaLR 1 426 0 847 237 121 38 chr5 134959777 134960216 -68125316 + MLT1D LTR MaLR 1 467 0 1618 248 159 9 chr5 134961685 134962377 -68123155 - L1ME3A LINE L1 -6 6164 5369 621 230 93 76 chr5 134962636 134962927 -68122605 - LTR48B LTR ERV1 -9 778 383 324 298 16 33 chr5 134962994 134963115 -68122417 - MER34 LTR ERV1 -423 119 1 612 263 58 22 chr5 134963119 134963397 -68122135 - L1ME3A LINE L1 -956 5190 4903 21 0 0 0 chr5 134964135 134964156 -68121376 + AT_rich Low_complexity Low_complexity 1 21 0 1249 268 147 6 chr5 134965122 134965654 -68119878 + L2 LINE L2 2714 3313 0 22 0 0 0 chr5 134966541 134966563 -68118969 + AT_rich Low_complexity Low_complexity 1 22 0 3688 122 12 57 chr5 134966563 134966942 -68118590 - L1PB1 LINE L1 -3 6148 5812 300 111 0 0 chr5 134966942 134966987 -68118545 + (TG)n Simple_repeat Simple_repeat 2 46 0 3688 122 12 57 chr5 134966987 134967288 -68118244 - L1PB1 LINE L1 -339 5812 5499 4275 178 3 21 chr5 134967288 134968361 -68117171 + L1PB1 LINE L1 4442 5490 -661 30 27 0 0 chr5 134969127 134969164 -68116368 + AT_rich Low_complexity Low_complexity 1 37 0 328 181 139 42 chr5 134970658 134970802 -68114730 + MER103 DNA DNA 8 165 -1 620 235 5 115 chr5 134971514 134971714 -68113818 + MIR SINE MIR 69 246 -16 372 356 68 37 chr5 134971725 134972076 -68113456 - L2 LINE L2 -32 3281 2920 1201 310 163 21 chr5 134972492 134973156 -68112376 - L2 LINE L2 -410 2904 2147 1275 209 88 5 chr5 134973215 134973592 -68111940 - Charlie4a DNA MER1_type -10 498 91 468 113 0 0 chr5 134973956 134974027 -68111505 + L1MA3 LINE L1 6228 6298 -7 522 315 98 37 chr5 134974032 134974359 -68111173 + L2 LINE L2 2934 3280 -33 744 289 52 24 chr5 134975124 134975415 -68110117 - L2 LINE L2 0 3313 3015 233 291 220 22 chr5 134975415 134975597 -68109935 + MLT1J1 LTR MaLR 123 340 -106 229 171 85 12 chr5 134975638 134975720 -68109812 + (TATATG)n Simple_repeat Simple_repeat 5 92 0 196 283 75 88 chr5 134975822 134975981 -68109551 - L2 LINE L2 -349 2965 2809 236 239 127 0 chr5 134976026 134976064 -68109468 + MER3 DNA MER1_type 1 47 -162 280 111 0 97 chr5 134976064 134976136 -68109396 - MER3 DNA MER1_type 0 209 145 * 332 194 61 20 chr5 134976088 134976186 -68109346 + MER3 DNA MER1_type 108 209 0 740 345 102 40 chr5 134976193 134976645 -68108887 - L2 LINE L2 -573 2741 2262 420 285 76 56 chr5 134977407 134977774 -68107758 - L1ME4a LINE L1 -282 5839 5469 324 333 55 0 chr5 134978085 134978250 -68107282 - L1ME4a LINE L1 -1089 5057 4884 1602 241 16 75 chr5 134978627 134979175 -68106357 + LTR40a LTR ERVL 2 517 -2 909 309 34 18 chr5 134980498 134980880 -68104652 + HERV16 LTR ERVL 1 388 -4608 665 371 54 15 chr5 134980912 134981644 -68103888 + MERVL LTR ERVL 3024 3838 -1926 258 310 75 11 chr5 134982832 134983006 -68102526 - L1ME LINE L1 -334 5787 5603 327 277 48 0 chr5 134983547 134983630 -68101902 + L2 LINE L2 3184 3270 -2 253 333 0 0 chr5 134983744 134983822 -68101710 + HAL1 LINE L1 4 81 -2426 22 0 0 0 chr5 134985266 134985288 -68100244 + AT_rich Low_complexity Low_complexity 1 22 0 1173 240 93 66 chr5 134985367 134985851 -68099681 - MLT1F1 LTR MaLR -42 525 4 22 35 0 0 chr5 134986176 134986205 -68099327 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 134986530 134986558 -68098974 + AT_rich Low_complexity Low_complexity 1 28 0 297 268 24 164 chr5 134987650 134987863 -68097669 - MER91A DNA MER1_type -13 183 1 3998 161 15 18 chr5 134987934 134988577 -68096955 + MER50 LTR ERV1 1 643 -91 2092 124 7 0 chr5 134988577 134988860 -68096672 - AluSc SINE Alu -24 285 1 3998 161 15 18 chr5 134988860 134988929 -68096603 + MER50 LTR ERV1 643 711 -23 1217 209 138 28 chr5 134988942 134989296 -68096236 + MSTD LTR MaLR 4 396 0 22 35 0 0 chr5 134990197 134990226 -68095306 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 134990554 134990577 -68094955 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr5 134990607 134990649 -68094883 + AT_rich Low_complexity Low_complexity 1 42 0 233 349 76 0 chr5 134990791 134991029 -68094503 - L1MC4a LINE L1 -1857 5951 5696 180 361 114 30 chr5 134992798 134992964 -68092568 - L2 LINE L2 -5 3267 3088 249 371 100 28 chr5 134993696 134993987 -68091545 - L2 LINE L2 -345 2969 2658 4476 208 45 7 chr5 134994785 134995752 -68089780 - MER45B DNA AcHobo -23 1017 15 303 313 80 7 chr5 134995769 134995919 -68089613 + LTR16A1 LTR ERVL 296 456 -1 234 333 0 0 chr5 134996306 134996366 -68089166 + MER58A DNA MER1_type 1 60 -164 1257 237 39 54 chr5 134996366 134996775 -68088757 + L1MA9 LINE L1 5871 6273 -39 771 203 68 0 chr5 134996806 134996954 -68088578 + MER58B DNA MER1_type 184 341 0 1899 123 4 0 chr5 134997001 134997270 -68088262 - THE1B LTR MaLR 0 364 95 446 337 50 35 chr5 134997605 134997866 -68087666 + L1MCc LINE L1 350 614 -5809 1760 255 86 8 chr5 134998011 134998596 -68086936 + L1MCc LINE L1 791 1420 -5003 430 273 52 21 chr5 134998740 134998934 -68086598 + HAL1 LINE L1 1398 1597 -910 419 205 0 24 chr5 134998958 134999041 -68086491 + L1M3e LINE L1 1 81 -6949 2494 37 0 0 chr5 135000037 135000336 -68085196 + L1PA4 LINE L1 5854 6152 -3 461 302 135 16 chr5 135000440 135000685 -68084847 - MLT1I LTR MaLR -23 386 113 1596 145 22 65 chr5 135001038 135001362 -68084170 - L1PA15 LINE L1 -9 6156 5847 296 303 167 0 chr5 135002372 135002504 -68083028 + MIR SINE MIR 79 232 -30 2569 270 62 26 chr5 135002858 135003635 -68081897 + MER21B LTR ERV1 1 805 -58 190 176 39 0 chr5 135004182 135004233 -68081299 + L3b LINE CR1 1171 1223 -360 4741 94 24 9 chr5 135004261 135004427 -68081105 - L1P3 LINE L1 -673 5481 5319 2146 116 0 3 chr5 135004427 135004719 -68080813 - AluSg SINE Alu -19 291 1 4741 94 24 9 chr5 135004719 135005353 -68080179 - L1P3 LINE L1 -835 5319 4668 4965 62 29 0 chr5 135005353 135006010 -68079522 + L1PA7 LINE L1 5479 6154 0 372 302 183 38 chr5 135006086 135006523 -68079009 + MLT1H LTR MaLR 5 549 0 200 363 53 9 chr5 135006830 135006943 -68078589 + MIR3 SINE MIR 90 207 -1 25529 142 20 20 chr5 135008308 135013878 -68071654 - L1PA8A LINE L1 -4 6442 817 203 286 61 0 chr5 135014193 135014242 -68071290 - L2 LINE L2 -82 3190 3139 238 250 19 0 chr5 135014416 135014468 -68071064 + L2 LINE L2 3209 3261 -11 24 0 0 0 chr5 135015438 135015462 -68070070 + AT_rich Low_complexity Low_complexity 1 24 0 336 148 0 0 chr5 135016137 135016198 -68069334 + (CA)n Simple_repeat Simple_repeat 2 62 0 290 256 54 31 chr5 135016671 135016800 -68068732 + MER112 DNA MER1_type 119 250 -10 206 296 132 31 chr5 135016888 135017047 -68068485 - MIR SINE MIR -60 202 28 492 268 12 77 chr5 135017701 135017869 -68067663 + MLT1F1 LTR MaLR 5 161 -406 215 73 49 0 chr5 135017891 135017932 -68067600 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 756 337 94 14 chr5 135018138 135018551 -68066981 - LTR16C LTR ERVL -14 477 32 4604 145 16 6 chr5 135022844 135023644 -68061888 - L1PA16 LINE L1 -2 6164 5357 4301 132 12 6 chr5 135023645 135024363 -68061169 - L1PB1 LINE L1 0 6867 6145 11648 191 94 16 chr5 135024523 135030165 -68055367 - L1PB1 LINE L1 -743 6119 33 5010 215 22 3 chr5 135030169 135031419 -68054113 - L1 LINE L1 -779 6083 4810 29026 94 9 5 chr5 135031419 135036606 -68048926 + L1PA8 LINE L1 971 6172 0 1031 184 63 0 chr5 135036690 135036897 -68048635 + MER34B LTR ERV1 1 220 -345 2931 153 34 8 chr5 135036910 135037405 -68048127 - MER41E LTR ERV1 -4 508 1 1538 171 42 0 chr5 135037488 135037798 -68047734 + MER34B LTR ERV1 226 548 -17 22 56 0 0 chr5 135038216 135038252 -68047280 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 135038328 135038365 -68047167 + AT_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr5 135039933 135039977 -68045555 + AT_rich Low_complexity Low_complexity 1 44 0 5514 160 7 21 chr5 135040118 135042222 -68043310 - L1PB1 LINE L1 0 6151 4075 1775 205 44 24 chr5 135042724 135043177 -68042355 - MLT1C LTR MaLR 0 467 6 1976 136 0 10 chr5 135043427 135043721 -68041811 + AluSx SINE Alu 1 291 -21 653 325 43 12 chr5 135043775 135044120 -68041412 + HERV16 LTR ERVL 960 1315 -3681 1518 312 65 53 chr5 135044408 135044463 -68041069 + HERV16 LTR ERVL 1701 1754 -3242 765 178 0 22 chr5 135044463 135044598 -68040934 - FLAM_C SINE Alu -1 132 1 1518 312 65 53 chr5 135044598 135044701 -68040831 + HERV16 LTR ERVL 1754 1854 -3142 1538 193 0 15 chr5 135044701 135044971 -68040561 - AluJo SINE Alu -25 287 22 1518 312 65 53 chr5 135044971 135045804 -68039728 + HERV16 LTR ERVL 1854 2704 -2292 414 269 53 79 chr5 135045906 135046133 -68039399 + HERV16 LTR ERVL 2859 3079 -1917 192 286 71 14 chr5 135047021 135047091 -68038441 - L2 LINE L2 -36 3236 3163 418 308 48 0 chr5 135048193 135048339 -68037193 - MIR SINE MIR -21 241 89 1976 223 61 24 chr5 135048444 135049064 -68036468 + L1ME1 LINE L1 5283 5925 -241 2368 54 47 0 chr5 135049465 135049761 -68035771 - AluY SINE Alu -1 310 1 341 243 0 81 chr5 135051678 135051826 -68033706 - MER103 DNA DNA -16 150 15 758 296 137 27 chr5 135052296 135052698 -68032834 - LTR16B LTR ERVL -2 462 17 366 331 95 22 chr5 135052759 135053076 -68032456 + L1ME4a LINE L1 5782 6121 0 205 286 117 13 chr5 135053346 135053423 -68032109 + L2 LINE L2 1199 1283 -2031 460 231 124 6 chr5 135053442 135053611 -68031921 - MER112 DNA MER1_type 0 260 72 234 0 0 0 chr5 135053628 135053654 -68031878 + (TG)n Simple_repeat Simple_repeat 2 27 0 2576 278 104 66 chr5 135053718 135055213 -68030319 + L2 LINE L2 1298 2848 -466 255 61 0 0 chr5 135055222 135055255 -68030277 + (TG)n Simple_repeat Simple_repeat 2 34 0 5053 79 27 0 chr5 135055268 135055965 -68029567 - HERVK9 LTR ERVK -418 5498 4783 * 6328 63 0 0 chr5 135055962 135056786 -68028746 - HERVK9 LTR ERVK -1381 4535 3712 11856 57 1 1 chr5 135056787 135058315 -68027217 - HERVK9 LTR ERVK -3130 2786 1259 4392 69 5 10 chr5 135058307 135058902 -68026630 - HERVK9 LTR ERVK -5324 592 1 * 3296 102 51 10 chr5 135058902 135059393 -68026139 - MER9 LTR ERVK 0 511 1 302 198 64 32 chr5 135059396 135059553 -68025979 + (TA)n Simple_repeat Simple_repeat 2 163 0 208 167 0 24 chr5 135059672 135059714 -68025818 + CT-rich Low_complexity Low_complexity 1 41 0 258 81 0 0 chr5 135060863 135060900 -68024632 + (TG)n Simple_repeat Simple_repeat 1 37 0 278 270 100 0 chr5 135111366 135111466 -67974066 - L1ME LINE L1 -5917 153 44 465 284 84 13 chr5 135111503 135111658 -67973874 - L2 LINE L2 -1177 2137 1972 180 0 0 0 chr5 135111871 135111891 -67973641 + (T)n Simple_repeat Simple_repeat 1 20 0 255 340 46 89 chr5 135111967 135112249 -67973283 + L2 LINE L2 2976 3245 -27 205 86 29 0 chr5 135113164 135113199 -67972333 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 233 379 112 28 chr5 135115343 135115557 -67969975 - L2 LINE L2 -10 3262 3031 473 279 33 70 chr5 135116003 135116247 -67969285 - L2 LINE L2 0 3313 3079 * 1144 266 94 59 chr5 135116232 135116743 -67968789 - L2 LINE L2 -1002 2312 1784 379 265 15 38 chr5 135116748 135116880 -67968652 - MER94 DNA DNA 0 134 6 652 252 126 17 chr5 135116884 135117114 -67968418 - L1MC4 LINE L1 -1012 7030 6776 267 305 116 11 chr5 135118533 135118628 -67966904 + MIR SINE MIR 41 145 -63 1764 218 90 13 chr5 135118628 135119123 -67966409 - MER77 LTR ERV1 0 605 46 2133 89 0 14 chr5 135119370 135119680 -67965852 - AluSc SINE Alu 0 306 1 2964 148 25 14 chr5 135120344 135120904 -67964628 + L1PA16 LINE L1 5598 6163 -3 204 338 70 0 chr5 135120958 135121029 -67964503 - L2 LINE L2 -47 3225 3150 1121 237 115 32 chr5 135122372 135122932 -67962600 - MLT1D LTR MaLR -3 502 1 663 180 8 23 chr5 135123215 135123343 -67962189 + LTR40b LTR ERVL 302 427 -35 247 323 105 40 chr5 135123839 135123963 -67961569 + MIR3 SINE MIR 52 183 -25 427 306 41 70 chr5 135124019 135124362 -67961170 - L1M4 LINE L1 -3150 2996 2664 329 259 140 40 chr5 135124510 135124738 -67960794 - L1M4 LINE L1 -3747 2399 2149 24605 27 2 2 chr5 135125272 135128991 -67956541 + L1PA2 LINE L1 2419 6154 -1 377 333 27 7 chr5 135129006 135129156 -67956376 - MIR SINE MIR -42 220 68 2512 265 75 18 chr5 135129260 135130977 -67954555 - L1MCa LINE L1 -2941 3485 1503 297 20 39 20 chr5 135131692 135131743 -67953789 + (TTTTTA)n Simple_repeat Simple_repeat 2 53 0 2861 16 0 0 chr5 135131861 135132175 -67953357 - AluYb8 SINE Alu -4 314 1 257 333 42 10 chr5 135132481 135132577 -67952955 - MIR SINE MIR -115 147 49 1735 179 10 7 chr5 135133376 135133684 -67951848 + AluJb SINE Alu 1 309 -3 2190 144 15 20 chr5 135133834 135134237 -67951295 - L1M2 LINE L1 -604 6647 6247 784 171 0 0 chr5 135134237 135134377 -67951155 - AluJb SINE Alu 0 312 173 338 70 0 0 chr5 135134427 135134470 -67951062 - AluSp SINE Alu -130 173 131 1272 199 12 9 chr5 135134475 135134816 -67950716 - L1M2 LINE L1 -856 6250 5740 * 4499 218 134 59 chr5 135134797 135139047 -67946485 - L1M2 LINE L1 -2804 4302 1 310 192 26 39 chr5 135139055 135139133 -67946399 - L1ME LINE L1 -495 5675 5599 26 0 0 0 chr5 135139144 135139170 -67946362 + AT_rich Low_complexity Low_complexity 1 26 0 292 280 27 0 chr5 135139189 135139264 -67946268 - MER21B LTR ERV1 -775 88 12 616 239 176 10 chr5 135139285 135139678 -67945854 - L1ME LINE L1 -553 5609 5149 21 0 0 0 chr5 135140390 135140411 -67945121 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr5 135140974 135140999 -67944533 + (TATG)n Simple_repeat Simple_repeat 2 26 0 188 274 192 62 chr5 135141885 135142031 -67943501 + L2 LINE L2 3132 3296 -17 192 299 91 26 chr5 135142356 135142433 -67943099 + MIR SINE MIR 22 103 -105 224 162 0 81 chr5 135142533 135142607 -67942925 + A-rich Low_complexity Low_complexity 1 68 0 230 257 0 40 chr5 135143273 135143347 -67942185 + MIR SINE MIR 77 147 -115 1713 183 82 8 chr5 135144090 135144468 -67941064 + L1MA6 LINE L1 5895 6300 0 22 56 0 0 chr5 135144487 135144523 -67941009 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 135145655 135145678 -67939854 + AT_rich Low_complexity Low_complexity 1 23 0 737 240 48 39 chr5 135145776 135145984 -67939548 - MER58A DNA MER1_type -14 210 1 538 255 142 77 chr5 135146092 135146829 -67938703 - HAL1 LINE L1 -175 2332 1438 1090 244 131 52 chr5 135147178 135147244 -67938288 - MLT1C LTR MaLR -1 466 407 2221 85 14 3 chr5 135147244 135147539 -67937993 + AluSg SINE Alu 1 298 -12 1090 244 131 52 chr5 135147539 135147899 -67937633 - MLT1C LTR MaLR -60 407 6 434 261 368 25 chr5 135148165 135148448 -67937084 - L2 LINE L2 0 3313 2934 1181 302 103 18 chr5 135148486 135148983 -67936549 - L2 LINE L2 -579 2735 2197 195 313 39 60 chr5 135149156 135149338 -67936194 + L2 LINE L2 3136 3313 0 23 33 0 0 chr5 135149857 135149887 -67935645 + AT_rich Low_complexity Low_complexity 1 30 0 31 58 0 0 chr5 135149958 135150010 -67935522 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 135150059 135150080 -67935452 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 135151855 135151883 -67933649 + AT_rich Low_complexity Low_complexity 1 28 0 2163 98 34 0 chr5 135151964 135152140 -67933392 - AluSg SINE Alu -4 306 115 188 33 0 33 chr5 135152140 135152170 -67933362 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2163 98 34 0 chr5 135152170 135152289 -67933243 - AluSg SINE Alu -195 115 1 1248 280 80 3 chr5 135153143 135153518 -67932014 - MLT1J2 LTR MaLR -32 418 15 610 252 198 29 chr5 135154766 135155004 -67930528 - MLT1J2 LTR MaLR -162 288 11 236 30 30 0 chr5 135155229 135155262 -67930270 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5658 22 0 0 chr5 135155264 135155913 -67929619 - L1PA4 LINE L1 -8 6147 5499 2114 110 39 0 chr5 135156114 135156396 -67929136 + AluSx SINE Alu 1 293 -19 948 185 0 13 chr5 135157466 135157623 -67927909 - FRAM SINE Alu -22 154 1 22 0 0 0 chr5 135157915 135157937 -67927595 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 135158033 135158054 -67927478 + AT_rich Low_complexity Low_complexity 1 21 0 2093 125 7 3 chr5 135158612 135158908 -67926624 + AluSx SINE Alu 1 297 -15 225 83 0 0 chr5 135159008 135159044 -67926488 - L1MC4 LINE L1 -1 8041 8006 1652 294 40 33 chr5 135159185 135159336 -67926196 - L1MEc LINE L1 -5607 789 641 796 222 57 24 chr5 135159336 135159548 -67925984 + MER20 DNA MER1_type 1 219 0 1652 294 40 33 chr5 135159548 135160116 -67925416 - L1MEc LINE L1 -5755 641 65 460 179 0 0 chr5 135160138 135160216 -67925316 - L1MC4 LINE L1 -1037 7005 6928 553 253 42 36 chr5 135160219 135160385 -67925147 - L1MC4 LINE L1 -1521 6521 6355 1827 241 25 58 chr5 135160398 135160962 -67924570 + L1M4 LINE L1 1 545 -5997 364 152 76 0 chr5 135160971 135161050 -67924482 - L1M4 LINE L1 -5349 1193 1109 330 198 44 44 chr5 135161079 135161170 -67924362 + L1M4 LINE L1 864 954 -5588 2568 204 103 11 chr5 135161179 135161915 -67923617 + L1M4 LINE L1 581 1539 -5003 1871 200 106 12 chr5 135161928 135162418 -67923114 + L1MB7 LINE L1 5630 6165 -19 2116 243 60 88 chr5 135162434 135163513 -67922019 - L1MC4a LINE L1 -1506 6302 5254 1647 152 65 4 chr5 135163767 135164044 -67921488 - AluSq SINE Alu -19 294 1 2249 109 0 0 chr5 135164105 135164409 -67921123 - AluSx SINE Alu -8 304 1 841 311 77 24 chr5 135165492 135165946 -67919586 - L1MCc LINE L1 -5914 509 32 616 251 30 18 chr5 135166064 135166231 -67919301 + LTR40c LTR ERVL 1 169 -296 1287 237 64 64 chr5 135166325 135166718 -67918814 + MER77 LTR ERV1 1 393 -212 1899 204 125 30 chr5 135166741 135167179 -67918353 + MER77 LTR ERV1 63 555 -50 2310 82 3 20 chr5 135167179 135167483 -67918049 - AluSp SINE Alu -14 299 1 1899 204 125 30 chr5 135167483 135167540 -67917992 + MER77 LTR ERV1 555 605 0 780 184 17 46 chr5 135167543 135167717 -67917815 + LTR40a LTR ERVL 347 515 -4 1119 206 61 87 chr5 135167793 135168103 -67917429 - AluJo SINE Alu 0 302 1 531 244 109 57 chr5 135168146 135168339 -67917193 + MLT1J1 LTR MaLR 3 205 -241 251 232 71 20 chr5 135168409 135168508 -67917024 + MLT1J1 LTR MaLR 343 446 0 622 329 133 9 chr5 135169701 135170032 -67915500 + MLT1J1 LTR MaLR 1 372 -74 226 284 49 25 chr5 135170014 135170095 -67915437 + MLT1J2 LTR MaLR 361 443 -7 * 24 67 0 0 chr5 135170374 135170419 -67915113 + AT_rich Low_complexity Low_complexity 1 45 0 452 281 235 21 chr5 135171063 135171348 -67914184 + L2 LINE L2 2956 3301 -12 320 222 32 0 chr5 135171411 135171474 -67914058 - L2 LINE L2 -678 2636 2572 586 305 25 15 chr5 135171474 135171671 -67913861 - L2 LINE L2 -1934 1380 1182 481 316 83 26 chr5 135171845 135172348 -67913184 - L1M4 LINE L1 -1732 4414 3883 1654 177 60 0 chr5 135172554 135172836 -67912696 - AluJo SINE Alu -12 300 2 2204 135 0 0 chr5 135173489 135173801 -67911731 - AluSx SINE Alu 0 312 1 791 200 0 0 chr5 135173990 135174125 -67911407 - MER58A DNA MER1_type -1 223 89 7451 184 3 1 chr5 135174136 135176342 -67909190 - L1PA15 LINE L1 -1 7602 5389 * 18548 40 3 2 chr5 135176337 135179435 -67906097 - L1PA4 LINE L1 -3 6152 3049 6214 42 1 0 chr5 135179439 135180219 -67905313 + L1PA4 LINE L1 2266 3046 -3100 * 10842 212 21 16 chr5 135180214 135183279 -67902253 - L1PA15 LINE L1 -2179 5405 2319 454 323 33 17 chr5 135184542 135184842 -67900690 - L1PA15 LINE L1 -7269 312 8 264 275 43 0 chr5 135184854 135184923 -67900609 - MER58A DNA MER1_type -23 84 13 296 241 13 0 chr5 135185151 135185230 -67900302 - HAL1b LINE L1 -508 840 761 251 328 0 0 chr5 135185251 135185309 -67900223 - MIR SINE MIR -153 109 52 1807 191 31 3 chr5 135185340 135185695 -67899837 - MLT1A1 LTR MaLR 0 365 1 456 366 98 16 chr5 135185702 135186162 -67899370 + L1M4 LINE L1 3634 4166 -1980 387 41 0 0 chr5 135187762 135187811 -67897721 + (TG)n Simple_repeat Simple_repeat 2 50 0 652 157 0 0 chr5 135187819 135187927 -67897605 - FLAM_C SINE Alu -33 110 3 232 105 26 0 chr5 135187970 135188008 -67897524 + L1MC5 LINE L1 7193 7231 -730 1097 200 5 10 chr5 135188074 135188279 -67897253 - AluJo SINE Alu -105 207 4 377 268 148 0 chr5 135188735 135188832 -67896700 + MIR SINE MIR 90 216 -46 378 0 0 0 chr5 135188832 135188874 -67896658 + (TG)n Simple_repeat Simple_repeat 2 43 0 377 268 148 0 chr5 135188874 135188918 -67896614 + MIR SINE MIR 216 252 -10 327 293 93 67 chr5 135190842 135191218 -67894314 + MLT1K LTR MaLR 195 580 -8 460 212 124 22 chr5 135192340 135192477 -67893055 + MER103 DNA DNA 13 163 -3 186 43 0 0 chr5 135193165 135193188 -67892344 + (TG)n Simple_repeat Simple_repeat 2 24 0 27 0 0 0 chr5 135194862 135194889 -67890643 + AT_rich Low_complexity Low_complexity 1 27 0 237 281 73 0 chr5 135197621 135197703 -67887829 - MIR3 SINE MIR -12 196 109 196 362 96 10 chr5 135198017 135198216 -67887316 + L2 LINE L2 2869 3084 -188 207 0 0 0 chr5 135198475 135198498 -67887034 + (A)n Simple_repeat Simple_repeat 1 23 0 276 280 84 28 chr5 135198852 135198995 -67886537 - L2 LINE L2 -8 3305 3155 219 167 24 0 chr5 135199115 135199157 -67886375 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr5 135200895 135200917 -67884615 + AT_rich Low_complexity Low_complexity 1 22 0 785 244 84 4 chr5 135201430 135201484 -67884048 - MIR SINE MIR -3 259 211 243 0 0 0 chr5 135201484 135201511 -67884021 + (TG)n Simple_repeat Simple_repeat 2 28 0 785 244 84 4 chr5 135201511 135201694 -67883838 - MIR SINE MIR -51 211 3 209 250 0 0 chr5 135202342 135202382 -67883150 + MIR SINE MIR 223 262 0 315 323 94 21 chr5 135205024 135205216 -67880316 + L3b LINE CR1 1267 1472 -111 467 248 23 16 chr5 135205928 135206057 -67879475 + L2 LINE L2 3184 3313 0 304 309 170 55 chr5 135207872 135208202 -67877330 - L1M2 LINE L1 -5703 1146 779 202 224 0 20 chr5 135208674 135208723 -67876809 + CT-rich Low_complexity Low_complexity 2 49 0 351 306 36 51 chr5 135209834 135210030 -67875502 + MLT1K LTR MaLR 2 194 -394 1852 107 12 83 chr5 135210117 135210249 -67875283 + AluSg SINE Alu 1 141 -169 225 0 0 0 chr5 135210249 135210274 -67875258 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1852 107 12 83 chr5 135210274 135210468 -67875064 + AluSg SINE Alu 141 304 -6 238 274 0 14 chr5 135210607 135210680 -67874852 + LTR67 LTR ERVL 485 556 -1 21 36 0 0 chr5 135211536 135211564 -67873968 + AT_rich Low_complexity Low_complexity 1 28 0 864 39 0 0 chr5 135213334 135213437 -67872095 + AluY SINE Alu 205 307 -4 1915 142 0 33 chr5 135214117 135214420 -67871112 - AluSq SINE Alu -20 293 1 626 219 88 36 chr5 135215092 135215284 -67870248 - MIR SINE MIR -23 239 38 552 298 71 21 chr5 135215533 135215771 -67869761 + MIR SINE MIR 13 262 0 3591 227 60 25 chr5 135215943 135217742 -67867790 - L1ME2 LINE L1 -9 6155 4296 457 221 145 28 chr5 135217901 135218046 -67867486 - MLT1H LTR MaLR -5 544 383 25 0 0 0 chr5 135218411 135218436 -67867096 + AT_rich Low_complexity Low_complexity 1 25 0 694 305 101 57 chr5 135218470 135219320 -67866212 + L2 LINE L2 2327 3205 -67 1690 226 46 6 chr5 135219835 135220339 -67865193 - L1M4 LINE L1 -1327 4819 4296 328 200 192 31 chr5 135220501 135220631 -67864901 - MLT1H LTR MaLR -16 533 383 25 0 0 0 chr5 135220993 135221018 -67864514 + AT_rich Low_complexity Low_complexity 1 25 0 647 319 91 62 chr5 135221052 135221913 -67863619 + L2 LINE L2 2327 3205 -67 203 237 13 26 chr5 135222880 135222956 -67862576 + A-rich Low_complexity Low_complexity 3 77 0 2677 121 35 13 chr5 135223459 135223857 -67861675 - MER1A DNA MER1_type 0 529 123 777 131 49 0 chr5 135224043 135224165 -67861367 - MER1A DNA MER1_type -399 128 1 1395 182 146 10 chr5 135225674 135225976 -67859556 - MER2 DNA MER2_type 0 344 2 1995 134 6 34 chr5 135227146 135227466 -67858066 - AluSx SINE Alu -1 311 1 2245 107 3 0 chr5 135228754 135229054 -67856478 - AluSp SINE Alu -8 305 5 1245 159 9 0 chr5 135229426 135229646 -67855886 + LTR9B LTR ERV1 423 644 0 705 300 55 10 chr5 135229685 135229978 -67855554 - L1MC/D LINE L1 -2161 5647 5342 28 0 0 0 chr5 135230153 135230181 -67855351 + AT_rich Low_complexity Low_complexity 1 28 0 2209 102 0 3 chr5 135230897 135231211 -67854321 - AluSq SINE Alu 0 313 1 1880 159 0 23 chr5 135231213 135231514 -67854018 - AluJb SINE Alu -18 294 1 23 68 0 0 chr5 135231514 135231558 -67853974 + AT_rich Low_complexity Low_complexity 1 44 0 552 240 94 6 chr5 135231824 135232032 -67853500 - MIR SINE MIR -10 252 33 415 209 289 40 chr5 135233314 135233515 -67852017 + MIR SINE MIR 12 262 0 946 196 0 0 chr5 135235356 135235514 -67850018 + FRAM SINE Alu 1 158 -8 183 333 0 0 chr5 135235613 135235667 -67849865 - L3 LINE CR1 -10 1567 1514 1172 196 98 35 chr5 135235697 135236013 -67849519 + LTR40c LTR ERVL 130 465 0 210 250 118 13 chr5 135236357 135236433 -67849099 + L2 LINE L2 3229 3312 -1 23 33 0 0 chr5 135236558 135236588 -67848944 + AT_rich Low_complexity Low_complexity 1 30 0 556 245 21 11 chr5 135236705 135236893 -67848639 - L1MC5 LINE L1 -48 7913 7724 207 0 0 0 chr5 135237393 135237416 -67848116 + (CA)n Simple_repeat Simple_repeat 2 24 0 1918 186 137 24 chr5 135237656 135237702 -67847830 - MLT2B1 LTR ERVL 0 520 481 432 0 0 0 chr5 135237702 135237750 -67847782 + (TG)n Simple_repeat Simple_repeat 2 49 0 240 35 0 0 chr5 135237750 135237779 -67847753 + (GA)n Simple_repeat Simple_repeat 2 30 0 1918 186 137 24 chr5 135237779 135238198 -67847334 - MLT2B1 LTR ERVL -38 482 1 1165 112 126 142 chr5 135238441 135238807 -67846725 - MER46B DNA MER2_type 0 236 2 31 0 0 0 chr5 135239436 135239467 -67846065 + AT_rich Low_complexity Low_complexity 1 31 0 2533 216 41 25 chr5 135242152 135242792 -67842740 + L1ME1 LINE L1 5444 6093 -73 206 242 32 32 chr5 135242944 135243006 -67842526 - L3 LINE CR1 -322 1255 1194 1303 215 120 18 chr5 135243715 135244166 -67841366 - LTR54B LTR ERV1 -1 497 1 3821 162 67 6 chr5 135245651 135246294 -67839238 + MER54B LTR ERVL 1 682 -111 591 235 134 43 chr5 135246614 135246801 -67838731 + MER3 DNA MER1_type 6 209 0 349 248 32 93 chr5 135248219 135248465 -67837067 - L1ME4a LINE L1 -224 5897 5667 1215 177 27 75 chr5 135248749 135249077 -67836455 - MLT1A1 LTR MaLR -4 386 1 181 344 70 76 chr5 135249078 135249407 -67836125 - L2 LINE L2 -80 3192 2866 239 214 18 0 chr5 135249552 135249608 -67835924 - L1ME4a LINE L1 -704 5538 5482 387 285 131 7 chr5 135250499 135250636 -67834896 + MLT1I LTR MaLR 27 180 -229 613 324 57 33 chr5 135251486 135251819 -67833713 - MLT1L LTR MaLR -21 594 254 352 265 238 7 chr5 135251834 135251981 -67833551 + MER5A DNA MER1_type 9 189 0 306 253 13 0 chr5 135251999 135252074 -67833458 - MLT1J LTR MaLR -340 171 96 22 0 0 0 chr5 135254253 135254275 -67831257 + AT_rich Low_complexity Low_complexity 1 22 0 288 0 0 0 chr5 135254275 135254307 -67831225 + (TG)n Simple_repeat Simple_repeat 1 32 0 827 232 39 19 chr5 135255356 135255563 -67829969 - MER20 DNA MER1_type -8 211 1 327 49 0 0 chr5 135256384 135256425 -67829107 + (TG)n Simple_repeat Simple_repeat 2 42 0 184 239 87 0 chr5 135257032 135257078 -67828454 - L2 LINE L2 -14 3299 3250 232 203 34 34 chr5 135257526 135257585 -67827947 + MIR3 SINE MIR 148 206 -2 840 206 19 29 chr5 135257824 135258033 -67827499 + MER106A DNA MER1_type 29 235 -1 444 287 58 12 chr5 135258525 135258732 -67826800 + MIR SINE MIR 1 217 -45 206 100 0 50 chr5 135259727 135259767 -67825765 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 180 77 0 0 chr5 135260670 135260696 -67824836 + (T)n Simple_repeat Simple_repeat 1 26 0 574 288 66 16 chr5 135260717 135260974 -67824558 - L1ME4a LINE L1 -78 6043 5774 2340 105 0 0 chr5 135261219 135261532 -67824000 - AluSq SINE Alu 0 313 1 2075 154 53 27 chr5 135261558 135262090 -67823442 - MLT2A2 LTR ERVL -1 553 1 24 67 0 0 chr5 135262838 135262883 -67822649 + AT_rich Low_complexity Low_complexity 1 45 0 1066 257 43 63 chr5 135263010 135263507 -67822025 - L1ME2 LINE L1 0 6162 5677 1530 190 23 11 chr5 135263535 135263882 -67821650 - L1MA9 LINE L1 0 6312 5962 3288 139 16 13 chr5 135263889 135264441 -67821091 + L1MA9 LINE L1 5377 5930 -382 303 276 23 0 chr5 135264458 135264545 -67820987 - L1ME2 LINE L1 -473 5691 5603 * 438 246 75 2 chr5 135264526 135264676 -67820856 - L1M3 LINE L1 -695 5476 5320 303 234 11 0 chr5 135264701 135264795 -67820737 - L1MA10 LINE L1 -14 6320 6226 1051 258 68 8 chr5 135264839 135265234 -67820298 - L1ME2 LINE L1 -155 6009 5591 1483 222 55 16 chr5 135265257 135265708 -67819824 - L1M3 LINE L1 -897 5249 4781 302 221 103 0 chr5 135266026 135266094 -67819438 - L2 LINE L2 -1 3312 3238 1867 159 3 3 chr5 135266417 135266706 -67818826 - AluJo SINE Alu -23 289 1 669 259 119 15 chr5 135267304 135267505 -67818027 - MER58A DNA MER1_type -1 223 2 2458 175 26 28 chr5 135267623 135268035 -67817497 + L1MA3 LINE L1 4919 5331 -974 725 190 0 0 chr5 135268035 135268156 -67817376 + FLAM_A SINE Alu 1 121 -12 2458 175 26 28 chr5 135268156 135268667 -67816865 + L1MA3 LINE L1 5331 5840 -465 5146 153 28 43 chr5 135268784 135268955 -67816577 + L1MA4 LINE L1 5156 5328 -972 725 190 0 0 chr5 135268955 135269076 -67816456 + FLAM_A SINE Alu 1 121 -12 5146 153 28 43 chr5 135269076 135270063 -67815469 + L1MA4 LINE L1 5328 6299 -1 375 320 48 39 chr5 135270670 135270876 -67814656 - L2 LINE L2 -31 3282 3075 241 231 0 0 chr5 135270908 135270960 -67814572 + (TG)n Simple_repeat Simple_repeat 1 52 0 1751 88 8 32 chr5 135270994 135271243 -67814289 + AluSg/x SINE Alu 68 310 0 328 295 62 99 chr5 135271243 135271663 -67813869 - L2 LINE L2 -252 3061 2644 249 108 0 0 chr5 135272537 135272574 -67812958 + (TG)n Simple_repeat Simple_repeat 2 38 0 289 93 0 23 chr5 135273895 135273938 -67811594 + MSTC LTR MaLR 12 53 -375 929 189 73 62 chr5 135273982 135274257 -67811275 + L1MD2 LINE L1 6081 6358 -1 747 32 0 0 chr5 135274847 135274941 -67810591 + (TTTTA)n Simple_repeat Simple_repeat 2 95 0 1445 133 81 12 chr5 135274952 135275067 -67810465 - AluSq SINE Alu -48 265 159 2203 141 0 0 chr5 135275067 135275373 -67810159 - AluSc SINE Alu -3 306 1 1445 133 81 12 chr5 135275373 135275505 -67810027 - AluSq SINE Alu -154 159 1 338 289 79 12 chr5 135275520 135275727 -67809805 - MLT1D LTR MaLR -145 360 149 662 255 58 54 chr5 135278117 135278395 -67807137 - MER102b DNA MER1_type -44 297 19 969 265 125 0 chr5 135279633 135280062 -67805470 - LTR50 LTR ERVL -220 575 1 21 57 0 0 chr5 135280109 135280144 -67805388 + AT_rich Low_complexity Low_complexity 1 35 0 558 275 53 45 chr5 135280383 135280818 -67804714 - MLT1J LTR MaLR -4 507 4 2463 79 3 0 chr5 135281148 135281477 -67804055 - L1PA6 LINE L1 -6 6148 5819 2315 96 23 0 chr5 135282492 135282795 -67802737 - AluSq SINE Alu -3 310 1 1467 145 84 0 chr5 135282810 135283072 -67802460 + L1PA16 LINE L1 5881 6164 -2 561 325 56 9 chr5 135283324 135283555 -67801977 + MIR SINE MIR 11 252 -10 261 83 0 0 chr5 135283651 135283687 -67801845 + (TG)n Simple_repeat Simple_repeat 1 36 0 378 115 0 0 chr5 135283687 135283748 -67801784 + (GA)n Simple_repeat Simple_repeat 2 62 0 395 250 42 7 chr5 135284968 135285112 -67800420 + Charlie4 DNA MER1_type 1813 1961 0 297 0 0 0 chr5 135285471 135285504 -67800028 + (TG)n Simple_repeat Simple_repeat 2 34 0 294 148 26 8 chr5 135287779 135287868 -67797664 + Alu SINE Alu 1 44 -258 1768 123 120 0 chr5 135287921 135288197 -67797335 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 135290163 135290191 -67795341 + AT_rich Low_complexity Low_complexity 1 28 0 1079 228 15 100 chr5 135291041 135291440 -67794092 - MLT1A1 LTR MaLR 0 365 1 362 271 97 62 chr5 135291450 135291594 -67793938 - MIR SINE MIR -51 211 63 397 357 59 66 chr5 135291748 135292157 -67793375 - L2 LINE L2 -44 3228 2823 1587 309 177 21 chr5 135292185 135293328 -67792204 - L2 LINE L2 -671 2643 1323 2576 34 0 0 chr5 135293413 135293705 -67791827 + AluY SINE Alu 1 292 -19 304 287 58 22 chr5 135296745 135296865 -67788667 + MIR SINE MIR 33 163 -45 461 291 40 0 chr5 135296975 135297126 -67788406 + MIR SINE MIR 105 261 -1 225 314 49 10 chr5 135297976 135298078 -67787454 - MER102b DNA MER1_type -3 338 233 195 298 0 0 chr5 135298818 135298865 -67786667 + L2 LINE L2 3211 3257 -15 242 320 0 0 chr5 135299287 135299362 -67786170 + MER91B DNA MER1_type 112 186 -4 4586 52 12 2 chr5 135300110 135300683 -67784849 - L1PA5 LINE L1 -2 6152 5574 1813 35 0 0 chr5 135300683 135300913 -67784619 - L1PA5 LINE L1 -990 5156 4927 963 215 178 40 chr5 135301415 135301793 -67783739 - L1ME1 LINE L1 -6 6160 5728 2115 114 23 0 chr5 135301802 135302101 -67783431 - AluSx SINE Alu -6 306 1 2080 82 4 11 chr5 135302208 135302488 -67783044 + AluY SINE Alu 17 294 -17 2586 233 80 38 chr5 135303934 135304701 -67780831 - MER21B LTR ERV1 -57 806 8 399 253 0 0 chr5 135304710 135304789 -67780743 - MER21B LTR ERV1 -773 90 12 24 32 0 0 chr5 135304873 135304904 -67780628 + AT_rich Low_complexity Low_complexity 1 31 0 23 78 0 0 chr5 135305023 135305074 -67780458 + AT_rich Low_complexity Low_complexity 1 51 0 382 267 132 7 chr5 135305215 135305496 -67780036 - HAL1b LINE L1 -247 1101 786 1729 179 3 23 chr5 135305506 135305808 -67779724 - AluJo SINE Alu -16 296 1 363 290 23 0 chr5 135305957 135306088 -67779444 + MER94 DNA DNA 1 134 0 2395 67 0 0 chr5 135306515 135306813 -67778719 + AluY SINE Alu 1 298 -13 214 332 217 30 chr5 135309475 135309876 -67775656 + L2 LINE L2 1527 2002 -1312 194 333 41 41 chr5 135310100 135310223 -67775309 + L2 LINE L2 2266 2388 -926 369 294 42 7 chr5 135310555 135310698 -67774834 - L1MCc LINE L1 -6259 164 17 701 231 195 4 chr5 135310729 135310980 -67774552 - LTR16C LTR ERVL -5 486 188 7260 81 2 6 chr5 135311512 135313295 -67772237 - L1PA7 LINE L1 -1 6153 4364 36 70 0 0 chr5 135313787 135313858 -67771674 + AT_rich Low_complexity Low_complexity 1 71 0 317 351 72 5 chr5 135313995 135314217 -67771315 - Charlie8 DNA MER1_type -2131 286 50 182 345 0 17 chr5 135314431 135314489 -67771043 - L3b LINE CR1 -5 1578 1522 186 233 0 0 chr5 135316182 135316242 -67769290 + T-rich Low_complexity Low_complexity 1 60 0 539 300 69 30 chr5 135317796 135318029 -67767503 - MIR SINE MIR -16 246 5 5809 119 30 0 chr5 135319161 135320683 -67764849 - L1PA15 LINE L1 -2 6163 4627 1940 114 17 23 chr5 135320694 135320993 -67764539 - AluSq SINE Alu -16 297 1 23 33 0 0 chr5 135321124 135321154 -67764378 + AT_rich Low_complexity Low_complexity 1 30 0 544 223 8 8 chr5 135322010 135322140 -67763392 + MLT1E2 LTR MaLR 1 130 -375 902 268 116 16 chr5 135322175 135322545 -67762987 + MLT1E2 LTR MaLR 220 626 0 451 276 35 94 chr5 135323834 135324269 -67761263 - MLT1J1 LTR MaLR -11 435 27 1456 191 52 0 chr5 135325266 135325518 -67760014 + AluJo SINE Alu 30 294 -18 533 273 188 43 chr5 135327348 135327604 -67757928 - L2 LINE L2 -2719 595 303 804 278 0 0 chr5 135327633 135327806 -67757726 + MER45A DNA AcHobo 1 173 -5 303 280 50 81 chr5 135328502 135328859 -67756673 - L1M4 LINE L1 -1290 4856 4511 411 140 103 0 chr5 135330004 135330111 -67755421 + L1PA16 LINE L1 6040 6157 -9 1385 207 51 22 chr5 135330627 135331466 -67754066 - L1MD1 LINE L1 -1 6241 5428 674 222 0 15 chr5 135331466 135331601 -67753931 - FLAM_A SINE Alu 0 133 1 1385 207 51 22 chr5 135331601 135331773 -67753759 - L1MD1 LINE L1 -814 5428 5262 2079 124 3 7 chr5 135331773 135332071 -67753461 - AluSx SINE Alu -15 297 1 1385 207 51 22 chr5 135332071 135332327 -67753205 - L1MD1 LINE L1 -980 5262 4901 392 176 15 0 chr5 135332328 135332396 -67753136 + L1MD1 LINE L1 6112 6180 -62 9012 212 8 7 chr5 135332643 135334704 -67750828 - L1M4 LINE L1 -1906 4240 2178 * 16018 115 51 24 chr5 135334701 135337340 -67748192 - L1PBa LINE L1 -4151 2712 3 227 333 13 0 chr5 135337534 135337609 -67747923 - L2 LINE L2 0 3313 3238 246 32 0 0 chr5 135337929 135337960 -67747572 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4978 164 14 7 chr5 135338287 135339112 -67746420 + MER6 DNA MER2_type 32 862 -3 358 67 0 33 chr5 135339515 135339575 -67745957 + (TG)n Simple_repeat Simple_repeat 1 58 0 1156 213 20 0 chr5 135343359 135343612 -67741920 - L1PA16 LINE L1 -7 6159 5902 180 0 0 0 chr5 135344308 135344328 -67741204 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 570 251 176 40 chr5 135344332 135344559 -67740973 + MIR SINE MIR 4 261 -1 318 231 124 31 chr5 135344600 135344849 -67740683 + MLT1J2 LTR MaLR 67 406 -44 384 280 28 19 chr5 135345017 135345124 -67740408 + L2 LINE L2 3197 3304 -9 1189 276 31 18 chr5 135345606 135345998 -67739534 + LTR16A LTR ERVL 30 426 -24 196 237 153 0 chr5 135347138 135347197 -67738335 - MIR SINE MIR -10 252 185 599 327 33 5 chr5 135347414 135347625 -67737907 + MIR SINE MIR 13 229 -33 1156 221 137 14 chr5 135348834 135349191 -67736341 + LTR40b LTR ERVL 1 401 -61 247 293 36 60 chr5 135349546 135349713 -67735819 - L2 LINE L2 -69 3244 3082 237 139 0 0 chr5 135349801 135349844 -67735688 + (T)n Simple_repeat Simple_repeat 1 43 0 314 374 23 18 chr5 135351822 135351993 -67733539 - MER5B DNA MER1_type 0 178 7 30 0 0 0 chr5 135352108 135352138 -67733394 + AT_rich Low_complexity Low_complexity 1 30 0 783 264 82 26 chr5 135352270 135352501 -67733031 - MLT1I LTR MaLR -19 390 147 712 70 0 0 chr5 135352624 135352710 -67732822 + L1PA5 LINE L1 11 96 -6050 37248 52 5 1 chr5 135352710 135358226 -67727306 + L1PA5 LINE L1 623 6152 -2 1585 173 7 14 chr5 135358245 135358554 -67726978 - AluSx SINE Alu 0 307 1 2695 287 109 29 chr5 135358582 135359177 -67726355 - L2 LINE L2 -12 3301 2755 1751 181 3 13 chr5 135359177 135359487 -67726045 + AluJb SINE Alu 1 307 -5 2695 287 109 29 chr5 135359487 135360040 -67725492 - L2 LINE L2 -558 2755 2007 2008 115 88 15 chr5 135360040 135360379 -67725153 + THE1B LTR MaLR 1 364 0 2695 287 109 29 chr5 135360379 135360659 -67724873 - L2 LINE L2 -1306 2007 1751 1272 197 34 18 chr5 135360681 135361049 -67724483 - L1ME LINE L1 -589 5509 5137 287 170 20 70 chr5 135361258 135361358 -67724174 - L1ME LINE L1 -5932 138 44 2767 181 10 32 chr5 135361643 135362235 -67723297 - L1 LINE L1 -1137 4943 4365 266 261 58 14 chr5 135362331 135362400 -67723132 + MER91C DNA MER1_type 27 98 -42 195 69 0 0 chr5 135362472 135362501 -67723031 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr5 135366087 135366110 -67719422 + AT_rich Low_complexity Low_complexity 1 23 0 32 82 0 18 chr5 135366261 135366283 -67719249 + AT_rich Low_complexity Low_complexity 1 22 -86 1630 182 0 21 chr5 135366283 135366574 -67718958 + AluJb SINE Alu 1 285 -27 32 82 0 18 chr5 135366574 135366661 -67718871 + AT_rich Low_complexity Low_complexity 22 108 0 22 35 0 0 chr5 135366782 135366811 -67718721 + AT_rich Low_complexity Low_complexity 1 29 0 336 178 0 14 chr5 135367191 135367264 -67718268 - MLT1K LTR MaLR 0 588 517 639 26 0 0 chr5 135367295 135367372 -67718160 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 536 294 174 53 chr5 135367374 135367735 -67717797 - MLT1K LTR MaLR -173 415 11 261 246 0 0 chr5 135369005 135369066 -67716466 - MER33 DNA MER1_type 0 363 303 552 200 65 45 chr5 135369081 135369236 -67716296 - MER33 DNA MER1_type -164 160 3 9974 205 32 34 chr5 135370548 135374038 -67711494 - L1MA9 LINE L1 -43 7290 3803 2323 273 53 48 chr5 135374035 135375559 -67709973 - L1MA9 LINE L1 -5718 1450 7 * 1086 293 80 16 chr5 135376916 135377404 -67708128 - LTR33 LTR ERVL -2 519 1 218 357 41 71 chr5 135377554 135377750 -67707782 + MIR SINE MIR 17 206 -56 22 0 0 0 chr5 135378469 135378491 -67707041 + AT_rich Low_complexity Low_complexity 1 22 0 1799 183 111 8 chr5 135378832 135379220 -67706312 - MSTA LTR MaLR 0 428 1 5324 239 39 28 chr5 135379223 135380440 -67705092 - L1PBb LINE L1 -3626 3222 1858 1957 131 7 23 chr5 135380440 135380745 -67704787 - AluSc SINE Alu -9 300 1 5324 239 39 28 chr5 135380745 135381593 -67703939 - L1PBb LINE L1 -4990 1858 1021 233 368 22 30 chr5 135381731 135381962 -67703570 - L1PBb LINE L1 -5845 1004 776 332 395 47 57 chr5 135382028 135382643 -67702889 - L1PBb LINE L1 -6233 616 8 1142 160 139 64 chr5 135383040 135383321 -67702211 - LTR18B LTR ERVL 0 614 313 965 157 5 83 chr5 135383325 135383529 -67702003 - LTR18B LTR ERVL -426 188 1 38 22 0 0 chr5 135385262 135385307 -67700225 + AT_rich Low_complexity Low_complexity 1 45 0 7343 251 57 17 chr5 135385701 135388073 -67697459 + L1P LINE L1 2551 5015 -1131 28661 122 16 58 chr5 135388073 135388477 -67697055 + L1P LINE L1 3 423 -5723 234 0 0 0 chr5 135388477 135388503 -67697029 + (TTG)n Simple_repeat Simple_repeat 2 27 0 28661 122 16 58 chr5 135388503 135393319 -67692213 + L1P LINE L1 423 5000 -1146 2448 169 24 39 chr5 135393419 135393929 -67691603 + L1MA9 LINE L1 5512 6013 -299 183 240 0 20 chr5 135394119 135394169 -67691363 + L2 LINE L2 3013 3061 -252 3998 57 6 13 chr5 135394184 135394714 -67690818 + L1PA4 LINE L1 5627 6152 -3 714 114 26 33 chr5 135397409 135397682 -67687850 + AluSx SINE Alu 1 312 0 3013 93 13 0 chr5 135397750 135398148 -67687384 + MLT2A2 LTR ERVL 1 403 -50 512 40 0 53 chr5 135398179 135398254 -67687278 + MLT2A2 LTR ERVL 383 453 0 312 27 0 0 chr5 135398396 135398433 -67687099 + (TC)n Simple_repeat Simple_repeat 1 37 0 407 320 163 0 chr5 135399345 135399492 -67686040 + MER5A DNA MER1_type 8 178 -11 31 0 0 0 chr5 135399877 135399908 -67685624 + AT_rich Low_complexity Low_complexity 1 31 0 1504 82 0 0 chr5 135400111 135400307 -67685225 + L1PA8 LINE L1 5964 6159 -13 189 74 0 0 chr5 135400328 135400355 -67685177 + (A)n Simple_repeat Simple_repeat 1 27 0 767 257 99 67 chr5 135400396 135400812 -67684720 + MLT1K LTR MaLR 137 565 -23 5423 171 39 41 chr5 135400923 135401045 -67684487 - L1MC1 LINE L1 0 6333 6212 3774 113 57 0 chr5 135401045 135401622 -67683910 + MER4B LTR ERV1 1 610 0 5423 171 39 41 chr5 135401622 135402593 -67682939 - L1MC1 LINE L1 -121 6212 5245 1983 153 6 18 chr5 135402593 135402933 -67682599 + MER1B DNA MER1_type 2 337 0 5423 171 39 41 chr5 135402933 135403370 -67682162 - L1MC1 LINE L1 -1088 5245 4809 799 64 82 0 chr5 135403454 135403564 -67681968 + LTR17 LTR ERV1 104 222 -558 2146 156 20 3 chr5 135403565 135403912 -67681620 - MER4E LTR ERV1 -370 409 57 4336 87 0 17 chr5 135403939 135404525 -67681007 + LTR17 LTR ERV1 205 780 0 240 260 130 0 chr5 135404606 135404706 -67680826 - L1P LINE L1 -1131 5015 4903 392 308 38 88 chr5 135404736 135405132 -67680400 - L1M4 LINE L1 -1273 4873 4498 248 287 52 26 chr5 135405248 135405363 -67680169 - L1M4 LINE L1 -2301 3845 3728 242 125 21 0 chr5 135405363 135405411 -67680121 + GA-rich Low_complexity Low_complexity 2 50 0 282 324 9 30 chr5 135406033 135406257 -67679275 + CT-rich Low_complexity Low_complexity 1 219 0 33 66 0 0 chr5 135407672 135407733 -67677799 + AT_rich Low_complexity Low_complexity 1 61 0 343 339 55 48 chr5 135407855 135407896 -67677636 - MIR3 SINE MIR -10 198 159 592 226 128 0 chr5 135407896 135408060 -67677472 - MER5A DNA MER1_type 0 189 5 343 339 55 48 chr5 135408060 135408183 -67677349 - MIR3 SINE MIR -49 159 33 379 259 161 43 chr5 135408205 135408367 -67677165 - MER5A DNA MER1_type 0 189 9 5789 143 25 48 chr5 135408451 135409642 -67675890 - L1MC1 LINE L1 0 6333 5171 266 319 159 62 chr5 135409852 135410128 -67675404 - L2 LINE L2 0 3272 2970 14237 196 34 20 chr5 135410195 135416671 -67668861 + L1PB1 LINE L1 6 6809 -58 211 206 0 0 chr5 135417106 135417140 -67668392 + L2 LINE L2 3149 3182 -90 2796 241 50 7 chr5 135417857 135418752 -67666780 + L1M4 LINE L1 3119 4052 -2094 7601 30 9 6 chr5 135418780 135420080 -67665452 - L1PA4 LINE L1 -1 6154 4853 2193 109 20 0 chr5 135470960 135471263 -67614269 + AluY SINE Alu 1 309 -2 550 301 14 38 chr5 135472185 135472398 -67613134 - MARNA DNA Mariner -370 216 9 369 109 0 0 chr5 135472698 135472753 -67612779 + (CA)n Simple_repeat Simple_repeat 2 56 0 318 283 26 26 chr5 135473878 135473991 -67611541 - MIR SINE MIR -73 189 77 195 239 159 53 chr5 135474187 135474300 -67611232 - MIR SINE MIR -66 142 18 36884 33 17 1 chr5 135474912 135480931 -67604601 + L1PA2 LINE L1 5 6150 -5 300 120 0 0 chr5 135480938 135480988 -67604544 + (TC)n Simple_repeat Simple_repeat 1 50 0 370 333 201 37 chr5 135481156 135481559 -67603973 + L3 LINE CR1 1071 1539 -38 944 197 22 0 chr5 135482310 135482493 -67603039 - MER5A DNA MER1_type -1 188 2 23 0 0 0 chr5 135482704 135482727 -67602805 + AT_rich Low_complexity Low_complexity 1 23 0 291 300 0 0 chr5 135485845 135485925 -67599607 + GA-rich Low_complexity Low_complexity 2 81 0 675 211 66 0 chr5 135486279 135486431 -67599101 - MER63A DNA MER1_type 0 210 49 391 260 201 39 chr5 135486831 135487035 -67598497 - MIR SINE MIR -13 249 13 265 273 26 13 chr5 135487296 135487373 -67598159 + L3 LINE CR1 1404 1481 -96 1655 198 27 3 chr5 135487379 135487672 -67597860 - AluJo SINE Alu -12 300 1 45 34 0 0 chr5 135488327 135488386 -67597146 + AT_rich Low_complexity Low_complexity 1 59 0 1020 119 23 0 chr5 135488491 135488667 -67596865 - L1MA4 LINE L1 -4 6296 6117 255 330 140 0 chr5 135488676 135488776 -67596756 - MIR3 SINE MIR -54 154 41 240 233 0 0 chr5 135490762 135490835 -67594697 + (TA)n Simple_repeat Simple_repeat 1 73 0 237 355 126 51 chr5 135491568 135492118 -67593414 + L2 LINE L2 2387 2977 -337 1098 235 125 35 chr5 135492186 135492666 -67592866 + LTR33A LTR ERVL 1 523 0 273 254 279 8 chr5 135492841 135492963 -67592569 + L2 LINE L2 3117 3271 -1 2210 128 0 0 chr5 135493003 135493307 -67592225 - AluSx SINE Alu -8 304 1 365 263 20 10 chr5 135493821 135493920 -67591612 - MIR SINE MIR -68 140 41 35 71 0 0 chr5 135493935 135494005 -67591527 + AT_rich Low_complexity Low_complexity 1 70 0 1794 75 20 4 chr5 135494275 135494527 -67591005 - MER41A LTR ERV1 -8 546 291 395 71 0 0 chr5 135494526 135494582 -67590950 - MER41A LTR ERV1 -478 76 21 * 1443 153 25 64 chr5 135494582 135494863 -67590669 + AluJo SINE Alu 13 282 -30 369 0 0 0 chr5 135494866 135494907 -67590625 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2164 129 3 0 chr5 135495401 135495703 -67589829 + AluSp SINE Alu 1 303 -10 479 252 74 7 chr5 135496441 135496576 -67588956 + MIR SINE MIR 119 262 0 278 281 180 0 chr5 135497996 135498124 -67587408 - MIR SINE MIR -13 249 99 1976 143 0 3 chr5 135499031 135499370 -67586162 + AluSx SINE Alu 1 312 0 1394 25 0 0 chr5 135500335 135500494 -67585038 + L1PA5 LINE L1 5980 6138 -16 387 0 0 0 chr5 135500513 135500556 -67584976 + (CA)n Simple_repeat Simple_repeat 2 44 0 231 36 0 0 chr5 135500674 135500702 -67584830 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 699 285 115 58 chr5 135500708 135500805 -67584727 - L2 LINE L2 -18 3295 3205 1086 174 40 0 chr5 135500805 135501006 -67584526 + MER3 DNA MER1_type 1 209 0 699 285 115 58 chr5 135501006 135501182 -67584350 - L2 LINE L2 -108 3205 3040 2209 93 0 4 chr5 135501182 135501486 -67584046 + AluSc SINE Alu 1 303 0 699 285 115 58 chr5 135501486 135502029 -67583503 - L2 LINE L2 -273 3040 2448 24 0 0 0 chr5 135502244 135502268 -67583264 + AT_rich Low_complexity Low_complexity 1 24 0 1604 154 34 83 chr5 135502300 135502624 -67582908 + AluJo SINE Alu 1 308 -4 238 245 0 0 chr5 135504524 135504577 -67580955 - MER102b DNA MER1_type -1 340 288 244 371 60 0 chr5 135504596 135504712 -67580820 + L2 LINE L2 3150 3272 0 2509 91 28 25 chr5 135504874 135505236 -67580296 - THE1B LTR MaLR -1 363 1 563 223 37 48 chr5 135505373 135505561 -67579971 - L1ME3A LINE L1 -146 6024 5839 687 176 8 8 chr5 135505862 135505987 -67579545 - FLAM_C SINE Alu -18 125 1 402 21 0 0 chr5 135507146 135507193 -67578339 + (T)n Simple_repeat Simple_repeat 1 47 0 2336 128 0 0 chr5 135507387 135507699 -67577833 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 135508555 135508583 -67576949 + AT_rich Low_complexity Low_complexity 1 28 0 605 218 0 94 chr5 135509574 135509744 -67575788 - MER5B DNA MER1_type -24 154 1 1034 246 45 24 chr5 135511517 135511847 -67573685 - MER102b DNA MER1_type -4 337 1 365 320 64 0 chr5 135515118 135515243 -67570289 + L3 LINE CR1 1437 1569 -8 282 95 0 0 chr5 135515893 135515935 -67569597 + (TC)n Simple_repeat Simple_repeat 2 43 0 356 210 290 65 chr5 135516138 135516338 -67569194 + MIR SINE MIR 18 262 0 720 245 231 0 chr5 135516772 135516984 -67568548 - MIR SINE MIR 0 262 2 1051 171 36 54 chr5 135517011 135517233 -67568299 + MER20 DNA MER1_type 1 218 -1 429 312 12 35 chr5 135518306 135518476 -67567056 - MIR SINE MIR -33 229 64 228 319 0 14 chr5 135518639 135518708 -67566824 + MIR SINE MIR 76 143 -119 210 283 0 0 chr5 135518735 135518827 -67566705 + (CATA)n Simple_repeat Simple_repeat 3 94 0 208 265 0 20 chr5 135519792 135519841 -67565691 - MIR SINE MIR -130 78 31 184 342 132 0 chr5 135520066 135520142 -67565390 - L2 LINE L2 -4 3268 3183 650 296 79 21 chr5 135520478 135520718 -67564814 - MIR SINE MIR -1 261 8 196 325 119 53 chr5 135521132 135521880 -67563652 - L2 LINE L2 -1044 2270 1474 470 288 7 36 chr5 135522786 135522925 -67562607 - MIR SINE MIR -108 154 20 27 49 0 0 chr5 135522961 135523002 -67562530 + AT_rich Low_complexity Low_complexity 1 41 0 1068 197 6 0 chr5 135523298 135523481 -67562051 - MER5A DNA MER1_type 0 189 6 266 316 79 7 chr5 135523499 135523638 -67561894 - L2 LINE L2 -208 3064 2916 23 0 0 0 chr5 135526466 135526489 -67559043 + AT_rich Low_complexity Low_complexity 1 23 0 224 298 93 50 chr5 135528614 135528807 -67556725 + MIR SINE MIR 2 207 -55 966 235 27 27 chr5 135528870 135529130 -67556402 - MIR SINE MIR 0 262 3 2573 140 31 5 chr5 135529945 135530360 -67555172 + MSTA LTR MaLR 1 426 -2 792 286 194 19 chr5 135530500 135530927 -67554605 - L2 LINE L2 0 3313 2812 324 217 58 50 chr5 135531107 135531227 -67554305 + L1MC4 LINE L1 7922 8042 0 705 282 155 19 chr5 135531282 135531701 -67553831 - L3 LINE CR1 -47 1530 1055 518 292 36 0 chr5 135532295 135532486 -67553046 - MIR SINE MIR -32 230 32 24 67 0 0 chr5 135533606 135533651 -67551881 + AT_rich Low_complexity Low_complexity 1 45 0 2081 147 7 0 chr5 135534037 135534344 -67551188 + AluSx SINE Alu 1 309 -3 358 167 326 53 chr5 135535211 135535343 -67550189 + MER5A DNA MER1_type 22 189 0 317 275 115 64 chr5 135535381 135535599 -67549933 + L2 LINE L2 2684 2912 -402 769 297 158 34 chr5 135535668 135536428 -67549104 + L2 LINE L2 1687 2540 -774 970 204 5 5 chr5 135536431 135536622 -67548910 + MLT1A1 LTR MaLR 1 191 -174 422 304 199 61 chr5 135536624 135537146 -67548386 + L2 LINE L2 2724 3312 -1 183 80 0 0 chr5 135537234 135537259 -67548273 + (A)n Simple_repeat Simple_repeat 1 25 0 1568 217 7 3 chr5 135537405 135537705 -67547827 - AluJo SINE Alu -11 301 1 2265 110 10 0 chr5 135537726 135538026 -67547506 - AluSx SINE Alu -9 303 1 421 221 0 0 chr5 135540862 135540948 -67544584 - MIR3 SINE MIR -4 204 119 431 108 43 0 chr5 135541137 135541230 -67544302 + CT-rich Low_complexity Low_complexity 1 97 0 916 253 94 26 chr5 135541840 135542299 -67543233 + MER113 DNA MER1_type? 32 521 0 293 264 47 38 chr5 135543035 135543141 -67542391 - L2 LINE L2 -7 3306 3200 23 0 0 0 chr5 135544072 135544095 -67541437 + AT_rich Low_complexity Low_complexity 1 23 0 180 218 0 91 chr5 135544515 135544570 -67540962 - L2 LINE L2 -4 3268 3219 255 279 0 0 chr5 135548497 135548565 -67536967 - L2 LINE L2 -86 3186 3119 26 0 0 0 chr5 135549838 135549864 -67535668 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 135550107 135550130 -67535402 + AT_rich Low_complexity Low_complexity 1 23 0 277 266 43 53 chr5 135550360 135550454 -67535078 - L2 LINE L2 -40 3273 3181 567 219 115 50 chr5 135551639 135551899 -67533633 - MER113 DNA MER1_type? -108 413 137 1884 184 32 104 chr5 135551943 135552095 -67533437 + L1M4 LINE L1 2630 2791 -3355 2672 64 3 0 chr5 135552095 135552437 -67533095 - L1PA6 LINE L1 -2 6152 5810 1884 184 32 104 chr5 135552437 135553007 -67532525 + L1M4 LINE L1 2791 3300 -2846 614 250 77 41 chr5 135553904 135554100 -67531432 - MIR SINE MIR -56 206 4 21 67 0 40 chr5 135554395 135554470 -67531062 + AT_rich Low_complexity Low_complexity 1 72 0 1564 239 72 17 chr5 135554597 135555234 -67530298 + L1ME1 LINE L1 5479 6331 -3 278 301 167 20 chr5 135555669 135556065 -67529467 + L1ME4a LINE L1 5654 6107 -14 324 0 0 0 chr5 135556612 135556648 -67528884 + (TG)n Simple_repeat Simple_repeat 2 37 0 644 272 31 36 chr5 135556692 135556916 -67528616 - MIR SINE MIR -11 251 29 1266 185 26 0 chr5 135557258 135557490 -67528042 + Tigger5 DNA MER2_type 1 238 -2085 582 112 0 11 chr5 135557478 135557567 -67527965 + Tigger5 DNA MER2_type 2235 2322 -1 * 185 346 25 12 chr5 135559596 135559677 -67525855 + MIR SINE MIR 1 82 -180 28 0 0 0 chr5 135559688 135559716 -67525816 + AT_rich Low_complexity Low_complexity 1 28 0 490 224 142 0 chr5 135559738 135559872 -67525660 + MIR SINE MIR 109 261 -1 282 271 23 28 chr5 135559990 135560167 -67525365 + MER104 DNA Tc2 4 179 -1 3211 164 48 5 chr5 135561640 135562220 -67523312 + MER6A DNA MER2_type 1 605 0 272 247 34 34 chr5 135562237 135562326 -67523206 + MIR3 SINE MIR 119 207 -1 473 320 15 60 chr5 135563733 135563933 -67521599 + MIR3 SINE MIR 3 193 -15 198 0 0 0 chr5 135565612 135565634 -67519898 + (T)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr5 135566893 135566914 -67518618 + AT_rich Low_complexity Low_complexity 1 21 0 274 383 166 23 chr5 135568520 135568959 -67516573 + L3 LINE CR1 46 547 -1030 186 276 126 0 chr5 135569055 135569142 -67516390 + L3 LINE CR1 743 840 -737 261 0 0 0 chr5 135569144 135569173 -67516359 + (CA)n Simple_repeat Simple_repeat 2 30 0 247 26 0 0 chr5 135569192 135569230 -67516302 + L1PA6 LINE L1 6117 6154 0 359 347 23 0 chr5 135569640 135569813 -67515719 - L1MC/D LINE L1 -2106 5702 5526 1998 181 40 2 chr5 135570456 135570853 -67514679 + MLT1C LTR MaLR 56 467 0 1003 221 19 0 chr5 135571194 135571402 -67514130 + MER58A DNA MER1_type 4 215 -9 506 101 45 11 chr5 135571763 135571852 -67513680 - MLT1E2 LTR MaLR 0 626 535 620 217 8 0 chr5 135571853 135571973 -67513559 + FLAM_A SINE Alu 1 121 -12 27 0 0 0 chr5 135571973 135572000 -67513532 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 135572048 135572069 -67513463 + AT_rich Low_complexity Low_complexity 1 21 0 676 69 69 0 chr5 135572081 135572240 -67513292 + (TA)n Simple_repeat Simple_repeat 1 170 0 1813 86 0 0 chr5 135572291 135572525 -67513007 + AluY SINE Alu 59 292 -19 2052 159 22 0 chr5 135572533 135572891 -67512641 - MER47A DNA MER2_type 0 366 1 460 266 179 43 chr5 135572954 135573255 -67512277 - L1ME4a LINE L1 -208 5913 5572 287 278 42 113 chr5 135573575 135573787 -67511745 + MIR SINE MIR 10 206 -56 2134 123 3 3 chr5 135577257 135577557 -67507975 - AluSx SINE Alu -12 300 1 217 0 0 0 chr5 135580493 135580517 -67505015 + (TTTTG)n Simple_repeat Simple_repeat 2 145 0 2077 140 0 3 chr5 135580517 135580801 -67504731 - AluSx SINE Alu -27 285 1 222 91 0 0 chr5 135581095 135581128 -67504404 + (TC)n Simple_repeat Simple_repeat 1 33 0 232 329 0 14 chr5 135582375 135582445 -67503087 + L2 LINE L2 3190 3258 -14 297 279 76 29 chr5 135583349 135583521 -67502011 - HAL1 LINE L1 -85 2422 2243 326 316 0 0 chr5 135583524 135583622 -67501910 - MIR SINE MIR -10 252 155 881 194 0 12 chr5 135583622 135583787 -67501745 - FRAM SINE Alu -16 160 1 603 235 34 54 chr5 135583787 135583936 -67501596 - MIR SINE MIR -100 162 17 202 194 0 0 chr5 135583994 135584030 -67501502 + CT-rich Low_complexity Low_complexity 1 36 0 2716 245 103 29 chr5 135584033 135585166 -67500366 - HAL1 LINE L1 -264 2243 1027 2173 117 33 0 chr5 135585168 135585467 -67500065 - AluSx SINE Alu -3 309 1 330 256 125 31 chr5 135585500 135585660 -67499872 - L1MC4a LINE L1 -1830 5978 5804 522 271 108 61 chr5 135585663 135585958 -67499574 - HAL1 LINE L1 -2195 312 4 21 0 0 0 chr5 135586625 135586646 -67498886 + AT_rich Low_complexity Low_complexity 1 21 0 241 322 34 34 chr5 135588305 135588423 -67497109 - MIR SINE MIR -90 172 55 24 0 0 0 chr5 135590036 135590060 -67495472 + AT_rich Low_complexity Low_complexity 1 24 0 236 197 0 16 chr5 135590482 135590543 -67494989 + CT-rich Low_complexity Low_complexity 3 62 0 481 209 47 8 chr5 135590937 135591066 -67494466 + MER5B DNA MER1_type 1 134 -44 302 167 0 15 chr5 135591066 135591132 -67494400 + GA-rich Low_complexity Low_complexity 2 66 0 690 159 32 8 chr5 135591162 135591288 -67494244 - L1MA5A LINE L1 -7 6290 6162 255 192 51 51 chr5 135591319 135591397 -67494135 + MER5A DNA MER1_type 9 86 -103 519 288 161 29 chr5 135592277 135592725 -67492807 + MLT1J LTR MaLR 1 507 -4 856 264 10 6 chr5 135592887 135593288 -67492244 + LTR16A LTR ERVL 18 448 -2 465 99 127 0 chr5 135594245 135594316 -67491216 + MADE1 DNA Mariner 1 80 0 779 252 93 19 chr5 135594976 135595286 -67490246 + LTR16B LTR ERVL 131 463 -1 3287 48 0 7 chr5 135597724 135598139 -67487393 - LTR7 LTR ERV1 -38 412 1 2349 95 50 16 chr5 135598139 135598518 -67487014 - HERVH LTR ERV1 0 7713 7322 1142 117 96 0 chr5 135598516 135598704 -67486828 - HERVH LTR ERV1 -1894 5819 5614 * 2549 170 0 2 chr5 135598739 135599150 -67486382 - HERVH LTR ERV1 -2564 5149 4740 960 162 0 7 chr5 135599149 135599303 -67486229 - HERVH LTR ERV1 -4069 3644 3492 * 878 125 46 13 chr5 135599293 135599445 -67486087 - HERVH LTR ERV1 -4423 3290 3134 * 16308 95 14 17 chr5 135599416 135602229 -67483303 - HERVH LTR ERV1 -4718 2995 1 836 62 0 18 chr5 135602231 135602344 -67483188 - LTR7 LTR ERV1 -2 448 338 769 335 45 3 chr5 135604098 135604408 -67481124 - MER102b DNA MER1_type -2 339 17 21 0 0 0 chr5 135604455 135604476 -67481056 + AT_rich Low_complexity Low_complexity 1 21 0 550 226 120 24 chr5 135604671 135604963 -67480569 + L1ME4a LINE L1 5611 5930 -191 5454 217 121 32 chr5 135604989 135605186 -67480346 + L1ME1 LINE L1 2890 3068 -3078 2178 112 10 3 chr5 135605186 135605482 -67480050 + AluY SINE Alu 1 298 -13 5454 217 121 32 chr5 135605482 135606944 -67478588 + L1ME1 LINE L1 3068 4738 -1408 2574 51 0 19 chr5 135606944 135607260 -67478272 - AluY SINE Alu -1 310 1 5454 217 121 32 chr5 135607260 135607477 -67478055 + L1ME1 LINE L1 4738 4934 -1212 1526 173 57 70 chr5 135607487 135607610 -67477922 + MLT2D LTR ERVL 3 126 -288 6665 95 2 0 chr5 135607610 135608844 -67476688 - L1PA13 LINE L1 -5 6158 4915 1526 173 57 70 chr5 135608844 135609089 -67476443 + MLT2D LTR ERVL 126 366 -48 1079 237 49 19 chr5 135609103 135609428 -67476104 + L1ME1 LINE L1 5827 6161 -5 307 209 27 109 chr5 135609599 135609663 -67475869 - MER5B DNA MER1_type 0 178 125 2625 49 0 0 chr5 135609663 135609971 -67475561 + AluY SINE Alu 1 308 -3 307 209 27 109 chr5 135609971 135610016 -67475516 - MER5B DNA MER1_type -53 125 78 1896 140 48 0 chr5 135610018 135610310 -67475222 - AluSx SINE Alu -6 306 1 1028 318 59 10 chr5 135611937 135612346 -67473186 - L2 LINE L2 -81 3232 2804 2007 119 0 25 chr5 135613135 135613420 -67472112 + AluSx SINE Alu 14 291 -21 23 0 0 0 chr5 135613423 135613446 -67472086 + AT_rich Low_complexity Low_complexity 1 23 0 321 180 20 20 chr5 135614560 135614660 -67470872 + CT-rich Low_complexity Low_complexity 2 101 0 185 263 25 25 chr5 135614662 135614742 -67470790 - MIR SINE MIR -8 254 175 279 133 0 0 chr5 135615044 135615089 -67470443 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 2120 103 0 21 chr5 135615165 135615478 -67470054 - AluSx SINE Alu 0 307 1 185 309 151 29 chr5 135616104 135616243 -67469289 + L2 LINE L2 3158 3313 0 188 341 61 0 chr5 135616306 135616388 -67469144 + L2 LINE L2 3136 3222 -50 570 186 0 0 chr5 135616395 135616481 -67469051 + AluJ/FLAM SINE Alu 2 87 -225 293 193 45 45 chr5 135616606 135616694 -67468838 + L1ME1 LINE L1 6071 6158 -8 2041 106 46 3 chr5 135616730 135617014 -67468518 + AluSg SINE Alu 1 296 -14 2061 138 0 3 chr5 135617608 135617939 -67467593 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 135618107 135618129 -67467403 + (TG)n Simple_repeat Simple_repeat 1 22 0 520 262 71 48 chr5 135618130 135618340 -67467192 + Charlie8 DNA MER1_type 40 254 -2163 806 204 37 90 chr5 135620755 135621000 -67464532 - MIR SINE MIR 0 262 31 922 204 11 6 chr5 135621790 135621966 -67463566 + MER5B DNA MER1_type 1 177 -1 531 346 18 14 chr5 135622109 135622326 -67463206 - MIR SINE MIR -16 246 29 518 262 78 19 chr5 135622626 135622832 -67462700 - MIR SINE MIR -22 240 23 248 211 13 0 chr5 135623123 135623199 -67462333 + CT-rich Low_complexity Low_complexity 2 78 0 1944 109 0 64 chr5 135623711 135624023 -67461509 + L1PA11 LINE L1 5883 6174 0 2094 129 7 0 chr5 135624035 135624329 -67461203 + AluSx SINE Alu 1 296 -16 28 29 0 0 chr5 135626244 135626279 -67459253 + AT_rich Low_complexity Low_complexity 1 35 0 592 194 8 8 chr5 135626313 135626437 -67459095 - MIR SINE MIR -69 193 70 202 315 81 41 chr5 135626527 135626734 -67458798 - MIR SINE MIR -46 216 9 186 133 0 0 chr5 135627227 135627257 -67458275 + (T)n Simple_repeat Simple_repeat 1 30 0 387 350 92 12 chr5 135627646 135627809 -67457723 - L2 LINE L2 0 3272 3097 195 274 123 14 chr5 135628569 135628642 -67456890 + L2 LINE L2 3154 3234 -38 589 180 36 9 chr5 135628939 135629050 -67456482 - MLT1F1 LTR MaLR 0 567 454 1167 269 75 56 chr5 135629738 135630259 -67455273 + L2 LINE L2 2782 3313 0 505 283 87 36 chr5 135630258 135630477 -67455055 - MIR SINE MIR -18 244 15 * 291 254 0 0 chr5 135631027 135631098 -67454434 - MIR SINE MIR -14 248 178 2227 112 0 3 chr5 135631318 135631622 -67453910 + AluSq SINE Alu 1 303 -10 26 0 0 0 chr5 135631648 135631674 -67453858 + AT_rich Low_complexity Low_complexity 1 26 0 * 42206 33 23 8 chr5 135631671 135637731 -67447801 - L1PA2 LINE L1 0 6155 1 180 255 21 21 chr5 135638522 135638569 -67446963 + MIR SINE MIR 21 67 -141 539 234 103 34 chr5 135638724 135638899 -67446633 + MIR SINE MIR 50 236 -26 553 282 12 18 chr5 135638915 135639078 -67446454 - MIR SINE MIR -60 202 41 1792 165 0 66 chr5 135639102 135639498 -67446034 - L1MA7 LINE L1 -159 6015 5769 359 302 128 24 chr5 135639972 135640206 -67445326 - MIR SINE MIR -1 261 8 468 306 80 106 chr5 135640840 135641020 -67444512 + L2 LINE L2 2148 2331 -941 1609 281 26 48 chr5 135641020 135641628 -67443904 - MLT1G1 LTR MaLR 0 595 1 468 306 80 106 chr5 135641628 135641913 -67443619 + L2 LINE L2 2331 2622 -650 1637 158 141 23 chr5 135641913 135642267 -67443265 - MSTD LTR MaLR 0 396 1 468 306 80 106 chr5 135642267 135642718 -67442814 + L2 LINE L2 2622 3048 -224 219 284 90 0 chr5 135642918 135642985 -67442547 + L2 LINE L2 3200 3272 0 335 258 48 8 chr5 135643998 135644122 -67441410 - L1ME4a LINE L1 -16 6105 5977 201 94 0 0 chr5 135644145 135644177 -67441355 + (TG)n Simple_repeat Simple_repeat 1 32 0 2258 119 3 3 chr5 135644236 135644547 -67440985 - AluSx SINE Alu -1 311 1 32 0 0 0 chr5 135644588 135644620 -67440912 + AT_rich Low_complexity Low_complexity 1 32 0 1670 189 3 7 chr5 135644686 135644987 -67440545 - AluJb SINE Alu -12 300 1 1104 230 118 67 chr5 135645872 135646263 -67439269 + MER77 LTR ERV1 189 599 -6 2061 191 99 9 chr5 135646459 135646893 -67438639 - MLT1D LTR MaLR -32 473 1 333 258 11 0 chr5 135647039 135647128 -67438404 + MIR SINE MIR 166 255 -7 330 115 0 0 chr5 135647128 135647180 -67438352 + (TTA)n Simple_repeat Simple_repeat 3 54 0 1336 231 31 3 chr5 135649624 135649918 -67435614 + LTR40c LTR ERVL 56 357 -108 24 67 0 0 chr5 135650546 135650591 -67434941 + AT_rich Low_complexity Low_complexity 1 45 0 292 204 30 83 chr5 135650686 135650739 -67434793 - L1ME LINE L1 -366 5755 5701 754 241 137 83 chr5 135650739 135650761 -67434771 - MLT1J1 LTR MaLR 0 446 427 1720 184 10 16 chr5 135650761 135651066 -67434466 + AluJb SINE Alu 1 303 -9 754 241 137 83 chr5 135651066 135651466 -67434066 - MLT1J1 LTR MaLR -19 427 1 292 204 30 83 chr5 135651466 135651544 -67433988 - L1ME LINE L1 -420 5701 5631 21 36 0 0 chr5 135651545 135651573 -67433959 + AT_rich Low_complexity Low_complexity 1 28 0 330 26 0 0 chr5 135651761 135651800 -67433732 + (TG)n Simple_repeat Simple_repeat 2 40 0 260 292 94 0 chr5 135654564 135654660 -67430872 - MER110 LTR ERV1 0 491 387 1544 161 7 22 chr5 135654674 135654947 -67430585 - AluJo SINE Alu -23 289 21 2273 156 43 51 chr5 135654960 135655427 -67430105 - L1MB5 LINE L1 -1 6173 5711 1542 188 86 8 chr5 135655437 135655798 -67429734 - MER110A LTR ERV1 -79 389 1 3663 152 8 53 chr5 135656827 135657602 -67427930 - L1MB3 LINE L1 0 6183 5444 457 319 25 0 chr5 135657991 135658148 -67427384 + MIR3 SINE MIR 32 192 -16 199 322 172 0 chr5 135658819 135658906 -67426626 + MIR SINE MIR 28 129 -133 229 298 0 0 chr5 135658937 135658994 -67426538 + L2 LINE L2 3257 3313 0 2095 110 7 10 chr5 135660667 135660967 -67424565 + AluSq SINE Alu 1 299 -14 22 35 0 0 chr5 135661741 135661770 -67423762 + AT_rich Low_complexity Low_complexity 1 29 0 406 213 52 189 chr5 135661931 135662180 -67423352 + MER102a DNA MER1_type 116 330 0 651 316 34 46 chr5 135664640 135664825 -67420707 + MIR SINE MIR 21 204 -58 4153 82 4 0 chr5 135664825 135665375 -67420157 + MER41A LTR ERV1 3 554 0 651 316 34 46 chr5 135665375 135665426 -67420106 + MIR SINE MIR 204 254 -8 249 303 111 10 chr5 135665854 135665953 -67419579 + L2 LINE L2 3129 3237 -35 2009 110 12 61 chr5 135666678 135667001 -67418531 + AluSx SINE Alu 1 308 0 279 0 0 0 chr5 135667001 135667032 -67418500 + (TA)n Simple_repeat Simple_repeat 1 31 0 357 43 0 0 chr5 135668514 135668561 -67416971 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr5 135668575 135668604 -67416928 + AT_rich Low_complexity Low_complexity 1 29 0 294 106 0 0 chr5 135669238 135669285 -67416247 + (CA)n Simple_repeat Simple_repeat 2 48 0 243 356 20 48 chr5 135669353 135669499 -67416033 - L2 LINE L2 -508 2806 2665 1884 141 13 13 chr5 135670215 135670514 -67415018 + AluSx SINE Alu 1 299 -13 316 349 71 49 chr5 135670575 135671028 -67414504 - L2 LINE L2 -1317 1997 1535 31 0 0 0 chr5 135671053 135671084 -67414448 + AT_rich Low_complexity Low_complexity 1 31 0 3604 140 33 30 chr5 135671708 135672585 -67412947 + L1MB1 LINE L1 5100 6141 -27 232 151 0 38 chr5 135672585 135672638 -67412894 + A-rich Low_complexity Low_complexity 3 53 0 244 108 0 0 chr5 135672638 135672675 -67412857 + L1MB1 LINE L1 6126 6162 -6 394 213 16 25 chr5 135672681 135672803 -67412729 + L1M4 LINE L1 2915 3035 -3111 1424 114 16 39 chr5 135673132 135673387 -67412145 + L1MA8 LINE L1 5862 6110 -181 1127 134 0 0 chr5 135673390 135673547 -67411985 + AluSg/x SINE Alu 142 298 -14 637 142 219 7 chr5 135673548 135673703 -67411829 + L1MA8 LINE L1 6103 6290 -1 498 26 26 26 chr5 135673825 135673902 -67411630 + (GAAA)n Simple_repeat Simple_repeat 4 80 0 29 0 0 0 chr5 135674102 135674131 -67411401 + AT_rich Low_complexity Low_complexity 1 29 0 2324 183 54 21 chr5 135674145 135674626 -67410906 + MLT1D LTR MaLR 1 497 -8 21 36 0 0 chr5 135675309 135675337 -67410195 + AT_rich Low_complexity Low_complexity 1 28 0 15319 117 23 19 chr5 135675350 135675588 -67409944 + Tigger1 DNA MER2_type 1 237 -2181 2310 110 0 0 chr5 135675588 135675888 -67409644 - AluSx SINE Alu -12 300 1 15319 117 23 19 chr5 135675888 135678059 -67407473 + Tigger1 DNA MER2_type 237 2418 0 959 202 0 17 chr5 135678331 135678509 -67407023 - FAM SINE Alu 0 175 1 26 30 0 0 chr5 135678802 135678835 -67406697 + AT_rich Low_complexity Low_complexity 1 33 0 341 86 17 0 chr5 135678846 135678904 -67406628 + (CA)n Simple_repeat Simple_repeat 1 59 0 1971 170 36 22 chr5 135679674 135680033 -67405499 - THE1B LTR MaLR 0 364 1 345 62 0 0 chr5 135680572 135680620 -67404912 + (CA)n Simple_repeat Simple_repeat 2 49 0 228 385 0 0 chr5 135683125 135683190 -67402342 - L2 LINE L2 0 3272 3208 521 273 15 0 chr5 135683392 135683524 -67402008 - MER94 DNA DNA 0 134 1 185 243 19 97 chr5 135684096 135684199 -67401333 + MIR SINE MIR 118 212 -50 455 221 221 57 chr5 135684860 135685191 -67400341 - MLT1J1 LTR MaLR -61 385 1 235 313 62 0 chr5 135686066 135686162 -67399370 - L2 LINE L2 -2254 1060 959 305 181 42 14 chr5 135686924 135686996 -67398536 - MER116 DNA Mariner 0 80 7 316 302 33 55 chr5 135687188 135687370 -67398162 + L2 LINE L2 1299 1476 -1838 255 305 169 0 chr5 135688184 135688302 -67397230 - MIR SINE MIR -1 261 124 1667 104 0 0 chr5 135688462 135688695 -67396837 + AluSg/x SINE Alu 69 301 0 360 239 182 50 chr5 135690000 135690159 -67395373 + MER5A DNA MER1_type 1 180 -9 200 394 126 0 chr5 135690993 135691120 -67394412 - L2 LINE L2 -5 3267 3125 398 267 205 25 chr5 135691449 135691610 -67393922 - MIR SINE MIR -54 208 19 204 40 0 0 chr5 135695221 135695246 -67390286 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 366 336 93 50 chr5 135695251 135695691 -67389841 - L2 LINE L2 -18 3295 2837 1736 160 3 20 chr5 135695930 135696224 -67389308 + AluJb SINE Alu 1 289 -23 315 0 0 0 chr5 135697120 135697155 -67388377 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 348 24 0 0 chr5 135697154 135697195 -67388337 + (TC)n Simple_repeat Simple_repeat 1 41 0 238 97 0 0 chr5 135697370 135697401 -67388131 - MER41A LTR ERV1 0 554 524 761 246 107 40 chr5 135697585 135697959 -67387573 - MLT1H LTR MaLR -3 546 148 538 350 123 43 chr5 135699400 135700104 -67385428 + L2 LINE L2 228 1035 -2279 2181 117 0 22 chr5 135700104 135700421 -67385111 - AluSx SINE Alu 0 312 3 538 350 123 43 chr5 135700421 135700710 -67384822 + L2 LINE L2 1035 1300 -2014 518 312 110 31 chr5 135700745 135701229 -67384303 - L2 LINE L2 -43 3270 2726 180 111 0 0 chr5 135701229 135701256 -67384276 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 518 312 110 31 chr5 135701256 135701298 -67384234 - L2 LINE L2 -587 2726 2689 378 0 0 0 chr5 135701735 135701777 -67383755 + (CA)n Simple_repeat Simple_repeat 2 43 0 1344 173 50 23 chr5 135702224 135702484 -67383048 - AluJb SINE Alu -25 287 21 604 303 123 41 chr5 135702548 135702914 -67382618 + L2 LINE L2 2869 3264 -8 216 0 0 0 chr5 135702963 135702987 -67382545 + (A)n Simple_repeat Simple_repeat 1 24 0 1044 270 55 32 chr5 135703660 135704008 -67381524 - LTR16B LTR ERVL -22 442 87 808 183 21 129 chr5 135704168 135704409 -67381123 + MER20 DNA MER1_type 5 219 0 210 37 0 0 chr5 135705679 135705706 -67379826 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 531 0 0 0 chr5 135755894 135755953 -67329579 + (TAATG)n Simple_repeat Simple_repeat 2 60 0 418 299 75 6 chr5 135756331 135756505 -67329027 + ERVL LTR ERVL 4504 4689 -1075 272 319 181 0 chr5 135758016 135758160 -67327372 + L2 LINE L2 2524 2693 -621 471 87 22 54 chr5 135758161 135758253 -67327279 - THE1B LTR MaLR -82 282 194 2354 116 0 0 chr5 135758273 135758584 -67326948 - AluSx SINE Alu -1 311 1 315 264 0 14 chr5 135758808 135758880 -67326652 - L2 LINE L2 -47 3266 3196 353 295 34 82 chr5 135758907 135759114 -67326418 + L1ME4a LINE L1 5566 5762 -359 1607 154 56 11 chr5 135759173 135759440 -67326092 + AluJb SINE Alu 1 279 -33 322 299 137 40 chr5 135759479 135759607 -67325925 + L1ME4a LINE L1 5795 5909 -212 1966 110 3 23 chr5 135759607 135759907 -67325625 - AluSx SINE Alu -18 294 1 322 299 137 40 chr5 135759907 135759946 -67325586 + L1ME4a LINE L1 5909 5943 -178 1680 195 10 7 chr5 135759946 135760244 -67325288 - AluJo SINE Alu -7 305 7 322 299 137 40 chr5 135760244 135760318 -67325214 + L1ME4a LINE L1 5943 6008 -113 2182 93 42 7 chr5 135760318 135760607 -67324925 - AluSp SINE Alu -13 300 2 322 299 137 40 chr5 135760607 135760641 -67324891 + L1ME4a LINE L1 6008 6099 -22 530 243 14 86 chr5 135760701 135760946 -67324586 - MIR SINE MIR -1 261 37 2416 78 0 7 chr5 135760946 135761252 -67324280 - AluY SINE Alu -7 304 1 530 243 14 86 chr5 135761252 135761286 -67324246 - MIR SINE MIR -225 37 2 193 0 0 86 chr5 135761741 135761776 -67323756 + (TTTTTG)n Simple_repeat Simple_repeat 6 37 0 905 282 79 28 chr5 135762175 135762569 -67322963 + LTR33 LTR ERVL 56 469 -52 2324 105 0 3 chr5 135762767 135763080 -67322452 + AluSx SINE Alu 1 312 0 1802 199 0 0 chr5 135763093 135763399 -67322133 + AluJb SINE Alu 1 306 -6 909 115 12 18 chr5 135763404 135763569 -67321963 + (GAAA)n Simple_repeat Simple_repeat 1 164 0 831 250 84 1 chr5 135764005 135764277 -67321255 + MLT2E LTR ERVL 1 329 -299 385 244 59 0 chr5 135764562 135764681 -67320851 - MIR SINE MIR 0 262 137 28 48 0 0 chr5 135764909 135764951 -67320581 + AT_rich Low_complexity Low_complexity 1 42 0 577 145 0 151 chr5 135765153 135765332 -67320200 - L1MB8 LINE L1 0 6178 6027 2257 85 0 0 chr5 135765484 135765800 -67319732 - AluSg SINE Alu 0 316 1 2323 104 3 0 chr5 135765805 135766112 -67319420 - AluSp SINE Alu -5 308 1 1026 141 6 6 chr5 135768498 135768675 -67316857 + MLT1B LTR MaLR 1 177 -213 1547 178 83 4 chr5 135768677 135768953 -67316579 + AluJo SINE Alu 1 298 -14 1276 103 11 0 chr5 135768956 135769155 -67316377 + AluSg/x SINE Alu 133 333 0 2349 82 0 10 chr5 135769160 135769452 -67316080 + AluSc SINE Alu 3 291 -18 2125 78 0 23 chr5 135769599 135769907 -67315625 + AluY SINE Alu 1 301 -10 621 0 0 0 chr5 135770153 135770222 -67315310 + (CATTA)n Simple_repeat Simple_repeat 2 70 0 322 391 80 23 chr5 135771244 135771594 -67313938 + L1MEd LINE L1 247 616 -5503 21 89 0 0 chr5 135772329 135772385 -67313147 + AT_rich Low_complexity Low_complexity 1 56 0 312 254 164 16 chr5 135773947 135774069 -67311463 - MIR SINE MIR -13 249 110 288 239 63 44 chr5 135774072 135774231 -67311301 + MER113 DNA MER1_type? 19 180 -341 3527 176 10 42 chr5 135774284 135774408 -67311124 + L1MB7 LINE L1 5442 5568 -616 2438 72 7 0 chr5 135774408 135774714 -67310818 + AluSp SINE Alu 1 308 -5 3527 176 10 42 chr5 135774714 135775356 -67310176 + L1MB7 LINE L1 5568 6184 0 450 240 50 0 chr5 135775647 135775747 -67309785 + MIR SINE MIR 46 150 -112 22 70 0 0 chr5 135776141 135776184 -67309348 + AT_rich Low_complexity Low_complexity 1 43 0 450 36 0 0 chr5 135777313 135777369 -67308163 + (TG)n Simple_repeat Simple_repeat 1 56 0 35 0 0 0 chr5 135777769 135777804 -67307728 + AT_rich Low_complexity Low_complexity 1 35 0 305 301 6 6 chr5 135777899 135778062 -67307470 + L1ME4a LINE L1 5265 5427 -737 7276 101 92 8 chr5 135778123 135778807 -67306725 + HSMAR2 DNA Mariner 2 627 -675 2125 99 155 16 chr5 135778807 135779181 -67306351 - MSTA LTR MaLR -2 426 1 7276 101 92 8 chr5 135779181 135779688 -67305844 + HSMAR2 DNA Mariner 627 1293 -9 772 145 0 8 chr5 135779694 135779811 -67305721 - FLAM_C SINE Alu -27 116 1 436 262 134 57 chr5 135779864 135780065 -67305467 + L1ME4a LINE L1 5515 5699 -422 231 36 0 0 chr5 135780065 135780093 -67305439 + (TG)n Simple_repeat Simple_repeat 1 28 0 436 262 134 57 chr5 135780093 135780452 -67305080 + L1ME4a LINE L1 5699 6118 -3 21 0 0 0 chr5 135780858 135780879 -67304653 + AT_rich Low_complexity Low_complexity 1 21 0 2081 157 3 9 chr5 135781300 135781644 -67303888 - MER2 DNA MER2_type 0 344 3 646 253 48 44 chr5 135782139 135782368 -67303164 + MIR SINE MIR 5 234 -28 364 309 49 24 chr5 135783692 135783815 -67301717 + MER5A DNA MER1_type 18 143 -46 203 77 58 19 chr5 135783824 135783876 -67301656 + (TA)n Simple_repeat Simple_repeat 2 55 0 391 222 102 0 chr5 135784131 135784239 -67301293 + MER103 DNA DNA 4 122 -44 2299 109 0 3 chr5 135785729 135786042 -67299490 - AluSq SINE Alu -1 312 1 215 111 0 22 chr5 135786122 135786167 -67299365 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 5896 57 6 2 chr5 135786183 135786968 -67298564 - L1PA8 LINE L1 -25 6147 5360 2489 76 0 22 chr5 135786983 135787300 -67298232 - AluY SINE Alu -1 310 1 6447 88 5 0 chr5 135787300 135787966 -67297566 - L1PA13 LINE L1 -6 6157 5496 258 95 0 0 chr5 135787966 135788008 -67297524 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2291 67 0 0 chr5 135788008 135788290 -67297242 - AluY SINE Alu -29 282 1 6447 88 5 0 chr5 135788290 135788587 -67296945 - L1PA13 LINE L1 -666 5497 5193 199 354 125 47 chr5 135789012 135789396 -67296136 - L2 LINE L2 -347 2967 2554 246 235 37 37 chr5 135789722 135789803 -67295729 - L2 LINE L2 -8 3305 3225 353 303 66 8 chr5 135790330 135790452 -67295080 - L2 LINE L2 -1 3312 3184 1578 184 41 6 chr5 135790473 135790793 -67294739 - MSTB1 LTR MaLR -98 334 4 531 277 108 17 chr5 135791209 135791440 -67294092 + MIR SINE MIR 10 261 -1 2069 142 48 13 chr5 135791461 135791835 -67293697 - L1MB7 LINE L1 -16 6168 5782 2409 130 7 12 chr5 135791846 135792261 -67293271 - L1MB7 LINE L1 -488 5696 5284 768 162 0 0 chr5 135792485 135792602 -67292930 - AluJb SINE Alu -38 274 158 279 0 0 0 chr5 135792783 135792814 -67292718 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1766 172 0 20 chr5 135793637 135793797 -67291735 - AluJb SINE Alu -21 291 138 2058 129 3 3 chr5 135793797 135794108 -67291424 - AluSx SINE Alu -1 311 1 1766 172 0 20 chr5 135794108 135794244 -67291288 - AluJb SINE Alu -174 138 1 305 114 0 0 chr5 135794309 135794353 -67291179 - U6 snRNA snRNA -62 45 2 1346 139 27 9 chr5 135794418 135794641 -67290891 - AluJb SINE Alu 0 312 86 328 274 97 52 chr5 135794691 135794939 -67290593 + L1M4 LINE L1 4094 4352 -1794 1315 141 0 15 chr5 135795059 135795258 -67290274 + AluSc SINE Alu 2 197 -112 601 203 21 0 chr5 135795258 135795401 -67290131 + L1M4 LINE L1 2763 2908 -3238 806 244 5 21 chr5 135795401 135795594 -67289938 + AluJb SINE Alu 86 275 -37 360 0 0 0 chr5 135795599 135795639 -67289893 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 426 204 15 45 chr5 135795639 135795771 -67289761 + L1M4 LINE L1 2899 3026 -3120 282 271 38 75 chr5 135795813 135795868 -67289664 + L1M4 LINE L1 2317 2373 -3773 2037 141 0 0 chr5 135795868 135796159 -67289373 - AluSx SINE Alu -21 291 1 282 271 38 75 chr5 135796159 135796369 -67289163 + L1M4 LINE L1 2373 2572 -3574 534 278 61 14 chr5 135796377 135796723 -67288809 + L1M4 LINE L1 3104 3465 -2681 971 152 56 10 chr5 135796723 135796920 -67288612 + MSTD LTR MaLR 1 206 -190 362 208 17 133 chr5 135796961 135797134 -67288398 + MSTD LTR MaLR 194 346 -50 393 297 67 44 chr5 135797595 135797818 -67287714 + MIR SINE MIR 1 222 -40 337 306 137 32 chr5 135798194 135798413 -67287119 - MIR SINE MIR -13 249 8 318 333 52 0 chr5 135798582 135798717 -67286815 + L3b LINE CR1 1340 1481 -102 431 18 18 0 chr5 135799008 135799064 -67286468 + (CA)n Simple_repeat Simple_repeat 1 57 0 2462 113 26 8 chr5 135799408 135799796 -67285736 + L1PA11 LINE L1 5780 6174 0 285 29 0 0 chr5 135800520 135800554 -67284978 + (CA)n Simple_repeat Simple_repeat 2 35 0 11967 36 5 6 chr5 135801077 135803285 -67282247 + L1PA5 LINE L1 3942 6148 -6 231 123 0 53 chr5 135803288 135803345 -67282187 + (TAAAAA)n Simple_repeat Simple_repeat 6 59 0 440 351 8 8 chr5 135803494 135803625 -67281907 + MIR3 SINE MIR 15 145 -63 257 289 33 0 chr5 135803683 135803773 -67281759 + L2 LINE L2 291 383 -2931 22 0 0 0 chr5 135803799 135803821 -67281711 + AT_rich Low_complexity Low_complexity 1 22 0 517 69 0 0 chr5 135804012 135804084 -67281448 + MER41A LTR ERV1 396 467 -87 3231 129 18 23 chr5 135804100 135804698 -67280834 + L1 LINE L1 4071 4665 -1481 194 342 0 13 chr5 135804752 135804828 -67280704 + L2 LINE L2 2326 2400 -914 1587 209 22 19 chr5 135804828 135805139 -67280393 - AluJo SINE Alu 0 312 1 24 0 0 0 chr5 135805149 135805173 -67280359 + AT_rich Low_complexity Low_complexity 1 24 0 464 401 99 0 chr5 135805180 135805464 -67280068 + L2 LINE L2 2941 3252 -20 2358 92 3 0 chr5 135805589 135805883 -67279649 + AluSp SINE Alu 1 295 -18 2227 108 7 3 chr5 135806033 135806340 -67279192 + AluSx SINE Alu 1 308 -4 250 277 89 62 chr5 135807624 135807736 -67277796 + MER5A DNA MER1_type 61 175 -14 218 184 0 0 chr5 135808777 135808815 -67276717 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 287 104 35 chr5 135808858 135808973 -67276559 + MIR SINE MIR 22 144 -64 223 206 16 16 chr5 135810287 135810350 -67275182 + GA-rich Low_complexity Low_complexity 1 63 0 184 283 17 17 chr5 135810575 135810635 -67274897 + L2 LINE L2 3175 3234 -38 590 258 163 14 chr5 135810711 135810854 -67274678 + MIR SINE MIR 2 187 -75 2320 103 3 0 chr5 135810854 135811154 -67274378 - AluSp SINE Alu -12 301 1 590 258 163 14 chr5 135811154 135811219 -67274313 + MIR SINE MIR 187 241 -21 344 250 50 0 chr5 135811246 135811326 -67274206 - MER91C DNA MER1_type -35 105 22 1993 160 3 7 chr5 135812214 135812520 -67273012 - AluJb SINE Alu -7 305 1 2151 122 0 22 chr5 135812729 135813048 -67272484 + AluSx SINE Alu 1 312 0 1979 148 0 3 chr5 135813154 135813500 -67272032 + AluSx SINE Alu 1 312 0 235 277 0 0 chr5 135813502 135813549 -67271983 + polypurine Low_complexity Low_complexity 3 49 0 256 149 0 0 chr5 135813652 135813699 -67271833 - Alu SINE Alu -7 294 248 1142 139 6 0 chr5 135813928 135814101 -67271431 - THE1B LTR MaLR -190 174 1 306 301 64 0 chr5 135814190 135814393 -67271139 + L1MC4a LINE L1 5678 5893 -1915 21 71 0 0 chr5 135814818 135814860 -67270672 + AT_rich Low_complexity Low_complexity 1 42 0 2311 117 3 0 chr5 135815021 135815329 -67270203 + AluSg SINE Alu 1 309 -1 536 312 21 0 chr5 135816614 135816770 -67268762 - MIR3 SINE MIR -20 188 29 1688 155 36 67 chr5 135817892 135818279 -67267253 - THE1C LTR MaLR 0 375 1 447 312 80 19 chr5 135818651 135818861 -67266671 + MIR SINE MIR 12 235 -27 698 213 0 0 chr5 135818955 135819082 -67266450 + FLAM_A SINE Alu 1 127 -6 668 227 80 49 chr5 135819558 135819783 -67265749 + MIR SINE MIR 25 256 -6 183 211 53 0 chr5 135819915 135819972 -67265560 + L2 LINE L2 1941 2000 -1314 202 280 210 10 chr5 135820684 135820784 -67264748 + L2 LINE L2 3145 3264 -8 241 279 101 16 chr5 135821367 135821496 -67264036 - MIR SINE MIR -57 205 66 502 234 89 37 chr5 135822403 135822617 -67262915 - MLT1L LTR MaLR 0 615 391 326 221 88 9 chr5 135822610 135822723 -67262809 - MLT1L LTR MaLR -347 268 147 * 273 247 82 12 chr5 135822811 135822896 -67262636 - MLT1L LTR MaLR -524 91 1 2232 110 17 3 chr5 135823550 135823851 -67261681 - AluSx SINE Alu -7 305 1 1710 179 19 32 chr5 135824218 135824530 -67261002 - AluJo SINE Alu -4 308 1 2392 87 0 0 chr5 135825050 135825350 -67260182 - AluSg SINE Alu -10 300 1 327 342 50 8 chr5 135825821 135825941 -67259591 + L3 LINE CR1 1447 1571 -6 5300 18 3 0 chr5 135826670 135827617 -67257915 - L1PA3 LINE L1 -469 5686 4736 3759 39 4 0 chr5 135827617 135828073 -67257459 + L1PA3 LINE L1 5694 6152 -3 254 154 0 64 chr5 135828219 135828297 -67257235 + (TA)n Simple_repeat Simple_repeat 2 74 0 181 78 47 47 chr5 135828301 135828365 -67257167 + (TATAG)n Simple_repeat Simple_repeat 2 65 0 2041 140 3 25 chr5 135828942 135829276 -67256256 - AluSx SINE Alu 0 312 1 792 197 0 0 chr5 135829345 135829477 -67256055 + FLAM_A SINE Alu 1 132 -1 1263 200 0 0 chr5 135831049 135831289 -67254243 + L1PB4 LINE L1 5910 6149 -7 676 193 0 22 chr5 135831433 135831568 -67253964 - FLAM_C SINE Alu 0 133 2 1950 134 7 7 chr5 135831955 135832253 -67253279 + AluSx SINE Alu 6 303 -9 276 154 0 0 chr5 135832261 135832313 -67253219 + G-rich Low_complexity Low_complexity 4 55 0 1874 210 28 56 chr5 135832320 135833106 -67252426 - L1MC4a LINE L1 -3 7809 7002 1976 162 7 3 chr5 135833106 135833408 -67252124 - AluJb SINE Alu -9 303 1 1874 210 28 56 chr5 135833408 135833455 -67252077 - L1MC4a LINE L1 -810 7002 6955 2073 134 0 28 chr5 135833455 135833776 -67251756 + AluSx SINE Alu 1 312 0 1874 210 28 56 chr5 135833776 135834096 -67251436 - L1MC4a LINE L1 -857 6955 6794 879 308 54 23 chr5 135834596 135834636 -67250896 + MLT1J LTR MaLR 1 38 -473 2152 101 35 0 chr5 135834636 135834924 -67250608 - AluSq SINE Alu -15 298 1 879 308 54 23 chr5 135834924 135834958 -67250574 + MLT1J LTR MaLR 38 69 -442 4096 87 9 0 chr5 135834958 135835507 -67250025 + MER41A LTR ERV1 1 554 0 879 308 54 23 chr5 135835507 135835926 -67249606 + MLT1J LTR MaLR 69 511 0 1356 183 139 0 chr5 135836339 135836613 -67248919 - AluJb SINE Alu 0 312 1 788 173 0 6 chr5 135836713 135836869 -67248663 + GA-rich Low_complexity Low_complexity 4 158 0 567 283 96 39 chr5 135837232 135837708 -67247824 - LTR33 LTR ERVL 0 521 1 1018 248 88 29 chr5 135838177 135838520 -67247012 + MLT1J LTR MaLR 1 363 -148 220 297 108 0 chr5 135840086 135840160 -67245372 + MIR SINE MIR 68 149 -113 1333 85 0 21 chr5 135840166 135840354 -67245178 + AluSq SINE Alu 128 311 -2 22 0 0 0 chr5 135840354 135840376 -67245156 + AT_rich Low_complexity Low_complexity 1 22 0 2073 120 3 3 chr5 135840385 135840677 -67244855 + AluSx SINE Alu 1 292 -20 252 0 0 0 chr5 135840688 135840716 -67244816 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2445 80 0 0 chr5 135840729 135841040 -67244492 + AluY SINE Alu 1 311 0 2392 70 0 3 chr5 135841095 135841394 -67244138 + AluY SINE Alu 1 298 -13 276 289 141 15 chr5 135841539 135841674 -67243858 + MIR SINE MIR 98 249 -13 237 313 170 14 chr5 135841680 135841827 -67243705 - MIR3 SINE MIR -23 185 16 2262 92 14 0 chr5 135843052 135843344 -67242188 - AluSc SINE Alu -12 297 2 971 258 149 34 chr5 135843361 135843728 -67241804 + MLT1G1 LTR MaLR 73 507 -88 2197 175 50 36 chr5 135843728 135844226 -67241306 + MLT1D LTR MaLR 1 505 0 971 258 149 34 chr5 135844226 135844327 -67241205 + MLT1G1 LTR MaLR 507 595 0 201 74 0 0 chr5 135845923 135845950 -67239582 + (A)n Simple_repeat Simple_repeat 1 27 0 600 321 79 25 chr5 135845976 135846369 -67239163 - MLT1K LTR MaLR -6 582 169 4277 106 34 63 chr5 135846536 135847335 -67238197 - L1MA4A LINE L1 -4 6299 5524 239 237 0 53 chr5 135847848 135847924 -67237608 - MER117 DNA MER1_type -118 79 8 1937 115 0 31 chr5 135848034 135848320 -67237212 + AluSg1 SINE Alu 1 277 -32 231 36 0 0 chr5 135848322 135848350 -67237182 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 2185 135 3 0 chr5 135849162 135849473 -67236059 - AluSx SINE Alu 0 312 1 2065 88 0 14 chr5 135849610 135849894 -67235638 - AluSx SINE Alu -32 280 1 2083 98 14 0 chr5 135850077 135850354 -67235178 - AluY SINE Alu -8 303 23 306 229 169 8 chr5 135850355 135850473 -67235059 + L1MC4 LINE L1 7120 7256 -786 2204 199 62 19 chr5 135850577 135851089 -67234443 - MLT1F LTR MaLR -8 534 1 794 269 72 52 chr5 135851141 135851739 -67233793 + L1MC5 LINE L1 7313 7922 -39 492 198 150 96 chr5 135853326 135853393 -67232139 + MER5A DNA MER1_type 14 76 -113 2355 101 0 0 chr5 135853393 135853699 -67231833 + AluSg SINE Alu 1 306 -4 492 198 150 96 chr5 135853699 135853798 -67231734 + MER5A DNA MER1_type 76 189 0 186 346 122 0 chr5 135853994 135854101 -67231431 + L2 LINE L2 3153 3272 0 * 553 282 98 6 chr5 135854099 135854262 -67231270 + MIR SINE MIR 11 188 -74 949 237 95 53 chr5 135854376 135854735 -67230797 - MLT1A2 LTR MaLR 0 374 1 817 113 0 53 chr5 135855128 135855302 -67230230 - AluSp/q SINE Alu 0 350 184 556 250 24 0 chr5 135855473 135855597 -67229935 + L2 LINE L2 1768 1894 -1420 1807 258 88 42 chr5 135855597 135856421 -67229111 + L2 LINE L2 2168 3060 -253 2208 210 155 17 chr5 135856421 135857003 -67228529 - MLT2F LTR ERVL 0 663 2 1807 258 88 42 chr5 135857003 135857270 -67228262 + L2 LINE L2 3060 3313 0 873 156 0 26 chr5 135857643 135857797 -67227735 - AluJb SINE Alu 0 312 163 2207 123 0 0 chr5 135858278 135858588 -67226944 - AluSg SINE Alu 0 310 1 28 0 0 0 chr5 135859088 135859116 -67226416 + AT_rich Low_complexity Low_complexity 1 28 0 197 200 0 0 chr5 135859390 135859425 -67226107 + MIR SINE MIR 218 252 -10 898 253 111 46 chr5 135859778 135860209 -67225323 - MLT1L LTR MaLR -8 607 149 866 108 0 0 chr5 135860405 135860516 -67225016 + AluSc SINE Alu 181 291 -18 2515 59 0 0 chr5 135860663 135860966 -67224566 + AluY SINE Alu 1 303 -8 201 339 34 0 chr5 135861333 135861392 -67224140 + L2 LINE L2 3197 3257 -56 180 0 0 0 chr5 135862389 135862409 -67223123 + (A)n Simple_repeat Simple_repeat 1 20 0 2085 158 44 72 chr5 135863025 135863550 -67221982 + LTR54 LTR ERV1 1 510 0 267 234 0 43 chr5 135863568 135863662 -67221870 - L1MC4 LINE L1 -1339 6703 6614 * 282 239 23 0 chr5 135863580 135863668 -67221864 + L1MC4 LINE L1 6614 6703 -1339 243 0 0 0 chr5 135863668 135863695 -67221837 + (TA)n Simple_repeat Simple_repeat 1 27 0 2053 151 0 7 chr5 135863695 135864000 -67221532 - AluJb SINE Alu -9 303 1 180 0 0 0 chr5 135864051 135864071 -67221461 + (T)n Simple_repeat Simple_repeat 1 20 0 303 266 73 57 chr5 135864319 135864443 -67221089 + L2 LINE L2 1462 1587 -1727 241 283 116 6 chr5 135864517 135864690 -67220842 + L1ME4a LINE L1 5843 6034 -87 25 0 0 0 chr5 135864758 135864783 -67220749 + AT_rich Low_complexity Low_complexity 1 25 0 680 247 12 24 chr5 135864902 135865068 -67220464 + MER5A DNA MER1_type 26 189 0 2196 109 3 29 chr5 135865329 135865641 -67219891 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr5 135866214 135866242 -67219290 + AT_rich Low_complexity Low_complexity 1 28 0 766 189 0 8 chr5 135866396 135866528 -67219004 + FLAM_C SINE Alu 1 131 -12 25 0 0 0 chr5 135866802 135866827 -67218705 + AT_rich Low_complexity Low_complexity 1 25 0 2271 105 3 10 chr5 135867285 135867589 -67217943 + AluSx SINE Alu 1 302 -10 332 283 0 30 chr5 135867720 135867819 -67217713 - MIR SINE MIR -57 205 110 1551 221 94 29 chr5 135868037 135868517 -67217015 - MLT1J LTR MaLR 0 511 1 617 200 28 28 chr5 135868620 135868765 -67216767 - Charlie8 DNA MER1_type -2272 145 1 814 173 13 0 chr5 135869540 135869690 -67215842 - MER45A DNA AcHobo 0 178 27 2205 107 0 3 chr5 135869957 135870429 -67215103 + AluSq SINE Alu 1 471 0 2358 163 14 30 chr5 135870510 135870951 -67214581 - Tigger2a DNA MER2_type 0 434 1 285 218 0 0 chr5 135871085 135871163 -67214369 + CT-rich Low_complexity Low_complexity 4 81 0 1037 166 0 12 chr5 135871532 135871695 -67213837 - FRAM SINE Alu -19 157 1 216 355 118 14 chr5 135871806 135872026 -67213506 + L2 LINE L2 1062 1304 -2010 879 254 113 28 chr5 135872319 135872646 -67212886 + MLT1H LTR MaLR 195 549 0 1997 185 26 31 chr5 135872962 135873378 -67212154 - MLT2D LTR ERVL 0 414 1 255 79 0 0 chr5 135873569 135873607 -67211925 + (TTCC)n Simple_repeat Simple_repeat 2 39 0 700 174 0 0 chr5 135873607 135873728 -67211804 - FLAM_A SINE Alu -1 141 21 1085 207 80 115 chr5 135873918 135874387 -67211145 + MLT1F1 LTR MaLR 1 462 -105 450 236 68 20 chr5 135874400 135874548 -67210984 + MLT1J LTR MaLR 155 309 -202 400 240 0 0 chr5 135874546 135874646 -67210886 + MLT1J LTR MaLR 468 567 0 * 1028 262 136 18 chr5 135875425 135875867 -67209665 + MLT1J LTR MaLR 3 496 -15 1083 132 26 5 chr5 135876255 135876444 -67209088 - MER3 DNA MER1_type -11 198 6 249 184 0 40 chr5 135876772 135876848 -67208684 + (CGGGG)n Simple_repeat Simple_repeat 2 74 0 573 74 0 12 chr5 135878247 135878328 -67207204 + MADE1 DNA Mariner 1 80 0 196 241 157 24 chr5 135878956 135879039 -67206493 + MER5A DNA MER1_type 1 94 -95 330 247 65 11 chr5 135879108 135879201 -67206331 - MER5A DNA MER1_type -83 106 9 4675 136 30 4 chr5 135879513 135880315 -67205217 - L1MA5 LINE L1 -2 6298 5476 1237 134 16 0 chr5 135880316 135880503 -67205029 - AluSg/x SINE Alu -7 305 116 510 120 0 5 chr5 135880503 135880600 -67204932 - L1P2 LINE L1 -687 5467 5374 2099 158 137 46 chr5 135880951 135881521 -67204011 - L1MB7 LINE L1 0 6184 5563 1160 92 60 16 chr5 135881552 135881736 -67203796 - L1PA10 LINE L1 -11 6157 5966 180 282 28 14 chr5 135882217 135882288 -67203244 - L2 LINE L2 -1090 2224 2153 2262 111 7 0 chr5 135882374 135882680 -67202852 - AluSg SINE Alu -2 308 1 1908 219 35 8 chr5 135882997 135883505 -67202027 - L1ME1 LINE L1 -180 5920 5399 737 180 30 123 chr5 135883506 135883899 -67201633 - MER63 DNA MER1_type 0 1061 1 402 191 48 60 chr5 135883901 135884038 -67201494 - L1ME1 LINE L1 -871 5407 5270 2172 134 0 3 chr5 135884038 135884351 -67201181 - AluSx SINE Alu 0 312 1 2150 125 0 3 chr5 135884353 135884649 -67200883 - AluSx SINE Alu -17 295 1 402 191 48 60 chr5 135884649 135884676 -67200856 - L1ME1 LINE L1 -1009 5269 5242 2196 113 0 31 chr5 135884739 135885057 -67200475 - AluSc SINE Alu -1 308 1 4914 219 92 93 chr5 135885058 135887115 -67198417 - L1ME1 LINE L1 -936 5144 2963 779 179 0 14 chr5 135887115 135887260 -67198272 - FLAM_C SINE Alu 0 143 1 4914 219 92 93 chr5 135887260 135888423 -67197109 - L1ME1 LINE L1 -3117 2963 1801 2099 136 0 10 chr5 135889047 135889356 -67196176 + AluSx SINE Alu 1 306 -6 2266 255 47 100 chr5 135889699 135891048 -67194484 - L1ME1 LINE L1 -4371 1709 391 386 319 71 31 chr5 135891039 135891239 -67194293 - L1ME1 LINE L1 -5573 497 283 * 567 53 0 0 chr5 135891239 135891314 -67194218 + (CA)n Simple_repeat Simple_repeat 1 75 0 386 319 71 31 chr5 135891314 135891367 -67194165 - L1ME1 LINE L1 -5787 283 234 1052 221 179 66 chr5 135891746 135891935 -67193597 - MLT1F1 LTR MaLR 0 567 401 2079 112 7 10 chr5 135891935 135892231 -67193301 - AluSx SINE Alu -17 295 1 1052 221 179 66 chr5 135892231 135892422 -67193110 - MLT1F1 LTR MaLR -166 401 144 1258 181 54 18 chr5 135892608 135892885 -67192647 - L1M4 LINE L1 -1928 4218 3932 2294 98 3 10 chr5 135892931 135893102 -67192430 - AluSp SINE Alu -8 305 135 2158 107 0 0 chr5 135893102 135893393 -67192139 - AluSx SINE Alu -21 291 1 2294 98 3 10 chr5 135893393 135893528 -67192004 - AluSp SINE Alu -178 135 1 223 352 0 14 chr5 135893643 135893714 -67191818 - L2 LINE L2 -52 3220 3151 2323 84 0 10 chr5 135894127 135894425 -67191107 + AluSq SINE Alu 5 299 -14 2617 242 88 14 chr5 135894442 135895418 -67190114 + L1ME3A LINE L1 5123 6163 -7 2286 76 3 23 chr5 135895439 135895743 -67189789 + AluSq SINE Alu 1 298 -15 2269 105 0 0 chr5 135895851 135896147 -67189385 + AluSx SINE Alu 12 307 -5 1681 160 71 0 chr5 135896551 135896667 -67188865 + AluJb SINE Alu 1 107 -205 198 0 0 0 chr5 135896667 135896689 -67188843 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1681 160 71 0 chr5 135896689 135896854 -67188678 + AluJb SINE Alu 107 302 -10 27 29 0 0 chr5 135897746 135897780 -67187752 + AT_rich Low_complexity Low_complexity 1 34 0 249 214 71 61 chr5 135897941 135898039 -67187493 + U13 snRNA snRNA 6 104 0 1564 211 3 0 chr5 135898754 135899039 -67186493 - AluJo SINE Alu -26 286 1 201 343 110 27 chr5 135900739 135900885 -67184647 + L2 LINE L2 3133 3290 -23 24 0 0 0 chr5 135901405 135901429 -67184103 + AT_rich Low_complexity Low_complexity 1 24 0 990 246 46 33 chr5 135902199 135902528 -67183004 + L1ME3A LINE L1 5811 6143 -27 2223 119 0 0 chr5 135903134 135903437 -67182095 + AluSx SINE Alu 1 303 -9 342 0 0 0 chr5 135903464 135903502 -67182030 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr5 135903629 135903654 -67181878 + AT_rich Low_complexity Low_complexity 1 25 0 352 371 56 6 chr5 135904339 135904517 -67181015 - L2 LINE L2 -522 2792 2606 479 263 30 30 chr5 135904792 135904925 -67180607 - L2 LINE L2 -1 3312 3180 238 343 84 14 chr5 135904928 135905071 -67180461 - L2 LINE L2 -974 2340 2188 1870 119 54 4 chr5 135905668 135905946 -67179586 + AluSx SINE Alu 1 292 -20 2048 124 7 10 chr5 135906177 135906476 -67179056 - AluSg SINE Alu -12 298 1 366 77 0 19 chr5 135906665 135906717 -67178815 - U6 snRNA snRNA -56 51 1 499 172 14 163 chr5 135906755 135906831 -67178701 - AluSp SINE Alu -16 297 211 2168 107 3 0 chr5 135906831 135907122 -67178410 + AluSx SINE Alu 11 302 -10 499 172 14 163 chr5 135907122 135907254 -67178278 - AluSp SINE Alu -102 211 120 251 219 0 0 chr5 135907517 135907558 -67177974 - AluJ/monomer SINE Alu -260 42 2 2319 88 0 0 chr5 135907594 135907891 -67177641 - AluY SINE Alu -14 297 1 222 37 0 0 chr5 135907906 135907933 -67177599 + (TG)n Simple_repeat Simple_repeat 2 28 0 237 108 0 0 chr5 135908046 135908083 -67177449 + (CA)n Simple_repeat Simple_repeat 2 38 0 306 0 0 0 chr5 135908514 135908548 -67176984 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1526 186 8 53 chr5 135908854 135908918 -67176614 - L1MB8 LINE L1 -1 6177 6112 1598 167 87 0 chr5 135908918 135909193 -67176339 + AluJb SINE Alu 1 299 -13 1526 186 8 53 chr5 135909193 135909504 -67176028 - L1MB8 LINE L1 -66 6112 5819 1717 176 36 12 chr5 135910915 135911250 -67174282 - MER2 DNA MER2_type 0 344 2 182 313 36 0 chr5 135911803 135911886 -67173646 + L3b LINE CR1 1325 1410 -173 3922 25 0 0 chr5 135911905 135912337 -67173195 + SVA Other Other 955 1386 0 209 236 0 36 chr5 135913383 135913438 -67172094 + MIR SINE MIR 54 106 -156 2130 83 14 4 chr5 135913468 135913780 -67171752 + AluSc SINE Alu 1 315 0 1287 258 60 73 chr5 135913906 135914727 -67170805 + L2 LINE L2 2493 3313 0 210 299 0 19 chr5 135915190 135915297 -67170235 + (TA)n Simple_repeat Simple_repeat 2 106 0 314 298 44 6 chr5 135915405 135915563 -67169969 + MER103 DNA DNA 1 164 -2 2216 97 33 0 chr5 135915681 135915980 -67169552 - AluSg SINE Alu -1 309 1 25 0 0 0 chr5 135916397 135916422 -67169110 + AT_rich Low_complexity Low_complexity 1 25 0 2220 94 0 3 chr5 135916669 135916966 -67168566 - AluSg SINE Alu -14 296 1 29 28 0 0 chr5 135919337 135919373 -67166159 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr5 135919950 135919995 -67165537 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr5 135920601 135920627 -67164905 + AT_rich Low_complexity Low_complexity 1 26 0 2164 99 14 0 chr5 135922173 135922467 -67163065 + AluSc SINE Alu 1 298 -11 2334 67 3 7 chr5 135923374 135923672 -67161860 - AluY SINE Alu -14 297 1 376 235 67 13 chr5 135923763 135923895 -67161637 - L1MB8 LINE L1 -474 5647 5537 301 243 43 57 chr5 135923939 135924008 -67161524 - L1MB8 LINE L1 -805 5437 5369 2075 109 31 0 chr5 135924008 135924301 -67161231 - AluSc SINE Alu -7 302 1 301 243 43 57 chr5 135924301 135924371 -67161161 - L1MB8 LINE L1 -873 5369 5300 234 62 0 0 chr5 135925624 135925656 -67159876 + (TG)n Simple_repeat Simple_repeat 2 33 0 321 26 0 0 chr5 135925698 135925736 -67159796 + (TG)n Simple_repeat Simple_repeat 2 39 0 977 171 35 35 chr5 135925773 135925838 -67159694 - MER30 DNA MER1_type -31 199 135 2470 66 0 3 chr5 135925838 135926143 -67159389 + AluY SINE Alu 1 304 -7 977 171 35 35 chr5 135926143 135926276 -67159256 - MER30 DNA MER1_type -94 136 1 222 326 102 10 chr5 135926890 135926988 -67158544 - MIR SINE MIR -149 113 7 21 0 0 0 chr5 135927385 135927406 -67158126 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 135930666 135930704 -67154828 + AT_rich Low_complexity Low_complexity 1 38 0 2149 96 13 7 chr5 135930755 135931057 -67154475 + AluSq SINE Alu 1 304 -9 2055 127 0 0 chr5 135931116 135931423 -67154109 - AluSx SINE Alu 0 307 1 324 0 0 0 chr5 135931694 135931730 -67153802 + (CA)n Simple_repeat Simple_repeat 2 37 0 2248 121 0 0 chr5 135932645 135932952 -67152580 + AluSq SINE Alu 1 307 -6 222 306 48 0 chr5 135933167 135933229 -67152303 + L2 LINE L2 3228 3292 -21 1015 145 0 35 chr5 135933243 135933415 -67152117 + FAM SINE Alu 1 166 -9 911 152 197 30 chr5 135935274 135935543 -67149989 - MER33 DNA MER1_type -10 314 1 185 286 57 43 chr5 135935886 135935956 -67149576 - MIR3 SINE MIR -26 182 112 2522 69 0 0 chr5 135936864 135937167 -67148365 + AluSc SINE Alu 2 304 -5 265 332 54 6 chr5 135937753 135937914 -67147618 + MIR SINE MIR 1 171 -37 1511 109 0 118 chr5 135939347 135939678 -67145854 - AluSx SINE Alu -20 292 1 932 242 98 39 chr5 135939767 135939828 -67145704 - HAL1 LINE L1 -1 2506 2450 1940 151 0 25 chr5 135939828 135940147 -67145385 + AluJb SINE Alu 1 311 -1 932 242 98 39 chr5 135940147 135940494 -67145038 - HAL1 LINE L1 -57 2450 2074 * 1543 168 57 24 chr5 135940490 135940824 -67144708 - L1MC3 LINE L1 0 7785 7441 522 282 64 46 chr5 135940793 135941183 -67144349 - HAL1 LINE L1 -423 2084 1688 * 1851 244 149 51 chr5 135941241 135941444 -67144088 - HAL1 LINE L1 -617 1890 1708 2162 120 3 10 chr5 135941444 135941743 -67143789 - AluSx SINE Alu -15 297 1 1851 244 149 51 chr5 135941743 135941982 -67143550 - HAL1 LINE L1 -799 1708 1494 1997 146 0 13 chr5 135941982 135942283 -67143249 + AluSx SINE Alu 1 297 -15 1851 244 149 51 chr5 135942283 135943060 -67142472 - HAL1 LINE L1 -1013 1494 794 2241 87 4 0 chr5 135943060 135943336 -67142196 - AluSp SINE Alu -35 278 2 1851 244 149 51 chr5 135943336 135943762 -67141770 - HAL1 LINE L1 -1713 794 4 1876 119 73 21 chr5 135943776 135944062 -67141470 + AluSx SINE Alu 3 303 -9 307 102 0 0 chr5 135944095 135944144 -67141388 - Alu SINE Alu -3 299 251 789 200 159 10 chr5 135944477 135944672 -67140860 + MSTD LTR MaLR 173 396 0 360 294 115 9 chr5 135944676 135944894 -67140638 - L1M4 LINE L1 -2145 4001 3761 2160 119 3 19 chr5 135945735 135946046 -67139486 - AluSx SINE Alu -6 306 1 43 56 0 0 chr5 135947473 135947544 -67137988 + GC_rich Low_complexity Low_complexity 1 71 0 1860 158 7 0 chr5 135949460 135949751 -67135781 - AluJb SINE Alu -19 293 1 364 203 54 0 chr5 135949856 135949930 -67135602 - L2 LINE L2 -5 3308 3231 1738 174 25 7 chr5 135950071 135950353 -67135179 - AluJo SINE Alu -25 287 1 2138 97 3 23 chr5 135950378 135950688 -67134844 + AluSx SINE Alu 1 304 -8 188 261 31 15 chr5 135952012 135952077 -67133455 - L2 LINE L2 -558 2756 2691 1785 176 73 3 chr5 135952077 135952417 -67133115 - MLT1A1 LTR MaLR 0 365 2 2099 136 0 7 chr5 135953114 135953422 -67132110 - AluSx SINE Alu -4 308 3 295 222 155 68 chr5 135953681 135953933 -67131599 - L1MC5 LINE L1 -63 7898 7625 295 197 26 0 chr5 135954027 135954103 -67131429 - L1MC4 LINE L1 -1339 6703 6626 631 88 0 49 chr5 135954117 135954219 -67131313 - L1PA8 LINE L1 0 6172 6076 1840 168 7 3 chr5 135954303 135954600 -67130932 - AluJb SINE Alu -14 298 1 221 113 0 183 chr5 135954973 135955044 -67130488 + L2 LINE L2 3215 3272 0 2642 42 0 7 chr5 135955073 135955383 -67130149 - AluY SINE Alu -2 309 2 653 192 0 8 chr5 135955617 135955742 -67129790 - FLAM_C SINE Alu -6 127 4 2683 61 0 0 chr5 135956184 135956495 -67129037 + AluY SINE Alu 1 311 0 364 227 80 40 chr5 135956555 135956705 -67128827 - L1MC4 LINE L1 -1841 5967 5812 2533 115 87 23 chr5 135956708 135957019 -67128513 - Tigger1 DNA MER2_type 0 2418 2070 2223 108 10 3 chr5 135957019 135957325 -67128207 - AluSg SINE Alu -2 308 1 2533 115 87 23 chr5 135957325 135957448 -67128084 - Tigger1 DNA MER2_type -348 2070 1956 753 183 0 8 chr5 135957458 135957584 -67127948 + FLAM_C SINE Alu 3 127 -16 1300 122 0 0 chr5 135957584 135957772 -67127760 - Tigger1 DNA MER2_type -458 1960 1773 869 163 27 0 chr5 135957772 135957919 -67127613 - Tigger1 DNA MER2_type -1986 432 282 3578 162 26 43 chr5 135957919 135958483 -67127049 - L1PA15 LINE L1 -1 6164 5615 2077 124 38 0 chr5 135958483 135958773 -67126759 - AluSq SINE Alu -12 301 1 3578 162 26 43 chr5 135958773 135958966 -67126566 - L1PA15 LINE L1 -550 5615 5420 2470 86 0 0 chr5 135958966 135959269 -67126263 - AluSp SINE Alu -10 303 1 457 174 12 0 chr5 135959269 135959355 -67126177 - L1PA15 LINE L1 -1154 4992 4906 2992 117 0 15 chr5 135959357 135959746 -67125786 - L1PA13 LINE L1 -1 6162 5780 2321 66 0 0 chr5 135959746 135960017 -67125515 - AluSg SINE Alu -18 292 22 2992 117 0 15 chr5 135960017 135960087 -67125445 - L1PA13 LINE L1 -383 5780 5710 1737 159 13 13 chr5 135960091 135960399 -67125133 - Tigger1 DNA MER2_type -2110 308 1 1232 256 25 25 chr5 135960425 135960784 -67124748 - L1MC4 LINE L1 -2103 5705 5347 1122 167 0 0 chr5 135960831 135961005 -67124527 - AluJb SINE Alu -138 174 1 416 234 63 18 chr5 135961165 135961276 -67124256 + FLAM_A SINE Alu 12 127 -15 1517 205 14 7 chr5 135961281 135961569 -67123963 + AluJo SINE Alu 3 292 -20 4368 135 78 7 chr5 135961579 135962306 -67123226 - MER4E LTR ERV1 0 779 1 2306 93 0 3 chr5 135962552 135962853 -67122679 - AluY SINE Alu -11 300 1 2075 129 0 0 chr5 135963015 135963295 -67122237 + AluSx SINE Alu 1 280 -32 1210 125 12 0 chr5 135963314 135963482 -67122050 - ERVL LTR ERVL -1056 4708 4539 188 354 9 9 chr5 135963989 135964102 -67121430 - L2 LINE L2 -243 3029 2917 479 266 89 53 chr5 135964270 135964291 -67121241 + L1MC/D LINE L1 5350 5369 -850 2245 65 45 0 chr5 135964291 135964583 -67120949 + AluY SINE Alu 1 305 -6 479 266 89 53 chr5 135964583 135964926 -67120606 + L1MC/D LINE L1 5369 5737 -482 1328 271 75 15 chr5 135964929 135965383 -67120149 - L2 LINE L2 0 3313 2833 1539 175 3 98 chr5 135965474 135965812 -67119720 - AluJb SINE Alu -6 306 1 410 278 28 9 chr5 135965931 135966039 -67119493 - L2 LINE L2 -16 3297 3188 967 276 24 32 chr5 135966044 135966336 -67119196 - L2 LINE L2 -600 2714 2424 5128 91 7 11 chr5 135966336 135967030 -67118502 - LTR8 LTR ERV1 0 691 1 967 276 24 32 chr5 135967030 135967078 -67118454 - L2 LINE L2 -890 2424 2377 315 196 22 65 chr5 135967081 135967173 -67118359 - MLT2C1 LTR ERVL -305 92 5 377 203 51 0 chr5 135967176 135967255 -67118277 - Ricksha DNA DNA -907 347 265 2256 109 0 34 chr5 135967274 135967596 -67117936 - AluSx SINE Alu -1 311 1 15649 143 35 31 chr5 135967747 135968131 -67117401 - ERVL-C1 LTR ERVL -57 5707 5326 1975 124 4 0 chr5 135968131 135968406 -67117126 - AluSx SINE Alu -36 276 1 15649 143 35 31 chr5 135968406 135970685 -67114847 - ERVL-C1 LTR ERVL -438 5326 3034 641 241 46 11 chr5 135970685 135970859 -67114673 - MLT2D LTR ERVL -230 184 5 810 206 35 6 chr5 135972880 135973050 -67112482 - MER5B DNA MER1_type -3 175 1 344 319 78 0 chr5 135973143 135973259 -67112273 - MER5B DNA MER1_type -39 139 15 2401 85 0 7 chr5 135973443 135973750 -67111782 + AluSq SINE Alu 1 305 -8 232 287 75 11 chr5 135973804 135973898 -67111634 + MIR SINE MIR 32 131 -131 1883 149 71 3 chr5 135974429 135974751 -67110781 + MER2 DNA MER2_type 1 344 0 1640 179 7 26 chr5 135974922 135975230 -67110302 - AluJb SINE Alu -10 302 1 250 310 0 0 chr5 135975582 135975653 -67109879 - L2 LINE L2 0 3272 3202 2279 110 0 13 chr5 135975718 135976027 -67109505 - AluSq SINE Alu -8 305 1 345 247 10 10 chr5 135976159 135976256 -67109276 + MIR SINE MIR 117 213 -49 332 257 93 80 chr5 135976674 135976900 -67108632 + MIR SINE MIR 7 235 -27 439 114 143 0 chr5 135977588 135977658 -67107874 + MADE1 DNA Mariner 1 80 0 788 163 8 0 chr5 135977749 135977878 -67107654 - AluSq SINE Alu -15 298 169 278 143 0 0 chr5 135977881 135977923 -67107609 + AluSq SINE Alu 133 174 -129 1414 94 0 0 chr5 135977931 135978102 -67107430 - AluSq SINE Alu -142 171 1 186 362 0 0 chr5 135978730 135978788 -67106744 - L2 LINE L2 -223 3049 2992 24 32 0 0 chr5 135979490 135979521 -67106011 + AT_rich Low_complexity Low_complexity 1 31 0 1529 134 83 35 chr5 135980655 135980945 -67104587 + AluJo SINE Alu 9 312 0 1044 191 92 48 chr5 135980945 135981238 -67104294 - MER33 DNA MER1_type -18 306 1 546 231 0 16 chr5 135981495 135981616 -67103916 + MIR SINE MIR 36 154 -108 225 0 0 0 chr5 135981631 135981656 -67103876 + (TATG)n Simple_repeat Simple_repeat 2 26 0 838 126 0 8 chr5 135981660 135981779 -67103753 - FLAM_C SINE Alu -15 118 1 226 293 146 0 chr5 135981812 135981894 -67103638 + MIR SINE MIR 156 249 -13 405 195 103 0 chr5 135983357 135983444 -67102088 + MER5A DNA MER1_type 10 105 -84 458 296 48 21 chr5 135983491 135983677 -67101855 + MIR SINE MIR 16 206 -56 273 240 10 10 chr5 135983679 135983775 -67101757 + (TA)n Simple_repeat Simple_repeat 1 96 0 1508 198 70 0 chr5 135983932 135984205 -67101327 - AluJo SINE Alu -14 298 7 1755 157 3 27 chr5 135985603 135985903 -67099629 - AluJo SINE Alu -7 305 13 2045 129 23 13 chr5 135986203 135986512 -67099020 - AluSx SINE Alu 0 312 1 1082 107 384 21 chr5 135987791 135988028 -67097504 - MER1B DNA MER1_type -55 284 1 2274 71 0 55 chr5 135988507 135988817 -67096715 + AluSg SINE Alu 1 293 -17 27 49 0 0 chr5 135988934 135988975 -67096557 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 135989086 135989109 -67096423 + AT_rich Low_complexity Low_complexity 1 23 0 588 348 21 12 chr5 135989135 135989471 -67096061 - HAL1 LINE L1 -871 1636 1298 * 674 269 11 31 chr5 135989465 135989684 -67095848 - L1MEd LINE L1 -4970 1149 934 2196 120 3 0 chr5 135989684 135989976 -67095556 - AluSq SINE Alu -20 293 1 674 269 11 31 chr5 135989976 135990016 -67095516 - L1MEd LINE L1 -5185 934 895 691 246 153 5 chr5 135990297 135990512 -67095020 + MIR SINE MIR 3 249 -13 1987 131 3 7 chr5 135990824 135991114 -67094418 - AluSx SINE Alu -23 289 1 430 176 177 9 chr5 135991122 135991239 -67094293 - L1MC4 LINE L1 0 8040 7882 201 259 0 0 chr5 135991261 135991319 -67094213 + (TA)n Simple_repeat Simple_repeat 1 58 0 1417 162 35 4 chr5 135991319 135991548 -67093984 + MER46A DNA MER2_type 1 236 0 281 270 0 0 chr5 135991554 135991643 -67093889 + L1MC4 LINE L1 6615 6703 -1339 * 306 227 23 0 chr5 135991563 135991651 -67093881 - L1MC4 LINE L1 -1339 6703 6614 216 97 0 0 chr5 135991652 135991683 -67093849 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 239 104 104 0 chr5 135991683 135991731 -67093801 + LTR66 LTR ERVL 398 450 -160 1738 228 125 43 chr5 135991740 135992419 -67093113 - L1MC4 LINE L1 -211 7831 7097 2153 123 0 3 chr5 135992428 135992729 -67092803 - AluSx SINE Alu -12 300 1 228 213 0 0 chr5 135993271 135993318 -67092214 + L1ME LINE L1 5868 5914 -207 255 225 92 33 chr5 135994011 135994131 -67091401 - L1MC4 LINE L1 -2 8040 7914 200 122 24 0 chr5 135994155 135994196 -67091336 + (CA)n Simple_repeat Simple_repeat 2 43 0 1431 214 87 88 chr5 135994284 135994387 -67091145 - L1MC4 LINE L1 -800 7242 7140 181 56 28 28 chr5 135994387 135994423 -67091109 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1870 122 56 0 chr5 135994426 135994696 -67090836 - AluSq SINE Alu -28 285 1 1431 214 87 88 chr5 135994696 135994709 -67090823 - L1MC4 LINE L1 -904 7138 7126 207 0 0 0 chr5 135994709 135994732 -67090800 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2102 110 17 0 chr5 135994732 135995022 -67090510 - AluSx SINE Alu -17 295 1 1431 214 87 88 chr5 135995022 135995533 -67089999 - L1MC4 LINE L1 -914 7128 6610 330 293 57 52 chr5 135995570 135995716 -67089816 - L1MC4a LINE L1 -1376 6432 6283 1835 117 38 17 chr5 135995716 135996006 -67089526 + AluSx SINE Alu 1 296 -16 330 293 57 52 chr5 135996006 135996071 -67089461 - L1MC4a LINE L1 -1525 6283 6220 282 207 41 74 chr5 135996198 135996319 -67089213 - L1MC4a LINE L1 -1759 6049 5933 617 288 26 22 chr5 135996355 135996584 -67088948 - L1MC4a LINE L1 -1875 5933 5704 228 311 38 47 chr5 135996604 135996710 -67088822 - L2 LINE L2 -25 3247 3143 27 29 0 0 chr5 135997163 135997197 -67088335 + AT_rich Low_complexity Low_complexity 1 34 0 2076 138 3 0 chr5 135997850 135998146 -67087386 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 135999289 135999312 -67086220 + AT_rich Low_complexity Low_complexity 1 23 0 297 299 72 10 chr5 136000726 136000823 -67084709 - MER5B DNA MER1_type -75 103 1 1804 172 13 10 chr5 136001389 136001692 -67083840 - AluJo SINE Alu -8 304 1 187 242 22 88 chr5 136001774 136001865 -67083667 - L3 LINE CR1 -135 1442 1358 368 149 45 0 chr5 136001931 136001998 -67083534 - L1MA9 LINE L1 0 6312 6243 1275 143 23 19 chr5 136002001 136002217 -67083315 - AluJo SINE Alu -10 302 86 632 134 0 42 chr5 136002217 136002336 -67083196 - L1MA9 LINE L1 -64 6248 6135 1803 177 0 10 chr5 136002469 136002780 -67082752 + AluJb SINE Alu 1 308 -4 2325 118 0 0 chr5 136002903 136003207 -67082325 + AluSq SINE Alu 1 304 -9 2445 152 24 79 chr5 136004269 136004761 -67080771 - LTR32 LTR ERVL 0 471 7 217 314 67 88 chr5 136004845 136005084 -67080448 + L2 LINE L2 2851 3084 -188 1849 153 0 14 chr5 136005088 136005383 -67080149 - AluJb SINE Alu -9 303 13 2383 94 0 0 chr5 136006159 136006467 -67079065 - AluSp SINE Alu -5 308 1 31 0 0 0 chr5 136006505 136006536 -67078996 + AT_rich Low_complexity Low_complexity 1 31 0 1094 144 116 0 chr5 136007466 136007639 -67077893 + MER46A DNA MER2_type 44 236 0 374 339 8 0 chr5 136008093 136008223 -67077309 + MER94 DNA DNA 1 131 -3 555 232 56 60 chr5 136008433 136008496 -67077036 - MIR SINE MIR -55 207 145 2122 112 7 3 chr5 136008496 136008792 -67076740 - AluSq SINE Alu -16 297 1 555 232 56 60 chr5 136008792 136008932 -67076600 - MIR SINE MIR -117 145 4 786 228 204 22 chr5 136008958 136009374 -67076158 - MER113 DNA MER1_type? -28 493 2 24 0 0 0 chr5 136009872 136009896 -67075636 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 136010542 136010564 -67074968 + AT_rich Low_complexity Low_complexity 1 22 0 425 285 26 13 chr5 136010715 136010866 -67074666 + L1MC4a LINE L1 5783 5935 -1873 597 287 106 0 chr5 136011284 136011472 -67074060 - MIR SINE MIR -24 238 31 299 286 92 0 chr5 136011734 136011832 -67073700 + L2 LINE L2 3204 3310 -3 19600 23 1 6 chr5 136012452 136014719 -67070813 - L1PA3 LINE L1 -1 6154 3901 10446 53 22 48 chr5 136014719 136016136 -67069396 - SVA Other Other -2 1384 5 19600 23 1 6 chr5 136016136 136016836 -67068696 - L1PA3 LINE L1 -2254 3901 3199 778 180 0 14 chr5 136016985 136017124 -67068408 - MER46A DNA MER2_type 0 236 100 455 319 77 54 chr5 136017136 136017328 -67068204 + L2 LINE L2 2507 2693 -621 1786 159 7 17 chr5 136017328 136017623 -67067909 + AluJo SINE Alu 1 292 -20 455 319 77 54 chr5 136017623 136017819 -67067713 + L2 LINE L2 2693 2904 -410 236 342 107 18 chr5 136017868 136018093 -67067439 + L2 LINE L2 3027 3271 -1 2320 84 34 0 chr5 136018972 136019269 -67066263 + AluSc SINE Alu 1 307 -2 199 307 23 68 chr5 136019315 136019403 -67066129 - L3 LINE CR1 -415 1162 1079 2487 56 0 0 chr5 136019784 136020070 -67065462 + AluY SINE Alu 1 286 -25 213 39 0 0 chr5 136020074 136020100 -67065432 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 514 156 0 0 chr5 136020113 136020190 -67065342 + AluS SINE Alu 2 78 -235 185 309 36 0 chr5 136020577 136020632 -67064900 + L2 LINE L2 3239 3295 -18 240 297 8 68 chr5 136020636 136020754 -67064778 - MIR3 SINE MIR -13 195 85 21 57 0 0 chr5 136021635 136021670 -67063862 + AT_rich Low_complexity Low_complexity 1 35 0 238 276 37 75 chr5 136022595 136022729 -67062803 - MIR3 SINE MIR -35 173 45 866 188 0 0 chr5 136022878 136023011 -67062521 - FLAM_C SINE Alu 0 133 1 2361 99 0 0 chr5 136024234 136024536 -67060996 - AluSx SINE Alu -9 303 2 577 270 24 76 chr5 136024630 136024919 -67060613 + L2 LINE L2 3026 3299 -14 1712 169 0 40 chr5 136025032 136025357 -67060175 + AluJo SINE Alu 1 312 0 2970 167 34 47 chr5 136026056 136026612 -67058920 - MER44D DNA MER2_type 0 605 2 606 279 52 26 chr5 136026624 136026857 -67058675 - MIR SINE MIR -4 258 20 211 221 8 49 chr5 136026932 136027054 -67058478 + C-rich Low_complexity Low_complexity 1 117 0 255 211 7 61 chr5 136027178 136027325 -67058207 + G-rich Low_complexity Low_complexity 4 142 0 606 279 52 26 chr5 136027400 136027633 -67057899 + MIR SINE MIR 20 258 -4 2944 169 34 47 chr5 136027645 136028201 -67057331 + MER44D DNA MER2_type 2 605 0 1256 158 7 104 chr5 136028698 136028976 -67056556 - AluJo SINE Alu -61 251 1 871 287 98 54 chr5 136029253 136029389 -67056143 - L2 LINE L2 -31 3282 3153 308 94 19 0 chr5 136029389 136029442 -67056090 + (TG)n Simple_repeat Simple_repeat 1 54 0 871 287 98 54 chr5 136029442 136029733 -67055799 - L2 LINE L2 -160 3153 2836 315 223 165 0 chr5 136029750 136029853 -67055679 - L2 LINE L2 -610 2704 2585 * 726 304 114 36 chr5 136029846 136030231 -67055301 + L3 LINE CR1 657 1071 -506 752 280 7 69 chr5 136030456 136030731 -67054801 - MIR SINE MIR -3 259 2 412 341 55 12 chr5 136030912 136031076 -67054456 + L3 LINE CR1 1069 1239 -338 645 253 178 22 chr5 136031146 136031415 -67054117 + L2 LINE L2 2175 2485 -829 215 146 24 0 chr5 136031474 136031515 -67054017 + L2 LINE L2 2489 2530 -784 196 259 0 62 chr5 136031621 136031702 -67053830 + L2 LINE L2 2941 3016 -297 1455 250 143 16 chr5 136031716 136032200 -67053332 + MLT1E2 LTR MaLR 13 557 -69 388 278 157 43 chr5 136032334 136032589 -67052943 + L2 LINE L2 3008 3291 -22 429 354 190 12 chr5 136033185 136033516 -67052016 - HAL1 LINE L1 -574 1933 1544 295 307 129 36 chr5 136033711 136034206 -67051326 - HAL1b LINE L1 -696 652 112 968 161 129 16 chr5 136034325 136034511 -67051021 + MER6B DNA MER2_type 3 209 -1 204 158 0 0 chr5 136035069 136035107 -67050425 + (TA)n Simple_repeat Simple_repeat 2 39 0 192 152 0 0 chr5 136035290 136035323 -67050209 + T-rich Low_complexity Low_complexity 1 33 0 697 186 73 0 chr5 136035826 136035950 -67049582 + FLAM_A SINE Alu 1 133 0 2137 89 38 3 chr5 136036057 136036349 -67049183 + AluY SINE Alu 1 302 -9 1380 233 78 27 chr5 136036482 136037156 -67048376 - L1MEc LINE L1 -5603 793 44 1493 115 5 5 chr5 136037307 136037516 -67048016 - AluSx SINE Alu -72 240 32 394 135 42 94 chr5 136037521 136037617 -67047915 + L2 LINE L2 3222 3312 -1 2187 122 0 0 chr5 136037828 136038122 -67047410 - AluSg SINE Alu -16 294 1 22 56 0 0 chr5 136038959 136038995 -67046537 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 136039915 136039939 -67045593 + AT_rich Low_complexity Low_complexity 1 24 0 420 257 114 0 chr5 136042840 136042945 -67042587 + MER5A DNA MER1_type 67 183 -6 292 262 95 48 chr5 136042841 136042967 -67042565 - MER5A DNA MER1_type -56 133 2 * 2241 112 3 13 chr5 136043119 136043432 -67042100 - AluSq SINE Alu -1 312 3 363 107 0 0 chr5 136043654 136043710 -67041822 - MLT1D LTR MaLR 0 505 450 2107 129 0 3 chr5 136043727 136044013 -67041519 - AluSx SINE Alu -27 285 1 446 163 179 65 chr5 136044036 136044220 -67041312 - MLT1D LTR MaLR -139 366 162 931 175 6 6 chr5 136044282 136044453 -67041079 - MLT1D LTR MaLR -333 172 2 255 277 40 79 chr5 136044784 136044885 -67040647 + L2 LINE L2 3169 3265 -7 319 270 91 52 chr5 136046305 136046535 -67038997 + L2 LINE L2 1604 1842 -1472 689 211 141 17 chr5 136046658 136046968 -67038564 - MLT1E3 LTR MaLR -170 454 39 341 271 215 6 chr5 136046974 136047151 -67038381 + L2 LINE L2 2131 2344 -970 249 263 56 56 chr5 136047260 136047420 -67038112 - MLT1J LTR MaLR -106 405 246 596 248 136 5 chr5 136047651 136047857 -67037675 - MLT1J LTR MaLR -11 500 268 2271 176 107 7 chr5 136048089 136048548 -67036984 - MLT1D LTR MaLR 0 505 1 184 309 18 0 chr5 136051603 136051658 -67033874 - L3b LINE CR1 -4 1579 1524 382 378 7 0 chr5 136051829 136051964 -67033568 - MIR3 SINE MIR -59 149 14 280 257 94 64 chr5 136053633 136053835 -67031697 - MLT1L LTR MaLR -223 392 185 2636 58 0 0 chr5 136054126 136054437 -67031095 + AluY SINE Alu 1 311 0 34 0 0 0 chr5 136054495 136054529 -67031003 + AT_rich Low_complexity Low_complexity 1 34 0 1416 153 141 0 chr5 136055063 136055376 -67030156 + MER46B DNA MER2_type 1 232 -4 227 306 116 24 chr5 136055731 136056103 -67029429 + HAL1 LINE L1 847 1252 -1255 348 127 0 0 chr5 136056191 136056246 -67029286 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2205 140 0 0 chr5 136056249 136056557 -67028975 - AluSx SINE Alu -4 308 1 23 54 0 0 chr5 136057357 136057394 -67028138 + AT_rich Low_complexity Low_complexity 1 37 0 380 56 0 0 chr5 136057432 136057486 -67028046 - L1MA3 LINE L1 0 6305 6252 3894 232 65 38 chr5 136057794 136059308 -67026224 - L1MDa LINE L1 -4643 1897 193 240 186 0 0 chr5 136059327 136059370 -67026162 - MSTD LTR MaLR 0 396 354 276 30 0 0 chr5 136059528 136059561 -67025971 + (CA)n Simple_repeat Simple_repeat 2 34 0 6496 221 20 41 chr5 136059564 136061407 -67024125 - L1M3 LINE L1 -401 5782 3902 2379 91 0 7 chr5 136061407 136061703 -67023829 - AluSq SINE Alu -19 294 1 6496 221 20 41 chr5 136061703 136061875 -67023657 - L1M3 LINE L1 -2281 3902 3728 971 135 0 0 chr5 136061875 136062008 -67023524 - FLAM_C SINE Alu -10 133 1 6496 221 20 41 chr5 136062008 136062364 -67023168 - L1M3 LINE L1 -2455 3728 3424 354 205 60 0 chr5 136062427 136062510 -67023022 - L1M3 LINE L1 -2960 3186 3099 32 43 0 0 chr5 136062517 136062563 -67022969 + AT_rich Low_complexity Low_complexity 1 46 0 764 165 0 0 chr5 136062569 136062684 -67022848 - FLAM_C SINE Alu -18 115 1 855 128 20 7 chr5 136062885 136063033 -67022499 - LTR9 LTR ERV1 0 612 463 2142 123 0 0 chr5 136066101 136066386 -67019146 + AluSx SINE Alu 1 285 -27 180 0 0 0 chr5 136066386 136066406 -67019126 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2347 79 6 19 chr5 136067110 136067425 -67018107 + AluSq SINE Alu 1 311 -2 824 204 37 16 chr5 136067425 136067616 -67017916 + MER20 DNA MER1_type 1 195 -24 23 33 0 0 chr5 136067654 136067684 -67017848 + AT_rich Low_complexity Low_complexity 1 30 0 368 232 99 47 chr5 136067786 136068019 -67017513 - L1MC5 LINE L1 -36 7925 7681 259 228 38 0 chr5 136068024 136068103 -67017429 - L1MC/D LINE L1 -2000 5808 5727 648 58 0 0 chr5 136069420 136069507 -67016025 - L1PA6 LINE L1 -2 6152 6066 916 241 28 5 chr5 136069507 136069723 -67015809 - MER58A DNA MER1_type -2 222 2 403 318 60 16 chr5 136069771 136070011 -67015521 + MIR SINE MIR 14 262 0 197 306 16 0 chr5 136070297 136070359 -67015173 - L2 LINE L2 0 3272 3210 345 277 101 16 chr5 136070635 136070984 -67014548 + Charlie7 DNA MER1_type 22 434 -2178 1435 236 102 37 chr5 136071066 136071259 -67014273 + Charlie7 DNA MER1_type 1727 1906 -706 1807 109 35 8 chr5 136071259 136071516 -67014016 + AluSx SINE Alu 39 302 -10 1435 236 102 37 chr5 136071516 136072084 -67013448 + Charlie7 DNA MER1_type 1906 2538 -74 26 82 0 0 chr5 136072265 136072326 -67013206 + AT_rich Low_complexity Low_complexity 1 61 0 2337 76 0 0 chr5 136073628 136073917 -67011615 - AluY SINE Alu -22 289 1 1945 162 60 25 chr5 136074072 136074604 -67010928 - MLT2A2 LTR ERVL -7 547 1 25631 88 25 2 chr5 136074604 136078219 -67007313 - HERVL-A2 LTR ERVL 0 5654 1959 367 323 112 23 chr5 136078659 136079075 -67006457 + L1MC/D LINE L1 5137 5592 -816 23 54 0 0 chr5 136083340 136083377 -67002155 + AT_rich Low_complexity Low_complexity 1 37 0 457 247 0 25 chr5 136084565 136084727 -67000805 - L1MB8 LINE L1 -2 6176 6019 1015 111 0 0 chr5 136084802 136084968 -67000564 - AluSg/x SINE Alu 0 310 153 22 35 0 0 chr5 136085947 136085976 -66999556 + AT_rich Low_complexity Low_complexity 1 29 0 1132 183 0 19 chr5 136086752 136086965 -66998567 - AluJo SINE Alu -16 296 88 368 261 52 9 chr5 136088592 136088707 -66996825 + MIR SINE MIR 95 214 -48 284 369 59 30 chr5 136088751 136088987 -66996545 - L3 LINE CR1 -33 1544 1302 243 169 46 31 chr5 136089013 136089078 -66996454 - L2 LINE L2 -60 3212 3147 1268 284 114 96 chr5 136089234 136090381 -66995151 - L2 LINE L2 -876 2438 1257 955 167 59 43 chr5 136090381 136090567 -66994965 + MER5A DNA MER1_type 1 189 0 1268 284 114 96 chr5 136090567 136090892 -66994640 - L2 LINE L2 -2057 1257 939 22 0 0 0 chr5 136091497 136091519 -66994013 + AT_rich Low_complexity Low_complexity 1 22 0 228 222 0 86 chr5 136092771 136092852 -66992680 - MLT1L LTR MaLR -523 92 19 210 91 0 0 chr5 136094029 136094062 -66991470 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1927 147 18 0 chr5 136094064 136094343 -66991189 - AluSx SINE Alu -28 284 1 2048 133 0 13 chr5 136094591 136094907 -66990625 - AluSx SINE Alu 0 312 1 207 0 0 0 chr5 136094910 136094933 -66990599 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 56 0 0 chr5 136095089 136095125 -66990407 + AT_rich Low_complexity Low_complexity 1 36 0 208 220 17 51 chr5 136095177 136095236 -66990296 + L2 LINE L2 3216 3272 0 321 218 64 0 chr5 136095297 136095375 -66990157 + L1MEd LINE L1 918 1000 -5119 367 336 46 106 chr5 136095707 136095990 -66989542 + L2 LINE L2 3007 3272 0 2357 76 0 7 chr5 136096444 136096746 -66988786 - AluY SINE Alu -11 300 1 264 59 0 0 chr5 136097186 136097220 -66988312 + (TG)n Simple_repeat Simple_repeat 2 35 0 200 217 0 0 chr5 136101299 136101345 -66984187 + T-rich Low_complexity Low_complexity 1 46 0 239 231 0 0 chr5 136101377 136101429 -66984103 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 187 265 41 0 chr5 136101582 136101631 -66983901 + L2 LINE L2 3221 3271 -1 198 0 0 0 chr5 136102196 136102218 -66983314 + (AGGGGG)n Simple_repeat Simple_repeat 6 27 0 207 0 0 0 chr5 136102601 136102624 -66982908 + (CA)n Simple_repeat Simple_repeat 2 24 0 419 330 34 0 chr5 136102728 136102846 -66982686 + L2 LINE L2 3150 3271 -1 407 318 31 20 chr5 136103515 136103710 -66981822 - MIR3 SINE MIR -11 197 1 2348 34 0 0 chr5 136105522 136105785 -66979747 + AluY SINE Alu 27 289 -22 314 340 27 27 chr5 136105984 136106131 -66979401 - MIR SINE MIR -46 216 70 468 269 272 6 chr5 136107451 136107775 -66977757 + L2 LINE L2 1874 2283 -1031 187 341 205 10 chr5 136107793 136107998 -66977534 + L2 LINE L2 2815 3059 -213 391 265 109 43 chr5 136108437 136108648 -66976884 + L2 LINE L2 2929 3153 -160 578 257 13 47 chr5 136109092 136109284 -66976248 - MIR SINE MIR -31 231 44 887 300 140 20 chr5 136109305 136109918 -66975614 + L2 LINE L2 2275 2961 -353 261 83 0 0 chr5 136110788 136110824 -66974708 + (T)n Simple_repeat Simple_repeat 1 36 0 207 255 0 0 chr5 136112410 136112461 -66973071 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 136112485 136112507 -66973025 + AT_rich Low_complexity Low_complexity 1 22 0 2297 92 3 3 chr5 136113438 136113732 -66971800 - AluSg1 SINE Alu -15 294 1 32 43 0 0 chr5 136113761 136113807 -66971725 + AT_rich Low_complexity Low_complexity 1 46 0 391 254 95 43 chr5 136113896 136114128 -66971404 - L1MC4a LINE L1 -1824 5984 5741 270 333 81 0 chr5 136114148 136114259 -66971273 - MER91C DNA MER1_type 0 140 21 220 211 0 19 chr5 136114311 136114363 -66971169 + GA-rich Low_complexity Low_complexity 5 55 0 492 224 0 0 chr5 136114691 136114776 -66970756 + MER117 DNA MER1_type 3 87 -110 2062 182 80 24 chr5 136114777 136115019 -66970513 + L1MB3 LINE L1 5451 5678 -505 2779 94 5 24 chr5 136115019 136115401 -66970131 + THE1C LTR MaLR 1 375 0 2062 182 80 24 chr5 136115401 136115830 -66969702 + L1MB3 LINE L1 5678 6183 0 189 175 25 25 chr5 136115971 136116011 -66969521 - MER5A DNA MER1_type 0 189 150 233 321 112 22 chr5 136116943 136117077 -66968455 - MIR SINE MIR -13 249 104 395 279 83 29 chr5 136117081 136117285 -66968247 - MIR SINE MIR 0 262 48 1651 153 0 52 chr5 136117323 136117610 -66967922 - AluJb SINE Alu -23 289 18 867 300 139 16 chr5 136117747 136118318 -66967214 + L2 LINE L2 2618 3254 -59 831 174 168 6 chr5 136118677 136118838 -66966694 + MER5A DNA MER1_type 1 187 -2 467 294 109 47 chr5 136119251 136119591 -66965941 - L2 LINE L2 -90 3223 2863 664 238 117 39 chr5 136119657 136119964 -66965568 - L2 LINE L2 -597 2717 2387 2353 144 28 17 chr5 136120716 136121076 -66964456 + THE1B LTR MaLR 1 364 0 309 288 89 78 chr5 136121076 136121267 -66964265 - L2 LINE L2 -3 3269 3077 2377 81 0 0 chr5 136121835 136122130 -66963402 - AluSg SINE Alu -15 295 1 416 239 115 0 chr5 136123619 136123749 -66961783 - L1ME4a LINE L1 -295 5826 5682 556 271 59 20 chr5 136123770 136123973 -66961559 - MLT1K LTR MaLR -4 584 374 641 298 123 49 chr5 136124739 136125356 -66960176 + L2 LINE L2 2641 3304 -9 2014 160 13 0 chr5 136125617 136125929 -66959603 - 7SLRNA srpRNA srpRNA -4 316 1 1698 142 71 8 chr5 136125979 136126247 -66959285 - AluJo SINE Alu -27 285 1 275 0 29 0 chr5 136126948 136126983 -66958549 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr5 136127254 136127274 -66958258 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 2135 148 87 0 chr5 136128286 136128643 -66956889 - L1MB2 LINE L1 -2 6169 5782 291 303 216 9 chr5 136129573 136129745 -66955787 - MIR SINE MIR -48 214 11 1294 88 0 0 chr5 136130059 136130218 -66955314 + AluY SINE Alu 1 159 -152 285 303 18 9 chr5 136130643 136130752 -66954780 + L1MC/D LINE L1 5715 5824 -1984 2451 106 3 0 chr5 136131098 136131428 -66954104 - MLT2A2 LTR ERVL 0 453 123 513 235 0 0 chr5 136134129 136134261 -66951271 + T-rich Low_complexity Low_complexity 1 132 0 2106 119 0 46 chr5 136134615 136134942 -66950590 - AluSx SINE Alu 0 312 1 183 42 0 0 chr5 136135011 136135035 -66950497 + (A)n Simple_repeat Simple_repeat 1 24 0 2325 133 11 3 chr5 136135254 136135608 -66949924 + MSTA-int LTR MaLR 1295 1651 0 2280 143 122 10 chr5 136135609 136135993 -66949539 + MSTA LTR MaLR 2 428 0 299 119 0 17 chr5 136136127 136136186 -66949346 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 893 310 102 50 chr5 136137061 136137639 -66947893 + L2 LINE L2 2148 2755 -559 340 167 4 2 chr5 136137652 136137715 -66947817 - MLT1D LTR MaLR -25 470 303 387 219 98 77 chr5 136137828 136138011 -66947521 - L1MEc LINE L1 -3623 2506 2320 819 273 87 13 chr5 136138259 136138748 -66946784 - L1MEc LINE L1 -4580 1730 1169 2156 109 6 31 chr5 136138791 136139111 -66946421 - AluSx SINE Alu 0 312 1 2211 85 3 0 chr5 136139250 136139660 -66945872 + AluY SINE Alu 1 411 0 3214 138 6 4 chr5 136139660 136139848 -66945684 + L1P4 LINE L1 5310 5496 -665 2096 137 0 0 chr5 136139848 136140148 -66945384 + AluSx SINE Alu 1 300 -12 3214 138 6 4 chr5 136140148 136140450 -66945082 + L1P4 LINE L1 5496 5801 -360 368 305 61 69 chr5 136140575 136140784 -66944748 - L1 LINE L1 -1526 4620 4411 2174 106 0 0 chr5 136140784 136141066 -66944466 + AluSg SINE Alu 1 282 -28 368 305 61 69 chr5 136141066 136141610 -66943922 - L1 LINE L1 -1735 4411 3873 489 302 70 0 chr5 136142441 136142613 -66942919 - L2 LINE L2 -6 3307 3124 370 287 20 0 chr5 136142671 136142772 -66942760 - MER5A DNA MER1_type -83 106 4 695 226 71 18 chr5 136142903 136143071 -66942461 - MER45A DNA AcHobo -1 177 1 427 101 16 0 chr5 136143482 136143550 -66941982 - L1PA10 LINE L1 -213 5955 5887 2484 207 4 0 chr5 136143718 136144201 -66941331 - L1P LINE L1 -901 5245 4761 407 275 147 46 chr5 136144679 136145006 -66940526 - MLT1H LTR MaLR -189 360 1 227 381 42 8 chr5 136145170 136145288 -66940244 + L2 LINE L2 2616 2737 -577 1332 159 0 14 chr5 136145809 136146029 -66939503 - AluJb SINE Alu -1 311 95 181 271 0 0 chr5 136146568 136146616 -66938916 - L2 LINE L2 -15 3298 3251 512 319 118 56 chr5 136146628 136147146 -66938386 + L2 LINE L2 2163 2712 -602 473 291 109 9 chr5 136147284 136147514 -66938018 + L3 LINE CR1 635 887 -690 316 271 114 36 chr5 136147517 136147657 -66937875 - L2 LINE L2 0 3313 3163 703 298 167 11 chr5 136147850 136148450 -66937082 - L2 LINE L2 -2 3311 2624 2356 67 3 13 chr5 136149807 136150106 -66935426 - AluSx SINE Alu -16 296 1 358 336 72 0 chr5 136150290 136150415 -66935117 + MER5B DNA MER1_type 15 148 -30 412 234 56 9 chr5 136150500 136150607 -66934925 + MER5B DNA MER1_type 1 112 -66 1185 223 14 27 chr5 136150852 136151148 -66934384 - L1MB7 LINE L1 -7 6177 5886 350 301 7 41 chr5 136151220 136151366 -66934166 + MIR SINE MIR 122 262 0 189 0 0 0 chr5 136151977 136151998 -66933534 + (T)n Simple_repeat Simple_repeat 1 21 0 203 248 10 50 chr5 136152169 136152270 -66933262 + L2 LINE L2 3108 3204 -109 289 202 61 20 chr5 136152371 136152470 -66933062 + L1MC5 LINE L1 7811 7913 -48 272 286 49 38 chr5 136152619 136152804 -66932728 - Charlie7 DNA MER1_type -5 2607 2421 1020 271 165 39 chr5 136152805 136153287 -66932245 - Charlie7 DNA MER1_type -1897 715 143 2044 159 0 0 chr5 136153287 136153588 -66931944 + AluJb SINE Alu 3 303 -9 1020 271 165 39 chr5 136153588 136153700 -66931832 - Charlie7 DNA MER1_type -2469 143 46 22 0 0 0 chr5 136154241 136154263 -66931269 + AT_rich Low_complexity Low_complexity 1 22 0 237 353 44 15 chr5 136154520 136154656 -66930876 - L2 LINE L2 -466 2848 2709 455 256 214 15 chr5 136154809 136155075 -66930457 - L2 LINE L2 0 3313 2995 391 211 53 66 chr5 136155511 136155663 -66929869 + MER5A DNA MER1_type 18 167 -22 342 295 49 8 chr5 136156296 136156418 -66929114 + MIR SINE MIR 31 157 -105 241 167 12 24 chr5 136157945 136158029 -66927503 + GA-rich Low_complexity Low_complexity 2 84 0 939 217 82 5 chr5 136159297 136159504 -66926028 + MER58A DNA MER1_type 1 223 -1 312 316 99 12 chr5 136159671 136159842 -66925690 - L2 LINE L2 -17 3296 3111 428 263 35 9 chr5 136159892 136160006 -66925526 + L2 LINE L2 3136 3252 -20 192 77 0 0 chr5 136160007 136160033 -66925499 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 292 285 102 43 chr5 136160250 136160436 -66925096 - L2 LINE L2 -491 2823 2627 1251 163 124 19 chr5 136160503 136160761 -66924771 + MSTA LTR MaLR 1 285 -143 1214 277 64 37 chr5 136161351 136161672 -66923860 + LTR16C LTR ERVL 43 381 -110 1255 241 158 22 chr5 136161672 136162116 -66923416 - MLT1D LTR MaLR -1 504 1 1214 277 64 37 chr5 136162116 136162231 -66923301 + LTR16C LTR ERVL 381 491 0 225 366 0 0 chr5 136162924 136163017 -66922515 - MIR SINE MIR -117 145 53 276 301 0 0 chr5 136163576 136163649 -66921883 + (TATG)n Simple_repeat Simple_repeat 2 74 0 2803 241 58 3 chr5 136163649 136164267 -66921265 - MER82 DNA MER2_type -1 652 1 234 276 17 0 chr5 136164271 136164329 -66921203 - MER47A DNA MER2_type 0 366 308 979 226 51 51 chr5 136164482 136164756 -66920776 - MER47A DNA MER2_type -92 274 1 219 185 46 31 chr5 136165268 136165333 -66920199 - L2 LINE L2 -60 3212 3147 864 289 142 59 chr5 136165589 136166237 -66919295 - L2 LINE L2 -954 2360 1767 354 107 0 0 chr5 136166237 136166293 -66919239 + (TGGA)n Simple_repeat Simple_repeat 4 59 0 864 289 142 59 chr5 136166293 136166638 -66918894 - L2 LINE L2 -1547 1767 1269 866 172 59 43 chr5 136166638 136166824 -66918708 + MER5A DNA MER1_type 1 189 0 864 289 142 59 chr5 136166824 136166898 -66918634 - L2 LINE L2 -2045 1269 1203 319 261 0 78 chr5 136167199 136167341 -66918191 + L3 LINE CR1 840 970 -607 248 95 0 0 chr5 136167429 136167471 -66918061 + MADE1 DNA Mariner 2 43 -37 243 321 22 43 chr5 136167605 136167789 -66917743 + L3 LINE CR1 1107 1286 -291 1487 121 0 0 chr5 136168245 136168443 -66917089 + AluSg SINE Alu 5 202 -108 453 204 41 48 chr5 136168661 136168808 -66916724 - MER5B DNA MER1_type 0 178 33 625 96 0 29 chr5 136168812 136168916 -66916616 + MER53 DNA DNA 89 189 0 541 317 107 62 chr5 136168919 136169386 -66916146 + L2 LINE L2 2474 2961 -353 3335 140 19 37 chr5 136170842 136171434 -66914098 + L1MC1 LINE L1 5748 6328 -5 249 33 0 0 chr5 136171504 136171534 -66913998 + (CA)n Simple_repeat Simple_repeat 2 31 0 226 294 122 82 chr5 136171569 136171947 -66913585 + L2 LINE L2 2871 3263 -9 330 171 132 93 chr5 136171989 136172118 -66913414 + MIR SINE MIR 73 206 -56 213 250 15 15 chr5 136172365 136172433 -66913099 + L2 LINE L2 2921 2988 -325 192 371 0 0 chr5 136172533 136172603 -66912929 - L2 LINE L2 -9 3304 3235 561 252 31 49 chr5 136172733 136172959 -66912573 - L2 LINE L2 0 3313 3092 688 253 149 0 chr5 136173207 136173401 -66912131 - MER58A DNA MER1_type 0 224 2 347 326 42 46 chr5 136173712 136173951 -66911581 - LTR16C LTR ERVL -2 489 252 1825 264 123 16 chr5 136174344 136175277 -66910255 - L1M4 LINE L1 -2389 3757 2725 790 156 39 0 chr5 136176969 136177097 -66908435 + Tigger1 DNA MER2_type 2286 2418 0 364 227 80 40 chr5 136177100 136177250 -66908282 + L1MC4a LINE L1 5812 5967 -1841 2891 13 0 0 chr5 136177310 136177621 -66907911 - AluY SINE Alu 0 311 1 5357 201 33 12 chr5 136178582 136179618 -66905914 - MSTA-int LTR MaLR -593 1058 1 328 128 0 0 chr5 136179618 136179665 -66905867 - MSTA LTR MaLR 0 428 382 2210 142 11 31 chr5 136179669 136180050 -66905482 + THE1C LTR MaLR 1 373 -2 6448 114 44 59 chr5 136180052 136181116 -66904416 + THE1C-int LTR MaLR 1 1048 -532 411 21 0 0 chr5 136181849 136181897 -66903635 + (CA)n Simple_repeat Simple_repeat 2 49 0 222 300 29 0 chr5 136183418 136183488 -66902044 + L2 LINE L2 3201 3272 0 287 232 179 0 chr5 136183523 136183618 -66901914 + MIR SINE MIR 20 131 -131 497 307 37 55 chr5 136184211 136184429 -66901103 + MIR SINE MIR 8 221 -41 420 20 0 0 chr5 136184910 136184959 -66900573 + (CA)n Simple_repeat Simple_repeat 2 50 0 1548 166 0 86 chr5 136184970 136185283 -66900249 - AluJo SINE Alu -26 286 1 374 298 107 19 chr5 136187022 136187227 -66898305 - MIR SINE MIR -4 258 36 555 299 68 9 chr5 136187428 136187649 -66897883 - LTR33 LTR ERVL -32 489 256 525 211 110 3 chr5 136187912 136188058 -66897474 + L1MB8 LINE L1 5760 5923 -255 417 313 90 59 chr5 136188354 136188776 -66896756 + L2 LINE L2 2817 3251 -21 2015 128 10 10 chr5 136188784 136189081 -66896451 - AluSq SINE Alu -16 297 1 180 0 0 0 chr5 136189837 136189857 -66895675 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 204 245 0 0 chr5 136189871 136189920 -66895612 + A-rich Low_complexity Low_complexity 1 49 0 231 282 45 58 chr5 136190303 136190459 -66895073 + L2 LINE L2 2925 3078 -194 1338 221 19 15 chr5 136190863 136191130 -66894402 - Tigger7 DNA MER2_type -465 268 1 1813 236 52 7 chr5 136191136 136191678 -66893854 - L1M4 LINE L1 -1694 4452 3887 322 185 77 100 chr5 136191846 136191976 -66893556 - L1M4 LINE L1 -2256 3890 3764 801 243 86 0 chr5 136192005 136192215 -66893317 + MIR SINE MIR 7 234 -28 1876 183 22 14 chr5 136193173 136193533 -66891999 - MLT1A1 LTR MaLR -2 363 1 194 225 0 14 chr5 136193602 136193673 -66891859 + (TG)n Simple_repeat Simple_repeat 1 70 0 210 311 68 14 chr5 136194570 136194718 -66890814 + MIR SINE MIR 69 224 -38 501 278 146 23 chr5 136195305 136195728 -66889804 + L1ME LINE L1 5335 5805 -316 237 119 0 0 chr5 136195863 136195905 -66889627 + (TG)n Simple_repeat Simple_repeat 1 42 0 3147 188 55 65 chr5 136196436 136196517 -66889015 - MER63C DNA MER1_type -149 911 831 1897 169 0 3 chr5 136196517 136196818 -66888714 + AluSq SINE Alu 1 300 -13 3147 188 55 65 chr5 136196818 136197501 -66888031 - MER63C DNA MER1_type -229 831 155 992 114 0 7 chr5 136197601 136197750 -66887782 + MER41B LTR ERV1 488 635 0 531 185 0 0 chr5 136197844 136197950 -66887582 + MER5A DNA MER1_type 4 109 -80 279 290 39 15 chr5 136198964 136199139 -66886393 + MIR SINE MIR 20 201 -61 206 326 0 22 chr5 136199175 136199264 -66886268 - L3 LINE CR1 -223 1354 1268 2001 126 0 18 chr5 136199535 136199852 -66885680 - AluSx SINE Alu 0 314 3 21 0 0 0 chr5 136200193 136200214 -66885318 + AT_rich Low_complexity Low_complexity 1 21 0 1096 283 58 8 chr5 136200353 136200717 -66884815 + MLT1F LTR MaLR 1 382 -160 467 189 18 36 chr5 136201831 136201942 -66883590 + MER117 DNA MER1_type 54 162 -35 271 346 19 10 chr5 136202008 136202112 -66883420 + MIR SINE MIR 84 188 -74 750 194 124 40 chr5 136202240 136202441 -66883091 - MER20 DNA MER1_type -1 218 1 297 264 71 52 chr5 136202449 136202604 -66882928 - MER5B DNA MER1_type 0 178 21 195 386 31 24 chr5 136203377 136203504 -66882028 - L2 LINE L2 -2 3270 3143 245 306 31 20 chr5 136203748 136203846 -66881686 - MIR SINE MIR -50 212 114 1985 150 20 0 chr5 136204692 136204985 -66880547 - AluJb SINE Alu -9 303 5 185 292 21 73 chr5 136205123 136205219 -66880313 - L2 LINE L2 0 3272 3182 738 294 9 13 chr5 136205295 136205523 -66880009 - MIR SINE MIR -21 241 15 225 238 95 16 chr5 136205974 136206037 -66879495 - MIR SINE MIR -187 75 8 602 283 155 30 chr5 136206745 136207172 -66878360 + L2 LINE L2 2831 3310 -3 377 335 16 16 chr5 136207286 136207474 -66878058 + MIR SINE MIR 23 210 -52 1985 185 7 34 chr5 136207655 136208072 -66877460 - L1MA9 LINE L1 -37 6275 5870 662 240 6 8 chr5 136208070 136208243 -66877289 + L1M4 LINE L1 5633 5802 -382 * 414 213 0 0 chr5 136208243 136208337 -66877195 + (TATG)n Simple_repeat Simple_repeat 4 97 0 650 212 125 101 chr5 136208443 136208811 -66876721 - LTR37B LTR ERV1 -85 383 7 2072 124 0 14 chr5 136208838 136209128 -66876404 - AluSx SINE Alu -26 286 1 304 216 14 14 chr5 136209297 136209371 -66876161 - MIR SINE MIR -88 174 101 528 267 51 6 chr5 136209668 136209844 -66875688 + MIR SINE MIR 2 185 -77 1246 274 78 12 chr5 136209985 136210397 -66875135 - LTR16C LTR ERVL -1 490 52 2463 135 3 3 chr5 136210465 136210829 -66874703 + THE1B LTR MaLR 1 364 0 391 274 24 0 chr5 136211747 136211871 -66873661 - MIR SINE MIR -55 207 81 345 97 42 0 chr5 136211907 136211979 -66873553 + (TGGA)n Simple_repeat Simple_repeat 3 77 0 200 333 27 0 chr5 136212301 136212376 -66873156 + GA-rich Low_complexity Low_complexity 2 78 0 241 271 169 8 chr5 136213605 136213723 -66871809 - MIR SINE MIR 0 262 126 243 301 161 0 chr5 136213799 136213892 -66871640 - MIR SINE MIR -65 143 36 331 286 57 46 chr5 136213951 136214126 -66871406 - MIR SINE MIR -35 227 51 279 0 0 0 chr5 136215030 136215061 -66870471 + (CTG)n Simple_repeat Simple_repeat 1 31 0 204 135 0 0 chr5 136215329 136215366 -66870166 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 220 243 40 14 chr5 136217232 136217306 -66868226 - MIR SINE MIR -30 232 157 733 262 104 49 chr5 136218122 136218450 -66867082 + LTR16C LTR ERVL 144 489 -2 204 135 0 0 chr5 136219119 136219156 -66866376 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 316 330 0 0 chr5 136219291 136219385 -66866147 - L3 LINE CR1 -783 794 701 1169 181 4 82 chr5 136219482 136219725 -66865807 + MER58A DNA MER1_type 1 224 0 938 136 123 31 chr5 136219725 136219887 -66865645 - MSTA LTR MaLR -2 426 250 428 73 0 0 chr5 136219882 136219937 -66865595 - MSTA LTR MaLR -373 55 1 * 267 329 118 6 chr5 136219970 136220140 -66865392 - L3 LINE CR1 -1078 499 311 264 228 149 18 chr5 136220454 136220568 -66864964 - MIR SINE MIR -1 261 133 5255 137 45 9 chr5 136220627 136221546 -66863986 - L1MA8 LINE L1 -4 6287 5336 4610 153 35 25 chr5 136221538 136222342 -66863190 + L1 LINE L1 4107 4922 -1224 * 1943 127 68 3 chr5 136222342 136222634 -66862898 + AluSp SINE Alu 1 311 -2 4610 153 35 25 chr5 136222634 136222725 -66862807 + L1 LINE L1 4922 5011 -1135 1000 81 0 0 chr5 136222729 136222852 -66862680 + AluSg1 SINE Alu 1 123 -186 1341 199 49 10 chr5 136222865 136223172 -66862360 + L1 LINE L1 5030 5348 -798 741 256 46 64 chr5 136223195 136223523 -66862009 - L2 LINE L2 -33 3280 2959 198 0 0 0 chr5 136223663 136223685 -66861847 + (T)n Simple_repeat Simple_repeat 1 22 0 354 228 99 50 chr5 136224463 136224564 -66860968 + L2 LINE L2 3150 3255 -17 2191 126 0 0 chr5 136225337 136225638 -66859894 - AluSx SINE Alu -9 303 3 692 285 127 34 chr5 136225815 136226233 -66859299 - LTR16A1 LTR ERVL 0 457 1 294 233 14 0 chr5 136226233 136226306 -66859226 - MIR SINE MIR -66 196 123 2451 233 53 22 chr5 136226359 136227096 -66858436 + L1M4 LINE L1 3558 4317 -1829 480 313 73 10 chr5 136227235 136227427 -66858105 - LTR16A1 LTR ERVL -64 393 190 216 337 11 0 chr5 136227621 136227713 -66857819 - MIR SINE MIR -139 123 31 245 225 11 67 chr5 136228588 136228677 -66856855 - MLT1J2 LTR MaLR 0 450 367 231 320 68 14 chr5 136228712 136228859 -66856673 - MLT1I LTR MaLR -175 234 80 631 237 81 0 chr5 136228999 136229172 -66856360 - MER3 DNA MER1_type -1 208 22 212 250 0 0 chr5 136229284 136229332 -66856200 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 234 320 78 8 chr5 136230173 136230301 -66855231 + L3 LINE CR1 1370 1506 -71 329 269 28 28 chr5 136230367 136230475 -66855057 + MER117 DNA MER1_type 89 196 -1 226 291 0 0 chr5 136230792 136230847 -66854685 - L2 LINE L2 -18 3254 3200 665 251 54 15 chr5 136231598 136231801 -66853731 + MIR SINE MIR 4 214 -48 1187 188 3 66 chr5 136234132 136234436 -66851096 + MER33 DNA MER1_type 20 304 -20 255 198 11 22 chr5 136234881 136234972 -66850560 + GA-rich Low_complexity Low_complexity 2 91 0 274 273 0 0 chr5 136234996 136235062 -66850470 - MIR SINE MIR -30 232 167 459 318 0 13 chr5 136235782 136235936 -66849596 + MER5A DNA MER1_type 38 189 0 1736 150 8 8 chr5 136237694 136237985 -66847547 + AluSx SINE Alu 17 307 0 1120 231 111 54 chr5 136238636 136239078 -66846454 + MLT1C LTR MaLR 1 467 0 2521 81 0 0 chr5 136239103 136239413 -66846119 + AluY SINE Alu 1 310 -1 1765 144 12 28 chr5 136239701 136240021 -66845511 - L1PA13 LINE L1 0 6163 5849 444 238 0 0 chr5 136291205 136291285 -66794247 + Tigger3(Golem) DNA MER2_type 1 80 -2949 27 0 0 0 chr5 136291382 136291409 -66794123 + AT_rich Low_complexity Low_complexity 1 27 0 239 108 0 0 chr5 136291409 136291446 -66794086 + Tigger3(Golem) DNA MER2_type 2918 2954 -75 444 222 0 0 chr5 136291460 136291541 -66793991 + Tigger3(Golem) DNA MER2_type 2 82 -2947 * 1279 97 62 31 chr5 136291539 136291798 -66793734 + Tigger3(Golem) DNA MER2_type 2226 2492 -537 2686 89 0 25 chr5 136291798 136292193 -66793339 - L1PA7 LINE L1 -1 6153 5769 21841 38 4 1 chr5 136292199 136295594 -66789938 - L1PA5 LINE L1 -3 6151 2747 375 310 25 15 chr5 136297293 136297490 -66788042 + L2 LINE L2 2991 3189 -124 361 298 88 11 chr5 136299235 136299416 -66786116 + MIR SINE MIR 53 247 -15 212 236 0 55 chr5 136301201 136301256 -66784276 + polypyrimidine Low_complexity Low_complexity 2 53 0 360 0 0 0 chr5 136301258 136301298 -66784234 + (TC)n Simple_repeat Simple_repeat 1 40 0 321 47 0 0 chr5 136301297 136301340 -66784192 + (CA)n Simple_repeat Simple_repeat 1 43 0 * 205 171 0 0 chr5 136302295 136302336 -66783196 + (CCG)n Simple_repeat Simple_repeat 1 41 0 186 118 0 0 chr5 136302411 136302445 -66783087 + (TCC)n Simple_repeat Simple_repeat 3 36 0 260 298 18 9 chr5 136302446 136302560 -66782972 + (CCG)n Simple_repeat Simple_repeat 2 116 0 206 205 0 0 chr5 136302607 136302646 -66782886 + (CGG)n Simple_repeat Simple_repeat 3 41 0 35 0 0 0 chr5 136302779 136302814 -66782718 + GC_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr5 136304724 136304760 -66780772 + AT_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr5 136306576 136306596 -66778936 + (TC)n Simple_repeat Simple_repeat 1 20 0 195 269 109 50 chr5 136309539 136309658 -66775874 + MIR SINE MIR 29 154 -108 213 139 0 0 chr5 136311420 136311463 -66774069 + (GA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr5 136311883 136311905 -66773627 + GC_rich Low_complexity Low_complexity 1 22 0 286 198 58 12 chr5 136313279 136313365 -66772167 - L2 LINE L2 0 3313 3224 24 53 0 0 chr5 136316516 136316554 -66768978 + AT_rich Low_complexity Low_complexity 1 38 0 25 31 0 0 chr5 136320642 136320674 -66764858 + AT_rich Low_complexity Low_complexity 1 32 0 1884 117 78 0 chr5 136322405 136322687 -66762845 - AluSq SINE Alu -9 304 1 2365 84 10 0 chr5 136322690 136322999 -66762533 - AluSp SINE Alu 0 313 2 22 0 0 0 chr5 136323188 136323210 -66762322 + AT_rich Low_complexity Low_complexity 1 22 0 773 164 0 26 chr5 136323210 136323362 -66762170 + L1MB2 LINE L1 6024 6171 0 257 315 0 22 chr5 136323438 136323527 -66762005 - MER5A DNA MER1_type -65 124 38 2314 76 30 0 chr5 136323552 136323854 -66761678 + AluY SINE Alu 1 311 0 216 0 0 0 chr5 136324916 136324940 -66760592 + (T)n Simple_repeat Simple_repeat 1 24 0 1119 177 68 23 chr5 136325136 136325402 -66760130 - L1MC2 LINE L1 -1 6343 6066 480 234 49 119 chr5 136325521 136325765 -66759767 - MIR SINE MIR -28 234 8 297 261 0 0 chr5 136326677 136326769 -66758763 - MER53 DNA DNA -90 99 8 483 261 142 9 chr5 136326844 136327062 -66758470 - L2 LINE L2 -422 2892 2646 224 277 23 39 chr5 136327078 136327208 -66758324 - L2 LINE L2 -1045 2269 2142 254 361 0 0 chr5 136327920 136327992 -66757540 + polypyrimidine Low_complexity Low_complexity 2 73 0 377 265 30 15 chr5 136330029 136330161 -66755371 - L2 LINE L2 0 3272 3139 183 80 0 0 chr5 136330933 136330958 -66754574 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 29 60 0 0 chr5 136332056 136332106 -66753426 + AT_rich Low_complexity Low_complexity 1 50 0 25 0 0 0 chr5 136332595 136332620 -66752912 + AT_rich Low_complexity Low_complexity 1 25 0 222 303 73 9 chr5 136332969 136333078 -66752454 + MIR SINE MIR 91 206 -56 963 187 0 0 chr5 136333495 136333661 -66751871 - FRAM SINE Alu 0 40 1 385 254 98 40 chr5 136333675 136333950 -66751582 - L1MC5 LINE L1 -172 7789 7499 240 349 8 30 chr5 136333987 136334003 -66751529 + MER5A DNA MER1_type 46 61 -128 2296 100 0 3 chr5 136334003 136334313 -66751219 + AluSg SINE Alu 1 309 -1 240 349 8 30 chr5 136334313 136334428 -66751104 + MER5A DNA MER1_type 61 185 -4 241 303 67 8 chr5 136334781 136334900 -66750632 - L1ME4a LINE L1 -35 6086 5961 307 328 88 0 chr5 136335131 136335323 -66750209 - L1ME4a LINE L1 -440 5681 5473 2220 118 0 0 chr5 136339162 136339458 -66746074 - AluSx SINE Alu -16 296 1 502 43 33 33 chr5 136339797 136339889 -66745643 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 7430 51 8 0 chr5 136339889 136341583 -66743949 - L1PA6 LINE L1 0 6154 4453 969 124 0 17 chr5 136342067 136342134 -66743398 + (TTCCC)n Simple_repeat Simple_repeat 1 240 0 969 124 0 17 chr5 136342134 136342312 -66743220 + (TTCCC)n Simple_repeat Simple_repeat 4 178 0 227 250 0 0 chr5 136342492 136342572 -66742960 + CT-rich Low_complexity Low_complexity 3 82 0 855 121 6 33 chr5 136342572 136342754 -66742778 + (TTCCC)n Simple_repeat Simple_repeat 2 178 0 203 292 11 0 chr5 136342759 136342848 -66742684 + CT-rich Low_complexity Low_complexity 4 93 0 2338 103 0 7 chr5 136343016 136343318 -66742214 - AluSp SINE Alu -13 300 1 1899 174 42 5 chr5 136343548 136343927 -66741605 + L1MA4 LINE L1 5908 6300 0 302 349 30 0 chr5 136343954 136344086 -66741446 - MIR SINE MIR -21 241 106 811 294 18 5 chr5 136344310 136344528 -66741004 + MIR SINE MIR 42 262 0 35 24 0 0 chr5 136345230 136345272 -66740260 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr5 136348388 136348412 -66737120 + AT_rich Low_complexity Low_complexity 1 24 0 599 277 91 41 chr5 136349355 136349597 -66735935 + MIR SINE MIR 9 262 0 217 250 44 100 chr5 136349793 136349953 -66735579 - MIR SINE MIR -111 151 1 2233 64 3 10 chr5 136349961 136350257 -66735275 + L1PA7 LINE L1 5861 6154 0 233 247 94 0 chr5 136350381 136350466 -66735066 - MER113 DNA MER1_type? -428 93 1 1881 110 90 34 chr5 136351330 136351685 -66733847 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 136353585 136353608 -66731924 + AT_rich Low_complexity Low_complexity 1 23 0 338 333 106 0 chr5 136353928 136354069 -66731463 - MIR SINE MIR -28 234 79 247 232 174 0 chr5 136354249 136354318 -66731214 - MIR SINE MIR -18 244 164 344 342 79 0 chr5 136354703 136354855 -66730677 - MIR3 SINE MIR -3 205 42 234 0 0 0 chr5 136355337 136355363 -66730169 + (A)n Simple_repeat Simple_repeat 1 26 0 180 77 0 0 chr5 136355369 136355395 -66730137 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 339 65 0 0 chr5 136355606 136355652 -66729880 + (TG)n Simple_repeat Simple_repeat 2 47 0 251 277 24 0 chr5 136357355 136357438 -66728094 + (TCCA)n Simple_repeat Simple_repeat 1 85 0 363 259 24 12 chr5 136357465 136357550 -66727982 - L2 LINE L2 -35 3237 3152 459 266 84 7 chr5 136357746 136357889 -66727643 + L2 LINE L2 3116 3269 -3 315 0 0 0 chr5 136359739 136359774 -66725758 + (GA)n Simple_repeat Simple_repeat 2 36 0 195 315 99 63 chr5 136362280 136362391 -66723141 - L2 LINE L2 -9 3304 3190 546 317 46 42 chr5 136362526 136362766 -66722766 - MIR SINE MIR -18 244 4 187 316 0 18 chr5 136363508 136363565 -66721967 - L2 LINE L2 -18 3254 3199 461 308 44 11 chr5 136363906 136364088 -66721444 + MIR3 SINE MIR 5 192 -16 356 243 128 88 chr5 136364658 136364957 -66720575 - MER102a DNA MER1_type -2 328 7 356 385 11 11 chr5 136365702 136365884 -66719648 - L2 LINE L2 -675 2639 2458 257 42 0 83 chr5 136366583 136366631 -66718901 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 248 53 26 0 chr5 136366946 136366984 -66718548 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 197 115 0 96 chr5 136367672 136367724 -66717808 + (T)n Simple_repeat Simple_repeat 1 47 0 182 270 36 117 chr5 136368741 136368852 -66716680 - MIR SINE MIR -87 121 20 300 341 32 24 chr5 136372340 136372463 -66713069 - L2 LINE L2 -10 3262 3139 1839 260 47 22 chr5 136373671 136374563 -66710969 - L2 LINE L2 0 3313 2405 421 329 113 29 chr5 136376713 136377023 -66708509 + L1MEd LINE L1 274 609 -5510 529 254 51 42 chr5 136377169 136377567 -66707965 + LTR16A LTR ERVL 7 450 0 676 299 167 8 chr5 136377570 136377971 -66707561 + L2 LINE L2 2230 2694 -620 245 180 20 0 chr5 136378214 136378264 -66707268 - L1MC/D LINE L1 -1893 5915 5865 255 293 9 52 chr5 136378264 136378380 -66707152 + L2 LINE L2 2687 2797 -517 240 257 0 99 chr5 136378858 136378959 -66706573 + HsTC2 DNA Tc2 1 91 -1807 528 278 15 0 chr5 136379037 136379170 -66706362 + L2 LINE L2 3138 3272 0 404 161 0 0 chr5 136379574 136379636 -66705896 - AluJ/FRAM SINE Alu -20 292 231 552 175 0 36 chr5 136379636 136379773 -66705759 - L1MA4A LINE L1 -181 6122 5991 2402 84 3 0 chr5 136379835 136380131 -66705401 - AluSp SINE Alu -16 297 1 351 263 26 0 chr5 136380631 136380745 -66704787 + (TA)n Simple_repeat Simple_repeat 1 117 0 341 307 0 10 chr5 136380880 136380981 -66704551 + MIR3 SINE MIR 61 160 -48 438 250 216 27 chr5 136380981 136381129 -66704403 - MER5B DNA MER1_type 0 178 3 216 316 202 10 chr5 136382013 136382206 -66703326 - MIR SINE MIR -10 252 23 520 307 7 7 chr5 136382226 136382376 -66703156 - MIR SINE MIR -105 157 8 2485 61 0 0 chr5 136385352 136385648 -66699884 + AluY SINE Alu 1 296 -15 1274 158 35 0 chr5 136386478 136386706 -66698826 - MER46A DNA MER2_type 0 236 1 22 35 0 0 chr5 136387163 136387192 -66698340 + AT_rich Low_complexity Low_complexity 1 29 0 699 215 6 0 chr5 136388525 136388683 -66696849 - MER3 DNA MER1_type -23 186 28 183 42 0 0 chr5 136388713 136388737 -66696795 + (A)n Simple_repeat Simple_repeat 1 24 0 2005 117 7 17 chr5 136388871 136389169 -66696363 + AluJb SINE Alu 1 295 -17 290 305 182 13 chr5 136390218 136390372 -66695160 - MIR3 SINE MIR -24 184 5 22 35 0 0 chr5 136390780 136390809 -66694723 + AT_rich Low_complexity Low_complexity 1 29 0 186 305 38 67 chr5 136392097 136392202 -66693330 + MIR SINE MIR 118 219 -43 413 280 115 19 chr5 136392937 136393094 -66692438 + MIR3 SINE MIR 36 207 -1 264 122 0 0 chr5 136393513 136393554 -66691978 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 448 356 48 61 chr5 136393566 136393942 -66691590 - L2 LINE L2 -1 3271 2901 621 279 48 6 chr5 136394450 136394615 -66690917 + MER91A DNA MER1_type 13 184 -12 21 0 0 0 chr5 136395259 136395280 -66690252 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 136397206 136397231 -66688301 + AT_rich Low_complexity Low_complexity 1 25 0 201 176 0 0 chr5 136401346 136401380 -66684152 + (TA)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr5 136402624 136402645 -66682887 + AT_rich Low_complexity Low_complexity 1 21 0 198 316 13 13 chr5 136403176 136403252 -66682280 - L2 LINE L2 0 3313 3238 347 254 64 0 chr5 136404621 136404731 -66680801 - MIR SINE MIR -16 246 130 21 71 0 0 chr5 136404850 136404892 -66680640 + AT_rich Low_complexity Low_complexity 1 42 0 1595 269 52 9 chr5 136407182 136407668 -66677864 - L2 LINE L2 -351 2921 2420 261 0 0 0 chr5 136408629 136408658 -66676874 + (CA)n Simple_repeat Simple_repeat 2 30 0 467 33 16 0 chr5 136409479 136409540 -66675992 + (CA)n Simple_repeat Simple_repeat 1 62 0 1137 218 146 41 chr5 136409645 136410063 -66675469 + MLT1C LTR MaLR 6 467 0 2045 135 3 3 chr5 136410350 136410647 -66674885 - AluSx SINE Alu -15 297 1 899 216 12 6 chr5 136410659 136410826 -66674706 - MLT1A2 LTR MaLR -2 372 205 354 197 66 0 chr5 136410814 136410890 -66674642 - MLT1A2 LTR MaLR -293 81 1 * 28 71 0 0 chr5 136410975 136411031 -66674501 + AT_rich Low_complexity Low_complexity 1 56 0 1270 257 16 45 chr5 136411806 136412184 -66673348 + MLT1H LTR MaLR 40 406 -143 207 0 0 0 chr5 136412613 136412636 -66672896 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1192 199 17 25 chr5 136412876 136413117 -66672415 - MIR SINE MIR -11 251 13 551 98 11 0 chr5 136413582 136413674 -66671858 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 342 0 0 0 chr5 136413794 136413832 -66671700 + (TG)n Simple_repeat Simple_repeat 2 39 0 402 221 153 99 chr5 136413868 136414090 -66671442 + MIR SINE MIR 8 241 -21 2238 115 0 0 chr5 136414293 136414588 -66670944 - AluSx SINE Alu -17 295 1 1281 237 138 47 chr5 136414695 136415202 -66670330 - MLT1H1 LTR MaLR -2 553 1 2580 141 19 2 chr5 136416958 136417385 -66668147 - L1MB3 LINE L1 0 6183 5750 1559 111 5 5 chr5 136417395 136417612 -66667920 - AluSq SINE Alu -96 217 1 266 359 46 0 chr5 136417767 136417898 -66667634 - L2 LINE L2 -196 3076 2940 348 353 39 20 chr5 136417944 136418097 -66667435 + L2 LINE L2 3105 3260 -12 395 286 134 35 chr5 136418196 136418367 -66667165 - MIR SINE MIR -73 189 2 637 217 94 17 chr5 136418459 136418639 -66666893 - MIR SINE MIR -1 261 68 236 146 36 0 chr5 136419780 136419835 -66665697 + CT-rich Low_complexity Low_complexity 1 57 0 580 193 17 17 chr5 136424629 136424748 -66660784 + Tigger7 DNA MER2_type 1 119 -431 207 0 0 0 chr5 136426278 136426301 -66659231 + (CAA)n Simple_repeat Simple_repeat 2 24 0 323 233 117 10 chr5 136426893 136426996 -66658536 - MIR3 SINE MIR -14 194 81 1615 183 54 4 chr5 136427322 136427601 -66657931 - AluJb SINE Alu -18 294 2 941 240 60 104 chr5 136427885 136428355 -66657177 - MER21B LTR ERV1 -157 706 258 230 357 8 56 chr5 136429156 136429282 -66656250 - L3b LINE CR1 -32 1551 1432 513 145 0 26 chr5 136429953 136430070 -66655462 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 299 25 25 0 chr5 136430579 136430619 -66654913 + (TG)n Simple_repeat Simple_repeat 1 41 0 297 226 255 10 chr5 136430804 136430906 -66654626 - L2 LINE L2 0 3272 3146 203 174 304 18 chr5 136431212 136431300 -66654232 + MIR SINE MIR 63 180 -28 603 313 124 23 chr5 136431406 136431797 -66653735 + L3 LINE CR1 753 1183 -394 369 316 74 8 chr5 136431797 136431948 -66653584 + MIR SINE MIR 1 163 -45 594 297 53 11 chr5 136431952 136432310 -66653222 - MLT1J2 LTR MaLR 0 450 1 228 268 14 14 chr5 136433217 136433288 -66652244 - MLT1J2-int LTR MaLR -1664 71 1 546 266 103 16 chr5 136433288 136433472 -66652060 - MLT1J2 LTR MaLR 0 450 251 412 193 101 3 chr5 136433529 136433639 -66651893 - MLT1J2 LTR MaLR -306 140 1 677 300 131 18 chr5 136433712 136434055 -66651477 + L3 LINE CR1 1183 1564 -13 474 322 151 4 chr5 136434294 136434533 -66650999 + L2 LINE L2 2430 2703 -611 212 207 17 17 chr5 136436039 136436097 -66649435 + A-rich Low_complexity Low_complexity 4 61 0 23 0 0 0 chr5 136436878 136436901 -66648631 + AT_rich Low_complexity Low_complexity 1 23 0 2055 123 3 0 chr5 136436920 136437205 -66648327 + AluSx SINE Alu 22 307 -5 368 266 135 18 chr5 136437283 136437505 -66648027 + L1ME4a LINE L1 5793 6040 -81 31 26 0 0 chr5 136437718 136437756 -66647776 + AT_rich Low_complexity Low_complexity 1 38 0 1394 105 46 14 chr5 136438246 136438465 -66647067 + AluSg/x SINE Alu 76 301 -11 22 0 0 0 chr5 136438768 136438790 -66646742 + AT_rich Low_complexity Low_complexity 1 22 0 201 240 177 21 chr5 136440552 136440648 -66644884 + L2 LINE L2 3197 3307 -6 232 266 16 0 chr5 136441646 136441710 -66643822 - MIR SINE MIR -41 221 157 440 268 182 10 chr5 136441819 136442017 -66643515 + LTR67 LTR ERVL 87 318 -239 396 222 30 59 chr5 136442065 136442200 -66643332 + LTR67 LTR ERVL 427 557 0 4954 69 23 3 chr5 136442209 136442829 -66642703 - L1PA10 LINE L1 -2 6166 5535 498 286 14 7 chr5 136442832 136442972 -66642560 - MIR SINE MIR -102 160 20 397 263 45 38 chr5 136443119 136443252 -66642280 - MIR SINE MIR -46 216 83 2073 128 13 0 chr5 136443533 136443831 -66641701 + AluSx SINE Alu 1 302 -10 448 218 36 168 chr5 136444003 136444253 -66641279 - L1MDa LINE L1 -3171 2958 2833 814 164 112 87 chr5 136444253 136444565 -66640967 + MER33 DNA MER1_type 1 320 -4 448 218 36 168 chr5 136444565 136444921 -66640611 - L1MDa LINE L1 -3296 2833 2432 314 271 130 48 chr5 136445146 136445353 -66640179 - L1MDa LINE L1 -4451 1678 1455 1099 171 17 62 chr5 136445383 136445623 -66639909 + MLT1D LTR MaLR 7 235 -270 1331 194 65 16 chr5 136445670 136445979 -66639553 + MLT1D LTR MaLR 182 505 0 320 209 9 26 chr5 136446140 136446255 -66639277 + CT-rich Low_complexity Low_complexity 4 116 0 239 211 11 111 chr5 136446275 136446365 -66639167 + L2 LINE L2 3233 3313 0 257 288 47 16 chr5 136446394 136446585 -66638947 - L1MDa LINE L1 -4894 1416 1220 426 296 90 56 chr5 136447086 136447708 -66637824 - L1MDa LINE L1 -4966 1153 511 634 160 0 0 chr5 136448727 136448833 -66636699 - MER41A LTR ERV1 -88 466 361 9850 20 1 0 chr5 136448858 136450779 -66634753 - L1PA2 LINE L1 -2 6153 4231 2279 92 0 0 chr5 136451513 136451797 -66633735 + AluSx SINE Alu 12 295 -17 1208 153 5 14 chr5 136452195 136452410 -66633122 - AluSq SINE Alu -96 217 5 824 241 121 35 chr5 136453460 136453882 -66631650 + MLT1C LTR MaLR 1 467 0 1771 164 3 3 chr5 136454174 136454466 -66631066 - AluSx SINE Alu -20 292 1 472 290 39 0 chr5 136455503 136455658 -66629874 - L2 LINE L2 -402 2912 2752 192 345 36 36 chr5 136457683 136457793 -66627739 + L2 LINE L2 3144 3253 -19 311 262 117 10 chr5 136459932 136460035 -66625497 - MIR3 SINE MIR -14 194 81 834 291 58 8 chr5 136460386 136460644 -66624888 - AluJb SINE Alu -40 272 2 1214 202 16 24 chr5 136461081 136461328 -66624204 - MIR SINE MIR -5 257 13 551 98 11 0 chr5 136461793 136461885 -66623647 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 315 0 0 0 chr5 136462005 136462040 -66623492 + (TG)n Simple_repeat Simple_repeat 1 35 0 848 194 21 0 chr5 136463971 136464157 -66621375 + MLT1D LTR MaLR 46 235 -270 203 290 16 0 chr5 136464169 136464231 -66621301 + GA-rich Low_complexity Low_complexity 3 65 0 1013 218 26 23 chr5 136464232 136464513 -66621019 + MLT1D LTR MaLR 242 505 0 359 227 14 14 chr5 136464675 136464816 -66620716 + CT-rich Low_complexity Low_complexity 4 144 0 239 211 11 111 chr5 136464836 136464926 -66620606 + L2 LINE L2 3233 3313 0 247 281 47 21 chr5 136464955 136465147 -66620385 - L1MEc LINE L1 -4894 1416 1220 425 296 90 56 chr5 136465648 136466270 -66619262 - L1MEc LINE L1 -4966 1153 511 628 160 0 0 chr5 136467289 136467395 -66618137 - MER41A LTR ERV1 -88 466 361 1673 20 5 0 chr5 136467420 136467617 -66617915 - L1PA2 LINE L1 -2 6153 5956 40515 34 28 2 chr5 136467617 136472901 -66612631 - L1PA2 LINE L1 -723 5432 6 1972 150 0 20 chr5 136473401 136473695 -66611837 + AluSx SINE Alu 1 288 -24 202 250 16 16 chr5 136474262 136474326 -66611206 + CT-rich Low_complexity Low_complexity 1 64 0 241 268 51 25 chr5 136475459 136475616 -66609916 - MER103 DNA DNA -5 161 1 375 295 93 30 chr5 136475945 136476213 -66609319 + L1ME4a LINE L1 4585 4869 -1277 463 265 37 15 chr5 136476242 136476378 -66609154 - MIR SINE MIR -7 255 117 373 259 63 78 chr5 136476496 136476667 -66608865 + L1ME4a LINE L1 5871 6038 -83 2404 90 0 0 chr5 136476667 136476966 -66608566 - AluSx SINE Alu -13 299 1 373 259 63 78 chr5 136476966 136477049 -66608483 + L1ME4a LINE L1 6038 6121 0 221 269 129 11 chr5 136477954 136478047 -66607485 - L2 LINE L2 -984 2330 2227 26 64 0 0 chr5 136478067 136478114 -66607418 + AT_rich Low_complexity Low_complexity 1 47 0 241 311 10 19 chr5 136478120 136478223 -66607309 - MIR SINE MIR -89 173 72 582 264 68 23 chr5 136478226 136478446 -66607086 - MIR SINE MIR 0 262 33 392 235 20 10 chr5 136478575 136478677 -66606855 + MIR SINE MIR 160 262 0 229 210 0 99 chr5 136478873 136478954 -66606578 - L3b LINE CR1 -206 1377 1305 444 238 0 0 chr5 136480225 136480305 -66605227 + Tigger3(Golem) DNA MER2_type 1 80 -2949 27 0 0 0 chr5 136480402 136480429 -66605103 + AT_rich Low_complexity Low_complexity 1 27 0 239 108 0 0 chr5 136480429 136480466 -66605066 + Tigger3(Golem) DNA MER2_type 2919 2955 -74 444 222 0 0 chr5 136480480 136480561 -66604971 + Tigger3(Golem) DNA MER2_type 2 82 -2947 * 1279 97 62 31 chr5 136480559 136480818 -66604714 + Tigger3(Golem) DNA MER2_type 2226 2492 -537 2730 83 0 25 chr5 136480818 136481213 -66604319 - L1PA7 LINE L1 -1 6153 5769 40780 53 4 1 chr5 136481219 136487349 -66598183 - L1PA5 LINE L1 -3 6151 5 10769 144 15 77 chr5 136487350 136489704 -66595828 - L1P LINE L1 -3931 2215 9 2881 107 78 18 chr5 136489712 136490224 -66595308 + Tigger3(Golem) DNA MER2_type 2486 3028 -1 454 243 180 0 chr5 136491526 136491715 -66593817 + L1ME1 LINE L1 5927 6149 -17 546 262 52 17 chr5 136493144 136493316 -66592216 + L2 LINE L2 2147 2324 -990 559 218 192 32 chr5 136493325 136493481 -66592051 + MER5A DNA MER1_type 9 189 0 219 259 141 30 chr5 136494571 136494706 -66590826 - MER5A DNA MER1_type 0 189 40 302 295 115 0 chr5 136494783 136494905 -66590627 - L2 LINE L2 0 3272 3137 792 204 57 22 chr5 136496390 136496620 -66588912 + L1ME2 LINE L1 5851 6088 -76 199 341 48 48 chr5 136496703 136496829 -66588703 - MER5A DNA MER1_type -1 188 63 180 0 0 0 chr5 136498064 136498084 -66587448 + (T)n Simple_repeat Simple_repeat 1 20 0 1017 184 0 0 chr5 136498105 136498273 -66587259 + AluJb SINE Alu 135 302 -10 2111 91 0 58 chr5 136498849 136499158 -66586374 - AluY SINE Alu -20 291 1 283 262 71 67 chr5 136499434 136499644 -66585888 - L1ME4a LINE L1 -28 6093 5883 568 251 235 0 chr5 136499812 136499999 -66585533 - MIR SINE MIR -4 258 28 334 311 35 14 chr5 136500726 136500870 -66584662 + MIR3 SINE MIR 48 195 -13 353 373 49 18 chr5 136501084 136501309 -66584223 - L2 LINE L2 -194 3078 2847 250 313 166 21 chr5 136501381 136501665 -66583867 + L2 LINE L2 2863 3187 -126 845 272 93 80 chr5 136501710 136502323 -66583209 - L2 LINE L2 -464 2850 2230 225 0 0 0 chr5 136503369 136503394 -66582138 + (CA)n Simple_repeat Simple_repeat 2 26 0 334 146 24 0 chr5 136503394 136503476 -66582056 + (TA)n Simple_repeat Simple_repeat 1 84 0 434 316 132 34 chr5 136503500 136504031 -66581501 - L1MC4a LINE L1 -1966 5842 5260 30 0 0 0 chr5 136504112 136504142 -66581390 + AT_rich Low_complexity Low_complexity 1 30 0 280 264 70 23 chr5 136504226 136504355 -66581177 - L1ME4a LINE L1 -368 5753 5619 1022 152 35 15 chr5 136505023 136505221 -66580311 + MLT1B LTR MaLR 1 202 -188 785 243 78 67 chr5 136505280 136505880 -66579652 - L1MC5 LINE L1 -74 7887 7281 299 260 0 0 chr5 136506343 136506416 -66579116 + L1MC/D LINE L1 5696 5768 -2040 2865 12 0 6 chr5 136507946 136508266 -66577266 - AluYb8 SINE Alu 0 318 1 840 264 84 33 chr5 136509736 136510035 -66575497 + L2 LINE L2 2968 3281 -32 539 338 98 4 chr5 136510047 136510281 -66575251 - MIR SINE MIR -5 257 2 270 0 0 0 chr5 136510549 136510579 -66574953 + (T)n Simple_repeat Simple_repeat 1 30 0 3418 67 0 5 chr5 136511015 136511462 -66574070 - L1PA7 LINE L1 0 6154 5710 21 0 0 0 chr5 136511520 136511541 -66573991 + AT_rich Low_complexity Low_complexity 1 21 0 355 297 36 9 chr5 136511541 136511652 -66573880 + L2 LINE L2 3156 3269 -3 686 262 103 26 chr5 136513257 136513490 -66572042 - MIR SINE MIR -8 254 4 230 49 0 49 chr5 136514623 136514664 -66570868 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 850 166 67 53 chr5 136515040 136515299 -66570233 + L1ME1 LINE L1 5909 6332 -2 369 142 0 75 chr5 136515939 136516073 -66569459 + (CCCCCT)n Simple_repeat Simple_repeat 2 125 0 614 286 146 30 chr5 136516796 136517359 -66568173 - L1ME3A LINE L1 -223 5947 5320 1348 270 122 25 chr5 136517362 136517738 -66567794 - L1ME3A LINE L1 -896 5250 4912 1067 222 92 24 chr5 136517738 136518076 -66567456 + MLT1A1 LTR MaLR 1 361 -4 1348 270 122 25 chr5 136518076 136518583 -66566949 - L1ME3A LINE L1 -1234 4912 4281 451 294 143 14 chr5 136518586 136519028 -66566504 - L1ME3A LINE L1 -1898 4248 3750 2555 66 0 0 chr5 136519062 136519366 -66566166 - AluY SINE Alu -7 304 1 315 254 28 55 chr5 136520693 136520874 -66564658 + L1MC5 LINE L1 7754 7929 -32 628 240 64 15 chr5 136520951 136521335 -66564197 + LTR16A LTR ERVL 16 445 -5 623 251 6 55 chr5 136521347 136521530 -66564002 - MIR3 SINE MIR -1 207 34 438 273 65 7 chr5 136521831 136521970 -66563562 - MLT1L LTR MaLR -235 380 234 414 167 0 0 chr5 136522122 136522182 -66563350 - AluJ/FRAM SINE Alu -29 283 224 2875 108 87 84 chr5 136522227 136522741 -66562791 - L1MA9 LINE L1 0 6312 5794 2346 87 0 3 chr5 136522741 136523052 -66562480 - AluY SINE Alu 0 311 2 2875 108 87 84 chr5 136523052 136523193 -66562339 - L1MA9 LINE L1 -518 5794 5655 24 0 0 0 chr5 136523681 136523705 -66561827 + AT_rich Low_complexity Low_complexity 1 24 0 193 267 0 0 chr5 136523939 136523984 -66561548 - MIR SINE MIR -5 257 213 798 299 14 0 chr5 136524074 136524288 -66561244 - MIR SINE MIR -17 245 29 1852 126 8 0 chr5 136524490 136524775 -66560757 - AluSx SINE Alu 0 312 26 286 339 9 26 chr5 136524957 136525072 -66560460 - MIR3 SINE MIR -87 121 9 364 248 68 60 chr5 136525961 136526078 -66559454 + L2 LINE L2 3142 3259 -13 205 189 0 0 chr5 136526405 136526442 -66559090 + (CATA)n Simple_repeat Simple_repeat 3 39 0 406 216 43 68 chr5 136526443 136526605 -66558927 - L1ME4a LINE L1 -3 6118 5961 334 246 73 59 chr5 136526620 136526852 -66558680 - L2 LINE L2 0 3313 3002 239 178 89 22 chr5 136526895 136526985 -66558547 - L1ME4a LINE L1 -284 5837 5742 27 73 0 0 chr5 136527398 136527453 -66558079 + AT_rich Low_complexity Low_complexity 1 55 0 311 246 200 8 chr5 136527592 136527722 -66557810 - L1ME4a LINE L1 -869 5277 5123 21 0 0 0 chr5 136528093 136528114 -66557418 + AT_rich Low_complexity Low_complexity 1 21 0 2088 168 35 25 chr5 136528203 136528601 -66556931 - MER93a LTR ERV1 0 402 1 503 281 6 44 chr5 136528719 136528879 -66556653 - MIR SINE MIR 0 262 109 238 250 6 75 chr5 136529065 136529223 -66556309 - MIR SINE MIR -68 194 19 2972 253 57 50 chr5 136529998 136530676 -66554856 + L1M3e LINE L1 2048 2720 -4845 581 269 0 0 chr5 136530676 136530795 -66554737 + FLAM_A SINE Alu 1 119 -14 2972 253 57 50 chr5 136530795 136531622 -66553910 + L1M3e LINE L1 2720 3540 -4025 3335 98 4 0 chr5 136531622 136532092 -66553440 + L1PA13 LINE L1 5536 6007 -156 5049 171 46 27 chr5 136532097 136533275 -66552257 + L1M3e LINE L1 3866 5065 -2500 472 243 14 40 chr5 136533251 136533399 -66552133 - L1ME LINE L1 -591 5573 5430 * 548 57 0 0 chr5 136533471 136533541 -66551991 - AluJ/FRAM SINE Alu -10 302 233 1665 162 81 32 chr5 136533825 136534107 -66551425 - MLT1A1 LTR MaLR -3 362 58 4730 146 57 26 chr5 136534107 136534998 -66550534 - MER49 LTR ERV1 0 923 5 1665 162 81 32 chr5 136534998 136535060 -66550472 - MLT1A1 LTR MaLR -307 58 1 483 286 39 39 chr5 136535990 136536095 -66549437 - MER5A DNA MER1_type 0 189 82 2012 123 17 17 chr5 136536095 136536444 -66549088 - L1MB3 LINE L1 -4 6179 5831 483 286 39 39 chr5 136536444 136536516 -66549016 - MER5A DNA MER1_type -106 83 12 2409 156 14 19 chr5 136536617 136537033 -66548499 + MLT2D LTR ERVL 1 414 0 672 183 158 6 chr5 136537186 136537350 -66548182 - MER5A DNA MER1_type 0 189 1 442 175 10 10 chr5 136537500 136537597 -66547935 - MER20B DNA MER1_type 0 783 687 1968 108 75 0 chr5 136537606 136537884 -66547648 + AluSx SINE Alu 1 299 -13 1904 64 64 123 chr5 136537884 136538210 -66547322 + AluY SINE Alu 1 307 -4 1197 201 91 59 chr5 136538215 136538623 -66546909 - MLT1D LTR MaLR -84 421 1 2553 133 80 8 chr5 136538651 136539111 -66546421 + LTR12 LTR ERV1 1 477 -237 367 245 65 69 chr5 136539113 136539329 -66546203 - L1M4 LINE L1 -2202 3944 3730 2104 142 0 3 chr5 136539883 136540194 -66545338 - AluSx SINE Alu -2 310 1 30 83 0 0 chr5 136540312 136540384 -66545148 + AT_rich Low_complexity Low_complexity 1 72 0 471 216 135 40 chr5 136540422 136540644 -66544888 - L1MC4 LINE L1 0 8042 7800 239 191 0 0 chr5 136540660 136540702 -66544830 - MIR SINE MIR -111 151 110 957 220 18 9 chr5 136540780 136541003 -66544529 - L1MD2 LINE L1 -14 6345 6121 1849 141 66 3 chr5 136541005 136541352 -66544180 - L1MB3 LINE L1 -1 6418 6050 295 164 0 0 chr5 136541368 136541423 -66544109 - L1PA13 LINE L1 -16 6147 6093 6636 210 44 16 chr5 136541424 136541949 -66543583 - L1PA12 LINE L1 -4179 3405 2896 2185 145 0 0 chr5 136541949 136542259 -66543273 - AluSx SINE Alu -2 310 1 6636 210 44 16 chr5 136542259 136544444 -66541088 - L1PA12 LINE L1 -4688 2896 7 1076 150 0 0 chr5 136544452 136544632 -66540900 - L1MB3 LINE L1 -346 6061 5882 11154 88 4 6 chr5 136544810 136547170 -66538362 - L1PA8 LINE L1 -11 6476 4113 15577 145 16 52 chr5 136547171 136551057 -66534475 - L1PA8 LINE L1 -2616 3845 6 2264 228 84 6 chr5 136551071 136551596 -66533936 - MER21B LTR ERV1 -84 779 175 8338 218 54 67 chr5 136551605 136552299 -66533233 - L1MB3 LINE L1 -768 5614 4912 940 191 120 96 chr5 136552299 136552717 -66532815 + MSTC LTR MaLR 1 428 0 8338 218 54 67 chr5 136552717 136554855 -66530677 - L1MB3 LINE L1 -1470 4912 2821 310 145 92 0 chr5 136554840 136554916 -66530616 - L1MB3 LINE L1 -4160 2224 2142 * 13899 215 17 17 chr5 136554931 136559642 -66525890 - L1PB2 LINE L1 -3 6148 1437 * 30711 113 13 59 chr5 136559637 136566088 -66519444 - L1PA7 LINE L1 0 6154 13 2119 113 0 3 chr5 136566250 136566556 -66518976 + AluSx SINE Alu 2 306 0 1099 93 40 0 chr5 136567194 136567340 -66518192 + AluY SINE Alu 136 288 -19 528 16 0 0 chr5 136567340 136567401 -66518131 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1711 194 65 56 chr5 136567448 136568008 -66517524 - L1ME2 LINE L1 0 6184 5634 4004 213 129 43 chr5 136568024 136569420 -66516112 - L1ME2 LINE L1 -684 5482 3972 219 36 0 0 chr5 136569429 136569457 -66516075 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2105 187 3 0 chr5 136569531 136569895 -66515637 - MLT1A1 LTR MaLR 0 365 1 185 219 14 0 chr5 136570954 136571027 -66514505 + CT-rich Low_complexity Low_complexity 2 75 0 1246 120 30 43 chr5 136573198 136573432 -66512100 - L1MB4 LINE L1 -6 6174 5944 21 0 0 0 chr5 136573441 136573462 -66512070 + AT_rich Low_complexity Low_complexity 1 21 0 277 301 97 9 chr5 136573636 136573749 -66511783 - L2 LINE L2 -1 3271 3149 1271 134 73 4 chr5 136574112 136574344 -66511188 + L1MB7 LINE L1 5913 6160 -24 22 0 0 0 chr5 136574344 136574366 -66511166 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 136575563 136575584 -66509948 + AT_rich Low_complexity Low_complexity 1 21 0 458 244 191 7 chr5 136577323 136577606 -66507926 - L1ME4a LINE L1 -72 6049 5715 323 204 239 0 chr5 136577624 136577712 -66507820 - L2 LINE L2 -4 3309 3201 1385 136 4 35 chr5 136577939 136578167 -66507365 - AluJb SINE Alu -18 294 74 693 306 168 16 chr5 136578172 136578554 -66506978 - L3 LINE CR1 -382 1195 756 234 290 0 16 chr5 136578602 136578664 -66506868 + L2 LINE L2 3244 3304 -9 194 283 0 0 chr5 136578735 136578781 -66506751 + L2 LINE L2 3266 3311 -2 313 304 62 18 chr5 136578853 136578965 -66506567 - L3 LINE CR1 -1013 564 448 1205 178 185 13 chr5 136578984 136579287 -66506245 + MLT1A2 LTR MaLR 19 373 -1 647 298 76 42 chr5 136579466 136579704 -66505828 + MIR SINE MIR 2 247 -15 910 166 12 30 chr5 136579921 136580090 -66505442 - FRAM SINE Alu 0 166 1 21 0 0 0 chr5 136580123 136580144 -66505388 + AT_rich Low_complexity Low_complexity 1 21 0 677 165 35 71 chr5 136580497 136580667 -66504865 - FAM SINE Alu -12 173 10 285 269 167 0 chr5 136581135 136581243 -66504289 - L1MC/D LINE L1 -2006 5802 5677 2113 261 139 20 chr5 136581338 136581869 -66503663 - L1ME3A LINE L1 0 6239 5772 1563 130 190 0 chr5 136581869 136582169 -66503363 - MER46B DNA MER2_type -4 232 1 2113 261 139 20 chr5 136582169 136585055 -66500477 - L1ME3A LINE L1 -467 5772 2336 7399 35 11 4 chr5 136585063 136586640 -66498892 - L1PA4 LINE L1 0 6155 4582 511 0 0 0 chr5 136586640 136586696 -66498836 + L1PA4 LINE L1 4512 4567 -1579 267 260 141 16 chr5 136586699 136586891 -66498641 - L1ME3A LINE L1 -4025 2371 2156 862 326 65 15 chr5 136587148 136587672 -66497860 - L1ME3A LINE L1 -4579 1817 1268 894 182 112 0 chr5 136587873 136588043 -66497489 + AluJb SINE Alu 98 286 -26 590 292 18 33 chr5 136588045 136588319 -66497213 + L1ME3A LINE L1 5377 5646 -524 226 211 0 0 chr5 136588399 136588451 -66497081 + L1ME3A LINE L1 5911 5962 -208 254 243 29 58 chr5 136588520 136588623 -66496909 + L1ME3A LINE L1 5965 6064 -106 318 216 40 14 chr5 136591672 136591746 -66493786 + L2 LINE L2 3237 3312 -1 614 258 191 0 chr5 136592080 136592289 -66493243 - MIR SINE MIR -12 250 2 285 297 60 3 chr5 136592664 136592770 -66492762 + MIR SINE MIR 20 132 -76 292 52 379 0 chr5 136592770 136592828 -66492704 + MADE1 DNA Mariner 1 80 0 300 277 89 9 chr5 136592828 136592940 -66492592 + MIR SINE MIR 136 256 -6 180 222 0 93 chr5 136593643 136593697 -66491835 + L2 LINE L2 3179 3227 -86 219 114 0 0 chr5 136597688 136597723 -66487809 + (TA)n Simple_repeat Simple_repeat 1 35 0 749 193 78 0 chr5 136597723 136597889 -66487643 + MER46A DNA MER2_type 13 191 -45 620 152 9 0 chr5 136597886 136597991 -66487541 + MER46A DNA MER2_type 131 236 0 * 239 325 96 0 chr5 136598885 136598968 -66486564 - L2 LINE L2 -899 2415 2325 * 1305 203 57 13 chr5 136598950 136599250 -66486282 + Charlie1b DNA MER1_type 26 338 -185 237 158 0 0 chr5 136599283 136599321 -66486211 + Charlie1b DNA MER1_type 486 523 0 278 284 0 0 chr5 136599326 136599393 -66486139 - L2 LINE L2 -993 2321 2255 248 316 44 35 chr5 136599391 136599505 -66486027 + L2 LINE L2 2652 2766 -548 * 521 259 212 0 chr5 136599539 136599732 -66485800 - MIR SINE MIR -28 234 1 712 296 150 29 chr5 136599734 136600225 -66485307 + L2 LINE L2 2759 3304 -9 1023 180 0 6 chr5 136600759 136600931 -66484601 - AluJb SINE Alu -7 305 135 194 191 21 0 chr5 136600931 136600978 -66484554 + (TATATG)n Simple_repeat Simple_repeat 2 49 0 308 241 46 11 chr5 136600978 136601065 -66484467 - L1MC4 LINE L1 -1339 6703 6614 715 184 24 8 chr5 136601066 136601191 -66484341 - AluJb SINE Alu -183 129 3 411 188 79 59 chr5 136601405 136601478 -66484054 + MER46A DNA MER2_type 1 78 -158 2357 100 19 35 chr5 136601478 136601848 -66483684 - THE1B LTR MaLR 0 364 1 411 188 79 59 chr5 136601848 136601875 -66483657 + MER46A DNA MER2_type 78 103 -133 274 299 141 22 chr5 136601890 136602074 -66483458 - LTR33A LTR ERVL -211 312 107 240 357 29 64 chr5 136604459 136604501 -66481031 - MIR3 SINE MIR -39 169 127 237 33 0 0 chr5 136604501 136604531 -66481001 + (CAA)n Simple_repeat Simple_repeat 2 31 0 240 357 29 64 chr5 136604531 136604628 -66480904 - MIR3 SINE MIR -81 127 35 1876 178 0 0 chr5 136605612 136605910 -66479622 - AluJb SINE Alu -14 298 1 470 346 111 30 chr5 136606291 136606863 -66478669 - L2 LINE L2 -9 3304 2682 590 332 129 16 chr5 136606875 136607315 -66478217 - L2 LINE L2 -886 2428 1939 924 177 50 15 chr5 136608396 136608594 -66476938 + LTR43 LTR ERV1 316 520 -82 22 35 0 0 chr5 136608717 136608746 -66476786 + AT_rich Low_complexity Low_complexity 1 29 0 243 265 61 51 chr5 136608899 136608997 -66476535 - L3 LINE CR1 -335 1242 1144 562 280 70 73 chr5 136609045 136609388 -66476144 - L2 LINE L2 -1001 2313 1972 241 277 36 0 chr5 136609433 136609516 -66476016 - L2 LINE L2 -2008 1306 1221 23 54 0 0 chr5 136609692 136609729 -66475803 + AT_rich Low_complexity Low_complexity 1 37 0 990 156 42 10 chr5 136609741 136609933 -66475599 - MER105 DNA DNA -4 200 3 318 259 59 0 chr5 136610237 136610322 -66475210 + L3 LINE CR1 1240 1329 -248 23 0 0 0 chr5 136611044 136611067 -66474465 + AT_rich Low_complexity Low_complexity 1 23 0 848 291 97 9 chr5 136611393 136611723 -66473809 + L1MEc LINE L1 80 438 -5958 666 130 113 9 chr5 136612055 136612170 -66473362 - FLAM_C SINE Alu -6 127 1 180 0 0 0 chr5 136612613 136612633 -66472899 + (A)n Simple_repeat Simple_repeat 1 20 0 311 263 63 34 chr5 136613737 136613912 -66471620 - L1ME4a LINE L1 -218 5903 5724 23 68 0 0 chr5 136614622 136614666 -66470866 + AT_rich Low_complexity Low_complexity 1 44 0 1675 184 57 13 chr5 136615575 136615891 -66469641 + MER7A DNA MER2_type 5 332 -14 1737 168 46 3 chr5 136615907 136616192 -66469340 - AluJb SINE Alu -15 297 1 198 0 0 0 chr5 136616964 136616986 -66468546 + (A)n Simple_repeat Simple_repeat 1 22 0 182 350 70 20 chr5 136617116 136617216 -66468316 + L2 LINE L2 3160 3264 -8 21 36 0 0 chr5 136618140 136618168 -66467364 + AT_rich Low_complexity Low_complexity 1 28 0 300 298 165 6 chr5 136619296 136619470 -66466062 - MIR3 SINE MIR -6 202 2 2367 84 3 0 chr5 136619789 136620087 -66465445 - AluSp SINE Alu -14 299 1 1787 189 3 0 chr5 136622808 136623093 -66462439 - AluJo SINE Alu -22 290 5 2310 144 3 9 chr5 136624539 136624879 -66460653 - MER1B DNA MER1_type 0 339 2 392 309 243 11 chr5 136625093 136625274 -66460258 + MIR SINE MIR 11 233 -29 2041 185 29 68 chr5 136625741 136625969 -66459563 - L1MB5 LINE L1 -127 6047 5812 2360 81 0 3 chr5 136625969 136626267 -66459265 - AluY SINE Alu -12 299 3 2041 185 29 68 chr5 136626267 136626280 -66459252 - L1MB5 LINE L1 -362 5812 5800 689 162 0 44 chr5 136626280 136626416 -66459116 - FLAM_A SINE Alu 0 133 4 2041 185 29 68 chr5 136626416 136626686 -66458846 - L1MB5 LINE L1 -374 5800 5558 287 297 133 12 chr5 136626874 136627039 -66458493 - MIR SINE MIR -49 213 29 271 267 192 70 chr5 136627111 136627283 -66458249 + MIR SINE MIR 69 261 -1 2128 143 0 0 chr5 136627329 136627637 -66457895 + AluSq SINE Alu 1 308 -5 1774 171 4 0 chr5 136628089 136628370 -66457162 + AluJo SINE Alu 1 282 -30 1808 221 43 16 chr5 136628592 136629032 -66456500 + LTR40c LTR ERVL 1 452 -13 336 291 151 48 chr5 136629928 136630220 -66455312 - L2 LINE L2 -342 2972 2651 394 350 39 11 chr5 136630267 136630447 -66455085 + L1MC4 LINE L1 5480 5664 -2144 393 320 128 18 chr5 136630463 136630682 -66454850 + MIR SINE MIR 6 248 -14 498 247 62 41 chr5 136630739 136630933 -66454599 + L1MC4 LINE L1 6505 6702 -1340 1929 112 42 7 chr5 136632709 136632996 -66452536 - AluSx SINE Alu -14 298 2 208 203 25 63 chr5 136633004 136633041 -66452491 + (TATATG)n Simple_repeat Simple_repeat 6 43 -38 1344 160 124 47 chr5 136633041 136633379 -66452153 + MLT1A1 LTR MaLR 1 364 -1 208 203 25 63 chr5 136633379 136633420 -66452112 + (TATATG)n Simple_repeat Simple_repeat 43 81 0 2012 243 259 16 chr5 136633421 136634287 -66451245 + L1MC4a LINE L1 6598 7673 -135 243 294 159 8 chr5 136634317 136634443 -66451089 + L1MC4 LINE L1 7756 7900 -142 279 329 0 0 chr5 136635188 136635270 -66450262 - MIR3 SINE MIR -9 199 118 10165 161 63 77 chr5 136635295 136639212 -66446320 + L1MC1 LINE L1 33 4006 -2607 921 114 0 0 chr5 136639212 136639335 -66446197 + FLAM_C SINE Alu 1 123 -20 10165 161 63 77 chr5 136639335 136639963 -66445569 + L1MC1 LINE L1 4006 4642 -1971 2134 124 6 16 chr5 136639963 136640278 -66445254 + AluSx SINE Alu 1 312 0 216 0 0 0 chr5 136640280 136640304 -66445228 + (CA)n Simple_repeat Simple_repeat 1 24 0 10165 161 63 77 chr5 136640304 136642325 -66443207 + L1MC1 LINE L1 4643 6613 0 1952 129 0 21 chr5 136643282 136643569 -66441963 + AluJb SINE Alu 11 291 -21 23 0 0 0 chr5 136643569 136643592 -66441940 + AT_rich Low_complexity Low_complexity 1 23 0 298 290 83 68 chr5 136694479 136694817 -66390715 - MERVL LTR ERVL -2944 2541 2199 828 333 61 25 chr5 136694921 136695366 -66390166 - MERVL LTR ERVL -3539 2225 1765 2240 118 0 13 chr5 136695638 136695952 -66389580 - AluSx SINE Alu -2 310 1 184 272 86 25 chr5 136697081 136697162 -66388370 + MIR3 SINE MIR 112 197 -11 1880 117 20 47 chr5 136697688 136697988 -66387544 - AluSx SINE Alu -20 292 1 23 54 0 0 chr5 136700737 136700774 -66384758 + AT_rich Low_complexity Low_complexity 1 37 0 428 270 45 19 chr5 136700932 136701072 -66384460 + MIR SINE MIR 31 127 -81 336 311 60 7 chr5 136701532 136701683 -66383849 + L2 LINE L2 3150 3308 -5 571 299 71 27 chr5 136704228 136704522 -66381010 + MLT1K LTR MaLR 281 587 -1 2403 97 0 0 chr5 136705643 136705951 -66379581 + AluSq SINE Alu 3 310 -3 2028 290 42 9 chr5 136706646 136707188 -66378344 + L1MDb LINE L1 9 568 -5841 4761 225 63 65 chr5 136707228 136707446 -66378086 + L1M4 LINE L1 3563 3780 -2366 763 189 0 15 chr5 136707446 136707578 -66377954 + FLAM_A SINE Alu 4 133 0 4761 225 63 65 chr5 136707578 136707593 -66377939 + L1M4 LINE L1 3780 3794 -2352 405 0 0 0 chr5 136707593 136707638 -66377894 + (TA)n Simple_repeat Simple_repeat 1 45 0 4761 225 63 65 chr5 136707638 136707832 -66377700 + L1M4 LINE L1 3794 3987 -2159 2225 112 0 0 chr5 136707832 136708162 -66377370 + AluSc SINE Alu 3 309 0 4761 225 63 65 chr5 136708162 136709490 -66376042 + L1M4 LINE L1 3987 5317 -829 1043 193 38 30 chr5 136709502 136709766 -66375766 + L1MD2 LINE L1 6085 6350 -9 2189 92 10 0 chr5 136709769 136710062 -66375470 + AluY SINE Alu 1 296 -15 2147 140 0 10 chr5 136710264 136710578 -66374954 + AluSx SINE Alu 1 311 -1 24 32 0 0 chr5 136710827 136710858 -66374674 + AT_rich Low_complexity Low_complexity 1 31 0 1827 180 3 3 chr5 136710954 136711260 -66374272 - AluJb SINE Alu -6 306 1 1644 175 13 23 chr5 136711703 136712006 -66373526 - AluJo SINE Alu -12 300 1 2095 127 3 0 chr5 136712742 136713042 -66372490 - AluSx SINE Alu -11 301 1 481 184 229 0 chr5 136713197 136713306 -66372226 - MER63 DNA MER1_type -76 760 1 461 321 71 6 chr5 136713517 136713685 -66371847 - MIR SINE MIR -50 212 34 2648 114 46 10 chr5 136713786 136714199 -66371333 + MSTA LTR MaLR 1 428 0 478 274 55 37 chr5 136714486 136714650 -66370882 - LTR33A LTR ERVL -7 516 350 297 0 0 0 chr5 136715215 136715248 -66370284 + (TG)n Simple_repeat Simple_repeat 2 34 0 458 175 39 7 chr5 136715320 136715474 -66370058 + (TA)n Simple_repeat Simple_repeat 1 159 0 422 269 174 35 chr5 136716370 136716571 -66368961 + L2 LINE L2 2528 2756 -558 364 269 32 58 chr5 136716546 136716702 -66368830 + MIR SINE MIR 101 252 -10 * 1829 155 0 16 chr5 136717699 136718002 -66367530 + AluSp SINE Alu 1 298 -15 201 250 21 0 chr5 136718761 136718809 -66366723 + CT-rich Low_complexity Low_complexity 3 51 0 470 303 35 7 chr5 136718920 136719065 -66366467 + MIR SINE MIR 16 164 -98 2446 195 43 8 chr5 136719297 136719785 -66365747 + MLT1D LTR MaLR 1 505 0 351 287 101 8 chr5 136719846 136719975 -66365557 - L1MC4a LINE L1 -1123 6685 6545 289 263 35 18 chr5 136721291 136721405 -66364127 - LTR67 LTR ERVL -8 549 434 299 105 0 0 chr5 136721566 136721631 -66363901 + Alu SINE Alu 245 309 0 550 293 49 0 chr5 136722033 136722197 -66363335 - MIR SINE MIR -2 260 89 1282 198 64 62 chr5 136723495 136723868 -66361664 + MLT1A2 LTR MaLR 1 374 0 1918 115 0 0 chr5 136725002 136725263 -66360269 - AluSx SINE Alu -14 298 38 562 227 47 8 chr5 136725335 136725463 -66360069 - FLAM_A SINE Alu 0 133 1 719 109 0 0 chr5 136725574 136725675 -66359857 - HY3 scRNA scRNA 0 101 1 207 0 0 0 chr5 136727549 136727572 -66357960 + (CTCG)n Simple_repeat Simple_repeat 2 24 0 345 246 165 99 chr5 136727630 136728062 -66357470 - L1M2 LINE L1 -5701 1148 525 200 288 85 68 chr5 136731036 136731154 -66354378 - MIR SINE MIR -114 148 29 187 247 0 82 chr5 136732122 136732195 -66353337 + MIR SINE MIR 186 252 -10 431 291 28 14 chr5 136733713 136733854 -66351678 - MLT1L LTR MaLR -345 270 128 1382 140 0 0 chr5 136733992 136734192 -66351340 - AluSx SINE Alu -111 201 2 2072 118 3 0 chr5 136734199 136734486 -66351046 - AluSq SINE Alu -25 288 1 244 151 0 38 chr5 136735374 136735427 -66350105 - L1MC4 LINE L1 -1334 6708 6658 244 258 52 30 chr5 136735463 136735604 -66349928 + HAL1b LINE L1 1213 6119 -2 342 307 16 85 chr5 136736949 136737138 -66348394 - MER5B DNA MER1_type -1 177 2 1662 164 31 40 chr5 136737321 136737364 -66348168 + MER2 DNA MER2_type 26 68 -277 2015 115 34 7 chr5 136737364 136737659 -66347873 + AluSg SINE Alu 1 303 -7 1662 164 31 40 chr5 136737659 136737938 -66347594 + MER2 DNA MER2_type 68 345 0 219 250 21 0 chr5 136738224 136738272 -66347260 - MIR3 SINE MIR -11 197 149 653 273 91 70 chr5 136738851 136739181 -66346351 + MER46C DNA MER2_type 2 338 0 195 262 146 39 chr5 136740241 136740344 -66345188 + L2 LINE L2 3196 3309 -4 1945 108 65 4 chr5 136740448 136740727 -66344805 - AluSx SINE Alu -15 297 2 2483 59 0 16 chr5 136740845 136741149 -66344383 + AluY SINE Alu 1 299 -12 1465 179 13 68 chr5 136741171 136741478 -66344054 - AluJo SINE Alu -12 300 11 24 0 0 0 chr5 136741513 136741537 -66343995 + AT_rich Low_complexity Low_complexity 1 24 0 1226 218 82 3 chr5 136741657 136741668 -66343864 - L1ME1 LINE L1 -102 6064 6054 1023 272 152 22 chr5 136741668 136741974 -66343558 - L1MB4 LINE L1 -143 6037 5650 375 23 0 0 chr5 136741974 136742018 -66343514 + (TG)n Simple_repeat Simple_repeat 1 44 0 1023 272 152 22 chr5 136742018 136742171 -66343361 - L1MB4 LINE L1 -530 5650 5518 187 340 113 28 chr5 136743531 136743637 -66341895 - L2 LINE L2 0 3272 3158 718 216 166 17 chr5 136743679 136743920 -66341612 - L1MC5 LINE L1 -591 7370 7094 2459 212 111 12 chr5 136743926 136744496 -66341036 - MER82 DNA MER2_type -6 647 22 411 191 0 71 chr5 136744637 136744721 -66340811 + L2 LINE L2 3190 3267 -5 516 162 12 2 chr5 136744993 136745235 -66340297 + AluJo SINE Alu 2 296 -16 449 284 52 28 chr5 136745575 136745786 -66339746 + MER112 DNA MER1_type 39 254 -6 347 306 24 63 chr5 136747986 136748192 -66337340 - HAL1 LINE L1 -85 2422 2225 340 293 61 20 chr5 136748230 136748377 -66337155 - HAL1 LINE L1 -150 2357 2205 327 346 15 0 chr5 136748625 136748758 -66336774 - HAL1 LINE L1 -1218 1289 1155 295 231 24 95 chr5 136748887 136749056 -66336476 - HAL1 LINE L1 -1540 967 811 212 237 40 66 chr5 136749192 136749268 -66336264 - L2 LINE L2 0 3272 3199 318 322 25 17 chr5 136749337 136749455 -66336077 - MIR3 SINE MIR -37 171 53 1524 215 59 50 chr5 136749595 136750019 -66335513 + MLT1E LTR MaLR 166 593 0 2091 223 86 15 chr5 136750019 136750565 -66334967 - Cheshire DNA MER1_type -1835 585 1 24 91 0 0 chr5 136750653 136750719 -66334813 + AT_rich Low_complexity Low_complexity 1 66 0 25 0 0 0 chr5 136751559 136751584 -66333948 + AT_rich Low_complexity Low_complexity 1 25 0 1520 108 33 0 chr5 136751589 136751830 -66333702 + L1MA5A LINE L1 6043 6291 -6 4875 144 29 2 chr5 136751878 136752709 -66332823 + L1PB4 LINE L1 5296 6148 -8 300 250 81 20 chr5 136752809 136752826 -66332706 - L1MA10 LINE L1 -2 6332 6316 3729 208 69 31 chr5 136752826 136753654 -66331878 - L1ME2 LINE L1 -10 6223 5312 1666 66 0 0 chr5 136753654 136753867 -66331665 + L1PA7 LINE L1 5932 6144 -10 3729 208 69 31 chr5 136753867 136754142 -66331390 - L1ME2 LINE L1 -921 5312 5049 597 177 80 0 chr5 136754152 136754265 -66331267 - FLAM_C SINE Alu -19 124 3 1410 180 45 4 chr5 136754322 136754589 -66330943 + AluJb SINE Alu 23 300 -12 1273 244 96 119 chr5 136754604 136755770 -66329762 - L1ME2 LINE L1 -2263 3952 2760 1832 148 21 7 chr5 136755770 136756061 -66329471 - AluSx SINE Alu -16 296 2 1273 244 96 119 chr5 136756061 136756568 -66328964 - L1ME2 LINE L1 -3455 2760 2243 1803 152 0 10 chr5 136756568 136756857 -66328675 - AluSx SINE Alu -18 294 9 1273 244 96 119 chr5 136756857 136757241 -66328291 - L1ME2 LINE L1 -3972 2243 1852 908 106 50 0 chr5 136757241 136757401 -66328131 - L1MA8 LINE L1 -12 6279 6112 1273 244 96 119 chr5 136757401 136757980 -66327552 - L1ME2 LINE L1 -4363 1852 1401 342 0 0 0 chr5 136757983 136758021 -66327511 + (TG)n Simple_repeat Simple_repeat 2 39 0 301 258 30 0 chr5 136758021 136758087 -66327445 - L1ME2 LINE L1 -5035 1182 1115 667 319 94 42 chr5 136758130 136758966 -66326566 - L1ME2 LINE L1 -5477 919 40 2599 118 24 56 chr5 136759054 136759504 -66326028 + MER83 LTR ERV1 2 437 -11 22 56 0 0 chr5 136760139 136760175 -66325357 + AT_rich Low_complexity Low_complexity 1 36 0 229 245 0 19 chr5 136761437 136761490 -66324042 - MER5A DNA MER1_type -83 106 55 221 159 34 159 chr5 136761456 136761544 -66323988 + MER5A DNA MER1_type 113 189 0 * 6294 168 58 5 chr5 136812951 136814204 -66271328 - L1 LINE L1 -1351 4795 3477 * 14233 173 25 2 chr5 136814180 136817846 -66267686 - L1PA13 LINE L1 -1 6162 2413 309 246 118 9 chr5 136818649 136818759 -66266773 + MIR SINE MIR 45 166 -96 276 330 18 9 chr5 136819344 136819456 -66266076 + MIR3 SINE MIR 91 203 -5 250 335 116 19 chr5 136820774 136820989 -66264543 - L2 LINE L2 -224 3048 2813 202 292 0 0 chr5 136821746 136821794 -66263738 + L2 LINE L2 3180 3227 -86 214 263 0 0 chr5 136822205 136822262 -66263270 + (TATG)n Simple_repeat Simple_repeat 2 58 0 229 287 101 23 chr5 136823600 136823729 -66261803 + MIR SINE MIR 111 249 -13 418 325 135 42 chr5 136824097 136824822 -66260710 - L2 LINE L2 0 3272 2439 2300 106 3 0 chr5 136826165 136826468 -66259064 + AluSx SINE Alu 5 308 -4 23 33 0 0 chr5 136827822 136827852 -66257680 + AT_rich Low_complexity Low_complexity 1 30 0 386 282 29 19 chr5 136828161 136828264 -66257268 + L2 LINE L2 3180 3283 -30 277 330 31 31 chr5 136828393 136828584 -66256948 - L2 LINE L2 -837 2477 2287 794 265 21 42 chr5 136828648 136828886 -66256646 - MIR SINE MIR 0 262 30 182 346 41 79 chr5 136828882 136829174 -66256358 - L2 LINE L2 -1327 1987 1707 * 1360 286 123 42 chr5 136829226 136830085 -66255447 - L2 LINE L2 0 3313 2400 21 0 0 0 chr5 136830513 136830534 -66254998 + AT_rich Low_complexity Low_complexity 1 21 0 447 242 237 11 chr5 136832240 136832426 -66253106 + MIR SINE MIR 25 252 -10 1552 185 169 5 chr5 136833195 136833573 -66251959 + L1MB7 LINE L1 5745 6184 0 710 227 0 0 chr5 136833779 136833911 -66251621 - FLAM_A SINE Alu -1 132 1 746 245 0 33 chr5 136834492 136834676 -66250856 - MER5B DNA MER1_type 0 178 1 197 278 49 118 chr5 136834974 136835118 -66250414 - L2 LINE L2 -508 2806 2673 252 283 10 81 chr5 136835438 136835537 -66249995 - L2 LINE L2 -334 2979 2888 855 165 49 37 chr5 136836545 136836709 -66248823 + AluJo SINE Alu 35 200 -112 254 237 203 45 chr5 136836762 136836939 -66248593 - L2 LINE L2 -100 3213 3009 24 0 0 0 chr5 136838125 136838149 -66247383 + AT_rich Low_complexity Low_complexity 1 24 0 2169 115 0 0 chr5 136838297 136838593 -66246939 - AluSg SINE Alu -14 296 1 2388 204 45 15 chr5 136838717 136839389 -66246143 + L1MA1 LINE L1 2713 3404 -2742 * 2677 147 28 16 chr5 136839384 136840027 -66245505 + L1MA1 LINE L1 4289 6217 -85 * 3851 160 25 17 chr5 136840018 136841332 -66244200 + L1MA2 LINE L1 4769 6073 -229 520 208 200 0 chr5 136841732 136841857 -66243675 - FRAM SINE Alu -25 151 2 264 223 0 36 chr5 136841863 136841975 -66243557 + (TATG)n Simple_repeat Simple_repeat 3 110 0 813 109 0 62 chr5 136841993 136842121 -66243411 - FLAM_C SINE Alu -13 120 1 180 0 0 0 chr5 136844043 136844063 -66241469 + (CAA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 136845425 136845446 -66240086 + AT_rich Low_complexity Low_complexity 1 21 0 1348 278 65 12 chr5 136845888 136846302 -66239230 - MLT1K LTR MaLR 0 588 153 9372 171 62 96 chr5 136846653 136847551 -66237981 - Cheshire DNA MER1_type -3 2417 1490 1097 185 45 0 chr5 136847551 136847751 -66237781 + AluJb SINE Alu 85 293 -19 9372 171 62 96 chr5 136847751 136849150 -66236382 - Cheshire DNA MER1_type -930 1490 6 267 284 184 0 chr5 136849400 136849541 -66235991 + MIR SINE MIR 20 186 -76 423 317 116 62 chr5 136849677 136850116 -66235416 - L3 LINE CR1 -767 810 348 1239 170 53 0 chr5 136850666 136850913 -66234619 - L1MA3 LINE L1 0 6305 6046 249 299 23 0 chr5 136850926 136851013 -66234519 - L1MC4 LINE L1 -1340 6702 6614 237 279 47 0 chr5 136850997 136851083 -66234449 + L1MC4 LINE L1 6614 6703 -1339 * 584 256 11 0 chr5 136851095 136851271 -66234261 + (TATG)n Simple_repeat Simple_repeat 2 179 0 1536 129 145 0 chr5 136851288 136851536 -66233996 - AluSx SINE Alu -17 285 2 622 110 45 77 chr5 136851536 136851691 -66233841 - L1MA3 LINE L1 -245 6060 5911 1445 254 73 66 chr5 136853426 136853566 -66231966 + L1MA8 LINE L1 466 604 -6885 2112 123 0 7 chr5 136853566 136853866 -66231666 - AluSx SINE Alu -14 298 1 1445 254 73 66 chr5 136853866 136854303 -66231229 + L1MA8 LINE L1 604 1047 -6442 5087 217 47 32 chr5 136854384 136855199 -66230333 + L1MA8 LINE L1 2040 2841 -4724 270 0 0 0 chr5 136855199 136855229 -66230303 + (CAA)n Simple_repeat Simple_repeat 2 31 0 5087 217 47 32 chr5 136855229 136855274 -66230258 + L1MA8 LINE L1 2841 2884 -4681 2116 144 0 3 chr5 136855274 136855586 -66229946 + AluSx SINE Alu 1 311 -1 5087 217 47 32 chr5 136855586 136857452 -66228080 + L1MA8 LINE L1 2884 4815 -2750 * 19432 182 28 8 chr5 136857450 136857864 -66227668 + L1PA13 LINE L1 868 1272 -5542 206 62 31 0 chr5 136857864 136857896 -66227636 + (CTG)n Simple_repeat Simple_repeat 1 33 0 19432 182 28 8 chr5 136857896 136863292 -66222240 + L1PA13 LINE L1 1272 6813 -1 6217 168 58 5 chr5 136863268 136864521 -66221011 + L1MA8 LINE L1 4128 5446 -1351 * 249 33 0 0 chr5 136865939 136865969 -66219563 + (A)n Simple_repeat Simple_repeat 1 30 0 4962 159 49 20 chr5 136865971 136867434 -66218098 + L1MA8 LINE L1 6202 7705 -5 585 315 68 8 chr5 136867628 136867863 -66217669 + MIR SINE MIR 14 262 0 205 178 287 30 chr5 136868131 136868232 -66217300 + MIR3 SINE MIR 13 139 -69 1538 241 75 31 chr5 136868246 136868670 -66216862 + MSTB2 LTR MaLR 15 457 0 2031 123 133 16 chr5 136869513 136869896 -66215636 - MSTA LTR MaLR 0 428 1 231 167 0 0 chr5 136870350 136870392 -66215140 + (TA)n Simple_repeat Simple_repeat 1 42 0 309 280 74 62 chr5 136870428 136870685 -66214847 - L2 LINE L2 -1486 1828 1569 22 35 0 0 chr5 136871310 136871339 -66214193 + AT_rich Low_complexity Low_complexity 1 29 0 2177 166 71 44 chr5 136872038 136872670 -66212862 - L1MB5 LINE L1 -8 6166 5447 488 228 0 16 chr5 136872689 136872812 -66212720 - L1M4 LINE L1 -3771 2375 2255 207 0 0 0 chr5 136873208 136873231 -66212301 + (TC)n Simple_repeat Simple_repeat 2 24 0 360 0 0 0 chr5 136873232 136873272 -66212260 + (TG)n Simple_repeat Simple_repeat 1 40 0 384 332 54 18 chr5 136874325 136874605 -66210927 - L1ME4a LINE L1 -248 5873 5584 316 338 109 14 chr5 136874903 136875113 -66210419 + L2 LINE L2 1728 1957 -1357 418 359 100 4 chr5 136875131 136875399 -66210133 + L2 LINE L2 2412 2705 -609 505 152 432 8 chr5 136875399 136875531 -66210001 + MER5A DNA MER1_type 1 188 -1 255 298 12 48 chr5 136875456 136875540 -66209992 - MER5A DNA MER1_type -102 87 7 * 1332 261 91 45 chr5 136875572 136876043 -66209489 - MLT1E LTR MaLR -92 501 9 24 32 0 0 chr5 136876463 136876494 -66209038 + AT_rich Low_complexity Low_complexity 1 31 0 2383 274 87 24 chr5 136876717 136877201 -66208331 + L1ME LINE L1 4 456 -5624 2053 97 0 7 chr5 136877201 136877480 -66208052 + AluSx SINE Alu 1 277 -35 194 61 0 30 chr5 136877484 136877517 -66208015 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2383 274 87 24 chr5 136877517 136878162 -66207370 + L1ME LINE L1 458 1198 -4882 23 86 0 0 chr5 136878925 136878983 -66206549 + AT_rich Low_complexity Low_complexity 1 58 0 252 253 25 13 chr5 136880291 136880370 -66205162 - L1MC4a LINE L1 -1895 5913 5834 255 173 39 0 chr5 136880407 136880459 -66205073 - L1MC4a LINE L1 -476 5645 5592 46 62 0 0 chr5 136881071 136881152 -66204380 + AT_rich Low_complexity Low_complexity 1 81 0 1993 141 3 0 chr5 136881152 136881435 -66204097 - AluJb SINE Alu -27 285 2 236 256 70 93 chr5 136881535 136881750 -66203782 - HAL1b LINE L1 -806 542 333 307 341 0 11 chr5 136881846 136881934 -66203598 - HAL1b LINE L1 -1157 191 105 27 29 0 0 chr5 136882067 136882101 -66203431 + AT_rich Low_complexity Low_complexity 1 34 0 203 171 79 0 chr5 136882214 136882290 -66203242 + (TA)n Simple_repeat Simple_repeat 1 82 0 834 169 6 36 chr5 136883201 136883367 -66202165 - THE1C LTR MaLR -2 373 213 804 164 136 37 chr5 136883814 136884028 -66201504 - THE1C LTR MaLR -129 235 1 9698 132 16 35 chr5 136884033 136885635 -66199897 - THE1C-int LTR MaLR -6 1574 4 1757 154 42 48 chr5 136885638 136886015 -66199517 - THE1C LTR MaLR 0 375 1 527 233 97 40 chr5 136886768 136886996 -66198536 - MLT1C LTR MaLR -226 241 1 300 367 0 17 chr5 136887556 136887676 -66197856 - MIR SINE MIR -140 122 5 309 267 67 25 chr5 136889230 136889350 -66196182 + MIR SINE MIR 97 221 -41 1969 194 99 13 chr5 136889538 136890003 -66195529 - MLT1D LTR MaLR 0 505 1 2037 101 3 47 chr5 136891216 136891540 -66193992 + AluSq SINE Alu 1 311 0 258 257 132 21 chr5 136893510 136893654 -66191878 - HAL1b LINE L1 -1100 248 89 329 126 11 35 chr5 136894266 136894353 -66191179 + (TTTC)n Simple_repeat Simple_repeat 3 87 0 435 204 68 92 chr5 136894824 136895114 -66190418 - MLT1H1 LTR MaLR -165 384 68 23 54 0 0 chr5 136895298 136895335 -66190197 + AT_rich Low_complexity Low_complexity 1 37 0 247 257 184 59 chr5 136895512 136895648 -66189884 + MIR3 SINE MIR 21 173 -35 * 326 359 8 23 chr5 136895629 136895757 -66189775 - MER5A DNA MER1_type -5 184 59 219 354 9 62 chr5 136895658 136895771 -66189761 + MER5A DNA MER1_type 47 153 -36 * 10944 173 33 3 chr5 136895772 136896015 -66189517 + L1PA13 LINE L1 3266 3500 -2663 235 0 0 54 chr5 136896015 136896052 -66189480 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 10944 173 33 3 chr5 136896052 136898651 -66186881 + L1PA13 LINE L1 3500 6161 -2 235 269 0 0 chr5 136899445 136899497 -66186035 - MER58 DNA MER1_type -2343 77 26 234 0 0 0 chr5 136899654 136899680 -66185852 + (T)n Simple_repeat Simple_repeat 1 26 0 183 80 0 0 chr5 136901079 136901104 -66184428 + (CA)n Simple_repeat Simple_repeat 1 25 0 188 137 20 0 chr5 136902235 136902286 -66183246 + T-rich Low_complexity Low_complexity 3 54 0 2011 118 3 20 chr5 136902707 136903011 -66182521 - AluSx SINE Alu -13 299 1 43875 42 3 0 chr5 136903013 136909161 -66176371 - L1PA4 LINE L1 0 6155 1 296 333 48 0 chr5 136909519 136909624 -66175908 + MIR3 SINE MIR 78 187 -21 719 269 95 74 chr5 136910153 136910692 -66174840 + L1M4 LINE L1 3187 3736 -2410 603 271 38 58 chr5 136910954 136911301 -66174231 + L1M4 LINE L1 4383 4722 -1424 3434 227 40 10 chr5 136911345 136912931 -66172601 + L1MD1 LINE L1 2015 3645 -2895 1477 139 160 102 chr5 136912934 136913278 -66172254 - MLT2D LTR ERVL -7 457 94 8126 182 33 23 chr5 136913282 136913581 -66171951 + L1PA16 LINE L1 3871 4165 -2395 180 0 0 0 chr5 136913581 136913601 -66171931 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 8126 182 33 23 chr5 136913601 136915950 -66169582 + L1PA16 LINE L1 4165 6556 -4 600 150 9 0 chr5 136915955 136916068 -66169464 - MLT2D LTR ERVL -300 114 1 1594 270 45 30 chr5 136916068 136916734 -66168798 + L1MD1 LINE L1 3641 4316 -2224 4379 197 55 40 chr5 136916737 136918384 -66167148 + L1MD1 LINE L1 4960 6636 0 2628 263 30 30 chr5 136918513 136919388 -66166144 - L1ME3A LINE L1 -22 6148 5274 611 283 11 5 chr5 136919393 136919580 -66165952 - L1M3d LINE L1 -5693 198 11 * 1915 246 99 41 chr5 136919579 136920614 -66164918 - L1ME3A LINE L1 -1320 4826 3731 273 254 0 0 chr5 136920614 136920669 -66164863 + LTR16C LTR ERVL 437 491 0 417 290 15 15 chr5 136921003 136921134 -66164398 - MLT1L LTR MaLR -380 235 105 256 264 110 0 chr5 136921253 136921344 -66164188 + L1M4 LINE L1 3712 3812 -2334 250 269 106 93 chr5 136921416 136921698 -66163834 + L1M4 LINE L1 4826 5116 -1030 1780 124 0 0 chr5 136921698 136921931 -66163601 + AluSq SINE Alu 3 235 -78 250 269 106 93 chr5 136921931 136922046 -66163486 + L1M4 LINE L1 5116 5228 -918 590 189 0 49 chr5 136922059 136922181 -66163351 - FLAM_C SINE Alu -25 118 3 2092 162 63 86 chr5 136923360 136923849 -66161683 - MLT2B1 LTR ERVL -40 480 3 471 224 184 0 chr5 136924373 136924498 -66161034 + MER5A DNA MER1_type 40 187 -2 2181 112 0 0 chr5 136924568 136924872 -66160660 - AluSx SINE Alu 0 304 1 1540 207 3 10 chr5 136924881 136925171 -66160361 - AluJo SINE Alu -24 288 1 265 348 56 0 chr5 136925246 136925335 -66160197 - L2 LINE L2 0 3313 3220 385 230 173 14 chr5 136926370 136926509 -66159023 + MIR SINE MIR 89 249 -13 26 64 0 0 chr5 136926558 136926605 -66158927 + AT_rich Low_complexity Low_complexity 1 47 0 231 36 0 0 chr5 136927253 136927281 -66158251 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 6395 68 0 4 chr5 136927281 136928102 -66157430 - L1PA8 LINE L1 -24 6148 5331 2240 113 3 0 chr5 136932415 136932724 -66152808 + AluSx SINE Alu 1 310 -2 735 168 7 44 chr5 136932883 136933020 -66152512 - AluJb SINE Alu -180 132 1 245 165 39 87 chr5 136933021 136933148 -66152384 + Charlie7 DNA MER1_type 2457 2577 -35 337 231 8 68 chr5 136933346 136933463 -66152069 - L1MEd LINE L1 -5945 174 65 312 237 99 15 chr5 136934172 136934303 -66151229 - L1ME2 LINE L1 -10 6154 6013 309 246 108 39 chr5 136934370 136934500 -66151032 - MLT1L LTR MaLR -11 604 466 250 242 220 0 chr5 136934583 136934674 -66150858 - L2 LINE L2 0 3313 3203 236 370 31 16 chr5 136935068 136935195 -66150337 + MIR3 SINE MIR 15 143 -65 1829 190 83 40 chr5 136935502 136935982 -66149550 + MLT1D LTR MaLR 5 505 0 1908 152 0 16 chr5 136936253 136936562 -66148970 - AluSq SINE Alu -9 304 1 187 277 0 0 chr5 136936987 136937034 -66148498 + L2 LINE L2 3259 3305 -8 790 269 20 0 chr5 136937362 136937563 -66147969 - MER63A DNA MER1_type -5 205 1 294 355 26 59 chr5 136937895 136938320 -66147212 - L1MEc LINE L1 -5951 445 35 1073 182 25 0 chr5 136938340 136938543 -66146989 - Cheshire DNA MER1_type -835 1585 1378 436 246 33 8 chr5 136938562 136938684 -66146848 - Cheshire DNA MER1_type -2266 154 30 596 239 84 0 chr5 136938782 136938937 -66146595 + MIR SINE MIR 39 206 -56 3137 224 22 11 chr5 136939064 136939916 -66145616 - L1M4c LINE L1 -3120 3524 2663 887 270 76 49 chr5 136939920 136940365 -66145167 - MLT1C LTR MaLR -5 462 6 586 210 30 80 chr5 136940376 136940576 -66144956 - MLT1C-int LTR MaLR -5 1730 1541 * 2982 253 62 8 chr5 136940571 136941684 -66143848 - L1M4c LINE L1 -4280 2545 1241 2047 199 39 97 chr5 136941729 136942187 -66143345 - L1MC1 LINE L1 -7 6326 5843 535 108 0 0 chr5 136942187 136942261 -66143271 + THE1C LTR MaLR 1 74 -301 2047 199 39 97 chr5 136942261 136942293 -66143239 - L1MC1 LINE L1 -490 5843 5811 2382 114 16 26 chr5 136942293 136942670 -66142862 + THE1C LTR MaLR 1 373 -2 2047 199 39 97 chr5 136942670 136943316 -66142216 - L1MC1 LINE L1 -522 5811 5189 26 0 0 0 chr5 136943319 136943345 -66142187 + AT_rich Low_complexity Low_complexity 1 26 0 634 258 113 4 chr5 136943345 136943574 -66141958 - L1MA9 LINE L1 -38 6274 6021 251 167 0 19 chr5 136943572 136943626 -66141906 - L1M4c LINE L1 -5305 1237 1185 * 541 272 55 64 chr5 136943713 136944025 -66141507 + HAL1b LINE L1 309 617 -731 349 131 0 16 chr5 136944048 136944109 -66141423 + MER5A DNA MER1_type 35 94 -95 2561 149 17 6 chr5 136944329 136944750 -66140782 - MSTB LTR MaLR 0 414 3 210 118 0 0 chr5 136945487 136945521 -66140011 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1528 172 242 7 chr5 136945693 136946106 -66139426 + LTR54 LTR ERV1 1 510 0 807 326 70 12 chr5 136946310 136946896 -66138636 - L1ME3A LINE L1 -296 5874 5255 260 260 65 0 chr5 136947078 136947155 -66138377 - L1ME3A LINE L1 -1158 4988 4907 555 182 25 16 chr5 136947216 136947337 -66138195 + L2 LINE L2 3191 3312 -1 2036 172 3 12 chr5 136947590 136947927 -66137605 + MER1B DNA MER1_type 4 337 0 239 318 59 0 chr5 136948967 136949052 -66136480 + L2 LINE L2 3141 3230 -42 180 0 0 0 chr5 136950797 136950817 -66134715 + (A)n Simple_repeat Simple_repeat 1 20 0 252 241 0 0 chr5 136951328 136951382 -66134150 - MIR SINE MIR -119 143 90 22 0 0 0 chr5 136951629 136951651 -66133881 + AT_rich Low_complexity Low_complexity 1 22 0 14587 158 57 17 chr5 136952588 136957194 -66128338 + L1MA2 LINE L1 12 4780 -2785 4929 115 33 19 chr5 136957297 136958120 -66127412 + L1MA2 LINE L1 6679 7512 -211 879 72 8 8 chr5 136958120 136958244 -66127288 + L1MA1 LINE L1 6178 6302 0 1414 108 44 8 chr5 136958244 136958491 -66127041 + L1MA2 LINE L1 6045 6304 0 2621 88 8 0 chr5 136958518 136958870 -66126662 + THE1A LTR MaLR 1 355 0 11155 103 9 7 chr5 136958872 136960447 -66125085 + THE1A-int LTR MaLR 3 1580 0 2516 84 3 3 chr5 136960447 136960782 -66124750 + THE1A LTR MaLR 1 335 -20 2037 193 31 78 chr5 136961052 136961633 -66123899 + MLT2B3 LTR ERVL 1 554 0 23 33 0 0 chr5 136962073 136962103 -66123429 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 136962405 136962448 -66123084 + AT_rich Low_complexity Low_complexity 1 43 0 321 271 71 0 chr5 136962538 136962623 -66122909 - L2 LINE L2 0 3313 3223 775 217 40 0 chr5 136962677 136962852 -66122680 + MER96B DNA MER1_type? 2 183 -234 22 35 0 0 chr5 136962877 136962906 -66122626 + AT_rich Low_complexity Low_complexity 1 29 0 1299 298 35 5 chr5 136962991 136963367 -66122165 - LTR16A LTR ERVL -1 449 63 244 302 0 58 chr5 136963463 136963549 -66121983 - L2 LINE L2 -4 3309 3229 596 282 55 25 chr5 136963555 136963757 -66121775 - MIR SINE MIR -14 248 41 592 325 27 13 chr5 136963806 136964184 -66121348 - L1MC/D LINE L1 -862 5507 5368 399 298 162 21 chr5 136964380 136964778 -66120754 - L1MC/D LINE L1 -1107 5108 4637 551 244 151 24 chr5 136965075 136965280 -66120252 - MIR SINE MIR -26 236 6 2831 251 70 19 chr5 136965560 136966686 -66118846 - L1MC/D LINE L1 -1890 4325 3143 256 156 62 0 chr5 136966696 136966760 -66118772 + CT-rich Low_complexity Low_complexity 3 70 0 322 259 53 1 chr5 136966762 136966852 -66118680 - AluJ/FRAM SINE Alu 0 302 220 2355 252 59 13 chr5 136966852 136967700 -66117832 - L1MC/D LINE L1 -3060 3155 2269 790 265 55 22 chr5 136967693 136968059 -66117473 - L1MC/D LINE L1 -5230 1166 789 * 370 311 31 31 chr5 136968296 136968518 -66117014 - L1MC/D LINE L1 -6138 258 37 312 383 30 0 chr5 136968632 136968799 -66116733 - L1 LINE L1 -2391 3755 3584 770 158 0 24 chr5 136968944 136969071 -66116461 - FLAM_C SINE Alu -19 124 1 2086 117 3 13 chr5 136970191 136970498 -66115034 + AluSc SINE Alu 1 304 -5 2142 139 8 19 chr5 136972260 136972619 -66112913 - MER46B DNA MER2_type -2 234 5 370 298 8 50 chr5 136973191 136973312 -66112220 + MIR3 SINE MIR 66 181 -27 413 177 415 7 chr5 136973317 136973464 -66112068 + MIR SINE MIR 7 213 -49 244 253 48 12 chr5 136973597 136973680 -66111852 - MIR SINE MIR -82 180 95 342 190 0 0 chr5 136974206 136974322 -66111210 + (TG)n Simple_repeat Simple_repeat 2 117 0 515 333 61 53 chr5 136975586 136976061 -66109471 + L2 LINE L2 2291 2769 -545 21 0 0 0 chr5 136976650 136976671 -66108861 + AT_rich Low_complexity Low_complexity 1 21 0 454 98 50 42 chr5 136976678 136977191 -66108341 + (TA)n Simple_repeat Simple_repeat 1 516 0 381 114 78 12 chr5 136977217 136977383 -66108149 + (TA)n Simple_repeat Simple_repeat 1 177 0 26 64 0 0 chr5 136977383 136977430 -66108102 + AT_rich Low_complexity Low_complexity 1 47 0 395 118 66 20 chr5 136977430 136977582 -66107950 + (TA)n Simple_repeat Simple_repeat 2 160 0 316 228 38 13 chr5 136977595 136977674 -66107858 - MER5A DNA MER1_type -83 106 26 2180 115 0 0 chr5 136978560 136978856 -66106676 + AluSc SINE Alu 1 296 -13 503 263 138 7 chr5 136980098 136980250 -66105282 + MIR3 SINE MIR 30 201 -7 245 102 23 80 chr5 136980740 136980828 -66104704 + (TCCCC)n Simple_repeat Simple_repeat 3 85 0 192 40 0 0 chr5 136980848 136980873 -66104659 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr5 136982439 136982459 -66103073 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5066 149 9 33 chr5 136984915 136985876 -66099656 - L1MA4 LINE L1 -1 6299 5362 209 176 0 0 chr5 136986260 136986294 -66099238 + CT-rich Low_complexity Low_complexity 2 35 0 327 146 0 0 chr5 136989249 136989304 -66096228 + (GGAGAA)n Simple_repeat Simple_repeat 3 57 0 23 33 0 0 chr5 136992216 136992246 -66093286 + AT_rich Low_complexity Low_complexity 1 30 0 660 319 56 7 chr5 136992345 136992630 -66092902 + MLT1K LTR MaLR 126 424 -164 28 61 0 0 chr5 136992856 136992905 -66092627 + AT_rich Low_complexity Low_complexity 1 49 0 317 43 43 0 chr5 136993274 136993320 -66092212 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 3667 282 96 21 chr5 136996339 136996450 -66089082 + L2 LINE L2 674 775 -2539 1305 166 22 124 chr5 136996450 136996854 -66088678 + MLT1A1 LTR MaLR 3 365 0 3667 282 96 21 chr5 136996854 136998156 -66087376 + L2 LINE L2 775 2193 -1121 5016 185 50 12 chr5 136998201 136999374 -66086158 - L1MC2 LINE L1 -24 6320 5095 9049 206 31 13 chr5 136999391 137000758 -66084774 + L1MA4A LINE L1 912 2254 -4594 2430 129 13 5 chr5 137000758 137001130 -66084402 + THE1C LTR MaLR 1 375 0 9846 128 46 6 chr5 137001130 137002649 -66082883 + THE1C-int LTR MaLR 1 1580 0 2158 151 5 13 chr5 137002649 137003027 -66082505 + THE1C LTR MaLR 1 375 0 9049 206 31 13 chr5 137003027 137005357 -66080175 + L1MA4A LINE L1 2253 4810 -2038 1229 229 69 96 chr5 137005363 137005812 -66079720 - MLT2B3 LTR ERVL 0 554 118 5944 171 48 21 chr5 137005816 137007696 -66077836 + L1MA4A LINE L1 4816 6743 -262 2459 84 0 0 chr5 137007696 137007995 -66077537 + AluY SINE Alu 1 299 -12 5944 171 48 21 chr5 137007995 137008080 -66077452 + L1MA4A LINE L1 6743 6824 -181 452 42 73 0 chr5 137008110 137008206 -66077326 + (TA)n Simple_repeat Simple_repeat 2 104 0 468 142 148 0 chr5 137008245 137008400 -66077132 - Tigger3(Golem) DNA MER2_type -686 2343 2166 3794 139 10 52 chr5 137008551 137009319 -66076213 - L1M1 LINE L1 -1441 6124 5389 7624 189 49 21 chr5 137010919 137011135 -66074397 - L1M1 LINE L1 -2184 5381 5173 2228 119 3 0 chr5 137011135 137011437 -66074095 - AluSp SINE Alu -8 305 3 7624 189 49 21 chr5 137011437 137011500 -66074032 - L1M1 LINE L1 -2392 5173 5113 369 0 0 0 chr5 137011500 137011541 -66073991 + (TG)n Simple_repeat Simple_repeat 2 42 0 7624 189 49 21 chr5 137011541 137013592 -66071940 - L1M1 LINE L1 -2452 5113 2979 6044 107 15 9 chr5 137013592 137014605 -66070927 - L1PA11 LINE L1 -2 6487 5453 453 88 0 121 chr5 137014605 137014696 -66070836 - MADE1 DNA Mariner 0 80 1 6044 107 15 9 chr5 137014696 137015514 -66070018 - L1PA11 LINE L1 -1036 5453 4641 16177 193 16 31 chr5 137015516 137015571 -66069961 - L1PA11 LINE L1 -1921 4540 4486 2375 98 0 3 chr5 137015571 137015877 -66069655 - AluY SINE Alu -6 305 1 16177 193 16 31 chr5 137015877 137018205 -66067327 - L1PA11 LINE L1 -1975 4486 2231 2083 155 0 0 chr5 137018205 137018509 -66067023 + AluSx SINE Alu 1 304 -8 16177 193 16 31 chr5 137018509 137020030 -66065502 - L1PA11 LINE L1 -4230 2231 689 6970 222 30 22 chr5 137020072 137022328 -66063204 - L1M1 LINE L1 -4578 2987 25 423 0 0 0 chr5 137024697 137024744 -66060788 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 26 30 0 0 chr5 137024880 137024913 -66060619 + AT_rich Low_complexity Low_complexity 1 33 0 1125 190 84 15 chr5 137027434 137027697 -66057835 - MLT1D LTR MaLR -2 503 223 4285 167 18 32 chr5 137027728 137028566 -66056966 - LTR1B LTR ERV1 0 826 1 2300 197 34 94 chr5 137029553 137030192 -66055340 - MER77 LTR ERV1 0 605 5 317 339 54 12 chr5 137030537 137030705 -66054827 - MER5B DNA MER1_type 0 178 4 405 275 14 67 chr5 137030757 137030925 -66054607 - MER5B DNA MER1_type 0 178 27 2129 134 129 5 chr5 137031044 137031425 -66054107 + MSTA LTR MaLR 1 428 0 1462 322 84 19 chr5 137031445 137032281 -66053251 - L2 LINE L2 -271 3042 2156 568 262 119 21 chr5 137032335 137032621 -66052911 - L2 LINE L2 -1472 1842 1529 267 245 0 0 chr5 137033209 137033262 -66052270 - L2 LINE L2 -11 3302 3250 524 194 0 19 chr5 137033396 137033504 -66052028 - L1MEc LINE L1 -6271 125 20 245 128 21 0 chr5 137034886 137034933 -66050599 + CT-rich Low_complexity Low_complexity 1 48 0 335 321 45 0 chr5 137037269 137037381 -66048151 - MIR SINE MIR -51 211 95 14361 134 50 3 chr5 137037566 137039875 -66045657 + Tigger1 DNA MER2_type 1 2416 -2 326 288 19 0 chr5 137040320 137040445 -66045087 - L1MC/D LINE L1 -352 5810 5685 243 302 31 23 chr5 137040811 137040940 -66044592 - L1MC/D LINE L1 -527 5594 5465 2171 128 0 0 chr5 137041139 137041445 -66044087 - AluSx SINE Alu -6 306 1 1644 247 64 0 chr5 137041831 137042349 -66043183 - L1MC/D LINE L1 -2099 4047 3497 24 32 0 0 chr5 137042399 137042430 -66043102 + AT_rich Low_complexity Low_complexity 1 31 0 2444 245 77 27 chr5 137042431 137043503 -66042029 - L1MC/D LINE L1 -2769 3377 2252 280 390 30 0 chr5 137044464 137044628 -66040904 + MIR SINE MIR 5 173 -89 288 319 25 42 chr5 137044674 137044793 -66040739 - L2 LINE L2 -12 3260 3144 286 246 66 78 chr5 137044861 137044920 -66040612 - HAL1b LINE L1 -7 1341 1283 2393 164 60 2 chr5 137044920 137045352 -66040180 - MSTB2 LTR MaLR 0 457 1 286 246 66 78 chr5 137045352 137045536 -66039996 - HAL1b LINE L1 -65 1283 1101 904 144 0 0 chr5 137045536 137045668 -66039864 + AluY SINE Alu 1 132 -179 727 257 111 17 chr5 137045805 137046167 -66039365 - HAL1b LINE L1 -235 1113 718 248 299 0 0 chr5 137046824 137046911 -66038621 + L1MCc LINE L1 1376 1462 -4961 216 0 0 0 chr5 137047496 137047520 -66038012 + (T)n Simple_repeat Simple_repeat 1 24 0 244 232 0 18 chr5 137047629 137047685 -66037847 - L2 LINE L2 0 3313 3259 234 0 0 0 chr5 137047927 137047953 -66037579 + (TG)n Simple_repeat Simple_repeat 2 27 0 741 201 16 11 chr5 137049039 137049223 -66036309 + MER53 DNA DNA 2 186 -3 21 0 0 0 chr5 137050249 137050270 -66035262 + AT_rich Low_complexity Low_complexity 1 21 0 626 240 51 65 chr5 137050984 137051291 -66034241 + MER39 LTR ERV1 1 517 -190 284 117 17 17 chr5 137051456 137051516 -66034016 - Tigger3(Golem) DNA MER2_type -2694 335 276 497 248 0 0 chr5 137051517 137051618 -66033914 - Tigger3(Golem) DNA MER2_type -2928 101 1 2076 215 29 42 chr5 137051625 137052220 -66033312 - L1M4 LINE L1 -1743 4403 3817 421 255 273 9 chr5 137052238 137052454 -66033078 + L2 LINE L2 2202 2474 -840 326 234 36 72 chr5 137052811 137052922 -66032610 - MER94 DNA DNA -20 114 8 257 167 36 12 chr5 137053336 137053420 -66032112 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 203 65 43 43 chr5 137053434 137053480 -66032052 + (CAATA)n Simple_repeat Simple_repeat 2 47 0 913 195 0 68 chr5 137054270 137054460 -66031072 - MER63A DNA MER1_type -33 177 1 10867 230 30 31 chr5 137055838 137057626 -66027906 + L1PA13 LINE L1 1120 2908 -3889 4529 97 37 17 chr5 137057626 137058279 -66027253 + L1MA1 LINE L1 5633 6298 -4 10867 230 30 31 chr5 137058279 137060155 -66025377 + L1PA13 LINE L1 2908 4789 -2008 360 0 0 0 chr5 137060836 137060876 -66024656 + (TG)n Simple_repeat Simple_repeat 2 41 0 2436 94 0 0 chr5 137061828 137062135 -66023397 - AluSg SINE Alu -3 307 1 2210 165 25 37 chr5 137062352 137062753 -66022779 + MSTD LTR MaLR 1 396 0 364 319 51 22 chr5 137063616 137063754 -66021778 + L2 LINE L2 3119 3260 -12 23 0 0 0 chr5 137064509 137064532 -66021000 + AT_rich Low_complexity Low_complexity 1 23 0 2217 84 3 11 chr5 137066894 137067181 -66018351 - AluSp SINE Alu -28 285 1 2379 97 0 0 chr5 137067339 137067638 -66017894 - AluSg1 SINE Alu -10 299 1 319 337 77 12 chr5 137067845 137068014 -66017518 - L3b LINE CR1 -118 1465 1286 239 361 33 0 chr5 137070850 137070972 -66014560 - L2 LINE L2 0 3272 3147 872 183 73 6 chr5 137071771 137071935 -66013597 - AluJb SINE Alu -137 175 1 2175 104 7 0 chr5 137072314 137072602 -66012930 + AluSg SINE Alu 1 290 -20 216 132 66 26 chr5 137072729 137072805 -66012727 + (TA)n Simple_repeat Simple_repeat 1 79 0 1676 146 38 11 chr5 137072944 137073235 -66012297 - AluSx SINE Alu 0 308 11 585 225 179 0 chr5 137073262 137073435 -66012097 - L1ME LINE L1 -307 5814 5611 1544 159 33 22 chr5 137073468 137073739 -66011793 + AluJo SINE Alu 21 294 -18 1721 101 40 29 chr5 137073741 137074018 -66011514 + AluY SINE Alu 1 280 -31 288 0 0 0 chr5 137074021 137074053 -66011479 + (TA)n Simple_repeat Simple_repeat 2 33 0 368 288 98 28 chr5 137074053 137074268 -66011264 + L1ME4a LINE L1 5650 5879 -242 352 249 79 6 chr5 137074286 137074451 -66011081 + L1ME4a LINE L1 5931 6107 -14 2338 91 0 13 chr5 137074493 137074800 -66010732 + AluSg SINE Alu 1 303 -7 851 363 4 34 chr5 137076342 137076807 -66008725 - L1M3a LINE L1 -5504 451 1 1590 177 108 69 chr5 137076954 137077390 -66008142 + MLT1D LTR MaLR 48 500 -5 532 286 43 0 chr5 137077458 137077643 -66007889 + L1ME4a LINE L1 5677 5869 -252 1195 256 113 14 chr5 137078371 137078735 -66006797 + MLT1G1 LTR MaLR 194 593 -2 805 209 50 45 chr5 137079291 137079511 -66006021 + MLT1K LTR MaLR 359 579 -9 322 239 197 0 chr5 137079915 137080032 -66005500 - MIR SINE MIR 0 262 123 435 319 42 16 chr5 137130080 137130271 -65955261 + HAL1b LINE L1 413 608 -740 349 131 0 16 chr5 137130302 137130363 -65955169 + MER5A DNA MER1_type 35 94 -95 2561 149 17 6 chr5 137130585 137131006 -65954526 - MSTB LTR MaLR 0 414 3 208 147 0 0 chr5 137131742 137131776 -65953756 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1528 172 242 7 chr5 137131948 137132361 -65953171 + LTR54 LTR ERV1 1 510 0 790 328 70 12 chr5 137132565 137133151 -65952381 - L1ME3A LINE L1 -296 5874 5255 260 260 65 0 chr5 137133333 137133410 -65952122 - L1ME3A LINE L1 -1158 4988 4907 555 182 25 16 chr5 137133471 137133592 -65951940 + L2 LINE L2 3191 3312 -1 2011 175 3 12 chr5 137133845 137134182 -65951350 + MER1B DNA MER1_type 4 337 0 239 318 59 0 chr5 137135224 137135309 -65950223 + L2 LINE L2 3141 3230 -42 180 0 0 0 chr5 137137054 137137074 -65948458 + (A)n Simple_repeat Simple_repeat 1 20 0 252 241 0 0 chr5 137137585 137137639 -65947893 - MIR SINE MIR -119 143 90 22 0 0 0 chr5 137137886 137137908 -65947624 + AT_rich Low_complexity Low_complexity 1 22 0 19826 170 50 15 chr5 137139187 137143837 -65941695 + L1MA2 LINE L1 12 4823 -2742 5060 165 20 55 chr5 137143832 137145779 -65939753 + L1MA2 LINE L1 5708 7512 -211 * 927 56 8 8 chr5 137145779 137145903 -65939629 + L1MA1 LINE L1 6178 6302 0 1439 104 44 8 chr5 137145903 137146150 -65939382 + L1MA2 LINE L1 6045 6304 0 2621 88 8 0 chr5 137146178 137146530 -65939002 + THE1A LTR MaLR 1 355 0 6901 185 57 53 chr5 137146530 137148175 -65937357 + MST-int LTR MaLR 1 1651 0 2546 84 3 0 chr5 137148175 137148509 -65937023 + THE1A LTR MaLR 1 335 -20 1461 321 24 83 chr5 137148779 137149368 -65936164 + MLT2B3 LTR ERVL 1 554 0 23 33 0 0 chr5 137149808 137149838 -65935694 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 137150140 137150183 -65935349 + AT_rich Low_complexity Low_complexity 1 43 0 321 271 71 0 chr5 137150273 137150358 -65935174 - L2 LINE L2 0 3313 3223 775 217 40 0 chr5 137150412 137150587 -65934945 + MER96B DNA MER1_type? 2 183 -234 22 35 0 0 chr5 137150612 137150641 -65934891 + AT_rich Low_complexity Low_complexity 1 29 0 1299 298 35 5 chr5 137150726 137151102 -65934430 - LTR16A LTR ERVL -1 449 63 244 302 0 58 chr5 137151198 137151284 -65934248 - L2 LINE L2 -4 3309 3229 596 282 55 25 chr5 137151290 137151492 -65934040 - MIR SINE MIR -14 248 41 592 325 27 13 chr5 137151541 137151919 -65933613 - L1MC/D LINE L1 -862 5507 5368 23 33 0 0 chr5 137152104 137152134 -65933398 + AT_rich Low_complexity Low_complexity 1 30 0 399 250 10 0 chr5 137152413 137152513 -65933019 - L1MC/D LINE L1 -1478 4737 4637 551 244 151 24 chr5 137152810 137153015 -65932517 - MIR SINE MIR -26 236 6 2814 251 71 20 chr5 137153295 137154420 -65931112 - L1MC/D LINE L1 -1890 4325 3143 256 156 62 0 chr5 137154430 137154494 -65931038 + CT-rich Low_complexity Low_complexity 3 70 0 322 259 53 1 chr5 137154496 137154586 -65930946 - AluJ/FRAM SINE Alu 0 302 220 2542 259 60 2 chr5 137154586 137155425 -65930107 - L1MC/D LINE L1 -3060 3155 2269 809 262 55 22 chr5 137155418 137155784 -65929748 - L1MC/D LINE L1 -5230 1166 789 * 370 311 31 31 chr5 137156021 137156243 -65929289 - L1MC/D LINE L1 -6138 258 37 315 387 24 0 chr5 137156357 137156525 -65929007 - L1 LINE L1 -2391 3755 3584 770 158 0 24 chr5 137156672 137156799 -65928733 - FLAM_C SINE Alu -19 124 1 2086 117 3 13 chr5 137157919 137158226 -65927306 + AluSc SINE Alu 1 304 -5 2142 139 8 19 chr5 137159988 137160347 -65925185 - MER46B DNA MER2_type -2 234 5 370 298 8 50 chr5 137160919 137161040 -65924492 + MIR3 SINE MIR 66 181 -27 413 177 415 7 chr5 137161045 137161192 -65924340 + MIR SINE MIR 7 213 -49 244 253 48 12 chr5 137161325 137161408 -65924124 - MIR SINE MIR -82 180 95 324 193 0 0 chr5 137161934 137162048 -65923484 + (TG)n Simple_repeat Simple_repeat 2 115 0 515 333 61 53 chr5 137163334 137163809 -65921723 + L2 LINE L2 2291 2769 -545 21 71 0 0 chr5 137164400 137164442 -65921090 + AT_rich Low_complexity Low_complexity 1 42 0 420 116 50 28 chr5 137164444 137164735 -65920797 + (TA)n Simple_repeat Simple_repeat 1 297 0 405 65 43 75 chr5 137164754 137164940 -65920592 + (TA)n Simple_repeat Simple_repeat 1 180 0 343 104 75 35 chr5 137164966 137165139 -65920393 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 54 0 0 chr5 137165140 137165177 -65920355 + AT_rich Low_complexity Low_complexity 1 37 0 395 118 66 20 chr5 137165177 137165329 -65920203 + (TA)n Simple_repeat Simple_repeat 1 159 0 316 228 38 13 chr5 137165342 137165421 -65920111 - MER5A DNA MER1_type -83 106 26 2166 118 0 0 chr5 137166320 137166617 -65918915 + AluSc SINE Alu 1 297 -12 503 263 138 7 chr5 137167858 137168010 -65917522 + MIR3 SINE MIR 30 201 -7 237 65 0 0 chr5 137168478 137168509 -65917023 + (TCCCC)n Simple_repeat Simple_repeat 3 33 0 220 77 0 96 chr5 137168512 137168564 -65916968 + (TCCCG)n Simple_repeat Simple_repeat 5 51 0 311 94 0 19 chr5 137168573 137168626 -65916906 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 180 0 0 0 chr5 137170192 137170212 -65915320 + (TTG)n Simple_repeat Simple_repeat 2 21 0 22 0 0 0 chr5 137171763 137171785 -65913747 + AT_rich Low_complexity Low_complexity 1 22 0 6792 149 23 44 chr5 137172663 137175046 -65910486 - L1MA4 LINE L1 -1 7718 5389 7612 190 49 21 chr5 137176646 137176862 -65908670 - L1MA4 LINE L1 -2184 5381 5173 2228 119 3 0 chr5 137176862 137177164 -65908368 - AluSp SINE Alu -8 305 3 7612 190 49 21 chr5 137177164 137177227 -65908305 - L1MA4 LINE L1 -2392 5173 5113 369 0 0 0 chr5 137177227 137177268 -65908264 + (TG)n Simple_repeat Simple_repeat 2 42 0 7612 190 49 21 chr5 137177268 137179319 -65906213 - L1MA4 LINE L1 -2452 5113 2979 6058 146 10 6 chr5 137179319 137180332 -65905200 - L1PA11 LINE L1 -2 6487 5455 453 88 0 121 chr5 137180332 137180423 -65905109 - MADE1 DNA Mariner 0 80 1 6058 146 10 6 chr5 137180423 137181242 -65904290 - L1PA11 LINE L1 -1034 5455 4641 16142 193 17 31 chr5 137181244 137181299 -65904233 - L1PA11 LINE L1 -1921 4540 4486 2375 98 0 3 chr5 137181299 137181605 -65903927 - AluY SINE Alu -6 305 1 16142 193 17 31 chr5 137181605 137183932 -65901600 - L1PA11 LINE L1 -1975 4486 2230 2070 155 0 0 chr5 137183932 137184236 -65901296 + AluSx SINE Alu 1 304 -8 16142 193 17 31 chr5 137184236 137185757 -65899775 - L1PA11 LINE L1 -4231 2230 689 6996 222 30 22 chr5 137185800 137188056 -65897476 - L1M1 LINE L1 -4578 2987 25 459 0 0 0 chr5 137190425 137190476 -65895056 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 26 30 0 0 chr5 137190612 137190645 -65894887 + AT_rich Low_complexity Low_complexity 1 33 0 1125 190 84 15 chr5 137193166 137193429 -65892103 - MLT1D LTR MaLR -2 503 223 4298 166 18 32 chr5 137193460 137194298 -65891234 - LTR1B LTR ERV1 0 826 1 2300 197 34 94 chr5 137195285 137195924 -65889608 - MER77 LTR ERV1 0 605 5 300 337 53 18 chr5 137196269 137196438 -65889094 - MER5B DNA MER1_type 0 178 4 342 261 133 55 chr5 137196490 137196655 -65888877 - MER5B DNA MER1_type 0 178 1 2129 134 129 5 chr5 137196777 137197158 -65888374 + MSTA LTR MaLR 1 428 0 1462 322 84 19 chr5 137197178 137198014 -65887518 - L2 LINE L2 -271 3042 2156 568 262 119 21 chr5 137198068 137198354 -65887178 - L2 LINE L2 -1472 1842 1529 267 245 0 0 chr5 137198942 137198995 -65886537 - L2 LINE L2 -11 3302 3250 524 194 0 19 chr5 137199129 137199237 -65886295 - L1MEc LINE L1 -6271 125 20 263 122 20 0 chr5 137200619 137200668 -65884864 + CT-rich Low_complexity Low_complexity 1 50 0 335 321 45 0 chr5 137203004 137203116 -65882416 - MIR SINE MIR -51 211 95 14361 134 50 3 chr5 137203301 137205610 -65879922 + Tigger1 DNA MER2_type 1 2416 -2 326 288 19 0 chr5 137206055 137206180 -65879352 - L1MC/D LINE L1 -352 5810 5685 243 302 31 23 chr5 137206546 137206675 -65878857 - L1MC/D LINE L1 -527 5594 5465 1233 145 0 26 chr5 137206874 137207102 -65878430 - AluSg/x SINE Alu -6 306 85 1644 247 64 0 chr5 137207641 137208159 -65877373 - L1MC/D LINE L1 -2099 4047 3497 24 32 0 0 chr5 137208209 137208240 -65877292 + AT_rich Low_complexity Low_complexity 1 31 0 2483 245 76 27 chr5 137208241 137209314 -65876218 - L1MC/D LINE L1 -2769 3377 2252 280 390 30 0 chr5 137210275 137210439 -65875093 + MIR SINE MIR 5 173 -89 288 319 25 42 chr5 137210485 137210604 -65874928 - L2 LINE L2 -12 3260 3144 954 259 86 50 chr5 137210672 137210731 -65874801 - HAL1b LINE L1 -7 1341 1286 2410 162 60 2 chr5 137210731 137211163 -65874369 - MSTB2 LTR MaLR 0 457 1 954 259 86 50 chr5 137211163 137211347 -65874185 - HAL1b LINE L1 -62 1286 1110 1645 119 68 58 chr5 137211347 137211658 -65873874 + AluY SINE Alu 1 314 0 954 259 86 50 chr5 137211658 137212012 -65873520 - HAL1b LINE L1 -238 1110 718 248 299 0 0 chr5 137212669 137212756 -65872776 + L1MCc LINE L1 1376 1462 -4961 225 0 0 0 chr5 137213340 137213365 -65872167 + (T)n Simple_repeat Simple_repeat 1 25 0 292 237 31 93 chr5 137213474 137213571 -65871961 - L2 LINE L2 0 3272 3182 216 0 0 0 chr5 137213773 137213797 -65871735 + (TG)n Simple_repeat Simple_repeat 2 25 0 664 195 9 163 chr5 137214219 137214434 -65871098 - MER5A DNA MER1_type -6 183 2 1614 166 0 4 chr5 137214699 137214958 -65870574 + AluJo SINE Alu 37 294 -18 22 35 0 0 chr5 137215042 137215071 -65870461 + AT_rich Low_complexity Low_complexity 1 29 0 219 309 24 98 chr5 137215196 137215319 -65870213 + MER5A DNA MER1_type 76 189 0 720 206 16 11 chr5 137215978 137216162 -65869370 + MER53 DNA DNA 2 186 -3 21 0 0 0 chr5 137217197 137217218 -65868314 + AT_rich Low_complexity Low_complexity 1 21 0 1163 221 42 74 chr5 137217932 137218399 -65867133 + MER39 LTR ERV1 1 666 -41 360 0 0 0 chr5 137218915 137218955 -65866577 + (TG)n Simple_repeat Simple_repeat 2 41 0 2423 94 0 0 chr5 137219907 137220214 -65865318 - AluSg SINE Alu -3 307 1 2027 165 25 37 chr5 137220431 137220832 -65864700 + MSTD LTR MaLR 1 396 0 377 319 51 22 chr5 137221695 137221833 -65863699 + L2 LINE L2 3119 3260 -12 23 0 0 0 chr5 137222588 137222611 -65862921 + AT_rich Low_complexity Low_complexity 1 23 0 209 176 0 0 chr5 137225092 137225126 -65860406 + CT-rich Low_complexity Low_complexity 2 35 0 327 146 0 0 chr5 137228080 137228135 -65857397 + (GGAGAA)n Simple_repeat Simple_repeat 3 57 0 23 33 0 0 chr5 137231047 137231077 -65854455 + AT_rich Low_complexity Low_complexity 1 30 0 660 319 56 7 chr5 137231175 137231460 -65854072 + MLT1K LTR MaLR 126 424 -164 28 61 0 0 chr5 137231686 137231735 -65853797 + AT_rich Low_complexity Low_complexity 1 49 0 317 43 43 0 chr5 137232104 137232150 -65853382 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 3724 282 96 20 chr5 137235171 137235282 -65850250 + L2 LINE L2 674 775 -2539 1305 166 22 124 chr5 137235282 137235686 -65849846 + MLT1A1 LTR MaLR 3 365 0 3724 282 96 20 chr5 137235686 137236987 -65848545 + L2 LINE L2 775 2193 -1121 5014 185 50 12 chr5 137237032 137238205 -65847327 - L1MC2 LINE L1 -24 6320 5095 8987 205 31 13 chr5 137238222 137239588 -65845944 + L1MA4A LINE L1 912 2252 -4596 2430 129 13 5 chr5 137239588 137239960 -65845572 + THE1C LTR MaLR 1 375 0 9860 128 46 5 chr5 137239960 137241478 -65844054 + THE1C-int LTR MaLR 1 1580 0 2158 151 5 13 chr5 137241478 137241856 -65843676 + THE1C LTR MaLR 1 375 0 8987 205 31 13 chr5 137241856 137244185 -65841347 + L1MA4A LINE L1 2251 4810 -2038 1229 229 69 96 chr5 137244191 137244640 -65840892 - MLT2B3 LTR ERVL 0 554 118 5999 170 48 21 chr5 137244644 137246525 -65839007 + L1MA4A LINE L1 4816 6743 -262 2459 84 0 0 chr5 137246525 137246824 -65838708 + AluY SINE Alu 1 299 -12 5999 170 48 21 chr5 137246824 137246909 -65838623 + L1MA4A LINE L1 6743 6824 -181 452 42 73 0 chr5 137246939 137247035 -65838497 + (TA)n Simple_repeat Simple_repeat 2 104 0 1647 135 15 4 chr5 137247075 137247342 -65838190 - Tigger3b DNA MER2_type -686 545 276 497 248 0 0 chr5 137247343 137247444 -65838088 - Tigger3b DNA MER2_type -1130 101 1 2076 215 29 42 chr5 137247451 137248046 -65837486 - L1MC2 LINE L1 -1743 4403 3817 421 255 273 9 chr5 137248064 137248280 -65837252 + L2 LINE L2 2202 2474 -840 326 234 36 72 chr5 137248637 137248748 -65836784 - MER94 DNA DNA -20 114 8 257 167 36 12 chr5 137249162 137249246 -65836286 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 203 65 43 43 chr5 137249260 137249306 -65836226 + (CAATA)n Simple_repeat Simple_repeat 2 47 0 913 195 0 68 chr5 137250096 137250286 -65835246 - MER63A DNA MER1_type -33 177 1 10029 232 30 31 chr5 137251664 137253453 -65832079 + L1PA15 LINE L1 1120 2914 -3883 4251 96 35 17 chr5 137253453 137254107 -65831425 + L1MA1 LINE L1 5633 6298 -4 10029 232 30 31 chr5 137254107 137255878 -65829654 + L1PA15 LINE L1 2914 4685 -2112 3333 143 16 2 chr5 137255978 137257227 -65828305 + L1PA15 LINE L1 5444 6816 0 326 253 179 19 chr5 137258256 137258412 -65827120 + MIR SINE MIR 41 218 -44 871 224 18 46 chr5 137258682 137258901 -65826631 - MER20 DNA MER1_type 0 219 7 234 270 32 0 chr5 137258924 137258987 -65826545 - MER5B DNA MER1_type -86 92 28 3510 130 11 33 chr5 137259596 137259852 -65825680 - L1MA4 LINE L1 -7 6293 6033 2357 100 0 0 chr5 137259852 137260161 -65825371 - AluSg SINE Alu -1 309 1 3510 130 11 33 chr5 137260161 137260535 -65824997 - L1MA4 LINE L1 -267 6033 5677 4836 195 34 16 chr5 137260540 137262005 -65823527 - L1 LINE L1 -2975 4590 3098 3620 233 50 27 chr5 137262019 137262180 -65823352 - L1 LINE L1 -4542 3023 2867 210 37 0 0 chr5 137262180 137262207 -65823325 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3620 233 50 27 chr5 137262207 137262354 -65823178 - L1 LINE L1 -4698 2867 2725 2197 114 3 7 chr5 137262354 137262661 -65822871 - AluSq SINE Alu -7 306 1 3620 233 50 27 chr5 137262661 137263438 -65822094 - L1 LINE L1 -4840 2725 1912 872 363 4 34 chr5 137264174 137264639 -65820893 - L1 LINE L1 -5504 1982 1532 1558 184 108 69 chr5 137264786 137265222 -65820310 + MLT1D LTR MaLR 48 500 -5 498 286 43 0 chr5 137265290 137265475 -65820057 + L1ME4a LINE L1 5677 5869 -252 1191 256 113 14 chr5 137266203 137266567 -65818965 + MLT1G1 LTR MaLR 194 593 -2 783 209 50 45 chr5 137267122 137267342 -65818190 + MLT1K LTR MaLR 359 579 -9 181 350 70 40 chr5 137267561 137267661 -65817871 + L2 LINE L2 3154 3256 -16 479 277 112 53 chr5 137267746 137267952 -65817580 - MIR SINE MIR 0 262 45 404 274 73 16 chr5 137269070 137269194 -65816338 + L2 LINE L2 3142 3272 0 1694 167 33 0 chr5 137270716 137270991 -65814541 - AluJo SINE Alu -20 292 9 1388 181 85 34 chr5 137271036 137271389 -65814143 - MLT1A2 LTR MaLR 0 374 4 1104 318 80 8 chr5 137271642 137272019 -65813513 + MER115 DNA AcHobo 290 693 0 265 337 42 16 chr5 137272505 137272533 -65812999 - L1MA6 LINE L1 -375 5925 5898 605 328 45 28 chr5 137272533 137273000 -65812532 - L1ME3A LINE L1 -273 5897 5423 230 208 0 57 chr5 137273191 137273244 -65812288 - L2 LINE L2 0 3272 3223 347 343 12 6 chr5 137273350 137273516 -65812016 + CT-rich Low_complexity Low_complexity 2 168 0 489 237 164 13 chr5 137276522 137276674 -65808858 + MER5A DNA MER1_type 9 183 -6 1395 168 13 38 chr5 137276802 137277118 -65808414 - MER33 DNA MER1_type 0 324 17 211 284 27 27 chr5 137277244 137277318 -65808214 - L2 LINE L2 -21 3251 3178 1219 220 57 102 chr5 137277642 137278183 -65807349 - L1MC4 LINE L1 -62 7980 7464 576 350 44 34 chr5 137278217 137278600 -65806932 - LTR33 LTR ERVL -134 387 1 370 263 112 39 chr5 137278753 137278788 -65806744 - L2 LINE L2 -527 2787 2756 2449 7 0 7 chr5 137278788 137279058 -65806474 - AluYb8 SINE Alu -12 306 39 370 263 112 39 chr5 137279058 137279201 -65806331 - L2 LINE L2 -558 2756 2596 27 0 0 0 chr5 137280945 137280972 -65804560 + AT_rich Low_complexity Low_complexity 1 27 0 184 398 19 10 chr5 137281561 137281664 -65803868 - L2 LINE L2 0 3272 3169 1583 281 79 14 chr5 137282574 137283129 -65802403 - MLT2E LTR ERVL -14 614 24 946 150 198 10 chr5 137283535 137283863 -65801669 + LTR29 LTR ERV1 1 424 -198 784 160 57 29 chr5 137283857 137283934 -65801598 + LTR49 LTR ERV1 416 489 -106 * 216 0 0 0 chr5 137283934 137283958 -65801574 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 784 160 57 29 chr5 137283958 137284055 -65801477 + LTR49 LTR ERV1 489 595 0 22 35 0 0 chr5 137285639 137285668 -65799864 + AT_rich Low_complexity Low_complexity 1 29 0 2094 103 31 7 chr5 137288729 137289019 -65796513 + AluSx SINE Alu 2 298 -14 2298 97 0 0 chr5 137289296 137289594 -65795938 + AluSx SINE Alu 1 298 -14 25 31 0 0 chr5 137290371 137290403 -65795129 + AT_rich Low_complexity Low_complexity 1 32 0 695 266 75 13 chr5 137291448 137291674 -65793858 - MIR SINE MIR -22 240 1 658 195 146 12 chr5 137292417 137292581 -65792951 + MIR SINE MIR 72 257 -5 646 211 77 13 chr5 137295446 137295602 -65789930 - L2 LINE L2 -2 3311 3146 23 33 0 0 chr5 137295602 137295632 -65789900 + AT_rich Low_complexity Low_complexity 1 30 0 302 283 67 33 chr5 137295655 137295765 -65789767 - HAL1b LINE L1 -553 795 690 2176 120 3 3 chr5 137295765 137296073 -65789459 - AluSq SINE Alu -5 308 1 302 283 67 33 chr5 137296073 137296157 -65789375 - HAL1b LINE L1 -658 690 589 2141 82 0 0 chr5 137296157 137296426 -65789106 + AluSx SINE Alu 41 309 -3 302 283 67 33 chr5 137296426 137296470 -65789062 - HAL1b LINE L1 -759 589 548 250 218 40 50 chr5 137296483 137296584 -65788948 - LTR33A LTR ERVL -4 519 420 846 271 40 74 chr5 137297172 137297503 -65788029 + MLT1I LTR MaLR 98 400 -9 2765 126 24 5 chr5 137297526 137297946 -65787586 + MSTA LTR MaLR 1 428 0 278 337 22 0 chr5 137298190 137298282 -65787250 + L2 LINE L2 3179 3272 0 2151 119 0 0 chr5 137298422 137298715 -65786817 - AluSx SINE Alu -19 293 1 528 290 27 85 chr5 137299028 137299321 -65786211 + Charlie8 DNA MER1_type 1 276 -2141 1528 280 46 40 chr5 137299361 137299904 -65785628 + MLT1E LTR MaLR 43 588 -5 694 295 40 13 chr5 137300421 137300846 -65784686 + L1MDa LINE L1 1637 2087 -4453 315 341 43 33 chr5 137300868 137301079 -65784453 + L1MDa LINE L1 2197 2409 -4312 14416 178 40 10 chr5 137301626 137303695 -65781837 + L1MA4 LINE L1 3428 5433 -2286 2192 111 3 3 chr5 137303695 137304002 -65781530 + AluSc SINE Alu 1 307 -2 14416 178 40 10 chr5 137304002 137306084 -65779448 + L1MA4 LINE L1 5433 7713 -6 1977 125 4 4 chr5 137306326 137306651 -65778881 + AluSg SINE Alu 1 325 0 758 285 16 5 chr5 137307063 137307106 -65778426 + MER58A DNA MER1_type 1 42 -2378 2204 102 3 0 chr5 137307106 137307400 -65778132 - AluSp SINE Alu -18 295 1 758 285 16 5 chr5 137307400 137307549 -65777983 + MER58A DNA MER1_type 42 195 -29 991 236 105 48 chr5 137307549 137307922 -65777610 - MSTD LTR MaLR 0 396 3 1715 163 7 3 chr5 137307933 137308222 -65777310 - MSTD-int LTR MaLR -9 1726 1437 333 326 29 40 chr5 137308462 137308637 -65776895 - MIR3 SINE MIR -5 203 31 23 0 0 0 chr5 137308922 137308945 -65776587 + AT_rich Low_complexity Low_complexity 1 23 0 213 250 125 12 chr5 137308974 137309054 -65776478 - MIR SINE MIR -74 188 100 219 196 0 22 chr5 137311638 137311684 -65773848 + L2 LINE L2 3269 3313 0 180 0 0 0 chr5 137312277 137312297 -65773235 + (TAA)n Simple_repeat Simple_repeat 1 20 0 735 255 236 15 chr5 137313851 137314177 -65771355 + L2 LINE L2 2910 3307 -6 2036 171 9 12 chr5 137314845 137315105 -65770427 + MER2 DNA MER2_type 1 261 -84 4789 60 3 0 chr5 137315105 137315706 -65769826 - L1PA8 LINE L1 -6 6166 5564 2036 171 9 12 chr5 137315706 137315791 -65769741 + MER2 DNA MER2_type 261 345 0 23 0 0 0 chr5 137315931 137315954 -65769578 + AT_rich Low_complexity Low_complexity 1 23 0 2862 121 11 25 chr5 137316606 137317046 -65768486 + MER57B LTR ERV1 1 434 0 1105 221 55 35 chr5 137317222 137317588 -65767944 + MER114 LTR ERV 33 405 -243 1041 250 39 27 chr5 137317631 137317967 -65767565 + L1MC4 LINE L1 7554 7893 -149 271 281 11 11 chr5 137317967 137318056 -65767476 + GA-rich Low_complexity Low_complexity 1 89 0 362 216 35 43 chr5 137318059 137318175 -65767357 + L1MC4 LINE L1 7918 8032 -10 353 240 30 0 chr5 137318222 137318322 -65767210 + MER114 LTR ERV 441 543 -105 427 321 46 54 chr5 137319297 137319537 -65765995 - MIR SINE MIR -10 252 15 303 374 40 29 chr5 137319772 137319946 -65765586 - L3 LINE CR1 -160 1417 1242 196 246 62 0 chr5 137320442 137320507 -65765025 + MIR SINE MIR 183 251 -11 183 250 0 0 chr5 137320533 137320569 -65764963 - MIR SINE MIR -136 126 91 276 253 63 20 chr5 137321054 137321194 -65764338 + MIR SINE MIR 34 262 0 1560 264 80 39 chr5 137324738 137325159 -65760373 + L1M4 LINE L1 875 1277 -5469 6342 103 2 1 chr5 137325159 137326291 -65759241 + L1PA13 LINE L1 5030 6163 0 1560 264 80 39 chr5 137326291 137326710 -65758822 + L1M4 LINE L1 1277 1904 -4842 1047 151 60 0 chr5 137326713 137326898 -65758634 + MER47A DNA MER2_type 2 197 -169 27 0 0 0 chr5 137328673 137328700 -65756832 + AT_rich Low_complexity Low_complexity 1 27 0 27 62 0 0 chr5 137328878 137328926 -65756606 + AT_rich Low_complexity Low_complexity 1 48 0 307 178 37 9 chr5 137329036 137329143 -65756389 + GA-rich Low_complexity Low_complexity 1 110 0 1666 184 28 33 chr5 137329218 137329610 -65755922 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 137329782 137329804 -65755728 + AT_rich Low_complexity Low_complexity 1 22 0 5018 148 36 21 chr5 137329804 137330453 -65755079 - L1MA7 LINE L1 -61 6230 5557 1810 132 19 62 chr5 137330453 137330824 -65754708 + THE1A LTR MaLR 1 355 0 5018 148 36 21 chr5 137330824 137331239 -65754293 - L1MA7 LINE L1 -734 5557 5150 2553 61 0 0 chr5 137331301 137331612 -65753920 - AluY SINE Alu 0 311 1 243 0 0 0 chr5 137331728 137331755 -65753777 + (CA)n Simple_repeat Simple_repeat 1 27 0 7881 126 19 22 chr5 137331755 137331846 -65753686 + HSMAR2 DNA Mariner 6 96 -1206 1986 93 21 3 chr5 137331846 137332135 -65753397 - AluY SINE Alu -17 294 1 7881 126 19 22 chr5 137332135 137333334 -65752198 + HSMAR2 DNA Mariner 96 1292 -10 1665 175 50 25 chr5 137333393 137333753 -65751779 - L1PA13 LINE L1 -12 6151 5783 524 283 66 36 chr5 137333813 137334177 -65751355 - L1MEc LINE L1 -4630 2492 2118 5039 252 49 37 chr5 137334189 137335244 -65750288 - L1M4 LINE L1 -1138 5008 3968 234 0 0 0 chr5 137335244 137335270 -65750262 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1474 234 6 0 chr5 137335270 137335591 -65749941 - L1PB4 LINE L1 -14 6142 5820 5039 252 49 37 chr5 137335591 137336631 -65748901 - L1M4 LINE L1 -2177 3969 2886 249 331 28 14 chr5 137336860 137337005 -65748527 - L1MEc LINE L1 -5148 1275 1129 19445 103 19 26 chr5 137337592 137340588 -65744944 - HUERS-P3b LTR ERV1 -1372 6046 3073 2043 207 32 18 chr5 137340588 137341023 -65744509 + LTR8 LTR ERV1 1 441 -250 3725 90 2 4 chr5 137341023 137341521 -65744011 - HUERS-P3 LTR ERV1 -4776 2642 2146 375 106 0 0 chr5 137341521 137341587 -65743945 + (TTTTA)n Simple_repeat Simple_repeat 1 66 0 25458 27 1 0 chr5 137341587 137345394 -65740138 - L1PA2 LINE L1 -24 6131 2322 14288 43 70 4 chr5 137345389 137347246 -65738286 + L1PA2 LINE L1 363 2341 -3805 * 10887 153 44 20 chr5 137347247 137347802 -65737730 - HUERS-P3 LTR ERV1 -5269 2149 1609 234 0 0 0 chr5 137347802 137347828 -65737704 + (CAA)n Simple_repeat Simple_repeat 2 27 0 10887 153 44 20 chr5 137347828 137349547 -65735985 - HUERS-P3 LTR ERV1 -5809 1609 4 3728 131 73 5 chr5 137349550 137350123 -65735409 - LTR9 LTR ERV1 0 612 1 1668 169 17 3 chr5 137350127 137350423 -65735109 - MER49 LTR ERV1 -616 307 8 635 258 24 55 chr5 137350429 137350720 -65734812 - L1MEc LINE L1 -6122 301 20 378 325 73 20 chr5 137350839 137351085 -65734447 + L1ME4a LINE L1 5603 5861 -260 347 376 20 0 chr5 137351088 137351237 -65734295 - L2 LINE L2 -1 3312 3161 707 343 80 45 chr5 137351353 137352087 -65733445 - L2 LINE L2 -337 2977 2218 24 67 0 0 chr5 137352598 137352643 -65732889 + AT_rich Low_complexity Low_complexity 1 45 0 4345 145 23 0 chr5 137352814 137353478 -65732054 + L1P LINE L1 3 681 -5465 2359 89 6 0 chr5 137353468 137353794 -65731738 + L1P LINE L1 1453 1780 -4366 * 1941 56 0 9 chr5 137353804 137354036 -65731496 - AluY SINE Alu -81 230 1 889 221 113 66 chr5 137354068 137354524 -65731008 - MLT1E2 LTR MaLR -65 559 37 2327 109 0 10 chr5 137355988 137356301 -65729231 + AluSx SINE Alu 1 310 -2 1789 245 132 34 chr5 137356961 137357349 -65728183 + L2 LINE L2 2028 2377 -937 4975 112 22 23 chr5 137357349 137358129 -65727403 + MER4E LTR ERV1 1 779 0 1789 245 132 34 chr5 137358129 137358385 -65727147 + L2 LINE L2 2377 2735 -579 614 319 113 34 chr5 137358377 137358445 -65727087 + L2 LINE L2 2867 2928 -385 * 1990 167 25 8 chr5 137358445 137358804 -65726728 - MLT1A1 LTR MaLR 0 365 1 614 319 113 34 chr5 137358804 137359149 -65726383 + L2 LINE L2 2928 3313 0 384 206 54 22 chr5 137359414 137359506 -65726026 + MER58 DNA MER1_type 1 95 -120 242 255 0 0 chr5 137359522 137359569 -65725963 + polypurine Low_complexity Low_complexity 3 49 0 4775 108 22 101 chr5 137359656 137361173 -65724359 - pTR5 LTR ERV1 0 2606 1524 214 147 0 0 chr5 137361208 137361242 -65724290 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 98 24 0 chr5 137362040 137362081 -65723451 + (CATA)n Simple_repeat Simple_repeat 3 44 0 22 35 0 0 chr5 137362978 137363007 -65722525 + AT_rich Low_complexity Low_complexity 1 29 0 364 305 93 98 chr5 137363086 137364109 -65721423 + L2 LINE L2 2254 3272 0 30 27 0 0 chr5 137364114 137364151 -65721381 + AT_rich Low_complexity Low_complexity 1 37 0 196 223 64 64 chr5 137364170 137364264 -65721268 + MER5B DNA MER1_type 85 178 0 642 329 120 3 chr5 137364413 137364729 -65720803 - L3 LINE CR1 -129 1448 1096 193 359 19 10 chr5 137364778 137364881 -65720651 - L3 LINE CR1 -584 993 890 2071 125 0 71 chr5 137364916 137365252 -65720280 - AluSx SINE Alu 0 312 1 203 351 60 30 chr5 137365257 137365425 -65720107 - L3 LINE CR1 -876 701 529 289 364 14 29 chr5 137366109 137366249 -65719283 + MIR3 SINE MIR 2 139 -69 24 0 0 0 chr5 137366964 137366988 -65718544 + AT_rich Low_complexity Low_complexity 1 24 0 423 319 77 56 chr5 137367380 137367741 -65717791 + HAL1b LINE L1 -1 303 -1028 248 328 28 14 chr5 137368120 137368138 -65717394 + L1MC/D LINE L1 2174 2190 -3956 2345 89 7 0 chr5 137368138 137368431 -65717101 + AluY SINE Alu 1 295 -16 248 328 28 14 chr5 137368431 137368699 -65716833 + L1MC/D LINE L1 2190 2464 -3682 501 212 37 111 chr5 137368796 137368985 -65716547 - MER5B DNA MER1_type 0 178 4 258 283 64 32 chr5 137369350 137369537 -65715995 + L1MC/D LINE L1 4735 4927 -1219 451 245 116 29 chr5 137369586 137369989 -65715543 + L1MC/D LINE L1 5008 5444 -743 954 261 59 37 chr5 137370023 137370479 -65715053 + L1MC4 LINE L1 6782 7247 -795 1366 186 4 22 chr5 137370488 137370763 -65714769 - MLT1D LTR MaLR -1 504 235 362 186 0 29 chr5 137370811 137370881 -65714651 - MLT1D LTR MaLR -436 69 2 1187 270 57 29 chr5 137370912 137371524 -65714008 + L1MC4 LINE L1 7272 7900 -142 225 0 0 0 chr5 137373652 137373677 -65711855 + (TG)n Simple_repeat Simple_repeat 2 26 0 5156 168 23 17 chr5 137374688 137375344 -65710188 - L1MC1 LINE L1 -4 6329 5663 435 38 0 0 chr5 137375344 137375397 -65710135 + (TG)n Simple_repeat Simple_repeat 2 54 0 5156 168 23 17 chr5 137375397 137375778 -65709754 - L1MC1 LINE L1 -670 5663 5286 827 168 6 0 chr5 137375792 137375959 -65709573 + CT-rich Low_complexity Low_complexity 2 169 0 1023 146 0 0 chr5 137375984 137376128 -65709404 - AluJb SINE Alu -82 230 87 387 188 40 0 chr5 137376130 137376231 -65709301 - L1MC1 LINE L1 -853 5293 5189 190 259 103 0 chr5 137376480 137376538 -65708994 - MIR SINE MIR -95 167 104 234 0 0 0 chr5 137377090 137377116 -65708416 + (CA)n Simple_repeat Simple_repeat 2 27 0 922 199 125 7 chr5 137377700 137377981 -65707551 - MER5C DNA MER1_type -2 322 9 457 208 42 0 chr5 137378609 137378705 -65706827 - MER81 DNA DNA 0 114 15 2412 167 75 17 chr5 137378827 137379306 -65706226 + MLT2B2 LTR ERVL 1 507 -8 460 261 18 9 chr5 137379323 137379434 -65706098 - L2 LINE L2 -15 3257 3146 264 240 48 32 chr5 137379753 137379878 -65705654 - L1ME4a LINE L1 -66 6055 5929 584 14 14 0 chr5 137380517 137380590 -65704942 + (TTATG)n Simple_repeat Simple_repeat 2 75 0 2095 127 0 0 chr5 137380596 137380880 -65704652 - AluSx SINE Alu -28 284 1 429 297 35 14 chr5 137381102 137381247 -65704285 - MIR SINE MIR -70 192 45 557 256 6 28 chr5 137381248 137381424 -65704108 + MLT1B LTR MaLR 1 172 -202 180 200 0 0 chr5 137381442 137381487 -65704045 + CT-rich Low_complexity Low_complexity 1 45 0 726 266 31 0 chr5 137381498 137381690 -65703842 + MLT1B LTR MaLR 193 390 0 459 255 6 61 chr5 137381695 137381708 -65703824 - MLT1G LTR MaLR 0 590 578 1343 196 151 0 chr5 137381708 137382025 -65703507 - MLT1A1 LTR MaLR 0 365 1 459 255 6 61 chr5 137382025 137382187 -65703345 - MLT1G LTR MaLR -12 578 400 617 283 61 19 chr5 137382259 137382569 -65702963 - MLT1G LTR MaLR -306 284 5 1341 176 12 4 chr5 137383824 137384068 -65701464 - MLT1A1 LTR MaLR 0 365 120 1907 149 147 5 chr5 137384200 137384575 -65700957 - MSTA LTR MaLR 0 428 1 9168 148 7 39 chr5 137384575 137386202 -65699330 - MSTA-int LTR MaLR 0 1580 5 549 65 26 0 chr5 137386206 137386283 -65699249 - MSTA LTR MaLR 0 428 350 3424 36 0 14 chr5 137386283 137386723 -65698809 - L1P2 LINE L1 -347 5807 5374 2384 60 0 0 chr5 137386723 137387022 -65698510 + L1PA5 LINE L1 5852 6150 -4 1468 136 191 13 chr5 137387022 137387331 -65698201 - MSTA LTR MaLR -64 364 1 333 0 0 0 chr5 137387349 137387386 -65698146 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr5 137388479 137388500 -65697032 + AT_rich Low_complexity Low_complexity 1 21 0 361 283 59 87 chr5 137389122 137389341 -65696191 - MIR SINE MIR -5 257 45 188 336 47 17 chr5 137389394 137389544 -65695988 - MIR SINE MIR -4 258 46 1554 223 104 56 chr5 137390302 137390841 -65694691 + MLT1E LTR MaLR 29 593 0 935 267 26 8 chr5 137390841 137391318 -65694214 + MLT1E-int LTR MaLR 1 602 -769 404 282 41 41 chr5 137391534 137391729 -65693803 + MLT1E-int LTR MaLR 692 886 -485 601 259 64 95 chr5 137391841 137392262 -65693270 + MLT1E-int LTR MaLR 964 1371 0 851 277 129 49 chr5 137392262 137392811 -65692721 + MLT1E LTR MaLR 1 593 0 366 270 0 60 chr5 137393254 137393354 -65692178 - MIR SINE MIR -147 115 22 1777 154 49 35 chr5 137393488 137393858 -65691674 - THE1C LTR MaLR 0 375 1 20738 182 35 21 chr5 137393901 137394105 -65691427 - L1PA10 LINE L1 -136 6347 6147 2535 116 8 0 chr5 137394105 137394466 -65691066 + THE1B LTR MaLR 1 364 0 20738 182 35 21 chr5 137394466 137400524 -65685008 - L1PA10 LINE L1 -336 6147 1 337 269 176 0 chr5 137400524 137400643 -65684889 - L1ME4a LINE L1 -258 5863 5724 1317 148 24 142 chr5 137400656 137400988 -65684544 - AluJo SINE Alu -8 294 2 387 237 8 53 chr5 137401061 137401192 -65684340 - L1ME4a LINE L1 -437 5684 5560 27 92 0 0 chr5 137401255 137401331 -65684201 + AT_rich Low_complexity Low_complexity 1 76 0 365 292 50 71 chr5 137401591 137401653 -65683879 - L2 LINE L2 -638 2676 2614 1701 196 36 0 chr5 137401653 137401989 -65683543 - MER7A DNA MER2_type 0 346 1 365 292 50 71 chr5 137401989 137402166 -65683366 - L2 LINE L2 -700 2614 2442 2263 61 30 3 chr5 137402320 137402615 -65682917 + AluY SINE Alu 1 303 -8 312 284 34 54 chr5 137402648 137402796 -65682736 + MIR SINE MIR 118 262 0 190 293 45 45 chr5 137402802 137402935 -65682597 - L2 LINE L2 -1317 1997 1865 1700 222 125 0 chr5 137403056 137403497 -65682035 + MLT1D LTR MaLR 3 498 -7 14662 128 18 19 chr5 137405321 137406690 -65678842 - Tigger1 DNA MER2_type 0 2418 1052 411 21 0 0 chr5 137406690 137406738 -65678794 + (CTA)n Simple_repeat Simple_repeat 2 49 0 14662 128 18 19 chr5 137406738 137407789 -65677743 - Tigger1 DNA MER2_type -1366 1052 1 986 258 62 28 chr5 137408220 137408573 -65676959 + MER74A LTR ERVL 124 488 -70 382 191 43 11 chr5 137408489 137408583 -65676949 - MER88 LTR ERVL -287 177 81 * 702 253 74 41 chr5 137408653 137408922 -65676610 - L2 LINE L2 -35 3278 3001 652 261 87 0 chr5 137410388 137410583 -65674949 + MIR SINE MIR 2 213 -49 246 32 0 0 chr5 137413011 137413042 -65672490 + (A)n Simple_repeat Simple_repeat 1 31 0 187 409 16 0 chr5 137414169 137414296 -65671236 + MIR3 SINE MIR 72 200 -8 186 289 22 0 chr5 137414759 137414804 -65670728 + MIR SINE MIR 56 101 -161 2221 174 31 18 chr5 137415202 137415593 -65669939 - MSTD LTR MaLR 0 396 1 206 242 61 0 chr5 137416023 137416089 -65669443 - MIR3 SINE MIR -16 192 123 382 250 35 17 chr5 137417464 137417580 -65667952 - MER94 DNA DNA -9 125 8 271 177 101 13 chr5 137418575 137418654 -65666878 + L1M4 LINE L1 4615 4700 -1446 1185 228 43 0 chr5 137418861 137419115 -65666417 - L1MEc LINE L1 -6075 321 57 848 277 82 36 chr5 137419131 137419654 -65665878 - L1MEc LINE L1 -4838 1558 1012 1307 133 6 105 chr5 137419978 137420327 -65665205 + AluSg SINE Alu 1 310 0 207 222 37 19 chr5 137421197 137421251 -65664281 + G-rich Low_complexity Low_complexity 5 59 0 23 54 0 0 chr5 137422792 137422829 -65662703 + AT_rich Low_complexity Low_complexity 1 37 0 296 77 19 0 chr5 137433973 137434025 -65651507 + (TG)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr5 137435442 137435464 -65650068 + AT_rich Low_complexity Low_complexity 1 22 0 14382 30 13 0 chr5 137435778 137437518 -65648014 - L1P LINE L1 -1067 5079 3318 4680 132 46 21 chr5 137437622 137438402 -65647130 - HSMAR2 DNA Mariner -404 898 92 1828 102 32 0 chr5 137438402 137438687 -65646845 + AluY SINE Alu 1 294 -17 4680 132 46 21 chr5 137438687 137438777 -65646755 - HSMAR2 DNA Mariner -1210 92 6 261 0 0 0 chr5 137438777 137438806 -65646726 + (TG)n Simple_repeat Simple_repeat 1 29 0 315 129 76 36 chr5 137438925 137439068 -65646464 + Alu SINE Alu 2 116 -184 577 146 12 0 chr5 137440971 137441053 -65644479 + AluJ/FLAM SINE Alu 4 86 -226 25 0 0 0 chr5 137441956 137441981 -65643551 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr5 137442155 137442202 -65643330 + AT_rich Low_complexity Low_complexity 1 47 0 307 178 37 9 chr5 137442311 137442418 -65643114 + GA-rich Low_complexity Low_complexity 1 110 0 1616 170 55 34 chr5 137442491 137442873 -65642659 - MLT1B LTR MaLR 0 390 1 1286 198 79 11 chr5 137443022 137443444 -65642088 - L1MA7 LINE L1 -10 6604 6136 9946 209 61 60 chr5 137451070 137453623 -65631909 - L1MA7 LINE L1 -1071 5390 2842 711 91 79 42 chr5 137453623 137453788 -65631744 - AluYa5 SINE Alu -1 310 140 9946 209 61 60 chr5 137453788 137456716 -65628816 - L1MA7 LINE L1 -3619 2842 1 333 269 176 0 chr5 137456716 137456835 -65628697 - L1ME4a LINE L1 -258 5863 5724 1079 167 45 30 chr5 137456847 137457170 -65628362 - AluJb SINE Alu -18 294 7 291 219 34 67 chr5 137457246 137457365 -65628167 - L1ME4a LINE L1 -437 5684 5570 285 201 91 68 chr5 137457533 137457605 -65627927 + L1M4 LINE L1 5120 5189 -975 1624 115 34 50 chr5 137457605 137457928 -65627604 + L1MA2 LINE L1 5987 6304 0 285 201 91 68 chr5 137457928 137458095 -65627437 + L1M4 LINE L1 5189 5357 -807 510 205 8 26 chr5 137458207 137458324 -65627208 - L1ME4a LINE L1 -674 5488 5374 8117 25 0 4 chr5 137458525 137459996 -65625536 + L1PA4 LINE L1 4690 6155 0 1607 91 9 18 chr5 137460050 137460271 -65625261 - L1PA10 LINE L1 -2 6166 5948 27 62 0 0 chr5 137461848 137461896 -65623636 + AT_rich Low_complexity Low_complexity 1 48 0 245 262 32 71 chr5 137463831 137463957 -65621575 - MIR SINE MIR -14 248 128 343 302 93 8 chr5 137464344 137464473 -65621059 - MIR SINE MIR -117 145 6 2147 98 0 20 chr5 137464730 137465035 -65620497 - AluY SINE Alu -12 299 1 402 318 47 26 chr5 137465834 137466026 -65619506 + L2 LINE L2 2224 2419 -895 203 350 150 17 chr5 137466207 137466327 -65619205 + L2 LINE L2 3137 3272 0 1131 291 120 38 chr5 137466738 137467346 -65618186 + MLT2F LTR ERVL 6 663 0 272 219 107 118 chr5 137468167 137468311 -65617221 - L1ME4a LINE L1 -808 5338 5197 1544 115 39 42 chr5 137468311 137468623 -65616909 - L1MA2 LINE L1 0 6304 5994 272 219 107 118 chr5 137468623 137468748 -65616784 - L1ME4a LINE L1 -949 5197 5072 373 188 24 24 chr5 137468750 137468835 -65616697 + MSTC LTR MaLR 1 85 -343 684 309 89 19 chr5 137468956 137470036 -65615496 - L1MCc LINE L1 -4511 2430 1114 282 204 44 44 chr5 137471892 137472005 -65613527 - Charlie7 DNA MER1_type 0 2612 2500 * 959 267 80 29 chr5 137471993 137472581 -65612951 - Charlie7 DNA MER1_type -1923 689 1 217 293 132 45 chr5 137473134 137473489 -65612043 + L2 LINE L2 1493 1878 -1436 192 77 0 0 chr5 137473828 137473854 -65611678 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 1013 254 105 82 chr5 137475255 137475429 -65610103 - L2 LINE L2 -5 3308 3140 2216 114 0 0 chr5 137475429 137475728 -65609804 + AluSg SINE Alu 1 299 -11 1013 254 105 82 chr5 137475728 137476361 -65609171 - L2 LINE L2 -173 3140 2484 1505 226 16 25 chr5 137476365 137476733 -65608799 + MLT1A2 LTR MaLR 6 370 -4 884 291 32 4 chr5 137476733 137476980 -65608552 - L2 LINE L2 -821 2493 2240 2385 75 0 3 chr5 137478131 137478424 -65607108 + AluSc SINE Alu 1 292 -17 378 42 0 0 chr5 137478974 137479022 -65606510 + (CA)n Simple_repeat Simple_repeat 2 49 0 26 74 0 0 chr5 137479988 137480042 -65605490 + AT_rich Low_complexity Low_complexity 1 54 0 1944 137 26 3 chr5 137480467 137480773 -65604759 - AluSq SINE Alu 0 313 1 23 68 0 0 chr5 137481318 137481362 -65604170 + AT_rich Low_complexity Low_complexity 1 44 0 276 339 17 17 chr5 137482358 137482476 -65603056 + MLT2E LTR ERVL 32 149 -479 26 0 0 0 chr5 137482725 137482751 -65602781 + AT_rich Low_complexity Low_complexity 1 26 0 201 278 0 0 chr5 137486271 137486325 -65599207 + T-rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr5 137486634 137486655 -65598877 + AT_rich Low_complexity Low_complexity 1 21 0 468 0 0 0 chr5 137487761 137487813 -65597719 + (TG)n Simple_repeat Simple_repeat 1 52 0 227 298 65 16 chr5 137488111 137488235 -65597297 - MER94 DNA DNA 0 134 5 205 286 71 14 chr5 137488557 137488627 -65596905 - MIR SINE MIR -3 259 186 248 239 84 0 chr5 137488628 137488699 -65596833 + MLT1L LTR MaLR 3 79 -536 227 234 0 0 chr5 137489168 137489215 -65596317 - L2 LINE L2 -4 3309 3263 2658 93 25 3 chr5 137489286 137489653 -65595879 + THE1C LTR MaLR 1 375 0 4018 132 68 65 chr5 137490949 137491732 -65593800 + LTR1 LTR ERV1 1 785 0 21 0 0 0 chr5 137492014 137492035 -65593497 + AT_rich Low_complexity Low_complexity 1 21 0 2224 229 64 32 chr5 137492385 137492948 -65592584 + MLT1E LTR MaLR 1 581 -12 247 250 62 70 chr5 137492958 137493086 -65592446 - L1ME LINE L1 -318 5803 5677 595 272 181 36 chr5 137493837 137494113 -65591419 - MER102b DNA MER1_type -21 320 5 23 0 0 0 chr5 137497200 137497223 -65588309 + AT_rich Low_complexity Low_complexity 1 23 0 411 231 222 54 chr5 137499015 137499236 -65586296 + MIR SINE MIR 5 262 0 212 297 54 0 chr5 137501129 137501203 -65584329 - MIR SINE MIR -40 222 145 1322 187 38 105 chr5 137501296 137501687 -65583845 + MLT1A1 LTR MaLR 1 365 0 601 267 26 77 chr5 137501826 137502099 -65583433 + MLT1K LTR MaLR 327 585 -3 313 342 51 8 chr5 137502105 137502222 -65583310 - MIR SINE MIR -66 142 21 1877 180 8 46 chr5 137502265 137502380 -65583152 + MLT2C1 LTR ERVL 1 119 -401 1491 205 3 23 chr5 137502380 137502682 -65582850 + AluJb SINE Alu 1 296 -16 189 0 0 0 chr5 137502685 137502706 -65582826 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1877 180 8 46 chr5 137502706 137502968 -65582564 + MLT2C1 LTR ERVL 121 480 -40 334 130 58 29 chr5 137503027 137503096 -65582436 + MLT2C1 LTR ERVL 450 520 0 1183 240 93 0 chr5 137504561 137504874 -65580658 - LTR16C LTR ERVL -2 489 148 634 206 0 15 chr5 137506739 137506875 -65578657 + MER94 DNA DNA 1 134 0 1181 238 103 34 chr5 137507345 137507782 -65577750 - MLT1C LTR MaLR 0 467 1 994 287 104 42 chr5 137508096 137508626 -65576906 - MLT1K LTR MaLR -24 564 2 1528 179 44 91 chr5 137508820 137509229 -65576303 - MLT1B LTR MaLR 0 390 1 1731 178 0 24 chr5 137511469 137511767 -65573765 + AluJo SINE Alu 3 293 -19 295 281 127 13 chr5 137511812 137512235 -65573297 + L1ME LINE L1 5324 5814 -307 29 28 0 0 chr5 137512521 137512557 -65572975 + AT_rich Low_complexity Low_complexity 1 36 0 1797 174 76 21 chr5 137512599 137512641 -65572891 - MLT2C1 LTR ERVL 0 464 426 195 42 0 0 chr5 137512641 137512665 -65572867 + (TG)n Simple_repeat Simple_repeat 2 25 0 1797 174 76 21 chr5 137512665 137513069 -65572463 - MLT2C1 LTR ERVL -38 426 1 8471 160 57 40 chr5 137513069 137513444 -65572088 - ERVL-C1 LTR ERVL -8 5756 5389 1979 153 0 0 chr5 137513444 137513731 -65571801 + AluSx SINE Alu 5 291 -21 8471 160 57 40 chr5 137513731 137516018 -65569514 - ERVL-C1 LTR ERVL -375 5389 2975 309 64 0 64 chr5 137516155 137516202 -65569330 - MLT2C1 LTR ERVL -4 393 350 13551 203 32 3 chr5 137516207 137519156 -65566376 - ERVL-B1 LTR ERVL -1787 3977 854 705 222 48 44 chr5 137519163 137519415 -65566117 - ERVL-B1 LTR ERVL -5510 254 2 290 153 34 0 chr5 137519416 137519475 -65566057 - MLT2B1 LTR ERVL 0 520 460 489 270 0 0 chr5 137519475 137519590 -65565942 - MLT2C1 LTR ERVL -282 115 1 207 263 171 26 chr5 137519894 137519970 -65565562 + MIR SINE MIR 33 119 -143 520 368 79 17 chr5 137521997 137522353 -65563179 + MLT1K LTR MaLR 33 410 -178 260 235 0 0 chr5 137522438 137522489 -65563043 + MLT1L LTR MaLR 564 614 -1 420 324 98 15 chr5 137522982 137523186 -65562346 - MIR SINE MIR -34 228 8 13203 172 40 20 chr5 137524082 137527882 -65557650 - L1MA5A LINE L1 -8 6931 3026 2799 16 0 0 chr5 137527882 137528193 -65557339 - AluYa5 SINE Alu 0 311 1 13203 172 40 20 chr5 137528193 137528341 -65557191 - L1MA5A LINE L1 -3913 3026 2882 3813 191 41 16 chr5 137528346 137529081 -65556451 - L1MA5A LINE L1 -6033 756 4 39 74 0 0 chr5 137531132 137531213 -65554319 + AT_rich Low_complexity Low_complexity 1 81 0 207 315 109 55 chr5 137531319 137531557 -65553975 + L2 LINE L2 2508 2758 -556 317 283 40 57 chr5 137532221 137532398 -65553134 - MIR SINE MIR 0 262 89 783 161 23 0 chr5 137533680 137533810 -65551722 - FLAM_C SINE Alu 0 133 1 747 321 152 43 chr5 137534006 137534995 -65550537 + L2 LINE L2 2220 3308 -5 2582 79 11 14 chr5 137536150 137536504 -65549028 + THE1A LTR MaLR 1 353 -2 6097 211 47 6 chr5 137536797 137538324 -65547208 - L1 LINE L1 -1860 4286 2698 958 202 12 0 chr5 137538324 137538497 -65547035 - L1PA15-16 LINE L1 -5787 1062 888 244 276 13 13 chr5 137538578 137538654 -65546878 + L2 LINE L2 2174 2249 -1065 444 309 126 10 chr5 137539125 137539332 -65546200 + L2 LINE L2 2286 2516 -798 1640 158 0 36 chr5 137543979 137544257 -65541275 - AluJo SINE Alu -15 297 30 315 0 0 0 chr5 137544396 137544431 -65541101 + (CA)n Simple_repeat Simple_repeat 1 35 0 410 198 0 50 chr5 137545611 137545712 -65539820 + L1MC2 LINE L1 6240 6335 -9 236 308 142 25 chr5 137546143 137546263 -65539269 + MIR SINE MIR 24 157 -105 260 262 145 0 chr5 137546409 137546527 -65539005 - MIR SINE MIR -63 145 21 451 343 5 30 chr5 137547050 137547248 -65538284 - MIR SINE MIR -47 215 23 314 320 97 17 chr5 137547455 137547630 -65537902 + MIR SINE MIR 3 191 -71 23 33 0 0 chr5 137548188 137548218 -65537314 + AT_rich Low_complexity Low_complexity 1 30 0 199 164 218 0 chr5 137548676 137548731 -65536801 - MIR3 SINE MIR -7 201 135 205 184 0 0 chr5 137550219 137550257 -65535275 + CT-rich Low_complexity Low_complexity 2 39 0 275 214 52 17 chr5 137550293 137550466 -65535066 + (TA)n Simple_repeat Simple_repeat 2 180 0 1282 223 107 33 chr5 137550494 137550831 -65534701 - MLT1A2 LTR MaLR -11 363 2 192 77 0 0 chr5 137550831 137550857 -65534675 + (TATATG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr5 137552473 137552495 -65533037 + AT_rich Low_complexity Low_complexity 1 22 0 3300 74 9 5 chr5 137552858 137553288 -65532244 + MLT2A1 LTR ERVL 1 432 -12 201 74 0 0 chr5 137554925 137554952 -65530580 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1246 192 145 20 chr5 137555139 137555483 -65530049 - MLT1B LTR MaLR 0 390 4 408 370 85 12 chr5 137555510 137555675 -65529857 - MER91A DNA MER1_type -2 194 18 824 250 25 10 chr5 137556133 137556333 -65529199 + MIR SINE MIR 2 204 -58 961 211 94 57 chr5 137556334 137556652 -65528880 + MER46C DNA MER2_type 8 337 -1 221 333 13 0 chr5 137556779 137556854 -65528678 - MIR3 SINE MIR -1 207 132 2910 227 75 12 chr5 137556872 137557350 -65528182 + L1MEc LINE L1 43 592 -5804 199 0 31 31 chr5 137557350 137557382 -65528150 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2910 227 75 12 chr5 137557382 137557701 -65527831 + L1MEc LINE L1 592 890 -5506 * 6419 225 60 20 chr5 137557700 137561607 -65523925 + L1MD1 LINE L1 50 4506 -2034 388 174 165 91 chr5 137561607 137561728 -65523804 + FLAM_A SINE Alu 1 130 -3 6419 225 60 20 chr5 137561728 137562107 -65523425 + L1MD1 LINE L1 4506 4868 -1672 * 10113 156 42 6 chr5 137562104 137566476 -65519056 - L1PA10 LINE L1 -2185 4677 3 6071 170 29 18 chr5 137566486 137568699 -65516833 + L1PA10 LINE L1 4648 6884 0 4953 115 5 48 chr5 137568695 137569134 -65516398 + L1PB1 LINE L1 5352 5808 -343 * 480 35 0 0 chr5 137569134 137569192 -65516340 + (TA)n Simple_repeat Simple_repeat 1 58 0 243 0 0 0 chr5 137569191 137569218 -65516314 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 4953 115 5 48 chr5 137569192 137569611 -65515921 + L1PB1 LINE L1 5808 6148 -3 4743 190 56 23 chr5 137569687 137571340 -65514192 + L1MD1 LINE L1 4850 6577 -59 1669 274 59 47 chr5 137571469 137572348 -65513184 + L1MEc LINE L1 1027 1916 -4480 528 235 95 80 chr5 137572379 137572626 -65512906 + L1ME1 LINE L1 5823 6078 -88 2315 114 30 30 chr5 137572626 137572987 -65512545 - THE1B LTR MaLR -3 361 1 528 235 95 80 chr5 137572987 137573075 -65512457 + L1ME1 LINE L1 6078 6163 -3 1329 199 32 0 chr5 137573116 137573362 -65512170 + AluJo SINE Alu 34 287 -25 183 250 23 0 chr5 137573897 137573941 -65511591 + MER5C DNA MER1_type 2 46 -278 371 321 115 18 chr5 137574154 137574319 -65511213 + MER5A DNA MER1_type 7 187 -2 729 177 13 21 chr5 137574593 137574760 -65510772 + L1MA4 LINE L1 5874 6038 -259 373 158 37 0 chr5 137574760 137574842 -65510690 + L1MB4 LINE L1 6096 6180 0 21 36 0 0 chr5 137574921 137574949 -65510583 + AT_rich Low_complexity Low_complexity 1 28 0 218 309 127 40 chr5 137576115 137576241 -65509291 + L2 LINE L2 3132 3268 -4 26 30 0 0 chr5 137577242 137577275 -65508257 + AT_rich Low_complexity Low_complexity 1 33 0 636 278 63 32 chr5 137577525 137577777 -65507755 + MIR SINE MIR 2 261 -1 215 254 70 14 chr5 137577768 137577839 -65507693 - L2 LINE L2 -27 3245 3171 * 339 281 201 30 chr5 137578629 137578828 -65506704 - MLT1K LTR MaLR -219 369 137 405 265 6 16 chr5 137578843 137579013 -65506519 + MIR SINE MIR 15 240 -22 347 138 30 2 chr5 137579375 137579607 -65505925 + AluSx SINE Alu 1 280 -20 335 78 20 0 chr5 137579610 137579661 -65505871 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 240 224 0 17 chr5 137579871 137579929 -65505603 + GA-rich Low_complexity Low_complexity 4 60 0 327 206 41 27 chr5 137581116 137581189 -65504343 - L2 LINE L2 -1 3312 3239 205 315 72 9 chr5 137581210 137581321 -65504211 + MER91C DNA MER1_type 1 118 -22 280 313 93 27 chr5 137581451 137581737 -65503795 - L2 LINE L2 -259 3054 2739 704 218 117 34 chr5 137582956 137583162 -65502370 - L1ME2 LINE L1 -9 6155 5933 555 205 63 89 chr5 137583181 137583430 -65502102 + L1ME2 LINE L1 5796 6036 -130 320 191 90 22 chr5 137583430 137583519 -65502013 + L1MA10 LINE L1 6238 6332 -2 281 270 152 46 chr5 137583622 137584011 -65501521 - L1M4 LINE L1 -4927 1615 1186 798 222 62 14 chr5 137584518 137585001 -65500531 - L1ME3 LINE L1 0 6162 5607 434 245 15 60 chr5 137585000 137585050 -65500482 - L1MEc LINE L1 -3819 2396 2345 * 3640 92 30 0 chr5 137585050 137585559 -65499973 - L1PA10 LINE L1 -11 6157 5634 434 245 15 60 chr5 137585559 137585708 -65499824 - L1MEc LINE L1 -3870 2345 2206 1504 164 64 42 chr5 137585744 137586234 -65499298 - LTR49 LTR ERV1 -31 564 15 1810 162 36 0 chr5 137586287 137586589 -65498943 - MER7A DNA MER2_type 0 346 36 635 279 17 21 chr5 137586661 137586894 -65498638 - L1MEc LINE L1 -4322 2074 1843 387 260 131 56 chr5 137587436 137587660 -65497872 + L1MCa LINE L1 811 1237 -5179 1404 245 9 55 chr5 137587660 137588080 -65497452 + L1ME2 LINE L1 5428 5828 -336 1498 226 41 53 chr5 137588087 137588207 -65497325 + MLT1C LTR MaLR 6 126 -341 2315 108 0 0 chr5 137588207 137588503 -65497029 + AluSx SINE Alu 1 296 -16 1498 226 41 53 chr5 137588503 137588850 -65496682 + MLT1C LTR MaLR 126 467 0 756 198 78 56 chr5 137588850 137589082 -65496450 + L1ME2 LINE L1 5826 6062 -102 328 261 11 0 chr5 137589123 137589211 -65496321 + L1ME2 LINE L1 6066 6154 -10 323 301 50 55 chr5 137589255 137589454 -65496078 + L1MC4 LINE L1 7826 8023 -19 574 261 139 27 chr5 137589508 137589920 -65495612 + L1MCa LINE L1 1268 1780 -4827 501 318 32 16 chr5 137589938 137590127 -65495405 - MIR SINE MIR -6 256 65 21 0 0 0 chr5 137590585 137590606 -65494926 + AT_rich Low_complexity Low_complexity 1 21 0 207 295 0 0 chr5 137590929 137590990 -65494542 + (TA)n Simple_repeat Simple_repeat 2 62 0 210 265 18 0 chr5 137591018 137591184 -65494348 + (TA)n Simple_repeat Simple_repeat 1 169 0 1073 127 57 42 chr5 137591572 137591784 -65493748 - THE1C LTR MaLR 0 375 161 1311 200 46 10 chr5 137591784 137592096 -65493436 - THE1-int LTR MaLR -924 710 382 243 255 122 10 chr5 137592104 137592202 -65493330 + L2 LINE L2 3191 3299 -14 23 54 0 0 chr5 137592759 137592796 -65492736 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr5 137592965 137593001 -65492531 + AT_rich Low_complexity Low_complexity 1 36 0 309 254 27 36 chr5 137593021 137593131 -65492401 - L1MC4 LINE L1 -1322 6720 6612 709 99 39 35 chr5 137593150 137593700 -65491832 + (TA)n Simple_repeat Simple_repeat 1 552 0 1074 261 97 33 chr5 137593752 137594174 -65491358 + LTR16A1 LTR ERVL 9 457 0 25 0 0 0 chr5 137594325 137594350 -65491182 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 137594432 137594455 -65491077 + AT_rich Low_complexity Low_complexity 1 23 0 216 319 181 14 chr5 137594747 137594885 -65490647 - MIR SINE MIR -23 239 79 958 155 3 169 chr5 137594920 137595210 -65490322 + LTR49 LTR ERV1 1 242 -353 1355 182 104 20 chr5 137595214 137595626 -65489906 + LTR48 LTR ERV1 345 705 -2 23 0 0 0 chr5 137597397 137597420 -65488112 + AT_rich Low_complexity Low_complexity 1 23 0 3750 123 47 31 chr5 137598824 137599467 -65486065 - MER39B LTR ERV1 0 653 1 318 348 114 0 chr5 137600014 137600172 -65485360 - L3 LINE CR1 -325 1252 1077 1384 197 50 23 chr5 137600720 137601019 -65484513 + AluJb SINE Alu 4 310 -2 205 208 91 117 chr5 137601052 137601129 -65484403 - L2 LINE L2 -62 3210 3136 370 369 125 14 chr5 137601153 137601513 -65484019 - L3 LINE CR1 -600 977 578 263 289 252 6 chr5 137601554 137601711 -65483821 - MIR SINE MIR -56 206 5 506 328 54 60 chr5 137601991 137602305 -65483227 - L3 LINE CR1 -1199 378 67 348 273 152 8 chr5 137602632 137602764 -65482768 + MIR SINE MIR 112 262 0 206 343 90 8 chr5 137602859 137602993 -65482539 + L3 LINE CR1 1350 1494 -83 254 285 174 7 chr5 137603034 137603178 -65482354 + MER117 DNA MER1_type 30 197 0 191 333 161 0 chr5 137603428 137603521 -65482011 - L2 LINE L2 0 3272 3165 1013 167 0 39 chr5 137603524 137603704 -65481828 + MER2 DNA MER2_type 1 173 -172 321 180 0 0 chr5 137603794 137603844 -65481688 + MER2 DNA MER2_type 270 319 -26 2008 152 0 3 chr5 137604512 137604815 -65480717 - AluJo SINE Alu 0 312 11 186 43 0 0 chr5 137604837 137604860 -65480672 + (T)n Simple_repeat Simple_repeat 1 23 0 24 53 0 0 chr5 137605204 137605242 -65480290 + AT_rich Low_complexity Low_complexity 1 38 0 2255 111 0 3 chr5 137605315 137605612 -65479920 - AluSx SINE Alu -16 296 1 1822 147 48 45 chr5 137609439 137609813 -65475719 - THE1C LTR MaLR 0 375 1 255 125 0 0 chr5 137610382 137610422 -65475110 + (TA)n Simple_repeat Simple_repeat 2 41 0 319 275 58 42 chr5 137612270 137612390 -65473142 + MIR SINE MIR 98 219 -43 326 358 74 19 chr5 137615060 137615222 -65470310 - MER5B DNA MER1_type -1 177 7 2487 46 0 13 chr5 137615736 137616041 -65469491 - AluY SINE Alu -10 301 1 1050 181 113 4 chr5 137616243 137616491 -65469041 - ORSL DNA AcHobo 0 275 1 700 222 21 14 chr5 137616503 137616647 -65468885 - MER45A DNA AcHobo 0 178 34 216 184 0 0 chr5 137618049 137618098 -65467434 + (TG)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr5 137618689 137618719 -65466813 + AT_rich Low_complexity Low_complexity 1 30 0 860 115 0 0 chr5 137618719 137618849 -65466683 - L1MA1 LINE L1 0 6302 6173 1766 131 81 34 chr5 137619341 137619699 -65465833 + THE1C LTR MaLR 1 375 0 9648 122 49 10 chr5 137619699 137620056 -65465476 + THE1C-int LTR MaLR 1 343 -1237 2079 128 20 10 chr5 137620056 137620353 -65465179 - AluSx SINE Alu -8 304 5 9648 122 49 10 chr5 137620353 137621514 -65464018 + THE1C-int LTR MaLR 343 1578 -2 2027 125 55 33 chr5 137621516 137621883 -65463649 + THE1C LTR MaLR 1 375 0 209 267 0 0 chr5 137622794 137622839 -65462693 - MIR SINE MIR -74 134 90 509 261 39 72 chr5 137622860 137623067 -65462465 + MIR SINE MIR 32 231 -31 523 215 89 118 chr5 137623768 137624014 -65461518 + MER102b DNA MER1_type 103 341 0 265 305 81 38 chr5 137624428 137624638 -65460894 - L2 LINE L2 -18 3295 3077 364 233 145 35 chr5 137625242 137625414 -65460118 + MLT1D LTR MaLR 1 191 -314 590 301 56 9 chr5 137626095 137626323 -65459209 + MIR SINE MIR 15 251 -11 1492 181 24 0 chr5 137626346 137626634 -65458898 - LTR32 LTR ERVL -162 309 15 1721 154 25 28 chr5 137628630 137628660 -65456872 - L1MC1 LINE L1 -4 6329 6300 2045 129 3 29 chr5 137628660 137628971 -65456561 + AluSg SINE Alu 1 303 -7 1721 154 25 28 chr5 137628971 137629265 -65456267 - L1MC1 LINE L1 -33 6300 6006 41744 45 2 0 chr5 137630275 137636418 -65449114 + L1PA4 LINE L1 2 6155 0 380 248 118 81 chr5 137636712 137636958 -65448574 + L1MC4 LINE L1 7757 8011 -31 29 28 0 0 chr5 137637138 137637174 -65448358 + AT_rich Low_complexity Low_complexity 1 36 0 317 278 9 0 chr5 137638410 137638525 -65447007 - L1MC1 LINE L1 -304 5817 5702 440 319 129 36 chr5 137638600 137639255 -65446277 - L1MC1 LINE L1 -521 5600 4885 2023 62 31 0 chr5 137639282 137639538 -65445994 - AluY SINE Alu -2 309 46 244 211 0 0 chr5 137639543 137639595 -65445937 - L1MC1 LINE L1 -1300 4846 4795 2212 110 0 3 chr5 137640102 137640402 -65445130 - AluSg SINE Alu -11 299 1 2302 109 3 0 chr5 137640799 137641102 -65444430 + AluSp SINE Alu 5 308 -5 2517 80 3 0 chr5 137641587 137641899 -65443633 - AluSp SINE Alu 0 313 1 205 299 69 0 chr5 137642754 137642841 -65442691 - MIR SINE MIR -2 260 168 2409 46 0 3 chr5 137643715 137644022 -65441510 + AluY SINE Alu 1 306 0 2791 163 11 22 chr5 137644316 137644862 -65440670 - L1MB3 LINE L1 -150 6033 5494 829 269 44 14 chr5 137644862 137645233 -65440299 - L1ME2 LINE L1 -289 5875 5484 755 206 27 5 chr5 137645718 137645902 -65439630 + MER96B DNA MER1_type? 1 188 -229 722 190 21 0 chr5 137646304 137646446 -65439086 - MLT1B LTR MaLR 0 390 246 2541 152 21 33 chr5 137646565 137647047 -65438485 + MER41E LTR ERV1 1 476 -36 1429 206 132 72 chr5 137647047 137647815 -65437717 + LTR1B LTR ERV1 1 1003 -17 858 203 19 34 chr5 137647917 137648124 -65437408 - MLT1B LTR MaLR -178 212 9 272 169 0 17 chr5 137649629 137649688 -65435844 + GA-rich Low_complexity Low_complexity 3 60 0 227 100 0 25 chr5 137650007 137650047 -65435485 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 2094 136 13 7 chr5 137650195 137650485 -65435047 + AluSx SINE Alu 1 295 -17 993 113 0 32 chr5 137650485 137650670 -65434862 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2094 136 13 7 chr5 137650670 137650688 -65434844 + AluSx SINE Alu 295 311 -1 335 23 23 0 chr5 137650715 137650759 -65434773 + (GAAAA)n Simple_repeat Simple_repeat 1 45 0 186 227 0 0 chr5 137652609 137652653 -65432879 + GA-rich Low_complexity Low_complexity 1 44 0 886 241 13 30 chr5 137654708 137654944 -65430588 + MIR SINE MIR 10 241 -21 815 227 44 18 chr5 137655094 137655319 -65430213 - MLT1A1 LTR MaLR 0 365 135 1037 169 12 0 chr5 137655324 137655496 -65430036 + AluSg/x SINE Alu 138 311 -1 532 144 0 0 chr5 137655505 137655595 -65429937 - MLT1A1 LTR MaLR -282 92 3 225 0 0 0 chr5 137656232 137656257 -65429275 + (A)n Simple_repeat Simple_repeat 1 25 0 695 205 92 20 chr5 137656327 137656522 -65429010 + MIR SINE MIR 34 242 -20 1224 245 95 27 chr5 137656621 137657111 -65428421 + MLT1F1 LTR MaLR 3 588 -7 314 286 20 10 chr5 137657342 137657440 -65428092 - MER81 DNA DNA 0 114 16 2270 121 3 0 chr5 137657513 137657811 -65427721 + AluSx SINE Alu 1 299 -13 529 274 89 6 chr5 137658738 137658917 -65426615 - MIR SINE MIR 0 262 69 291 252 22 37 chr5 137659137 137659291 -65426241 + GA-rich Low_complexity Low_complexity 1 151 0 1914 144 3 52 chr5 137659550 137659876 -65425656 + AluSx SINE Alu 3 312 0 2266 173 2 15 chr5 137660066 137660465 -65425067 - MSTD LTR MaLR 0 396 3 691 159 15 8 chr5 137660467 137660599 -65424933 - MSTD-int LTR MaLR 0 1735 1603 247 158 0 0 chr5 137660608 137660646 -65424886 + Alu SINE Alu 1 38 -265 4908 123 4 14 chr5 137660651 137661433 -65424099 + THE1C-int LTR MaLR 793 1566 -14 2170 117 13 35 chr5 137661457 137661834 -65423698 + THE1C LTR MaLR 7 375 0 1180 216 0 0 chr5 137661834 137662061 -65423471 + L1PB3 LINE L1 155 381 -5823 421 121 66 11 chr5 137662090 137662181 -65423351 + L1PB3 LINE L1 628 723 -5481 12591 200 20 17 chr5 137662184 137666864 -65418668 + L1PB3 LINE L1 1505 6211 0 38 22 0 0 chr5 137666864 137666909 -65418623 + AT_rich Low_complexity Low_complexity 1 45 0 3711 149 39 11 chr5 137666909 137667552 -65417980 - Tigger3b DNA MER2_type -569 662 2 1194 152 78 0 chr5 137667552 137667756 -65417776 - MSTD-int LTR MaLR -1287 448 229 386 315 14 28 chr5 137667787 137667930 -65417602 + MER5B DNA MER1_type 16 156 -22 1149 196 4 0 chr5 137667973 137668203 -65417329 + L1M4 LINE L1 4614 4844 -1302 1559 203 116 9 chr5 137668207 137668552 -65416980 + MSTD LTR MaLR 1 382 -14 1123 260 37 6 chr5 137668554 137668908 -65416624 + L1M4 LINE L1 4870 5234 -912 22 0 0 0 chr5 137669941 137669963 -65415569 + AT_rich Low_complexity Low_complexity 1 22 0 1714 226 42 9 chr5 137671526 137671955 -65413577 - Charlie4a DNA MER1_type -44 464 22 1348 165 23 11 chr5 137672078 137672344 -65413188 - L1 LINE L1 -810 5336 5068 2662 164 18 15 chr5 137672344 137672800 -65412732 - L1PB1 LINE L1 -1 6866 6410 515 196 0 0 chr5 137672800 137672897 -65412635 - L1PB1 LINE L1 -3141 3721 3625 * 9039 172 153 10 chr5 137672896 137674909 -65410623 - L1PB1 LINE L1 -4282 2581 282 213 39 0 0 chr5 137675243 137675269 -65410263 + (ATG)n Simple_repeat Simple_repeat 2 27 0 211 380 0 0 chr5 137676011 137676082 -65409450 + L3 LINE CR1 1496 1566 -11 2561 125 120 157 chr5 137676291 137676918 -65408614 - MER39 LTR ERV1 0 707 107 1988 145 10 7 chr5 137676918 137677215 -65408317 + AluSx SINE Alu 1 298 -14 2561 125 120 157 chr5 137677215 137677293 -65408239 - MER39 LTR ERV1 -600 107 28 281 302 30 55 chr5 137677574 137677776 -65407756 - HAL1b LINE L1 -7 1341 1145 510 236 31 0 chr5 137677907 137678034 -65407498 + L1M4 LINE L1 3909 4039 -2107 1751 100 48 0 chr5 137678036 137678286 -65407246 - L1PA11 LINE L1 0 6174 5913 256 256 64 13 chr5 137679407 137679485 -65406047 - L2 LINE L2 -36 3236 3155 1470 229 44 30 chr5 137680417 137680823 -65404709 - Tigger3b DNA MER2_type -818 413 2 1194 152 78 0 chr5 137680823 137681027 -65404505 - MLT-int LTR MaLR -1287 448 229 386 315 14 28 chr5 137681058 137681201 -65404331 + MER5B DNA MER1_type 16 156 -22 1149 196 4 0 chr5 137681244 137681474 -65404058 + L1M4 LINE L1 4614 4844 -1302 1559 203 116 9 chr5 137681478 137681823 -65403709 + MSTD LTR MaLR 1 382 -14 1123 260 37 6 chr5 137681825 137682179 -65403353 + L1M4 LINE L1 4870 5234 -912 22 0 0 0 chr5 137683212 137683234 -65402298 + AT_rich Low_complexity Low_complexity 1 22 0 1714 226 42 9 chr5 137684826 137685255 -65400277 - Charlie4a DNA MER1_type -44 464 22 1348 165 23 11 chr5 137685379 137685645 -65399887 - L1 LINE L1 -810 5336 5068 2662 164 18 15 chr5 137685645 137686101 -65399431 - L1PB1 LINE L1 -1 6866 6410 515 196 0 0 chr5 137686101 137686198 -65399334 - L1PB1 LINE L1 -3141 3721 3625 * 9420 186 141 9 chr5 137686197 137688385 -65397147 - L1PB1 LINE L1 -4282 2581 105 211 380 0 0 chr5 137689112 137689183 -65396349 + L3 LINE CR1 1496 1566 -11 2943 125 114 151 chr5 137689392 137690019 -65395513 - MER39 LTR ERV1 0 707 109 1988 145 10 7 chr5 137690019 137690316 -65395216 + AluSx SINE Alu 1 298 -14 2943 125 114 151 chr5 137690316 137690422 -65395110 - MER39 LTR ERV1 -598 109 1 281 302 30 55 chr5 137690615 137690817 -65394715 - HAL1b LINE L1 -7 1341 1145 510 236 31 0 chr5 137690948 137691075 -65394457 + L1M4 LINE L1 3909 4039 -2107 1751 100 48 0 chr5 137691077 137691327 -65394205 - L1PA11 LINE L1 0 6174 5913 256 256 64 13 chr5 137692448 137692526 -65393006 - L2 LINE L2 -36 3236 3155 338 137 0 14 chr5 137695338 137695411 -65390121 + (TA)n Simple_repeat Simple_repeat 2 73 0 3292 151 75 9 chr5 137695627 137696185 -65389347 + LTR49 LTR ERV1 1 595 0 1384 182 151 48 chr5 137696295 137696647 -65388885 - MLT1B LTR MaLR -2 388 1 1913 262 36 18 chr5 137696945 137697498 -65388034 + MER74B LTR ERVL 59 621 -1 288 0 0 0 chr5 137698681 137698713 -65386819 + (TG)n Simple_repeat Simple_repeat 2 33 0 6742 86 15 0 chr5 137699053 137700001 -65385531 - L1PA10 LINE L1 -12 6156 5199 928 74 0 33 chr5 137700082 137700203 -65385329 - L1PA8 LINE L1 -7 6165 6049 247 319 132 28 chr5 137701036 137701249 -65384283 - MLT1K LTR MaLR -65 523 289 248 224 0 60 chr5 137701279 137701346 -65384186 - MLT1L LTR MaLR -414 201 139 487 224 0 19 chr5 137701493 137701649 -65383883 + GA-rich Low_complexity Low_complexity 4 156 0 376 286 123 18 chr5 137702088 137702259 -65383273 + MIR SINE MIR 53 241 -21 213 231 39 0 chr5 137702544 137702596 -65382936 + GA-rich Low_complexity Low_complexity 4 57 0 1245 228 6 67 chr5 137703022 137703338 -65382194 - AluJb SINE Alu -4 298 2 294 199 130 53 chr5 137703828 137703959 -65381573 - MER103 DNA DNA -9 157 17 204 264 0 0 chr5 137704226 137704279 -65381253 + L2 LINE L2 3256 3308 -5 758 316 37 8 chr5 137704770 137705014 -65380518 + MIR SINE MIR 2 252 -10 360 0 0 0 chr5 137705190 137705230 -65380302 + (TG)n Simple_repeat Simple_repeat 2 41 0 1653 167 94 72 chr5 137705343 137705798 -65379734 - MLT1C LTR MaLR 0 467 3 1572 178 3 57 chr5 137705840 137706155 -65379377 + AluJo SINE Alu 1 298 -14 246 105 0 0 chr5 137706155 137706193 -65379339 + (GA)n Simple_repeat Simple_repeat 1 38 0 184 312 64 99 chr5 137706527 137706626 -65378906 + L2 LINE L2 3132 3226 -46 1515 178 22 102 chr5 137706626 137706985 -65378547 - MLT1A2 LTR MaLR -2 372 47 1520 171 91 4 chr5 137706985 137707248 -65378284 - AluJo SINE Alu -26 286 1 1515 178 22 102 chr5 137707248 137707292 -65378240 - MLT1A2 LTR MaLR -327 47 1 184 312 64 99 chr5 137707292 137707333 -65378199 + L2 LINE L2 3226 3267 -5 669 147 191 0 chr5 137707369 137707526 -65378006 - MER53 DNA DNA -2 187 1 541 92 35 11 chr5 137707591 137707678 -65377854 - MER53 DNA DNA -83 106 18 * 544 25 0 50 chr5 137707602 137707682 -65377850 + MER53 DNA DNA 105 180 -9 616 189 0 33 chr5 137711109 137711231 -65374301 + L1MC1 LINE L1 6198 6315 -18 305 62 21 0 chr5 137711266 137711314 -65374218 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 225 328 49 49 chr5 137711343 137711465 -65374067 + MER102b DNA MER1_type 210 331 -10 1636 135 115 3 chr5 137711510 137711822 -65373710 - L1MA7 LINE L1 -51 6240 5894 22 0 0 0 chr5 137712132 137712154 -65373378 + AT_rich Low_complexity Low_complexity 1 22 0 205 234 85 0 chr5 137713131 137713178 -65372354 + MIR3 SINE MIR 119 169 -39 243 292 144 70 chr5 137713473 137713716 -65371816 - L2 LINE L2 -346 2968 2708 188 250 143 0 chr5 137714052 137714108 -65371424 + L2 LINE L2 3246 3309 -4 233 279 89 44 chr5 137714388 137714546 -65370986 - MIR SINE MIR 0 262 98 1368 290 100 10 chr5 137714730 137715497 -65370035 - L2 LINE L2 0 3313 2480 282 250 100 92 chr5 137715703 137715823 -65369709 + MIR3 SINE MIR 74 194 -14 361 233 0 58 chr5 137716337 137716440 -65369092 - LTR49 LTR ERV1 -11 584 488 1322 157 11 75 chr5 137716440 137716720 -65368812 + AluJo SINE Alu 40 301 -11 612 124 21 62 chr5 137716721 137716818 -65368714 + AluJo/FRAM SINE Alu 190 282 -30 429 20 0 0 chr5 137716818 137716868 -65368664 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 3006 143 120 12 chr5 137716869 137717473 -65368059 - LTR48 LTR ERV1 -116 671 6 2333 154 46 0 chr5 137717473 137717843 -65367689 + MER39B LTR ERV1 1 387 -266 25 0 0 0 chr5 137717843 137717868 -65367664 + AT_rich Low_complexity Low_complexity 1 25 0 804 165 8 24 chr5 137717868 137717995 -65367537 - FLAM_C SINE Alu -14 129 5 1391 152 106 8 chr5 137717996 137718260 -65367272 + MER39 LTR ERV1 413 702 -5 1985 112 30 17 chr5 137718570 137718866 -65366666 - AluSp SINE Alu -13 300 1 1730 168 3 37 chr5 137721258 137721580 -65363952 - AluJb SINE Alu -1 311 1 264 274 95 26 chr5 137721797 137721932 -65363600 - MER5B DNA MER1_type -28 161 7 336 303 6 79 chr5 137722298 137722463 -65363069 + MIR SINE MIR 110 262 0 2126 133 3 7 chr5 137723679 137723987 -65361545 - AluJb SINE Alu -5 307 1 1714 171 24 17 chr5 137724014 137724307 -65361225 + AluSc SINE Alu 1 295 -14 1998 122 55 81 chr5 137724519 137724904 -65360628 + THE1C LTR MaLR 1 375 0 308 271 0 21 chr5 137725278 137725374 -65360158 - MIR3 SINE MIR -9 199 106 184 341 77 0 chr5 137725514 137725605 -65359927 + MIR SINE MIR 111 208 -54 1588 93 17 137 chr5 137725638 137726020 -65359512 + AluSq SINE Alu 1 341 0 409 209 216 8 chr5 137726572 137726706 -65358826 - MER5A DNA MER1_type -1 188 27 210 213 62 0 chr5 137726862 137726942 -65358590 + (TA)n Simple_repeat Simple_repeat 1 85 0 324 262 0 65 chr5 137727209 137727316 -65358216 + MIR SINE MIR 163 262 0 1437 179 103 74 chr5 137727497 137727682 -65357850 - LTR54B LTR ERV1 0 498 320 1552 163 38 42 chr5 137727682 137727995 -65357537 + AluJb SINE Alu 1 312 0 1437 179 103 74 chr5 137727995 137728284 -65357248 - LTR54B LTR ERV1 -178 320 10 349 324 156 30 chr5 137728474 137728878 -65356654 - L2 LINE L2 -11 3261 2807 2540 124 86 2 chr5 137729074 137729469 -65356063 - MSTA LTR MaLR 0 428 1 2021 137 7 104 chr5 137729604 137730027 -65355505 - MLT1B LTR MaLR -8 382 1 222 208 0 0 chr5 137730511 137730564 -65354968 + (CA)n Simple_repeat Simple_repeat 1 53 0 2102 133 0 7 chr5 137730879 137731187 -65354345 + AluSg SINE Alu 1 306 -4 274 349 40 23 chr5 137731925 137732100 -65353432 + MIR3 SINE MIR 29 206 -2 381 257 147 0 chr5 137733004 137733113 -65352419 + MER5B DNA MER1_type 1 125 -53 618 183 89 66 chr5 137733118 137733331 -65352201 + MER34C LTR ERV1 361 578 -7 2137 247 104 33 chr5 137733336 137734226 -65351306 + L1MC4 LINE L1 6640 7593 -449 3210 86 11 33 chr5 137734231 137734687 -65350845 + LTR7 LTR ERV1 3 448 -2 18606 106 61 50 chr5 137734705 137737903 -65347629 + HERVH LTR ERV1 60 3290 -4423 3494 103 0 8 chr5 137737893 137738399 -65347133 + HERVH LTR ERV1 3492 3993 -3720 * 4210 152 17 1 chr5 137738401 137739053 -65346479 + HERVH LTR ERV1 4488 5149 -2564 2295 116 52 49 chr5 137739033 137739633 -65345899 + HERVH LTR ERV1 5588 7713 0 * 2921 80 94 14 chr5 137739633 137740048 -65345484 + LTR7 LTR ERV1 1 448 -2 288 248 182 25 chr5 137740053 137740174 -65345358 + L1MC4 LINE L1 7597 7736 -306 276 218 0 0 chr5 137740173 137740228 -65345304 + L1MC4 LINE L1 7963 8017 -25 * 197 215 0 25 chr5 137743249 137743328 -65342204 + (CATA)n Simple_repeat Simple_repeat 4 80 0 338 0 0 23 chr5 137743437 137743480 -65342052 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2413 75 13 0 chr5 137743483 137743789 -65341743 - AluY SINE Alu -1 310 1 189 350 68 58 chr5 137744261 137744364 -65341168 + MIR SINE MIR 36 139 -69 3325 155 52 2 chr5 137744406 137744930 -65340602 + MER44D DNA MER2_type 1 605 0 2334 129 117 30 chr5 137744981 137745220 -65340312 - MSTA LTR MaLR 0 428 140 1997 162 0 0 chr5 137745220 137745522 -65340010 + AluSx SINE Alu 2 303 -9 2334 129 117 30 chr5 137745522 137745676 -65339856 - MSTA LTR MaLR -288 140 1 912 166 6 12 chr5 137745705 137745868 -65339664 + FAM SINE Alu 1 49 0 2063 123 0 26 chr5 137747001 137747310 -65338222 + AluJb SINE Alu 1 301 -11 571 287 112 19 chr5 137747311 137747729 -65337803 + L1ME4a LINE L1 5663 6119 -2 2716 156 85 39 chr5 137749041 137749095 -65336437 - MLT2B1 LTR ERVL -4 516 466 207 0 0 0 chr5 137749095 137749118 -65336414 + (CA)n Simple_repeat Simple_repeat 2 24 0 2716 156 85 39 chr5 137749118 137749556 -65335976 - MLT2B1 LTR ERVL -54 466 1 2529 111 18 52 chr5 137750305 137750693 -65334839 + THE1C LTR MaLR 1 375 0 655 254 77 36 chr5 137750924 137751172 -65334360 + MIR SINE MIR 5 262 0 264 255 41 51 chr5 137752971 137753069 -65332463 + LTR48B LTR ERV1 1 97 -547 2191 49 4 0 chr5 137753148 137753460 -65332072 + L1PA4 LINE L1 5864 6176 0 1360 206 32 56 chr5 137753460 137753834 -65331698 + MER39 LTR ERV1 341 705 -2 2180 100 0 52 chr5 137753870 137754179 -65331353 + AluSp SINE Alu 1 293 -20 608 312 51 28 chr5 137754530 137754783 -65330749 + MIR SINE MIR 4 262 0 207 0 0 0 chr5 137754917 137754940 -65330592 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 1876 217 43 30 chr5 137755175 137755636 -65329896 - MLT1C LTR MaLR 0 467 1 245 301 102 16 chr5 137755665 137755792 -65329740 - MIR SINE MIR -75 133 17 183 80 0 0 chr5 137756025 137756050 -65329482 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 2013 217 60 0 chr5 137756244 137756695 -65328837 + L1MC4 LINE L1 7425 7902 -140 866 297 12 8 chr5 137757222 137757468 -65328064 + MIR SINE MIR 2 248 -14 184 357 36 0 chr5 137757527 137757583 -65327949 - L2 LINE L2 -30 3242 3185 522 325 85 5 chr5 137757844 137758044 -65327488 - MIR SINE MIR -6 256 41 239 303 146 0 chr5 137758109 137758198 -65327334 - L2 LINE L2 -4 3309 3208 672 265 76 55 chr5 137759399 137759637 -65325895 - MIR SINE MIR -11 251 9 751 228 95 47 chr5 137759864 137760385 -65325147 + LTR48B LTR ERV1 3 641 -3 680 340 63 22 chr5 137760617 137760932 -65324600 - MLT1K LTR MaLR -136 452 125 984 190 0 0 chr5 137761019 137761209 -65324323 + FRAM SINE Alu 1 176 0 15442 134 28 20 chr5 137761278 137763677 -65321855 - Tigger1 DNA MER2_type -1 2417 2 537 206 19 0 chr5 137764538 137764645 -65320887 + L1MC1 LINE L1 6219 6327 -6 2255 98 10 0 chr5 137764896 137765201 -65320331 + AluSq SINE Alu 1 308 -5 419 123 0 14 chr5 137765208 137765281 -65320251 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 198 257 40 68 chr5 137766051 137766125 -65319407 - L3 LINE CR1 -10 1567 1496 271 296 65 0 chr5 137766364 137766472 -65319060 + MIR SINE MIR 134 248 -14 207 162 0 0 chr5 137767235 137767272 -65318260 + (TA)n Simple_repeat Simple_repeat 2 38 0 1920 171 0 3 chr5 137767279 137767589 -65317943 - AluSx SINE Alu -3 309 1 264 331 137 92 chr5 137767736 137768050 -65317482 - L2 LINE L2 0 3272 2945 1590 255 56 5 chr5 137768188 137768565 -65316967 - MSTD LTR MaLR 0 396 1 1616 173 127 6 chr5 137768570 137768894 -65316638 - MSTD-int LTR MaLR -6 1729 1367 1148 204 34 63 chr5 137768930 137769287 -65316245 - MSTD LTR MaLR 0 396 1 1670 352 132 20 chr5 137769290 137770879 -65314653 - L2 LINE L2 -433 2881 1115 257 342 111 8 chr5 137771010 137771127 -65314405 + MIR SINE MIR 16 144 -64 3078 166 59 5 chr5 137774848 137775438 -65310094 - LTR29 LTR ERV1 0 622 1 311 241 0 0 chr5 137775522 137775605 -65309927 + MLT1K LTR MaLR 486 568 -20 525 313 69 13 chr5 137776110 137776487 -65309045 + L1MCc LINE L1 17 414 -6009 1491 110 0 0 chr5 137776499 137776721 -65308811 + AluSg/x SINE Alu 94 315 0 30 27 0 0 chr5 137776877 137776914 -65308618 + AT_rich Low_complexity Low_complexity 1 37 0 923 275 64 29 chr5 137776938 137776967 -65308565 + L1MCc LINE L1 2534 2561 -4561 1747 169 4 0 chr5 137776967 137777233 -65308299 - AluJb SINE Alu -45 267 1 923 275 64 29 chr5 137777233 137777781 -65307751 + L1MCc LINE L1 2561 3131 -3991 376 268 34 106 chr5 137777888 137778067 -65307465 + MLT1H1 LTR MaLR 82 283 -312 646 128 0 9 chr5 137779771 137779880 -65305652 + L1MB7 LINE L1 4924 5031 -1115 * 1374 174 3 67 chr5 137779878 137780194 -65305338 + L1MB7 LINE L1 5868 6163 -21 1042 266 137 27 chr5 137780398 137780837 -65304695 - MLT1H LTR MaLR -50 499 13 2507 101 24 32 chr5 137781081 137781407 -65304125 + THE1C LTR MaLR 1 325 -50 2141 138 0 3 chr5 137781407 137781712 -65303820 + AluSq SINE Alu 1 304 -9 2507 101 24 32 chr5 137781712 137781763 -65303769 + THE1C LTR MaLR 325 375 0 326 255 0 29 chr5 137781962 137782064 -65303468 + HAL1 LINE L1 2123 2221 -286 21 0 0 0 chr5 137782785 137782806 -65302726 + AT_rich Low_complexity Low_complexity 1 21 0 557 305 62 24 chr5 137783779 137784003 -65301529 + MIR SINE MIR 3 236 -26 198 333 8 60 chr5 137784052 137784169 -65301363 - L2 LINE L2 -181 3091 2981 2162 88 3 11 chr5 137785162 137785481 -65300051 - AluY SINE Alu 0 317 1 410 301 32 0 chr5 137786469 137786625 -65298907 + Charlie8 DNA MER1_type 102 262 -2155 229 375 166 13 chr5 137786764 137787475 -65298057 - L2 LINE L2 -447 2867 2048 1136 283 142 11 chr5 137787478 137787937 -65297595 + LTR33 LTR ERVL 3 521 0 3414 52 9 7 chr5 137788298 137788758 -65296774 + L1PA8A LINE L1 5320 5780 -351 39105 67 1 3 chr5 137788762 137794916 -65290616 + L1PA5 LINE L1 3 6149 -5 2469 91 5 60 chr5 137794931 137795315 -65290217 + L1PA8A LINE L1 5769 6131 0 289 361 72 12 chr5 137796600 137796766 -65288766 + MIR SINE MIR 13 188 -74 2296 112 7 7 chr5 137797109 137797413 -65288119 - AluSx SINE Alu -8 304 1 3702 168 33 9 chr5 137797559 137798317 -65287215 - L1MB8 LINE L1 0 6178 5403 2352 91 0 3 chr5 137799057 137799355 -65286177 - AluSg SINE Alu -13 297 1 25 0 0 0 chr5 137799364 137799389 -65286143 + AT_rich Low_complexity Low_complexity 1 25 0 1916 127 54 43 chr5 137799496 137799867 -65285665 - THE1C LTR MaLR 0 375 1 517 216 113 46 chr5 137800175 137800369 -65285163 - MLT1H LTR MaLR -256 293 87 229 279 189 8 chr5 137800448 137800570 -65284962 - MIR SINE MIR -81 181 38 484 299 15 0 chr5 137801125 137801262 -65284270 + MIR3 SINE MIR 64 202 -6 21 0 0 0 chr5 137803425 137803446 -65282086 + AT_rich Low_complexity Low_complexity 1 21 0 1926 174 31 6 chr5 137803454 137803810 -65281722 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr5 137805484 137805512 -65280020 + AT_rich Low_complexity Low_complexity 1 28 0 763 191 8 0 chr5 137806182 137806313 -65279219 - FLAM_A SINE Alu 0 133 2 192 40 0 0 chr5 137807183 137807208 -65278324 + (T)n Simple_repeat Simple_repeat 1 25 0 305 253 0 20 chr5 137807228 137807327 -65278205 + MARNA DNA Mariner 261 357 -229 402 21 0 0 chr5 137807488 137807535 -65277997 + (CA)n Simple_repeat Simple_repeat 2 48 0 1260 221 48 29 chr5 137808790 137809062 -65276470 - AluJo SINE Alu -35 277 1 184 292 21 0 chr5 137809617 137809665 -65275867 + L2 LINE L2 3022 3070 -202 298 314 89 8 chr5 137809793 137809917 -65275615 + L2 LINE L2 3180 3313 0 33 85 0 0 chr5 137810172 137810254 -65275278 + AT_rich Low_complexity Low_complexity 1 82 0 223 285 269 0 chr5 137810769 137810899 -65274633 + L2 LINE L2 3107 3271 -1 22 0 0 0 chr5 137811008 137811030 -65274502 + AT_rich Low_complexity Low_complexity 1 22 0 418 256 109 52 chr5 137811456 137811686 -65273846 + L1ME LINE L1 5342 5584 -537 201 74 0 0 chr5 137811691 137811718 -65273814 + (CA)n Simple_repeat Simple_repeat 1 27 0 6491 156 27 10 chr5 137811844 137812635 -65272897 + L1MB3 LINE L1 20 839 -5545 227 31 31 0 chr5 137812635 137812667 -65272865 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6491 156 27 10 chr5 137812667 137813067 -65272465 + L1MB3 LINE L1 839 1231 -5153 4356 54 32 26 chr5 137813067 137814084 -65271448 + MER11A LTR ERVK 1 1266 0 6547 213 46 21 chr5 137814084 137814453 -65271079 + L1MB3 LINE L1 1226 1584 -4798 180 0 0 0 chr5 137814453 137814473 -65271059 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6547 213 46 21 chr5 137814473 137817559 -65267973 + L1MB3 LINE L1 1584 4772 -1610 361 259 15 15 chr5 137817564 137817695 -65267837 + L1MB3 LINE L1 5230 5360 -1022 4265 145 21 7 chr5 137817730 137819199 -65266333 - L1PB1 LINE L1 0 6151 4639 3471 192 35 22 chr5 137819210 137819702 -65265830 + L1MB3 LINE L1 5377 5861 -558 14854 124 22 19 chr5 137819702 137822113 -65263419 - Tigger1 DNA MER2_type 0 2418 1 3471 192 35 22 chr5 137822113 137822311 -65263221 + L1MB3 LINE L1 5861 6055 -364 2193 118 0 19 chr5 137822311 137822626 -65262906 + AluSx SINE Alu 1 309 -3 3471 192 35 22 chr5 137822626 137822975 -65262557 + L1MB3 LINE L1 6055 6418 -1 686 252 211 9 chr5 137823207 137823425 -65262107 + MIR SINE MIR 1 262 0 255 246 0 0 chr5 137823949 137824010 -65261522 + (TA)n Simple_repeat Simple_repeat 1 61 0 187 237 0 0 chr5 137829455 137829493 -65256039 + L2 LINE L2 403 440 -2874 758 311 18 51 chr5 137829885 137830216 -65255316 - MLT1G1 LTR MaLR -273 322 3 707 197 0 29 chr5 137830711 137830848 -65254684 - FLAM_C SINE Alu 0 133 1 424 257 204 13 chr5 137831458 137831610 -65253922 - MER5A DNA MER1_type -6 183 3 21 57 0 0 chr5 137833220 137833255 -65252277 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 137833271 137833295 -65252237 + AT_rich Low_complexity Low_complexity 1 24 0 438 20 0 0 chr5 137833672 137833723 -65251809 + (CA)n Simple_repeat Simple_repeat 2 52 0 332 255 166 57 chr5 137833771 137833928 -65251604 + L2 LINE L2 3118 3291 -22 187 259 0 52 chr5 137833932 137833990 -65251542 + L2 LINE L2 2613 2667 -647 1867 194 21 0 chr5 137834840 137835180 -65250352 + MER7A DNA MER2_type 2 346 0 29 0 0 0 chr5 137837689 137837718 -65247814 + AT_rich Low_complexity Low_complexity 1 29 0 1961 156 5 31 chr5 137838036 137838421 -65247111 + L1MB3 LINE L1 5801 6175 -8 28 29 0 0 chr5 137838422 137838457 -65247075 + AT_rich Low_complexity Low_complexity 1 35 0 1905 212 22 98 chr5 137840035 137840615 -65244917 + MLT1F LTR MaLR 2 537 -5 450 0 0 0 chr5 137840719 137840769 -65244763 + (TG)n Simple_repeat Simple_repeat 2 51 0 301 215 118 32 chr5 137842473 137842566 -65242966 - MIR SINE MIR 0 262 162 921 148 87 20 chr5 137842568 137842717 -65242815 - FRAM SINE Alu -22 154 1 413 127 0 0 chr5 137842852 137842915 -65242617 - MLT1E2 LTR MaLR 0 626 564 458 231 164 34 chr5 137842932 137843140 -65242392 - MLT1D LTR MaLR -270 235 1 1975 48 104 0 chr5 137843279 137843547 -65241985 - THE1A LTR MaLR 0 355 60 202 365 41 20 chr5 137843968 137844212 -65241320 - L2 LINE L2 -339 2975 2727 261 283 252 13 chr5 137844215 137844374 -65241158 + MIR SINE MIR 56 252 -10 693 248 107 17 chr5 137845303 137845537 -65239995 - MER77 LTR ERV1 -11 594 340 1778 139 35 35 chr5 137846188 137846526 -65239006 - MER44D DNA MER2_type -1 608 1 389 182 26 0 chr5 137846586 137846663 -65238869 + MER94 DNA DNA 34 112 -22 553 281 76 5 chr5 137847414 137847599 -65237933 - MIR SINE MIR -48 214 17 230 289 40 26 chr5 137847598 137847674 -65237858 + MIR3 SINE MIR 119 195 -13 * 1106 203 40 84 chr5 137848258 137848686 -65236846 - MER39 LTR ERV1 -42 665 257 246 201 21 22 chr5 137848657 137848755 -65236777 - MER39 LTR ERV1 -544 100 5 * 330 386 18 35 chr5 137848903 137849131 -65236401 - L2 LINE L2 -143 3129 2906 248 321 37 18 chr5 137849205 137849314 -65236218 - L2 LINE L2 -529 2785 2675 835 183 42 33 chr5 137850428 137850668 -65234864 + L1 LINE L1 4142 4383 -1763 1255 278 59 64 chr5 137850677 137851689 -65233843 + L1M3e LINE L1 24 1037 -6452 538 254 110 25 chr5 137851857 137852093 -65233439 + L1M3e LINE L1 2275 2530 -4959 1830 149 147 14 chr5 137852093 137852461 -65233071 - MSTA LTR MaLR 0 428 12 3046 262 37 11 chr5 137852467 137853649 -65231883 + L1MA6 LINE L1 2210 3422 -4143 37390 76 9 10 chr5 137853661 137859807 -65225725 + L1PA6 LINE L1 11 6143 -11 13846 177 29 25 chr5 137859811 137860854 -65224678 + L1MA6 LINE L1 3412 4449 -3270 1700 183 6 25 chr5 137860854 137861171 -65224361 + AluJb SINE Alu 1 311 -1 13846 177 29 25 chr5 137861171 137863898 -65221634 + L1MA6 LINE L1 4449 7205 -514 204 103 37 73 chr5 137863973 137864109 -65221423 + (TA)n Simple_repeat Simple_repeat 2 132 0 253 111 0 19 chr5 137864109 137864163 -65221369 + LTR66 LTR ERVL 386 438 -172 2619 148 35 6 chr5 137864166 137864658 -65220874 + L1MA6 LINE L1 7211 7716 -3 4796 166 33 41 chr5 137864675 137866110 -65219422 + L1MA9 LINE L1 4360 5806 -506 1786 133 25 83 chr5 137866110 137866508 -65219024 + THE1C LTR MaLR 1 375 0 4796 166 33 41 chr5 137866508 137866552 -65218980 + L1MA9 LINE L1 5806 5849 -463 1557 198 0 59 chr5 137866552 137866876 -65218656 + AluJo SINE Alu 1 305 -7 4796 166 33 41 chr5 137866876 137867091 -65218441 + L1MA9 LINE L1 5849 6064 -248 1883 165 7 10 chr5 137867091 137867394 -65218138 - AluJo SINE Alu -10 302 1 4796 166 33 41 chr5 137867394 137867646 -65217886 + L1MA9 LINE L1 6064 6303 -9 506 219 152 0 chr5 137870480 137870585 -65214947 - FLAM_A SINE Alu -12 121 1 1966 183 32 96 chr5 137870882 137871380 -65214152 - MER31B LTR ERV1 0 466 1 403 314 79 7 chr5 137871419 137871559 -65213973 - MIR SINE MIR -96 166 17 245 196 107 0 chr5 137871640 137871696 -65213836 - MIR SINE MIR 0 262 201 655 191 76 0 chr5 137871784 137871915 -65213617 - MER5A DNA MER1_type -47 142 2 226 330 37 18 chr5 137872013 137872122 -65213410 - MIR SINE MIR -132 130 20 1242 182 108 37 chr5 137872337 137872718 -65212814 + LTR48 LTR ERV1 1 402 -193 2250 131 42 28 chr5 137872718 137873077 -65212455 - THE1B LTR MaLR 0 364 1 1242 182 108 37 chr5 137873077 137873284 -65212248 + LTR48 LTR ERV1 402 593 -2 984 160 0 24 chr5 137873470 137873639 -65211893 - AluJo SINE Alu -10 302 138 300 331 34 11 chr5 137874086 137874249 -65211283 + MIR SINE MIR 20 183 -65 376 304 17 9 chr5 137875333 137875448 -65210084 - L2 LINE L2 -11 3302 3187 246 105 0 0 chr5 137876185 137876223 -65209309 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 35 0 0 chr5 137876571 137876600 -65208932 + AT_rich Low_complexity Low_complexity 1 29 0 856 205 27 5 chr5 137878692 137878877 -65206655 - MER5A DNA MER1_type 0 189 1 410 285 155 26 chr5 137878934 137879127 -65206405 - L2 LINE L2 -660 2654 2437 1997 102 0 0 chr5 137979584 137979849 -65105683 - AluY SINE Alu -46 265 1 302 211 71 5 chr5 137979849 137979916 -65105616 - L1ME3A LINE L1 -50 6120 6059 1804 122 0 19 chr5 137979916 137980179 -65105353 + AluSx SINE Alu 44 301 -11 302 211 71 5 chr5 137980179 137980245 -65105287 - L1ME3A LINE L1 -111 6059 5725 547 285 67 26 chr5 137980245 137980512 -65105020 - L1MB2 LINE L1 -237 5934 5657 568 181 147 0 chr5 137981001 137981117 -65104415 - AluJo SINE Alu -178 134 2 356 308 44 53 chr5 137981285 137981512 -65104020 + L2 LINE L2 2312 2536 -778 22 0 0 0 chr5 137982199 137982221 -65103311 + AT_rich Low_complexity Low_complexity 1 22 0 228 362 21 35 chr5 137982425 137982566 -65102966 - MIR SINE MIR -77 185 47 484 227 101 0 chr5 137982693 137982812 -65102720 + L2 LINE L2 3168 3298 -15 4333 140 246 85 chr5 137983079 137984413 -65101119 + pTR5 LTR ERV1 276 2295 -143 748 236 24 0 chr5 137984999 137985164 -65100368 - MER5A DNA MER1_type -14 175 7 591 189 33 72 chr5 137985933 137986086 -65099446 + MER69 DNA AcHobo 1 147 -1079 392 198 28 47 chr5 137986053 137986159 -65099373 + MER69 DNA AcHobo 2422 2525 -1 * 324 221 16 82 chr5 137988035 137988157 -65097375 + L1ME4a LINE L1 5935 6048 -73 244 65 0 0 chr5 137988424 137988455 -65097077 + Alu SINE Alu 34 64 -239 24 53 0 0 chr5 137988689 137988727 -65096805 + AT_rich Low_complexity Low_complexity 1 38 0 2497 93 26 59 chr5 137988727 137988917 -65096615 - L1PB1 LINE L1 -2 6149 5977 2052 132 24 7 chr5 137988917 137989213 -65096319 - AluSx SINE Alu -11 301 1 2497 93 26 59 chr5 137989213 137989409 -65096123 - L1PB1 LINE L1 -174 5977 5776 194 87 87 22 chr5 137989412 137989504 -65096028 + (TA)n Simple_repeat Simple_repeat 2 99 0 892 106 0 8 chr5 137989668 137989800 -65095732 - AluSg1 SINE Alu -178 131 1 258 32 0 0 chr5 137990063 137990094 -65095438 + (TG)n Simple_repeat Simple_repeat 2 32 0 701 173 39 13 chr5 137990637 137990793 -65094739 + MIR SINE MIR 103 262 0 194 330 30 40 chr5 137991262 137991362 -65094170 - MIR3 SINE MIR -108 100 2 387 288 43 118 chr5 137992388 137992738 -65092794 + ERVL LTR ERVL 3151 3350 -1646 1584 322 84 23 chr5 137992759 137992934 -65092598 + ERVL LTR ERVL 3855 4018 -1467 1511 188 10 36 chr5 137992934 137993069 -65092463 + AluJo SINE Alu 1 138 -174 2203 81 0 65 chr5 137993069 137993391 -65092141 + AluSq SINE Alu 1 301 -12 1511 188 10 36 chr5 137993391 137993564 -65091968 + AluJo SINE Alu 138 301 -11 1584 322 84 23 chr5 137993564 137994452 -65091080 + ERVL LTR ERVL 4018 4983 -502 340 191 85 0 chr5 137994565 137994637 -65090895 + AluJ/FLAM SINE Alu 23 92 -210 254 274 47 9 chr5 137994654 137994760 -65090772 + ERVL LTR ERVL 5214 5323 -441 547 308 150 18 chr5 137994938 137995331 -65090201 + LTR16A LTR ERVL 1 445 -5 281 304 0 0 chr5 137995532 137995601 -65089931 + MLT1E LTR MaLR 19 87 -506 447 361 40 13 chr5 137995656 137995883 -65089649 - MLT1J LTR MaLR -170 341 109 27 49 0 0 chr5 137996123 137996164 -65089368 + AT_rich Low_complexity Low_complexity 1 41 0 726 250 74 43 chr5 137996871 137997360 -65088172 + MER34 LTR ERV1 1 539 -3 1873 139 23 13 chr5 137997411 137997712 -65087820 + AluSx SINE Alu 1 304 -8 1816 159 57 27 chr5 137997860 137998193 -65087339 - MER61A LTR ERV1 0 343 1 2261 120 20 6 chr5 137998193 137998965 -65086567 - MER61A-int LTR ERV1 0 5217 4345 2731 85 130 8 chr5 137998965 137999364 -65086168 + LTR7 LTR ERV1 1 448 -2 1749 107 0 0 chr5 137999367 137999620 -65085912 + HERVH LTR ERV1 1 253 -7460 816 164 7 7 chr5 137999735 137999875 -65085657 + HERVH LTR ERV1 255 394 -7319 578 82 68 0 chr5 137999985 138000131 -65085401 + (TA)n Simple_repeat Simple_repeat 2 157 0 52 30 0 0 chr5 138000135 138000201 -65085331 + AT_rich Low_complexity Low_complexity 1 66 0 225 176 40 0 chr5 138000201 138000275 -65085257 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 3082 111 117 35 chr5 138000498 138000984 -65084548 - MER1A DNA MER1_type 0 527 2 2246 100 0 7 chr5 138001157 138001456 -65084076 - AluSc SINE Alu -12 297 1 697 59 0 0 chr5 138002351 138002436 -65083096 + AluSq SINE Alu 2 86 -226 1038 40 8 0 chr5 138002436 138002561 -65082971 + AluSp/q SINE Alu 185 310 -3 220 318 186 27 chr5 138003499 138003719 -65081813 - L2 LINE L2 -24 3289 3035 562 216 176 20 chr5 138004033 138004181 -65081351 - MIR SINE MIR -54 208 38 1815 192 80 22 chr5 138004210 138004574 -65080958 + MLT1B LTR MaLR 3 387 -3 3687 128 217 23 chr5 138004918 138005606 -65079926 - LTR12 LTR ERV1 -1 825 5 494 189 77 107 chr5 138005633 138005999 -65079533 - pTR5 LTR ERV1 -1105 1333 979 280 195 0 0 chr5 138006140 138006181 -65079351 - Alu SINE Alu -258 41 1 582 116 168 0 chr5 138006183 138006278 -65079254 - Tigger5 DNA MER2_type -71 2252 2142 357 305 106 13 chr5 138006375 138006479 -65079053 - L1MC4a LINE L1 -310 5811 5799 16714 91 13 2 chr5 138006479 138009488 -65076044 - L1PA7 LINE L1 0 6154 3121 357 305 106 13 chr5 138009488 138009653 -65075879 - L1MC4a LINE L1 -322 5799 5651 4185 119 96 54 chr5 138010312 138011066 -65074466 + LTR1 LTR ERV1 1 785 0 555 291 114 14 chr5 138011114 138011501 -65074031 + MLT1J LTR MaLR 26 479 -32 540 0 0 0 chr5 138011973 138012033 -65073499 + (TG)n Simple_repeat Simple_repeat 2 61 0 260 277 54 45 chr5 138012224 138012336 -65073196 - MLT1J LTR MaLR -338 173 61 1376 269 68 74 chr5 138012793 138013340 -65072192 - MER101B LTR ERV1 -27 519 1 * 2594 198 154 64 chr5 138013340 138014086 -65071446 - MER21B LTR ERV1 -45 818 5 230 122 0 41 chr5 138014124 138014173 -65071359 + (GGGAA)n Simple_repeat Simple_repeat 3 49 0 2440 58 0 10 chr5 138015810 138016104 -65069428 + AluY SINE Alu 1 291 -20 191 30 0 61 chr5 138016299 138016332 -65069200 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1661 136 29 4 chr5 138016336 138016609 -65068923 - AluJb SINE Alu -32 280 1 2117 110 0 20 chr5 138018980 138019280 -65066252 + AluSx SINE Alu 9 302 -10 332 269 120 0 chr5 138019368 138019476 -65066056 + MIR SINE MIR 66 186 -76 219 111 0 56 chr5 138019852 138019888 -65065644 + L2 LINE L2 3200 3233 -39 224 350 38 38 chr5 138020360 138020517 -65065015 + MIR SINE MIR 51 207 -55 970 127 115 6 chr5 138022885 138023050 -65062482 + L1MB1 LINE L1 5986 6168 0 1175 249 35 59 chr5 138023080 138023505 -65062027 + MLT1C LTR MaLR 53 467 0 942 280 146 31 chr5 138023738 138023885 -65061647 + L2 LINE L2 2460 2589 -724 2960 161 61 23 chr5 138023885 138024488 -65061044 - L1MB8 LINE L1 0 6178 5553 942 280 146 31 chr5 138024488 138024883 -65060649 + L2 LINE L2 2589 2937 -376 1815 149 116 9 chr5 138024883 138025211 -65060321 + MLT1A1 LTR MaLR 1 363 -2 942 280 146 31 chr5 138025211 138025427 -65060105 + L2 LINE L2 2937 3313 0 203 284 42 11 chr5 138025437 138025532 -65060000 - L2 LINE L2 -1446 1868 1771 395 167 26 0 chr5 138025565 138025643 -65059889 + L2 LINE L2 1487 1566 -1748 297 242 72 93 chr5 138025651 138025845 -65059687 - LTR48B LTR ERV1 -11 633 444 371 263 21 0 chr5 138026285 138026380 -65059152 + L2 LINE L2 1580 1676 -1638 2285 96 0 0 chr5 138026409 138026700 -65058832 - AluSg SINE Alu -19 291 1 1837 182 43 6 chr5 138027141 138027470 -65058062 - MER7A DNA MER2_type -5 341 3 210 71 0 0 chr5 138027471 138027499 -65058033 + (TA)n Simple_repeat Simple_repeat 2 29 0 1546 183 14 7 chr5 138027595 138027880 -65057652 + AluJb SINE Alu 2 288 -24 945 118 26 0 chr5 138027893 138028046 -65057486 - Tigger1 DNA MER2_type -62 2356 2200 938 135 0 14 chr5 138028042 138028183 -65057349 - Tigger1 DNA MER2_type -2279 139 1 * 2380 92 0 0 chr5 138028875 138029178 -65056354 - AluY SINE Alu -8 303 1 1555 262 33 120 chr5 138029308 138029806 -65055726 + MER21B LTR ERV1 24 435 -428 2087 128 10 0 chr5 138029806 138030103 -65055429 - AluSx SINE Alu -11 301 2 1555 262 33 120 chr5 138030103 138030361 -65055171 + MER21B LTR ERV1 435 714 -149 702 311 110 24 chr5 138030530 138030951 -65054581 - L1ME4a LINE L1 -44 6077 5693 2177 123 0 3 chr5 138030951 138031261 -65054271 + AluSx SINE Alu 2 310 -2 702 311 110 24 chr5 138031261 138031402 -65054130 - L1ME4a LINE L1 -428 5693 5565 2405 77 3 0 chr5 138031402 138031700 -65053832 + AluY SINE Alu 1 299 -12 702 311 110 24 chr5 138031700 138031802 -65053730 - L1ME4a LINE L1 -556 5565 5355 442 340 78 0 chr5 138032064 138032296 -65053236 + LTR16A LTR ERVL 1 250 -200 2829 302 21 40 chr5 138032317 138032670 -65052862 + HERV16 LTR ERVL 1682 2040 -2956 1609 185 44 13 chr5 138032670 138032968 -65052564 + AluJb SINE Alu 1 307 -5 2829 302 21 40 chr5 138032968 138033246 -65052286 + HERV16 LTR ERVL 2040 2322 -2674 2086 117 44 0 chr5 138033246 138033544 -65051988 - AluSq SINE Alu -2 311 1 2829 302 21 40 chr5 138033544 138033787 -65051745 + HERV16 LTR ERVL 2322 2534 -2462 1909 142 34 7 chr5 138033787 138033962 -65051570 - AluSx SINE Alu -8 304 116 216 0 0 0 chr5 138033962 138033986 -65051546 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1909 142 34 7 chr5 138033986 138034106 -65051426 - AluSx SINE Alu -196 116 1 2829 302 21 40 chr5 138034106 138034316 -65051216 + HERV16 LTR ERVL 2534 2747 -2249 488 329 29 0 chr5 138034344 138034514 -65051018 + HERV16 LTR ERVL 3058 3232 -2532 2377 150 37 21 chr5 138035478 138035912 -65049620 + L1MB4 LINE L1 5646 6086 -94 883 235 37 60 chr5 138035912 138036420 -65049112 - MER39 LTR ERV1 0 644 8 568 154 0 0 chr5 138036428 138036519 -65049013 + L1MB4 LINE L1 6084 6174 -6 999 259 160 32 chr5 138036759 138037233 -65048299 - MER34 LTR ERV1 0 542 8 207 250 0 0 chr5 138037372 138037424 -65048108 + GA-rich Low_complexity Low_complexity 3 54 0 2633 203 140 16 chr5 138037618 138038353 -65047179 - LTR1B LTR ERV1 0 826 1 1855 156 79 73 chr5 138038445 138038506 -65047026 - MER39 LTR ERV1 -4 703 644 2387 134 31 21 chr5 138038506 138038887 -65046645 + L1PA16 LINE L1 5770 6154 -12 1855 156 79 73 chr5 138038887 138038924 -65046608 - MER39 LTR ERV1 -63 644 609 2284 72 3 3 chr5 138038924 138039215 -65046317 + AluY SINE Alu 1 291 -20 1855 156 79 73 chr5 138039215 138039754 -65045778 - MER39 LTR ERV1 -98 609 1 1701 169 10 26 chr5 138040088 138040395 -65045137 - AluJo SINE Alu -10 302 1 1950 144 13 7 chr5 138043057 138043363 -65042169 - AluJb SINE Alu 0 312 5 1961 160 0 13 chr5 138043725 138044038 -65041494 - AluJo SINE Alu 0 312 4 1932 157 58 123 chr5 138044129 138044627 -65040905 + MER31B LTR ERV1 1 466 0 1391 212 61 17 chr5 138044630 138044975 -65040557 - MER93b LTR ERV1 -2 371 12 1519 168 0 19 chr5 138044982 138045244 -65040288 + AluJb SINE Alu 3 259 -53 11194 173 22 18 chr5 138045451 138046552 -65038980 - L1P5 LINE L1 -351 5800 4704 183 42 0 0 chr5 138046552 138046576 -65038956 + (TTG)n Simple_repeat Simple_repeat 2 25 0 267 54 0 0 chr5 138046579 138046616 -65038916 + (TG)n Simple_repeat Simple_repeat 2 38 0 2074 128 0 3 chr5 138046617 138046905 -65038627 - AluSq SINE Alu -26 287 1 11194 173 22 18 chr5 138046905 138048434 -65037098 - L1P5 LINE L1 -1448 4703 3157 194 0 39 0 chr5 138048434 138048460 -65037072 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11194 173 22 18 chr5 138048460 138048643 -65036889 - L1P5 LINE L1 -2994 3157 2976 353 267 198 9 chr5 138049371 138049487 -65036045 + MER5A DNA MER1_type 41 178 -11 1548 218 3 6 chr5 138049488 138049800 -65035732 + AluJb SINE Alu 2 312 0 1405 228 66 68 chr5 138049847 138050390 -65035142 + MER34 LTR ERV1 1 542 0 468 166 207 76 chr5 138050932 138051077 -65034455 + MER5A DNA MER1_type 20 183 -6 586 175 80 29 chr5 138051088 138051225 -65034307 - MIR SINE MIR -8 254 111 292 277 89 45 chr5 138051236 138051348 -65034184 - L2 LINE L2 -6 3266 3150 1105 264 64 41 chr5 138051433 138051595 -65033937 - MLT1F LTR MaLR -211 331 174 779 169 85 17 chr5 138051595 138051772 -65033760 + MER53 DNA DNA 1 189 0 1105 264 64 41 chr5 138051772 138051923 -65033609 - MLT1F LTR MaLR -368 174 11 2341 96 0 6 chr5 138052226 138052538 -65032994 - AluY SINE Alu -1 310 1 1864 82 47 12 chr5 138053181 138053436 -65032096 + AluSc SINE Alu 44 307 -2 190 175 25 25 chr5 138053514 138053554 -65031978 - MIR SINE MIR -12 250 211 237 311 117 20 chr5 138053556 138053757 -65031775 - MIR SINE MIR -24 238 19 1197 218 93 48 chr5 138054122 138054498 -65031034 + MER63B DNA MER1_type 7 399 -37 1479 68 5 16 chr5 138055687 138055877 -65029655 + AluSq SINE Alu 12 199 -114 429 235 0 10 chr5 138055912 138056010 -65029522 - L1ME1 LINE L1 -5 6161 6065 2188 119 0 3 chr5 138056079 138056374 -65029158 + AluSg SINE Alu 1 294 -16 2885 132 7 0 chr5 138057031 138057448 -65028084 + MSTC LTR MaLR 1 420 -8 464 228 4 0 chr5 138058461 138058574 -65026958 - L1MC4 LINE L1 0 8040 7879 3920 143 49 19 chr5 138059861 138060554 -65024978 - L1MA7 LINE L1 -6 6285 5572 381 200 130 0 chr5 138061729 138061829 -65023703 + MLT1D LTR MaLR 6 118 -349 2423 87 0 3 chr5 138061831 138062140 -65023392 + AluY SINE Alu 1 308 -3 826 68 0 0 chr5 138062140 138062243 -65023289 + AluY SINE Alu 199 301 -10 505 201 181 27 chr5 138062345 138062494 -65023038 + MLT1D LTR MaLR 266 437 -68 243 250 0 0 chr5 138062496 138062548 -65022984 + MIR SINE MIR 156 207 -55 2955 91 3 3 chr5 138062550 138062914 -65022618 - THE1B LTR MaLR 0 364 1 429 259 104 62 chr5 138062934 138063127 -65022405 + MIR SINE MIR 51 251 -11 489 296 63 16 chr5 138064102 138064291 -65021241 + MIR SINE MIR 13 210 -52 392 310 58 11 chr5 138064868 138065042 -65020490 - MLT1L LTR MaLR -17 598 417 293 282 145 30 chr5 138065738 138065869 -65019663 - MER5B DNA MER1_type 0 178 33 770 155 0 78 chr5 138066136 138066278 -65019254 - FLAM_C SINE Alu -2 131 1 14814 106 12 28 chr5 138067389 138069794 -65015738 + HERVH LTR ERV1 382 2995 -4718 889 149 50 0 chr5 138069773 138069934 -65015598 + HERVH LTR ERV1 3140 3308 -4405 * 1565 142 0 19 chr5 138069912 138070173 -65015359 + HERVH LTR ERV1 3492 3747 -3966 7136 112 2 7 chr5 138070178 138071205 -65014327 + HERVH LTR ERV1 3993 5014 -2699 2481 112 46 30 chr5 138071191 138071629 -65013903 + HERVH LTR ERV1 7269 7713 0 * 2048 102 6 23 chr5 138071629 138072033 -65013499 + LTR7 LTR ERV1 1 448 -2 15491 100 32 24 chr5 138072035 138074838 -65010694 - MER61A-int LTR ERV1 -868 6072 1649 1998 198 41 52 chr5 138074914 138075547 -65009985 - MER61A-int LTR ERV1 -4510 707 1 1839 139 65 48 chr5 138075547 138075884 -65009648 - MER61A LTR ERV1 0 343 1 1850 183 18 3 chr5 138076492 138076825 -65008707 + MER44D DNA MER2_type 2 609 0 1578 208 88 20 chr5 138076825 138077165 -65008367 - MLT1A1 LTR MaLR 0 365 1 2056 109 32 0 chr5 138077468 138077752 -65007780 + AluSx SINE Alu 1 293 -19 2335 180 26 12 chr5 138077909 138078332 -65007200 + MER66B LTR ERV1 27 455 -31 2363 73 0 0 chr5 138078505 138078794 -65006738 + AluY SINE Alu 6 294 -17 1222 197 161 62 chr5 138078888 138079171 -65006361 - MLT1B LTR MaLR 0 390 64 2004 130 0 3 chr5 138079171 138079464 -65006068 + AluSg SINE Alu 1 292 -18 1222 197 161 62 chr5 138079464 138079535 -65005997 - MLT1B LTR MaLR -326 64 1 825 144 0 0 chr5 138080010 138080128 -65005404 + AluJb SINE Alu 194 311 -1 2425 68 0 3 chr5 138080303 138080598 -65004934 + AluY SINE Alu 1 294 -17 236 170 75 19 chr5 138080740 138080793 -65004739 - LTR67 LTR ERVL -17 540 485 1806 116 0 8 chr5 138081529 138081779 -65003753 + AluSq SINE Alu 56 303 -10 286 349 28 9 chr5 138082219 138082325 -65003207 + MIR SINE MIR 20 127 -81 1413 201 85 89 chr5 138082362 138083092 -65002440 - L1MC5 LINE L1 -54 7907 7181 276 225 250 20 chr5 138083089 138083238 -65002294 - L1MC5 LINE L1 -924 6884 6709 * 1697 216 120 110 chr5 138083255 138084023 -65001509 - L1MC5 LINE L1 -32 7929 7170 1348 179 15 86 chr5 138084023 138084347 -65001185 + AluJb SINE Alu 1 301 -11 1697 216 120 110 chr5 138084347 138084503 -65001029 - L1MC5 LINE L1 -791 7170 7017 709 204 0 23 chr5 138084503 138084635 -65000897 - FLAM_C SINE Alu -4 129 1 1697 216 120 110 chr5 138084635 138084885 -65000647 - L1MC5 LINE L1 -944 7017 6742 2367 100 0 0 chr5 138085089 138085389 -65000143 - AluSx SINE Alu -12 300 1 526 258 95 80 chr5 138085615 138085941 -64999591 - MLT1I LTR MaLR 0 409 79 23 0 0 0 chr5 138086208 138086231 -64999301 + AT_rich Low_complexity Low_complexity 1 23 0 1670 156 10 26 chr5 138086364 138086671 -64998861 + AluJb SINE Alu 1 302 -10 1998 148 9 102 chr5 138086671 138087091 -64998441 + MER57A LTR ERV1 12 392 -11 742 266 79 77 chr5 138087200 138087306 -64998226 - MLT1C LTR MaLR 0 467 363 879 160 0 0 chr5 138087306 138087437 -64998095 + FLAM_C SINE Alu 1 131 -2 742 266 79 77 chr5 138087437 138087773 -64997759 - MLT1C LTR MaLR -104 363 24 271 279 15 15 chr5 138088985 138089053 -64996479 + MIR SINE MIR 9 76 -186 2324 82 0 3 chr5 138091772 138092063 -64993469 + AluY SINE Alu 1 290 -21 204 97 0 0 chr5 138092172 138092203 -64993329 + (TG)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr5 138092305 138092327 -64993205 + AT_rich Low_complexity Low_complexity 1 22 0 1368 79 0 0 chr5 138092355 138092520 -64993012 + AluSq SINE Alu 50 214 -99 574 132 28 160 chr5 138092540 138092599 -64992933 - MSTC LTR MaLR -303 125 94 1743 178 7 10 chr5 138092599 138092908 -64992624 + AluJo SINE Alu 5 312 0 574 132 28 160 chr5 138092908 138092992 -64992540 - MSTC LTR MaLR -334 94 1 2026 124 10 0 chr5 138093360 138093650 -64991882 - AluSg SINE Alu -17 293 1 2162 107 24 3 chr5 138094188 138094479 -64991053 - AluSq SINE Alu -16 297 1 1845 278 105 24 chr5 138094942 138096103 -64989429 + L2 LINE L2 2033 3313 0 1253 187 0 46 chr5 138096129 138096370 -64989162 + AluJo SINE Alu 1 230 -82 360 242 102 60 chr5 138096386 138096601 -64988931 + HAL1 LINE L1 2278 2501 -6 200 216 0 0 chr5 138100890 138100927 -64984605 + MIR SINE MIR 117 153 -109 186 255 206 29 chr5 138101199 138101301 -64984231 + L2 LINE L2 3138 3257 -15 2201 119 0 0 chr5 138102191 138102493 -64983039 + AluSx SINE Alu 1 302 -10 654 247 41 6 chr5 138102614 138102692 -64982840 - Tigger5 DNA MER2_type 0 2323 2249 1573 143 24 14 chr5 138102692 138102979 -64982553 - AluSx SINE Alu -22 290 1 654 247 41 6 chr5 138102979 138103070 -64982462 - Tigger5 DNA MER2_type -74 2249 2148 293 306 82 48 chr5 138103312 138103459 -64982073 - MIR3 SINE MIR 0 208 57 2369 62 7 42 chr5 138103596 138103905 -64981627 + AluY SINE Alu 1 298 -13 2889 136 53 52 chr5 138103917 138104378 -64981154 + L1MB3 LINE L1 5651 6115 -68 2215 103 10 3 chr5 138104378 138104679 -64980853 + AluSq SINE Alu 1 303 -10 2889 136 53 52 chr5 138104679 138104741 -64980791 + L1MB3 LINE L1 6115 6175 -8 2276 93 0 0 chr5 138105208 138105508 -64980024 + AluY SINE Alu 1 300 -11 1321 211 25 0 chr5 138105724 138106038 -64979494 + AluJb SINE Alu 1 321 0 2337 103 0 7 chr5 138106060 138106370 -64979162 + AluSq SINE Alu 4 311 -2 230 254 0 42 chr5 138107386 138107457 -64978075 + MLT1L LTR MaLR 7 74 -541 466 308 49 67 chr5 138107557 138107944 -64977588 + MLT1J LTR MaLR 112 491 -20 593 195 23 23 chr5 138109106 138109234 -64976298 - MLT1J LTR MaLR 0 511 384 479 258 83 54 chr5 138109208 138109320 -64976212 - MLT1J LTR MaLR -135 315 208 * 2506 76 0 0 chr5 138109320 138109624 -64975908 + AluSc SINE Alu 1 304 -5 479 258 83 54 chr5 138109624 138109844 -64975688 - MLT1J LTR MaLR -242 208 3 859 104 0 7 chr5 138110164 138110299 -64975233 + (TTCC)n Simple_repeat Simple_repeat 3 136 0 1933 109 53 0 chr5 138110301 138110567 -64974965 - AluSx SINE Alu -30 282 3 1708 196 0 3 chr5 138111983 138112279 -64973253 + AluJb SINE Alu 9 303 -9 374 299 6 51 chr5 138112699 138112772 -64972760 + MIR SINE MIR 111 175 -87 2440 73 3 16 chr5 138112772 138113088 -64972444 + AluSp SINE Alu 1 312 -1 374 299 6 51 chr5 138113088 138113171 -64972361 + MIR SINE MIR 175 260 -2 1833 59 0 0 chr5 138113259 138113480 -64972052 - L1MA1 LINE L1 -7 6295 6075 1515 130 31 0 chr5 138113706 138113929 -64971603 + MER30 DNA MER1_type 1 230 0 23 68 0 0 chr5 138114031 138114075 -64971457 + AT_rich Low_complexity Low_complexity 1 44 0 1548 154 40 26 chr5 138114520 138114816 -64970716 - AluJo SINE Alu 0 305 6 257 238 63 16 chr5 138115070 138115133 -64970399 + L2 LINE L2 3200 3265 -7 781 296 118 33 chr5 138115721 138116168 -64969364 - L2 LINE L2 -94 3219 2703 1990 136 7 7 chr5 138116168 138116463 -64969069 + AluSx SINE Alu 1 295 -17 781 296 118 33 chr5 138116463 138116642 -64968890 - L2 LINE L2 -610 2703 2541 496 244 16 31 chr5 138116779 138116906 -64968626 + L2 LINE L2 3184 3308 -5 2138 112 11 0 chr5 138117044 138117329 -64968203 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr5 138117333 138117353 -64968179 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 3112 168 24 27 chr5 138119794 138120389 -64965143 + L1MB7 LINE L1 5592 6184 0 1466 226 47 0 chr5 138121179 138121475 -64964057 + AluJb SINE Alu 1 310 -2 1512 132 128 137 chr5 138121686 138121788 -64963744 + MSTB2 LTR MaLR 1 102 -355 2356 87 0 26 chr5 138121788 138122099 -64963433 + AluY SINE Alu 2 304 -7 1512 132 128 137 chr5 138122099 138122258 -64963274 + MSTB2 LTR MaLR 102 261 -196 2216 105 3 7 chr5 138122258 138122552 -64962980 - AluSp SINE Alu -20 293 1 1512 132 128 137 chr5 138122552 138122699 -64962833 + MSTB2 LTR MaLR 261 408 -49 2252 101 0 3 chr5 138122699 138122997 -64962535 + AluSg SINE Alu 1 297 -13 1512 132 128 137 chr5 138122997 138123047 -64962485 + MSTB2 LTR MaLR 408 457 0 2590 147 95 32 chr5 138123293 138123471 -64962061 + L1MB4 LINE L1 5603 5768 -412 486 0 0 0 chr5 138123471 138123525 -64962007 + (TA)n Simple_repeat Simple_repeat 2 55 0 2590 147 95 32 chr5 138123525 138123882 -64961650 + L1MB4 LINE L1 5768 6172 -8 1189 191 47 16 chr5 138124035 138124292 -64961240 + AluJo SINE Alu 1 265 -47 564 77 0 0 chr5 138124298 138124376 -64961156 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 639 128 40 0 chr5 138124476 138124601 -64960931 + GA-rich Low_complexity Low_complexity 3 132 0 303 28 0 0 chr5 138125866 138125902 -64959630 + (CA)n Simple_repeat Simple_repeat 2 37 0 500 159 62 0 chr5 138126444 138126557 -64958975 - L1MC4 LINE L1 -5 8037 7918 898 214 31 5 chr5 138126697 138126912 -64958620 - L1MC4 LINE L1 -96 7712 7585 801 171 0 29 chr5 138126913 138127053 -64958479 - FRAM SINE Alu -29 147 12 1574 205 68 36 chr5 138127058 138127472 -64958060 - L1MC4 LINE L1 -334 7708 7282 282 276 58 45 chr5 138128506 138128662 -64956870 + MIR SINE MIR 104 261 -1 1115 156 58 0 chr5 138128960 138129133 -64956399 + MER5A DNA MER1_type 3 185 -4 198 0 0 0 chr5 138130073 138130095 -64955437 + (A)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr5 138130885 138130911 -64954621 + (TG)n Simple_repeat Simple_repeat 1 26 0 497 279 188 10 chr5 138131662 138131859 -64953673 - MIR SINE MIR -10 252 21 240 150 0 0 chr5 138132671 138132711 -64952821 + MLT1B LTR MaLR 333 372 -18 926 196 79 152 chr5 138132712 138133018 -64952514 + MER34C LTR ERV1 37 281 -304 1800 187 59 59 chr5 138133018 138133371 -64952161 - MSTB2 LTR MaLR -2 455 100 2459 80 3 0 chr5 138133371 138133672 -64951860 - AluSc SINE Alu -7 302 1 1800 187 59 59 chr5 138133672 138133773 -64951759 - MSTB2 LTR MaLR -356 101 1 926 196 79 152 chr5 138133773 138134058 -64951474 + MER34C LTR ERV1 281 585 0 1719 175 57 11 chr5 138134221 138134587 -64950945 - LTR37A LTR ERV1 -38 388 6 1018 268 68 59 chr5 138134907 138135348 -64950184 - LTR67 LTR ERVL 0 557 113 199 348 156 7 chr5 138135600 138135735 -64949797 - L2 LINE L2 -5 3267 3113 811 198 40 53 chr5 138135766 138135993 -64949539 + AluJo SINE Alu 86 309 -3 4232 125 34 70 chr5 138138018 138138637 -64946895 - LTR1 LTR ERV1 0 785 145 1820 120 0 109 chr5 138138637 138138819 -64946713 - AluSx SINE Alu -1 311 111 2461 81 0 0 chr5 138138819 138139128 -64946404 - AluY SINE Alu -2 309 1 2124 115 0 22 chr5 138139135 138139448 -64946084 - AluSg1 SINE Alu 0 309 4 1820 120 0 109 chr5 138139448 138139606 -64945926 - AluSx SINE Alu -207 105 1 4232 125 34 70 chr5 138139606 138139800 -64945732 - LTR1 LTR ERV1 -640 145 1 525 332 112 45 chr5 138139987 138140737 -64944795 + L2 LINE L2 1914 2713 -601 277 338 133 58 chr5 138140838 138141220 -64944312 + L2 LINE L2 2861 3271 -1 180 305 34 0 chr5 138141224 138141283 -64944249 - L3 LINE CR1 -103 1474 1414 225 309 29 0 chr5 138141519 138141587 -64943945 - MER91B DNA MER1_type -115 75 6 1578 220 132 67 chr5 138141588 138142097 -64943435 + MLT1F LTR MaLR 1 542 0 2206 118 0 0 chr5 138143387 138143684 -64941848 - AluSg SINE Alu -13 297 1 3987 149 19 18 chr5 138143770 138144526 -64941006 + L1MC1 LINE L1 5173 5929 -404 465 274 204 11 chr5 138144950 138145136 -64940396 + MIR SINE MIR 7 228 -34 2526 67 6 6 chr5 138148924 138149237 -64936295 + AluSp SINE Alu 1 313 0 388 99 28 14 chr5 138149243 138149314 -64936218 + A-rich Low_complexity Low_complexity 3 74 0 360 207 0 0 chr5 138149575 138149686 -64935846 + (TA)n Simple_repeat Simple_repeat 1 111 0 1845 210 170 69 chr5 138150160 138150860 -64934672 - LTR41 LTR ERVL 0 773 3 2054 53 19 26 chr5 138251800 138252065 -64833467 - AluY SINE Alu -6 305 43 383 344 60 73 chr5 138252316 138252769 -64832763 - L2 LINE L2 0 3272 2826 748 187 87 18 chr5 138253583 138253808 -64831724 - MSTC LTR MaLR -136 260 1 510 250 92 0 chr5 138255276 138255396 -64830136 + L1ME3A LINE L1 5558 5688 -482 495 247 205 22 chr5 138255605 138255963 -64829569 + L1ME3A LINE L1 5696 6130 -40 1095 219 37 123 chr5 138255963 138256474 -64829058 + MLT1C LTR MaLR 1 467 0 258 125 0 0 chr5 138256990 138257038 -64828494 + (TA)n Simple_repeat Simple_repeat 2 49 0 421 222 74 59 chr5 138257038 138257241 -64828291 - LTR37A LTR ERV1 -220 206 1 905 263 130 21 chr5 138257514 138257852 -64827680 + L1ME3A LINE L1 5791 6165 -5 260 209 75 0 chr5 138257943 138258010 -64827522 + L1ME4a LINE L1 5990 6061 -60 967 195 9 83 chr5 138258110 138258382 -64827150 - MLT2B1 LTR ERVL -47 499 267 634 255 11 23 chr5 138258362 138258578 -64826954 - MLT2B3 LTR ERVL -123 431 267 * 1431 210 86 54 chr5 138258558 138259077 -64826455 - MLT2B1 LTR ERVL -112 442 1 2253 86 17 3 chr5 138259754 138260045 -64825487 + AluSc SINE Alu 1 295 -14 2091 101 40 3 chr5 138260080 138260377 -64825155 + AluSq SINE Alu 1 308 -5 188 362 14 57 chr5 138261109 138261250 -64824282 + MIR SINE MIR 9 143 -119 311 282 188 13 chr5 138261879 138261955 -64823577 + MIR SINE MIR 2 63 -199 850 255 16 0 chr5 138261955 138262139 -64823393 - MER5A DNA MER1_type 0 189 3 311 282 188 13 chr5 138262139 138262211 -64823321 + MIR SINE MIR 63 176 -86 241 215 66 141 chr5 138262469 138262590 -64822942 + MLT1L LTR MaLR 1 112 -503 934 290 110 24 chr5 138262643 138263026 -64822506 + MLT1L LTR MaLR 200 615 0 297 363 25 19 chr5 138263084 138263244 -64822288 + MIR3 SINE MIR 48 208 0 27 0 0 0 chr5 138263867 138263894 -64821638 + AT_rich Low_complexity Low_complexity 1 27 0 217 256 0 58 chr5 138264223 138264309 -64821223 + T-rich Low_complexity Low_complexity 2 82 0 28 91 0 0 chr5 138264999 138265076 -64820456 + AT_rich Low_complexity Low_complexity 1 77 0 202 282 0 59 chr5 138265473 138265558 -64819974 + MIR SINE MIR 183 262 0 1057 277 107 43 chr5 138265569 138266035 -64819497 - MLT1K LTR MaLR -6 582 87 1000 186 33 0 chr5 138267575 138267758 -64817774 + MER5A DNA MER1_type 1 189 0 726 244 81 0 chr5 138267797 138267969 -64817563 - MER5A DNA MER1_type -3 186 1 195 235 0 0 chr5 138268954 138269005 -64816527 + (TTTA)n Simple_repeat Simple_repeat 1 51 0 623 297 16 16 chr5 138269337 138269522 -64816010 - L2 LINE L2 0 3313 3129 1299 113 10 0 chr5 138269624 138269827 -64815705 - L1PA14 LINE L1 -3 6158 5954 327 335 33 16 chr5 138270409 138270591 -64814941 + L1P LINE L1 4006 4190 -1956 435 325 53 0 chr5 138272136 138272287 -64813245 - MIR SINE MIR -3 259 101 1966 147 13 3 chr5 138272292 138272592 -64812940 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr5 138273100 138273124 -64812408 + AT_rich Low_complexity Low_complexity 1 24 0 301 224 82 0 chr5 138274139 138274237 -64811295 + L1MC5 LINE L1 7807 7912 -49 546 77 13 0 chr5 138275573 138275651 -64809881 + MADE1 DNA Mariner 1 79 -1 882 208 79 46 chr5 138276232 138276448 -64809084 + MER58A DNA MER1_type 1 223 -1 21 36 0 0 chr5 138277192 138277220 -64808312 + AT_rich Low_complexity Low_complexity 1 28 0 1208 175 27 117 chr5 138277359 138277760 -64807772 - MLT1A1 LTR MaLR 0 365 1 188 274 16 65 chr5 138277770 138277832 -64807700 - L2 LINE L2 0 3313 3255 260 170 11 85 chr5 138278293 138278387 -64807145 - LTR37A LTR ERV1 0 426 340 479 163 8 0 chr5 138278413 138278536 -64806996 + (TA)n Simple_repeat Simple_repeat 1 124 0 322 229 96 0 chr5 138278536 138278619 -64806913 + L1MC4 LINE L1 6613 6703 -1339 630 166 0 0 chr5 138278621 138278796 -64806736 + (TA)n Simple_repeat Simple_repeat 2 176 0 25 0 0 0 chr5 138278796 138278821 -64806711 + AT_rich Low_complexity Low_complexity 1 25 0 290 326 157 6 chr5 138279570 138279742 -64805790 - MIR SINE MIR -37 225 28 203 343 98 10 chr5 138279767 138279869 -64805663 - L2 LINE L2 -8 3264 3154 187 319 43 87 chr5 138280055 138280193 -64805339 - L2 LINE L2 -8 3264 3133 275 283 144 43 chr5 138281079 138281566 -64803966 - L1MC/D LINE L1 -1921 5887 5352 990 124 40 34 chr5 138282117 138282294 -64803238 + FRAM SINE Alu 1 176 0 264 250 13 0 chr5 138282550 138282626 -64802906 + MIR SINE MIR 9 85 -177 669 242 31 41 chr5 138282655 138282849 -64802683 + MLT1F1 LTR MaLR 360 551 -16 376 269 200 0 chr5 138282856 138283016 -64802516 + MIR SINE MIR 69 260 -2 23 0 0 0 chr5 138283196 138283219 -64802313 + AT_rich Low_complexity Low_complexity 1 23 0 215 236 73 0 chr5 138283537 138283592 -64801940 - MIR3 SINE MIR -19 189 131 239 321 54 27 chr5 138286201 138286313 -64799219 - MLT1L LTR MaLR -350 265 151 305 229 29 0 chr5 138287141 138287211 -64798321 - MLT1K LTR MaLR -8 580 509 2267 129 0 0 chr5 138287340 138287651 -64797881 - AluSx SINE Alu -1 311 1 2144 123 25 30 chr5 138290373 138290739 -64794793 - THE1B LTR MaLR 0 364 1 202 361 19 51 chr5 138291231 138291389 -64794143 + L2 LINE L2 2878 3030 -242 429 111 44 11 chr5 138293618 138293708 -64791824 + CT-rich Low_complexity Low_complexity 3 95 0 2038 131 24 0 chr5 138294087 138294367 -64791165 + AluSq SINE Alu 1 290 -23 270 73 0 0 chr5 138294367 138294408 -64791124 + (CA)n Simple_repeat Simple_repeat 2 42 0 1655 254 26 2 chr5 138294918 138295457 -64790075 + L1M4 LINE L1 3142 3693 -2453 26278 130 16 59 chr5 138295460 138301922 -64783610 + L1PA8 LINE L1 1 6171 -1 3535 213 28 43 chr5 138301951 138303076 -64782456 + L1M4 LINE L1 3685 4793 -1353 254 314 22 7 chr5 138303428 138303565 -64781967 + L1MC4 LINE L1 6461 6599 -1443 1757 255 73 41 chr5 138303687 138303760 -64781772 + L1MC4 LINE L1 6709 6778 -1264 2078 110 3 13 chr5 138303760 138304084 -64781448 + AluSx SINE Alu 1 321 0 1757 255 73 41 chr5 138304084 138304859 -64780673 + L1MC4 LINE L1 6778 7587 -455 634 204 36 100 chr5 138304873 138305093 -64780439 - MER58C DNA MER1_type 0 215 10 406 343 58 10 chr5 138305098 138305390 -64780142 + L1MC4 LINE L1 7599 7904 -138 300 305 57 21 chr5 138305691 138305832 -64779700 - MIR3 SINE MIR -9 199 54 23 54 0 0 chr5 138307524 138307561 -64777971 + AT_rich Low_complexity Low_complexity 1 37 0 264 281 20 0 chr5 138308510 138308599 -64776933 - MIR SINE MIR -93 115 23 229 360 69 36 chr5 138309627 138309933 -64775599 + L2 LINE L2 2454 2769 -545 625 241 108 0 chr5 138310085 138310251 -64775281 - MER5A DNA MER1_type -2 187 4 1316 189 0 76 chr5 138310313 138310615 -64774917 + AluSx SINE Alu 1 279 -33 255 31 0 0 chr5 138310615 138310647 -64774885 + (CA)n Simple_repeat Simple_repeat 1 32 0 243 0 0 0 chr5 138310653 138310680 -64774852 + (T)n Simple_repeat Simple_repeat 1 27 0 273 292 192 23 chr5 138310758 138310888 -64774644 + L2 LINE L2 3121 3272 0 214 322 203 25 chr5 138311761 138311886 -64773646 - L2 LINE L2 -637 2677 2576 1888 205 40 15 chr5 138311886 138311923 -64773609 - MLT2D LTR ERVL -4 410 375 324 83 0 0 chr5 138311923 138311971 -64773561 + (TG)n Simple_repeat Simple_repeat 1 48 0 1888 205 40 15 chr5 138311971 138312333 -64773199 - MLT2D LTR ERVL -39 375 1 214 322 203 25 chr5 138312333 138312443 -64773089 - L2 LINE L2 -738 2576 2400 180 289 0 0 chr5 138312487 138312532 -64773000 - L2 LINE L2 -6 3307 3263 207 239 0 0 chr5 138312698 138312744 -64772788 + L2 LINE L2 3261 3306 -7 846 192 141 15 chr5 138313299 138313497 -64772035 + MER58A DNA MER1_type 2 224 0 2472 163 36 5 chr5 138313639 138314050 -64771482 + MSTB LTR MaLR 3 426 0 1950 100 0 0 chr5 138314275 138314526 -64771006 + AluSq SINE Alu 56 306 -7 229 229 0 0 chr5 138315371 138315419 -64770113 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 450 231 37 60 chr5 138315435 138315569 -64769963 - L2 LINE L2 -3 3310 3180 209 286 57 29 chr5 138315594 138315699 -64769833 + MIR SINE MIR 118 225 -37 1061 211 14 0 chr5 138315814 138316027 -64769505 - MER58A DNA MER1_type 0 224 9 184 244 0 122 chr5 138316619 138316663 -64768869 - MIR SINE MIR 0 262 231 1684 192 0 7 chr5 138316663 138316960 -64768572 - AluJo SINE Alu -17 295 1 184 244 0 122 chr5 138316960 138316997 -64768535 - MIR SINE MIR -31 231 191 24 0 0 0 chr5 138317611 138317635 -64767897 + AT_rich Low_complexity Low_complexity 1 24 0 622 239 98 30 chr5 138317991 138318206 -64767326 - MIR SINE MIR -35 227 2 1594 223 126 26 chr5 138318790 138319257 -64766275 + LTR40a LTR ERVL 6 519 0 295 188 17 94 chr5 138319501 138319618 -64765914 + L1M1 LINE L1 16 123 -7442 608 217 72 0 chr5 138319664 138319802 -64765730 + L1M1 LINE L1 117 264 -7301 10126 162 21 10 chr5 138319815 138321093 -64764439 + L1M1 LINE L1 490 1794 -5771 237 33 0 0 chr5 138321093 138321123 -64764409 + (GA)n Simple_repeat Simple_repeat 1 30 0 10126 162 21 10 chr5 138321123 138321633 -64763899 + L1M1 LINE L1 1794 2297 -5268 238 277 0 0 chr5 138324457 138324504 -64761028 - L2 LINE L2 -9 3304 3258 237 322 0 0 chr5 138324657 138324716 -64760816 - L2 LINE L2 -63 3209 3151 207 69 0 0 chr5 138326511 138326540 -64758992 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 217 333 138 24 chr5 138327139 138327385 -64758147 - L2 LINE L2 0 3313 3040 537 64 0 0 chr5 138331175 138331253 -64754279 + (TC)n Simple_repeat Simple_repeat 1 78 0 369 0 0 0 chr5 138331252 138331293 -64754239 + (CA)n Simple_repeat Simple_repeat 1 41 0 * 183 80 0 0 chr5 138332777 138332802 -64752730 + (TG)n Simple_repeat Simple_repeat 1 25 0 572 145 4 185 chr5 138332861 138333088 -64752444 - MER53 DNA DNA -2 187 2 239 67 0 0 chr5 138335272 138335302 -64750230 + (T)n Simple_repeat Simple_repeat 1 30 0 258 224 0 30 chr5 138337286 138337353 -64748179 + L2 LINE L2 3246 3310 -3 657 277 40 5 chr5 138337407 138337609 -64747923 + MLT1J LTR MaLR 1 209 -302 192 97 0 0 chr5 138337792 138337823 -64747709 + (A)n Simple_repeat Simple_repeat 1 31 0 523 246 8 16 chr5 138337872 138337994 -64747538 - MER45A DNA AcHobo 0 178 58 463 327 126 56 chr5 138338027 138338489 -64747043 + L2 LINE L2 2806 3299 -14 2327 96 20 0 chr5 138338559 138338860 -64746672 - AluSg SINE Alu -3 307 1 1454 229 97 31 chr5 138339077 138339400 -64746132 + MER110A LTR ERV1 3 348 -129 2303 107 62 0 chr5 138339400 138339755 -64745777 + MER51B LTR ERV1 1 377 0 1454 229 97 31 chr5 138339755 138339895 -64745637 + MER110A LTR ERV1 348 477 0 924 165 44 0 chr5 138340124 138340306 -64745226 + MER33 DNA MER1_type 3 192 -132 248 271 85 25 chr5 138340355 138340473 -64745059 + MER33 DNA MER1_type 229 353 -10 6950 62 6 1 chr5 138341623 138342928 -64742604 + L1PA7 LINE L1 4844 6152 -2 227 310 53 18 chr5 138343842 138343955 -64741577 - MLT1K LTR MaLR -34 554 438 2014 138 23 74 chr5 138344092 138344484 -64741048 + MLT1B LTR MaLR 1 372 -18 242 330 18 9 chr5 138344671 138344780 -64740752 - MIR SINE MIR -101 161 52 23 54 0 0 chr5 138346401 138346438 -64739094 + AT_rich Low_complexity Low_complexity 1 37 0 408 219 92 50 chr5 138346521 138346640 -64738892 + MIR3 SINE MIR 83 206 -2 660 260 83 42 chr5 138348133 138348853 -64736679 - L1ME LINE L1 -539 5631 4881 1203 264 115 2 chr5 138348936 138349352 -64736180 - MER110A LTR ERV1 -5 463 1 1316 277 75 46 chr5 138349405 138350465 -64735067 - L1ME LINE L1 -1316 4830 3740 1994 159 0 0 chr5 138350472 138350774 -64734758 - AluSx SINE Alu -10 302 1 9865 210 26 21 chr5 138351723 138354324 -64731208 + L1MB2 LINE L1 2879 5487 -684 1345 86 0 11 chr5 138354324 138354498 -64731034 + AluSg1 SINE Alu 1 172 -137 3054 164 31 0 chr5 138354507 138355051 -64730481 + L1MB2 LINE L1 5494 6054 -117 491 262 58 26 chr5 138355460 138355651 -64729881 - MER117 DNA MER1_type 0 197 1 216 134 34 76 chr5 138355934 138356053 -64729479 + (TA)n Simple_repeat Simple_repeat 2 115 0 275 148 76 2 chr5 138356053 138356125 -64729407 + L1M3 LINE L1 5775 5849 -322 209 138 17 52 chr5 138356162 138356220 -64729312 + (TA)n Simple_repeat Simple_repeat 2 57 0 226 152 0 22 chr5 138356489 138356522 -64729010 + (TG)n Simple_repeat Simple_repeat 2 35 -11 3315 151 6 7 chr5 138356522 138357065 -64728467 + MER34 LTR ERV1 1 542 0 226 152 0 22 chr5 138357065 138357077 -64728455 + (TG)n Simple_repeat Simple_repeat 35 46 0 517 221 21 0 chr5 138359360 138359455 -64726077 - MER20 DNA MER1_type -24 195 99 5783 212 71 16 chr5 138359510 138360950 -64724582 - MER45R DNA AcHobo -3 1578 4 503 43 14 0 chr5 138361534 138361604 -64723928 + (TG)n Simple_repeat Simple_repeat 1 71 0 590 293 122 30 chr5 138361693 138362257 -64723275 - L2 LINE L2 -21 3292 2677 180 0 0 0 chr5 138363404 138363424 -64722108 + (TTG)n Simple_repeat Simple_repeat 2 21 0 270 0 0 0 chr5 138363777 138363807 -64721725 + (TA)n Simple_repeat Simple_repeat 2 31 0 4055 181 60 38 chr5 138364487 138365437 -64720095 - L1MC3 LINE L1 -7 7778 6808 * 5468 145 32 19 chr5 138365433 138366084 -64719448 - L1PA16 LINE L1 -1 6165 5524 216 0 0 0 chr5 138366084 138366108 -64719424 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5468 145 32 19 chr5 138366108 138366140 -64719392 - L1PA16 LINE L1 -642 5524 5494 2193 101 7 3 chr5 138366140 138366446 -64719086 + AluSc SINE Alu 1 307 -2 5468 145 32 19 chr5 138366446 138367238 -64718294 - L1PA16 LINE L1 -672 5494 4361 1835 170 36 17 chr5 138367238 138367596 -64717936 - L1MC3 LINE L1 -967 6818 4639 24 0 0 0 chr5 138368575 138368599 -64716933 + AT_rich Low_complexity Low_complexity 1 24 0 452 318 23 0 chr5 138372106 138372235 -64713297 + MLT1K LTR MaLR 97 228 -360 484 257 64 21 chr5 138372340 138372527 -64713005 + MLT1K LTR MaLR 386 580 -8 22 35 0 0 chr5 138372940 138372969 -64712563 + AT_rich Low_complexity Low_complexity 1 29 0 2514 118 8 0 chr5 138373121 138373493 -64712039 - THE1C LTR MaLR 0 375 1 294 249 102 49 chr5 138373622 138373865 -64711667 + L1ME3A LINE L1 5713 5968 -202 582 214 0 0 chr5 138373901 138374013 -64711519 + FLAM_C SINE Alu 11 122 -21 21 0 0 0 chr5 138374013 138374034 -64711498 + AT_rich Low_complexity Low_complexity 1 21 0 8295 115 18 18 chr5 138374207 138375507 -64710025 - HSMAR2 DNA Mariner 0 1302 3 13181 185 16 25 chr5 138376097 138376262 -64709270 - L1PA15 LINE L1 -2 6163 5998 2036 153 3 0 chr5 138376262 138376570 -64708962 - AluJb SINE Alu -2 310 2 13181 185 16 25 chr5 138376570 138380284 -64705248 - L1PA15 LINE L1 -167 5998 2324 344 283 19 38 chr5 138380901 138381060 -64704472 - L1M2 LINE L1 -6534 315 160 730 232 22 80 chr5 138381110 138381386 -64704146 + MIR SINE MIR 2 261 -1 5426 163 26 23 chr5 138381993 138383736 -64701796 - L1MA5 LINE L1 0 6300 4546 199 366 84 0 chr5 138384353 138384424 -64701108 + L2 LINE L2 3157 3233 -39 227 259 0 0 chr5 138385272 138385326 -64700206 + (TG)n Simple_repeat Simple_repeat 2 55 0 288 53 0 0 chr5 138386923 138386961 -64698571 + (TC)n Simple_repeat Simple_repeat 1 38 0 294 211 202 0 chr5 138387204 138387318 -64698214 - L1ME4a LINE L1 -3 6118 5982 1890 148 63 26 chr5 138387635 138387986 -64697546 - THE1B LTR MaLR 0 364 1 11521 101 5 0 chr5 138387986 138389558 -64695974 - THE1B-int LTR MaLR 0 1580 1 1940 144 36 30 chr5 138389558 138389920 -64695612 - THE1B LTR MaLR 0 364 1 1297 226 104 95 chr5 138390828 138391182 -64694350 - L1MC4a LINE L1 -1886 5922 5558 1256 232 169 43 chr5 138391182 138391738 -64693794 + MLT1E2 LTR MaLR 1 626 0 1297 226 104 95 chr5 138391738 138392024 -64693508 - L1MC4a LINE L1 -2250 5558 5276 1133 245 94 41 chr5 138393576 138393968 -64691564 + MLT1D LTR MaLR 91 503 -2 27 0 0 0 chr5 138394238 138394265 -64691267 + AT_rich Low_complexity Low_complexity 1 27 0 232 271 0 0 chr5 138394893 138394941 -64690591 - L2 LINE L2 -5 3308 3261 2455 60 0 35 chr5 138395716 138396033 -64689499 - AluY SINE Alu -5 306 1 802 284 61 11 chr5 138396715 138397074 -64688458 + L1M4 LINE L1 4455 4831 -1315 227 193 35 35 chr5 138397175 138397232 -64688300 + MIR SINE MIR 130 186 -76 363 358 75 8 chr5 138397232 138397682 -64687850 - L1ME LINE L1 -733 5431 4942 342 215 151 11 chr5 138398645 138398738 -64686794 + L2 LINE L2 3208 3313 0 201 300 69 69 chr5 138398742 138398975 -64686557 + L2 LINE L2 2028 2260 -1054 223 273 91 30 chr5 138398980 138399079 -64686453 + MER5A DNA MER1_type 2 106 -83 2129 102 7 0 chr5 138399096 138399379 -64686153 + AluSq SINE Alu 1 285 -28 253 323 176 15 chr5 138399827 138400218 -64685314 + L2 LINE L2 2618 3070 -243 2524 47 0 28 chr5 138400870 138401188 -64684344 - AluY SINE Alu -2 309 1 214 283 96 87 chr5 138401643 138401873 -64683659 + L2 LINE L2 3082 3313 0 201 292 15 15 chr5 138403105 138403170 -64682362 - MIR3 SINE MIR -129 79 15 1736 178 0 3 chr5 138403414 138403706 -64681826 + AluJb SINE Alu 13 303 -9 22 0 0 0 chr5 138403713 138403735 -64681797 + AT_rich Low_complexity Low_complexity 1 22 0 363 279 51 51 chr5 138403801 138403959 -64681573 + MER5B DNA MER1_type 1 158 -20 180 0 0 0 chr5 138405949 138405969 -64679563 + (GAAAA)n Simple_repeat Simple_repeat 1 20 0 329 351 146 0 chr5 138406511 138406716 -64678816 + MIR SINE MIR 3 237 -25 586 331 0 6 chr5 138407291 138407460 -64678072 + MER5B DNA MER1_type 8 175 -3 2392 147 20 0 chr5 138407491 138407886 -64677646 - MER57A LTR ERV1 0 403 1 704 286 133 29 chr5 138408260 138408803 -64676729 + L2 LINE L2 2622 3233 -39 207 260 0 0 chr5 138409035 138409085 -64676447 + L2 LINE L2 3263 3312 -1 378 296 124 43 chr5 138409169 138409213 -64676319 + MER63A DNA MER1_type 1 40 -1648 195 42 0 0 chr5 138409213 138409237 -64676295 + (CAA)n Simple_repeat Simple_repeat 2 25 0 378 296 124 43 chr5 138409237 138409378 -64676154 + MER63A DNA MER1_type 40 201 -9 184 345 0 0 chr5 138409612 138409670 -64675862 + MIR3 SINE MIR 111 168 -40 515 256 56 28 chr5 138411603 138411818 -64673714 - MLT1K LTR MaLR 0 588 368 2615 142 26 0 chr5 138412279 138412696 -64672836 + MSTA LTR MaLR 1 428 0 687 281 53 0 chr5 138412824 138413070 -64672462 + MIR SINE MIR 4 262 0 237 286 95 0 chr5 138413559 138413622 -64671910 - L2 LINE L2 -42 3230 3162 527 343 96 22 chr5 138414350 138414662 -64670870 + L2 LINE L2 2936 3270 -2 286 250 9 37 chr5 138415070 138415178 -64670354 + GA-rich Low_complexity Low_complexity 1 105 0 21 0 0 0 chr5 138417226 138417247 -64668285 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 138417393 138417414 -64668118 + AT_rich Low_complexity Low_complexity 1 21 0 299 241 43 101 chr5 138417508 138417765 -64667767 - L1MC4 LINE L1 0 8042 7801 997 188 34 183 chr5 138417794 138418331 -64667201 - L1ME2 LINE L1 -29 6135 5679 32 26 0 0 chr5 138419550 138419589 -64665943 + AT_rich Low_complexity Low_complexity 1 39 0 398 69 17 0 chr5 138420206 138420264 -64665268 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 599 249 71 18 chr5 138420585 138420754 -64664778 + MER5B DNA MER1_type 1 178 0 199 277 64 53 chr5 138422460 138422554 -64662978 - L2 LINE L2 -35 3237 3143 428 312 4 78 chr5 138423234 138423468 -64662064 + MIR SINE MIR 6 214 -48 378 336 18 0 chr5 138424782 138424895 -64660637 - MIR SINE MIR -108 154 40 830 208 60 0 chr5 138425210 138425378 -64660154 - MER45A DNA AcHobo 0 178 1 359 291 67 17 chr5 138427962 138428141 -64657391 - LTR33 LTR ERVL -6 515 328 434 248 118 12 chr5 138428216 138428377 -64657155 - LTR33 LTR ERVL -343 178 1 604 76 0 0 chr5 138430485 138430564 -64654968 + MADE1 DNA Mariner 2 80 0 1650 191 17 14 chr5 138431051 138431344 -64654188 + AluJb SINE Alu 12 305 -7 613 75 0 0 chr5 138432136 138432216 -64653316 - MADE1 DNA Mariner 0 80 1 22 35 0 0 chr5 138432264 138432293 -64653239 + AT_rich Low_complexity Low_complexity 1 29 0 234 266 147 56 chr5 138432755 138432898 -64652634 + L2 LINE L2 3158 3313 0 414 282 40 0 chr5 138432951 138433075 -64652457 + MER94 DNA DNA 1 129 -5 242 29 29 0 chr5 138434140 138434175 -64651357 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr5 138434786 138434806 -64650726 + (A)n Simple_repeat Simple_repeat 1 20 0 2162 125 13 0 chr5 138436002 138436306 -64649226 - AluJb SINE Alu -2 310 3 24 0 0 0 chr5 138437417 138437441 -64648091 + AT_rich Low_complexity Low_complexity 1 24 0 189 410 60 0 chr5 138438021 138438121 -64647411 + MIR SINE MIR 30 135 -73 2150 133 0 9 chr5 138438432 138438747 -64646785 + AluSx SINE Alu 1 312 0 797 303 84 21 chr5 138439180 138439578 -64645954 - MLT1H LTR MaLR -90 505 70 185 226 19 0 chr5 138439771 138439824 -64645708 + (TA)n Simple_repeat Simple_repeat 1 54 0 996 218 13 18 chr5 138440000 138440229 -64645303 - L1PB4 LINE L1 -4 6152 5925 * 7340 42 1 7 chr5 138440227 138441860 -64643672 - L1PA5 LINE L1 -5 6149 4523 3820 167 53 71 chr5 138441861 138442186 -64643346 - L1PB4 LINE L1 -221 5935 5606 2146 109 3 7 chr5 138442186 138442480 -64643052 - AluY SINE Alu -16 295 3 3820 167 53 71 chr5 138442480 138443429 -64642103 - L1PB4 LINE L1 -550 5606 4667 216 0 0 0 chr5 138443429 138443453 -64642079 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3820 167 53 71 chr5 138443453 138443787 -64641745 - L1PB4 LINE L1 -1489 4667 4328 220 299 0 15 chr5 138444466 138444533 -64640999 + MER5A DNA MER1_type 44 109 -80 2327 119 0 0 chr5 138444579 138444891 -64640641 - AluSx SINE Alu 0 312 1 246 32 0 0 chr5 138445605 138445636 -64639896 + (CA)n Simple_repeat Simple_repeat 1 31 0 1890 183 11 11 chr5 138445647 138446007 -64639525 - MER47A DNA MER2_type 0 366 7 201 39 0 0 chr5 138446010 138446036 -64639496 + (TC)n Simple_repeat Simple_repeat 2 27 0 183 80 0 0 chr5 138446037 138446062 -64639470 + (TG)n Simple_repeat Simple_repeat 2 26 0 1096 201 47 0 chr5 138446098 138446312 -64639220 - MER58A DNA MER1_type 0 224 1 844 308 124 34 chr5 138446398 138446875 -64638657 + MLT1G1 LTR MaLR 76 595 0 445 271 156 0 chr5 138447323 138447515 -64638017 - MIR SINE MIR -11 251 30 1244 128 112 117 chr5 138447523 138447899 -64637633 - THE1C LTR MaLR -1 374 1 9462 115 17 71 chr5 138447899 138449566 -64635966 - THE1C-int LTR MaLR 0 1580 4 1930 140 46 35 chr5 138449569 138449940 -64635592 - THE1C LTR MaLR 0 375 1 215 263 53 18 chr5 138451659 138451716 -64633816 - MIR SINE MIR -20 242 184 509 216 73 134 chr5 138451736 138451968 -64633564 - MER112 DNA MER1_type -9 251 34 25 0 0 0 chr5 138452309 138452334 -64633198 + AT_rich Low_complexity Low_complexity 1 25 0 739 137 43 0 chr5 138453303 138453442 -64632090 - L1MB4 LINE L1 0 6180 6036 22 0 0 0 chr5 138453776 138453798 -64631734 + AT_rich Low_complexity Low_complexity 1 22 0 773 274 143 72 chr5 138453918 138454378 -64631154 - LTR33A LTR ERVL -8 515 23 452 290 118 6 chr5 138454535 138454704 -64630828 + L2 LINE L2 2458 2645 -669 2843 225 87 25 chr5 138454713 138455698 -64629834 - L1ME2 LINE L1 -1 6163 5054 1934 151 0 0 chr5 138455698 138456005 -64629527 - AluSx SINE Alu 0 307 1 2843 225 87 25 chr5 138456005 138456584 -64628948 - L1ME2 LINE L1 -1110 5054 4512 499 169 11 0 chr5 138456584 138456673 -64628859 - MLT1A1 LTR MaLR 0 365 276 258 301 103 29 chr5 138456751 138456887 -64628645 + L2 LINE L2 3163 3308 -5 237 214 31 20 chr5 138456889 138456987 -64628545 + GA-rich Low_complexity Low_complexity 2 100 0 1585 153 43 7 chr5 138457142 138457423 -64628109 + AluJb SINE Alu 2 292 -20 2275 153 104 14 chr5 138457534 138458122 -64627410 + L1M2 LINE L1 4848 5478 -743 334 281 104 15 chr5 138458472 138458607 -64626925 - L1ME LINE L1 -735 5431 5285 275 322 90 19 chr5 138458738 138459148 -64626384 - L1ME LINE L1 -984 5162 4724 23 0 0 0 chr5 138459600 138459623 -64625909 + AT_rich Low_complexity Low_complexity 1 23 0 518 287 30 12 chr5 138459685 138459849 -64625683 + MIR SINE MIR 96 262 0 21 0 0 0 chr5 138460032 138460053 -64625479 + AT_rich Low_complexity Low_complexity 1 21 0 1207 95 84 6 chr5 138461922 138462101 -64623431 - MER30 DNA MER1_type 0 230 38 489 86 0 0 chr5 138462486 138462556 -64622976 - Alu SINE Alu -6 306 237 216 241 13 89 chr5 138463079 138463158 -64622374 - L2 LINE L2 0 3313 3241 196 194 0 30 chr5 138465035 138465102 -64620430 + GA-rich Low_complexity Low_complexity 3 67 0 507 323 71 11 chr5 138465151 138465417 -64620115 - MER102b DNA MER1_type 0 341 60 291 241 0 0 chr5 138466012 138466095 -64619437 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 805 255 64 8 chr5 138466141 138466376 -64619156 - MIR SINE MIR 0 262 15 333 276 208 16 chr5 138466900 138467092 -64618440 - MIR SINE MIR -14 248 20 3013 64 12 101 chr5 138469097 138469584 -64615948 - MLT2A1 LTR ERVL 0 444 1 1028 282 112 23 chr5 138469953 138470428 -64615104 - LTR33 LTR ERVL 0 521 5 352 394 6 0 chr5 138470456 138470616 -64614916 - MIR SINE MIR -70 192 32 630 319 63 0 chr5 138470740 138470978 -64614554 - MIR SINE MIR -5 257 5 256 259 74 19 chr5 138471225 138471333 -64614199 + L2 LINE L2 2343 2456 -858 294 237 97 21 chr5 138471484 138471577 -64613955 + L2 LINE L2 3173 3272 0 1540 98 0 0 chr5 138472910 138473124 -64612408 - L1PA8 LINE L1 -3 6169 5956 4569 144 65 80 chr5 138473149 138473952 -64611580 - L1MA6 LINE L1 -17 6283 5444 625 105 23 0 chr5 138473952 138474038 -64611494 - MLT2A1 LTR ERVL -157 287 200 4569 144 65 80 chr5 138474038 138474461 -64611071 - L1MA6 LINE L1 -856 5444 5016 514 280 185 5 chr5 138475242 138475442 -64610090 - MIR SINE MIR -25 237 2 185 319 14 28 chr5 138475734 138475806 -64609726 + L2 LINE L2 3242 3312 -1 940 287 97 89 chr5 138476333 138476621 -64608911 + L2 LINE L2 2469 2753 -560 1055 100 6 17 chr5 138476621 138476801 -64608731 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 940 287 97 89 chr5 138476801 138476822 -64608710 + L2 LINE L2 2753 2772 -541 2064 143 13 0 chr5 138476822 138477122 -64608410 - AluSx SINE Alu -8 304 1 940 287 97 89 chr5 138477122 138477618 -64607914 + L2 LINE L2 2772 3312 -1 281 339 29 35 chr5 138478542 138478716 -64606816 - MIR3 SINE MIR -5 203 31 1145 239 62 133 chr5 138478773 138479308 -64606224 + MLT1E3 LTR MaLR 1 616 -8 198 71 0 0 chr5 138480017 138480045 -64605487 + (TG)n Simple_repeat Simple_repeat 2 29 0 850 239 114 84 chr5 138480168 138480658 -64604874 + MLT1D LTR MaLR 1 505 0 210 71 0 0 chr5 138480954 138480982 -64604550 + (TAA)n Simple_repeat Simple_repeat 2 29 0 721 208 57 0 chr5 138480985 138481144 -64604388 - MIR SINE MIR -39 223 56 2078 122 7 0 chr5 138481754 138482042 -64603490 - AluSx SINE Alu -22 290 1 262 270 27 0 chr5 138485137 138485211 -64600321 - L1ME2 LINE L1 -103 6061 5986 2010 127 13 32 chr5 138485624 138485940 -64599592 + AluSx SINE Alu 1 310 -2 718 164 0 168 chr5 138485978 138486210 -64599322 - 7SK RNA RNA 0 193 1 25 0 0 0 chr5 138486414 138486439 -64599093 + AT_rich Low_complexity Low_complexity 1 25 0 192 111 0 0 chr5 138486520 138486556 -64598976 + (T)n Simple_repeat Simple_repeat 1 36 0 1163 52 35 0 chr5 138486699 138486873 -64598659 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1623 173 20 23 chr5 138486878 138487179 -64598353 - AluJb SINE Alu -12 300 1 630 223 144 13 chr5 138487193 138487422 -64598110 - MIR SINE MIR -2 260 2 2293 108 14 12 chr5 138487589 138487933 -64597599 - L1PB1 LINE L1 -7 6144 5800 17507 191 71 11 chr5 138487933 138493581 -64591951 - L1PBa LINE L1 -821 6041 1 23 33 0 0 chr5 138494011 138494041 -64591491 + AT_rich Low_complexity Low_complexity 1 30 0 208 68 23 23 chr5 138494047 138494091 -64591441 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 42448 34 22 2 chr5 138494093 138500111 -64585421 - L1PA2 LINE L1 -13 6142 4 754 233 15 29 chr5 138500117 138500323 -64585209 - L1ME2 LINE L1 -18 6146 5944 288 257 29 48 chr5 138500620 138500725 -64584807 + MIR3 SINE MIR 101 203 -5 336 213 115 105 chr5 138500922 138501218 -64584314 - MLT1H1 LTR MaLR -30 525 227 306 0 0 0 chr5 138501226 138501260 -64584272 + (T)n Simple_repeat Simple_repeat 1 34 0 366 249 40 117 chr5 138501260 138501483 -64584049 - MLT1H1 LTR MaLR -325 230 26 2218 86 7 0 chr5 138501483 138501761 -64583771 + AluSg SINE Alu 18 297 -13 366 249 40 117 chr5 138501761 138501786 -64583746 - MLT1H1 LTR MaLR -529 26 1 1773 164 13 26 chr5 138502254 138502559 -64582973 + AluJb SINE Alu 1 301 -11 267 304 174 7 chr5 138502639 138502777 -64582755 + L2 LINE L2 3153 3313 0 185 379 88 33 chr5 138502940 138503122 -64582410 + L2 LINE L2 2456 2647 -667 448 257 171 10 chr5 138503331 138503472 -64582060 - MER5A DNA MER1_type -2 187 15 1361 48 122 0 chr5 138503698 138503887 -64581645 - L1MA1 LINE L1 0 6302 6091 2345 93 0 7 chr5 138506957 138507339 -64578193 - AluSc SINE Alu 0 381 2 22 0 0 0 chr5 138507748 138507770 -64577762 + AT_rich Low_complexity Low_complexity 1 22 0 375 303 56 25 chr5 138509418 138509580 -64575952 - MIR3 SINE MIR -7 201 35 305 47 23 0 chr5 138509936 138509979 -64575553 + (GA)n Simple_repeat Simple_repeat 1 44 0 2205 107 0 19 chr5 138511510 138511827 -64573705 + AluSq SINE Alu 1 311 -2 409 229 127 0 chr5 138512610 138512728 -64572804 + MER99 DNA DNA 2 134 -694 21 82 0 0 chr5 138512766 138512815 -64572717 + AT_rich Low_complexity Low_complexity 1 49 0 2564 220 52 10 chr5 138513349 138513962 -64571570 + MER99 DNA DNA 185 823 -5 398 248 52 13 chr5 138514041 138514194 -64571338 - L1MC5 LINE L1 -30 7931 7773 4017 183 27 6 chr5 138514243 138515320 -64570212 + L1MB7 LINE L1 4913 6017 -167 192 125 0 0 chr5 138515412 138515444 -64570088 + (CA)n Simple_repeat Simple_repeat 1 32 0 1776 131 28 10 chr5 138515446 138515736 -64569796 - Tigger2a DNA MER2_type -2 442 148 755 174 0 0 chr5 138515736 138515857 -64569675 + AluJ SINE Alu 1 121 -191 926 127 0 64 chr5 138515880 138516037 -64569495 - Tigger2a DNA MER2_type -286 148 2 21 0 0 0 chr5 138516037 138516058 -64569474 + AT_rich Low_complexity Low_complexity 1 21 0 1663 64 0 27 chr5 138516059 138516278 -64569254 + AluY SINE Alu 90 302 -9 225 172 69 35 chr5 138516418 138516476 -64569056 + MSTC LTR MaLR 367 426 -2 6214 200 125 38 chr5 138516478 138516746 -64568786 + MLT1A1-int LTR MaLR 1 244 -1491 2665 29 0 16 chr5 138516746 138517059 -64568473 + AluY SINE Alu 1 308 -3 6214 200 125 38 chr5 138517059 138518282 -64567250 + MLT1A1-int LTR MaLR 244 1623 -112 1363 200 32 59 chr5 138518350 138518725 -64566807 + MLT1A1 LTR MaLR 1 365 0 184 323 15 15 chr5 138519358 138519423 -64566109 + MIR SINE MIR 2 66 -196 1169 153 15 5 chr5 138519423 138519619 -64565913 + AluJ SINE Alu 115 312 0 660 236 35 59 chr5 138519622 138519825 -64565707 + MIR SINE MIR 59 256 -6 511 288 46 0 chr5 138520346 138520499 -64565033 - MIR SINE MIR -15 247 88 424 335 62 12 chr5 138520582 138520824 -64564708 - L1M4 LINE L1 -990 5156 4903 327 85 0 0 chr5 138520873 138520920 -64564612 + (TG)n Simple_repeat Simple_repeat 2 48 0 266 297 168 4 chr5 138521565 138521797 -64563735 + LTR50 LTR ERVL 500 769 -26 571 276 97 51 chr5 138524297 138524514 -64561018 + MIR SINE MIR 36 262 0 1371 229 32 18 chr5 138526416 138526905 -64558627 + MLT1E LTR MaLR 1 591 -2 716 193 288 0 chr5 138526965 138527177 -64558355 + MER69 DNA AcHobo 296 568 -1958 * 1152 236 152 13 chr5 138527164 138527540 -64557992 + MER69 DNA AcHobo 1999 2452 -74 5346 35 0 0 chr5 138527540 138528176 -64557356 - L1PA4 LINE L1 -3 6152 5517 1152 236 152 13 chr5 138528176 138528261 -64557271 + MER69 DNA AcHobo 2452 2524 -2 1530 330 112 34 chr5 138528285 138528635 -64556897 - L2 LINE L2 -1342 1972 1651 1310 249 58 79 chr5 138528635 138529189 -64556343 + MLT1F LTR MaLR 1 542 0 1530 330 112 34 chr5 138529189 138530177 -64555355 - L2 LINE L2 -1663 1651 530 2113 129 14 0 chr5 138530727 138531022 -64554510 - AluSx SINE Alu -13 299 1 21 71 0 0 chr5 138531596 138531638 -64553894 + AT_rich Low_complexity Low_complexity 1 42 0 779 284 133 20 chr5 138531641 138531790 -64553742 - L1ME3A LINE L1 -220 5950 5819 1619 189 111 8 chr5 138531790 138532149 -64553383 + MSTD LTR MaLR 1 396 0 779 284 133 20 chr5 138532149 138532488 -64553044 - L1ME3A LINE L1 -351 5819 5407 27 0 0 0 chr5 138532535 138532562 -64552970 + AT_rich Low_complexity Low_complexity 1 27 0 234 289 169 0 chr5 138532979 138533062 -64552470 - MIR3 SINE MIR -1 207 111 644 310 80 4 chr5 138533202 138533441 -64552091 + MIR SINE MIR 5 261 -1 977 195 31 47 chr5 138534374 138534631 -64550901 + MER96B DNA MER1_type? 148 400 -17 252 59 0 0 chr5 138535182 138535216 -64550316 + (TA)n Simple_repeat Simple_repeat 1 34 0 246 163 88 25 chr5 138535273 138535353 -64550179 + HAL1 LINE L1 945 1029 -1478 715 261 85 44 chr5 138535595 138535965 -64549567 + MLT1I LTR MaLR 31 383 -26 1855 159 20 7 chr5 138536449 138536751 -64548781 + AluJo SINE Alu 1 306 -6 397 179 0 0 chr5 138537116 138537183 -64548349 - MER94 DNA DNA -53 81 15 544 343 123 22 chr5 138539450 138539727 -64545805 + L3 LINE CR1 1229 1533 -44 1774 245 83 10 chr5 138540145 138540639 -64544893 + MLT1F LTR MaLR 2 531 -11 312 286 25 50 chr5 138540734 138540853 -64544679 + L2 LINE L2 3197 3312 -1 277 313 43 9 chr5 138541096 138541211 -64544321 + L2 LINE L2 2939 3057 -215 27 0 0 0 chr5 138541280 138541307 -64544225 + AT_rich Low_complexity Low_complexity 1 27 0 2290 121 22 11 chr5 138541353 138541724 -64543808 - THE1C LTR MaLR 0 375 1 319 389 37 0 chr5 138542216 138542324 -64543208 - L2 LINE L2 -10 3262 3151 24 32 0 0 chr5 138543571 138543602 -64541930 + AT_rich Low_complexity Low_complexity 1 31 0 279 339 17 8 chr5 138550252 138550370 -64535162 - Charlie8 DNA MER1_type -2169 248 130 2174 132 44 34 chr5 138550395 138550450 -64535082 - MLT1B LTR MaLR 0 390 337 1852 140 62 25 chr5 138550450 138550772 -64534760 - MER1B DNA MER1_type 0 337 4 2174 132 44 34 chr5 138550772 138551102 -64534430 - MLT1B LTR MaLR -53 337 1 685 273 64 0 chr5 138551163 138551350 -64534182 - MIR SINE MIR -21 241 43 240 258 15 15 chr5 138552069 138552135 -64533397 + CT-rich Low_complexity Low_complexity 1 66 0 26 0 0 0 chr5 138554218 138554244 -64531288 + AT_rich Low_complexity Low_complexity 1 26 0 2917 3 0 0 chr5 138554280 138554593 -64530939 + AluYb8 SINE Alu 1 313 -5 189 0 0 0 chr5 138555131 138555152 -64530380 + (T)n Simple_repeat Simple_repeat 1 21 0 624 201 0 18 chr5 138555313 138555540 -64529992 + (TA)n Simple_repeat Simple_repeat 1 222 0 1508 87 0 0 chr5 138555544 138555728 -64529804 - AluSc SINE Alu -125 184 1 1435 124 32 130 chr5 138557834 138558172 -64527360 + MER1B DNA MER1_type 35 339 0 385 217 163 40 chr5 138560523 138560697 -64524835 + MIR SINE MIR 13 196 -66 251 297 176 27 chr5 138560780 138560928 -64524604 - L2 LINE L2 -120 3193 3024 434 307 212 0 chr5 138561078 138561257 -64524275 + MIR SINE MIR 45 261 -1 223 256 0 0 chr5 138561473 138561516 -64524016 + MIR SINE MIR 219 261 -1 479 258 116 37 chr5 138562004 138562194 -64523338 - L2 LINE L2 0 3313 3109 1150 193 117 0 chr5 138562223 138562497 -64523035 - L2 LINE L2 -543 2771 2466 384 321 30 8 chr5 138562505 138562636 -64522896 - MER63A DNA MER1_type -6 204 71 180 0 0 0 chr5 138562639 138562659 -64522873 + (TC)n Simple_repeat Simple_repeat 2 21 0 12160 147 20 3 chr5 138562693 138564669 -64520863 + Tigger2 DNA MER2_type 2 2010 -708 28 29 0 0 chr5 138565661 138565696 -64519836 + AT_rich Low_complexity Low_complexity 1 35 0 5890 34 11 0 chr5 138565696 138566401 -64519131 - L1PA4 LINE L1 -3 6152 5440 481 279 214 0 chr5 138566494 138566709 -64518823 + MIR SINE MIR 2 262 0 204 241 103 58 chr5 138567483 138567570 -64517962 + L2 LINE L2 2887 2977 -295 2028 104 36 128 chr5 138568912 138569325 -64516207 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 138569895 138569918 -64515614 + AT_rich Low_complexity Low_complexity 1 23 0 1541 251 66 60 chr5 138570409 138570830 -64514702 - MLT1F LTR MaLR -33 509 83 2531 143 39 2 chr5 138570830 138571243 -64514289 - MSTA LTR MaLR 0 428 1 1541 251 66 60 chr5 138571243 138571318 -64514214 - MLT1F LTR MaLR -459 83 10 340 299 43 122 chr5 138571327 138571788 -64513744 - MLT1F-int LTR MaLR 0 1371 947 358 247 0 43 chr5 138571893 138571986 -64513546 - MLT1F-int LTR MaLR -496 875 787 359 264 91 0 chr5 138572257 138572367 -64513165 - MLT1F-int LTR MaLR -769 602 483 365 235 26 17 chr5 138572544 138572659 -64512873 - MLT1F-int LTR MaLR -1226 145 30 1482 256 48 54 chr5 138572659 138573175 -64512357 - MLT1F LTR MaLR -1 541 29 625 268 86 88 chr5 138573200 138573584 -64511948 + L2 LINE L2 2930 3312 -1 2626 210 36 5 chr5 138574903 138575546 -64509986 - L1M3de LINE L1 -4516 1945 1259 11203 128 109 9 chr5 138575859 138577757 -64507775 + L1PB1 LINE L1 1 2088 -4775 8845 201 79 37 chr5 138577745 138579777 -64505755 + L1PB1 LINE L1 3122 5497 -1370 * 678 145 8 24 chr5 138579777 138579901 -64505631 + THE1C LTR MaLR 5 126 -249 8845 201 79 37 chr5 138579901 138581332 -64504200 + L1PB1 LINE L1 5497 6866 -1 31 0 0 0 chr5 138581621 138581652 -64503880 + AT_rich Low_complexity Low_complexity 1 31 0 1458 85 0 0 chr5 138581652 138581852 -64503680 - L1MA1 LINE L1 -6 6296 6097 1381 251 79 28 chr5 138581854 138582383 -64503149 + L1ME3A LINE L1 5566 6121 -49 22 0 0 0 chr5 138583512 138583534 -64501998 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 138586202 138586225 -64499307 + AT_rich Low_complexity Low_complexity 1 23 0 2737 20 0 0 chr5 138587139 138587445 -64498087 + AluYa5 SINE Alu 1 306 -5 181 338 224 14 chr5 138588629 138588987 -64496545 + L2 LINE L2 1792 2224 -1090 445 260 0 83 chr5 138589076 138589257 -64496275 + L1MC5 LINE L1 6637 6802 -1159 366 164 0 0 chr5 138589271 138589338 -64496194 + L1MC5 LINE L1 7173 7239 -722 1918 185 15 6 chr5 138589428 138589763 -64495769 + Tigger7 DNA MER2_type 1 338 -212 784 209 0 7 chr5 138589767 138589915 -64495617 + Tigger7 DNA MER2_type 2345 2491 0 953 223 54 81 chr5 138589915 138590448 -64495084 + L1MC5 LINE L1 7343 7861 -100 292 324 61 20 chr5 138590505 138590653 -64494879 + L2 LINE L2 2217 2370 -944 6073 88 18 10 chr5 138590700 138591557 -64493975 - L1PA8A LINE L1 -36 6095 5246 2415 96 38 3 chr5 138591557 138591900 -64493632 + THE1A LTR MaLR 1 355 0 10928 97 22 10 chr5 138591900 138593461 -64492071 + THE1A-int LTR MaLR 1 1580 0 2314 99 41 12 chr5 138593461 138593806 -64491726 + THE1A LTR MaLR 1 355 0 6073 88 18 10 chr5 138593806 138594170 -64491362 - L1PA8A LINE L1 -884 5247 4868 774 311 165 15 chr5 138594174 138594694 -64490838 + L2 LINE L2 2376 2973 -341 347 306 100 22 chr5 138594776 138594956 -64490576 + L2 LINE L2 3115 3308 -5 577 277 71 0 chr5 138595848 138596003 -64489529 + MER5B DNA MER1_type 1 166 -12 394 354 57 6 chr5 138596668 138596826 -64488706 + L2 LINE L2 3107 3272 0 390 283 106 31 chr5 138597258 138597484 -64488048 + L1ME4a LINE L1 5765 6007 -114 2019 121 7 3 chr5 138597586 138597876 -64487656 + AluSx SINE Alu 6 296 -16 22 0 0 0 chr5 138598097 138598119 -64487413 + AT_rich Low_complexity Low_complexity 1 22 0 279 0 0 0 chr5 138598258 138598289 -64487243 + (CA)n Simple_repeat Simple_repeat 2 32 0 372 373 20 13 chr5 138598811 138598964 -64486568 + L2 LINE L2 3119 3272 0 278 305 37 5 chr5 138599446 138599633 -64485899 + L1ME3A LINE L1 5176 5368 -778 1980 263 43 13 chr5 138599674 138600329 -64485203 + L1ME3A LINE L1 5456 6165 -5 249 299 144 21 chr5 138601056 138601153 -64484379 - L2 LINE L2 -5 3308 3200 594 320 35 0 chr5 138603472 138603669 -64481863 + MIR SINE MIR 49 252 -10 332 298 158 58 chr5 138604401 138604794 -64480738 + LTR33A LTR ERVL 37 468 -55 357 197 0 0 chr5 138606264 138606340 -64479192 + MER53 DNA DNA 100 175 -14 289 261 0 11 chr5 138606265 138606353 -64479179 - MER53 DNA DNA -90 99 13 * 186 349 0 0 chr5 138606638 138606701 -64478831 - L2 LINE L2 0 3272 3210 280 264 42 0 chr5 138606728 138606800 -64478732 + L2 LINE L2 2753 2827 -487 630 305 55 61 chr5 138606824 138607168 -64478364 + L2 LINE L2 2972 3313 0 205 306 166 26 chr5 138607536 138607729 -64477803 - MIR SINE MIR -3 259 40 869 170 12 115 chr5 138608058 138608311 -64477221 - MER106A DNA MER1_type 0 236 10 480 315 40 0 chr5 138608391 138608540 -64476992 + MIR3 SINE MIR 23 177 -31 38 0 0 0 chr5 138609329 138609367 -64476165 + AT_rich Low_complexity Low_complexity 1 38 0 322 366 28 0 chr5 138610613 138610755 -64474777 + L3 LINE CR1 1294 1439 -138 2327 106 0 0 chr5 138612905 138613208 -64472324 - AluSq SINE Alu -10 303 1 1696 151 11 15 chr5 138613262 138613527 -64472005 - MER1B DNA MER1_type 0 339 76 548 213 20 20 chr5 138614004 138614154 -64471378 + L1MB7 LINE L1 6035 6184 0 2177 102 0 3 chr5 138617404 138617719 -64467813 + AluSg SINE Alu 1 314 0 323 232 56 56 chr5 138617732 138617857 -64467675 - L2 LINE L2 -9 3304 3180 390 310 47 18 chr5 138618846 138619017 -64466515 - MIR SINE MIR -14 248 73 5974 40 10 1 chr5 138622547 138623279 -64462253 + L1PA5 LINE L1 5409 6146 -8 331 302 19 19 chr5 138624240 138624256 -64461276 - L1MA10 LINE L1 0 6334 6319 4107 235 69 33 chr5 138624256 138626601 -64458931 - L1ME1 LINE L1 -6 6160 3734 385 311 13 107 chr5 138627798 138628023 -64457509 + LTR16B LTR ERVL 1 204 -260 296 296 11 0 chr5 138628027 138628115 -64457417 + HERV16 LTR ERVL 2700 2788 -2208 763 276 52 66 chr5 138628496 138628858 -64456674 - MLT1J LTR MaLR -1 510 154 669 295 113 52 chr5 138629150 138629668 -64455864 + L1MC/D LINE L1 3660 4145 -2001 1607 122 88 0 chr5 138629668 138629931 -64455601 + L1PB3 LINE L1 5869 6154 0 669 295 113 52 chr5 138629931 138630936 -64454596 + L1MC/D LINE L1 4145 5277 -869 471 276 71 71 chr5 138630949 138631286 -64454246 + L1MC/D LINE L1 5317 5653 -2155 2242 122 23 16 chr5 138631392 138631778 -64453754 + MLT1B LTR MaLR 1 389 -1 244 267 42 25 chr5 138632235 138632355 -64453177 + L1MC4 LINE L1 7920 8041 -1 746 298 33 63 chr5 138633585 138634125 -64451407 - L2 LINE L2 -639 2675 2152 244 351 94 12 chr5 138636578 138636749 -64448783 - MER5A DNA MER1_type -2 187 3 605 280 202 5 chr5 138638962 138639180 -64446352 + MIR SINE MIR 1 261 -1 1062 206 20 57 chr5 138640835 138641083 -64444449 + Tigger7 DNA MER2_type 1 239 -494 580 182 0 10 chr5 138641096 138641195 -64444337 + Tigger7 DNA MER2_type 2390 2487 0 2978 55 3 0 chr5 138641512 138641892 -64443640 - L1PA8 LINE L1 -4 6168 5788 2171 119 76 15 chr5 138642088 138642431 -64443101 - THE1B LTR MaLR 0 364 1 198 0 0 0 chr5 138642714 138642736 -64442796 + (TG)n Simple_repeat Simple_repeat 1 22 0 318 67 0 0 chr5 138642736 138642781 -64442751 + (GA)n Simple_repeat Simple_repeat 2 46 0 317 278 71 33 chr5 138643410 138643622 -64441910 - HAL1b LINE L1 -1 1347 1128 2091 263 78 43 chr5 138643631 138644499 -64441033 - L1ME1 LINE L1 -3 6163 5244 377 91 432 0 chr5 138644499 138644587 -64440945 + FLAM_C SINE Alu 1 126 -7 2091 263 78 43 chr5 138644587 138644852 -64440680 - L1ME1 LINE L1 -922 5244 4990 309 274 177 43 chr5 138645766 138645952 -64439580 - L1MC4 LINE L1 -136 7906 7696 244 276 41 20 chr5 138646084 138646182 -64439350 - L1MC5 LINE L1 -589 7372 7273 1829 298 59 20 chr5 138646294 138647270 -64438262 - L1MC5 LINE L1 -747 5399 4881 561 194 11 28 chr5 138647318 138647498 -64438034 + CT-rich Low_complexity Low_complexity 3 179 0 2636 129 15 35 chr5 138648775 138649231 -64436301 + L1MA4 LINE L1 5833 6279 -21 1383 146 5 0 chr5 138649231 138649436 -64436096 + AluSx SINE Alu 1 206 -106 5208 101 13 1 chr5 138649436 138650190 -64435342 + L1PA14 LINE L1 5398 6160 -1 24 0 0 0 chr5 138650324 138650348 -64435184 + AT_rich Low_complexity Low_complexity 1 24 0 195 42 0 0 chr5 138651359 138651383 -64434149 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1433 239 173 22 chr5 138651570 138652159 -64433373 - L1ME3A LINE L1 -8 6162 5485 2880 239 55 55 chr5 138652232 138654302 -64431230 - L1ME2 LINE L1 -2 6231 4159 857 196 20 0 chr5 138654302 138654455 -64431077 + MSTD LTR MaLR 230 385 -11 2591 155 37 33 chr5 138654464 138654955 -64430577 - Tigger5 DNA MER2_type 0 2323 1831 330 235 56 34 chr5 138655060 138655239 -64430293 - L1ME2 LINE L1 -5106 1099 917 1631 164 10 33 chr5 138655331 138655636 -64429896 - THE1A LTR MaLR -5 350 53 700 261 72 13 chr5 138655637 138655930 -64429602 - L1ME3A LINE L1 -2003 4143 3817 320 240 60 10 chr5 138656075 138656175 -64429357 - L1ME2 LINE L1 -5501 895 791 1425 207 9 47 chr5 138659841 138660160 -64425372 - MER58B DNA MER1_type -22 319 13 648 301 120 29 chr5 138660987 138661612 -64423920 + HAL1b LINE L1 249 930 -418 562 221 23 0 chr5 138661616 138661747 -64423785 + HAL1 LINE L1 1637 1770 -737 417 351 6 12 chr5 138661791 138661959 -64423573 + LTR67 LTR ERVL 47 213 -344 262 211 0 0 chr5 138662723 138662780 -64422752 + (TG)n Simple_repeat Simple_repeat 2 58 0 447 268 121 6 chr5 138664579 138664736 -64420796 + L2 LINE L2 1784 1958 -1356 191 333 61 0 chr5 138664739 138664805 -64420727 + L2 LINE L2 2632 2701 -613 237 229 28 125 chr5 138664928 138665072 -64420460 - L1MC5 LINE L1 -60 7901 7772 1218 245 193 6 chr5 138665083 138665650 -64419882 - L1ME2 LINE L1 -11 6153 5484 3533 234 73 49 chr5 138665656 138667208 -64418324 - L1ME1 LINE L1 0 6235 4721 11013 104 10 3 chr5 138667208 138669646 -64415886 + L1PA8 LINE L1 3740 6172 0 3533 234 73 49 chr5 138669646 138670038 -64415494 - L1ME1 LINE L1 -1514 4721 4340 189 0 0 0 chr5 138670038 138670059 -64415473 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3533 234 73 49 chr5 138670059 138670301 -64415231 - L1ME1 LINE L1 -1895 4340 4105 2117 116 0 13 chr5 138670301 138670602 -64414930 + AluSq SINE Alu 3 299 -14 3533 234 73 49 chr5 138670602 138670736 -64414796 - L1ME1 LINE L1 -2130 4105 3863 1567 187 63 8 chr5 138670750 138671114 -64414418 - L1MA9 LINE L1 -37 6275 5892 3193 244 62 6 chr5 138671118 138672098 -64413434 + L1 LINE L1 2390 3424 -2722 3621 192 36 79 chr5 138672116 138673012 -64412520 - MER21B LTR ERV1 -6 857 1 2589 185 44 23 chr5 138673013 138673586 -64411946 + L1 LINE L1 3421 4005 -2141 247 288 102 23 chr5 138673585 138673762 -64411770 - L1ME1 LINE L1 -2367 3848 3658 * 1188 162 15 15 chr5 138673764 138673968 -64411564 + AluJo SINE Alu 1 204 -108 1833 247 114 18 chr5 138674000 138675025 -64410507 - L1ME1 LINE L1 -2959 3256 2157 343 249 101 0 chr5 138675041 138675210 -64410322 - L1MEc LINE L1 -4011 2814 2629 1709 194 135 34 chr5 138675212 138675685 -64409847 - L1MEc LINE L1 -5385 1157 637 1331 234 92 49 chr5 138675685 138676176 -64409356 - LTR53 LTR ERVL -7 512 1 1434 272 72 49 chr5 138676187 138676800 -64408732 - L1MEc LINE L1 -5901 641 15 542 301 87 3 chr5 138676910 138677199 -64408333 + L1MDa LINE L1 1664 1976 -4564 3530 227 56 24 chr5 138677262 138679299 -64406233 - L1MD1 LINE L1 0 6502 4408 868 256 46 3 chr5 138679308 138679593 -64405939 - L1MD1 LINE L1 -2075 4331 4035 1271 208 75 23 chr5 138679618 138680028 -64405504 - MER39 LTR ERV1 0 665 223 307 278 0 0 chr5 138680141 138680213 -64405319 - Tigger5 DNA MER2_type 0 2323 2252 249 172 0 182 chr5 138680193 138680292 -64405240 + Tigger5 DNA MER2_type 2240 2320 -3 * 428 213 0 12 chr5 138680292 138680371 -64405161 - Tigger5 DNA MER2_type -2245 78 1 2481 226 46 23 chr5 138680373 138681155 -64404377 - L1MD1 LINE L1 -2402 4004 3205 414 262 109 15 chr5 138681168 138681370 -64404162 + L1MDa LINE L1 2241 2461 -4079 305 169 91 0 chr5 138681366 138681443 -64404089 - L1MD1 LINE L1 -3215 3191 3108 * 2745 217 102 60 chr5 138681452 138682909 -64402623 - L1MD1 LINE L1 -3805 2601 1100 1232 192 63 42 chr5 138682909 138683195 -64402337 - MLT1D LTR MaLR -207 298 7 643 223 0 0 chr5 138683196 138683317 -64402215 - L1MD1 LINE L1 -6279 130 10 643 348 114 34 chr5 138683333 138683922 -64401610 - L3 LINE CR1 -863 714 79 225 289 66 13 chr5 138684099 138684175 -64401357 - L2 LINE L2 0 3272 3193 306 50 0 0 chr5 138685196 138685236 -64400296 + (TG)n Simple_repeat Simple_repeat 2 41 0 466 259 15 102 chr5 138685663 138685706 -64399826 - MER5A DNA MER1_type -1 188 143 2202 85 20 3 chr5 138685706 138686012 -64399520 + AluY SINE Alu 1 311 0 466 259 15 102 chr5 138686012 138686173 -64399359 - MER5A DNA MER1_type -46 143 2 260 244 30 104 chr5 138687043 138687178 -64398354 - MER94 DNA DNA -9 125 1 714 293 109 34 chr5 138687375 138687416 -64398116 + L2 LINE L2 2709 2746 -567 707 243 55 11 chr5 138687416 138687597 -64397935 - MER5A DNA MER1_type 0 189 1 714 293 109 34 chr5 138687597 138688117 -64397415 + L2 LINE L2 2746 3313 0 222 239 60 60 chr5 138689878 138689945 -64395587 + L2 LINE L2 3246 3312 -1 950 127 41 0 chr5 138690457 138690698 -64394834 + L1PB1 LINE L1 5829 6146 -5 29 0 0 0 chr5 138690698 138690727 -64394805 + AT_rich Low_complexity Low_complexity 1 29 0 695 299 47 5 chr5 138691600 138691814 -64393718 - MIR SINE MIR -32 230 8 2006 191 35 65 chr5 138691838 138692105 -64393427 - MLT1D LTR MaLR -2 503 258 2329 116 0 0 chr5 138692105 138692407 -64393125 + AluSx SINE Alu 1 302 -10 2006 191 35 65 chr5 138692407 138692658 -64392874 - MLT1D LTR MaLR -247 258 1 228 227 0 0 chr5 138693512 138693556 -64391976 + (CA)n Simple_repeat Simple_repeat 2 45 0 204 357 75 67 chr5 138694724 138695111 -64390421 - L2 LINE L2 -17 3255 2866 28 48 0 0 chr5 138695185 138695227 -64390305 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 138696582 138696604 -64388928 + AT_rich Low_complexity Low_complexity 1 22 0 2026 84 8 4 chr5 138697989 138698251 -64387281 - AluSq SINE Alu -50 263 1 551 295 116 14 chr5 138698521 138698728 -64386804 + MIR SINE MIR 31 258 -4 503 194 10 0 chr5 138699898 138699996 -64385536 + Ricksha DNA DNA 1 99 -3147 300 106 0 0 chr5 138700012 138700059 -64385473 + Ricksha DNA DNA 239 285 -1761 * 4287 160 18 38 chr5 138700058 138701038 -64384494 + Ricksha DNA DNA 1690 2687 -559 2281 98 0 0 chr5 138701038 138701333 -64384199 + AluY SINE Alu 1 295 -16 4287 160 18 38 chr5 138701333 138701649 -64383883 + Ricksha DNA DNA 2687 2919 -327 2277 112 0 0 chr5 138701649 138701945 -64383587 - AluSx SINE Alu -16 296 1 4287 160 18 38 chr5 138701945 138702259 -64383273 + Ricksha DNA DNA 2919 3238 -8 3213 115 2 0 chr5 138702723 138703193 -64382339 + L1PA4 LINE L1 11 481 -5665 * 22312 44 4 1 chr5 138703188 138706132 -64379400 + L1PA4 LINE L1 2237 5188 -958 1461 55 5 5 chr5 138706112 138706312 -64379220 + L1HS LINE L1 5956 6155 0 * 28 29 0 0 chr5 138706312 138706347 -64379185 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr5 138706417 138706440 -64379092 + (A)n Simple_repeat Simple_repeat 1 23 0 7283 39 6 1 chr5 138706440 138707417 -64378115 + L1PA4 LINE L1 5175 6155 0 400 81 16 0 chr5 138707431 138707493 -64378039 + Ricksha DNA DNA 2688 2750 -496 190 264 19 19 chr5 138707519 138707572 -64377960 + L2 LINE L2 3214 3266 -6 190 308 15 15 chr5 138707595 138707660 -64377872 + MIR SINE MIR 28 92 -170 24 0 0 0 chr5 138711287 138711311 -64374221 + AT_rich Low_complexity Low_complexity 1 24 0 230 254 15 45 chr5 138714335 138714402 -64371130 - L2 LINE L2 -14 3299 3235 277 311 94 80 chr5 138714609 138714704 -64370828 + MIR SINE MIR 48 140 -122 1571 188 22 0 chr5 138714704 138715029 -64370503 - AluJb SINE Alu 0 331 1 277 311 94 80 chr5 138715029 138715144 -64370388 + MIR SINE MIR 140 262 0 3135 128 6 0 chr5 138715214 138715689 -64369843 + MER1A DNA MER1_type 52 529 0 233 260 0 0 chr5 138715708 138715758 -64369774 - L2 LINE L2 -8 3305 3256 564 284 151 0 chr5 138715812 138716030 -64369502 + MIR SINE MIR 2 252 -10 308 257 14 0 chr5 138716202 138716276 -64369256 - MIR SINE MIR 0 262 188 210 250 18 0 chr5 138719173 138719229 -64366303 + GA-rich Low_complexity Low_complexity 2 58 0 3938 177 58 19 chr5 138720603 138721398 -64364134 + LTR1B LTR ERV1 1 826 0 1491 201 50 47 chr5 138721522 138721886 -64363646 + MLT1A1 LTR MaLR 1 365 0 2317 103 13 46 chr5 138721896 138722284 -64363248 - THE1C LTR MaLR 0 375 1 462 273 12 24 chr5 138722522 138722687 -64362845 - HERVL LTR ERVL -384 5380 5218 608 339 54 9 chr5 138722780 138723096 -64362436 - HERVL LTR ERVL -695 5069 4740 27 0 0 0 chr5 138723236 138723263 -64362269 + AT_rich Low_complexity Low_complexity 1 27 0 265 336 66 40 chr5 138723399 138723747 -64361785 - HERVL LTR ERVL -1387 4267 3911 2284 133 25 17 chr5 138724014 138724375 -64361157 - THE1B LTR MaLR 0 364 1 602 0 27 0 chr5 138724510 138724583 -64360949 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 500 314 44 16 chr5 138724668 138724916 -64360616 - HERVL LTR ERVL -2333 3431 3177 328 361 5 25 chr5 138725000 138725202 -64360330 - HERVL LTR ERVL -2657 2997 2800 523 274 13 0 chr5 138725422 138725575 -64359957 - HERVL LTR ERVL -3250 2514 2360 23 0 0 0 chr5 138727212 138727235 -64358297 + AT_rich Low_complexity Low_complexity 1 23 0 266 290 81 28 chr5 138727476 138728024 -64357508 + L1M4 LINE L1 5150 5775 -403 784 312 74 45 chr5 138728675 138729159 -64356373 - L2 LINE L2 -4 3309 2812 225 0 0 0 chr5 138729633 138729658 -64355874 + (T)n Simple_repeat Simple_repeat 1 25 0 519 222 0 0 chr5 138730960 138731059 -64354473 + AluJ/FLAM SINE Alu 1 99 -213 1390 131 0 0 chr5 138731060 138731274 -64354258 + MER4B LTR ERV1 397 610 0 405 259 30 52 chr5 138731670 138731805 -64353727 + MIR SINE MIR 2 133 -129 197 163 20 0 chr5 138731895 138731944 -64353588 + CT-rich Low_complexity Low_complexity 4 53 0 812 341 45 29 chr5 138732166 138732896 -64352636 - HERVL LTR ERVL -2579 3075 2334 330 242 73 24 chr5 138732908 138733032 -64352500 - MER3 DNA MER1_type 0 209 80 1472 303 57 34 chr5 138733056 138733123 -64352409 - HERVL LTR ERVL -2668 2328 2264 750 237 0 30 chr5 138733123 138733292 -64352240 - FRAM SINE Alu -2 164 1 1472 303 57 34 chr5 138733292 138733931 -64351601 - HERVL LTR ERVL -2732 2264 1606 2046 144 37 55 chr5 138734233 138734670 -64350862 - Tigger2a DNA MER2_type 0 434 6 758 283 45 25 chr5 138734671 138734957 -64350575 - HERVL LTR ERVL -3817 1179 888 507 316 26 5 chr5 138735205 138735398 -64350134 + LTR16A LTR ERVL 240 436 -14 188 330 121 0 chr5 138736764 138736855 -64348677 - L2 LINE L2 -2 3270 3169 586 73 0 0 chr5 138736873 138736955 -64348577 + L1PA8 LINE L1 6090 6171 -1 1053 214 23 9 chr5 138737045 138737265 -64348267 + MER58A DNA MER1_type 2 224 0 249 33 0 0 chr5 138737459 138737489 -64348043 + (CA)n Simple_repeat Simple_repeat 1 30 0 5918 121 86 69 chr5 138737620 138737754 -64347778 - Tigger3b DNA MER2_type -1797 1231 1101 2116 154 9 3 chr5 138737754 138738086 -64347446 + MER1B DNA MER1_type 4 337 0 5918 121 86 69 chr5 138738086 138739161 -64346371 - Tigger3b DNA MER2_type -1927 1101 2 1084 194 15 113 chr5 138740463 138740578 -64344954 + MLT2B3 LTR ERVL 1 126 -428 2291 168 18 63 chr5 138740578 138741085 -64344447 + MER66B LTR ERV1 1 484 -2 1084 194 15 113 chr5 138741085 138741298 -64344234 + MLT2B3 LTR ERVL 126 297 -257 752 224 82 34 chr5 138742296 138742594 -64342938 + MER77 LTR ERV1 3 355 -250 22 35 0 0 chr5 138743069 138743098 -64342434 + AT_rich Low_complexity Low_complexity 1 29 0 459 169 0 0 chr5 138743233 138743310 -64342222 - MLT1E2 LTR MaLR 0 626 550 948 175 6 0 chr5 138743314 138743480 -64342052 - FRAM SINE Alu -7 169 3 237 33 0 0 chr5 138743480 138743510 -64342022 + (TA)n Simple_repeat Simple_repeat 2 31 0 1797 129 83 0 chr5 138743510 138743788 -64341744 - AluSx SINE Alu -11 301 1 1844 240 59 45 chr5 138743789 138744351 -64341181 - MLT1E2 LTR MaLR -56 570 1 351 282 61 44 chr5 138744369 138744550 -64340982 - MLT1K LTR MaLR -83 505 322 387 163 0 0 chr5 138744918 138744998 -64340534 + (TA)n Simple_repeat Simple_repeat 2 81 0 561 334 149 15 chr5 138745070 138745612 -64339920 - MLT1L LTR MaLR 0 615 1 203 273 18 0 chr5 138746167 138746222 -64339310 + L2 LINE L2 3225 3280 -33 300 111 0 0 chr5 138746224 138746269 -64339263 + (TG)n Simple_repeat Simple_repeat 2 46 0 777 173 23 0 chr5 138746282 138746455 -64339077 + GA-rich Low_complexity Low_complexity 2 178 0 247 255 64 32 chr5 138748880 138748974 -64336558 - MARNA DNA Mariner -327 259 163 255 112 69 43 chr5 138749329 138749445 -64336087 + (TA)n Simple_repeat Simple_repeat 2 120 0 409 128 39 44 chr5 138749456 138749636 -64335896 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 248 40 101 30 chr5 138749776 138749875 -64335657 + (TA)n Simple_repeat Simple_repeat 1 106 0 9761 27 3 0 chr5 138749986 138751144 -64334388 - L1PA2 LINE L1 -1080 5066 3906 7580 26 0 3 chr5 138751144 138752232 -64333300 + L1PA2 LINE L1 5071 6155 0 542 248 96 6 chr5 138752397 138752554 -64332978 - MIR SINE MIR -5 257 87 294 256 57 161 chr5 138753293 138753504 -64332028 - MIR SINE MIR -11 251 63 852 297 20 36 chr5 138754280 138754583 -64330949 + MLT1I LTR MaLR 106 403 -6 353 281 96 27 chr5 138754873 138755019 -64330513 - L2 LINE L2 0 3313 3158 300 371 81 30 chr5 138755145 138755479 -64330053 - L2 LINE L2 -338 2976 2626 2096 210 30 9 chr5 138755538 138756186 -64329346 - L1M4 LINE L1 -614 5564 4903 2135 66 0 0 chr5 138756246 138756503 -64329029 + AluY SINE Alu 42 298 -13 1472 248 78 11 chr5 138756606 138757244 -64328288 + L1M4b LINE L1 945 1611 -4773 * 4456 50 5 2 chr5 138757242 138757807 -64327725 - L1PA5 LINE L1 -2165 3981 3415 * 8792 47 4 1 chr5 138757806 138758899 -64326633 + L1PA5 LINE L1 4000 5095 -1051 7209 52 0 2 chr5 138759001 138759897 -64325635 + L1PA5 LINE L1 5254 6147 -7 777 271 50 53 chr5 138759918 138760423 -64325109 + L1M4b LINE L1 1743 2245 -4318 * 2120 238 63 31 chr5 138760418 138761264 -64324268 + L1M4b LINE L1 2473 3345 -3037 256 310 49 59 chr5 138761991 138762194 -64323338 + HAL1 LINE L1 2301 2501 -6 185 281 292 0 chr5 138762384 138762473 -64323059 - MIR SINE MIR -59 149 35 13186 31 0 0 chr5 138763709 138765301 -64320231 - L1P LINE L1 -1812 4334 2743 3142 32 0 0 chr5 138765301 138765723 -64319809 + L1PA3 LINE L1 5784 6206 0 22 70 0 0 chr5 138765727 138765770 -64319762 + AT_rich Low_complexity Low_complexity 1 43 0 230 69 0 0 chr5 138765796 138765825 -64319707 + (A)n Simple_repeat Simple_repeat 1 29 0 253 253 0 77 chr5 138765996 138766087 -64319445 + MIR3 SINE MIR 120 203 -5 30 59 0 0 chr5 138766428 138766479 -64319053 + AT_rich Low_complexity Low_complexity 1 51 0 294 266 23 0 chr5 138766532 138766660 -64318872 + GA-rich Low_complexity Low_complexity 3 133 0 5755 180 48 20 chr5 138767715 138769170 -64316362 + L1MC1 LINE L1 4848 6333 0 3795 125 7 8 chr5 138769225 138769826 -64315706 - L1PA14 LINE L1 -1 6160 5561 396 337 0 0 chr5 138770515 138770616 -64314916 + HERVL LTR ERVL 1506 1606 -4158 561 327 52 52 chr5 138770783 138771018 -64314514 + HERVL LTR ERVL 1748 1858 -3138 7887 9 3 0 chr5 138771018 138772111 -64313421 + L1PA2 LINE L1 5060 6155 0 561 327 52 52 chr5 138772111 138772224 -64313308 + HERVL LTR ERVL 1857 1969 -3027 1702 171 4 4 chr5 138772644 138772925 -64312607 + AluJb SINE Alu 1 281 -31 906 336 39 45 chr5 138772951 138773599 -64311933 + HERVL LTR ERVL 2714 3374 -2390 2014 205 49 27 chr5 138773620 138774149 -64311383 - MER34 LTR ERV1 -2 540 11 420 302 114 31 chr5 138774347 138774602 -64310930 + HERVL LTR ERVL 3678 3953 -1811 540 319 118 24 chr5 138774894 138775262 -64310270 + HERVL LTR ERVL 4046 4485 -1241 2752 122 18 14 chr5 138775264 138775298 -64310234 - MLT2A1 LTR ERVL 0 444 412 209 33 33 0 chr5 138775298 138775328 -64310204 + (TA)n Simple_repeat Simple_repeat 2 32 0 2752 122 18 14 chr5 138775328 138775735 -64309797 - MLT2A1 LTR ERVL -32 412 1 272 333 10 10 chr5 138775804 138775903 -64309629 + L2 LINE L2 3169 3267 -5 2280 97 0 7 chr5 138776038 138776337 -64309195 + AluSg SINE Alu 1 297 -13 529 334 131 28 chr5 138777247 138777645 -64307887 + L2 LINE L2 977 1415 -1899 311 246 63 76 chr5 138777837 138777981 -64307551 + L1ME4a LINE L1 5616 5760 -361 1548 124 12 0 chr5 138777981 138778230 -64307302 + L1MA5A LINE L1 6046 6297 0 311 246 63 76 chr5 138778230 138778402 -64307130 + L1ME4a LINE L1 5760 5928 -193 21 36 0 0 chr5 138778569 138778597 -64306935 + AT_rich Low_complexity Low_complexity 1 28 0 470 346 42 24 chr5 138778833 138779122 -64306410 + L2 LINE L2 1823 2116 -1198 327 319 146 9 chr5 138779165 138779390 -64306142 + MIR SINE MIR 5 262 0 404 327 91 35 chr5 138779427 138779855 -64305677 + L2 LINE L2 2204 2655 -659 305 298 18 100 chr5 138780290 138780569 -64304963 + HAL1 LINE L1 26 281 -2226 6600 189 60 13 chr5 138780841 138782227 -64303305 + L1M4c LINE L1 18 1468 -4916 236 212 110 55 chr5 138782603 138782618 -64302914 - L1MA10 LINE L1 -2 6332 6318 1939 236 109 44 chr5 138782618 138783127 -64302405 - L1ME1 LINE L1 -5 6161 5687 231 114 0 0 chr5 138783127 138783162 -64302370 + (TG)n Simple_repeat Simple_repeat 2 36 0 1939 236 109 44 chr5 138783162 138783638 -64301894 - L1ME1 LINE L1 -479 5687 5110 10060 240 60 34 chr5 138783662 138786121 -64299411 + L1MA7 LINE L1 2 2397 -4335 2105 158 0 0 chr5 138786121 138786432 -64299100 + AluSx SINE Alu 1 311 -1 10060 240 60 34 chr5 138786432 138786837 -64298695 + L1MA7 LINE L1 2397 2201 -4531 265 89 0 0 chr5 138786837 138786882 -64298650 + Alu SINE Alu 257 301 0 10060 240 60 34 chr5 138786882 138787690 -64297842 + L1MA7 LINE L1 2200 2986 -3746 735 197 55 0 chr5 138787719 138787902 -64297630 + L1PB1 LINE L1 6 198 -6665 * 13549 165 42 13 chr5 138787898 138793585 -64291947 + L1PB1 LINE L1 995 6857 -10 278 212 15 0 chr5 138793597 138793663 -64291869 + L1MA7 LINE L1 3009 3075 -3657 5080 218 33 3 chr5 138793717 138794962 -64290570 + L1MA7 LINE L1 3059 4340 -2392 * 5445 170 35 34 chr5 138794959 138795240 -64290292 + L1MA7 LINE L1 4689 4968 -1909 2280 100 3 0 chr5 138795240 138795540 -64289992 + AluSc SINE Alu 1 301 -8 5445 170 35 34 chr5 138795540 138797006 -64288526 + L1MA7 LINE L1 4968 6445 -432 2498 59 0 3 chr5 138797006 138797310 -64288222 - AluY SINE Alu -5 306 4 5445 170 35 34 chr5 138797310 138797713 -64287819 + L1MA7 LINE L1 6445 6846 -31 418 324 46 11 chr5 138797888 138798172 -64287360 - L1MEc LINE L1 -4121 2275 1982 240 379 72 24 chr5 138798979 138799435 -64286097 - L2 LINE L2 -965 2349 1872 207 100 0 0 chr5 138801486 138801516 -64284016 + (CATA)n Simple_repeat Simple_repeat 1 30 0 25 65 0 0 chr5 138802223 138802269 -64283263 + AT_rich Low_complexity Low_complexity 1 46 0 198 372 124 0 chr5 138802653 138802766 -64282766 + MIR3 SINE MIR 37 163 -45 233 317 42 17 chr5 138803038 138803158 -64282374 + L1M4c LINE L1 1656 1778 -4606 23 0 0 0 chr5 138804702 138804725 -64280807 + AT_rich Low_complexity Low_complexity 1 23 0 5179 124 45 7 chr5 138806689 138808196 -64277336 - L1PA16 LINE L1 0 6166 4615 12195 92 6 13 chr5 138808442 138810162 -64275370 - HERVFH19I LTR ERV1 -3395 4324 2617 16402 117 40 3 chr5 138810163 138812533 -64272999 - HERVFH19I LTR ERV1 -5263 2456 1 2596 125 96 11 chr5 138812533 138812981 -64272551 - LTR19A LTR ERV1 0 486 1 505 252 25 0 chr5 138812981 138813100 -64272432 - MER63 DNA MER1_type -83 753 6 458 302 35 17 chr5 138813708 138813880 -64271652 + MIR SINE MIR 65 239 -23 1944 191 37 33 chr5 138814593 138814633 -64270899 - Charlie4a DNA MER1_type -1457 504 466 2012 191 74 25 chr5 138814633 138815078 -64270454 + MLT1C LTR MaLR 1 467 0 1944 191 37 33 chr5 138815078 138815274 -64270258 - Charlie4a DNA MER1_type -1495 466 272 2130 137 25 17 chr5 138815274 138815633 -64269899 - THE1B LTR MaLR 0 364 3 1944 191 37 33 chr5 138815633 138815878 -64269654 - Charlie4a DNA MER1_type -1689 272 20 811 172 147 32 chr5 138816991 138817302 -64268230 - MSTD LTR MaLR -1 395 3 1335 231 57 44 chr5 138818271 138818538 -64266994 + LTR16C LTR ERVL 79 354 -137 2408 102 13 31 chr5 138818538 138818920 -64266612 - THE1C LTR MaLR 0 375 1 1335 231 57 44 chr5 138818920 138819058 -64266474 + LTR16C LTR ERVL 354 489 -2 487 236 0 0 chr5 138820443 138820552 -64264980 - MLT1D LTR MaLR 0 505 397 984 203 29 109 chr5 138820552 138820902 -64264630 - MLT1A1 LTR MaLR 0 365 44 459 188 0 0 chr5 138821162 138821247 -64264285 + AluJ/FRAM SINE Alu 220 304 -8 1861 179 25 8 chr5 138821664 138822022 -64263510 - THE1B LTR MaLR 0 364 1 367 236 49 7 chr5 138822178 138822322 -64263210 + MLT1A1 LTR MaLR 1 150 -215 1838 105 11 7 chr5 138822823 138823100 -64262432 - L1MB1 LINE L1 -323 5866 5589 2785 229 54 22 chr5 138823961 138824958 -64260574 + L1MB8 LINE L1 5135 6154 -24 231 139 0 0 chr5 138825170 138825206 -64260326 + Alu SINE Alu 179 214 -89 2292 103 0 3 chr5 138825517 138825829 -64259703 - AluY SINE Alu 0 311 1 4285 94 14 52 chr5 138825942 138826630 -64258902 - L1PA10 LINE L1 -10 6158 5497 1045 251 19 12 chr5 138827985 138828244 -64257288 + MLT1E LTR MaLR 333 593 0 198 336 16 39 chr5 138828346 138828474 -64257058 + MIR SINE MIR 33 157 -105 1137 231 65 52 chr5 138828476 138828844 -64256688 - MLT1B LTR MaLR -2 388 16 3932 46 8 0 chr5 138829616 138830114 -64255418 - L1P LINE L1 -1392 4754 4253 2130 120 3 0 chr5 138830624 138830915 -64254617 - AluSx SINE Alu -18 294 3 925 199 35 9 chr5 138831150 138831376 -64254156 + L1P LINE L1 2788 3019 -3127 2237 115 0 3 chr5 138831426 138831730 -64253802 - AluSq SINE Alu -10 303 1 22 70 0 0 chr5 138831757 138831800 -64253732 + AT_rich Low_complexity Low_complexity 1 43 0 3501 157 2 0 chr5 138831845 138832405 -64253127 + L1PA15 LINE L1 5605 6165 0 357 258 32 105 chr5 138832459 138832747 -64252785 + L1ME LINE L1 5258 5524 -642 306 302 29 52 chr5 138833050 138833222 -64252310 + MIR SINE MIR 79 246 -16 730 166 22 0 chr5 138833831 138833970 -64251562 - L1MB2 LINE L1 -52 6119 5978 1619 178 3 35 chr5 138834039 138834353 -64251179 - AluJo SINE Alu -7 305 2 25 31 0 0 chr5 138834489 138834521 -64251011 + AT_rich Low_complexity Low_complexity 1 32 0 1780 99 34 10 chr5 138834628 138834922 -64250610 - L1P5 LINE L1 -437 5717 5417 306 243 0 0 chr5 138834921 138834995 -64250537 - L1M4 LINE L1 -1763 4383 4310 * 258 300 70 53 chr5 138835338 138835565 -64249967 - L2 LINE L2 -1279 2035 1805 8993 48 29 4 chr5 138836168 138837455 -64248077 - L1P LINE L1 -2834 3312 1994 2254 97 0 3 chr5 138837986 138838295 -64247237 - AluY SINE Alu -3 308 1 21 0 0 0 chr5 138839016 138839037 -64246495 + AT_rich Low_complexity Low_complexity 1 21 0 342 333 0 8 chr5 138839349 138839466 -64246066 + ERVL LTR ERVL 2363 2478 -3286 530 229 86 0 chr5 138839466 138839606 -64245926 - Charlie1a DNA MER1_type -1286 169 18 9605 28 37 2 chr5 138840475 138842080 -64243452 + L1P1 LINE L1 4016 5679 -476 201 310 80 40 chr5 138842468 138842568 -64242964 + MIR SINE MIR 50 153 -109 4400 172 47 15 chr5 138843294 138844593 -64240939 + L1M3 LINE L1 4427 5768 -403 234 97 81 16 chr5 138844845 138844907 -64240625 + (TA)n Simple_repeat Simple_repeat 1 66 0 293 192 13 13 chr5 138846706 138846784 -64238748 - L1ME3A LINE L1 -4 6166 6089 313 238 212 26 chr5 138846785 138846936 -64238596 - L1ME3A LINE L1 -145 6025 5847 3253 138 12 28 chr5 138847038 138847261 -64238271 + L1PB3 LINE L1 5579 5804 -350 342 45 0 0 chr5 138847261 138847305 -64238227 + (CA)n Simple_repeat Simple_repeat 2 45 0 3253 138 12 28 chr5 138847305 138847660 -64237872 + L1PB3 LINE L1 5804 6148 -6 670 202 0 0 chr5 138847679 138847793 -64237739 - Tigger7 DNA MER2_type -590 115 2 2336 256 33 45 chr5 138848122 138849694 -64235838 - L1M1 LINE L1 -4746 2360 47 5025 149 3 6 chr5 138849823 138850850 -64234682 + L1MA3 LINE L1 5025 6049 -256 520 334 20 10 chr5 138850855 138851160 -64234372 + L1M4 LINE L1 3373 3680 -2466 830 211 90 75 chr5 138851422 138851744 -64233788 - MLT1D LTR MaLR -115 390 64 1851 171 7 0 chr5 138851797 138852107 -64233425 + AluSx SINE Alu 1 312 0 475 257 17 11 chr5 138852813 138852992 -64232540 + (TA)n Simple_repeat Simple_repeat 1 180 0 2202 104 7 0 chr5 138853484 138853791 -64231741 + AluSp SINE Alu 1 309 -4 308 277 144 20 chr5 138854577 138854974 -64230558 + L1MEc LINE L1 1004 1449 -4947 10524 59 19 6 chr5 138854978 138857147 -64228385 - L1PA7 LINE L1 0 6154 3957 360 303 31 31 chr5 138858525 138858687 -64226845 - MIR SINE MIR -70 192 31 26 0 0 0 chr5 138858762 138858788 -64226744 + AT_rich Low_complexity Low_complexity 1 26 0 181 288 50 62 chr5 138858801 138858881 -64226651 - MIR SINE MIR -111 151 73 3933 185 102 13 chr5 138859930 138860694 -64224838 + L1M4c LINE L1 1516 2440 -3942 965 251 75 36 chr5 138860694 138861025 -64224507 + MER2 DNA MER2_type 1 344 0 3933 185 102 13 chr5 138861025 138861514 -64224018 + L1M4c LINE L1 2440 2884 -3498 365 286 104 45 chr5 138861709 138861978 -64223554 + HAL1 LINE L1 738 1022 -1485 687 258 115 5 chr5 138862014 138862231 -64223301 + HAL1 LINE L1 1505 1745 -762 634 271 106 40 chr5 138862300 138862831 -64222701 + HAL1 LINE L1 1864 2429 -78 32 26 0 0 chr5 138862885 138862924 -64222608 + AT_rich Low_complexity Low_complexity 1 39 0 243 0 0 0 chr5 138863014 138863041 -64222491 + (TG)n Simple_repeat Simple_repeat 2 28 0 231 36 0 0 chr5 138863040 138863068 -64222464 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 1515 220 3 3 chr5 138863069 138863355 -64222177 - AluJo SINE Alu -22 290 5 2251 145 5 27 chr5 138863405 138863725 -64221807 + THE1B LTR MaLR 1 326 -38 2001 157 36 17 chr5 138863725 138864081 -64221451 + THE1B LTR MaLR 1 363 -1 11288 91 25 1 chr5 138864082 138865626 -64219906 + THE1B-int LTR MaLR 1 1580 0 1567 188 116 9 chr5 138865626 138865955 -64219577 + THE1B LTR MaLR 1 364 0 2251 145 5 27 chr5 138865955 138866003 -64219529 + THE1B LTR MaLR 324 364 0 1583 203 15 54 chr5 138866030 138866419 -64219113 - MLT1A2 LTR MaLR 0 374 1 345 361 25 0 chr5 138867659 138867778 -64217754 - L2 LINE L2 0 3272 3151 194 446 14 7 chr5 138868166 138868305 -64217227 - MIR3 SINE MIR -53 155 16 300 143 0 0 chr5 138868883 138868939 -64216593 + (CA)n Simple_repeat Simple_repeat 2 57 0 29 60 0 0 chr5 138870707 138870757 -64214775 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr5 138871832 138871854 -64213678 + AT_rich Low_complexity Low_complexity 1 22 0 574 242 21 100 chr5 138871872 138872062 -64213470 + MIR SINE MIR 78 252 -10 1295 200 41 13 chr5 138872088 138872405 -64213127 - MER33 DNA MER1_type -5 319 1 202 194 0 0 chr5 138872480 138872516 -64213016 + GA-rich Low_complexity Low_complexity 2 37 0 25 0 0 0 chr5 138873104 138873129 -64212403 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 138874381 138874420 -64211112 + AT_rich Low_complexity Low_complexity 1 39 0 240 226 0 0 chr5 138874714 138874776 -64210756 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 52 58 0 0 chr5 138874961 138875048 -64210484 + AT_rich Low_complexity Low_complexity 1 87 0 23 86 0 0 chr5 138875083 138875141 -64210391 + AT_rich Low_complexity Low_complexity 1 58 0 212 164 60 15 chr5 138875256 138875323 -64210209 + (TTATA)n Simple_repeat Simple_repeat 3 72 0 692 93 0 0 chr5 138875324 138875421 -64210111 - L1PA6 LINE L1 -6 6148 6052 232 48 48 0 chr5 138875614 138875656 -64209876 + (TA)n Simple_repeat Simple_repeat 2 45 0 242 322 17 8 chr5 138875721 138875858 -64209674 - L1ME LINE L1 -551 5611 5473 333 308 38 59 chr5 138876349 138876586 -64208946 + L1M4c LINE L1 1 232 -6798 4685 244 76 25 chr5 138876842 138879529 -64206003 + L1M4c LINE L1 1262 4135 -2971 1027 320 100 6 chr5 138881004 138881120 -64204412 - L2 LINE L2 -1 3312 3208 348 24 0 0 chr5 138881120 138881161 -64204371 + (CA)n Simple_repeat Simple_repeat 2 42 0 1027 320 100 6 chr5 138881161 138881523 -64204009 - L2 LINE L2 -105 3208 2790 374 149 0 14 chr5 138882623 138882697 -64202835 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 378 307 57 7 chr5 138882754 138882894 -64202638 - MIR SINE MIR -57 205 59 288 194 16 0 chr5 138883549 138883611 -64201921 - MER94 DNA DNA -45 89 27 298 381 36 7 chr5 138883894 138884033 -64201499 + L2 LINE L2 3109 3251 -21 324 310 16 23 chr5 138884190 138884319 -64201213 - MIR SINE MIR -105 157 30 358 282 63 46 chr5 138886811 138886985 -64198547 + MIR SINE MIR 44 220 -42 383 291 204 0 chr5 138888770 138888942 -64196590 + MIR SINE MIR 48 254 -8 522 306 109 78 chr5 138889149 138889535 -64195997 + L2 LINE L2 2875 3272 0 180 200 0 0 chr5 138889824 138889864 -64195668 + GA-rich Low_complexity Low_complexity 1 40 0 1047 287 84 30 chr5 138890041 138890504 -64195028 - LTR33 LTR ERVL -33 488 1 21 0 0 0 chr5 138891378 138891399 -64194133 + AT_rich Low_complexity Low_complexity 1 21 0 499 285 35 29 chr5 138891457 138891629 -64193903 - MER5B DNA MER1_type -4 174 2 195 288 237 62 chr5 138891794 138891971 -64193561 + MIR SINE MIR 6 213 -49 22 56 0 0 chr5 138893419 138893455 -64192077 + AT_rich Low_complexity Low_complexity 1 36 0 267 306 82 0 chr5 138894539 138894637 -64190895 + MIR SINE MIR 59 164 -98 28 29 0 0 chr5 138894702 138894737 -64190795 + AT_rich Low_complexity Low_complexity 1 35 0 626 168 9 0 chr5 138895086 138895193 -64190339 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4452 118 27 15 chr5 138895184 138895927 -64189605 + Tigger3(Golem) DNA MER2_type 2277 3028 -1 322 281 73 0 chr5 138896150 138896246 -64189286 + LTR67 LTR ERVL 104 206 -351 321 331 71 11 chr5 138896360 138896544 -64188988 + LTR67 LTR ERVL 363 557 0 321 370 111 0 chr5 138897213 138897394 -64188138 - MIR SINE MIR -50 212 12 23 68 0 0 chr5 138897554 138897598 -64187934 + AT_rich Low_complexity Low_complexity 1 44 0 215 317 113 42 chr5 138898357 138898499 -64187033 + L3b LINE CR1 1395 1546 -37 33 66 0 0 chr5 138899776 138899837 -64185695 + AT_rich Low_complexity Low_complexity 1 61 0 227 258 54 109 chr5 138900161 138900382 -64185150 - L1MC/D LINE L1 -1990 5818 5610 1569 189 22 4 chr5 138900390 138900707 -64184825 - AluJb SINE Alu 0 324 3 741 324 59 36 chr5 138900875 138901418 -64184114 - L2 LINE L2 0 3313 2753 1654 192 60 31 chr5 138901429 138901814 -64183718 + MSTD LTR MaLR 1 396 0 1809 222 22 2 chr5 138901816 138902217 -64183315 + MSTD-int LTR MaLR 2 410 -1325 1681 175 3 50 chr5 138902221 138902603 -64182929 - L1PB1 LINE L1 -1230 4916 4553 262 146 104 0 chr5 138902607 138902655 -64182877 + L1PB1 LINE L1 4939 4991 -1155 2538 211 49 7 chr5 138902659 138903210 -64182322 + L1PA10 LINE L1 5 578 -5297 * 24932 155 12 18 chr5 138903197 138909273 -64176259 + L1PA10 LINE L1 383 6483 0 2111 155 43 15 chr5 138909263 138909880 -64175652 + L1PB1 LINE L1 4974 5607 -544 * 25490 79 5 8 chr5 138909876 138913374 -64172158 - L1PA5 LINE L1 -2196 3950 462 11238 59 2 2 chr5 138913377 138915593 -64169939 + L1PA5 LINE L1 3935 6154 0 3942 94 11 0 chr5 138915593 138916143 -64169389 + L1PB1 LINE L1 5593 6151 0 4188 251 99 37 chr5 138916148 138917405 -64168127 + MSTD-int LTR MaLR 402 1735 0 1239 175 72 84 chr5 138917405 138917807 -64167725 + MSTD LTR MaLR 1 432 0 310 248 95 9 chr5 138917807 138917912 -64167620 - L1MC/D LINE L1 -2325 5483 5370 734 169 65 0 chr5 138917919 138918043 -64167489 - AluJb SINE Alu -178 134 3 315 305 157 19 chr5 138918153 138918415 -64167117 - L1MC/D LINE L1 -906 5240 4943 32 26 0 0 chr5 138918852 138918891 -64166641 + AT_rich Low_complexity Low_complexity 1 39 0 473 289 243 0 chr5 138919023 138919175 -64166357 - MER5A DNA MER1_type 0 189 1 317 330 7 32 chr5 138919331 138919471 -64166061 - MLT1I LTR MaLR -205 206 81 439 314 151 48 chr5 138919760 138920117 -64165415 - MLT1J LTR MaLR -74 437 44 446 295 61 46 chr5 138920184 138920296 -64165236 - L1MC/D LINE L1 -2864 3282 3173 2050 141 0 0 chr5 138920296 138920595 -64164937 - AluSx SINE Alu -13 299 1 446 295 61 46 chr5 138920595 138920828 -64164704 - L1MC/D LINE L1 -2973 3173 2932 37 0 0 0 chr5 138920872 138920909 -64164623 + AT_rich Low_complexity Low_complexity 1 37 0 501 17 0 0 chr5 138922340 138922398 -64163134 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 445 245 33 26 chr5 138923842 138923993 -64161539 + MLT1L LTR MaLR 155 306 -309 244 225 108 36 chr5 138924116 138924227 -64161305 + MLT1L LTR MaLR 493 611 -4 237 317 28 106 chr5 138924668 138924810 -64160722 - L2 LINE L2 -199 3073 2943 207 221 29 73 chr5 138924891 138924959 -64160573 + MIR SINE MIR 1 65 -197 507 302 133 16 chr5 138924959 138925214 -64160318 - L2 LINE L2 -3 3310 3026 21 57 0 0 chr5 138925331 138925366 -64160166 + AT_rich Low_complexity Low_complexity 1 35 0 2434 49 0 0 chr5 138926238 138926573 -64158959 + AluY SINE Alu 1 335 0 2191 131 0 0 chr5 138927540 138927845 -64157687 - AluSx SINE Alu -7 305 1 427 146 62 0 chr5 138928345 138928475 -64157057 + (TA)n Simple_repeat Simple_repeat 2 139 0 1195 224 38 9 chr5 138928585 138928925 -64156607 + L1M4 LINE L1 2514 2863 -3283 2111 140 31 14 chr5 138928932 138929206 -64156326 + MER46B DNA MER2_type 2 160 -2571 1723 190 54 6 chr5 138929206 138929537 -64155995 + MER7A DNA MER2_type 1 345 -1 2111 140 31 14 chr5 138929537 138929613 -64155919 + MER46B DNA MER2_type 160 233 -3 306 294 11 11 chr5 138929616 138929708 -64155824 + L1M4 LINE L1 2869 2960 -3186 22 70 0 0 chr5 138929708 138929751 -64155781 + AT_rich Low_complexity Low_complexity 1 43 0 2207 78 34 0 chr5 138929763 138930056 -64155476 + AluSq SINE Alu 1 303 -10 688 263 66 26 chr5 138930117 138930421 -64155111 + L1M4 LINE L1 2981 3296 -2850 23 33 0 0 chr5 138930443 138930473 -64155059 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 138931141 138931174 -64154358 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 138931585 138931614 -64153918 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 138932080 138932115 -64153417 + AT_rich Low_complexity Low_complexity 1 35 0 327 154 0 0 chr5 138932258 138932323 -64153209 + (CA)n Simple_repeat Simple_repeat 1 65 0 3187 186 68 29 chr5 138932363 138933403 -64152129 - L1P4 LINE L1 -521 5645 4562 2063 121 56 31 chr5 138933403 138933758 -64151774 + THE1B LTR MaLR 1 364 0 11461 105 3 4 chr5 138933758 138935339 -64150193 + THE1B-int LTR MaLR 1 1580 0 2044 124 57 28 chr5 138935339 138935693 -64149839 + THE1B LTR MaLR 1 364 0 251 240 0 0 chr5 138935693 138935743 -64149789 - L1P4 LINE L1 -1580 4566 4517 2724 156 43 2 chr5 138935744 138936232 -64149300 + L1PA16 LINE L1 5656 6163 -3 530 206 344 9 chr5 138936366 138936584 -64148948 + MLT1E LTR MaLR 303 593 0 375 301 96 66 chr5 138936585 138937144 -64148388 - L1M4 LINE L1 -3321 2825 2240 347 193 11 0 chr5 138937151 138937239 -64148293 + (TG)n Simple_repeat Simple_repeat 2 90 0 10955 213 31 32 chr5 138937475 138943940 -64141592 - L1MA5 LINE L1 0 6942 2 453 333 0 0 chr5 138944995 138945124 -64140408 - MER94 DNA DNA -3 131 3 455 263 8 0 chr5 138945747 138945865 -64139667 - MLT1I LTR MaLR -18 391 273 280 281 52 0 chr5 138945977 138946073 -64139459 - MLT1I LTR MaLR -282 127 27 219 36 0 0 chr5 138947710 138947738 -64137794 + (TG)n Simple_repeat Simple_repeat 1 28 0 620 203 8 8 chr5 138948639 138948767 -64136765 + Tigger5 DNA MER2_type 2196 2323 0 717 266 131 12 chr5 138948767 138949019 -64136513 - MLT1D LTR MaLR -67 438 157 1963 202 32 29 chr5 138949040 138949816 -64135716 - MER21B LTR ERV1 -9 854 27 897 148 58 0 chr5 138949846 138950001 -64135531 - MLT1D LTR MaLR -341 164 1 261 0 0 0 chr5 138952612 138952641 -64132891 + (CA)n Simple_repeat Simple_repeat 1 29 0 22 56 0 0 chr5 138953376 138953412 -64132120 + AT_rich Low_complexity Low_complexity 1 36 0 474 283 143 22 chr5 138953603 138953800 -64131732 + L2 LINE L2 2451 2681 -633 309 26 0 0 chr5 138953800 138953838 -64131694 + (CA)n Simple_repeat Simple_repeat 1 38 0 474 283 143 22 chr5 138953838 138953870 -64131662 + L2 LINE L2 2681 2708 -606 21 71 0 0 chr5 138953879 138953921 -64131611 + AT_rich Low_complexity Low_complexity 1 42 0 337 275 154 33 chr5 138953975 138954157 -64131375 + L1ME3A LINE L1 5935 6138 -32 4574 192 44 37 chr5 138954178 138954727 -64130805 - L1MC2 LINE L1 -9 6615 6071 1398 124 59 26 chr5 138954727 138955000 -64130532 - L1MA5A LINE L1 0 6297 6016 4574 192 44 37 chr5 138955000 138955887 -64129645 - L1MC2 LINE L1 -553 6071 5171 4060 140 2 0 chr5 138955887 138956503 -64129029 + Tigger1 DNA MER2_type 1802 2418 0 4293 228 120 60 chr5 138956517 138959580 -64125952 - L1MC2 LINE L1 -3135 3291 45 846 316 55 7 chr5 138959642 138960021 -64125511 + L2 LINE L2 2711 3127 -186 3994 138 40 40 chr5 138960021 138960747 -64124785 + LTR8A LTR ERV1 1 726 -1 846 316 55 7 chr5 138960747 138960860 -64124672 + L2 LINE L2 3127 3233 -80 607 310 105 6 chr5 138961971 138962284 -64123248 - L1MC/D LINE L1 -2151 5657 5314 581 278 80 59 chr5 138962664 138962867 -64122665 - L1MC/D LINE L1 -1164 4982 4785 2077 187 6 0 chr5 138962867 138963230 -64122302 + MLT1A1 LTR MaLR 1 365 0 581 278 80 59 chr5 138963230 138963486 -64122046 - L1MC/D LINE L1 -1361 4785 4513 821 134 62 78 chr5 138963487 138963666 -64121866 - LTR47A LTR ERVL 0 452 277 541 170 0 57 chr5 138963931 138964037 -64121495 - PABL_B-int LTR ERV1 -681 6077 5978 787 353 69 52 chr5 138964249 138965309 -64120223 - PABL_B-int LTR ERV1 -447 6675 5598 1673 336 60 68 chr5 138965963 138968693 -64116839 - LTR57-int LTR ERVL -1255 4088 1525 726 194 88 6 chr5 138970215 138970385 -64115147 - LTR47A LTR ERVL -8 444 261 246 22 22 44 chr5 138970629 138970674 -64114858 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 2390 53 0 0 chr5 138970678 138970961 -64114571 - AluY SINE Alu -28 283 1 247 304 78 20 chr5 138971223 138971325 -64114207 + L2 LINE L2 3167 3274 -39 214 293 91 40 chr5 138971438 138971537 -64113995 + MIR SINE MIR 48 151 -111 599 284 211 31 chr5 138971740 138972128 -64113404 - LTR16B LTR ERVL -6 458 1 849 168 0 0 chr5 138974385 138974522 -64111010 + FLAM_C SINE Alu 1 137 -6 22 0 0 0 chr5 138974902 138974924 -64110608 + AT_rich Low_complexity Low_complexity 1 22 0 850 340 14 17 chr5 138976861 138977220 -64108312 - MLT1J LTR MaLR -53 458 101 230 357 12 0 chr5 138977723 138977807 -64107725 + MIR SINE MIR 68 152 -110 804 348 67 36 chr5 138977859 138978411 -64107121 + L2 LINE L2 2398 2966 -348 375 113 0 0 chr5 138980086 138980148 -64105384 + (CA)n Simple_repeat Simple_repeat 1 62 0 314 304 36 86 chr5 138981026 138981352 -64104180 + L1MEd LINE L1 866 1276 -1214 1716 210 59 3 chr5 138981368 138981759 -64103773 + L1M4 LINE L1 4624 5036 -1110 1380 191 140 3 chr5 138981768 138982125 -64103407 + L1P4 LINE L1 5291 5698 -476 1959 133 13 3 chr5 138982425 138982726 -64102806 - AluSx SINE Alu -8 304 1 213 94 0 0 chr5 138982744 138982776 -64102756 + (A)n Simple_repeat Simple_repeat 1 32 0 191 99 84 14 chr5 138984499 138984570 -64100962 + (TA)n Simple_repeat Simple_repeat 1 76 0 27 29 0 0 chr5 138985153 138985187 -64100345 + AT_rich Low_complexity Low_complexity 1 34 0 234 156 0 0 chr5 138987762 138987807 -64097725 + (TA)n Simple_repeat Simple_repeat 1 45 0 448 346 30 26 chr5 138988330 138988561 -64096971 + MIR SINE MIR 6 237 -25 334 365 152 29 chr5 138988855 138989409 -64096123 + L2 LINE L2 1793 2277 -1037 1303 209 78 17 chr5 138989409 138989753 -64095779 - MLT1A1 LTR MaLR 0 365 1 334 365 152 29 chr5 138989753 138990076 -64095456 + L2 LINE L2 2277 2778 -536 1929 178 30 54 chr5 138990126 138990150 -64095382 - MER47B DNA MER2_type -1905 418 395 2411 156 34 10 chr5 138990150 138990566 -64094966 + MSTB LTR MaLR 1 426 0 1929 178 30 54 chr5 138990566 138990969 -64094563 - MER47B DNA MER2_type -1928 395 1 229 349 101 58 chr5 138991032 138991359 -64094173 + L2 LINE L2 2923 3263 -9 300 53 0 0 chr5 138992715 138992753 -64092779 + (TG)n Simple_repeat Simple_repeat 2 39 0 211 139 0 23 chr5 138993447 138993490 -64092042 + (TAAAAA)n Simple_repeat Simple_repeat 2 43 0 411 301 57 54 chr5 138993551 138993903 -64091629 + L1ME4a LINE L1 5571 5923 -198 600 331 15 15 chr5 138993908 138994168 -64091364 + MIR SINE MIR 2 261 -1 296 267 12 0 chr5 138994626 138994712 -64090820 - MLT1I LTR MaLR -243 166 80 360 279 64 52 chr5 138995612 138995784 -64089748 + MIR SINE MIR 4 177 -85 222 167 0 74 chr5 138996067 138996121 -64089411 - MIR SINE MIR -122 140 91 206 201 35 116 chr5 138996646 138996760 -64088772 - MIR SINE MIR -95 113 7 240 353 103 7 chr5 138996994 138997130 -64088402 - MIR SINE MIR -61 201 53 269 118 9 30 chr5 139000464 139000530 -64085002 - MLT2C1 LTR ERVL 0 514 352 491 68 0 14 chr5 139000530 139000603 -64084929 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 844 234 17 92 chr5 139000603 139000898 -64084634 - MLT2B1 LTR ERVL -20 500 228 23 0 0 0 chr5 139002624 139002647 -64082885 + AT_rich Low_complexity Low_complexity 1 23 0 328 277 75 0 chr5 139002685 139002779 -64082753 - MIR SINE MIR -56 206 106 187 330 144 42 chr5 139003104 139003222 -64082310 + L2 LINE L2 1069 1198 -2116 228 35 0 0 chr5 139003287 139003316 -64082216 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1964 118 54 135 chr5 139004290 139004756 -64080776 + MSTA LTR MaLR 1 428 0 1572 169 38 57 chr5 139006615 139006987 -64078545 - MLT1A1 LTR MaLR 0 365 1 278 264 28 0 chr5 139007157 139007229 -64078303 + GA-rich Low_complexity Low_complexity 3 76 0 186 43 0 0 chr5 139008131 139008154 -64077378 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 261 75 0 0 chr5 139008904 139008944 -64076588 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 21 57 0 0 chr5 139010389 139010424 -64075108 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 139011247 139011289 -64074243 + AT_rich Low_complexity Low_complexity 1 42 0 250 318 107 23 chr5 139012055 139012213 -64073319 - MIR SINE MIR -34 228 63 219 36 0 0 chr5 139013110 139013138 -64072394 + (A)n Simple_repeat Simple_repeat 1 28 0 246 226 75 0 chr5 139013532 139013585 -64071947 + MIR SINE MIR 87 143 -65 2521 144 5 32 chr5 139013600 139014038 -64071494 + LTR1B LTR ERV1 14 439 -387 7984 156 23 47 chr5 139014075 139014528 -64071004 + L1PA7 LINE L1 1148 1610 -5974 2244 83 0 20 chr5 139014528 139014829 -64070703 + AluY SINE Alu 1 295 -16 7984 156 23 47 chr5 139014829 139016043 -64069489 + L1PA7 LINE L1 1610 3605 -3979 11341 97 2 0 chr5 139016044 139018430 -64067102 + L1PA7 LINE L1 5194 7585 -7 1313 178 109 17 chr5 139018446 139018788 -64066744 + LTR1B LTR ERV1 425 783 -2 1655 222 78 67 chr5 139018974 139019484 -64066048 + MER77 LTR ERV1 54 569 -36 263 71 24 0 chr5 139020803 139020845 -64064687 + (TA)n Simple_repeat Simple_repeat 2 44 0 195 42 0 0 chr5 139022018 139022042 -64063490 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 440 183 58 29 chr5 139022062 139022166 -64063366 - L2 LINE L2 -25 3288 3182 6763 99 24 0 chr5 139022184 139023157 -64062375 - L1PA7 LINE L1 -1670 4476 3481 6262 69 43 0 chr5 139023157 139024780 -64060752 + L1PA7 LINE L1 4490 6148 -6 272 278 112 47 chr5 139024801 139024970 -64060562 - L2 LINE L2 -157 3156 2977 335 354 74 9 chr5 139024997 139025226 -64060306 - MIR SINE MIR -11 251 8 419 288 92 72 chr5 139026311 139026770 -64058762 + L1ME LINE L1 141 608 -5597 226 263 40 40 chr5 139027023 139027122 -64058410 + L1ME LINE L1 655 753 -5452 8479 47 19 1 chr5 139027284 139028402 -64057130 - L1PA4 LINE L1 -1115 5031 3894 7475 35 0 0 chr5 139028412 139029522 -64056010 + L1PA4 LINE L1 5033 6142 -13 1614 273 71 28 chr5 139029547 139030565 -64054967 + L1ME LINE L1 1064 2141 -4074 180 77 0 0 chr5 139030565 139030591 -64054941 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 1614 273 71 28 chr5 139030591 139031233 -64054299 + L1ME LINE L1 2141 2754 -3461 732 113 0 9 chr5 139031236 139031351 -64054181 - L1PA7 LINE L1 -131 6023 5910 381 246 29 7 chr5 139031391 139031529 -64054003 - L1M4 LINE L1 -3821 2325 2185 * 3234 215 60 26 chr5 139031500 139033389 -64052143 - L1PA7 LINE L1 -251 5903 3906 2036 139 71 82 chr5 139033488 139033954 -64051578 - LOR1b LTR ERV1 0 461 1 2464 66 0 7 chr5 139033976 139034280 -64051252 - AluY SINE Alu -9 302 1 402 115 128 0 chr5 139034316 139034394 -64051138 + AluSg/x SINE Alu 210 297 -12 307 244 24 24 chr5 139034468 139034550 -64050982 + L1ME1 LINE L1 6073 6154 -12 976 320 83 16 chr5 139037315 139037702 -64047830 - L2 LINE L2 -3 3310 2898 * 2087 319 61 22 chr5 139037692 139038709 -64046823 - L2 LINE L2 -2215 1099 43 1456 101 59 9 chr5 139039298 139039517 -64046015 - MER30 DNA MER1_type 0 230 1 784 257 78 96 chr5 139039604 139040156 -64045376 - MER34 LTR ERV1 0 542 1 228 361 66 16 chr5 139040183 139040366 -64045166 - L3 LINE CR1 -195 1382 1191 1134 258 0 4 chr5 139040980 139041232 -64044300 - Charlie1a DNA MER1_type -1204 251 1 248 184 40 13 chr5 139042051 139042127 -64043405 + (TA)n Simple_repeat Simple_repeat 1 78 0 29 47 0 0 chr5 139043573 139043616 -64041916 + AT_rich Low_complexity Low_complexity 1 43 0 260 272 43 22 chr5 139043996 139044088 -64041444 + MIR SINE MIR 29 122 -140 180 0 0 0 chr5 139044259 139044279 -64041253 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 1778 202 115 97 chr5 139044797 139044862 -64040670 - LTR1B LTR ERV1 -81 745 683 7550 27 0 0 chr5 139044862 139045915 -64039617 - L1PA4 LINE L1 -1 6154 5098 1778 202 115 97 chr5 139045915 139046581 -64038951 - LTR1B LTR ERV1 -143 683 1 965 254 76 50 chr5 139047484 139047866 -64037666 - LTR16A1 LTR ERVL -65 392 1 25 65 0 0 chr5 139047960 139048006 -64037526 + AT_rich Low_complexity Low_complexity 1 46 0 248 219 0 27 chr5 139048058 139048131 -64037401 + (TATG)n Simple_repeat Simple_repeat 2 72 0 253 329 200 12 chr5 139048131 139048301 -64037231 - MIR SINE MIR -55 207 6 27 29 0 0 chr5 139048313 139048347 -64037185 + AT_rich Low_complexity Low_complexity 1 34 0 454 210 42 0 chr5 139048646 139048765 -64036767 - MER103 DNA DNA -9 157 34 393 22 0 0 chr5 139050640 139050686 -64034846 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 248 286 0 22 chr5 139051453 139051544 -64033988 + GA-rich Low_complexity Low_complexity 3 91 0 275 133 27 27 chr5 139052297 139052372 -64033160 + CT-rich Low_complexity Low_complexity 3 77 0 221 360 53 18 chr5 139054139 139054253 -64031279 - L2 LINE L2 -202 3070 2953 285 304 89 9 chr5 139056392 139056504 -64029028 + L2 LINE L2 3180 3300 -13 183 42 0 0 chr5 139056504 139056528 -64029004 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1801 218 52 14 chr5 139057004 139057730 -64027802 - L1MEc LINE L1 -3373 2842 2015 709 251 0 0 chr5 139057811 139057974 -64027558 - L1MEc LINE L1 -4574 1822 1660 2637 170 116 22 chr5 139057986 139058254 -64027278 - L1MD1 LINE L1 -8 6234 5993 1952 117 0 71 chr5 139058254 139058578 -64026954 + AluSx SINE Alu 1 301 -11 2637 170 116 22 chr5 139058578 139058896 -64026636 - L1MD1 LINE L1 -249 5993 5593 383 258 24 65 chr5 139059648 139059772 -64025760 + L2 LINE L2 3178 3296 -17 2690 226 70 19 chr5 139059772 139060969 -64024563 - L1MD1 LINE L1 -624 5618 4353 253 156 16 16 chr5 139061247 139061311 -64024221 + GA-rich Low_complexity Low_complexity 3 66 0 2040 193 0 10 chr5 139061709 139062103 -64023429 - MLT1B LTR MaLR 0 390 1 1184 205 13 23 chr5 139062412 139062431 -64023101 - L1MC2 LINE L1 -2 6342 6324 1650 170 35 0 chr5 139062431 139062719 -64022813 - AluJo SINE Alu -14 298 1 1184 205 13 23 chr5 139062719 139063002 -64022530 - L1MC2 LINE L1 -20 6324 6043 24 77 0 0 chr5 139063829 139063881 -64021651 + AT_rich Low_complexity Low_complexity 1 52 0 741 182 54 22 chr5 139064837 139065064 -64020468 + L1M4c LINE L1 774 1176 -5387 2489 291 75 31 chr5 139065067 139065645 -64019887 + L1M4c LINE L1 1215 1766 -4797 2084 109 3 16 chr5 139065645 139065949 -64019583 + AluSg SINE Alu 6 305 -5 2489 291 75 31 chr5 139065949 139066676 -64018856 + L1M4c LINE L1 1766 2578 -3985 2169 171 24 39 chr5 139067267 139067735 -64017797 + MER65C LTR ERV1 1 461 0 286 268 136 38 chr5 139067923 139068136 -64017396 + HAL1 LINE L1 2241 2474 -33 1646 162 3 30 chr5 139068607 139068903 -64016629 + AluJo SINE Alu 1 288 -24 29 47 0 0 chr5 139072748 139072791 -64012741 + AT_rich Low_complexity Low_complexity 1 43 0 566 298 84 5 chr5 139073010 139073201 -64012331 - MLT1J LTR MaLR 0 511 306 353 202 32 64 chr5 139073226 139073320 -64012212 - MLT1J LTR MaLR -177 334 244 420 320 36 36 chr5 139073565 139073815 -64011717 - L1M4 LINE L1 -3756 2390 2141 25 0 0 0 chr5 139073847 139073872 -64011660 + AT_rich Low_complexity Low_complexity 1 25 0 358 221 71 80 chr5 139074273 139074386 -64011146 + MLT1J LTR MaLR 228 339 -172 304 209 47 35 chr5 139074406 139074492 -64011040 + MLT1J LTR MaLR 317 403 -108 510 336 111 29 chr5 139075318 139075830 -64009702 - HAL1 LINE L1 -1517 990 437 3743 146 71 6 chr5 139076964 139077628 -64007904 - MER39 LTR ERV1 0 707 1 13611 188 29 22 chr5 139079544 139081767 -64003765 - L1MA3 LINE L1 0 7724 5519 1501 109 45 0 chr5 139081767 139081987 -64003545 + MER30 DNA MER1_type 1 230 0 13611 188 29 22 chr5 139081987 139087070 -63998462 - L1MA3 LINE L1 -2205 5519 21 367 307 101 18 chr5 139087923 139088141 -63997391 + MER65C-int LTR ERV1 135 370 -6279 2042 296 56 48 chr5 139088794 139091177 -63994355 + MER65C-int LTR ERV1 954 3812 -3973 44104 37 2 1 chr5 139091199 139097351 -63988181 - L1PA3 LINE L1 -1 6154 1 2250 324 42 35 chr5 139097496 139099368 -63986164 + LOR1b-int LTR ERV1 2852 5756 -2029 1814 311 39 48 chr5 139100134 139101329 -63984203 + LOR1b-int LTR ERV1 5329 6511 -138 4701 291 68 20 chr5 139102005 139106137 -63979395 + L1ME LINE L1 8 4401 -1679 2016 205 36 2 chr5 139106137 139106581 -63978951 + LOR1b LTR ERV1 1 459 -2 4701 291 68 20 chr5 139106581 139106902 -63978630 + L1ME LINE L1 4401 4705 -1375 3110 167 8 39 chr5 139106894 139107529 -63978003 + L1 LINE L1 3643 4257 -1889 * 207 69 0 0 chr5 139108355 139108384 -63977148 + (CA)n Simple_repeat Simple_repeat 2 30 0 254 182 111 40 chr5 139110581 139110680 -63974852 - MER104 DNA Tc2 -61 119 14 249 97 0 65 chr5 139111144 139111206 -63974326 + (TTCTCC)n Simple_repeat Simple_repeat 6 63 0 27 29 0 0 chr5 139112227 139112261 -63973271 + AT_rich Low_complexity Low_complexity 1 34 0 26 30 0 0 chr5 139112365 139112398 -63973134 + AT_rich Low_complexity Low_complexity 1 33 0 6301 137 9 10 chr5 139112403 139113106 -63972426 + L1MC1 LINE L1 5309 6012 -321 3651 101 0 12 chr5 139113106 139113623 -63971909 + MER9 LTR ERVK 1 511 0 6301 137 9 10 chr5 139113623 139113936 -63971596 + L1MC1 LINE L1 6012 6324 -9 1889 182 5 3 chr5 139114543 139114922 -63970610 + L1MA4 LINE L1 3935 4314 -1832 714 92 9 9 chr5 139114924 139115033 -63970499 + MSTA-int LTR MaLR 1543 1651 0 2064 141 120 5 chr5 139115033 139115417 -63970115 + MSTA LTR MaLR 1 428 0 3996 156 63 6 chr5 139115432 139116158 -63969374 + L1MA4 LINE L1 5254 6021 -279 364 186 35 0 chr5 139116161 139116247 -63969285 + L1MB3 LINE L1 6087 6175 -8 1963 203 26 11 chr5 139116576 139117040 -63968492 + Charlie1 DNA MER1_type 2097 2567 -194 22 56 0 0 chr5 139117417 139117453 -63968079 + AT_rich Low_complexity Low_complexity 1 36 0 2570 240 28 76 chr5 139118399 139119611 -63965921 + L1M4 LINE L1 2453 3606 -2540 21 0 0 0 chr5 139120794 139120815 -63964717 + AT_rich Low_complexity Low_complexity 1 21 0 287 109 14 44 chr5 139122133 139122204 -63963328 - L1MA5 LINE L1 -2 6301 6230 383 376 0 8 chr5 139122216 139122341 -63963191 + L2 LINE L2 3141 3264 -8 376 328 78 2 chr5 139122474 139122659 -63962873 - MIR SINE MIR -63 199 3 333 289 156 28 chr5 139123936 139124147 -63961385 + L1MC4a LINE L1 5776 6013 -1795 503 329 55 13 chr5 139124560 139124870 -63960662 + L1MC4a LINE L1 5563 5885 -1923 24 0 0 0 chr5 139125087 139125111 -63960421 + AT_rich Low_complexity Low_complexity 1 24 0 487 301 27 90 chr5 139125822 139126187 -63959345 - L2 LINE L2 -4 3309 2968 764 273 79 18 chr5 139126228 139126506 -63959026 - L2 LINE L2 -1154 2160 1866 2929 174 22 2 chr5 139126697 139127207 -63958325 - MLT2B1 LTR ERVL 0 520 1 28 48 0 0 chr5 139127363 139127405 -63958127 + AT_rich Low_complexity Low_complexity 1 42 0 1799 176 91 12 chr5 139127405 139127746 -63957786 - MSTA LTR MaLR -60 368 1 4572 208 23 0 chr5 139127793 139128824 -63956708 - L1 LINE L1 -2109 4037 2983 4159 185 7 1 chr5 139128822 139129704 -63955828 + L1P LINE L1 2806 3693 -3169 * 258 286 95 17 chr5 139129867 139130161 -63955371 - L1M4 LINE L1 -2989 3157 2841 1105 225 44 54 chr5 139131698 139132014 -63953518 + MLT2C1 LTR ERVL 27 339 -58 313 164 49 0 chr5 139132526 139132587 -63952945 + MLT1E3 LTR MaLR 561 624 0 882 343 47 30 chr5 139132636 139132730 -63952802 + MERVL LTR ERVL 3091 3182 -2582 1680 205 67 87 chr5 139132730 139133295 -63952237 - MLT2B3 LTR ERVL 0 554 1 882 343 47 30 chr5 139133295 139133737 -63951795 + MERVL LTR ERVL 3182 3636 -2128 255 281 45 39 chr5 139133956 139134134 -63951398 + MERVL LTR ERVL 5146 5324 -161 445 333 7 14 chr5 139134384 139134525 -63951007 + LTR16C LTR ERVL 99 238 -253 461 254 9 0 chr5 139134818 139134932 -63950600 - Charlie2a DNA MER1_type -1198 1664 1550 205 207 24 12 chr5 139134980 139135062 -63950470 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 2870 162 32 13 chr5 139135080 139135606 -63949926 - MER34B LTR ERV1 -29 536 1 363 289 29 10 chr5 139135778 139135882 -63949650 - Charlie2 DNA MER1_type -2585 277 172 258 326 68 8 chr5 139136065 139136197 -63949335 + MIR SINE MIR 68 207 -55 216 0 0 0 chr5 139138699 139138723 -63946809 + (A)n Simple_repeat Simple_repeat 1 24 0 211 296 127 0 chr5 139138975 139139046 -63946486 - MIR3 SINE MIR -9 199 120 270 216 179 72 chr5 139139137 139139441 -63946091 - MER102b DNA MER1_type -28 313 2 3373 114 12 2 chr5 139140281 139140773 -63944759 - LOR1a LTR ERV1 0 497 1 198 303 91 23 chr5 139141260 139141392 -63944140 - L3b LINE CR1 -332 1251 1111 554 315 6 22 chr5 139142809 139142990 -63942542 + MER45A DNA AcHobo 1 178 0 233 297 0 0 chr5 139143098 139143162 -63942370 + GA-rich Low_complexity Low_complexity 1 64 0 24 53 0 0 chr5 139146586 139146624 -63938908 + AT_rich Low_complexity Low_complexity 1 38 0 298 315 23 8 chr5 139151826 139151956 -63933576 + MER103 DNA DNA 4 135 -31 590 210 40 0 chr5 139153164 139153288 -63932244 - Charlie1b DNA MER1_type 0 523 395 1118 239 55 0 chr5 139153308 139153580 -63931952 - Charlie1b DNA MER1_type -236 287 1 306 246 70 43 chr5 139153884 139154003 -63931529 - MIR SINE MIR -65 143 48 1261 257 127 36 chr5 139154412 139154988 -63930544 + MER20B DNA MER1_type 110 737 -46 14753 180 47 16 chr5 139155186 139159886 -63925646 - L1MA3 LINE L1 0 7724 3169 237 33 0 0 chr5 139159886 139159916 -63925616 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14753 180 47 16 chr5 139159916 139161907 -63923625 - L1MA3 LINE L1 -4555 3169 126 2249 109 3 0 chr5 139161907 139162209 -63923323 - AluSq SINE Alu -7 306 4 14753 180 47 16 chr5 139162209 139162328 -63923204 - L1MA3 LINE L1 -7598 126 12 26 0 0 0 chr5 139163653 139163679 -63921853 + AT_rich Low_complexity Low_complexity 1 26 0 365 287 30 43 chr5 139163755 139163919 -63921613 + MIR SINE MIR 31 192 -70 210 371 24 8 chr5 139164335 139164459 -63921073 + L2 LINE L2 2198 2323 -991 2071 116 14 3 chr5 139165380 139165672 -63919860 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr5 139165990 139166019 -63919513 + AT_rich Low_complexity Low_complexity 1 29 0 2854 3 0 6 chr5 139166178 139166491 -63919041 - AluYa5 SINE Alu 0 311 1 258 187 125 18 chr5 139167818 139167921 -63917611 - MLT1I LTR MaLR -43 407 295 1721 142 44 78 chr5 139168156 139168543 -63916989 + THE1C LTR MaLR 2 375 0 2505 162 20 13 chr5 139168684 139169134 -63916398 + Tigger1 DNA MER2_type 2 454 -1964 8821 107 8 1 chr5 139169134 139169461 -63916071 + L1PA8 LINE L1 4000 4323 -1849 2143 105 0 13 chr5 139169461 139169766 -63915766 + AluSg SINE Alu 1 301 -9 8821 107 8 1 chr5 139169766 139170436 -63915096 + L1PA8 LINE L1 4323 4987 -1185 2415 70 7 0 chr5 139170436 139170735 -63914797 + AluY SINE Alu 1 301 -10 8821 107 8 1 chr5 139170735 139171913 -63913619 + L1PA8 LINE L1 4987 6171 -1 4806 70 30 2 chr5 139171932 139172574 -63912958 + L1PA8 LINE L1 5487 6146 -26 636 14 0 0 chr5 139172576 139172649 -63912883 + (TAAAA)n Simple_repeat Simple_repeat 1 73 0 22 0 0 0 chr5 139172796 139172818 -63912714 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr5 139173785 139173815 -63911717 + AT_rich Low_complexity Low_complexity 1 30 0 594 348 18 14 chr5 139174559 139174780 -63910752 - MIR SINE MIR -14 248 27 6612 25 0 4 chr5 139178050 139178838 -63906694 - L1P LINE L1 -1401 4745 3961 1583 85 23 47 chr5 139178838 139179096 -63906436 + MER61-int LTR ERV1 2778 3029 -2188 360 43 0 0 chr5 139179292 139179338 -63906194 + (CA)n Simple_repeat Simple_repeat 1 46 0 392 298 118 22 chr5 139179416 139179594 -63905938 - MIR SINE MIR -50 212 18 191 339 0 16 chr5 139181162 139181224 -63904308 + L2 LINE L2 3007 3067 -205 1598 162 96 10 chr5 139181834 139182148 -63903384 + MER61A LTR ERV1 1 341 -2 265 59 0 0 chr5 139182257 139182291 -63903241 + HSMAR1 DNA Mariner 1254 1287 0 270 259 0 0 chr5 139182652 139182710 -63902822 - MLT1L LTR MaLR -557 58 1 479 336 49 28 chr5 139182716 139183248 -63902284 + HAL1 LINE L1 1125 1667 -840 283 259 9 18 chr5 139183926 139184038 -63901494 + L1M4 LINE L1 2440 2550 -3596 23 54 0 0 chr5 139184237 139184274 -63901258 + AT_rich Low_complexity Low_complexity 1 37 0 1978 131 0 7 chr5 139184424 139184721 -63900811 - AluY SINE Alu -16 295 1 1754 165 11 0 chr5 139184941 139185220 -63900312 + AluJb SINE Alu 1 282 -30 21 36 0 0 chr5 139185600 139185628 -63899904 + AT_rich Low_complexity Low_complexity 1 28 0 931 232 51 167 chr5 139185654 139186151 -63899381 + L2 LINE L2 1263 1816 -1498 369 0 0 0 chr5 139186151 139186192 -63899340 + (TC)n Simple_repeat Simple_repeat 1 41 0 192 97 0 0 chr5 139186191 139186222 -63899310 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 931 232 51 167 chr5 139186192 139186531 -63899001 + L2 LINE L2 1816 1975 -1339 211 304 0 0 chr5 139186645 139186714 -63898818 + (CA)n Simple_repeat Simple_repeat 2 70 0 763 241 82 19 chr5 139186722 139186929 -63898603 + L2 LINE L2 3094 3313 0 387 0 0 0 chr5 139187280 139187323 -63898209 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 225 196 0 0 chr5 139189606 139189652 -63895880 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 139190209 139190230 -63895302 + AT_rich Low_complexity Low_complexity 1 21 0 267 276 97 62 chr5 139190791 139191033 -63894499 + MIR SINE MIR 2 258 -4 31 88 0 0 chr5 139191398 139191478 -63894054 + AT_rich Low_complexity Low_complexity 1 80 0 1810 112 0 90 chr5 139191934 139192256 -63893276 + AluSx SINE Alu 1 293 -19 504 218 296 0 chr5 139192507 139192649 -63892883 + MER5A DNA MER1_type 6 189 0 1571 222 137 17 chr5 139192738 139193331 -63892201 - MER39 LTR ERV1 0 707 6 1653 183 0 0 chr5 139193360 139193634 -63891898 + AluJo SINE Alu 24 297 -15 2360 169 14 27 chr5 139193830 139194268 -63891264 + MSTB1 LTR MaLR 1 432 0 819 227 58 70 chr5 139194531 139194928 -63890604 + L1ME3A LINE L1 5775 6166 -4 1409 211 26 26 chr5 139195008 139195312 -63890220 + AluJo SINE Alu 5 308 -4 1307 161 34 22 chr5 139195329 139195596 -63889936 - MER89 LTR ERV1 -14 545 276 440 243 27 0 chr5 139195709 139195820 -63889712 - MER89 LTR ERV1 -445 114 1 912 287 47 28 chr5 139195996 139196425 -63889107 + L1MC4a LINE L1 5466 5902 -1906 195 42 0 0 chr5 139196434 139196458 -63889074 + (CA)n Simple_repeat Simple_repeat 2 25 0 1909 132 25 4 chr5 139196527 139196855 -63888677 + MER7A DNA MER2_type 13 346 0 278 304 97 59 chr5 139196908 139197300 -63888232 + L1MC4a LINE L1 5510 5916 -1892 267 239 33 54 chr5 139197512 139197604 -63887928 - MLT1J2 LTR MaLR -294 156 67 22 35 0 0 chr5 139197781 139197810 -63887722 + AT_rich Low_complexity Low_complexity 1 29 0 447 362 54 54 chr5 139197892 139198279 -63887253 - L2 LINE L2 -1669 1645 1259 2041 118 0 0 chr5 139198756 139199060 -63886472 + AluY SINE Alu 1 304 0 687 272 125 1 chr5 139199173 139199530 -63886002 - MLT2F LTR ERVL -81 582 139 14011 195 41 17 chr5 139199556 139204419 -63881113 + L1PA13 LINE L1 2 4999 -1798 1909 124 0 7 chr5 139204418 139204725 -63880807 + L1PB1 LINE L1 5785 6089 -62 * 25 51 0 0 chr5 139204741 139204780 -63880752 + AT_rich Low_complexity Low_complexity 1 39 0 313 224 15 0 chr5 139204803 139204870 -63880662 - MLT2F LTR ERVL -566 97 30 186 433 47 13 chr5 139205427 139205577 -63879955 - L2 LINE L2 -2052 1262 1108 291 277 40 10 chr5 139206215 139206316 -63879216 - L2 LINE L2 -210 3062 2959 2499 278 80 96 chr5 139207484 139208105 -63877427 + L2 LINE L2 8 638 -2676 251 281 31 0 chr5 139208105 139208201 -63877331 - MER94 DNA DNA -34 100 2 2499 278 80 96 chr5 139208201 139208631 -63876901 + L2 LINE L2 638 1074 -2240 2231 121 16 29 chr5 139208631 139209011 -63876521 - THE1C LTR MaLR 0 375 1 2499 278 80 96 chr5 139209011 139209100 -63876432 + L2 LINE L2 1074 1163 -2151 183 80 0 0 chr5 139209100 139209125 -63876407 + (CA)n Simple_repeat Simple_repeat 2 26 0 2499 278 80 96 chr5 139209125 139209478 -63876054 + L2 LINE L2 1163 1572 -1742 21 0 0 0 chr5 139210439 139210460 -63875072 + AT_rich Low_complexity Low_complexity 1 21 0 403 286 61 48 chr5 139212370 139212948 -63872584 + L1MC/D LINE L1 4400 4984 -1162 1983 167 0 0 chr5 139213087 139213387 -63872145 + AluSx SINE Alu 1 300 -12 266 312 109 36 chr5 139213485 139213905 -63871627 + L1MC/D LINE L1 5295 5745 -2063 31 0 0 0 chr5 139214212 139214243 -63871289 + AT_rich Low_complexity Low_complexity 1 31 0 315 266 8 40 chr5 139215329 139215453 -63870079 + MIR SINE MIR 128 247 -15 2207 104 0 0 chr5 139216308 139216597 -63868935 + AluSg SINE Alu 1 289 -21 1777 162 0 11 chr5 139217722 139218006 -63867526 + AluJb SINE Alu 22 302 -10 2436 107 0 0 chr5 139218525 139218835 -63866697 + AluSx SINE Alu 1 310 -2 1362 190 22 11 chr5 139222433 139222707 -63862825 + MER61A LTR ERV1 66 342 -1 1074 144 0 0 chr5 139222910 139223090 -63862442 + (TA)n Simple_repeat Simple_repeat 1 180 0 2291 81 3 7 chr5 139223090 139223385 -63862147 - AluSg SINE Alu -16 294 1 2168 114 0 0 chr5 139223385 139223674 -63861858 - AluSx SINE Alu -23 289 1 894 254 65 39 chr5 139223815 139224248 -63861284 - L1ME3A LINE L1 -26 6144 5701 3401 191 8 9 chr5 139224932 139225586 -63859946 - MER82 DNA MER2_type 0 653 1 23 0 0 0 chr5 139226856 139226879 -63858653 + AT_rich Low_complexity Low_complexity 1 23 0 1305 228 89 64 chr5 139229574 139229695 -63855837 - LTR9 LTR ERV1 0 612 496 1700 104 127 4 chr5 139229695 139229977 -63855555 + AluSx SINE Alu 1 312 0 1305 228 89 64 chr5 139229977 139230452 -63855080 - LTR9 LTR ERV1 -116 496 1 238 231 0 0 chr5 139231232 139231284 -63854248 + LTR30 LTR ERV1 1 52 -670 2164 96 148 159 chr5 139231284 139231898 -63853634 + LTR12 LTR ERV1 57 2427 -11 225 0 0 0 chr5 139231929 139231954 -63853578 + (A)n Simple_repeat Simple_repeat 1 25 0 590 287 10 10 chr5 139232096 139232291 -63853241 + MER20 DNA MER1_type 24 218 -1 1976 83 16 0 chr5 139232349 139232603 -63852929 - AluY SINE Alu -8 303 46 463 286 131 22 chr5 139233099 139233419 -63852113 - L1MC4a LINE L1 -297 5824 5564 262 269 169 0 chr5 139233443 139233644 -63851888 - L1MC4a LINE L1 -2296 5512 5278 28 29 0 0 chr5 139233804 139233839 -63851693 + AT_rich Low_complexity Low_complexity 1 35 0 2056 117 4 0 chr5 139233865 139234139 -63851393 - AluSp SINE Alu -4 309 35 225 291 187 0 chr5 139234187 139234390 -63851142 - L1MC4a LINE L1 -1182 4964 4724 2026 135 13 13 chr5 139234601 139234905 -63850627 - AluSx SINE Alu -8 304 1 2746 16 0 0 chr5 139237090 139237397 -63848135 - AluYa5 SINE Alu -4 307 1 781 198 39 0 chr5 139238231 139238413 -63847119 - MER53 DNA DNA 0 189 1 18916 153 47 5 chr5 139238452 139240673 -63844859 + L1M1 LINE L1 17 2144 -5421 2364 76 3 17 chr5 139240673 139240975 -63844557 + AluSg SINE Alu 1 298 -12 18916 153 47 5 chr5 139240975 139241483 -63844049 + L1M1 LINE L1 2144 2629 -4936 195 42 0 0 chr5 139241483 139241507 -63844025 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 18916 153 47 5 chr5 139241507 139242164 -63843368 + L1M1 LINE L1 2629 3545 -4020 2126 217 103 97 chr5 139242226 139243340 -63842192 + L1MD2 LINE L1 5225 6347 -12 2053 135 0 26 chr5 139243581 139243892 -63841640 + AluSx SINE Alu 1 303 -9 6368 91 20 12 chr5 139243896 139244897 -63840635 - L1PA7 LINE L1 -832 5314 4306 2569 66 8 36 chr5 139244899 139245034 -63840498 + L1PA7 LINE L1 5342 5479 -675 2661 30 3 0 chr5 139245034 139245339 -63840193 + AluY SINE Alu 1 306 -5 2569 66 8 36 chr5 139245339 139245567 -63839965 + L1PA7 LINE L1 5479 5695 -459 5055 56 4 3 chr5 139245567 139246691 -63838841 + MER11A LTR ERVK 1 1265 -1 3675 55 0 11 chr5 139246691 139247161 -63838371 + L1PA7 LINE L1 5689 6153 -1 25 83 0 0 chr5 139248885 139248945 -63836587 + AT_rich Low_complexity Low_complexity 1 60 0 901 233 91 32 chr5 139249083 139249336 -63836196 + MLT1H1 LTR MaLR 7 274 -281 255 211 113 0 chr5 139249441 139249512 -63836020 + MLT1H1 LTR MaLR 459 537 -18 2039 194 65 10 chr5 139249540 139249938 -63835594 - MSTB LTR MaLR -6 420 1 891 283 53 38 chr5 139250677 139251338 -63834194 + L1M1 LINE L1 3576 4246 -3319 767 274 59 29 chr5 139251424 139251950 -63833582 + L1M1 LINE L1 4281 4822 -2743 4252 315 30 27 chr5 139252000 139253644 -63831888 + L1MA9 LINE L1 402 2050 -5516 227 231 0 0 chr5 139253643 139253695 -63831837 + L1MA9 LINE L1 2444 2495 -5001 * 9121 225 46 44 chr5 139253708 139255322 -63830210 + L1MA9 LINE L1 2373 3981 -3671 2191 79 3 54 chr5 139255322 139255637 -63829895 - AluY SINE Alu -12 299 1 9121 225 46 44 chr5 139255637 139256845 -63828687 + L1MA9 LINE L1 3981 5184 -2468 2128 156 5 16 chr5 139256845 139256856 -63828676 + L1PB1 LINE L1 5782 5792 -359 378 0 0 0 chr5 139256856 139256898 -63828634 + (CA)n Simple_repeat Simple_repeat 2 43 0 2128 156 5 16 chr5 139256898 139257258 -63828274 + L1PB1 LINE L1 5792 6149 -2 9121 225 46 44 chr5 139257258 139257449 -63828083 + L1MA9 LINE L1 5184 5373 -2279 2188 112 7 0 chr5 139257449 139257752 -63827780 - AluY SINE Alu -6 305 1 9121 225 46 44 chr5 139257752 139259273 -63826259 + L1MA9 LINE L1 5373 6909 -743 641 114 0 0 chr5 139259278 139259366 -63826166 + L1PA6 LINE L1 11 98 -6048 * 33730 83 13 7 chr5 139259335 139264882 -63820650 + L1PA6 LINE L1 580 6152 -2 1847 222 74 23 chr5 139264892 139265193 -63820339 + L1MA9 LINE L1 6887 7226 -505 325 69 17 17 chr5 139265193 139265251 -63820281 + (TG)n Simple_repeat Simple_repeat 2 59 0 1847 222 74 23 chr5 139265251 139265462 -63820070 + L1MA9 LINE L1 7226 7425 -306 461 79 0 0 chr5 139265465 139265528 -63820004 + Tigger3(Golem) DNA MER2_type 2890 2952 -77 1208 219 122 85 chr5 139265708 139265821 -63819711 + L1ME3A LINE L1 5333 5440 -730 180 77 0 0 chr5 139265821 139265847 -63819685 + (TA)n Simple_repeat Simple_repeat 1 26 0 1208 219 122 85 chr5 139265847 139266308 -63819224 + L1ME3A LINE L1 5440 5928 -242 631 322 152 7 chr5 139266311 139266594 -63818938 + LTR16A LTR ERVL 4 327 -123 456 182 220 8 chr5 139266715 139266847 -63818685 + L1ME3A LINE L1 6006 6165 -5 31 26 0 0 chr5 139266870 139266908 -63818624 + AT_rich Low_complexity Low_complexity 1 38 0 219 254 30 15 chr5 139266945 139267012 -63818520 + MIR SINE MIR 72 139 -69 349 324 17 46 chr5 139267053 139267226 -63818306 - MIR SINE MIR -56 206 39 198 0 0 0 chr5 139267581 139267603 -63817929 + (GA)n Simple_repeat Simple_repeat 2 23 0 1999 137 0 24 chr5 139268412 139268704 -63816828 + AluSx SINE Alu 3 287 -25 2108 140 15 108 chr5 139269982 139270445 -63815087 + MSTB LTR MaLR 5 424 -2 944 261 21 39 chr5 139271489 139271826 -63813706 - MER46C DNA MER2_type 0 338 8 280 246 198 8 chr5 139272887 139273013 -63812519 - MLT1J LTR MaLR -38 473 324 379 235 24 0 chr5 139273132 139273217 -63812315 - MLT1J LTR MaLR -369 142 56 350 197 66 0 chr5 139273218 139273294 -63812238 - MER57A LTR ERV1 0 403 323 4477 143 79 4 chr5 139273343 139274111 -63811421 - LTR1B LTR ERV1 0 826 1 502 303 65 34 chr5 139274134 139274485 -63811047 + MER57A LTR ERV1 68 403 0 311 242 0 0 chr5 139274504 139274566 -63810966 + MLT1J LTR MaLR 81 142 -369 1871 152 25 9 chr5 139274659 139274975 -63810557 - LTR1B LTR ERV1 -113 713 393 846 197 11 11 chr5 139274984 139275167 -63810365 - L1 LINE L1 -1216 4930 4748 5352 159 20 30 chr5 139275167 139276239 -63809293 + L1 LINE L1 3674 4735 -1411 265 269 92 17 chr5 139277526 139277645 -63807887 + MIR SINE MIR 85 212 -50 278 133 44 0 chr5 139279059 139279104 -63806428 - L2 LINE L2 0 3313 3267 1016 245 190 27 chr5 139279289 139279841 -63805691 + HAL1 LINE L1 591 1232 -1275 443 247 129 24 chr5 139279848 139280103 -63805429 + HAL1 LINE L1 1251 1532 -975 566 262 24 6 chr5 139280148 139280312 -63805220 + MER58B DNA MER1_type 174 340 -1 1408 288 58 32 chr5 139280314 139281033 -63804499 + HAL1 LINE L1 1536 2273 -234 383 278 166 7 chr5 139282554 139282789 -63802743 - L1M4 LINE L1 -1037 5109 4820 333 0 0 0 chr5 139282789 139282826 -63802706 + (CA)n Simple_repeat Simple_repeat 2 38 0 383 278 166 7 chr5 139282826 139282874 -63802658 - L1M4 LINE L1 -1326 4820 4781 402 255 48 7 chr5 139282908 139283053 -63802479 - L1M4 LINE L1 -1301 4845 4695 33460 38 3 1 chr5 139283068 139287958 -63797574 - L1PA4 LINE L1 -3 6152 1251 380 247 0 44 chr5 139288142 139288472 -63797060 + (TA)n Simple_repeat Simple_repeat 1 315 0 197 109 31 115 chr5 139288614 139288806 -63796726 + (TA)n Simple_repeat Simple_repeat 2 177 0 368 163 28 28 chr5 139288844 139289022 -63796510 + (TA)n Simple_repeat Simple_repeat 2 179 0 236 184 30 30 chr5 139289060 139289228 -63796304 + (TA)n Simple_repeat Simple_repeat 2 169 0 250 261 11 22 chr5 139289255 139289347 -63796185 - L1MDa LINE L1 -6425 115 25 267 302 50 66 chr5 139289868 139290050 -63795482 - LTR16C LTR ERVL -14 477 299 296 184 46 46 chr5 139290365 139290452 -63795080 + LTR67 LTR ERVL 471 557 0 754 246 68 5 chr5 139291139 139291346 -63794186 - L1ME3A LINE L1 -12 6158 5939 349 173 53 13 chr5 139291384 139291459 -63794073 - L1ME2 LINE L1 -11 6153 6076 26 0 0 0 chr5 139291485 139291511 -63794021 + AT_rich Low_complexity Low_complexity 1 26 0 268 370 11 22 chr5 139291926 139292107 -63793425 - LTR16C LTR ERVL -14 477 299 1831 244 70 13 chr5 139292215 139292814 -63792718 - L1ME2 LINE L1 -126 6038 5406 544 234 115 27 chr5 139292810 139293071 -63792461 - L1ME2 LINE L1 -982 5164 4881 * 439 278 1 71 chr5 139293123 139293372 -63792160 + L1M4 LINE L1 3520 3755 -2391 2201 141 88 5 chr5 139293410 139293786 -63791746 + MSTA LTR MaLR 22 428 0 652 249 42 10 chr5 139293789 139293982 -63791550 + L1M4 LINE L1 3754 3952 -2194 1601 170 41 3 chr5 139293985 139294279 -63791253 - MSTA LTR MaLR 0 428 124 6078 184 17 23 chr5 139294281 139295429 -63790103 - MSTA-int LTR MaLR -509 1142 1 2273 179 35 2 chr5 139295429 139295825 -63789707 - MSTA LTR MaLR 0 428 20 1322 236 95 47 chr5 139295849 139295920 -63789612 + L1M4 LINE L1 3956 4022 -2124 2166 113 0 7 chr5 139295920 139296229 -63789303 + AluSg1 SINE Alu 3 309 0 1322 236 95 47 chr5 139296229 139296882 -63788650 + L1M4 LINE L1 4022 4715 -1431 * 9826 63 1 0 chr5 139296880 139298109 -63787423 + L1P LINE L1 1 1230 -4916 278 218 10 69 chr5 139298328 139298429 -63787103 + L1MDa LINE L1 339 433 -6107 698 184 0 0 chr5 139298738 139298847 -63786685 + FRAM SINE Alu 36 144 -32 201 195 0 0 chr5 139298851 139298892 -63786640 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 26 50 0 0 chr5 139299175 139299215 -63786317 + AT_rich Low_complexity Low_complexity 1 40 0 12084 193 108 8 chr5 139299252 139301889 -63783643 - L1 LINE L1 -3939 2909 7 5528 138 17 11 chr5 139301898 139302735 -63782797 + HSMAR2 DNA Mariner 399 1243 -59 949 70 0 0 chr5 139302735 139302863 -63782669 - L1PA4 LINE L1 0 6155 6028 5528 138 17 11 chr5 139302863 139302923 -63782609 + HSMAR2 DNA Mariner 1243 1301 -1 273 307 66 22 chr5 139303067 139303204 -63782328 - MIR SINE MIR -56 206 64 1763 168 3 14 chr5 139303583 139303874 -63781658 + AluJb SINE Alu 3 290 -22 555 186 64 14 chr5 139304586 139304726 -63780806 + L1MD3 LINE L1 7767 7913 -82 * 19115 161 25 18 chr5 139304713 139309308 -63776224 + L1P3 LINE L1 4 4695 -1766 1293 179 150 42 chr5 139309408 139309721 -63775811 - LTR1B LTR ERV1 -479 347 1 1732 241 158 20 chr5 139310289 139310397 -63775135 + Charlie7 DNA MER1_type 1482 1574 -1038 1183 201 136 16 chr5 139310397 139310720 -63774812 + MLT1A1 LTR MaLR 1 362 -3 1732 241 158 20 chr5 139310720 139311520 -63774012 + Charlie7 DNA MER1_type 1574 2516 -96 25 0 0 0 chr5 139312422 139312447 -63773085 + AT_rich Low_complexity Low_complexity 1 25 0 197 372 11 11 chr5 139316100 139316194 -63769338 + L3b LINE CR1 1243 1336 -247 2257 102 3 0 chr5 139316892 139317185 -63768347 + AluSc SINE Alu 1 294 -15 1244 148 181 0 chr5 139317318 139317561 -63767971 + Tigger1 DNA MER2_type 1 287 -2131 1134 124 7 10 chr5 139317562 139317853 -63767679 - THE1C LTR MaLR -2 373 1 * 13632 121 24 7 chr5 139317853 139319950 -63765582 + Tigger1 DNA MER2_type 284 2418 0 395 315 58 70 chr5 139320103 139320344 -63765188 + MIR SINE MIR 7 244 -18 25 65 0 0 chr5 139320611 139320657 -63764875 + AT_rich Low_complexity Low_complexity 1 46 0 220 284 110 55 chr5 139321121 139321248 -63764284 + L2 LINE L2 3179 3312 -1 322 276 35 0 chr5 139321444 139321531 -63764001 + L2 LINE L2 3183 3272 0 188 286 95 24 chr5 139322242 139322326 -63763206 - MIR SINE MIR 0 262 173 585 219 238 0 chr5 139322425 139322589 -63762943 - MER20 DNA MER1_type 0 219 17 357 387 34 0 chr5 139323400 139323635 -63761897 + ERVL LTR ERVL 2678 2920 -2844 1033 347 70 20 chr5 139323690 139324442 -63761090 + ERVL LTR ERVL 2981 3770 -1884 861 320 92 11 chr5 139324443 139324959 -63760573 - L1ME1 LINE L1 -1 6183 5584 302 299 104 37 chr5 139325279 139325443 -63760089 + ERVL LTR ERVL 4156 4330 -1434 289 311 38 9 chr5 139325648 139325754 -63759778 + ERVL LTR ERVL 4669 4777 -987 1998 145 47 44 chr5 139325768 139325909 -63759623 + MLT1B LTR MaLR 3 142 -248 1880 199 28 6 chr5 139325909 139326265 -63759267 + MLT1A1 LTR MaLR 1 364 -1 1998 145 47 44 chr5 139326265 139326510 -63759022 + MLT1B LTR MaLR 142 390 0 319 264 67 43 chr5 139327219 139327427 -63758105 - L1ME LINE L1 -318 5803 5591 1842 169 103 10 chr5 139327465 139327862 -63757670 + MER61C LTR ERV1 14 431 -3 21 36 0 0 chr5 139327912 139327940 -63757592 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 139330243 139330265 -63755267 + AT_rich Low_complexity Low_complexity 1 22 0 457 247 12 53 chr5 139330776 139330946 -63754586 - L1ME2 LINE L1 -49 6115 5953 2363 88 8 72 chr5 139330953 139331330 -63754202 + THE1A LTR MaLR 2 354 -1 11216 110 4 2 chr5 139331331 139332908 -63752624 + THE1A-int LTR MaLR 1 1580 0 1342 86 0 45 chr5 139332910 139333108 -63752424 + THE1A LTR MaLR 3 191 -164 1416 92 0 14 chr5 139333108 139333315 -63752217 - THE1A-int LTR MaLR -1375 205 2 1141 78 20 0 chr5 139333316 139333469 -63752063 - THE1A LTR MaLR 0 355 200 653 344 42 0 chr5 139333750 139334009 -63751523 + L2 LINE L2 2533 2802 -512 2756 156 42 18 chr5 139334009 139334555 -63750977 - MER89 LTR ERV1 0 559 1 436 326 91 36 chr5 139334655 139334962 -63750570 + L2 LINE L2 2986 3309 -4 504 280 83 51 chr5 139337072 139337447 -63748085 + HAL1 LINE L1 1406 1792 -715 25 83 0 0 chr5 139338189 139338249 -63747283 + AT_rich Low_complexity Low_complexity 1 60 0 381 275 73 81 chr5 139338586 139338701 -63746831 + LTR16C LTR ERVL 247 361 -130 2220 106 0 10 chr5 139338701 139339012 -63746520 - AluSp SINE Alu -5 308 1 381 275 73 81 chr5 139339012 139339143 -63746389 + LTR16C LTR ERVL 361 491 0 327 336 8 23 chr5 139339641 139339769 -63745763 + MIR3 SINE MIR 14 139 -69 498 318 36 62 chr5 139340134 139340439 -63745093 + MER102b DNA MER1_type 36 332 -9 3211 179 109 21 chr5 139341395 139342154 -63743378 - LTR1B LTR ERV1 0 826 1 195 69 0 0 chr5 139342166 139342195 -63743337 + (CA)n Simple_repeat Simple_repeat 1 29 0 542 265 68 19 chr5 139344755 139344917 -63740615 - MIR SINE MIR -65 197 28 5331 97 2 30 chr5 139345740 139346537 -63738995 - L1PB1 LINE L1 -1 6150 5376 745 278 102 32 chr5 139346603 139347030 -63738502 - MLT1J LTR MaLR -2 470 1 1974 84 34 90 chr5 139347493 139347816 -63737716 + AluSp SINE Alu 1 305 -8 24 32 0 0 chr5 139348535 139348566 -63736966 + AT_rich Low_complexity Low_complexity 1 31 0 542 265 68 19 chr5 139399626 139399788 -63685744 - MIR SINE MIR -65 197 28 5331 97 2 30 chr5 139400611 139401408 -63684124 - L1PB1 LINE L1 -1 6150 5376 745 278 102 32 chr5 139401474 139401901 -63683631 - MLT1J LTR MaLR -2 470 1 1944 84 34 90 chr5 139402364 139402686 -63682846 + AluSp SINE Alu 1 304 -9 24 32 0 0 chr5 139403405 139403436 -63682096 + AT_rich Low_complexity Low_complexity 1 31 0 278 133 44 0 chr5 139404134 139404179 -63681353 - L2 LINE L2 0 3313 3267 1016 245 190 27 chr5 139404364 139404916 -63680616 + HAL1 LINE L1 591 1232 -1275 443 247 129 24 chr5 139404923 139405178 -63680354 + HAL1 LINE L1 1251 1532 -975 566 262 24 6 chr5 139405223 139405387 -63680145 + MER58B DNA MER1_type 174 340 -1 1408 288 58 32 chr5 139405389 139406108 -63679424 + HAL1 LINE L1 1536 2273 -234 445 303 96 5 chr5 139407569 139407757 -63677775 - MIR SINE MIR -2 260 56 2926 184 151 25 chr5 139407990 139408723 -63676809 - LTR1B LTR ERV1 0 826 1 1732 241 158 20 chr5 139409291 139409399 -63676133 + Charlie7 DNA MER1_type 1482 1574 -1038 1183 201 136 16 chr5 139409399 139409722 -63675810 + MLT1A1 LTR MaLR 1 362 -3 1732 241 158 20 chr5 139409722 139410522 -63675010 + Charlie7 DNA MER1_type 1574 2516 -96 25 0 0 0 chr5 139411424 139411449 -63674083 + AT_rich Low_complexity Low_complexity 1 25 0 197 372 11 11 chr5 139415101 139415195 -63670337 + L3b LINE CR1 1243 1336 -247 2257 102 3 0 chr5 139415893 139416186 -63669346 + AluSc SINE Alu 1 294 -15 1244 148 181 0 chr5 139416319 139416562 -63668970 + Tigger1 DNA MER2_type 1 287 -2131 1134 124 7 10 chr5 139416563 139416854 -63668678 - THE1C LTR MaLR -2 373 1 * 13632 121 24 7 chr5 139416854 139418951 -63666581 + Tigger1 DNA MER2_type 284 2418 0 395 315 58 70 chr5 139419104 139419345 -63666187 + MIR SINE MIR 7 244 -18 25 65 0 0 chr5 139419612 139419658 -63665874 + AT_rich Low_complexity Low_complexity 1 46 0 220 284 110 55 chr5 139420122 139420249 -63665283 + L2 LINE L2 3179 3312 -1 322 276 35 0 chr5 139420445 139420532 -63665000 + L2 LINE L2 3183 3272 0 188 286 95 24 chr5 139421243 139421327 -63664205 - MIR SINE MIR 0 262 173 585 219 238 0 chr5 139421426 139421590 -63663942 - MER20 DNA MER1_type 0 219 17 383 278 166 7 chr5 139422528 139422763 -63662769 - L1M4 LINE L1 -1037 5109 4820 423 0 0 0 chr5 139422763 139422810 -63662722 + (CA)n Simple_repeat Simple_repeat 2 48 0 383 278 166 7 chr5 139422810 139422858 -63662674 - L1M4 LINE L1 -1326 4820 4781 402 255 48 7 chr5 139422892 139423037 -63662495 - L1M4 LINE L1 -1301 4845 4695 44009 42 2 1 chr5 139423052 139429195 -63656337 - L1PA4 LINE L1 -3 6152 1 1322 236 95 47 chr5 139429193 139429846 -63655686 - L1M4 LINE L1 -1431 4715 4022 * 2166 113 0 7 chr5 139429846 139430155 -63655377 - AluSg1 SINE Alu 0 309 3 1322 236 95 47 chr5 139430155 139430226 -63655306 - L1M4 LINE L1 -2124 4022 3956 2273 179 35 2 chr5 139430250 139430646 -63654886 + MSTA LTR MaLR 20 428 0 6148 181 16 23 chr5 139430646 139431795 -63653737 + MSTA-int LTR MaLR 1 1142 -509 1601 170 41 3 chr5 139431797 139432091 -63653441 + MSTA LTR MaLR 124 428 0 652 249 42 10 chr5 139432094 139432287 -63653245 - L1M4 LINE L1 -2194 3952 3754 2201 141 88 5 chr5 139432290 139432666 -63652866 - MSTA LTR MaLR 0 428 22 439 278 1 71 chr5 139432704 139432953 -63652579 - L1M4 LINE L1 -2391 3755 3520 544 234 115 27 chr5 139433005 139433266 -63652266 + L1ME2 LINE L1 4881 5164 -982 * 1831 244 70 13 chr5 139433262 139433861 -63651671 + L1ME2 LINE L1 5406 6038 -126 268 370 11 22 chr5 139433969 139434150 -63651382 + LTR16C LTR ERVL 299 477 -14 26 0 0 0 chr5 139434566 139434592 -63650940 + AT_rich Low_complexity Low_complexity 1 26 0 349 173 53 13 chr5 139434618 139434693 -63650839 + L1ME2 LINE L1 6076 6153 -11 754 246 68 5 chr5 139434731 139434938 -63650594 + L1ME3A LINE L1 5939 6158 -12 296 184 46 46 chr5 139435625 139435712 -63649820 - LTR67 LTR ERVL 0 557 471 267 302 50 66 chr5 139436027 139436209 -63649323 + LTR16C LTR ERVL 299 477 -14 259 261 11 22 chr5 139436730 139436822 -63648710 + L1MDa LINE L1 25 115 -6425 308 139 29 71 chr5 139436849 139437386 -63648146 + (TA)n Simple_repeat Simple_repeat 1 514 0 367 242 12 17 chr5 139437397 139437837 -63647695 + (TA)n Simple_repeat Simple_repeat 1 437 0 206 358 0 12 chr5 139437875 139438040 -63647492 + (CATATA)n Simple_repeat Simple_repeat 6 168 0 * 389 257 0 43 chr5 139437927 139438114 -63647418 + (TA)n Simple_repeat Simple_repeat 2 180 0 238 209 11 77 chr5 139438051 139438233 -63647299 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 * 708 233 43 114 chr5 139438235 139438604 -63646928 + L1MDa LINE L1 91 433 -6107 698 184 0 0 chr5 139438913 139439022 -63646510 + FRAM SINE Alu 36 144 -32 201 195 0 0 chr5 139439026 139439067 -63646465 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 26 50 0 0 chr5 139439350 139439390 -63646142 + AT_rich Low_complexity Low_complexity 1 40 0 12084 193 108 8 chr5 139439427 139442064 -63643468 - L1 LINE L1 -3939 2909 7 5528 138 17 11 chr5 139442073 139442910 -63642622 + HSMAR2 DNA Mariner 399 1243 -59 949 70 0 0 chr5 139442910 139443038 -63642494 - L1PA4 LINE L1 0 6155 6028 5528 138 17 11 chr5 139443038 139443098 -63642434 + HSMAR2 DNA Mariner 1243 1301 -1 273 307 66 22 chr5 139443242 139443379 -63642153 - MIR SINE MIR -56 206 64 1763 168 3 14 chr5 139443758 139444049 -63641483 + AluJb SINE Alu 3 290 -22 555 186 64 14 chr5 139444761 139444901 -63640631 + L1MD3 LINE L1 7767 7913 -82 * 12782 143 21 13 chr5 139444888 139451244 -63634288 + L1PA8 LINE L1 4 6484 -3 479 169 45 0 chr5 139451244 139451333 -63634199 + L1MD3 LINE L1 7892 7984 -11 711 273 74 29 chr5 139451774 139452120 -63633412 - MLT1K LTR MaLR -22 566 141 330 85 0 0 chr5 139454003 139454050 -63631482 - FAM SINE Alu -4 171 125 274 184 0 0 chr5 139454072 139454121 -63631411 + MLT1L LTR MaLR 565 613 -2 397 325 120 26 chr5 139454146 139454613 -63630919 - MLT1J LTR MaLR 0 511 1 430 247 39 26 chr5 139454615 139454769 -63630763 + L2 LINE L2 2233 2388 -926 1060 216 28 65 chr5 139454769 139455192 -63630340 + MLT2B1 LTR ERVL 1 451 -13 835 311 76 60 chr5 139455199 139455749 -63629783 + L2 LINE L2 2359 2917 -397 345 300 61 48 chr5 139455819 139456049 -63629483 + L2 LINE L2 3077 3309 -4 503 273 106 0 chr5 139456051 139456212 -63629320 - L2 LINE L2 0 3313 3136 247 241 165 38 chr5 139457136 139457269 -63628263 - MIR SINE MIR -2 260 111 320 314 48 16 chr5 139457605 139457729 -63627803 + L2 LINE L2 3145 3272 0 424 228 0 18 chr5 139457803 139457917 -63627615 + MER117 DNA MER1_type 4 115 -82 1300 215 58 13 chr5 139458754 139459248 -63626284 + L1ME2 LINE L1 5089 5603 -563 * 4170 167 24 38 chr5 139459247 139459777 -63625755 + L1MB7 LINE L1 5092 5628 -556 1618 175 57 73 chr5 139459777 139460216 -63625316 - MSTB1 LTR MaLR 0 432 1 4170 167 24 38 chr5 139460216 139460778 -63624754 + L1MB7 LINE L1 5628 6170 -14 1281 240 36 34 chr5 139460788 139461258 -63624274 + L1ME2 LINE L1 5612 6082 -82 1322 169 21 15 chr5 139461260 139461560 -63623972 + MER61B LTR ERV1 1 396 -29 323 198 0 22 chr5 139461560 139461651 -63623881 + L1MA9 LINE L1 6218 6306 -6 236 395 7 20 chr5 139463328 139463475 -63622057 - MIR SINE MIR -98 164 20 2698 105 19 5 chr5 139463645 139464064 -63621468 - MER57B LTR ERV1 -9 425 1 2352 116 0 0 chr5 139464628 139464939 -63620593 + AluSx SINE Alu 1 311 -1 785 301 10 5 chr5 139464976 139465182 -63620350 - MIR SINE MIR -36 226 20 237 247 22 135 chr5 139465976 139466065 -63619467 - L2 LINE L2 -8 3305 3227 21 0 0 0 chr5 139466120 139466141 -63619391 + AT_rich Low_complexity Low_complexity 1 21 0 190 279 90 18 chr5 139466221 139466332 -63619200 - MIR SINE MIR -20 242 124 1962 151 3 10 chr5 139468197 139468502 -63617030 + AluSx SINE Alu 1 303 -9 327 272 12 74 chr5 139469306 139469468 -63616064 + LTR67 LTR ERVL 364 515 -42 298 277 114 54 chr5 139469557 139469723 -63615809 - MIR3 SINE MIR -28 180 5 355 184 23 0 chr5 139470075 139470162 -63615370 + (TA)n Simple_repeat Simple_repeat 2 90 0 1414 50 0 0 chr5 139470169 139470351 -63615181 - L1PA7 LINE L1 -23 6131 5950 239 369 0 0 chr5 139474034 139474118 -63611414 - L2 LINE L2 -8 3264 3181 2049 114 4 0 chr5 139474475 139474755 -63610777 + AluSx SINE Alu 13 293 -19 4241 158 80 16 chr5 139475316 139476212 -63609320 + L1PB1 LINE L1 3 956 -5907 * 13235 181 22 26 chr5 139476210 139477617 -63607915 + L1PB1 LINE L1 1737 3148 -3719 1083 68 0 14 chr5 139477617 139477764 -63607768 + L1PA5 LINE L1 6001 6146 -8 13235 181 22 26 chr5 139477764 139481434 -63604098 + L1PB1 LINE L1 3148 6864 -3 924 225 22 27 chr5 139482149 139482542 -63602990 - MLT1A2 LTR MaLR -6 382 21 449 342 5 21 chr5 139483498 139483685 -63601847 + HAL1 LINE L1 1087 1270 -1237 285 244 0 0 chr5 139483743 139483821 -63601711 + HAL1 LINE L1 2077 2154 -353 388 236 30 109 chr5 139483864 139484029 -63601503 + HAL1b LINE L1 744 895 -453 356 310 92 55 chr5 139484096 139484422 -63601110 + HAL1 LINE L1 2169 2506 -1 703 245 110 5 chr5 139484894 139485094 -63600438 - MER58A DNA MER1_type -3 221 1 58 15 0 0 chr5 139485141 139485206 -63600326 + AT_rich Low_complexity Low_complexity 1 65 0 180 97 0 0 chr5 139486911 139486942 -63598590 + (A)n Simple_repeat Simple_repeat 1 31 0 313 333 50 13 chr5 139487505 139487664 -63597868 + MER5A DNA MER1_type 1 165 -24 7571 28 0 3 chr5 139487763 139488738 -63596794 + L1PA4 LINE L1 5182 6153 -2 380 329 6 24 chr5 139488795 139488959 -63596573 - MLT1H LTR MaLR -270 279 119 818 136 8 8 chr5 139489204 139489336 -63596196 + AluJ SINE Alu 1 132 -170 212 171 0 0 chr5 139489339 139489380 -63596152 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 374 0 38 chr5 139489859 139489990 -63595542 - L2 LINE L2 -204 3068 2943 998 151 16 38 chr5 139490338 139490523 -63595009 + AluJ SINE Alu 128 308 -4 835 239 42 15 chr5 139490538 139490797 -63594735 + L1MC5 LINE L1 5318 5583 -2225 346 230 50 0 chr5 139490847 139490947 -63594585 + L1MC5 LINE L1 7330 7434 -527 659 244 66 20 chr5 139490989 139491292 -63594240 + L1MC5 LINE L1 7609 7925 -36 4884 194 8 1 chr5 139491422 139492476 -63593056 + L1P LINE L1 4271 5331 -815 5970 174 9 16 chr5 139492477 139493633 -63591899 + L1PA15 LINE L1 3503 4651 -1495 2054 136 20 10 chr5 139493633 139493928 -63591604 + AluSx SINE Alu 1 298 -14 5970 174 9 16 chr5 139493928 139493996 -63591536 + L1PA15 LINE L1 4651 4718 -1428 900 243 33 43 chr5 139493996 139494297 -63591235 + pTR5 LTR ERV1 743 1040 -1398 2077 93 131 205 chr5 139494471 139495098 -63590434 + LTR12 LTR ERV1 1 579 -135 7549 106 19 14 chr5 139495098 139496909 -63588623 + HERV9 LTR ERV1 1 1911 -6488 * 21199 86 20 10 chr5 139496892 139502468 -63583064 + HERV9 LTR ERV1 504 8399 0 4597 103 85 70 chr5 139502656 139503468 -63582064 + LTR12 LTR ERV1 3 826 0 6297 84 21 1 chr5 139503468 139504883 -63580649 + L1PA14 LINE L1 4715 6161 0 4882 132 20 5 chr5 139504898 139505734 -63579798 + L1PA15 LINE L1 5317 6165 0 1367 80 10 0 chr5 139506243 139506444 -63579088 + L1PA14 LINE L1 5817 6019 -142 468 89 65 0 chr5 139506443 139506530 -63579002 - L1M1 LINE L1 -605 5556 5468 * 216 343 55 0 chr5 139507010 139507083 -63578449 - L2 LINE L2 -3 3310 3234 1082 206 82 62 chr5 139509208 139509500 -63576032 + AluJo SINE Alu 2 299 -3 2160 96 48 3 chr5 139509892 139510184 -63575348 + AluSq SINE Alu 1 305 -8 347 305 238 0 chr5 139510478 139510642 -63574890 - L3 LINE CR1 -40 1537 1335 242 200 153 0 chr5 139510635 139510720 -63574812 - L2 LINE L2 -99 3214 3117 * 180 263 0 0 chr5 139510837 139510875 -63574657 + L2 LINE L2 3215 3252 -20 22 0 0 0 chr5 139513696 139513718 -63571814 + AT_rich Low_complexity Low_complexity 1 22 0 205 314 153 8 chr5 139515855 139515973 -63569559 + L2 LINE L2 3138 3272 0 23 0 0 0 chr5 139516606 139516629 -63568903 + AT_rich Low_complexity Low_complexity 1 23 0 22 88 0 0 chr5 139517832 139517889 -63567643 + AT_rich Low_complexity Low_complexity 1 57 0 304 246 51 0 chr5 139517977 139518091 -63567441 + L1MC/D LINE L1 5678 5800 -321 2150 116 65 8 chr5 139518960 139519314 -63566218 - THE1C LTR MaLR -1 374 1 2254 99 0 3 chr5 139519333 139519627 -63565905 - AluSq SINE Alu -18 295 3 12998 60 8 0 chr5 139519747 139521539 -63563993 - L1P LINE L1 -2014 4132 2326 1870 80 16 0 chr5 139521539 139521788 -63563744 + L1PA6 LINE L1 5900 6154 0 237 303 73 18 chr5 139522364 139522473 -63563059 - MER5A DNA MER1_type -3 186 72 891 212 85 48 chr5 139523569 139523635 -63561897 - MLT1C LTR MaLR 0 467 405 2260 60 0 11 chr5 139523635 139523948 -63561584 + AluY SINE Alu 1 310 0 891 212 85 48 chr5 139523948 139524196 -63561336 - MLT1C LTR MaLR -62 405 140 1480 164 122 3 chr5 139524202 139524514 -63561018 + MER93b LTR ERV1 10 358 -15 614 181 29 14 chr5 139524524 139524662 -63560870 - MLT1C LTR MaLR -324 143 4 201 382 29 0 chr5 139526123 139526225 -63559307 + MIR SINE MIR 33 137 -71 23 54 0 0 chr5 139526261 139526298 -63559234 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 139526349 139526370 -63559162 + AT_rich Low_complexity Low_complexity 1 21 0 582 277 141 5 chr5 139527197 139527403 -63558129 - MIR SINE MIR -1 261 28 23 86 0 0 chr5 139527655 139527713 -63557819 + AT_rich Low_complexity Low_complexity 1 58 0 2358 105 0 0 chr5 139527800 139528106 -63557426 - AluSx SINE Alu -6 306 1 4039 113 17 0 chr5 139528174 139528620 -63556912 + LTR43 LTR ERV1 1 461 -141 204 40 0 0 chr5 139528620 139528645 -63556887 + (TG)n Simple_repeat Simple_repeat 2 26 0 4039 113 17 0 chr5 139528645 139528790 -63556742 + LTR43 LTR ERV1 461 602 0 1964 179 16 11 chr5 139528815 139529178 -63556354 - MLT1A1 LTR MaLR 0 365 1 694 184 108 0 chr5 139529999 139530184 -63555348 - LTR37A LTR ERV1 0 426 222 11351 181 53 86 chr5 139530214 139531899 -63553633 + L1MB4 LINE L1 819 2558 -4290 1481 162 90 23 chr5 139531899 139531997 -63553535 + AluSx SINE Alu 6 96 -216 2070 103 67 22 chr5 139531997 139532356 -63553176 + THE1C LTR MaLR 1 375 0 1481 162 90 23 chr5 139532356 139532523 -63553009 + AluSx SINE Alu 96 289 -23 11351 181 53 86 chr5 139532523 139535804 -63549728 + L1MB4 LINE L1 2558 5620 -1228 2177 130 0 7 chr5 139535804 139536112 -63549420 + AluSg SINE Alu 1 306 -4 11351 181 53 86 chr5 139536112 139536533 -63548999 + L1MB4 LINE L1 5620 6053 -795 305 283 86 27 chr5 139536585 139536763 -63548769 - MIR SINE MIR -65 143 9 21 36 0 0 chr5 139538175 139538203 -63547329 + AT_rich Low_complexity Low_complexity 1 28 0 396 59 0 0 chr5 139538203 139538254 -63547278 + (CA)n Simple_repeat Simple_repeat 2 52 0 890 257 66 51 chr5 139538629 139539549 -63545983 + MER52A LTR ERV1 275 1751 -4 2265 86 19 22 chr5 139541441 139541755 -63543777 + AluSp SINE Alu 1 313 0 3497 130 28 2 chr5 139541931 139542471 -63543061 - MER41A LTR ERV1 0 554 1 186 218 0 91 chr5 139542745 139542800 -63542732 + L2 LINE L2 3205 3254 -18 1392 206 25 76 chr5 139543579 139543700 -63541832 + L1MB4 LINE L1 6455 6581 -301 1853 170 0 0 chr5 139543700 139544023 -63541509 + AluSx SINE Alu 1 323 0 1392 206 25 76 chr5 139544023 139544333 -63541199 + L1MB4 LINE L1 6581 6865 -17 247 208 69 0 chr5 139544343 139544444 -63541088 + (TA)n Simple_repeat Simple_repeat 1 108 0 435 152 0 0 chr5 139546287 139546366 -63539166 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 1640 34 0 5 chr5 139546420 139546628 -63538904 - L1PA5 LINE L1 -21 6133 5927 1494 33 0 0 chr5 139546625 139546808 -63538724 + L1PA5 LINE L1 5715 5897 -257 * 353 265 129 8 chr5 139546808 139546940 -63538592 - MIR SINE MIR -100 162 15 1634 159 29 14 chr5 139547005 139547306 -63538226 - AluJb SINE Alu 0 305 1 6459 66 57 0 chr5 139549135 139550173 -63535359 - L1PA7 LINE L1 -11 6143 5086 870 173 0 37 chr5 139552054 139552216 -63533316 - FRAM SINE Alu -23 153 1 486 318 66 0 chr5 139552249 139552460 -63533072 - MIR SINE MIR -36 226 2 750 231 5 70 chr5 139553057 139553166 -63532366 - MER45A DNA AcHobo -1406 175 81 1822 184 27 19 chr5 139553166 139553535 -63531997 - THE1C LTR MaLR -2 373 2 750 231 5 70 chr5 139553535 139553611 -63531921 - MER45A DNA AcHobo -1500 81 2 297 272 183 41 chr5 139555480 139555649 -63529883 + MIR3 SINE MIR 7 199 -9 198 0 0 0 chr5 139556097 139556119 -63529413 + (A)n Simple_repeat Simple_repeat 1 22 0 2324 58 3 3 chr5 139556119 139556412 -63529120 + AluY SINE Alu 1 293 -18 496 296 53 29 chr5 139556412 139556618 -63528914 - MLT1K LTR MaLR -53 535 325 204 291 239 8 chr5 139556932 139557066 -63528466 + MIR3 SINE MIR 40 204 -4 1601 283 40 12 chr5 139559388 139559985 -63525547 + L1ME1 LINE L1 3230 3843 -2303 1330 228 199 40 chr5 139559981 139560308 -63525224 + L1ME1 LINE L1 5473 5747 -419 * 936 207 14 36 chr5 139560308 139560530 -63525002 - MER20 DNA MER1_type 0 219 3 1330 228 199 40 chr5 139560530 139560785 -63524747 + L1ME1 LINE L1 5747 6148 -18 2505 59 0 0 chr5 139560877 139561182 -63524350 + AluY SINE Alu 1 305 -6 3335 226 49 19 chr5 139561336 139562599 -63522933 + L1MB7 LINE L1 2088 3393 -2989 1361 237 66 0 chr5 139562607 139562987 -63522545 + L1MB7 LINE L1 3800 4204 -2178 2452 218 64 6 chr5 139562991 139563541 -63521991 + L1MB7 LINE L1 4393 4994 -1388 195 42 0 0 chr5 139563541 139563565 -63521967 + (CAGTA)n Simple_repeat Simple_repeat 4 27 0 2452 218 64 6 chr5 139563565 139563717 -63521815 + L1MB7 LINE L1 4994 5136 -1246 2309 171 63 11 chr5 139563703 139564165 -63521367 + L1MB7 LINE L1 5650 6135 -285 * 986 168 73 27 chr5 139564167 139564387 -63521145 + L1MB7 LINE L1 6191 6420 0 337 314 0 0 chr5 139564982 139565087 -63520445 - Charlie8 DNA MER1_type -2189 228 124 29585 60 9 2 chr5 139565167 139569871 -63515661 + L1PA4 LINE L1 1427 6154 -1 528 193 23 0 chr5 139569895 139569983 -63515549 - MER58A DNA MER1_type -16 91 2 925 265 26 13 chr5 139569984 139570293 -63515239 + L1MCc LINE L1 36 348 -6075 971 288 147 20 chr5 139570430 139570969 -63514563 + L1MCc LINE L1 836 1442 -4981 25 0 0 0 chr5 139571218 139571243 -63514289 + AT_rich Low_complexity Low_complexity 1 25 0 1311 221 164 14 chr5 139571467 139572027 -63513505 + MER114 LTR ERV 1 644 -4 195 42 0 0 chr5 139572192 139572216 -63513316 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1296 218 83 79 chr5 139572523 139572749 -63512783 - L1ME3A LINE L1 -7 6163 5939 1320 111 69 9 chr5 139572749 139572966 -63512566 + MER30 DNA MER1_type 1 230 0 1296 218 83 79 chr5 139572966 139573258 -63512274 - L1ME3A LINE L1 -231 5939 5643 23 0 0 0 chr5 139573430 139573453 -63512079 + AT_rich Low_complexity Low_complexity 1 23 0 805 145 16 8 chr5 139574662 139574786 -63510746 + AluJo SINE Alu 11 135 -177 2560 56 0 3 chr5 139574937 139575243 -63510289 - AluY SINE Alu -6 305 1 1447 205 3 34 chr5 139575250 139575548 -63509984 - AluJo SINE Alu -13 289 1 23 0 0 0 chr5 139575961 139575984 -63509548 + AT_rich Low_complexity Low_complexity 1 23 0 8919 135 22 6 chr5 139576679 139579012 -63506520 + L1PA10 LINE L1 3786 6165 -3 212 298 111 40 chr5 139579227 139579425 -63506107 + L2 LINE L2 2816 3027 -245 11580 160 49 8 chr5 139579577 139582933 -63502599 + L1MA2 LINE L1 2808 6304 0 325 219 161 44 chr5 139582936 139583073 -63502459 - MIR SINE MIR 0 262 110 433 222 33 0 chr5 139583096 139583186 -63502346 + MER81 DNA DNA 4 96 -18 2269 159 79 25 chr5 139583393 139583872 -63501660 + LTR22 LTR ERVK 1 505 -4 458 220 187 0 chr5 139584408 139584558 -63500974 + MER5B DNA MER1_type 1 178 0 670 219 59 32 chr5 139584704 139584891 -63500641 + L1 LINE L1 4884 5075 -1071 4045 110 10 11 chr5 139586737 139587348 -63498184 - MER4B LTR ERV1 0 610 1 571 303 66 41 chr5 139587889 139588133 -63497399 - MIR SINE MIR 0 262 13 21 0 0 0 chr5 139588870 139588891 -63496641 + AT_rich Low_complexity Low_complexity 1 21 0 279 261 84 50 chr5 139589070 139589189 -63496343 - L2 LINE L2 -4 3309 3187 356 310 30 5 chr5 139590752 139590901 -63494631 + MIR SINE MIR 15 170 -69 243 232 0 0 chr5 139590916 139590972 -63494560 + L1ME3 LINE L1 5957 6012 -150 5344 102 32 1 chr5 139593267 139595044 -63490488 - L1PA14 LINE L1 -2 6159 4309 2121 118 0 3 chr5 139596846 139597133 -63488399 - AluSg SINE Alu -19 291 6 706 246 69 0 chr5 139599028 139599203 -63486329 - MLT1F1 LTR MaLR -369 198 12 291 193 97 40 chr5 139599257 139599433 -63486099 - Charlie7 DNA MER1_type 0 2612 2427 * 361 247 41 0 chr5 139599423 139599520 -63486012 - Charlie7 DNA MER1_type -2511 101 1 1799 269 77 11 chr5 139599798 139600464 -63485068 + L1MC4a LINE L1 5284 5993 -1815 329 295 28 0 chr5 139600660 139600782 -63484750 - MIR SINE MIR -37 171 42 381 204 263 32 chr5 139602776 139602962 -63482570 + MIR SINE MIR 29 257 -5 435 211 21 13 chr5 139604279 139604408 -63481124 + L1MA7 LINE L1 5979 6094 -197 375 294 119 28 chr5 139604427 139604604 -63480928 + MIR SINE MIR 24 216 -46 842 169 69 26 chr5 139604615 139604804 -63480728 + L1PB4 LINE L1 5959 6155 -1 424 105 85 175 chr5 139604809 139604933 -63480599 + L1MA7 LINE L1 6106 6207 -84 1976 149 13 0 chr5 139604933 139605234 -63480298 - AluSx SINE Alu -7 305 1 424 105 85 175 chr5 139605234 139605309 -63480223 + L1MA7 LINE L1 6207 6287 -4 1932 136 0 0 chr5 139606486 139606743 -63478789 + AluSg SINE Alu 1 257 -53 23 0 0 0 chr5 139608033 139608056 -63477476 + AT_rich Low_complexity Low_complexity 1 23 0 243 188 0 0 chr5 139610231 139610279 -63475253 + A-rich Low_complexity Low_complexity 1 48 0 1616 191 39 17 chr5 139610848 139611203 -63474329 + MLT1A1 LTR MaLR 1 363 -2 762 174 169 38 chr5 139611309 139611493 -63474039 + MER3 DNA MER1_type 2 209 0 247 246 222 40 chr5 139611725 139611851 -63473681 + MIR3 SINE MIR 41 189 -19 372 253 53 0 chr5 139611897 139611992 -63473540 - MER102b DNA MER1_type 0 341 242 1069 218 107 0 chr5 139613414 139613722 -63471810 - MLT1A1 LTR MaLR -24 341 1 25 65 0 0 chr5 139614068 139614114 -63471418 + AT_rich Low_complexity Low_complexity 1 46 0 394 265 65 27 chr5 139614650 139614835 -63470697 + L1ME LINE L1 5620 5811 -310 777 281 19 5 chr5 139616747 139616957 -63468575 + MIR SINE MIR 18 230 -32 1921 123 14 7 chr5 139617441 139617717 -63467815 + AluSx SINE Alu 1 278 -34 294 50 0 0 chr5 139617728 139617768 -63467764 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 26 30 0 0 chr5 139619726 139619759 -63465773 + AT_rich Low_complexity Low_complexity 1 33 0 191 273 91 36 chr5 139619975 139620085 -63465447 - L3b LINE CR1 -343 1240 1125 1865 158 11 0 chr5 139620178 139620463 -63465069 - AluSx SINE Alu -24 288 1 233 399 65 8 chr5 139620785 139620999 -63464533 + L2 LINE L2 2607 2850 -464 1822 162 0 0 chr5 139620999 139621270 -63464262 - AluJb SINE Alu -33 279 9 233 399 65 8 chr5 139621270 139621406 -63464126 + L2 LINE L2 2850 2977 -337 850 240 96 10 chr5 139622685 139622997 -63462535 - L1ME3A LINE L1 -34 6136 5798 605 130 0 0 chr5 139623188 139623288 -63462244 + L1MA7 LINE L1 6180 6279 -12 2508 48 10 0 chr5 139623617 139623910 -63461622 + AluY SINE Alu 1 296 -15 592 263 54 24 chr5 139624601 139624843 -63460689 + MLT1H LTR MaLR 11 302 -247 1054 161 179 62 chr5 139624866 139625219 -63460313 - MSTD LTR MaLR 0 396 3 326 210 212 0 chr5 139625269 139625376 -63460156 + MLT1G1 LTR MaLR 423 594 -1 1095 246 106 10 chr5 139626321 139626488 -63459044 + L1MC4a LINE L1 7282 7432 -376 207 0 0 0 chr5 139626488 139626511 -63459021 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1095 246 106 10 chr5 139626511 139626730 -63458802 + L1MC4a LINE L1 7432 7705 -103 433 239 99 49 chr5 139627151 139627293 -63458239 + MER5A DNA MER1_type 39 187 -2 877 185 182 76 chr5 139628092 139628422 -63457110 - MLT1A1 LTR MaLR 0 365 1 976 311 181 24 chr5 139628427 139629219 -63456313 - L2 LINE L2 -13 3300 2315 2103 155 23 0 chr5 139629219 139629573 -63455959 - THE1B LTR MaLR -2 362 1 976 311 181 24 chr5 139629573 139629791 -63455741 - L2 LINE L2 -998 2315 2132 911 149 7 0 chr5 139629843 139629984 -63455548 - FRAM SINE Alu -6 170 29 258 293 113 0 chr5 139630025 139630131 -63455401 + MIR SINE MIR 131 248 -14 359 265 12 0 chr5 139630466 139630549 -63454983 - MIR3 SINE MIR -48 160 77 195 292 58 58 chr5 139631128 139631248 -63454284 - MIR SINE MIR -107 155 36 801 267 205 33 chr5 139631728 139632158 -63453374 - MLT1H LTR MaLR -5 544 41 1884 134 95 0 chr5 139632238 139632521 -63453011 + AluSx SINE Alu 1 310 -2 349 333 68 55 chr5 139634619 139634838 -63450694 + MIR SINE MIR 28 249 -13 238 271 82 0 chr5 139635119 139635204 -63450328 + MIR SINE MIR 74 165 -97 3877 163 64 46 chr5 139635916 139637254 -63448278 + L1MB7 LINE L1 4820 6184 0 578 282 92 0 chr5 139637324 139637519 -63448013 - MIR SINE MIR -10 252 40 180 234 191 0 chr5 139637873 139637920 -63447612 + MIR SINE MIR 37 92 -116 406 192 16 26 chr5 139638397 139638536 -63446996 + L1MB3 LINE L1 6018 6162 -21 654 262 64 25 chr5 139638795 139638997 -63446535 - MER63A DNA MER1_type 0 210 1 448 316 107 14 chr5 139639744 139639959 -63445573 - MIR SINE MIR -13 249 15 2392 90 0 7 chr5 139640094 139640404 -63445128 - AluSx SINE Alu -4 308 1 438 127 0 0 chr5 139640680 139640751 -63444781 + (GGA)n Simple_repeat Simple_repeat 1 71 0 222 37 0 0 chr5 139640990 139641017 -63444515 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 2250 54 0 0 chr5 139641022 139641298 -63444234 - AluY SINE Alu -35 276 1 25 51 0 0 chr5 139641357 139641396 -63444136 + AT_rich Low_complexity Low_complexity 1 39 0 333 0 0 0 chr5 139642518 139642555 -63442977 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 357 253 13 0 chr5 139643347 139643426 -63442106 + MER81 DNA DNA 1 80 -34 32 0 0 0 chr5 139645187 139645219 -63440313 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 139645988 139646011 -63439521 + AT_rich Low_complexity Low_complexity 1 23 0 217 258 0 53 chr5 139646144 139646295 -63439237 + (TTAAA)n Simple_repeat Simple_repeat 3 145 0 653 291 112 23 chr5 139646731 139647252 -63438280 - L2 LINE L2 -2 3311 2685 370 274 143 26 chr5 139647260 139647624 -63437908 - L1MC/D LINE L1 -507 5657 5341 367 327 103 18 chr5 139647783 139648064 -63437468 - L1MC/D LINE L1 -982 5164 4860 1045 289 99 22 chr5 139648069 139648616 -63436916 - L1MC/D LINE L1 -1376 4770 4160 2428 66 0 7 chr5 139648616 139648917 -63436615 - AluY SINE Alu -12 299 1 1045 289 99 22 chr5 139648917 139649044 -63436488 - L1MC/D LINE L1 -1986 4160 4044 3524 224 57 51 chr5 139650592 139651799 -63433733 + MER69B DNA AcHobo 10 1223 -3 8210 157 4 1 chr5 139652157 139654658 -63430874 - L1PB1 LINE L1 0 6867 4357 * 10539 102 53 6 chr5 139654651 139656370 -63429162 - L1PB1 LINE L1 -3714 3148 1349 375 267 20 0 chr5 139656940 139657041 -63428491 + MARNA DNA Mariner 248 350 -236 203 273 114 34 chr5 139658194 139658282 -63427250 + L2 LINE L2 3178 3272 0 607 234 7 14 chr5 139659632 139659777 -63425755 - MLT1F1 LTR MaLR -3 564 421 309 189 14 14 chr5 139659772 139659846 -63425686 - MLT1F LTR MaLR -468 74 1 * 493 318 52 23 chr5 139659888 139660061 -63425471 + MIR SINE MIR 20 197 -65 21 0 0 0 chr5 139660429 139660450 -63425082 + AT_rich Low_complexity Low_complexity 1 21 0 195 146 0 0 chr5 139660789 139660830 -63424702 + (TA)n Simple_repeat Simple_repeat 2 42 0 558 263 44 6 chr5 139661140 139661300 -63424232 + MER69A DNA AcHobo 10 175 -2 1939 173 0 0 chr5 139661337 139661637 -63423895 + AluJb SINE Alu 1 300 -12 790 198 6 0 chr5 139662108 139662265 -63423267 + L1PB4 LINE L1 5999 6156 0 619 244 176 14 chr5 139662321 139662542 -63422990 + MIR SINE MIR 3 259 -3 2214 126 0 0 chr5 139662913 139663206 -63422326 + AluSx SINE Alu 2 294 -18 569 277 115 13 chr5 139663984 139664219 -63421313 - MIR SINE MIR -1 261 3 1567 102 93 0 chr5 139664362 139664587 -63420945 + AluSx SINE Alu 58 303 -9 230 194 45 75 chr5 139664627 139664694 -63420838 + L1M4 LINE L1 5656 5720 -458 2177 170 103 19 chr5 139664697 139665180 -63420352 + L1MB7 LINE L1 5656 6179 -5 1281 242 54 22 chr5 139665451 139665846 -63419686 - MER68 LTR ERV1 -11 551 144 389 127 0 0 chr5 139665846 139665901 -63419631 - MER1B DNA MER1_type -1 328 274 1093 113 5 49 chr5 139665966 139666151 -63419381 - MER1B DNA MER1_type -59 280 104 282 287 172 86 chr5 139667129 139667239 -63418293 + L3 LINE CR1 1083 1182 -395 2309 78 0 3 chr5 139667239 139667545 -63417987 + AluY SINE Alu 1 305 -6 282 287 172 86 chr5 139667545 139667782 -63417750 + L3 LINE CR1 1182 1460 -117 220 304 14 14 chr5 139667899 139667968 -63417564 - L2 LINE L2 -57 3256 3188 1202 113 9 28 chr5 139669045 139669258 -63416274 - L1MA9 LINE L1 -3 6309 6101 995 105 26 0 chr5 139669258 139669411 -63416121 - L1MA9 LINE L1 -771 5541 5385 6392 76 31 39 chr5 139669415 139670402 -63415130 - L1PA13 LINE L1 -1 6162 5177 6848 232 39 44 chr5 139670402 139670466 -63415066 - L1 LINE L1 -2079 5486 5423 1691 201 3 0 chr5 139670466 139670770 -63414762 - AluJb SINE Alu -7 305 1 6848 232 39 44 chr5 139670770 139671265 -63414267 - L1 LINE L1 -2142 5423 4927 1482 180 12 0 chr5 139671265 139671521 -63414011 - AluJo SINE Alu -7 305 47 6848 232 39 44 chr5 139671521 139672543 -63412989 - L1 LINE L1 -2638 4927 3901 1645 171 147 24 chr5 139672543 139672924 -63412608 + MSTA LTR MaLR 1 428 0 6848 232 39 44 chr5 139672924 139674935 -63410597 - L1 LINE L1 -3664 3901 2017 1013 226 121 16 chr5 139675824 139676130 -63409402 + MER46C DNA MER2_type 1 338 0 572 278 191 14 chr5 139678167 139678376 -63407156 - MIR SINE MIR -3 259 14 194 313 16 16 chr5 139678577 139678641 -63406891 - L3 LINE CR1 -1409 168 105 * 460 268 152 16 chr5 139678612 139678827 -63406705 + MIR SINE MIR 9 252 -10 1014 39 0 0 chr5 139679534 139679663 -63405869 + L1PA4 LINE L1 6027 6155 0 659 214 70 27 chr5 139679672 139679859 -63405673 - L1ME3 LINE L1 -6 6156 5962 446 209 48 9 chr5 139680577 139680682 -63404850 + MER94 DNA DNA 26 134 0 242 253 20 61 chr5 139681106 139681205 -63404327 - MIR SINE MIR -2 260 166 3560 108 23 7 chr5 139681240 139681806 -63403726 - L1PA16 LINE L1 0 6166 5592 535 257 21 21 chr5 139681844 139681984 -63403548 + MLT1H1 LTR MaLR 49 188 -367 9911 28 0 0 chr5 139681984 139683926 -63401606 - L1PA3 LINE L1 -1 6154 4211 12747 202 19 11 chr5 139683926 139685136 -63400396 - L1P4 LINE L1 -552 5614 4416 219 36 0 0 chr5 139685136 139685164 -63400368 + (TG)n Simple_repeat Simple_repeat 2 29 0 12747 202 19 11 chr5 139685164 139687135 -63398397 - L1P4 LINE L1 -1750 4416 2406 343 273 125 64 chr5 139687138 139687301 -63398231 - MIR SINE MIR -63 145 7 1663 174 3 34 chr5 139687770 139688063 -63397469 - AluJo SINE Alu -28 284 1 237 150 0 0 chr5 139688382 139688422 -63397110 - MIR SINE MIR -138 70 31 333 395 33 13 chr5 139688648 139688800 -63396732 + L2 LINE L2 3117 3271 -1 201 175 0 0 chr5 139688803 139688843 -63396689 + GA-rich Low_complexity Low_complexity 4 43 0 470 259 82 34 chr5 139689746 139689893 -63395639 - L2 LINE L2 0 3313 3160 983 270 60 50 chr5 139689896 139690333 -63395199 + L2 LINE L2 2827 3267 -46 1053 239 67 118 chr5 139690409 139690978 -63394554 + MLT1H1 LTR MaLR 1 553 -2 327 337 88 34 chr5 139691812 139692017 -63393515 - L3b LINE CR1 -19 1564 1349 2073 101 104 70 chr5 139692415 139692829 -63392703 - MSTA LTR MaLR 0 428 1 2505 84 0 0 chr5 139693070 139693379 -63392153 + AluSg SINE Alu 2 310 0 3105 158 17 17 chr5 139693970 139694564 -63390968 + L1MB4 LINE L1 5584 6177 -3 2294 116 0 0 chr5 139745401 139745702 -63339830 + AluSq SINE Alu 1 301 -12 3559 146 127 3 chr5 139745704 139746328 -63339204 + MER4D LTR ERV1 77 777 -126 1970 142 0 0 chr5 139746328 139746610 -63338922 + AluSx SINE Alu 1 282 -30 2265 86 10 0 chr5 139746767 139747058 -63338474 + AluSx SINE Alu 1 294 -18 1237 132 0 11 chr5 139747113 139747287 -63338245 + AluSx SINE Alu 1 172 -140 2660 42 0 6 chr5 139747479 139747791 -63337741 + AluY SINE Alu 1 310 -1 1576 99 0 9 chr5 139747802 139748025 -63337507 + AluSc SINE Alu 1 221 -88 1896 242 53 60 chr5 139748160 139748277 -63337255 - L1M4c LINE L1 -4424 1958 1842 1527 205 57 46 chr5 139748277 139748433 -63337099 + MLT1A2 LTR MaLR 1 154 -220 2384 98 3 0 chr5 139748433 139748740 -63336792 + AluSx SINE Alu 5 312 0 1527 205 57 46 chr5 139748740 139748953 -63336579 + MLT1A2 LTR MaLR 154 374 0 1896 242 53 60 chr5 139748953 139749809 -63335723 - L1M4c LINE L1 -4540 1842 955 611 225 7 35 chr5 139749814 139749956 -63335576 - MER21B LTR ERV1 -396 467 330 285 167 0 0 chr5 139749961 139750015 -63335517 + T-rich Low_complexity Low_complexity 1 54 0 1213 117 0 0 chr5 139750117 139750279 -63335253 + AluSg/x SINE Alu 130 291 -21 693 272 40 61 chr5 139750361 139750778 -63334754 + L1MEc LINE L1 1734 2139 -4257 2198 105 7 0 chr5 139750778 139751082 -63334450 + AluSq SINE Alu 1 306 -7 693 272 40 61 chr5 139751082 139751190 -63334342 + L1MEc LINE L1 2139 2248 -4148 28 29 0 0 chr5 139751201 139751236 -63334296 + AT_rich Low_complexity Low_complexity 1 35 0 2454 58 0 7 chr5 139751240 139751534 -63333998 + AluY SINE Alu 1 292 -19 1370 218 34 11 chr5 139751548 139751902 -63333630 + L1MEc LINE L1 3492 3853 -2362 4981 135 63 13 chr5 139751910 139752362 -63333170 + Tigger1 DNA MER2_type 24 452 -1966 2484 144 21 16 chr5 139752362 139752786 -63332746 - MSTB LTR MaLR 0 426 1 4981 135 63 13 chr5 139752786 139753157 -63332375 + Tigger1 DNA MER2_type 452 888 -1530 335 212 12 47 chr5 139753157 139753242 -63332290 - L1M4 LINE L1 -2055 4091 4010 894 253 47 0 chr5 139753266 139753499 -63332033 - L1M4 LINE L1 -2118 4028 3785 339 163 43 65 chr5 139753698 139753790 -63331742 + L1MB2 LINE L1 6082 6171 0 2220 105 0 3 chr5 139754126 139754420 -63331112 - AluSx SINE Alu -19 293 1 1351 199 62 7 chr5 139754425 139754716 -63330816 - AluJo SINE Alu -5 307 1 1787 147 42 7 chr5 139754792 139755077 -63330455 - AluSx SINE Alu -17 295 1 186 43 0 0 chr5 139755586 139755609 -63329923 + (CTA)n Simple_repeat Simple_repeat 2 24 0 585 155 56 21 chr5 139755683 139755742 -63329790 - L1M LINE L1 -769 5409 5354 2443 90 0 7 chr5 139755742 139756052 -63329480 + AluSg SINE Alu 1 308 -2 585 155 56 21 chr5 139756052 139756134 -63329398 - L1M LINE L1 -824 5354 5263 1684 123 35 35 chr5 139756237 139756498 -63329034 - AluSx SINE Alu -49 263 3 2098 114 33 10 chr5 139757042 139757341 -63328191 - AluSq SINE Alu -7 306 1 2226 102 30 3 chr5 139757590 139757894 -63327638 - AluSx SINE Alu 0 312 1 529 306 62 54 chr5 139757911 139758264 -63327268 + L2 LINE L2 2915 3270 -2 365 209 37 30 chr5 139758914 139759048 -63326484 - L1M4b LINE L1 -5181 1678 1544 569 257 7 34 chr5 139759057 139759205 -63326327 - MER21B LTR ERV1 -396 467 324 1062 165 0 103 chr5 139759241 139759412 -63326120 - AluJb SINE Alu -12 300 160 2343 98 0 19 chr5 139759412 139759730 -63325802 - AluSx SINE Alu 0 312 1 1062 165 0 103 chr5 139759730 139759800 -63325732 - AluJb SINE Alu -152 160 84 3769 221 62 84 chr5 139759805 139759867 -63325665 - L1M4b LINE L1 -5331 1528 1466 812 114 23 30 chr5 139759867 139759999 -63325533 + FLAM_C SINE Alu 1 131 -2 3769 221 62 84 chr5 139759999 139760510 -63325022 - L1M4b LINE L1 -5393 1466 945 1663 129 9 0 chr5 139760510 139760743 -63324789 - AluSx SINE Alu -77 235 1 3769 221 62 84 chr5 139760743 139761086 -63324446 - L1M4b LINE L1 -5914 945 644 1712 98 120 36 chr5 139761086 139761361 -63324171 + AluSp SINE Alu 1 298 -15 3769 221 62 84 chr5 139761361 139761714 -63323818 - L1M4b LINE L1 -6215 644 285 2510 82 0 0 chr5 139762004 139762309 -63323223 - AluSx SINE Alu -7 305 1 394 345 110 0 chr5 139762363 139762554 -63322978 + MIR SINE MIR 18 229 -33 2089 119 13 3 chr5 139762643 139762945 -63322587 - AluSx SINE Alu -7 305 1 397 207 55 79 chr5 139762948 139763112 -63322420 + MER106B DNA MER1_type 899 1058 -1 1889 167 3 3 chr5 139763610 139763915 -63321617 - AluSx SINE Alu -7 305 1 2368 90 6 0 chr5 139763951 139764262 -63321270 - AluSp SINE Alu 0 313 1 209 118 0 0 chr5 139764299 139764333 -63321199 - MIR SINE MIR -17 245 212 1852 141 3 21 chr5 139764431 139764714 -63320818 + AluJb SINE Alu 20 297 -15 258 301 79 35 chr5 139764714 139764910 -63320622 - L2 LINE L2 -172 3141 2934 671 223 66 0 chr5 139764924 139765090 -63320442 - MER96B DNA MER1_type? 0 417 241 1247 207 143 15 chr5 139765148 139765326 -63320206 - L2 LINE L2 -416 2898 2744 2300 97 3 7 chr5 139765326 139765626 -63319906 + AluSp SINE Alu 1 299 -14 1247 207 143 15 chr5 139765626 139765853 -63319679 - L2 LINE L2 -570 2744 2441 2223 112 0 0 chr5 139765975 139766271 -63319261 + AluSq SINE Alu 1 296 -17 1268 147 18 23 chr5 139766382 139766600 -63318932 + AluJb SINE Alu 81 297 -15 322 211 9 61 chr5 139766612 139766672 -63318860 + L1ME4a LINE L1 5990 6043 -78 1869 154 50 7 chr5 139766672 139766971 -63318561 - AluJb SINE Alu 0 312 1 322 211 9 61 chr5 139766971 139767024 -63318508 + L1ME4a LINE L1 6043 6097 -24 1828 122 10 47 chr5 139767024 139767320 -63318212 - AluSx SINE Alu -27 285 1 804 186 49 11 chr5 139767411 139767594 -63317938 + L1MB2 LINE L1 5980 6169 -2 2330 88 14 0 chr5 139767675 139767959 -63317573 - AluSg SINE Alu -22 288 1 588 228 38 19 chr5 139767971 139768129 -63317403 - L1MC4a LINE L1 -1879 5929 5769 2897 208 30 38 chr5 139768157 139768815 -63316717 - MER82 DNA MER2_type 0 653 1 233 272 22 22 chr5 139768849 139768941 -63316591 - L1MC4a LINE L1 -1130 5016 4925 2015 136 3 11 chr5 139769017 139769303 -63316229 - AluSq SINE Alu -29 284 1 239 310 35 14 chr5 139769350 139769492 -63316040 - L1MC4a LINE L1 -1273 4873 4729 1149 91 0 0 chr5 139769510 139769653 -63315879 + AluSx SINE Alu 5 147 -166 1976 148 0 20 chr5 139770154 139770451 -63315081 + AluJb SINE Alu 1 291 -21 186 43 0 0 chr5 139772070 139772093 -63313439 + (A)n Simple_repeat Simple_repeat 1 23 0 1504 202 48 7 chr5 139772232 139772504 -63313028 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr5 139772591 139772612 -63312920 + AT_rich Low_complexity Low_complexity 1 21 0 1102 96 0 7 chr5 139772612 139772758 -63312774 + AluSx SINE Alu 152 296 -16 404 299 80 30 chr5 139772847 139773048 -63312484 + L1ME LINE L1 5564 5774 -347 226 203 17 17 chr5 139773151 139773210 -63312322 + LTR66 LTR ERVL 378 436 -174 469 284 104 25 chr5 139773481 139773682 -63311850 - LTR67 LTR ERVL -340 217 1 25 0 0 0 chr5 139773751 139773776 -63311756 + AT_rich Low_complexity Low_complexity 1 25 0 1542 127 127 15 chr5 139773955 139774223 -63311309 - AluJb SINE Alu -14 298 1 2132 93 14 0 chr5 139774941 139775247 -63310285 - AluSx SINE Alu 0 310 1 3607 192 50 31 chr5 139775793 139776232 -63309300 - L1ME1 LINE L1 -5 6230 5801 228 35 0 0 chr5 139776232 139776261 -63309271 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3607 192 50 31 chr5 139776261 139776373 -63309159 - L1ME1 LINE L1 -434 5801 5693 1967 145 30 7 chr5 139776373 139776676 -63308856 + AluSx SINE Alu 1 310 -2 3607 192 50 31 chr5 139776676 139777122 -63308410 - L1ME1 LINE L1 -542 5693 5217 1120 244 67 10 chr5 139777110 139777422 -63308110 - L1ME1 LINE L1 -6031 365 36 * 1085 221 185 43 chr5 139777575 139777992 -63307540 - LTR50 LTR ERVL -316 479 4 1893 119 0 36 chr5 139778079 139778357 -63307175 + AluSx SINE Alu 6 273 -39 621 279 21 71 chr5 139778529 139778855 -63306677 - ERVL LTR ERVL -257 5507 5198 244 123 0 53 chr5 139778856 139778913 -63306619 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 2092 278 80 21 chr5 139778928 139779117 -63306415 - ERVL LTR ERVL -752 5012 4836 1877 207 88 107 chr5 139779117 139779958 -63305574 - LTR1B LTR ERV1 0 826 2 2092 278 80 21 chr5 139779958 139780541 -63304991 - ERVL LTR ERVL -928 4836 4194 2106 136 10 0 chr5 139780594 139780895 -63304637 + AluJb SINE Alu 1 304 -8 2006 129 14 0 chr5 139780895 139781181 -63304351 + AluSx SINE Alu 1 291 -21 2235 114 3 0 chr5 139782704 139783001 -63302531 - AluSq SINE Alu -13 300 3 183 47 23 47 chr5 139783006 139783049 -63302483 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1381 166 4 72 chr5 139783052 139783330 -63302202 - AluJo SINE Alu -53 259 1 186 194 60 90 chr5 139784488 139784555 -63300977 + MER5A DNA MER1_type 56 120 -69 2407 150 39 7 chr5 139784706 139785119 -63300413 - MSTB LTR MaLR 0 426 1 2247 115 0 7 chr5 139785342 139785646 -63299886 - AluSx SINE Alu -10 302 1 2158 115 0 0 chr5 139785918 139786204 -63299328 - AluSx SINE Alu -26 286 1 604 265 0 0 chr5 139786981 139787113 -63298419 + MER94 DNA DNA 1 132 -2 300 158 31 181 chr5 139787370 139787423 -63298109 - L1M4 LINE L1 -3206 2940 2881 1735 165 3 51 chr5 139787423 139787738 -63297794 - AluJb SINE Alu -12 300 1 300 158 31 181 chr5 139787738 139787819 -63297713 - L1M4 LINE L1 -3265 2881 2859 4252 138 19 18 chr5 139787819 139788099 -63297433 - L1MA8 LINE L1 0 6291 6013 2236 126 126 11 chr5 139788099 139788480 -63297052 - MSTA LTR MaLR 0 428 4 4252 138 19 18 chr5 139788480 139788931 -63296601 - L1MA8 LINE L1 -278 6013 5559 300 158 31 181 chr5 139788931 139789049 -63296483 - L1M4 LINE L1 -3287 2859 2725 21 36 0 0 chr5 139789063 139789091 -63296441 + AT_rich Low_complexity Low_complexity 1 28 0 2221 138 0 0 chr5 139789122 139789434 -63296098 + AluSx SINE Alu 1 312 0 2837 209 72 24 chr5 139790066 139790097 -63295435 - MER21B LTR ERV1 -115 748 720 330 26 0 0 chr5 139790097 139790136 -63295396 + (CAATT)n Simple_repeat Simple_repeat 3 41 0 2837 209 72 24 chr5 139790136 139790725 -63294807 - MER21B LTR ERV1 -143 720 98 3850 180 119 18 chr5 139790751 139791534 -63293998 + MER21B LTR ERV1 1 862 -1 4215 117 24 6 chr5 139791569 139792193 -63293339 - MER41B LTR ERV1 0 635 1 1755 165 78 54 chr5 139792322 139792747 -63292785 + MER54B LTR ERVL 359 793 0 271 268 0 93 chr5 139792826 139792923 -63292609 - MER21B LTR ERV1 -767 96 9 394 292 110 67 chr5 139792932 139793443 -63292089 + MER34 LTR ERV1 10 542 0 296 304 46 52 chr5 139793717 139793911 -63291621 + MIR SINE MIR 18 210 -52 238 330 85 0 chr5 139794264 139794386 -63291146 - MIR SINE MIR -65 143 11 183 341 106 23 chr5 139794643 139794775 -63290757 + L3b LINE CR1 1440 1582 -1 475 110 0 27 chr5 139794873 139794946 -63290586 + MER4B LTR ERV1 1 71 -539 2380 93 3 0 chr5 139794950 139795251 -63290281 - AluSg1 SINE Alu -7 302 1 1215 174 179 98 chr5 139795510 139796023 -63289509 + MER34B LTR ERV1 8 562 -3 433 214 79 8 chr5 139796086 139796212 -63289320 - MIR SINE MIR -1 261 127 482 129 21 32 chr5 139796294 139796387 -63289145 - MER53 DNA DNA -97 92 1 972 260 116 8 chr5 139796391 139796753 -63288779 - LTR16B LTR ERVL -63 401 1 548 261 65 0 chr5 139796754 139796892 -63288640 - MIR SINE MIR -115 147 1 1450 162 0 125 chr5 139797088 139797433 -63288099 - AluJo SINE Alu 0 302 1 2498 71 3 0 chr5 139798087 139798384 -63287148 - AluSp SINE Alu -15 298 1 1838 107 80 28 chr5 139798719 139799008 -63286524 - AluSx SINE Alu -8 304 1 216 0 0 0 chr5 139799145 139799169 -63286363 + (CA)n Simple_repeat Simple_repeat 2 25 0 1946 120 10 34 chr5 139800187 139800499 -63285033 + AluSx SINE Alu 1 305 0 760 163 0 71 chr5 139800652 139800793 -63284739 - FLAM_C SINE Alu -2 131 1 23 33 0 0 chr5 139800796 139800826 -63284706 + AT_rich Low_complexity Low_complexity 1 30 0 1824 170 36 15 chr5 139800880 139801216 -63284316 + MER61A LTR ERV1 1 343 0 1817 216 26 82 chr5 139801331 139801905 -63283627 - MER34 LTR ERV1 0 542 1 1635 151 4 23 chr5 139802310 139802575 -63282957 + AluJb SINE Alu 1 260 -52 234 360 30 0 chr5 139802585 139802685 -63282847 + MIR SINE MIR 37 139 -123 279 205 0 39 chr5 139802814 139802892 -63282640 + MER116 DNA Mariner 6 80 0 1865 136 52 0 chr5 139803495 139803767 -63281765 + AluSx SINE Alu 1 286 -26 7987 19 0 0 chr5 139803774 139805297 -63280235 + L1PA3 LINE L1 4632 6154 -1 26 30 0 0 chr5 139805698 139805731 -63279801 + AT_rich Low_complexity Low_complexity 1 33 0 1700 153 0 32 chr5 139805744 139806025 -63279507 - AluJo SINE Alu -28 284 13 337 281 207 0 chr5 139806102 139806237 -63279295 - MLT1J LTR MaLR -2 509 347 276 292 35 62 chr5 139806413 139806557 -63278975 - L2 LINE L2 0 3272 3133 1833 104 98 21 chr5 139807517 139807804 -63277728 - AluSx SINE Alu -3 309 1 198 0 0 0 chr5 139807806 139807828 -63277704 + (T)n Simple_repeat Simple_repeat 1 22 0 1949 152 3 16 chr5 139808045 139808361 -63277171 - AluJo SINE Alu 0 312 1 430 95 0 0 chr5 139808869 139808937 -63276595 + MER34C LTR ERV1 11 101 -464 2166 109 0 0 chr5 139808939 139809224 -63276308 + AluSq SINE Alu 17 301 -12 388 215 71 29 chr5 139809231 139809410 -63276122 + MER34B LTR ERV1 355 517 -25 251 231 0 0 chr5 139809772 139809824 -63275708 + LTR30 LTR ERV1 1 52 -670 1218 96 264 0 chr5 139809824 139810021 -63275511 + LTR12 LTR ERV1 53 301 -413 3768 155 138 7 chr5 139810329 139811059 -63274473 - LTR1B LTR ERV1 0 826 1 1749 170 3 0 chr5 139811060 139811343 -63274189 + AluJb SINE Alu 29 312 0 330 327 59 13 chr5 139811414 139811567 -63273965 - MIR3 SINE MIR -48 160 1 1055 163 321 8 chr5 139811874 139812861 -63272671 + L1MC4a LINE L1 6443 7604 -204 2061 122 104 40 chr5 139812861 139813045 -63272487 + MSTA LTR MaLR 1 172 -256 2252 58 3 76 chr5 139813045 139813373 -63272159 + AluY SINE Alu 1 304 -7 2061 122 104 40 chr5 139813373 139813590 -63271942 + MSTA LTR MaLR 172 428 0 1055 163 321 8 chr5 139813590 139813750 -63271782 + L1MC4a LINE L1 7604 7713 -95 948 238 15 0 chr5 139813889 139814095 -63271437 + MIR SINE MIR 30 238 -24 694 183 0 53 chr5 139814195 139814348 -63271184 - FLAM_C SINE Alu 0 133 1 1579 108 164 4 chr5 139814778 139815028 -63270504 + AluSg1 SINE Alu 1 290 -19 22 56 0 0 chr5 139815245 139815281 -63270251 + AT_rich Low_complexity Low_complexity 1 36 0 333 214 86 34 chr5 139815311 139815428 -63270104 - MIR SINE MIR 0 262 140 189 0 0 0 chr5 139816196 139816217 -63269315 + (A)n Simple_repeat Simple_repeat 1 21 0 618 271 99 10 chr5 139816227 139816419 -63269113 - LTR33 LTR ERVL -294 227 19 241 204 0 0 chr5 139816457 139816506 -63269026 + LTR67 LTR ERVL 509 557 0 250 304 25 0 chr5 139816507 139816586 -63268946 - MIR SINE MIR -118 144 64 231 151 75 0 chr5 139816635 139816688 -63268844 - HAL1 LINE L1 -444 2063 2007 498 212 35 0 chr5 139816693 139816806 -63268726 - L1MB4 LINE L1 0 6180 6064 189 0 0 0 chr5 139817352 139817373 -63268159 + (A)n Simple_repeat Simple_repeat 1 21 0 1373 212 24 3 chr5 139817588 139817876 -63267656 + AluJo SINE Alu 1 294 -18 501 274 147 8 chr5 139818662 139818914 -63266618 - HAL1 LINE L1 -310 2197 1911 1902 136 37 7 chr5 139819215 139819509 -63266023 - AluSq SINE Alu -10 303 1 1763 91 0 25 chr5 139820501 139820742 -63264790 + AluSx SINE Alu 62 296 -16 1337 165 0 0 chr5 139820767 139820979 -63264553 + AluSx SINE Alu 1 212 -100 425 54 0 0 chr5 139820979 139821035 -63264497 + AluSp SINE Alu 78 133 -180 297 96 0 77 chr5 139821591 139821643 -63263889 + AluSp SINE Alu 121 168 -135 2206 117 0 7 chr5 139822706 139823004 -63262528 + AluSg SINE Alu 1 296 -14 1314 180 124 19 chr5 139823087 139823354 -63262178 - AluJo SINE Alu -17 295 1 1823 159 3 23 chr5 139823360 139823661 -63261871 - AluJb SINE Alu -15 297 3 1604 173 3 50 chr5 139823714 139824015 -63261517 + AluJb SINE Alu 1 287 -25 1685 163 3 47 chr5 139824198 139824517 -63261015 + AluJb SINE Alu 5 309 -3 558 231 69 17 chr5 139825960 139826133 -63259399 - MIR SINE MIR -1 261 80 921 183 94 11 chr5 139826451 139826631 -63258901 - AluJo SINE Alu -117 195 1 2305 80 0 26 chr5 139826737 139827039 -63258493 - AluSx SINE Alu -18 294 1 1838 135 0 15 chr5 139827846 139828113 -63257419 - AluSx SINE Alu -49 263 1 1716 175 33 7 chr5 139828154 139828457 -63257075 - AluJo SINE Alu 0 312 2 637 131 61 0 chr5 139828719 139828818 -63256714 - U6 snRNA snRNA -1 106 2 2170 89 4 0 chr5 139828848 139829119 -63256413 + AluSg SINE Alu 1 272 -38 643 168 0 17 chr5 139829120 139829239 -63256293 + AluJb SINE Alu 175 291 -21 2091 135 7 3 chr5 139829242 139829546 -63255986 + AluSx SINE Alu 1 305 -7 25 0 0 0 chr5 139829560 139829585 -63255947 + AT_rich Low_complexity Low_complexity 1 25 0 782 227 41 12 chr5 139829932 139830104 -63255428 - MER58A DNA MER1_type -5 219 43 1498 156 0 0 chr5 139830617 139830835 -63254697 + AluSx SINE Alu 1 218 -94 383 260 207 12 chr5 139830936 139831105 -63254427 - L2 LINE L2 -546 2768 2567 33 25 0 0 chr5 139831558 139831598 -63253934 + AT_rich Low_complexity Low_complexity 1 40 0 2316 112 0 3 chr5 139831658 139831962 -63253570 - AluSx SINE Alu -9 303 1 2200 135 3 0 chr5 139832723 139833034 -63252498 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 139833239 139833261 -63252271 + AT_rich Low_complexity Low_complexity 1 22 0 2267 115 3 0 chr5 139833304 139833609 -63251923 + AluSx SINE Alu 1 306 -6 1750 157 0 31 chr5 139833951 139834244 -63251288 - AluJo SINE Alu -28 284 1 2135 129 10 7 chr5 139834840 139835150 -63250382 - AluSq SINE Alu -1 312 2 762 118 134 0 chr5 139835358 139835485 -63250047 - FRAM SINE Alu -7 169 26 307 221 13 13 chr5 139835485 139835562 -63249970 + MIR SINE MIR 174 250 -12 896 73 9 0 chr5 139835608 139835717 -63249815 + AluSq/x SINE Alu 1 110 -202 4151 231 46 5 chr5 139835824 139836880 -63248652 - L1M4 LINE L1 -804 5342 4243 3200 65 29 1 chr5 139837306 139837816 -63247716 + LTR10C LTR ERV1 1 591 0 2335 82 0 0 chr5 139837876 139838169 -63247363 - AluSg SINE Alu -17 293 1 2344 60 0 0 chr5 139838173 139838454 -63247078 - AluY SINE Alu -4 307 27 1304 153 60 0 chr5 139839129 139839345 -63246187 + AluJb SINE Alu 83 311 -1 919 164 0 26 chr5 139839389 139839541 -63245991 + MER1B DNA MER1_type 1 148 -149 299 264 123 134 chr5 139839764 139840218 -63245314 + L2 LINE L2 2823 3271 -1 1691 190 20 7 chr5 139840284 139840579 -63244953 + AluJb SINE Alu 1 299 -13 2080 117 11 0 chr5 139840723 139841005 -63244527 - AluSp SINE Alu -28 285 1 1484 170 3 47 chr5 139841429 139841746 -63243786 + L1MB7 LINE L1 5863 6165 -19 234 0 0 0 chr5 139842567 139842593 -63242939 + (T)n Simple_repeat Simple_repeat 1 26 0 2092 123 9 22 chr5 139842612 139842928 -63242604 + AluSx SINE Alu 1 312 0 27 0 0 0 chr5 139843052 139843079 -63242453 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr5 139844533 139844554 -63240978 + (A)n Simple_repeat Simple_repeat 1 21 0 202 151 75 0 chr5 139844640 139844693 -63240839 + T-rich Low_complexity Low_complexity 2 58 0 1041 116 0 0 chr5 139844695 139844833 -63240699 + AluSq/x SINE Alu 1 138 -175 2480 63 3 3 chr5 139844834 139845134 -63240398 + AluSc SINE Alu 1 300 -9 1397 163 27 93 chr5 139845136 139845468 -63240064 + AluJo SINE Alu 1 310 -2 2192 89 11 3 chr5 139845538 139845820 -63239712 + AluSc SINE Alu 1 284 -25 2372 81 0 0 chr5 139845830 139846140 -63239392 + AluY SINE Alu 1 310 0 2487 59 0 7 chr5 139847396 139847701 -63237831 + AluY SINE Alu 1 303 -8 2181 125 0 3 chr5 139848060 139848365 -63237167 + AluSq SINE Alu 1 304 -9 348 242 0 0 chr5 139848378 139848440 -63237092 + AluSg/x SINE Alu 136 197 -105 2013 123 14 0 chr5 139848991 139849283 -63236249 - AluSx SINE Alu -16 296 1 2305 94 3 0 chr5 139849586 139849883 -63235649 - AluSp SINE Alu -15 298 1 366 270 23 93 chr5 139849940 139850113 -63235419 + L1MC4a LINE L1 5685 5868 -1940 1529 188 52 3 chr5 139850113 139850401 -63235131 + AluJb SINE Alu 1 302 -10 366 270 23 93 chr5 139850401 139850457 -63235075 + L1MC4a LINE L1 5868 5897 -1911 2367 89 0 0 chr5 139850457 139850750 -63234782 + AluSg SINE Alu 1 293 -17 366 270 23 93 chr5 139850750 139850778 -63234754 + L1MC4a LINE L1 5897 5925 -1883 587 203 39 0 chr5 139850811 139850939 -63234593 + FLAM_A SINE Alu 10 142 0 24 67 0 0 chr5 139851060 139851105 -63234427 + AT_rich Low_complexity Low_complexity 1 45 0 349 260 203 13 chr5 139851139 139851366 -63234166 - L1ME4a LINE L1 -288 5833 5564 231 208 139 0 chr5 139851452 139851524 -63234008 - L1P5 LINE L1 -724 5432 5351 2323 88 0 0 chr5 139851960 139852269 -63233263 + AluSq SINE Alu 3 311 0 24 0 0 0 chr5 139852269 139852293 -63233239 + AT_rich Low_complexity Low_complexity 1 24 0 2034 118 7 14 chr5 139852313 139852609 -63232923 + AluSx SINE Alu 1 294 -18 924 150 5 61 chr5 139852873 139853513 -63232019 + SVA Other Other 442 642 -744 1093 128 58 0 chr5 139853641 139853797 -63231735 + AluSg/x SINE Alu 129 293 -19 1883 161 7 7 chr5 139853839 139854138 -63231394 + AluJb SINE Alu 1 299 -13 231 240 111 67 chr5 139854174 139854399 -63231133 + L1ME4a LINE L1 5886 6120 -1 310 267 84 15 chr5 139854782 139854913 -63230619 - MIR SINE MIR -5 257 118 2160 99 14 14 chr5 139855164 139855456 -63230076 - AluSx SINE Alu -10 302 11 282 185 0 111 chr5 139856195 139856276 -63229256 + MER5A DNA MER1_type 38 109 -80 324 0 0 0 chr5 139856545 139856581 -63228951 + (CA)n Simple_repeat Simple_repeat 2 37 0 2493 59 7 10 chr5 139857675 139857980 -63227552 - AluSp SINE Alu -7 306 3 331 259 0 0 chr5 139858791 139858872 -63226660 - MER5A DNA MER1_type -83 106 26 2325 97 0 7 chr5 139859027 139859336 -63226196 - AluSq SINE Alu -6 307 1 2277 93 3 0 chr5 139859342 139859633 -63225899 - AluSg SINE Alu -18 292 1 2281 84 0 7 chr5 139859643 139859941 -63225591 - AluSg SINE Alu -14 296 1 1552 142 23 11 chr5 139860122 139860382 -63225150 - AluJb SINE Alu -49 263 1 2305 75 0 0 chr5 139860778 139861085 -63224447 - AluSc SINE Alu 0 307 1 1973 153 0 7 chr5 139861321 139861615 -63223917 + AluSx SINE Alu 1 292 -20 2032 118 0 30 chr5 139861897 139862201 -63223331 + AluSg SINE Alu 1 295 -15 4102 138 14 11 chr5 139862201 139862853 -63222679 - LTR8A LTR ERV1 -72 655 2 190 132 0 158 chr5 139862882 139862958 -63222574 - L2 LINE L2 -336 2977 2914 4577 62 17 2 chr5 139863032 139863609 -63221923 + LTR10C LTR ERV1 6 591 0 369 214 55 3 chr5 139863672 139863802 -63221730 + MER2 DNA MER2_type 1 143 -96 2257 84 7 0 chr5 139864907 139865203 -63220329 - AluSx SINE Alu -14 298 1 491 90 15 0 chr5 139865203 139865270 -63220262 - AluSp SINE Alu -168 145 78 1453 122 0 5 chr5 139865270 139865483 -63220049 - AluSp SINE Alu -101 212 1 325 254 120 7 chr5 139865549 139865691 -63219841 + MIR SINE MIR 28 185 -77 2597 37 0 7 chr5 139865959 139866259 -63219273 + AluY SINE Alu 1 298 -13 1101 152 43 52 chr5 139866266 139866477 -63219055 + AluJb SINE Alu 85 293 -19 1738 144 43 0 chr5 139867511 139867789 -63217743 - AluJo SINE Alu -10 302 13 1274 193 47 40 chr5 139867801 139867990 -63217542 - AluJo SINE Alu 0 306 113 1363 359 6 51 chr5 139867990 139868302 -63217230 + AluSq SINE Alu 1 298 -15 1274 193 47 40 chr5 139868302 139868410 -63217122 - AluJo SINE Alu -193 113 7 831 181 20 7 chr5 139868420 139868569 -63216963 - FRAM SINE Alu -15 161 11 1376 178 40 43 chr5 139868642 139868945 -63216587 - AluSx SINE Alu -6 306 5 1035 247 87 69 chr5 139869112 139869436 -63216096 - L1ME1 LINE L1 0 6166 5849 1965 124 43 10 chr5 139869436 139869735 -63215797 - AluSg SINE Alu -1 309 1 1035 247 87 69 chr5 139869735 139869901 -63215631 - L1ME1 LINE L1 -317 5849 5662 2144 123 0 16 chr5 139869901 139870210 -63215322 - AluSx SINE Alu -8 304 1 1035 247 87 69 chr5 139870210 139870272 -63215260 - L1ME1 LINE L1 -504 5662 5603 226 254 0 0 chr5 139870466 139870529 -63215003 - MIR3 SINE MIR -14 194 132 2361 98 3 16 chr5 139870639 139870956 -63214576 - AluSp SINE Alu 0 313 1 351 356 23 23 chr5 139870986 139871160 -63214372 + MIR SINE MIR 86 259 -3 203 133 44 0 chr5 139871753 139871798 -63213734 + T-rich Low_complexity Low_complexity 4 50 0 2326 103 3 3 chr5 139871909 139872221 -63213311 + AluSp SINE Alu 2 313 0 247 320 70 0 chr5 139872397 139872497 -63213035 - MIR SINE MIR -117 145 39 2301 108 0 3 chr5 139872820 139873125 -63212407 - AluSx SINE Alu -8 304 1 773 153 0 0 chr5 139873129 139873247 -63212285 - FLAM_C SINE Alu -13 130 13 1748 150 47 27 chr5 139873285 139873585 -63211947 - AluJb SINE Alu -6 306 1 329 286 38 60 chr5 139873761 139873946 -63211586 - L1MC4a LINE L1 -85 7723 7543 39 0 0 0 chr5 139873950 139873989 -63211543 + AT_rich Low_complexity Low_complexity 1 39 0 2184 81 32 3 chr5 139874016 139874301 -63211231 - AluSc SINE Alu -16 293 1 1594 167 48 4 chr5 139874302 139874572 -63210960 - AluJb SINE Alu -30 282 1 2090 134 7 0 chr5 139874641 139874939 -63210593 + AluSx SINE Alu 1 300 -12 2100 120 13 0 chr5 139876080 139876381 -63209151 - AluSx SINE Alu -7 305 1 681 164 0 18 chr5 139876424 139876534 -63208998 - FLAM_C SINE Alu -34 109 2 1597 175 14 17 chr5 139876536 139876833 -63208699 - AluJo SINE Alu -16 296 1 1722 105 41 129 chr5 139877294 139877474 -63208058 - AluSx SINE Alu 0 312 175 2236 102 3 3 chr5 139877474 139877777 -63207755 - AluSc SINE Alu -6 303 1 1722 105 41 129 chr5 139877777 139877938 -63207594 - AluSx SINE Alu -137 175 1 266 78 274 0 chr5 139878362 139878413 -63207119 + Tigger4(Zombi) DNA MER2_type 1 65 -2666 2219 120 0 0 chr5 139878438 139878738 -63206794 - AluSx SINE Alu -12 300 1 1098 108 0 0 chr5 139879744 139879883 -63205649 + AluSq/x SINE Alu 1 139 -174 1950 131 0 45 chr5 139879983 139880119 -63205413 + AluSx SINE Alu 10 128 -184 2592 62 0 0 chr5 139880119 139880424 -63205108 + AluSc SINE Alu 1 305 -4 1950 131 0 45 chr5 139880424 139880578 -63204954 + AluSx SINE Alu 128 287 -25 2433 96 0 10 chr5 139881219 139881532 -63204000 - AluSq SINE Alu -3 310 1 1872 145 14 3 chr5 139882141 139882438 -63203094 + AluSx SINE Alu 1 300 -12 456 91 65 0 chr5 139882837 139882914 -63202618 - L1M LINE L1 -894 5406 5325 679 132 0 9 chr5 139882914 139883129 -63202403 - AluJb SINE Alu -26 286 3 2077 187 62 15 chr5 139883133 139883362 -63202170 - L1 LINE L1 -816 5330 5113 1627 164 3 72 chr5 139883362 139883498 -63202034 + AluJb SINE Alu 1 145 -167 2292 102 0 0 chr5 139883498 139883791 -63201741 + AluSc SINE Alu 1 293 -16 1627 164 3 72 chr5 139883791 139883972 -63201560 + AluJb SINE Alu 145 296 -16 2077 187 62 15 chr5 139883972 139884212 -63201320 - L1 LINE L1 -1033 5113 4839 255 61 0 0 chr5 139884400 139884433 -63201099 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1814 167 0 21 chr5 139884436 139884586 -63200946 - AluJb SINE Alu -30 282 130 369 0 0 0 chr5 139884586 139884627 -63200905 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2048 132 4 0 chr5 139884627 139884908 -63200624 - AluSx SINE Alu -30 282 1 1814 167 0 21 chr5 139884908 139885044 -63200488 - AluJb SINE Alu -180 132 1 1117 136 0 0 chr5 139885093 139885248 -63200284 - AluSg/x SINE Alu -19 293 139 699 164 0 0 chr5 139885780 139885890 -63199642 + AluSq/x SINE Alu 2 111 -201 234 0 0 0 chr5 139885921 139885947 -63199585 + (A)n Simple_repeat Simple_repeat 1 26 0 553 191 18 18 chr5 139886278 139886388 -63199144 + AluSq/x SINE Alu 2 111 -201 243 0 0 0 chr5 139886420 139886447 -63199085 + (A)n Simple_repeat Simple_repeat 1 27 0 2080 135 3 0 chr5 139886866 139887163 -63198369 + AluSx SINE Alu 1 298 -14 231 36 0 0 chr5 139887166 139887194 -63198338 + (TA)n Simple_repeat Simple_repeat 1 28 0 1914 167 3 0 chr5 139887509 139887820 -63197712 - AluJo SINE Alu 0 312 1 1789 162 20 14 chr5 139887823 139888119 -63197413 - AluJo SINE Alu -14 298 1 820 174 14 0 chr5 139888158 139888296 -63197236 + L1M3 LINE L1 5549 5688 -492 2167 104 10 0 chr5 139888315 139888604 -63196928 + AluSx SINE Alu 6 297 -15 1757 159 18 0 chr5 139889051 139889327 -63196205 + AluJo SINE Alu 1 281 -31 234 0 0 0 chr5 139889332 139889358 -63196174 + (TA)n Simple_repeat Simple_repeat 2 27 0 219 293 151 9 chr5 139889589 139889695 -63195837 - MIR SINE MIR -110 152 32 1603 160 65 0 chr5 139889857 139890119 -63195413 - AluJo SINE Alu -30 282 4 1320 130 235 0 chr5 139890801 139891039 -63194493 - AluJb SINE Alu -7 295 2 2546 148 2 5 chr5 139891304 139891722 -63193810 + L1MB4 LINE L1 5547 5963 -217 2218 103 3 0 chr5 139891729 139892021 -63193511 + AluSp SINE Alu 1 293 -20 25 0 0 0 chr5 139942063 139942088 -63143444 + GC_rich Low_complexity Low_complexity 1 25 0 252 100 0 0 chr5 139942381 139942421 -63143111 + (C)n Simple_repeat Simple_repeat 1 40 0 1766 207 28 53 chr5 139943399 139944017 -63141515 - pTR5 LTR ERV1 -1094 1344 743 431 259 19 25 chr5 139944716 139944878 -63140654 - L1MC5 LINE L1 -37 7924 7764 23 0 0 0 chr5 139945169 139945192 -63140340 + GC_rich Low_complexity Low_complexity 1 23 0 1209 175 15 8 chr5 139947488 139947756 -63137776 + AluSx SINE Alu 1 270 -42 191 36 36 0 chr5 139948251 139948279 -63137253 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 200 0 100 0 chr5 139948541 139948571 -63136961 + C-rich Low_complexity Low_complexity 4 36 0 1816 134 0 28 chr5 139949593 139949915 -63135617 + AluSx SINE Alu 1 314 0 624 328 67 0 chr5 139949918 139950150 -63135382 - L1 LINE L1 -1527 4619 4374 999 251 38 81 chr5 139950155 139950625 -63134907 - LTR7 LTR ERV1 0 450 1 1350 123 56 0 chr5 139950714 139950909 -63134623 + AluSx SINE Alu 1 206 -106 234 0 0 0 chr5 139951426 139951452 -63134080 + (T)n Simple_repeat Simple_repeat 1 26 0 181 54 0 54 chr5 139953810 139953847 -63131685 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 2015 47 0 55 chr5 139954448 139954722 -63130810 - AluSc SINE Alu -12 297 39 1910 101 34 27 chr5 139954941 139955237 -63130295 - AluSx SINE Alu -14 298 1 1980 94 29 4 chr5 139955353 139955628 -63129904 + AluSx SINE Alu 1 282 -30 2052 145 3 0 chr5 139956721 139957024 -63128508 + AluSx SINE Alu 1 304 -8 2028 111 11 0 chr5 139957024 139957305 -63128227 + AluSq SINE Alu 1 282 -31 184 80 0 0 chr5 139957305 139957330 -63128202 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 588 250 16 0 chr5 139957337 139957465 -63128067 + FLAM_C SINE Alu 4 133 0 2010 121 3 26 chr5 139957766 139958072 -63127460 + AluSq SINE Alu 1 299 -14 227 77 0 0 chr5 139958216 139958255 -63127277 - AluSq SINE Alu -2 300 262 226 68 68 0 chr5 139959038 139959082 -63126450 + CT-rich Low_complexity Low_complexity 1 47 0 192 158 0 0 chr5 139959489 139959527 -63126005 + C-rich Low_complexity Low_complexity 5 42 0 1930 116 7 3 chr5 139960179 139960464 -63125068 - AluSq SINE Alu -27 286 1 324 275 18 37 chr5 139960466 139960481 -63125051 - L1M4 LINE L1 -1083 5063 5049 1963 115 0 18 chr5 139960481 139960946 -63124586 - AluSx SINE Alu 0 460 1 324 275 18 37 chr5 139960946 139961038 -63124494 - L1M4 LINE L1 -1097 5049 4957 565 250 29 138 chr5 139961067 139961209 -63124323 - MIR SINE MIR -4 258 159 1718 159 3 3 chr5 139961209 139961499 -63124033 + AluSx SINE Alu 1 290 -22 565 250 29 138 chr5 139961499 139961632 -63123900 - MIR SINE MIR -103 159 13 207 0 0 0 chr5 139961741 139961764 -63123768 + (TGG)n Simple_repeat Simple_repeat 1 23 0 940 91 0 0 chr5 139961764 139961885 -63123647 - AluSc SINE Alu -23 286 166 905 80 0 0 chr5 139961885 139961997 -63123535 + AluSc SINE Alu 18 129 -180 180 169 34 17 chr5 139962163 139962222 -63123310 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 271 0 51 0 chr5 139962513 139962552 -63122980 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1957 135 0 3 chr5 139962555 139962843 -63122689 - AluSx SINE Alu -25 287 1 701 325 82 49 chr5 139962889 139963092 -63122440 - L3 LINE CR1 -2 1575 1380 2025 126 7 3 chr5 139963092 139963402 -63122130 + AluSx SINE Alu 2 312 0 701 325 82 49 chr5 139963402 139963623 -63121909 - L3 LINE CR1 -197 1380 1137 2285 90 0 3 chr5 139963675 139963986 -63121546 - AluSg SINE Alu 0 310 1 1107 157 5 5 chr5 139964001 139964198 -63121334 - AluSg/x SINE Alu 0 310 114 256 175 0 0 chr5 139964338 139964378 -63121154 - MER58 DNA MER1_type -128 213 174 208 83 62 21 chr5 139964525 139964573 -63120959 + T-rich Low_complexity Low_complexity 6 55 0 2188 68 54 0 chr5 139964631 139964925 -63120607 + AluY SINE Alu 1 310 -1 2200 147 66 20 chr5 139965440 139965849 -63119683 + MSTB1 LTR MaLR 4 431 -1 407 90 15 0 chr5 139966274 139966341 -63119191 - Alu SINE Alu -3 308 241 378 42 0 0 chr5 139966804 139966852 -63118680 + (TG)n Simple_repeat Simple_repeat 1 48 0 1832 117 0 25 chr5 139966852 139967134 -63118398 - AluSx SINE Alu -37 275 1 627 310 84 53 chr5 139967191 139967549 -63117983 + MER115 DNA AcHobo 184 552 -141 2051 122 7 0 chr5 139968259 139968553 -63116979 + AluSx SINE Alu 1 296 -16 198 170 21 53 chr5 139968578 139968672 -63116860 + GA-rich Low_complexity Low_complexity 5 95 0 304 308 26 8 chr5 139968739 139968856 -63116676 - L1ME LINE L1 -429 5692 5574 1609 193 0 3 chr5 139969147 139969443 -63116089 - AluJo SINE Alu -17 295 1 219 69 0 0 chr5 139969453 139969482 -63116050 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1963 125 4 0 chr5 139969483 139969763 -63115769 - AluSp SINE Alu -32 281 1 1289 278 33 82 chr5 139969900 139969951 -63115581 + HAL1 LINE L1 1677 1729 -778 2288 103 0 0 chr5 139969951 139970253 -63115279 + AluSx SINE Alu 1 302 -10 1289 278 33 82 chr5 139970253 139970698 -63114834 + HAL1 LINE L1 1729 2194 -313 2008 147 0 0 chr5 139970698 139970997 -63114535 - AluSx SINE Alu -13 299 1 1289 278 33 82 chr5 139970997 139971080 -63114452 + HAL1 LINE L1 2194 2280 -227 273 29 0 0 chr5 139971080 139971114 -63114418 + (TG)n Simple_repeat Simple_repeat 2 35 0 1289 278 33 82 chr5 139971114 139971405 -63114127 + HAL1 LINE L1 2280 2506 -1 1255 106 6 0 chr5 139971775 139971955 -63113577 - AluSc SINE Alu -11 298 118 189 0 0 0 chr5 139971963 139971984 -63113548 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2191 91 7 0 chr5 139971991 139972289 -63113243 - AluSp SINE Alu -13 300 1 727 138 9 9 chr5 139972292 139972408 -63113124 - AluY SINE Alu -181 130 15 2101 121 7 0 chr5 139972612 139972919 -63112613 - AluSx SINE Alu -3 309 1 1325 156 4 17 chr5 139975003 139975241 -63110291 - AluJb SINE Alu 0 312 78 274 146 125 0 chr5 139975244 139975323 -63110209 + Alu SINE Alu 230 314 0 2314 76 0 0 chr5 139975323 139975626 -63109906 + AluY SINE Alu 1 303 -8 670 114 259 36 chr5 139975628 139975794 -63109738 + L1MA9 LINE L1 6101 6303 -9 375 85 0 0 chr5 139976142 139976189 -63109343 + AluSg/x SINE Alu 157 203 -97 2687 91 69 12 chr5 139976192 139976610 -63108922 + LTR7 LTR ERV1 1 442 -8 540 106 64 11 chr5 139976616 139976710 -63108822 + AluSg/x SINE Alu 203 301 -11 1046 281 56 28 chr5 139976710 139977030 -63108502 - L2 LINE L2 -617 2697 2369 2052 128 3 3 chr5 139977127 139977439 -63108093 + AluSx SINE Alu 1 312 0 597 281 126 27 chr5 139977451 139977785 -63107747 + L1MC4a LINE L1 5593 5959 -1849 336 248 73 18 chr5 139977911 139978020 -63107512 - LTR16A LTR ERVL 0 450 336 372 286 39 71 chr5 139978335 139978517 -63107015 - LTR16A LTR ERVL -142 308 133 2007 145 0 0 chr5 139978622 139978926 -63106606 + AluSq SINE Alu 1 304 -9 2020 123 0 0 chr5 139979345 139979651 -63105881 - AluSx SINE Alu 0 306 1 2085 111 10 0 chr5 139979763 139980061 -63105471 - AluSg SINE Alu -9 301 1 1705 167 10 10 chr5 139980181 139980493 -63105039 + AluJb SINE Alu 1 312 0 684 257 90 40 chr5 139980529 139980829 -63104703 + L1MC5 LINE L1 7603 7917 -44 1315 196 177 40 chr5 139981394 139981452 -63104080 - Charlie1b DNA MER1_type -2238 523 474 2188 110 0 0 chr5 139981452 139981742 -63103790 + AluSx SINE Alu 1 290 -22 1315 196 177 40 chr5 139981742 139981823 -63103709 - Charlie1b DNA MER1_type -2287 474 405 1553 177 19 35 chr5 139981823 139981960 -63103572 + AluJo SINE Alu 3 141 -171 2363 84 0 3 chr5 139981960 139982270 -63103262 + AluSx SINE Alu 1 309 -3 1553 177 19 35 chr5 139982270 139982443 -63103089 + AluJo SINE Alu 141 308 -4 1315 196 177 40 chr5 139982443 139982767 -63102765 - Charlie1b DNA MER1_type -2356 405 1 1511 98 9 9 chr5 139983061 139983286 -63102246 - AluSg/x SINE Alu -2 308 84 528 93 0 0 chr5 139983420 139983495 -63102037 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 2347 70 3 6 chr5 139984104 139984416 -63101116 + AluY SINE Alu 1 311 0 2072 113 20 0 chr5 139985371 139985672 -63099860 - AluSq SINE Alu -6 307 1 432 0 0 0 chr5 139985672 139985720 -63099812 + (ATG)n Simple_repeat Simple_repeat 2 49 0 833 138 7 0 chr5 139985720 139985881 -63099651 - AluSg/x SINE Alu 0 316 155 1224 127 0 79 chr5 139985910 139986138 -63099394 - AluJo SINE Alu -82 230 21 2081 96 10 13 chr5 139986182 139986484 -63099048 + AluSx SINE Alu 1 301 -11 1526 110 29 7 chr5 139986842 139987114 -63098418 - AluY SINE Alu -33 278 1 351 301 171 20 chr5 139987552 139987698 -63097834 + L2 LINE L2 3102 3269 -3 2173 103 3 3 chr5 139987730 139988032 -63097500 - AluSq SINE Alu -11 302 1 2023 122 3 0 chr5 139988232 139988528 -63097004 - AluSq SINE Alu -16 297 1 27 0 0 0 chr5 139988537 139988564 -63096968 + AT_rich Low_complexity Low_complexity 1 27 0 2099 121 0 3 chr5 139989610 139989916 -63095616 - AluSq SINE Alu -8 305 1 192 254 82 73 chr5 139989991 139990101 -63095431 - MIR SINE MIR -15 247 137 2394 74 7 0 chr5 139990111 139990421 -63095111 - AluSp SINE Alu -1 312 1 2370 81 3 0 chr5 139990425 139990733 -63094799 - AluSp SINE Alu -3 310 2 2274 76 0 7 chr5 139990738 139991042 -63094490 - AluSc SINE Alu -7 302 1 2251 78 7 0 chr5 139991339 139991633 -63093899 - AluSp SINE Alu -17 296 1 550 260 77 0 chr5 139991640 139991684 -63093848 - L1ME LINE L1 -510 5660 5621 342 0 0 0 chr5 139991684 139991722 -63093810 + (TA)n Simple_repeat Simple_repeat 2 39 0 550 260 77 0 chr5 139991722 139991846 -63093686 - L1ME LINE L1 -549 5621 5479 3403 179 28 32 chr5 139991919 139991966 -63093566 - L1MB7 LINE L1 -9 6175 6129 189 0 0 0 chr5 139991966 139991987 -63093545 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1419 139 66 36 chr5 139991987 139992261 -63093271 - AluJb SINE Alu -30 282 1 3403 179 28 32 chr5 139992261 139992932 -63092600 - L1MB7 LINE L1 -53 6131 5459 472 141 80 178 chr5 139992934 139992977 -63092555 - MLT1A2 LTR MaLR 0 390 344 1969 122 3 25 chr5 139992977 139993296 -63092236 + AluSx SINE Alu 1 312 0 472 141 80 178 chr5 139993296 139993415 -63092117 - MLT1A2 LTR MaLR -46 344 237 675 200 15 8 chr5 139993416 139993546 -63091986 - MLT1A2 LTR MaLR -243 131 1 871 163 30 38 chr5 139993546 139993772 -63091760 - L1MB7 LINE L1 -717 5461 5235 216 0 0 0 chr5 139993772 139993796 -63091736 + (TA)n Simple_repeat Simple_repeat 2 25 0 2135 85 3 0 chr5 139993796 139994079 -63091453 - AluY SINE Alu -12 299 16 871 163 30 38 chr5 139994079 139994094 -63091438 - L1MB7 LINE L1 -941 5237 5219 1549 169 60 7 chr5 139994271 139994555 -63090977 + AluJo SINE Alu 1 299 -13 2116 108 0 3 chr5 139995067 139995364 -63090168 + AluSx SINE Alu 1 296 -16 443 246 71 28 chr5 139995370 139995581 -63089951 + L1M4 LINE L1 2606 2825 -3321 469 179 24 0 chr5 139995646 139995730 -63089802 + AluJo SINE Alu 49 134 -178 204 226 38 0 chr5 139995738 139995791 -63089741 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 423 283 54 12 chr5 139995804 139996044 -63089488 + L1M4 LINE L1 2926 3175 -2971 2028 128 0 0 chr5 139996044 139996341 -63089191 + AluSx SINE Alu 1 297 -15 1861 148 17 0 chr5 139996421 139996719 -63088813 + AluSx SINE Alu 1 303 -9 1983 121 0 0 chr5 139997012 139997293 -63088239 - AluSx SINE Alu -31 281 1 275 273 91 0 chr5 139997489 139997555 -63087977 + MLT1I LTR MaLR 98 169 -240 213 94 0 0 chr5 139997562 139997594 -63087938 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 1589 99 6 131 chr5 139997627 139997941 -63087591 + AluSx SINE Alu 7 281 -31 276 53 0 0 chr5 139997960 139997998 -63087534 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1769 162 3 0 chr5 139998011 139998301 -63087231 + AluJo SINE Alu 1 291 -21 531 208 37 112 chr5 139998339 139998556 -63086976 + MLT1I LTR MaLR 199 549 0 2281 90 3 0 chr5 139998796 139999097 -63086435 + AluSp SINE Alu 1 302 -11 1915 137 3 0 chr5 139999108 139999401 -63086131 + AluSx SINE Alu 1 294 -18 467 108 14 0 chr5 139999443 139999517 -63086015 - HY3 scRNA scRNA -2 99 25 1003 315 86 40 chr5 139999589 140000594 -63084938 - L1M4 LINE L1 -1845 4301 3251 566 271 23 42 chr5 140000616 140000830 -63084702 - AluSg/x SINE Alu 0 312 103 774 130 26 0 chr5 140000930 140001045 -63084487 + AluSq/x SINE Alu 17 134 -179 1978 113 0 0 chr5 140001106 140001381 -63084151 + AluSx SINE Alu 1 275 -37 259 279 27 63 chr5 140001437 140001548 -63083984 - L3 LINE CR1 -14 1563 1457 204 324 29 0 chr5 140001580 140001648 -63083884 - L3 LINE CR1 -222 1355 1286 1836 131 0 24 chr5 140001707 140002022 -63083510 - AluSx SINE Alu 0 308 1 22 35 0 0 chr5 140002023 140002052 -63083480 + AT_rich Low_complexity Low_complexity 1 29 0 372 298 96 60 chr5 140002130 140002412 -63083120 - LTR67 LTR ERVL -264 293 2 401 286 51 13 chr5 140002457 140002691 -63082841 - L1M4 LINE L1 -2218 3928 3686 1750 163 0 7 chr5 140002781 140003076 -63082456 + AluJb SINE Alu 1 293 -19 2130 88 3 7 chr5 140003077 140003383 -63082149 + AluY SINE Alu 1 305 -6 556 253 58 19 chr5 140003403 140003557 -63081975 - MIR SINE MIR -27 235 76 625 205 252 0 chr5 140003670 140003821 -63081711 + MER5A DNA MER1_type 1 189 0 2009 125 3 3 chr5 140003863 140004166 -63081366 + AluSx SINE Alu 1 303 -9 1976 146 0 10 chr5 140004202 140004511 -63081021 + AluSx SINE Alu 1 306 -6 549 278 120 48 chr5 140004592 140005034 -63080498 + MLT1K LTR MaLR 1 474 -2 2044 118 0 3 chr5 140005138 140005426 -63080106 - AluSq SINE Alu -26 287 1 223 217 0 0 chr5 140005762 140005808 -63079724 + L2 LINE L2 3267 3312 -1 2138 119 3 0 chr5 140005823 140006183 -63079349 + AluSx SINE Alu 1 361 0 332 296 0 70 chr5 140007184 140007326 -63078206 - HAL1 LINE L1 -100 2407 2276 354 260 41 48 chr5 140007387 140007533 -63077999 - MER104 DNA Tc2 -4 176 32 2117 72 10 3 chr5 140007536 140007670 -63077862 + AluSx SINE Alu 1 133 -179 2211 88 0 3 chr5 140007670 140007965 -63077567 + AluSc SINE Alu 1 294 -15 1054 78 13 7 chr5 140007966 140008120 -63077412 + AluSg/x SINE Alu 138 292 -20 282 232 0 14 chr5 140008284 140008353 -63077179 - HsTC2 DNA Tc2 -608 1290 1223 * 517 182 36 9 chr5 140008348 140008458 -63077074 - HsTC2 DNA Tc2 -1782 116 4 213 162 0 0 chr5 140008524 140008561 -63076971 - L2 LINE L2 -251 3062 3026 1692 121 16 4 chr5 140008930 140009187 -63076345 + AluSq SINE Alu 1 260 -53 631 191 191 29 chr5 140009189 140009393 -63076139 - HAL1 LINE L1 -758 1749 1513 1760 89 4 0 chr5 140009419 140009655 -63075877 - AluSx SINE Alu -75 237 1 567 259 133 52 chr5 140010152 140010461 -63075071 - MER46C DNA MER2_type 0 338 5 2073 105 3 7 chr5 140010461 140010767 -63074765 - AluSc SINE Alu -4 305 1 182 62 31 0 chr5 140010796 140010828 -63074704 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1883 97 7 4 chr5 140010835 140011104 -63074428 - AluSq SINE Alu -43 270 1 2147 112 0 0 chr5 140012608 140012903 -63072629 + AluSq SINE Alu 1 295 -18 2061 126 0 7 chr5 140013104 140013413 -63072119 + AluSx SINE Alu 1 307 -5 197 308 66 44 chr5 140013611 140013702 -63071830 + L3 LINE CR1 880 972 -605 2246 105 0 3 chr5 140013817 140014131 -63071401 - AluSp SINE Alu 0 313 1 761 153 7 56 chr5 140014393 140014537 -63070995 - FLAM_C SINE Alu -5 138 2 237 33 0 0 chr5 140014615 140014645 -63070887 + (TG)n Simple_repeat Simple_repeat 1 30 0 2371 57 0 3 chr5 140014755 140015053 -63070479 - AluY SINE Alu -14 297 1 457 197 13 0 chr5 140015427 140015503 -63070029 + L1ME2 LINE L1 5512 5588 -576 1140 135 45 45 chr5 140015505 140015548 -63069984 + AluSg/x SINE Alu 83 125 -185 180 0 0 0 chr5 140015548 140015568 -63069964 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1140 135 45 45 chr5 140015568 140015635 -63069897 + AluSg/x SINE Alu 125 191 -119 2441 61 0 3 chr5 140015635 140015945 -63069587 - AluY SINE Alu -1 310 2 1140 135 45 45 chr5 140015945 140016055 -63069477 + AluSg/x SINE Alu 190 304 -6 202 206 32 0 chr5 140016058 140016121 -63069411 + GA-rich Low_complexity Low_complexity 2 66 0 625 191 125 0 chr5 140016123 140016259 -63069273 + L1ME2 LINE L1 5571 5723 -441 508 143 20 41 chr5 140016259 140016357 -63069175 + MER34 LTR ERV1 1 96 -446 1988 116 10 17 chr5 140016361 140016662 -63068870 + AluSx SINE Alu 2 300 -12 483 211 50 101 chr5 140016669 140016788 -63068744 + MER34 LTR ERV1 354 461 -81 1764 95 4 0 chr5 140016788 140017029 -63068503 + AluSg SINE Alu 1 242 -68 483 211 50 101 chr5 140017029 140017108 -63068424 + MER34 LTR ERV1 461 542 0 1148 203 68 17 chr5 140017109 140017404 -63068128 + L1ME2 LINE L1 5721 6030 -134 864 140 0 22 chr5 140017404 140017540 -63067992 + AluJo/FLAM SINE Alu 1 133 -169 1987 105 40 0 chr5 140017540 140017836 -63067696 + AluSq SINE Alu 1 308 -5 1991 113 10 3 chr5 140017838 140018138 -63067394 + AluSp SINE Alu 3 304 -9 1672 102 131 7 chr5 140018138 140018412 -63067120 + AluSg1 SINE Alu 1 308 -1 843 148 0 30 chr5 140018435 140018560 -63066972 + AluSq/x SINE Alu 6 128 -185 2134 121 0 13 chr5 140018560 140018874 -63066658 + AluSx SINE Alu 1 310 -2 566 265 14 14 chr5 140018910 140019057 -63066475 + L1ME2 LINE L1 6018 6164 0 1774 93 11 32 chr5 140019065 140019343 -63066189 + AluSg SINE Alu 39 310 0 2440 62 0 0 chr5 140019621 140019929 -63065603 + AluY SINE Alu 1 308 -3 764 157 0 0 chr5 140020033 140020148 -63065384 + AluSq/x SINE Alu 2 116 -197 1504 128 4 0 chr5 140020148 140020375 -63065157 - AluSg/x SINE Alu -7 303 76 2064 76 36 13 chr5 140020489 140020790 -63064742 - HERVH LTR ERV1 -7405 308 1 3491 62 0 7 chr5 140020792 140021243 -63064289 - LTR7 LTR ERV1 -2 448 1 180 0 0 0 chr5 140021437 140021457 -63064075 + (CCCCG)n Simple_repeat Simple_repeat 3 22 0 198 208 21 21 chr5 140023800 140023848 -63061684 - MER5B DNA MER1_type -48 130 83 272 264 82 45 chr5 140024345 140024455 -63061077 - L2 LINE L2 -1 3271 3158 301 333 116 0 chr5 140025360 140025498 -63060034 + MIR SINE MIR 67 220 -42 31 0 0 0 chr5 140025747 140025778 -63059754 + AT_rich Low_complexity Low_complexity 1 31 0 1836 122 75 0 chr5 140025783 140026061 -63059471 - AluSx SINE Alu -13 299 1 258 263 138 0 chr5 140026063 140026143 -63059389 - L2 LINE L2 -11 3261 3171 1888 130 13 7 chr5 140028005 140028305 -63057227 - AluSx SINE Alu -10 302 1 2681 126 0 8 chr5 140029231 140029619 -63055913 - pTR5 LTR ERV1 -2046 392 8 818 258 81 70 chr5 140030082 140030566 -63054966 + MER34 LTR ERV1 1 489 -53 * 1543 190 31 52 chr5 140030511 140030566 -63054966 + MSTC LTR MaLR 1 56 -368 2125 105 3 10 chr5 140030566 140030872 -63054660 + AluSx SINE Alu 1 304 -8 1543 190 31 52 chr5 140030872 140031134 -63054398 + MSTC LTR MaLR 56 360 -64 2144 99 10 0 chr5 140031134 140031436 -63054096 + AluSq SINE Alu 1 305 -8 1543 190 31 52 chr5 140031436 140031492 -63054040 + MSTC LTR MaLR 360 416 -8 266 173 37 49 chr5 140031499 140031580 -63053952 + MER34 LTR ERV1 435 514 -28 183 80 0 0 chr5 140031584 140031609 -63053923 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 261 0 0 0 chr5 140031629 140031658 -63053874 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 140031892 140031913 -63053619 + AT_rich Low_complexity Low_complexity 1 21 0 397 95 40 0 chr5 140031943 140032017 -63053515 + L1MB4 LINE L1 6104 6180 0 1417 189 33 13 chr5 140032469 140032771 -63052761 + AluJo SINE Alu 1 308 -4 390 206 27 0 chr5 140032860 140032933 -63052599 - MER2 DNA MER2_type 0 345 271 1018 183 6 0 chr5 140032939 140033119 -63052413 + AluJb SINE Alu 6 186 -126 1010 199 92 19 chr5 140033214 140033485 -63052047 + L1MC4 LINE L1 7283 7573 -469 779 186 0 0 chr5 140033487 140033611 -63051921 + FLAM_C SINE Alu 2 125 -18 860 167 144 70 chr5 140033613 140033831 -63051701 + L1MC4 LINE L1 7567 7810 -232 2365 59 0 3 chr5 140033831 140034134 -63051398 - AluY SINE Alu -9 302 1 860 167 144 70 chr5 140034134 140034185 -63051347 + L1MC4 LINE L1 7810 7856 -186 711 200 8 0 chr5 140034203 140034333 -63051199 + FLAM_C SINE Alu 2 132 -1 2401 79 0 0 chr5 140034341 140034644 -63050888 - AluY SINE Alu -7 304 2 219 36 0 0 chr5 140034646 140034674 -63050858 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1988 104 14 0 chr5 140034674 140034952 -63050580 - AluSx SINE Alu -30 282 1 2365 79 3 0 chr5 140034952 140035257 -63050275 - AluSp SINE Alu -7 306 1 611 172 9 9 chr5 140035263 140035379 -63050153 + Zaphod DNA AcHobo 3912 4027 -4 579 228 7 0 chr5 140035920 140036056 -63049476 + L1 LINE L1 5186 5322 -824 1864 105 42 21 chr5 140036066 140036352 -63049180 + AluSg SINE Alu 1 292 -18 1236 111 17 11 chr5 140036357 140036538 -63048994 + LTR9 LTR ERV1 431 612 0 268 61 0 0 chr5 140036553 140036586 -63048946 + HUERS-P3 LTR ERV1 15 47 -8872 1288 128 15 0 chr5 140036636 140036832 -63048700 + HUERS-P3 LTR ERV1 8720 8918 -1 415 118 0 44 chr5 140036832 140036900 -63048632 + LTR9 LTR ERV1 1 65 -547 2142 71 24 3 chr5 140036900 140037194 -63048338 - AluSq SINE Alu -10 303 4 364 78 0 0 chr5 140037196 140037247 -63048285 + LTR9 LTR ERV1 476 526 -86 777 122 2 114 chr5 140037251 140037416 -63048116 + L1ME LINE L1 5290 5398 -766 1974 121 0 16 chr5 140037416 140037721 -63047811 + AluSx SINE Alu 12 311 -1 777 122 2 114 chr5 140037721 140037801 -63047731 + L1ME LINE L1 5398 5485 -679 848 177 7 0 chr5 140037803 140037950 -63047582 + AluJ SINE Alu 4 151 -161 183 80 0 0 chr5 140037969 140037994 -63047538 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1096 126 29 0 chr5 140037998 140038173 -63047359 + L1P5 LINE L1 5485 5664 -492 677 181 9 0 chr5 140038183 140038299 -63047233 + FLAM_C SINE Alu 1 117 -16 700 28 79 32 chr5 140038316 140038535 -63046997 + (TA)n Simple_repeat Simple_repeat 1 229 0 398 190 51 0 chr5 140038535 140038614 -63046918 + AluJ SINE Alu 137 219 -83 309 109 0 0 chr5 140038731 140038777 -63046755 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 958 111 11 22 chr5 140038777 140038958 -63046574 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1998 108 14 3 chr5 140038965 140039262 -63046270 - AluSg SINE Alu -10 300 1 526 207 103 0 chr5 140039282 140039398 -63046134 - FLAM_C SINE Alu -11 132 5 2301 46 0 26 chr5 140039539 140039842 -63045690 - AluY SINE Alu -16 295 1 269 315 99 0 chr5 140039974 140040085 -63045447 - L2 LINE L2 -6 3266 3145 1043 209 112 153 chr5 140040114 140040382 -63045150 - MER50 LTR ERV1 0 734 457 422 89 0 0 chr5 140040382 140040438 -63045094 - AluSc SINE Alu -21 288 233 1043 209 112 153 chr5 140040438 140040870 -63044662 - MER50 LTR ERV1 -277 457 10 1727 112 131 4 chr5 140041043 140041311 -63044221 + AluSx SINE Alu 1 302 0 2087 107 7 3 chr5 140041315 140041624 -63043908 + AluSg SINE Alu 1 310 0 3331 29 5 0 chr5 140042565 140042950 -63042582 + L1PA3 LINE L1 5768 6154 -1 21 0 0 0 chr5 140043109 140043130 -63042402 + AT_rich Low_complexity Low_complexity 1 21 0 2321 69 0 7 chr5 140043674 140043977 -63041555 + AluY SINE Alu 1 301 -10 1815 117 11 0 chr5 140043994 140044267 -63041265 + AluSp SINE Alu 37 312 -1 1037 120 19 0 chr5 140044267 140044425 -63041107 + AluSg/x SINE Alu 134 294 -18 426 190 0 0 chr5 140044430 140044509 -63041023 - L1MB7 LINE L1 -10 6174 6096 23 0 0 0 chr5 140044509 140044532 -63041000 + AT_rich Low_complexity Low_complexity 1 23 0 681 162 52 0 chr5 140044545 140044681 -63040851 - L1MB4 LINE L1 -6 6174 6032 1001 126 32 63 chr5 140044714 140044904 -63040628 - AluJb SINE Alu -6 306 123 2272 88 0 0 chr5 140044963 140045258 -63040274 - AluSc SINE Alu -14 295 1 572 137 63 0 chr5 140045276 140045371 -63040161 - U6 snRNA snRNA -6 101 1 2469 59 0 0 chr5 140045969 140046276 -63039256 - AluY SINE Alu -4 307 1 426 245 42 28 chr5 140046313 140046456 -63039076 - LTR67 LTR ERVL 0 557 413 1935 158 0 0 chr5 140046561 140046865 -63038667 - AluSx SINE Alu -8 304 1 757 179 100 0 chr5 140046957 140047097 -63038435 + AluJo SINE Alu 1 154 -158 512 122 0 24 chr5 140047094 140047176 -63038356 + AluSg/x SINE Alu 211 290 -20 * 300 266 13 0 chr5 140047289 140047368 -63038164 - LTR67 LTR ERVL -473 84 5 234 0 0 0 chr5 140047900 140047926 -63037606 + (T)n Simple_repeat Simple_repeat 1 26 0 2394 70 0 3 chr5 140048883 140049185 -63036347 - AluY SINE Alu -10 301 1 571 287 94 5 chr5 140049710 140049912 -63035620 - MIR SINE MIR -6 256 37 2211 90 0 3 chr5 140050094 140050394 -63035138 - AluSx SINE Alu -13 299 1 1807 117 0 0 chr5 140050397 140050661 -63034871 - AluSg1 SINE Alu -7 302 39 2294 69 3 3 chr5 140050789 140051080 -63034452 - AluY SINE Alu -20 291 1 2089 68 7 7 chr5 140051589 140051906 -63033626 + AluY SINE Alu 1 317 0 881 77 17 0 chr5 140052265 140052382 -63033150 - AluSc SINE Alu -190 119 1 2022 117 7 7 chr5 140052454 140052761 -63032771 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr5 140052883 140052911 -63032621 + AT_rich Low_complexity Low_complexity 1 28 0 2221 96 3 16 chr5 140053549 140053863 -63031669 - AluSp SINE Alu -3 310 1 2053 73 7 14 chr5 140053877 140054187 -63031345 - AluSg1 SINE Alu 0 309 1 2211 66 0 23 chr5 140054191 140054494 -63031038 - AluY SINE Alu -15 296 1 25 0 0 43 chr5 140054496 140054512 -63031020 + AT_rich Low_complexity Low_complexity 1 16 -29 1978 114 0 26 chr5 140054512 140054818 -63030714 - AluSc SINE Alu -11 298 1 1702 101 9 104 chr5 140054828 140055155 -63030377 - AluSx SINE Alu -16 296 1 25 0 0 43 chr5 140055155 140055174 -63030358 + AT_rich Low_complexity Low_complexity 25 45 0 1993 104 0 0 chr5 140055273 140055541 -63029991 + AluSx SINE Alu 10 277 -35 276 322 158 30 chr5 140055572 140055645 -63029887 - MIR SINE MIR 0 262 200 2199 68 7 29 chr5 140055645 140055953 -63029579 - AluY SINE Alu -10 301 1 276 322 158 30 chr5 140055953 140056081 -63029451 - MIR SINE MIR -62 200 35 408 300 50 14 chr5 140056545 140056685 -63028847 - L2 LINE L2 0 3313 3169 271 186 35 35 chr5 140056934 140057079 -63028453 + (TATATG)n Simple_repeat Simple_repeat 3 147 0 2163 105 0 10 chr5 140057079 140057383 -63028149 - AluSq SINE Alu -12 301 1 182 391 158 5 chr5 140057600 140057802 -63027730 - L2 LINE L2 -801 2513 2281 1788 123 3 53 chr5 140057888 140058189 -63027343 + AluSx SINE Alu 1 286 -26 1640 168 44 0 chr5 140058420 140058718 -63026814 - AluJb SINE Alu 0 312 2 390 304 93 63 chr5 140058835 140058906 -63026626 + L2 LINE L2 2715 2782 -532 610 206 7 57 chr5 140058906 140059047 -63026485 + MER94 DNA DNA 1 134 0 390 304 93 63 chr5 140059047 140059212 -63026320 + L2 LINE L2 2782 2958 -356 2022 131 0 0 chr5 140059214 140059505 -63026027 - AluY SINE Alu -20 291 1 936 125 31 0 chr5 140059508 140059636 -63025896 - AluSp SINE Alu -181 132 1 1936 144 7 13 chr5 140059639 140059938 -63025594 - AluSx SINE Alu -15 297 1 752 244 185 45 chr5 140060255 140060323 -63025209 - HAL1 LINE L1 -896 1611 1554 1616 100 43 9 chr5 140060323 140060596 -63024936 + AluSq SINE Alu 45 325 0 752 244 185 45 chr5 140060596 140060983 -63024549 - HAL1 LINE L1 -953 1554 1222 1588 187 25 48 chr5 140060983 140061299 -63024233 - AluJb SINE Alu -3 309 1 752 244 185 45 chr5 140061299 140061321 -63024211 - HAL1 LINE L1 -1285 1222 1204 2069 129 3 0 chr5 140061321 140061615 -63023917 - AluSx SINE Alu -17 295 1 752 244 185 45 chr5 140061615 140061675 -63023857 - HAL1 LINE L1 -1303 1204 1154 2118 130 20 0 chr5 140061675 140061967 -63023565 - AluSx SINE Alu -12 300 3 752 244 185 45 chr5 140061967 140062063 -63023469 - HAL1 LINE L1 -1353 1154 885 2540 52 10 0 chr5 140062100 140062405 -63023127 - AluSp SINE Alu -4 309 2 2261 92 0 3 chr5 140063123 140063407 -63022125 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr5 140063410 140063437 -63022095 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1990 120 35 0 chr5 140063472 140063755 -63021777 - AluSx SINE Alu -19 293 1 1901 157 0 32 chr5 140064655 140064968 -63020564 - AluJb SINE Alu -9 303 1 2087 109 3 16 chr5 140065145 140065456 -63020076 - AluSg SINE Alu -3 307 1 2293 95 14 0 chr5 140065464 140065759 -63019773 - AluSp SINE Alu -14 299 1 2215 125 3 3 chr5 140066307 140066619 -63018913 - AluSx SINE Alu 0 312 1 1200 212 0 40 chr5 140067324 140067574 -63017958 + AluJb SINE Alu 1 240 -72 707 99 22 0 chr5 140067574 140067699 -63017833 + AluJb SINE Alu 191 317 0 2226 57 11 14 chr5 140067699 140068005 -63017527 + AluY SINE Alu 2 306 0 240 35 0 0 chr5 140068293 140068322 -63017210 + (TG)n Simple_repeat Simple_repeat 1 29 0 211 402 58 0 chr5 140068362 140068449 -63017083 - L2 LINE L2 -58 3214 3123 2451 24 31 3 chr5 140068551 140068841 -63016691 - AluY SINE Alu -13 298 1 251 265 214 26 chr5 140069647 140069764 -63015768 - L2 LINE L2 -1 3271 3133 2000 84 11 14 chr5 140070200 140070475 -63015057 - AluSc SINE Alu -30 279 6 1565 97 9 9 chr5 140070875 140071092 -63014440 - AluSg/x SINE Alu -10 300 84 22 56 0 0 chr5 140071098 140071134 -63014398 + AT_rich Low_complexity Low_complexity 1 36 0 1098 144 48 5 chr5 140071135 140071323 -63014209 - AluJo SINE Alu -26 286 91 1926 156 3 13 chr5 140071338 140071653 -63013879 - AluSx SINE Alu 0 312 1 439 195 55 61 chr5 140071664 140071828 -63013704 - L1ME4a LINE L1 0 6121 5959 556 322 34 24 chr5 140072806 140073011 -63012521 + MER20B DNA MER1_type 1 207 -576 2093 129 0 3 chr5 140073249 140073557 -63011975 + AluSx SINE Alu 1 307 0 488 224 158 12 chr5 140073981 140074146 -63011386 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr5 140074175 140074196 -63011336 + AT_rich Low_complexity Low_complexity 1 21 0 2100 120 0 7 chr5 140074196 140074506 -63011026 + AluSx SINE Alu 1 308 0 645 201 79 0 chr5 140074615 140074754 -63010778 - MER5A DNA MER1_type -26 163 14 2278 129 0 0 chr5 140075038 140075347 -63010185 - AluSq SINE Alu -4 309 1 1838 198 5 67 chr5 140075758 140075965 -63009567 - MLT1A1 LTR MaLR 0 365 192 2286 115 0 0 chr5 140075965 140076277 -63009255 + AluSx SINE Alu 1 312 0 1838 198 5 67 chr5 140076277 140076458 -63009074 - MLT1A1 LTR MaLR -173 192 1 937 121 0 0 chr5 140076918 140077042 -63008490 - FLAM_C SINE Alu -19 124 1 324 0 0 0 chr5 140077063 140077099 -63008433 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1920 109 19 8 chr5 140077106 140077371 -63008161 - AluSg SINE Alu -37 273 6 275 304 25 16 chr5 140077565 140077703 -63007829 - L1P5 LINE L1 -697 5454 5316 2334 69 7 0 chr5 140077771 140078061 -63007471 + AluY SINE Alu 1 292 -19 1685 128 23 11 chr5 140078093 140078359 -63007173 - L1PB1 LINE L1 -1 6150 5882 582 271 145 50 chr5 140078381 140079277 -63006255 + L1ME LINE L1 2336 3316 -2830 643 256 61 6 chr5 140079456 140079636 -63005896 + L1MC4 LINE L1 6459 6648 -1394 238 226 90 6 chr5 140079641 140079740 -63005792 + L1ME LINE L1 3794 3905 -2241 904 285 62 70 chr5 140080111 140080158 -63005374 + L1ME LINE L1 4336 4382 -1764 2075 107 17 0 chr5 140080158 140080449 -63005083 - AluSg SINE Alu -14 296 1 904 285 62 70 chr5 140080449 140080843 -63004689 + L1ME LINE L1 4382 4778 -1368 2237 114 0 7 chr5 140080843 140081149 -63004383 + AluSx SINE Alu 1 304 -8 904 285 62 70 chr5 140081149 140081580 -63003952 + L1ME LINE L1 4778 5202 -944 356 275 93 86 chr5 140081689 140081980 -63003552 + L1ME LINE L1 5422 5714 -460 231 239 98 11 chr5 140082024 140082116 -63003416 + L1ME LINE L1 5790 5889 -281 432 192 117 8 chr5 140082284 140082404 -63003128 + MIR SINE MIR 12 144 -118 258 246 0 0 chr5 140082478 140082535 -63002997 + MLT1G LTR MaLR 88 144 -446 268 209 165 26 chr5 140082655 140082770 -63002762 + MLT1H LTR MaLR 420 541 -8 1607 140 0 65 chr5 140082794 140083116 -63002416 - AluJb SINE Alu -11 301 1 1420 121 0 177 chr5 140083144 140083500 -63002032 + AluYa5 SINE Alu 1 293 -18 393 333 56 0 chr5 140084313 140084439 -63001093 - MIR SINE MIR -81 181 49 2069 135 0 0 chr5 140084445 140084734 -63000798 + AluSx SINE Alu 1 289 -23 2392 98 0 3 chr5 140084944 140085251 -63000281 + AluSg SINE Alu 1 306 -4 233 288 18 90 chr5 140086466 140086577 -62998955 - MER91A DNA MER1_type 0 196 94 1167 157 5 5 chr5 140087579 140087770 -62997762 - AluSp SINE Alu -120 193 3 288 0 0 0 chr5 140087772 140087804 -62997728 + (TA)n Simple_repeat Simple_repeat 1 32 0 1647 131 127 4 chr5 140087805 140088073 -62997459 - AluJb SINE Alu -11 301 1 32 43 0 0 chr5 140089088 140089134 -62996398 + AT_rich Low_complexity Low_complexity 1 46 0 2078 116 11 0 chr5 140089278 140089562 -62995970 - AluSx SINE Alu -24 288 2 1732 164 14 3 chr5 140089725 140090018 -62995514 + AluSx SINE Alu 1 296 -16 2350 92 0 7 chr5 140090062 140090368 -62995164 - AluSp SINE Alu -9 304 1 2106 113 0 13 chr5 140090370 140090671 -62994861 - AluSx SINE Alu -15 297 1 1613 186 3 17 chr5 140090896 140091197 -62994335 - AluJo SINE Alu -14 298 2 184 183 50 67 chr5 140091497 140091557 -62993975 - L3b LINE CR1 -242 1341 1283 21 36 0 0 chr5 140091846 140091874 -62993658 + AT_rich Low_complexity Low_complexity 1 28 0 2407 92 0 0 chr5 140092767 140093073 -62992459 - AluSc SINE Alu -3 306 1 785 218 145 105 chr5 140093134 140093561 -62991971 - MLT1F LTR MaLR -1 541 98 2192 102 0 3 chr5 140093602 140093897 -62991635 - AluY SINE Alu -17 294 1 2167 128 0 10 chr5 140094681 140094994 -62990538 - AluSx SINE Alu -2 310 1 1629 179 3 17 chr5 140095013 140095310 -62990222 - AluSx SINE Alu -19 293 1 2145 122 3 0 chr5 140095703 140095997 -62989535 - AluSx SINE Alu -17 295 1 1992 145 0 0 chr5 140096227 140096535 -62988997 + AluSx SINE Alu 1 308 0 2615 58 3 0 chr5 140099541 140099851 -62985681 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 140100061 140100082 -62985450 + AT_rich Low_complexity Low_complexity 1 21 0 2036 184 8 32 chr5 140100326 140100700 -62984832 - MLT1A1 LTR MaLR 0 365 1 2263 119 3 0 chr5 140100705 140101017 -62984515 - AluSp SINE Alu 0 313 1 2012 134 3 7 chr5 140101363 140101654 -62983878 - AluSq SINE Alu -15 298 9 273 158 0 0 chr5 140101657 140101695 -62983837 - Alu SINE Alu -263 39 2 380 311 29 68 chr5 140102407 140102613 -62982919 - MIR3 SINE MIR -2 206 9 21 36 0 0 chr5 140103135 140103163 -62982369 + AT_rich Low_complexity Low_complexity 1 28 0 1514 210 146 85 chr5 140103226 140103885 -62981647 - L1MD3 LINE L1 -1 7876 7201 276 186 0 137 chr5 140103885 140103987 -62981545 - MLT1F LTR MaLR -437 130 43 230 0 0 32 chr5 140104036 140104067 -62981465 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 2813 215 64 15 chr5 140104068 140104751 -62980781 - L1MC3 LINE L1 -771 7014 6298 2322 91 0 10 chr5 140105206 140105504 -62980028 - AluSx SINE Alu -13 299 5 375 23 0 0 chr5 140106426 140106470 -62979062 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 1970 117 11 11 chr5 140106473 140106756 -62978776 - AluSx SINE Alu -29 283 1 2264 118 10 0 chr5 140106831 140107137 -62978395 + AluSq SINE Alu 1 309 -4 2111 136 0 7 chr5 140107487 140107796 -62977736 - AluSx SINE Alu -5 307 1 26 30 0 0 chr5 140108235 140108268 -62977264 + AT_rich Low_complexity Low_complexity 1 33 0 1878 109 72 0 chr5 140108981 140109257 -62976275 - AluSx SINE Alu -16 296 1 188 386 114 0 chr5 140110182 140110252 -62975280 + MER5B DNA MER1_type 1 78 -100 21 36 0 0 chr5 140110589 140110617 -62974915 + AT_rich Low_complexity Low_complexity 1 28 0 1264 142 82 30 chr5 140111192 140111496 -62974036 - MER33 DNA MER1_type -11 313 1 816 160 0 0 chr5 140111830 140111955 -62973577 - AluSq/x SINE Alu -188 125 1 304 319 153 21 chr5 140112596 140112740 -62972792 - MIR SINE MIR -71 191 29 259 306 22 16 chr5 140112745 140112868 -62972664 - MIR SINE MIR -62 146 37 550 308 84 5 chr5 140113248 140113462 -62972070 + MIR SINE MIR 5 235 -27 331 305 76 46 chr5 140114159 140114290 -62971242 - L2 LINE L2 0 3272 3138 2030 102 49 3 chr5 140114345 140114629 -62970903 + AluSx SINE Alu 1 297 -15 347 288 181 0 chr5 140114658 140114818 -62970714 - L2 LINE L2 -1159 2155 1967 241 279 198 9 chr5 140114896 140115007 -62970525 + L2 LINE L2 3178 3309 -4 211 214 0 0 chr5 140115499 140115541 -62969991 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 1940 95 71 21 chr5 140115544 140115827 -62969705 - AluSc SINE Alu -12 297 1 325 247 147 13 chr5 140116130 140116280 -62969252 - MLT1K LTR MaLR -23 565 396 271 313 0 0 chr5 140116664 140116744 -62968788 - MLT1K LTR MaLR -329 259 180 596 235 17 0 chr5 140117069 140117214 -62968318 + MER63 DNA MER1_type 679 1688 0 22 0 0 0 chr5 140117413 140117435 -62968097 + AT_rich Low_complexity Low_complexity 1 22 0 2028 137 0 7 chr5 140118951 140119243 -62966289 + AluSx SINE Alu 1 290 -22 2030 96 60 0 chr5 140119285 140119566 -62965966 - AluSx SINE Alu -13 299 2 28 29 0 0 chr5 140119776 140119811 -62965721 + AT_rich Low_complexity Low_complexity 1 35 0 358 287 0 0 chr5 140119875 140119976 -62965556 + Charlie7 DNA MER1_type 1 101 -2511 486 211 97 63 chr5 140120887 140121062 -62964470 - MLT1H1 LTR MaLR -12 543 363 1614 128 4 4 chr5 140121164 140121398 -62964134 - AluSc SINE Alu -3 306 73 510 246 35 0 chr5 140121434 140121548 -62963984 - MLT1H1 LTR MaLR -437 118 1 2371 53 21 0 chr5 140121567 140121851 -62963681 + AluY SINE Alu 1 290 -21 420 211 129 88 chr5 140122546 140122717 -62962815 - MER5B DNA MER1_type 0 178 1 1682 130 161 4 chr5 140122771 140123032 -62962500 + AluSx SINE Alu 1 302 0 21 36 0 0 chr5 140123719 140123747 -62961785 + AT_rich Low_complexity Low_complexity 1 28 0 180 152 0 0 chr5 140124160 140124193 -62961339 + (TAA)n Simple_repeat Simple_repeat 1 33 0 1037 149 109 15 chr5 140124323 140124524 -62961008 - AluJb SINE Alu -8 304 85 1143 103 0 0 chr5 140125583 140125764 -62959768 - AluSp SINE Alu 0 321 141 388 249 131 29 chr5 140125981 140126294 -62959238 - L1MEd LINE L1 -5114 1005 661 3387 66 25 9 chr5 140126303 140126744 -62958788 - LTR7 LTR ERV1 -2 448 1 2626 71 42 13 chr5 140126744 140127125 -62958407 - HERVH LTR ERV1 0 7713 7322 1457 106 23 9 chr5 140127123 140127340 -62958192 - HERVH LTR ERV1 -1894 5819 5600 * 4265 141 9 5 chr5 140127341 140128000 -62957532 - HERVH LTR ERV1 -2564 5149 4488 6217 91 3 5 chr5 140128002 140128863 -62956669 - HERVH LTR ERV1 -3720 3993 3134 * 16731 87 6 27 chr5 140128834 140131413 -62954119 - HERVH LTR ERV1 -4718 2995 609 1491 113 19 18 chr5 140131414 140131699 -62953833 - HERVH LTR ERV1 -6946 767 464 352 271 119 17 chr5 140181759 140181877 -62903655 + MIR3 SINE MIR 15 144 -64 282 265 104 114 chr5 140182125 140182205 -62903327 - L2 LINE L2 -60 3212 3133 873 208 94 0 chr5 140182205 140182397 -62903135 - MER63A DNA MER1_type 0 210 1 282 265 104 114 chr5 140182397 140182709 -62902823 - L2 LINE L2 -139 3133 2824 422 258 142 62 chr5 140182762 140182987 -62902545 + MIR SINE MIR 9 251 -11 414 235 0 59 chr5 140183102 140183174 -62902358 - MER112 DNA MER1_type -25 235 173 2117 136 7 3 chr5 140183174 140183476 -62902056 + AluSx SINE Alu 1 303 -9 414 235 0 59 chr5 140183476 140183539 -62901993 - MER112 DNA MER1_type -87 173 108 408 20 0 0 chr5 140183847 140183896 -62901636 + (TG)n Simple_repeat Simple_repeat 1 49 0 1484 138 109 13 chr5 140184493 140184805 -62900727 + L1MC1 LINE L1 5992 6333 0 853 181 191 0 chr5 140185298 140185497 -62900035 + MER8 DNA MER2_type 3 239 0 4802 236 102 22 chr5 140187049 140187944 -62897588 + L2 LINE L2 852 1910 -1404 550 183 35 7 chr5 140187944 140188086 -62897446 - L1MA10 LINE L1 -10 6324 6179 4802 236 102 22 chr5 140188086 140188657 -62896875 + L2 LINE L2 1910 2434 -880 2348 101 0 0 chr5 140188935 140189232 -62896300 - AluSq SINE Alu -16 297 1 180 0 0 0 chr5 140189699 140189719 -62895813 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 346 294 7 62 chr5 140189787 140189933 -62895599 - HAL1b LINE L1 -437 911 774 483 270 58 18 chr5 140190566 140191076 -62894456 - HAL1 LINE L1 -860 1647 1066 2179 61 45 48 chr5 140191120 140191432 -62894100 - AluY SINE Alu 0 311 1 1800 176 3 3 chr5 140191459 140191754 -62893778 - AluJo SINE Alu -17 295 1 24 32 0 0 chr5 140191762 140191793 -62893739 + AT_rich Low_complexity Low_complexity 1 31 0 379 250 11 0 chr5 140192221 140192309 -62893223 - L2 LINE L2 0 3313 3225 450 288 114 34 chr5 140192310 140193086 -62892446 - L1ME LINE L1 -371 5791 4944 260 390 0 8 chr5 140193322 140193440 -62892092 - MIR3 SINE MIR -36 172 56 2123 131 3 22 chr5 140193442 140193756 -62891776 + AluSx SINE Alu 3 310 -2 240 111 0 0 chr5 140193760 140193805 -62891727 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 661 306 146 55 chr5 140193887 140194005 -62891527 - L1MC/D LINE L1 -754 5392 5286 678 174 0 58 chr5 140194005 140194143 -62891389 - FLAM_A SINE Alu -3 130 1 661 306 146 55 chr5 140194143 140195367 -62890165 - L1MC/D LINE L1 -860 5286 4067 4298 161 24 33 chr5 140195894 140196824 -62888708 + L1MC3 LINE L1 6864 7784 -1 338 213 0 38 chr5 140197026 140197106 -62888426 + L3b LINE CR1 1290 1366 -217 23 0 0 0 chr5 140197881 140197904 -62887628 + AT_rich Low_complexity Low_complexity 1 23 0 432 220 68 25 chr5 140199364 140199482 -62886050 + MIR3 SINE MIR 73 195 -13 204 40 0 0 chr5 140199498 140199523 -62886009 + (TG)n Simple_repeat Simple_repeat 2 26 0 1979 125 37 20 chr5 140199546 140199897 -62885635 + MER46B DNA MER2_type 3 234 -2 420 20 0 0 chr5 140199897 140199946 -62885586 + (TG)n Simple_repeat Simple_repeat 2 50 0 440 305 48 32 chr5 140200058 140200245 -62885287 + MIR SINE MIR 73 262 0 354 288 14 50 chr5 140202200 140202339 -62883193 - MIR SINE MIR -12 250 117 1927 190 114 32 chr5 140202848 140203454 -62882078 + L1ME2 LINE L1 5517 6333 -1 387 0 0 0 chr5 140203993 140204036 -62881496 + (T)n Simple_repeat Simple_repeat 1 43 0 711 100 18 0 chr5 140204066 140204176 -62881356 - L1PB1 LINE L1 -1 6150 6039 251 281 24 37 chr5 140204295 140204377 -62881155 - MER5B DNA MER1_type -15 163 83 304 183 28 0 chr5 140204424 140204495 -62881037 - L1MC5 LINE L1 -57 7904 7832 2277 87 0 0 chr5 140204501 140204787 -62880745 + AluSq SINE Alu 1 286 -27 2357 142 45 19 chr5 140204901 140205679 -62879853 - L1MB7 LINE L1 -19 6165 5281 1623 143 71 0 chr5 140205679 140205945 -62879587 - AluSg SINE Alu -25 285 1 2357 142 45 19 chr5 140205945 140206231 -62879301 - L1MB7 LINE L1 -903 5281 5004 858 192 62 0 chr5 140206782 140206959 -62878573 - MER5A DNA MER1_type 0 189 2 2159 128 6 6 chr5 140207166 140207478 -62878054 - AluSx SINE Alu 0 312 1 183 80 0 0 chr5 140207557 140207582 -62877950 + (T)n Simple_repeat Simple_repeat 1 25 0 2495 72 0 0 chr5 140208262 140208569 -62876963 + AluY SINE Alu 5 311 0 189 0 0 0 chr5 140209336 140209357 -62876175 + (A)n Simple_repeat Simple_repeat 1 21 0 2842 13 3 3 chr5 140210970 140211287 -62874245 - AluYb8 SINE Alu -1 317 1 2362 91 0 16 chr5 140212037 140212345 -62873187 - AluSc SINE Alu -6 303 1 1008 104 61 0 chr5 140212439 140212602 -62872930 - L1MA6 LINE L1 0 6300 6128 345 240 111 44 chr5 140214680 140214957 -62870575 + L1MA1 LINE L1 5580 5814 -307 285 357 54 9 chr5 140216299 140216411 -62869121 + L2 LINE L2 3137 3253 -19 2497 81 3 0 chr5 140216757 140217066 -62868466 + AluSp SINE Alu 1 310 -3 811 220 139 52 chr5 140217242 140217466 -62868066 - MER102b DNA MER1_type -1089 339 79 2292 92 3 3 chr5 140217466 140217759 -62867773 - AluSc SINE Alu -16 293 1 811 220 139 52 chr5 140217759 140217843 -62867689 - MER102b DNA MER1_type -1349 79 4 383 299 97 24 chr5 140219688 140219895 -62865637 + MIR SINE MIR 1 222 -40 2363 62 3 29 chr5 140222557 140222865 -62862667 - AluSc SINE Alu -9 300 1 1665 121 4 0 chr5 140224041 140224281 -62861251 + MLT2C2 LTR ERVL 11 251 -213 621 221 35 23 chr5 140224281 140224453 -62861079 + L1MB1 LINE L1 6002 6175 -14 1154 174 0 0 chr5 140224463 140224653 -62860879 + MLT2C2 LTR ERVL 235 472 -48 510 188 21 0 chr5 140225043 140225139 -62860393 + L1MD3 LINE L1 7888 7985 -10 233 244 22 67 chr5 140225912 140226002 -62859530 + HAL1 LINE L1 2422 2507 0 1564 156 4 0 chr5 140226131 140226369 -62859163 + AluJo SINE Alu 44 282 -30 471 18 0 0 chr5 140226374 140226430 -62859102 + (CTA)n Simple_repeat Simple_repeat 1 56 0 2208 105 0 45 chr5 140226932 140227066 -62858466 + AluSx SINE Alu 1 139 -173 7873 46 0 0 chr5 140227066 140228650 -62856882 + L1PA6 LINE L1 4571 6153 -1 2208 105 0 45 chr5 140228650 140228828 -62856704 + AluSx SINE Alu 139 299 -13 2549 49 0 3 chr5 140229857 140230162 -62855370 - AluY SINE Alu -7 304 1 2792 224 29 13 chr5 140231005 140231618 -62853914 + L1ME1 LINE L1 5539 6161 -5 2292 153 34 27 chr5 140231738 140232287 -62853245 - MLT2A2 LTR ERVL 0 554 2 184 374 29 23 chr5 140233308 140233482 -62852050 - L2 LINE L2 -1304 2010 1836 509 289 106 14 chr5 140233803 140234064 -62851468 + L1MC4a LINE L1 5722 6025 -96 184 206 0 0 chr5 140234397 140234431 -62851101 - L2 LINE L2 -211 3061 3028 32 101 0 0 chr5 140237052 140237161 -62848371 + AT_rich Low_complexity Low_complexity 1 109 0 655 61 0 1 chr5 140237777 140238022 -62847510 - AluY SINE Alu 0 311 35 2324 103 0 0 chr5 140238048 140238340 -62847192 + AluSg SINE Alu 1 292 -18 865 239 74 12 chr5 140238614 140238857 -62846675 + L2 LINE L2 2432 2689 -625 205 330 76 8 chr5 140240098 140240216 -62845316 + L2 LINE L2 3146 3271 -1 2285 26 44 4 chr5 140240288 140240561 -62844971 + AluY SINE Alu 1 284 -27 1988 46 8 0 chr5 140240561 140240801 -62844731 + AluY SINE Alu 1 242 -69 2284 116 3 0 chr5 140242224 140242526 -62843006 - AluSx SINE Alu -9 303 1 1100 213 43 53 chr5 140242810 140243011 -62842521 - Charlie7 DNA MER1_type -6 2606 2409 2260 93 10 3 chr5 140243011 140243312 -62842220 + AluSx SINE Alu 1 303 -9 1100 213 43 53 chr5 140243312 140243505 -62842027 - Charlie7 DNA MER1_type -203 2409 2216 * 4696 213 103 61 chr5 140243502 140245274 -62840258 - Charlie7 DNA MER1_type -732 1880 35 468 0 0 0 chr5 140245971 140246023 -62839509 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 1468 148 154 48 chr5 140247805 140248137 -62837395 + L1MB2 LINE L1 5796 6162 -9 24 0 0 0 chr5 140248137 140248161 -62837371 + AT_rich Low_complexity Low_complexity 1 24 0 235 161 143 0 chr5 140248702 140248758 -62836774 - MER4D LTR ERV1 -480 423 360 5552 146 39 15 chr5 140250788 140252214 -62833318 + L1MA5A LINE L1 4791 6296 -1 3059 161 55 13 chr5 140252815 140253343 -62832189 + MER44D DNA MER2_type 1 605 0 21 0 0 0 chr5 140253380 140253401 -62832131 + AT_rich Low_complexity Low_complexity 1 21 0 7512 42 14 13 chr5 140253415 140254362 -62831170 + L1PA6 LINE L1 5203 6150 -4 1661 131 175 13 chr5 140254499 140254813 -62830719 - MER47A DNA MER2_type 0 366 2 180 179 0 0 chr5 140255039 140255078 -62830454 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 1047 263 56 35 chr5 140255084 140255179 -62830353 - L2 LINE L2 -79 3234 3142 2204 119 0 0 chr5 140255179 140255503 -62830029 + AluSx SINE Alu 1 312 0 1047 263 56 35 chr5 140255503 140255890 -62829642 - L2 LINE L2 -171 3142 2740 301 286 63 40 chr5 140255865 140255991 -62829541 + MIR3 SINE MIR 13 141 -67 * 23 33 0 0 chr5 140256054 140256084 -62829448 + AT_rich Low_complexity Low_complexity 1 30 0 258 154 0 0 chr5 140256449 140256488 -62829044 + MLT1L LTR MaLR 43 81 -534 668 245 75 24 chr5 140256688 140256900 -62828632 + MLT1L LTR MaLR 362 584 -31 1946 174 71 31 chr5 140257517 140257659 -62827873 + MLT1A1 LTR MaLR 1 136 -229 1743 192 7 0 chr5 140257659 140257989 -62827543 + AluJb SINE Alu 1 312 0 1946 174 71 31 chr5 140257989 140258197 -62827335 + MLT1A1 LTR MaLR 136 365 0 1023 220 94 22 chr5 140260250 140260473 -62825059 + MER8 DNA MER2_type 1 239 0 26 30 0 0 chr5 140260473 140260506 -62825026 + AT_rich Low_complexity Low_complexity 1 33 0 2105 119 3 3 chr5 140260539 140260888 -62824644 + AluSx SINE Alu 1 349 0 235 296 45 34 chr5 140261557 140261645 -62823887 - L2 LINE L2 -187 3085 2997 183 80 0 0 chr5 140262399 140262424 -62823108 + (A)n Simple_repeat Simple_repeat 1 25 0 216 229 64 64 chr5 140263807 140263916 -62821616 + MIR SINE MIR 104 212 -50 443 318 15 51 chr5 140264919 140265114 -62820418 + MER5A DNA MER1_type 1 188 -1 312 317 0 0 chr5 140266300 140266404 -62819128 + (CATATA)n Simple_repeat Simple_repeat 5 108 0 2258 62 22 0 chr5 140269428 140269727 -62815805 - AluY SINE Alu 0 305 1 258 176 0 0 chr5 140271216 140271267 -62814265 + CT-rich Low_complexity Low_complexity 1 51 0 1877 151 0 0 chr5 140271272 140271550 -62813982 - AluSx SINE Alu -34 278 1 2228 132 0 0 chr5 140271892 140272196 -62813336 - AluSx SINE Alu -8 304 1 281 323 38 23 chr5 140272196 140272329 -62813203 + MIR SINE MIR 40 174 -88 270 294 66 6 chr5 140272739 140272863 -62812669 - MIR SINE MIR -62 146 60 419 358 42 0 chr5 140273420 140273585 -62811947 - MIR SINE MIR -56 206 35 988 106 121 0 chr5 140273712 140273853 -62811679 - AluSg/x SINE Alu -14 296 139 2216 101 0 7 chr5 140273856 140274180 -62811352 - AluSq SINE Alu 0 313 1 397 222 95 24 chr5 140275241 140275367 -62810165 - MIR SINE MIR -48 214 80 21 0 0 0 chr5 140275525 140275546 -62809986 + AT_rich Low_complexity Low_complexity 1 21 0 300 341 28 28 chr5 140275567 140275743 -62809789 + MER5B DNA MER1_type 2 177 -1 183 309 0 0 chr5 140276095 140276137 -62809395 - L2 LINE L2 0 3272 3231 1073 121 37 37 chr5 140276281 140276471 -62809061 + L1MB8 LINE L1 5707 5896 -282 2332 125 41 33 chr5 140276471 140276494 -62809038 + L1MB8 LINE L1 5774 5795 -383 180 0 0 0 chr5 140276494 140276514 -62809018 + (TTA)n Simple_repeat Simple_repeat 1 20 0 2332 125 41 33 chr5 140276514 140276878 -62808654 + L1MB8 LINE L1 5795 6167 -11 387 0 0 0 chr5 140276886 140276929 -62808603 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 222 301 53 60 chr5 140276936 140277069 -62808463 - L2 LINE L2 -174 3098 2967 279 264 87 87 chr5 140277166 140277408 -62808124 - L2 LINE L2 -492 2822 2581 771 96 19 173 chr5 140277444 140277600 -62807932 - FLAM_C SINE Alu -1 132 1 329 286 20 40 chr5 140278848 140279019 -62806513 + MIR SINE MIR 42 204 -58 22 0 0 0 chr5 140281426 140281448 -62804084 + AT_rich Low_complexity Low_complexity 1 22 0 859 126 0 15 chr5 140281871 140282006 -62803526 - FLAM_C SINE Alu 0 133 1 2161 174 89 30 chr5 140282260 140282732 -62802800 - MLT1D LTR MaLR 0 505 6 391 265 20 39 chr5 140282874 140282976 -62802556 + L2 LINE L2 3175 3274 -39 185 331 83 83 chr5 140283174 140283549 -62801983 + L2 LINE L2 2229 2603 -711 405 0 0 0 chr5 140285337 140285382 -62800150 + (CA)n Simple_repeat Simple_repeat 2 46 0 434 323 98 33 chr5 140286312 140286742 -62798790 + L2 LINE L2 2775 3228 -44 1839 209 183 75 chr5 140286758 140287348 -62798184 - MLT1E1 LTR MaLR 0 654 1 746 194 73 0 chr5 140287437 140287561 -62797971 - FLAM_A SINE Alu 0 133 1 549 233 62 34 chr5 140287650 140287826 -62797706 + MIR3 SINE MIR 14 194 -14 234 176 15 29 chr5 140290445 140290513 -62795019 + T-rich Low_complexity Low_complexity 5 71 0 4149 62 0 0 chr5 140290532 140291028 -62794504 - L1PA6 LINE L1 -8 6146 5651 5251 48 0 0 chr5 140291332 140292235 -62793297 - L1PA6 LINE L1 -506 5648 4746 1848 49 0 0 chr5 140292236 140292461 -62793071 + L1PA6 LINE L1 4530 4754 -1392 319 298 257 23 chr5 140293126 140293344 -62792188 + MLT1K LTR MaLR 2 270 -318 2514 115 19 25 chr5 140293404 140293770 -62791762 - THE1B LTR MaLR 0 364 1 3470 170 12 68 chr5 140294635 140295136 -62790396 - MER82 DNA MER2_type -1 652 197 2647 106 38 0 chr5 140295136 140295503 -62790029 - L1PA15 LINE L1 -3 6162 5782 3470 170 12 68 chr5 140295503 140295678 -62789854 - MER82 DNA MER2_type -456 197 14 1938 169 3 6 chr5 140296536 140296849 -62788683 + AluJb SINE Alu 1 312 0 2278 93 27 0 chr5 140296954 140297255 -62788277 + AluSp SINE Alu 1 309 -4 206 333 64 28 chr5 140297694 140297835 -62787697 + L2 LINE L2 2826 2971 -343 441 190 147 26 chr5 140297975 140298091 -62787441 + L2 LINE L2 3172 3301 -12 245 293 120 47 chr5 140302761 140302911 -62782621 - L2 LINE L2 -557 2757 2597 350 328 56 8 chr5 140302913 140303038 -62782494 - L2 LINE L2 -2 3311 3181 1914 299 140 26 chr5 140303164 140304047 -62781485 - L2 LINE L2 -357 2957 1974 216 271 171 29 chr5 140306899 140306969 -62778563 - MIR3 SINE MIR -17 191 112 421 338 43 7 chr5 140308173 140308312 -62777220 - L2 LINE L2 -22 3250 3107 23 33 0 0 chr5 140308936 140308966 -62776566 + AT_rich Low_complexity Low_complexity 1 30 0 211 267 171 66 chr5 140311150 140311543 -62773989 - L2 LINE L2 -337 2977 2544 507 269 194 0 chr5 140311564 140311750 -62773782 - MIR SINE MIR -6 256 35 2003 114 48 0 chr5 140313015 140313283 -62772249 + AluSq SINE Alu 2 286 -27 181 0 0 0 chr5 140313283 140313303 -62772229 + (CAAAA)n Simple_repeat Simple_repeat 1 170 0 2003 114 48 0 chr5 140313303 140313323 -62772209 + AluSq SINE Alu 286 304 -9 278 263 26 97 chr5 140314940 140315054 -62770478 - MIR SINE MIR -40 222 117 2137 130 3 0 chr5 140315746 140316046 -62769486 - AluSq SINE Alu -8 305 5 2297 110 0 0 chr5 140316063 140316372 -62769160 - AluSx SINE Alu -3 309 1 215 191 0 32 chr5 140316531 140316594 -62768938 + (TA)n Simple_repeat Simple_repeat 1 61 0 330 237 99 79 chr5 140317324 140317577 -62767955 - L2 LINE L2 -210 3062 2805 1979 182 53 31 chr5 140317965 140318421 -62767111 - MLT1C LTR MaLR 0 467 2 5487 113 16 6 chr5 140318556 140319359 -62766173 + L1PA16 LINE L1 5356 6166 0 372 75 94 0 chr5 140319627 140319680 -62765852 + L1P4 LINE L1 5580 5637 -529 207 88 0 0 chr5 140319685 140319719 -62765813 + (TGGGGG)n Simple_repeat Simple_repeat 1 34 0 318 98 0 0 chr5 140321850 140321901 -62763631 + (TG)n Simple_repeat Simple_repeat 2 52 0 307 263 73 58 chr5 140323001 140323138 -62762394 - MIR3 SINE MIR -57 151 13 229 317 61 12 chr5 140323429 140323511 -62762021 + LTR67 LTR ERVL 147 232 -325 401 273 67 24 chr5 140323677 140323842 -62761690 + LTR67 LTR ERVL 383 554 -3 217 263 132 13 chr5 140323985 140324061 -62761471 + L2 LINE L2 3229 3313 0 278 259 38 76 chr5 140324734 140324865 -62760667 - MIR SINE MIR -67 195 70 2022 102 65 0 chr5 140324919 140325194 -62760338 - AluSg SINE Alu -17 293 1 485 307 270 15 chr5 140325482 140325889 -62759643 + L3 LINE CR1 1016 1526 -51 250 354 21 28 chr5 140326126 140326270 -62759262 + Charlie7 DNA MER1_type 183 325 -2287 666 207 99 31 chr5 140326327 140326549 -62758983 + Charlie7 DNA MER1_type 1508 1744 -868 573 231 65 6 chr5 140326553 140326722 -62758810 - MIR SINE MIR -31 231 53 2296 217 81 49 chr5 140326762 140327579 -62757953 + Charlie7 DNA MER1_type 1770 2612 0 2159 133 13 46 chr5 140329308 140329699 -62755833 + MLT1B LTR MaLR 7 384 -6 2174 127 0 0 chr5 140330305 140330604 -62754928 - AluSx SINE Alu -13 299 1 201 274 0 0 chr5 140330966 140331017 -62754515 - L2 LINE L2 -1 3312 3262 647 279 130 14 chr5 140331113 140331321 -62754211 - MIR SINE MIR -10 252 21 275 353 102 21 chr5 140332027 140332214 -62753318 - MIR SINE MIR -2 260 59 607 256 26 62 chr5 140332617 140332844 -62752688 + LTR16A1 LTR ERVL 225 443 -14 466 248 70 0 chr5 140333049 140333178 -62752354 + MIR SINE MIR 76 213 -49 183 42 0 0 chr5 140334060 140334084 -62751448 + (TC)n Simple_repeat Simple_repeat 1 24 0 2619 48 0 13 chr5 140336509 140336822 -62748710 - AluY SINE Alu -2 309 1 337 291 19 18 chr5 140337602 140337719 -62747813 + MIR SINE MIR 32 148 -62 360 332 160 43 chr5 140338136 140339103 -62746429 + L2 LINE L2 2185 3272 0 24 32 0 0 chr5 140339854 140339885 -62745647 + AT_rich Low_complexity Low_complexity 1 31 0 44688 42 1 1 chr5 140340194 140346345 -62739187 - L1PA3 LINE L1 -3 6152 2 2031 279 119 33 chr5 140346712 140347173 -62738359 + L2 LINE L2 1870 2290 -1023 1978 152 20 3 chr5 140347173 140347476 -62738056 - AluSx SINE Alu -4 308 1 2031 279 119 33 chr5 140347476 140348351 -62737181 + L2 LINE L2 2290 3313 0 5638 165 26 15 chr5 140348369 140350341 -62735191 + L1PA16 LINE L1 4133 6153 -13 2197 136 7 0 chr5 140350342 140350652 -62734880 - AluJb SINE Alu 0 312 1 1149 251 145 58 chr5 140351992 140352419 -62733113 + LTR16B LTR ERVL 1 464 0 3834 330 65 37 chr5 140352421 140355472 -62730060 + HERV16 LTR ERVL 3 2969 -2027 1991 173 58 24 chr5 140355472 140355853 -62729679 + MSTD LTR MaLR 3 396 0 3834 330 65 37 chr5 140355853 140357204 -62728328 + HERV16 LTR ERVL 2969 4282 -714 2799 110 3 3 chr5 140357204 140357568 -62727964 - THE1B LTR MaLR 0 364 1 10775 110 39 39 chr5 140357568 140359149 -62726383 - THE1B-int LTR MaLR 0 1580 1 2639 119 5 24 chr5 140359149 140359520 -62726012 - THE1B LTR MaLR 0 364 1 3834 330 65 37 chr5 140359520 140359802 -62725730 + HERV16 LTR ERVL 4282 4555 -441 2330 70 0 10 chr5 140359802 140360103 -62725429 - AluY SINE Alu -13 298 1 3834 330 65 37 chr5 140360103 140360491 -62725041 + HERV16 LTR ERVL 4555 4952 -44 10221 36 3 0 chr5 140360963 140362903 -62722629 + L1PA4 LINE L1 4219 6152 -3 24 53 0 0 chr5 140363299 140363337 -62722195 + AT_rich Low_complexity Low_complexity 1 38 0 341 242 83 167 chr5 140364337 140364456 -62721076 - L2 LINE L2 -1 3271 3144 714 209 86 6 chr5 140364456 140364619 -62720913 - MER69A DNA AcHobo -1 176 1 341 242 83 167 chr5 140364619 140364871 -62720661 - L2 LINE L2 -128 3144 2931 243 344 204 9 chr5 140365057 140365802 -62719730 - L2 LINE L2 -653 2661 1772 1591 139 85 24 chr5 140367307 140367446 -62718086 + MSTA LTR MaLR 1 130 -298 339 44 0 0 chr5 140367446 140367491 -62718041 + (TC)n Simple_repeat Simple_repeat 2 46 0 1591 139 85 24 chr5 140367491 140367662 -62717870 + MSTA LTR MaLR 130 289 -139 420 71 0 0 chr5 140367662 140367718 -62717814 + (TA)n Simple_repeat Simple_repeat 1 56 0 2295 89 7 20 chr5 140367719 140368022 -62717510 - AluSq SINE Alu -14 299 1 1591 139 85 24 chr5 140368022 140368061 -62717471 + MSTA LTR MaLR 288 428 0 772 266 29 90 chr5 140368360 140368739 -62716793 + MLT1J LTR MaLR 156 511 0 32 26 0 0 chr5 140368790 140368829 -62716703 + AT_rich Low_complexity Low_complexity 1 39 0 1540 296 65 7 chr5 140369296 140369851 -62715681 + MER69B DNA AcHobo 1 587 -639 824 159 25 6 chr5 140369865 140370022 -62715510 - L1MB3 LINE L1 -10 6173 6014 481 156 0 11 chr5 140370027 140370117 -62715415 + L1MB2 LINE L1 5889 5977 -194 1908 155 8 6 chr5 140370119 140370474 -62715058 - L1MB3 LINE L1 -178 6005 5650 2152 183 41 8 chr5 140370482 140370974 -62714558 + MER69B DNA AcHobo 576 1083 -143 1087 30 15 0 chr5 140370974 140371107 -62714425 - BC200 scRNA scRNA -65 135 1 462 222 62 0 chr5 140371108 140371252 -62714280 + MER69B DNA AcHobo 1073 1225 -1 417 303 38 43 chr5 140371992 140372177 -62713355 - MIR3 SINE MIR -7 201 18 235 275 13 141 chr5 140372397 140372546 -62712986 - L2 LINE L2 -1 3271 3142 1929 158 12 6 chr5 140374500 140374836 -62710696 - L1MB5 LINE L1 0 6174 5837 261 237 21 65 chr5 140375079 140375172 -62710360 + MLT1K LTR MaLR 110 198 -390 344 253 101 34 chr5 140375289 140375467 -62710065 + MLT1K LTR MaLR 378 567 -21 198 0 0 0 chr5 140375624 140375646 -62709886 + (T)n Simple_repeat Simple_repeat 1 22 0 409 224 73 31 chr5 140375673 140375865 -62709667 + L1M4 LINE L1 2461 2660 -3486 * 3757 231 100 30 chr5 140375843 140377438 -62708094 - L1MEc LINE L1 -4111 2285 578 682 294 189 6 chr5 140377461 140377784 -62707748 - L1MEc LINE L1 -5882 514 133 267 244 0 13 chr5 140377801 140377879 -62707653 + L1MDa LINE L1 321 397 -6143 2106 199 48 40 chr5 140378014 140378282 -62707250 + L1MDa LINE L1 587 851 -5689 1630 166 17 37 chr5 140378282 140378578 -62706954 - AluJo SINE Alu -17 295 6 2106 199 48 40 chr5 140378578 140378958 -62706574 + L1MDa LINE L1 851 1551 -4989 759 146 60 4 chr5 140379007 140379242 -62706290 + L1M4 LINE L1 5207 5456 -735 258 31 0 0 chr5 140379280 140379312 -62706220 + L1M4 LINE L1 5563 5594 -580 180 0 0 0 chr5 140379617 140379637 -62705895 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 21 82 0 0 chr5 140381128 140381177 -62704355 + AT_rich Low_complexity Low_complexity 1 49 0 2267 184 47 11 chr5 140381856 140382307 -62703225 + MLT1C LTR MaLR 1 467 0 6780 29 2 0 chr5 140382688 140383525 -62702007 + L1PA4 LINE L1 5333 6155 0 3111 50 3 0 chr5 140383525 140383906 -62701626 + L1PA5 LINE L1 5770 6154 0 4710 151 27 55 chr5 140383983 140384346 -62701186 - L1MA9 LINE L1 -5 6307 5935 2480 108 101 0 chr5 140384346 140384734 -62700798 - MSTA LTR MaLR -1 427 1 4710 151 27 55 chr5 140384734 140384895 -62700637 - L1MA9 LINE L1 -377 5935 5771 2360 97 0 0 chr5 140384895 140385205 -62700327 - AluY SINE Alu -1 310 1 4710 151 27 55 chr5 140385205 140385797 -62699735 - L1MA9 LINE L1 -541 5771 5215 764 175 76 64 chr5 140385958 140386129 -62699403 + MER5B DNA MER1_type 3 175 -3 451 297 104 70 chr5 140386752 140387126 -62698406 + L2 LINE L2 2571 2957 -357 187 75 0 50 chr5 140387330 140387370 -62698162 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 4974 157 24 47 chr5 140388131 140388448 -62697084 - L1MC1 LINE L1 0 6333 6010 2318 89 3 0 chr5 140388448 140388739 -62696793 + AluSp SINE Alu 4 295 -18 4974 157 24 47 chr5 140388739 140388982 -62696550 - L1MC1 LINE L1 -323 6010 5763 2540 167 32 0 chr5 140388982 140389425 -62696107 - MSTB2 LTR MaLR 0 457 1 4974 157 24 47 chr5 140389425 140389894 -62695638 - L1MC1 LINE L1 -570 5763 5325 198 0 0 0 chr5 140389903 140389925 -62695607 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1977 166 0 0 chr5 140389925 140390210 -62695322 - AluSx SINE Alu -24 288 1 4974 157 24 47 chr5 140390210 140390232 -62695300 - L1MC1 LINE L1 -1008 5325 5304 750 222 67 17 chr5 140390233 140390413 -62695119 - AluJb SINE Alu -4 308 120 6590 169 19 20 chr5 140390449 140392206 -62693326 - L1PA11 LINE L1 0 7612 5853 2191 134 0 6 chr5 140392206 140392519 -62693013 + AluSx SINE Alu 1 311 -1 6590 169 19 20 chr5 140392519 140393706 -62691826 - L1PA11 LINE L1 -1759 5853 4665 1971 100 4 11 chr5 140393706 140393976 -62691556 - AluSp SINE Alu -5 308 41 2044 144 0 0 chr5 140393976 140394254 -62691278 - AluSc SINE Alu -31 278 1 6590 169 19 20 chr5 140394254 140396979 -62688553 - L1PA11 LINE L1 -2946 4666 1937 2825 16 0 0 chr5 140396979 140397288 -62688244 + AluYb8 SINE Alu 1 309 -9 6590 169 19 20 chr5 140397288 140397412 -62688120 - L1PA11 LINE L1 -5675 1937 1814 318 50 0 0 chr5 140397412 140397452 -62688080 + (CA)n Simple_repeat Simple_repeat 2 41 0 6590 169 19 20 chr5 140397452 140398314 -62687218 - L1PA11 LINE L1 -5798 1814 1 1814 183 49 15 chr5 140398348 140399017 -62686515 - L1MC1 LINE L1 -855 5291 4561 566 298 64 45 chr5 140399025 140400386 -62685146 - L1ME LINE L1 -684 5437 4057 415 324 48 41 chr5 140401421 140401860 -62683672 + HAL1b LINE L1 61 502 -846 1791 165 31 9 chr5 140401971 140402298 -62683234 - MER7A DNA MER2_type -1 345 14 1030 285 89 47 chr5 140402382 140402979 -62682553 + L1M4 LINE L1 2682 3303 -2843 1497 193 67 4 chr5 140403038 140403308 -62682224 + AluJo SINE Alu 1 287 -25 296 106 75 0 chr5 140403310 140403404 -62682128 + (TA)n Simple_repeat Simple_repeat 1 101 0 473 320 39 34 chr5 140403562 140403946 -62681586 + L1M4 LINE L1 3544 3929 -2217 1367 208 107 59 chr5 140404004 140404481 -62681051 - MLT1D LTR MaLR -5 500 1 487 311 71 38 chr5 140404481 140405303 -62680229 + L1M4 LINE L1 3984 4832 -1314 1333 214 47 30 chr5 140405651 140406057 -62679475 + MER63C DNA MER1_type 49 461 -469 655 33 56 0 chr5 140406089 140406179 -62679353 - L1PB1 LINE L1 -1 6150 6056 3410 148 19 8 chr5 140406188 140406204 -62679328 - L1P5 LINE L1 -360 5791 5777 306 0 0 0 chr5 140406204 140406238 -62679294 + (CA)n Simple_repeat Simple_repeat 2 35 0 3410 148 19 8 chr5 140406238 140407220 -62678312 - L1P5 LINE L1 -374 5777 4785 571 135 39 0 chr5 140410140 140410244 -62675288 - L1 LINE L1 -1359 4787 4680 * 10330 212 17 21 chr5 140410220 140411498 -62674034 - L1P5 LINE L1 -1659 4487 3206 2462 84 0 7 chr5 140411498 140411808 -62673724 - AluY SINE Alu -3 308 1 10330 212 17 21 chr5 140411808 140413728 -62671804 - L1P5 LINE L1 -2940 3206 1306 242 258 0 0 chr5 140414149 140414211 -62671321 + MER63C DNA MER1_type 465 526 -404 986 189 21 0 chr5 140414216 140414407 -62671125 - MER58A DNA MER1_type -16 208 14 1688 223 11 3 chr5 140414416 140414798 -62670734 + MER63C DNA MER1_type 520 904 -26 330 294 50 54 chr5 140414825 140415046 -62670486 + L1M4 LINE L1 4954 5173 -973 873 159 0 0 chr5 140415131 140415257 -62670275 + FRAM SINE Alu 23 172 0 184 42 0 0 chr5 140415257 140415281 -62670251 + (CAA)n Simple_repeat Simple_repeat 2 180 0 514 250 166 30 chr5 140415284 140415939 -62669593 - L1MEc LINE L1 -2589 3557 2814 1566 180 7 27 chr5 140415979 140416274 -62669258 + AluJo SINE Alu 3 291 -21 469 291 123 33 chr5 140417056 140417419 -62668113 - L1MEc LINE L1 -3678 2468 2110 235 108 0 0 chr5 140417628 140417665 -62667867 + MLT2F LTR ERVL 617 653 -10 228 319 111 5 chr5 140417725 140417881 -62667651 + HAL1 LINE L1 1395 1580 -927 1885 168 0 7 chr5 140417881 140418178 -62667354 + AluJb SINE Alu 1 295 -17 228 319 111 5 chr5 140418178 140418228 -62667304 + HAL1 LINE L1 1580 1623 -884 1322 232 45 14 chr5 140418479 140418974 -62666558 - MLT2F LTR ERVL -67 596 5 623 89 43 0 chr5 140419257 140419361 -62666171 - LTR12 LTR ERV1 -548 166 86 5236 94 109 0 chr5 140419671 140420416 -62665116 + LTR12 LTR ERV1 1 826 0 1127 247 90 93 chr5 140421100 140421926 -62663606 - HAL1 LINE L1 -21 2486 1664 666 241 70 0 chr5 140422478 140422677 -62662855 - HAL1 LINE L1 -854 1653 1441 1534 180 50 18 chr5 140422756 140423034 -62662498 - AluJo SINE Alu -24 288 2 1168 134 37 0 chr5 140423406 140423593 -62661939 + AluSg/x SINE Alu 119 312 0 186 133 0 0 chr5 140426750 140426780 -62658752 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 299 299 40 90 chr5 140426871 140427048 -62658484 + MER5B DNA MER1_type 7 174 -4 848 287 30 4 chr5 140427169 140427406 -62658126 + MIR SINE MIR 18 260 -2 228 154 0 77 chr5 140427426 140427478 -62658054 - L3 LINE CR1 -5 1572 1525 188 216 0 78 chr5 140427480 140427531 -62658001 - MIR SINE MIR -98 164 118 272 300 0 14 chr5 140427594 140427664 -62657868 - MIR SINE MIR 0 262 194 609 234 156 0 chr5 140427678 140427832 -62657700 - MER5A DNA MER1_type -3 186 9 185 260 0 0 chr5 140427840 140427890 -62657642 - MIR SINE MIR -74 188 139 295 289 20 47 chr5 140428406 140428555 -62656977 - LTR16B LTR ERVL -1 463 319 306 351 131 0 chr5 140429176 140429352 -62656180 + MIR SINE MIR 1 197 -11 833 208 12 12 chr5 140429538 140429706 -62655826 - FAM SINE Alu -4 171 4 330 290 130 0 chr5 140430869 140430969 -62654563 - MER81 DNA DNA 0 114 2 474 343 28 36 chr5 140431084 140431335 -62654197 - MLT1K LTR MaLR -325 263 15 392 221 10 29 chr5 140431940 140432044 -62653488 + L1MB1 LINE L1 1599 1700 -5786 5056 233 61 20 chr5 140432074 140434174 -62651358 + L1MB1 LINE L1 2923 5109 -2456 36931 79 10 9 chr5 140434192 140440335 -62645197 + L1PA6 LINE L1 11 6153 -1 4873 180 115 47 chr5 140440326 140442558 -62642974 + L1MB1 LINE L1 5193 7585 -2 * 364 278 86 39 chr5 140442985 140443240 -62642292 - L1ME4a LINE L1 -4 6117 5851 2008 150 83 3 chr5 140444178 140444551 -62640981 + MSTA LTR MaLR 26 428 0 408 258 31 25 chr5 140445237 140445400 -62640132 + L1MC4a LINE L1 5800 5963 -1845 1930 153 150 3 chr5 140446450 140446823 -62638709 - MSTC LTR MaLR 0 428 1 414 0 0 0 chr5 140446965 140447011 -62638521 + (CA)n Simple_repeat Simple_repeat 2 47 0 32 0 0 0 chr5 140450092 140450124 -62635408 + AT_rich Low_complexity Low_complexity 1 32 0 5830 109 9 13 chr5 140450129 140450900 -62634632 - L1PA16 LINE L1 -9 6157 5405 2222 91 10 7 chr5 140450900 140451197 -62634335 - AluSx SINE Alu -14 298 1 5830 109 9 13 chr5 140451197 140451963 -62633569 - L1PA16 LINE L1 -761 5405 4637 2361 99 0 10 chr5 140451983 140452297 -62633235 + AluSx SINE Alu 1 311 -1 2120 159 76 25 chr5 140452495 140452930 -62632602 + MSTB2 LTR MaLR 1 457 0 24 0 0 0 chr5 140452936 140452960 -62632572 + AT_rich Low_complexity Low_complexity 1 24 0 188 158 0 26 chr5 140453160 140453198 -62632334 + L3 LINE CR1 283 319 -1258 867 291 66 43 chr5 140453198 140453682 -62631850 - MLT1J LTR MaLR -16 495 1 856 285 201 27 chr5 140454737 140455144 -62630388 + L3 LINE CR1 399 876 -701 219 351 105 18 chr5 140455200 140455314 -62630218 - MIR SINE MIR -61 147 24 30 69 0 0 chr5 140455483 140455541 -62629991 + AT_rich Low_complexity Low_complexity 1 58 0 1441 324 38 34 chr5 140455608 140456440 -62629092 - L2 LINE L2 -213 3059 2232 573 324 36 6 chr5 140456537 140456762 -62628770 + MIR SINE MIR 36 262 0 10628 150 14 23 chr5 140456982 140459768 -62625764 + L1PA14 LINE L1 3418 6161 0 934 182 0 25 chr5 140459768 140459949 -62625583 + AluJb SINE Alu 136 314 0 262 325 35 9 chr5 140459952 140460066 -62625466 + L3 LINE CR1 1288 1404 -173 521 289 108 73 chr5 140461515 140462107 -62623425 + MLT1L LTR MaLR 3 615 0 1515 67 0 0 chr5 140462161 140462355 -62623177 + L1PA6 LINE L1 5955 6148 -6 399 272 92 49 chr5 140463037 140463221 -62622311 - HAL1 LINE L1 -920 1587 1396 2321 132 19 21 chr5 140463327 140463753 -62621779 - L1MB7 LINE L1 -27 6157 5724 252 81 0 0 chr5 140463942 140463979 -62621553 - tRNA-Met-e tRNA tRNA -38 37 1 1376 174 12 46 chr5 140464057 140464316 -62621216 + AluJo SINE Alu 1 250 -62 2412 79 10 0 chr5 140464509 140464813 -62620719 - AluY SINE Alu -4 307 1 237 191 263 7 chr5 140466095 140466194 -62619338 + MIR SINE MIR 50 170 -60 321 242 71 20 chr5 140467670 140467769 -62617763 - MIR SINE MIR -44 218 115 776 277 231 29 chr5 140468006 140468754 -62616778 + L2 LINE L2 2396 3313 0 518 293 91 37 chr5 140471038 140471502 -62614030 - MLT1J LTR MaLR -22 489 1 2289 106 0 7 chr5 140471885 140472188 -62613344 - AluSx SINE Alu -11 301 1 2385 82 0 0 chr5 140473021 140473313 -62612219 - AluSc SINE Alu -17 292 1 798 233 53 10 chr5 140473314 140473520 -62612012 - MER58A DNA MER1_type -9 215 1 379 367 71 26 chr5 140473566 140473833 -62611699 + L2 LINE L2 2824 3102 -170 2047 129 10 0 chr5 140474257 140474551 -62610981 + AluSg SINE Alu 1 297 -13 211 269 0 30 chr5 140474820 140474887 -62610645 + CT-rich Low_complexity Low_complexity 3 67 0 357 24 0 0 chr5 140475072 140475114 -62610418 + (TA)n Simple_repeat Simple_repeat 1 42 0 2058 138 0 0 chr5 140475115 140475398 -62610134 - AluSx SINE Alu -29 283 1 25 0 0 0 chr5 140475404 140475429 -62610103 + AT_rich Low_complexity Low_complexity 1 25 0 481 237 214 9 chr5 140475488 140475703 -62609829 - MIR SINE MIR -1 261 3 1416 213 69 23 chr5 140475976 140476408 -62609124 + L1MC4 LINE L1 7380 7831 -211 360 0 0 0 chr5 140476419 140476459 -62609073 + (CA)n Simple_repeat Simple_repeat 2 41 0 305 152 33 11 chr5 140476481 140476573 -62608959 + (TA)n Simple_repeat Simple_repeat 1 94 0 313 240 20 34 chr5 140476671 140476817 -62608715 + L1MC5 LINE L1 7769 7912 -49 189 291 31 47 chr5 140476955 140477082 -62608450 + L2 LINE L2 2622 2746 -568 333 349 60 67 chr5 140477170 140477468 -62608064 + L2 LINE L2 2916 3211 -61 710 243 90 18 chr5 140478212 140478434 -62607098 - MLT1K LTR MaLR 0 588 351 270 93 0 0 chr5 140478682 140478725 -62606807 - MADE1 DNA Mariner 0 80 38 21 0 0 0 chr5 140480027 140480048 -62605484 + AT_rich Low_complexity Low_complexity 1 21 0 2300 103 7 0 chr5 140480958 140481260 -62604272 + AluSp SINE Alu 2 305 -8 308 70 56 113 chr5 140481359 140481430 -62604102 + AluSc SINE Alu 233 299 0 274 334 82 21 chr5 140481450 140481875 -62603657 + HAL1 LINE L1 1234 1684 -823 7103 58 8 0 chr5 140481978 140483657 -62601875 + L1PA7 LINE L1 4471 6154 0 285 132 84 17 chr5 140483751 140484052 -62601480 + (TA)n Simple_repeat Simple_repeat 1 321 0 1527 6 0 0 chr5 140484362 140484534 -62600998 + (GAA)n Simple_repeat Simple_repeat 3 174 0 320 345 80 27 chr5 140484610 140484975 -62600557 + L1ME LINE L1 49 432 -5964 405 301 83 40 chr5 140485349 140485903 -62599629 + L1ME LINE L1 786 1363 -5033 1352 251 36 85 chr5 140485918 140486751 -62598781 + L1ME LINE L1 1615 2357 -3858 1029 216 78 85 chr5 140486751 140487150 -62598382 - MSTD LTR MaLR 0 396 1 1352 251 36 85 chr5 140487150 140487321 -62598211 + L1ME LINE L1 2357 2535 -3680 451 281 101 46 chr5 140487377 140488121 -62597411 + L1ME LINE L1 3885 4669 -1546 825 251 16 0 chr5 140488373 140488564 -62596968 + MIR SINE MIR 69 262 0 337 318 91 44 chr5 140488566 140488950 -62596582 + L1ME LINE L1 4929 5330 -885 759 326 36 30 chr5 140488958 140489492 -62596040 + L1ME LINE L1 5357 5893 -297 335 325 175 17 chr5 140489974 140490214 -62595318 + L1MEc LINE L1 3693 3970 -2245 704 311 94 51 chr5 140490413 140490998 -62594534 + L1MEc LINE L1 4114 4723 -1492 649 247 48 65 chr5 140490998 140491431 -62594101 - HAL1 LINE L1 0 2507 2082 2317 99 3 0 chr5 140491573 140491867 -62593665 + AluSx SINE Alu 1 295 -17 2080 183 74 128 chr5 140491893 140492660 -62592872 - LTR8A LTR ERV1 -1 726 1 580 303 41 15 chr5 140492711 140492982 -62592550 - HAL1 LINE L1 -547 1960 1683 817 187 48 61 chr5 140493515 140493745 -62591787 + MER31A LTR ERV1 258 484 -1 2509 160 117 69 chr5 140493821 140494572 -62590960 - LTR48 LTR ERV1 0 787 1 453 50 0 0 chr5 140494595 140494655 -62590877 - MER4D LTR ERV1 0 872 813 484 89 51 0 chr5 140494655 140494734 -62590798 - MER4D LTR ERV1 -19 853 771 1138 222 133 33 chr5 140495616 140495976 -62589556 + MSTD LTR MaLR 1 396 0 303 312 42 58 chr5 140496823 140496918 -62588614 - MLT1L LTR MaLR -1 614 522 2405 88 0 10 chr5 140496918 140497258 -62588274 + AluSx SINE Alu 1 312 0 303 312 42 58 chr5 140497258 140497351 -62588181 - MLT1L LTR MaLR -93 522 429 486 234 95 15 chr5 140497479 140497616 -62587916 - MLT1L LTR MaLR -349 266 119 331 291 17 34 chr5 140497738 140497913 -62587619 - LTR33A LTR ERVL -2 521 350 4067 177 19 33 chr5 140498111 140499394 -62586138 - L1MB8 LINE L1 0 6178 4914 274 252 112 9 chr5 140501280 140501387 -62584145 - MIR SINE MIR -40 222 105 509 204 73 104 chr5 140501442 140501662 -62583870 - MLT1K LTR MaLR -10 578 366 857 78 0 0 chr5 140501850 140501965 -62583567 - L1PA11 LINE L1 -8 6166 6052 * 22611 45 2 0 chr5 140501963 140505556 -62579976 - L1PA5 LINE L1 -2 6152 2557 15753 70 4 1 chr5 140505557 140507707 -62577825 + L1PA5 LINE L1 412 2568 -3578 6878 121 15 14 chr5 140507702 140508566 -62576966 - L1PA11 LINE L1 -108 6066 5205 * 2544 101 27 3 chr5 140508566 140508932 -62576600 + THE1C LTR MaLR 1 375 0 6878 121 15 14 chr5 140508932 140510052 -62575480 - L1PA11 LINE L1 -969 5205 4085 2122 209 18 29 chr5 140510056 140510548 -62574984 - L1PA12 LINE L1 -7086 495 9 477 223 92 23 chr5 140510921 140510932 -62574600 - MER3 DNA MER1_type -23 139 130 216 86 0 0 chr5 140510932 140510967 -62574565 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 477 223 92 23 chr5 140510967 140511085 -62574447 - MER3 DNA MER1_type -32 130 1 386 262 56 71 chr5 140511134 140511543 -62573989 + L1MC5 LINE L1 7377 7779 -182 34 79 0 0 chr5 140511603 140511679 -62573853 + AT_rich Low_complexity Low_complexity 1 76 0 204 298 0 0 chr5 140512335 140512392 -62573140 - L2 LINE L2 -2668 646 590 858 262 118 68 chr5 140513683 140514156 -62571376 - L2 LINE L2 -5 3308 2812 541 279 41 20 chr5 140514215 140514566 -62570966 + LTR16A LTR ERVL 52 450 0 6359 260 99 19 chr5 140514567 140516568 -62568964 - L2 LINE L2 -518 2796 636 559 246 114 14 chr5 140516586 140516797 -62568735 + L2 LINE L2 1642 1873 -1441 26 30 0 0 chr5 140517078 140517111 -62568421 + AT_rich Low_complexity Low_complexity 1 33 0 456 269 19 111 chr5 140517649 140517865 -62567667 + MER91A DNA MER1_type 1 196 0 357 275 112 82 chr5 140517941 140518344 -62567188 + LTR67 LTR ERVL 123 537 -20 403 106 0 118 chr5 140519628 140519713 -62565819 + MADE1 DNA Mariner 6 80 0 310 179 0 0 chr5 140520124 140520180 -62565352 + LTR67 LTR ERVL 502 557 0 380 222 278 7 chr5 140520651 140520795 -62564737 + MER5A DNA MER1_type 4 186 -3 430 248 23 15 chr5 140520801 140520934 -62564598 - MER112 DNA MER1_type -109 151 18 625 249 75 12 chr5 140521555 140521728 -62563804 + MIR SINE MIR 13 196 -66 771 330 101 42 chr5 140521789 140522575 -62562957 + L3 LINE CR1 182 1013 -564 1552 243 69 28 chr5 140522575 140522840 -62562692 + L1ME2 LINE L1 2572 2825 -3321 3635 152 24 1 chr5 140522840 140523498 -62562034 + L1MA4A LINE L1 5628 6300 -3 1552 243 69 28 chr5 140523498 140523900 -62561632 + L1ME2 LINE L1 2825 3266 -2880 * 4344 216 68 32 chr5 140523878 140526296 -62559236 + L1ME2 LINE L1 3673 6333 -1 769 248 72 22 chr5 140529247 140529469 -62556063 + MIR SINE MIR 30 262 0 284 288 0 0 chr5 140529840 140529899 -62555633 - L2 LINE L2 0 3313 3255 255 306 0 99 chr5 140530088 140530209 -62555323 + MIR3 SINE MIR 85 193 -15 350 277 26 65 chr5 140530386 140530440 -62555092 - MER5A DNA MER1_type -6 183 128 447 152 0 0 chr5 140530440 140530519 -62555013 + MER116 DNA Mariner 1 79 -1 350 277 26 65 chr5 140530519 140530619 -62554913 - MER5A DNA MER1_type -61 128 35 218 354 15 0 chr5 140530689 140530754 -62554778 + L2 LINE L2 2690 2755 -559 * 333 318 209 0 chr5 140530750 140530879 -62554653 + MER5A DNA MER1_type 21 176 -13 310 213 228 29 chr5 140530767 140530903 -62554629 - MER5A DNA MER1_type -26 163 1 * 1993 141 0 0 chr5 140531560 140531878 -62553654 + AluSx SINE Alu 1 318 0 1038 267 74 47 chr5 140532194 140532707 -62552825 - Tigger8 DNA MER2_type -26 640 114 2107 140 0 0 chr5 140533993 140534307 -62551225 - AluSq SINE Alu 0 314 1 475 89 13 0 chr5 140534406 140534485 -62551047 + L1MA2 LINE L1 6225 6304 0 358 203 242 0 chr5 140535523 140535651 -62549881 - MER5A DNA MER1_type -5 184 26 189 147 0 0 chr5 140536764 140536798 -62548734 + (TTTTC)n Simple_repeat Simple_repeat 3 36 0 479 231 48 20 chr5 140537533 140537680 -62547852 + L1ME3A LINE L1 6020 6170 0 555 220 226 11 chr5 140538660 140538837 -62546695 + MIR SINE MIR 48 262 0 2415 167 0 31 chr5 140539155 140539609 -62545923 + L1MB5 LINE L1 5651 6090 -84 2284 108 3 0 chr5 140540100 140540395 -62545137 + AluSx SINE Alu 7 302 -10 386 265 51 8 chr5 140540592 140540709 -62544823 - L2 LINE L2 -2 3311 3190 716 282 45 23 chr5 140540790 140541010 -62544522 + MIR SINE MIR 22 246 -16 1903 166 0 3 chr5 140541520 140541833 -62543699 - AluSx SINE Alu 0 312 1 721 184 22 0 chr5 140541901 140542037 -62543495 + MLT1A2 LTR MaLR 236 374 0 283 374 50 14 chr5 140544189 140544328 -62541204 + MIR SINE MIR 20 163 -99 3247 29 5 0 chr5 140545527 140545956 -62539576 + L1PA4 LINE L1 5768 6198 0 4662 154 36 12 chr5 140546313 140546986 -62538546 - L1MB3 LINE L1 -8 6175 5462 1076 88 0 6 chr5 140546986 140547145 -62538387 + (TTTC)n Simple_repeat Simple_repeat 1 158 0 4662 154 36 12 chr5 140547145 140547538 -62537994 - L1MB3 LINE L1 -721 5462 5080 192 348 0 29 chr5 140551393 140551462 -62534070 - L2 LINE L2 -64 3208 3142 25 0 0 0 chr5 140552446 140552471 -62533061 + AT_rich Low_complexity Low_complexity 1 25 0 1819 173 7 0 chr5 140552549 140552850 -62532682 + AluJb SINE Alu 2 304 -8 374 313 107 0 chr5 140553935 140554085 -62531447 - L2 LINE L2 -217 3055 2890 2599 44 41 0 chr5 140554221 140554584 -62530948 - L1P LINE L1 -832 5314 4937 2857 73 0 8 chr5 140554584 140554966 -62530566 + L1PA6 LINE L1 5771 6150 -4 1329 161 4 0 chr5 140555136 140555366 -62530166 + MLT1A1 LTR MaLR 122 352 -13 390 74 0 0 chr5 140556078 140556132 -62529400 + (TCCC)n Simple_repeat Simple_repeat 1 54 0 2092 144 7 0 chr5 140556132 140556430 -62529102 - AluSx SINE Alu -12 300 1 235 288 55 0 chr5 140556535 140556608 -62528924 - L2 LINE L2 -38 3275 3199 348 187 40 65 chr5 140556987 140557094 -62528438 + MIR3 SINE MIR 69 173 -35 423 303 57 46 chr5 140558170 140558345 -62527187 + MIR3 SINE MIR 31 207 -1 318 153 0 0 chr5 140558459 140558518 -62527014 + (TG)n Simple_repeat Simple_repeat 1 59 0 21 0 0 0 chr5 140559131 140559152 -62526380 + AT_rich Low_complexity Low_complexity 1 21 0 736 222 43 19 chr5 140559773 140559980 -62525552 + L1MC4 LINE L1 7699 7910 -132 246 261 27 0 chr5 140559980 140560091 -62525441 + (TA)n Simple_repeat Simple_repeat 2 115 0 298 203 0 5 chr5 140560091 140560168 -62525364 + L1MD3 LINE L1 7703 7987 -8 2151 195 116 6 chr5 140560689 140561172 -62524360 - MLT1F LTR MaLR -2 540 5 303 250 26 0 chr5 140562884 140562960 -62522572 + L1MC4 LINE L1 6613 6690 -1352 1667 159 13 45 chr5 140562960 140563268 -62522264 - AluJo SINE Alu -14 298 1 2378 98 0 6 chr5 140564754 140565069 -62520463 - AluSq SINE Alu 0 313 1 198 143 0 0 chr5 140565401 140565436 -62520096 + (CA)n Simple_repeat Simple_repeat 2 36 0 502 254 7 22 chr5 140566003 140566141 -62519391 + MIR SINE MIR 127 262 0 219 311 16 0 chr5 140566957 140567018 -62518514 + L2 LINE L2 3239 3300 -13 238 317 133 31 chr5 140567024 140567317 -62518215 + L2 LINE L2 2306 2628 -686 22 35 0 0 chr5 140569822 140569851 -62515681 + AT_rich Low_complexity Low_complexity 1 29 0 1918 149 20 0 chr5 140570287 140570589 -62514943 + AluSx SINE Alu 1 308 -4 344 233 35 23 chr5 140570706 140570792 -62514740 + L2 LINE L2 3186 3272 0 537 233 247 0 chr5 140571358 140571504 -62514028 + MER5A DNA MER1_type 7 188 -1 304 274 110 12 chr5 140572607 140572771 -62512761 + L1ME4a LINE L1 5736 5915 -206 1464 62 0 5 chr5 140573080 140573273 -62512259 + L1MA1 LINE L1 5815 6006 -296 1006 152 24 0 chr5 140573456 140573621 -62511911 - L1MA1 LINE L1 0 6302 6134 2862 137 48 42 chr5 140573707 140573979 -62511553 + L1MA8 LINE L1 5709 5978 -313 2197 114 3 0 chr5 140573979 140574278 -62511254 + AluSg SINE Alu 1 300 -10 2862 137 48 42 chr5 140574278 140574583 -62510949 + L1MA8 LINE L1 5978 6290 -1 528 271 45 68 chr5 140575037 140575258 -62510274 - MIR SINE MIR -32 230 15 1105 167 48 24 chr5 140575877 140576087 -62509445 + AluJb SINE Alu 85 299 -13 2027 118 45 0 chr5 140576093 140576382 -62509150 + AluSx SINE Alu 3 304 -8 202 355 0 0 chr5 140576382 140576444 -62509088 - L2 LINE L2 -83 3189 3128 182 352 33 33 chr5 140576475 140576566 -62508966 - MIR SINE MIR -150 112 22 207 174 0 65 chr5 140577243 140577289 -62508243 + polypyrimidine Low_complexity Low_complexity 3 45 0 527 269 22 0 chr5 140577809 140577943 -62507589 + MIR SINE MIR 60 196 -66 201 360 8 56 chr5 140578462 140578587 -62506945 - L3 LINE CR1 -32 1545 1427 189 263 0 0 chr5 140578716 140578754 -62506778 + MIR SINE MIR 87 124 -84 207 389 0 23 chr5 140578953 140579084 -62506448 + L3 LINE CR1 1007 1134 -443 439 358 110 4 chr5 140579136 140579382 -62506150 + L3 LINE CR1 1264 1535 -42 994 258 18 4 chr5 140579443 140579672 -62505860 + MIR SINE MIR 29 260 -2 441 292 34 64 chr5 140579719 140579986 -62505546 - L2 LINE L2 -40 3273 3015 198 71 0 0 chr5 140581596 140581624 -62503908 + (TG)n Simple_repeat Simple_repeat 1 28 0 248 273 0 23 chr5 140581627 140581715 -62503817 + (TA)n Simple_repeat Simple_repeat 2 87 0 1144 96 0 0 chr5 140581715 140581872 -62503660 + Tigger5 DNA MER2_type 2072 2228 -95 1222 184 105 45 chr5 140581872 140582139 -62503393 + AluJo SINE Alu 6 288 -24 492 198 0 0 chr5 140582151 140582232 -62503300 + Tigger5 DNA MER2_type 2241 2321 -2 386 333 126 13 chr5 140582863 140583094 -62502438 + MIR SINE MIR 3 259 -3 495 113 0 0 chr5 140583320 140583400 -62502132 + (CA)n Simple_repeat Simple_repeat 2 81 0 213 284 0 11 chr5 140584997 140585085 -62500447 + (TTTAA)n Simple_repeat Simple_repeat 2 88 0 205 211 0 7 chr5 140585257 140585328 -62500204 + L2 LINE L2 3143 3264 -8 2964 133 33 0 chr5 140585907 140586359 -62499173 - LTR24 LTR ERV1 0 467 1 251 317 134 21 chr5 140586639 140586781 -62498751 - MIR3 SINE MIR -30 178 21 274 344 46 15 chr5 140588212 140588343 -62497189 - L2 LINE L2 0 3272 3138 21 0 0 0 chr5 140588569 140588590 -62496942 + AT_rich Low_complexity Low_complexity 1 21 0 857 248 22 106 chr5 140588709 140589031 -62496501 + L2 LINE L2 3019 3313 0 241 368 66 28 chr5 140590335 140590517 -62495015 + MIR3 SINE MIR 7 195 -13 472 284 159 16 chr5 140590645 140590965 -62494567 - L1ME4a LINE L1 -260 5861 5496 888 124 0 0 chr5 140592573 140592702 -62492830 + FLAM_C SINE Alu 1 129 -4 226 315 0 62 chr5 140593021 140593151 -62492381 - L2 LINE L2 0 3272 3151 376 254 177 0 chr5 140593197 140593327 -62492205 - MIR SINE MIR -13 249 97 345 300 30 0 chr5 140594198 140594298 -62491234 - MER5A DNA MER1_type -77 112 10 22 0 0 0 chr5 140594427 140594449 -62491083 + AT_rich Low_complexity Low_complexity 1 22 0 6142 92 0 10 chr5 140594604 140594963 -62490569 - L1PB1 LINE L1 0 6151 5790 195 42 0 0 chr5 140594963 140594987 -62490545 + (TATG)n Simple_repeat Simple_repeat 2 25 0 6142 92 0 10 chr5 140594987 140595665 -62489867 - L1PB1 LINE L1 -361 5790 5105 1977 147 46 3 chr5 140595701 140596047 -62489485 - MER46B DNA MER2_type 0 236 1 306 225 25 25 chr5 140596111 140596191 -62489341 + (TATG)n Simple_repeat Simple_repeat 4 83 0 383 260 92 58 chr5 140596670 140596866 -62488666 + MIR SINE MIR 15 222 -40 317 192 21 29 chr5 140597799 140597913 -62487619 + Alu SINE Alu 1 46 -255 1695 164 31 25 chr5 140598242 140598596 -62486936 - L1MB2 LINE L1 -2 6238 5883 182 244 26 17 chr5 140599344 140599459 -62486073 + CT-rich Low_complexity Low_complexity 4 119 0 23 54 0 0 chr5 140599664 140599701 -62485831 + AT_rich Low_complexity Low_complexity 1 37 0 1044 99 26 0 chr5 140599710 140599861 -62485671 - L1MA3 LINE L1 -8 6297 6143 1128 98 44 15 chr5 140599861 140600065 -62485467 + L1MA2 LINE L1 5958 6167 -137 22 70 0 0 chr5 140600326 140600369 -62485163 + AT_rich Low_complexity Low_complexity 1 43 0 189 233 0 67 chr5 140600669 140600729 -62484803 + L3b LINE CR1 1508 1563 -20 294 264 181 32 chr5 140600910 140601065 -62484467 - MLT1J LTR MaLR -333 178 1 522 269 74 61 chr5 140601074 140601285 -62484247 - L1MB2 LINE L1 -578 5665 5450 2159 108 10 20 chr5 140601285 140601591 -62483941 + AluSx SINE Alu 2 304 -8 522 269 74 61 chr5 140601591 140601625 -62483907 - L1MB2 LINE L1 -793 5450 5418 227 194 0 69 chr5 140603435 140603507 -62482025 + MER117 DNA MER1_type 82 148 -49 346 227 250 0 chr5 140605909 140606041 -62479491 - MER103 DNA DNA -1 165 1 26 0 0 0 chr5 140606167 140606193 -62479339 + AT_rich Low_complexity Low_complexity 1 26 0 693 174 0 36 chr5 140606603 140606779 -62478753 + AluJb SINE Alu 176 312 0 487 352 23 5 chr5 140606909 140607128 -62478404 + MER102a DNA MER1_type 108 330 0 1939 247 22 16 chr5 140608512 140609062 -62476470 - L1ME1 LINE L1 -5 6161 5609 274 293 20 0 chr5 140609116 140609215 -62476317 - L1ME1 LINE L1 -1546 4600 4500 403 183 0 0 chr5 140609223 140609305 -62476227 - L1ME1 LINE L1 -3461 2685 2604 * 6168 224 58 54 chr5 140609289 140611517 -62474015 - L1MB2 LINE L1 -1643 4572 2355 2347 49 21 3 chr5 140611517 140611805 -62473727 - AluY SINE Alu -18 293 1 6168 224 58 54 chr5 140611805 140612135 -62473397 - L1MB2 LINE L1 -3860 2355 2028 1174 167 38 11 chr5 140613250 140613514 -62472018 - L1MB8 LINE L1 -5 6173 5903 416 311 87 12 chr5 140614031 140614192 -62471340 + MIR3 SINE MIR 32 204 -4 23 0 0 0 chr5 140614362 140614385 -62471147 + AT_rich Low_complexity Low_complexity 1 23 0 567 0 0 0 chr5 140620333 140620396 -62465136 + (TG)n Simple_repeat Simple_repeat 2 64 0 2422 182 135 109 chr5 140621439 140622031 -62463501 - L1MC3 LINE L1 -1 7784 7209 248 258 0 54 chr5 140622031 140622124 -62463408 - MLT1F1 LTR MaLR -445 122 35 2422 182 135 109 chr5 140622124 140622301 -62463231 - L1MC3 LINE L1 -576 7209 7038 2186 113 3 3 chr5 140622301 140622601 -62462931 - AluSx SINE Alu -12 300 1 2422 182 135 109 chr5 140622601 140622804 -62462728 - L1MC3 LINE L1 -747 7038 6691 1768 219 45 109 chr5 140622807 140623593 -62461939 - LTR41 LTR ERVL -33 740 6 967 304 22 10 chr5 140623906 140624308 -62461224 - ERVL LTR ERVL -339 5425 5019 246 279 115 39 chr5 140624854 140624958 -62460574 + L2 LINE L2 3141 3252 -20 346 350 58 0 chr5 140625024 140625144 -62460388 - L2 LINE L2 -5 3267 3141 711 311 66 0 chr5 140625811 140626052 -62459480 - MIR SINE MIR 0 262 6 185 323 97 11 chr5 140626221 140626314 -62459218 + MIR3 SINE MIR 107 207 -1 302 275 60 34 chr5 140627330 140627479 -62458053 + MIR SINE MIR 110 262 0 1787 163 3 3 chr5 140627596 140627902 -62457630 - AluJo SINE Alu -6 306 1 857 291 74 67 chr5 140628217 140628745 -62456787 + L2 LINE L2 2469 2994 -319 2242 122 0 10 chr5 140628745 140629056 -62456476 - AluSx SINE Alu -4 308 1 857 291 74 67 chr5 140629056 140629379 -62456153 + L2 LINE L2 2994 3313 0 2358 100 0 3 chr5 140629659 140629970 -62455562 - AluSg SINE Alu 0 310 1 2297 115 0 3 chr5 140630811 140631124 -62454408 - AluSx SINE Alu 0 312 1 326 311 58 50 chr5 140631875 140632238 -62453294 + L1ME LINE L1 5263 5628 -538 676 188 0 0 chr5 140632494 140632611 -62452921 + FRAM SINE Alu 20 136 -40 189 0 0 0 chr5 140632611 140632632 -62452900 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1870 112 97 0 chr5 140634458 140634726 -62450806 - AluSx SINE Alu -18 294 1 1623 203 3 16 chr5 140634976 140635292 -62450240 + AluJo SINE Alu 1 312 0 392 270 91 87 chr5 140636745 140636997 -62448535 + MIR SINE MIR 2 254 -8 274 204 0 0 chr5 140637158 140637207 -62448325 - L2 LINE L2 -2 3270 3222 1906 164 0 0 chr5 140637317 140637603 -62447929 - AluJb SINE Alu -26 286 1 2438 74 0 0 chr5 140637658 140637999 -62447533 - AluY SINE Alu 0 311 1 204 318 82 12 chr5 140638264 140638349 -62447183 + MIR SINE MIR 40 130 -132 4378 114 10 1 chr5 140638394 140639067 -62446465 + L1PA13 LINE L1 5455 6133 -30 284 274 34 0 chr5 140639181 140639298 -62446234 - L1ME4a LINE L1 -16 6105 5985 1695 201 0 3 chr5 140639457 140639746 -62445786 - AluJb SINE Alu -24 288 1 452 257 55 15 chr5 140639747 140639949 -62445583 - L1ME4a LINE L1 -224 5897 5688 708 272 140 13 chr5 140639960 140640188 -62445344 + MIR SINE MIR 3 259 -3 516 133 0 0 chr5 140640227 140640310 -62445222 + (CA)n Simple_repeat Simple_repeat 2 84 0 228 315 140 0 chr5 140640310 140640453 -62445079 - L1ME4a LINE L1 -448 5673 5511 1769 163 30 10 chr5 140640453 140640748 -62444784 + AluJb SINE Alu 1 301 -11 180 0 0 0 chr5 140640811 140640831 -62444701 + (TTA)n Simple_repeat Simple_repeat 3 22 0 872 158 0 0 chr5 140641042 140641181 -62444351 + FLAM_C SINE Alu 2 140 -3 315 335 67 91 chr5 140641461 140641822 -62443710 + L2 LINE L2 2916 3267 -5 310 360 110 17 chr5 140643382 140643738 -62441794 + L3b LINE CR1 1102 1490 -93 2509 50 0 0 chr5 140644696 140644994 -62440538 - AluY SINE Alu -4 307 10 196 264 42 93 chr5 140645215 140645408 -62440124 + L2 LINE L2 2710 2892 -422 220 323 79 65 chr5 140646912 140647051 -62438481 + L3b LINE CR1 1106 1242 -341 2861 42 0 14 chr5 140647051 140647410 -62438122 + L1PA8 LINE L1 5819 6172 0 220 323 79 65 chr5 140647410 140647549 -62437983 + L3b LINE CR1 1242 1388 -195 391 356 46 16 chr5 140648043 140648237 -62437295 + L3b LINE CR1 1131 1330 -253 190 305 161 30 chr5 140648748 140649046 -62436486 + L2 LINE L2 1873 2209 -1105 281 406 31 6 chr5 140649529 140649689 -62435843 + L2 LINE L2 2334 2497 -817 200 348 127 17 chr5 140650402 140650520 -62435012 + L2 LINE L2 3134 3264 -8 22 0 0 0 chr5 140652440 140652462 -62433070 + AT_rich Low_complexity Low_complexity 1 22 0 7376 75 4 20 chr5 140652462 140653520 -62432012 - L1MA1 LINE L1 -6 6296 5257 613 76 0 0 chr5 140653520 140653599 -62431933 - MADE1 DNA Mariner 0 80 2 7376 75 4 20 chr5 140653599 140653708 -62431824 - L1MA1 LINE L1 -1045 5257 5148 1913 141 4 4 chr5 140653880 140654156 -62431376 - AluSx SINE Alu -18 294 19 344 260 60 0 chr5 140654165 140654265 -62431267 + MIR SINE MIR 127 232 -30 388 326 51 6 chr5 140654698 140655032 -62430500 - L1M4 LINE L1 -1923 4223 3875 1914 166 0 0 chr5 140657952 140658242 -62427290 + AluJo SINE Alu 1 290 -22 230 182 0 18 chr5 140659285 140659340 -62426192 + T-rich Low_complexity Low_complexity 3 56 0 201 147 0 0 chr5 140660708 140660742 -62424790 + (TG)n Simple_repeat Simple_repeat 1 34 0 605 263 141 40 chr5 140661811 140661839 -62423693 - MLT1H LTR MaLR 0 549 525 219 36 0 0 chr5 140661839 140661867 -62423665 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 605 263 141 40 chr5 140661867 140662289 -62423243 - MLT1H LTR MaLR -24 525 13 21 36 0 0 chr5 140662317 140662345 -62423187 + AT_rich Low_complexity Low_complexity 1 28 0 565 246 142 11 chr5 140663421 140663604 -62421928 + MIR SINE MIR 47 253 -9 580 334 97 62 chr5 140663872 140664365 -62421167 - L2 LINE L2 0 3272 2747 593 213 24 0 chr5 140664365 140664492 -62421040 - MER94 DNA DNA 0 134 5 580 334 97 62 chr5 140664492 140664725 -62420807 - L2 LINE L2 -525 2747 2524 520 208 40 0 chr5 140664939 140665064 -62420468 - MER94 DNA DNA 0 134 5 524 288 177 59 chr5 140665064 140665351 -62420181 - L2 LINE L2 -515 2799 2547 2295 104 23 0 chr5 140665351 140665650 -62419882 + AluSx SINE Alu 1 306 -6 524 288 177 59 chr5 140665650 140665747 -62419785 - L2 LINE L2 -767 2547 2463 2392 81 3 3 chr5 140665747 140666057 -62419475 - AluY SINE Alu -1 310 1 524 288 177 59 chr5 140666057 140666095 -62419437 - L2 LINE L2 -851 2463 2326 241 296 83 19 chr5 140666453 140666561 -62418971 - MIR SINE MIR -61 147 33 344 293 38 32 chr5 140669046 140669203 -62416329 + MIR3 SINE MIR 47 204 -4 64 35 0 0 chr5 140671538 140671623 -62413909 + AT_rich Low_complexity Low_complexity 1 85 0 897 76 0 0 chr5 140671623 140671741 -62413791 + AluY SINE Alu 184 301 -10 36 40 0 0 chr5 140671767 140671817 -62413715 + AT_rich Low_complexity Low_complexity 1 50 0 2151 113 23 0 chr5 140671971 140672271 -62413261 + AluSx SINE Alu 1 307 -5 3257 217 28 7 chr5 140673213 140674245 -62411287 - L1M4 LINE L1 -616 5558 4510 302 270 20 30 chr5 140676609 140676709 -62408823 + MER5A DNA MER1_type 21 119 -70 525 331 114 6 chr5 140676730 140676905 -62408627 - MER91A DNA MER1_type -2 194 1 207 0 0 0 chr5 140677874 140677897 -62407635 + (T)n Simple_repeat Simple_repeat 1 23 0 228 320 49 49 chr5 140678033 140678155 -62407377 - L2 LINE L2 -9 3263 3142 420 111 0 0 chr5 140678197 140678260 -62407272 + (CACTA)n Simple_repeat Simple_repeat 3 65 0 318 167 233 22 chr5 140679232 140679322 -62406210 - L2 LINE L2 -4 3309 3201 191 375 56 19 chr5 140679565 140679832 -62405700 + L2 LINE L2 2701 2977 -337 181 336 115 0 chr5 140680507 140680611 -62404921 + L3b LINE CR1 1227 1342 -241 21 0 0 0 chr5 140681688 140681709 -62403823 + AT_rich Low_complexity Low_complexity 1 21 0 263 305 31 55 chr5 140684094 140684222 -62401310 - L2 LINE L2 -1 3312 3188 203 303 56 34 chr5 140684952 140685041 -62400491 + L3 LINE CR1 1484 1574 -3 337 163 11 51 chr5 140686989 140687084 -62398448 + MIR3 SINE MIR 74 165 -43 760 288 93 14 chr5 140687628 140687906 -62397626 + L2 LINE L2 3014 3313 0 379 273 93 6 chr5 140688698 140688870 -62396662 - MER5A DNA MER1_type -2 187 1 481 257 144 40 chr5 140689407 140689629 -62395903 + MIR SINE MIR 6 250 -12 371 231 10 146 chr5 140692888 140693087 -62392445 - MIR SINE MIR -16 246 75 2198 211 44 16 chr5 140693172 140693736 -62391796 - L1ME1 LINE L1 -5 6161 5582 288 291 146 36 chr5 140694195 140694360 -62391172 - MIR3 SINE MIR 0 208 26 730 203 0 0 chr5 140694825 140694958 -62390574 - FLAM_A SINE Alu 0 133 1 2647 139 20 49 chr5 140696274 140696762 -62388770 - MER101 LTR ERV1 0 474 1 2223 105 0 10 chr5 140696898 140697204 -62388328 - AluSc SINE Alu -6 303 1 541 303 49 33 chr5 140697464 140697708 -62387824 - MIR SINE MIR -6 256 9 353 191 0 0 chr5 140697905 140697973 -62387559 - MER116 DNA Mariner 0 80 13 617 194 24 0 chr5 140697973 140698097 -62387435 - MIR SINE MIR -30 232 106 606 189 18 156 chr5 140699128 140699403 -62386129 - MIR SINE MIR -6 256 20 1768 169 30 58 chr5 140699494 140699960 -62385572 - Charlie1b DNA MER1_type 0 523 71 659 217 8 0 chr5 140699962 140700082 -62385450 + FLAM_A SINE Alu 1 121 -12 241 261 145 0 chr5 140700097 140700166 -62385366 - Charlie1b DNA MER1_type -444 79 1 468 214 35 7 chr5 140700310 140700455 -62385077 + MER53 DNA DNA 29 177 -12 2024 130 0 7 chr5 140700465 140700788 -62384744 - AluSx SINE Alu 0 321 1 262 322 2 22 chr5 140700836 140700945 -62384587 - MIR SINE MIR -63 145 38 280 286 77 0 chr5 140701696 140701787 -62383745 + MIR SINE MIR 92 189 -73 300 230 35 23 chr5 140702219 140702306 -62383226 - MER77 LTR ERV1 -9 596 509 * 741 234 52 60 chr5 140702301 140702553 -62382979 - MER77 LTR ERV1 -301 304 55 850 134 0 0 chr5 140702972 140703091 -62382441 - FLAM_C SINE Alu -24 119 1 417 281 7 41 chr5 140703224 140703370 -62382162 - MIR SINE MIR -50 212 72 210 279 54 72 chr5 140703946 140704057 -62381475 + MIR SINE MIR 20 128 -80 252 0 0 0 chr5 140705458 140705486 -62380046 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 1203 124 16 21 chr5 140705489 140705683 -62379849 - AluJb SINE Alu -24 288 96 180 135 0 0 chr5 140706158 140706195 -62379337 + (TC)n Simple_repeat Simple_repeat 2 38 0 23 33 0 0 chr5 140706295 140706325 -62379207 + AT_rich Low_complexity Low_complexity 1 30 0 312 309 63 40 chr5 140706429 140706604 -62378928 + MIR3 SINE MIR 30 208 0 213 39 0 0 chr5 140707020 140707046 -62378486 + (CAG)n Simple_repeat Simple_repeat 2 27 0 485 217 26 9 chr5 140708552 140708667 -62376865 + MER94 DNA DNA 1 117 -17 506 302 34 28 chr5 140711394 140711573 -62373959 + MIR SINE MIR 77 256 -6 2089 157 0 3 chr5 140712244 140712556 -62372976 + AluJo SINE Alu 1 311 -1 455 301 70 84 chr5 140712757 140712914 -62372618 + HAL1 LINE L1 986 1144 -1363 5991 93 16 8 chr5 140712914 140714762 -62370770 - L1PA13 LINE L1 -1 6162 4289 455 301 70 84 chr5 140714762 140715129 -62370403 + HAL1 LINE L1 1144 1503 -1004 587 270 166 19 chr5 140716906 140717165 -62368367 + L2 LINE L2 3017 3313 0 851 291 17 4 chr5 140717652 140717893 -62367639 + LTR16B LTR ERVL 91 334 -130 995 216 0 63 chr5 140718048 140718110 -62367422 + MER63B DNA MER1_type 1 65 -997 2058 105 0 0 chr5 140718110 140718420 -62367112 + AluSx SINE Alu 17 326 0 995 216 0 63 chr5 140718420 140718625 -62366907 + MER63B DNA MER1_type 65 252 -184 1911 152 50 0 chr5 140718637 140718934 -62366598 - AluJb SINE Alu 0 312 1 562 174 10 0 chr5 140718941 140719039 -62366493 + MER63B DNA MER1_type 336 434 -1 223 286 83 24 chr5 140719117 140719201 -62366331 - MIR3 SINE MIR -10 198 110 13823 135 50 12 chr5 140720399 140722703 -62362829 - Tigger1 DNA MER2_type 0 2418 26 253 322 21 28 chr5 140722779 140722922 -62362610 + MARNA DNA Mariner 432 573 -13 220 328 83 3 chr5 140723664 140723778 -62361754 + MIR3 SINE MIR 56 160 -48 22 35 0 0 chr5 140724250 140724279 -62361253 + AT_rich Low_complexity Low_complexity 1 29 0 4402 166 27 1 chr5 140724323 140725102 -62360430 - L1MC1 LINE L1 -6 6327 5529 5226 170 31 16 chr5 140725102 140726073 -62359459 - L1MCa LINE L1 -5423 1003 19 238 80 40 0 chr5 140726343 140726393 -62359139 + (TA)n Simple_repeat Simple_repeat 2 53 0 1472 0 0 0 chr5 140727097 140727257 -62358275 - L1PA2 LINE L1 -448 5707 5548 3674 23 0 0 chr5 140727257 140727687 -62357845 + L1PA2 LINE L1 5723 6154 -1 2354 132 0 11 chr5 140728851 140729221 -62356311 - MER47A DNA MER2_type 0 366 1 22 0 0 0 chr5 140729364 140729386 -62356146 + AT_rich Low_complexity Low_complexity 1 22 0 463 289 115 18 chr5 140729499 140729838 -62355694 - L1ME4a LINE L1 -204 5917 5546 2089 131 0 10 chr5 140729881 140730187 -62355345 + AluSq SINE Alu 11 313 0 279 79 0 0 chr5 140730875 140730913 -62354619 + (TG)n Simple_repeat Simple_repeat 1 38 0 962 170 36 21 chr5 140731021 140731215 -62354317 - MSTD LTR MaLR 0 396 200 2243 122 169 47 chr5 140731260 140731803 -62353729 - MER4B LTR ERV1 0 779 10 24 32 0 0 chr5 140731803 140731834 -62353698 + AT_rich Low_complexity Low_complexity 1 31 0 213 154 0 0 chr5 140731918 140731957 -62353575 + (TA)n Simple_repeat Simple_repeat 2 40 0 203 250 97 28 chr5 140732468 140732540 -62352992 - MER5A DNA MER1_type -63 126 50 1522 153 40 13 chr5 140732575 140732876 -62352656 - L1MA5A LINE L1 -7 6290 5982 781 89 138 8 chr5 140732878 140733001 -62352531 - MSTD LTR MaLR -257 139 1 2480 59 7 7 chr5 140733129 140733436 -62352096 - AluY SINE Alu -4 307 1 200 257 29 114 chr5 140733866 140734006 -62351526 + L3 LINE CR1 1300 1427 -150 628 305 99 19 chr5 140735070 140735444 -62350088 + L1MC/D LINE L1 5386 5789 -2019 180 416 20 0 chr5 140735730 140735831 -62349701 - L2 LINE L2 -77 3195 3093 769 214 71 58 chr5 140738194 140738418 -62347114 - MIR SINE MIR -30 232 6 2085 162 9 0 chr5 140738546 140738880 -62346652 - MER1B DNA MER1_type 0 337 1 328 120 13 0 chr5 140738933 140738993 -62346539 - MSTB1 LTR MaLR 0 426 361 1460 291 77 15 chr5 140738994 140739579 -62345953 + HAL1 LINE L1 1243 1863 -644 534 255 38 16 chr5 140739549 140739733 -62345799 + HAL1 LINE L1 2263 2450 -57 * 240 188 15 98 chr5 140739875 140740008 -62345524 + A-rich Low_complexity Low_complexity 2 123 0 398 274 89 59 chr5 140740010 140740106 -62345426 + L1MB8 LINE L1 2154 2246 -3900 1102 194 25 76 chr5 140740106 140740421 -62345111 + AluSx SINE Alu 1 299 -3 398 274 89 59 chr5 140740421 140740682 -62344850 + L1MB8 LINE L1 2246 2522 -3624 315 0 0 0 chr5 140740741 140740776 -62344756 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 100 0 0 chr5 140741927 140741957 -62343575 + (CA)n Simple_repeat Simple_repeat 2 31 0 239 208 108 15 chr5 140742023 140742153 -62343379 + L1MB8 LINE L1 2799 2940 -3206 23 33 0 0 chr5 140742189 140742219 -62343313 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 140742347 140742368 -62343164 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 140742628 140742660 -62342872 + AT_rich Low_complexity Low_complexity 1 32 0 1165 219 57 3 chr5 140743062 140743359 -62342173 + L1MC2 LINE L1 586 898 -5147 5730 179 88 52 chr5 140743440 140743837 -62341695 + L1MC2 LINE L1 894 1275 -5289 371 47 0 62 chr5 140743837 140743901 -62341631 + L1PA2 LINE L1 6096 6155 0 5730 179 88 52 chr5 140743901 140744326 -62341206 + L1MC2 LINE L1 1275 1683 -4881 1834 162 0 7 chr5 140744326 140744772 -62340760 + AluSx SINE Alu 1 444 0 5730 179 88 52 chr5 140744772 140745592 -62339940 + L1MC2 LINE L1 1683 2597 -3967 1144 167 26 34 chr5 140745589 140745822 -62339710 + L1MA9 LINE L1 5878 6108 -204 * 2744 219 25 4 chr5 140745902 140746950 -62338582 + L1MC2 LINE L1 2580 3843 -2721 6199 156 13 1 chr5 140746962 140748009 -62337523 + L1MC2 LINE L1 5694 6753 -9 513 302 80 28 chr5 140748020 140748232 -62337300 + MIR SINE MIR 21 243 -19 889 202 35 5 chr5 140748580 140748778 -62336754 + MER3 DNA MER1_type 1 204 -5 1308 235 58 4 chr5 140748813 140749264 -62336268 + L1MB8 LINE L1 2909 3383 -2763 * 3131 181 33 41 chr5 140749240 140749943 -62335589 + L1MB8 LINE L1 5482 6178 0 2344 97 0 0 chr5 140750842 140751142 -62334390 - AluSq SINE Alu -13 300 1 1755 161 0 17 chr5 140751620 140751918 -62333614 + AluJb SINE Alu 3 295 -17 427 340 50 39 chr5 140752412 140752771 -62332761 + L1MC/D LINE L1 2821 3183 -3381 237 305 73 0 chr5 140752845 140752996 -62332536 + L1MC/D LINE L1 4676 4837 -1727 614 239 8 0 chr5 140753028 140753145 -62332387 + FLAM_A SINE Alu 1 118 -24 24 67 0 0 chr5 140753148 140753193 -62332339 + AT_rich Low_complexity Low_complexity 1 45 0 892 296 24 14 chr5 140753513 140753810 -62331722 + L1MC/D LINE L1 5868 6167 -2059 2177 143 27 30 chr5 140754469 140754834 -62330698 + THE1B LTR MaLR 1 364 0 2233 96 7 3 chr5 140755260 140755552 -62329980 + AluSx SINE Alu 1 293 -19 512 263 325 23 chr5 140756194 140756836 -62328696 - L2 LINE L2 0 3313 2451 270 0 0 0 chr5 140756836 140756866 -62328666 + (TG)n Simple_repeat Simple_repeat 2 31 0 1156 116 124 4 chr5 140756866 140757091 -62328441 - L1MC3 LINE L1 -4 7781 7530 1499 163 58 92 chr5 140757092 140757568 -62327964 + MER89 LTR ERV1 2 559 0 1403 162 79 4 chr5 140757569 140757822 -62327710 - L1MC3 LINE L1 -253 7532 7261 636 262 184 20 chr5 140757827 140758121 -62327411 - L2 LINE L2 -855 2459 2118 448 248 118 21 chr5 140758199 140758437 -62327095 - L1M4 LINE L1 -2077 4069 3809 330 67 0 0 chr5 140758525 140758570 -62326962 + (T)n Simple_repeat Simple_repeat 1 45 0 269 303 67 34 chr5 140758688 140758807 -62326725 - MIR3 SINE MIR -41 167 45 453 287 0 15 chr5 140762781 140762917 -62322615 + MER94 DNA DNA 1 134 0 626 241 44 75 chr5 140763071 140763299 -62322233 - MIR SINE MIR -19 243 23 298 197 0 14 chr5 140763340 140763411 -62322121 - MER53 DNA DNA -31 158 89 2178 72 11 0 chr5 140763771 140764083 -62321449 + AluSc SINE Alu 1 315 0 258 264 42 0 chr5 140764478 140764550 -62320982 + MIR SINE MIR 117 191 -71 999 193 50 119 chr5 140764627 140765129 -62320403 + MLT1C LTR MaLR 1 467 0 868 259 187 21 chr5 140765130 140765835 -62319697 + L2 LINE L2 2488 3312 -1 2193 78 25 0 chr5 140766203 140766486 -62319046 + AluSg SINE Alu 4 293 -17 204 379 8 68 chr5 140766563 140766695 -62318837 - MIR SINE MIR -63 145 22 234 254 51 0 chr5 140766709 140766768 -62318764 - L2 LINE L2 0 3272 3211 314 127 0 16 chr5 140767267 140767330 -62318202 + (CGGGG)n Simple_repeat Simple_repeat 3 64 0 308 231 129 106 chr5 140767532 140767796 -62317736 - L1M2 LINE L1 -5826 1023 754 21 0 0 0 chr5 140768315 140768336 -62317196 + AT_rich Low_complexity Low_complexity 1 21 0 524 313 197 46 chr5 140769060 140769823 -62315709 + L2 LINE L2 1712 2589 -725 866 196 79 5 chr5 140769824 140770013 -62315519 - MER20 DNA MER1_type 0 219 17 2018 218 114 36 chr5 140770163 140770740 -62314792 + L1MD2 LINE L1 5718 6339 -20 3257 115 24 24 chr5 140770834 140771395 -62314137 + LTR10A LTR ERV1 1 609 0 298 330 143 45 chr5 140771537 140771894 -62313638 + L2 LINE L2 2921 3312 -1 1592 187 7 7 chr5 140772148 140772447 -62313085 - AluJb SINE Alu -13 299 1 1204 175 21 133 chr5 140772531 140772868 -62312664 - AluJo SINE Alu -3 299 1 2210 108 7 0 chr5 140773633 140773930 -62311602 - AluSx SINE Alu -13 299 1 2918 158 56 54 chr5 140774738 140775403 -62310129 - L1MB8 LINE L1 -5 6173 5508 490 270 110 63 chr5 140776561 140776950 -62308582 - L1ME4a LINE L1 -4 6117 5748 1109 123 30 47 chr5 140776950 140777185 -62308347 - L1MA8 LINE L1 -2 6289 6059 490 270 110 63 chr5 140777185 140777224 -62308308 - L1ME4a LINE L1 -373 5748 5712 1709 177 6 22 chr5 140777224 140777540 -62307992 + AluJo SINE Alu 1 311 -1 490 270 110 63 chr5 140777540 140778057 -62307475 - L1ME4a LINE L1 -409 5712 5092 2269 95 3 7 chr5 140778057 140778361 -62307171 - AluSq SINE Alu -2 311 9 490 270 110 63 chr5 140778361 140778726 -62306806 - L1ME4a LINE L1 -1029 5092 4745 43 20 0 0 chr5 140778958 140779008 -62306524 + AT_rich Low_complexity Low_complexity 1 50 0 234 150 0 0 chr5 140779742 140779782 -62305750 + (TA)n Simple_repeat Simple_repeat 1 40 0 375 186 186 0 chr5 140779805 140779907 -62305625 + MER5C DNA MER1_type 4 124 -200 196 180 0 60 chr5 140779921 140779971 -62305561 + MER5C DNA MER1_type 234 280 -44 299 316 164 7 chr5 140780949 140781101 -62304431 - MIR SINE MIR -79 183 8 309 220 98 91 chr5 140781306 140781364 -62304168 - MIR SINE MIR -65 197 141 1534 119 36 0 chr5 140781364 140781583 -62303949 - AluSg/x SINE Alu -1 311 85 309 220 98 91 chr5 140781583 140781656 -62303876 - MIR SINE MIR -121 141 65 2371 95 0 0 chr5 140781855 140782159 -62303373 - AluSc SINE Alu -5 304 1 664 227 121 41 chr5 140782565 140782953 -62302579 + Charlie7 DNA MER1_type 2190 2608 -4 252 295 139 30 chr5 140783153 140783319 -62302213 + MIR SINE MIR 53 236 -26 1708 236 167 67 chr5 140783889 140784740 -62300792 + L2 LINE L2 1582 2517 -797 2348 211 23 25 chr5 140784764 140785295 -62300237 + MER82 DNA MER2_type 17 546 -107 192 254 113 0 chr5 140785430 140785501 -62300031 - MIR SINE MIR -1 261 183 291 337 31 0 chr5 140787763 140787861 -62297671 - L2 LINE L2 -21 3292 3192 403 268 83 43 chr5 140788329 140788583 -62296949 + L1M4 LINE L1 4163 4426 -1720 214 292 62 62 chr5 140789009 140789139 -62296393 + MIR SINE MIR 58 187 -75 808 240 52 34 chr5 140790211 140790478 -62295054 - L1MDb LINE L1 -4613 1974 1703 1429 48 5 0 chr5 140790478 140790667 -62294865 - L1P LINE L1 -775 5371 5182 * 33845 37 1 4 chr5 140790652 140794783 -62290749 - L1P LINE L1 -2024 4122 3 6325 28 13 0 chr5 140794789 140795542 -62289990 + L1PA3 LINE L1 5393 6155 0 692 259 68 43 chr5 140795565 140795994 -62289538 - L1MDb LINE L1 -4896 1691 1214 309 263 0 0 chr5 140798790 140798870 -62286662 - MER116 DNA Mariner 0 80 1 240 319 41 30 chr5 140799066 140799235 -62286297 + L1M4 LINE L1 3717 3887 -2259 1219 189 23 0 chr5 140799417 140799634 -62285898 + MER58A DNA MER1_type 3 224 0 355 194 41 31 chr5 140799858 140799956 -62285576 + L1ME4a LINE L1 5965 6063 -58 594 230 149 6 chr5 140800295 140800456 -62285076 + MER5A DNA MER1_type 4 187 -2 24 32 0 0 chr5 140802764 140802795 -62282737 + AT_rich Low_complexity Low_complexity 1 31 0 3667 134 49 65 chr5 140805110 140805906 -62279626 - L1MC1 LINE L1 0 6333 5551 28 0 0 0 chr5 140806329 140806357 -62279175 + AT_rich Low_complexity Low_complexity 1 28 0 279 313 97 15 chr5 140806458 140806592 -62278940 - MIR SINE MIR -110 152 8 21 0 0 0 chr5 140806958 140806979 -62278553 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 140807093 140807114 -62278418 + AT_rich Low_complexity Low_complexity 1 21 0 1456 253 122 43 chr5 140807148 140808177 -62277355 - L1ME3 LINE L1 -165 5931 4825 437 309 58 29 chr5 140808310 140808561 -62276971 - L1ME3 LINE L1 -4579 1682 1415 2219 102 0 3 chr5 140808561 140808856 -62276676 - AluSq SINE Alu -19 294 1 437 309 58 29 chr5 140808856 140808983 -62276549 - L1ME3 LINE L1 -4846 1415 1293 347 318 109 5 chr5 140809017 140809218 -62276314 - L1ME3 LINE L1 -5113 1148 927 240 247 118 48 chr5 140809222 140809408 -62276124 - L1ME3 LINE L1 -5194 876 678 1303 139 5 29 chr5 140809473 140809682 -62275850 - AluJo SINE Alu -24 288 85 222 372 33 0 chr5 140810757 140810878 -62274654 + L2 LINE L2 3188 3312 -1 24 32 0 0 chr5 140810934 140810965 -62274567 + AT_rich Low_complexity Low_complexity 1 31 0 306 358 67 7 chr5 140811105 140811282 -62274250 + MIR SINE MIR 30 214 -48 725 273 44 13 chr5 140812140 140812367 -62273165 - MER102a DNA MER1_type -5 325 92 397 177 16 0 chr5 140813682 140813744 -62271788 + MER2 DNA MER2_type 1 63 -282 205 337 51 10 chr5 140815341 140815439 -62270093 - MIR SINE MIR -82 180 79 287 277 146 0 chr5 140815477 140815607 -62269925 - MIR SINE MIR -24 238 90 2225 188 142 45 chr5 140815943 140816660 -62268872 + LTR48 LTR ERV1 1 787 0 201 182 0 23 chr5 140816714 140816758 -62268774 + MIR SINE MIR 186 228 -34 1169 148 30 9 chr5 140816998 140817222 -62268310 + MER83B LTR ERV1 138 330 -48 453 300 94 6 chr5 140817486 140817656 -62267876 + MIR SINE MIR 3 187 -75 231 188 0 0 chr5 140818099 140818147 -62267385 + GA-rich Low_complexity Low_complexity 2 49 0 186 274 178 0 chr5 140818447 140818520 -62267012 + MIR SINE MIR 171 256 -6 334 290 0 19 chr5 140818544 140818651 -62266881 + GA-rich Low_complexity Low_complexity 4 108 0 5166 129 173 33 chr5 140819014 140820118 -62265414 + pTR5 LTR ERV1 741 1999 -439 287 260 41 16 chr5 140820118 140820241 -62265291 + LTR30 LTR ERV1 517 642 -80 1075 139 123 0 chr5 140820242 140820429 -62265103 + LTR12 LTR ERV1 377 586 -128 537 267 51 6 chr5 140822205 140822381 -62263151 - MLT1J2 LTR MaLR -231 219 36 273 324 167 0 chr5 140822451 140822553 -62262979 - MIR SINE MIR -127 135 17 229 253 40 13 chr5 140822697 140822772 -62262760 + L2 LINE L2 3196 3272 0 188 275 14 29 chr5 140822890 140822959 -62262573 + L2 LINE L2 2657 2724 -590 * 1992 259 9 7 chr5 140822949 140823501 -62262031 + L1M3c LINE L1 2 593 -5548 501 120 98 0 chr5 140823571 140823663 -62261869 + L1M3c LINE L1 1157 1257 -4884 317 197 0 56 chr5 140823663 140823734 -62261798 + AluSp SINE Alu 120 186 -117 11369 199 47 62 chr5 140823738 140824189 -62261343 + L1MA9 LINE L1 661 1117 -5259 1447 248 7 0 chr5 140824189 140824488 -62261044 - AluJo SINE Alu -11 301 1 11369 199 47 62 chr5 140824488 140824602 -62260930 + L1MA9 LINE L1 1117 1231 -5145 640 228 0 8 chr5 140824602 140824725 -62260807 + FLAM_A SINE Alu 1 122 -11 11369 199 47 62 chr5 140824725 140825633 -62259899 + L1MA9 LINE L1 1231 2152 -4224 2264 68 0 4 chr5 140825633 140825942 -62259590 + AluY SINE Alu 1 308 0 11369 199 47 62 chr5 140825942 140828394 -62257138 + L1MA9 LINE L1 2152 4641 -1735 1508 157 105 21 chr5 140828394 140828680 -62256852 + AluSg SINE Alu 1 310 0 11369 199 47 62 chr5 140828680 140829173 -62256359 + L1MA9 LINE L1 4641 5140 -1236 974 150 28 142 chr5 140829173 140829427 -62256105 + AluJo SINE Alu 63 287 -25 11369 199 47 62 chr5 140829427 140830935 -62254597 + L1MA9 LINE L1 5140 6371 -5 800 236 76 17 chr5 140830938 140831175 -62254357 + L1MB7 LINE L1 5814 6064 -120 276 234 43 11 chr5 140831148 140831242 -62254290 + L1MB8 LINE L1 6066 6162 -16 * 268 79 0 0 chr5 140831278 140831316 -62254216 + L1MB8 LINE L1 5728 5765 -413 768 119 24 0 chr5 140831333 140831459 -62254073 + L1MB8 LINE L1 6041 6169 -9 185 246 0 72 chr5 140831481 140831550 -62253982 + L2 LINE L2 2702 2765 -549 1796 151 9 69 chr5 140831552 140831964 -62253568 - AluJo SINE Alu 0 392 1 2799 170 199 121 chr5 140831964 140832467 -62253065 + L1MD3 LINE L1 6737 7199 -796 493 229 8 53 chr5 140832467 140832598 -62252934 + MLT1F1 LTR MaLR 1 125 -442 2799 170 199 121 chr5 140832598 140833132 -62252400 + L1MD3 LINE L1 7199 7995 0 751 305 67 19 chr5 140833154 140833569 -62251963 + L2 LINE L2 2757 3186 -127 1561 185 75 81 chr5 140833571 140834079 -62251453 + MLT1D LTR MaLR 1 505 0 996 179 0 6 chr5 140834370 140834538 -62250994 - FRAM SINE Alu -10 166 1 318 277 27 34 chr5 140835138 140835291 -62250241 - MLT1K LTR MaLR 0 615 435 1160 220 5 0 chr5 140835511 140835734 -62249798 + MER58A DNA MER1_type 1 224 0 466 297 118 33 chr5 140836005 140836217 -62249315 - MIR SINE MIR -21 241 12 732 187 90 12 chr5 140836391 140836557 -62248975 + L1PB4 LINE L1 5970 6148 -8 239 300 100 0 chr5 140836752 140836882 -62248650 - MER103 DNA DNA -22 144 2 330 187 40 27 chr5 140837845 140837920 -62247612 + MER21B LTR ERV1 158 233 -630 1733 219 160 64 chr5 140838176 140838896 -62246636 - MER21B LTR ERV1 -52 811 23 69 78 0 0 chr5 140840889 140841042 -62244490 + AT_rich Low_complexity Low_complexity 1 153 0 208 369 90 9 chr5 140841123 140841234 -62244298 - MIR3 SINE MIR -25 183 64 449 252 37 37 chr5 140841236 140841371 -62244161 - L2 LINE L2 -19 3294 3160 28 38 0 19 chr5 140842188 140842216 -62243316 + AT_rich Low_complexity Low_complexity 1 29 -23 2278 108 3 0 chr5 140842216 140842522 -62243010 + AluSp SINE Alu 1 307 -6 28 38 0 19 chr5 140842522 140842546 -62242986 + AT_rich Low_complexity Low_complexity 29 52 0 2219 138 0 0 chr5 140842750 140843062 -62242470 - AluSx SINE Alu 0 312 1 2340 93 3 3 chr5 140844085 140844397 -62241135 + AluSp SINE Alu 1 312 -1 21 0 0 0 chr5 140844442 140844463 -62241069 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 0 27 chr5 140844593 140844668 -62240864 + MIR SINE MIR 189 261 -1 828 281 45 16 chr5 140849089 140849458 -62236074 - LTR16A LTR ERVL 0 457 73 721 262 202 17 chr5 140849596 140850066 -62235466 - MLT1G LTR MaLR 0 590 34 321 140 0 0 chr5 140850277 140850334 -62235198 + (CA)n Simple_repeat Simple_repeat 1 57 0 565 301 103 55 chr5 140851980 140852485 -62233047 + L2 LINE L2 2241 2769 -545 474 194 72 19 chr5 140852485 140852724 -62232808 + MER33 DNA MER1_type 1 304 -20 402 57 0 0 chr5 140852884 140852937 -62232595 + (TG)n Simple_repeat Simple_repeat 2 54 0 1903 216 25 41 chr5 140854658 140855171 -62230361 - MLT1D LTR MaLR 0 505 1 2903 6 0 0 chr5 140856389 140856704 -62228828 - AluYb8 SINE Alu -3 315 1 586 173 73 86 chr5 140857010 140857230 -62228302 + MER112 DNA MER1_type 1 217 -43 268 263 202 66 chr5 140858851 140859049 -62226483 - L2 LINE L2 -254 3059 2835 288 214 12 0 chr5 140859062 140859146 -62226386 + MER53 DNA DNA 97 181 -8 1942 272 82 33 chr5 140859188 140859590 -62225942 - L1MC4a LINE L1 -750 5396 5015 1553 164 50 34 chr5 140859590 140859888 -62225644 - AluJb SINE Alu -9 303 1 1942 272 82 33 chr5 140859888 140860582 -62224950 - L1MC4a LINE L1 -1131 5015 5102 3417 72 0 4 chr5 140860582 140861039 -62224493 - L1PA13 LINE L1 -3 6160 5706 1942 272 82 33 chr5 140861039 140861375 -62224157 - L1MC4a LINE L1 -1043 5103 4785 999 252 90 3 chr5 140861381 140861702 -62223830 - L2 LINE L2 -772 2542 2194 212 333 144 0 chr5 140861724 140861814 -62223718 - MIR SINE MIR -112 150 48 1691 193 32 11 chr5 140861825 140862199 -62223333 - MLT1B LTR MaLR 0 390 9 1845 217 99 44 chr5 140862246 140862771 -62222761 - MLT2B3 LTR ERVL 0 554 1 2121 137 0 7 chr5 140862842 140863148 -62222384 + AluSx SINE Alu 1 304 -8 1955 35 0 0 chr5 140864210 140864440 -62221092 + L1PA5 LINE L1 5912 6141 -13 1209 98 0 0 chr5 140864440 140864614 -62220918 + (TA)n Simple_repeat Simple_repeat 1 174 0 1325 222 52 0 chr5 140864767 140864883 -62220649 + AluJo SINE Alu 1 110 -202 276 53 0 0 chr5 140864883 140864921 -62220611 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 1325 222 52 0 chr5 140864921 140865092 -62220440 + AluJo SINE Alu 110 303 -9 1780 129 58 41 chr5 140865202 140865566 -62219966 + THE1C LTR MaLR 1 370 -5 472 141 22 4 chr5 140866719 140866850 -62218682 + MER53 DNA DNA 1 186 -3 36 0 0 0 chr5 140867276 140867312 -62218220 + AT_rich Low_complexity Low_complexity 1 36 0 1479 161 79 4 chr5 140867312 140867566 -62217966 - AluJb SINE Alu -39 273 1 2075 119 35 54 chr5 140868647 140869018 -62216514 - THE1B LTR MaLR 0 364 1 342 0 0 0 chr5 140869023 140869061 -62216471 + (CA)n Simple_repeat Simple_repeat 1 38 0 2124 128 127 81 chr5 140869160 140869729 -62215803 - LTR49 LTR ERV1 0 595 1 2136 214 40 27 chr5 140869948 140870475 -62215057 + MLT1F LTR MaLR 5 538 -4 2066 240 52 50 chr5 140870653 140871371 -62214161 - MER72 LTR ERV1 0 722 4 693 291 97 0 chr5 140871398 140871635 -62213897 + MIR SINE MIR 1 260 -2 331 256 0 0 chr5 140872971 140873049 -62212483 + HAL1 LINE L1 623 700 -1807 1605 241 94 21 chr5 140873171 140873946 -62211586 + HAL1 LINE L1 948 1859 -648 21 0 0 0 chr5 140874657 140874678 -62210854 + AT_rich Low_complexity Low_complexity 1 21 0 378 148 8 16 chr5 140875979 140876101 -62209431 + (TG)n Simple_repeat Simple_repeat 1 121 0 189 158 79 0 chr5 140876982 140877020 -62208512 - L3 LINE CR1 -776 801 761 2258 114 0 0 chr5 140877727 140878035 -62207497 + AluY SINE Alu 1 308 -3 26 30 0 0 chr5 140878060 140878093 -62207439 + AT_rich Low_complexity Low_complexity 1 33 0 1963 271 83 34 chr5 140878652 140879054 -62206478 - L1MC4a LINE L1 -750 5396 5015 1562 164 50 33 chr5 140879054 140879353 -62206179 - AluJb SINE Alu -8 304 1 1963 271 83 34 chr5 140879353 140880047 -62205485 - L1MC4a LINE L1 -1131 5015 5102 3400 74 0 4 chr5 140880047 140880504 -62205028 - L1PA13 LINE L1 -3 6160 5706 1963 271 83 34 chr5 140880504 140880840 -62204692 - L1MC4a LINE L1 -1043 5103 4785 988 256 90 3 chr5 140880846 140881167 -62204365 - L2 LINE L2 -772 2542 2194 212 333 144 0 chr5 140881189 140881279 -62204253 - MIR SINE MIR -112 150 48 1691 193 32 11 chr5 140881290 140881664 -62203868 - MLT1B LTR MaLR 0 390 9 1845 217 99 44 chr5 140881711 140882236 -62203296 - MLT2B3 LTR ERVL 0 554 1 1315 151 22 119 chr5 140882307 140882625 -62202907 + AluJo SINE Alu 1 287 -25 5558 162 32 4 chr5 140882637 140884133 -62201399 + L1MA9 LINE L1 4763 6307 -5 800 236 76 17 chr5 140884136 140884373 -62201159 + L1MB7 LINE L1 5814 6064 -120 276 234 43 11 chr5 140884346 140884440 -62201092 + L1MB8 LINE L1 6066 6162 -16 * 268 79 0 0 chr5 140884476 140884514 -62201018 + L1MB8 LINE L1 5728 5765 -413 768 119 24 0 chr5 140884531 140884657 -62200875 + L1MB8 LINE L1 6041 6169 -9 185 246 0 72 chr5 140884679 140884748 -62200784 + L2 LINE L2 2702 2765 -549 1796 151 9 69 chr5 140884750 140885162 -62200370 - AluJo SINE Alu 0 392 1 2799 170 199 121 chr5 140885162 140885665 -62199867 + L1MD3 LINE L1 6737 7199 -796 495 229 8 53 chr5 140885665 140885796 -62199736 + MLT1F1 LTR MaLR 1 125 -442 2799 170 199 121 chr5 140885796 140886330 -62199202 + L1MD3 LINE L1 7199 7995 0 751 305 67 19 chr5 140886352 140886767 -62198765 + L2 LINE L2 2757 3186 -127 1561 185 75 81 chr5 140886769 140887277 -62198255 + MLT1D LTR MaLR 1 505 0 996 179 0 6 chr5 140887568 140887736 -62197796 - FRAM SINE Alu -10 166 1 318 277 27 34 chr5 140888336 140888489 -62197043 - MLT1K LTR MaLR 0 615 435 1160 220 5 0 chr5 140888709 140888932 -62196600 + MER58A DNA MER1_type 1 224 0 466 297 118 33 chr5 140889203 140889415 -62196117 - MIR SINE MIR -21 241 12 732 187 90 12 chr5 140889589 140889755 -62195777 + L1PB4 LINE L1 5970 6148 -8 239 300 100 0 chr5 140889950 140890080 -62195452 - MER103 DNA DNA -22 144 2 330 187 40 27 chr5 140891043 140891118 -62194414 + MER21B LTR ERV1 158 233 -630 1733 219 160 64 chr5 140891374 140892094 -62193438 - MER21B LTR ERV1 -52 811 23 69 78 0 0 chr5 140894087 140894240 -62191292 + AT_rich Low_complexity Low_complexity 1 153 0 208 369 90 9 chr5 140894321 140894432 -62191100 - MIR3 SINE MIR -25 183 64 449 252 37 37 chr5 140894434 140894569 -62190963 - L2 LINE L2 -19 3294 3160 28 38 0 19 chr5 140895386 140895414 -62190118 + AT_rich Low_complexity Low_complexity 1 29 -23 2278 108 3 0 chr5 140895414 140895720 -62189812 + AluSp SINE Alu 1 307 -6 28 38 0 19 chr5 140895720 140895744 -62189788 + AT_rich Low_complexity Low_complexity 29 52 0 2219 138 0 0 chr5 140895948 140896260 -62189272 - AluSx SINE Alu 0 312 1 2340 93 3 3 chr5 140897283 140897595 -62187937 + AluSp SINE Alu 1 312 -1 21 0 0 0 chr5 140897640 140897661 -62187871 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 0 27 chr5 140897791 140897866 -62187666 + MIR SINE MIR 189 261 -1 828 281 45 16 chr5 140902287 140902656 -62182876 - LTR16A LTR ERVL 0 457 73 721 262 202 17 chr5 140902794 140903264 -62182268 - MLT1G LTR MaLR 0 590 34 321 140 0 0 chr5 140903475 140903532 -62182000 + (CA)n Simple_repeat Simple_repeat 1 57 0 511 302 103 57 chr5 140905178 140905684 -62179848 + L2 LINE L2 2241 2769 -545 474 194 72 21 chr5 140905684 140905923 -62179609 + MER33 DNA MER1_type 1 343 -20 402 57 0 0 chr5 140906083 140906136 -62179396 + (TG)n Simple_repeat Simple_repeat 2 54 0 11219 187 36 68 chr5 140957254 140957617 -62127915 + L1MA9 LINE L1 2810 3183 -4548 2264 68 0 4 chr5 140957617 140957926 -62127606 + AluY SINE Alu 1 308 0 11219 187 36 68 chr5 140957926 140960379 -62125153 + L1MA9 LINE L1 3183 5713 -2018 1508 157 105 21 chr5 140960379 140960665 -62124867 + AluSg SINE Alu 1 310 0 11219 187 36 68 chr5 140960665 140961155 -62124377 + L1MA9 LINE L1 5713 6217 -1514 974 150 28 142 chr5 140961155 140961409 -62124123 + AluJo SINE Alu 63 287 -25 11219 187 36 68 chr5 140961409 140962917 -62122615 + L1MA9 LINE L1 6217 7726 -5 800 236 76 17 chr5 140962920 140963157 -62122375 + L1MB7 LINE L1 5814 6064 -120 276 234 43 11 chr5 140963130 140963224 -62122308 + L1MB8 LINE L1 6066 6162 -16 * 268 79 0 0 chr5 140963260 140963298 -62122234 + L1MB8 LINE L1 5728 5765 -413 768 119 24 0 chr5 140963315 140963441 -62122091 + L1MB8 LINE L1 6041 6169 -9 185 246 0 72 chr5 140963463 140963532 -62122000 + L2 LINE L2 2702 2765 -549 1796 151 9 69 chr5 140963534 140963946 -62121586 - AluJo SINE Alu 0 392 1 2725 171 196 122 chr5 140963946 140964452 -62121080 + L1MD3 LINE L1 6737 7204 -791 493 229 8 53 chr5 140964452 140964583 -62120949 + MLT1F1 LTR MaLR 1 125 -442 2725 171 196 122 chr5 140964583 140965118 -62120414 + L1MD3 LINE L1 7204 7995 0 751 305 67 19 chr5 140965140 140965555 -62119977 + L2 LINE L2 2757 3186 -127 1561 185 75 81 chr5 140965557 140966065 -62119467 + MLT1D LTR MaLR 1 505 0 996 179 0 6 chr5 140966356 140966524 -62119008 - FRAM SINE Alu -10 166 1 306 267 30 30 chr5 140967089 140967220 -62118312 - MLT1K LTR MaLR -23 565 435 1160 220 5 0 chr5 140967440 140967663 -62117869 + MER58A DNA MER1_type 1 224 0 466 297 118 33 chr5 140967934 140968146 -62117386 - MIR SINE MIR -21 241 12 732 187 90 12 chr5 140968320 140968486 -62117046 + L1PB4 LINE L1 5970 6148 -8 239 300 100 0 chr5 140968681 140968811 -62116721 - MER103 DNA DNA -22 144 2 1733 219 160 64 chr5 140970068 140970788 -62114744 - MER21B LTR ERV1 -52 811 23 69 78 0 0 chr5 140972781 140972934 -62112598 + AT_rich Low_complexity Low_complexity 1 153 0 208 369 90 9 chr5 140973015 140973126 -62112406 - MIR3 SINE MIR -25 183 64 449 252 37 37 chr5 140973128 140973263 -62112269 - L2 LINE L2 -19 3294 3160 28 38 0 19 chr5 140974080 140974108 -62111424 + AT_rich Low_complexity Low_complexity 1 29 -23 2278 108 3 0 chr5 140974108 140974414 -62111118 + AluSp SINE Alu 1 307 -6 28 38 0 19 chr5 140974414 140974438 -62111094 + AT_rich Low_complexity Low_complexity 29 52 0 2219 138 0 0 chr5 140974642 140974954 -62110578 - AluSx SINE Alu 0 312 1 2340 93 3 3 chr5 140975977 140976289 -62109243 + AluSp SINE Alu 1 312 -1 21 0 0 0 chr5 140976334 140976355 -62109177 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 0 27 chr5 140976485 140976560 -62108972 + MIR SINE MIR 189 261 -1 828 281 45 16 chr5 140980982 140981351 -62104181 - LTR16A LTR ERVL 0 457 73 721 262 202 17 chr5 140981489 140981959 -62103573 - MLT1G LTR MaLR 0 590 34 321 140 0 0 chr5 140982170 140982227 -62103305 + (CA)n Simple_repeat Simple_repeat 1 57 0 527 304 105 56 chr5 140983873 140984377 -62101155 + L2 LINE L2 2241 2769 -545 474 194 72 21 chr5 140984377 140984616 -62100916 + MER33 DNA MER1_type 1 343 -20 402 57 0 0 chr5 140984776 140984829 -62100703 + (TG)n Simple_repeat Simple_repeat 2 54 0 1903 216 25 41 chr5 140986551 140987064 -62098468 - MLT1D LTR MaLR 0 505 1 2903 6 0 0 chr5 140988282 140988597 -62096935 - AluYb8 SINE Alu -3 315 1 586 173 73 86 chr5 140988903 140989123 -62096409 + MER112 DNA MER1_type 1 217 -43 268 263 202 66 chr5 140990742 140990940 -62094592 - L2 LINE L2 -254 3059 2835 288 214 12 0 chr5 140990953 140991037 -62094495 + MER53 DNA DNA 97 181 -8 1942 273 82 32 chr5 140991079 140991481 -62094051 - L1MC4a LINE L1 -750 5396 5016 1562 164 50 33 chr5 140991481 140991780 -62093752 - AluJb SINE Alu -8 304 1 1942 273 82 32 chr5 140991780 140992474 -62093058 - L1MC4a LINE L1 -1130 5016 5101 3417 72 0 4 chr5 140992474 140992931 -62092601 - L1PA13 LINE L1 -3 6160 5706 1942 273 82 32 chr5 140992931 140993266 -62092266 - L1MC4a LINE L1 -1044 5102 4785 988 256 90 3 chr5 140993272 140993593 -62091939 - L2 LINE L2 -772 2542 2194 212 333 144 0 chr5 140993615 140993705 -62091827 - MIR SINE MIR -112 150 48 1691 193 32 11 chr5 140993716 140994090 -62091442 - MLT1B LTR MaLR 0 390 9 1845 217 99 44 chr5 140994137 140994662 -62090870 - MLT2B3 LTR ERVL 0 554 1 2121 137 0 7 chr5 140994733 140995039 -62090493 + AluSx SINE Alu 1 304 -8 1955 35 0 0 chr5 140996096 140996326 -62089206 + L1PA5 LINE L1 5912 6141 -13 870 83 0 0 chr5 140996326 140996446 -62089086 + (TA)n Simple_repeat Simple_repeat 1 120 0 1325 222 52 0 chr5 140996599 140996715 -62088817 + AluJo SINE Alu 1 110 -202 276 53 0 0 chr5 140996715 140996753 -62088779 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 1325 222 52 0 chr5 140996753 140996924 -62088608 + AluJo SINE Alu 110 303 -9 1780 129 58 41 chr5 140997034 140997398 -62088134 + THE1C LTR MaLR 1 370 -5 472 141 22 4 chr5 140998551 140998682 -62086850 + MER53 DNA DNA 1 186 -3 36 0 0 0 chr5 140999108 140999144 -62086388 + AT_rich Low_complexity Low_complexity 1 36 0 1479 161 79 4 chr5 140999144 140999398 -62086134 - AluJb SINE Alu -39 273 1 2075 119 35 54 chr5 141000479 141000850 -62084682 - THE1B LTR MaLR 0 364 1 306 0 0 0 chr5 141000855 141000889 -62084643 + (CA)n Simple_repeat Simple_repeat 1 34 0 2124 128 127 81 chr5 141000988 141001557 -62083975 - LTR49 LTR ERV1 0 595 1 2136 214 40 27 chr5 141001776 141002303 -62083229 + MLT1F LTR MaLR 5 538 -4 2052 241 52 50 chr5 141002481 141003199 -62082333 - MER72 LTR ERV1 0 722 4 693 291 97 0 chr5 141003226 141003463 -62082069 + MIR SINE MIR 1 260 -2 1934 247 212 20 chr5 141004799 141005837 -62079695 + HAL1 LINE L1 623 1859 -648 21 0 0 0 chr5 141006360 141006381 -62079151 + AT_rich Low_complexity Low_complexity 1 21 0 463 160 32 0 chr5 141007682 141007838 -62077694 + (TG)n Simple_repeat Simple_repeat 1 161 0 570 124 22 22 chr5 141007861 141008039 -62077493 + (TG)n Simple_repeat Simple_repeat 2 179 0 189 158 79 0 chr5 141008933 141008971 -62076561 - L3 LINE CR1 -776 801 761 2258 114 0 0 chr5 141009678 141009986 -62075546 + AluY SINE Alu 1 308 -3 26 30 0 0 chr5 141010011 141010044 -62075488 + AT_rich Low_complexity Low_complexity 1 33 0 1603 159 75 29 chr5 141011262 141011607 -62073925 - MER46B DNA MER2_type 0 236 1 460 0 16 16 chr5 141012199 141012260 -62073272 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 1060 227 90 4 chr5 141013806 141014083 -62071449 + MER58B DNA MER1_type 41 341 0 1782 147 40 0 chr5 141014700 141015005 -62070527 - AluSx SINE Alu 0 316 1 186 133 0 0 chr5 141015091 141015121 -62070411 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 565 320 66 22 chr5 141015575 141015803 -62069729 + MIR SINE MIR 11 248 -14 422 176 37 46 chr5 141016042 141016150 -62069382 - MIR SINE MIR -25 237 131 189 254 109 18 chr5 141017603 141017658 -62067874 - MIR SINE MIR -63 145 86 264 184 172 11 chr5 141019106 141019193 -62066339 - MER4D LTR ERV1 -74 829 729 182 380 13 0 chr5 141019205 141019284 -62066248 + MIR SINE MIR 78 157 -105 401 279 89 69 chr5 141019896 141020069 -62065463 + MLT1I LTR MaLR 158 339 -70 2103 137 0 0 chr5 141020069 141020361 -62065171 + AluSx SINE Alu 1 292 -20 401 279 89 69 chr5 141020361 141020434 -62065098 + MLT1I LTR MaLR 339 409 0 3053 165 0 0 chr5 141020941 141021474 -62064058 - L1MA4 LINE L1 -280 6020 5488 5779 165 47 25 chr5 141021484 141022710 -62062822 + L1 LINE L1 4077 5338 -821 1486 51 0 0 chr5 141022710 141022888 -62062644 + L1PA3 LINE L1 5967 6144 -11 5779 165 47 25 chr5 141022888 141022969 -62062563 + L1 LINE L1 5338 5416 -743 195 170 0 0 chr5 141024283 141024330 -62061202 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 305 345 54 35 chr5 141024713 141024974 -62060558 - HAL1 LINE L1 -21 2486 2221 200 139 0 47 chr5 141025291 141025334 -62060198 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 188 287 32 75 chr5 141025535 141025629 -62059903 + MER5A DNA MER1_type 7 96 -93 333 251 31 68 chr5 141026420 141026611 -62058921 - L2 LINE L2 -1324 1990 1807 244 158 0 0 chr5 141026692 141026730 -62058802 - MER91 DNA MER1_type -84 56 19 186 279 12 23 chr5 141027372 141027458 -62058074 + L3b LINE CR1 1114 1198 -385 346 284 12 0 chr5 141027773 141027854 -62057678 + L3b LINE CR1 1414 1495 -88 2452 74 3 0 chr5 141035251 141035547 -62049985 + AluSp SINE Alu 1 297 -16 31 44 0 0 chr5 141036424 141036469 -62049063 + AT_rich Low_complexity Low_complexity 1 45 0 350 127 32 0 chr5 141039631 141039694 -62045838 - Alu SINE Alu -3 299 235 2472 62 0 0 chr5 141041265 141041557 -62043975 - AluY SINE Alu -19 292 1 183 42 0 0 chr5 141041920 141041944 -62043588 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 403 270 0 0 chr5 141042441 141042541 -62042991 - MIR3 SINE MIR -23 185 86 222 91 0 0 chr5 141042885 141042918 -62042614 + (T)n Simple_repeat Simple_repeat 1 33 0 393 342 116 9 chr5 141043237 141043462 -62042070 - L3 LINE CR1 -73 1504 1256 1479 192 101 48 chr5 141043468 141043905 -62041627 + LTR40b LTR ERVL 1 460 -2 391 322 94 45 chr5 141043917 141044119 -62041413 - L3 LINE CR1 -358 1219 1008 469 256 25 31 chr5 141044135 141044295 -62041237 - L3 LINE CR1 -828 749 591 1815 121 8 0 chr5 141044819 141045076 -62040456 + AluSq SINE Alu 1 259 -54 219 36 0 0 chr5 141045101 141045129 -62040403 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 186 273 91 13 chr5 141045131 141045208 -62040324 + MIR3 SINE MIR 102 184 -24 182 385 26 0 chr5 141045261 141045339 -62040193 - MIR SINE MIR -135 127 48 524 268 142 22 chr5 141045603 141045786 -62039746 + MIR SINE MIR 52 256 -6 199 246 133 42 chr5 141046140 141046246 -62039286 + MIR SINE MIR 34 152 -93 352 261 58 43 chr5 141047201 141047339 -62038193 - L2 LINE L2 0 3313 3174 188 359 38 47 chr5 141047812 141047918 -62037614 + L2 LINE L2 3160 3264 -8 467 296 164 6 chr5 141049075 141049234 -62036298 + MIR3 SINE MIR 21 204 -4 360 43 0 0 chr5 141049907 141049953 -62035579 + (CA)n Simple_repeat Simple_repeat 2 47 0 1379 179 65 13 chr5 141050332 141050640 -62034892 - MER33 DNA MER1_type 0 324 1 252 354 18 35 chr5 141051222 141051335 -62034197 + MIR SINE MIR 52 139 -69 193 293 0 81 chr5 141051313 141051412 -62034120 - MIR SINE MIR 0 262 172 * 1501 205 0 48 chr5 141051740 141052052 -62033480 - AluJo SINE Alu -15 297 1 261 302 129 36 chr5 141052199 141052338 -62033194 - MIR SINE MIR -93 169 18 317 315 0 0 chr5 141052665 141052754 -62032778 - L1MC4 LINE L1 -1339 6703 6615 264 30 0 0 chr5 141052895 141052928 -62032604 + (CA)n Simple_repeat Simple_repeat 2 34 0 630 308 107 0 chr5 141053366 141053600 -62031932 - MIR SINE MIR -3 259 1 2659 106 59 12 chr5 141054259 141054640 -62030892 + MLT2A1 LTR ERVL 2 406 -38 608 0 14 0 chr5 141054640 141054712 -62030820 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 2659 106 59 12 chr5 141054712 141054753 -62030779 + MLT2A1 LTR ERVL 406 444 0 41343 76 8 13 chr5 141054753 141060415 -62025117 + HERVL-A1 LTR ERVL 1 5635 -19 1768 129 35 46 chr5 141060418 141060766 -62024766 + MLT2A1 LTR ERVL 101 444 0 21 0 0 0 chr5 141060918 141060939 -62024593 + AT_rich Low_complexity Low_complexity 1 21 0 2148 109 0 26 chr5 141061438 141061741 -62023791 + AluY SINE Alu 1 295 -16 306 221 53 18 chr5 141062815 141062928 -62022604 + L1MC5 LINE L1 7718 7834 -127 293 195 0 39 chr5 141062964 141063041 -62022491 + L1MC5 LINE L1 7835 7908 -53 1056 292 75 9 chr5 141063270 141063698 -62021834 - MLT1F1 LTR MaLR -20 547 92 829 233 29 117 chr5 141063745 141064191 -62021341 - MLT1F1-int LTR MaLR 0 1371 965 866 169 84 2 chr5 141064200 141064382 -62021150 - MLT1B LTR MaLR -7 367 187 212 184 20 0 chr5 141064384 141064433 -62021099 + GA-rich Low_complexity Low_complexity 2 51 0 197 289 0 0 chr5 141064669 141064721 -62020811 - L2 LINE L2 0 3313 3262 24 67 0 0 chr5 141064914 141064959 -62020573 + AT_rich Low_complexity Low_complexity 1 45 0 786 348 67 19 chr5 141067490 141067866 -62017666 - L2 LINE L2 0 3272 2879 947 243 104 33 chr5 141067867 141068204 -62017328 + L1MC4 LINE L1 6729 7089 -953 1337 214 70 20 chr5 141068204 141068606 -62016926 + L1MC4a LINE L1 7158 7579 -229 391 238 86 43 chr5 141068601 141068811 -62016721 + L1MC4 LINE L1 7685 7903 -139 * 241 192 0 0 chr5 141068815 141068867 -62016665 + L1MC4 LINE L1 7991 8042 0 236 214 72 21 chr5 141069039 141069144 -62016388 - MLT1E2 LTR MaLR 0 654 353 * 822 230 100 65 chr5 141069135 141069505 -62016027 - MLT1E2 LTR MaLR -243 383 1 293 333 106 0 chr5 141069658 141069781 -62015751 + L2 LINE L2 3137 3272 0 604 281 117 36 chr5 141070203 141070812 -62014720 - L1ME4a LINE L1 -40 6081 5409 1132 287 81 32 chr5 141070980 141071412 -62014120 + MLT1E LTR MaLR 1 453 -140 28 71 0 0 chr5 141073687 141073743 -62011789 + AT_rich Low_complexity Low_complexity 1 56 0 475 352 56 13 chr5 141074122 141074355 -62011177 + MIR SINE MIR 7 249 -13 246 62 0 0 chr5 141078038 141078070 -62007462 + (CA)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr5 141078404 141078426 -62007106 + AT_rich Low_complexity Low_complexity 1 22 0 228 250 192 25 chr5 141078809 141078929 -62006603 + MLT1K LTR MaLR 82 221 -367 187 292 101 22 chr5 141079687 141079776 -62005756 + L2 LINE L2 3175 3270 -2 368 279 242 5 chr5 141080180 141080399 -62005133 - L2 LINE L2 -1400 1914 1644 517 298 87 19 chr5 141080429 141080681 -62004851 + L2 LINE L2 2989 3308 -5 212 167 0 0 chr5 141081549 141081591 -62003941 + T-rich Low_complexity Low_complexity 1 42 0 405 231 139 9 chr5 141081696 141081804 -62003728 + L2 LINE L2 3192 3313 0 22 0 0 0 chr5 141082786 141082808 -62002724 + AT_rich Low_complexity Low_complexity 1 22 0 1314 92 0 0 chr5 141082873 141083047 -62002485 - AluY SINE Alu -8 303 130 389 224 0 0 chr5 141084452 141084528 -62001004 + L2 LINE L2 3238 3313 0 2168 125 7 0 chr5 141084968 141085271 -62000261 - AluSx SINE Alu -7 305 1 447 85 0 0 chr5 141085562 141085666 -61999866 + Alu SINE Alu 220 323 0 255 355 32 8 chr5 141086408 141086532 -61999000 - L2 LINE L2 -202 3070 2944 2361 93 10 3 chr5 141087026 141087328 -61998204 + AluSc SINE Alu 1 304 -5 844 247 120 53 chr5 141087396 141088117 -61997415 - L2 LINE L2 0 3313 1607 345 165 55 33 chr5 141089137 141089228 -61996304 + L1MC5 LINE L1 7840 7932 -29 401 280 57 46 chr5 141089331 141089526 -61996006 + MIR3 SINE MIR 2 196 -52 986 159 48 35 chr5 141089682 141089909 -61995623 - MSTA LTR MaLR 0 428 199 1237 156 10 38 chr5 141089944 141090214 -61995318 - MSTA LTR MaLR -160 266 1 401 198 216 0 chr5 141092647 141092664 -61992868 - L1MA10 LINE L1 -10 6324 6308 2628 226 59 25 chr5 141092664 141092995 -61992537 - L1ME1 LINE L1 -34 6132 5814 2156 142 88 32 chr5 141092995 141093404 -61992128 + MSTB1 LTR MaLR 1 432 0 2628 226 59 25 chr5 141093404 141093710 -61991822 - L1ME1 LINE L1 -352 5814 5520 2407 81 3 0 chr5 141093710 141094007 -61991525 + AluSp SINE Alu 1 298 -15 2628 226 59 25 chr5 141094007 141094443 -61991089 - L1ME1 LINE L1 -646 5520 5021 5435 160 35 10 chr5 141094477 141095144 -61990388 - L1MA6 LINE L1 -9 6291 5642 1646 166 85 18 chr5 141095144 141095427 -61990105 - AluSx SINE Alu -10 302 1 5435 160 35 10 chr5 141095427 141097416 -61988116 - L1MA6 LINE L1 -658 5642 3383 368 302 20 69 chr5 141097423 141097625 -61987907 + LTR16A LTR ERVL 106 297 -153 397 261 58 0 chr5 141098520 141098658 -61986874 - MLT1I LTR MaLR -246 163 18 240 130 0 0 chr5 141098684 141098730 -61986802 + (A)n Simple_repeat Simple_repeat 1 46 0 3946 125 14 8 chr5 141099507 141100170 -61985362 - L1MA3 LINE L1 0 6305 5639 312 294 0 22 chr5 141100173 141100265 -61985267 + L1MC4 LINE L1 6614 6703 -1339 195 129 0 0 chr5 141100265 141100296 -61985236 + (TA)n Simple_repeat Simple_repeat 2 32 0 365 100 117 0 chr5 141100296 141100356 -61985176 - L1M1 LINE L1 -656 5648 5582 1958 133 136 16 chr5 141100356 141100738 -61984794 - MSTA LTR MaLR 0 428 1 8649 177 20 10 chr5 141100743 141102372 -61983160 - MSTA-int LTR MaLR -6 1645 1 2212 128 123 5 chr5 141102372 141102755 -61982777 - MSTA LTR MaLR 0 428 1 6559 153 12 4 chr5 141102755 141104239 -61981293 - L1M1 LINE L1 -719 5586 4093 2366 100 0 0 chr5 141105291 141105600 -61979932 + AluSc SINE Alu 1 309 0 521 185 68 6 chr5 141105628 141105790 -61979742 - Looper DNA T2_type 0 1558 1387 3410 188 61 29 chr5 141105796 141106088 -61979444 - Looper DNA T2_type -598 960 679 1161 203 42 10 chr5 141106088 141106399 -61979133 - MER33 DNA MER1_type -1 323 3 3410 188 61 29 chr5 141106399 141107036 -61978496 - Looper DNA T2_type -879 679 1 23419 172 19 22 chr5 141107250 141107913 -61977619 + L1PA10 LINE L1 618 1281 -5202 2215 102 6 13 chr5 141107913 141108228 -61977304 + AluSp SINE Alu 1 313 0 23419 172 19 22 chr5 141108228 141109624 -61975908 + L1PA10 LINE L1 1281 2679 -3804 2264 124 0 0 chr5 141109624 141109930 -61975602 - AluSx SINE Alu -6 306 1 23419 172 19 22 chr5 141109930 141113736 -61971796 + L1PA10 LINE L1 2679 6472 -11 402 329 44 6 chr5 141114056 141114214 -61971318 - MIR SINE MIR -27 235 72 430 267 166 37 chr5 141114233 141114529 -61971003 - LTR67 LTR ERVL 0 557 224 264 268 0 0 chr5 141114578 141114649 -61970883 - MST-int LTR MaLR -1394 257 187 40749 35 21 1 chr5 141114660 141120680 -61964852 - L1PA2 LINE L1 -6 6149 6 560 301 55 11 chr5 141120691 141120874 -61964658 - LTR67 LTR ERVL -364 193 3 217 235 20 0 chr5 141120895 141120946 -61964586 - MIR SINE MIR -102 160 109 32 0 0 0 chr5 141121319 141121351 -61964181 + AT_rich Low_complexity Low_complexity 1 32 0 1715 175 0 7 chr5 141121804 141122090 -61963442 - AluJb SINE Alu -28 284 1 444 286 8 32 chr5 141122765 141122891 -61962641 + L2 LINE L2 3150 3272 0 855 269 110 32 chr5 141123689 141124162 -61961370 + LTR33 LTR ERVL 12 521 0 278 306 14 0 chr5 141124164 141124236 -61961296 - MIR SINE MIR -62 146 74 2503 54 0 13 chr5 141124536 141124850 -61960682 + AluY SINE Alu 1 310 -1 216 224 184 0 chr5 141125524 141125600 -61959932 - MIR SINE MIR -3 259 170 221 171 0 0 chr5 141127793 141127834 -61957698 + T-rich Low_complexity Low_complexity 1 41 0 40823 34 21 2 chr5 141127835 141133862 -61951670 - L1PA3 LINE L1 -3 6152 5 2023 117 37 0 chr5 141134144 141134442 -61951090 + AluSp SINE Alu 3 311 -2 366 23 0 0 chr5 141135199 141135242 -61950290 + (CA)n Simple_repeat Simple_repeat 2 44 0 2124 77 0 4 chr5 141136606 141136878 -61948654 + AluY SINE Alu 28 298 -13 3168 152 32 84 chr5 141136925 141137654 -61947878 - LTR8 LTR ERV1 0 691 1 288 0 0 0 chr5 141138496 141138528 -61947004 + (CA)n Simple_repeat Simple_repeat 2 33 0 240 35 0 0 chr5 141138550 141138579 -61946953 + (TG)n Simple_repeat Simple_repeat 2 30 0 367 279 61 41 chr5 141139801 141139948 -61945584 + MIR SINE MIR 46 195 -67 1863 181 5 40 chr5 141139979 141140354 -61945178 + MLT1A1 LTR MaLR 4 365 0 775 184 12 0 chr5 141140813 141140976 -61944556 - HSMAR2 DNA Mariner -1 1301 1137 202 286 0 0 chr5 141141225 141141267 -61944265 - MER5A DNA MER1_type -99 90 49 374 70 0 18 chr5 141141347 141141404 -61944128 + AluY SINE Alu 89 144 -157 630 77 33 0 chr5 141141404 141141495 -61944037 + AluSg/x SINE Alu 215 308 -1 727 255 10 26 chr5 141141981 141142173 -61943359 - L2 LINE L2 0 3313 3125 201 234 0 0 chr5 141142292 141142339 -61943193 + (TG)n Simple_repeat Simple_repeat 2 48 0 255 279 0 0 chr5 141143651 141143712 -61941820 - L2 LINE L2 -2 3311 3251 699 313 149 35 chr5 141143806 141144442 -61941090 + L2 LINE L2 2148 2856 -458 184 345 84 35 chr5 141144655 141144797 -61940735 + L2 LINE L2 3007 3155 -117 212 353 163 8 chr5 141144930 141145188 -61940344 - L2 LINE L2 -569 2745 2448 1452 122 22 0 chr5 141145400 141145622 -61939910 + MER30 DNA MER1_type 3 229 -1 1499 197 74 21 chr5 141145918 141146350 -61939182 + Charlie1b DNA MER1_type 69 523 0 225 0 0 0 chr5 141147373 141147398 -61938134 + (A)n Simple_repeat Simple_repeat 1 25 0 2650 154 13 25 chr5 141148610 141148735 -61936797 + MLT1C LTR MaLR 1 126 -341 2468 82 0 0 chr5 141148735 141149040 -61936492 + AluSg SINE Alu 1 305 -5 2650 154 13 25 chr5 141149040 141149387 -61936145 + MLT1C LTR MaLR 126 467 0 1271 308 117 10 chr5 141149974 141150169 -61935363 - L2 LINE L2 -809 2505 2332 294 29 0 0 chr5 141150169 141150204 -61935328 + (TG)n Simple_repeat Simple_repeat 2 36 0 1271 308 117 10 chr5 141150204 141150624 -61934908 - L2 LINE L2 -982 2332 1824 210 229 0 0 chr5 141150680 141150750 -61934782 + GA-rich Low_complexity Low_complexity 1 70 0 420 262 74 7 chr5 141150840 141150989 -61934543 - FRAM SINE Alu -17 159 1 303 249 32 108 chr5 141151907 141152092 -61933440 + MLT1K LTR MaLR 345 515 -73 392 264 80 80 chr5 141152132 141152431 -61933101 - L2 LINE L2 -1508 1806 1508 416 299 82 29 chr5 141152436 141152493 -61933039 - MLT1L LTR MaLR -4 611 558 1899 174 27 0 chr5 141152493 141152827 -61932705 - MER61A LTR ERV1 0 343 1 416 299 82 29 chr5 141152827 141152918 -61932614 - MLT1L LTR MaLR -57 558 473 1979 138 7 26 chr5 141152918 141153223 -61932309 + AluSx SINE Alu 1 299 -13 416 299 82 29 chr5 141153223 141153317 -61932215 - MLT1L LTR MaLR -142 473 355 3578 111 5 11 chr5 141153652 141154213 -61931319 + THE1B-int LTR MaLR 1023 1580 0 2263 149 5 24 chr5 141154213 141154582 -61930950 + THE1B LTR MaLR 1 362 -2 3335 254 59 7 chr5 141154584 141154624 -61930908 - L1M4 LINE L1 -1839 4307 4271 189 0 0 0 chr5 141154624 141154645 -61930887 + (TG)n Simple_repeat Simple_repeat 2 22 0 3335 254 59 7 chr5 141154645 141155364 -61930168 - L1M4 LINE L1 -1875 4271 3467 222 37 0 0 chr5 141155364 141155391 -61930141 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 3335 254 59 7 chr5 141155391 141155772 -61929760 - L1M4 LINE L1 -2679 3467 3107 254 203 0 0 chr5 141155773 141155832 -61929700 - L1M4 LINE L1 -3093 3053 2995 212 211 19 0 chr5 141155852 141155904 -61929628 + (TA)n Simple_repeat Simple_repeat 1 53 0 2351 90 0 0 chr5 141155921 141156211 -61929321 - AluY SINE Alu -21 290 1 2551 99 10 10 chr5 141156352 141156735 -61928797 - L1PB1 LINE L1 -2 6149 5767 230 175 0 35 chr5 141156735 141156792 -61928740 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3580 157 0 15 chr5 141156792 141157800 -61927732 - L1PB1 LINE L1 -360 5791 4801 430 331 15 74 chr5 141157975 141158313 -61927219 - L2 LINE L2 -1842 1472 1155 4204 267 61 48 chr5 141158356 141160151 -61925381 - L1MB5 LINE L1 0 6174 4404 3046 188 7 9 chr5 141160151 141160710 -61924822 + MER74A LTR ERVL 1 558 0 4204 267 61 48 chr5 141160710 141160752 -61924780 - L1MB5 LINE L1 -1770 4404 4364 2584 112 6 8 chr5 141160752 141161117 -61924415 + THE1B LTR MaLR 1 364 0 6142 116 15 3 chr5 141161117 141162045 -61923487 + THE1B-int LTR MaLR 1 939 -641 4204 267 61 48 chr5 141162045 141162435 -61923097 - L1MB5 LINE L1 -1810 4364 3981 1693 169 10 0 chr5 141162435 141162725 -61922807 - AluSg SINE Alu -16 294 2 4204 267 61 48 chr5 141162725 141163101 -61922431 - L1MB5 LINE L1 -2193 3981 3611 189 0 0 0 chr5 141163101 141163122 -61922410 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4204 267 61 48 chr5 141163122 141163592 -61921940 - L1MB5 LINE L1 -2563 3611 2118 1237 148 8 38 chr5 141165269 141165506 -61920026 + MSTA LTR MaLR 1 230 -198 299 155 42 0 chr5 141165506 141165577 -61919955 + CT-rich Low_complexity Low_complexity 2 75 0 761 195 49 35 chr5 141165577 141165803 -61919729 + MSTA LTR MaLR 199 427 -1 24 32 0 0 chr5 141166079 141166110 -61919422 + GC_rich Low_complexity Low_complexity 1 31 0 1214 136 0 0 chr5 141166317 141166486 -61919046 + AluSc SINE Alu 120 288 -21 27 29 0 0 chr5 141167409 141167443 -61918089 + AT_rich Low_complexity Low_complexity 1 34 0 26 50 0 0 chr5 141167487 141167527 -61918005 + AT_rich Low_complexity Low_complexity 1 40 0 219 221 10 92 chr5 141167528 141167723 -61917809 + T-rich Low_complexity Low_complexity 2 180 0 2062 248 18 26 chr5 141169805 141170235 -61915297 - L1M4 LINE L1 -3169 3213 2781 1795 170 0 0 chr5 141170235 141170506 -61915026 + AluSx SINE Alu 34 304 -8 2062 248 18 26 chr5 141170506 141171047 -61914485 - L1M4 LINE L1 -3601 2781 2252 463 254 0 0 chr5 141171082 141171196 -61914336 - L1M4 LINE L1 -5116 1268 1155 1278 224 44 36 chr5 141171202 141171564 -61913968 + MLT1A1 LTR MaLR 1 365 0 1721 213 104 9 chr5 141171564 141171987 -61913545 + MLT1A1-int LTR MaLR 3 465 -1270 369 118 4 16 chr5 141171967 141172041 -61913491 + MLT1A1-int LTR MaLR 609 694 -677 * 280 233 0 0 chr5 141172046 141172106 -61913426 + MLT1A1-int LTR MaLR 824 883 -488 813 278 4 52 chr5 141172453 141172705 -61912827 + MLT1A1-int LTR MaLR 1262 1501 -234 1903 150 35 5 chr5 141172730 141173104 -61912428 - L1MA4 LINE L1 -5 6295 5911 21 36 0 0 chr5 141173254 141173282 -61912250 + AT_rich Low_complexity Low_complexity 1 28 0 396 285 15 22 chr5 141173817 141173954 -61911578 + L1M4c LINE L1 293 428 -6218 1171 237 83 33 chr5 141173976 141174432 -61911100 + L1M4c LINE L1 836 1314 -5228 1438 203 36 14 chr5 141174433 141174546 -61910986 + AluJo SINE Alu 2 111 -201 2676 93 11 11 chr5 141174546 141174921 -61910611 - THE1C LTR MaLR 0 375 1 222 37 0 0 chr5 141174928 141174955 -61910577 + (TA)n Simple_repeat Simple_repeat 1 27 0 1438 203 36 14 chr5 141174955 141175114 -61910418 + AluJo SINE Alu 116 288 -24 644 169 8 0 chr5 141175119 141175249 -61910283 + GA-rich Low_complexity Low_complexity 3 133 0 493 196 1 10 chr5 141175249 141175374 -61910158 + L1M4c LINE L1 1310 1523 -5121 276 137 0 39 chr5 141175374 141175425 -61910107 - MLT1A2 LTR MaLR 0 374 326 965 93 0 0 chr5 141175425 141175554 -61909978 + L1PA16 LINE L1 6029 6157 -9 269 323 0 0 chr5 141175580 141175645 -61909887 - MIR SINE MIR -113 95 31 243 287 48 100 chr5 141175925 141176176 -61909356 + MIR SINE MIR 19 256 -6 440 296 85 6 chr5 141176248 141176424 -61909108 - MLT1L LTR MaLR -9 606 417 512 278 20 56 chr5 141176733 141176931 -61908601 + MIR SINE MIR 72 262 0 1772 174 14 3 chr5 141177413 141177706 -61907826 + AluJb SINE Alu 1 296 -16 725 199 17 55 chr5 141177809 141177990 -61907542 - MIR SINE MIR -30 232 59 1280 95 0 6 chr5 141177990 141178159 -61907373 - AluSg/x SINE Alu -19 293 126 187 281 73 37 chr5 141178407 141178489 -61907043 + L2 LINE L2 3227 3311 -2 536 86 0 11 chr5 141180135 141180228 -61905304 + (TA)n Simple_repeat Simple_repeat 1 92 0 474 271 100 35 chr5 141180925 141181095 -61904437 - MER5A DNA MER1_type 0 189 9 208 103 51 0 chr5 141181119 141181158 -61904374 + (TA)n Simple_repeat Simple_repeat 2 42 0 202 352 9 19 chr5 141181366 141181474 -61904058 - L3b LINE CR1 -345 1238 1132 216 0 0 0 chr5 141182780 141182804 -61902728 + (A)n Simple_repeat Simple_repeat 1 24 0 210 326 44 57 chr5 141183848 141184075 -61901457 + L2 LINE L2 2814 3037 -235 714 229 104 30 chr5 141184137 141184518 -61901014 - MER57A LTR ERV1 0 403 1 245 273 106 61 chr5 141184546 141184678 -61900854 + L2 LINE L2 3168 3305 -8 23 0 0 0 chr5 141185212 141185235 -61900297 + AT_rich Low_complexity Low_complexity 1 23 0 282 275 11 22 chr5 141186959 141187050 -61898482 + LTR67 LTR ERVL 457 546 -11 637 273 80 6 chr5 141187068 141187244 -61898288 + MER5A DNA MER1_type 1 189 0 312 387 36 10 chr5 141187614 141187808 -61897724 - MIR SINE MIR -46 216 18 22 70 0 0 chr5 141187878 141187921 -61897611 + AT_rich Low_complexity Low_complexity 1 43 0 400 193 122 77 chr5 141189349 141189577 -61895955 + MIR SINE MIR 18 249 -13 234 273 91 23 chr5 141189790 141189922 -61895610 + L2 LINE L2 3100 3240 -73 204 205 0 0 chr5 141189943 141189998 -61895534 + (CAGT)n Simple_repeat Simple_repeat 1 55 0 276 173 0 19 chr5 141191225 141191277 -61894255 + L2 LINE L2 3261 3311 -2 21 82 0 0 chr5 141191538 141191587 -61893945 + AT_rich Low_complexity Low_complexity 1 49 0 309 174 104 70 chr5 141192243 141192358 -61893174 - Charlie8 DNA MER1_type -2255 162 44 775 267 87 51 chr5 141192517 141192906 -61892626 - MLT1J1 LTR MaLR -5 441 39 724 302 25 0 chr5 141194378 141194580 -61890952 + MIR SINE MIR 28 234 -28 492 232 24 8 chr5 141194724 141194849 -61890683 + MIR SINE MIR 129 255 -7 23 0 0 0 chr5 141195831 141195854 -61889678 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 141197311 141197336 -61888196 + AT_rich Low_complexity Low_complexity 1 25 0 2189 113 3 3 chr5 141197989 141198291 -61887241 + AluY SINE Alu 1 302 -9 405 291 91 5 chr5 141198852 141199051 -61886481 - LTR67 LTR ERVL -51 506 291 268 264 11 22 chr5 141199154 141199245 -61886287 - LTR67 LTR ERVL -454 103 14 231 267 17 17 chr5 141199596 141199656 -61885876 - MER5A DNA MER1_type -1 188 129 2170 168 82 20 chr5 141199659 141200158 -61885374 + L1MB7 LINE L1 5607 6136 -48 235 339 161 0 chr5 141200187 141200305 -61885227 - MER5A DNA MER1_type -52 137 1 608 254 22 39 chr5 141200733 141200914 -61884618 - MER5B DNA MER1_type 0 178 1 314 320 16 0 chr5 141201077 141201202 -61884330 - L2 LINE L2 -242 3030 2904 2079 115 3 3 chr5 141202701 141202989 -61882543 + AluSx SINE Alu 1 288 -24 22 0 0 0 chr5 141202999 141203021 -61882511 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr5 141203278 141203313 -61882219 + AT_rich Low_complexity Low_complexity 1 35 0 188 132 0 26 chr5 141203418 141203456 -61882076 + (CA)n Simple_repeat Simple_repeat 1 37 0 484 291 49 20 chr5 141203509 141203712 -61881820 + MER63A DNA MER1_type 2 210 0 717 299 19 43 chr5 141204799 141205124 -61880408 - L2 LINE L2 -65 3248 2932 196 272 48 80 chr5 141207775 141207900 -61877632 - L3 LINE CR1 -12 1565 1445 2281 107 38 7 chr5 141208578 141209025 -61876507 + L1PA16 LINE L1 5386 5922 -244 1208 71 71 0 chr5 141209030 141209200 -61876332 + L1PA16 LINE L1 5980 6161 -5 22 35 0 0 chr5 141209200 141209229 -61876303 + AT_rich Low_complexity Low_complexity 1 29 0 2339 95 0 0 chr5 141210311 141210607 -61874925 - AluSq SINE Alu -16 297 2 457 334 35 98 chr5 141210862 141211179 -61874353 - L2 LINE L2 -5 3267 2971 1813 170 50 31 chr5 141212732 141213115 -61872417 - MLT1B LTR MaLR 0 390 1 354 123 0 0 chr5 141213755 141213812 -61871720 + (TG)n Simple_repeat Simple_repeat 1 57 0 447 337 61 14 chr5 141214441 141214805 -61870727 + L1ME4a LINE L1 5276 5659 -505 1637 173 76 82 chr5 141216365 141216902 -61868630 + MER34B LTR ERV1 12 545 -20 22 56 0 0 chr5 141217609 141217645 -61867887 + AT_rich Low_complexity Low_complexity 1 36 0 2106 119 41 25 chr5 141217933 141218295 -61867237 - THE1C LTR MaLR -7 368 1 7679 128 64 4 chr5 141218295 141219557 -61865975 - THE1C-int LTR MaLR 0 1580 243 1950 143 55 22 chr5 141219618 141219981 -61865551 - THE1C LTR MaLR 0 375 1 2071 106 3 31 chr5 141220118 141220411 -61865121 + AluSc SINE Alu 10 294 -15 190 239 65 0 chr5 141220608 141220654 -61864878 + L2 LINE L2 3202 3250 -22 518 249 120 35 chr5 141221599 141221965 -61863567 + L1ME4a LINE L1 5725 6121 0 31 44 0 0 chr5 141221977 141222022 -61863510 + AT_rich Low_complexity Low_complexity 1 45 0 429 299 8 0 chr5 141222324 141222441 -61863091 + MIR SINE MIR 145 262 0 45 19 0 0 chr5 141222985 141223037 -61862495 + AT_rich Low_complexity Low_complexity 1 52 0 430 301 70 44 chr5 141224384 141224501 -61861031 - Charlie8 DNA MER1_type -69 272 160 809 198 11 39 chr5 141224501 141224601 -61860931 + MER45A DNA AcHobo 1 95 -1486 1515 195 6 31 chr5 141224601 141224919 -61860613 - AluJo SINE Alu -2 310 1 809 198 11 39 chr5 141224919 141225000 -61860532 + MER45A DNA AcHobo 95 177 -1 430 301 70 44 chr5 141225000 141225111 -61860421 - Charlie8 DNA MER1_type -181 160 38 260 297 77 0 chr5 141225169 141225260 -61860272 - MIR3 SINE MIR -6 202 105 2391 84 0 13 chr5 141225431 141225739 -61859793 - AluY SINE Alu -7 304 1 2221 118 0 0 chr5 141225843 141226139 -61859393 - AluSx SINE Alu -16 296 1 224 230 27 40 chr5 141227883 141227957 -61857575 - MIR3 SINE MIR -24 184 112 352 221 52 103 chr5 141228292 141228410 -61857122 + L2 LINE L2 3185 3297 -16 2417 81 0 0 chr5 141228410 141228708 -61856824 + AluSg SINE Alu 1 298 -12 352 221 52 103 chr5 141228708 141228725 -61856807 + L2 LINE L2 3297 3313 0 2230 126 0 0 chr5 141228862 141229171 -61856361 - AluSq SINE Alu -4 309 1 180 0 0 0 chr5 141229221 141229241 -61856291 + (A)n Simple_repeat Simple_repeat 1 20 0 315 364 12 6 chr5 141229241 141229406 -61856126 + L2 LINE L2 2445 2610 -704 189 319 29 51 chr5 141229603 141229741 -61855791 + L2 LINE L2 2917 3051 -221 1543 103 5 19 chr5 141230010 141230223 -61855309 + AluSg/x SINE Alu 72 281 -31 682 74 11 32 chr5 141230223 141230268 -61855264 + AluSq SINE Alu 72 327 0 1586 105 0 5 chr5 141230268 141230477 -61855055 - AluSq SINE Alu -83 230 23 763 276 11 62 chr5 141230898 141231173 -61854359 + MIR SINE MIR 2 262 0 2132 137 0 7 chr5 141231348 141231654 -61853878 + AluSx SINE Alu 1 304 -8 400 381 57 0 chr5 141232580 141232756 -61852776 + MER91A DNA MER1_type 2 187 -9 212 274 20 0 chr5 141232776 141232827 -61852705 + MER91A DNA MER1_type 134 185 -5 2127 131 0 0 chr5 141233084 141233396 -61852136 + AluSx SINE Alu 1 312 0 2378 92 0 0 chr5 141233864 141234156 -61851376 - AluSg SINE Alu -18 292 1 266 353 38 0 chr5 141234156 141234289 -61851243 + L2 LINE L2 1616 1753 -1561 599 306 59 46 chr5 141234991 141235213 -61850319 - HERV16-C2 LTR ERVL -4517 479 248 2285 59 24 3 chr5 141235213 141235500 -61850032 + AluY SINE Alu 1 293 -18 599 306 59 46 chr5 141235500 141235669 -61849863 - HERV16-C2 LTR ERVL -4748 248 83 2118 123 3 0 chr5 141235891 141236214 -61849318 + AluSq SINE Alu 1 324 0 506 286 80 46 chr5 141236334 141236722 -61848810 + L2 LINE L2 1844 2244 -1070 1384 123 159 36 chr5 141236722 141237024 -61848508 + MER44D DNA MER2_type 1 609 0 12749 127 55 50 chr5 141237088 141239493 -61846039 - Tigger1 DNA MER2_type 0 2418 1 517 328 81 26 chr5 141239602 141239910 -61845622 + L2 LINE L2 2369 2693 -621 2165 168 10 68 chr5 141239912 141240394 -61845138 - MLT2C2 LTR ERVL -8 456 3 539 303 35 0 chr5 141240407 141240552 -61844980 + MIR SINE MIR 111 260 -2 320 332 60 87 chr5 141240660 141241030 -61844502 + L2 LINE L2 2850 3209 -63 204 219 0 0 chr5 141241433 141241474 -61844058 - L2 LINE L2 -84 3229 3189 264 311 0 0 chr5 141241739 141241813 -61843719 + MER5A DNA MER1_type 115 188 -1 356 315 39 16 chr5 141241818 141241945 -61843587 + MER5B DNA MER1_type 5 134 -44 466 296 39 29 chr5 141241967 141242247 -61843285 - L1MEd LINE L1 -4873 1246 964 657 298 81 57 chr5 141242333 141242705 -61842827 + L2 LINE L2 2892 3272 0 2284 107 7 0 chr5 141243408 141243708 -61841824 - AluSp SINE Alu -11 302 1 2071 131 3 0 chr5 141243773 141244063 -61841469 + AluSx SINE Alu 1 291 -21 280 318 47 68 chr5 141244876 141245024 -61840508 - MER5A DNA MER1_type -19 170 26 180 0 0 0 chr5 141245329 141245349 -61840183 + (A)n Simple_repeat Simple_repeat 1 20 0 1707 153 52 122 chr5 141245630 141246132 -61839400 + L1MB3 LINE L1 5715 6181 -2 2191 100 0 7 chr5 141247266 141247567 -61837965 + AluY SINE Alu 1 299 -12 201 74 0 0 chr5 141250399 141250426 -61835106 + (T)n Simple_repeat Simple_repeat 1 27 0 212 324 94 47 chr5 141250716 141250886 -61834646 + MIR3 SINE MIR 31 208 0 1045 171 0 6 chr5 141251002 141251172 -61834360 + AluSq SINE Alu 1 169 -144 761 293 67 17 chr5 141251267 141251441 -61834091 + MIR SINE MIR 4 196 -66 2149 108 0 3 chr5 141251441 141251750 -61833782 + AluSq SINE Alu 1 308 0 761 293 67 17 chr5 141251750 141251813 -61833719 + MIR SINE MIR 196 254 -8 280 253 13 27 chr5 141251862 141251937 -61833595 - L3 LINE CR1 -136 1441 1368 198 0 0 0 chr5 141252798 141252820 -61832712 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 538 338 34 34 chr5 141254972 141255268 -61830264 - L3 LINE CR1 -91 1486 1191 222 309 81 54 chr5 141255406 141255555 -61829977 - L3 LINE CR1 -1122 455 303 198 0 0 0 chr5 141258464 141258486 -61827046 + (T)n Simple_repeat Simple_repeat 1 22 0 286 253 147 20 chr5 141258693 141258843 -61826689 - MIR SINE MIR 0 262 94 396 288 71 54 chr5 141260464 141260759 -61824773 - MLT1K LTR MaLR -149 439 140 1170 132 0 0 chr5 141260908 141261067 -61824465 + AluSg/x SINE Alu 135 293 -19 3725 20 0 0 chr5 141261071 141261530 -61824002 - L1PA2 LINE L1 -1458 4688 4230 7714 15 0 15 chr5 141261531 141263015 -61822517 + L1PA2 LINE L1 4685 6154 -1 24 32 0 0 chr5 141263015 141263046 -61822486 + AT_rich Low_complexity Low_complexity 1 31 0 2145 131 0 0 chr5 141263098 141263396 -61822136 + AluSx SINE Alu 1 298 -14 366 130 0 0 chr5 141264348 141264402 -61821130 + AluY SINE Alu 1 54 -246 534 188 14 62 chr5 141264891 141265035 -61820497 + L1MB5 LINE L1 6037 6173 -1 352 186 0 0 chr5 141266206 141266276 -61819256 - MLT1K LTR MaLR -1 587 518 2218 60 0 0 chr5 141266504 141266773 -61818759 + AluY SINE Alu 43 311 0 249 313 0 0 chr5 141266991 141267058 -61818474 - MLT1K LTR MaLR -373 215 149 2399 148 30 19 chr5 141268788 141269214 -61816318 + Tigger2a DNA MER2_type 1 431 -3 2265 109 0 3 chr5 141269446 141269750 -61815782 + AluSx SINE Alu 1 303 -9 2428 84 0 0 chr5 141270107 141270403 -61815129 - AluY SINE Alu -15 296 1 22 56 0 0 chr5 141270451 141270487 -61815045 + AT_rich Low_complexity Low_complexity 1 36 0 2089 133 3 0 chr5 141270534 141270834 -61814698 + AluSq SINE Alu 1 301 -12 2283 109 3 0 chr5 141271791 141272102 -61813430 - AluSx SINE Alu 0 312 1 23 0 0 0 chr5 141272273 141272296 -61813236 + AT_rich Low_complexity Low_complexity 1 23 0 1232 185 5 18 chr5 141272502 141272724 -61812808 + AluJb SINE Alu 11 229 -83 434 127 0 14 chr5 141272731 141272802 -61812730 + LTR8A LTR ERV1 302 371 -356 289 101 0 116 chr5 141272802 141272871 -61812661 + Alu SINE Alu 240 300 -2 664 326 73 58 chr5 141273277 141273458 -61812074 + L2 LINE L2 1201 1378 -1936 2170 101 0 7 chr5 141273458 141273754 -61811778 - AluSx SINE Alu -18 294 1 664 326 73 58 chr5 141273754 141274228 -61811304 + L2 LINE L2 1378 1866 -1448 220 282 64 91 chr5 141274301 141274411 -61811121 + L2 LINE L2 3136 3242 -30 21 36 0 0 chr5 141275166 141275194 -61810338 + AT_rich Low_complexity Low_complexity 1 28 0 358 256 12 0 chr5 141275485 141275567 -61809965 - MIR3 SINE MIR -13 195 113 454 278 195 15 chr5 141275617 141275822 -61809710 + MIR SINE MIR 21 262 0 2541 63 3 0 chr5 141276588 141276891 -61808641 - AluY SINE Alu -7 304 1 563 279 28 84 chr5 141277187 141277381 -61808151 + Charlie8 DNA MER1_type 3 177 -164 1213 111 11 16 chr5 141277381 141277571 -61807961 - L1PA11 LINE L1 0 6174 5986 563 279 28 84 chr5 141277571 141277663 -61807869 + Charlie8 DNA MER1_type 177 273 -68 205 262 16 16 chr5 141277727 141277788 -61807744 - MIR3 SINE MIR -49 159 99 2023 142 7 3 chr5 141277958 141278253 -61807279 + AluSx SINE Alu 1 296 -16 268 358 75 8 chr5 141278382 141278502 -61807030 - MER5A DNA MER1_type -3 186 59 765 153 0 8 chr5 141278561 141278685 -61806847 + FLAM_C SINE Alu 5 127 -16 2240 106 0 37 chr5 141278824 141279146 -61806386 - AluSp SINE Alu -3 310 1 2189 128 0 0 chr5 141280513 141280809 -61804723 - AluSq SINE Alu -17 296 1 21 0 0 0 chr5 141281962 141281983 -61803549 + AT_rich Low_complexity Low_complexity 1 21 0 220 229 271 42 chr5 141282473 141282569 -61802963 + MIR SINE MIR 16 133 -75 426 276 59 13 chr5 141282744 141282896 -61802636 - MLT1G1 LTR MaLR -434 161 3 26 0 0 0 chr5 141283942 141283968 -61801564 + AT_rich Low_complexity Low_complexity 1 26 0 2076 127 0 25 chr5 141284389 141284705 -61800827 + AluSx SINE Alu 1 308 -4 767 345 61 8 chr5 141285306 141285642 -61799890 - MLT1K LTR MaLR -2 586 216 2263 100 0 3 chr5 141285642 141285943 -61799589 - AluSq SINE Alu -13 300 1 767 345 61 8 chr5 141285943 141286084 -61799448 - MLT1K LTR MaLR -372 216 84 1895 189 73 27 chr5 141286311 141286788 -61798744 + MLT1D LTR MaLR 7 505 0 2295 105 3 0 chr5 141286896 141287202 -61798330 - AluSx SINE Alu -5 307 1 422 294 20 72 chr5 141287249 141287596 -61797936 + MLT1I LTR MaLR 73 401 -8 239 373 39 10 chr5 141288185 141288287 -61797245 - MIR3 SINE MIR -15 193 89 3532 152 27 66 chr5 141288408 141288904 -61796628 - L1MB3 LINE L1 -1 6182 5727 2008 147 0 13 chr5 141288904 141289211 -61796321 + AluJb SINE Alu 1 303 -9 3532 152 27 66 chr5 141289211 141289502 -61796030 - L1MB3 LINE L1 -456 5727 5426 22 0 0 0 chr5 141291073 141291095 -61794437 + AT_rich Low_complexity Low_complexity 1 22 0 281 321 73 44 chr5 141293582 141293719 -61791813 - L2 LINE L2 -10 3262 3122 1067 158 0 23 chr5 141294100 141294277 -61791255 - FRAM SINE Alu -8 168 1 2038 120 0 33 chr5 141294330 141294630 -61790902 - AluSg SINE Alu -20 290 1 189 0 0 0 chr5 141294820 141294841 -61790691 + (A)n Simple_repeat Simple_repeat 1 21 0 191 351 27 14 chr5 141295490 141295564 -61789968 + MIR SINE MIR 28 102 -106 184 286 0 0 chr5 141295576 141295625 -61789907 - MIR SINE MIR -108 154 106 457 224 333 0 chr5 141296696 141296888 -61788644 - MER46C DNA MER2_type -3 335 80 231 245 213 0 chr5 141296891 141296985 -61788547 - MER46C DNA MER2_type -224 114 1 657 242 24 24 chr5 141297101 141297312 -61788220 - MIR SINE MIR 0 262 52 1552 147 12 0 chr5 141297455 141297714 -61787818 - Tigger1 DNA MER2_type 0 2418 2157 1228 86 59 72 chr5 141297714 141297784 -61787748 - MER30 DNA MER1_type -10 220 151 2186 91 7 7 chr5 141297784 141298080 -61787452 - AluSc SINE Alu -12 297 2 1228 86 59 72 chr5 141298080 141298231 -61787301 - MER30 DNA MER1_type -79 151 2 12776 134 17 14 chr5 141298232 141300260 -61785272 - Tigger1 DNA MER2_type -254 2164 127 1916 159 17 0 chr5 141300260 141300561 -61784971 + AluJb SINE Alu 3 308 -4 12776 134 17 14 chr5 141300561 141300687 -61784845 - Tigger1 DNA MER2_type -2291 127 3 297 276 102 0 chr5 141300840 141300938 -61784594 + L2 LINE L2 3203 3310 -3 351 214 0 41 chr5 141301186 141301331 -61784201 + (TATG)n Simple_repeat Simple_repeat 4 142 0 * 888 178 0 0 chr5 141301324 141301504 -61784028 + (TG)n Simple_repeat Simple_repeat 1 180 0 227 219 0 16 chr5 141302190 141302254 -61783278 + CT-rich Low_complexity Low_complexity 2 64 0 218 137 0 39 chr5 141302726 141302777 -61782755 + (CAT)n Simple_repeat Simple_repeat 3 51 0 2194 96 10 16 chr5 141302807 141303110 -61782422 - AluSq SINE Alu -12 301 1 1523 157 94 0 chr5 141303178 141303433 -61782099 + AluJb SINE Alu 1 279 -33 629 127 52 35 chr5 141303434 141303607 -61781925 + GA-rich Low_complexity Low_complexity 1 176 0 195 145 81 0 chr5 141303624 141303686 -61781846 + GA-rich Low_complexity Low_complexity 4 70 0 283 282 100 18 chr5 141303989 141304099 -61781433 - MIR3 SINE MIR -1 207 89 22 0 0 0 chr5 141304251 141304273 -61781259 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 141304743 141304772 -61780760 + AT_rich Low_complexity Low_complexity 1 29 0 1842 154 0 29 chr5 141304856 141305162 -61780370 + AluJb SINE Alu 1 297 -15 286 323 111 9 chr5 141305372 141305598 -61779934 + MLT1K LTR MaLR 340 588 0 336 246 79 87 chr5 141305637 141305777 -61779755 + MLT1L LTR MaLR 1 140 -475 2466 63 0 0 chr5 141305777 141306076 -61779456 - AluY SINE Alu -12 299 1 336 246 79 87 chr5 141306076 141306187 -61779345 + MLT1L LTR MaLR 140 250 -365 249 327 73 0 chr5 141306341 141306451 -61779081 + MLT1L LTR MaLR 476 593 -22 2512 127 21 7 chr5 141308294 141308719 -61776813 - MER57B LTR ERV1 -3 431 1 926 316 143 25 chr5 141309018 141309525 -61776007 - L2 LINE L2 -913 2401 1775 2069 148 3 3 chr5 141309525 141309864 -61775668 + MER44D DNA MER2_type 1 609 0 926 316 143 25 chr5 141309864 141310109 -61775423 - L2 LINE L2 -1539 1775 1560 2002 169 62 84 chr5 141310257 141310334 -61775198 - MLT1D LTR MaLR -2 503 426 1981 112 77 0 chr5 141310334 141310619 -61774913 - AluSq SINE Alu -6 307 1 2002 169 62 84 chr5 141310619 141311055 -61774477 - MLT1D LTR MaLR -79 426 1 2247 105 0 3 chr5 141311167 141311462 -61774070 - AluSg SINE Alu -14 296 3 1992 142 3 3 chr5 141312321 141312603 -61772929 + AluSx SINE Alu 1 282 -30 435 52 0 0 chr5 141312603 141312661 -61772871 + (CTAAA)n Simple_repeat Simple_repeat 3 60 0 313 327 17 11 chr5 141314024 141314158 -61771374 + MER5B DNA MER1_type 12 156 -33 2305 73 3 20 chr5 141314269 141314570 -61770962 + AluSc SINE Alu 1 296 -13 2226 108 3 0 chr5 141314615 141314903 -61770629 - AluSp SINE Alu -24 289 1 987 256 61 74 chr5 141315074 141315788 -61769744 - L2 LINE L2 0 3313 2600 1596 199 22 0 chr5 141316062 141316374 -61769158 + MLT1A1 LTR MaLR 1 319 -46 2413 94 3 0 chr5 141318222 141318530 -61767002 + AluSp SINE Alu 1 309 -4 213 328 16 0 chr5 141318537 141318598 -61766934 + L3 LINE CR1 1484 1545 -32 1391 217 61 22 chr5 141319698 141320058 -61765474 + MLT1A2 LTR MaLR 1 374 0 1233 178 40 31 chr5 141320906 141321227 -61764305 - MER33 DNA MER1_type 0 324 1 2300 109 3 0 chr5 141321509 141321811 -61763721 - AluSx SINE Alu -5 307 5 252 0 0 0 chr5 141322839 141322867 -61762665 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2320 61 0 0 chr5 141322869 141323147 -61762385 - AluY SINE Alu -33 278 1 210 304 38 38 chr5 141325144 141325223 -61760309 - MER5A DNA MER1_type -98 91 13 1741 171 3 3 chr5 141326555 141326842 -61758690 - AluJo SINE Alu -25 287 1 216 0 0 0 chr5 141328089 141328113 -61757419 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6392 147 7 29 chr5 141328163 141328708 -61756824 - L1PA15 LINE L1 -147 6018 5463 2296 77 23 19 chr5 141328708 141329018 -61756514 - AluY SINE Alu 0 311 1 6392 147 7 29 chr5 141329018 141330515 -61755017 - L1PA15 LINE L1 -702 5463 4026 208 109 22 22 chr5 141331426 141331472 -61754060 + T-rich Low_complexity Low_complexity 2 47 0 1671 191 0 3 chr5 141332343 141332676 -61752856 - AluJo SINE Alu 0 334 3 216 0 0 0 chr5 141334026 141334050 -61751482 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1414 167 36 0 chr5 141334709 141334930 -61750602 + AluJb SINE Alu 1 229 -83 1657 179 7 26 chr5 141334983 141335285 -61750247 - AluJb SINE Alu -16 296 1 3473 232 40 28 chr5 141335287 141336064 -61749468 + L1MDa LINE L1 2304 3070 -3470 2247 103 3 3 chr5 141336064 141336365 -61749167 - AluSc SINE Alu -8 301 1 3473 232 40 28 chr5 141336365 141337128 -61748404 + L1MDa LINE L1 3070 3874 -2666 444 19 0 0 chr5 141337172 141337225 -61748307 + (TA)n Simple_repeat Simple_repeat 2 54 0 1539 198 94 15 chr5 141337232 141337571 -61747961 - MLT2D LTR ERVL -48 366 1 2568 233 69 42 chr5 141337571 141338195 -61747337 + L1MDa LINE L1 4005 4670 -1870 221 0 0 33 chr5 141338195 141338225 -61747307 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2568 233 69 42 chr5 141338225 141338658 -61746874 + L1MDa LINE L1 4670 5090 -1450 548 196 33 49 chr5 141338655 141338973 -61746559 + L1ME2 LINE L1 1298 1697 -4729 * 1077 171 109 34 chr5 141338944 141339047 -61746485 + L1MD1 LINE L1 6208 6302 -220 2099 124 14 0 chr5 141339047 141339337 -61746195 + AluSg SINE Alu 1 294 -16 1077 171 109 34 chr5 141339337 141339526 -61746006 + L1MD1 LINE L1 6302 6522 0 201 289 0 53 chr5 141342882 141342958 -61742574 + MIR SINE MIR 52 123 -139 381 43 0 0 chr5 141343199 141343246 -61742286 + (CA)n Simple_repeat Simple_repeat 2 48 0 328 270 90 0 chr5 141343740 141343840 -61741692 + MIR SINE MIR 154 262 0 823 241 49 88 chr5 141343976 141344337 -61741195 - LTR16A1 LTR ERVL 0 457 83 1026 249 78 36 chr5 141344337 141344695 -61740837 - MLT1A2 LTR MaLR 0 374 2 823 241 49 88 chr5 141344695 141344762 -61740770 - LTR16A1 LTR ERVL -374 83 45 1138 244 150 52 chr5 141344762 141345262 -61740270 + MLT1H LTR MaLR 1 549 0 823 241 49 88 chr5 141345262 141345285 -61740247 - LTR16A1 LTR ERVL -412 45 23 305 290 98 33 chr5 141345592 141345775 -61739757 + MIR SINE MIR 21 215 -47 2230 94 0 13 chr5 141346815 141347113 -61738419 - AluSx SINE Alu -18 294 1 456 294 108 25 chr5 141347519 141347999 -61737533 + HAL1 LINE L1 1115 1634 -873 498 136 0 0 chr5 141348065 141348146 -61737386 + (TA)n Simple_repeat Simple_repeat 1 81 0 414 316 80 57 chr5 141348147 141348503 -61737029 + L1ME2 LINE L1 2916 3271 -3155 4015 155 59 25 chr5 141348503 141349302 -61736230 - LTR1B LTR ERV1 0 826 1 414 316 80 57 chr5 141349302 141349367 -61736165 + L1ME2 LINE L1 3271 3333 -3093 339 121 0 15 chr5 141349374 141349440 -61736092 + LTR8A LTR ERV1 1 65 -662 2321 191 40 17 chr5 141349442 141349967 -61735565 + LTR8A LTR ERV1 191 727 0 367 229 18 84 chr5 141349978 141350144 -61735388 + L1ME2 LINE L1 3386 3540 -2886 371 311 106 37 chr5 141350168 141350652 -61734880 - L2 LINE L2 -489 2825 2226 430 216 0 41 chr5 141351609 141351706 -61733826 - MER81 DNA DNA -2 112 20 375 298 0 0 chr5 141351722 141351806 -61733726 + MIR3 SINE MIR 111 194 -14 2672 223 40 59 chr5 141355046 141355169 -61730363 + L1ME2 LINE L1 5477 5601 -843 1408 176 56 23 chr5 141355169 141355471 -61730061 - AluJo SINE Alu 0 312 1 2672 223 40 59 chr5 141355471 141355657 -61729875 + L1ME2 LINE L1 5601 5789 -655 4250 132 29 23 chr5 141355657 141356410 -61729122 + L1MA7 LINE L1 5534 6291 0 2672 223 40 59 chr5 141356410 141357067 -61728465 + L1ME2 LINE L1 5789 6432 -12 2152 76 20 30 chr5 141357069 141357370 -61728162 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 141357378 141357399 -61728133 + AT_rich Low_complexity Low_complexity 1 21 0 239 348 54 18 chr5 141357710 141357822 -61727710 + L2 LINE L2 3156 3271 -1 1312 161 11 11 chr5 141358133 141358407 -61727125 - L1MA6 LINE L1 -1 6299 6026 1140 160 5 0 chr5 141358419 141358625 -61726907 + L1MA6 LINE L1 5845 6051 -249 2498 104 2 48 chr5 141358825 141359220 -61726312 - MER51B LTR ERV1 0 377 1 467 208 8 0 chr5 141360019 141360139 -61725393 + CT-rich Low_complexity Low_complexity 4 124 0 528 241 43 28 chr5 141360886 141361027 -61724505 - MIR SINE MIR -15 247 105 458 233 87 0 chr5 141361373 141361476 -61724056 - L2 LINE L2 -6 3307 3196 292 256 37 12 chr5 141361496 141361578 -61723954 + MIR SINE MIR 114 197 -65 193 200 60 0 chr5 141364225 141364275 -61721257 - MIR SINE MIR -72 190 138 286 286 26 65 chr5 141365210 141365364 -61720168 - MIR SINE MIR -50 212 65 864 245 163 31 chr5 141365442 141365925 -61719607 - MLT1G LTR MaLR -73 517 2 303 304 67 71 chr5 141366031 141366075 -61719457 + L1MC/D LINE L1 4330 4373 -1773 1788 164 3 26 chr5 141366075 141366380 -61719152 + AluJb SINE Alu 3 300 -12 303 304 67 71 chr5 141366380 141366785 -61718747 + L1MC/D LINE L1 4373 4777 -1369 403 172 121 0 chr5 141366801 141366900 -61718632 - MER94 DNA DNA -23 111 1 456 51 0 0 chr5 141367011 141367070 -61718462 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 244 286 13 0 chr5 141367072 141367149 -61718383 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 638 320 121 57 chr5 141367261 141367786 -61717746 - L2 LINE L2 -263 3050 2500 27 29 0 0 chr5 141367912 141367946 -61717586 + AT_rich Low_complexity Low_complexity 1 34 0 235 255 39 0 chr5 141367979 141368081 -61717451 + L1MC/D LINE L1 5292 5397 -2411 33 43 0 0 chr5 141368154 141368201 -61717331 + AT_rich Low_complexity Low_complexity 1 47 0 1944 163 0 0 chr5 141368325 141368626 -61716906 - AluSx SINE Alu -7 305 5 247 272 19 19 chr5 141368629 141368732 -61716800 + L1MC/D LINE L1 5648 5750 -2058 397 222 183 13 chr5 141369820 141369973 -61715559 - MIR SINE MIR -9 253 75 216 0 0 0 chr5 141370303 141370327 -61715205 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 13862 86 4 7 chr5 141371178 141373884 -61711648 - L1PA7 LINE L1 0 6154 3441 328 21 21 0 chr5 141373884 141373931 -61711601 + L1PA7 LINE L1 3365 3412 -2734 222 316 38 13 chr5 141374038 141374117 -61711415 + L2 LINE L2 3227 3307 -6 336 24 0 0 chr5 141375039 141375080 -61710452 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 182 23 0 chr5 141377027 141377071 -61708461 - L2 LINE L2 -1 3312 3268 353 251 92 75 chr5 141377812 141378051 -61707481 + MLT1K LTR MaLR 317 559 -29 211 307 99 0 chr5 141378324 141378425 -61707107 + MIR SINE MIR 34 144 -118 21 0 0 0 chr5 141378548 141378569 -61706963 + AT_rich Low_complexity Low_complexity 1 21 0 667 247 44 12 chr5 141378573 141378824 -61706708 - MIR SINE MIR 0 262 4 26 30 0 0 chr5 141380744 141380777 -61704755 + AT_rich Low_complexity Low_complexity 1 33 0 1267 221 57 83 chr5 141380881 141381338 -61704194 + MLT1F LTR MaLR 5 449 -93 350 193 205 0 chr5 141381631 141381714 -61703818 - L2 LINE L2 -1 3312 3213 426 39 0 0 chr5 141383615 141383667 -61701865 + (TA)n Simple_repeat Simple_repeat 2 53 0 2271 101 7 0 chr5 141386494 141386790 -61698742 - AluSx SINE Alu -14 298 1 190 399 56 14 chr5 141387280 141387423 -61698109 + L2 LINE L2 2560 2708 -606 363 343 0 0 chr5 141387612 141387720 -61697812 + MIR SINE MIR 42 149 -113 966 222 5 0 chr5 141387850 141388035 -61697497 + MER5A DNA MER1_type 1 186 -3 1924 157 0 20 chr5 141388064 141388476 -61697056 - AluSx SINE Alu 0 406 1 224 200 0 40 chr5 141389345 141389395 -61696137 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 1472 167 51 16 chr5 141390394 141390706 -61694826 + L1MB4 LINE L1 5845 6167 -13 248 219 0 0 chr5 141390706 141390770 -61694762 + L1MB3 LINE L1 6120 6183 0 2133 123 0 0 chr5 141391258 141391558 -61693974 + AluSx SINE Alu 1 300 -12 824 164 19 25 chr5 141391807 141391966 -61693566 + MER5A DNA MER1_type 32 189 0 180 0 0 0 chr5 141392639 141392659 -61692873 + (TA)n Simple_repeat Simple_repeat 2 21 0 440 288 59 56 chr5 141393799 141394105 -61691427 - MLT1I LTR MaLR -35 374 68 384 327 47 0 chr5 141394162 141394312 -61691220 - MIR SINE MIR -11 251 95 907 192 228 38 chr5 141394771 141395162 -61690370 + MER69 DNA AcHobo 2062 2526 0 343 102 34 0 chr5 141395223 141395282 -61690250 - L1PA10 LINE L1 -3 6165 6105 24 53 0 0 chr5 141395486 141395524 -61690008 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 141396543 141396565 -61688967 + (A)n Simple_repeat Simple_repeat 1 22 0 417 287 105 42 chr5 141396613 141396756 -61688776 - MIR3 SINE MIR -23 185 34 224 300 55 55 chr5 141397985 141398095 -61687437 - L2 LINE L2 -18 3254 3145 225 286 0 0 chr5 141398117 141398173 -61687359 + MIR SINE MIR 163 218 -44 243 309 12 0 chr5 141398942 141399026 -61686506 - MER117 DNA MER1_type -34 163 79 253 238 149 66 chr5 141399477 141399658 -61685874 + LTR67 LTR ERVL 356 551 -6 226 383 93 40 chr5 141399933 141400385 -61685147 + L2 LINE L2 2421 2896 -418 215 213 120 13 chr5 141403161 141403236 -61682296 + MIR SINE MIR 66 148 -60 981 207 22 9 chr5 141403466 141403698 -61681834 + L1MB8 LINE L1 5944 6178 0 225 304 0 25 chr5 141403778 141403857 -61681675 + Charlie4 DNA MER1_type 1884 1960 -1 32 26 0 0 chr5 141404078 141404117 -61681415 + AT_rich Low_complexity Low_complexity 1 39 0 334 277 127 12 chr5 141404606 141404772 -61680760 + L1MC4a LINE L1 5709 5893 -1915 28 61 0 0 chr5 141404947 141404996 -61680536 + AT_rich Low_complexity Low_complexity 1 49 0 320 333 9 35 chr5 141405073 141405187 -61680345 - MIR SINE MIR -63 145 35 221 172 47 47 chr5 141405652 141405716 -61679816 + (CAAT)n Simple_repeat Simple_repeat 2 65 0 563 309 64 5 chr5 141405943 141406131 -61679401 + MIR SINE MIR 13 211 -51 208 231 77 22 chr5 141406235 141406326 -61679206 + L2 LINE L2 25 120 -3194 26 0 0 0 chr5 141406710 141406736 -61678796 + AT_rich Low_complexity Low_complexity 1 26 0 300 189 0 147 chr5 141407058 141407153 -61678379 - MIR3 SINE MIR -27 181 101 459 350 67 24 chr5 141407266 141407595 -61677937 + MLT1L LTR MaLR 142 484 -131 331 221 0 0 chr5 141407615 141407692 -61677840 + L1MB8 LINE L1 6091 6167 -11 22 0 0 0 chr5 141408355 141408377 -61677155 + AT_rich Low_complexity Low_complexity 1 22 0 838 137 37 53 chr5 141410282 141410472 -61675060 + MER53 DNA DNA 1 187 -2 21 36 0 0 chr5 141410619 141410647 -61674885 + AT_rich Low_complexity Low_complexity 1 28 0 7553 26 0 3 chr5 141410919 141412345 -61673187 - L1PA4 LINE L1 -1 6154 4733 569 179 9 9 chr5 141412555 141412661 -61672871 + MLT1D LTR MaLR 1 106 -399 644 197 0 0 chr5 141412661 141412778 -61672754 + FLAM_C SINE Alu 1 117 -26 32 0 0 0 chr5 141412781 141412813 -61672719 + AT_rich Low_complexity Low_complexity 1 32 0 1490 172 73 85 chr5 141412813 141412998 -61672534 + MLT1D LTR MaLR 97 283 -222 2300 119 16 26 chr5 141412998 141413377 -61672155 + THE1C LTR MaLR 1 375 0 1490 172 73 85 chr5 141413377 141413603 -61671929 + MLT1D LTR MaLR 283 503 -2 1574 151 68 62 chr5 141413807 141414115 -61671417 + L1M2 LINE L1 4927 5234 -979 2266 90 10 3 chr5 141414115 141414416 -61671116 + AluY SINE Alu 1 303 -8 1574 151 68 62 chr5 141414416 141414655 -61670877 + L1M2 LINE L1 5234 5470 -743 820 144 62 7 chr5 141414655 141414801 -61670731 + FRAM SINE Alu 1 40 0 180 324 15 29 chr5 141414828 141414896 -61670636 - L3 LINE CR1 -27 1550 1484 6802 67 16 0 chr5 141415355 141416516 -61669016 + L1PA14 LINE L1 4319 5509 -652 192 40 0 0 chr5 141416516 141416541 -61668991 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6802 67 16 0 chr5 141416541 141417205 -61668327 + L1PA14 LINE L1 5509 6161 0 249 340 46 20 chr5 141418948 141419101 -61666431 - MIR3 SINE MIR -42 166 10 212 283 30 81 chr5 141420186 141420285 -61665247 - L3b LINE CR1 -202 1381 1288 667 283 11 5 chr5 141420597 141420784 -61664748 - MLT1J LTR MaLR -323 188 1 21 57 0 0 chr5 141421464 141421499 -61664033 + AT_rich Low_complexity Low_complexity 1 35 0 2428 79 0 19 chr5 141421940 141422255 -61663277 + AluY SINE Alu 1 309 -2 707 318 21 4 chr5 141422465 141422701 -61662831 - MIR SINE MIR -3 259 20 1772 153 36 4 chr5 141423055 141423336 -61662196 + AluJb SINE Alu 1 290 -22 802 270 111 36 chr5 141423454 141423929 -61661603 + MLT1H LTR MaLR 7 549 0 265 189 40 14 chr5 141424017 141424091 -61661441 + MLT1L LTR MaLR 536 611 -4 1857 66 0 66 chr5 141424274 141424532 -61661000 - AluY SINE Alu -15 296 56 248 279 57 19 chr5 141425478 141425636 -61659896 + L1ME4a LINE L1 5947 6110 -11 304 161 0 0 chr5 141426240 141426296 -61659236 + L1MB8 LINE L1 6117 6172 -6 36707 92 15 7 chr5 141426328 141432414 -61653118 + L1PA6 LINE L1 11 6146 -8 31 26 0 0 chr5 141432415 141432453 -61653079 + AT_rich Low_complexity Low_complexity 1 38 0 180 100 0 0 chr5 141432512 141432542 -61652990 + L2 LINE L2 3284 3313 0 1103 218 27 26 chr5 141432735 141433231 -61652301 + MLT1F LTR MaLR 1 567 0 1206 29 0 0 chr5 141433655 141433795 -61651737 + L1PA5 LINE L1 6006 6145 -9 306 292 281 5 chr5 141434565 141434757 -61650775 + L1ME4a LINE L1 5647 5891 -230 2149 109 53 6 chr5 141435614 141435934 -61649598 - MER1B DNA MER1_type 0 337 3 1416 184 12 31 chr5 141436880 141437136 -61648396 + AluJb SINE Alu 1 251 -61 2359 84 3 3 chr5 141437339 141437649 -61647883 - AluY SINE Alu -1 310 1 374 360 55 29 chr5 141437778 141438089 -61647443 - LTR16C LTR ERVL -32 459 141 1509 166 56 124 chr5 141438964 141439465 -61646067 - L1MB3 LINE L1 -2 6181 5715 180 0 0 0 chr5 141439746 141439766 -61645766 + (T)n Simple_repeat Simple_repeat 1 20 0 280 318 47 68 chr5 141440071 141440219 -61645313 + MER5A DNA MER1_type 26 170 -19 1983 81 0 0 chr5 141441032 141441280 -61644252 - AluY SINE Alu -21 290 43 352 186 0 0 chr5 141441508 141441578 -61643954 + MLT1K LTR MaLR 518 587 -1 332 274 0 34 chr5 141442663 141442838 -61642694 + A-rich Low_complexity Low_complexity 5 173 0 2203 129 0 0 chr5 141443055 141443364 -61642168 - AluSq SINE Alu -4 309 1 315 364 12 6 chr5 141443433 141443598 -61641934 + L2 LINE L2 2445 2610 -704 189 319 29 51 chr5 141443795 141443933 -61641599 + L2 LINE L2 2917 3051 -221 1544 103 5 19 chr5 141444202 141444460 -61641072 + AluSg/x SINE Alu 70 324 0 1586 105 0 5 chr5 141444460 141444669 -61640863 - AluSq SINE Alu -83 230 23 763 276 11 62 chr5 141445090 141445365 -61640167 + MIR SINE MIR 2 262 0 2132 137 0 7 chr5 141445541 141445847 -61639685 + AluSx SINE Alu 1 304 -8 400 381 57 0 chr5 141446773 141446949 -61638583 + MER91A DNA MER1_type 2 187 -9 212 274 20 0 chr5 141446969 141447020 -61638512 + MER91A DNA MER1_type 134 185 -5 2154 115 0 0 chr5 141447277 141447565 -61637967 + AluSx SINE Alu 1 288 -24 3725 20 0 0 chr5 141447574 141448033 -61637499 - L1PA2 LINE L1 -1458 4688 4230 7711 14 0 15 chr5 141448034 141449514 -61636018 + L1PA2 LINE L1 4685 6150 -5 251 223 29 107 chr5 141502102 141502205 -61583327 + MLT1H LTR MaLR 454 548 -1 251 313 0 45 chr5 141502567 141502634 -61582898 + L2 LINE L2 3129 3192 -80 24 0 0 0 chr5 141502823 141502847 -61582685 + AT_rich Low_complexity Low_complexity 1 24 0 1539 141 74 39 chr5 141502898 141503181 -61582351 + AluJo SINE Alu 1 293 -19 4272 148 30 28 chr5 141504134 141504898 -61580634 - L1MC1 LINE L1 0 6333 5568 369 0 0 0 chr5 141505196 141505237 -61580295 + (CA)n Simple_repeat Simple_repeat 1 41 0 385 175 0 103 chr5 141505620 141505717 -61579815 - MLT1F LTR MaLR -435 107 21 365 282 62 70 chr5 141505844 141506117 -61579415 - L2 LINE L2 -87 3226 2956 463 282 79 27 chr5 141506820 141507038 -61578494 - MIR SINE MIR -27 235 3 1313 229 31 37 chr5 141507074 141507397 -61578135 + MER46C DNA MER2_type 1 321 -17 18511 72 10 17 chr5 141507766 141510909 -61574623 - L1PA7 LINE L1 -207 5947 2833 423 91 0 0 chr5 141510909 141510975 -61574557 - Alu SINE Alu 0 310 245 588 293 113 20 chr5 141511435 141511885 -61573647 - LTR33 LTR ERVL 0 521 1 435 281 43 24 chr5 141511908 141512072 -61573460 + MIR SINE MIR 2 168 -94 1668 100 0 0 chr5 141512091 141512311 -61573221 + AluSq SINE Alu 1 220 -93 474 103 0 0 chr5 141516296 141516354 -61569178 - AluJ/FLAM SINE Alu -249 63 6 2717 136 18 18 chr5 141516378 141516828 -61568704 + L1M3 LINE L1 5320 5769 -414 2244 113 0 0 chr5 141516828 141517129 -61568403 + AluSg SINE Alu 1 301 -9 899 179 19 12 chr5 141517138 141517300 -61568232 + FRAM SINE Alu 2 164 -2 241 308 0 0 chr5 141517302 141517367 -61568165 + MIR SINE MIR 177 241 -21 23 0 0 0 chr5 141518986 141519009 -61566523 + GC_rich Low_complexity Low_complexity 1 23 0 877 114 8 0 chr5 141519157 141519280 -61566252 + AluSg/x SINE Alu 177 300 -12 511 305 86 10 chr5 141519313 141519510 -61566022 - MIR SINE MIR -50 212 1 330 280 27 60 chr5 141519728 141519878 -61565654 + MIR SINE MIR 118 262 0 414 249 141 32 chr5 141520507 141520692 -61564840 - MIR SINE MIR -12 250 46 4920 69 71 8 chr5 141521213 141521948 -61563584 + L1PA7 LINE L1 5369 6149 -5 331 221 66 55 chr5 141523684 141523865 -61561667 - L1M4 LINE L1 -3727 2419 2237 376 198 36 0 chr5 141523892 141524153 -61561379 + (TA)n Simple_repeat Simple_repeat 1 270 0 1515 152 7 94 chr5 141524369 141524678 -61560854 - AluJo SINE Alu -30 282 1 858 154 0 0 chr5 141525375 141525498 -61560034 - FLAM_C SINE Alu -20 123 1 757 120 45 0 chr5 141526412 141526545 -61558987 - L1MA5 LINE L1 -3 6297 6159 1448 102 122 0 chr5 141527496 141527701 -61557831 - MER30 DNA MER1_type 0 230 1 1708 187 0 10 chr5 141527778 141528067 -61557465 + AluJo SINE Alu 2 287 -25 410 233 60 53 chr5 141528178 141528355 -61557177 + MIR SINE MIR 36 212 -50 2262 131 26 17 chr5 141528436 141528788 -61556744 + THE1A LTR MaLR 1 355 0 3455 213 45 22 chr5 141528810 141529676 -61555856 + L1MB8 LINE L1 4253 5138 -1008 3304 194 58 37 chr5 141529703 141530543 -61554989 + L1MB8 LINE L1 5319 6176 -2 1087 208 30 117 chr5 141530687 141531081 -61554451 - MLT1A2 LTR MaLR -11 363 4 1929 156 34 57 chr5 141531488 141531872 -61553660 - THE1C LTR MaLR 0 375 1 183 234 128 0 chr5 141531957 141532004 -61553528 - MIR3 SINE MIR -24 184 132 233 293 104 9 chr5 141532102 141532208 -61553324 + MIR SINE MIR 71 186 -76 631 238 194 53 chr5 141532376 141532695 -61552837 + MLT1A1 LTR MaLR 1 364 -1 267 281 126 50 chr5 141532724 141532923 -61552609 + MIR SINE MIR 20 233 -29 206 140 0 40 chr5 141533529 141533579 -61551953 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 230 321 12 0 chr5 141534517 141534601 -61550931 - L2 LINE L2 -212 3060 2976 21 36 0 0 chr5 141534730 141534758 -61550774 + AT_rich Low_complexity Low_complexity 1 28 0 296 263 10 30 chr5 141535157 141535256 -61550276 - L2 LINE L2 -170 3102 3006 5247 151 26 17 chr5 141535258 141535996 -61549536 + MER54A LTR ERVL 1 750 -151 2295 113 33 28 chr5 141535996 141536358 -61549174 - THE1B LTR MaLR 0 364 1 5247 151 26 17 chr5 141536358 141536512 -61549020 + MER54A LTR ERVL 750 901 0 275 332 217 16 chr5 141536529 141536833 -61548699 - L2 LINE L2 -351 2963 2599 216 345 60 0 chr5 141537409 141537525 -61548007 - MIR SINE MIR -56 206 84 498 276 158 31 chr5 141538386 141538582 -61546950 - MIR SINE MIR -30 232 12 1352 181 114 47 chr5 141539008 141539395 -61546137 - Charlie1b DNA MER1_type -110 413 1 636 195 150 84 chr5 141539396 141539729 -61545803 + LTR37B LTR ERV1 114 468 0 1274 73 12 0 chr5 141540185 141540372 -61545160 + AluY SINE Alu 119 307 0 329 231 250 10 chr5 141541186 141541394 -61544138 + MIR SINE MIR 2 259 -3 1320 184 74 4 chr5 141541636 141541907 -61543625 - AluJo SINE Alu -22 290 1 342 172 0 0 chr5 141542535 141542593 -61542939 + MER5A DNA MER1_type 132 189 0 212 371 38 0 chr5 141544524 141544629 -61540903 + MIR SINE MIR 33 141 -67 23 0 0 0 chr5 141545997 141546020 -61539512 + AT_rich Low_complexity Low_complexity 1 23 0 2261 103 0 0 chr5 141546161 141546463 -61539069 + AluSc SINE Alu 1 302 -7 188 234 0 16 chr5 141546725 141546789 -61538743 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 22 35 0 0 chr5 141547408 141547437 -61538095 + AT_rich Low_complexity Low_complexity 1 29 0 180 111 0 0 chr5 141548264 141548291 -61537241 + (A)n Simple_repeat Simple_repeat 1 27 0 1617 145 45 58 chr5 141548424 141548688 -61536844 - MER7A DNA MER2_type -2692 346 87 648 163 0 89 chr5 141548688 141548823 -61536709 - FLAM_A SINE Alu -10 123 1 1617 145 45 58 chr5 141548823 141548868 -61536664 - MER7A DNA MER2_type -2951 87 43 22 0 0 0 chr5 141550089 141550111 -61535421 + AT_rich Low_complexity Low_complexity 1 22 0 1214 179 34 26 chr5 141550605 141550839 -61534693 + MER46A DNA MER2_type 1 236 0 348 251 17 91 chr5 141550857 141551032 -61534500 + L2 LINE L2 2614 2775 -539 2907 237 86 48 chr5 141554124 141554483 -61531049 + L1MC4 LINE L1 6441 6785 -1257 2471 74 0 3 chr5 141554483 141554795 -61530737 + AluY SINE Alu 1 311 0 2907 237 86 48 chr5 141554795 141554918 -61530614 + L1MC4 LINE L1 6785 6902 -1140 1792 188 74 27 chr5 141554918 141555323 -61530209 + MSTA LTR MaLR 5 428 0 2907 237 86 48 chr5 141555323 141556047 -61529485 + L1MC4 LINE L1 6902 8036 -6 22 0 0 0 chr5 141557327 141557349 -61528183 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 141557686 141557711 -61527821 + AT_rich Low_complexity Low_complexity 1 25 0 278 268 0 0 chr5 141558191 141558273 -61527259 + (TA)n Simple_repeat Simple_repeat 2 83 0 265 335 98 26 chr5 141558384 141558578 -61526954 + MIR SINE MIR 28 235 -27 24 53 0 0 chr5 141559993 141560031 -61525501 + AT_rich Low_complexity Low_complexity 1 38 0 773 140 108 86 chr5 141560418 141560604 -61524928 + MER46A DNA MER2_type 47 236 0 430 299 90 33 chr5 141561009 141561220 -61524312 - MIR SINE MIR -29 233 11 1741 148 54 3 chr5 141561776 141562073 -61523459 - AluSx SINE Alu 0 312 1 1399 213 138 17 chr5 141562148 141562562 -61522970 + L1MD2 LINE L1 5895 6358 -1 209 204 0 0 chr5 141563088 141563137 -61522395 + A-rich Low_complexity Low_complexity 1 49 0 2189 104 0 0 chr5 141563635 141563924 -61521608 - AluSg SINE Alu -8 302 14 2432 139 152 26 chr5 141565850 141566318 -61519214 + MER1A DNA MER1_type 1 527 0 238 250 0 0 chr5 141566624 141566688 -61518844 + L1MC4 LINE L1 6640 6703 -1339 23 0 0 0 chr5 141567187 141567210 -61518322 + AT_rich Low_complexity Low_complexity 1 23 0 430 224 35 0 chr5 141567424 141567540 -61517992 - Charlie7 DNA MER1_type -495 2117 1998 873 154 6 63 chr5 141567540 141567715 -61517817 + MER2 DNA MER2_type 21 185 -160 21 36 0 0 chr5 141567717 141567745 -61517787 + AT_rich Low_complexity Low_complexity 1 28 0 352 239 42 0 chr5 141567757 141567828 -61517704 + MER2 DNA MER2_type 269 342 -3 279 153 208 0 chr5 141567837 141567909 -61517623 - Charlie7 DNA MER1_type -622 1990 1904 1685 179 159 5 chr5 141567917 141568257 -61517275 - L1MB4 LINE L1 -2 6178 5759 270 56 0 0 chr5 141568257 141568293 -61517239 + (CA)n Simple_repeat Simple_repeat 1 36 0 1685 179 159 5 chr5 141568293 141568372 -61517160 - L1MB4 LINE L1 -421 5759 5694 535 236 93 0 chr5 141568373 141568534 -61516998 - L1MB4 LINE L1 -1007 5139 4964 713 265 157 25 chr5 141568661 141569068 -61516464 - Charlie7 DNA MER1_type -778 1834 1374 353 192 13 13 chr5 141569337 141569415 -61516117 - Charlie7 DNA MER1_type -1570 1042 965 1852 164 20 0 chr5 141569610 141569909 -61515623 + AluJb SINE Alu 1 305 -7 822 200 56 6 chr5 141570487 141570667 -61514865 + MER5A DNA MER1_type 1 189 0 398 292 103 76 chr5 141571009 141571207 -61514325 - L1ME3 LINE L1 -248 5914 5723 2178 125 0 0 chr5 141571207 141571504 -61514028 - AluSx SINE Alu -15 297 1 398 292 103 76 chr5 141571504 141571692 -61513840 - L1ME3 LINE L1 -439 5723 5510 1460 102 65 0 chr5 141571692 141571908 -61513624 + MER30 DNA MER1_type 1 230 0 398 292 103 76 chr5 141571908 141572006 -61513526 - L1ME3 LINE L1 -652 5510 5416 427 291 153 21 chr5 141572219 141572597 -61512935 - L1ME3 LINE L1 -1058 5088 4661 237 162 0 0 chr5 141572765 141572802 -61512730 - tRNA-Lys-AAG tRNA tRNA -38 38 2 32 0 0 0 chr5 141573094 141573126 -61512406 + AT_rich Low_complexity Low_complexity 1 32 0 291 104 0 0 chr5 141573866 141573914 -61511618 + (CA)n Simple_repeat Simple_repeat 2 49 0 6686 59 51 0 chr5 141574365 141575532 -61510000 - L1PA7 LINE L1 -18 6136 4948 4951 102 3 11 chr5 141575831 141576553 -61508979 + L1PA15 LINE L1 5447 6162 -3 445 266 140 59 chr5 141577801 141578173 -61507359 + MLT1J LTR MaLR 102 503 -8 1354 314 106 18 chr5 141578323 141579028 -61506504 + HAL1 LINE L1 33 799 -1708 594 215 82 32 chr5 141579137 141579356 -61506176 + HAL1 LINE L1 1973 2202 -305 3534 188 44 16 chr5 141579443 141580132 -61505400 + MER44D DNA MER2_type 1 604 -1 1445 159 48 58 chr5 141580318 141580613 -61504919 - AluJo SINE Alu -16 296 5 183 42 0 0 chr5 141580666 141580690 -61504842 + (T)n Simple_repeat Simple_repeat 1 24 0 2299 94 0 0 chr5 141581175 141581474 -61504058 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 141583023 141583044 -61502488 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr5 141584097 141584143 -61501389 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr5 141584246 141584272 -61501260 + AT_rich Low_complexity Low_complexity 1 26 0 570 273 190 23 chr5 141585036 141585472 -61500060 - L1ME2 LINE L1 -202 5962 5454 21 36 0 0 chr5 141586621 141586649 -61498883 + AT_rich Low_complexity Low_complexity 1 28 0 194 152 0 22 chr5 141586870 141586916 -61498616 + (TA)n Simple_repeat Simple_repeat 2 46 0 364 227 10 21 chr5 141587323 141587420 -61498112 - L1MC5 LINE L1 -44 7917 7822 1005 241 97 50 chr5 141587430 141587933 -61497599 - L1MC5 LINE L1 -184 7777 7251 566 226 72 39 chr5 141587951 141588159 -61497373 + L1MC5 LINE L1 7675 7889 -72 752 256 123 42 chr5 141588245 141588699 -61496833 + L1MC4 LINE L1 7506 7996 -46 61 0 0 0 chr5 141590851 141590912 -61494620 + AT_rich Low_complexity Low_complexity 1 61 0 1212 198 39 109 chr5 141591594 141591818 -61493714 + L1M4 LINE L1 4399 4572 -1574 569 152 0 0 chr5 141591818 141591917 -61493615 + L1PB3 LINE L1 6054 6152 -2 1212 198 39 109 chr5 141591917 141592178 -61493354 + L1M4 LINE L1 4572 4850 -1296 1941 143 0 13 chr5 141592390 141592698 -61492834 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr5 141593017 141593046 -61492486 + AT_rich Low_complexity Low_complexity 1 29 0 380 229 38 70 chr5 141593486 141593643 -61491889 + L1MC5 LINE L1 7749 7900 -61 2292 106 0 0 chr5 141594498 141594809 -61490723 + AluSx SINE Alu 1 311 -1 217 315 27 27 chr5 141595233 141595306 -61490226 + MIR3 SINE MIR 111 183 -25 21 57 0 0 chr5 141595634 141595669 -61489863 + AT_rich Low_complexity Low_complexity 1 35 0 1681 196 0 3 chr5 141596563 141596869 -61488663 + AluJb SINE Alu 6 310 -2 435 352 91 84 chr5 141597106 141597765 -61487767 - L2 LINE L2 0 3272 2597 376 301 160 38 chr5 141597802 141598171 -61487361 - L2 LINE L2 -923 2391 1978 1005 251 67 12 chr5 141598262 141598592 -61486940 + L1MC4 LINE L1 7219 7566 -476 459 214 55 55 chr5 141599134 141599279 -61486253 + L2 LINE L2 3168 3312 -1 446 339 55 29 chr5 141602304 141602652 -61482880 + L2 LINE L2 2374 2730 -584 2140 113 3 0 chr5 141602772 141603074 -61482458 - AluSp SINE Alu -10 303 1 1782 93 0 45 chr5 141603078 141603346 -61482186 - AluY SINE Alu -14 297 42 482 56 0 0 chr5 141603346 141603417 -61482115 - Alu SINE Alu -239 71 1 346 287 133 7 chr5 141603422 141603572 -61481960 + L2 LINE L2 3143 3311 -2 1944 147 6 10 chr5 141604090 141604263 -61481269 - AluSx SINE Alu -1 311 138 1849 111 59 4 chr5 141604263 141604533 -61480999 - AluSc SINE Alu -8 301 17 1944 147 6 10 chr5 141604533 141604671 -61480861 - AluSx SINE Alu -174 138 1 189 291 68 10 chr5 141605529 141605632 -61479900 - MIR SINE MIR -44 218 110 488 258 18 17 chr5 141606098 141606222 -61479310 - MIR SINE MIR -62 146 38 22 0 0 0 chr5 141606303 141606325 -61479207 + AT_rich Low_complexity Low_complexity 1 22 0 3262 251 130 52 chr5 141606589 141607378 -61478154 + L1M4 LINE L1 2735 3461 -2702 2498 66 0 0 chr5 141607378 141607683 -61477849 + AluY SINE Alu 1 305 -6 3262 251 130 52 chr5 141607683 141607835 -61477697 + L1M4 LINE L1 3461 3600 -2563 240 35 0 0 chr5 141607835 141607864 -61477668 + (TA)n Simple_repeat Simple_repeat 2 30 0 3262 251 130 52 chr5 141607864 141609410 -61476122 + L1M4 LINE L1 3600 5420 -743 2370 211 66 100 chr5 141609765 141610587 -61474945 + MER21B LTR ERV1 12 805 -58 1528 250 65 21 chr5 141610677 141611189 -61474343 + L1ME LINE L1 4797 5330 -816 629 208 69 35 chr5 141611196 141611369 -61474163 + L1ME LINE L1 5375 5553 -613 2409 74 0 13 chr5 141613180 141613490 -61472042 + AluY SINE Alu 1 306 -5 7655 28 5 0 chr5 141613930 141615121 -61470411 - L1PA3 LINE L1 -1 6154 4962 2151 42 0 0 chr5 141615121 141615384 -61470148 + L1PA3 LINE L1 4695 4957 -1189 458 237 107 27 chr5 141615801 141616025 -61469507 - L1MC5 LINE L1 -444 7517 7276 5723 103 35 10 chr5 141616071 141617224 -61468308 - L1PB2 LINE L1 -5 6146 4995 864 240 113 94 chr5 141617225 141617776 -61467756 - L1MC5 LINE L1 -784 7177 6617 264 30 0 0 chr5 141618383 141618416 -61467116 + (TA)n Simple_repeat Simple_repeat 1 33 0 2055 128 7 0 chr5 141619377 141619665 -61465867 + AluSx SINE Alu 1 290 -22 264 239 0 0 chr5 141622959 141623020 -61462512 + (CATATA)n Simple_repeat Simple_repeat 1 64 -7 2489 60 0 0 chr5 141623020 141623318 -61462214 - AluY SINE Alu -13 298 1 264 239 0 0 chr5 141623318 141623327 -61462205 + (CATATA)n Simple_repeat Simple_repeat 63 71 0 25 0 0 0 chr5 141625648 141625673 -61459859 + AT_rich Low_complexity Low_complexity 1 25 0 2712 131 68 21 chr5 141625995 141626523 -61459009 - L1MB8 LINE L1 -9 6169 5617 5642 71 17 3 chr5 141626734 141627496 -61458036 + L1PA7 LINE L1 5369 6141 -13 540 321 46 18 chr5 141629227 141629622 -61455910 + L2 LINE L2 1831 2324 -990 276 102 0 0 chr5 141630104 141630153 -61455379 + (TA)n Simple_repeat Simple_repeat 1 49 0 2175 94 7 7 chr5 141630153 141630450 -61455082 - AluSx SINE Alu -13 299 3 307 263 153 17 chr5 141631031 141631149 -61454383 + L2 LINE L2 2926 3059 -254 549 284 93 0 chr5 141631376 141631559 -61453973 + MIR SINE MIR 1 200 -62 889 255 47 84 chr5 141631574 141631884 -61453648 + L1ME3A LINE L1 5518 5807 -363 1949 133 6 29 chr5 141631884 141632199 -61453333 + AluJb SINE Alu 5 312 0 889 255 47 84 chr5 141632199 141632339 -61453193 + L1ME3A LINE L1 5807 5951 -219 483 273 104 0 chr5 141632419 141632573 -61452959 + L1ME3A LINE L1 5965 6134 -36 296 207 24 49 chr5 141632604 141632686 -61452846 + MIR SINE MIR 183 262 0 1195 133 77 10 chr5 141634248 141634444 -61451088 - MER46A DNA MER2_type -2 234 26 319 268 21 21 chr5 141634462 141634559 -61450973 - MIR SINE MIR -116 146 50 5804 144 95 18 chr5 141634564 141635700 -61449832 + Tigger3b DNA MER2_type 8 1231 0 305 357 79 38 chr5 141635713 141635979 -61449553 + L1ME LINE L1 564 840 -5690 436 211 24 118 chr5 141636229 141636608 -61448924 + L1ME LINE L1 944 1410 -5120 * 1056 234 110 6 chr5 141636604 141636959 -61448573 + L1ME LINE L1 1654 2045 -4676 538 251 118 0 chr5 141637159 141637362 -61448170 + L1ME LINE L1 2333 2559 -3981 1242 137 87 36 chr5 141639009 141639228 -61446304 + MER30 DNA MER1_type 1 230 0 663 222 44 11 chr5 141639818 141639998 -61445534 + MER3 DNA MER1_type 1 186 -23 202 380 66 50 chr5 141640306 141640427 -61445105 + MIR SINE MIR 24 146 -62 307 245 78 20 chr5 141640525 141640627 -61444905 - L2 LINE L2 -6 3307 3200 548 79 0 0 chr5 141641025 141641101 -61444431 + MADE1 DNA Mariner 5 80 0 729 317 178 27 chr5 141641129 141641643 -61443889 - L2 LINE L2 -778 2536 1878 249 33 0 0 chr5 141641643 141641673 -61443859 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 729 317 178 27 chr5 141641673 141641887 -61443645 - L2 LINE L2 -1436 1878 1698 844 172 125 56 chr5 141642013 141642316 -61443216 + MER33 DNA MER1_type 1 324 0 382 311 201 5 chr5 141642496 141642705 -61442827 - L2 LINE L2 -689 2625 2376 1890 245 170 11 chr5 141643481 141644314 -61441218 + L2 LINE L2 2354 3307 -6 952 184 18 0 chr5 141645395 141645558 -61439974 - FAM SINE Alu -7 168 3 2421 94 3 0 chr5 141645607 141645915 -61439617 - AluSq SINE Alu -4 309 1 512 269 273 45 chr5 141646478 141646756 -61438776 + L2 LINE L2 1955 2168 -1146 300 27 0 0 chr5 141646756 141646793 -61438739 + (CA)n Simple_repeat Simple_repeat 2 38 0 512 269 273 45 chr5 141646793 141647182 -61438350 + L2 LINE L2 2168 2774 -540 274 344 100 17 chr5 141647191 141647371 -61438161 + L2 LINE L2 2887 3081 -191 480 281 119 99 chr5 141650262 141650526 -61435006 + L1M2 LINE L1 548 805 -6044 294 29 0 0 chr5 141650526 141650561 -61434971 + (CCG)n Simple_repeat Simple_repeat 3 37 0 480 281 119 99 chr5 141650561 141651427 -61434105 + L1M2 LINE L1 805 1444 -5405 2426 57 0 10 chr5 141652421 141652722 -61432810 - AluY SINE Alu -13 298 1 939 284 140 27 chr5 141653131 141653629 -61431903 - L2 LINE L2 0 3313 2771 1126 234 84 14 chr5 141653641 141654000 -61431532 - MLT1B LTR MaLR 0 390 7 1022 224 164 32 chr5 141654005 141654376 -61431156 - L2 LINE L2 -554 2760 2341 207 316 200 44 chr5 141654514 141654795 -61430737 - L2 LINE L2 -239 3033 2669 1691 139 32 42 chr5 141654795 141655105 -61430427 + AluJo SINE Alu 1 307 -5 207 316 200 44 chr5 141655105 141655200 -61430332 - L2 LINE L2 -603 2669 2590 345 342 44 0 chr5 141655201 141655359 -61430173 - MIR SINE MIR 0 262 98 2084 144 0 0 chr5 141656179 141656484 -61429048 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 141656600 141656621 -61428911 + AT_rich Low_complexity Low_complexity 1 21 0 896 235 40 45 chr5 141656987 141657142 -61428390 + MIR SINE MIR 6 161 -101 1800 143 35 21 chr5 141657142 141657428 -61428104 - AluJb SINE Alu -18 294 5 896 235 40 45 chr5 141657428 141657519 -61428013 + MIR SINE MIR 161 251 -11 718 132 9 9 chr5 141657865 141657979 -61427553 + FLAM_A SINE Alu 12 125 -17 237 314 118 0 chr5 141658596 141658698 -61426834 - L3b LINE CR1 -353 1230 1117 2279 97 7 13 chr5 141658934 141659243 -61426289 - AluSq SINE Alu -4 309 3 32 91 0 0 chr5 141659269 141659357 -61426175 + AT_rich Low_complexity Low_complexity 1 88 0 22 80 0 0 chr5 141659410 141659460 -61426072 + AT_rich Low_complexity Low_complexity 1 50 0 841 307 55 11 chr5 141659627 141660099 -61425433 - L1ME LINE L1 -297 5824 5332 351 343 57 12 chr5 141660444 141660689 -61424843 + LTR16A LTR ERVL 158 413 -37 242 182 36 36 chr5 141660881 141660936 -61424596 + LTR67 LTR ERVL 503 557 0 3445 115 51 10 chr5 141661131 141661637 -61423895 + MER1A DNA MER1_type 1 527 0 1808 154 39 21 chr5 141662458 141662790 -61422742 - THE1B LTR MaLR 0 364 27 1806 151 0 27 chr5 141662806 141663098 -61422434 + AluJb SINE Alu 11 294 -18 2442 94 0 0 chr5 141663098 141663405 -61422127 + AluSc SINE Alu 1 307 -2 676 262 8 52 chr5 141663825 141664092 -61421440 - L1ME LINE L1 -362 5808 5554 786 278 135 0 chr5 141664637 141665073 -61420459 - L1MC/D LINE L1 -2000 5808 5314 189 0 0 0 chr5 141666641 141666662 -61418870 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1852 134 8 0 chr5 141666672 141666933 -61418599 - AluSx SINE Alu -27 285 23 1792 232 26 24 chr5 141667335 141667796 -61417736 + LTR40b LTR ERVL 1 462 0 502 236 195 0 chr5 141667815 141667989 -61417543 - MER58C DNA MER1_type -6 209 2 323 214 24 0 chr5 141668254 141668380 -61417152 + L1MDa LINE L1 2452 2580 -3960 790 205 23 33 chr5 141668427 141668587 -61416945 - MSTD LTR MaLR -183 213 54 3149 155 84 43 chr5 141668587 141669285 -61416247 - LTR8A LTR ERV1 0 727 1 790 205 23 33 chr5 141669285 141669339 -61416193 - MSTD LTR MaLR -342 54 1 314 331 79 0 chr5 141669339 141669466 -61416066 + L1MDa LINE L1 2747 2883 -3657 589 247 6 28 chr5 141669644 141669826 -61415706 + MER5B DNA MER1_type 1 178 0 2368 83 0 3 chr5 141670526 141670827 -61414705 - AluY SINE Alu -8 303 4 1665 148 81 7 chr5 141670830 141671101 -61414431 - AluJb SINE Alu -21 291 1 569 237 124 24 chr5 141671149 141671318 -61414214 + MIR SINE MIR 6 191 -71 1513 191 58 9 chr5 141671495 141671930 -61413602 + MER89 LTR ERV1 1 557 -2 1876 124 52 0 chr5 141672856 141673156 -61412376 - AluSx SINE Alu 0 314 1 272 280 103 0 chr5 141673159 141673266 -61412266 + MIR SINE MIR 47 164 -98 282 167 48 83 chr5 141673280 141673364 -61412168 - MER34 LTR ERV1 0 542 462 212 234 16 62 chr5 141673612 141673676 -61411856 - MER5A DNA MER1_type -57 132 72 1394 194 75 17 chr5 141674461 141674806 -61410726 + MLT1A1 LTR MaLR 1 365 0 34 0 0 0 chr5 141675391 141675425 -61410107 + AT_rich Low_complexity Low_complexity 1 34 0 215 279 81 0 chr5 141676518 141676604 -61408928 + L2 LINE L2 2352 2444 -870 374 360 55 29 chr5 141679115 141679426 -61406106 + LTR16C LTR ERVL 141 459 -32 2359 84 3 3 chr5 141679555 141679865 -61405667 + AluY SINE Alu 1 310 -1 1416 184 12 31 chr5 141680068 141680324 -61405208 - AluJb SINE Alu -61 251 1 2149 109 53 6 chr5 141681270 141681590 -61403942 + MER1B DNA MER1_type 3 337 0 306 292 281 5 chr5 141682437 141682629 -61402903 - L1ME4a LINE L1 -230 5891 5647 1206 29 0 0 chr5 141683399 141683539 -61401993 - L1PA5 LINE L1 -9 6145 6006 1003 218 27 26 chr5 141683963 141684459 -61401073 - MLT1F1 LTR MaLR 0 567 1 31 26 0 0 chr5 141684741 141684779 -61400753 + AT_rich Low_complexity Low_complexity 1 38 0 24828 88 15 6 chr5 141684780 141690868 -61394664 - L1PA6 LINE L1 -8 6146 11 321 161 0 0 chr5 141690900 141690956 -61394576 - L1MB8 LINE L1 -6 6172 6117 279 279 57 19 chr5 141691560 141691718 -61393814 - L1ME4a LINE L1 -11 6110 5947 10108 75 36 1 chr5 141691845 141693354 -61392178 - L1P LINE L1 -2176 3970 2408 21 0 0 0 chr5 141694302 141694323 -61391209 + AT_rich Low_complexity Low_complexity 1 21 0 2114 148 94 7 chr5 141695250 141695656 -61389876 + L1MA9 LINE L1 5871 6311 -1 291 290 41 7 chr5 141695672 141695817 -61389715 + L1M4 LINE L1 2426 2575 -3571 560 288 44 15 chr5 141697835 141698040 -61387492 - MIR SINE MIR -17 245 35 724 319 90 16 chr5 141699033 141699616 -61385916 - MER115 DNA AcHobo 0 693 23 244 234 47 0 chr5 141700639 141700703 -61384829 + MIR3 SINE MIR 112 178 -30 233 200 62 31 chr5 141702528 141702593 -61382939 + LTR37B LTR ERV1 7 73 -395 745 245 64 16 chr5 141702663 141702912 -61382620 + LTR37B LTR ERV1 203 463 -5 483 279 13 32 chr5 141703078 141703232 -61382300 - MIR SINE MIR -108 154 4 220 399 72 0 chr5 141703422 141703575 -61381957 + L2 LINE L2 2317 2480 -834 830 201 26 53 chr5 141703671 141703910 -61381622 - Charlie2 DNA MER1_type -1 2861 2628 1838 136 6 77 chr5 141703910 141704234 -61381298 - AluSx SINE Alu -11 301 1 830 201 26 53 chr5 141704234 141704258 -61381274 - Charlie2 DNA MER1_type -234 2628 2605 3267 198 89 26 chr5 141704258 141705432 -61380100 + L1ME1 LINE L1 4902 6146 -20 579 167 0 0 chr5 141705463 141705553 -61379979 - LTR3b LTR ERVK 0 500 411 4593 187 42 31 chr5 141705553 141706607 -61378925 - HERVK3 LTR ERVK -653 5292 1321 393 267 0 38 chr5 141706595 141706700 -61378832 - HERVK3 LTR ERVK -6563 680 580 * 571 191 89 120 chr5 141706756 141706981 -61378551 - HERVK3 LTR ERVK -6971 272 55 257 62 0 0 chr5 141707024 141707056 -61378476 - HERVK3 LTR ERVK -7025 218 187 247 295 18 9 chr5 141707107 141707219 -61378313 + CT-rich Low_complexity Low_complexity 2 114 0 2088 164 12 9 chr5 141707315 141707657 -61377875 - LTR3b LTR ERVK 0 500 158 850 194 77 59 chr5 141707681 141707864 -61377668 - Charlie2 DNA MER1_type -268 2594 2401 1895 121 4 4 chr5 141707864 141708129 -61377403 - AluSq SINE Alu -20 293 29 850 194 77 59 chr5 141708129 141708285 -61377247 - Charlie2 DNA MER1_type -461 2401 2249 489 259 71 62 chr5 141708341 141708565 -61376967 - Charlie2 DNA MER1_type -2540 322 97 2857 143 14 14 chr5 141710093 141710519 -61375013 + MSTC LTR MaLR 1 426 -2 1855 135 3 7 chr5 141710643 141710951 -61374581 - AluJb SINE Alu 0 307 1 22 0 0 0 chr5 141713206 141713228 -61372304 + AT_rich Low_complexity Low_complexity 1 22 0 11468 187 52 17 chr5 141713228 141713284 -61372248 - L1PB1 LINE L1 0 6867 6814 2252 108 3 3 chr5 141713284 141713581 -61371951 - AluSg SINE Alu -13 297 1 11468 187 52 17 chr5 141713581 141719354 -61366178 - L1PB1 LINE L1 -53 6814 634 1083 177 5 5 chr5 141719354 141719552 -61365980 - L1PB1 LINE L1 -6663 200 3 1570 137 0 0 chr5 141719762 141719989 -61365543 + AluSg/x SINE Alu 76 302 -8 205 310 108 57 chr5 141720526 141720725 -61364807 - MIR SINE MIR -25 237 2 814 300 78 63 chr5 141722781 141723337 -61362195 + L2 LINE L2 2456 3022 -291 1695 273 91 13 chr5 141723671 141724474 -61361058 - L2 LINE L2 0 3313 2438 386 275 55 3 chr5 141724764 141724895 -61360637 - MLT1H LTR MaLR -3 587 427 21 36 0 0 chr5 141725595 141725623 -61359909 + AT_rich Low_complexity Low_complexity 1 28 0 329 254 157 15 chr5 141725853 141725987 -61359545 - L2 LINE L2 -710 2604 2452 2098 134 0 0 chr5 141726114 141726439 -61359093 + AluJb SINE Alu 1 312 0 234 203 38 25 chr5 141726463 141726542 -61358990 + L1ME4a LINE L1 5955 6034 -87 31 58 0 0 chr5 141726551 141726603 -61358929 + AT_rich Low_complexity Low_complexity 1 52 0 2263 102 3 6 chr5 141727144 141727458 -61358074 + AluSq SINE Alu 1 313 0 734 179 23 0 chr5 141727511 141727684 -61357848 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 242 179 0 0 chr5 141727685 141727724 -61357808 + (TGGG)n Simple_repeat Simple_repeat 4 42 0 193 262 164 0 chr5 141727725 141727786 -61357746 - MIR SINE MIR -74 134 64 385 303 62 19 chr5 141727913 141728075 -61357457 + MLT1F1 LTR MaLR 1 169 -398 3670 193 38 30 chr5 141728162 141729344 -61356188 - L1ME2 LINE L1 -10 6154 4883 1780 145 0 0 chr5 141729359 141729607 -61355925 - AluSq SINE Alu -65 248 1 2079 175 11 101 chr5 141729642 141729870 -61355662 - MLT1D LTR MaLR 0 505 258 1688 256 30 26 chr5 141729870 141730330 -61355202 + MLT1C LTR MaLR 3 464 -3 2079 175 11 101 chr5 141730330 141730451 -61355081 - MLT1D LTR MaLR -247 258 222 2510 57 7 0 chr5 141730451 141730751 -61354781 - AluY SINE Alu -9 302 1 2079 175 11 101 chr5 141730751 141730955 -61354577 - MLT1D LTR MaLR -283 222 1 2140 118 6 10 chr5 141733317 141733659 -61351873 - AluSp SINE Alu 0 341 1 181 255 39 0 chr5 141734090 141734141 -61351391 - MIR SINE MIR -160 102 50 2638 98 78 39 chr5 141734373 141734555 -61350977 + MSTA LTR MaLR 3 176 -252 1477 150 0 0 chr5 141734555 141734768 -61350764 + AluSg/x SINE Alu 88 300 -12 2638 98 78 39 chr5 141734768 141734994 -61350538 + MSTA LTR MaLR 176 427 -1 1943 152 3 0 chr5 141735304 141735600 -61349932 - AluSx SINE Alu -14 298 2 193 388 44 19 chr5 141735618 141735778 -61349754 + L2 LINE L2 2886 3049 -223 368 286 60 48 chr5 141737385 141737523 -61348009 + MIR3 SINE MIR 23 165 -43 1971 148 3 3 chr5 141737523 141737821 -61347711 - AluSx SINE Alu -14 298 1 368 286 60 48 chr5 141737821 141737850 -61347682 + MIR3 SINE MIR 165 192 -16 441 324 174 9 chr5 141738218 141738437 -61347095 - MIR SINE MIR -6 256 2 3085 161 26 30 chr5 141738477 141739042 -61346490 - MER101B LTR ERV1 0 570 8 331 188 0 0 chr5 141739052 141739116 -61346416 - MER31-int LTR ERV1 -3130 1806 1743 2175 156 8 20 chr5 141739137 141739527 -61346005 + MER101B LTR ERV1 186 570 0 375 176 14 0 chr5 141740105 141740179 -61345353 - MER116 DNA Mariner 0 80 6 22 56 0 0 chr5 141742973 141743009 -61342523 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr5 141743125 141743162 -61342370 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 141744077 141744107 -61341425 + AT_rich Low_complexity Low_complexity 1 30 0 251 277 15 0 chr5 141744686 141744751 -61340781 - MIR SINE MIR -70 138 73 655 241 74 56 chr5 141744906 141745122 -61340410 - MIR SINE MIR -30 232 13 1661 163 3 27 chr5 141745975 141746269 -61339263 - AluJo SINE Alu -14 298 12 925 208 24 9 chr5 141747904 141748116 -61337416 + L1MB7 LINE L1 5942 6156 -28 56 29 0 0 chr5 141750710 141750780 -61334752 + AT_rich Low_complexity Low_complexity 1 70 0 6103 87 8 0 chr5 141750780 141751743 -61333789 - L1PA8A LINE L1 -13 6118 5153 14302 111 26 17 chr5 141751743 141753056 -61332476 + L1P LINE L1 2928 4228 -1918 1824 128 50 0 chr5 141753056 141753182 -61332350 + AluSx SINE Alu 3 121 -191 437 17 0 34 chr5 141753182 141753241 -61332291 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1824 128 50 0 chr5 141753241 141753396 -61332136 + AluSx SINE Alu 121 298 -14 14302 111 26 17 chr5 141753396 141754166 -61331366 + L1P LINE L1 4228 5035 -1111 2235 101 0 7 chr5 141754166 141754464 -61331068 + AluSx SINE Alu 1 296 -16 14302 111 26 17 chr5 141754464 141754648 -61330884 + L1P LINE L1 5035 5216 -930 182 276 66 40 chr5 141756144 141756220 -61329312 - MIR SINE MIR -126 136 59 207 0 0 0 chr5 141756385 141756408 -61329124 + (TA)n Simple_repeat Simple_repeat 1 23 0 26 0 0 0 chr5 141758414 141758440 -61327092 + AT_rich Low_complexity Low_complexity 1 26 0 202 240 80 70 chr5 141758733 141758833 -61326699 + L3 LINE CR1 433 533 -1044 25 0 0 0 chr5 141759710 141759735 -61325797 + AT_rich Low_complexity Low_complexity 1 25 0 456 231 15 31 chr5 141760477 141760607 -61324925 + LTR33 LTR ERVL 2 129 -392 291 316 15 23 chr5 141760766 141760899 -61324633 + LTR33 LTR ERVL 382 513 -8 27 0 0 0 chr5 141761447 141761474 -61324058 + AT_rich Low_complexity Low_complexity 1 27 0 465 217 45 64 chr5 141762226 141762383 -61323149 + MIR SINE MIR 66 219 -43 33 0 0 0 chr5 141763221 141763254 -61322278 + AT_rich Low_complexity Low_complexity 1 33 0 303 312 187 21 chr5 141764853 141765190 -61320342 - L1M4 LINE L1 -3644 2502 2110 22 0 0 0 chr5 141765563 141765585 -61319947 + AT_rich Low_complexity Low_complexity 1 22 0 2282 70 0 18 chr5 141765603 141765910 -61319622 - AluY SINE Alu 0 303 2 531 209 209 34 chr5 141765949 141766188 -61319344 - HAL1 LINE L1 -860 1647 1367 344 352 51 6 chr5 141766751 141766927 -61318605 + L2 LINE L2 1131 1314 -2000 1080 300 194 56 chr5 141766930 141768046 -61317486 + L2 LINE L2 1436 2705 -609 727 285 35 27 chr5 141768061 141768317 -61317215 - MIR SINE MIR 0 262 5 367 306 27 41 chr5 141769541 141769688 -61315844 - MIR3 SINE MIR -45 163 19 23 0 0 0 chr5 141770778 141770801 -61314731 + AT_rich Low_complexity Low_complexity 1 23 0 825 281 91 49 chr5 141771515 141772210 -61313322 + L1ME LINE L1 57 780 -5290 1999 113 10 20 chr5 141773223 141773545 -61311987 + AluSx SINE Alu 1 312 0 214 225 43 43 chr5 141773619 141773757 -61311775 + (TATAA)n Simple_repeat Simple_repeat 5 142 0 32 43 0 0 chr5 141774968 141775014 -61310518 + AT_rich Low_complexity Low_complexity 1 46 0 441 266 26 0 chr5 141776344 141776457 -61309075 + L2 LINE L2 3189 3304 -9 183 347 173 0 chr5 141776899 141776974 -61308558 + L2 LINE L2 3140 3227 -45 2053 89 0 0 chr5 141777166 141777425 -61308107 + AluSx SINE Alu 35 293 -19 21 0 0 0 chr5 141777748 141777769 -61307763 + AT_rich Low_complexity Low_complexity 1 21 0 42618 32 24 1 chr5 141777769 141783772 -61301760 - L1PA3 LINE L1 -10 6145 1 181 346 59 10 chr5 141786163 141786264 -61299268 + MIR SINE MIR 157 262 0 2388 81 0 7 chr5 141790260 141790556 -61294976 + AluSq SINE Alu 1 294 -19 199 387 0 0 chr5 141791821 141791896 -61293636 + L2 LINE L2 3190 3264 -49 267 298 48 24 chr5 141792787 141792871 -61292661 + L2 LINE L2 3228 3313 0 26 82 0 0 chr5 141793578 141793639 -61291893 + AT_rich Low_complexity Low_complexity 1 61 0 342 0 0 0 chr5 141794288 141794326 -61291206 + (TA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr5 141794326 141794347 -61291185 + AT_rich Low_complexity Low_complexity 1 21 0 196 325 175 33 chr5 141794631 141794751 -61290781 - L2 LINE L2 0 3272 3136 1383 271 41 95 chr5 141797170 141797574 -61287958 + L2 LINE L2 2154 2507 -807 1853 71 0 0 chr5 141797574 141797799 -61287733 + AluY SINE Alu 81 305 -6 1383 271 41 95 chr5 141797799 141798078 -61287454 + L2 LINE L2 2507 2800 -514 251 224 35 0 chr5 141798078 141798136 -61287396 - MER5B DNA MER1_type -1 177 118 2040 106 29 0 chr5 141798234 141798538 -61286994 - AluSc SINE Alu 0 312 1 5497 178 81 36 chr5 141799003 141800464 -61285068 - Looper DNA T2_type 0 1558 32 263 296 49 49 chr5 141800499 141800746 -61284786 - L1ME LINE L1 -580 5582 5336 377 282 145 0 chr5 141800757 141800881 -61284651 + MER5B DNA MER1_type 36 177 -1 356 200 38 67 chr5 141801138 141801243 -61284289 + L2 LINE L2 3163 3264 -49 471 267 13 40 chr5 141801783 141801933 -61283599 + MIR3 SINE MIR 25 170 -38 308 145 0 16 chr5 141802490 141802552 -61282980 + (TA)n Simple_repeat Simple_repeat 1 61 0 185 138 0 75 chr5 141803383 141803463 -61282069 + (TTAA)n Simple_repeat Simple_repeat 3 76 0 1544 201 10 0 chr5 141804144 141804433 -61281099 - AluJo SINE Alu -17 295 4 429 302 114 10 chr5 141804665 141804867 -61280665 - HAL1b LINE L1 -291 1057 835 434 221 201 66 chr5 141804915 141805204 -61280328 - HAL1b LINE L1 -594 754 427 20779 92 16 16 chr5 141805221 141808527 -61277005 - L1PA7 LINE L1 -3 6151 2839 2278 105 0 10 chr5 141808527 141808841 -61276691 - AluY SINE Alu 0 311 1 20779 92 16 16 chr5 141808841 141809448 -61276084 - L1PA7 LINE L1 -3315 2839 2234 204 158 0 0 chr5 141811360 141811398 -61274134 + (TG)n Simple_repeat Simple_repeat 1 38 0 2263 112 3 0 chr5 141811548 141811860 -61273672 - AluSp SINE Alu 0 313 1 289 309 132 41 chr5 141813324 141813544 -61271988 - MIR SINE MIR -3 259 20 443 271 104 35 chr5 141814087 141814231 -61271301 - MIR SINE MIR -104 158 5 478 352 93 31 chr5 141815122 141815606 -61269926 - L2 LINE L2 -160 3112 2601 22 70 0 0 chr5 141817445 141817488 -61268044 + AT_rich Low_complexity Low_complexity 1 43 0 288 91 0 0 chr5 141817590 141817634 -61267898 + (TG)n Simple_repeat Simple_repeat 2 45 0 333 0 0 0 chr5 141817762 141817799 -61267733 + (CA)n Simple_repeat Simple_repeat 1 37 0 359 281 0 43 chr5 141818045 141818209 -61267323 + GA-rich Low_complexity Low_complexity 2 158 0 198 143 0 0 chr5 141819026 141819061 -61266471 + (TG)n Simple_repeat Simple_repeat 2 36 0 878 309 105 12 chr5 141820112 141820209 -61265323 + Charlie7 DNA MER1_type 1 88 -2524 653 241 99 5 chr5 141820209 141820400 -61265132 + MER3 DNA MER1_type 1 209 0 878 309 105 12 chr5 141820400 141820881 -61264651 + Charlie7 DNA MER1_type 88 633 -1979 1319 151 158 26 chr5 141823262 141823534 -61261998 + AluJo SINE Alu 5 312 0 677 254 168 0 chr5 141824522 141824719 -61260813 + MIR SINE MIR 10 239 -23 318 50 0 0 chr5 141824719 141824759 -61260773 + (TC)n Simple_repeat Simple_repeat 2 41 0 964 252 16 28 chr5 141825360 141825756 -61259776 + LTR16A LTR ERVL 25 446 -4 2343 95 3 0 chr5 141826654 141826949 -61258583 - AluSp SINE Alu -16 297 2 1493 193 36 26 chr5 141827871 141827990 -61257542 + AluJo SINE Alu 1 117 -195 201 39 0 0 chr5 141827990 141828016 -61257516 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1493 193 36 26 chr5 141828016 141828201 -61257331 + AluJo SINE Alu 117 308 -4 2565 69 0 0 chr5 141828620 141828923 -61256609 - AluSq SINE Alu -10 303 1 273 340 39 0 chr5 141829548 141829651 -61255881 - L2 LINE L2 -3 3269 3163 228 152 0 0 chr5 141830524 141830580 -61254952 - Alu SINE Alu 0 312 257 1305 132 0 0 chr5 141830584 141830758 -61254774 + AluSq SINE Alu 6 179 -134 407 176 17 92 chr5 141831382 141831501 -61254031 + MER102b DNA MER1_type 232 341 0 2108 126 0 26 chr5 141831707 141832009 -61253523 - AluSx SINE Alu -18 294 1 24 0 0 0 chr5 141832247 141832271 -61253261 + AT_rich Low_complexity Low_complexity 1 24 0 2189 95 34 0 chr5 141834200 141834494 -61251038 + AluSx SINE Alu 1 304 -8 841 132 8 0 chr5 141835035 141835164 -61250368 + FLAM_C SINE Alu 13 142 -1 2494 83 0 0 chr5 141835187 141835489 -61250043 + AluSq SINE Alu 1 302 -11 602 154 0 45 chr5 141835678 141835788 -61249744 - FLAM_C SINE Alu -38 105 1 260 271 90 8 chr5 141836157 141836279 -61249253 - L1ME4a LINE L1 -1 6120 5989 362 253 221 19 chr5 141836547 141836701 -61248831 - MER5A DNA MER1_type 0 189 5 1972 137 17 7 chr5 141836813 141837106 -61248426 + AluJb SINE Alu 1 296 -16 882 226 71 29 chr5 141837558 141837797 -61247735 - MIR SINE MIR -4 258 10 2371 291 98 21 chr5 141837966 141839162 -61246370 - L2 LINE L2 -136 3177 1901 1670 185 0 13 chr5 141846386 141846688 -61238844 - AluJo SINE Alu -14 298 1 2051 116 7 3 chr5 141847112 141847413 -61238119 - AluSx SINE Alu -10 302 1 867 224 6 0 chr5 141847444 141847623 -61237909 + MLT1B LTR MaLR 2 181 -209 260 176 0 14 chr5 141849565 141849639 -61235893 + (TA)n Simple_repeat Simple_repeat 2 74 0 24 96 0 0 chr5 141850174 141850247 -61235285 + AT_rich Low_complexity Low_complexity 1 73 0 686 265 25 20 chr5 141850685 141850885 -61234647 - MIR SINE MIR 0 262 62 229 244 47 35 chr5 141850964 141851050 -61234482 - L1ME4a LINE L1 -327 5794 5708 309 336 155 26 chr5 141851096 141851367 -61234165 - L1ME4a LINE L1 -2190 5618 5313 302 340 36 86 chr5 141851891 141852170 -61233362 + L2 LINE L2 2940 3204 -68 245 133 0 0 chr5 141852333 141852378 -61233154 + LTR66 LTR ERVL 394 438 -172 315 191 56 45 chr5 141852379 141852468 -61233064 - L1MCa LINE L1 -4363 2063 1974 1312 150 98 47 chr5 141852600 141852874 -61232658 - AluJo SINE Alu -24 288 1 205 258 268 31 chr5 141853341 141853438 -61232094 + L2 LINE L2 3188 3307 -6 335 313 52 57 chr5 141853818 141854048 -61231484 - MIR SINE MIR -30 232 4 665 71 9 54 chr5 141855022 141855134 -61230398 - HY1 scRNA scRNA -1 111 5 559 181 8 8 chr5 141855330 141855457 -61230075 + CT-rich Low_complexity Low_complexity 2 128 0 2137 106 3 17 chr5 141855459 141855751 -61229781 - AluSx SINE Alu -21 291 4 256 243 243 0 chr5 141855969 141856043 -61229489 - MIR SINE MIR 0 262 171 1925 172 0 0 chr5 141856410 141856713 -61228819 - AluJb SINE Alu -9 303 1 850 156 0 0 chr5 141856713 141856848 -61228684 - AluJb SINE Alu -177 135 1 1604 177 77 13 chr5 141858111 141858489 -61227043 - L1MB7 LINE L1 -3 6181 5780 1878 149 6 16 chr5 141859675 141859990 -61225542 + AluJo SINE Alu 1 312 0 22 35 0 0 chr5 141860148 141860177 -61225355 + AT_rich Low_complexity Low_complexity 1 29 0 209 228 35 35 chr5 141861290 141861347 -61224185 + L2 LINE L2 3209 3265 -48 21 0 0 0 chr5 141864867 141864888 -61220644 + AT_rich Low_complexity Low_complexity 1 21 0 254 309 107 12 chr5 141865705 141865789 -61219743 + MER91C DNA MER1_type 26 117 -23 498 356 124 38 chr5 141866075 141866817 -61218715 + L2 LINE L2 1864 2669 -645 937 288 61 0 chr5 141866839 141867103 -61218429 + L1MEd LINE L1 37 316 -6080 * 2601 226 82 14 chr5 141867088 141868238 -61217294 + L1ME1 LINE L1 4809 6025 -141 596 218 19 13 chr5 141868252 141868408 -61217124 + L1MA10 LINE L1 6176 6332 -2 5452 125 28 3 chr5 141868972 141870617 -61214915 - L1PA15 LINE L1 -2 6814 5127 8761 235 61 16 chr5 141870654 141873117 -61212415 - L1PA15 LINE L1 -2291 4506 1942 2718 263 77 21 chr5 141873148 141873911 -61211621 - L1PA15 LINE L1 -5981 806 1 4546 207 123 22 chr5 141874191 141875200 -61210332 + Charlie1a DNA MER1_type 1 1177 -1584 240 35 0 0 chr5 141875200 141875229 -61210303 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 4546 207 123 22 chr5 141875229 141875540 -61209992 + Charlie1a DNA MER1_type 1177 1455 0 21 0 0 0 chr5 141876186 141876207 -61209325 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 141877906 141877928 -61207604 + AT_rich Low_complexity Low_complexity 1 22 0 1633 169 0 0 chr5 141878716 141878970 -61206562 - AluJb SINE Alu -25 287 34 1237 284 165 30 chr5 141879540 141880311 -61205221 - L2 LINE L2 -243 3070 2186 194 303 34 22 chr5 141880313 141880402 -61205130 - L2 LINE L2 -1312 2002 1913 783 295 66 60 chr5 141881903 141882621 -61202911 + L1MEd LINE L1 506 1264 -5132 2179 117 73 9 chr5 141882621 141882963 -61202569 + THE1B LTR MaLR 1 364 0 783 295 66 60 chr5 141882963 141883521 -61202011 + L1MEd LINE L1 1264 1817 -4579 21 36 0 0 chr5 141883624 141883652 -61201880 + AT_rich Low_complexity Low_complexity 1 28 0 503 284 60 91 chr5 141883795 141884681 -61200851 + L1MEd LINE L1 2148 2967 -3248 2690 79 3 0 chr5 141884725 141885079 -61200453 + THE1A LTR MaLR 1 355 0 21 0 0 0 chr5 141885394 141885415 -61200117 + AT_rich Low_complexity Low_complexity 1 21 0 2111 104 3 3 chr5 141885418 141885707 -61199825 + AluSc SINE Alu 1 289 -20 238 232 0 0 chr5 141887282 141887338 -61198194 - MER5C DNA MER1_type -199 125 70 1717 152 3 68 chr5 141888807 141889130 -61196402 + AluSx SINE Alu 1 302 -10 4011 172 28 8 chr5 141890057 141890772 -61194760 - MER44D DNA MER2_type -1 604 4 543 298 38 12 chr5 141891092 141891281 -61194251 + MIR SINE MIR 23 219 -43 194 289 19 0 chr5 141891344 141891396 -61194136 - MIR SINE MIR -132 130 78 228 250 0 31 chr5 141891463 141891527 -61194005 + (CTA)n Simple_repeat Simple_repeat 2 63 0 23 0 0 0 chr5 141894844 141894867 -61190665 + AT_rich Low_complexity Low_complexity 1 23 0 2641 171 109 70 chr5 141894946 141895741 -61189791 - LTR1B LTR ERV1 0 826 1 434 261 62 15 chr5 141896303 141896433 -61189099 - MLT1L LTR MaLR -333 282 147 207 0 0 0 chr5 141896489 141896512 -61189020 + (CAA)n Simple_repeat Simple_repeat 2 24 0 490 315 189 33 chr5 141896547 141897385 -61188147 - L2 LINE L2 -415 2899 1932 4609 168 30 21 chr5 141898033 141898932 -61186600 - L1MB8 LINE L1 -6 6983 6077 5524 153 17 4 chr5 141898987 141899935 -61185597 - L1MA4A LINE L1 -5 6298 5339 2258 102 7 0 chr5 141899944 141900239 -61185293 - AluSp SINE Alu -13 300 4 11506 173 42 22 chr5 141900244 141902759 -61182773 - L1MA4A LINE L1 -908 5238 2673 2197 233 73 45 chr5 141902753 141903613 -61181919 - L1MB8 LINE L1 -1481 5476 4593 * 2282 87 3 13 chr5 141903613 141903912 -61181620 - AluSp SINE Alu -17 296 1 367 261 0 43 chr5 141903997 141904112 -61181420 - L1MB8 LINE L1 -6738 121 12 1804 223 93 17 chr5 141905719 141906181 -61179351 + MLT1D LTR MaLR 7 503 -2 241 311 14 14 chr5 141906689 141906763 -61178769 - MER5A DNA MER1_type -11 178 105 421 331 164 33 chr5 141907034 141907160 -61178372 - L2 LINE L2 -248 3065 2957 2454 116 28 0 chr5 141907160 141907514 -61178018 - THE1B LTR MaLR 0 364 1 421 331 164 33 chr5 141907514 141908139 -61177393 - L2 LINE L2 -356 2957 2212 269 338 83 28 chr5 141908178 141908394 -61177138 - L2 LINE L2 -1408 1906 1679 192 254 0 0 chr5 141908910 141908969 -61176563 + CT-rich Low_complexity Low_complexity 2 60 0 2949 268 70 32 chr5 141910743 141911055 -61174477 + L2 LINE L2 2034 2333 -980 4537 146 26 23 chr5 141911055 141911834 -61173698 + LTR39 LTR ERV1 1 781 -2 2949 268 70 32 chr5 141911834 141912732 -61172800 + L2 LINE L2 2333 3311 -2 2090 104 0 21 chr5 141914489 141914803 -61170729 + AluSx SINE Alu 11 318 0 3673 189 47 6 chr5 141915212 141915916 -61169616 - MER44D DNA MER2_type 0 605 1 21 82 0 0 chr5 141916138 141916187 -61169345 + AT_rich Low_complexity Low_complexity 1 49 0 1113 158 103 0 chr5 141916302 141916505 -61169027 + MER58A DNA MER1_type 1 224 0 1969 159 35 22 chr5 141916673 141917043 -61168489 - THE1C LTR MaLR 0 375 1 266 290 0 0 chr5 141918480 141918542 -61166990 + CT-rich Low_complexity Low_complexity 1 62 0 204 40 0 0 chr5 141920562 141920587 -61164945 + (A)n Simple_repeat Simple_repeat 1 25 0 296 269 72 42 chr5 141921076 141921269 -61164263 + L1ME3A LINE L1 5685 5883 -286 563 120 0 10 chr5 141921634 141921734 -61163798 + (TAGA)n Simple_repeat Simple_repeat 1 99 0 1665 150 0 8 chr5 141921921 141922181 -61163351 - AluSx SINE Alu -54 258 1 237 286 48 0 chr5 141922684 141922768 -61162764 - L1MC4a LINE L1 -1643 6165 6078 195 42 0 0 chr5 141922850 141922874 -61162658 + (CA)n Simple_repeat Simple_repeat 2 25 0 667 308 75 32 chr5 141922906 141923373 -61162159 - L1MC4a LINE L1 -1922 5886 5400 411 272 152 85 chr5 141923402 141924094 -61161438 - L1MC4a LINE L1 -762 5384 4647 2197 122 128 13 chr5 141924153 141924537 -61160995 - MSTA LTR MaLR 0 428 1 809 316 20 4 chr5 141925264 141925517 -61160015 + MIR SINE MIR 6 262 0 31 0 0 0 chr5 141925826 141925857 -61159675 + AT_rich Low_complexity Low_complexity 1 31 0 245 109 22 0 chr5 141926626 141926672 -61158860 + (CA)n Simple_repeat Simple_repeat 2 48 0 386 204 144 30 chr5 141927293 141927425 -61158107 - L2 LINE L2 -2 3311 3165 21 0 0 0 chr5 141927705 141927726 -61157806 + AT_rich Low_complexity Low_complexity 1 21 0 2841 22 0 0 chr5 141927942 141928259 -61157273 - AluYb8 SINE Alu -1 317 1 342 316 117 68 chr5 141930643 141930737 -61154795 - L1ME3A LINE L1 -226 5944 5856 6619 110 27 31 chr5 141930737 141931812 -61153720 + MER11C LTR ERVK 1 1071 0 342 316 117 68 chr5 141931812 141932112 -61153420 - L1ME3A LINE L1 -314 5856 5531 2190 90 3 32 chr5 141932189 141932501 -61153031 - AluSp SINE Alu -10 303 1 587 254 68 24 chr5 141932882 141933177 -61152355 + L1MCa LINE L1 1816 2227 -4380 247 219 8 16 chr5 141933231 141933359 -61152173 + (CTATA)n Simple_repeat Simple_repeat 3 129 0 2702 255 50 21 chr5 141933372 141934589 -61150943 + L1MCa LINE L1 2211 3428 -2998 231 277 10 20 chr5 141934919 141935020 -61150512 - L1MC/D LINE L1 -1897 5911 5812 195 42 0 0 chr5 141935269 141935293 -61150239 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1977 103 4 7 chr5 141935314 141935587 -61149945 - AluSx SINE Alu -40 272 1 22 56 0 0 chr5 141935936 141935972 -61149560 + AT_rich Low_complexity Low_complexity 1 36 0 29 70 0 0 chr5 141936370 141936427 -61149105 + AT_rich Low_complexity Low_complexity 1 57 0 876 214 5 36 chr5 141936617 141936813 -61148719 - L1PB4 LINE L1 -1 6155 5966 533 309 116 15 chr5 141937125 141937384 -61148148 + L2 LINE L2 2400 2684 -630 30 0 0 0 chr5 141938903 141938933 -61146599 + AT_rich Low_complexity Low_complexity 1 30 0 21581 131 12 23 chr5 141939399 141945885 -61139647 + L1PA8A LINE L1 6 6486 -1 611 259 40 20 chr5 141946760 141946961 -61138571 - L2 LINE L2 0 3313 3109 21 0 0 0 chr5 141947011 141947032 -61138500 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 141947946 141947968 -61137564 + AT_rich Low_complexity Low_complexity 1 22 0 682 287 21 0 chr5 141949018 141949206 -61136326 + Charlie8 DNA MER1_type 9 200 -2217 378 241 214 0 chr5 141949708 141949853 -61135679 + MER5A DNA MER1_type 8 183 -6 300 247 132 81 chr5 141950933 141951168 -61134364 - L3b LINE CR1 -113 1470 1224 2672 203 62 51 chr5 141951836 141952545 -61132987 - L1MB7 LINE L1 -2 6182 5466 281 288 0 0 chr5 141952918 141952977 -61132555 - L2 LINE L2 -20 3293 3235 1789 79 4 4 chr5 141953210 141953439 -61132093 + AluY SINE Alu 71 299 -12 910 330 96 22 chr5 141953737 141954362 -61131170 - L2 LINE L2 -942 2372 1702 446 340 5 23 chr5 141954400 141954615 -61130917 - L2 LINE L2 -2173 1141 931 344 277 106 0 chr5 141954706 141954800 -61130732 + MER91C DNA MER1_type 5 108 -32 24 0 0 0 chr5 141955438 141955462 -61130070 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 141955531 141955554 -61129978 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2468 171 17 40 chr5 141955927 141956401 -61129131 + L1MB3 LINE L1 5667 6129 -54 2351 91 3 0 chr5 141956401 141956699 -61128833 + AluSp SINE Alu 1 299 -14 2468 171 17 40 chr5 141956699 141956751 -61128781 + L1MB3 LINE L1 6129 6181 -2 413 354 60 13 chr5 141956899 141957213 -61128319 - L1MC/D LINE L1 -2043 5765 5437 193 221 95 108 chr5 141957323 141957481 -61128051 - MIR SINE MIR -101 161 6 369 305 53 78 chr5 141959378 141959735 -61125797 + HAL1 LINE L1 1206 1553 -954 407 299 101 49 chr5 141960183 141960548 -61124984 + L1M4 LINE L1 2140 2523 -3623 1025 166 26 16 chr5 141960980 141961173 -61124359 - MER3 DNA MER1_type 0 209 15 25 31 0 0 chr5 141961400 141961432 -61124100 + AT_rich Low_complexity Low_complexity 1 32 0 459 352 20 15 chr5 141961460 141961656 -61123876 - MIR SINE MIR -51 211 15 278 336 134 0 chr5 141962333 141962452 -61123080 - MIR3 SINE MIR -36 172 38 316 240 40 10 chr5 141962698 141962798 -61122734 + MER103 DNA DNA 62 164 -2 180 250 0 0 chr5 141963265 141963313 -61122219 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 730 245 19 0 chr5 141963325 141963484 -61122048 - MIR SINE MIR -41 221 60 1249 254 0 0 chr5 141963546 141963818 -61121714 + AluJo SINE Alu 11 282 -30 405 0 0 0 chr5 141963824 141963869 -61121663 + (TC)n Simple_repeat Simple_repeat 2 46 0 230 87 0 0 chr5 141963883 141963929 -61121603 - LTR66 LTR ERVL -171 439 394 274 133 63 14 chr5 141963943 141964086 -61121446 + (TA)n Simple_repeat Simple_repeat 1 150 0 378 289 83 69 chr5 141964215 141964433 -61121099 + MIR SINE MIR 7 227 -35 1065 102 0 85 chr5 141964439 141964640 -61120892 + AluSg/x SINE Alu 121 306 0 437 233 47 31 chr5 141966281 141966410 -61119122 + LTR67 LTR ERVL 427 557 0 2671 110 96 0 chr5 141966793 141967212 -61118320 + L1PA16 LINE L1 5699 6157 -9 367 237 106 5 chr5 141968322 141968524 -61117008 + L1ME4a LINE L1 5254 5473 -849 545 239 22 83 chr5 141968525 141968755 -61116777 - MIR SINE MIR -31 231 16 355 292 31 98 chr5 141968820 141968921 -61116611 + L1ME4a LINE L1 5582 5688 -474 1943 154 3 0 chr5 141968921 141969214 -61116318 - AluJo SINE Alu -18 294 1 355 292 31 98 chr5 141969214 141969478 -61116054 + L1ME4a LINE L1 5688 5924 -238 2412 65 22 6 chr5 141970516 141970840 -61114692 - L1PA6 LINE L1 -4 6150 5822 998 232 58 84 chr5 141970887 141971301 -61114231 + MLT1I LTR MaLR 7 409 0 284 315 107 6 chr5 141971392 141971570 -61113962 + L2 LINE L2 3118 3313 0 26 64 0 0 chr5 141971577 141971624 -61113908 + AT_rich Low_complexity Low_complexity 1 47 0 5869 36 3 0 chr5 141972392 141973091 -61112441 - L1PA3 LINE L1 0 6155 5455 327 361 56 0 chr5 141973540 141973684 -61111848 - MIR SINE MIR -31 231 80 256 310 0 70 chr5 141973818 141973918 -61111614 + MIR SINE MIR 16 108 -100 244 211 0 0 chr5 141974004 141974061 -61111471 + L1ME4a LINE L1 6063 6119 -2 21 0 0 0 chr5 141974553 141974574 -61110958 + AT_rich Low_complexity Low_complexity 1 21 0 266 271 17 0 chr5 141974591 141974650 -61110882 + L2 LINE L2 3210 3269 -3 2445 94 0 0 chr5 141976412 141976721 -61108811 + AluSq SINE Alu 1 309 -4 221 256 72 104 chr5 141976884 141977009 -61108523 - L2 LINE L2 -7 3265 3145 315 272 162 0 chr5 141977299 141977435 -61108097 - MIR SINE MIR -1 261 104 442 338 109 22 chr5 141977695 141977970 -61107562 - L2 LINE L2 -778 2536 2238 5163 205 50 15 chr5 141977978 141979408 -61106124 + L1M4 LINE L1 555 2013 -4842 3907 218 49 74 chr5 141979473 141980962 -61104570 + L1M4 LINE L1 3880 5331 -1626 381 223 108 36 chr5 141981447 141981586 -61103946 + MER91B DNA MER1_type 34 182 -8 669 265 5 43 chr5 141983274 141983459 -61102073 - MER5B DNA MER1_type 0 178 1 194 340 10 31 chr5 141983469 141983566 -61101966 + MER5B DNA MER1_type 84 178 0 297 0 0 0 chr5 141984120 141984153 -61101379 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2468 67 0 6 chr5 141984322 141984635 -61100897 - AluY SINE Alu 0 311 1 240 35 0 0 chr5 141984748 141984777 -61100755 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 317 303 92 27 chr5 141985725 141985910 -61099622 + HAL1b LINE L1 100 296 -1052 462 229 21 21 chr5 141985928 141986072 -61099460 + HAL1b LINE L1 343 486 -862 684 245 95 24 chr5 141986197 141986491 -61099041 + HAL1b LINE L1 343 657 -691 26 0 0 0 chr5 141986657 141986683 -61098849 + AT_rich Low_complexity Low_complexity 1 26 0 2058 133 64 9 chr5 141986880 141987225 -61098307 + THE1B LTR MaLR 1 364 0 10198 101 50 16 chr5 141987225 141988753 -61096779 + THE1B-int LTR MaLR 1 1580 0 2141 152 25 0 chr5 141988753 141989108 -61096424 + THE1B LTR MaLR 1 364 0 316 261 78 7 chr5 141989345 141989363 -61096169 - L1MA10 LINE L1 -2 6332 6315 1517 267 37 30 chr5 141989363 141989988 -61095544 - L1ME1 LINE L1 -11 6224 5596 364 167 0 0 chr5 141989995 141990055 -61095477 - L1ME1 LINE L1 -793 5518 5459 2708 249 106 13 chr5 141990107 141991169 -61094363 - L1ME1 LINE L1 -1538 4677 3505 1073 220 87 22 chr5 141991169 141991492 -61094040 + MER2 DNA MER2_type 1 344 0 2708 249 106 13 chr5 141991492 141991548 -61093984 - L1ME1 LINE L1 -2710 3505 3456 4214 274 62 21 chr5 141991588 141994048 -61091484 - L1ME1 LINE L1 -3417 2798 247 1323 134 60 0 chr5 141994048 141994264 -61091268 + MER30 DNA MER1_type 1 229 -1 4214 274 62 21 chr5 141994264 141994503 -61091029 - L1ME1 LINE L1 -5968 247 19 333 335 185 0 chr5 141994768 141994968 -61090564 + MIR SINE MIR 16 252 -10 2256 92 3 7 chr5 141996121 141996426 -61089106 + AluSx SINE Alu 1 304 -8 193 263 88 25 chr5 141996453 141996533 -61088999 - MIR SINE MIR 0 262 178 278 264 18 100 chr5 141996949 141997059 -61088473 - MIR SINE MIR -1 261 161 270 242 0 16 chr5 141997066 141997128 -61088404 - MER46C DNA MER2_type -2 336 276 211 340 0 30 chr5 141997658 141997758 -61087774 + CT-rich Low_complexity Low_complexity 5 101 0 198 0 0 0 chr5 141997916 141997938 -61087594 + (TG)n Simple_repeat Simple_repeat 1 22 0 32 0 0 0 chr5 141998455 141998487 -61087045 + AT_rich Low_complexity Low_complexity 1 32 0 215 322 64 58 chr5 141999318 141999489 -61086043 + L3 LINE CR1 1368 1539 -38 23 0 0 0 chr5 142000600 142000623 -61084909 + AT_rich Low_complexity Low_complexity 1 23 0 353 310 105 35 chr5 142002598 142002827 -61082705 + MLT1L LTR MaLR 364 608 -7 214 338 8 23 chr5 142003697 142003830 -61081702 + A-rich Low_complexity Low_complexity 5 135 0 3522 84 8 0 chr5 142004947 142005425 -61080107 + L1PA10 LINE L1 5682 6163 -5 1058 165 43 20 chr5 142005800 142006055 -61079477 + Charlie1 DNA MER1_type 2501 2761 0 267 411 54 0 chr5 142006056 142006185 -61079347 + L2 LINE L2 3117 3252 -20 268 278 96 26 chr5 142006293 142006408 -61079124 + MIR SINE MIR 107 229 -33 283 159 0 0 chr5 142006932 142006976 -61078556 - L2 LINE L2 -5 3308 3265 1731 307 95 38 chr5 142007193 142008355 -61077177 + L2 LINE L2 2004 3238 -75 282 222 56 11 chr5 142009289 142009379 -61076153 - L1ME4a LINE L1 0 6121 6028 349 264 106 85 chr5 142009544 142009603 -61075929 + MER113 DNA MER1_type? 6 62 -459 1418 215 52 9 chr5 142009603 142009929 -61075603 + MER58B DNA MER1_type 2 341 0 349 264 106 85 chr5 142009929 142010073 -61075459 + MER113 DNA MER1_type? 62 201 -320 4150 139 41 14 chr5 142010073 142010807 -61074725 + L1MB3 LINE L1 5430 6183 0 349 264 106 85 chr5 142010807 142010932 -61074600 + MER113 DNA MER1_type? 201 342 -179 3745 123 61 28 chr5 142011345 142012052 -61073480 + Tigger3(Golem) DNA MER2_type 2299 3028 -1 608 154 73 59 chr5 142012055 142012167 -61073365 - MLT1B LTR MaLR -3 387 271 2283 104 0 0 chr5 142012167 142012476 -61073056 - AluSc SINE Alu 0 309 1 608 154 73 59 chr5 142012476 142012499 -61073033 - MLT1B LTR MaLR -119 271 250 1438 122 43 141 chr5 142012623 142012950 -61072582 + AluSg SINE Alu 2 296 -4 2256 197 29 6 chr5 142013282 142013760 -61071772 + L1PB4 LINE L1 5668 6156 0 28 91 0 0 chr5 142013760 142013837 -61071695 + AT_rich Low_complexity Low_complexity 1 77 0 302 95 0 0 chr5 142013914 142013956 -61071576 - L1P LINE L1 -1413 4733 4692 6485 257 11 5 chr5 142014068 142015816 -61069716 + L1P LINE L1 1868 3627 -2519 3727 155 47 9 chr5 142015916 142016296 -61069236 - MER4D LTR ERV1 -98 805 390 2259 150 28 2 chr5 142016296 142016689 -61068843 - MER57A LTR ERV1 0 403 1 3727 155 47 9 chr5 142016689 142016942 -61068590 - MER4D LTR ERV1 -513 390 148 565 216 12 24 chr5 142017048 142017215 -61068317 - MER96B DNA MER1_type? -67 350 186 261 208 42 94 chr5 142017217 142017313 -61068219 + MER96B DNA MER1_type? 311 401 -16 213 108 0 0 chr5 142017766 142017803 -61067729 + (CA)n Simple_repeat Simple_repeat 1 37 0 273 128 0 0 chr5 142017925 142017972 -61067560 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 324 247 12 0 chr5 142018061 142018146 -61067386 + L1MC4a LINE L1 6218 6303 -1505 * 1049 209 66 0 chr5 142018141 142018420 -61067112 - L1M4 LINE L1 -2076 4070 3776 1597 219 14 19 chr5 142018544 142018904 -61066628 + MLT1A1 LTR MaLR 1 358 -7 533 296 20 50 chr5 142019017 142019216 -61066316 + L2 LINE L2 2897 3089 -224 357 62 0 0 chr5 142019548 142019596 -61065936 + (GA)n Simple_repeat Simple_repeat 1 48 0 1473 191 70 35 chr5 142019869 142020266 -61065266 + L1MA9 LINE L1 3255 3665 -2481 * 1843 174 6 3 chr5 142020250 142020577 -61064955 + L1MA9 LINE L1 5471 5798 -514 292 123 15 15 chr5 142020579 142020644 -61064888 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 2571 157 43 14 chr5 142020644 142021159 -61064373 + L1MA9 LINE L1 5783 6312 0 32 26 0 0 chr5 142021159 142021198 -61064334 + AT_rich Low_complexity Low_complexity 1 39 0 1115 139 0 0 chr5 142021747 142021905 -61063627 + AluSq SINE Alu 130 287 -26 234 315 0 0 chr5 142021943 142022086 -61063446 + (TA)n Simple_repeat Simple_repeat 2 144 0 721 311 0 0 chr5 142022086 142022263 -61063269 + (CATG)n Simple_repeat Simple_repeat 4 180 0 228 338 0 0 chr5 142022264 142022421 -61063111 + (TATG)n Simple_repeat Simple_repeat 2 158 0 422 291 0 53 chr5 142022434 142022623 -61062909 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 546 246 0 0 chr5 142022634 142022801 -61062731 + (TA)n Simple_repeat Simple_repeat 2 168 0 832 252 18 14 chr5 142022818 142023036 -61062496 + MER20 DNA MER1_type 1 219 0 518 334 51 62 chr5 142023277 142023410 -61062122 - L2 LINE L2 -825 2489 2356 2225 130 120 5 chr5 142023410 142023794 -61061738 + MSTA LTR MaLR 1 428 0 518 334 51 62 chr5 142023794 142024130 -61061402 - L2 LINE L2 -958 2356 2025 2826 42 0 0 chr5 142024133 142024467 -61061065 + L1PA4 LINE L1 5683 6016 -139 194 154 0 0 chr5 142024512 142024538 -61060994 + T-rich Low_complexity Low_complexity 1 26 0 604 231 3 142 chr5 142024649 142024965 -61060567 + MLT2B1 LTR ERVL 152 423 -97 456 204 0 164 chr5 142024941 142025161 -61060371 + MLT2B1 LTR ERVL 336 519 -1 * 382 322 100 70 chr5 142025170 142025704 -61059828 + L2 LINE L2 2757 3301 -12 335 239 138 9 chr5 142025762 142025871 -61059661 - MIR SINE MIR -75 187 65 249 156 0 0 chr5 142026330 142026375 -61059157 - L1PA15 LINE L1 -134 6031 5987 230 352 56 0 chr5 142026435 142026543 -61058989 - MIR SINE MIR 0 262 149 182 272 40 72 chr5 142026573 142026682 -61058850 + MIR SINE MIR 140 247 -15 2026 136 0 11 chr5 142026682 142026996 -61058536 - AluSx SINE Alu 0 311 1 182 272 40 72 chr5 142026996 142027010 -61058522 + MIR SINE MIR 247 260 -2 551 103 0 11 chr5 142027376 142027463 -61058069 - L1PA8 LINE L1 -1 6171 6086 1016 124 37 106 chr5 142027563 142027781 -61057751 - LTR23 LTR ERV1 -234 203 1 3961 204 31 37 chr5 142027854 142028671 -61056861 + MER21B LTR ERV1 3 814 -49 398 92 0 15 chr5 142028702 142028767 -61056765 + (TCTCC)n Simple_repeat Simple_repeat 5 68 0 190 323 108 46 chr5 142029577 142029656 -61055876 + L2 LINE L2 3105 3178 -135 2091 92 4 0 chr5 142029656 142029929 -61055603 - AluSx SINE Alu -14 298 25 190 323 108 46 chr5 142029929 142030044 -61055488 + L2 LINE L2 3178 3311 -2 511 225 0 8 chr5 142030637 142030757 -61054775 + L1MB4 LINE L1 5134 5252 -894 5385 129 22 10 chr5 142030759 142031648 -61053884 + L1PA5 LINE L1 5255 6154 0 2183 192 33 6 chr5 142031648 142032132 -61053400 + L1MB4 LINE L1 5490 5986 -194 515 288 83 15 chr5 142032279 142032484 -61053048 - MER20 DNA MER1_type 0 219 1 429 68 89 27 chr5 142032535 142032681 -61052851 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 194 62 31 0 chr5 142034399 142034431 -61051101 + (TA)n Simple_repeat Simple_repeat 2 34 0 1924 132 0 27 chr5 142034461 142034756 -61050776 + AluSx SINE Alu 1 287 -25 600 123 0 0 chr5 142034872 142034986 -61050546 + (TG)n Simple_repeat Simple_repeat 2 115 0 22 35 0 0 chr5 142035185 142035214 -61050318 + AT_rich Low_complexity Low_complexity 1 29 0 1415 345 43 26 chr5 142035810 142036714 -61048818 - L1PA12 LINE L1 -5512 2069 1151 23 0 0 0 chr5 142036744 142036767 -61048765 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr5 142037844 142037886 -61047646 + AT_rich Low_complexity Low_complexity 1 42 0 1046 334 162 35 chr5 142038510 142039695 -61045837 - L2 LINE L2 -39 3274 1933 570 261 185 0 chr5 142040557 142040752 -61044780 + MIR SINE MIR 3 233 -29 347 87 16 43 chr5 142041125 142041193 -61044339 - L1P4 LINE L1 -546 5620 5558 * 1315 131 2 1 chr5 142041191 142041404 -61044128 + L1MC/D LINE L1 5600 5811 -361 2194 139 8 3 chr5 142041428 142041787 -61043745 + L1PB1 LINE L1 5783 6143 -8 198 209 0 0 chr5 142041883 142041926 -61043606 + (TATG)n Simple_repeat Simple_repeat 2 44 0 233 91 45 0 chr5 142041932 142041976 -61043556 - LTR66 LTR ERVL -171 439 394 724 254 67 33 chr5 142244701 142244941 -60840591 - MIR SINE MIR 0 262 15 29 47 0 0 chr5 142246001 142246044 -60839488 + AT_rich Low_complexity Low_complexity 1 43 0 2261 182 97 40 chr5 142246424 142247024 -60838508 + MER92B LTR ERV1 3 636 0 292 282 78 10 chr5 142248282 142248385 -60837147 - L2 LINE L2 0 3272 3163 818 128 342 73 chr5 142248404 142248638 -60836894 - AluJo SINE Alu -5 297 1 230 225 115 88 chr5 142249085 142249267 -60836265 - L2 LINE L2 -3 3310 3124 348 318 73 7 chr5 142250168 142250319 -60835213 - MIR SINE MIR -2 260 100 18646 133 11 91 chr5 142250472 142254571 -60830961 - L1P LINE L1 -2363 3783 12 1563 136 178 6 chr5 142254581 142254912 -60830620 - MSTA LTR MaLR -39 389 2 442 247 174 17 chr5 142255168 142255403 -60830129 + L1ME LINE L1 2384 2655 -3491 * 3080 247 65 62 chr5 142255398 142256953 -60828579 + L1ME LINE L1 3458 5016 -1130 1057 299 72 28 chr5 142257028 142257486 -60828046 + MLT1G1 LTR MaLR 118 595 0 2053 149 13 46 chr5 142257545 142257933 -60827599 + THE1C LTR MaLR 1 375 0 10531 115 9 30 chr5 142257933 142259547 -60825985 + THE1C-int LTR MaLR 1 1580 0 540 133 9 80 chr5 142259547 142259660 -60825872 + THE1C LTR MaLR 1 105 -270 2184 139 16 29 chr5 142259666 142260046 -60825486 + THE1C LTR MaLR 1 375 0 1479 224 56 30 chr5 142260048 142260656 -60824876 + L1ME LINE L1 5074 5691 -473 330 286 30 48 chr5 142260769 142260937 -60824595 - ERVL LTR ERVL -1178 4586 4422 194 277 10 109 chr5 142262812 142262913 -60822619 - MER5A DNA MER1_type -87 102 12 246 395 66 25 chr5 142262983 142263226 -60822306 + L2 LINE L2 2807 3059 -213 322 262 9 28 chr5 142263298 142263405 -60822127 - MER102b DNA MER1_type -6 335 231 540 249 122 6 chr5 142263646 142263827 -60821705 + LTR33 LTR ERVL 130 331 -190 2805 179 35 19 chr5 142263867 142263903 -60821629 - MLT2B3 LTR ERVL -4 550 516 194 0 39 0 chr5 142263903 142263929 -60821603 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 2805 179 35 19 chr5 142263929 142264433 -60821099 - MLT2B3 LTR ERVL -38 516 1 11599 161 19 25 chr5 142264433 142266228 -60819304 - ERVL-B3 LTR ERVL -7 5757 3977 1737 199 3 13 chr5 142266228 142266535 -60818997 - AluJb SINE Alu -8 304 1 11599 161 19 25 chr5 142266535 142266983 -60818549 - ERVL-B3 LTR ERVL -1787 3977 3528 2125 159 19 14 chr5 142266973 142267338 -60818194 + ERVL LTR ERVL 3166 3532 -2232 * 2527 157 12 37 chr5 142267745 142268237 -60817295 - ERVL LTR ERVL -1268 4496 4017 721 146 0 0 chr5 142268370 142268473 -60817059 + AluJb SINE Alu 3 105 -207 1656 82 0 8 chr5 142268482 142268725 -60816807 - LTR7 LTR ERV1 -8 442 202 1449 97 0 133 chr5 142268725 142269056 -60816476 - HERVH LTR ERV1 -5736 1977 1691 1155 113 4 42 chr5 142269084 142269324 -60816208 - LTR7 LTR ERV1 -2 448 218 262 316 60 8 chr5 142269684 142269817 -60815715 - MIR3 SINE MIR -35 173 34 28 29 0 0 chr5 142270069 142270104 -60815428 + AT_rich Low_complexity Low_complexity 1 35 0 513 273 20 66 chr5 142270365 142270563 -60814969 + MIR SINE MIR 18 206 -56 298 299 132 29 chr5 142270948 142271122 -60814410 + MIR SINE MIR 20 211 -51 180 0 0 0 chr5 142271964 142271984 -60813548 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 24 53 0 0 chr5 142272214 142272252 -60813280 + AT_rich Low_complexity Low_complexity 1 38 0 243 0 0 0 chr5 142272997 142273024 -60812508 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 584 336 232 15 chr5 142273155 142273965 -60811567 + L3 LINE CR1 92 1156 -421 22 35 0 0 chr5 142274419 142274448 -60811084 + AT_rich Low_complexity Low_complexity 1 29 0 759 120 8 23 chr5 142275308 142275465 -60810067 + FLAM_C SINE Alu 13 167 0 1269 275 54 22 chr5 142276026 142276713 -60808819 - L1ME3A LINE L1 -208 5962 5254 229 315 79 32 chr5 142276954 142277459 -60808073 - L1ME3A LINE L1 -2526 3620 3092 21 71 0 0 chr5 142277528 142277570 -60807962 + AT_rich Low_complexity Low_complexity 1 42 0 604 346 118 11 chr5 142277831 142278103 -60807429 + L2 LINE L2 189 489 -2825 633 110 0 0 chr5 142278125 142278225 -60807307 + (TCCA)n Simple_repeat Simple_repeat 1 100 0 22 0 0 0 chr5 142278994 142279016 -60806516 + AT_rich Low_complexity Low_complexity 1 22 0 1148 195 8 16 chr5 142279022 142279279 -60806253 - L1MB1 LINE L1 -2 6166 5912 327 271 86 33 chr5 142279745 142279896 -60805636 - MIR SINE MIR -30 232 74 1191 226 123 70 chr5 142280048 142280109 -60805423 + MLT1H1 LTR MaLR 1 57 -498 2350 114 87 22 chr5 142280109 142280511 -60805021 - MSTA LTR MaLR 0 428 1 1191 226 123 70 chr5 142280511 142280976 -60804556 + MLT1H1 LTR MaLR 57 555 0 209 318 86 41 chr5 142281833 142282053 -60803479 + L2 LINE L2 2829 3058 -214 881 242 126 3 chr5 142282224 142282540 -60802992 - LTR50 LTR ERVL 0 795 353 460 231 96 19 chr5 142282579 142282735 -60802797 - LTR50 LTR ERVL -509 286 119 315 305 76 9 chr5 142282977 142283082 -60802450 + MIR SINE MIR 25 136 -126 380 292 195 15 chr5 142284343 142284538 -60800994 + MIR SINE MIR 31 260 -2 5115 137 61 6 chr5 142287816 142288672 -60796860 - MER4D LTR ERV1 0 903 1 666 229 95 28 chr5 142288739 142289031 -60796501 + MSTD LTR MaLR 1 320 -45 4792 235 82 32 chr5 142289049 142290464 -60795068 + MSTD-int LTR MaLR 2 1487 -248 320 109 0 0 chr5 142290464 142290510 -60795022 + MSTD LTR MaLR 351 396 0 288 271 8 98 chr5 142290717 142290822 -60794710 + MIR SINE MIR 17 111 -151 547 297 16 11 chr5 142290822 142291007 -60794525 + MER5A DNA MER1_type 3 188 -1 288 271 8 98 chr5 142291007 142291023 -60794509 + MIR SINE MIR 111 127 -135 354 264 192 12 chr5 142291274 142291441 -60794091 + MIR SINE MIR 32 228 -34 234 294 15 0 chr5 142291552 142291620 -60793912 + L2 LINE L2 2987 3055 -217 399 73 0 0 chr5 142291664 142291719 -60793813 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 420 266 26 73 chr5 142293207 142293440 -60792092 - MER102b DNA MER1_type -12 329 108 315 211 14 0 chr5 142293463 142293534 -60791998 - L1MD3 LINE L1 -20 7975 7904 1387 222 76 47 chr5 142293534 142293962 -60791570 - MLT1C LTR MaLR 0 467 24 1666 151 107 20 chr5 142293962 142294307 -60791225 - THE1C LTR MaLR 0 375 1 1387 222 76 47 chr5 142294307 142294328 -60791204 - MLT1C LTR MaLR -443 24 5 229 269 76 0 chr5 142294331 142294450 -60791082 - L1MD3 LINE L1 -86 7909 7782 769 179 14 179 chr5 142294450 142294746 -60790786 + MER77 LTR ERV1 45 291 -314 1278 231 46 46 chr5 142294814 142295230 -60790302 - L1MC4a LINE L1 -210 7598 7183 258 158 0 0 chr5 142297015 142297072 -60788460 + LTR66 LTR ERVL 382 438 -172 * 263 111 0 0 chr5 142297025 142297079 -60788453 - LTR66 LTR ERVL -163 447 394 189 0 0 0 chr5 142297079 142297100 -60788432 + (CA)n Simple_repeat Simple_repeat 2 22 0 2363 170 60 0 chr5 142297414 142297849 -60787683 + LOR1b LTR ERV1 1 461 0 1670 211 0 16 chr5 142298445 142298757 -60786775 - AluJb SINE Alu -5 307 1 460 239 0 69 chr5 142298936 142299066 -60786466 + MIR SINE MIR 137 257 -5 1763 160 0 49 chr5 142299160 142299496 -60786036 + AluSx SINE Alu 1 312 0 1850 94 0 0 chr5 142299538 142299771 -60785761 + AluSc SINE Alu 1 233 -76 1101 301 23 17 chr5 142299779 142300125 -60785407 + L2 LINE L2 300 647 -2667 468 297 63 8 chr5 142300148 142300387 -60785145 - MLT1J1 LTR MaLR -42 404 153 819 162 0 7 chr5 142301324 142301460 -60784072 - FLAM_C SINE Alu -8 135 1 2400 88 3 0 chr5 142301755 142302060 -60783472 - AluSp SINE Alu -7 306 1 539 306 55 21 chr5 142302167 142302402 -60783130 + L2 LINE L2 2823 3065 -248 515 304 126 0 chr5 142302418 142302665 -60782867 - L1MC4a LINE L1 -888 6920 6643 345 283 200 7 chr5 142302712 142302857 -60782675 - L1MC4a LINE L1 -1636 6172 6000 1000 275 171 15 chr5 142302867 142303416 -60782116 - L1MC4a LINE L1 -1750 6058 5424 908 201 15 140 chr5 142303416 142303809 -60781723 + MER2 DNA MER2_type 1 344 -1 330 206 61 61 chr5 142303810 142303975 -60781557 - L1MC4a LINE L1 -2388 5420 5256 894 343 49 25 chr5 142303989 142304621 -60780911 - L1MC4a LINE L1 -906 5240 4594 251 316 26 0 chr5 142305693 142305769 -60779763 - L2 LINE L2 -2 3270 3193 250 272 68 19 chr5 142305859 142305962 -60779570 - MIR SINE MIR -50 212 105 2200 120 0 0 chr5 142306465 142306773 -60778759 + AluSx SINE Alu 1 308 -4 306 292 36 7 chr5 142307349 142307486 -60778046 + MLT1J2 LTR MaLR 3 143 -307 254 273 164 0 chr5 142307521 142307631 -60777901 + MLT1J2 LTR MaLR 202 329 -121 400 324 116 42 chr5 142308011 142308457 -60777075 - L2 LINE L2 0 3313 2764 2164 135 0 0 chr5 142308457 142308754 -60776778 + AluSx SINE Alu 1 297 -15 400 324 116 42 chr5 142308754 142309042 -60776490 - L2 LINE L2 -549 2764 2499 688 89 0 0 chr5 142310209 142310310 -60775222 - AluY SINE Alu -2 309 209 2144 118 50 16 chr5 142310492 142310855 -60774677 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr5 142311093 142311114 -60774418 + AT_rich Low_complexity Low_complexity 1 21 0 1504 168 32 14 chr5 142311537 142311817 -60773715 + AluJb SINE Alu 22 306 -6 30 59 0 0 chr5 142311994 142312045 -60773487 + AT_rich Low_complexity Low_complexity 1 51 0 1161 137 54 54 chr5 142312115 142312356 -60773176 - THE1B LTR MaLR 0 364 124 2506 75 28 3 chr5 142312358 142312717 -60772815 - THE1B-int LTR MaLR -1212 368 1 1844 133 44 94 chr5 142312717 142313100 -60772432 - THE1B LTR MaLR 0 364 1 26 30 0 0 chr5 142313316 142313349 -60772183 + AT_rich Low_complexity Low_complexity 1 33 0 219 69 0 0 chr5 142314716 142314745 -60770787 + (A)n Simple_repeat Simple_repeat 1 29 0 5007 102 4 0 chr5 142315385 142316093 -60769439 - L1PA8 LINE L1 0 6172 5462 10878 114 43 21 chr5 142316094 142317978 -60767554 + L1P LINE L1 3449 5374 -772 5077 123 7 15 chr5 142318039 142319446 -60766086 + HERVH LTR ERV1 1393 2830 -4883 7496 141 17 9 chr5 142319446 142321283 -60764249 + HERVH LTR ERV1 3357 5149 -2287 2105 164 17 5 chr5 142321274 142321696 -60763836 + HERVH LTR ERV1 5590 6016 -1697 * 3147 104 66 11 chr5 142321689 142321726 -60763806 + HERVH LTR ERV1 7157 7191 -522 373 0 58 0 chr5 142321726 142321778 -60763754 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 3147 104 66 11 chr5 142321778 142322268 -60763264 + HERVH LTR ERV1 7191 7713 0 2411 126 60 19 chr5 142322268 142322698 -60762834 + LTR7 LTR ERV1 1 448 -2 731 249 165 7 chr5 142324493 142324790 -60760742 + L2 LINE L2 2632 2975 -339 853 203 31 16 chr5 142324897 142325089 -60760443 - AluJb SINE Alu 0 312 118 721 214 14 7 chr5 142325089 142325234 -60760298 + L2 LINE L2 3168 3313 0 939 220 48 15 chr5 142325260 142325528 -60760004 - L1M4 LINE L1 -1298 4848 4572 2113 267 21 24 chr5 142325546 142326268 -60759264 + L1ME1 LINE L1 5442 6161 -5 977 232 15 17 chr5 142326269 142326569 -60758963 + L1ME1 LINE L1 5858 6153 -13 1296 216 45 22 chr5 142326958 142327315 -60758217 + L1ME2 LINE L1 5734 6098 -66 23 0 0 0 chr5 142327318 142327341 -60758191 + AT_rich Low_complexity Low_complexity 1 23 0 315 268 145 39 chr5 142328124 142328820 -60756712 + L1ME LINE L1 1798 2584 -4137 318 26 0 0 chr5 142329043 142329082 -60756450 + (CA)n Simple_repeat Simple_repeat 2 40 0 2431 54 17 0 chr5 142329119 142329415 -60756117 - AluY SINE Alu -10 301 1 748 271 143 3 chr5 142329416 142329759 -60755773 + L1ME LINE L1 5661 6041 -523 207 0 0 0 chr5 142329759 142329782 -60755750 + (TG)n Simple_repeat Simple_repeat 2 24 0 238 222 19 0 chr5 142329826 142329880 -60755652 - MER45 DNA AcHobo -1 1580 1526 192 125 0 0 chr5 142330024 142330056 -60755476 + (CA)n Simple_repeat Simple_repeat 1 32 0 2229 97 0 10 chr5 142330369 142330687 -60754845 + AluSq SINE Alu 1 315 0 388 284 236 17 chr5 142331150 142331493 -60754039 + L1MC3 LINE L1 3577 3989 -2157 400 322 42 33 chr5 142331563 142331821 -60753711 + L1MC3 LINE L1 5587 5804 -360 2623 24 0 0 chr5 142331892 142332185 -60753347 - AluY SINE Alu -18 293 1 24 53 0 0 chr5 142332236 142332274 -60753258 + AT_rich Low_complexity Low_complexity 1 38 0 297 0 0 0 chr5 142332627 142332660 -60752872 + (TG)n Simple_repeat Simple_repeat 2 34 0 322 269 11 75 chr5 142333081 142333174 -60752358 - MIR SINE MIR -32 176 89 1250 121 0 0 chr5 142333175 142333357 -60752175 - LTR8 LTR ERV1 0 691 510 1869 163 29 102 chr5 142333633 142334184 -60751348 - LTR8 LTR ERV1 -180 511 1 365 233 58 12 chr5 142334185 142334271 -60751261 - MIR SINE MIR -172 90 1 3721 188 35 7 chr5 142334756 142335468 -60750064 + MER44D DNA MER2_type 2 605 0 474 289 29 49 chr5 142336705 142336909 -60748623 - MIR SINE MIR 0 262 63 339 240 19 58 chr5 142336998 142337102 -60748430 - L2 LINE L2 0 3272 3173 281 319 52 32 chr5 142337115 142337366 -60748166 + L2 LINE L2 2828 3083 -189 363 240 0 0 chr5 142337397 142337468 -60748064 + MER58 DNA MER1_type 198 268 -73 365 182 0 26 chr5 142337468 142337545 -60747987 - MER58 DNA MER1_type -1 2419 2345 207 0 0 0 chr5 142337805 142337828 -60747704 + (TC)n Simple_repeat Simple_repeat 1 23 0 217 374 61 0 chr5 142337919 142338018 -60747514 - L2 LINE L2 0 3272 3168 1531 203 0 54 chr5 142339047 142339362 -60746170 - AluJo SINE Alu -14 298 1 457 256 0 68 chr5 142339778 142339911 -60745621 - L2 LINE L2 0 3313 3190 662 302 36 36 chr5 142340119 142340371 -60745161 + MIR SINE MIR 1 252 -10 316 286 8 30 chr5 142340576 142340709 -60744823 + LTR67 LTR ERVL 428 557 0 398 145 26 0 chr5 142341405 142341481 -60744051 - MLT1D LTR MaLR 0 505 428 * 464 205 11 1 chr5 142341471 142341575 -60743957 - MLT1D LTR MaLR -403 102 9 318 406 6 38 chr5 142343227 142343307 -60742225 + L2 LINE L2 3117 3191 -81 1428 238 52 18 chr5 142343307 142343690 -60741842 - MSTD LTR MaLR 0 396 1 318 406 6 38 chr5 142343690 142343769 -60741763 + L2 LINE L2 3191 3271 -1 204 264 19 0 chr5 142343922 142343975 -60741557 - MIR SINE MIR -57 151 98 195 270 27 68 chr5 142344673 142344747 -60740785 - L3 LINE CR1 0 1577 1507 22 56 0 0 chr5 142344774 142344810 -60740722 + AT_rich Low_complexity Low_complexity 1 36 0 7211 188 42 6 chr5 142345056 142347324 -60738208 + L1PA14 LINE L1 3863 6161 0 2359 75 0 30 chr5 142347335 142347640 -60737892 + AluY SINE Alu 1 296 -15 2465 116 26 5 chr5 142347644 142348025 -60737507 + L1PA15 LINE L1 5776 6164 -1 2358 102 0 0 chr5 142348468 142348773 -60736759 - AluSq SINE Alu -8 305 1 292 198 10 21 chr5 142349154 142349250 -60736282 + (TGG)n Simple_repeat Simple_repeat 3 97 0 1017 211 36 32 chr5 142350927 142351178 -60734354 - MIR SINE MIR -1 261 10 428 239 44 0 chr5 142352035 142352148 -60733384 + MIR SINE MIR 139 256 -6 543 315 9 28 chr5 142353758 142353974 -60731558 + MIR SINE MIR 2 213 -49 519 199 85 6 chr5 142354158 142354336 -60731196 + MLT1A1 LTR MaLR 123 359 -6 712 311 150 34 chr5 142354384 142355258 -60730274 + L2 LINE L2 789 3313 0 2618 39 0 6 chr5 142355714 142356025 -60729507 + AluY SINE Alu 1 309 -2 281 236 29 79 chr5 142356062 142356202 -60729330 - L1MC4a LINE L1 -1922 5886 5754 538 307 52 9 chr5 142356965 142357177 -60728355 + MIR SINE MIR 5 225 -37 679 131 0 0 chr5 142357230 142357329 -60728203 - FLAM_A SINE Alu -26 116 18 25 0 0 0 chr5 142357351 142357376 -60728156 + AT_rich Low_complexity Low_complexity 1 25 0 408 262 65 0 chr5 142358358 142358465 -60727067 - MER81 DNA DNA 0 114 1 365 361 105 23 chr5 142358550 142358769 -60726763 - MIR SINE MIR -24 238 2 650 152 25 24 chr5 142360917 142361068 -60724464 - L1MA6 LINE L1 -41 6259 6119 21 0 0 0 chr5 142361068 142361089 -60724443 + AT_rich Low_complexity Low_complexity 1 21 0 244 306 61 10 chr5 142361364 142361462 -60724070 + MIR SINE MIR 40 142 -120 349 256 61 55 chr5 142361951 142362115 -60723417 - L2 LINE L2 0 3313 3149 276 324 188 55 chr5 142363653 142364020 -60721512 - L2 LINE L2 -475 2839 2424 384 273 110 34 chr5 142371497 142371706 -60713826 + L1M4 LINE L1 3002 3226 -2920 486 33 0 0 chr5 142371893 142371953 -60713579 + (TA)n Simple_repeat Simple_repeat 1 60 0 2598 81 57 5 chr5 142371953 142372323 -60713209 - MLT2A1 LTR ERVL -55 389 1 325 262 48 0 chr5 142372323 142372407 -60713125 - L1MC4 LINE L1 -1340 6702 6615 383 365 25 10 chr5 142372447 142372644 -60712888 + L1M4 LINE L1 4170 4369 -1777 303 259 80 25 chr5 142372659 142372821 -60712711 + L1M4 LINE L1 4530 4700 -1446 2302 113 3 0 chr5 142372930 142373240 -60712292 + AluSx SINE Alu 1 311 -1 2234 176 14 18 chr5 142373762 142373818 -60711714 - L1MD1 LINE L1 -19 6617 6562 2552 102 31 3 chr5 142373818 142374172 -60711360 - THE1B LTR MaLR 0 364 1 2234 176 14 18 chr5 142374172 142374553 -60710979 - L1MD1 LINE L1 -74 6562 6182 1633 240 30 56 chr5 142374563 142375015 -60710517 - L1MD1 LINE L1 -1091 5449 5018 2148 144 36 71 chr5 142375015 142375189 -60710343 - Tigger2a DNA MER2_type -2274 434 255 2071 104 14 0 chr5 142375189 142375467 -60710065 - AluSx SINE Alu -19 293 12 2148 144 36 71 chr5 142375467 142375742 -60709790 - Tigger2a DNA MER2_type -2453 255 1 1633 240 30 56 chr5 142375742 142375947 -60709585 - L1MD1 LINE L1 -1522 5018 4809 1925 247 32 10 chr5 142375994 142376590 -60708942 - L1MD1 LINE L1 -3089 3451 2843 1606 227 98 102 chr5 142376591 142376666 -60708866 - L1MD1 LINE L1 -5410 1130 1056 1785 158 61 0 chr5 142376666 142376945 -60708587 + AluSx SINE Alu 4 299 -13 2363 92 0 3 chr5 142376951 142377257 -60708275 + AluSc SINE Alu 1 305 -4 1606 227 98 102 chr5 142377257 142378092 -60707440 - L1MD1 LINE L1 -5489 1051 44 689 251 115 105 chr5 142379329 142380071 -60705461 - HAL1 LINE L1 -651 1856 1108 1185 295 124 29 chr5 142380103 142380625 -60704907 - L2 LINE L2 -1009 2305 1734 7210 45 2 4 chr5 142381356 142382644 -60702888 - L1PA5 LINE L1 0 6154 4877 2703 50 0 0 chr5 142382644 142382984 -60702548 + L1PA5 LINE L1 4516 4855 -1291 208 216 57 40 chr5 142383057 142383147 -60702385 + MIR SINE MIR 91 177 -31 297 300 16 68 chr5 142383287 142383525 -60702007 + L2 LINE L2 2778 2999 -273 1045 242 28 8 chr5 142384108 142384356 -60701176 - MLT1C LTR MaLR 0 467 215 1432 276 71 48 chr5 142384709 142385580 -60699952 + L1ME LINE L1 328 1218 -4901 655 324 34 10 chr5 142385570 142385866 -60699666 + L1ME LINE L1 5396 5698 -447 * 796 230 40 37 chr5 142385885 142386217 -60699315 + MLT1A1 LTR MaLR 1 396 0 244 217 14 0 chr5 142386217 142386286 -60699246 + L1ME LINE L1 5731 5800 -345 3917 178 141 36 chr5 142386292 142387329 -60698203 - MER52C LTR ERV1 0 1278 132 232 231 0 0 chr5 142387329 142387368 -60698164 + MER52A LTR ERV1 1 39 -1716 222 258 153 61 chr5 142388329 142388492 -60697040 + MIR SINE MIR 35 212 -50 609 260 34 48 chr5 142388928 142389136 -60696396 - L2 LINE L2 -1 3312 3108 428 337 69 34 chr5 142389153 142389560 -60695972 + L1MC4a LINE L1 5665 6085 -1723 264 242 60 49 chr5 142390014 142390187 -60695345 + L1M2 LINE L1 5294 5466 -742 248 290 97 32 chr5 142390385 142390540 -60694992 + L1MCc LINE L1 1186 1350 -5073 382 239 30 0 chr5 142390564 142390698 -60694834 + L1MCc LINE L1 2899 3036 -4086 5078 214 28 22 chr5 142390706 142392040 -60693492 - L1MCa LINE L1 -1162 5264 3923 8041 184 77 61 chr5 142392046 142393110 -60692422 - L1MCa LINE L1 -2574 3852 2806 1465 183 0 38 chr5 142393110 142393399 -60692133 - AluJb SINE Alu -3 309 32 8041 184 77 61 chr5 142393399 142393607 -60691925 - L1MCa LINE L1 -3620 2806 2603 1694 169 37 10 chr5 142393607 142393903 -60691629 - AluJb SINE Alu -8 304 1 8041 184 77 61 chr5 142393903 142394479 -60691053 - L1MCa LINE L1 -3823 2603 2037 2089 134 0 7 chr5 142394479 142394785 -60690747 + AluSx SINE Alu 1 304 -8 8041 184 77 61 chr5 142394785 142396697 -60688835 - L1MCa LINE L1 -4389 2037 21 591 258 94 8 chr5 142396691 142396935 -60688597 + L1MCc LINE L1 3780 4044 -2897 * 318 269 40 96 chr5 142397029 142397352 -60688180 + L1MCc LINE L1 4252 4556 -2385 1593 179 7 33 chr5 142397841 142398143 -60687389 - AluJb SINE Alu -6 306 13 959 114 0 6 chr5 142398552 142398710 -60686822 + (TTCC)n Simple_repeat Simple_repeat 2 158 0 443 284 37 37 chr5 142398725 142398915 -60686617 - L2 LINE L2 -2 3311 3122 370 325 84 26 chr5 142400708 142401019 -60684513 - HAL1b LINE L1 -567 781 453 4819 216 65 63 chr5 142403674 142406593 -60678939 + L1MB8 LINE L1 3300 6165 -13 7802 18 0 0 chr5 142406750 142407917 -60677615 - L1PA3 LINE L1 0 6155 4989 1928 195 128 0 chr5 142408469 142408905 -60676627 + MER89 LTR ERV1 58 549 -10 571 323 56 5 chr5 142409212 142409410 -60676122 - MIR SINE MIR -54 208 1 180 293 103 0 chr5 142409463 142409521 -60676011 - L2 LINE L2 -51 3262 3199 237 273 182 10 chr5 142410110 142410209 -60675323 + MIR3 SINE MIR 87 202 -6 4215 81 0 4 chr5 142410654 142411210 -60674322 + MER41A LTR ERV1 1 554 0 27 0 0 0 chr5 142411573 142411600 -60673932 + AT_rich Low_complexity Low_complexity 1 27 0 321 171 26 0 chr5 142411694 142411770 -60673762 + L1MA8 LINE L1 6209 6286 -5 629 224 45 19 chr5 142412620 142412776 -60672756 + MIR SINE MIR 69 228 -34 1943 110 58 3 chr5 142414312 142414604 -60670928 + AluSq SINE Alu 1 308 -5 288 53 0 0 chr5 142414773 142414811 -60670721 + (TG)n Simple_repeat Simple_repeat 2 39 0 2046 102 10 45 chr5 142415788 142416102 -60669430 + AluSq SINE Alu 11 313 0 567 78 0 0 chr5 142416102 142416179 -60669353 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 611 289 180 44 chr5 142416514 142416926 -60668606 - L2 LINE L2 -5 3308 2841 208 235 25 62 chr5 142416993 142417074 -60668458 - MER91B DNA MER1_type -31 159 82 250 234 31 16 chr5 142417107 142417171 -60668361 - MER91B DNA MER1_type -63 127 63 29 28 0 0 chr5 142418004 142418040 -60667492 + AT_rich Low_complexity Low_complexity 1 36 0 6368 124 32 21 chr5 142418460 142419514 -60666018 + Tigger3b DNA MER2_type 2 1067 -164 2272 127 9 21 chr5 142419514 142419854 -60665678 + MER1B DNA MER1_type 1 336 -3 1026 172 11 11 chr5 142419854 142420028 -60665504 + Tigger3b DNA MER2_type 1067 1240 -1 2748 16 0 0 chr5 142420390 142420695 -60664837 + AluYa5 SINE Alu 1 305 -6 317 355 70 6 chr5 142420920 142421092 -60664440 - MIR SINE MIR -3 259 77 23 33 0 0 chr5 142421468 142421498 -60664034 + AT_rich Low_complexity Low_complexity 1 30 0 254 273 58 88 chr5 142422494 142422643 -60662889 + MLT1K LTR MaLR 143 300 -288 357 244 96 57 chr5 142422742 142422951 -60662581 + MLT1K LTR MaLR 357 573 -15 255 61 0 0 chr5 142423951 142423984 -60661548 + (ATG)n Simple_repeat Simple_repeat 1 33 0 233 236 0 28 chr5 142424739 142424811 -60660721 + A-rich Low_complexity Low_complexity 5 74 0 207 0 0 0 chr5 142424967 142424990 -60660542 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 442 250 40 0 chr5 142425017 142425117 -60660415 + MER91C DNA MER1_type 27 130 -10 260 269 13 26 chr5 142425553 142425631 -60659901 + MIR SINE MIR 52 128 -134 1335 141 45 5 chr5 142426169 142426389 -60659143 + MER30 DNA MER1_type 2 230 0 309 243 0 0 chr5 142426667 142426741 -60658791 - MIR SINE MIR -93 169 96 287 272 58 29 chr5 142427106 142427209 -60658323 - L2 LINE L2 -8 3305 3200 423 320 107 60 chr5 142427462 142428078 -60657454 - L2 LINE L2 -445 2869 2225 659 185 192 13 chr5 142428185 142428336 -60657196 + MER5A DNA MER1_type 1 178 -11 236 348 89 0 chr5 142432157 142432269 -60653263 + L2 LINE L2 3150 3271 -1 15993 154 23 11 chr5 142432320 142439429 -60646103 + L1MA1 LINE L1 12 7717 -4 1640 168 2 111 chr5 142439456 142439862 -60645670 - MLT1B LTR MaLR -28 362 1 296 264 55 11 chr5 142441274 142441365 -60644167 - MER112 DNA MER1_type -13 247 153 373 360 106 35 chr5 142441658 142441931 -60643601 - L2 LINE L2 -6 3266 3014 643 266 120 61 chr5 142441931 142442423 -60643109 - LTR33A LTR ERVL -2 521 1 373 360 106 35 chr5 142442423 142442645 -60642887 - L2 LINE L2 -258 3014 2735 279 0 0 0 chr5 142442652 142442683 -60642849 + (TG)n Simple_repeat Simple_repeat 2 32 0 232 171 0 92 chr5 142442899 142442975 -60642557 - HAL1 LINE L1 -191 2316 2248 2299 85 10 0 chr5 142444507 142444801 -60640731 - AluSp SINE Alu -16 297 1 5880 126 15 43 chr5 142445173 142446621 -60638911 - L1PA13 LINE L1 0 6163 4775 2222 143 36 14 chr5 142446621 142446977 -60638555 - THE1B LTR MaLR 0 364 1 5880 126 15 43 chr5 142446977 142447420 -60638112 - L1PA13 LINE L1 -1388 4775 4321 180 0 0 0 chr5 142447425 142447445 -60638087 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2450 62 7 0 chr5 142447950 142448259 -60637273 - AluY SINE Alu 0 311 1 529 331 65 5 chr5 142448980 142449164 -60636368 - MIR SINE MIR -52 210 16 428 336 8 0 chr5 142449820 142449948 -60635584 + L2 LINE L2 3143 3271 -1 2116 172 14 11 chr5 142449977 142450359 -60635173 + MLT2D LTR ERVL 1 478 -42 547 154 6 24 chr5 142450359 142450528 -60635004 + (TCTA)n Simple_repeat Simple_repeat 2 167 0 23 68 0 0 chr5 142450616 142450660 -60634872 + AT_rich Low_complexity Low_complexity 1 44 0 2108 198 67 19 chr5 142452789 142453269 -60632263 + MLT1D LTR MaLR 3 505 0 307 365 47 34 chr5 142453303 142453407 -60632125 + L1ME LINE L1 5481 5582 -588 1862 124 69 69 chr5 142453407 142453576 -60631956 + THE1B LTR MaLR 1 169 -195 1970 133 25 0 chr5 142453576 142453874 -60631658 + AluSx SINE Alu 1 305 0 1862 124 69 69 chr5 142453874 142454067 -60631465 + THE1B LTR MaLR 168 364 0 307 365 47 34 chr5 142454067 142454355 -60631177 + L1ME LINE L1 5582 5885 -285 679 218 6 6 chr5 142454400 142454556 -60630976 - L1MC4a LINE L1 -796 7012 6857 1308 142 26 0 chr5 142454704 142454936 -60630596 + L1MA5A LINE L1 6055 6292 -5 2646 285 102 20 chr5 142455486 142456697 -60628835 + L2 LINE L2 1978 3280 -33 536 302 77 0 chr5 142458223 142458405 -60627127 + MIR SINE MIR 19 214 -48 389 306 0 34 chr5 142458646 142458793 -60626739 + CT-rich Low_complexity Low_complexity 2 143 0 21 71 0 0 chr5 142459750 142459792 -60625740 + AT_rich Low_complexity Low_complexity 1 42 0 1368 291 101 49 chr5 142459990 142461441 -60624091 - L1MEd LINE L1 -4500 1629 80 3690 169 35 10 chr5 142461441 142461628 -60623904 + L1MB3 LINE L1 5457 5638 -545 2394 159 36 10 chr5 142461628 142462043 -60623489 + MSTB LTR MaLR 1 426 0 3690 169 35 10 chr5 142462043 142462564 -60622968 + L1MB3 LINE L1 5638 6183 0 5213 231 96 42 chr5 142463226 142464936 -60620596 + L1M4b LINE L1 7 1817 -5038 216 0 0 0 chr5 142464936 142464960 -60620572 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5213 231 96 42 chr5 142464960 142465119 -60620413 + L1M4b LINE L1 1817 1966 -4889 27 0 0 0 chr5 142465417 142465444 -60620088 + AT_rich Low_complexity Low_complexity 1 27 0 1928 171 7 0 chr5 142466133 142466443 -60619089 - AluJb SINE Alu 0 312 1 235 353 74 39 chr5 142467110 142467368 -60618164 - L2 LINE L2 -673 2641 2375 2404 185 17 21 chr5 142467414 142467894 -60617638 - MER66A LTR ERV1 0 478 1 186 43 0 0 chr5 142468969 142468992 -60616540 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 6396 138 9 24 chr5 142468992 142469378 -60616154 - L1PB1 LINE L1 -5 6146 5756 1846 122 0 4 chr5 142469378 142469632 -60615900 - AluSq SINE Alu -22 291 39 6396 138 9 24 chr5 142469632 142471267 -60614265 - L1PB1 LINE L1 -395 5756 4157 328 291 112 66 chr5 142472277 142472780 -60612752 - L2 LINE L2 -353 2961 2249 825 266 11 93 chr5 142473117 142473481 -60612051 - L2 LINE L2 -2 3311 2978 394 238 168 0 chr5 142473481 142473624 -60611908 + L1M4b LINE L1 2876 3042 -3917 1769 187 46 5 chr5 142473643 142474033 -60611499 + L1MB7 LINE L1 5706 6111 -73 535 289 95 23 chr5 142474127 142474818 -60610714 + L1MEc LINE L1 900 1676 -4634 496 229 128 14 chr5 142474839 142475057 -60610475 + L1MEd LINE L1 1074 1316 -4889 303 266 35 14 chr5 142475186 142475329 -60610203 + L1MEd LINE L1 1574 1719 -4677 20522 159 36 16 chr5 142476129 142479339 -60606193 - L1MA2 LINE L1 0 7723 4580 1707 167 17 0 chr5 142479339 142479626 -60605906 - AluSx SINE Alu -20 292 1 20522 159 36 16 chr5 142479626 142483970 -60601562 - L1MA2 LINE L1 -3143 4580 13 247 290 0 0 chr5 142484870 142484932 -60600600 + MER94 DNA DNA 1 62 -72 1336 226 70 25 chr5 142485303 142485707 -60599825 + MER114 LTR ERV 36 467 -181 2352 95 0 0 chr5 142485707 142486011 -60599521 - AluSc SINE Alu -5 304 1 1336 226 70 25 chr5 142486011 142486092 -60599440 + MER114 LTR ERV 467 543 -105 22 0 0 0 chr5 142486615 142486637 -60598895 + AT_rich Low_complexity Low_complexity 1 22 0 1549 249 94 10 chr5 142487936 142488438 -60597094 - MLT1H1 LTR MaLR 0 555 12 225 216 84 108 chr5 142488636 142488803 -60596729 - L2 LINE L2 -13 3300 3138 202 211 0 0 chr5 142489202 142489240 -60596292 + (CA)n Simple_repeat Simple_repeat 1 38 0 325 274 20 0 chr5 142490481 142490583 -60594949 - LTR16A LTR ERVL -107 343 240 302 319 9 18 chr5 142490604 142490717 -60594815 - MERVL LTR ERVL -2562 2923 2812 585 269 56 46 chr5 142490809 142491006 -60594526 - MLT1J LTR MaLR -312 199 1 311 230 40 20 chr5 142491006 142491106 -60594426 + HAL1b LINE L1 699 800 -548 776 155 0 0 chr5 142491180 142491296 -60594236 + FLAM_C SINE Alu 1 116 -17 1399 58 0 0 chr5 142491351 142491524 -60594008 - L1PA7 LINE L1 -5 6149 5977 797 309 67 33 chr5 142492800 142493159 -60592373 + L2 LINE L2 2943 3313 0 23 33 0 0 chr5 142493428 142493458 -60592074 + AT_rich Low_complexity Low_complexity 1 30 0 254 298 176 52 chr5 142494400 142494997 -60590535 + L2 LINE L2 1593 2263 -1051 1979 265 126 34 chr5 142495020 142495368 -60590164 + L2 LINE L2 2078 2393 -921 1720 186 23 3 chr5 142495368 142495674 -60589858 - AluJb SINE Alu 0 312 1 1979 265 126 34 chr5 142495674 142496088 -60589444 + L2 LINE L2 2393 2910 -404 751 312 58 53 chr5 142496057 142496471 -60589061 + L2 LINE L2 2818 3233 -80 * 22 0 0 0 chr5 142496645 142496667 -60588865 + AT_rich Low_complexity Low_complexity 1 22 0 237 180 0 0 chr5 142496693 142496743 -60588789 + (TA)n Simple_repeat Simple_repeat 1 50 0 235 341 123 29 chr5 142496857 142496995 -60588537 + L2 LINE L2 2603 2753 -561 6235 87 10 14 chr5 142497805 142499065 -60586467 - L1PA10 LINE L1 -10 6158 4889 388 254 171 28 chr5 142499151 142499368 -60586164 - MARNA DNA Mariner -155 431 184 21 36 0 0 chr5 142502500 142502528 -60583004 + AT_rich Low_complexity Low_complexity 1 28 0 2245 105 3 0 chr5 142502887 142503193 -60582339 + AluSq SINE Alu 1 307 -6 378 0 0 0 chr5 142504400 142504442 -60581090 + (TG)n Simple_repeat Simple_repeat 2 43 0 552 235 121 34 chr5 142504455 142504861 -60580671 - MLT1D LTR MaLR -6 488 1 1208 198 4 25 chr5 142506700 142506943 -60578589 + MER8 DNA MER2_type 2 239 0 384 282 17 34 chr5 142507282 142507399 -60578133 + MIR SINE MIR 1 115 -147 875 162 0 0 chr5 142507584 142507720 -60577812 - MER20 DNA MER1_type -7 212 77 368 235 37 0 chr5 142507755 142507836 -60577696 - MER20 DNA MER1_type -135 84 1 22 0 0 0 chr5 142508691 142508713 -60576819 + AT_rich Low_complexity Low_complexity 1 22 0 3641 207 44 20 chr5 142508901 142510455 -60575077 + L1MB8 LINE L1 4342 5933 -245 355 355 82 4 chr5 142510500 142510768 -60574764 + L2 LINE L2 3012 3300 -13 1145 135 39 0 chr5 142510874 142511082 -60574450 - L1MA8 LINE L1 -10 6281 6066 193 325 288 0 chr5 142511088 142511251 -60574281 - MIR SINE MIR -52 210 1 721 191 22 7 chr5 142511538 142511674 -60573858 - MLT1A1 LTR MaLR -209 156 19 187 261 0 62 chr5 142512226 142512291 -60573241 + L2 LINE L2 3244 3304 -9 857 245 14 23 chr5 142512667 142512883 -60572649 + MLT1J LTR MaLR 1 214 -297 417 237 111 82 chr5 142512973 142513180 -60572352 + MLT1J LTR MaLR 265 477 -34 816 266 44 24 chr5 142513377 142513625 -60571907 + MIR SINE MIR 2 254 -8 186 375 115 0 chr5 142513643 142513747 -60571785 - L2 LINE L2 -8 3264 3149 1979 148 0 0 chr5 142513848 142514155 -60571377 - AluSx SINE Alu 0 307 1 470 275 96 46 chr5 142515080 142515320 -60570212 + MER112 DNA MER1_type 1 252 -4 404 228 0 0 chr5 142517442 142517521 -60568011 - Tigger3(Golem) DNA MER2_type -2 3027 2949 923 188 13 0 chr5 142517675 142517824 -60567708 + FRAM SINE Alu 1 146 -30 385 356 88 42 chr5 142518335 142518619 -60566913 + L2 LINE L2 2976 3272 0 3128 113 55 10 chr5 142518920 142519409 -60566123 - MER9 LTR ERVK 0 511 1 815 149 15 30 chr5 142519458 142519592 -60565940 + FLAM_C SINE Alu 2 133 0 3539 94 6 6 chr5 142519679 142520166 -60565366 + LTR15 LTR ERV1 1 487 -6 2066 129 0 0 chr5 142520224 142520532 -60565000 + AluSx SINE Alu 3 310 0 215 309 64 0 chr5 142520973 142521067 -60564465 - MIR SINE MIR -61 201 102 2719 272 38 23 chr5 142521620 142522456 -60563076 + L1ME1 LINE L1 34 887 -5509 1697 175 0 26 chr5 142522456 142522759 -60562773 + AluJo SINE Alu 5 299 -13 2719 272 38 23 chr5 142522759 142522883 -60562649 + L1ME1 LINE L1 887 1008 -5388 1761 248 67 58 chr5 142522903 142523711 -60561821 + L1ME1 LINE L1 2407 3264 -2951 1388 183 90 11 chr5 142523711 142523990 -60561542 - AluJo SINE Alu 0 302 2 1761 248 67 58 chr5 142523990 142524142 -60561390 + L1ME1 LINE L1 3264 3413 -2802 625 177 0 62 chr5 142524142 142524272 -60561260 - MLT1D LTR MaLR 0 505 384 294 48 24 0 chr5 142524272 142524314 -60561218 - L1PA6 LINE L1 -6 6148 6106 43242 49 3 4 chr5 142524359 142530477 -60555055 - L1PA6 LINE L1 -43 6111 1 17741 67 4 2 chr5 142530446 142532953 -60552579 - L1P2 LINE L1 -629 5525 3010 * 5709 85 1 0 chr5 142532952 142533732 -60551800 + L1P LINE L1 1314 2094 -4052 * 593 102 11 11 chr5 142533732 142533820 -60551712 - AluSp SINE Alu -149 164 77 707 207 42 89 chr5 142533827 142534064 -60551468 - MLT1D LTR MaLR -279 226 1 4878 241 31 54 chr5 142534066 142534589 -60550943 + L1ME1 LINE L1 3412 3945 -2270 1386 183 33 43 chr5 142534589 142534889 -60550643 - AluJb SINE Alu -12 300 4 4878 241 31 54 chr5 142534889 142535180 -60550352 + L1ME1 LINE L1 3945 4241 -1974 2888 13 0 0 chr5 142535180 142535494 -60550038 - AluYb8 SINE Alu -4 314 1 4878 241 31 54 chr5 142535494 142536627 -60548905 + L1ME1 LINE L1 4241 5316 -899 395 143 143 24 chr5 142536631 142536715 -60548817 - MER39B LTR ERV1 -2 651 558 836 180 0 13 chr5 142536730 142536880 -60548652 + FRAM SINE Alu 17 164 -12 3726 128 12 4 chr5 142536880 142537442 -60548090 - MER39B LTR ERV1 -86 567 1 2403 216 43 84 chr5 142537443 142537907 -60547625 + L1ME1 LINE L1 5323 5730 -505 2129 119 0 0 chr5 142537907 142538192 -60547340 - AluSq SINE Alu -25 288 4 2403 216 43 84 chr5 142538192 142538674 -60546858 + L1ME1 LINE L1 5730 6230 -5 29 47 0 0 chr5 142538735 142538778 -60546754 + AT_rich Low_complexity Low_complexity 1 43 0 1681 154 0 32 chr5 142538986 142539266 -60546266 + AluJb SINE Alu 1 271 -41 3925 29 8 12 chr5 142539733 142540223 -60545309 + L1PA4 LINE L1 5665 6152 -3 1296 274 41 11 chr5 142540861 142541321 -60544211 + L1MC5 LINE L1 5524 5997 -1811 354 238 74 107 chr5 142541664 142542029 -60543503 + L1MC5 LINE L1 7190 7501 -541 263 254 37 15 chr5 142542054 142542188 -60543344 + L1MC5 LINE L1 7349 7485 -476 336 307 25 0 chr5 142542246 142542409 -60543123 + L1MC5 LINE L1 7611 7777 -184 21 0 0 0 chr5 142543351 142543372 -60542160 + AT_rich Low_complexity Low_complexity 1 21 0 31151 73 3 2 chr5 142543435 142549219 -60536313 - L1PA5 LINE L1 -3 6151 366 206 211 0 0 chr5 142551588 142551626 -60533906 + CT-rich Low_complexity Low_complexity 3 40 0 214 147 0 0 chr5 142552155 142552189 -60533343 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 37065 77 8 8 chr5 142554487 142560625 -60524907 - L1PA6 LINE L1 -4 6150 11 402 315 74 37 chr5 142561402 142561618 -60523914 + MIR SINE MIR 14 237 -25 1622 159 35 53 chr5 142561737 142561790 -60523742 - MER7A DNA MER2_type -2692 346 294 2109 134 16 0 chr5 142561790 142562096 -60523436 + AluSx SINE Alu 1 311 -1 1622 159 35 53 chr5 142562096 142562382 -60523150 - MER7A DNA MER2_type -2744 294 15 2122 101 3 17 chr5 142562949 142563264 -60522268 + AluSq SINE Alu 1 311 0 293 299 159 0 chr5 142563911 142564018 -60521514 - L2 LINE L2 0 3313 3190 342 289 22 22 chr5 142564150 142564285 -60521247 + GA-rich Low_complexity Low_complexity 5 139 0 255 261 77 60 chr5 142564301 142564439 -60521093 + MIR SINE MIR 31 175 -62 254 250 36 72 chr5 142564982 142565111 -60520421 + MIR SINE MIR 5 127 -102 1253 151 27 18 chr5 142565522 142565747 -60519785 + MER7A DNA MER2_type 29 253 -93 27 62 0 0 chr5 142566428 142566476 -60519056 + AT_rich Low_complexity Low_complexity 1 48 0 189 0 0 0 chr5 142566890 142566911 -60518621 + (CAT)n Simple_repeat Simple_repeat 3 23 0 631 306 73 9 chr5 142566952 142567171 -60518361 - MIR SINE MIR -9 253 21 2312 112 0 3 chr5 142567919 142568224 -60517308 + AluSx SINE Alu 1 304 -8 2298 119 0 0 chr5 142568525 142568835 -60516697 - AluSx SINE Alu -2 310 1 2402 85 0 7 chr5 142570011 142570316 -60515216 - AluSq SINE Alu -10 303 1 791 219 50 10 chr5 142570454 142570655 -60514877 - MLT1C LTR MaLR 0 467 259 26 30 0 0 chr5 142570869 142570902 -60514630 + AT_rich Low_complexity Low_complexity 1 33 0 367 195 9 80 chr5 142571238 142571351 -60514181 - L1PB4 LINE L1 -72 6084 5980 292 323 25 57 chr5 142572305 142572463 -60513069 + MIR3 SINE MIR 16 168 -40 1600 185 13 25 chr5 142572750 142573064 -60512468 + AluJo SINE Alu 1 310 -2 1051 274 118 85 chr5 142573473 142575027 -60510505 + HAL1 LINE L1 111 1716 -791 227 143 41 0 chr5 142575247 142575296 -60510236 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 25 51 0 0 chr5 142575587 142575626 -60509906 + AT_rich Low_complexity Low_complexity 1 39 0 698 241 61 58 chr5 142575715 142576026 -60509506 - MLT1H LTR MaLR -237 312 1 2508 74 0 0 chr5 142576364 142576662 -60508870 + AluY SINE Alu 1 298 -13 5670 103 1 5 chr5 142577280 142578063 -60507469 - LTR17 LTR ERV1 0 780 1 43 35 0 0 chr5 142578717 142578774 -60506758 + AT_rich Low_complexity Low_complexity 1 57 0 180 133 0 0 chr5 142579657 142579687 -60505845 + L2 LINE L2 3243 3272 0 332 384 18 6 chr5 142579760 142579924 -60505608 - L1ME LINE L1 -473 5648 5483 22 0 0 0 chr5 142580524 142580546 -60504986 + AT_rich Low_complexity Low_complexity 1 22 0 949 119 16 0 chr5 142580551 142580677 -60504855 + AluSp SINE Alu 5 132 -181 1474 87 15 0 chr5 142580703 142580898 -60504634 + AluSg/x SINE Alu 95 292 -20 29 0 0 0 chr5 142580898 142580927 -60504605 + AT_rich Low_complexity Low_complexity 1 29 0 186 103 0 0 chr5 142582035 142582064 -60503468 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 450 292 67 67 chr5 142582064 142582457 -60503075 - L2 LINE L2 -44 3269 2874 670 288 107 19 chr5 142582562 142582833 -60502699 - L2 LINE L2 -752 2562 2268 22 0 0 0 chr5 142583995 142584017 -60501515 + AT_rich Low_complexity Low_complexity 1 22 0 1534 194 0 48 chr5 142584719 142585028 -60500504 + AluJo SINE Alu 1 294 -18 30 45 0 0 chr5 142585219 142585263 -60500269 + AT_rich Low_complexity Low_complexity 1 44 0 191 361 0 0 chr5 142585653 142585714 -60499818 + MIR SINE MIR 45 105 -103 267 301 177 38 chr5 142585731 142585917 -60499615 + MIR SINE MIR 31 242 -20 613 320 84 10 chr5 142586072 142586369 -60499163 + L2 LINE L2 2069 2387 -927 219 229 325 38 chr5 142586352 142586509 -60499023 + L2 LINE L2 2855 3056 -257 * 809 251 116 19 chr5 142586527 142586906 -60498626 - LTR52 LTR ERVL -3 418 3 427 235 139 53 chr5 142586934 142587121 -60498411 + L2 LINE L2 3101 3303 -10 399 239 0 0 chr5 142589155 142589285 -60496247 + CT-rich Low_complexity Low_complexity 4 133 0 449 243 7 96 chr5 142589296 142589432 -60496100 - L2 LINE L2 -1 3312 3189 292 244 47 12 chr5 142589468 142589554 -60495978 + MIR SINE MIR 112 200 -62 1393 150 26 19 chr5 142589969 142590235 -60495297 - MER101 LTR ERV1 -8 466 199 864 149 22 0 chr5 142590277 142590411 -60495121 + AluJo SINE Alu 1 137 -175 1921 164 7 0 chr5 142590414 142590713 -60494819 + AluJb SINE Alu 6 306 -6 861 167 0 13 chr5 142590720 142590876 -60494656 - MER101 LTR ERV1 -314 160 7 386 315 0 11 chr5 142591034 142591215 -60494317 + CT-rich Low_complexity Low_complexity 1 179 0 790 242 0 75 chr5 142592181 142592330 -60493202 - MER58A DNA MER1_type -2197 223 97 2469 63 0 0 chr5 142592330 142592633 -60492899 - AluY SINE Alu -8 303 1 790 242 0 75 chr5 142592633 142592723 -60492809 - MER58A DNA MER1_type -2323 97 2 2365 63 0 38 chr5 142592793 142593111 -60492421 - AluY SINE Alu -5 306 1 416 35 17 0 chr5 142593168 142593226 -60492306 + (TG)n Simple_repeat Simple_repeat 1 59 0 2323 94 17 0 chr5 142593890 142594187 -60491345 + AluSg1 SINE Alu 1 302 -7 21 36 0 0 chr5 142594773 142594801 -60490731 + AT_rich Low_complexity Low_complexity 1 28 0 2064 116 34 0 chr5 142595587 142595881 -60489651 - AluSq SINE Alu -9 304 1 367 280 144 50 chr5 142595899 142596378 -60489154 - HAL1 LINE L1 -10 2497 1974 243 61 0 0 chr5 142596393 142596426 -60489106 + (TG)n Simple_repeat Simple_repeat 2 34 0 1966 111 0 7 chr5 142596426 142596697 -60488835 - AluSx SINE Alu -42 270 2 552 255 20 35 chr5 142596790 142596990 -60488542 - L1ME3A LINE L1 -166 6004 5808 1566 220 42 25 chr5 142597039 142597470 -60488062 + MLT1E2 LTR MaLR 11 448 -178 1015 229 16 8 chr5 142597467 142597720 -60487812 + MLT1E2 LTR MaLR 370 624 -2 * 1021 265 35 28 chr5 142597726 142598215 -60487317 - L1ME3A LINE L1 -369 5801 5311 279 273 28 89 chr5 142598259 142598501 -60487031 - LTR40c LTR ERVL -76 389 204 391 226 123 0 chr5 142598577 142598683 -60486849 - LTR40a LTR ERVL -319 200 82 421 259 20 0 chr5 142598684 142598831 -60486701 + (TA)n Simple_repeat Simple_repeat 2 151 0 2216 266 50 43 chr5 142598838 142600532 -60485000 - L1MEc LINE L1 -3154 3061 1230 580 283 100 41 chr5 142600607 142600897 -60484635 - HAL1 LINE L1 -1674 833 527 793 215 120 26 chr5 142600905 142601177 -60484355 - MER65B LTR ERV1 -2 481 230 285 255 57 28 chr5 142601206 142601312 -60484220 - MER65C LTR ERV1 -352 109 1 314 360 35 29 chr5 142601316 142601488 -60484044 - HAL1 LINE L1 -2012 495 323 343 325 86 12 chr5 142601539 142601702 -60483830 - HAL1 LINE L1 -2281 226 52 276 284 159 51 chr5 142602099 142602275 -60483257 - MIR SINE MIR -23 239 45 2322 86 0 13 chr5 142602837 142603140 -60482392 + AluY SINE Alu 6 304 -7 253 258 116 56 chr5 142603549 142603747 -60481785 + L1MEc LINE L1 1447 1656 -4740 1188 277 171 20 chr5 142603820 142604698 -60480834 + L1MEc LINE L1 2707 3716 -2499 325 363 88 30 chr5 142606437 142606869 -60478663 + HAL1 LINE L1 1078 1534 -973 620 248 101 69 chr5 142606870 142607277 -60478255 + HAL1b LINE L1 478 897 -451 21 0 0 0 chr5 142607307 142607328 -60478204 + AT_rich Low_complexity Low_complexity 1 21 0 1147 253 124 71 chr5 142607477 142608010 -60477522 - MER77 LTR ERV1 -4 601 41 270 330 32 0 chr5 142608042 142608136 -60477396 + MIR SINE MIR 55 151 -57 183 129 0 0 chr5 142608320 142608351 -60477181 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 408 230 40 54 chr5 142608926 142609074 -60476458 + MIR SINE MIR 111 256 -6 770 236 0 0 chr5 142609400 142609565 -60475967 + AluSg/x SINE Alu 135 299 -11 23 0 0 0 chr5 142610165 142610188 -60475344 + AT_rich Low_complexity Low_complexity 1 23 0 1170 210 123 13 chr5 142610487 142610797 -60474735 + MER2 DNA MER2_type 1 344 0 395 351 48 12 chr5 142611077 142611242 -60474290 + MIR SINE MIR 34 204 -58 698 293 57 45 chr5 142612125 142612371 -60473161 + MIR SINE MIR 3 251 -11 521 66 44 0 chr5 142612376 142612467 -60473065 + (ATG)n Simple_repeat Simple_repeat 1 95 0 1549 169 11 7 chr5 142612575 142612847 -60472685 + AluJb SINE Alu 1 273 -39 21 57 0 0 chr5 142614554 142614589 -60470943 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 142614802 142614830 -60470702 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 142615561 142615585 -60469947 + AT_rich Low_complexity Low_complexity 1 24 0 1171 234 106 6 chr5 142617381 142617710 -60467822 - L1MD2 LINE L1 -17 6342 5981 231 299 103 28 chr5 142617885 142617992 -60467540 + L2 LINE L2 3199 3313 0 623 280 84 31 chr5 142618127 142618541 -60466991 + L1ME4a LINE L1 5475 5910 -211 1881 225 100 18 chr5 142618829 142619340 -60466192 - MER119 DNA MER1_type 0 583 31 21 89 0 0 chr5 142620315 142620371 -60465161 + AT_rich Low_complexity Low_complexity 1 56 0 11664 85 14 1 chr5 142620422 142622056 -60463476 - L1PA7 LINE L1 -1402 4744 3085 6748 62 7 0 chr5 142622056 142623476 -60462056 + L1PA7 LINE L1 4731 6151 -3 11664 85 14 1 chr5 142623476 142623503 -60462029 - L1P LINE L1 -3061 3085 3060 1062 201 107 8 chr5 142624651 142624914 -60460618 + AluJo SINE Alu 1 289 -13 292 298 112 41 chr5 142625376 142625854 -60459678 + L1ME4a LINE L1 5505 6016 -105 456 161 2 0 chr5 142626024 142626106 -60459426 + MLT1A2 LTR MaLR 299 374 0 1114 277 58 23 chr5 142626106 142626681 -60458851 + L1M4c LINE L1 1377 2121 -4442 1575 181 51 0 chr5 142626932 142627225 -60458307 - AluSx SINE Alu -4 308 1 379 298 13 10 chr5 142628505 142628638 -60456894 + MER5A DNA MER1_type 2 145 -44 258 350 67 88 chr5 142628642 142628828 -60456704 + L2 LINE L2 185 362 -2952 2091 120 0 40 chr5 142628828 142629154 -60456378 + AluSq SINE Alu 1 313 0 258 350 67 88 chr5 142629154 142629298 -60456234 + L2 LINE L2 362 508 -2806 242 336 105 37 chr5 142629423 142629718 -60455814 + L2 LINE L2 1267 1581 -1733 2759 3 0 0 chr5 142629721 142630021 -60455511 - AluYa8 SINE Alu -10 300 1 458 302 71 31 chr5 142630052 142630307 -60455225 + L1M3d LINE L1 9 273 -5618 1515 289 67 64 chr5 142630315 142631018 -60454514 + L1M4c LINE L1 640 1344 -5309 2540 261 46 28 chr5 142631020 142632879 -60452653 + L1M4c LINE L1 1365 3365 -3367 2184 213 8 88 chr5 142632879 142633481 -60452051 - MLT2B3 LTR ERVL 0 554 1 1240 175 53 53 chr5 142633481 142633818 -60451714 - ERVL-B3 LTR ERVL -7 5757 5421 6587 159 36 11 chr5 142633837 142634972 -60450560 - ERVL-B3 LTR ERVL -724 5040 3877 1935 194 28 16 chr5 142634971 142635588 -60449944 - ERVL-B3 LTR ERVL -2026 3738 3036 * 287 248 152 8 chr5 142635693 142635818 -60449714 + L1MC4a LINE L1 5293 5435 -2373 1054 295 55 3 chr5 142635821 142636184 -60449348 + L1MC4a LINE L1 5500 5881 -1927 727 302 10 72 chr5 142636271 142636562 -60448970 - ERVL-B3 LTR ERVL -1900 3096 2824 1073 296 93 42 chr5 142636682 142637297 -60448235 - ERVL-B3 LTR ERVL -3303 2461 1816 1293 184 56 22 chr5 142639032 142639423 -60446109 + L1MC3 LINE L1 7504 7785 0 1664 181 89 11 chr5 142639559 142639908 -60445624 - L1MC3 LINE L1 -940 6845 6470 515 256 71 30 chr5 142640523 142640691 -60444841 + MIR SINE MIR 33 207 -55 2234 82 27 7 chr5 142641247 142641541 -60443991 + AluSp SINE Alu 1 300 -13 9011 149 12 8 chr5 142641834 142643251 -60442281 + L1M1 LINE L1 2 1423 -6142 * 14716 178 22 8 chr5 142643248 142643882 -60441650 + L1M1 LINE L1 2899 3522 -4043 2013 138 3 0 chr5 142643882 142644187 -60441345 - AluY SINE Alu -5 306 1 14716 178 22 8 chr5 142644187 142645343 -60440189 + L1M1 LINE L1 3522 4660 -2905 2212 127 0 0 chr5 142645343 142645651 -60439881 + AluY SINE Alu 1 308 -3 14716 178 22 8 chr5 142645651 142647612 -60437920 + L1M1 LINE L1 4660 6706 -859 8719 167 36 10 chr5 142647612 142649192 -60436340 - Tigger7 DNA MER2_type -866 1621 1 1137 211 0 0 chr5 142649775 142649984 -60435548 - Tigger7 DNA MER2_type -2187 300 92 21 0 0 0 chr5 142651130 142651151 -60434381 + AT_rich Low_complexity Low_complexity 1 21 0 242 189 0 0 chr5 142651592 142651629 -60433903 + L2 LINE L2 3201 3237 -35 625 194 7 50 chr5 142651884 142652023 -60433509 - FLAM_A SINE Alu 0 133 1 1957 191 78 41 chr5 142652387 142652874 -60432658 + MLT1D LTR MaLR 1 505 0 904 173 45 22 chr5 142653824 142654003 -60431529 + MER5A DNA MER1_type 7 189 0 27 62 0 0 chr5 142655034 142655082 -60430450 + AT_rich Low_complexity Low_complexity 1 48 0 296 355 87 20 chr5 142655415 142655714 -60429818 + L2 LINE L2 1756 2074 -1240 311 218 7 150 chr5 142657294 142657441 -60428091 - L1MEc LINE L1 -4118 2445 2320 246 209 58 12 chr5 142657526 142657612 -60427920 - L1MEc LINE L1 -5030 1354 1265 298 300 76 50 chr5 142657724 142658187 -60427345 + L1ME3A LINE L1 4742 5216 -930 31 44 0 0 chr5 142658850 142658895 -60426637 + AT_rich Low_complexity Low_complexity 1 45 0 239 298 175 9 chr5 142659035 142659149 -60426383 + MIR SINE MIR 8 140 -122 249 341 55 0 chr5 142659537 142659628 -60425904 - MER5A DNA MER1_type -84 105 10 429 20 0 0 chr5 142660485 142660535 -60424997 + (TG)n Simple_repeat Simple_repeat 2 51 0 521 256 22 0 chr5 142660761 142660898 -60424634 + MLT1I LTR MaLR 3 142 -267 2064 173 45 17 chr5 142660902 142661324 -60424208 + Tigger2a DNA MER2_type 1 434 0 287 244 24 12 chr5 142661397 142661479 -60424053 + MLT1I LTR MaLR 309 391 -18 672 306 48 22 chr5 142662260 142662767 -60422765 + L1ME3A LINE L1 5352 5873 -297 25 31 0 0 chr5 142662805 142662837 -60422695 + AT_rich Low_complexity Low_complexity 1 32 0 235 289 29 10 chr5 142663144 142663248 -60422284 - L1ME LINE L1 -248 5873 5768 300 329 155 5 chr5 142663327 142663534 -60421998 - MIR SINE MIR 0 262 25 290 311 68 20 chr5 142663625 142663773 -60421759 + MLT1J2 LTR MaLR 3 157 -293 198 0 0 0 chr5 142664035 142664057 -60421475 + (A)n Simple_repeat Simple_repeat 1 22 0 376 290 76 14 chr5 142664439 142664584 -60420948 + MIR SINE MIR 48 201 -61 1527 221 96 48 chr5 142664593 142665073 -60420459 + MLT1D LTR MaLR 3 505 0 342 306 43 93 chr5 142665533 142665791 -60419741 + MIR SINE MIR 4 248 -14 403 337 15 25 chr5 142666550 142666746 -60418786 + MLT1L LTR MaLR 201 394 -221 3823 137 57 37 chr5 142666986 142667014 -60418518 + Tigger2 DNA MER2_type 1 27 -2691 1917 61 140 43 chr5 142667014 142667292 -60418240 + AluSq SINE Alu 1 305 -8 3823 137 57 37 chr5 142667292 142667706 -60417826 + Tigger2 DNA MER2_type 27 466 -2252 2184 106 13 7 chr5 142667706 142668007 -60417525 + AluSx SINE Alu 1 303 -9 3823 137 57 37 chr5 142668007 142668298 -60417234 + Tigger2 DNA MER2_type 466 750 -1968 1198 153 14 96 chr5 142668350 142668631 -60416901 + Tigger2 DNA MER2_type 2461 2718 0 961 303 204 38 chr5 142668733 142669772 -60415760 - L2 LINE L2 -1 3312 2062 1161 188 0 54 chr5 142669773 142670012 -60415520 + AluJo SINE Alu 5 230 -82 270 0 0 0 chr5 142670012 142670042 -60415490 + (A)n Simple_repeat Simple_repeat 1 30 0 448 291 183 51 chr5 142670042 142670568 -60414964 - L2 LINE L2 -1209 2105 1511 2385 64 10 3 chr5 142671261 142671556 -60413976 + AluY SINE Alu 1 297 -14 1617 291 133 79 chr5 142671565 142671817 -60413715 + L2 LINE L2 1462 1699 -1573 1008 175 0 0 chr5 142671817 142671971 -60413561 + FRAM SINE Alu 1 154 -12 1617 291 133 79 chr5 142671971 142672197 -60413335 + L2 LINE L2 1699 1911 -1361 227 200 93 27 chr5 142672197 142672272 -60413260 - MER116 DNA Mariner 0 80 1 1617 291 133 79 chr5 142672272 142672808 -60412724 + L2 LINE L2 1911 2416 -856 1143 183 24 0 chr5 142672808 142673021 -60412511 - MER20 DNA MER1_type 0 219 2 1617 291 133 79 chr5 142673021 142673604 -60411928 + L2 LINE L2 2416 3217 -55 625 250 309 16 chr5 142674268 142674640 -60410892 - L2 LINE L2 -9 3304 2824 779 189 10 95 chr5 142674676 142674875 -60410657 - L1ME2 LINE L1 -73 6097 5910 2265 109 0 0 chr5 142674875 142675169 -60410363 - AluSc SINE Alu -15 294 1 779 189 10 95 chr5 142675169 142675196 -60410336 - L1ME2 LINE L1 -260 5910 5882 848 237 80 43 chr5 142675222 142675572 -60409960 - L1ME2 LINE L1 -541 5623 5261 632 314 49 28 chr5 142675615 142676207 -60409325 - MERVL LTR ERVL -1654 4000 3390 * 1412 315 17 32 chr5 142676204 142676899 -60408633 - MERVL LTR ERVL -1905 3091 2612 2080 292 82 7 chr5 142676905 142677586 -60407946 - MERVL LTR ERVL -3927 1069 338 346 284 0 0 chr5 142677882 142677956 -60407576 - LTR16A LTR ERVL 0 450 377 251 211 0 14 chr5 142677958 142678029 -60407503 - L1M4c LINE L1 -5053 1331 1262 2789 102 66 13 chr5 142678721 142679363 -60406169 - L1P4 LINE L1 -604 5564 4889 295 252 129 22 chr5 142679447 142679586 -60405946 - MARNA DNA Mariner -155 431 278 5330 45 0 5 chr5 142682700 142683371 -60402161 - L1P LINE L1 -1065 5081 4414 321 274 20 0 chr5 142685180 142685282 -60400250 - LTR16A LTR ERVL -107 343 240 302 319 9 18 chr5 142685303 142685416 -60400116 - MERVL LTR ERVL -2562 2923 2812 590 259 81 22 chr5 142685504 142685705 -60399827 - MLT1J LTR MaLR -279 188 1 311 230 40 20 chr5 142685705 142685805 -60399727 + HAL1b LINE L1 699 800 -548 776 155 0 0 chr5 142685879 142685995 -60399537 + FLAM_C SINE Alu 1 116 -17 1399 58 0 0 chr5 142686049 142686222 -60399310 - L1PA7 LINE L1 -5 6149 5977 798 309 67 33 chr5 142687498 142687857 -60397675 + L2 LINE L2 2943 3313 0 23 33 0 0 chr5 142688126 142688156 -60397376 + AT_rich Low_complexity Low_complexity 1 30 0 270 296 176 52 chr5 142689098 142689695 -60395837 + L2 LINE L2 1593 2263 -1051 1944 269 126 34 chr5 142689718 142690066 -60395466 + L2 LINE L2 2078 2393 -921 1720 186 23 3 chr5 142690066 142690372 -60395160 - AluJb SINE Alu 0 312 1 1944 269 126 34 chr5 142690372 142690786 -60394746 + L2 LINE L2 2393 2910 -404 751 312 58 53 chr5 142690755 142691169 -60394363 + L2 LINE L2 2818 3233 -80 * 22 0 0 0 chr5 142691343 142691365 -60394167 + AT_rich Low_complexity Low_complexity 1 22 0 237 180 0 0 chr5 142691391 142691441 -60394091 + (TA)n Simple_repeat Simple_repeat 1 50 0 235 341 123 29 chr5 142691555 142691693 -60393839 + L2 LINE L2 2603 2753 -561 6214 86 10 14 chr5 142692502 142693763 -60391769 - L1PA10 LINE L1 -11 6157 4889 388 254 171 28 chr5 142693849 142694066 -60391466 - MARNA DNA Mariner -155 431 184 21 36 0 0 chr5 142697199 142697227 -60388305 + AT_rich Low_complexity Low_complexity 1 28 0 2245 105 3 0 chr5 142697586 142697892 -60387640 + AluSq SINE Alu 1 307 -6 342 0 0 0 chr5 142699099 142699137 -60386395 + (TG)n Simple_repeat Simple_repeat 2 39 0 552 261 99 21 chr5 142699150 142699559 -60385973 - MLT1D LTR MaLR -6 488 1 1196 202 4 25 chr5 142701398 142701641 -60383891 + MER8 DNA MER2_type 2 239 0 384 282 17 34 chr5 142701980 142702097 -60383435 + MIR SINE MIR 1 115 -147 870 162 0 0 chr5 142702282 142702418 -60383114 - MER20 DNA MER1_type -7 212 77 368 235 37 0 chr5 142702453 142702534 -60382998 - MER20 DNA MER1_type -135 84 1 22 0 0 0 chr5 142703392 142703414 -60382118 + AT_rich Low_complexity Low_complexity 1 22 0 3561 210 44 20 chr5 142703602 142705156 -60380376 + L1MB8 LINE L1 4342 5933 -245 355 355 82 4 chr5 142705201 142705469 -60380063 + L2 LINE L2 3012 3300 -13 1145 135 39 0 chr5 142705575 142705783 -60379749 - L1MA8 LINE L1 -10 6281 6066 231 339 183 17 chr5 142705789 142705969 -60379563 - MIR SINE MIR -52 210 1 721 191 22 7 chr5 142706256 142706392 -60379140 - MLT1A1 LTR MaLR -209 156 19 857 245 14 23 chr5 142707379 142707595 -60377937 + MLT1J LTR MaLR 1 214 -297 417 237 111 82 chr5 142707684 142707891 -60377641 + MLT1J LTR MaLR 265 477 -34 816 266 44 24 chr5 142708088 142708336 -60377196 + MIR SINE MIR 2 254 -8 186 375 115 0 chr5 142708354 142708458 -60377074 - L2 LINE L2 -8 3264 3149 1992 145 0 0 chr5 142708557 142708864 -60376668 - AluSx SINE Alu 0 307 1 466 264 95 54 chr5 142709790 142710032 -60375500 + MER112 DNA MER1_type 1 252 -4 416 225 0 0 chr5 142712153 142712233 -60373299 - Tigger3(Golem) DNA MER2_type 0 3029 2950 923 188 13 0 chr5 142712387 142712536 -60372996 + FRAM SINE Alu 1 146 -30 385 356 88 42 chr5 142713047 142713331 -60372201 + L2 LINE L2 2976 3272 0 3128 113 55 10 chr5 142713632 142714121 -60371411 - MER9 LTR ERVK 0 511 1 815 149 15 30 chr5 142714170 142714304 -60371228 + FLAM_C SINE Alu 2 133 0 3504 94 6 14 chr5 142714391 142714882 -60370650 + LTR15 LTR ERV1 1 487 -6 2285 118 0 0 chr5 142714940 142715245 -60370287 + AluSx SINE Alu 3 307 -5 215 309 64 0 chr5 142715685 142715779 -60369753 - MIR SINE MIR -61 201 102 2652 276 38 23 chr5 142716332 142717168 -60368364 + L1MEc LINE L1 34 887 -5509 1656 181 0 26 chr5 142717168 142717471 -60368061 + AluJo SINE Alu 5 299 -13 2652 276 38 23 chr5 142717471 142717595 -60367937 + L1MEc LINE L1 887 1008 -5388 1908 240 96 64 chr5 142717615 142718437 -60367095 + L1MEc LINE L1 2407 3267 -2948 1394 177 98 11 chr5 142718437 142718714 -60366818 - AluJo SINE Alu 0 302 2 1908 240 96 64 chr5 142718714 142718866 -60366666 + L1MEc LINE L1 3267 3413 -2802 615 177 0 62 chr5 142718866 142718996 -60366536 - MLT1D LTR MaLR 0 505 384 265 71 24 0 chr5 142718996 142719038 -60366494 - L1PA6 LINE L1 -6 6148 6106 37088 74 5 2 chr5 142719083 142724814 -60360718 - L1PA6 LINE L1 -43 6111 366 206 211 0 0 chr5 142727168 142727206 -60358326 + CT-rich Low_complexity Low_complexity 3 40 0 214 147 0 0 chr5 142727735 142727769 -60357763 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2391 68 0 0 chr5 142730061 142730368 -60355164 - L1PA5 LINE L1 -4 6150 5844 788 196 37 28 chr5 142730652 142730866 -60354666 + L1PA4 LINE L1 5037 5252 -894 5087 90 3 81 chr5 142730867 142731842 -60353690 + L1PA4 LINE L1 5254 6152 -3 1283 276 41 11 chr5 142732480 142732940 -60352592 + L1MC5 LINE L1 5524 5997 -1811 417 241 61 121 chr5 142733289 142733794 -60351738 + L1MC5 LINE L1 7190 7501 -476 308 259 34 54 chr5 142733861 142734008 -60351524 + L1MC4 LINE L1 7736 7879 -163 21 0 0 0 chr5 142734957 142734978 -60350554 + AT_rich Low_complexity Low_complexity 1 21 0 38979 76 8 7 chr5 142735046 142741181 -60344351 - L1PA5 LINE L1 -3 6151 11 379 319 74 37 chr5 142741958 142742174 -60343358 + MIR SINE MIR 14 237 -25 1774 156 35 50 chr5 142742293 142742346 -60343186 - MER7A DNA MER2_type -2692 346 294 2076 134 16 0 chr5 142742346 142742652 -60342880 + AluSx SINE Alu 1 311 -1 1774 156 35 50 chr5 142742652 142742937 -60342595 - MER7A DNA MER2_type -2744 294 15 221 281 49 37 chr5 142742953 142743035 -60342497 - MIR3 SINE MIR -124 84 2 2109 103 0 18 chr5 142743509 142743819 -60341713 + AluSq SINE Alu 7 311 0 297 299 159 0 chr5 142744455 142744562 -60340970 - L2 LINE L2 0 3313 3190 342 289 22 22 chr5 142744694 142744829 -60340703 + GA-rich Low_complexity Low_complexity 5 139 0 249 261 77 60 chr5 142744845 142744983 -60340549 + MIR SINE MIR 31 175 -62 268 297 55 55 chr5 142745526 142745696 -60339836 + MIR SINE MIR 5 181 -80 1303 156 27 18 chr5 142746066 142746291 -60339241 + MER7A DNA MER2_type 29 253 -93 189 0 0 0 chr5 142747434 142747455 -60338077 + (CAT)n Simple_repeat Simple_repeat 3 23 0 627 306 73 9 chr5 142747496 142747715 -60337817 - MIR SINE MIR -9 253 21 2299 108 0 3 chr5 142748463 142748768 -60336764 + AluSx SINE Alu 1 304 -8 2269 119 0 0 chr5 142749078 142749389 -60336143 - AluSx SINE Alu -1 311 1 2421 81 0 7 chr5 142750565 142750873 -60334659 - AluSq SINE Alu -7 306 1 853 219 50 10 chr5 142751011 142751212 -60334320 - MLT1C LTR MaLR 0 467 259 26 30 0 0 chr5 142751426 142751459 -60334073 + AT_rich Low_complexity Low_complexity 1 33 0 400 195 9 80 chr5 142751795 142751908 -60333624 - L1PB4 LINE L1 -72 6084 5980 296 323 25 57 chr5 142752862 142753020 -60332512 + MIR3 SINE MIR 16 168 -40 1567 188 13 16 chr5 142753307 142753610 -60331922 + AluJo SINE Alu 1 302 -10 1447 270 120 86 chr5 142754030 142755584 -60329948 + HAL1 LINE L1 111 1716 -791 227 143 41 0 chr5 142755804 142755853 -60329679 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 25 51 0 0 chr5 142756144 142756183 -60329349 + AT_rich Low_complexity Low_complexity 1 39 0 795 246 72 61 chr5 142756237 142756583 -60328949 - MLT1H LTR MaLR -199 350 1 2495 74 0 0 chr5 142756921 142757219 -60328313 + AluY SINE Alu 1 298 -13 5619 103 1 5 chr5 142757837 142758620 -60326912 - LTR17 LTR ERV1 0 780 1 43 35 0 0 chr5 142759274 142759331 -60326201 + AT_rich Low_complexity Low_complexity 1 57 0 182 133 0 0 chr5 142760128 142760158 -60325374 + L2 LINE L2 3243 3272 0 234 378 18 6 chr5 142760231 142760395 -60325137 - L1ME LINE L1 -473 5648 5483 22 0 0 0 chr5 142760993 142761015 -60324517 + AT_rich Low_complexity Low_complexity 1 22 0 883 120 24 0 chr5 142761020 142761145 -60324387 + AluSp SINE Alu 5 132 -181 1443 92 15 0 chr5 142761171 142761366 -60324166 + AluSg/x SINE Alu 95 292 -20 29 0 0 0 chr5 142761366 142761395 -60324137 + AT_rich Low_complexity Low_complexity 1 29 0 186 103 0 0 chr5 142762503 142762532 -60323000 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 438 292 67 67 chr5 142762532 142762925 -60322607 - L2 LINE L2 -44 3269 2874 672 273 115 20 chr5 142763048 142763301 -60322231 - L2 LINE L2 -770 2544 2268 22 0 0 0 chr5 142764463 142764485 -60321047 + AT_rich Low_complexity Low_complexity 1 22 0 1501 187 0 47 chr5 142765195 142765495 -60320037 + AluJo SINE Alu 9 294 -18 30 45 0 0 chr5 142765686 142765730 -60319802 + AT_rich Low_complexity Low_complexity 1 44 0 194 361 0 0 chr5 142766120 142766181 -60319351 + MIR SINE MIR 45 105 -103 265 301 177 38 chr5 142766198 142766384 -60319148 + MIR SINE MIR 31 242 -20 607 320 84 10 chr5 142766539 142766836 -60318696 + L2 LINE L2 2069 2387 -927 205 229 325 38 chr5 142766819 142766976 -60318556 + L2 LINE L2 2855 3056 -257 * 929 251 116 19 chr5 142766994 142767373 -60318159 - LTR52 LTR ERVL -3 418 3 446 230 139 53 chr5 142767401 142767588 -60317944 + L2 LINE L2 3101 3303 -10 459 240 0 0 chr5 142769621 142769767 -60315765 + CT-rich Low_complexity Low_complexity 4 149 0 446 243 7 96 chr5 142769778 142769914 -60315618 - L2 LINE L2 -1 3312 3189 297 244 47 12 chr5 142769950 142770036 -60315496 + MIR SINE MIR 112 200 -62 1484 150 26 19 chr5 142770451 142770717 -60314815 - MER101 LTR ERV1 -8 466 199 851 147 16 0 chr5 142770764 142770893 -60314639 + AluJo SINE Alu 7 137 -175 1848 171 7 0 chr5 142770896 142771195 -60314337 + AluJb SINE Alu 6 306 -6 916 160 0 13 chr5 142771202 142771358 -60314174 - MER101 LTR ERV1 -314 160 7 386 315 0 11 chr5 142771516 142771697 -60313835 + CT-rich Low_complexity Low_complexity 1 179 0 805 242 0 75 chr5 142772663 142772812 -60312720 - MER58A DNA MER1_type -2197 223 97 2460 63 0 0 chr5 142772812 142773114 -60312418 - AluY SINE Alu -9 302 1 805 242 0 75 chr5 142773114 142773204 -60312328 - MER58A DNA MER1_type -2323 97 2 2249 77 0 39 chr5 142773274 142773584 -60311948 - AluY SINE Alu -13 298 1 380 37 19 0 chr5 142773641 142773695 -60311837 + (TG)n Simple_repeat Simple_repeat 1 55 0 2315 81 0 0 chr5 142774373 142774656 -60310876 + AluSg1 SINE Alu 20 302 -7 21 36 0 0 chr5 142775240 142775268 -60310264 + AT_rich Low_complexity Low_complexity 1 28 0 2034 116 34 0 chr5 142776054 142776347 -60309185 - AluSq SINE Alu -10 303 1 485 274 146 52 chr5 142776365 142776844 -60308688 - HAL1 LINE L1 -10 2497 1974 225 65 0 0 chr5 142776859 142776890 -60308642 + (TG)n Simple_repeat Simple_repeat 2 32 0 1972 111 0 7 chr5 142776890 142777161 -60308371 - AluSx SINE Alu -42 270 2 601 255 20 35 chr5 142777254 142777454 -60308078 - L1ME3A LINE L1 -166 6073 5877 1700 220 42 25 chr5 142777503 142777934 -60307598 + MLT1E2 LTR MaLR 11 448 -178 1090 229 16 8 chr5 142777931 142778184 -60307348 + MLT1E2 LTR MaLR 370 624 -2 * 1146 267 40 38 chr5 142778190 142778662 -60306870 - L1ME3A LINE L1 -369 5870 5398 283 273 28 89 chr5 142778723 142778965 -60306567 - LTR40c LTR ERVL -76 389 204 386 226 123 0 chr5 142779041 142779147 -60306385 - LTR40a LTR ERVL -319 200 82 421 259 20 0 chr5 142779148 142779295 -60306237 + (TA)n Simple_repeat Simple_repeat 2 151 0 2115 267 50 43 chr5 142779302 142780996 -60304536 - L1MEc LINE L1 -3154 3061 1230 573 283 100 41 chr5 142781071 142781361 -60304171 - HAL1 LINE L1 -1674 833 527 722 231 119 29 chr5 142781369 142781642 -60303890 - MER65B LTR ERV1 -2 481 230 643 310 89 43 chr5 142783075 142783378 -60302154 + L2 LINE L2 2268 2584 -730 343 325 86 12 chr5 142833519 142833682 -60251850 - HAL1 LINE L1 -2281 226 52 276 284 159 51 chr5 142834079 142834255 -60251277 - MIR SINE MIR -23 239 45 2300 89 0 13 chr5 142834817 142835120 -60250412 + AluY SINE Alu 6 304 -7 253 258 116 56 chr5 142835529 142835727 -60249805 + L1MEc LINE L1 1447 1656 -4740 951 272 167 24 chr5 142835800 142836678 -60248854 + L1MEc LINE L1 2707 3716 -2499 1664 181 89 11 chr5 142836899 142837248 -60248284 - L1MC3 LINE L1 -940 6845 6470 515 256 71 30 chr5 142837859 142838027 -60247505 + MIR SINE MIR 33 207 -55 2234 82 27 7 chr5 142838583 142838877 -60246655 + AluSp SINE Alu 1 300 -13 8981 149 12 9 chr5 142839170 142840588 -60244944 + L1M1 LINE L1 2 1423 -6142 * 14717 178 22 8 chr5 142840585 142841218 -60244314 + L1M1 LINE L1 2899 3521 -4044 2013 138 3 0 chr5 142841218 142841523 -60244009 - AluY SINE Alu -5 306 1 14717 178 22 8 chr5 142841523 142842679 -60242853 + L1M1 LINE L1 3521 4659 -2906 2228 123 0 0 chr5 142842679 142842987 -60242545 + AluY SINE Alu 1 308 -3 14717 178 22 8 chr5 142842987 142844948 -60240584 + L1M1 LINE L1 4659 6706 -859 4335 142 34 19 chr5 142844948 142845694 -60239838 - Tigger7 DNA MER2_type -866 1621 865 6657 65 9 0 chr5 142845884 142847302 -60238230 + L1PA7 LINE L1 4731 6151 -3 1062 201 107 8 chr5 142848477 142848740 -60236792 + AluJo SINE Alu 1 289 -13 288 298 112 41 chr5 142849202 142849680 -60235852 + L1ME4a LINE L1 5505 6016 -105 456 161 2 0 chr5 142849850 142849932 -60235600 + MLT1A2 LTR MaLR 299 374 0 1086 286 55 21 chr5 142849932 142850507 -60235025 + L1M4c LINE L1 1377 2121 -4442 1575 181 51 0 chr5 142850763 142851056 -60234476 - AluSx SINE Alu -4 308 1 385 288 13 10 chr5 142852337 142852470 -60233062 + MER5A DNA MER1_type 2 145 -44 255 332 66 96 chr5 142852474 142852660 -60232872 + L2 LINE L2 185 358 -2956 2130 117 0 40 chr5 142852660 142852984 -60232548 + AluSq SINE Alu 1 311 -2 255 332 66 96 chr5 142852984 142853131 -60232401 + L2 LINE L2 358 508 -2806 252 337 102 36 chr5 142853256 142853559 -60231973 + L2 LINE L2 1267 1589 -1725 464 302 71 31 chr5 142853574 142853829 -60231703 + L1M3d LINE L1 9 273 -5618 1553 289 67 64 chr5 142853837 142854540 -60230992 + L1M4c LINE L1 640 1344 -5309 2500 257 48 29 chr5 142854542 142856401 -60229131 + L1M4c LINE L1 1365 3365 -3367 2210 213 8 88 chr5 142856401 142857003 -60228529 - MLT2B3 LTR ERVL 0 554 1 1213 166 38 57 chr5 142857003 142857317 -60228215 - ERVL-B3 LTR ERVL -7 5757 5450 186 43 0 0 chr5 142857317 142857340 -60228192 + (CA)n Simple_repeat Simple_repeat 2 24 0 6429 158 35 29 chr5 142857359 142858515 -60227017 - ERVL-B3 LTR ERVL -724 5040 3877 1925 194 28 14 chr5 142858514 142859130 -60226402 - ERVL-B3 LTR ERVL -2026 3738 3036 * 272 248 152 8 chr5 142859235 142859360 -60226172 + L1MC4a LINE L1 5293 5435 -2373 1026 295 55 3 chr5 142859363 142859726 -60225806 + L1MC4a LINE L1 5500 5881 -1927 721 302 10 72 chr5 142859813 142860104 -60225428 - ERVL-B3 LTR ERVL -1900 3096 2824 1070 296 93 42 chr5 142860224 142860839 -60224693 - ERVL-B3 LTR ERVL -3303 2461 1816 588 238 33 0 chr5 142861320 142861442 -60224090 - MER58A DNA MER1_type 0 127 2 26 30 0 0 chr5 142861576 142861609 -60223923 + AT_rich Low_complexity Low_complexity 1 33 0 4483 187 42 40 chr5 142861663 142863079 -60222453 - L1MA8 LINE L1 -1 6290 4849 9763 107 2 28 chr5 142863083 142863970 -60221562 - L1P LINE L1 -3169 2977 2143 4507 30 2 2 chr5 142863970 142864511 -60221021 - L1PA4 LINE L1 -2 6153 5613 9763 107 2 28 chr5 142864511 142865123 -60220409 - L1P LINE L1 -4003 2143 1517 * 11285 99 14 2 chr5 142865122 142866764 -60218768 + L1P LINE L1 2983 4643 -1503 216 329 29 0 chr5 142866977 142867047 -60218485 - L2 LINE L2 -6 3266 3195 209 167 0 62 chr5 142867597 142867645 -60217887 + MIR3 SINE MIR 159 203 -5 * 326 276 200 0 chr5 142867641 142867746 -60217786 - MIR SINE MIR -64 144 19 675 164 181 6 chr5 142868304 142868343 -60217189 + L1MA9 LINE L1 6112 6143 -169 333 0 0 0 chr5 142868343 142868380 -60217152 + (CA)n Simple_repeat Simple_repeat 1 37 0 675 164 181 6 chr5 142868380 142868511 -60217021 + L1MA9 LINE L1 6143 6312 0 2639 203 33 33 chr5 142868617 142869228 -60216304 + MLT1E3 LTR MaLR 13 623 -1 297 276 60 75 chr5 142869484 142869683 -60215849 - HAL1 LINE L1 -62 2445 2250 1139 215 76 55 chr5 142870606 142870987 -60214545 - MLT2C1 LTR ERVL -2 395 7 1706 152 50 39 chr5 142871043 142871404 -60214128 - MLT1A1 LTR MaLR 0 365 1 504 251 168 5 chr5 142871465 142871658 -60213874 + MLT1H1 LTR MaLR 76 331 -218 1202 284 100 30 chr5 142871773 142872281 -60213251 - MLT1H1 LTR MaLR -3 552 9 903 293 58 58 chr5 142872284 142872646 -60212886 + L2 LINE L2 2827 3191 -122 2115 130 0 13 chr5 142872646 142872961 -60212571 - AluSx SINE Alu -1 311 1 903 293 58 58 chr5 142872961 142873082 -60212450 + L2 LINE L2 3190 3310 -3 228 200 17 33 chr5 142874356 142874386 -60211146 + (CATA)n Simple_repeat Simple_repeat 3 32 -29 1573 158 29 111 chr5 142874386 142874765 -60210767 - MER7A DNA MER2_type 0 346 1 228 200 17 33 chr5 142874765 142874794 -60210738 + (CATA)n Simple_repeat Simple_repeat 32 61 0 288 273 26 0 chr5 142874972 142875049 -60210483 + MIR3 SINE MIR 122 200 -8 321 317 226 39 chr5 142875108 142875316 -60210216 - MIR SINE MIR -13 249 3 1588 229 101 7 chr5 142876068 142876482 -60209050 - LTR40c LTR ERVL -12 453 1 29 70 0 0 chr5 142876975 142877032 -60208500 + AT_rich Low_complexity Low_complexity 1 57 0 287 256 0 13 chr5 142878041 142878119 -60207413 - MIR SINE MIR -12 250 174 536 318 19 9 chr5 142878411 142878625 -60206907 - MER102b DNA MER1_type 0 341 126 334 38 19 19 chr5 142878726 142878779 -60206753 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 2072 96 0 0 chr5 142878779 142879050 -60206482 - AluY SINE Alu -38 273 3 2067 125 34 0 chr5 142879052 142879349 -60206183 - AluSx SINE Alu -5 307 1 763 220 11 23 chr5 142879379 142879556 -60205976 + MER5B DNA MER1_type 1 175 -3 265 333 204 7 chr5 142879578 142879725 -60205807 + MER5A DNA MER1_type 14 189 0 552 270 29 11 chr5 142879774 142879948 -60205584 - MER5B DNA MER1_type 0 178 2 194 235 29 44 chr5 142880216 142880284 -60205248 - MER5B DNA MER1_type -2 176 110 245 240 33 83 chr5 142880467 142880588 -60204944 + MIR SINE MIR 109 223 -39 226 175 100 0 chr5 142881321 142881361 -60204171 - L2 LINE L2 -81 3232 3189 3328 156 50 10 chr5 142881809 142882812 -60202720 - L1MA8 LINE L1 -391 5900 4866 1775 190 0 0 chr5 142882904 142883194 -60202338 - AluSx SINE Alu -20 292 3 309 271 118 65 chr5 142883960 142884189 -60201343 + L1ME LINE L1 5407 5647 -474 387 233 69 26 chr5 142884316 142884432 -60201100 - L2 LINE L2 -7 3306 3186 413 281 140 18 chr5 142884993 142885157 -60200375 - MER5A DNA MER1_type -5 184 1 202 231 39 19 chr5 142886717 142886769 -60198763 + L2 LINE L2 3254 3306 -7 463 261 9 0 chr5 142886917 142887028 -60198504 - MIR3 SINE MIR -1 207 96 1511 223 82 32 chr5 142887380 142887792 -60197740 + MSTB2 LTR MaLR 23 455 -2 6084 93 30 9 chr5 142887856 142889382 -60196150 + L1PA10 LINE L1 4615 6168 0 24 0 0 0 chr5 142889638 142889662 -60195870 + AT_rich Low_complexity Low_complexity 1 24 0 233 323 144 24 chr5 142890541 142890708 -60194824 - L3b LINE CR1 -74 1509 1323 264 284 25 25 chr5 142890929 142891010 -60194522 - L2 LINE L2 0 3313 3233 481 279 64 55 chr5 142891163 142891339 -60194193 - L1ME3A LINE L1 -22 6148 5968 5089 52 3 0 chr5 142891339 142891969 -60193563 - L1PA5 LINE L1 -3 6151 5520 481 279 64 55 chr5 142891969 142892011 -60193521 - L1ME3A LINE L1 -202 5968 5928 777 295 20 12 chr5 142892021 142892265 -60193267 - L1ME3A LINE L1 -399 5771 5526 1278 162 118 25 chr5 142892569 142892884 -60192648 - L1MD3 LINE L1 0 7995 7652 382 202 56 0 chr5 142892888 142892977 -60192555 + MLT1E1 LTR MaLR 26 119 -535 180 364 100 0 chr5 142893396 142893536 -60191996 + MIR SINE MIR 48 201 -61 225 0 0 0 chr5 142895103 142895128 -60190404 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 238 352 96 16 chr5 142896089 142896214 -60189318 - L2 LINE L2 -8 3305 3171 5361 135 33 15 chr5 142897054 142898036 -60187496 - L1MA8 LINE L1 0 7710 6707 2543 221 56 48 chr5 142898043 142898882 -60186650 - L1ME1 LINE L1 -7 6159 5314 * 21283 98 13 14 chr5 142898878 142902641 -60182891 - L1PA7 LINE L1 -5 6464 2693 2312 93 0 17 chr5 142902641 142902943 -60182589 - AluY SINE Alu -14 297 1 21283 98 13 14 chr5 142902943 142904921 -60180611 - L1PA7 LINE L1 -3776 2693 714 723 190 55 13 chr5 142904910 142905225 -60180307 - L1MA8 LINE L1 -1202 6363 5907 * 1728 212 137 19 chr5 142905212 142905849 -60179683 - L1MA8 LINE L1 -3959 3606 2895 1141 227 101 30 chr5 142905978 142906384 -60179148 - L1ME2 LINE L1 -66 6098 5664 448 354 48 0 chr5 142906422 142906628 -60178904 - L1MEc LINE L1 -6013 383 168 981 146 13 0 chr5 142906630 142906781 -60178751 - MER50 LTR ERV1 0 734 582 7549 32 0 1 chr5 142906781 142907678 -60177854 - L1PA3 LINE L1 0 6155 5260 1264 249 159 35 chr5 142907678 142908187 -60177345 - MER50 LTR ERV1 -162 572 1 328 222 35 118 chr5 142908305 142908508 -60177024 - L1MEc LINE L1 -5207 1427 1110 2144 219 63 21 chr5 142908587 142909339 -60176193 + MER21B LTR ERV1 1 858 -5 5497 128 9 7 chr5 142909605 142911405 -60174127 - L1PA13 LINE L1 -15 6148 4330 13054 200 44 24 chr5 142911408 142914174 -60171358 - L1PA12 LINE L1 -148 6671 3961 1872 170 3 0 chr5 142914174 142914468 -60171064 - AluSx SINE Alu -17 295 1 13054 200 44 24 chr5 142914468 142916691 -60168841 - L1PA12 LINE L1 -2858 3961 2 280 340 21 0 chr5 142917158 142917255 -60168277 - L1MEc LINE L1 -6157 668 570 24 32 0 0 chr5 142917496 142917527 -60168005 + AT_rich Low_complexity Low_complexity 1 31 0 230 330 97 44 chr5 142918196 142918402 -60167130 + L2 LINE L2 2510 2726 -588 185 342 63 0 chr5 142918899 142918978 -60166554 - L2 LINE L2 -2 3311 3228 219 257 10 89 chr5 142919242 142919343 -60166189 - L2 LINE L2 -458 2856 2764 300 282 173 9 chr5 142919346 142919456 -60166076 - MER5A DNA MER1_type -1 188 61 379 129 0 44 chr5 142922072 142922140 -60163392 - MER5A DNA MER1_type -118 71 4 429 354 51 42 chr5 142922145 142922476 -60163056 - L2 LINE L2 -547 2767 2434 23 0 0 0 chr5 142923735 142923758 -60161774 + AT_rich Low_complexity Low_complexity 1 23 0 283 367 5 8 chr5 142924654 142924784 -60160748 + MIR SINE MIR 21 111 -97 317 319 11 0 chr5 142925416 142925507 -60160025 - L2 LINE L2 -5 3267 3176 741 291 11 11 chr5 142925708 142925897 -60159635 + MIR SINE MIR 1 189 -73 189 344 11 11 chr5 142926209 142926302 -60159230 - L2 LINE L2 -800 2514 2422 2059 120 3 19 chr5 142927079 142927412 -60158120 - AluSx SINE Alu 0 312 6 651 280 22 11 chr5 142927473 142927655 -60157877 - L1ME1 LINE L1 -65 6101 5918 1325 231 54 8 chr5 142927699 142928085 -60157447 - L1MC3 LINE L1 -167 7618 7215 328 138 128 101 chr5 142928087 142928188 -60157344 - MLT1F1 LTR MaLR -420 147 41 3035 109 86 60 chr5 142928188 142928773 -60156759 + MER4A LTR ERV1 1 600 0 769 159 80 0 chr5 142928789 142928952 -60156580 - L1MC3 LINE L1 -703 7082 6907 719 266 0 0 chr5 142928964 142929163 -60156369 - L1MCa LINE L1 -2085 4341 4143 2259 145 22 32 chr5 142929166 142929573 -60155959 - MER61D LTR ERV1 0 501 99 1484 233 55 88 chr5 142929591 142930326 -60155206 - L1MCa LINE L1 -2286 4140 3446 2270 161 108 95 chr5 142930326 142931008 -60154524 - LTR8 LTR ERV1 0 691 1 1484 233 55 88 chr5 142931008 142931299 -60154233 - L1MCa LINE L1 -2980 3446 3147 516 278 68 28 chr5 142931318 142931566 -60153966 - L1MB7 LINE L1 -25 6159 5902 * 1874 219 46 72 chr5 142931560 142932167 -60153365 - L1MCa LINE L1 -3256 3170 2597 1694 153 60 38 chr5 142932167 142932534 -60152998 + THE1C LTR MaLR 1 375 0 1874 219 46 72 chr5 142932534 142932784 -60152748 - L1MCa LINE L1 -3829 2597 2342 39374 45 5 4 chr5 142932900 142938609 -60146923 - L1PA4 LINE L1 -3 6152 439 17364 159 32 80 chr5 142938625 142939114 -60146418 + L1M1 LINE L1 13 524 -7041 553 191 0 0 chr5 142939114 142939208 -60146324 + FLAM_C SINE Alu 36 129 -14 17364 159 32 80 chr5 142939208 142941381 -60144151 + L1M1 LINE L1 524 2534 -5031 405 0 0 0 chr5 142941381 142941426 -60144106 + (ATTAG)n Simple_repeat Simple_repeat 3 47 0 17364 159 32 80 chr5 142941426 142942469 -60143063 + L1M1 LINE L1 2534 3626 -3939 4653 185 36 2 chr5 142942647 142943526 -60142006 - Tigger7 DNA MER2_type -1578 909 1 1137 211 0 0 chr5 142944109 142944318 -60141214 - Tigger7 DNA MER2_type -433 300 92 21 0 0 0 chr5 142945464 142945485 -60140047 + AT_rich Low_complexity Low_complexity 1 21 0 242 189 0 0 chr5 142945926 142945963 -60139569 + L2 LINE L2 3201 3237 -35 638 187 7 50 chr5 142946218 142946357 -60139175 - FLAM_A SINE Alu 0 133 1 1950 201 66 29 chr5 142946721 142947208 -60138324 + MLT1D LTR MaLR 1 505 0 904 173 45 22 chr5 142948158 142948337 -60137195 + MER5A DNA MER1_type 7 189 0 27 62 0 0 chr5 142949368 142949416 -60136116 + AT_rich Low_complexity Low_complexity 1 48 0 296 355 87 20 chr5 142949749 142950048 -60135484 + L2 LINE L2 1756 2074 -1240 311 218 7 150 chr5 142951628 142951775 -60133757 - L1MEc LINE L1 -4118 2445 2320 246 209 58 12 chr5 142951860 142951946 -60133586 - L1MEc LINE L1 -5030 1354 1265 298 300 76 50 chr5 142952058 142952521 -60133011 + L1ME3A LINE L1 4742 5216 -930 31 44 0 0 chr5 142953184 142953229 -60132303 + AT_rich Low_complexity Low_complexity 1 45 0 239 298 175 9 chr5 142953369 142953483 -60132049 + MIR SINE MIR 8 140 -122 249 341 55 0 chr5 142953871 142953962 -60131570 - MER5A DNA MER1_type -84 105 10 429 20 0 0 chr5 142954819 142954869 -60130663 + (TG)n Simple_repeat Simple_repeat 2 51 0 521 256 22 0 chr5 142955095 142955232 -60130300 + MLT1I LTR MaLR 3 142 -267 2064 173 45 17 chr5 142955236 142955658 -60129874 + Tigger2a DNA MER2_type 1 434 0 287 244 24 12 chr5 142955731 142955813 -60129719 + MLT1I LTR MaLR 309 391 -18 672 306 48 22 chr5 142956594 142957101 -60128431 + L1ME3A LINE L1 5352 5873 -297 25 31 0 0 chr5 142957139 142957171 -60128361 + AT_rich Low_complexity Low_complexity 1 32 0 235 289 29 10 chr5 142957478 142957582 -60127950 - L1ME LINE L1 -248 5873 5768 300 329 155 5 chr5 142957661 142957868 -60127664 - MIR SINE MIR 0 262 25 290 311 68 20 chr5 142957959 142958107 -60127425 + MLT1J2 LTR MaLR 3 157 -293 198 0 0 0 chr5 142958369 142958391 -60127141 + (A)n Simple_repeat Simple_repeat 1 22 0 376 290 76 14 chr5 142958773 142958918 -60126614 + MIR SINE MIR 48 201 -61 1527 221 96 48 chr5 142958927 142959407 -60126125 + MLT1D LTR MaLR 3 505 0 342 306 43 93 chr5 142959867 142960125 -60125407 + MIR SINE MIR 4 248 -14 422 332 15 25 chr5 142960884 142961080 -60124452 + MLT1L LTR MaLR 201 394 -221 3823 137 57 37 chr5 142961320 142961348 -60124184 + Tigger2 DNA MER2_type 1 27 -2691 1911 61 140 47 chr5 142961348 142961627 -60123905 + AluSq SINE Alu 1 305 -8 3823 137 57 37 chr5 142961627 142962041 -60123491 + Tigger2 DNA MER2_type 27 466 -2252 2184 106 13 7 chr5 142962041 142962342 -60123190 + AluSx SINE Alu 1 303 -9 3823 137 57 37 chr5 142962342 142962633 -60122899 + Tigger2 DNA MER2_type 466 750 -1968 1170 157 14 96 chr5 142962685 142962966 -60122566 + Tigger2 DNA MER2_type 2461 2718 0 972 302 204 38 chr5 142963068 142964107 -60121425 - L2 LINE L2 -1 3312 2062 1161 188 0 54 chr5 142964108 142964347 -60121185 + AluJo SINE Alu 5 230 -82 468 0 0 0 chr5 142964347 142964399 -60121133 + (A)n Simple_repeat Simple_repeat 1 52 0 448 291 183 51 chr5 142964399 142964925 -60120607 - L2 LINE L2 -1209 2105 1511 2388 61 10 3 chr5 142965618 142965912 -60119620 + AluY SINE Alu 1 296 -15 1616 291 133 79 chr5 142965921 142966173 -60119359 + L2 LINE L2 1462 1699 -1573 1008 175 0 0 chr5 142966173 142966327 -60119205 + FRAM SINE Alu 1 154 -12 1616 291 133 79 chr5 142966327 142966553 -60118979 + L2 LINE L2 1699 1911 -1361 227 200 93 27 chr5 142966553 142966628 -60118904 - MER116 DNA Mariner 0 80 1 1616 291 133 79 chr5 142966628 142967164 -60118368 + L2 LINE L2 1911 2416 -856 1143 183 24 0 chr5 142967164 142967377 -60118155 - MER20 DNA MER1_type 0 219 2 1616 291 133 79 chr5 142967377 142967960 -60117572 + L2 LINE L2 2416 3217 -55 625 250 309 16 chr5 142968624 142968996 -60116536 - L2 LINE L2 -9 3304 2824 779 189 10 95 chr5 142969032 142969231 -60116301 - L1ME2 LINE L1 -73 6097 5910 2248 110 0 0 chr5 142969231 142969523 -60116009 - AluSc SINE Alu -17 292 1 779 189 10 95 chr5 142969523 142969550 -60115982 - L1ME2 LINE L1 -260 5910 5882 722 216 69 101 chr5 142969576 142969951 -60115581 - L1ME2 LINE L1 -541 5623 5261 632 314 49 28 chr5 142969994 142970586 -60114946 - HERV16 LTR ERVL -1654 4000 3390 * 1412 315 17 32 chr5 142970583 142971278 -60114254 - HERV16 LTR ERVL -1905 3091 2612 2080 292 82 7 chr5 142971284 142971965 -60113567 - HERV16 LTR ERVL -3927 1069 338 346 284 0 0 chr5 142972261 142972335 -60113197 - LTR16A LTR ERVL 0 450 377 712 276 54 65 chr5 142972337 142972782 -60112750 - L1ME LINE L1 -4981 1089 691 1346 277 129 59 chr5 142972784 142973546 -60111986 - L2 LINE L2 -566 2748 1934 940 189 18 40 chr5 142974542 142974764 -60110768 + MER20 DNA MER1_type 3 219 0 303 301 48 103 chr5 142975658 142975970 -60109562 - L1M2 LINE L1 -5490 1359 1065 208 206 0 0 chr5 142976140 142976174 -60109358 + C-rich Low_complexity Low_complexity 5 38 0 1373 114 57 11 chr5 142977088 142977350 -60108182 - L1MA4 LINE L1 -1 6299 6026 23 33 0 0 chr5 142978206 142978236 -60107296 + AT_rich Low_complexity Low_complexity 1 30 0 180 219 0 0 chr5 142978402 142978443 -60107089 + (TA)n Simple_repeat Simple_repeat 1 41 0 430 313 69 7 chr5 142980835 142980979 -60104553 - MIR SINE MIR -62 200 48 354 276 0 16 chr5 142981427 142981550 -60103982 + (TATATG)n Simple_repeat Simple_repeat 6 126 0 558 150 20 0 chr5 142981943 142982043 -60103489 - L1MC3 LINE L1 -6 7779 7678 920 134 134 168 chr5 142982043 142982237 -60103295 - AluJb SINE Alu 0 311 130 2015 139 3 0 chr5 142982237 142982525 -60103007 + AluSx SINE Alu 1 289 -23 920 134 134 168 chr5 142982525 142982651 -60102881 - AluJb SINE Alu -181 130 1 2482 178 38 2 chr5 142982654 142983125 -60102407 - L1MC3 LINE L1 -96 7689 7202 243 176 27 54 chr5 142983128 142983202 -60102330 - MLT1F1 LTR MaLR -439 128 57 279 291 48 52 chr5 142985612 142985901 -60099631 - L1ME4a LINE L1 -233 5888 5601 364 303 45 13 chr5 142986524 142986679 -60098853 - MIR SINE MIR -5 257 98 339 358 44 0 chr5 142987754 142987891 -60097641 - MIR3 SINE MIR -50 158 16 206 151 19 38 chr5 142988522 142988575 -60096957 + A-rich Low_complexity Low_complexity 2 53 0 1042 109 17 23 chr5 142988583 142988758 -60096774 - MER2 DNA MER2_type -143 202 29 2117 119 0 10 chr5 142989530 142989833 -60095699 - AluSx SINE Alu -10 302 3 743 264 35 0 chr5 142990253 142990454 -60095078 + MIR SINE MIR 49 256 -6 198 71 0 0 chr5 142992292 142992320 -60093212 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 266 365 0 9 chr5 142992716 142992823 -60092709 + CT-rich Low_complexity Low_complexity 3 108 0 22 0 0 0 chr5 142994256 142994278 -60091254 + AT_rich Low_complexity Low_complexity 1 22 0 580 251 101 69 chr5 142995078 142995485 -60090047 + HAL1b LINE L1 478 897 -451 21 0 0 0 chr5 142995515 142995536 -60089996 + AT_rich Low_complexity Low_complexity 1 21 0 1159 253 124 71 chr5 142995685 142996218 -60089314 - MER77 LTR ERV1 -4 601 41 268 330 32 0 chr5 142996250 142996344 -60089188 + MIR SINE MIR 55 151 -57 183 129 0 0 chr5 142996528 142996559 -60088973 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 403 230 40 54 chr5 142997134 142997282 -60088250 + MIR SINE MIR 111 256 -6 786 236 0 0 chr5 142997608 142997773 -60087759 + AluSg/x SINE Alu 135 299 -11 23 0 0 0 chr5 142998373 142998396 -60087136 + AT_rich Low_complexity Low_complexity 1 23 0 1169 210 123 13 chr5 142998695 142999005 -60086527 + MER2 DNA MER2_type 1 344 0 388 351 48 12 chr5 142999285 142999450 -60086082 + MIR SINE MIR 34 204 -58 695 293 57 45 chr5 143000333 143000579 -60084953 + MIR SINE MIR 3 251 -11 521 66 44 0 chr5 143000584 143000675 -60084857 + (ATG)n Simple_repeat Simple_repeat 1 95 0 1583 169 11 7 chr5 143000783 143001055 -60084477 + AluJb SINE Alu 1 273 -39 2787 74 28 5 chr5 143002855 143003246 -60082286 + L1PA7 LINE L1 5752 6151 -3 5415 181 30 18 chr5 143003284 143004585 -60080947 - L1 LINE L1 -1287 5819 4498 2241 218 79 54 chr5 143004586 143005852 -60079680 - L1 LINE L1 -3719 3387 2083 2104 242 79 53 chr5 143005840 143006905 -60078627 - L1 LINE L1 -4739 2298 7 * 23 33 0 0 chr5 143006916 143006946 -60078586 + AT_rich Low_complexity Low_complexity 1 30 0 1653 342 52 29 chr5 143007930 143008968 -60076564 + ERVL LTR ERVL 1842 2903 -2861 962 339 74 52 chr5 143009133 143009568 -60075964 + ERVL LTR ERVL 3190 3614 -2150 370 302 32 0 chr5 143009568 143009694 -60075838 + MER94 DNA DNA 5 134 0 962 339 74 52 chr5 143009694 143010160 -60075372 + ERVL LTR ERVL 3614 4111 -1653 749 351 93 30 chr5 143010396 143011125 -60074407 + ERVL LTR ERVL 4414 5188 -576 466 250 87 35 chr5 143011150 143011322 -60074210 + L2 LINE L2 3133 3313 0 25 31 0 0 chr5 143011545 143011577 -60073955 + AT_rich Low_complexity Low_complexity 1 32 0 518 265 190 52 chr5 143011615 143012095 -60073437 - HAL1 LINE L1 -117 2390 1845 256 293 159 69 chr5 143012203 143012668 -60072864 - HAL1 LINE L1 -726 1781 1275 1581 219 126 12 chr5 143013111 143013541 -60071991 + MLT2B1 LTR ERVL 1 479 -41 216 254 0 0 chr5 143013542 143013601 -60071931 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 189 74 0 0 chr5 143014035 143014062 -60071470 + (T)n Simple_repeat Simple_repeat 1 27 0 329 251 179 20 chr5 143015302 143015497 -60070035 - L1M4 LINE L1 -3711 2435 2210 1497 266 132 18 chr5 143015960 143016738 -60068794 - L1M4 LINE L1 -903 5243 4377 919 224 99 29 chr5 143016811 143017195 -60068337 - L1MEc LINE L1 -1306 5120 4710 672 210 0 0 chr5 143017266 143017385 -60068147 + Tigger5 DNA MER2_type 1 119 -2204 * 765 132 151 33 chr5 143017376 143017528 -60068004 + Tigger5 DNA MER2_type 2154 2323 0 3256 262 100 58 chr5 143017550 143019911 -60065621 - L1MEc LINE L1 -1832 4594 2156 2358 88 0 19 chr5 143019911 143020228 -60065304 - AluSx SINE Alu -1 311 1 3256 262 100 58 chr5 143020228 143020471 -60065061 - L1MEc LINE L1 -4270 2156 1925 755 284 128 25 chr5 143020518 143021113 -60064419 - L1MEc LINE L1 -4906 1520 865 2395 71 0 3 chr5 143021117 143021427 -60064105 - AluY SINE Alu -2 309 1 249 278 101 46 chr5 143022292 143022728 -60062804 - L1MC5 LINE L1 -30 7931 7472 342 304 131 46 chr5 143022831 143023137 -60062395 - L1MC4 LINE L1 -820 7222 6891 1067 174 81 39 chr5 143023160 143023418 -60062114 - MER58D DNA MER1_type -117 269 1 16724 42 2 1 chr5 143023581 143026428 -60059104 - L1PA5 LINE L1 0 6154 3305 22 0 0 0 chr5 143027299 143027321 -60058211 + AT_rich Low_complexity Low_complexity 1 22 0 1985 75 0 11 chr5 143027371 143027637 -60057895 - L1PA7 LINE L1 -1 6153 5891 2949 65 20 18 chr5 143027638 143028053 -60057479 + L1PA7 LINE L1 5526 5895 -259 239 306 42 7 chr5 143028393 143028537 -60056995 + L1MC4a LINE L1 2679 2827 -3319 323 302 130 30 chr5 143028544 143028905 -60056627 + L1MC4a LINE L1 3090 3486 -2660 181 209 60 45 chr5 143028950 143029017 -60056515 + MER5C DNA MER1_type 117 184 -140 234 232 131 20 chr5 143029174 143029273 -60056259 + L1MC4a LINE L1 3729 3838 -2308 243 0 0 0 chr5 143029393 143029420 -60056112 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 338 299 101 48 chr5 143029613 143029881 -60055651 + L1MC4a LINE L1 4177 4458 -1688 22 0 0 0 chr5 143030442 143030464 -60055068 + AT_rich Low_complexity Low_complexity 1 22 0 236 183 33 17 chr5 143030592 143030652 -60054880 + HsTC2 DNA Tc2 3 63 -1835 774 279 214 5 chr5 143030713 143031128 -60054404 + HsTC2 DNA Tc2 1396 1897 -1 602 322 94 16 chr5 143031179 143031691 -60053841 + L1MC4a LINE L1 5353 5904 -1904 24 67 0 0 chr5 143032662 143032707 -60052825 + AT_rich Low_complexity Low_complexity 1 45 0 288 0 0 0 chr5 143032738 143032770 -60052762 + (CA)n Simple_repeat Simple_repeat 2 33 0 528 244 34 0 chr5 143033790 143033909 -60051623 - L2 LINE L2 0 3313 3191 405 219 0 31 chr5 143034237 143034333 -60051199 - MER5A DNA MER1_type -83 106 14 410 260 160 7 chr5 143034627 143034777 -60050755 + MIR SINE MIR 73 245 -17 675 252 111 22 chr5 143034995 143035221 -60050311 - MIR SINE MIR -15 247 2 1473 208 202 0 chr5 143036530 143036847 -60048685 + MLT1D LTR MaLR 1 381 -124 279 54 0 0 chr5 143037576 143037613 -60047919 + (TG)n Simple_repeat Simple_repeat 2 38 0 899 98 15 0 chr5 143037939 143038071 -60047461 - MER85 DNA T2_type -5 134 1 1964 112 11 0 chr5 143038102 143038369 -60047163 + AluSc SINE Alu 19 288 -21 1479 198 10 17 chr5 143038897 143039190 -60046342 - MLT1D LTR MaLR -2 503 213 1485 91 48 0 chr5 143039426 143039635 -60045897 + L1PA8 LINE L1 5934 6152 -20 417 233 0 0 chr5 143040627 143040700 -60044832 + MER81 DNA DNA 42 114 0 7244 156 18 11 chr5 143040872 143042498 -60043034 - L1MA2 LINE L1 0 7723 6069 237 33 0 0 chr5 143042498 143042528 -60043004 + (TG)n Simple_repeat Simple_repeat 1 30 0 7244 156 18 11 chr5 143042528 143043250 -60042282 - L1MA2 LINE L1 -1654 6069 5353 * 17091 170 42 8 chr5 143043236 143043252 -60042280 - L1MA2 LINE L1 -4373 3192 3178 2386 121 5 5 chr5 143043252 143043624 -60041908 - L1PA10 LINE L1 -2 6166 5795 17091 170 42 8 chr5 143043624 143046693 -60038839 - L1MA2 LINE L1 -4387 3178 1 306 298 210 4 chr5 143047153 143047401 -60038131 - L1M4 LINE L1 -942 5204 4906 429 324 75 54 chr5 143047556 143048034 -60037498 - L1M4 LINE L1 -1471 4675 4188 1488 233 34 49 chr5 143048147 143048864 -60036668 - L1 LINE L1 -1621 5944 5260 198 270 0 0 chr5 143048933 143049007 -60036525 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 313 228 82 70 chr5 143049152 143049310 -60036222 + MIR SINE MIR 97 256 -6 29 0 0 0 chr5 143050115 143050144 -60035388 + AT_rich Low_complexity Low_complexity 1 29 0 5954 121 36 3 chr5 143051007 143052222 -60033310 - L1PB1 LINE L1 0 6151 4898 1485 187 3 3 chr5 143052220 143052530 -60033002 + L1PB1 LINE L1 4588 4897 -1249 * 261 401 51 14 chr5 143053855 143054209 -60031323 + L2 LINE L2 2048 2414 -900 1775 149 62 56 chr5 143054626 143054948 -60030584 + MER1B DNA MER1_type 15 338 -1 6795 116 24 25 chr5 143056002 143057180 -60028352 + L1M1 LINE L1 2498 3673 -3892 14713 151 24 34 chr5 143057180 143060083 -60025449 - L1 LINE L1 -3682 3883 1011 656 244 30 12 chr5 143060396 143060564 -60024968 + L1PA16 LINE L1 5992 6162 -4 * 3592 194 35 14 chr5 143060556 143061462 -60024070 + L1MC1 LINE L1 5124 6047 -286 219 69 0 0 chr5 143061747 143061776 -60023756 + (T)n Simple_repeat Simple_repeat 1 29 0 1456 149 51 14 chr5 143061926 143062201 -60023331 + L1MC1 LINE L1 6049 6333 0 528 264 67 86 chr5 143062958 143063079 -60022453 + L1MDb LINE L1 775 897 -5512 2327 104 0 0 chr5 143063079 143063376 -60022156 + AluSg SINE Alu 2 298 -12 528 264 67 86 chr5 143063376 143063568 -60021964 + L1MDb LINE L1 897 1082 -5327 439 231 41 7 chr5 143063597 143063744 -60021788 + L1MDb LINE L1 1142 1293 -5116 29 28 0 0 chr5 143063892 143063928 -60021604 + AT_rich Low_complexity Low_complexity 1 36 0 1102 138 58 67 chr5 143065088 143065164 -60020368 + MER7A DNA MER2_type 1 76 -2962 2062 104 13 29 chr5 143065164 143065472 -60020060 + AluSx SINE Alu 1 303 -9 1102 138 58 67 chr5 143065472 143065620 -60019912 + MER7A DNA MER2_type 76 221 -125 380 253 32 25 chr5 143065655 143065813 -60019719 + L1MDb LINE L1 1389 1547 -4859 1732 155 3 103 chr5 143065819 143065951 -60019581 + MER7A DNA MER2_type 1 145 -2893 1714 166 18 3 chr5 143065951 143066235 -60019297 - AluJb SINE Alu -24 288 1 1732 155 3 103 chr5 143066235 143066489 -60019043 + MER7A DNA MER2_type 145 346 0 328 235 83 52 chr5 143066797 143067027 -60018505 + L1M4 LINE L1 4371 4607 -1539 21 0 0 0 chr5 143067147 143067168 -60018364 + AT_rich Low_complexity Low_complexity 1 21 0 251 287 70 9 chr5 143067505 143067620 -60017912 + ERVL LTR ERVL 4357 4478 -1286 371 191 0 11 chr5 143067642 143067731 -60017801 + (TA)n Simple_repeat Simple_repeat 1 88 0 919 304 79 43 chr5 143067918 143068307 -60017225 + ERVL LTR ERVL 4763 5179 -585 2072 132 0 3 chr5 143068307 143068610 -60016922 + AluSx SINE Alu 1 302 -10 919 304 79 43 chr5 143068610 143068776 -60016756 + ERVL LTR ERVL 5179 5338 -426 218 32 32 0 chr5 143069068 143069099 -60016433 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 553 339 47 65 chr5 143069149 143069703 -60015829 + LTR67 LTR ERVL 3 546 -11 5715 143 29 18 chr5 143070508 143070554 -60014978 + L1MC1 LINE L1 5285 5329 -1004 1642 186 7 17 chr5 143070554 143070850 -60014682 + AluJb SINE Alu 1 293 -19 5715 143 29 18 chr5 143070850 143071822 -60013710 + L1MC1 LINE L1 5329 6315 -18 378 43 0 0 chr5 143071878 143071925 -60013607 - MADE1 DNA Mariner -33 47 1 251 271 17 0 chr5 143072206 143072265 -60013267 - MIR SINE MIR 0 262 203 1577 167 21 62 chr5 143072278 143072614 -60012918 - L1PB4 LINE L1 -12 6144 5823 6217 216 15 19 chr5 143072619 143074120 -60011412 + L1 LINE L1 3365 4859 -1287 331 183 44 44 chr5 143074123 143074303 -60011229 + (TTAA)n Simple_repeat Simple_repeat 1 180 0 212 203 31 62 chr5 143074304 143074368 -60011164 - MIR SINE MIR -58 204 143 * 342 307 44 7 chr5 143074354 143074491 -60011041 + L2 LINE L2 3172 3313 0 434 331 7 0 chr5 143074492 143074628 -60010904 - MIR SINE MIR -122 140 4 414 331 148 10 chr5 143074698 143075003 -60010529 + L1ME4a LINE L1 5550 5896 -225 423 0 0 0 chr5 143075088 143075135 -60010397 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr5 143075268 143075289 -60010243 + AT_rich Low_complexity Low_complexity 1 21 0 42512 50 6 1 chr5 143075289 143081400 -60004132 - L1PA4 LINE L1 -11 6144 4 204 296 14 0 chr5 143082319 143082390 -60003142 + (TTCA)n Simple_repeat Simple_repeat 3 74 0 5236 82 24 11 chr5 143084168 143084351 -60001181 - MER4E LTR ERV1 0 766 587 1603 157 0 8 chr5 143084351 143084600 -60000932 + AluSx SINE Alu 56 302 -10 5236 82 24 11 chr5 143084600 143085172 -60000360 - MER4E LTR ERV1 -179 587 1 476 244 184 40 chr5 143085512 143085769 -59999763 + L1ME LINE L1 26 326 -5744 834 306 25 12 chr5 143085795 143086118 -59999414 + L1ME LINE L1 386 712 -5358 * 1046 252 76 91 chr5 143086116 143086921 -59998611 + L1M4 LINE L1 4298 5085 -1061 13412 32 1 1 chr5 143086921 143089293 -59996239 - L1PA5 LINE L1 -14 6140 3772 1046 252 76 91 chr5 143089293 143089557 -59995975 + L1M4 LINE L1 5085 5351 -795 20290 121 19 25 chr5 143089852 143090912 -59994620 - L1PA8A LINE L1 -20 6426 5362 2248 120 0 0 chr5 143090912 143091221 -59994311 - AluY SINE Alu -2 309 1 20290 121 19 25 chr5 143091221 143094330 -59991202 - L1PA8A LINE L1 -1084 5362 2285 2546 158 82 19 chr5 143094351 143094864 -59990668 - LTR10A LTR ERV1 -64 545 1 233 136 45 0 chr5 143094886 143094930 -59990602 - LTR10B LTR ERV1 -496 51 6 7685 180 7 36 chr5 143094936 143095944 -59989588 - L1PA8A LINE L1 -4179 2282 1246 2385 65 0 7 chr5 143095944 143096238 -59989294 - AluY SINE Alu -19 292 1 7685 180 7 36 chr5 143096238 143097506 -59988026 - L1PA8A LINE L1 -5215 1246 5 464 350 46 41 chr5 143097509 143098015 -59987517 - ERVL LTR ERVL -2063 3701 3125 386 350 100 0 chr5 143098275 143098475 -59987057 - ERVL LTR ERVL -3487 2277 2058 17236 35 1 0 chr5 143100808 143103696 -59981836 + L1PA3 LINE L1 3255 6159 0 2137 123 3 7 chr5 143103938 143104248 -59981284 - AluSx SINE Alu -3 309 1 26 30 0 0 chr5 143104306 143104339 -59981193 + AT_rich Low_complexity Low_complexity 1 33 0 394 189 0 14 chr5 143104628 143104702 -59980830 - Charlie1 DNA MER1_type 0 2761 2689 * 811 242 25 10 chr5 143104689 143104851 -59980681 - Charlie1 DNA MER1_type -2504 257 70 21 0 0 0 chr5 143104851 143104872 -59980660 + AT_rich Low_complexity Low_complexity 1 21 0 811 242 25 10 chr5 143104872 143104887 -59980645 - Charlie1 DNA MER1_type -2691 70 57 3460 65 0 11 chr5 143105033 143105492 -59980040 - L1PA7 LINE L1 -3 6151 5698 2114 76 22 0 chr5 143105492 143105834 -59979698 + L1P3 LINE L1 5086 5432 -740 236 212 15 0 chr5 143105893 143105959 -59979573 + (TA)n Simple_repeat Simple_repeat 2 68 0 2133 138 0 0 chr5 143106800 143107105 -59978427 + AluSg SINE Alu 3 307 -3 4191 169 39 9 chr5 143107554 143108490 -59977042 - L1M1 LINE L1 -743 6465 5546 1360 143 0 0 chr5 143108490 143108686 -59976846 - AluSx SINE Alu -12 300 105 4333 181 28 48 chr5 143108686 143108944 -59976588 - L1M1 LINE L1 -1680 5528 5266 2199 109 0 0 chr5 143108944 143109237 -59976295 - AluY SINE Alu -18 293 1 4333 181 28 48 chr5 143109237 143110045 -59975487 - L1M1 LINE L1 -1942 5266 4483 624 218 6 6 chr5 143110051 143110207 -59975325 - L1M1 LINE L1 -3009 4199 4044 1845 108 87 54 chr5 143110207 143110541 -59974991 - THE1B LTR MaLR -19 345 1 11621 89 6 2 chr5 143110541 143112115 -59973417 - THE1B-int LTR MaLR 0 1580 1 1959 115 73 53 chr5 143112115 143112472 -59973060 - THE1B LTR MaLR 0 364 1 4158 236 237 8 chr5 143112498 143113953 -59971579 - L1M1 LINE L1 -5435 1774 1 1152 261 23 43 chr5 143115316 143115665 -59969867 + MLT1H LTR MaLR 3 344 -205 27 29 0 0 chr5 143115939 143115973 -59969559 + AT_rich Low_complexity Low_complexity 1 34 0 672 312 84 61 chr5 143116975 143117580 -59967952 - L1M4 LINE L1 -2322 3824 3206 706 135 0 0 chr5 143117613 143117717 -59967815 - AluSx SINE Alu -209 104 1 1522 150 4 16 chr5 143117748 143117994 -59967538 + AluSx SINE Alu 59 301 -11 292 257 162 23 chr5 143118061 143118326 -59967206 - L1M4 LINE L1 -3243 2903 2602 370 184 44 73 chr5 143118487 143118538 -59966994 - L1M4 LINE L1 -3802 2344 2293 2393 84 48 3 chr5 143118538 143118873 -59966659 - L1PA6 LINE L1 -4 6150 5801 370 184 44 73 chr5 143118873 143118957 -59966575 - L1M4 LINE L1 -3853 2293 2213 1117 309 185 24 chr5 143119218 143119937 -59965595 + L2 LINE L2 1632 2466 -848 585 274 0 20 chr5 143120442 143120588 -59964944 + MER20 DNA MER1_type 2 144 -75 17942 174 51 8 chr5 143120588 143123974 -59961558 + L1MA2 LINE L1 15 3252 -4471 1942 166 3 0 chr5 143123974 143124317 -59961215 + L1PA14 LINE L1 5817 6160 -1 17942 174 51 8 chr5 143124317 143128323 -59957209 + L1MA2 LINE L1 3252 7723 0 319 239 11 23 chr5 143128349 143128437 -59957095 + MER20 DNA MER1_type 133 219 0 1053 311 81 40 chr5 143128444 143129178 -59956354 + L2 LINE L2 2544 3312 -1 2108 103 0 32 chr5 143132388 143132700 -59952832 + AluY SINE Alu 1 302 -9 21 0 0 0 chr5 143133317 143133338 -59952194 + AT_rich Low_complexity Low_complexity 1 21 0 865 287 86 46 chr5 143133702 143134075 -59951457 - LTR16C LTR ERVL -15 476 89 647 356 123 29 chr5 143134148 143134837 -59950695 - L2 LINE L2 -337 2977 2224 8095 202 109 29 chr5 143136220 143140300 -59945232 - L1MA8 LINE L1 -72 6455 926 342 210 168 29 chr5 143140366 143140603 -59944929 - L1M4 LINE L1 -663 5511 5257 1807 210 108 83 chr5 143140624 143141542 -59943990 - L1M4 LINE L1 -945 5201 4261 274 243 14 0 chr5 143141563 143141633 -59943899 + L1MC5 LINE L1 7813 7883 -78 5269 174 46 31 chr5 143142463 143142816 -59942716 + L1 LINE L1 4182 4528 -1618 2088 91 42 11 chr5 143142816 143143103 -59942429 + AluY SINE Alu 1 296 -15 5269 174 46 31 chr5 143143103 143143916 -59941616 + L1 LINE L1 4528 5366 -780 1635 117 84 17 chr5 143143911 143144210 -59941322 + L1MA2 LINE L1 5944 6262 -42 * 28 71 0 0 chr5 143144579 143144635 -59940897 + AT_rich Low_complexity Low_complexity 1 56 0 24 53 0 0 chr5 143144733 143144771 -59940761 + AT_rich Low_complexity Low_complexity 1 38 0 2266 104 0 0 chr5 143146123 143146422 -59939110 - AluSx SINE Alu -13 299 1 21 57 0 0 chr5 143146437 143146472 -59939060 + AT_rich Low_complexity Low_complexity 1 35 0 218 335 127 6 chr5 143146556 143146714 -59938818 + L2 LINE L2 3135 3311 -2 2627 163 199 69 chr5 143147930 143148685 -59936847 + L1MCa LINE L1 182 1034 -5392 2270 96 7 3 chr5 143150383 143150686 -59934846 - AluSq SINE Alu -9 304 1 1164 167 4 21 chr5 143154824 143155058 -59930474 - L1MA4A LINE L1 -174 6129 5900 * 6083 174 47 9 chr5 143155048 143156446 -59929086 + L1MB8 LINE L1 4102 5560 -740 462 254 21 58 chr5 143156681 143156870 -59928662 + L1M4b LINE L1 1205 1386 -5473 1304 232 71 44 chr5 143156878 143156997 -59928535 + L1M4b LINE L1 1505 1619 -5338 2005 104 13 7 chr5 143156997 143157295 -59928237 + AluSp SINE Alu 1 300 -13 1304 232 71 44 chr5 143157295 143157347 -59928185 + L1M4b LINE L1 1619 1668 -5289 2063 99 3 45 chr5 143157347 143157661 -59927871 + AluSx SINE Alu 1 301 -11 225 0 0 0 chr5 143157663 143157688 -59927844 + (GA)n Simple_repeat Simple_repeat 2 26 0 1304 232 71 44 chr5 143157688 143158086 -59927446 + L1M4b LINE L1 1668 2579 -4378 667 140 49 14 chr5 143158114 143158257 -59927275 + L1MB8 LINE L1 6012 6159 -19 325 300 54 36 chr5 143158596 143158819 -59926713 + L1M4b LINE L1 3652 3878 -3079 1828 205 2 11 chr5 143158922 143159398 -59926134 + MER77 LTR ERV1 1 523 -82 730 242 122 46 chr5 143159827 143160303 -59925229 + L1M4b LINE L1 3841 4352 -2605 207 363 117 18 chr5 143160428 143160701 -59924831 - L2 LINE L2 -740 2574 2275 356 289 107 47 chr5 143160919 143161244 -59924288 - MLT1L LTR MaLR -223 392 3 302 302 158 29 chr5 143163619 143163863 -59921669 - L1MC/D LINE L1 -2000 5808 5597 1994 108 0 54 chr5 143163863 143164179 -59921353 + AluSx SINE Alu 1 299 -13 302 302 158 29 chr5 143164179 143164344 -59921188 - L1MC/D LINE L1 -2211 5597 5346 381 287 17 43 chr5 143164984 143165099 -59920433 - L2 LINE L2 -2 3311 3200 231 333 132 0 chr5 143165302 143165431 -59920101 - MIR SINE MIR -59 203 58 294 304 152 0 chr5 143165549 143165661 -59919871 + MIR SINE MIR 58 186 -76 29 0 0 0 chr5 143168356 143168385 -59917147 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 143168786 143168821 -59916711 + AT_rich Low_complexity Low_complexity 1 35 0 451 251 5 35 chr5 143169089 143169281 -59916251 + MIR SINE MIR 11 262 0 392 256 0 32 chr5 143171030 143171186 -59914346 + HAL1b LINE L1 681 831 -517 1826 153 58 6 chr5 143173459 143173786 -59911746 + MER2 DNA MER2_type 1 344 0 2046 122 26 7 chr5 143173835 143174139 -59911393 + AluSx SINE Alu 3 312 0 24 67 0 0 chr5 143174205 143174250 -59911282 + AT_rich Low_complexity Low_complexity 1 45 0 2191 98 0 3 chr5 143175816 143176103 -59909429 + AluSg SINE Alu 1 286 -24 2134 108 10 0 chr5 143176244 143176539 -59908993 + AluSx SINE Alu 1 298 -14 562 256 135 75 chr5 143177016 143177363 -59908169 + MLT1J LTR MaLR 100 467 -44 1210 124 6 0 chr5 143177603 143177781 -59907751 - AluSp SINE Alu -14 299 121 1610 245 176 0 chr5 143178875 143179352 -59906180 + MLT1F1 LTR MaLR 1 561 -6 301 42 21 21 chr5 143179352 143179400 -59906132 + (TA)n Simple_repeat Simple_repeat 1 48 0 387 281 169 6 chr5 143180117 143180277 -59905255 - MER5A DNA MER1_type 0 189 4 232 258 45 0 chr5 143180501 143180567 -59904965 - L1MEc LINE L1 -4702 1694 1626 416 196 54 27 chr5 143180608 143180720 -59904812 + FRAM SINE Alu 39 153 -13 24 0 0 0 chr5 143180763 143180787 -59904745 + AT_rich Low_complexity Low_complexity 1 24 0 249 243 40 14 chr5 143181293 143181367 -59904165 - L1MC4 LINE L1 -1024 7018 6943 208 267 27 27 chr5 143181931 143182006 -59903526 - L2 LINE L2 -1346 1968 1894 22 0 0 0 chr5 143182391 143182413 -59903119 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr5 143183999 143184032 -59901500 + AT_rich Low_complexity Low_complexity 1 33 0 3795 166 83 65 chr5 143184382 143184575 -59900957 + MER4D LTR ERV1 1 189 -714 2138 82 34 0 chr5 143184575 143184867 -59900665 + AluY SINE Alu 1 302 -9 3795 166 83 65 chr5 143184867 143185095 -59900437 + MER4D LTR ERV1 189 412 -491 1879 124 4 4 chr5 143185095 143185368 -59900164 + AluSg SINE Alu 28 300 -10 3795 166 83 65 chr5 143185368 143185817 -59899715 + MER4D LTR ERV1 412 887 -16 3008 265 46 22 chr5 143186161 143187077 -59898455 - HERVL40 LTR ERVL -898 4632 3695 329 67 22 0 chr5 143187092 143187137 -59898395 - HERVL40 LTR ERVL -5075 455 410 1722 137 49 82 chr5 143187393 143187781 -59897751 - THE1C LTR MaLR 0 375 1 28 0 0 0 chr5 143188795 143188823 -59896709 + AT_rich Low_complexity Low_complexity 1 28 0 273 237 75 32 chr5 143190797 143190890 -59894642 + MIR SINE MIR 160 256 -6 839 148 0 0 chr5 143191290 143191418 -59894114 + FLAM_A SINE Alu 4 131 -2 226 281 70 26 chr5 143191958 143192072 -59893460 - MIR SINE MIR -68 194 76 309 401 42 26 chr5 143192810 143193074 -59892458 + L1ME3A LINE L1 530 797 -5322 376 263 143 30 chr5 143193122 143193757 -59891775 + L1ME3A LINE L1 854 1857 -4273 39 50 0 0 chr5 143193923 143193983 -59891549 + AT_rich Low_complexity Low_complexity 1 60 0 375 135 0 0 chr5 143194014 143194079 -59891453 + Alu SINE Alu 245 300 0 839 228 77 35 chr5 143194080 143194305 -59891227 + L1MC4 LINE L1 7631 7870 -172 1517 145 47 76 chr5 143194305 143194622 -59890910 - AluJb SINE Alu -2 310 3 839 228 77 35 chr5 143194622 143194655 -59890877 + L1MC4 LINE L1 7870 7900 -142 716 276 118 21 chr5 143195408 143195574 -59889958 + L1ME3A LINE L1 2835 2984 -3145 1136 30 0 0 chr5 143195574 143195708 -59889824 + L1PA4 LINE L1 6011 6144 -11 716 276 118 21 chr5 143195708 143196100 -59889432 + L1ME3A LINE L1 2984 3447 -2682 355 338 0 23 chr5 143196302 143196435 -59889097 + L1ME3A LINE L1 5076 5205 -924 576 262 101 31 chr5 143196495 143196875 -59888657 + L1ME3A LINE L1 5612 6057 -96 2287 73 38 83 chr5 143197736 143198108 -59887424 + THE1A LTR MaLR 1 355 0 1343 192 8 4 chr5 143198225 143198465 -59887067 + AluJo SINE Alu 42 282 -30 1328 189 40 37 chr5 143202225 143202521 -59883011 - AluJo SINE Alu -15 297 1 1723 143 0 11 chr5 143203285 143203551 -59881981 + AluSg SINE Alu 47 309 -1 478 344 101 10 chr5 143203576 143203864 -59881668 + L2 LINE L2 1688 2001 -1313 337 344 38 6 chr5 143203874 143204034 -59881498 + L1M3d LINE L1 790 954 -5699 10214 186 65 6 chr5 143204049 143204995 -59880537 + L1MA7 LINE L1 868 1757 -5120 2035 154 0 0 chr5 143204995 143205307 -59880225 + AluSx SINE Alu 1 312 0 10214 186 65 6 chr5 143205307 143210329 -59875203 + L1MA7 LINE L1 1757 6857 -20 26 64 0 0 chr5 143210756 143210803 -59874729 + AT_rich Low_complexity Low_complexity 1 47 0 1942 120 55 7 chr5 143210846 143211138 -59874394 - AluSg SINE Alu -4 306 1 31 0 0 0 chr5 143211359 143211390 -59874142 + AT_rich Low_complexity Low_complexity 1 31 0 473 359 60 20 chr5 143211497 143211745 -59873787 - MIR SINE MIR 0 262 5 275 265 59 73 chr5 143212326 143212462 -59873070 - MIR3 SINE MIR -8 200 67 21 0 0 0 chr5 143212860 143212881 -59872651 + AT_rich Low_complexity Low_complexity 1 21 0 720 264 118 75 chr5 143213594 143214117 -59871415 + MLT1H LTR MaLR 4 549 0 3023 215 69 19 chr5 143214678 143215558 -59869974 + MER63C DNA MER1_type 4 927 -3 295 315 71 24 chr5 143217013 143217140 -59868392 - MIR SINE MIR -114 148 16 374 289 92 21 chr5 143217411 143217553 -59867979 - L2 LINE L2 -1 3312 3161 192 200 0 0 chr5 143217748 143217793 -59867739 + (TG)n Simple_repeat Simple_repeat 1 45 0 369 274 108 65 chr5 143218023 143218209 -59867323 + MIR3 SINE MIR 14 207 -1 208 174 58 35 chr5 143218260 143218346 -59867186 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 2115 117 0 0 chr5 143218524 143218853 -59866679 + AluSx SINE Alu 1 329 0 228 265 86 86 chr5 143218858 143218975 -59866557 - MIR3 SINE MIR -49 159 43 2823 3 0 0 chr5 143219384 143219688 -59865844 + AluYa5 SINE Alu 1 304 -7 1899 199 66 37 chr5 143219835 143220318 -59865214 + L1MB7 LINE L1 5657 6153 -31 353 288 98 46 chr5 143220460 143220613 -59864919 + MIR SINE MIR 10 170 -92 21 0 0 0 chr5 143220696 143220717 -59864815 + AT_rich Low_complexity Low_complexity 1 21 0 2439 104 34 8 chr5 143223193 143223548 -59861984 - THE1B LTR MaLR 0 364 1 263 114 0 0 chr5 143224704 143224739 -59860793 + U2 snRNA snRNA 1 35 -153 1082 242 78 0 chr5 143225034 143225290 -59860242 - AluJb SINE Alu -8 304 29 199 354 76 21 chr5 143225404 143225548 -59859984 - MIR3 SINE MIR -19 189 38 1332 250 90 29 chr5 143225636 143226112 -59859420 - MLT1D LTR MaLR 0 505 1 396 257 111 35 chr5 143227492 143227636 -59857896 - LTR67 LTR ERVL -401 156 2 193 98 49 0 chr5 143227996 143228037 -59857495 + (TA)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr5 143228038 143228059 -59857473 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 143228100 143228121 -59857411 + AT_rich Low_complexity Low_complexity 1 21 0 835 264 65 62 chr5 143228140 143228309 -59857223 + L1M3a LINE L1 12 179 -5776 1457 197 37 30 chr5 143228309 143228608 -59856924 + AluSx SINE Alu 1 301 -11 835 264 65 62 chr5 143228608 143228779 -59856753 + L1M3a LINE L1 179 353 -5602 276 326 57 21 chr5 143229161 143229354 -59856178 + L1M3a LINE L1 544 743 -5212 1209 335 69 29 chr5 143229359 143230291 -59855241 + MERVL LTR ERVL 2535 3096 -1900 2237 197 27 41 chr5 143230293 143230780 -59854752 - MLT2B3 LTR ERVL 0 554 75 638 363 84 27 chr5 143231050 143231795 -59853737 + MERVL LTR ERVL 3685 4474 -1011 22 0 0 0 chr5 143232192 143232214 -59853318 + AT_rich Low_complexity Low_complexity 1 22 0 301 282 99 66 chr5 143232268 143232449 -59853083 + L1MCc LINE L1 819 1005 -5418 1467 229 41 21 chr5 143232454 143232977 -59852555 + L1MCc LINE L1 1047 1591 -4887 309 338 76 40 chr5 143235349 143235873 -59849659 - L1MC/D LINE L1 -2011 5797 5255 253 380 29 5 chr5 143236322 143236527 -59849005 - HERVL LTR ERVL -1658 3996 3787 1075 294 83 19 chr5 143236685 143237104 -59848428 - HERVL LTR ERVL -3174 2590 2145 380 300 177 10 chr5 143237111 143237363 -59848169 + MLT1J2 LTR MaLR 1 301 -149 359 307 92 36 chr5 143238087 143238390 -59847142 - HERVL LTR ERVL -4132 1522 1203 253 295 16 39 chr5 143238773 143238902 -59846630 - LTR67 LTR ERVL 0 557 432 224 54 54 0 chr5 143239515 143239552 -59845980 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 245 61 122 20 chr5 143240908 143240957 -59844575 + HSMAR1 DNA Mariner 1 54 -1233 575 318 71 41 chr5 143241216 143241536 -59843996 - L2 LINE L2 -453 2861 2552 1377 116 22 0 chr5 143241536 143241761 -59843771 + L1PA8 LINE L1 5943 6172 0 575 318 71 41 chr5 143241761 143241811 -59843721 - L2 LINE L2 -762 2552 2505 2349 98 3 0 chr5 143241811 143242116 -59843416 + AluSx SINE Alu 1 306 -6 575 318 71 41 chr5 143242116 143242207 -59843325 - L2 LINE L2 -809 2505 2385 259 304 12 24 chr5 143242282 143242299 -59843233 - L1MA10 LINE L1 0 6334 6318 2386 234 81 25 chr5 143242299 143243031 -59842501 - L1ME1 LINE L1 -8 6158 5386 1104 233 45 0 chr5 143243022 143243353 -59842179 + L1M4 LINE L1 4927 5272 -874 * 2085 139 0 3 chr5 143243390 143243693 -59841839 - AluSq SINE Alu -10 303 2 1638 199 19 6 chr5 143243694 143244016 -59841516 - MER7A DNA MER2_type -22 324 1 1841 268 74 45 chr5 143244023 143244780 -59840752 - L1MEc LINE L1 -4711 1504 773 1735 197 3 0 chr5 143244780 143245070 -59840462 + AluJb SINE Alu 1 291 -21 1841 268 74 45 chr5 143245070 143245312 -59840220 - L1MEc LINE L1 -5442 773 539 5479 120 18 6 chr5 143245481 143246313 -59839219 + HSMAR2 DNA Mariner 459 1300 -2 1485 209 219 27 chr5 143246338 143246812 -59838720 + MLT1F1 LTR MaLR 3 567 0 865 274 118 0 chr5 143246812 143247118 -59838414 - L1MEc LINE L1 -6014 382 41 342 0 0 0 chr5 143249191 143249229 -59836303 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 282 103 8 chr5 143251359 143251476 -59834056 + MIR SINE MIR 91 218 -44 944 174 23 64 chr5 143252142 143252361 -59833171 + MER2 DNA MER2_type 1 210 -135 341 224 201 52 chr5 143253129 143253263 -59832269 + L2 LINE L2 3158 3311 -2 2443 67 0 22 chr5 143253334 143253647 -59831885 + AluY SINE Alu 3 308 -3 207 175 35 70 chr5 143253777 143253834 -59831698 + L2 LINE L2 2801 2855 -459 6942 60 0 0 chr5 143254329 143255483 -59830049 - L1PA6 LINE L1 0 6154 5008 398 20 0 0 chr5 143255483 143255533 -59829999 + L1PA6 LINE L1 4983 5032 -1114 247 303 90 62 chr5 143255533 143255711 -59829821 - MIR SINE MIR -74 188 6 1036 284 74 27 chr5 143256169 143256535 -59828997 - L2 LINE L2 -2 3311 2929 570 308 219 3 chr5 143256534 143256862 -59828670 - L2 LINE L2 -953 2361 1963 * 5776 123 13 11 chr5 143256862 143257965 -59827567 + L1PA14 LINE L1 5003 6161 0 1923 168 42 0 chr5 143258148 143258481 -59827051 + MER7A DNA MER2_type 2 346 0 265 175 258 62 chr5 143258583 143258680 -59826852 + L2 LINE L2 3198 3313 0 317 71 0 0 chr5 143259684 143259726 -59825806 - MADE1 DNA Mariner -38 42 1 1712 240 83 33 chr5 143259825 143260726 -59824806 + L1ME LINE L1 4707 5643 -519 912 269 110 50 chr5 143260723 143261367 -59824165 - L1ME LINE L1 -3349 2731 2049 * 21 0 0 0 chr5 143261369 143261390 -59824142 + AT_rich Low_complexity Low_complexity 1 21 0 524 203 42 0 chr5 143261536 143261654 -59823878 - MER58B DNA MER1_type -17 324 202 1436 283 72 17 chr5 143261938 143262891 -59822641 - L1ME LINE L1 -4516 1564 660 894 201 6 0 chr5 143262976 143263140 -59822392 + MER58B DNA MER1_type 177 341 0 611 273 24 38 chr5 143263140 143263349 -59822183 - L1ME LINE L1 -5472 598 393 5646 133 48 19 chr5 143263673 143265387 -59820145 + L1PA13 LINE L1 4384 6147 -16 1964 168 0 0 chr5 143265387 143265691 -59819841 - AluSx SINE Alu -8 304 1 602 211 8 0 chr5 143265720 143265843 -59819689 - L1ME LINE L1 -5941 129 6 231 311 20 33 chr5 143266407 143266558 -59818974 - L1M2 LINE L1 -4264 2585 2437 320 289 102 22 chr5 143266638 143266863 -59818669 - L1M4 LINE L1 -2115 4031 3789 1986 132 0 30 chr5 143266987 143267058 -59818474 + L1PA14 LINE L1 5838 5910 -251 2104 126 0 10 chr5 143267058 143267367 -59818165 + AluSq SINE Alu 2 307 -6 1986 132 0 30 chr5 143267367 143267628 -59817904 + L1PA14 LINE L1 5910 6160 -1 442 273 97 17 chr5 143267722 143267960 -59817572 - L1M4 LINE L1 -2634 3512 3256 357 24 0 0 chr5 143268056 143268098 -59817434 + (CA)n Simple_repeat Simple_repeat 1 42 0 411 143 26 0 chr5 143269701 143269778 -59815754 - L1MA4 LINE L1 -121 6179 6101 1252 129 0 0 chr5 143270320 143270491 -59815041 - AluSg/x SINE Alu -13 299 129 204 163 0 0 chr5 143272373 143272416 -59813116 + (CA)n Simple_repeat Simple_repeat 2 44 0 210 91 0 0 chr5 143272649 143272682 -59812850 + (CA)n Simple_repeat Simple_repeat 2 34 0 1186 164 0 0 chr5 143272703 143272886 -59812646 + AluSg/x SINE Alu 128 310 0 26 30 0 0 chr5 143274103 143274136 -59811396 + AT_rich Low_complexity Low_complexity 1 33 0 2818 3 0 0 chr5 143275380 143275682 -59809850 - AluYa5 SINE Alu -9 302 1 337 290 8 38 chr5 143276103 143276234 -59809298 - MIR SINE MIR -49 213 87 24 0 0 0 chr5 143276512 143276536 -59808996 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr5 143276709 143276729 -59808803 + (A)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr5 143277523 143277546 -59807986 + AT_rich Low_complexity Low_complexity 1 23 0 955 220 26 15 chr5 143278616 143278849 -59806683 + L1MD2 LINE L1 5402 5642 -582 1673 210 26 24 chr5 143278851 143279354 -59806178 + L1MD2 LINE L1 5794 6349 -10 1653 170 45 21 chr5 143279391 143279679 -59805853 + AluJb SINE Alu 2 296 -16 187 400 27 13 chr5 143279749 143279899 -59805633 + L2 LINE L2 963 1114 -2200 755 347 161 17 chr5 143280053 143280892 -59804640 + L2 LINE L2 1484 2443 -871 210 328 67 106 chr5 143280929 143281213 -59804319 + L2 LINE L2 2818 3090 -182 185 328 0 33 chr5 143281271 143281332 -59804200 + L2 LINE L2 3255 3313 0 21 0 0 0 chr5 143281346 143281367 -59804165 + AT_rich Low_complexity Low_complexity 1 21 0 282 288 131 19 chr5 143284016 143284176 -59801356 + MIR3 SINE MIR 30 207 -1 809 341 27 7 chr5 143284586 143284882 -59800650 - LTR16A LTR ERVL -39 411 110 23 68 0 0 chr5 143286180 143286224 -59799308 + AT_rich Low_complexity Low_complexity 1 44 0 1770 182 0 3 chr5 143287498 143287877 -59797655 + AluJb SINE Alu 1 378 0 1551 180 25 28 chr5 143289087 143289371 -59796161 - AluJb SINE Alu -25 287 5 287 351 77 83 chr5 143290342 143290812 -59794720 + L2 LINE L2 2804 3270 -2 9706 30 2 0 chr5 143291596 143293529 -59792003 + L1PA2 LINE L1 4221 6155 0 237 291 47 35 chr5 143293584 143293670 -59791862 + MIR SINE MIR 50 136 -126 346 328 40 24 chr5 143295115 143295240 -59790292 - L2 LINE L2 -4 3268 3142 777 208 22 22 chr5 143295467 143295650 -59789882 + L1ME LINE L1 5398 5580 -586 942 195 22 16 chr5 143295690 143295875 -59789657 + AluJo SINE Alu 1 186 -126 220 336 0 56 chr5 143296022 143296129 -59789403 - MER5A DNA MER1_type -84 105 5 595 268 137 52 chr5 143296219 143296641 -59788891 - L2 LINE L2 0 3313 2856 930 171 46 0 chr5 143296824 143296999 -59788533 + MER20 DNA MER1_type 37 219 0 539 240 55 14 chr5 143297200 143297346 -59788186 + MIR SINE MIR 110 261 -1 215 341 0 12 chr5 143298264 143298346 -59787186 - MIR SINE MIR -79 183 103 6394 36 5 2 chr5 143298475 143299398 -59786134 - L1PA5 LINE L1 -139 6015 5091 190 343 47 47 chr5 143300641 143300813 -59784719 - L2 LINE L2 -202 3070 2899 3215 84 2 2 chr5 143300923 143301377 -59784155 - L1P LINE L1 -807 5339 4886 293 378 18 0 chr5 143301937 143302048 -59783484 - L2 LINE L2 -31 3241 3129 1199 298 80 14 chr5 143302104 143302543 -59782989 + LTR16C LTR ERVL 4 471 -20 1656 245 32 93 chr5 143302550 143302833 -59782699 + MLT1G LTR MaLR 10 240 -350 522 0 0 0 chr5 143302833 143302891 -59782641 + (TA)n Simple_repeat Simple_repeat 2 59 0 1656 245 32 93 chr5 143302891 143303195 -59782337 + MLT1G LTR MaLR 240 561 -29 26067 38 3 1 chr5 143304154 143307376 -59778156 - L1P LINE L1 -1552 4594 1367 3121 209 54 2 chr5 143307505 143308322 -59777210 + L1 LINE L1 2955 3813 -2333 827 259 89 41 chr5 143308402 143308871 -59776661 - LTR1B LTR ERV1 -302 524 34 227 190 52 0 chr5 143308879 143308937 -59776595 - LTR1B LTR ERV1 -724 102 42 2871 215 61 60 chr5 143308953 143310078 -59775454 - HUERS-P2 LTR ERV1 0 5217 2570 565 194 10 0 chr5 143310183 143310281 -59775251 - MLT1E3 LTR MaLR -525 99 1 427 261 124 20 chr5 143310290 143310443 -59775089 + MIR SINE MIR 12 180 -82 22 35 0 0 chr5 143310453 143310482 -59775050 + AT_rich Low_complexity Low_complexity 1 29 0 1998 144 45 9 chr5 143310538 143310872 -59774660 - MER7A DNA MER2_type -1 345 2 769 85 0 0 chr5 143312007 143312113 -59773419 - AluY SINE Alu 0 311 206 188 322 0 0 chr5 143312340 143312399 -59773133 - MIR SINE MIR -27 235 177 * 315 323 11 11 chr5 143312394 143312487 -59773045 + L2 LINE L2 3146 3238 -34 616 206 46 51 chr5 143312641 143312816 -59772716 + MIR SINE MIR 18 191 -71 250 331 102 18 chr5 143313016 143313182 -59772350 + MER5A DNA MER1_type 10 189 0 241 294 7 55 chr5 143313499 143313645 -59771887 + CT-rich Low_complexity Low_complexity 4 142 0 242 212 0 12 chr5 143313681 143313766 -59771766 + CT-rich Low_complexity Low_complexity 1 84 0 432 0 0 0 chr5 143314414 143314462 -59771070 + (CA)n Simple_repeat Simple_repeat 1 48 0 198 118 0 0 chr5 143315451 143315485 -59770047 + (TC)n Simple_repeat Simple_repeat 1 34 0 256 264 83 0 chr5 143316289 143316361 -59769171 + MIR3 SINE MIR 120 197 -11 24 85 0 0 chr5 143316375 143316434 -59769098 + AT_rich Low_complexity Low_complexity 1 59 0 285 216 102 23 chr5 143317163 143317251 -59768281 + MIR3 SINE MIR 60 154 -54 1229 244 227 20 chr5 143317535 143317993 -59767539 + MLT1H1 LTR MaLR 1 553 -2 495 309 26 0 chr5 143319028 143319180 -59766352 + L2 LINE L2 2825 2980 -333 2209 133 0 0 chr5 143319181 143319482 -59766050 - AluSx SINE Alu -11 301 1 874 206 221 0 chr5 143319522 143319721 -59765811 - MIR SINE MIR -12 250 8 302 340 0 0 chr5 143319893 143319999 -59765533 - MIR SINE MIR -19 243 138 278 335 41 53 chr5 143320125 143320295 -59765237 - MIR SINE MIR -67 195 28 444 67 0 0 chr5 143320473 143320533 -59764999 + (CA)n Simple_repeat Simple_repeat 2 61 0 190 116 47 0 chr5 143320547 143320590 -59764942 + (TA)n Simple_repeat Simple_repeat 1 45 0 824 256 54 5 chr5 143321353 143321576 -59763956 + MER102b DNA MER1_type 75 308 -33 2459 220 55 27 chr5 143322371 143322695 -59762837 - L1ME1 LINE L1 -231 5935 5621 1458 193 43 7 chr5 143322695 143322996 -59762536 + AluJo SINE Alu 1 312 0 2459 220 55 27 chr5 143322996 143323839 -59761693 - L1ME1 LINE L1 -545 5621 4739 206 385 10 0 chr5 143323853 143323949 -59761583 - MIR SINE MIR -91 117 21 1898 151 20 3 chr5 143325555 143325847 -59759685 + AluSx SINE Alu 1 297 -15 1845 153 13 22 chr5 143325857 143326171 -59759361 + AluJb SINE Alu 1 311 -1 229 303 53 0 chr5 143326183 143326259 -59759273 - MIR SINE MIR -74 188 109 3452 207 80 10 chr5 143326268 143327055 -59758477 + MER52C LTR ERV1 1 842 -436 622 244 30 30 chr5 143327288 143327489 -59758043 - L1ME1 LINE L1 -2158 3988 3788 412 261 74 53 chr5 143327551 143327835 -59757697 - L1ME1 LINE L1 -3115 3031 2742 445 259 64 18 chr5 143327885 143328105 -59757427 - L1ME1 LINE L1 -3645 2501 2272 246 322 28 21 chr5 143328268 143328411 -59757121 - LTR16A1 LTR ERVL -313 144 1 1592 348 72 37 chr5 143328831 143329116 -59756416 - HERVL LTR ERVL -673 4981 4707 1679 209 19 43 chr5 143329116 143329490 -59756042 + MLT1A1 LTR MaLR 1 365 0 1592 348 72 37 chr5 143329490 143330145 -59755387 - HERVL LTR ERVL -947 4707 4076 1863 154 0 3 chr5 143330145 143330430 -59755102 + AluJb SINE Alu 1 284 -28 1592 348 72 37 chr5 143330430 143330442 -59755090 - HERVL LTR ERVL -1578 4076 4066 207 0 0 0 chr5 143330442 143330465 -59755067 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1592 348 72 37 chr5 143330465 143331049 -59754483 - HERVL LTR ERVL -1588 4066 3349 256 301 27 0 chr5 143331272 143331345 -59754187 - HERVL LTR ERVL -1900 3096 3022 355 242 11 11 chr5 143331360 143331451 -59754081 + LTR41 LTR ERVL 1 91 -682 566 255 20 13 chr5 143331652 143331805 -59753727 + LTR41 LTR ERVL 30 183 -590 422 186 157 43 chr5 143332068 143332137 -59753395 - L1MA9 LINE L1 -2 6310 6250 1818 179 0 10 chr5 143332137 143332439 -59753093 - AluJo SINE Alu -13 299 1 422 186 157 43 chr5 143332439 143332509 -59753023 - L1MA9 LINE L1 -62 6250 6155 3518 260 72 43 chr5 143332575 143333792 -59751740 - HERVL LTR ERVL -2038 2958 1706 1602 213 31 0 chr5 143333894 143334214 -59751318 - MER58B DNA MER1_type -11 330 1 722 346 56 7 chr5 143334228 143334534 -59750998 - HERVL LTR ERVL -3420 1576 1256 187 306 0 0 chr5 143334861 143334910 -59750622 + MIR SINE MIR 98 146 -62 984 319 66 46 chr5 143334927 143335426 -59750106 - LTR67 LTR ERVL -17 540 32 291 154 0 0 chr5 143335511 143335563 -59749969 + MIR3 SINE MIR 157 208 0 219 88 0 0 chr5 143335685 143335719 -59749813 + (CA)n Simple_repeat Simple_repeat 1 34 0 392 260 49 8 chr5 143336596 143336719 -59748813 + MIR SINE MIR 48 175 -87 535 302 27 40 chr5 143337059 143337275 -59748257 + LTR16B LTR ERVL 166 378 -86 2273 131 28 43 chr5 143337275 143337671 -59747861 - MLT1B LTR MaLR 0 390 1 535 302 27 40 chr5 143337671 143337755 -59747777 + LTR16B LTR ERVL 378 462 -2 352 185 46 0 chr5 143338246 143338311 -59747221 + L2 LINE L2 3241 3308 -5 437 320 142 0 chr5 143338312 143338509 -59747023 - MIR SINE MIR 0 262 38 204 256 0 0 chr5 143339102 143339145 -59746387 - L2 LINE L2 -16 3297 3255 1032 171 24 14 chr5 143339145 143339355 -59746177 + MER96B DNA MER1_type? 1 212 -205 481 335 53 5 chr5 143339484 143339672 -59745860 + MIR SINE MIR 17 213 -49 499 79 0 26 chr5 143340018 143340094 -59745438 - L1PA8 LINE L1 0 6172 6099 553 309 92 0 chr5 143340259 143340476 -59745056 + MIR SINE MIR 14 250 -12 840 168 0 0 chr5 143340485 143340616 -59744916 + FLAM_C SINE Alu 1 131 -2 2383 156 142 19 chr5 143341373 143341860 -59743672 - L1MB5 LINE L1 -1 6173 5627 2111 145 0 6 chr5 143341891 143342202 -59743330 - AluSx SINE Alu -3 309 1 425 141 0 81 chr5 143343050 143343149 -59742383 - AluSg/x SINE Alu -31 278 188 437 157 0 0 chr5 143343267 143343337 -59742195 - FLAM SINE Alu -32 111 42 4859 172 17 7 chr5 143343337 143345025 -59740507 - L1PB2 LINE L1 -179 5972 4265 1817 222 46 25 chr5 143395051 143395533 -59689999 - L1ME1 LINE L1 -289 5877 5386 1173 233 45 0 chr5 143395524 143395855 -59689677 + L1M4 LINE L1 4927 5272 -874 * 1708 196 17 42 chr5 143395859 143395892 -59689640 - MER7A DNA MER2_type -2692 346 314 2094 139 0 3 chr5 143395892 143396195 -59689337 - AluSq SINE Alu -10 303 2 1708 196 17 42 chr5 143396195 143396518 -59689014 - MER7A DNA MER2_type -2724 314 1 1957 279 56 47 chr5 143396522 143397282 -59688250 - L1MEc LINE L1 -4846 1550 777 1727 197 3 0 chr5 143397282 143397572 -59687960 + AluJb SINE Alu 1 291 -21 1957 279 56 47 chr5 143397572 143397814 -59687718 - L1MEc LINE L1 -5619 777 539 5616 120 18 6 chr5 143397983 143398815 -59686717 + HSMAR2 DNA Mariner 459 1300 -2 1515 207 219 27 chr5 143398840 143399314 -59686218 + MLT1F1 LTR MaLR 3 567 0 865 274 118 0 chr5 143399314 143399620 -59685912 - L1MEc LINE L1 -6014 382 41 342 0 0 0 chr5 143401693 143401731 -59683801 + (TG)n Simple_repeat Simple_repeat 2 39 0 346 264 59 122 chr5 143403666 143403954 -59681578 - L1M2 LINE L1 -5901 948 679 186 118 0 0 chr5 143403961 143403995 -59681537 + (CCCCCG)n Simple_repeat Simple_repeat 3 36 0 659 121 40 0 chr5 143405122 143405221 -59680311 - L1MB3 LINE L1 -13 6170 6068 470 62 0 16 chr5 143405842 143405906 -59679626 + L1PA6 LINE L1 6089 6151 -3 224 238 127 0 chr5 143406218 143406281 -59679251 + MIR3 SINE MIR 95 165 -43 199 379 57 33 chr5 143406487 143406698 -59678834 - L2 LINE L2 -210 3062 2847 21 0 0 0 chr5 143408944 143408965 -59676567 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 143409123 143409148 -59676384 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr5 143409557 143409595 -59675937 + AT_rich Low_complexity Low_complexity 1 38 0 371 346 65 12 chr5 143409914 143410255 -59675277 + HAL1 LINE L1 1300 1658 -849 2219 88 0 0 chr5 143410867 143411151 -59674381 - AluSc SINE Alu -25 284 1 248 221 81 47 chr5 143411159 143411296 -59674236 - L1MC/D LINE L1 -2363 5445 5301 1864 150 0 0 chr5 143411296 143411576 -59673956 - AluSx SINE Alu -32 280 1 248 221 81 47 chr5 143411576 143411587 -59673945 - L1MC/D LINE L1 -2507 5301 5292 21 0 0 0 chr5 143411698 143411719 -59673813 + AT_rich Low_complexity Low_complexity 1 21 0 307 307 33 10 chr5 143411936 143412106 -59673426 + L1ME LINE L1 5538 5707 -414 227 361 0 0 chr5 143413116 143413199 -59672333 - MIR3 SINE MIR -3 205 123 1020 180 0 0 chr5 143413709 143413881 -59671651 + AluJo SINE Alu 127 298 -14 444 113 52 0 chr5 143413902 143413999 -59671533 + GA-rich Low_complexity Low_complexity 1 102 0 195 42 0 0 chr5 143414013 143414037 -59671495 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 4769 107 17 6 chr5 143414052 143414774 -59670758 - L1PA13 LINE L1 -1 6162 5433 41 78 0 0 chr5 143415245 143415335 -59670197 + AT_rich Low_complexity Low_complexity 1 90 0 326 319 43 37 chr5 143415337 143415500 -59670032 + HAL1 LINE L1 1293 1456 -1051 207 0 0 0 chr5 143415593 143415616 -59669916 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 23 54 0 0 chr5 143416213 143416250 -59669282 + AT_rich Low_complexity Low_complexity 1 37 0 3022 181 44 14 chr5 143416402 143417066 -59668466 - L1MB7 LINE L1 -10 6174 5491 857 192 56 23 chr5 143417067 143417281 -59668251 - L1MB8 LINE L1 -30 6148 5928 * 2490 224 44 34 chr5 143417257 143418051 -59667481 - L1MB7 LINE L1 -687 5491 4685 1979 139 3 0 chr5 143418051 143418345 -59667187 + AluSx SINE Alu 2 296 -16 2490 224 44 34 chr5 143418345 143418438 -59667094 - L1MB7 LINE L1 -1493 4685 4594 216 297 110 34 chr5 143418763 143418921 -59666611 - MIR SINE MIR -31 177 2 1372 195 37 17 chr5 143421042 143421340 -59664192 - AluJo SINE Alu -8 304 1 287 352 104 5 chr5 143421443 143421636 -59663896 - MIR SINE MIR -1 261 50 2585 244 107 30 chr5 143421978 143423165 -59662367 + L1ME1 LINE L1 4142 5418 -753 693 256 171 14 chr5 143423162 143423537 -59661995 + L1ME1 LINE L1 5650 6100 -65 * 1921 122 31 57 chr5 143423568 143423953 -59661579 - THE1C LTR MaLR 0 375 1 302 260 0 4 chr5 143426044 143426132 -59659400 - L1 LINE L1 -844 5302 5218 572 214 29 7 chr5 143426262 143426402 -59659130 + MIR SINE MIR 64 206 -56 829 136 108 103 chr5 143426415 143426628 -59658904 - MER20 DNA MER1_type -2 217 4 410 319 14 61 chr5 143426862 143427096 -59658436 - L1ME LINE L1 -432 5689 5468 457 338 93 31 chr5 143427499 143427952 -59657580 - L1ME3 LINE L1 -212 5950 5470 4048 246 84 28 chr5 143427972 143428816 -59656716 + L1M4 LINE L1 2557 3352 -2794 1909 135 7 0 chr5 143428816 143429120 -59656412 - AluSx SINE Alu 0 306 1 4048 246 84 28 chr5 143429120 143429775 -59655757 + L1M4 LINE L1 3352 4162 -1984 261 0 0 0 chr5 143429775 143429804 -59655728 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 4048 246 84 28 chr5 143429804 143429960 -59655572 + L1M4 LINE L1 4162 4308 -1838 24 32 0 0 chr5 143430196 143430227 -59655305 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr5 143430514 143430547 -59654985 + AT_rich Low_complexity Low_complexity 1 33 0 227 208 52 26 chr5 143433272 143433349 -59652183 + MER116 DNA Mariner 1 79 -1 472 288 0 9 chr5 143433539 143433722 -59651810 + MIR SINE MIR 18 257 -5 232 294 32 87 chr5 143434476 143434602 -59650930 + L3 LINE CR1 5 123 -1454 2140 92 0 20 chr5 143434825 143435120 -59650412 - AluY SINE Alu -22 289 1 293 313 70 28 chr5 143435122 143435336 -59650196 - L1ME LINE L1 -552 5569 5347 2335 144 54 7 chr5 143435798 143436207 -59649325 - MSTA LTR MaLR 0 428 1 423 132 0 0 chr5 143436325 143436393 -59649139 + (TG)n Simple_repeat Simple_repeat 2 69 0 304 359 66 29 chr5 143437392 143437665 -59647867 + L3 LINE CR1 565 847 -730 22 0 0 0 chr5 143437797 143437819 -59647713 + AT_rich Low_complexity Low_complexity 1 22 0 1364 300 81 27 chr5 143438093 143438683 -59646849 + L2 LINE L2 1931 2552 -762 276 345 56 43 chr5 143439312 143439544 -59645988 + L3 LINE CR1 1316 1550 -27 262 351 0 36 chr5 143439537 143439648 -59645884 - L3 LINE CR1 -440 1137 1031 * 326 268 61 0 chr5 143440143 143440225 -59645307 + L2 LINE L2 3223 3309 -4 1399 308 48 67 chr5 143441052 143441876 -59643656 + L2 LINE L2 2031 2839 -475 216 239 0 99 chr5 143441999 143442070 -59643462 + L2 LINE L2 2591 2654 -660 245 355 80 22 chr5 143442707 143442845 -59642687 + L2 LINE L2 3122 3267 -5 622 235 104 35 chr5 143443326 143443615 -59641917 + Charlie8 DNA MER1_type 368 676 -1741 266 316 149 0 chr5 143444526 143444640 -59640892 + L2 LINE L2 3178 3308 -5 215 339 9 9 chr5 143444788 143444903 -59640629 + (TA)n Simple_repeat Simple_repeat 1 115 0 223 156 0 78 chr5 143444986 143445050 -59640482 + A-rich Low_complexity Low_complexity 5 63 0 436 306 38 40 chr5 143445397 143445619 -59639913 + MIR SINE MIR 4 224 -38 334 371 12 24 chr5 143446201 143446371 -59639161 + MIR3 SINE MIR 34 201 -7 184 346 168 10 chr5 143446597 143446698 -59638834 - L2 LINE L2 -17 3255 3139 1863 134 39 0 chr5 143447378 143447662 -59637870 + AluSx SINE Alu 1 295 -17 3419 155 50 0 chr5 143448226 143448681 -59636851 - L1MA8 LINE L1 -27 6264 5768 363 23 0 0 chr5 143448681 143448725 -59636807 + (CA)n Simple_repeat Simple_repeat 2 45 0 3419 155 50 0 chr5 143448725 143448887 -59636645 - L1MA8 LINE L1 -523 5768 5616 846 70 0 0 chr5 143450258 143450373 -59635159 - L1PA4 LINE L1 -3 6152 6038 32 0 0 0 chr5 143450705 143450737 -59634795 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 143451197 143451228 -59634304 + AT_rich Low_complexity Low_complexity 1 31 0 246 105 0 0 chr5 143451467 143451505 -59634027 + (TG)n Simple_repeat Simple_repeat 1 38 0 327 183 0 0 chr5 143451525 143451607 -59633925 + GA-rich Low_complexity Low_complexity 2 83 0 27 49 0 0 chr5 143454119 143454160 -59631372 + AT_rich Low_complexity Low_complexity 1 41 0 207 0 0 0 chr5 143454678 143454701 -59630831 + (TA)n Simple_repeat Simple_repeat 1 23 0 298 349 30 38 chr5 143455173 143455305 -59630227 + MIR3 SINE MIR 15 145 -63 437 288 113 17 chr5 143455536 143455713 -59629819 + MIR SINE MIR 16 209 -53 207 310 0 0 chr5 143455752 143455810 -59629722 - L2 LINE L2 -336 2977 2920 307 346 127 26 chr5 143456535 143456960 -59628572 + L2 LINE L2 1932 2399 -915 226 254 8 82 chr5 143457153 143457173 -59628359 - MIR SINE MIR -1 261 241 957 166 12 30 chr5 143457173 143457342 -59628190 + FRAM SINE Alu 1 166 0 226 254 8 82 chr5 143457342 143457455 -59628077 - MIR SINE MIR -21 241 138 7390 122 5 4 chr5 143457463 143459289 -59626243 - L1MA1 LINE L1 0 6302 4476 13069 156 19 8 chr5 143459389 143463626 -59621906 - L1 LINE L1 -1032 6533 2257 2573 209 64 2 chr5 143463632 143464162 -59621370 - L1 LINE L1 -6549 1016 454 200 269 29 77 chr5 143464293 143464397 -59621135 + L2 LINE L2 2577 2675 -639 343 326 39 51 chr5 143464483 143464661 -59620871 + MER5A DNA MER1_type 14 189 0 302 320 165 15 chr5 143465926 143466126 -59619406 - MIR SINE MIR -2 260 31 599 283 47 104 chr5 143466151 143466477 -59619055 - MLT1J LTR MaLR -179 271 1 201 147 0 0 chr5 143466738 143466772 -59618760 + (TA)n Simple_repeat Simple_repeat 2 35 0 236 213 0 64 chr5 143466778 143466872 -59618660 - L1MC4 LINE L1 -1343 6699 6612 354 138 0 0 chr5 143467009 143467067 -59618465 + (TA)n Simple_repeat Simple_repeat 2 59 0 1973 137 3 0 chr5 143467474 143467773 -59617759 + AluSx SINE Alu 1 300 -12 260 49 49 0 chr5 143467848 143467889 -59617643 + (AATAG)n Simple_repeat Simple_repeat 1 43 0 250 233 17 0 chr5 143468247 143468307 -59617225 + L1MB8 LINE L1 6113 6173 -5 265 302 38 0 chr5 143468315 143468421 -59617111 - L1ME3A LINE L1 -5 6165 6056 6345 105 16 13 chr5 143468429 143469385 -59616147 + L1P LINE L1 4407 5365 -766 368 213 0 0 chr5 143469385 143469458 -59616074 + L1PA3 LINE L1 6062 6136 -19 6345 105 16 13 chr5 143469458 143469503 -59616029 + L1P LINE L1 5365 5408 -723 1445 273 87 37 chr5 143469474 143470235 -59615297 - L1ME3A LINE L1 -114 6056 5260 * 396 281 118 15 chr5 143470712 143470847 -59614685 - MIR SINE MIR -85 177 29 240 137 0 0 chr5 143471461 143471512 -59614020 + (TATG)n Simple_repeat Simple_repeat 2 52 0 418 76 15 0 chr5 143471514 143471580 -59613952 - L1MA3 LINE L1 -6 6299 6233 22 56 0 0 chr5 143471588 143471624 -59613908 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 143472318 143472348 -59613184 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr5 143473143 143473169 -59612363 + (TTG)n Simple_repeat Simple_repeat 2 27 0 346 384 49 0 chr5 143474165 143474410 -59611122 + L1ME2 LINE L1 778 1034 -6104 512 246 38 7 chr5 143474779 143474979 -59610553 + L1ME2 LINE L1 1346 1611 -5336 368 194 41 26 chr5 143474993 143475105 -59610427 + L1M3c LINE L1 1265 1788 -4525 334 246 77 91 chr5 143475105 143475325 -59610207 + L1ME2 LINE L1 2105 2321 -4636 2501 232 94 76 chr5 143475360 143476044 -59609488 + L1ME2 LINE L1 4810 5480 -1495 1802 167 0 0 chr5 143476044 143476354 -59609178 + AluSx SINE Alu 1 310 0 2501 232 94 76 chr5 143476354 143477518 -59608014 + L1ME2 LINE L1 5480 6704 -271 2004 128 0 14 chr5 143477518 143477815 -59607717 + AluSx SINE Alu 1 293 -19 2501 232 94 76 chr5 143477815 143478083 -59607449 + L1ME2 LINE L1 6704 6966 -9 6946 37 1 2 chr5 143478107 143478990 -59606542 - L1PA3 LINE L1 -2807 3339 2458 16669 30 3 2 chr5 143478990 143481776 -59603756 + L1PA3 LINE L1 3354 6155 0 7122 36 7 0 chr5 143481776 143482630 -59602902 + L1PA4 LINE L1 5276 6147 -8 352 227 86 37 chr5 143482904 143483067 -59602465 - L1ME4a LINE L1 -59 6062 5892 403 230 108 93 chr5 143483718 143483798 -59601734 - L1ME4a LINE L1 -207 5914 5837 1980 180 98 28 chr5 143483798 143484270 -59601262 + MLT1D LTR MaLR 1 505 0 403 230 108 93 chr5 143484270 143484532 -59601000 - L1ME4a LINE L1 -284 5837 5567 362 286 86 9 chr5 143486469 143486574 -59598958 - MER91C DNA MER1_type -10 130 18 246 299 16 47 chr5 143486744 143486871 -59598661 - LTR67 LTR ERVL -2 555 433 2229 88 7 19 chr5 143487744 143488052 -59597480 - AluSp SINE Alu -9 304 1 342 354 112 28 chr5 143489208 143489625 -59595907 + L1MEd LINE L1 19 493 -5626 24 32 0 0 chr5 143489848 143489879 -59595653 + AT_rich Low_complexity Low_complexity 1 31 0 579 328 15 4 chr5 143489970 143490232 -59595300 + L1MEd LINE L1 945 1209 -4910 7122 17 0 2 chr5 143490273 143491102 -59594430 + L1PA2 LINE L1 5329 6155 0 1675 242 92 11 chr5 143491701 143492168 -59593364 + MLT1D LTR MaLR 1 505 0 6652 37 1 27 chr5 143492312 143493937 -59591595 + L1PA4 LINE L1 4577 6187 0 288 188 0 0 chr5 143494549 143494613 -59590919 + (TA)n Simple_repeat Simple_repeat 2 65 0 241 256 22 22 chr5 143494613 143494703 -59590829 - L1MC4 LINE L1 -1339 6703 6614 209 167 0 42 chr5 143494703 143494751 -59590781 + (TATATG)n Simple_repeat Simple_repeat 4 49 0 225 258 22 22 chr5 143494751 143494840 -59590692 + L1MC4 LINE L1 6614 6702 -1340 231 173 39 0 chr5 143494864 143494916 -59590616 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 143494940 143494992 -59590540 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 143495016 143495068 -59590464 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 143495054 143495106 -59590426 + L1MC4 LINE L1 6649 6702 -1340 231 173 39 0 chr5 143495130 143495182 -59590350 + L1MC4 LINE L1 6649 6702 -1340 228 236 0 0 chr5 143495206 143495261 -59590271 + L1MC4 LINE L1 6649 6703 -1339 285 151 0 0 chr5 143495266 143495319 -59590213 + (TA)n Simple_repeat Simple_repeat 1 53 0 295 289 22 0 chr5 143495326 143495416 -59590116 - L2 LINE L2 -1343 1971 1880 256 258 56 22 chr5 143495654 143495743 -59589789 - MIR SINE MIR -1 261 170 649 286 25 15 chr5 143495748 143495944 -59589588 - MIR SINE MIR -46 216 19 21 0 0 0 chr5 143496041 143496062 -59589470 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 143496901 143496926 -59588606 + AT_rich Low_complexity Low_complexity 1 25 0 935 195 128 79 chr5 143498361 143498689 -59586843 - MER2 DNA MER2_type 0 344 1 406 275 94 12 chr5 143499071 143499231 -59586301 + MLT1L LTR MaLR 430 602 -13 257 279 58 87 chr5 143499810 143499982 -59585550 - MIR SINE MIR -32 230 64 * 432 329 59 0 chr5 143499937 143500089 -59585443 + MIR SINE MIR 20 180 -82 199 291 51 25 chr5 143500162 143500241 -59585291 - MIR SINE MIR -90 118 38 253 211 113 0 chr5 143500726 143500797 -59584735 + HsTC2 DNA Tc2 22 100 -1798 1414 215 30 86 chr5 143500938 143501473 -59584059 + MLT1D LTR MaLR 1 505 0 1863 151 3 22 chr5 143501792 143502110 -59583422 + AluSx SINE Alu 1 312 0 788 287 41 21 chr5 143502393 143502731 -59582801 + L1ME LINE L1 3803 4147 -1999 408 309 105 14 chr5 143502818 143503171 -59582361 + L1ME LINE L1 4298 4682 -1464 247 231 163 81 chr5 143503514 143503674 -59581858 - MER104 DNA Tc2 0 180 8 572 299 59 38 chr5 143503721 143504142 -59581390 + L1ME LINE L1 5259 5688 -482 394 296 30 69 chr5 143504342 143504676 -59580856 - L1MEc LINE L1 -4443 2109 1777 421 268 134 29 chr5 143504843 143505089 -59580443 - L1MEc LINE L1 -5785 745 474 4793 208 81 30 chr5 143505371 143505786 -59579746 - Charlie1a DNA MER1_type -1307 1454 1062 2027 18 0 0 chr5 143505786 143506011 -59579521 + AluYb8 SINE Alu 86 310 -8 4793 208 81 30 chr5 143506011 143506273 -59579259 - Charlie1a DNA MER1_type -1699 1062 815 446 0 0 18 chr5 143506273 143506328 -59579204 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 4793 208 81 30 chr5 143506328 143507025 -59578507 - Charlie1a DNA MER1_type -1946 815 9 213 39 0 0 chr5 143507081 143507107 -59578425 + (TG)n Simple_repeat Simple_repeat 2 27 0 26 50 0 0 chr5 143508091 143508131 -59577401 + AT_rich Low_complexity Low_complexity 1 40 0 693 156 170 21 chr5 143508224 143508365 -59577167 + MLT1E3 LTR MaLR 1 162 -462 1317 109 0 5 chr5 143508380 143508572 -59576960 - AluSg/x SINE Alu -19 293 103 1194 222 8 0 chr5 143508594 143508828 -59576704 + MLT1E2 LTR MaLR 386 621 -5 321 287 98 0 chr5 143509373 143509495 -59576037 + MER94 DNA DNA 1 134 0 26 0 0 0 chr5 143509536 143509562 -59575970 + AT_rich Low_complexity Low_complexity 1 26 0 197 193 23 159 chr5 143509956 143510044 -59575488 - L2 LINE L2 -2 3270 3195 26 30 0 0 chr5 143510421 143510454 -59575078 + AT_rich Low_complexity Low_complexity 1 33 0 378 389 40 27 chr5 143510828 143511129 -59574403 + L1MDa LINE L1 25 329 -6211 4152 246 73 74 chr5 143511590 143512998 -59572534 + L1MDa LINE L1 917 2325 -4215 1642 199 0 7 chr5 143512998 143513280 -59572252 + AluJo SINE Alu 3 282 -30 4152 246 73 74 chr5 143513280 143516560 -59568972 + L1MDa LINE L1 2325 5500 -1040 185 133 0 0 chr5 143619254 143619284 -59466248 + (CA)n Simple_repeat Simple_repeat 2 31 0 2381 107 3 11 chr5 143619284 143619648 -59465884 + L1PB1 LINE L1 5791 6151 0 1695 262 110 42 chr5 143619715 143620837 -59464695 - L1MEc LINE L1 -4104 2292 1095 543 284 41 28 chr5 143621106 143621443 -59464089 - L1MCa LINE L1 -5065 1542 991 * 9954 172 87 22 chr5 143621441 143622992 -59462540 - L1M1 LINE L1 -1417 6148 4700 2390 98 0 6 chr5 143622992 143623307 -59462225 - AluSp SINE Alu 0 313 1 9954 172 87 22 chr5 143623307 143624638 -59460894 - L1M1 LINE L1 -2865 4700 3050 941 249 10 0 chr5 143624693 143624902 -59460630 - AluJo SINE Alu -101 211 1 18724 149 30 3 chr5 143624902 143627874 -59457658 - L1M1 LINE L1 -4501 3064 12 2009 127 0 27 chr5 143628156 143628455 -59457077 - AluSx SINE Alu -19 293 3 269 287 93 27 chr5 143630590 143630740 -59454792 - MIR SINE MIR -62 200 41 306 191 160 0 chr5 143631310 143631404 -59454128 - L2 LINE L2 0 3313 3205 205 222 20 111 chr5 143631950 143632018 -59453514 + MIR SINE MIR 146 204 -58 2053 189 68 53 chr5 143632018 143632530 -59453002 - MLT2B1 LTR ERVL 0 520 1 205 222 20 111 chr5 143632530 143632560 -59452972 + MIR SINE MIR 204 235 -27 238 290 83 35 chr5 143632582 143632727 -59452805 - Charlie8 DNA MER1_type -2264 153 2 7044 182 36 50 chr5 143632758 143635638 -59449894 - L1MA4 LINE L1 -6 6294 3436 1690 135 7 0 chr5 143635638 143635919 -59449613 - L1MA2 LINE L1 -7 6297 6015 7044 182 36 50 chr5 143635919 143636130 -59449402 - L1MA4 LINE L1 -2864 3436 3224 301 265 8 150 chr5 143636139 143636392 -59449140 - L2 LINE L2 -61 3252 3036 2012 260 119 48 chr5 143636392 143637250 -59448282 - L2 LINE L2 -1015 2299 1381 2166 119 3 0 chr5 143637321 143637616 -59447916 - AluSq SINE Alu -17 296 1 285 257 9 19 chr5 143637863 143637968 -59447564 + (TAG)n Simple_repeat Simple_repeat 3 106 0 29 28 0 0 chr5 143638739 143638775 -59446757 + AT_rich Low_complexity Low_complexity 1 36 0 255 61 0 0 chr5 143638945 143638978 -59446554 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 383 279 37 42 chr5 143638982 143639172 -59446360 - L1ME1 LINE L1 -23 6143 5955 208 231 51 51 chr5 143640940 143641018 -59444514 - MER5A DNA MER1_type -7 182 105 245 285 173 19 chr5 143642127 143642282 -59443250 + MIR SINE MIR 16 194 -62 1307 225 144 26 chr5 143642436 143642853 -59442679 - MER31B LTR ERV1 0 466 1 2218 56 0 0 chr5 143643453 143643721 -59441811 + AluY SINE Alu 1 268 -43 24 32 0 0 chr5 143644266 143644297 -59441235 + AT_rich Low_complexity Low_complexity 1 31 0 37 62 0 0 chr5 143644342 143644407 -59441125 + AT_rich Low_complexity Low_complexity 1 65 0 185 366 0 12 chr5 143645292 143645374 -59440158 - MIR SINE MIR 0 262 182 2311 97 7 3 chr5 143646258 143646567 -59438965 - AluSg SINE Alu 0 310 1 204 287 102 37 chr5 143646890 143646998 -59438534 - MIR SINE MIR 0 262 148 208 336 89 20 chr5 143648875 143649021 -59436511 + L2 LINE L2 2514 2669 -645 409 184 20 0 chr5 143650644 143650742 -59434790 - L1PA15 LINE L1 0 6165 6066 1858 86 20 24 chr5 143650742 143651028 -59434504 - L1PA8 LINE L1 -7 6165 5875 252 200 91 0 chr5 143651895 143651950 -59433582 + L2 LINE L2 3210 3269 -3 653 247 44 43 chr5 143653160 143653410 -59432122 - L1ME3A LINE L1 -43 6127 5877 23 0 0 0 chr5 143654758 143654781 -59430751 + AT_rich Low_complexity Low_complexity 1 23 0 424 261 6 11 chr5 143655377 143655553 -59429979 + L1M4 LINE L1 2132 2306 -3840 258 314 122 27 chr5 143655579 143655767 -59429765 + MLT1J2 LTR MaLR 10 215 -235 309 164 27 27 chr5 143655840 143655950 -59429582 + (TA)n Simple_repeat Simple_repeat 2 111 0 216 0 0 0 chr5 143655965 143655989 -59429543 + (T)n Simple_repeat Simple_repeat 1 24 0 2052 118 3 0 chr5 143656288 143656594 -59428938 + L1PB1 LINE L1 5844 6150 -1 24 85 0 0 chr5 143656654 143656713 -59428819 + AT_rich Low_complexity Low_complexity 1 59 0 579 283 91 65 chr5 143656848 143658149 -59427383 + L1M4 LINE L1 2897 4231 -1915 351 333 53 35 chr5 143658655 143658826 -59426706 + L2 LINE L2 2685 2858 -456 331 217 19 0 chr5 143659144 143659250 -59426282 + CT-rich Low_complexity Low_complexity 1 108 0 1871 96 0 4 chr5 143659251 143659501 -59426031 - AluSg SINE Alu -33 277 29 1973 135 14 0 chr5 143659502 143659798 -59425734 - AluSx SINE Alu -12 300 1 6658 72 2 0 chr5 143660252 143661116 -59424416 - L1PA8 LINE L1 -4 6168 5303 1993 145 7 0 chr5 143661494 143661790 -59423742 + AluSx SINE Alu 1 298 -14 183 409 36 22 chr5 143662447 143662584 -59422948 - MIR3 SINE MIR -62 146 8 216 0 0 0 chr5 143663393 143663417 -59422115 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 1155 210 9 4 chr5 143666746 143666979 -59418553 - L1PA16 LINE L1 -25 6141 5908 491 56 127 0 chr5 143667952 143668023 -59417509 - MADE1 DNA Mariner 0 80 1 388 267 133 0 chr5 143668333 143668498 -59417034 + MIR SINE MIR 76 262 0 1393 272 179 8 chr5 143668608 143669100 -59416432 + MLT2E LTR ERVL 40 615 -13 3597 131 14 5 chr5 143669580 143670154 -59415378 - L1MA5A LINE L1 -29 6268 5690 3192 177 28 23 chr5 143670150 143670835 -59414697 - L1MA5A LINE L1 -1474 4672 3985 * 1714 333 57 35 chr5 143670866 143671595 -59413937 + ERVL LTR ERVL 851 1610 -4154 1576 182 44 36 chr5 143671595 143671957 -59413575 + MLT1A1 LTR MaLR 1 365 0 1714 333 57 35 chr5 143671957 143672236 -59413296 + ERVL LTR ERVL 1610 1881 -3883 2875 293 66 13 chr5 143672241 143674037 -59411495 + ERVL LTR ERVL 2891 4802 -962 1667 240 45 7 chr5 143674226 143674668 -59410864 - LTR40b LTR ERVL 0 462 4 24 32 0 0 chr5 143675658 143675689 -59409843 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr5 143678421 143678452 -59407080 + AT_rich Low_complexity Low_complexity 1 31 0 6141 180 33 3 chr5 143678687 143679013 -59406519 - L1PB4 LINE L1 0 6166 5851 465 19 0 0 chr5 143679013 143679067 -59406465 + (CA)n Simple_repeat Simple_repeat 2 55 0 6141 180 33 3 chr5 143679067 143680816 -59404716 - L1PB4 LINE L1 -315 5851 3995 2017 128 4 0 chr5 143681746 143682075 -59403457 + AluSx SINE Alu 1 330 0 288 304 83 48 chr5 143682184 143682352 -59403180 - MER5A DNA MER1_type -15 174 1 21 0 0 0 chr5 143683473 143683494 -59402038 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 143683524 143683545 -59401987 + AT_rich Low_complexity Low_complexity 1 21 0 624 134 50 25 chr5 143684418 143684537 -59400995 - MER41B LTR ERV1 0 635 514 318 27 0 0 chr5 143684537 143684574 -59400958 - L1P LINE L1 -1053 5093 5057 530 42 14 0 chr5 143684574 143684642 -59400890 + L1PA4 LINE L1 6083 6155 0 3519 111 4 9 chr5 143684644 143685168 -59400364 - MER41B LTR ERV1 -114 521 1 468 343 69 33 chr5 143685214 143685459 -59400073 - MIR SINE MIR -6 256 3 442 264 72 8 chr5 143685670 143685795 -59399737 + MER94 DNA DNA 1 133 -1 661 264 64 36 chr5 143685968 143686248 -59399284 - L2 LINE L2 0 3313 3026 214 261 0 0 chr5 143686447 143686493 -59399039 + CT-rich Low_complexity Low_complexity 2 47 0 663 126 0 18 chr5 143687131 143687242 -59398290 + MER4B LTR ERV1 1 109 -501 4045 163 11 19 chr5 143687248 143687838 -59397694 + MER50 LTR ERV1 1 585 -149 2274 198 41 70 chr5 143687838 143688466 -59397066 + LTR9 LTR ERV1 3 612 0 4045 163 11 19 chr5 143688466 143688592 -59396940 + MER50 LTR ERV1 585 711 -23 3536 161 57 13 chr5 143688596 143689320 -59396212 + MER4D LTR ERV1 120 903 0 6434 87 12 2 chr5 143690293 143691415 -59394117 + L1PA10 LINE L1 5038 6168 0 2007 117 34 0 chr5 143692543 143692834 -59392698 + AluSx SINE Alu 1 301 -11 204 125 0 0 chr5 143692834 143692866 -59392666 + (TA)n Simple_repeat Simple_repeat 1 32 0 1993 135 10 0 chr5 143692947 143693244 -59392288 - AluSx SINE Alu -12 300 1 235 75 0 25 chr5 143695645 143695685 -59389847 + L1MA1 LINE L1 6260 6298 -4 30 77 0 0 chr5 143695685 143695750 -59389782 + AT_rich Low_complexity Low_complexity 1 65 0 1771 168 7 3 chr5 143696506 143696815 -59388717 + AluJb SINE Alu 1 310 -2 893 311 83 33 chr5 143696966 143697484 -59388048 + L2 LINE L2 2035 2578 -736 208 300 43 0 chr5 143697493 143697563 -59387969 - MIR SINE MIR -4 258 186 355 329 78 23 chr5 143697937 143698156 -59387376 - L1MC4a LINE L1 -1898 5910 5680 2839 6 0 0 chr5 143698553 143698865 -59386667 - AluYb8 SINE Alu -6 312 1 1783 178 3 0 chr5 143699219 143699517 -59386015 - AluSx SINE Alu -13 299 1 400 243 9 9 chr5 143701121 143701232 -59384300 - MER103 DNA DNA -34 132 22 2135 104 3 10 chr5 143701303 143701600 -59383932 - AluSg SINE Alu -13 297 3 1252 89 16 11 chr5 143702357 143702547 -59382985 - L1P4 LINE L1 -631 5537 5347 3468 83 16 0 chr5 143702547 143703029 -59382503 + L1PA10 LINE L1 5677 6168 0 21 0 0 0 chr5 143703625 143703646 -59381886 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 143704386 143704408 -59381124 + (T)n Simple_repeat Simple_repeat 1 22 0 914 244 48 9 chr5 143705734 143705964 -59379568 + MER8 DNA MER2_type 1 239 0 2118 114 23 0 chr5 143706412 143706711 -59378821 - AluSp SINE Alu -7 306 1 354 66 33 0 chr5 143706972 143707033 -59378499 + L1PB2 LINE L1 6086 6148 -3 212 308 0 13 chr5 143708351 143708429 -59377103 - MIR SINE MIR 0 262 186 1780 191 3 0 chr5 143709254 143709548 -59375984 - AluSx SINE Alu -17 295 1 336 83 0 0 chr5 143710005 143710053 -59375479 + (TA)n Simple_repeat Simple_repeat 2 49 0 375 328 62 8 chr5 143710834 143710962 -59374570 + MIR SINE MIR 12 146 -116 2369 99 19 19 chr5 143711665 143712029 -59373503 - THE1B LTR MaLR 0 364 1 398 246 41 41 chr5 143712319 143712441 -59373091 - MIR SINE MIR -73 189 68 1976 144 3 7 chr5 143713556 143713861 -59371671 - AluSx SINE Alu -8 304 1 4129 172 45 27 chr5 143715615 143716505 -59369027 + MER4D LTR ERV1 1 664 0 1529 135 22 0 chr5 143716578 143716808 -59368724 - AluSp SINE Alu -21 292 58 45 19 0 0 chr5 143718363 143718415 -59367117 + AT_rich Low_complexity Low_complexity 1 52 0 919 200 71 0 chr5 143718415 143718640 -59366892 - L1MA4 LINE L1 -7 6293 6053 382 61 0 0 chr5 143718640 143718689 -59366843 - L1PA16 LINE L1 -11 6155 6107 487 289 89 0 chr5 143720262 143720397 -59365135 - MER91A DNA MER1_type -35 161 15 22 0 0 0 chr5 143721726 143721748 -59363784 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 143722081 143722103 -59363429 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr5 143722153 143722208 -59363324 + AT_rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr5 143722451 143722479 -59363053 + AT_rich Low_complexity Low_complexity 1 28 0 35 54 0 0 chr5 143723126 143723182 -59362350 + AT_rich Low_complexity Low_complexity 1 56 0 2149 121 6 6 chr5 143723276 143723589 -59361943 + AluSq SINE Alu 1 313 0 424 352 34 0 chr5 143725251 143725430 -59360102 + MIR3 SINE MIR 3 187 -21 374 260 72 61 chr5 143726360 143726541 -59358991 + L2 LINE L2 366 548 -2766 2230 278 125 71 chr5 143726577 143727949 -59357583 + L2 LINE L2 891 2336 -978 2356 90 0 0 chr5 143727983 143728294 -59357238 - AluY SINE Alu 0 311 1 583 254 144 45 chr5 143728320 143728457 -59357075 - MER46C DNA MER2_type -18 320 198 552 30 0 0 chr5 143728457 143728523 -59357009 + (TAATG)n Simple_repeat Simple_repeat 3 68 0 583 254 144 45 chr5 143728523 143728676 -59356856 - MER46C DNA MER2_type -140 198 1 250 248 40 30 chr5 143729454 143729555 -59355977 - MER113 DNA MER1_type? -298 223 122 220 216 20 0 chr5 143729681 143729732 -59355800 + L2 LINE L2 3172 3223 -49 418 336 62 14 chr5 143731387 143731595 -59353937 + MIR SINE MIR 45 262 0 438 281 163 7 chr5 143731696 143731849 -59353683 + MER5A DNA MER1_type 10 186 -3 2246 100 0 16 chr5 143732232 143732543 -59352989 - AluSg SINE Alu -4 306 1 21 36 0 0 chr5 143733987 143734015 -59351517 + AT_rich Low_complexity Low_complexity 1 28 0 432 309 60 12 chr5 143734167 143734419 -59351113 - L1ME LINE L1 -347 5774 5511 311 355 0 29 chr5 143734466 143734604 -59350928 - L2 LINE L2 -8 3305 3172 354 359 158 20 chr5 143734709 143734908 -59350624 - L2 LINE L2 -338 2976 2806 1700 165 4 0 chr5 143734908 143735180 -59350352 + AluSx SINE Alu 1 273 -39 354 359 158 20 chr5 143735180 143735526 -59350006 - L2 LINE L2 -508 2806 2356 2051 114 3 7 chr5 143735529 143735826 -59349706 - AluSx SINE Alu -16 296 1 531 308 36 45 chr5 143736321 143736629 -59348903 + L1MEc LINE L1 51 355 -6041 2242 254 94 60 chr5 143736658 143736959 -59348573 + L1MEc LINE L1 625 914 -5301 1887 136 23 23 chr5 143736959 143737267 -59348265 - AluSx SINE Alu -4 308 1 2242 254 94 60 chr5 143737267 143738775 -59346757 + L1MEc LINE L1 914 2508 -3707 2246 105 0 0 chr5 143738775 143739069 -59346463 - AluSq SINE Alu -19 294 1 2242 254 94 60 chr5 143739069 143740145 -59345387 + L1MEc LINE L1 2508 3546 -2669 186 103 0 0 chr5 143740175 143740204 -59345328 + (TG)n Simple_repeat Simple_repeat 2 30 0 573 312 80 53 chr5 143740249 143740670 -59344862 - L1MEd LINE L1 -5573 546 109 1616 194 18 37 chr5 143740670 143741051 -59344481 + MLT1A2 LTR MaLR 1 374 0 573 312 80 53 chr5 143741051 143741116 -59344416 - L1MEd LINE L1 -6010 109 47 255 287 56 28 chr5 143741672 143741780 -59343752 + L2 LINE L2 2434 2544 -770 607 299 34 5 chr5 143742425 143742629 -59342903 + MIR SINE MIR 2 211 -51 214 301 78 10 chr5 143742899 143743002 -59342530 - L2 LINE L2 -780 2534 2425 1786 235 108 23 chr5 143743062 143743765 -59341767 + L1 LINE L1 2764 3526 -2620 1378 220 63 28 chr5 143743773 143743910 -59341622 - L1 LINE L1 -1163 4983 4852 210 71 0 0 chr5 143743910 143743938 -59341594 + (TA)n Simple_repeat Simple_repeat 2 29 0 1378 220 63 28 chr5 143743938 143744164 -59341368 - L1 LINE L1 -1294 4852 4607 496 99 0 89 chr5 143744165 143744266 -59341266 + L1MB4 LINE L1 6089 6180 0 245 162 0 0 chr5 143744284 143744321 -59341211 + MLT1D LTR MaLR 27 63 -442 1929 173 31 25 chr5 143744326 143744684 -59340848 + MLT1A1 LTR MaLR 1 360 -5 1492 211 93 15 chr5 143744689 143745096 -59340436 + MLT1D LTR MaLR 67 505 0 2421 149 16 14 chr5 143745195 143745618 -59339914 - MSTA LTR MaLR -4 424 1 588 290 224 9 chr5 143745677 143746012 -59339520 - L2 LINE L2 -1107 2207 1801 327 185 8 17 chr5 143747020 143747139 -59338393 + (TA)n Simple_repeat Simple_repeat 1 118 0 2265 112 0 0 chr5 143749820 143750125 -59335407 + AluY SINE Alu 1 305 -6 307 360 63 40 chr5 143750833 143751055 -59334477 - MIR SINE MIR 0 262 36 292 351 77 83 chr5 143751689 143752159 -59333373 - L2 LINE L2 -2 3270 2804 1524 180 25 28 chr5 143753130 143753414 -59332118 + AluJb SINE Alu 5 287 -25 1630 177 0 3 chr5 143754624 143755011 -59330521 - AluJb SINE Alu 0 386 1 23 68 0 0 chr5 143756284 143756328 -59329204 + AT_rich Low_complexity Low_complexity 1 44 0 810 341 27 7 chr5 143757626 143757922 -59327610 + LTR16A LTR ERVL 110 411 -39 286 288 131 19 chr5 143758332 143758492 -59327040 - MIR3 SINE MIR -1 207 30 180 381 59 17 chr5 143760987 143761105 -59324427 - MIR3 SINE MIR -39 169 47 21 0 0 0 chr5 143761141 143761162 -59324370 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 33 chr5 143761176 143761237 -59324295 - L2 LINE L2 0 3313 3255 200 328 67 106 chr5 143761295 143761579 -59323953 - L2 LINE L2 -182 3090 2818 756 347 161 17 chr5 143761616 143762455 -59323077 - L2 LINE L2 -871 2443 1484 187 400 27 13 chr5 143762609 143762759 -59322773 - L2 LINE L2 -2200 1114 963 1626 170 45 21 chr5 143762829 143763117 -59322415 - AluJb SINE Alu -16 296 2 1681 210 26 24 chr5 143763154 143763657 -59321875 - L1MD2 LINE L1 -10 6349 5794 960 220 26 15 chr5 143763659 143763892 -59321640 - L1MD2 LINE L1 -582 5573 5402 23 0 0 0 chr5 143764962 143764985 -59320547 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr5 143765779 143765799 -59319733 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr5 143765972 143765996 -59319536 + AT_rich Low_complexity Low_complexity 1 24 0 347 290 8 38 chr5 143766274 143766405 -59319127 + MIR SINE MIR 87 213 -49 2773 3 0 0 chr5 143766826 143767128 -59318404 + AluYa5 SINE Alu 1 302 -9 26 30 0 0 chr5 143768372 143768405 -59317127 + AT_rich Low_complexity Low_complexity 1 33 0 1171 164 0 0 chr5 143769622 143769805 -59315727 - AluSg/x SINE Alu 0 310 128 210 91 0 0 chr5 143769826 143769859 -59315673 + (TG)n Simple_repeat Simple_repeat 2 34 0 204 163 0 0 chr5 143770092 143770135 -59315397 + (TG)n Simple_repeat Simple_repeat 2 44 0 1235 129 0 0 chr5 143772017 143772188 -59313344 + AluSg/x SINE Alu 129 299 -13 418 143 26 0 chr5 143772730 143772807 -59312725 + L1MA4 LINE L1 6101 6179 -121 357 24 0 0 chr5 143774410 143774452 -59311080 + (TG)n Simple_repeat Simple_repeat 1 42 0 447 273 97 17 chr5 143774548 143774786 -59310746 + L1M4 LINE L1 3256 3512 -2634 1971 132 0 30 chr5 143774880 143775141 -59310391 - L1PA14 LINE L1 -1 6160 5910 2068 126 0 10 chr5 143775141 143775450 -59310082 - AluSq SINE Alu -6 307 2 1971 132 0 30 chr5 143775450 143775521 -59310011 - L1PA14 LINE L1 -251 5910 5838 343 289 102 22 chr5 143775645 143775870 -59309662 + L1M4 LINE L1 3789 4031 -2115 237 314 47 25 chr5 143775950 143776176 -59309356 + L1M2 LINE L1 1861 2277 -4264 604 211 8 0 chr5 143776665 143776788 -59308744 + L1ME LINE L1 6 129 -5941 1938 168 0 0 chr5 143776817 143777121 -59308411 + AluSx SINE Alu 1 304 -8 5660 133 48 19 chr5 143777121 143778835 -59306697 - L1PA13 LINE L1 -16 6147 4384 624 273 24 38 chr5 143779159 143779368 -59306164 + L1ME LINE L1 393 598 -5472 892 201 6 0 chr5 143779368 143779532 -59306000 - MER58B DNA MER1_type 0 341 177 1458 290 68 19 chr5 143779617 143780570 -59304962 + L1ME LINE L1 660 1564 -4516 529 208 42 0 chr5 143780854 143780974 -59304558 + MER58B DNA MER1_type 202 326 -15 21 0 0 0 chr5 143781118 143781139 -59304393 + AT_rich Low_complexity Low_complexity 1 21 0 972 269 110 50 chr5 143781141 143781785 -59303747 + L1ME LINE L1 2049 2731 -3349 * 1773 241 83 32 chr5 143781782 143782682 -59302850 - L1ME LINE L1 -519 5643 4707 317 71 0 0 chr5 143782781 143782823 -59302709 + MADE1 DNA Mariner 1 42 -38 267 175 258 62 chr5 143783827 143783924 -59301608 - L2 LINE L2 0 3313 3198 1926 168 42 0 chr5 143784026 143784359 -59301173 - MER7A DNA MER2_type 0 346 2 5787 124 13 11 chr5 143784542 143785647 -59299885 - L1PA14 LINE L1 0 6161 5001 559 310 221 3 chr5 143785647 143785973 -59299559 + L2 LINE L2 1965 2361 -953 * 1043 284 74 27 chr5 143785972 143786338 -59299194 + L2 LINE L2 2929 3311 -2 260 331 73 45 chr5 143786796 143786974 -59298558 + MIR SINE MIR 6 188 -74 402 20 0 0 chr5 143786974 143787024 -59298508 - L1PA6 LINE L1 -1114 5032 4983 6923 60 1 9 chr5 143787024 143788178 -59297354 + L1PA6 LINE L1 5008 6154 0 201 175 35 70 chr5 143788673 143788730 -59296802 - L2 LINE L2 -459 2855 2801 2408 67 0 22 chr5 143788860 143789173 -59296359 - AluY SINE Alu -3 308 3 336 224 201 52 chr5 143789244 143789378 -59296154 - L2 LINE L2 -2 3311 3158 950 174 23 64 chr5 143790146 143790365 -59295167 - MER2 DNA MER2_type -135 210 1 302 282 103 8 chr5 143791031 143791148 -59294384 - MIR SINE MIR -44 218 91 287 380 9 9 chr5 143792075 143792183 -59293349 - MIR3 SINE MIR -96 112 5 24 0 0 0 chr5 143792405 143792429 -59293103 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 143792592 143792616 -59292916 + AT_rich Low_complexity Low_complexity 1 24 0 342 296 169 14 chr5 143793649 143793791 -59291741 - MIR SINE MIR -86 176 13 254 247 171 51 chr5 143794887 143795045 -59290487 + MIR SINE MIR 57 233 -29 380 248 43 35 chr5 143795878 143796019 -59289513 - MIR SINE MIR -3 259 118 359 323 20 66 chr5 143797439 143797637 -59287895 + MER5A DNA MER1_type 1 189 0 22760 42 3 0 chr5 143797764 143800620 -59284912 - L1P LINE L1 -1443 4703 1840 3244 43 2 2 chr5 143800617 143801051 -59284481 + L1PA4 LINE L1 5734 6167 0 * 1603 55 0 0 chr5 143801062 143801264 -59284268 - L1P LINE L1 -4302 1844 1643 7344 44 2 0 chr5 143801264 143802719 -59282813 + L1PA5 LINE L1 4695 6150 -4 31 0 0 0 chr5 143802885 143802916 -59282616 + AT_rich Low_complexity Low_complexity 1 31 0 285 318 92 28 chr5 143803603 143803829 -59281703 - MIR SINE MIR -15 247 7 776 163 0 0 chr5 143804133 143804262 -59281270 - AluSx SINE Alu -1 311 183 546 170 0 0 chr5 143804268 143804362 -59281170 - AluSx SINE Alu -211 101 8 1670 159 20 20 chr5 143804567 143804868 -59280664 - L1MA9 LINE L1 -218 6094 5794 378 0 0 0 chr5 143804868 143804910 -59280622 + (TA)n Simple_repeat Simple_repeat 1 42 0 297 0 0 0 chr5 143804909 143804942 -59280590 + (CA)n Simple_repeat Simple_repeat 2 34 0 * 215 219 41 0 chr5 143804975 143805048 -59280484 + (TA)n Simple_repeat Simple_repeat 1 76 0 238 279 51 0 chr5 143805050 143805129 -59280403 - L1MC4 LINE L1 -1335 6707 6625 * 270 160 40 0 chr5 143805121 143805171 -59280361 - L1MA9 LINE L1 -527 5773 5722 2079 109 3 0 chr5 143805812 143806122 -59279410 + AluSx SINE Alu 1 311 0 1558 320 104 14 chr5 143807335 143808151 -59277381 - L2 LINE L2 -60 3253 2372 346 374 78 64 chr5 143808451 143808773 -59276759 - L2 LINE L2 -36 3236 2905 1315 70 75 5 chr5 143808773 143808973 -59276559 - L1PA10 LINE L1 -16 6152 5939 346 374 78 64 chr5 143808973 143809073 -59276459 - L2 LINE L2 -367 2905 2808 293 289 39 31 chr5 143809138 143809241 -59276291 + MIR SINE MIR 8 113 -95 208 333 0 37 chr5 143809829 143809910 -59275622 + MER5C DNA MER1_type 1 78 -246 279 0 0 0 chr5 143810166 143810197 -59275335 + (CA)n Simple_repeat Simple_repeat 2 32 0 306 283 53 26 chr5 143810434 143810547 -59274985 + MIR SINE MIR 110 225 -37 2128 78 34 7 chr5 143810639 143810932 -59274600 + AluSp SINE Alu 1 301 -12 2586 204 54 24 chr5 143810943 143811521 -59274011 + MER77 LTR ERV1 3 597 -8 2041 84 0 14 chr5 143811852 143812156 -59273376 + AluSg SINE Alu 1 300 0 202 211 0 0 chr5 143812775 143812813 -59272719 + (TG)n Simple_repeat Simple_repeat 1 38 0 25 0 0 0 chr5 143813677 143813702 -59271830 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr5 143813904 143813940 -59271592 + AT_rich Low_complexity Low_complexity 1 36 0 1154 242 0 4 chr5 143814002 143814242 -59271290 - MER8 DNA MER2_type 0 239 1 758 106 49 0 chr5 143814282 143814405 -59271127 + L1MA8 LINE L1 6110 6238 -53 314 273 10 0 chr5 143814450 143814549 -59270983 + L1ME3A LINE L1 6033 6132 -38 577 254 110 59 chr5 143814654 143814926 -59270606 - MER102b DNA MER1_type -12 329 44 2386 92 10 0 chr5 143815086 143815390 -59270142 - AluSc SINE Alu 0 309 3 395 312 139 34 chr5 143815517 143815754 -59269778 + MIR SINE MIR 1 262 0 374 287 41 0 chr5 143815774 143815896 -59269636 + MIR SINE MIR 132 258 -4 229 344 33 22 chr5 143817325 143817415 -59268117 - MIR SINE MIR -118 144 54 38 0 0 0 chr5 143817548 143817586 -59267946 + AT_rich Low_complexity Low_complexity 1 38 0 228 233 0 0 chr5 143818057 143818100 -59267432 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 203 245 20 0 chr5 143818407 143818456 -59267076 + GA-rich Low_complexity Low_complexity 3 52 0 313 302 42 21 chr5 143818824 143819013 -59266519 - L1M4 LINE L1 -1979 4167 3975 21 57 0 0 chr5 143820043 143820078 -59265454 + AT_rich Low_complexity Low_complexity 1 35 0 2203 109 7 7 chr5 143820617 143820921 -59264611 - AluSx SINE Alu -8 304 1 2312 114 0 0 chr5 143821424 143821722 -59263810 + AluSx SINE Alu 1 298 -14 28 29 0 0 chr5 143822395 143822430 -59263102 + AT_rich Low_complexity Low_complexity 1 35 0 382 277 82 22 chr5 143822618 143822802 -59262730 + L1MEd LINE L1 22 216 -5903 215 304 29 7 chr5 143823516 143823654 -59261878 + (TA)n Simple_repeat Simple_repeat 1 141 0 526 304 128 52 chr5 143824200 143824934 -59260598 + L1MEd LINE L1 2190 2979 -3150 180 0 0 0 chr5 143825181 143825201 -59260331 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4897 142 38 5 chr5 143826178 143827011 -59258521 + L1MC1 LINE L1 5466 6326 -7 316 291 54 37 chr5 143827037 143827333 -59258199 + L1MEc LINE L1 1371 1671 -4725 7769 100 6 3 chr5 143827660 143828749 -59256783 + L1P3 LINE L1 1 1092 -5369 7043 144 18 8 chr5 143829355 143831086 -59254446 + L1MA7 LINE L1 4091 5843 -448 207 0 0 0 chr5 143831193 143831216 -59254316 + (CA)n Simple_repeat Simple_repeat 1 23 0 225 224 40 0 chr5 143831268 143831344 -59254188 + LTR66 LTR ERVL 386 464 -146 13467 211 23 25 chr5 143831344 143832531 -59253001 - L1P5 LINE L1 -395 6071 4883 2353 107 0 0 chr5 143832531 143832841 -59252691 - AluY SINE Alu -1 310 1 13467 211 23 25 chr5 143832841 143833041 -59252491 - L1P5 LINE L1 -1583 4883 4684 270 0 0 0 chr5 143833041 143833071 -59252461 + (TTG)n Simple_repeat Simple_repeat 2 31 0 13467 211 23 25 chr5 143833071 143835762 -59249770 - L1P5 LINE L1 -1782 4684 1984 11175 92 5 2 chr5 143835770 143838160 -59247372 - L1PA7 LINE L1 -2 6152 3781 4744 54 35 9 chr5 143838160 143839165 -59246367 - MER11A LTR ERVK 0 1266 1 19455 128 12 94 chr5 143839165 143843274 -59242258 - L1PA7 LINE L1 -2360 3786 13 10566 113 28 9 chr5 143843270 143844855 -59240677 - L1P5 LINE L1 -4842 1619 5 * 6607 99 22 1 chr5 143844858 143845903 -59239629 - L1PBa LINE L1 -4543 2320 1110 1221 141 15 0 chr5 143845902 143846101 -59239431 - L1PBa LINE L1 -6661 202 1 * 1265 246 28 8 chr5 143846114 143846504 -59239028 + L1M4 LINE L1 2203 2600 -3546 1883 258 108 24 chr5 143846507 143847081 -59238451 + MLT2F LTR ERVL 1 622 -41 1394 288 88 78 chr5 143847204 143848459 -59237073 + ERVL LTR ERVL 1 1309 -4400 2155 128 7 0 chr5 143849688 143849994 -59235538 + AluSx SINE Alu 3 310 -2 24 0 0 0 chr5 143849995 143850019 -59235513 + AT_rich Low_complexity Low_complexity 1 24 0 597 312 0 0 chr5 143850993 143851147 -59234385 + MIR3 SINE MIR 54 207 -1 313 310 30 65 chr5 143851708 143851908 -59233624 + MIR SINE MIR 12 204 -58 369 123 35 0 chr5 143853716 143853773 -59231759 - MER21A LTR ERV1 0 931 873 2926 165 21 23 chr5 143853774 143854296 -59231236 - MER21A LTR ERV1 -26 905 385 1534 198 39 164 chr5 143854373 143855162 -59230370 - LTR8A LTR ERV1 -3 724 34 24 0 0 0 chr5 143855185 143855209 -59230323 + AT_rich Low_complexity Low_complexity 1 24 0 351 96 0 0 chr5 143856012 143856064 -59229468 + (CA)n Simple_repeat Simple_repeat 2 53 0 16512 26 5 0 chr5 143856290 143859011 -59226521 + L1PA4 LINE L1 3415 6144 -11 1439 189 39 20 chr5 143860587 143860893 -59224639 - AluJb SINE Alu 0 312 1 222 245 19 0 chr5 143861059 143861112 -59224420 + (CATA)n Simple_repeat Simple_repeat 3 56 0 330 306 88 48 chr5 143861764 143861911 -59223621 - MER91A DNA MER1_type -27 169 17 1254 235 143 9 chr5 143862653 143863109 -59222423 + Charlie1b DNA MER1_type 1 517 -6 11258 198 17 9 chr5 143863131 143865926 -59219606 + L1PA16 LINE L1 2593 5421 -745 2135 121 3 3 chr5 143865926 143866223 -59219309 + AluSx SINE Alu 1 297 -15 11258 198 17 9 chr5 143866223 143866971 -59218561 + L1PA16 LINE L1 5421 6162 -4 587 325 108 45 chr5 143867002 143867623 -59217909 - L2 LINE L2 -952 2362 1703 470 294 188 37 chr5 143868764 143869247 -59216285 + LTR67 LTR ERVL 2 557 0 222 282 195 20 chr5 143869410 143869559 -59215973 + MIR SINE MIR 40 214 -48 265 277 36 24 chr5 143869657 143869740 -59215792 - LTR67 LTR ERVL -35 522 439 1008 275 98 61 chr5 143870000 143870085 -59215447 - L1ME3A LINE L1 -292 5878 5798 1611 192 37 101 chr5 143870085 143870622 -59214910 + MLT1D LTR MaLR 1 503 -2 963 194 28 32 chr5 143870625 143870841 -59214691 - MER20 DNA MER1_type -1 218 4 1008 275 98 61 chr5 143870841 143871354 -59214178 - L1ME3A LINE L1 -373 5797 5254 2313 111 3 8 chr5 143871624 143871977 -59213555 - L1PB1 LINE L1 0 6151 5801 1894 143 31 7 chr5 143872554 143872847 -59212685 - AluSx SINE Alu -12 300 1 248 336 18 27 chr5 143873478 143873588 -59211944 - LTR67 LTR ERVL -335 222 114 192 294 0 0 chr5 143873702 143873753 -59211779 + L2 LINE L2 2595 2645 -669 268 343 124 0 chr5 143873913 143874018 -59211514 + L2 LINE L2 2941 3058 -214 285 201 22 179 chr5 143875027 143875211 -59210321 + MER103 DNA DNA 12 166 0 27 49 0 0 chr5 143875411 143875452 -59210080 + AT_rich Low_complexity Low_complexity 1 41 0 29 0 0 0 chr5 143875533 143875562 -59209970 + AT_rich Low_complexity Low_complexity 1 29 0 184 333 0 0 chr5 143875573 143875642 -59209890 - L3b LINE CR1 -153 1430 1362 2079 112 51 51 chr5 143875739 143876114 -59209418 - THE1C LTR MaLR 0 375 1 2865 193 74 8 chr5 143876189 143876828 -59208704 - L1MB7 LINE L1 -16 6168 5488 820 156 16 27 chr5 143876837 143877023 -59208509 + L1M4 LINE L1 5268 5451 -727 610 323 51 0 chr5 143879539 143879734 -59205798 - MIR SINE MIR -1 261 57 204 333 28 0 chr5 143880375 143880447 -59205085 - MIR SINE MIR -32 230 157 23 33 0 0 chr5 143882198 143882228 -59203304 + AT_rich Low_complexity Low_complexity 1 30 0 338 368 132 32 chr5 143883341 143883783 -59201749 - L2 LINE L2 0 3272 2772 411 288 107 63 chr5 143883815 143884228 -59201304 - L2 LINE L2 -729 2585 2155 190 342 71 19 chr5 143886532 143886687 -59198845 - MIR SINE MIR -99 163 1 2946 273 112 30 chr5 143888176 143889456 -59196076 + L2 LINE L2 38 1507 -1807 262 226 148 26 chr5 143889498 143889613 -59195919 + L1MC4 LINE L1 7914 8042 0 226 304 14 0 chr5 143889624 143889693 -59195839 + L2 LINE L2 2782 2851 -463 730 291 36 5 chr5 143889699 143889919 -59195613 + LTR33 LTR ERVL 19 245 -276 331 244 81 0 chr5 143890004 143890127 -59195405 + LTR33 LTR ERVL 384 516 -5 887 302 152 10 chr5 143890139 143890553 -59194979 + L2 LINE L2 2841 3313 0 242 318 41 77 chr5 143890670 143890840 -59194692 - MIR3 SINE MIR -24 184 21 403 286 103 18 chr5 143891537 143891680 -59193852 - MIR SINE MIR -29 179 28 355 275 147 24 chr5 143891803 143892014 -59193518 - L3 LINE CR1 -3 1574 1338 321 322 164 34 chr5 143892377 143892883 -59192649 - L2 LINE L2 -112 3201 2571 429 281 124 19 chr5 143893321 143893531 -59192001 + MIR SINE MIR 2 233 -29 245 177 16 32 chr5 143894886 143894948 -59190584 + (TCTCTG)n Simple_repeat Simple_repeat 6 66 0 576 200 0 0 chr5 143894949 143895124 -59190408 + CT-rich Low_complexity Low_complexity 2 176 0 1350 159 0 22 chr5 143895477 143895703 -59189829 + AluJb SINE Alu 85 305 -7 353 223 43 11 chr5 143896206 143896300 -59189232 - MIR SINE MIR 0 262 166 1662 247 50 52 chr5 143896300 143896785 -59188747 + LTR16C LTR ERVL 8 491 0 711 332 58 50 chr5 143897120 143897684 -59187848 + HERV16 LTR ERVL 362 930 -4066 1153 337 85 20 chr5 143897881 143898827 -59186705 + HERV16 LTR ERVL 1215 2290 -2706 602 336 80 14 chr5 143898921 143899207 -59186325 + HERV16 LTR ERVL 3066 3370 -2394 351 391 26 0 chr5 143899460 143899693 -59185839 + HERV16 LTR ERVL 3667 3905 -1749 650 357 61 15 chr5 143899890 143900993 -59184539 + HERV16 LTR ERVL 4131 5384 -380 423 263 9 20 chr5 143901133 143901253 -59184279 - MIR SINE MIR -62 146 38 2271 102 3 13 chr5 143901289 143901602 -59183930 + AluSg SINE Alu 1 310 0 1664 156 13 43 chr5 143901626 143901928 -59183604 + AluJo SINE Alu 1 293 -19 38 39 0 0 chr5 143903180 143903232 -59182300 + AT_rich Low_complexity Low_complexity 1 52 0 313 273 50 33 chr5 143903554 143903675 -59181857 - L1 LINE L1 -3752 2394 2272 1804 149 21 12 chr5 143904372 143904707 -59180825 + L1MA4A LINE L1 5955 6292 -11 180 0 0 0 chr5 143905155 143905175 -59180357 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 320 191 11 0 chr5 143905179 143905268 -59180264 + GA-rich Low_complexity Low_complexity 1 90 0 662 244 24 5 chr5 143905305 143905518 -59180014 + L1M4 LINE L1 4942 5158 -988 815 165 12 6 chr5 143905550 143905714 -59179818 + L1MA10 LINE L1 6170 6334 0 17919 182 11 12 chr5 143906048 143907690 -59177842 + L1PA14 LINE L1 1531 3173 -2988 2002 137 10 3 chr5 143907690 143908018 -59177514 + AluSx SINE Alu 1 330 0 17919 182 11 12 chr5 143908018 143908353 -59177179 + L1PA14 LINE L1 3173 3507 -2654 612 40 0 0 chr5 143908353 143908428 -59177104 + (GAAA)n Simple_repeat Simple_repeat 1 75 0 17919 182 11 12 chr5 143908428 143911080 -59174452 + L1PA14 LINE L1 3507 6159 -2 499 163 22 22 chr5 143913857 143913949 -59171583 + AluJ/FLAM SINE Alu 1 92 -220 1615 190 102 36 chr5 143914235 143914678 -59170854 + MER70A LTR ERVL 1 472 0 252 289 24 0 chr5 143915208 143915291 -59170241 - ERVL LTR ERVL -4725 1039 955 1756 198 161 0 chr5 143915311 143915746 -59169786 - MLT1D LTR MaLR 0 505 1 318 182 61 61 chr5 143915985 143916084 -59169448 + MIR SINE MIR 66 164 -98 952 259 120 52 chr5 143916281 143916831 -59168701 - LTR50 LTR ERVL -125 670 3 26 30 0 0 chr5 143918696 143918729 -59166803 + AT_rich Low_complexity Low_complexity 1 33 0 34 24 0 0 chr5 143918897 143918938 -59166594 + AT_rich Low_complexity Low_complexity 1 41 0 26 74 0 0 chr5 143919106 143919160 -59166372 + AT_rich Low_complexity Low_complexity 1 54 0 193 289 77 0 chr5 143919894 143919946 -59165586 - MIR SINE MIR -194 68 13 367 317 56 24 chr5 143919969 143920287 -59165245 - MLT1K LTR MaLR -7 581 220 23 0 0 0 chr5 143920407 143920430 -59165102 + AT_rich Low_complexity Low_complexity 1 23 0 210 241 169 0 chr5 143920520 143920603 -59164929 - MIR SINE MIR -82 180 84 903 246 149 37 chr5 143922448 143922820 -59162712 + L2 LINE L2 2700 3160 -153 2014 93 4 7 chr5 143922820 143923119 -59162413 - AluSc SINE Alu 0 308 11 903 246 149 37 chr5 143923119 143923292 -59162240 + L2 LINE L2 3160 3312 -1 2375 67 0 3 chr5 143923365 143923664 -59161868 + AluY SINE Alu 1 298 -13 239 268 12 24 chr5 143923723 143923805 -59161727 - MIR SINE MIR -10 252 172 2538 55 3 0 chr5 143924393 143924703 -59160829 + AluY SINE Alu 1 311 0 551 194 10 0 chr5 143925242 143925345 -59160187 - MER58 DNA MER1_type 0 2420 2317 545 245 0 0 chr5 143925373 143925471 -59160061 - MER58 DNA MER1_type -2321 99 2 204 262 71 79 chr5 143925473 143925599 -59159933 - MIR3 SINE MIR -49 159 35 414 0 0 0 chr5 143925884 143925930 -59159602 + (TA)n Simple_repeat Simple_repeat 2 47 0 1637 230 112 44 chr5 143926248 143927088 -59158444 + L1MC5 LINE L1 7017 7913 -48 1174 274 58 44 chr5 143927400 143927879 -59157653 + LTR16C LTR ERVL 4 489 -2 289 235 0 148 chr5 143928099 143928214 -59157318 - MER5A DNA MER1_type 0 189 92 14774 100 8 1 chr5 143929254 143931407 -59154125 - L1PA7 LINE L1 -1451 4695 2528 6748 63 9 3 chr5 143931407 143932840 -59152692 + L1PA7 LINE L1 4728 6153 -1 2244 103 3 0 chr5 143932937 143933237 -59152295 - AluSx SINE Alu -11 301 1 270 172 86 26 chr5 143933374 143933490 -59152042 - Charlie1 DNA MER1_type -103 2658 2536 20320 30 4 0 chr5 143933504 143936725 -59148807 - L1PA3 LINE L1 -3 6152 2922 185 282 0 10 chr5 143937158 143937261 -59148271 + (TA)n Simple_repeat Simple_repeat 2 103 0 21 0 0 0 chr5 143937376 143937397 -59148135 + AT_rich Low_complexity Low_complexity 1 21 0 1729 159 14 17 chr5 143937417 143937762 -59147770 - L1MA5 LINE L1 -1 6299 5956 538 181 30 38 chr5 143937767 143937900 -59147632 + Charlie5 DNA MER1_type 2452 2583 -29 21 36 0 0 chr5 143938055 143938083 -59147449 + AT_rich Low_complexity Low_complexity 1 28 0 606 168 52 100 chr5 143938491 143938741 -59146791 - L1MC5 LINE L1 -105 7856 7619 634 293 122 49 chr5 143940231 143940425 -59145107 + L2 LINE L2 2610 2788 -525 960 146 200 46 chr5 143940425 143940705 -59144827 + MER33 DNA MER1_type 2 324 0 634 293 122 49 chr5 143940705 143941040 -59144492 + L2 LINE L2 2788 3202 -111 330 26 0 0 chr5 143941040 143941079 -59144453 + (TG)n Simple_repeat Simple_repeat 2 40 0 634 293 122 49 chr5 143941079 143941199 -59144333 + L2 LINE L2 3202 3312 -1 238 301 235 0 chr5 143941279 143941415 -59144117 - MIR SINE MIR -10 252 85 383 289 122 24 chr5 143941471 143941717 -59143815 + L2 LINE L2 3044 3313 0 842 183 56 5 chr5 143941927 143942124 -59143408 - MER3 DNA MER1_type -1 208 2 494 317 163 47 chr5 143943254 143943891 -59141641 - L1M2 LINE L1 -5723 1126 416 255 125 0 0 chr5 143943918 143943958 -59141574 + (CCG)n Simple_repeat Simple_repeat 1 40 0 342 289 156 97 chr5 143944087 143944852 -59140680 + L1M2 LINE L1 174 983 -5866 21 0 0 0 chr5 143947098 143947119 -59138413 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 143948114 143948138 -59137394 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr5 143948568 143948605 -59136927 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr5 143949447 143949479 -59136053 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 143950528 143950556 -59134976 + AT_rich Low_complexity Low_complexity 1 28 0 549 335 34 0 chr5 143950724 143950930 -59134602 + MIR SINE MIR 50 262 0 2390 55 10 0 chr5 143951151 143951444 -59134088 + AluY SINE Alu 1 296 -15 186 43 0 0 chr5 143952519 143952542 -59132990 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2203 102 3 10 chr5 143953495 143953789 -59131743 - AluSp SINE Alu -21 292 1 25 0 0 0 chr5 143955836 143955861 -59129671 + AT_rich Low_complexity Low_complexity 1 25 0 542 228 0 18 chr5 143956493 143956607 -59128925 + MIR SINE MIR 32 143 -119 488 206 22 0 chr5 143956607 143956699 -59128833 + MER2 DNA MER2_type 3 96 -249 374 276 26 26 chr5 143956756 143956872 -59128660 + MIR SINE MIR 147 262 0 437 295 0 0 chr5 143956889 143957001 -59128531 + MIR SINE MIR 151 262 0 419 333 47 12 chr5 143957135 143957306 -59128226 + MER5B DNA MER1_type 2 178 0 22 0 0 0 chr5 143958181 143958203 -59127329 + AT_rich Low_complexity Low_complexity 1 22 0 2892 10 0 0 chr5 143958203 143958517 -59127015 + AluYb8 SINE Alu 1 314 -4 450 278 92 0 chr5 143958533 143958706 -59126826 - LTR37A LTR ERV1 -12 414 226 2234 111 39 33 chr5 143958774 143959136 -59126396 - THE1B LTR MaLR 0 364 1 1916 197 19 35 chr5 143959184 143959578 -59125954 - L1MA7 LINE L1 0 6291 5892 3414 180 15 86 chr5 143959578 143959611 -59125921 - MER44D DNA MER2_type -1882 605 571 2050 154 0 6 chr5 143959611 143959923 -59125609 - AluSg SINE Alu 0 310 1 3414 180 15 86 chr5 143959923 143960194 -59125338 - MER44D DNA MER2_type -1916 571 517 1732 194 0 3 chr5 143960194 143960493 -59125039 - AluJb SINE Alu -8 304 7 3414 180 15 86 chr5 143960493 143960976 -59124556 - MER44D DNA MER2_type -1970 517 1 1916 197 19 35 chr5 143960976 143961068 -59124464 - L1MA7 LINE L1 -399 5892 5813 5333 176 17 6 chr5 143961079 143962203 -59123329 - L1MA4 LINE L1 0 6300 5166 281 303 11 11 chr5 143962232 143962321 -59123211 - MER5B DNA MER1_type -86 92 4 525 276 291 36 chr5 143962783 143963219 -59122313 - L2 LINE L2 0 3313 2778 27 0 0 0 chr5 143963354 143963381 -59122151 + AT_rich Low_complexity Low_complexity 1 27 0 22 99 0 0 chr5 143963396 143963467 -59122065 + AT_rich Low_complexity Low_complexity 1 71 0 2263 105 0 0 chr5 143963746 143964041 -59121491 + AluSc SINE Alu 1 295 -14 301 304 257 25 chr5 143964309 143964789 -59120743 - L2 LINE L2 0 3313 2707 2019 138 17 0 chr5 143964815 143965163 -59120369 - L1MA8 LINE L1 0 6291 5938 198 224 0 0 chr5 143965256 143965305 -59120227 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 22 0 0 0 chr5 143966279 143966301 -59119231 + AT_rich Low_complexity Low_complexity 1 22 0 1151 126 11 0 chr5 143967427 143967601 -59117931 - L1PA12 LINE L1 -15 6153 5978 2779 208 29 45 chr5 143969501 143970059 -59115473 + L1 LINE L1 3362 3905 -2241 2249 86 7 13 chr5 143970059 143970360 -59115172 + AluSx SINE Alu 1 299 -13 2779 208 29 45 chr5 143970360 143970571 -59114961 + L1 LINE L1 3905 4118 -2028 1487 226 15 12 chr5 143971908 143972235 -59113297 - MLT2D LTR ERVL -86 328 1 210 349 15 0 chr5 143972598 143972664 -59112868 + MIR SINE MIR 28 94 -114 24 91 0 0 chr5 143973135 143973201 -59112331 + AT_rich Low_complexity Low_complexity 1 66 0 406 258 189 25 chr5 143973688 143973932 -59111600 + L1ME4a LINE L1 5612 5895 -226 21 0 0 0 chr5 143975199 143975220 -59110312 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr5 143975386 143975418 -59110114 + AT_rich Low_complexity Low_complexity 1 32 0 362 339 76 0 chr5 143975547 143975665 -59109867 - MIR SINE MIR -79 183 57 257 51 26 0 chr5 143976612 143976651 -59108881 + (TG)n Simple_repeat Simple_repeat 2 41 0 326 346 42 27 chr5 143977140 143977403 -59108129 + MLT2D LTR ERVL 91 357 -57 351 65 0 0 chr5 143977436 143977482 -59108050 + (TA)n Simple_repeat Simple_repeat 2 47 0 227 191 0 0 chr5 143977568 143977610 -59107922 + MLT2D LTR ERVL 368 409 -5 22 0 0 0 chr5 143978242 143978264 -59107268 + AT_rich Low_complexity Low_complexity 1 22 0 1878 145 3 26 chr5 143979238 143979541 -59105991 - AluSx SINE Alu -13 299 4 419 297 21 28 chr5 143980568 143980713 -59104819 + MIR SINE MIR 2 145 -117 4813 105 12 7 chr5 143981007 143981750 -59103782 - L1P LINE L1 -1135 5011 4265 1949 129 0 3 chr5 143981761 143982048 -59103484 - AluSc SINE Alu -23 286 1 230 303 34 0 chr5 143982146 143982235 -59103297 - HAL1 LINE L1 -587 1920 1829 291 215 0 0 chr5 143982316 143982381 -59103151 + CT-rich Low_complexity Low_complexity 3 67 0 21 36 0 0 chr5 143982402 143982430 -59103102 + AT_rich Low_complexity Low_complexity 1 28 0 4421 104 47 39 chr5 143982438 143983186 -59102346 - L1PA13 LINE L1 -4 6159 5406 2119 38 0 4 chr5 143985037 143985298 -59100234 + L1PA4 LINE L1 5885 6144 -11 265 345 86 14 chr5 143986933 143987072 -59098460 - MIR SINE MIR -94 168 20 184 0 30 61 chr5 143987085 143987118 -59098414 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 25 0 0 0 chr5 143987710 143987735 -59097797 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr5 143987966 143987986 -59097546 + (TA)n Simple_repeat Simple_repeat 2 21 0 283 310 96 54 chr5 143988057 143988296 -59097236 - MIR SINE MIR -12 250 2 22 0 0 0 chr5 143990151 143990173 -59095359 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 143990294 143990322 -59095210 + AT_rich Low_complexity Low_complexity 1 28 0 2257 68 0 7 chr5 143990370 143990663 -59094869 + AluY SINE Alu 1 291 -20 5021 194 33 35 chr5 143990918 143992376 -59093156 - L1MC1 LINE L1 -18 6315 4862 2330 45 0 48 chr5 143992376 143992686 -59092846 + AluY SINE Alu 1 295 -16 5021 194 33 35 chr5 143992686 143992812 -59092720 - L1MC1 LINE L1 -1471 4862 4737 487 231 46 0 chr5 143992823 143992953 -59092579 - L1MC1 LINE L1 -1842 4304 4169 950 180 5 30 chr5 143992953 143993153 -59092379 - AluJo SINE Alu 0 312 118 1504 254 28 12 chr5 143993153 143993579 -59091953 - L1MC1 LINE L1 -1990 4156 3724 375 319 44 7 chr5 143994282 143994417 -59091115 + MIR SINE MIR 123 262 0 187 227 0 23 chr5 143995041 143995085 -59090447 - L2 LINE L2 -4 3309 3267 6367 182 13 7 chr5 143995479 143997653 -59087879 - L1PA15 LINE L1 -1 6164 3977 380 271 33 33 chr5 143999033 143999184 -59086348 - LTR67 LTR ERVL -7 550 400 238 311 113 33 chr5 143999284 143999435 -59086097 - LTR67 LTR ERVL -285 272 110 196 356 132 24 chr5 143999572 143999861 -59085671 + L2 LINE L2 2845 3164 -108 1849 152 152 8 chr5 143999876 144000250 -59085282 - MSTA LTR MaLR 0 428 1 7579 181 114 1 chr5 144000250 144001734 -59083798 - MSTA-int LTR MaLR 0 1651 1 1817 143 127 16 chr5 144001734 144002119 -59083413 - MSTA LTR MaLR 0 428 1 198 71 0 0 chr5 144003442 144003470 -59082062 + (TG)n Simple_repeat Simple_repeat 1 28 0 248 273 0 23 chr5 144003473 144003561 -59081971 + (TA)n Simple_repeat Simple_repeat 2 87 0 1150 96 0 0 chr5 144003561 144003718 -59081814 + Tigger5 DNA MER2_type 2072 2228 -95 1184 187 105 45 chr5 144003718 144003985 -59081547 + AluJo SINE Alu 6 288 -24 497 198 0 0 chr5 144003997 144004078 -59081454 + Tigger5 DNA MER2_type 2241 2321 -2 2143 175 89 4 chr5 144004403 144004830 -59080702 - MER21A LTR ERV1 -6 925 377 1160 186 95 8 chr5 144004824 144005076 -59080456 - MER21A LTR ERV1 -656 275 2 * 278 281 89 30 chr5 144005329 144005464 -59080068 - MIR SINE MIR -32 230 88 1573 98 0 0 chr5 144007206 144007409 -59078123 - AluSg SINE Alu -107 203 1 24 53 0 0 chr5 144007447 144007485 -59078047 + AT_rich Low_complexity Low_complexity 1 38 0 28 29 0 0 chr5 144008228 144008263 -59077269 + AT_rich Low_complexity Low_complexity 1 35 0 4179 163 56 9 chr5 144009296 144009773 -59075759 - L1MA9 LINE L1 -220 6092 5639 2481 102 16 31 chr5 144009773 144010117 -59075415 - THE1C LTR MaLR 0 375 36 1614 203 7 0 chr5 144010117 144010427 -59075105 + AluSx SINE Alu 1 312 0 2481 102 16 31 chr5 144010427 144010463 -59075069 - THE1C LTR MaLR -339 36 1 4179 163 56 9 chr5 144010463 144010870 -59074662 - L1MA9 LINE L1 -673 5639 5168 310 207 122 0 chr5 144010873 144010955 -59074577 + L1 LINE L1 3218 3309 -2837 4286 116 26 16 chr5 144010963 144011664 -59073868 - L1PB1 LINE L1 0 6151 5444 542 185 0 19 chr5 144011664 144011772 -59073760 - L1P5 LINE L1 -526 5625 5520 * 549 133 22 0 chr5 144011753 144011843 -59073689 - L1PB1 LINE L1 -910 5236 5145 308 219 80 7 chr5 144011832 144011969 -59073563 + L1 LINE L1 2402 2548 -3598 * 734 276 31 8 chr5 144012092 144012346 -59073186 + L1 LINE L1 4912 5171 -975 25 51 0 0 chr5 144013296 144013335 -59072197 + AT_rich Low_complexity Low_complexity 1 39 0 249 337 69 0 chr5 144013715 144013816 -59071716 - MIR SINE MIR -18 244 137 6727 96 10 5 chr5 144013899 144015006 -59070526 - L1PA7 LINE L1 0 6154 5042 1222 198 8 5 chr5 144015234 144016404 -59069128 - L1P5 LINE L1 -743 5403 4138 590 275 114 58 chr5 144016425 144017076 -59068456 - HAL1 LINE L1 -828 1679 993 1422 210 14 18 chr5 144017476 144017757 -59067775 - AluJo SINE Alu -31 281 2 196 299 112 28 chr5 144019090 144019197 -59066335 + L2 LINE L2 3156 3271 -1 22 0 0 0 chr5 144019643 144019665 -59065867 + AT_rich Low_complexity Low_complexity 1 22 0 205 384 66 25 chr5 144020708 144021101 -59064431 + L2 LINE L2 1256 1664 -1650 701 349 112 8 chr5 144021104 144021614 -59063918 + L2 LINE L2 2331 2893 -421 195 276 197 24 chr5 144022248 144022375 -59063157 - MIR3 SINE MIR -41 167 19 309 242 0 0 chr5 144022776 144022867 -59062665 + (TATG)n Simple_repeat Simple_repeat 4 94 0 369 318 45 17 chr5 144023945 144024121 -59061411 + MIR3 SINE MIR 17 197 -11 229 318 16 0 chr5 144025022 144025085 -59060447 + L2 LINE L2 3204 3267 -5 366 295 107 7 chr5 144025149 144025298 -59060234 + MIR SINE MIR 43 206 -56 2432 204 10 24 chr5 144025980 144026564 -59058968 - L1P LINE L1 -1957 4189 3614 1662 202 0 0 chr5 144026639 144026943 -59058589 - AluJb SINE Alu 0 304 1 28 29 0 0 chr5 144027024 144027059 -59058473 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 144027735 144027756 -59057776 + AT_rich Low_complexity Low_complexity 1 21 0 574 160 10 10 chr5 144028538 144028638 -59056894 + L2 LINE L2 3214 3313 0 976 174 37 5 chr5 144029062 144029252 -59056280 - MSTD LTR MaLR 0 396 201 1336 115 11 0 chr5 144029260 144029451 -59056081 - AluSp SINE Alu -9 304 112 696 200 40 20 chr5 144029468 144029618 -59055914 - MSTD LTR MaLR -243 153 1 502 287 22 0 chr5 144029679 144029815 -59055717 + MIR SINE MIR 59 197 -65 580 270 108 10 chr5 144029818 144030022 -59055510 - MER58A DNA MER1_type 0 224 1 279 71 0 0 chr5 144030366 144030408 -59055124 + (TG)n Simple_repeat Simple_repeat 2 43 0 265 383 23 23 chr5 144031130 144031305 -59054227 - L2 LINE L2 -557 2757 2583 323 261 0 0 chr5 144031718 144031787 -59053745 + GA-rich Low_complexity Low_complexity 1 69 0 243 285 46 31 chr5 144031987 144032117 -59053415 + MER4E LTR ERV1 275 406 -360 413 346 42 42 chr5 144033035 144033252 -59052280 - MIR SINE MIR -38 224 8 10319 42 0 2 chr5 144033274 144034557 -59050975 - L1P LINE L1 -3558 2588 1308 4006 42 16 0 chr5 144034557 144035056 -59050476 + L1PA4 LINE L1 5646 6152 -3 865 239 70 6 chr5 144035056 144035457 -59050075 - L1ME LINE L1 -611 5553 5130 486 96 0 0 chr5 144035499 144035572 -59049960 - Alu SINE Alu 0 311 239 223 250 0 0 chr5 144035610 144035654 -59049878 + polypyrimidine Low_complexity Low_complexity 4 47 0 216 216 11 45 chr5 144035840 144035928 -59049604 + CT-rich Low_complexity Low_complexity 1 85 0 246 105 0 0 chr5 144035936 144035974 -59049558 + (TC)n Simple_repeat Simple_repeat 1 38 0 376 337 45 30 chr5 144035995 144036197 -59049335 + MIR SINE MIR 21 225 -37 186 43 0 0 chr5 144036754 144036777 -59048755 + (CA)n Simple_repeat Simple_repeat 1 23 0 5389 48 3 5 chr5 144037518 144038180 -59047352 - L1PA6 LINE L1 -4 6150 5490 370 277 82 40 chr5 144038272 144038615 -59046917 - L1MC4a LINE L1 -307 5814 5525 481 279 68 89 chr5 144038745 144039228 -59046304 - L1MC4a LINE L1 -813 5333 4861 273 370 22 0 chr5 144039574 144039712 -59045820 + L2 LINE L2 2794 2934 -380 23 0 0 0 chr5 144039799 144039822 -59045710 + AT_rich Low_complexity Low_complexity 1 23 0 639 249 92 57 chr5 144040597 144040878 -59044654 - AluJb SINE Alu -7 295 5 29 0 0 0 chr5 144040883 144040912 -59044620 + AT_rich Low_complexity Low_complexity 1 29 0 874 212 35 49 chr5 144041194 144041420 -59044112 - AluJo SINE Alu -84 228 6 1712 145 37 10 chr5 144041432 144041728 -59043804 - AluSg SINE Alu -6 304 1 428 216 18 9 chr5 144043215 144043326 -59042206 + L1MA9 LINE L1 6163 6274 -38 26 0 0 0 chr5 144043326 144043352 -59042180 + AT_rich Low_complexity Low_complexity 1 26 0 2154 85 7 0 chr5 144045710 144045991 -59039541 + AluSc SINE Alu 27 309 0 185 88 29 29 chr5 144047487 144047521 -59038011 + MER5A DNA MER1_type 42 75 -114 * 451 233 19 10 chr5 144047513 144047616 -59037916 - MER5A DNA MER1_type -77 112 9 9072 227 29 114 chr5 144047857 144051654 -59033878 + L1PA15 LINE L1 1 4119 -2678 9703 122 40 12 chr5 144051654 144053191 -59032341 - THE1C-int LTR MaLR 0 1580 1 2047 142 46 22 chr5 144053191 144053557 -59031975 - THE1C LTR MaLR 0 375 1 9072 227 29 114 chr5 144053557 144055428 -59030104 + L1PA15 LINE L1 4117 5624 -1173 831 156 143 0 chr5 144055430 144055584 -59029948 - THE1C LTR MaLR 0 375 200 4815 176 19 20 chr5 144055745 144056056 -59029476 + L1PA15 LINE L1 5627 5937 -879 1933 152 146 8 chr5 144056056 144056432 -59029100 + MSTA LTR MaLR 1 428 0 4815 176 19 20 chr5 144056432 144057276 -59028256 + L1PA15 LINE L1 5937 6780 -36 1963 113 14 7 chr5 144057460 144057770 -59027762 - AluSq SINE Alu 0 312 1 2086 152 46 38 chr5 144058987 144059440 -59026092 + MSTB2 LTR MaLR 1 457 0 206 289 47 101 chr5 144059603 144059901 -59025631 + L2 LINE L2 2365 2646 -668 22 0 0 0 chr5 144060944 144060966 -59024566 + AT_rich Low_complexity Low_complexity 1 22 0 273 307 154 64 chr5 144062405 144062737 -59022795 - L2 LINE L2 -224 3089 2709 1834 187 5 16 chr5 144062737 144063106 -59022426 - MLT1A1 LTR MaLR 0 365 1 273 307 154 64 chr5 144063106 144063283 -59022249 - L2 LINE L2 -604 2709 2549 3901 92 7 15 chr5 144063603 144064190 -59021342 - L1PA5 LINE L1 -23 6131 5550 3373 47 16 0 chr5 144064189 144064615 -59020917 + L1P LINE L1 4551 4983 -1163 * 281 308 48 27 chr5 144064704 144064850 -59020682 - MLT1K LTR MaLR -45 543 395 370 306 11 22 chr5 144064965 144065145 -59020387 + CT-rich Low_complexity Low_complexity 1 178 0 485 328 32 47 chr5 144065349 144065602 -59019930 - MIR SINE MIR 0 262 14 22 0 0 0 chr5 144066165 144066187 -59019345 + AT_rich Low_complexity Low_complexity 1 22 0 222 37 0 0 chr5 144067215 144067242 -59018290 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 347 306 121 33 chr5 144069071 144069401 -59016131 - LTR16A LTR ERVL -81 369 11 1304 318 36 69 chr5 144070769 144071708 -59013824 - L2 LINE L2 -4 3309 2414 234 0 0 0 chr5 144072199 144072225 -59013307 + (T)n Simple_repeat Simple_repeat 1 26 0 262 269 109 34 chr5 144072894 144073013 -59012519 + MIR3 SINE MIR 14 141 -67 35 54 0 0 chr5 144073983 144074039 -59011493 + AT_rich Low_complexity Low_complexity 1 56 0 1499 169 3 38 chr5 144075790 144076080 -59009452 + AluJo SINE Alu 28 307 -5 776 172 135 18 chr5 144076169 144076332 -59009200 - AluJb SINE Alu -126 186 5 802 234 97 57 chr5 144077576 144077875 -59007657 + LTR16A1 LTR ERVL 11 321 -136 1686 170 14 3 chr5 144078515 144078798 -59006734 + AluJo SINE Alu 1 286 -26 40 59 0 0 chr5 144079797 144079865 -59005667 + AT_rich Low_complexity Low_complexity 1 68 0 783 330 115 32 chr5 144080509 144081102 -59004430 - L2 LINE L2 -960 2354 1713 420 360 102 16 chr5 144081104 144081534 -59003998 - L2 LINE L2 -2310 1004 538 804 174 7 14 chr5 144081539 144081714 -59003818 - AluJb SINE Alu 0 312 139 432 326 92 43 chr5 144081755 144082123 -59003409 - L2 LINE L2 -2834 480 95 44 63 0 0 chr5 144083457 144083536 -59001996 + AT_rich Low_complexity Low_complexity 1 79 0 34 42 0 0 chr5 144083560 144083608 -59001924 + AT_rich Low_complexity Low_complexity 1 48 0 25 51 0 0 chr5 144083666 144083705 -59001827 + AT_rich Low_complexity Low_complexity 1 39 0 1121 127 26 11 chr5 144085355 144085544 -58999988 + L1MA7 LINE L1 5955 6146 -145 201 94 0 0 chr5 144085549 144085581 -58999951 + (CA)n Simple_repeat Simple_repeat 1 32 0 324 307 83 40 chr5 144087453 144087730 -58997802 + L1ME4a LINE L1 5746 6034 -87 401 362 73 12 chr5 144090456 144090702 -58994830 - HAL1 LINE L1 -1095 1412 1152 251 226 82 57 chr5 144090711 144090870 -58994662 - L1MDa LINE L1 -5104 1436 1274 405 291 106 91 chr5 144091024 144091278 -58994254 + MIR SINE MIR 3 260 -2 627 281 7 0 chr5 144093271 144093424 -58992108 + MIR SINE MIR 57 210 -52 2450 65 7 3 chr5 144093477 144093786 -58991746 - AluY SINE Alu -1 310 1 264 30 0 0 chr5 144094463 144094496 -58991036 + (GA)n Simple_repeat Simple_repeat 2 34 0 2069 133 7 0 chr5 144094908 144095208 -58990324 + AluSq SINE Alu 1 302 -11 693 203 135 36 chr5 144095263 144095485 -58990047 - MLT1D LTR MaLR -2 503 260 2042 176 63 18 chr5 144095540 144095938 -58989594 + MLT2C2 LTR ERVL 1 416 -48 353 177 13 0 chr5 144095940 144096019 -58989513 + CT-rich Low_complexity Low_complexity 1 80 0 250 133 22 0 chr5 144096040 144096085 -58989447 + MLT2C2 LTR ERVL 399 444 0 * 298 255 31 133 chr5 144096085 144096263 -58989269 - MLT1D LTR MaLR -347 158 1 8345 193 17 5 chr5 144096553 144099112 -58986420 + L1PB4 LINE L1 3562 6147 -9 233 69 0 0 chr5 144099145 144099174 -58986358 - L1PA6 LINE L1 -17 6137 6109 1245 183 110 55 chr5 144100177 144100522 -58985010 - MLT1A1 LTR MaLR -1 364 1 242 345 129 12 chr5 144100798 144100969 -58984563 - MIR SINE MIR -18 244 54 320 309 24 32 chr5 144102911 144103034 -58982498 - MIR SINE MIR -57 151 30 546 270 5 82 chr5 144104119 144104315 -58981217 - L2 LINE L2 -2838 476 296 222 293 57 32 chr5 144105403 144105526 -58980006 + L2 LINE L2 3188 3313 0 767 155 9 0 chr5 144105931 144106047 -58979485 + FLAM_C SINE Alu 1 117 -16 38 0 0 0 chr5 144106048 144106086 -58979446 + AT_rich Low_complexity Low_complexity 1 38 0 205 85 0 64 chr5 144107580 144107627 -58977905 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 336 24 0 0 chr5 144108100 144108141 -58977391 + (TG)n Simple_repeat Simple_repeat 2 42 0 4335 151 58 16 chr5 144108142 144109363 -58976169 - L1MA7 LINE L1 -502 5789 4512 2364 148 26 30 chr5 144109363 144109854 -58975678 + L1MA7 LINE L1 5794 6290 -1 1657 129 4 0 chr5 144109855 144110088 -58975444 - AluSx SINE Alu -17 295 62 638 164 9 0 chr5 144110089 144110205 -58975327 + L1M2 LINE L1 5473 5589 -702 281 163 0 0 chr5 144110205 144110248 -58975284 - Alu SINE Alu -258 43 1 230 267 60 60 chr5 144110357 144110507 -58975025 - MIR SINE MIR -57 205 56 2053 144 0 0 chr5 144110627 144110933 -58974599 - AluSx SINE Alu -6 306 1 262 330 42 34 chr5 144111470 144111588 -58973944 + MIR SINE MIR 72 190 -72 197 280 0 0 chr5 144112688 144112738 -58972794 + L2 LINE L2 2925 2974 -298 183 80 0 0 chr5 144112863 144112888 -58972644 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 144113131 144113152 -58972380 + AT_rich Low_complexity Low_complexity 1 21 0 2505 24 0 0 chr5 144113379 144113670 -58971862 + L1PA3 LINE L1 5862 6152 -3 26 30 0 0 chr5 144113670 144113703 -58971829 + AT_rich Low_complexity Low_complexity 1 33 0 236 228 0 0 chr5 144114353 144114410 -58971122 - L1MC4 LINE L1 -1339 6703 6647 664 321 73 0 chr5 144114515 144114733 -58970799 - MIR SINE MIR -1 261 28 388 333 126 13 chr5 144116139 144116370 -58969162 + MIR SINE MIR 3 259 -3 459 118 0 0 chr5 144116596 144116672 -58968860 + (CA)n Simple_repeat Simple_repeat 2 77 0 266 316 115 7 chr5 144117288 144117359 -58968173 + MIR SINE MIR 74 136 -126 1715 211 70 84 chr5 144117359 144118012 -58967520 - LTR48B LTR ERV1 0 644 1 266 316 115 7 chr5 144118012 144118079 -58967453 + MIR SINE MIR 136 227 -35 2264 134 20 3 chr5 144118083 144118441 -58967091 + THE1B LTR MaLR 1 364 0 235 156 0 0 chr5 144119411 144119456 -58966076 - LTR66 LTR ERVL -172 438 394 608 118 11 0 chr5 144119479 144119600 -58965932 + L1PA10 LINE L1 6060 6181 0 793 145 41 0 chr5 144120821 144120966 -58964566 + L1MA6 LINE L1 6089 6239 -61 1159 96 18 6 chr5 144120967 144121134 -58964398 - MER4E LTR ERV1 0 779 611 212 250 0 0 chr5 144121139 144121203 -58964329 + (TTAA)n Simple_repeat Simple_repeat 4 67 0 380 193 103 3 chr5 144121220 144121336 -58964196 + MER4E LTR ERV1 389 683 -96 * 2042 127 14 93 chr5 144121324 144121741 -58963791 - MER4B LTR ERV1 -225 385 2 382 123 0 0 chr5 144121741 144121806 -58963726 + L1MA7 LINE L1 6227 6291 0 8826 26 1 0 chr5 144122018 144123099 -58962433 - L1PA3 LINE L1 -2841 3305 2224 17266 29 5 0 chr5 144123099 144125945 -58959587 + L1PA3 LINE L1 3309 6152 -3 29 0 0 0 chr5 144125945 144125974 -58959558 + AT_rich Low_complexity Low_complexity 1 29 0 384 77 0 0 chr5 144127674 144127726 -58957806 + (CA)n Simple_repeat Simple_repeat 2 53 0 186 283 274 0 chr5 144128168 144128274 -58957258 + MIR SINE MIR 122 256 -6 3110 145 8 0 chr5 144129207 144129696 -58955836 - LOR1a LTR ERV1 -4 493 1 232 360 64 0 chr5 144130105 144130230 -58955302 - MIR SINE MIR -48 214 82 4268 212 67 101 chr5 144131076 144132749 -58952783 + L1MC4a LINE L1 5975 7604 -204 1664 144 4 0 chr5 144132749 144132999 -58952533 - AluY SINE Alu -26 285 35 4268 212 67 101 chr5 144132999 144133196 -58952336 + L1MC4a LINE L1 7604 7806 -2 1296 184 7 55 chr5 144134215 144134284 -58951248 - L1MD1 LINE L1 0 6242 6171 2317 65 7 10 chr5 144134284 144134591 -58950941 + AluY SINE Alu 1 306 -5 1296 184 7 55 chr5 144134591 144134830 -58950702 - L1MD1 LINE L1 -71 6171 5949 334 323 36 62 chr5 144135008 144135200 -58950332 + MIR SINE MIR 39 225 -37 1884 63 4 52 chr5 144136751 144137022 -58948510 - AluY SINE Alu -18 293 36 417 287 40 46 chr5 144137178 144137352 -58948180 - MIR SINE MIR 0 262 90 182 0 107 0 chr5 144137758 144137786 -58947746 + T-rich Low_complexity Low_complexity 6 36 0 1400 115 43 16 chr5 144138025 144138278 -58947254 - L1MA8 LINE L1 -5 6286 6027 206 191 24 0 chr5 144141743 144141785 -58943747 + CT-rich Low_complexity Low_complexity 1 43 0 624 221 37 58 chr5 144142996 144143186 -58942346 - L2 LINE L2 -50 3263 3078 24 53 0 0 chr5 144144028 144144066 -58941466 + AT_rich Low_complexity Low_complexity 1 38 0 22 70 0 0 chr5 144144902 144144945 -58940587 + AT_rich Low_complexity Low_complexity 1 43 0 54 16 0 0 chr5 144147477 144147538 -58937994 + AT_rich Low_complexity Low_complexity 1 61 0 469 287 98 12 chr5 144148151 144148315 -58937217 + MER5B DNA MER1_type 1 178 0 391 284 139 41 chr5 144148453 144148631 -58936901 - MIR SINE MIR -25 237 41 185 320 20 0 chr5 144148631 144148681 -58936851 + MER5A DNA MER1_type 4 54 -135 539 256 32 32 chr5 144148916 144149072 -58936460 - MER5A DNA MER1_type -32 157 2 738 44 0 0 chr5 144150965 144151055 -58934477 + 5S rRNA rRNA 1 90 -31 459 267 0 0 chr5 144151081 144151182 -58934350 + MIR SINE MIR 132 232 -30 485 308 77 26 chr5 144153856 144154051 -58931481 - MIR3 SINE MIR 0 208 4 2082 181 40 7 chr5 144154410 144154814 -58930718 + MSTB LTR MaLR 6 422 -4 323 221 35 0 chr5 144154993 144155079 -58930453 - L1MC4 LINE L1 -1340 6702 6614 300 211 0 56 chr5 144155001 144155091 -58930441 + L1MC4 LINE L1 6619 6703 -1339 * 341 264 64 8 chr5 144155534 144155659 -58929873 + MER94 DNA DNA 3 134 0 358 317 24 8 chr5 144155690 144155813 -58929719 - MIR SINE MIR -118 144 20 21 71 0 0 chr5 144156661 144156703 -58928829 + AT_rich Low_complexity Low_complexity 1 42 0 222 91 0 0 chr5 144157045 144157078 -58928454 + (A)n Simple_repeat Simple_repeat 1 33 0 737 240 14 41 chr5 144157097 144157318 -58928214 + MIR SINE MIR 7 221 -41 204 216 0 0 chr5 144157325 144157362 -58928170 + GA-rich Low_complexity Low_complexity 2 38 0 302 389 7 21 chr5 144157380 144157524 -58928008 + MER91A DNA MER1_type 33 174 -22 260 227 15 30 chr5 144157676 144157742 -58927790 - MER5A DNA MER1_type -1 188 124 186 283 0 17 chr5 144158525 144158585 -58926947 - L2 LINE L2 -1 3312 3254 243 88 0 0 chr5 144158721 144158755 -58926777 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1865 160 77 0 chr5 144159877 144160190 -58925342 - MER1B DNA MER1_type -2 337 1 2169 68 65 7 chr5 144160338 144160630 -58924902 + AluY SINE Alu 1 309 -2 2011 130 0 7 chr5 144161020 144161319 -58924213 - AluSx SINE Alu -14 298 2 510 101 38 0 chr5 144161342 144161421 -58924111 + L1PA7 LINE L1 6070 6151 -3 440 188 0 0 chr5 144161561 144161641 -58923891 + AluJ/FLAM SINE Alu 1 80 -232 985 218 0 0 chr5 144161800 144161979 -58923553 + AluJo SINE Alu 104 282 -30 435 83 0 0 chr5 144161979 144162039 -58923493 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 275 130 19 0 chr5 144163115 144163169 -58922363 + GA-rich Low_complexity Low_complexity 2 56 0 287 260 52 0 chr5 144163302 144163398 -58922134 + MER94 DNA DNA 1 101 -33 225 0 0 0 chr5 144164792 144164817 -58920715 + (TG)n Simple_repeat Simple_repeat 1 25 0 2135 205 42 34 chr5 144164870 144165422 -58920110 + L1MA10 LINE L1 5776 6331 -3 26 30 0 0 chr5 144166198 144166231 -58919301 + AT_rich Low_complexity Low_complexity 1 33 0 201 353 42 17 chr5 144166241 144166360 -58919172 + MIR SINE MIR 20 141 -67 430 321 204 24 chr5 144167613 144168030 -58917502 + L2 LINE L2 2277 2768 -546 546 296 58 6 chr5 144168068 144168240 -58917292 - MIR SINE MIR -56 206 26 404 253 12 0 chr5 144168319 144168402 -58917130 + L2 LINE L2 3187 3270 -43 383 298 174 21 chr5 144168548 144168790 -58916742 + L2 LINE L2 3031 3309 -4 225 323 21 68 chr5 144168866 144169058 -58916474 - L2 LINE L2 0 3313 3131 712 160 68 143 chr5 144169220 144169457 -58916075 + MER20 DNA MER1_type 1 219 0 2344 109 0 0 chr5 144170052 144170364 -58915168 + AluSx SINE Alu 1 312 0 404 286 55 82 chr5 144170529 144170784 -58914748 - MIR SINE MIR -9 253 6 254 277 0 12 chr5 144171614 144171697 -58913835 + (TA)n Simple_repeat Simple_repeat 2 83 0 228 258 0 0 chr5 144171745 144171807 -58913725 - L1MC4 LINE L1 -1340 6702 6641 333 322 139 72 chr5 144172505 144173150 -58912382 - L2 LINE L2 -14 3258 2554 23 33 0 0 chr5 144173355 144173385 -58912147 + AT_rich Low_complexity Low_complexity 1 30 0 441 313 126 0 chr5 144173814 144174028 -58911504 - L3 LINE CR1 -214 1363 1123 530 259 49 121 chr5 144174111 144174559 -58910973 - Charlie8 DNA MER1_type -1929 488 73 1269 189 3 113 chr5 144175426 144175797 -58909735 - MER7A DNA MER2_type -1 345 18 1092 222 111 50 chr5 144179936 144180271 -58905261 - L1ME3A LINE L1 -198 5972 5602 873 129 0 0 chr5 144180271 144180410 -58905122 + (TA)n Simple_repeat Simple_repeat 1 139 0 1092 222 111 50 chr5 144180410 144180514 -58905018 - L1ME3A LINE L1 -568 5602 5506 5444 155 27 30 chr5 144180884 144181344 -58904188 + L1MA6 LINE L1 4292 4752 -1548 2663 116 7 25 chr5 144181344 144181775 -58903757 - MSTA LTR MaLR -1 427 5 5444 155 27 30 chr5 144181775 144183327 -58902205 + L1MA6 LINE L1 4752 6299 -1 2171 105 0 0 chr5 144183342 144183656 -58901876 - AluSq SINE Alu 0 314 1 1262 187 9 4 chr5 144184108 144184333 -58901199 - MSTB LTR MaLR 0 426 201 5423 102 10 0 chr5 144184421 144185705 -58899827 - L1PA13 LINE L1 -5 6158 4906 531 136 0 0 chr5 144185709 144185790 -58899742 - MSTB-int LTR MaLR -1570 81 1 2321 151 36 12 chr5 144185790 144186206 -58899326 - MSTB LTR MaLR 0 426 1 303 264 264 26 chr5 144186496 144186689 -58898843 + L1ME4a LINE L1 5881 6119 -2 30 0 0 0 chr5 144186941 144186971 -58898561 + AT_rich Low_complexity Low_complexity 1 30 0 418 241 60 52 chr5 144188004 144188071 -58897461 - L2 LINE L2 -3 3310 3240 2364 138 16 5 chr5 144188071 144188442 -58897090 - THE1C LTR MaLR 0 375 1 418 241 60 52 chr5 144188442 144188490 -58897042 - L2 LINE L2 -73 3240 3194 218 287 220 20 chr5 144188599 144188749 -58896783 + MER5A DNA MER1_type 10 189 0 1670 145 0 68 chr5 144189507 144189803 -58895729 + AluSx SINE Alu 1 276 -36 224 239 28 0 chr5 144190340 144190411 -58895121 + (TTTG)n Simple_repeat Simple_repeat 4 76 0 235 200 0 158 chr5 144190421 144190471 -58895061 + Charlie8 DNA MER1_type 94 125 -205 2010 129 4 0 chr5 144190471 144190779 -58894753 - AluSx SINE Alu 0 309 1 235 200 0 158 chr5 144190779 144190822 -58894710 + Charlie8 DNA MER1_type 125 173 -157 492 246 183 0 chr5 144191442 144191568 -58893964 - MER5A DNA MER1_type -8 181 33 313 302 74 27 chr5 144192974 144193123 -58892409 - MIR SINE MIR -40 222 67 198 349 174 0 chr5 144193424 144193596 -58891936 - MIR SINE MIR -14 248 47 234 337 124 30 chr5 144193662 144193831 -58891701 + L3 LINE CR1 604 788 -789 406 341 165 32 chr5 144193847 144194193 -58891339 + L3 LINE CR1 1054 1445 -132 3684 119 34 42 chr5 144194196 144194836 -58890696 - MER41B LTR ERV1 0 635 1 247 236 42 28 chr5 144194862 144194934 -58890598 + MIR SINE MIR 13 85 -177 204 97 0 0 chr5 144195347 144195378 -58890154 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1708 163 4 4 chr5 144195380 144195657 -58889875 - AluJb SINE Alu -30 282 6 1985 146 3 3 chr5 144195718 144196027 -58889505 - AluJb SINE Alu -3 309 1 2434 78 0 0 chr5 144197458 144197766 -58887766 - AluY SINE Alu -3 308 1 286 250 0 0 chr5 144197857 144197929 -58887603 - L1M4 LINE L1 -1305 4841 4770 1911 167 0 6 chr5 144198319 144198631 -58886901 + AluJo SINE Alu 1 310 -2 22 56 0 0 chr5 144198818 144198854 -58886678 + AT_rich Low_complexity Low_complexity 1 36 0 232 301 24 12 chr5 144198916 144198999 -58886533 - MIR SINE MIR -109 153 70 180 77 0 0 chr5 144199088 144199114 -58886418 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 918 171 0 0 chr5 144199115 144199261 -58886271 - FRAM SINE Alu -30 146 1 341 324 183 40 chr5 144201229 144201870 -58883662 - L2 LINE L2 -32 3240 2535 254 284 0 12 chr5 144202223 144202304 -58883228 + (TA)n Simple_repeat Simple_repeat 1 80 0 24 32 0 0 chr5 144202753 144202784 -58882748 + AT_rich Low_complexity Low_complexity 1 31 0 396 145 231 34 chr5 144203525 144203642 -58881890 - MER67D LTR ERV1 -4 510 371 321 182 15 0 chr5 144203683 144203749 -58881783 - L1MA9 LINE L1 -38 6274 6208 1898 177 23 58 chr5 144203751 144204146 -58881386 - MER67D LTR ERV1 -133 381 1 218 297 0 31 chr5 144204370 144204434 -58881098 - MIR SINE MIR 0 262 201 34 42 0 0 chr5 144205244 144205292 -58880240 + AT_rich Low_complexity Low_complexity 1 48 0 404 246 115 8 chr5 144205430 144205552 -58879980 + L2 LINE L2 3179 3313 0 28 0 0 0 chr5 144206525 144206553 -58878979 + AT_rich Low_complexity Low_complexity 1 28 0 5049 151 14 6 chr5 144206553 144207423 -58878109 - L1PB4 LINE L1 -3 6153 5277 270 293 55 28 chr5 144208429 144208610 -58876922 - MLT1K LTR MaLR 0 588 403 1898 163 0 22 chr5 144208874 144209193 -58876339 - AluJo SINE Alu 0 312 1 1729 171 13 0 chr5 144209198 144209496 -58876036 - L1MB2 LINE L1 -46 6125 5824 1067 171 49 83 chr5 144209848 144210112 -58875420 - L1MD2 LINE L1 -1 6358 6104 759 274 44 20 chr5 144211230 144211478 -58874054 - MIR SINE MIR 0 262 9 1107 103 6 0 chr5 144211540 144211705 -58873827 - L1P LINE L1 -3584 2562 2397 7926 81 23 2 chr5 144211709 144213545 -58871987 + L1PA7 LINE L1 4281 6140 -14 324 211 0 0 chr5 144213735 144213811 -58871721 + (TA)n Simple_repeat Simple_repeat 2 77 0 1633 256 72 25 chr5 144213945 144214598 -58870934 - HAL1 LINE L1 -755 1752 1069 573 110 0 0 chr5 144214726 144214817 -58870715 + (TA)n Simple_repeat Simple_repeat 1 91 0 2334 71 10 0 chr5 144214817 144215114 -58870418 - AluY SINE Alu -11 300 1 499 323 71 16 chr5 144215474 144215728 -58869804 - HAL1 LINE L1 -2238 269 2 400 290 6 23 chr5 144216900 144217076 -58868456 - L1MB8 LINE L1 0 6178 6006 1730 148 24 10 chr5 144217136 144217433 -58868099 + AluJo SINE Alu 3 303 -9 30 0 0 0 chr5 144217832 144217862 -58867670 + AT_rich Low_complexity Low_complexity 1 30 0 183 42 0 0 chr5 144218015 144218039 -58867493 + (TC)n Simple_repeat Simple_repeat 1 24 0 1994 282 96 26 chr5 144218159 144219318 -58866214 - L1ME3A LINE L1 -44 6126 4885 207 279 0 16 chr5 144219644 144219705 -58865827 + CT-rich Low_complexity Low_complexity 1 60 0 1434 163 47 78 chr5 144220231 144220618 -58864914 + L1MA8 LINE L1 5912 6286 -5 31 26 0 0 chr5 144220618 144220656 -58864876 + AT_rich Low_complexity Low_complexity 1 38 0 240 119 51 0 chr5 144222407 144222466 -58863066 + (TTA)n Simple_repeat Simple_repeat 2 63 0 22 35 0 0 chr5 144222910 144222939 -58862593 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 144223514 144223536 -58861996 + AT_rich Low_complexity Low_complexity 1 22 0 234 197 0 82 chr5 144223889 144223950 -58861582 - L1MB8 LINE L1 -1883 5925 5870 463 328 50 15 chr5 144224998 144225199 -58860333 - MIR SINE MIR -15 247 40 180 178 111 22 chr5 144225870 144225915 -58859617 - L3 LINE CR1 -162 1415 1367 183 80 0 0 chr5 144227186 144227211 -58858321 + (CAA)n Simple_repeat Simple_repeat 3 27 0 262 278 206 8 chr5 144228819 144228945 -58856587 - MIR SINE MIR -2 260 110 2132 123 3 0 chr5 144229765 144230074 -58855458 + AluSx SINE Alu 1 310 -2 2506 56 0 10 chr5 144230517 144230823 -58854709 - AluY SINE Alu -8 303 1 487 303 47 92 chr5 144231095 144231679 -58853853 + L2 LINE L2 2725 3275 -38 21 0 0 0 chr5 144233772 144233793 -58851739 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 144234702 144234732 -58850800 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 144235333 144235366 -58850166 + AT_rich Low_complexity Low_complexity 1 33 0 865 249 170 50 chr5 144235458 144235940 -58849592 - MLT1H1 LTR MaLR 0 555 16 650 289 28 5 chr5 144237731 144237942 -58847590 - MIR SINE MIR 0 262 47 1907 232 96 37 chr5 144238172 144238333 -58847199 - L1ME3 LINE L1 0 6162 6012 2551 117 0 11 chr5 144238333 144238701 -58846831 - THE1B LTR MaLR 0 364 1 10621 115 4 30 chr5 144238701 144240322 -58845210 - THE1B-int LTR MaLR 0 1580 1 2391 118 34 8 chr5 144240322 144240677 -58844855 - THE1B LTR MaLR 0 364 1 1907 232 96 37 chr5 144240677 144241223 -58844309 - L1ME3 LINE L1 -149 6013 5411 348 278 60 40 chr5 144241314 144241616 -58843916 - L1ME LINE L1 -5205 865 558 21 0 0 0 chr5 144243054 144243075 -58842457 + AT_rich Low_complexity Low_complexity 1 21 0 405 266 16 8 chr5 144243355 144243479 -58842053 - LTR33 LTR ERVL -5 516 392 244 280 40 20 chr5 144243631 144243731 -58841801 + Charlie2 DNA MER1_type 46 147 -2635 1770 106 24 16 chr5 144243742 144244028 -58841504 - AluSc SINE Alu 0 326 39 460 234 48 28 chr5 144244065 144244210 -58841322 + Charlie2 DNA MER1_type 433 580 -2282 * 564 326 55 11 chr5 144244202 144244475 -58841057 - LTR33 LTR ERVL -234 287 3 212 179 0 0 chr5 144244566 144244605 -58840927 + (TA)n Simple_repeat Simple_repeat 2 40 0 203 311 9 19 chr5 144244651 144244751 -58840781 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 2208 173 23 23 chr5 144244751 144245185 -58840347 - Tigger2a DNA MER2_type 0 434 1 1639 205 62 9 chr5 144245519 144245860 -58839672 - MLT1A1 LTR MaLR -6 359 1 285 341 0 0 chr5 144245891 144245976 -58839556 + L2 LINE L2 3188 3272 0 861 175 0 50 chr5 144246505 144246665 -58838867 - FRAM SINE Alu -25 151 1 449 310 86 5 chr5 144246691 144246878 -58838654 - MIR SINE MIR -1 261 60 277 303 105 12 chr5 144248151 144248313 -58837219 - LTR16C LTR ERVL -2 489 313 1588 136 92 73 chr5 144248386 144248754 -58836778 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr5 144248947 144248972 -58836560 + AT_rich Low_complexity Low_complexity 1 25 0 1947 161 71 22 chr5 144249364 144249894 -58835638 - MLT2A2 LTR ERVL 0 554 3 2314 88 0 3 chr5 144249898 144250194 -58835338 - AluSg SINE Alu -15 295 1 664 318 77 58 chr5 144250341 144250807 -58834725 + ERVL LTR ERVL 3261 3735 -2029 605 329 23 36 chr5 144251006 144251310 -58834222 + ERVL LTR ERVL 3986 4285 -1479 585 267 58 18 chr5 144251707 144251932 -58833600 + ERVL LTR ERVL 4821 5054 -710 232 303 28 21 chr5 144252713 144252855 -58832677 + L1 LINE L1 2635 2777 -3369 889 269 79 86 chr5 144253719 144253897 -58831635 - L2 LINE L2 0 3313 3135 2045 133 3 37 chr5 144253897 144254221 -58831311 + AluSq SINE Alu 1 313 0 948 89 0 58 chr5 144254231 144254422 -58831110 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 889 269 79 86 chr5 144254422 144254858 -58830674 - L2 LINE L2 -187 3126 2691 316 375 46 26 chr5 144255444 144255596 -58829936 + L2 LINE L2 3099 3253 -19 210 143 0 0 chr5 144255877 144255912 -58829620 + (TA)n Simple_repeat Simple_repeat 1 35 0 229 230 54 27 chr5 144255980 144256054 -58829478 - MIR SINE MIR -14 248 173 188 281 44 70 chr5 144256841 144256955 -58828577 + MIR SINE MIR 135 245 -17 192 125 0 0 chr5 144256960 144256992 -58828540 + (CAT)n Simple_repeat Simple_repeat 2 33 0 306 340 170 22 chr5 144257099 144257370 -58828162 + HAL1 LINE L1 84 394 -2113 769 278 101 25 chr5 144257489 144257895 -58827637 + Charlie8 DNA MER1_type 606 1042 -1375 3578 98 2 4 chr5 144257952 144258462 -58827070 - L1PA13 LINE L1 -2 6161 5653 261 321 21 21 chr5 144258473 144258613 -58826919 + Charlie8 DNA MER1_type 1051 1190 -1227 359 273 50 14 chr5 144258697 144258836 -58826696 - MLT1L LTR MaLR -10 605 462 1899 272 72 21 chr5 144259145 144259895 -58825637 + Charlie8 DNA MER1_type 1297 2084 -333 34 42 0 0 chr5 144259979 144260027 -58825505 + AT_rich Low_complexity Low_complexity 1 48 0 1489 211 86 94 chr5 144260359 144260881 -58824651 + MLT2B1 LTR ERVL 3 520 0 254 186 0 0 chr5 144261057 144261100 -58824432 - MER5A DNA MER1_type -116 73 31 23 33 0 0 chr5 144262142 144262172 -58823360 + AT_rich Low_complexity Low_complexity 1 30 0 3794 37 0 0 chr5 144262305 144262770 -58822762 - L1PA5 LINE L1 -1299 4847 4383 7374 42 1 0 chr5 144262770 144264066 -58821466 + L1PA5 LINE L1 4854 6150 -4 195 42 0 0 chr5 144265013 144265037 -58820495 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2371 84 3 3 chr5 144265544 144265853 -58819679 + AluSc SINE Alu 1 309 0 214 274 0 0 chr5 144266287 144266349 -58819183 + A-rich Low_complexity Low_complexity 2 63 0 628 62 12 0 chr5 144266355 144266435 -58819097 + THE1B LTR MaLR 1 81 -283 1027 166 33 5 chr5 144266685 144266896 -58818636 + L1MA8 LINE L1 6071 6287 -4 21 0 0 0 chr5 144267562 144267583 -58817949 + AT_rich Low_complexity Low_complexity 1 21 0 2096 133 3 0 chr5 144267690 144267984 -58817548 - AluSx SINE Alu -15 297 3 1699 215 73 18 chr5 144268357 144268795 -58816737 - MLT1C LTR MaLR 0 467 6 2337 93 0 6 chr5 144268990 144269301 -58816231 + AluSg SINE Alu 1 309 -1 652 292 67 19 chr5 144269993 144270260 -58815272 + MLT2F LTR ERVL 1 280 -383 546 228 28 33 chr5 144270296 144270476 -58815056 - MER96B DNA MER1_type? -238 179 1 814 305 30 44 chr5 144270478 144270884 -58814648 + MLT2F LTR ERVL 264 663 0 392 320 81 41 chr5 144271275 144271341 -58814191 - L3 LINE CR1 -353 1224 1162 1865 173 9 120 chr5 144271341 144271866 -58813666 - MLT1C LTR MaLR 0 467 1 392 320 81 41 chr5 144271866 144271996 -58813536 - L3 LINE CR1 -415 1162 1020 567 258 8 110 chr5 144272015 144272182 -58813350 - L2 LINE L2 -1 3312 3180 3089 39 16 3 chr5 144272182 144272568 -58812964 + L1PA5 LINE L1 5759 6149 -5 567 258 8 110 chr5 144272568 144272664 -58812868 - L2 LINE L2 -133 3180 3076 579 323 129 26 chr5 144272688 144273190 -58812342 - L2 LINE L2 -378 2936 2383 434 215 174 7 chr5 144273205 144273354 -58812178 - L2 LINE L2 -1274 2040 1867 233 313 42 0 chr5 144273959 144274055 -58811477 - L3 LINE CR1 -1078 499 400 219 389 56 0 chr5 144274289 144274379 -58811153 - L3 LINE CR1 -1423 154 60 259 341 49 8 chr5 144274614 144274737 -58810795 + L2 LINE L2 3182 3309 -4 197 90 64 26 chr5 144275319 144275397 -58810135 + (TTATA)n Simple_repeat Simple_repeat 2 82 0 241 255 5 73 chr5 144275505 144275697 -58809835 + (TA)n Simple_repeat Simple_repeat 1 179 0 186 103 0 0 chr5 144275729 144275758 -58809774 + (CTATT)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr5 144276449 144276475 -58809057 + AT_rich Low_complexity Low_complexity 1 26 0 5009 146 6 8 chr5 144276497 144277298 -58808234 - L1PA16 LINE L1 -5 6161 5362 248 51 0 26 chr5 144277925 144277964 -58807568 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 582 174 9 0 chr5 144277975 144278084 -58807448 - AluJb SINE Alu -202 110 1 287 312 32 8 chr5 144278222 144278347 -58807185 + L1MC4a LINE L1 6042 6169 -1639 2154 124 0 3 chr5 144278351 144278658 -58806874 + AluSx SINE Alu 1 306 -6 893 172 12 6 chr5 144278895 144279058 -58806474 - HERVL74 LTR ERVL -5521 164 1 6449 152 46 9 chr5 144279089 144280259 -58805273 + Ricksha_b DNA DNA 1 1247 -7 2053 160 22 3 chr5 144280266 144280669 -58804863 - MER74C LTR ERVL -10 450 1 368 299 15 37 chr5 144280691 144280825 -58804707 + MER5A DNA MER1_type 54 184 -5 545 263 108 5 chr5 144280832 144281026 -58804506 + MIR SINE MIR 28 241 -21 1858 130 28 0 chr5 144281073 144281357 -58804175 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr5 144281945 144281973 -58803559 + AT_rich Low_complexity Low_complexity 1 28 0 295 117 78 65 chr5 144281973 144282050 -58803482 - L1MA9 LINE L1 0 6312 6235 * 347 111 49 136 chr5 144282047 144282128 -58803404 - L1MA9 LINE L1 -109 6186 6109 12416 105 16 5 chr5 144282576 144285213 -58800319 - L1PA7 LINE L1 -15 6139 3482 1642 185 18 0 chr5 144285296 144285582 -58799950 + AluJo SINE Alu 3 293 -19 354 215 0 0 chr5 144285582 144285661 -58799871 + (CATATA)n Simple_repeat Simple_repeat 5 83 0 497 318 19 43 chr5 144285826 144286084 -58799448 - MIR SINE MIR -4 258 7 569 166 25 38 chr5 144286215 144286372 -58799160 - Charlie5 DNA MER1_type 0 2623 2469 23 33 0 0 chr5 144286500 144286530 -58799002 + AT_rich Low_complexity Low_complexity 1 30 0 1000 142 15 30 chr5 144286670 144286686 -58798846 - L1P5 LINE L1 -660 5496 5481 3054 204 29 1 chr5 144286686 144287347 -58798185 - L1PB4 LINE L1 -2 6154 5476 1590 50 0 0 chr5 144287357 144287557 -58797975 - L1PA4 LINE L1 -3 6152 5953 1000 142 15 30 chr5 144287557 144287726 -58797806 - L1P5 LINE L1 -684 5472 5303 1820 183 50 8 chr5 144288778 144289160 -58796372 - MER63B DNA MER1_type -26 410 13 4863 164 43 27 chr5 144289160 144290138 -58795394 + L1MC3 LINE L1 6791 7784 -1 27 49 0 0 chr5 144290315 144290356 -58795176 + AT_rich Low_complexity Low_complexity 1 41 0 28 95 0 0 chr5 144290879 144290963 -58794569 + AT_rich Low_complexity Low_complexity 1 84 0 242 320 60 0 chr5 144291641 144291741 -58793791 + L2 LINE L2 1896 2001 -1313 5426 166 23 24 chr5 144291800 144292482 -58793050 - L1MA4 LINE L1 -5 6295 5614 2006 155 0 0 chr5 144292482 144292792 -58792740 - AluSg SINE Alu 0 310 1 5426 166 23 24 chr5 144292792 144294578 -58790954 - L1MA4 LINE L1 -686 5614 3734 2208 280 69 55 chr5 144294580 144294910 -58790622 - Charlie2b DNA MER1_type -1209 1573 1249 2057 131 0 0 chr5 144294910 144295238 -58790294 + AluSx SINE Alu 1 328 0 2208 280 69 55 chr5 144295238 144296034 -58789498 - Charlie2b DNA MER1_type -1533 1249 430 305 250 33 11 chr5 144296059 144296151 -58789381 - Charlie2b DNA MER1_type -2627 155 62 181 338 65 65 chr5 144296492 144296646 -58788886 + L2 LINE L2 3116 3269 -3 283 346 150 31 chr5 144296782 144297109 -58788423 - L3 LINE CR1 -171 1406 1041 2258 221 94 44 chr5 144297264 144298085 -58787447 - L1ME1 LINE L1 -148 6018 5098 2010 60 0 0 chr5 144298085 144298336 -58787196 - AluY SINE Alu 0 311 61 2258 221 94 44 chr5 144298336 144299007 -58786525 - L1ME1 LINE L1 -1068 5098 4462 25 31 0 0 chr5 144299083 144299115 -58786417 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 144299271 144299297 -58786235 + AT_rich Low_complexity Low_complexity 1 26 0 4786 148 24 0 chr5 144299525 144300850 -58784682 - L1PA15 LINE L1 -2 6163 4798 210 37 0 0 chr5 144300854 144300881 -58784651 + (TTA)n Simple_repeat Simple_repeat 3 29 0 20927 30 0 0 chr5 144300881 144304146 -58781386 - L1PA2 LINE L1 -18 6137 2874 2116 184 49 72 chr5 144306059 144306614 -58778918 - L1MD3 LINE L1 0 7995 7454 240 310 56 35 chr5 144307149 144307291 -58778241 + L3 LINE CR1 974 1118 -459 214 334 138 62 chr5 144307916 144308221 -58777311 + L3 LINE CR1 1216 1543 -34 2239 116 3 0 chr5 144309939 144310250 -58775282 - AluSx SINE Alu 0 312 1 1267 244 122 18 chr5 144311298 144311458 -58774074 - MER110 LTR ERV1 0 491 349 2181 112 29 15 chr5 144311458 144311798 -58773734 - L1PA16 LINE L1 -3 6163 5819 1267 244 122 18 chr5 144311798 144311815 -58773717 - MER110 LTR ERV1 -142 349 335 551 218 36 0 chr5 144311815 144311925 -58773607 + MER81 DNA DNA 1 114 0 1267 244 122 18 chr5 144311925 144312189 -58773343 - MER110 LTR ERV1 -156 335 3 319 289 13 22 chr5 144312561 144312706 -58772826 - MIR SINE MIR -66 142 20 7385 169 146 16 chr5 144313573 144315126 -58770406 - MER52A LTR ERV1 0 1755 1 351 321 36 9 chr5 144315441 144315553 -58769979 - L2 LINE L2 0 3272 3158 238 284 53 77 chr5 144315813 144315982 -58769550 - L2 LINE L2 -2782 532 368 1566 224 3 37 chr5 144316705 144316864 -58768668 + MLT1A1 LTR MaLR 1 164 -201 2219 104 3 0 chr5 144316864 144317171 -58768361 + AluSg SINE Alu 1 308 -2 1566 224 3 37 chr5 144317171 144317386 -58768146 + MLT1A1 LTR MaLR 164 362 -3 256 273 46 150 chr5 144317545 144317805 -58767727 + MIR SINE MIR 9 241 -21 287 296 105 23 chr5 144317993 144318130 -58767402 - MIR3 SINE MIR -37 171 46 693 253 143 54 chr5 144318540 144318947 -58766585 + MLT1H LTR MaLR 81 523 -26 1161 101 0 0 chr5 144319034 144319202 -58766330 + L1MA3 LINE L1 6137 6304 -1 232 340 128 34 chr5 144319707 144319942 -58765590 + L2 LINE L2 2692 2948 -366 476 285 7 7 chr5 144319945 144320089 -58765443 + MER69A DNA AcHobo 1 144 -33 977 208 132 19 chr5 144321450 144321767 -58763765 - MER114 LTR ERV 0 648 283 2786 117 9 7 chr5 144321767 144322210 -58763322 + L1PA13 LINE L1 5720 6163 0 977 208 132 19 chr5 144322210 144322257 -58763275 - MER114 LTR ERV -365 283 243 373 159 29 0 chr5 144322313 144322382 -58763150 - MER94 DNA DNA -63 71 1 200 372 51 0 chr5 144322444 144322522 -58763010 - L2 LINE L2 -44 3228 3147 2607 161 13 51 chr5 144322715 144323249 -58762283 - MER67D LTR ERV1 0 514 1 365 299 114 6 chr5 144323982 144324149 -58761383 + MIR SINE MIR 77 261 -1 447 305 48 31 chr5 144324682 144324908 -58760624 - MIR SINE MIR 0 262 20 870 266 22 9 chr5 144325193 144325422 -58760110 + MIR SINE MIR 30 261 -1 36 40 0 0 chr5 144325426 144325476 -58760056 + AT_rich Low_complexity Low_complexity 1 50 0 216 67 0 0 chr5 144325713 144325743 -58759789 + (TG)n Simple_repeat Simple_repeat 1 30 0 2459 58 3 0 chr5 144327416 144327726 -58757806 + AluY SINE Alu 1 311 0 2384 73 0 0 chr5 144327744 144328044 -58757488 + AluY SINE Alu 1 300 -11 4690 162 52 32 chr5 144328341 144329016 -58756516 + L1MA7 LINE L1 4619 5280 -1011 1825 181 88 8 chr5 144329016 144329415 -58756117 + MSTB1 LTR MaLR 1 431 -1 4690 162 52 32 chr5 144329415 144329883 -58755649 + L1MA7 LINE L1 5280 5738 -553 297 89 0 0 chr5 144329883 144329928 -58755604 + (CA)n Simple_repeat Simple_repeat 2 46 0 4690 162 52 32 chr5 144329928 144330409 -58755123 + L1MA7 LINE L1 5738 6282 -9 235 269 75 0 chr5 144330628 144330695 -58754837 + MIR SINE MIR 105 176 -86 1462 107 5 14 chr5 144330971 144331187 -58754345 - AluSp SINE Alu -99 214 1 2337 114 25 8 chr5 144331405 144331763 -58753769 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr5 144332648 144332669 -58752863 + AT_rich Low_complexity Low_complexity 1 21 0 685 309 55 62 chr5 144335181 144335912 -58749620 - L2 LINE L2 -20 3293 2559 349 265 23 15 chr5 144335912 144336044 -58749488 - L2 LINE L2 -858 2456 2324 24 32 0 0 chr5 144336159 144336190 -58749342 + AT_rich Low_complexity Low_complexity 1 31 0 2359 292 46 17 chr5 144336529 144338094 -58747438 + ERVL LTR ERVL 1520 3235 -2419 574 307 34 8 chr5 144338236 144338503 -58747029 - L1M4 LINE L1 -2317 3829 3556 21 0 0 0 chr5 144338550 144338571 -58746961 + AT_rich Low_complexity Low_complexity 1 21 0 585 218 44 23 chr5 144338600 144338910 -58746622 + MER63 DNA MER1_type 49 428 -633 1662 183 48 60 chr5 144338936 144339160 -58746372 + MER63 DNA MER1_type 666 884 -177 2253 85 3 0 chr5 144339160 144339454 -58746078 + AluY SINE Alu 1 295 -16 1662 183 48 60 chr5 144339454 144339628 -58745904 + MER63 DNA MER1_type 884 1059 -2 848 249 66 125 chr5 144339633 144340476 -58745056 - L1M4 LINE L1 -2598 3548 2755 311 263 91 63 chr5 144340834 144341009 -58744523 - L1M4 LINE L1 -3829 2317 2138 922 225 13 89 chr5 144341045 144341361 -58744171 - L1MEc LINE L1 -2095 4120 3829 1152 236 152 91 chr5 144341363 144341976 -58743556 - MLT1E1 LTR MaLR 0 654 5 5603 103 57 6 chr5 144342020 144342941 -58742591 + L1PA14 LINE L1 5188 6153 -8 1738 168 45 8 chr5 144342941 144343280 -58742252 + L1MA6 LINE L1 5930 6300 0 3213 136 22 6 chr5 144343293 144343839 -58741693 + L1PB4 LINE L1 5593 6147 -9 545 224 57 52 chr5 144343875 144344085 -58741447 - L1MEc LINE L1 -2441 3774 3564 * 7391 33 1 0 chr5 144344078 144344963 -58740569 - L1PA4 LINE L1 -3 6152 5267 * 11340 31 4 0 chr5 144344959 144346354 -58739178 + L1P LINE L1 2675 4075 -2071 3890 252 60 30 chr5 144346352 144348782 -58736750 - L1MEc LINE L1 -2636 3579 1099 * 2157 110 16 16 chr5 144348782 144349092 -58736440 - AluSg SINE Alu 0 310 1 3890 252 60 30 chr5 144349092 144349444 -58736088 - L1MEc LINE L1 -5116 1099 759 631 257 44 22 chr5 144349503 144349729 -58735803 - L1MEc LINE L1 -5881 515 285 1092 234 83 26 chr5 144349758 144350109 -58735423 - LTR25 LTR ERV1 -9 785 415 229 238 143 0 chr5 144350080 144350143 -58735389 - MER51A LTR ERV1 -354 280 209 * 226 246 0 15 chr5 144350136 144350201 -58735331 - LTR28 LTR ERV1 -796 224 161 * 508 131 12 0 chr5 144350336 144350420 -58735112 - MER61E LTR ERV1 -484 85 1 452 316 124 0 chr5 144350432 144350609 -58734923 - L1MEc LINE L1 -6162 234 36 709 287 84 75 chr5 144350611 144351312 -58734220 - L1MEd LINE L1 -4862 1267 576 203 147 0 0 chr5 144352118 144352152 -58733380 + (TG)n Simple_repeat Simple_repeat 1 34 0 1461 145 8 0 chr5 144352644 144352878 -58732654 + L1PB4 LINE L1 5816 6051 -105 36 40 0 0 chr5 144353283 144353333 -58732199 + AT_rich Low_complexity Low_complexity 1 50 0 5019 60 18 15 chr5 144353714 144354379 -58731153 + PABL_B LTR ERV1 1 667 0 21 57 0 0 chr5 144355038 144355073 -58730459 + AT_rich Low_complexity Low_complexity 1 35 0 325 296 21 42 chr5 144355148 144355290 -58730242 - L2 LINE L2 -16 3297 3159 264 293 0 0 chr5 144355389 144355447 -58730085 + MER94 DNA DNA 4 61 -73 2067 132 3 0 chr5 144355465 144355753 -58729779 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr5 144355767 144355791 -58729741 + AT_rich Low_complexity Low_complexity 1 24 0 1780 196 100 0 chr5 144356122 144356623 -58728909 + MER114 LTR ERV 12 562 -86 464 289 20 7 chr5 144356654 144356824 -58728708 + L1ME2 LINE L1 5993 6164 -2 5485 118 26 9 chr5 144357145 144357697 -58727835 + L1PA15 LINE L1 5229 5804 -361 2196 113 0 26 chr5 144357697 144358007 -58727525 + AluY SINE Alu 1 302 -9 5485 118 26 9 chr5 144358007 144358370 -58727162 + L1PA15 LINE L1 5804 6159 -6 180 255 64 0 chr5 144360596 144360643 -58724889 + L2 LINE L2 3210 3259 -13 297 119 0 0 chr5 144360856 144360898 -58724634 + LOR1a LTR ERV1 213 254 -243 801 251 53 10 chr5 144361125 144361332 -58724200 + MIR SINE MIR 45 260 -2 3039 147 16 0 chr5 144361652 144362141 -58723391 + LOR1a LTR ERV1 1 497 0 494 261 64 39 chr5 144362445 144362648 -58722884 + MLT1K LTR MaLR 381 588 0 1633 91 0 4 chr5 144363244 144363475 -58722057 - L1PA13 LINE L1 -107 6056 5827 562 86 0 0 chr5 144363475 144363548 -58721984 + L1PA13 LINE L1 6066 6146 -17 487 78 0 39 chr5 144363548 144363624 -58721908 + L1PA13 LINE L1 6085 6158 -5 27 29 0 0 chr5 144364248 144364282 -58721250 + AT_rich Low_complexity Low_complexity 1 34 0 355 322 26 74 chr5 144364320 144364550 -58720982 + L1ME LINE L1 5502 5720 -401 26 0 0 0 chr5 144364552 144364578 -58720954 + AT_rich Low_complexity Low_complexity 1 26 0 4923 181 47 8 chr5 144364579 144365578 -58719954 - L1MA4 LINE L1 -9 6291 5254 2083 141 108 10 chr5 144365593 144365983 -58719549 + MSTA LTR MaLR 1 428 0 8709 150 23 47 chr5 144365985 144367517 -58718015 + MSTA-int LTR MaLR 3 1497 -83 2372 97 0 0 chr5 144367517 144367815 -58717717 + AluY SINE Alu 1 298 -13 8709 150 23 47 chr5 144367815 144367892 -58717640 + MSTA-int LTR MaLR 1497 1574 -6 2060 122 122 10 chr5 144367897 144368282 -58717250 + MSTA LTR MaLR 1 428 0 1018 205 0 0 chr5 144368282 144368482 -58717050 - L1MA4 LINE L1 -903 5243 5044 2217 117 3 3 chr5 144368976 144369283 -58716249 - AluSx SINE Alu -5 307 1 3817 175 25 22 chr5 144369305 144370030 -58715502 - MER44D DNA MER2_type 0 605 7 364 250 181 19 chr5 144370315 144370475 -58715057 - L1ME1 LINE L1 -6 6160 5975 * 1282 295 56 41 chr5 144370472 144371432 -58714100 - L1MEc LINE L1 -906 1670 640 1057 300 14 0 chr5 144371451 144371741 -58713791 - L1MEc LINE L1 -6066 330 37 235 205 0 0 chr5 144371796 144371835 -58713697 - Tigger3(Golem) DNA MER2_type 0 3029 2991 * 972 209 0 31 chr5 144371832 144372023 -58713509 - Tigger3(Golem) DNA MER2_type -2843 186 2 282 291 81 29 chr5 144372143 144372452 -58713080 + L1ME3 LINE L1 4895 5219 -927 959 118 0 0 chr5 144372638 144372988 -58712544 + AluSc SINE Alu 1 350 0 310 312 149 51 chr5 144373024 144373319 -58712213 + L1ME3 LINE L1 5566 5889 -273 279 227 0 113 chr5 144373737 144373834 -58711698 + MLT1K LTR MaLR 493 578 -10 1063 217 77 88 chr5 144374415 144374881 -58710651 - MLT2C2 LTR ERVL -3 461 1 24 85 0 0 chr5 144374942 144375001 -58710531 + AT_rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr5 144375054 144375076 -58710456 + AT_rich Low_complexity Low_complexity 1 22 0 1380 210 91 0 chr5 144375237 144375623 -58709909 + MER114 LTR ERV 89 509 -139 562 215 24 65 chr5 144375645 144375840 -58709692 - L1ME3A LINE L1 -9 6161 5972 303 28 0 0 chr5 144375934 144375970 -58709562 + (TG)n Simple_repeat Simple_repeat 2 37 0 403 335 58 11 chr5 144377236 144377424 -58708108 + L3 LINE CR1 230 426 -1151 190 333 0 0 chr5 144377504 144377561 -58707971 + MIR SINE MIR 191 247 -15 229 326 121 48 chr5 144377768 144378139 -58707393 + L3 LINE CR1 600 997 -580 1131 201 52 20 chr5 144378246 144378495 -58707037 - AluJo SINE Alu -53 259 3 217 302 47 47 chr5 144378506 144378612 -58706920 + L3 LINE CR1 1377 1482 -95 230 337 0 35 chr5 144378637 144378723 -58706809 - MER5A DNA MER1_type -26 163 81 922 330 53 34 chr5 144378801 144379423 -58706109 - L2 LINE L2 -186 3086 2462 1023 313 130 30 chr5 144379428 144380341 -58705191 - L2 LINE L2 -5 3308 2304 48 18 0 0 chr5 144380724 144380779 -58704753 + AT_rich Low_complexity Low_complexity 1 55 0 8892 213 46 38 chr5 144380779 144381465 -58704067 - L1M4 LINE L1 -717 6272 5593 1615 157 22 0 chr5 144381465 144381640 -58703892 - AluSx SINE Alu 0 312 127 207 0 0 0 chr5 144381640 144381663 -58703869 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1615 157 22 0 chr5 144381663 144381761 -58703771 - AluSx SINE Alu -185 127 33 8892 213 46 38 chr5 144381761 144381891 -58703641 - L1M4 LINE L1 -1396 5593 5466 1976 98 79 0 chr5 144381891 144382168 -58703364 - AluSc SINE Alu -10 299 1 8892 213 46 38 chr5 144382168 144383891 -58701641 - L1M4 LINE L1 -1523 5466 3709 5273 148 24 3 chr5 144383891 144385020 -58700512 - L1PA16 LINE L1 -9 6157 5017 8892 213 46 38 chr5 144385020 144385278 -58700254 - L1M4 LINE L1 -3280 3709 3455 512 172 0 0 chr5 144385295 144385388 -58700144 - L1MA5A LINE L1 -12 6285 6193 2174 297 94 23 chr5 144385416 144386247 -58699285 - L1M4 LINE L1 -5962 897 8 198 156 0 0 chr5 144386371 144386416 -58699116 + A-rich Low_complexity Low_complexity 1 45 0 2318 71 0 14 chr5 144386472 144386769 -58698763 + AluY SINE Alu 1 293 -18 428 309 138 33 chr5 144387188 144387369 -58698163 + MIR3 SINE MIR 5 204 -4 23 33 0 0 chr5 144388613 144388643 -58696889 + AT_rich Low_complexity Low_complexity 1 30 0 5612 240 44 42 chr5 144388877 144389613 -58695919 - L1M4 LINE L1 -1698 4448 3715 2129 121 0 0 chr5 144389613 144389911 -58695621 - AluSx SINE Alu -14 298 1 5612 240 44 42 chr5 144389911 144391179 -58694353 - L1M4 LINE L1 -2431 3715 2441 427 255 100 0 chr5 144392693 144392896 -58692636 + ERVL LTR ERVL 2083 2352 -3210 513 295 53 36 chr5 144392980 144393261 -58692271 + ERVL LTR ERVL 2616 2901 -2863 378 326 61 41 chr5 144393333 144393692 -58691840 + ERVL LTR ERVL 2967 3334 -2151 1569 163 54 128 chr5 144393906 144393965 -58691567 - MER54A LTR ERVL 0 901 839 1442 155 0 0 chr5 144393965 144394204 -58691328 + L1MA3 LINE L1 6067 6305 0 1569 163 54 128 chr5 144394204 144394549 -58690983 - MER54A LTR ERVL -62 839 527 490 122 0 0 chr5 144394556 144394630 -58690902 + MADE1 DNA Mariner 6 79 -1 6320 83 32 1 chr5 144394758 144395650 -58689882 + L1PA11 LINE L1 5255 6174 0 27 29 0 0 chr5 144396547 144396581 -58688951 + AT_rich Low_complexity Low_complexity 1 34 0 23 54 0 0 chr5 144396957 144396994 -58688538 + AT_rich Low_complexity Low_complexity 1 37 0 34 42 0 0 chr5 144397502 144397550 -58687982 + AT_rich Low_complexity Low_complexity 1 48 0 448 282 102 50 chr5 144397771 144398330 -58687202 - L1MC4a LINE L1 -732 5438 5266 1816 162 9 125 chr5 144398424 144398855 -58686677 - MLT1B LTR MaLR -9 381 1 2241 191 26 12 chr5 144398856 144399275 -58686257 - MLT1B-int LTR MaLR -1 1370 946 233 302 12 0 chr5 144399394 144399480 -58686052 - MLT1B-int LTR MaLR -963 772 686 2981 189 42 19 chr5 144399540 144400263 -58685269 - MLT1-int LTR MaLR -484 887 29 570 214 43 0 chr5 144400291 144400408 -58685124 - FLAM_C SINE Alu -19 124 3 954 304 50 20 chr5 144400475 144400877 -58684655 - L2 LINE L2 -43 3270 2857 361 286 113 24 chr5 144400948 144401196 -58684336 - L1M4 LINE L1 -3673 2473 2204 844 159 0 29 chr5 144401233 144401371 -58684161 - AluJb SINE Alu -27 285 152 2333 58 0 32 chr5 144401457 144401766 -58683766 + AluY SINE Alu 1 299 -12 22 0 0 0 chr5 144402049 144402071 -58683461 + AT_rich Low_complexity Low_complexity 1 22 0 2792 166 59 19 chr5 144402307 144402898 -58682634 - L1MA7 LINE L1 -2 6289 5675 2139 123 3 0 chr5 144403359 144403659 -58681873 - AluSx SINE Alu -11 301 1 1603 250 174 46 chr5 144404625 144405213 -58680319 + MLT2F LTR ERVL 1 663 0 668 316 69 8 chr5 144405660 144406007 -58679525 + HAL1 LINE L1 1526 1917 -590 405 296 76 15 chr5 144406318 144406450 -58679082 + LTR67 LTR ERVL 87 226 -331 302 351 81 17 chr5 144407395 144407569 -58677963 + L1MCc LINE L1 313 497 -5926 2017 113 6 57 chr5 144407639 144407957 -58677575 + AluSq SINE Alu 1 302 -11 720 295 29 34 chr5 144407961 144408463 -58677069 + L1MCc LINE L1 649 1173 -5250 * 1193 274 38 52 chr5 144408443 144409155 -58676377 + L1MCc LINE L1 1934 2635 -4487 1227 122 55 74 chr5 144409161 144409432 -58676100 - THE1C LTR MaLR -6 369 104 357 24 0 0 chr5 144409477 144409519 -58676013 + (TG)n Simple_repeat Simple_repeat 1 42 0 2049 187 51 68 chr5 144409520 144409991 -58675541 - MLT2B3 LTR ERVL -20 534 72 365 182 0 0 chr5 144410085 144410151 -58675381 - MLT2B3 LTR ERVL -486 68 3 1682 148 90 29 chr5 144410407 144410585 -58674947 + MLT1A1 LTR MaLR 1 167 -198 2242 139 34 14 chr5 144410585 144411024 -58674508 + LTR7 LTR ERV1 3 450 0 1682 148 90 29 chr5 144411024 144411189 -58674343 + MLT1A1 LTR MaLR 167 365 0 239 173 19 0 chr5 144411683 144411735 -58673797 + CT-rich Low_complexity Low_complexity 5 57 0 374 281 54 48 chr5 144412180 144412347 -58673185 - MIR SINE MIR -14 248 81 530 241 46 46 chr5 144412552 144412726 -58672806 + MLT1K LTR MaLR 392 565 -23 2107 97 7 0 chr5 144413712 144413991 -58671541 - AluSq SINE Alu -32 281 1 38 22 0 0 chr5 144414466 144414511 -58671021 + AT_rich Low_complexity Low_complexity 1 45 0 195 257 14 155 chr5 144414545 144414693 -58670839 - L2 LINE L2 -3 3269 3143 217 145 145 32 chr5 144414863 144414925 -58670607 + L2 LINE L2 2985 3053 -219 327 281 165 6 chr5 144415406 144415570 -58669962 - L3 LINE CR1 -70 1507 1318 306 0 0 0 chr5 144416512 144416546 -58668986 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2163 104 3 3 chr5 144416546 144416832 -58668700 - AluSc SINE Alu -20 289 1 21 0 0 0 chr5 144417523 144417544 -58667988 + AT_rich Low_complexity Low_complexity 1 21 0 714 350 123 42 chr5 144418658 144419642 -58665890 - L2 LINE L2 0 3313 2203 2385 100 6 6 chr5 144419771 144420120 -58665412 + L1PA12 LINE L1 5819 6167 -1 23 0 0 0 chr5 144420688 144420711 -58664821 + AT_rich Low_complexity Low_complexity 1 23 0 280 405 13 0 chr5 144421033 144421186 -58664346 - MER115 DNA AcHobo -376 317 163 793 139 49 7 chr5 144422242 144422386 -58663146 + MER4D LTR ERV1 1 150 -722 191 300 67 67 chr5 144422841 144423111 -58662421 - L2 LINE L2 -1247 2067 1798 360 86 69 0 chr5 144423184 144423242 -58662290 - U7 snRNA snRNA 0 63 2 23 97 0 0 chr5 144423269 144423341 -58662191 + AT_rich Low_complexity Low_complexity 1 72 0 2014 112 0 27 chr5 144423346 144423641 -58661891 + AluSx SINE Alu 1 287 -25 288 0 0 0 chr5 144425461 144425493 -58660039 + (TG)n Simple_repeat Simple_repeat 2 33 0 2233 88 0 10 chr5 144425528 144425824 -58659708 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr5 144426276 144426299 -58659233 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr5 144427518 144427568 -58657964 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5 144427655 144427678 -58657854 + AT_rich Low_complexity Low_complexity 1 23 0 28 48 0 0 chr5 144427879 144427921 -58657611 + AT_rich Low_complexity Low_complexity 1 42 0 17050 101 6 0 chr5 144428257 144431563 -58653969 + L1PA7 LINE L1 2838 6154 0 918 252 28 0 chr5 144432511 144432725 -58652807 + MER58A DNA MER1_type 5 224 0 27 29 0 0 chr5 144433230 144433264 -58652268 + AT_rich Low_complexity Low_complexity 1 34 0 2380 123 11 16 chr5 144433852 144434218 -58651314 + THE1B LTR MaLR 1 364 0 10188 119 33 6 chr5 144434218 144435756 -58649776 + THE1B-int LTR MaLR 1 1580 0 2510 115 6 6 chr5 144435756 144436120 -58649412 + THE1B LTR MaLR 1 364 0 442 291 81 32 chr5 144436967 144437314 -58648218 + L1 LINE L1 3893 4256 -1890 316 224 50 84 chr5 144437317 144437496 -58648036 + L1 LINE L1 4300 4472 -1674 250 304 95 60 chr5 144437519 144438138 -58647394 + L1ME LINE L1 4501 5141 -1005 1106 86 8 3 chr5 144438309 144438547 -58646985 + AluSx SINE Alu 4 308 0 616 277 49 65 chr5 144438559 144438693 -58646839 + L1ME LINE L1 5345 5480 -682 1958 84 3 57 chr5 144438693 144438990 -58646542 + AluSp SINE Alu 22 302 -11 616 277 49 65 chr5 144438990 144439162 -58646370 + L1ME LINE L1 5480 5646 -516 28 29 0 0 chr5 144439307 144439342 -58646190 + AT_rich Low_complexity Low_complexity 1 35 0 1840 162 28 12 chr5 144439613 144439940 -58645592 + MER1B DNA MER1_type 8 339 0 23 0 0 0 chr5 144440153 144440176 -58645356 + AT_rich Low_complexity Low_complexity 1 23 0 191 244 0 0 chr5 144440222 144440263 -58645269 + L2 LINE L2 3263 3303 -10 535 319 95 4 chr5 144440296 144440528 -58645004 + MIR SINE MIR 10 262 0 324 0 0 0 chr5 144440559 144440595 -58644937 + (GA)n Simple_repeat Simple_repeat 2 37 0 1960 256 9 20 chr5 144441481 144442017 -58643515 - L1ME2 LINE L1 -22 6142 5613 1071 75 0 0 chr5 144442033 144442166 -58643366 + AluSg/x SINE Alu 159 291 -18 758 213 85 32 chr5 144442171 144442494 -58643038 - L1ME2 LINE L1 -594 5576 5240 1497 241 67 105 chr5 144442517 144442949 -58642583 - L1ME1 LINE L1 -5 6161 5714 453 62 46 0 chr5 144442949 144443014 -58642518 - AluY SINE Alu -114 197 130 11611 166 9 2 chr5 144443014 144445877 -58639655 - L1PA13 LINE L1 0 6163 3247 1497 241 67 105 chr5 144445877 144446141 -58639391 - L1ME1 LINE L1 -450 5716 5429 952 271 90 8 chr5 144446154 144446553 -58638979 + L1M4 LINE L1 1252 1683 -4701 198 354 15 0 chr5 144446564 144446629 -58638903 - MIR SINE MIR -177 85 20 277 280 112 0 chr5 144447942 144448049 -58637483 - L2 LINE L2 0 3313 3195 1963 201 90 21 chr5 144450057 144450525 -58635007 - MLT1D LTR MaLR -5 500 1 329 335 146 44 chr5 144451334 144451492 -58634040 + MER5A DNA MER1_type 10 183 -6 361 280 250 12 chr5 144452671 144452839 -58632693 - MIR SINE MIR -17 245 38 2160 254 29 49 chr5 144452892 144453185 -58632347 - L1M4 LINE L1 -5695 847 550 189 0 0 0 chr5 144453185 144453206 -58632326 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2160 254 29 49 chr5 144453206 144453600 -58631932 - L1M4 LINE L1 -5992 550 174 342 98 0 0 chr5 144454011 144454062 -58631470 + (TA)n Simple_repeat Simple_repeat 2 52 0 553 308 31 54 chr5 144454165 144454425 -58631107 + MIR SINE MIR 3 256 -6 771 243 27 27 chr5 144454492 144454714 -58630818 + MER58A DNA MER1_type 2 223 -1 308 322 85 17 chr5 144455219 144455396 -58630136 + L1M4 LINE L1 3965 4153 -2229 13823 110 23 17 chr5 144455398 144458307 -58627225 + L1PA8A LINE L1 3208 6131 0 342 0 0 0 chr5 144458585 144458623 -58626909 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 146 0 0 chr5 144458626 144458667 -58626865 + (TA)n Simple_repeat Simple_repeat 2 42 0 236 348 0 0 chr5 144459162 144459251 -58626281 + L2 LINE L2 361 449 -2865 270 348 11 0 chr5 144460421 144460599 -58624933 + (TA)n Simple_repeat Simple_repeat 1 180 0 238 268 55 73 chr5 144460611 144460775 -58624757 - L1ME3A LINE L1 -28 6142 5982 284 250 0 0 chr5 144461990 144462050 -58623482 - LTR65 LTR ERV1 -266 403 344 3455 261 50 46 chr5 144462225 144463337 -58622195 + Charlie6 DNA MER1_type 104 1219 -2281 1450 194 91 3 chr5 144463345 144463654 -58621878 - MER2 DNA MER2_type -9 336 1 * 2383 234 29 15 chr5 144463654 144464247 -58621285 + Charlie6 DNA MER1_type 1218 1818 -1682 5651 245 40 22 chr5 144464253 144464721 -58620811 + L1MC1 LINE L1 2572 3030 -3116 2244 114 0 0 chr5 144464721 144465019 -58620513 + AluSx SINE Alu 1 298 -14 5651 245 40 22 chr5 144465019 144465864 -58619668 + L1MC1 LINE L1 3030 3929 -2217 1994 103 7 0 chr5 144465864 144466173 -58619359 + AluY SINE Alu 6 316 0 5651 245 40 22 chr5 144466173 144466631 -58618901 + L1MC1 LINE L1 3929 4377 -1769 1885 222 50 24 chr5 144466638 144467174 -58618358 + L1MC1 LINE L1 4457 5006 -1140 3675 144 7 7 chr5 144467175 144467786 -58617746 + L1MC1 LINE L1 5708 6318 -15 4183 194 72 35 chr5 144467790 144468942 -58616590 + Charlie6 DNA MER1_type 1806 3000 -500 4547 258 89 22 chr5 144468947 144470502 -58615030 + L1M4 LINE L1 2477 3927 -2219 2138 91 7 0 chr5 144470502 144470799 -58614733 - AluY SINE Alu -12 299 1 2115 116 0 3 chr5 144470801 144471102 -58614430 - AluSg SINE Alu -10 300 1 4547 258 89 22 chr5 144471102 144471381 -58614151 + L1M4 LINE L1 3927 4436 -1710 5357 28 0 0 chr5 144471451 144472069 -58613463 - L1PA3 LINE L1 -21 6134 5517 478 97 0 0 chr5 144472069 144472131 -58613401 + MER11D LTR ERVK 836 897 0 232 200 0 17 chr5 144472131 144472191 -58613341 + L1M4 LINE L1 4706 4764 -1382 932 244 16 39 chr5 144472199 144472507 -58613025 + L1M4 LINE L1 5101 5401 -745 632 92 0 0 chr5 144472513 144472600 -58612932 + MSTB LTR MaLR 1 87 -339 5154 163 26 6 chr5 144473374 144474711 -58610821 - L1M1 LINE L1 -620 7101 5740 * 6725 181 7 7 chr5 144474703 144475839 -58609693 - L1PA15-16 LINE L1 -5713 1136 1 3055 148 88 21 chr5 144475849 144476500 -58609032 - L1M1 LINE L1 -4070 3495 2802 21 71 0 0 chr5 144476747 144476789 -58608743 + AT_rich Low_complexity Low_complexity 1 42 0 440 252 30 15 chr5 144476917 144477052 -58608480 - L1MEc LINE L1 -4725 1838 1702 245 282 0 0 chr5 144477202 144477273 -58608259 - L1MEc LINE L1 -5052 1332 1262 1605 192 60 50 chr5 144477306 144477786 -58607746 + MER31A LTR ERV1 1 485 0 269 198 66 91 chr5 144477786 144477907 -58607625 - L1MEc LINE L1 -5589 783 666 21 0 0 0 chr5 144478177 144478198 -58607334 + AT_rich Low_complexity Low_complexity 1 21 0 703 247 50 0 chr5 144478499 144478681 -58606851 + MIR SINE MIR 72 262 0 318 350 67 38 chr5 144478957 144479197 -58606335 - L3 LINE CR1 -54 1523 1277 226 274 0 62 chr5 144479302 144479415 -58606117 + CT-rich Low_complexity Low_complexity 6 111 0 2453 84 0 0 chr5 144479448 144479758 -58605774 + AluY SINE Alu 1 310 -1 338 314 125 68 chr5 144479764 144480334 -58605198 - L3 LINE CR1 -324 1253 652 227 347 129 10 chr5 144480436 144480629 -58604903 - L3 LINE CR1 -1113 464 249 293 282 69 15 chr5 144482372 144482503 -58603029 - L2 LINE L2 -61 3252 3115 25 0 0 0 chr5 144482586 144482611 -58602921 + AT_rich Low_complexity Low_complexity 1 25 0 7667 104 6 21 chr5 144482661 144484604 -58600928 + L1PA8 LINE L1 4241 6172 0 2357 94 3 0 chr5 144484614 144484961 -58600571 + AluSp SINE Alu 1 348 0 1063 93 7 0 chr5 144485546 144485686 -58599846 + AluSc SINE Alu 1 141 -168 2219 78 0 3 chr5 144485688 144485994 -58599538 + AluSc SINE Alu 1 305 0 1752 150 26 57 chr5 144486531 144486918 -58598614 + THE1C LTR MaLR 1 375 0 2539 92 17 0 chr5 144487633 144487982 -58597550 - THE1A LTR MaLR 0 355 1 11344 108 5 0 chr5 144487982 144489554 -58595978 - THE1A-int LTR MaLR 0 1580 1 2530 95 9 0 chr5 144489554 144489901 -58595631 - THE1A LTR MaLR 0 355 6 2402 111 17 19 chr5 144490136 144490497 -58595035 - THE1B LTR MaLR -4 360 1 1442 228 99 6 chr5 144490653 144490995 -58594537 + MLT1A2 LTR MaLR 1 374 0 1363 287 90 42 chr5 144491635 144493149 -58592383 - L1ME3A LINE L1 -75 6095 4514 2106 122 59 31 chr5 144495269 144495623 -58589909 + THE1B LTR MaLR 1 364 0 9819 84 4 162 chr5 144495623 144497498 -58588034 + THE1B-int LTR MaLR 1 1579 -1 2063 142 47 36 chr5 144497498 144497858 -58587674 + THE1B LTR MaLR 1 364 0 5375 137 18 11 chr5 144499239 144500438 -58585094 + L1PA16 LINE L1 4941 6157 -9 199 162 68 7 chr5 144500472 144500620 -58584912 + (TA)n Simple_repeat Simple_repeat 1 157 0 2123 101 7 7 chr5 144500671 144500958 -58584574 + AluSc SINE Alu 3 289 -20 208 147 0 0 chr5 144500991 144501025 -58584507 + (A)n Simple_repeat Simple_repeat 1 34 0 256 269 39 19 chr5 144501353 144501457 -58584075 - L1MC4a LINE L1 -1889 5919 5814 381 299 7 14 chr5 144501719 144501788 -58583744 - L1ME3A LINE L1 -5 6165 6097 1616 100 32 4 chr5 144501788 144502038 -58583494 - L1PA13 LINE L1 -5 6158 5902 381 299 7 14 chr5 144502038 144502115 -58583417 - L1ME3A LINE L1 -73 6097 6020 392 0 21 0 chr5 144502334 144502382 -58583150 + (GA)n Simple_repeat Simple_repeat 2 50 0 276 288 38 0 chr5 144502648 144502728 -58582804 + MIR3 SINE MIR 125 207 -1 252 100 0 0 chr5 144503082 144503122 -58582410 + (GA)n Simple_repeat Simple_repeat 1 40 0 1257 206 99 7 chr5 144503333 144503625 -58581907 + L1M3e LINE L1 3 321 -6709 3144 228 74 44 chr5 144503634 144505488 -58580044 + L1M3e LINE L1 865 2747 -4360 * 5478 162 23 6 chr5 144505481 144506738 -58578794 + L1MA9 LINE L1 5031 6306 -6 2025 98 0 0 chr5 144507003 144507257 -58578275 - AluSg SINE Alu -26 284 31 1617 110 0 0 chr5 144507257 144507475 -58578057 - AluSg SINE Alu -92 218 1 457 118 109 0 chr5 144507541 144507651 -58577881 - MER69 DNA AcHobo -97 2429 2308 1491 152 53 11 chr5 144507690 144507973 -58577559 - L1MC1 LINE L1 0 6333 6039 12573 220 25 22 chr5 144507985 144512832 -58572700 - L1PB2 LINE L1 -2 6865 2037 2019 180 107 9 chr5 144512832 144513292 -58572240 - LTR22 LTR ERVK -4 505 1 12573 220 25 22 chr5 144513292 144513407 -58572125 - L1PB2 LINE L1 -4830 2037 1924 2406 93 0 0 chr5 144513407 144513709 -58571823 + AluY SINE Alu 1 302 -9 12573 220 25 22 chr5 144513709 144513912 -58571620 - L1PB2 LINE L1 -4943 1924 1723 194 0 39 0 chr5 144513912 144513938 -58571594 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2297 88 0 0 chr5 144513941 144514226 -58571306 - AluY SINE Alu -26 285 1 12573 220 25 22 chr5 144514226 144516289 -58569243 - L1PB2 LINE L1 -5145 1722 463 1243 254 25 0 chr5 144516323 144516646 -58568886 - L1PB2 LINE L1 -6530 333 3 2675 146 33 4 chr5 144516665 144517117 -58568415 - L1MC1 LINE L1 -288 6045 5581 261 156 0 0 chr5 144517388 144517433 -58568099 + L1ME1 LINE L1 5539 5583 -583 1842 226 38 43 chr5 144517434 144517942 -58567590 + L1ME1 LINE L1 5644 6291 -21 270 282 55 45 chr5 144518483 144518593 -58566939 + MIR SINE MIR 58 168 -94 2540 72 0 0 chr5 144519528 144519835 -58565697 + AluY SINE Alu 1 307 -4 277 362 22 7 chr5 144520626 144520764 -58564768 + MIR SINE MIR 58 197 -65 186 43 0 0 chr5 144521041 144521064 -58564468 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2203 190 38 18 chr5 144521208 144521707 -58563825 - L1MA9 LINE L1 -97 6215 5707 302 261 87 53 chr5 144521813 144522020 -58563512 + L1M4 LINE L1 2497 2710 -3436 2048 114 24 0 chr5 144522049 144522339 -58563193 + AluSg SINE Alu 1 297 -13 690 279 105 51 chr5 144522545 144522860 -58562672 - L2 LINE L2 -16 3297 2966 350 335 71 7 chr5 144523646 144523801 -58561731 + MIR SINE MIR 18 182 -80 17088 170 56 31 chr5 144523801 144527238 -58558294 + L1MA2 LINE L1 19 3369 -4354 2134 118 7 0 chr5 144527238 144527534 -58557998 + AluSx SINE Alu 1 298 -14 17088 170 56 31 chr5 144527534 144528079 -58557453 + L1MA2 LINE L1 3369 3899 -3824 444 37 0 0 chr5 144528079 144528133 -58557399 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 1526 194 11 28 chr5 144528138 144528422 -58557110 - AluJb SINE Alu -31 281 3 17088 170 56 31 chr5 144528422 144529230 -58556302 + L1MA2 LINE L1 3902 4689 -3034 2133 113 0 32 chr5 144529230 144529539 -58555993 + AluSg SINE Alu 1 299 -11 17088 170 56 31 chr5 144529539 144532249 -58553283 + L1MA2 LINE L1 4689 7723 0 1618 212 194 24 chr5 144532384 144532421 -58553111 - MLT2B1 LTR ERVL 0 440 411 300 27 0 0 chr5 144532421 144532458 -58553074 + (TG)n Simple_repeat Simple_repeat 2 38 0 1618 212 194 24 chr5 144532458 144532869 -58552663 - MLT2B1 LTR ERVL -29 411 3 29 28 0 0 chr5 144533401 144533437 -58552095 + AT_rich Low_complexity Low_complexity 1 36 0 187 296 23 0 chr5 144533619 144533663 -58551869 + L2 LINE L2 3210 3254 -18 1621 237 15 78 chr5 144533882 144534481 -58551051 + L1MC4a LINE L1 6031 6591 -1217 209 296 139 26 chr5 144535196 144535311 -58550221 + L2 LINE L2 3184 3311 -2 2536 70 0 3 chr5 144535604 144535916 -58549616 + AluY SINE Alu 1 311 0 1672 215 84 23 chr5 144536069 144536543 -58548989 - MLT1D LTR MaLR 0 505 3 351 0 0 0 chr5 144537240 144537279 -58548253 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2774 41 0 9 chr5 144537279 144537620 -58547912 - L1PA7 LINE L1 -11 6143 5806 619 187 0 0 chr5 144539404 144539511 -58546021 - AluSg/x SINE Alu -22 290 184 323 267 24 33 chr5 144540431 144540629 -58544903 + L1MEd LINE L1 869 1066 -5053 2404 74 0 3 chr5 144540629 144540926 -58544606 + AluY SINE Alu 1 296 -15 323 267 24 33 chr5 144540926 144540937 -58544595 + L1MEd LINE L1 1066 1076 -5043 309 264 129 34 chr5 144541032 144541161 -58544371 + L1M4 LINE L1 5624 5776 -402 1046 226 128 10 chr5 144541161 144541467 -58544065 - MER2 DNA MER2_type -2 342 1 309 264 129 34 chr5 144541467 144541515 -58544017 + L1M4 LINE L1 5776 5818 -360 10830 177 51 13 chr5 144542583 144545710 -58539822 - L1MA8 LINE L1 -1 6290 3040 493 282 61 2 chr5 144546411 144546565 -58538967 - MIR SINE MIR -65 143 32 379 333 34 39 chr5 144546622 144546829 -58538703 + MIR SINE MIR 44 249 -13 287 167 0 0 chr5 144547487 144547535 -58537997 - MLT1J LTR MaLR -11 500 453 200 402 11 0 chr5 144547780 144547872 -58537660 - L2 LINE L2 -690 2624 2532 509 361 79 4 chr5 144548396 144548637 -58536895 - MIR SINE MIR 0 262 4 1094 72 52 0 chr5 144549061 144549214 -58536318 - L1P LINE L1 -1751 4395 4235 6462 60 1 1 chr5 144549214 144550028 -58535504 + L1PA7 LINE L1 5336 6150 -4 1419 141 39 0 chr5 144550350 144550584 -58534948 + L1PA16 LINE L1 5914 6156 -10 25 0 0 0 chr5 144550877 144550902 -58534630 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr5 144551138 144551165 -58534367 + AT_rich Low_complexity Low_complexity 1 27 0 13496 237 29 18 chr5 144551597 144554933 -58530599 - L1P4 LINE L1 -593 6275 2862 2379 79 0 7 chr5 144554933 144555236 -58530296 - AluY SINE Alu -10 301 1 13496 237 29 18 chr5 144555236 144556313 -58529219 - L1P4 LINE L1 -4006 2862 1798 435 265 98 65 chr5 144557185 144557430 -58528102 - MIR SINE MIR -6 256 4 1072 310 122 13 chr5 144557848 144558605 -58526927 - L2 LINE L2 0 3313 2452 2503 58 0 0 chr5 144559046 144559374 -58526158 - L1PA5 LINE L1 -3295 2851 2524 19233 51 2 0 chr5 144559374 144562701 -58522831 + L1PA5 LINE L1 2858 6152 -2 28 0 0 0 chr5 144563615 144563643 -58521889 + AT_rich Low_complexity Low_complexity 1 28 0 2148 73 24 17 chr5 144564558 144564845 -58520687 + AluY SINE Alu 3 291 -20 1370 292 56 31 chr5 144565098 144565546 -58519986 + LTR16B LTR ERVL 4 462 -2 181 274 95 42 chr5 144568379 144568420 -58517112 - L2 LINE L2 -236 3036 2999 2085 99 0 38 chr5 144568420 144568712 -58516820 + AluSp SINE Alu 1 281 -32 231 36 0 0 chr5 144568712 144568740 -58516792 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 181 274 95 42 chr5 144568740 144568792 -58516740 - L2 LINE L2 -272 3000 2937 4207 30 0 0 chr5 144569730 144570226 -58515306 - L1PA3 LINE L1 0 6155 5660 342 310 26 9 chr5 144570307 144570420 -58515112 - MIR SINE MIR -71 191 77 2288 290 95 24 chr5 144571306 144572380 -58513152 - L2 LINE L2 -4 3309 2166 197 326 104 57 chr5 144572891 144573084 -58512448 - MIR SINE MIR -42 220 19 446 317 148 59 chr5 144573393 144574484 -58511048 - L2 LINE L2 -16 3256 2046 2180 120 3 0 chr5 144574626 144574926 -58510606 + AluSx SINE Alu 1 301 -11 790 215 13 0 chr5 144574926 144575084 -58510448 + L1MA6 LINE L1 5887 6046 -254 897 201 4 29 chr5 144575094 144575373 -58510159 + L1MB8 LINE L1 5926 6175 -3 2404 84 0 0 chr5 144577015 144577312 -58508220 + AluY SINE Alu 1 297 -14 396 0 0 0 chr5 144577315 144577359 -58508173 + (CA)n Simple_repeat Simple_repeat 2 45 0 391 324 112 73 chr5 144577623 144578248 -58507284 - L2 LINE L2 -14 3299 2657 1447 319 41 41 chr5 144578883 144580084 -58505448 - Harlequin LTR ERV1 -138 7647 3365 361 260 24 24 chr5 144580493 144580616 -58504916 - Harlequin LTR ERV1 -1792 4857 3031 4203 323 42 44 chr5 144580830 144585227 -58500305 - Harlequin LTR ERV1 -2028 5757 954 581 344 18 3 chr5 144585418 144585700 -58499832 - Harlequin LTR ERV1 -6782 1003 718 781 324 97 15 chr5 144586679 144587071 -58498461 - L2 LINE L2 -652 2662 2239 457 311 87 5 chr5 144587075 144587281 -58498251 - L2 LINE L2 -1293 2021 1799 598 223 141 35 chr5 144587285 144587342 -58498190 - L1M4 LINE L1 -742 5436 5386 213 94 0 0 chr5 144587342 144587374 -58498158 + (TG)n Simple_repeat Simple_repeat 1 32 0 598 223 141 35 chr5 144587374 144587724 -58497808 - L1M4 LINE L1 -792 5386 4995 2548 196 2 9 chr5 144588079 144588542 -58496990 + MER66B LTR ERV1 27 486 0 21 0 0 0 chr5 144588847 144588868 -58496664 + AT_rich Low_complexity Low_complexity 1 21 0 900 209 12 39 chr5 144588947 144589201 -58496331 + L1MA9 LINE L1 6028 6274 -38 580 211 89 47 chr5 144589242 144589455 -58496077 - L1ME3A LINE L1 -1 6169 5948 279 0 0 0 chr5 144589458 144589489 -58496043 + (TG)n Simple_repeat Simple_repeat 2 32 0 1108 197 74 130 chr5 144589580 144589782 -58495750 + MER66A LTR ERV1 97 181 -297 1916 120 0 0 chr5 144589782 144590048 -58495484 + AluSc SINE Alu 35 300 -9 1108 197 74 130 chr5 144590048 144590331 -58495201 + MER66A LTR ERV1 181 478 0 490 94 0 0 chr5 144590438 144590502 -58495030 + MER66A-int LTR ERV1 6608 6671 -5 784 223 119 88 chr5 144590503 144590950 -58494582 + MER66A LTR ERV1 97 418 -60 2599 136 24 0 chr5 144590950 144591368 -58494164 - MSTA LTR MaLR 0 428 1 784 223 119 88 chr5 144591368 144591415 -58494117 + MER66A LTR ERV1 418 462 -16 434 252 0 97 chr5 144592044 144592250 -58493282 + L1PA15 LINE L1 1550 1735 -5846 556 309 116 41 chr5 144592272 144592735 -58492797 + L1PA12 LINE L1 1607 2079 -5502 4291 150 32 4 chr5 144592791 144593483 -58492049 + MER50 LTR ERV1 1 711 -23 14856 216 45 17 chr5 144593484 144599083 -58486449 + L1PA15 LINE L1 1837 7603 0 234 0 0 0 chr5 144599669 144599695 -58485837 + (TG)n Simple_repeat Simple_repeat 1 26 0 210 71 0 0 chr5 144599694 144599722 -58485810 + (CG)n Simple_repeat Simple_repeat 2 29 0 * 23 54 0 0 chr5 144600012 144600049 -58485483 + AT_rich Low_complexity Low_complexity 1 37 0 2443 78 0 0 chr5 144600078 144600385 -58485147 - AluY SINE Alu -4 307 1 1912 239 85 27 chr5 144600969 144601526 -58484006 + L1ME1 LINE L1 5448 5971 -195 237 33 0 0 chr5 144601526 144601556 -58483976 + (TG)n Simple_repeat Simple_repeat 1 30 0 216 0 0 0 chr5 144601555 144601579 -58483953 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 1912 239 85 27 chr5 144601556 144601580 -58483952 + L1ME1 LINE L1 5971 5992 -174 2018 126 0 4 chr5 144601580 144601858 -58483674 - AluSg SINE Alu -33 277 1 1912 239 85 27 chr5 144601858 144601972 -58483560 + L1ME1 LINE L1 5992 6160 -6 14937 37 9 2 chr5 144601987 144604583 -58480949 + L1PA5 LINE L1 3544 6147 -7 331 219 10 0 chr5 144604824 144604920 -58480612 + L1MA7 LINE L1 6194 6290 -1 312 119 0 12 chr5 144604925 144604985 -58480547 + Alu SINE Alu 244 290 -10 809 285 70 27 chr5 144604986 144605431 -58480101 + L1ME LINE L1 5308 5771 -399 1045 127 4 181 chr5 144605467 144605726 -58479806 + MER20 DNA MER1_type 2 214 -5 24 0 0 0 chr5 144605779 144605803 -58479729 + AT_rich Low_complexity Low_complexity 1 24 0 1543 110 3 120 chr5 144606077 144606258 -58479274 - AluY SINE Alu -17 294 162 2765 25 18 0 chr5 144606258 144606584 -58478948 - L1PA2 LINE L1 -4 6151 5820 1543 110 3 120 chr5 144606584 144606711 -58478821 - AluY SINE Alu -149 162 22 31 0 0 0 chr5 144607227 144607258 -58478274 + AT_rich Low_complexity Low_complexity 1 31 0 233 194 0 16 chr5 144608340 144608402 -58477130 + CT-rich Low_complexity Low_complexity 3 63 0 2021 119 31 64 chr5 144608416 144608776 -58476756 - MER7A DNA MER2_type 0 346 1 482 262 41 57 chr5 144608785 144608994 -58476538 - MIR SINE MIR -7 255 50 702 267 107 35 chr5 144609563 144610233 -58475299 - L1M4 LINE L1 -666 5508 4808 * 1973 193 16 32 chr5 144610221 144610282 -58475250 + L1MD3 LINE L1 7538 7598 -397 3398 112 4 0 chr5 144610282 144610799 -58474733 + L1PA13 LINE L1 5644 6162 -1 1973 193 16 32 chr5 144610799 144611172 -58474360 + L1MD3 LINE L1 7598 7965 -30 243 217 50 0 chr5 144614010 144614070 -58471462 - MIR SINE MIR -74 188 126 2413 165 19 25 chr5 144614131 144614346 -58471186 + MSTC LTR MaLR 1 213 -215 2238 57 47 17 chr5 144614346 144614644 -58470888 + AluY SINE Alu 1 307 -4 2413 165 19 25 chr5 144614644 144614859 -58470673 + MSTC LTR MaLR 213 428 0 251 282 72 111 chr5 144615378 144615559 -58469973 - MLT1K LTR MaLR -208 380 207 805 152 0 0 chr5 144615851 144615976 -58469556 + AluSg/x SINE Alu 177 301 -11 262 380 65 0 chr5 144615995 144616103 -58469429 + L2 LINE L2 3125 3239 -33 324 296 0 11 chr5 144616592 144616680 -58468852 - MER5A DNA MER1_type -3 186 100 21739 157 11 18 chr5 144616824 144620950 -58464582 + L1P3 LINE L1 981 5087 -1374 1592 111 17 4 chr5 144620950 144621165 -58464367 + L1PA8A LINE L1 5894 6131 0 283 77 0 0 chr5 144621332 144621371 -58464161 + L1MB1 LINE L1 6120 6158 -31 * 396 284 0 0 chr5 144621369 144621471 -58464061 + L1MEc LINE L1 406 507 -5889 257 280 0 0 chr5 144621503 144621596 -58463936 + L1M4 LINE L1 3702 3794 -2352 302 308 60 22 chr5 144621598 144621783 -58463749 + L1M4 LINE L1 3895 4086 -2060 * 1326 259 113 23 chr5 144621777 144622345 -58463187 - L1MC4a LINE L1 -1785 6023 5405 274 278 74 19 chr5 144622898 144623060 -58462472 + L1MC4a LINE L1 6096 6266 -1542 1042 246 140 41 chr5 144623239 144623752 -58461780 + L1MC4 LINE L1 6755 7318 -724 661 294 31 36 chr5 144623758 144624176 -58461356 + L1MC4 LINE L1 7488 7903 -139 211 218 0 26 chr5 144624194 144624272 -58461260 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 22 0 0 0 chr5 144624398 144624420 -58461112 + AT_rich Low_complexity Low_complexity 1 22 0 447 300 78 71 chr5 144624420 144625517 -58460015 + L1M4 LINE L1 4076 5179 -967 7164 219 112 82 chr5 144625795 144628611 -58456921 + L1M2a LINE L1 2 3257 -3910 2480 67 0 0 chr5 144628611 144628911 -58456621 - AluY SINE Alu -11 300 1 7164 219 112 82 chr5 144628911 144629518 -58456014 + L1M2a LINE L1 3257 3844 -3323 2760 97 3 0 chr5 144629541 144629911 -58455621 + L1P3 LINE L1 1 371 -6090 7008 58 3 0 chr5 144629912 144631205 -58454327 + L1PA7 LINE L1 4861 6154 0 1311 245 21 19 chr5 144631212 144631277 -58454255 + L1M2a LINE L1 3870 3933 -3234 2443 185 22 0 chr5 144631277 144631694 -58453838 + MSTB LTR MaLR 1 426 0 1311 245 21 19 chr5 144631694 144632109 -58453423 + L1M2a LINE L1 3933 4351 -2816 1291 137 49 27 chr5 144632101 144632468 -58453064 + L1MA5 LINE L1 5082 5468 -743 * 3049 76 13 0 chr5 144632468 144632861 -58452671 + MLT2A1 LTR ERVL 2 399 -45 334 184 15 122 chr5 144632867 144633063 -58452469 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 197 138 5 122 chr5 144633108 144633304 -58452228 + (CATATA)n Simple_repeat Simple_repeat 4 176 0 306 265 66 0 chr5 144633308 144633474 -58452058 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 439 154 15 129 chr5 144633450 144633651 -58451881 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 325 140 21 86 chr5 144633666 144633759 -58451773 + L1MC4 LINE L1 6613 6699 -1343 429 134 41 28 chr5 144633762 144634013 -58451519 + (TATATG)n Simple_repeat Simple_repeat 1 254 0 326 105 0 35 chr5 144634021 144634078 -58451454 + MLT2A1 LTR ERVL 390 444 0 4167 177 14 4 chr5 144634078 144634907 -58450625 + L1MA5 LINE L1 5463 6300 0 22 80 0 0 chr5 144635628 144635678 -58449854 + AT_rich Low_complexity Low_complexity 1 50 0 1355 243 8 45 chr5 144635733 144636066 -58449466 - MLT1A1 LTR MaLR 0 365 46 2114 111 7 7 chr5 144636066 144636363 -58449169 - AluSx SINE Alu -15 297 1 1355 243 8 45 chr5 144636363 144636407 -58449125 - MLT1A1 LTR MaLR -319 46 2 1110 281 74 28 chr5 144636798 144637336 -58448196 + L1ME3A LINE L1 5302 5864 -306 23 54 0 0 chr5 144637370 144637407 -58448125 + AT_rich Low_complexity Low_complexity 1 37 0 959 194 50 6 chr5 144637885 144638065 -58447467 - MER5A DNA MER1_type -1 188 1 283 284 223 20 chr5 144638097 144638245 -58447287 + MIR3 SINE MIR 20 197 -11 522 151 0 0 chr5 144639681 144639787 -58445745 + (TG)n Simple_repeat Simple_repeat 2 107 0 22 35 0 0 chr5 144640287 144640316 -58445216 + AT_rich Low_complexity Low_complexity 1 29 0 715 152 0 0 chr5 144640320 144640452 -58445080 - L1MA4 LINE L1 -6 6294 6163 180 279 16 101 chr5 144640646 144640775 -58444757 - MIR SINE MIR -72 190 73 22 56 0 0 chr5 144641464 144641500 -58444032 + AT_rich Low_complexity Low_complexity 1 36 0 207 130 0 43 chr5 144641769 144641815 -58443717 + (GAAAA)n Simple_repeat Simple_repeat 1 44 0 405 268 77 72 chr5 144643260 144643546 -58441986 + HAL1 LINE L1 822 1112 -1395 2227 91 0 20 chr5 144643546 144643844 -58441688 + AluY SINE Alu 1 292 -19 405 268 77 72 chr5 144643844 144643919 -58441613 + HAL1 LINE L1 1112 1185 -1322 339 232 89 0 chr5 144644085 144644197 -58441335 - L1M4 LINE L1 -3528 2618 2497 1010 214 16 8 chr5 144644286 144644534 -58440998 + L1 LINE L1 4667 4916 -1230 28730 94 8 3 chr5 144644542 144645198 -58440334 + L1PA7 LINE L1 1178 1829 -4325 1625 98 0 19 chr5 144645198 144645413 -58440119 - AluY SINE Alu -20 291 81 28730 94 8 3 chr5 144645413 144649693 -58435839 + L1PA7 LINE L1 1829 6143 -11 363 23 0 0 chr5 144649693 144649737 -58435795 + (CATA)n Simple_repeat Simple_repeat 2 45 0 28730 94 8 3 chr5 144649737 144649750 -58435782 + L1PA7 LINE L1 6143 6154 0 34 79 0 0 chr5 144649864 144649940 -58435592 + AT_rich Low_complexity Low_complexity 1 76 0 218 252 291 19 chr5 144651412 144651515 -58434017 + MIR SINE MIR 127 257 -5 242 95 24 0 chr5 144652136 144652178 -58433354 + (CA)n Simple_repeat Simple_repeat 1 43 0 624 342 118 21 chr5 144652652 144653187 -58432345 + L2 LINE L2 189 775 -2539 563 311 227 30 chr5 144653193 144653836 -58431696 + L2 LINE L2 1331 2100 -1214 3093 136 8 14 chr5 144653855 144653959 -58431573 - L1PA16 LINE L1 -2 6164 6061 2445 147 63 11 chr5 144653959 144654421 -58431111 + MER66B LTR ERV1 1 486 0 3093 136 8 14 chr5 144654421 144654816 -58430716 - L1PA16 LINE L1 -105 6061 5668 603 320 116 38 chr5 144654820 144655270 -58430262 + L2 LINE L2 2466 2950 -364 1000 287 65 0 chr5 144655316 144655577 -58429955 - LTR16A LTR ERVL -3 447 170 308 331 83 18 chr5 144655797 144655966 -58429566 + L2 LINE L2 3132 3311 -2 1923 126 0 0 chr5 144656241 144656495 -58429037 + AluSx SINE Alu 7 260 -52 19342 54 3 3 chr5 144656495 144659752 -58425780 + L1PA5 LINE L1 2894 6154 0 1358 302 76 34 chr5 144659969 144660735 -58424797 + HAL1 LINE L1 13 810 -1697 875 286 31 31 chr5 144660852 144661310 -58424222 + L1M4 LINE L1 4523 4980 -1166 992 326 23 27 chr5 144661322 144661804 -58423728 + L1ME LINE L1 68 547 -5523 2575 182 37 22 chr5 144661820 144662310 -58423222 - MER89-int LTR ERV1 -90 6711 6215 1451 145 42 45 chr5 144662310 144662621 -58422911 - MER89-int LTR ERV1 -4831 1970 1661 180 0 0 0 chr5 144662708 144662728 -58422804 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 453 177 21 10 chr5 144662800 144662896 -58422636 - MER89 LTR ERV1 -462 97 1 2900 18 0 0 chr5 144663051 144663379 -58422153 - L1PA2 LINE L1 -331 5824 5497 2919 23 9 0 chr5 144663379 144663720 -58421812 + L1PA2 LINE L1 5807 6155 0 5301 108 20 13 chr5 144663800 144664428 -58421104 - L1MA2 LINE L1 0 6304 5667 2458 88 0 0 chr5 144664428 144664736 -58420796 - AluSc SINE Alu -1 308 1 5301 108 20 13 chr5 144664736 144664956 -58420576 - L1MA2 LINE L1 -637 5667 5450 16037 162 22 19 chr5 144664956 144665119 -58420413 - L1 LINE L1 -3111 4454 4293 7698 22 2 2 chr5 144665119 144666401 -58419131 - L1PA3 LINE L1 -1 6154 4875 16037 162 22 19 chr5 144666401 144666886 -58418646 - L1 LINE L1 -3272 4293 3811 2193 96 10 0 chr5 144666886 144667178 -58418354 + AluY SINE Alu 1 295 -16 16037 162 22 19 chr5 144667178 144669944 -58415588 - L1 LINE L1 -3754 3811 1032 5451 70 3 1 chr5 144669945 144670632 -58414900 + LTR12 LTR ERV1 1 688 0 22464 96 16 6 chr5 144670632 144673740 -58411792 + HERV9 LTR ERV1 1 3139 -5260 20346 83 12 8 chr5 144673747 144674618 -58410914 + HERV9 LTR ERV1 4080 4946 -3453 2129 116 3 34 chr5 144674618 144674938 -58410594 + AluSg SINE Alu 1 310 0 20346 83 12 8 chr5 144674938 144678385 -58407147 + HERV9 LTR ERV1 4946 8399 0 5171 65 41 1 chr5 144678386 144679046 -58406486 + LTR12 LTR ERV1 2 687 -1 5171 182 58 20 chr5 144679046 144679361 -58406171 - L1 LINE L1 -6530 1035 733 186 43 0 0 chr5 144679361 144679384 -58406148 + (TCTCC)n Simple_repeat Simple_repeat 4 26 0 5171 182 58 20 chr5 144679384 144679759 -58405773 - L1 LINE L1 -6832 733 295 2503 154 62 10 chr5 144679759 144680245 -58405287 - MER9 LTR ERVK 0 511 1 5171 182 58 20 chr5 144680245 144680537 -58404995 - L1 LINE L1 -7270 295 15 243 61 0 0 chr5 144682157 144682190 -58403342 + (CA)n Simple_repeat Simple_repeat 2 34 0 2496 54 0 3 chr5 144682224 144682521 -58403011 - AluY SINE Alu -15 296 1 1325 220 45 58 chr5 144682742 144683263 -58402269 - MER67C LTR ERV1 -33 481 1 532 298 38 57 chr5 144683331 144683596 -58401936 - MER67C-int LTR ERV1 -111 4825 4566 546 191 18 9 chr5 144683876 144683986 -58401546 - MER67C-int LTR ERV1 -467 4469 4359 267 189 40 40 chr5 144684044 144684118 -58401414 - LTR37A LTR ERV1 -307 119 46 2485 83 0 11 chr5 144684131 144684479 -58401053 - L1PA13 LINE L1 -6 6157 5814 2413 215 19 28 chr5 144684480 144685015 -58400517 - MER67C-int LTR ERV1 -701 4235 3706 1162 247 68 19 chr5 144685016 144685384 -58400148 - MER66A LTR ERV1 0 478 93 267 56 0 0 chr5 144685424 144685460 -58400072 + MER31-int LTR ERV1 3673 3708 -1228 1902 231 48 64 chr5 144685649 144686360 -58399172 - MER67C-int LTR ERV1 -1887 3049 2373 209 409 45 0 chr5 144686911 144686999 -58398533 + MIR SINE MIR 7 98 -164 986 236 23 0 chr5 144687037 144687253 -58398279 - MIR SINE MIR -29 233 13 21 36 0 0 chr5 144687488 144687516 -58398016 + AT_rich Low_complexity Low_complexity 1 28 0 1847 88 0 0 chr5 144689722 144689950 -58395582 + AluSc SINE Alu 1 228 -81 243 26 0 0 chr5 144689951 144689989 -58395543 + AluSc SINE Alu 263 300 -2 2478 202 40 12 chr5 144690761 144691267 -58394265 - MLT2B1 LTR ERVL 0 520 1 461 200 61 17 chr5 144691672 144691787 -58393745 + L2 LINE L2 3190 3309 -4 1913 147 17 33 chr5 144692061 144692422 -58393110 - L1MB1 LINE L1 -5 6163 5809 36 40 0 0 chr5 144692525 144692575 -58392957 + AT_rich Low_complexity Low_complexity 1 50 0 317 303 35 28 chr5 144692632 144692777 -58392755 - MIR SINE MIR 0 262 117 415 69 0 0 chr5 144693104 144693162 -58392370 + L1PA6 LINE L1 6097 6154 0 21 36 0 0 chr5 144693239 144693267 -58392265 + AT_rich Low_complexity Low_complexity 1 28 0 450 198 0 10 chr5 144693273 144693369 -58392163 - L1MA10 LINE L1 -64 6270 6176 240 184 0 0 chr5 144693369 144693418 -58392114 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr5 144693512 144693541 -58391991 + AT_rich Low_complexity Low_complexity 1 29 0 207 329 14 0 chr5 144693602 144693675 -58391857 - MER5C DNA MER1_type -249 75 2 33 25 0 0 chr5 144694784 144694824 -58390708 + AT_rich Low_complexity Low_complexity 1 40 0 656 191 7 0 chr5 144695181 144695317 -58390215 + L1MA8 LINE L1 6154 6290 -1 22 0 0 0 chr5 144699372 144699394 -58386138 + AT_rich Low_complexity Low_complexity 1 22 0 339 169 34 34 chr5 144699894 144700042 -58385490 + (TA)n Simple_repeat Simple_repeat 1 148 0 529 63 89 0 chr5 144700479 144700558 -58384974 - L1MA8 LINE L1 -79 6212 6127 * 6439 31 5 0 chr5 144700535 144701307 -58384225 + L1PA4 LINE L1 5375 6150 -5 2399 111 22 36 chr5 144701303 144701718 -58383814 - L1MA8 LINE L1 -152 6139 5731 * 410 152 0 0 chr5 144701718 144701785 -58383747 + L1MA8 LINE L1 6203 6281 -10 5009 150 15 0 chr5 144701855 144702704 -58382828 - L1PA11 LINE L1 -1435 4711 3850 6236 94 21 9 chr5 144702709 144704152 -58381380 + L1PA11 LINE L1 4712 6172 -2 394 273 52 63 chr5 144704812 144705098 -58380434 - HAL1 LINE L1 0 2507 2225 588 289 116 0 chr5 144705610 144705835 -58379697 - HAL1 LINE L1 -625 1882 1632 2561 128 6 11 chr5 144705873 144706479 -58379053 + L1M2 LINE L1 5059 5664 -627 591 223 142 64 chr5 144706605 144706838 -58378694 - MIR SINE MIR 0 262 12 201 39 0 0 chr5 144707284 144707310 -58378222 + (CA)n Simple_repeat Simple_repeat 1 26 0 418 288 38 22 chr5 144707579 144707763 -58377769 + L1MC/D LINE L1 5067 5253 -893 253 318 62 60 chr5 144707764 144708132 -58377400 + L1MC/D LINE L1 5255 5623 -2185 1931 193 53 8 chr5 144708278 144708652 -58376880 + MSTD LTR MaLR 6 396 0 827 41 0 0 chr5 144708840 144708937 -58376595 - AluY SINE Alu -12 299 203 301 278 108 57 chr5 144709166 144709378 -58376154 + HAL1 LINE L1 4 226 -2281 216 82 41 20 chr5 144709621 144709670 -58375862 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 240 86 0 0 chr5 144709920 144709955 -58375577 + (TA)n Simple_repeat Simple_repeat 1 35 0 606 329 172 27 chr5 144709977 144710639 -58374893 + HAL1 LINE L1 980 1737 -770 22 56 0 0 chr5 144710780 144710816 -58374716 + AT_rich Low_complexity Low_complexity 1 36 0 318 227 0 0 chr5 144711143 144711218 -58374314 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 7051 58 2 1 chr5 144711315 144712321 -58373211 + L1PA7 LINE L1 5148 6152 -2 431 257 9 0 chr5 144712337 144712450 -58373082 + L1M4 LINE L1 4490 4603 -1543 332 246 8 59 chr5 144712712 144712830 -58372702 + HAL1b LINE L1 747 858 -490 232 329 34 54 chr5 144712973 144713082 -58372450 + HAL1 LINE L1 2251 2358 -149 366 23 0 0 chr5 144713082 144713125 -58372407 + (CA)n Simple_repeat Simple_repeat 1 43 0 232 329 34 54 chr5 144713125 144713164 -58372368 + HAL1 LINE L1 2358 2396 -111 355 240 0 64 chr5 144713390 144713515 -58372017 - MIR SINE MIR -97 165 49 324 309 90 39 chr5 144713868 144714613 -58370919 + L1MC4a LINE L1 2205 2987 -3159 410 298 104 41 chr5 144714638 144715243 -58370289 + L1MC4a LINE L1 3296 3938 -2208 192 125 0 0 chr5 144715323 144715355 -58370177 + (CA)n Simple_repeat Simple_repeat 1 32 0 627 152 15 8 chr5 144715468 144715600 -58369932 + GA-rich Low_complexity Low_complexity 4 136 0 211 307 23 34 chr5 144715621 144715709 -58369823 + (CAGAGA)n Simple_repeat Simple_repeat 5 91 0 259 309 53 37 chr5 144715712 144715900 -58369632 + L1MC4a LINE L1 4015 4205 -1941 383 325 98 17 chr5 144715909 144716143 -58369389 + L1MC4a LINE L1 4229 4481 -1665 244 256 77 26 chr5 144716405 144716561 -58368971 + L1MC4a LINE L1 4889 5052 -1094 6227 95 28 1 chr5 144716643 144717529 -58368003 - L1PA13 LINE L1 0 6163 5254 2583 162 4 0 chr5 144717541 144718011 -58367521 + L1PA13 LINE L1 4777 5248 -898 1218 268 78 83 chr5 144718030 144718623 -58366909 + L1MC4a LINE L1 5187 5782 -364 997 139 82 0 chr5 144718623 144718817 -58366715 + L1MA8 LINE L1 6077 6286 -5 1218 268 78 83 chr5 144718817 144719251 -58366281 + L1MC4a LINE L1 5782 5223 -923 1720 189 17 3 chr5 144719251 144719553 -58365979 + AluJo SINE Alu 1 306 -6 1218 268 78 83 chr5 144719553 144719647 -58365885 + L1MC4a LINE L1 5222 5315 -831 1796 178 56 13 chr5 144719713 144720069 -58365463 + MLT1A1 LTR MaLR 1 426 -2 2511 258 96 17 chr5 144720144 144721089 -58364443 + L1MC4a LINE L1 6429 7448 -360 1054 167 0 0 chr5 144721114 144721288 -58364244 + FRAM SINE Alu 1 173 -3 505 235 121 42 chr5 144721370 144721448 -58364084 + L1MC4 LINE L1 7728 7798 -244 1741 153 33 0 chr5 144721448 144721747 -58363785 + AluJb SINE Alu 1 308 0 505 235 121 42 chr5 144721747 144721956 -58363576 + L1MC4 LINE L1 7798 8039 -3 292 375 62 6 chr5 144722130 144722290 -58363242 + MIR3 SINE MIR 20 188 -20 2080 122 7 0 chr5 144722741 144723035 -58362497 + AluSq SINE Alu 1 296 -17 735 245 0 12 chr5 144723740 144723903 -58361629 - FRAM SINE Alu -4 162 2 3245 260 95 64 chr5 144725220 144725480 -58360052 + HAL1 LINE L1 8 258 -2249 1620 176 51 20 chr5 144725480 144725775 -58359757 + AluJo SINE Alu 6 309 -3 3245 260 95 64 chr5 144725775 144727224 -58358308 + HAL1 LINE L1 258 1770 -737 475 312 77 49 chr5 144727262 144727694 -58357838 - MLT1J2 LTR MaLR 0 450 36 782 176 0 15 chr5 144728137 144728273 -58357259 + AluJb SINE Alu 170 303 -9 378 212 335 12 chr5 144728387 144728557 -58356975 + L1MC/D LINE L1 5597 5821 -1987 190 307 13 13 chr5 144729238 144729313 -58356219 + MIR SINE MIR 80 154 -108 226 254 0 0 chr5 144730256 144730315 -58355217 + MLT1J LTR MaLR 69 127 -384 2187 111 0 7 chr5 144730584 144730891 -58354641 + AluSc SINE Alu 1 305 -4 25 0 0 0 chr5 144731328 144731353 -58354179 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 144732588 144732616 -58352916 + AT_rich Low_complexity Low_complexity 1 28 0 215 71 91 30 chr5 144732886 144732985 -58352547 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 341 294 28 22 chr5 144733242 144733422 -58352110 - L1ME LINE L1 -401 5720 5540 634 272 72 11 chr5 144733812 144733992 -58351540 + MER115 DNA AcHobo 69 259 -434 1429 268 75 0 chr5 144734289 144734677 -58350855 + MER69 DNA AcHobo 369 785 -1741 416 315 41 34 chr5 144734686 144734978 -58350554 + L1M3b LINE L1 1216 1509 -5987 1134 113 28 0 chr5 144735550 144735727 -58349805 + L1MA4 LINE L1 6079 6260 -40 12084 219 42 39 chr5 144735813 144737423 -58348109 + L1M3b LINE L1 2097 3700 -3865 1973 107 22 0 chr5 144737423 144737715 -58347817 - AluY SINE Alu 0 300 3 12084 219 42 39 chr5 144737715 144740752 -58344780 + L1M3b LINE L1 3700 6672 -893 7196 43 5 6 chr5 144740752 144741677 -58343855 + L1PA5 LINE L1 5254 6154 0 947 199 28 0 chr5 144741688 144741864 -58343668 - MER5A DNA MER1_type -8 181 1 210 379 29 0 chr5 144744515 144744618 -58340914 + MIR3 SINE MIR 91 196 -12 505 310 71 5 chr5 144744716 144744900 -58340632 + MIR SINE MIR 8 203 -59 274 350 86 0 chr5 144747786 144747903 -58337629 - L2 LINE L2 0 3313 3187 527 181 309 58 chr5 144748116 144748375 -58337157 - MER5C DNA MER1_type 0 324 1 23 0 0 0 chr5 144748738 144748761 -58336771 + AT_rich Low_complexity Low_complexity 1 23 0 312 296 28 9 chr5 144751237 144751345 -58334187 + MIR SINE MIR 44 153 -109 277 215 0 15 chr5 144751348 144751413 -58334119 + L2 LINE L2 3250 3313 0 1522 162 85 15 chr5 144751716 144751988 -58333544 + AluJo SINE Alu 6 296 -16 1828 146 23 26 chr5 144752938 144753240 -58332292 + AluSx SINE Alu 1 301 -11 364 243 59 52 chr5 144753495 144753631 -58331901 + MIR SINE MIR 20 156 -106 358 192 20 71 chr5 144753840 144753939 -58331593 - LTR68 LTR ERV1 -390 350 257 2633 185 26 19 chr5 144754049 144754430 -58331102 + L1PB4 LINE L1 4056 4444 -1702 4511 149 18 40 chr5 144754430 144755231 -58330301 - LTR39 LTR ERV1 0 783 1 2633 185 26 19 chr5 144755231 144755426 -58330106 + L1PB4 LINE L1 4444 4636 -1510 5025 126 30 4 chr5 144755442 144756273 -58329259 + L1PB4 LINE L1 5296 6148 -8 234 224 79 0 chr5 144756273 144756349 -58329183 - LTR68 LTR ERV1 -646 94 13 446 298 132 18 chr5 144756869 144757097 -58328435 - MIR SINE MIR 0 262 9 279 0 0 0 chr5 144757422 144757453 -58328079 + (CA)n Simple_repeat Simple_repeat 2 32 0 2763 165 98 77 chr5 144758046 144758556 -58326976 - LTR48 LTR ERV1 0 787 254 2468 75 0 0 chr5 144758556 144758862 -58326670 - AluSg SINE Alu -4 306 1 2763 165 98 77 chr5 144758862 144759119 -58326413 - LTR48 LTR ERV1 -533 254 4 220 303 210 8 chr5 144759694 144759813 -58325719 - MIR SINE MIR -71 191 49 1919 126 44 82 chr5 144759837 144760047 -58325485 - THE1C LTR MaLR 0 375 185 1641 233 42 84 chr5 144760047 144760686 -58324846 + LTR9 LTR ERV1 1 612 0 1919 126 44 82 chr5 144760686 144760865 -58324667 - THE1C LTR MaLR -190 185 1 306 280 213 27 chr5 144761760 144761910 -58323622 + MIR SINE MIR 31 208 -54 1297 76 92 0 chr5 144761918 144762103 -58323429 - MER30 DNA MER1_type -28 202 1 367 279 10 0 chr5 144762241 144762345 -58323187 + MER103 DNA DNA 16 120 -46 213 308 0 0 chr5 144762911 144762963 -58322569 + MER5A DNA MER1_type 131 182 -7 1495 121 81 16 chr5 144763094 144763342 -58322190 + MER21A LTR ERV1 1 264 -667 3208 157 39 9 chr5 144763348 144763883 -58321649 + MER21A LTR ERV1 377 927 -4 29 47 0 0 chr5 144764008 144764051 -58321481 + AT_rich Low_complexity Low_complexity 1 43 0 1199 175 51 64 chr5 144764479 144764826 -58320706 - MER67C LTR ERV1 -243 271 1 262 256 26 26 chr5 144764995 144765112 -58320420 + L1M4 LINE L1 2729 2845 -3301 712 149 21 101 chr5 144765113 144765301 -58320231 + L1MA6 LINE L1 6124 6296 -4 1395 142 100 14 chr5 144765402 144765683 -58319849 + L1MA9 LINE L1 6006 6310 -2 4647 189 81 18 chr5 144767561 144768672 -58316860 + L1M4b LINE L1 591 1767 -5088 * 38868 40 27 1 chr5 144768657 144773488 -58312044 + L1P LINE L1 2 4955 -1191 287 274 111 35 chr5 144823613 144823880 -58261652 + L1MC4a LINE L1 5612 5896 -268 29 47 0 0 chr5 144823883 144823926 -58261606 + AT_rich Low_complexity Low_complexity 1 43 0 495 319 34 19 chr5 144823966 144824061 -58261471 - L2 LINE L2 -158 3155 3063 2211 124 48 22 chr5 144824061 144824416 -58261116 + THE1B LTR MaLR 1 364 0 12025 83 6 8 chr5 144824416 144825998 -58259534 + THE1B-int LTR MaLR 1 1580 0 2014 126 50 34 chr5 144825998 144826356 -58259176 + THE1B LTR MaLR 1 364 0 495 319 34 19 chr5 144826356 144826465 -58259067 - L2 LINE L2 -249 3064 2946 29 0 0 0 chr5 144826543 144826572 -58258960 + AT_rich Low_complexity Low_complexity 1 29 0 2644 174 198 20 chr5 144827643 144828364 -58257168 - MER63C DNA MER1_type -79 851 1 233 267 33 0 chr5 144828729 144828789 -58256743 - L2 LINE L2 -33 3280 3219 1177 176 111 88 chr5 144829065 144829452 -58256080 - MSTD LTR MaLR 0 396 1 2041 130 7 0 chr5 144829587 144829880 -58255652 + AluSx SINE Alu 1 295 -17 1689 186 84 3 chr5 144829891 144829941 -58255591 - MLT2D LTR ERVL 0 414 369 243 88 0 0 chr5 144829941 144829975 -58255557 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 1689 186 84 3 chr5 144829975 144830305 -58255227 - MLT2D LTR ERVL -45 369 3 1464 179 96 13 chr5 144881893 144882205 -58203327 + MER2 DNA MER2_type 1 338 -7 243 0 0 0 chr5 144882212 144882239 -58203293 + (TG)n Simple_repeat Simple_repeat 2 28 0 372 313 68 20 chr5 144882489 144882636 -58202896 + L2 LINE L2 2900 3053 -219 430 242 96 38 chr5 144882656 144882813 -58202719 + LTR50 LTR ERVL 32 197 -598 2304 57 4 0 chr5 144882989 144883324 -58202208 - AluY SINE Alu 0 336 1 270 0 0 0 chr5 144883849 144883879 -58201653 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 189 94 0 0 chr5 144884485 144884517 -58201015 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2069 106 0 27 chr5 144884519 144884811 -58200721 - AluSq SINE Alu -29 284 1 486 354 79 25 chr5 144885468 144885798 -58199734 - L2 LINE L2 -252 3020 2655 1842 306 76 36 chr5 144885872 144886255 -58199277 - L2 LINE L2 -101 3212 2845 2054 123 38 0 chr5 144886255 144886547 -58198985 + AluSx SINE Alu 1 303 -9 1842 306 76 36 chr5 144886547 144887248 -58198284 - L2 LINE L2 -468 2845 2035 1012 202 0 0 chr5 144887249 144887447 -58198085 + L1PB4 LINE L1 650 847 -5299 2633 185 26 19 chr5 144987557 144987938 -58097594 + L1PB4 LINE L1 4056 4444 -1702 4511 149 18 40 chr5 144987938 144988739 -58096793 - LTR39 LTR ERV1 0 783 1 2633 185 26 19 chr5 144988739 144988934 -58096598 + L1PB4 LINE L1 4444 4636 -1510 5025 126 30 4 chr5 144988950 144989781 -58095751 + L1PB4 LINE L1 5296 6148 -8 234 224 79 0 chr5 144989781 144989857 -58095675 - LTR68 LTR ERV1 -646 94 13 446 298 132 18 chr5 144990377 144990605 -58094927 - MIR SINE MIR 0 262 9 261 0 0 0 chr5 144990930 144990959 -58094573 + (CA)n Simple_repeat Simple_repeat 2 30 0 2763 165 98 77 chr5 144991552 144992062 -58093470 - LTR48 LTR ERV1 0 787 254 2468 75 0 0 chr5 144992062 144992368 -58093164 - AluSg SINE Alu -4 306 1 2763 165 98 77 chr5 144992368 144992625 -58092907 - LTR48 LTR ERV1 -533 254 4 220 303 210 8 chr5 144993200 144993319 -58092213 - MIR SINE MIR -71 191 49 1919 126 44 82 chr5 144993343 144993553 -58091979 - THE1C LTR MaLR 0 375 185 1641 233 42 84 chr5 144993553 144994192 -58091340 + LTR9 LTR ERV1 1 612 0 1919 126 44 82 chr5 144994192 144994371 -58091161 - THE1C LTR MaLR -190 185 1 306 280 213 27 chr5 144995266 144995416 -58090116 + MIR SINE MIR 31 208 -54 1297 76 92 0 chr5 144995424 144995609 -58089923 - MER30 DNA MER1_type -28 202 1 367 279 10 0 chr5 144995747 144995851 -58089681 + MER103 DNA DNA 16 120 -46 213 308 0 0 chr5 144996417 144996469 -58089063 + MER5A DNA MER1_type 131 182 -7 1495 121 81 16 chr5 144996600 144996848 -58088684 + MER21A LTR ERV1 1 264 -667 3208 157 39 9 chr5 144996854 144997389 -58088143 + MER21A LTR ERV1 377 927 -4 29 47 0 0 chr5 144997514 144997557 -58087975 + AT_rich Low_complexity Low_complexity 1 43 0 1199 175 51 64 chr5 144997985 144998332 -58087200 - MER67C LTR ERV1 -243 271 1 262 256 26 26 chr5 144998501 144998618 -58086914 + L1M4 LINE L1 2729 2845 -3301 712 149 21 101 chr5 144998619 144998807 -58086725 + L1MA6 LINE L1 6124 6296 -4 1395 142 100 14 chr5 144998908 144999189 -58086343 + L1MA9 LINE L1 6006 6310 -2 4647 189 81 18 chr5 145001067 145002178 -58083354 + L1M4b LINE L1 591 1767 -5088 * 42552 55 24 5 chr5 145002163 145008878 -58076654 + L1PA2 LINE L1 238 6391 0 4545 244 68 47 chr5 145009053 145009319 -58076213 + L1M4b LINE L1 2476 2735 -4222 1765 38 0 0 chr5 145009319 145009529 -58076003 - L1PA3 LINE L1 0 6155 5946 4545 244 68 47 chr5 145009529 145009654 -58075878 + L1M4b LINE L1 2735 2856 -4101 1881 162 3 3 chr5 145009654 145009951 -58075581 + AluSx SINE Alu 1 297 -15 4545 244 68 47 chr5 145009951 145010191 -58075341 + L1M4b LINE L1 2856 3090 -3867 2728 186 20 2 chr5 145010191 145010691 -58074841 - LTR22 LTR ERVK 0 509 1 4545 244 68 47 chr5 145010691 145012211 -58073321 + L1M4b LINE L1 3090 4625 -2332 2039 243 46 3 chr5 145012208 145012776 -58072756 + L1M4b LINE L1 4833 5424 -1533 * 189 74 0 0 chr5 145012823 145012850 -58072682 + (CAA)n Simple_repeat Simple_repeat 2 28 0 350 232 61 10 chr5 145012851 145012950 -58072582 + MER103 DNA DNA 3 106 -60 23 33 0 0 chr5 145014402 145014432 -58071100 + AT_rich Low_complexity Low_complexity 1 30 0 245 258 61 39 chr5 145015436 145015605 -58069927 + L1ME LINE L1 565 738 -5896 2748 78 6 0 chr5 145015906 145016253 -58069279 + THE1A LTR MaLR 7 355 0 11489 100 5 1 chr5 145016253 145017808 -58067724 + THE1A-int LTR MaLR 1 1560 -20 2051 104 7 36 chr5 145017808 145018115 -58067417 + THE1A LTR MaLR 55 352 -3 240 275 68 58 chr5 145018581 145018978 -58066554 + L1ME LINE L1 1308 1708 -4834 494 317 130 42 chr5 145019028 145019388 -58066144 + L1ME LINE L1 1948 2370 -4455 2158 126 3 0 chr5 145019388 145019682 -58065850 - AluSx SINE Alu -17 295 1 494 317 130 42 chr5 145019682 145019845 -58065687 + L1ME LINE L1 2370 2517 -4308 3330 259 61 79 chr5 145019939 145022431 -58063101 + L1ME LINE L1 2555 5004 -1640 * 4375 156 85 16 chr5 145022399 145022870 -58062662 + L1MA7 LINE L1 5796 6233 -556 480 18 0 0 chr5 145022870 145022927 -58062605 + (TG)n Simple_repeat Simple_repeat 2 58 0 11360 25 0 13 chr5 145022927 145023897 -58061635 - L1PA3 LINE L1 -11 6144 5163 2645 19 6 10 chr5 145023897 145024209 -58061323 - AluY SINE Alu 0 311 1 11360 25 0 13 chr5 145024209 145025367 -58060165 - L1PA3 LINE L1 -992 5163 4034 4375 156 85 16 chr5 145025367 145025824 -58059708 + L1MA7 LINE L1 6232 6789 0 590 298 73 5 chr5 145025866 145026249 -58059283 + L1M4 LINE L1 4156 4564 -1582 356 0 23 0 chr5 145026373 145026417 -58059115 + (TTA)n Simple_repeat Simple_repeat 2 46 0 362 311 83 6 chr5 145026623 145026803 -58058729 + MIR SINE MIR 52 245 -17 702 0 0 0 chr5 145026839 145026921 -58058611 - L1PA4 LINE L1 -2 6153 6072 394 317 98 6 chr5 145027234 145027398 -58058134 + MER117 DNA MER1_type 9 187 -10 27 49 0 0 chr5 145027541 145027582 -58057950 + AT_rich Low_complexity Low_complexity 1 41 0 1394 55 0 0 chr5 145027800 145027981 -58057551 - L1P LINE L1 -3041 3105 2925 4096 49 14 8 chr5 145028013 145028523 -58057009 + L1PA7 LINE L1 5631 6143 -11 1336 184 139 4 chr5 145028692 145028958 -58056574 + AluJo SINE Alu 1 302 0 1822 178 15 15 chr5 145029227 145029570 -58055962 + MER61A LTR ERV1 1 343 0 192 302 70 23 chr5 145030451 145030537 -58054995 - L2 LINE L2 -22 3250 3161 274 317 89 0 chr5 145031411 145031512 -58054020 - L2 LINE L2 -9 3263 3154 938 194 11 5 chr5 145031607 145031793 -58053739 + MER5A DNA MER1_type 1 187 -2 219 69 0 0 chr5 145032297 145032326 -58053206 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2643 55 0 0 chr5 145032956 145033267 -58052265 - AluY SINE Alu 0 311 1 409 303 237 14 chr5 145033352 145033787 -58051745 + MLT1L LTR MaLR 1 532 -83 334 290 71 101 chr5 145034142 145034404 -58051128 - HAL1 LINE L1 -1352 1155 887 4939 101 14 25 chr5 145034404 145035194 -58050338 - L1MA2 LINE L1 -10 6294 5514 334 290 71 101 chr5 145035194 145035257 -58050275 - HAL1 LINE L1 -1620 887 840 2070 113 31 3 chr5 145035257 145035550 -58049982 - AluSc SINE Alu -8 301 1 334 290 71 101 chr5 145035550 145035588 -58049944 - HAL1 LINE L1 -1667 840 802 2140 117 0 0 chr5 145035823 145036140 -58049392 - AluY SINE Alu 0 317 1 235 324 19 19 chr5 145037062 145037170 -58048362 - MIR SINE MIR -95 167 60 24 32 0 0 chr5 145037942 145037973 -58047559 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 145039115 145039140 -58046392 + AT_rich Low_complexity Low_complexity 1 25 0 207 114 0 0 chr5 145039311 145039346 -58046186 + (TC)n Simple_repeat Simple_repeat 2 36 0 4132 134 43 51 chr5 145039511 145040111 -58045421 + L1MA4A LINE L1 5456 6049 -254 2347 93 0 10 chr5 145040111 145040424 -58045108 - AluY SINE Alu -1 310 1 4132 134 43 51 chr5 145040424 145040667 -58044865 + L1MA4A LINE L1 6049 6292 -11 22 0 0 0 chr5 145040696 145040718 -58044814 + AT_rich Low_complexity Low_complexity 1 22 0 1705 58 0 0 chr5 145041847 145042072 -58043460 + L1MA2 LINE L1 6080 6304 0 25 0 0 0 chr5 145042072 145042097 -58043435 + AT_rich Low_complexity Low_complexity 1 25 0 2154 115 0 46 chr5 145042683 145043189 -58042343 + AluSg SINE Alu 1 310 0 463 265 184 36 chr5 145043588 145043784 -58041748 + MIR SINE MIR 32 256 -6 28 0 0 0 chr5 145044275 145044303 -58041229 + AT_rich Low_complexity Low_complexity 1 28 0 381 75 0 0 chr5 145045886 145045939 -58039593 + (TG)n Simple_repeat Simple_repeat 2 54 0 895 308 49 29 chr5 145046279 145046627 -58038905 - LTR16C LTR ERVL -4 487 133 182 61 0 30 chr5 145047915 145047948 -58037584 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 291 214 43 14 chr5 145048563 145048633 -58036899 + GA-rich Low_complexity Low_complexity 3 74 0 958 226 81 48 chr5 145049695 145050189 -58035343 + L1PB1 LINE L1 95 5782 -369 378 127 0 0 chr5 145050191 145050262 -58035270 + (TG)n Simple_repeat Simple_repeat 1 71 0 240 35 0 0 chr5 145050262 145050291 -58035241 + (TA)n Simple_repeat Simple_repeat 2 30 0 2335 87 43 11 chr5 145050294 145050641 -58034891 + L1PB1 LINE L1 5794 6151 0 347 286 136 0 chr5 145050653 145050807 -58034725 + HAL1b LINE L1 432 606 -742 680 284 41 21 chr5 145051228 145051590 -58033942 - MLT1I LTR MaLR -2 407 1 1067 192 25 0 chr5 145051779 145051982 -58033550 - MER3 DNA MER1_type 0 209 2 23 33 0 0 chr5 145052049 145052079 -58033453 + AT_rich Low_complexity Low_complexity 1 30 0 599 360 4 8 chr5 145052259 145052506 -58033026 - MIR SINE MIR 0 262 17 848 271 41 43 chr5 145052507 145052765 -58032767 + L1M4 LINE L1 2708 2965 -3181 1578 128 4 9 chr5 145052765 145052834 -58032698 + AluSg/x SINE Alu 66 134 -178 1977 139 7 0 chr5 145052834 145053129 -58032403 + AluSq SINE Alu 1 297 -16 1578 128 4 9 chr5 145053129 145053286 -58032246 + AluSg/x SINE Alu 134 291 -21 848 271 41 43 chr5 145053286 145053558 -58031974 + L1M4 LINE L1 2965 3237 -2909 18576 61 9 0 chr5 145053559 145055938 -58029594 + L1PA4 LINE L1 1 2400 -3746 24349 40 1 2 chr5 145055938 145059726 -58025806 + L1PA4 LINE L1 2348 6145 -10 1185 128 6 6 chr5 145059743 145059922 -58025610 + AluSc SINE Alu 119 297 -12 303 146 0 0 chr5 145059932 145059973 -58025559 + Alu SINE Alu 1 41 -261 1016 148 0 0 chr5 145059973 145060128 -58025404 + AluSg/x SINE Alu 144 298 -12 9958 152 19 4 chr5 145060135 145062900 -58022632 + L1MA1 LINE L1 3496 6302 0 3655 176 10 3 chr5 145062916 145063782 -58021750 + L1PB4 LINE L1 5031 5900 -256 232 215 15 15 chr5 145063790 145063855 -58021677 + L1ME LINE L1 5855 5919 -243 * 2001 263 106 36 chr5 145063852 145064693 -58020839 + L1ME3A LINE L1 5261 6160 -10 1396 207 0 20 chr5 145065198 145065449 -58020083 - Tigger7 DNA MER2_type -487 246 1 445 316 39 47 chr5 145065682 145065916 -58019616 - MIR SINE MIR -25 237 6 330 285 139 36 chr5 145067126 145067263 -58018269 - MER91A DNA MER1_type -32 164 14 278 258 4 4 chr5 145067576 145067836 -58017696 + (CA)n Simple_repeat Simple_repeat 1 260 0 2264 253 53 29 chr5 145069123 145070113 -58015419 + L1MA9 LINE L1 2690 3713 -3852 300 256 22 22 chr5 145070126 145070216 -58015316 + L1MC4 LINE L1 6614 6703 -1339 256 155 28 0 chr5 145070222 145070293 -58015239 + (TA)n Simple_repeat Simple_repeat 1 73 0 1427 217 53 35 chr5 145070459 145070892 -58014640 + L1MA9 LINE L1 3864 4304 -3261 2892 172 57 0 chr5 145070895 145071476 -58014056 + L1MA9 LINE L1 5746 6359 -1206 2251 137 57 3 chr5 145071477 145071865 -58013667 + L1MA9 LINE L1 7318 7726 -5 681 302 14 36 chr5 145072007 145072229 -58013303 + MLT1I LTR MaLR 188 404 -5 2223 136 8 24 chr5 145073228 145073597 -58011935 - THE1B LTR MaLR -1 363 1 9035 114 29 25 chr5 145075566 145076958 -58008574 + THE1C-int LTR MaLR 184 1580 0 1687 163 70 20 chr5 145076958 145077315 -58008217 + THE1C LTR MaLR 1 375 0 330 317 123 33 chr5 145077318 145077520 -58008012 + L1M1 LINE L1 4939 5168 -2397 1724 160 7 52 chr5 145077520 145077827 -58007705 - AluJb SINE Alu -18 294 2 330 317 123 33 chr5 145077827 145077867 -58007665 + L1M1 LINE L1 5168 5203 -2362 292 226 43 9 chr5 145078351 145078466 -58007066 + (TA)n Simple_repeat Simple_repeat 2 120 0 235 308 9 0 chr5 145078634 145078741 -58006791 + L1ME4a LINE L1 5684 5791 -330 3765 104 13 63 chr5 145078880 145079514 -58006018 + LTR43 LTR ERV1 1 602 0 271 261 51 38 chr5 145079848 145080005 -58005527 + L1ME4a LINE L1 5961 6119 -2 261 0 0 0 chr5 145080430 145080459 -58005073 + (TC)n Simple_repeat Simple_repeat 1 29 0 1132 169 4 0 chr5 145082396 145082621 -58002911 - L1MA4 LINE L1 -6 6294 6069 422 355 20 7 chr5 145083271 145083423 -58002109 + MIR SINE MIR 2 155 -107 666 329 53 29 chr5 145083631 145084005 -58001527 + L2 LINE L2 1384 1766 -1548 1010 302 72 59 chr5 145084152 145084213 -58001319 + L2 LINE L2 1740 1799 -1515 2085 161 51 33 chr5 145084213 145084704 -58000828 + L1MA7 LINE L1 5792 6291 0 1010 302 72 59 chr5 145084704 145085271 -58000261 + L2 LINE L2 1799 2376 -938 498 325 30 30 chr5 145085275 145085546 -57999986 + L2 LINE L2 2269 2539 -775 1745 188 86 0 chr5 145086298 145086634 -57998898 - MLT1A1 LTR MaLR 0 365 1 527 115 26 44 chr5 145086892 145087005 -57998527 + L1MA9 LINE L1 6058 6168 -144 22 0 0 0 chr5 145087045 145087067 -57998465 + AT_rich Low_complexity Low_complexity 1 22 0 1938 139 0 4 chr5 145087276 145087586 -57997946 - AluSx SINE Alu 0 311 3 300 349 31 26 chr5 145087609 145087804 -57997728 + HAL1b LINE L1 295 490 -858 39975 40 22 1 chr5 145087806 145093850 -57991682 + L1PA3 LINE L1 4 6173 0 225 247 34 11 chr5 145093850 145093939 -57991593 + HAL1b LINE L1 491 581 -767 334 212 224 12 chr5 145094283 145094368 -57991164 + MER5C DNA MER1_type 7 109 -215 319 195 126 11 chr5 145094418 145094505 -57991027 + MER5C DNA MER1_type 228 324 0 246 143 0 0 chr5 145094689 145094738 -57990794 + (TG)n Simple_repeat Simple_repeat 2 50 0 2380 77 3 0 chr5 145094856 145095154 -57990378 - AluY SINE Alu -12 299 1 429 240 119 0 chr5 145095741 145095868 -57989664 - MIR SINE MIR -62 146 59 2634 101 5 11 chr5 145096013 145096390 -57989142 - THE1C LTR MaLR 0 375 1 10140 119 50 6 chr5 145096390 145097903 -57987629 - THE1C-int LTR MaLR 0 1580 1 2553 111 5 13 chr5 145097903 145098281 -57987251 - THE1C LTR MaLR 0 375 1 309 314 130 34 chr5 145098645 145098852 -57986680 + MIR SINE MIR 20 246 -16 207 0 0 0 chr5 145100411 145100434 -57985098 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1739 152 75 6 chr5 145100477 145100799 -57984733 + MER2 DNA MER2_type 1 344 0 2207 132 122 62 chr5 145101363 145101847 -57983685 - MER67D LTR ERV1 -1 513 1 6301 81 12 7 chr5 145102045 145103750 -57981782 - L1PA13 LINE L1 -4 6159 4433 1945 104 31 7 chr5 145103955 145104244 -57981288 + AluSq SINE Alu 3 298 -15 808 162 42 0 chr5 145104472 145104614 -57980918 + AluJb SINE Alu 147 294 -18 735 185 123 0 chr5 145104874 145105020 -57980512 - AluSg/x SINE Alu -13 297 134 4083 138 58 4 chr5 145105128 145105924 -57979608 - Tigger1 DNA MER2_type -1579 839 1 795 157 34 0 chr5 145105961 145106108 -57979424 - AluSg/x SINE Alu -26 284 133 269 311 100 33 chr5 145107049 145107186 -57978346 - MER91A DNA MER1_type -4 192 39 1696 162 17 0 chr5 145107186 145107482 -57978050 + AluSx SINE Alu 1 301 -11 269 311 100 33 chr5 145107482 145107524 -57978008 - MER91A DNA MER1_type -157 39 1 462 272 63 64 chr5 145110500 145110567 -57974965 + L1ME3 LINE L1 940 1006 -5390 762 87 71 0 chr5 145110567 145110693 -57974839 + L1PB1 LINE L1 6014 6148 -3 462 272 63 64 chr5 145110693 145111250 -57974282 + L1ME3 LINE L1 1006 1565 -4831 632 101 84 17 chr5 145111250 145111369 -57974163 - L1PA15 LINE L1 -1 6164 6038 462 272 63 64 chr5 145111369 145111597 -57973935 + L1ME3 LINE L1 1565 1792 -4604 2095 114 16 0 chr5 145111933 145112239 -57973293 + AluY SINE Alu 1 311 0 878 248 109 24 chr5 145112250 145112791 -57972741 + L1ME3 LINE L1 2241 2827 -3388 747 254 86 12 chr5 145112806 145113290 -57972242 + L1ME3 LINE L1 5012 5599 -636 1073 254 108 4 chr5 145113510 145113983 -57971549 + L1ME3 LINE L1 5688 6209 -22 384 220 130 0 chr5 145114424 145114524 -57971008 - MIR SINE MIR -65 197 85 2387 103 24 11 chr5 145114691 145115061 -57970471 - THE1C LTR MaLR 0 375 1 9071 120 72 6 chr5 145115061 145116543 -57968989 - THE1C-int LTR MaLR -1 1579 1 2411 105 22 11 chr5 145116543 145116914 -57968618 - THE1C LTR MaLR 0 375 1 225 183 85 49 chr5 145117391 145117473 -57968059 + MIR SINE MIR 162 246 -16 207 0 0 0 chr5 145119000 145119023 -57966509 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1271 135 81 8 chr5 145119079 145119339 -57966193 + MER2 DNA MER2_type 21 299 -46 1893 139 141 59 chr5 145119933 145120407 -57965125 - MER67D LTR ERV1 -1 513 1 5780 154 32 8 chr5 145120601 145122530 -57963002 - L1PA13 LINE L1 -4 6159 4168 1596 165 21 0 chr5 145122686 145122965 -57962567 - AluSx SINE Alu -27 285 1 330 348 85 73 chr5 145125597 145125856 -57959676 - L2 LINE L2 -19 3253 2992 776 190 76 69 chr5 145126188 145126477 -57959055 + Charlie4 DNA MER1_type 1 291 -1670 1546 177 70 12 chr5 145126823 145127168 -57958364 - MLT1A1 LTR MaLR 0 365 1 273 205 113 86 chr5 145127208 145127359 -57958173 + Charlie4 DNA MER1_type 1803 1957 -4 1381 221 176 45 chr5 145127589 145128241 -57957291 - L1ME3A LINE L1 -8 6162 5425 530 331 78 63 chr5 145128469 145129147 -57956385 - L2 LINE L2 -89 3183 2450 1947 116 50 58 chr5 145129480 145129666 -57955866 + L1PB3 LINE L1 5692 5878 -276 7666 89 31 6 chr5 145129666 145130958 -57954574 - L1PA8 LINE L1 -4 6168 4812 7557 70 23 8 chr5 145130958 145132013 -57953519 + MER11C LTR ERVK 1 1071 0 7666 89 31 6 chr5 145132013 145132709 -57952823 - L1PA8 LINE L1 -1360 4812 4135 1597 131 55 0 chr5 145132709 145132980 -57952552 + L1PB3 LINE L1 5858 6147 -7 1947 116 50 58 chr5 145132709 145132920 -57952612 + L1PB3 LINE L1 5878 6086 -68 721 285 53 8 chr5 145133627 145133873 -57951659 + MIR SINE MIR 5 261 -1 1878 191 22 54 chr5 145133983 145134487 -57951045 - MSTD-int LTR MaLR -1241 494 7 1808 155 17 3 chr5 145134487 145134778 -57950754 - AluSx SINE Alu -17 295 1 1372 212 120 14 chr5 145134787 145135145 -57950387 - MSTD LTR MaLR 0 396 1 471 189 21 0 chr5 145135389 145135484 -57950048 + MER47A DNA MER2_type 16 112 -254 294 308 93 29 chr5 145135484 145135656 -57949876 - L2 LINE L2 -2907 407 225 1761 151 25 22 chr5 145135863 145136227 -57949305 - MER47A DNA MER2_type 0 366 2 253 257 14 0 chr5 145137583 145137653 -57947879 + (TA)n Simple_repeat Simple_repeat 1 71 0 268 278 64 32 chr5 145139760 145139947 -57945585 - L1MC/D LINE L1 -2331 5477 5285 374 292 54 22 chr5 145139957 145140234 -57945298 + L1ME LINE L1 5494 5779 -342 1397 178 125 9 chr5 145140452 145140773 -57944759 - MLT1A1 LTR MaLR -7 358 1 330 294 190 34 chr5 145140791 145141206 -57944326 - L1MC/D LINE L1 -872 5274 4795 544 270 16 0 chr5 145141521 145141647 -57943885 - MIR SINE MIR -123 139 12 1741 132 46 0 chr5 145142655 145142935 -57942597 - AluSx SINE Alu -19 293 1 218 343 162 0 chr5 145143160 145143259 -57942273 - MIR SINE MIR -55 153 39 189 0 0 0 chr5 145144401 145144422 -57941110 + (T)n Simple_repeat Simple_repeat 1 21 0 225 296 167 19 chr5 145146967 145147075 -57938457 + MIR SINE MIR 25 148 -114 205 239 0 75 chr5 145147574 145147641 -57937891 + MIR SINE MIR 201 262 0 293 269 135 10 chr5 145148093 145148197 -57937335 + MER5B DNA MER1_type 36 152 -26 483 313 63 19 chr5 145148214 145148530 -57937002 + MLT1J LTR MaLR 8 337 -174 284 68 0 23 chr5 145148977 145149021 -57936511 + (TC)n Simple_repeat Simple_repeat 2 44 0 201 74 0 0 chr5 145150465 145150492 -57935040 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 184 365 60 36 chr5 145150960 145151127 -57934405 + MIR3 SINE MIR 24 194 -14 1887 148 59 8 chr5 145151611 145151968 -57933564 - THE1C LTR MaLR 0 375 1 8211 123 74 8 chr5 145151968 145153450 -57932082 - THE1C-int LTR MaLR 0 1580 1 1583 145 94 34 chr5 145153451 145153803 -57931729 - THE1C LTR MaLR -2 373 1 740 274 48 37 chr5 145154556 145154910 -57930622 - MER68 LTR ERV1 -19 543 186 24 32 0 0 chr5 145155170 145155201 -57930331 + AT_rich Low_complexity Low_complexity 1 31 0 464 291 132 18 chr5 145155607 145155827 -57929705 - MIR SINE MIR -16 246 2 315 0 0 0 chr5 145156251 145156286 -57929246 + (CA)n Simple_repeat Simple_repeat 2 36 0 2435 73 32 0 chr5 145156973 145157316 -57928216 - THE1A LTR MaLR -1 354 1 2114 112 17 0 chr5 145157959 145158255 -57927277 + AluSx SINE Alu 4 304 -8 240 250 44 0 chr5 145158659 145158727 -57926805 - MIR SINE MIR 0 262 192 1033 289 60 50 chr5 145158743 145159376 -57926156 + L1M3d LINE L1 417 1090 -5213 1495 226 99 4 chr5 145159723 145160430 -57925102 + L1M3d LINE L1 1009 1787 -4516 1083 154 14 14 chr5 145160424 145160644 -57924888 + L1MB1 LINE L1 5676 5895 -273 * 9903 35 21 0 chr5 145160644 145162687 -57922845 + L1PA3 LINE L1 4070 6155 0 21 0 0 0 chr5 145163772 145163793 -57921739 + AT_rich Low_complexity Low_complexity 1 21 0 329 309 74 40 chr5 145163793 145163968 -57921564 + MIR3 SINE MIR 19 199 -9 564 203 113 123 chr5 145164184 145164663 -57920869 + MLT1G LTR MaLR 3 476 -66 277 242 91 10 chr5 145164826 145164925 -57920607 + L1MC/D LINE L1 5696 5802 -2006 34 65 0 0 chr5 145164988 145165050 -57920482 + AT_rich Low_complexity Low_complexity 1 62 0 392 310 54 20 chr5 145165089 145165182 -57920350 - L2 LINE L2 -158 3155 3067 1996 124 66 20 chr5 145165182 145165530 -57920002 + THE1B LTR MaLR 1 364 0 10915 82 28 8 chr5 145165530 145167080 -57918452 + THE1B-int LTR MaLR 1 1580 0 1805 117 74 37 chr5 145167080 145167431 -57918101 + THE1B LTR MaLR 1 364 0 392 310 54 20 chr5 145167431 145167538 -57917994 - L2 LINE L2 -245 3068 2946 29 0 0 0 chr5 145167614 145167643 -57917889 + AT_rich Low_complexity Low_complexity 1 29 0 2083 179 184 18 chr5 145168692 145169351 -57916181 - MER63C DNA MER1_type -79 851 84 973 171 71 108 chr5 145170087 145170466 -57915066 - MLT1A1 LTR MaLR 0 365 1 1881 123 25 0 chr5 145170602 145170886 -57914646 + AluSx SINE Alu 5 295 -17 1548 164 113 8 chr5 145170896 145170945 -57914587 - MLT2D LTR ERVL 0 414 372 243 88 0 0 chr5 145170945 145170979 -57914553 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 1548 164 113 8 chr5 145170979 145171302 -57914230 - MLT2D LTR ERVL -42 372 3 458 222 32 0 chr5 145172551 145172677 -57912855 + LTR16A1 LTR ERVL 299 428 -29 212 292 113 54 chr5 145172915 145173083 -57912449 + MIR SINE MIR 21 198 -64 502 297 188 19 chr5 145173416 145173736 -57911796 - L2 LINE L2 -132 3181 2808 1316 186 114 10 chr5 145176127 145176434 -57909098 + MER2 DNA MER2_type 1 339 -6 243 0 0 0 chr5 145176439 145176466 -57909066 + (TG)n Simple_repeat Simple_repeat 2 28 0 363 292 90 21 chr5 145176711 145176855 -57908677 + L2 LINE L2 2900 3053 -219 362 240 116 41 chr5 145176874 145177020 -57908512 + LTR50 LTR ERVL 32 188 -607 2237 62 23 0 chr5 145177225 145177529 -57908003 - AluY SINE Alu 0 311 1 221 0 35 0 chr5 145178044 145178073 -57907459 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1881 107 17 24 chr5 145178696 145178986 -57906546 - AluSq SINE Alu -25 288 1 419 367 51 20 chr5 145179630 145179886 -57905646 - L2 LINE L2 -252 3020 2758 1539 302 92 32 chr5 145180026 145180401 -57905131 - L2 LINE L2 -101 3212 2861 1846 122 56 0 chr5 145180401 145180688 -57904844 + AluSx SINE Alu 1 303 -9 1539 302 92 32 chr5 145180688 145181375 -57904157 - L2 LINE L2 -452 2861 2035 9610 110 24 34 chr5 145181383 145183156 -57902376 + L1P LINE L1 658 2411 -3735 4976 53 20 29 chr5 145183155 145183852 -57901680 + L1PA6 LINE L1 5457 6152 -2 * 2221 182 90 12 chr5 145183856 145184460 -57901072 + L1PA15-16 LINE L1 1741 2377 -4049 2715 86 21 0 chr5 145184570 145184989 -57900543 + L1PA6 LINE L1 4858 5285 -861 41072 43 15 1 chr5 145184990 145191055 -57894477 + L1PA3 LINE L1 13 6166 0 6798 55 8 2 chr5 145191055 145191928 -57893604 + L1PA6 LINE L1 5275 6152 -2 2100 231 85 18 chr5 145191990 145192789 -57892743 + L1ME LINE L1 4635 5483 -683 5843 21 0 1 chr5 145192794 145193466 -57892066 - L1PA3 LINE L1 -127 6028 5358 1033 40 0 0 chr5 145193466 145193586 -57891946 + L1PA3 LINE L1 6030 6155 0 262 318 0 11 chr5 145193590 145193678 -57891854 + GA-rich Low_complexity Low_complexity 2 88 0 490 257 0 0 chr5 145193679 145193784 -57891748 + L1ME LINE L1 5479 5583 -583 1434 265 106 5 chr5 145193831 145194273 -57891259 - L2 LINE L2 -1560 1754 1268 303 122 0 0 chr5 145196108 145196157 -57889375 + (CA)n Simple_repeat Simple_repeat 2 50 0 2291 99 0 0 chr5 145197150 145197442 -57888090 - AluSx SINE Alu -20 292 1 3201 213 73 32 chr5 145197654 145198252 -57887280 + L1MDb LINE L1 574 1216 -5190 1661 88 88 4 chr5 145198252 145198490 -57887042 - AluY SINE Alu -4 307 50 3201 213 73 32 chr5 145198490 145198870 -57886662 + L1MDb LINE L1 1216 1579 -4827 515 267 0 0 chr5 145198872 145199003 -57886529 + L1MDb LINE L1 2450 2580 -4007 14874 186 38 15 chr5 145199004 145202241 -57883291 + L1MA4 LINE L1 4 3458 -3024 3923 103 43 2 chr5 145202241 145202816 -57882716 - L1PA13 LINE L1 -11 6152 5554 14874 186 38 15 chr5 145202816 145205622 -57879910 + L1MA4 LINE L1 3458 6198 -284 3712 73 4 0 chr5 145205678 145206160 -57879372 + L1PA7 LINE L1 5666 6149 -5 1008 123 0 0 chr5 145206160 145206314 -57879218 + L1P LINE L1 3734 3887 -2259 23 33 0 0 chr5 145206359 145206389 -57879143 + AT_rich Low_complexity Low_complexity 1 30 0 2677 17 0 0 chr5 145206434 145206729 -57878803 + AluY SINE Alu 1 295 -16 760 315 82 19 chr5 145206750 145207275 -57878257 - L2 LINE L2 -129 3184 2633 1480 182 40 7 chr5 145207903 145208178 -57877354 + AluJo SINE Alu 3 286 -26 22 35 0 0 chr5 145208178 145208207 -57877325 + AT_rich Low_complexity Low_complexity 1 29 0 327 301 102 36 chr5 145208752 145208918 -57876614 + HAL1 LINE L1 2 178 -2329 2220 265 95 57 chr5 145209147 145210306 -57875226 + HAL1 LINE L1 532 1734 -773 1539 174 132 36 chr5 145210307 145210670 -57874862 - MLT1D LTR MaLR 0 505 108 6262 122 8 7 chr5 145210678 145211604 -57873928 + L1PA8A LINE L1 32 958 -4917 2120 99 0 27 chr5 145211607 145211899 -57873633 + AluY SINE Alu 4 287 -24 566 151 0 0 chr5 145211913 145211999 -57873533 + L1PA6 LINE L1 11 96 -6050 29252 68 60 14 chr5 145211999 145217069 -57868463 + L1PA6 LINE L1 847 6154 0 26189 139 8 14 chr5 145217074 145222555 -57862977 + L1PA8A LINE L1 987 6475 -6 623 170 9 9 chr5 145222930 145223036 -57862496 - MLT1D LTR MaLR -399 106 1 1468 269 50 25 chr5 145223136 145223489 -57862043 + HAL1 LINE L1 1852 2230 -277 1548 148 122 4 chr5 145223489 145223752 -57861780 + AluJb SINE Alu 3 296 -16 1468 269 50 25 chr5 145223752 145224038 -57861494 + HAL1 LINE L1 2230 2507 0 501 266 53 86 chr5 145224322 145224517 -57861015 + L2 LINE L2 3008 3191 -122 2044 147 21 15 chr5 145224517 145224851 -57860681 + MER1B DNA MER1_type 1 336 -1 501 266 53 86 chr5 145224851 145224956 -57860576 + L2 LINE L2 3191 3298 -15 499 262 73 6 chr5 145225078 145225242 -57860290 + MIR SINE MIR 12 186 -76 266 372 124 0 chr5 145226595 145226732 -57858800 - L2 LINE L2 0 3272 3119 4193 186 103 74 chr5 145227000 145227728 -57857804 + Charlie6 DNA MER1_type 204 909 -2591 739 118 18 0 chr5 145227728 145227838 -57857694 - L1MA2 LINE L1 0 6304 6193 4193 186 103 74 chr5 145227838 145228110 -57857422 + Charlie6 DNA MER1_type 909 1171 -2329 1957 147 0 0 chr5 145228110 145228403 -57857129 + AluSx SINE Alu 1 293 -19 4193 186 103 74 chr5 145228403 145228546 -57856986 + Charlie6 DNA MER1_type 1171 1387 -2113 670 169 32 0 chr5 145228546 145228670 -57856862 + L1MB7 LINE L1 6041 6168 -16 4193 186 103 74 chr5 145228670 145228706 -57856826 + Charlie6 DNA MER1_type 1387 1420 -2080 2117 187 50 4 chr5 145229105 145229543 -57855989 + MLT2B1 LTR ERVL 2 518 -2 281 247 96 48 chr5 145230358 145230504 -57855028 - L1ME LINE L1 -5907 163 11 556 314 27 27 chr5 145231089 145231312 -57854220 + MIR SINE MIR 40 262 0 27 0 0 0 chr5 145232863 145232890 -57852642 + AT_rich Low_complexity Low_complexity 1 27 0 2520 60 3 0 chr5 145233418 145233719 -57851813 - AluY SINE Alu -9 302 1 732 208 0 0 chr5 145233776 145233901 -57851631 - FLAM_C SINE Alu -18 125 1 1001 227 0 25 chr5 145234041 145234318 -57851214 + L1M3 LINE L1 4657 4926 -1220 1225 204 86 35 chr5 145234325 145234895 -57850637 + L1M3 LINE L1 4975 5583 -588 2015 142 17 0 chr5 145234896 145235198 -57850334 + AluSx SINE Alu 2 308 -4 6394 202 13 16 chr5 145235252 145236819 -57848713 + L1 LINE L1 3091 4653 -1493 3299 198 15 24 chr5 145236793 145237502 -57848030 + L1 LINE L1 4252 4953 -1193 * 1868 127 69 0 chr5 145237502 145237778 -57847754 + AluSc SINE Alu 1 295 -14 3299 198 15 24 chr5 145237778 145237944 -57847588 + L1 LINE L1 4953 5119 -1027 * 5084 161 9 6 chr5 145237942 145238929 -57846603 - L1 LINE L1 -1179 4967 3978 3268 136 34 0 chr5 145239816 145239932 -57845600 - MER41C LTR ERV1 0 554 443 2285 105 3 0 chr5 145239932 145240236 -57845296 + AluSx SINE Alu 1 305 -7 3268 136 34 0 chr5 145240236 145240655 -57844877 - MER41C LTR ERV1 -111 443 1 906 234 73 37 chr5 145240894 145241167 -57844365 + LTR40b LTR ERVL 1 283 -179 2726 219 39 20 chr5 145242054 145242744 -57842788 - MER21B LTR ERV1 -149 714 12 10015 164 35 46 chr5 145243126 145244478 -57841054 - L1PA14 LINE L1 0 6161 4796 1735 162 40 30 chr5 145244478 145244849 -57840683 + THE1C LTR MaLR 1 375 0 9728 122 19 46 chr5 145244852 145246153 -57839379 + THE1C-int LTR MaLR 4 1254 -326 2405 99 0 3 chr5 145246153 145246465 -57839067 + AluSq SINE Alu 1 311 -2 9728 122 19 46 chr5 145246465 145246784 -57838748 + THE1C-int LTR MaLR 1254 1580 0 1836 128 57 38 chr5 145246784 145247152 -57838380 + THE1C LTR MaLR 1 375 0 10015 164 35 46 chr5 145247152 145248748 -57836784 - L1PA14 LINE L1 -1365 4796 3229 6242 29 0 17 chr5 145248756 145249515 -57836017 - L1PA4 LINE L1 0 6155 5410 2064 187 7 2 chr5 145249521 145249982 -57835550 - L1PA14 LINE L1 -2932 3214 2752 194 267 0 0 chr5 145250470 145250515 -57835017 - MIR SINE MIR -114 94 50 331 339 40 16 chr5 145250938 145251062 -57834470 - L2 LINE L2 -243 3029 2903 22 0 0 0 chr5 145251532 145251554 -57833978 + AT_rich Low_complexity Low_complexity 1 22 0 247 196 22 0 chr5 145252301 145252347 -57833185 + L2 LINE L2 3220 3266 -6 2026 189 67 17 chr5 145252516 145252997 -57832535 + MLT1D LTR MaLR 1 505 0 473 291 42 42 chr5 145253096 145253333 -57832199 - L2 LINE L2 -366 2948 2712 1020 167 0 17 chr5 145253333 145253507 -57832025 - AluJo SINE Alu -21 291 121 782 292 133 13 chr5 145253507 145253890 -57831642 - L2 LINE L2 -614 2700 2272 2615 53 3 0 chr5 145255527 145255847 -57829685 - L1PA7 LINE L1 -11 6143 5823 1477 215 16 58 chr5 145256021 145256398 -57829134 + MLT1A1 LTR MaLR 3 363 -2 627 259 96 70 chr5 145256579 145256977 -57828555 + MLT1L LTR MaLR 206 613 -2 425 299 87 27 chr5 145257320 145257643 -57827889 - HAL1 LINE L1 -2102 405 23 2061 115 49 0 chr5 145257801 145258088 -57827444 + AluSp SINE Alu 1 301 -12 424 134 0 0 chr5 145258215 145258282 -57827250 - MSTB LTR MaLR -4 428 362 2387 96 0 3 chr5 145258282 145258594 -57826938 + AluSq SINE Alu 1 311 -2 879 124 12 6 chr5 145258600 145258769 -57826763 + (GGAA)n Simple_repeat Simple_repeat 4 173 0 2017 187 19 0 chr5 145258769 145259132 -57826400 - MSTB LTR MaLR -56 370 1 377 273 9 45 chr5 145259409 145259519 -57826013 - L2 LINE L2 0 3272 3167 424 237 136 0 chr5 145260034 145260152 -57825380 - MER5A DNA MER1_type -6 183 50 1031 144 14 0 chr5 145260153 145260299 -57825233 + AluJo SINE Alu 1 148 -164 211 275 0 0 chr5 145260307 145260347 -57825185 - MER5A DNA MER1_type -149 40 1 275 292 13 3 chr5 145260370 145260464 -57825068 - MER5A DNA MER1_type -79 110 6 266 287 52 52 chr5 145260606 145260878 -57824654 - L1MEd LINE L1 -5146 973 702 294 182 0 0 chr5 145260879 145260945 -57824587 + (TG)n Simple_repeat Simple_repeat 2 67 0 553 301 145 39 chr5 145260965 145261587 -57823945 - L1MEd LINE L1 -5427 692 5 1599 191 39 116 chr5 145262777 145263767 -57821765 - L1MC3 LINE L1 -502 5664 5279 682 128 9 18 chr5 145263771 145263880 -57821652 - AluJb SINE Alu -15 297 190 325 285 113 20 chr5 145264329 145264480 -57821052 - MLT1J2 LTR MaLR -22 428 264 23 54 0 0 chr5 145264848 145264885 -57820647 + AT_rich Low_complexity Low_complexity 1 37 0 616 138 114 0 chr5 145265190 145265313 -57820219 + L1MA5 LINE L1 6143 6279 -21 2660 98 16 0 chr5 145265315 145265684 -57819848 - THE1C LTR MaLR 0 375 1 8900 126 39 14 chr5 145265684 145267132 -57818400 - THE1C-int LTR MaLR 0 1580 97 445 119 0 0 chr5 145267132 145267199 -57818333 - THE1C-int LTR MaLR -1427 153 87 2115 207 10 31 chr5 145267204 145267756 -57817776 + LTR27 LTR ERV1 7 1253 -130 516 231 7 34 chr5 145267772 145267919 -57817613 + LTR27 LTR ERV1 494 636 0 528 116 0 12 chr5 145267923 145268009 -57817523 - THE1C-int LTR MaLR -1564 87 3 2556 111 14 3 chr5 145268011 145268382 -57817150 - THE1C LTR MaLR 0 375 1 419 332 83 25 chr5 145268660 145269175 -57816357 + L1M4 LINE L1 2 546 -5996 4281 110 32 17 chr5 145269826 145269872 -57815660 - L1MA5A LINE L1 -5 6292 6248 1730 181 3 26 chr5 145269872 145270181 -57815351 - AluJo SINE Alu -9 303 2 4281 110 32 17 chr5 145270181 145270844 -57814688 - L1MA5A LINE L1 -49 6248 5572 294 364 0 0 chr5 145272268 145272367 -57813165 + MIR SINE MIR 152 250 -12 278 229 57 0 chr5 145272385 145272455 -57813077 + MIR SINE MIR 81 154 -108 2289 70 3 17 chr5 145273078 145273379 -57812153 + AluY SINE Alu 1 297 -14 2103 96 0 0 chr5 145273701 145273972 -57811560 + AluSx SINE Alu 1 271 -41 299 299 8 87 chr5 145274247 145274374 -57811158 + MIR SINE MIR 25 141 -67 960 180 11 32 chr5 145276899 145277088 -57808444 + AluJb SINE Alu 128 312 0 2277 103 0 7 chr5 145277381 145277683 -57807849 - AluSg SINE Alu -10 300 1 768 112 0 0 chr5 145278600 145278716 -57806816 - L1MB8 LINE L1 0 6178 6063 21 0 0 0 chr5 145279049 145279070 -57806462 + AT_rich Low_complexity Low_complexity 1 21 0 311 272 19 19 chr5 145282544 145282647 -57802885 - LTR33 LTR ERVL -115 406 304 518 272 31 15 chr5 145282714 145282909 -57802623 - LTR33 LTR ERVL -323 198 1 448 275 181 0 chr5 145282917 145283077 -57802455 - MIR SINE MIR -71 191 3 2895 13 0 0 chr5 145283234 145283550 -57801982 - AluYb8 SINE Alu -2 316 1 1792 210 74 22 chr5 145284799 145285204 -57800328 - MLT1D LTR MaLR -78 427 2 226 136 0 198 chr5 145285401 145285482 -57800050 + Charlie5 DNA MER1_type 2559 2623 0 579 215 245 0 chr5 145286606 145286769 -57798763 - MLT2B1 LTR ERVL -90 430 228 277 280 44 66 chr5 145287493 145287675 -57797857 + MLT1G LTR MaLR 413 590 0 461 101 90 0 chr5 145289266 145289355 -57796177 - L1MA8 LINE L1 -5 6286 6190 32 26 0 0 chr5 145289443 145289482 -57796050 + AT_rich Low_complexity Low_complexity 1 39 0 2753 145 13 4 chr5 145289531 145290346 -57795186 + L1MA3 LINE L1 22 924 -6641 5642 110 24 18 chr5 145290348 145291384 -57794148 + L1PB2 LINE L1 5107 6150 -1 * 13341 127 19 5 chr5 145291381 145293435 -57792097 + L1MA3 LINE L1 912 2994 -4571 1447 58 0 0 chr5 145293435 145293609 -57791923 + AluY SINE Alu 136 309 -2 3454 116 25 35 chr5 145293609 145294247 -57791285 + L1MA3 LINE L1 2979 3610 -3955 14383 168 26 19 chr5 145295511 145298328 -57787204 + L1MA3 LINE L1 3595 6446 -1278 1934 157 7 0 chr5 145298328 145298621 -57786911 + AluSx SINE Alu 1 295 -17 14383 168 26 19 chr5 145298621 145299907 -57785625 + L1MA3 LINE L1 6446 7723 -1 2367 110 3 3 chr5 145300024 145300380 -57785152 - L1PB1 LINE L1 0 6867 6512 447 19 0 0 chr5 145300382 145300434 -57785098 + (TG)n Simple_repeat Simple_repeat 1 52 0 201 182 13 26 chr5 145300444 145300521 -57785011 + (TA)n Simple_repeat Simple_repeat 2 77 0 10984 201 62 9 chr5 145300524 145305470 -57780062 - L1PB1 LINE L1 -357 6510 1093 4324 203 62 14 chr5 145305473 145306466 -57779066 - L1PB1 LINE L1 -5817 1046 6 357 304 76 22 chr5 145306504 145306688 -57778844 + L1MC/D LINE L1 5155 5348 -798 225 83 0 0 chr5 145306689 145306725 -57778807 + (TC)n Simple_repeat Simple_repeat 1 36 0 336 335 69 0 chr5 145306768 145306956 -57778576 + L1MC/D LINE L1 5403 5603 -2205 2685 206 31 34 chr5 145306957 145307539 -57777993 + MER82 DNA MER2_type 1 580 -73 1195 284 155 6 chr5 145307731 145308221 -57777311 - L2 LINE L2 -1158 2156 1594 291 231 46 0 chr5 145309191 145309256 -57776276 + MER66B LTR ERV1 277 344 -142 791 294 99 53 chr5 145309997 145310483 -57775049 - MLT1J LTR MaLR -3 508 1 63 57 0 0 chr5 145310630 145310735 -57774797 + AT_rich Low_complexity Low_complexity 1 105 0 4813 129 16 11 chr5 145311177 145311930 -57773602 + Tigger2 DNA MER2_type 1 757 -1961 1364 123 63 48 chr5 145311986 145312238 -57773294 + Tigger2 DNA MER2_type 2463 2718 0 212 311 72 18 chr5 145312417 145312587 -57772945 - MIR SINE MIR -47 215 39 23 33 0 0 chr5 145313586 145313616 -57771916 + AT_rich Low_complexity Low_complexity 1 30 0 246 270 63 56 chr5 145313838 145313964 -57771568 - MIR SINE MIR -134 128 2 515 237 157 20 chr5 145314311 145314561 -57770971 + L1ME LINE L1 2067 2312 -3903 43084 48 3 1 chr5 145314579 145320714 -57764818 - L1PA4 LINE L1 -5 6150 2 2019 242 66 25 chr5 145320713 145321485 -57764047 + L1ME LINE L1 2309 3112 -3103 * 2284 92 0 3 chr5 145321488 145321781 -57763751 + AluSg SINE Alu 1 292 -18 826 156 66 24 chr5 145321944 145322111 -57763421 - MLT1A1 LTR MaLR -190 175 2 2902 217 75 50 chr5 145322111 145322486 -57763046 + L1ME LINE L1 4072 4436 -1797 1884 151 14 3 chr5 145322486 145322777 -57762755 + AluSx SINE Alu 1 294 -18 2902 217 75 50 chr5 145322777 145324122 -57761410 + L1ME LINE L1 4436 5839 -394 860 240 18 9 chr5 145324118 145324343 -57761189 + L1ME2 LINE L1 4147 4373 -1842 * 1048 230 114 26 chr5 145324344 145324424 -57761108 + L1ME2 LINE L1 5843 5915 -318 1981 158 0 13 chr5 145324424 145324728 -57760804 + AluSx SINE Alu 1 300 -12 1048 230 114 26 chr5 145324728 145324999 -57760533 + L1ME2 LINE L1 5915 6225 -8 874 184 0 6 chr5 145326186 145326344 -57759188 + MLT1A1 LTR MaLR 1 157 -208 4695 134 19 10 chr5 145326344 145327133 -57758399 + L1MA7 LINE L1 5467 6262 -29 1813 97 8 4 chr5 145327134 145327372 -57758160 + AluY SINE Alu 55 293 -18 1226 174 9 9 chr5 145327372 145327590 -57757942 + MLT1A1 LTR MaLR 148 365 0 2562 162 27 24 chr5 145328567 145329174 -57756358 + L1M4 LINE L1 5129 5746 -432 * 10490 117 25 8 chr5 145329169 145330897 -57754635 + L1PA8 LINE L1 2808 4565 -1581 864 73 0 0 chr5 145330897 145331006 -57754526 - THE1A LTR MaLR 0 355 247 356 65 0 0 chr5 145331035 145331081 -57754451 - THE1A LTR MaLR -309 46 1 11604 97 11 0 chr5 145331081 145332644 -57752888 - THE1A-int LTR MaLR 0 1580 1 2614 98 0 6 chr5 145332644 145333001 -57752531 - THE1A LTR MaLR 0 355 1 5975 98 25 15 chr5 145333001 145334108 -57751424 + L1PA8 LINE L1 4561 5702 -470 1961 138 3 3 chr5 145334108 145334405 -57751127 + AluSx SINE Alu 1 297 -15 5975 98 25 15 chr5 145334405 145334872 -57750660 + L1PA8 LINE L1 5702 6163 -9 1590 218 48 54 chr5 145335010 145335473 -57750059 + MLT1C LTR MaLR 8 467 0 15111 51 0 3 chr5 145335551 145338272 -57747260 + L1PA5 LINE L1 3458 6154 0 1632 192 0 21 chr5 145338369 145338656 -57746876 + AluJo SINE Alu 1 281 -31 1353 179 41 6 chr5 145338666 145339030 -57746502 + MER114 LTR ERV 15 391 -257 4819 232 91 27 chr5 145339033 145339082 -57746450 + L1MB3 LINE L1 5 49 -6595 384 35 18 0 chr5 145339082 145339139 -57746393 + L1PA3 LINE L1 6098 6155 0 4819 232 91 27 chr5 145339139 145339504 -57746028 + L1MB3 LINE L1 49 389 -6255 2075 146 22 11 chr5 145339504 145339866 -57745666 + MER47A DNA MER2_type 1 366 0 4819 232 91 27 chr5 145339866 145340085 -57745447 + L1MB3 LINE L1 389 593 -6051 2807 13 0 0 chr5 145340085 145340393 -57745139 + AluYa5 SINE Alu 1 308 -3 4819 232 91 27 chr5 145340393 145341871 -57743661 + L1MB3 LINE L1 593 1975 -4669 2277 120 22 33 chr5 145341871 145342239 -57743293 - THE1B LTR MaLR 0 364 1 1775 73 0 35 chr5 145342240 145342472 -57743060 + AluY SINE Alu 72 295 -16 4819 232 91 27 chr5 145342472 145343081 -57742451 + L1MB3 LINE L1 1975 2544 -4100 1789 164 38 26 chr5 145343081 145343423 -57742109 - MER7A DNA MER2_type 0 346 3 4819 232 91 27 chr5 145343423 145343870 -57741662 + L1MB3 LINE L1 2544 3393 -3251 554 219 92 37 chr5 145343870 145344034 -57741498 - MLT1A1 LTR MaLR 0 365 193 264 228 13 51 chr5 145344046 145344125 -57741407 - MLT1A1-int LTR MaLR -355 1016 941 2597 204 39 16 chr5 145344279 145344842 -57740690 - MLT1A1-int LTR MaLR -959 776 201 544 195 9 0 chr5 145345287 145345400 -57740132 + MER70B LTR ERVL 454 567 -11 757 151 199 5 chr5 145345415 145345601 -57739931 - MLT1A1-int LTR MaLR -1135 236 15 843 208 32 32 chr5 145345615 145345831 -57739701 - MLT1A1 LTR MaLR 0 365 150 3968 190 39 25 chr5 145345856 145346592 -57738940 + L1MA9 LINE L1 4851 5620 -692 1757 112 0 0 chr5 145346592 145346816 -57738716 + AluSx SINE Alu 44 267 -45 3968 190 39 25 chr5 145346816 145347479 -57738053 + L1MA9 LINE L1 5620 6272 -40 388 173 0 0 chr5 145347525 145347606 -57737926 + L1MB3 LINE L1 3823 3903 -2741 252 171 0 0 chr5 145347675 145347716 -57737816 - FAM SINE Alu -12 167 127 1178 175 10 10 chr5 145347716 145347916 -57737616 - AluJo SINE Alu -92 220 21 4773 149 35 30 chr5 145347916 145348304 -57737228 + L1MB3 LINE L1 5610 5995 -686 2023 137 3 22 chr5 145348304 145348619 -57736913 + AluSx SINE Alu 2 310 -2 4773 149 35 30 chr5 145348619 145349294 -57736238 + L1MB3 LINE L1 5995 6681 0 3177 142 30 17 chr5 145349294 145349866 -57735666 + L1MB3 LINE L1 6091 6674 -7 2423 296 53 30 chr5 145349910 145350963 -57734569 - HERV16 LTR ERVL -3773 1223 147 292 293 138 12 chr5 145351087 145351254 -57734278 - LTR16A LTR ERVL -5 445 258 1881 140 162 8 chr5 145351280 145351651 -57733881 + MSTA LTR MaLR 1 428 0 6362 170 27 9 chr5 145351651 145352813 -57732719 + MSTA-int LTR MaLR 1 1183 -468 640 197 148 0 chr5 145352825 145352967 -57732565 + MSTA LTR MaLR 266 428 0 594 313 40 4 chr5 145352973 145353200 -57732332 - LTR16A LTR ERVL -214 236 2 29 0 0 0 chr5 145353206 145353235 -57732297 + AT_rich Low_complexity Low_complexity 1 29 0 2249 69 45 7 chr5 145354482 145354770 -57730762 + AluY SINE Alu 1 299 -12 252 0 0 0 chr5 145354770 145354798 -57730734 + (TA)n Simple_repeat Simple_repeat 2 29 0 192 97 0 0 chr5 145354901 145354932 -57730600 + (TC)n Simple_repeat Simple_repeat 2 32 0 464 348 61 37 chr5 145355763 145356059 -57729473 + L1MDa LINE L1 34 336 -6204 1990 112 0 4 chr5 145356367 145356627 -57728905 + AluSx SINE Alu 16 274 -38 2529 46 0 13 chr5 145356785 145357088 -57728444 - AluY SINE Alu -12 299 1 1065 151 44 15 chr5 145357253 145357459 -57728073 + MER47A DNA MER2_type 1 212 -154 1510 129 16 8 chr5 145357489 145357744 -57727788 + Tigger5 DNA MER2_type 2066 2322 -1 298 302 41 6 chr5 145358134 145358303 -57727229 - L1MEd LINE L1 -3761 2368 2194 2118 124 3 0 chr5 145358759 145359049 -57726483 - AluSx SINE Alu -21 291 1 7991 9 0 0 chr5 145359066 145360147 -57725385 - L1PA2 LINE L1 0 6155 5075 3331 39 3 3 chr5 145360147 145360596 -57724936 + L1P LINE L1 4243 4694 -1452 679 262 136 20 chr5 145360739 145361299 -57724233 - L1MEd LINE L1 -4734 1576 907 1745 174 0 7 chr5 145361304 145361585 -57723947 + AluJb SINE Alu 1 279 -33 2707 145 14 0 chr5 145361729 145362149 -57723383 - MSTB LTR MaLR 0 426 1 266 311 38 19 chr5 145362253 145362359 -57723173 - L1MEd LINE L1 -5514 605 498 273 317 30 10 chr5 145362868 145362969 -57722563 - MIR3 SINE MIR -39 169 67 293 267 147 0 chr5 145364450 145364566 -57720966 + MER94 DNA DNA 2 134 0 293 229 44 91 chr5 145364758 145364878 -57720654 - MER5A DNA MER1_type 0 178 74 200 289 0 0 chr5 145364859 145364911 -57720621 - L2 LINE L2 -336 2977 2926 * 1115 214 66 13 chr5 145365173 145365491 -57720041 + L1MCa LINE L1 168 502 -6062 * 1138 201 124 63 chr5 145365490 145365933 -57719599 + L1MCa LINE L1 392 861 -5184 * 1682 163 4 14 chr5 145365933 145366210 -57719322 - AluJo SINE Alu -38 274 1 1996 162 120 18 chr5 145366210 145366737 -57718795 + L1MCa LINE L1 2069 2657 -3907 1942 173 0 6 chr5 145368563 145368875 -57716657 - AluJb SINE Alu -2 310 1 2832 181 20 18 chr5 145369524 145370132 -57715400 - L1MA8 LINE L1 -30 6261 5653 5407 165 44 23 chr5 145370136 145370697 -57714835 - L1M1 LINE L1 -4259 1069 672 249 57 0 0 chr5 145370697 145370732 -57714800 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5407 165 44 23 chr5 145370732 145371415 -57714117 - L1M1 LINE L1 -4656 672 5 2463 144 29 28 chr5 145371421 145372224 -57713308 - L1MA8 LINE L1 -626 5665 4862 338 113 42 42 chr5 145372224 145372295 -57713237 + HERV16 LTR ERVL 1153 1223 -3773 2085 151 21 24 chr5 145372332 145372757 -57712775 - L1MB3 LINE L1 -2 6181 5758 975 159 1 6 chr5 145372785 145372976 -57712556 - L1P2 LINE L1 -371 5783 5594 41819 41 2 1 chr5 145373012 145379015 -57706517 + L1PA4 LINE L1 1 6013 -142 1709 209 34 11 chr5 145379263 145379699 -57705833 + L1MB3 LINE L1 5722 6167 -16 1106 22 8 0 chr5 145379704 145379838 -57705694 - L1PA4 LINE L1 -3 6152 6018 7443 37 5 2 chr5 145380257 145381221 -57704311 - L1P LINE L1 -938 5208 4242 1046 30 0 0 chr5 145381220 145381355 -57704177 + L1P LINE L1 5075 5209 -937 * 264 264 75 38 chr5 145381512 145381618 -57703914 + MIR3 SINE MIR 79 188 -20 1677 184 9 14 chr5 145382849 145383196 -57702336 + MLT1A1 LTR MaLR 21 365 0 431 291 90 0 chr5 145383657 145383791 -57701741 - MIR SINE MIR -71 191 46 1208 137 16 0 chr5 145383982 145384164 -57701368 - AluSg/x SINE Alu -6 306 122 1850 155 4 7 chr5 145384365 145384642 -57700890 - AluJo SINE Alu -31 281 6 673 234 32 6 chr5 145384910 145385068 -57700464 - MIR SINE MIR -61 201 40 25 0 0 0 chr5 145385069 145385094 -57700438 + AT_rich Low_complexity Low_complexity 1 25 0 1782 143 29 32 chr5 145385099 145385407 -57700125 + AluJb SINE Alu 1 307 -5 329 318 74 85 chr5 145385817 145386100 -57699432 + L2 LINE L2 2966 3245 -27 269 315 161 0 chr5 145386098 145386247 -57699285 - MIR3 SINE MIR -3 205 33 * 793 207 49 0 chr5 145386295 145386459 -57699073 - MER5B DNA MER1_type -6 172 1 1142 22 0 0 chr5 145386968 145387103 -57698429 + L1PA4 LINE L1 6018 6152 -3 2971 185 36 5 chr5 145387108 145387740 -57697792 - L1MB3 LINE L1 -16 6167 5516 1155 156 21 11 chr5 145387752 145387938 -57697594 - AluJo SINE Alu -124 188 1 641 100 0 0 chr5 145387950 145388050 -57697482 - L1M4c LINE L1 -4479 1905 1806 5826 137 29 30 chr5 145388082 145389160 -57696372 - L1M4c LINE L1 -5288 1096 20 7091 57 30 0 chr5 145389203 145390171 -57695361 - L1PA8 LINE L1 -3 6169 5196 1843 169 23 7 chr5 145390171 145390478 -57695054 - AluJb SINE Alu 0 312 1 2233 187 38 24 chr5 145391157 145391655 -57693877 - MLT1D LTR MaLR 0 505 1 556 142 0 135 chr5 145391717 145391865 -57693667 + L1MB7 LINE L1 6039 6166 -18 236 149 21 0 chr5 145392405 145392452 -57693080 + GA-rich Low_complexity Low_complexity 5 52 0 198 0 0 0 chr5 145393034 145393056 -57692476 + (T)n Simple_repeat Simple_repeat 1 22 0 1140 201 23 0 chr5 145394043 145394257 -57691275 - MER20 DNA MER1_type 0 219 1 2104 116 0 3 chr5 145394486 145394780 -57690752 + AluSg SINE Alu 1 293 -17 1711 197 33 51 chr5 145395131 145395582 -57689950 - MER65A LTR ERV1 0 445 3 195 42 0 0 chr5 145395583 145395607 -57689925 + (TG)n Simple_repeat Simple_repeat 1 24 0 534 89 13 0 chr5 145395782 145395861 -57689671 + MER41A LTR ERV1 1 80 -474 941 98 8 0 chr5 145395861 145395984 -57689548 + AluSq SINE Alu 108 231 -82 436 193 11 0 chr5 145396303 145396391 -57689141 + MER70B LTR ERVL 479 567 -11 408 53 0 63 chr5 145396859 145396954 -57688578 + (TA)n Simple_repeat Simple_repeat 1 89 0 815 301 93 59 chr5 145396954 145397498 -57688034 + L2 LINE L2 2627 3206 -107 2404 97 3 0 chr5 145397498 145397807 -57687725 + AluSp SINE Alu 1 310 -3 815 301 93 59 chr5 145397807 145397919 -57687613 + L2 LINE L2 3206 3313 0 2292 99 7 0 chr5 145398759 145399053 -57686479 + AluSq SINE Alu 1 296 -17 4040 108 25 19 chr5 145400229 145400917 -57684615 + L1MA8 LINE L1 5594 6285 -6 275 329 131 40 chr5 145401038 145401442 -57684090 - L2 LINE L2 -657 2657 2217 1305 177 4 22 chr5 145402255 145402487 -57683045 - AluJo SINE Alu -84 228 1 1612 158 81 0 chr5 145402545 145402842 -57682690 - AluSx SINE Alu 0 318 1 2372 78 0 3 chr5 145403022 145403316 -57682216 - AluSc SINE Alu -16 293 1 216 97 0 0 chr5 145403777 145403808 -57681724 + (CA)n Simple_repeat Simple_repeat 2 32 0 366 284 152 34 chr5 145404309 145404513 -57681019 - MIR SINE MIR 0 262 35 264 83 60 36 chr5 145404995 145405079 -57680453 + T-rich Low_complexity Low_complexity 5 90 0 2168 103 7 0 chr5 145405453 145405743 -57679789 - AluSp SINE Alu -20 293 2 1711 171 24 0 chr5 145405767 145406059 -57679473 - AluSx SINE Alu -13 299 1 817 121 8 8 chr5 145406062 145406194 -57679338 - AluJo/FLAM SINE Alu -169 133 2 500 269 45 85 chr5 145406387 145406762 -57678770 + MER115 DNA AcHobo 248 607 -86 1920 141 3 46 chr5 145406902 145407228 -57678304 + AluSx SINE Alu 1 312 0 3948 161 31 9 chr5 145407228 145407962 -57677570 + L1MB7 LINE L1 5430 6179 -5 409 301 58 9 chr5 145408023 145408249 -57677283 + L1ME LINE L1 5556 5792 -329 274 130 93 0 chr5 145408287 145408341 -57677191 + L1PA16 LINE L1 6099 6157 -9 49 0 0 0 chr5 145408341 145408390 -57677142 + AT_rich Low_complexity Low_complexity 1 49 0 1506 205 3 62 chr5 145408704 145409026 -57676506 + AluJb SINE Alu 1 303 -9 2297 99 0 0 chr5 145409300 145409592 -57675940 - AluSx SINE Alu -20 292 1 21 0 0 0 chr5 145410256 145410277 -57675255 + AT_rich Low_complexity Low_complexity 1 21 0 33605 97 16 14 chr5 145410650 145414924 -57670608 - L1PA6 LINE L1 -2 6152 1863 2224 86 19 29 chr5 145414924 145415237 -57670295 + AluY SINE Alu 1 310 -1 33605 97 16 14 chr5 145415237 145417008 -57668524 - L1PA6 LINE L1 -4291 1863 98 4836 61 7 0 chr5 145417008 145418126 -57667406 + MER11A LTR ERVK 1 1266 0 613 129 0 0 chr5 145418126 145418219 -57667313 - L1PA6 LINE L1 -6043 103 11 2148 133 0 13 chr5 145418305 145418621 -57666911 - AluSx SINE Alu 0 312 1 6759 140 20 3 chr5 145418725 145419912 -57665620 + L1P LINE L1 3768 4974 -1172 2297 120 43 0 chr5 145419912 145420261 -57665271 + THE1B LTR MaLR 1 364 0 1077 90 0 0 chr5 145420261 145420416 -57665116 + THE1B-int LTR MaLR 1 155 -1425 999 137 0 6 chr5 145420406 145420574 -57664958 - L1P LINE L1 -2011 4135 3969 * 5119 108 1 1 chr5 145420581 145421331 -57664201 + THE1B-int LTR MaLR 160 909 -671 2246 41 0 38 chr5 145421325 145421642 -57663890 + L1P LINE L1 4376 4680 -1466 * 299 226 0 54 chr5 145421642 145421735 -57663797 + LTR30 LTR ERV1 527 614 -108 4135 59 28 0 chr5 145421771 145422346 -57663186 + L1PA5 LINE L1 4697 5287 -859 4786 61 0 0 chr5 145422349 145422953 -57662579 + L1PA5 LINE L1 5551 6154 0 6126 87 19 8 chr5 145422955 145423956 -57661576 + L1PA13 LINE L1 5151 6161 -2 467 217 17 0 chr5 145423959 145424079 -57661453 + (CATATA)n Simple_repeat Simple_repeat 5 126 0 2362 64 7 3 chr5 145424098 145424394 -57661138 - AluY SINE Alu -14 297 1 1749 160 24 10 chr5 145424421 145424715 -57660817 + AluJb SINE Alu 1 298 -14 609 162 32 52 chr5 145425929 145426048 -57659484 - MER63B DNA MER1_type -626 434 317 2169 119 3 0 chr5 145426048 145426343 -57659189 + AluSx SINE Alu 1 296 -16 609 162 32 52 chr5 145426343 145426377 -57659155 - MER63B DNA MER1_type -743 317 284 1859 134 9 3 chr5 145426381 145426702 -57658830 + L1MB3 LINE L1 5696 6018 -165 40520 48 6 1 chr5 145426715 145432799 -57652733 - L1PA4 LINE L1 -1 6154 35 869 128 0 47 chr5 145432800 145432972 -57652560 + L1MB2 LINE L1 6005 6168 -3 1573 152 59 35 chr5 145433054 145433344 -57652188 + AluJb SINE Alu 1 297 -15 253 257 20 50 chr5 145433376 145433407 -57652125 + L1MD1 LINE L1 6134 6164 -78 2399 128 43 25 chr5 145433407 145433844 -57651688 + MER65A LTR ERV1 1 445 0 253 257 20 50 chr5 145433844 145433913 -57651619 + L1MD1 LINE L1 6164 6231 -11 1151 211 56 8 chr5 145433917 145434183 -57651349 - MER63B DNA MER1_type -145 291 13 881 232 50 21 chr5 145434313 145434593 -57650939 + L1MC1 LINE L1 4573 4860 -1286 1862 213 10 16 chr5 145434618 145435106 -57650426 + L1MC1 LINE L1 4848 5332 -814 2408 100 0 0 chr5 145435106 145435415 -57650117 + AluSx SINE Alu 1 309 -3 2458 88 0 0 chr5 145435425 145435733 -57649799 + AluSx SINE Alu 1 308 -4 4883 139 27 12 chr5 145435741 145436601 -57648931 + L1MC1 LINE L1 5456 6328 -5 3619 134 37 18 chr5 145435982 145436609 -57648923 + L1MC1 LINE L1 5695 6333 0 1627 215 95 25 chr5 145436699 145437140 -57648392 + L1MB8 LINE L1 4640 5111 -1035 * 2052 137 72 48 chr5 145437138 145437554 -57647978 + L1MB8 LINE L1 5537 5962 -216 * 2056 73 51 0 chr5 145437552 145437826 -57647706 + L1PA7 LINE L1 5862 6149 -5 328 161 0 123 chr5 145437835 145437916 -57647616 + L1MB8 LINE L1 5955 6025 -153 * 2558 227 103 100 chr5 145437911 145438649 -57646883 - L1MC4 LINE L1 -95 7713 6979 6140 44 15 6 chr5 145438649 145439375 -57646157 + L1PA6 LINE L1 5420 6152 -2 2558 227 103 100 chr5 145439375 145439518 -57646014 - L1MC4 LINE L1 -829 6979 6838 1810 161 20 3 chr5 145439518 145439810 -57645722 - AluSx SINE Alu -15 297 1 2558 227 103 100 chr5 145439810 145440519 -57645013 - L1MC4 LINE L1 -970 6838 6155 2103 114 0 0 chr5 145440567 145440877 -57644655 + AluSx SINE Alu 14 323 0 1798 131 4 0 chr5 145441505 145441764 -57643768 - AluSq SINE Alu -53 260 1 1105 156 12 0 chr5 145441946 145442119 -57643413 + FRAM SINE Alu 1 174 -2 2345 102 3 0 chr5 145442387 145442691 -57642841 + AluSp SINE Alu 1 305 -8 932 271 75 67 chr5 145442728 145443089 -57642443 - LTR67 LTR ERVL -191 366 3 2183 116 0 0 chr5 145443155 145443449 -57642083 - AluSc SINE Alu -15 294 1 186 256 0 0 chr5 145443472 145443511 -57642021 + L2 LINE L2 3257 3295 -18 2182 109 0 34 chr5 145444006 145444328 -57641204 - AluSx SINE Alu -1 311 1 1109 251 152 18 chr5 145444589 145444865 -57640667 + MLT1H LTR MaLR 21 259 -290 3514 132 40 59 chr5 145444865 145445381 -57640151 + LTR35 LTR ERV1 1 504 -114 2438 61 16 26 chr5 145445381 145445694 -57639838 - AluSp SINE Alu -3 310 1 3514 132 40 59 chr5 145445694 145445806 -57639726 + LTR35 LTR ERV1 504 617 -1 1109 251 152 18 chr5 145445806 145445976 -57639556 + MLT1H LTR MaLR 259 527 -22 557 278 62 0 chr5 145446192 145446354 -57639178 + L2 LINE L2 2465 2636 -678 268 238 267 19 chr5 145446354 145446459 -57639073 + L1ME1 LINE L1 6027 6157 -9 1593 164 84 0 chr5 145446933 145447208 -57638324 + AluJb SINE Alu 1 298 -14 365 271 69 105 chr5 145447623 145447870 -57637662 + MLT1J LTR MaLR 156 387 -124 2849 7 0 0 chr5 145447870 145448175 -57637357 + AluY SINE Alu 1 305 -6 365 271 69 105 chr5 145448175 145448289 -57637243 + MLT1J LTR MaLR 387 504 -7 1700 143 9 70 chr5 145448310 145448625 -57636907 - AluJb SINE Alu -15 297 2 1969 121 16 46 chr5 145448830 145449136 -57636396 + AluSx SINE Alu 1 297 -15 649 289 186 25 chr5 145449379 145449701 -57635831 - MLT1J2 LTR MaLR -37 409 36 1298 196 92 19 chr5 145449719 145450036 -57635496 - MLT1F LTR MaLR -4 538 199 239 135 0 0 chr5 145450039 145450076 -57635456 - MLT1A1 LTR MaLR -3 371 335 1125 158 48 24 chr5 145450076 145450285 -57635247 + AluJb SINE Alu 86 299 -13 1960 161 18 9 chr5 145450285 145450615 -57634917 - MLT1A1 LTR MaLR -32 333 1 620 257 98 16 chr5 145450615 145450797 -57634735 - MLT1F LTR MaLR -345 197 1 2108 96 43 0 chr5 145451075 145451355 -57634177 + AluSp SINE Alu 1 292 -21 24 32 0 0 chr5 145451547 145451578 -57633954 + AT_rich Low_complexity Low_complexity 1 31 0 2006 124 28 0 chr5 145451694 145451976 -57633556 + AluSx SINE Alu 17 306 -6 21 0 0 0 chr5 145452008 145452029 -57633503 + AT_rich Low_complexity Low_complexity 1 21 0 2174 101 0 16 chr5 145452104 145452412 -57633120 + AluSx SINE Alu 1 303 -9 277 242 55 66 chr5 145452439 145452530 -57633002 + HAL1 LINE L1 321 410 -2097 1743 166 3 14 chr5 145453647 145453942 -57631590 - AluJb SINE Alu -20 292 1 1749 142 58 42 chr5 145454509 145454839 -57630693 + MER47A DNA MER2_type 31 365 -1 2280 84 30 0 chr5 145455111 145455409 -57630123 + AluSp SINE Alu 1 307 -6 1487 117 56 28 chr5 145455584 145455833 -57629699 + Tigger2a DNA MER2_type 1 256 -178 2252 72 21 0 chr5 145455833 145456124 -57629408 + AluY SINE Alu 1 297 -14 570 180 10 0 chr5 145456127 145456227 -57629305 + L1ME LINE L1 5485 5585 -581 249 314 128 36 chr5 145456529 145456634 -57628898 - L2 LINE L2 -9 3304 3210 2305 93 3 0 chr5 145456634 145456924 -57628608 - AluSx SINE Alu -19 293 3 249 314 128 36 chr5 145456924 145457092 -57628440 - L2 LINE L2 -103 3210 3006 186 189 0 0 chr5 145458281 145458318 -57627214 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr5 145458638 145458670 -57626862 + GC_rich Low_complexity Low_complexity 1 32 0 842 175 0 7 chr5 145459457 145459600 -57625932 + MER5B DNA MER1_type 1 142 -36 260 231 324 29 chr5 145459613 145459851 -57625681 + L2 LINE L2 1650 1957 -1357 2088 115 0 0 chr5 145459892 145460171 -57625361 - AluSx SINE Alu -19 293 15 488 187 0 0 chr5 145460262 145460353 -57625179 + L1MC4 LINE L1 7685 7775 -267 528 188 31 0 chr5 145460380 145460476 -57625056 - MER5A DNA MER1_type -90 99 1 1106 168 41 45 chr5 145460476 145460720 -57624812 + L1MC4 LINE L1 7800 8042 0 1221 280 148 34 chr5 145460758 145461372 -57624160 + L2 LINE L2 2186 2869 -445 1282 148 7 92 chr5 145461402 145461641 -57623891 + MLT1D LTR MaLR 28 243 -262 2107 107 21 0 chr5 145461641 145461930 -57623602 + AluSg SINE Alu 1 295 -15 1282 148 7 92 chr5 145461930 145461961 -57623571 + MLT1D LTR MaLR 243 275 -230 2052 103 0 71 chr5 145461964 145462304 -57623228 + AluYb8 SINE Alu 1 316 -2 1753 184 98 25 chr5 145462340 145462736 -57622796 - MLT1D LTR MaLR -80 425 1 715 244 175 50 chr5 145462816 145463319 -57622213 + LTR24B LTR ERV1 4 569 -7 277 283 96 36 chr5 145463320 145463486 -57622046 + L3 LINE CR1 1113 1288 -289 273 253 18 2 chr5 145464160 145464233 -57621299 + MIR SINE MIR 39 112 -96 181 274 143 36 chr5 145465745 145465829 -57619703 - L2 LINE L2 -48 3265 3173 2036 142 3 0 chr5 145465921 145466224 -57619308 + AluSx SINE Alu 1 304 -8 214 333 73 10 chr5 145466238 145466334 -57619198 - L2 LINE L2 -252 3020 2919 209 205 24 84 chr5 145466373 145466456 -57619076 - L2 LINE L2 -4 3268 3191 243 253 193 0 chr5 145466554 145466637 -57618895 - MIR SINE MIR -133 129 31 622 144 108 0 chr5 145466965 145467076 -57618456 - MLT1-int LTR MaLR -1210 161 39 7793 122 31 43 chr5 145467076 145467253 -57618279 - Tigger1 DNA MER2_type 0 2418 2240 2087 110 7 17 chr5 145467253 145467552 -57617980 + AluSq SINE Alu 1 296 -17 7793 122 31 43 chr5 145467552 145468366 -57617166 - Tigger1 DNA MER2_type -178 2240 1445 1763 152 11 0 chr5 145468366 145468642 -57616890 + AluJo SINE Alu 13 291 -21 7793 122 31 43 chr5 145468642 145468982 -57616550 - Tigger1 DNA MER2_type -973 1445 1102 2179 107 3 29 chr5 145468987 145469297 -57616235 - AluSp SINE Alu -11 302 1 261 0 0 0 chr5 145469314 145469343 -57616189 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1259 149 0 5 chr5 145469343 145469539 -57615993 - AluJb SINE Alu -32 280 86 1953 106 11 7 chr5 145469539 145469841 -57615691 - AluSx SINE Alu 0 311 9 2306 179 23 15 chr5 145469886 145470361 -57615171 - L1M4 LINE L1 -393 5791 5313 1828 180 68 14 chr5 145470359 145470725 -57614807 - L1PB4 LINE L1 0 6156 5771 * 22 35 0 0 chr5 145470894 145470923 -57614609 + AT_rich Low_complexity Low_complexity 1 29 0 1735 254 127 43 chr5 145470971 145471956 -57613576 - HAL1 LINE L1 -575 1932 865 301 254 30 0 chr5 145471956 145472023 -57613509 + MIR SINE MIR 194 262 0 269 304 59 15 chr5 145472191 145472326 -57613206 - L2 LINE L2 -849 2465 2325 2299 99 3 7 chr5 145472470 145472774 -57612758 + AluSg SINE Alu 1 303 -7 1878 151 9 49 chr5 145473246 145473443 -57612089 - AluJo SINE Alu 0 312 132 2239 103 0 0 chr5 145473443 145473734 -57611798 + AluSx SINE Alu 1 291 -21 1878 151 9 49 chr5 145473734 145473861 -57611671 - AluJo SINE Alu -180 132 1 591 299 46 5 chr5 145474574 145474771 -57610761 - MIR SINE MIR -44 218 14 327 232 0 40 chr5 145474781 145474798 -57610734 - L1MC4 LINE L1 -1336 6706 6690 2199 92 51 0 chr5 145474798 145475093 -57610439 + AluSx SINE Alu 1 310 -2 343 228 0 33 chr5 145475093 145475185 -57610347 + L1MC4 LINE L1 6615 6703 -1339 537 101 30 0 chr5 145475187 145475286 -57610246 + (TA)n Simple_repeat Simple_repeat 1 102 0 21 57 0 0 chr5 145475701 145475736 -57609796 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 145477407 145477442 -57608090 + AT_rich Low_complexity Low_complexity 1 35 0 962 128 152 25 chr5 145477507 145477750 -57607782 - Charlie1 DNA MER1_type 0 2761 2488 2283 101 13 0 chr5 145477750 145478056 -57607476 - AluSq SINE Alu -3 310 1 489 113 0 0 chr5 145478059 145478130 -57607402 - Charlie1 DNA MER1_type -344 2417 2347 829 135 0 23 chr5 145478152 145478285 -57607247 - FLAM_C SINE Alu -2 141 12 309 88 0 0 chr5 145478329 145478375 -57607157 - Alu SINE Alu -7 301 262 1536 260 69 35 chr5 145478636 145479212 -57606320 + L2 LINE L2 2381 2976 -338 833 228 17 0 chr5 145479256 145479436 -57606096 - Charlie1 DNA MER1_type -576 2185 2003 1053 180 0 0 chr5 145479436 145479603 -57605929 + FRAM SINE Alu 1 167 -9 1230 154 55 40 chr5 145479605 145479877 -57605655 - Charlie1 DNA MER1_type -753 2008 1733 335 210 16 0 chr5 145479880 145479942 -57605590 - Charlie1 DNA MER1_type -2668 93 31 267 337 67 0 chr5 145479954 145480043 -57605489 - MIR SINE MIR -74 134 40 857 153 21 0 chr5 145480247 145480391 -57605141 - Tigger7 DNA MER2_type -2 2489 2343 * 1940 189 52 3 chr5 145480386 145480714 -57604818 - Tigger7 DNA MER2_type -389 344 1 22 0 0 0 chr5 145481090 145481112 -57604420 + AT_rich Low_complexity Low_complexity 1 22 0 2171 130 0 13 chr5 145481259 145481575 -57603957 - AluSx SINE Alu 0 312 1 1803 174 0 0 chr5 145481764 145482052 -57603480 + AluJb SINE Alu 1 288 -24 475 228 9 7 chr5 145482073 145482191 -57603341 - L1ME3A LINE L1 0 6164 6053 189 0 0 0 chr5 145482199 145482220 -57603312 + (A)n Simple_repeat Simple_repeat 1 21 0 1641 245 38 37 chr5 145482220 145482654 -57602878 - L1ME LINE L1 -693 5471 5039 2087 135 3 0 chr5 145482654 145482950 -57602582 + AluSx SINE Alu 1 297 -15 2504 71 0 3 chr5 145482950 145483261 -57602271 + AluY SINE Alu 1 310 -1 1641 245 38 37 chr5 145483261 145483581 -57601951 - L1ME LINE L1 -1124 5040 4714 1907 176 0 3 chr5 145483640 145483953 -57601579 + AluSx SINE Alu 1 312 0 2141 130 0 0 chr5 145483978 145484279 -57601253 - AluSg SINE Alu -5 305 5 2262 116 0 0 chr5 145484279 145484580 -57600952 - AluSq SINE Alu -12 301 1 228 174 0 0 chr5 145484946 145484992 -57600540 + LTR66 LTR ERVL 394 439 -171 22 0 0 0 chr5 145485355 145485377 -57600155 + AT_rich Low_complexity Low_complexity 1 22 0 5827 125 41 0 chr5 145485384 145485819 -57599713 + L1MA5 LINE L1 5341 5757 -543 447 19 0 0 chr5 145485819 145485871 -57599661 + (CA)n Simple_repeat Simple_repeat 1 52 0 5827 125 41 0 chr5 145485871 145486355 -57599177 + L1MA5 LINE L1 5757 6298 -2 22 35 0 0 chr5 145486443 145486472 -57599060 + AT_rich Low_complexity Low_complexity 1 29 0 340 383 5 55 chr5 145487048 145487265 -57598267 - L2 LINE L2 -50 3222 3017 2350 84 3 7 chr5 145487515 145487814 -57597718 + AluSp SINE Alu 1 298 -15 232 317 25 50 chr5 145488166 145488327 -57597205 + LTR67 LTR ERVL 2 158 -399 246 256 146 30 chr5 145488547 145488711 -57596821 + LTR67 LTR ERVL 360 542 -15 2146 84 0 27 chr5 145488771 145489068 -57596464 + AluSq SINE Alu 1 289 -24 1035 110 0 7 chr5 145489889 145490035 -57595497 - AluSx SINE Alu -8 304 160 374 221 0 0 chr5 145490037 145490105 -57595427 - AluSx SINE Alu -234 69 2 250 242 50 111 chr5 145490313 145490456 -57595076 + MLT1J LTR MaLR 313 399 -112 2109 104 35 0 chr5 145490456 145490745 -57594787 - AluSg SINE Alu -11 299 1 250 242 50 111 chr5 145490745 145490850 -57594682 + MLT1J LTR MaLR 399 509 -2 250 337 70 29 chr5 145490900 145491072 -57594460 + L2 LINE L2 3130 3308 -5 1970 162 13 10 chr5 145491331 145491634 -57593898 - AluJo SINE Alu -8 304 1 351 0 0 0 chr5 145491636 145491675 -57593857 + (TG)n Simple_repeat Simple_repeat 2 40 0 1465 143 70 162 chr5 145491686 145492267 -57593265 - L1MD3 LINE L1 0 8042 7527 1811 152 0 26 chr5 145492358 145492660 -57592872 - AluSx SINE Alu -18 294 1 487 261 18 0 chr5 145492747 145492900 -57592632 - MER20 DNA MER1_type -5 214 56 25 31 0 0 chr5 145494605 145494637 -57590895 + AT_rich Low_complexity Low_complexity 1 32 0 2411 88 3 0 chr5 145494826 145495132 -57590400 + AluSg SINE Alu 3 309 -1 2354 88 3 10 chr5 145495224 145495530 -57590002 + AluSp SINE Alu 1 304 -9 1610 221 3 0 chr5 145495624 145495923 -57589609 - AluJb SINE Alu -12 300 1 2031 145 20 0 chr5 145496002 145496299 -57589233 + AluSp SINE Alu 1 303 -10 879 224 0 6 chr5 145496300 145496465 -57589067 - FAM SINE Alu -11 164 1 2324 95 3 0 chr5 145497201 145497497 -57588035 + AluSp SINE Alu 1 297 -16 330 307 206 37 chr5 145497652 145497870 -57587662 + L1ME LINE L1 5298 5552 -2256 558 244 41 0 chr5 145497893 145498016 -57587516 - FLAM_A SINE Alu -5 128 1 310 348 72 0 chr5 145498071 145498252 -57587280 + L1ME LINE L1 5631 5824 -297 423 0 0 0 chr5 145498257 145498304 -57587228 + (CA)n Simple_repeat Simple_repeat 2 48 0 944 152 67 54 chr5 145498306 145498530 -57587002 + MER46A DNA MER2_type 5 231 -5 34 24 0 0 chr5 145498788 145498829 -57586703 + AT_rich Low_complexity Low_complexity 1 41 0 970 274 104 11 chr5 145499174 145499729 -57585803 - L1ME LINE L1 -361 5801 5197 2255 189 36 34 chr5 145499731 145500235 -57585297 + MLT2B1 LTR ERVL 14 518 -2 1628 260 58 37 chr5 145500250 145500600 -57584932 - L2 LINE L2 -929 2385 2019 658 223 207 47 chr5 145500600 145500793 -57584739 + MER58A DNA MER1_type 1 224 0 1628 260 58 37 chr5 145500793 145500958 -57584574 - L2 LINE L2 -1295 2019 1859 319 300 62 8 chr5 145500984 145501114 -57584418 + L1ME1 LINE L1 4563 4699 -1447 279 206 41 10 chr5 145501118 145501215 -57584317 + L1ME1 LINE L1 4924 5023 -1123 1105 113 14 11 chr5 145501215 145501485 -57584047 - MER4B LTR ERV1 0 610 261 568 124 21 10 chr5 145501485 145501582 -57583950 - MER4A LTR ERV1 -566 98 1 1079 202 88 8 chr5 145501583 145502023 -57583509 + L1ME1 LINE L1 5021 5498 -668 1363 147 5 0 chr5 145502023 145502221 -57583311 - AluSx SINE Alu -113 199 1 1512 180 44 58 chr5 145502221 145502286 -57583246 + L1ME1 LINE L1 5517 5581 -585 2166 120 0 58 chr5 145502286 145502612 -57582920 - AluSg SINE Alu -3 307 1 1512 180 44 58 chr5 145502612 145502979 -57582553 + L1ME1 LINE L1 5581 5943 -223 432 194 19 19 chr5 145503216 145503324 -57582208 - LTR43 LTR ERV1 -306 296 189 349 211 32 84 chr5 145503530 145503625 -57581907 + L1ME1 LINE L1 5947 6036 -130 2401 151 55 0 chr5 145503629 145504033 -57581499 + MSTB LTR MaLR 1 426 0 266 292 87 32 chr5 145504279 145504498 -57581034 - HAL1 LINE L1 -864 1643 1413 2016 132 7 0 chr5 145504631 145504926 -57580606 - AluSx SINE Alu -15 297 1 265 253 75 101 chr5 145504964 145505447 -57580085 - L1MEd LINE L1 -5067 1052 583 1524 150 4 12 chr5 145505490 145505744 -57579788 + AluJb SINE Alu 2 253 -59 478 171 0 0 chr5 145505744 145505832 -57579700 + AluJ/FRAM SINE Alu 223 310 -2 34 0 0 0 chr5 145505832 145505866 -57579666 + AT_rich Low_complexity Low_complexity 1 34 0 2384 97 0 0 chr5 145505885 145506193 -57579339 - AluSx SINE Alu 0 312 5 363 254 61 18 chr5 145506415 145506529 -57579003 - L1MEd LINE L1 -5896 223 105 394 269 21 60 chr5 145506533 145506698 -57578834 + L1MC4 LINE L1 6890 7045 -997 2208 96 3 14 chr5 145506698 145506991 -57578541 + AluSq SINE Alu 1 290 -23 394 269 21 60 chr5 145506991 145507059 -57578473 + L1MC4 LINE L1 7045 7114 -928 1961 167 0 6 chr5 145507228 145507540 -57577992 - AluJb SINE Alu -2 310 1 221 289 60 12 chr5 145507716 145507799 -57577733 - L2 LINE L2 -1 3271 3185 21 0 0 0 chr5 145507872 145507893 -57577639 + AT_rich Low_complexity Low_complexity 1 21 0 794 201 61 18 chr5 145508021 145508185 -57577347 + FAM SINE Alu 1 40 -9 239 293 24 24 chr5 145508334 145508416 -57577116 - LTR16A LTR ERVL 0 450 369 735 254 71 8 chr5 145508468 145508708 -57576824 - LTR16A LTR ERVL -179 271 17 419 260 65 16 chr5 145508955 145509078 -57576454 + MIR3 SINE MIR 35 163 -45 227 135 0 0 chr5 145509982 145510019 -57575513 + AluJo SINE Alu 1 37 -266 1911 133 3 20 chr5 145510019 145510312 -57575220 + AluJo SINE Alu 16 303 -9 1041 178 4 69 chr5 145510888 145511119 -57574413 + MER58A DNA MER1_type 9 224 0 815 234 61 26 chr5 145511282 145511682 -57573850 + L1ME3A LINE L1 4899 5284 -886 1988 148 6 6 chr5 145511682 145511993 -57573539 + AluJb SINE Alu 1 311 -1 815 234 61 26 chr5 145511993 145512714 -57572818 + L1ME3A LINE L1 5284 6162 -8 431 280 79 32 chr5 145512727 145512916 -57572616 + L1ME3A LINE L1 5937 6134 -36 26 30 0 0 chr5 145512960 145512993 -57572539 + AT_rich Low_complexity Low_complexity 1 33 0 1720 206 0 0 chr5 145513444 145513745 -57571787 + AluJb SINE Alu 1 301 -11 2175 87 17 0 chr5 145513995 145514294 -57571238 - AluY SINE Alu -7 304 1 2026 131 0 3 chr5 145514674 145514956 -57570576 - AluSx SINE Alu -12 300 20 1709 76 22 0 chr5 145514981 145515206 -57570326 - MER30 DNA MER1_type 0 230 1 524 214 123 13 chr5 145516103 145516292 -57569240 + MIR SINE MIR 11 262 0 4182 272 58 11 chr5 145517304 145518536 -57566996 + L2 LINE L2 1500 2789 -525 673 329 24 4 chr5 145519171 145519423 -57566109 + ERVL LTR ERVL 420 676 -5088 1007 275 37 9 chr5 145519496 145519845 -57565687 + ERVL LTR ERVL 845 1203 -4561 2249 275 14 14 chr5 145520083 145520676 -57564856 + ERVL LTR ERVL 1697 2289 -3475 814 204 0 20 chr5 145520914 145521061 -57564471 + FRAM SINE Alu 8 151 -25 974 108 8 0 chr5 145521142 145521272 -57564260 + AluSq/x SINE Alu 1 131 -181 23 78 0 0 chr5 145521335 145521386 -57564146 + AT_rich Low_complexity Low_complexity 1 51 0 1912 145 0 36 chr5 145521552 145521695 -57563837 + AluJb SINE Alu 1 129 -183 1985 125 0 61 chr5 145521695 145522007 -57563525 + AluSx SINE Alu 1 293 -19 1912 145 0 36 chr5 145522007 145522166 -57563366 + AluJb SINE Alu 129 292 -20 1216 203 62 60 chr5 145522436 145522805 -57562727 + MLT1A2 LTR MaLR 5 374 0 213 39 0 0 chr5 145522956 145522982 -57562550 + (TG)n Simple_repeat Simple_repeat 2 27 0 782 164 0 8 chr5 145522982 145523104 -57562428 - FLAM_C SINE Alu -12 121 1 207 69 0 0 chr5 145523192 145523221 -57562311 + (TTA)n Simple_repeat Simple_repeat 2 30 0 646 207 0 9 chr5 145523227 145523343 -57562189 - FLAM_A SINE Alu -18 115 1 2009 159 0 0 chr5 145523441 145523742 -57561790 + AluJb SINE Alu 1 301 -11 326 281 22 29 chr5 145523984 145524123 -57561409 - L1M4 LINE L1 -1993 4153 4016 254 265 39 0 chr5 145524157 145524259 -57561273 - LTR33A LTR ERVL -23 500 395 308 262 15 94 chr5 145524598 145524960 -57560572 - L1M4 LINE L1 -2229 3917 3595 23 0 0 0 chr5 145525164 145525187 -57560345 + AT_rich Low_complexity Low_complexity 1 23 0 2296 108 7 0 chr5 145525569 145525875 -57559657 - AluSx SINE Alu 0 312 5 1921 147 0 7 chr5 145525905 145526204 -57559328 - AluJb SINE Alu -15 297 1 2319 107 0 3 chr5 145526242 145526550 -57558982 + AluSq SINE Alu 3 309 -4 29 0 0 0 chr5 145526671 145526700 -57558832 + AT_rich Low_complexity Low_complexity 1 29 0 345 274 28 0 chr5 145526902 145527008 -57558524 - L1MC4a LINE L1 -1866 5925 5817 28 79 0 0 chr5 145527014 145527077 -57558455 + AT_rich Low_complexity Low_complexity 1 63 0 512 256 48 44 chr5 145527079 145527165 -57558367 - L1MC4a LINE L1 -2013 5778 5694 1990 114 21 7 chr5 145527165 145527455 -57558077 - AluSx SINE Alu -18 294 1 512 256 48 44 chr5 145527455 145527595 -57557937 - L1MC4a LINE L1 -2097 5694 5551 684 217 42 12 chr5 145527611 145527777 -57557755 + MLT1J1 LTR MaLR 162 332 -114 254 210 100 10 chr5 145527972 145528072 -57557460 - L1MC4a LINE L1 -2293 5498 5390 1064 170 40 90 chr5 145528076 145528108 -57557424 - MLT2B2 LTR ERVL -8 507 475 288 53 0 0 chr5 145528108 145528146 -57557386 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 2404 94 0 0 chr5 145528146 145528453 -57557079 + AluSg SINE Alu 2 308 -2 1064 170 40 90 chr5 145528453 145528681 -57556851 - MLT2B2 LTR ERVL -39 476 238 2194 88 10 7 chr5 145528681 145528978 -57556554 - AluSg SINE Alu -12 298 1 1064 170 40 90 chr5 145528978 145529082 -57556450 - MLT2B2 LTR ERVL -277 238 130 2456 85 0 0 chr5 145529082 145529377 -57556155 - AluSc SINE Alu -14 295 1 2236 112 0 3 chr5 145529379 145529683 -57555849 - AluSg SINE Alu -7 303 1 1064 170 40 90 chr5 145529683 145529759 -57555773 - MLT2B2 LTR ERVL -386 129 1 253 225 0 101 chr5 145529759 145529888 -57555644 - L1MC4a LINE L1 -2397 5394 5279 863 306 40 76 chr5 145529902 145530227 -57555305 - L1MC4a LINE L1 -906 5223 4933 2008 129 14 3 chr5 145530227 145530513 -57555019 - AluSx SINE Alu -23 289 1 863 306 40 76 chr5 145530513 145530860 -57554672 - L1MC4a LINE L1 -1196 4933 4575 284 252 32 29 chr5 145531001 145531213 -57554319 - L1MDa LINE L1 -4598 1531 1275 1699 149 6 56 chr5 145531353 145531675 -57553857 - AluJo SINE Alu 0 312 7 330 263 48 32 chr5 145531712 145531898 -57553634 - L1MDa LINE L1 -4877 1242 1054 1140 79 11 63 chr5 145531929 145532005 -57553527 + L1PA8 LINE L1 5992 6070 -102 2291 72 3 20 chr5 145532005 145532309 -57553223 + AluY SINE Alu 1 299 -12 1140 79 11 63 chr5 145532309 145532422 -57553110 + L1PA8 LINE L1 6070 6171 -1 317 236 79 47 chr5 145532452 145532579 -57552953 - L1MDa LINE L1 -5092 1027 897 2189 91 0 14 chr5 145532682 145532979 -57552553 + AluSg SINE Alu 18 310 0 39 50 0 0 chr5 145532985 145533045 -57552487 + AT_rich Low_complexity Low_complexity 1 60 0 1006 184 0 0 chr5 145533081 145533244 -57552288 + AluJb SINE Alu 138 300 -12 413 329 74 56 chr5 145533412 145533980 -57551552 - L1MDa LINE L1 -5476 643 66 2387 51 54 0 chr5 145534756 145535050 -57550482 - AluY SINE Alu 0 311 2 334 331 155 11 chr5 145535535 145535813 -57549719 + L2 LINE L2 2996 3313 0 22 0 0 0 chr5 145536360 145536382 -57549150 + AT_rich Low_complexity Low_complexity 1 22 0 730 172 112 59 chr5 145536989 145537087 -57548445 + MER45A DNA AcHobo 1 113 -1468 2358 65 0 23 chr5 145537087 145537393 -57548139 + AluY SINE Alu 1 299 -12 730 172 112 59 chr5 145537393 145537463 -57548069 + MER45A DNA AcHobo 113 178 0 1163 270 30 20 chr5 145537772 145538213 -57547319 + L1ME3A LINE L1 2266 2710 -3436 2117 132 0 0 chr5 145538218 145538513 -57547019 + AluSx SINE Alu 1 295 -17 314 215 0 31 chr5 145539418 145539483 -57546049 + MER5B DNA MER1_type 2 64 -114 788 272 120 61 chr5 145539701 145539963 -57545569 - HAL1b LINE L1 -702 646 401 2214 132 6 0 chr5 145539963 145540274 -57545258 + AluSq SINE Alu 1 313 0 788 272 120 61 chr5 145540274 145540551 -57544981 - HAL1b LINE L1 -947 401 88 1975 121 68 0 chr5 145540551 145540831 -57544701 - AluSp SINE Alu -12 301 3 788 272 120 61 chr5 145540831 145540921 -57544611 - HAL1b LINE L1 -1260 88 5 1800 261 109 78 chr5 145540961 145541126 -57544406 + L1ME3A LINE L1 3726 3884 -2262 2086 122 0 7 chr5 145541126 145541420 -57544112 + AluSg SINE Alu 1 292 -18 1800 261 109 78 chr5 145541420 145541433 -57544099 + L1ME3A LINE L1 3884 3895 -2251 1434 185 27 27 chr5 145541433 145541730 -57543802 - AluJo SINE Alu -15 297 1 1800 261 109 78 chr5 145541730 145541918 -57543614 + L1ME3A LINE L1 3895 4076 -2070 2293 114 3 0 chr5 145541918 145542225 -57543307 - AluSg SINE Alu -1 309 2 1800 261 109 78 chr5 145542225 145542804 -57542728 + L1ME3A LINE L1 4076 4726 -1420 2219 125 0 0 chr5 145542804 145543107 -57542425 - AluSx SINE Alu -9 303 1 1800 261 109 78 chr5 145543107 145543432 -57542100 + L1ME3A LINE L1 4726 5039 -1107 1150 152 0 0 chr5 145543517 145543682 -57541850 + FRAM SINE Alu 1 156 -20 771 267 48 91 chr5 145543685 145544123 -57541409 + L1ME3A LINE L1 5430 5851 -318 1806 117 58 67 chr5 145544193 145544536 -57540996 + L1MC2 LINE L1 5821 6160 -184 786 156 16 23 chr5 145544549 145544677 -57540855 + FLAM_C SINE Alu 2 128 -15 656 178 92 61 chr5 145544683 145544846 -57540686 + L1MC2 LINE L1 6170 6337 -7 21 89 0 0 chr5 145544846 145544902 -57540630 + AT_rich Low_complexity Low_complexity 1 56 0 1841 173 6 10 chr5 145545521 145545833 -57539699 + AluJb SINE Alu 1 311 -1 468 0 0 0 chr5 145545849 145545901 -57539631 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 2312 85 3 10 chr5 145546161 145546466 -57539066 + AluSx SINE Alu 1 303 -9 2361 104 0 7 chr5 145547272 145547581 -57537951 + AluSp SINE Alu 1 307 -6 1455 56 0 17 chr5 145547824 145548003 -57537529 - L1PA6 LINE L1 0 6154 5979 2197 128 0 0 chr5 145548049 145548361 -57537171 + AluSx SINE Alu 1 312 0 1336 154 147 0 chr5 145548941 145549220 -57536312 + MER33 DNA MER1_type 5 324 0 2230 94 10 0 chr5 145549272 145549560 -57535972 + AluSg SINE Alu 1 291 -19 424 267 106 50 chr5 145549594 145549843 -57535689 - MIR SINE MIR 0 262 3 2447 191 85 31 chr5 145550207 145550761 -57534771 - MLT1E2 LTR MaLR -7 619 36 22 0 0 0 chr5 145551040 145551062 -57534470 + AT_rich Low_complexity Low_complexity 1 22 0 923 121 0 0 chr5 145551062 145551186 -57534346 - AluSq/x SINE Alu -189 124 1 2114 127 3 3 chr5 145551268 145551567 -57533965 - AluSx SINE Alu -13 299 1 460 218 54 20 chr5 145552050 145552197 -57533335 + MER113 DNA MER1_type? 61 212 -309 335 219 0 0 chr5 145552431 145552495 -57533037 + MER113 DNA MER1_type? 458 521 0 252 309 0 0 chr5 145552677 145552732 -57532800 + L2 LINE L2 3205 3259 -13 300 277 134 8 chr5 145553436 145553555 -57531977 + MER94 DNA DNA 1 134 0 412 289 81 43 chr5 145553837 145554072 -57531460 - MIR SINE MIR -1 261 18 2306 98 0 7 chr5 145554130 145554435 -57531097 + AluSx SINE Alu 1 303 -9 2241 118 0 0 chr5 145554441 145554746 -57530786 + AluSq SINE Alu 1 305 -8 21 71 0 0 chr5 145555183 145555225 -57530307 + AT_rich Low_complexity Low_complexity 1 42 0 1755 161 10 30 chr5 145555360 145555665 -57529867 + AluJb SINE Alu 1 299 -13 22 0 0 0 chr5 145556192 145556214 -57529318 + AT_rich Low_complexity Low_complexity 1 22 0 349 176 85 125 chr5 145556272 145556373 -57529159 - L2 LINE L2 -50 3263 3170 1286 180 184 17 chr5 145556373 145556667 -57528865 + MER2 DNA MER2_type 1 343 -1 349 176 85 125 chr5 145556667 145556741 -57528791 - L2 LINE L2 -143 3170 3095 931 150 105 30 chr5 145556745 145556945 -57528587 - AluJo SINE Alu -16 296 82 561 213 44 7 chr5 145556945 145557081 -57528451 - L2 LINE L2 -780 2534 2394 26 30 0 0 chr5 145557693 145557726 -57527806 + GC_rich Low_complexity Low_complexity 1 33 0 302 115 0 19 chr5 145558762 145558814 -57526718 + L2 LINE L2 3263 3313 0 223 188 0 42 chr5 145559283 145559331 -57526201 - L2 LINE L2 -3 3310 3265 1854 124 11 4 chr5 145560239 145560513 -57525019 - AluSx SINE Alu -2 310 35 189 0 0 0 chr5 145560744 145560765 -57524767 + (T)n Simple_repeat Simple_repeat 1 21 0 2427 67 0 13 chr5 145560844 145561144 -57524388 - AluSc SINE Alu -13 296 1 21 36 0 0 chr5 145561467 145561495 -57524037 + AT_rich Low_complexity Low_complexity 1 28 0 2324 116 3 0 chr5 145561839 145562150 -57523382 - AluSx SINE Alu 0 312 1 2277 108 3 0 chr5 145562239 145562536 -57522996 - AluSp SINE Alu -13 300 3 2197 95 20 0 chr5 145562541 145562835 -57522697 - AluSc SINE Alu -8 301 2 2212 103 17 0 chr5 145563274 145563564 -57521968 + AluSx SINE Alu 1 295 -17 2108 133 7 0 chr5 145563566 145563875 -57521657 + AluSx SINE Alu 1 311 -1 2415 81 0 3 chr5 145563880 145564187 -57521345 + AluY SINE Alu 1 306 -5 1129 111 39 53 chr5 145565210 145565417 -57520115 - MER2 DNA MER2_type -141 204 1 3296 262 113 84 chr5 145565426 145565784 -57519748 + L2 LINE L2 916 1262 -2052 216 0 0 0 chr5 145565784 145565808 -57519724 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2115 111 0 34 chr5 145565811 145566108 -57519424 - AluSx SINE Alu -25 287 1 3296 262 113 84 chr5 145566108 145566935 -57518597 + L2 LINE L2 1263 2065 -1249 2321 97 0 13 chr5 145566935 145567243 -57518289 - AluSx SINE Alu -8 304 1 3296 262 113 84 chr5 145567243 145567276 -57518256 + L2 LINE L2 2065 2096 -1218 2342 61 17 10 chr5 145567276 145567571 -57517961 + AluY SINE Alu 1 297 -14 1760 151 35 3 chr5 145567572 145567857 -57517675 - AluJb SINE Alu -18 294 1 3296 262 113 84 chr5 145567857 145568594 -57516938 + L2 LINE L2 2095 2935 -379 349 250 50 0 chr5 145568612 145568692 -57516840 + L2 LINE L2 3228 3311 -2 2131 119 10 0 chr5 145569086 145569381 -57516151 - AluSx SINE Alu -14 298 1 198 0 0 0 chr5 145569444 145569466 -57516066 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1598 157 30 40 chr5 145569947 145570246 -57515286 + AluJb SINE Alu 1 296 -16 2157 113 0 39 chr5 145570512 145570821 -57514711 - AluSx SINE Alu -14 298 2 762 315 175 5 chr5 145571266 145571733 -57513799 + L2 LINE L2 2746 3293 -20 1403 167 53 18 chr5 145571785 145572066 -57513466 - AluSx SINE Alu -21 291 1 838 186 153 6 chr5 145572238 145572421 -57513111 - MER63A DNA MER1_type 0 210 1 264 226 0 32 chr5 145572424 145572486 -57513046 - MER116 DNA Mariner -4 76 17 376 120 53 0 chr5 145572488 145572563 -57512969 + C-rich Low_complexity Low_complexity 2 80 0 2039 146 7 0 chr5 145572563 145572857 -57512675 - AluSx SINE Alu -14 298 3 1631 174 24 14 chr5 145573562 145573850 -57511682 + AluJb SINE Alu 1 291 -21 366 310 176 19 chr5 145575503 145575719 -57509813 + MIR SINE MIR 3 252 -10 2597 184 63 33 chr5 145576361 145576419 -57509113 - L1MB7 LINE L1 -7 6177 6122 2310 78 0 3 chr5 145576419 145576703 -57508829 - AluY SINE Alu -28 283 1 2392 81 3 0 chr5 145576704 145577001 -57508531 - AluSp SINE Alu -15 298 1 2597 184 63 33 chr5 145577001 145577268 -57508264 - L1MB7 LINE L1 -62 6122 5865 2252 107 3 0 chr5 145577268 145577567 -57507965 - AluSp SINE Alu -13 300 1 2597 184 63 33 chr5 145577567 145577869 -57507663 - L1MB7 LINE L1 -319 5865 5528 960 111 0 0 chr5 145577869 145578004 -57507528 - L1MB7 LINE L1 -276 5908 5774 256 266 53 18 chr5 145578013 145578126 -57507406 + L1ME LINE L1 5677 5793 -328 1454 201 11 11 chr5 145578273 145578547 -57506985 - AluJo SINE Alu -38 274 1 286 167 0 0 chr5 145578562 145578622 -57506910 + L1ME4a LINE L1 6061 6120 -1 753 186 8 0 chr5 145578658 145578776 -57506756 + FLAM_A SINE Alu 10 128 -14 1469 179 41 0 chr5 145578780 145579048 -57506484 + AluJb SINE Alu 1 279 -33 23 0 0 0 chr5 145579196 145579219 -57506313 + AT_rich Low_complexity Low_complexity 1 23 0 1638 138 6 102 chr5 145579823 145580157 -57505375 - AluJb SINE Alu -10 302 1 216 0 0 0 chr5 145580159 145580183 -57505349 + (T)n Simple_repeat Simple_repeat 1 24 0 2361 138 46 46 chr5 145580318 145580752 -57504780 + Tigger2a DNA MER2_type 1 434 0 203 30 0 61 chr5 145580752 145580785 -57504747 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2257 85 0 0 chr5 145580788 145581069 -57504463 - AluSx SINE Alu -31 281 1 1703 159 7 36 chr5 145581230 145581538 -57503994 - AluJb SINE Alu -3 309 11 22 70 0 0 chr5 145581658 145581701 -57503831 + AT_rich Low_complexity Low_complexity 1 43 0 1528 149 94 22 chr5 145581736 145582012 -57503520 + AluJo SINE Alu 1 296 -16 788 247 6 6 chr5 145582279 145582441 -57503091 - FRAM SINE Alu -22 154 1 393 177 83 10 chr5 145582803 145582899 -57502633 - Charlie2a DNA MER1_type -43 2819 2717 346 200 163 22 chr5 145582941 145583076 -57502456 - Charlie2a DNA MER1_type -1227 1635 1482 2487 61 0 3 chr5 145583165 145583461 -57502071 + AluY SINE Alu 1 295 -16 755 251 126 34 chr5 145583514 145583613 -57501919 - Charlie2a DNA MER1_type -2448 334 245 1741 182 0 23 chr5 145583613 145583921 -57501611 - AluJo SINE Alu -11 301 1 755 251 126 34 chr5 145583921 145584084 -57501448 - Charlie2a DNA MER1_type -2537 245 48 1891 127 26 16 chr5 145584247 145584554 -57500978 - AluJb SINE Alu -2 310 1 563 278 17 28 chr5 145585041 145585217 -57500315 - MER5B DNA MER1_type -2 176 3 2276 106 10 0 chr5 145585736 145586039 -57499493 + AluSc SINE Alu 1 306 -3 2267 103 26 0 chr5 145586059 145586361 -57499171 + AluSx SINE Alu 1 310 -2 1639 145 41 66 chr5 145586388 145586706 -57498826 + AluJb SINE Alu 1 310 -2 2166 130 51 65 chr5 145586829 145587055 -57498477 + MLT1A1 LTR MaLR 1 222 -143 2366 93 0 0 chr5 145587055 145587356 -57498176 + AluSq SINE Alu 1 301 -12 2166 130 51 65 chr5 145587356 145587499 -57498033 + MLT1A1 LTR MaLR 222 365 0 233 158 0 0 chr5 145788018 145788056 -57297476 - Alu SINE Alu -261 38 1 419 188 118 9 chr5 145788105 145788233 -57297299 - L1ME LINE L1 -486 5680 5542 285 291 128 26 chr5 145788609 145788726 -57296806 + MIR3 SINE MIR 77 205 -3 314 319 222 23 chr5 145789004 145789270 -57296262 - L3 LINE CR1 -14 1563 1245 1758 146 6 75 chr5 145789403 145789724 -57295808 - AluJo SINE Alu -13 299 1 1053 191 122 51 chr5 145790320 145790712 -57294820 - L1ME2 LINE L1 -24 6140 5721 855 202 122 12 chr5 145790715 145790990 -57294542 - MER57A LTR ERV1 0 403 132 2298 143 27 11 chr5 145790993 145791441 -57294091 - L1 LINE L1 -784 5362 4908 1437 186 19 4 chr5 145791441 145791704 -57293828 + Tigger7 DNA MER2_type 1 267 -466 404 114 253 0 chr5 145791702 145791781 -57293751 + Tigger7 DNA MER2_type 2389 2487 0 * 3838 145 17 1 chr5 145791781 145792498 -57293034 - L1 LINE L1 -1237 4909 4182 7632 30 0 0 chr5 145792506 145793517 -57292015 - L1PA3 LINE L1 0 6155 5145 37199 42 28 3 chr5 145793517 145798411 -57287121 - L1P LINE L1 -1124 5022 1 2318 97 0 0 chr5 145798414 145798725 -57286807 - AluY SINE Alu 0 311 1 920 255 101 14 chr5 145798762 145799263 -57286269 - L1ME LINE L1 -933 5213 4643 1137 145 0 0 chr5 145799272 145799438 -57286094 - AluSg/x SINE Alu -13 299 134 484 218 34 76 chr5 145799446 145799677 -57285855 - L1ME LINE L1 -1498 4648 4383 1757 170 0 29 chr5 145799677 145799983 -57285549 - AluJo SINE Alu -15 297 1 484 218 34 76 chr5 145799983 145800105 -57285427 - L1ME LINE L1 -1763 4383 4257 208 328 124 5 chr5 145800433 145800619 -57284913 - L2 LINE L2 -776 2538 2331 339 250 77 19 chr5 145800685 145800789 -57284743 - MIR SINE MIR -152 110 1 760 225 52 64 chr5 145800863 145801184 -57284348 - MER102a DNA MER1_type 0 330 25 474 256 77 24 chr5 145801929 145802136 -57283396 + MLT1L LTR MaLR 162 379 -236 1638 138 31 101 chr5 145803353 145803680 -57281852 - AluJb SINE Alu -8 304 1 435 308 84 21 chr5 145803866 145804217 -57281315 + MLT1K LTR MaLR 218 615 0 2083 106 0 11 chr5 145804337 145804619 -57280913 - AluSx SINE Alu -6 306 28 2549 68 0 0 chr5 145805211 145805522 -57280010 + AluY SINE Alu 1 311 0 2123 128 0 28 chr5 145805544 145805865 -57279667 + AluSx SINE Alu 1 312 0 2305 86 3 3 chr5 145805900 145806191 -57279341 + AluSx SINE Alu 1 291 -21 311 220 25 107 chr5 145806464 145806623 -57278909 + L1MC4a LINE L1 5511 5656 -465 335 283 102 80 chr5 145806673 145806821 -57278711 + L1MC4a LINE L1 5683 5826 -1982 554 259 36 0 chr5 145806821 145806933 -57278599 + FLAM_A SINE Alu 1 116 -17 335 283 102 80 chr5 145806933 145807145 -57278387 + L1MC4a LINE L1 5826 6051 -1757 2525 62 0 0 chr5 145807285 145807590 -57277942 - AluY SINE Alu -5 306 2 1965 152 32 0 chr5 145807602 145807950 -57277582 - L1MB2 LINE L1 0 6171 5813 548 239 0 23 chr5 145807950 145808080 -57277452 - FLAM_A SINE Alu -8 134 8 1297 175 82 74 chr5 145808080 145808458 -57277074 - L1MB2 LINE L1 -347 5824 5444 1578 201 17 3 chr5 145808466 145808765 -57276767 - AluJo SINE Alu -9 303 1 21 82 0 0 chr5 145808772 145808821 -57276711 + AT_rich Low_complexity Low_complexity 1 49 0 234 0 0 0 chr5 145808989 145809015 -57276517 + (T)n Simple_repeat Simple_repeat 1 26 0 382 300 91 55 chr5 145810453 145810706 -57274826 - L1ME4a LINE L1 -283 5838 5577 187 190 224 17 chr5 145811079 145811137 -57274395 - MIR3 SINE MIR -23 185 116 256 279 73 40 chr5 145811449 145811548 -57273984 - L1ME4a LINE L1 -3190 2956 2862 1954 63 4 0 chr5 145811548 145811786 -57273746 - AluY SINE Alu -14 297 59 256 279 73 40 chr5 145811786 145811958 -57273574 - L1ME4a LINE L1 -3284 2862 2676 315 300 73 64 chr5 145811965 145812226 -57273306 - L1ME4a LINE L1 -3526 2620 2354 624 171 57 16 chr5 145812226 145812349 -57273183 - FLAM_C SINE Alu -5 128 1 315 300 73 64 chr5 145812349 145812417 -57273115 - L1ME4a LINE L1 -3792 2354 2288 242 279 48 0 chr5 145812942 145813046 -57272486 - HAL1 LINE L1 -849 1658 1550 699 261 87 23 chr5 145813050 145813314 -57272218 + MER46C DNA MER2_type 1 281 -57 807 169 164 15 chr5 145813317 145813518 -57272014 - MSTD LTR MaLR 0 396 166 296 143 0 18 chr5 145813562 145813618 -57271914 - MSTD LTR MaLR -341 55 1 259 214 0 0 chr5 145813618 145813673 -57271859 + MER46C DNA MER2_type 280 334 -4 2416 101 0 0 chr5 145815035 145815343 -57270189 + AluSq SINE Alu 1 308 -5 1186 253 73 0 chr5 145815345 145815646 -57269886 - MLT1H1 LTR MaLR -1 554 232 1088 185 22 36 chr5 145815964 145816140 -57269392 + MER20 DNA MER1_type 1 175 -44 1671 157 6 64 chr5 145816140 145816453 -57269079 + AluJb SINE Alu 1 295 -17 1088 185 22 36 chr5 145816453 145816498 -57269034 + MER20 DNA MER1_type 175 219 0 41304 44 4 1 chr5 145817381 145823518 -57262014 - L1PA4 LINE L1 0 6155 1 769 275 33 14 chr5 145823994 145824205 -57261327 - MIR SINE MIR -46 216 2 472 311 111 70 chr5 145824219 145824380 -57261152 + L1MEd LINE L1 739 892 -5480 2335 103 0 6 chr5 145824380 145824691 -57260841 + AluSc SINE Alu 1 309 0 472 311 111 70 chr5 145824691 145824940 -57260592 + L1MEd LINE L1 892 1175 -5197 2213 129 0 10 chr5 145824940 145825250 -57260282 + AluSx SINE Alu 1 307 -5 472 311 111 70 chr5 145825250 145825324 -57260208 + L1MEd LINE L1 1175 1244 -5128 303 257 62 0 chr5 145825440 145825568 -57259964 + L1MEd LINE L1 1582 1768 -4614 1070 212 44 0 chr5 145825571 145825797 -57259735 + Tigger7 DNA MER2_type 1 236 -469 485 241 0 9 chr5 145825795 145825903 -57259629 + Tigger7 DNA MER2_type 2481 2587 0 * 318 237 0 0 chr5 145825926 145826002 -57259530 + L1MC4 LINE L1 7962 8037 -5 1815 170 28 0 chr5 145826103 145826391 -57259141 - AluSx SINE Alu -16 296 1 226 222 0 0 chr5 145826533 145826578 -57258954 - MIR SINE MIR -74 188 144 927 265 101 26 chr5 145826579 145827006 -57258526 + HAL1 LINE L1 1318 1776 -731 312 219 61 24 chr5 145827122 145827204 -57258328 + HAL1 LINE L1 2002 2086 -421 899 100 0 8 chr5 145827206 145827326 -57258206 + AluSg/x SINE Alu 178 296 -14 229 236 50 93 chr5 145827352 145827415 -57258117 + HAL1 LINE L1 2292 2356 -151 2224 113 0 0 chr5 145827415 145827707 -57257825 + AluSc SINE Alu 2 293 -16 229 236 50 93 chr5 145827707 145827783 -57257749 + HAL1 LINE L1 2356 2425 -82 2164 107 7 7 chr5 145827801 145828099 -57257433 - AluSg SINE Alu -10 300 3 1833 157 0 0 chr5 145828124 145828392 -57257140 - AluSx SINE Alu -10 302 35 257 296 68 23 chr5 145828568 145828744 -57256788 - L2 LINE L2 -913 2401 2218 2249 102 3 3 chr5 145828846 145829141 -57256391 + AluSp SINE Alu 3 297 -16 284 267 12 12 chr5 145829141 145829227 -57256305 + GA-rich Low_complexity Low_complexity 1 86 0 36991 68 11 2 chr5 145829463 145834569 -57250963 + L1PA5 LINE L1 10 5156 -990 2752 55 11 0 chr5 145834569 145834914 -57250618 + L1PA5 LINE L1 5801 6152 -2 583 252 0 0 chr5 145834915 145835034 -57250498 + Tigger2 DNA MER2_type 2600 2718 0 28 29 0 0 chr5 145835729 145835764 -57249768 + AT_rich Low_complexity Low_complexity 1 35 0 261 0 0 0 chr5 145836021 145836050 -57249482 + (TG)n Simple_repeat Simple_repeat 2 30 0 874 226 118 29 chr5 145836100 145836350 -57249182 + L1ME1 LINE L1 4578 4804 -1362 1784 154 3 18 chr5 145836350 145836663 -57248869 - AluJb SINE Alu 0 309 1 2438 77 0 0 chr5 145836667 145836967 -57248565 - AluY SINE Alu -11 300 1 874 226 118 29 chr5 145836967 145837907 -57247625 + L1ME1 LINE L1 4806 5949 -217 1574 202 3 7 chr5 145838389 145838681 -57246851 - AluJb SINE Alu -21 291 1 1855 182 0 0 chr5 145838697 145838994 -57246538 - AluSx SINE Alu -15 297 1 2065 126 0 20 chr5 145839036 145839337 -57246195 + AluSx SINE Alu 1 295 -17 1698 193 7 0 chr5 145839370 145839674 -57245858 + AluJb SINE Alu 1 306 0 321 261 68 43 chr5 145839719 145839880 -57245652 - L1ME3A LINE L1 -88 6082 5918 314 140 18 0 chr5 145840178 145840235 -57245297 + MER46A DNA MER2_type 1 58 -178 35 0 0 0 chr5 145840236 145840271 -57245261 + AT_rich Low_complexity Low_complexity 1 35 0 644 213 8 8 chr5 145840272 145840394 -57245138 - FLAM_A SINE Alu -11 122 1 843 200 17 11 chr5 145840397 145840577 -57244955 + MER46A DNA MER2_type 56 236 0 255 264 55 33 chr5 145840599 145840690 -57244842 - MIR SINE MIR -52 210 118 1366 181 0 4 chr5 145840693 145840919 -57244613 + AluJb SINE Alu 87 311 -1 183 80 0 0 chr5 145840927 145840952 -57244580 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1712 173 43 0 chr5 145842039 145842317 -57243215 + AluJo SINE Alu 1 290 -22 504 345 161 13 chr5 145843112 145843639 -57241893 + L2 LINE L2 1722 2326 -988 273 229 162 38 chr5 145844377 145844482 -57241050 + L2 LINE L2 3192 3309 -4 226 264 28 38 chr5 145845203 145845309 -57240223 - 7SK RNA RNA -87 106 2 348 204 194 0 chr5 145845326 145845429 -57240103 - MIR SINE MIR -70 192 70 2336 89 3 0 chr5 145845530 145845821 -57239711 - AluSq SINE Alu -21 292 1 22 0 0 0 chr5 145846157 145846179 -57239353 + AT_rich Low_complexity Low_complexity 1 22 0 566 120 0 0 chr5 145846187 145846262 -57239270 - AluS SINE Alu -234 79 5 432 143 0 0 chr5 145846503 145846580 -57238952 - AluS SINE Alu -1 308 232 3570 122 71 79 chr5 145846769 145847545 -57237987 - LTR1 LTR ERV1 0 785 16 1900 145 14 0 chr5 145848266 145848556 -57236976 + AluSx SINE Alu 1 294 -18 2290 103 0 0 chr5 145848776 145849077 -57236455 - AluSq SINE Alu -12 301 1 2205 113 3 25 chr5 145849078 145849397 -57236135 - AluSx SINE Alu 0 312 1 866 293 144 0 chr5 145849467 145849952 -57235580 - L2 LINE L2 -47 3266 2729 2363 82 0 16 chr5 145850409 145850713 -57234819 + AluSx SINE Alu 1 299 -13 2286 84 10 0 chr5 145851102 145851398 -57234134 + AluY SINE Alu 1 299 -12 1837 166 3 14 chr5 145852143 145852438 -57233094 + AluJb SINE Alu 1 292 -20 28 0 0 0 chr5 145852438 145852466 -57233066 + AT_rich Low_complexity Low_complexity 1 28 0 272 174 12 35 chr5 145852501 145852587 -57232945 + (TA)n Simple_repeat Simple_repeat 2 85 0 806 248 80 69 chr5 145852642 145853078 -57232454 - L1ME LINE L1 -412 5758 5318 2450 76 3 0 chr5 145853373 145853677 -57231855 + AluY SINE Alu 1 305 -6 301 250 68 64 chr5 145853747 145853983 -57231549 - L1ME LINE L1 -1332 4814 4578 814 184 61 20 chr5 145854053 145854298 -57231234 - L1MC5 LINE L1 -54 7907 7653 279 211 29 96 chr5 145854376 145854480 -57231052 - L1ME3A LINE L1 -112 6058 5962 766 284 81 21 chr5 145854536 145855008 -57230524 - L1ME3A LINE L1 -208 5962 5463 393 284 74 14 chr5 145855412 145855560 -57229972 - Charlie7 DNA MER1_type -2455 157 1 24 0 0 0 chr5 145855704 145855728 -57229804 + AT_rich Low_complexity Low_complexity 1 24 0 772 150 0 50 chr5 145855883 145856023 -57229509 - FLAM_C SINE Alu 0 133 1 2185 81 10 20 chr5 145857829 145858127 -57227405 + AluY SINE Alu 1 295 -16 445 214 143 97 chr5 145858128 145858324 -57227208 + MIR SINE MIR 38 242 -20 638 269 134 62 chr5 145858794 145859473 -57226059 + HAL1 LINE L1 581 1308 -1199 189 0 0 0 chr5 145859517 145859538 -57225994 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1772 99 56 0 chr5 145859698 145859950 -57225582 + AluSg SINE Alu 36 301 -9 249 208 56 14 chr5 145860040 145860112 -57225420 + HAL1 LINE L1 2078 2152 -355 185 291 73 0 chr5 145860227 145860282 -57225250 + MIR SINE MIR 60 118 -90 2167 117 7 7 chr5 145861357 145861657 -57223875 + AluSx SINE Alu 1 300 -12 223 281 0 0 chr5 145861796 145861853 -57223679 + MIR SINE MIR 186 242 -20 4357 108 20 27 chr5 145861895 145862577 -57222955 - L1PA15 LINE L1 -3 6162 5484 1995 123 20 3 chr5 145862577 145862870 -57222662 - AluSx SINE Alu -14 298 1 4357 108 20 27 chr5 145862870 145862893 -57222639 - L1PA15 LINE L1 -681 5484 5462 757 247 17 28 chr5 145862913 145863091 -57222441 + MER5A DNA MER1_type 14 189 0 236 156 89 0 chr5 145863356 145863401 -57222131 - L2 LINE L2 -1 3312 3264 2119 201 99 6 chr5 145863902 145864435 -57221097 - MER119 DNA MER1_type 0 583 1 1155 109 0 71 chr5 145865315 145865499 -57220033 - AluSx SINE Alu -13 299 129 1066 108 32 21 chr5 145865522 145865708 -57219824 - L1PB2 LINE L1 -8 6143 5956 1072 117 0 0 chr5 145865710 145865847 -57219685 - AluSx SINE Alu -175 137 1 22 56 0 0 chr5 145865922 145865958 -57219574 + AT_rich Low_complexity Low_complexity 1 36 0 544 324 117 25 chr5 145865997 145866518 -57219014 + L2 LINE L2 1542 2110 -1204 261 362 130 30 chr5 145866660 145866713 -57218819 + L2 LINE L2 2461 2507 -807 2348 88 7 0 chr5 145866713 145867021 -57218511 - AluSq SINE Alu -3 310 1 261 362 130 30 chr5 145867021 145867398 -57218134 + L2 LINE L2 2507 2934 -380 771 256 5 35 chr5 145869054 145869253 -57216279 + MER58A DNA MER1_type 3 195 -29 333 272 128 44 chr5 145869266 145869516 -57216016 + HAL1 LINE L1 1115 1385 -1122 821 131 31 8 chr5 145870200 145870330 -57215202 + FLAM_A SINE Alu 1 133 0 1835 116 49 0 chr5 145871469 145871753 -57213779 - MER1B DNA MER1_type 0 339 42 1782 179 0 10 chr5 145872666 145872962 -57212570 + AluSx SINE Alu 1 293 -19 2125 100 14 3 chr5 145873405 145873694 -57211838 - AluSx SINE Alu -20 292 1 1603 157 62 11 chr5 145874261 145874535 -57210997 - AluJb SINE Alu -24 288 1 299 280 60 50 chr5 145875465 145875604 -57209928 - MIR SINE MIR -41 167 37 2089 99 42 0 chr5 145875802 145876085 -57209447 + AluSx SINE Alu 1 295 -17 26 50 0 0 chr5 145876559 145876599 -57208933 + AT_rich Low_complexity Low_complexity 1 40 0 2174 111 0 0 chr5 145876789 145877077 -57208455 + AluSx SINE Alu 1 288 -24 201 39 0 0 chr5 145879217 145879243 -57206289 + (T)n Simple_repeat Simple_repeat 1 26 0 546 175 117 0 chr5 145880343 145880446 -57205086 + AluSg SINE Alu 2 116 -194 415 219 98 8 chr5 145880547 145880670 -57204862 - MER3 DNA MER1_type -53 156 23 721 215 21 11 chr5 145880713 145880904 -57204628 + MER20 DNA MER1_type 1 193 -26 557 152 0 71 chr5 145881653 145881765 -57203767 + FRAM SINE Alu 56 159 -17 713 172 8 23 chr5 145882998 145883126 -57202406 + FLAM_A SINE Alu 1 126 -7 2214 115 0 0 chr5 145883132 145883428 -57202104 + AluSg SINE Alu 1 296 -14 423 276 8 0 chr5 145883698 145883832 -57201700 + HAL1 LINE L1 1500 1634 -873 576 219 200 58 chr5 145884058 145884318 -57201214 - L2 LINE L2 -3 3310 3014 1876 121 197 43 chr5 145884341 145884532 -57201000 - MSTA LTR MaLR 0 428 268 2178 119 7 0 chr5 145884532 145884827 -57200705 - AluSx SINE Alu -15 297 1 1876 121 197 43 chr5 145884827 145885006 -57200526 - MSTA LTR MaLR -160 268 1 242 286 0 16 chr5 145885102 145885165 -57200367 + L2 LINE L2 3235 3296 -17 350 303 82 53 chr5 145885545 145885753 -57199779 + HAL1 LINE L1 2251 2464 -43 508 301 38 58 chr5 145885835 145886234 -57199298 + L1M3d LINE L1 1 391 -5500 1508 245 84 38 chr5 145886402 145886675 -57198857 + L1MB2 LINE L1 600 859 -5444 2076 138 3 3 chr5 145886675 145886972 -57198560 + AluSx SINE Alu 1 297 -15 1508 245 84 38 chr5 145886972 145887075 -57198457 + L1MB2 LINE L1 859 956 -5347 2199 75 20 20 chr5 145887075 145887367 -57198165 - AluSc SINE Alu -17 292 1 1508 245 84 38 chr5 145887367 145887771 -57197761 + L1MB2 LINE L1 956 1787 -4516 4901 192 26 35 chr5 145887780 145888678 -57196854 + L1MB2 LINE L1 3961 4866 -1541 748 188 0 0 chr5 145888678 145888811 -57196721 + FLAM_C SINE Alu 1 133 0 4901 192 26 35 chr5 145888811 145890364 -57195168 + L1MB2 LINE L1 4866 6397 -10 357 308 26 0 chr5 145891804 145891921 -57193611 + MIR SINE MIR 70 189 -73 2350 87 0 3 chr5 145892061 145892361 -57193171 + AluSc SINE Alu 1 299 -10 1214 101 63 164 chr5 145893808 145893863 -57191669 - L1MB2 LINE L1 0 6171 6112 1602 163 38 21 chr5 145893863 145894152 -57191380 - AluJo SINE Alu -18 294 1 1962 168 0 0 chr5 145894152 145894450 -57191082 - AluSx SINE Alu -12 300 3 1214 101 63 164 chr5 145894450 145894760 -57190772 - L1MB2 LINE L1 -57 6114 5842 * 4598 116 69 38 chr5 145894759 145895300 -57190232 + L1MA1 LINE L1 4592 5114 -1188 2183 111 0 0 chr5 145895300 145895602 -57189930 + AluSc SINE Alu 1 302 0 4598 116 69 38 chr5 145895602 145895638 -57189894 + L1MA1 LINE L1 5114 5147 -1155 2507 57 0 3 chr5 145895638 145895935 -57189597 + AluY SINE Alu 1 296 -15 4598 116 69 38 chr5 145895935 145896509 -57189023 + L1MA1 LINE L1 5147 5701 -601 2046 136 13 3 chr5 145896509 145896810 -57188722 + AluJb SINE Alu 1 304 -8 4598 116 69 38 chr5 145896810 145897269 -57188263 + L1MA1 LINE L1 5701 6302 0 2329 93 0 10 chr5 145897281 145897583 -57187949 + AluSx SINE Alu 1 299 -13 2503 78 13 0 chr5 145897594 145897903 -57187629 + AluSp SINE Alu 1 313 0 1564 186 36 74 chr5 145897929 145898536 -57186996 - L1MB2 LINE L1 -454 5858 5323 1870 159 7 0 chr5 145898536 145898825 -57186707 - AluJb SINE Alu -21 291 1 1638 161 11 4 chr5 145898846 145899113 -57186419 - AluJb SINE Alu -25 287 19 45 75 0 0 chr5 145899164 145899258 -57186274 + AT_rich Low_complexity Low_complexity 1 94 0 1034 250 58 41 chr5 145899463 145899827 -57185705 - MLT1E LTR MaLR -182 411 42 759 242 106 57 chr5 145899834 145900310 -57185222 + MLT1G1 LTR MaLR 2 595 0 479 247 116 55 chr5 145900312 145900736 -57184796 + L1ME LINE L1 3866 4262 -1900 1265 177 117 23 chr5 145900736 145901002 -57184530 + AluJb SINE Alu 3 293 -19 479 247 116 55 chr5 145901002 145901724 -57183808 + L1ME LINE L1 4262 5135 -1027 2190 129 0 0 chr5 145901724 145902018 -57183514 + AluSx SINE Alu 1 294 -18 479 247 116 55 chr5 145902018 145902407 -57183125 + L1ME LINE L1 5135 5498 -664 235 292 88 0 chr5 145903033 145903170 -57182362 - L1M LINE L1 -759 5405 5257 2111 104 0 27 chr5 145903335 145903634 -57181898 + AluSx SINE Alu 20 310 -2 454 265 65 0 chr5 145903672 145903857 -57181675 - L1M4 LINE L1 -2570 3576 3380 2045 102 0 0 chr5 145903912 145904178 -57181354 + AluY SINE Alu 45 310 -1 291 175 0 0 chr5 145904178 145904235 -57181297 + (TA)n Simple_repeat Simple_repeat 1 57 0 226 292 0 0 chr5 145904237 145904326 -57181206 + L1MC4 LINE L1 6614 6702 -1340 209 184 37 0 chr5 145904327 145904436 -57181096 + (TA)n Simple_repeat Simple_repeat 2 114 0 1348 185 70 26 chr5 145904448 145904718 -57180814 + AluJo SINE Alu 1 282 -30 499 101 0 0 chr5 145904826 145904895 -57180637 - AluSc SINE Alu -110 199 131 556 289 21 18 chr5 145904995 145905238 -57180294 - L1M4 LINE L1 -3325 2821 2575 477 0 0 0 chr5 145905238 145905291 -57180241 + (TG)n Simple_repeat Simple_repeat 1 53 0 556 289 21 18 chr5 145905291 145905327 -57180205 - L1M4 LINE L1 -3571 2575 2541 * 794 287 22 25 chr5 145905318 145905642 -57179890 + L1MEc LINE L1 20 342 -6054 1301 239 90 67 chr5 145905642 145905813 -57179719 + L1M4 LINE L1 3579 3745 -2401 2410 81 0 3 chr5 145905813 145906122 -57179410 + AluY SINE Alu 1 308 -3 1301 239 90 67 chr5 145906122 145906482 -57179050 + L1M4 LINE L1 3745 4095 -2051 1652 156 74 11 chr5 145906482 145906752 -57178780 - AluJb SINE Alu -25 287 1 1301 239 90 67 chr5 145906752 145906820 -57178712 + L1M4 LINE L1 4095 4160 -1986 1953 85 3 32 chr5 145906820 145907129 -57178403 + AluY SINE Alu 31 311 0 1301 239 90 67 chr5 145907129 145907284 -57178248 + L1M4 LINE L1 4160 4352 -1794 396 240 116 1 chr5 145907298 145907449 -57178083 + L1P4 LINE L1 5333 5507 -658 1022 229 107 28 chr5 145907602 145908017 -57177515 - MLT1C LTR MaLR 0 467 11 2236 92 20 0 chr5 145908092 145908395 -57177137 - AluSq SINE Alu -2 311 3 260 282 86 37 chr5 145908715 145908878 -57176654 + MLT1J LTR MaLR 31 201 -310 189 0 0 0 chr5 145911288 145911309 -57174223 + (T)n Simple_repeat Simple_repeat 1 21 0 32 26 0 0 chr5 145911362 145911401 -57174131 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 145912696 145912718 -57172814 + AT_rich Low_complexity Low_complexity 1 22 0 1679 185 21 3 chr5 145913228 145913514 -57172018 + AluJb SINE Alu 2 292 -20 1800 178 0 16 chr5 145913528 145913831 -57171701 + AluJo SINE Alu 1 298 -14 2289 100 0 3 chr5 145913863 145914163 -57171369 - AluSp SINE Alu -14 299 1 2159 108 13 16 chr5 145915173 145915479 -57170053 + AluSx SINE Alu 1 305 -7 936 160 0 0 chr5 145917019 145917163 -57168369 - FAM SINE Alu -14 171 28 769 234 9 45 chr5 145917429 145917651 -57167881 + MER58C DNA MER1_type 1 214 -1 957 197 49 45 chr5 145917667 145917738 -57167794 + MER58A DNA MER1_type 1 70 -2350 2418 38 0 67 chr5 145917738 145918054 -57167478 + AluY SINE Alu 1 295 -16 957 197 49 45 chr5 145918054 145918205 -57167327 + MER58A DNA MER1_type 70 224 0 1853 148 17 0 chr5 145919650 145919940 -57165592 - AluJo SINE Alu -17 295 1 188 286 79 0 chr5 145920400 145920463 -57165069 + MIR SINE MIR 87 154 -108 21 0 0 0 chr5 145920770 145920791 -57164741 + AT_rich Low_complexity Low_complexity 1 21 0 499 310 19 13 chr5 145920880 145921038 -57164494 - MER5A DNA MER1_type 0 189 31 240 35 0 0 chr5 145922016 145922045 -57163487 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 263 176 0 0 chr5 145923334 145923385 -57162147 - AluSp/q SINE Alu -2 301 251 1438 136 5 9 chr5 145923435 145923648 -57161884 - AluSx SINE Alu -57 255 44 279 252 122 37 chr5 145923656 145923763 -57161769 - MIR SINE MIR -113 149 34 1896 151 20 0 chr5 145924326 145924618 -57160914 - AluJb SINE Alu -14 298 1 2486 93 0 0 chr5 145925857 145926167 -57159365 + AluSx SINE Alu 1 310 -2 259 361 208 7 chr5 145926213 145926482 -57159050 + L2 LINE L2 2435 2757 -557 377 299 36 42 chr5 145926588 145926755 -57158777 + MIR SINE MIR 97 262 0 230 299 52 82 chr5 145926802 145926936 -57158596 + L2 LINE L2 2924 3053 -219 408 325 67 69 chr5 145928162 145928188 -57157344 + L2 LINE L2 2514 2539 -775 1919 166 0 0 chr5 145928188 145928353 -57157179 - AluSx SINE Alu -11 301 134 2088 103 38 0 chr5 145928353 145928644 -57156888 - AluSp SINE Alu -11 302 1 1919 166 0 0 chr5 145928644 145928779 -57156753 - AluSx SINE Alu -177 135 1 408 325 67 69 chr5 145928779 145929143 -57156389 + L2 LINE L2 2539 2903 -411 361 339 63 8 chr5 145929136 145929263 -57156269 + L2 LINE L2 3180 3313 0 * 225 0 0 0 chr5 145930895 145930920 -57154612 + (TG)n Simple_repeat Simple_repeat 2 26 0 966 193 130 14 chr5 145930991 145931214 -57154318 - AluJo SINE Alu -21 291 43 381 256 0 0 chr5 145933202 145933292 -57152240 + HsTC2 DNA Tc2 29 118 -1780 1558 218 88 74 chr5 145933319 145933924 -57151608 + HsTC2 DNA Tc2 1286 1898 0 278 257 119 10 chr5 145934525 145934626 -57150906 + MIR3 SINE MIR 91 202 -6 26 50 0 0 chr5 145934899 145934939 -57150593 + AT_rich Low_complexity Low_complexity 1 40 0 506 291 25 6 chr5 145935012 145935170 -57150362 + MIR SINE MIR 102 262 0 1883 141 0 27 chr5 145936703 145937002 -57148530 + AluJb SINE Alu 1 291 -21 294 68 0 0 chr5 145937112 145937156 -57148376 - MADE1 DNA Mariner -36 44 1 2397 39 42 0 chr5 145937352 145937636 -57147896 + AluY SINE Alu 1 296 -15 1096 61 0 0 chr5 145938035 145938167 -57147365 - AluY SINE Alu -179 132 1 305 258 22 96 chr5 145938218 145938396 -57147136 + MIR SINE MIR 95 259 -3 893 198 0 30 chr5 145938849 145939016 -57146516 + FRAM SINE Alu 4 165 -1 248 274 0 0 chr5 145939842 145939926 -57145606 + L1MCc LINE L1 1385 1468 -4955 586 289 75 35 chr5 145940043 145940468 -57145064 + L1MCc LINE L1 2000 2441 -4681 2207 89 3 3 chr5 145940666 145940959 -57144573 - AluY SINE Alu -18 293 1 21 36 0 0 chr5 145941683 145941711 -57143821 + AT_rich Low_complexity Low_complexity 1 28 0 1986 145 0 29 chr5 145942461 145942772 -57142760 - AluSx SINE Alu -10 302 1 289 125 0 0 chr5 145942958 145942998 -57142534 + Tigger2 DNA MER2_type 31 70 -2648 275 207 103 0 chr5 145942999 145943057 -57142475 - MER2 DNA MER2_type 0 345 282 * 793 222 48 6 chr5 145943034 145943201 -57142331 - MER8 DNA MER2_type -62 177 4 716 320 90 53 chr5 145943217 145943545 -57141987 + L1M4 LINE L1 4126 4440 -1706 1843 154 47 22 chr5 145943545 145943909 -57141623 + THE1C LTR MaLR 1 373 -2 716 320 90 53 chr5 145943909 145944056 -57141476 + L1M4 LINE L1 4440 4580 -1566 2200 112 3 7 chr5 145944056 145944352 -57141180 - AluSg SINE Alu -13 297 3 716 320 90 53 chr5 145944352 145944719 -57140813 + L1M4 LINE L1 4580 5000 -1146 413 225 288 12 chr5 145944737 145944897 -57140635 - MIR SINE MIR -44 218 15 26 0 0 0 chr5 145945332 145945358 -57140174 + AT_rich Low_complexity Low_complexity 1 26 0 309 294 119 16 chr5 145946010 145946136 -57139396 - MIR SINE MIR -121 141 3 191 244 0 0 chr5 145946619 145946664 -57138868 + MIR SINE MIR 218 262 0 23 68 0 0 chr5 145947498 145947542 -57137990 + AT_rich Low_complexity Low_complexity 1 44 0 928 191 64 27 chr5 145948383 145948571 -57136961 - MIR SINE MIR -58 204 10 2285 110 0 0 chr5 145948698 145948997 -57136535 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5 145949059 145949081 -57136451 + AT_rich Low_complexity Low_complexity 1 22 0 906 289 48 36 chr5 145949890 145950329 -57135203 - L1ME4a LINE L1 -194 5927 5484 25 0 0 0 chr5 145950779 145950804 -57134728 + AT_rich Low_complexity Low_complexity 1 25 0 1840 160 3 7 chr5 145950913 145951201 -57134331 + AluJb SINE Alu 13 299 -13 207 0 0 0 chr5 145951347 145951370 -57134162 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2543 118 6 3 chr5 145951847 145952204 -57133328 + THE1B LTR MaLR 7 364 0 214 298 53 0 chr5 145952955 145953012 -57132520 + L2 LINE L2 3213 3272 0 1698 179 10 0 chr5 145953151 145953441 -57132091 + AluJb SINE Alu 1 293 -19 2427 68 0 16 chr5 145953447 145953756 -57131776 + AluY SINE Alu 1 304 -7 414 299 16 31 chr5 145954029 145954156 -57131376 - L2 LINE L2 -9 3304 3180 611 200 60 0 chr5 145954246 145954396 -57131136 - MER58 DNA MER1_type -1 2419 2261 25 31 0 0 chr5 145954747 145954779 -57130753 + AT_rich Low_complexity Low_complexity 1 32 0 388 214 101 0 chr5 145955748 145955837 -57129695 + LTR50 LTR ERVL 501 598 -197 289 176 153 53 chr5 145956421 145956552 -57128980 + LTR50 LTR ERVL 625 768 -27 2586 62 0 0 chr5 145957464 145957772 -57127760 - AluY SINE Alu -3 308 1 249 273 68 23 chr5 145959388 145959476 -57126056 + MIR SINE MIR 75 145 -63 1787 115 80 7 chr5 145959584 145959871 -57125661 + AluSx SINE Alu 1 308 -4 437 218 66 20 chr5 145961385 145961641 -57123891 - L1ME4a LINE L1 -1 6120 5678 808 89 0 104 chr5 145961711 145961846 -57123686 + AluSq/x SINE Alu 7 127 -185 1181 121 0 6 chr5 145961848 145962037 -57123495 - AluSg/x SINE Alu 0 311 124 1346 144 0 0 chr5 145962038 145962233 -57123299 - AluSx SINE Alu -117 195 1 306 178 0 136 chr5 145962386 145962504 -57123028 - L1ME4a LINE L1 -992 5367 5266 25 31 0 0 chr5 145963641 145963673 -57121859 + AT_rich Low_complexity Low_complexity 1 32 0 278 254 0 0 chr5 145964265 145964320 -57121212 - L2 LINE L2 -1 3271 3217 1069 184 124 28 chr5 145965542 145965759 -57119773 - MER8 DNA MER2_type 0 239 2 2220 108 0 0 chr5 145965894 145966180 -57119352 - AluSx SINE Alu -26 286 1 2215 95 24 7 chr5 145966330 145966626 -57118906 - AluSp SINE Alu -12 301 1 1873 144 0 16 chr5 145966627 145966932 -57118600 - AluJb SINE Alu -12 300 1 273 297 0 0 chr5 145967655 145967719 -57117813 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 1474 184 43 18 chr5 145967722 145968004 -57117528 - AluJo SINE Alu -23 289 1 219 364 84 7 chr5 145968141 145968295 -57117237 - L2 LINE L2 -187 3085 2920 2277 107 0 0 chr5 145968468 145968767 -57116765 + AluSx SINE Alu 1 299 -13 2347 71 17 3 chr5 145969220 145969514 -57116018 + AluY SINE Alu 1 298 -13 2266 92 34 0 chr5 145969624 145969916 -57115616 - AluSc SINE Alu -7 302 1 329 301 94 24 chr5 145969996 145970209 -57115323 + L1MC4a LINE L1 5622 5849 -1959 1835 161 7 3 chr5 145970343 145970628 -57114904 - AluJo SINE Alu -26 286 1 372 369 76 29 chr5 145970904 145971218 -57114314 - L1MDa LINE L1 -6210 330 2 364 290 279 30 chr5 145971825 145972122 -57113410 - HAL1 LINE L1 -1130 1377 1007 730 91 0 0 chr5 145972128 145972227 -57113305 - AluY SINE Alu -9 302 204 2049 76 150 193 chr5 145972426 145973083 -57112449 - LTR12 LTR ERV1 -133 2032 57 287 196 0 0 chr5 145973084 145973135 -57112397 - LTR30 LTR ERV1 -671 51 1 204 289 0 0 chr5 145973778 145973830 -57111702 - MIR SINE MIR -135 127 76 280 274 80 0 chr5 145975145 145975258 -57110274 + L1ME4a LINE L1 5971 6092 -29 400 332 76 49 chr5 145975654 145976061 -57109471 + HAL1 LINE L1 1152 1569 -938 589 216 60 8 chr5 145976577 145976711 -57108821 - MER20 DNA MER1_type -34 185 45 184 214 0 89 chr5 145976850 145976906 -57108626 - MER5A DNA MER1_type -129 60 10 * 186 216 0 149 chr5 145976896 145976928 -57108604 + MER5B DNA MER1_type 11 28 -150 2029 107 40 67 chr5 145976928 145977274 -57108258 + MER1B DNA MER1_type 1 337 0 186 216 0 149 chr5 145977274 145977315 -57108217 + MER5B DNA MER1_type 28 73 -105 2343 64 0 0 chr5 145978444 145978765 -57106767 - AluY SINE Alu 0 321 1 450 299 79 17 chr5 145979453 145979630 -57105902 - MIR SINE MIR -11 251 64 1995 105 7 14 chr5 145980412 145980751 -57104781 + AluSg SINE Alu 1 337 0 674 173 23 23 chr5 145981461 145981594 -57103938 + FLAM_A SINE Alu 1 133 0 4385 164 48 40 chr5 145981746 145982977 -57102555 - L1MB5 LINE L1 0 6174 4931 224 39 59 39 chr5 145984394 145984445 -57101087 + GA-rich Low_complexity Low_complexity 2 53 0 2229 107 0 7 chr5 145984698 145985008 -57100524 + AluSq SINE Alu 1 308 -5 2278 106 0 0 chr5 145985295 145985598 -57099934 - AluSg SINE Alu -7 303 1 21 0 0 0 chr5 145985599 145985620 -57099912 + AT_rich Low_complexity Low_complexity 1 21 0 323 348 87 43 chr5 145986086 145986293 -57099239 + L2 LINE L2 3056 3271 -1 315 125 0 0 chr5 145986373 145986421 -57099111 + AluSx SINE Alu 1 48 -251 * 351 175 0 0 chr5 145986417 145986474 -57099058 - AluS SINE Alu -243 57 1 1462 143 20 33 chr5 145986483 145986564 -57098968 + AluSx SINE Alu 58 138 -174 210 37 0 0 chr5 145986564 145986591 -57098941 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1462 143 20 33 chr5 145986591 145986754 -57098778 + AluSx SINE Alu 138 299 -13 2217 213 173 45 chr5 145987107 145988199 -57097333 + L1MC4 LINE L1 6463 7809 -233 2280 102 0 13 chr5 145988199 145988504 -57097028 - AluSx SINE Alu -11 301 1 2217 213 173 45 chr5 145988504 145988771 -57096761 + L1MC4 LINE L1 7809 8040 -2 241 229 219 0 chr5 145989218 145989314 -57096218 - MIR SINE MIR -42 220 104 2224 107 0 0 chr5 145989586 145989877 -57095655 + AluSg SINE Alu 4 294 -16 861 258 73 9 chr5 145991164 145991397 -57094135 + MIR SINE MIR 1 248 -14 1573 177 42 10 chr5 145991543 145991831 -57093701 - AluJo SINE Alu -15 297 1 512 239 28 0 chr5 145992054 145992163 -57093369 + L2 LINE L2 3151 3262 -10 21 36 0 0 chr5 145992261 145992289 -57093243 + AT_rich Low_complexity Low_complexity 1 28 0 238 260 79 8 chr5 145992436 145992563 -57092969 - L1ME LINE L1 -278 5843 5708 32 86 0 0 chr5 145992567 145992648 -57092884 + AT_rich Low_complexity Low_complexity 1 81 0 383 335 44 0 chr5 145992648 145992830 -57092702 - L1ME LINE L1 -400 5721 5532 21 36 0 0 chr5 145994618 145994646 -57090886 + AT_rich Low_complexity Low_complexity 1 28 0 2416 58 0 0 chr5 145994663 145994955 -57090577 + AluY SINE Alu 1 292 -19 1786 222 73 46 chr5 145995145 145995668 -57089864 + MLT1F LTR MaLR 1 537 -5 1562 186 3 38 chr5 145996883 145997201 -57088331 - AluJb SINE Alu -5 307 1 579 162 30 0 chr5 145997764 145997863 -57087669 - AluJb SINE Alu -3 309 208 1642 176 78 23 chr5 145998078 145998424 -57087108 + MLT1A1 LTR MaLR 1 365 0 1685 137 0 65 chr5 145999127 145999434 -57086098 + AluJb SINE Alu 1 287 -25 444 262 83 11 chr5 145999830 146000173 -57085359 + L1ME LINE L1 596 1049 -5034 1683 121 30 11 chr5 146001448 146001743 -57083789 - AluSx SINE Alu 0 342 43 1628 97 27 8 chr5 146002422 146002680 -57082852 + L1PA16 LINE L1 5895 6157 -9 387 0 0 0 chr5 146003182 146003225 -57082307 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 68 0 0 chr5 146003554 146003598 -57081934 + AT_rich Low_complexity Low_complexity 1 44 0 205 200 47 47 chr5 146003674 146003759 -57081773 + T-rich Low_complexity Low_complexity 2 86 0 2256 85 7 0 chr5 146003801 146004096 -57081436 - AluSp SINE Alu -15 298 2 835 176 0 36 chr5 146004335 146004500 -57081032 + L1ME1 LINE L1 5903 6061 -105 1849 131 0 0 chr5 146004796 146005064 -57080468 - AluSx SINE Alu -5 307 40 1546 176 6 6 chr5 146005646 146005958 -57079574 + MER33 DNA MER1_type 13 324 0 468 0 0 0 chr5 146007242 146007294 -57078238 + (CA)n Simple_repeat Simple_repeat 2 53 0 362 327 87 55 chr5 146008321 146008596 -57076936 + L1MEd LINE L1 556 839 -5280 845 216 37 37 chr5 146008598 146008788 -57076744 - MER58C DNA MER1_type 0 215 26 309 278 140 61 chr5 146008812 146009898 -57075634 + L1MEd LINE L1 840 2053 -4257 * 312 107 18 0 chr5 146009891 146009947 -57075585 + L1MEd LINE L1 2261 2317 -3812 437 125 0 12 chr5 146009954 146010034 -57075498 + (GGGAGA)n Simple_repeat Simple_repeat 1 79 0 1848 160 0 0 chr5 146010035 146010317 -57075215 - AluSx SINE Alu -30 282 1 682 116 36 0 chr5 146010318 146010430 -57075102 + L1MA6 LINE L1 6184 6299 -1 22 0 0 0 chr5 146010430 146010452 -57075080 + AT_rich Low_complexity Low_complexity 1 22 0 652 255 99 28 chr5 146010531 146010954 -57074578 + L1MEd LINE L1 2564 3016 -3113 633 236 42 18 chr5 146011282 146011447 -57074085 - MIR SINE MIR -61 201 33 248 207 126 72 chr5 146011464 146011575 -57073957 - L2 LINE L2 -32 3281 3165 638 292 32 28 chr5 146011660 146011910 -57073622 - MIR SINE MIR -6 256 6 477 261 67 84 chr5 146012720 146012984 -57072548 + L1ME LINE L1 5382 5642 -528 2415 52 0 0 chr5 146013135 146013422 -57072110 + AluY SINE Alu 1 287 -24 449 99 75 12 chr5 146013438 146013766 -57071766 + (TA)n Simple_repeat Simple_repeat 1 348 0 340 231 57 77 chr5 146014106 146014375 -57071157 - L2 LINE L2 -387 2926 1879 2094 116 7 0 chr5 146014595 146014887 -57070645 + AluSx SINE Alu 1 294 -18 1551 160 56 7 chr5 146015030 146015299 -57070233 + AluJo SINE Alu 1 282 -30 1540 132 0 5 chr5 146015303 146015523 -57070009 - AluSg/x SINE Alu -7 303 85 434 291 30 18 chr5 146015599 146015764 -57069768 + HAL1 LINE L1 1473 1639 -868 21 0 0 0 chr5 146017348 146017369 -57068163 + AT_rich Low_complexity Low_complexity 1 21 0 411 21 0 0 chr5 146018567 146018615 -57066917 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 36 0 0 chr5 146021389 146021417 -57064115 + AT_rich Low_complexity Low_complexity 1 28 0 338 216 173 22 chr5 146022813 146022952 -57062580 + L1ME LINE L1 5581 5740 -381 27 0 0 0 chr5 146023074 146023101 -57062431 + AT_rich Low_complexity Low_complexity 1 27 0 561 206 137 69 chr5 146023114 146023211 -57062321 - MER2 DNA MER2_type 0 345 256 1512 191 19 16 chr5 146023211 146023520 -57062012 + AluJb SINE Alu 1 310 -2 561 206 137 69 chr5 146023520 146023624 -57061908 - MER2 DNA MER2_type -89 256 130 1698 158 67 0 chr5 146023624 146023921 -57061611 - MER7A DNA MER2_type 0 346 32 811 181 0 0 chr5 146023936 146024063 -57061469 - MER2 DNA MER2_type -213 132 6 1432 203 25 11 chr5 146025688 146025969 -57059563 + AluJo SINE Alu 2 286 -26 452 168 159 0 chr5 146026283 146026390 -57059142 + FLAM_C SINE Alu 1 124 -9 182 401 53 13 chr5 146026579 146026731 -57058801 - L2 LINE L2 -189 3083 2926 692 214 15 0 chr5 146026925 146027056 -57058476 - FLAM_C SINE Alu 0 133 1 294 223 41 33 chr5 146027097 146027218 -57058314 - Charlie7 DNA MER1_type -50 2562 2441 291 257 191 46 chr5 146027734 146027886 -57057646 - MIR SINE MIR -33 229 56 349 293 10 0 chr5 146028372 146028471 -57057061 - MER3 DNA MER1_type -109 100 1 2533 233 41 32 chr5 146029293 146030070 -57055462 + L1ME1 LINE L1 5325 6108 -58 2222 97 3 0 chr5 146030093 146030383 -57055149 - AluSx SINE Alu -21 291 1 2239 87 3 0 chr5 146031725 146032025 -57053507 + AluY SINE Alu 1 301 -10 2023 140 0 7 chr5 146032910 146033210 -57052322 - AluSg SINE Alu -12 298 1 290 296 164 7 chr5 146034094 146034246 -57051286 - MIR SINE MIR -6 256 81 1126 173 9 14 chr5 146034270 146034484 -57051048 + AluJo SINE Alu 86 298 -14 23 33 0 0 chr5 146034580 146034610 -57050922 + AT_rich Low_complexity Low_complexity 1 30 0 1159 131 193 85 chr5 146034764 146034969 -57050563 - MER44D DNA MER2_type -1882 609 427 733 159 0 0 chr5 146034969 146035095 -57050437 + FLAM_A SINE Alu 4 129 -4 1159 131 193 85 chr5 146035095 146035118 -57050414 - MER44D DNA MER2_type -2064 427 408 1602 80 22 0 chr5 146035118 146035344 -57050188 - L1PA13 LINE L1 -3 6160 5930 1159 131 193 85 chr5 146035344 146035420 -57050112 - MER44D DNA MER2_type -2083 408 1 252 299 26 84 chr5 146036149 146036303 -57049229 + L2 LINE L2 2898 3042 -230 293 273 140 13 chr5 146036542 146036633 -57048899 - MIR SINE MIR -66 196 118 2169 100 3 3 chr5 146036633 146036932 -57048600 + AluSg SINE Alu 1 299 -11 293 273 140 13 chr5 146036932 146036990 -57048542 - MIR SINE MIR -144 118 28 267 297 82 72 chr5 146037578 146037773 -57047759 + L1MEd LINE L1 328 524 -5595 2163 117 0 3 chr5 146037863 146038162 -57047370 - AluSx SINE Alu -14 298 1 752 245 140 22 chr5 146038439 146038717 -57046815 + L1MCc LINE L1 884 1194 -5229 556 239 41 58 chr5 146038762 146039000 -57046532 + L1MCc LINE L1 1299 1559 -5045 22 0 0 0 chr5 146039000 146039022 -57046510 + AT_rich Low_complexity Low_complexity 1 22 0 556 239 41 58 chr5 146039022 146039175 -57046357 + L1MCc LINE L1 1559 1713 -4891 475 304 105 18 chr5 146039434 146039802 -57045730 + L1MCc LINE L1 1957 2539 -4583 2184 103 10 0 chr5 146039927 146040218 -57045314 - AluSx SINE Alu -18 294 1 313 325 24 16 chr5 146040311 146040434 -57045098 + L1MCc LINE L1 2831 2954 -3987 329 339 42 77 chr5 146040516 146040776 -57044756 - L1MC4 LINE L1 -1094 6948 6698 1756 149 50 0 chr5 146041210 146041511 -57044021 - MER7A DNA MER2_type 0 346 33 1451 97 5 0 chr5 146041559 146041745 -57043787 + AluSx SINE Alu 1 187 -125 564 136 0 0 chr5 146041745 146041833 -57043699 + AluSx SINE Alu 217 304 -5 317 116 58 14 chr5 146042360 146042429 -57043103 - FAM SINE Alu 0 175 104 2201 287 105 26 chr5 146042664 146044447 -57041085 - L1M4 LINE L1 -1673 4473 2518 2016 154 0 3 chr5 146044447 146044758 -57040774 + AluSx SINE Alu 1 310 -2 2201 287 105 26 chr5 146044758 146044943 -57040589 - L1M4 LINE L1 -3628 2518 2349 1323 194 97 14 chr5 146044943 146045057 -57040475 + AluJo SINE Alu 1 104 -208 252 59 0 0 chr5 146045057 146045091 -57040441 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1323 194 97 14 chr5 146045091 146045264 -57040268 + AluJo SINE Alu 104 312 0 25 31 0 0 chr5 146045499 146045531 -57040001 + AT_rich Low_complexity Low_complexity 1 32 0 694 251 63 0 chr5 146045570 146045777 -57039755 - L1MC4 LINE L1 -134 7908 7689 359 232 80 45 chr5 146046085 146046197 -57039335 - L2 LINE L2 -8 3264 3149 2153 127 0 7 chr5 146046777 146047085 -57038447 + AluSq SINE Alu 1 306 -7 1688 197 24 3 chr5 146047913 146048248 -57037284 + MER2 DNA MER2_type 2 343 -1 1747 155 7 20 chr5 146048910 146049206 -57036326 - AluJb SINE Alu -20 292 1 860 279 125 59 chr5 146049300 146050222 -57035310 + L1ME1 LINE L1 40 1022 -5374 1759 219 87 49 chr5 146050546 146051267 -57034265 + L1M4 LINE L1 4246 4999 -1147 2041 151 0 3 chr5 146051267 146051571 -57033961 + AluJb SINE Alu 3 305 -7 1759 219 87 49 chr5 146051571 146051604 -57033928 + L1M4 LINE L1 4999 5029 -1117 1183 277 36 16 chr5 146051620 146052119 -57033413 - L1MEc LINE L1 -2130 4085 3577 2125 98 53 3 chr5 146052228 146052513 -57033019 + AluSq SINE Alu 1 299 -14 2077 253 134 12 chr5 146052530 146053729 -57031803 - L1MEc LINE L1 -2816 3399 2085 1560 181 48 10 chr5 146053729 146054022 -57031510 - AluJo SINE Alu -8 304 1 2077 253 134 12 chr5 146054022 146054072 -57031460 - L1MEc LINE L1 -4130 2085 2042 * 4047 223 76 29 chr5 146054070 146055160 -57030372 + L1ME1 LINE L1 4141 5352 -883 2267 119 0 3 chr5 146055160 146055471 -57030061 + AluSx SINE Alu 1 310 -2 4047 223 76 29 chr5 146055471 146056244 -57029288 + L1ME1 LINE L1 5352 6087 -148 225 193 53 0 chr5 146056248 146056305 -57029227 + L1ME LINE L1 3996 4055 -2091 2048 137 10 0 chr5 146056344 146056643 -57028889 - AluSx SINE Alu -10 302 1 929 206 62 85 chr5 146056672 146057198 -57028334 + L1ME LINE L1 4083 4722 -1424 492 219 8 17 chr5 146057446 146057565 -57027967 + LTR7 LTR ERV1 333 450 0 1094 228 81 45 chr5 146057565 146057986 -57027546 + HERVH LTR ERV1 1 436 -7277 3213 201 12 26 chr5 146058074 146058871 -57026661 + HERVH LTR ERV1 802 1240 -5745 25704 182 10 27 chr5 146058899 146064326 -57021206 + HERVH LTR ERV1 1459 6588 -1125 5697 139 128 102 chr5 146064331 146065985 -57019547 - pTR5 LTR ERV1 0 2438 743 5295 190 13 11 chr5 146065990 146067109 -57018423 + HERVH LTR ERV1 6592 7713 0 474 263 7 26 chr5 146067430 146067582 -57017950 + LTR7 LTR ERV1 302 450 0 1718 237 49 26 chr5 146067582 146068217 -57017315 + L1ME LINE L1 4719 5357 -789 515 229 105 0 chr5 146068220 146068373 -57017159 + L1ME LINE L1 5519 5687 -479 499 226 43 12 chr5 146068376 146068540 -57016992 + L1ME1 LINE L1 5618 5786 -380 1687 133 14 18 chr5 146068540 146068826 -57016706 + MER49 LTR ERV1 1 285 -638 1421 205 32 20 chr5 146068886 146069232 -57016300 + MER4D LTR ERV1 554 903 0 801 270 30 50 chr5 146069248 146069611 -57015921 + L1ME1 LINE L1 5806 6161 -5 2336 120 50 55 chr5 146069710 146070354 -57015178 + LTR8A LTR ERV1 1 727 0 261 150 11 116 chr5 146070370 146070499 -57015033 + L1M1 LINE L1 5318 5433 -732 438 20 0 0 chr5 146070691 146070742 -57014790 + (CATA)n Simple_repeat Simple_repeat 2 52 0 522 144 21 10 chr5 146070754 146070851 -57014681 + MER4A LTR ERV1 1 98 -566 1643 131 3 61 chr5 146070851 146070945 -57014587 + MER4A LTR ERV1 261 359 -305 2291 99 0 0 chr5 146070945 146071247 -57014285 + AluSq SINE Alu 1 302 -11 1643 131 3 61 chr5 146071247 146071519 -57014013 + MER4A LTR ERV1 359 664 0 858 265 68 37 chr5 146071527 146071772 -57013760 + L1ME3A LINE L1 5121 5357 -805 1745 155 81 0 chr5 146071772 146072043 -57013489 + AluSx SINE Alu 1 293 -19 858 265 68 37 chr5 146072043 146072285 -57013247 + L1ME3A LINE L1 5357 5628 -534 1888 200 24 0 chr5 146072285 146072620 -57012912 + MER61A LTR ERV1 1 343 0 858 265 68 37 chr5 146072620 146072721 -57012811 + L1ME3A LINE L1 5628 5724 -438 287 285 58 48 chr5 146072776 146072983 -57012549 + L1ME3A LINE L1 5961 6169 -1 1314 131 353 0 chr5 146072992 146073329 -57012203 + MER39 LTR ERV1 1 456 -251 1162 102 5 54 chr5 146073327 146073532 -57012000 - MER4A LTR ERV1 -469 195 1 * 563 286 106 17 chr5 146073546 146073847 -57011685 + MERVL LTR ERVL 4808 5135 -350 1917 142 4 0 chr5 146073873 146074177 -57011355 + AluSx SINE Alu 11 315 0 2025 145 10 0 chr5 146074192 146074482 -57011050 + AluSx SINE Alu 1 293 -19 343 284 91 10 chr5 146074482 146074679 -57010853 + MERVL LTR ERVL 5168 5380 -384 510 218 28 21 chr5 146075005 146075147 -57010385 + LTR41 LTR ERVL 18 160 -613 1871 152 26 10 chr5 146075520 146075823 -57009709 + AluSx SINE Alu 1 308 -4 221 293 47 28 chr5 146075875 146075981 -57009551 - MIR SINE MIR -6 256 149 822 221 108 22 chr5 146076775 146076997 -57008535 - MIR SINE MIR -3 259 19 410 313 170 0 chr5 146077036 146077183 -57008349 - MIR SINE MIR -80 182 11 2246 105 7 0 chr5 146077261 146077556 -57007976 - AluSp SINE Alu -16 297 1 8863 118 16 78 chr5 146078844 146080518 -57005014 + MSTA-int LTR MaLR 10 1580 0 1757 151 144 26 chr5 146080518 146080901 -57004631 + MSTA LTR MaLR 1 428 0 1210 187 42 128 chr5 146080910 146081300 -57004232 + L1MA6 LINE L1 3313 3606 -3959 2090 139 0 3 chr5 146081300 146081601 -57003931 + AluSx SINE Alu 1 300 -12 1210 187 42 128 chr5 146081601 146081961 -57003571 + L1MA6 LINE L1 3606 3995 -3570 4993 175 53 10 chr5 146081965 146083445 -57002087 + L1MA6 LINE L1 6148 7719 0 311 288 91 14 chr5 146083573 146084020 -57001512 + L1ME3 LINE L1 1035 1625 -4757 717 212 20 90 chr5 146084133 146084388 -57001144 + L1ME3 LINE L1 4701 4937 -1445 2112 113 0 49 chr5 146084458 146084785 -57000747 + AluSx SINE Alu 1 311 -1 357 197 7 99 chr5 146084900 146085052 -57000480 + L1ME3 LINE L1 5037 5174 -1208 1579 220 135 10 chr5 146085069 146085668 -56999864 + Charlie1 DNA MER1_type 1914 2587 -174 2145 98 0 0 chr5 146085669 146085943 -56999589 + AluSx SINE Alu 1 274 -38 288 77 0 0 chr5 146085958 146085997 -56999535 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 25 51 0 0 chr5 146086013 146086052 -56999480 + AT_rich Low_complexity Low_complexity 1 39 0 314 259 59 75 chr5 146086053 146086299 -56999233 + L1ME3 LINE L1 5180 5428 -972 663 214 56 0 chr5 146086299 146086425 -56999107 + FLAM_A SINE Alu 1 133 0 2400 84 0 3 chr5 146086425 146086733 -56998799 + AluSq SINE Alu 1 307 -6 314 259 59 75 chr5 146086733 146087075 -56998457 + L1ME3 LINE L1 5427 5793 -607 2440 73 0 7 chr5 146087075 146087376 -56998156 + AluY SINE Alu 1 299 -12 314 259 59 75 chr5 146087376 146087430 -56998102 + L1ME3 LINE L1 5793 5846 -554 1265 130 19 19 chr5 146087440 146087656 -56997876 - Tigger3(Golem) DNA MER2_type -1 3028 2813 240 179 0 0 chr5 146087654 146087693 -56997839 - Tigger3(Golem) DNA MER2_type -2988 41 3 * 683 246 174 30 chr5 146087696 146087802 -56997730 + L1ME3 LINE L1 5864 5953 -445 2042 143 0 0 chr5 146087802 146088117 -56997415 + AluSq SINE Alu 1 313 0 683 246 174 30 chr5 146088117 146088470 -56997062 + L1ME3 LINE L1 5953 6389 -9 249 330 11 0 chr5 146088948 146089036 -56996496 + L2 LINE L2 3184 3272 0 29 47 0 0 chr5 146089146 146089189 -56996343 + AT_rich Low_complexity Low_complexity 1 43 0 302 268 109 36 chr5 146089582 146089720 -56995812 - MIR SINE MIR -41 221 74 364 289 91 0 chr5 146089780 146089901 -56995631 + L2 LINE L2 3182 3313 0 251 222 48 32 chr5 146090355 146090418 -56995114 - L3 LINE CR1 -421 1156 1093 817 66 0 0 chr5 146090720 146090826 -56994706 + L1PA5 LINE L1 6046 6151 -3 2559 80 0 0 chr5 146091072 146091383 -56994149 + AluY SINE Alu 1 311 0 1748 152 30 20 chr5 146091404 146091706 -56993826 + AluJb SINE Alu 1 305 -7 322 307 150 20 chr5 146091735 146091888 -56993644 + HAL1 LINE L1 2 174 -2333 612 287 22 6 chr5 146091895 146092076 -56993456 + MLT1G1 LTR MaLR 1 184 -411 1027 279 70 45 chr5 146092296 146093155 -56992377 + HERV16 LTR ERVL 2028 2368 -2628 268 229 33 74 chr5 146093156 146093278 -56992254 + L1MEc LINE L1 36 152 -6244 510 254 30 8 chr5 146093322 146093456 -56992076 + MER20 DNA MER1_type 2 138 -81 * 797 216 0 0 chr5 146093451 146093599 -56991933 + MER58B DNA MER1_type 191 338 -3 694 181 0 38 chr5 146093624 146093757 -56991775 - MER68 LTR ERV1 -429 133 6 1076 155 26 94 chr5 146093875 146094140 -56991392 + MSTB1 LTR MaLR 1 247 -185 1390 132 12 80 chr5 146094160 146094411 -56991121 - AluJo SINE Alu -78 234 1 932 144 52 26 chr5 146094412 146094606 -56990926 + MSTB1 LTR MaLR 234 432 0 1395 324 65 50 chr5 146094606 146096002 -56989530 + HERV16 LTR ERVL 3531 5323 -441 332 292 42 52 chr5 146095985 146096177 -56989355 + HERV16 LTR ERVL 4801 4990 -6 * 1011 311 85 2 chr5 146096187 146096612 -56988920 + LTR16B LTR ERVL 4 463 -1 289 273 62 53 chr5 146096618 146096711 -56988821 - L1M4 LINE L1 -1679 4467 4376 1996 148 0 10 chr5 146096711 146097001 -56988531 + AluSx SINE Alu 1 287 -25 289 273 62 53 chr5 146097001 146097229 -56988303 - L1M4 LINE L1 -1770 4376 4143 462 181 24 0 chr5 146097264 146097347 -56988185 + MER47A DNA MER2_type 2 86 -280 987 184 5 5 chr5 146097354 146097539 -56987993 - AluJo SINE Alu -8 304 120 1674 133 18 11 chr5 146097566 146097851 -56987681 + MER47A DNA MER2_type 80 366 0 2182 90 0 0 chr5 146098452 146098730 -56986802 + AluY SINE Alu 1 278 -33 853 196 58 6 chr5 146098809 146098982 -56986550 - MER58A DNA MER1_type 0 224 43 731 278 87 52 chr5 146099127 146099284 -56986248 + LTR67 LTR ERVL 110 260 -297 1859 109 133 77 chr5 146099284 146099323 -56986209 - MSTA LTR MaLR 0 428 393 2315 128 0 0 chr5 146099323 146099635 -56985897 + AluSx SINE Alu 1 312 0 1859 109 133 77 chr5 146099635 146100000 -56985532 - MSTA LTR MaLR -35 393 1 731 278 87 52 chr5 146100000 146100266 -56985266 + LTR67 LTR ERVL 260 548 -9 947 191 0 6 chr5 146100272 146100440 -56985092 + MER5A DNA MER1_type 23 189 0 2019 121 7 14 chr5 146100940 146101237 -56984295 + AluSx SINE Alu 1 295 -17 1446 171 98 0 chr5 146101962 146102226 -56983306 - AluJb SINE Alu -20 292 3 653 210 0 8 chr5 146102484 146102608 -56982924 + FLAM_A SINE Alu 1 123 -10 297 276 0 86 chr5 146102646 146102751 -56982781 + MIR SINE MIR 28 123 -139 1234 96 0 0 chr5 146102784 146102940 -56982592 - AluSq SINE Alu -23 290 135 981 80 0 8 chr5 146102940 146103065 -56982467 + AluSq/x SINE Alu 9 132 -180 1897 264 92 19 chr5 146103293 146103670 -56981862 + L1MC4 LINE L1 6761 7109 -933 1912 155 0 23 chr5 146103670 146103979 -56981553 + AluSx SINE Alu 1 302 -10 1897 264 92 19 chr5 146103979 146104453 -56981079 + L1MC4 LINE L1 7109 7674 -368 2024 79 7 24 chr5 146104509 146104799 -56980733 + L1PA7 LINE L1 5866 6150 -4 790 267 76 5 chr5 146105140 146105350 -56980182 + MIR SINE MIR 16 240 -22 471 338 29 39 chr5 146105447 146105755 -56979777 + L2 LINE L2 2063 2367 -947 2060 149 0 3 chr5 146105901 146106209 -56979323 - AluSx SINE Alu -1 311 5 260 325 102 34 chr5 146106246 146106452 -56979080 + L2 LINE L2 2757 2976 -338 1656 177 20 40 chr5 146106476 146106605 -56978927 + MER2 DNA MER2_type 2 132 -212 1787 140 32 39 chr5 146106605 146106913 -56978619 - AluJb SINE Alu -6 306 1 1656 177 20 40 chr5 146106913 146107133 -56978399 + MER2 DNA MER2_type 132 344 0 203 167 0 136 chr5 146107972 146108038 -56977494 + MIR3 SINE MIR 136 192 -16 216 0 0 0 chr5 146108381 146108405 -56977127 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2376 84 3 7 chr5 146108799 146109107 -56976425 - AluSp SINE Alu -6 307 1 275 308 161 70 chr5 146109125 146109424 -56976108 - L2 LINE L2 -2 3270 2945 242 301 295 0 chr5 146109440 146109596 -56975936 - MIR SINE MIR -8 254 53 559 213 120 0 chr5 146109835 146109972 -56975560 + FLAM_A SINE Alu 1 150 0 349 274 67 22 chr5 146109977 146110156 -56975376 + L1ME3 LINE L1 5916 6102 -60 1210 62 0 0 chr5 146110163 146110308 -56975224 + AluSp SINE Alu 1 145 -168 2257 102 7 0 chr5 146110308 146110612 -56974920 + AluSq SINE Alu 5 310 -3 198 229 71 29 chr5 146110766 146110836 -56974696 + L2 LINE L2 2560 2632 -682 2305 75 14 3 chr5 146110856 146111150 -56974382 + AluY SINE Alu 1 297 -14 613 223 17 39 chr5 146111505 146111739 -56973793 - MER106B DNA MER1_type 0 236 1 289 284 73 0 chr5 146112109 146112218 -56973314 - MER94 DNA DNA -3 131 15 8618 134 55 11 chr5 146112997 146114520 -56971012 + Tigger1 DNA MER2_type 1 1589 -829 838 168 15 0 chr5 146114520 146114651 -56970881 + FLAM_C SINE Alu 1 133 -10 4755 114 22 56 chr5 146114651 146114822 -56970710 + Tigger1 DNA MER2_type 1585 1760 -658 1763 163 11 7 chr5 146114822 146115104 -56970428 + AluJo SINE Alu 29 311 -1 4755 114 22 56 chr5 146115104 146115795 -56969737 + Tigger1 DNA MER2_type 1760 2418 0 3295 248 53 51 chr5 146116257 146116988 -56968544 + L2 LINE L2 1982 2710 -603 719 200 16 0 chr5 146116988 146117113 -56968419 + FLAM_A SINE Alu 1 127 -6 2293 102 0 0 chr5 146117117 146117420 -56968112 + AluY SINE Alu 1 303 -8 3295 248 53 51 chr5 146117420 146117990 -56967542 + L2 LINE L2 2712 3292 -21 2126 95 14 20 chr5 146118376 146118671 -56966861 + AluSg SINE Alu 1 293 -17 2124 112 7 3 chr5 146118771 146119067 -56966465 + AluSx SINE Alu 1 297 -15 208 320 39 39 chr5 146121474 146121552 -56963980 + L2 LINE L2 3147 3224 -48 429 309 40 36 chr5 146122005 146122228 -56963304 + MIR SINE MIR 1 224 -38 284 258 32 48 chr5 146122223 146122347 -56963185 + MIR SINE MIR 116 237 -25 * 2292 90 0 22 chr5 146122487 146122798 -56962734 - AluSq SINE Alu -9 304 1 281 271 60 13 chr5 146122898 146123049 -56962483 + L1ME3A LINE L1 5494 5651 -519 1655 151 66 13 chr5 146123054 146123371 -56962161 - MER1B DNA MER1_type 0 339 6 452 212 127 134 chr5 146123395 146123814 -56961718 + L1ME3A LINE L1 5678 6093 -77 388 269 40 128 chr5 146124127 146124354 -56961178 + L2 LINE L2 3101 3307 -6 499 165 0 31 chr5 146124730 146124827 -56960705 + MER5B DNA MER1_type 84 177 -1 2051 116 0 20 chr5 146126222 146126524 -56959008 - AluSq SINE Alu -17 296 1 396 259 21 49 chr5 146126755 146126898 -56958634 - MIR SINE MIR 0 262 124 2283 92 16 7 chr5 146127912 146128215 -56957317 + AluSq SINE Alu 1 306 -7 1637 170 44 10 chr5 146130362 146130656 -56954876 + AluJo SINE Alu 1 304 -8 350 274 191 17 chr5 146130761 146131112 -56954420 + L1ME4a LINE L1 5352 5763 -2045 21 36 0 0 chr5 146131217 146131245 -56954287 + AT_rich Low_complexity Low_complexity 1 28 0 186 304 155 28 chr5 146131574 146131755 -56953777 + MIR SINE MIR 53 256 -6 589 93 50 86 chr5 146132747 146132794 -56952738 - L1MB3 LINE L1 0 6183 6136 2082 125 10 10 chr5 146132794 146133099 -56952433 - AluSx SINE Alu -7 305 1 589 93 50 86 chr5 146133099 146133190 -56952342 - L1MB3 LINE L1 -47 6136 6050 31 44 0 0 chr5 146133198 146133243 -56952289 + AT_rich Low_complexity Low_complexity 1 45 0 1230 164 135 66 chr5 146133374 146133648 -56951884 + AluJo SINE Alu 3 295 -17 5157 185 35 22 chr5 146133953 146136104 -56949428 - L1MB4 LINE L1 -13 6167 3989 1348 194 41 75 chr5 146136363 146136432 -56949100 - MLT1A2 LTR MaLR 0 374 304 1650 197 0 13 chr5 146136432 146136732 -56948800 + AluJb SINE Alu 1 296 -16 1348 194 41 75 chr5 146136732 146137049 -56948483 - MLT1A2 LTR MaLR -70 304 1 278 149 43 0 chr5 146137592 146137639 -56947893 - L2 LINE L2 0 3313 3265 1937 98 49 4 chr5 146137678 146137965 -56947567 - AluSc SINE Alu 0 299 1 195 42 0 0 chr5 146137984 146138008 -56947524 + (CAGGA)n Simple_repeat Simple_repeat 5 28 0 1545 204 3 16 chr5 146138014 146138318 -56947214 + AluJo SINE Alu 13 312 0 306 271 108 69 chr5 146138477 146138580 -56946952 + L1ME4a LINE L1 5783 5881 -240 2298 101 0 3 chr5 146138580 146138877 -56946655 + AluSq SINE Alu 1 296 -17 306 271 108 69 chr5 146138877 146139061 -56946471 + L1ME4a LINE L1 5881 6081 -40 2239 94 7 13 chr5 146139065 146139364 -56946168 - AluSg SINE Alu -13 297 1 996 127 69 11 chr5 146140363 146140552 -56944980 + Tigger2 DNA MER2_type 1 200 -2518 653 194 8 15 chr5 146140556 146140690 -56944842 + FLAM_A SINE Alu 7 139 -3 1735 164 43 3 chr5 146140696 146141025 -56944507 + Tigger2 DNA MER2_type 201 542 -2176 1522 98 0 47 chr5 146141027 146141276 -56944256 + AluY SINE Alu 77 315 0 843 146 0 0 chr5 146141287 146141410 -56944122 + FRAM SINE Alu 38 160 -16 9366 143 29 31 chr5 146141424 146142344 -56943188 + Tigger2 DNA MER2_type 530 1450 -1268 1862 125 78 0 chr5 146142344 146142625 -56942907 - AluSg SINE Alu -7 303 1 9366 143 29 31 chr5 146142625 146143117 -56942415 + Tigger2 DNA MER2_type 1450 1941 -777 2064 87 0 4 chr5 146143117 146143383 -56942149 + AluY SINE Alu 36 300 -11 9366 143 29 31 chr5 146143383 146143612 -56941920 + Tigger2 DNA MER2_type 1941 2169 -549 662 133 133 28 chr5 146143612 146143755 -56941777 + LTR8A LTR ERV1 1 158 -569 261 0 0 0 chr5 146144231 146144260 -56941272 + (A)n Simple_repeat Simple_repeat 1 29 0 2378 193 82 11 chr5 146145529 146146068 -56939464 + LTR8A LTR ERV1 151 727 0 3390 182 106 47 chr5 146146068 146146544 -56938988 + HUERS-P1 LTR ERV1 1 447 -5816 300 27 0 0 chr5 146146544 146146581 -56938951 + (TG)n Simple_repeat Simple_repeat 2 38 0 3390 182 106 47 chr5 146146581 146147244 -56938288 + HUERS-P1 LTR ERV1 447 1347 -4916 1124 166 18 9 chr5 146147250 146147534 -56937998 + HUERS-P1 LTR ERV1 355 1482 -4464 * 11628 102 39 33 chr5 146147531 146148057 -56937475 + MER83B-int LTR ERV1 768 1289 -3591 2221 113 0 10 chr5 146148057 146148366 -56937166 - AluSx SINE Alu -6 306 1 11628 102 39 33 chr5 146148366 146149713 -56935819 + MER83B-int LTR ERV1 1289 3329 -1551 1697 154 4 4 chr5 146149713 146149979 -56935553 + AluJo SINE Alu 38 303 -9 374 262 78 53 chr5 146149983 146150189 -56935343 + L1ME4a LINE L1 5754 5964 -157 385 288 5 27 chr5 146150210 146150394 -56935138 + (TA)n Simple_repeat Simple_repeat 1 180 0 192 344 43 21 chr5 146150478 146150571 -56934961 - MIR SINE MIR -111 151 57 23 0 0 0 chr5 146150889 146150912 -56934620 + AT_rich Low_complexity Low_complexity 1 23 0 2173 109 7 3 chr5 146150918 146151212 -56934320 - AluSg SINE Alu -15 295 1 2141 91 49 0 chr5 146151223 146151510 -56934022 - AluY SINE Alu -10 301 1 408 272 239 9 chr5 146151854 146152067 -56933465 + MIR SINE MIR 1 262 0 262 310 97 35 chr5 146152493 146152638 -56932894 + L2 LINE L2 3148 3301 -12 300 27 0 0 chr5 146152890 146152927 -56932605 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2038 114 4 0 chr5 146152937 146153210 -56932322 - AluSx SINE Alu -38 274 1 1390 194 129 32 chr5 146153290 146153724 -56931808 + L1M4 LINE L1 2501 2976 -3170 2158 132 3 0 chr5 146153726 146154036 -56931496 + AluSx SINE Alu 1 311 -1 730 254 66 0 chr5 146154036 146154217 -56931315 - MER58A DNA MER1_type -31 193 1 2939 231 38 93 chr5 146154295 146155496 -56930036 + L1M4 LINE L1 3254 4387 -1759 1948 147 0 26 chr5 146158366 146158678 -56926854 - AluJb SINE Alu -8 304 1 2094 141 0 0 chr5 146159076 146159388 -56926144 + AluSq SINE Alu 1 312 -1 1975 144 0 10 chr5 146159755 146160060 -56925472 + AluJb SINE Alu 1 302 -10 225 350 113 38 chr5 146160615 146160775 -56924757 + L2 LINE L2 3096 3267 -5 1043 169 42 164 chr5 146160833 146161189 -56924343 + L1ME1 LINE L1 5783 6181 15 2048 125 3 14 chr5 146161189 146161348 -56924184 - AluSx SINE Alu -19 293 137 2182 84 31 3 chr5 146161348 146161635 -56923897 - AluY SINE Alu -16 295 1 2048 125 3 14 chr5 146161635 146161771 -56923761 - AluSx SINE Alu -175 137 1 1043 169 42 164 chr5 146161771 146161798 -56923734 + L1ME1 LINE L1 6181 6111 -55 1690 178 0 7 chr5 146161798 146162074 -56923458 + AluJb SINE Alu 1 274 -38 1043 169 42 164 chr5 146162074 146162122 -56923410 + L1ME1 LINE L1 6110 6162 -4 373 259 37 37 chr5 146162353 146162461 -56923071 - MIR SINE MIR -34 228 121 2270 98 0 13 chr5 146163728 146164033 -56921499 - AluY SINE Alu -10 301 1 29 70 0 0 chr5 146164211 146164268 -56921264 + AT_rich Low_complexity Low_complexity 1 57 0 457 308 26 19 chr5 146164678 146164834 -56920698 + MIR3 SINE MIR 40 196 -12 664 206 188 0 chr5 146165338 146165498 -56920034 + MER3 DNA MER1_type 1 190 -19 771 145 8 38 chr5 146165962 146166093 -56919439 + FLAM_C SINE Alu 1 127 -16 492 157 0 150 chr5 146166504 146166657 -56918875 + MER106A DNA MER1_type 107 236 0 252 310 76 21 chr5 146166657 146166802 -56918730 + HAL1 LINE L1 747 899 -1608 372 259 118 29 chr5 146167004 146167174 -56918358 + HAL1 LINE L1 1141 1325 -1182 292 261 115 39 chr5 146167224 146167458 -56918074 + HAL1 LINE L1 2255 2506 -1 21 0 0 0 chr5 146167463 146167484 -56918048 + AT_rich Low_complexity Low_complexity 1 21 0 2137 130 7 0 chr5 146167762 146168055 -56917477 + AluSx SINE Alu 1 295 -17 1161 205 84 48 chr5 146168485 146168626 -56916906 + MER2 DNA MER2_type 1 135 -209 2186 59 0 18 chr5 146168626 146168898 -56916634 + AluY SINE Alu 35 301 -10 1161 205 84 48 chr5 146168898 146169088 -56916444 + MER2 DNA MER2_type 135 344 0 2828 231 33 6 chr5 146169091 146169726 -56915806 + MER82 DNA MER2_type 2 653 0 26 30 0 0 chr5 146169764 146169797 -56915735 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 146169978 146170008 -56915524 + AT_rich Low_complexity Low_complexity 1 30 0 311 184 39 18 chr5 146170441 146170660 -56914872 + AluJb SINE Alu 6 296 -6 2021 118 10 26 chr5 146170774 146171080 -56914452 - AluSx SINE Alu -11 301 1 891 174 0 36 chr5 146171672 146171839 -56913693 - FRAM SINE Alu -15 161 1 1080 101 141 15 chr5 146171881 146172079 -56913453 - L1MA2 LINE L1 0 6304 6082 537 188 54 9 chr5 146172080 146172192 -56913340 - FLAM_C SINE Alu -26 117 1 1994 163 0 0 chr5 146172432 146172733 -56912799 - AluJb SINE Alu -11 301 1 3961 214 123 87 chr5 146172821 146175268 -56910264 + L1MC2 LINE L1 21 2380 -4046 2277 70 0 11 chr5 146175268 146175592 -56909940 + AluY SINE Alu 1 321 0 3961 214 123 87 chr5 146175592 146175652 -56909880 + L1MC2 LINE L1 2380 2436 -3990 2144 121 13 57 chr5 146175652 146176041 -56909491 + THE1C LTR MaLR 2 373 -2 3961 214 123 87 chr5 146176041 146177146 -56908386 + L1MC2 LINE L1 2436 3767 -2659 4689 204 42 52 chr5 146177158 146178013 -56907519 + L1MC2 LINE L1 4235 5097 -1527 1393 140 70 3 chr5 146178013 146178060 -56907472 + L1MA8 LINE L1 5987 6029 -262 1864 159 7 10 chr5 146178060 146178362 -56907170 + AluSx SINE Alu 6 306 -6 1393 140 70 3 chr5 146178362 146178600 -56906932 + L1MA8 LINE L1 6029 6291 0 4689 204 42 52 chr5 146178600 146178619 -56906913 + L1MC2 LINE L1 5097 5115 -1509 612 40 0 0 chr5 146178619 146178694 -56906838 + (TA)n Simple_repeat Simple_repeat 2 76 0 4689 204 42 52 chr5 146178694 146178706 -56906826 + L1MC2 LINE L1 5115 5126 -1498 249 33 0 0 chr5 146178706 146178736 -56906796 + (CAGAA)n Simple_repeat Simple_repeat 4 33 0 4689 204 42 52 chr5 146178736 146180150 -56905382 + L1MC2 LINE L1 5126 6508 -116 1861 157 4 4 chr5 146180150 146180478 -56905054 + AluSx SINE Alu 2 329 0 4689 204 42 52 chr5 146180478 146180585 -56904947 + L1MC2 LINE L1 6508 6615 -9 565 197 14 14 chr5 146181796 146181938 -56903594 + L1MB2 LINE L1 6027 6168 -3 24 32 0 0 chr5 146181984 146182015 -56903517 + AT_rich Low_complexity Low_complexity 1 31 0 35 41 0 0 chr5 146182320 146182369 -56903163 + AT_rich Low_complexity Low_complexity 1 49 0 803 141 25 0 chr5 146182626 146182747 -56902785 - FLAM_C SINE Alu -19 124 1 550 243 48 10 chr5 146182779 146182985 -56902547 - MER113 DNA MER1_type? -307 214 1 2362 98 0 9 chr5 146183006 146183321 -56902211 + AluSx SINE Alu 1 312 0 662 280 21 42 chr5 146183342 146183581 -56901951 - MIR SINE MIR -28 234 1 2305 95 3 0 chr5 146184718 146185014 -56900518 - AluSg SINE Alu -13 297 1 1378 153 9 14 chr5 146185040 146185263 -56900269 + AluSg/x SINE Alu 83 304 -6 2329 92 3 0 chr5 146185315 146185607 -56899925 - AluSc SINE Alu -16 293 1 21 36 0 0 chr5 146185770 146185798 -56899734 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 146186057 146186078 -56899454 + AT_rich Low_complexity Low_complexity 1 21 0 1524 150 105 10 chr5 146186316 146186622 -56898910 + MER1B DNA MER1_type 3 337 0 1007 203 28 14 chr5 146187508 146187720 -56897812 - AluJo SINE Alu -12 300 86 2021 260 229 25 chr5 146188076 146189200 -56896332 + L2 LINE L2 1959 3313 0 26 64 0 0 chr5 146189593 146189640 -56895892 + AT_rich Low_complexity Low_complexity 1 47 0 4678 165 20 22 chr5 146190126 146190514 -56895018 + L1MB3 LINE L1 5009 5396 -787 1586 154 15 26 chr5 146190514 146190781 -56894751 + AluJb SINE Alu 1 264 -48 4678 165 20 22 chr5 146190781 146191603 -56893929 + L1MB3 LINE L1 5396 6183 0 23 54 0 0 chr5 146193199 146193236 -56892296 + AT_rich Low_complexity Low_complexity 1 37 0 262 297 28 126 chr5 146193397 146193579 -56891953 + MER5B DNA MER1_type 2 165 -13 281 339 24 73 chr5 146193747 146193912 -56891620 + L2 LINE L2 2922 3078 -194 22 35 0 0 chr5 146195142 146195171 -56890361 + AT_rich Low_complexity Low_complexity 1 29 0 1545 222 3 10 chr5 146196819 146197121 -56888411 - AluJo SINE Alu -12 300 1 1615 169 177 17 chr5 146197702 146198144 -56887388 + Charlie1 DNA MER1_type 1 2761 0 396 307 135 88 chr5 146198200 146198390 -56887142 + L2 LINE L2 1868 2048 -1266 2101 53 50 14 chr5 146198390 146198671 -56886861 - AluY SINE Alu -20 291 1 396 307 135 88 chr5 146198671 146199287 -56886245 + L2 LINE L2 2048 2712 -602 1052 316 50 12 chr5 146199320 146199737 -56885795 + LTR16B LTR ERVL 1 433 -31 737 311 91 56 chr5 146199771 146200280 -56885252 + L2 LINE L2 2735 3256 -16 195 42 0 0 chr5 146200280 146200304 -56885228 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 737 311 91 56 chr5 146200304 146200317 -56885215 + L2 LINE L2 3256 3267 -5 2173 122 0 0 chr5 146200530 146200833 -56884699 + AluSx SINE Alu 5 307 -5 22 0 0 0 chr5 146201084 146201106 -56884426 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr5 146201147 146201189 -56884343 + AT_rich Low_complexity Low_complexity 1 42 0 941 198 12 103 chr5 146202120 146202313 -56883219 + MER58A DNA MER1_type 1 169 -2251 3518 42 2 0 chr5 146202313 146202743 -56882789 - L1PA4 LINE L1 -3 6152 5722 941 198 12 103 chr5 146202743 146202792 -56882740 + MER58A DNA MER1_type 169 221 -3 2111 95 10 30 chr5 146203222 146203526 -56882006 + AluSx SINE Alu 1 298 -14 590 300 23 19 chr5 146204858 146205133 -56880399 - L1MC4a LINE L1 -252 5910 5628 4289 180 49 30 chr5 146205238 146206816 -56878716 + L1MB1 LINE L1 4573 6163 -5 2045 104 0 4 chr5 146206844 146207114 -56878418 + AluSg SINE Alu 7 275 -35 2107 111 0 7 chr5 146208017 146208305 -56877227 - AluSc SINE Alu -23 286 1 30283 105 18 30 chr5 146209038 146214898 -56870634 - L1PA7 LINE L1 -8 6461 1 1020 166 0 0 chr5 146214909 146215066 -56870466 - AluJo/FRAM SINE Alu -22 290 134 2252 98 17 0 chr5 146215066 146215362 -56870170 - AluSp SINE Alu -12 301 1 221 219 281 35 chr5 146216086 146216200 -56869332 + L2 LINE L2 3172 3313 0 738 153 36 124 chr5 146216654 146216694 -56868838 - Charlie1 DNA MER1_type 0 2761 2719 1846 148 45 0 chr5 146216694 146216984 -56868548 + AluSx SINE Alu 1 303 -9 738 153 36 124 chr5 146216984 146217192 -56868340 - Charlie1 DNA MER1_type -42 2719 2535 16411 39 3 1 chr5 146217709 146219730 -56865802 - L1PA5 LINE L1 -1051 5095 3070 7292 36 3 1 chr5 146219730 146220777 -56864755 + L1PA5 LINE L1 5090 6138 -16 306 250 22 54 chr5 146220799 146220891 -56864641 + L1MC4 LINE L1 6615 6703 -1339 * 315 284 23 0 chr5 146220843 146220931 -56864601 - L1MC4 LINE L1 -1339 6703 6614 * 340 333 8 0 chr5 146220901 146221021 -56864511 + L1MC4 LINE L1 6614 6734 -1308 256 282 39 0 chr5 146221035 146221113 -56864419 + MIR SINE MIR 81 161 -101 207 0 0 0 chr5 146221129 146221152 -56864380 + (TG)n Simple_repeat Simple_repeat 2 24 0 1087 125 18 48 chr5 146221220 146221388 -56864144 - AluJo SINE Alu -141 171 9 401 221 184 25 chr5 146221538 146221701 -56863831 - MIR SINE MIR -2 260 72 1169 161 0 0 chr5 146221814 146221988 -56863544 + MER1B DNA MER1_type 20 193 -104 878 252 84 8 chr5 146221991 146222253 -56863279 + L1MC4 LINE L1 7621 7902 -140 187 250 68 34 chr5 146222741 146222829 -56862703 + L2 LINE L2 2915 3005 -308 191 297 16 16 chr5 146222913 146222977 -56862555 + MIR SINE MIR 94 157 -105 343 300 30 20 chr5 146223107 146223207 -56862325 + L2 LINE L2 3117 3217 -55 818 119 0 45 chr5 146223208 146223342 -56862190 - MER1B DNA MER1_type 0 339 212 504 214 0 0 chr5 146223380 146223483 -56862049 - FLAM_A SINE Alu -3 139 37 300 327 9 85 chr5 146223765 146223831 -56861701 - L1M4 LINE L1 -1001 5145 5076 1888 106 3 66 chr5 146223831 146224134 -56861398 - AluSx SINE Alu -28 284 1 1739 168 3 26 chr5 146224134 146224437 -56861095 - AluJo SINE Alu -16 296 1 300 327 9 85 chr5 146224437 146224580 -56860952 - L1M4 LINE L1 -1068 5078 4951 375 206 3 10 chr5 146224581 146224661 -56860871 + FLAM_A SINE Alu 62 120 -13 364 220 107 70 chr5 146224685 146224853 -56860679 - L1M4 LINE L1 -1181 4965 4805 2431 78 0 0 chr5 146224853 146225159 -56860373 + AluY SINE Alu 1 306 -5 364 220 107 70 chr5 146225159 146225288 -56860244 - L1M4 LINE L1 -1341 4805 4638 347 328 69 39 chr5 146225336 146225641 -56859891 - L1M4 LINE L1 -1552 4594 4281 3871 91 13 4 chr5 146225991 146226540 -56858992 + MER41A LTR ERV1 1 554 0 355 185 0 0 chr5 146227260 146227325 -56858207 + FLAM SINE Alu 44 108 -25 1836 170 3 0 chr5 146227503 146227809 -56857723 + AluSx SINE Alu 1 307 -5 1240 181 144 25 chr5 146228881 146229207 -56856325 + MLT1A1 LTR MaLR 1 365 0 181 309 88 0 chr5 146229577 146229645 -56855887 + L3 LINE CR1 623 696 -881 26 64 0 0 chr5 146230108 146230155 -56855377 + AT_rich Low_complexity Low_complexity 1 47 0 238 272 10 58 chr5 146230517 146230560 -56854972 + L1ME3A LINE L1 5520 5564 -602 1932 169 3 7 chr5 146230560 146230868 -56854664 + AluJb SINE Alu 3 309 -3 238 272 10 58 chr5 146230868 146230927 -56854605 + L1ME3A LINE L1 5564 5617 -549 301 304 48 16 chr5 146231029 146231154 -56854378 + L1ME3A LINE L1 5817 5945 -225 5570 119 30 0 chr5 146231590 146232547 -56852985 - L1PA16 LINE L1 -1 6165 5201 6807 139 40 19 chr5 146233480 146233733 -56851799 + Tigger3b DNA MER2_type 2 248 -2780 2392 86 0 19 chr5 146233733 146234046 -56851486 + AluSc SINE Alu 1 307 -2 6807 139 40 19 chr5 146234046 146234706 -56850826 + Tigger3b DNA MER2_type 248 948 -2080 2218 111 3 0 chr5 146234706 146235013 -56850519 - AluSx SINE Alu -4 308 1 6807 139 40 19 chr5 146235013 146235303 -56850229 + Tigger3b DNA MER2_type 948 1231 0 190 273 36 0 chr5 146235725 146235780 -56849752 - L2 LINE L2 -2 3311 3255 1629 169 78 11 chr5 146235931 146236215 -56849317 - AluSx SINE Alu -9 303 1 526 328 67 82 chr5 146236476 146236805 -56848727 + L2 LINE L2 2896 3219 -53 930 213 149 26 chr5 146236950 146237336 -56848196 + L1MB7 LINE L1 5745 6178 0 2339 75 0 3 chr5 146237369 146237664 -56847868 - AluY SINE Alu -17 294 1 2385 236 126 21 chr5 146237682 146238107 -56847425 + L1ME2 LINE L1 4985 5364 -800 2114 118 0 28 chr5 146238107 146238429 -56847103 + AluSp SINE Alu 1 313 0 2385 236 126 21 chr5 146238429 146239065 -56846467 + L1ME2 LINE L1 5364 6163 -1 2276 109 0 0 chr5 146239139 146239433 -56846099 - AluSc SINE Alu -15 294 1 357 204 51 61 chr5 146239731 146239829 -56845703 - MIR SINE MIR -156 106 10 430 325 99 59 chr5 146240184 146240460 -56845072 - L2 LINE L2 -725 2589 2326 2163 144 0 0 chr5 146240460 146240772 -56844760 + AluSx SINE Alu 1 312 0 430 325 99 59 chr5 146240772 146241048 -56844484 - L2 LINE L2 -988 2326 1997 2115 108 14 20 chr5 146241048 146241345 -56844187 + AluSx SINE Alu 1 295 -17 430 325 99 59 chr5 146241345 146241539 -56843993 - L2 LINE L2 -1317 1997 1812 902 137 15 144 chr5 146244144 146244341 -56841191 + MER106A DNA MER1_type 1 155 -81 5733 110 27 2 chr5 146244341 146245576 -56839956 + L1PA16 LINE L1 4897 6166 0 902 137 15 144 chr5 146245576 146245649 -56839883 + MER106A DNA MER1_type 155 236 0 480 139 0 0 chr5 146246178 146246257 -56839275 + (GGGA)n Simple_repeat Simple_repeat 2 80 0 6008 150 23 5 chr5 146246580 146248094 -56837438 + L1MA3 LINE L1 4125 5669 -636 3230 90 59 0 chr5 146248095 146248604 -56836928 + L1MA3 LINE L1 5732 6270 -35 342 0 0 0 chr5 146248610 146248648 -56836884 + (CA)n Simple_repeat Simple_repeat 2 39 0 1451 181 210 8 chr5 146248689 146249042 -56836490 - MSTB LTR MaLR -2 424 1 2801 133 17 2 chr5 146249205 146249627 -56835905 + MSTA LTR MaLR 1 428 0 1655 189 14 3 chr5 146249629 146249926 -56835606 - AluJb SINE Alu -12 300 1 1839 175 3 3 chr5 146250262 146250559 -56834973 + AluJo SINE Alu 1 297 -15 699 127 175 0 chr5 146251424 146251550 -56833982 - AluJo SINE Alu -7 305 158 * 748 161 0 0 chr5 146251545 146251663 -56833869 - AluJo SINE Alu -194 118 1 2613 179 27 39 chr5 146251838 146252398 -56833134 - MLT2B3 LTR ERVL 0 554 2 2542 72 10 0 chr5 146252473 146252778 -56832754 + AluSc SINE Alu 1 308 -1 1947 109 44 0 chr5 146253850 146254125 -56831407 + AluSx SINE Alu 1 287 -25 198 0 0 0 chr5 146254130 146254152 -56831380 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 407 305 125 25 chr5 146255914 146256114 -56829418 + MIR SINE MIR 23 242 -20 1548 31 37 0 chr5 146256261 146256452 -56829080 - L1PA3 LINE L1 -2 6153 5956 1467 174 51 27 chr5 146257361 146257734 -56827798 + L1ME1 LINE L1 5785 6166 0 309 300 114 71 chr5 146257817 146258237 -56827295 + L2 LINE L2 2287 2724 -590 1451 210 52 53 chr5 146258693 146259198 -56826334 + Charlie4a DNA MER1_type 1 504 -4 1719 189 3 3 chr5 146259363 146259649 -56825883 - AluJo SINE Alu -26 286 1 197 83 28 0 chr5 146260813 146260849 -56824683 + (TA)n Simple_repeat Simple_repeat 2 38 0 2269 94 3 0 chr5 146260850 146261149 -56824383 - AluSq SINE Alu -13 300 1 375 205 36 0 chr5 146261152 146261235 -56824297 + MIR SINE MIR 167 252 -10 1072 201 69 146 chr5 146261726 146261968 -56823564 + L1ME3A LINE L1 5666 5883 -287 228 114 0 0 chr5 146261968 146262003 -56823529 + U6 snRNA snRNA 3 37 -70 1072 201 69 146 chr5 146262003 146262262 -56823270 + L1ME3A LINE L1 5883 6160 -10 809 173 6 49 chr5 146262272 146262434 -56823098 + AluJo SINE Alu 1 155 -157 26 30 0 0 chr5 146262528 146262561 -56822971 + AT_rich Low_complexity Low_complexity 1 33 0 349 270 121 49 chr5 146262603 146262991 -56822541 + L1MC5 LINE L1 6640 7032 -929 241 202 10 106 chr5 146263045 146263081 -56822451 + L1MC4 LINE L1 7163 7201 -841 699 197 230 0 chr5 146263081 146263233 -56822299 + MER5A DNA MER1_type 3 189 0 241 202 10 106 chr5 146263233 146263300 -56822232 + L1MC4 LINE L1 7201 7256 -786 741 152 8 0 chr5 146263410 146263535 -56821997 + FLAM_C SINE Alu 13 138 -5 416 216 90 105 chr5 146263543 146263678 -56821854 + L1MC5 LINE L1 7272 7408 -553 7082 11 0 0 chr5 146263678 146264481 -56821051 + L1PA2 LINE L1 5353 6155 0 416 216 90 105 chr5 146264481 146264719 -56820813 + L1MC5 LINE L1 7408 7648 -313 2299 97 0 34 chr5 146264719 146265039 -56820493 + AluSc SINE Alu 1 309 0 416 216 90 105 chr5 146265039 146265233 -56820299 + L1MC5 LINE L1 7648 7925 -36 790 116 8 16 chr5 146265244 146265365 -56820167 + AluJb SINE Alu 5 124 -188 180 0 0 0 chr5 146265365 146265385 -56820147 + (TAA)n Simple_repeat Simple_repeat 2 21 0 405 284 75 78 chr5 146265438 146265720 -56819812 + HAL1 LINE L1 57 337 -2170 9409 99 52 83 chr5 146265730 146267197 -56818335 + Tigger1 DNA MER2_type 2 1513 -905 1555 203 23 10 chr5 146267197 146267503 -56818029 + AluJo SINE Alu 1 310 -2 9409 99 52 83 chr5 146267503 146267588 -56817944 + Tigger1 DNA MER2_type 1513 1599 -819 1582 163 25 74 chr5 146267588 146267913 -56817619 + AluJb SINE Alu 1 309 -3 9409 99 52 83 chr5 146267913 146268161 -56817371 + Tigger1 DNA MER2_type 1599 1747 -671 844 83 0 0 chr5 146268175 146268284 -56817248 - AluSq/x SINE Alu -203 109 1 870 189 53 21 chr5 146268292 146268482 -56817050 + Tigger1 DNA MER2_type 2222 2417 -1 1283 249 101 70 chr5 146268635 146269779 -56815753 + HAL1 LINE L1 1049 2228 -279 1955 156 7 10 chr5 146269860 146270168 -56815364 + AluJo SINE Alu 1 307 -5 636 86 0 60 chr5 146270296 146270531 -56815001 + (TA)n Simple_repeat Simple_repeat 1 220 0 2318 92 16 0 chr5 146270594 146270897 -56814635 + AluSq SINE Alu 1 308 -5 39 18 0 18 chr5 146271023 146271045 -56814487 + AT_rich Low_complexity Low_complexity 1 22 -34 724 198 0 0 chr5 146271045 146271161 -56814371 + FLAM_A SINE Alu 1 116 -17 39 18 0 18 chr5 146271161 146271195 -56814337 + AT_rich Low_complexity Low_complexity 22 56 0 22 35 0 0 chr5 146271360 146271389 -56814143 + AT_rich Low_complexity Low_complexity 1 29 0 420 277 143 0 chr5 146271532 146271644 -56813888 - L2 LINE L2 0 3313 3186 1741 182 114 8 chr5 146271887 146272245 -56813287 + MSTD LTR MaLR 1 396 0 182 139 0 28 chr5 146272288 146272324 -56813208 - MIR SINE MIR -72 190 156 203 303 30 15 chr5 146272657 146272723 -56812809 - MIR SINE MIR -166 96 30 932 271 29 0 chr5 146272847 146273057 -56812475 + MIR SINE MIR 15 230 -32 598 242 13 40 chr5 146273151 146273300 -56812232 + FRAM SINE Alu 1 145 -31 2094 87 18 96 chr5 146273708 146274041 -56811491 + AluSx SINE Alu 1 307 -5 2502 111 15 0 chr5 146274197 146274586 -56810946 + L1MA5 LINE L1 5603 5997 -303 32 43 0 0 chr5 146274596 146274642 -56810890 + AT_rich Low_complexity Low_complexity 1 46 0 985 271 90 49 chr5 146274854 146275385 -56810147 + L2 LINE L2 1823 2375 -939 280 230 95 0 chr5 146275406 146275480 -56810052 - L2 LINE L2 0 3272 3192 22 0 0 0 chr5 146275491 146275513 -56810019 + AT_rich Low_complexity Low_complexity 1 22 0 1335 153 5 5 chr5 146275601 146275824 -56809708 + AluJb SINE Alu 84 306 -6 253 309 0 29 chr5 146276041 146276109 -56809423 - L2 LINE L2 -199 3073 3008 502 194 159 83 chr5 146276244 146276643 -56808889 + L1MC5 LINE L1 6816 7233 -728 363 299 60 0 chr5 146276738 146276855 -56808677 + L1MC5 LINE L1 7260 7383 -578 292 127 73 18 chr5 146276869 146276924 -56808608 - MER5A DNA MER1_type -10 179 122 353 277 64 20 chr5 146276992 146277194 -56808338 + L1MC5 LINE L1 7499 7709 -252 243 304 25 0 chr5 146277347 146277426 -56808106 - MIR SINE MIR -29 233 153 2529 63 0 0 chr5 146277482 146277782 -56807750 - AluSq SINE Alu -13 300 1 232 328 0 0 chr5 146277809 146277867 -56807665 - L2 LINE L2 -635 2679 2622 1381 174 47 7 chr5 146277944 146278243 -56807289 + MER46B DNA MER2_type 51 236 0 1823 138 7 30 chr5 146278358 146278656 -56806876 - AluJb SINE Alu -21 291 1 347 110 209 0 chr5 146279257 146279348 -56806184 + L1M3 LINE L1 5380 5489 -679 434 113 14 28 chr5 146279369 146279440 -56806092 + AluJ/FLAM SINE Alu 1 70 -242 812 176 7 0 chr5 146279440 146279576 -56805956 + AluJo/FRAM SINE Alu 170 306 -6 30 45 0 0 chr5 146279577 146279621 -56805911 + AT_rich Low_complexity Low_complexity 1 44 0 1361 224 21 12 chr5 146279622 146279961 -56805571 + L1ME1 LINE L1 5473 5814 -352 575 229 29 14 chr5 146279968 146280108 -56805424 + AluJb SINE Alu 132 273 -39 585 189 183 16 chr5 146280146 146280337 -56805195 + L1ME1 LINE L1 5940 6162 -4 26 0 0 0 chr5 146281119 146281145 -56804387 + AT_rich Low_complexity Low_complexity 1 26 0 334 294 128 66 chr5 146282001 146282321 -56803211 + L1M2 LINE L1 899 1238 -5611 21 0 0 0 chr5 146282367 146282388 -56803144 + GC_rich Low_complexity Low_complexity 1 21 0 1210 160 56 101 chr5 146283520 146283675 -56801857 + AluJb SINE Alu 1 137 -165 2038 93 38 10 chr5 146283675 146283965 -56801567 + AluSq SINE Alu 1 298 -15 1210 160 56 101 chr5 146283965 146284115 -56801417 + AluJb SINE Alu 137 292 -10 199 217 464 0 chr5 146284516 146284682 -56800850 - L2 LINE L2 -51 3262 3020 1927 288 193 15 chr5 146286103 146287038 -56798494 - L2 LINE L2 -4 3309 2541 2339 80 0 35 chr5 146287038 146287352 -56798180 - AluY SINE Alu -8 303 1 1927 288 193 15 chr5 146287352 146287832 -56797700 - L2 LINE L2 -772 2541 1633 300 267 173 0 chr5 146287831 146287906 -56797626 - L2 LINE L2 -25 3247 3160 * 305 336 34 47 chr5 146288038 146288170 -56797362 - L2 LINE L2 -9 3263 3132 1868 138 0 52 chr5 146288170 146288495 -56797037 + AluSx SINE Alu 1 308 -4 305 336 34 47 chr5 146288495 146288511 -56797021 - L2 LINE L2 -140 3132 3117 756 262 79 37 chr5 146288588 146289042 -56796490 - MLT1K LTR MaLR -3 473 1 723 337 68 35 chr5 146289141 146289744 -56795788 - L2 LINE L2 -1066 2248 1626 2093 133 3 7 chr5 146289909 146290211 -56795321 - AluJo SINE Alu -11 301 1 2436 76 0 0 chr5 146290580 146290883 -56794649 - AluY SINE Alu -8 303 1 180 320 39 51 chr5 146291285 146291363 -56794169 + L2 LINE L2 3146 3222 -50 22 35 0 0 chr5 146292447 146292476 -56793056 + AT_rich Low_complexity Low_complexity 1 29 0 369 280 224 0 chr5 146293165 146293308 -56792224 + MER5B DNA MER1_type 1 175 -3 464 267 123 0 chr5 146293322 146293485 -56792047 + MER5A DNA MER1_type 4 189 0 188 245 176 20 chr5 146293492 146293594 -56791938 + L2 LINE L2 552 669 -2645 242 317 148 10 chr5 146293871 146293972 -56791560 - MER5A DNA MER1_type -73 116 2 1720 167 45 0 chr5 146294114 146294402 -56791130 + AluJb SINE Alu 1 301 -11 311 323 123 23 chr5 146294428 146294558 -56790974 + L2 LINE L2 3129 3271 -1 2177 92 30 16 chr5 146294847 146295152 -56790380 + AluSc SINE Alu 1 309 0 476 245 126 0 chr5 146295245 146295396 -56790136 - MIR SINE MIR -16 246 77 346 329 36 6 chr5 146295739 146295882 -56789650 + MIR3 SINE MIR 17 162 -46 211 301 151 21 chr5 146295882 146295975 -56789557 - MER5A DNA MER1_type -1 188 84 189 305 102 0 chr5 146295993 146296052 -56789480 + L3 LINE CR1 1495 1559 -18 1571 106 181 15 chr5 146296661 146296926 -56788606 - AluSg1 SINE Alu 0 309 1 1263 89 11 21 chr5 146296929 146297120 -56788412 - AluY SINE Alu -13 298 110 1290 240 40 48 chr5 146297223 146297721 -56787811 - L1ME3A LINE L1 -85 6085 5593 11579 177 39 31 chr5 146297721 146298677 -56786855 + ERVL-C1 LTR ERVL 2904 3851 -1913 2447 73 0 3 chr5 146298677 146298977 -56786555 - AluY SINE Alu -12 299 1 11579 177 39 31 chr5 146298977 146299046 -56786486 + ERVL-C1 LTR ERVL 3851 3918 -1846 3166 81 29 9 chr5 146299046 146299490 -56786042 - MLT2A2 LTR ERVL 0 453 1 11579 177 39 31 chr5 146299490 146299529 -56786003 + ERVL-C1 LTR ERVL 3918 3955 -1809 2000 136 7 7 chr5 146299529 146299823 -56785709 - AluJb SINE Alu -14 298 5 11579 177 39 31 chr5 146299823 146301196 -56784336 + ERVL-C1 LTR ERVL 3955 5363 -401 1386 188 65 3 chr5 146301193 146301486 -56784046 + ERVL-C1 LTR ERVL 5443 5753 -11 * 1381 167 41 70 chr5 146301489 146301831 -56783701 + MLT2C1 LTR ERVL 1 332 -65 308 241 96 0 chr5 146301835 146301918 -56783614 - L1MEd LINE L1 -4969 1150 1060 2651 190 13 36 chr5 146302117 146302580 -56782952 + MLT2B2 LTR ERVL 1 452 -63 2284 81 7 17 chr5 146302580 146302878 -56782654 + AluY SINE Alu 1 295 -16 2651 190 13 36 chr5 146302878 146302941 -56782591 + MLT2B2 LTR ERVL 452 515 0 518 302 108 14 chr5 146303249 146303461 -56782071 + MIR SINE MIR 20 251 -11 785 169 7 45 chr5 146303671 146303825 -56781707 - FRAM SINE Alu -18 158 11 532 276 102 25 chr5 146304221 146304417 -56781115 - MIR SINE MIR 0 262 52 431 189 0 0 chr5 146304570 146304644 -56780888 + AluJ/FLAM SINE Alu 1 74 -238 297 155 0 0 chr5 146304644 146304702 -56780830 + GA-rich Low_complexity Low_complexity 6 63 0 1056 192 0 0 chr5 146304933 146305100 -56780432 - AluSg/x SINE Alu -11 299 133 2888 0 0 0 chr5 146305100 146305409 -56780123 - AluYa5 SINE Alu -2 309 1 2183 99 0 48 chr5 146305409 146305721 -56779811 - AluSx SINE Alu -15 297 1 11160 158 41 14 chr5 146305721 146306965 -56778567 - L1 LINE L1 -2356 5209 4000 1559 174 71 17 chr5 146306965 146307259 -56778273 - AluJb SINE Alu -2 310 1 11160 158 41 14 chr5 146307259 146309483 -56776049 - L1 LINE L1 -3565 4000 1639 1616 177 3 28 chr5 146309567 146309886 -56775646 + AluJo SINE Alu 1 312 0 755 273 116 62 chr5 146309912 146310238 -56775294 + L1MEd LINE L1 895 1202 -4927 1519 200 0 47 chr5 146310238 146310538 -56774994 + AluJo SINE Alu 1 286 -26 755 273 116 62 chr5 146310538 146310635 -56774897 + L1MEd LINE L1 1202 1292 -4837 2242 155 164 46 chr5 146310635 146311176 -56774356 - MER77 LTR ERV1 0 605 1 755 273 116 62 chr5 146311176 146311426 -56774106 + L1MEd LINE L1 1292 1527 -4602 928 118 0 15 chr5 146311426 146311561 -56773971 - FLAM_C SINE Alu 0 133 1 755 273 116 62 chr5 146311561 146311886 -56773646 + L1MEd LINE L1 1527 1833 -4296 1854 161 35 27 chr5 146311886 146312258 -56773274 + THE1C LTR MaLR 1 375 0 755 273 116 62 chr5 146312258 146312329 -56773203 + L1MEd LINE L1 1833 1899 -4230 1650 190 31 10 chr5 146312329 146312619 -56772913 - AluJo SINE Alu -16 296 1 755 273 116 62 chr5 146312619 146313148 -56772384 + L1MEd LINE L1 1899 2561 -3568 1009 128 64 6 chr5 146313231 146313387 -56772145 + FRAM SINE Alu 1 160 -16 627 271 86 41 chr5 146313429 146313497 -56772035 + HAL1 LINE L1 1045 1109 -1398 1836 133 3 40 chr5 146313497 146313798 -56771734 - AluJb SINE Alu -22 290 1 627 271 86 41 chr5 146313798 146314068 -56771464 + HAL1 LINE L1 1109 1398 -1109 433 280 19 10 chr5 146314099 146314306 -56771226 + L1MEd LINE L1 2771 2979 -3150 1466 256 94 4 chr5 146314369 146314923 -56770609 + HAL1 LINE L1 1386 1989 -518 783 244 85 52 chr5 146314954 146315319 -56770213 + MLT1B LTR MaLR 1 377 -13 1029 175 0 48 chr5 146315442 146315631 -56769901 + AluJb SINE Alu 1 180 -132 299 337 0 11 chr5 146315974 146316069 -56769463 + MLT1K LTR MaLR 133 226 -362 2082 129 0 0 chr5 146316290 146316569 -56768963 - AluSx SINE Alu -18 294 16 1540 196 7 28 chr5 146316654 146316940 -56768592 + AluJo SINE Alu 1 280 -32 243 0 0 0 chr5 146316940 146316967 -56768565 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 2682 69 20 3 chr5 146317037 146317386 -56768146 - THE1A LTR MaLR 0 355 1 10678 95 14 7 chr5 146317386 146318909 -56766623 - THE1A-int LTR MaLR 0 1580 46 2098 77 3 10 chr5 146318910 146319208 -56766324 - THE1A LTR MaLR -59 296 1 4751 146 52 63 chr5 146319580 146320938 -56764594 - L1MA9 LINE L1 0 6312 4969 2159 85 17 7 chr5 146320982 146321275 -56764257 - AluY SINE Alu -14 297 2 335 148 159 11 chr5 146321284 146321372 -56764160 - L1PA13 LINE L1 -5 6158 6058 1498 78 0 0 chr5 146321472 146321651 -56763881 - AluY SINE Alu -132 179 1 17513 181 25 12 chr5 146321660 146327201 -56758331 - L1PA13 LINE L1 -4 6810 1194 3435 186 68 13 chr5 146327201 146327763 -56757769 - L1MA9 LINE L1 -1351 4795 4167 1800 104 127 0 chr5 146327763 146328023 -56757509 - AluSc SINE Alu -6 293 1 3435 186 68 13 chr5 146328023 146328325 -56757207 - L1MA9 LINE L1 -1979 4167 3883 463 234 47 39 chr5 146328335 146328591 -56756941 - L1M4c LINE L1 -4097 2287 2030 5249 192 28 6 chr5 146328607 146329648 -56755884 - MSTA-int LTR MaLR -587 1064 1 1894 157 146 8 chr5 146329648 146330024 -56755508 - MSTA LTR MaLR 0 428 1 1585 267 24 13 chr5 146330026 146330490 -56755042 + L1MEc LINE L1 238 706 -5857 8723 203 54 36 chr5 146330750 146330839 -56754693 + L1MEc LINE L1 636 722 -5660 2436 90 0 10 chr5 146330839 146331151 -56754381 + AluY SINE Alu 1 309 -2 8723 203 54 36 chr5 146331151 146332404 -56753128 + L1MEc LINE L1 722 1951 -4431 1415 220 59 0 chr5 146332404 146332677 -56752855 + AluJb SINE Alu 1 289 -23 8723 203 54 36 chr5 146332677 146334879 -56750653 + L1MEc LINE L1 1951 4243 -2139 1487 124 28 43 chr5 146334879 146335161 -56750371 + MSTA LTR MaLR 1 278 -150 523 70 0 0 chr5 146335428 146335499 -56750033 + MSTA LTR MaLR 358 428 0 678 170 88 18 chr5 146335499 146335670 -56749862 + L1MEc LINE L1 4239 4421 -1961 2480 194 20 2 chr5 146335777 146336335 -56749197 + L1MEc LINE L1 4723 5290 -1092 1103 198 9 39 chr5 146336340 146336572 -56748960 + AluJb SINE Alu 87 311 -1 532 271 5 5 chr5 146336572 146336764 -56748768 + L1MEc LINE L1 5289 5480 -902 788 175 19 45 chr5 146337395 146337549 -56747983 - MER2 DNA MER2_type -195 150 1 2031 198 53 22 chr5 146337549 146337706 -56747826 + L1MB7 LINE L1 5643 5794 -390 2231 120 41 19 chr5 146337706 146338073 -56747459 + THE1C LTR MaLR 1 375 0 2031 198 53 22 chr5 146338073 146338421 -56747111 + L1MB7 LINE L1 5794 6164 -20 4873 166 40 5 chr5 146339031 146340114 -56745418 + L1MB3 LINE L1 5062 6176 -7 315 250 9 23 chr5 146340996 146341209 -56744323 + GA-rich Low_complexity Low_complexity 1 210 0 187 259 7 7 chr5 146341224 146341359 -56744173 + GA-rich Low_complexity Low_complexity 2 136 0 196 240 155 54 chr5 146341775 146341904 -56743628 + MIR SINE MIR 120 261 -1 302 320 49 16 chr5 146342099 146342221 -56743311 + LTR16B LTR ERVL 188 313 -151 23 0 0 0 chr5 146342381 146342404 -56743128 + AT_rich Low_complexity Low_complexity 1 23 0 969 50 0 0 chr5 146342556 146342675 -56742857 - L1PA4 LINE L1 0 6155 6037 1605 268 35 48 chr5 146342962 146343828 -56741704 + L1PA13 LINE L1 403 1542 -5245 3851 128 20 3 chr5 146343831 146344854 -56740678 + L1P4 LINE L1 4786 5822 -343 13008 177 32 34 chr5 146344871 146344914 -56740618 - L1 LINE L1 -1135 5713 5671 2629 154 31 7 chr5 146344914 146345330 -56740202 + MSTA LTR MaLR 1 426 -2 13008 177 32 34 chr5 146345330 146346040 -56739492 - L1 LINE L1 -1177 5671 4961 2165 114 0 13 chr5 146346040 146346346 -56739186 - AluSg1 SINE Alu -7 302 1 2198 124 3 3 chr5 146346354 146346661 -56738871 - AluSx SINE Alu -5 307 1 13008 177 32 34 chr5 146346661 146346708 -56738824 - L1 LINE L1 -1894 4954 4908 2163 113 3 7 chr5 146346708 146347001 -56738531 + AluSc SINE Alu 1 292 -17 13008 177 32 34 chr5 146347001 146348302 -56737230 - L1 LINE L1 -1940 4908 3606 1645 186 0 17 chr5 146348302 146348598 -56736934 - AluJo SINE Alu -21 291 1 13008 177 32 34 chr5 146348598 146349272 -56736260 - L1 LINE L1 -3242 3606 2932 2335 118 48 22 chr5 146349272 146349627 -56735905 + THE1B LTR MaLR 1 364 0 13008 177 32 34 chr5 146349627 146350824 -56734708 - L1 LINE L1 -3916 2932 1737 2281 95 0 0 chr5 146350824 146351118 -56734414 - AluY SINE Alu -17 294 1 13008 177 32 34 chr5 146351118 146352288 -56733244 - L1 LINE L1 -5111 1737 566 446 345 98 0 chr5 146352519 146352783 -56732749 + L2 LINE L2 1635 1924 -1390 5980 167 14 26 chr5 146352803 146353700 -56731832 - L1MC1 LINE L1 -6 6607 5700 1637 197 21 3 chr5 146353700 146353984 -56731548 - AluJb SINE Alu -23 289 1 5980 167 14 26 chr5 146353984 146354171 -56731361 - L1MC1 LINE L1 -913 5700 5512 1253 194 148 8 chr5 146354171 146354434 -56731098 - AluJb SINE Alu -2 300 1 5980 167 14 26 chr5 146354434 146355102 -56730430 - L1MC1 LINE L1 -1101 5512 4910 2588 172 50 56 chr5 146355115 146355651 -56729881 - L1MC1 LINE L1 -5876 550 18 834 153 1 9 chr5 146355660 146355816 -56729716 + L1MA3 LINE L1 6145 6302 -3 492 307 137 26 chr5 146355865 146356479 -56729053 + L2 LINE L2 1937 2675 -639 184 212 0 0 chr5 146356573 146356606 -56728926 + MIR SINE MIR 112 144 -118 5884 60 18 0 chr5 146356614 146357378 -56728154 + L1P LINE L1 1 778 -5368 43018 37 2 0 chr5 146357478 146363376 -56722156 + L1PA4 LINE L1 246 6152 -3 1822 176 10 3 chr5 146363583 146363889 -56721643 + AluJb SINE Alu 1 308 -4 1369 206 23 19 chr5 146363996 146364258 -56721274 + Tigger7 DNA MER2_type 5 267 -2220 582 91 114 23 chr5 146364256 146364344 -56721188 + Tigger7 DNA MER2_type 2391 2486 -1 * 2378 79 0 0 chr5 146364505 146364796 -56720736 + AluY SINE Alu 1 291 -20 1738 167 3 26 chr5 146364807 146365112 -56720420 + AluJo SINE Alu 1 298 -14 297 340 53 25 chr5 146365577 146365623 -56719909 + L2 LINE L2 1597 1640 -1674 623 98 0 22 chr5 146365623 146365715 -56719817 - L1PB3 LINE L1 0 6154 6065 297 340 53 25 chr5 146365715 146365953 -56719579 + L2 LINE L2 1640 1889 -1425 244 118 0 0 chr5 146366066 146366100 -56719432 - L2 LINE L2 -11 3302 3269 2022 113 0 57 chr5 146366139 146366317 -56719215 - AluSx SINE Alu -12 300 146 2340 59 0 46 chr5 146366317 146366622 -56718910 - AluSq SINE Alu -22 291 1 2022 113 0 57 chr5 146366622 146366761 -56718771 - AluSx SINE Alu -166 146 1 211 320 13 13 chr5 146366893 146366971 -56718561 + L2 LINE L2 2729 2806 -508 950 136 15 65 chr5 146367029 146367228 -56718304 - MER53 DNA DNA 0 189 1 191 326 7 96 chr5 146367264 146367399 -56718133 - L2 LINE L2 -753 2561 2439 923 293 55 30 chr5 146367465 146367868 -56717664 + L2 LINE L2 1922 2334 -980 862 257 64 5 chr5 146367870 146368150 -56717382 - L1ME3 LINE L1 0 6170 5857 996 253 116 17 chr5 146368158 146368502 -56717030 + L2 LINE L2 2332 2709 -605 229 172 103 0 chr5 146368757 146368815 -56716717 - MER3 DNA MER1_type -17 192 129 1503 252 66 25 chr5 146368818 146369394 -56716138 + L2 LINE L2 2702 3313 0 388 243 28 28 chr5 146369408 146369515 -56716017 - L2 LINE L2 -979 2335 2229 204 353 93 14 chr5 146369665 146369804 -56715728 + L2 LINE L2 3164 3313 0 9047 149 27 27 chr5 146369809 146371346 -56714186 + L1M1 LINE L1 14 1551 -6014 296 335 94 2 chr5 146371749 146371926 -56713606 + MIR SINE MIR 4 197 -11 914 202 12 12 chr5 146372112 146372280 -56713252 - FAM SINE Alu -4 171 4 374 280 130 0 chr5 146373444 146373544 -56711988 - MER81 DNA DNA 0 114 2 540 343 28 36 chr5 146373659 146373910 -56711622 - MLT1K LTR MaLR -325 263 15 1267 141 0 0 chr5 146374511 146374695 -56710837 - AluY SINE Alu -127 184 1 914 143 0 0 chr5 146374698 146374831 -56710701 - AluJo/FLAM SINE Alu -169 133 1 617 295 45 45 chr5 146374845 146375133 -56710399 + L2 LINE L2 3026 3313 0 22 70 0 0 chr5 146375232 146375275 -56710257 + AT_rich Low_complexity Low_complexity 1 43 0 1025 134 0 0 chr5 146375806 146375948 -56709584 - MLT1A1 LTR MaLR 0 365 224 2259 106 0 0 chr5 146375949 146376250 -56709282 - AluSq SINE Alu -12 301 1 181 274 143 36 chr5 146376342 146376426 -56709106 + L2 LINE L2 3173 3265 -48 273 253 18 2 chr5 146377938 146378011 -56707521 - MIR SINE MIR -96 112 39 277 283 96 36 chr5 146378685 146378851 -56706681 - L3 LINE CR1 -289 1288 1113 715 244 175 50 chr5 146378852 146379355 -56706177 - LTR24B LTR ERV1 -7 569 4 1753 184 98 25 chr5 146379435 146379831 -56705701 + MLT1D LTR MaLR 1 425 -80 2070 102 0 70 chr5 146379868 146380210 -56705322 - AluYb8 SINE Alu 0 318 1 1282 148 7 92 chr5 146380213 146380244 -56705288 - MLT1D LTR MaLR -230 275 243 2107 107 21 0 chr5 146380244 146380533 -56704999 - AluSg SINE Alu -15 295 1 1282 148 7 92 chr5 146380533 146380772 -56704760 - MLT1D LTR MaLR -262 243 28 1221 280 148 34 chr5 146380802 146381416 -56704116 - L2 LINE L2 -445 2869 2186 1106 168 41 45 chr5 146381454 146381698 -56703834 - L1MC4 LINE L1 0 8042 7800 528 188 31 0 chr5 146381698 146381794 -56703738 + MER5A DNA MER1_type 1 99 -90 488 187 0 0 chr5 146381821 146381912 -56703620 - L1MC4 LINE L1 -267 7775 7685 2088 115 0 0 chr5 146382003 146382282 -56703250 + AluSx SINE Alu 15 293 -19 260 231 324 29 chr5 146382323 146382561 -56702971 - L2 LINE L2 -1357 1957 1650 842 175 0 7 chr5 146382574 146382717 -56702815 - MER5B DNA MER1_type -36 142 1 25 31 0 0 chr5 146383504 146383536 -56701996 + GC_rich Low_complexity Low_complexity 1 32 0 186 189 0 0 chr5 146383856 146383893 -56701639 + C-rich Low_complexity Low_complexity 3 39 0 249 314 128 36 chr5 146385082 146385250 -56700282 + L2 LINE L2 3006 3210 -103 2305 93 3 0 chr5 146385250 146385540 -56699992 + AluSx SINE Alu 3 293 -19 249 314 128 36 chr5 146385540 146385645 -56699887 + L2 LINE L2 3210 3304 -9 570 180 10 0 chr5 146385947 146386047 -56699485 - L1ME LINE L1 -581 5585 5485 2252 72 21 0 chr5 146386050 146386341 -56699191 - AluY SINE Alu -14 297 1 1487 117 56 28 chr5 146386341 146386590 -56698942 - Tigger2a DNA MER2_type -178 256 1 2280 84 30 0 chr5 146386765 146387063 -56698469 - AluSp SINE Alu -6 307 1 1749 142 58 42 chr5 146387335 146387665 -56697867 - MER47A DNA MER2_type -1 365 31 1743 166 3 14 chr5 146388232 146388527 -56697005 + AluJb SINE Alu 1 292 -20 277 242 55 66 chr5 146389644 146389735 -56695797 - HAL1 LINE L1 -2097 410 321 2174 101 0 16 chr5 146389762 146390070 -56695462 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 146390145 146390166 -56695366 + AT_rich Low_complexity Low_complexity 1 21 0 2006 124 28 0 chr5 146390198 146390480 -56695052 - AluSx SINE Alu -6 306 17 24 32 0 0 chr5 146390596 146390627 -56694905 + AT_rich Low_complexity Low_complexity 1 31 0 2108 97 43 0 chr5 146390801 146391099 -56694433 - AluSp SINE Alu -21 292 1 618 257 98 16 chr5 146391377 146391559 -56693973 + MLT1F LTR MaLR 1 197 -345 1956 161 18 9 chr5 146391559 146391889 -56693643 + MLT1A1 LTR MaLR 1 333 -32 1065 158 48 24 chr5 146391889 146392098 -56693434 - AluJb SINE Alu -13 299 86 240 135 0 0 chr5 146392098 146392135 -56693397 + MLT1A1 LTR MaLR 326 362 -3 1324 196 92 19 chr5 146392138 146392455 -56693077 + MLT1F LTR MaLR 199 538 -4 642 289 186 25 chr5 146392473 146392795 -56692737 + MLT1J2 LTR MaLR 36 409 -37 1863 121 16 46 chr5 146393038 146393344 -56692188 - AluSx SINE Alu -15 297 1 1622 140 9 70 chr5 146393549 146393864 -56691668 + AluJb SINE Alu 2 297 -15 344 271 69 105 chr5 146393885 146393999 -56691533 - MLT1J LTR MaLR -7 504 387 2741 7 0 0 chr5 146393999 146394304 -56691228 - AluY SINE Alu -6 305 1 344 271 69 105 chr5 146394304 146394551 -56690981 - MLT1J LTR MaLR -124 387 156 1054 174 108 0 chr5 146394966 146395179 -56690353 - AluJb SINE Alu -14 298 63 2366 86 0 0 chr5 146395345 146395648 -56689884 - AluSg SINE Alu -7 303 1 1763 115 57 7 chr5 146395657 146395953 -56689579 - L1MA5A LINE L1 -4 6293 5983 304 298 137 30 chr5 146396084 146396215 -56689317 + MIR SINE MIR 91 235 -27 303 257 29 71 chr5 146396261 146396325 -56689207 - MER94 DNA DNA 0 134 69 2447 47 3 0 chr5 146396325 146396623 -56688909 - AluY SINE Alu -12 299 1 303 257 29 71 chr5 146396623 146396698 -56688834 - MER94 DNA DNA -65 69 1 679 274 116 82 chr5 146397291 146398121 -56687411 + L2 LINE L2 2116 2973 -341 676 298 115 35 chr5 146398337 146398676 -56686856 + L3 LINE CR1 1206 1571 -6 1517 121 0 67 chr5 146398704 146398986 -56686546 + AluSp SINE Alu 2 264 -49 273 137 39 0 chr5 146399545 146399596 -56685936 + AluSp SINE Alu 242 294 -9 26 0 0 0 chr5 146399932 146399958 -56685574 + AT_rich Low_complexity Low_complexity 1 26 0 2297 60 0 3 chr5 146399958 146400269 -56685263 - AluY SINE Alu 0 310 1 186 43 0 0 chr5 146400809 146400832 -56684700 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2070 165 71 29 chr5 146400934 146401382 -56684150 + MLT1C LTR MaLR 1 467 0 841 127 0 113 chr5 146402278 146402569 -56682963 + AluSq SINE Alu 9 266 -47 24 0 0 0 chr5 146402587 146402611 -56682921 + AT_rich Low_complexity Low_complexity 1 24 0 316 280 78 72 chr5 146404072 146404365 -56681167 - L1MEd LINE L1 -5034 1085 791 620 103 0 21 chr5 146404513 146404610 -56680922 - AluY SINE Alu -211 100 6 300 200 57 0 chr5 146404620 146404690 -56680842 - MER94 DNA DNA -60 74 1 240 287 54 54 chr5 146405283 146405450 -56680082 + L2 LINE L2 2116 2282 -1032 324 222 51 17 chr5 146405682 146405799 -56679733 - AluSq/x SINE Alu -179 123 3 240 307 68 23 chr5 146405902 146406078 -56679454 + L2 LINE L2 2218 2401 -913 1748 153 0 0 chr5 146406254 146406522 -56679010 + AluSx SINE Alu 35 302 -10 771 205 13 0 chr5 146406547 146406698 -56678834 + AluSg SINE Alu 3 155 -155 698 258 58 27 chr5 146407009 146407234 -56678298 + MER46C DNA MER2_type 50 281 -57 900 169 164 15 chr5 146407237 146407438 -56678094 - MSTD LTR MaLR 0 396 166 319 143 0 18 chr5 146407482 146407538 -56677994 - MSTD LTR MaLR -341 55 1 277 237 0 0 chr5 146407538 146407596 -56677936 + MER46C DNA MER2_type 280 337 -1 3748 233 34 46 chr5 146408333 146409243 -56676289 + L1M4b LINE L1 227 1125 -5734 1979 142 0 0 chr5 146409246 146409542 -56675990 + AluSx SINE Alu 6 301 -11 1288 189 47 27 chr5 146409554 146409850 -56675682 + L1M4b LINE L1 1314 1615 -5244 414 288 27 4 chr5 146409870 146409999 -56675533 + FLAM_A SINE Alu 1 112 -21 10578 59 3 1 chr5 146410252 146411594 -56673938 + L1P LINE L1 3312 4656 -1490 801 175 0 0 chr5 146411717 146411854 -56673678 - MLT1C-int LTR MaLR -1234 137 1 301 98 0 0 chr5 146411854 146411895 -56673637 - MLT1C LTR MaLR 0 467 427 * 535 187 11 0 chr5 146411891 146411982 -56673550 - MLT1D LTR MaLR -412 93 2 333 0 0 0 chr5 146412013 146412050 -56673482 + (TG)n Simple_repeat Simple_repeat 2 38 0 590 117 53 0 chr5 146413394 146413488 -56672044 - Tigger1 DNA MER2_type -1218 1200 1102 2080 110 3 0 chr5 146413493 146413783 -56671749 - AluSp SINE Alu -11 302 12 261 0 0 0 chr5 146413820 146413849 -56671683 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1194 149 0 5 chr5 146413849 146414045 -56671487 - AluJb SINE Alu -32 280 86 2026 82 11 7 chr5 146414045 146414354 -56671178 - AluSx SINE Alu 0 311 2 2983 230 50 5 chr5 146414368 146415132 -56670400 - L1MC4a LINE L1 -2 7806 7009 186 133 0 0 chr5 146415637 146415667 -56669865 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1014 199 62 0 chr5 146416371 146416547 -56668985 - Charlie3 DNA MER1_type -2523 187 1 549 200 52 67 chr5 146418131 146418350 -56667182 + L1M4 LINE L1 5198 5413 -751 264 273 115 43 chr5 146418353 146418492 -56667040 + L1M4b LINE L1 29 177 -6682 302 217 148 35 chr5 146420441 146420556 -56664976 - MIR SINE MIR -6 256 129 29 0 0 0 chr5 146420814 146420843 -56664689 + AT_rich Low_complexity Low_complexity 1 29 0 188 35 35 0 chr5 146421262 146421291 -56664241 + (TG)n Simple_repeat Simple_repeat 1 30 0 1450 194 3 0 chr5 146421515 146421798 -56663734 - AluJo SINE Alu -26 286 3 391 289 10 0 chr5 146422501 146422598 -56662934 - L2 LINE L2 -12 3301 3204 291 277 102 51 chr5 146423803 146424011 -56661521 - L1MC/D LINE L1 -554 5567 5387 346 90 0 0 chr5 146425948 146426000 -56659532 - AluS SINE Alu -210 93 50 251 298 85 32 chr5 146426694 146426788 -56658744 + MIR SINE MIR 164 262 0 242 328 70 39 chr5 146427662 146427790 -56657742 + MIR SINE MIR 22 153 -55 207 248 83 46 chr5 146429285 146429394 -56656138 - L2 LINE L2 -27 3245 3133 2084 117 0 3 chr5 146431856 146432156 -56653376 + AluSq SINE Alu 1 299 -14 1977 109 0 7 chr5 146432162 146432447 -56653085 + AluSc SINE Alu 2 284 -25 237 219 94 0 chr5 146432477 146432541 -56652991 + L1M4 LINE L1 4749 4818 -1328 384 289 78 33 chr5 146432998 146433178 -56652354 + MIR SINE MIR 5 192 -70 1156 278 168 4 chr5 146433226 146433701 -56651831 + L2 LINE L2 971 1523 -1791 1286 180 45 0 chr5 146433706 146433950 -56651582 - AluSx SINE Alu -57 255 1 2020 125 0 0 chr5 146434592 146434887 -56650645 - AluSg1 SINE Alu -14 295 1 450 267 14 34 chr5 146434891 146435037 -56650495 + LTR16C LTR ERVL 349 491 0 291 333 51 37 chr5 146435061 146435277 -56650255 + HERVL LTR ERVL 488 706 -4948 418 307 64 44 chr5 146435517 146435768 -56649764 + HERVL LTR ERVL 968 1223 -3773 234 132 38 75 chr5 146435910 146435930 -56649602 + AluSg/x SINE Alu 118 135 -165 262 59 0 0 chr5 146435930 146435964 -56649568 + Alu SINE Alu 3 36 -267 1275 216 0 0 chr5 146436607 146436885 -56648647 + AluSx SINE Alu 5 282 -30 786 254 63 30 chr5 146436944 146437212 -56648320 + L1M4b LINE L1 1339 1615 -5244 390 248 51 8 chr5 146437245 146437362 -56648170 + FLAM_C SINE Alu 9 130 -3 321 330 15 38 chr5 146437368 146437635 -56647897 + L1M4b LINE L1 1623 1883 -4972 7136 191 17 28 chr5 146437739 146439295 -56646237 - L1P LINE L1 -3986 2160 622 531 264 98 12 chr5 146440440 146440603 -56644929 - MER5B DNA MER1_type -1 177 1 966 316 30 18 chr5 146444191 146445185 -56640347 + HERVL LTR ERVL 1515 2863 -2901 284 214 0 0 chr5 146445301 146445371 -56640161 - L1MC5 LINE L1 -129 7832 7763 1036 333 48 62 chr5 146445475 146445882 -56639650 + HERVL LTR ERVL 3051 3462 -2302 1791 130 60 33 chr5 146445882 146446182 -56639350 + AluJb SINE Alu 1 308 -4 1036 333 48 62 chr5 146446182 146446636 -56638896 + HERVL LTR ERVL 3462 3900 -1864 1348 181 4 16 chr5 146446794 146447042 -56638490 + MER96B DNA MER1_type? 3 247 -170 492 267 25 0 chr5 146447241 146447361 -56638171 + MER94 DNA DNA 6 128 -6 225 279 198 0 chr5 146450362 146450448 -56635084 + MIR SINE MIR 15 117 -145 2287 108 0 3 chr5 146451347 146451654 -56633878 + AluSx SINE Alu 1 306 -6 784 167 26 116 chr5 146451654 146451963 -56633569 - L1M LINE L1 -847 5299 5033 * 3763 244 59 10 chr5 146451947 146452515 -56633017 - L1M4 LINE L1 -2847 3535 2996 1606 199 23 7 chr5 146452515 146452822 -56632710 + AluJo SINE Alu 1 312 0 3763 244 59 10 chr5 146452822 146453773 -56631759 - L1M4 LINE L1 -3386 2996 1945 1218 275 45 34 chr5 146455838 146456194 -56629338 + L1M4c LINE L1 421 780 -5523 3886 243 79 18 chr5 146456485 146457871 -56627661 + L1M4c LINE L1 1052 2530 -3852 2078 180 12 0 chr5 146457926 146458326 -56627206 + L1MB2 LINE L1 5766 6170 -1 281 282 61 33 chr5 146458579 146458760 -56626772 - L1MC4a LINE L1 -1921 5887 5702 225 219 16 114 chr5 146458795 146458918 -56626614 - HAL1 LINE L1 -1167 1340 1230 366 343 18 18 chr5 146459093 146459262 -56626270 - MER5A DNA MER1_type -19 170 2 918 242 26 0 chr5 146460469 146460663 -56624869 + MER3 DNA MER1_type 9 207 -2 275 229 0 0 chr5 146460624 146460672 -56624860 - MER3 DNA MER1_type -121 88 41 * 232 266 31 0 chr5 146460765 146460829 -56624703 + Charlie8 DNA MER1_type 178 243 -2174 1552 168 125 0 chr5 146462485 146462806 -56622726 + MER46B DNA MER2_type 1 236 0 222 368 103 0 chr5 146462921 146463076 -56622456 + L3 LINE CR1 1064 1234 -343 233 241 120 30 chr5 146463698 146463831 -56621701 - L1ME4a LINE L1 -17 6104 5960 300 296 52 0 chr5 146463853 146463968 -56621564 - L1MC4a LINE L1 -392 5729 5609 243 319 55 57 chr5 146464211 146464438 -56621094 - MIR3 SINE MIR -30 232 5 528 287 89 53 chr5 146464721 146465157 -56620375 - Charlie8 DNA MER1_type -2131 286 1 1711 70 0 24 chr5 146467514 146467727 -56617805 - AluSp SINE Alu -105 208 1 303 100 0 0 chr5 146468501 146468541 -56616991 - MER103 DNA DNA -63 103 64 51 0 0 0 chr5 146468547 146468598 -56616934 + AT_rich Low_complexity Low_complexity 1 51 0 201 147 0 0 chr5 146469206 146469240 -56616292 + (CAT)n Simple_repeat Simple_repeat 2 35 0 24 32 0 0 chr5 146469309 146469340 -56616192 + AT_rich Low_complexity Low_complexity 1 31 0 480 48 0 0 chr5 146469663 146469726 -56615806 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 0 0 0 chr5 146469786 146469810 -56615722 + AT_rich Low_complexity Low_complexity 1 24 0 186 294 92 34 chr5 146469892 146470011 -56615521 + MIR SINE MIR 137 262 0 350 300 45 0 chr5 146470038 146470148 -56615384 + L2 LINE L2 3142 3256 -16 33 66 0 0 chr5 146470623 146470684 -56614848 + AT_rich Low_complexity Low_complexity 1 61 0 310 67 0 0 chr5 146472505 146472550 -56612982 - AluSc SINE Alu 0 299 255 2018 51 4 62 chr5 146472551 146472825 -56612707 - AluY SINE Alu -28 283 26 267 207 73 24 chr5 146472836 146472918 -56612614 - L1M4 LINE L1 -1446 4700 4615 241 266 96 0 chr5 146473151 146473245 -56612287 - MER5B DNA MER1_type -75 103 1 2097 70 0 0 chr5 146473673 146473929 -56611603 - AluY SINE Alu 0 311 56 483 33 0 0 chr5 146474007 146474068 -56611464 + (TG)n Simple_repeat Simple_repeat 2 62 0 1472 271 38 5 chr5 146475774 146476173 -56609359 + LTR16A LTR ERVL 33 444 -6 4620 185 120 4 chr5 146476188 146477200 -56608332 + HERV16 LTR ERVL 10 1138 -3858 823 189 77 0 chr5 146477266 146477435 -56608097 + HERV16 LTR ERVL 1253 1434 -3562 6076 213 103 23 chr5 146477485 146478956 -56606576 + HERV16 LTR ERVL 1573 3207 -1900 961 283 70 30 chr5 146478985 146479388 -56606144 + HERV16 LTR ERVL 3280 3698 -2066 793 385 27 19 chr5 146479387 146480023 -56605509 + HERV16 LTR ERVL 4250 4890 -595 * 315 262 221 0 chr5 146480500 146480672 -56604860 - MER63A DNA MER1_type 0 210 1 1543 198 89 34 chr5 146480785 146481112 -56604420 + LTR16A LTR ERVL 106 491 0 208 372 70 0 chr5 146484951 146485037 -56600495 + MER91A DNA MER1_type 105 196 0 228 249 194 7 chr5 146486433 146486578 -56598954 + MIR SINE MIR 45 214 -48 216 0 0 0 chr5 146487659 146487683 -56597849 + (CCCGG)n Simple_repeat Simple_repeat 4 27 0 209 246 43 0 chr5 146490221 146490290 -56595242 - MIR SINE MIR -111 151 80 515 293 52 42 chr5 146490336 146490548 -56594984 + LTR67 LTR ERVL 48 261 -296 242 216 11 68 chr5 146490647 146490735 -56594797 + LTR67 LTR ERVL 475 557 0 321 263 95 58 chr5 146491059 146491196 -56594336 - L1ME4a LINE L1 -1 6120 5979 427 192 0 67 chr5 146491205 146491272 -56594260 - MIR SINE MIR 0 262 203 1635 165 40 65 chr5 146491272 146491672 -56593860 + MLT1B LTR MaLR 1 390 0 427 192 0 67 chr5 146491672 146491708 -56593824 - MIR SINE MIR -59 203 166 180 133 0 0 chr5 146491729 146491759 -56593773 + L2 LINE L2 3284 3313 0 1819 93 0 31 chr5 146491814 146492073 -56593459 - AluSq SINE Alu -62 251 1 586 204 28 0 chr5 146492167 146492275 -56593257 - L2 LINE L2 0 3313 3203 480 301 93 47 chr5 146492636 146492915 -56592617 + L1ME4a LINE L1 5015 5306 -840 772 275 125 10 chr5 146493434 146493819 -56591713 + L1ME4a LINE L1 5691 6119 -2 304 268 94 98 chr5 146494720 146494996 -56590536 + L1ME4a LINE L1 3555 3829 -2317 578 186 93 17 chr5 146495734 146495852 -56589680 - MIR SINE MIR -62 146 20 328 306 91 0 chr5 146497419 146497638 -56587894 + L1ME4a LINE L1 4358 4596 -1550 25 51 0 0 chr5 146497831 146497870 -56587662 + AT_rich Low_complexity Low_complexity 1 39 0 669 272 144 39 chr5 146497919 146498378 -56587154 + L1ME4a LINE L1 5318 5824 -297 522 167 196 0 chr5 146498444 146498546 -56586986 - L2 LINE L2 0 3313 3192 407 198 42 10 chr5 146498668 146498764 -56586768 + L1ME4a LINE L1 6023 6121 0 186 246 157 78 chr5 146499541 146499732 -56585800 + L2 LINE L2 219 424 -2890 1124 276 120 26 chr5 146500709 146501282 -56584250 + L2 LINE L2 1707 2333 -981 646 295 188 22 chr5 146501606 146502381 -56583151 + L2 LINE L2 2404 3300 -13 194 248 150 26 chr5 146503404 146503517 -56582015 + L2 LINE L2 2875 3001 -271 2052 132 0 3 chr5 146503590 146503900 -56581632 - AluJb SINE Alu -3 309 1 740 248 33 85 chr5 146503925 146504232 -56581300 + L2 LINE L2 3022 3312 -1 181 339 89 18 chr5 146504233 146504345 -56581187 + L2 LINE L2 3133 3252 -20 337 233 37 111 chr5 146504767 146504956 -56580576 + L1 LINE L1 4874 5048 -1098 870 200 16 16 chr5 146505018 146505203 -56580329 + L1ME1 LINE L1 5641 5825 -341 1817 166 0 7 chr5 146505207 146505509 -56580023 - AluSx SINE Alu -12 300 1 679 234 35 12 chr5 146505510 146505681 -56579851 - L1ME3 LINE L1 -11 6151 5977 300 214 27 27 chr5 146505876 146505988 -56579544 + GA-rich Low_complexity Low_complexity 3 114 0 389 296 145 65 chr5 146506010 146506425 -56579107 - L2 LINE L2 -5 3267 2820 251 305 109 41 chr5 146506455 146506848 -56578684 - L2 LINE L2 -566 2748 2329 277 24 48 0 chr5 146507457 146507499 -56578033 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 468 241 89 87 chr5 146508526 146509000 -56576532 + L1MEd LINE L1 634 1108 -5011 234 91 0 0 chr5 146509020 146509053 -56576479 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 581 308 39 13 chr5 146509055 146509496 -56576036 + L1ME3A LINE L1 1175 1828 -4779 3648 263 84 87 chr5 146509659 146509943 -56575589 + L1ME3A LINE L1 2074 2357 -4069 209 56 0 28 chr5 146509943 146509979 -56575553 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3648 263 84 87 chr5 146509979 146510659 -56574873 + L1ME3A LINE L1 2357 3038 -3388 1366 127 97 27 chr5 146510659 146510959 -56574573 + MER33 DNA MER1_type 4 324 0 3648 263 84 87 chr5 146510959 146511224 -56574308 + L1ME3A LINE L1 3038 3302 -3124 747 206 61 17 chr5 146511224 146511404 -56574128 + MER58A DNA MER1_type 27 214 -10 3648 263 84 87 chr5 146511404 146511518 -56574014 + L1ME3A LINE L1 3302 3415 -3011 1868 132 10 7 chr5 146511518 146511821 -56573711 + AluSx SINE Alu 1 304 -8 3648 263 84 87 chr5 146511821 146512320 -56573212 + L1ME3A LINE L1 3415 3914 -2512 487 244 55 0 chr5 146512320 146512447 -56573085 + MER94 DNA DNA 1 134 0 3648 263 84 87 chr5 146512447 146513206 -56572326 + L1ME3A LINE L1 3914 4813 -1613 192 40 0 0 chr5 146513206 146513231 -56572301 + (CA)n Simple_repeat Simple_repeat 2 26 0 3648 263 84 87 chr5 146513231 146513801 -56571731 + L1ME3A LINE L1 4813 5383 -1043 22489 173 34 15 chr5 146513814 146520748 -56564784 - L1PA13 LINE L1 -4 7597 1 337 240 78 0 chr5 146520766 146520895 -56564637 + L1ME3A LINE L1 5419 5557 -869 918 180 11 11 chr5 146520902 146521080 -56564452 + AluJo SINE Alu 119 296 -16 270 281 66 0 chr5 146521093 146521214 -56564318 + L1ME3A LINE L1 5591 5719 -682 * 789 173 129 0 chr5 146521213 146521352 -56564180 - L1PA12 LINE L1 -6696 885 729 414 261 73 51 chr5 146521363 146521393 -56564139 + L1ME3A LINE L1 5734 5762 -688 2086 111 3 3 chr5 146521393 146521690 -56563842 + AluSx SINE Alu 1 297 -15 414 261 73 51 chr5 146521690 146521852 -56563680 + L1ME3A LINE L1 5762 5927 -523 2309 159 78 30 chr5 146521878 146522311 -56563221 - MLT1D LTR MaLR -30 475 22 232 170 0 0 chr5 146522429 146522476 -56563056 + L1ME3A LINE L1 6196 6242 -208 207 100 0 0 chr5 146522548 146522578 -56562954 + (A)n Simple_repeat Simple_repeat 1 30 0 363 327 35 74 chr5 146522596 146522798 -56562734 + L1ME3A LINE L1 6242 6435 -15 26 0 0 0 chr5 146522798 146522824 -56562708 + AT_rich Low_complexity Low_complexity 1 26 0 2807 128 49 30 chr5 146523502 146523755 -56561777 - L1MB3 LINE L1 0 6183 5936 1793 150 0 14 chr5 146523755 146524070 -56561462 + AluSx SINE Alu 1 311 0 2807 128 49 30 chr5 146524070 146524280 -56561252 - L1MB3 LINE L1 -247 5936 5707 1934 179 22 3 chr5 146524280 146524637 -56560895 + MLT1A1 LTR MaLR 2 365 0 2807 128 49 30 chr5 146524637 146524664 -56560868 - L1MB3 LINE L1 -476 5707 5682 316 247 0 26 chr5 146525158 146525235 -56560297 - MER81 DNA DNA -20 94 20 764 147 84 89 chr5 146525611 146525802 -56559730 + LTR47A LTR ERVL 261 450 -2 2168 112 0 3 chr5 146528015 146528329 -56557203 + AluSq SINE Alu 1 313 0 198 345 122 30 chr5 146531745 146531942 -56553590 + L2 LINE L2 2973 3187 -85 204 259 25 25 chr5 146533223 146533304 -56552228 + L2 LINE L2 1340 1420 -1894 292 313 128 5 chr5 146533531 146533742 -56551790 + L2 LINE L2 1715 1951 -1363 557 286 96 27 chr5 146533805 146534025 -56551507 + MIR SINE MIR 24 258 -4 1320 149 0 5 chr5 146534287 146534495 -56551037 - AluJb SINE Alu -22 290 84 378 244 22 0 chr5 146534913 146535003 -56550529 - MER5A DNA MER1_type -82 107 16 207 215 54 15 chr5 146535022 146535115 -56550417 + L2 LINE L2 3134 3268 -4 513 280 88 16 chr5 146537104 146537286 -56548246 + MIR SINE MIR 56 250 -12 2119 89 24 3 chr5 146537847 146538139 -56547393 - AluSx SINE Alu -14 298 1 225 83 0 0 chr5 146539094 146539130 -56546402 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 393 283 163 5 chr5 146539484 146539668 -56545864 - MIR SINE MIR -27 235 23 429 204 3 0 chr5 146541508 146541592 -56543940 + MLT1A1 LTR MaLR 1 85 -280 214 247 86 32 chr5 146542893 146542986 -56542546 - MIR SINE MIR -69 193 96 190 271 99 26 chr5 146545307 146545458 -56540074 + L2 LINE L2 2264 2425 -889 206 340 41 0 chr5 146546174 146546271 -56539261 - MIR SINE MIR -63 145 45 202 359 87 0 chr5 146547496 146547599 -56537933 + L2 LINE L2 3200 3311 -2 209 106 0 21 chr5 146552133 146552180 -56533352 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 146552216 146552238 -56533294 + AT_rich Low_complexity Low_complexity 1 22 0 250 206 32 0 chr5 146557064 146557127 -56528405 + MIR SINE MIR 68 132 -76 1599 257 30 45 chr5 146559798 146560195 -56525337 - L1ME3 LINE L1 -2 6160 5773 1767 174 3 26 chr5 146560195 146560506 -56525026 + AluJo SINE Alu 1 304 -8 1599 257 30 45 chr5 146560506 146560684 -56524848 - L1ME3 LINE L1 -389 5773 5594 2316 91 0 7 chr5 146560747 146561045 -56524487 + AluY SINE Alu 1 296 -15 307 235 235 0 chr5 146561604 146561706 -56523826 - L2 LINE L2 0 3313 3188 1506 208 95 0 chr5 146564223 146564529 -56521003 - LTR16A LTR ERVL 0 491 116 284 262 221 0 chr5 146564663 146564835 -56520697 + MER63A DNA MER1_type 1 210 0 923 403 17 8 chr5 146565312 146565954 -56519578 - HERV16 LTR ERVL -595 4890 4243 * 971 287 69 29 chr5 146565947 146566355 -56519177 - HERV16 LTR ERVL -2066 3698 3275 5818 218 102 22 chr5 146566371 146567850 -56517682 - HERV16 LTR ERVL -1900 3096 1573 777 189 77 0 chr5 146567900 146568069 -56517463 - HERV16 LTR ERVL -3562 1434 1253 4383 186 120 4 chr5 146568135 146569147 -56516385 - HERV16 LTR ERVL -3858 1138 10 1426 271 38 5 chr5 146569162 146569561 -56515971 - LTR16A LTR ERVL -6 444 33 189 363 30 0 chr5 146570305 146570440 -56515092 - L2 LINE L2 -1170 2144 2006 297 0 0 0 chr5 146572043 146572076 -56513456 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 632 237 137 32 chr5 146572076 146572247 -56513285 - L2 LINE L2 -13 3300 3148 1145 130 47 16 chr5 146572247 146572439 -56513093 + L1PB4 LINE L1 5957 6154 -2 632 237 137 32 chr5 146572439 146572545 -56512987 - L2 LINE L2 -165 3148 2994 297 297 172 7 chr5 146572547 146572692 -56512840 - L2 LINE L2 -601 2713 2545 1409 82 111 0 chr5 146574067 146574274 -56511258 + MER30 DNA MER1_type 1 230 0 287 283 0 40 chr5 146574971 146575070 -56510462 - MIR SINE MIR 0 262 168 * 332 131 66 0 chr5 146575065 146575126 -56510406 + MIR SINE MIR 106 170 -92 235 183 247 0 chr5 146575559 146575652 -56509880 - MIR SINE MIR -11 251 136 * 2157 260 62 22 chr5 146575635 146576584 -56508948 + L2 LINE L2 2323 3313 0 201 74 0 0 chr5 146577519 146577546 -56507986 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1353 127 13 38 chr5 146580529 146580765 -56504767 + MER30 DNA MER1_type 1 230 0 259 362 0 9 chr5 146580987 146581092 -56504440 + L2 LINE L2 3210 3313 0 276 351 101 12 chr5 146581968 146582136 -56503396 - L2 LINE L2 -17 3255 3073 327 287 222 0 chr5 146582235 146582465 -56503067 + L1M4 LINE L1 3739 4019 -2127 2068 123 19 36 chr5 146582465 146582774 -56502758 + AluSx SINE Alu 1 304 -8 16147 34 17 0 chr5 146582777 146585570 -56499962 + L1PA4 LINE L1 3343 6151 -4 242 245 53 11 chr5 146586072 146586166 -56499366 - MLT1L LTR MaLR -7 608 511 22 0 0 0 chr5 146586294 146586316 -56499216 + AT_rich Low_complexity Low_complexity 1 22 0 309 135 0 0 chr5 146587821 146587873 -56497659 + (TG)n Simple_repeat Simple_repeat 1 52 0 1013 167 14 47 chr5 146588023 146588238 -56497294 + MER3 DNA MER1_type 2 209 0 5301 128 86 19 chr5 146588733 146589096 -56496436 + Tigger2 DNA MER2_type 631 968 -1750 2027 148 0 13 chr5 146589096 146589401 -56496131 + AluSx SINE Alu 1 301 -11 5301 128 86 19 chr5 146589401 146589967 -56495565 + Tigger2 DNA MER2_type 968 1622 -1096 1567 181 11 18 chr5 146590183 146590460 -56495072 + AluJo SINE Alu 1 275 -37 221 377 61 30 chr5 146590762 146591123 -56494409 + L2 LINE L2 2889 3260 -12 181 333 0 16 chr5 146591117 146591180 -56494352 - L2 LINE L2 -1 3271 3210 * 804 320 157 7 chr5 146591382 146592010 -56493522 - L2 LINE L2 -37 3276 2543 29577 108 19 51 chr5 146592546 146598915 -56486617 + L1PA7 LINE L1 1 6152 -2 576 246 32 60 chr5 146598938 146599066 -56486466 + L1MCc LINE L1 33 152 -6271 2290 115 0 7 chr5 146599066 146599370 -56486162 + AluSx SINE Alu 1 302 -10 576 246 32 60 chr5 146599370 146599489 -56486043 + L1MCc LINE L1 152 273 -6150 27619 122 18 16 chr5 146599524 146605930 -56479602 - L1PA8 LINE L1 -2 6485 27 469 269 8 22 chr5 146605938 146606072 -56479460 + L1MCc LINE L1 292 423 -6000 2109 132 3 7 chr5 146606203 146606525 -56479007 + AluSx SINE Alu 1 312 0 696 226 85 71 chr5 146606585 146606925 -56478607 + L1MCc LINE L1 871 1215 -5208 1031 33 0 0 chr5 146607013 146607135 -56478397 - L1PA7 LINE L1 -5 6149 6028 250 226 24 0 chr5 146607153 146607237 -56478295 + L1MCc LINE L1 1808 1893 -5048 618 148 157 0 chr5 146607244 146607352 -56478180 + FLAM_C SINE Alu 5 129 -4 46 33 0 0 chr5 146607352 146607412 -56478120 + AT_rich Low_complexity Low_complexity 1 60 0 558 285 17 26 chr5 146607412 146607714 -56477818 + L1MCc LINE L1 1883 2181 -4760 1208 175 18 0 chr5 146607730 146607958 -56477574 - L1MC1 LINE L1 -25 6588 6357 1540 127 0 0 chr5 146607963 146608168 -56477364 + AluSx SINE Alu 5 209 -103 1844 143 6 34 chr5 146608168 146608519 -56477013 - L1MC1 LINE L1 -434 6179 5839 10325 144 107 25 chr5 146608520 146610059 -56475473 - L1MC1 LINE L1 -4000 2426 646 2173 117 0 0 chr5 146610059 146610358 -56475174 - AluSx SINE Alu -13 299 1 10325 144 107 25 chr5 146610358 146611055 -56474477 - L1MC1 LINE L1 -5780 646 7 1461 238 73 15 chr5 146611043 146611459 -56474073 + L1MCc LINE L1 2369 2885 -4237 * 3342 32 2 5 chr5 146611459 146611869 -56473663 + L1PA4 LINE L1 5743 6151 -4 1461 238 73 15 chr5 146611869 146612115 -56473417 + L1MCc LINE L1 2885 3115 -4007 5054 152 7 18 chr5 146612119 146612340 -56473192 + L1MC2 LINE L1 5186 5408 -936 2131 123 0 0 chr5 146612340 146612633 -56472899 + AluSg SINE Alu 1 293 -17 5054 152 7 18 chr5 146612633 146613406 -56472126 + L1MC2 LINE L1 5408 6170 -174 1529 92 0 37 chr5 146613443 146613660 -56471872 + AluSg/x SINE Alu 76 284 -26 708 194 56 0 chr5 146613666 146613846 -56471686 + L1MC2 LINE L1 6155 6344 0 * 2367 199 28 38 chr5 146613840 146613947 -56471585 + L1MCc LINE L1 3065 3172 -3769 222 62 0 0 chr5 146613947 146613979 -56471553 + (TA)n Simple_repeat Simple_repeat 1 32 0 2367 199 28 38 chr5 146613979 146614586 -56470946 + L1MCc LINE L1 3172 3772 -3169 1623 212 138 4 chr5 146614586 146615063 -56470469 + L1MD3 LINE L1 7450 7990 -5 513 304 52 0 chr5 146615078 146615308 -56470224 + L1MCc LINE L1 3770 4011 -2930 * 4220 170 27 18 chr5 146615305 146617000 -56468532 + L1PB1 LINE L1 4436 6143 -8 1163 253 153 11 chr5 146617008 146617558 -56467974 + L1MCc LINE L1 3991 4618 -2323 1176 72 83 0 chr5 146617558 146617738 -56467794 + Tigger1 DNA MER2_type 899 1093 -1325 426 152 0 0 chr5 146617735 146617801 -56467731 + Tigger1 DNA MER2_type 2352 2417 -1 * 936 220 50 32 chr5 146617801 146618078 -56467454 + Charlie2a DNA MER1_type 400 681 -2181 694 169 13 13 chr5 146618156 146618310 -56467222 + Charlie2a DNA MER1_type 629 782 -2080 25 0 0 0 chr5 146619644 146619669 -56465863 + AT_rich Low_complexity Low_complexity 1 25 0 1616 274 56 11 chr5 146619681 146620203 -56465329 + L1ME LINE L1 20 564 -5506 587 153 0 0 chr5 146620205 146620290 -56465242 + AluS SINE Alu 1 85 -227 1120 267 72 31 chr5 146620290 146620912 -56464620 + L1ME LINE L1 556 1188 -4892 * 1339 191 68 3 chr5 146620897 146621222 -56464310 + L1MA5 LINE L1 4748 5093 -1053 6443 42 4 6 chr5 146621271 146622098 -56463434 - L1PA6 LINE L1 -3 6151 5327 5829 115 34 7 chr5 146622131 146623292 -56462240 + L1MA5 LINE L1 5110 6300 0 445 228 211 0 chr5 146624124 146624238 -56461294 + MER5A DNA MER1_type 50 187 -2 23 54 0 0 chr5 146624861 146624898 -56460634 + AT_rich Low_complexity Low_complexity 1 37 0 1662 174 105 9 chr5 146625142 146625475 -56460057 - MLT1A1 LTR MaLR 0 365 1 405 277 31 15 chr5 146626111 146626241 -56459291 - MIR SINE MIR -116 146 15 2155 124 10 0 chr5 146626398 146626705 -56458827 + AluSx SINE Alu 1 310 -2 220 355 9 37 chr5 146627068 146627175 -56458357 - L3 LINE CR1 -80 1497 1394 30247 106 15 51 chr5 146627181 146629089 -56456443 - L1PA7 LINE L1 -7 6147 4173 2262 96 0 34 chr5 146629089 146629411 -56456121 - AluY SINE Alu 0 311 1 30247 106 15 51 chr5 146629411 146633875 -56451657 - L1PA7 LINE L1 -1981 4173 12 455 252 60 62 chr5 146634792 146634842 -56450690 - L1M4 LINE L1 -3081 3065 3016 24933 28 1 0 chr5 146634842 146638604 -56446928 + L1PA3 LINE L1 2390 6154 -1 455 252 60 62 chr5 146638604 146638938 -56446594 - L1M4 LINE L1 -3130 3016 2682 206 207 86 0 chr5 146639000 146639058 -56446474 + (CTTTG)n Simple_repeat Simple_repeat 3 65 0 302 290 80 0 chr5 146639180 146639356 -56446176 - L1M4 LINE L1 -3769 2377 2188 514 282 47 68 chr5 146639372 146639606 -56445926 + L2 LINE L2 3085 3313 0 4856 150 31 48 chr5 146639923 146640766 -56444766 - L1MB7 LINE L1 -9 6175 5343 2322 78 0 0 chr5 146640766 146641075 -56444457 + AluSq SINE Alu 1 309 0 4856 150 31 48 chr5 146641075 146641381 -56444151 - L1MB7 LINE L1 -841 5343 5033 3873 239 84 16 chr5 146641382 146641929 -56443603 - L1M4 LINE L1 -2864 4093 3585 1646 191 23 7 chr5 146641929 146642228 -56443304 + AluJo SINE Alu 1 304 -8 3873 239 84 16 chr5 146642228 146643580 -56441952 - L1M4 LINE L1 -3372 3585 2326 2786 17 0 0 chr5 146643580 146643880 -56441652 - AluY SINE Alu -11 300 1 1667 162 70 0 chr5 146643886 146644158 -56441374 - AluJb SINE Alu -21 291 1 3873 239 84 16 chr5 146644158 146644748 -56440784 - L1M4 LINE L1 -4635 2322 1420 535 291 74 20 chr5 146644775 146645112 -56440420 + L2 LINE L2 2757 3129 -184 2403 106 0 0 chr5 146645674 146645986 -56439546 - AluSx SINE Alu 0 312 1 267 317 119 38 chr5 146646035 146646368 -56439164 + L2 LINE L2 2705 3053 -219 6506 222 44 25 chr5 146646440 146646557 -56438975 + L1ME2 LINE L1 2183 2296 -3850 2139 129 3 0 chr5 146646557 146646851 -56438681 + AluSx SINE Alu 1 295 -17 6506 222 44 25 chr5 146646851 146648466 -56437066 + L1ME2 LINE L1 2296 3956 -2190 1956 133 0 14 chr5 146648466 146648786 -56436746 + AluSx SINE Alu 1 316 0 6506 222 44 25 chr5 146648786 146648920 -56436612 + L1ME2 LINE L1 3956 4086 -2060 720 187 22 0 chr5 146648922 146649056 -56436476 + L1ME2 LINE L1 4594 4730 -1416 257 239 57 23 chr5 146649358 146649446 -56436086 - MIR SINE MIR -111 151 61 1380 267 82 22 chr5 146649884 146650258 -56435274 + L1ME2 LINE L1 5173 5523 -641 2092 142 7 0 chr5 146650258 146650561 -56434971 + AluSx SINE Alu 1 305 -7 1380 267 82 22 chr5 146650561 146650927 -56434605 + L1ME2 LINE L1 5523 5955 -209 23 33 0 0 chr5 146650935 146650965 -56434567 + AT_rich Low_complexity Low_complexity 1 30 0 904 188 66 10 chr5 146651141 146651338 -56434194 + MER3 DNA MER1_type 2 209 0 248 200 0 0 chr5 146651376 146651426 -56434106 - MER20 DNA MER1_type -4 215 166 24 53 0 0 chr5 146651519 146651557 -56433975 + AT_rich Low_complexity Low_complexity 1 38 0 200 132 78 0 chr5 146651765 146651894 -56433638 + (TA)n Simple_repeat Simple_repeat 1 139 0 231 50 25 25 chr5 146651894 146651934 -56433598 + (TATAA)n Simple_repeat Simple_repeat 3 42 0 745 90 60 0 chr5 146651935 146652488 -56433044 + (TA)n Simple_repeat Simple_repeat 1 586 0 431 167 56 93 chr5 146652511 146652581 -56432951 - MER20 DNA MER1_type -115 104 38 2115 135 12 26 chr5 146652581 146652922 -56432610 + MER1B DNA MER1_type 2 337 0 431 167 56 93 chr5 146652922 146652959 -56432573 - MER20 DNA MER1_type -181 38 1 208 185 108 15 chr5 146653090 146653155 -56432377 + MIR SINE MIR 117 187 -75 22 0 0 0 chr5 146653726 146653748 -56431784 + AT_rich Low_complexity Low_complexity 1 22 0 2068 138 7 7 chr5 146654022 146654318 -56431214 - AluSx SINE Alu -16 296 1 1163 92 0 0 chr5 146654986 146655128 -56430404 + AluSq/x SINE Alu 1 142 -171 1679 205 54 45 chr5 146655130 146655669 -56429863 - LTR51 LTR ERV1 -160 511 2 216 319 35 52 chr5 146656092 146656208 -56429324 - L2 LINE L2 -998 2316 2203 348 48 0 0 chr5 146656861 146656903 -56428629 + tRNA-Cys-TGC tRNA tRNA 2 43 -32 379 274 51 59 chr5 146657497 146657624 -56427908 - L2 LINE L2 -44 3269 3142 2160 178 112 5 chr5 146657624 146658063 -56427469 - MER66B LTR ERV1 0 486 1 379 274 51 59 chr5 146658063 146658094 -56427438 - L2 LINE L2 -171 3142 3112 2255 122 0 0 chr5 146658094 146658406 -56427126 + AluSx SINE Alu 1 312 0 379 274 51 59 chr5 146658406 146658483 -56427049 - L2 LINE L2 -201 3112 3035 395 145 29 0 chr5 146658485 146658554 -56426978 + AluSg/x SINE Alu 218 288 -14 279 79 0 0 chr5 146658555 146658593 -56426939 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 294 184 0 7 chr5 146658601 146658659 -56426873 + FLAM SINE Alu 54 103 -30 244 305 76 23 chr5 146658661 146658792 -56426740 - L2 LINE L2 -264 3049 2912 535 164 267 14 chr5 146659071 146659217 -56426315 - MER53 DNA DNA -3 186 4 319 219 82 0 chr5 146659232 146659305 -56426227 - MER96B DNA MER1_type? -148 269 191 2471 49 0 0 chr5 146659495 146659781 -56425751 - AluY SINE Alu -20 291 6 2223 122 35 100 chr5 146659828 146660090 -56425442 - MSTA LTR MaLR 0 428 207 1662 146 20 4 chr5 146660090 146660344 -56425188 - AluJb SINE Alu -20 292 35 2223 122 35 100 chr5 146660344 146660539 -56424993 - MSTA LTR MaLR -221 207 1 2527 118 125 9 chr5 146660663 146661086 -56424446 - MER101 LTR ERV1 0 474 3 919 222 80 10 chr5 146662168 146662491 -56423041 + MLT1B LTR MaLR 19 390 0 393 195 0 0 chr5 146662691 146662768 -56422764 + MLT2C2 LTR ERVL 1 77 -387 242 278 161 28 chr5 146662919 146663099 -56422433 + HAL1 LINE L1 2285 2488 -19 247 281 167 57 chr5 146663368 146663578 -56421954 + MIR SINE MIR 15 247 -15 324 287 0 11 chr5 146663733 146663820 -56421712 + L1MC5 LINE L1 6752 6837 -1124 2346 74 0 3 chr5 146664078 146664392 -56421140 + AluY SINE Alu 1 313 0 198 0 0 0 chr5 146664392 146664414 -56421118 + (TTA)n Simple_repeat Simple_repeat 2 23 0 805 271 106 40 chr5 146664899 146665232 -56420300 + L1MCc LINE L1 1183 1493 -5448 2204 135 0 0 chr5 146665232 146665536 -56419996 + AluSx SINE Alu 1 304 -8 805 271 106 40 chr5 146665536 146666055 -56419477 + L1MCc LINE L1 1493 2229 -4712 257 256 170 37 chr5 146666078 146666324 -56419208 + L1ME3A LINE L1 989 1309 -4864 498 195 104 58 chr5 146666343 146666497 -56419035 + LTR50 LTR ERVL 1 161 -634 868 216 141 14 chr5 146666619 146666910 -56418622 + L1ME3A LINE L1 4919 5246 -883 1193 254 107 31 chr5 146666952 146667019 -56418513 + L1ME3A LINE L1 5351 5411 -742 1474 165 113 55 chr5 146667019 146667312 -56418220 - MLT1A1 LTR MaLR 0 365 48 2895 0 0 0 chr5 146667312 146667614 -56417918 + AluYa5 SINE Alu 1 302 -9 1474 165 113 55 chr5 146667614 146667665 -56417867 - MLT1A1 LTR MaLR -317 48 1 1193 254 107 31 chr5 146667665 146668137 -56417395 + L1ME3A LINE L1 5411 5931 -222 1188 218 149 35 chr5 146669955 146670419 -56415113 - HAL1 LINE L1 -13 2494 1978 265 363 93 0 chr5 146672425 146672607 -56412925 + L2 LINE L2 2866 3064 -208 2404 103 0 0 chr5 146672660 146672970 -56412562 + AluSx SINE Alu 1 310 -2 2427 96 0 0 chr5 146673407 146673719 -56411813 + AluSx SINE Alu 1 312 0 1585 145 94 19 chr5 146673731 146674049 -56411483 + L1MB3 LINE L1 5835 6176 -7 2040 135 10 13 chr5 146676000 146676304 -56409228 + AluJo SINE Alu 1 303 -9 713 188 8 0 chr5 146676650 146676767 -56408765 - FLAM_C SINE Alu -24 119 2 2806 159 42 4 chr5 146678952 146679429 -56406103 + LTR42 LTR ERVL 1 495 0 265 200 62 15 chr5 146679578 146679643 -56405889 + L2 LINE L2 3196 3263 -9 389 288 203 26 chr5 146681113 146681419 -56404113 - L2 LINE L2 -9 3263 2904 402 276 51 25 chr5 146681525 146681721 -56403811 - L2 LINE L2 -569 2745 2545 360 309 111 16 chr5 146682693 146683000 -56402532 + L1M4 LINE L1 3952 4287 -1859 197 266 47 0 chr5 146683099 146683163 -56402369 + MIR SINE MIR 196 262 0 295 281 26 26 chr5 146683318 146683432 -56402100 + L1M4 LINE L1 4487 4600 -1546 191 275 53 76 chr5 146683531 146683662 -56401870 + L2 LINE L2 3083 3210 -62 1416 180 107 0 chr5 146684119 146684391 -56401141 + AluJo SINE Alu 7 307 -5 364 160 32 40 chr5 146684430 146684555 -56400977 + G-rich Low_complexity Low_complexity 3 126 0 1898 111 59 17 chr5 146685587 146685876 -56399656 + AluSx SINE Alu 1 301 -11 397 315 51 30 chr5 146687784 146687981 -56397551 + MIR SINE MIR 2 202 -60 526 324 80 15 chr5 146688509 146688845 -56396687 - L2 LINE L2 -830 2484 2127 427 361 83 6 chr5 146689127 146689487 -56396045 - L2 LINE L2 -1189 2125 1738 1105 164 0 11 chr5 146691774 146691951 -56393581 + FAM SINE Alu 1 175 0 2336 92 3 16 chr5 146691964 146692269 -56393263 + AluSc SINE Alu 4 304 -5 368 279 29 0 chr5 146692410 146692514 -56393018 + L1ME4a LINE L1 5593 5699 -422 377 242 22 0 chr5 146695404 146695495 -56390037 - L2 LINE L2 -3 3269 3177 243 292 15 0 chr5 146697414 146697479 -56388053 + L2 LINE L2 3228 3293 -20 416 284 134 25 chr5 146697517 146697718 -56387814 + L1ME4a LINE L1 5750 5972 -149 2201 116 10 0 chr5 146699345 146699637 -56385895 - AluSx SINE Alu -11 301 7 223 294 42 108 chr5 146699732 146699946 -56385586 - MIR SINE MIR -14 248 49 590 293 45 25 chr5 146700265 146700463 -56385069 + MIR SINE MIR 2 203 -59 189 0 0 0 chr5 146701132 146701153 -56384379 + (A)n Simple_repeat Simple_repeat 1 21 0 1427 73 0 6 chr5 146702554 146702731 -56382801 - AluSg/x SINE Alu -13 299 124 860 321 190 32 chr5 146705142 146706418 -56379114 + L2 LINE L2 1565 3059 -213 2205 98 13 23 chr5 146706444 146706588 -56378944 + AluSq SINE Alu 1 145 -168 1940 78 0 0 chr5 146706588 146706818 -56378714 + AluY SINE Alu 1 230 -81 2205 98 13 23 chr5 146706818 146706978 -56378554 + AluSq SINE Alu 145 302 -11 1115 231 68 19 chr5 146707530 146707854 -56377678 - MLT1C LTR MaLR -2 465 126 367 217 23 85 chr5 146707957 146708086 -56377446 - MLT1C LTR MaLR -384 121 1 2721 152 29 12 chr5 146708231 146708718 -56376814 + LTR42 LTR ERVL 1 495 0 248 348 150 11 chr5 146708865 146709239 -56376293 + L2 LINE L2 2543 2979 -334 267 224 17 0 chr5 146709379 146709437 -56376095 + L2 LINE L2 3175 3233 -39 1377 169 19 67 chr5 146711336 146711649 -56373883 + MLT1B LTR MaLR 93 390 0 181 381 113 0 chr5 146711715 146712006 -56373526 - L2 LINE L2 -441 2873 2550 994 114 34 168 chr5 146712405 146712667 -56372865 - AluJb SINE Alu 0 312 86 500 314 24 30 chr5 146712800 146712945 -56372587 + MER91B DNA MER1_type 19 164 -26 2259 112 0 20 chr5 146712945 146713249 -56372283 + AluSg SINE Alu 1 298 -12 500 314 24 30 chr5 146713249 146713272 -56372260 + MER91B DNA MER1_type 164 186 -4 252 100 0 0 chr5 146713840 146713880 -56371652 + (CA)n Simple_repeat Simple_repeat 1 40 0 657 286 6 12 chr5 146715113 146715284 -56370248 + LTR33 LTR ERVL 8 177 -344 288 322 68 27 chr5 146715471 146715579 -56369953 - L2 LINE L2 0 3313 3196 221 0 35 0 chr5 146715579 146715608 -56369924 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 288 322 68 27 chr5 146715608 146715645 -56369887 - L2 LINE L2 -117 3196 3162 1612 170 37 82 chr5 146716204 146716609 -56368923 + MLT1B LTR MaLR 4 390 0 2738 267 52 1 chr5 146716910 146718033 -56367499 - L1ME3 LINE L1 -7 6155 4981 1008 223 119 43 chr5 146718040 146718385 -56367147 + LTR9 LTR ERV1 242 612 0 1013 234 7 38 chr5 146718385 146718575 -56366957 + L1 LINE L1 3317 3496 -2650 2367 94 3 10 chr5 146718575 146718883 -56366649 + AluSx SINE Alu 1 306 -6 1013 234 7 38 chr5 146718883 146718983 -56366549 + L1 LINE L1 3496 3598 -2548 * 3856 125 21 8 chr5 146718956 146720049 -56365483 - L1PBa LINE L1 -4950 1913 634 1200 147 5 0 chr5 146720049 146720246 -56365286 - L1PBa LINE L1 -6663 200 3 343 365 53 48 chr5 146720255 146720611 -56364921 - L1MEc LINE L1 -5360 901 544 1827 158 3 24 chr5 146720854 146721146 -56364386 + AluJo SINE Alu 5 290 -22 668 299 39 27 chr5 146721179 146721510 -56364022 - L1MEc LINE L1 -5696 374 40 1512 296 75 58 chr5 146721763 146721936 -56363596 + L1MEc LINE L1 80 248 -6148 1986 167 3 0 chr5 146721936 146722241 -56363291 + AluJo SINE Alu 3 308 -4 1512 296 75 58 chr5 146722241 146722436 -56363096 + L1MEc LINE L1 248 438 -5958 230 73 24 0 chr5 146722436 146722477 -56363055 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 1512 296 75 58 chr5 146722477 146723632 -56361900 + L1MEc LINE L1 438 1631 -4765 2192 130 0 0 chr5 146723641 146723942 -56361590 + AluSx SINE Alu 1 301 -11 1888 151 0 3 chr5 146724042 146724334 -56361198 + AluSx SINE Alu 22 312 0 675 234 29 115 chr5 146724360 146724445 -56361087 + L1MEc LINE L1 1639 1730 -4666 2167 121 3 16 chr5 146724445 146724759 -56360773 - AluSx SINE Alu -2 310 1 675 234 29 115 chr5 146724759 146725057 -56360475 + L1MEc LINE L1 1730 1989 -4407 1905 157 78 11 chr5 146725325 146725695 -56359837 - MSTD LTR MaLR -1 395 1 25 31 0 0 chr5 146725700 146725732 -56359800 + AT_rich Low_complexity Low_complexity 1 32 0 538 284 95 74 chr5 146725968 146727021 -56358511 - L1M4 LINE L1 -1328 4818 3744 912 111 0 0 chr5 146728419 146728536 -56356996 + FLAM_C SINE Alu 1 117 -26 249 33 0 0 chr5 146728553 146728583 -56356949 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 310 155 17 0 chr5 146728604 146728662 -56356870 + L2 LINE L2 3254 3312 -1 230 229 0 0 chr5 146730254 146730302 -56355230 + L2 LINE L2 3225 3272 0 382 289 10 0 chr5 146731473 146731570 -56353962 - L2 LINE L2 -12 3301 3204 183 119 34 51 chr5 146734057 146734116 -56351416 + G-rich Low_complexity Low_complexity 2 59 0 237 33 0 0 chr5 146734126 146734156 -56351376 + (CGG)n Simple_repeat Simple_repeat 2 31 0 279 0 0 0 chr5 146735606 146735637 -56349895 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 147 0 0 chr5 146735843 146735877 -56349655 + (CAG)n Simple_repeat Simple_repeat 1 34 0 344 270 102 46 chr5 146736404 146736600 -56348932 - MIR SINE MIR -16 246 40 506 295 123 11 chr5 146736719 146737092 -56348440 + L2 LINE L2 2610 3012 -301 314 277 233 31 chr5 146737107 146737266 -56348266 + MIR SINE MIR 17 207 -55 335 352 0 8 chr5 146737497 146737625 -56347907 + MIR SINE MIR 117 243 -19 283 348 94 13 chr5 146738406 146738639 -56346893 - L2 LINE L2 -212 3060 2809 426 302 44 19 chr5 146739570 146739729 -56345803 - MIR SINE MIR -46 216 54 264 59 0 0 chr5 146740689 146740723 -56344809 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 206 306 128 37 chr5 146743984 146744226 -56341306 - L2 LINE L2 -174 3098 2835 327 299 111 7 chr5 146745435 146745579 -56339953 - MIR SINE MIR -12 250 92 298 266 46 9 chr5 146748859 146748968 -56336564 - L2 LINE L2 -27 3245 3133 404 263 52 84 chr5 146749787 146749994 -56335538 - L1ME LINE L1 -554 5567 5372 196 370 0 48 chr5 146751977 146752142 -56333390 + L2 LINE L2 2956 3112 -160 213 216 0 0 chr5 146752262 146752313 -56333219 + (CA)n Simple_repeat Simple_repeat 1 51 0 3175 125 27 79 chr5 146752394 146752952 -56332580 + MER1A DNA MER1_type 1 529 0 2139 118 0 3 chr5 146753029 146753318 -56332214 + AluSx SINE Alu 7 294 -18 429 275 197 22 chr5 146753318 146753703 -56331829 - L2 LINE L2 -18 3295 2791 731 189 126 0 chr5 146753704 146753863 -56331669 - LTR47A LTR ERVL 0 452 274 1910 141 7 30 chr5 146754092 146754397 -56331135 + AluJo SINE Alu 1 298 -14 617 184 145 13 chr5 146754434 146754586 -56330946 - L2 LINE L2 -520 2794 2623 333 336 53 30 chr5 146754588 146754853 -56330679 + L2 LINE L2 2542 2812 -502 270 160 0 0 chr5 146755815 146755865 -56329667 + (CA)n Simple_repeat Simple_repeat 2 51 0 448 218 106 45 chr5 146755993 146756172 -56329360 - MIR SINE MIR -1 261 72 196 139 0 0 chr5 146757159 146757195 -56328337 + L2 LINE L2 2225 2260 -1054 1066 36 7 7 chr5 146757283 146757423 -56328109 + (TTC)n Simple_repeat Simple_repeat 2 141 0 2730 141 0 0 chr5 146757714 146758125 -56327407 - LTR57 LTR ERVL 0 411 1 34323 122 34 10 chr5 146758125 146759512 -56326020 - LTR57-int LTR ERVL 0 5343 3991 1647 93 136 47 chr5 146759512 146759770 -56325762 + AluSx SINE Alu 3 283 -29 34323 122 34 10 chr5 146759770 146761993 -56323539 - LTR57-int LTR ERVL -1352 3991 1566 2366 78 0 0 chr5 146761993 146762276 -56323256 - AluSc SINE Alu -26 283 1 34323 122 34 10 chr5 146762276 146763881 -56321651 - LTR57-int LTR ERVL -3777 1566 1 2532 133 35 0 chr5 146763881 146764278 -56321254 - LTR57 LTR ERVL 0 411 1 2472 85 0 0 chr5 146764670 146764965 -56320567 - AluSg1 SINE Alu -14 295 1 474 267 7 27 chr5 146764968 146765114 -56320418 + LTR16C LTR ERVL 349 491 0 595 319 56 61 chr5 146765139 146765547 -56319985 + HERV16 LTR ERVL 465 870 -4126 967 329 31 22 chr5 146765593 146766003 -56319529 + HERV16 LTR ERVL 968 1373 -4391 2485 77 0 0 chr5 146766003 146766303 -56319229 + AluY SINE Alu 1 300 -11 967 329 31 22 chr5 146766303 146767363 -56318169 + HERV16 LTR ERVL 1373 2880 -2884 267 214 0 0 chr5 146767463 146767533 -56317999 - L1MC5 LINE L1 -129 7832 7763 1077 336 51 52 chr5 146767536 146768044 -56317488 + HERV16 LTR ERVL 2859 3366 -2398 1817 130 60 33 chr5 146768044 146768344 -56317188 + AluJb SINE Alu 1 308 -4 1077 336 51 52 chr5 146768344 146768799 -56316733 + HERV16 LTR ERVL 3366 3900 -1864 1282 181 4 16 chr5 146768957 146769205 -56316327 + MER96B DNA MER1_type? 3 247 -170 471 267 25 0 chr5 146769404 146769524 -56316008 + MER94 DNA DNA 6 128 -6 236 279 198 0 chr5 146772525 146772611 -56312921 + MIR SINE MIR 15 117 -145 2347 113 0 0 chr5 146773510 146773820 -56311712 + AluSx SINE Alu 1 310 -2 332 329 36 14 chr5 146773903 146774043 -56311489 + MIR3 SINE MIR 5 147 -61 3856 148 45 57 chr5 146774051 146774171 -56311361 + L1MB2 LINE L1 5383 5503 -668 1615 155 4 16 chr5 146774171 146774429 -56311103 + AluJo SINE Alu 35 289 -23 3856 148 45 57 chr5 146774429 146775099 -56310433 + L1MB2 LINE L1 5503 6164 -7 265 203 0 16 chr5 146775102 146775166 -56310366 + MIR SINE MIR 137 199 -63 2180 72 10 34 chr5 146775864 146776069 -56309463 - AluSq SINE Alu 0 325 128 212 0 36 0 chr5 146776069 146776097 -56309435 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2180 72 10 34 chr5 146776097 146776222 -56309310 - AluSq SINE Alu -197 128 2 3597 216 37 7 chr5 146776236 146777123 -56308409 - L1MC4a LINE L1 -2 7806 6893 698 158 50 64 chr5 146779483 146779685 -56305847 + L1M4 LINE L1 5197 5395 -751 5035 223 121 46 chr5 146779688 146780809 -56304723 + L1MB7 LINE L1 11 1047 -5912 2188 135 0 0 chr5 146780809 146781105 -56304427 + AluSx SINE Alu 6 301 -11 5035 223 121 46 chr5 146781105 146781433 -56304099 + L1MB7 LINE L1 1047 1349 -5610 736 204 0 0 chr5 146781433 146781565 -56303967 + FLAM_A SINE Alu 1 132 -1 5035 223 121 46 chr5 146781565 146782281 -56303251 + L1MB7 LINE L1 1349 2330 -4629 652 219 15 50 chr5 146782249 146782450 -56303082 + L1MB7 LINE L1 5209 5402 -1555 * 4087 154 17 28 chr5 146782424 146782854 -56302678 + L1MB7 LINE L1 6176 6609 -386 603 0 0 0 chr5 146782854 146782921 -56302611 + (TA)n Simple_repeat Simple_repeat 1 67 0 2198 107 4 0 chr5 146782921 146783223 -56302309 - AluSx SINE Alu 0 303 1 4087 154 17 28 chr5 146783223 146783610 -56301922 + L1MB7 LINE L1 6607 6986 -9 422 256 134 6 chr5 146784066 146784238 -56301294 - MIR SINE MIR -6 256 63 268 211 70 0 chr5 146784491 146784548 -56300984 - L2 LINE L2 -4 3309 3249 299 255 186 0 chr5 146784740 146784842 -56300690 + L2 LINE L2 3150 3270 -2 306 0 0 0 chr5 146784850 146784884 -56300648 + (T)n Simple_repeat Simple_repeat 1 34 0 375 283 87 7 chr5 146784884 146785022 -56300510 + MIR SINE MIR 66 214 -48 189 107 0 0 chr5 146785405 146785433 -56300099 + (TATG)n Simple_repeat Simple_repeat 3 30 0 821 170 113 6 chr5 146786104 146786263 -56299269 + MER45A DNA AcHobo 1 176 -2 204 285 66 66 chr5 146786625 146786762 -56298770 + MIR SINE MIR 8 144 -118 216 233 33 0 chr5 146788389 146788449 -56297083 - MIR SINE MIR -61 147 86 651 230 106 6 chr5 146789534 146789695 -56295837 + MER5B DNA MER1_type 1 177 -1 1073 202 5 0 chr5 146793329 146793527 -56292005 - MLT1B LTR MaLR 0 390 192 274 218 0 0 chr5 146793629 146793684 -56291848 - MLT1B LTR MaLR -319 55 1 2653 158 124 16 chr5 146793685 146793819 -56291713 - L1MB7 LINE L1 -30 6154 6021 871 278 154 17 chr5 146793819 146794294 -56291238 - L1MD1 LINE L1 -226 6016 5477 250 277 85 32 chr5 146794751 146794845 -56290687 - MIR SINE MIR 0 262 164 1953 122 4 0 chr5 146795538 146795809 -56289723 + AluSq SINE Alu 42 313 0 282 319 28 52 chr5 146795958 146796061 -56289471 + MIR SINE MIR 51 148 -114 2242 111 7 0 chr5 146796061 146796368 -56289164 - AluSq SINE Alu -4 309 1 282 319 28 52 chr5 146796368 146796477 -56289055 + MIR SINE MIR 148 258 -4 2042 147 0 0 chr5 146798103 146798408 -56287124 + AluSx SINE Alu 1 305 0 25 0 0 0 chr5 146798408 146798433 -56287099 + AT_rich Low_complexity Low_complexity 1 25 0 1769 170 14 7 chr5 146800388 146800677 -56284855 + AluJo SINE Alu 1 291 -21 830 165 176 0 chr5 146801728 146801904 -56283628 - MER3 DNA MER1_type 0 209 3 2197 139 33 14 chr5 146802151 146802237 -56283295 - MER47A DNA MER2_type -1957 366 283 2622 159 36 6 chr5 146802237 146802708 -56282824 + MER66B LTR ERV1 1 485 -1 2197 139 33 14 chr5 146802708 146802980 -56282552 - MER47A DNA MER2_type -2040 283 1 31 0 0 0 chr5 146803722 146803753 -56281779 + AT_rich Low_complexity Low_complexity 1 31 0 321 274 0 36 chr5 146803952 146804036 -56281496 - L2 LINE L2 -16 3297 3217 293 234 128 11 chr5 146804027 146804121 -56281411 + MIR SINE MIR 152 256 -6 * 252 0 0 0 chr5 146805055 146805083 -56280449 + (CAA)n Simple_repeat Simple_repeat 2 29 0 276 30 0 0 chr5 146805316 146805349 -56280183 + (CA)n Simple_repeat Simple_repeat 2 34 0 242 151 0 19 chr5 146805368 146805421 -56280111 - LTR66 LTR ERVL -171 439 388 1653 163 11 35 chr5 146805434 146805717 -56279815 - AluJb SINE Alu -36 276 1 452 200 88 40 chr5 146805959 146806084 -56279448 - MIR SINE MIR -122 140 10 215 397 16 0 chr5 146806289 146806410 -56279122 - MER5A DNA MER1_type -4 185 63 2469 92 0 0 chr5 146806921 146807226 -56278306 + AluSq SINE Alu 1 305 -8 426 248 121 0 chr5 146807326 146807483 -56278049 - MIR SINE MIR 0 262 87 1998 118 0 7 chr5 146807552 146807831 -56277701 + AluSx SINE Alu 25 301 -11 2237 117 0 0 chr5 146808511 146808802 -56276730 + AluSx SINE Alu 3 293 -19 333 0 0 0 chr5 146809208 146809245 -56276287 + (CA)n Simple_repeat Simple_repeat 1 37 0 2889 143 121 14 chr5 146809695 146810247 -56275285 - LTR36 LTR ERV1 0 611 1 2320 109 0 10 chr5 146810273 146810586 -56274946 - AluSx SINE Alu -2 310 1 1294 148 10 0 chr5 146810910 146811112 -56274420 + MER3 DNA MER1_type 2 205 -4 2302 119 0 0 chr5 146812722 146813032 -56272500 + AluSq SINE Alu 4 313 0 895 278 25 48 chr5 146813436 146813747 -56271785 - L1P4 LINE L1 -372 5789 5487 1823 124 42 42 chr5 146813747 146814054 -56271478 - AluJb SINE Alu -5 307 1 895 278 25 48 chr5 146814054 146814216 -56271316 - L1P4 LINE L1 -674 5487 5323 2202 112 0 30 chr5 146814217 146814522 -56271010 - AluSx SINE Alu -16 296 1 7802 89 9 21 chr5 146814548 146815632 -56269900 - MER11C LTR ERVK 0 1071 1 306 279 63 0 chr5 146815636 146815747 -56269785 - L1M4 LINE L1 -838 5308 5191 282 56 0 0 chr5 146815945 146815981 -56269551 + (CA)n Simple_repeat Simple_repeat 2 37 0 234 0 0 0 chr5 146816541 146816567 -56268965 + (T)n Simple_repeat Simple_repeat 1 26 0 2332 97 3 3 chr5 146817311 146817610 -56267922 + AluSq SINE Alu 1 299 -14 2279 91 0 3 chr5 146817615 146817900 -56267632 + AluSc SINE Alu 1 284 -25 348 283 91 50 chr5 146817930 146818143 -56267389 + L1M4 LINE L1 4749 4952 -1199 2190 110 3 0 chr5 146818143 146818435 -56267097 + AluSx SINE Alu 1 293 -19 348 283 91 50 chr5 146818435 146818870 -56266662 + L1M4 LINE L1 4952 5425 -726 2327 228 120 44 chr5 146818908 146819640 -56265892 - MER21B LTR ERV1 -75 788 1 273 276 211 43 chr5 146819657 146819842 -56265690 + MIR SINE MIR 12 227 -35 205 156 0 0 chr5 146820684 146820716 -56264816 + (TG)n Simple_repeat Simple_repeat 1 32 0 1983 233 144 70 chr5 146820835 146821633 -56263899 - MER21B LTR ERV1 -1 862 6 28577 94 11 9 chr5 146822034 146822392 -56263140 - L1P LINE L1 -2093 4053 3697 2858 13 0 3 chr5 146822392 146822703 -56262829 - AluYb8 SINE Alu -8 310 1 28577 94 11 9 chr5 146822703 146826380 -56259152 - L1P LINE L1 -2449 3697 11 285 51 0 0 chr5 146826556 146826595 -56258937 + (CA)n Simple_repeat Simple_repeat 2 40 0 448 296 82 24 chr5 146827099 146827305 -56258227 + MIR SINE MIR 11 228 -34 1269 257 176 2 chr5 146827312 146827795 -56257737 + L2 LINE L2 964 1530 -1784 1736 131 45 0 chr5 146827797 146828041 -56257491 - AluSx SINE Alu -57 255 1 308 264 379 18 chr5 146828092 146828369 -56257163 - L2 LINE L2 -580 2734 2358 1681 212 154 150 chr5 146828375 146828777 -56256755 + L2 LINE L2 1594 1993 -1321 1025 184 0 0 chr5 146828777 146828940 -56256592 + AluSg/x SINE Alu 135 297 -13 1681 212 154 150 chr5 146828940 146829578 -56255954 + L2 LINE L2 1993 2801 -513 2271 87 0 39 chr5 146829645 146829955 -56255577 - AluSc SINE Alu -11 298 1 2616 121 140 40 chr5 146830036 146830506 -56255026 + LTR44 LTR ERV1 3 519 0 1096 247 88 57 chr5 146830517 146830986 -56254546 + L2 LINE L2 2793 3269 -44 9306 161 9 7 chr5 146830986 146832486 -56253046 + MSTB-int LTR MaLR 150 1651 0 2325 167 65 5 chr5 146832486 146832888 -56252644 + MSTB LTR MaLR 1 426 0 243 88 0 0 chr5 146832900 146832934 -56252598 + (A)n Simple_repeat Simple_repeat 1 34 0 974 169 17 6 chr5 146832943 146833121 -56252411 + FRAM SINE Alu 1 172 -4 180 111 0 0 chr5 146833144 146833171 -56252361 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 676 171 0 71 chr5 146833196 146833336 -56252196 + FLAM_C SINE Alu 2 131 -2 409 232 77 71 chr5 146833383 146833414 -56252118 + L1ME4a LINE L1 5961 5990 -131 1908 113 57 11 chr5 146833414 146833697 -56251835 + AluSq SINE Alu 1 296 -17 2241 122 3 0 chr5 146833697 146834001 -56251531 + AluSx SINE Alu 1 305 -7 409 232 77 71 chr5 146834001 146834123 -56251409 + L1ME4a LINE L1 5989 6116 -5 2242 113 0 7 chr5 146834217 146834519 -56251013 + AluSx SINE Alu 1 300 -12 284 338 21 79 chr5 146834994 146835284 -56250248 + L2 LINE L2 262 534 -2780 1625 135 35 47 chr5 146836312 146836631 -56248901 - MER44D DNA MER2_type -21 588 4 * 1650 171 9 50 chr5 146836631 146836949 -56248583 - MLT2B2 LTR ERVL -11 504 200 2380 82 0 0 chr5 146836958 146837252 -56248280 - AluY SINE Alu -17 294 1 585 179 9 9 chr5 146837260 146837366 -56248166 - FLAM_A SINE Alu -19 123 18 900 119 6 90 chr5 146837367 146837544 -56247988 - MLT2B2 LTR ERVL -305 210 49 372 275 108 8 chr5 146837568 146837715 -56247817 + MIR SINE MIR 45 204 -58 786 238 28 0 chr5 146837949 146838130 -56247402 + L2 LINE L2 2177 2362 -952 5503 115 34 46 chr5 146838130 146839212 -56246320 + L1MB3 LINE L1 5110 6181 -2 1294 293 48 51 chr5 146839301 146839606 -56245926 + L2 LINE L2 2432 2737 -576 1581 156 93 0 chr5 146839606 146839876 -56245656 + AluJb SINE Alu 1 295 -17 1294 293 48 51 chr5 146839876 146840449 -56245083 + L2 LINE L2 2737 3312 -1 2632 131 21 58 chr5 146841211 146841388 -56244144 - LTR32 LTR ERVL -1 470 288 2258 101 7 7 chr5 146841388 146841695 -56243837 + AluSq SINE Alu 1 307 -6 2632 131 21 58 chr5 146841695 146841982 -56243550 - LTR32 LTR ERVL -183 288 23 2248 121 10 0 chr5 146842129 146842435 -56243097 - AluSx SINE Alu -3 309 1 199 307 22 80 chr5 146842653 146842790 -56242742 - MIR SINE MIR -133 129 1 1464 232 139 44 chr5 146842927 146843422 -56242110 - MLT1F1 LTR MaLR 0 567 1 1735 167 0 7 chr5 146843615 146843909 -56241623 + AluJb SINE Alu 1 292 -20 909 108 39 248 chr5 146844685 146844747 -56240785 + MER33 DNA MER1_type 3 76 -2509 1669 161 3 36 chr5 146844747 146845074 -56240458 + AluJo SINE Alu 1 312 0 909 108 39 248 chr5 146845074 146845348 -56240184 + MER33 DNA MER1_type 76 242 -2343 538 132 271 0 chr5 146845348 146845492 -56240040 - MER53 DNA DNA -3 186 4 909 108 39 248 chr5 146845492 146845561 -56239971 + MER33 DNA MER1_type 242 324 0 216 242 0 16 chr5 146846146 146846208 -56239324 + (CCCCG)n Simple_repeat Simple_repeat 2 62 0 1663 82 50 104 chr5 146847429 146847747 -56237785 - AluSc SINE Alu -8 301 1 182 329 0 29 chr5 146849551 146849621 -56235911 + L2 LINE L2 3205 3272 0 38 0 0 20 chr5 146849822 146849844 -56235688 + AT_rich Low_complexity Low_complexity 1 22 -26 2048 115 3 0 chr5 146849844 146850132 -56235400 + AluSx SINE Alu 1 289 -23 38 0 0 20 chr5 146850132 146850158 -56235374 + AT_rich Low_complexity Low_complexity 22 48 0 2077 103 6 16 chr5 146850426 146850737 -56234795 + AluSg SINE Alu 1 308 -2 2051 113 7 0 chr5 146851261 146851554 -56233978 + AluSx SINE Alu 1 295 -17 409 182 100 36 chr5 146852112 146852222 -56233310 - L1MA10 LINE L1 -5 6329 6213 376 262 71 24 chr5 146854145 146854271 -56231261 - MIR SINE MIR -55 153 22 518 184 0 0 chr5 146855871 146855958 -56229574 - AluJ/FLAM SINE Alu -224 88 2 2212 107 3 0 chr5 146855964 146856272 -56229260 - AluSp SINE Alu -4 309 1 707 181 17 0 chr5 146856307 146856423 -56229109 - MIR SINE MIR -110 152 35 1297 303 116 28 chr5 146856539 146857440 -56228092 - L2 LINE L2 -160 3112 2148 686 192 17 0 chr5 146858513 146858633 -56226899 - MER20 DNA MER1_type -1 218 97 195 300 191 18 chr5 146859263 146859373 -56226159 + L2 LINE L2 3180 3308 -5 338 278 54 63 chr5 146859494 146859699 -56225833 - L1ME3A LINE L1 -5 6165 5963 1282 222 94 68 chr5 146859790 146860394 -56225138 - L1MC5 LINE L1 -435 7526 6907 1800 142 19 13 chr5 146862706 146863015 -56222517 - AluSq SINE Alu -2 311 1 966 304 105 18 chr5 146867713 146868105 -56217427 - L2 LINE L2 -1 3312 2887 352 275 45 60 chr5 146872300 146872500 -56213032 - LTR16C LTR ERVL -9 482 286 34133 88 17 58 chr5 146874334 146879633 -56205899 + L1PA6 LINE L1 26 5001 -1153 2259 88 7 0 chr5 146879633 146879939 -56205593 + AluY SINE Alu 2 309 -2 34133 88 17 58 chr5 146879939 146881043 -56204489 + L1PA6 LINE L1 5001 6148 -6 2108 114 3 10 chr5 146881053 146881352 -56204180 + AluSx SINE Alu 1 297 -15 1495 229 82 34 chr5 146881352 146882134 -56203398 + L1MEc LINE L1 1709 2523 -3873 464 275 111 26 chr5 146882308 146882497 -56203035 + MIR SINE MIR 2 206 -56 2172 122 0 0 chr5 146883230 146883534 -56201998 + AluSq SINE Alu 1 304 -9 1140 274 11 7 chr5 146883960 146884245 -56201287 - LTR16B LTR ERVL 0 464 179 424 258 69 31 chr5 146884286 146884445 -56201087 + L2 LINE L2 3144 3308 -5 432 283 110 55 chr5 146885304 146885541 -56199991 + MIR SINE MIR 13 262 0 207 292 22 56 chr5 146886666 146886755 -56198777 - MIR SINE MIR -100 162 77 31 58 0 0 chr5 146887291 146887343 -56198189 + GC_rich Low_complexity Low_complexity 1 52 0 2314 84 3 0 chr5 146888762 146889071 -56196461 + AluSp SINE Alu 2 311 -2 606 194 91 18 chr5 146889087 146889252 -56196280 - MLT1J2 LTR MaLR -273 177 1 262 289 118 21 chr5 146889272 146889459 -56196073 - L1M4c LINE L1 -2346 4036 3832 236 279 91 31 chr5 146889590 146889909 -56195623 - L1M4c LINE L1 -2705 3677 3340 231 114 0 0 chr5 146890210 146890245 -56195287 + (CA)n Simple_repeat Simple_repeat 2 36 0 362 286 77 60 chr5 146890249 146890431 -56195101 - L1M4c LINE L1 -3959 2425 2303 1994 95 14 3 chr5 146890623 146890906 -56194626 - AluSc SINE Alu 0 309 24 237 270 27 27 chr5 146891238 146891312 -56194220 + MER84 LTR ERVI 167 240 -267 321 257 35 26 chr5 146891581 146891694 -56193838 + L1ME4a LINE L1 5543 5656 -465 1194 233 86 22 chr5 146891719 146892032 -56193500 - MER113 DNA MER1_type? -33 488 139 1811 153 0 4 chr5 146892032 146892337 -56193195 - AluSx SINE Alu 0 309 6 1194 233 86 22 chr5 146892337 146892439 -56193093 - MER113 DNA MER1_type? -382 139 45 262 254 17 0 chr5 146892472 146892531 -56193001 + L1ME4a LINE L1 5648 5707 -414 309 330 29 0 chr5 146892554 146892657 -56192875 + L1ME4a LINE L1 5712 5817 -1991 280 259 135 42 chr5 146892660 146892750 -56192782 + L1ME4a LINE L1 5836 5916 -205 315 0 0 0 chr5 146892750 146892785 -56192747 + (TG)n Simple_repeat Simple_repeat 1 35 0 280 259 135 42 chr5 146892785 146892887 -56192645 + L1ME4a LINE L1 5916 6046 -75 564 312 48 42 chr5 146893804 146893942 -56191590 + L2 LINE L2 2549 2685 -629 2067 156 134 16 chr5 146893942 146894390 -56191142 - MLT1D LTR MaLR 0 505 5 564 312 48 42 chr5 146894390 146894581 -56190951 + L2 LINE L2 2685 2880 -434 2776 126 26 17 chr5 146894616 146894965 -56190567 + MSTB LTR MaLR 1 356 -70 2375 108 0 0 chr5 146894965 146895270 -56190262 - AluSx SINE Alu -7 305 1 2776 126 26 17 chr5 146895270 146895342 -56190190 + MSTB LTR MaLR 356 426 0 243 291 76 70 chr5 146895426 146895584 -56189948 + L2 LINE L2 3120 3278 -35 637 261 0 26 chr5 146895703 146895856 -56189676 + L2 LINE L2 3162 3310 -3 248 241 0 0 chr5 146895996 146896054 -56189478 + MIR SINE MIR 171 228 -34 2552 67 0 0 chr5 146898348 146898648 -56186884 + AluY SINE Alu 1 300 -11 2201 136 0 0 chr5 146898727 146899036 -56186496 - AluSx SINE Alu -3 309 1 481 198 10 10 chr5 146899036 146899132 -56186400 - MER2 DNA MER2_type -249 96 1 830 263 187 13 chr5 146899799 146900262 -56185270 - L2 LINE L2 -8 3305 2766 529 262 48 6 chr5 146900266 146900434 -56185098 + LTR67 LTR ERVL 383 557 0 657 279 93 4 chr5 146900956 146901193 -56184339 + MIR SINE MIR 4 261 -1 229 237 113 72 chr5 146901232 146901329 -56184203 - MIR SINE MIR -88 120 20 504 265 73 77 chr5 146901983 146902217 -56183315 + MIR SINE MIR 3 235 -27 206 300 86 57 chr5 146902579 146902719 -56182813 - MIR SINE MIR -112 150 7 213 171 24 0 chr5 146903362 146903403 -56182129 - L2 LINE L2 -2 3270 3229 890 268 84 7 chr5 146904822 146905109 -56180423 - L2 LINE L2 0 3313 3005 549 323 65 48 chr5 146905280 146905617 -56179915 - L2 LINE L2 -5 3267 2925 200 176 29 118 chr5 146906439 146906507 -56179025 - MIR SINE MIR 0 262 201 1211 222 61 63 chr5 146906523 146906964 -56178568 + LTR33 LTR ERVL 11 450 -71 586 289 18 18 chr5 146907007 146907173 -56178359 - MIR SINE MIR -95 167 2 1366 286 48 32 chr5 146908101 146908604 -56176928 + MLT1J LTR MaLR 1 511 0 1904 172 16 3 chr5 146908643 146908946 -56176586 - AluJo SINE Alu -5 307 1 1865 161 3 3 chr5 146909024 146909323 -56176209 - AluSx SINE Alu -2 310 12 356 243 158 48 chr5 146909335 146909607 -56175925 - L1M4 LINE L1 -868 5278 4977 441 265 58 105 chr5 146910018 146910284 -56175248 - L1ME4a LINE L1 0 6121 5844 2530 82 0 0 chr5 146910284 146910587 -56174945 - AluSx SINE Alu -9 303 1 441 265 58 105 chr5 146910587 146910920 -56174612 - L1ME4a LINE L1 -277 5844 5550 253 283 66 72 chr5 146910923 146911089 -56174443 + L2 LINE L2 2616 2780 -534 1066 296 41 39 chr5 146911108 146911567 -56173965 - LTR16B LTR ERVL -4 460 1 318 315 78 56 chr5 146911577 146911847 -56173685 + L2 LINE L2 2825 3100 -172 180 212 0 0 chr5 146912021 146912054 -56173478 + L2 LINE L2 3271 3303 -10 23 92 0 0 chr5 146912884 146912949 -56172583 + AT_rich Low_complexity Low_complexity 1 65 0 267 179 36 0 chr5 146912970 146913026 -56172506 + L1MA5A LINE L1 6227 6284 -13 1009 127 0 0 chr5 146913055 146913205 -56172327 - L1MA5A LINE L1 -19 6278 6129 2148 131 0 7 chr5 146914791 146915088 -56170444 + AluSq SINE Alu 1 295 -18 2154 215 76 58 chr5 146916673 146916778 -56168754 + L1ME3 LINE L1 5084 5186 -976 2266 105 7 0 chr5 146916778 146917074 -56168458 + AluSg SINE Alu 3 300 -10 2154 215 76 58 chr5 146917074 146917783 -56167749 + L1ME3 LINE L1 5186 5954 -208 1982 167 3 0 chr5 146917783 146918089 -56167443 + AluJo SINE Alu 1 307 -5 2154 215 76 58 chr5 146918089 146918191 -56167341 + L1ME3 LINE L1 5954 6053 -109 285 250 0 60 chr5 146918266 146918350 -56167182 + L2 LINE L2 3192 3270 -2 1986 151 10 0 chr5 146918360 146918659 -56166873 + AluSx SINE Alu 3 304 -8 730 155 219 7 chr5 146918993 146919148 -56166384 - MER5A DNA MER1_type 0 189 2 195 42 0 0 chr5 146919677 146919701 -56165831 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2151 141 3 0 chr5 146919844 146920149 -56165383 + AluSx SINE Alu 2 307 -5 3192 106 52 43 chr5 146921037 146921627 -56163905 - MER4B LTR ERV1 -14 765 1 535 310 39 0 chr5 146921627 146921782 -56163750 + MIR SINE MIR 22 182 -80 349 209 99 22 chr5 146922017 146922108 -56163424 - MIR SINE MIR -57 205 108 250 207 88 4 chr5 146922200 146922283 -56163249 - MIR SINE MIR -97 111 23 415 252 52 49 chr5 146922901 146923207 -56162325 + L1ME4a LINE L1 5720 6026 -95 383 278 90 47 chr5 146923457 146923691 -56161841 + L2 LINE L2 3008 3251 -62 2591 256 75 66 chr5 146924038 146924331 -56161201 + L2 LINE L2 1805 2094 -1219 2518 90 0 0 chr5 146924331 146924642 -56160890 - AluSx SINE Alu -1 311 1 2591 256 75 66 chr5 146924642 146925838 -56159694 + L2 LINE L2 2094 3313 0 2451 82 0 0 chr5 146926589 146926882 -56158650 - AluSc SINE Alu -16 293 1 449 291 49 9 chr5 146927052 146927285 -56158247 + L1MC4a LINE L1 5596 5805 -316 463 319 70 11 chr5 146927347 146927563 -56157969 + MIR SINE MIR 18 246 -16 1117 134 0 0 chr5 146928618 146928797 -56156735 + L1MA6 LINE L1 6122 6300 0 525 241 259 9 chr5 146928800 146929116 -56156416 - HAL1 LINE L1 -13 2494 2100 478 245 122 34 chr5 146929118 146929502 -56156030 - HAL1 LINE L1 -1187 1320 903 210 71 0 0 chr5 146929536 146929564 -56155968 + (TTG)n Simple_repeat Simple_repeat 3 30 0 362 98 0 16 chr5 146929568 146929629 -56155903 + (TTC)n Simple_repeat Simple_repeat 2 61 0 398 298 81 62 chr5 146929636 146929876 -56155656 - HAL1 LINE L1 -1572 935 701 1310 165 14 5 chr5 146929876 146930088 -56155444 - MER20 DNA MER1_type -3 216 3 398 298 81 62 chr5 146930088 146930134 -56155398 - HAL1 LINE L1 -1806 701 657 1609 220 174 20 chr5 146930134 146930644 -56154888 - MLT1G LTR MaLR -1 589 1 398 298 81 62 chr5 146930644 146930775 -56154757 - HAL1 LINE L1 -1850 657 509 462 270 39 126 chr5 146930856 146931141 -56154391 - HAL1 LINE L1 -2154 353 94 2136 132 0 0 chr5 146931156 146931444 -56154088 - AluSx SINE Alu -24 288 1 1940 151 25 0 chr5 146931452 146931736 -56153796 - AluJo SINE Alu -21 291 1 1196 258 93 19 chr5 146932234 146932696 -56152836 + LTR33 LTR ERVL 26 521 0 186 195 49 0 chr5 146933343 146933384 -56152148 - MIR SINE MIR -112 150 108 459 226 38 38 chr5 146934490 146934596 -56150936 - MER5B DNA MER1_type 0 178 73 2555 222 93 35 chr5 146934606 146935402 -56150130 - L1ME3A LINE L1 0 6170 5329 375 182 0 15 chr5 146935402 146935468 -56150064 - MER5B DNA MER1_type -113 65 1 280 219 1 79 chr5 146936873 146936972 -56148560 - L1ME LINE L1 -614 5550 5458 187 299 130 48 chr5 146936991 146937222 -56148310 + L2 LINE L2 1545 1794 -1520 421 254 112 22 chr5 146937243 146937377 -56148155 - L2 LINE L2 0 3313 3168 602 65 33 11 chr5 146937809 146937901 -56147631 + L1MB2 LINE L1 6071 6164 -7 4373 145 19 22 chr5 146938020 146938793 -56146739 + L1MB4 LINE L1 5410 6180 0 306 289 30 7 chr5 146938793 146938928 -56146604 - L1ME4a LINE L1 -20 6101 5964 198 0 0 0 chr5 146938939 146938961 -56146571 + (TG)n Simple_repeat Simple_repeat 2 23 0 261 306 29 28 chr5 146939008 146939197 -56146335 - L3 LINE CR1 -259 1318 1054 476 260 26 26 chr5 146941562 146941716 -56143816 + L2 LINE L2 3158 3311 -2 2352 91 0 0 chr5 146942093 146942402 -56143130 - AluSp SINE Alu 0 309 1 412 270 139 7 chr5 146942574 146942711 -56142821 + MIR SINE MIR 2 156 -106 548 291 59 18 chr5 146943900 146944120 -56141412 - MIR SINE MIR -32 230 2 265 250 22 81 chr5 146944126 146944262 -56141270 + MIR SINE MIR 102 229 -33 856 56 19 0 chr5 146944663 146944771 -56140761 + HY1 scRNA scRNA 1 110 -2 2475 87 0 0 chr5 146944771 146945080 -56140452 - AluY SINE Alu 0 311 3 24 32 0 0 chr5 146945089 146945120 -56140412 + AT_rich Low_complexity Low_complexity 1 31 0 324 311 142 25 chr5 146945120 146945438 -56140094 + L1ME3A LINE L1 5595 5949 -221 1936 170 12 68 chr5 146945586 146945998 -56139534 + MLT1D LTR MaLR 117 505 0 200 318 91 15 chr5 146947866 146947998 -56137534 - L2 LINE L2 -18 3254 3113 531 210 35 7 chr5 146948137 146948280 -56137252 + MIR SINE MIR 20 166 -96 406 197 73 62 chr5 146948935 146948964 -56136568 - L1ME4a LINE L1 0 6121 6094 1703 159 27 40 chr5 146948964 146949265 -56136267 + AluJb SINE Alu 1 297 -15 406 197 73 62 chr5 146949265 146949413 -56136119 - L1ME4a LINE L1 -27 6094 5942 225 0 0 0 chr5 146949523 146949548 -56135984 + (A)n Simple_repeat Simple_repeat 1 25 0 537 227 20 47 chr5 146949831 146949981 -56135551 - MIR SINE MIR -60 202 57 2194 157 40 73 chr5 146950512 146950574 -56134958 - MLT1D LTR MaLR 0 505 443 1960 157 0 3 chr5 146950574 146950880 -56134652 - AluJo SINE Alu -7 305 1 2194 157 40 73 chr5 146950880 146951339 -56134193 - MLT1D LTR MaLR -62 443 1 827 124 0 0 chr5 146952026 146952139 -56133393 - MER81 DNA DNA -1 113 1 2210 117 13 0 chr5 146956960 146957258 -56128274 - AluSx SINE Alu -10 302 1 821 195 60 32 chr5 146958079 146958264 -56127268 - MER3 DNA MER1_type 0 209 20 2286 103 0 13 chr5 146958562 146958725 -56126807 - AluSq SINE Alu -17 296 137 2623 44 0 0 chr5 146958725 146959023 -56126509 - AluY SINE Alu -13 298 1 2286 103 0 13 chr5 146959023 146959159 -56126373 - AluSq SINE Alu -176 137 1 2081 83 83 0 chr5 146959169 146959446 -56126086 - AluSq SINE Alu -13 300 1 1394 168 20 8 chr5 146960985 146961229 -56124303 + AluSx SINE Alu 60 306 -6 227 190 69 0 chr5 146961285 146961343 -56124189 - MIR SINE MIR -125 137 76 910 121 13 6 chr5 146961419 146961576 -56123956 + (TTCC)n Simple_repeat Simple_repeat 3 160 0 2149 108 10 0 chr5 146961576 146961864 -56123668 - AluSx SINE Alu -17 295 2 272 318 16 39 chr5 146961883 146962012 -56123520 + L2 LINE L2 3185 3310 -3 405 290 161 0 chr5 146962076 146962231 -56123301 - MER5A DNA MER1_type -6 183 4 582 234 31 0 chr5 146962258 146962386 -56123146 + MER33 DNA MER1_type 17 148 -176 191 61 30 0 chr5 146962394 146962427 -56123105 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 2411 93 3 0 chr5 146962430 146962731 -56122801 + AluSq SINE Alu 1 302 -11 251 231 15 15 chr5 146962983 146963048 -56122484 - HAL1 LINE L1 0 2507 2443 1793 175 7 0 chr5 146963178 146963470 -56122062 + AluJb SINE Alu 1 294 -18 213 154 0 0 chr5 146963811 146963850 -56121682 - L2 LINE L2 -255 3058 3020 251 269 52 30 chr5 146963924 146964058 -56121474 - L2 LINE L2 -1059 2255 2119 533 224 93 9 chr5 146964058 146964272 -56121260 + L2 LINE L2 1981 2212 -1102 347 285 39 23 chr5 146964287 146964417 -56121115 + MER94 DNA DNA 1 132 -2 789 283 172 40 chr5 146964420 146964884 -56120648 + L2 LINE L2 2216 2754 -560 2669 119 21 26 chr5 146964884 146965311 -56120221 - MSTA LTR MaLR -3 425 1 789 283 172 40 chr5 146965311 146965352 -56120180 + L2 LINE L2 2754 2788 -526 1312 213 37 48 chr5 146965582 146965958 -56119574 - MLT1A2 LTR MaLR 0 374 3 29 0 0 0 chr5 146966666 146966695 -56118837 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 146968433 146968460 -56117072 + (T)n Simple_repeat Simple_repeat 1 27 0 760 282 171 40 chr5 146969962 146970511 -56115021 - L1ME LINE L1 -301 5820 5344 2348 105 0 13 chr5 146970511 146970824 -56114708 - AluSx SINE Alu -3 309 1 760 282 171 40 chr5 146970824 146970988 -56114544 - L1ME LINE L1 -777 5344 5203 1754 156 4 4 chr5 146970988 146971258 -56114274 - AluJb SINE Alu -5 307 38 760 282 171 40 chr5 146971258 146972416 -56113116 - L1ME LINE L1 -918 5203 3682 291 301 88 0 chr5 146972577 146972690 -56112842 + MIR SINE MIR 69 191 -71 9256 69 20 1 chr5 146974227 146975511 -56110021 + L1P LINE L1 2467 3775 -2371 14037 133 11 26 chr5 146975617 146977896 -56107636 - L1P LINE L1 -3890 2256 11 3294 153 41 38 chr5 146977905 146979020 -56106512 + L1MA2 LINE L1 3123 4253 -3312 9191 192 41 50 chr5 146979030 146980687 -56104845 + L1PA13 LINE L1 2 1639 -5148 2221 113 14 165 chr5 146980687 146980988 -56104544 + MSTA LTR MaLR 1 197 -231 1883 159 7 13 chr5 146980988 146981290 -56104242 + AluSx SINE Alu 2 301 -11 2221 113 14 165 chr5 146981290 146981492 -56104040 + MSTA LTR MaLR 197 428 0 9191 192 41 50 chr5 146981492 146981892 -56103640 + L1PA13 LINE L1 1639 2041 -4746 673 172 19 32 chr5 146982023 146982180 -56103352 + L1PA15 LINE L1 6004 6158 -7 11518 150 35 12 chr5 146982184 146982727 -56102805 + L1MA2 LINE L1 4248 4777 -2946 2361 71 4 0 chr5 146982727 146983027 -56102505 + AluSg SINE Alu 1 301 0 11518 150 35 12 chr5 146983027 146985868 -56099664 + L1MA2 LINE L1 4777 7721 -2 21 0 0 0 chr5 146985923 146985944 -56099588 + AT_rich Low_complexity Low_complexity 1 21 0 378 333 40 11 chr5 146987413 146987587 -56097945 + MIR SINE MIR 1 179 -83 267 150 0 0 chr5 146987616 146987691 -56097841 - Alu SINE Alu 0 317 243 2518 136 8 0 chr5 146989207 146989568 -56095964 + MSTC LTR MaLR 1 364 -64 927 129 15 0 chr5 146989568 146989700 -56095832 + FRAM SINE Alu 1 132 -44 932 89 8 253 chr5 146989802 146989856 -56095676 + MSTA LTR MaLR 235 300 -128 1800 157 13 13 chr5 146989856 146990156 -56095376 + AluJb SINE Alu 2 301 -11 932 89 8 253 chr5 146990156 146990358 -56095174 + MSTA LTR MaLR 300 428 0 7392 214 36 49 chr5 146990368 146992273 -56093259 + L1PA15 LINE L1 999 2833 -3313 4661 41 20 0 chr5 146992273 146992832 -56092700 + L1PA7 LINE L1 5572 6141 -13 7392 214 36 49 chr5 146992832 146993395 -56092137 + L1PA15 LINE L1 2833 3402 -2744 5197 131 20 6 chr5 146993431 146994722 -56090810 + L1PA15 LINE L1 4844 6161 -4 1708 198 67 17 chr5 146994723 146995244 -56090288 + L1 LINE L1 2829 3375 -2771 594 51 13 0 chr5 146995291 146995370 -56090162 + AluSg1 SINE Alu 1 80 -229 188 179 250 0 chr5 146995934 146995990 -56089542 + L2 LINE L2 3236 3305 -8 221 267 145 23 chr5 146996055 146996186 -56089346 - MIR SINE MIR -14 248 102 204 292 177 9 chr5 146996591 146996704 -56088828 + L2 LINE L2 3140 3271 -1 284 246 51 59 chr5 146996872 146996990 -56088542 + L2 LINE L2 3197 3313 0 2323 100 0 35 chr5 146998567 146998886 -56086646 - AluSq SINE Alu -5 308 1 390 245 0 11 chr5 147004485 147004579 -56080953 - MIR SINE MIR -140 122 30 330 332 114 26 chr5 147004844 147005115 -56080417 - L2 LINE L2 -500 2814 2520 182 230 166 101 chr5 147006374 147006513 -56079019 + MIR SINE MIR 41 188 -74 205 332 158 16 chr5 147006720 147006910 -56078622 + L2 LINE L2 2894 3110 -162 217 307 44 36 chr5 147007857 147007994 -56077538 - MIR3 SINE MIR -18 190 53 240 259 0 0 chr5 147010461 147010519 -56075013 - L1MC/D LINE L1 -1900 5908 5851 507 281 39 20 chr5 147010692 147010895 -56074637 + MIR SINE MIR 13 219 -43 354 243 19 0 chr5 147011263 147011370 -56074162 - L2 LINE L2 -411 2903 2795 217 289 205 10 chr5 147011399 147011669 -56073863 + L2 LINE L2 2707 3020 -252 2333 104 10 3 chr5 147013851 147014160 -56071372 + AluSx SINE Alu 1 311 -1 374 85 17 0 chr5 147016731 147016790 -56068742 + (TG)n Simple_repeat Simple_repeat 1 60 0 243 133 0 0 chr5 147016790 147016835 -56068697 + (GA)n Simple_repeat Simple_repeat 2 46 0 396 310 40 0 chr5 147017589 147017763 -56067769 + L2 LINE L2 2915 3095 -177 259 277 42 67 chr5 147018695 147018814 -56066718 + MIR SINE MIR 20 135 -127 353 302 116 102 chr5 147020723 147021173 -56064359 - L2 LINE L2 0 3272 2817 2899 7 0 0 chr5 147021286 147021589 -56063943 + AluYa5 SINE Alu 3 305 -6 2011 104 4 7 chr5 147021598 147021867 -56063665 + AluSc SINE Alu 29 296 -13 382 223 0 43 chr5 147021986 147022080 -56063452 + L1ME3A LINE L1 5674 5763 -407 1061 233 62 17 chr5 147022088 147022376 -56063156 + L1ME3A LINE L1 5865 6165 -5 190 289 10 77 chr5 147022687 147022791 -56062741 - L2 LINE L2 -1887 1427 1331 194 319 72 0 chr5 147023301 147023370 -56062162 + MIR SINE MIR 189 262 0 213 39 0 0 chr5 147025831 147025857 -56059675 + (TC)n Simple_repeat Simple_repeat 1 26 0 378 141 0 28 chr5 147025868 147025939 -56059593 - L1MB5 LINE L1 -8 6166 6098 411 283 92 7 chr5 147026110 147026262 -56059270 - MIR SINE MIR -58 204 40 243 133 0 0 chr5 147027138 147027183 -56058349 + (T)n Simple_repeat Simple_repeat 1 45 0 264 126 23 46 chr5 147028529 147028616 -56056916 + CT-rich Low_complexity Low_complexity 2 86 0 478 303 93 6 chr5 147029634 147029796 -56055736 + MIR SINE MIR 39 214 -48 2401 75 0 0 chr5 147033031 147033313 -56052219 + AluY SINE Alu 16 297 -14 401 215 43 0 chr5 147035134 147035227 -56050305 + MER5A DNA MER1_type 10 106 -83 2380 70 0 7 chr5 147036026 147036344 -56049188 - AluY SINE Alu 0 316 1 1688 174 0 46 chr5 147036358 147036663 -56048869 - AluJo SINE Alu -21 291 1 208 306 34 68 chr5 147037695 147037842 -56047690 + MIR3 SINE MIR 6 147 -61 213 281 31 0 chr5 147037896 147037960 -56047572 + MIR SINE MIR 113 178 -84 2009 163 0 7 chr5 147037981 147038288 -56047244 - AluSx SINE Alu -7 305 1 333 242 0 44 chr5 147038330 147038421 -56047111 + MIR SINE MIR 166 252 -10 595 205 93 12 chr5 147038997 147039158 -56046374 + MER69A DNA AcHobo 4 177 0 189 262 33 16 chr5 147039195 147039256 -56046276 + MIR SINE MIR 169 230 -32 39 38 0 0 chr5 147039293 147039346 -56046186 + AT_rich Low_complexity Low_complexity 1 53 0 392 286 112 14 chr5 147039381 147039668 -56045864 - L1M4 LINE L1 -2310 3836 3522 524 328 44 6 chr5 147039712 147039895 -56045637 + MIR SINE MIR 23 212 -50 181 328 43 17 chr5 147039907 147040023 -56045509 - L2 LINE L2 -572 2742 2624 1751 129 0 102 chr5 147041480 147041835 -56043697 - AluJb SINE Alu 0 312 1 1913 131 0 14 chr5 147042040 147042315 -56043217 - AluSx SINE Alu -41 271 1 2216 142 0 0 chr5 147042401 147042704 -56042828 + AluJb SINE Alu 1 303 -9 389 316 53 13 chr5 147043428 147043580 -56041952 - MIR3 SINE MIR -31 177 20 22 80 0 0 chr5 147044809 147044859 -56040673 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 147046970 147046991 -56038541 + AT_rich Low_complexity Low_complexity 1 21 0 340 330 120 58 chr5 147048622 147049164 -56036368 + L2 LINE L2 2689 3272 0 25 0 0 0 chr5 147049664 147049689 -56035843 + AT_rich Low_complexity Low_complexity 1 25 0 1638 136 68 34 chr5 147050100 147050394 -56035138 - AluJb SINE Alu -8 304 1 23 0 0 0 chr5 147051554 147051577 -56033955 + AT_rich Low_complexity Low_complexity 1 23 0 2545 48 7 7 chr5 147051839 147052148 -56033384 + AluY SINE Alu 1 309 -2 21 36 0 0 chr5 147053040 147053068 -56032464 + AT_rich Low_complexity Low_complexity 1 28 0 552 376 59 28 chr5 147054161 147054668 -56030864 + L2 LINE L2 2518 3049 -223 276 288 27 0 chr5 147055542 147055615 -56029917 + MIR3 SINE MIR 109 183 -25 390 291 45 9 chr5 147056006 147056116 -56029416 + L2 LINE L2 3153 3266 -6 2941 118 45 5 chr5 147056523 147056971 -56028561 - LTR45B LTR ERV1 0 489 24 1866 149 13 10 chr5 147056972 147057344 -56028188 + AluJo SINE Alu 1 373 0 466 145 0 0 chr5 147057786 147057862 -56027670 + LTR45B LTR ERV1 104 179 -310 1874 130 38 14 chr5 147059594 147059886 -56025646 - AluSx SINE Alu -13 299 1 485 289 66 26 chr5 147060118 147060391 -56025141 - L1ME4a LINE L1 -263 5858 5575 28 48 0 0 chr5 147060824 147060866 -56024666 + AT_rich Low_complexity Low_complexity 1 42 0 181 331 116 35 chr5 147061096 147061268 -56024264 + L2 LINE L2 1420 1605 -1709 1208 296 172 21 chr5 147061328 147062083 -56023449 - L2 LINE L2 -210 3062 2200 2455 87 0 0 chr5 147062262 147062573 -56022959 + AluSq SINE Alu 1 311 -2 1309 274 183 44 chr5 147064149 147065174 -56020358 + HAL1 LINE L1 17 1184 -1323 514 76 53 168 chr5 147065181 147065248 -56020284 + L1MB7 LINE L1 6069 6115 -69 2016 133 3 7 chr5 147065248 147065548 -56019984 + AluSx SINE Alu 1 299 -13 514 76 53 168 chr5 147065548 147065611 -56019921 + L1MB7 LINE L1 6115 6184 0 * 521 245 40 147 chr5 147065609 147066038 -56019494 + HAL1 LINE L1 1184 1566 -941 1527 207 89 11 chr5 147066043 147066415 -56019117 - LTR52 LTR ERVL -13 408 8 1060 211 86 112 chr5 147066422 147066843 -56018689 + HAL1 LINE L1 1576 2006 -501 1733 134 91 4 chr5 147066843 147067119 -56018413 + AluSx SINE Alu 1 300 -12 1060 211 86 112 chr5 147067119 147067482 -56018050 + HAL1 LINE L1 2006 2504 -3 311 174 43 11 chr5 147068319 147068411 -56017121 - L1ME4a LINE L1 -791 5355 5261 947 142 0 0 chr5 147068425 147068566 -56016966 - FLAM_C SINE Alu -2 141 1 1450 206 67 34 chr5 147068566 147068628 -56016904 - L1ME4a LINE L1 -867 5279 5221 2153 119 3 16 chr5 147068628 147068939 -56016593 - AluSc SINE Alu -2 307 1 1450 206 67 34 chr5 147068939 147069353 -56016179 - L1ME4a LINE L1 -925 5221 4787 2089 89 3 63 chr5 147069454 147069770 -56015762 + AluSg SINE Alu 1 297 -13 561 318 121 5 chr5 147070627 147071042 -56014490 + HAL1 LINE L1 2 527 -1980 271 258 28 10 chr5 147071376 147071479 -56014053 + MLT1I LTR MaLR 288 549 0 1167 224 20 57 chr5 147071479 147071881 -56013651 + HAL1 LINE L1 520 906 -1601 3197 253 75 45 chr5 147071886 147072921 -56012611 + L1M3d LINE L1 413 1486 -4817 927 173 19 12 chr5 147072921 147073083 -56012449 + FRAM SINE Alu 1 163 -3 3197 253 75 45 chr5 147073083 147073166 -56012366 + L1M3d LINE L1 1486 1565 -4738 * 4804 143 66 15 chr5 147073161 147074187 -56011345 + L1PA15 LINE L1 5090 6162 -3 * 12184 200 58 30 chr5 147074184 147075550 -56009982 + L1MB1 LINE L1 1185 2512 -3892 2630 30 3 0 chr5 147075550 147075851 -56009681 - AluY SINE Alu -9 302 1 12184 200 58 30 chr5 147075851 147077753 -56007779 + L1MB1 LINE L1 2512 4360 -2044 2133 122 7 0 chr5 147077753 147078057 -56007475 + AluSx SINE Alu 1 306 -6 12184 200 58 30 chr5 147078057 147079891 -56005641 + L1MB1 LINE L1 4360 6398 -6 34 42 0 0 chr5 147079891 147079939 -56005593 + AT_rich Low_complexity Low_complexity 1 48 0 990 206 122 74 chr5 147079963 147080462 -56005070 + HAL1 LINE L1 903 1425 -1082 1885 132 18 0 chr5 147080534 147080815 -56004717 + AluSx SINE Alu 3 288 -24 481 265 134 17 chr5 147080828 147081106 -56004426 + HAL1 LINE L1 2011 2326 -181 2219 130 24 9 chr5 147081106 147081445 -56004087 + MER2 DNA MER2_type 1 344 0 481 265 134 17 chr5 147081445 147081457 -56004075 + HAL1 LINE L1 2326 2335 -172 2140 122 3 0 chr5 147082048 147082342 -56003190 - AluSx SINE Alu -15 297 3 871 161 0 0 chr5 147082364 147082488 -56003044 - FLAM_C SINE Alu -17 126 3 2189 186 73 68 chr5 147082539 147082718 -56002814 - L1MC4a LINE L1 -203 7605 7428 1814 148 7 30 chr5 147082718 147083022 -56002510 + AluJo SINE Alu 1 297 -15 2189 186 73 68 chr5 147083022 147083529 -56002003 - L1MC4a LINE L1 -380 7428 6916 1664 233 53 33 chr5 147083527 147084107 -56001425 - L1MC4a LINE L1 -1347 6461 5870 * 2562 211 18 22 chr5 147084251 147084853 -56000679 - L1MC4a LINE L1 -1852 5956 5357 326 308 48 0 chr5 147084856 147084960 -56000572 - L1MC4a LINE L1 -884 5262 5154 425 266 93 53 chr5 147084987 147085278 -56000254 - MLT1L LTR MaLR -109 402 110 703 331 61 18 chr5 147085567 147085960 -55999572 - MLT1K LTR MaLR -4 584 175 2055 118 7 10 chr5 147086360 147086664 -55998868 - AluSx SINE Alu -9 303 1 368 184 11 58 chr5 147086690 147086777 -55998755 + MIR SINE MIR 124 206 -56 418 204 87 68 chr5 147087154 147087257 -55998275 - L2 LINE L2 -1 3312 3208 211 343 190 4 chr5 147087296 147087538 -55997994 - L2 LINE L2 -787 2527 2241 22 0 0 0 chr5 147088124 147088146 -55997386 + AT_rich Low_complexity Low_complexity 1 22 0 13815 116 42 12 chr5 147138341 147140759 -55944773 + L1P3 LINE L1 773 3244 -3217 528 157 65 9 chr5 147140875 147140983 -55944549 - Charlie2 DNA MER1_type -2269 513 400 457 152 0 0 chr5 147140983 147141049 -55944483 - Tigger1 DNA MER2_type -1 2417 2352 * 1275 72 83 0 chr5 147141046 147141226 -55944306 - Tigger1 DNA MER2_type -1325 1093 899 1323 255 83 11 chr5 147141226 147141775 -55943757 - L1M4 LINE L1 -2323 3823 3196 4543 167 31 35 chr5 147141783 147143469 -55942063 - L1PB1 LINE L1 -8 6143 4471 2299 97 0 38 chr5 147145408 147145728 -55939804 + AluSq SINE Alu 1 308 -5 395 241 91 87 chr5 147147064 147147537 -55937995 + L1MEd LINE L1 720 1194 -5011 295 159 43 0 chr5 147147538 147147607 -55937925 + GA-rich Low_complexity Low_complexity 2 73 0 541 313 27 13 chr5 147147607 147148034 -55937498 + L1MEd LINE L1 1145 1617 -4779 1218 279 75 49 chr5 147148197 147148482 -55937050 + L1MEd LINE L1 1863 2139 -4076 209 56 0 28 chr5 147148482 147148518 -55937014 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1218 279 75 49 chr5 147148518 147149195 -55936337 + L1MEd LINE L1 2139 2830 -3385 1326 130 97 27 chr5 147149195 147149495 -55936037 + MER33 DNA MER1_type 4 324 0 1218 279 75 49 chr5 147149495 147149749 -55935783 + L1MEd LINE L1 2830 3076 -3139 213 39 0 0 chr5 147152090 147152116 -55933416 + (TC)n Simple_repeat Simple_repeat 1 26 0 397 141 0 28 chr5 147152127 147152198 -55933334 - L1MB5 LINE L1 -8 6166 6098 435 283 92 7 chr5 147152369 147152521 -55933011 - MIR SINE MIR -58 204 40 207 278 99 26 chr5 147153900 147154051 -55931481 + L2 LINE L2 2264 2425 -889 218 340 41 0 chr5 147154767 147154864 -55930668 - MIR SINE MIR -63 145 45 192 299 178 0 chr5 147155109 147155216 -55930316 + MIR SINE MIR 49 174 -88 181 233 23 0 chr5 147155908 147155951 -55929581 - L3 LINE CR1 -1264 313 270 546 306 49 11 chr5 147156027 147156210 -55929322 - MIR SINE MIR -50 212 23 372 279 112 14 chr5 147156254 147156541 -55928991 + L1MEd LINE L1 3591 3905 -2310 39 38 0 0 chr5 147156576 147156629 -55928903 + AT_rich Low_complexity Low_complexity 1 53 0 204 262 33 16 chr5 147156666 147156727 -55928805 - MIR SINE MIR -32 230 169 644 205 93 12 chr5 147156764 147156925 -55928607 - MER69A DNA AcHobo 0 177 4 352 242 0 44 chr5 147157501 147157592 -55927940 - MIR SINE MIR -10 252 166 2004 163 0 7 chr5 147157634 147157941 -55927591 + AluSx SINE Alu 1 305 -7 227 275 58 0 chr5 147157962 147158031 -55927501 - MIR SINE MIR -84 178 106 1563 181 11 18 chr5 147158566 147158843 -55926689 + AluJo SINE Alu 1 275 -37 306 364 70 31 chr5 147159146 147159503 -55926029 + L2 LINE L2 2889 3259 -13 190 250 33 50 chr5 147159504 147159564 -55925968 - L2 LINE L2 -4 3268 3210 752 319 110 9 chr5 147159833 147160395 -55925137 - L2 LINE L2 -141 3172 2543 4188 109 26 2 chr5 147160941 147161557 -55923975 + L1P3 LINE L1 5 635 -5826 4974 128 89 21 chr5 147165184 147165716 -55919816 - Tigger2 DNA MER2_type -1131 1587 968 2005 151 0 13 chr5 147165716 147166021 -55919511 - AluSx SINE Alu -11 301 1 4974 128 89 21 chr5 147166021 147166384 -55919148 - Tigger2 DNA MER2_type -1750 968 631 1070 172 14 47 chr5 147166879 147167094 -55918438 - MER3 DNA MER1_type 0 209 2 327 130 0 0 chr5 147167244 147167298 -55918234 + (CA)n Simple_repeat Simple_repeat 1 54 0 21 0 0 0 chr5 147168803 147168824 -55916708 + AT_rich Low_complexity Low_complexity 1 21 0 238 245 53 11 chr5 147168952 147169046 -55916486 + MLT1L LTR MaLR 511 608 -7 12722 52 17 2 chr5 147169548 147171985 -55913547 - L1PA4 LINE L1 -4 6151 3687 411 245 0 11 chr5 147172402 147172496 -55913036 - MIR SINE MIR -140 122 30 345 336 108 34 chr5 147172737 147173032 -55912500 - L2 LINE L2 -478 2836 2520 208 230 166 101 chr5 147174291 147174430 -55911102 + MIR SINE MIR 41 188 -74 248 332 158 16 chr5 147174637 147174827 -55910705 + L2 LINE L2 2894 3110 -162 249 312 110 29 chr5 147175774 147175947 -55909585 - MIR3 SINE MIR -18 190 4 234 259 0 0 chr5 147178381 147178439 -55907093 - L1MC/D LINE L1 -1900 5908 5851 546 281 39 20 chr5 147178612 147178815 -55906717 + MIR SINE MIR 13 219 -43 397 241 36 0 chr5 147179172 147179284 -55906248 - L2 LINE L2 -411 2903 2788 242 306 153 18 chr5 147179308 147179579 -55905953 + L2 LINE L2 2707 3020 -252 2072 127 16 3 chr5 147181765 147182073 -55903459 + AluSx SINE Alu 1 312 0 190 226 71 36 chr5 147184424 147184508 -55901024 + MIR3 SINE MIR 93 179 -29 449 84 14 0 chr5 147184657 147184728 -55900804 + (TG)n Simple_repeat Simple_repeat 1 72 0 243 133 0 0 chr5 147184728 147184773 -55900759 + (GA)n Simple_repeat Simple_repeat 2 46 0 448 308 43 0 chr5 147185527 147185712 -55899820 + L2 LINE L2 2915 3107 -165 183 206 55 41 chr5 147185824 147185897 -55899635 - L2 LINE L2 -1319 1995 1922 286 270 58 58 chr5 147186627 147186764 -55898768 + MIR SINE MIR 11 147 -61 457 320 98 84 chr5 147188674 147189124 -55896408 - L2 LINE L2 0 3272 2817 2865 3 0 3 chr5 147189237 147189542 -55895990 + AluYa5 SINE Alu 3 306 -5 2006 104 4 7 chr5 147189551 147189820 -55895712 + AluSc SINE Alu 29 296 -13 369 221 0 53 chr5 147189939 147190034 -55895498 + L1ME3A LINE L1 5674 5763 -407 759 240 64 26 chr5 147190042 147190275 -55895257 + L1ME3A LINE L1 5865 6106 -64 20722 138 16 24 chr5 147190379 147195074 -55890458 - L1P3 LINE L1 -1745 4716 27 466 270 7 22 chr5 147195079 147195216 -55890316 + L1MCc LINE L1 289 423 -6000 2131 132 3 7 chr5 147195347 147195669 -55889863 + AluSx SINE Alu 1 312 0 706 226 91 79 chr5 147195729 147196070 -55889462 + L1MCc LINE L1 871 1215 -5208 730 161 51 0 chr5 147196158 147196295 -55889237 - L1PA10 LINE L1 0 6168 6025 247 226 24 0 chr5 147196298 147196382 -55889150 + L1MCc LINE L1 1808 1893 -5048 636 148 157 0 chr5 147196389 147196497 -55889035 + FLAM_C SINE Alu 5 129 -4 214 143 41 0 chr5 147196497 147196546 -55888986 + (TA)n Simple_repeat Simple_repeat 1 51 0 566 285 16 26 chr5 147196559 147196864 -55888668 + L1MCc LINE L1 1883 2184 -4757 1025 178 17 34 chr5 147196877 147197113 -55888419 - L1MC1 LINE L1 -25 6588 6357 1449 125 0 14 chr5 147197118 147197326 -55888206 + AluSx SINE Alu 5 209 -103 1921 143 6 34 chr5 147197326 147197677 -55887855 - L1MC1 LINE L1 -434 6179 5839 * 10447 146 108 25 chr5 147197676 147199218 -55886314 - L1MC1 LINE L1 -3998 2428 643 2250 114 0 0 chr5 147199218 147199517 -55886015 - AluSx SINE Alu -13 299 1 10447 146 108 25 chr5 147199517 147200212 -55885320 - L1MC1 LINE L1 -5783 643 7 1511 240 73 15 chr5 147200200 147200616 -55884916 + L1MCc LINE L1 2369 2885 -4237 * 3402 32 2 5 chr5 147200616 147201026 -55884506 + L1PA4 LINE L1 5743 6151 -4 1511 240 73 15 chr5 147201026 147201272 -55884260 + L1MCc LINE L1 2885 3115 -4007 4677 158 12 19 chr5 147201276 147201497 -55884035 + L1MC2 LINE L1 5186 5407 -937 2180 123 0 0 chr5 147201497 147201790 -55883742 + AluSg SINE Alu 1 293 -17 4677 158 12 19 chr5 147201790 147202521 -55883011 + L1MC2 LINE L1 5407 6132 -212 243 133 0 0 chr5 147203046 147203091 -55882441 + (T)n Simple_repeat Simple_repeat 1 45 0 264 126 23 46 chr5 147204438 147204525 -55881007 + CT-rich Low_complexity Low_complexity 2 86 0 489 297 93 28 chr5 147205524 147205706 -55879826 + MIR SINE MIR 21 214 -48 2366 78 0 0 chr5 147208940 147209222 -55876310 + AluY SINE Alu 16 297 -14 429 215 43 0 chr5 147211042 147211135 -55874397 + MER5A DNA MER1_type 10 106 -83 185 309 71 48 chr5 147211482 147211566 -55873966 - L3 LINE CR1 -1062 515 430 1530 87 0 5 chr5 147211934 147212161 -55873371 - AluY SINE Alu 0 316 91 312 246 51 59 chr5 147213463 147213581 -55871951 - L2 LINE L2 0 3313 3197 193 171 29 71 chr5 147213617 147213687 -55871845 + L2 LINE L2 3204 3270 -2 232 284 184 9 chr5 147213753 147213862 -55871670 - L2 LINE L2 -5 3267 3140 243 267 145 23 chr5 147214267 147214398 -55871134 + MIR SINE MIR 102 248 -14 206 179 250 0 chr5 147214465 147214521 -55871011 - L2 LINE L2 -8 3305 3236 235 372 70 0 chr5 147215567 147215653 -55869879 + MER91A DNA MER1_type 105 196 0 291 261 190 7 chr5 147217052 147217194 -55868338 + MIR SINE MIR 47 214 -48 180 236 18 55 chr5 147217285 147217340 -55868192 - MIR SINE MIR 0 262 210 216 0 0 0 chr5 147218274 147218298 -55867234 + (CCCGG)n Simple_repeat Simple_repeat 4 27 0 244 248 143 0 chr5 147220837 147220951 -55864581 - MIR SINE MIR -63 145 6 458 293 52 42 chr5 147220952 147221164 -55864368 + LTR67 LTR ERVL 48 261 -296 328 263 95 58 chr5 147221676 147221813 -55863719 - L1ME4a LINE L1 -1 6120 5979 422 192 0 67 chr5 147221822 147221889 -55863643 - MIR SINE MIR 0 262 203 1654 165 40 65 chr5 147221889 147222289 -55863243 + MLT1B LTR MaLR 1 390 0 422 192 0 67 chr5 147222289 147222325 -55863207 - MIR SINE MIR -59 203 166 1761 95 4 46 chr5 147222431 147222693 -55862839 - AluSq SINE Alu -62 251 1 587 204 28 0 chr5 147222787 147222895 -55862637 - L2 LINE L2 0 3313 3203 510 318 87 40 chr5 147223235 147223534 -55861998 + L1ME4a LINE L1 4994 5306 -840 731 286 122 8 chr5 147224053 147224438 -55861094 + L1ME4a LINE L1 5691 6119 -2 304 274 90 98 chr5 147225635 147225912 -55859620 + L1ME4a LINE L1 3555 3829 -2317 582 186 93 17 chr5 147226651 147226769 -55858763 - MIR SINE MIR -62 146 20 337 309 86 0 chr5 147228335 147228555 -55856977 + L1ME4a LINE L1 4358 4596 -1550 25 51 0 0 chr5 147228748 147228787 -55856745 + AT_rich Low_complexity Low_complexity 1 39 0 593 272 144 39 chr5 147228836 147229295 -55856237 + L1ME4a LINE L1 5318 5824 -297 517 167 196 0 chr5 147229361 147229463 -55856069 - L2 LINE L2 0 3313 3192 399 198 42 10 chr5 147229585 147229681 -55855851 + L1ME4a LINE L1 6023 6121 0 202 246 157 78 chr5 147230462 147230653 -55854879 + L2 LINE L2 219 424 -2890 1159 276 120 26 chr5 147231630 147232203 -55853329 + L2 LINE L2 1707 2333 -981 675 296 190 23 chr5 147232506 147233303 -55852229 + L2 LINE L2 2377 3300 -13 199 248 150 26 chr5 147234327 147234440 -55851092 + L2 LINE L2 2875 3001 -271 2205 132 0 3 chr5 147234513 147234823 -55850709 - AluJb SINE Alu -3 309 1 729 248 33 85 chr5 147234848 147235155 -55850377 + L2 LINE L2 3022 3312 -1 186 339 89 18 chr5 147235156 147235268 -55850264 + L2 LINE L2 3133 3252 -20 340 233 37 111 chr5 147235690 147235879 -55849653 + L1M4 LINE L1 4874 5048 -1098 799 208 16 20 chr5 147235941 147236125 -55849407 + L1ME2 LINE L1 5641 5820 -346 1935 169 0 10 chr5 147236125 147236433 -55849099 - AluSx SINE Alu -7 305 1 799 208 16 20 chr5 147236433 147236467 -55849065 + L1ME2 LINE L1 5820 5853 -313 635 234 35 12 chr5 147236434 147236605 -55848927 - L1ME3 LINE L1 -11 6151 5977 * 302 299 96 48 chr5 147236637 147236804 -55848728 + L1M4 LINE L1 5157 5331 -815 289 234 32 0 chr5 147236818 147236912 -55848620 + GA-rich Low_complexity Low_complexity 3 99 0 396 296 144 67 chr5 147236934 147237350 -55848182 - L2 LINE L2 -5 3267 2820 275 305 109 41 chr5 147237380 147237773 -55847759 - L2 LINE L2 -566 2748 2329 277 24 48 0 chr5 147238383 147238425 -55847107 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 1937 121 29 60 chr5 147238661 147238975 -55846557 - AluSx SINE Alu -8 304 1 307 300 222 0 chr5 147238975 147239205 -55846327 - L1M4 LINE L1 -2127 4019 3739 321 351 101 12 chr5 147239304 147239472 -55846060 + L2 LINE L2 3073 3255 -17 258 352 9 19 chr5 147240348 147240453 -55845079 - L2 LINE L2 0 3313 3210 1396 130 8 46 chr5 147240675 147240914 -55844618 - MER30 DNA MER1_type 0 230 1 201 74 0 0 chr5 147243917 147243944 -55841588 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2178 260 62 22 chr5 147244880 147245829 -55839703 - L2 LINE L2 0 3313 2323 229 183 247 0 chr5 147245812 147245905 -55839627 + MIR SINE MIR 136 251 -11 * 330 131 66 0 chr5 147246337 147246398 -55839134 - MIR SINE MIR -92 170 106 284 293 0 40 chr5 147246393 147246492 -55839040 + MIR SINE MIR 168 262 0 * 1507 82 111 0 chr5 147247188 147247395 -55838137 - MER30 DNA MER1_type 0 230 1 305 297 172 7 chr5 147248770 147248915 -55836617 + L2 LINE L2 2545 2713 -601 632 237 137 32 chr5 147248917 147249023 -55836509 + L2 LINE L2 2994 3088 -225 1238 130 47 16 chr5 147249023 147249215 -55836317 - L1PB4 LINE L1 -2 6154 5957 632 237 137 32 chr5 147249215 147249386 -55836146 + L2 LINE L2 3088 3300 -13 261 0 0 0 chr5 147249386 147249415 -55836117 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 193 345 147 17 chr5 147250239 147250416 -55835116 + MIR SINE MIR 13 212 -50 199 363 30 0 chr5 147251018 147251153 -55834379 + L2 LINE L2 2006 2144 -1170 1444 271 38 5 chr5 147251896 147252295 -55833237 + LTR16A LTR ERVL 33 444 -6 4403 188 120 4 chr5 147252303 147253321 -55832211 + HERV16 LTR ERVL 3 1138 -3858 777 189 77 0 chr5 147253387 147253556 -55831976 + HERV16 LTR ERVL 1253 1434 -3562 3624 225 100 13 chr5 147253606 147254518 -55831014 + HERV16 LTR ERVL 1573 2563 -2433 244 346 77 0 chr5 147255303 147255407 -55830125 + L2 LINE L2 3200 3311 -2 209 106 0 21 chr5 147259955 147260002 -55825530 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 147260038 147260060 -55825472 + AT_rich Low_complexity Low_complexity 1 22 0 259 211 45 0 chr5 147264878 147264955 -55820577 + MIR SINE MIR 61 132 -76 1604 257 30 45 chr5 147267625 147268022 -55817510 - L1ME3 LINE L1 -2 6160 5773 1655 174 3 26 chr5 147268022 147268333 -55817199 + AluJo SINE Alu 1 304 -8 1604 257 30 45 chr5 147268333 147268511 -55817021 - L1ME3 LINE L1 -389 5773 5594 2195 87 0 7 chr5 147268574 147268872 -55816660 + AluY SINE Alu 1 296 -15 310 235 235 0 chr5 147269431 147269533 -55815999 - L2 LINE L2 0 3313 3188 1503 211 95 0 chr5 147272049 147272355 -55813177 - LTR16A LTR ERVL 0 491 116 311 262 221 0 chr5 147272489 147272661 -55812871 + MER63A DNA MER1_type 1 210 0 1023 403 17 8 chr5 147273139 147273781 -55811751 - HERV16 LTR ERVL -595 4890 4243 * 1025 299 61 22 chr5 147273774 147274182 -55811350 - HERV16 LTR ERVL -2066 3698 3275 2100 197 72 45 chr5 147274198 147274708 -55810824 - HERV16 LTR ERVL -1900 3096 2645 8593 214 36 23 chr5 147274825 147278533 -55806999 - L1PA12 LINE L1 -3286 4298 1 336 277 50 0 chr5 147278542 147278683 -55806849 + L1ME3A LINE L1 5130 5277 -869 950 182 11 11 chr5 147278687 147278868 -55806664 + AluJo SINE Alu 116 296 -16 265 281 66 0 chr5 147278881 147279002 -55806530 + L1ME3A LINE L1 5311 5439 -682 * 753 173 129 0 chr5 147279001 147279140 -55806392 - L1PA12 LINE L1 -6696 885 729 2112 111 3 3 chr5 147279181 147279478 -55806054 + AluSx SINE Alu 1 297 -15 366 240 100 13 chr5 147279490 147279640 -55805892 + L1ME3A LINE L1 5485 5647 -523 2179 159 78 30 chr5 147279666 147280099 -55805433 - MLT1D LTR MaLR -30 475 22 207 100 0 0 chr5 147280336 147280366 -55805166 + (A)n Simple_repeat Simple_repeat 1 30 0 372 312 46 87 chr5 147280384 147280602 -55804930 + L1ME3A LINE L1 5962 6170 0 2904 128 47 30 chr5 147281290 147281543 -55803989 - L1MB3 LINE L1 0 6183 5936 1814 150 0 14 chr5 147281543 147281858 -55803674 + AluSx SINE Alu 1 311 0 2904 128 47 30 chr5 147281858 147282069 -55803463 - L1MB3 LINE L1 -247 5936 5707 1999 179 22 3 chr5 147282069 147282426 -55803106 + MLT1A1 LTR MaLR 2 365 0 2904 128 47 30 chr5 147282426 147282453 -55803079 - L1MB3 LINE L1 -476 5707 5682 315 247 0 26 chr5 147282947 147283024 -55802508 - MER81 DNA DNA -20 94 20 749 157 84 89 chr5 147283399 147283590 -55801942 + LTR47A LTR ERVL 261 450 -2 2202 112 0 3 chr5 147285803 147286117 -55799415 + AluSq SINE Alu 1 313 0 183 355 111 35 chr5 147289534 147289706 -55795826 + L2 LINE L2 2973 3157 -115 200 259 25 25 chr5 147291012 147291093 -55794439 + L2 LINE L2 1340 1420 -1894 315 323 123 5 chr5 147291311 147291531 -55794001 + L2 LINE L2 1706 1951 -1363 534 291 96 27 chr5 147291594 147291814 -55793718 + MIR SINE MIR 24 258 -4 1329 154 0 5 chr5 147292076 147292284 -55793248 - AluJb SINE Alu -22 290 84 378 244 22 0 chr5 147292702 147292792 -55792740 - MER5A DNA MER1_type -82 107 16 196 222 0 0 chr5 147292868 147292904 -55792628 + L2 LINE L2 3233 3268 -4 510 291 88 16 chr5 147294893 147295075 -55790457 + MIR SINE MIR 56 250 -12 306 379 90 24 chr5 147295218 147295506 -55790026 - L1MC/D LINE L1 -2481 5561 5255 2158 89 24 3 chr5 147295636 147295929 -55789603 - AluSx SINE Alu -13 299 1 225 83 0 0 chr5 147296884 147296920 -55788612 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 419 302 151 0 chr5 147297258 147297437 -55788095 - MIR SINE MIR -10 252 47 198 340 106 49 chr5 147297647 147298114 -55787418 + L2 LINE L2 2583 3084 -188 387 204 3 0 chr5 147299301 147299385 -55786147 + MLT1A1 LTR MaLR 1 85 -280 231 331 48 24 chr5 147300689 147300813 -55784719 - MIR SINE MIR -69 193 67 1889 284 52 85 chr5 147402720 147402778 -55682754 + L1MEc LINE L1 222 280 -6116 1986 167 3 0 chr5 147402778 147403083 -55682449 + AluJo SINE Alu 3 308 -4 1889 284 52 85 chr5 147403083 147403278 -55682254 + L1MEc LINE L1 280 480 -5916 230 73 24 0 chr5 147403278 147403319 -55682213 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 1889 284 52 85 chr5 147403319 147404483 -55681049 + L1MEc LINE L1 480 1681 -4715 2259 126 0 0 chr5 147404483 147404792 -55680740 + AluSx SINE Alu 1 309 -3 1889 284 52 85 chr5 147404792 147404902 -55680630 + L1MEc LINE L1 1681 1793 -4603 2187 118 3 16 chr5 147404902 147405216 -55680316 - AluSx SINE Alu -2 310 1 1889 284 52 85 chr5 147405216 147405514 -55680018 + L1MEc LINE L1 1793 1989 -4407 1905 157 78 11 chr5 147405782 147406152 -55679380 - MSTD LTR MaLR -1 395 1 25 31 0 0 chr5 147406157 147406189 -55679343 + AT_rich Low_complexity Low_complexity 1 32 0 497 286 98 73 chr5 147406425 147407474 -55678058 - L1MC/D LINE L1 -1328 4818 3744 912 111 0 0 chr5 147408872 147408989 -55676543 + FLAM_C SINE Alu 1 117 -26 249 33 0 0 chr5 147409006 147409036 -55676496 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 310 155 17 0 chr5 147409057 147409115 -55676417 + L2 LINE L2 3254 3312 -1 230 229 0 0 chr5 147410710 147410758 -55674774 + L2 LINE L2 3225 3272 0 382 289 10 0 chr5 147411929 147412026 -55673506 - L2 LINE L2 -12 3301 3204 183 119 34 51 chr5 147414511 147414570 -55670962 + G-rich Low_complexity Low_complexity 2 59 0 237 33 0 0 chr5 147414581 147414611 -55670921 + (CGG)n Simple_repeat Simple_repeat 2 31 0 261 0 0 0 chr5 147416061 147416090 -55669442 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 147 0 0 chr5 147416296 147416330 -55669202 + (CAG)n Simple_repeat Simple_repeat 1 34 0 357 281 104 26 chr5 147416857 147417049 -55668483 - MIR SINE MIR -16 246 40 506 295 123 11 chr5 147417168 147417541 -55667991 + L2 LINE L2 2610 3012 -301 314 277 233 31 chr5 147417556 147417715 -55667817 + MIR SINE MIR 17 207 -55 309 330 0 9 chr5 147417946 147418061 -55667471 + MIR SINE MIR 117 230 -32 196 139 0 0 chr5 147418798 147418834 -55666698 + L2 LINE L2 2225 2260 -1054 1066 36 7 7 chr5 147418922 147419062 -55666470 + (TTC)n Simple_repeat Simple_repeat 2 141 0 2730 141 0 0 chr5 147419353 147419764 -55665768 - LTR57 LTR ERVL 0 411 1 34308 122 34 10 chr5 147419764 147421151 -55664381 - LTR57-int LTR ERVL 0 5343 3990 1673 89 136 47 chr5 147421151 147421409 -55664123 + AluSx SINE Alu 3 283 -29 34308 122 34 10 chr5 147421409 147423634 -55661898 - LTR57-int LTR ERVL -1353 3990 1566 2366 78 0 0 chr5 147423634 147423917 -55661615 - AluSc SINE Alu -26 283 1 34308 122 34 10 chr5 147423917 147425522 -55660010 - LTR57-int LTR ERVL -3777 1566 1 2530 133 35 0 chr5 147425522 147425919 -55659613 - LTR57 LTR ERVL 0 411 1 2472 85 0 0 chr5 147426311 147426606 -55658926 - AluSg1 SINE Alu -14 295 1 474 267 7 27 chr5 147426609 147426755 -55658777 + LTR16C LTR ERVL 349 491 0 311 190 17 0 chr5 147527514 147527571 -55557961 - MER46C DNA MER2_type -1 337 280 278 146 18 18 chr5 147527571 147527626 -55557906 + MSTD LTR MaLR 1 55 -341 442 225 0 0 chr5 147527939 147528019 -55557513 - AluS SINE Alu -232 81 2 652 282 134 8 chr5 147528088 147528564 -55556968 - L2 LINE L2 -47 3266 2729 7752 45 22 1 chr5 147529053 147530073 -55555459 + L1P LINE L1 3275 4315 -1831 761 87 10 0 chr5 147531048 147531152 -55554380 - L1PA4 LINE L1 -1 6154 6050 210 303 26 0 chr5 147532095 147532171 -55553361 - L2 LINE L2 -2063 1251 1174 473 276 97 15 chr5 147533101 147533297 -55552235 + MLT1L LTR MaLR 168 379 -236 206 42 0 0 chr5 147534156 147534180 -55551352 + (A)n Simple_repeat Simple_repeat 1 24 0 1369 198 34 3 chr5 147534399 147534692 -55550840 + AluJo SINE Alu 1 302 -10 534 163 39 140 chr5 147534700 147534878 -55550654 + L1M3 LINE L1 5444 5603 -568 2112 113 17 0 chr5 147535679 147535981 -55549551 + AluSq SINE Alu 1 307 -6 1125 248 95 0 chr5 147535983 147536278 -55549254 - MLT1H1 LTR MaLR -1 554 232 841 202 52 0 chr5 147536590 147536763 -55548769 + MER20 DNA MER1_type 1 182 -37 303 263 95 47 chr5 147537047 147537150 -55548382 - L1M4 LINE L1 -3184 2962 2865 1771 65 22 0 chr5 147537150 147537382 -55548150 - AluY SINE Alu -14 297 61 303 263 95 47 chr5 147537382 147537552 -55547980 - L1M4 LINE L1 -3281 2865 2676 250 291 108 9 chr5 147537570 147537783 -55547749 - L1M4 LINE L1 -3546 2600 2367 638 137 57 24 chr5 147537804 147537928 -55547604 - FLAM_C SINE Alu -3 140 13 2146 102 23 0 chr5 147539057 147539361 -55546171 - AluSq SINE Alu -2 311 1 504 274 136 82 chr5 147540623 147541437 -55544095 + L2 LINE L2 2116 2973 -341 481 298 136 39 chr5 147541648 147541980 -55543552 + L3 LINE CR1 1206 1569 -8 1815 92 36 59 chr5 147542009 147542313 -55543219 + AluSp SINE Alu 2 298 -15 1184 109 17 17 chr5 147542538 147542713 -55542819 - AluSq SINE Alu -138 175 1 2096 103 17 7 chr5 147542957 147543259 -55542273 - AluSc SINE Alu -1 308 4 746 267 44 5 chr5 147543433 147543639 -55541893 + MIR SINE MIR 2 215 -47 1766 118 77 0 chr5 147544106 147544393 -55541139 + L1P LINE L1 1 309 -5837 526 305 14 0 chr5 147544554 147544695 -55540837 - AluSc SINE Alu -163 146 4 1664 124 76 3 chr5 147544706 147544996 -55540536 - L1MA5A LINE L1 -4 6293 5983 246 330 110 25 chr5 147545135 147545253 -55540279 + MIR SINE MIR 108 235 -27 303 267 44 74 chr5 147545298 147545361 -55540171 - MER94 DNA DNA 0 134 71 2271 51 24 0 chr5 147545361 147545653 -55539879 - AluY SINE Alu -12 299 1 303 267 44 74 chr5 147545653 147545724 -55539808 - MER94 DNA DNA -63 71 4 7490 27 20 0 chr5 147545974 147547260 -55538272 + L1PA3 LINE L1 4844 6155 0 3088 134 37 2 chr5 147547267 147547834 -55537698 + L1 LINE L1 4182 4768 -1378 1460 250 159 5 chr5 147548704 147549320 -55536212 + L1MEc LINE L1 431 1141 -5466 1496 146 25 76 chr5 147550169 147550484 -55535048 + AluJo SINE Alu 1 299 -13 219 335 124 0 chr5 147550614 147550775 -55534757 + L3 LINE CR1 1245 1425 -152 239 313 139 17 chr5 147551147 147551262 -55534270 - MIR3 SINE MIR -3 205 77 244 43 115 43 chr5 147551663 147551802 -55533730 + (TATAA)n Simple_repeat Simple_repeat 4 152 0 371 212 42 18 chr5 147551816 147552053 -55533479 + (TATAA)n Simple_repeat Simple_repeat 1 242 0 329 282 19 73 chr5 147552053 147552259 -55533273 + L1MEc LINE L1 2226 2420 -4006 22 114 0 0 chr5 147552259 147552294 -55533238 + AT_rich Low_complexity Low_complexity 1 35 0 784 102 23 23 chr5 147552311 147552439 -55533093 - MER11B LTR ERVK -541 695 568 1521 40 0 0 chr5 147552519 147553023 -55532509 + (G)n Simple_repeat Simple_repeat 1 504 0 504 248 110 20 chr5 147553124 147553611 -55531921 + L1M4 LINE L1 4650 5213 -933 2063 98 20 0 chr5 147553647 147553952 -55531580 + AluY SINE Alu 1 311 0 5230 78 26 10 chr5 147553954 147554757 -55530775 + L1P3 LINE L1 1 787 -5359 13313 39 23 2 chr5 147554911 147556661 -55528871 - L1P LINE L1 -2963 3183 1396 823 99 33 53 chr5 147558204 147558355 -55527177 + L1PB2 LINE L1 6000 6147 -4 1035 117 11 67 chr5 147558372 147558552 -55526980 + AluSg/x SINE Alu 127 296 -14 2147 205 103 4 chr5 147559430 147559937 -55525595 + MER119 DNA MER1_type 27 583 0 1894 122 27 7 chr5 147561588 147561882 -55523650 + AluSx SINE Alu 1 300 -12 198 268 18 0 chr5 147562018 147562074 -55523458 + MIR SINE MIR 186 242 -20 4200 121 38 5 chr5 147562115 147562776 -55522756 - L1PA15 LINE L1 -3 6162 5480 2183 96 14 0 chr5 147562783 147563076 -55522456 - AluSx SINE Alu -14 298 2 203 250 0 0 chr5 147563124 147563172 -55522360 + (CTA)n Simple_repeat Simple_repeat 3 50 0 33 0 0 0 chr5 147563408 147563441 -55522091 + AT_rich Low_complexity Low_complexity 1 33 0 2221 92 20 0 chr5 147565003 147565306 -55520226 - AluSx SINE Alu -1 311 3 369 0 0 0 chr5 147565740 147565781 -55519751 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1823 135 21 0 chr5 147565836 147566125 -55519407 - AluSx SINE Alu -16 296 2 362 213 132 22 chr5 147566549 147566685 -55518847 + MIR SINE MIR 11 161 -101 1405 213 20 0 chr5 147566686 147566987 -55518545 + AluJo SINE Alu 1 307 -5 2035 86 31 0 chr5 147567454 147567744 -55517788 - AluY SINE Alu -12 299 1 1800 134 14 7 chr5 147568324 147568608 -55516924 + AluSq SINE Alu 28 313 0 902 257 58 55 chr5 147569015 147569308 -55516224 - L1ME LINE L1 -382 5780 5489 1632 129 56 36 chr5 147569308 147569610 -55515922 - AluJb SINE Alu -4 308 1 902 257 58 55 chr5 147569610 147569770 -55515762 - L1ME LINE L1 -673 5489 5331 1968 114 17 27 chr5 147569770 147570069 -55515463 - AluSx SINE Alu -16 296 1 902 257 58 55 chr5 147570069 147570094 -55515438 - L1ME LINE L1 -831 5331 5308 7455 88 28 21 chr5 147570094 147571157 -55514375 - MER11C LTR ERVK 0 1071 1 902 257 58 55 chr5 147571157 147571306 -55514226 - L1ME LINE L1 -854 5308 5149 282 56 0 0 chr5 147571463 147571499 -55514033 + (CA)n Simple_repeat Simple_repeat 2 37 0 234 0 0 0 chr5 147572047 147572073 -55513459 + (T)n Simple_repeat Simple_repeat 1 26 0 2050 96 24 3 chr5 147572802 147573095 -55512437 + AluSq SINE Alu 1 299 -14 1987 93 21 4 chr5 147573100 147573379 -55512153 + AluSc SINE Alu 1 284 -25 305 277 113 50 chr5 147573415 147573617 -55511915 + L1M LINE L1 4756 4944 -1235 1971 108 21 0 chr5 147573617 147573904 -55511628 + AluSx SINE Alu 1 293 -19 305 277 113 50 chr5 147573904 147574330 -55511202 + L1M LINE L1 4944 5425 -754 2123 217 145 47 chr5 147574367 147575064 -55510468 - MER21B LTR ERV1 -75 788 24 244 281 175 50 chr5 147575101 147575261 -55510271 + MIR SINE MIR 12 191 -71 1421 241 124 28 chr5 147576256 147576907 -55508625 - MER21B LTR ERV1 -2 861 98 372 269 19 19 chr5 147576934 147577038 -55508494 - MER21B LTR ERV1 -754 109 6 25906 93 31 9 chr5 147577434 147577781 -55507751 - L1P LINE L1 -2097 4049 3711 2557 13 20 3 chr5 147577781 147578086 -55507446 - AluYb8 SINE Alu -8 310 1 25906 93 31 9 chr5 147578086 147581690 -55503842 - L1P LINE L1 -2435 3711 11 236 53 26 0 chr5 147581862 147581900 -55503632 + (CA)n Simple_repeat Simple_repeat 2 40 0 446 264 107 34 chr5 147582394 147582572 -55502960 + MIR SINE MIR 11 201 -61 1096 251 213 8 chr5 147582603 147583078 -55502454 + L2 LINE L2 964 1555 -1759 1528 126 67 0 chr5 147583078 147583317 -55502215 - AluSx SINE Alu -57 255 1 1096 251 213 8 chr5 147583317 147583358 -55502174 + L2 LINE L2 1555 1586 -1728 332 261 390 4 chr5 147583367 147583639 -55501893 - L2 LINE L2 -580 2734 2358 1662 217 164 140 chr5 147583645 147584039 -55501493 + L2 LINE L2 1594 1977 -1337 910 173 20 0 chr5 147584039 147584189 -55501343 + AluSg/x SINE Alu 135 287 -23 1662 217 164 140 chr5 147584189 147584824 -55500708 + L2 LINE L2 1977 2801 -513 2040 92 16 36 chr5 147584889 147585193 -55500339 - AluSc SINE Alu -11 298 1 2464 122 163 41 chr5 147585272 147585733 -55499799 + LTR44 LTR ERV1 3 519 0 1083 247 98 49 chr5 147585744 147586205 -55499327 + L2 LINE L2 2793 3270 -43 8271 156 29 8 chr5 147586205 147587674 -55497858 + MSTB-int LTR MaLR 152 1651 0 2252 163 84 5 chr5 147587674 147588066 -55497466 + MSTB LTR MaLR 2 424 -2 243 88 0 0 chr5 147588079 147588113 -55497419 + (A)n Simple_repeat Simple_repeat 1 34 0 862 166 34 6 chr5 147588121 147588296 -55497236 + FRAM SINE Alu 1 172 -4 180 111 0 0 chr5 147588318 147588345 -55497187 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 701 173 7 65 chr5 147588369 147588508 -55497024 + FLAM_C SINE Alu 2 132 -1 368 211 99 72 chr5 147588553 147588583 -55496949 + L1ME4a LINE L1 5961 5989 -132 1662 123 72 7 chr5 147588583 147588860 -55496672 + AluSq SINE Alu 1 295 -18 2055 120 17 0 chr5 147588860 147589159 -55496373 + AluSx SINE Alu 1 304 -8 368 211 99 72 chr5 147589159 147589279 -55496253 + L1ME4a LINE L1 5988 6116 -5 1987 118 17 3 chr5 147589371 147589667 -55495865 + AluSx SINE Alu 1 300 -12 201 327 174 56 chr5 147590132 147590723 -55494809 + L2 LINE L2 262 922 -2392 1463 137 51 48 chr5 147591424 147591738 -55493794 - MER44D DNA MER2_type -21 588 4 1416 175 29 48 chr5 147591738 147592049 -55493483 - MLT2B2 LTR ERVL -11 504 200 2162 69 24 3 chr5 147592058 147592346 -55493186 - AluY SINE Alu -17 294 1 557 183 29 10 chr5 147592354 147592458 -55493074 - FLAM_A SINE Alu -19 123 18 765 127 29 92 chr5 147592459 147592632 -55492900 - MLT2B2 LTR ERVL -305 210 49 371 282 121 13 chr5 147592651 147592800 -55492732 + MIR SINE MIR 40 204 -58 735 253 46 0 chr5 147593013 147593207 -55492325 + L2 LINE L2 2160 2362 -952 4980 119 52 43 chr5 147593207 147594267 -55491265 + L1MB3 LINE L1 5110 6181 -2 1231 297 66 49 chr5 147594354 147594653 -55490879 + L2 LINE L2 2432 2724 -589 1364 155 113 0 chr5 147594653 147594918 -55490614 + AluJb SINE Alu 1 295 -17 1231 297 66 49 chr5 147594918 147595479 -55490053 + L2 LINE L2 2724 3312 -1 2230 134 37 55 chr5 147596226 147596399 -55489133 - LTR32 LTR ERVL -1 470 295 2094 103 20 3 chr5 147596399 147596700 -55488832 + AluSq SINE Alu 1 306 -7 2230 134 37 55 chr5 147596700 147596982 -55488550 - LTR32 LTR ERVL -176 295 23 2081 120 27 0 chr5 147597126 147597426 -55488106 - AluSx SINE Alu -4 308 1 1129 227 135 31 chr5 147597908 147598393 -55487139 - MLT1F1 LTR MaLR 0 567 1 1781 153 17 3 chr5 147598582 147598870 -55486662 + AluJb SINE Alu 1 292 -20 703 118 50 243 chr5 147599629 147599691 -55485841 + MER33 DNA MER1_type 2 74 -2511 1638 158 20 34 chr5 147599691 147600012 -55485520 + AluJo SINE Alu 1 312 0 703 118 50 243 chr5 147600012 147600280 -55485252 + MER33 DNA MER1_type 74 245 -2340 492 121 298 0 chr5 147600280 147600421 -55485111 - MER53 DNA DNA -3 186 4 703 118 50 243 chr5 147600421 147600489 -55485043 + MER33 DNA MER1_type 245 324 0 212 279 0 0 chr5 147601062 147601123 -55484409 + (CCCCG)n Simple_repeat Simple_repeat 2 62 0 1590 90 68 103 chr5 147602320 147602631 -55482901 - AluSc SINE Alu -9 300 1 180 250 23 0 chr5 147603013 147603057 -55482475 - L2 LINE L2 -216 3056 3012 2197 110 13 7 chr5 147604135 147604445 -55481087 + AluSx SINE Alu 1 312 0 2668 150 139 9 chr5 147604468 147605009 -55480523 + LTR36 LTR ERV1 1 611 0 284 0 28 0 chr5 147605450 147605486 -55480046 + (TG)n Simple_repeat Simple_repeat 1 37 0 1998 116 21 0 chr5 147605884 147606169 -55479363 - AluSx SINE Alu -19 293 3 1811 117 18 7 chr5 147606835 147607109 -55478423 - AluSx SINE Alu -11 301 25 446 240 143 0 chr5 147607176 147607330 -55478202 + MIR SINE MIR 87 262 0 2220 93 19 10 chr5 147607417 147607727 -55477805 - AluSq SINE Alu 0 313 1 236 385 46 0 chr5 147608217 147608347 -55477185 + MER5A DNA MER1_type 50 185 -4 510 195 98 32 chr5 147608547 147608670 -55476862 + MIR SINE MIR 10 140 -122 187 171 0 29 chr5 147608694 147608729 -55476803 + L2 LINE L2 3258 3291 -22 1460 160 50 32 chr5 147608907 147609188 -55476344 + AluJb SINE Alu 1 286 -26 236 245 0 43 chr5 147609222 147609316 -55476216 + L1MC4 LINE L1 6614 6703 -1339 252 0 0 0 chr5 147609530 147609558 -55475974 + (TTG)n Simple_repeat Simple_repeat 2 29 0 184 300 143 0 chr5 147610098 147610168 -55475364 + L2 LINE L2 3176 3255 -17 289 228 152 11 chr5 147610473 147610565 -55474967 - MIR SINE MIR -6 256 152 * 319 281 10 42 chr5 147610556 147610652 -55474880 + L2 LINE L2 3217 3309 -4 30 0 0 0 chr5 147610834 147610864 -55474668 + AT_rich Low_complexity Low_complexity 1 30 0 1874 147 48 17 chr5 147611591 147611858 -55473674 + MER47A DNA MER2_type 1 283 -2040 2410 161 55 4 chr5 147611858 147612317 -55473215 - MER66B LTR ERV1 -1 485 4 1874 147 48 17 chr5 147612317 147612404 -55473128 + MER47A DNA MER2_type 283 366 0 728 151 204 0 chr5 147612646 147612818 -55472714 + MER3 DNA MER1_type 3 209 0 1617 167 32 7 chr5 147613848 147614130 -55471402 - AluJo SINE Alu -21 291 3 1867 151 16 13 chr5 147616048 147616371 -55469161 - AluSx SINE Alu 0 312 1 236 316 48 53 chr5 147617964 147618071 -55467461 - MIR SINE MIR -4 258 151 2012 110 27 0 chr5 147618071 147618372 -55467160 + AluSq SINE Alu 1 309 -4 236 316 48 53 chr5 147618372 147618473 -55467059 - MIR SINE MIR -111 151 51 1831 108 19 0 chr5 147618618 147618877 -55466655 - AluSq SINE Alu 0 313 50 253 294 98 22 chr5 147619564 147619656 -55465876 + MIR SINE MIR 164 262 0 2222 149 151 6 chr5 147620187 147620696 -55464836 + L1MB7 LINE L1 5567 6149 -35 241 182 0 0 chr5 147620701 147620745 -55464787 + MLT1B LTR MaLR 1 44 -330 928 176 25 5 chr5 147620855 147621049 -55464483 + MLT1B LTR MaLR 192 396 0 572 223 134 6 chr5 147624611 147624768 -55460764 - MER5B DNA MER1_type -1 177 1 220 242 48 0 chr5 147625832 147625894 -55459638 + MIR SINE MIR 86 150 -58 180 247 96 14 chr5 147627485 147627558 -55457974 - MIR SINE MIR -118 144 66 780 160 135 6 chr5 147627974 147628130 -55457402 - MER45A DNA AcHobo -2 176 1 189 107 0 0 chr5 147628787 147628815 -55456717 + (CATA)n Simple_repeat Simple_repeat 3 30 0 353 232 95 11 chr5 147629230 147629325 -55456207 - MIR SINE MIR -94 168 66 306 0 0 0 chr5 147629325 147629359 -55456173 + (A)n Simple_repeat Simple_repeat 1 34 0 281 265 204 0 chr5 147629369 147629467 -55456065 - L2 LINE L2 -5 3267 3150 277 167 62 0 chr5 147629663 147629711 -55455821 + L2 LINE L2 3259 3309 -4 422 249 150 6 chr5 147629954 147630127 -55455405 + MIR SINE MIR 59 256 -6 198 71 0 0 chr5 147630522 147630550 -55454982 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3547 150 36 31 chr5 147630574 147630953 -55454579 - L1MB7 LINE L1 -9 6986 6610 2028 119 20 0 chr5 147630953 147631248 -55454284 + AluSx SINE Alu 1 301 -11 279 0 0 0 chr5 147631249 147631280 -55454252 + (TA)n Simple_repeat Simple_repeat 1 31 0 3547 150 36 31 chr5 147631280 147631705 -55453827 - L1MB7 LINE L1 -384 6611 6176 570 217 39 39 chr5 147631679 147631859 -55453673 - L1MB7 LINE L1 -1555 5402 5223 * 2153 240 54 43 chr5 147631845 147632547 -55452985 - L1MB7 LINE L1 -4629 2330 1612 722 202 16 0 chr5 147632547 147632676 -55452856 - FLAM_A SINE Alu -2 131 1 2153 240 54 43 chr5 147632676 147632987 -55452545 - L1MB7 LINE L1 -5347 1612 1306 2021 131 17 0 chr5 147632997 147633288 -55452244 - AluSx SINE Alu -11 301 6 3730 234 60 38 chr5 147633290 147634358 -55451174 - L1MB7 LINE L1 -5734 1125 34 619 157 66 61 chr5 147634389 147634587 -55450945 - L1M4 LINE L1 -751 5395 5197 3052 207 63 11 chr5 147636900 147637769 -55447763 + L1MC4a LINE L1 6893 7806 -2 1875 71 34 11 chr5 147637783 147637905 -55447627 + AluSq SINE Alu 2 120 -193 212 0 36 0 chr5 147637905 147637933 -55447599 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1875 71 34 11 chr5 147637933 147638076 -55447456 + AluSq SINE Alu 120 273 -40 309 51 0 0 chr5 147638095 147638134 -55447398 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 210 210 32 16 chr5 147638818 147638880 -55446652 - MIR SINE MIR -63 199 137 3392 150 62 54 chr5 147638883 147639540 -55445992 - L1MB2 LINE L1 -7 6164 5499 1465 146 24 16 chr5 147639540 147639793 -55445739 - AluJo SINE Alu -23 289 35 3392 150 62 54 chr5 147639793 147639907 -55445625 - L1MB2 LINE L1 -672 5499 5387 325 211 94 94 chr5 147639916 147640044 -55445488 - MIR SINE MIR -114 148 21 2106 99 17 0 chr5 147640130 147640441 -55445091 - AluSx SINE Alu 0 312 1 240 288 224 39 chr5 147640917 147641198 -55444334 + L2 LINE L2 2550 2882 -432 210 284 222 0 chr5 147641325 147641406 -55444126 - MIR SINE MIR -149 113 15 1171 175 21 17 chr5 147644659 147644899 -55440633 - MER96B DNA MER1_type? -170 247 7 861 343 56 52 chr5 147645057 147645503 -55440029 - HERVL LTR ERVL -1794 3860 3408 1629 126 78 31 chr5 147645503 147645797 -55439735 - AluJb SINE Alu -4 308 1 861 343 56 52 chr5 147645797 147646196 -55439336 - HERVL LTR ERVL -2246 3408 3012 241 217 14 0 chr5 147646298 147646367 -55439165 + L1MC5 LINE L1 7763 7832 -129 657 307 48 22 chr5 147646480 147646943 -55438589 - HERVL LTR ERVL -2901 2863 2130 830 318 52 26 chr5 147647013 147647397 -55438135 - HERVL LTR ERVL -2963 2033 1640 2074 61 21 0 chr5 147647518 147647797 -55437735 - AluY SINE Alu -26 285 1 407 337 69 30 chr5 147647896 147648199 -55437333 - HERVL LTR ERVL -3714 1282 968 467 313 75 60 chr5 147648244 147648644 -55436888 - HERVL LTR ERVL -4126 870 465 448 248 16 16 chr5 147648683 147648812 -55436720 - LTR16C LTR ERVL -14 477 349 2066 83 21 0 chr5 147648815 147649104 -55436428 + AluSg1 SINE Alu 1 295 -14 348 276 27 98 chr5 147749499 147749733 -55335799 - L1ME LINE L1 -5464 606 384 330 156 0 0 chr5 147749987 147750051 -55335481 + GA-rich Low_complexity Low_complexity 1 64 0 573 65 33 11 chr5 147750332 147750424 -55335108 - L1MB2 LINE L1 -7 6164 6071 389 254 112 22 chr5 147750856 147750990 -55334542 + L2 LINE L2 3168 3313 0 294 215 1 78 chr5 147751261 147751360 -55334172 + L1M2 LINE L1 5458 5550 -614 1358 95 0 6 chr5 147751700 147751869 -55333663 - AluSx SINE Alu -144 168 1 2116 83 83 0 chr5 147751879 147752157 -55333375 - AluSq SINE Alu -12 301 1 352 182 0 15 chr5 147754124 147754190 -55331342 + MER5B DNA MER1_type 1 65 -113 2223 231 104 30 chr5 147754190 147754901 -55330631 + L1ME3A LINE L1 5329 6092 -78 492 225 9 18 chr5 147755007 147755094 -55330438 - L1ME LINE L1 -517 5649 5562 2067 171 3 0 chr5 147755094 147755440 -55330092 - MER7A DNA MER2_type -1 345 1 492 225 9 18 chr5 147755440 147755463 -55330069 - L1ME LINE L1 -604 5562 5540 844 183 0 0 chr5 147755463 147755600 -55329932 + FLAM_C SINE Alu 1 137 -6 1347 213 3 45 chr5 147755605 147755862 -55329670 - L1ME LINE L1 -614 5552 5308 1953 136 7 4 chr5 147755862 147756169 -55329363 + AluSx SINE Alu 5 312 0 1347 213 3 45 chr5 147756169 147756257 -55329275 - L1ME LINE L1 -858 5308 5218 192 198 209 44 chr5 147756478 147756569 -55328963 - MIR3 SINE MIR -25 183 78 352 197 73 62 chr5 147756685 147756714 -55328818 - L1ME4a LINE L1 0 6121 6094 1738 159 27 40 chr5 147756714 147757015 -55328517 + AluJb SINE Alu 1 297 -15 352 197 73 62 chr5 147757015 147757163 -55328369 - L1ME4a LINE L1 -27 6094 5942 216 0 0 0 chr5 147757273 147757297 -55328235 + (A)n Simple_repeat Simple_repeat 1 24 0 2467 206 26 35 chr5 147759102 147759600 -55325932 + L1M4c LINE L1 1265 1757 -4627 1521 226 68 64 chr5 147759600 147760074 -55325458 + MLT2B1 LTR ERVL 1 479 -41 254 95 24 0 chr5 147760074 147760116 -55325416 + (TA)n Simple_repeat Simple_repeat 2 44 0 1521 226 68 64 chr5 147760116 147760159 -55325373 + MLT2B1 LTR ERVL 479 520 0 2467 206 26 35 chr5 147760159 147760314 -55325218 + L1M4c LINE L1 1757 1912 -4472 2236 113 3 25 chr5 147760380 147760699 -55324833 - AluSx SINE Alu 0 312 1 10722 27 0 0 chr5 147760852 147762174 -55323358 - L1P LINE L1 -1588 4558 3237 1275 255 93 19 chr5 147762865 147763327 -55322205 - LTR33 LTR ERVL 0 521 26 1948 151 25 0 chr5 147763825 147764109 -55321423 + AluJo SINE Alu 1 291 -21 2008 136 0 0 chr5 147764117 147764389 -55321143 + AluSx SINE Alu 1 272 -40 1210 284 82 38 chr5 147766877 147767455 -55318077 - L2 LINE L2 -7 3306 2685 601 203 57 0 chr5 147767455 147767578 -55317954 - FLAM_A SINE Alu -3 130 1 1210 284 82 38 chr5 147767578 147767717 -55317815 - L2 LINE L2 -628 2685 2554 2293 229 81 69 chr5 147767892 147767968 -55317564 + L1MDa LINE L1 1262 1336 -5204 1640 196 22 0 chr5 147767968 147768278 -55317254 + AluJb SINE Alu 1 316 0 2293 229 81 69 chr5 147768278 147769386 -55316146 + L1MDa LINE L1 1336 2558 -3982 2609 220 75 91 chr5 147769392 147769539 -55315993 + L1M4 LINE L1 6 154 -6388 2205 134 0 0 chr5 147769539 147769838 -55315694 - AluSx SINE Alu -13 299 1 2609 220 75 91 chr5 147769838 147770793 -55314739 + L1M4 LINE L1 154 1091 -5451 4155 229 46 13 chr5 147770893 147771302 -55314230 + L1M4 LINE L1 2618 3012 -3632 2040 162 0 0 chr5 147771302 147771599 -55313933 + AluSx SINE Alu 1 297 -15 4155 229 46 13 chr5 147771599 147771843 -55313689 + L1M4 LINE L1 3012 3247 -3397 2386 108 3 0 chr5 147771843 147772150 -55313382 + AluSq SINE Alu 1 308 -5 4155 229 46 13 chr5 147772150 147772942 -55312590 + L1M4 LINE L1 3247 4347 -2297 23149 42 43 2 chr5 147772946 147775941 -55309591 + L1P LINE L1 1 3118 -3028 186 302 0 0 chr5 147776069 147776122 -55309410 + L2 LINE L2 3005 3057 -256 201 277 59 84 chr5 147776220 147776339 -55309193 - L2 LINE L2 -17 3255 3140 380 161 12 0 chr5 147777225 147777306 -55308226 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 21 36 0 0 chr5 147779110 147779138 -55306394 + GC_rich Low_complexity Low_complexity 1 28 0 360 238 38 9 chr5 147779649 147779754 -55305778 - MIR SINE MIR -106 156 49 1957 157 11 8 chr5 147779996 147780353 -55305179 + L1MB4 LINE L1 5823 6180 0 314 289 30 7 chr5 147780353 147780488 -55305044 - L1ME4a LINE L1 -20 6101 5964 216 0 0 0 chr5 147780499 147780523 -55305009 + (TG)n Simple_repeat Simple_repeat 2 25 0 244 212 15 30 chr5 147780570 147780636 -55304896 - L3 LINE CR1 -259 1318 1254 450 260 26 26 chr5 147783126 147783280 -55302252 + L2 LINE L2 3158 3311 -2 2457 98 0 0 chr5 147783655 147783962 -55301570 - AluSp SINE Alu -6 307 1 376 270 139 7 chr5 147784134 147784271 -55301261 + MIR SINE MIR 2 156 -106 597 296 59 18 chr5 147785460 147785680 -55299852 - MIR SINE MIR -32 230 2 301 231 37 82 chr5 147785686 147785820 -55299712 + MIR SINE MIR 102 229 -33 812 56 19 0 chr5 147786221 147786329 -55299203 + HY1 scRNA scRNA 1 110 -2 2577 81 0 0 chr5 147786329 147786639 -55298893 - AluY SINE Alu 0 311 2 24 32 0 0 chr5 147786647 147786678 -55298854 + AT_rich Low_complexity Low_complexity 1 31 0 293 314 142 25 chr5 147786678 147786996 -55298536 + L1ME3A LINE L1 5595 5949 -221 1841 160 12 81 chr5 147787144 147787562 -55297970 + MLT1D LTR MaLR 117 505 0 203 209 23 0 chr5 147787823 147787866 -55297666 + MER91C DNA MER1_type 33 76 -64 219 318 91 15 chr5 147789430 147789562 -55295970 - L2 LINE L2 -18 3254 3113 561 210 35 7 chr5 147789701 147789844 -55295688 + MIR SINE MIR 20 166 -96 1904 157 0 3 chr5 147789994 147790305 -55295227 - AluJo SINE Alu 0 310 1 1768 166 42 79 chr5 147790307 147790764 -55294768 - MLT1D LTR MaLR -65 440 1 794 124 0 0 chr5 147791451 147791564 -55293968 - MER81 DNA DNA -1 113 1 181 128 0 106 chr5 147793739 147793786 -55291746 + L3b LINE CR1 1299 1340 -243 2272 107 3 0 chr5 147793905 147794195 -55291337 - AluSq SINE Alu -22 291 1 198 0 0 0 chr5 147794812 147794834 -55290698 + (CA)n Simple_repeat Simple_repeat 2 23 0 237 219 16 16 chr5 147797477 147797541 -55287991 + MIR SINE MIR 82 145 -63 781 313 53 4 chr5 147797631 147797877 -55287655 + MIR SINE MIR 5 262 0 30 100 0 0 chr5 147799331 147799431 -55286101 + GC_rich Low_complexity Low_complexity 1 100 0 22 56 0 0 chr5 147799813 147799849 -55285683 + GC_rich Low_complexity Low_complexity 1 36 0 30 45 0 0 chr5 147799945 147799989 -55285543 + GC_rich Low_complexity Low_complexity 1 44 0 595 281 71 0 chr5 147801584 147801794 -55283738 - L1ME4a LINE L1 -256 5865 5641 512 234 48 0 chr5 147802421 147802545 -55282987 + MIR SINE MIR 21 150 -112 798 328 67 25 chr5 147803758 147804264 -55281268 - L1MC4a LINE L1 -228 5938 5414 2241 105 0 7 chr5 147804483 147804789 -55280743 + AluSx SINE Alu 1 304 -8 771 221 96 15 chr5 147804807 147805006 -55280526 - MER58A DNA MER1_type -9 215 1 2234 109 0 10 chr5 147806245 147806556 -55278976 - AluSx SINE Alu -4 308 1 312 188 176 0 chr5 147807820 147807905 -55277627 + L1MB8 LINE L1 6063 6162 -16 2430 93 0 0 chr5 147808047 147808359 -55277173 + AluSx SINE Alu 1 312 0 2351 105 0 0 chr5 147809106 147809401 -55276131 - AluSg SINE Alu -15 295 1 1699 185 34 0 chr5 147811854 147812151 -55273381 - AluJo SINE Alu -5 307 1 3427 181 32 30 chr5 147812457 147813054 -55272478 + L1MB7 LINE L1 5457 6059 -125 1789 78 161 0 chr5 147813054 147813324 -55272208 + AluY SINE Alu 2 310 0 3427 181 32 30 chr5 147813324 147813432 -55272100 + L1MB7 LINE L1 6059 6165 -19 412 248 16 25 chr5 147814161 147814282 -55271250 - L2 LINE L2 -1 3312 3193 734 177 35 50 chr5 147814888 147815029 -55270503 + FLAM_A SINE Alu 4 142 0 25 51 0 0 chr5 147815519 147815558 -55269974 + AT_rich Low_complexity Low_complexity 1 39 0 215 91 0 23 chr5 147815792 147815836 -55269696 + (TTAA)n Simple_repeat Simple_repeat 3 45 0 952 183 11 6 chr5 147816398 147816573 -55268959 + AluJb SINE Alu 137 312 0 56 0 0 0 chr5 147816626 147816682 -55268850 + AT_rich Low_complexity Low_complexity 1 56 0 349 165 0 25 chr5 147816703 147816782 -55268750 - L1M4 LINE L1 -2289 3857 3781 836 191 0 8 chr5 147816897 147817028 -55268504 + FLAM_A SINE Alu 1 130 -3 565 255 87 20 chr5 147817105 147817301 -55268231 + MIR SINE MIR 54 262 0 282 130 56 19 chr5 147817406 147817460 -55268072 + L2 LINE L2 3254 3309 -4 2314 95 0 0 chr5 147817835 147818129 -55267403 + AluSg SINE Alu 1 294 -16 354 274 32 21 chr5 147819725 147819820 -55265712 - L2 LINE L2 -40 3232 3137 2305 88 0 7 chr5 147820759 147821055 -55264477 + AluSc SINE Alu 1 294 -15 207 0 0 0 chr5 147821341 147821364 -55264168 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 252 0 0 0 chr5 147821553 147821581 -55263951 + (CA)n Simple_repeat Simple_repeat 2 29 0 2041 104 7 14 chr5 147822291 147822578 -55262954 + AluSg SINE Alu 1 285 -25 2321 94 10 0 chr5 147823957 147824256 -55261276 - AluSq SINE Alu -11 302 1 1392 148 5 9 chr5 147824599 147824816 -55260716 - AluJo SINE Alu -12 300 85 1530 149 89 3 chr5 147824864 147825146 -55260386 + AluSx SINE Alu 1 306 -6 27 0 0 0 chr5 147826066 147826093 -55259439 + AT_rich Low_complexity Low_complexity 1 27 0 1034 91 0 0 chr5 147831778 147831910 -55253622 - AluSg/x SINE Alu -8 302 171 21 0 0 0 chr5 147835305 147835326 -55250206 + AT_rich Low_complexity Low_complexity 1 21 0 194 329 24 0 chr5 147835484 147835566 -55249966 + MIR3 SINE MIR 87 170 -38 323 283 94 29 chr5 147836836 147836974 -55248558 - MIR SINE MIR -69 193 47 2175 102 28 0 chr5 147837032 147837315 -55248217 - AluSx SINE Alu -21 291 1 2304 87 0 42 chr5 147837387 147837698 -55247834 + AluSc SINE Alu 1 298 -11 327 185 92 0 chr5 147837990 147838055 -55247477 - MER58 DNA MER1_type 0 2420 2350 1019 133 223 0 chr5 147838182 147838370 -55247162 - MER30 DNA MER1_type 0 230 1 472 225 258 0 chr5 147838370 147838548 -55246984 + MIR SINE MIR 2 225 -37 2101 110 7 10 chr5 147838549 147838850 -55246682 + AluSx SINE Alu 1 300 -12 315 191 32 0 chr5 147839425 147839488 -55246044 - L1MB7 LINE L1 -55 6129 6065 316 262 48 0 chr5 147839571 147839674 -55245858 + MIR SINE MIR 85 192 -70 1711 69 0 0 chr5 147843186 147843388 -55242144 + AluSc SINE Alu 94 295 -14 1956 148 17 3 chr5 147843704 147844002 -55241530 + AluJb SINE Alu 1 302 -10 3280 132 100 107 chr5 147846382 147847370 -55238162 - L1MB8 LINE L1 -2 6176 5193 696 121 81 0 chr5 147847371 147847520 -55238012 - L1MB4 LINE L1 -1 6179 6019 21 0 0 0 chr5 147847526 147847547 -55237985 + AT_rich Low_complexity Low_complexity 1 21 0 1382 137 5 0 chr5 147847596 147847800 -55237732 + AluSg/x SINE Alu 83 287 -23 2126 149 91 142 chr5 147847825 147848370 -55237162 - L1MB4 LINE L1 -196 5984 5413 227 233 0 0 chr5 147848370 147848413 -55237119 - MER41B LTR ERV1 -114 521 479 2126 149 91 142 chr5 147848413 147848517 -55237015 - L1MB4 LINE L1 -767 5413 5326 1988 132 0 0 chr5 147848517 147848790 -55236742 - AluSx SINE Alu -39 273 1 2126 149 91 142 chr5 147848790 147848824 -55236708 - L1MB4 LINE L1 -854 5326 5292 180 0 0 0 chr5 147848840 147848860 -55236672 + (TG)n Simple_repeat Simple_repeat 1 20 0 727 124 8 85 chr5 147848872 147848906 -55236626 - AluJb SINE Alu -192 120 85 2009 142 0 10 chr5 147848906 147849201 -55236331 - AluY SINE Alu -19 292 1 727 124 8 85 chr5 147849201 147849295 -55236237 - AluJb SINE Alu -227 85 2 1284 197 44 55 chr5 147849297 147849658 -55235874 - L1MB4 LINE L1 -945 5201 4845 1718 154 14 35 chr5 147849658 147849944 -55235588 + AluJo SINE Alu 1 280 -32 468 51 0 0 chr5 147849945 147850004 -55235528 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1817 139 38 14 chr5 147850007 147850294 -55235238 - AluSx SINE Alu -14 298 5 830 172 41 0 chr5 147850302 147850471 -55235061 - L1MB4 LINE L1 -1490 4656 4481 1800 158 7 3 chr5 147850474 147850765 -55234767 - AluJb SINE Alu 0 312 21 361 151 0 0 chr5 147850765 147850818 -55234714 + Alu SINE Alu 4 56 -246 1460 118 0 10 chr5 147850818 147851021 -55234511 + AluSg/x SINE Alu 98 298 -12 1455 209 6 32 chr5 147851087 147851398 -55234134 + AluJb SINE Alu 1 303 -9 2028 128 7 4 chr5 147851410 147851691 -55233841 + AluSp SINE Alu 1 282 -31 32 75 0 0 chr5 147852541 147852608 -55232924 + AT_rich Low_complexity Low_complexity 1 67 0 22 0 0 0 chr5 147853060 147853082 -55232450 + AT_rich Low_complexity Low_complexity 1 22 0 294 208 0 0 chr5 147853298 147853351 -55232181 - L2 LINE L2 0 3313 3261 623 132 116 0 chr5 147853644 147853765 -55231767 - L1MD1 LINE L1 -25 6217 6083 342 266 91 56 chr5 147853932 147854075 -55231457 - L2 LINE L2 -1 3312 3165 234 311 33 60 chr5 147854085 147854268 -55231264 - L2 LINE L2 -361 2953 2776 2017 153 0 0 chr5 147854269 147854569 -55230963 - AluJb SINE Alu -12 300 1 2173 149 3 0 chr5 147854581 147854890 -55230642 - AluSx SINE Alu -2 310 1 1786 113 0 8 chr5 147854973 147855212 -55230320 - AluSg/x SINE Alu 0 310 74 528 233 54 0 chr5 147855221 147855350 -55230182 - AluJb SINE Alu -62 250 115 1644 184 39 0 chr5 147855361 147855644 -55229888 + AluJo SINE Alu 1 294 -18 362 339 12 12 chr5 147855644 147855809 -55229723 - L2 LINE L2 -620 2694 2530 526 296 184 60 chr5 147856004 147856797 -55228735 - HAL1 LINE L1 -1600 907 17 757 211 206 9 chr5 147857565 147857783 -55227749 + MIR SINE MIR 2 262 0 599 197 8 0 chr5 147857793 147857919 -55227613 + MER33 DNA MER1_type 1 114 -97 715 78 0 0 chr5 147858164 147858254 -55227278 - 5S rRNA rRNA -31 90 1 2089 104 13 46 chr5 147858537 147858870 -55226662 - AluSg SINE Alu 0 310 1 1750 162 0 0 chr5 147858929 147859188 -55226344 + AluJb SINE Alu 35 293 -19 479 285 80 7 chr5 147859210 147859347 -55226185 + MIR SINE MIR 23 169 -93 269 148 26 20 chr5 147859381 147859611 -55225921 + AluJo SINE Alu 1 294 -8 24 53 0 0 chr5 147859665 147859703 -55225829 + AT_rich Low_complexity Low_complexity 1 38 0 2053 157 0 3 chr5 147859713 147860018 -55225514 - AluSx SINE Alu -8 304 1 1986 147 0 7 chr5 147860049 147860341 -55225191 - AluSx SINE Alu -22 290 1 2104 121 17 10 chr5 147860342 147860639 -55224893 - AluSx SINE Alu -13 299 1 1969 161 0 19 chr5 147860802 147861113 -55224419 - AluJo SINE Alu -7 305 1 324 64 0 0 chr5 147861153 147861200 -55224332 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 570 246 0 9 chr5 147861208 147861322 -55224210 - FLAM_A SINE Alu -17 116 4 2360 92 0 3 chr5 147861836 147862141 -55223391 - AluSq SINE Alu -9 304 1 1912 153 35 0 chr5 147862450 147862737 -55222795 + AluSx SINE Alu 1 297 -15 303 214 0 0 chr5 147862764 147862834 -55222698 + (TG)n Simple_repeat Simple_repeat 2 71 0 693 92 31 0 chr5 147862846 147862944 -55222588 + AluSp/q SINE Alu 193 293 -20 2065 119 3 7 chr5 147862949 147863242 -55222290 + AluSq SINE Alu 1 292 -21 814 172 0 0 chr5 147863286 147863414 -55222118 - FLAM_C SINE Alu -5 128 1 3064 164 106 22 chr5 147863466 147864184 -55221348 - L1MB7 LINE L1 -127 6057 5280 2333 82 3 0 chr5 147864263 147864586 -55220946 - AluSp SINE Alu 0 324 1 2226 122 7 0 chr5 147864722 147865026 -55220506 + AluSq SINE Alu 1 306 -7 1650 136 37 4 chr5 147865271 147865514 -55220018 + AluSx SINE Alu 48 298 -14 431 52 52 0 chr5 147865524 147865582 -55219950 + U7 snRNA snRNA 2 62 -1 317 313 78 30 chr5 147866076 147866242 -55219290 - L2 LINE L2 -85 3187 3014 430 257 0 9 chr5 147866848 147866961 -55218571 - LTR67 LTR ERVL -14 543 432 433 313 175 23 chr5 147867392 147867609 -55217923 - MIR SINE MIR 0 262 13 2178 68 75 4 chr5 147869209 147869489 -55216043 + AluY SINE Alu 1 300 -11 454 254 75 35 chr5 147869595 147869619 -55215913 + L1MC4a LINE L1 5255 5277 -2531 1709 149 73 17 chr5 147869619 147869907 -55215625 - AluJo SINE Alu -8 304 1 454 254 75 35 chr5 147869907 147870110 -55215422 + L1MC4a LINE L1 5277 5491 -2317 791 157 16 0 chr5 147870352 147870473 -55215059 + FLAM_A SINE Alu 1 123 -10 281 238 139 25 chr5 147870477 147870499 -55215033 + L1MC4a LINE L1 5482 5500 -621 2655 114 48 10 chr5 147870499 147870911 -55214621 - MSTA LTR MaLR 0 428 1 281 238 139 25 chr5 147870911 147871010 -55214522 + L1MC4a LINE L1 5500 5617 -504 634 237 82 109 chr5 147871014 147871572 -55213960 - MLT1H LTR MaLR -5 544 2 446 263 42 53 chr5 147871573 147871858 -55213674 + L1MC4a LINE L1 5609 5890 -1918 2163 125 3 0 chr5 147871860 147872155 -55213377 + AluSx SINE Alu 1 296 -16 800 171 23 0 chr5 147872155 147872284 -55213248 - AluJo/FLAM SINE Alu -180 132 1 645 302 73 0 chr5 147872573 147872778 -55212754 + MIR SINE MIR 23 242 -20 3320 174 33 13 chr5 147873252 147873854 -55211678 - MER90 LTR ERV1 0 614 1 1969 138 7 10 chr5 147874220 147874517 -55211015 - AluSx SINE Alu -16 296 1 2212 102 7 3 chr5 147874630 147874935 -55210597 + AluSx SINE Alu 1 306 -6 291 281 33 105 chr5 147879162 147879181 -55206351 - L2 LINE L2 -7 3306 3287 2325 68 0 4 chr5 147879181 147879496 -55206036 - AluSc SINE Alu 0 314 1 291 281 33 105 chr5 147879496 147879628 -55205904 - L2 LINE L2 -26 3287 3165 476 273 169 6 chr5 147879959 147880131 -55205401 + MIR SINE MIR 34 233 -29 27 0 0 0 chr5 147880889 147880916 -55204616 + GC_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 147880934 147880955 -55204577 + GC_rich Low_complexity Low_complexity 1 21 0 2775 35 0 0 chr5 147884168 147884479 -55201053 + AluY SINE Alu 1 311 0 249 336 42 8 chr5 147884730 147884849 -55200683 - LTR67 LTR ERVL -10 547 425 928 111 0 59 chr5 147885940 147886093 -55199439 + AluJb SINE Alu 167 310 -2 186 71 0 0 chr5 147886878 147886906 -55198626 + (A)n Simple_repeat Simple_repeat 1 28 0 1407 95 29 121 chr5 147887769 147888042 -55197490 + AluSx SINE Alu 20 267 -45 2367 110 0 3 chr5 147888244 147888554 -55196978 + AluSx SINE Alu 1 309 -3 191 387 94 0 chr5 147888723 147888829 -55196703 - MIR SINE MIR -57 151 36 668 206 102 24 chr5 147888840 147889043 -55196489 + MIR SINE MIR 16 240 -22 304 231 68 26 chr5 147890279 147890396 -55195136 - MIR3 SINE MIR -1 207 86 23 33 0 0 chr5 147893047 147893077 -55192455 + GC_rich Low_complexity Low_complexity 1 30 0 34 55 0 0 chr5 147893395 147893450 -55192082 + GC_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 147893571 147893593 -55191939 + GC_rich Low_complexity Low_complexity 1 22 0 307 257 55 104 chr5 147893902 147894085 -55191447 - L1ME4a LINE L1 -4 6117 5944 648 294 100 47 chr5 147894128 147894488 -55191044 - L2 LINE L2 -1 3312 2934 2149 101 7 7 chr5 147894516 147894814 -55190718 + AluSx SINE Alu 1 298 -14 735 280 98 21 chr5 147894845 147895081 -55190451 + MIR SINE MIR 2 255 -7 473 235 118 46 chr5 147895217 147895455 -55190077 - L1ME4a LINE L1 -239 5882 5628 490 179 265 0 chr5 147895484 147895601 -55189931 - AluJo SINE Alu -163 149 2 2302 103 3 0 chr5 147895620 147895912 -55189620 - AluSq SINE Alu -20 293 1 265 333 121 18 chr5 147896006 147896171 -55189361 - L2 LINE L2 -4 3309 3128 2154 90 0 4 chr5 147896305 147896572 -55188960 + AluY SINE Alu 1 266 -45 4131 107 41 56 chr5 147897401 147898102 -55187430 - LTR8 LTR ERV1 0 691 1 222 282 24 35 chr5 147898189 147898274 -55187258 - MIR SINE MIR -87 121 38 28 0 0 0 chr5 147898734 147898762 -55186770 + AT_rich Low_complexity Low_complexity 1 28 0 2066 130 27 0 chr5 147898789 147899081 -55186451 - AluSq SINE Alu -13 300 1 2308 87 7 3 chr5 147899775 147900074 -55185458 - AluSc SINE Alu -9 300 1 225 154 0 0 chr5 147900134 147900173 -55185359 + T-rich Low_complexity Low_complexity 1 39 0 272 103 0 0 chr5 147900175 147900214 -55185318 - LTR54 LTR ERV1 -70 440 402 540 219 9 0 chr5 147900296 147900437 -55185095 - FLAM_A SINE Alu 0 142 1 13941 47 8 1 chr5 147900460 147903052 -55182480 - L1PA6 LINE L1 0 6154 3551 4041 73 15 0 chr5 147903052 147903637 -55181895 + L1P LINE L1 2748 3341 -2805 2330 112 28 8 chr5 147903736 147904093 -55181439 - THE1B LTR MaLR 0 364 1 681 200 0 8 chr5 147904251 147904381 -55181151 - FLAM_A SINE Alu -4 129 1 629 221 143 0 chr5 147905544 147905698 -55179834 + MLT1D LTR MaLR 320 495 -10 1288 212 134 45 chr5 147906315 147906502 -55179030 + MLT1D LTR MaLR 1 170 -335 2417 104 0 3 chr5 147906502 147906809 -55178723 + AluSx SINE Alu 1 306 -6 1288 212 134 45 chr5 147906809 147907084 -55178448 + MLT1D LTR MaLR 170 504 -1 2363 99 0 7 chr5 147907380 147907684 -55177848 - AluSq SINE Alu -11 302 1 254 200 77 15 chr5 147907820 147907885 -55177647 - MER117 DNA MER1_type -112 85 17 2448 107 0 0 chr5 147908036 147908344 -55177188 + AluSx SINE Alu 5 312 0 265 293 158 32 chr5 147908388 147908641 -55176891 - L2 LINE L2 -180 3092 2808 231 307 125 45 chr5 147908666 147909067 -55176465 + L2 LINE L2 2331 2763 -551 289 242 76 61 chr5 147909154 147909286 -55176246 - HAL1 LINE L1 -87 2420 2287 1607 181 27 7 chr5 147909321 147909619 -55175913 - AluJo SINE Alu -8 304 1 325 333 61 33 chr5 147909675 147909855 -55175677 - HAL1b LINE L1 -417 931 747 2349 113 3 0 chr5 147909935 147910244 -55175288 + AluSx SINE Alu 1 310 -2 489 265 143 0 chr5 147910455 147910651 -55174881 - HAL1 LINE L1 -634 1873 1650 389 60 0 0 chr5 147910680 147910730 -55174802 + AluJb SINE Alu 28 77 -225 2273 117 3 0 chr5 147910730 147911030 -55174502 - AluSp SINE Alu -12 301 1 1558 166 4 0 chr5 147911030 147911264 -55174268 + AluJb SINE Alu 66 301 -11 2660 208 72 54 chr5 147911264 147912194 -55173338 - L1MC5 LINE L1 -54 7907 6961 320 236 41 17 chr5 147912356 147912523 -55173009 - L1MC5 LINE L1 -1133 6681 6502 2131 138 3 3 chr5 147912570 147912881 -55172651 + AluSx SINE Alu 1 311 -1 807 191 43 78 chr5 147912890 147913172 -55172360 - HAL1 LINE L1 -860 1647 1376 907 201 0 0 chr5 147913202 147913356 -55172176 + AluSg/x SINE Alu 145 298 -12 454 338 141 23 chr5 147914163 147914773 -55170759 - L2 LINE L2 -599 2715 2034 953 214 16 76 chr5 147914904 147915087 -55170445 - L2 LINE L2 -1 3312 3153 2095 121 47 0 chr5 147915087 147915385 -55170147 + AluSx SINE Alu 1 312 0 953 214 16 76 chr5 147915385 147915505 -55170027 - L2 LINE L2 -160 3153 3027 1963 147 3 35 chr5 147915505 147915819 -55169713 - AluJo SINE Alu -8 304 1 1160 137 0 71 chr5 147915833 147916030 -55169502 + FRAM SINE Alu 1 176 0 296 200 0 0 chr5 147916044 147916099 -55169433 - L2 LINE L2 -1407 1907 1853 2073 136 33 0 chr5 147916645 147916947 -55168585 + AluSx SINE Alu 1 312 0 238 186 0 0 chr5 147917955 147917998 -55167534 + L2 LINE L2 3228 3270 -2 226 175 206 0 chr5 147918238 147918301 -55167231 + MLT1L LTR MaLR 22 97 -518 537 16 0 0 chr5 147918607 147918669 -55166863 + (TC)n Simple_repeat Simple_repeat 1 62 0 1875 162 3 10 chr5 147918724 147919032 -55166500 + AluJb SINE Alu 1 306 -6 365 293 7 36 chr5 147919630 147919770 -55165762 + L2 LINE L2 3178 3313 0 24 0 0 0 chr5 147919899 147919923 -55165609 + AT_rich Low_complexity Low_complexity 1 24 0 847 253 69 9 chr5 147919932 147920165 -55165367 - MIR SINE MIR -10 252 6 2177 164 102 30 chr5 147920166 147920637 -55164895 - MLT1D LTR MaLR 0 505 1 2092 129 7 26 chr5 147921759 147922069 -55163463 - AluSx SINE Alu -8 304 1 1711 197 3 3 chr5 147922073 147922377 -55163155 - AluJo SINE Alu -8 304 1 420 170 0 200 chr5 147922730 147922813 -55162719 + MER69 DNA AcHobo 2395 2431 -95 1883 153 0 3 chr5 147922813 147923100 -55162432 - AluJo SINE Alu -21 291 6 420 170 0 200 chr5 147923100 147923181 -55162351 + MER69 DNA AcHobo 2430 2526 0 2360 103 0 10 chr5 147923797 147924108 -55161424 + AluSx SINE Alu 1 308 -4 3531 210 114 35 chr5 147925205 147926375 -55159157 + HAL1b LINE L1 83 1345 -3 315 211 175 18 chr5 147926406 147926520 -55159012 + L1ME4a LINE L1 5989 6120 -1 523 253 347 8 chr5 147926564 147926944 -55158588 + MLT1J LTR MaLR 3 511 0 417 296 43 74 chr5 147927047 147927277 -55158255 + L1M4 LINE L1 5007 5229 -917 266 214 128 43 chr5 147927370 147927487 -55158045 - MER103 DNA DNA -38 128 2 350 250 203 42 chr5 147928042 147928254 -55157278 - MIR SINE MIR -14 248 3 29 70 0 0 chr5 147929480 147929537 -55155995 + GC_rich Low_complexity Low_complexity 1 57 0 21 71 0 0 chr5 147929727 147929769 -55155763 + GC_rich Low_complexity Low_complexity 1 42 0 261 83 0 0 chr5 147930639 147930675 -55154857 + (GGA)n Simple_repeat Simple_repeat 3 38 0 708 278 58 0 chr5 147931233 147931438 -55154094 + MIR SINE MIR 33 249 -13 208 303 121 23 chr5 147931864 147931996 -55153536 + MIR SINE MIR 46 190 -72 456 281 44 7 chr5 147936216 147936351 -55149181 + Charlie8 DNA MER1_type 4 143 -2274 2122 109 18 3 chr5 147936351 147936635 -55148897 + AluSx SINE Alu 1 288 -24 1074 143 0 4 chr5 147936635 147936857 -55148675 + (TA)n Simple_repeat Simple_repeat 1 222 0 423 259 75 41 chr5 147936862 147937009 -55148523 + Charlie8 DNA MER1_type 124 275 -2142 576 333 89 0 chr5 147937068 147937293 -55148239 + MIR SINE MIR 14 258 -4 321 179 0 0 chr5 147937324 147937380 -55148152 + Charlie8 DNA MER1_type 1363 1418 -999 246 308 75 19 chr5 147937386 147937493 -55148039 + L2 LINE L2 3160 3272 0 383 318 170 5 chr5 147937527 147937750 -55147782 + MIR SINE MIR 2 261 -1 262 275 202 21 chr5 147937894 147938087 -55147445 - MLT1K LTR MaLR -17 571 344 393 22 0 0 chr5 147938841 147938887 -55146645 + (TG)n Simple_repeat Simple_repeat 1 46 0 257 194 0 16 chr5 147946280 147946342 -55139190 + CT-rich Low_complexity Low_complexity 5 65 0 207 268 113 0 chr5 147949199 147949270 -55136262 - L2 LINE L2 -44 3228 3150 696 204 164 0 chr5 147949584 147949736 -55135796 - MER69A DNA AcHobo 0 177 1 590 234 39 0 chr5 147950434 147950562 -55134970 + MER94 DNA DNA 2 134 0 725 221 92 8 chr5 147951187 147951392 -55134140 - MIR SINE MIR -33 229 15 212 182 45 0 chr5 147952527 147952571 -55132961 + MIR3 SINE MIR 117 162 -46 216 0 0 0 chr5 147952850 147952874 -55132658 + (A)n Simple_repeat Simple_repeat 1 24 0 2101 124 0 19 chr5 147957550 147957857 -55127675 - AluSx SINE Alu -11 301 1 277 326 21 0 chr5 147959832 147959927 -55125605 + MIR SINE MIR 80 176 -86 180 179 0 0 chr5 147959932 147959971 -55125561 + (TA)n Simple_repeat Simple_repeat 1 39 0 898 179 7 7 chr5 147960045 147960196 -55125336 - FAM SINE Alu -34 151 1 21 82 0 0 chr5 147960203 147960252 -55125280 + AT_rich Low_complexity Low_complexity 1 49 0 1004 135 142 42 chr5 147960252 147960512 -55125020 + L1MCa LINE L1 1255 1540 -4886 5085 124 95 4 chr5 147960520 147961350 -55124182 + L1PA16 LINE L1 5255 6160 -6 2174 117 3 0 chr5 147961397 147961687 -55123845 + AluSx SINE Alu 21 311 -1 2812 127 277 3 chr5 147961760 147962389 -55123143 + L1MCa LINE L1 1514 2314 -4112 304 288 53 76 chr5 147962379 147962722 -55122810 + L1MEc LINE L1 2064 2413 -4308 * 2382 95 3 0 chr5 147962722 147963027 -55122505 - AluSg SINE Alu -4 306 1 2127 132 0 0 chr5 147963027 147963330 -55122202 - AluSx SINE Alu -6 306 4 304 288 53 76 chr5 147963330 147963474 -55122058 + L1MEc LINE L1 2411 2541 -4180 1659 171 7 23 chr5 147963474 147963779 -55121753 + AluJo SINE Alu 1 300 -12 576 146 0 0 chr5 147963779 147963882 -55121650 + (GGGA)n Simple_repeat Simple_repeat 2 104 0 328 211 3 3 chr5 147963882 147964003 -55121529 + L1MEc LINE L1 2441 2599 -3979 786 181 32 85 chr5 147964027 147964066 -55121466 + MLT1A2 LTR MaLR 1 41 -333 2165 131 0 0 chr5 147964066 147964371 -55121161 - AluSx SINE Alu -3 309 5 786 181 32 85 chr5 147964371 147964519 -55121013 + MLT1A2 LTR MaLR 41 178 -196 294 87 0 0 chr5 147964577 147964623 -55120909 + (GA)n Simple_repeat Simple_repeat 2 47 0 1821 217 128 9 chr5 147964629 147965168 -55120364 + L1MB8 LINE L1 3813 4415 -1731 1155 107 0 25 chr5 147965173 147965364 -55120168 + AluSg/x SINE Alu 129 315 0 4018 167 71 74 chr5 147965365 147965846 -55119686 + L1MB8 LINE L1 4411 4892 -1286 302 119 0 0 chr5 147965846 147965888 -55119644 - 5S rRNA rRNA -79 42 1 4018 167 71 74 chr5 147965888 147965992 -55119540 + L1MB8 LINE L1 4892 4995 -1183 2314 107 3 0 chr5 147965992 147966300 -55119232 + AluSx SINE Alu 3 311 -1 4018 167 71 74 chr5 147966300 147966333 -55119199 + L1MB8 LINE L1 4995 5027 -1151 2381 51 3 51 chr5 147966333 147966647 -55118885 + AluY SINE Alu 1 299 -12 4018 167 71 74 chr5 147966647 147967768 -55117764 + L1MB8 LINE L1 5027 6169 -9 382 307 57 16 chr5 147967781 147967973 -55117559 - L2 LINE L2 -157 3156 2957 * 869 222 21 11 chr5 147967967 147968156 -55117376 + MIR SINE MIR 39 229 -33 1005 230 214 88 chr5 147968218 147968774 -55116758 - L2 LINE L2 -382 2932 2307 254 247 108 0 chr5 147968826 147968919 -55116613 - L2 LINE L2 -31 3282 3180 22 35 0 0 chr5 147969576 147969605 -55115927 + GC_rich Low_complexity Low_complexity 1 29 0 287 253 190 44 chr5 147970063 147970221 -55115311 + MIR SINE MIR 72 252 -10 212 376 12 0 chr5 147970235 147970320 -55115212 - L2 LINE L2 -14 3299 3214 546 224 97 61 chr5 147970459 147970655 -55114877 - Charlie8 DNA MER1_type -2214 203 1 976 267 85 28 chr5 147970752 147971215 -55114317 - L2 LINE L2 -204 3068 2573 2192 118 0 0 chr5 147971460 147971757 -55113775 + AluSx SINE Alu 5 301 -11 213 267 0 0 chr5 147972212 147972257 -55113275 - L2 LINE L2 -7 3306 3262 450 258 25 31 chr5 147972642 147972660 -55112872 - L1MA10 LINE L1 -2 6332 6315 958 242 61 21 chr5 147972660 147972971 -55112561 - L1ME2 LINE L1 -9 6155 5835 363 153 282 0 chr5 147972957 147973042 -55112490 - L1M4 LINE L1 -1538 4608 4500 * 1407 210 14 0 chr5 147973068 147973344 -55112188 - AluJo SINE Alu -32 280 1 857 175 53 0 chr5 147973344 147973533 -55111999 - L1M4 LINE L1 -1635 4511 4313 1410 177 30 76 chr5 147973536 147973904 -55111628 - L1MB7 LINE L1 -13 6171 5821 2349 88 0 0 chr5 147973906 147974203 -55111329 - AluY SINE Alu -14 297 1 1088 91 0 0 chr5 147974204 147974336 -55111196 - AluSg SINE Alu -178 132 1 1975 165 45 0 chr5 147974336 147974694 -55110838 - L1MB7 LINE L1 -353 5831 5458 3342 194 77 39 chr5 147974698 147974823 -55110709 - L1M4 LINE L1 -1818 4328 4209 2311 92 3 0 chr5 147974823 147975117 -55110415 + AluSg SINE Alu 1 295 -15 3342 194 77 39 chr5 147975117 147975837 -55109695 - L1M4 LINE L1 -1937 4209 3451 1098 168 0 0 chr5 147975842 147976009 -55109523 - AluJb SINE Alu -12 300 134 1741 174 3 25 chr5 147976009 147976326 -55109206 - AluJb SINE Alu -2 310 1 2202 107 3 3 chr5 147976336 147976646 -55108886 - AluSx SINE Alu -2 310 1 2570 228 48 7 chr5 147976646 147977341 -55108191 - L1M4 LINE L1 -2699 3447 2721 1050 191 0 0 chr5 147977355 147977533 -55107999 - AluJ SINE Alu -6 306 129 2702 88 0 0 chr5 147977545 147977884 -55107648 - L1PB1 LINE L1 -2 6149 5811 849 141 6 70 chr5 147977884 147978040 -55107492 - AluJ SINE Alu -166 146 1 2047 126 0 3 chr5 147978050 147978377 -55107155 - AluSx SINE Alu 0 326 1 22 56 0 0 chr5 147978381 147978417 -55107115 + AT_rich Low_complexity Low_complexity 1 36 0 882 159 47 41 chr5 147978452 147978622 -55106910 + AluJo SINE Alu 121 291 -21 184 263 0 0 chr5 147978630 147978668 -55106864 + L2 LINE L2 3217 3254 -18 24 0 0 0 chr5 147978690 147978714 -55106818 + AT_rich Low_complexity Low_complexity 1 24 0 516 274 196 80 chr5 147979230 147979628 -55105904 + L2 LINE L2 2829 3272 0 411 302 117 5 chr5 147979776 147979998 -55105534 - MIR SINE MIR -14 248 2 379 259 71 0 chr5 147980807 147980919 -55104613 - L1MC/D LINE L1 -2109 5699 5580 349 244 0 44 chr5 147981198 147981270 -55104262 - MIR SINE MIR -66 142 75 523 285 180 5 chr5 147981270 147981470 -55104062 + MIR SINE MIR 2 236 -26 262 154 0 0 chr5 147981781 147981820 -55103712 - MER20B DNA MER1_type 0 783 745 450 0 0 0 chr5 147981974 147982024 -55103508 + (TA)n Simple_repeat Simple_repeat 2 51 0 8387 37 1 0 chr5 147982025 147983739 -55101793 - L1PA5 LINE L1 0 6154 4433 1971 221 109 70 chr5 147983766 147984453 -55101079 - MER20B DNA MER1_type -69 714 1 373 343 0 9 chr5 147984657 147984765 -55100767 + MER5C DNA MER1_type 18 124 -200 307 323 150 46 chr5 147985644 147986077 -55099455 + L2 LINE L2 2827 3304 -9 431 296 106 11 chr5 147986497 147986686 -55098846 - MIR SINE MIR -10 252 46 710 175 25 0 chr5 147986690 147986810 -55098722 + FLAM_C SINE Alu 2 124 -9 2044 86 72 0 chr5 147987051 147987330 -55098202 + AluSq SINE Alu 3 301 -12 452 321 118 3 chr5 147987471 147987786 -55097746 + L1MC/D LINE L1 5293 5643 -2165 1911 144 0 7 chr5 147987902 147988219 -55097313 + AluSx SINE Alu 1 315 0 2134 133 0 0 chr5 147988221 147988522 -55097010 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr5 147988860 147988881 -55096651 + AT_rich Low_complexity Low_complexity 1 21 0 766 148 0 0 chr5 147989361 147989462 -55096070 - AluSp/q SINE Alu -51 262 162 696 200 39 22 chr5 147990110 147990290 -55095242 - L1MC5 LINE L1 -32 7929 7747 2278 136 22 14 chr5 147992019 147992386 -55093146 - L1MB4 LINE L1 0 6180 5811 2945 151 55 25 chr5 147992388 147992638 -55092894 - L1MB3 LINE L1 -7 6176 5935 2368 98 0 3 chr5 147992638 147992945 -55092587 + AluSx SINE Alu 5 310 -2 2945 151 55 25 chr5 147992945 147993256 -55092276 - L1MB3 LINE L1 -248 5935 5598 1437 225 5 62 chr5 147993349 147993631 -55091901 - L1MD3 LINE L1 -2 7993 7696 239 0 32 0 chr5 147993631 147993662 -55091870 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2114 118 3 0 chr5 147993664 147993953 -55091579 - AluSc SINE Alu -19 290 1 1437 225 5 62 chr5 147993953 147994102 -55091430 - L1MD3 LINE L1 -300 7695 7584 2393 224 67 15 chr5 147994106 147994704 -55090828 - L1MC4a LINE L1 -539 7269 6641 28 0 0 0 chr5 147995175 147995203 -55090329 + AT_rich Low_complexity Low_complexity 1 28 0 2182 121 7 0 chr5 147995224 147995521 -55090011 - AluSx SINE Alu -13 299 1 205 134 0 149 chr5 147995549 147995616 -55089916 + L3b LINE CR1 1434 1490 -93 2211 85 0 3 chr5 147996182 147996496 -55089036 - AluSg SINE Alu 0 313 1 787 207 207 0 chr5 147996960 147997139 -55088393 + MER58A DNA MER1_type 1 216 -8 21 0 0 0 chr5 147997224 147997245 -55088287 + AT_rich Low_complexity Low_complexity 1 21 0 2398 65 3 0 chr5 147998523 147998829 -55086703 - AluY SINE Alu -4 307 1 32 0 0 0 chr5 147998956 147998988 -55086544 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 148000439 148000470 -55085062 + AT_rich Low_complexity Low_complexity 1 31 0 741 129 9 0 chr5 148005089 148005205 -55080327 - L1MB3 LINE L1 -10 6173 6057 1944 127 7 16 chr5 148005308 148005615 -55079917 - AluSx SINE Alu -8 304 1 180 325 125 0 chr5 148006196 148006316 -55079216 - L2 LINE L2 -1 3271 3137 188 224 17 69 chr5 148006379 148006437 -55079095 + MIR3 SINE MIR 138 192 -16 2487 45 0 13 chr5 148006969 148007279 -55078253 + AluY SINE Alu 1 306 -5 2131 104 0 26 chr5 148007793 148008101 -55077431 + AluSx SINE Alu 1 300 -12 329 276 123 18 chr5 148008901 148009064 -55076468 - Charlie8 DNA MER1_type -2096 321 142 * 390 105 0 0 chr5 148009062 148009119 -55076413 - AluSq SINE Alu 0 300 244 1191 140 0 0 chr5 148009119 148009297 -55076235 - AluSq SINE Alu -135 178 1 29 47 0 0 chr5 148011153 148011196 -55074336 + AT_rich Low_complexity Low_complexity 1 43 0 2203 110 0 0 chr5 148011359 148011668 -55073864 + AluSx SINE Alu 1 309 -3 29 0 0 0 chr5 148011774 148011803 -55073729 + AT_rich Low_complexity Low_complexity 1 29 0 1420 163 80 49 chr5 148012434 148012722 -55072810 - AluSx SINE Alu -5 297 1 2220 68 14 17 chr5 148012836 148013131 -55072401 - AluSg SINE Alu -16 294 1 21 0 0 0 chr5 148013912 148013933 -55071599 + AT_rich Low_complexity Low_complexity 1 21 0 3222 73 0 0 chr5 148014410 148014822 -55070710 - L1PA14 LINE L1 -17 6144 5733 2096 110 3 10 chr5 148014833 148015210 -55070322 - AluSq SINE Alu 0 313 1 2072 119 3 0 chr5 148015271 148015565 -55069967 - AluSp SINE Alu -18 295 1 2314 76 16 0 chr5 148015882 148016185 -55069347 - AluY SINE Alu -3 308 1 1062 127 162 9 chr5 148016192 148016421 -55069111 - L1MA5A LINE L1 0 6297 6034 940 176 0 0 chr5 148016430 148016589 -55068943 - AluJo/FRAM SINE Alu -20 292 134 2140 116 7 0 chr5 148016589 148016892 -55068640 - AluSg SINE Alu -4 306 2 1713 180 14 0 chr5 148018141 148018436 -55067096 - AluJo SINE Alu -12 300 2 198 295 189 48 chr5 148018813 148018953 -55066579 - L2 LINE L2 -430 2884 2765 1460 172 66 0 chr5 148018953 148019226 -55066306 - AluJb SINE Alu -21 291 1 198 295 189 48 chr5 148019226 148019254 -55066278 - L2 LINE L2 -549 2765 2742 2090 95 0 11 chr5 148019254 148019566 -55065966 + AluSc SINE Alu 1 309 0 198 295 189 48 chr5 148019566 148019620 -55065912 - L2 LINE L2 -572 2742 2626 2249 99 0 6 chr5 148019939 148020251 -55065281 + AluSx SINE Alu 1 310 -2 2287 92 3 0 chr5 148020985 148021291 -55064241 - AluSx SINE Alu -5 307 1 3739 144 23 30 chr5 148021978 148022440 -55063092 - L1MB7 LINE L1 0 6184 5727 1881 144 27 0 chr5 148022440 148022732 -55062800 - AluJb SINE Alu -12 300 1 3739 144 23 30 chr5 148022732 148022975 -55062557 - L1MB7 LINE L1 -457 5727 5484 729 0 0 0 chr5 148023020 148023101 -55062431 + (CA)n Simple_repeat Simple_repeat 2 82 0 367 182 73 27 chr5 148023250 148023360 -55062172 - L1MC5 LINE L1 -30 7931 7817 321 178 27 14 chr5 148023747 148023820 -55061712 - HAL1 LINE L1 -359 2148 2075 23 33 0 0 chr5 148024185 148024215 -55061317 + AT_rich Low_complexity Low_complexity 1 30 0 413 327 18 42 chr5 148024822 148024987 -55060545 + MIR SINE MIR 43 203 -59 2343 257 100 96 chr5 148025048 148026829 -55058703 + L2 LINE L2 1511 3313 0 215 211 39 0 chr5 148027757 148027809 -55057723 - L2 LINE L2 -210 3062 3009 526 127 18 82 chr5 148028136 148028246 -55057286 + MER5A DNA MER1_type 4 106 -83 428 280 226 12 chr5 148028316 148028723 -55056809 - L1ME4a LINE L1 0 6121 5628 475 216 23 91 chr5 148030537 148030713 -55054819 - MIR3 SINE MIR -23 185 22 669 131 0 0 chr5 148030874 148030981 -55054551 + (CA)n Simple_repeat Simple_repeat 2 108 0 1810 136 31 3 chr5 148030992 148031278 -55054254 + AluJb SINE Alu 3 296 -16 331 231 15 0 chr5 148031993 148032058 -55053474 - L2 LINE L2 0 3272 3207 1603 156 30 36 chr5 148033513 148033815 -55051717 - AluJb SINE Alu -12 300 1 2423 62 0 3 chr5 148034159 148034463 -55051069 - AluY SINE Alu -6 305 3 1703 119 7 43 chr5 148034569 148034847 -55050685 - AluJb SINE Alu -44 268 1 2553 154 41 20 chr5 148034896 148035043 -55050489 - L1MA8 LINE L1 -7 6284 6141 2165 110 0 3 chr5 148035043 148035342 -55050190 - AluSx SINE Alu -14 298 1 2553 154 41 20 chr5 148035342 148035687 -55049845 - L1MA8 LINE L1 -150 6141 5782 1005 252 86 126 chr5 148035836 148036535 -55048997 - MER77 LTR ERV1 -6 599 24 442 267 87 16 chr5 148037462 148037642 -55047890 + MIR SINE MIR 34 223 -39 688 257 112 14 chr5 148037674 148037888 -55047644 + MIR SINE MIR 5 239 -23 270 271 70 0 chr5 148038099 148038228 -55047304 - LTR67 LTR ERVL -8 549 412 221 281 209 52 chr5 148038953 148039163 -55046369 + MIR SINE MIR 8 250 -12 192 77 0 0 chr5 148039169 148039195 -55046337 + (CACCAT)n Simple_repeat Simple_repeat 5 30 0 2915 178 29 7 chr5 148039414 148039959 -55045573 - MER41D LTR ERV1 0 557 1 205 233 223 10 chr5 148040316 148040419 -55045113 + L2 LINE L2 2390 2514 -800 293 164 164 95 chr5 148040457 148040573 -55044959 + L1MC5 LINE L1 7788 7911 -50 224 200 42 21 chr5 148040611 148040706 -55044826 + (TA)n Simple_repeat Simple_repeat 1 97 0 565 294 185 29 chr5 148040718 148041387 -55044145 + L2 LINE L2 2532 3313 0 244 221 58 23 chr5 148042185 148042271 -55043261 - L1ME4a LINE L1 -2 6119 6031 275 243 37 56 chr5 148045027 148045134 -55040398 + L3 LINE CR1 1383 1487 -90 216 329 0 43 chr5 148045177 148045247 -55040285 + MIR SINE MIR 9 75 -187 224 254 17 17 chr5 148045288 148045347 -55040185 + MIR SINE MIR 76 134 -74 428 261 0 26 chr5 148046717 148046832 -55038700 - MIR SINE MIR -48 214 103 249 217 205 59 chr5 148047832 148048033 -55037499 + MIR SINE MIR 8 262 0 587 192 54 39 chr5 148049300 148049453 -55036079 - FLAM_A SINE Alu 0 133 1 385 285 110 78 chr5 148050273 148050810 -55034722 - L1M2 LINE L1 -5595 1254 554 350 219 9 38 chr5 148051212 148051317 -55034215 + LTR40a LTR ERVL 2 103 -416 2674 39 0 3 chr5 148051317 148051624 -55033908 + AluY SINE Alu 1 306 -5 1240 142 4 49 chr5 148051625 148051850 -55033682 - Tigger2a DNA MER2_type -219 215 1 247 310 23 46 chr5 148051873 148052047 -55033485 - L1MC4a LINE L1 -1768 6040 5871 261 211 127 49 chr5 148052100 148052242 -55033290 - HAL1 LINE L1 -1241 1266 1114 526 291 198 20 chr5 148052327 148052390 -55033142 - HAL1 LINE L1 -1551 956 906 1697 148 43 7 chr5 148052390 148052668 -55032864 + AluJo SINE Alu 3 290 -22 526 291 198 20 chr5 148052668 148053013 -55032519 - HAL1 LINE L1 -1601 906 475 717 249 141 14 chr5 148053065 148053362 -55032170 - HAL1 LINE L1 -2126 381 47 267 193 80 0 chr5 148053511 148053599 -55031933 - L1ME4a LINE L1 -187 5934 5840 336 224 103 28 chr5 148053639 148053746 -55031786 - L1ME4a LINE L1 -58 6063 5949 2002 156 7 0 chr5 148053784 148054092 -55031440 - AluJb SINE Alu -2 310 1 993 166 16 57 chr5 148054117 148054310 -55031222 - AluJb SINE Alu -22 290 106 657 192 0 0 chr5 148054493 148054597 -55030935 - AluJb SINE Alu -207 105 2 1308 234 119 32 chr5 148054679 148055018 -55030514 - L2 LINE L2 0 3313 2896 1798 199 42 22 chr5 148055018 148055374 -55030158 - MLT1A1 LTR MaLR -2 363 1 1308 234 119 32 chr5 148055374 148055588 -55029944 - L2 LINE L2 -417 2896 2702 4253 235 54 18 chr5 148055605 148056728 -55028804 - L1MC4a LINE L1 -7 7801 6638 824 229 103 63 chr5 148056736 148056993 -55028539 - L1M4c LINE L1 -4282 2543 2298 2374 84 0 3 chr5 148056993 148057292 -55028240 - AluSq SINE Alu -15 298 1 824 229 103 63 chr5 148057292 148057532 -55028000 - L1M4c LINE L1 -4527 2298 1868 1274 191 37 8 chr5 148057532 148057773 -55027759 + AluJo SINE Alu 1 248 -64 7314 189 53 36 chr5 148057779 148059570 -55025962 - L1M4c LINE L1 -4767 1879 16 726 269 41 14 chr5 148059588 148059807 -55025725 - L1MC4a LINE L1 -1205 6603 6379 1511 233 92 46 chr5 148059807 148059953 -55025579 - L2 LINE L2 -600 2714 2576 2370 134 3 23 chr5 148059953 148060297 -55025235 + MER1B DNA MER1_type 1 337 0 1511 233 92 46 chr5 148060297 148060631 -55024901 - L2 LINE L2 -738 2576 2212 1141 169 31 36 chr5 148060717 148060942 -55024590 - AluJb SINE Alu -2 310 87 910 297 129 15 chr5 148060953 148061286 -55024246 + LTR16C LTR ERVL 121 491 0 588 221 38 0 chr5 148061286 148061417 -55024115 - L2 LINE L2 -1103 2211 2076 1317 243 141 38 chr5 148061422 148061801 -55023731 - L2 LINE L2 -2155 1159 708 1764 138 4 0 chr5 148061801 148062055 -55023477 + AluSx SINE Alu 41 295 -17 1317 243 141 38 chr5 148062055 148062207 -55023325 - L2 LINE L2 -2606 708 573 830 230 64 0 chr5 148062233 148062437 -55023095 - MIR SINE MIR -10 252 36 539 248 57 32 chr5 148062480 148062637 -55022895 - L2 LINE L2 -2796 518 358 326 283 102 23 chr5 148062890 148063067 -55022465 - L1M4 LINE L1 -2206 3940 3750 600 231 45 8 chr5 148063120 148063254 -55022278 - MLT1D LTR MaLR -366 139 1 383 138 35 0 chr5 148063255 148063313 -55022219 - MER105 DNA DNA -144 60 1 243 271 148 32 chr5 148063749 148063904 -55021628 + L3 LINE CR1 1390 1562 -15 195 279 59 0 chr5 148063896 148063964 -55021568 - MIR3 SINE MIR -38 170 99 * 2444 77 13 0 chr5 148067456 148067756 -55017776 - AluSq SINE Alu -9 304 1 301 208 56 14 chr5 148068225 148068297 -55017235 + HsTC2 DNA Tc2 1799 1873 -25 2145 103 6 28 chr5 148068999 148069318 -55016214 + AluSx SINE Alu 1 312 0 48 60 0 0 chr5 148069742 148069825 -55015707 + AT_rich Low_complexity Low_complexity 1 83 0 365 299 113 17 chr5 148071496 148071673 -55013859 - MIR SINE MIR 0 262 69 560 308 92 48 chr5 148071834 148072807 -55012725 + L1ME LINE L1 3682 4696 -1450 798 270 144 39 chr5 148072809 148072992 -55012540 + L1ME LINE L1 4804 4966 -1155 1744 156 4 4 chr5 148072992 148073262 -55012270 + AluJb SINE Alu 38 307 -5 798 270 144 39 chr5 148073262 148073426 -55012106 + L1ME LINE L1 4966 5111 -1010 2289 112 0 13 chr5 148073426 148073739 -55011793 + AluSx SINE Alu 1 309 -3 798 270 144 39 chr5 148073739 148074288 -55011244 + L1ME LINE L1 5111 5820 -301 839 196 0 0 chr5 148074961 148075104 -55010428 + FRAM SINE Alu 1 143 -33 2153 126 3 0 chr5 148075411 148075712 -55009820 + AluSx SINE Alu 1 302 -10 1501 65 48 0 chr5 148075893 148076079 -55009453 - MER107 DNA MER1_type 0 197 3 2226 94 10 3 chr5 148076490 148076787 -55008745 + AluSq SINE Alu 1 299 -14 2825 269 141 29 chr5 148077866 148077961 -55007571 + L2 LINE L2 1716 1799 -1514 2316 95 0 3 chr5 148077961 148078267 -55007265 - AluSp SINE Alu -8 305 1 2825 269 141 29 chr5 148078267 148079355 -55006177 + L2 LINE L2 1799 3029 -284 1920 133 0 31 chr5 148079666 148079960 -55005572 + AluSx SINE Alu 17 301 -11 246 263 0 0 chr5 148080361 148080418 -55005114 - MIR SINE MIR -119 143 87 4686 104 51 19 chr5 148080438 148080666 -55004866 + L1MA3 LINE L1 5562 5781 -524 1698 115 127 0 chr5 148080666 148080926 -55004606 + AluSx SINE Alu 4 296 -16 4686 104 51 19 chr5 148080926 148081418 -55004114 + L1MA3 LINE L1 5781 6305 0 2809 3 0 0 chr5 148081445 148081744 -55003788 + AluYa5 SINE Alu 1 299 -12 1608 159 101 4 chr5 148081937 148082213 -55003319 - AluJb SINE Alu -8 304 2 23 0 0 0 chr5 148082780 148082803 -55002729 + AT_rich Low_complexity Low_complexity 1 23 0 564 287 124 73 chr5 148083147 148083346 -55002186 + L1ME3A LINE L1 455 642 -5888 2164 101 3 10 chr5 148083346 148083634 -55001898 - AluSx SINE Alu -26 286 1 564 287 124 73 chr5 148083634 148084198 -55001334 + L1ME3A LINE L1 642 1257 -5273 353 172 4 0 chr5 148084233 148084300 -55001232 + Alu SINE Alu 2 52 -251 1909 155 7 13 chr5 148084372 148084675 -55000857 + AluSx SINE Alu 1 301 -11 685 275 99 26 chr5 148084805 148085358 -55000174 + L1ME3A LINE L1 1478 2075 -892 805 233 57 0 chr5 148085519 148085695 -54999837 - MER5A DNA MER1_type -3 186 1 2427 137 66 15 chr5 148085769 148086177 -54999355 + Tigger2a DNA MER2_type 6 434 0 349 267 27 47 chr5 148086179 148086329 -54999203 + L1ME3A LINE L1 2433 2579 -3961 662 271 108 35 chr5 148086353 148086630 -54998902 + L1ME3A LINE L1 5144 5399 -1141 2408 62 0 3 chr5 148086630 148086920 -54998612 + AluY SINE Alu 5 293 -18 662 271 108 35 chr5 148086920 148086944 -54998588 + L1ME3A LINE L1 5399 5420 -1120 318 80 0 0 chr5 148086944 148086994 -54998538 + (TA)n Simple_repeat Simple_repeat 1 50 0 * 397 0 19 19 chr5 148086993 148087047 -54998485 + (GA)n Simple_repeat Simple_repeat 2 55 0 662 271 108 35 chr5 148086994 148087265 -54998267 + L1ME3A LINE L1 5420 5702 -838 815 261 0 0 chr5 148087267 148087432 -54998100 + FRAM SINE Alu 1 165 -1 265 309 105 6 chr5 148087448 148087610 -54997922 + L1ME3A LINE L1 5828 6005 -553 406 234 152 22 chr5 148087667 148087851 -54997681 + L1ME3A LINE L1 6124 6331 -233 2428 90 3 0 chr5 148088153 148088464 -54997068 + AluSp SINE Alu 1 312 -1 188 204 0 45 chr5 148089378 148089422 -54996110 - MIR SINE MIR -12 250 209 232 127 99 99 chr5 148091180 148091251 -54994281 - Charlie7 DNA MER1_type -2503 109 39 1146 182 124 46 chr5 148092064 148092371 -54993161 - MER2 DNA MER2_type -14 331 1 524 281 54 68 chr5 148092785 148092934 -54992598 + MIR SINE MIR 31 178 -84 2177 106 23 10 chr5 148092934 148093236 -54992296 + AluSx SINE Alu 1 306 -6 524 281 54 68 chr5 148093236 148093307 -54992225 + MIR SINE MIR 178 248 -14 246 242 81 71 chr5 148093461 148093560 -54991972 + MIR SINE MIR 50 149 -59 252 313 21 21 chr5 148093888 148093984 -54991548 - MER5B DNA MER1_type -23 155 60 1953 135 25 0 chr5 148093997 148094278 -54991254 - AluJb SINE Alu -24 288 1 2838 164 69 2 chr5 148094308 148094828 -54990704 - L1MB7 LINE L1 0 6184 5630 2568 56 0 3 chr5 148095101 148095407 -54990125 - AluY SINE Alu -6 305 1 2214 116 0 0 chr5 148095408 148095722 -54989810 - AluSq SINE Alu 0 313 1 256 223 151 36 chr5 148096632 148096771 -54988761 + L1MA6 LINE L1 5771 5925 -375 28 0 0 0 chr5 148096775 148096803 -54988729 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 148096974 148096996 -54988536 + AT_rich Low_complexity Low_complexity 1 22 0 2132 129 0 10 chr5 148097020 148097331 -54988201 - AluSx SINE Alu -4 308 1 21 71 0 0 chr5 148097578 148097620 -54987912 + AT_rich Low_complexity Low_complexity 1 42 0 239 299 52 52 chr5 148097771 148097868 -54987664 + MIR3 SINE MIR 15 111 -97 22 56 0 0 chr5 148098217 148098253 -54987279 + AT_rich Low_complexity Low_complexity 1 36 0 809 200 127 36 chr5 148098296 148098516 -54987016 - MIR SINE MIR -21 241 2 213 286 150 15 chr5 148099072 148099205 -54986327 + MIR SINE MIR 62 212 -50 24 32 0 0 chr5 148099279 148099310 -54986222 + AT_rich Low_complexity Low_complexity 1 31 0 308 262 48 0 chr5 148099465 148099549 -54985983 + MER117 DNA MER1_type 68 155 -42 247 291 281 5 chr5 148099559 148099762 -54985770 - L3 LINE CR1 -48 1529 1271 9813 83 9 1 chr5 148099773 148101149 -54984383 - L1P LINE L1 -2069 4077 2690 1544 177 38 14 chr5 148101197 148101485 -54984047 + AluJo SINE Alu 1 295 -17 2121 117 13 0 chr5 148101488 148101788 -54983744 + AluSx SINE Alu 1 304 -8 2167 133 0 3 chr5 148102264 148102573 -54982959 + AluSq SINE Alu 1 308 -5 1786 175 18 23 chr5 148103560 148103903 -54981629 - L1MC4a LINE L1 -376 7432 7092 1514 218 46 11 chr5 148103899 148104271 -54981261 + L1MD3 LINE L1 7609 7993 -2 * 21 0 0 0 chr5 148104671 148104692 -54980840 + AT_rich Low_complexity Low_complexity 1 21 0 3724 53 0 6 chr5 148104692 148105164 -54980368 - L1PA7 LINE L1 -3 6151 5683 1883 112 12 4 chr5 148105533 148105791 -54979741 + AluSq SINE Alu 1 260 -53 22 56 0 0 chr5 148105801 148105837 -54979695 + AT_rich Low_complexity Low_complexity 1 36 0 776 172 12 6 chr5 148105878 148106041 -54979491 - L1MA7 LINE L1 -2 6289 6126 869 265 233 5 chr5 148106336 148106713 -54978819 + L2 LINE L2 2807 3269 -44 467 248 120 0 chr5 148106924 148107057 -54978475 - MIR3 SINE MIR -22 186 38 859 183 0 33 chr5 148107106 148107259 -54978273 + FRAM SINE Alu 1 145 -31 715 278 143 56 chr5 148107888 148108370 -54977162 + MLT1G1 LTR MaLR 72 595 0 195 294 224 0 chr5 148108383 148108468 -54977064 - L2 LINE L2 -2 3311 3208 2195 104 3 10 chr5 148108481 148108779 -54976753 + AluSx SINE Alu 1 296 -16 1273 197 124 135 chr5 148109030 148109578 -54975954 - MLT1F LTR MaLR 0 542 1 2045 124 17 7 chr5 148110542 148110841 -54974691 + AluSx SINE Alu 7 308 -4 26 64 0 0 chr5 148111361 148111408 -54974124 + AT_rich Low_complexity Low_complexity 1 47 0 826 243 84 4 chr5 148111479 148111705 -54973827 - MIR SINE MIR -1 261 18 249 302 36 43 chr5 148112372 148112511 -54973021 + L2 LINE L2 564 701 -2613 334 244 138 19 chr5 148112518 148112678 -54972854 - MER112 DNA MER1_type -10 250 72 438 304 193 20 chr5 148112774 148113214 -54972318 + L2 LINE L2 1867 2382 -932 8634 97 35 6 chr5 148113408 148114672 -54970860 + HSMAR2 DNA Mariner 2 1302 0 24 32 0 0 chr5 148115056 148115087 -54970445 + AT_rich Low_complexity Low_complexity 1 31 0 2279 107 0 0 chr5 148116344 148116643 -54968889 - AluSx SINE Alu -13 299 1 422 246 28 78 chr5 148116651 148116830 -54968702 - MER5B DNA MER1_type -5 173 4 1903 170 39 0 chr5 148117303 148117638 -54967894 - MER7A DNA MER2_type 0 346 1 2207 209 23 19 chr5 148118194 148118678 -54966854 - L1MD2 LINE L1 -24 6335 5850 343 254 109 16 chr5 148119374 148119535 -54965997 - MIR3 SINE MIR -70 192 2 883 172 46 0 chr5 148119961 148120112 -54965420 - FAM SINE Alu -17 158 1 233 267 0 0 chr5 148120285 148120330 -54965202 + L2 LINE L2 3208 3252 -61 271 217 0 0 chr5 148120414 148120460 -54965072 - L2 LINE L2 -18 3254 3209 1394 216 90 100 chr5 148120608 148120938 -54964594 + L1ME1 LINE L1 4913 5245 -921 1709 176 36 3 chr5 148120938 148121239 -54964293 + AluJo SINE Alu 2 312 0 1394 216 90 100 chr5 148121239 148121720 -54963812 + L1ME1 LINE L1 5245 5737 -429 * 2504 39 2 4 chr5 148121705 148121723 -54963809 + L1P2 LINE L1 5122 5139 -1015 4831 38 0 7 chr5 148121723 148122304 -54963228 - L1PA5 LINE L1 -4 6150 5574 2504 39 2 4 chr5 148122304 148122732 -54962800 + L1PA5 LINE L1 5139 5565 -589 1634 195 78 52 chr5 148122727 148122835 -54962697 + L1ME1 LINE L1 5725 5829 -337 * 2505 75 0 10 chr5 148122835 148123140 -54962392 + AluSp SINE Alu 2 303 -10 1634 195 78 52 chr5 148123140 148123457 -54962075 + L1ME1 LINE L1 5829 6161 -5 189 328 333 6 chr5 148123475 148123649 -54961883 + MIR SINE MIR 20 250 -12 199 224 0 61 chr5 148124394 148124443 -54961089 - MIR3 SINE MIR -7 201 156 * 452 198 0 12 chr5 148124436 148124517 -54961015 - L2 LINE L2 -2 3270 3191 2127 73 3 66 chr5 148125413 148125736 -54959796 + AluSp SINE Alu 3 306 0 22 0 0 0 chr5 148125854 148125876 -54959656 + AT_rich Low_complexity Low_complexity 1 22 0 334 266 106 26 chr5 148126013 148126126 -54959406 + L2 LINE L2 3151 3272 0 1067 101 134 14 chr5 148126546 148126755 -54958777 + L1MA8 LINE L1 6058 6291 0 430 223 16 16 chr5 148127000 148127121 -54958411 + L1ME4a LINE L1 5764 5884 -237 2273 104 16 7 chr5 148128002 148128310 -54957222 + AluSq SINE Alu 1 311 -2 858 306 61 91 chr5 148128331 148128718 -54956814 - L2 LINE L2 -633 2681 2317 2497 68 0 16 chr5 148128718 148129028 -54956504 + AluSc SINE Alu 1 305 -4 858 306 61 91 chr5 148129028 148129245 -54956287 - L2 LINE L2 -997 2317 2095 225 241 142 85 chr5 148129320 148129345 -54956187 - MIR SINE MIR 0 262 240 1992 189 43 57 chr5 148129345 148129857 -54955675 + MLT1D LTR MaLR 1 505 0 225 241 142 85 chr5 148129857 148129972 -54955560 - MIR SINE MIR -22 240 114 344 273 128 31 chr5 148130011 148130238 -54955294 - L2 LINE L2 -1396 1918 1670 195 214 71 36 chr5 148130243 148130299 -54955233 + L2 LINE L2 3256 3313 0 569 180 22 22 chr5 148130645 148130784 -54954748 + L1MC2 LINE L1 6191 6329 -15 2129 129 54 14 chr5 148131374 148131724 -54953808 + THE1B LTR MaLR 1 364 0 11400 93 17 8 chr5 148131724 148133290 -54952242 + THE1B-int LTR MaLR 1 1580 0 2139 123 93 3 chr5 148133292 148133624 -54951908 + THE1B LTR MaLR 3 364 0 515 208 186 27 chr5 148133635 148133818 -54951714 - L1MC4 LINE L1 -132 7910 7699 607 211 14 79 chr5 148133840 148134019 -54951513 + MLT1E2 LTR MaLR 1 169 -336 583 200 55 0 chr5 148134026 148134136 -54951396 + L1MC1 LINE L1 6210 6325 -8 300 283 42 0 chr5 148134251 148134371 -54951161 - L1MEc LINE L1 -3918 2478 2354 345 209 20 54 chr5 148134391 148134539 -54950993 - L1MEc LINE L1 -5369 1027 885 524 167 48 8 chr5 148134624 148134750 -54950782 - L1M4 LINE L1 -2177 3969 3839 1295 236 77 6 chr5 148134770 148135096 -54950436 - L1MC4 LINE L1 -326 7716 7368 1386 181 0 0 chr5 148135098 148135324 -54950208 - AluJb SINE Alu -15 297 72 564 221 105 6 chr5 148135327 148135499 -54950033 - L1MC4 LINE L1 -683 7359 7171 6188 116 23 1 chr5 148135531 148136447 -54949085 + Tigger1 DNA MER2_type 70 1005 -1413 341 248 72 8 chr5 148136475 148136600 -54948932 - L1MC4 LINE L1 -870 7172 7040 440 193 44 44 chr5 148136701 148136836 -54948696 - L1MEc LINE L1 -2171 4044 3910 2340 233 86 6 chr5 148136849 148137545 -54947987 - L1MEc LINE L1 -3145 3070 2319 1362 202 54 23 chr5 148137564 148137955 -54947577 - L1MEc LINE L1 -5369 1027 625 705 286 78 24 chr5 148137969 148138340 -54947192 - L1MEc LINE L1 -4654 1742 1352 * 809 299 87 49 chr5 148138337 148138448 -54947084 - L1MEc LINE L1 -5219 990 885 2106 101 0 61 chr5 148138448 148138776 -54946756 + AluSg SINE Alu 1 308 -2 809 299 87 49 chr5 148138776 148139640 -54945892 - L1MEc LINE L1 -5324 885 20 268 313 141 43 chr5 148139722 148139978 -54945554 - L2 LINE L2 -6 3266 2986 297 306 183 9 chr5 148140082 148140301 -54945231 - L2 LINE L2 -511 2803 2547 1719 150 144 9 chr5 148141501 148141828 -54943704 - MSTA LTR MaLR 0 428 58 4963 165 108 1 chr5 148141834 148142729 -54942803 - MSTA-int LTR MaLR -660 991 1 2188 111 159 5 chr5 148142729 148143099 -54942433 - MSTA LTR MaLR 0 428 2 3825 265 175 28 chr5 148143103 148144797 -54940735 + L2 LINE L2 1065 3001 -312 3117 283 119 19 chr5 148144808 148145338 -54940194 - L2 LINE L2 -610 2704 2229 2058 131 7 7 chr5 148145338 148145635 -54939897 + AluSx SINE Alu 1 297 -15 3117 283 119 19 chr5 148145635 148146397 -54939135 - L2 LINE L2 -1085 2229 1282 243 0 0 0 chr5 148146752 148146779 -54938753 + (TG)n Simple_repeat Simple_repeat 2 28 0 641 213 0 8 chr5 148146908 148147035 -54938497 - FLAM_A SINE Alu -7 126 1 470 208 208 38 chr5 148147198 148147438 -54938094 + L1ME4a LINE L1 5838 6118 -3 21 0 0 0 chr5 148147419 148147440 -54938092 + AT_rich Low_complexity Low_complexity 1 21 0 * 231 246 62 15 chr5 148147848 148147913 -54937619 - MIR SINE MIR -40 222 155 808 170 0 61 chr5 148147913 148148078 -54937454 - AluJb SINE Alu -21 291 137 2396 76 0 19 chr5 148148088 148148402 -54937130 - AluSx SINE Alu -4 308 1 366 247 0 11 chr5 148148402 148148495 -54937037 - MIR SINE MIR -100 162 71 530 208 16 16 chr5 148150175 148150300 -54935232 + Charlie1 DNA MER1_type 102 226 -2535 526 183 61 9 chr5 148150308 148150423 -54935109 + Charlie1 DNA MER1_type 2636 2756 -5 1428 167 73 24 chr5 148150973 148151015 -54934517 - L1MB3 LINE L1 0 6183 6144 2415 66 0 0 chr5 148151015 148151304 -54934228 + AluY SINE Alu 1 289 -22 1428 167 73 24 chr5 148151304 148151590 -54933942 - L1MB3 LINE L1 -39 6144 5839 1928 137 20 66 chr5 148151593 148151943 -54933589 + MER1B DNA MER1_type 6 339 0 2766 166 32 10 chr5 148151943 148152442 -54933090 - L1MB3 LINE L1 -341 5842 5329 2441 87 0 3 chr5 148152442 148152742 -54932790 - AluSg SINE Alu -11 299 1 2766 166 32 10 chr5 148152742 148152765 -54932767 - L1MB3 LINE L1 -854 5329 5308 545 156 21 0 chr5 148152763 148152859 -54932673 - L1ME1 LINE L1 -5 6161 6064 * 2434 49 7 16 chr5 148152864 148153169 -54932363 - AluY SINE Alu -9 302 1 455 233 94 97 chr5 148153472 148153836 -54931696 + L1MC4 LINE L1 7301 7730 -303 1847 100 4 0 chr5 148153836 148154075 -54931457 + AluY SINE Alu 47 286 -25 455 233 94 97 chr5 148154075 148154247 -54931285 + L1MC4 LINE L1 7730 7901 -132 2305 73 31 0 chr5 148154509 148154826 -54930706 - AluSc SINE Alu 0 309 1 3075 142 73 25 chr5 148154925 148155473 -54930059 - MER6A DNA MER2_type -30 575 2 2384 88 0 0 chr5 148156203 148156499 -54929033 + AluSc SINE Alu 1 296 -13 316 290 58 36 chr5 148156602 148156740 -54928792 + L1ME LINE L1 5678 5818 -303 21 0 0 0 chr5 148157232 148157253 -54928279 + AT_rich Low_complexity Low_complexity 1 21 0 2469 71 0 0 chr5 148157471 148157765 -54927767 + AluSg SINE Alu 1 294 -16 3158 150 87 18 chr5 148157788 148158353 -54927179 - MER6A DNA MER2_type -1 604 1 611 156 0 0 chr5 148158580 148158676 -54926856 - FLAM_A SINE Alu -12 130 35 24 0 0 0 chr5 148158729 148158753 -54926779 + AT_rich Low_complexity Low_complexity 1 24 0 1993 137 3 0 chr5 148158753 148159037 -54926495 - AluSx SINE Alu -27 285 1 3257 188 47 9 chr5 148159046 148159744 -54925788 - L1MC3 LINE L1 0 7785 7061 2352 85 0 3 chr5 148159787 148160081 -54925451 - AluY SINE Alu -18 293 1 2885 112 42 23 chr5 148160204 148160679 -54924853 + L1MB2 LINE L1 5684 6167 -4 254 210 0 16 chr5 148160790 148160852 -54924680 + Charlie8 DNA MER1_type 81 141 -2276 198 0 0 0 chr5 148160853 148160875 -54924657 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1180 109 13 0 chr5 148160879 148161062 -54924470 - AluSg/x SINE Alu 0 310 126 471 248 23 15 chr5 148161064 148161197 -54924335 + Charlie8 DNA MER1_type 143 276 -2141 1300 177 18 4 chr5 148161228 148161454 -54924078 - AluJo SINE Alu -83 229 1 358 324 143 33 chr5 148162393 148162665 -54922867 + MLT1K LTR MaLR 90 391 -197 368 296 0 9 chr5 148162703 148162811 -54922721 + MLT1K LTR MaLR 481 587 -1 26 50 0 0 chr5 148163135 148163175 -54922357 + AT_rich Low_complexity Low_complexity 1 40 0 428 134 0 12 chr5 148164535 148164617 -54920915 - L1MA8 LINE L1 -4 6287 6207 180 206 222 0 chr5 148166127 148166190 -54919342 - L2 LINE L2 -1 3312 3236 350 242 42 0 chr5 148166600 148166695 -54918837 - L2 LINE L2 -22 3291 3193 27 49 0 0 chr5 148167202 148167243 -54918289 + AT_rich Low_complexity Low_complexity 1 41 0 1733 163 54 0 chr5 148167586 148167880 -54917652 + AluJo SINE Alu 1 310 -2 1787 174 0 17 chr5 148168047 148168345 -54917187 - AluJo SINE Alu -13 299 7 2104 143 0 7 chr5 148168352 148168681 -54916851 - AluSx SINE Alu 0 312 1 273 57 0 0 chr5 148168683 148168718 -54916814 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2207 102 0 3 chr5 148168718 148169001 -54916531 - AluY SINE Alu -27 284 3 754 215 0 0 chr5 148169005 148169135 -54916397 - FLAM_A SINE Alu -12 130 1 533 309 44 32 chr5 148169373 148169622 -54915910 - HERV16 LTR ERVL -2939 2057 1806 * 638 364 60 41 chr5 148169617 148170370 -54915162 - HERV16 LTR ERVL -3927 1837 1071 612 325 37 65 chr5 148170444 148170463 -54915069 - HERV16 LTR ERVL -4181 815 797 2226 218 135 26 chr5 148170463 148171180 -54914352 + LTR50 LTR ERVL 1 795 0 612 325 37 65 chr5 148171180 148171594 -54913938 - HERV16 LTR ERVL -4199 797 394 782 274 49 113 chr5 148172133 148172657 -54912875 + L1ME3 LINE L1 3410 3875 -2271 2346 93 3 0 chr5 148172657 148172957 -54912575 + AluSq SINE Alu 1 301 -12 782 274 49 113 chr5 148172957 148173166 -54912366 + L1ME3 LINE L1 3875 4096 -2050 440 268 174 0 chr5 148173176 148173314 -54912218 + MER91B DNA MER1_type 29 190 0 335 283 68 64 chr5 148173327 148173638 -54911894 + L1ME3 LINE L1 4105 4416 -1730 615 168 161 74 chr5 148173658 148173807 -54911725 + FRAM SINE Alu 4 165 -11 533 244 149 14 chr5 148173809 148174084 -54911448 + L1ME3 LINE L1 4406 4717 -1429 1884 162 0 7 chr5 148174086 148174413 -54911119 + AluSx SINE Alu 1 325 0 1084 152 66 33 chr5 148174485 148174696 -54910836 + MER20 DNA MER1_type 1 218 -1 986 271 90 44 chr5 148174765 148175244 -54910288 - LTR33 LTR ERVL -16 505 5 1138 267 70 20 chr5 148175253 148175848 -54909684 + L1ME3 LINE L1 5083 5714 -456 1095 127 44 48 chr5 148175846 148175958 -54909574 - L1MC3 LINE L1 0 7785 7674 * 2037 118 26 23 chr5 148175958 148176263 -54909269 - AluSg SINE Alu -4 306 1 1095 127 44 48 chr5 148176263 148176378 -54909154 - L1MC3 LINE L1 -111 7674 7559 2203 103 0 35 chr5 148176422 148176734 -54908798 + AluSq SINE Alu 1 301 -12 480 279 10 24 chr5 148176740 148176948 -54908584 + L1ME3 LINE L1 5743 5947 -223 21 0 0 0 chr5 148176970 148176991 -54908541 + AT_rich Low_complexity Low_complexity 1 21 0 290 211 143 31 chr5 148177019 148177180 -54908352 + L1ME3 LINE L1 5963 6141 -21 418 214 65 52 chr5 148177810 148177964 -54907568 - L2 LINE L2 0 3313 3158 415 318 61 0 chr5 148178016 148178164 -54907368 + MIR SINE MIR 29 185 -77 * 893 254 118 16 chr5 148178161 148178703 -54906829 - L2 LINE L2 0 3313 2689 1973 155 0 0 chr5 148178703 148178994 -54906538 - AluJb SINE Alu -20 292 2 893 254 118 16 chr5 148178994 148179104 -54906428 - L2 LINE L2 -624 2689 2592 200 132 0 26 chr5 148180704 148180742 -54904790 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 1648 170 26 22 chr5 148180808 148181119 -54904413 - AluJb SINE Alu 0 312 1 361 267 15 30 chr5 148181536 148181591 -54903941 - MIR SINE MIR -67 195 141 2211 90 45 53 chr5 148181591 148181969 -54903563 - THE1C LTR MaLR 0 375 1 361 267 15 30 chr5 148181969 148182044 -54903488 - MIR SINE MIR -121 141 67 518 234 85 0 chr5 148182339 148182373 -54903159 - L1MA10 LINE L1 -10 6324 6291 994 233 37 20 chr5 148182373 148182593 -54902939 - L1ME2 LINE L1 -46 6118 5890 2291 107 13 0 chr5 148182593 148182901 -54902631 - AluSx SINE Alu 0 312 1 994 233 37 20 chr5 148182901 148182980 -54902552 - L1ME2 LINE L1 -274 5890 5814 2758 193 118 30 chr5 148182988 148183520 -54902012 - L1ME1 LINE L1 -15 6151 5539 1725 143 65 17 chr5 148183520 148183813 -54901719 + AluJb SINE Alu 1 307 -5 2758 193 118 30 chr5 148183813 148183991 -54901541 - L1ME1 LINE L1 -627 5539 5378 620 122 57 0 chr5 148183975 148184098 -54901434 - L1MDa LINE L1 -3988 2552 2423 * 410 240 0 0 chr5 148184095 148184191 -54901341 - L1ME1 LINE L1 -793 5373 5278 * 1433 128 0 0 chr5 148184191 148184387 -54901145 + AluSx SINE Alu 1 196 -116 1619 218 176 22 chr5 148184495 148185005 -54900527 + MLT1G LTR MaLR 1 589 -1 1071 157 17 6 chr5 148185051 148185223 -54900309 + MER20 DNA MER1_type 3 176 -43 221 280 56 28 chr5 148185777 148185884 -54899648 + L2 LINE L2 3162 3271 -1 2269 106 3 0 chr5 148186189 148186490 -54899042 + AluSx SINE Alu 1 302 -10 821 195 60 32 chr5 148187553 148187738 -54897794 + MER3 DNA MER1_type 20 209 0 2172 117 17 0 chr5 148188559 148188857 -54896675 + AluSx SINE Alu 1 303 -9 966 114 12 6 chr5 148191039 148191205 -54894327 + (GAAA)n Simple_repeat Simple_repeat 3 169 0 5176 211 83 32 chr5 148191207 148192520 -54893012 - L1ME1 LINE L1 -879 5267 3869 2172 128 3 0 chr5 148192520 148192817 -54892715 - AluSq SINE Alu -15 298 1 5176 211 83 32 chr5 148192817 148192989 -54892543 - L1ME1 LINE L1 -2277 3869 3707 997 167 126 10 chr5 148192989 148193187 -54892345 - MSTD LTR MaLR 0 396 176 314 240 22 95 chr5 148193199 148193378 -54892154 - L1M4 LINE L1 -2140 4006 3841 8099 10 0 0 chr5 148193378 148194892 -54890640 - L1PA2 LINE L1 0 6155 4643 207 273 200 40 chr5 148196076 148196226 -54889306 - MIR SINE MIR -17 245 72 21 36 0 0 chr5 148196684 148196712 -54888820 + GC_rich Low_complexity Low_complexity 1 28 0 842 137 91 5 chr5 148196987 148197207 -54888325 - L1M4 LINE L1 -4584 1842 1514 2014 116 21 0 chr5 148197274 148197559 -54887973 - AluSx SINE Alu -1 311 21 4772 128 110 3 chr5 148197604 148198498 -54887034 - L1PA16 LINE L1 -6 6160 5176 745 121 160 27 chr5 148198493 148198698 -54886834 - L1M4 LINE L1 -4832 1492 1255 * 772 177 44 13 chr5 148198731 148198889 -54886643 + FAM SINE Alu 1 163 -12 200 194 0 0 chr5 148198891 148198927 -54886605 + (TATG)n Simple_repeat Simple_repeat 1 36 0 180 179 0 0 chr5 148198952 148198991 -54886541 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 315 22 0 chr5 148199001 148199090 -54886442 - MIR SINE MIR -92 170 80 273 298 171 25 chr5 148200987 148201145 -54884387 + MIR SINE MIR 72 252 -10 215 376 12 0 chr5 148201159 148201244 -54884288 - L2 LINE L2 -14 3299 3214 439 241 97 56 chr5 148201381 148201576 -54883956 - Charlie8 DNA MER1_type -2214 203 1 196 51 26 26 chr5 148253485 148253524 -54832008 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 195 42 0 0 chr5 148253815 148253839 -54831693 + (A)n Simple_repeat Simple_repeat 1 24 0 1703 100 100 61 chr5 148254170 148254449 -54831083 + AluSx SINE Alu 1 290 -22 1837 166 7 0 chr5 148254476 148254760 -54830772 - AluJb SINE Alu -26 286 1 432 258 22 22 chr5 148254760 148254938 -54830594 + L1MEc LINE L1 1849 2026 -4370 320 0 25 0 chr5 148254943 148254983 -54830549 + (CA)n Simple_repeat Simple_repeat 2 42 0 2174 208 104 35 chr5 148254983 148255553 -54829979 + L1MEc LINE L1 2179 2783 -3432 1660 188 7 0 chr5 148255553 148255835 -54829697 - AluJo SINE Alu -22 290 7 2174 208 104 35 chr5 148255835 148256045 -54829487 + L1MEc LINE L1 2783 2977 -3238 828 122 0 0 chr5 148256045 148256160 -54829372 + AluJb SINE Alu 1 115 -197 366 121 0 121 chr5 148256436 148256568 -54828964 + FLAM_C SINE Alu 18 133 0 231 146 0 185 chr5 148256880 148257031 -54828501 - FLAM_C SINE Alu -6 127 5 709 265 115 61 chr5 148257041 148257546 -54827986 + L2 LINE L2 2329 2860 -454 1208 146 0 45 chr5 148257595 148257794 -54827738 - MER1B DNA MER1_type -1 338 149 1952 199 123 57 chr5 148257794 148258024 -54827508 - LTR1B LTR ERV1 0 826 613 2816 7 0 3 chr5 148258024 148258325 -54827207 - AluYa5 SINE Alu -11 300 1 1952 199 123 57 chr5 148258325 148258743 -54826789 - LTR1B LTR ERV1 -213 613 135 247 193 67 0 chr5 148258877 148258996 -54826536 + (TG)n Simple_repeat Simple_repeat 2 128 0 362 257 40 0 chr5 148259239 148259340 -54826192 - AluJb SINE Alu -188 114 10 1765 150 52 7 chr5 148259373 148259660 -54825872 - AluSg SINE Alu -10 300 1 1308 87 15 39 chr5 148259660 148259782 -54825750 - LTR26B LTR ERV1 -330 201 84 2118 98 54 14 chr5 148259782 148260077 -54825455 + AluSg SINE Alu 1 307 -3 1308 87 15 39 chr5 148260077 148260160 -54825372 - LTR26B LTR ERV1 -447 84 1 907 251 66 48 chr5 148260160 148260268 -54825264 - L1M4 LINE L1 -2467 3679 3574 2495 65 7 10 chr5 148260268 148260575 -54824957 - AluY SINE Alu -5 306 1 907 251 66 48 chr5 148260575 148260921 -54824611 - L1M4 LINE L1 -2572 3574 3217 2481 80 0 0 chr5 148261009 148261310 -54824222 - AluSg SINE Alu -9 301 1 1386 151 17 4 chr5 148261374 148261613 -54823919 - AluSg/x SINE Alu -1 309 68 1906 138 0 13 chr5 148262290 148262594 -54822938 + AluSq SINE Alu 1 300 -13 2431 71 3 10 chr5 148262594 148262905 -54822627 + AluY SINE Alu 1 309 -2 2256 116 3 0 chr5 148263121 148263431 -54822101 + AluSq SINE Alu 1 311 -2 1941 160 3 10 chr5 148263696 148264009 -54821523 - AluSx SINE Alu -1 311 1 1739 216 80 62 chr5 148264020 148264099 -54821433 - MER21B LTR ERV1 -31 832 756 2095 124 3 0 chr5 148264099 148264397 -54821135 + AluSx SINE Alu 1 299 -13 1739 216 80 62 chr5 148264397 148264831 -54820701 - MER21B LTR ERV1 -107 756 310 1024 97 0 0 chr5 148264834 148264968 -54820564 - AluSp/q SINE Alu -9 304 171 2250 109 0 10 chr5 148265222 148265533 -54819999 + AluSx SINE Alu 1 308 -4 769 221 96 15 chr5 148266772 148266971 -54818561 + MER58A DNA MER1_type 1 215 -9 2257 105 0 7 chr5 148266989 148267295 -54818237 - AluSx SINE Alu -8 304 1 696 323 64 38 chr5 148267514 148268027 -54817505 + L1MC4a LINE L1 5414 5938 -228 1670 144 4 4 chr5 148268933 148269183 -54816349 + AluJo SINE Alu 5 254 -58 598 252 162 15 chr5 148271333 148271599 -54813933 - Charlie7 DNA MER1_type -330 2282 1978 307 169 13 13 chr5 148271714 148271791 -54813741 + (TA)n Simple_repeat Simple_repeat 1 77 0 2225 116 0 0 chr5 148271791 148272083 -54813449 - AluSg SINE Alu -18 292 1 1957 109 10 64 chr5 148272138 148272449 -54813083 - AluSq SINE Alu -11 302 9 21 0 0 0 chr5 148272489 148272510 -54813022 + AT_rich Low_complexity Low_complexity 1 21 0 204 97 0 0 chr5 148272546 148272577 -54812955 + (TG)n Simple_repeat Simple_repeat 1 31 0 409 300 210 10 chr5 148272593 148272883 -54812649 - Charlie7 DNA MER1_type -986 1626 1279 1648 162 0 72 chr5 148273361 148273682 -54811850 - AluJo SINE Alu -14 298 1 257 195 103 23 chr5 148273765 148273852 -54811680 + L2 LINE L2 3104 3197 -116 677 307 35 9 chr5 148274371 148274599 -54810933 - MIR SINE MIR -3 259 26 319 271 158 27 chr5 148274906 148275002 -54810530 + L1ME4a LINE L1 5638 5720 -401 2253 107 68 94 chr5 148275002 148275459 -54810073 + MER65A LTR ERV1 1 445 0 319 271 158 27 chr5 148275459 148275583 -54809949 + L1ME4a LINE L1 5720 5887 -234 192 279 197 0 chr5 148275823 148275884 -54809648 + L2 LINE L2 3196 3268 -4 1959 130 40 0 chr5 148276908 148277208 -54808324 + AluSx SINE Alu 1 312 0 810 117 86 0 chr5 148277830 148277958 -54807574 + MER85 DNA T2_type 1 139 0 2378 80 3 3 chr5 148278351 148278651 -54806881 + AluSx SINE Alu 1 300 -12 1287 162 81 0 chr5 148279025 148279259 -54806273 - AluSg SINE Alu -11 299 47 1206 77 6 0 chr5 148279297 148279453 -54806079 - AluY SINE Alu -8 303 147 847 134 0 0 chr5 148279612 148279731 -54805801 + FLAM_C SINE Alu 3 121 -22 2334 59 0 0 chr5 148280876 148281147 -54804385 + AluY SINE Alu 21 291 -20 1751 184 3 3 chr5 148281165 148281453 -54804079 + AluJb SINE Alu 1 288 -24 2282 99 3 0 chr5 148281461 148281755 -54803777 + AluSq SINE Alu 13 307 -6 675 132 0 9 chr5 148282142 148282248 -54803284 + HY1 scRNA scRNA 1 105 -7 2243 105 0 16 chr5 148282272 148282577 -54802955 + AluSx SINE Alu 3 302 -10 2326 88 3 0 chr5 148282579 148282873 -54802659 + AluSp SINE Alu 1 295 -18 3228 122 49 45 chr5 148282891 148283609 -54801923 + L1MB4 LINE L1 5411 6170 -1 1022 134 20 0 chr5 148283711 148283860 -54801672 + AluSc SINE Alu 135 286 -23 22 0 0 0 chr5 148283899 148283921 -54801611 + AT_rich Low_complexity Low_complexity 1 22 0 1861 162 7 0 chr5 148283924 148284214 -54801318 + AluSx SINE Alu 3 294 -18 2022 86 4 4 chr5 148285030 148285285 -54800247 - AluSc SINE Alu -20 289 35 1381 98 0 25 chr5 148286027 148286231 -54799301 + AluY SINE Alu 106 304 -7 2165 127 3 0 chr5 148286295 148286595 -54798937 + AluSx SINE Alu 1 301 -11 4193 193 43 73 chr5 148286670 148286960 -54798572 + Cheshire DNA MER1_type 948 1245 -1175 2270 112 0 0 chr5 148286960 148287254 -54798278 + AluSg SINE Alu 1 294 -16 4193 193 43 73 chr5 148287254 148287467 -54798065 + Cheshire DNA MER1_type 1245 1463 -957 2311 105 0 3 chr5 148287467 148287762 -54797770 - AluSp SINE Alu -19 294 1 2247 158 25 45 chr5 148287772 148288134 -54797398 - L1MB3 LINE L1 -2 6181 5830 2172 132 7 0 chr5 148288134 148288438 -54797094 - AluSx SINE Alu -6 306 1 2247 158 25 45 chr5 148288438 148288562 -54796970 - L1MB3 LINE L1 -353 5830 5705 4193 193 43 73 chr5 148288562 148288824 -54796708 + Cheshire DNA MER1_type 1472 1740 -680 2069 129 3 10 chr5 148288824 148289126 -54796406 - AluSx SINE Alu -12 300 1 4193 193 43 73 chr5 148289126 148289256 -54796276 + Cheshire DNA MER1_type 1740 1872 -548 2439 95 0 0 chr5 148289256 148289562 -54795970 - AluSc SINE Alu -3 306 1 4193 193 43 73 chr5 148289562 148289703 -54795829 + Cheshire DNA MER1_type 1872 1962 -458 2111 120 10 0 chr5 148289703 148289994 -54795538 - AluSx SINE Alu -18 294 1 4193 193 43 73 chr5 148289994 148290102 -54795430 + Cheshire DNA MER1_type 1962 2072 -348 2040 144 0 13 chr5 148290102 148290415 -54795117 - AluSx SINE Alu -3 309 1 747 161 17 0 chr5 148290481 148290599 -54794933 + BC200 scRNA scRNA 2 121 -79 463 186 41 83 chr5 148290618 148290691 -54794841 + Cheshire DNA MER1_type 2273 2339 -81 1990 159 0 3 chr5 148290691 148290992 -54794540 + AluSx SINE Alu 1 300 -12 463 186 41 83 chr5 148290992 148291063 -54794469 + Cheshire DNA MER1_type 2339 2411 -9 2324 99 0 10 chr5 148291065 148291379 -54794153 + AluSx SINE Alu 1 311 -1 915 150 43 32 chr5 148291380 148291567 -54793965 - MER41B LTR ERV1 -58 577 389 233 159 0 23 chr5 148291668 148291712 -54793820 + Alu SINE Alu 86 128 -5 180 0 0 0 chr5 148293106 148293126 -54792406 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 799 198 32 6 chr5 148293325 148293482 -54792050 + FAM SINE Alu 2 162 -13 1967 135 0 42 chr5 148293501 148293646 -54791886 + AluSx SINE Alu 1 128 -184 2096 112 49 0 chr5 148293646 148293931 -54791601 + AluSx SINE Alu 1 299 -13 1967 135 0 42 chr5 148293931 148294097 -54791435 + AluSx SINE Alu 128 299 -13 2674 52 0 0 chr5 148294143 148294451 -54791081 + AluY SINE Alu 1 308 -3 503 242 61 8 chr5 148294935 148295067 -54790465 + L1ME3A LINE L1 6027 6165 -5 223 320 107 20 chr5 148296085 148296235 -54789297 + L3b LINE CR1 1290 1452 -131 2011 118 11 7 chr5 148296427 148296707 -54788825 - AluSx SINE Alu -16 296 16 808 61 0 0 chr5 148297037 148297136 -54788396 - HY3 scRNA scRNA -2 99 1 2297 105 3 3 chr5 148297382 148297678 -54787854 + AluSx SINE Alu 1 296 -16 2112 142 0 0 chr5 148297719 148298022 -54787510 + AluJb SINE Alu 10 312 0 1105 122 117 10 chr5 148298345 148298541 -54786991 + MLT2B1 LTR ERVL 1 217 -303 2303 113 0 3 chr5 148298541 148298851 -54786681 - AluSx SINE Alu -3 309 1 1630 91 0 0 chr5 148298985 148299182 -54786350 - AluSg SINE Alu -111 199 3 871 152 36 0 chr5 148299186 148299324 -54786208 - AluJb SINE Alu -169 143 1 1576 181 92 108 chr5 148299328 148299489 -54786043 + L1MD3 LINE L1 7447 7609 -386 2003 116 28 7 chr5 148299489 148299773 -54785759 - AluSx SINE Alu -22 290 1 1576 181 92 108 chr5 148299773 148300157 -54785375 + L1MD3 LINE L1 7609 7983 -12 1792 168 32 0 chr5 148300453 148300738 -54784794 - AluJb SINE Alu -18 294 1 217 216 0 0 chr5 148302727 148302778 -54782754 + GA-rich Low_complexity Low_complexity 2 52 0 2210 95 3 33 chr5 148302965 148303270 -54782262 - AluSg SINE Alu -14 296 1 1812 117 0 82 chr5 148303804 148304120 -54781412 - AluSx SINE Alu -21 291 2 1676 111 8 8 chr5 148304722 148304956 -54780576 - AluSg/x SINE Alu -12 298 65 395 290 108 16 chr5 148305150 148305336 -54780196 - Charlie2 DNA MER1_type -2620 242 40 1601 128 0 0 chr5 148305418 148305637 -54779895 - AluSg/x SINE Alu -6 306 88 373 138 0 0 chr5 148305638 148305704 -54779828 - Alu SINE Alu -252 50 1 878 285 4 12 chr5 148305843 148306099 -54779433 + MIR SINE MIR 8 261 -1 2034 127 46 65 chr5 148306531 148306700 -54778832 + THE1B LTR MaLR 1 172 -192 2461 88 0 3 chr5 148306700 148307006 -54778526 + AluY SINE Alu 1 305 -6 2034 127 46 65 chr5 148307006 148307207 -54778325 + THE1B LTR MaLR 172 364 0 227 316 10 61 chr5 148307207 148307305 -54778227 + MIR SINE MIR 5 97 -165 1804 71 0 0 chr5 148307383 148307595 -54777937 + AluY SINE Alu 1 212 -99 2382 83 0 10 chr5 148307794 148308107 -54777425 + AluY SINE Alu 1 310 -1 2411 93 3 6 chr5 148308110 148308423 -54777109 + AluSp SINE Alu 1 312 -1 446 185 118 0 chr5 148308454 148308573 -54776959 + Charlie2 DNA MER1_type 2128 2260 -602 1961 149 4 0 chr5 148308574 148308855 -54776677 + AluSx SINE Alu 1 282 -30 657 187 0 0 chr5 148308928 148309035 -54776497 + FLAM_C SINE Alu 1 107 -36 2184 122 0 0 chr5 148309564 148309860 -54775672 + AluSx SINE Alu 1 296 -16 232 172 0 52 chr5 148309986 148310044 -54775488 + Charlie2 DNA MER1_type 2808 2862 0 746 150 9 0 chr5 148310090 148310203 -54775329 + FLAM_C SINE Alu 14 127 -16 2358 85 7 3 chr5 148310323 148310630 -54774902 + AluY SINE Alu 1 308 -3 1361 151 23 53 chr5 148310827 148311131 -54774401 + AluJb SINE Alu 1 295 -17 2279 99 0 17 chr5 148311167 148311491 -54774041 - AluSx SINE Alu 0 312 1 936 123 32 7 chr5 148311700 148311855 -54773677 - AluSx SINE Alu -153 159 1 1651 207 84 52 chr5 148311855 148312146 -54773386 - L1ME1 LINE L1 -53 6113 5798 2352 111 0 0 chr5 148312146 148312452 -54773080 - AluSg SINE Alu -4 306 1 1651 207 84 52 chr5 148312452 148312662 -54772870 - L1ME1 LINE L1 -368 5798 5596 878 227 48 48 chr5 148312662 148312935 -54772597 - AluJo SINE Alu -1 311 39 258 32 0 0 chr5 148313023 148313054 -54772478 + (TC)n Simple_repeat Simple_repeat 1 31 0 1143 156 0 0 chr5 148313055 148313228 -54772304 - AluJb SINE Alu -10 302 130 2124 115 0 7 chr5 148313243 148313531 -54772001 - AluSc SINE Alu -23 286 1 618 256 36 41 chr5 148313533 148313622 -54771910 - L1ME LINE L1 -345 5821 5733 2442 95 0 0 chr5 148313622 148313926 -54771606 - AluSc SINE Alu -5 304 1 618 256 36 41 chr5 148313926 148313994 -54771538 - L1ME LINE L1 -433 5733 5663 1848 172 17 3 chr5 148313994 148314290 -54771242 - AluJo SINE Alu -12 300 1 618 256 36 41 chr5 148314290 148314350 -54771182 - L1ME LINE L1 -503 5663 5604 1415 200 0 15 chr5 148314353 148314613 -54770919 + AluJb SINE Alu 13 268 -44 2334 88 16 0 chr5 148314661 148314968 -54770564 + AluSp SINE Alu 2 313 0 1294 217 45 26 chr5 148314969 148315280 -54770252 - L1ME LINE L1 -581 5585 5265 2500 77 0 0 chr5 148315280 148315580 -54769952 - AluY SINE Alu -11 300 1 1294 217 45 26 chr5 148315580 148315771 -54769761 - L1ME LINE L1 -901 5265 5079 1940 161 7 0 chr5 148315771 148316069 -54769463 + AluJb SINE Alu 1 300 -12 2325 107 3 0 chr5 148316078 148316386 -54769146 + AluSx SINE Alu 2 310 -2 489 183 0 52 chr5 148316426 148316541 -54768991 - FLAM_A SINE Alu -8 134 26 1951 166 7 0 chr5 148316562 148316858 -54768674 - AluSx SINE Alu -14 298 1 3435 226 57 53 chr5 148316869 148317240 -54768292 - L1ME LINE L1 -1112 5034 4666 1939 112 36 36 chr5 148317240 148317545 -54767987 + AluSx SINE Alu 1 305 -7 3435 226 57 53 chr5 148317545 148317763 -54767769 - L1ME LINE L1 -1480 4666 4450 1991 120 39 0 chr5 148317763 148318046 -54767486 - AluSx SINE Alu -18 294 1 1570 150 116 8 chr5 148318048 148318315 -54767217 - AluSg1 SINE Alu -13 296 1 3435 226 57 53 chr5 148318315 148318420 -54767112 - L1ME LINE L1 -1696 4450 4347 1904 112 16 33 chr5 148318420 148318723 -54766809 + AluSx SINE Alu 15 312 0 3435 226 57 53 chr5 148318723 148319207 -54766325 - L1ME LINE L1 -1799 4347 3843 2477 75 7 0 chr5 148319207 148319512 -54766020 + AluSp SINE Alu 1 307 -6 3435 226 57 53 chr5 148319512 148319673 -54765859 - L1ME LINE L1 -2303 3843 3684 1981 170 45 0 chr5 148319678 148320008 -54765524 - LTR26B LTR ERV1 0 531 187 23 0 0 0 chr5 148320125 148320148 -54765384 + AT_rich Low_complexity Low_complexity 1 23 0 2161 102 7 23 chr5 148320153 148320456 -54765076 + AluSx SINE Alu 1 298 -14 1412 104 14 28 chr5 148320555 148320767 -54764765 - AluSg/x SINE Alu -18 294 86 505 239 8 16 chr5 148320816 148320972 -54764560 - L1MA10 LINE L1 -27 6298 5985 2406 77 0 7 chr5 148321021 148321331 -54764201 - AluSg1 SINE Alu 0 309 2 2125 120 7 0 chr5 148321364 148321656 -54763876 + AluSq SINE Alu 1 294 -19 346 185 0 0 chr5 148321675 148321740 -54763792 + L1M4 LINE L1 2300 2364 -3782 1942 170 0 0 chr5 148321743 148322054 -54763478 + AluJb SINE Alu 1 311 -1 2426 58 0 7 chr5 148322660 148322983 -54762549 - AluY SINE Alu 0 311 1 446 300 157 20 chr5 148323410 148323767 -54761765 - L1ME4a LINE L1 -13 6108 5703 2584 58 0 0 chr5 148323773 148324082 -54761450 + AluY SINE Alu 1 309 -2 3386 192 45 65 chr5 148324306 148324772 -54760760 + L1M4 LINE L1 2419 2893 -3253 2223 112 0 3 chr5 148324772 148325067 -54760465 - AluSc SINE Alu -15 294 1 3386 192 45 65 chr5 148325067 148325569 -54759963 + L1M4 LINE L1 2893 3366 -2780 1605 171 21 14 chr5 148325569 148325849 -54759683 + AluJo SINE Alu 1 282 -30 3386 192 45 65 chr5 148325849 148325932 -54759600 + L1M4 LINE L1 3366 3449 -2697 1445 160 99 15 chr5 148325939 148326201 -54759331 + AluJb SINE Alu 5 288 -24 7644 48 2 36 chr5 148326206 148327802 -54757730 + SVA Other Other 1 1386 0 2227 112 0 3 chr5 148327806 148328109 -54757423 + AluSc SINE Alu 1 302 -7 2239 129 0 0 chr5 148328128 148328439 -54757093 + AluSx SINE Alu 1 311 -1 922 247 10 5 chr5 148328605 148328799 -54756733 + MLT1F LTR MaLR 1 195 -347 1382 203 3 28 chr5 148328799 148328945 -54756587 - AluJo SINE Alu -33 279 142 2285 107 3 0 chr5 148328945 148329243 -54756289 - AluSq SINE Alu -14 299 1 1382 203 3 28 chr5 148329243 148329382 -54756150 - AluJo SINE Alu -170 142 1 3427 157 16 92 chr5 148329382 148329430 -54756102 - L1MB8 LINE L1 -105 6073 6023 1923 119 87 3 chr5 148329430 148329716 -54755816 + AluSp SINE Alu 1 310 -3 3427 157 16 92 chr5 148329716 148330285 -54755247 - L1MB8 LINE L1 -155 6023 5527 2500 152 23 19 chr5 148330285 148330712 -54754820 + MSTB1 LTR MaLR 4 432 0 3427 157 16 92 chr5 148330712 148330889 -54754643 - L1MB8 LINE L1 -651 5527 5338 1995 152 0 13 chr5 148330892 148331208 -54754324 + AluSx SINE Alu 1 312 0 2020 105 11 0 chr5 148331234 148331511 -54754021 - AluSx SINE Alu -1 311 32 2198 120 7 0 chr5 148331524 148331823 -54753709 - AluSg SINE Alu -9 301 1 2128 104 7 13 chr5 148331847 148332169 -54753363 - AluSx SINE Alu 0 312 2 2336 114 9 0 chr5 148332662 148333004 -54752528 - MER41B LTR ERV1 -290 345 1 968 140 0 0 chr5 148333043 148333186 -54752346 - AluSg/x SINE Alu -12 298 156 2702 130 14 28 chr5 148333186 148333425 -54752107 - MSTA LTR MaLR -1 427 195 2046 149 3 0 chr5 148333425 148333721 -54751811 - AluSx SINE Alu -15 297 1 2702 130 14 28 chr5 148333721 148333912 -54751620 - MSTA LTR MaLR -233 195 3 394 209 0 0 chr5 148333977 148334044 -54751488 + MLT1D LTR MaLR 1 67 -438 1611 174 46 0 chr5 148334060 148334342 -54751190 - AluJb SINE Alu -17 295 1 2081 123 6 29 chr5 148334352 148334668 -54750864 - AluSq SINE Alu -4 309 1 291 182 0 132 chr5 148334670 148334791 -54750741 + MLT1D LTR MaLR 58 162 -464 1344 90 0 0 chr5 148334815 148334981 -54750551 - AluY SINE Alu -13 298 133 2331 94 0 0 chr5 148334981 148335278 -54750254 - AluY SINE Alu -14 297 1 34 0 0 0 chr5 148335278 148335312 -54750220 + AT_rich Low_complexity Low_complexity 1 34 0 1224 219 34 4 chr5 148335319 148335612 -54749920 + MLT1D LTR MaLR 219 505 0 804 235 97 7 chr5 148335613 148335641 -54749891 + MER110A LTR ERV1 210 234 -257 2341 89 0 7 chr5 148335641 148335934 -54749598 + AluSq SINE Alu 1 291 -22 804 235 97 7 chr5 148335934 148336131 -54749401 + MER110A LTR ERV1 234 453 -38 1562 98 0 10 chr5 148336131 148336335 -54749197 - AluSg/x SINE Alu -11 299 98 804 235 97 7 chr5 148336335 148336378 -54749154 + MER110A LTR ERV1 453 491 0 267 267 27 0 chr5 148336378 148336453 -54749079 + L2 LINE L2 3237 3313 0 294 196 0 0 chr5 148336569 148336620 -54748912 + L1ME1 LINE L1 5671 5721 -612 2267 184 3 20 chr5 148336675 148337075 -54748457 + L1ME1 LINE L1 5728 6280 -54 2262 105 3 0 chr5 148337075 148337371 -54748161 - AluSx SINE Alu -15 297 1 2267 184 3 20 chr5 148337371 148337424 -54748108 + L1ME1 LINE L1 6280 6332 -2 2046 146 3 3 chr5 148337472 148337767 -54747765 - AluSx SINE Alu -17 295 1 2339 110 0 0 chr5 148337823 148338131 -54747401 - AluSg SINE Alu -2 308 1 21 57 0 0 chr5 148338276 148338311 -54747221 + AT_rich Low_complexity Low_complexity 1 35 0 2172 120 0 0 chr5 148338347 148338639 -54746893 - AluSp SINE Alu -21 292 1 2493 54 0 3 chr5 148338887 148339181 -54746351 + AluY SINE Alu 1 293 -18 1221 164 5 23 chr5 148339422 148339642 -54745890 - AluJo SINE Alu -5 307 92 724 250 29 46 chr5 148339647 148339827 -54745705 + L1MC4a LINE L1 5684 5863 -258 1819 159 27 0 chr5 148339827 148340123 -54745409 - AluJb SINE Alu -8 304 1 724 250 29 46 chr5 148340123 148340271 -54745261 + L1MC4a LINE L1 5863 6012 -109 2127 115 3 3 chr5 148340476 148340780 -54744752 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 148341754 148341775 -54743757 + GC_rich Low_complexity Low_complexity 1 21 0 1433 112 0 39 chr5 148343461 148343666 -54741866 + AluSx SINE Alu 1 197 -115 701 130 0 81 chr5 148343666 148343789 -54741743 + AluSc SINE Alu 129 241 -68 1801 110 4 16 chr5 148343789 148344044 -54741488 - AluSg SINE Alu -58 252 1 2496 53 36 7 chr5 148344930 148345232 -54740300 + AluY SINE Alu 1 311 0 2404 72 14 0 chr5 148345566 148345857 -54739675 + AluSc SINE Alu 2 296 -13 1548 128 0 13 chr5 148346495 148346721 -54738811 - AluJb SINE Alu -6 306 84 979 185 75 112 chr5 148346834 148347223 -54738309 - L1MC5 LINE L1 -226 7735 7362 2073 138 10 6 chr5 148347223 148347534 -54737998 - AluSx SINE Alu 0 312 1 979 185 75 112 chr5 148347534 148347582 -54737950 - L1MC5 LINE L1 -599 7362 7314 42 36 0 0 chr5 148347583 148347639 -54737893 + AT_rich Low_complexity Low_complexity 1 56 0 1445 223 7 0 chr5 148347639 148347926 -54737606 - AluJo SINE Alu -23 289 1 929 139 0 0 chr5 148347937 148348074 -54737458 - AluSg/x SINE Alu 0 312 176 211 159 204 0 chr5 148548146 148548190 -54537342 + L2 LINE L2 3261 3313 0 230 261 49 78 chr5 148548447 148548543 -54536989 + MIR SINE MIR 79 171 -91 1904 139 40 91 chr5 148548543 148548938 -54536594 - THE1C LTR MaLR 0 375 1 230 261 49 78 chr5 148548938 148548983 -54536549 + MIR SINE MIR 171 216 -46 451 219 123 26 chr5 148549478 148549592 -54535940 + L2 LINE L2 3183 3307 -6 1932 119 14 0 chr5 148551198 148551484 -54534048 + AluSx SINE Alu 1 290 -22 1776 121 42 0 chr5 148551502 148551767 -54533765 - Tigger3(Golem) DNA MER2_type 0 3038 2763 211 185 19 19 chr5 148551767 148551821 -54533711 + (TA)n Simple_repeat Simple_repeat 1 54 0 330 213 46 74 chr5 148551868 148551976 -54533556 - L1MC4a LINE L1 -1889 5919 5815 1453 170 100 106 chr5 148551993 148552493 -54533039 + MLT1D LTR MaLR 1 497 -8 734 269 40 28 chr5 148552639 148552892 -54532640 + MER112 DNA MER1_type 5 260 0 547 194 29 109 chr5 148553112 148553230 -54532302 - L1MD2 LINE L1 -5 6354 6253 2106 114 3 0 chr5 148553230 148553519 -54532013 - AluSq SINE Alu -23 290 1 547 194 29 109 chr5 148553519 148553575 -54531957 - L1MD2 LINE L1 -106 6253 6194 2311 93 3 3 chr5 148553872 148554185 -54531347 + AluSp SINE Alu 1 313 0 1675 147 17 30 chr5 148555282 148555421 -54530111 + AluJo SINE Alu 1 140 -172 2240 97 0 0 chr5 148555421 148555721 -54529811 + AluSx SINE Alu 1 300 -12 1675 147 17 30 chr5 148555721 148555881 -54529651 + AluJo SINE Alu 140 296 -16 1939 106 53 0 chr5 148557031 148557313 -54528219 - AluSx SINE Alu -15 297 1 2800 205 92 35 chr5 148557745 148558237 -54527295 - L1MD2 LINE L1 -238 6121 5568 2294 85 0 0 chr5 148558237 148558531 -54527001 - AluY SINE Alu -17 294 1 2800 205 92 35 chr5 148558531 148558812 -54526720 - L1MD2 LINE L1 -791 5568 5304 295 271 79 38 chr5 148558923 148559155 -54526377 - L1MC4a LINE L1 -592 5570 5324 1751 138 0 34 chr5 148559195 148559399 -54526133 - AluSx SINE Alu 0 311 119 2176 105 105 20 chr5 148559399 148559743 -54525789 + THE1C LTR MaLR 1 373 -2 1751 138 0 34 chr5 148559743 148559859 -54525673 - AluSx SINE Alu -192 119 1 337 231 130 81 chr5 148559941 148560249 -54525283 - MLT1H LTR MaLR -23 526 130 342 259 134 69 chr5 148560364 148560611 -54524921 - MLT1H-int LTR MaLR -24 1711 1449 231 36 0 0 chr5 148560774 148560802 -54524730 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 271 176 44 44 chr5 148561310 148561378 -54524154 - MLT1H LTR MaLR -481 68 1 425 249 188 24 chr5 148561436 148561601 -54523931 - L1ME4a LINE L1 -211 5910 5719 236 288 170 20 chr5 148561601 148561754 -54523778 + MER104 DNA Tc2 4 179 -1 653 248 76 20 chr5 148561824 148562238 -54523294 - L1ME4a LINE L1 -645 5517 5083 430 267 99 0 chr5 148562257 148562388 -54523144 - MIR SINE MIR 0 262 119 438 199 135 35 chr5 148562398 148562539 -54522993 + MLT1D LTR MaLR 1 155 -350 352 211 163 84 chr5 148562891 148563081 -54522451 + MLT1D LTR MaLR 130 334 -171 291 288 157 29 chr5 148563094 148563343 -54522189 - L1M4 LINE L1 -768 5378 5162 1389 206 28 24 chr5 148563343 148563490 -54522042 - AluJo SINE Alu -14 288 138 1887 100 29 65 chr5 148563490 148563799 -54521733 - AluSx SINE Alu -14 298 1 1389 206 28 24 chr5 148563799 148563938 -54521594 - AluJo SINE Alu -164 138 1 291 288 157 29 chr5 148563938 148564133 -54521399 - L1M4 LINE L1 -984 5162 4877 340 287 133 43 chr5 148564141 148564629 -54520903 - L1M4 LINE L1 -1299 4847 4316 474 287 71 45 chr5 148564637 148565059 -54520473 - L1MC4a LINE L1 -979 5167 4735 387 245 102 92 chr5 148565074 148565270 -54520262 - HAL1 LINE L1 -1122 1385 1188 238 261 81 73 chr5 148565299 148565559 -54519973 - HAL1 LINE L1 -1422 1085 824 208 125 0 42 chr5 148565687 148565735 -54519797 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 4738 182 40 22 chr5 148566027 148566382 -54519150 - L1MB3 LINE L1 -7 6176 5829 1358 166 106 18 chr5 148566382 148566666 -54518866 - AluJo SINE Alu -2 310 2 4738 182 40 22 chr5 148566666 148566878 -54518654 - L1MB3 LINE L1 -354 5829 5622 2180 89 0 25 chr5 148566878 148567194 -54518338 - AluSg SINE Alu 0 310 3 4738 182 40 22 chr5 148567194 148568588 -54516944 - L1MB3 LINE L1 -561 5622 4179 461 287 15 150 chr5 148569344 148569564 -54515968 - L1MC/D LINE L1 -438 5683 5618 2129 112 3 13 chr5 148569564 148569867 -54515665 + AluSx SINE Alu 1 300 -12 461 287 15 150 chr5 148569867 148569980 -54515552 - L1MC/D LINE L1 -503 5618 5491 536 297 14 36 chr5 148570088 148570364 -54515168 - L1MB3 LINE L1 -2086 4060 3791 204 40 0 0 chr5 148570398 148570423 -54515109 + (TG)n Simple_repeat Simple_repeat 2 26 0 798 286 147 52 chr5 148570997 148571378 -54514154 - L1MB3 LINE L1 -2391 3755 3412 2115 111 0 20 chr5 148571378 148571676 -54513856 - AluSx SINE Alu -20 292 1 798 286 147 52 chr5 148571676 148572046 -54513486 - L1MB3 LINE L1 -2734 3412 2857 311 301 148 10 chr5 148572332 148572535 -54512997 - L1MEc LINE L1 -3912 2484 2254 1656 158 7 30 chr5 148572661 148572965 -54512567 - AluJb SINE Alu -15 297 1 321 336 219 37 chr5 148573105 148573620 -54511912 - HAL1b LINE L1 -613 1701 127 1897 126 24 3 chr5 148573689 148573982 -54511550 - AluSx SINE Alu -10 302 4 830 158 25 25 chr5 148574385 148574543 -54510989 + MER105 DNA DNA 1 158 -46 23 33 0 0 chr5 148577748 148577778 -54507754 + AT_rich Low_complexity Low_complexity 1 30 0 254 239 208 15 chr5 148579703 148579833 -54505699 + MIR SINE MIR 31 185 -77 329 217 123 38 chr5 148580743 148580849 -54504683 + MIR SINE MIR 33 147 -115 2175 84 7 0 chr5 148583931 148584252 -54501280 - AluSp SINE Alu 0 323 1 258 325 13 0 chr5 148584609 148584686 -54500846 + L2 LINE L2 344 421 -2893 327 232 95 53 chr5 148584742 148584932 -54500600 + L2 LINE L2 587 784 -2530 208 216 98 0 chr5 148585315 148585366 -54500166 + L2 LINE L2 2329 2384 -930 224 351 45 15 chr5 148585385 148585519 -54500013 + L2 LINE L2 312 449 -2865 484 275 105 55 chr5 148586119 148586476 -54499056 + L1M4c LINE L1 1266 1799 -4764 2060 100 35 0 chr5 148586476 148586765 -54498767 - AluSx SINE Alu -13 299 1 484 275 105 55 chr5 148586765 148586833 -54498699 + L1M4c LINE L1 1799 1862 -4701 754 265 69 10 chr5 148588596 148588800 -54496732 - MER58A DNA MER1_type 0 224 9 289 286 120 22 chr5 148589352 148589511 -54496021 + MIR SINE MIR 34 205 -57 2184 84 0 59 chr5 148589855 148590176 -54495356 + AluSx SINE Alu 1 302 -10 302 231 157 33 chr5 148591550 148591671 -54493861 + L2 LINE L2 3168 3303 -10 6575 111 144 60 chr5 148593467 148594956 -54490576 + pTR5 LTR ERV1 743 2438 0 1507 199 10 3 chr5 148595259 148595556 -54489976 - AluJb SINE Alu -13 299 1 188 329 26 26 chr5 148595560 148595636 -54489896 - L3 LINE CR1 -75 1502 1427 239 329 0 12 chr5 148595732 148595817 -54489715 - L1ME4a LINE L1 -93 6028 5945 1122 265 82 23 chr5 148595988 148596501 -54489031 + L2 LINE L2 2515 3065 -248 192 299 120 40 chr5 148596643 148596849 -54488683 - L2 LINE L2 -2342 972 729 2143 112 27 56 chr5 148596849 148597224 -54488308 + THE1B LTR MaLR 1 364 0 192 299 120 40 chr5 148597224 148597341 -54488191 - L2 LINE L2 -2585 729 623 254 244 42 107 chr5 148597436 148597604 -54487928 - L2 LINE L2 -2902 412 256 2122 115 0 3 chr5 148597678 148597973 -54487559 + AluSx SINE Alu 1 294 -18 278 226 157 0 chr5 148598009 148598111 -54487421 - Tigger8 DNA MER2_type -211 455 338 180 235 0 0 chr5 148599063 148599097 -54486435 - L2 LINE L2 -18 3295 3262 1019 185 37 28 chr5 148599206 148599422 -54486110 - L1MB4 LINE L1 -23 6157 5940 4005 97 16 2 chr5 148599578 148600122 -54485410 + MER41A LTR ERV1 3 554 0 323 290 75 129 chr5 148600339 148600711 -54484821 + L2 LINE L2 2917 3268 -4 745 274 45 0 chr5 148601546 148601747 -54483785 + MIR SINE MIR 49 258 -4 429 205 24 0 chr5 148603468 148603551 -54481981 - L1 LINE L1 -1894 4252 4168 27517 105 8 10 chr5 148603556 148607559 -54477973 - L1P LINE L1 -2141 4005 11 2091 107 0 10 chr5 148607569 148607869 -54477663 - AluSx SINE Alu -15 297 1 2000 126 0 7 chr5 148607877 148608170 -54477362 - AluSx SINE Alu -21 291 1 27 29 0 0 chr5 148608180 148608214 -54477318 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 148609660 148609688 -54475844 + AT_rich Low_complexity Low_complexity 1 28 0 868 204 22 17 chr5 148609919 148610100 -54475432 - FRAM SINE Alu 0 176 1 1434 286 76 6 chr5 148610116 148610774 -54474758 - L1ME3A LINE L1 -310 5843 5148 679 282 63 57 chr5 148610840 148611004 -54474528 - L1ME3A LINE L1 -1338 4791 4630 1963 160 35 9 chr5 148611004 148611342 -54474190 + MER7A DNA MER2_type 2 346 0 679 282 63 57 chr5 148611342 148611439 -54474093 - L1ME3A LINE L1 -1499 4630 4535 2200 102 0 0 chr5 148611439 148611742 -54473790 - AluSq SINE Alu -10 303 1 679 282 63 57 chr5 148611742 148612199 -54473333 - L1ME3A LINE L1 -1594 4535 4011 1527 164 36 7 chr5 148612354 148612628 -54472904 + AluJb SINE Alu 1 282 -30 249 267 0 0 chr5 148612630 148612690 -54472842 - MLT1J1 LTR MaLR -261 185 126 633 200 0 0 chr5 148613087 148613197 -54472335 - FLAM_A SINE Alu -32 110 1 1611 170 3 25 chr5 148613202 148613520 -54472012 - AluJb SINE Alu -1 311 1 789 298 62 92 chr5 148613521 148614684 -54470848 - L1ME3A LINE L1 -2187 3942 2871 2201 95 3 0 chr5 148614684 148614979 -54470553 - AluSx SINE Alu -15 297 2 789 298 62 92 chr5 148614979 148615265 -54470267 - L1ME3A LINE L1 -3258 2871 2578 23 0 0 0 chr5 148615270 148615293 -54470239 + AT_rich Low_complexity Low_complexity 1 23 0 1382 135 15 75 chr5 148615293 148615559 -54469973 - AluSx SINE Alu -62 250 1 367 267 109 35 chr5 148615572 148615857 -54469675 - L1ME3A LINE L1 -3563 2566 2261 1870 158 28 14 chr5 148615874 148616235 -54469297 - L1MB7 LINE L1 -16 6168 5803 496 331 11 6 chr5 148616268 148616443 -54469089 - L1ME3A LINE L1 -5701 418 243 416 236 159 45 chr5 148616458 148616615 -54468917 - L1ME3A LINE L1 -5942 177 3 747 224 113 80 chr5 148616623 148617109 -54468423 - L1ME3A LINE L1 -5 6165 5664 307 351 0 9 chr5 148617109 148617220 -54468312 - L1ME3A LINE L1 -1224 4922 4813 38268 32 25 3 chr5 148617225 148622673 -54462859 - L1PA3 LINE L1 0 6470 893 654 36 0 0 chr5 148622640 148622736 -54462796 - L1PA3 LINE L1 -6081 380 10 * 464 271 15 35 chr5 148622739 148622853 -54462679 - L1ME3A LINE L1 -1324 4822 4712 1946 152 0 0 chr5 148622853 148623156 -54462376 - AluJb SINE Alu -9 303 1 464 271 15 35 chr5 148623156 148623240 -54462292 - L1ME3A LINE L1 -1434 4712 4628 1089 117 0 0 chr5 148623264 148623418 -54462114 + AluY SINE Alu 148 301 -10 1856 255 99 35 chr5 148623418 148623744 -54461788 - L1ME3A LINE L1 -1549 4597 4293 1386 169 85 0 chr5 148623744 148624016 -54461516 - AluJo SINE Alu -17 295 1 1856 255 99 35 chr5 148624016 148624713 -54460819 - L1ME3A LINE L1 -1853 4293 3509 4490 172 17 49 chr5 148624714 148625655 -54459877 - L1MD1 LINE L1 -14 6228 5316 2008 140 3 0 chr5 148625655 148625963 -54459569 - AluSx SINE Alu -1 311 3 4490 172 17 49 chr5 148625963 148625979 -54459553 - L1MD1 LINE L1 -926 5316 5301 618 282 133 30 chr5 148626116 148626481 -54459051 + L2 LINE L2 2632 2958 -355 222 37 0 0 chr5 148626481 148626508 -54459024 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 618 282 133 30 chr5 148626508 148626689 -54458843 + L2 LINE L2 2958 3307 -6 423 246 148 35 chr5 148627224 148627427 -54458105 + MIR SINE MIR 26 251 -11 741 218 129 5 chr5 148627828 148628030 -54457502 + MIR SINE MIR 2 228 -34 209 298 43 21 chr5 148631055 148631149 -54454383 + MIR SINE MIR 58 153 -55 225 171 0 0 chr5 148632787 148632822 -54452710 - L2 LINE L2 -13 3300 3266 204 289 94 71 chr5 148635287 148635553 -54449979 + L2 LINE L2 2924 3195 -77 189 307 27 40 chr5 148636000 148636075 -54449457 + L2 LINE L2 3230 3303 -10 1197 240 109 21 chr5 148636144 148636624 -54448908 + MER77 LTR ERV1 48 602 -3 192 294 71 59 chr5 148637191 148637276 -54448256 - L3b LINE CR1 -127 1456 1371 544 304 129 5 chr5 148637291 148637485 -54448047 + L1MC/D LINE L1 5521 5738 -2070 1939 128 3 13 chr5 148640136 148640440 -54445092 + AluJb SINE Alu 1 301 -11 204 239 0 0 chr5 148641734 148641780 -54443752 - L2 LINE L2 -25 3247 3202 257 183 17 0 chr5 148642075 148642135 -54443397 + (TAA)n Simple_repeat Simple_repeat 2 62 0 632 184 29 92 chr5 148642158 148642332 -54443200 - MIR SINE MIR -50 212 50 501 312 63 41 chr5 148643284 148643646 -54441886 - L3 LINE CR1 -8 1569 1200 217 295 225 8 chr5 148643692 148643821 -54441711 - L3 LINE CR1 -551 1026 870 283 333 47 8 chr5 148643878 148644007 -54441525 - MIR SINE MIR -94 168 35 235 278 72 52 chr5 148645303 148645400 -54440132 + L3b LINE CR1 1473 1571 -12 929 163 186 20 chr5 148646749 148647070 -54438462 + LOR1a LTR ERV1 79 497 0 224 276 82 45 chr5 148647655 148647789 -54437743 + MER5A DNA MER1_type 7 145 -44 * 245 222 210 0 chr5 148647776 148647857 -54437675 - MER5B DNA MER1_type -80 98 1 303 293 9 0 chr5 148648611 148648717 -54436815 + MIR SINE MIR 41 147 -61 457 318 15 76 chr5 148649522 148649786 -54435746 - MLT1K LTR MaLR -216 372 125 194 222 0 44 chr5 148650869 148650914 -54434618 + L2 LINE L2 3247 3289 -24 354 164 16 0 chr5 148652292 148652353 -54433179 + L2 LINE L2 3197 3258 -55 221 376 21 0 chr5 148652463 148652556 -54432976 - L2 LINE L2 -39 3233 3139 1233 203 8 23 chr5 148653546 148653812 -54431720 + MLT2B1 LTR ERVL 6 267 -253 282 301 168 0 chr5 148653982 148654095 -54431437 + MLT1J2 LTR MaLR 305 436 -14 218 222 40 101 chr5 148654197 148654296 -54431236 - L3 LINE CR1 -60 1517 1425 324 297 21 59 chr5 148654597 148654849 -54430683 - L2 LINE L2 -282 2990 2740 535 83 12 0 chr5 148654850 148654934 -54430598 - Alu SINE Alu -2 309 225 484 276 198 19 chr5 148654940 148655248 -54430284 - L2 LINE L2 -569 2745 2383 401 325 64 34 chr5 148656018 148656252 -54429280 + L1MEc LINE L1 1852 2092 -4304 840 258 45 8 chr5 148656263 148656649 -54428883 + L1MEc LINE L1 2122 2483 -3732 1041 222 77 16 chr5 148656691 148657002 -54428530 + L1MEc LINE L1 2598 2927 -3288 2700 275 134 59 chr5 148657007 148658214 -54427318 + L2 LINE L2 1109 2224 -1090 1888 179 94 40 chr5 148658214 148658693 -54426839 - MLT1D LTR MaLR 0 505 1 2700 275 134 59 chr5 148658693 148658918 -54426614 + L2 LINE L2 2224 2431 -883 1978 72 3 172 chr5 148658918 148659267 -54426265 - AluSq SINE Alu -23 290 1 2700 275 134 59 chr5 148659267 148659475 -54426057 + L2 LINE L2 2431 2873 -441 270 291 113 7 chr5 148660285 148660436 -54425096 + L2 LINE L2 1758 1924 -1390 1751 262 132 29 chr5 148660450 148661603 -54423929 + L2 LINE L2 2034 3313 0 317 318 103 16 chr5 148661617 148661928 -54423604 + L2 LINE L2 2001 2338 -976 364 279 63 30 chr5 148661966 148662114 -54423418 - MIR SINE MIR -75 133 3 200 333 0 0 chr5 148663067 148663124 -54422408 + L2 LINE L2 3123 3179 -93 485 277 65 7 chr5 148664148 148664303 -54421229 - MIR3 SINE MIR -25 183 20 206 302 35 0 chr5 148664358 148664444 -54421088 + CT-rich Low_complexity Low_complexity 2 90 0 324 0 0 0 chr5 148664509 148664545 -54420987 + (T)n Simple_repeat Simple_repeat 1 36 0 375 178 14 0 chr5 148666230 148666303 -54419229 + MER116 DNA Mariner 6 79 -1 217 260 39 39 chr5 148667461 148667538 -54417994 - MIR SINE MIR -116 92 16 418 311 109 21 chr5 148670297 148670490 -54415042 + L1MEc LINE L1 3163 3372 -2843 2020 158 0 3 chr5 148670565 148670875 -54414657 + AluJb SINE Alu 1 309 -3 315 342 91 15 chr5 148671021 148671363 -54414169 + L1MEc LINE L1 3683 4050 -2165 626 308 83 54 chr5 148671544 148671862 -54413670 + L1MEc LINE L1 4369 4705 -1510 1997 153 0 7 chr5 148671862 148672157 -54413375 + AluJb SINE Alu 2 294 -18 626 308 83 54 chr5 148672157 148672286 -54413246 + L1MEc LINE L1 4705 4829 -1386 258 289 144 0 chr5 148672407 148672511 -54413021 - L2 LINE L2 -11 3261 3143 387 186 49 20 chr5 148672853 148672955 -54412577 - MER5A DNA MER1_type -38 151 47 1053 241 189 35 chr5 148673243 148673703 -54411829 + L2 LINE L2 1 531 -2783 499 224 120 16 chr5 148673704 148673896 -54411636 + L2 LINE L2 1589 1800 -1514 2000 143 14 0 chr5 148674168 148674461 -54411071 - AluSx SINE Alu -15 297 1 204 276 132 0 chr5 148675026 148675102 -54410430 + MIR3 SINE MIR 111 196 -12 603 296 40 52 chr5 148677218 148677468 -54408064 - MIR SINE MIR -11 251 5 203 296 0 0 chr5 148677529 148677583 -54407949 - L2 LINE L2 -213 3059 3006 441 263 50 56 chr5 148677637 148677797 -54407735 + MIR SINE MIR 4 162 -100 2578 66 0 0 chr5 148678047 148678348 -54407184 - AluY SINE Alu -10 301 1 253 185 0 37 chr5 148681249 148681303 -54404229 + MER63 DNA MER1_type 1 52 -878 320 224 0 15 chr5 148681389 148681456 -54404076 + MER63 DNA MER1_type 976 1041 -20 510 262 16 0 chr5 148683173 148683295 -54402237 - MIR3 SINE MIR -38 170 47 345 265 23 96 chr5 148684892 148685085 -54400447 + MIR SINE MIR 22 198 -64 2055 141 3 0 chr5 148685149 148685439 -54400093 + AluSx SINE Alu 1 291 -21 534 302 132 5 chr5 148685441 148685646 -54399886 - MIR SINE MIR -27 235 5 197 277 21 0 chr5 148687153 148687200 -54398332 - L2 LINE L2 0 3313 3266 559 299 122 5 chr5 148687901 148688122 -54397410 + MIR SINE MIR 13 259 -3 230 214 0 0 chr5 148688220 148688262 -54397270 + CT-rich Low_complexity Low_complexity 4 45 0 335 252 24 16 chr5 148690715 148690838 -54394694 - L1ME4a LINE L1 -3 6118 5995 2709 43 0 0 chr5 148690994 148691296 -54394236 + AluY SINE Alu 1 302 -9 346 272 97 0 chr5 148691455 148691569 -54393963 + L2 LINE L2 2909 3033 -280 654 60 0 0 chr5 148691833 148691916 -54393616 + AluS SINE Alu 2 84 -228 603 123 0 0 chr5 148692481 148692603 -54392929 + (CA)n Simple_repeat Simple_repeat 2 123 0 924 276 192 21 chr5 148692764 148693420 -54392112 - L2 LINE L2 -1105 2209 1442 803 251 28 24 chr5 148693450 148693661 -54391871 + MER20 DNA MER1_type 2 213 -6 269 262 0 0 chr5 148696907 148696968 -54388564 - MIR SINE MIR -63 145 85 330 320 126 19 chr5 148698173 148698345 -54387187 + L1ME4a LINE L1 5635 5787 -334 2599 58 0 13 chr5 148698345 148698655 -54386877 + AluY SINE Alu 1 306 -5 1248 50 0 19 chr5 148698497 148698657 -54386875 + AluY SINE Alu 152 308 -3 330 320 126 19 chr5 148698655 148698791 -54386741 + L1ME4a LINE L1 5787 5976 -145 * 842 182 163 4 chr5 148702584 148702842 -54382690 - MER33 DNA MER1_type -1 323 25 726 169 0 125 chr5 148704347 148704426 -54381106 - MER45A DNA AcHobo -1404 177 90 2001 117 0 7 chr5 148704426 148704707 -54380825 + AluSx SINE Alu 1 279 -33 726 169 0 125 chr5 148704707 148704724 -54380808 - MER45A DNA AcHobo -1491 90 72 2227 112 0 0 chr5 148704724 148705029 -54380503 + AluSq SINE Alu 1 305 -8 726 169 0 125 chr5 148705029 148705115 -54380417 - MER45A DNA AcHobo -1508 73 17 283 305 84 0 chr5 148705127 148705222 -54380310 - MIR SINE MIR -62 200 98 946 278 113 48 chr5 148706149 148706476 -54379056 + L1ME3A LINE L1 5623 5996 -174 2096 112 10 13 chr5 148706476 148706780 -54378752 + AluSx SINE Alu 1 303 -9 946 278 113 48 chr5 148706780 148706967 -54378565 + L1ME3A LINE L1 5996 6170 0 198 322 104 9 chr5 148708258 148708373 -54377159 - MIR3 SINE MIR -15 193 68 1878 147 71 37 chr5 148708597 148708923 -54376609 + MER1B DNA MER1_type 1 337 0 1036 246 123 47 chr5 148709170 148709593 -54375939 + MLT1C LTR MaLR 6 460 -7 191 339 23 31 chr5 148710182 148710312 -54375220 + L2 LINE L2 2827 2955 -317 387 300 15 23 chr5 148710399 148710529 -54375003 + L2 LINE L2 3138 3266 -6 443 257 125 0 chr5 148710815 148710967 -54374565 - MIR SINE MIR 0 262 92 182 319 0 0 chr5 148711331 148711378 -54374154 - MIR SINE MIR -129 79 33 332 264 27 27 chr5 148711587 148711697 -54373835 - L2 LINE L2 -225 3047 2938 336 24 0 0 chr5 148712686 148712727 -54372805 + (TG)n Simple_repeat Simple_repeat 1 41 0 2066 153 137 8 chr5 148713187 148713566 -54371966 - MSTA LTR MaLR 0 428 1 751 264 72 0 chr5 148715588 148715781 -54369751 + MIR SINE MIR 46 252 -10 250 114 0 0 chr5 148716122 148716166 -54369366 - L2 LINE L2 -213 3059 3016 2495 57 0 0 chr5 148716553 148716851 -54368681 + AluY SINE Alu 1 298 -13 201 298 111 55 chr5 148717137 148717372 -54368160 + L2 LINE L2 2848 3095 -218 379 248 124 0 chr5 148717467 148717596 -54367936 + MIR SINE MIR 118 262 0 238 267 0 33 chr5 148717623 148717683 -54367849 + MIR SINE MIR 58 115 -147 806 264 6 0 chr5 148720820 148720994 -54364538 + MER58A DNA MER1_type 37 211 -13 1163 269 62 38 chr5 148722903 148723323 -54362209 + MLT1J2 LTR MaLR 3 432 -18 271 222 16 0 chr5 148723798 148723861 -54361671 + MIR SINE MIR 106 169 -93 4935 256 116 11 chr5 148723909 148725724 -54359808 + L2 LINE L2 558 2564 -750 21 0 0 0 chr5 148727091 148727112 -54358420 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 148727311 148727349 -54358183 + AT_rich Low_complexity Low_complexity 1 38 0 201 351 13 0 chr5 148727795 148727872 -54357660 + CT-rich Low_complexity Low_complexity 3 80 0 24 32 0 0 chr5 148728514 148728545 -54356987 + AT_rich Low_complexity Low_complexity 1 31 0 789 302 34 24 chr5 148730308 148730603 -54354929 - LTR16C LTR ERVL -119 372 75 246 231 96 83 chr5 148730993 148731149 -54354383 + MIR SINE MIR 70 227 -35 352 269 74 0 chr5 148732390 148732498 -54353034 + L2 LINE L2 3145 3260 -12 413 277 18 0 chr5 148734805 148734917 -54350615 - MIR SINE MIR -64 144 31 274 278 56 0 chr5 148735104 148735194 -54350338 - MER5A DNA MER1_type -92 97 3 1351 291 101 27 chr5 148736971 148737141 -54348391 + MER20B DNA MER1_type 8 164 -619 2914 92 17 64 chr5 148737141 148737607 -54347925 - MLT2A1 LTR ERVL 0 444 1 1351 291 101 27 chr5 148737607 148738023 -54347509 + MER20B DNA MER1_type 164 637 -146 2387 140 50 0 chr5 148738024 148738424 -54347108 - MSTA LTR MaLR 0 428 9 389 125 0 28 chr5 148738504 148738576 -54346956 + MER20B DNA MER1_type 701 770 -13 270 73 0 0 chr5 148740784 148740825 -54344707 + (TC)n Simple_repeat Simple_repeat 1 41 0 207 125 0 0 chr5 148740828 148740868 -54344664 + (CA)n Simple_repeat Simple_repeat 1 40 0 233 245 49 49 chr5 148740984 148741086 -54344446 - MIR3 SINE MIR -1 207 106 620 227 49 11 chr5 148742232 148742417 -54343115 + L1ME3A LINE L1 5974 6165 -5 186 253 141 10 chr5 148746827 148746926 -54338606 + L2 LINE L2 2802 2913 -401 248 100 45 0 chr5 148747925 148747973 -54337559 + MIR SINE MIR 104 152 -62 191 398 35 0 chr5 148748674 148748787 -54336745 + MER5B DNA MER1_type 60 176 -2 21 0 0 0 chr5 148749015 148749036 -54336496 + AT_rich Low_complexity Low_complexity 1 21 0 429 333 0 0 chr5 148749528 148749642 -54335890 + MIR SINE MIR 47 160 -102 277 304 104 20 chr5 148752541 148752742 -54332790 - HAL1 LINE L1 -590 1917 1700 1159 46 13 0 chr5 148752759 148752911 -54332621 - AluY SINE Alu -12 299 146 247 200 0 0 chr5 148752973 148753023 -54332509 - HAL1 LINE L1 -912 1595 1546 * 2855 79 10 0 chr5 148753022 148753413 -54332119 - L1PA8 LINE L1 -798 5348 4954 6351 65 4 2 chr5 148753413 148754213 -54331319 + L1PA8 LINE L1 5369 6172 0 1399 245 72 50 chr5 148754224 148754937 -54330595 - HAL1 LINE L1 -947 1560 833 1917 123 13 39 chr5 148755139 148755449 -54330083 - AluSx SINE Alu -10 302 1 251 287 202 0 chr5 148755569 148755698 -54329834 - MIR SINE MIR -13 249 95 255 274 14 0 chr5 148755699 148755772 -54329760 - MIR3 SINE MIR -21 187 114 608 281 52 5 chr5 148756494 148756686 -54328846 + MIR SINE MIR 61 261 -1 369 0 0 0 chr5 148757086 148757127 -54328405 + (TG)n Simple_repeat Simple_repeat 2 42 0 1295 285 55 26 chr5 148758353 148758845 -54326687 - MLT1J LTR MaLR -1 510 5 962 261 71 14 chr5 148758955 148759394 -54326138 - L1MEd LINE L1 -4834 1476 955 1987 145 0 0 chr5 148759394 148759698 -54325834 - AluSx SINE Alu -8 304 1 962 261 71 14 chr5 148759698 148759763 -54325769 - L1MEd LINE L1 -5355 955 895 886 222 55 1 chr5 148759831 148760046 -54325486 - L1PA16 LINE L1 0 6166 5941 305 217 0 17 chr5 148760051 148760111 -54325421 - L1MCa LINE L1 -4362 2064 2006 * 334 344 0 0 chr5 148760066 148760156 -54325376 + L1MC4 LINE L1 6614 6703 -1339 * 400 289 0 0 chr5 148760112 148760202 -54325330 - L1MC4 LINE L1 -1339 6703 6614 1247 188 0 0 chr5 148760210 148760423 -54325109 - AluJb SINE Alu -22 290 78 1858 109 12 21 chr5 148760423 148760710 -54324822 - L1PA16 LINE L1 -192 5974 5692 297 240 151 27 chr5 148760726 148760872 -54324660 - HAL1 LINE L1 0 2507 2344 530 285 53 35 chr5 148760898 148761126 -54324406 - HAL1 LINE L1 -223 2284 2053 340 306 89 7 chr5 148761807 148761948 -54323584 + MIR SINE MIR 26 184 -64 2152 89 0 3 chr5 148763166 148763485 -54322047 + AluSc SINE Alu 1 318 0 224 283 158 25 chr5 148763986 148764106 -54321426 - L2 LINE L2 -4 3268 3133 722 200 100 16 chr5 148765908 148766098 -54319434 - MLT1D LTR MaLR -279 226 21 1850 84 38 15 chr5 148766378 148766641 -54318891 - AluSx SINE Alu -4 308 40 274 280 0 0 chr5 148766996 148767071 -54318461 - L1ME LINE L1 -433 5688 5614 236 250 18 0 chr5 148767077 148767133 -54318399 + L2 LINE L2 3198 3254 -59 868 221 72 53 chr5 148767190 148767452 -54318080 + L1ME2 LINE L1 5850 6116 -48 182 230 60 143 chr5 148767505 148767722 -54317810 + L2 LINE L2 291 489 -2825 198 0 0 0 chr5 148768264 148768286 -54317246 + (T)n Simple_repeat Simple_repeat 1 22 0 2771 223 76 15 chr5 148769484 148770223 -54315309 + MER20B DNA MER1_type 1 784 0 234 0 0 0 chr5 148773026 148773052 -54312480 + (TAA)n Simple_repeat Simple_repeat 2 27 0 982 303 86 22 chr5 148773806 148774306 -54311226 + L2 LINE L2 2773 3311 -2 2140 209 67 30 chr5 148775829 148776337 -54309195 + MER77 LTR ERV1 53 579 -26 199 246 101 14 chr5 148776383 148776452 -54309080 - MIR SINE MIR -113 95 21 268 302 0 12 chr5 148777221 148777307 -54308225 - MIR3 SINE MIR -7 201 117 270 344 115 0 chr5 148779594 148779786 -54305746 - L3 LINE CR1 -17 1560 1347 291 306 48 0 chr5 148779830 148779954 -54305578 - L3 LINE CR1 -217 1360 1231 456 121 0 0 chr5 148780004 148780095 -54305437 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 192 394 11 0 chr5 148780125 148780219 -54305313 - L3 LINE CR1 -409 1168 1074 523 147 104 39 chr5 148780753 148780920 -54304612 + MLT1A2 LTR MaLR 1 204 -161 1630 184 39 36 chr5 148782366 148782725 -54302807 + MLT1A1 LTR MaLR 3 362 -3 217 264 0 19 chr5 148782797 148782850 -54302682 - L3 LINE CR1 -2 1575 1524 441 0 0 0 chr5 148783098 148783147 -54302385 + (TA)n Simple_repeat Simple_repeat 1 49 0 349 261 84 7 chr5 148783147 148783289 -54302243 + L1ME4a LINE L1 5969 6121 0 1016 294 36 44 chr5 148783757 148784281 -54301251 + L1ME3A LINE L1 4493 5012 -1134 3962 228 32 43 chr5 148784285 148784478 -54301054 + L1M4b LINE L1 4 198 -6661 1922 109 0 0 chr5 148784478 148784743 -54300789 + AluSx SINE Alu 38 302 -10 3962 228 32 43 chr5 148784743 148785465 -54300067 + L1M4b LINE L1 198 909 -5950 1622 270 68 44 chr5 148785435 148786240 -54299292 + L1M4b LINE L1 1748 2723 -4415 * 5313 230 53 52 chr5 148786233 148787627 -54297905 + L1MEc LINE L1 1731 3083 -3132 1935 104 41 0 chr5 148787627 148787924 -54297608 + AluSc SINE Alu 1 308 0 5313 230 53 52 chr5 148787924 148788844 -54296688 + L1MEc LINE L1 3083 4000 -2215 759 316 92 11 chr5 148788859 148789293 -54296239 + L1ME3A LINE L1 5492 5960 -210 323 192 14 14 chr5 148789762 148789835 -54295697 + MLT1I LTR MaLR 88 160 -249 349 281 79 9 chr5 148790095 148790209 -54295323 + MLT1I LTR MaLR 280 401 -8 311 291 8 47 chr5 148790675 148790802 -54294730 + GA-rich Low_complexity Low_complexity 6 127 0 403 318 135 21 chr5 148792758 148793047 -54292485 + L2 LINE L2 2950 3271 -1 542 325 10 14 chr5 148793795 148794048 -54291484 + MIR SINE MIR 9 260 -2 200 333 29 0 chr5 148795087 148795156 -54290376 + MIR SINE MIR 51 121 -141 265 294 72 44 chr5 148796094 148796274 -54289258 - HAL1 LINE L1 -824 1683 1499 519 250 0 0 chr5 148796299 148796407 -54289125 + LTR69 LTR ERVL 481 588 0 1049 259 162 39 chr5 148799393 148799865 -54285667 + L2 LINE L2 2784 3312 -1 391 343 20 40 chr5 148799867 148800065 -54285467 - L2 LINE L2 -570 2744 2551 305 264 64 27 chr5 148801170 148801280 -54284252 + L2 LINE L2 3197 3310 -3 287 248 124 9 chr5 148801902 148802007 -54283525 + MIR3 SINE MIR 49 165 -43 4782 114 95 21 chr5 148802010 148803389 -54282143 + pTR5 LTR ERV1 741 2606 0 211 336 21 49 chr5 148803556 148803699 -54281833 + L2 LINE L2 2957 3095 -177 241 309 24 12 chr5 148803740 148803824 -54281708 + MIR SINE MIR 29 113 -95 494 178 11 0 chr5 148804112 148804202 -54281330 - MIR SINE MIR -70 192 102 484 328 21 19 chr5 148806452 148806668 -54278864 - MIR SINE MIR -27 235 22 380 301 29 0 chr5 148807848 148807951 -54277581 - L2 LINE L2 -23 3249 3144 180 111 0 0 chr5 148810415 148810442 -54275090 + (A)n Simple_repeat Simple_repeat 1 27 0 262 250 0 0 chr5 148811568 148811624 -54273908 - MIR3 SINE MIR -6 202 147 754 238 172 33 chr5 148813735 148814038 -54271494 - L2 LINE L2 0 3313 2969 453 210 78 163 chr5 148814529 148814786 -54270746 - MIR SINE MIR -3 259 25 1022 259 58 77 chr5 148815633 148816101 -54269431 - LTR37B LTR ERV1 0 468 10 443 220 141 73 chr5 148816520 148816697 -54268835 + MIR SINE MIR 57 245 -17 186 216 59 0 chr5 148817737 148817788 -54267744 + MIR3 SINE MIR 119 172 -36 374 302 123 48 chr5 148819483 148820364 -54265168 + L1 LINE L1 4067 5013 -1133 337 261 92 6 chr5 148820598 148820782 -54264750 - L1ME2 LINE L1 -196 5968 5768 697 290 78 35 chr5 148821096 148821800 -54263732 - L1MEd LINE L1 -4728 1582 806 562 311 70 65 chr5 148821872 148822471 -54263061 - L1MEd LINE L1 -5427 692 91 2965 244 84 27 chr5 148823618 148824762 -54260770 + L1MC4 LINE L1 6458 7736 -166 229 317 75 19 chr5 148824863 148825024 -54260508 + L1ME2 LINE L1 17 186 -6237 781 286 36 34 chr5 148825026 148825494 -54260038 + L1ME2 LINE L1 1759 2227 -4895 2465 96 0 3 chr5 148825506 148825819 -54259713 + AluSx SINE Alu 1 312 0 523 262 79 18 chr5 148825860 148826200 -54259332 + L1ME2 LINE L1 3847 4207 -2734 709 242 14 69 chr5 148826225 148826514 -54259018 + L1ME2 LINE L1 5313 5585 -1356 466 189 88 27 chr5 148826559 148826574 -54258958 - L1MA10 LINE L1 -3 6331 6317 2184 200 17 63 chr5 148826574 148826948 -54258584 - L1ME1 LINE L1 -5 6161 5771 2263 114 23 0 chr5 148826948 148827247 -54258285 - AluSc SINE Alu -3 306 1 2184 200 17 63 chr5 148827247 148827743 -54257789 - L1ME1 LINE L1 -395 5771 5358 1831 190 84 22 chr5 148827723 148828223 -54257309 + L1ME2 LINE L1 6427 6957 -2 * 1469 256 52 57 chr5 148828584 148829179 -54256353 + MER45C DNA AcHobo 1 592 -361 267 254 0 0 chr5 148829189 148829244 -54256288 + MER45C DNA AcHobo 899 953 0 222 37 0 0 chr5 148829592 148829619 -54255913 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 926 281 211 14 chr5 148829620 148830561 -54254971 - L2 LINE L2 -17 3296 2154 238 230 11 11 chr5 148831420 148831507 -54254025 + (TGG)n Simple_repeat Simple_repeat 2 88 0 271 340 62 7 chr5 148832609 148832753 -54252779 + MIR SINE MIR 103 254 -8 344 313 78 0 chr5 148833522 148833637 -54251895 - L2 LINE L2 0 3272 3149 200 283 63 69 chr5 148833779 148833938 -54251594 + MIR3 SINE MIR 35 192 -16 571 255 140 10 chr5 148834921 148835121 -54250411 + MIR SINE MIR 25 250 -12 411 276 21 48 chr5 148835441 148835586 -54249946 - MER5A DNA MER1_type -47 142 2 225 343 67 52 chr5 148837119 148837253 -54248279 - MIR SINE MIR -19 243 108 275 270 9 52 chr5 148838984 148839070 -54246462 - MER117 DNA MER1_type -83 114 33 2035 235 47 45 chr5 148839070 148839624 -54245908 + MLT1H1 LTR MaLR 1 555 0 275 270 9 52 chr5 148839624 148839652 -54245880 - MER117 DNA MER1_type -164 33 5 318 310 43 9 chr5 148839995 148840111 -54245421 - MIR SINE MIR -71 137 18 244 286 44 11 chr5 148840305 148840396 -54245136 + MIR SINE MIR 157 250 -12 477 268 24 16 chr5 148840416 148840539 -54244993 - L2 LINE L2 -1 3312 3189 1154 244 150 42 chr5 148841335 148842099 -54243433 - L2 LINE L2 -1 3312 2477 1037 289 100 28 chr5 148842125 148842850 -54242682 - L1ME4a LINE L1 -106 6015 5256 403 273 35 7 chr5 148843125 148843268 -54242264 - MER103 DNA DNA -10 156 10 426 341 109 13 chr5 148843499 148843810 -54241722 - L1ME4a LINE L1 -3572 2574 2234 278 287 69 30 chr5 148843811 148843912 -54241620 - L2 LINE L2 0 3272 3168 388 342 129 20 chr5 148844095 148844392 -54241140 - L2 LINE L2 -219 3053 2727 859 196 36 31 chr5 148844407 148844601 -54240931 - MER63B DNA MER1_type -241 195 1 1175 296 12 83 chr5 148844603 148845207 -54240325 - L2 LINE L2 -590 2724 2164 2388 105 0 3 chr5 148845315 148845620 -54239912 - AluSx SINE Alu -8 304 1 599 272 22 47 chr5 148845905 148846167 -54239365 - L1MEc LINE L1 -694 1607 418 1026 272 67 31 chr5 148848839 148849225 -54236307 - LTR16C LTR ERVL -1 490 91 268 352 0 23 chr5 148849454 148849542 -54235990 - MIR SINE MIR -87 121 36 457 341 97 36 chr5 148851586 148851999 -54233533 + L2 LINE L2 2834 3271 -1 2075 100 31 17 chr5 148853988 148854277 -54231255 + AluSx SINE Alu 1 293 -19 221 331 123 15 chr5 148855022 148855152 -54230380 - MIR SINE MIR -118 144 1 2396 114 0 0 chr5 148855364 148855670 -54229862 - AluSx SINE Alu -6 306 1 229 269 13 51 chr5 148856574 148856652 -54228880 + MER5A DNA MER1_type 112 186 -3 302 280 9 19 chr5 148858777 148858884 -54226648 + GA-rich Low_complexity Low_complexity 2 107 0 2285 116 0 0 chr5 148859109 148859412 -54226120 + AluSq SINE Alu 1 303 -10 215 224 17 35 chr5 148859541 148859599 -54225933 - MIR SINE MIR -62 146 90 197 292 108 60 chr5 148859808 148859993 -54225539 - L2 LINE L2 -52 3220 3027 958 231 43 5 chr5 148860343 148860551 -54224981 - MIR SINE MIR 0 262 47 214 342 40 0 chr5 148860768 148860844 -54224688 - MIR SINE MIR -130 132 54 189 105 79 26 chr5 148860847 148860885 -54224647 + L2 LINE L2 3250 3289 -24 249 108 0 0 chr5 148860886 148860923 -54224609 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 258 32 0 0 chr5 148861097 148861128 -54224404 + (CAT)n Simple_repeat Simple_repeat 3 33 0 374 272 73 0 chr5 148862751 148862887 -54222645 + L2 LINE L2 3167 3312 -1 306 0 0 0 chr5 148864519 148864553 -54220979 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 192 152 0 0 chr5 148864942 148864975 -54220557 + A-rich Low_complexity Low_complexity 1 33 0 180 235 59 0 chr5 148866434 148866485 -54219047 + MIR SINE MIR 94 147 -115 21 36 0 0 chr5 148867317 148867345 -54218187 + AT_rich Low_complexity Low_complexity 1 28 0 2753 71 41 6 chr5 148867756 148868120 -54217412 + MER51B LTR ERV1 1 377 0 501 257 88 23 chr5 148868506 148868677 -54216855 + MIR3 SINE MIR 21 202 -6 252 0 0 0 chr5 148869372 148869400 -54216132 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 274 258 86 31 chr5 148870376 148870504 -54215028 + MLT1L LTR MaLR 143 277 -338 738 233 260 7 chr5 148871008 148871300 -54214232 + MER31B LTR ERV1 1 366 -100 2546 57 0 0 chr5 148874087 148874386 -54211146 + AluY SINE Alu 1 299 -12 258 348 73 39 chr5 148874444 148874622 -54210910 - L2 LINE L2 -3 3310 3127 579 223 0 0 chr5 148874696 148875122 -54210410 + (TG)n Simple_repeat Simple_repeat 1 426 0 215 288 135 59 chr5 148875270 148875492 -54210040 - L2 LINE L2 -556 2758 2520 273 114 0 0 chr5 148876830 148876874 -54208658 + MADE1 DNA Mariner 35 78 -2 216 286 29 105 chr5 148877207 148877417 -54208115 - L2 LINE L2 -812 2502 2309 961 309 85 82 chr5 148877881 148878288 -54207244 + HAL1 LINE L1 711 1123 -1384 2235 102 0 0 chr5 148878288 148878645 -54206887 + AluSq SINE Alu 1 357 0 961 309 85 82 chr5 148878645 148878951 -54206581 + HAL1 LINE L1 1123 1427 -1080 615 167 145 0 chr5 148878955 148879093 -54206439 + MER96B DNA MER1_type? 260 417 0 189 246 262 0 chr5 148879096 148879157 -54206375 - L2 LINE L2 -38 3275 3199 2106 154 31 6 chr5 148879175 148879531 -54206001 + MLT1A1 LTR MaLR 1 365 0 388 252 71 0 chr5 148879531 148879658 -54205874 + HAL1 LINE L1 1430 1565 -942 338 291 103 30 chr5 148879857 148880022 -54205510 + MLT1J2 LTR MaLR 272 448 -2 566 256 34 11 chr5 148880022 148880198 -54205334 + HAL1 LINE L1 1561 1740 -767 293 250 51 87 chr5 148880569 148880765 -54204767 - MIR3 SINE MIR -1 207 19 2189 136 41 22 chr5 148881491 148881858 -54203674 - THE1C LTR MaLR -1 374 1 579 256 97 31 chr5 148885216 148885443 -54200089 - MIR SINE MIR -3 259 18 403 335 99 16 chr5 148886938 148887120 -54198412 + L2 LINE L2 3104 3300 -13 1576 226 65 20 chr5 148887255 148887698 -54197834 + L1MB8 LINE L1 5716 6178 0 715 184 0 0 chr5 148888000 148888125 -54197407 + MIR SINE MIR 33 157 -105 2145 136 7 3 chr5 148889086 148889388 -54196144 + AluSx SINE Alu 1 303 -9 616 271 0 0 chr5 148889457 148889601 -54195931 - L2 LINE L2 0 3313 3170 2559 113 11 8 chr5 148890788 148891151 -54194381 + THE1B LTR MaLR 1 364 0 194 296 51 20 chr5 148892619 148892717 -54192815 + MIR SINE MIR 117 217 -45 243 298 28 22 chr5 148893973 148894151 -54191381 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 * 464 330 0 0 chr5 148894058 148894231 -54191301 + GA-rich Low_complexity Low_complexity 2 174 0 401 209 183 20 chr5 148894679 148894780 -54190752 - MIR SINE MIR -62 146 39 273 335 124 31 chr5 148895290 148895484 -54190048 + MIR SINE MIR 45 256 -6 258 236 112 22 chr5 148895689 148895778 -54189754 + MIR SINE MIR 45 141 -67 * 268 287 154 28 chr5 148895773 148895916 -54189616 - MIR3 SINE MIR -6 202 42 2134 125 3 0 chr5 148896099 148896387 -54189145 - AluSx SINE Alu -23 289 1 243 287 56 28 chr5 148898061 148898169 -54187363 + MIR SINE MIR 133 243 -19 415 301 144 36 chr5 148898170 148898732 -54186800 - L1MEc LINE L1 -2894 3235 2735 1332 145 9 18 chr5 148898732 148898960 -54186572 + L1PA15 LINE L1 5940 6165 0 415 301 144 36 chr5 148898960 148899229 -54186303 - L1MEc LINE L1 -3394 2735 2496 2504 72 0 10 chr5 148899229 148899536 -54185996 - AluY SINE Alu -7 304 1 415 301 144 36 chr5 148899536 148899635 -54185897 - L1MEc LINE L1 -3633 2496 2204 24 0 0 0 chr5 148899742 148899766 -54185766 + AT_rich Low_complexity Low_complexity 1 24 0 354 275 70 0 chr5 148900314 148900456 -54185076 - HAL1 LINE L1 -915 1592 1441 326 298 21 35 chr5 148900490 148900631 -54184901 - L1MEc LINE L1 -5007 1303 1165 885 256 82 55 chr5 148900705 148901268 -54184264 - L1MEc LINE L1 -5031 1088 511 329 288 101 107 chr5 148901278 148901663 -54183869 - L1MEc LINE L1 -5678 441 59 569 227 39 0 chr5 148901872 148902000 -54183532 - MIR SINE MIR -26 236 104 452 247 105 56 chr5 148905043 148905270 -54180262 + MIR SINE MIR 20 258 -4 2035 139 3 7 chr5 148906267 148906562 -54178970 + AluSg SINE Alu 1 294 -16 243 0 0 0 chr5 148906829 148906856 -54178676 + (CA)n Simple_repeat Simple_repeat 2 28 0 423 0 0 0 chr5 148907200 148907247 -54178285 + (CA)n Simple_repeat Simple_repeat 2 48 0 305 213 229 49 chr5 148909482 148909604 -54175928 + MLT1E2 LTR MaLR 1 144 -510 1855 190 53 56 chr5 148909605 148910073 -54175459 + MLT1C LTR MaLR 1 467 0 861 259 66 42 chr5 148910098 148910316 -54175216 + MLT1E2 LTR MaLR 137 363 -263 2611 128 39 7 chr5 148910316 148910731 -54174801 + MSTA LTR MaLR 1 428 0 861 259 66 42 chr5 148910731 148910771 -54174761 + MLT1E2 LTR MaLR 363 401 -225 749 189 34 20 chr5 148910776 148910924 -54174608 + MLT1E2 LTR MaLR 477 626 0 472 240 80 50 chr5 148911125 148911325 -54174207 + MER63A DNA MER1_type 5 210 0 616 343 84 29 chr5 148911464 148911678 -54173854 + L2 LINE L2 2144 2345 -969 2530 96 19 19 chr5 148911678 148912053 -54173479 - THE1C LTR MaLR 0 375 1 616 343 84 29 chr5 148912053 148912526 -54173006 + L2 LINE L2 2345 2869 -445 274 299 31 107 chr5 148912587 148912811 -54172721 + L2 LINE L2 2974 3180 -92 282 175 16 32 chr5 148914630 148914693 -54170839 + L2 LINE L2 3248 3309 -4 2071 108 22 0 chr5 148914800 148915106 -54170426 + AluSx SINE Alu 1 312 0 26 50 0 0 chr5 148915113 148915153 -54170379 + AT_rich Low_complexity Low_complexity 1 40 0 286 271 69 53 chr5 148915330 148915394 -54170138 - MER2 DNA MER2_type 0 345 284 2152 86 0 23 chr5 148915394 148915698 -54169834 - AluSc SINE Alu -12 297 1 286 271 69 53 chr5 148915698 148915819 -54169713 - MER2 DNA MER2_type -61 284 157 294 210 12 111 chr5 148915819 148915900 -54169632 - Tigger3(Golem) DNA MER2_type -1 3028 2956 432 262 128 0 chr5 148915984 148916125 -54169407 + MIR SINE MIR 99 257 -5 1056 210 6 0 chr5 148916312 148916493 -54169039 - Tigger3(Golem) DNA MER2_type -2846 183 2 757 181 8 0 chr5 148916493 148916619 -54168913 - MER2 DNA MER2_type -190 155 29 779 244 34 6 chr5 148917890 148918121 -54167411 - MIR SINE MIR 0 262 27 2082 120 7 13 chr5 148920694 148920995 -54164537 - AluSx SINE Alu -11 301 3 2331 67 0 3 chr5 148921774 148922103 -54163429 + AluY SINE Alu 1 328 0 436 293 86 59 chr5 148922376 148922888 -54162644 + HAL1b LINE L1 100 625 -723 872 201 0 18 chr5 148923123 148923292 -54162240 + FRAM SINE Alu 1 166 0 201 255 0 0 chr5 148923621 148923672 -54161860 + L2 LINE L2 3263 3313 0 331 288 176 15 chr5 148924077 148924806 -54160726 + L1ME LINE L1 4123 4968 -1178 933 150 7 0 chr5 148924822 148924962 -54160570 + FRAM SINE Alu 18 158 -18 2257 127 0 0 chr5 148925014 148925322 -54160210 + AluSx SINE Alu 1 308 -4 383 0 21 0 chr5 148925338 148925385 -54160147 + (CA)n Simple_repeat Simple_repeat 1 48 0 2130 194 6 56 chr5 148925446 148925482 -54160050 - MLT2C2 LTR ERVL 0 464 428 225 0 0 0 chr5 148925482 148925507 -54160025 + (TG)n Simple_repeat Simple_repeat 2 26 0 2130 194 6 56 chr5 148925507 148925954 -54159578 - MLT2C2 LTR ERVL -36 428 5 623 250 88 57 chr5 148926003 148926567 -54158965 + L1ME LINE L1 5122 5699 -422 21 0 0 0 chr5 148926653 148926674 -54158858 + AT_rich Low_complexity Low_complexity 1 21 0 222 192 0 39 chr5 148927932 148927984 -54157548 + T-rich Low_complexity Low_complexity 5 54 0 325 268 110 62 chr5 148928931 148929140 -54156392 + MLT1K LTR MaLR 29 247 -341 261 232 121 50 chr5 148929209 148929308 -54156224 + MLT1K LTR MaLR 459 564 -24 304 233 58 50 chr5 148929329 148929449 -54156083 + L2 LINE L2 3152 3272 0 204 374 49 40 chr5 148930077 148930401 -54155131 - L3b LINE CR1 -152 1431 1105 1555 194 62 28 chr5 148930873 148931228 -54154304 + MLT1B LTR MaLR 24 390 0 214 302 181 63 chr5 148931375 148931580 -54153952 + MIR SINE MIR 20 248 -14 469 282 77 47 chr5 148931730 148932179 -54153353 - L2 LINE L2 -103 3210 2745 241 287 73 59 chr5 148933609 148933745 -54151787 - MIR3 SINE MIR -61 147 10 209 300 0 0 chr5 148933803 148933853 -54151679 - L2 LINE L2 -17 3296 3247 237 33 0 0 chr5 148935345 148935375 -54150157 + (CA)n Simple_repeat Simple_repeat 2 31 0 899 233 112 51 chr5 148936724 148937098 -54148434 + MLT1J1 LTR MaLR 39 435 -11 386 271 33 0 chr5 148937375 148937497 -54148035 - MIR SINE MIR -21 241 116 1425 209 76 0 chr5 148939805 148940135 -54145397 + MLT1D LTR MaLR 6 360 -145 563 106 21 163 chr5 148941038 148941114 -54144418 + MLT1D LTR MaLR 381 430 -75 1695 197 0 7 chr5 148941114 148941418 -54144114 - AluSx SINE Alu -10 302 1 563 106 21 163 chr5 148941418 148941482 -54144050 + MLT1D LTR MaLR 430 501 -4 477 175 48 10 chr5 148941881 148941984 -54143548 - MSTD LTR MaLR 0 396 290 1557 250 13 29 chr5 148942804 148943110 -54142422 + MLT1A2 LTR MaLR 1 301 -73 3405 106 45 4 chr5 148943110 148943601 -54141931 + MER9 LTR ERVK 1 511 0 1557 250 13 29 chr5 148943601 148943674 -54141858 + MLT1A2 LTR MaLR 301 374 0 200 281 115 21 chr5 148943829 148943925 -54141607 + L2 LINE L2 3149 3253 -19 356 290 108 36 chr5 148944024 148944414 -54141118 - L1ME4a LINE L1 -11 6110 5693 22 35 0 0 chr5 148944414 148944443 -54141089 + AT_rich Low_complexity Low_complexity 1 29 0 352 225 9 36 chr5 148944536 148944647 -54140885 - L1ME3A LINE L1 -268 5885 5778 675 311 21 14 chr5 148944685 148944965 -54140567 - L1ME3A LINE L1 -357 5796 5515 812 267 143 23 chr5 148944998 148945515 -54140017 - L1ME3A LINE L1 -1471 4658 4080 488 144 128 16 chr5 148945541 148945666 -54139866 - L1MC4 LINE L1 -2 8040 7902 231 61 0 0 chr5 148945670 148945703 -54139829 + (CA)n Simple_repeat Simple_repeat 2 34 0 * 284 207 0 12 chr5 148945702 148945784 -54139748 + (TA)n Simple_repeat Simple_repeat 1 81 0 2314 205 105 22 chr5 148945790 148946574 -54138958 - L1MC4 LINE L1 -129 7913 7022 827 235 121 77 chr5 148946578 148947123 -54138409 - MLT1G1 LTR MaLR -2 553 3 319 232 113 123 chr5 148947126 148947419 -54138113 - MLT1G1-int LTR MaLR -1 1370 1081 1756 164 49 78 chr5 148947740 148948109 -54137423 + MLT2D LTR ERVL 1 358 -56 246 62 0 0 chr5 148948109 148948141 -54137391 + (CA)n Simple_repeat Simple_repeat 2 33 0 1756 164 49 78 chr5 148948141 148948197 -54137335 + MLT2D LTR ERVL 358 414 0 267 317 12 0 chr5 148948523 148948605 -54136927 - MLT1G1-int LTR MaLR -809 562 480 1057 234 193 60 chr5 148948980 148949498 -54136034 - MLT1G1 LTR MaLR -8 587 1 1388 241 99 13 chr5 148949498 148949796 -54135736 - L1MC4a LINE L1 -869 6939 6587 219 36 0 0 chr5 148949796 148949824 -54135708 + (CA)n Simple_repeat Simple_repeat 2 29 0 1388 241 99 13 chr5 148949824 148949978 -54135554 - L1MC4a LINE L1 -1221 6587 6448 1212 272 81 55 chr5 148950006 148950947 -54134585 - L1ME3A LINE L1 -2154 3975 3011 1754 158 4 4 chr5 148950953 148951225 -54134307 - AluJo SINE Alu -40 272 1 511 304 66 11 chr5 148951268 148951761 -54133771 - L1MEd LINE L1 -3604 2525 2048 31 0 0 0 chr5 148952032 148952063 -54133469 + AT_rich Low_complexity Low_complexity 1 31 0 274 219 16 16 chr5 148952972 148953036 -54132496 + MER21B LTR ERV1 133 196 -667 1328 220 97 50 chr5 148953073 148953495 -54132037 + MSTB2 LTR MaLR 14 455 -2 3817 237 109 61 chr5 148953497 148954098 -54131434 + MLT-int LTR MaLR 2 572 -1163 2413 104 3 0 chr5 148954098 148954405 -54131127 + AluSx SINE Alu 1 308 -4 3817 237 109 61 chr5 148954405 148955334 -54130198 + MLT-int LTR MaLR 572 1735 0 1100 195 137 70 chr5 148955337 148955752 -54129780 + MSTB2 LTR MaLR 15 457 0 1136 258 46 98 chr5 148955794 148956275 -54129257 + MER21B LTR ERV1 259 714 -149 348 255 82 31 chr5 148956376 148956690 -54128842 + L1MEc LINE L1 804 1098 -5107 1236 288 125 50 chr5 148956762 148958134 -54127398 - L1MEd LINE L1 -4785 1525 10 444 255 47 68 chr5 148958377 148958569 -54126963 - MIR SINE MIR 0 262 75 21 0 0 0 chr5 148959493 148959514 -54126018 + AT_rich Low_complexity Low_complexity 1 21 0 241 250 0 0 chr5 148960100 148960148 -54125384 - Charlie8 DNA MER1_type -1000 1417 1370 684 230 20 122 chr5 148960245 148960549 -54124983 - Charlie8 DNA MER1_type -2141 276 4 277 248 70 78 chr5 148961803 148961932 -54123600 + MIR SINE MIR 21 148 -60 405 238 12 49 chr5 148963214 148963430 -54122102 + MIR SINE MIR 18 218 -44 1716 102 0 4 chr5 148964317 148964542 -54120990 + AluSx SINE Alu 1 224 -88 196 256 98 12 chr5 148965045 148965127 -54120405 + MIR SINE MIR 47 135 -127 353 237 52 0 chr5 148965664 148965761 -54119771 + MLT1K LTR MaLR 487 588 0 1952 112 22 7 chr5 148968268 148968537 -54116995 - AluSg SINE Alu -37 273 1 2194 80 0 11 chr5 148968678 148969018 -54116514 + AluY SINE Alu 1 337 0 205 186 257 29 chr5 148969608 148969678 -54115854 - MIR SINE MIR -104 158 73 1183 201 39 83 chr5 148971788 148972196 -54113336 - MLT1B LTR MaLR 0 390 1 578 320 75 23 chr5 148976697 148977253 -54108279 - L1M4 LINE L1 -1527 4619 4035 267 256 194 31 chr5 148977363 148977492 -54108040 + L2 LINE L2 3159 3308 -5 412 286 50 75 chr5 148977504 148977806 -54107726 - L1M4 LINE L1 -2199 3947 3656 2499 57 7 0 chr5 148977806 148978107 -54107425 + AluY SINE Alu 3 305 -6 412 286 50 75 chr5 148978107 148978203 -54107329 - L1M4 LINE L1 -2490 3656 3559 891 108 0 0 chr5 148978204 148978324 -54107208 - AluSg/x SINE Alu -17 295 176 263 257 78 36 chr5 148978324 148978451 -54107081 - MIR SINE MIR -52 156 24 238 297 72 0 chr5 148978550 148978661 -54106871 + L1ME3A LINE L1 892 1010 -5921 1027 273 59 63 chr5 148979215 148979445 -54106087 + L1ME3A LINE L1 1275 1504 -5618 866 85 54 0 chr5 148979445 148979574 -54105958 + L1PB1 LINE L1 6014 6149 -2 1027 273 59 63 chr5 148979574 148980142 -54105390 + L1ME3A LINE L1 1504 2286 -4836 720 116 66 16 chr5 148980142 148980263 -54105269 - L1PA15 LINE L1 -1 6164 6038 1027 273 59 63 chr5 148980263 148980496 -54105036 + L1ME3A LINE L1 2286 2518 -4604 1222 255 86 34 chr5 148980812 148980839 -54104693 + L1ME3A LINE L1 2931 2955 -3986 2328 113 0 0 chr5 148980839 148981150 -54104382 + AluY SINE Alu 1 311 0 1222 255 86 34 chr5 148981150 148981714 -54103818 + L1ME3A LINE L1 2955 3553 -3388 1032 261 65 12 chr5 148981730 148982224 -54103308 + L1ME3A LINE L1 5738 6325 -636 265 167 205 39 chr5 148982224 148982302 -54103230 + LTR50 LTR ERVL 390 480 -315 249 255 59 10 chr5 148982349 148982451 -54103081 + LTR33A LTR ERVL 398 504 -19 1227 275 62 4 chr5 148982451 148982954 -54102578 + L1ME3A LINE L1 6417 6960 -5 368 282 31 37 chr5 148983212 148983375 -54102157 + MIR SINE MIR 81 242 -20 1327 131 37 14 chr5 148985564 148985801 -54099731 + AluJb SINE Alu 65 306 0 440 307 12 45 chr5 148988295 148988539 -54096993 - L2 LINE L2 -61 3252 3017 204 229 71 0 chr5 148989240 148989310 -54096222 + MIR SINE MIR 118 192 -70 707 179 14 7 chr5 148989573 148989713 -54095819 + MER5B DNA MER1_type 38 178 0 247 214 14 29 chr5 148990177 148990247 -54095285 + MIR SINE MIR 82 150 -58 43856 29 24 1 chr5 148991167 148997178 -54088354 + L1HS LINE L1 4 6155 0 432 342 43 0 chr5 148997675 148997862 -54087670 + MIR SINE MIR 3 197 -65 307 105 0 123 chr5 148997972 148998060 -54087472 - Alu SINE Alu 0 312 232 1076 184 79 44 chr5 148998602 148998948 -54086584 - MSTD LTR MaLR 0 396 1 2392 163 24 2 chr5 149000411 149000834 -54084698 + MSTB1 LTR MaLR 1 432 0 237 182 18 18 chr5 149001845 149001900 -54083632 + L2 LINE L2 3208 3262 -10 2254 95 7 7 chr5 149002077 149002371 -54083161 - AluSx SINE Alu -18 294 1 282 209 90 15 chr5 149003305 149003372 -54082160 - L2 LINE L2 -1 3271 3200 285 188 150 25 chr5 149006148 149006228 -54079304 + MER5A DNA MER1_type 20 109 -80 184 121 446 12 chr5 149006165 149006248 -54079284 - MER5A DNA MER1_type -23 166 48 * 2269 152 0 8 chr5 149007920 149008289 -54077243 + MER47A DNA MER2_type 1 366 0 1906 168 0 7 chr5 149009551 149009861 -54075671 - AluJb SINE Alu -2 310 3 23 0 0 0 chr5 149011353 149011376 -54074156 + AT_rich Low_complexity Low_complexity 1 23 0 462 246 209 16 chr5 149011950 149012137 -54073395 + MIR SINE MIR 31 253 -9 2191 112 0 7 chr5 149012304 149012599 -54072933 + AluSx SINE Alu 1 293 -19 200 250 50 17 chr5 149012888 149012948 -54072584 - L2 LINE L2 -11 3302 3241 2258 107 3 0 chr5 149014000 149014298 -54071234 - AluSp SINE Alu -14 299 1 650 263 34 34 chr5 149015246 149015482 -54070050 - MIR SINE MIR -10 252 17 189 107 0 0 chr5 149015783 149015811 -54069721 + (GGGA)n Simple_repeat Simple_repeat 4 31 0 181 314 39 10 chr5 149016306 149016408 -54069124 - MIR SINE MIR -71 137 33 218 197 0 98 chr5 149021465 149021526 -54064006 - L2 LINE L2 -25 3288 3234 319 339 9 0 chr5 149021559 149021668 -54063864 + MIR3 SINE MIR 46 155 -53 405 0 0 0 chr5 149024189 149024234 -54061298 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 1991 143 3 7 chr5 149024270 149024571 -54060961 - AluJb SINE Alu -2 310 11 2431 92 0 3 chr5 149024897 149025201 -54060331 + AluSc SINE Alu 1 303 -6 360 269 87 72 chr5 149025720 149025888 -54059644 - L2 LINE L2 -343 2971 2807 1596 143 70 40 chr5 149025888 149026217 -54059315 - MER44D DNA MER2_type 0 609 1 360 269 87 72 chr5 149026217 149026383 -54059149 - L2 LINE L2 -507 2807 2632 442 327 187 0 chr5 149026453 149026667 -54058865 - MIR SINE MIR -8 254 1 357 259 159 69 chr5 149027107 149027296 -54058236 + MLT1L LTR MaLR 287 524 -19 25 51 0 0 chr5 149027883 149027922 -54057610 + AT_rich Low_complexity Low_complexity 1 39 0 4149 109 12 34 chr5 149028675 149028997 -54056535 + L1PB1 LINE L1 5509 5836 -337 2520 77 0 0 chr5 149028997 149029307 -54056225 + AluY SINE Alu 1 310 -1 4149 109 12 34 chr5 149029307 149029663 -54055869 + L1PB1 LINE L1 5836 6173 0 4635 166 73 51 chr5 149029703 149031054 -54054478 - L1MD1 LINE L1 -14 6622 5243 4252 180 73 14 chr5 149031056 149032475 -54053057 + L1MB5 LINE L1 4654 6163 -11 2116 240 57 24 chr5 149032483 149033591 -54051941 - L1MD1 LINE L1 -1286 5254 3446 711 50 25 105 chr5 149033603 149033991 -54051541 + (TA)n Simple_repeat Simple_repeat 1 357 0 631 0 0 190 chr5 149034010 149034231 -54051301 + (TA)n Simple_repeat Simple_repeat 2 180 0 659 190 15 29 chr5 149034243 149034380 -54051152 - AluJb SINE Alu -176 136 2 3046 193 51 49 chr5 149034380 149035065 -54050467 - L1MD1 LINE L1 -3109 3431 2753 1946 137 62 45 chr5 149035065 149035423 -54050109 - THE1B LTR MaLR 0 364 1 3046 193 51 49 chr5 149035423 149035850 -54049682 - L1MD1 LINE L1 -3787 2753 2328 2766 90 36 34 chr5 149035850 149036208 -54049324 + L1PA7 LINE L1 2830 3191 -2955 2167 117 3 10 chr5 149036208 149036538 -54048994 - AluSp SINE Alu 0 313 1 2766 90 36 34 chr5 149036538 149036645 -54048887 + L1PA7 LINE L1 3191 3296 -2850 3935 78 14 0 chr5 149036673 149037186 -54048346 - L1P LINE L1 -1810 4336 3817 15449 81 2 0 chr5 149037186 149040037 -54045495 + L1PA7 LINE L1 3301 6153 -1 9609 182 98 35 chr5 149040037 149040554 -54044978 - L1MD1 LINE L1 -4201 2339 1856 1701 186 6 13 chr5 149040554 149040866 -54044666 - AluJb SINE Alu -2 310 1 9609 182 98 35 chr5 149040866 149042531 -54043001 - L1MD1 LINE L1 -4684 1856 19 2097 123 3 0 chr5 149043360 149043668 -54041864 + AluSx SINE Alu 1 309 0 362 255 57 0 chr5 149043871 149043977 -54041555 + L2 LINE L2 3161 3272 0 241 348 34 34 chr5 149044261 149044379 -54041153 + L2 LINE L2 3155 3272 0 779 246 41 5 chr5 149044386 149044581 -54040951 + MIR SINE MIR 60 261 -1 547 221 69 0 chr5 149044752 149044883 -54040649 - MIR SINE MIR -86 176 37 544 211 24 36 chr5 149045088 149045254 -54040278 + L2 LINE L2 1792 1955 -1359 428 245 14 42 chr5 149045258 149045401 -54040131 - L2 LINE L2 -2 3311 3173 * 2068 241 95 78 chr5 149045384 149045755 -54039777 + L2 LINE L2 1958 2321 -992 449 119 15 0 chr5 149045755 149045858 -54039674 + AluSg/x SINE Alu 216 319 0 2068 241 95 78 chr5 149045858 149046654 -54038878 + L2 LINE L2 2321 3217 -96 257 244 12 24 chr5 149046669 149046751 -54038781 - L1ME4a LINE L1 -208 5913 5833 1520 91 27 9 chr5 149046845 149047066 -54038466 - L1PA8 LINE L1 -5 6167 5943 526 77 13 0 chr5 149047067 149047145 -54038387 + L1PA8 LINE L1 5876 5954 -177 225 342 13 0 chr5 149047152 149047228 -54038304 + L2 LINE L2 3221 3297 -16 475 230 52 15 chr5 149048875 149049010 -54036522 + MER91C DNA MER1_type 1 140 0 247 60 40 20 chr5 149049109 149049159 -54036373 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 389 275 34 27 chr5 149049486 149049635 -54035897 + L1ME LINE L1 5669 5818 -303 577 164 12 35 chr5 149049670 149049841 -54035691 + CT-rich Low_complexity Low_complexity 2 168 0 745 288 39 84 chr5 149049855 149050365 -54035167 + LTR67 LTR ERVL 31 517 -40 1103 306 70 20 chr5 149050394 149050849 -54034683 + Tigger8 DNA MER2_type 5 482 -184 578 244 67 48 chr5 149052582 149052791 -54032741 + LTR33 LTR ERVL 3 215 -306 247 241 0 0 chr5 149053364 149053422 -54032110 - L2 LINE L2 -1 3312 3255 783 273 135 52 chr5 149053422 149053888 -54031644 + MLT1D LTR MaLR 1 505 0 1002 302 105 5 chr5 149053888 149054669 -54030863 - L2 LINE L2 -54 3259 2395 2246 111 73 14 chr5 149055711 149056055 -54029477 + THE1B LTR MaLR 1 364 0 10378 186 43 29 chr5 149056581 149057749 -54027783 - L1MC1 LINE L1 -5 6328 5179 2675 142 26 21 chr5 149057749 149058179 -54027353 - MSTB1 LTR MaLR 0 432 1 10378 186 43 29 chr5 149058179 149059514 -54026018 - L1MC1 LINE L1 -1154 5179 3713 234 119 0 0 chr5 149059514 149059556 -54025976 - Alu SINE Alu -2 299 258 10378 186 43 29 chr5 149059556 149060610 -54024922 - L1MC1 LINE L1 -2620 3713 2676 180 179 0 0 chr5 149061680 149061719 -54023813 + (CA)n Simple_repeat Simple_repeat 2 40 0 209 216 20 0 chr5 149061801 149061852 -54023680 + (TTCA)n Simple_repeat Simple_repeat 1 52 0 491 283 137 13 chr5 149062106 149062332 -54023200 - MIR SINE MIR -6 256 3 374 322 58 46 chr5 149063396 149063657 -54021875 - L2 LINE L2 -2 3311 3048 668 312 64 8 chr5 149063669 149063903 -54021629 - MIR SINE MIR -14 248 2 2280 205 25 12 chr5 149063954 149064433 -54021099 - LTR16C LTR ERVL -3 488 4 960 280 206 13 chr5 149064434 149065031 -54020501 - L2 LINE L2 -344 2970 2259 213 65 0 0 chr5 149065638 149065669 -54019863 + (T)n Simple_repeat Simple_repeat 1 31 0 616 315 61 39 chr5 149065793 149066285 -54019247 - L1M4 LINE L1 -2125 4021 3519 728 287 108 45 chr5 149066402 149067459 -54018073 - L1M4 LINE L1 -2883 3263 2140 31 58 0 0 chr5 149067462 149067514 -54018018 + AT_rich Low_complexity Low_complexity 1 52 0 235 333 0 19 chr5 149067776 149067881 -54017651 + GA-rich Low_complexity Low_complexity 4 106 0 504 331 50 35 chr5 149068034 149068294 -54017238 - L2 LINE L2 -6 3266 3003 342 336 49 36 chr5 149068822 149068860 -54016672 + MIR SINE MIR 22 58 -204 2422 91 3 0 chr5 149068860 149069168 -54016364 - AluSx SINE Alu -3 309 1 342 336 49 36 chr5 149069168 149069352 -54016180 + MIR SINE MIR 58 247 -15 1263 252 91 45 chr5 149070823 149071307 -54014225 + L1MD2 LINE L1 5853 6358 -1 397 361 135 0 chr5 149071861 149072069 -54013463 + L3 LINE CR1 1253 1488 -89 365 263 45 26 chr5 149073068 149073229 -54012303 - MLT1J2 LTR MaLR -8 433 278 2365 246 129 6 chr5 149074795 149075807 -54009725 + L2 LINE L2 2185 3313 0 238 275 83 17 chr5 149078592 149078712 -54006820 + MLT1H-int LTR MaLR 1587 1714 -21 1455 258 101 14 chr5 149078733 149079236 -54006296 + MLT1H LTR MaLR 3 549 0 349 269 37 37 chr5 149079236 149079344 -54006188 - MIR SINE MIR -60 202 92 5095 36 3 0 chr5 149079344 149079933 -54005599 - LTR10C LTR ERV1 0 591 1 349 269 37 37 chr5 149079933 149079958 -54005574 - MIR SINE MIR -169 93 69 963 278 41 16 chr5 149080017 149080334 -54005198 + MLT1I LTR MaLR 85 409 0 199 304 0 18 chr5 149080334 149080390 -54005142 - MIR SINE MIR -189 73 19 1803 147 6 90 chr5 149080672 149081026 -54004506 - MER4A LTR ERV1 0 664 341 516 100 100 11 chr5 149081042 149081132 -54004400 - MER4A LTR ERV1 -566 98 1 223 263 178 17 chr5 149081550 149081668 -54003864 - L2 LINE L2 -10 3303 3167 372 22 0 0 chr5 149082464 149082509 -54003023 + (TG)n Simple_repeat Simple_repeat 2 46 0 182 247 56 56 chr5 149082529 149082618 -54002914 + L2 LINE L2 3206 3294 -19 555 270 137 33 chr5 149082775 149083112 -54002420 - L2 LINE L2 -8 3305 2934 245 305 18 0 chr5 149085553 149085646 -53999886 + MIR SINE MIR 36 132 -76 377 238 9 121 chr5 149085675 149085806 -53999726 - L2 LINE L2 0 3313 3216 1255 114 33 9 chr5 149085806 149086016 -53999516 - L1MA8 LINE L1 -4 6287 6073 377 238 9 121 chr5 149086016 149086107 -53999425 - L2 LINE L2 -97 3216 3116 * 1935 253 23 54 chr5 149086106 149086770 -53998762 - L2 LINE L2 -609 2705 2063 400 212 17 0 chr5 149086790 149086890 -53998642 + ERVL LTR ERVL 4423 4552 -960 1563 183 138 21 chr5 149086929 149087312 -53998220 - MER68 LTR ERV1 -134 428 1 247 194 161 0 chr5 149088098 149088160 -53997372 - L2 LINE L2 0 3272 3201 343 241 17 60 chr5 149088739 149088855 -53996677 - MIR SINE MIR -69 139 28 201 138 0 0 chr5 149089002 149089031 -53996501 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 505 251 31 106 chr5 149094073 149094328 -53991204 + MIR SINE MIR 17 252 -10 182 326 63 42 chr5 149094531 149094626 -53990906 - MIR SINE MIR -108 154 58 260 278 74 28 chr5 149095230 149095338 -53990194 - L2 LINE L2 -27 3286 3174 1040 277 70 43 chr5 149095606 149096005 -53989527 - MLT1J LTR MaLR -15 496 80 2204 110 0 13 chr5 149096005 149096304 -53989228 + AluSx SINE Alu 1 295 -17 1040 277 70 43 chr5 149096304 149096387 -53989145 - MLT1J LTR MaLR -431 80 1 2117 117 3 0 chr5 149097658 149097976 -53987556 + AluSq SINE Alu 1 319 0 373 315 119 46 chr5 149099781 149100310 -53985222 - L2 LINE L2 -20 3293 2683 391 283 130 90 chr5 149100603 149100957 -53984575 + L2 LINE L2 2904 3271 -1 794 156 7 0 chr5 149101516 149101651 -53983881 - MSTD LTR MaLR 0 396 261 * 1508 224 23 20 chr5 149101592 149101945 -53983587 - MLT2B3 LTR ERVL -197 357 4 510 256 15 15 chr5 149102291 149102424 -53983108 - L2 LINE L2 -3 3269 3137 1624 165 113 40 chr5 149102538 149102884 -53982648 - MLT1A2 LTR MaLR 0 374 4 187 295 13 26 chr5 149104442 149104520 -53981012 + L2 LINE L2 3194 3270 -2 373 239 163 65 chr5 149106238 149106422 -53979110 + MIR SINE MIR 1 202 -60 180 264 42 28 chr5 149106489 149106561 -53978971 + MIR SINE MIR 178 250 -12 403 299 157 0 chr5 149107287 149107421 -53978111 - MIR SINE MIR -19 243 89 2517 69 0 0 chr5 149107478 149107783 -53977749 + AluY SINE Alu 1 305 -6 442 103 86 78 chr5 149107996 149108357 -53977175 + (CACAC)n Simple_repeat Simple_repeat 1 363 0 261 244 61 12 chr5 149108599 149108681 -53976851 + MIR SINE MIR 105 190 -72 2209 129 0 0 chr5 149108999 149109309 -53976223 + AluSx SINE Alu 1 310 -2 384 40 0 0 chr5 149109339 149109389 -53976143 + (CA)n Simple_repeat Simple_repeat 2 51 0 211 303 13 13 chr5 149109777 149109853 -53975679 + MIR SINE MIR 173 248 -14 2177 119 0 3 chr5 149112935 149113237 -53972295 - AluSg1 SINE Alu -8 301 1 402 74 0 0 chr5 149113717 149113771 -53971761 + (CA)n Simple_repeat Simple_repeat 2 55 0 397 343 91 10 chr5 149113984 149114182 -53971350 + MIR SINE MIR 49 262 0 187 329 29 14 chr5 149115885 149115955 -53969577 + L2 LINE L2 3242 3312 -1 432 210 14 21 chr5 149115957 149116100 -53969432 + GA-rich Low_complexity Low_complexity 3 144 0 447 193 73 28 chr5 149116766 149116875 -53968657 + L2 LINE L2 3183 3296 -17 405 221 58 0 chr5 149118239 149118343 -53967189 - MER94 DNA DNA -7 127 18 386 223 192 31 chr5 149119754 149119884 -53965648 - MIR SINE MIR -34 228 78 456 277 38 7 chr5 149120288 149120472 -53965060 + MIR SINE MIR 2 227 -35 24 77 0 0 chr5 149121049 149121101 -53964431 + AT_rich Low_complexity Low_complexity 1 52 0 233 229 21 0 chr5 149122362 149122410 -53963122 + L2 LINE L2 3254 3302 -11 223 258 34 67 chr5 149122628 149122717 -53962815 + L2 LINE L2 3223 3308 -5 235 393 19 28 chr5 149123970 149124181 -53961351 - L2 LINE L2 -185 3087 2879 27 62 0 0 chr5 149124242 149124290 -53961242 + AT_rich Low_complexity Low_complexity 1 48 0 232 286 34 50 chr5 149124313 149124432 -53961100 + MLT1J2 LTR MaLR 3 119 -331 318 241 11 11 chr5 149124437 149124524 -53961008 + MLT1I LTR MaLR 323 409 0 384 200 100 0 chr5 149124569 149124659 -53960873 - L2 LINE L2 0 3313 3215 372 158 50 2 chr5 149125060 149125161 -53960371 + L1ME LINE L1 5735 5844 -311 329 250 25 31 chr5 149125286 149125303 -53960229 - L1MA10 LINE L1 -1 6333 6317 2958 212 32 15 chr5 149125303 149125959 -53959573 - L1ME2 LINE L1 -9 6155 5484 2150 114 44 3 chr5 149125959 149126257 -53959275 - AluSg SINE Alu 0 310 1 2958 212 32 15 chr5 149126257 149126321 -53959211 - L1ME2 LINE L1 -680 5484 5423 2357 98 0 10 chr5 149127266 149127573 -53957959 + AluSp SINE Alu 1 304 -9 526 219 0 23 chr5 149128920 149129048 -53956484 - L1ME2 LINE L1 -728 5438 5314 7125 237 44 18 chr5 149129072 149129950 -53955582 - L1M1 LINE L1 -4171 2997 2144 1938 134 93 16 chr5 149129950 149130263 -53955269 + MER1B DNA MER1_type 1 337 0 7125 237 44 18 chr5 149130263 149132429 -53953103 - L1M1 LINE L1 -5024 2144 5 2552 216 40 22 chr5 149132432 149133112 -53952420 - L1ME2 LINE L1 -816 5330 4639 204 179 0 0 chr5 149136717 149136756 -53948776 + A-rich Low_complexity Low_complexity 2 40 0 306 0 0 0 chr5 149137105 149137139 -53948393 + (CA)n Simple_repeat Simple_repeat 2 35 0 714 256 143 5 chr5 149137172 149137375 -53948157 + MIR SINE MIR 28 258 -4 235 236 191 18 chr5 149138261 149138371 -53947161 + MIR SINE MIR 20 148 -60 206 206 88 73 chr5 149140896 149140964 -53944568 + L2 LINE L2 3204 3272 0 692 272 62 86 chr5 149141297 149141543 -53943989 + L1MC5 LINE L1 7270 7520 -441 2253 225 48 9 chr5 149141543 149142086 -53943446 - MLT1F1 LTR MaLR -3 564 1 692 272 62 86 chr5 149142086 149142505 -53943027 + L1MC5 LINE L1 7520 7919 -42 372 303 68 25 chr5 149142505 149142667 -53942865 - HAL1 LINE L1 -1090 1417 1249 2102 131 0 3 chr5 149143061 149143358 -53942174 + AluSc SINE Alu 1 296 -13 231 324 110 36 chr5 149143950 149144169 -53941363 - L2 LINE L2 -474 2840 2606 4632 82 4 50 chr5 149144814 149145476 -53940056 - L1MA1 LINE L1 -4 6298 5668 2446 92 0 0 chr5 149145476 149145781 -53939751 - AluSg SINE Alu -5 305 1 4632 82 4 50 chr5 149145781 149145816 -53939716 - L1MA1 LINE L1 -634 5668 5633 201 74 0 0 chr5 149147154 149147181 -53938351 + (T)n Simple_repeat Simple_repeat 1 27 0 564 261 40 112 chr5 149147531 149147774 -53937758 - MIR SINE MIR -3 259 37 1547 205 42 3 chr5 149147774 149148062 -53937470 - AluJb SINE Alu -13 299 1 564 261 40 112 chr5 149148062 149148094 -53937438 - MIR SINE MIR -225 37 4 504 93 0 0 chr5 149148812 149148887 -53936645 + (TGGA)n Simple_repeat Simple_repeat 1 75 0 836 279 118 19 chr5 149149066 149149482 -53936050 - LTR16A1 LTR ERVL 0 457 1 322 338 59 15 chr5 149151032 149151168 -53934364 - MIR3 SINE MIR -19 189 48 471 335 12 68 chr5 149151278 149151529 -53934003 + MIR SINE MIR 18 254 -8 332 267 26 35 chr5 149151725 149151841 -53933691 + MLT1K LTR MaLR 186 300 -288 350 226 60 71 chr5 149151903 149152071 -53933461 + MLT1K LTR MaLR 418 583 -5 181 238 0 24 chr5 149152720 149152762 -53932770 + L2 LINE L2 3232 3272 0 2314 82 3 0 chr5 149155793 149156096 -53929436 + AluSc SINE Alu 1 304 -5 2046 113 0 3 chr5 149156166 149156450 -53929082 + AluSx SINE Alu 1 283 -29 518 248 130 25 chr5 149157237 149157398 -53928134 - MER91A DNA MER1_type 0 196 19 1520 108 33 0 chr5 149160275 149160488 -53925044 + AluSg SINE Alu 61 280 -30 288 70 0 0 chr5 149160488 149160531 -53925001 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 213 291 27 55 chr5 149161450 149161560 -53923972 + MIR SINE MIR 31 137 -71 405 0 0 0 chr5 149161562 149161607 -53923925 + (TG)n Simple_repeat Simple_repeat 2 46 0 273 281 264 8 chr5 149161717 149161838 -53923694 + MIR SINE MIR 1 152 -110 245 244 215 0 chr5 149162932 149163067 -53922465 + L2 LINE L2 1860 2023 -1291 349 291 12 0 chr5 149163067 149163153 -53922379 - LTR16A1 LTR ERVL -299 158 72 746 280 183 24 chr5 149163788 149164366 -53921166 - L2 LINE L2 0 3313 2652 1297 177 67 7 chr5 149165049 149165331 -53920201 - MER33 DNA MER1_type -25 299 1 462 321 0 18 chr5 149165960 149166125 -53919407 - MIR SINE MIR 0 262 101 385 283 100 87 chr5 149166204 149166505 -53919027 + L1MC/D LINE L1 4362 4666 -1480 1066 226 115 12 chr5 149166538 149167022 -53918510 - MLT1F1 LTR MaLR 0 567 1 798 294 100 26 chr5 149167026 149167497 -53918035 + L1MC/D LINE L1 5311 5819 -361 753 232 60 0 chr5 149167541 149167709 -53917823 + MER119 DNA MER1_type 1 178 -405 230 307 20 10 chr5 149170384 149170485 -53915047 - MLT1L LTR MaLR 0 615 514 319 321 38 33 chr5 149170503 149170687 -53914845 - MLT1K LTR MaLR -173 415 231 231 279 54 63 chr5 149172229 149172340 -53913192 - L2 LINE L2 -2 3311 3202 546 210 73 8 chr5 149174016 149174140 -53911392 + MER58C DNA MER1_type 1 132 -83 243 265 0 0 chr5 149174140 149174189 -53911343 + polypurine Low_complexity Low_complexity 1 49 0 495 223 0 0 chr5 149174196 149174290 -53911242 + MER58C DNA MER1_type 122 215 0 857 252 45 75 chr5 149174924 149175346 -53910186 - LTR16C LTR ERVL 0 491 1 300 202 11 79 chr5 149177251 149177340 -53908192 + MIR3 SINE MIR 111 193 -15 5946 147 26 16 chr5 149177589 149177946 -53907586 - L1PB4 LINE L1 -7 6149 5797 261 75 0 0 chr5 149177946 149177986 -53907546 + (TG)n Simple_repeat Simple_repeat 2 41 0 5946 147 26 16 chr5 149177986 149179642 -53905890 - L1PB4 LINE L1 -359 5797 4125 2338 167 13 10 chr5 149180355 149180750 -53904782 - MSTD LTR MaLR 0 396 1 265 325 0 0 chr5 149180816 149180896 -53904636 + MIR SINE MIR 183 262 0 1630 265 51 9 chr5 149181233 149181663 -53903869 + LTR33 LTR ERVL 54 501 -20 1142 186 49 0 chr5 149182181 149182385 -53903147 + MER20 DNA MER1_type 2 215 -4 1241 337 84 30 chr5 149182527 149183262 -53902270 + ERVL LTR ERVL 2614 3388 -2376 639 178 46 2 chr5 149183262 149183383 -53902149 + MER20 DNA MER1_type 88 219 0 969 326 62 6 chr5 149183424 149183777 -53901755 + ERVL LTR ERVL 3435 3807 -1957 1628 251 74 12 chr5 149183975 149184460 -53901072 + LTR33 LTR ERVL 3 517 -4 184 275 0 0 chr5 149184464 149184504 -53901028 - MIR SINE MIR -57 151 112 181 250 13 92 chr5 149184889 149184965 -53900567 - L2 LINE L2 0 3272 3203 347 182 192 61 chr5 149185057 149185255 -53900277 + L1ME4a LINE L1 5783 6006 -115 376 271 110 72 chr5 149185414 149185831 -53899701 - L1MC4a LINE L1 -87 6034 5602 685 274 115 56 chr5 149187042 149187183 -53898349 + L2 LINE L2 2560 2691 -623 2197 113 0 0 chr5 149187183 149187492 -53898040 + AluY SINE Alu 1 309 -2 685 274 115 56 chr5 149187492 149187707 -53897825 + L2 LINE L2 2691 2937 -377 503 276 82 62 chr5 149187713 149188177 -53897355 - LTR16C LTR ERVL -12 479 7 277 287 156 50 chr5 149188177 149188459 -53897073 + L2 LINE L2 2953 3264 -49 712 216 62 36 chr5 149188569 149188763 -53896769 - MIR SINE MIR -47 215 17 189 240 136 56 chr5 149188760 149188885 -53896647 - MIR SINE MIR -86 176 42 * 497 92 13 0 chr5 149189244 149189320 -53896212 + (TG)n Simple_repeat Simple_repeat 2 78 0 331 271 16 45 chr5 149189984 149190135 -53895397 + L1P5 LINE L1 5318 5477 -644 439 211 33 11 chr5 149191237 149191327 -53894205 - MER94 DNA DNA -29 105 14 425 287 200 15 chr5 149191847 149192042 -53893490 + MIR SINE MIR 31 261 -1 190 298 35 0 chr5 149192185 149192242 -53893290 - MIR SINE MIR -111 151 93 420 290 55 14 chr5 149192363 149192508 -53893024 - MIR SINE MIR -94 168 18 202 298 19 58 chr5 149193367 149193471 -53892061 + MIR SINE MIR 43 142 -66 216 255 0 0 chr5 149194630 149194677 -53890855 + (CAA)n Simple_repeat Simple_repeat 1 47 0 773 311 49 4 chr5 149194699 149194924 -53890608 - MIR SINE MIR -27 235 1 412 207 35 0 chr5 149195066 149195153 -53890379 + MER53 DNA DNA 96 185 -4 247 237 17 0 chr5 149195811 149195870 -53889662 + L2 LINE L2 3211 3270 -2 215 290 32 0 chr5 149195989 149196051 -53889481 + L2 LINE L2 3200 3263 -9 203 267 44 41 chr5 149196072 149196203 -53889329 + MIR SINE MIR 15 143 -65 1587 209 32 22 chr5 149197482 149197851 -53887681 - MLT1A2 LTR MaLR 0 374 2 803 277 22 9 chr5 149198113 149198337 -53887195 + MIR SINE MIR 30 256 -6 1822 217 150 30 chr5 149198352 149199157 -53886375 + L2 LINE L2 2159 3109 -204 252 0 0 0 chr5 149199157 149199185 -53886347 + (CA)n Simple_repeat Simple_repeat 1 28 0 1822 217 150 30 chr5 149199185 149199416 -53886116 + L2 LINE L2 3109 3311 -2 759 259 39 5 chr5 149201270 149201475 -53884057 - MIR SINE MIR -36 226 15 499 247 13 13 chr5 149203367 149203517 -53882015 + MER103 DNA DNA 4 153 -13 3273 191 47 21 chr5 149204028 149204775 -53880757 - LTR1B LTR ERV1 0 785 1 1800 180 14 14 chr5 149204903 149205258 -53880274 - MER4D LTR ERV1 0 903 549 1593 154 18 7 chr5 149205291 149205570 -53879962 - MER49 LTR ERV1 -641 282 1 21 36 0 0 chr5 149206091 149206119 -53879413 + AT_rich Low_complexity Low_complexity 1 28 0 218 338 0 0 chr5 149206172 149206243 -53879289 - MIR3 SINE MIR -37 171 101 434 138 0 23 chr5 149206795 149206882 -53878650 + (GGGA)n Simple_repeat Simple_repeat 1 85 0 590 297 183 22 chr5 149207168 149207660 -53877872 + L2 LINE L2 2077 2647 -667 331 306 153 28 chr5 149208190 149208334 -53877198 + L2 LINE L2 3111 3272 0 545 255 90 87 chr5 149209015 149209325 -53876207 + MLT1K LTR MaLR 278 588 0 954 156 112 15 chr5 149209438 149209643 -53875889 + L1MB5 LINE L1 5939 6163 -11 1966 250 58 23 chr5 149209651 149210792 -53874740 - L1MDa LINE L1 -1286 5254 3410 331 237 10 72 chr5 149210798 149210895 -53874637 - L1MC4 LINE L1 -1338 6704 6614 667 204 15 29 chr5 149210896 149211033 -53874499 - AluJo SINE Alu -176 136 2 2894 200 50 48 chr5 149211033 149211718 -53873814 - L1MDa LINE L1 -3109 3431 2753 1967 154 48 31 chr5 149211718 149212076 -53873456 - THE1B LTR MaLR 0 364 1 2894 200 50 48 chr5 149212076 149212503 -53873029 - L1MDa LINE L1 -3787 2753 2328 2418 87 37 70 chr5 149212503 149212879 -53872653 + L1P LINE L1 2830 3190 -2956 2339 118 3 3 chr5 149212879 149213192 -53872340 - AluSp SINE Alu 0 313 1 2418 87 37 70 chr5 149213192 149213275 -53872257 + L1P LINE L1 3190 3274 -2872 2240 50 4 0 chr5 149213950 149214210 -53871322 + AluY SINE Alu 45 305 -6 256 239 62 53 chr5 149214575 149214688 -53870844 + MER103 DNA DNA 8 121 -45 2331 102 3 3 chr5 149218392 149218695 -53866837 + AluSx SINE Alu 1 303 -9 342 337 37 6 chr5 149219059 149219222 -53866310 - L2 LINE L2 -1 3271 3104 3125 166 19 60 chr5 149219634 149220272 -53865260 - LTR9 LTR ERV1 0 612 1 2100 290 70 30 chr5 149220869 149222050 -53863482 + L2 LINE L2 2077 3288 -25 1845 218 150 30 chr5 149223816 149224047 -53861485 - L2 LINE L2 -2 3311 3109 252 0 0 0 chr5 149224047 149224075 -53861457 + (TG)n Simple_repeat Simple_repeat 1 28 0 1845 218 150 30 chr5 149224075 149224880 -53860652 - L2 LINE L2 -204 3109 2159 807 277 22 9 chr5 149224895 149225119 -53860413 - MIR SINE MIR -6 256 30 1622 209 32 22 chr5 149225381 149225750 -53859782 + MLT1A2 LTR MaLR 2 374 0 207 267 44 41 chr5 149227027 149227158 -53858374 - MIR SINE MIR -65 143 15 221 290 32 0 chr5 149227179 149227241 -53858291 - L2 LINE L2 -9 3263 3200 253 237 17 0 chr5 149227360 149227419 -53858113 - L2 LINE L2 -2 3270 3211 399 207 35 0 chr5 149228077 149228164 -53857368 - MER53 DNA DNA -4 185 96 777 311 49 4 chr5 149228306 149228531 -53857001 + MIR SINE MIR 1 235 -27 216 255 0 0 chr5 149228553 149228600 -53856932 + (TTG)n Simple_repeat Simple_repeat 1 47 0 207 298 19 58 chr5 149229759 149229863 -53855669 - MIR SINE MIR -66 142 43 425 290 55 14 chr5 149230722 149230867 -53854665 + MIR SINE MIR 18 168 -94 190 298 35 0 chr5 149230988 149231045 -53854487 + MIR SINE MIR 93 151 -111 426 287 200 15 chr5 149231188 149231383 -53854149 - MIR SINE MIR -1 261 31 416 222 33 11 chr5 149231903 149231993 -53853539 + MER94 DNA DNA 14 105 -29 316 275 15 41 chr5 149233095 149233259 -53852273 - L1ME LINE L1 -644 5477 5305 479 95 14 0 chr5 149233910 149233984 -53851548 + (CA)n Simple_repeat Simple_repeat 2 76 0 198 373 9 18 chr5 149234973 149235083 -53850449 + MIR SINE MIR 123 231 -31 1079 209 23 5 chr5 149237236 149237451 -53848081 - MER20 DNA MER1_type 0 219 1 626 312 56 70 chr5 149238558 149238705 -53846827 + L2 LINE L2 2533 2680 -634 397 73 0 0 chr5 149238705 149238760 -53846772 - L1MA5 LINE L1 -2 6298 6244 626 312 56 70 chr5 149238760 149239057 -53846475 + L2 LINE L2 2680 2971 -343 325 316 61 26 chr5 149239180 149239294 -53846238 + L2 LINE L2 3172 3289 -24 227 195 0 0 chr5 149239315 149239356 -53846176 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 661 272 12 30 chr5 149240086 149240255 -53845277 - MIR3 SINE MIR -29 179 14 2220 189 49 31 chr5 149240316 149240872 -53844660 + L1MB5 LINE L1 5575 6140 -34 2228 120 0 0 chr5 149240874 149241165 -53844367 - AluSx SINE Alu -21 291 1 406 279 129 39 chr5 149241761 149241994 -53843538 + L3 LINE CR1 1154 1407 -170 528 16 0 0 chr5 149242247 149242308 -53843224 + (CA)n Simple_repeat Simple_repeat 2 62 0 210 244 0 0 chr5 149242455 149242500 -53843032 + MER5A DNA MER1_type 38 82 -107 470 307 18 12 chr5 149242819 149242985 -53842547 + MIR SINE MIR 90 256 -6 346 248 148 40 chr5 149243422 149243571 -53841961 - L2 LINE L2 -30 3283 3119 2876 164 79 28 chr5 149243571 149244180 -53841352 + L1MC1 LINE L1 5675 6314 -19 829 316 35 22 chr5 149244242 149244679 -53840853 - L2 LINE L2 -253 3060 2622 2396 100 3 3 chr5 149244847 149245156 -53840376 + AluSx SINE Alu 2 310 -2 276 232 37 0 chr5 149245697 149245779 -53839753 + MER89 LTR ERV1 5 89 -470 * 1523 211 80 0 chr5 149245752 149246088 -53839444 + MER89 LTR ERV1 197 559 0 348 273 57 135 chr5 149246107 149246404 -53839128 + L2 LINE L2 2949 3222 -50 494 289 104 70 chr5 149246431 149246961 -53838571 + MLT1K LTR MaLR 19 566 -22 2356 113 0 0 chr5 149247196 149247497 -53838035 - AluSx SINE Alu -11 301 1 240 319 60 37 chr5 149247566 149247782 -53837750 + L2 LINE L2 1812 2032 -1282 380 324 141 30 chr5 149247890 149248475 -53837057 + L2 LINE L2 2381 3028 -244 885 239 19 19 chr5 149248586 149248791 -53836741 - MER58A DNA MER1_type -19 205 1 226 243 214 0 chr5 149248888 149248958 -53836574 + L2 LINE L2 3186 3270 -2 276 304 80 75 chr5 149249482 149249683 -53835849 - L2 LINE L2 -797 2517 2316 256 242 15 0 chr5 149252656 149252722 -53832810 - L1ME LINE L1 -369 5797 5731 1445 164 85 35 chr5 149253842 149254240 -53831292 + L1MB7 LINE L1 5585 6120 -64 215 61 30 0 chr5 149254242 149254275 -53831257 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 2205 102 0 3 chr5 149254275 149254560 -53830972 - AluSx SINE Alu -26 286 3 312 225 28 0 chr5 149254906 149254977 -53830555 + L1MB7 LINE L1 6111 6183 -1 1882 158 7 13 chr5 149254986 149255284 -53830248 + AluJb SINE Alu 1 296 -16 536 265 57 70 chr5 149256290 149256520 -53829012 + MIR SINE MIR 29 255 -7 310 51 0 0 chr5 149256528 149256567 -53828965 + Alu SINE Alu 20 58 -245 322 273 172 10 chr5 149257401 149257500 -53828032 + MER5B DNA MER1_type 62 176 -2 373 291 40 47 chr5 149257983 149258131 -53827401 - MER5A DNA MER1_type -4 185 39 * 401 294 13 52 chr5 149257999 149258152 -53827380 + MER5A DNA MER1_type 37 183 -6 462 257 155 34 chr5 149259512 149259718 -53825814 - MIR SINE MIR -12 250 20 542 209 113 23 chr5 149259741 149259918 -53825614 - LTR33A LTR ERVL 0 523 331 451 317 70 5 chr5 149260231 149260417 -53825115 - MIR SINE MIR -36 226 29 468 304 44 13 chr5 149262246 149262404 -53823128 - MIR SINE MIR -72 190 28 440 277 15 15 chr5 149263762 149263892 -53821640 - MER94 DNA DNA -4 130 1 262 176 0 245 chr5 149265281 149265440 -53820092 - L2 LINE L2 -68 3245 3126 266 240 70 54 chr5 149265986 149266115 -53819417 + MIR3 SINE MIR 43 173 -35 1698 178 65 40 chr5 149266355 149266745 -53818787 - MER21B LTR ERV1 -6 599 478 741 161 63 7 chr5 149266756 149266899 -53818633 - MER21B LTR ERV1 -710 153 3 262 303 72 46 chr5 149267389 149267541 -53817991 - MIR3 SINE MIR -19 189 34 1144 208 157 53 chr5 149268678 149269129 -53816403 - MLT1D LTR MaLR -2 503 6 247 267 0 17 chr5 149269158 149269218 -53816314 + MIR SINE MIR 20 78 -184 265 149 0 40 chr5 149270728 149270802 -53814730 + L1ME4a LINE L1 6048 6118 -3 1993 111 37 24 chr5 149271461 149271758 -53813774 + AluSx SINE Alu 6 306 -6 198 260 171 41 chr5 149272933 149273079 -53812453 - MIR3 SINE MIR -41 167 3 243 250 228 22 chr5 149273198 149273290 -53812242 + MIR SINE MIR 30 140 -68 308 336 105 7 chr5 149274955 149275098 -53810434 + MLT1I LTR MaLR 17 173 -236 1042 212 91 19 chr5 149275110 149275417 -53810115 - MER58B DNA MER1_type -12 329 1 497 235 52 20 chr5 149275464 149275617 -53809915 + MLT1I LTR MaLR 237 394 -15 304 325 44 0 chr5 149276074 149276188 -53809344 + MIR3 SINE MIR 81 199 -9 359 299 93 36 chr5 149276552 149276830 -53808702 + L1ME4a LINE L1 5533 5826 -295 21 0 0 0 chr5 149277209 149277230 -53808302 + AT_rich Low_complexity Low_complexity 1 21 0 672 296 127 16 chr5 149278151 149279834 -53805698 - L1MEc LINE L1 -3600 2615 790 383 203 119 8 chr5 149280473 149280591 -53804941 - MER103 DNA DNA -33 133 3 244 220 0 0 chr5 149282390 149282440 -53803092 - L2 LINE L2 -3 3310 3261 414 300 40 75 chr5 149282569 149282822 -53802710 - MIR SINE MIR -16 246 3 841 149 54 0 chr5 149284101 149284249 -53801283 - MLT1E3 LTR MaLR -9 615 460 598 193 26 50 chr5 149284350 149284677 -53800855 - MLT1E3 LTR MaLR -221 372 1 226 267 186 0 chr5 149285120 149285206 -53800326 - MER5A DNA MER1_type -53 136 35 1693 146 0 25 chr5 149285521 149285795 -53799737 + AluJb SINE Alu 33 299 -13 2275 88 11 0 chr5 149286649 149286933 -53798599 - AluSq SINE Alu -26 287 1 500 205 8 0 chr5 149287049 149287152 -53798380 - MER5A DNA MER1_type -80 109 6 1311 187 84 7 chr5 149287166 149287465 -53798067 - MER33 DNA MER1_type -1 323 2 297 284 83 28 chr5 149289293 149289402 -53796130 + L2 LINE L2 2993 3107 -165 2126 134 0 7 chr5 149290968 149291274 -53794258 + AluSx SINE Alu 6 309 -3 221 0 35 0 chr5 149291764 149291793 -53793739 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 294 245 71 61 chr5 149292234 149292431 -53793101 - L1ME3 LINE L1 0 6170 5972 312 277 101 27 chr5 149292497 149292645 -53792887 - L1ME3 LINE L1 -206 5964 5806 2764 104 39 7 chr5 149293692 149294106 -53791426 + MER41A LTR ERV1 1 427 -127 1748 165 6 25 chr5 149294106 149294422 -53791110 - AluSg SINE Alu 0 310 1 388 193 18 37 chr5 149294502 149294611 -53790921 - L1ME4a LINE L1 -73 6048 5942 343 269 97 104 chr5 149294614 149294922 -53790610 - L1ME4a LINE L1 -246 5875 5570 184 304 165 25 chr5 149296137 149296216 -53789316 - L2 LINE L2 -2 3311 3222 731 253 62 0 chr5 149297269 149297447 -53788085 + MER5A DNA MER1_type 1 189 0 533 321 18 5 chr5 149297559 149297777 -53787755 + L1MC4a LINE L1 5686 5906 -1902 2048 109 25 0 chr5 149298007 149298333 -53787199 + AluY SINE Alu 1 333 0 2343 58 0 14 chr5 149299544 149299862 -53785670 - AluSc SINE Alu 0 314 1 2293 110 7 0 chr5 149299956 149300256 -53785276 - AluSx SINE Alu -10 302 1 340 290 31 117 chr5 149300256 149300546 -53784986 + L2 LINE L2 2976 3240 -32 2143 121 7 0 chr5 149300976 149301273 -53784259 + AluSx SINE Alu 3 301 -11 252 167 0 0 chr5 149301377 149301419 -53784113 - L2 LINE L2 -4 3268 3227 519 200 75 8 chr5 149301566 149301686 -53783846 - MIR SINE MIR -27 235 108 2414 99 0 0 chr5 149302623 149302935 -53782597 - AluSq SINE Alu -1 312 1 1885 152 0 7 chr5 149302956 149303259 -53782273 - AluJb SINE Alu -11 301 1 183 388 57 19 chr5 149303368 149303577 -53781955 - L2 LINE L2 -723 2591 2375 202 302 16 0 chr5 149304368 149304431 -53781101 + MIR SINE MIR 76 139 -69 223 244 133 11 chr5 149304651 149304741 -53780791 - MIR SINE MIR -11 251 151 22 0 0 0 chr5 149304848 149304870 -53780662 + AT_rich Low_complexity Low_complexity 1 22 0 1791 166 10 22 chr5 149304881 149305052 -53780480 - AluSx SINE Alu -2 310 143 2366 67 7 3 chr5 149305052 149305349 -53780183 - AluSq SINE Alu -15 298 1 1791 166 10 22 chr5 149305349 149305491 -53780041 - AluSx SINE Alu -169 143 1 2902 204 32 40 chr5 149306124 149306897 -53778635 - L1ME1 LINE L1 -59 6107 5341 410 221 29 29 chr5 149306953 149307093 -53778439 + MER104 DNA Tc2 38 177 -3 182 337 79 50 chr5 149307121 149307189 -53778343 - MIR SINE MIR -157 105 32 2325 96 3 3 chr5 149307189 149307502 -53778030 - AluSq SINE Alu 0 313 1 182 337 79 50 chr5 149307502 149307534 -53777998 - MIR SINE MIR -230 32 2 230 262 215 9 chr5 149307694 149307801 -53777731 - L2 LINE L2 -5 3267 3139 357 197 55 158 chr5 149307955 149308138 -53777394 + MIR SINE MIR 51 214 -48 439 244 20 114 chr5 149308579 149308780 -53776752 + MIR SINE MIR 45 226 -36 454 274 100 12 chr5 149308813 149308973 -53776559 - MIR3 SINE MIR 0 208 37 2505 68 0 0 chr5 149309076 149309386 -53776146 - AluY SINE Alu -1 310 1 1416 193 50 53 chr5 149309625 149309926 -53775606 + AluJo SINE Alu 1 300 -12 2022 135 0 10 chr5 149309926 149310230 -53775302 + AluSx SINE Alu 1 301 -11 306 122 0 54 chr5 149310661 149310735 -53774797 + (TTCTCC)n Simple_repeat Simple_repeat 3 72 0 2193 84 7 3 chr5 149311588 149311884 -53773648 + AluSx SINE Alu 1 297 -15 2174 79 0 17 chr5 149311884 149312209 -53773323 + AluSq SINE Alu 1 321 0 440 281 46 36 chr5 149312599 149312795 -53772737 - L1ME3A LINE L1 0 6170 5973 315 285 102 24 chr5 149312841 149313010 -53772522 - L1ME3A LINE L1 -170 5992 5806 2299 98 0 7 chr5 149313723 149314029 -53771503 + AluSx SINE Alu 1 304 -8 317 297 11 0 chr5 149314438 149314529 -53771003 + MIR3 SINE MIR 88 179 -29 186 182 114 0 chr5 149315188 149315232 -53770300 + L2 LINE L2 3256 3304 -9 193 300 108 25 chr5 149315432 149315552 -53769980 - L2 LINE L2 -211 3061 2932 379 298 193 6 chr5 149315722 149315893 -53769639 - MIR SINE MIR -28 234 32 341 310 126 23 chr5 149316043 149316217 -53769315 - MIR SINE MIR -66 196 5 1271 105 0 0 chr5 149316539 149316710 -53768822 + AluSg/x SINE Alu 131 301 -11 2429 62 7 0 chr5 149318432 149318737 -53766795 + AluY SINE Alu 1 307 -4 229 234 63 54 chr5 149319100 149319211 -53766321 + MER103 DNA DNA 8 119 -47 1703 180 0 3 chr5 149319212 149319542 -53765990 + AluJo SINE Alu 1 329 0 961 198 21 5 chr5 149319728 149319920 -53765612 - MER3 DNA MER1_type 0 209 15 1793 145 59 0 chr5 149320617 149320906 -53764626 - AluJb SINE Alu -1 311 6 2119 125 3 3 chr5 149321880 149322192 -53763340 - AluSq SINE Alu 0 313 2 234 0 0 0 chr5 149322192 149322218 -53763314 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1842 108 0 96 chr5 149322218 149322532 -53763000 - AluSx SINE Alu -28 284 1 1749 182 3 10 chr5 149323582 149323890 -53761642 - AluJo SINE Alu -6 306 1 247 245 64 11 chr5 149325001 149325095 -53760437 + LTR67 LTR ERVL 458 556 -1 245 325 48 44 chr5 149325184 149325299 -53760233 + MIR SINE MIR 40 153 -64 1780 79 124 15 chr5 149325315 149325582 -53759950 + AluSg SINE Alu 1 296 -14 28 0 0 47 chr5 149326376 149326394 -53759138 + AT_rich Low_complexity Low_complexity 1 18 -23 2434 69 3 0 chr5 149326394 149326699 -53758833 + AluSp SINE Alu 1 306 -7 28 0 0 47 chr5 149326699 149326723 -53758809 + AT_rich Low_complexity Low_complexity 18 41 0 2031 134 0 3 chr5 149327124 149327430 -53758102 - AluJb SINE Alu -7 305 1 548 226 40 0 chr5 149329391 149329515 -53756017 + MIR SINE MIR 79 207 -55 272 278 11 44 chr5 149329542 149329632 -53755900 - L2 LINE L2 -2 3270 3184 681 303 76 5 chr5 149330090 149330301 -53755231 + MIR SINE MIR 13 238 -24 359 256 5 168 chr5 149330344 149330422 -53755110 - MIR SINE MIR -42 220 131 2311 91 0 0 chr5 149330422 149330720 -53754812 - AluSg SINE Alu -12 298 1 359 256 5 168 chr5 149330720 149330890 -53754642 - MIR SINE MIR -131 131 16 709 319 67 19 chr5 149331264 149331624 -53753908 - L3 LINE CR1 -68 1509 1133 657 325 37 21 chr5 149331745 149331988 -53753544 - MIR SINE MIR -1 261 15 209 279 29 0 chr5 149333155 149333223 -53752309 - L2 LINE L2 0 3272 3203 236 318 110 58 chr5 149333468 149333498 -53752034 - MIR3 SINE MIR -11 197 170 2249 104 0 0 chr5 149333498 149333796 -53751736 + AluSq SINE Alu 1 298 -15 236 318 110 58 chr5 149333796 149333919 -53751613 - MIR3 SINE MIR -38 170 36 598 336 4 23 chr5 149334992 149335247 -53750285 - MIR SINE MIR -10 252 6 1025 245 31 16 chr5 149335784 149336041 -53749491 + MIR SINE MIR 1 261 -1 35 63 0 0 chr5 149338635 149338698 -53746834 + GC_rich Low_complexity Low_complexity 1 63 0 40 59 0 0 chr5 149338831 149338899 -53746633 + GC_rich Low_complexity Low_complexity 1 68 0 27 0 0 0 chr5 149338923 149338950 -53746582 + GC_rich Low_complexity Low_complexity 1 27 0 48 88 0 0 chr5 149339086 149339211 -53746321 + GC_rich Low_complexity Low_complexity 1 125 0 1231 163 18 22 chr5 149342770 149342997 -53742535 - AluJo SINE Alu 0 312 87 1509 164 0 16 chr5 149343256 149343512 -53742020 + L1MB7 LINE L1 5917 6168 -16 484 278 88 53 chr5 149344174 149344746 -53740786 + L2 LINE L2 2522 3114 -158 186 317 67 0 chr5 149344824 149344884 -53740648 + MIR SINE MIR 123 186 -76 2242 93 10 16 chr5 149345302 149345612 -53739920 + AluSx SINE Alu 1 308 -4 494 291 40 7 chr5 149346963 149347111 -53738421 + MIR SINE MIR 66 218 -44 180 327 79 0 chr5 149348013 149348114 -53737418 - MIR3 SINE MIR -39 169 61 253 215 138 0 chr5 149348972 149349037 -53736495 + MIR SINE MIR 80 153 -109 195 253 67 13 chr5 149349631 149349706 -53735826 - MIR3 SINE MIR -26 182 104 426 308 9 0 chr5 149350422 149350529 -53735003 + L2 LINE L2 3163 3270 -2 574 287 76 40 chr5 149350546 149350621 -53734911 - MIR SINE MIR -12 250 179 2415 79 0 0 chr5 149350621 149350914 -53734618 + AluSg SINE Alu 5 295 -15 574 287 76 40 chr5 149350914 149351061 -53734471 - MIR SINE MIR -83 179 20 371 233 278 15 chr5 149351949 149352082 -53733450 - MIR SINE MIR -59 203 36 395 250 30 0 chr5 149353060 149353160 -53732372 + MIR SINE MIR 39 141 -121 509 260 20 53 chr5 149354447 149354597 -53730935 + MER91A DNA MER1_type 52 196 0 333 296 117 28 chr5 149355007 149355186 -53730346 - L2 LINE L2 -205 3067 2873 209 330 10 21 chr5 149355245 149355342 -53730190 + MIR SINE MIR 80 175 -87 587 228 146 12 chr5 149356131 149356302 -53729230 + MIR SINE MIR 49 242 -20 204 67 33 0 chr5 149356347 149356377 -53729155 + L2 LINE L2 3265 3295 -18 204 308 58 42 chr5 149356992 149357112 -53728420 + L3 LINE CR1 1369 1490 -87 232 281 58 79 chr5 149358657 149358796 -53726736 - MIR SINE MIR -92 170 35 3021 219 201 16 chr5 149358895 149358961 -53726571 - L2 LINE L2 -446 2868 2816 1909 143 0 23 chr5 149358961 149359261 -53726271 - AluJo SINE Alu -19 293 1 3021 219 201 16 chr5 149359261 149360246 -53725286 - L2 LINE L2 -498 2816 1622 183 246 31 77 chr5 149360763 149360828 -53724704 - MIR SINE MIR -155 107 46 2513 79 0 9 chr5 149361141 149361456 -53724076 + AluSx SINE Alu 1 312 0 226 295 74 21 chr5 149362690 149362785 -53722747 + MIR SINE MIR 45 144 -118 547 312 50 68 chr5 149364178 149364559 -53720973 - L2 LINE L2 -23 3249 2876 291 301 98 26 chr5 149365437 149365590 -53719942 - L2 LINE L2 -84 3188 3025 243 342 80 27 chr5 149365640 149365865 -53719667 - L2 LINE L2 -438 2876 2640 2432 82 7 0 chr5 149371693 149371997 -53713535 + AluSx SINE Alu 1 306 -6 812 29 0 20 chr5 149372738 149372840 -53712692 - L1PA3 LINE L1 0 6155 6056 471 110 0 66 chr5 149372974 149373065 -53712467 - L1PB4 LINE L1 0 6156 6072 1113 150 4 101 chr5 149373066 149373313 -53712219 - L1PB4 LINE L1 -5 6151 5929 207 0 0 0 chr5 149375304 149375327 -53710205 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 38 0 0 0 chr5 149376178 149376216 -53709316 + AT_rich Low_complexity Low_complexity 1 38 0 2354 78 0 14 chr5 149376545 149376839 -53708693 - AluSc SINE Alu -19 290 1 1750 163 7 39 chr5 149377193 149377500 -53708032 + AluJo SINE Alu 5 301 -11 407 59 0 0 chr5 149377509 149377560 -53707972 + MER66A LTR ERV1 287 337 -141 2381 101 0 7 chr5 149378165 149378472 -53707060 + AluSg SINE Alu 1 305 -5 1732 181 7 10 chr5 149379803 149380095 -53705437 - AluJo SINE Alu -21 291 1 234 0 0 0 chr5 149380240 149380266 -53705266 + (GA)n Simple_repeat Simple_repeat 1 26 0 414 226 39 0 chr5 149380268 149380370 -53705162 - MER58 DNA MER1_type -109 106 1 2843 224 106 34 chr5 149382952 149383389 -53702143 - L1M4 LINE L1 -2923 3223 2819 2013 146 0 14 chr5 149383389 149383547 -53701985 - AluSx SINE Alu -21 291 137 2497 74 0 0 chr5 149383547 149383846 -53701686 - AluY SINE Alu -12 299 1 2013 146 0 14 chr5 149383846 149383982 -53701550 - AluSx SINE Alu -175 137 1 2843 224 106 34 chr5 149383982 149384073 -53701459 - L1M4 LINE L1 -3327 2819 2736 2184 118 0 3 chr5 149384073 149384362 -53701170 + AluSq SINE Alu 1 288 -25 2843 224 106 34 chr5 149384362 149384867 -53700665 - L1M4 LINE L1 -3410 2736 2114 239 272 43 11 chr5 149385651 149385743 -53699789 + L1ME LINE L1 5540 5634 -487 312 308 17 47 chr5 149385825 149385997 -53699535 + L1MC4 LINE L1 7875 8041 -1 1662 163 71 14 chr5 149386109 149386391 -53699141 - AluJb SINE Alu -14 298 1 2039 98 73 7 chr5 149386400 149386686 -53698846 - AluSq SINE Alu -8 305 1 769 174 25 0 chr5 149386795 149386916 -53698616 + FLAM_C SINE Alu 3 126 -17 2116 148 7 0 chr5 149386932 149387236 -53698296 + AluJb SINE Alu 1 306 -6 27 0 0 0 chr5 149387253 149387280 -53698252 + AT_rich Low_complexity Low_complexity 1 27 0 1788 179 0 10 chr5 149387513 149387832 -53697700 + AluJb SINE Alu 1 312 0 657 325 136 16 chr5 149387861 149388044 -53697488 + L2 LINE L2 2804 2964 -349 2250 100 10 3 chr5 149388044 149388344 -53697188 + AluSq SINE Alu 1 302 -11 657 325 136 16 chr5 149388344 149388594 -53696938 + L2 LINE L2 2964 3289 -24 461 58 43 0 chr5 149388789 149388858 -53696674 + L1MB4 LINE L1 6103 6174 -6 838 96 30 0 chr5 149388877 149389012 -53696520 + L1MB4 LINE L1 5841 5979 -201 871 124 54 38 chr5 149389063 149389248 -53696284 + L1MB4 LINE L1 5987 6174 -6 1956 99 19 4 chr5 149389334 149389596 -53695936 + AluSx SINE Alu 35 300 -12 2246 101 24 3 chr5 149389597 149389895 -53695637 + AluSg SINE Alu 2 305 -5 1982 123 35 3 chr5 149389903 149390188 -53695344 + AluSx SINE Alu 1 294 -18 342 248 101 54 chr5 149390226 149390293 -53695239 + L1MC4a LINE L1 5864 5926 -1882 2456 97 0 3 chr5 149390293 149390602 -53694930 + AluSc SINE Alu 2 309 0 342 248 101 54 chr5 149390602 149390663 -53694869 + L1MC4a LINE L1 5926 5998 -1810 2024 138 8 48 chr5 149391317 149391521 -53694011 - MER2 DNA MER2_type -1 343 157 2460 58 0 7 chr5 149391521 149391816 -53693716 - AluY SINE Alu -18 293 1 2024 138 8 48 chr5 149391816 149391967 -53693565 - MER2 DNA MER2_type -187 157 2 287 281 42 0 chr5 149392154 149392250 -53693282 + L1P LINE L1 4902 5001 -1145 1617 259 202 11 chr5 149392574 149393237 -53692295 - L2 LINE L2 -672 2642 1853 2312 82 0 20 chr5 149393575 149393712 -53691820 + AluSq SINE Alu 1 139 -170 2352 97 0 3 chr5 149393712 149394012 -53691520 + AluSg SINE Alu 1 299 -11 2312 82 0 20 chr5 149394012 149394189 -53691343 + AluSq SINE Alu 139 309 0 575 122 12 0 chr5 149394217 149394299 -53691233 - AluJo SINE Alu -174 138 56 2173 128 3 0 chr5 149395755 149396061 -53689471 + AluSp SINE Alu 1 307 -6 235 327 158 0 chr5 149396190 149396291 -53689241 + L2 LINE L2 3122 3238 -34 22 0 0 0 chr5 149396561 149396583 -53688949 + AT_rich Low_complexity Low_complexity 1 22 0 1491 182 7 53 chr5 149396585 149396723 -53688809 + AluJo SINE Alu 2 145 -167 2286 112 0 6 chr5 149396723 149397035 -53688497 + AluSg SINE Alu 1 310 0 2190 96 3 7 chr5 149397043 149397334 -53688198 + AluSp SINE Alu 1 290 -23 1491 182 7 53 chr5 149397334 149397488 -53688044 + AluJo SINE Alu 152 289 -23 22 70 0 0 chr5 149399473 149399516 -53686016 + AT_rich Low_complexity Low_complexity 1 43 0 249 311 8 25 chr5 149401335 149401439 -53684093 + (CGTG)n Simple_repeat Simple_repeat 2 105 -16 185 0 0 39 chr5 149401439 149401465 -53684067 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 249 311 8 25 chr5 149401465 149401482 -53684050 + (CGTG)n Simple_repeat Simple_repeat 105 121 0 193 265 132 15 chr5 149401595 149401663 -53683869 - MIR SINE MIR -186 76 1 2028 135 3 0 chr5 149402501 149402798 -53682734 + AluJb SINE Alu 1 298 -14 229 289 133 11 chr5 149403012 149403102 -53682430 + MER5A DNA MER1_type 61 161 -28 2148 94 0 66 chr5 149403840 149404159 -53681373 + AluSx SINE Alu 1 298 -14 333 180 175 8 chr5 149404347 149404462 -53681070 + MIR3 SINE MIR 7 154 -54 2114 139 0 0 chr5 149405298 149405599 -53679933 + AluJb SINE Alu 1 301 -11 407 277 13 16 chr5 149405621 149405771 -53679761 + MIR SINE MIR 36 186 -62 2522 201 74 46 chr5 149405782 149406349 -53679183 + L1ME3 LINE L1 5457 6048 -114 1810 138 49 26 chr5 149406349 149406524 -53679008 - AluJo SINE Alu 0 312 126 2282 106 0 10 chr5 149406524 149406825 -53678707 - AluSq SINE Alu -15 298 1 1810 138 49 26 chr5 149406825 149406954 -53678578 - AluJo SINE Alu -186 126 1 2522 201 74 46 chr5 149406954 149407064 -53678468 + L1ME3 LINE L1 6048 6153 -9 2237 95 3 17 chr5 149407085 149407379 -53678153 + AluSx SINE Alu 4 293 -19 555 266 63 5 chr5 149407925 149408132 -53677400 - MIR SINE MIR -7 255 37 1194 288 229 34 chr5 149409140 149409502 -53676030 - L2 LINE L2 -68 3245 2955 2393 72 10 0 chr5 149409502 149409794 -53675738 - AluSx SINE Alu -1 311 17 1194 288 229 34 chr5 149409794 149410401 -53675131 - L2 LINE L2 -358 2955 2467 1648 166 74 0 chr5 149410401 149410684 -53674848 + AluJo SINE Alu 1 304 -8 1194 288 229 34 chr5 149410684 149411083 -53674449 - L2 LINE L2 -846 2467 1598 2235 98 3 3 chr5 149411087 149411383 -53674149 + AluSq SINE Alu 1 296 -17 235 321 201 5 chr5 149411449 149411658 -53673874 - L2 LINE L2 -1924 1390 1141 261 125 21 0 chr5 149411865 149411913 -53673619 + L2 LINE L2 2994 3042 -271 21 57 0 0 chr5 149411933 149411968 -53673564 + AT_rich Low_complexity Low_complexity 1 35 0 264 245 236 0 chr5 149412155 149412261 -53673271 + L2 LINE L2 3134 3264 -8 229 274 104 47 chr5 149412813 149412847 -53672685 - MER81 DNA DNA -2 112 81 2326 115 3 3 chr5 149412847 149413160 -53672372 + AluSq SINE Alu 1 313 0 229 274 104 47 chr5 149413160 149413231 -53672301 - MER81 DNA DNA -33 81 1 2353 74 3 29 chr5 149414263 149414572 -53670960 - AluSg1 SINE Alu -7 302 2 1503 165 62 4 chr5 149416307 149416579 -53668953 - AluSx SINE Alu -23 289 2 247 208 0 38 chr5 149416781 149416834 -53668698 + MER2 DNA MER2_type 2 52 -293 2059 131 10 0 chr5 149416897 149417195 -53668337 + AluSx SINE Alu 1 301 -11 404 159 31 35 chr5 149417272 149417341 -53668191 + MER2 DNA MER2_type 128 196 -149 2225 100 0 20 chr5 149417341 149417642 -53667890 - AluSx SINE Alu -17 295 1 404 159 31 35 chr5 149417642 149417742 -53667790 + MER2 DNA MER2_type 196 345 0 443 294 24 8 chr5 149418002 149418128 -53667404 + Tigger8 DNA MER2_type 98 225 -441 230 273 99 29 chr5 149418176 149418348 -53667184 + Tigger8 DNA MER2_type 325 508 -158 2215 99 7 0 chr5 149418628 149418921 -53666611 - AluSq SINE Alu -18 295 1 384 219 52 10 chr5 149418921 149419017 -53666515 + MER5B DNA MER1_type 6 105 -73 1829 170 10 0 chr5 149419273 149419561 -53665971 - AluSx SINE Alu -21 291 1 180 0 0 0 chr5 149422097 149422117 -53663415 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 2479 67 0 10 chr5 149422122 149422435 -53663097 + AluY SINE Alu 1 310 -1 2281 81 14 0 chr5 149422595 149422879 -53662653 - AluSx SINE Alu -24 288 1 673 231 0 0 chr5 149422919 149423049 -53662483 + FLAM_C SINE Alu 1 130 -3 351 206 137 64 chr5 149423946 149424165 -53661367 - L1ME4a LINE L1 -83 6038 5804 272 240 152 41 chr5 149424773 149424944 -53660588 + MIR SINE MIR 27 216 -46 884 158 0 20 chr5 149425149 149425295 -53660237 + AluJo SINE Alu 1 143 -169 3363 207 58 24 chr5 149426314 149427146 -53658386 - L1ME1 LINE L1 -53 6113 5254 663 178 113 5 chr5 149427151 149427336 -53658196 - L1ME1 LINE L1 -952 5194 4990 1843 157 100 3 chr5 149427383 149427734 -53657798 - MLT1B LTR MaLR -1 389 5 1068 172 54 0 chr5 149427764 149427950 -53657582 - AluJo SINE Alu -31 281 86 242 163 0 0 chr5 149428064 149428107 -53657425 - MIR3 SINE MIR -45 163 121 1674 158 20 30 chr5 149428488 149428786 -53656746 - AluJb SINE Alu -17 295 1 1516 169 20 30 chr5 149428961 149429262 -53656270 - AluJo SINE Alu -14 298 1 2216 108 7 7 chr5 149429401 149429707 -53655825 - AluSx SINE Alu -6 306 1 1172 174 186 16 chr5 149430521 149430779 -53654753 - AluJo SINE Alu 0 302 1 212 241 35 0 chr5 149430857 149430915 -53654617 - L2 LINE L2 -38 3234 3175 314 239 7 92 chr5 149431128 149431146 -53654386 + MER5B DNA MER1_type 48 66 -112 2144 127 0 3 chr5 149431146 149431445 -53654087 + AluSx SINE Alu 1 298 -14 314 239 7 92 chr5 149431445 149431568 -53653964 + MER5B DNA MER1_type 66 177 -1 306 137 0 0 chr5 149431568 149431619 -53653913 + AluJ/FLAM SINE Alu 34 84 -218 1393 178 29 4 chr5 149431619 149431861 -53653671 - AluJb SINE Alu -53 259 12 347 282 0 0 chr5 149432628 149432706 -53652826 + Tigger5 DNA MER2_type 2243 2320 -3 240 217 0 0 chr5 149432706 149432751 -53652781 - Tigger5 DNA MER2_type -2245 78 34 1971 125 10 24 chr5 149433510 149433806 -53651726 + AluSx SINE Alu 1 292 -20 1191 176 34 34 chr5 149433820 149434053 -53651479 + AluJo SINE Alu 7 239 -73 497 154 87 10 chr5 149434053 149434157 -53651375 + AluJb SINE Alu 200 311 -1 1693 154 99 0 chr5 149434579 149434852 -53650680 + AluSx SINE Alu 1 300 -12 997 145 21 0 chr5 149435117 149435262 -53650270 - AluJb SINE Alu -18 294 147 2102 108 14 7 chr5 149435494 149435789 -53649743 - AluSq SINE Alu -14 299 3 2128 101 11 7 chr5 149435851 149436137 -53649395 + AluSx SINE Alu 1 287 -25 8072 130 33 18 chr5 149436174 149437493 -53648039 + Tigger1 DNA MER2_type 1 1338 -1080 239 146 21 0 chr5 149437475 149437523 -53648009 + Alu SINE Alu 86 134 -168 * 1637 187 35 0 chr5 149437526 149437815 -53647717 + AluJo SINE Alu 1 299 -13 1879 165 3 13 chr5 149437872 149438181 -53647351 + AluSx SINE Alu 3 308 -4 1608 166 6 62 chr5 149439108 149439306 -53646226 - AluJo SINE Alu -5 307 132 2241 110 0 22 chr5 149439306 149439625 -53645907 + AluSx SINE Alu 1 312 0 1608 166 6 62 chr5 149439625 149439751 -53645781 - AluJo SINE Alu -180 132 1 2121 122 7 10 chr5 149440271 149440574 -53644958 + AluSx SINE Alu 5 306 -6 685 206 0 8 chr5 149440690 149440816 -53644716 - FLAM_C SINE Alu -13 130 6 2244 99 10 7 chr5 149441017 149441320 -53644212 + AluSp SINE Alu 1 304 -9 1406 135 73 99 chr5 149441779 149442134 -53643398 - MER7A DNA MER2_type -1 345 2 272 188 17 145 chr5 149442606 149442679 -53642853 + MIR3 SINE MIR 93 147 -61 2276 97 7 3 chr5 149442679 149442987 -53642545 - AluY SINE Alu -2 309 1 272 188 17 145 chr5 149442987 149443030 -53642502 + MIR3 SINE MIR 147 194 -14 2294 113 0 0 chr5 149443747 149444048 -53641484 + AluSx SINE Alu 1 301 -11 2296 110 7 0 chr5 149444202 149444501 -53641031 + AluSx SINE Alu 10 310 -2 1968 106 0 14 chr5 149445155 149445437 -53640095 - AluY SINE Alu -33 278 1 2218 113 10 0 chr5 149445710 149446010 -53639522 + AluSq SINE Alu 1 303 -10 193 275 101 46 chr5 149447960 149448069 -53637463 - MIR SINE MIR -64 144 30 2288 94 3 0 chr5 149452076 149452383 -53633149 - AluSx SINE Alu -4 308 1 773 253 21 50 chr5 149453281 149453466 -53632066 + MIR SINE MIR 29 207 -55 2022 126 0 7 chr5 149453466 149453767 -53631765 + AluSx SINE Alu 1 299 -13 773 253 21 50 chr5 149453767 149453822 -53631710 + MIR SINE MIR 207 262 0 2199 96 20 0 chr5 149453951 149454254 -53631278 + AluSx SINE Alu 1 309 -3 305 298 123 38 chr5 149454987 149455073 -53630459 + L1ME4a LINE L1 5805 5882 -239 2228 100 0 3 chr5 149455073 149455383 -53630149 + AluSg SINE Alu 1 309 -1 305 298 123 38 chr5 149455383 149455588 -53629944 + L1ME4a LINE L1 5882 6121 0 2193 114 0 0 chr5 149455589 149455888 -53629644 + AluSx SINE Alu 1 299 -13 2083 108 0 0 chr5 149455911 149456198 -53629334 + AluSg SINE Alu 13 299 -11 * 2147 92 0 0 chr5 149456196 149456480 -53629052 + AluSg SINE Alu 27 310 0 334 285 80 7 chr5 149457450 149457587 -53627945 + L3b LINE CR1 1191 1337 -246 300 261 15 0 chr5 149457605 149457670 -53627862 - MIR SINE MIR 0 262 197 2067 106 0 0 chr5 149457670 149457954 -53627578 - AluSq SINE Alu -12 301 18 2063 120 3 10 chr5 149458353 149458662 -53626870 + AluSg SINE Alu 1 307 -3 208 327 127 0 chr5 149458807 149458917 -53626615 + MIR3 SINE MIR 37 160 -48 1891 101 0 69 chr5 149459028 149459364 -53626168 - AluSq SINE Alu 0 315 1 1990 124 0 0 chr5 149459373 149459675 -53625857 - AluSq SINE Alu 0 302 1 1143 111 82 39 chr5 149459678 149459886 -53625646 - L1MD2 LINE L1 -24 6335 6119 181 241 172 23 chr5 149460496 149460583 -53624949 - L3 LINE CR1 -1075 502 403 1868 161 0 0 chr5 149460871 149461181 -53624351 + AluJb SINE Alu 1 310 -2 412 257 56 42 chr5 149461419 149461563 -53623969 + MIR SINE MIR 31 176 -86 1952 148 82 0 chr5 149462260 149462577 -53622955 - MER61A LTR ERV1 0 343 1 624 239 28 0 chr5 149462618 149462760 -53622772 - MIR SINE MIR -103 159 14 235 313 56 60 chr5 149464359 149464608 -53620924 + L2 LINE L2 2825 3072 -200 313 300 175 15 chr5 149464873 149465073 -53620459 + MIR SINE MIR 31 262 0 1036 174 0 11 chr5 149465417 149465601 -53619931 + AluSg/x SINE Alu 105 286 -26 651 26 0 0 chr5 149465601 149465678 -53619854 + (CAATA)n Simple_repeat Simple_repeat 2 78 0 24 0 0 0 chr5 149465828 149465852 -53619680 + AT_rich Low_complexity Low_complexity 1 24 0 511 222 20 0 chr5 149466145 149466244 -53619288 - MER63 DNA MER1_type -275 787 687 407 185 12 12 chr5 149466306 149466387 -53619145 - MER5A DNA MER1_type -99 90 10 534 174 76 28 chr5 149466534 149466678 -53618854 + MIR SINE MIR 101 251 -11 219 119 48 0 chr5 149468033 149468075 -53617457 + A-rich Low_complexity Low_complexity 1 44 0 189 107 0 0 chr5 149468643 149468671 -53616861 + (T)n Simple_repeat Simple_repeat 1 28 0 349 256 77 26 chr5 149469317 149469434 -53616098 + L2 LINE L2 3191 3313 0 21 57 0 0 chr5 149469985 149470020 -53615512 + AT_rich Low_complexity Low_complexity 1 35 0 520 254 83 51 chr5 149470048 149470398 -53615134 + L1ME4a LINE L1 5529 5889 -232 527 206 86 127 chr5 149470444 149470735 -53614797 + MER102b DNA MER1_type 33 311 -30 406 209 48 9 chr5 149470816 149470921 -53614611 + L1ME4a LINE L1 6011 6119 -2 2694 7 0 0 chr5 149471145 149471445 -53614087 - AluYa5 SINE Alu -11 300 1 25 0 0 0 chr5 149471780 149471805 -53613727 + AT_rich Low_complexity Low_complexity 1 25 0 417 169 0 14 chr5 149472158 149472229 -53613303 + MER69 DNA AcHobo 2457 2526 0 198 0 0 0 chr5 149472330 149472352 -53613180 + (T)n Simple_repeat Simple_repeat 1 22 0 2107 108 17 0 chr5 149472406 149472702 -53612830 + AluSp SINE Alu 1 301 -12 1030 274 125 39 chr5 149472795 149473259 -53612273 + MLT1J LTR MaLR 1 504 -7 311 245 92 41 chr5 149473264 149473362 -53612170 + L1MD3 LINE L1 2111 2213 -3933 505 146 100 27 chr5 149473369 149473479 -53612053 + MER58B DNA MER1_type 191 308 -33 1057 108 0 0 chr5 149473479 149473618 -53611914 + AluSg SINE Alu 1 139 -171 355 111 0 0 chr5 149473622 149473676 -53611856 + Alu SINE Alu 248 301 0 2076 85 13 13 chr5 149473688 149473993 -53611539 + AluSq SINE Alu 1 305 -8 305 43 0 87 chr5 149473993 149474039 -53611493 + MER58B DNA MER1_type 300 341 0 520 259 39 57 chr5 149474047 149474142 -53611390 + L1MD3 LINE L1 2737 2832 -3314 2039 142 3 0 chr5 149474142 149474445 -53611087 + AluSx SINE Alu 1 304 -8 520 259 39 57 chr5 149474445 149474755 -53610777 + L1MD3 LINE L1 2832 3135 -3011 1740 179 0 7 chr5 149474763 149475070 -53610462 + AluJo SINE Alu 1 305 -7 348 121 0 15 chr5 149475113 149475179 -53610353 - MLT1H1 LTR MaLR 0 542 478 1975 121 6 25 chr5 149475179 149475493 -53610039 + AluSx SINE Alu 1 308 -4 472 155 28 0 chr5 149475502 149475573 -53609959 + AluJ/FLAM SINE Alu 1 73 -239 1472 168 18 31 chr5 149475645 149475931 -53609601 + AluJo SINE Alu 1 282 -30 216 97 0 0 chr5 149475934 149475965 -53609567 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 499 268 118 43 chr5 149475969 149476415 -53609117 - MLT1H1 LTR MaLR -53 502 1 1283 249 55 69 chr5 149476459 149476856 -53608676 + L1MD3 LINE L1 3464 3865 -4130 2177 119 0 0 chr5 149476856 149477167 -53608365 + AluSx SINE Alu 1 311 -1 1283 249 55 69 chr5 149477167 149477498 -53608034 + L1MD3 LINE L1 3865 4199 -3796 2040 100 0 38 chr5 149477498 149477817 -53607715 + AluSc SINE Alu 1 307 -2 1283 249 55 69 chr5 149477817 149478110 -53607422 + L1MD3 LINE L1 4199 4495 -3500 1576 199 3 3 chr5 149478110 149478411 -53607121 + AluJb SINE Alu 1 301 -11 1283 249 55 69 chr5 149478411 149478488 -53607044 + L1MD3 LINE L1 4495 7995 0 1917 127 47 3 chr5 149478617 149478916 -53606616 + AluSx SINE Alu 1 312 0 384 147 73 0 chr5 149479402 149479470 -53606062 - L2 LINE L2 0 3272 3200 2369 72 0 7 chr5 149481176 149481481 -53604051 + AluY SINE Alu 1 303 -8 1665 149 34 0 chr5 149481605 149481867 -53603665 + AluSx SINE Alu 3 273 -39 216 0 0 0 chr5 149481876 149481900 -53603632 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 372 290 43 59 chr5 149481901 149482087 -53603445 + L1MC/D LINE L1 5431 5613 -2195 1116 130 0 0 chr5 149482087 149482249 -53603283 - AluSp SINE Alu -16 297 136 228 143 0 0 chr5 149482249 149482291 -53603241 + (TA)n Simple_repeat Simple_repeat 1 42 0 2162 105 0 0 chr5 149482293 149482587 -53602945 - AluSx SINE Alu -18 294 1 979 116 7 0 chr5 149482594 149482732 -53602800 - AluSq/x SINE Alu -173 139 1 2157 66 16 26 chr5 149482796 149483100 -53602432 + AluSp SINE Alu 1 301 -12 1012 153 0 0 chr5 149483185 149483348 -53602184 + AluJb SINE Alu 141 303 -9 270 167 0 91 chr5 149483348 149483414 -53602118 + L1MC/D LINE L1 5696 5755 -2053 2271 86 0 7 chr5 149483518 149483821 -53601711 - AluSq SINE Alu -12 301 1 1891 60 42 46 chr5 149484054 149484364 -53601168 + AluY SINE Alu 1 309 0 196 333 0 43 chr5 149484795 149484888 -53600644 - L3 LINE CR1 -10 1567 1479 1925 122 13 7 chr5 149485013 149485369 -53600163 + AluSx SINE Alu 1 358 0 237 286 35 0 chr5 149486463 149486548 -53598984 + MIR SINE MIR 62 150 -58 * 406 284 113 40 chr5 149486542 149486630 -53598902 + MIR SINE MIR 13 93 -169 2318 81 7 0 chr5 149486630 149486940 -53598592 - AluSp SINE Alu -1 312 1 406 284 113 40 chr5 149486940 149487073 -53598459 + MIR SINE MIR 93 250 -12 976 254 139 53 chr5 149487080 149487192 -53598340 - MER34 LTR ERV1 -2 540 439 1438 126 195 8 chr5 149487192 149487438 -53598094 + AluJb SINE Alu 1 292 -10 976 254 139 53 chr5 149487438 149487777 -53597755 - MER34 LTR ERV1 -103 439 50 2126 112 3 0 chr5 149487785 149488088 -53597444 + AluSx SINE Alu 9 312 0 426 205 12 0 chr5 149488688 149488771 -53596761 - MER91A DNA MER1_type -105 91 8 216 0 0 0 chr5 149489499 149489523 -53596009 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2110 93 0 0 chr5 149489525 149489805 -53595727 - AluSc SINE Alu -27 282 3 268 291 11 74 chr5 149489881 149489893 -53595639 + L1ME LINE L1 5590 5601 -520 1770 152 10 10 chr5 149489893 149490202 -53595330 + AluSx SINE Alu 1 309 -3 268 291 11 74 chr5 149490202 149490378 -53595154 + L1ME LINE L1 5601 5766 -355 697 175 0 0 chr5 149490386 149490500 -53595032 + FLAM_C SINE Alu 5 118 -25 24 32 0 0 chr5 149490500 149490531 -53595001 + AT_rich Low_complexity Low_complexity 1 31 0 647 194 125 56 chr5 149490583 149490799 -53594733 + MIR SINE MIR 2 232 -30 391 265 12 0 chr5 149490855 149490938 -53594594 - L2 LINE L2 0 3313 3230 1976 121 7 20 chr5 149491203 149491508 -53594024 + AluSx SINE Alu 1 301 -11 1748 62 0 4 chr5 149491508 149491733 -53593799 + AluY SINE Alu 1 224 -87 371 150 16 2 chr5 149491740 149491811 -53593721 - Alu SINE Alu -2 300 238 431 269 123 18 chr5 149492838 149493009 -53592523 - MIR SINE MIR -70 192 4 2153 154 52 113 chr5 149493169 149493305 -53592227 + MLT1D LTR MaLR 1 144 -361 849 119 0 0 chr5 149493305 149493423 -53592109 + FLAM_C SINE Alu 1 118 -15 2153 154 52 113 chr5 149493423 149493448 -53592084 + MLT1D LTR MaLR 144 169 -336 2137 104 0 7 chr5 149493448 149493788 -53591744 + AluY SINE Alu 1 311 0 2186 94 0 29 chr5 149493790 149494099 -53591433 + AluSp SINE Alu 2 301 -12 2153 154 52 113 chr5 149494099 149494471 -53591061 + MLT1D LTR MaLR 170 505 0 362 256 13 0 chr5 149494924 149495002 -53590530 + L2 LINE L2 3235 3313 0 303 380 0 0 chr5 149495072 149495214 -53590318 + (CA)n Simple_repeat Simple_repeat 1 142 0 507 288 25 9 chr5 149495667 149495874 -53589658 + MIR SINE MIR 3 211 -51 1927 145 6 3 chr5 149495945 149496256 -53589276 + AluJb SINE Alu 1 312 0 225 225 0 124 chr5 149496385 149496474 -53589058 + MIR SINE MIR 56 138 -70 1768 138 22 22 chr5 149496990 149497301 -53588231 + AluSx SINE Alu 1 311 -1 238 289 115 29 chr5 149498051 149498155 -53587377 + MIR SINE MIR 34 146 -62 1610 145 36 46 chr5 149499027 149499189 -53586343 - AluSx SINE Alu -6 306 147 2342 78 0 0 chr5 149499189 149499483 -53586049 - AluSg SINE Alu -16 294 1 1610 145 36 46 chr5 149499483 149499624 -53585908 - AluSx SINE Alu -165 147 6 500 224 18 85 chr5 149500109 149500150 -53585382 + MER5B DNA MER1_type 25 67 -111 2441 53 0 0 chr5 149500150 149500454 -53585078 + AluY SINE Alu 2 305 -6 500 224 18 85 chr5 149500454 149500577 -53584955 + MER5B DNA MER1_type 67 178 0 922 285 89 30 chr5 149501278 149501771 -53583761 + L2 LINE L2 2768 3287 -26 467 201 118 12 chr5 149501771 149501940 -53583592 - L1MD3 LINE L1 -1 7994 7808 1948 139 12 15 chr5 149501961 149502291 -53583241 - LTR39 LTR ERV1 -63 720 392 840 170 0 50 chr5 149502408 149502567 -53582965 - LTR39 LTR ERV1 -388 395 245 2516 93 0 0 chr5 149502794 149503104 -53582428 - AluY SINE Alu -1 310 1 691 123 0 18 chr5 149503104 149503209 -53582323 - AluJo/FRAM SINE Alu -15 297 193 4028 197 97 67 chr5 149503209 149503748 -53581784 - L1MC4 LINE L1 -302 7740 7219 2266 103 0 3 chr5 149503748 149504049 -53581483 - AluSg SINE Alu -10 300 1 4028 197 97 67 chr5 149504049 149504231 -53581301 - L1MC4 LINE L1 -823 7219 7044 1619 192 7 20 chr5 149504231 149504533 -53580999 + AluJb SINE Alu 6 303 -9 4028 197 97 67 chr5 149504533 149505063 -53580469 - L1MC4 LINE L1 -998 7044 6450 1092 256 92 26 chr5 149505066 149505492 -53580040 - MLT1C LTR MaLR 0 467 14 319 184 126 0 chr5 149505499 149505586 -53579946 - L1MC4a LINE L1 -1373 6435 6338 320 49 0 0 chr5 149505592 149505633 -53579899 - MER4E LTR ERV1 -72 694 654 575 222 74 119 chr5 149505637 149505763 -53579769 - L1MC4a LINE L1 -1458 6350 6220 2608 47 0 0 chr5 149505763 149506062 -53579470 - AluY SINE Alu -12 299 1 575 222 74 119 chr5 149506062 149506317 -53579215 - L1MC4a LINE L1 -1588 6220 5989 2462 76 0 3 chr5 149506317 149506618 -53578914 + AluSc SINE Alu 1 300 -9 575 222 74 119 chr5 149506618 149506681 -53578851 - L1MC4a LINE L1 -1819 5989 5925 1280 257 63 5 chr5 149506697 149506744 -53578788 - L1MC4a LINE L1 -225 6017 5974 1508 179 47 14 chr5 149506744 149507023 -53578509 - AluJo SINE Alu -24 288 1 1280 257 63 5 chr5 149507023 149507373 -53578159 - L1MC4a LINE L1 -268 5974 5584 1767 213 62 17 chr5 149507373 149507628 -53577904 - MLT1D LTR MaLR 0 505 263 1974 110 62 17 chr5 149507628 149507793 -53577739 - AluSx SINE Alu -8 304 119 2442 97 3 0 chr5 149507793 149508103 -53577429 - AluSx SINE Alu -1 311 1 1974 110 62 17 chr5 149508103 149508228 -53577304 - AluSx SINE Alu -193 119 1 1767 213 62 17 chr5 149508228 149508455 -53577077 - MLT1D LTR MaLR -242 263 1 2032 123 3 52 chr5 149508860 149509186 -53576346 + AluSx SINE Alu 1 310 -2 276 213 278 9 chr5 149509231 149509339 -53576193 + L3 LINE CR1 1376 1512 -65 2347 92 7 3 chr5 149509410 149509713 -53575819 - AluSp SINE Alu -9 304 1 1155 201 29 5 chr5 149509719 149510096 -53575436 - L1MD2 LINE L1 -15 6344 5910 884 184 5 32 chr5 149510096 149510281 -53575251 - MER3 DNA MER1_type -29 180 1 1296 233 30 41 chr5 149510370 149510945 -53574587 - MLT1F LTR MaLR 0 542 1 2219 103 0 0 chr5 149511339 149511650 -53573882 + AluSx SINE Alu 1 311 0 2475 92 0 0 chr5 149511701 149512004 -53573528 + AluSq SINE Alu 1 303 -10 328 254 57 94 chr5 149512147 149512391 -53573141 + L2 LINE L2 3000 3234 -38 786 233 9 51 chr5 149512588 149512803 -53572729 - MER20 DNA MER1_type 0 219 14 203 178 22 44 chr5 149512869 149512914 -53572618 + MIR SINE MIR 107 150 -58 2646 51 0 25 chr5 149513232 149513546 -53571986 - AluY SINE Alu -5 306 1 1657 141 19 22 chr5 149513913 149514183 -53571349 + AluJo SINE Alu 38 306 -6 247 262 24 71 chr5 149514202 149514305 -53571227 + L2 LINE L2 2491 2589 -725 2112 155 66 20 chr5 149514305 149514712 -53570820 + MSTB LTR MaLR 1 426 0 247 262 24 71 chr5 149514712 149514734 -53570798 + L2 LINE L2 2589 2610 -704 524 259 137 61 chr5 149514738 149515117 -53570415 - MLT1H1 LTR MaLR -102 453 46 2286 114 3 3 chr5 149515218 149515525 -53570007 - AluSx SINE Alu -5 307 1 2123 122 3 35 chr5 149515609 149515921 -53569611 - AluSx SINE Alu -10 302 1 734 247 196 0 chr5 149515921 149516181 -53569351 + L2 LINE L2 2997 3313 0 1501 90 21 43 chr5 149516240 149516273 -53569259 - MER61E LTR ERV1 -157 412 380 5440 53 14 1 chr5 149516273 149516987 -53568545 - L1PA8 LINE L1 0 6172 5450 1501 90 21 43 chr5 149516987 149517187 -53568345 - MER61E LTR ERV1 -189 380 184 1178 161 167 43 chr5 149517178 149517477 -53568055 + MSTD LTR MaLR 61 396 0 * 2331 89 7 10 chr5 149517593 149517896 -53567636 + AluSx SINE Alu 1 302 -10 335 321 18 55 chr5 149517906 149518071 -53567461 + MER5A DNA MER1_type 21 179 -10 2715 67 0 0 chr5 149518228 149518585 -53566947 + L1PA6 LINE L1 5798 6154 0 1739 135 0 99 chr5 149518585 149518897 -53566635 - AluJo SINE Alu -31 281 1 1303 70 0 0 chr5 149518930 149519126 -53566406 + AluY SINE Alu 134 311 0 1620 201 0 7 chr5 149520170 149520477 -53565055 - AluJo SINE Alu 0 305 1 609 158 12 133 chr5 149520477 149520642 -53564890 - MER65B LTR ERV1 -386 145 1 1253 236 69 102 chr5 149520677 149521185 -53564347 - MER77 LTR ERV1 -74 531 41 2666 121 0 45 chr5 149521306 149521752 -53563780 + MSTB LTR MaLR 1 426 0 2602 66 0 0 chr5 149521836 149522141 -53563391 - AluY SINE Alu -6 305 1 370 332 102 15 chr5 149522165 149522308 -53563224 - L2 LINE L2 0 3313 3184 2311 64 39 0 chr5 149522308 149522588 -53562944 - AluSp SINE Alu -22 291 1 370 332 102 15 chr5 149522588 149522778 -53562754 - L2 LINE L2 -129 3184 2951 272 343 103 0 chr5 149522812 149522958 -53562574 - MER91A DNA MER1_type -30 166 6 938 197 0 0 chr5 149523684 149523831 -53561701 + AluJo SINE Alu 1 147 -165 2565 64 0 22 chr5 149523834 149524147 -53561385 + AluSg SINE Alu 5 310 0 428 74 0 0 chr5 149524149 149524203 -53561329 - AluSq SINE Alu -108 205 152 886 195 18 0 chr5 149524220 149524384 -53561148 - MLT1A1 LTR MaLR 0 365 199 5383 121 20 138 chr5 149524385 149524891 -53560641 - L1PA16 LINE L1 0 6166 5602 2331 115 0 0 chr5 149524891 149525187 -53560345 - AluSg SINE Alu -14 296 1 5383 121 20 138 chr5 149525187 149525464 -53560068 - L1PA16 LINE L1 -564 5602 5294 2326 100 3 3 chr5 149525464 149525765 -53559767 - AluSx SINE Alu -11 301 1 5383 121 20 138 chr5 149525765 149525831 -53559701 - L1PA16 LINE L1 -872 5294 5222 2366 75 4 0 chr5 149525831 149526112 -53559420 - AluSx SINE Alu -30 282 1 5383 121 20 138 chr5 149526112 149526313 -53559219 - L1PA16 LINE L1 -944 5222 4999 1409 158 0 0 chr5 149526313 149526539 -53558993 - AluJo SINE Alu 0 307 82 5383 121 20 138 chr5 149526539 149527166 -53558366 - L1PA16 LINE L1 -1167 4999 4507 478 243 52 15 chr5 149527166 149527352 -53558180 - MLT1A1 LTR MaLR -139 226 2 1359 175 16 69 chr5 149527395 149527721 -53557811 - MLT1D LTR MaLR 0 505 206 647 143 0 122 chr5 149527765 149527833 -53557699 - MLT1D LTR MaLR -270 235 193 2386 106 0 0 chr5 149527833 149528136 -53557396 + AluSx SINE Alu 1 303 -9 647 143 0 122 chr5 149528136 149528214 -53557318 - MLT1D LTR MaLR -312 193 107 841 181 12 0 chr5 149528216 149528376 -53557156 + L1MA9 LINE L1 5907 6068 -244 472 160 0 20 chr5 149528373 149528473 -53557059 + L1 LINE L1 5235 5332 -814 * 921 158 0 0 chr5 149528474 149528607 -53556925 + AluSq/x SINE Alu 1 133 -180 637 103 0 0 chr5 149528607 149528704 -53556828 + L1P LINE L1 5317 5413 -753 * 1007 201 42 42 chr5 149528703 149528967 -53556565 + L1MA10 LINE L1 6064 6327 -7 376 200 0 0 chr5 149528990 149529055 -53556477 - MLT1D LTR MaLR -440 65 1 2300 99 0 0 chr5 149529152 149529455 -53556077 - AluSq SINE Alu 0 305 3 2036 131 3 0 chr5 149529792 149530107 -53555425 + AluSx SINE Alu 1 316 0 2379 90 10 19 chr5 149530216 149530528 -53555004 + AluSg SINE Alu 1 309 -1 282 255 59 10 chr5 149531404 149531506 -53554026 - MLT1K LTR MaLR -34 554 448 260 221 12 128 chr5 149531661 149531747 -53553785 - MLT1K LTR MaLR -396 192 117 312 141 78 16 chr5 149532149 149532213 -53553319 - MLT1K LTR MaLR -342 246 179 740 217 0 0 chr5 149532332 149532484 -53553048 - FRAM SINE Alu -14 152 1 2379 96 7 0 chr5 149532508 149532811 -53552721 - AluSp SINE Alu -8 305 1 218 286 12 48 chr5 149532859 149532943 -53552589 - MIR SINE MIR -80 128 48 2061 139 0 19 chr5 149532996 149533312 -53552220 - AluSx SINE Alu -2 310 1 29 47 0 0 chr5 149534932 149534975 -53550557 + GC_rich Low_complexity Low_complexity 1 43 0 215 238 16 33 chr5 149534994 149535116 -53550416 + (CCG)n Simple_repeat Simple_repeat 3 122 0 309 329 36 22 chr5 149535950 149536087 -53549445 + MIR SINE MIR 110 248 -14 197 273 42 112 chr5 149536500 149536643 -53548889 + L2 LINE L2 3137 3269 -3 238 211 0 0 chr5 149536693 149536745 -53548787 + L2 LINE L2 3262 3313 0 1899 162 0 3 chr5 149536794 149537090 -53548442 - AluSx SINE Alu -17 295 1 2217 106 0 10 chr5 149538037 149538339 -53547193 - AluSg1 SINE Alu -10 299 1 246 320 140 22 chr5 149538388 149538566 -53546966 - MIR SINE MIR -17 245 47 596 286 65 14 chr5 149538986 149539203 -53546329 - MIR SINE MIR -24 238 11 203 161 0 0 chr5 149539644 149539675 -53545857 + (TG)n Simple_repeat Simple_repeat 1 31 0 317 299 10 0 chr5 149539959 149540056 -53545476 - LTR33 LTR ERVL -2 519 422 1072 200 85 22 chr5 149540086 149540356 -53545176 - LTR33 LTR ERVL -230 291 5 197 281 101 11 chr5 149540373 149540462 -53545070 - MIR SINE MIR -4 258 162 865 118 0 22 chr5 149540610 149540745 -53544787 - FLAM_C SINE Alu 0 133 2 209 242 16 16 chr5 149540926 149540988 -53544544 + MER5A DNA MER1_type 123 184 -5 1236 101 6 12 chr5 149541230 149541398 -53544134 - AluSg/x SINE Alu -22 290 124 2451 93 0 10 chr5 149541680 149541993 -53543539 - AluSp SINE Alu -3 310 1 1922 116 26 52 chr5 149542039 149542349 -53543183 - AluSx SINE Alu 0 312 11 684 282 109 26 chr5 149542355 149542695 -53542837 - L1ME LINE L1 -298 5823 5456 242 191 0 0 chr5 149543048 149543095 -53542437 - L2 LINE L2 0 3313 3267 324 87 0 0 chr5 149546234 149546280 -53539252 + L2 LINE L2 3267 3312 -1 240 250 29 0 chr5 149546441 149546509 -53539023 - L2 LINE L2 -1 3271 3202 2401 106 3 0 chr5 149547509 149547820 -53537712 - AluSp SINE Alu -1 312 1 613 121 0 81 chr5 149547822 149547946 -53537586 - L1PB4 LINE L1 -2 6154 6041 230 336 72 16 chr5 149549142 149549267 -53536265 - L2 LINE L2 -5 3267 3136 2320 96 7 3 chr5 149549813 149550114 -53535418 + AluSp SINE Alu 1 302 -11 2224 128 0 0 chr5 149550115 149550413 -53535119 + AluSx SINE Alu 1 298 -14 224 291 39 48 chr5 149550523 149550626 -53534906 - L2 LINE L2 -9 3304 3203 2079 88 0 28 chr5 149550980 149551263 -53534269 - AluSg SINE Alu -6 304 30 1454 140 5 0 chr5 149551263 149551470 -53534062 - AluSx SINE Alu -104 208 1 3867 215 98 32 chr5 149551490 149552123 -53533409 - L1MC4a LINE L1 0 7808 7218 1691 141 0 0 chr5 149552123 149552379 -53533153 - AluSx SINE Alu -56 256 1 3867 215 98 32 chr5 149552379 149552390 -53533142 - L1MC4a LINE L1 -590 7218 7209 1773 156 3 10 chr5 149552390 149552698 -53532834 - AluJb SINE Alu -6 306 1 3867 215 98 32 chr5 149552698 149553089 -53532443 - L1MC4a LINE L1 -599 7209 6696 1993 112 31 0 chr5 149553089 149553375 -53532157 + AluSg SINE Alu 1 295 -15 3867 215 98 32 chr5 149553375 149553414 -53532118 - L1MC4a LINE L1 -1112 6696 6661 1930 124 38 0 chr5 149554105 149554395 -53531137 - AluSx SINE Alu -11 301 1 970 168 78 6 chr5 149554518 149554697 -53530835 - LTR47A LTR ERVL 0 452 261 1920 146 7 0 chr5 149554820 149555121 -53530411 - AluSx SINE Alu -9 303 1 794 140 0 0 chr5 149555191 149555305 -53530227 + AluJb SINE Alu 2 115 -197 414 0 0 0 chr5 149555305 149555351 -53530181 + (CA)n Simple_repeat Simple_repeat 2 47 0 1938 151 107 28 chr5 149555375 149555410 -53530122 - MSTA LTR MaLR -5 423 392 1682 159 3 20 chr5 149555410 149555712 -53529820 + AluJb SINE Alu 1 297 -15 1938 151 107 28 chr5 149555712 149556068 -53529464 - MSTA LTR MaLR -36 392 1 596 249 26 74 chr5 149556202 149556496 -53529036 - L1MC5 LINE L1 -26 7935 7659 2260 88 7 0 chr5 149556496 149556801 -53528731 - AluSp SINE Alu -4 309 3 596 249 26 74 chr5 149556801 149556856 -53528676 - L1MC5 LINE L1 -302 7659 7603 2194 113 0 0 chr5 149556863 149557163 -53528369 - AluSq SINE Alu -13 300 1 1856 68 0 0 chr5 149557240 149557477 -53528055 - AluSg SINE Alu -11 299 63 21 0 0 0 chr5 149557893 149557914 -53527618 + AT_rich Low_complexity Low_complexity 1 21 0 486 219 98 31 chr5 149558637 149558819 -53526713 + L1ME1 LINE L1 5941 6131 -31 2359 80 0 6 chr5 149558819 149559131 -53526401 + AluSg SINE Alu 1 310 0 1718 156 24 0 chr5 149559513 149559808 -53525724 - AluJb SINE Alu -2 310 9 936 210 130 23 chr5 149560121 149560383 -53525149 + AluSg SINE Alu 12 301 -9 293 237 103 39 chr5 149560663 149560819 -53524713 - HAL1 LINE L1 -2 2505 2340 2076 134 0 0 chr5 149561478 149561783 -53523749 - AluSx SINE Alu -5 307 3 782 143 56 0 chr5 149561881 149562007 -53523525 - FLAM_C SINE Alu -3 140 8 2205 101 3 0 chr5 149562025 149562323 -53523209 - AluSx SINE Alu -13 299 1 1371 223 3 0 chr5 149562789 149563085 -53522447 + AluSx SINE Alu 2 298 -14 432 228 47 24 chr5 149563104 149563231 -53522301 + FLAM_C SINE Alu 8 137 -6 414 306 8 0 chr5 149563328 149563462 -53522070 + AluSq/x SINE Alu 3 137 -176 1624 94 8 37 chr5 149563570 149563814 -53521718 + AluSg/x SINE Alu 75 311 -1 193 318 0 32 chr5 149563875 149563938 -53521594 - MIR SINE MIR -21 241 181 1410 154 75 31 chr5 149563978 149564270 -53521262 - AluJo SINE Alu -7 305 1 2043 112 3 7 chr5 149564281 149564584 -53520948 - AluSq SINE Alu -11 302 1 328 286 95 9 chr5 149564585 149564690 -53520842 - MIR SINE MIR -112 150 37 21 0 0 0 chr5 149618337 149618358 -53467174 + AT_rich Low_complexity Low_complexity 1 21 0 430 235 92 30 chr5 149619081 149619263 -53466269 + L1ME1 LINE L1 5941 6130 -34 1643 105 0 21 chr5 149619264 149619503 -53466029 + AluSg SINE Alu 1 234 -76 3669 133 27 10 chr5 149620557 149621181 -53464351 - MER41B LTR ERV1 0 635 1 251 290 32 0 chr5 149621357 149621450 -53464082 - MIR SINE MIR -117 145 50 360 229 299 6 chr5 149621738 149621895 -53463637 - MIR SINE MIR -58 204 2 388 208 50 20 chr5 149621905 149622006 -53463526 + MER34 LTR ERV1 11 114 -428 2151 177 36 19 chr5 149622167 149622635 -53462897 + MER34B LTR ERV1 84 559 -6 184 291 0 0 chr5 149623990 149624045 -53461487 + L2 LINE L2 2921 2975 -338 208 139 0 0 chr5 149624255 149624291 -53461241 + L2 LINE L2 3137 3172 -100 369 322 46 17 chr5 149624951 149625125 -53460407 - L2 LINE L2 -21 3251 3073 210 143 0 0 chr5 149625281 149625316 -53460216 + (TG)n Simple_repeat Simple_repeat 1 35 0 467 165 13 0 chr5 149625579 149625658 -53459874 - MER33 DNA MER1_type -244 80 1 1718 244 72 42 chr5 149626008 149626620 -53458912 - L2 LINE L2 -10 3303 2648 1661 244 82 19 chr5 149626620 149627209 -53458323 - MLT1E2 LTR MaLR 0 626 1 1718 244 72 42 chr5 149627209 149627493 -53458039 - L2 LINE L2 -665 2648 2374 25 0 0 0 chr5 149627869 149627894 -53457638 + AT_rich Low_complexity Low_complexity 1 25 0 547 70 0 0 chr5 149627946 149628017 -53457515 + LTR32 LTR ERVL 18 88 -383 1284 137 27 69 chr5 149628028 149628106 -53457426 + LTR32 LTR ERVL 221 301 -170 2355 113 0 0 chr5 149628106 149628407 -53457125 - AluSx SINE Alu -11 301 1 1284 137 27 69 chr5 149628407 149628590 -53456942 + LTR32 LTR ERVL 301 471 0 1614 142 19 85 chr5 149629224 149629540 -53455992 - AluJo SINE Alu -17 295 1 303 216 0 0 chr5 149629608 149629659 -53455873 + L1MC4 LINE L1 6653 6703 -1339 1078 249 148 30 chr5 149629717 149630318 -53455214 - L2 LINE L2 -8 3305 2636 421 167 103 63 chr5 149630430 149630556 -53454976 - MLT1C LTR MaLR -329 138 8 378 279 36 9 chr5 149630641 149630752 -53454780 - L2 LINE L2 0 3313 3200 184 136 23 23 chr5 149631358 149631402 -53454130 + L2 LINE L2 3016 3059 -213 2541 84 0 0 chr5 149631488 149631799 -53453733 - AluY SINE Alu 0 311 1 426 39 0 0 chr5 149632249 149632301 -53453231 + (CA)n Simple_repeat Simple_repeat 1 52 0 545 294 85 32 chr5 149632898 149633146 -53452386 + MIR SINE MIR 2 262 0 201 246 18 53 chr5 149633280 149633337 -53452195 + L2 LINE L2 3213 3267 -5 304 330 10 0 chr5 149633513 149633616 -53451916 + MIR SINE MIR 37 140 -122 555 168 0 0 chr5 149633622 149633717 -53451815 + FLAM_C SINE Alu 40 134 -9 186 191 0 0 chr5 149636415 149636457 -53449075 + GA-rich Low_complexity Low_complexity 3 44 0 2373 196 48 0 chr5 149637102 149637597 -53447935 - LTR53 LTR ERVL 0 519 1 2451 87 10 3 chr5 149638065 149638375 -53447157 + AluSx SINE Alu 1 312 0 480 312 63 42 chr5 149639070 149639307 -53446225 - L1ME4a LINE L1 0 6121 5880 389 234 42 108 chr5 149639308 149639475 -53446057 - L1ME4a LINE L1 -304 5817 5662 468 248 47 16 chr5 149639665 149639794 -53445738 - MIR SINE MIR -77 185 53 851 251 76 38 chr5 149640507 149640849 -53444683 + MLT1B LTR MaLR 1 355 -35 2241 103 10 3 chr5 149641725 149642016 -53443516 - AluSx SINE Alu -19 293 1 590 213 73 13 chr5 149642026 149642176 -53443356 + L2 LINE L2 3155 3313 0 228 282 68 0 chr5 149642366 149642480 -53443052 - MIR SINE MIR -69 139 24 205 243 0 0 chr5 149642787 149642824 -53442708 + polypyrimidine Low_complexity Low_complexity 2 38 0 1377 219 35 27 chr5 149643938 149644308 -53441224 + MLT1A2 LTR MaLR 2 374 0 1169 176 5 0 chr5 149644542 149644729 -53440803 + AluSg/x SINE Alu 110 297 -13 3318 125 33 18 chr5 149644729 149645281 -53440251 + LTR26 LTR ERV1 44 603 0 567 288 100 28 chr5 149645371 149645690 -53439842 + L1ME LINE L1 5401 5742 -379 207 0 0 0 chr5 149645886 149645909 -53439623 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3375 232 80 42 chr5 149645913 149647291 -53438241 - HAL1 LINE L1 -44 2463 1034 986 109 63 11 chr5 149647290 149647304 -53438228 - L1MC/D LINE L1 -728 5605 5593 * 189 0 0 0 chr5 149647304 149647325 -53438207 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 986 109 63 11 chr5 149647325 149647485 -53438047 - L1MC/D LINE L1 -740 5593 5422 522 0 0 0 chr5 149647489 149647547 -53437985 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 1392 195 64 0 chr5 149647549 149647800 -53437732 - AluJb SINE Alu -33 279 13 594 170 64 14 chr5 149647821 149647962 -53437570 - L1MC/D LINE L1 -2358 5427 5280 * 612 235 116 50 chr5 149647960 149648237 -53437295 - HAL1 LINE L1 -2162 345 51 510 224 60 9 chr5 149648241 149648357 -53437175 - L1ME4a LINE L1 -2246 5562 5441 572 206 132 88 chr5 149648372 149648600 -53436932 - MLT1L LTR MaLR -333 282 45 556 273 117 24 chr5 149648829 149649034 -53436498 + MIR SINE MIR 20 243 -19 232 286 14 0 chr5 149649149 149649219 -53436313 + L2 LINE L2 3200 3270 -2 203 211 0 0 chr5 149650208 149650246 -53435286 - L2 LINE L2 -19 3294 3257 1275 171 0 0 chr5 149651924 149652123 -53433409 + Tigger7 DNA MER2_type 1 199 -506 444 174 98 0 chr5 149652166 149652258 -53433274 + Tigger7 DNA MER2_type 2482 2582 -5 880 224 185 33 chr5 149652287 149652617 -53432915 - MLT1C LTR MaLR -29 438 97 875 279 98 37 chr5 149652894 149653413 -53432119 + L1MC4 LINE L1 6806 7356 -686 2323 102 0 16 chr5 149653705 149654019 -53431513 + AluSp SINE Alu 1 309 -4 2263 124 0 0 chr5 149655205 149655511 -53430021 - AluJb SINE Alu -6 306 1 1705 150 15 142 chr5 149655564 149655781 -53429751 + MER57A LTR ERV1 1 131 -272 2254 108 16 0 chr5 149655781 149656088 -53429444 + AluSq SINE Alu 1 312 -1 1705 150 15 142 chr5 149656088 149656329 -53429203 + MER57A LTR ERV1 131 401 -2 642 277 108 40 chr5 149656533 149656905 -53428627 - MLT1K LTR MaLR -4 584 188 1332 289 199 17 chr5 149656942 149657997 -53427535 + L2 LINE L2 2033 3302 -11 752 122 0 0 chr5 149658257 149658364 -53427168 + AluY SINE Alu 205 311 0 1867 163 23 0 chr5 149658750 149659050 -53426482 - AluJb SINE Alu -2 310 4 1064 210 130 23 chr5 149659358 149659620 -53425912 + AluSg SINE Alu 12 301 -9 267 256 96 32 chr5 149659900 149660056 -53425476 - HAL1 LINE L1 -2 2505 2340 2232 134 0 0 chr5 149660715 149661020 -53424512 - AluSx SINE Alu -5 307 3 806 143 56 0 chr5 149661118 149661244 -53424288 - FLAM_C SINE Alu -3 140 8 2318 100 3 3 chr5 149661262 149661561 -53423971 - AluSx SINE Alu -13 299 1 2318 98 6 28 chr5 149662027 149662344 -53423188 + AluSx SINE Alu 2 311 -1 192 318 0 32 chr5 149662405 149662468 -53423064 - MIR SINE MIR -21 241 181 1457 172 57 27 chr5 149662508 149662804 -53422728 - AluJo SINE Alu -7 305 1 2158 118 3 7 chr5 149662815 149663119 -53422413 - AluSq SINE Alu -10 303 1 331 286 95 9 chr5 149663120 149663225 -53422307 - MIR SINE MIR -112 150 37 23 0 0 0 chr5 149665888 149665911 -53419621 + AT_rich Low_complexity Low_complexity 1 23 0 1927 197 51 35 chr5 149665962 149666509 -53419023 - MLT1E3 LTR MaLR -2 622 68 776 99 0 18 chr5 149666562 149666673 -53418859 - AluSp/q SINE Alu -17 296 188 1705 106 4 9 chr5 149666673 149666899 -53418633 - AluSp SINE Alu -88 225 1 824 169 15 0 chr5 149667216 149667352 -53418180 - FRAM SINE Alu -19 157 20 201 245 50 115 chr5 149668242 149668304 -53417228 + L2 LINE L2 3061 3125 -188 2026 65 35 0 chr5 149668304 149668565 -53416967 - AluSx SINE Alu -14 298 29 201 245 50 115 chr5 149668565 149668702 -53416830 + L2 LINE L2 3125 3247 -66 332 297 57 40 chr5 149670211 149670386 -53415146 - L2 LINE L2 -19 3294 3117 220 313 31 16 chr5 149670642 149670706 -53414826 - L2 LINE L2 -34 3238 3174 488 235 121 74 chr5 149671113 149671435 -53414097 + MLT1J2 LTR MaLR 82 442 -4 377 314 169 39 chr5 149671852 149672059 -53413473 - L1MC4 LINE L1 -1 8041 7808 2089 135 0 0 chr5 149672073 149672355 -53413177 + AluSx SINE Alu 22 303 -9 266 288 0 0 chr5 149672367 149672447 -53413085 - L1MC5 LINE L1 -271 7690 7611 537 263 219 0 chr5 149673215 149673420 -53412112 + MIR SINE MIR 8 257 -5 325 269 97 21 chr5 149673706 149673851 -53411681 + MIR SINE MIR 87 242 -20 2449 76 0 0 chr5 149674496 149674786 -53410746 + AluY SINE Alu 1 290 -21 1799 184 0 10 chr5 149674786 149675091 -53410441 - AluJb SINE Alu -10 302 1 2358 92 0 3 chr5 149675096 149675388 -53410144 - AluSq SINE Alu -22 291 1 296 270 61 35 chr5 149677951 149678066 -53407466 + L2 LINE L2 3167 3284 -29 560 284 70 42 chr5 149678585 149678778 -53406754 - MIR SINE MIR -28 234 33 2463 93 0 3 chr5 149678778 149679088 -53406444 - AluSq SINE Alu -4 309 1 560 284 70 42 chr5 149679088 149679109 -53406423 - MIR SINE MIR -229 33 14 275 192 392 0 chr5 149680449 149680579 -53404953 - MIR SINE MIR -6 256 76 914 263 70 53 chr5 149681210 149681625 -53403907 - MLT1J2 LTR MaLR -8 442 21 2191 110 10 0 chr5 149682685 149682975 -53402557 - AluSx SINE Alu -19 293 1 358 257 71 21 chr5 149683215 149683355 -53402177 - L2 LINE L2 -177 3095 2949 2377 59 20 16 chr5 149683713 149684016 -53401516 - AluY SINE Alu -7 304 1 27 29 0 0 chr5 149684106 149684140 -53401392 + AT_rich Low_complexity Low_complexity 1 34 0 2213 103 0 0 chr5 149684918 149685237 -53400295 - AluSx SINE Alu 0 319 1 331 253 110 27 chr5 149685618 149685764 -53399768 - MIR SINE MIR -46 216 59 279 0 0 0 chr5 149686956 149686987 -53398545 + (T)n Simple_repeat Simple_repeat 1 31 0 426 224 19 70 chr5 149687022 149687178 -53398354 + MIR SINE MIR 61 208 -54 415 365 18 6 chr5 149688027 149688194 -53397338 + MIR SINE MIR 83 251 -11 188 284 108 14 chr5 149689851 149689925 -53395607 + L2 LINE L2 3136 3216 -56 614 196 0 7 chr5 149689926 149690069 -53395463 + (TCCA)n Simple_repeat Simple_repeat 2 143 0 250 389 69 9 chr5 149690069 149690285 -53395247 - L2 LINE L2 0 3272 3044 737 270 70 0 chr5 149690377 149690577 -53394955 + MIR SINE MIR 47 260 -2 494 320 154 52 chr5 149691469 149692003 -53393529 + L1M4 LINE L1 2789 3376 -2770 1243 210 72 111 chr5 149692104 149692590 -53392942 + MLT1C LTR MaLR 1 467 0 298 312 22 43 chr5 149693777 149693915 -53391617 - MIR3 SINE MIR -39 169 35 2098 80 52 7 chr5 149697294 149697582 -53387950 - AluSc SINE Alu -8 301 1 1698 180 7 3 chr5 149697598 149697882 -53387650 - AluJb SINE Alu -27 285 1 260 213 131 0 chr5 149698363 149698424 -53387108 - L2 LINE L2 -8 3305 3237 1609 218 136 2 chr5 149698426 149698852 -53386680 - L2 LINE L2 -456 2858 2376 2850 148 44 26 chr5 149698884 149699279 -53386253 - L1MD1 LINE L1 -8 6234 5825 2053 117 17 20 chr5 149699279 149699579 -53385953 - AluSg SINE Alu -1 309 11 2850 148 44 26 chr5 149699579 149699723 -53385809 - L1MD1 LINE L1 -417 5825 5685 338 111 0 0 chr5 149699723 149699777 -53385755 + Alu SINE Alu 247 300 -2 546 153 160 8 chr5 149699777 149699908 -53385624 - L1MDa LINE L1 -3901 2639 2489 992 209 30 5 chr5 149699909 149700110 -53385422 - L1MDa LINE L1 -6310 230 25 2630 230 143 56 chr5 149700162 149701289 -53384243 - L2 LINE L2 -1839 1475 251 22 0 0 0 chr5 149701396 149701418 -53384114 + AT_rich Low_complexity Low_complexity 1 22 0 1199 159 64 118 chr5 149701644 149701940 -53383592 + AluJo SINE Alu 23 302 -10 2269 91 0 3 chr5 149701962 149702259 -53383273 - AluY SINE Alu -12 299 4 288 0 0 0 chr5 149702261 149702293 -53383239 + (T)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr5 149702578 149702599 -53382933 + AT_rich Low_complexity Low_complexity 1 21 0 1767 141 0 112 chr5 149704097 149704445 -53381087 - AluJo SINE Alu -3 309 1 260 199 151 60 chr5 149704830 149704924 -53380608 - L1ME4a LINE L1 -121 6000 5916 2357 116 0 0 chr5 149704924 149705234 -53380298 - AluSx SINE Alu -2 310 1 260 199 151 60 chr5 149705234 149705305 -53380227 - L1ME4a LINE L1 -205 5916 5820 732 182 25 0 chr5 149705305 149705426 -53380106 - FLAM_A SINE Alu -9 124 1 374 342 58 0 chr5 149705668 149705823 -53379709 + MIR3 SINE MIR 39 202 -6 406 283 116 7 chr5 149705973 149706111 -53379421 + MER5A DNA MER1_type 37 189 0 1656 144 8 0 chr5 149706146 149706403 -53379129 - AluJb SINE Alu -10 302 44 25 51 0 0 chr5 149707962 149708001 -53377531 + AT_rich Low_complexity Low_complexity 1 39 0 2617 134 25 39 chr5 149708763 149709005 -53376527 - MSTA LTR MaLR 0 428 193 2121 110 6 55 chr5 149709005 149709331 -53376201 - AluSx SINE Alu -2 310 1 2617 134 25 39 chr5 149709331 149709522 -53376010 - MSTA LTR MaLR -235 193 1 236 286 143 0 chr5 149709596 149709708 -53375824 + L2 LINE L2 3140 3267 -5 201 260 27 27 chr5 149710592 149710665 -53374867 + L2 LINE L2 3157 3229 -43 2359 101 3 0 chr5 149710719 149711016 -53374516 - AluSp SINE Alu -15 298 1 306 269 21 21 chr5 149712205 149712298 -53373234 - L2 LINE L2 -43 3229 3137 686 233 12 12 chr5 149712442 149712605 -53372927 - MIR SINE MIR -88 174 12 2231 233 40 88 chr5 149712716 149713396 -53372136 - L1ME3A LINE L1 0 6170 5562 2119 134 0 0 chr5 149713396 149713686 -53371846 - AluSx SINE Alu -22 290 1 2231 233 40 88 chr5 149713686 149714086 -53371446 - L1ME3A LINE L1 -608 5562 5144 1894 152 31 93 chr5 149714100 149714607 -53370925 - L1ME2 LINE L1 -9 6155 5680 33 25 0 0 chr5 149714607 149714647 -53370885 + AT_rich Low_complexity Low_complexity 1 40 0 585 140 20 10 chr5 149714656 149714756 -53370776 - L1MD1 LINE L1 -9 6233 6133 2076 134 0 3 chr5 149714756 149715055 -53370477 - AluSx SINE Alu -14 298 1 2454 141 59 7 chr5 149715055 149715459 -53370073 + MSTB LTR MaLR 1 425 -1 245 236 0 0 chr5 149715461 149715516 -53370016 - L1MEc LINE L1 -6307 89 35 340 233 0 0 chr5 149716154 149716227 -53369305 - L2 LINE L2 0 3272 3200 414 0 0 0 chr5 149717287 149717333 -53368199 + (TG)n Simple_repeat Simple_repeat 2 47 0 2189 115 0 3 chr5 149717937 149718241 -53367291 + AluSx SINE Alu 1 303 -9 2370 96 0 7 chr5 149719238 149719587 -53365945 + AluSx SINE Alu 1 312 0 234 0 0 0 chr5 149720701 149720727 -53364805 + (CCCCAA)n Simple_repeat Simple_repeat 1 26 0 219 158 0 0 chr5 149721122 149721160 -53364372 - MIR SINE MIR -73 189 152 2067 110 39 0 chr5 149721191 149721472 -53364060 - AluSq SINE Alu -21 292 1 771 179 0 14 chr5 149721496 149721641 -53363891 - AluJ SINE Alu 0 312 170 696 155 0 0 chr5 149721633 149721736 -53363796 - AluJ SINE Alu -189 123 21 * 297 0 0 0 chr5 149721772 149721846 -53363686 + (CA)n Simple_repeat Simple_repeat 1 107 0 297 0 0 0 chr5 149721846 149721879 -53363653 + (CA)n Simple_repeat Simple_repeat 2 34 0 1131 290 60 32 chr5 149722438 149722907 -53362625 + ERVL LTR ERVL 1765 2246 -3518 842 237 95 53 chr5 149722986 149723239 -53362293 + ERVL LTR ERVL 4764 5032 -732 2590 107 30 57 chr5 149723239 149723276 -53362256 - MSTA LTR MaLR 0 428 392 2390 101 0 3 chr5 149723276 149723582 -53361950 + AluSq SINE Alu 1 305 -8 2590 107 30 57 chr5 149723582 149723984 -53361548 - MSTA LTR MaLR -36 392 1 842 237 95 53 chr5 149723984 149724013 -53361519 + ERVL LTR ERVL 5032 5058 -706 333 172 31 0 chr5 149724013 149724077 -53361455 + MLT1K LTR MaLR 508 573 -15 522 211 9 0 chr5 149725437 149725546 -53359986 + MLT2B1 LTR ERVL 1 110 -410 1192 202 0 25 chr5 149725546 149725784 -53359748 - AluJo SINE Alu -1 311 80 1909 137 3 27 chr5 149725784 149726076 -53359456 - AluJb SINE Alu -22 290 6 793 210 83 106 chr5 149726080 149726470 -53359062 + MLT2D LTR ERVL 99 520 0 235 55 164 55 chr5 149826586 149826641 -53258891 + AluSc SINE Alu 239 299 0 1718 150 99 0 chr5 149827070 149827343 -53258189 + AluSx SINE Alu 1 300 -12 997 145 21 0 chr5 149827608 149827753 -53257779 - AluJb SINE Alu -18 294 147 2129 105 14 7 chr5 149827985 149828280 -53257252 - AluSq SINE Alu -14 299 3 2128 101 11 7 chr5 149828342 149828628 -53256904 + AluSx SINE Alu 1 287 -25 8072 130 33 18 chr5 149828665 149829984 -53255548 + Tigger1 DNA MER2_type 1 1338 -1080 239 146 21 0 chr5 149829966 149830014 -53255518 + Alu SINE Alu 86 134 -168 * 1637 187 35 0 chr5 149830017 149830306 -53255226 + AluJo SINE Alu 1 299 -13 1864 168 3 13 chr5 149830363 149830672 -53254860 + AluSx SINE Alu 3 308 -4 1608 166 6 62 chr5 149831599 149831797 -53253735 - AluJo SINE Alu -5 307 132 2241 110 0 22 chr5 149831797 149832116 -53253416 + AluSx SINE Alu 1 312 0 1608 166 6 62 chr5 149832116 149832242 -53253290 - AluJo SINE Alu -180 132 1 2121 122 7 10 chr5 149832762 149833065 -53252467 + AluSx SINE Alu 5 306 -6 685 206 0 8 chr5 149833181 149833307 -53252225 - FLAM_C SINE Alu -13 130 6 2244 99 10 7 chr5 149833508 149833811 -53251721 + AluSp SINE Alu 1 304 -9 1406 135 73 99 chr5 149834270 149834625 -53250907 - MER7A DNA MER2_type -1 345 2 272 188 17 145 chr5 149835097 149835170 -53250362 + MIR3 SINE MIR 93 147 -61 2276 97 7 3 chr5 149835170 149835478 -53250054 - AluY SINE Alu -2 309 1 272 188 17 145 chr5 149835478 149835521 -53250011 + MIR3 SINE MIR 147 194 -14 2292 116 0 0 chr5 149836238 149836541 -53248991 + AluSx SINE Alu 1 303 -9 2311 110 7 0 chr5 149836695 149836996 -53248536 + AluSx SINE Alu 10 312 0 1968 106 0 14 chr5 149837651 149837933 -53247599 - AluY SINE Alu -33 278 1 2210 114 10 0 chr5 149838206 149838505 -53247027 + AluSq SINE Alu 1 302 -11 2420 94 3 0 chr5 149844572 149844879 -53240653 - AluSx SINE Alu -4 308 1 687 253 21 50 chr5 149845777 149845962 -53239570 + MIR SINE MIR 29 207 -55 2147 126 0 7 chr5 149845962 149846263 -53239269 + AluSx SINE Alu 1 299 -13 687 253 21 50 chr5 149846263 149846318 -53239214 + MIR SINE MIR 207 262 0 2327 96 20 0 chr5 149846447 149846750 -53238782 + AluSx SINE Alu 1 309 -3 334 294 123 38 chr5 149847483 149847569 -53237963 + L1ME4a LINE L1 5805 5882 -239 2352 100 0 3 chr5 149847569 149847879 -53237653 + AluSg SINE Alu 1 309 -1 334 294 123 38 chr5 149847879 149848084 -53237448 + L1ME4a LINE L1 5882 6121 0 2323 114 0 0 chr5 149848085 149848384 -53237148 + AluSx SINE Alu 1 299 -13 2197 124 0 0 chr5 149848395 149848694 -53236838 + AluSg SINE Alu 1 299 -11 2262 92 0 0 chr5 149848694 149848976 -53236556 + AluSg SINE Alu 27 310 0 281 285 80 7 chr5 149849946 149850083 -53235449 + L3b LINE CR1 1191 1337 -246 289 221 47 35 chr5 149850101 149850166 -53235366 - MIR SINE MIR 0 262 194 2178 117 7 0 chr5 149850166 149850465 -53235067 - AluSq SINE Alu -12 301 1 289 221 47 35 chr5 149850465 149850485 -53235047 - MIR SINE MIR -68 194 176 2186 120 3 10 chr5 149850849 149851158 -53234374 + AluSg SINE Alu 1 307 -3 2014 101 0 69 chr5 149851524 149851860 -53233672 - AluSq SINE Alu 0 315 1 181 0 0 0 chr5 149851869 149851889 -53233643 + (TTTA)n Simple_repeat Simple_repeat 1 80 0 2112 124 0 0 chr5 149851889 149852171 -53233361 - AluSq SINE Alu -1 301 1 1155 111 82 39 chr5 149852174 149852382 -53233150 - L1MD2 LINE L1 -24 6335 6119 1982 161 0 0 chr5 149853367 149853677 -53231855 + AluJb SINE Alu 1 310 -2 397 268 131 0 chr5 149853958 149854126 -53231406 + MIR SINE MIR 73 262 0 1079 64 0 0 chr5 149854177 149854302 -53231230 + AluSq/x SINE Alu 1 125 -188 693 262 84 54 chr5 149854341 149854472 -53231060 - L1ME4a LINE L1 -16 6105 5979 2213 123 0 0 chr5 149854472 149854780 -53230752 - AluSx SINE Alu -4 308 1 1988 151 3 0 chr5 149854783 149855099 -53230433 - AluJb SINE Alu 0 312 1 693 262 84 54 chr5 149855099 149855428 -53230104 - L1ME4a LINE L1 -143 5978 5627 1934 117 38 34 chr5 149855773 149855927 -53229605 - AluSx SINE Alu -20 292 135 2306 105 3 0 chr5 149855927 149856232 -53229300 - AluSg SINE Alu -3 307 2 1934 117 38 34 chr5 149856232 149856368 -53229164 - AluSx SINE Alu -177 135 1 684 297 22 75 chr5 149856380 149856944 -53228588 - L1ME3A LINE L1 -199 5963 5422 672 224 98 39 chr5 149857828 149858217 -53227315 - L1MC5 LINE L1 -51 7910 7499 249 278 0 0 chr5 149858219 149858273 -53227259 + (TATG)n Simple_repeat Simple_repeat 2 55 0 1734 193 0 16 chr5 149858275 149858591 -53226941 - AluJo SINE Alu -1 311 1 2314 206 66 35 chr5 149858660 149859057 -53226475 - MLT1G LTR MaLR -2 588 190 2388 85 0 3 chr5 149859057 149859350 -53226182 - AluSx SINE Alu -20 292 1 2314 206 66 35 chr5 149859350 149859534 -53225998 - MLT1G LTR MaLR -400 190 13 443 286 134 0 chr5 149859630 149859801 -53225731 + MER91A DNA MER1_type 1 194 -2 2360 99 0 0 chr5 149859989 149860291 -53225241 - AluSx SINE Alu -10 302 1 1783 162 30 0 chr5 149860322 149860619 -53224913 - AluJo SINE Alu -6 306 1 1057 159 0 12 chr5 149860967 149861137 -53224395 + FAM SINE Alu 6 173 -12 413 132 0 0 chr5 149861445 149861513 -53224019 - AluSp/q SINE Alu -10 303 236 465 19 0 0 chr5 149861513 149861567 -53223965 + (TA)n Simple_repeat Simple_repeat 2 55 0 324 0 0 0 chr5 149861567 149861603 -53223929 + (T)n Simple_repeat Simple_repeat 1 36 0 2616 136 182 41 chr5 149861633 149862171 -53223361 - LTR18B LTR ERVL 0 614 1 2004 140 37 0 chr5 149862287 149862587 -53222945 + AluJb SINE Alu 1 311 -1 419 310 10 80 chr5 149862789 149862843 -53222689 - MER91A DNA MER1_type -3 193 137 2373 81 0 29 chr5 149862843 149863150 -53222382 + AluSg SINE Alu 1 298 -12 419 310 10 80 chr5 149863150 149863295 -53222237 - MER91A DNA MER1_type -59 137 8 2191 127 0 0 chr5 149865475 149865774 -53219758 - AluY SINE Alu -12 299 1 2511 73 3 0 chr5 149865978 149866279 -53219253 - AluSp SINE Alu -11 302 1 261 245 106 11 chr5 149866795 149866889 -53218643 + MIR SINE MIR 42 144 -64 2140 135 0 0 chr5 149866945 149867242 -53218290 - AluSx SINE Alu -15 297 1 746 160 0 46 chr5 149867246 149867377 -53218155 - FLAM_C SINE Alu -17 126 2 2296 97 3 7 chr5 149868083 149868392 -53217140 + AluSx SINE Alu 1 308 -4 2200 112 0 3 chr5 149868584 149868879 -53216653 - AluSg SINE Alu -16 294 1 890 186 76 13 chr5 149868892 149869129 -53216403 - L1MC5 LINE L1 -71 7890 7639 933 177 6 6 chr5 149869719 149869883 -53215649 - L1PB4 LINE L1 -3 6153 5990 2199 117 0 3 chr5 149869976 149870274 -53215258 + AluSx SINE Alu 1 297 -15 216 305 137 40 chr5 149870537 149870786 -53214746 + L2 LINE L2 2611 2883 -431 492 203 39 52 chr5 149870864 149870895 -53214637 + MIR SINE MIR 2 32 -230 2176 100 14 0 chr5 149870895 149871186 -53214346 + AluSp SINE Alu 1 295 -18 492 203 39 52 chr5 149871186 149871307 -53214225 + MIR SINE MIR 32 152 -110 872 116 0 16 chr5 149871307 149871428 -53214104 + FLAM_C SINE Alu 1 119 -24 333 246 114 9 chr5 149871458 149871572 -53213960 + MIR SINE MIR 136 261 -1 1012 271 82 35 chr5 149872842 149873019 -53212513 - Tigger8 DNA MER2_type -19 647 480 1892 152 0 10 chr5 149873019 149873321 -53212211 - AluJb SINE Alu -13 299 1 1012 271 82 35 chr5 149873321 149873536 -53211996 - Tigger8 DNA MER2_type -186 480 229 2298 104 0 10 chr5 149873536 149873835 -53211697 + AluSc SINE Alu 1 296 -13 1012 271 82 35 chr5 149873835 149873894 -53211638 - Tigger8 DNA MER2_type -437 229 174 2377 94 0 0 chr5 149874311 149874610 -53210922 + AluSq SINE Alu 1 299 -14 1030 188 69 74 chr5 149874762 149874800 -53210732 + L1MC5 LINE L1 7481 7518 -443 1830 140 12 64 chr5 149874800 149875128 -53210404 + AluSx SINE Alu 1 311 -1 1030 188 69 74 chr5 149875128 149875249 -53210283 + L1MC5 LINE L1 7518 7638 -323 2195 112 0 3 chr5 149875249 149875543 -53209989 + AluSx SINE Alu 1 293 -19 1030 188 69 74 chr5 149875543 149875814 -53209718 + L1MC5 LINE L1 7638 7910 -51 879 150 0 0 chr5 149875923 149876106 -53209426 + FLAM_C SINE Alu 1 183 0 841 187 67 0 chr5 149876117 149876267 -53209265 + FRAM SINE Alu 1 156 -20 1423 181 45 7 chr5 149876530 149876818 -53208714 - AluSq SINE Alu -14 299 1 2036 124 17 0 chr5 149877154 149877444 -53208088 - AluSx SINE Alu -17 295 1 1265 253 85 44 chr5 149877682 149878361 -53207171 - L1ME3A LINE L1 -304 5866 5151 830 208 0 6 chr5 149878361 149878520 -53207012 - FRAM SINE Alu -5 161 4 1265 253 85 44 chr5 149878520 149878587 -53206945 - L1ME3A LINE L1 -1019 5151 5088 2363 91 3 7 chr5 149878591 149878898 -53206634 + AluSx SINE Alu 1 306 -6 565 146 21 10 chr5 149878908 149879004 -53206528 + AluSg SINE Alu 2 98 -212 4807 151 24 29 chr5 149879010 149879970 -53205562 - MER11C LTR ERVK -27 1044 1 555 32 0 0 chr5 149879971 149880034 -53205498 - THE1-int LTR MaLR -501 1079 1017 1698 141 0 0 chr5 149880058 149880300 -53205232 + AluSg/x SINE Alu 66 307 -3 689 293 41 32 chr5 149880351 149880692 -53204840 + L1ME2 LINE L1 4703 5046 -1100 602 121 0 0 chr5 149880700 149880783 -53204749 + AluS SINE Alu 2 84 -229 262 189 0 0 chr5 149880788 149880841 -53204691 - L1ME3A LINE L1 -213 5957 5905 2320 116 3 0 chr5 149880854 149881164 -53204368 + AluSp SINE Alu 1 311 -2 617 231 88 23 chr5 149881164 149881380 -53204152 + L1ME3 LINE L1 5933 6162 0 * 2617 221 70 47 chr5 149881379 149882018 -53203514 + L1ME2 LINE L1 5175 5834 -330 1671 179 0 11 chr5 149882018 149882297 -53203235 + AluJb SINE Alu 25 300 -12 2617 221 70 47 chr5 149882297 149882592 -53202940 + L1ME2 LINE L1 5834 6121 -43 1829 253 74 41 chr5 149882598 149883991 -53201541 + L1MEc LINE L1 1615 3091 -3124 1414 164 4 55 chr5 149884758 149885033 -53200499 + AluJo SINE Alu 13 273 -39 3640 193 58 75 chr5 149885149 149885219 -53200313 - L1MEc LINE L1 -2833 3382 3312 2258 77 33 10 chr5 149885219 149885519 -53200013 - AluSp SINE Alu -6 307 1 3640 193 58 75 chr5 149885519 149885723 -53199809 - L1MEc LINE L1 -2903 3312 3106 2243 119 0 6 chr5 149885723 149886035 -53199497 - AluSg SINE Alu 0 310 1 3640 193 58 75 chr5 149886035 149886197 -53199335 - L1MEc LINE L1 -3109 3106 2943 2498 84 3 0 chr5 149886197 149886508 -53199024 - AluSp SINE Alu -1 312 1 3640 193 58 75 chr5 149886508 149886825 -53198707 - L1MEc LINE L1 -3272 2943 2622 1707 146 44 7 chr5 149886825 149887137 -53198395 - AluSx SINE Alu 0 322 1 3640 193 58 75 chr5 149887137 149887151 -53198381 - L1MEc LINE L1 -3593 2622 2609 2367 92 0 3 chr5 149887151 149887445 -53198087 - AluSx SINE Alu -19 293 1 3640 193 58 75 chr5 149887445 149887882 -53197650 - L1MEc LINE L1 -3606 2609 2194 1970 150 13 0 chr5 149887976 149888282 -53197250 - AluSx SINE Alu 0 312 3 312 202 161 42 chr5 149888284 149888452 -53197080 - L1MEc LINE L1 -5370 1026 839 25 0 0 0 chr5 149888462 149888487 -53197045 + AT_rich Low_complexity Low_complexity 1 25 0 1464 179 82 0 chr5 149888487 149888755 -53196777 - AluJb SINE Alu -22 290 1 2363 92 3 0 chr5 149888780 149889074 -53196458 - AluSq SINE Alu -18 295 1 2039 147 0 6 chr5 149889087 149889401 -53196131 - AluSx SINE Alu 0 312 1 227 321 49 62 chr5 149889406 149889543 -53195989 - L1MEc LINE L1 -5576 820 683 2433 86 0 7 chr5 149889543 149889844 -53195688 - AluSg SINE Alu -11 299 1 227 321 49 62 chr5 149889844 149890092 -53195440 - L1MEc LINE L1 -5713 683 440 1294 287 62 5 chr5 149890095 149890530 -53195002 - LTR16B LTR ERVL -2 462 3 1847 322 59 39 chr5 149890570 149891748 -53193784 - ERVL LTR ERVL -37 5408 4266 1977 276 28 4 chr5 149891799 149892295 -53193237 - HERV16 LTR ERVL -3739 1257 750 903 309 69 49 chr5 149892323 149892992 -53192540 - HERV16 LTR ERVL -4312 684 3 1258 280 99 7 chr5 149892994 149893419 -53192113 - LTR16B LTR ERVL 0 464 1 1199 299 19 15 chr5 149893421 149893832 -53191700 - L1MEc LINE L1 -5955 441 29 2482 235 55 53 chr5 149893846 149894291 -53191241 - L1MEc LINE L1 -3000 3215 2772 1655 192 0 20 chr5 149894291 149894588 -53190944 + AluJo SINE Alu 1 291 -21 2296 105 0 3 chr5 149894596 149894890 -53190642 + AluSq SINE Alu 1 293 -20 2482 235 55 53 chr5 149894890 149895246 -53190286 - L1MEc LINE L1 -3449 2766 2412 1906 114 4 0 chr5 149895246 149895500 -53190032 - AluSx SINE Alu -57 255 1 2482 235 55 53 chr5 149895500 149895610 -53189922 - L1MEc LINE L1 -3803 2412 2304 667 203 15 23 chr5 149895610 149895743 -53189789 - FLAM_A SINE Alu 0 133 2 2482 235 55 53 chr5 149895743 149895855 -53189677 - L1MEc LINE L1 -3911 2304 2179 239 272 17 104 chr5 149896026 149896137 -53189395 - L1MEc LINE L1 -4573 1823 1704 1498 156 84 0 chr5 149896137 149896257 -53189275 + AluSq SINE Alu 1 110 -203 225 0 0 0 chr5 149896257 149896282 -53189250 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1498 156 84 0 chr5 149896282 149896411 -53189121 + AluSq SINE Alu 110 271 -42 237 33 0 0 chr5 149896416 149896446 -53189086 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 239 272 17 104 chr5 149896446 149896501 -53189031 - L1MEc LINE L1 -4696 1700 1666 504 167 24 0 chr5 149896513 149896597 -53188935 + AluSp/q SINE Alu 211 296 -17 636 271 104 60 chr5 149896597 149896810 -53188722 - L1MEc LINE L1 -4747 1649 1447 2156 123 13 3 chr5 149896810 149897112 -53188420 - AluSx SINE Alu -7 305 1 636 271 104 60 chr5 149897112 149897235 -53188297 - L1MEc LINE L1 -4949 1447 1289 2208 105 0 0 chr5 149897235 149897551 -53187981 - AluSg SINE Alu 0 321 6 636 271 104 60 chr5 149897551 149897615 -53187917 - L1MEc LINE L1 -5107 1289 1229 215 159 34 45 chr5 149898008 149898096 -53187436 + (TTA)n Simple_repeat Simple_repeat 2 88 0 2127 125 7 0 chr5 149898145 149898434 -53187098 + AluSx SINE Alu 1 291 -21 316 294 91 35 chr5 149898458 149898655 -53186877 - L1M4 LINE L1 -3465 2681 2474 298 270 66 0 chr5 149898700 149898852 -53186680 - L1M4 LINE L1 -3738 2408 2247 752 129 26 0 chr5 149898858 149898974 -53186558 - AluSg/x SINE Alu -24 288 170 892 71 0 0 chr5 149899240 149899352 -53186180 - AluSg/x SINE Alu 0 309 198 2158 114 60 26 chr5 149899899 149900251 -53185281 - THE1B LTR MaLR 0 364 1 3908 90 0 12 chr5 149900251 149900764 -53184768 - THE1B-int LTR MaLR 0 1580 1074 4533 161 31 28 chr5 149900768 149901747 -53183785 - MER11C LTR ERVK -4 1067 1 7015 74 24 23 chr5 149901748 149902449 -53183083 - THE1B-int LTR MaLR -501 1079 372 2168 124 10 0 chr5 149902449 149902755 -53182777 + AluSc SINE Alu 1 309 0 7015 74 24 23 chr5 149902755 149903128 -53182404 - THE1B-int LTR MaLR -1208 372 1 2199 107 59 34 chr5 149903128 149903483 -53182049 - THE1B LTR MaLR 0 364 1 232 353 161 22 chr5 149903511 149903922 -53181610 - L2 LINE L2 -1001 2313 1846 438 216 123 56 chr5 149904281 149904443 -53181089 + MER69A DNA AcHobo 1 173 -4 2347 100 3 0 chr5 149904502 149904801 -53180731 - AluSp SINE Alu -13 300 1 314 307 102 6 chr5 149905342 149905508 -53180024 - MIR SINE MIR -62 200 19 1393 192 0 0 chr5 149905570 149905799 -53179733 + AluJo SINE Alu 84 312 0 342 243 37 65 chr5 149906572 149906679 -53178853 - L2 LINE L2 0 3313 3210 2309 105 0 3 chr5 149906679 149906984 -53178548 + AluSc SINE Alu 1 304 -5 2157 215 44 171 chr5 149906997 149907303 -53178229 - L2 LINE L2 -299 3014 2671 912 135 0 15 chr5 149907303 149907436 -53178096 - FLAM_C SINE Alu -6 137 7 2157 215 44 171 chr5 149907436 149908010 -53177522 - L2 LINE L2 -642 2671 2132 2266 100 3 13 chr5 149908094 149908393 -53177139 + AluSx SINE Alu 1 296 -16 244 216 103 21 chr5 149908422 149908519 -53177013 + L1MEc LINE L1 50 154 -6242 * 6036 205 45 75 chr5 149908518 149909604 -53175928 + L1M4 LINE L1 2411 3528 -2618 2429 91 3 0 chr5 149909604 149909911 -53175621 - AluSp SINE Alu -5 308 1 6036 205 45 75 chr5 149909911 149910132 -53175400 + L1M4 LINE L1 3528 3754 -2392 1653 173 0 15 chr5 149910132 149910403 -53175129 + AluJo SINE Alu 28 294 -18 6036 205 45 75 chr5 149910403 149910419 -53175113 + L1M4 LINE L1 3754 3769 -2377 1567 199 20 17 chr5 149910419 149910721 -53174811 + AluJo SINE Alu 1 303 -9 6036 205 45 75 chr5 149910721 149911593 -53173939 + L1M4 LINE L1 3769 4540 -1606 2125 134 3 10 chr5 149911593 149911906 -53173626 - AluSx SINE Alu -1 311 1 6036 205 45 75 chr5 149911906 149911997 -53173535 + L1M4 LINE L1 4540 4632 -1514 2369 89 0 3 chr5 149912484 149912786 -53172746 - AluY SINE Alu -10 301 1 2334 163 5 14 chr5 149912836 149913254 -53172278 - LTR51 LTR ERV1 0 671 258 708 179 0 0 chr5 149913260 149913372 -53172160 + FLAM_C SINE Alu 6 117 -26 408 40 0 0 chr5 149913372 149913422 -53172110 + (CA)n Simple_repeat Simple_repeat 2 51 0 1235 115 50 107 chr5 149913426 149913534 -53171998 - LTR51 LTR ERV1 -425 246 133 2254 104 3 3 chr5 149913534 149913843 -53171689 - AluSx SINE Alu -2 310 2 1235 115 50 107 chr5 149913843 149913995 -53171537 - LTR51 LTR ERV1 -538 133 1 33 43 0 0 chr5 149914024 149914071 -53171461 + AT_rich Low_complexity Low_complexity 1 47 0 2507 77 3 0 chr5 149914163 149914473 -53171059 - AluSp SINE Alu -2 311 1 495 0 0 0 chr5 149914483 149914538 -53170994 + (TG)n Simple_repeat Simple_repeat 2 56 0 2096 126 0 3 chr5 149914538 149914824 -53170708 - AluSx SINE Alu -27 285 1 1778 95 8 4 chr5 149915483 149915724 -53169808 - AluSg SINE Alu -30 280 39 28 102 0 0 chr5 149915978 149916076 -53169456 + AT_rich Low_complexity Low_complexity 1 98 0 2186 80 0 21 chr5 149916085 149916411 -53169121 + AluY SINE Alu 1 320 0 234 0 0 0 chr5 149917384 149917410 -53168122 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 2139 96 53 0 chr5 149917581 149917862 -53167670 - AluSx SINE Alu -16 296 1 1933 125 3 24 chr5 149918047 149918359 -53167173 + AluSx SINE Alu 1 306 0 21 36 0 0 chr5 149918396 149918424 -53167108 + AT_rich Low_complexity Low_complexity 1 28 0 1789 148 18 4 chr5 149918424 149918702 -53166830 - AluJo SINE Alu -17 295 14 198 0 0 0 chr5 149919299 149919321 -53166211 + (TAA)n Simple_repeat Simple_repeat 2 23 0 180 0 0 0 chr5 149919321 149919341 -53166191 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1538 207 0 0 chr5 149919343 149919594 -53165938 - AluJo SINE Alu -61 251 1 1433 190 29 21 chr5 149919594 149919900 -53165632 - AluJo SINE Alu 0 308 1 333 220 40 20 chr5 149920163 149920263 -53165269 - L1ME LINE L1 -317 5804 5703 2032 145 0 6 chr5 149920699 149921010 -53164522 + AluJo SINE Alu 1 309 -3 2149 131 7 0 chr5 149921237 149921542 -53163990 - AluSx SINE Alu -5 307 1 2088 111 14 7 chr5 149923574 149923871 -53161661 - AluSp SINE Alu -14 299 1 1864 166 3 0 chr5 149924329 149924619 -53160913 - AluJb SINE Alu -21 291 1 181 0 33 33 chr5 149924652 149924682 -53160850 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2250 82 0 17 chr5 149924686 149924978 -53160554 - AluY SINE Alu -24 287 1 2032 139 7 3 chr5 149924980 149925275 -53160257 - AluSx SINE Alu -16 296 1 244 305 19 29 chr5 149925595 149925700 -53159832 - L2 LINE L2 -34 3279 3176 2206 108 0 7 chr5 149925710 149926005 -53159527 + AluSx SINE Alu 1 293 -19 2094 93 3 51 chr5 149926423 149926735 -53158797 + AluSx SINE Alu 3 299 -13 558 297 55 6 chr5 149927329 149927494 -53158038 + MIR3 SINE MIR 8 180 -28 1359 163 151 0 chr5 149927716 149927967 -53157565 + AluJb SINE Alu 1 289 -13 2329 75 3 0 chr5 149927976 149928269 -53157263 + AluY SINE Alu 1 294 -17 21 0 0 0 chr5 149928269 149928290 -53157242 + AT_rich Low_complexity Low_complexity 1 21 0 1920 145 0 10 chr5 149928537 149928834 -53156698 - AluJo SINE Alu -14 298 5 186 188 188 43 chr5 149928865 149928934 -53156598 + L2 LINE L2 3231 3309 -4 687 172 33 8 chr5 149929840 149929962 -53155570 - FLAM_C SINE Alu -18 125 1 1030 161 0 0 chr5 149929970 149930125 -53155407 - FRAM SINE Alu -23 153 1 740 242 102 0 chr5 149930127 149930313 -53155219 - MIR SINE MIR -10 252 48 516 164 0 62 chr5 149930384 149930512 -53155020 + L1MB1 LINE L1 6049 6168 0 1938 105 7 43 chr5 149930598 149930925 -53154607 + AluSp SINE Alu 1 313 0 2377 214 19 36 chr5 149931093 149931612 -53153920 + L1ME1 LINE L1 5540 6048 -118 201 39 0 0 chr5 149931612 149931638 -53153894 + (TG)n Simple_repeat Simple_repeat 2 27 0 2377 214 19 36 chr5 149931638 149931750 -53153782 + L1ME1 LINE L1 6048 6160 -6 316 331 101 0 chr5 149931793 149931941 -53153591 + L1MC4a LINE L1 4725 4887 -1259 1627 178 13 20 chr5 149932078 149932376 -53153156 - AluJo SINE Alu -16 296 1 632 125 0 0 chr5 149932475 149932563 -53152969 + FLAM_A SINE Alu 28 115 -27 24 0 0 29 chr5 149932695 149932706 -53152826 + AT_rich Low_complexity Low_complexity 1 11 -23 1968 114 0 59 chr5 149932706 149933012 -53152520 - AluJb SINE Alu -24 288 1 24 0 0 29 chr5 149933012 149933035 -53152497 + AT_rich Low_complexity Low_complexity 11 34 0 640 241 7 7 chr5 149933037 149933174 -53152358 + FRAM SINE Alu 2 138 -38 24 0 0 0 chr5 149933176 149933200 -53152332 + AT_rich Low_complexity Low_complexity 1 24 0 1437 201 66 3 chr5 149933208 149933496 -53152036 + AluJb SINE Alu 6 311 -1 2359 93 3 0 chr5 149933496 149933806 -53151726 + AluSp SINE Alu 1 311 -2 43 0 0 0 chr5 149933806 149933849 -53151683 + AT_rich Low_complexity Low_complexity 1 43 0 2212 118 0 10 chr5 149934045 149934349 -53151183 - AluSx SINE Alu -11 301 1 21 36 0 0 chr5 149934983 149935011 -53150521 + AT_rich Low_complexity Low_complexity 1 28 0 2221 92 24 3 chr5 149935058 149935351 -53150181 - AluSg SINE Alu -11 299 1 997 267 22 52 chr5 149935409 149935739 -53149793 + L1MC4a LINE L1 5494 5811 -1997 2316 95 10 0 chr5 149935739 149936034 -53149498 + AluSp SINE Alu 1 298 -15 997 267 22 52 chr5 149936034 149936108 -53149424 + L1MC4a LINE L1 5811 5886 -1922 * 5653 166 44 14 chr5 149936106 149936250 -53149282 + L1MC2 LINE L1 4467 4605 -1739 550 147 8 31 chr5 149936250 149936379 -53149153 + L1MA8 LINE L1 6156 6281 -10 5653 166 44 14 chr5 149936379 149938046 -53147486 + L1MC2 LINE L1 4605 6327 -17 947 200 11 0 chr5 149938052 149938232 -53147300 + AluJb SINE Alu 117 298 -14 598 259 38 5 chr5 149938536 149938748 -53146784 - L1ME LINE L1 -557 5613 5395 2086 69 10 41 chr5 149938786 149939105 -53146427 - AluY SINE Alu 0 315 6 953 71 0 0 chr5 149939684 149939797 -53145735 - AluSp/q SINE Alu -19 294 182 534 103 0 0 chr5 149939835 149939913 -53145619 + (TA)n Simple_repeat Simple_repeat 1 78 0 4207 256 67 38 chr5 149939936 149942104 -53143428 + L1MB8 LINE L1 121 2363 -4596 1699 178 11 0 chr5 149942104 149942374 -53143158 + AluJo SINE Alu 1 273 -39 5169 108 19 41 chr5 149942475 149942768 -53142764 - HSMAR2 DNA Mariner -135 1167 869 1983 165 0 0 chr5 149942768 149943071 -53142461 + AluJb SINE Alu 1 303 -9 5169 108 19 41 chr5 149943071 149943631 -53141901 - HSMAR2 DNA Mariner -433 869 333 35025 91 11 16 chr5 149943643 149949820 -53135712 - L1PA6 LINE L1 -1 6153 11 553 124 0 11 chr5 149949828 149949917 -53135615 - HSMAR2 DNA Mariner -951 351 264 632 184 0 0 chr5 149949917 149950020 -53135512 + FLAM_C SINE Alu 18 120 -23 22 0 0 0 chr5 149950025 149950047 -53135485 + AT_rich Low_complexity Low_complexity 1 22 0 1932 76 7 0 chr5 149950059 149950334 -53135198 - HSMAR2 DNA Mariner -1024 278 2 263 47 0 70 chr5 149950346 149950389 -53135143 + HERVL LTR ERVL 2222 2261 -3393 335 221 116 91 chr5 149950543 149950742 -53134790 + L1MB8 LINE L1 2615 2818 -4139 1946 140 0 20 chr5 149950742 149951034 -53134498 + AluSx SINE Alu 1 286 -26 844 223 21 75 chr5 149951065 149951206 -53134326 + L1MB8 LINE L1 2853 3000 -3957 2017 133 3 29 chr5 149951206 149951522 -53134010 + AluSx SINE Alu 1 308 -4 844 223 21 75 chr5 149951522 149951836 -53133696 + L1MB8 LINE L1 3000 3257 -3700 10884 201 38 25 chr5 149951861 149952202 -53133330 + L1MB8 LINE L1 3408 3743 -3252 1794 181 0 13 chr5 149952202 149952511 -53133021 + AluJb SINE Alu 1 305 -7 10884 201 38 25 chr5 149952511 149953827 -53131705 + L1MB8 LINE L1 3743 5041 -1954 3436 160 17 57 chr5 149953827 149954464 -53131068 + LTR9 LTR ERV1 1 612 0 10884 201 38 25 chr5 149954464 149954651 -53130881 + L1MB8 LINE L1 5041 5224 -1771 2618 61 0 6 chr5 149954651 149954964 -53130568 + AluY SINE Alu 1 311 0 10884 201 38 25 chr5 149954964 149955257 -53130275 + L1MB8 LINE L1 5224 5512 -1483 1826 178 7 0 chr5 149955257 149955560 -53129972 + AluJb SINE Alu 1 305 -7 10884 201 38 25 chr5 149955560 149955631 -53129901 + L1MB8 LINE L1 5512 5581 -1414 5622 79 3 14 chr5 149955631 149956330 -53129202 + LTR8 LTR ERV1 1 691 0 10884 201 38 25 chr5 149956330 149956978 -53128554 + L1MB8 LINE L1 5581 6298 -697 831 176 15 0 chr5 149956982 149957113 -53128419 + AluJo SINE Alu 7 139 -173 2291 88 3 13 chr5 149957116 149957422 -53128110 + AluSg SINE Alu 1 303 -7 677 210 79 28 chr5 149957422 149957636 -53127896 + L1MB8 LINE L1 6759 6983 -6 444 189 8 76 chr5 149957653 149957785 -53127747 + L1MC5 LINE L1 6753 6875 -1086 2152 94 6 9 chr5 149957798 149958196 -53127336 - LTR7 LTR ERV1 -2 448 1 2860 162 169 17 chr5 149958235 149958834 -53126698 + MER39 LTR ERV1 1 690 -17 2355 78 3 0 chr5 149958835 149959130 -53126402 - AluSp SINE Alu -17 296 1 710 180 92 76 chr5 149959157 149959407 -53126125 + L1MC5 LINE L1 6910 7163 -798 672 130 15 53 chr5 149959410 149959541 -53125991 + L1MD3 LINE L1 7870 7995 0 2019 180 11 8 chr5 149959550 149959923 -53125609 + L1MB8 LINE L1 6270 6643 -352 816 139 82 0 chr5 149959923 149960045 -53125487 + AluSp SINE Alu 2 133 -180 1640 170 91 20 chr5 149960048 149960389 -53125143 + L1MB8 LINE L1 6622 6986 -3 809 128 15 45 chr5 149960441 149960574 -53124958 + FLAM_C SINE Alu 2 130 -13 279 259 9 69 chr5 149960588 149960704 -53124828 + L1ME3A LINE L1 5962 6070 -100 531 183 0 0 chr5 149961170 149961263 -53124269 - MIR SINE MIR -60 202 110 949 246 12 32 chr5 149961309 149961557 -53123975 + MIR SINE MIR 20 262 0 602 117 0 0 chr5 149961720 149961797 -53123735 - AluSc SINE Alu -107 202 126 2228 127 0 0 chr5 149962240 149962540 -53122992 + AluSx SINE Alu 1 300 -12 945 143 0 0 chr5 149963032 149963212 -53122320 + FLAM_C SINE Alu 1 180 0 323 336 136 12 chr5 149963229 149963559 -53121973 + L2 LINE L2 1709 2079 -1235 282 233 68 0 chr5 149963661 149963734 -53121798 + L2 LINE L2 2002 2079 -1235 1336 142 15 160 chr5 149963757 149964094 -53121438 - AluJo SINE Alu -24 288 1 3189 108 68 6 chr5 149964118 149964636 -53120896 - L1MA8 LINE L1 -6 6285 5736 2281 114 0 0 chr5 149964636 149964934 -53120598 - AluSx SINE Alu -13 299 2 844 170 0 15 chr5 149964948 149965083 -53120449 - FLAM_C SINE Alu 0 133 1 1863 159 31 3 chr5 149965083 149965434 -53120098 - L1MA8 LINE L1 -815 5331 4971 489 309 189 47 chr5 149965434 149965888 -53119644 + L2 LINE L2 2188 2743 -571 2450 63 0 26 chr5 149965888 149966191 -53119341 - AluSc SINE Alu -14 295 1 489 309 189 47 chr5 149966191 149966313 -53119219 + L2 LINE L2 2743 2846 -468 463 320 188 23 chr5 149966343 149966652 -53118880 + L2 LINE L2 2909 3268 -4 360 200 13 13 chr5 149966895 149966970 -53118562 - L2 LINE L2 -16 3297 3223 2471 68 0 0 chr5 149967000 149967292 -53118240 + AluSc SINE Alu 1 292 -17 1631 151 95 18 chr5 149967306 149967590 -53117942 + AluSx SINE Alu 1 306 -6 345 362 69 32 chr5 149967590 149967836 -53117696 - L2 LINE L2 -85 3187 2933 189 223 136 117 chr5 149968169 149968245 -53117287 + MIR3 SINE MIR 2 82 -126 3769 142 10 0 chr5 149968245 149968766 -53116766 - MER1A DNA MER1_type 0 527 2 189 223 136 117 chr5 149968766 149968792 -53116740 + MIR3 SINE MIR 82 106 -102 2003 129 3 32 chr5 149968836 149969146 -53116386 + AluSx SINE Alu 11 311 -1 2151 91 18 0 chr5 149969497 149969806 -53115726 + AluSg SINE Alu 1 314 0 1237 101 0 6 chr5 149969806 149969974 -53115558 + AluSg/x SINE Alu 123 289 -21 234 345 25 56 chr5 149969977 149970174 -53115358 + L2 LINE L2 2453 2643 -671 1180 153 0 0 chr5 149970266 149970442 -53115090 + FRAM SINE Alu 1 176 0 261 83 0 0 chr5 149970849 149970885 -53114647 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 260 51 0 26 chr5 149970926 149970965 -53114567 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 1500 188 18 32 chr5 149970965 149971247 -53114285 - AluJo SINE Alu -34 278 1 255 274 14 0 chr5 149971253 149971326 -53114206 - MIR SINE MIR -9 253 180 1484 141 40 77 chr5 149971339 149971637 -53113895 + AluSq SINE Alu 2 288 -25 1966 153 3 0 chr5 149972538 149972838 -53112694 - AluSx SINE Alu -11 301 1 21 0 0 0 chr5 149973136 149973157 -53112375 + AT_rich Low_complexity Low_complexity 1 21 0 826 176 8 0 chr5 149973587 149973718 -53111814 - FLAM_C SINE Alu 0 133 2 2079 126 0 0 chr5 149973955 149974240 -53111292 + AluSq SINE Alu 1 285 -28 2202 100 7 0 chr5 149974572 149974861 -53110671 + AluSp SINE Alu 1 291 -22 2072 126 10 13 chr5 149974981 149975291 -53110241 + AluSx SINE Alu 2 310 -2 1131 112 0 0 chr5 149975630 149975791 -53109741 - AluSg/x SINE Alu -15 297 137 2343 89 3 3 chr5 149975791 149976093 -53109439 - AluSx SINE Alu -9 303 2 856 212 0 11 chr5 149976137 149976321 -53109211 + FRAM SINE Alu 1 176 0 24 32 0 0 chr5 149976497 149976528 -53109004 + AT_rich Low_complexity Low_complexity 1 31 0 2135 118 0 3 chr5 149976853 149977142 -53108390 - AluSx SINE Alu -20 292 5 2184 97 0 36 chr5 149977142 149977307 -53108225 - AluSx SINE Alu -14 298 148 2362 66 20 3 chr5 149977307 149977610 -53107922 - AluY SINE Alu -3 308 1 2184 97 0 36 chr5 149977610 149977753 -53107779 - AluSx SINE Alu -164 148 1 332 361 100 32 chr5 149978159 149978439 -53107093 + L2 LINE L2 2942 3240 -32 2348 69 10 7 chr5 149979702 149980006 -53105526 - AluSx SINE Alu -7 305 1 314 254 46 92 chr5 149980413 149980586 -53104946 + MER5B DNA MER1_type 3 167 -11 2523 56 0 3 chr5 149980672 149980977 -53104555 + AluY SINE Alu 4 307 -4 226 308 103 37 chr5 149981068 149981094 -53104438 - L2 LINE L2 -33 3239 3216 1708 148 65 0 chr5 149981094 149981372 -53104160 + AluJb SINE Alu 1 296 -16 226 308 103 37 chr5 149981372 149981452 -53104080 - L2 LINE L2 -56 3216 3126 1207 145 226 0 chr5 149981937 149982172 -53103360 - AluJo SINE Alu -24 288 1 288 0 0 0 chr5 149983804 149983836 -53101696 + (CGG)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 149983849 149983885 -53101647 + GC_rich Low_complexity Low_complexity 1 36 0 5636 36 0 14 chr5 149985806 149986452 -53099080 - L1PA5 LINE L1 0 6154 5518 365 154 39 26 chr5 149986957 149987035 -53098497 + AluJo SINE Alu 30 108 -194 1316 159 5 23 chr5 149987075 149987295 -53098237 + AluJo SINE Alu 85 300 -12 1852 31 9 18 chr5 149987927 149988156 -53097376 + AluY SINE Alu 83 309 -2 2251 96 40 3 chr5 149988380 149988681 -53096851 + AluSq SINE Alu 1 312 -1 396 59 0 0 chr5 149988681 149988732 -53096800 + (TA)n Simple_repeat Simple_repeat 2 52 0 314 270 162 7 chr5 149989697 149989845 -53095687 + L1MC/D LINE L1 5672 5842 -1966 1651 191 117 93 chr5 149990026 149990268 -53095264 + Charlie1a DNA MER1_type 1 236 -2525 1350 147 117 26 chr5 149990268 149990534 -53094998 + AluJb SINE Alu 1 290 -22 1651 191 117 93 chr5 149990534 149990616 -53094916 + Charlie1a DNA MER1_type 236 315 -2446 1928 113 62 7 chr5 149990616 149990908 -53094624 - AluSx SINE Alu -4 308 1 1651 191 117 93 chr5 149990908 149991131 -53094401 + Charlie1a DNA MER1_type 315 562 -893 1247 118 0 0 chr5 149991134 149991303 -53094229 + AluSg/x SINE Alu 130 298 -12 2303 174 46 50 chr5 149991373 149991721 -53093811 + Charlie1a DNA MER1_type 681 1028 -1733 2243 120 7 0 chr5 149991721 149992029 -53093503 + AluSx SINE Alu 2 311 -1 2303 174 46 50 chr5 149992029 149992220 -53093312 + Charlie1a DNA MER1_type 1028 1218 -237 22 0 0 0 chr5 149992226 149992248 -53093284 + AT_rich Low_complexity Low_complexity 1 22 0 2025 125 17 0 chr5 149992278 149992567 -53092965 - AluSq SINE Alu -19 294 1 537 204 0 0 chr5 149992602 149992695 -53092837 - AluSg/x SINE Alu -15 297 205 284 296 89 7 chr5 149992782 149992917 -53092615 - L1ME LINE L1 -500 5621 5476 2491 39 0 0 chr5 149993312 149993593 -53091939 - AluY SINE Alu -1 310 30 1395 208 0 51 chr5 149993604 149993916 -53091616 - AluJo SINE Alu -4 308 13 2117 136 0 0 chr5 149994018 149994312 -53091220 + AluSx SINE Alu 1 294 -18 628 195 124 0 chr5 149994324 149994437 -53091095 + FLAM_A SINE Alu 1 127 -6 1844 167 0 3 chr5 149994527 149994814 -53090718 + AluJo SINE Alu 1 286 -26 1944 160 0 3 chr5 149994854 149995147 -53090385 + AluJb SINE Alu 8 299 -13 311 223 152 33 chr5 149995184 149995241 -53090291 - L1ME4a LINE L1 -225 5896 5847 2325 97 0 0 chr5 149995241 149995531 -53090001 + AluSc SINE Alu 1 290 -19 311 223 152 33 chr5 149995531 149995657 -53089875 - L1ME4a LINE L1 -274 5847 5691 887 201 0 6 chr5 149995671 149995830 -53089702 - AluSc SINE Alu -17 292 135 2076 87 80 0 chr5 149995830 149996116 -53089416 - AluSx SINE Alu -3 309 1 1583 191 85 55 chr5 149997040 149997511 -53088021 - L1MB8 LINE L1 0 6178 5694 241 335 142 5 chr5 149997557 149997769 -53087763 - L2 LINE L2 -961 2353 2113 2333 100 0 3 chr5 149998088 149998389 -53087143 + AluSg SINE Alu 1 300 -10 2288 101 0 3 chr5 149998405 149998703 -53086829 + AluSx SINE Alu 5 301 -11 2372 94 0 7 chr5 149998704 149999012 -53086520 + AluSq SINE Alu 1 306 -7 490 285 99 45 chr5 149999013 149999308 -53086224 - L1ME4a LINE L1 -82 6039 5713 2359 108 0 0 chr5 149999308 149999614 -53085918 - AluSg SINE Alu -4 306 1 490 285 99 45 chr5 149999614 149999742 -53085790 - L1ME4a LINE L1 -408 5713 5593 1240 199 142 60 chr5 149999831 150000143 -53085389 - MSTD LTR MaLR 0 396 48 2045 127 9 19 chr5 150000143 150000458 -53085074 - AluSx SINE Alu 0 312 1 1240 199 142 60 chr5 150000458 150000511 -53085021 - MSTD LTR MaLR -348 48 1 186 231 0 0 chr5 150000834 150000873 -53084659 - MIR SINE MIR -120 88 50 2119 127 10 0 chr5 150001303 150001603 -53083929 - AluY SINE Alu -8 303 1 2343 87 10 3 chr5 150001891 150002202 -53083330 - AluSp SINE Alu 0 313 1 1080 192 9 5 chr5 150002117 150002204 -53083328 - AluJo SINE Alu -92 220 2 895 145 0 15 chr5 150002204 150002335 -53083197 - AluJo/FLAM SINE Alu -172 130 2 1555 186 3 14 chr5 150004036 150004332 -53081200 + AluJb SINE Alu 1 293 -19 458 251 180 16 chr5 150005034 150005100 -53080432 - MIR SINE MIR -27 235 181 2191 82 0 7 chr5 150005100 150005391 -53080141 + AluSq SINE Alu 10 298 -15 458 251 180 16 chr5 150005391 150005507 -53080025 - MIR SINE MIR -81 181 23 1692 163 14 7 chr5 150005626 150005921 -53079611 - AluJb SINE Alu -15 297 1 2147 74 7 0 chr5 150007524 150007809 -53077723 + AluSx SINE Alu 1 287 -25 1343 184 26 11 chr5 150008790 150009062 -53076470 - AluJo SINE Alu -36 276 1 2025 107 0 10 chr5 150009280 150009579 -53075953 + AluSq SINE Alu 5 300 -13 260 266 150 0 chr5 150010095 150010208 -53075324 - MIR SINE MIR -20 242 113 1388 154 49 31 chr5 150010695 150010981 -53074551 - AluJb SINE Alu -21 291 1 872 203 0 28 chr5 150011247 150011424 -53074108 + FAM SINE Alu 1 49 0 259 77 0 0 chr5 150011487 150011526 -53074006 - L1MC4 LINE L1 -1339 6703 6665 2171 94 0 16 chr5 150012110 150012417 -53073115 + AluSc SINE Alu 1 302 -7 772 199 64 13 chr5 150012783 150012939 -53072593 + FRAM SINE Alu 1 164 -2 2477 68 3 0 chr5 150013133 150013444 -53072088 - AluSp SINE Alu -1 312 1 21 0 0 0 chr5 150013446 150013467 -53072065 + AT_rich Low_complexity Low_complexity 1 21 0 1970 120 0 0 chr5 150013472 150013746 -53071786 - AluSg SINE Alu -36 274 1 218 220 68 17 chr5 150013747 150013806 -53071726 + L2 LINE L2 3172 3233 -39 2077 123 0 19 chr5 150014442 150014758 -53070774 - AluSq SINE Alu -3 310 1 424 122 0 0 chr5 150014807 150014881 -53070651 + Alu SINE Alu 235 308 -4 535 193 0 35 chr5 150014892 150015006 -53070526 + FRAM SINE Alu 65 174 -2 2146 101 0 3 chr5 150015983 150016279 -53069253 - AluSg SINE Alu -15 295 1 1735 150 3 23 chr5 150016682 150016982 -53068550 - AluJb SINE Alu -18 294 1 21 0 0 0 chr5 150016983 150017004 -53068528 + AT_rich Low_complexity Low_complexity 1 21 0 1887 146 13 3 chr5 150017139 150017440 -53068092 - AluSx SINE Alu -8 304 1 2492 43 0 0 chr5 150017458 150017759 -53067773 - AluY SINE Alu -10 301 1 2335 97 0 0 chr5 150017761 150018069 -53067463 - AluSg SINE Alu -2 308 1 1251 163 124 4 chr5 150018976 150019234 -53066298 + AluJb SINE Alu 3 291 -21 432 0 0 0 chr5 150019611 150019659 -53065873 + (CA)n Simple_repeat Simple_repeat 2 49 0 1989 111 24 3 chr5 150019853 150020150 -53065382 + AluSq SINE Alu 2 304 -9 1865 145 17 0 chr5 150020214 150020511 -53065021 + AluSx SINE Alu 1 302 -10 2169 62 0 46 chr5 150020750 150021078 -53064454 + AluY SINE Alu 3 311 0 2055 76 40 0 chr5 150022508 150022783 -53062749 - AluSx SINE Alu -26 286 1 23 0 0 0 chr5 150022915 150022938 -53062594 + AT_rich Low_complexity Low_complexity 1 23 0 276 250 125 23 chr5 150023494 150023582 -53061950 + MIR SINE MIR 51 147 -115 221 203 62 16 chr5 150023749 150023813 -53061719 - MIR SINE MIR -107 155 89 275 322 114 30 chr5 150024697 150025178 -53060354 - L2 LINE L2 -40 3273 2694 809 136 0 0 chr5 150025240 150025358 -53060174 - AluJb SINE Alu -194 118 1 1233 216 119 37 chr5 150025498 150025900 -53059632 + LTR48B LTR ERV1 1 435 -209 617 96 64 48 chr5 150025910 150025958 -53059574 + LTR49 LTR ERV1 459 505 -90 2051 125 3 0 chr5 150025958 150026262 -53059270 - AluSq SINE Alu -8 305 1 617 96 64 48 chr5 150026262 150026338 -53059194 + LTR49 LTR ERV1 505 585 -10 2256 78 3 0 chr5 150026927 150027220 -53058312 + AluY SINE Alu 1 294 -17 1669 184 3 3 chr5 150027538 150027837 -53057695 - AluJb SINE Alu -13 299 1 2084 99 10 7 chr5 150027913 150028205 -53057327 + AluSx SINE Alu 1 293 -19 1088 174 5 10 chr5 150028219 150028426 -53057106 + AluJo SINE Alu 97 302 -10 2065 109 0 3 chr5 150028512 150028805 -53056727 - AluSx SINE Alu -20 292 1 1425 183 33 31 chr5 150028806 150029140 -53056392 - L1MC/D LINE L1 -575 5674 5335 2187 88 0 58 chr5 150029151 150029480 -53056052 + AluY SINE Alu 1 310 -1 242 83 0 42 chr5 150029611 150029659 -53055873 - L1MC1 LINE L1 -3 6330 6285 1580 128 4 0 chr5 150029669 150029903 -53055629 + AluJo SINE Alu 2 236 -76 1475 246 30 25 chr5 150029908 150030302 -53055230 - LTR40a LTR ERVL -4 515 120 1001 165 16 11 chr5 150030302 150030484 -53055048 - L1MC/D LINE L1 -1199 5016 4834 2037 99 0 3 chr5 150030489 150030796 -53054736 - AluSq SINE Alu 0 306 1 1816 142 0 30 chr5 150030798 150031094 -53054438 - AluSx SINE Alu -19 293 7 450 243 89 0 chr5 150031146 150031284 -53054248 - MER58 DNA MER1_type -55 2365 4 1179 204 50 4 chr5 150031284 150031544 -53053988 - L1MC/D LINE L1 -1388 4827 4556 614 229 114 23 chr5 150031692 150031808 -53053724 + AluJo SINE Alu 2 141 -171 2081 115 7 7 chr5 150031808 150031942 -53053590 + AluSx SINE Alu 1 134 -178 2069 114 0 3 chr5 150031942 150032241 -53053291 + AluSx SINE Alu 11 308 -4 2081 115 7 7 chr5 150032241 150032411 -53053121 + AluSx SINE Alu 133 305 -7 614 229 114 23 chr5 150032411 150032469 -53053063 + AluJo SINE Alu 141 192 -120 313 257 0 0 chr5 150032502 150032572 -53052960 - L1MC/D LINE L1 -4693 1703 1634 1210 219 83 6 chr5 150032573 150032998 -53052534 - MLT1F1 LTR MaLR 0 542 54 1305 166 29 73 chr5 150032998 150033179 -53052353 - AluJo SINE Alu -3 309 121 2033 115 14 0 chr5 150033179 150033465 -53052067 + AluSc SINE Alu 1 290 -19 1305 166 29 73 chr5 150033465 150033480 -53052052 - AluJo SINE Alu -191 121 107 2948 51 11 0 chr5 150033480 150033831 -53051701 - THE1A LTR MaLR 0 355 1 1305 166 29 73 chr5 150033831 150033947 -53051585 - AluJo SINE Alu -205 107 10 2227 77 37 0 chr5 150033956 150034263 -53051269 - AluY SINE Alu 0 318 1 185 208 0 19 chr5 150034431 150034484 -53051048 + CT-rich Low_complexity Low_complexity 1 52 0 994 182 6 0 chr5 150034566 150034742 -53050790 + FRAM SINE Alu 1 175 -1 272 293 77 22 chr5 150034768 150035041 -53050491 - L1M4 LINE L1 -2201 3945 3658 296 278 41 0 chr5 150035041 150035138 -53050394 + LTR48B LTR ERV1 1 101 -543 182 104 0 62 chr5 150035733 150035781 -53049751 + (A)n Simple_repeat Simple_repeat 1 45 0 805 178 53 105 chr5 150035782 150035960 -53049572 + MER39 LTR ERV1 296 459 -248 1718 146 17 0 chr5 150035960 150036248 -53049284 - AluJo SINE Alu -19 293 1 805 178 53 105 chr5 150036248 150036316 -53049216 + MER39 LTR ERV1 459 529 -178 1427 154 0 24 chr5 150036316 150036589 -53048943 + AluSx SINE Alu 48 314 0 388 154 66 22 chr5 150036589 150036680 -53048852 + MER39 LTR ERV1 517 611 -96 1568 101 0 51 chr5 150036681 150036817 -53048715 + AluSq SINE Alu 1 121 -192 2197 81 7 19 chr5 150036817 150037126 -53048406 + AluY SINE Alu 1 305 -6 1568 101 0 51 chr5 150037126 150037226 -53048306 + AluSq SINE Alu 121 225 -88 206 118 0 0 chr5 150037243 150037277 -53048255 + (A)n Simple_repeat Simple_repeat 1 34 0 976 203 14 14 chr5 150037280 150037487 -53048045 + LTR29 LTR ERV1 160 366 -256 712 130 59 71 chr5 150037640 150037809 -53047723 + LTR48B LTR ERV1 475 641 -3 1857 111 34 20 chr5 150037838 150038135 -53047397 - AluSg SINE Alu -9 301 1 198 0 0 0 chr5 150038135 150038157 -53047375 + (T)n Simple_repeat Simple_repeat 1 22 0 1402 155 9 13 chr5 150038184 150038416 -53047116 - AluJo SINE Alu -81 231 1 2130 117 0 7 chr5 150038681 150038990 -53046542 - AluSx SINE Alu -5 307 1 2244 82 3 0 chr5 150039378 150039670 -53045862 + AluSx SINE Alu 1 293 -19 2721 3 0 0 chr5 150039675 150039975 -53045557 + AluYa5 SINE Alu 12 311 0 390 182 182 0 chr5 150040092 150040206 -53045326 + FLAM_A SINE Alu 26 153 0 1864 136 0 7 chr5 150040216 150040525 -53045007 + AluSx SINE Alu 1 307 0 594 322 171 9 chr5 150040963 150041385 -53044147 + L3 LINE CR1 997 1486 -91 31 44 0 0 chr5 150041412 150041457 -53044075 + AT_rich Low_complexity Low_complexity 1 45 0 575 148 0 37 chr5 150041512 150041620 -53043912 - FLAM_C SINE Alu -1 142 39 3258 126 53 54 chr5 150041734 150042379 -53043153 - LTR48B LTR ERV1 0 644 1 335 182 0 100 chr5 150043248 150043358 -53042174 + MER53 DNA DNA 2 100 -89 2033 124 3 10 chr5 150043408 150043714 -53041818 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr5 150043802 150043830 -53041702 + AT_rich Low_complexity Low_complexity 1 28 0 520 216 20 129 chr5 150043832 150043886 -53041646 - HAL1 LINE L1 0 2507 2449 1499 199 11 0 chr5 150043886 150044173 -53041359 + AluJo SINE Alu 1 290 -22 520 216 20 129 chr5 150044173 150044373 -53041159 - HAL1 LINE L1 -58 2449 2281 1838 98 15 95 chr5 150044379 150044715 -53040817 - AluSc SINE Alu 0 309 1 1016 221 26 19 chr5 150044715 150044982 -53040550 - HAL1 LINE L1 -865 1642 1374 453 275 129 117 chr5 150045025 150045855 -53039677 - HAL1 LINE L1 -1666 841 2 2080 124 3 0 chr5 150046018 150046324 -53039208 - AluSx SINE Alu 0 312 6 388 312 40 30 chr5 150046778 150046980 -53038552 - L2 LINE L2 -419 2895 2692 2063 135 0 0 chr5 150046984 150047295 -53038237 + AluSx SINE Alu 1 311 -1 1023 118 0 86 chr5 150047295 150047481 -53038051 + AluSg/x SINE Alu 134 303 -9 291 273 8 98 chr5 150047545 150047585 -53037947 - MER5A DNA MER1_type -25 164 122 2246 89 3 0 chr5 150047585 150047878 -53037654 + AluSp SINE Alu 1 294 -19 291 273 8 98 chr5 150047878 150047969 -53037563 - MER5A DNA MER1_type -67 122 45 448 320 89 10 chr5 150048409 150048612 -53036920 + MIR SINE MIR 12 230 -32 2063 112 3 3 chr5 150048739 150049033 -53036499 - AluSx SINE Alu -18 294 1 604 257 54 7 chr5 150050148 150050296 -53035236 + MIR SINE MIR 28 182 -80 22 0 0 0 chr5 150052507 150052529 -53033003 + AT_rich Low_complexity Low_complexity 1 22 0 2266 107 3 25 chr5 150052555 150052872 -53032660 + AluSx SINE Alu 1 310 -2 427 92 0 0 chr5 150052928 150052993 -53032539 + Alu SINE Alu 245 309 -3 611 172 122 46 chr5 150053005 150053281 -53032251 - LTR37A LTR ERV1 -87 339 56 2386 96 0 0 chr5 150054204 150054496 -53031036 + AluSx SINE Alu 1 292 -20 41 0 0 0 chr5 150054496 150054537 -53030995 + AT_rich Low_complexity Low_complexity 1 41 0 2183 141 3 0 chr5 150054538 150054850 -53030682 + AluSq SINE Alu 1 313 0 252 0 0 0 chr5 150054954 150054982 -53030550 + (TG)n Simple_repeat Simple_repeat 2 29 0 1417 77 111 5 chr5 150055072 150055280 -53030252 + MER30 DNA MER1_type 1 230 0 420 319 146 0 chr5 150055328 150055472 -53030060 - L2 LINE L2 -1 3271 3107 602 0 27 0 chr5 150055596 150055669 -53029863 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2294 98 9 19 chr5 150055672 150055987 -53029545 - AluSx SINE Alu 0 312 1 487 332 155 26 chr5 150056005 150056547 -53028985 - L2 LINE L2 -458 2856 2245 230 242 97 48 chr5 150056773 150056897 -53028635 + MLT1J2 LTR MaLR 101 230 -220 854 125 20 13 chr5 150056902 150057054 -53028478 + MLT1A1 LTR MaLR 1 153 -212 2213 133 0 16 chr5 150057057 150057431 -53028101 + AluSx SINE Alu 1 369 0 22 0 0 0 chr5 150059844 150059866 -53025666 + AT_rich Low_complexity Low_complexity 1 22 0 2326 100 3 25 chr5 150059892 150060211 -53025321 + AluSx SINE Alu 1 312 0 424 92 0 0 chr5 150060264 150060329 -53025203 + Alu SINE Alu 245 309 -3 582 174 116 87 chr5 150060341 150060617 -53024915 - LTR37A LTR ERV1 -87 339 56 2254 105 9 19 chr5 150061216 150061531 -53024001 - AluSx SINE Alu 0 312 1 487 332 155 26 chr5 150061549 150062091 -53023441 - L2 LINE L2 -458 2856 2245 230 242 97 48 chr5 150062317 150062441 -53023091 + MLT1J2 LTR MaLR 101 230 -220 854 180 51 97 chr5 150062446 150062601 -53022931 + MLT1A1 LTR MaLR 1 162 -228 2212 133 0 16 chr5 150062601 150062918 -53022614 + AluSx SINE Alu 1 312 0 854 180 51 97 chr5 150062918 150062977 -53022555 + MLT1A1 LTR MaLR 162 222 -168 2398 110 0 0 chr5 150062977 150063286 -53022246 - AluSc SINE Alu 0 309 1 854 180 51 97 chr5 150063286 150063492 -53022040 + MLT1A1 LTR MaLR 222 390 0 468 281 38 43 chr5 150063492 150063694 -53021838 + MLT1J2 LTR MaLR 246 450 0 234 157 39 0 chr5 150064667 150064718 -53020814 - MLT1J LTR MaLR -29 482 430 198 0 0 0 chr5 150064718 150064740 -53020792 + (A)n Simple_repeat Simple_repeat 1 22 0 1894 223 134 6 chr5 150064827 150065298 -53020234 - MLT1F LTR MaLR -11 531 1 952 201 99 49 chr5 150065298 150065584 -53019948 - MLT1J LTR MaLR -175 336 1 228 67 0 0 chr5 150065706 150065736 -53019796 + (TG)n Simple_repeat Simple_repeat 1 30 0 1654 199 3 3 chr5 150067559 150067851 -53017681 + AluJo SINE Alu 1 292 -20 198 295 18 98 chr5 150069462 150069574 -53015958 - MIR SINE MIR -83 125 23 399 344 110 35 chr5 150069921 150070038 -53015494 - L2 LINE L2 -165 3107 3000 2345 78 0 0 chr5 150070038 150070343 -53015189 + AluSx SINE Alu 1 305 0 399 344 110 35 chr5 150070343 150070740 -53014792 - L2 LINE L2 -272 3000 2542 443 129 0 0 chr5 150071301 150071363 -53014169 - FLAM SINE Alu -25 118 57 1090 168 0 6 chr5 150071579 150071758 -53013774 + FRAM SINE Alu 1 175 -1 2329 107 0 0 chr5 150072675 150072975 -53012557 + AluSg SINE Alu 1 300 -10 2932 220 13 26 chr5 150073139 150073789 -53011743 + L1MB3 LINE L1 4590 5228 -930 2118 113 25 0 chr5 150073789 150074073 -53011459 - AluSx SINE Alu -20 292 2 2932 220 13 26 chr5 150074073 150074233 -53011299 + L1MB3 LINE L1 5228 5389 -769 911 117 0 0 chr5 150074246 150074366 -53011166 - FLAM_C SINE Alu -15 128 9 4129 155 31 28 chr5 150074377 150074494 -53011038 + L1MB3 LINE L1 5368 5483 -700 2511 72 0 3 chr5 150074494 150074801 -53010731 + AluY SINE Alu 1 306 -5 4129 155 31 28 chr5 150074801 150075367 -53010165 + L1MB3 LINE L1 5483 6056 -127 2211 118 0 3 chr5 150075367 150075673 -53009859 + AluSx SINE Alu 1 305 -7 4129 155 31 28 chr5 150075673 150075800 -53009732 + L1MB3 LINE L1 6056 6181 -2 1000 121 14 0 chr5 150076215 150076355 -53009177 - AluSg/x SINE Alu -14 296 155 1553 176 52 35 chr5 150076384 150076674 -53008858 + AluJo SINE Alu 1 295 -17 296 320 0 10 chr5 150076693 150076796 -53008736 + MIR SINE MIR 161 262 0 378 269 50 0 chr5 150076941 150077060 -53008472 + MIR SINE MIR 130 254 -8 270 136 0 0 chr5 150077063 150077107 -53008425 + (ATG)n Simple_repeat Simple_repeat 1 44 0 2251 102 0 38 chr5 150077304 150077440 -53008092 + AluSx SINE Alu 1 141 -171 1292 27 0 0 chr5 150077440 150077590 -53007942 + L1PA5 LINE L1 6001 6150 -4 2251 102 0 38 chr5 150077590 150077766 -53007766 + AluSx SINE Alu 141 301 -11 724 291 111 9 chr5 150077923 150078273 -53007259 - L2 LINE L2 -562 2752 2367 269 293 127 29 chr5 150079589 150079794 -53005738 - L3 LINE CR1 -90 1487 1263 788 173 15 8 chr5 150079931 150080064 -53005468 + AluJb SINE Alu 169 302 -10 2221 100 28 0 chr5 150080073 150080364 -53005168 + AluSx SINE Alu 1 299 -13 339 85 0 0 chr5 150080364 150080411 -53005121 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 * 418 107 13 13 chr5 150080406 150080481 -53005051 + (GAAAA)n Simple_repeat Simple_repeat 4 78 0 2164 135 13 0 chr5 150081256 150081560 -53003972 + AluJo SINE Alu 5 312 0 337 265 88 0 chr5 150081764 150081866 -53003666 + MIR SINE MIR 35 145 -63 515 292 66 0 chr5 150083586 150083723 -53001809 + MIR SINE MIR 94 239 -23 189 74 0 0 chr5 150084216 150084243 -53001289 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1627 159 0 36 chr5 150084422 150084591 -53000941 - AluJo SINE Alu -11 301 144 2231 101 27 0 chr5 150084591 150084887 -53000645 - AluSx SINE Alu -8 304 1 1627 159 0 36 chr5 150084887 150084994 -53000538 - AluJo SINE Alu -168 144 35 584 221 50 68 chr5 150085650 150085880 -52999652 + MIR SINE MIR 30 261 -1 1914 149 17 10 chr5 150087470 150087759 -52997773 + AluJb SINE Alu 21 311 -1 1084 156 28 11 chr5 150088556 150088735 -52996797 + AluSg/x SINE Alu 126 307 -3 2934 27 0 0 chr5 150089430 150089768 -52995764 - L1PA3 LINE L1 -3 6152 5815 624 114 107 0 chr5 150089774 150089905 -52995627 - L1MB7 LINE L1 0 6184 6040 2189 129 3 0 chr5 150089928 150090222 -52995310 + AluSx SINE Alu 1 295 -17 237 167 0 0 chr5 150090222 150090276 -52995256 + (TA)n Simple_repeat Simple_repeat 1 54 0 3093 165 34 22 chr5 150090276 150090377 -52995155 - L1MB8 LINE L1 -153 6025 5927 2240 77 24 3 chr5 150090377 150090664 -52994868 - AluSp SINE Alu -20 293 1 3093 165 34 22 chr5 150090664 150091204 -52994328 - L1MB8 LINE L1 -251 5927 5376 884 128 0 15 chr5 150091204 150091337 -52994195 - FLAM_C SINE Alu -12 131 1 6821 205 54 21 chr5 150091338 150091582 -52993950 - L1MB8 LINE L1 -749 5397 5163 2015 153 7 7 chr5 150091582 150091883 -52993649 - AluJb SINE Alu -11 301 1 6821 205 54 21 chr5 150091883 150091984 -52993548 - L1MB8 LINE L1 -983 5163 5067 2232 111 57 20 chr5 150091984 150092335 -52993197 - THE1B LTR MaLR 0 364 1 6821 205 54 21 chr5 150092335 150092419 -52993113 - L1MB8 LINE L1 -1079 5067 4987 2254 123 0 0 chr5 150092419 150092719 -52992813 - AluSx SINE Alu -12 300 1 6821 205 54 21 chr5 150092719 150092833 -52992699 - L1MB8 LINE L1 -1159 4987 4878 2343 108 3 0 chr5 150092833 150093139 -52992393 + AluSq SINE Alu 1 307 -6 6821 205 54 21 chr5 150093139 150094322 -52991210 - L1MB8 LINE L1 -1268 4878 3611 2237 106 0 29 chr5 150094323 150094635 -52990897 - AluSq SINE Alu -10 303 1 237 218 13 39 chr5 150094677 150094755 -52990777 - L1ME4a LINE L1 -49 6072 5997 2440 78 3 0 chr5 150094763 150095057 -52990475 - AluSp SINE Alu -18 295 1 927 144 62 0 chr5 150095067 150095213 -52990319 - AluSg/x SINE Alu -23 287 133 251 252 144 0 chr5 150095213 150095324 -52990208 - L1ME4a LINE L1 -116 6005 5879 1777 123 31 49 chr5 150095355 150095704 -52989828 + L1MB5 LINE L1 5790 6132 -42 567 182 0 50 chr5 150095714 150095774 -52989758 + L1M4 LINE L1 3641 3694 -2452 1801 179 16 13 chr5 150095774 150096081 -52989451 + AluJb SINE Alu 1 308 -4 567 182 0 50 chr5 150096081 150096141 -52989391 + L1M4 LINE L1 3694 3755 -2391 636 175 16 48 chr5 150096153 150096279 -52989253 - FLAM_C SINE Alu -11 122 1 2540 78 0 0 chr5 150096374 150096680 -52988852 + AluSx SINE Alu 1 306 -6 2491 63 3 10 chr5 150096717 150097020 -52988512 + AluY SINE Alu 1 301 -10 1906 105 25 22 chr5 150097271 150097594 -52987938 - AluSx SINE Alu 0 330 7 225 50 125 0 chr5 150097608 150097648 -52987884 - L1ME LINE L1 -461 5660 5616 2237 193 2 7 chr5 150097648 150098062 -52987470 + MER66B LTR ERV1 1 412 -74 952 118 0 29 chr5 150098080 150098216 -52987316 + AluSg SINE Alu 1 132 -178 2112 109 36 20 chr5 150098216 150098333 -52987199 + AluSc SINE Alu 1 115 -194 183 42 0 0 chr5 150098333 150098357 -52987175 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2112 109 36 20 chr5 150098357 150098542 -52986990 + AluSc SINE Alu 115 308 -1 699 135 0 0 chr5 150098542 150098646 -52986886 + MER66B LTR ERV1 383 486 0 1575 195 50 0 chr5 150098750 150099032 -52986500 + AluJb SINE Alu 1 296 -16 180 0 0 0 chr5 150099047 150099067 -52986465 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2120 121 0 7 chr5 150099069 150099351 -52986181 - AluSx SINE Alu -32 280 1 939 202 6 0 chr5 150099360 150099528 -52986004 - FRAM SINE Alu -10 166 1 274 286 130 0 chr5 150099612 150099766 -52985766 + L1M4 LINE L1 5127 5300 -846 3098 186 7 4 chr5 150099776 150100323 -52985209 - MER44D DNA MER2_type 0 605 2 1190 277 74 80 chr5 150100326 150100543 -52984989 + L1M4 LINE L1 2942 3159 -2987 2314 111 0 0 chr5 150100543 150100832 -52984700 - AluSg SINE Alu -16 294 6 1190 277 74 80 chr5 150100832 150101123 -52984409 + L1M4 LINE L1 3159 3450 -2696 2104 124 3 3 chr5 150101123 150101414 -52984118 + AluSq SINE Alu 1 291 -22 1190 277 74 80 chr5 150101414 150101772 -52983760 + L1M4 LINE L1 3450 3808 -2338 2180 87 47 7 chr5 150101772 150102071 -52983461 + AluSp SINE Alu 1 311 -2 1190 277 74 80 chr5 150102071 150102173 -52983359 + L1M4 LINE L1 3808 3909 -2237 2440 81 10 0 chr5 150102173 150102471 -52983061 - AluSq SINE Alu -12 301 1 1190 277 74 80 chr5 150102471 150102496 -52983036 + L1M4 LINE L1 3909 3933 -2213 2736 48 0 0 chr5 150102496 150102807 -52982725 - AluY SINE Alu 0 311 1 1190 277 74 80 chr5 150102807 150102978 -52982554 + L1M4 LINE L1 3933 4104 -2042 670 95 0 9 chr5 150102979 150103084 -52982448 - AluY SINE Alu -6 305 202 243 139 0 0 chr5 150103084 150103120 -52982412 - Alu SINE Alu -50 251 216 337 172 0 0 chr5 150103120 150103178 -52982354 - AluY SINE Alu -42 259 202 264 236 0 0 chr5 150103161 150103216 -52982316 - AluSg/x SINE Alu -33 267 213 * 366 155 0 0 chr5 150103214 150103272 -52982260 - AluY SINE Alu -42 259 202 288 218 0 0 chr5 150103255 150103310 -52982222 - AluY SINE Alu -33 268 214 * 435 121 0 0 chr5 150103308 150103366 -52982166 - AluY SINE Alu -52 259 202 2123 90 0 0 chr5 150103349 150103617 -52981915 - AluY SINE Alu -43 268 1 233 394 7 0 chr5 150103637 150103779 -52981753 + L1ME LINE L1 3955 4097 -2049 602 100 0 10 chr5 150103785 150103885 -52981647 - AluY SINE Alu -11 300 202 243 139 0 0 chr5 150103885 150103921 -52981611 - Alu SINE Alu -50 251 216 347 155 0 0 chr5 150103921 150103979 -52981553 - AluY SINE Alu -42 259 202 261 196 0 0 chr5 150103971 150104017 -52981515 - AluSp/q SINE Alu -43 260 215 * 366 155 0 0 chr5 150104015 150104073 -52981459 - AluY SINE Alu -42 259 202 288 218 0 0 chr5 150104056 150104111 -52981421 - AluY SINE Alu -33 268 214 * 294 122 0 0 chr5 150104109 150104150 -52981382 - AluS SINE Alu -42 260 220 2074 93 0 0 chr5 150104150 150104418 -52981114 - AluY SINE Alu -43 268 1 234 0 0 0 chr5 150104420 150104446 -52981086 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1951 115 66 46 chr5 150104502 150104807 -52980725 + AluSx SINE Alu 2 312 0 1970 287 79 15 chr5 150104807 150105202 -52980330 + L1ME LINE L1 4183 4551 -1619 1678 154 3 46 chr5 150105202 150105487 -52980045 + AluJo SINE Alu 1 273 -39 1970 287 79 15 chr5 150105487 150106544 -52978988 + L1ME LINE L1 4551 5724 -446 1024 330 63 9 chr5 150106545 150106618 -52978914 - LTR16A LTR ERVL 0 450 382 1698 160 51 106 chr5 150106618 150107003 -52978529 + MSTB LTR MaLR 1 359 -67 2292 134 0 0 chr5 150107003 150107316 -52978216 - AluSq SINE Alu 0 313 1 1698 160 51 106 chr5 150107316 150107381 -52978151 + MSTB LTR MaLR 359 426 0 1024 330 63 9 chr5 150107381 150107734 -52977798 - LTR16A LTR ERVL -68 382 1 2524 187 115 31 chr5 150107843 150108308 -52977224 - L1ME1 LINE L1 -209 5957 5533 2349 116 0 0 chr5 150108308 150108619 -52976913 - AluSx SINE Alu -1 311 1 2524 187 115 31 chr5 150108619 150109192 -52976340 - L1ME1 LINE L1 -633 5533 4824 316 310 84 71 chr5 150109207 150109433 -52976099 - L1M4 LINE L1 -1127 5019 4791 2042 144 0 26 chr5 150109461 150109767 -52975765 - AluSx SINE Alu -14 298 1 5235 252 138 9 chr5 150109921 150111845 -52973687 + L2 LINE L2 109 2280 -1034 216 302 158 14 chr5 150113241 150113380 -52972152 - L3 LINE CR1 -107 1470 1312 * 239 310 115 0 chr5 150113362 150113449 -52972083 + MIR SINE MIR 45 141 -67 956 278 37 96 chr5 150113464 150114037 -52971495 - LTR67 LTR ERVL -10 547 9 1037 188 0 0 chr5 150114091 150114261 -52971271 + FRAM SINE Alu 1 170 -6 1252 279 81 61 chr5 150114651 150115222 -52970310 + MLT1K LTR MaLR 1 582 -6 2578 63 0 0 chr5 150115862 150116163 -52969369 - AluY SINE Alu -10 301 1 2158 131 23 0 chr5 150116635 150116940 -52968592 + AluSx SINE Alu 1 312 0 974 170 30 3 chr5 150116953 150117191 -52968341 + AluJb SINE Alu 2 312 0 2153 69 98 4 chr5 150117419 150117695 -52967837 + AluSx SINE Alu 1 302 -10 1676 212 157 16 chr5 150117869 150118384 -52967148 + L1ME3A LINE L1 5556 6143 -27 2760 140 56 62 chr5 150118384 150118651 -52966881 - Tigger3(Golem) DNA MER2_type 0 3029 2762 2255 101 3 20 chr5 150118651 150118949 -52966583 + AluSx SINE Alu 1 293 -19 2760 140 56 62 chr5 150118949 150119122 -52966410 - Tigger3(Golem) DNA MER2_type -267 2762 2589 1861 162 3 48 chr5 150119122 150119436 -52966096 + AluJb SINE Alu 1 300 -12 2760 140 56 62 chr5 150119436 150119482 -52966050 - Tigger3(Golem) DNA MER2_type -440 2589 2544 1421 138 106 58 chr5 150119482 150119757 -52965775 + AluJo SINE Alu 1 288 -24 2760 140 56 62 chr5 150119757 150119826 -52965706 - Tigger3(Golem) DNA MER2_type -485 2544 2474 3076 79 22 7 chr5 150119826 150120252 -52965280 - L1PA11 LINE L1 0 6174 5739 727 122 0 0 chr5 150120252 150120359 -52965173 - U6 snRNA snRNA 0 107 1 3076 79 22 7 chr5 150120359 150120376 -52965156 - L1PA11 LINE L1 -435 5739 5724 2760 140 56 62 chr5 150120376 150120425 -52965107 - Tigger3(Golem) DNA MER2_type -555 2474 2426 2389 101 0 0 chr5 150120425 150120732 -52964800 - AluSg SINE Alu -1 309 3 1727 141 112 0 chr5 150120732 150121044 -52964488 - Tigger3(Golem) DNA MER2_type -2682 347 1 1983 128 3 7 chr5 150121089 150121399 -52964133 + AluSx SINE Alu 1 309 0 189 352 42 14 chr5 150122391 150122462 -52963070 + MIR SINE MIR 29 101 -107 987 185 111 32 chr5 150122576 150122784 -52962748 - MER58B DNA MER1_type -2080 340 72 2425 103 0 0 chr5 150122784 150123085 -52962447 + AluSx SINE Alu 1 301 -11 987 185 111 32 chr5 150123085 150123160 -52962372 - MER58B DNA MER1_type -2348 72 4 466 219 18 35 chr5 150123244 150123358 -52962174 + MER81 DNA DNA 3 114 0 609 270 103 0 chr5 150124152 150124326 -52961206 - MIR SINE MIR -14 248 57 2241 106 6 13 chr5 150125186 150125498 -52960034 + AluSg SINE Alu 1 310 0 2262 98 3 3 chr5 150125513 150125809 -52959723 + AluSq SINE Alu 2 297 -16 182 286 71 20 chr5 150127076 150127174 -52958358 + L3 LINE CR1 1438 1540 -37 458 179 36 0 chr5 150127174 150127258 -52958274 - AluJ/FLAM SINE Alu -225 87 1 1059 182 0 0 chr5 150127403 150127573 -52957959 + AluJb SINE Alu 137 306 -6 2483 83 3 6 chr5 150127874 150128188 -52957344 + AluSp SINE Alu 1 313 0 1156 251 61 54 chr5 150128190 150128334 -52957198 + MLT1C LTR MaLR 34 175 -292 635 153 9 0 chr5 150128334 150128445 -52957087 + L1MA4 LINE L1 6182 6293 -7 1156 251 61 54 chr5 150128445 150128480 -52957052 + MLT1C LTR MaLR 175 208 -259 1718 170 0 14 chr5 150128480 150128763 -52956769 + AluJo SINE Alu 1 279 -33 1156 251 61 54 chr5 150128763 150129009 -52956523 + MLT1C LTR MaLR 208 463 -4 265 328 141 28 chr5 150129102 150129279 -52956253 + L2 LINE L2 3076 3272 0 363 248 22 15 chr5 150129717 150129880 -52955652 - L2 LINE L2 -307 3006 2843 849 207 6 12 chr5 150129882 150130051 -52955481 - MLT1D LTR MaLR -337 168 1 1948 154 7 3 chr5 150130596 150130889 -52954643 - AluJo SINE Alu -14 298 5 343 82 16 16 chr5 150131165 150131226 -52954306 + (CA)n Simple_repeat Simple_repeat 2 62 0 216 122 0 0 chr5 150133099 150133140 -52952392 + (T)n Simple_repeat Simple_repeat 1 41 0 2555 74 0 0 chr5 150133197 150133506 -52952026 - AluY SINE Alu -2 309 1 1953 148 30 20 chr5 150133608 150133775 -52951757 - AluJb SINE Alu -4 308 135 2500 73 3 0 chr5 150133775 150134075 -52951457 - AluSq SINE Alu -12 301 1 1953 148 30 20 chr5 150134075 150134212 -52951320 - AluJb SINE Alu -177 135 1 293 296 0 11 chr5 150134240 150134346 -52951186 - L1ME LINE L1 -347 5774 5670 2370 56 52 3 chr5 150134870 150135156 -52950376 - AluY SINE Alu -11 300 1 868 210 0 0 chr5 150135162 150135329 -52950203 - FRAM SINE Alu -9 167 1 1857 171 3 22 chr5 150135399 150135715 -52949817 + AluJo SINE Alu 1 310 -2 278 269 39 58 chr5 150136293 150136397 -52949135 + L2 LINE L2 3168 3269 -3 340 197 0 0 chr5 150136640 150136701 -52948831 + MER5A DNA MER1_type 13 73 -116 2049 110 3 24 chr5 150136702 150137021 -52948511 + AluSx SINE Alu 1 313 0 2059 138 0 19 chr5 150137037 150137355 -52948177 + AluJo SINE Alu 1 312 0 1555 98 5 5 chr5 150137356 150137560 -52947972 + AluSx SINE Alu 1 204 -108 33 0 0 0 chr5 150137560 150137593 -52947939 + AT_rich Low_complexity Low_complexity 1 33 0 1294 139 45 0 chr5 150137884 150138085 -52947447 + 7SLRNA srpRNA srpRNA 1 210 -110 2441 70 0 3 chr5 150138210 150138508 -52947024 + AluSq SINE Alu 3 299 -14 1189 129 0 0 chr5 150138508 150138671 -52946861 + AluSg/x SINE Alu 132 294 -16 783 108 0 0 chr5 150138671 150138791 -52946741 + (TA)n Simple_repeat Simple_repeat 2 121 0 928 143 0 0 chr5 150138800 150138933 -52946599 + FLAM_C SINE Alu 1 133 -10 1318 113 0 0 chr5 150139108 150139276 -52946256 + AluSq SINE Alu 1 168 -145 273 316 0 0 chr5 150139314 150139393 -52946139 + MER5A DNA MER1_type 61 139 -50 2115 119 18 0 chr5 150139395 150139681 -52945851 + AluSq SINE Alu 1 291 -22 2536 87 0 0 chr5 150139687 150139997 -52945535 + AluSx SINE Alu 1 310 -2 512 291 0 8 chr5 150140057 150140191 -52945341 - MIR SINE MIR -115 147 15 237 380 44 0 chr5 150140289 150140402 -52945130 + L2 LINE L2 3150 3267 -5 3091 246 80 13 chr5 150140513 150141502 -52944030 + L2 LINE L2 1819 2954 -359 1693 167 98 83 chr5 150141511 150141991 -52943541 - Charlie4a DNA MER1_type -4 504 18 218 301 126 77 chr5 150142069 150142293 -52943239 + L2 LINE L2 2984 3196 -117 1081 115 23 0 chr5 150142293 150142467 -52943065 - L1PA11 LINE L1 0 6174 5997 218 301 126 77 chr5 150142467 150142490 -52943042 + L2 LINE L2 3196 3216 -97 203 0 0 36 chr5 150142490 150142518 -52943014 + (TG)n Simple_repeat Simple_repeat 2 28 0 218 301 126 77 chr5 150142518 150142555 -52942977 + L2 LINE L2 3216 3283 -30 285 263 61 44 chr5 150142990 150143104 -52942428 + MIR3 SINE MIR 1 116 -92 347 296 17 0 chr5 150143461 150143576 -52941956 - MIR3 SINE MIR -54 154 38 25 65 0 0 chr5 150145888 150145934 -52939598 + GC_rich Low_complexity Low_complexity 1 46 0 23 33 0 0 chr5 150145959 150145989 -52939543 + GC_rich Low_complexity Low_complexity 1 30 0 225 175 53 0 chr5 150146162 150146219 -52939313 + (CTCG)n Simple_repeat Simple_repeat 3 62 0 38 22 0 0 chr5 150146399 150146444 -52939088 + GC_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr5 150146953 150146993 -52938539 + GC_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 150147226 150147250 -52938282 + GC_rich Low_complexity Low_complexity 1 24 0 201 208 42 0 chr5 150147258 150147306 -52938226 + CT-rich Low_complexity Low_complexity 1 50 0 456 246 127 77 chr5 150149495 150149715 -52935817 + MIR SINE MIR 32 262 0 680 267 71 97 chr5 150151152 150151514 -52934018 - L2 LINE L2 -245 3068 2698 749 185 0 15 chr5 150151514 150151649 -52933883 - FLAM_A SINE Alu 0 133 1 680 267 71 97 chr5 150151649 150151663 -52933869 - L2 LINE L2 -615 2698 2685 2148 132 0 7 chr5 150151663 150151958 -52933574 - AluSx SINE Alu -19 293 1 1977 155 37 0 chr5 150151958 150152254 -52933278 - AluJb SINE Alu 0 312 5 680 267 71 97 chr5 150152254 150152417 -52933115 - L2 LINE L2 -626 2687 2538 424 209 43 17 chr5 150153375 150153490 -52932042 + Charlie8 DNA MER1_type 34 151 -2266 186 103 0 0 chr5 150153718 150153747 -52931785 + (GGCTG)n Simple_repeat Simple_repeat 1 29 0 1802 157 3 0 chr5 150153808 150154101 -52931431 - AluJb SINE Alu 0 312 19 363 282 51 23 chr5 150154173 150154347 -52931185 + MIR SINE MIR 12 192 -67 203 293 17 0 chr5 150155057 150155115 -52930417 + MIR SINE MIR 23 81 -181 400 263 110 8 chr5 150156373 150156491 -52929041 + L2 LINE L2 3143 3272 0 830 249 15 5 chr5 150157407 150157612 -52927920 - MIR SINE MIR 0 262 56 290 268 0 24 chr5 150158758 150158840 -52926692 + LTR16C LTR ERVL 410 489 -2 421 323 32 16 chr5 150158858 150159044 -52926488 + MER5A DNA MER1_type 1 189 0 283 232 162 0 chr5 150159892 150159946 -52925586 - MIR SINE MIR 0 262 218 1740 187 10 0 chr5 150159946 150160251 -52925281 - AluJo SINE Alu -4 308 1 283 232 162 0 chr5 150160251 150160295 -52925237 - MIR SINE MIR -44 218 148 348 0 0 0 chr5 150160299 150160339 -52925193 - THE1C LTR MaLR -335 40 1 183 274 16 16 chr5 150160339 150160401 -52925131 - MIR SINE MIR -104 158 97 1365 105 0 0 chr5 150210642 150210813 -52874719 - AluSx SINE Alu -141 171 1 700 115 9 0 chr5 150210814 150210927 -52874605 - LTR39 LTR ERV1 -159 624 511 1958 132 7 43 chr5 150210927 150211231 -52874301 - AluJo SINE Alu -19 293 1 1792 116 47 0 chr5 150211231 150211508 -52874024 - LTR39 LTR ERV1 -493 290 1 262 323 46 39 chr5 150211519 150211649 -52873883 - L2 LINE L2 -194 3078 2948 728 108 0 0 chr5 150211845 150211947 -52873585 + U6 snRNA snRNA 1 102 -5 1544 140 55 8 chr5 150211977 150212234 -52873298 + AluJo SINE Alu 1 269 -43 662 110 10 0 chr5 150212335 150212435 -52873097 + AluY SINE Alu 196 296 -15 1224 165 40 0 chr5 150212520 150212769 -52872763 - L1MB7 LINE L1 -8 6176 5918 1731 205 0 0 chr5 150213162 150213474 -52872058 - AluSx SINE Alu 0 312 1 31 0 0 0 chr5 150213482 150213513 -52872019 + AT_rich Low_complexity Low_complexity 1 31 0 1865 140 52 0 chr5 150213630 150213916 -52871616 - AluSg SINE Alu -9 301 1 2337 102 0 0 chr5 150213928 150214223 -52871309 - AluSg SINE Alu -15 295 1 482 337 82 7 chr5 150214226 150214496 -52871036 + L2 LINE L2 2508 2797 -517 210 139 0 28 chr5 150214595 150214631 -52870901 - MIR SINE MIR -111 151 117 1663 181 0 20 chr5 150214732 150215025 -52870507 - AluJo SINE Alu -13 299 13 1439 174 12 12 chr5 150215276 150215518 -52870014 + AluSq SINE Alu 1 242 -71 240 35 0 0 chr5 150215520 150215549 -52869983 + (A)n Simple_repeat Simple_repeat 1 29 0 268 286 76 29 chr5 150215589 150215694 -52869838 - L2 LINE L2 -5 3308 3199 1798 146 55 4 chr5 150215827 150216102 -52869430 - AluJb SINE Alu -17 295 7 523 152 81 41 chr5 150216108 150216305 -52869227 - L1M4 LINE L1 -738 5440 5263 322 125 54 0 chr5 150216984 150217040 -52868492 - U7 snRNA snRNA -3 60 2 2326 109 0 28 chr5 150217061 150217382 -52868150 - AluSx SINE Alu 0 312 1 238 25 25 25 chr5 150217384 150217424 -52868108 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2437 34 0 0 chr5 150217424 150217693 -52867839 - AluY SINE Alu -30 281 13 1027 164 0 6 chr5 150218221 150218386 -52867146 + AluSg/x SINE Alu 100 263 -47 298 183 12 12 chr5 150218397 150218479 -52867053 + GA-rich Low_complexity Low_complexity 4 85 0 2576 54 0 13 chr5 150219215 150219529 -52866003 + AluY SINE Alu 1 310 -1 1556 103 0 0 chr5 150219778 150219972 -52865560 + AluSx SINE Alu 1 194 -118 1953 123 39 29 chr5 150220153 150220290 -52865242 + AluSx SINE Alu 1 135 -177 2271 110 0 0 chr5 150220290 150220589 -52864943 + AluSq SINE Alu 1 299 -14 1953 123 39 29 chr5 150220589 150220760 -52864772 + AluSx SINE Alu 135 312 0 376 102 0 0 chr5 150220760 150220809 -52864723 + AluSg/x SINE Alu 123 171 -129 1631 71 4 76 chr5 150220911 150221149 -52864383 - AluSg SINE Alu -89 221 1 1925 157 3 20 chr5 150221806 150221971 -52863561 - AluJb SINE Alu -11 301 142 2142 127 0 3 chr5 150221971 150222278 -52863254 - AluSx SINE Alu -6 306 1 1925 157 3 20 chr5 150222278 150222418 -52863114 - AluJb SINE Alu -170 142 1 1509 179 20 30 chr5 150222535 150222832 -52862700 - AluJo SINE Alu -18 294 1 604 137 0 0 chr5 150222842 150222937 -52862595 - AluSg/x SINE Alu -9 303 209 215 270 64 120 chr5 150223967 150224234 -52861298 - L2 LINE L2 -214 3058 2807 1006 182 6 0 chr5 150224632 150224797 -52860735 + FRAM SINE Alu 1 166 0 2417 103 3 0 chr5 150224811 150225122 -52860410 + AluSx SINE Alu 1 312 0 2250 99 3 3 chr5 150225788 150226081 -52859451 - AluSx SINE Alu -19 293 1 2322 108 0 0 chr5 150227534 150227841 -52857691 - AluSg SINE Alu -3 307 1 2042 121 37 3 chr5 150227842 150228139 -52857393 - AluSx SINE Alu -5 307 1 930 154 0 39 chr5 150228500 150228747 -52856785 + AluJb SINE Alu 1 308 -4 2116 132 13 0 chr5 150228959 150229263 -52856269 + AluSx SINE Alu 1 308 -4 832 189 0 26 chr5 150229421 150229596 -52855936 - AluJo SINE Alu 0 304 134 1616 118 0 0 chr5 150229914 150230126 -52855406 - AluSg SINE Alu -98 212 1 686 149 0 92 chr5 150230128 150230269 -52855263 - AluJo SINE Alu -183 129 2 1415 153 104 28 chr5 150230317 150230604 -52854928 - AluJb SINE Alu -3 309 1 38 0 0 0 chr5 150231130 150231168 -52854364 + AT_rich Low_complexity Low_complexity 1 38 0 1923 112 0 4 chr5 150231575 150231834 -52853698 - AluSx SINE Alu -8 304 47 360 197 0 0 chr5 150232013 150232074 -52853458 + MER5A DNA MER1_type 13 73 -116 2037 110 3 24 chr5 150232075 150232394 -52853138 + AluSx SINE Alu 1 313 0 2017 145 0 19 chr5 150232410 150232728 -52852804 + AluJo SINE Alu 1 312 0 1529 103 5 5 chr5 150232729 150232933 -52852599 + AluSx SINE Alu 1 204 -108 27 0 0 0 chr5 150232933 150232960 -52852572 + AT_rich Low_complexity Low_complexity 1 27 0 200 274 255 19 chr5 150232960 150233066 -52852466 + MER5A DNA MER1_type 59 189 0 1281 139 45 0 chr5 150233257 150233458 -52852074 + 7SLRNA srpRNA srpRNA 1 210 -110 1464 215 0 13 chr5 150233626 150233924 -52851608 + AluJb SINE Alu 12 305 -7 1892 87 12 103 chr5 150233930 150234061 -52851471 + AluSq SINE Alu 4 145 -168 2315 97 0 34 chr5 150234061 150234382 -52851150 + AluY SINE Alu 1 310 -1 1892 87 12 103 chr5 150234382 150234571 -52850961 + AluSq SINE Alu 145 295 -18 2101 130 17 0 chr5 150234580 150234879 -52850653 + AluSx SINE Alu 1 304 -8 2268 87 45 0 chr5 150234944 150235231 -52850301 + AluSq SINE Alu 1 300 -13 790 182 8 0 chr5 150235401 150235533 -52849999 + AluJo SINE Alu 1 133 -179 211 82 66 16 chr5 150235537 150235569 -52849963 + (TA)n Simple_repeat Simple_repeat 1 30 -34 2226 117 0 3 chr5 150235569 150235869 -52849663 + AluSx SINE Alu 1 299 -13 211 82 66 16 chr5 150235869 150235897 -52849635 + (TA)n Simple_repeat Simple_repeat 30 64 0 942 165 55 22 chr5 150235900 150236082 -52849450 + AluJo SINE Alu 125 312 0 2189 119 0 0 chr5 150236090 150236403 -52849129 + AluSq SINE Alu 1 313 0 936 130 0 27 chr5 150236481 150236627 -52848905 + AluSg/x SINE Alu 156 297 -15 198 329 0 13 chr5 150237718 150237794 -52847738 + L2 LINE L2 3198 3272 0 699 285 182 12 chr5 150239469 150239834 -52845698 + L2 LINE L2 2734 3152 -161 869 142 0 8 chr5 150239844 150239978 -52845554 - AluJb SINE Alu -179 133 1 2577 62 7 0 chr5 150240001 150240310 -52845222 - AluY SINE Alu 0 311 1 367 241 55 90 chr5 150240369 150240514 -52845018 + L2 LINE L2 3133 3272 0 2053 147 7 0 chr5 150240553 150240852 -52844680 - AluJb SINE Alu -3 309 9 1420 181 12 94 chr5 150241139 150241470 -52844062 - AluJb SINE Alu -8 304 1 2203 107 7 3 chr5 150241472 150241771 -52843761 - AluSg SINE Alu -10 300 1 870 69 0 0 chr5 150241771 150241872 -52843660 - AluSq/x SINE Alu -178 135 35 1242 190 0 9 chr5 150242026 150242237 -52843295 - AluJo SINE Alu -19 293 85 2252 134 0 0 chr5 150242245 150242558 -52842974 - AluSq SINE Alu 0 313 1 186 227 40 40 chr5 150242800 150242875 -52842657 + MER5A DNA MER1_type 1 75 -114 1313 113 0 0 chr5 150242875 150243043 -52842489 + AluSq SINE Alu 1 168 -145 292 250 14 142 chr5 150243081 150243162 -52842370 + MER5A DNA MER1_type 61 151 -38 2106 119 18 0 chr5 150243162 150243448 -52842084 + AluSq SINE Alu 1 291 -22 2502 93 0 0 chr5 150243454 150243764 -52841768 + AluSx SINE Alu 1 310 -2 292 250 14 142 chr5 150243764 150243823 -52841709 + MER5A DNA MER1_type 156 189 0 541 291 0 8 chr5 150243824 150243958 -52841574 - MIR SINE MIR -115 147 15 258 380 44 0 chr5 150244056 150244169 -52841363 + L2 LINE L2 3150 3267 -5 3316 251 77 9 chr5 150244280 150245268 -52840264 + L2 LINE L2 1819 2954 -359 1638 198 67 52 chr5 150245277 150245757 -52839775 - Charlie4a DNA MER1_type -4 504 18 286 287 125 83 chr5 150245832 150246059 -52839473 + L2 LINE L2 2983 3199 -114 1146 115 23 0 chr5 150246059 150246233 -52839299 - L1PA11 LINE L1 0 6174 5997 286 287 125 83 chr5 150246233 150246256 -52839276 + L2 LINE L2 3199 3220 -93 221 0 0 33 chr5 150246256 150246286 -52839246 + (TG)n Simple_repeat Simple_repeat 2 30 0 286 287 125 83 chr5 150246286 150246323 -52839209 + L2 LINE L2 3220 3283 -30 309 272 61 44 chr5 150246757 150246871 -52838661 + MIR3 SINE MIR 1 116 -92 374 296 17 0 chr5 150247228 150247343 -52838189 - MIR3 SINE MIR -54 154 38 25 65 0 0 chr5 150249660 150249706 -52835826 + GC_rich Low_complexity Low_complexity 1 46 0 23 33 0 0 chr5 150249731 150249761 -52835771 + GC_rich Low_complexity Low_complexity 1 30 0 225 175 53 0 chr5 150249934 150249991 -52835541 + (CTCG)n Simple_repeat Simple_repeat 3 62 0 38 22 0 0 chr5 150250171 150250216 -52835316 + GC_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr5 150250725 150250765 -52834767 + GC_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 150250998 150251022 -52834510 + GC_rich Low_complexity Low_complexity 1 24 0 201 208 42 0 chr5 150251030 150251078 -52834454 + CT-rich Low_complexity Low_complexity 1 50 0 194 309 0 37 chr5 150253216 150253297 -52832235 - L3 LINE CR1 -216 1361 1284 * 502 247 125 74 chr5 150253257 150253487 -52832045 + MIR SINE MIR 22 262 0 725 271 87 93 chr5 150254914 150255286 -52830246 - L2 LINE L2 -235 3078 2705 804 185 0 15 chr5 150255286 150255421 -52830111 - FLAM_A SINE Alu 0 133 1 725 271 87 93 chr5 150255421 150255435 -52830097 - L2 LINE L2 -608 2705 2692 2046 132 0 7 chr5 150255435 150255730 -52829802 - AluSx SINE Alu -19 293 1 1849 162 37 0 chr5 150255729 150256025 -52829507 - AluJb SINE Alu -1 311 5 * 725 271 87 93 chr5 150255730 150256211 -52829321 - L2 LINE L2 -621 2692 2504 384 252 26 0 chr5 150257146 150257261 -52828271 + Charlie8 DNA MER1_type 34 151 -2266 186 103 0 0 chr5 150257489 150257518 -52828014 + (GGCTG)n Simple_repeat Simple_repeat 1 29 0 1839 154 3 0 chr5 150257581 150257873 -52827659 - AluJb SINE Alu -1 311 19 380 328 71 12 chr5 150257945 150258184 -52827348 + MIR SINE MIR 12 262 0 219 333 111 21 chr5 150258653 150258797 -52826735 + MIR SINE MIR 63 219 -43 211 293 17 0 chr5 150258829 150258887 -52826645 + MIR SINE MIR 23 81 -181 401 263 110 8 chr5 150260145 150260263 -52825269 + L2 LINE L2 3143 3272 0 180 319 72 14 chr5 150260658 150260727 -52824805 + MIR3 SINE MIR 112 184 -24 826 246 14 14 chr5 150261179 150261386 -52824146 - MIR SINE MIR 0 262 56 506 259 249 36 chr5 150261970 150262360 -52823172 - L2 LINE L2 -357 2957 2485 2154 96 3 13 chr5 150262706 150262870 -52822662 - AluSx SINE Alu -14 298 137 2428 59 0 7 chr5 150262870 150263210 -52822322 - AluY SINE Alu 0 311 1 2154 96 3 13 chr5 150263210 150263346 -52822186 - AluSx SINE Alu -175 137 1 1883 158 0 47 chr5 150264059 150264381 -52821151 - AluJo SINE Alu -5 307 1 194 235 20 20 chr5 150266226 150266277 -52819255 - MER5B DNA MER1_type -69 109 59 2257 104 0 3 chr5 150266283 150266590 -52818942 - AluSp SINE Alu -7 306 1 1954 122 21 3 chr5 150266590 150266876 -52818656 - AluSx SINE Alu -21 291 1 2176 97 10 0 chr5 150266887 150267175 -52818357 - AluSg SINE Alu -15 295 5 2199 120 0 13 chr5 150267240 150267556 -52817976 + AluSx SINE Alu 1 312 0 334 231 0 0 chr5 150269493 150269558 -52815974 + MIR SINE MIR 87 151 -111 189 0 0 0 chr5 150269948 150269969 -52815563 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 967 155 13 0 chr5 150269989 150270190 -52815342 - AluJb SINE Alu 0 329 127 469 301 49 0 chr5 150270190 150270313 -52815219 - L2 LINE L2 -10 3262 3134 2296 88 0 0 chr5 150270335 150270630 -52814902 + AluSx SINE Alu 1 295 -17 477 324 124 16 chr5 150271612 150271927 -52813605 - L2 LINE L2 -1 3271 2923 539 322 57 20 chr5 150272115 150272338 -52813194 + MIR SINE MIR 14 234 -28 249 310 160 19 chr5 150272867 150273080 -52812452 - L2 LINE L2 -51 3262 3020 1024 125 0 0 chr5 150273091 150273227 -52812305 + AluSq/x SINE Alu 1 136 -176 2119 108 14 3 chr5 150273227 150273522 -52812010 + AluSx SINE Alu 1 298 -14 187 31 62 0 chr5 150275057 150275089 -52810443 + T-rich Low_complexity Low_complexity 2 35 0 1739 171 7 3 chr5 150275091 150275378 -52810154 - AluJb SINE Alu -24 288 1 844 148 7 0 chr5 150275392 150275527 -52810005 - AluJo SINE Alu -176 136 1 181 245 41 0 chr5 150275680 150275729 -52809803 - L2 LINE L2 -4 3309 3259 667 282 40 40 chr5 150276263 150276490 -52809042 + MIR SINE MIR 29 255 -7 1763 159 0 46 chr5 150276511 150276837 -52808695 - AluJb SINE Alu -1 311 1 1675 155 84 3 chr5 150276837 150277121 -52808411 - AluJo SINE Alu -5 307 1 2375 81 0 0 chr5 150277195 150277504 -52808028 - AluSc SINE Alu 0 309 1 198 284 184 0 chr5 150278710 150278819 -52806713 - MIR SINE MIR -15 247 119 294 0 43 21 chr5 150280264 150280311 -52805221 + (CA)n Simple_repeat Simple_repeat 2 49 0 620 83 47 39 chr5 150280773 150281257 -52804275 + (CA)n Simple_repeat Simple_repeat 1 487 0 410 278 9 0 chr5 150281258 150281373 -52804159 - MIR SINE MIR -21 241 126 192 111 0 0 chr5 150281412 150281448 -52804084 + (T)n Simple_repeat Simple_repeat 1 36 0 7233 13 0 0 chr5 150281536 150282696 -52802836 - L1HS LINE L1 0 6155 4996 2105 112 3 0 chr5 150282707 150282994 -52802538 - AluSp SINE Alu -25 288 1 465 227 36 27 chr5 150282995 150283105 -52802427 - MIR SINE MIR -103 159 49 250 284 0 49 chr5 150284299 150284380 -52801152 + MIR SINE MIR 104 180 -82 187 325 25 12 chr5 150284678 150284758 -52800774 - MIR3 SINE MIR -6 202 122 472 284 157 5 chr5 150285442 150285639 -52799893 + MIR SINE MIR 36 262 0 2009 113 31 0 chr5 150286647 150286939 -52798593 + AluSx SINE Alu 1 301 -11 1657 119 27 19 chr5 150287231 150287491 -52798041 + AluSx SINE Alu 40 301 -11 355 284 28 51 chr5 150289177 150289353 -52796179 + MER5A DNA MER1_type 11 182 -7 1966 90 65 0 chr5 150289719 150289996 -52795536 + AluSx SINE Alu 1 295 -17 212 191 118 44 chr5 150292353 150292421 -52793111 - MIR3 SINE MIR -31 177 105 313 305 46 23 chr5 150293153 150293284 -52792248 + MIR SINE MIR 46 179 -83 1318 214 146 8 chr5 150295124 150295502 -52790030 - MLT1C LTR MaLR -31 436 7 2236 94 0 0 chr5 150295573 150295871 -52789661 + AluSg SINE Alu 1 298 -12 259 338 177 6 chr5 150299453 150299729 -52785803 - L2 LINE L2 -208 3064 2742 1440 169 81 28 chr5 150299784 150300068 -52785464 + AluJo SINE Alu 3 301 -11 1896 160 7 0 chr5 150300075 150300369 -52785163 + AluJo SINE Alu 1 296 -16 193 339 0 18 chr5 150300511 150300567 -52784965 - MIR3 SINE MIR -140 68 14 981 141 0 0 chr5 150301702 150301844 -52783688 + AluJb SINE Alu 138 279 -33 430 251 21 70 chr5 150302190 150302290 -52783242 + MER45A DNA AcHobo 1 89 -1492 345 89 54 0 chr5 150302290 150302346 -52783186 - U7 snRNA snRNA -3 60 2 430 251 21 70 chr5 150302346 150302432 -52783100 + MER45A DNA AcHobo 89 178 0 1469 169 49 0 chr5 150307577 150307867 -52777665 - AluJb SINE Alu 0 312 11 190 297 125 0 chr5 150308098 150308162 -52777370 - L2 LINE L2 -1 3271 3200 184 222 0 0 chr5 150308244 150308280 -52777252 - L2 LINE L2 -252 3061 3026 1887 140 0 28 chr5 150309115 150309436 -52776096 + AluSx SINE Alu 1 312 0 1456 129 104 14 chr5 150309513 150309585 -52775947 - MER33 DNA MER1_type -2266 319 255 1857 151 3 13 chr5 150309585 150309890 -52775642 + AluJb SINE Alu 1 302 -10 1456 129 104 14 chr5 150309890 150310116 -52775416 - MER33 DNA MER1_type -2330 255 1 2030 115 0 3 chr5 150310522 150310826 -52774706 - AluSg SINE Alu -7 303 1 221 294 140 56 chr5 150310839 150311053 -52774479 - L2 LINE L2 -1 3271 3040 383 165 0 29 chr5 150311661 150311736 -52773796 + A-rich Low_complexity Low_complexity 1 77 -23 2160 97 0 0 chr5 150311736 150312025 -52773507 + AluSg SINE Alu 1 289 -21 743 197 0 29 chr5 150312032 150312169 -52773363 + FLAM_C SINE Alu 1 133 0 383 165 0 29 chr5 150312169 150312188 -52773344 + A-rich Low_complexity Low_complexity 83 100 0 818 194 0 74 chr5 150312203 150312378 -52773154 - AluJo SINE Alu -25 287 126 402 196 130 0 chr5 150312647 150312739 -52772793 + MER53 DNA DNA 2 105 -84 2123 175 44 0 chr5 150313107 150313519 -52772013 + L1MB2 LINE L1 5706 6135 -36 1196 187 123 15 chr5 150313519 150313688 -52771844 - AluJo SINE Alu -3 299 89 228 35 0 0 chr5 150313688 150313717 -52771815 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1196 187 123 15 chr5 150313717 150313815 -52771717 - AluJo SINE Alu -213 89 3 1874 117 35 0 chr5 150313989 150314272 -52771260 - AluSx SINE Alu -19 293 1 982 172 59 151 chr5 150314633 150314878 -52770654 - MER51C LTR ERV1 0 640 427 1604 132 7 90 chr5 150314878 150315188 -52770344 + AluSx SINE Alu 15 298 -14 982 172 59 151 chr5 150315188 150315279 -52770253 - MER51C LTR ERV1 -213 427 329 638 96 0 0 chr5 150315896 150315979 -52769553 - AluS SINE Alu -228 84 2 212 255 29 98 chr5 150316104 150316206 -52769326 + MIR SINE MIR 94 188 -74 1178 151 35 5 chr5 150317018 150317217 -52768315 + AluJb SINE Alu 87 291 -21 392 309 200 22 chr5 150317436 150317711 -52767821 - L3 LINE CR1 -11 1566 1243 1660 194 0 0 chr5 150317865 150318174 -52767358 - AluJb SINE Alu -3 309 1 2210 113 3 0 chr5 150318174 150318485 -52767047 - AluSx SINE Alu 0 312 1 983 182 6 0 chr5 150318499 150318664 -52766868 - FRAM SINE Alu 0 166 1 196 270 64 120 chr5 150319062 150319329 -52766203 + L2 LINE L2 2807 3058 -214 2503 44 0 3 chr5 150320280 150320578 -52764954 - AluY SINE Alu -14 297 1 1699 127 38 48 chr5 150320611 150320902 -52764630 + AluSx SINE Alu 1 288 -24 1774 161 7 0 chr5 150320947 150321239 -52764293 + AluSx SINE Alu 5 298 -14 1332 188 19 49 chr5 150321543 150321851 -52763681 + AluJo SINE Alu 1 299 -13 1810 165 0 16 chr5 150322374 150322689 -52762843 - AluJo SINE Alu 0 312 3 2381 87 0 0 chr5 150322692 150323001 -52762531 - AluSx SINE Alu -1 311 3 1799 150 38 0 chr5 150323065 150323358 -52762174 - AluJo SINE Alu -8 304 1 2216 76 3 3 chr5 150323399 150323690 -52761842 - AluSp SINE Alu -22 291 1 836 152 8 0 chr5 150323982 150324114 -52761418 + FLAM_C SINE Alu 1 133 0 275 188 0 16 chr5 150324118 150324182 -52761350 + GA-rich Low_complexity Low_complexity 3 65 0 2267 100 0 3 chr5 150324187 150324498 -52761034 + AluSq SINE Alu 1 310 -3 2166 90 0 29 chr5 150324498 150324807 -52760725 + AluSc SINE Alu 1 301 -8 199 133 44 0 chr5 150324807 150324852 -52760680 + GA-rich Low_complexity Low_complexity 1 47 0 340 180 109 109 chr5 150324876 150324967 -52760565 + MER5A DNA MER1_type 48 141 -48 288 0 0 0 chr5 150324967 150324999 -52760533 + (TG)n Simple_repeat Simple_repeat 2 33 0 340 180 109 109 chr5 150324999 150325035 -52760497 + MER5A DNA MER1_type 140 175 -14 1971 125 10 0 chr5 150325908 150326205 -52759327 + AluSx SINE Alu 1 300 -12 1978 124 3 0 chr5 150326740 150327046 -52758486 + AluSx SINE Alu 1 307 0 2369 87 0 0 chr5 150327662 150327972 -52757560 + AluSg SINE Alu 1 310 0 890 102 0 0 chr5 150329666 150329784 -52755748 + AluSq/x SINE Alu 1 118 -194 189 0 0 0 chr5 150329803 150329824 -52755708 + (A)n Simple_repeat Simple_repeat 1 21 0 2284 81 3 0 chr5 150331634 150331931 -52753601 + AluSp SINE Alu 1 298 -15 21 0 0 0 chr5 150332493 150332514 -52753018 + AT_rich Low_complexity Low_complexity 1 21 0 292 305 214 5 chr5 150332895 150333081 -52752451 + MIR SINE MIR 19 243 -19 201 39 0 0 chr5 150334076 150334102 -52751430 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 933 143 0 0 chr5 150334328 150334461 -52751071 + AluJ SINE Alu 1 133 -169 1693 81 170 15 chr5 150334471 150334730 -52750802 + AluSg SINE Alu 2 300 0 846 146 51 22 chr5 150334732 150334910 -52750622 + AluJ SINE Alu 129 311 -1 1229 204 79 14 chr5 150335027 150335307 -52750225 - AluJo SINE Alu -14 298 1 807 160 0 0 chr5 150335582 150335707 -52749825 + FLAM_C SINE Alu 1 125 -18 752 160 8 32 chr5 150336026 150336151 -52749381 + FLAM_C SINE Alu 2 123 -20 318 250 167 24 chr5 150336166 150336264 -52749268 - L2 LINE L2 -479 2835 2752 221 0 0 33 chr5 150336264 150336294 -52749238 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 318 250 167 24 chr5 150336294 150336363 -52749169 - L2 LINE L2 -562 2752 2644 1447 116 9 0 chr5 150336601 150336816 -52748716 + AluSg/x SINE Alu 96 312 0 25 0 0 0 chr5 150336901 150336926 -52748606 + AT_rich Low_complexity Low_complexity 1 25 0 1173 167 9 0 chr5 150337328 150337543 -52747989 + AluSg/x SINE Alu 94 310 0 5134 29 5 0 chr5 150337679 150338267 -52747265 + LTR10C LTR ERV1 1 591 0 966 220 82 88 chr5 150338645 150338895 -52746637 - L1MEc LINE L1 -5101 1295 1045 875 119 8 15 chr5 150338895 150339029 -52746503 + FLAM_C SINE Alu 1 133 0 966 220 82 88 chr5 150339029 150339287 -52746245 - L1MEc LINE L1 -5351 1045 790 1001 285 69 31 chr5 150339382 150339863 -52745669 - L1MEc LINE L1 -5861 535 37 2171 94 0 0 chr5 150339937 150340236 -52745296 + AluY SINE Alu 1 299 -12 1140 117 0 0 chr5 150340236 150340399 -52745133 + AluSg/x SINE Alu 134 296 -16 2405 61 0 7 chr5 150340404 150340714 -52744818 + AluY SINE Alu 1 308 -3 1984 101 34 10 chr5 150340725 150341022 -52744510 + AluSx SINE Alu 1 304 -8 2262 93 0 6 chr5 150341023 150341336 -52744196 + AluSq SINE Alu 1 311 -2 768 230 15 35 chr5 150341494 150341694 -52743838 - L1ME2 LINE L1 -105 6059 5864 486 222 37 0 chr5 150341799 150341907 -52743625 + FRAM SINE Alu 52 163 -13 2286 68 0 16 chr5 150341936 150342243 -52743289 + AluY SINE Alu 3 304 -7 1546 180 25 0 chr5 150342489 150342772 -52742760 + AluJo SINE Alu 1 290 -22 2080 104 0 10 chr5 150343098 150343426 -52742106 + AluSx SINE Alu 1 325 0 2154 116 3 3 chr5 150343576 150343886 -52741646 + AluSx SINE Alu 1 310 -2 2063 129 3 0 chr5 150343895 150344198 -52741334 + AluSx SINE Alu 1 304 -8 336 57 0 38 chr5 150344199 150344252 -52741280 + FLAM_A SINE Alu 83 133 0 426 322 44 17 chr5 150344427 150344607 -52740925 - MIR SINE MIR -76 186 2 1554 133 0 0 chr5 150344897 150345122 -52740410 + AluSq SINE Alu 35 259 -54 716 185 0 0 chr5 150345122 150345241 -52740291 + AluJb SINE Alu 148 266 -46 800 171 26 73 chr5 150345405 150345639 -52739893 - AluJo SINE Alu -8 304 82 925 95 0 0 chr5 150346307 150346433 -52739099 + AluSq/x SINE Alu 11 136 -176 2212 62 0 28 chr5 150346433 150346753 -52738779 + AluY SINE Alu 1 311 0 251 270 0 16 chr5 150346926 150346989 -52738543 - MIR SINE MIR -61 147 86 1786 111 35 14 chr5 150347593 150347755 -52737777 - AluSx SINE Alu -18 294 122 2353 67 0 3 chr5 150347755 150348052 -52737480 - AluSx SINE Alu -16 296 1 1786 111 35 14 chr5 150348052 150348177 -52737355 - AluSx SINE Alu -190 122 1 224 30 30 0 chr5 150348571 150348604 -52736928 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6862 53 11 0 chr5 150348604 150349940 -52735592 - L1PA7 LINE L1 -18 6136 4788 5080 191 42 75 chr5 150351329 150351567 -52733965 - L1MC4 LINE L1 0 8042 7798 2180 78 0 0 chr5 150351567 150351879 -52733653 - AluSc SINE Alu 0 312 1 5080 191 42 75 chr5 150351879 150353075 -52732457 - L1MC4 LINE L1 -244 7798 6653 22 35 0 0 chr5 150553780 150553809 -52531723 + AT_rich Low_complexity Low_complexity 1 29 0 532 269 71 38 chr5 150554430 150554642 -52530890 + LTR33A LTR ERVL 213 431 -92 364 320 31 8 chr5 150554800 150554928 -52530604 + L2 LINE L2 3138 3268 -4 812 213 25 0 chr5 150555885 150556045 -52529487 + FRAM SINE Alu 1 156 -20 2691 51 0 0 chr5 150557462 150557773 -52527759 + AluY SINE Alu 1 311 0 7969 76 35 1 chr5 150558021 150559092 -52526440 - L1P3 LINE L1 -4734 1727 620 274 219 86 40 chr5 150559604 150559755 -52525777 + L1ME4a LINE L1 5963 6120 -1 400 298 19 6 chr5 150559816 150559974 -52525558 - MIR3 SINE MIR -11 197 38 276 290 150 43 chr5 150560413 150560620 -52524912 - L3 LINE CR1 -8 1569 1341 994 176 27 5 chr5 150561511 150561699 -52523833 - AluJb SINE Alu -120 192 1 1821 144 4 7 chr5 150561782 150562060 -52523472 + AluSx SINE Alu 5 281 -31 232 253 0 13 chr5 150562375 150562450 -52523082 + GA-rich Low_complexity Low_complexity 3 76 0 269 110 55 14 chr5 150562557 150562630 -52522902 + GA-rich Low_complexity Low_complexity 3 78 0 311 59 0 20 chr5 150562630 150562681 -52522851 + (CAGG)n Simple_repeat Simple_repeat 2 51 0 381 78 300 22 chr5 150562685 150562775 -52522757 + MER5A DNA MER1_type 75 189 0 462 259 13 63 chr5 150562954 150563112 -52522420 - MLT1J LTR MaLR -266 245 96 432 257 37 9 chr5 150563180 150563289 -52522243 - MLT1J LTR MaLR -399 112 1 * 699 159 60 7 chr5 150563289 150563434 -52522098 + MER33 DNA MER1_type 34 186 -138 2261 106 0 13 chr5 150564206 150564508 -52521024 + AluSq SINE Alu 1 298 -15 181 216 0 0 chr5 150565985 150566022 -52519510 - L2 LINE L2 -6 3307 3271 580 256 26 6 chr5 150566149 150566305 -52519227 - MIR SINE MIR -79 183 25 213 108 0 0 chr5 150569891 150569928 -52515604 + (G)n Simple_repeat Simple_repeat 1 37 0 198 0 0 0 chr5 150571662 150571684 -52513848 + (G)n Simple_repeat Simple_repeat 1 22 0 30 27 0 0 chr5 150572234 150572271 -52513261 + AT_rich Low_complexity Low_complexity 1 37 0 784 209 79 60 chr5 150572318 150572389 -52513143 - AluJb SINE Alu -92 220 152 2185 114 0 10 chr5 150572389 150572688 -52512844 - AluSg SINE Alu -14 296 1 784 209 79 60 chr5 150572688 150572831 -52512701 - AluJb SINE Alu -160 152 2 1384 158 108 18 chr5 150572887 150573166 -52512366 - AluJb SINE Alu -8 304 1 38 0 0 0 chr5 150573692 150573730 -52511802 + AT_rich Low_complexity Low_complexity 1 38 0 2282 107 0 3 chr5 150574142 150574442 -52511090 - AluSx SINE Alu -13 299 1 935 104 0 15 chr5 150574447 150574581 -52510951 - AluSc SINE Alu -7 302 171 2251 100 3 0 chr5 150574632 150574923 -52510609 + AluSx SINE Alu 5 296 -16 2428 99 0 6 chr5 150574926 150575240 -52510292 + AluSq SINE Alu 1 312 -1 318 26 0 0 chr5 150575249 150575288 -52510244 + (TG)n Simple_repeat Simple_repeat 2 40 0 2465 73 3 3 chr5 150575768 150576068 -52509464 + AluSp SINE Alu 1 300 -13 1790 134 28 32 chr5 150576372 150576675 -52508857 - AluJb SINE Alu 0 302 1 2358 80 7 0 chr5 150576838 150577127 -52508405 - AluSg SINE Alu -19 291 1 1189 153 13 44 chr5 150577311 150577539 -52507993 - AluJo SINE Alu -6 306 86 219 277 160 0 chr5 150577645 150577739 -52507793 - MIR SINE MIR -62 146 38 2160 114 10 0 chr5 150577832 150578130 -52507402 + AluSq SINE Alu 1 301 -12 2256 121 0 0 chr5 150578240 150578546 -52506986 + AluSx SINE Alu 1 306 -6 1421 162 109 37 chr5 150578806 150578897 -52506635 - MER2 DNA MER2_type 0 344 261 1741 147 34 20 chr5 150578897 150579189 -52506343 + AluJo SINE Alu 1 296 -16 1421 162 109 37 chr5 150579189 150579418 -52506114 - MER2 DNA MER2_type -83 261 1 2302 79 0 16 chr5 150579511 150579814 -52505718 + AluSx SINE Alu 1 298 -14 2344 100 0 7 chr5 150580046 150580346 -52505186 - AluSx SINE Alu -14 298 1 563 276 78 47 chr5 150580869 150581256 -52504276 - L1MC5 LINE L1 -54 7907 7509 227 351 104 7 chr5 150582219 150582373 -52503159 - MIR3 SINE MIR -5 203 35 912 195 45 60 chr5 150582398 150582477 -52503055 + L1MB4 LINE L1 4773 4852 -1294 2079 128 0 0 chr5 150582477 150582789 -52502743 - AluSx SINE Alu 0 312 1 912 195 45 60 chr5 150582789 150582975 -52502557 + L1MB4 LINE L1 4852 5035 -1111 2174 187 11 55 chr5 150582998 150583291 -52502241 + L1MB4 LINE L1 5507 5768 -412 2380 73 0 13 chr5 150583291 150583591 -52501941 + AluSc SINE Alu 1 296 -13 2174 187 11 55 chr5 150583591 150583822 -52501710 + L1MB4 LINE L1 5768 6008 -172 1172 67 0 0 chr5 150584241 150584376 -52501156 + AluSp SINE Alu 1 135 -178 2170 105 0 29 chr5 150584376 150584690 -52500842 + AluSp SINE Alu 1 305 -8 2467 81 3 0 chr5 150586898 150587208 -52498324 - AluY SINE Alu 0 311 1 1188 185 9 18 chr5 150587448 150587670 -52497862 - AluJo SINE Alu -92 220 1 1858 170 3 0 chr5 150587718 150588022 -52497510 + AluJb SINE Alu 1 305 0 1395 140 136 4 chr5 150588313 150588585 -52496947 - MER44D DNA MER2_type -2 607 30 1343 187 216 39 chr5 150588617 150588709 -52496823 + MLT1F LTR MaLR 4 78 -464 1369 181 62 40 chr5 150588709 150589015 -52496517 + AluJo SINE Alu 1 312 0 1343 187 216 39 chr5 150589015 150589373 -52496159 + MLT1F LTR MaLR 78 534 -8 2298 95 0 10 chr5 150589391 150589686 -52495846 + AluSc SINE Alu 1 292 -17 2373 101 0 0 chr5 150589696 150589994 -52495538 + AluSx SINE Alu 1 298 -14 2284 74 11 0 chr5 150590284 150590568 -52494964 + AluSp SINE Alu 16 302 -11 1768 134 20 49 chr5 150590627 150590933 -52494599 + AluJb SINE Alu 11 307 -5 345 34 51 0 chr5 150590933 150590992 -52494540 + (TA)n Simple_repeat Simple_repeat 2 63 0 30 45 0 0 chr5 150590997 150591041 -52494491 + AT_rich Low_complexity Low_complexity 1 44 0 189 374 48 7 chr5 150591104 150591251 -52494281 + MIR3 SINE MIR 21 173 -35 2133 123 10 0 chr5 150591270 150591570 -52493962 - AluSx SINE Alu -9 303 1 620 270 123 50 chr5 150591627 150592009 -52493523 + L2 LINE L2 2162 2571 -743 488 258 14 14 chr5 150592291 150592436 -52493096 - L1ME1 LINE L1 0 6334 6035 2441 76 7 0 chr5 150592531 150592833 -52492699 + AluSp SINE Alu 1 304 -9 559 178 51 8 chr5 150592904 150593022 -52492510 + MER5B DNA MER1_type 6 128 -50 1483 121 52 117 chr5 150593033 150593340 -52492192 - AluJo SINE Alu -25 287 1 688 107 71 9 chr5 150593584 150593696 -52491836 - FLAM_C SINE Alu -18 125 7 487 254 8 0 chr5 150595050 150595184 -52490348 - L1ME2 LINE L1 -10 6154 6020 258 370 36 50 chr5 150595320 150595601 -52489931 + L2 LINE L2 2579 2855 -459 2440 59 7 3 chr5 150596049 150596354 -52489178 - AluY SINE Alu -5 306 1 1908 157 3 0 chr5 150596356 150596650 -52488882 - AluJb SINE Alu -17 295 1 1738 259 128 41 chr5 150596820 150597299 -52488233 + L2 LINE L2 2166 2602 -711 1350 161 6 141 chr5 150597299 150597451 -52488081 + AluJo SINE Alu 1 172 -140 1288 206 6 59 chr5 150597451 150597772 -52487760 + AluJo SINE Alu 5 308 -4 1948 152 3 16 chr5 150597772 150598087 -52487445 + AluSq SINE Alu 1 311 -2 1350 161 6 141 chr5 150598087 150598100 -52487432 + AluJo SINE Alu 171 184 -128 2335 88 0 10 chr5 150598100 150598396 -52487136 + AluY SINE Alu 1 293 -18 1350 161 6 141 chr5 150598396 150598575 -52486957 + AluJo SINE Alu 184 300 -12 1738 259 128 41 chr5 150598575 150598888 -52486644 + L2 LINE L2 2602 3030 -283 297 202 0 128 chr5 150598906 150599015 -52486517 + L2 LINE L2 3146 3240 -73 1998 147 0 7 chr5 150599601 150599908 -52485624 - AluSx SINE Alu -7 305 1 483 194 0 0 chr5 150600127 150600235 -52485297 + CT-rich Low_complexity Low_complexity 3 110 0 1432 121 0 10 chr5 150600382 150600589 -52484943 - AluSg/x SINE Alu -2 310 106 2141 117 0 29 chr5 150600589 150600897 -52484635 + AluSg SINE Alu 1 299 -11 253 250 0 0 chr5 150600975 150601023 -52484509 - AluJ/monomer SINE Alu -252 48 1 402 325 41 25 chr5 150601275 150601472 -52484060 - MIR3 SINE MIR -6 202 3 2308 95 14 0 chr5 150601601 150601897 -52483635 + AluSp SINE Alu 1 300 -13 1090 164 0 6 chr5 150601897 150602068 -52483464 + AluSg/x SINE Alu 132 301 -9 1464 181 24 31 chr5 150602673 150602966 -52482566 - AluJo SINE Alu -21 291 1 2323 96 3 0 chr5 150602994 150603297 -52482235 + AluSp SINE Alu 1 304 -9 336 298 72 69 chr5 150603382 150603435 -52482097 + L1M4 LINE L1 4837 4888 -1258 2221 103 0 10 chr5 150603435 150603735 -52481797 - AluY SINE Alu -14 297 1 225 173 0 96 chr5 150603700 150603752 -52481780 - Alu SINE Alu -132 168 122 * 336 298 72 69 chr5 150603735 150604030 -52481502 + L1M4 LINE L1 4888 5186 -960 276 176 0 0 chr5 150604047 150604098 -52481434 + L1M4 LINE L1 3796 3846 -2300 2257 95 3 0 chr5 150604106 150604390 -52481142 + AluSg SINE Alu 3 287 -23 2059 127 0 48 chr5 150604653 150604854 -52480678 - AluSc SINE Alu -8 301 119 2379 88 0 19 chr5 150604854 150605172 -52480360 - AluSq SINE Alu -1 312 1 2059 127 0 48 chr5 150605172 150605286 -52480246 - AluSc SINE Alu -190 119 1 817 178 0 15 chr5 150605387 150605522 -52480010 - FLAM_C SINE Alu -10 133 1 1603 184 0 26 chr5 150605525 150605835 -52479697 - AluJo SINE Alu -6 306 5 2166 116 0 16 chr5 150605855 150606158 -52479374 + AluSx SINE Alu 1 298 -14 669 62 18 18 chr5 150606350 150606463 -52479069 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 1817 118 67 0 chr5 150606463 150606718 -52478814 - AluSg SINE Alu -38 272 1 612 107 0 0 chr5 150606737 150606821 -52478711 + AluSc SINE Alu 2 85 -224 1981 116 4 11 chr5 150606830 150607105 -52478427 + AluSc SINE Alu 26 298 -11 1678 97 5 0 chr5 150607105 150607321 -52478211 + AluSg/x SINE Alu 81 297 -15 2266 63 31 11 chr5 150607322 150607608 -52477924 + AluY SINE Alu 2 293 -18 1796 150 13 7 chr5 150607861 150608161 -52477371 - AluSx SINE Alu -10 302 1 1976 144 17 0 chr5 150608190 150608489 -52477043 + AluSx SINE Alu 1 304 -8 245 250 55 43 chr5 150608627 150608791 -52476741 - L1MC4a LINE L1 -1826 5982 5817 2480 70 7 0 chr5 150608808 150609110 -52476422 - AluSp SINE Alu -9 304 1 2165 104 10 3 chr5 150609198 150609496 -52476036 - AluSx SINE Alu -12 300 1 2387 62 13 10 chr5 150609507 150609811 -52475721 - AluY SINE Alu -6 305 1 378 208 58 25 chr5 150610388 150610420 -52475112 - MER5C DNA MER1_type -200 124 95 2287 112 0 10 chr5 150610420 150610725 -52474807 - AluSx SINE Alu -10 302 1 378 208 58 25 chr5 150610725 150610812 -52474720 - MER5C DNA MER1_type -229 95 1 2106 113 3 0 chr5 150611096 150611380 -52474152 - AluSg SINE Alu -24 286 2 899 102 0 0 chr5 150611386 150611504 -52474028 - AluSg/x SINE Alu -19 291 174 595 200 0 0 chr5 150611809 150611919 -52473613 + FLAM_A SINE Alu 28 137 -5 2150 104 14 3 chr5 150611929 150612216 -52473316 + AluSc SINE Alu 1 290 -19 523 250 128 0 chr5 150612573 150612729 -52472803 + MIR SINE MIR 41 216 -46 991 156 108 0 chr5 150612760 150612946 -52472586 + MER2 DNA MER2_type 1 206 -139 1246 84 0 0 chr5 150613016 150613170 -52472362 - AluSg/x SINE Alu -25 285 132 401 149 0 45 chr5 150613175 150613242 -52472290 + MER2 DNA MER2_type 280 343 -2 2001 79 32 82 chr5 150614059 150614374 -52471158 + AluSc SINE Alu 1 299 -10 189 0 0 0 chr5 150614745 150614766 -52470766 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 1765 136 10 65 chr5 150614774 150615084 -52470448 + AluJo SINE Alu 1 293 -19 2296 71 0 55 chr5 150616651 150616977 -52468555 + AluSg SINE Alu 1 308 -2 424 78 0 0 chr5 150617366 150617430 -52468102 + Alu SINE Alu 249 312 0 2373 79 6 29 chr5 150617437 150617753 -52467779 + AluSx SINE Alu 1 309 -3 1860 152 0 7 chr5 150617764 150618054 -52467478 + AluJb SINE Alu 1 288 -24 675 144 8 8 chr5 150618109 150618227 -52467305 - ORSL DNA AcHobo -157 118 1 21 36 0 0 chr5 150618429 150618457 -52467075 + AT_rich Low_complexity Low_complexity 1 28 0 533 248 143 34 chr5 150618922 150619029 -52466503 + AluJo SINE Alu 40 134 -178 2270 114 3 0 chr5 150619029 150619327 -52466205 + AluSx SINE Alu 1 299 -13 956 131 0 0 chr5 150619331 150619461 -52466071 + FLAM_C SINE Alu 3 132 -1 533 248 143 34 chr5 150619461 150619586 -52465946 + AluJo SINE Alu 136 303 -9 1481 157 33 65 chr5 150619673 150619835 -52465697 - AluJo SINE Alu -16 296 147 2550 50 0 7 chr5 150619835 150620132 -52465400 - AluY SINE Alu -16 295 1 1481 157 33 65 chr5 150620132 150620275 -52465257 - AluJo SINE Alu -165 147 1 2105 82 0 7 chr5 150620512 150620782 -52464750 - AluSx SINE Alu -44 268 1 1152 123 0 0 chr5 150620821 150620983 -52464549 + AluSg/x SINE Alu 135 296 -14 1751 164 20 7 chr5 150621153 150621313 -52464219 - AluJb SINE Alu -15 297 141 185 0 40 0 chr5 150621313 150621338 -52464194 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2037 127 0 7 chr5 150621338 150621621 -52463911 - AluY SINE Alu -30 281 1 1751 164 20 7 chr5 150621621 150621752 -52463780 - AluJb SINE Alu -170 142 1 507 232 27 116 chr5 150622262 150622590 -52462942 + AluYa5 SINE Alu 2 300 -11 191 241 56 0 chr5 150622891 150622945 -52462587 - L2 LINE L2 -1 3312 3256 2345 96 3 3 chr5 150623642 150623944 -52461588 - AluSg SINE Alu -8 302 1 2442 73 3 0 chr5 150625015 150625326 -52460206 + AluSp SINE Alu 1 312 0 611 157 0 0 chr5 150625362 150625451 -52460081 + AluSq/x SINE Alu 44 132 -181 1359 74 6 0 chr5 150625451 150625614 -52459918 - AluSp SINE Alu -149 164 1 886 185 0 0 chr5 150625878 150626024 -52459508 - FRAM SINE Alu -30 146 1 2212 86 0 4 chr5 150626028 150626306 -52459226 - AluSg SINE Alu -11 299 23 2304 106 0 0 chr5 150626330 150626623 -52458909 - AluSx SINE Alu -17 295 3 2296 91 10 3 chr5 150626625 150626921 -52458611 - AluSq SINE Alu -15 298 1 658 195 0 0 chr5 150626936 150627059 -52458473 - AluJb SINE Alu -189 123 1 912 195 45 60 chr5 150628491 150628570 -52456962 + L1MB4 LINE L1 4773 4852 -1294 2079 128 0 0 chr5 150628570 150628882 -52456650 - AluSx SINE Alu 0 312 1 912 195 45 60 chr5 150628882 150629068 -52456464 + L1MB4 LINE L1 4852 5035 -1111 2711 151 11 48 chr5 150629091 150629383 -52456149 + L1MB4 LINE L1 5507 5773 -407 2380 73 0 13 chr5 150629383 150629683 -52455849 + AluSc SINE Alu 1 296 -13 2711 151 11 48 chr5 150629683 150629913 -52455619 + L1MB4 LINE L1 5773 6010 -170 2222 116 0 3 chr5 150629928 150630222 -52455310 - AluSq SINE Alu -20 293 1 1614 205 10 3 chr5 150630229 150630517 -52455015 - AluJo SINE Alu -22 290 1 1941 132 0 63 chr5 150630725 150631058 -52454474 - AluSx SINE Alu 0 312 1 2307 87 10 10 chr5 150631070 150631369 -52454163 - AluSg1 SINE Alu -10 299 1 2068 74 63 18 chr5 150631402 150631687 -52453845 - AluSg SINE Alu -12 298 1 1697 183 43 3 chr5 150631949 150632249 -52453283 - AluJb SINE Alu 0 312 1 2414 103 0 6 chr5 150634146 150634280 -52451252 + AluSp SINE Alu 1 134 -179 2296 41 45 31 chr5 150634280 150634572 -52450960 + AluY SINE Alu 1 296 -15 2414 103 0 6 chr5 150634572 150634749 -52450783 + AluSp SINE Alu 134 310 -3 379 250 97 110 chr5 150634889 150634990 -52450542 + MIR SINE MIR 33 134 -128 1490 163 48 12 chr5 150634990 150635241 -52450291 + AluJo SINE Alu 1 260 -52 207 0 0 0 chr5 150635242 150635265 -52450267 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2165 114 29 10 chr5 150635272 150635407 -52450125 + AluSx SINE Alu 1 132 -180 2348 93 20 0 chr5 150635407 150635707 -52449825 + AluSg SINE Alu 1 306 -4 2165 114 29 10 chr5 150635707 150635877 -52449655 + AluSx SINE Alu 132 312 0 2266 108 0 13 chr5 150635887 150636202 -52449330 + AluSp SINE Alu 1 311 -2 379 250 97 110 chr5 150636202 150636307 -52449225 + MIR SINE MIR 149 257 -5 2463 59 0 0 chr5 150636413 150636700 -52448832 - AluY SINE Alu -24 287 1 816 141 39 16 chr5 150636701 150636829 -52448703 - AluJo/FLAM SINE Alu -170 132 2 1521 188 0 62 chr5 150637359 150637667 -52447865 + AluJo SINE Alu 1 289 -23 324 145 133 0 chr5 150638128 150638211 -52447321 + L1MB7 LINE L1 6091 6184 0 1660 165 37 17 chr5 150638224 150638521 -52447011 + AluJb SINE Alu 1 303 -9 2228 123 0 3 chr5 150638533 150638835 -52446697 - AluSx SINE Alu -11 301 1 1813 152 10 17 chr5 150638842 150639132 -52446400 - AluJb SINE Alu -24 288 1 368 132 115 40 chr5 150639154 150639196 -52446336 - L1MB3 LINE L1 0 6183 6146 2501 66 0 10 chr5 150639196 150639501 -52446031 - AluY SINE Alu -9 302 1 368 132 115 40 chr5 150639501 150639572 -52445960 - L1MB3 LINE L1 -37 6146 6055 2255 122 0 3 chr5 150639599 150639903 -52445629 - AluSx SINE Alu -9 303 1 23 0 0 0 chr5 150640003 150640026 -52445506 + AT_rich Low_complexity Low_complexity 1 23 0 1987 149 10 3 chr5 150640111 150640419 -52445113 - AluJo SINE Alu 0 312 3 21 71 0 0 chr5 150640570 150640612 -52444920 + AT_rich Low_complexity Low_complexity 1 42 0 2349 98 0 0 chr5 150640612 150640918 -52444614 - AluY SINE Alu -3 308 3 1021 101 0 0 chr5 150640920 150641049 -52444483 - AluSq/x SINE Alu -183 129 1 23 0 0 0 chr5 150641052 150641075 -52444457 + AT_rich Low_complexity Low_complexity 1 23 0 808 104 0 0 chr5 150641075 150641181 -52444351 - U6 snRNA snRNA -1 106 1 2251 96 0 3 chr5 150641416 150641707 -52443825 - AluSg SINE Alu -16 294 5 764 198 0 0 chr5 150642089 150642215 -52443317 - FLAM_A SINE Alu -7 126 1 536 287 36 64 chr5 150642610 150642649 -52442883 - L1ME LINE L1 -361 5809 5770 2290 111 0 0 chr5 150642649 150642966 -52442566 - AluSx SINE Alu 0 312 1 536 287 36 64 chr5 150642966 150643169 -52442363 - L1ME LINE L1 -400 5770 5574 2251 103 10 10 chr5 150643169 150643469 -52442063 - AluSx SINE Alu -12 300 1 536 287 36 64 chr5 150643469 150643592 -52441940 - L1ME LINE L1 -596 5574 5449 297 0 0 0 chr5 150643954 150643987 -52441545 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2092 118 0 0 chr5 150643990 150644269 -52441263 - AluSc SINE Alu -30 279 1 1670 177 24 10 chr5 150644426 150644720 -52440812 + AluJo SINE Alu 1 298 -14 730 173 0 53 chr5 150644751 150644884 -52440648 - AluSq/x SINE Alu -186 127 2 216 86 0 0 chr5 150644956 150644991 -52440541 + (TA)n Simple_repeat Simple_repeat 1 35 0 737 200 0 0 chr5 150645011 150645141 -52440391 - FLAM_A SINE Alu -3 130 1 987 192 12 37 chr5 150645519 150645764 -52439768 - L1MB8 LINE L1 -2 6176 5938 2380 97 3 0 chr5 150645789 150646088 -52439444 - AluSp SINE Alu -13 300 1 1609 152 6 91 chr5 150646399 150646572 -52438960 - AluJo SINE Alu -11 301 115 210 71 0 0 chr5 150646572 150646600 -52438932 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2144 102 3 7 chr5 150646606 150646890 -52438642 - AluSc SINE Alu -26 283 1 1609 152 6 91 chr5 150646890 150647038 -52438494 - AluJo SINE Alu -202 110 1 2519 71 0 0 chr5 150647220 150647530 -52438002 - AluY SINE Alu -1 310 1 1244 152 42 0 chr5 150647814 150647844 -52437688 + AluSg/x SINE Alu 90 117 -193 219 88 0 0 chr5 150647844 150647878 -52437654 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1244 152 42 0 chr5 150647878 150648038 -52437494 + AluSg/x SINE Alu 117 288 -22 236 130 43 0 chr5 150648042 150648088 -52437444 + HsTC2 DNA Tc2 1731 1778 -120 732 167 33 0 chr5 150648090 150648210 -52437322 + FLAM_C SINE Alu 2 125 -18 25 0 0 0 chr5 150648214 150648239 -52437293 + AT_rich Low_complexity Low_complexity 1 25 0 335 154 141 0 chr5 150648282 150648360 -52437172 + HsTC2 DNA Tc2 1791 1879 -19 379 244 25 34 chr5 150648360 150648479 -52437053 - MIR SINE MIR -137 125 8 1777 168 3 19 chr5 150648825 150649134 -52436398 + AluJb SINE Alu 1 304 -8 811 149 21 18 chr5 150649414 150649692 -52435840 + L1MA7 LINE L1 5894 6278 -13 225 0 0 0 chr5 150649738 150649763 -52435769 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 2201 118 3 0 chr5 150649803 150650092 -52435440 - AluSx SINE Alu -14 298 9 1930 135 0 64 chr5 150650108 150650434 -52435098 - AluSx SINE Alu -7 305 1 2196 118 0 13 chr5 150650755 150651069 -52434463 + AluSx SINE Alu 1 310 -2 639 224 8 8 chr5 150651084 150651209 -52434323 + FLAM_C SINE Alu 2 126 -17 21 0 0 0 chr5 150651209 150651230 -52434302 + AT_rich Low_complexity Low_complexity 1 21 0 823 155 0 31 chr5 150651297 150651426 -52434106 + FLAM_C SINE Alu 1 125 -18 1645 82 140 50 chr5 150651465 150651658 -52433874 - AluSx SINE Alu -8 304 77 2596 41 0 0 chr5 150651658 150651948 -52433584 - AluY SINE Alu -21 290 1 1645 82 140 50 chr5 150651948 150652033 -52433499 - AluSx SINE Alu -235 77 1 2218 114 0 3 chr5 150652153 150652451 -52433081 - AluSg SINE Alu -13 297 1 2100 114 3 3 chr5 150652528 150652817 -52432715 - AluY SINE Alu -20 291 3 2760 33 0 0 chr5 150652828 150653132 -52432400 - AluY SINE Alu -7 304 1 657 244 55 79 chr5 150653165 150653493 -52432039 + L2 LINE L2 2994 3313 0 2164 86 0 43 chr5 150653650 150653953 -52431579 + AluSg SINE Alu 1 290 -20 2150 131 0 19 chr5 150654196 150654516 -52431016 + MER1B DNA MER1_type 13 326 -13 25 0 0 0 chr5 150655167 150655192 -52430340 + AT_rich Low_complexity Low_complexity 1 25 0 750 94 0 0 chr5 150655385 150655481 -52430051 + U6 snRNA snRNA 2 97 -10 2077 87 3 7 chr5 150655484 150655770 -52429762 + L1PA8 LINE L1 5888 6172 0 21 0 0 0 chr5 150655780 150655801 -52429731 + AT_rich Low_complexity Low_complexity 1 21 0 2143 114 0 29 chr5 150656081 150656387 -52429145 + AluSg1 SINE Alu 1 297 -12 2233 115 3 10 chr5 150656417 150656721 -52428811 + AluSx SINE Alu 1 302 -10 2141 124 3 0 chr5 150656774 150657072 -52428460 - AluSp SINE Alu -7 306 8 2349 102 0 10 chr5 150657122 150657436 -52428096 + AluSq SINE Alu 1 311 -2 2239 86 14 0 chr5 150657537 150657838 -52427694 + AluSp SINE Alu 1 305 0 398 221 84 11 chr5 150658195 150658290 -52427242 + Tigger3b DNA MER2_type 1 102 -1129 * 4748 124 112 17 chr5 150658284 150658590 -52426942 + Tigger3b DNA MER2_type 269 545 -2483 2207 104 19 16 chr5 150658590 150658899 -52426633 + AluSx SINE Alu 1 310 -2 4748 124 112 17 chr5 150658899 150659002 -52426530 + Tigger3b DNA MER2_type 545 637 -2391 1740 197 0 0 chr5 150659002 150659307 -52426225 + AluSx SINE Alu 3 307 -5 1670 188 14 0 chr5 150659310 150659598 -52425934 + AluJo SINE Alu 1 292 -20 2322 93 3 7 chr5 150659604 150659906 -52425626 + AluSp SINE Alu 1 301 -12 4748 124 112 17 chr5 150659906 150660354 -52425178 + Tigger3b DNA MER2_type 642 1220 -11 2228 126 3 0 chr5 150660521 150660831 -52424701 + AluSx SINE Alu 1 311 -1 2323 98 3 0 chr5 150661185 150661482 -52424050 + AluSc SINE Alu 2 299 -10 1620 210 0 0 chr5 150661491 150661791 -52423741 + AluJb SINE Alu 2 301 -11 559 228 87 0 chr5 150661983 150662110 -52423422 + MER58A DNA MER1_type 2 139 0 906 70 0 9 chr5 150662111 150662226 -52423306 + AluSp SINE Alu 3 116 -197 1773 69 4 101 chr5 150662230 150662506 -52423026 + AluSp SINE Alu 48 296 -17 520 181 53 0 chr5 150662506 150662600 -52422932 + MER58A DNA MER1_type 126 224 0 291 278 152 53 chr5 150662618 150662769 -52422763 + MER5A DNA MER1_type 12 177 -12 1699 161 7 20 chr5 150662772 150663064 -52422468 + AluJb SINE Alu 1 288 -24 1852 148 23 16 chr5 150663084 150663394 -52422138 + AluJb SINE Alu 1 312 0 3322 150 72 40 chr5 150663731 150664208 -52421324 - L1MA7 LINE L1 0 6291 5786 2503 68 3 0 chr5 150664208 150664503 -52421029 + AluSp SINE Alu 2 297 -16 3322 150 72 40 chr5 150664503 150664677 -52420855 - L1MA7 LINE L1 -505 5786 5619 658 195 0 0 chr5 150667841 150667964 -52417568 + AluJb SINE Alu 1 123 -189 2296 91 10 3 chr5 150667979 150668275 -52417257 + AluSq SINE Alu 1 298 -15 2304 106 0 0 chr5 150668277 150668570 -52416962 + AluSx SINE Alu 3 295 -17 2212 86 0 4 chr5 150668594 150668872 -52416660 + AluSg SINE Alu 23 299 -11 886 185 0 0 chr5 150668876 150669022 -52416510 + FRAM SINE Alu 1 146 -30 1344 80 6 0 chr5 150669286 150669449 -52416083 + AluSp SINE Alu 1 164 -149 611 157 0 0 chr5 150669449 150669538 -52415994 - AluSq/x SINE Alu -181 132 44 180 0 0 0 chr5 150669574 150669594 -52415938 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2441 73 3 0 chr5 150669596 150669885 -52415647 - AluSp SINE Alu -23 290 1 232 262 107 0 chr5 150669900 150669984 -52415548 - L1MEd LINE L1 -4862 1257 1165 2353 96 3 3 chr5 150670959 150671262 -52414270 + AluSg SINE Alu 1 303 -7 191 241 56 0 chr5 150671959 150672013 -52413519 + L2 LINE L2 3256 3312 -1 1569 198 27 0 chr5 150672314 150672607 -52412925 - AluJb SINE Alu -11 301 1 1751 164 20 7 chr5 150673116 150673247 -52412285 + AluJb SINE Alu 1 129 -183 2038 127 0 7 chr5 150673247 150673555 -52411977 + AluY SINE Alu 1 306 0 1751 164 20 7 chr5 150673555 150673715 -52411817 + AluJb SINE Alu 129 297 -15 1152 123 0 0 chr5 150673885 150674047 -52411485 - AluSg/x SINE Alu -14 298 137 2105 82 0 7 chr5 150674086 150674356 -52411176 + AluSx SINE Alu 1 268 -44 1481 157 33 65 chr5 150674593 150674736 -52410796 + AluJo SINE Alu 1 147 -165 2550 50 0 7 chr5 150674736 150675033 -52410499 + AluY SINE Alu 1 295 -16 1481 157 33 65 chr5 150675033 150675195 -52410337 + AluJo SINE Alu 147 296 -16 533 248 143 34 chr5 150675282 150675407 -52410125 - AluJo SINE Alu -9 303 193 956 131 0 0 chr5 150675407 150675537 -52409995 - AluJo/FLAM SINE Alu -170 132 3 2270 114 3 0 chr5 150675541 150675839 -52409693 - AluSx SINE Alu -13 299 1 533 248 143 34 chr5 150675839 150675946 -52409586 - AluJo SINE Alu -121 191 40 21 36 0 0 chr5 150676411 150676439 -52409093 + AT_rich Low_complexity Low_complexity 1 28 0 675 144 8 8 chr5 150676641 150676759 -52408773 + ORSL DNA AcHobo 1 118 -157 1860 152 0 7 chr5 150676814 150677104 -52408428 - AluJb SINE Alu -24 288 1 2373 79 6 29 chr5 150677115 150677431 -52408101 - AluSx SINE Alu -3 309 1 424 78 0 0 chr5 150677438 150677502 -52408030 - Alu SINE Alu 0 309 246 2296 71 0 55 chr5 150677891 150678217 -52407315 - AluSg SINE Alu -2 308 1 1765 136 10 65 chr5 150679784 150680094 -52405438 - AluJo SINE Alu -19 293 1 189 0 0 0 chr5 150680102 150680123 -52405409 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 2014 76 32 82 chr5 150680494 150680809 -52404723 - AluSc SINE Alu -10 299 1 401 149 0 45 chr5 150681626 150681693 -52403839 - MER2 DNA MER2_type -2 343 280 1246 84 0 0 chr5 150681698 150681852 -52403680 + AluSg/x SINE Alu 134 287 -25 991 156 108 0 chr5 150681922 150682108 -52403424 - MER2 DNA MER2_type -139 206 1 523 250 128 0 chr5 150682139 150682295 -52403237 - MIR SINE MIR -46 216 41 2150 104 14 3 chr5 150682652 150682939 -52402593 - AluSc SINE Alu -19 290 1 595 200 0 0 chr5 150682949 150683059 -52402473 - FLAM_A SINE Alu -5 137 28 899 102 0 0 chr5 150683364 150683482 -52402050 + AluSg/x SINE Alu 174 291 -19 2106 113 3 0 chr5 150683488 150683772 -52401760 + AluSg SINE Alu 2 286 -24 378 208 58 25 chr5 150684056 150684143 -52401389 + MER5C DNA MER1_type 1 95 -229 2287 112 0 10 chr5 150684143 150684448 -52401084 + AluSx SINE Alu 1 302 -10 378 208 58 25 chr5 150684448 150684480 -52401052 + MER5C DNA MER1_type 95 124 -200 2387 62 13 10 chr5 150685057 150685361 -52400171 + AluY SINE Alu 1 305 -6 2165 104 10 3 chr5 150685372 150685670 -52399862 + AluSx SINE Alu 1 300 -12 2489 69 7 0 chr5 150685758 150686061 -52399471 + AluSp SINE Alu 1 305 -8 1976 144 17 0 chr5 150686380 150686679 -52398853 - AluSx SINE Alu -8 304 1 1796 150 13 7 chr5 150686708 150687008 -52398524 + AluSx SINE Alu 1 302 -10 2266 63 31 11 chr5 150687261 150687547 -52397985 - AluY SINE Alu -18 293 2 1678 97 5 0 chr5 150687548 150687764 -52397768 - AluSg/x SINE Alu -15 297 81 1981 116 4 11 chr5 150687764 150688039 -52397493 - AluSc SINE Alu -11 298 26 614 106 0 0 chr5 150688048 150688133 -52397399 - AluSc SINE Alu -224 85 1 2068 116 32 0 chr5 150688167 150688452 -52397080 + AluSx SINE Alu 1 294 -18 1411 224 78 30 chr5 150688500 150688973 -52396559 - L1ME2 LINE L1 -32 6132 5637 2320 98 0 7 chr5 150688974 150689270 -52396262 - AluSg SINE Alu -16 294 1 25 0 0 0 chr5 150689279 150689304 -52396228 + AT_rich Low_complexity Low_complexity 1 25 0 1537 184 49 3 chr5 150689619 150689907 -52395625 - AluJo SINE Alu -11 301 1 2421 89 0 0 chr5 150690160 150690453 -52395079 + AluSg SINE Alu 1 293 -17 2448 77 0 3 chr5 150691587 150691884 -52393648 - AluSp SINE Alu -17 296 1 1630 160 52 24 chr5 150692295 150692582 -52392950 - AluJb SINE Alu -17 295 1 2358 94 3 19 chr5 150692785 150693103 -52392429 - AluSp SINE Alu 0 313 1 1589 143 50 29 chr5 150693105 150693384 -52392148 - AluSx SINE Alu -12 300 16 2600 54 0 0 chr5 150693384 150693678 -52391854 + AluY SINE Alu 1 295 -16 962 193 0 0 chr5 150693706 150693867 -52391665 - AluJb SINE Alu -18 294 134 1988 105 16 36 chr5 150693867 150694173 -52391359 - AluSx SINE Alu -12 300 1 2259 89 0 54 chr5 150694257 150694572 -52390960 + AluSx SINE Alu 1 298 -14 2284 74 11 0 chr5 150694862 150695146 -52390386 + AluSp SINE Alu 16 302 -11 1785 133 19 49 chr5 150695205 150695513 -52390019 + AluJb SINE Alu 11 309 -3 327 35 53 0 chr5 150695513 150695570 -52389962 + (TA)n Simple_repeat Simple_repeat 2 61 0 30 45 0 0 chr5 150695575 150695619 -52389913 + AT_rich Low_complexity Low_complexity 1 44 0 189 374 48 7 chr5 150695682 150695829 -52389703 + MIR3 SINE MIR 21 173 -35 2133 123 10 0 chr5 150695848 150696148 -52389384 - AluSx SINE Alu -9 303 1 620 270 123 50 chr5 150696205 150696587 -52388945 + L2 LINE L2 2162 2571 -743 488 258 14 14 chr5 150696869 150697014 -52388518 - L1ME1 LINE L1 0 6334 6035 2441 76 7 0 chr5 150697109 150697411 -52388121 + AluSp SINE Alu 1 304 -9 559 178 51 8 chr5 150697482 150697600 -52387932 + MER5B DNA MER1_type 6 128 -50 1483 121 52 117 chr5 150697611 150697918 -52387614 - AluJo SINE Alu -25 287 1 718 108 72 0 chr5 150698162 150698273 -52387259 - FLAM_C SINE Alu -18 125 7 487 254 8 0 chr5 150699627 150699761 -52385771 - L1ME2 LINE L1 -10 6154 6020 258 370 36 50 chr5 150699897 150700178 -52385354 + L2 LINE L2 2579 2855 -459 2440 59 7 3 chr5 150700626 150700931 -52384601 - AluY SINE Alu -5 306 1 1908 157 3 0 chr5 150700933 150701227 -52384305 - AluJb SINE Alu -17 295 1 1738 259 128 41 chr5 150701397 150701876 -52383656 + L2 LINE L2 2166 2602 -711 1350 161 6 141 chr5 150701876 150702028 -52383504 + AluJo SINE Alu 1 172 -140 1288 206 6 59 chr5 150702028 150702349 -52383183 + AluJo SINE Alu 5 308 -4 1948 152 3 16 chr5 150702349 150702664 -52382868 + AluSq SINE Alu 1 311 -2 1350 161 6 141 chr5 150702664 150702677 -52382855 + AluJo SINE Alu 171 184 -128 2335 88 0 10 chr5 150702677 150702973 -52382559 + AluY SINE Alu 1 293 -18 1350 161 6 141 chr5 150702973 150703152 -52382380 + AluJo SINE Alu 184 300 -12 1738 259 128 41 chr5 150703152 150703465 -52382067 + L2 LINE L2 2602 3030 -283 297 202 0 128 chr5 150703483 150703592 -52381940 + L2 LINE L2 3146 3240 -73 1998 147 0 7 chr5 150704178 150704485 -52381047 - AluSx SINE Alu -7 305 1 483 194 0 0 chr5 150704704 150704812 -52380720 + CT-rich Low_complexity Low_complexity 3 110 0 1433 121 0 10 chr5 150704959 150705166 -52380366 - AluSg/x SINE Alu -2 308 104 2141 117 0 29 chr5 150705166 150705474 -52380058 + AluSg SINE Alu 1 299 -11 253 250 0 0 chr5 150705552 150705600 -52379932 - AluJ/monomer SINE Alu -255 48 1 462 325 41 25 chr5 150705852 150706049 -52379483 - MIR3 SINE MIR -6 202 3 2290 95 14 0 chr5 150706178 150706474 -52379058 + AluSp SINE Alu 1 300 -13 1083 164 0 6 chr5 150706474 150706645 -52378887 + AluSg/x SINE Alu 132 301 -9 1451 181 24 31 chr5 150707250 150707543 -52377989 - AluJo SINE Alu -21 291 1 2290 99 3 0 chr5 150707571 150707874 -52377658 + AluSp SINE Alu 1 304 -9 401 276 65 96 chr5 150707910 150708012 -52377520 + L1M4 LINE L1 4801 4905 -1241 2237 100 0 10 chr5 150708012 150708312 -52377220 - AluY SINE Alu -14 297 1 401 276 65 96 chr5 150708312 150708607 -52376925 + L1M4 LINE L1 4905 5186 -960 281 176 0 0 chr5 150708624 150708675 -52376857 + L1M4 LINE L1 3796 3846 -2300 2246 95 3 0 chr5 150708683 150708968 -52376564 + AluSg SINE Alu 3 288 -22 2061 126 0 47 chr5 150709230 150709433 -52376099 - AluSc SINE Alu -6 303 119 2381 85 0 19 chr5 150709433 150709751 -52375781 - AluSq SINE Alu -1 312 1 2061 126 0 47 chr5 150709751 150709865 -52375667 - AluSc SINE Alu -190 119 1 829 187 0 15 chr5 150709966 150710100 -52375432 - FLAM_C SINE Alu -10 133 2 1603 184 0 26 chr5 150710104 150710414 -52375118 - AluJo SINE Alu -6 306 5 2129 119 0 16 chr5 150710434 150710737 -52374795 + AluSx SINE Alu 1 298 -14 669 62 18 18 chr5 150710929 150711042 -52374490 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 1796 118 67 0 chr5 150711042 150711297 -52374235 - AluSg SINE Alu -38 272 1 2296 85 0 33 chr5 150711315 150711621 -52373911 + AluY SINE Alu 1 296 -15 2227 104 0 3 chr5 150711853 150712140 -52373392 + AluSq SINE Alu 1 286 -27 1975 142 7 0 chr5 150712146 150712434 -52373098 + AluSc SINE Alu 1 290 -19 267 143 0 0 chr5 150712459 150712501 -52373031 + Alu SINE Alu 1 42 -257 1421 143 0 10 chr5 150712501 150712710 -52372822 - AluSx SINE Alu -105 207 1 1796 167 7 0 chr5 150712716 150713004 -52372528 - AluSq SINE Alu -23 290 1 637 218 8 16 chr5 150713015 150713139 -52372393 - FLAM_A SINE Alu -10 123 1 2616 187 33 16 chr5 150713847 150714392 -52371140 - L1MB4 LINE L1 0 6180 5627 1405 189 69 10 chr5 150714593 150714749 -52370783 - AluJo SINE Alu -4 308 163 1542 146 127 7 chr5 150714749 150715024 -52370508 - AluSx SINE Alu -4 308 1 1405 189 69 10 chr5 150715024 150715158 -52370374 - AluJo SINE Alu -149 163 1 1624 118 4 9 chr5 150715343 150715572 -52369960 - AluSg SINE Alu -39 271 44 935 129 0 8 chr5 150715572 150715696 -52369836 - AluSg SINE Alu -185 125 1 2212 176 44 37 chr5 150715793 150716014 -52369518 - Tigger2a DNA MER2_type -2274 434 207 2180 104 7 13 chr5 150716014 150716312 -52369220 + AluSc SINE Alu 1 296 -13 2212 176 44 37 chr5 150716312 150716521 -52369011 - Tigger2a DNA MER2_type -2501 207 1 2337 88 7 3 chr5 150716539 150716835 -52368697 + AluSg SINE Alu 1 297 -13 2193 81 7 27 chr5 150716835 150717130 -52368402 + AluY SINE Alu 1 289 -22 1850 162 10 0 chr5 150717925 150718222 -52367310 - AluJb SINE Alu -12 300 1 401 283 21 37 chr5 150718234 150718425 -52367107 + L2 LINE L2 3085 3272 -41 2352 104 0 0 chr5 150718469 150718778 -52366754 - AluSx SINE Alu -3 309 1 216 86 0 0 chr5 150718780 150718815 -52366717 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 2129 122 0 0 chr5 150718815 150719101 -52366431 - AluSq SINE Alu -27 286 1 2214 115 0 0 chr5 150719103 150719398 -52366134 - AluSx SINE Alu -17 295 1 1542 186 74 0 chr5 150719425 150719694 -52365838 - AluJo SINE Alu -23 289 1 1836 141 40 0 chr5 150719722 150719999 -52365533 + AluSx SINE Alu 2 289 -23 435 38 0 0 chr5 150720003 150720056 -52365476 + (TG)n Simple_repeat Simple_repeat 2 54 0 313 311 0 0 chr5 150720056 150720146 -52365386 + L1MC4 LINE L1 6614 6703 -1339 202 143 34 84 chr5 150720151 150720192 -52365340 + (TTATA)n Simple_repeat Simple_repeat 2 44 -70 1904 141 7 7 chr5 150720192 150720517 -52365015 + AluSq SINE Alu 1 325 0 202 143 34 84 chr5 150720517 150720593 -52364939 + (TTATA)n Simple_repeat Simple_repeat 44 114 0 1497 183 48 14 chr5 150720662 150720951 -52364581 + AluJo SINE Alu 1 299 -3 1119 201 14 9 chr5 150722138 150722357 -52363175 + AluJo SINE Alu 1 220 -92 364 39 0 58 chr5 150722357 150722409 -52363123 + AluSc SINE Alu 84 132 -167 1684 136 0 109 chr5 150722424 150722762 -52362770 - AluJb SINE Alu -10 302 2 1913 137 11 14 chr5 150723151 150723466 -52362066 - AluSx SINE Alu 0 314 1 1530 174 18 14 chr5 150723466 150723748 -52361784 - AluSq SINE Alu 0 313 31 2052 103 3 55 chr5 150723764 150724074 -52361458 + AluSc SINE Alu 1 294 -15 2435 94 0 0 chr5 150724089 150724396 -52361136 - AluSc SINE Alu -2 307 1 1467 193 13 86 chr5 150724396 150724471 -52361061 - L1MB7 LINE L1 -67 6117 6038 2361 85 0 19 chr5 150724471 150724787 -52360745 - AluSg SINE Alu 0 310 1 2124 121 3 0 chr5 150724787 150725084 -52360448 - AluSp SINE Alu -15 298 1 885 158 0 0 chr5 150725087 150725220 -52360312 - AluJo/FLAM SINE Alu -169 133 1 1467 193 13 86 chr5 150725220 150725512 -52360020 - L1MB7 LINE L1 -147 6037 5772 1132 133 84 61 chr5 150726979 150727083 -52358449 + L1MA9 LINE L1 6038 6138 -174 2396 90 0 0 chr5 150727083 150727384 -52358148 - AluSx SINE Alu -11 301 1 1132 133 84 61 chr5 150727384 150727542 -52357990 + L1MA9 LINE L1 6138 6306 -6 224 320 91 9 chr5 150727640 150727776 -52357756 - MIR3 SINE MIR -64 144 8 2051 110 0 7 chr5 150727798 150728079 -52357453 + AluSg SINE Alu 1 279 -31 234 0 0 0 chr5 150728134 150728160 -52357372 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1507 198 0 26 chr5 150728166 150728469 -52357063 - AluJb SINE Alu -17 295 1 384 250 19 10 chr5 150728540 150728644 -52356888 + MER103 DNA DNA 2 106 -60 432 195 171 93 chr5 150728832 150728963 -52356569 + MER112 DNA MER1_type 39 193 -67 1407 163 47 106 chr5 150728963 150729283 -52356249 + AluJo SINE Alu 1 301 -1 432 195 171 93 chr5 150729283 150729356 -52356176 + MER112 DNA MER1_type 193 259 -1 649 155 21 0 chr5 150729372 150729469 -52356063 - FRAM SINE Alu -19 157 59 1186 65 0 0 chr5 150729961 150730100 -52355432 + AluY SINE Alu 155 293 -18 186 171 0 0 chr5 150731666 150731707 -52353825 + T-rich Low_complexity Low_complexity 3 43 0 2256 92 0 7 chr5 150732069 150732364 -52353168 - AluSx SINE Alu -19 293 1 1895 68 0 4 chr5 150732587 150732822 -52352710 + AluY SINE Alu 63 296 -15 462 331 112 64 chr5 150733021 150733143 -52352389 + L3 LINE CR1 1070 1185 -392 1930 144 3 0 chr5 150733143 150733463 -52352069 + AluSx SINE Alu 1 321 0 462 331 112 64 chr5 150733463 150733823 -52351709 + L3 LINE CR1 1185 1576 -1 234 254 0 30 chr5 150734004 150734071 -52351461 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 1613 199 0 7 chr5 150734120 150734421 -52351111 + AluJb SINE Alu 1 299 -13 2123 116 38 0 chr5 150734659 150734952 -52350580 - AluSx SINE Alu -8 304 1 3751 194 32 22 chr5 150734952 150735737 -52349795 - L1M4c LINE L1 -5589 795 3 309 263 0 26 chr5 150735737 150735813 -52349719 + L2 LINE L2 3239 3312 -1 620 255 60 0 chr5 150735814 150735998 -52349534 - L2 LINE L2 -747 2567 2373 252 0 0 0 chr5 150736452 150736480 -52349052 + (T)n Simple_repeat Simple_repeat 1 28 0 983 194 76 17 chr5 150736523 150736760 -52348772 + 7SLRNA srpRNA srpRNA 70 320 0 826 177 0 8 chr5 150736837 150736967 -52348565 + FLAM_C SINE Alu 5 133 0 2199 117 7 0 chr5 150737820 150738119 -52347413 + AluSx SINE Alu 1 301 -11 2402 64 6 52 chr5 150738119 150738447 -52347085 + AluSp SINE Alu 1 313 0 816 281 242 21 chr5 150738500 150738984 -52346548 - MLT1G1 LTR MaLR 0 595 5 2366 86 3 0 chr5 150739064 150739365 -52346167 - AluSp SINE Alu -11 302 1 1685 170 42 52 chr5 150739375 150739428 -52346104 - L1MB4 LINE L1 0 6180 6128 1876 137 0 49 chr5 150739428 150739756 -52345776 - AluSx SINE Alu 0 312 1 1685 170 42 52 chr5 150739756 150740107 -52345425 - L1MB4 LINE L1 -52 6128 5780 1458 146 56 24 chr5 150740129 150740417 -52345115 - MER2 DNA MER2_type -47 298 2 728 139 9 0 chr5 150740570 150740678 -52344854 - FLAM_A SINE Alu -12 130 22 2193 122 0 3 chr5 150740709 150741012 -52344520 + AluSq SINE Alu 1 302 -11 919 157 0 15 chr5 150741019 150741153 -52344379 + FLAM_A SINE Alu 2 133 0 864 204 60 88 chr5 150741158 150741208 -52344324 - L1ME2 LINE L1 -135 6029 5979 2151 122 0 0 chr5 150741208 150741502 -52344030 - AluSx SINE Alu -18 294 1 864 204 60 88 chr5 150741502 150741769 -52343763 - L1ME2 LINE L1 -185 5979 5721 1387 230 58 54 chr5 150741794 150741922 -52343610 - L1MD2 LINE L1 -271 6088 5962 2001 127 3 0 chr5 150741922 150742229 -52343303 - AluSp SINE Alu 0 308 1 1387 230 58 54 chr5 150742229 150742256 -52343276 - L1MD2 LINE L1 -397 5962 5937 1468 150 84 52 chr5 150742256 150742543 -52342989 + AluJo SINE Alu 1 296 -16 1387 230 58 54 chr5 150742543 150742644 -52342888 - L1MD2 LINE L1 -422 5937 5838 1529 188 13 26 chr5 150742644 150742953 -52342579 - AluJb SINE Alu -7 305 1 1387 230 58 54 chr5 150742953 150743175 -52342357 - L1MD2 LINE L1 -521 5838 5605 * 1587 243 91 75 chr5 150743166 150743406 -52342126 - L1ME LINE L1 -4844 1236 1001 2238 126 10 0 chr5 150743406 150743715 -52341817 - AluSp SINE Alu -1 312 1 1587 243 91 75 chr5 150743715 150744243 -52341289 - L1ME LINE L1 -5079 1001 482 2128 109 7 7 chr5 150744243 150744546 -52340986 - AluSx SINE Alu -9 303 1 1587 243 91 75 chr5 150744546 150745028 -52340504 - L1ME LINE L1 -5598 482 9 255 208 42 69 chr5 150745079 150745151 -52340381 - MLT1L LTR MaLR -375 240 171 1458 169 86 29 chr5 150745165 150745444 -52340088 - AluJb SINE Alu 0 312 18 1061 226 41 8 chr5 150745445 150745688 -52339844 + Charlie1b DNA MER1_type 20 270 -253 1188 171 38 5 chr5 150745688 150745899 -52339633 - AluJb SINE Alu -10 302 85 29 28 0 0 chr5 150745997 150746033 -52339499 + AT_rich Low_complexity Low_complexity 1 36 0 2125 110 10 0 chr5 150746426 150746718 -52338814 - AluSg SINE Alu -15 295 1 436 128 59 182 chr5 150746727 150746771 -52338761 + Charlie1b DNA MER1_type 360 408 -2353 2186 121 3 13 chr5 150746771 150747084 -52338448 - AluSq SINE Alu -3 310 1 436 128 59 182 chr5 150747084 150747189 -52338343 + Charlie1b DNA MER1_type 408 484 -2277 2070 117 28 0 chr5 150747189 150747479 -52338053 + AluSq SINE Alu 1 298 -15 436 128 59 182 chr5 150747479 150747515 -52338017 + Charlie1b DNA MER1_type 484 523 0 311 271 13 80 chr5 150747515 150747664 -52337868 - MLT1L LTR MaLR -460 155 17 376 170 189 119 chr5 150748201 150748306 -52337226 - MER5A DNA MER1_type 0 189 68 1676 102 158 34 chr5 150748306 150748572 -52336960 - AluSg SINE Alu -1 299 1 376 170 189 119 chr5 150748572 150748625 -52336907 - MER5A DNA MER1_type -121 68 20 2453 107 63 9 chr5 150749467 150749814 -52335718 - MER47A DNA MER2_type 0 366 1 383 291 57 7 chr5 150750234 150750375 -52335157 - MIR SINE MIR -47 215 68 300 241 78 131 chr5 150750403 150750594 -52334938 - MER58C DNA MER1_type -1 214 34 2226 102 0 25 chr5 150750613 150750927 -52334605 - AluY SINE Alu -5 306 1 2311 81 3 19 chr5 150750979 150751287 -52334245 + AluSp SINE Alu 1 303 -10 788 174 8 8 chr5 150751332 150751464 -52334068 - FLAM_C SINE Alu -10 133 2 2066 118 0 16 chr5 150751592 150751896 -52333636 - AluSq SINE Alu -14 299 1 2382 103 0 0 chr5 150751976 150752288 -52333244 + AluSx SINE Alu 1 312 0 268 229 6 127 chr5 150753226 150753312 -52332220 - MER103 DNA DNA -19 147 89 2053 131 0 3 chr5 150753312 150753617 -52331915 - AluSx SINE Alu -8 304 1 268 229 6 127 chr5 150753617 150753696 -52331836 - MER103 DNA DNA -77 89 2 210 333 95 0 chr5 150753729 150753855 -52331677 - MIR3 SINE MIR -29 179 42 2005 124 0 4 chr5 150753915 150754190 -52331342 - AluSx SINE Alu -38 274 1 2279 95 0 10 chr5 150754200 150754495 -52331037 - AluSc SINE Alu -17 292 1 1335 188 216 39 chr5 150754513 150754871 -52330661 - MLT1F LTR MaLR -8 534 78 1384 174 62 40 chr5 150754871 150755177 -52330355 - AluJb SINE Alu 0 312 1 1335 188 216 39 chr5 150755177 150755269 -52330263 - MLT1F LTR MaLR -464 78 4 1414 140 136 4 chr5 150755301 150755573 -52329959 + MER44D DNA MER2_type 30 607 -2 180 0 0 0 chr5 150755864 150755884 -52329648 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1839 170 3 0 chr5 150755886 150756168 -52329364 - AluJb SINE Alu -29 283 1 1219 184 5 18 chr5 150756216 150756439 -52329093 + AluJo SINE Alu 1 220 -92 2451 81 3 0 chr5 150756679 150756989 -52328543 + AluY SINE Alu 1 311 0 2152 105 0 29 chr5 150759201 150759515 -52326017 - AluSp SINE Alu -8 305 1 1163 67 0 0 chr5 150759515 150759650 -52325882 - AluSp SINE Alu -178 135 1 2344 89 0 3 chr5 150759676 150759980 -52325552 + AluSp SINE Alu 1 303 -10 198 0 0 0 chr5 150759992 150760014 -52325518 + (GA)n Simple_repeat Simple_repeat 1 22 0 1485 186 14 17 chr5 150760796 150761091 -52324441 - AluJo SINE Alu -18 294 1 195 42 0 0 chr5 150761164 150761188 -52324344 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2195 96 0 4 chr5 150761195 150761476 -52324056 - AluSg SINE Alu -30 280 1 1251 144 0 5 chr5 150761649 150761836 -52323696 - AluSg/x SINE Alu -42 270 85 269 156 31 16 chr5 150761917 150761981 -52323551 - L1MB3 LINE L1 -8 6175 6111 374 167 0 28 chr5 150761997 150762069 -52323463 + L1M4 LINE L1 2964 3033 -3113 2064 142 0 13 chr5 150762111 150762290 -52323242 - AluSx SINE Alu -1 311 136 2483 62 0 16 chr5 150762290 150762598 -52322934 - AluY SINE Alu -8 303 1 2064 142 0 13 chr5 150762598 150762729 -52322803 - AluSx SINE Alu -176 136 5 2121 98 0 74 chr5 150762786 150763111 -52322421 - AluSc SINE Alu -8 301 1 491 239 39 33 chr5 150763117 150763143 -52322389 - L1M4c LINE L1 -4155 2229 2205 1953 123 48 0 chr5 150763143 150763435 -52322097 - AluSx SINE Alu -6 306 1 491 239 39 33 chr5 150763435 150763588 -52321944 - L1M4c LINE L1 -4179 2205 2049 1193 185 19 50 chr5 150763598 150763858 -52321674 - AluJo SINE Alu -23 289 38 1509 174 94 4 chr5 150763868 150764133 -52321399 - AluJb SINE Alu -23 289 1 834 188 143 15 chr5 150764141 150764411 -52321121 - L1M4c LINE L1 -4335 2049 1655 2033 100 75 4 chr5 150764414 150764694 -52320838 - AluSc SINE Alu -8 301 2 2114 91 47 0 chr5 150765567 150765864 -52319668 + AluSq SINE Alu 1 311 -2 195 167 0 0 chr5 150766689 150766731 -52318801 + (TCTCTG)n Simple_repeat Simple_repeat 4 45 0 209 314 122 62 chr5 150766942 150767295 -52318237 + L2 LINE L2 2160 2533 -781 2027 230 84 43 chr5 150768322 150768519 -52317013 - L1ME3A LINE L1 -9 6161 5973 2331 107 0 0 chr5 150768519 150768829 -52316703 - AluSg SINE Alu 0 310 1 2027 230 84 43 chr5 150768829 150769297 -52316235 - L1ME3A LINE L1 -197 5973 5469 200 148 16 49 chr5 150769820 150769881 -52315651 + T-rich Low_complexity Low_complexity 2 60 0 317 154 0 0 chr5 150770934 150770986 -52314546 + Alu SINE Alu 1 52 -256 2330 82 3 7 chr5 150771757 150772062 -52313470 + AluSp SINE Alu 1 304 -9 2183 82 0 35 chr5 150772133 150772448 -52313084 - AluSc SINE Alu -5 304 1 2193 113 0 3 chr5 150772515 150772817 -52312715 - AluY SINE Alu -10 301 1 1984 104 3 95 chr5 150773203 150773540 -52311992 - AluSx SINE Alu -6 306 1 28 0 0 0 chr5 150774029 150774057 -52311475 + AT_rich Low_complexity Low_complexity 1 28 0 1987 119 18 0 chr5 150774991 150775121 -52310411 + AluSx SINE Alu 1 127 -185 2124 119 7 3 chr5 150775121 150775414 -52310118 + AluSg SINE Alu 1 294 -16 1987 119 18 0 chr5 150775414 150775568 -52309964 + AluSx SINE Alu 127 290 -22 1981 137 23 7 chr5 150775724 150776023 -52309509 + AluSx SINE Alu 1 304 -8 1682 159 43 23 chr5 150776039 150776341 -52309191 - AluJo SINE Alu -2 310 3 244 157 148 52 chr5 150776396 150776511 -52309021 - Charlie1 DNA MER1_type -170 2591 2466 2222 106 10 3 chr5 150776525 150776826 -52308706 - AluSq SINE Alu -7 306 4 2273 111 0 0 chr5 150776892 150777198 -52308334 - AluSg SINE Alu -4 306 1 514 193 37 134 chr5 150777302 150777331 -52308201 + MIR SINE MIR 88 118 -144 2320 101 3 0 chr5 150777331 150777629 -52307903 - AluSp SINE Alu -14 299 1 514 193 37 134 chr5 150777629 150777786 -52307746 + MIR SINE MIR 118 256 -6 1805 164 76 48 chr5 150777835 150778189 -52307343 + MLT1A1 LTR MaLR 1 364 -1 874 147 0 22 chr5 150778321 150778457 -52307075 + FLAM_C SINE Alu 1 133 0 1708 115 115 7 chr5 150778745 150779014 -52306518 + AluSx SINE Alu 1 298 -14 858 226 0 0 chr5 150779021 150779167 -52306365 + AluJo SINE Alu 3 148 -164 1934 132 31 3 chr5 150779283 150779572 -52305960 + AluJb SINE Alu 1 297 -15 295 237 41 7 chr5 150779752 150779838 -52305694 - MIR SINE MIR -105 103 18 2122 115 13 26 chr5 150780048 150780352 -52305180 - AluSx SINE Alu -12 300 1 2198 105 3 3 chr5 150780383 150780687 -52304845 + AluSc SINE Alu 1 304 -5 826 238 0 0 chr5 150780743 150780894 -52304638 - FRAM SINE Alu -14 152 2 1502 203 7 14 chr5 150780903 150781189 -52304343 - AluJo SINE Alu -25 287 4 1155 241 70 19 chr5 150781192 150781462 -52304070 - MER77 LTR ERV1 -268 337 54 2050 118 17 0 chr5 150781664 150781951 -52303581 + AluSx SINE Alu 1 292 -20 267 181 14 111 chr5 150782108 150782180 -52303352 - MLT1I LTR MaLR -277 132 68 235 341 54 36 chr5 150782271 150782438 -52303094 + L3 LINE CR1 1270 1439 -138 2150 110 0 17 chr5 150782564 150782865 -52302667 + AluSx SINE Alu 1 296 -16 1931 138 17 0 chr5 150783342 150783633 -52301899 - AluSx SINE Alu -16 296 1 813 176 44 0 chr5 150783784 150783920 -52301612 - AluJb SINE Alu -6 306 165 2043 109 21 7 chr5 150783928 150784211 -52301321 - AluSx SINE Alu -25 287 1 309 311 115 7 chr5 150784234 150784382 -52301150 - MIR SINE MIR -64 198 35 1572 188 37 34 chr5 150784690 150784988 -52300544 - AluJo SINE Alu -1 301 3 268 182 182 127 chr5 150785044 150785084 -52300448 - MER77 LTR ERV1 -258 347 311 2335 92 7 0 chr5 150785084 150785390 -52300142 - AluSg SINE Alu 0 310 3 268 182 182 127 chr5 150785390 150785459 -52300073 - MER77 LTR ERV1 -294 311 232 2371 96 0 0 chr5 150787647 150787950 -52297582 - AluSg SINE Alu -7 303 1 1736 131 37 20 chr5 150788062 150788359 -52297173 - AluSq SINE Alu -11 302 1 2138 79 4 0 chr5 150788387 150788664 -52296868 + AluY SINE Alu 1 278 -33 225 0 0 0 chr5 150788666 150788691 -52296841 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2212 82 30 33 chr5 150788732 150789037 -52296495 + AluSp SINE Alu 2 305 -8 2308 82 17 0 chr5 150789037 150789330 -52296202 + AluSp SINE Alu 1 299 -14 2224 100 3 0 chr5 150789332 150789622 -52295910 + AluSg SINE Alu 1 291 -19 2302 110 0 0 chr5 150790004 150790314 -52295218 - AluSx SINE Alu -2 310 1 241 272 0 37 chr5 150790341 150790422 -52295110 + MIR SINE MIR 181 258 -4 2297 94 10 0 chr5 150790504 150790803 -52294729 - AluSp SINE Alu -11 302 1 2151 117 0 13 chr5 150790833 150791133 -52294399 - AluSq SINE Alu -17 296 1 218 31 0 31 chr5 150791265 150791294 -52294238 + (CA)n Simple_repeat Simple_repeat 1 59 0 218 31 0 31 chr5 150791294 150791326 -52294206 + (CA)n Simple_repeat Simple_repeat 2 32 0 369 0 0 0 chr5 150791351 150791392 -52294140 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 901 145 0 0 chr5 150791449 150791580 -52293952 - AluSq/x SINE Alu -177 135 5 979 130 47 52 chr5 150791798 150791990 -52293542 + MER20 DNA MER1_type 29 219 0 313 245 224 0 chr5 150792051 150792198 -52293334 + MIR SINE MIR 70 249 -13 2282 86 3 0 chr5 150792306 150792596 -52292936 - AluY SINE Alu -20 291 1 1049 93 0 0 chr5 150793111 150793240 -52292292 + AluSp SINE Alu 1 129 -184 2492 72 0 0 chr5 150793242 150793548 -52291984 + AluY SINE Alu 3 308 -3 1464 71 6 0 chr5 150793555 150793737 -52291795 + AluSp SINE Alu 120 302 -11 647 148 102 62 chr5 150793891 150794019 -52291513 - FLAM_A SINE Alu 0 133 1 2227 95 3 0 chr5 150794157 150794441 -52291091 + AluSg SINE Alu 1 285 -25 280 31 0 0 chr5 150794635 150794667 -52290865 - U2 snRNA snRNA -153 35 4 2140 91 29 0 chr5 150796723 150797040 -52288492 + AluSx SINE Alu 1 325 0 25 0 0 0 chr5 150797604 150797629 -52287903 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr5 150799210 150799274 -52286258 + AT_rich Low_complexity Low_complexity 1 64 0 1148 134 0 43 chr5 150800191 150800378 -52285154 - AluJo/FRAM SINE Alu -5 307 129 1532 117 21 0 chr5 150800380 150800620 -52284912 - AluSg/x SINE Alu -1 309 65 1975 114 0 0 chr5 150800621 150800885 -52284647 + AluSg1 SINE Alu 1 264 -45 1416 152 78 31 chr5 150801040 150801296 -52284236 - AluJo SINE Alu -22 290 23 1414 173 0 89 chr5 150801309 150801633 -52283899 - AluJo SINE Alu -12 300 6 961 198 0 0 chr5 150801942 150802099 -52283433 - AluJ SINE Alu -27 285 129 204 217 0 0 chr5 150802102 150802148 -52283384 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 1683 120 12 4 chr5 150802149 150802399 -52283133 - AluSg SINE Alu -15 295 44 832 176 8 8 chr5 150802402 150802533 -52282999 - AluJ SINE Alu -180 132 2 2432 73 7 0 chr5 150802869 150803169 -52282363 + AluY SINE Alu 1 302 -9 24 67 0 0 chr5 150803819 150803864 -52281668 + AT_rich Low_complexity Low_complexity 1 45 0 921 178 7 0 chr5 150804033 150804179 -52281353 + FRAM SINE Alu 1 140 -36 2522 87 0 0 chr5 150804184 150804496 -52281036 - AluSx SINE Alu 0 312 1 258 139 0 0 chr5 150804641 150804709 -52280823 + Alu SINE Alu 246 313 0 1570 179 32 21 chr5 150805160 150805445 -52280087 + AluJb SINE Alu 1 288 -24 187 316 249 37 chr5 150805560 150806045 -52279487 - L2 LINE L2 -337 2977 2390 181 0 0 0 chr5 150806295 150806315 -52279217 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2348 72 3 0 chr5 150806315 150806606 -52278926 - AluY SINE Alu -19 292 1 2486 68 0 7 chr5 150806758 150807068 -52278464 + AluY SINE Alu 1 308 -3 2576 61 0 0 chr5 150807319 150807614 -52277918 + AluSc SINE Alu 1 295 -14 1866 165 13 3 chr5 150807642 150807945 -52277587 - AluJb SINE Alu -6 306 1 2351 104 0 7 chr5 150808028 150808335 -52277197 + AluSx SINE Alu 5 309 -3 279 169 26 52 chr5 150808491 150808568 -52276964 - L1MC5 LINE L1 -51 7910 7836 408 239 39 51 chr5 150808633 150808762 -52276770 - L1MC5 LINE L1 -128 7833 7707 2324 98 3 0 chr5 150808762 150809058 -52276474 - AluSg SINE Alu -13 297 1 408 239 39 51 chr5 150809058 150809162 -52276370 - L1MC5 LINE L1 -254 7707 7603 2170 92 3 10 chr5 150809180 150809508 -52276024 - AluSg SINE Alu 0 310 1 1940 214 96 29 chr5 150809582 150809628 -52275904 - L1M4 LINE L1 -1214 4932 4891 2237 110 0 0 chr5 150809628 150809920 -52275612 - AluY SINE Alu -13 298 7 1940 214 96 29 chr5 150809920 150810527 -52275005 - L1M4 LINE L1 -1255 4891 4235 22 0 0 0 chr5 150810527 150810549 -52274983 + AT_rich Low_complexity Low_complexity 1 22 0 2386 101 3 0 chr5 150810549 150810857 -52274675 + AluSp SINE Alu 1 309 -4 882 97 7 41 chr5 150810863 150810900 -52274632 - L1MA1 LINE L1 -15 6287 6250 1973 128 0 47 chr5 150810900 150811002 -52274530 - AluSx SINE Alu -8 304 199 1903 135 24 17 chr5 150811002 150811299 -52274233 - AluSx SINE Alu -13 299 1 1973 128 0 47 chr5 150811299 150811515 -52274017 - AluSx SINE Alu -113 199 1 882 97 7 41 chr5 150811515 150811622 -52273910 - L1MA1 LINE L1 -52 6250 6148 2481 78 3 3 chr5 150811622 150811928 -52273604 - AluSp SINE Alu -7 306 1 318 199 41 128 chr5 150811942 150812102 -52273430 - L1MC5 LINE L1 -992 6969 6827 198 71 0 0 chr5 150812102 150812130 -52273402 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 318 199 41 128 chr5 150812130 150812165 -52273367 - L1MC5 LINE L1 -1134 6827 6791 496 173 36 16 chr5 150812408 150812634 -52272898 + AluJ SINE Alu 15 296 -16 2413 88 3 7 chr5 150812731 150813038 -52272494 + AluSq SINE Alu 1 306 -7 321 328 156 5 chr5 150813517 150813709 -52271823 - MIR SINE MIR 0 262 42 328 189 116 0 chr5 150814211 150814306 -52271226 + MER53 DNA DNA 84 189 0 24 0 0 0 chr5 150814677 150814701 -52270831 + GC_rich Low_complexity Low_complexity 1 24 0 445 284 93 38 chr5 150815229 150815465 -52270067 - MIR SINE MIR -7 255 7 546 268 27 107 chr5 150815785 150815852 -52269680 - MIR SINE MIR -21 241 170 876 179 19 12 chr5 150815852 150816014 -52269518 - FRAM SINE Alu -2 164 2 2370 92 0 0 chr5 150816023 150816326 -52269206 - AluSx SINE Alu -9 303 1 546 268 27 107 chr5 150816326 150816509 -52269023 - MIR SINE MIR -100 162 2 835 278 173 16 chr5 150816532 150816982 -52268550 + LTR33 LTR ERVL 1 521 0 524 283 114 49 chr5 150817255 150817963 -52267569 - L2 LINE L2 -3 3269 2521 2248 106 0 20 chr5 150817964 150818131 -52267401 - AluSx SINE Alu -13 299 139 2415 77 7 7 chr5 150818131 150818431 -52267101 - AluSq SINE Alu -13 300 1 2248 106 0 20 chr5 150818431 150818566 -52266966 - AluSx SINE Alu -173 139 3 225 279 107 57 chr5 150818659 150818781 -52266751 - MIR SINE MIR -12 250 123 2248 129 0 0 chr5 150819073 150819375 -52266157 + AluSx SINE Alu 1 302 -10 2273 103 3 3 chr5 150820151 150820451 -52265081 - AluSx SINE Alu -12 300 1 646 228 29 0 chr5 150820595 150820766 -52264766 - L1MEc LINE L1 -4567 1996 1821 2198 116 0 19 chr5 150820781 150821099 -52264433 - AluSx SINE Alu 0 312 1 1050 233 58 71 chr5 150821106 150821528 -52264004 - L1MEc LINE L1 -4782 1665 1239 309 26 0 0 chr5 150821528 150821566 -52263966 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7346 42 17 37 chr5 150821566 150823228 -52262304 - SVA Other Other -683 1363 7 1050 233 58 71 chr5 150823228 150823364 -52262168 - L1MEc LINE L1 -5206 1241 1063 1964 120 67 30 chr5 150823364 150823501 -52262031 + AluSx SINE Alu 1 132 -180 2271 107 3 10 chr5 150823501 150823811 -52261721 + AluSg SINE Alu 1 308 -2 1964 120 67 30 chr5 150823811 150823973 -52261559 + AluSx SINE Alu 132 311 -1 2246 106 7 7 chr5 150823992 150824294 -52261238 + AluSq SINE Alu 6 307 -6 2349 100 0 3 chr5 150824294 150824593 -52260939 + AluSx SINE Alu 1 299 -13 2406 88 3 0 chr5 150824608 150824904 -52260628 - AluSp SINE Alu -16 297 1 665 147 0 0 chr5 150824911 150825020 -52260512 - AluSg/x SINE Alu 0 310 202 3412 238 42 19 chr5 150825058 150825277 -52260255 - L1MEc LINE L1 -5424 1139 927 2358 100 7 0 chr5 150825277 150825578 -52259954 - AluSq SINE Alu -10 303 1 3412 238 42 19 chr5 150825578 150826302 -52259230 - L1MEc LINE L1 -5636 927 174 932 224 4 21 chr5 150826324 150826561 -52258971 + L1MA4 LINE L1 6068 6300 0 306 322 13 47 chr5 150827159 150827308 -52258224 + MIR SINE MIR 37 180 -82 2179 115 0 7 chr5 150827529 150827843 -52257689 - AluSx SINE Alu 0 312 1 2205 120 7 0 chr5 150828846 150829138 -52256394 - AluSq SINE Alu -19 294 1 2040 150 3 0 chr5 150829586 150829880 -52255652 - AluSx SINE Alu -17 295 1 14499 114 17 77 chr5 150830072 150830398 -52255134 - Tigger1 DNA MER2_type 0 2418 2074 1832 160 17 14 chr5 150830398 150830686 -52254846 - AluJb SINE Alu -23 289 1 14499 114 17 77 chr5 150830686 150830753 -52254779 - Tigger1 DNA MER2_type -344 2074 2005 2264 125 3 10 chr5 150830753 150831066 -52254466 - AluSx SINE Alu -1 311 1 14499 114 17 77 chr5 150831066 150832007 -52253525 - Tigger1 DNA MER2_type -413 2005 1009 1776 160 42 0 chr5 150832007 150832294 -52253238 + AluJb SINE Alu 9 307 -5 14499 114 17 77 chr5 150832294 150833529 -52252003 - Tigger1 DNA MER2_type -1409 1009 1 275 191 16 0 chr5 150834428 150834491 -52251041 + CT-rich Low_complexity Low_complexity 1 64 0 620 158 11 0 chr5 150834614 150834709 -52250823 - FLAM_A SINE Alu -46 96 1 2191 89 24 7 chr5 150834715 150835006 -52250526 - AluSg SINE Alu -3 307 12 1882 162 0 23 chr5 150835248 150835550 -52249982 + AluJb SINE Alu 1 295 -17 423 297 55 21 chr5 150835978 150836123 -52249409 - MIR SINE MIR -112 150 1 2576 53 20 0 chr5 150836996 150837299 -52248233 - AluY SINE Alu -2 309 1 2069 119 27 7 chr5 150837299 150837592 -52247940 - AluSx SINE Alu -13 299 1 2112 127 0 3 chr5 150837621 150837905 -52247627 - AluSx SINE Alu -29 283 1 1065 206 90 62 chr5 150837993 150838095 -52247437 - L1ME3A LINE L1 -22 6148 6050 2038 148 0 0 chr5 150838095 150838393 -52247139 + AluSx SINE Alu 13 310 -2 1065 206 90 62 chr5 150838393 150838644 -52246888 - L1ME3A LINE L1 -120 6050 5785 2267 107 0 7 chr5 150839149 150839447 -52246085 + AluSx SINE Alu 1 296 -16 2306 92 0 10 chr5 150840747 150841051 -52244481 + AluSq SINE Alu 1 301 -12 2262 122 0 0 chr5 150841148 150841444 -52244088 - AluSx SINE Alu -16 296 1 508 192 20 10 chr5 150841730 150841829 -52243703 - MIR SINE MIR -112 150 51 236 235 0 59 chr5 150841889 150841957 -52243575 - MIR SINE MIR -16 246 183 1863 154 0 17 chr5 150841983 150842281 -52243251 + AluJb SINE Alu 6 298 -14 582 223 134 32 chr5 150842500 150842657 -52242875 + AluJb SINE Alu 137 309 -3 1763 152 34 24 chr5 150842916 150843212 -52242320 - AluSq SINE Alu -14 299 1 2189 103 10 0 chr5 150843489 150843779 -52241753 - AluSx SINE Alu -18 294 2 1630 158 40 37 chr5 150843985 150844282 -52241250 - AluJb SINE Alu -14 298 1 2685 29 0 13 chr5 150844318 150844625 -52240907 + AluY SINE Alu 1 303 -8 212 179 0 0 chr5 150844666 150844705 -52240827 + A-rich Low_complexity Low_complexity 1 39 0 2045 112 0 3 chr5 150846223 150846530 -52239002 - AluSx SINE Alu 0 306 1 2250 65 0 4 chr5 150846551 150846829 -52238703 - AluY SINE Alu -3 308 32 281 350 64 35 chr5 150847009 150847212 -52238320 - MIR SINE MIR -6 256 48 2328 88 7 0 chr5 150847603 150847897 -52237635 - AluSg SINE Alu -14 296 1 2273 103 0 3 chr5 150847975 150848276 -52237256 - AluSg SINE Alu -8 302 3 1894 167 7 7 chr5 150848278 150848578 -52236954 - AluJo SINE Alu -12 300 1 361 130 119 33 chr5 150848588 150848680 -52236852 - AluYb8 SINE Alu -3 305 243 2279 110 3 3 chr5 150848740 150849039 -52236493 + AluSx SINE Alu 2 300 -12 188 229 0 0 chr5 150849378 150849413 -52236119 - MIR SINE MIR -143 65 31 230 313 0 31 chr5 150849997 150850061 -52235471 + MIR SINE MIR 21 82 -126 2043 141 0 3 chr5 150850143 150850433 -52235099 + AluJb SINE Alu 1 289 -23 1925 165 10 0 chr5 150851141 150851444 -52234088 - AluJo SINE Alu -6 306 1 212 346 74 0 chr5 150851879 150851960 -52233572 + L2 LINE L2 3168 3254 -18 2570 156 139 0 chr5 150852696 150853201 -52232331 - MER90 LTR ERV1 0 575 1 26 0 0 0 chr5 150853442 150853468 -52232064 + AT_rich Low_complexity Low_complexity 1 26 0 1773 262 135 18 chr5 150853476 150854443 -52231089 - L2 LINE L2 0 3313 2224 1087 303 102 20 chr5 150854529 150855018 -52230514 - L2 LINE L2 -1830 1484 956 2287 108 0 3 chr5 150855032 150855327 -52230205 - AluSq SINE Alu -17 296 3 2410 91 0 0 chr5 150855391 150855687 -52229845 + AluSg SINE Alu 1 296 -14 2182 127 0 13 chr5 150855793 150856107 -52229425 - AluJb SINE Alu -2 310 1 1636 186 17 14 chr5 150856363 150856654 -52228878 + AluJo SINE Alu 1 292 -20 2226 97 10 7 chr5 150858580 150858888 -52226644 + AluSx SINE Alu 2 310 -2 25 0 0 0 chr5 150859793 150859818 -52225714 + AT_rich Low_complexity Low_complexity 1 25 0 1937 161 3 0 chr5 150910817 150911122 -52174410 - AluJb SINE Alu -6 306 1 333 0 0 0 chr5 150911134 150911171 -52174361 + (TG)n Simple_repeat Simple_repeat 2 38 0 1650 196 0 7 chr5 150911171 150911452 -52174080 - AluJb SINE Alu -28 284 6 42 0 0 0 chr5 150911457 150911499 -52174033 + AT_rich Low_complexity Low_complexity 1 42 0 866 130 0 0 chr5 150911501 150911616 -52173916 - FLAM_C SINE Alu -28 115 1 811 267 58 64 chr5 150912642 150912889 -52172643 - L1MC5 LINE L1 -36 7925 7678 2267 88 3 14 chr5 150912889 150913184 -52172348 - AluSg SINE Alu -18 292 1 811 267 58 64 chr5 150913184 150913502 -52172030 - L1MC5 LINE L1 -283 7678 7363 185 200 0 0 chr5 150914993 150915033 -52170499 - L2 LINE L2 -4 3268 3229 1518 172 7 32 chr5 150915757 150916036 -52169496 - AluJo SINE Alu -1 311 40 2125 129 0 16 chr5 150916043 150916353 -52169179 - AluSq SINE Alu -3 310 6 855 138 0 8 chr5 150916363 150916493 -52169039 - FLAM_C SINE Alu -3 140 12 2185 127 13 0 chr5 150917476 150917784 -52167748 + AluSx SINE Alu 1 312 0 780 290 156 26 chr5 150917851 150918583 -52166949 - L1ME4a LINE L1 -16 6105 5277 322 286 12 0 chr5 150918640 150918724 -52166808 + L2 LINE L2 3187 3271 -1 2158 98 14 20 chr5 150919226 150919522 -52166010 - AluSc SINE Alu -15 294 1 2058 148 0 0 chr5 150919632 150919935 -52165597 - AluSx SINE Alu -9 303 1 1053 178 22 67 chr5 150919984 150920017 -52165515 + AluJo SINE Alu 87 120 -192 2473 64 0 0 chr5 150920017 150920312 -52165220 - AluY SINE Alu -16 295 1 1053 178 22 67 chr5 150920312 150920503 -52165029 + AluJo SINE Alu 120 301 -11 1444 170 4 0 chr5 150921163 150921398 -52164134 + MER46A DNA MER2_type 1 236 0 650 325 79 37 chr5 150921644 150922376 -52163156 + HAL1b LINE L1 61 823 -525 1575 179 131 148 chr5 150922562 150923380 -52162152 + L1MC5 LINE L1 6728 7531 -430 453 206 77 77 chr5 150923477 150923686 -52161846 + L1ME3A LINE L1 5962 6170 0 390 285 33 26 chr5 150924059 150924210 -52161322 + MIR SINE MIR 27 178 -84 562 196 0 0 chr5 150924300 150924397 -52161135 + L1M4 LINE L1 656 752 -5790 192 40 0 0 chr5 150924445 150924470 -52161062 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 933 219 60 0 chr5 150924471 150924508 -52161024 + AluJo SINE Alu 89 122 -190 210 37 0 0 chr5 150924508 150924535 -52160997 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 933 219 60 0 chr5 150924535 150924680 -52160852 + AluJo SINE Alu 122 282 -30 3036 124 34 0 chr5 150924680 150925154 -52160378 + L1MA6 LINE L1 5471 5960 -340 930 102 36 15 chr5 150925154 150925291 -52160241 - MSTB LTR MaLR 0 426 287 506 139 111 19 chr5 150925306 150925405 -52160127 + FRAM SINE Alu 53 164 -148 180 0 0 0 chr5 150925405 150925425 -52160107 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 7217 185 12 15 chr5 150925473 150926778 -52158754 - MSTB-int LTR MaLR -349 1302 1 2550 150 30 7 chr5 150926786 150927192 -52158340 - MSTB LTR MaLR -11 415 1 1991 135 25 3 chr5 150927196 150927522 -52158010 + L1MA6 LINE L1 5968 6300 0 971 205 14 14 chr5 150927545 150927755 -52157777 + L1M4 LINE L1 4006 4215 -1931 2411 86 0 10 chr5 150927776 150928089 -52157443 - AluY SINE Alu -1 310 1 1684 156 50 7 chr5 150928204 150928486 -52157046 - AluJo SINE Alu -12 300 7 817 323 42 26 chr5 150928567 150928951 -52156581 + L1MB4 LINE L1 395 784 -5758 189 74 0 0 chr5 150928982 150929009 -52156523 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 484 211 23 18 chr5 150929040 150929072 -52156460 + CT-rich Low_complexity Low_complexity 3 33 -141 1938 181 0 0 chr5 150929072 150929371 -52156161 - AluJo SINE Alu -13 299 1 484 211 23 18 chr5 150929371 150929509 -52156023 + CT-rich Low_complexity Low_complexity 33 174 0 2384 104 0 0 chr5 150929509 150929818 -52155714 - AluSc SINE Alu 0 309 1 1247 211 61 21 chr5 150929828 150930108 -52155424 - AluJo SINE Alu -21 291 1 211 231 23 8 chr5 150930108 150930228 -52155304 + CT-rich Low_complexity Low_complexity 8 415 0 1346 219 44 31 chr5 150930264 150930298 -52155234 + L1MB4 LINE L1 816 848 -5694 2135 114 24 7 chr5 150930298 150930596 -52154936 + AluSx SINE Alu 1 303 -9 1346 219 44 31 chr5 150930596 150930921 -52154611 + L1MB4 LINE L1 848 1180 -5362 1530 141 5 0 chr5 150930937 150931157 -52154375 + AluSq SINE Alu 1 221 -92 3296 244 47 22 chr5 150931159 150932424 -52153108 + L1MB4 LINE L1 1353 2798 -4027 1509 138 5 0 chr5 150932424 150932642 -52152890 + AluSg/x SINE Alu 81 299 -11 3296 244 47 22 chr5 150932642 150932802 -52152730 + L1MB4 LINE L1 2798 2952 -3873 366 221 63 0 chr5 150932828 150932923 -52152609 + L1MB4 LINE L1 3183 3283 -3361 * 5338 133 20 26 chr5 150932913 150933909 -52151623 + L1PB3 LINE L1 4677 5640 -516 2081 128 3 13 chr5 150933909 150934207 -52151325 - AluSx SINE Alu -17 295 1 5338 133 20 26 chr5 150934207 150934715 -52150817 + L1PB3 LINE L1 5640 6150 -6 1524 212 35 0 chr5 150934715 150934998 -52150534 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr5 150935030 150935052 -52150480 + AT_rich Low_complexity Low_complexity 1 22 0 203 240 20 0 chr5 150935055 150935105 -52150427 + (CA)n Simple_repeat Simple_repeat 2 52 0 4529 214 85 29 chr5 150935140 150935235 -52150297 + L1MB4 LINE L1 3267 3355 -3289 2328 104 3 0 chr5 150935235 150935532 -52150000 - AluSp SINE Alu -15 298 1 4529 214 85 29 chr5 150935532 150935547 -52149985 + L1MB4 LINE L1 3355 3368 -3276 2421 95 0 3 chr5 150935547 150935851 -52149681 - AluSx SINE Alu -9 303 1 4529 214 85 29 chr5 150935851 150937096 -52148436 + L1MB4 LINE L1 3368 4699 -1945 14253 115 38 5 chr5 150937097 150939206 -52146326 - Tigger1 DNA MER2_type -2 2416 239 1909 144 169 11 chr5 150939207 150939555 -52145977 - MER4A LTR ERV1 -1 663 261 558 146 31 10 chr5 150939555 150939651 -52145881 - MER4A LTR ERV1 -566 98 1 * 1612 137 0 8 chr5 150939651 150939895 -52145637 - Tigger1 DNA MER2_type -2176 242 1 5119 155 20 74 chr5 150939895 150940937 -52144595 + L1MB4 LINE L1 4697 5794 -884 1809 153 42 11 chr5 150940937 150941224 -52144308 + AluJb SINE Alu 1 296 -16 5119 155 20 74 chr5 150941224 150941531 -52144001 + L1MB4 LINE L1 5794 6116 -562 2150 134 0 3 chr5 150941531 150941837 -52143695 + AluSx SINE Alu 1 305 -7 5119 155 20 74 chr5 150941837 150942543 -52142989 + L1MB4 LINE L1 6116 6642 -36 353 207 201 30 chr5 150942638 150942802 -52142730 + L1MC/D LINE L1 3267 3458 -2688 2307 107 0 0 chr5 150942933 150943231 -52142301 + AluSx SINE Alu 3 300 -12 611 291 80 12 chr5 150943259 150943686 -52141846 + L1MC/D LINE L1 5215 5687 -771 433 284 173 0 chr5 150943699 150943924 -52141608 + L2 LINE L2 2693 2956 -358 580 179 0 15 chr5 150943999 150944133 -52141399 + CT-rich Low_complexity Low_complexity 1 132 0 1837 144 138 6 chr5 150944134 150944489 -52141043 - L1MA4 LINE L1 -15 6285 5884 361 314 7 36 chr5 150944626 150944766 -52140766 + L2 LINE L2 3137 3272 0 183 156 0 0 chr5 150945206 150945238 -52140294 - L2 LINE L2 -23 3249 3218 469 206 206 12 chr5 150945731 150945891 -52139641 - MIR SINE MIR -55 207 17 42673 56 6 8 chr5 150947013 150953185 -52132347 - L1PA5 LINE L1 -2 6152 4 2407 61 10 10 chr5 150955643 150955959 -52129573 + AluY SINE Alu 1 316 0 336 254 16 48 chr5 150956258 150956384 -52129148 + MIR SINE MIR 59 180 -82 247 308 44 0 chr5 150956907 150956998 -52128534 - L2 LINE L2 -21 3292 3198 258 222 248 13 chr5 150959953 150960141 -52125391 + MIR3 SINE MIR 5 245 -17 305 253 30 20 chr5 150960443 150960542 -52124990 - MIR SINE MIR -143 119 20 274 330 18 9 chr5 150961855 150961964 -52123568 - L2 LINE L2 -29 3243 3134 2495 156 31 7 chr5 150962964 150963380 -52122152 - MSTB LTR MaLR 0 426 1 820 142 15 22 chr5 150965311 150965445 -52120087 + FLAM_A SINE Alu 1 133 0 453 286 16 8 chr5 150965620 150965746 -52119786 - MIR SINE MIR -113 149 23 234 302 181 0 chr5 150965752 150965868 -52119664 - MIR SINE MIR -80 182 46 475 310 124 48 chr5 150966591 150966681 -52118851 + L1ME4a LINE L1 5403 5485 -636 2310 83 0 19 chr5 150966681 150966994 -52118538 + AluSg SINE Alu 1 307 -3 475 310 124 48 chr5 150966994 150967526 -52118006 + L1ME4a LINE L1 5485 6072 -49 249 291 117 28 chr5 150967604 150967851 -52117681 - L2 LINE L2 -337 2977 2709 185 333 8 43 chr5 150967957 150968074 -52117458 + L2 LINE L2 2948 3060 -212 456 216 144 16 chr5 150968368 150968493 -52117039 - MIR SINE MIR -112 150 10 198 171 0 0 chr5 150969424 150969465 -52116067 + (TG)n Simple_repeat Simple_repeat 1 41 0 194 0 39 0 chr5 150970299 150970325 -52115207 + (TG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 150970719 150970747 -52114785 + AT_rich Low_complexity Low_complexity 1 28 0 4881 117 34 34 chr5 150971304 150971901 -52113631 - L1MB3 LINE L1 -7 6176 5577 2109 114 6 19 chr5 150971901 150972217 -52113315 - AluSx SINE Alu 0 312 1 4881 117 34 34 chr5 150972217 150972503 -52113029 - L1MB3 LINE L1 -605 5578 5293 1995 86 0 22 chr5 150972672 150972950 -52112582 - AluY SINE Alu -6 305 34 294 100 20 0 chr5 150972954 150973004 -52112528 - L2 LINE L2 0 3313 3263 278 233 142 50 chr5 150973123 150973243 -52112289 + MIR SINE MIR 25 155 -107 635 278 22 22 chr5 150973967 150974147 -52111385 + MIR SINE MIR 4 183 -79 252 266 256 30 chr5 150974835 150975034 -52110498 + L2 LINE L2 3026 3269 -3 264 172 183 43 chr5 150975816 150975909 -52109623 + MIR SINE MIR 72 177 -85 225 108 0 0 chr5 150977667 150977704 -52107828 + (T)n Simple_repeat Simple_repeat 1 37 0 22 103 0 0 chr5 150977817 150977895 -52107637 + GC_rich Low_complexity Low_complexity 1 78 0 26 64 0 0 chr5 150983009 150983056 -52102476 + GC_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr5 150983149 150983177 -52102355 + GC_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr5 150984050 150984092 -52101440 + AT_rich Low_complexity Low_complexity 1 42 0 197 33 33 0 chr5 150986275 150986305 -52099227 + (GA)n Simple_repeat Simple_repeat 2 32 0 224 301 57 65 chr5 150986530 150986653 -52098879 - MIR3 SINE MIR -42 166 45 186 315 226 11 chr5 150988205 150988298 -52097234 + MIR SINE MIR 38 149 -62 744 233 128 0 chr5 150988863 150989082 -52096450 - MIR SINE MIR 0 262 16 739 142 0 0 chr5 150989330 150989443 -52096089 + AluSc SINE Alu 192 304 -5 6155 38 0 0 chr5 150990239 150990955 -52094577 - L1PA4 LINE L1 -3 6152 5437 2219 261 38 3 chr5 150991046 150991632 -52093900 - HAL1 LINE L1 -1808 699 94 621 214 14 14 chr5 150993590 150993735 -52091797 + MIR SINE MIR 49 193 -69 194 258 75 43 chr5 150996334 150996427 -52089105 - MIR SINE MIR -107 155 60 492 279 0 0 chr5 150996890 150997062 -52088470 + (TG)n Simple_repeat Simple_repeat 1 172 0 194 278 0 0 chr5 150997710 150997764 -52087768 + MIR SINE MIR 209 262 0 22 0 0 0 chr5 150998338 150998360 -52087172 + GC_rich Low_complexity Low_complexity 1 22 0 481 302 127 31 chr5 151000087 151000378 -52085154 - MLT1L LTR MaLR -81 534 216 288 331 87 85 chr5 151000531 151000909 -52084623 + MLT1K LTR MaLR 192 570 -18 201 200 213 25 chr5 151001225 151001305 -52084227 - MIR SINE MIR 0 262 168 234 289 78 56 chr5 151001531 151001621 -52083911 + L2 LINE L2 3180 3271 -1 * 394 310 47 31 chr5 151001607 151001808 -52083724 - MIR SINE MIR -56 206 3 520 285 64 12 chr5 151001931 151002103 -52083429 - MIR SINE MIR -58 204 24 222 91 0 0 chr5 151002355 151002388 -52083144 + (TG)n Simple_repeat Simple_repeat 2 34 0 1392 159 11 33 chr5 151002697 151002967 -52082565 + AluSx SINE Alu 30 293 -19 926 242 26 26 chr5 151003754 151003985 -52081547 - MIR SINE MIR -12 250 20 460 226 20 0 chr5 151004003 151004105 -52081427 + MER3 DNA MER1_type 45 148 -61 1163 266 71 9 chr5 151004439 151004777 -52080755 + MLT1J LTR MaLR 1 359 -152 291 164 147 69 chr5 151005013 151005129 -52080403 - MIR SINE MIR -92 170 46 183 362 0 14 chr5 151006128 151006197 -52079335 - MIR3 SINE MIR -21 187 120 201 336 111 48 chr5 151006208 151006416 -52079116 - L2 LINE L2 -18 3254 3034 191 250 0 0 chr5 151006988 151007028 -52078504 - L2 LINE L2 -107 3165 3126 230 338 60 15 chr5 151007373 151007506 -52078026 - MIR SINE MIR -17 245 107 1459 208 123 14 chr5 151007691 151008105 -52077427 - MLT1C LTR MaLR -2 465 7 360 304 127 6 chr5 151008806 151008964 -52076568 + MIR SINE MIR 7 183 -79 830 228 53 49 chr5 151009567 151009623 -52075909 - MIR SINE MIR -1 261 207 336 48 0 0 chr5 151009623 151009665 -52075867 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2140 89 0 3 chr5 151009668 151009950 -52075582 - AluSq SINE Alu -32 281 1 830 228 53 49 chr5 151009950 151010135 -52075397 - MIR SINE MIR -56 206 15 303 236 41 73 chr5 151010839 151010962 -52074570 - MIR SINE MIR -91 171 53 1707 284 118 6 chr5 151014364 151015212 -52070320 + L2 LINE L2 2365 3312 -1 5383 237 22 16 chr5 151016160 151017256 -52068276 - L1 LINE L1 -1545 4601 3492 2726 136 26 7 chr5 151017256 151017674 -52067858 + MSTB LTR MaLR 1 426 0 5383 237 22 16 chr5 151017674 151018033 -52067499 - L1 LINE L1 -2654 3492 3137 440 263 73 11 chr5 151018038 151018217 -52067315 - L1ME LINE L1 -479 5685 5496 712 219 67 24 chr5 151018388 151018598 -52066934 - L1ME LINE L1 -1225 4921 4703 446 200 63 0 chr5 151018616 151018711 -52066821 - L1MA9 LINE L1 -38 6274 6174 11047 192 49 11 chr5 151018741 151021916 -52063616 - L1MA9 LINE L1 -388 5924 2629 2044 197 24 106 chr5 151021919 151022702 -52062830 - L1ME LINE L1 -1433 4713 3995 1295 228 90 92 chr5 151022703 151023254 -52062278 + MLT1E LTR MaLR 7 540 -53 471 277 182 4 chr5 151023264 151023506 -52062026 - L1ME LINE L1 -2175 3971 3687 3635 174 20 22 chr5 151023508 151023775 -52061757 - L1MB7 LINE L1 -17 6167 5901 2246 94 0 0 chr5 151023775 151024073 -52061459 - AluSx SINE Alu -14 298 1 3635 174 20 22 chr5 151024073 151024517 -52061015 - L1MB7 LINE L1 -283 5901 5458 451 234 134 100 chr5 151025061 151025300 -52060232 + MIR SINE MIR 4 250 -12 383 337 12 47 chr5 151025315 151025487 -52060045 - MIR SINE MIR -86 176 11 186 242 58 75 chr5 151026100 151026220 -52059312 - MIR SINE MIR -72 136 19 2214 173 60 30 chr5 151027108 151027576 -52057956 - MLT1D LTR MaLR 0 505 24 199 399 14 0 chr5 151028134 151028277 -52057255 + MIR SINE MIR 48 192 -70 471 293 189 11 chr5 151029370 151029561 -52055971 - MIR SINE MIR -10 252 28 2241 92 0 10 chr5 151029577 151029881 -52055651 - AluSq SINE Alu -10 303 3 379 314 88 20 chr5 151030897 151031098 -52054434 + MIR SINE MIR 16 240 -22 279 239 57 0 chr5 151031372 151031460 -52054072 + L1MEd LINE L1 45 137 -5982 288 242 128 128 chr5 151032628 151032917 -52052615 + MLT1I LTR MaLR 57 345 -64 446 264 57 19 chr5 151032943 151033102 -52052430 + L1MEd LINE L1 1091 1255 -4864 31 0 0 0 chr5 151033106 151033137 -52052395 + AT_rich Low_complexity Low_complexity 1 31 0 302 308 0 11 chr5 151033137 151033228 -52052304 + L1MEd LINE L1 1306 1395 -4915 345 317 43 43 chr5 151033337 151033498 -52052034 - MIR3 SINE MIR -27 181 21 2105 214 53 12 chr5 151035030 151035520 -52050012 - L1MC4 LINE L1 -833 7209 6700 189 0 0 0 chr5 151035532 151035553 -52049979 + (TG)n Simple_repeat Simple_repeat 1 21 0 1839 169 56 0 chr5 151035553 151035867 -52049665 + MER7A DNA MER2_type 13 342 -4 643 205 215 15 chr5 151035874 151036079 -52049453 - L1MC4 LINE L1 -1339 6703 6458 1626 223 113 26 chr5 151036197 151036684 -52048848 - L1MB5 LINE L1 0 6243 5716 720 194 89 35 chr5 151036689 151036940 -52048592 + MLT1D LTR MaLR 5 330 -175 3170 204 34 50 chr5 151037062 151037889 -52047643 - L1MB5 LINE L1 -875 5340 4527 424 277 28 59 chr5 151037871 151038032 -52047500 - L1MB5 LINE L1 -2436 3779 3627 * 1016 153 0 23 chr5 151038032 151038209 -52047323 - L1MB7 LINE L1 -18 6166 5994 424 277 28 59 chr5 151038209 151038300 -52047232 - L1MB5 LINE L1 -2588 3627 3535 825 230 74 98 chr5 151038363 151038932 -52046600 - L1MB5 LINE L1 -2677 3538 2984 1082 223 95 52 chr5 151038935 151039590 -52045942 - L1MB5 LINE L1 -3664 2551 1906 4728 223 61 52 chr5 151039676 151041078 -52044454 - L1MC4a LINE L1 0 7808 6395 1401 237 59 9 chr5 151041208 151041674 -52043858 - L1M4 LINE L1 -2286 3860 3347 206 232 196 14 chr5 151041741 151041898 -52043634 - MIR SINE MIR -31 231 16 210 252 207 59 chr5 151042951 151042998 -52042534 + MIR SINE MIR 60 99 -163 1426 176 61 67 chr5 151042998 151043374 -52042158 + MLT1A2 LTR MaLR 1 374 0 210 252 207 59 chr5 151043374 151043461 -52042071 + MIR SINE MIR 99 214 -48 1334 218 29 5 chr5 151043762 151044123 -52041409 - L1MC/D LINE L1 -743 5403 5080 5274 247 64 34 chr5 151044127 151045067 -52040465 + L1ME1 LINE L1 3454 4364 -1802 2256 81 0 43 chr5 151045067 151045390 -52040142 + AluSq SINE Alu 1 309 -4 5274 247 64 34 chr5 151045390 151046546 -52038986 + L1ME1 LINE L1 4364 5678 -488 216 0 0 0 chr5 151046546 151046570 -52038962 + (TTTAG)n Simple_repeat Simple_repeat 2 25 0 5274 247 64 34 chr5 151046570 151047070 -52038462 + L1ME1 LINE L1 5678 6161 -5 2130 225 136 19 chr5 151047099 151047506 -52038026 + L1ME1 LINE L1 5472 5977 -189 1455 144 131 23 chr5 151047506 151047812 -52037720 + MER44D DNA MER2_type 1 609 0 2130 225 136 19 chr5 151047812 151048022 -52037510 + L1ME1 LINE L1 5977 6161 -5 286 312 106 41 chr5 151048635 151048853 -52036679 - MIR SINE MIR -11 251 20 857 184 76 27 chr5 151049753 151049938 -52035594 - MIR SINE MIR -10 252 59 252 111 0 0 chr5 151051111 151051147 -52034385 + MIR SINE MIR 111 146 -62 528 93 0 0 chr5 151051696 151051771 -52033761 + (TCCA)n Simple_repeat Simple_repeat 2 76 0 263 359 94 0 chr5 151052263 151052369 -52033163 + MIR SINE MIR 38 153 -109 216 116 0 47 chr5 151052847 151052890 -52032642 + (TCCC)n Simple_repeat Simple_repeat 2 42 0 371 229 83 0 chr5 151053377 151053473 -52032059 + MIR SINE MIR 48 151 -111 457 244 103 31 chr5 151054547 151054708 -52030824 + MIR SINE MIR 14 185 -35 430 233 0 11 chr5 151055200 151055290 -52030242 + MIR SINE MIR 63 151 -57 560 232 76 45 chr5 151055633 151055852 -52029680 - MIR SINE MIR -9 253 32 250 254 73 36 chr5 151055955 151056065 -52029467 + L1M4 LINE L1 17 130 -6412 * 518 191 51 10 chr5 151056043 151056176 -52029356 + L1MD2 LINE L1 6012 6145 -519 653 100 0 0 chr5 151056176 151056266 -52029266 - MLT1D LTR MaLR 0 505 416 327 146 0 0 chr5 151056640 151056695 -52028837 + (CCCCCA)n Simple_repeat Simple_repeat 2 56 0 183 200 57 0 chr5 151057488 151057523 -52028009 - L2 LINE L2 -7 3265 3229 252 0 0 0 chr5 151059800 151059828 -52025704 + (CGAA)n Simple_repeat Simple_repeat 1 28 0 22 35 0 0 chr5 151060548 151060577 -52024955 + GC_rich Low_complexity Low_complexity 1 29 0 480 309 13 0 chr5 151062410 151062559 -52022973 + MIR SINE MIR 20 170 -92 194 293 24 73 chr5 151063402 151063484 -52022048 + L2 LINE L2 3134 3211 -61 348 356 43 43 chr5 151064427 151064730 -52020802 - L2 LINE L2 -371 2943 2641 457 298 104 48 chr5 151066180 151066496 -52019036 - L2 LINE L2 -2 3270 2937 180 344 159 6 chr5 151067029 151067186 -52018346 - MIR SINE MIR -8 254 74 * 221 342 50 62 chr5 151067184 151067345 -52018187 - MIR SINE MIR 0 262 104 219 220 20 0 chr5 151068736 151068786 -52016746 + MIR SINE MIR 95 145 -63 309 273 61 50 chr5 151068865 151069063 -52016469 - L2 LINE L2 -219 3053 2854 1765 245 50 5 chr5 151070320 151070756 -52014776 + L1MD2 LINE L1 5687 6142 -217 305 161 189 105 chr5 151070757 151070900 -52014632 + L1MD2 LINE L1 6195 6349 -10 332 264 108 16 chr5 151072326 151072455 -52013077 - MIR SINE MIR -101 161 21 271 288 150 46 chr5 151073404 151073557 -52011975 - MIR3 SINE MIR -2 206 38 181 385 44 11 chr5 151073644 151073735 -52011797 - MIR SINE MIR -71 191 98 234 254 60 30 chr5 151074177 151074244 -52011288 + L2 LINE L2 3200 3268 -4 220 343 49 10 chr5 151074586 151074688 -52010844 - MIR SINE MIR -59 149 44 804 259 67 28 chr5 151075613 151075972 -52009560 + L1ME4a LINE L1 5561 5933 -188 885 269 19 0 chr5 151077598 151077810 -52007722 - MIR SINE MIR -11 251 36 2351 166 81 5 chr5 151078582 151079015 -52006517 - MLT1C LTR MaLR -1 466 1 276 30 0 0 chr5 151080301 151080334 -52005198 + (TG)n Simple_repeat Simple_repeat 2 34 0 367 242 109 23 chr5 151080361 151080489 -52005043 - L2 LINE L2 0 3272 3134 2299 197 12 19 chr5 151081205 151081687 -52003845 - MLT1D LTR MaLR -1 504 26 2047 133 10 3 chr5 151082078 151082386 -52003146 - AluSx SINE Alu -2 310 1 1116 152 83 0 chr5 151082669 151082886 -52002646 - MER96B DNA MER1_type? -182 235 1 280 265 33 86 chr5 151083675 151083826 -52001706 + MIR3 SINE MIR 19 161 -47 200 250 30 30 chr5 151085852 151085952 -51999580 + MIR SINE MIR 31 130 -78 22 0 0 0 chr5 151086626 151086648 -51998884 + AT_rich Low_complexity Low_complexity 1 22 0 573 255 130 0 chr5 151087063 151087224 -51998308 + MIR SINE MIR 1 182 -80 2174 102 0 0 chr5 151089085 151089412 -51996120 + AluSq SINE Alu 1 327 0 21 0 0 0 chr5 151091397 151091418 -51994114 + AT_rich Low_complexity Low_complexity 1 21 0 487 301 69 0 chr5 151091565 151091781 -51993751 - MIR SINE MIR 0 262 32 243 233 165 73 chr5 151092562 151092768 -51992764 + L2 LINE L2 2850 3074 -198 434 306 34 0 chr5 151092903 151093050 -51992482 - MIR SINE MIR 0 262 111 262 340 10 10 chr5 151093247 151093347 -51992185 + L2 LINE L2 3189 3288 -25 378 275 28 0 chr5 151095535 151095644 -51989888 + L2 LINE L2 3184 3295 -18 617 71 12 0 chr5 151096042 151096126 -51989406 - AluY SINE Alu -10 301 217 349 312 123 32 chr5 151098085 151098200 -51987332 - L1ME4a LINE L1 -2 6119 6016 1781 107 25 94 chr5 151098200 151098518 -51987014 - AluSx SINE Alu -15 297 2 349 312 123 32 chr5 151098518 151098798 -51986734 - L1ME4a LINE L1 -105 6016 5617 312 270 100 119 chr5 151098803 151099135 -51986397 - L1ME4a LINE L1 -9 6112 5775 1944 112 54 0 chr5 151099135 151099413 -51986119 - AluSx SINE Alu -19 293 1 312 270 100 119 chr5 151099413 151099772 -51985760 - L1ME4a LINE L1 -346 5775 5395 464 301 146 14 chr5 151100180 151100399 -51985133 - MIR SINE MIR -13 249 2 1628 96 12 12 chr5 151101010 151101259 -51984273 - MSTA LTR MaLR -1 427 179 286 281 25 8 chr5 151101267 151101388 -51984144 - HAL1 LINE L1 -93 2414 2292 1108 68 0 0 chr5 151101390 151101523 -51984009 + AluSq/x SINE Alu 1 133 -180 2821 249 69 28 chr5 151101531 151102372 -51983160 - HAL1 LINE L1 -203 2304 1412 1935 140 76 31 chr5 151102372 151102729 -51982803 - THE1C LTR MaLR -2 373 1 2821 249 69 28 chr5 151102729 151102918 -51982614 - HAL1 LINE L1 -1095 1412 1232 230 203 102 112 chr5 151102984 151103171 -51982361 + MLT1H LTR MaLR 119 303 -246 799 233 160 14 chr5 151103274 151103618 -51981914 - HAL1 LINE L1 -1270 1237 844 6366 22 0 0 chr5 151103637 151104353 -51981179 - L1PA3 LINE L1 -3 6152 5437 2219 261 38 3 chr5 151104444 151105030 -51980502 - HAL1 LINE L1 -1808 699 94 681 303 117 12 chr5 151105266 151105759 -51979773 - L1ME4a LINE L1 -202 5919 5370 180 0 0 0 chr5 151106177 151106197 -51979335 + (A)n Simple_repeat Simple_repeat 1 20 0 180 323 20 40 chr5 151108896 151108995 -51976537 - L2 LINE L2 -219 3053 2957 5612 132 26 0 chr5 151109214 151110126 -51975406 - L1MA5 LINE L1 -2 6298 5363 1187 173 57 25 chr5 151110122 151110269 -51975263 + L1 LINE L1 5093 5234 -912 * 2933 65 19 0 chr5 151110269 151110636 -51974896 + THE1C LTR MaLR 1 374 -1 1187 173 57 25 chr5 151110636 151110771 -51974761 + L1 LINE L1 5234 5384 -762 237 329 13 0 chr5 151112494 151112573 -51972959 - MIR3 SINE MIR -23 185 106 530 268 42 12 chr5 151112589 151112757 -51972775 + MIR SINE MIR 22 194 -68 186 71 0 0 chr5 151113757 151113785 -51971747 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5360 65 22 23 chr5 151113785 151113905 -51971627 - L1PB1 LINE L1 -11 6140 6021 2119 118 3 0 chr5 151113905 151114201 -51971331 - AluSp SINE Alu -14 299 3 5360 65 22 23 chr5 151114201 151114446 -51971086 - L1PB1 LINE L1 -130 6021 5777 237 33 0 0 chr5 151114446 151114476 -51971056 + (TG)n Simple_repeat Simple_repeat 2 31 0 5360 65 22 23 chr5 151114476 151114878 -51970654 - L1PB1 LINE L1 -374 5777 5373 730 257 170 0 chr5 151114892 151115098 -51970434 + MIR SINE MIR 7 247 -15 212 330 22 0 chr5 151115114 151115205 -51970327 + L2 LINE L2 2217 2309 -1005 508 265 68 0 chr5 151117294 151117426 -51968106 + MIR SINE MIR 12 152 -110 181 229 0 0 chr5 151117446 151117481 -51968051 + L2 LINE L2 3217 3251 -21 5702 117 9 0 chr5 151117840 151118703 -51966829 + L1PB3 LINE L1 5284 6154 0 317 209 70 108 chr5 151118896 151119025 -51966507 - HAL1b LINE L1 0 1348 1225 3136 181 18 20 chr5 151119260 151119700 -51965832 - MER44D DNA MER2_type -1882 605 110 1705 146 4 11 chr5 151119700 151119980 -51965552 - AluSx SINE Alu -11 301 24 3136 181 18 20 chr5 151119980 151120090 -51965442 - MER44D DNA MER2_type -2377 110 1 245 274 26 35 chr5 151120180 151120293 -51965239 - L1ME LINE L1 -338 5783 5672 312 253 291 13 chr5 151120367 151120525 -51965007 - L1ME LINE L1 -2283 5525 5324 697 120 154 17 chr5 151120620 151120737 -51964795 + FLAM_C SINE Alu 1 133 0 269 259 111 19 chr5 151121098 151121206 -51964326 - MIR3 SINE MIR -3 205 88 300 111 0 0 chr5 151121659 151121704 -51963828 + (TG)n Simple_repeat Simple_repeat 2 46 0 193 263 11 74 chr5 151121911 151122006 -51963526 + L2 LINE L2 2992 3080 -192 189 219 0 0 chr5 151122187 151122228 -51963304 + MIR SINE MIR 215 255 -7 242 283 0 17 chr5 151123187 151123247 -51962285 + MIR SINE MIR 20 78 -184 262 233 83 0 chr5 151123433 151123493 -51962039 - L2 LINE L2 -5 3308 3244 455 291 0 16 chr5 151123569 151123696 -51961836 - L2 LINE L2 -205 3067 2943 276 323 137 0 chr5 151123803 151124029 -51961503 - L2 LINE L2 -636 2678 2422 2134 98 7 3 chr5 151125043 151125338 -51960194 - AluY SINE Alu -15 296 1 614 229 13 0 chr5 151125415 151125568 -51959964 - MER103 DNA DNA -1 165 11 725 179 6 42 chr5 151126181 151126349 -51959183 + MER5B DNA MER1_type 5 166 -12 579 236 133 20 chr5 151126573 151126768 -51958764 - MIR SINE MIR -4 258 42 1109 181 55 0 chr5 151126961 151127160 -51958372 - MER63A DNA MER1_type 0 210 1 278 211 11 4 chr5 151129496 151129588 -51955944 - MIR SINE MIR -107 155 32 260 203 27 54 chr5 151130235 151130309 -51955223 + MIR SINE MIR 65 136 -72 292 288 126 0 chr5 151130356 151130467 -51955065 + MIR SINE MIR 131 255 -7 296 313 26 17 chr5 151130668 151130783 -51954749 + MIR3 SINE MIR 4 119 -89 231 303 48 61 chr5 151130905 151131070 -51954462 - MIR3 SINE MIR -45 163 1 848 256 52 0 chr5 151132587 151132817 -51952715 + MIR SINE MIR 20 261 -1 2177 53 0 0 chr5 151133679 151133941 -51951591 - AluY SINE Alu -11 300 39 254 225 169 0 chr5 151135311 151135382 -51950150 + MIR SINE MIR 65 147 -115 194 159 45 0 chr5 151135860 151135904 -51949628 + CT-rich Low_complexity Low_complexity 4 49 0 2313 46 0 11 chr5 151137384 151137691 -51947841 - AluY SINE Alu 0 304 1 216 305 0 0 chr5 151137836 151137895 -51947637 - L2 LINE L2 -8 3264 3206 609 262 112 14 chr5 151138101 151138315 -51947217 - MIR SINE MIR -21 241 7 875 224 125 0 chr5 151140349 151140581 -51944951 + MIR SINE MIR 2 262 0 2025 138 0 0 chr5 151140633 151140929 -51944603 + AluSx SINE Alu 1 296 -16 352 262 184 12 chr5 151141009 151141177 -51944355 + MIR SINE MIR 65 261 -1 268 234 139 147 chr5 151142262 151142287 -51943245 - MIR SINE MIR 0 262 238 2254 106 3 0 chr5 151142287 151142590 -51942942 + AluSq SINE Alu 1 304 -9 198 0 0 0 chr5 151142590 151142612 -51942920 + (TA)n Simple_repeat Simple_repeat 2 23 0 268 234 139 147 chr5 151142612 151142837 -51942695 - MIR SINE MIR -22 240 13 682 318 75 17 chr5 151143903 151144249 -51941283 - MLT1K LTR MaLR -73 515 150 382 194 182 0 chr5 151144633 151144745 -51940787 - MIR SINE MIR -72 136 21 699 228 61 17 chr5 151145816 151145996 -51939536 + MIR SINE MIR 47 234 -28 275 281 169 11 chr5 151146518 151146607 -51938925 - MIR SINE MIR -114 148 46 324 343 68 20 chr5 151147146 151147292 -51938240 + L2 LINE L2 3122 3274 -39 285 299 201 0 chr5 151148130 151148294 -51937238 - MIR SINE MIR -12 250 54 245 282 30 69 chr5 151149223 151149354 -51936178 - HAL1 LINE L1 -6 2501 2376 1237 276 47 39 chr5 151149469 151149591 -51935941 - L1MC4a LINE L1 -1921 5887 5767 1768 117 0 8 chr5 151149591 151149855 -51935677 - AluSg SINE Alu -7 303 42 1237 276 47 39 chr5 151149855 151150217 -51935315 - L1MC4a LINE L1 -2041 5767 5399 258 310 69 0 chr5 151151443 151151530 -51934002 + L2 LINE L2 3220 3312 -1 449 285 72 6 chr5 151153703 151153865 -51931667 + MLT1I LTR MaLR 15 182 -253 190 143 0 0 chr5 151154192 151154227 -51931305 + L2 LINE L2 3277 3311 -2 192 40 0 0 chr5 151154522 151154547 -51930985 + (TG)n Simple_repeat Simple_repeat 1 25 0 * 204 158 0 0 chr5 151154541 151154579 -51930953 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 185 306 71 0 chr5 151154789 151154874 -51930658 + L2 LINE L2 2966 3056 -257 325 315 65 11 chr5 151155077 151155261 -51930271 + L3 LINE CR1 1232 1425 -152 405 296 87 40 chr5 151157530 151157783 -51927749 + L2 LINE L2 3049 3313 0 326 346 45 0 chr5 151157801 151157934 -51927598 - MIR SINE MIR -74 188 50 455 255 65 13 chr5 151159271 151159424 -51926108 - MIR SINE MIR -66 196 36 902 160 66 22 chr5 151161344 151161525 -51924007 - MER5A DNA MER1_type 0 189 1 250 198 279 0 chr5 151162342 151162428 -51923104 + MIR SINE MIR 37 146 -62 237 240 80 13 chr5 151162693 151162768 -51922764 + MIR SINE MIR 93 172 -90 190 300 57 0 chr5 151162774 151162844 -51922688 - L2 LINE L2 -17 3255 3182 607 266 146 37 chr5 151163213 151163616 -51921916 - HAL1 LINE L1 -131 2376 1930 1025 260 130 13 chr5 151163620 151163843 -51921689 - HAL1 LINE L1 -623 1884 1688 1785 179 13 13 chr5 151163843 151164151 -51921381 - AluJo SINE Alu -4 308 1 1025 260 130 13 chr5 151164151 151164312 -51921220 - HAL1 LINE L1 -819 1688 1455 * 5725 64 14 15 chr5 151164300 151165097 -51920435 - L1PA8 LINE L1 -1 6171 5376 593 313 106 28 chr5 151165126 151165410 -51920122 - HAL1 LINE L1 -1055 1452 1147 4829 189 108 39 chr5 151165445 151165620 -51919912 - Charlie1a DNA MER1_type -1320 1441 1280 2095 128 20 10 chr5 151165620 151165918 -51919614 + AluSx SINE Alu 1 301 -11 4829 189 108 39 chr5 151165918 151167090 -51918442 - Charlie1a DNA MER1_type -1481 1280 1 1132 288 111 42 chr5 151167090 151168099 -51917433 - HAL1 LINE L1 -1364 1143 65 2922 82 0 0 chr5 151168103 151168467 -51917065 - THE1B LTR MaLR 0 364 1 1791 218 100 60 chr5 151168471 151169041 -51916491 + MLT1E LTR MaLR 1 593 0 228 269 39 58 chr5 151169539 151169643 -51915889 + MIR SINE MIR 33 134 -128 457 318 40 20 chr5 151169646 151169794 -51915738 - L2 LINE L2 0 3272 3122 350 250 128 14 chr5 151169805 151169953 -51915579 + Charlie8 DNA MER1_type 1 165 -2252 3758 38 0 0 chr5 151172518 151172965 -51912567 + L1PA4 LINE L1 5706 6152 -3 733 142 0 0 chr5 151173761 151173874 -51911658 - AluSc SINE Alu -5 304 192 795 228 128 0 chr5 151174122 151174341 -51911191 + MIR SINE MIR 16 262 0 193 240 313 21 chr5 151174910 151175006 -51910526 - MIR SINE MIR -62 146 23 226 293 57 65 chr5 151176551 151176674 -51908858 + MIR3 SINE MIR 45 166 -42 197 33 33 0 chr5 151176899 151176929 -51908603 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 71 0 0 chr5 151179112 151179154 -51906378 + AT_rich Low_complexity Low_complexity 1 42 0 189 222 0 0 chr5 151179757 151179793 -51905739 + L2 LINE L2 3025 3060 -212 339 305 24 85 chr5 151179886 151180050 -51905482 + L2 LINE L2 3117 3270 -2 484 337 38 5 chr5 151180193 151180377 -51905155 + MIR SINE MIR 10 199 -63 1027 253 66 138 chr5 151180784 151181526 -51904006 - MLT1D-int LTR MaLR -134 1237 549 208 148 37 19 chr5 151181526 151181580 -51903952 + A-rich Low_complexity Low_complexity 3 57 0 2089 108 44 7 chr5 151181608 151181905 -51903627 - AluSx SINE Alu -4 308 1 351 238 12 8 chr5 151182768 151182944 -51902588 - MLT1D-int LTR MaLR -485 886 674 239 192 39 0 chr5 151183075 151183127 -51902405 - MLT1D-int LTR MaLR -769 602 549 208 148 37 19 chr5 151183127 151183181 -51902351 + A-rich Low_complexity Low_complexity 3 57 0 2358 102 3 0 chr5 151183210 151183515 -51902017 - AluSg SINE Alu -4 306 1 1972 222 35 4 chr5 151183515 151184022 -51901510 - MLT1D-int LTR MaLR -843 528 3 654 180 16 123 chr5 151184060 151184464 -51901068 - MLT1D LTR MaLR -55 450 1 278 250 0 50 chr5 151184577 151184657 -51900875 + MIR SINE MIR 86 161 -101 193 426 19 0 chr5 151184648 151184756 -51900776 - L2 LINE L2 -2816 498 389 * 208 289 0 0 chr5 151184821 151184859 -51900673 - L2 LINE L2 -22 3291 3254 824 190 10 45 chr5 151184884 151185084 -51900448 + MER3 DNA MER1_type 17 209 0 431 279 62 8 chr5 151186012 151186141 -51899391 - L2 LINE L2 0 3272 3137 517 288 35 126 chr5 151186406 151186955 -51898577 - L2 LINE L2 -6 3307 2809 381 166 28 212 chr5 151186993 151187210 -51898322 + Charlie4a DNA MER1_type 21 197 -311 794 161 13 7 chr5 151187224 151187373 -51898159 - L1MB4 LINE L1 0 6180 6031 431 156 0 22 chr5 151187375 151187465 -51898067 + T-rich Low_complexity Low_complexity 4 91 0 7197 42 34 0 chr5 151187466 151188399 -51897133 - L1PA7 LINE L1 0 6154 5219 729 198 228 0 chr5 151188433 151188670 -51896862 + Charlie4a DNA MER1_type 214 504 -4 864 274 113 30 chr5 151188674 151188771 -51896761 - L2 LINE L2 -504 2810 2722 2324 85 0 17 chr5 151188771 151189066 -51896466 - AluSc SINE Alu -19 290 1 864 274 113 30 chr5 151189066 151189296 -51896236 - L2 LINE L2 -592 2722 2456 202 152 0 0 chr5 151189340 151189373 -51896159 - L2 LINE L2 -224 3048 3016 456 200 30 20 chr5 151190484 151190584 -51894948 - L2 LINE L2 -30 3283 3183 740 158 0 31 chr5 151190614 151190741 -51894791 + FRAM SINE Alu 54 176 0 430 228 35 9 chr5 151191585 151191699 -51893833 + MER3 DNA MER1_type 38 154 -55 1737 154 52 8 chr5 151191760 151192124 -51893408 + MER3 DNA MER1_type 2242 2621 0 898 216 82 13 chr5 151192196 151192428 -51893104 - MIR SINE MIR -13 249 2 299 302 155 0 chr5 151192750 151192866 -51892666 - MIR SINE MIR -109 153 20 5590 144 28 19 chr5 151193170 151194802 -51890730 - L1MA6 LINE L1 -2 6298 4656 352 232 141 0 chr5 151194969 151195068 -51890464 + MIR SINE MIR 32 144 -118 315 246 33 21 chr5 151196758 151196849 -51888683 + MIR SINE MIR 17 103 -105 330 287 126 48 chr5 151197691 151198001 -51887531 - L1ME4a LINE L1 -177 5944 5611 2393 101 0 7 chr5 151198030 151198338 -51887194 - AluSg SINE Alu -4 306 1 229 163 23 0 chr5 151198545 151198588 -51886944 - MIR SINE MIR -65 143 100 563 292 102 25 chr5 151199131 151199453 -51886079 - L2 LINE L2 -21 3251 2905 652 272 35 12 chr5 151200538 151200711 -51884821 + MIR SINE MIR 8 184 -78 397 289 195 7 chr5 151201201 151201350 -51884182 - MIR SINE MIR -10 252 76 202 232 11 126 chr5 151203030 151203125 -51882407 + MIR SINE MIR 179 262 0 1038 39 78 0 chr5 151203145 151203274 -51882258 + MER85 DNA T2_type 1 139 0 2458 197 39 57 chr5 151203407 151203670 -51881862 + MER82 DNA MER2_type 1 267 -386 1635 77 45 9 chr5 151203670 151203890 -51881642 - MER30 DNA MER1_type -2 228 1 2458 197 39 57 chr5 151203890 151204068 -51881464 + MER82 DNA MER2_type 267 430 -223 2121 132 7 7 chr5 151204068 151204378 -51881154 + AluSq SINE Alu 3 312 -1 2458 197 39 57 chr5 151204378 151204554 -51880978 + MER82 DNA MER2_type 430 608 -45 770 246 74 9 chr5 151205394 151205520 -51880012 + MIR SINE MIR 13 160 -102 2352 110 3 0 chr5 151205520 151205830 -51879702 + AluSx SINE Alu 1 311 -1 770 246 74 9 chr5 151205830 151205918 -51879614 + MIR SINE MIR 160 241 -21 365 267 143 25 chr5 151205956 151206117 -51879415 + MIR SINE MIR 80 259 -3 7085 166 30 13 chr5 151217977 151218102 -51867430 - L1PA16 LINE L1 0 6166 6045 2324 94 7 0 chr5 151218102 151218399 -51867133 - AluSg SINE Alu -11 299 1 7085 166 30 13 chr5 151218399 151220684 -51864848 - L1PA16 LINE L1 -121 6045 3716 389 183 103 40 chr5 151220688 151220814 -51864718 - L1MC4 LINE L1 -405 7637 7504 * 4286 255 59 71 chr5 151220810 151223916 -51861616 - L1MC4a LINE L1 -480 7328 4263 1838 185 105 41 chr5 151223921 151224408 -51861124 + Charlie1b DNA MER1_type 1 518 -5 382 285 98 0 chr5 151224414 151224628 -51860904 - L1MC4a LINE L1 -1885 4261 4027 240 259 27 27 chr5 151224906 151225018 -51860514 - HAL1b LINE L1 -542 806 695 511 303 30 38 chr5 151225254 151225647 -51859885 - HAL1b LINE L1 -913 435 46 34 0 0 0 chr5 151226964 151226998 -51858534 + AT_rich Low_complexity Low_complexity 1 34 0 1402 93 0 33 chr5 151226998 151227212 -51858320 - L1PA14 LINE L1 0 6161 5955 635 280 38 10 chr5 151227639 151227986 -51857546 + L1ME LINE L1 5078 5434 -728 347 266 0 11 chr5 151228086 151228180 -51857352 + L1ME3A LINE L1 5782 5874 -296 21 0 0 0 chr5 151228506 151228527 -51857005 + AT_rich Low_complexity Low_complexity 1 21 0 650 220 37 51 chr5 151228534 151228748 -51856784 + L1MC5 LINE L1 7722 7932 -29 441 238 113 13 chr5 151228860 151229011 -51856521 - LTR33 LTR ERVL -13 508 343 340 209 143 0 chr5 151229193 151229284 -51856248 - LTR33 LTR ERVL -410 111 8 318 309 73 41 chr5 151229357 151229577 -51855955 - L1ME3 LINE L1 -212 5950 5724 487 278 19 31 chr5 151229767 151229926 -51855606 + MIR3 SINE MIR 6 160 -62 732 292 93 17 chr5 151230624 151230860 -51854672 - MIR SINE MIR -4 258 5 234 312 35 84 chr5 151230850 151231052 -51854480 + L2 LINE L2 3063 3254 -18 * 608 316 176 18 chr5 151232231 151232623 -51852909 - L2 LINE L2 -3 3310 2857 216 296 235 0 chr5 151233606 151233704 -51851828 + MIR SINE MIR 1 121 -141 903 174 47 12 chr5 151233805 151233977 -51851555 - MER5A DNA MER1_type -1 188 11 550 273 53 21 chr5 151233992 151234179 -51851353 - MIR SINE MIR -69 193 1 227 290 86 0 chr5 151236657 151236750 -51848782 + L1ME LINE L1 5494 5594 -527 413 323 66 20 chr5 151237055 151237253 -51848279 + MIR SINE MIR 20 226 -36 284 329 84 34 chr5 151237347 151237584 -51847948 - L3b LINE CR1 -42 1541 1293 1036 288 92 63 chr5 151237765 151238718 -51846814 + L2 LINE L2 2276 3246 -26 335 236 34 11 chr5 151239490 151239579 -51845953 + MIR SINE MIR 46 136 -72 285 242 0 30 chr5 151239755 151239821 -51845711 + MIR SINE MIR 89 152 -56 184 214 48 0 chr5 151240014 151240056 -51845476 - MIR SINE MIR -70 138 95 322 234 102 37 chr5 151243419 151243598 -51841934 + MIR3 SINE MIR 1 191 -58 264 273 121 23 chr5 151243733 151243865 -51841667 + MIR3 SINE MIR 3 147 -61 694 281 61 4 chr5 151244852 151245080 -51840452 - MIR SINE MIR -14 248 8 1680 283 178 32 chr5 151245357 151246935 -51838597 - L2 LINE L2 -3 3310 1487 536 267 64 43 chr5 151247322 151247509 -51838023 + MIR SINE MIR 13 203 -59 417 289 67 13 chr5 151247585 151247734 -51837798 + MIR SINE MIR 58 214 -48 21 0 0 0 chr5 151248479 151248500 -51837032 + GC_rich Low_complexity Low_complexity 1 21 0 359 236 155 20 chr5 151248771 151248919 -51836613 + L3 LINE CR1 1405 1572 -5 649 260 104 0 chr5 151249223 151249396 -51836136 - MIR SINE MIR 0 262 72 196 273 182 0 chr5 151250263 151250329 -51835203 - MIR SINE MIR -108 154 77 744 182 0 45 chr5 151250544 151250698 -51834834 + MER63 DNA MER1_type 2 774 -288 917 200 99 103 chr5 151251565 151252020 -51833512 + LTR33A LTR ERVL 1 453 -70 201 239 22 0 chr5 151252080 151252126 -51833406 + (CCCTG)n Simple_repeat Simple_repeat 3 49 0 422 225 68 78 chr5 151252367 151252558 -51832974 - MIR3 SINE MIR -15 193 5 181 292 112 34 chr5 151253381 151253470 -51832062 - L2 LINE L2 -496 2818 2723 294 318 103 8 chr5 151253762 151253888 -51831644 + MIR SINE MIR 113 250 -12 1765 99 0 0 chr5 151254400 151254621 -51830911 + AluSg/x SINE Alu 73 293 -19 1939 145 33 3 chr5 151254632 151254935 -51830597 + AluJo SINE Alu 1 312 0 840 259 43 89 chr5 151257243 151257660 -51827872 - L2 LINE L2 0 3313 2916 1099 118 67 6 chr5 151257951 151258129 -51827403 - MER5A DNA MER1_type 0 189 1 234 0 0 0 chr5 151258651 151258677 -51826855 + (TC)n Simple_repeat Simple_repeat 1 26 0 392 295 126 11 chr5 151260559 151260742 -51824790 - MIR SINE MIR 0 262 59 683 229 173 9 chr5 151260882 151261096 -51824436 + MIR SINE MIR 14 262 0 224 283 0 0 chr5 151261167 151261213 -51824319 + L2 LINE L2 3268 3313 0 185 187 40 93 chr5 151262454 151262529 -51823003 - L2 LINE L2 -221 3051 2981 208 314 129 8 chr5 151262632 151262756 -51822776 - MER5B DNA MER1_type -9 169 31 488 227 15 84 chr5 151265398 151265601 -51819931 + MIR SINE MIR 20 208 -54 199 161 0 0 chr5 151265667 151265698 -51819834 - MIR SINE MIR -84 124 94 185 253 66 33 chr5 151267926 151268017 -51817515 + MIR SINE MIR 119 212 -50 407 303 117 6 chr5 151268682 151268844 -51816688 - MIR SINE MIR -10 252 73 249 290 20 30 chr5 151268877 151268977 -51816555 + L2 LINE L2 3142 3240 -32 203 86 0 29 chr5 151270288 151270323 -51815209 + (TCTCC)n Simple_repeat Simple_repeat 4 37 0 2112 122 7 0 chr5 151270433 151270727 -51814805 + AluSx SINE Alu 1 296 -16 362 294 34 14 chr5 151270814 151270960 -51814572 - MIR3 SINE MIR -18 190 42 199 214 67 34 chr5 151270993 151271082 -51814450 - L2 LINE L2 -213 3059 2968 1327 232 48 46 chr5 151271446 151271860 -51813672 - MLT1C LTR MaLR 0 467 53 838 222 0 54 chr5 151272174 151272395 -51813137 + MER3 DNA MER1_type 1 209 0 399 219 123 26 chr5 151273808 151273922 -51811610 - L2 LINE L2 -6 3307 3183 1904 139 40 91 chr5 151274462 151274857 -51810675 + THE1C LTR MaLR 1 375 0 226 237 340 0 chr5 151275210 151275307 -51810225 - L2 LINE L2 0 3272 3143 209 267 0 0 chr5 151275640 151275700 -51809832 - L3 LINE CR1 -548 1029 970 588 259 111 16 chr5 151276857 151277046 -51808486 + MIR SINE MIR 6 212 -50 2240 291 116 31 chr5 151277328 151279063 -51806469 + L1ME2 LINE L1 25 1904 -4890 461 257 105 7 chr5 151279124 151279276 -51806256 + L1ME2 LINE L1 2302 2468 -4654 6261 238 66 24 chr5 151279276 151281544 -51803988 + L1ME2 LINE L1 2724 5046 -1895 7633 117 14 7 chr5 151281563 151283289 -51802243 - L1MA2 LINE L1 0 6304 4563 3304 223 60 10 chr5 151283299 151284962 -51800570 + L1ME2 LINE L1 5047 6805 -154 277 253 36 0 chr5 151284984 151285067 -51800465 + L1ME2 LINE L1 6874 6959 0 30 0 0 0 chr5 151285840 151285870 -51799662 + AT_rich Low_complexity Low_complexity 1 30 0 508 279 6 13 chr5 151287888 151288046 -51797486 + L2 LINE L2 3156 3312 -1 227 327 10 19 chr5 151289027 151289131 -51796401 - L2 LINE L2 -10 3262 3160 206 200 0 0 chr5 151289502 151289547 -51795985 - L2 LINE L2 -21 3292 3248 472 271 141 21 chr5 151290470 151290665 -51794867 - L1MC/D LINE L1 -603 5575 5405 2298 84 0 42 chr5 151290665 151290975 -51794557 + AluSx SINE Alu 1 297 -15 472 271 141 21 chr5 151290975 151291333 -51794199 - L1MC/D LINE L1 -773 5405 5191 21 36 0 0 chr5 151291466 151291494 -51794038 + AT_rich Low_complexity Low_complexity 1 28 0 2316 103 0 0 chr5 151292999 151293291 -51792241 + AluSx SINE Alu 1 292 -20 1002 109 43 71 chr5 151293292 151293476 -51792056 - L1MB3 LINE L1 -7 6176 5998 496 223 85 8 chr5 151293771 151293901 -51791631 - MIR SINE MIR -110 152 13 545 221 87 35 chr5 151294904 151295076 -51790456 - MIR SINE MIR -68 194 14 590 221 121 0 chr5 151295645 151295794 -51789738 + MIR SINE MIR 45 211 -51 282 276 69 35 chr5 151296118 151296234 -51789298 - L2 LINE L2 -7 3265 3146 240 354 35 0 chr5 151296263 151296376 -51789156 - L2 LINE L2 -6 3307 3191 870 250 37 8 chr5 151296483 151296727 -51788805 + MIR SINE MIR 1 251 -11 2381 68 3 0 chr5 151296841 151297135 -51788397 + AluY SINE Alu 1 295 -16 1018 280 81 52 chr5 151297173 151297812 -51787720 + L1MC4a LINE L1 5254 5911 -1897 5823 243 105 58 chr5 151298766 151299635 -51785897 - HAL1 LINE L1 0 2507 1681 2167 118 0 13 chr5 151299635 151299940 -51785592 - AluY SINE Alu -10 301 1 5823 243 105 58 chr5 151299940 151300959 -51784573 - HAL1 LINE L1 -826 1681 479 1903 149 40 63 chr5 151300959 151301356 -51784176 - MLT1B LTR MaLR -2 388 1 5823 243 105 58 chr5 151301356 151301857 -51783675 - HAL1 LINE L1 -2028 479 3 366 317 14 14 chr5 151302745 151302887 -51782645 - MIR SINE MIR -77 185 44 291 241 66 29 chr5 151303081 151303218 -51782314 + L2 LINE L2 2555 2696 -618 1862 210 31 39 chr5 151303220 151303705 -51781827 - L1ME2 LINE L1 0 6164 5684 5907 107 8 28 chr5 151303716 151303803 -51781729 - L1PA16 LINE L1 -10 6156 6069 2374 128 28 14 chr5 151303803 151304162 -51781370 + THE1B LTR MaLR 1 364 0 5907 107 8 28 chr5 151304162 151305744 -51779788 - L1PA16 LINE L1 -97 6069 4502 788 271 96 31 chr5 151355926 151356343 -51729189 + L1MC/D LINE L1 5368 5811 -1997 5027 243 112 48 chr5 151357542 151358266 -51727266 - HAL1 LINE L1 -113 2394 1718 2149 118 0 13 chr5 151358266 151358571 -51726961 - AluY SINE Alu -10 301 1 5027 243 112 48 chr5 151358571 151359592 -51725940 - HAL1 LINE L1 -789 1718 470 1837 146 50 73 chr5 151359592 151359989 -51725543 - MLT1B LTR MaLR -2 388 1 5027 243 112 48 chr5 151359989 151360490 -51725042 - HAL1 LINE L1 -2037 470 3 417 317 14 14 chr5 151361378 151361520 -51724012 - MIR SINE MIR -77 185 44 316 241 66 29 chr5 151361714 151361851 -51723681 + L2 LINE L2 2555 2696 -618 1679 210 31 39 chr5 151361853 151362338 -51723194 - L1ME2 LINE L1 0 6233 5753 10136 176 14 15 chr5 151362349 151362436 -51723096 - L1PA16 LINE L1 -10 6156 6070 2329 128 28 14 chr5 151362436 151362795 -51722737 + THE1B LTR MaLR 1 364 0 10136 176 14 15 chr5 151362795 151365368 -51720164 - L1PA16 LINE L1 -96 6070 3495 2726 136 26 7 chr5 151365368 151365786 -51719746 + MSTB LTR MaLR 1 426 0 10136 176 14 15 chr5 151365786 151366145 -51719387 - L1PA16 LINE L1 -2671 3495 3137 440 263 73 11 chr5 151366150 151366329 -51719203 - L1ME2 LINE L1 -479 5754 5565 712 219 67 24 chr5 151366500 151366710 -51718822 - L1ME2 LINE L1 -1225 4990 4772 446 200 63 0 chr5 151366728 151366823 -51718709 - L1MA9 LINE L1 -38 6274 6174 11261 188 49 11 chr5 151366853 151370028 -51715504 - L1MA9 LINE L1 -388 5924 2629 2044 197 24 106 chr5 151370031 151370814 -51714718 - L1ME2 LINE L1 -1433 4782 4064 1318 231 77 104 chr5 151370815 151371364 -51714168 + MLT1E LTR MaLR 7 540 -53 681 226 179 4 chr5 151371365 151371617 -51713915 - L1ME2 LINE L1 -2165 4050 3755 4635 184 22 47 chr5 151371618 151371885 -51713647 - L1MB7 LINE L1 -17 6167 5895 2246 94 0 0 chr5 151371885 151372183 -51713349 - AluSx SINE Alu -14 298 1 4635 184 22 47 chr5 151372183 151373662 -51711870 - L1MB7 LINE L1 -289 5895 4458 839 228 48 148 chr5 151373644 151373805 -51711727 - L1ME2 LINE L1 -2436 3779 3603 * 1016 153 0 23 chr5 151373805 151373982 -51711550 - L1MB7 LINE L1 -18 6166 5994 839 228 48 148 chr5 151373982 151374705 -51710827 - L1ME2 LINE L1 -2612 3603 2984 1068 225 95 52 chr5 151374708 151375363 -51710169 - L1ME2 LINE L1 -3664 2551 1906 4728 223 61 52 chr5 151375449 151376851 -51708681 - L1MC4a LINE L1 0 7808 6395 1383 240 59 9 chr5 151376981 151377447 -51708085 - L1MB7 LINE L1 -2286 3860 3347 206 232 196 14 chr5 151377514 151377671 -51707861 - MIR SINE MIR -31 231 16 210 252 207 59 chr5 151378724 151378771 -51706761 + MIR SINE MIR 60 99 -163 1426 176 61 67 chr5 151378771 151379147 -51706385 + MLT1A2 LTR MaLR 1 374 0 210 252 207 59 chr5 151379147 151379234 -51706298 + MIR SINE MIR 99 214 -48 1334 218 29 5 chr5 151379535 151379896 -51705636 - L1MC/D LINE L1 -743 5403 5080 5274 247 64 34 chr5 151379900 151380840 -51704692 + L1ME1 LINE L1 3454 4364 -1802 2250 80 0 46 chr5 151380840 151381164 -51704368 + AluSq SINE Alu 1 309 -4 5274 247 64 34 chr5 151381164 151382320 -51703212 + L1ME1 LINE L1 4364 5678 -488 216 0 0 0 chr5 151382320 151382344 -51703188 + (TTTAG)n Simple_repeat Simple_repeat 2 25 0 5274 247 64 34 chr5 151382344 151382844 -51702688 + L1ME1 LINE L1 5678 6161 -5 2130 225 136 19 chr5 151382873 151383280 -51702252 + L1ME1 LINE L1 5472 5977 -189 1455 144 131 23 chr5 151383280 151383586 -51701946 + MER44D DNA MER2_type 1 609 0 2130 225 136 19 chr5 151383586 151383796 -51701736 + L1ME1 LINE L1 5977 6161 -5 286 312 106 41 chr5 151384409 151384627 -51700905 - MIR SINE MIR -11 251 20 857 184 76 27 chr5 151385528 151385713 -51699819 - MIR SINE MIR -10 252 59 252 111 0 0 chr5 151386885 151386921 -51698611 + MIR SINE MIR 111 146 -62 492 99 0 0 chr5 151387470 151387541 -51697991 + (TCCA)n Simple_repeat Simple_repeat 2 72 0 263 359 94 0 chr5 151388033 151388139 -51697393 + MIR SINE MIR 38 153 -109 216 116 0 47 chr5 151388618 151388661 -51696871 + (TCCC)n Simple_repeat Simple_repeat 2 42 0 371 229 83 0 chr5 151389148 151389244 -51696288 + MIR SINE MIR 48 151 -111 457 244 103 31 chr5 151390319 151390480 -51695052 + MIR SINE MIR 14 185 -35 430 233 0 11 chr5 151390972 151391062 -51694470 + MIR SINE MIR 63 151 -57 560 232 76 45 chr5 151391405 151391624 -51693908 - MIR SINE MIR -9 253 32 250 254 73 36 chr5 151391727 151391837 -51693695 + L1M4 LINE L1 17 130 -6412 * 518 191 51 10 chr5 151391815 151391948 -51693584 + L1MB5 LINE L1 6012 6145 -519 1888 164 60 23 chr5 151391948 151392372 -51693160 - MLT1D LTR MaLR 0 505 5 1598 218 112 30 chr5 151392377 151392866 -51692666 + L1MB5 LINE L1 6145 6672 0 643 205 215 15 chr5 151392984 151393189 -51692343 + L1MC4 LINE L1 6458 6703 -1339 1828 175 56 0 chr5 151393196 151393516 -51692016 - MER7A DNA MER2_type -4 342 7 2133 212 53 12 chr5 151393543 151394033 -51691499 + L1MC4 LINE L1 6700 7209 -833 345 317 43 43 chr5 151395564 151395725 -51689807 + MIR3 SINE MIR 21 181 -27 302 308 0 11 chr5 151395834 151395925 -51689607 - L1MEc LINE L1 -4915 1395 1306 31 0 0 0 chr5 151395925 151395956 -51689576 + AT_rich Low_complexity Low_complexity 1 31 0 446 264 57 19 chr5 151395960 151396119 -51689413 - L1MEc LINE L1 -4864 1255 1091 288 242 128 128 chr5 151396145 151396434 -51689098 - MLT1I LTR MaLR -64 345 57 288 227 57 0 chr5 151397602 151397690 -51687842 - L1MEc LINE L1 -5982 137 45 379 314 88 20 chr5 151397964 151398165 -51687367 - MIR SINE MIR -22 240 16 2249 92 0 10 chr5 151399181 151399486 -51686046 + AluSq SINE Alu 3 304 -9 471 293 189 11 chr5 151399501 151399692 -51685840 + MIR SINE MIR 28 252 -10 199 399 14 0 chr5 151400786 151400929 -51684603 - MIR SINE MIR -70 192 48 2214 173 60 30 chr5 151401487 151401955 -51683577 + MLT1D LTR MaLR 24 505 0 186 242 58 75 chr5 151402843 151402963 -51682569 + MIR SINE MIR 19 136 -72 383 337 12 47 chr5 151403576 151403748 -51681784 + MIR SINE MIR 11 176 -86 451 234 134 100 chr5 151403763 151404002 -51681530 - MIR SINE MIR -12 250 4 197 244 0 0 chr5 151405453 151405494 -51680038 + MIR SINE MIR 110 150 -58 892 189 99 5 chr5 151406633 151406824 -51678708 + MER3 DNA MER1_type 1 209 0 203 120 173 53 chr5 151407118 151407193 -51678339 - MIR SINE MIR -55 153 70 259 320 0 0 chr5 151407463 151407538 -51677994 - MIR SINE MIR -60 148 74 459 310 46 19 chr5 151408326 151408542 -51676990 + MIR SINE MIR 2 223 -39 231 263 101 92 chr5 151409135 151409473 -51676059 - L2 LINE L2 -105 3167 2827 271 271 136 0 chr5 151409489 151409607 -51675925 + MIR SINE MIR 59 192 -70 734 228 72 16 chr5 151412518 151412711 -51672821 + MIR SINE MIR 22 225 -37 428 309 0 0 chr5 151413778 151413888 -51671644 + MIR SINE MIR 127 236 -26 201 44 22 67 chr5 151414395 151414440 -51671092 + (TTTC)n Simple_repeat Simple_repeat 1 43 0 191 200 0 0 chr5 151416756 151416791 -51668741 - MIR SINE MIR -110 152 118 392 202 246 0 chr5 151418349 151418463 -51667069 - MER5A DNA MER1_type 0 189 48 283 244 191 69 chr5 151419585 151419716 -51665816 + MIR SINE MIR 5 151 -57 193 331 66 44 chr5 151420192 151420373 -51665159 - L2 LINE L2 -95 3177 2993 607 317 96 10 chr5 151420946 151421154 -51664378 + MIR SINE MIR 31 256 -6 234 331 74 20 chr5 151421927 151422075 -51663457 - MIR SINE MIR -47 215 60 261 298 146 51 chr5 151423021 151423199 -51662333 - MIR SINE MIR -39 223 29 228 261 174 0 chr5 151425411 151425503 -51660029 + L1ME4a LINE L1 5957 6064 -57 210 230 95 103 chr5 151426096 151426222 -51659310 - MIR3 SINE MIR -73 135 11 414 379 14 0 chr5 151430643 151430788 -51654744 - MIR SINE MIR -96 166 20 199 152 30 0 chr5 151431045 151431078 -51654454 + MER5A DNA MER1_type 152 185 -4 2239 125 6 3 chr5 151432337 151432648 -51652884 - AluJo SINE Alu 0 312 1 211 311 0 16 chr5 151437013 151437074 -51648458 + MIR3 SINE MIR 143 202 -6 463 273 58 19 chr5 151441986 151442191 -51643341 + Charlie2b DNA MER1_type 9 221 -2561 711 298 16 8 chr5 151442228 151442476 -51643056 + Charlie2b DNA MER1_type 390 639 -2143 1359 201 116 27 chr5 151442570 151443009 -51642523 + Charlie2a DNA MER1_type 1509 1986 -876 759 181 13 7 chr5 151443018 151443173 -51642359 + L1MD3 LINE L1 7822 7977 -18 1556 216 135 18 chr5 151443175 151443730 -51641802 + Charlie2a DNA MER1_type 1975 2594 -268 223 359 145 0 chr5 151443751 151443868 -51641664 + MIR SINE MIR 11 144 -118 557 153 198 18 chr5 151443875 151443986 -51641546 + AluJ SINE Alu 3 133 -179 4398 29 23 0 chr5 151444297 151444852 -51640680 - L1PA6 LINE L1 -333 5821 5254 2441 42 0 101 chr5 151444863 151445220 -51640312 + L1PA6 LINE L1 5830 6150 -4 477 225 25 0 chr5 151445929 151446049 -51639483 + Charlie4 DNA MER1_type 1837 1959 -2 584 293 200 6 chr5 151446082 151446417 -51639115 + L2 LINE L2 2910 3309 -4 268 291 95 25 chr5 151446510 151446668 -51638864 + L1MC/D LINE L1 5591 5759 -2049 1794 169 58 22 chr5 151446673 151447035 -51638497 + THE1C LTR MaLR 1 375 0 524 226 265 6 chr5 151447156 151447337 -51638195 - MIR SINE MIR -33 229 2 24 0 0 0 chr5 151447358 151447382 -51638150 + AT_rich Low_complexity Low_complexity 1 24 0 292 248 62 18 chr5 151447621 151447734 -51637798 - MIR SINE MIR -64 144 27 479 331 41 0 chr5 151451067 151451239 -51634293 - MIR3 SINE MIR 0 208 30 618 281 129 27 chr5 151451506 151451840 -51633692 + L1MC4 LINE L1 7602 7969 -73 809 142 66 3 chr5 151451867 151452166 -51633366 + L1MA7 LINE L1 5821 6184 -107 461 260 120 10 chr5 151457379 151457571 -51627961 + MIR SINE MIR 6 218 -44 469 215 158 43 chr5 151459359 151459575 -51625957 + MIR SINE MIR 9 246 -16 268 319 62 23 chr5 151461813 151462167 -51623365 + L1M4 LINE L1 4789 5156 -990 1043 194 0 11 chr5 151462233 151462408 -51623124 + AluJ SINE Alu 118 290 -22 411 273 70 51 chr5 151462424 151462739 -51622793 + L1MEd LINE L1 895 1215 -4904 1340 249 9 3 chr5 151463192 151463522 -51622010 + L1M4 LINE L1 4901 5232 -914 429 0 32 16 chr5 151464470 151464532 -51621000 + (TG)n Simple_repeat Simple_repeat 2 64 0 574 279 153 0 chr5 151465487 151465709 -51619823 - MIR SINE MIR -2 260 5 533 245 67 97 chr5 151466460 151466758 -51618774 + L2 LINE L2 2966 3254 -18 28 29 0 0 chr5 151467235 151467270 -51618262 + AT_rich Low_complexity Low_complexity 1 35 0 310 330 37 16 chr5 151467746 151467915 -51617617 - MIR SINE MIR -57 205 34 256 328 76 15 chr5 151468392 151468523 -51617009 + MIR3 SINE MIR 18 156 -52 1431 259 127 82 chr5 151468585 151469625 -51615907 + L1MC4a LINE L1 6721 7807 -1 214 331 32 24 chr5 151472326 151472450 -51613082 + L2 LINE L2 2214 2338 -976 194 301 116 20 chr5 151472776 151472922 -51612610 + L2 LINE L2 2843 3002 -270 679 323 10 0 chr5 151473514 151473712 -51611820 + MIR SINE MIR 8 207 -55 1021 240 194 14 chr5 151473829 151474196 -51611336 - MLT1J2 LTR MaLR -17 433 1 207 308 0 15 chr5 151475561 151475626 -51609906 + L2 LINE L2 3184 3247 -25 310 326 171 29 chr5 151477263 151477607 -51607925 + L2 LINE L2 2874 3266 -6 22 70 0 0 chr5 151479958 151480001 -51605531 + GC_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr5 151480074 151480125 -51605407 + GC_rich Low_complexity Low_complexity 1 51 0 190 167 62 0 chr5 151480880 151480928 -51604604 + MIR SINE MIR 138 188 -74 1131 311 85 15 chr5 151481084 151481544 -51603988 - L2 LINE L2 0 3313 2822 4234 171 27 13 chr5 151482263 151483156 -51602376 - Charlie1a DNA MER1_type -12 1443 539 568 134 219 8 chr5 151483163 151483282 -51602250 + ORSL DNA AcHobo 2 145 -130 253 231 0 31 chr5 151483311 151483376 -51602156 - Charlie1a DNA MER1_type -918 537 475 * 1041 157 100 32 chr5 151483353 151483602 -51601930 - ORSL DNA AcHobo -9 266 1 2153 197 43 41 chr5 151483602 151484109 -51601423 - Charlie1a DNA MER1_type -947 508 1 1255 153 5 0 chr5 151484222 151484411 -51601121 + AluSx SINE Alu 1 190 -122 1296 178 29 32 chr5 151484633 151484858 -51600674 + Charlie1a DNA MER1_type 12 237 -2524 405 0 0 0 chr5 151484858 151484903 -51600629 + (CA)n Simple_repeat Simple_repeat 1 45 0 1296 178 29 32 chr5 151484903 151484958 -51600574 + Charlie1a DNA MER1_type 237 291 -1164 2090 154 36 3 chr5 151484964 151485354 -51600178 + Charlie1a DNA MER1_type 643 1045 -410 2558 53 0 3 chr5 151485371 151485674 -51599858 + AluY SINE Alu 1 302 -9 1502 176 24 110 chr5 151485768 151486177 -51599355 - MLT1A2 LTR MaLR 0 374 1 1980 147 3 13 chr5 151486193 151486505 -51599027 + AluJb SINE Alu 1 309 -3 3477 260 62 23 chr5 151486521 151487937 -51597595 + L1MC4a LINE L1 5305 6618 -1190 522 254 68 23 chr5 151487927 151488278 -51597254 - L1M4 LINE L1 -2685 3461 3095 * 1510 214 26 24 chr5 151488277 151488656 -51596876 - L1ME3A LINE L1 0 6170 5791 1063 189 64 149 chr5 151488659 151488770 -51596762 - L1ME3A LINE L1 -982 5164 5045 1827 161 9 28 chr5 151488770 151489087 -51596445 - AluSx SINE Alu -1 311 1 1063 189 64 149 chr5 151489087 151489335 -51596197 - L1ME3A LINE L1 -1101 5045 4871 11072 40 11 51 chr5 151489335 151490768 -51594764 + SVA Other Other 2 1377 -9 1063 189 64 149 chr5 151490768 151490989 -51594543 - L1ME3A LINE L1 -1275 4871 4633 1771 149 14 7 chr5 151591008 151591296 -51494236 + AluJb SINE Alu 12 301 -11 2044 121 0 21 chr5 151591317 151591633 -51493899 + AluSx SINE Alu 1 310 0 2143 130 0 9 chr5 151591633 151591948 -51493584 + AluSq SINE Alu 2 313 0 339 191 48 12 chr5 151592567 151592651 -51492881 + MIR SINE MIR 88 174 -88 230 303 26 0 chr5 151592747 151592823 -51492709 - L2 LINE L2 -11 3261 3184 1069 157 0 18 chr5 151593470 151593636 -51491896 - AluSx SINE Alu -149 163 1 1349 174 46 128 chr5 151593636 151593963 -51491569 - AluJo SINE Alu -12 300 1 2512 65 7 3 chr5 151594203 151594512 -51491020 + AluY SINE Alu 1 310 -1 328 319 55 35 chr5 151594802 151595059 -51490473 - L2 LINE L2 -531 2783 2522 472 149 6 25 chr5 151595715 151595815 -51489717 - L1MB7 LINE L1 -1 6177 6077 1755 163 7 39 chr5 151596301 151596608 -51488924 + AluJo SINE Alu 5 301 -11 376 60 20 0 chr5 151596617 151596667 -51488865 + MER66A LTR ERV1 287 337 -141 2355 93 0 0 chr5 151597423 151597714 -51487818 - AluSg SINE Alu -19 291 1 234 333 9 29 chr5 151597779 151597884 -51487648 - MIR SINE MIR -90 118 16 538 311 75 28 chr5 151598263 151598623 -51486909 - L3 LINE CR1 -68 1509 1133 566 303 50 25 chr5 151598744 151598985 -51486547 - MIR SINE MIR -1 261 15 223 176 176 0 chr5 151600350 151600418 -51485114 - MIR SINE MIR -11 251 172 315 0 0 0 chr5 151601727 151601762 -51483770 + (TTA)n Simple_repeat Simple_repeat 2 36 0 305 121 103 0 chr5 151601764 151601822 -51483710 - Alu SINE Alu -16 284 221 461 312 50 68 chr5 151602119 151602500 -51483032 + L2 LINE L2 2876 3249 -23 207 0 0 0 chr5 151604286 151604309 -51481223 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 29 28 0 0 chr5 151605160 151605196 -51480336 + AT_rich Low_complexity Low_complexity 1 36 0 2450 82 7 0 chr5 151605909 151606214 -51479318 - AluSx SINE Alu -5 307 1 1127 150 4 101 chr5 151608223 151608470 -51477062 + L1PB4 LINE L1 5929 6151 -5 446 110 0 66 chr5 151608471 151608562 -51476970 + L1PB4 LINE L1 6072 6156 0 629 81 0 12 chr5 151608659 151608770 -51476762 + L1PA3 LINE L1 6022 6129 -26 681 204 24 42 chr5 151608871 151609038 -51476494 - AluSq SINE Alu -149 164 1 394 193 18 37 chr5 151609118 151609227 -51476305 - L1ME4a LINE L1 -73 6048 5942 234 295 101 22 chr5 151609399 151609538 -51475994 - L1ME4a LINE L1 -402 5719 5570 997 143 0 0 chr5 151611872 151612005 -51473527 + AluSq/x SINE Alu 1 133 -180 2058 118 50 3 chr5 151612014 151612311 -51473221 + AluSx SINE Alu 1 311 -1 498 204 40 46 chr5 151613008 151613160 -51472372 + MER3 DNA MER1_type 15 165 -44 365 178 59 10 chr5 151613301 151613402 -51472130 - L1MB7 LINE L1 -162 6022 5917 1213 157 22 39 chr5 151613658 151613888 -51471644 + AluJo SINE Alu 87 312 0 1816 172 3 19 chr5 151615889 151616197 -51469335 - AluJo SINE Alu -9 303 1 247 245 64 11 chr5 151617347 151617441 -51468091 + LTR67 LTR ERVL 458 556 -1 245 325 48 44 chr5 151617530 151617645 -51467887 + MIR SINE MIR 40 153 -64 1798 78 123 11 chr5 151617661 151617929 -51467603 + AluSx SINE Alu 1 298 -14 264 300 42 67 chr5 151618428 151618548 -51466984 + L2 LINE L2 3124 3240 -32 2143 121 7 0 chr5 151618978 151619275 -51466257 + AluSx SINE Alu 3 301 -11 253 167 0 0 chr5 151619379 151619421 -51466111 - L2 LINE L2 -4 3309 3268 183 261 0 22 chr5 151619387 151619433 -51466099 - MIR SINE MIR -6 256 212 * 519 200 75 8 chr5 151619568 151619688 -51465844 - MIR SINE MIR -27 235 108 234 0 0 0 chr5 151620634 151620660 -51464872 + (T)n Simple_repeat Simple_repeat 1 26 0 209 279 29 0 chr5 151621568 151621636 -51463896 - L2 LINE L2 0 3272 3203 236 318 110 58 chr5 151621881 151621911 -51463621 - MIR3 SINE MIR -11 197 170 2249 104 0 0 chr5 151621911 151622209 -51463323 + AluSq SINE Alu 1 298 -15 236 318 110 58 chr5 151622209 151622332 -51463200 - MIR3 SINE MIR -38 170 36 28 0 0 47 chr5 151623084 151623102 -51462430 + AT_rich Low_complexity Low_complexity 1 18 -23 2434 69 3 0 chr5 151623102 151623407 -51462125 + AluSp SINE Alu 1 306 -7 28 0 0 47 chr5 151623407 151623431 -51462101 + AT_rich Low_complexity Low_complexity 18 41 0 2031 134 0 3 chr5 151623832 151624138 -51461394 - AluJb SINE Alu -7 305 1 440 281 46 36 chr5 151628454 151628650 -51456882 - L1ME3A LINE L1 0 6170 5973 315 285 102 24 chr5 151628697 151628866 -51456666 - L1ME3A LINE L1 -170 5992 5806 2299 98 0 7 chr5 151629579 151629885 -51455647 + AluSx SINE Alu 1 304 -8 317 297 11 0 chr5 151630294 151630385 -51455147 + MIR3 SINE MIR 88 179 -29 331 316 0 0 chr5 151630575 151630673 -51454859 + MIR3 SINE MIR 111 208 0 439 244 20 114 chr5 151630704 151630905 -51454627 - MIR SINE MIR -36 226 45 357 197 55 158 chr5 151631345 151631528 -51454004 - MIR SINE MIR -48 214 51 230 262 215 9 chr5 151631682 151631789 -51453743 + L2 LINE L2 3139 3267 -5 182 387 9 54 chr5 151631949 151631981 -51453551 + MIR SINE MIR 2 34 -228 2236 106 3 3 chr5 151631981 151632292 -51453240 + AluSq SINE Alu 1 311 -2 182 387 9 54 chr5 151632292 151632370 -51453162 + MIR SINE MIR 34 107 -155 641 129 0 0 chr5 151632509 151632602 -51452930 + AluSg/x SINE Alu 206 298 -11 306 122 0 54 chr5 151633033 151633107 -51452425 + (TTCTCC)n Simple_repeat Simple_repeat 3 72 0 2193 84 7 3 chr5 151633960 151634256 -51451276 + AluSx SINE Alu 1 297 -15 2174 79 0 17 chr5 151634256 151634581 -51450951 + AluSq SINE Alu 1 321 0 275 356 142 10 chr5 151636998 151637307 -51448225 + L2 LINE L2 2527 2876 -438 297 307 98 26 chr5 151637357 151637510 -51448022 + L2 LINE L2 3025 3188 -84 320 322 126 23 chr5 151638441 151638615 -51446917 - MIR SINE MIR -66 196 5 1271 105 0 0 chr5 151638937 151639108 -51446424 + AluSg/x SINE Alu 131 301 -11 2380 62 10 0 chr5 151640830 151641134 -51444398 + AluY SINE Alu 1 307 -4 35 63 0 0 chr5 151641639 151641702 -51443830 + GC_rich Low_complexity Low_complexity 1 63 0 1025 245 31 16 chr5 151644341 151644598 -51440934 - MIR SINE MIR -1 261 1 237 288 58 79 chr5 151645942 151646081 -51439451 - MIR SINE MIR -92 170 35 2919 239 189 2 chr5 151646181 151646247 -51439285 - L2 LINE L2 -446 2868 2816 1837 143 0 23 chr5 151646247 151646547 -51438985 - AluJo SINE Alu -19 293 1 2919 239 189 2 chr5 151646547 151647509 -51438023 - L2 LINE L2 -498 2816 1648 182 269 87 77 chr5 151648010 151648114 -51437418 - MIR SINE MIR -112 150 46 2427 76 0 9 chr5 151648427 151648742 -51436790 + AluSx SINE Alu 1 312 0 227 308 58 42 chr5 151650174 151650294 -51435238 - L3 LINE CR1 -87 1490 1369 192 222 22 0 chr5 151650893 151650938 -51434594 - L2 LINE L2 -3 3310 3265 586 207 215 3 chr5 151650983 151651154 -51434378 - MIR SINE MIR -20 242 50 239 330 10 21 chr5 151651944 151652041 -51433491 - MIR SINE MIR -87 175 80 313 330 77 67 chr5 151652100 151652385 -51433147 + L2 LINE L2 2873 3160 -112 491 267 20 53 chr5 151652689 151652839 -51432693 - MER91A DNA MER1_type 0 196 52 390 250 30 0 chr5 151654126 151654226 -51431306 - MIR SINE MIR -121 141 39 508 284 40 7 chr5 151655065 151655213 -51430319 + MIR SINE MIR 66 218 -44 180 327 79 0 chr5 151656115 151656216 -51429316 - MIR3 SINE MIR -39 169 61 253 215 138 0 chr5 151657073 151657138 -51428394 + MIR SINE MIR 80 153 -109 195 253 67 13 chr5 151657734 151657809 -51427723 - MIR3 SINE MIR -26 182 104 426 308 9 0 chr5 151658525 151658632 -51426900 + L2 LINE L2 3163 3270 -2 574 287 76 40 chr5 151658649 151658724 -51426808 - MIR SINE MIR -12 250 179 2314 82 0 0 chr5 151658724 151659017 -51426515 + AluSg SINE Alu 5 297 -13 574 287 76 40 chr5 151659017 151659164 -51426368 - MIR SINE MIR -83 179 20 362 241 263 0 chr5 151660050 151660183 -51425349 - MIR SINE MIR -59 203 36 226 341 167 16 chr5 151662412 151662658 -51422874 + L2 LINE L2 2491 2773 -541 454 265 53 15 chr5 151662799 151662931 -51422601 + MIR SINE MIR 63 199 -63 222 91 0 0 chr5 151663270 151663303 -51422229 + (AGCTG)n Simple_repeat Simple_repeat 4 36 0 258 32 0 0 chr5 151664120 151664151 -51421381 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 319 301 58 58 chr5 151664534 151664707 -51420825 - MIR SINE MIR -16 246 74 696 299 69 33 chr5 151665281 151665801 -51419731 - L2 LINE L2 -14 3299 2711 2002 133 33 0 chr5 151665801 151666102 -51419430 + AluSx SINE Alu 1 311 -1 696 299 69 33 chr5 151666102 151666178 -51419354 - L2 LINE L2 -602 2711 2639 510 256 17 50 chr5 151666971 151667151 -51418381 + MER117 DNA MER1_type 4 177 -20 296 301 36 91 chr5 151668419 151668638 -51416894 + L2 LINE L2 3014 3220 -52 251 304 0 0 chr5 151669256 151669325 -51416207 - MIR SINE MIR -56 152 84 966 235 17 42 chr5 151669425 151669663 -51415869 - MIR SINE MIR -14 248 17 246 200 40 0 chr5 151670022 151670072 -51415460 + MIR SINE MIR 194 245 -17 303 267 78 11 chr5 151671109 151671199 -51414333 + MIR SINE MIR 46 141 -121 663 221 156 0 chr5 151671486 151671640 -51413892 - MER5A DNA MER1_type -1 188 11 391 254 10 115 chr5 151673481 151673690 -51411842 - MLT1J2 LTR MaLR 0 450 264 627 283 49 22 chr5 151674021 151674244 -51411288 - MIR SINE MIR -11 251 23 489 282 6 25 chr5 151674638 151674801 -51410731 - MER63A DNA MER1_type -3 207 48 503 302 123 17 chr5 151674890 151675125 -51410407 - MIR SINE MIR 0 262 3 415 302 44 22 chr5 151675136 151675318 -51410214 + MER5A DNA MER1_type 1 186 -3 343 233 63 31 chr5 151676411 151676570 -51408962 + L1MC5 LINE L1 7762 7925 -36 291 28 0 0 chr5 151676768 151676804 -51408728 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 787 229 49 132 chr5 151676812 151677423 -51408109 - L2 LINE L2 -13 3300 2719 182 271 136 0 chr5 151678218 151678277 -51407255 - MIR SINE MIR -16 246 180 272 296 11 23 chr5 151679096 151679184 -51406348 - MIR SINE MIR -143 119 33 478 296 43 19 chr5 151679360 151679522 -51406010 - MIR SINE MIR -41 221 56 3041 214 86 39 chr5 151679879 151680990 -51404542 - L1ME2 LINE L1 -22 6142 4986 358 274 10 0 chr5 151682182 151682284 -51403248 + MER103 DNA DNA 21 123 -43 1920 218 29 18 chr5 151682336 151682790 -51402742 - MLT1C LTR MaLR -3 464 6 421 279 144 30 chr5 151682838 151683039 -51402493 + MIR SINE MIR 14 237 -25 273 297 27 14 chr5 151684570 151684644 -51400888 + L2 LINE L2 3234 3308 -5 2157 103 36 0 chr5 151684678 151684979 -51400553 - AluSx SINE Alu 0 312 1 1186 79 17 28 chr5 151685522 151685700 -51399832 + HERVH LTR ERV1 7538 7713 0 1993 105 44 9 chr5 151685700 151686086 -51399446 + LTR7 LTR ERV1 1 448 -2 339 294 161 0 chr5 151686103 151686246 -51399286 + MIR SINE MIR 5 170 -92 2064 58 4 0 chr5 151686251 151686509 -51399023 - THE1B-int LTR MaLR -1316 264 6 2138 131 47 36 chr5 151686513 151686873 -51398659 - THE1B LTR MaLR 0 364 1 516 59 0 0 chr5 151688189 151688257 -51397275 + (TG)n Simple_repeat Simple_repeat 2 69 0 326 339 39 60 chr5 151688402 151688705 -51396827 + L1MC4a LINE L1 5620 5738 -383 2099 97 3 3 chr5 151688812 151689111 -51396421 - AluSx SINE Alu -13 299 1 2366 219 59 8 chr5 151689141 151689784 -51395748 + L1MD1 LINE L1 4590 5265 -881 304 197 16 16 chr5 151689838 151689899 -51395633 - L1MC4 LINE L1 -1368 6674 6614 5717 133 31 5 chr5 151689922 151690849 -51394683 + L1MD1 LINE L1 5290 6240 -2 547 288 256 9 chr5 151691598 151691938 -51393594 + L2 LINE L2 2886 3309 -4 340 325 9 9 chr5 151692354 151692468 -51393064 + MIR3 SINE MIR 15 128 -80 534 247 104 28 chr5 151692736 151692918 -51392614 + MIR SINE MIR 65 260 -2 331 288 199 48 chr5 151693256 151693548 -51391984 + L1ME4a LINE L1 5756 6091 -30 306 0 0 0 chr5 151693670 151693704 -51391828 + (TG)n Simple_repeat Simple_repeat 1 34 0 195 69 0 0 chr5 151693704 151693733 -51391799 + (GA)n Simple_repeat Simple_repeat 2 30 0 545 264 41 51 chr5 151694358 151694555 -51390977 - MIR SINE MIR -19 243 49 2194 107 7 3 chr5 151695582 151695892 -51389640 + AluSx SINE Alu 1 311 -1 999 103 0 0 chr5 151695906 151696051 -51389481 + AluSg/x SINE Alu 164 308 -4 2601 170 92 8 chr5 151697914 151698437 -51387095 - L1MD2 LINE L1 -1 6358 5792 312 241 131 35 chr5 151698486 151698631 -51386901 - MIR SINE MIR 0 262 104 1043 148 0 0 chr5 151698908 151699077 -51386455 + AluSg/x SINE Alu 132 300 -12 1205 229 63 48 chr5 151699202 151699660 -51385872 - MLT1C LTR MaLR -2 465 1 205 239 184 86 chr5 151699782 151699945 -51385587 + L3 LINE CR1 1265 1443 -134 2191 84 0 7 chr5 151700883 151701181 -51384351 - AluY SINE Alu -13 298 3 498 255 10 0 chr5 151701573 151701675 -51383857 - MER81 DNA DNA 0 114 12 22 0 0 0 chr5 151702253 151702275 -51383257 + AT_rich Low_complexity Low_complexity 1 22 0 337 360 9 0 chr5 151702404 151702518 -51383014 + MIR SINE MIR 18 132 -76 189 256 0 0 chr5 151703018 151703057 -51382475 - MIR SINE MIR -62 146 108 717 193 0 0 chr5 151703068 151703182 -51382350 - MER81 DNA DNA 0 114 1 569 257 197 0 chr5 151704103 151704321 -51381211 + MIR SINE MIR 2 262 0 1875 167 81 19 chr5 151704913 151705332 -51380200 + L1MB2 LINE L1 5726 6170 -1 304 242 0 19 chr5 151706367 151706528 -51379004 + (TCCA)n Simple_repeat Simple_repeat 3 160 0 266 340 122 21 chr5 151706530 151706902 -51378630 - L2 LINE L2 -6 3266 2790 442 272 101 0 chr5 151706951 151707109 -51378423 - MIR SINE MIR -42 220 47 205 206 88 15 chr5 151707366 151707434 -51378098 + L3b LINE CR1 1306 1378 -205 2128 96 31 0 chr5 151707496 151707788 -51377744 + AluSq SINE Alu 1 301 -12 28 61 0 0 chr5 151707871 151707920 -51377612 + AT_rich Low_complexity Low_complexity 1 49 0 1493 274 76 19 chr5 151707920 151708515 -51377017 + L1MC4a LINE L1 5264 5892 -1916 861 250 78 7 chr5 151708555 151708886 -51376646 + LTR16A LTR ERVL 57 446 -4 300 221 117 0 chr5 151710700 151710777 -51374755 - L1MCa LINE L1 -4346 2080 1995 4438 230 41 21 chr5 151710868 151711946 -51373586 + L1ME1 LINE L1 59 1165 -5231 2012 106 40 0 chr5 151711946 151712247 -51373285 + AluSp SINE Alu 1 313 0 4438 230 41 21 chr5 151712247 151712395 -51373137 + L1ME1 LINE L1 1165 1309 -5087 2588 118 3 3 chr5 151712395 151712759 -51372773 + THE1B LTR MaLR 1 364 0 228 237 51 59 chr5 151712874 151712992 -51372540 + L1ME1 LINE L1 4714 4830 -1385 15747 193 30 10 chr5 151712994 151717087 -51368445 + L1MA3 LINE L1 2 4175 -2673 4964 153 90 38 chr5 151717090 151719105 -51366427 + L1MA3 LINE L1 4901 7001 -6 3320 219 41 33 chr5 151719104 151720535 -51364997 + L1ME1 LINE L1 4797 6231 -4 * 618 299 47 19 chr5 151722582 151722796 -51362736 - MIR SINE MIR -27 235 16 338 274 12 12 chr5 151723026 151723110 -51362422 - MIR SINE MIR -84 124 41 1437 243 21 21 chr5 151723520 151723907 -51361625 + LTR16C LTR ERVL 96 482 -9 203 341 136 30 chr5 151724580 151724712 -51360820 + L2 LINE L2 3110 3255 -17 203 280 10 80 chr5 151725491 151725591 -51359941 - L2 LINE L2 -2 3311 3219 315 0 0 0 chr5 151726551 151726586 -51358946 + (TC)n Simple_repeat Simple_repeat 2 36 0 225 253 131 23 chr5 151726985 151727113 -51358419 - MIR SINE MIR -61 147 41 5894 128 39 7 chr5 151727541 151727773 -51357759 + L1PB3 LINE L1 4873 5096 -1058 186 71 0 0 chr5 151727773 151727801 -51357731 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5894 128 39 7 chr5 151727801 151728802 -51356730 + L1PB3 LINE L1 5096 6154 0 948 202 56 28 chr5 151729742 151729955 -51355577 + MER20 DNA MER1_type 1 219 0 191 231 0 0 chr5 151730624 151730663 -51354869 - MIR SINE MIR -191 71 33 662 298 139 53 chr5 151731011 151731619 -51353913 + L1MC4a LINE L1 5356 6017 -104 294 125 21 0 chr5 151732315 151732363 -51353169 - MIR SINE MIR -4 258 210 541 187 240 0 chr5 151732367 151732517 -51353015 + MER5A DNA MER1_type 4 189 0 * 734 290 18 22 chr5 151732517 151732733 -51352799 - MIR SINE MIR -46 216 2 275 219 16 0 chr5 151732851 151732915 -51352617 + L1MD1 LINE L1 5943 6007 -352 914 163 82 0 chr5 151732917 151733101 -51352431 + L1MD1 LINE L1 6044 6242 0 2177 133 127 16 chr5 151733249 151733634 -51351898 + MSTA LTR MaLR 1 428 0 9144 139 30 38 chr5 151733637 151735224 -51350308 + MSTA-int LTR MaLR 3 1576 -4 821 140 168 0 chr5 151735228 151735371 -51350161 + MSTA LTR MaLR 1 167 -261 1973 183 62 33 chr5 151736249 151736703 -51348829 - MLT1C LTR MaLR 0 467 1 568 239 15 15 chr5 151737851 151737981 -51347551 + MIR SINE MIR 98 227 -35 284 313 10 42 chr5 151738285 151738381 -51347151 - L2 LINE L2 -8 3305 3213 1411 161 103 0 chr5 151738397 151738639 -51346893 - MLT2C1 LTR ERVL -129 268 2 665 260 9 40 chr5 151738648 151738871 -51346661 + MLT2F LTR ERVL 448 663 0 524 310 33 16 chr5 151738882 151739066 -51346466 + ERVL LTR ERVL 4608 4794 -970 4106 257 32 12 chr5 151739621 151740015 -51345517 - ERVL LTR ERVL -364 5400 5015 1618 196 80 30 chr5 151740015 151740388 -51345144 - MSTD LTR MaLR 0 396 5 4106 257 32 12 chr5 151740388 151741502 -51344030 - ERVL LTR ERVL -749 5015 3799 1657 190 103 112 chr5 151741505 151742272 -51343260 - LTR41 LTR ERVL -11 762 3 349 289 44 25 chr5 151743551 151743710 -51341822 + L2 LINE L2 2909 3070 -202 187 368 0 0 chr5 151743822 151743879 -51341653 + L2 LINE L2 3252 3308 -5 353 254 45 9 chr5 151744621 151744731 -51340801 - MIR SINE MIR -73 135 22 546 215 44 19 chr5 151745888 151746046 -51339486 + L1MD3 LINE L1 7698 7859 -136 2279 118 43 109 chr5 151746079 151746563 -51338969 - L1MA9 LINE L1 -2 6310 5859 360 0 0 0 chr5 151746569 151746609 -51338923 + (TA)n Simple_repeat Simple_repeat 1 40 0 414 235 31 0 chr5 151746687 151746785 -51338747 - MIR SINE MIR -51 211 111 599 286 167 24 chr5 151748557 151748767 -51336765 + MIR SINE MIR 20 259 -3 218 333 92 49 chr5 151748861 151749196 -51336336 + L2 LINE L2 2712 3093 -179 722 241 150 10 chr5 151749283 151749490 -51336042 + MIR SINE MIR 20 255 -7 455 302 146 19 chr5 151751894 151752106 -51333426 + L2 LINE L2 2125 2363 -951 2417 226 21 21 chr5 151752106 151752764 -51332768 - L1M4 LINE L1 -1835 4311 3654 1136 279 80 16 chr5 151752767 151753456 -51332076 - L1MEc LINE L1 -4942 1454 722 970 215 141 11 chr5 151754495 151754779 -51330753 - HsTC2c DNA Tc2 -5 724 404 1118 221 146 65 chr5 151754934 151755319 -51330213 - HsTC2c DNA Tc2 -310 419 4 252 0 0 0 chr5 151755397 151755425 -51330107 + (CAA)n Simple_repeat Simple_repeat 3 30 0 322 244 109 42 chr5 151756961 151757080 -51328452 + L2 LINE L2 3141 3267 -5 372 266 19 91 chr5 151757411 151757471 -51328061 + L3 LINE CR1 1407 1470 -107 1118 203 14 0 chr5 151757471 151757678 -51327854 - MER63A DNA MER1_type 0 210 1 372 266 19 91 chr5 151757678 151757771 -51327761 + L3 LINE CR1 1470 1549 -28 22 56 0 0 chr5 151759363 151759399 -51326133 + AT_rich Low_complexity Low_complexity 1 36 0 1414 190 78 43 chr5 151759623 151759996 -51325536 - MLT1B LTR MaLR -4 386 1 507 343 54 32 chr5 151760765 151761138 -51324394 + L2 LINE L2 2463 2843 -471 2184 107 7 0 chr5 151762371 151762681 -51322851 + AluSx SINE Alu 1 312 0 1222 225 44 72 chr5 151763318 151763749 -51321783 + LTR16C LTR ERVL 1 419 -72 199 232 0 54 chr5 151764076 151764132 -51321400 + L3 LINE CR1 1518 1570 -7 210 219 0 0 chr5 151764471 151764512 -51321020 + GA-rich Low_complexity Low_complexity 2 42 0 190 312 58 78 chr5 151765124 151765329 -51320203 + L2 LINE L2 2985 3185 -87 1312 233 91 47 chr5 151765659 151766152 -51319380 - LTR33A LTR ERVL 0 523 9 195 139 0 0 chr5 151766696 151766732 -51318800 + (CA)n Simple_repeat Simple_repeat 1 36 0 243 323 115 0 chr5 151767991 151768121 -51317411 + L2 LINE L2 2913 3057 -215 277 229 31 31 chr5 151768716 151768812 -51316720 + MER113 DNA MER1_type? 1 96 -425 341 264 73 84 chr5 151769537 151769715 -51315817 - MIR SINE MIR -1 261 86 1688 265 78 29 chr5 151770510 151771314 -51314218 - L1ME4a LINE L1 -11 6110 5267 294 226 128 20 chr5 151771452 151771554 -51313978 - MER5A DNA MER1_type -76 113 1 515 321 120 36 chr5 151771554 151771912 -51313620 - L1ME4a LINE L1 -1169 4977 4590 527 289 243 0 chr5 151771952 151772125 -51313407 - MIR SINE MIR 0 262 48 14125 175 55 26 chr5 151772196 151776502 -51309030 + L1MA4A LINE L1 1 4182 -2823 9552 169 15 13 chr5 151776502 151778148 -51307384 - MSTA-int LTR MaLR -1 1650 1 2188 132 132 5 chr5 151778148 151778528 -51307004 - MSTA LTR MaLR 0 428 1 14125 175 55 26 chr5 151778528 151781027 -51304505 + L1MA4A LINE L1 4181 7001 -4 345 305 96 50 chr5 151781025 151781527 -51304005 - L1ME4a LINE L1 -1601 4545 4021 * 953 184 0 0 chr5 151781545 151781719 -51303813 - AluSg/x SINE Alu -10 302 129 212 0 36 0 chr5 151781719 151781747 -51303785 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1864 120 60 20 chr5 151781750 151782050 -51303482 - AluSx SINE Alu 0 312 1 324 305 92 40 chr5 151783373 151783547 -51301985 - L1MC4a LINE L1 -1755 6053 5871 647 306 70 51 chr5 151783662 151784018 -51301514 + L2 LINE L2 2950 3312 -1 260 367 39 16 chr5 151784097 151784225 -51301307 - MIR SINE MIR -112 150 20 403 290 24 0 chr5 151785009 151785133 -51300399 + MER94 DNA DNA 8 134 0 427 294 25 43 chr5 151785190 151785422 -51300110 - MIR SINE MIR -12 250 30 234 333 37 0 chr5 151785761 151785842 -51299690 + L2 LINE L2 3162 3245 -27 195 218 0 0 chr5 151785869 151785924 -51299608 + (CATG)n Simple_repeat Simple_repeat 1 55 0 336 311 41 14 chr5 151786629 151786784 -51298748 + MIR SINE MIR 37 192 -67 21 0 0 0 chr5 151788091 151788112 -51297420 + AT_rich Low_complexity Low_complexity 1 21 0 619 271 195 0 chr5 151788269 151788479 -51297053 - MIR SINE MIR -10 252 2 259 284 165 0 chr5 151788824 151788933 -51296599 + MIR SINE MIR 61 187 -75 507 265 93 7 chr5 151789110 151789261 -51296271 + MIR SINE MIR 86 249 -13 2062 66 0 0 chr5 151790404 151790663 -51294869 + L1PA5 LINE L1 5895 6153 -1 494 304 75 18 chr5 151791251 151791478 -51294054 - MIR SINE MIR -7 255 16 2191 94 0 28 chr5 151792289 151792607 -51292925 + AluSg SINE Alu 2 310 0 360 243 108 0 chr5 151792620 151792731 -51292801 - L2 LINE L2 -24 3289 3167 285 75 0 0 chr5 151793542 151793582 -51291950 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 242 307 70 67 chr5 151794010 151794133 -51291399 - L2 LINE L2 -648 2666 2545 2715 219 70 23 chr5 151794133 151794821 -51290711 + MER72 LTR ERV1 3 722 0 242 307 70 67 chr5 151794821 151794997 -51290535 - L2 LINE L2 -769 2545 2366 2090 127 0 0 chr5 151795227 151795556 -51289976 - AluSx SINE Alu 0 329 1 312 311 11 11 chr5 151795594 151795684 -51289848 + LTR67 LTR ERVL 116 205 -352 326 167 0 83 chr5 151796079 151796163 -51289369 - MIR SINE MIR -30 232 156 198 156 44 67 chr5 151796147 151796192 -51289340 + MIR SINE MIR 73 116 -146 * 470 221 206 34 chr5 151796202 151796406 -51289126 - MIR SINE MIR -20 242 4 571 287 114 19 chr5 151797442 151797686 -51287846 - MIR SINE MIR 0 262 2 324 251 102 0 chr5 151798276 151798384 -51287148 + MIR SINE MIR 30 153 -66 494 255 124 12 chr5 151798722 151798883 -51286649 - MIR SINE MIR -70 192 14 301 304 176 0 chr5 151799231 151799333 -51286199 - L2 LINE L2 -1 3271 3152 183 114 0 0 chr5 151800582 151800617 -51284915 + (TC)n Simple_repeat Simple_repeat 1 35 0 225 224 159 28 chr5 151801123 151801230 -51284302 + MIR SINE MIR 33 153 -55 194 324 0 15 chr5 151801907 151801975 -51283557 - L2 LINE L2 -37 3235 3169 * 280 225 102 12 chr5 151801957 151802063 -51283469 + MIR SINE MIR 70 184 -54 191 250 69 42 chr5 151802286 151802358 -51283174 + MIR SINE MIR 33 106 -102 192 125 50 25 chr5 151802707 151802747 -51282785 + L3 LINE CR1 164 204 -1373 1975 128 0 3 chr5 151803285 151803581 -51281951 + AluSx SINE Alu 4 298 -14 242 118 39 0 chr5 151804305 151804356 -51281176 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 1648 189 0 7 chr5 151805949 151806255 -51279277 + AluJb SINE Alu 5 308 -4 334 346 56 45 chr5 151806275 151806630 -51278902 + L2 LINE L2 2617 2975 -339 473 103 124 10 chr5 151806813 151806910 -51278622 + MER53 DNA DNA 1 108 -81 1101 197 94 0 chr5 151807086 151807309 -51278223 + MIR SINE MIR 9 252 -10 484 255 121 14 chr5 151807389 151807490 -51278042 - MIR SINE MIR 0 262 140 198 0 0 0 chr5 151807490 151807512 -51278020 + (TTA)n Simple_repeat Simple_repeat 3 24 0 484 255 121 14 chr5 151807512 151807551 -51277981 - MIR SINE MIR -122 140 107 327 220 55 44 chr5 151807646 151807737 -51277795 - L2 LINE L2 -2 3270 3179 527 331 92 49 chr5 151808481 151808970 -51276562 - L1ME LINE L1 -302 5819 5310 330 258 105 32 chr5 151809638 151809762 -51275770 + MIR3 SINE MIR 68 200 -8 285 75 0 0 chr5 151810066 151810106 -51275426 + (CA)n Simple_repeat Simple_repeat 2 41 0 459 309 163 14 chr5 151810187 151810690 -51274842 - L2 LINE L2 -1 3312 2728 481 294 25 88 chr5 151810735 151811055 -51274477 + L2 LINE L2 2956 3255 -17 617 309 68 12 chr5 151811827 151812079 -51273453 + L1ME LINE L1 5559 5824 -297 848 280 76 4 chr5 151812087 151812323 -51273209 - MIR SINE MIR -3 259 7 23 0 0 0 chr5 151812579 151812602 -51272930 + AT_rich Low_complexity Low_complexity 1 23 0 377 241 19 37 chr5 151813062 151813170 -51272362 + MIR SINE MIR 59 164 -98 392 257 29 0 chr5 151813263 151813368 -51272164 - MIR SINE MIR -59 203 96 221 233 0 0 chr5 151816509 151816552 -51268980 + G-rich Low_complexity Low_complexity 1 43 0 585 216 193 14 chr5 151817678 151817897 -51267635 - MIR SINE MIR -2 260 2 505 355 40 20 chr5 151818755 151819003 -51266529 - L3 LINE CR1 -15 1562 1310 336 102 0 0 chr5 151819535 151819584 -51265948 + (CA)n Simple_repeat Simple_repeat 1 49 0 262 160 67 27 chr5 151821065 151821140 -51264392 + MIR SINE MIR 67 144 -118 378 0 0 0 chr5 151821492 151821534 -51263998 + (A)n Simple_repeat Simple_repeat 1 42 0 482 256 36 7 chr5 151823013 151823150 -51262382 - MIR SINE MIR -15 247 107 2037 122 68 10 chr5 151823485 151823780 -51261752 - AluJo SINE Alu 0 312 1 289 167 0 0 chr5 151824143 151824197 -51261335 - MIR SINE MIR -131 131 78 186 43 0 0 chr5 151824411 151824434 -51261098 + (CAGGG)n Simple_repeat Simple_repeat 1 23 0 742 177 27 81 chr5 151825608 151825794 -51259738 - MER45A DNA AcHobo -2 176 1 200 208 56 28 chr5 151826035 151826107 -51259425 - L2 LINE L2 -3 3269 3196 653 266 35 31 chr5 151827006 151827232 -51258300 - MIR SINE MIR -15 247 21 200 333 0 0 chr5 151828126 151828180 -51257352 - MIR SINE MIR -107 155 102 567 273 0 0 chr5 151828220 151828352 -51257180 - MER94 DNA DNA -2 132 1 270 81 0 0 chr5 151829474 151829511 -51256021 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2261 116 3 0 chr5 151829590 151829891 -51255641 - AluSx SINE Alu -10 302 1 425 289 78 12 chr5 151829965 151830131 -51255401 + MIR SINE MIR 84 260 -2 523 338 193 22 chr5 151830418 151831086 -51254446 - L3 LINE CR1 -70 1507 726 402 349 30 6 chr5 151831162 151831331 -51254201 - MIR SINE MIR -50 212 40 207 282 146 48 chr5 151831393 151831496 -51254036 + L2 LINE L2 3180 3292 -21 700 292 32 23 chr5 151832471 151832690 -51252842 + MIR SINE MIR 5 225 -37 424 331 65 0 chr5 151833475 151833629 -51251903 - MIR SINE MIR -6 256 93 734 294 63 35 chr5 151833705 151834099 -51251433 + MLT1K LTR MaLR 134 538 -50 281 292 72 34 chr5 151834417 151834613 -51250919 + L1ME LINE L1 5557 5765 -356 234 336 84 38 chr5 151834720 151834958 -51250574 - MIR SINE MIR -10 252 4 229 345 138 14 chr5 151835094 151835239 -51250293 - MIR SINE MIR -14 248 86 203 309 62 0 chr5 151835461 151835558 -51249974 - MIR SINE MIR -37 225 123 2555 107 0 3 chr5 151836344 151836709 -51248823 + THE1B LTR MaLR 1 364 0 236 30 30 0 chr5 151836909 151836942 -51248590 + (CAT)n Simple_repeat Simple_repeat 2 35 0 361 327 118 10 chr5 151836943 151837162 -51248370 - MIR SINE MIR -6 256 15 1411 148 19 11 chr5 151837504 151837717 -51247815 + L1MC3 LINE L1 7410 7628 -157 2310 98 0 0 chr5 151837717 151838026 -51247506 + AluSx SINE Alu 1 309 0 1411 148 19 11 chr5 151838026 151838082 -51247450 + L1MC3 LINE L1 7628 7682 -103 2097 118 3 33 chr5 151838082 151838386 -51247146 + AluSx SINE Alu 1 295 -17 531 157 0 0 chr5 151838510 151838593 -51246939 - AluJ/FLAM SINE Alu -228 84 2 22 35 0 0 chr5 151839658 151839687 -51245845 + AT_rich Low_complexity Low_complexity 1 29 0 231 209 45 30 chr5 151840297 151840364 -51245168 - MIR3 SINE MIR -27 181 114 352 251 275 0 chr5 151840674 151840841 -51244691 - L1MC4a LINE L1 -1922 5886 5674 595 335 69 4 chr5 151841501 151841746 -51243786 + MIR SINE MIR 1 261 -1 2196 103 0 0 chr5 151841817 151842099 -51243433 - AluSx SINE Alu -10 302 21 589 294 100 24 chr5 151842116 151842497 -51243035 + L2 LINE L2 2881 3290 -23 388 265 150 61 chr5 151843354 151843901 -51241631 - L2 LINE L2 -7 3306 2714 540 271 48 24 chr5 151844684 151844891 -51240641 + MIR SINE MIR 13 224 -38 24 32 0 0 chr5 151848480 151848511 -51237021 + GC_rich Low_complexity Low_complexity 1 31 0 1163 31 0 0 chr5 151848814 151848991 -51236541 - AluSp/q SINE Alu 0 332 156 21 0 0 0 chr5 151849447 151849468 -51236064 + GC_rich Low_complexity Low_complexity 1 21 0 210 222 0 0 chr5 151849625 151849670 -51235862 + (CGG)n Simple_repeat Simple_repeat 3 47 0 23 0 0 0 chr5 151852606 151852629 -51232903 + AT_rich Low_complexity Low_complexity 1 23 0 604 305 48 0 chr5 151853630 151853817 -51231715 - MER91A DNA MER1_type 0 196 1 215 246 33 33 chr5 151854182 151854243 -51231289 + L2 LINE L2 3251 3311 -2 225 340 63 25 chr5 151854254 151854413 -51231119 + MIR3 SINE MIR 23 187 -21 214 246 0 0 chr5 151854462 151854519 -51231013 + L2 LINE L2 3194 3250 -22 291 287 0 57 chr5 151854593 151854715 -51230817 - LTR67 LTR ERVL -15 542 428 1422 224 58 42 chr5 151855050 151855502 -51230030 + MLT1C LTR MaLR 1 459 -8 29 78 0 0 chr5 151856367 151856431 -51229101 + AT_rich Low_complexity Low_complexity 1 64 0 393 318 106 7 chr5 151856719 151856870 -51228662 - MIR SINE MIR -51 211 46 28 29 0 0 chr5 151857700 151857735 -51227797 + GC_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 151859637 151859657 -51225875 + (CA)n Simple_repeat Simple_repeat 2 21 0 1634 158 97 4 chr5 151859980 151860259 -51225273 + AluJb SINE Alu 1 305 -7 2173 131 0 3 chr5 151861646 151861944 -51223588 - AluSx SINE Alu -15 297 1 1014 272 117 35 chr5 151862040 151862492 -51223040 - L2 LINE L2 -2 3311 2897 1951 131 62 28 chr5 151862492 151862844 -51222688 + THE1B LTR MaLR 1 364 0 1014 272 117 35 chr5 151862844 151863182 -51222350 - L2 LINE L2 -416 2897 2446 1712 118 118 44 chr5 151863301 151863640 -51221892 - THE1B LTR MaLR 0 364 1 805 291 44 9 chr5 151863806 151864033 -51221499 - MIR SINE MIR -5 257 23 289 308 10 0 chr5 151865125 151865229 -51220303 + MLT1I LTR MaLR 65 169 -240 2517 148 7 30 chr5 151865323 151865757 -51219775 - MSTB LTR MaLR 0 426 3 280 164 75 30 chr5 151865777 151865844 -51219688 + LTR16C LTR ERVL 422 491 0 268 336 100 39 chr5 151865973 151866253 -51219279 + L2 LINE L2 2848 3144 -128 1520 191 25 44 chr5 151866733 151867048 -51218484 - AluJo SINE Alu -3 309 1 511 279 34 14 chr5 151867090 151867237 -51218295 + MLT1J2 LTR MaLR 8 157 -293 2219 260 95 67 chr5 151867271 151868367 -51217165 + L1ME1 LINE L1 23 1149 -5274 2144 149 13 13 chr5 151868367 151868742 -51216790 + THE1C LTR MaLR 1 375 0 9707 105 50 12 chr5 151868742 151870265 -51215267 + THE1C-int LTR MaLR 1 1580 0 2225 152 30 6 chr5 151870265 151870628 -51214904 + THE1C LTR MaLR 1 372 -3 1310 227 33 55 chr5 151870630 151871422 -51214110 + L1ME1 LINE L1 1146 1933 -4887 2374 149 73 5 chr5 151871440 151871835 -51213697 + MSTB LTR MaLR 5 426 0 975 156 26 0 chr5 151871835 151871989 -51213543 + FRAM SINE Alu 11 168 -8 767 273 12 30 chr5 151872003 151872333 -51213199 + L1ME1 LINE L1 2137 2460 -4662 4312 168 40 12 chr5 151872340 151873115 -51212417 + MER21B LTR ERV1 1 797 -66 5908 243 55 23 chr5 151873188 151874101 -51211431 + L1ME1 LINE L1 2467 3350 -3591 2445 89 0 3 chr5 151874101 151874404 -51211128 + AluY SINE Alu 1 302 -9 5908 243 55 23 chr5 151874404 151875352 -51210180 + L1ME1 LINE L1 3350 4383 -2558 1267 206 19 124 chr5 151875352 151875770 -51209762 - MLT1A2 LTR MaLR 0 374 1 5908 243 55 23 chr5 151875770 151876436 -51209096 + L1ME1 LINE L1 4383 5026 -1915 1129 211 146 13 chr5 151876433 151876816 -51208716 + L1ME1 LINE L1 5470 5903 -1038 * 853 148 93 148 chr5 151876817 151876845 -51208687 + AluJo SINE Alu 87 115 -197 198 0 0 0 chr5 151876845 151876867 -51208665 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 853 148 93 148 chr5 151876867 151877075 -51208457 + AluJo SINE Alu 115 310 -2 2501 211 77 35 chr5 151877075 151878044 -51207488 + L1ME1 LINE L1 5927 6955 -6 897 189 148 23 chr5 151878176 151878440 -51207092 + MER5C DNA MER1_type 27 323 -1 461 232 53 20 chr5 151878440 151878625 -51206907 + MLT1J2 LTR MaLR 256 506 -5 1583 144 44 86 chr5 151878937 151879181 -51206351 - MER7A DNA MER2_type -2692 346 93 2411 86 10 0 chr5 151879181 151879483 -51206049 + AluSx SINE Alu 1 305 -7 1583 144 44 86 chr5 151879483 151879508 -51206024 - MER7A DNA MER2_type -2945 93 69 2040 125 0 4 chr5 151879508 151879815 -51205717 + AluSg SINE Alu 1 306 0 2523 73 0 0 chr5 151879825 151880126 -51205406 + AluY SINE Alu 1 301 -10 1583 144 44 86 chr5 151880126 151880205 -51205327 - MER7A DNA MER2_type -2978 60 2 488 241 64 40 chr5 151880374 151880575 -51204957 + MIR SINE MIR 42 259 -3 441 278 80 16 chr5 151880881 151881080 -51204452 - MIR SINE MIR -50 212 6 283 176 162 0 chr5 151881189 151881257 -51204275 + MER116 DNA Mariner 1 79 -1 503 295 200 9 chr5 151881258 151881468 -51204064 - MIR SINE MIR -5 257 8 2525 75 0 3 chr5 151881507 151881813 -51203719 - AluY SINE Alu -6 305 1 227 275 163 0 chr5 151881888 151881928 -51203604 - L2 LINE L2 0 3313 3281 1908 203 76 11 chr5 151881928 151882362 -51203170 + LTR40b LTR ERVL 1 462 0 227 275 163 0 chr5 151882362 151882401 -51203131 - L2 LINE L2 -32 3281 3221 183 229 0 0 chr5 151882573 151882608 -51202924 - L2 LINE L2 -13 3259 3225 891 282 175 16 chr5 151882675 151883115 -51202417 - L2 LINE L2 0 3313 2804 1074 219 5 0 chr5 151884958 151885163 -51200369 - L1PA16 LINE L1 -17 6149 5944 2015 145 26 0 chr5 151885280 151885584 -51199948 - AluSx SINE Alu 0 312 1 418 291 218 2 chr5 151885661 151885857 -51199675 - MIR SINE MIR 0 262 23 191 283 0 0 chr5 151885937 151885983 -51199549 - L2 LINE L2 -14 3258 3213 1870 208 17 89 chr5 151886352 151886816 -51198716 - L1ME1 LINE L1 -5 6161 5710 1150 59 0 0 chr5 151886816 151886952 -51198580 - AluSg/x SINE Alu -9 301 166 1870 208 17 89 chr5 151886952 151887328 -51198204 - L1ME1 LINE L1 -456 5710 5308 622 249 179 26 chr5 151887487 151887621 -51197911 - L1ME1 LINE L1 -813 5333 5221 2044 149 0 9 chr5 151887621 151887936 -51197596 - AluJb SINE Alu 0 312 1 622 249 179 26 chr5 151887936 151888114 -51197418 - L1ME1 LINE L1 -925 5221 4973 2266 123 0 3 chr5 151888144 151888446 -51197086 - AluSx SINE Alu -11 301 1 693 203 101 0 chr5 151890456 151890614 -51194918 + LTR16A1 LTR ERVL 284 457 0 780 281 93 12 chr5 151891358 151891692 -51193840 + L1ME3A LINE L1 5526 5886 -284 1486 224 58 37 chr5 151891742 151892176 -51193356 + MLT1C LTR MaLR 24 466 -1 3204 131 80 2 chr5 151892183 151892672 -51192860 - MER1A DNA MER1_type 0 527 1 2123 112 7 0 chr5 151892894 151893262 -51192270 - AluSq SINE Alu 0 373 4 414 275 101 21 chr5 151893266 151893455 -51192077 - MIR SINE MIR -48 214 11 491 277 9 0 chr5 151893895 151894007 -51191525 - MER81 DNA DNA 0 114 2 220 333 51 8 chr5 151895839 151895956 -51189576 + L2 LINE L2 2609 2730 -584 300 354 79 41 chr5 151896082 151896373 -51189159 + L2 LINE L2 2920 3221 -51 335 259 42 35 chr5 151896659 151896802 -51188730 - MIR SINE MIR -13 249 106 23 0 0 0 chr5 151896894 151896917 -51188615 + AT_rich Low_complexity Low_complexity 1 23 0 369 259 95 32 chr5 151897072 151897230 -51188302 - L2 LINE L2 0 3313 3146 2171 223 14 14 chr5 151897244 151897346 -51188186 + MLT1F LTR MaLR 1 102 -440 2662 92 20 0 chr5 151897346 151897694 -51187838 + THE1A LTR MaLR 1 355 0 2171 223 14 14 chr5 151897694 151898089 -51187443 + MLT1F LTR MaLR 101 498 -44 350 226 157 9 chr5 151901757 151901872 -51183660 + MIR SINE MIR 26 157 -105 210 227 0 0 chr5 151904130 151904174 -51181358 + C-rich Low_complexity Low_complexity 1 44 0 192 77 0 0 chr5 151905361 151905387 -51180145 + (CA)n Simple_repeat Simple_repeat 2 27 0 241 254 28 14 chr5 151906397 151906468 -51179064 + MIR SINE MIR 117 188 -74 355 156 125 86 chr5 151906637 151906765 -51178767 - MIR SINE MIR -107 155 23 261 247 55 14 chr5 151907586 151907659 -51177873 - MIR3 SINE MIR -45 163 88 569 224 145 47 chr5 151907704 151908021 -51177511 + MER7A DNA MER2_type 1 346 0 2373 76 0 20 chr5 151908853 151909154 -51176378 + AluY SINE Alu 1 295 -16 387 0 0 0 chr5 151909603 151909646 -51175886 + (TTTTG)n Simple_repeat Simple_repeat 5 47 0 674 212 118 6 chr5 151909730 151909900 -51175632 + MIR SINE MIR 63 251 -11 279 221 13 4 chr5 151910983 151911217 -51174315 + (CA)n Simple_repeat Simple_repeat 1 236 0 204 264 17 0 chr5 151911267 151911441 -51174091 + (CA)n Simple_repeat Simple_repeat 1 177 0 207 182 0 0 chr5 151911850 151911883 -51173649 + (CA)n Simple_repeat Simple_repeat 2 34 0 2736 36 0 0 chr5 151911970 151912277 -51173255 - AluY SINE Alu -4 307 1 872 183 151 0 chr5 151912745 151912935 -51172597 + MIR SINE MIR 45 262 0 556 274 93 65 chr5 151913395 151913643 -51171889 + MLT1K LTR MaLR 225 479 -109 207 260 98 116 chr5 151914419 151914592 -51170940 - MER5A DNA MER1_type 0 189 20 397 230 0 81 chr5 151914602 151914750 -51170782 - MER112 DNA MER1_type -40 220 85 207 0 0 0 chr5 151914750 151914773 -51170759 + (TG)n Simple_repeat Simple_repeat 2 24 0 183 156 0 0 chr5 151916063 151916095 -51169437 + GA-rich Low_complexity Low_complexity 3 34 0 3334 148 22 22 chr5 151916984 151917036 -51168496 - L1MB3 LINE L1 0 6183 6132 2228 112 3 3 chr5 151917036 151917331 -51168201 - AluSq SINE Alu -18 295 1 3334 148 22 22 chr5 151917331 151917867 -51167665 - L1MB3 LINE L1 -50 6133 5595 554 306 32 5 chr5 151919460 151919646 -51165886 - L2 LINE L2 -3 3310 3120 786 303 50 9 chr5 151919723 151920043 -51165489 + MLT1I LTR MaLR 63 395 -14 1981 144 3 28 chr5 151920043 151920363 -51165169 - AluJb SINE Alu 0 312 1 1411 144 147 12 chr5 151920426 151920760 -51164772 - Charlie1 DNA MER1_type -40 2721 2343 242 185 15 77 chr5 151920768 151920833 -51164699 - Charlie1 DNA MER1_type -2700 61 1 4877 198 64 72 chr5 151921637 151921875 -51163657 - L1MC4 LINE L1 0 8042 7804 2311 78 0 0 chr5 151921875 151922187 -51163345 - AluSc SINE Alu 0 312 1 4877 198 64 72 chr5 151922187 151923754 -51161778 - L1MC4 LINE L1 -238 7804 6172 189 346 51 0 chr5 151926089 151926167 -51159365 + MIR SINE MIR 102 183 -79 237 310 0 0 chr5 151926791 151926862 -51158670 + L2 LINE L2 3200 3270 -2 564 209 87 26 chr5 151927340 151927492 -51158040 + MIR SINE MIR 26 184 -63 1635 156 27 40 chr5 151928308 151928609 -51156923 + AluJb SINE Alu 14 310 -2 470 298 35 0 chr5 151928689 151928830 -51156702 - MIR SINE MIR -82 180 35 239 306 161 35 chr5 151929147 151929346 -51156186 + L2 LINE L2 2739 2962 -352 694 233 66 40 chr5 151929514 151929742 -51155790 + MLT1D LTR MaLR 2 235 -270 519 245 108 56 chr5 151929943 151930212 -51155320 - MER102b DNA MER1_type -1 340 58 212 339 129 18 chr5 152032534 152032705 -51052827 + L2 LINE L2 2292 2481 -833 286 235 0 0 chr5 152032712 152032780 -51052752 - MLT1H LTR MaLR -3 546 479 434 228 53 0 chr5 152032964 152033078 -51052454 - MLT1H LTR MaLR -355 194 75 591 253 130 82 chr5 152033173 152033588 -51051944 + MLT1H LTR MaLR 2 436 -113 364 267 116 42 chr5 152033737 152034022 -51051510 - MLT1I LTR MaLR 0 409 104 1878 134 28 24 chr5 152034024 152034314 -51051218 + AluJo SINE Alu 1 291 -21 1362 238 30 30 chr5 152034326 152034759 -51050773 + L1M4 LINE L1 4824 5256 -890 1116 65 0 7 chr5 152034761 152034899 -51050633 + AluSq/x SINE Alu 1 137 -176 639 172 317 60 chr5 152034899 152035298 -51050234 - SATR1 Satellite Satellite -2 501 1 579 204 202 76 chr5 152035381 152035833 -51049699 - SATR1 Satellite Satellite -146 509 1 390 254 232 41 chr5 152036021 152036241 -51049291 - SATR1 Satellite Satellite -2 468 207 290 252 249 55 chr5 152036324 152036685 -51048847 - SATR1 Satellite Satellite -3 467 37 1917 103 54 0 chr5 152038881 152039142 -51046390 + AluSq SINE Alu 7 281 -32 1106 204 189 61 chr5 152139146 152140299 -50945233 - SATR1 Satellite Satellite -1 1300 1 2182 214 97 33 chr5 152140393 152142542 -50942990 - SATR1 Satellite Satellite 0 2286 1 2443 174 100 9 chr5 152142572 152146459 -50939073 - SATR1 Satellite Satellite -1 7483 3953 1764 41 0 0 chr5 152146459 152146655 -50938877 + AluY SINE Alu 1 196 -115 2443 174 100 9 chr5 152146655 152149429 -50936103 - SATR1 Satellite Satellite -3531 3953 1 1594 189 83 3 chr5 152149457 152149759 -50935773 - SATR1 Satellite Satellite 0 470 145 2544 148 95 43 chr5 152249759 152251407 -50834125 + SATR1 Satellite Satellite 1 1734 -25 2120 209 185 67 chr5 152251423 152254406 -50831126 - SATR1 Satellite Satellite -4 3336 1 930 203 167 71 chr5 152254419 152254814 -50830718 + SATR1 Satellite Satellite 37 469 -1 1021 226 226 34 chr5 152254842 152255432 -50830100 + SATR1 Satellite Satellite 1 703 -3 1238 208 196 62 chr5 152255444 152256227 -50829305 + SATR1 Satellite Satellite 1 887 -94 25 31 0 0 chr5 152256768 152256800 -50828732 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr5 152257030 152257061 -50828471 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr5 152258169 152258199 -50827333 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 152258229 152258262 -50827270 + AT_rich Low_complexity Low_complexity 1 33 0 263 284 147 0 chr5 152258639 152258755 -50826777 + MIR SINE MIR 126 258 -4 1773 154 14 7 chr5 152259004 152259297 -50826235 + AluJo SINE Alu 1 295 -17 277 343 14 0 chr5 152259381 152259451 -50826081 - L2 LINE L2 -50 3222 3152 1230 233 105 12 chr5 152259474 152259817 -50825715 - L1ME1 LINE L1 -5 6161 5787 1655 196 0 3 chr5 152259827 152260123 -50825409 - AluJb SINE Alu -17 295 1 409 220 34 34 chr5 152260462 152260580 -50824952 + MLT1J LTR MaLR 390 507 -4 2514 141 68 5 chr5 152261232 152261672 -50823860 + L1MA8 LINE L1 5819 6286 -5 2068 134 0 0 chr5 152261785 152262097 -50823435 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 152262129 152262151 -50823381 + AT_rich Low_complexity Low_complexity 1 22 0 1675 80 0 9 chr5 152262151 152262375 -50823157 - L1MA3 LINE L1 0 6305 6084 2241 158 3 15 chr5 152265131 152265472 -50820060 - MER1B DNA MER1_type 0 337 1 226 186 25 119 chr5 152265737 152265855 -50819677 + MER113 DNA MER1_type? 7 113 -408 2249 128 46 22 chr5 152265895 152266261 -50819271 - THE1C LTR MaLR 0 375 1 598 311 38 13 chr5 152266388 152266626 -50818906 + MIR SINE MIR 7 250 -12 566 281 21 5 chr5 152266651 152266843 -50818689 + L1ME1 LINE L1 36 230 -6166 22 56 0 0 chr5 152266986 152267022 -50818510 + AT_rich Low_complexity Low_complexity 1 36 0 1672 238 80 14 chr5 152267029 152267086 -50818446 + L1ME1 LINE L1 4765 4817 -1398 1207 176 9 36 chr5 152267086 152267307 -50818225 + MER20 DNA MER1_type 1 215 -4 1672 238 80 14 chr5 152267307 152267836 -50817696 + L1ME1 LINE L1 4817 5399 -816 1692 257 64 60 chr5 152267850 152268029 -50817503 + L1ME1 LINE L1 155 332 -5883 675 90 0 0 chr5 152268029 152268129 -50817403 + (TC)n Simple_repeat Simple_repeat 1 100 0 1692 257 64 60 chr5 152268129 152269372 -50816160 + L1ME1 LINE L1 332 1458 -4757 1272 250 58 0 chr5 152269376 152269740 -50815792 + L1ME1 LINE L1 5846 6230 -5 2253 221 153 36 chr5 152269746 152270503 -50815029 + L1ME1 LINE L1 5385 6230 -5 378 317 88 42 chr5 152270525 152270809 -50814723 + L1M4 LINE L1 4720 5016 -1130 2139 196 35 18 chr5 152272280 152272733 -50812799 - MLT1C LTR MaLR -4 463 3 483 291 127 33 chr5 152273522 152273917 -50811615 - L2 LINE L2 -28 3285 2854 192 327 9 64 chr5 152274106 152274216 -50811316 - L2 LINE L2 -339 2975 2872 271 325 168 5 chr5 152274946 152275143 -50810389 + MIR SINE MIR 15 243 -19 * 801 291 5 0 chr5 152275135 152275341 -50810191 - MIR SINE MIR -10 252 46 471 271 142 55 chr5 152276593 152276811 -50808721 - MIR SINE MIR -12 250 14 1333 232 18 6 chr5 152278908 152279294 -50806238 - L1M4 LINE L1 -3845 2537 2147 2044 147 0 16 chr5 152279294 152279600 -50805932 + AluSx SINE Alu 1 301 -11 2367 88 3 3 chr5 152279602 152279910 -50805622 + AluY SINE Alu 1 308 -3 367 327 27 20 chr5 152281847 152281997 -50803535 - MIR SINE MIR -13 249 99 395 289 26 0 chr5 152283563 152283677 -50801855 + MIR SINE MIR 18 134 -128 287 379 23 0 chr5 152284788 152284962 -50800570 - L2 LINE L2 -253 3060 2883 420 299 60 78 chr5 152285127 152285462 -50800070 - L2 LINE L2 -15 3257 2929 234 0 0 0 chr5 152289474 152289500 -50796032 + (A)n Simple_repeat Simple_repeat 1 26 0 351 80 0 0 chr5 152290095 152290145 -50795387 - MADE1 DNA Mariner -30 50 1 197 191 64 0 chr5 152290202 152290249 -50795283 - MIR SINE MIR -18 244 195 548 240 57 11 chr5 152290250 152290509 -50795023 - L1MB8 LINE L1 0 6178 5886 762 219 39 6 chr5 152290514 152290692 -50794840 - MIR SINE MIR -61 201 18 2289 121 8 11 chr5 152291302 152291667 -50793865 + THE1B LTR MaLR 1 364 0 10162 85 2 121 chr5 152291667 152293460 -50792072 + THE1B-int LTR MaLR 1 1580 0 2210 118 19 45 chr5 152293460 152293834 -50791698 + THE1B LTR MaLR 1 364 0 531 262 54 18 chr5 152293994 152294162 -50791370 - MIR SINE MIR -4 258 85 4060 189 42 10 chr5 152294208 152295161 -50790371 - L1MB5 LINE L1 -9 6165 5187 773 322 24 72 chr5 152295245 152295783 -50789749 - MER34 LTR ERV1 -29 513 2 721 181 37 47 chr5 152295784 152295999 -50789533 - L1MB5 LINE L1 -1026 5120 4908 220 319 53 0 chr5 152297091 152297185 -50788347 - MIR SINE MIR -111 151 53 375 339 74 42 chr5 152297211 152297645 -50787887 - L2 LINE L2 -49 3264 2817 239 338 0 27 chr5 152298285 152298359 -50787173 + MIR SINE MIR 21 92 -170 1055 241 62 13 chr5 152298803 152299110 -50786422 - MLT1C LTR MaLR 0 467 146 410 313 42 7 chr5 152299323 152299482 -50786050 + MIR SINE MIR 19 185 -63 2087 144 28 0 chr5 152299757 152300084 -50785448 + MER1B DNA MER1_type 1 336 -1 1931 192 58 46 chr5 152301223 152301722 -50783810 + MLT1D LTR MaLR 1 505 0 671 240 72 50 chr5 152302283 152302562 -50782970 + L2 LINE L2 3029 3313 0 276 226 129 24 chr5 152302857 152302981 -50782551 - L1ME4a LINE L1 -11 6110 5974 235 291 189 16 chr5 152303472 152303906 -50781626 - L2 LINE L2 -242 3030 2513 267 203 0 0 chr5 152305367 152305426 -50780106 + (TG)n Simple_repeat Simple_repeat 1 59 0 233 254 40 119 chr5 152305836 152305962 -50779570 + L2 LINE L2 3115 3230 -42 14698 131 17 2 chr5 152306751 152309129 -50776403 - Tigger1 DNA MER2_type 0 2418 5 607 273 49 10 chr5 152309154 152309346 -50776186 - MIR SINE MIR -3 259 60 451 252 47 0 chr5 152309390 152309497 -50776035 - MER45A DNA AcHobo -18 160 49 233 330 30 10 chr5 152309920 152310020 -50775512 + MIR3 SINE MIR 54 155 -53 196 420 0 0 chr5 152311219 152311319 -50774213 - MIR SINE MIR -24 238 139 299 215 46 0 chr5 152311336 152311401 -50774131 - L2 LINE L2 -17 3296 3229 346 303 182 0 chr5 152312262 152312427 -50773105 - MIR SINE MIR -3 259 65 2596 107 0 3 chr5 152312928 152313292 -50772240 - THE1B LTR MaLR 0 364 2 3336 160 7 66 chr5 152313297 152314022 -50771510 - LTR8A LTR ERV1 -45 682 1 884 276 68 25 chr5 152314054 152314380 -50771152 - Charlie8 DNA MER1_type -1980 437 98 228 314 151 4 chr5 152314816 152315087 -50770445 - L1ME4a LINE L1 -30 6091 5781 303 28 0 0 chr5 152315102 152315138 -50770394 + (CA)n Simple_repeat Simple_repeat 2 37 0 466 325 75 8 chr5 152315150 152315390 -50770142 + MIR SINE MIR 5 260 -2 395 312 22 26 chr5 152315399 152315630 -50769902 - L1ME4a LINE L1 -347 5774 5545 266 344 152 16 chr5 152316259 152316634 -50768898 - L2 LINE L2 -5 3267 2842 209 356 26 0 chr5 152317090 152317205 -50768327 - L2 LINE L2 -920 2394 2277 454 308 91 10 chr5 152317361 152317559 -50767973 - MIR SINE MIR -15 247 34 355 324 18 41 chr5 152318852 152319022 -50766510 - MIR SINE MIR -50 212 47 345 250 10 0 chr5 152321853 152321949 -50763583 + L1ME3 LINE L1 6066 6162 0 758 274 143 20 chr5 152322031 152322429 -50763103 + L1MC4 LINE L1 7463 7909 -133 348 24 0 0 chr5 152322457 152322498 -50763034 + (CA)n Simple_repeat Simple_repeat 2 42 0 315 195 0 68 chr5 152322869 152322987 -50762545 + L1MD3 LINE L1 7886 7995 0 225 295 39 0 chr5 152324510 152324588 -50760944 - MIR SINE MIR -10 252 172 81 21 0 0 chr5 152324660 152324755 -50760777 + AT_rich Low_complexity Low_complexity 1 95 0 245 234 0 23 chr5 152324756 152324833 -50760699 - MIR SINE MIR -129 79 5 480 18 0 0 chr5 152324850 152324907 -50760625 + (CA)n Simple_repeat Simple_repeat 2 58 0 215 279 33 0 chr5 152325733 152325794 -50759738 - L2 LINE L2 -5 3308 3246 365 246 37 2 chr5 152325859 152325970 -50759562 - MIR SINE MIR -62 146 58 251 260 125 10 chr5 152325961 152326057 -50759475 + MIR SINE MIR 23 129 -133 * 559 293 25 17 chr5 152326037 152326276 -50759256 + L2 LINE L2 2724 2964 -350 * 807 265 35 21 chr5 152326272 152326559 -50758973 - L2 LINE L2 -1391 1923 1633 252 122 0 0 chr5 152326568 152326609 -50758923 + (TCC)n Simple_repeat Simple_repeat 2 42 0 507 291 55 5 chr5 152327495 152327711 -50757821 - MIR SINE MIR -18 244 20 210 235 61 51 chr5 152328686 152328784 -50756748 + MIR SINE MIR 33 131 -77 302 341 75 23 chr5 152329200 152329414 -50756118 + L3 LINE CR1 699 923 -654 384 206 0 41 chr5 152329416 152329513 -50756019 - L2 LINE L2 -14 3299 3207 381 301 188 0 chr5 152329551 152329790 -50755742 + L3 LINE CR1 983 1266 -311 342 67 0 0 chr5 152329914 152329959 -50755573 + (T)n Simple_repeat Simple_repeat 1 45 0 204 225 0 0 chr5 152330488 152330528 -50755004 + (TATG)n Simple_repeat Simple_repeat 1 40 0 237 132 0 0 chr5 152331325 152331363 -50754169 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 202 298 48 19 chr5 152331365 152331469 -50754063 - L2 LINE L2 0 3272 3166 490 298 90 15 chr5 152333049 152333300 -50752232 - MIR SINE MIR -1 261 6 261 0 0 0 chr5 152333381 152333410 -50752122 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 288 0 0 0 chr5 152333409 152333441 -50752091 + (TG)n Simple_repeat Simple_repeat 2 33 0 198 301 111 49 chr5 152334501 152334887 -50750645 + L2 LINE L2 2863 3272 0 275 271 82 0 chr5 152335606 152335728 -50749804 - L1ME4a LINE L1 -179 5942 5811 581 274 18 12 chr5 152337723 152337891 -50747641 - MER117 DNA MER1_type -28 169 1 237 275 17 12 chr5 152339547 152339717 -50745815 + L1MB8 LINE L1 5704 5905 -1903 245 273 26 0 chr5 152339763 152339840 -50745692 + HAL1b LINE L1 1193 1271 -77 476 16 16 0 chr5 152340386 152340447 -50745085 + (TA)n Simple_repeat Simple_repeat 2 63 0 234 0 0 0 chr5 152340446 152340472 -50745060 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 261 0 0 0 chr5 152340471 152340500 -50745032 + (GA)n Simple_repeat Simple_repeat 1 29 0 1282 229 82 3 chr5 152340860 152341214 -50744318 - Charlie1b DNA MER1_type -87 436 55 236 250 0 0 chr5 152341241 152341289 -50744243 + L1MC4 LINE L1 6656 6703 -1339 230 292 0 0 chr5 152341247 152341312 -50744220 - L1MC4 LINE L1 -1339 6703 6639 * 1347 238 12 19 chr5 152343209 152343532 -50742000 + L1M4 LINE L1 3902 4222 -1924 473 178 9 65 chr5 152343545 152343652 -50741880 + L1MB8 LINE L1 6071 6171 -7 252 86 0 0 chr5 152343656 152343691 -50741841 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1927 162 3 0 chr5 152343693 152343983 -50741549 - AluJb SINE Alu -21 291 1 207 179 0 0 chr5 152344173 152344212 -50741320 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 441 317 26 52 chr5 152344290 152344520 -50741012 + MIR SINE MIR 33 256 -6 663 216 87 6 chr5 152345122 152345375 -50740157 + MER46C DNA MER2_type 10 335 -3 274 364 0 32 chr5 152345472 152345626 -50739906 + MIR SINE MIR 20 168 -94 432 0 0 0 chr5 152346531 152346579 -50738953 + (CA)n Simple_repeat Simple_repeat 2 49 0 463 273 9 9 chr5 152346689 152346799 -50738733 + MIR SINE MIR 6 115 -147 2196 118 0 0 chr5 152347129 152347426 -50738106 + AluSx SINE Alu 1 297 -15 338 243 0 107 chr5 152350372 152350416 -50735116 - MIR SINE MIR -1 261 214 2360 88 3 3 chr5 152350416 152350721 -50734811 - AluSg SINE Alu -5 305 1 338 243 0 107 chr5 152350721 152350816 -50734716 - MIR SINE MIR -48 214 137 620 221 45 19 chr5 152350908 152351062 -50734470 - MIR SINE MIR -89 173 16 361 302 71 8 chr5 152351091 152351217 -50734315 + L2 LINE L2 3175 3308 -5 329 302 122 29 chr5 152351697 152351942 -50733590 + MLT1J LTR MaLR 42 309 -202 801 306 34 37 chr5 152352034 152352357 -50733175 + MER113 DNA MER1_type? 198 519 -2 523 287 20 0 chr5 152352433 152352583 -50732949 + MIR SINE MIR 1 153 -109 650 183 11 91 chr5 152352852 152353027 -50732505 + MER58C DNA MER1_type 55 215 0 273 242 70 39 chr5 152353743 152353871 -50731661 + L2 LINE L2 2926 3057 -256 187 314 113 32 chr5 152353910 152354034 -50731498 + L2 LINE L2 3180 3313 0 353 332 161 0 chr5 152355416 152355627 -50729905 - MIR SINE MIR -13 249 5 575 198 25 8 chr5 152355745 152355866 -50729666 - MLT1C LTR MaLR 0 467 345 286 343 22 0 chr5 152355948 152356085 -50729447 - MLT1L LTR MaLR 0 615 476 246 244 36 129 chr5 152356192 152356385 -50729147 - L1ME LINE L1 -472 5649 5475 1397 164 8 0 chr5 152357014 152357252 -50728280 + L1PA16 LINE L1 5909 6148 -18 454 335 40 0 chr5 152357324 152357524 -50728008 - L1ME LINE L1 -2189 3957 3750 1696 155 7 58 chr5 152358174 152358483 -50727049 - AluJo SINE Alu -19 293 1 305 338 66 24 chr5 152358679 152358892 -50726640 - L1ME LINE L1 -2871 3275 3054 480 279 50 6 chr5 152359054 152359215 -50726317 + MIR SINE MIR 65 232 -30 283 259 43 26 chr5 152359227 152359243 -50726289 - MIR SINE MIR -97 165 151 522 125 0 0 chr5 152359243 152359323 -50726209 - MADE1 DNA Mariner 0 80 1 283 259 43 26 chr5 152359323 152359422 -50726110 - MIR SINE MIR -111 151 48 245 211 53 40 chr5 152359521 152359597 -50725935 - HAL1b LINE L1 -1001 347 271 4016 130 114 130 chr5 152360239 152360573 -50724959 - L1MC3 LINE L1 -8 7777 7439 2102 114 3 3 chr5 152360573 152360863 -50724669 + AluSx SINE Alu 1 290 -22 4016 130 114 130 chr5 152360863 152361172 -50724360 - L1MC3 LINE L1 -346 7439 7126 239 246 0 29 chr5 152361172 152361241 -50724291 - MLT1F1 LTR MaLR -480 87 21 4016 130 114 130 chr5 152361241 152361632 -50723900 - L1MC3 LINE L1 -659 7126 6692 1236 227 107 71 chr5 152361854 152362389 -50723143 - MLT1E LTR MaLR 0 593 7 358 297 35 14 chr5 152362624 152362769 -50722763 - MIR SINE MIR -18 244 97 185 222 22 0 chr5 152363158 152363203 -50722329 - MIR SINE MIR -168 94 49 189 213 0 0 chr5 152364004 152364051 -50721481 + (TTAGGG)n Simple_repeat Simple_repeat 5 51 0 473 344 60 3 chr5 152364090 152364375 -50721157 + L2 LINE L2 1980 2280 -1034 276 330 186 0 chr5 152365724 152365960 -50719572 + L2 LINE L2 2376 2655 -659 450 338 19 7 chr5 152365969 152366123 -50719409 - MER91A DNA MER1_type -16 180 25 417 316 34 21 chr5 152366141 152366375 -50719157 + L2 LINE L2 2635 2871 -443 400 298 91 47 chr5 152366432 152366707 -50718825 + L2 LINE L2 2989 3275 -38 1699 162 3 25 chr5 152367190 152367474 -50718058 - AluJb SINE Alu -34 278 1 209 196 18 0 chr5 152368312 152368368 -50717164 + CT-rich Low_complexity Low_complexity 2 58 0 359 355 0 0 chr5 152368750 152368871 -50716661 + MIR SINE MIR 30 150 -58 638 328 94 37 chr5 152368876 152369312 -50716220 - MLT1K LTR MaLR -3 585 125 182 373 18 9 chr5 152369568 152369678 -50715854 - MIR3 SINE MIR -92 116 6 354 236 28 0 chr5 152370005 152370077 -50715455 + MIR3 SINE MIR 108 181 -27 305 189 11 0 chr5 152371218 152371313 -50714219 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 2294 262 118 25 chr5 152371354 152372479 -50713053 - L2 LINE L2 0 3313 2045 320 121 35 0 chr5 152373144 152373202 -50712330 + (CATA)n Simple_repeat Simple_repeat 4 63 0 294 29 0 0 chr5 152373258 152373293 -50712239 + (TA)n Simple_repeat Simple_repeat 1 35 0 14994 128 26 6 chr5 152375901 152378248 -50707284 - Tigger1 DNA MER2_type 0 2418 25 2111 243 51 43 chr5 152378443 152379008 -50706524 + MER77 LTR ERV1 54 601 -4 1101 266 84 8 chr5 152379151 152379531 -50706001 + MLT1I LTR MaLR 1 409 0 353 278 190 15 chr5 152379678 152379883 -50705649 + L1ME LINE L1 5575 5815 -306 180 97 0 0 chr5 152379991 152380022 -50705510 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2917 151 65 17 chr5 152380048 152380671 -50704861 - MER39 LTR ERV1 0 707 1 616 328 0 6 chr5 152380672 152380843 -50704689 + L1MEc LINE L1 131 300 -6096 3871 243 19 17 chr5 152380851 152381977 -50703555 + L1M4 LINE L1 2975 4103 -2043 338 188 0 47 chr5 152381980 152382065 -50703467 - L1M4 LINE L1 -1564 4582 4502 3861 209 32 40 chr5 152382074 152383172 -50702360 + L1M4 LINE L1 4109 5197 -949 2255 97 6 6 chr5 152383178 152383513 -50702019 + AluSx SINE Alu 1 335 0 2175 100 4 0 chr5 152383522 152383801 -50701731 + AluSp SINE Alu 1 280 -33 367 306 57 118 chr5 152384029 152384623 -50700909 - L1M2 LINE L1 -5457 1392 835 237 341 78 16 chr5 152385395 152385524 -50700008 - L3 LINE CR1 -3 1574 1438 226 320 41 27 chr5 152385714 152385861 -50699671 - L3 LINE CR1 -741 836 688 1570 114 60 114 chr5 152387429 152387772 -50697760 - AluSx SINE Alu 0 328 2 1557 79 5 0 chr5 152387794 152387996 -50697536 - AluYa5 SINE Alu -10 301 99 28 0 0 0 chr5 152388445 152388473 -50697059 + AT_rich Low_complexity Low_complexity 1 28 0 385 226 186 32 chr5 152389769 152389893 -50695639 - MIR SINE MIR -74 188 46 986 294 123 18 chr5 152391735 152392191 -50693341 - MLT1J LTR MaLR -7 504 1 719 310 53 25 chr5 152392206 152392490 -50693042 + L2 LINE L2 2999 3290 -23 226 308 16 53 chr5 152392834 152392974 -50692558 + MIR SINE MIR 21 157 -62 446 263 0 51 chr5 152393544 152393662 -50691870 - L2 LINE L2 0 3313 3202 1204 240 62 0 chr5 152393678 152393970 -50691562 - MER58B DNA MER1_type -31 310 1 35 41 0 0 chr5 152394727 152394776 -50690756 + AT_rich Low_complexity Low_complexity 1 49 0 209 169 0 68 chr5 152395828 152395887 -50689645 + T-rich Low_complexity Low_complexity 5 59 0 457 305 106 45 chr5 152396246 152396781 -50688751 + L2 LINE L2 2734 3297 -16 2099 104 4 0 chr5 152397297 152397611 -50687921 + AluSg SINE Alu 1 315 0 317 246 72 58 chr5 152399195 152399333 -50686199 - MARNA DNA Mariner -150 436 297 413 58 0 0 chr5 152399369 152399421 -50686111 - MADE1 DNA Mariner -28 52 1 606 292 41 19 chr5 152399736 152400003 -50685529 - L1ME3A LINE L1 -245 5925 5653 964 55 23 0 chr5 152400927 152401055 -50684477 - L1MA2 LINE L1 -4 6300 6170 243 296 51 75 chr5 152401872 152402166 -50683366 + L1ME3A LINE L1 2266 2552 -3594 1255 124 105 59 chr5 152402221 152402466 -50683066 + MER33 DNA MER1_type 5 237 -2348 189 0 0 0 chr5 152402466 152402487 -50683045 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2446 55 0 3 chr5 152402492 152402784 -50682748 - AluY SINE Alu -20 291 1 1255 124 105 59 chr5 152402784 152402838 -50682694 + MER33 DNA MER1_type 240 324 0 953 236 27 14 chr5 152402871 152403163 -50682369 + L1ME3A LINE L1 4414 4709 -1437 2338 269 15 3 chr5 152403165 152403760 -50681772 - ERVL LTR ERVL -3585 2179 1578 295 328 38 0 chr5 152403795 152403926 -50681606 - ERVL LTR ERVL -4286 1478 1343 1780 236 76 4 chr5 152403929 152404404 -50681128 + L1ME3A LINE L1 5649 6157 -13 985 105 0 14 chr5 152404724 152404867 -50680665 + L1PA15 LINE L1 6012 6152 -13 259 305 0 0 chr5 152405386 152405445 -50680087 + MIR SINE MIR 204 262 0 342 251 66 48 chr5 152406257 152406378 -50679154 + MIR SINE MIR 30 152 -56 2217 113 0 0 chr5 152407016 152407309 -50678223 - AluSc SINE Alu -16 293 1 376 314 51 47 chr5 152409236 152409315 -50676217 + L1MC4a LINE L1 5708 5785 -2023 2343 108 116 15 chr5 152409315 152409704 -50675828 + MSTA LTR MaLR 1 428 0 376 314 51 47 chr5 152409704 152409860 -50675672 + L1MC4a LINE L1 5785 5944 -1864 321 235 0 0 chr5 152410541 152410609 -50674923 + MLT1H LTR MaLR 481 548 -1 1635 194 3 7 chr5 152410893 152411192 -50674340 + AluJo SINE Alu 6 303 -9 434 278 132 52 chr5 152411275 152411585 -50673947 + L1ME3A LINE L1 5019 5303 -1073 2362 93 7 0 chr5 152411585 152411887 -50673645 + AluSq SINE Alu 1 304 -9 434 278 132 52 chr5 152411887 152412143 -50673389 + L1ME3A LINE L1 5303 5633 -743 2430 198 47 33 chr5 152412419 152413122 -50672410 + L1MC5 LINE L1 7249 7961 0 833 279 99 0 chr5 152413587 152413849 -50671683 + L1ME3A LINE L1 5597 5884 -286 2274 75 0 4 chr5 152413857 152414136 -50671396 + AluSc SINE Alu 1 278 -31 180 0 0 0 chr5 152414136 152414156 -50671376 + (CA)n Simple_repeat Simple_repeat 1 20 0 244 289 79 46 chr5 152414374 152414526 -50671006 + L1ME3A LINE L1 5977 6133 -37 3984 142 20 42 chr5 152414594 152415336 -50670196 + L1P LINE L1 3121 3846 -2300 25 0 0 0 chr5 152415336 152415361 -50670171 + AT_rich Low_complexity Low_complexity 1 25 0 384 331 38 8 chr5 152415479 152415612 -50669920 - MIR SINE MIR -125 137 1 339 314 33 0 chr5 152415686 152415807 -50669725 + MIR SINE MIR 117 241 -21 2195 125 0 0 chr5 152415809 152416106 -50669426 + AluSc SINE Alu 1 297 -12 28 0 0 0 chr5 152416106 152416134 -50669398 + AT_rich Low_complexity Low_complexity 1 28 0 6392 146 34 7 chr5 152416224 152417565 -50667967 - Ricksha DNA DNA -11 3235 1826 767 137 9 13 chr5 152417570 152417789 -50667743 - Ricksha DNA DNA -2933 313 3 225 94 0 0 chr5 152418933 152418965 -50666567 + (CA)n Simple_repeat Simple_repeat 1 32 0 367 316 43 22 chr5 152419507 152419646 -50665886 - MER117 DNA MER1_type -55 142 1 500 58 35 12 chr5 152419770 152419856 -50665676 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 4838 151 41 9 chr5 152420297 152421387 -50664145 - L1MB7 LINE L1 -14 6668 5544 * 5705 133 16 43 chr5 152421374 152422241 -50663291 - L1MA10 LINE L1 0 6334 5498 2336 111 42 28 chr5 152422241 152422600 -50662932 + THE1B LTR MaLR 1 364 0 5705 133 16 43 chr5 152422600 152422757 -50662775 - L1MA10 LINE L1 -836 5498 5338 23 54 0 0 chr5 152422804 152422841 -50662691 + AT_rich Low_complexity Low_complexity 1 37 0 813 194 38 0 chr5 152422841 152423001 -50662531 - L1MA9 LINE L1 -35 6277 6112 3043 185 33 63 chr5 152423002 152423790 -50661742 - L1MB7 LINE L1 -1073 5571 4808 763 274 11 0 chr5 152423791 152423966 -50661566 + MER8 DNA MER2_type 1 177 -62 436 192 0 0 chr5 152423999 152424072 -50661460 - Tigger2 DNA MER2_type -2645 73 1 542 256 64 27 chr5 152424176 152424473 -50661059 - L1MB7 LINE L1 -4071 2575 2268 6660 216 48 28 chr5 152424478 152426492 -50659040 - L1MB7 LINE L1 -4552 2094 5 2235 151 12 58 chr5 152428383 152428815 -50656717 - MLT2D LTR ERVL 0 414 3 299 281 43 58 chr5 152431804 152431943 -50653589 - MIR3 SINE MIR -14 194 58 420 335 95 0 chr5 152432188 152432409 -50653123 + MIR SINE MIR 21 262 0 2177 120 0 0 chr5 152432697 152433020 -50652512 + AluSx SINE Alu 1 323 0 895 261 65 51 chr5 152433997 152434353 -50651179 + MLT1J LTR MaLR 69 429 -82 547 271 126 38 chr5 152434437 152434913 -50650619 - L1M4 LINE L1 -3420 2726 2209 1681 159 48 0 chr5 152434915 152435208 -50650324 - AluJo SINE Alu 0 306 1 1285 219 71 31 chr5 152435264 152435615 -50649917 + MLT1A1 LTR MaLR 1 365 0 684 196 42 14 chr5 152435624 152435767 -50649765 - LTR52 LTR ERVL -3 418 272 482 115 0 34 chr5 152435849 152435994 -50649538 - L1MC3 LINE L1 0 7785 7555 340 248 229 0 chr5 152435996 152436105 -50649427 + MER5A DNA MER1_type 50 183 -6 470 306 101 66 chr5 152436113 152436282 -50649250 + L1MEc LINE L1 1175 1337 -5226 15925 28 2 0 chr5 152436282 152438943 -50646589 - L1PA2 LINE L1 0 6155 3533 470 306 101 66 chr5 152438943 152439866 -50645666 + L1MEc LINE L1 1337 2428 -4135 1170 176 107 15 chr5 152439876 152440137 -50645395 + LTR52 LTR ERVL 1 285 -136 324 152 0 0 chr5 152440137 152440203 -50645329 - L1MDa LINE L1 -5179 1361 1296 1754 170 0 0 chr5 152440214 152440485 -50645047 - AluJo SINE Alu -30 282 12 725 150 0 33 chr5 152440517 152440637 -50644895 - FLAM_C SINE Alu -22 121 6 245 282 35 24 chr5 152441381 152441466 -50644066 - MER5B DNA MER1_type -2 176 91 6728 140 10 4 chr5 152441888 152443469 -50642063 - L1MA2 LINE L1 0 6304 4716 425 308 55 45 chr5 152444027 152444319 -50641213 - L2 LINE L2 -14 3299 3005 1808 143 49 29 chr5 152446088 152446395 -50639137 - MLT1A1 LTR MaLR 0 365 53 180 0 0 0 chr5 152447804 152447824 -50637708 + (CAGA)n Simple_repeat Simple_repeat 3 22 0 217 331 160 23 chr5 152448662 152449012 -50636520 - L2 LINE L2 -621 2693 2296 1587 157 12 102 chr5 152449107 152449508 -50636024 + MLT1A1 LTR MaLR 1 365 0 184 298 0 0 chr5 152449575 152449632 -50635900 - L2 LINE L2 -555 2759 2703 381 266 123 26 chr5 152449664 152449818 -50635714 + MIR SINE MIR 52 220 -42 542 255 7 13 chr5 152451190 152451206 -50634326 - L1MA10 LINE L1 0 6334 6319 1636 232 66 18 chr5 152451206 152451646 -50633886 - L1ME1 LINE L1 -5 6161 5701 1386 235 181 38 chr5 152452542 152453049 -50632483 - MLT1E LTR MaLR -9 584 5 1454 210 64 23 chr5 152453345 152453518 -50632014 + MLT1I LTR MaLR 3 167 -242 399 21 0 0 chr5 152453518 152453566 -50631966 + (TG)n Simple_repeat Simple_repeat 2 49 0 1454 210 64 23 chr5 152453566 152453783 -50631749 + MLT1I LTR MaLR 167 409 0 677 299 29 0 chr5 152454822 152455063 -50630469 - MIR SINE MIR 0 262 15 213 108 0 0 chr5 152455852 152455889 -50629643 + (TG)n Simple_repeat Simple_repeat 2 38 0 379 295 31 62 chr5 152456067 152456291 -50629241 - MIR SINE MIR -32 230 14 227 306 60 30 chr5 152456813 152457012 -50628520 - L1ME1 LINE L1 -828 5318 5114 242 320 20 0 chr5 152457260 152457360 -50628172 - MER117 DNA MER1_type -34 163 62 2420 77 0 10 chr5 152457716 152458026 -50627506 - AluY SINE Alu -4 307 1 328 236 236 7 chr5 152458067 152458215 -50627317 - HAL1b LINE L1 -767 581 400 835 208 70 119 chr5 152458336 152458739 -50626793 - MER68 LTR ERV1 -2 560 178 349 119 0 17 chr5 152458738 152458797 -50626735 - MER68 LTR ERV1 -504 58 1 * 322 348 38 6 chr5 152460039 152460197 -50625335 + MIR3 SINE MIR 30 192 -16 558 279 173 45 chr5 152461705 152462220 -50623312 - L2 LINE L2 -13 3300 2686 397 258 0 0 chr5 152462438 152462527 -50623005 - MLT1K LTR MaLR -3 585 497 2383 101 0 0 chr5 152463710 152464008 -50621524 + AluSx SINE Alu 1 298 -14 1185 141 11 0 chr5 152464008 152464185 -50621347 + AluSg/x SINE Alu 134 312 0 1596 134 9 79 chr5 152464389 152464732 -50620800 + MER33 DNA MER1_type 2 320 -4 3863 139 17 7 chr5 152466488 152467344 -50618188 - L1MA3 LINE L1 -436 5869 5003 2146 176 23 19 chr5 152467363 152467796 -50617736 + L1MA3 LINE L1 5871 6305 0 958 153 6 38 chr5 152469625 152469808 -50615724 - MER5B DNA MER1_type -1 177 1 221 228 158 0 chr5 152469816 152469906 -50615626 - MER5A DNA MER1_type -80 109 2 574 269 182 23 chr5 152470078 152470342 -50615190 + Charlie2 DNA MER1_type 8 313 -2549 450 265 95 21 chr5 152470374 152470563 -50614969 - MIR SINE MIR 0 262 60 305 234 0 21 chr5 152470563 152470657 -50614875 + Charlie2a DNA MER1_type 1583 1674 -1188 385 197 120 17 chr5 152470664 152470781 -50614751 + Charlie2a DNA MER1_type 2734 2862 0 372 250 139 21 chr5 152470782 152470926 -50614606 + MIR SINE MIR 32 192 -70 422 370 22 26 chr5 152471305 152471532 -50614000 - L2 LINE L2 -61 3211 2986 233 179 0 0 chr5 152472823 152472862 -50612670 - L1M3e LINE L1 -6200 830 792 2291 124 33 28 chr5 152475150 152475512 -50610020 - THE1B LTR MaLR 0 364 1 666 304 17 25 chr5 152475556 152475793 -50609739 + MIR SINE MIR 9 243 -19 255 235 103 0 chr5 152477041 152477109 -50608423 - MIR SINE MIR -72 136 62 187 306 122 58 chr5 152477522 152477865 -50607667 - L2 LINE L2 -530 2784 2420 36 0 0 0 chr5 152478769 152478805 -50606727 + AT_rich Low_complexity Low_complexity 1 36 0 264 302 0 0 chr5 152478805 152478868 -50606664 - MER5A DNA MER1_type -118 71 9 258 333 71 0 chr5 152479850 152479949 -50605583 - MIR SINE MIR -67 141 36 409 285 177 0 chr5 152480248 152480422 -50605110 - MIR SINE MIR -53 209 2 228 316 111 42 chr5 152480422 152480901 -50604631 + L2 LINE L2 2165 2678 -636 435 320 63 39 chr5 152481212 152481593 -50603939 + L2 LINE L2 2226 2615 -699 301 275 193 70 chr5 152481784 152482028 -50603504 + L2 LINE L2 2985 3258 -14 200 265 0 0 chr5 152483172 152483221 -50602311 + GA-rich Low_complexity Low_complexity 2 50 0 184 214 143 48 chr5 152483623 152483707 -50601825 - MIR SINE MIR -120 142 51 309 288 49 19 chr5 152485286 152485433 -50600099 - MIR3 SINE MIR -42 166 33 209 311 0 54 chr5 152487044 152487118 -50598414 - L2 LINE L2 -211 3061 2992 204 40 0 0 chr5 152487941 152487966 -50597566 + (TG)n Simple_repeat Simple_repeat 2 26 0 579 307 164 0 chr5 152488138 152488363 -50597169 + MIR SINE MIR 1 262 0 2530 58 3 10 chr5 152489164 152489476 -50596056 + AluY SINE Alu 1 310 -1 2038 198 100 25 chr5 152492069 152492257 -50593275 + MLT1D LTR MaLR 1 174 -331 2124 120 0 20 chr5 152492257 152492556 -50592976 + AluSg SINE Alu 1 293 -17 2038 198 100 25 chr5 152492556 152492837 -50592695 + MLT1D LTR MaLR 174 505 0 523 260 47 24 chr5 152492984 152493153 -50592379 - MIR SINE MIR -17 245 73 1950 144 6 13 chr5 152494131 152494444 -50591088 + MER1B DNA MER1_type 29 339 0 214 256 51 39 chr5 152495396 152495474 -50590058 + MIR SINE MIR 58 136 -72 511 260 83 18 chr5 152496103 152496282 -50589250 - MIR3 SINE MIR -6 202 14 23 0 0 0 chr5 152497211 152497234 -50588298 + AT_rich Low_complexity Low_complexity 1 23 0 401 294 24 48 chr5 152497403 152497529 -50588003 - MIR SINE MIR -67 141 19 1122 171 5 5 chr5 152498604 152498803 -50586729 + MER2 DNA MER2_type 2 200 -145 361 227 0 0 chr5 152498845 152498911 -50586621 + MER2 DNA MER2_type 280 345 0 721 168 8 24 chr5 152498947 152499072 -50586460 + FLAM_C SINE Alu 1 123 -10 2237 101 0 7 chr5 152499083 152499398 -50586134 + AluSq SINE Alu 1 313 0 702 305 108 22 chr5 152502219 152502580 -50582952 - L2 LINE L2 -1 3312 2921 181 318 111 32 chr5 152502903 152503092 -50582440 - L2 LINE L2 -212 3060 2857 2251 116 3 0 chr5 152503873 152504174 -50581358 + AluSx SINE Alu 1 302 -10 190 425 53 0 chr5 152504678 152504791 -50580741 - L2 LINE L2 -28 3244 3126 2023 115 47 0 chr5 152504980 152505292 -50580240 + AluSq SINE Alu 1 325 0 809 280 0 5 chr5 152506344 152506537 -50578995 - MIR SINE MIR -2 260 69 210 324 108 20 chr5 152508803 152508905 -50576627 + L3b LINE CR1 1370 1480 -103 618 273 158 17 chr5 152510668 152511085 -50574447 - LTR33 LTR ERVL -8 513 38 290 297 48 42 chr5 152513944 152514109 -50571423 + MIR SINE MIR 46 211 -51 404 219 70 94 chr5 152514155 152514251 -50571281 + L2 LINE L2 3147 3241 -31 2338 112 3 0 chr5 152514251 152514563 -50570969 + AluSq SINE Alu 1 313 0 404 219 70 94 chr5 152514563 152514594 -50570938 + L2 LINE L2 3241 3271 -1 308 227 15 0 chr5 152516675 152516741 -50568791 + MIR SINE MIR 115 181 -81 349 259 102 11 chr5 152517952 152518099 -50567433 - MIR SINE MIR -63 145 32 493 269 119 0 chr5 152518238 152518394 -50567138 + MIR SINE MIR 52 218 -44 223 324 14 0 chr5 152518642 152518713 -50566819 - L2 LINE L2 -60 3253 3182 275 298 168 23 chr5 152518742 152518873 -50566659 - L2 LINE L2 0 3313 3164 432 274 104 27 chr5 152520008 152520220 -50565312 - MIR SINE MIR -40 222 1 396 158 0 0 chr5 152520704 152520780 -50564752 + (CA)n Simple_repeat Simple_repeat 2 77 0 236 292 15 131 chr5 152521138 152521268 -50564264 - L2 LINE L2 -481 2833 2719 4191 182 28 33 chr5 152521298 152523126 -50562406 - L1MB3 LINE L1 -3 6180 4365 1848 277 124 31 chr5 152523132 152523962 -50561570 - L2 LINE L2 -605 2709 1803 283 287 178 39 chr5 152524127 152524256 -50561276 + L2 LINE L2 3110 3256 -16 2316 141 8 6 chr5 152525394 152525757 -50559775 - THE1B LTR MaLR 0 364 1 356 316 69 66 chr5 152526386 152526750 -50558782 - L1M4 LINE L1 -1097 5049 4685 1617 226 114 9 chr5 152526933 152527447 -50558085 + MLT1E2 LTR MaLR 1 626 0 441 230 58 65 chr5 152528139 152528192 -50557340 - MIR SINE MIR -113 149 97 1671 198 34 8 chr5 152528192 152528546 -50556986 + MLT1A1 LTR MaLR 3 365 0 441 230 58 65 chr5 152528546 152528631 -50556901 - MIR SINE MIR -165 97 12 548 258 60 13 chr5 152528680 152528831 -50556701 - MER5B DNA MER1_type -1 177 20 244 311 44 30 chr5 152528838 152528973 -50556559 - MER5A DNA MER1_type -5 184 48 455 233 19 0 chr5 152529002 152529105 -50556427 - MER5A DNA MER1_type -80 109 4 574 218 118 24 chr5 152529141 152529311 -50556221 + MER5A DNA MER1_type 2 187 -2 322 220 0 0 chr5 152529825 152529884 -50555648 - L2 LINE L2 0 3272 3214 243 232 35 60 chr5 152530021 152530123 -50555409 - MIR SINE MIR -60 148 71 470 277 40 51 chr5 152531435 152531612 -50553920 - L2 LINE L2 -629 2685 2511 1566 108 45 14 chr5 152532106 152532329 -50553203 + MER30 DNA MER1_type 1 230 0 256 268 39 47 chr5 152532561 152532688 -50552844 - MER5B DNA MER1_type -30 148 23 292 250 121 43 chr5 152535153 152535293 -50550239 - MIR SINE MIR -14 248 98 299 250 35 52 chr5 152535419 152535535 -50549997 + L2 LINE L2 3198 3311 -2 191 265 20 0 chr5 152535581 152535630 -50549902 + MIR SINE MIR 47 96 -166 455 234 125 109 chr5 152535757 152536206 -50549326 - L1ME4a LINE L1 -104 6017 5562 318 342 147 19 chr5 152536498 152537039 -50548493 + L2 LINE L2 2695 3313 0 215 253 145 0 chr5 152537264 152537347 -50548185 - MIR SINE MIR -76 186 92 406 295 62 0 chr5 152537678 152537807 -50547725 + MER91C DNA MER1_type 1 137 -3 339 194 16 0 chr5 152538425 152538487 -50547045 + MER115 DNA AcHobo 10 72 -621 5773 210 49 52 chr5 152538790 152540142 -50545390 + L1ME1 LINE L1 3665 4997 -1169 725 206 0 0 chr5 152540142 152540268 -50545264 + FLAM_C SINE Alu 1 126 -7 5773 210 49 52 chr5 152540268 152541359 -50544173 + L1ME1 LINE L1 4997 6090 -76 310 257 0 14 chr5 152541433 152541503 -50544029 + MER115 DNA AcHobo 625 693 0 264 319 112 37 chr5 152541673 152541861 -50543671 - MIR SINE MIR -2 260 59 182 236 91 18 chr5 152543020 152543075 -50542457 - MIR SINE MIR -12 250 192 669 230 61 61 chr5 152543101 152543362 -50542170 - MIR SINE MIR 0 262 2 371 337 76 45 chr5 152543900 152544389 -50541143 - L2 LINE L2 0 3313 2810 347 223 53 11 chr5 152544694 152544788 -50540744 - MLT1K LTR MaLR -6 582 485 214 194 28 0 chr5 152545309 152545381 -50540151 + (TA)n Simple_repeat Simple_repeat 1 74 0 721 94 0 0 chr5 152545385 152545481 -50540051 - AluSg/x SINE Alu -15 295 200 360 94 0 0 chr5 152545500 152545542 -50539990 + (TG)n Simple_repeat Simple_repeat 1 95 0 360 94 0 0 chr5 152545542 152545595 -50539937 + (TG)n Simple_repeat Simple_repeat 2 54 0 2181 102 0 3 chr5 152545634 152545917 -50539615 - AluSx SINE Alu -30 282 1 21 57 0 0 chr5 152545922 152545957 -50539575 + AT_rich Low_complexity Low_complexity 1 35 0 279 54 0 0 chr5 152546010 152546047 -50539485 + (CA)n Simple_repeat Simple_repeat 2 38 0 2132 105 37 3 chr5 152546058 152546352 -50539180 - AluSx SINE Alu -8 304 1 249 139 0 0 chr5 152546446 152546489 -50539043 + (CA)n Simple_repeat Simple_repeat 2 44 0 1718 116 0 4 chr5 152546500 152546733 -50538799 - AluSg/x SINE Alu -3 307 76 513 292 68 34 chr5 152547157 152547626 -50537906 - HAL1 LINE L1 -895 1612 1128 251 272 22 66 chr5 152547875 152548011 -50537521 - HAL1b LINE L1 -858 490 361 1119 270 129 7 chr5 152548883 152549317 -50536215 + LTR16C LTR ERVL 5 491 0 682 301 42 10 chr5 152549452 152549741 -50535791 + L1MC4a LINE L1 5611 5908 -1900 233 137 0 78 chr5 152549761 152549812 -50535720 - L2 LINE L2 -9 3304 3258 312 70 0 0 chr5 152550026 152550069 -50535463 + (TG)n Simple_repeat Simple_repeat 2 44 0 1987 130 7 13 chr5 152550201 152550500 -50535032 + AluSx SINE Alu 1 297 -15 201 39 0 0 chr5 152550520 152550546 -50534986 + (CA)n Simple_repeat Simple_repeat 1 26 0 1955 100 0 19 chr5 152553351 152553612 -50531920 + AluSx SINE Alu 33 288 -24 248 162 0 81 chr5 152553656 152553730 -50531802 + L1ME LINE L1 5382 5449 -672 199 280 93 9 chr5 152553827 152553934 -50531598 + L2 LINE L2 2968 3083 -189 255 243 279 0 chr5 152554041 152554181 -50531351 - MIR SINE MIR 0 262 84 410 319 87 0 chr5 152554944 152555129 -50530403 + MIR SINE MIR 46 246 -16 364 281 23 23 chr5 152555781 152555909 -50529623 + MIR SINE MIR 18 145 -63 438 243 69 64 chr5 152555918 152556120 -50529412 - L2 LINE L2 -5 3308 3106 1727 155 7 56 chr5 152556439 152556743 -50528789 - AluJo SINE Alu -23 289 1 193 296 42 0 chr5 152557074 152557145 -50528387 - MIR SINE MIR -78 184 111 318 227 227 25 chr5 152557383 152557546 -50527986 + L2 LINE L2 3118 3313 0 265 239 94 34 chr5 152559110 152559227 -50526305 - MIR3 SINE MIR -24 184 61 355 214 0 24 chr5 152559747 152559831 -50525701 + MIR SINE MIR 70 151 -111 1848 162 10 26 chr5 152559832 152560135 -50525397 + AluJo SINE Alu 1 298 -14 197 340 64 0 chr5 152560994 152561088 -50524444 + MIR SINE MIR 38 137 -71 200 248 0 147 chr5 152561257 152561300 -50524232 + MIR SINE MIR 153 201 -61 360 0 0 0 chr5 152561300 152561340 -50524192 + (TG)n Simple_repeat Simple_repeat 2 41 0 200 248 0 147 chr5 152561340 152561425 -50524107 + MIR SINE MIR 201 262 0 616 319 26 22 chr5 152562197 152562423 -50523109 + L1MC/D LINE L1 5525 5751 -2057 1797 167 70 6 chr5 152563471 152563812 -50521720 - MLT1A1 LTR MaLR 0 365 3 302 235 31 31 chr5 152564070 152564168 -50521364 + L3 LINE CR1 1220 1317 -260 1318 167 0 9 chr5 152564192 152564402 -50521130 + AluJo SINE Alu 83 290 -22 296 249 67 55 chr5 152564422 152564587 -50520945 + L3 LINE CR1 1332 1498 -79 198 354 24 0 chr5 152564634 152564716 -50520816 + L2 LINE L2 3187 3270 -43 1719 176 0 14 chr5 152565115 152565411 -50520121 + AluJo SINE Alu 1 292 -20 244 213 50 113 chr5 152565423 152565503 -50520029 + MIR SINE MIR 84 158 -104 2500 118 30 55 chr5 152565747 152565860 -50519672 + MSTA LTR MaLR 1 115 -313 2094 151 0 6 chr5 152565860 152566172 -50519360 - AluSx SINE Alu -2 310 1 2500 118 30 55 chr5 152566172 152566497 -50519035 + MSTA LTR MaLR 115 428 0 193 315 45 11 chr5 152567076 152567165 -50518367 - L2 LINE L2 0 3272 3181 182 309 0 0 chr5 152567882 152567937 -50517595 + L2 LINE L2 3204 3258 -14 453 297 132 60 chr5 152568485 152568751 -50516781 + MLT1H LTR MaLR 36 320 -229 609 244 16 0 chr5 152568813 152568940 -50516592 + MLT1H LTR MaLR 420 548 -1 1389 309 56 34 chr5 152568940 152569703 -50515829 + L2 LINE L2 2198 2977 -337 542 224 0 8 chr5 152569787 152569912 -50515620 + L2 LINE L2 3190 3313 0 265 291 135 97 chr5 152569941 152570384 -50515148 - L2 LINE L2 0 3272 2813 2180 128 13 0 chr5 152570495 152570799 -50514733 + AluSx SINE Alu 1 308 -4 2139 112 0 36 chr5 152570991 152571296 -50514236 + AluSx SINE Alu 1 294 -18 459 0 0 0 chr5 152571327 152571378 -50514154 + (CA)n Simple_repeat Simple_repeat 1 51 0 297 304 0 0 chr5 152573093 152573172 -50512360 + (CA)n Simple_repeat Simple_repeat 2 80 0 231 226 151 28 chr5 152573523 152573629 -50511903 - L2 LINE L2 -4 3268 3150 235 299 43 34 chr5 152574523 152574640 -50510892 + L2 LINE L2 3176 3293 -20 989 182 0 12 chr5 152575423 152575593 -50509939 + AluJb SINE Alu 137 304 -8 440 252 94 0 chr5 152576097 152576224 -50509308 + L2 LINE L2 3134 3272 0 2600 62 0 0 chr5 152576327 152576631 -50508901 - AluY SINE Alu -7 304 1 369 336 44 7 chr5 152577654 152577791 -50507741 + MIR SINE MIR 2 143 -119 279 289 54 60 chr5 152578347 152578513 -50507019 + MIR SINE MIR 95 259 -3 279 79 0 0 chr5 152578515 152578553 -50506979 + (TG)n Simple_repeat Simple_repeat 1 38 0 365 247 41 41 chr5 152578553 152578699 -50506833 + HAL1b LINE L1 1201 1346 -2 467 262 48 32 chr5 152579053 152579179 -50506353 + L2 LINE L2 3143 3270 -2 182 345 35 0 chr5 152579355 152579413 -50506119 - L2 LINE L2 -20 3293 3234 459 257 110 97 chr5 152579559 152580104 -50505428 - L2 LINE L2 -256 3057 2499 390 274 89 66 chr5 152580128 152580387 -50505145 + L2 LINE L2 3049 3313 0 256 210 95 56 chr5 152580451 152580577 -50504955 - MLT1K LTR MaLR -2 588 410 492 205 26 66 chr5 152580842 152580993 -50504539 - L2 LINE L2 -853 2461 2317 839 296 56 27 chr5 152581000 152581338 -50504194 - MLT1K LTR MaLR -26 562 215 704 294 50 18 chr5 152581333 152581612 -50503920 - MLT1K LTR MaLR -168 420 133 * 378 303 86 7 chr5 152581719 152581871 -50503661 - L2 LINE L2 -1003 2311 2148 847 257 36 5 chr5 152581974 152582196 -50503336 - MIR SINE MIR -6 256 28 1031 205 19 5 chr5 152583939 152584149 -50501383 - MER20 DNA MER1_type 0 219 7 279 281 0 0 chr5 152585078 152585142 -50500390 + MER102a DNA MER1_type 3 66 -264 638 186 80 80 chr5 152585258 152585484 -50500048 + MER102a DNA MER1_type 104 329 -1 609 219 80 0 chr5 152585583 152585734 -50499798 - L2 LINE L2 -712 2602 2440 195 69 0 0 chr5 152589682 152589711 -50495821 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 1591 93 0 0 chr5 152590038 152590242 -50495290 - AluSg/x SINE Alu -39 273 70 1985 115 11 3 chr5 152590543 152590830 -50494702 - AluSx SINE Alu -23 289 1 180 0 0 0 chr5 152590851 152590871 -50494661 + (T)n Simple_repeat Simple_repeat 1 20 0 271 338 14 40 chr5 152592611 152592759 -50492773 + MER5A DNA MER1_type 41 184 -5 306 143 0 0 chr5 152592962 152593025 -50492507 + (TG)n Simple_repeat Simple_repeat 2 64 0 1573 245 70 78 chr5 152593194 152593531 -50492001 + L2 LINE L2 2338 2676 -637 1758 162 3 57 chr5 152593531 152593846 -50491686 - AluJb SINE Alu -14 298 1 1573 245 70 78 chr5 152593846 152593857 -50491675 + L2 LINE L2 2676 2686 -627 1956 114 0 0 chr5 152593857 152594112 -50491420 - AluSx SINE Alu -13 299 45 1573 245 70 78 chr5 152594112 152594728 -50490804 + L2 LINE L2 2686 3311 -2 184 323 135 41 chr5 152594767 152595033 -50490499 - L2 LINE L2 -97 3216 2926 184 100 100 0 chr5 152595142 152595172 -50490360 - L2 LINE L2 -1783 1531 1499 204 234 0 43 chr5 152595347 152595394 -50490138 - MER91 DNA MER1_type -5 185 141 204 333 0 0 chr5 152595434 152595491 -50490041 + L2 LINE L2 3206 3262 -10 479 254 223 11 chr5 152595903 152596163 -50489369 - L2 LINE L2 -1 3312 2998 21 0 0 0 chr5 152597100 152597121 -50488411 + AT_rich Low_complexity Low_complexity 1 21 0 202 179 36 0 chr5 152598418 152598474 -50487058 + (TA)n Simple_repeat Simple_repeat 2 59 0 565 248 133 60 chr5 152598928 152599327 -50486205 + HsTC2b DNA Tc2 1 604 -316 295 138 75 12 chr5 152599319 152599399 -50486133 + HsTC2b DNA Tc2 787 871 -47 * 213 304 0 18 chr5 152599629 152599685 -50485847 - MIR SINE MIR -185 77 23 233 333 0 0 chr5 152599933 152599999 -50485533 + L2 LINE L2 3205 3270 -2 21 57 0 0 chr5 152600901 152600936 -50484596 + AT_rich Low_complexity Low_complexity 1 35 0 959 211 50 46 chr5 152601345 152601605 -50483927 + MIR SINE MIR 2 262 0 339 253 13 0 chr5 152602180 152602259 -50483273 + LTR40c LTR ERVL 151 230 -235 549 227 122 23 chr5 152602385 152602557 -50482975 + LTR40a LTR ERVL 316 504 -15 1971 253 110 18 chr5 152602721 152603501 -50482031 - L1ME2 LINE L1 0 6164 5313 21 36 0 0 chr5 152604352 152604380 -50481152 + AT_rich Low_complexity Low_complexity 1 28 0 257 222 0 0 chr5 152604780 152604834 -50480698 + AluS SINE Alu 5 58 -250 856 327 65 18 chr5 152604981 152605424 -50480108 - L2 LINE L2 -45 3268 2805 260 246 0 16 chr5 152606023 152606084 -50479448 + L2 LINE L2 3209 3268 -4 605 180 107 33 chr5 152606491 152606613 -50478919 - FLAM_A SINE Alu -1 132 2 21 36 0 0 chr5 152607356 152607384 -50478148 + AT_rich Low_complexity Low_complexity 1 28 0 491 243 114 36 chr5 152608509 152608789 -50476743 - L1ME4a LINE L1 -76 6045 5744 2053 152 0 3 chr5 152609332 152609642 -50475890 - AluSx SINE Alu -3 309 1 2387 84 0 3 chr5 152610223 152610522 -50475010 - AluSg SINE Alu -5 305 8 261 154 15 0 chr5 152611046 152611111 -50474421 - L1MC/D LINE L1 -452 5881 5816 1883 175 33 39 chr5 152611122 152611676 -50473856 - MLT2A2 LTR ERVL -8 546 1 2025 173 34 7 chr5 152611677 152612093 -50473439 - L1MC/D LINE L1 -533 5811 5385 385 245 100 54 chr5 152614185 152614426 -50471106 - HAL1 LINE L1 -2 2505 2254 443 228 129 10 chr5 152614447 152614640 -50470892 - HAL1 LINE L1 -297 2210 1995 326 293 107 87 chr5 152614963 152615366 -50470166 + L2 LINE L2 2848 3258 -14 2481 51 0 0 chr5 152616132 152616424 -50469108 - AluY SINE Alu -19 292 1 654 248 196 24 chr5 152616528 152616952 -50468580 - HAL1 LINE L1 -794 1713 1217 493 216 209 0 chr5 152616999 152617152 -50468380 - MIR SINE MIR -37 225 41 27 0 0 0 chr5 152617489 152617516 -50468016 + AT_rich Low_complexity Low_complexity 1 27 0 2153 132 13 0 chr5 152618861 152619165 -50466367 - AluSx SINE Alu -4 308 1 365 305 133 95 chr5 152619276 152619719 -50465813 + L2 LINE L2 2813 3272 0 451 204 0 11 chr5 152619748 152619841 -50465691 - L2 LINE L2 0 3313 3222 1443 230 83 2 chr5 152619968 152620411 -50465121 - L1M4 LINE L1 -1710 4436 3958 226 116 70 0 chr5 152620567 152620610 -50464922 + MLT1A1 LTR MaLR 1 46 -319 1512 224 89 10 chr5 152620632 152621025 -50464507 + MLT1A2-int LTR MaLR 1312 1735 0 1273 191 97 66 chr5 152621025 152621387 -50464145 + MLT1A2 LTR MaLR 1 373 -1 1577 89 0 49 chr5 152622072 152622296 -50463236 + AluSg/x SINE Alu 80 292 -18 351 0 0 0 chr5 152622327 152622366 -50463166 + (CA)n Simple_repeat Simple_repeat 1 39 0 204 67 0 0 chr5 152623900 152623930 -50461602 + (TAGG)n Simple_repeat Simple_repeat 2 31 0 2296 107 0 25 chr5 152624011 152624329 -50461203 + AluSq SINE Alu 1 310 -3 2048 295 127 35 chr5 152625233 152626239 -50459293 + L2 LINE L2 1671 2769 -545 390 212 124 102 chr5 152626339 152626565 -50458967 + L2 LINE L2 3080 3310 -3 1126 239 67 6 chr5 152626589 152627071 -50458461 - MLT1E LTR MaLR 0 593 6 204 246 18 18 chr5 152627669 152627726 -50457806 + (TAG)n Simple_repeat Simple_repeat 2 58 0 236 301 27 0 chr5 152627818 152627891 -50457641 - MIR SINE MIR -123 139 65 2972 165 39 2 chr5 152627996 152628504 -50457028 - MER1A DNA MER1_type 0 527 1 388 271 164 53 chr5 152629224 152629449 -50456083 - MIR SINE MIR -12 250 1 3319 169 20 28 chr5 152629664 152630272 -50455260 - MER6A DNA MER2_type 0 605 3 21 0 0 0 chr5 152631110 152631131 -50454401 + AT_rich Low_complexity Low_complexity 1 21 0 2887 207 93 14 chr5 152631321 152631766 -50453766 - L1MB7 LINE L1 0 6184 5776 1851 127 0 48 chr5 152631766 152632080 -50453452 + AluSx SINE Alu 1 299 -13 2887 207 93 14 chr5 152632080 152632393 -50453139 - L1MB7 LINE L1 -408 5776 5366 3595 163 30 39 chr5 152632526 152633238 -50452294 - L1MB3 LINE L1 -62 6121 5417 344 316 110 14 chr5 152633596 152633805 -50451727 + MIR SINE MIR 34 262 0 1624 178 22 3 chr5 152634245 152634559 -50450973 - L1MB1 LINE L1 -1 6167 5848 1847 206 72 28 chr5 152634559 152635019 -50450513 + L1MB7 LINE L1 5705 6184 0 1349 162 9 14 chr5 152636611 152636821 -50448711 - THE1C LTR MaLR -166 209 1 328 125 0 0 chr5 152636951 152636999 -50448533 - MADE1 DNA Mariner -30 50 3 2398 80 0 3 chr5 152637700 152638012 -50447520 + AluSq SINE Alu 1 311 -2 313 277 64 54 chr5 152638055 152638351 -50447181 - L1MEc LINE L1 -4257 2139 1841 621 228 7 0 chr5 152638364 152638509 -50447023 - L1MD3 LINE L1 -720 7275 7130 267 230 81 11 chr5 152638560 152638647 -50446885 + MER46C DNA MER2_type 235 327 -11 21 0 0 0 chr5 152639302 152639323 -50446209 + AT_rich Low_complexity Low_complexity 1 21 0 2202 106 0 0 chr5 152640301 152640602 -50444930 + AluSg SINE Alu 1 301 -9 608 204 152 47 chr5 152643713 152643924 -50441608 + MIR SINE MIR 29 261 -1 2118 103 3 3 chr5 152644176 152644477 -50441055 + AluSx SINE Alu 6 306 -6 213 39 0 0 chr5 152644566 152644592 -50440940 + (T)n Simple_repeat Simple_repeat 1 26 0 1539 111 22 9 chr5 152644614 152644840 -50440692 - MER30 DNA MER1_type 0 230 2 510 238 161 18 chr5 152645893 152646061 -50439471 + L2 LINE L2 3120 3311 -2 727 277 29 36 chr5 152647032 152647308 -50438224 + MLT1J LTR MaLR 22 335 -176 698 288 108 26 chr5 152647666 152647972 -50437560 - L2 LINE L2 -1 3312 2982 640 338 44 53 chr5 152648360 152648680 -50436852 - L2 LINE L2 -5 3267 2951 297 313 227 21 chr5 152648851 152649225 -50436307 - L2 LINE L2 -711 2603 2153 424 312 130 22 chr5 152649380 152649611 -50435921 - MIR SINE MIR 0 262 7 1256 185 122 54 chr5 152649894 152650246 -50435286 - MLT1B LTR MaLR -4 386 11 655 263 50 42 chr5 152650842 152651082 -50434450 - MIR SINE MIR -18 244 3 225 0 0 0 chr5 152651551 152651576 -50433956 + (GGCTG)n Simple_repeat Simple_repeat 3 27 0 225 139 0 0 chr5 152654267 152654310 -50431222 + (GA)n Simple_repeat Simple_repeat 2 44 0 718 195 136 0 chr5 152654967 152655121 -50430411 + MER96 DNA MER1_type 1 175 0 302 293 12 0 chr5 152656485 152656567 -50428965 - MIR SINE MIR -169 93 11 323 306 130 11 chr5 152656597 152656818 -50428714 - MIR3 SINE MIR -2 260 11 2077 107 0 10 chr5 152657743 152658042 -50427490 - AluSx SINE Alu -16 296 1 498 298 19 0 chr5 152659111 152659272 -50426260 - MER113 DNA MER1_type? -5 516 353 554 254 172 17 chr5 152659276 152659508 -50426024 - LTR16B LTR ERVL -1 463 196 521 229 106 11 chr5 152660106 152660285 -50425247 - MER69 DNA AcHobo -1 2525 2330 203 378 31 0 chr5 152662122 152662220 -50423312 - MER5A DNA MER1_type -26 163 63 263 207 0 7 chr5 152662452 152662565 -50422967 - MER91 DNA MER1_type -10 180 1 48 53 0 0 chr5 152664399 152664475 -50421057 + AT_rich Low_complexity Low_complexity 1 76 0 270 0 0 0 chr5 152664493 152664523 -50421009 + (CA)n Simple_repeat Simple_repeat 2 31 0 847 156 6 72 chr5 152665015 152665182 -50420350 - FRAM SINE Alu -10 156 1 217 345 24 0 chr5 152665347 152665431 -50420101 + MER5B DNA MER1_type 6 91 -87 666 236 135 39 chr5 152666350 152666778 -50418754 - MLT1H1 LTR MaLR -8 547 22 304 214 14 0 chr5 152668950 152669020 -50416512 - MLT1K LTR MaLR 0 588 518 237 349 12 0 chr5 152669120 152669206 -50416326 + CT-rich Low_complexity Low_complexity 3 89 0 202 280 60 0 chr5 152672289 152672339 -50413193 + L2 LINE L2 3200 3252 -20 427 241 28 0 chr5 152672724 152672832 -50412700 + Charlie8 DNA MER1_type 151 261 -2156 348 189 0 68 chr5 152672980 152673054 -50412478 - L1MC4 LINE L1 -1339 6703 6635 374 278 0 0 chr5 152673100 152673190 -50412342 + MIR SINE MIR 157 246 -16 383 205 13 0 chr5 152675368 152675446 -50410086 - L1ME2 LINE L1 -10 6154 6076 510 253 136 0 chr5 152675924 152676086 -50409446 - MER5A DNA MER1_type -3 186 3 811 218 113 88 chr5 152676274 152676490 -50409042 + MLT1E2 LTR MaLR 1 210 -295 2275 90 0 7 chr5 152676490 152676789 -50408743 + AluSg SINE Alu 1 297 -13 811 218 113 88 chr5 152676789 152677137 -50408395 + MLT1E2 LTR MaLR 210 475 -30 2086 130 0 3 chr5 152678684 152678991 -50406541 + AluSx SINE Alu 1 306 -6 313 68 83 23 chr5 152678991 152679124 -50406408 + (TA)n Simple_repeat Simple_repeat 2 142 0 26 64 0 0 chr5 152679127 152679174 -50406358 + AT_rich Low_complexity Low_complexity 1 47 0 609 254 51 23 chr5 152679726 152679943 -50405589 - MIR SINE MIR -3 259 37 2015 156 0 0 chr5 152680434 152680729 -50404803 + AluSx SINE Alu 2 296 -16 4677 72 18 37 chr5 152680880 152681929 -50403603 + MER11A LTR ERVK 1 1266 0 366 61 0 0 chr5 152682041 152682090 -50403442 + (TG)n Simple_repeat Simple_repeat 2 50 0 225 244 256 0 chr5 152683756 152683842 -50401690 + MIR SINE MIR 58 165 -97 2312 96 6 6 chr5 152684282 152684594 -50400938 + AluSp SINE Alu 2 313 0 464 317 82 24 chr5 152685400 152685693 -50399839 + L2 LINE L2 2435 2744 -570 621 274 122 18 chr5 152685787 152686116 -50399416 + L2 LINE L2 2950 3312 -1 1459 164 40 43 chr5 152687613 152687937 -50397595 - MER33 DNA MER1_type -1 323 1 225 253 121 24 chr5 152688216 152688299 -50397233 + MIR SINE MIR 20 110 -152 879 232 69 0 chr5 152688636 152688869 -50396663 + MIR SINE MIR 3 251 -11 216 226 19 0 chr5 152688911 152688964 -50396568 - L2 LINE L2 -5 3267 3214 184 136 23 45 chr5 152690037 152690081 -50395451 - MIR SINE MIR -67 141 99 1453 183 138 20 chr5 152690352 152690701 -50394831 + MLT1B LTR MaLR 1 390 0 456 241 221 55 chr5 152690874 152691164 -50394368 - L1MC4a LINE L1 -171 5950 5613 743 288 20 20 chr5 152691385 152691635 -50393897 - L1MC4a LINE L1 -1869 5939 5690 403 272 58 0 chr5 152691855 152691958 -50393574 + L2 LINE L2 3145 3253 -19 1794 183 0 0 chr5 152692564 152692854 -50392678 - AluJo SINE Alu -22 290 1 237 163 0 0 chr5 152694012 152694061 -50391471 + (TG)n Simple_repeat Simple_repeat 2 50 0 2374 88 0 7 chr5 152695251 152695557 -50389975 - AluSg SINE Alu -6 304 1 358 323 38 13 chr5 152696855 152697013 -50388519 + MIR SINE MIR 45 206 -56 320 297 69 0 chr5 152697050 152697151 -50388381 - L2 LINE L2 -14 3258 3151 219 297 55 55 chr5 152698297 152698425 -50387107 + L2 LINE L2 3145 3272 0 600 231 17 40 chr5 152698551 152698724 -50386808 + MIR SINE MIR 91 259 -3 183 257 214 36 chr5 152698801 152698941 -50386591 + L2 LINE L2 2659 2823 -491 417 271 87 63 chr5 152698987 152699367 -50386165 + L2 LINE L2 2923 3311 -2 832 149 0 0 chr5 152700115 152700236 -50385296 - FLAM_C SINE Alu -22 121 1 251 337 31 20 chr5 152700790 152700888 -50384644 + L2 LINE L2 3121 3219 -53 6647 136 65 12 chr5 152701146 152702231 -50383301 - Tigger1 DNA MER2_type -1273 1145 3 25 31 0 0 chr5 152702233 152702265 -50383267 + AT_rich Low_complexity Low_complexity 1 32 0 1417 158 77 35 chr5 152702293 152702603 -50382929 - MER33 DNA MER1_type -1 323 1 2049 142 9 38 chr5 152702661 152703000 -50382532 + MER1B DNA MER1_type 1 329 -10 2504 173 46 6 chr5 152703449 152703924 -50381608 + Tigger1 DNA MER2_type 1925 2418 0 795 244 84 0 chr5 152703952 152704177 -50381355 - MIR SINE MIR -18 244 1 1485 129 26 0 chr5 152705440 152705673 -50379859 - AluSg/x SINE Alu -6 304 66 2084 131 3 0 chr5 152705943 152706233 -50379299 + AluSx SINE Alu 1 291 -21 228 318 47 68 chr5 152707047 152707195 -50378337 - MER5A DNA MER1_type -19 170 26 25 0 0 0 chr5 152707493 152707518 -50378014 + AT_rich Low_complexity Low_complexity 1 25 0 1660 164 55 118 chr5 152707799 152708239 -50377293 + L1MB3 LINE L1 5715 6126 -57 275 279 58 0 chr5 152708818 152708904 -50376628 - MIR SINE MIR -113 149 59 351 191 21 21 chr5 152709803 152709897 -50375635 - MIR SINE MIR -65 197 104 405 157 14 0 chr5 152709897 152709967 -50375565 + MER75 DNA T2_type 1 71 -443 * 1212 157 39 51 chr5 152709949 152710204 -50375328 + MER75 DNA T2_type 11 262 -252 217 289 22 44 chr5 152710220 152710310 -50375222 - MIR SINE MIR -161 101 14 363 278 24 24 chr5 152710866 152710992 -50374540 + L2 LINE L2 2934 3059 -213 712 274 42 17 chr5 152711170 152711407 -50374125 + MIR SINE MIR 15 257 -5 356 269 236 19 chr5 152711806 152711989 -50373543 + MER20B DNA MER1_type 1 219 0 219 263 79 13 chr5 152712028 152712104 -50373428 - MIR SINE MIR -51 211 131 656 274 52 20 chr5 152713595 152713843 -50371689 - MIR SINE MIR -1 261 6 214 321 47 19 chr5 152713942 152714048 -50371484 + MIR SINE MIR 125 233 -29 245 309 0 85 chr5 152714699 152714793 -50370739 + L2 LINE L2 3223 3308 -5 733 284 15 0 chr5 152714795 152714992 -50370540 + L2 LINE L2 1401 1600 -1714 2093 254 205 11 chr5 152715013 152715871 -50369661 + L2 LINE L2 1952 2976 -338 258 261 0 0 chr5 152715918 152715983 -50369549 - L2 LINE L2 -272 3041 2977 271 200 0 29 chr5 152716008 152716078 -50369454 + L1MC5 LINE L1 7610 7677 -284 1840 274 75 59 chr5 152716110 152717185 -50368347 + L1MEc LINE L1 36 1128 -5268 716 215 18 48 chr5 152717224 152717452 -50368080 + L1MC5 LINE L1 7706 7926 -35 2179 131 0 0 chr5 152718041 152718347 -50367185 - AluSg SINE Alu -4 306 1 541 294 90 35 chr5 152720255 152720600 -50364932 - L1 LINE L1 -3052 3094 2731 21 71 0 0 chr5 152721178 152721220 -50364312 + AT_rich Low_complexity Low_complexity 1 42 0 717 284 50 0 chr5 152723667 152723889 -50361643 + MIR SINE MIR 18 250 -12 203 0 37 0 chr5 152728297 152728324 -50357208 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 494 243 139 0 chr5 152728688 152728832 -50356700 + MIR SINE MIR 28 191 -71 1854 104 0 28 chr5 152733362 152733613 -50351919 + AluSx SINE Alu 37 280 -32 212 0 36 0 chr5 152733615 152733643 -50351889 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 536 290 48 44 chr5 152734240 152734492 -50351040 - MIR SINE MIR -7 255 3 23 33 0 0 chr5 152735884 152735914 -50349618 + AT_rich Low_complexity Low_complexity 1 30 0 338 292 35 44 chr5 152736257 152736370 -50349162 - L2 LINE L2 0 3272 3161 191 100 0 0 chr5 152737972 152738002 -50347530 - L2 LINE L2 0 3272 3243 329 246 146 77 chr5 152738300 152738520 -50347012 + MIR SINE MIR 28 262 0 462 282 93 42 chr5 152739323 152739582 -50345950 + L2 LINE L2 3042 3313 0 565 264 160 35 chr5 152739675 152740187 -50345345 + MLT1H1 LTR MaLR 16 555 0 278 255 32 32 chr5 152741055 152741149 -50344383 + L2 LINE L2 3200 3293 -20 188 29 0 88 chr5 152741149 152741183 -50344349 + (A)n Simple_repeat Simple_repeat 1 31 0 675 241 126 14 chr5 152741436 152741643 -50343889 - MIR SINE MIR -2 260 31 23 33 0 0 chr5 152741786 152741816 -50343716 + AT_rich Low_complexity Low_complexity 1 30 0 251 219 151 0 chr5 152741998 152742071 -50343461 - MIR SINE MIR -89 173 90 36154 41 5 1 chr5 152742609 152746929 -50338603 + L1P LINE L1 1 4340 -1806 5763 89 0 9 chr5 152747031 152747839 -50337693 + HERVH LTR ERV1 2187 2987 -4726 845 162 20 0 chr5 152747833 152747981 -50337551 + HERVH LTR ERV1 3140 3290 -4423 * 3465 111 4 6 chr5 152747971 152748474 -50337058 + HERVH LTR ERV1 3492 3993 -3720 4218 143 22 1 chr5 152748476 152749125 -50336407 + HERVH LTR ERV1 4488 5149 -2564 1494 106 18 5 chr5 152749126 152749343 -50336189 + HERVH LTR ERV1 5600 5819 -1894 * 1918 102 36 1 chr5 152749341 152749688 -50335844 + HERVH LTR ERV1 7322 7713 0 1353 148 96 122 chr5 152749688 152750148 -50335384 + LTR7 LTR ERV1 1 448 -2 2171 146 16 18 chr5 152750149 152750534 -50334998 - L1MA7 LINE L1 -21 6270 5887 779 193 66 66 chr5 152750709 152750922 -50334610 + MER20 DNA MER1_type 2 214 -5 367 319 90 16 chr5 152750989 152751177 -50334355 - MIR SINE MIR -26 236 35 349 289 164 6 chr5 152752817 152752976 -50332556 + MLT1I LTR MaLR 224 407 -2 245 319 42 80 chr5 152753083 152753346 -50332186 + L2 LINE L2 2723 2975 -339 408 228 47 16 chr5 152755082 152755209 -50330323 - MIR SINE MIR -61 201 71 285 261 53 0 chr5 152755651 152755761 -50329771 - MIR SINE MIR -65 143 30 848 146 0 15 chr5 152756098 152756235 -50329297 - FLAM_C SINE Alu -1 142 8 444 37 0 0 chr5 152756499 152756553 -50328979 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 574 250 6 12 chr5 152759124 152759284 -50326248 + MER5A DNA MER1_type 12 170 -19 186 43 0 0 chr5 152760434 152760457 -50325075 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 350 248 26 18 chr5 152761462 152761575 -50323957 - MIR SINE MIR -50 212 99 5126 276 107 14 chr5 152761588 152763608 -50321924 + L2 LINE L2 567 2775 -539 996 282 83 38 chr5 152763615 152764212 -50321320 + L2 LINE L2 582 3308 -5 276 266 38 0 chr5 152764223 152764302 -50321230 - MIR SINE MIR -161 101 20 207 338 0 25 chr5 152764445 152764525 -50321007 + MIR SINE MIR 5 82 -180 3877 219 57 30 chr5 152764907 152765145 -50320387 - L1MD2 LINE L1 -434 5925 5695 2057 139 7 0 chr5 152765145 152765439 -50320093 - AluSq SINE Alu -17 296 1 3877 219 57 30 chr5 152765439 152765665 -50319867 - L1MD2 LINE L1 -664 5695 5477 636 195 39 0 chr5 152765665 152765793 -50319739 - FLAM_A SINE Alu 0 133 1 3877 219 57 30 chr5 152765793 152766111 -50319421 - L1MD2 LINE L1 -882 5477 5169 2045 147 42 31 chr5 152766111 152766471 -50319061 + THE1B LTR MaLR 1 364 0 3877 219 57 30 chr5 152766471 152767371 -50318161 - L1MD2 LINE L1 -1190 5169 4196 778 223 94 0 chr5 152768304 152768537 -50316995 - L2 LINE L2 -1362 1952 1698 291 157 0 0 chr5 152768537 152768588 -50316944 + CT-rich Low_complexity Low_complexity 4 54 0 192 208 21 0 chr5 152768595 152768643 -50316889 - L2 LINE L2 -1621 1693 1645 423 79 29 0 chr5 152768738 152768811 -50316721 + MER51A LTR ERV1 1 59 -580 4346 105 29 2 chr5 152768813 152769425 -50316107 + MER51C LTR ERV1 1 629 -11 3392 291 65 24 chr5 152769435 152770828 -50314704 - L2 LINE L2 -1756 1558 108 552 280 26 36 chr5 152771651 152771844 -50313688 + MIR SINE MIR 38 228 -34 313 292 103 79 chr5 152772402 152772731 -50312801 - L2 LINE L2 0 3272 2936 569 266 14 0 chr5 152773398 152773537 -50311995 - MIR SINE MIR -12 250 110 393 302 8 8 chr5 152774451 152774577 -50310955 - L2 LINE L2 0 3272 3147 1154 266 63 63 chr5 152774946 152775788 -50309744 - L2 LINE L2 -2 3311 2462 198 0 0 0 chr5 152775788 152775810 -50309722 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1154 266 63 63 chr5 152775810 152775861 -50309671 - L2 LINE L2 -851 2462 2412 535 283 68 63 chr5 152775893 152776260 -50309272 + MLT1I LTR MaLR 19 387 -22 315 344 31 6 chr5 152776321 152776484 -50309048 - L2 LINE L2 -188 3084 2918 266 310 60 63 chr5 152776535 152776819 -50308713 - L2 LINE L2 -467 2847 2565 231 239 148 0 chr5 152776935 152777023 -50308509 + L1ME4a LINE L1 6018 6118 -3 2750 29 0 3 chr5 152778747 152779055 -50306477 + AluY SINE Alu 1 307 -4 459 336 79 20 chr5 152779184 152779476 -50306056 + L2 LINE L2 2933 3241 -31 211 220 51 0 chr5 152779490 152779549 -50305983 + MIR SINE MIR 92 153 -109 2506 76 0 15 chr5 152779632 152779974 -50305558 - L1PA6 LINE L1 0 6154 5818 321 278 83 8 chr5 152779980 152780113 -50305419 - MIR3 SINE MIR -29 179 37 2176 118 7 3 chr5 152780511 152780807 -50304725 + AluSc SINE Alu 1 297 -12 872 218 21 40 chr5 152782281 152782544 -50302988 + LTR8 LTR ERV1 59 289 -434 1136 187 80 77 chr5 152782597 152782961 -50302571 + LTR8A LTR ERV1 301 665 -62 324 0 0 0 chr5 152782965 152783001 -50302531 + (CAA)n Simple_repeat Simple_repeat 1 36 0 392 299 80 44 chr5 152783025 152783107 -50302425 + L1MC4a LINE L1 4991 5069 -1077 3030 171 52 10 chr5 152783107 152783717 -50301815 + L1MA7 LINE L1 5654 6289 -2 392 299 80 44 chr5 152783717 152783885 -50301647 + L1MC4a LINE L1 5069 5250 -896 1252 302 44 35 chr5 152783897 152784576 -50300956 + L1MC4a LINE L1 5279 5963 -1845 222 171 0 0 chr5 152784576 152784617 -50300915 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 22 0 0 0 chr5 152784647 152784669 -50300863 + AT_rich Low_complexity Low_complexity 1 22 0 332 302 44 41 chr5 152786029 152786370 -50299162 + L1MC/D LINE L1 4787 5128 -1018 2147 157 142 13 chr5 152786411 152786903 -50298629 + MER39 LTR ERV1 1 707 0 310 164 71 129 chr5 152786904 152787044 -50298488 + L1MC/D LINE L1 5200 5331 -815 3573 114 15 19 chr5 152787044 152787570 -50297962 + L1PA15 LINE L1 5633 6156 -9 261 250 117 32 chr5 152787574 152787724 -50297808 + L1MC/D LINE L1 5315 5472 -865 288 57 0 0 chr5 152788069 152788104 -50297428 + L2 LINE L2 3187 3221 -92 2163 94 7 24 chr5 152788399 152788697 -50296835 + AluSx SINE Alu 1 293 -19 4034 42 0 10 chr5 152788697 152789194 -50296338 - L1P LINE L1 -865 5281 4790 1405 54 42 0 chr5 152789194 152789359 -50296173 + L1PA5 LINE L1 5972 6145 -9 29 0 0 0 chr5 152789359 152789388 -50296144 + AT_rich Low_complexity Low_complexity 1 29 0 260 208 42 0 chr5 152789615 152789711 -50295821 + (CA)n Simple_repeat Simple_repeat 1 100 0 1735 219 71 18 chr5 152789949 152790388 -50295144 + MLT1C LTR MaLR 6 467 0 271 299 81 69 chr5 152791174 152791522 -50294010 + L2 LINE L2 2624 2975 -339 345 303 66 0 chr5 152791679 152791801 -50293731 + L2 LINE L2 3180 3309 -4 197 242 21 53 chr5 152792613 152792708 -50292824 - MIR SINE MIR -21 241 150 232 279 29 29 chr5 152792811 152792915 -50292617 - L2 LINE L2 -872 2442 2339 1853 158 16 98 chr5 152792926 152793305 -50292227 + MER7A DNA MER2_type 1 346 0 254 253 220 14 chr5 152793307 152793437 -50292095 - MIR SINE MIR -54 154 3 1356 181 121 10 chr5 152794027 152794325 -50291207 + MER2 DNA MER2_type 1 331 -14 206 337 0 24 chr5 152796124 152796207 -50289325 - L2 LINE L2 -1 3312 3232 701 286 123 0 chr5 152798420 152798640 -50286892 + MIR SINE MIR 13 259 -3 2401 94 0 0 chr5 152798640 152798937 -50286595 + AluY SINE Alu 1 297 -14 323 291 48 10 chr5 152800868 152800971 -50284561 + MIR SINE MIR 91 197 -65 668 250 12 19 chr5 152801458 152801618 -50283914 - MIR SINE MIR 0 262 104 219 375 35 7 chr5 152801604 152801748 -50283784 + MIR SINE MIR 8 155 -107 * 368 323 65 19 chr5 152801758 152801913 -50283619 + MIR3 SINE MIR 47 208 0 198 0 0 0 chr5 152802896 152802918 -50282614 + (CA)n Simple_repeat Simple_repeat 1 22 0 257 51 26 0 chr5 152803406 152803445 -50282087 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 241 239 56 0 chr5 152805241 152805312 -50280220 - MIR SINE MIR -4 258 184 10020 34 3 1 chr5 152805444 152807335 -50278197 + L1PA4 LINE L1 4252 6147 -8 267 31 0 0 chr5 152808148 152808180 -50277352 + (GTGTG)n Simple_repeat Simple_repeat 3 34 0 600 296 34 48 chr5 152808210 152808501 -50277031 + L1ME LINE L1 5383 5669 -452 21 0 0 0 chr5 152809607 152809628 -50275904 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr5 152809682 152809718 -50275814 + AT_rich Low_complexity Low_complexity 1 36 0 613 251 220 28 chr5 152810026 152810483 -50275049 - L2 LINE L2 -1 3312 2770 971 231 31 101 chr5 152810553 152810939 -50274593 + LTR16A1 LTR ERVL 81 439 -18 291 208 0 0 chr5 152810950 152810998 -50274534 + L2 LINE L2 3149 3196 -76 387 239 48 54 chr5 152811006 152811059 -50274473 - L2 LINE L2 -568 2746 2694 2176 106 10 10 chr5 152811059 152811360 -50274172 + AluSp SINE Alu 1 301 -12 387 239 48 54 chr5 152811360 152811374 -50274158 - L2 LINE L2 -620 2694 2681 348 24 0 0 chr5 152811374 152811415 -50274117 + (TG)n Simple_repeat Simple_repeat 1 41 0 387 239 48 54 chr5 152811415 152811513 -50274019 - L2 LINE L2 -633 2681 2581 285 308 10 19 chr5 152812977 152813068 -50272464 + MER5B DNA MER1_type 28 119 -59 2180 122 10 0 chr5 152813068 152813362 -50272170 - AluSq SINE Alu -16 297 1 285 308 10 19 chr5 152813362 152813374 -50272158 + MER5B DNA MER1_type 119 130 -48 198 0 0 0 chr5 152813374 152813396 -50272136 + (T)n Simple_repeat Simple_repeat 1 22 0 1499 154 87 113 chr5 152813408 152813868 -50271664 + LTR7 LTR ERV1 1 448 -2 8463 93 53 38 chr5 152813870 152815722 -50269810 + HERVH LTR ERV1 1 1952 -5761 243 320 27 0 chr5 152815929 152816004 -50269528 - MIR SINE MIR -1 261 185 448 330 20 20 chr5 152816211 152816408 -50269124 - MIR SINE MIR -59 203 7 229 216 0 0 chr5 152816418 152816469 -50269063 + T-rich Low_complexity Low_complexity 1 51 0 180 273 0 124 chr5 152816471 152816592 -50268940 + L2 LINE L2 3166 3271 -42 387 0 0 0 chr5 152819512 152819555 -50265977 + (CA)n Simple_repeat Simple_repeat 1 43 0 355 214 24 12 chr5 152820358 152820442 -50265090 + MIR SINE MIR 71 155 -107 1364 186 88 4 chr5 152820570 152820833 -50264699 - AluJb SINE Alu -27 285 1 965 176 0 0 chr5 152820894 152821042 -50264490 + AluJb SINE Alu 140 287 -25 187 172 17 17 chr5 152821684 152821742 -50263790 + (TA)n Simple_repeat Simple_repeat 2 59 0 432 308 0 0 chr5 152822214 152822334 -50263198 + MIR SINE MIR 114 233 -29 240 344 159 12 chr5 152822409 152822572 -50262960 - MER5A DNA MER1_type -2 187 1 1564 219 53 46 chr5 152823233 152823626 -50261906 + MSTD LTR MaLR 1 396 0 395 341 88 0 chr5 152823675 152823845 -50261687 + LTR16A LTR ERVL 28 212 -238 385 292 100 0 chr5 152823907 152824037 -50261495 + LTR16A LTR ERVL 305 447 -3 3078 324 50 33 chr5 152824041 152824614 -50260918 + HERV16 LTR ERVL 2 563 -4433 1168 242 17 21 chr5 152824614 152824854 -50260678 + MER8 DNA MER2_type 1 239 0 3078 324 50 33 chr5 152824854 152825829 -50259703 + HERV16 LTR ERVL 563 1577 -3419 2584 169 12 33 chr5 152825920 152826137 -50259395 + L1MC1 LINE L1 5859 6079 -254 2186 121 0 7 chr5 152826137 152826442 -50259090 + AluSg SINE Alu 1 303 -7 2584 169 12 33 chr5 152826442 152826709 -50258823 + L1MC1 LINE L1 6079 6333 0 2473 342 47 26 chr5 152826847 152828249 -50257283 + ERVL LTR ERVL 3208 4638 -1126 859 350 35 25 chr5 152828324 152828933 -50256599 + ERVL LTR ERVL 4744 5358 -406 389 334 124 10 chr5 152829169 152829483 -50256049 + LTR16A LTR ERVL 101 450 0 676 121 61 0 chr5 152830351 152830450 -50255082 + AluSg/x SINE Alu 196 300 -12 2064 144 3 0 chr5 152830940 152831246 -50254286 - AluSx SINE Alu -5 307 1 574 296 63 21 chr5 152831272 152831729 -50253803 + LTR33A LTR ERVL 3 477 -46 317 282 52 32 chr5 152831744 152832034 -50253498 + L1MC4a LINE L1 4909 5203 -943 2012 266 85 11 chr5 152832107 152832797 -50252735 + L1MC4a LINE L1 5292 5638 -653 22 0 0 0 chr5 152832847 152832869 -50252663 + AT_rich Low_complexity Low_complexity 1 22 0 1483 272 137 44 chr5 152832897 152833911 -50251621 + L1MC4 LINE L1 6167 7360 -682 831 206 110 116 chr5 152833894 152834419 -50251113 - L1M4 LINE L1 -2789 3357 2830 * 234 45 68 0 chr5 152834419 152834463 -50251069 + (TA)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr5 152834467 152834488 -50251044 + (GA)n Simple_repeat Simple_repeat 2 22 0 1953 124 11 0 chr5 152834488 152834761 -50250771 - AluSg SINE Alu -34 276 1 831 206 110 116 chr5 152834761 152834831 -50250701 - L1M4 LINE L1 -3317 2829 2760 366 267 10 0 chr5 152835333 152835434 -50250098 - L1M4 LINE L1 -3381 2765 2664 230 290 69 49 chr5 152835435 152835680 -50249852 + L1MC4 LINE L1 7480 7729 -313 1833 134 7 0 chr5 152835698 152835981 -50249551 - MER47A DNA MER2_type -74 292 8 1151 105 26 101 chr5 152835985 152836213 -50249319 - MER67D LTR ERV1 -303 211 1 5646 108 14 31 chr5 152836450 152836711 -50248821 - L1PA11 LINE L1 0 6174 5910 2061 148 94 38 chr5 152836711 152837137 -50248395 + LTR7 LTR ERV1 1 450 0 5646 108 14 31 chr5 152837137 152837160 -50248372 - L1PA11 LINE L1 -264 5910 5888 2155 121 3 3 chr5 152837160 152837467 -50248065 - AluSc SINE Alu -2 307 1 5646 108 14 31 chr5 152837467 152838077 -50247455 - L1PA11 LINE L1 -286 5888 5294 21 57 0 0 chr5 152838320 152838355 -50247177 + AT_rich Low_complexity Low_complexity 1 35 0 384 299 164 28 chr5 152838360 152838574 -50246958 + MIR SINE MIR 1 243 -19 2062 209 126 44 chr5 152838709 152839322 -50246210 + MLT2F LTR ERVL 1 663 0 275 267 13 13 chr5 152839475 152839550 -50245982 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 357 303 35 21 chr5 152839852 152839994 -50245538 + MIR SINE MIR 2 145 -117 791 268 57 47 chr5 152840191 152840598 -50244934 + LTR16A LTR ERVL 16 426 -24 511 219 46 26 chr5 152840609 152840760 -50244772 + L1MA10 LINE L1 6178 6331 -3 1844 154 236 60 chr5 152840851 152841304 -50244228 + LTR10A LTR ERV1 1 558 -51 2068 79 46 0 chr5 152841304 152841584 -50243948 - AluY SINE Alu -18 293 1 1844 154 236 60 chr5 152841584 152841648 -50243884 + LTR10A LTR ERV1 558 609 0 331 354 26 0 chr5 152841763 152841876 -50243656 - L2 LINE L2 -14 3258 3143 2124 138 0 0 chr5 152842680 152842978 -50242554 + AluSx SINE Alu 1 298 -14 399 324 73 27 chr5 152843347 152843566 -50241966 - MIR SINE MIR -16 246 18 787 269 126 25 chr5 152843659 152844143 -50241389 - L1MEd LINE L1 -3301 2828 2296 464 290 127 8 chr5 152844353 152844739 -50240793 + L1ME LINE L1 4729 5160 -986 454 252 56 12 chr5 152844824 152845006 -50240526 + L1ME LINE L1 5258 5462 -708 523 271 73 31 chr5 152845047 152845239 -50240293 + L1ME LINE L1 5612 5811 -351 321 248 48 56 chr5 152845363 152845488 -50240044 - L1MEd LINE L1 -5949 170 47 226 146 18 18 chr5 152846018 152846073 -50239459 + T-rich Low_complexity Low_complexity 2 56 0 4136 250 61 39 chr5 152846252 152847901 -50237631 + L1ME1 LINE L1 2341 4025 -2121 1170 120 16 22 chr5 152847904 152848088 -50237444 + AluSg/x SINE Alu 130 312 0 994 219 36 0 chr5 152848089 152848308 -50237224 + L1ME1 LINE L1 4015 4241 -1905 3100 216 63 28 chr5 152848326 152849727 -50235805 + L1ME1 LINE L1 4729 6162 -4 306 324 77 22 chr5 152849839 152850021 -50235511 - MIR SINE MIR -58 204 13 189 211 0 0 chr5 152850084 152850136 -50235396 + GA-rich Low_complexity Low_complexity 1 52 0 745 235 126 13 chr5 152850420 152850650 -50234882 - MIR SINE MIR 0 262 7 32 43 0 0 chr5 152851154 152851200 -50234332 + AT_rich Low_complexity Low_complexity 1 46 0 252 298 39 10 chr5 152852790 152852893 -50232639 - MIR SINE MIR 0 262 157 218 293 131 30 chr5 152852893 152852992 -50232540 - MER91A DNA MER1_type -1 195 87 337 331 8 16 chr5 152853043 152853167 -50232365 - MIR SINE MIR -9 253 131 443 247 55 111 chr5 152854429 152854664 -50230868 - MIR SINE MIR -20 242 21 1078 254 95 70 chr5 152855024 152855521 -50230011 + MLT1H LTR MaLR 41 549 0 21 0 0 0 chr5 152856331 152856352 -50229180 + AT_rich Low_complexity Low_complexity 1 21 0 220 336 86 26 chr5 152856720 152856836 -50228696 + L3 LINE CR1 1223 1345 -232 761 276 57 0 chr5 152857029 152857257 -50228275 + MIR SINE MIR 20 260 -2 194 267 0 0 chr5 152857359 152857404 -50228128 - MIR SINE MIR -56 206 162 382 192 27 0 chr5 152858182 152858255 -50227277 + MIR SINE MIR 178 252 -10 2606 230 65 41 chr5 152858444 152859147 -50226385 + MER72 LTR ERV1 3 722 0 40 0 0 0 chr5 152859604 152859644 -50225888 + AT_rich Low_complexity Low_complexity 1 40 0 2884 112 77 57 chr5 152860391 152860982 -50224550 - MER4B LTR ERV1 -7 772 1 455 351 50 27 chr5 152861190 152861412 -50224120 + MIR SINE MIR 2 228 -34 992 193 57 31 chr5 152861425 152861653 -50223879 - MIR SINE MIR -5 257 24 259 400 43 0 chr5 152862701 152862816 -50222716 + L2 LINE L2 3125 3244 -28 426 257 86 0 chr5 152862834 152862939 -50222593 - MER81 DNA DNA 0 114 1 4297 11 0 20 chr5 152864004 152864266 -50221266 - L1P1 LINE L1 -413 5742 5495 2853 13 0 0 chr5 152864266 152864576 -50220956 - AluYa5 SINE Alu -1 310 1 4297 11 0 20 chr5 152864576 152864854 -50220678 - L1P1 LINE L1 -660 5495 5213 4059 5 0 0 chr5 152864849 152865294 -50220238 + L1HS LINE L1 5710 6154 -1 * 183 42 0 0 chr5 152865294 152865318 -50220214 + (TAAAAA)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 152865596 152865619 -50219913 + AT_rich Low_complexity Low_complexity 1 23 0 858 103 0 0 chr5 152865683 152865833 -50219699 - AluSg/x SINE Alu 0 344 195 196 186 47 0 chr5 152865866 152865909 -50219623 + L2 LINE L2 3014 3058 -214 201 369 42 46 chr5 152866642 152866859 -50218673 - MIR SINE MIR -44 218 3 207 0 0 0 chr5 152867349 152867372 -50218160 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 661 177 95 6 chr5 152867543 152867701 -50217831 - Charlie4 DNA MER1_type -16 1945 1774 556 127 0 0 chr5 152867701 152867780 -50217752 + LTR5 LTR ERVK 1 79 -890 5234 50 3 0 chr5 152867808 152868447 -50217085 - HERVK LTR ERVK -1710 5533 4893 675 238 12 0 chr5 152868489 152868657 -50216875 - Charlie4 DNA MER1_type -1768 193 24 405 286 43 19 chr5 152868935 152869096 -50216436 + LTR33A LTR ERVL 345 509 -14 239 323 218 0 chr5 152869119 152869252 -50216280 + MIR SINE MIR 57 218 -44 800 222 58 0 chr5 152870308 152870479 -50215053 - MIR SINE MIR -3 259 79 960 206 90 6 chr5 152872206 152872449 -50213083 - MLT1F1 LTR MaLR -23 570 308 504 202 20 10 chr5 152872433 152872532 -50213000 - MLT1F1 LTR MaLR -462 105 6 * 1738 189 0 10 chr5 152872783 152873096 -50212436 + AluJb SINE Alu 3 312 0 280 354 54 0 chr5 152873374 152873521 -50212011 + MIR SINE MIR 101 255 -7 230 309 12 12 chr5 152873641 152873725 -50211807 + MIR3 SINE MIR 91 174 -34 249 295 26 6 chr5 152873869 152874025 -50211507 + (TG)n Simple_repeat Simple_repeat 2 160 0 1849 151 7 16 chr5 152877093 152877398 -50208134 - AluJb SINE Alu -10 302 1 28 0 0 0 chr5 152878108 152878136 -50207396 + AT_rich Low_complexity Low_complexity 1 28 0 190 289 84 0 chr5 152878608 152878691 -50206841 + MIR3 SINE MIR 117 206 -2 251 308 115 26 chr5 152880044 152880200 -50205332 + MIR3 SINE MIR 33 202 -6 541 262 24 30 chr5 152880466 152880634 -50204898 - MIR SINE MIR -95 167 1 208 53 53 0 chr5 152880750 152880788 -50204744 + A-rich Low_complexity Low_complexity 2 41 0 502 217 25 25 chr5 152881082 152881202 -50204330 - L1MD2 LINE L1 0 6359 6240 1130 190 14 14 chr5 152881733 152881949 -50203583 - MIR SINE MIR -34 228 13 327 146 0 0 chr5 152881980 152882035 -50203497 + (TCCCC)n Simple_repeat Simple_repeat 5 59 0 323 299 43 43 chr5 152882155 152882319 -50203213 + L2 LINE L2 1733 1896 -1418 286 381 0 0 chr5 152883322 152883490 -50202042 + (TGG)n Simple_repeat Simple_repeat 1 168 0 370 277 11 0 chr5 152884757 152884851 -50200681 - MIR SINE MIR -87 175 81 195 333 28 0 chr5 152886234 152886306 -50199226 + L2 LINE L2 3240 3313 0 183 292 77 77 chr5 152886444 152886639 -50198893 - L2 LINE L2 -163 3109 2915 208 270 32 0 chr5 152886984 152887047 -50198485 + L2 LINE L2 3247 3311 -2 210 346 45 40 chr5 152887937 152888139 -50197393 + L2 LINE L2 2553 2755 -559 997 249 59 20 chr5 152888678 152889032 -50196500 - L1ME2 LINE L1 -13 6151 5784 3969 117 18 31 chr5 152889032 152889708 -50195824 - Tigger4(Zombi) DNA MER2_type 0 2731 2065 776 186 30 24 chr5 152889708 152889875 -50195657 - Tigger4(Zombi) DNA MER2_type -2542 189 22 1723 252 21 11 chr5 152889881 152890182 -50195350 - L1ME2 LINE L1 -379 5785 5488 842 230 0 0 chr5 152890182 152890343 -50195189 - FRAM SINE Alu -5 161 1 1723 252 21 11 chr5 152890343 152891167 -50194365 - L1ME2 LINE L1 -676 5488 4383 843 115 104 11 chr5 152891176 152891359 -50194173 - L1MC2 LINE L1 -1 6343 6144 8408 182 68 65 chr5 152891360 152891763 -50193769 - L1MC3 LINE L1 -185 7600 7200 285 223 64 32 chr5 152891763 152891857 -50193675 - MLT1F1 LTR MaLR -435 132 36 8408 182 68 65 chr5 152891857 152893510 -50192022 - L1MC3 LINE L1 -585 7200 5553 1107 128 55 17 chr5 152893510 152893745 -50191787 - L1MA9 LINE L1 -5 6307 6064 8408 182 68 65 chr5 152893745 152894130 -50191402 - L1MC3 LINE L1 -2232 5553 5171 864 214 7 0 chr5 152894130 152894284 -50191248 - FRAM SINE Alu -11 155 1 8408 182 68 65 chr5 152894284 152894695 -50190837 - L1MC3 LINE L1 -2614 5171 4747 4318 206 59 30 chr5 152894684 152896086 -50189446 - L1M4 LINE L1 -736 5936 4486 * 1424 241 66 86 chr5 152896091 152897836 -50187696 - L1MEc LINE L1 -3325 3319 1679 6393 117 152 94 chr5 152897852 152899456 -50186076 + pTR5 LTR ERV1 742 2438 0 10262 201 165 14 chr5 152899564 152905030 -50180502 + L1PB1 LINE L1 6 6619 -248 2239 85 0 33 chr5 152905030 152905335 -50180197 - AluSx SINE Alu -17 295 1 10262 201 165 14 chr5 152905335 152905629 -50179903 + L1PB1 LINE L1 6619 6867 0 590 259 31 26 chr5 152905751 152905944 -50179588 + MIR SINE MIR 4 197 -65 434 224 129 75 chr5 152905948 152906095 -50179437 + MER5A DNA MER1_type 32 186 -3 298 220 44 55 chr5 152906095 152906173 -50179359 + MIR SINE MIR 186 262 0 223 257 0 57 chr5 152906290 152906360 -50179172 + L2 LINE L2 3214 3279 -34 1836 244 55 24 chr5 152906595 152907230 -50178302 + L1ME3A LINE L1 5293 5947 -223 389 228 59 103 chr5 152907259 152907579 -50177953 - L1MEc LINE L1 -5086 1548 1147 521 337 48 0 chr5 152908194 152908443 -50177089 - L1MEc LINE L1 -6080 745 485 284 267 59 59 chr5 152908767 152908868 -50176664 + L2 LINE L2 3132 3232 -40 228 218 0 36 chr5 152908904 152908959 -50176573 - MIR SINE MIR -7 255 203 684 224 14 96 chr5 152908961 152909180 -50176352 - MIR SINE MIR -2 260 60 27 0 0 0 chr5 152910681 152910708 -50174824 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 152910722 152910743 -50174789 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 152910891 152910914 -50174618 + AT_rich Low_complexity Low_complexity 1 23 0 240 346 105 0 chr5 152911027 152911160 -50174372 + MIR3 SINE MIR 2 148 -60 319 308 67 0 chr5 152911174 152911278 -50174254 - MIR SINE MIR -66 196 86 400 289 25 8 chr5 152912089 152912210 -50173322 - L2 LINE L2 0 3313 3191 405 298 149 10 chr5 152912225 152912433 -50173099 + MIR SINE MIR 13 249 -13 1317 213 23 67 chr5 152912625 152913015 -50172517 + MLT1A2 LTR MaLR 2 374 0 424 261 50 38 chr5 152913778 152914016 -50171516 - L1ME4a LINE L1 -264 5857 5617 211 373 59 8 chr5 152914046 152914164 -50171368 - L2 LINE L2 -4 3268 3145 193 282 26 39 chr5 152915670 152915748 -50169784 - MER5A DNA MER1_type -35 154 78 2300 67 3 3 chr5 152916792 152917091 -50168441 - AluY SINE Alu -12 299 1 181 250 77 0 chr5 152917881 152917933 -50167599 - L2 LINE L2 0 3313 3258 14474 205 39 25 chr5 153018793 153019596 -50065936 + L1MA6 LINE L1 2009 2799 -4920 180 0 0 0 chr5 153019596 153019616 -50065916 + (CA)n Simple_repeat Simple_repeat 1 20 0 14474 205 39 25 chr5 153019616 153021183 -50064349 + L1MA6 LINE L1 2799 4342 -3377 2054 131 3 0 chr5 153021183 153021480 -50064052 + AluSp SINE Alu 7 304 -9 14474 205 39 25 chr5 153021480 153022573 -50062959 + L1MA6 LINE L1 4342 5418 -2301 3522 32 0 5 chr5 153022573 153023004 -50062528 + L1PA4 LINE L1 5724 6152 -3 14474 205 39 25 chr5 153023004 153023184 -50062348 + L1MA6 LINE L1 5418 5594 -2125 1905 145 33 3 chr5 153023184 153023488 -50062044 + AluSq SINE Alu 1 313 0 14474 205 39 25 chr5 153023488 153025399 -50060133 + L1MA6 LINE L1 5594 7654 -65 22 35 0 0 chr5 153025416 153025445 -50060087 + AT_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr5 153025759 153025783 -50059749 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 203 202 11 138 chr5 153025790 153025884 -50059648 - L2 LINE L2 0 3313 3232 273 330 52 35 chr5 153027402 153027517 -50058015 - L2 LINE L2 -38 3275 3159 189 196 0 0 chr5 153027524 153027570 -50057962 + GA-rich Low_complexity Low_complexity 2 47 0 5968 107 21 13 chr5 153028209 153029188 -50056344 - L1PA15 LINE L1 0 6165 5166 209 359 51 55 chr5 153029548 153029804 -50055728 - MIR SINE MIR 0 262 8 630 169 62 0 chr5 153030508 153030638 -50054894 - L1PA15 LINE L1 -7 6158 6021 257 323 228 17 chr5 153030983 153031342 -50054190 + L2 LINE L2 341 775 -2539 727 315 170 47 chr5 153031403 153032560 -50052972 + L2 LINE L2 1310 2609 -705 649 297 76 36 chr5 153032696 153032999 -50052533 - L2 LINE L2 0 3313 2999 263 161 0 32 chr5 153033117 153033179 -50052353 + CT-rich Low_complexity Low_complexity 5 64 0 31 92 0 0 chr5 153033548 153033635 -50051897 + AT_rich Low_complexity Low_complexity 1 87 0 342 303 0 22 chr5 153034690 153034779 -50050753 + L2 LINE L2 3137 3223 -49 295 297 64 117 chr5 153035265 153035642 -50049890 + L2 LINE L2 2916 3272 0 2166 122 0 0 chr5 153035698 153035984 -50049548 - AluSx SINE Alu -26 286 1 455 324 94 37 chr5 153036918 153037162 -50048370 - MIR SINE MIR -3 259 2 23 78 0 0 chr5 153037610 153037661 -50047871 + AT_rich Low_complexity Low_complexity 1 51 0 2616 99 13 13 chr5 153038105 153038480 -50047052 - THE1C LTR MaLR 0 375 1 2022 202 52 62 chr5 153038540 153039056 -50046476 + MLT2B3 LTR ERVL 1 512 -42 315 0 0 0 chr5 153039056 153039091 -50046441 + (TG)n Simple_repeat Simple_repeat 1 35 0 2022 202 52 62 chr5 153039091 153039134 -50046398 + MLT2B3 LTR ERVL 512 554 0 344 293 249 24 chr5 153039306 153039511 -50046021 - MIR SINE MIR -4 258 8 357 317 54 30 chr5 153039514 153039681 -50045851 - L2 LINE L2 -7 3306 3136 240 186 206 20 chr5 153039749 153039851 -50045681 + L1ME4a LINE L1 5966 6086 -35 228 205 27 32 chr5 153040100 153040215 -50045317 - MER5B DNA MER1_type -4 174 8 211 256 61 49 chr5 153040951 153041033 -50044499 + MIR SINE MIR 1 83 -179 269 250 0 0 chr5 153041117 153041169 -50044363 + MER5A DNA MER1_type 137 188 -1 429 304 32 0 chr5 153041171 153041296 -50044236 + MIR SINE MIR 105 233 -29 449 204 49 43 chr5 153042726 153042760 -50042772 - L1MA10 LINE L1 -2 6332 6299 2832 221 34 29 chr5 153042760 153044058 -50041474 - L1ME1 LINE L1 -23 6143 4839 555 279 15 50 chr5 153044193 153044394 -50041138 - MIR SINE MIR 0 262 69 440 138 41 57 chr5 153045237 153045360 -50040172 + MER53 DNA DNA 67 187 -2 1052 227 37 5 chr5 153045406 153045622 -50039910 - MER58A DNA MER1_type 0 224 2 811 198 71 39 chr5 153045631 153045813 -50039719 + MER5A DNA MER1_type 1 188 -1 309 288 51 90 chr5 153045825 153046002 -50039530 + MER5B DNA MER1_type 4 173 -5 442 278 42 80 chr5 153047504 153047716 -50037816 - MIR SINE MIR -45 217 14 2141 109 10 26 chr5 153047757 153048059 -50037473 - AluSx SINE Alu -15 297 1 392 296 228 10 chr5 153048345 153048551 -50036981 + MIR SINE MIR 6 256 -6 354 328 40 8 chr5 153049491 153049616 -50035916 - MIR SINE MIR -86 176 48 399 105 0 0 chr5 153050606 153050663 -50034869 + L1PA16 LINE L1 6088 6144 -22 224 220 68 0 chr5 153051172 153051231 -50034301 - MIR3 SINE MIR -3 205 143 302 323 106 11 chr5 153051285 153051474 -50034058 + MIR SINE MIR 56 262 0 229 351 43 0 chr5 153051500 153051594 -50033938 - MIR SINE MIR -80 128 31 216 349 24 0 chr5 153051678 153051761 -50033771 + MIR SINE MIR 63 147 -115 206 250 0 0 chr5 153052287 153052327 -50033205 - L2 LINE L2 -16 3297 3258 351 324 178 5 chr5 153052459 153052644 -50032888 - MIR SINE MIR -31 231 15 462 283 157 16 chr5 153052894 153053085 -50032447 + MIR SINE MIR 31 248 -14 713 245 7 0 chr5 153053233 153053376 -50032156 + MIR SINE MIR 18 161 -101 301 173 0 0 chr5 153053381 153053433 -50032099 - MIR SINE MIR -10 252 201 365 289 16 25 chr5 153053474 153053595 -50031937 - L2 LINE L2 -12 3260 3141 435 212 33 60 chr5 153053733 153053884 -50031648 - MER103 DNA DNA -16 150 4 420 237 97 18 chr5 153054659 153054773 -50030759 + MIR SINE MIR 26 148 -114 2147 80 7 4 chr5 153054864 153055140 -50030392 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr5 153055142 153055162 -50030370 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 181 335 104 37 chr5 153055587 153055696 -50029836 - MIR3 SINE MIR -12 196 71 2576 150 21 0 chr5 153055696 153056115 -50029417 + MSTA LTR MaLR 1 428 0 181 335 104 37 chr5 153056115 153056169 -50029363 - MIR3 SINE MIR -137 71 22 239 251 65 96 chr5 153056307 153056506 -50029026 + MLT1J LTR MaLR 240 432 -79 249 206 320 10 chr5 153056751 153056848 -50028684 - MIR SINE MIR -115 147 21 189 204 341 0 chr5 153056867 153056955 -50028577 + MIR SINE MIR 144 261 -1 340 328 25 25 chr5 153057297 153057419 -50028113 + MIR SINE MIR 30 151 -57 459 119 0 12 chr5 153057419 153057503 -50028029 + L1MA5 LINE L1 6216 6298 -2 238 304 281 0 chr5 153058423 153058558 -50026974 + L3 LINE CR1 1308 1480 -97 1536 196 85 36 chr5 153058685 153059155 -50026377 - L1MD3 LINE L1 -166 7829 7337 1858 253 134 42 chr5 153059163 153059538 -50025994 - L1M4 LINE L1 -1761 4385 4046 2358 126 5 27 chr5 153059538 153059910 -50025622 - THE1B LTR MaLR 0 364 1 1858 253 134 42 chr5 153059910 153060736 -50024796 - L1M4 LINE L1 -2100 4046 3074 2516 80 3 29 chr5 153060755 153061123 -50024409 - L1PB1 LINE L1 0 6151 5792 378 0 0 0 chr5 153061123 153061165 -50024367 + (TG)n Simple_repeat Simple_repeat 2 43 0 3852 168 11 7 chr5 153061221 153062520 -50023012 - L1PB1 LINE L1 -360 5791 4488 500 259 28 14 chr5 153062523 153062739 -50022793 - L1M4 LINE L1 -3090 3056 2838 1612 206 138 52 chr5 153063213 153063791 -50021741 - LTR27 LTR ERV1 -7 629 2 21 0 0 0 chr5 153064787 153064808 -50020724 + AT_rich Low_complexity Low_complexity 1 21 0 280 57 0 0 chr5 153064854 153064889 -50020643 - U2 snRNA snRNA -153 35 1 530 283 128 33 chr5 153064908 153065139 -50020393 + L1ME4a LINE L1 5734 5942 -179 2312 63 3 0 chr5 153065139 153065424 -50020108 + AluY SINE Alu 1 286 -25 249 33 0 0 chr5 153065424 153065454 -50020078 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 283 128 33 chr5 153065454 153065557 -50019975 + L1ME4a LINE L1 5941 6101 -20 295 273 33 44 chr5 153066680 153066856 -50018676 - MLT1I LTR MaLR -3 428 279 400 289 137 9 chr5 153067506 153067717 -50017815 - L2 LINE L2 -68 3245 3008 261 83 0 0 chr5 153068462 153068498 -50017034 + (TTA)n Simple_repeat Simple_repeat 3 38 0 691 282 25 5 chr5 153068509 153068711 -50016821 - MIR SINE MIR -50 212 7 809 92 52 78 chr5 153068886 153069039 -50016493 + L1PA8 LINE L1 6024 6172 0 727 282 101 58 chr5 153069539 153070096 -50015436 + MLT2E LTR ERVL 25 605 -23 218 271 17 0 chr5 153070168 153070227 -50015305 - MIR SINE MIR -12 250 191 271 248 263 15 chr5 153071737 153071874 -50013658 - MIR SINE MIR -2 260 90 998 89 0 0 chr5 153073484 153073619 -50011913 - L1PA8 LINE L1 -11 6161 6027 369 355 41 5 chr5 153073835 153074032 -50011500 + MIR SINE MIR 34 237 -25 186 133 0 0 chr5 153074388 153074418 -50011114 + (CA)n Simple_repeat Simple_repeat 1 30 0 451 326 53 22 chr5 153074563 153074885 -50010647 - L1ME LINE L1 -382 5739 5408 208 121 0 0 chr5 153075634 153075667 -50009865 + (TG)n Simple_repeat Simple_repeat 1 33 0 423 288 50 50 chr5 153076117 153076339 -50009193 + MIR SINE MIR 41 262 0 300 178 82 59 chr5 153076878 153077013 -50008519 - L1ME4a LINE L1 -6 6115 5978 228 271 132 38 chr5 153077072 153077338 -50008194 - L1ME4a LINE L1 -243 5878 5588 570 330 38 36 chr5 153077342 153077674 -50007858 + MLT1L LTR MaLR 128 463 -152 707 48 87 10 chr5 153077674 153077777 -50007755 + L1PA8 LINE L1 6049 6159 -13 570 330 38 36 chr5 153077777 153077920 -50007612 + MLT1L LTR MaLR 463 604 -11 327 261 92 28 chr5 153077936 153078078 -50007454 - L1ME4a LINE L1 -2359 5449 5299 4351 245 65 25 chr5 153078135 153079418 -50006114 + L1M1 LINE L1 91 1424 -5425 * 10856 157 27 35 chr5 153079408 153080101 -50005431 + L1M1 LINE L1 3661 4358 -2519 186 43 0 0 chr5 153080101 153080124 -50005408 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 10856 157 27 35 chr5 153080124 153080742 -50004790 + L1M1 LINE L1 4358 4979 -1898 2062 134 7 3 chr5 153080742 153081048 -50004484 + AluSx SINE Alu 5 311 -1 10856 157 27 35 chr5 153081048 153082215 -50003317 + L1M1 LINE L1 4979 6134 -743 358 333 94 47 chr5 153082290 153082692 -50002840 - L1ME4a LINE L1 -1314 4832 4412 2001 124 0 4 chr5 153083193 153083466 -50002066 + AluSg SINE Alu 9 280 -30 262 0 53 0 chr5 153083471 153083509 -50002023 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 25 31 0 0 chr5 153083683 153083715 -50001817 + AT_rich Low_complexity Low_complexity 1 32 0 2547 104 35 99 chr5 153083805 153084352 -50001180 - L1MA3 LINE L1 0 6305 5794 441 315 12 22 chr5 153084760 153084920 -50000612 - MIR SINE MIR -36 172 13 739 240 11 0 chr5 153085086 153085261 -50000271 - MER5B DNA MER1_type 0 178 2 255 125 0 0 chr5 153085442 153085482 -50000050 + (CA)n Simple_repeat Simple_repeat 1 40 0 336 287 108 67 chr5 153086115 153086383 -49999149 - L2 LINE L2 -40 3273 2995 1242 223 123 27 chr5 153088367 153088962 -49996570 + L1ME2 LINE L1 5483 6145 -19 2954 141 48 2 chr5 153089205 153089700 -49995832 + LTR53 LTR ERVL 2 519 0 349 252 92 8 chr5 153089994 153090113 -49995419 + MIR3 SINE MIR 66 194 -14 501 170 0 71 chr5 153090880 153090992 -49994540 - MER20 DNA MER1_type 0 219 116 3773 164 40 6 chr5 153091209 153091927 -49993605 - L1MB2 LINE L1 0 6171 5429 1440 158 26 52 chr5 153091931 153092237 -49993295 - L1MA10 LINE L1 -9 6325 6028 2281 163 51 33 chr5 153092237 153092686 -49992846 + MSTB2 LTR MaLR 1 457 0 1440 158 26 52 chr5 153092686 153092727 -49992805 - L1MA10 LINE L1 -306 6028 5987 335 100 43 7 chr5 153092727 153092796 -49992736 - L1P LINE L1 -729 5425 5361 * 417 206 28 19 chr5 153092795 153092902 -49992630 - L1ME LINE L1 -577 5587 5480 1203 205 66 16 chr5 153093065 153093445 -49992087 - L1MB2 LINE L1 -757 5389 4991 41 0 0 0 chr5 153094886 153094927 -49990605 + AT_rich Low_complexity Low_complexity 1 41 0 241 260 78 0 chr5 153094942 153095019 -49990513 + MIR SINE MIR 168 250 -12 233 311 108 27 chr5 153095053 153095234 -49990298 + MIR SINE MIR 3 196 -58 414 260 57 83 chr5 153095297 153095489 -49990043 - MIR SINE MIR -74 188 2 17810 198 21 7 chr5 153096158 153100362 -49985170 + L1PA15-16 LINE L1 1 4314 -2535 2165 117 27 0 chr5 153100362 153100662 -49984870 + AluSx SINE Alu 1 308 -4 17810 198 21 7 chr5 153100662 153102350 -49983182 + L1PA15-16 LINE L1 4314 5976 -873 24 32 0 0 chr5 153102686 153102717 -49982815 + AT_rich Low_complexity Low_complexity 1 31 0 238 185 65 0 chr5 153102804 153102896 -49982636 + (TA)n Simple_repeat Simple_repeat 2 99 0 552 291 81 26 chr5 153102934 153103168 -49982364 - MIR SINE MIR -12 250 4 2469 141 32 9 chr5 153103938 153104372 -49981160 - MER65A LTR ERV1 0 445 2 2470 207 43 8 chr5 153104373 153104983 -49980549 - MER65A-int LTR ERV1 0 4871 4241 1836 229 67 41 chr5 153104988 153105525 -49980007 - MER65A-int LTR ERV1 -740 4131 3581 252 132 132 19 chr5 153105497 153105550 -49979982 - MER65A-int LTR ERV1 -934 5397 5339 * 311 200 13 53 chr5 153105575 153105650 -49979882 - MER65A-int LTR ERV1 -977 3959 3888 * 1861 227 86 33 chr5 153105640 153106387 -49979145 - MER65A-int LTR ERV1 -1114 5279 3103 2087 118 0 0 chr5 153106410 153106690 -49978842 - AluSx SINE Alu -32 280 1 251 217 60 0 chr5 153106790 153106873 -49978659 - MER65A-int LTR ERV1 -1898 3038 2951 * 791 167 50 6 chr5 153106864 153107044 -49978488 + LOR1-int LTR ERV1 1091 1278 -6842 4314 212 59 58 chr5 153107047 153108775 -49976757 - MER65A-int LTR ERV1 -3011 1860 83 2448 128 36 25 chr5 153108858 153109297 -49976235 - MER65A LTR ERV1 -1 444 1 342 323 60 20 chr5 153109720 153109968 -49975564 - MLT1L LTR MaLR 0 615 358 252 0 0 0 chr5 153110471 153110499 -49975033 + (T)n Simple_repeat Simple_repeat 1 28 0 1398 164 102 36 chr5 153110499 153110883 -49974649 - MER69 DNA AcHobo -16 2510 2102 313 269 0 26 chr5 153111391 153111469 -49974063 - MER69 DNA AcHobo -2449 77 2 549 261 132 68 chr5 153112699 153113231 -49972301 - MLT1L LTR MaLR -17 598 33 209 294 22 22 chr5 153113412 153113504 -49972028 + GA-rich Low_complexity Low_complexity 4 95 0 3612 240 76 7 chr5 153113650 153114731 -49970801 - MER69B DNA AcHobo 0 1226 72 1287 201 19 0 chr5 153115244 153115507 -49970025 + L1MA4A LINE L1 3 270 -6579 11818 180 29 12 chr5 153115509 153116481 -49969051 + L1MA4A LINE L1 3190 4144 -2861 1580 132 120 24 chr5 153116481 153116822 -49968710 - THE1C LTR MaLR 0 375 2 11818 180 29 12 chr5 153116822 153119411 -49966121 + L1MA4A LINE L1 4144 6808 -197 535 260 179 15 chr5 153119541 153119737 -49965795 - MIR SINE MIR 0 262 35 339 25 0 0 chr5 153120289 153120300 -49965232 + (TG)n Simple_repeat Simple_repeat 1 51 0 339 25 0 0 chr5 153120300 153120340 -49965192 + (TG)n Simple_repeat Simple_repeat 1 40 0 249 33 0 0 chr5 153120369 153120399 -49965133 + (CA)n Simple_repeat Simple_repeat 1 30 0 183 404 11 11 chr5 153121147 153121241 -49964291 + MIR SINE MIR 21 114 -94 2641 55 3 0 chr5 153121593 153121902 -49963630 + AluY SINE Alu 1 310 -1 3873 193 71 9 chr5 153121965 153122924 -49962608 + L1MC3 LINE L1 5315 6332 -1453 1593 187 49 6 chr5 153122924 153123250 -49962282 - MER2 DNA MER2_type -5 340 1 2744 157 36 0 chr5 153123253 153123756 -49961776 + L1MC3 LINE L1 6329 6849 -936 380 82 16 0 chr5 153123763 153123824 -49961708 + (GA)n Simple_repeat Simple_repeat 1 62 0 477 132 0 0 chr5 153123878 153123954 -49961578 + L1MC3 LINE L1 7056 7131 -654 391 92 31 0 chr5 153123952 153124017 -49961515 - L1M4 LINE L1 -870 5276 5210 * 662 219 7 13 chr5 153124032 153124187 -49961345 + L1MC1 LINE L1 5905 6058 -275 1245 226 67 69 chr5 153124187 153124637 -49960895 + MLT2B1 LTR ERVL 1 450 -70 307 0 47 0 chr5 153124637 153124680 -49960852 + (TC)n Simple_repeat Simple_repeat 2 46 0 186 43 0 0 chr5 153124679 153124702 -49960830 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 1245 226 67 69 chr5 153124680 153124746 -49960786 + MLT2B1 LTR ERVL 450 494 -26 960 191 82 19 chr5 153124746 153125002 -49960530 + L1MC2 LINE L1 6065 6336 -8 2677 114 76 7 chr5 153125401 153125850 -49959682 - L1PA13 LINE L1 0 6163 5684 201 121 0 0 chr5 153126269 153126302 -49959230 + (CAT)n Simple_repeat Simple_repeat 1 33 0 267 161 32 32 chr5 153127249 153127311 -49958221 + MIR3 SINE MIR 96 157 -51 218 279 27 82 chr5 153127395 153127542 -49957990 - MER5A DNA MER1_type -50 139 1 22 0 0 0 chr5 153127585 153127607 -49957925 + AT_rich Low_complexity Low_complexity 1 22 0 345 281 58 14 chr5 153128491 153128630 -49956902 - MIR3 SINE MIR -41 167 23 276 258 16 0 chr5 153128785 153128847 -49956685 + CT-rich Low_complexity Low_complexity 2 64 0 373 255 35 108 chr5 153128976 153129262 -49956270 - L2 LINE L2 -194 3078 2814 2284 50 0 11 chr5 153130275 153130553 -49954979 + AluY SINE Alu 21 295 -16 305 234 45 36 chr5 153131309 153131420 -49954112 - MIR SINE MIR -52 210 99 1127 246 126 52 chr5 153131429 153132042 -49953490 + MLT1E3 LTR MaLR 1 624 0 246 284 87 24 chr5 153132169 153132296 -49953236 - L2 LINE L2 -7 3306 3172 252 340 50 0 chr5 153132775 153132875 -49952657 - L2 LINE L2 0 3313 3209 1379 201 36 25 chr5 153133425 153133795 -49951737 - MLT1A2 LTR MaLR 0 626 1 318 253 0 0 chr5 153133795 153133894 -49951638 + L1MA10 LINE L1 6236 6334 0 2278 110 3 3 chr5 153134441 153134749 -49950783 - AluY SINE Alu -3 308 1 286 305 114 38 chr5 153135027 153135158 -49950374 - L2 LINE L2 0 3272 3132 3775 133 82 7 chr5 153135275 153135882 -49949650 + MER39B LTR ERV1 1 653 0 237 277 15 0 chr5 153136002 153136067 -49949465 - MIR SINE MIR -113 149 84 283 276 0 0 chr5 153136086 153136144 -49949388 - L2 LINE L2 -26 3287 3230 2251 123 0 3 chr5 153136514 153136823 -49948709 - AluSc SINE Alu -1 308 1 458 280 21 28 chr5 153137692 153137835 -49947697 - MER117 DNA MER1_type -43 154 13 859 203 7 0 chr5 153138535 153138683 -49946849 - FRAM SINE Alu -31 145 1 1144 119 243 0 chr5 153138787 153138972 -49946560 + MER30 DNA MER1_type 1 230 0 2107 125 0 3 chr5 153140924 153141220 -49944312 + AluSx SINE Alu 1 295 -17 249 381 88 0 chr5 153142139 153142286 -49943246 - L2 LINE L2 -19 3253 3094 2372 79 7 3 chr5 153143671 153143976 -49941556 + AluY SINE Alu 1 306 -5 1961 72 4 8 chr5 153144642 153144904 -49940628 - AluY SINE Alu -9 302 42 576 245 208 25 chr5 153145014 153145176 -49940356 + MLT1J1 LTR MaLR 18 149 -297 2391 61 40 0 chr5 153145176 153145473 -49940059 + AluY SINE Alu 1 309 -2 576 245 208 25 chr5 153145473 153145555 -49939977 + MLT1J1 LTR MaLR 149 307 -139 202 0 29 57 chr5 153145630 153145665 -49939867 + (TTTTTG)n Simple_repeat Simple_repeat 6 39 0 267 244 24 0 chr5 153145820 153145902 -49939630 + (TAAA)n Simple_repeat Simple_repeat 3 86 0 1400 216 143 10 chr5 153146251 153146664 -49938868 - LTR37B LTR ERV1 0 468 1 5883 54 33 0 chr5 153146730 153147429 -49938103 + LTR30 LTR ERV1 1 722 0 3333 98 22 0 chr5 153147791 153148252 -49937280 + L1P4 LINE L1 5285 5755 -406 2067 114 44 8 chr5 153148285 153148675 -49936857 + LTR7 LTR ERV1 1 448 -2 4519 179 40 36 chr5 153148677 153150316 -49935216 + HERVH LTR ERV1 1 1439 -5546 937 93 20 33 chr5 153150334 153150485 -49935047 + HERVH LTR ERV1 7565 7713 0 1931 104 56 9 chr5 153150485 153150867 -49934665 + LTR7 LTR ERV1 1 448 -2 2517 110 0 0 chr5 153150867 153151204 -49934328 + L1PA14 LINE L1 5825 6161 0 207 0 0 0 chr5 153151936 153151959 -49933573 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2031 141 0 0 chr5 153151973 153152257 -49933275 - AluSx SINE Alu -26 286 3 2146 153 137 8 chr5 153153133 153153512 -49932020 + MSTA LTR MaLR 1 428 0 9782 143 16 40 chr5 153153514 153155131 -49930401 + MSTA-int LTR MaLR 3 1580 0 2098 156 130 18 chr5 153155131 153155515 -49930017 + MSTA LTR MaLR 1 427 -1 356 218 109 0 chr5 153156244 153156354 -49929178 - LTR37B LTR ERV1 -11 457 336 5352 158 28 58 chr5 153156357 153157504 -49928028 + L1MA1 LINE L1 3045 4156 -1990 * 7263 116 22 8 chr5 153157503 153158855 -49926677 + L1MA1 LINE L1 4936 6300 -2 1669 243 137 27 chr5 153159005 153159569 -49925963 + MLT1E2 LTR MaLR 1 626 0 943 202 22 41 chr5 153159584 153159667 -49925865 - LTR37B LTR ERV1 -202 266 183 1739 154 125 18 chr5 153159667 153160004 -49925528 + THE1C LTR MaLR 1 373 -2 943 202 22 41 chr5 153160004 153160187 -49925345 - LTR37B LTR ERV1 -285 183 5 366 307 61 0 chr5 153160221 153160335 -49925197 + L2 LINE L2 3192 3312 -1 491 333 32 32 chr5 153160338 153160557 -49924975 + L2 LINE L2 2826 3044 -228 1232 163 0 49 chr5 153160699 153160944 -49924588 - AluJb SINE Alu -11 301 69 487 266 186 11 chr5 153160947 153161135 -49924397 + MIR SINE MIR 10 230 -32 16802 58 12 1 chr5 153162602 153165410 -49920122 - L1PA6 LINE L1 -10 6144 3318 4921 161 23 42 chr5 153166765 153167755 -49917777 - L1MA9 LINE L1 -24 6288 5329 2104 178 80 10 chr5 153167755 153168153 -49917379 - MSTB LTR MaLR 0 426 1 4921 161 23 42 chr5 153168153 153168524 -49917008 - L1MA9 LINE L1 -983 5329 4952 2661 221 65 9 chr5 153168531 153169617 -49915915 + L1M1 LINE L1 3090 4278 -3287 1388 167 19 0 chr5 153169629 153169887 -49915645 - L1MA9 LINE L1 -1680 4466 4204 292 56 0 0 chr5 153169886 153169922 -49915610 - L1M LINE L1 -756 5427 5392 * 8263 186 28 19 chr5 153169923 153171697 -49913835 + L1PA15 LINE L1 4304 6093 -1472 5596 126 35 31 chr5 153171704 153172609 -49912923 + L1PA15 LINE L1 6673 7581 -3 566 298 44 79 chr5 153172626 153172992 -49912540 - MARNA DNA Mariner -175 411 59 342 0 0 0 chr5 153173410 153173448 -49912084 + (CA)n Simple_repeat Simple_repeat 1 38 0 796 219 6 16 chr5 153174101 153174284 -49911248 - MLT1A1 LTR MaLR 0 365 185 218 303 131 66 chr5 153174814 153175012 -49910520 + L2 LINE L2 3044 3254 -18 270 0 0 0 chr5 153175019 153175049 -49910483 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 380 287 79 0 chr5 153175079 153175180 -49910352 - L2 LINE L2 -15 3257 3149 276 281 35 18 chr5 153176570 153176684 -49908848 - MIR SINE MIR -108 154 39 467 276 88 18 chr5 153176978 153177298 -49908234 + LTR16A LTR ERVL 21 391 -59 2076 98 4 0 chr5 153177298 153177593 -49907939 - AluSp SINE Alu 0 312 17 467 276 88 18 chr5 153177593 153177658 -49907874 + LTR16A LTR ERVL 391 450 0 442 253 153 50 chr5 153177972 153178132 -49907400 + L2 LINE L2 2553 2695 -619 1969 164 3 0 chr5 153178132 153178436 -49907096 + AluJb SINE Alu 1 305 -7 442 253 153 50 chr5 153178436 153178536 -49906996 + L2 LINE L2 2695 2840 -474 878 231 231 43 chr5 153178538 153178706 -49906826 - L2 LINE L2 -15 3298 3163 1797 102 3 149 chr5 153178706 153179068 -49906464 + AluSg1 SINE Alu 1 309 0 878 231 231 43 chr5 153179068 153179686 -49905846 - L2 LINE L2 -150 3163 2333 254 252 117 18 chr5 153179708 153179819 -49905713 + L2 LINE L2 2869 2990 -323 271 290 16 0 chr5 153180020 153180082 -49905450 + L2 LINE L2 3202 3264 -8 340 293 112 17 chr5 153182309 153182425 -49903107 - MIR SINE MIR -116 146 20 315 342 50 19 chr5 153182471 153182632 -49902900 - MIR SINE MIR -52 210 45 319 233 33 22 chr5 153183362 153183452 -49902080 - MIR SINE MIR -83 179 89 498 209 0 11 chr5 153183536 153183627 -49901905 - MER5A DNA MER1_type -66 123 34 25 51 0 0 chr5 153184689 153184728 -49900804 + AT_rich Low_complexity Low_complexity 1 39 0 209 32 0 32 chr5 153184861 153184892 -49900640 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 500 207 101 59 chr5 153185209 153185378 -49900154 + MER5B DNA MER1_type 3 178 0 394 278 46 29 chr5 153187060 153187233 -49898299 - MLT1J LTR MaLR -8 503 328 386 188 0 0 chr5 153187455 153187524 -49898008 - MLT1J LTR MaLR -344 167 99 232 188 14 29 chr5 153187709 153187778 -49897754 + L1ME4a LINE L1 5994 6061 -60 3027 207 66 21 chr5 153188258 153189049 -49896483 - MER99 DNA DNA -2 826 1 212 294 219 0 chr5 153189094 153189213 -49896319 + L2 LINE L2 2569 2713 -601 259 248 28 14 chr5 153189222 153189358 -49896174 + L1ME LINE L1 5344 5478 -692 390 295 18 9 chr5 153189363 153189475 -49896057 + L2 LINE L2 3201 3313 0 334 327 30 24 chr5 153190107 153190272 -49895260 + MIR SINE MIR 26 191 -71 204 345 35 18 chr5 153190826 153190939 -49894593 + MIR3 SINE MIR 65 179 -29 723 177 182 22 chr5 153191449 153191630 -49893902 + MER2 DNA MER2_type 1 210 -135 331 354 0 18 chr5 153192364 153192477 -49893055 + L2 LINE L2 3162 3272 0 558 303 50 0 chr5 153192708 153192926 -49892606 + MER112 DNA MER1_type 22 250 -10 226 235 39 144 chr5 153192967 153193055 -49892477 + L2 LINE L2 2915 3011 -261 3118 98 30 0 chr5 153193055 153193495 -49892037 - MLT2A2 LTR ERVL 0 453 1 446 179 112 128 chr5 153193495 153193674 -49891858 - MER5B DNA MER1_type -1 177 2 226 235 39 144 chr5 153193674 153193737 -49891795 + L2 LINE L2 3009 3051 -221 327 150 0 0 chr5 153193747 153193807 -49891725 + (CA)n Simple_repeat Simple_repeat 2 61 0 304 296 139 9 chr5 153193882 153193997 -49891535 + L2 LINE L2 3137 3266 -6 181 200 25 0 chr5 153193997 153194037 -49891495 - MIR SINE MIR -92 170 130 40709 34 21 1 chr5 153194041 153200071 -49885461 - L1PA2 LINE L1 0 6155 1 189 274 65 16 chr5 153200080 153200142 -49885390 + MIR SINE MIR 49 113 -149 228 327 10 10 chr5 153200731 153200832 -49884700 + L1M4b LINE L1 1433 1533 -5326 324 247 65 11 chr5 153200919 153201012 -49884520 + L1M4b LINE L1 1808 1905 -5042 309 326 41 5 chr5 153201019 153201215 -49884317 + L1M4b LINE L1 1976 2178 -4960 3235 123 12 52 chr5 153201260 153201921 -49883611 + L1MA4 LINE L1 5215 5849 -451 1779 245 76 54 chr5 153201921 153202481 -49883051 + L1ME3A LINE L1 5364 5947 -223 2269 107 3 0 chr5 153202481 153202779 -49882753 - AluSg SINE Alu -11 299 1 1779 245 76 54 chr5 153202779 153202998 -49882534 + L1ME3A LINE L1 5947 6160 -10 465 279 2 54 chr5 153203053 153203279 -49882253 + L1MC/D LINE L1 5562 5778 -366 21 36 0 0 chr5 153203295 153203323 -49882209 + AT_rich Low_complexity Low_complexity 1 28 0 1925 149 10 0 chr5 153203372 153203660 -49881872 + AluSx SINE Alu 1 291 -21 24 53 0 0 chr5 153203768 153203806 -49881726 + AT_rich Low_complexity Low_complexity 1 38 0 1690 111 39 0 chr5 153204581 153204860 -49880672 + L1MA8 LINE L1 5996 6285 -6 207 241 0 69 chr5 153205612 153205670 -49879862 + L2 LINE L2 3219 3272 0 324 214 184 10 chr5 153206284 153206382 -49879150 - L2 LINE L2 -3 3269 3155 235 158 26 0 chr5 153206431 153206469 -49879063 - L2 LINE L2 -17 3255 3217 345 289 62 0 chr5 153207021 153207118 -49878414 - MIR SINE MIR -111 151 49 1032 157 26 78 chr5 153207587 153207678 -49877854 - MER20 DNA MER1_type 0 219 125 2260 120 0 0 chr5 153207678 153207979 -49877553 + AluSx SINE Alu 4 304 -8 1032 157 26 78 chr5 153207979 153208117 -49877415 - MER20 DNA MER1_type -94 125 2 4457 152 44 10 chr5 153208695 153209705 -49875827 - L1PA16 LINE L1 -24 6142 5105 3850 197 30 5 chr5 153209708 153210646 -49874886 + L1 LINE L1 3987 4947 -1199 843 126 81 6 chr5 153210668 153210842 -49874690 + L1P5 LINE L1 5264 5450 -706 396 248 8 0 chr5 153210851 153210972 -49874560 + L1P LINE L1 4993 5114 -1032 507 255 114 16 chr5 153211472 153211656 -49873876 - LTR33 LTR ERVL -319 202 1 387 0 0 0 chr5 153212017 153212060 -49873472 + (TC)n Simple_repeat Simple_repeat 2 44 0 492 312 74 45 chr5 153212060 153212241 -49873291 + MLT1I LTR MaLR 52 249 -160 1364 171 38 13 chr5 153212241 153212557 -49872975 - MER33 DNA MER1_type 0 324 1 492 312 74 45 chr5 153212557 153212712 -49872820 + MLT1I LTR MaLR 249 398 -11 317 279 27 0 chr5 153212721 153212832 -49872700 - L1ME LINE L1 -338 5783 5670 310 315 62 37 chr5 153212834 153212996 -49872536 - L1ME LINE L1 -530 5634 5469 380 279 44 60 chr5 153213068 153213383 -49872149 - L1ME4a LINE L1 -263 5858 5549 180 333 42 0 chr5 153213500 153213572 -49871960 - MIR SINE MIR -95 113 39 353 331 66 78 chr5 153214312 153214632 -49870900 + L2 LINE L2 2581 2896 -418 1072 206 45 87 chr5 153214636 153214870 -49870662 + MLT1A1 LTR MaLR 1 214 -151 518 115 0 0 chr5 153214870 153214948 -49870584 + MADE1 DNA Mariner 3 80 0 1072 206 45 87 chr5 153214948 153215092 -49870440 + MLT1A1 LTR MaLR 214 363 -2 334 404 39 39 chr5 153215092 153215272 -49870260 + L2 LINE L2 2892 3071 -201 3242 152 9 55 chr5 153215272 153215312 -49870220 - MLT2B3 LTR ERVL 0 554 514 342 67 0 0 chr5 153215312 153215357 -49870175 + (CA)n Simple_repeat Simple_repeat 2 46 0 3242 152 9 55 chr5 153215357 153215390 -49870142 - MLT2B3 LTR ERVL -40 514 481 1681 173 3 10 chr5 153215390 153215679 -49869853 + AluJb SINE Alu 1 287 -25 423 0 0 0 chr5 153215683 153215730 -49869802 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 3242 152 9 55 chr5 153215730 153216231 -49869301 - MLT2B3 LTR ERVL -76 478 1 334 404 39 39 chr5 153216231 153216411 -49869121 + L2 LINE L2 3070 3252 -20 368 346 111 34 chr5 153218523 153218902 -49866630 + HAL1b LINE L1 259 666 -682 209 316 38 25 chr5 153219346 153219425 -49866107 - L3 LINE CR1 0 1577 1498 395 296 199 25 chr5 153219770 153219966 -49865566 + MIR SINE MIR 31 260 -2 388 337 18 6 chr5 153220890 153221056 -49864476 + MIR SINE MIR 85 252 -10 220 191 0 0 chr5 153221107 153221149 -49864383 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 252 311 0 0 chr5 153221182 153221243 -49864289 - L2 LINE L2 -86 3186 3126 183 347 107 0 chr5 153222257 153222332 -49863200 + L2 LINE L2 3132 3214 -58 346 135 14 0 chr5 153222594 153222668 -49862864 - MER63 DNA MER1_type -173 887 813 * 774 174 26 148 chr5 153222662 153222973 -49862559 + MER63 DNA MER1_type 789 1061 0 5495 161 9 6 chr5 153223176 153224715 -49860817 + L1PB1 LINE L1 4613 6151 0 637 269 97 50 chr5 153224826 153225181 -49860351 - LTR16A LTR ERVL -28 422 51 342 298 35 64 chr5 153225230 153225401 -49860131 - MER5A DNA MER1_type -7 182 17 * 830 200 20 0 chr5 153225253 153225403 -49860129 + MER5A DNA MER1_type 37 189 0 1934 181 85 15 chr5 153225411 153225870 -49859662 - Charlie1b DNA MER1_type 0 523 33 847 311 80 37 chr5 153225955 153226544 -49858988 - L1ME LINE L1 -5437 633 20 1462 172 0 46 chr5 153226690 153226841 -49858691 - L1PA16 LINE L1 0 6166 6034 2402 28 69 0 chr5 153226841 153227131 -49858401 - AluY SINE Alu -1 310 1 1462 172 0 46 chr5 153227131 153227281 -49858251 - L1PA16 LINE L1 -132 6034 5879 742 271 78 12 chr5 153228342 153228600 -49856932 - LTR33 LTR ERVL -197 324 50 430 314 71 12 chr5 153228753 153228922 -49856610 + MIR SINE MIR 72 250 -12 1757 171 14 75 chr5 153229568 153229983 -49855549 - MLT1B LTR MaLR 0 390 1 184 290 304 7 chr5 153230669 153230807 -49854725 - L2 LINE L2 -37 3235 3057 580 318 52 0 chr5 153231566 153231758 -49853774 + MIR SINE MIR 12 213 -49 327 262 19 39 chr5 153231783 153231886 -49853646 - L2 LINE L2 0 3313 3213 846 303 0 5 chr5 153232998 153233216 -49852316 - MIR SINE MIR -26 236 20 2422 122 6 0 chr5 153233485 153233847 -49851685 - L1PB1 LINE L1 -1 6866 6503 259 95 68 0 chr5 153233850 153233924 -49851608 + (TA)n Simple_repeat Simple_repeat 2 80 0 2038 89 0 25 chr5 153233934 153234249 -49851283 - L1PB1 LINE L1 -369 6498 6192 32486 55 4 2 chr5 153234270 153240392 -49845140 - L1PA5 LINE L1 -8 6146 11 7012 198 11 5 chr5 153240404 153242204 -49843328 - L1PB1 LINE L1 -660 6207 4397 * 11915 138 98 9 chr5 153242184 153242868 -49842664 - L1PB1 LINE L1 -2835 4027 3405 2121 139 0 3 chr5 153242868 153243178 -49842354 - AluSg1 SINE Alu 0 309 1 11915 138 98 9 chr5 153243178 153245633 -49839899 - L1PB1 LINE L1 -3457 3405 634 244 219 41 0 chr5 153245633 153245706 -49839826 - L1PB1 LINE L1 -6663 200 125 2059 128 44 33 chr5 153246099 153246459 -49839073 - THE1B LTR MaLR 0 364 1 329 298 70 94 chr5 153246994 153247420 -49838112 + L1MC4a LINE L1 4693 5108 -1038 568 284 52 47 chr5 153247621 153248002 -49837530 + L1MC4a LINE L1 5281 5658 -463 302 293 99 66 chr5 153248016 153248144 -49837388 + L1MC4a LINE L1 5722 5861 -1947 342 73 0 0 chr5 153248144 153248199 -49837333 - L1PA15 LINE L1 0 6165 6111 302 293 99 66 chr5 153248199 153248282 -49837250 + L1MC4a LINE L1 5861 5940 -1868 350 342 26 8 chr5 153248568 153248685 -49836847 + MLT1K LTR MaLR 102 220 -368 190 333 17 0 chr5 153249042 153249102 -49836430 + L2 LINE L2 3191 3251 -62 304 238 67 9 chr5 153249316 153249421 -49836111 + L1ME4a LINE L1 5994 6104 -17 1425 211 75 65 chr5 153249695 153250201 -49835331 + MLT1J LTR MaLR 1 511 0 324 339 37 0 chr5 153250552 153250661 -49834871 + L2 LINE L2 3160 3272 0 23 33 0 0 chr5 153250700 153250730 -49834802 + AT_rich Low_complexity Low_complexity 1 30 0 240 216 0 0 chr5 153251146 153251197 -49834335 - L3 LINE CR1 -3 1574 1524 1745 183 28 0 chr5 153252694 153252857 -49832675 - AluJo SINE Alu -20 292 116 189 0 0 0 chr5 153252857 153252878 -49832654 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1745 183 28 0 chr5 153252878 153252998 -49832534 - AluJo SINE Alu -196 116 1 359 265 54 48 chr5 153253177 153253324 -49832208 - MIR3 SINE MIR -31 177 30 443 343 19 29 chr5 153254308 153254518 -49831014 - MIR SINE MIR -36 226 19 269 293 24 0 chr5 153254631 153254713 -49830819 + CT-rich Low_complexity Low_complexity 3 86 0 373 295 33 49 chr5 153256125 153256180 -49829352 + MIR SINE MIR 16 70 -138 1316 203 118 39 chr5 153256180 153256613 -49828919 + MLT1C LTR MaLR 1 467 0 373 295 33 49 chr5 153256613 153256679 -49828853 + MIR SINE MIR 70 135 -73 443 334 64 46 chr5 153257542 153258011 -49827521 - L2 LINE L2 -50 3222 2734 387 248 248 0 chr5 153258023 153258164 -49827368 + MER5A DNA MER1_type 14 189 0 1627 193 3 25 chr5 153258239 153258592 -49826940 + L1MB1 LINE L1 5824 6168 0 28976 106 8 17 chr5 153258655 153259320 -49826212 - L1PA7 LINE L1 0 6469 5800 2301 107 0 0 chr5 153259320 153259618 -49825914 - AluSc SINE Alu -11 298 1 28976 106 8 17 chr5 153259618 153264844 -49820688 - L1PA7 LINE L1 -669 5800 620 280 219 66 58 chr5 153265123 153265260 -49820272 - MER117 DNA MER1_type -57 140 3 333 361 127 16 chr5 153267333 153267577 -49817955 + L3 LINE CR1 1050 1320 -257 2823 179 67 12 chr5 153267779 153268422 -49817110 - L1MC3 LINE L1 -8 7777 7100 2277 60 0 17 chr5 153268423 153268721 -49816811 + L1PA7 LINE L1 5859 6151 -3 7150 192 76 29 chr5 153269798 153271634 -49813898 - L1MC3 LINE L1 -680 7105 5157 2095 118 7 23 chr5 153271634 153271939 -49813593 - AluSg SINE Alu -10 300 1 7150 192 76 29 chr5 153271939 153272233 -49813299 - L1MC3 LINE L1 -2628 5157 4878 1494 245 68 61 chr5 153272295 153272749 -49812783 - L1MC4a LINE L1 -1311 6497 6048 2653 153 7 5 chr5 153272749 153273180 -49812352 + MSTB1 LTR MaLR 1 432 0 1494 245 68 61 chr5 153273180 153273240 -49812292 - L1MC4a LINE L1 -1760 6048 5990 189 0 0 0 chr5 153273240 153273261 -49812271 + (CA)n Simple_repeat Simple_repeat 2 22 0 1494 245 68 61 chr5 153273261 153273308 -49812224 - L1MC4a LINE L1 -1818 5990 5945 3581 151 34 20 chr5 153273308 153273995 -49811537 - L1MC1 LINE L1 -2 6331 5636 1494 245 68 61 chr5 153273995 153274313 -49811219 - L1MC4a LINE L1 -1863 5945 5610 247 288 0 0 chr5 153274972 153275038 -49810494 - MIR SINE MIR -86 176 111 285 279 47 12 chr5 153275068 153275154 -49810378 + MIR SINE MIR 62 150 -112 626 198 57 90 chr5 153275175 153275352 -49810180 + MER5A DNA MER1_type 14 184 -5 556 294 38 89 chr5 153275365 153275600 -49809932 + MIR SINE MIR 19 241 -21 306 173 173 0 chr5 153275647 153275728 -49809804 + MIR SINE MIR 168 262 0 491 211 149 12 chr5 153276679 153276840 -49808692 + MIR SINE MIR 2 184 -78 306 252 65 37 chr5 153277794 153277901 -49807631 + MIR SINE MIR 34 143 -65 193 176 0 0 chr5 153278325 153278359 -49807173 - L2 LINE L2 -9 3304 3271 2746 148 12 86 chr5 153279305 153279866 -49805666 + MLT2B1 LTR ERVL 1 520 0 242 333 22 0 chr5 153282537 153282627 -49802905 - L2 LINE L2 -188 3084 2993 194 362 31 8 chr5 153282786 153282913 -49802619 - L2 LINE L2 -535 2779 2650 256 330 96 0 chr5 153283953 153284068 -49801464 - MIR SINE MIR -42 220 95 181 329 61 12 chr5 153284400 153284482 -49801050 - L2 LINE L2 -218 3054 2969 440 176 0 0 chr5 153284487 153284555 -49800977 + AluJ/FRAM SINE Alu 215 282 -30 563 118 0 0 chr5 153284555 153284631 -49800901 + AluS SINE Alu 1 76 -233 22 35 0 0 chr5 153286992 153287021 -49798511 + AT_rich Low_complexity Low_complexity 1 29 0 239 229 125 21 chr5 153287151 153287247 -49798285 + L1ME4a LINE L1 5556 5661 -460 1159 202 18 13 chr5 153287247 153287475 -49798057 + MER46A DNA MER2_type 1 229 -7 240 405 0 0 chr5 153287499 153287610 -49797922 - MIR SINE MIR -3 259 149 485 226 87 24 chr5 153287622 153287830 -49797702 + L1ME4a LINE L1 5724 5944 -177 13522 189 24 28 chr5 153287984 153290283 -49795249 + L1PB4 LINE L1 2156 4463 -1909 1842 134 14 24 chr5 153290283 153290575 -49794957 - AluSg SINE Alu -21 289 1 13522 189 24 28 chr5 153290575 153292043 -49793489 + L1PB4 LINE L1 4463 5991 -381 197 65 32 0 chr5 153292043 153292074 -49793458 + (TA)n Simple_repeat Simple_repeat 1 32 0 13522 189 24 28 chr5 153292074 153292454 -49793078 + L1PB4 LINE L1 5991 6371 -1 1337 208 72 37 chr5 153292973 153293377 -49792155 + Charlie4a DNA MER1_type 14 431 -77 765 204 31 0 chr5 153293577 153293738 -49791794 + MER33 DNA MER1_type 1 158 -93 192 337 56 0 chr5 153294323 153294412 -49791120 + L2 LINE L2 3220 3313 0 275 255 104 125 chr5 153294452 153294644 -49790888 + MER5A DNA MER1_type 1 188 -1 186 289 86 55 chr5 153294644 153294768 -49790764 - MIR SINE MIR -68 194 67 3427 209 12 9 chr5 153295006 153295192 -49790340 - MER82 DNA MER2_type -1 652 468 1944 158 16 44 chr5 153295192 153295578 -49789954 + THE1C LTR MaLR 1 375 0 3427 209 12 9 chr5 153295578 153296041 -49789491 - MER82 DNA MER2_type -185 468 1 906 120 0 8 chr5 153296070 153296203 -49789329 + FLAM_C SINE Alu 1 132 -11 204 309 44 0 chr5 153296299 153296367 -49789165 - MIR SINE MIR -107 155 85 196 393 25 18 chr5 153296383 153296546 -49788986 - L2 LINE L2 -759 2555 2392 189 0 0 0 chr5 153296672 153296693 -49788839 + (CCA)n Simple_repeat Simple_repeat 1 21 0 248 387 87 13 chr5 153296723 153297033 -49788499 - L2 LINE L2 -1198 2116 1784 255 316 226 17 chr5 153298174 153298351 -49787181 + MIR SINE MIR 25 238 -24 238 239 28 14 chr5 153298813 153298884 -49786648 - L1MC/D LINE L1 -2014 5794 5723 303 255 11 32 chr5 153299035 153299129 -49786403 + CT-rich Low_complexity Low_complexity 2 93 0 303 293 37 12 chr5 153300790 153300872 -49784660 + L2 LINE L2 3188 3271 -1 297 282 206 23 chr5 153301399 153301530 -49784002 + MIR SINE MIR 51 205 -57 706 323 10 0 chr5 153301659 153301854 -49783678 + MIR SINE MIR 6 202 -60 439 338 81 57 chr5 153301898 153302404 -49783128 - L2 LINE L2 -35 3237 2718 492 259 43 25 chr5 153304265 153304427 -49781105 - MLT1J LTR MaLR 0 511 347 285 229 140 73 chr5 153304512 153304691 -49780841 - L1ME3A LINE L1 -15 6138 5948 587 250 49 4 chr5 153304737 153304917 -49780615 - L1ME3A LINE L1 -196 5949 5769 * 2936 275 49 38 chr5 153304899 153306566 -49778966 - L1ME3A LINE L1 -702 5451 3773 1157 241 22 3 chr5 153306561 153306880 -49778652 + L1MA4 LINE L1 5949 6273 -27 * 1827 118 0 83 chr5 153306882 153307195 -49778337 - AluSx SINE Alu -5 307 21 1260 256 96 68 chr5 153307244 153308226 -49777306 - L1ME3A LINE L1 -2366 3763 2749 1455 199 6 19 chr5 153308226 153308542 -49776990 - AluJo SINE Alu 0 312 1 1260 256 96 68 chr5 153308542 153308589 -49776943 - L1ME3A LINE L1 -3380 2749 2705 761 269 60 44 chr5 153308691 153309280 -49776252 - L1MEd LINE L1 -3611 2518 1956 23 0 0 0 chr5 153309346 153309369 -49776163 + AT_rich Low_complexity Low_complexity 1 23 0 19544 118 7 4 chr5 153309382 153313177 -49772355 - L1PA8A LINE L1 -2 6129 2314 460 262 86 57 chr5 153313314 153313845 -49771687 - L1MEd LINE L1 -4862 1257 860 856 289 80 16 chr5 153314353 153314741 -49770791 - L1ME LINE L1 -1899 4181 3769 1975 232 91 15 chr5 153314759 153315482 -49770050 - L1ME LINE L1 -2528 3552 2775 960 233 60 52 chr5 153315500 153315967 -49769565 - L1ME LINE L1 -4981 1089 663 839 194 0 61 chr5 153315971 153316171 -49769361 - AluJo SINE Alu 0 320 131 676 117 30 10 chr5 153316178 153316382 -49769150 + CT-rich Low_complexity Low_complexity 1 208 0 656 173 0 38 chr5 153316385 153316518 -49769014 - AluJo SINE Alu -174 128 1 1580 267 40 75 chr5 153316522 153317203 -49768329 - L1ME LINE L1 -5410 660 4 212 286 16 0 chr5 153317868 153317931 -49767601 - MIR SINE MIR -126 136 73 2322 111 103 18 chr5 153317986 153318384 -49767148 + MSTB1 LTR MaLR 1 432 0 22 0 0 0 chr5 153319366 153319388 -49766144 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 153319506 153319534 -49765998 + AT_rich Low_complexity Low_complexity 1 28 0 281 292 60 18 chr5 153319732 153319900 -49765632 - L1MC4a LINE L1 -1915 5893 5719 243 256 50 50 chr5 153320568 153320689 -49764843 - HAL1b LINE L1 -6 1342 1222 180 176 0 0 chr5 153320871 153320905 -49764627 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 430 311 136 53 chr5 153320928 153321230 -49764302 - L2 LINE L2 -30 3242 2916 2398 81 3 0 chr5 153322283 153322580 -49762952 + AluSq SINE Alu 2 299 -14 1892 154 0 11 chr5 153323500 153323785 -49761747 + AluSq SINE Alu 1 282 -31 24908 35 3 2 chr5 153323806 153324655 -49760877 - L1PA3 LINE L1 0 6155 5308 2708 39 0 0 chr5 153324655 153324962 -49760570 - AluYa8 SINE Alu -3 307 1 24908 35 3 2 chr5 153324962 153327957 -49757575 - L1PA3 LINE L1 -847 5308 2309 6108 38 0 0 chr5 153327957 153328694 -49756838 + L1PA3 LINE L1 1558 2294 -3852 510 274 75 7 chr5 153329241 153329387 -49756145 + L2 LINE L2 3103 3258 -14 256 306 60 71 chr5 153329483 153329666 -49755866 - MIR3 SINE MIR -25 183 3 23 0 0 0 chr5 153329847 153329870 -49755662 + AT_rich Low_complexity Low_complexity 1 23 0 1603 188 20 27 chr5 153329950 153330242 -49755290 - AluJb SINE Alu -20 292 3 599 224 70 31 chr5 153330276 153330775 -49754757 - L1MC4a LINE L1 -1841 5967 5385 543 238 119 36 chr5 153330923 153331116 -49754416 - MIR SINE MIR -50 212 4 2577 55 0 3 chr5 153331660 153331972 -49753560 + AluY SINE Alu 1 311 0 4398 137 13 7 chr5 153332522 153333217 -49752315 + L1PA16 LINE L1 5468 6166 0 464 198 157 25 chr5 153333486 153333607 -49751925 - MER5B DNA MER1_type -2 176 40 1311 164 15 27 chr5 153333610 153333873 -49751659 + L1MB3 LINE L1 5686 5945 -238 240 349 19 19 chr5 153333964 153334070 -49751462 + MER5A DNA MER1_type 83 188 -1 180 308 77 31 chr5 153334501 153334566 -49750966 + L2 LINE L2 3246 3313 0 * 667 318 101 23 chr5 153334563 153335047 -49750485 + L2 LINE L2 2237 2758 -556 219 191 0 0 chr5 153335588 153335630 -49749902 + L2 LINE L2 3271 3312 -1 303 301 86 32 chr5 153336271 153336364 -49749168 + MIR SINE MIR 10 107 -155 468 189 0 0 chr5 153336464 153336538 -49748994 - MER2 DNA MER2_type -5 340 267 459 306 54 35 chr5 153336738 153336996 -49748536 - L2 LINE L2 -3 3310 3048 370 283 47 38 chr5 153337230 153337442 -49748090 + L1M4 LINE L1 3729 3942 -2204 180 77 0 0 chr5 153337559 153337585 -49747947 + (TG)n Simple_repeat Simple_repeat 1 26 0 1308 192 33 92 chr5 153338139 153338530 -49747002 + MLT1A2 LTR MaLR 1 368 -6 20598 87 12 15 chr5 153339509 153341993 -49743539 - L1PA7 LINE L1 -8 6146 3691 333 0 0 0 chr5 153341993 153342030 -49743502 + (TTG)n Simple_repeat Simple_repeat 3 39 0 20598 87 12 15 chr5 153342030 153343511 -49742021 - L1PA7 LINE L1 -2463 3691 2207 6962 133 10 12 chr5 153343508 153344753 -49740779 + L1PA7 LINE L1 961 2203 -3943 * 2048 208 46 60 chr5 153345124 153345686 -49739846 + MLT2B3 LTR ERVL 1 554 0 203 280 130 40 chr5 153346323 153346423 -49739109 - L2 LINE L2 -31 3241 3133 374 237 43 0 chr5 153347716 153347809 -49737723 + L1MC4 LINE L1 6606 6702 -1340 670 214 70 53 chr5 153347876 153348119 -49737413 + L2 LINE L2 3066 3312 -1 2063 118 28 0 chr5 153348248 153348535 -49736997 + AluSx SINE Alu 1 295 -17 962 178 39 131 chr5 153348554 153348942 -49736590 + L1MC5 LINE L1 6695 7046 -915 455 262 101 58 chr5 153348970 153349098 -49736434 + L1MCc LINE L1 38 159 -6264 2063 253 26 20 chr5 153349098 153349644 -49735888 - MER92C LTR ERV1 -3 551 3 455 262 101 58 chr5 153349644 153349843 -49735689 + L1MCc LINE L1 159 379 -6044 257 220 22 55 chr5 153350082 153350173 -49735359 + L1MCc LINE L1 839 926 -5497 436 274 149 0 chr5 153350376 153350544 -49734988 - L1MEd LINE L1 -3733 2396 2204 1054 247 57 51 chr5 153350575 153351048 -49734484 - MER89-int LTR ERV1 -2718 4083 3608 1189 150 8 38 chr5 153351048 153351288 -49734244 + MER50 LTR ERV1 1 233 -501 * 1531 161 3 68 chr5 153351277 153351600 -49733932 + MER50 LTR ERV1 433 734 0 1691 244 70 55 chr5 153351600 153352333 -49733199 - MER89-int LTR ERV1 -3190 3611 2868 365 217 165 9 chr5 153352398 153352513 -49733019 - MER89-int LTR ERV1 -4019 2782 2650 2589 94 21 11 chr5 153352517 153352899 -49732633 - L1PA7 LINE L1 0 6154 5769 6721 28 1 0 chr5 153352899 153353724 -49731808 - L1PA4 LINE L1 -4 6151 5326 38416 54 4 3 chr5 153353724 153358821 -49726711 - L1PA4 LINE L1 -1044 5102 1 27729 117 18 83 chr5 153358820 153362831 -49722701 - L1PA7 LINE L1 -373 5781 2335 * 6247 30 1 0 chr5 153362831 153363563 -49721969 + L1PA4 LINE L1 5418 6152 -3 27729 117 18 83 chr5 153363563 153365753 -49719779 - L1PA7 LINE L1 -3819 2335 3 707 292 40 12 chr5 153365753 153366100 -49719432 - MER89-int LTR ERV1 -4137 510 158 4164 169 35 26 chr5 153366173 153367048 -49718484 - MER89-int LTR ERV1 -4269 2532 1650 2655 173 35 32 chr5 153367083 153367674 -49717858 - MER89-int LTR ERV1 -5142 1659 1067 786 187 20 35 chr5 153367800 153368003 -49717529 - MER89-int LTR ERV1 -5721 1080 881 594 82 24 0 chr5 153368004 153368089 -49717443 + AluY SINE Alu 218 304 -7 3045 188 54 60 chr5 153368113 153368995 -49716537 - MER89-int LTR ERV1 -5924 877 1 2675 180 27 25 chr5 153368995 153369551 -49715981 - MER89 LTR ERV1 0 559 3 643 306 60 65 chr5 153369629 153370044 -49715488 - L1MEd LINE L1 -4862 1257 845 671 253 14 14 chr5 153370633 153370779 -49714753 - AluJb SINE Alu -30 282 137 296 279 0 0 chr5 153370919 153370980 -49714552 + Charlie1 DNA MER1_type 2 62 -2699 1114 175 68 0 chr5 153370980 153371243 -49714289 + Charlie1 DNA MER1_type 2335 2615 -146 22 80 0 0 chr5 153371268 153371318 -49714214 + AT_rich Low_complexity Low_complexity 1 50 0 428 280 66 85 chr5 153371621 153371928 -49713604 - L1MEd LINE L1 -861 1629 1445 817 262 22 6 chr5 153371928 153372111 -49713421 + MER5A DNA MER1_type 1 186 -3 492 293 59 47 chr5 153372118 153372441 -49713091 - L1MEd LINE L1 -4755 1383 1055 410 243 197 0 chr5 153372477 153372629 -49712903 - L1MEd LINE L1 -5491 628 447 255 233 95 60 chr5 153374908 153375024 -49710508 - MIR3 SINE MIR -12 196 77 627 57 23 0 chr5 153375314 153375402 -49710130 - L1PA7 LINE L1 -3 6151 6062 505 249 144 44 chr5 153375432 153375613 -49709919 + MIR SINE MIR 6 204 -58 2380 91 0 0 chr5 153376183 153376492 -49709040 + AluY SINE Alu 3 311 0 817 201 80 27 chr5 153376740 153377003 -49708529 + L1MB8 LINE L1 5896 6172 -6 190 340 0 0 chr5 153377156 153377206 -49708326 - L2 LINE L2 -2 3270 3221 8879 207 66 45 chr5 153377232 153380457 -49705075 - L1MB3 LINE L1 0 6419 3263 540 167 0 11 chr5 153380457 153380547 -49704985 - 5S rRNA rRNA -30 91 3 8879 207 66 45 chr5 153380547 153381355 -49704177 - L1MB3 LINE L1 -3156 3263 2473 462 18 0 0 chr5 153381355 153381410 -49704122 + (TG)n Simple_repeat Simple_repeat 2 56 0 1779 126 65 0 chr5 153381416 153381677 -49703855 - AluSx SINE Alu -34 278 1 8879 207 66 45 chr5 153381677 153382801 -49702731 - L1MB3 LINE L1 -3950 2469 1050 2347 98 3 3 chr5 153382801 153383107 -49702425 - AluSx SINE Alu -6 306 1 8879 207 66 45 chr5 153383107 153383214 -49702318 - L1MB3 LINE L1 -5369 1050 947 966 179 25 0 chr5 153383214 153383376 -49702156 - FRAM SINE Alu 0 166 1 249 196 0 0 chr5 153383397 153383448 -49702084 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 297 355 75 24 chr5 153383656 153383991 -49701541 - L2 LINE L2 -979 2335 1984 1028 174 0 0 chr5 153384040 153384201 -49701331 - AluJb SINE Alu -17 295 135 2041 147 3 6 chr5 153384202 153384515 -49701017 - AluSq SINE Alu -1 312 1 1730 113 121 0 chr5 153384542 153384798 -49700734 + AluSc SINE Alu 1 287 -12 3973 100 0 6 chr5 153385794 153386324 -49699208 - MER1A DNA MER1_type 0 527 1 378 229 61 103 chr5 153390933 153391147 -49694385 - MIR SINE MIR -1 261 57 327 268 116 18 chr5 153391166 153391278 -49694254 - MER5C DNA MER1_type -186 138 16 261 301 23 53 chr5 153391340 153391473 -49694059 - MIR SINE MIR -48 214 86 2275 71 134 51 chr5 153391641 153391977 -49693555 + THE1B LTR MaLR 1 364 0 799 233 93 6 chr5 153392283 153392455 -49693077 + MER5A DNA MER1_type 1 187 -2 397 234 121 67 chr5 153392547 153392829 -49692703 - L1 LINE L1 -2974 3172 2876 1785 158 138 0 chr5 153393132 153393436 -49692096 + MER7A DNA MER2_type 2 345 -1 261 302 0 21 chr5 153394118 153394214 -49691318 - HAL1 LINE L1 -880 1627 1534 255 292 128 36 chr5 153397635 153397909 -49687623 + L1ME4a LINE L1 4015 4313 -1833 24 0 0 0 chr5 153398290 153398314 -49687218 + AT_rich Low_complexity Low_complexity 1 24 0 246 318 62 8 chr5 153398681 153398810 -49686722 + L1ME4a LINE L1 5499 5634 -530 509 272 155 42 chr5 153400742 153400955 -49684577 - MIR SINE MIR -19 243 7 2276 83 3 3 chr5 153401162 153401452 -49684080 - AluY SINE Alu -21 290 1 470 308 92 18 chr5 153403209 153403544 -49681988 + L1ME4a LINE L1 5670 6029 -92 584 271 130 5 chr5 153405573 153405765 -49679767 + MIR SINE MIR 31 246 -16 505 285 118 0 chr5 153405914 153405973 -49679559 - MER3 DNA MER1_type -1 208 157 1910 128 27 14 chr5 153405973 153406269 -49679263 + AluSq SINE Alu 1 300 -13 505 285 118 0 chr5 153406269 153406395 -49679137 - MER3 DNA MER1_type -52 157 1 300 192 0 0 chr5 153407833 153407885 -49677647 + LTR30 LTR ERV1 1 52 -670 815 191 80 44 chr5 153407885 153408110 -49677422 + LTR12 LTR ERV1 53 285 -429 276 275 11 0 chr5 153408110 153408201 -49677331 + LTR30 LTR ERV1 552 643 -79 706 130 0 0 chr5 153408203 153408303 -49677229 + LTR12 LTR ERV1 615 714 0 610 328 66 50 chr5 153408535 153409206 -49676326 + L2 LINE L2 2551 3272 0 348 253 68 41 chr5 153409213 153409359 -49676173 + MIR SINE MIR 100 249 -13 278 170 19 0 chr5 153409675 153409728 -49675804 - MIR SINE MIR -167 95 42 1803 107 157 0 chr5 153412004 153412265 -49673267 + AluSx SINE Alu 1 302 0 343 323 73 56 chr5 153412278 153412510 -49673022 + MIR SINE MIR 26 261 -1 206 320 58 19 chr5 153412653 153412756 -49672776 - MIR3 SINE MIR -92 116 10 241 230 74 89 chr5 153412812 153412947 -49672585 + MIR SINE MIR 18 150 -112 242 159 0 0 chr5 153414174 153414218 -49671314 - L2 LINE L2 -217 3055 3012 1914 128 28 3 chr5 153414366 153414654 -49670878 + AluSx SINE Alu 1 295 -17 350 314 33 33 chr5 153416927 153417226 -49668306 + HAL1b LINE L1 53 351 -997 7561 90 12 0 chr5 153417228 153418262 -49667270 - L1PA7 LINE L1 -1275 4871 3826 7177 67 11 1 chr5 153418264 153419536 -49665996 + L1PA7 LINE L1 4873 6147 -7 378 0 0 0 chr5 153419537 153419579 -49665953 + (CA)n Simple_repeat Simple_repeat 2 43 0 364 301 48 40 chr5 153419590 153419839 -49665693 + HAL1b LINE L1 371 621 -727 239 342 19 13 chr5 153419841 153419999 -49665533 + HAL1b LINE L1 732 890 -458 599 244 202 26 chr5 153420447 153420759 -49664773 + L1MC4a LINE L1 5614 5980 -1828 190 361 35 55 chr5 153421232 153421487 -49664045 + L2 LINE L2 3008 3257 -15 375 290 105 20 chr5 153423322 153423522 -49662010 - MIR SINE MIR -17 245 29 479 290 111 6 chr5 153423711 153423873 -49661659 - MIR SINE MIR -69 193 15 557 197 125 99 chr5 153424067 153424442 -49661090 + L1ME4a LINE L1 5714 6098 -23 225 0 0 0 chr5 153424467 153424492 -49661040 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2146 142 73 59 chr5 153425227 153425649 -49659883 + MSTA LTR MaLR 1 428 0 2203 86 0 31 chr5 153426414 153426705 -49658827 + AluY SINE Alu 1 282 -29 1237 170 38 9 chr5 153429285 153429497 -49656035 + MER20 DNA MER1_type 1 218 -1 21 0 0 0 chr5 153430031 153430052 -49655480 + AT_rich Low_complexity Low_complexity 1 21 0 260 277 25 34 chr5 153430131 153430250 -49655282 + L1M4 LINE L1 5266 5383 -763 551 229 87 67 chr5 153430619 153430872 -49654660 - L1ME4a LINE L1 -206 5915 5658 396 333 5 32 chr5 153430894 153431083 -49654449 + L1ME3A LINE L1 1628 1811 -4585 1246 268 103 35 chr5 153431691 153432574 -49652958 + L1ME3A LINE L1 5079 6020 -219 24 77 0 0 chr5 153432793 153432845 -49652687 + AT_rich Low_complexity Low_complexity 1 52 0 842 245 121 87 chr5 153433240 153433767 -49651765 + MLT1G1 LTR MaLR 51 595 0 837 285 28 16 chr5 153434271 153434520 -49651012 + MIR SINE MIR 2 253 -9 189 0 0 0 chr5 153435215 153435236 -49650296 + (T)n Simple_repeat Simple_repeat 1 21 0 2861 159 42 11 chr5 153435989 153436511 -49649021 + L1MB1 LINE L1 5611 6148 -20 186 326 157 0 chr5 153436725 153436814 -49648718 - L2 LINE L2 -3 3310 3208 395 212 178 68 chr5 153436828 153436946 -49648586 + FLAM_A SINE Alu 1 131 -2 181 231 0 0 chr5 153437029 153437068 -49648464 - MIR SINE MIR -119 143 105 2224 160 30 27 chr5 153437503 153437850 -49647682 + MLT2D LTR ERVL 8 358 -56 207 0 0 0 chr5 153437850 153437873 -49647659 + (TCTCCC)n Simple_repeat Simple_repeat 6 28 0 2224 160 30 27 chr5 153437873 153437931 -49647601 + MLT2D LTR ERVL 358 414 0 359 235 0 0 chr5 153438122 153438190 -49647342 - L2 LINE L2 0 3313 3246 260 191 0 0 chr5 153438214 153438261 -49647271 + L2 LINE L2 3267 3313 0 867 206 10 60 chr5 153438694 153438893 -49646639 + MER3 DNA MER1_type 1 189 -20 439 259 95 14 chr5 153440699 153440846 -49644686 - MIR SINE MIR -76 186 28 720 212 0 0 chr5 153440973 153441091 -49644441 + FLAM_C SINE Alu 1 118 -15 617 302 113 44 chr5 153441686 153442255 -49643277 + L1ME4a LINE L1 5326 5933 -188 230 275 0 14 chr5 153443170 153443239 -49642293 + L1MC4 LINE L1 6636 6703 -1339 192 100 56 56 chr5 153443249 153443339 -49642193 + (TA)n Simple_repeat Simple_repeat 2 91 0 229 264 38 38 chr5 153444844 153444950 -49640582 + L2 LINE L2 2968 3073 -199 869 108 16 8 chr5 153445030 153445159 -49640373 - AluJo SINE Alu -178 134 5 420 351 39 0 chr5 153445202 153445356 -49640176 + L2 LINE L2 3107 3266 -6 189 296 0 0 chr5 153445446 153445490 -49640042 - L2 LINE L2 -92 3180 3137 430 349 38 29 chr5 153445768 153445977 -49639555 - MIR SINE MIR -22 240 30 217 250 50 25 chr5 153447153 153447233 -49638299 - L2 LINE L2 -31 3282 3201 259 348 109 39 chr5 153447631 153447861 -49637671 + L2 LINE L2 3027 3272 0 255 274 59 29 chr5 153448659 153448761 -49636771 + L2 LINE L2 3201 3305 -8 235 213 67 13 chr5 153448767 153448842 -49636690 - MLT1J1 LTR MaLR 0 446 368 26 30 0 0 chr5 153450043 153450076 -49635456 + AT_rich Low_complexity Low_complexity 1 33 0 274 234 84 75 chr5 153450076 153450183 -49635349 + L2 LINE L2 3175 3282 -31 386 329 30 18 chr5 153450317 153450484 -49635048 - MIR SINE MIR -23 239 71 297 0 0 0 chr5 153450530 153450563 -49634969 + (T)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr5 153452272 153452300 -49633232 + AT_rich Low_complexity Low_complexity 1 28 0 11627 183 60 31 chr5 153452309 153455325 -49630207 + L1MC3 LINE L1 4686 7785 0 250 344 112 18 chr5 153455672 153455896 -49629636 + MIR SINE MIR 6 250 -12 8578 21 0 0 chr5 153455904 153457612 -49627920 - L1PA2 LINE L1 0 6155 4448 6643 214 44 25 chr5 153457612 153459198 -49626334 - L1M4 LINE L1 -4921 1621 5 2387 148 12 58 chr5 153461089 153461521 -49624011 - MLT2D LTR ERVL 0 414 3 336 281 43 58 chr5 153464513 153464652 -49620880 - MIR3 SINE MIR -14 194 58 194 246 14 29 chr5 153464805 153464874 -49620658 - MIR SINE MIR -14 248 181 481 335 95 0 chr5 153464897 153465118 -49620414 + MIR SINE MIR 21 262 0 2158 120 0 0 chr5 153465406 153465717 -49619815 + AluSx SINE Alu 1 311 0 230 261 15 0 chr5 153517620 153517685 -49567847 - L2 LINE L2 -217 3055 2990 1919 128 28 3 chr5 153517812 153518100 -49567432 + AluSx SINE Alu 1 295 -17 270 331 36 21 chr5 153520391 153520672 -49564860 + HAL1b LINE L1 67 351 -997 7026 90 12 0 chr5 153520674 153521708 -49563824 - L1PA7 LINE L1 -1275 4871 3826 6698 67 11 1 chr5 153521710 153522982 -49562550 + L1PA7 LINE L1 4873 6147 -7 387 0 0 0 chr5 153522983 153523026 -49562506 + (CA)n Simple_repeat Simple_repeat 2 44 0 280 313 44 36 chr5 153523038 153523287 -49562245 + HAL1b LINE L1 371 621 -727 387 365 15 15 chr5 153523289 153523489 -49562043 + HAL1b LINE L1 732 931 -417 467 234 209 22 chr5 153523895 153524168 -49561364 + L1MC4a LINE L1 5614 5937 -1871 203 361 35 55 chr5 153524680 153524935 -49560597 + L2 LINE L2 3008 3257 -15 180 308 33 117 chr5 153525182 153525396 -49560136 - MIR SINE MIR -59 203 8 384 290 89 33 chr5 153526770 153526984 -49558548 - MIR SINE MIR -17 245 20 478 290 111 6 chr5 153527159 153527321 -49558211 - MIR SINE MIR -69 193 15 414 210 99 33 chr5 153527527 153527708 -49557824 + L1ME4a LINE L1 5734 5926 -195 200 205 0 0 chr5 153527746 153527785 -49557747 + GA-rich Low_complexity Low_complexity 1 39 0 225 0 0 0 chr5 153527915 153527940 -49557592 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1961 142 73 59 chr5 153528675 153529097 -49556435 + MSTA LTR MaLR 1 428 0 2195 86 0 31 chr5 153529862 153530153 -49555379 + AluY SINE Alu 1 282 -29 1140 170 38 9 chr5 153532733 153532945 -49552587 + MER20 DNA MER1_type 1 218 -1 21 0 0 0 chr5 153533479 153533500 -49552032 + AT_rich Low_complexity Low_complexity 1 21 0 435 294 150 65 chr5 153533569 153533870 -49551662 + L1ME LINE L1 5256 5582 -602 464 217 89 72 chr5 153534067 153534302 -49551230 - L1ME4a LINE L1 -206 5915 5677 410 333 5 32 chr5 153534342 153534531 -49551001 + L1ME3A LINE L1 1628 1811 -4585 1012 274 101 23 chr5 153535256 153536020 -49549512 + L1ME3A LINE L1 5196 6018 -221 24 77 0 0 chr5 153536241 153536293 -49549239 + AT_rich Low_complexity Low_complexity 1 52 0 664 243 123 89 chr5 153536688 153537215 -49548317 + MLT1G1 LTR MaLR 51 595 0 853 285 28 16 chr5 153537719 153537968 -49547564 + MIR SINE MIR 2 253 -9 189 0 0 0 chr5 153538663 153538684 -49546848 + (T)n Simple_repeat Simple_repeat 1 21 0 2608 159 42 11 chr5 153539439 153539961 -49545571 + L1MB1 LINE L1 5611 6148 -20 198 326 157 0 chr5 153540175 153540264 -49545268 - L2 LINE L2 -3 3310 3208 356 212 178 68 chr5 153540278 153540396 -49545136 + FLAM_A SINE Alu 1 131 -2 182 231 0 0 chr5 153540479 153540518 -49545014 - MIR SINE MIR -119 143 105 2215 160 30 27 chr5 153540953 153541300 -49544232 + MLT2D LTR ERVL 8 358 -56 207 0 0 0 chr5 153541300 153541323 -49544209 + (TCTCCC)n Simple_repeat Simple_repeat 6 28 0 2215 160 30 27 chr5 153541323 153541381 -49544151 + MLT2D LTR ERVL 358 414 0 338 235 0 0 chr5 153541572 153541640 -49543892 - L2 LINE L2 0 3313 3246 246 191 0 0 chr5 153541664 153541711 -49543821 + L2 LINE L2 3267 3313 0 870 201 10 60 chr5 153542144 153542343 -49543189 + MER3 DNA MER1_type 1 189 -20 392 259 95 14 chr5 153544149 153544296 -49541236 - MIR SINE MIR -76 186 28 669 212 0 0 chr5 153544423 153544541 -49540991 + FLAM_C SINE Alu 1 118 -15 569 301 113 44 chr5 153545136 153545705 -49539827 + L1ME4a LINE L1 5326 5933 -188 365 193 35 29 chr5 153546618 153546789 -49538743 + (TA)n Simple_repeat Simple_repeat 2 173 0 198 264 38 38 chr5 153548294 153548400 -49537132 + L2 LINE L2 2968 3073 -199 873 108 16 8 chr5 153548480 153548609 -49536923 - AluJo SINE Alu -178 134 5 376 351 39 0 chr5 153548652 153548806 -49536726 + L2 LINE L2 3107 3266 -6 376 349 38 29 chr5 153549218 153549427 -49536105 - MIR SINE MIR -22 240 30 193 250 50 25 chr5 153550603 153550683 -49534849 - L2 LINE L2 -31 3282 3201 191 348 109 39 chr5 153551081 153551311 -49534221 + L2 LINE L2 3027 3272 0 225 274 59 29 chr5 153552109 153552211 -49533321 + L2 LINE L2 3201 3305 -8 227 213 67 13 chr5 153552217 153552292 -49533240 - MLT1J1 LTR MaLR 0 446 368 26 30 0 0 chr5 153553493 153553526 -49532006 + AT_rich Low_complexity Low_complexity 1 33 0 240 234 84 75 chr5 153553526 153553633 -49531899 + L2 LINE L2 3175 3282 -31 342 341 30 18 chr5 153553767 153553934 -49531598 - MIR SINE MIR -23 239 71 297 0 0 0 chr5 153553980 153554013 -49531519 + (T)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr5 153555722 153555750 -49529782 + AT_rich Low_complexity Low_complexity 1 28 0 11457 184 60 31 chr5 153555759 153558775 -49526757 + L1MC3 LINE L1 4686 7785 0 203 330 140 6 chr5 153559167 153559346 -49526186 + MIR SINE MIR 48 250 -12 44021 30 22 1 chr5 153559354 153565368 -49520164 - L1PA2 LINE L1 0 6155 12 1197 229 101 82 chr5 153566564 153567040 -49518492 + MLT1J LTR MaLR 16 500 -11 855 248 45 10 chr5 153567153 153567467 -49518065 + L1ME4a LINE L1 5552 5876 -245 629 290 96 27 chr5 153568193 153568595 -49516937 - MLT1L LTR MaLR -10 605 72 614 295 62 5 chr5 153568825 153569035 -49516497 - MIR SINE MIR -17 245 24 239 302 63 0 chr5 153569559 153569622 -49515910 - L2 LINE L2 -60 3212 3146 183 286 0 18 chr5 153569955 153570011 -49515521 + L2 LINE L2 3217 3271 -1 224 234 39 39 chr5 153570782 153570859 -49514673 - L2 LINE L2 -5 3308 3232 492 288 165 5 chr5 153572930 153573142 -49512390 + MIR SINE MIR 1 246 -16 942 274 106 19 chr5 153573285 153573843 -49511689 - L2 LINE L2 -101 3212 2597 398 233 35 26 chr5 153573849 153573965 -49511567 - L2 LINE L2 -955 2359 2243 6129 110 20 0 chr5 153574162 153575324 -49510208 + L1PA15 LINE L1 4994 6165 0 369 0 0 0 chr5 153577236 153577277 -49508255 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2885 13 3 0 chr5 153577669 153577982 -49507550 + AluYb8 SINE Alu 1 314 -4 270 81 0 0 chr5 153579078 153579115 -49506417 + (TG)n Simple_repeat Simple_repeat 2 38 0 2146 136 0 0 chr5 153579662 153579963 -49505569 + AluSx SINE Alu 1 301 -11 700 213 62 80 chr5 153580270 153580629 -49504903 + MER31-int LTR ERV1 3400 5552 -1046 2111 148 0 0 chr5 153580851 153581154 -49504378 - AluSx SINE Alu -9 303 1 272 156 21 73 chr5 153581325 153581421 -49504111 + MER31-int LTR ERV1 4119 4209 -727 231 36 0 0 chr5 153581676 153581704 -49503828 + (CA)n Simple_repeat Simple_repeat 1 28 0 207 0 0 0 chr5 153581703 153581726 -49503806 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 255 246 58 0 chr5 153583356 153583425 -49502107 - MIR SINE MIR -111 151 79 520 317 53 63 chr5 153584759 153585062 -49500470 + MLT1I LTR MaLR 93 392 -17 236 227 11 102 chr5 153585126 153585214 -49500318 + L2 LINE L2 3228 3307 -6 1770 140 104 11 chr5 153585731 153586009 -49499523 - AluJo SINE Alu -8 304 1 413 169 14 0 chr5 153586628 153586699 -49498833 + MLT1I LTR MaLR 394 465 -2 320 294 272 3 chr5 153587859 153588216 -49497316 - L2 LINE L2 -7 3306 2854 973 263 89 81 chr5 153588369 153589228 -49496304 + L1MC4 LINE L1 7086 7954 -88 2194 100 0 13 chr5 153589228 153589399 -49496133 - AluSq SINE Alu -9 304 137 2406 62 3 0 chr5 153589399 153589718 -49495814 - AluY SINE Alu 0 311 1 2194 100 0 13 chr5 153589718 153589846 -49495686 - AluSq SINE Alu -176 137 9 973 263 89 81 chr5 153589846 153589933 -49495599 + L1MC4 LINE L1 7954 8039 -3 1908 172 5 37 chr5 153591077 153591455 -49494077 - MER47A DNA MER2_type 0 366 1 303 318 11 0 chr5 153591551 153591639 -49493893 - MIR SINE MIR -108 154 66 2413 48 0 3 chr5 153591646 153591939 -49493593 - AluY SINE Alu -19 292 1 220 233 93 47 chr5 153592608 153592694 -49492838 - MIR SINE MIR -65 197 108 278 300 10 10 chr5 153592714 153592814 -49492718 + GA-rich Low_complexity Low_complexity 5 104 0 215 281 70 0 chr5 153593416 153593473 -49492059 + L2 LINE L2 3241 3301 -12 218 354 53 49 chr5 153593493 153593778 -49491754 + L2 LINE L2 2640 2925 -389 235 291 146 27 chr5 153593907 153594017 -49491515 + L2 LINE L2 3175 3297 -16 567 319 28 9 chr5 153594817 153595033 -49490499 - MIR SINE MIR -25 237 18 335 312 16 16 chr5 153595285 153595410 -49490122 + L2 LINE L2 3189 3313 0 470 243 86 40 chr5 153598038 153598190 -49487342 + MIR SINE MIR 8 166 -96 640 311 0 0 chr5 153598204 153598371 -49487161 - L2 LINE L2 -1 3312 3146 646 294 47 5 chr5 153598624 153598838 -49486694 + MIR SINE MIR 21 243 -19 201 167 42 62 chr5 153599133 153599181 -49486351 + L2 LINE L2 3134 3180 -92 222 235 0 0 chr5 153599424 153599475 -49486057 + A-rich Low_complexity Low_complexity 1 51 0 219 302 0 0 chr5 153600448 153600501 -49485031 - MIR SINE MIR -54 208 156 248 296 153 0 chr5 153600692 153600790 -49484742 + MIR SINE MIR 118 230 -32 238 309 41 65 chr5 153601372 153601495 -49484037 - L2 LINE L2 -6 3307 3188 384 331 8 8 chr5 153601628 153601749 -49483783 - MIR SINE MIR -65 143 23 295 331 83 0 chr5 153602030 153602175 -49483357 + MIR SINE MIR 79 235 -27 228 158 0 0 chr5 153602828 153602866 -49482666 + MIR3 SINE MIR 144 181 -27 322 257 14 0 chr5 153605959 153606029 -49479503 - L2 LINE L2 -9 3263 3193 203 300 10 20 chr5 153606708 153606808 -49478724 + L2 LINE L2 2779 2877 -437 469 333 72 42 chr5 153606813 153607146 -49478386 - L2 LINE L2 -14 3299 2957 361 316 102 17 chr5 153607208 153607385 -49478147 + L2 LINE L2 3027 3218 -54 2222 142 94 23 chr5 153607515 153607910 -49477622 - MSTC LTR MaLR -5 423 1 962 293 168 11 chr5 153608135 153609007 -49476525 - L2 LINE L2 -5 3308 2293 2663 152 19 2 chr5 153609096 153609524 -49476008 - Tigger1 DNA MER2_type 0 2418 1984 * 3554 173 16 7 chr5 153609508 153610125 -49475407 - Tigger1 DNA MER2_type -1794 624 2 488 309 58 31 chr5 153610163 153610354 -49475178 + MIR SINE MIR 46 241 -21 24 67 0 0 chr5 153611450 153611495 -49474037 + AT_rich Low_complexity Low_complexity 1 45 0 234 359 58 34 chr5 153611602 153611808 -49473724 + MIR SINE MIR 28 238 -24 676 308 50 12 chr5 153612784 153613024 -49472508 - MIR SINE MIR 0 262 14 300 95 0 0 chr5 153614057 153614099 -49471433 + MADE1 DNA Mariner 2 43 -37 288 244 23 0 chr5 153614298 153614384 -49471148 - L1MC4 LINE L1 -1340 6702 6615 255 222 0 61 chr5 153614303 153614402 -49471130 + L1MC4 LINE L1 6614 6706 -1336 * 281 290 20 20 chr5 153614404 153614504 -49471028 - L1MEd LINE L1 -5745 374 275 397 222 167 21 chr5 153614649 153614793 -49470739 - L1MEd LINE L1 -5942 177 13 470 333 73 18 chr5 153617049 153617322 -49468210 + MLT1K LTR MaLR 301 588 0 624 269 56 56 chr5 153617380 153617596 -49467936 + MIR SINE MIR 31 246 -16 26 19 0 58 chr5 153617623 153617651 -49467881 + AT_rich Low_complexity Low_complexity 1 26 -23 1048 229 122 66 chr5 153617651 153617699 -49467833 + MLT1J LTR MaLR 1 45 -466 1919 144 17 0 chr5 153617699 153617997 -49467535 - AluSx SINE Alu -4 308 6 1048 229 122 66 chr5 153617997 153618432 -49467100 + MLT1J LTR MaLR 45 511 0 26 19 0 58 chr5 153618432 153618455 -49467077 + AT_rich Low_complexity Low_complexity 26 49 0 2247 117 124 16 chr5 153618787 153619173 -49466359 + MSTA LTR MaLR 1 428 0 2752 130 112 49 chr5 153619219 153619712 -49465820 + MER1A DNA MER1_type 4 527 0 634 302 95 65 chr5 153621321 153622017 -49463515 + L2 LINE L2 2554 3272 0 685 297 157 31 chr5 153624360 153624781 -49460751 + L2 LINE L2 2840 3313 0 263 255 41 69 chr5 153624853 153624998 -49460534 - L2 LINE L2 -550 2764 2624 382 202 0 18 chr5 153625020 153625110 -49460422 + MER5A DNA MER1_type 4 91 -98 286 198 11 99 chr5 153625484 153625575 -49459957 + L2 LINE L2 3226 3308 -5 790 287 45 16 chr5 153628188 153628435 -49457097 + MIR SINE MIR 9 262 0 243 359 21 49 chr5 153628888 153629030 -49456502 - MIR3 SINE MIR -1 207 70 493 252 43 7 chr5 153629951 153630090 -49455442 - MIR3 SINE MIR -1 207 64 207 327 0 0 chr5 153631015 153631070 -49454462 + L2 LINE L2 2687 2741 -573 2222 81 0 10 chr5 153631079 153631376 -49454156 + AluSq SINE Alu 1 294 -19 2420 210 114 9 chr5 153632588 153633159 -49452373 + MER99 DNA DNA 3 633 -195 301 295 72 43 chr5 153633626 153633765 -49451767 - MIR SINE MIR -6 256 114 257 343 10 0 chr5 153634565 153634667 -49450865 - MIR SINE MIR -1 261 159 327 153 66 36 chr5 153636265 153636402 -49449130 + (TTATA)n Simple_repeat Simple_repeat 5 145 0 319 240 54 113 chr5 153636467 153636671 -49448861 - L1MCa LINE L1 -4283 2143 1952 387 0 0 0 chr5 153636959 153637002 -49448530 + (CA)n Simple_repeat Simple_repeat 2 44 0 241 256 44 88 chr5 153638331 153638468 -49447064 + L3 LINE CR1 1334 1464 -113 296 286 229 21 chr5 153638536 153638676 -49446856 - L1ME LINE L1 -420 5701 5533 376 276 95 0 chr5 153639913 153640029 -49445503 - L2 LINE L2 0 3272 3146 1610 186 54 17 chr5 153640107 153640457 -49445075 + MLT1A1 LTR MaLR 1 363 -2 3422 177 34 90 chr5 153640461 153640720 -49444812 + MLT1A1-int LTR MaLR 2 274 -1461 2132 156 53 26 chr5 153640720 153641138 -49444394 + MSTB1 LTR MaLR 4 432 0 3422 177 34 90 chr5 153641138 153641204 -49444328 + MLT1A1-int LTR MaLR 274 342 -1393 1900 117 39 0 chr5 153641204 153641487 -49444045 + AluSp SINE Alu 4 297 -16 3422 177 34 90 chr5 153641487 153641978 -49443554 + MLT1A1-int LTR MaLR 342 770 -965 247 256 26 181 chr5 153642018 153642245 -49443287 + MLT1A1-int LTR MaLR 1150 1341 -394 2362 183 19 2 chr5 153642280 153642691 -49442841 + MLT1A1-int LTR MaLR 1318 1735 0 2110 176 19 3 chr5 153642691 153643050 -49442482 + MLT1A1 LTR MaLR 1 365 0 205 263 35 0 chr5 153643185 153643242 -49442290 - MIR SINE MIR -7 255 197 213 276 81 49 chr5 153643317 153643440 -49442092 + MIR SINE MIR 9 135 -127 211 342 69 65 chr5 153643759 153644019 -49441513 + L2 LINE L2 2716 2976 -338 1662 169 69 91 chr5 153644046 153644497 -49441035 - LTR8A LTR ERV1 0 727 287 629 203 64 200 chr5 153644545 153644875 -49440657 - LTR8 LTR ERV1 -425 266 1 424 290 129 11 chr5 153644932 153645118 -49440414 + L2 LINE L2 3106 3313 0 2116 115 0 3 chr5 153646044 153646340 -49439192 + AluSc SINE Alu 1 295 -14 2618 39 0 0 chr5 153646409 153646718 -49438814 + AluY SINE Alu 3 311 0 549 0 0 0 chr5 153646724 153646785 -49438747 + (TA)n Simple_repeat Simple_repeat 1 61 0 1291 96 0 0 chr5 153646785 153646963 -49438569 + AluY SINE Alu 130 307 -4 310 222 14 14 chr5 153698160 153698232 -49387300 + HAL1 LINE L1 1647 1718 -789 395 308 6 26 chr5 153698246 153698402 -49387130 - MIR SINE MIR -99 163 11 356 40 20 0 chr5 153698660 153698710 -49386822 + (CA)n Simple_repeat Simple_repeat 2 52 0 243 239 42 14 chr5 153698916 153698987 -49386545 + L2 LINE L2 3145 3217 -55 856 123 35 6 chr5 153699173 153699343 -49386189 + L1MA3 LINE L1 3097 3271 -2875 * 6654 119 36 5 chr5 153699342 153700722 -49384810 + L1MA3 LINE L1 4877 6305 0 440 324 55 18 chr5 153700888 153701107 -49384425 - MIR SINE MIR -7 255 29 1165 201 123 13 chr5 153701262 153701570 -49383962 + MER2 DNA MER2_type 3 344 0 362 324 88 46 chr5 153701579 153701644 -49383888 - MIR SINE MIR -32 230 169 1258 216 26 62 chr5 153701644 153701826 -49383706 + MLT1A2 LTR MaLR 1 163 -211 315 0 0 0 chr5 153701826 153701861 -49383671 + (TC)n Simple_repeat Simple_repeat 2 36 0 1258 216 26 62 chr5 153701861 153702062 -49383470 + MLT1A2 LTR MaLR 163 370 -4 362 324 88 46 chr5 153702062 153702212 -49383320 - MIR SINE MIR -93 169 6 211 324 204 0 chr5 153702522 153702664 -49382868 + L2 LINE L2 3094 3264 -8 295 183 125 50 chr5 153704554 153704674 -49380858 + LTR67 LTR ERVL 426 554 -3 343 321 76 0 chr5 153705134 153705265 -49380267 - MIR SINE MIR -71 191 51 289 318 95 29 chr5 153705517 153705759 -49379773 - L3b LINE CR1 -214 1369 1112 542 289 95 30 chr5 153706782 153707014 -49378518 + MIR SINE MIR 2 248 -14 243 0 0 0 chr5 153707740 153707767 -49377765 + (TG)n Simple_repeat Simple_repeat 2 28 0 335 257 53 26 chr5 153709427 153709540 -49375992 + L2 LINE L2 3162 3277 -36 272 296 88 0 chr5 153709688 153709813 -49375719 - MIR SINE MIR -78 184 49 183 188 0 62 chr5 153710164 153710212 -49375320 + L2 LINE L2 3204 3248 -24 415 289 98 0 chr5 153711165 153711338 -49374194 - MIR SINE MIR -15 247 58 204 306 105 16 chr5 153712079 153712203 -49373329 + MIR SINE MIR 96 230 -32 2338 106 0 3 chr5 153713864 153714176 -49371356 - AluSx SINE Alu -1 311 1 540 218 166 38 chr5 153716565 153716776 -49368756 + MIR SINE MIR 20 257 -5 225 307 79 0 chr5 153716838 153716939 -49368593 - MIR SINE MIR -4 258 150 248 313 100 43 chr5 153718840 153719070 -49366462 - L2 LINE L2 -194 3078 2836 227 258 96 76 chr5 153720427 153720488 -49365044 + L1ME LINE L1 5690 5748 -373 1399 201 37 67 chr5 153720488 153720890 -49364642 - MLT1B LTR MaLR 0 390 1 227 258 96 76 chr5 153720890 153721026 -49364506 + L1ME LINE L1 5748 5891 -230 201 320 62 10 chr5 153721028 153721125 -49364407 - MIR SINE MIR -73 135 34 250 321 107 8 chr5 153721847 153721978 -49363554 - MIR SINE MIR -112 150 7 289 301 135 18 chr5 153722963 153723126 -49362406 + MIR SINE MIR 62 243 -19 784 185 0 0 chr5 153724274 153724409 -49361123 - FLAM_C SINE Alu -8 135 1 180 337 20 30 chr5 153726019 153726120 -49359412 - MIR SINE MIR -85 123 24 * 278 293 19 38 chr5 153726114 153726220 -49359312 + L2 LINE L2 3200 3303 -10 186 305 53 42 chr5 153726255 153726350 -49359182 + L2 LINE L2 3161 3256 -16 345 375 0 0 chr5 153726527 153726655 -49358877 - L2 LINE L2 0 3272 3145 274 269 21 21 chr5 153726665 153726689 -49358843 + GA-rich Low_complexity Low_complexity 5 28 -69 2118 140 0 13 chr5 153726689 153727004 -49358528 + AluJo SINE Alu 1 311 -1 274 269 21 21 chr5 153727004 153727072 -49358460 + GA-rich Low_complexity Low_complexity 27 97 0 398 296 58 54 chr5 153727076 153727123 -49358409 - L2 LINE L2 -169 3144 3099 2315 96 3 0 chr5 153727123 153727414 -49358118 + AluSp SINE Alu 1 292 -21 398 296 58 54 chr5 153727414 153727589 -49357943 - L2 LINE L2 -214 3099 2921 374 301 127 6 chr5 153728041 153728214 -49357318 + MIR SINE MIR 20 213 -49 290 319 49 43 chr5 153729784 153729969 -49355563 - MIR SINE MIR -49 213 28 395 289 77 39 chr5 153730005 153730161 -49355371 + Charlie8 DNA MER1_type 38 199 -2218 1969 143 0 17 chr5 153730895 153731196 -49354336 + AluSq SINE Alu 1 296 -17 2444 120 0 43 chr5 153732513 153732904 -49352628 - L1PB3 LINE L1 -71 6083 5710 577 124 0 0 chr5 153732904 153732993 -49352539 - Tigger1 DNA MER2_type -675 1743 1655 2434 118 11 0 chr5 153733086 153733449 -49352083 - L1PB1 LINE L1 -2 6149 5783 371 89 73 8 chr5 153733449 153733572 -49351960 + (TA)n Simple_repeat Simple_repeat 1 131 0 595 37 106 0 chr5 153733615 153733776 -49351756 + (TA)n Simple_repeat Simple_repeat 1 178 0 25 31 0 0 chr5 153733777 153733809 -49351723 + AT_rich Low_complexity Low_complexity 1 32 0 2204 114 12 3 chr5 153733809 153734134 -49351398 + L1P5 LINE L1 5464 5791 -360 304 101 88 7 chr5 153734134 153734282 -49351250 + (TA)n Simple_repeat Simple_repeat 1 160 0 21 0 0 0 chr5 153734724 153734745 -49350787 + AT_rich Low_complexity Low_complexity 1 21 0 2188 122 0 10 chr5 153735245 153735557 -49349975 - AluSx SINE Alu -3 309 1 967 178 9 96 chr5 153735598 153735828 -49349704 + MER20 DNA MER1_type 9 218 -1 455 301 17 23 chr5 153736014 153736187 -49349345 - MIR3 SINE MIR -21 187 16 483 280 23 0 chr5 153736290 153736422 -49349110 - L2 LINE L2 0 3313 3179 281 323 40 0 chr5 153736693 153736792 -49348740 - MIR SINE MIR -70 192 90 18333 143 34 9 chr5 153737379 153741079 -49344453 + L1M1 LINE L1 752 4541 -3024 323 308 100 8 chr5 153742922 153743042 -49342490 + L2 LINE L2 2923 3053 -219 213 206 151 0 chr5 153743104 153743177 -49342355 - MIR SINE MIR -98 164 81 202 290 136 24 chr5 153743210 153743379 -49342153 + L2 LINE L2 3065 3252 -20 364 76 106 0 chr5 153744028 153744094 -49341438 + L1M1 LINE L1 2514 2586 -4979 203 306 133 0 chr5 153744137 153744235 -49341297 - MER5B DNA MER1_type -50 128 18 291 336 22 36 chr5 153744457 153744594 -49340938 + MIR SINE MIR 36 170 -92 267 50 50 0 chr5 153745650 153745690 -49339842 + L2 LINE L2 3182 3223 -49 437 279 64 69 chr5 153747449 153747900 -49337632 + L2 LINE L2 1851 2299 -1015 245 302 0 0 chr5 153748236 153748299 -49337233 - L2 LINE L2 -14 3258 3196 189 238 151 39 chr5 153748813 153748894 -49336638 + L2 LINE L2 2819 2890 -382 15452 138 15 1 chr5 153748894 153751276 -49334256 + Tigger1 DNA MER2_type 4 2418 0 189 238 151 39 chr5 153751276 153751400 -49334132 + L2 LINE L2 2890 3047 -225 447 223 69 8 chr5 153751779 153751909 -49333623 + MIR SINE MIR 63 200 -62 2086 130 19 13 chr5 153752585 153752893 -49332639 + AluSx SINE Alu 1 310 -2 241 271 0 0 chr5 153753239 153753298 -49332234 - L2 LINE L2 -565 2749 2691 267 294 59 22 chr5 153753302 153753438 -49332094 + L1ME LINE L1 5746 5886 -284 219 273 11 45 chr5 153753721 153753809 -49331723 - L2 LINE L2 -614 2700 2616 192 200 0 108 chr5 153753854 153753919 -49331613 - L2 LINE L2 -663 2651 2594 290 303 42 14 chr5 153754987 153755129 -49330403 - L2 LINE L2 -291 2981 2836 571 335 93 23 chr5 153756787 153757505 -49328027 + L2 LINE L2 2536 3305 -8 431 293 18 36 chr5 153758010 153758177 -49327355 + MIR SINE MIR 56 219 -43 537 289 25 44 chr5 153758324 153758553 -49326979 + MIR SINE MIR 30 252 -10 324 294 98 31 chr5 153758747 153759033 -49326499 - L1ME4a LINE L1 -264 5857 5553 862 285 85 9 chr5 153760147 153760487 -49325045 + L2 LINE L2 1933 2298 -1016 527 288 113 63 chr5 153760586 153761232 -49324300 + L2 LINE L2 2529 3310 -3 961 76 35 14 chr5 153761284 153761428 -49324104 - L1PA8 LINE L1 0 6172 6026 189 305 17 0 chr5 153761432 153761491 -49324041 - MIR SINE MIR -115 147 88 351 277 108 17 chr5 153764634 153764865 -49320667 + MIR SINE MIR 11 262 0 364 346 146 31 chr5 153765093 153765842 -49319690 + L2 LINE L2 2406 3232 -40 210 345 93 21 chr5 153765853 153766047 -49319485 + L3 LINE CR1 1260 1467 -110 657 281 29 21 chr5 153766458 153766696 -49318836 - MIR SINE MIR -21 241 2 596 304 20 16 chr5 153767375 153767622 -49317910 - MIR SINE MIR -1 261 14 251 248 0 99 chr5 153768307 153768408 -49317124 - L2 LINE L2 -12 3260 3170 2733 123 0 0 chr5 153769106 153769506 -49316026 + L1PA16 LINE L1 5758 6157 -9 363 335 11 34 chr5 153769558 153769734 -49315798 + MIR SINE MIR 20 191 -71 369 310 82 19 chr5 153771851 153772009 -49313523 + MIR SINE MIR 9 176 -86 376 149 0 95 chr5 153772011 153772085 -49313447 + MER21B LTR ERV1 1 67 -796 4576 180 28 23 chr5 153772135 153772964 -49312568 + MER21B LTR ERV1 20 852 -11 257 226 0 0 chr5 153773112 153773165 -49312367 - L2 LINE L2 -1 3271 3219 442 228 18 0 chr5 153773868 153773982 -49311550 - MIR SINE MIR -106 156 41 296 272 58 0 chr5 153774046 153774149 -49311383 - MIR SINE MIR -31 231 123 323 338 33 10 chr5 153774214 153774369 -49311163 + MIR SINE MIR 20 147 -61 464 290 23 40 chr5 153774803 153774979 -49310553 - MIR SINE MIR -62 200 28 229 312 9 46 chr5 153775098 153775207 -49310325 + L2 LINE L2 3168 3272 0 262 273 114 0 chr5 153776521 153776609 -49308923 - MIR SINE MIR -118 144 47 1988 152 0 0 chr5 153777063 153777353 -49308179 + AluSx SINE Alu 1 290 -22 543 293 35 0 chr5 153778384 153778558 -49306974 - MIR SINE MIR -82 180 1 189 0 0 0 chr5 153778610 153778631 -49306901 + (GGAGAA)n Simple_repeat Simple_repeat 3 23 0 263 211 18 0 chr5 153778666 153778723 -49306809 - MER117 DNA MER1_type -37 160 103 323 277 36 0 chr5 153778811 153778894 -49306638 - MIR SINE MIR -92 116 31 338 293 73 6 chr5 153781046 153781210 -49304322 - MIR SINE MIR -7 255 81 237 162 88 29 chr5 153782149 153782217 -49303315 - Tigger8 DNA MER2_type -119 547 476 181 259 121 0 chr5 153783190 153783248 -49302284 - L3 LINE CR1 -76 1501 1437 238 274 0 0 chr5 153783354 153783416 -49302116 - L2 LINE L2 -4 3309 3248 753 229 42 51 chr5 153783425 153783661 -49301871 + MER106A DNA MER1_type 3 236 0 1082 276 61 48 chr5 153784021 153784561 -49300971 - Tigger8 DNA MER2_type -118 548 2 603 298 34 5 chr5 153785850 153786058 -49299474 + MIR SINE MIR 48 261 -1 657 223 139 0 chr5 153786272 153786438 -49299094 - MER5A DNA MER1_type 0 189 1 341 288 25 25 chr5 153787320 153787438 -49298094 + L2 LINE L2 2917 3034 -238 187 204 41 0 chr5 153787643 153787692 -49297840 + MIR3 SINE MIR 119 169 -39 2023 145 13 7 chr5 153788995 153789305 -49296227 + AluSx SINE Alu 1 312 0 1959 93 3 73 chr5 153790289 153790591 -49294941 - MER1B DNA MER1_type 0 339 59 4425 202 53 27 chr5 153791365 153791685 -49293847 - L1MD2 LINE L1 0 6619 6309 2177 104 7 17 chr5 153791685 153791983 -49293549 - AluSq SINE Alu -18 295 1 4425 202 53 27 chr5 153791983 153793511 -49292021 - L1MD2 LINE L1 -310 6309 4722 3746 135 21 17 chr5 153793717 153794242 -49291290 - MER1A DNA MER1_type 0 527 1 860 248 80 75 chr5 153794253 153794628 -49290904 - L1MD2 LINE L1 -1717 4689 4313 1203 250 73 91 chr5 153794643 153795202 -49290330 - L1MD2 LINE L1 -5853 556 8 310 219 0 73 chr5 153795290 153795372 -49290160 + MLT1F1 LTR MaLR 43 118 -449 254 254 15 0 chr5 153795377 153795444 -49290088 + L1MC4 LINE L1 7309 7376 -666 * 266 175 32 16 chr5 153795440 153795503 -49290029 + L1MD3 LINE L1 7809 7872 -123 825 284 30 24 chr5 153796628 153797185 -49288347 + MER115 DNA AcHobo 57 690 -3 740 237 68 0 chr5 153798362 153798539 -49286993 - MER5A DNA MER1_type 0 189 1 487 326 61 15 chr5 153798601 153798797 -49286735 + MIR SINE MIR 2 206 -56 309 286 75 68 chr5 153799173 153799453 -49286079 + L1MC4a LINE L1 3775 4056 -2090 279 100 25 0 chr5 153799469 153799509 -49286023 - U2 snRNA snRNA -147 41 1 2475 258 41 70 chr5 153799515 153800349 -49285183 + MER21B LTR ERV1 1 810 -53 521 321 63 57 chr5 153800391 153800834 -49284698 + L1MC4a LINE L1 4068 4507 -1639 2281 183 47 5 chr5 153800834 153801243 -49284289 - MSTB LTR MaLR 0 426 1 521 321 63 57 chr5 153801243 153802070 -49283462 + L1MC4a LINE L1 4507 5346 -800 1095 190 61 32 chr5 153802116 153802467 -49283065 + MSTD LTR MaLR 1 396 0 811 290 8 24 chr5 153802470 153802722 -49282810 + L1MC4a LINE L1 5559 5806 -2002 1628 171 3 28 chr5 153802722 153802834 -49282698 + AluJb SINE Alu 1 114 -198 2650 113 8 6 chr5 153802834 153803197 -49282335 + THE1B LTR MaLR 1 364 0 1628 171 3 28 chr5 153803197 153803370 -49282162 + AluJb SINE Alu 114 279 -33 382 271 129 54 chr5 153803386 153803626 -49281906 + L1MC4a LINE L1 5796 6053 -1755 22 56 0 0 chr5 153803681 153803717 -49281815 + AT_rich Low_complexity Low_complexity 1 36 0 278 25 0 25 chr5 153806393 153806433 -49279099 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 448 235 182 0 chr5 153806463 153806595 -49278937 - MER103 DNA DNA -3 163 8 334 346 50 15 chr5 153806792 153806994 -49278538 + MIR SINE MIR 27 235 -27 252 281 59 69 chr5 153807017 153807220 -49278312 - L3 LINE CR1 -202 1375 1175 251 208 28 28 chr5 153807558 153807630 -49277902 + MER5A DNA MER1_type 79 150 -39 2463 126 81 9 chr5 153808245 153808665 -49276867 - MSTB2 LTR MaLR -7 450 1 571 302 72 22 chr5 153809195 153809417 -49276115 + MIR SINE MIR 12 244 -18 413 277 101 51 chr5 153809844 153810140 -49275392 + L1ME4a LINE L1 5595 5825 -296 287 292 114 35 chr5 153810551 153810626 -49274906 + MIR SINE MIR 1 69 -193 1461 216 59 6 chr5 153810626 153810950 -49274582 + MER58B DNA MER1_type 1 341 0 287 292 114 35 chr5 153810950 153811076 -49274456 + MIR SINE MIR 69 218 -44 268 148 56 19 chr5 153811096 153811150 -49274382 + HsTC2 DNA Tc2 31 86 -1812 198 322 50 33 chr5 153811458 153811579 -49273953 - MIR SINE MIR -26 236 114 901 224 6 6 chr5 153811651 153811834 -49273698 - MER5A DNA MER1_type -6 183 1 437 288 48 14 chr5 153812026 153812172 -49273360 + MIR3 SINE MIR 31 181 -27 2326 104 0 3 chr5 153812560 153812859 -49272673 - AluSx SINE Alu -14 298 1 482 360 68 15 chr5 153814157 153814482 -49271050 - L3 LINE CR1 -1 1576 1235 1542 189 123 19 chr5 153816944 153817303 -49268229 - MSTD LTR MaLR 0 396 1 1618 184 34 25 chr5 153817910 153818263 -49267269 + MLT1A1 LTR MaLR 10 365 0 305 270 153 36 chr5 153818796 153818933 -49266599 - MIR SINE MIR -108 154 2 4243 68 0 0 chr5 153819781 153820285 -49265247 + L1PA7 LINE L1 5651 6154 0 180 77 0 0 chr5 153820322 153820348 -49265184 + (A)n Simple_repeat Simple_repeat 1 26 0 395 364 12 0 chr5 153820693 153820855 -49264677 - MIR3 SINE MIR -22 186 23 265 261 81 31 chr5 153820902 153821063 -49264469 + L1ME LINE L1 5715 5883 -283 193 341 49 12 chr5 153823190 153823272 -49262260 + L2 LINE L2 3187 3271 -1 625 281 128 10 chr5 153823528 153823724 -49261808 - MIR SINE MIR -12 250 32 449 190 146 22 chr5 153823822 153823959 -49261573 + MER103 DNA DNA 7 160 -6 189 238 0 0 chr5 153824925 153824967 -49260565 + L2 LINE L2 2716 2757 -557 311 254 136 9 chr5 153826491 153826601 -49258931 + L2 LINE L2 3142 3265 -7 1956 133 3 7 chr5 153831316 153831601 -49253931 + AluSx SINE Alu 1 284 -28 324 0 0 0 chr5 153831601 153831637 -49253895 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 256 183 54 11 chr5 153831961 153832054 -49253478 + (TA)n Simple_repeat Simple_repeat 2 98 0 180 347 0 27 chr5 153834675 153834750 -49250782 + L2 LINE L2 3146 3218 -54 647 288 88 0 chr5 153834966 153835171 -49250361 + MIR SINE MIR 27 249 -13 540 187 58 19 chr5 153836051 153836206 -49249326 - MER5B DNA MER1_type 0 178 18 342 339 100 24 chr5 153836360 153836995 -49248537 + L2 LINE L2 2380 3064 -208 868 182 14 14 chr5 153837651 153837799 -49247733 - AluJo SINE Alu -20 292 145 1099 138 0 0 chr5 153837899 153838051 -49247481 - AluJo SINE Alu -149 163 12 492 281 84 30 chr5 153838056 153838223 -49247309 - MIR SINE MIR -85 177 2 237 283 34 2 chr5 153838391 153838455 -49247077 + MIR SINE MIR 113 176 -32 208 303 76 38 chr5 153839857 153839989 -49245543 - L2 LINE L2 -557 2757 2621 219 147 0 0 chr5 153841095 153841129 -49244403 + MIR3 SINE MIR 169 202 -6 258 116 0 0 chr5 153841869 153841912 -49243620 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 478 268 143 6 chr5 153842729 153842897 -49242635 + MIR SINE MIR 68 258 -4 2122 141 0 3 chr5 153844179 153844492 -49241040 + AluSx SINE Alu 1 312 0 383 381 16 5 chr5 153844731 153844925 -49240607 - MIR SINE MIR -6 256 61 490 255 150 13 chr5 153846632 153846785 -49238747 - MER58C DNA MER1_type -15 200 27 404 282 101 27 chr5 153846788 153846976 -49238556 - MIR SINE MIR -43 219 18 368 342 48 0 chr5 153847134 153847321 -49238211 + MER91A DNA MER1_type 1 196 0 313 327 79 25 chr5 153849732 153849934 -49235598 + MIR SINE MIR 2 214 -48 21 57 0 0 chr5 153849974 153850009 -49235523 + AT_rich Low_complexity Low_complexity 1 35 0 1486 264 56 54 chr5 153850428 153851366 -49234166 + L1ME3A LINE L1 5148 6160 -10 495 299 134 0 chr5 153851642 153851859 -49233673 - MIR SINE MIR 0 262 17 336 306 87 23 chr5 153851992 153852165 -49233367 - MIR SINE MIR -19 243 60 604 280 159 36 chr5 153852532 153852953 -49232579 + MLT1K LTR MaLR 109 581 -7 288 0 0 0 chr5 153853174 153853206 -49232326 + (A)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr5 153853824 153853849 -49231683 + (T)n Simple_repeat Simple_repeat 1 25 0 380 228 35 44 chr5 153854183 153854297 -49231235 - MER5A DNA MER1_type -7 182 70 849 197 44 49 chr5 153854432 153854464 -49231068 + MER3 DNA MER1_type 1 32 -177 2384 46 11 3 chr5 153854464 153854746 -49230786 + AluY SINE Alu 3 286 -25 849 197 44 49 chr5 153854746 153854916 -49230616 + MER3 DNA MER1_type 32 202 -7 309 345 21 13 chr5 153855093 153855242 -49230290 - MIR SINE MIR -65 143 3 790 257 108 45 chr5 153855417 153855841 -49229691 + L2 LINE L2 2807 3257 -56 22 0 0 0 chr5 153856513 153856535 -49228997 + AT_rich Low_complexity Low_complexity 1 22 0 219 267 30 85 chr5 153856572 153856643 -49228889 - MIR SINE MIR -60 202 129 2056 176 22 3 chr5 153856643 153857001 -49228531 + MLT1A1 LTR MaLR 1 365 0 219 267 30 85 chr5 153857001 153857094 -49228438 - MIR SINE MIR -133 129 47 189 255 31 0 chr5 153857716 153857814 -49227718 + (TA)n Simple_repeat Simple_repeat 2 102 0 295 336 0 0 chr5 153857858 153857962 -49227570 + (TA)n Simple_repeat Simple_repeat 2 105 0 437 286 1 4 chr5 153858723 153858871 -49226661 + MIR SINE MIR 31 177 -31 2444 276 58 44 chr5 153859006 153861669 -49223863 - L1ME LINE L1 -3277 2803 132 180 0 0 0 chr5 153862364 153862384 -49223148 + (T)n Simple_repeat Simple_repeat 1 20 0 2306 71 0 34 chr5 153863016 153863354 -49222178 + AluY SINE Alu 1 328 0 384 265 93 31 chr5 153863684 153863846 -49221686 - MIR SINE MIR -71 191 20 304 322 102 11 chr5 153864053 153864230 -49221302 - MIR SINE MIR -21 241 49 293 232 88 32 chr5 153864804 153864929 -49220603 - L1ME4a LINE L1 0 6121 5990 273 274 69 0 chr5 153865497 153865599 -49219933 + MIR SINE MIR 60 168 -94 772 233 29 6 chr5 153865616 153865788 -49219744 - MLT1C LTR MaLR 0 467 292 579 256 102 39 chr5 153865936 153866190 -49219342 - MLT1C LTR MaLR -156 311 42 2888 263 86 26 chr5 153866504 153867636 -49217896 + MER69B DNA AcHobo 2 1226 0 211 271 0 0 chr5 153867788 153867836 -49217696 + MIR SINE MIR 100 147 -115 281 200 29 14 chr5 153868721 153868791 -49216741 + MIR SINE MIR 178 248 -14 1550 219 121 31 chr5 153869008 153869488 -49216044 + LTR33A LTR ERVL 1 523 0 448 187 82 64 chr5 153869656 153869827 -49215705 + L1ME4a LINE L1 5948 6121 0 371 294 106 17 chr5 153870387 153870567 -49214965 + MIR SINE MIR 49 244 -18 497 259 70 35 chr5 153870769 153870970 -49214562 + MIR SINE MIR 21 228 -34 281 277 0 0 chr5 153872094 153872159 -49213373 - MER5B DNA MER1_type -3 175 111 608 235 132 21 chr5 153872402 153872683 -49212849 - L1ME4a LINE L1 -44 6077 5766 282 301 41 8 chr5 153875205 153875328 -49210204 + MIR SINE MIR 106 232 -30 233 308 77 0 chr5 153876386 153876503 -49209029 + L2 LINE L2 3138 3263 -9 309 316 83 18 chr5 153876532 153876700 -49208832 - MER5A DNA MER1_type -3 186 8 964 248 96 28 chr5 153876743 153877066 -49208466 - MLT1A1 LTR MaLR -19 346 2 473 342 31 60 chr5 153880308 153880390 -49205142 + L1M3c LINE L1 174 257 -6046 2922 7 0 0 chr5 153880390 153880698 -49204834 + AluYb8 SINE Alu 1 308 -10 473 342 31 60 chr5 153880698 153881049 -49204483 + L1M3c LINE L1 257 1090 -5213 433 304 12 41 chr5 153881122 153881293 -49204239 + L1MB1 LINE L1 651 816 -5487 2574 250 78 55 chr5 153881444 153882319 -49203213 + L1MB1 LINE L1 777 1630 -4752 1861 133 37 13 chr5 153882319 153882619 -49202913 + AluSg SINE Alu 1 307 -3 2574 250 78 55 chr5 153882619 153882823 -49202709 + L1MB1 LINE L1 1630 1828 -4554 1502 160 24 8 chr5 153882823 153883073 -49202459 + AluJo SINE Alu 45 298 -14 2574 250 78 55 chr5 153883073 153883502 -49202030 + L1MB1 LINE L1 1828 2246 -4136 1606 182 92 53 chr5 153883502 153883881 -49201651 - MSTD LTR MaLR -2 394 1 2574 250 78 55 chr5 153883881 153884268 -49201264 + L1MB1 LINE L1 2246 2741 -3641 4012 185 43 26 chr5 153884274 153884888 -49200644 + L1MB1 LINE L1 5445 6083 -321 2054 152 0 0 chr5 153884888 153885191 -49200341 + AluSx SINE Alu 1 303 -9 4012 185 43 26 chr5 153885191 153885514 -49200018 + L1MB1 LINE L1 6083 6399 -5 723 299 86 25 chr5 153886301 153886662 -49198870 - L2 LINE L2 -6 3307 2925 268 330 21 0 chr5 153886695 153886789 -49198743 - L1M4 LINE L1 -606 5572 5477 207 0 0 0 chr5 153887723 153887746 -49197786 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 258 281 112 3 chr5 153887824 153888006 -49197526 + MIR SINE MIR 8 261 -1 369 287 18 7 chr5 153888364 153888502 -49197030 + MIR SINE MIR 57 196 -66 579 311 5 5 chr5 153889333 153889529 -49196003 - MIR SINE MIR -27 235 40 1746 163 131 99 chr5 153889681 153890185 -49195347 + MLT2B1 LTR ERVL 1 520 0 182 200 0 20 chr5 153891324 153891374 -49194158 - L2 LINE L2 0 3313 3265 442 298 91 35 chr5 153891581 153891783 -49193749 - MIR SINE MIR -12 250 38 191 365 27 0 chr5 153891957 153892031 -49193501 + MIR3 SINE MIR 109 184 -24 2500 154 34 5 chr5 153892173 153892583 -49192949 - MSTB LTR MaLR -4 422 1 327 50 0 0 chr5 153893451 153893491 -49192041 - U2 snRNA snRNA -147 41 2 300 259 187 14 chr5 153893732 153893871 -49191661 + MER5A DNA MER1_type 13 175 -14 641 283 94 18 chr5 153895663 153895939 -49189593 + L1ME1 LINE L1 5866 6162 -4 508 240 53 13 chr5 153896067 153896217 -49189315 + L1ME4a LINE L1 5961 6116 -5 453 229 0 57 chr5 153897699 153897821 -49187711 + L2 LINE L2 3153 3267 -5 360 336 57 29 chr5 153898582 153898722 -49186810 + MIR3 SINE MIR 2 145 -63 7429 23 6 0 chr5 153898748 153899605 -49185927 - L1PA4 LINE L1 0 6155 5294 920 294 117 36 chr5 153899897 153900417 -49185115 + MLT1K LTR MaLR 27 588 0 474 231 75 27 chr5 153901125 153901272 -49184260 + MIR SINE MIR 39 192 -70 2128 131 0 0 chr5 153901324 153901629 -49183903 + AluSx SINE Alu 1 305 -7 287 284 38 30 chr5 153901630 153901747 -49183785 - MIR SINE MIR -83 125 9 401 284 29 0 chr5 153902333 153902435 -49183097 - L2 LINE L2 0 3272 3168 280 222 0 14 chr5 153902661 153902733 -49182799 + MER103 DNA DNA 48 118 -48 1187 206 5 5 chr5 153905200 153905419 -49180113 + MER20 DNA MER1_type 1 219 0 264 295 82 25 chr5 153905427 153905549 -49179983 - MER5A DNA MER1_type 0 189 61 238 140 80 0 chr5 153905913 153905963 -49179569 - MIR3 SINE MIR -18 190 137 303 263 105 23 chr5 153906190 153906323 -49179209 - MER5A DNA MER1_type 0 189 46 270 314 103 14 chr5 153906660 153906840 -49178692 - MIR SINE MIR -65 143 2 1780 111 56 7 chr5 153908173 153908485 -49177047 + AluSx SINE Alu 1 325 0 442 232 184 0 chr5 153908656 153908781 -49176751 - MER5A DNA MER1_type -29 160 13 417 256 33 8 chr5 153908792 153908913 -49176619 + L2 LINE L2 3149 3272 0 2334 137 61 59 chr5 153910229 153910690 -49174842 - MLT1C LTR MaLR -4 463 2 240 220 101 28 chr5 153910932 153911041 -49174491 - L2 LINE L2 -1231 2083 1967 1205 213 47 56 chr5 153911046 153911365 -49174167 - MLT1H1 LTR MaLR 0 555 240 376 177 0 0 chr5 153911448 153911510 -49174022 - MER45 DNA AcHobo -15 1566 1505 243 170 0 0 chr5 153911521 153911568 -49173964 + (TG)n Simple_repeat Simple_repeat 2 48 0 196 337 99 0 chr5 153911993 153912094 -49173438 + MIR SINE MIR 68 178 -84 394 239 88 9 chr5 153912735 153912848 -49172684 + MIR SINE MIR 20 141 -121 185 271 0 12 chr5 153913344 153913429 -49172103 + GA-rich Low_complexity Low_complexity 3 86 0 1619 183 0 3 chr5 153913823 153914108 -49171424 + AluJo SINE Alu 1 284 -28 24 0 0 0 chr5 153914118 153914142 -49171390 + AT_rich Low_complexity Low_complexity 1 24 0 492 248 35 28 chr5 153915417 153915562 -49169970 + L2 LINE L2 3163 3308 -5 270 275 28 137 chr5 153915577 153915623 -49169909 + MIR SINE MIR 68 117 -145 1823 148 3 10 chr5 153915623 153915926 -49169606 - AluSg SINE Alu -9 301 1 270 275 28 137 chr5 153915926 153915942 -49169590 + MIR SINE MIR 117 133 -129 1725 151 15 4 chr5 153915942 153916214 -49169318 - AluJo SINE Alu -37 275 1 270 275 28 137 chr5 153916214 153916332 -49169200 + MIR SINE MIR 133 229 -33 1759 145 10 7 chr5 153917233 153917522 -49168010 + AluSx SINE Alu 1 290 -22 423 0 0 0 chr5 153917524 153917571 -49167961 + (TA)n Simple_repeat Simple_repeat 2 48 0 * 504 0 0 0 chr5 153917570 153917626 -49167906 + (GA)n Simple_repeat Simple_repeat 2 57 0 266 370 97 13 chr5 153917984 153918138 -49167394 - L2 LINE L2 -1 3271 3105 249 276 16 79 chr5 153918217 153918344 -49167188 - L2 LINE L2 -173 3099 2981 530 201 19 13 chr5 153919140 153919299 -49166233 + GA-rich Low_complexity Low_complexity 3 162 0 236 147 0 0 chr5 153919300 153919334 -49166198 + (AGGGGG)n Simple_repeat Simple_repeat 5 38 0 310 258 91 38 chr5 153920221 153920353 -49165179 - MIR SINE MIR 0 262 124 1968 164 22 30 chr5 153921672 153922038 -49163494 + MLT1A2 LTR MaLR 1 363 -11 524 261 37 22 chr5 153922068 153922202 -49163330 + L2 LINE L2 3137 3272 0 445 225 186 35 chr5 153922237 153922468 -49163064 + L1ME4a LINE L1 5814 6079 -42 2243 88 3 0 chr5 153923080 153923377 -49162155 - AluY SINE Alu -13 298 1 987 208 69 5 chr5 153923378 153923580 -49161952 - MER58A DNA MER1_type -9 215 1 402 258 264 18 chr5 153923580 153923747 -49161785 - MIR SINE MIR -24 238 31 247 358 73 0 chr5 153923807 153923916 -49161616 - L2 LINE L2 -2 3270 3154 402 281 128 24 chr5 153924210 153924374 -49161158 + MIR SINE MIR 1 181 -81 254 284 162 0 chr5 153924388 153924462 -49161070 + L2 LINE L2 3168 3253 -19 478 276 166 11 chr5 153925505 153925686 -49159846 + MIR SINE MIR 3 211 -51 189 256 256 11 chr5 153925722 153925812 -49159720 + L2 LINE L2 3137 3248 -24 506 312 131 14 chr5 153927075 153927296 -49158236 - MIR SINE MIR 0 262 16 275 320 111 23 chr5 153929096 153929268 -49156264 - L2 LINE L2 -156 3116 2930 1867 188 21 19 chr5 153930348 153930721 -49154811 - MLT1A2 LTR MaLR 0 374 1 573 350 77 4 chr5 153931925 153932159 -49153373 + MIR SINE MIR 9 259 -3 210 171 24 0 chr5 153932480 153932521 -49153011 + (ATG)n Simple_repeat Simple_repeat 2 43 0 368 249 177 48 chr5 153932532 153932646 -49152886 - MIR SINE MIR -19 243 145 1049 178 122 53 chr5 153932646 153932949 -49152583 - MER33 DNA MER1_type 0 324 1 368 249 177 48 chr5 153932949 153933043 -49152489 - MIR SINE MIR -117 145 8 1201 193 116 4 chr5 153933706 153933965 -49151567 + MSTD LTR MaLR 109 396 0 323 295 43 2 chr5 153934532 153934648 -49150884 + MIR SINE MIR 25 153 -69 * 398 178 168 9 chr5 153934646 153934753 -49150779 - L2 LINE L2 0 3313 3190 240 196 98 0 chr5 153934791 153934842 -49150690 + MIR SINE MIR 150 205 -57 374 285 120 70 chr5 153935472 153935672 -49149860 - MIR SINE MIR -51 211 2 1288 234 47 31 chr5 153935897 153936345 -49149187 + L1ME3 LINE L1 5706 6160 -2 364 257 9 9 chr5 153937533 153937638 -49147894 + L1ME4a LINE L1 5947 6051 -70 2264 82 13 0 chr5 153938692 153938995 -49146537 - AluSp SINE Alu -6 307 1 227 216 62 62 chr5 153939401 153939498 -49146034 + L1M3e LINE L1 751 847 -6183 1556 184 195 3 chr5 153941195 153941554 -49143978 - MSTA LTR MaLR 0 428 1 237 88 0 0 chr5 153941554 153941588 -49143944 - MSTA-int LTR MaLR 0 1580 1547 9348 133 34 36 chr5 153941638 153943183 -49142349 - MSTA-int LTR MaLR -35 1545 3 1951 133 177 11 chr5 153943185 153943552 -49141980 - MSTA LTR MaLR 0 428 1 529 268 44 88 chr5 153943800 153944050 -49141482 + MIR SINE MIR 12 250 -12 366 183 0 0 chr5 153945259 153945330 -49140202 + (CATA)n Simple_repeat Simple_repeat 2 72 0 315 191 48 24 chr5 153945263 153945347 -49140185 - L1MC4 LINE L1 -1341 6981 1978 * 952 183 33 117 chr5 153945351 153945735 -49139797 - MLT1C LTR MaLR -81 386 7 214 300 40 30 chr5 153945753 153945853 -49139679 + MIR SINE MIR 161 261 -1 224 405 15 8 chr5 153946041 153946172 -49139360 + MIR SINE MIR 17 148 -114 1079 184 34 0 chr5 153946583 153946762 -49138770 - MER58A DNA MER1_type 0 224 40 2892 218 62 15 chr5 153946762 153948641 -49136891 + L1MC1 LINE L1 4270 6333 0 221 232 71 0 chr5 153948731 153948787 -49136745 - MIR SINE MIR -115 93 34 3641 78 17 0 chr5 153951658 153952119 -49133413 - L1PA8 LINE L1 -17 6155 5687 659 262 114 0 chr5 153953272 153953482 -49132050 + MIR SINE MIR 17 250 -12 367 257 215 62 chr5 153953906 153954245 -49131287 + MLT1H LTR MaLR 5 395 -154 258 354 10 10 chr5 153954498 153954597 -49130935 + L2 LINE L2 3174 3272 0 305 219 84 34 chr5 153954636 153954755 -49130777 + L1ME4a LINE L1 5986 6110 -11 181 280 120 90 chr5 153955148 153955248 -49130284 - MIR SINE MIR -67 141 39 194 392 0 31 chr5 153955342 153955439 -49130093 + L2 LINE L2 3174 3267 -5 253 306 18 36 chr5 153955726 153955837 -49129695 - MIR SINE MIR -81 127 19 329 321 57 14 chr5 153957408 153957548 -49127984 - MIR SINE MIR -43 219 74 347 316 10 0 chr5 153957758 153957856 -49127676 - MIR SINE MIR -80 128 30 466 250 132 13 chr5 153958375 153958527 -49127005 + MIR SINE MIR 5 174 -88 230 329 57 0 chr5 153958540 153958610 -49126922 + L2 LINE L2 2981 3054 -218 233 373 0 0 chr5 153958615 153958690 -49126842 + L2 LINE L2 3195 3269 -3 360 0 0 0 chr5 153960115 153960155 -49125377 + (TTG)n Simple_repeat Simple_repeat 3 42 0 519 226 0 0 chr5 153960159 153960261 -49125271 - L1MA10 LINE L1 -12 6322 6221 28 71 0 0 chr5 153960483 153960539 -49124993 + AT_rich Low_complexity Low_complexity 1 56 0 535 233 79 106 chr5 153962068 153962201 -49123331 - MIR SINE MIR 0 262 134 1658 158 3 80 chr5 153962201 153962512 -49123020 + AluJo SINE Alu 5 291 -21 535 233 79 106 chr5 153962512 153962567 -49122965 - MIR SINE MIR -128 134 79 352 319 86 25 chr5 153963687 153963850 -49121682 - MIR3 SINE MIR -22 186 14 1017 248 100 60 chr5 153964111 153964843 -49120689 - L2 LINE L2 -7 3306 2561 649 261 47 115 chr5 153964890 153965171 -49120361 - MER102b DNA MER1_type -1089 339 87 2138 95 7 36 chr5 153965171 153965476 -49120056 - AluSg SINE Alu -14 296 1 649 261 47 115 chr5 153965476 153965558 -49119974 - MER102b DNA MER1_type -1341 87 1 325 308 0 0 chr5 153967362 153967453 -49118079 - MIR SINE MIR -20 242 152 586 277 44 8 chr5 153967454 153967645 -49117887 + MIR SINE MIR 22 212 -50 336 239 185 15 chr5 153967675 153967805 -49117727 - MIR SINE MIR -66 142 10 464 342 37 8 chr5 153968567 153968852 -49116680 + L2 LINE L2 2699 2997 -275 308 294 16 63 chr5 153968866 153968992 -49116540 + L2 LINE L2 3136 3255 -58 413 298 0 0 chr5 153969574 153969698 -49115834 + MIR SINE MIR 60 183 -79 500 206 215 96 chr5 153970195 153970404 -49115128 + MIR SINE MIR 3 236 -26 366 323 169 24 chr5 153971819 153972361 -49113171 - L2 LINE L2 -20 3252 2634 * 388 237 45 28 chr5 153972341 153972499 -49113033 + MIR SINE MIR 30 182 -62 232 287 138 0 chr5 153973818 153973905 -49111627 - MIR SINE MIR -38 224 126 1177 238 51 47 chr5 153976670 153977158 -49108374 + L1MEc LINE L1 1319 1808 -4588 1137 189 43 153 chr5 153977431 153978091 -49107441 - L1ME LINE L1 -567 5597 4993 180 77 0 0 chr5 153978092 153978118 -49107414 + (T)n Simple_repeat Simple_repeat 1 26 0 1070 194 40 82 chr5 153978133 153978510 -49107022 - L1ME2 LINE L1 -9 6155 5795 31955 41 6 0 chr5 153978563 153983202 -49102330 - L1PA4 LINE L1 0 6155 1493 6808 18 0 0 chr5 153983302 153984255 -49101277 - L1PA2 LINE L1 -138 6017 5065 389 280 36 88 chr5 153984366 153984559 -49100973 + MER5A DNA MER1_type 7 189 0 2199 65 7 36 chr5 153986702 153987009 -49098523 - AluY SINE Alu -13 298 1 487 203 78 20 chr5 153987121 153987274 -49098258 - L1ME4a LINE L1 -6 6115 5954 391 314 49 25 chr5 153987350 153987595 -49097937 - L1ME4a LINE L1 -343 5778 5528 279 269 92 23 chr5 153987706 153987836 -49097696 - L1ME4a LINE L1 -216 5905 5767 1979 128 3 10 chr5 153988081 153988371 -49097161 + AluSx SINE Alu 1 288 -24 22 0 0 0 chr5 153988481 153988503 -49097029 + AT_rich Low_complexity Low_complexity 1 22 0 457 280 112 29 chr5 153988638 153988831 -49096701 - L1ME4a LINE L1 -1311 4835 4659 186 43 0 0 chr5 153988831 153988854 -49096678 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 457 280 112 29 chr5 153988854 153989071 -49096461 - L1ME4a LINE L1 -1487 4659 4391 839 118 90 14 chr5 153989602 153989746 -49095786 - L1MB8 LINE L1 0 6178 6024 243 57 132 19 chr5 153989748 153989801 -49095731 - L1MB3 LINE L1 0 6183 6125 1924 185 21 32 chr5 153989805 153990321 -49095211 - L1MB2 LINE L1 -4 6287 5803 242 277 45 96 chr5 153990375 153990595 -49094937 - L2 LINE L2 -652 2662 2454 198 0 0 0 chr5 153990857 153990879 -49094653 + (CA)n Simple_repeat Simple_repeat 1 22 0 448 250 162 0 chr5 153991186 153991322 -49094210 + MIR SINE MIR 21 178 -84 346 306 18 9 chr5 153991439 153991550 -49093982 + MIR SINE MIR 30 141 -67 2344 257 67 55 chr5 153991552 153992556 -49092976 + HAL1 LINE L1 189 1204 -1303 21 36 0 0 chr5 153992914 153992942 -49092590 + AT_rich Low_complexity Low_complexity 1 28 0 194 222 309 12 chr5 153993567 153993648 -49091884 + MIR3 SINE MIR 98 202 -6 24978 55 4 2 chr5 153994699 153998418 -49087114 - L1P LINE L1 -2403 3743 13 936 159 9 79 chr5 153998432 153998595 -49086937 - L1M4 LINE L1 -1142 5004 4860 1700 201 0 3 chr5 153998595 153998894 -49086638 + AluJo SINE Alu 1 298 -14 936 159 9 79 chr5 153998894 153998957 -49086575 - L1M4 LINE L1 -1286 4860 4794 2212 177 88 40 chr5 153998958 153999483 -49086049 + L1ME1 LINE L1 5613 6162 -4 189 0 0 0 chr5 154000466 154000487 -49085045 + (A)n Simple_repeat Simple_repeat 1 21 0 207 303 156 9 chr5 154000556 154000665 -49084867 + MIR SINE MIR 48 172 -90 582 271 112 23 chr5 154001400 154001712 -49083820 + MLT1I LTR MaLR 1 302 -107 2436 83 0 0 chr5 154002130 154002430 -49083102 + AluY SINE Alu 1 300 -11 551 363 58 11 chr5 154003243 154003712 -49081820 + L2 LINE L2 2443 2933 -381 397 288 17 64 chr5 154003845 154004081 -49081451 + L2 LINE L2 3072 3296 -17 235 305 38 29 chr5 154004119 154004224 -49081308 - MIR SINE MIR -73 135 30 301 247 82 0 chr5 154004951 154005048 -49080484 - L2 LINE L2 -18 3295 3191 307 307 147 39 chr5 154005402 154005757 -49079775 + MLT1L LTR MaLR 205 597 -18 510 299 10 39 chr5 154005784 154005970 -49079562 + MIR SINE MIR 15 196 -66 2839 137 20 11 chr5 154005970 154006423 -49079109 + MSTB2 LTR MaLR 1 457 0 510 299 10 39 chr5 154006423 154006440 -49079092 + MIR SINE MIR 196 212 -50 773 102 30 78 chr5 154006462 154006636 -49078896 + L1M3 LINE L1 5345 5514 -641 381 195 115 9 chr5 154007417 154007530 -49078002 + L2 LINE L2 3134 3258 -14 192 97 0 0 chr5 154007530 154007561 -49077971 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 756 325 145 23 chr5 154007911 154008759 -49076773 + L2 LINE L2 1736 2479 -834 3637 92 19 0 chr5 154008759 154009280 -49076252 - L1MA2 LINE L1 -4 6300 5770 756 325 145 23 chr5 154009280 154009836 -49075696 + L2 LINE L2 2479 3312 -1 341 305 129 31 chr5 154010586 154011074 -49074458 + L2 LINE L2 2243 2778 -536 248 269 71 64 chr5 154011350 154011491 -49074041 + L2 LINE L2 3172 3313 0 441 0 0 0 chr5 154011868 154011917 -49073615 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 311 67 44 chr5 154012148 154012328 -49073204 - MIR SINE MIR -19 243 60 204 40 0 0 chr5 154013190 154013215 -49072317 + (TTA)n Simple_repeat Simple_repeat 2 26 0 4733 143 38 26 chr5 154013215 154014033 -49071499 - L1MB1 LINE L1 -7 6161 5334 2464 151 38 14 chr5 154014033 154014449 -49071083 + L1PB4 LINE L1 5710 6144 -12 186 209 139 0 chr5 154014517 154014560 -49070972 - MIR3 SINE MIR -51 157 109 472 297 40 6 chr5 154015065 154015240 -49070292 + MIR SINE MIR 74 254 -8 1822 126 83 4 chr5 154015543 154015820 -49069712 + AluSx SINE Alu 14 312 0 249 160 53 0 chr5 154015831 154015900 -49069632 + L1ME4a LINE L1 5304 5375 -795 824 289 76 25 chr5 154015913 154016348 -49069184 + L1ME4a LINE L1 5419 5884 -237 721 229 139 31 chr5 154016368 154016626 -49068906 - LTR16A1 LTR ERVL -15 442 157 960 325 51 14 chr5 154016637 154017238 -49068294 - ERVL LTR ERVL -945 4819 4145 1067 215 30 92 chr5 154017244 154017542 -49067990 + L1MC4a LINE L1 6609 6845 -963 3069 158 29 9 chr5 154017542 154018098 -49067434 + L1MC1 LINE L1 5764 6330 -3 1067 215 30 92 chr5 154018098 154018168 -49067364 + L1MC4a LINE L1 6845 6918 -890 3277 203 76 9 chr5 154018458 154019223 -49066309 + L1MC4a LINE L1 6993 7808 0 881 307 62 7 chr5 154019828 154020118 -49065414 + MLT1K LTR MaLR 15 320 -268 575 294 35 25 chr5 154020653 154020886 -49064646 + MIR SINE MIR 21 254 -8 250 325 37 48 chr5 154021611 154021882 -49063650 + L2 LINE L2 2036 2303 -1011 383 174 0 14 chr5 154022251 154022320 -49063212 + MER94 DNA DNA 27 94 -40 287 305 0 0 chr5 154024296 154024391 -49061141 + MIR3 SINE MIR 102 196 -12 2622 151 25 10 chr5 154024950 154025434 -49060098 - L1MB2 LINE L1 0 6171 5681 25 0 0 50 chr5 154026254 154026271 -49059261 + AT_rich Low_complexity Low_complexity 1 17 -21 2227 117 0 0 chr5 154026271 154026562 -49058970 + AluSq SINE Alu 1 291 -22 25 0 0 50 chr5 154026562 154026584 -49058948 + AT_rich Low_complexity Low_complexity 17 38 0 259 132 0 0 chr5 154027845 154027883 -49057649 + MIR SINE MIR 109 146 -62 1651 169 79 3 chr5 154027911 154028032 -49057500 + AluJo SINE Alu 1 111 -260 189 0 0 0 chr5 154028032 154028053 -49057479 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1651 169 79 3 chr5 154028053 154028280 -49057252 + AluJo SINE Alu 111 371 0 867 175 106 0 chr5 154028801 154028961 -49056571 + MER45A DNA AcHobo 1 177 -1 1112 169 67 22 chr5 154030210 154030435 -49055097 - MER46A DNA MER2_type -1 235 1 182 294 20 0 chr5 154031080 154031131 -49054401 + L2 LINE L2 3122 3173 -99 212 274 0 55 chr5 154033555 154033628 -49051904 - MIR SINE MIR -58 150 82 1707 158 32 28 chr5 154034056 154034340 -49051192 + AluJo SINE Alu 3 287 -25 184 213 33 0 chr5 154034341 154034402 -49051130 + GA-rich Low_complexity Low_complexity 1 63 0 215 324 88 0 chr5 154034877 154034979 -49050553 - L2 LINE L2 0 3313 3203 245 345 43 17 chr5 154035947 154036063 -49049469 - L2 LINE L2 -2 3270 3152 239 131 0 98 chr5 154036666 154036727 -49048805 + L1ME4a LINE L1 6067 6121 0 616 266 118 33 chr5 154039001 154039510 -49046022 + L2 LINE L2 2758 3312 -1 194 348 106 12 chr5 154040058 154040219 -49045313 - MIR SINE MIR -50 212 37 728 266 77 17 chr5 154040656 154040889 -49044643 + MIR SINE MIR 15 261 -1 328 349 6 24 chr5 154041128 154041294 -49044238 - L2 LINE L2 -458 2856 2694 1091 54 134 0 chr5 154041343 154041492 -49044040 + L1M1 LINE L1 5632 5800 -504 1087 148 5 58 chr5 154041604 154041660 -49043872 + L1MA2 LINE L1 6094 6151 -153 2020 157 3 0 chr5 154041660 154041965 -49043567 + AluSg SINE Alu 1 306 -4 1087 148 5 58 chr5 154041965 154042008 -49043524 + L1MA2 LINE L1 6151 6195 -109 1744 166 3 14 chr5 154042008 154042320 -49043212 + AluJb SINE Alu 1 309 0 1087 148 5 58 chr5 154042320 154042441 -49043091 + L1MA2 LINE L1 6195 6304 0 22 0 0 0 chr5 154042441 154042463 -49043069 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 154042575 154042596 -49042936 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 451 356 38 26 chr5 154042616 154043040 -49042492 - L2 LINE L2 -871 2443 2015 479 285 40 0 chr5 154044570 154044721 -49040811 + MIR SINE MIR 87 243 -19 1825 240 32 66 chr5 154044763 154045346 -49040186 - MLT1E LTR MaLR 0 593 1 424 298 91 47 chr5 154045390 154045776 -49039756 - L2 LINE L2 -1 3312 2910 420 210 89 16 chr5 154047484 154047608 -49037924 + MER103 DNA DNA 3 135 -31 500 271 20 86 chr5 154048829 154049073 -49036459 + MIR SINE MIR 35 262 0 212 136 45 0 chr5 154049282 154049326 -49036206 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 378 239 33 11 chr5 154049359 154049451 -49036081 + MIR SINE MIR 121 214 -48 1178 290 45 15 chr5 154050365 154050765 -49034767 + L1MC4a LINE L1 5415 5826 -1982 * 4245 256 109 59 chr5 154050744 154051810 -49033722 + L1MC4a LINE L1 5276 6288 -1520 2286 141 48 10 chr5 154051810 154052206 -49033326 + L1PB1 LINE L1 5741 6151 0 4245 256 109 59 chr5 154052206 154053261 -49032271 + L1MC4a LINE L1 6288 7502 -306 1692 157 36 4 chr5 154053540 154053845 -49031687 - AluJo SINE Alu 0 314 1 1243 106 28 0 chr5 154054089 154054268 -49031264 - L1PA13 LINE L1 0 6163 5980 2046 147 0 0 chr5 154054695 154054987 -49030545 + AluSx SINE Alu 1 292 -20 516 246 134 46 chr5 154055013 154055318 -49030214 + L1ME4a LINE L1 5621 5952 -169 228 360 79 7 chr5 154055998 154056137 -49029395 + MIR SINE MIR 2 150 -112 213 250 19 0 chr5 154056268 154056320 -49029212 + MIR SINE MIR 210 262 0 692 278 91 45 chr5 154057534 154057886 -49027646 + MLT1I LTR MaLR 40 407 -2 405 0 0 0 chr5 154058352 154058397 -49027135 + (CA)n Simple_repeat Simple_repeat 1 45 0 216 158 0 0 chr5 154058936 154058974 -49026558 + GA-rich Low_complexity Low_complexity 2 39 0 2217 125 10 0 chr5 154061102 154061406 -49024126 + AluSq SINE Alu 1 307 -6 496 105 12 12 chr5 154061486 154061572 -49023960 + L2 LINE L2 3191 3276 -37 929 161 98 29 chr5 154061667 154061872 -49023660 - MER20 DNA MER1_type 0 219 1 426 300 56 28 chr5 154062717 154063004 -49022528 + L1ME4a LINE L1 5621 5915 -206 1493 220 170 29 chr5 154063445 154064005 -49021527 + L1ME3A LINE L1 5523 6161 -9 322 290 10 10 chr5 154064488 154064588 -49020944 + L2 LINE L2 3209 3308 -5 189 0 0 0 chr5 154065333 154065354 -49020178 + (A)n Simple_repeat Simple_repeat 1 21 0 286 299 18 102 chr5 154066045 154066094 -49019438 + MER5A DNA MER1_type 7 59 -130 2289 105 0 3 chr5 154066094 154066390 -49019142 + AluSx SINE Alu 1 295 -17 286 299 18 102 chr5 154066390 154066507 -49019025 + MER5A DNA MER1_type 59 159 -30 358 299 101 96 chr5 154067774 154068129 -49017403 + L2 LINE L2 2903 3259 -13 279 256 0 13 chr5 154069963 154070041 -49015491 - MIR SINE MIR -29 233 157 418 330 27 36 chr5 154070321 154070542 -49014990 + MLT1K LTR MaLR 354 572 -16 268 246 31 0 chr5 154070900 154070965 -49014567 + HsTC2 DNA Tc2 1831 1897 -1 527 272 199 0 chr5 154072329 154072535 -49012997 + MIR SINE MIR 14 260 -2 223 259 172 43 chr5 154072651 154072767 -49012765 + L2 LINE L2 3182 3312 -1 343 344 6 13 chr5 154074082 154074239 -49011293 + MER5A DNA MER1_type 34 189 0 243 0 0 0 chr5 154075799 154075826 -49009706 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 0 0 0 chr5 154076226 154076261 -49009271 + (CA)n Simple_repeat Simple_repeat 1 35 0 7540 43 0 0 chr5 154127404 154128704 -48956828 + L1PA5 LINE L1 4854 6153 -1 6412 159 31 6 chr5 154128704 154130017 -48955515 + L1MC1 LINE L1 4985 6328 -5 307 254 0 0 chr5 154130020 154130083 -48955449 - MER81 DNA DNA -51 63 1 304 196 196 75 chr5 154130914 154131047 -48954485 - MER5A DNA MER1_type -6 183 35 1164 213 92 75 chr5 154131188 154131643 -48953889 + L2 LINE L2 2198 2660 -654 707 232 79 44 chr5 154131652 154131955 -48953577 + MLT1D LTR MaLR 15 334 -133 1261 177 45 103 chr5 154131956 154132346 -48953186 + MLT2D LTR ERVL 1 368 -41 246 105 0 0 chr5 154132346 154132384 -48953148 + (TG)n Simple_repeat Simple_repeat 2 39 0 1797 144 99 3 chr5 154132420 154132732 -48952800 - MER47A DNA MER2_type -23 343 2 400 62 0 0 chr5 154132764 154132812 -48952720 + MLT2D LTR ERVL 367 414 0 * 606 204 36 15 chr5 154132812 154132946 -48952586 + MLT1D LTR MaLR 331 467 0 883 246 107 12 chr5 154132949 154133297 -48952235 + L2 LINE L2 2659 3038 -275 266 200 40 27 chr5 154133323 154133398 -48952134 - MLT1D LTR MaLR -414 91 16 394 273 28 0 chr5 154133433 154133576 -48951956 - L2 LINE L2 -792 2522 2376 219 219 0 47 chr5 154133596 154133660 -48951872 - L2 LINE L2 -257 3056 2996 553 286 0 48 chr5 154133702 154133908 -48951624 + L2 LINE L2 3101 3296 -17 288 0 0 0 chr5 154133908 154133940 -48951592 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 40536 58 3 55 chr5 154133996 154135877 -48949655 + L1PA5 LINE L1 1 1977 -4177 6816 65 16 54 chr5 154135877 154137161 -48948371 - SVA Other Other -551 1381 433 40536 58 3 55 chr5 154137161 154137178 -48948354 + L1PA5 LINE L1 1977 1993 -4161 6218 51 1 101 chr5 154137178 154138140 -48947392 - SVA Other Other -520 866 1 40536 58 3 55 chr5 154138140 154142431 -48943101 + L1PA5 LINE L1 1993 6147 -7 830 223 69 6 chr5 154142988 154143163 -48942369 - MER58A DNA MER1_type -2 222 37 688 313 114 22 chr5 154143188 154143811 -48941721 - L3 LINE CR1 -272 1305 626 263 233 41 0 chr5 154146303 154146376 -48939156 - MIR SINE MIR -3 259 184 1775 94 109 0 chr5 154146907 154147173 -48938359 - L1PB1 LINE L1 0 6151 5857 11352 83 6 9 chr5 154147172 154148267 -48937265 + L1PA7 LINE L1 2501 3598 -2556 7506 41 1 1 chr5 154148267 154149544 -48935988 + L1PA5 LINE L1 4878 6154 0 11352 83 6 9 chr5 154149544 154152011 -48933521 + L1PA7 LINE L1 3598 6154 0 4313 118 14 9 chr5 154152017 154152790 -48932742 - L1PB1 LINE L1 -278 5873 5100 5954 182 7 11 chr5 154152799 154153981 -48931551 + L1PB1 LINE L1 3917 5093 -1053 247 224 40 40 chr5 154154480 154154556 -48930976 + L1P5 LINE L1 5485 5560 -591 565 203 44 32 chr5 154154590 154154607 -48930925 - L1MA10 LINE L1 0 6334 6318 2439 219 53 24 chr5 154154607 154155228 -48930304 - L1ME1 LINE L1 -5 6161 5523 21 0 0 0 chr5 154155342 154155363 -48930169 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 154155508 154155538 -48929994 + AT_rich Low_complexity Low_complexity 1 30 0 1779 78 22 4 chr5 154155701 154155931 -48929601 - AluSg1 SINE Alu -16 293 60 2152 134 0 0 chr5 154155951 154156243 -48929289 - AluSx SINE Alu -14 298 7 2449 60 0 53 chr5 154156253 154156572 -48928960 - AluY SINE Alu -9 302 1 1964 100 11 0 chr5 154157177 154157458 -48928074 + L1MA2 LINE L1 6021 6304 0 25 31 0 0 chr5 154157458 154157490 -48928042 + AT_rich Low_complexity Low_complexity 1 32 0 347 145 14 0 chr5 154158089 154158158 -48927374 + GA-rich Low_complexity Low_complexity 1 70 0 2390 102 0 0 chr5 154158587 154158890 -48926642 + AluSx SINE Alu 5 307 -5 1857 164 35 38 chr5 154159527 154159893 -48925639 - MLT1A1 LTR MaLR 0 365 1 255 276 69 0 chr5 154160050 154160137 -48925395 - MIR SINE MIR -52 210 118 225 0 0 0 chr5 154160443 154160468 -48925064 + (GA)n Simple_repeat Simple_repeat 1 25 0 207 365 0 0 chr5 154160935 154160998 -48924534 - L2 LINE L2 -93 3179 3117 529 227 95 89 chr5 154161016 154161364 -48924168 + L1ME4a LINE L1 5742 6091 -30 2316 120 0 0 chr5 154161706 154162014 -48923518 - AluSg SINE Alu -2 308 1 246 338 23 60 chr5 154162185 154162318 -48923214 - L2 LINE L2 0 3272 3145 615 284 78 5 chr5 154162338 154162556 -48922976 + MIR SINE MIR 29 262 0 361 288 175 45 chr5 154163861 154163915 -48921617 + L2 LINE L2 2841 2887 -385 2235 103 7 7 chr5 154163915 154164207 -48921325 - AluSx SINE Alu -20 292 1 361 288 175 45 chr5 154164207 154164530 -48921002 + L2 LINE L2 2887 3267 -5 202 222 78 67 chr5 154165360 154165450 -48920082 + L2 LINE L2 3160 3250 -63 248 238 79 0 chr5 154165634 154165697 -48919835 - MER103 DNA DNA -96 70 3 215 239 33 43 chr5 154166175 154166267 -48919265 - MIR SINE MIR -108 154 64 355 280 112 8 chr5 154166460 154166585 -48918947 + Charlie8 DNA MER1_type 1 138 -2279 2495 73 7 0 chr5 154167703 154168004 -48917528 - AluSc SINE Alu -6 303 1 2160 137 35 30 chr5 154168759 154169132 -48916400 - THE1C LTR MaLR 0 375 1 697 215 129 114 chr5 154169320 154169571 -48915961 - L2 LINE L2 -3 3310 3047 1395 189 78 22 chr5 154169571 154169841 -48915691 + AluJo SINE Alu 1 285 -27 697 215 129 114 chr5 154169841 154170054 -48915478 - L2 LINE L2 -266 3047 2839 2200 112 0 7 chr5 154170654 154170998 -48914534 + AluSx SINE Alu 1 342 0 572 281 78 18 chr5 154171341 154171558 -48913974 + MER112 DNA MER1_type 21 250 -10 380 202 69 128 chr5 154171679 154171867 -48913665 - MER5B DNA MER1_type 0 178 2 359 207 0 27 chr5 154171931 154172042 -48913490 + (CA)n Simple_repeat Simple_repeat 2 109 0 182 333 144 9 chr5 154172134 154172245 -48913287 + L2 LINE L2 3136 3261 -11 363 268 120 21 chr5 154172250 154172392 -48913140 - MIR SINE MIR -92 170 15 289 264 85 78 chr5 154174924 154175053 -48910479 - L2 LINE L2 -4 3268 3139 2730 99 3 0 chr5 154175448 154175811 -48909721 - THE1B LTR MaLR 0 364 1 385 357 32 0 chr5 154176410 154176564 -48908968 + Tigger8 DNA MER2_type 46 204 -462 294 179 54 0 chr5 154176708 154176764 -48908768 + Tigger8 DNA MER2_type 405 463 -203 288 206 50 135 chr5 154176776 154176837 -48908695 + HAL1 LINE L1 24 68 -2439 2481 67 0 3 chr5 154176837 154177135 -48908397 - AluY SINE Alu -14 297 1 288 206 50 135 chr5 154177135 154177214 -48908318 + HAL1 LINE L1 68 152 -2355 230 364 40 10 chr5 154177301 154177400 -48908132 + Tigger8 DNA MER2_type 551 652 -14 255 320 166 31 chr5 154178486 154178933 -48906599 - L2 LINE L2 0 3313 2807 2493 93 0 0 chr5 154179521 154179833 -48905699 + AluSx SINE Alu 1 312 0 2220 122 10 0 chr5 154180743 154181047 -48904485 - AluSx SINE Alu -5 307 1 405 308 65 62 chr5 154181094 154181540 -48903992 + L2 LINE L2 2720 3169 -103 314 256 94 5 chr5 154181614 154181733 -48903799 - MIR3 SINE MIR -53 155 30 512 79 11 62 chr5 154183737 154183914 -48901618 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 39 0 0 chr5 154184305 154184331 -48901201 + (CTA)n Simple_repeat Simple_repeat 1 26 0 428 269 151 5 chr5 154184332 154184518 -48901014 - MIR SINE MIR -2 260 48 296 309 0 9 chr5 154184683 154184790 -48900742 + MIR3 SINE MIR 96 202 -6 532 263 74 11 chr5 154184869 154185044 -48900488 - MER117 DNA MER1_type -9 188 3 250 200 0 0 chr5 154185053 154185108 -48900424 - MIR SINE MIR -55 153 99 * 553 360 95 19 chr5 154185105 154185472 -48900060 - L2 LINE L2 -8 3264 2870 657 312 170 14 chr5 154185508 154185587 -48899945 - L2 LINE L2 -464 2850 2785 2345 212 70 4 chr5 154185587 154186105 -48899427 + MLT1H1 LTR MaLR 2 553 -2 657 312 170 14 chr5 154186105 154186608 -48898924 - L2 LINE L2 -529 2785 2177 484 345 61 9 chr5 154187298 154187527 -48898005 + MIR SINE MIR 20 260 -2 684 288 138 19 chr5 154187980 154188636 -48896896 - L2 LINE L2 -10 3303 2561 6370 202 38 16 chr5 154189319 154190619 -48894913 + L1MB8 LINE L1 3829 5195 -983 2091 142 0 0 chr5 154190619 154190914 -48894618 + AluJb SINE Alu 1 295 -17 6370 202 38 16 chr5 154190914 154191921 -48893611 + L1MB8 LINE L1 5195 6178 0 442 257 101 42 chr5 154191924 154192279 -48893253 + L1MEd LINE L1 1083 1497 -4813 270 258 62 62 chr5 154192404 154192532 -48893000 + MIR SINE MIR 20 147 -115 430 256 24 0 chr5 154192607 154192732 -48892800 + L1MC4a LINE L1 5815 5942 -1866 210 301 14 14 chr5 154194008 154194081 -48891451 + GA-rich Low_complexity Low_complexity 2 74 0 238 270 90 22 chr5 154195094 154195183 -48890349 - MIR SINE MIR -84 124 30 611 262 25 25 chr5 154195211 154195413 -48890119 + MIR SINE MIR 61 262 0 1150 144 0 0 chr5 154196717 154196907 -48888625 + AluSg/x SINE Alu 125 314 0 276 276 46 0 chr5 154197053 154197140 -48888392 - MIR SINE MIR -77 185 95 314 308 0 0 chr5 154197141 154197232 -48888300 + MIR3 SINE MIR 115 205 -3 740 290 9 5 chr5 154197739 154197963 -48887569 - MIR SINE MIR -25 237 13 468 284 197 38 chr5 154198350 154199039 -48886493 - L2 LINE L2 0 3313 2530 204 125 0 0 chr5 154199485 154199517 -48886015 + (T)n Simple_repeat Simple_repeat 1 32 0 1044 121 72 68 chr5 154199518 154199725 -48885807 - L1PA16 LINE L1 -1 6165 5958 1446 141 0 0 chr5 154199728 154199941 -48885591 + L1PA16 LINE L1 5726 5938 -228 295 264 246 18 chr5 154200328 154200438 -48885094 - MIR3 SINE MIR -72 136 2 306 263 294 0 chr5 154200869 154201029 -48884503 + MIR SINE MIR 2 208 -54 392 267 9 9 chr5 154201230 154201335 -48884197 - MIR SINE MIR -58 150 46 623 341 31 4 chr5 154204350 154204576 -48880956 + MIR SINE MIR 29 260 -2 298 209 187 45 chr5 154205044 154205178 -48880354 + MER117 DNA MER1_type 8 160 -37 694 139 0 0 chr5 154205453 154205554 -48879978 - AluSg/x SINE Alu -16 296 196 710 213 0 19 chr5 154205732 154205892 -48879640 - L1M4 LINE L1 -3278 2868 2712 1005 264 108 30 chr5 154205903 154206366 -48879166 + MLT1H LTR MaLR 1 547 -2 545 235 159 6 chr5 154207322 154207492 -48878040 - MIR SINE MIR -59 203 8 399 279 36 9 chr5 154208119 154208230 -48877302 + MIR SINE MIR 77 190 -72 341 235 20 20 chr5 154208285 154208383 -48877149 + LTR16A1 LTR ERVL 51 148 -309 4811 151 36 17 chr5 154208441 154209497 -48876035 - L1MB7 LINE L1 -16 6168 5099 788 242 88 9 chr5 154209513 154209740 -48875792 + LTR16A LTR ERVL 200 444 -6 668 330 44 29 chr5 154209787 154210271 -48875261 + L2 LINE L2 2782 3270 -2 415 228 22 0 chr5 154210995 154211087 -48874445 - MIR SINE MIR -168 94 1 540 235 101 28 chr5 154212246 154212425 -48873107 + MLT1J LTR MaLR 318 509 -2 260 190 19 44 chr5 154212456 154212528 -48873004 + MIR SINE MIR 103 181 -27 211 288 108 18 chr5 154213249 154213360 -48872172 - MIR3 SINE MIR -51 157 37 249 250 0 0 chr5 154213411 154213479 -48872053 + CT-rich Low_complexity Low_complexity 2 69 0 215 286 16 49 chr5 154213448 154213633 -48871899 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 202 340 97 10 chr5 154213753 154213856 -48871676 + L2 LINE L2 3200 3311 -2 205 167 0 0 chr5 154213941 154213977 -48871555 + GA-rich Low_complexity Low_complexity 5 40 0 241 258 129 0 chr5 154214242 154214304 -48871228 - MIR SINE MIR -58 150 81 325 268 93 10 chr5 154215390 154215487 -48870045 + MIR SINE MIR 157 261 -1 186 43 0 0 chr5 154217343 154217366 -48868166 + (TAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 154217902 154217924 -48867608 + AT_rich Low_complexity Low_complexity 1 22 0 477 218 30 0 chr5 154220054 154220155 -48865377 + MER94 DNA DNA 2 105 -29 217 49 0 49 chr5 154220231 154220272 -48865260 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr5 154220793 154220819 -48864713 + (CA)n Simple_repeat Simple_repeat 2 27 0 365 265 10 39 chr5 154221577 154221679 -48863853 + MIR SINE MIR 34 132 -76 295 186 12 58 chr5 154221926 154222012 -48863520 + MLT1J LTR MaLR 111 192 -319 252 319 124 11 chr5 154222060 154222245 -48863287 + MLT1J LTR MaLR 306 511 0 355 256 128 0 chr5 154222559 154222684 -48862848 - L1ME4a LINE L1 -2 6119 5979 692 280 43 22 chr5 154222694 154222926 -48862606 - MIR SINE MIR 0 262 26 375 281 74 0 chr5 154223078 154223213 -48862319 - L1ME4a LINE L1 -326 5795 5651 252 333 54 0 chr5 154223646 154223739 -48861793 + MIR SINE MIR 134 231 -31 593 265 91 48 chr5 154223982 154224212 -48861320 + MIR SINE MIR 20 259 -3 275 287 34 91 chr5 154224435 154224644 -48860888 + MER117 DNA MER1_type 1 197 0 1872 128 24 0 chr5 154225736 154226025 -48859507 + AluJb SINE Alu 1 296 -16 353 256 39 50 chr5 154226025 154226205 -48859327 + L1ME4a LINE L1 5631 5808 -313 376 319 18 3 chr5 154227498 154227633 -48857899 + MIR SINE MIR 32 165 -64 426 94 0 0 chr5 154227717 154227781 -48857751 + (CATA)n Simple_repeat Simple_repeat 2 65 0 267 246 131 0 chr5 154227815 154227937 -48857595 + L1ME4a LINE L1 5966 6103 -18 489 245 112 14 chr5 154228222 154228365 -48857167 + MIR3 SINE MIR 4 160 -48 221 288 166 29 chr5 154228407 154228546 -48856986 - MER5B DNA MER1_type -17 161 4 211 307 158 10 chr5 154228559 154228660 -48856872 + L2 LINE L2 3192 3307 -6 21 0 0 0 chr5 154228661 154228682 -48856850 + AT_rich Low_complexity Low_complexity 1 21 0 456 299 9 83 chr5 154229652 154229869 -48855663 - MIR3 SINE MIR -7 201 1 186 71 0 0 chr5 154230068 154230096 -48855436 + (A)n Simple_repeat Simple_repeat 1 28 0 676 227 23 29 chr5 154230608 154230780 -48854752 + MIR SINE MIR 74 244 -18 4974 175 19 12 chr5 154230994 154232004 -48853528 + L1PB4 LINE L1 4470 5498 -658 2370 70 3 13 chr5 154232004 154232318 -48853214 + AluY SINE Alu 1 311 0 4974 175 19 12 chr5 154232318 154232982 -48852550 + L1PB4 LINE L1 5498 6156 0 287 280 13 0 chr5 154235542 154235617 -48849915 + MIR SINE MIR 3 78 -184 320 248 94 34 chr5 154236082 154236199 -48849333 + MIR SINE MIR 60 183 -79 424 232 168 74 chr5 154236792 154236982 -48848550 + MLT1J LTR MaLR 111 318 -193 253 305 86 20 chr5 154236992 154237143 -48848389 + MLT1L LTR MaLR 447 607 -8 210 371 40 0 chr5 154237555 154237679 -48847853 + MIR3 SINE MIR 74 202 -6 2046 130 3 13 chr5 154238417 154238732 -48846800 + AluSx SINE Alu 1 312 0 479 223 96 6 chr5 154239568 154239725 -48845807 - MIR SINE MIR -61 201 31 411 239 13 53 chr5 154239792 154240016 -48845516 - MER112 DNA MER1_type -4 256 1 23 0 0 0 chr5 154240082 154240105 -48845427 + AT_rich Low_complexity Low_complexity 1 23 0 1160 158 16 0 chr5 154240283 154240467 -48845065 - MER5A DNA MER1_type 0 189 3 666 303 86 42 chr5 154241252 154241612 -48843920 + L2 LINE L2 2897 3272 0 1970 133 0 13 chr5 154242074 154242376 -48843156 + AluJb SINE Alu 1 298 -14 4494 118 29 0 chr5 154242596 154243071 -48842461 - L1MA6 LINE L1 0 6300 5797 2080 122 0 3 chr5 154243071 154243374 -48842158 - AluSx SINE Alu -10 302 1 4494 118 29 0 chr5 154243374 154243585 -48841947 - L1MA6 LINE L1 -503 5797 5594 8505 136 23 4 chr5 154243585 154245037 -48840495 + L1M2 LINE L1 3405 4883 -1263 1834 144 9 12 chr5 154245049 154245368 -48840164 + L1M2 LINE L1 5254 5571 -729 211 319 53 21 chr5 154245603 154245697 -48839835 - MIR3 SINE MIR -7 201 105 23 0 0 0 chr5 154246216 154246239 -48839293 + AT_rich Low_complexity Low_complexity 1 23 0 669 269 88 31 chr5 154246820 154247047 -48838485 + MIR SINE MIR 13 252 -10 616 293 117 25 chr5 154248075 154248156 -48837376 + MIR SINE MIR 2 74 -188 2029 180 135 33 chr5 154248156 154248667 -48836865 + MLT1F1 LTR MaLR 5 567 0 616 293 117 25 chr5 154248667 154248824 -48836708 + MIR SINE MIR 74 262 0 423 288 117 54 chr5 154248836 154249076 -48836456 + MIR SINE MIR 3 257 -5 285 355 45 45 chr5 154249257 154249525 -48836007 + L2 LINE L2 3005 3272 0 2342 90 0 7 chr5 154249541 154249842 -48835690 + AluSq SINE Alu 1 299 -14 212 57 0 29 chr5 154249891 154249926 -48835606 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 5060 172 32 31 chr5 154250403 154251231 -48834301 + L1ME1 LINE L1 4320 5145 -1021 4608 135 12 1 chr5 154251231 154251955 -48833577 + L1MA8 LINE L1 5556 6287 -4 2435 60 0 27 chr5 154251964 154252263 -48833269 + AluY SINE Alu 1 291 -20 5060 172 32 31 chr5 154252263 154253263 -48832269 + L1ME1 LINE L1 5152 6155 -11 370 221 195 7 chr5 154253346 154253500 -48832032 + MIR SINE MIR 20 202 -60 667 265 35 61 chr5 154254287 154254705 -48830827 + L1ME2 LINE L1 4877 5285 -902 1796 176 3 25 chr5 154254705 154255024 -48830508 + AluJb SINE Alu 1 312 0 667 265 35 61 chr5 154255024 154255166 -48830366 + L1ME2 LINE L1 5285 5429 -758 591 265 37 11 chr5 154255798 154255987 -48829545 + MIR SINE MIR 2 195 -67 251 286 36 12 chr5 154256404 154256488 -48829044 - MIR3 SINE MIR -27 181 96 448 120 0 74 chr5 154257497 154257605 -48827927 + MIR SINE MIR 101 200 -62 295 293 57 41 chr5 154258152 154258275 -48827257 - L2 LINE L2 -5 3267 3143 698 195 17 17 chr5 154258692 154258866 -48826666 + L1MB4 LINE L1 6002 6175 -5 357 259 82 57 chr5 154259771 154259929 -48825603 - MIR SINE MIR -41 221 60 333 306 75 21 chr5 154260158 154260344 -48825188 + MIR SINE MIR 7 202 -60 490 313 79 18 chr5 154260531 154260758 -48824774 - MIR SINE MIR -4 258 18 413 18 0 18 chr5 154261232 154261287 -48824245 + (CA)n Simple_repeat Simple_repeat 1 54 0 432 275 78 37 chr5 154261801 154262019 -48823513 + L1ME2 LINE L1 5567 5793 -2015 834 177 9 82 chr5 154262025 154262055 -48823477 + MER2 DNA MER2_type 1 32 -313 2272 103 23 0 chr5 154262055 154262357 -48823175 - AluSx SINE Alu -3 309 1 834 177 9 82 chr5 154262357 154262546 -48822986 + MER2 DNA MER2_type 32 204 -141 368 157 129 14 chr5 154262670 154262740 -48822792 + MER2 DNA MER2_type 267 344 -1 317 207 98 12 chr5 154262790 154262872 -48822660 + L1MC4 LINE L1 6924 7012 -1030 * 424 237 161 65 chr5 154262865 154263051 -48822481 + L1ME2 LINE L1 5955 6158 -6 1911 169 7 7 chr5 154263070 154263371 -48822161 + AluJb SINE Alu 1 301 -11 2077 256 55 38 chr5 154263438 154263546 -48821986 + L1MC4 LINE L1 7138 7243 -799 1671 170 39 3 chr5 154263546 154263829 -48821703 + AluJo SINE Alu 1 293 -19 2077 256 55 38 chr5 154263829 154264607 -48820925 + L1MC4 LINE L1 7243 8039 -3 275 84 84 28 chr5 154264842 154264913 -48820619 + GA-rich Low_complexity Low_complexity 4 78 0 184 217 22 0 chr5 154265920 154265966 -48819566 - MIR SINE MIR -155 107 61 1209 169 72 0 chr5 154266062 154266269 -48819263 + MER58A DNA MER1_type 3 224 0 577 253 74 10 chr5 154266878 154267080 -48818452 - MIR SINE MIR -37 225 11 2148 107 0 32 chr5 154267121 154267431 -48818101 + AluSc SINE Alu 1 300 -9 896 150 33 72 chr5 154267745 154267925 -48817607 - MER63A DNA MER1_type -37 173 1 279 324 85 6 chr5 154268019 154268191 -48817341 - MIR SINE MIR -50 212 22 * 302 294 66 47 chr5 154268186 154268397 -48817135 + L2 LINE L2 3099 3313 0 569 230 20 33 chr5 154269497 154269649 -48815883 - MER103 DNA DNA -8 158 9 183 42 0 0 chr5 154269661 154269685 -48815847 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2290 99 0 16 chr5 154269687 154270001 -48815531 + AluSg SINE Alu 1 309 -1 340 205 48 24 chr5 154270588 154270671 -48814861 + MIR SINE MIR 107 191 -71 774 247 135 22 chr5 154270686 154270953 -48814579 + L1ME3A LINE L1 5869 6165 -5 242 319 33 11 chr5 154271663 154271754 -48813778 - MIR SINE MIR -68 140 48 2881 133 43 5 chr5 154271985 154272427 -48813105 + LTR32 LTR ERVL 13 471 0 534 195 0 42 chr5 154273107 154273225 -48812307 - MIR SINE MIR -44 218 106 225 284 104 75 chr5 154273230 154273364 -48812168 - L2 LINE L2 0 3313 3176 * 237 329 12 24 chr5 154273357 154273442 -48812090 - MIR SINE MIR -156 106 23 277 279 46 82 chr5 154273502 154273807 -48811725 + HsTC2 DNA Tc2 3 296 -1602 * 1058 245 172 8 chr5 154273792 154274147 -48811385 + HsTC2 DNA Tc2 468 880 -1018 611 282 103 0 chr5 154274431 154274644 -48810888 - MIR SINE MIR 0 262 28 630 265 70 58 chr5 154275579 154275836 -48809696 - MIR SINE MIR 0 262 3 427 333 0 0 chr5 154275887 154276019 -48809513 + MIR SINE MIR 123 254 -8 23 0 0 0 chr5 154276096 154276119 -48809413 + AT_rich Low_complexity Low_complexity 1 23 0 2293 113 0 3 chr5 154276169 154276471 -48809061 + AluSx SINE Alu 1 301 -11 655 183 0 0 chr5 154277520 154277624 -48807908 - FLAM_A SINE Alu -38 104 1 275 151 198 0 chr5 154277695 154277781 -48807751 - L1MC4 LINE L1 0 8042 7940 195 42 0 0 chr5 154279228 154279252 -48806280 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2412 83 7 3 chr5 154279545 154279847 -48805685 - AluSq SINE Alu -9 304 2 601 219 16 23 chr5 154279898 154280026 -48805506 + FLAM_C SINE Alu 3 129 -14 227 317 79 0 chr5 154280135 154280236 -48805296 + MIR SINE MIR 97 205 -57 276 244 58 12 chr5 154280518 154280604 -48804928 - L2 LINE L2 -1 3271 3182 557 272 25 40 chr5 154281069 154281271 -48804261 - MIR SINE MIR -18 244 46 252 0 0 0 chr5 154281408 154281436 -48804096 + (GA)n Simple_repeat Simple_repeat 2 29 0 298 349 9 9 chr5 154281691 154281800 -48803732 + L2 LINE L2 3137 3245 -27 375 89 0 0 chr5 154282725 154282781 -48802751 + (TC)n Simple_repeat Simple_repeat 2 57 0 327 104 0 0 chr5 154282781 154282829 -48802703 + (CA)n Simple_repeat Simple_repeat 1 48 0 534 263 89 40 chr5 154283070 154283294 -48802238 + MIR SINE MIR 16 250 -12 675 252 108 34 chr5 154284115 154284468 -48801064 + L1MC4a LINE L1 5564 5942 -1866 531 191 0 121 chr5 154284683 154284824 -48800708 - FLAM_A SINE Alu -9 124 1 263 272 54 11 chr5 154284844 154284936 -48800596 + L1ME4a LINE L1 5945 6040 -81 201 147 0 0 chr5 154284984 154285018 -48800514 + (CAA)n Simple_repeat Simple_repeat 2 35 0 432 279 5 17 chr5 154286328 154286526 -48799006 + MIR SINE MIR 23 257 -5 4747 122 30 5 chr5 154286772 154287509 -48798023 + L1PA16 LINE L1 5409 6163 -3 2546 64 0 0 chr5 154287720 154288016 -48797516 + AluY SINE Alu 1 296 -15 266 318 0 0 chr5 154288706 154288772 -48796760 + HAL1 LINE L1 11 76 -2431 449 222 66 147 chr5 154289004 154289287 -48796245 + HAL1 LINE L1 2200 2454 -53 2425 60 0 23 chr5 154289287 154289588 -48795944 - AluY SINE Alu -17 294 1 449 222 66 147 chr5 154289588 154289638 -48795894 + HAL1 LINE L1 2454 2506 -1 507 198 0 8 chr5 154290376 154290483 -48795049 - MER5A DNA MER1_type -80 109 4 369 0 0 0 chr5 154290490 154290531 -48795001 + (CA)n Simple_repeat Simple_repeat 2 42 0 874 210 6 11 chr5 154290532 154290708 -48794824 - MER5B DNA MER1_type -3 175 1 385 240 50 0 chr5 154290764 154290864 -48794668 - L2 LINE L2 -21 3251 3147 344 162 118 0 chr5 154291687 154291755 -48793777 + MER81 DNA DNA 8 83 -31 468 259 18 0 chr5 154292365 154292477 -48793055 - MER81 DNA DNA 0 114 1 743 230 99 0 chr5 154294069 154294260 -48791272 + MIR SINE MIR 53 262 0 499 310 46 5 chr5 154294335 154294532 -48791000 + MIR SINE MIR 21 225 -37 2166 136 0 0 chr5 154294837 154295138 -48790394 - AluSx SINE Alu -11 301 1 473 282 138 11 chr5 154295730 154295911 -48789621 + MIR SINE MIR 6 209 -53 237 302 114 94 chr5 154296351 154296529 -48789003 - L2 LINE L2 -2 3270 3097 1071 164 86 20 chr5 154296529 154296773 -48788759 - MIR SINE MIR 0 262 3 237 302 114 94 chr5 154296773 154297265 -48788267 - L2 LINE L2 -175 3097 2569 352 281 98 43 chr5 154298631 154298708 -48786824 - MIR SINE MIR -65 197 126 2265 89 0 48 chr5 154298708 154299022 -48786510 - AluSp SINE Alu -14 299 1 352 281 98 43 chr5 154299022 154299108 -48786424 - MIR SINE MIR -136 126 25 885 308 56 73 chr5 154299681 154300429 -48785103 - L2 LINE L2 0 3313 2586 185 342 51 0 chr5 154300855 154300934 -48784598 - L3b LINE CR1 -176 1407 1325 216 333 31 23 chr5 154301701 154301795 -48783737 - MIR SINE MIR -105 157 60 2594 18 0 0 chr5 154301795 154302076 -48783456 + AluYb8 SINE Alu 21 301 -17 216 333 31 23 chr5 154302076 154302110 -48783422 - MIR SINE MIR -202 60 28 1045 273 35 9 chr5 154304110 154304451 -48781081 + L1ME4a LINE L1 5527 5876 -245 539 370 18 42 chr5 154304455 154304785 -48780747 - L2 LINE L2 -8 3264 2943 1927 152 7 0 chr5 154304823 154305113 -48780419 + AluSx SINE Alu 1 292 -20 25 83 0 0 chr5 154305147 154305207 -48780325 + AT_rich Low_complexity Low_complexity 1 60 0 234 128 0 0 chr5 154305307 154305346 -48780186 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 190 254 193 61 chr5 154306070 154306184 -48779348 - L2 LINE L2 -5 3267 3139 339 324 80 80 chr5 154306319 154306415 -48779117 + L2 LINE L2 3060 3155 -117 2109 152 87 34 chr5 154306415 154306829 -48778703 + MER63B DNA MER1_type 1 436 0 339 324 80 80 chr5 154306829 154306945 -48778587 + L2 LINE L2 3154 3272 0 670 119 0 25 chr5 154307340 154307458 -48778074 + L1PA14 LINE L1 5923 6037 -124 271 213 28 50 chr5 154307563 154307704 -48777828 + G-rich Low_complexity Low_complexity 6 143 0 2977 198 67 7 chr5 154307832 154308428 -48777104 - MER82 DNA MER2_type -8 645 14 609 316 53 4 chr5 154308581 154308847 -48776685 - L1M4 LINE L1 -1033 5113 4835 1241 195 22 123 chr5 154308847 154309005 -48776527 + MLT1A1 LTR MaLR 1 173 -192 798 155 0 70 chr5 154309005 154309147 -48776385 + AluJo SINE Alu 1 132 -170 1241 195 22 123 chr5 154309147 154309394 -48776138 + MLT1A1 LTR MaLR 173 365 0 189 0 0 0 chr5 154309670 154309691 -48775841 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 292 94 38 75 chr5 154309722 154309882 -48775650 + G-rich Low_complexity Low_complexity 1 154 0 243 100 43 29 chr5 154309923 154309993 -48775539 + G-rich Low_complexity Low_complexity 2 72 0 248 171 19 76 chr5 154310009 154310114 -48775418 + (TGGG)n Simple_repeat Simple_repeat 2 100 0 880 125 0 15 chr5 154310114 154310250 -48775282 + AluSg/x SINE Alu 172 305 -5 840 325 71 43 chr5 154310828 154311407 -48774125 - L2 LINE L2 -1 3271 2682 774 181 141 20 chr5 154311585 154311734 -48773798 + AluJo SINE Alu 140 306 -6 268 264 168 24 chr5 154312537 154312662 -48772870 - MIR SINE MIR -100 162 20 210 235 20 20 chr5 154312688 154312739 -48772793 + MER5B DNA MER1_type 17 67 -111 810 107 15 30 chr5 154312740 154312871 -48772661 + FLAM_C SINE Alu 5 133 0 609 235 42 7 chr5 154312955 154313116 -48772416 - L1ME1 LINE L1 -5 6161 6015 182 283 19 0 chr5 154313117 154313170 -48772362 + MER5A DNA MER1_type 136 189 0 2161 128 26 47 chr5 154313531 154313875 -48771657 + MER1B DNA MER1_type 1 337 0 205 290 0 16 chr5 154314127 154314189 -48771343 + MIR SINE MIR 33 93 -115 3800 130 2 45 chr5 154314200 154314373 -48771159 - L1PA16 LINE L1 0 6166 5987 2570 159 36 14 chr5 154314373 154314788 -48770744 - MSTB LTR MaLR 0 426 3 3800 130 2 45 chr5 154314788 154315230 -48770302 - L1PA16 LINE L1 -179 5987 5578 198 253 91 50 chr5 154315515 154315614 -48769918 + L2 LINE L2 3160 3262 -10 278 242 0 61 chr5 154315785 154315851 -48769681 - MIR SINE MIR -62 146 85 693 302 45 20 chr5 154316029 154316274 -48769258 + MIR SINE MIR 12 262 0 1332 110 115 5 chr5 154316944 154317162 -48768370 + L1MB3 LINE L1 5940 6181 -2 326 244 111 11 chr5 154318361 154318451 -48767081 + L2 LINE L2 3215 3313 0 910 222 70 25 chr5 154318597 154318840 -48766692 - MIR SINE MIR -1 261 8 335 275 47 40 chr5 154318911 154319060 -48766472 + MER117 DNA MER1_type 32 181 -16 281 269 331 0 chr5 154319130 154319260 -48766272 - MIR3 SINE MIR 0 208 36 218 227 152 0 chr5 154319521 154319587 -48765945 + MIR SINE MIR 61 136 -126 1819 119 7 18 chr5 154319773 154320050 -48765482 + AluSx SINE Alu 35 308 -4 21 36 0 0 chr5 154320781 154320809 -48764723 + AT_rich Low_complexity Low_complexity 1 28 0 185 147 0 0 chr5 154320876 154320910 -48764622 - L2 LINE L2 -946 2368 2335 250 170 19 19 chr5 154323050 154323103 -48762429 + (CA)n Simple_repeat Simple_repeat 1 53 0 323 279 43 81 chr5 154324513 154324674 -48760858 + MIR3 SINE MIR 48 202 -6 1626 277 83 28 chr5 154325538 154325612 -48759920 - L1 LINE L1 -1088 5058 4989 1917 119 49 7 chr5 154325612 154325898 -48759634 - AluSx SINE Alu -14 298 1 1626 277 83 28 chr5 154325898 154326923 -48758609 - L1 LINE L1 -1157 4989 3871 253 326 0 31 chr5 154327736 154327834 -48757698 - MIR SINE MIR -128 134 40 224 281 58 50 chr5 154328926 154329047 -48756485 + L2 LINE L2 2600 2721 -593 227 171 0 0 chr5 154329301 154329336 -48756196 - L2 LINE L2 -14 3299 3265 42 48 0 0 chr5 154329817 154329880 -48755652 + AT_rich Low_complexity Low_complexity 1 63 0 667 321 43 43 chr5 154329914 154330313 -48755219 + L2 LINE L2 2231 2629 -685 3151 224 133 3 chr5 154330837 154331611 -48753921 - Zaphod DNA AcHobo -3155 876 2 425 150 105 23 chr5 154332268 154332401 -48753131 - L1ME4a LINE L1 0 6121 5978 1059 265 63 42 chr5 154332425 154332992 -48752540 - L1ME4a LINE L1 -201 5920 5342 442 267 43 17 chr5 154333207 154333323 -48752209 - L2 LINE L2 0 3313 3195 1594 195 0 17 chr5 154333324 154333626 -48751906 + AluSx SINE Alu 1 297 -15 323 279 147 39 chr5 154333665 154333977 -48751555 - L1ME4a LINE L1 -1301 4845 4500 196 297 81 14 chr5 154334453 154334527 -48751005 - MIR SINE MIR -75 187 109 27 0 0 0 chr5 154334665 154334692 -48750840 + AT_rich Low_complexity Low_complexity 1 27 0 1312 142 24 0 chr5 154335676 154335881 -48749651 - L1PA13 LINE L1 -3 6160 5951 28 48 0 0 chr5 154336166 154336208 -48749324 + AT_rich Low_complexity Low_complexity 1 42 0 1302 230 6 12 chr5 154336422 154336752 -48748780 + L1MA3 LINE L1 2757 3084 -3062 * 7865 126 29 24 chr5 154336734 154336861 -48748671 + L1MA3 LINE L1 3985 4110 -2195 7037 108 24 39 chr5 154336861 154337948 -48747584 + MER11C LTR ERVK 1 1071 0 7865 126 29 24 chr5 154337948 154339860 -48745672 + L1MA3 LINE L1 4110 6036 -269 1893 121 7 52 chr5 154339860 154340166 -48745366 + AluSq SINE Alu 1 292 -21 7865 126 29 24 chr5 154340166 154340438 -48745094 + L1MA3 LINE L1 6036 6305 0 195 186 0 0 chr5 154340505 154340548 -48744984 + (CA)n Simple_repeat Simple_repeat 2 44 0 319 294 32 0 chr5 154340548 154340674 -48744858 + L1MC4 LINE L1 7913 8042 0 194 339 54 18 chr5 154341201 154341313 -48744219 + L2 LINE L2 2847 2962 -310 29 110 0 0 chr5 154341443 154341525 -48744007 + AT_rich Low_complexity Low_complexity 1 82 0 251 200 0 0 chr5 154341563 154341613 -48743919 - L1MC4a LINE L1 0 7808 7759 4498 192 86 52 chr5 154341625 154342825 -48742707 - L1MC4 LINE L1 -143 7899 6660 238 352 0 0 chr5 154343000 154343071 -48742461 - L2 LINE L2 -978 2336 2266 207 0 0 0 chr5 154343117 154343140 -48742392 + (A)n Simple_repeat Simple_repeat 1 23 0 726 231 0 0 chr5 154343147 154343268 -48742264 + FLAM_A SINE Alu 1 121 -12 4450 148 78 26 chr5 154343271 154343841 -48741691 + L1MB8 LINE L1 4764 5303 -875 1484 24 0 0 chr5 154343841 154344005 -48741527 - L1PA4 LINE L1 -2 6153 5990 4450 148 78 26 chr5 154344005 154344776 -48740756 + L1MB8 LINE L1 5303 6173 -5 269 316 25 13 chr5 154345531 154345610 -48739922 + L2 LINE L2 3194 3273 -40 216 0 0 0 chr5 154345610 154345634 -48739898 + (CAT)n Simple_repeat Simple_repeat 1 24 0 694 235 163 0 chr5 154345792 154345988 -48739544 - MIR SINE MIR -30 232 5 330 234 140 29 chr5 154345992 154346163 -48739369 + L1ME4a LINE L1 5688 5877 -244 604 183 117 17 chr5 154346180 154346300 -48739232 - FLAM_C SINE Alu 0 133 2 327 49 0 0 chr5 154346309 154346350 -48739182 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 3516 156 103 6 chr5 154346356 154346979 -48738553 - MER72 LTR ERV1 -35 687 5 1478 206 62 15 chr5 154346983 154347322 -48738210 - MER72-int LTR ERV1 0 6758 6404 1210 155 0 5 chr5 154347322 154347516 -48738016 + AluSq SINE Alu 116 308 -5 558 257 115 0 chr5 154347951 154348099 -48737433 + MER103 DNA DNA 2 166 0 806 254 0 17 chr5 154348312 154348485 -48737047 + FRAM SINE Alu 1 170 -6 298 198 32 103 chr5 154348952 154349078 -48736454 + L2 LINE L2 2934 3050 -222 216 200 0 0 chr5 154349113 154349153 -48736379 - L2 LINE L2 -12 3301 3262 1501 49 11 11 chr5 154349979 154350162 -48735370 + AluSg SINE Alu 2 184 -126 840 205 113 29 chr5 154350723 154350962 -48734570 - MIR SINE MIR 0 262 4 262 277 33 55 chr5 154350983 154351095 -48734437 - MIR SINE MIR -62 146 39 180 0 0 0 chr5 154351308 154351328 -48734204 + (A)n Simple_repeat Simple_repeat 1 20 0 1717 172 0 24 chr5 154352245 154352542 -48732990 + AluJo SINE Alu 1 290 -22 23 33 0 0 chr5 154352589 154352619 -48732913 + AT_rich Low_complexity Low_complexity 1 30 0 1610 139 154 17 chr5 154352627 154352667 -48732865 - L1MB4 LINE L1 -1 6179 6146 1851 155 3 20 chr5 154352667 154352971 -48732561 + AluJo SINE Alu 1 299 -13 1610 139 154 17 chr5 154352971 154353333 -48732199 - L1MB4 LINE L1 -34 6146 5722 369 254 116 35 chr5 154353342 154353515 -48732017 - L1ME LINE L1 -351 5770 5584 1656 208 130 39 chr5 154353796 154354311 -48731221 - MER68 LTR ERV1 0 562 1 1163 245 89 9 chr5 154354496 154355021 -48730511 + L2 LINE L2 2697 3255 -58 330 236 270 11 chr5 154355212 154355386 -48730146 - LTR33 LTR ERVL -47 474 256 365 199 88 52 chr5 154355452 154355588 -48729944 - LTR33 LTR ERVL -380 141 1 302 302 75 50 chr5 154356126 154356285 -48729247 + MIR3 SINE MIR 1 163 -45 528 330 48 30 chr5 154356741 154356971 -48728561 - MIR SINE MIR -26 236 3 218 293 91 30 chr5 154357226 154357325 -48728207 + L2 LINE L2 3187 3291 -22 1179 175 0 0 chr5 154358355 154358561 -48726971 + MER46A DNA MER2_type 31 236 0 27 0 0 0 chr5 154359605 154359632 -48725900 + AT_rich Low_complexity Low_complexity 1 27 0 180 77 0 0 chr5 154361451 154361477 -48724055 + (CCG)n Simple_repeat Simple_repeat 3 28 0 2236 85 14 0 chr5 154362347 154362641 -48722891 - AluSq SINE Alu -15 298 1 1966 91 28 0 chr5 154362658 154362911 -48722621 - AluSc SINE Alu -12 297 38 1798 147 0 7 chr5 154363246 154363546 -48721986 + L1PA15 LINE L1 5868 6165 0 554 210 70 46 chr5 154363809 154363985 -48721547 + MIR SINE MIR 66 245 -17 580 216 42 48 chr5 154364004 154364171 -48721361 - L2 LINE L2 -49 3264 3099 1148 158 126 18 chr5 154364245 154364467 -48721065 + AluSx SINE Alu 1 246 -66 18892 90 32 6 chr5 154364609 154366287 -48719245 - Charlie3 DNA MER1_type 0 2706 933 2209 133 0 0 chr5 154366287 154366589 -48718943 - AluSx SINE Alu -10 302 1 18892 90 32 6 chr5 154366589 154367547 -48717985 - Charlie3 DNA MER1_type -1773 933 1 2066 133 20 3 chr5 154367808 154368110 -48717422 - AluSx SINE Alu -5 307 1 1649 157 92 38 chr5 154368600 154368970 -48716562 + MLT1B LTR MaLR 1 390 0 527 285 60 13 chr5 154369004 154369239 -48716293 + L1ME LINE L1 5513 5758 -363 2422 61 3 3 chr5 154369741 154370036 -48715496 + AluY SINE Alu 1 295 -16 216 207 103 0 chr5 154370532 154370590 -48714942 - L2 LINE L2 -72 3200 3137 1376 193 184 32 chr5 154370806 154371109 -48714423 - MLT1D LTR MaLR 0 505 115 1755 138 48 31 chr5 154371109 154371464 -48714068 + MLT1A1 LTR MaLR 5 365 0 1376 193 184 32 chr5 154371464 154371596 -48713936 - MLT1D LTR MaLR -390 115 4 7440 204 18 6 chr5 154371605 154373382 -48712150 + L1M2 LINE L1 2791 4591 -2257 2019 132 28 0 chr5 154373382 154373670 -48711862 + AluSq SINE Alu 1 296 -17 364 200 21 0 chr5 154373678 154373773 -48711759 + GA-rich Low_complexity Low_complexity 2 98 0 451 113 12 0 chr5 154373781 154373861 -48711671 + L1M2 LINE L1 4583 4663 -2185 702 202 45 18 chr5 154374010 154374222 -48711310 - L1MC4 LINE L1 -1339 6656 6439 196 109 22 43 chr5 154374770 154374816 -48710716 + A-rich Low_complexity Low_complexity 4 48 0 1777 260 74 70 chr5 154375037 154375220 -48710312 - L2 LINE L2 -588 2726 2545 1882 104 52 15 chr5 154375220 154375488 -48710044 + AluSx SINE Alu 1 278 -34 1777 260 74 70 chr5 154375488 154376043 -48709489 - L2 LINE L2 -769 2545 1985 3407 142 59 53 chr5 154376043 154376171 -48709361 + L1MB8 LINE L1 5461 5587 -591 2477 145 45 9 chr5 154376171 154376618 -48708914 - L1PA15 LINE L1 0 6165 5703 3407 142 59 53 chr5 154376618 154377203 -48708329 + L1MB8 LINE L1 5587 6178 0 585 278 239 7 chr5 154377204 154377513 -48708019 - L2 LINE L2 -1320 1994 1614 1113 251 92 37 chr5 154377954 154378530 -48707002 - MLT1D LTR MaLR 0 505 19 2083 90 8 0 chr5 154378605 154378871 -48706661 - AluY SINE Alu -12 299 32 2073 118 0 0 chr5 154378938 154379218 -48706314 + AluSx SINE Alu 1 280 -32 850 188 6 12 chr5 154379428 154379598 -48705934 + L1PB4 LINE L1 5978 6146 -10 213 296 70 0 chr5 154379758 154379829 -48705703 - L3b LINE CR1 -87 1496 1421 251 315 54 20 chr5 154380009 154380158 -48705374 + L2 LINE L2 2313 2466 -848 776 279 86 32 chr5 154380455 154381151 -48704381 - L1MEc LINE L1 -4579 1817 1084 501 292 31 66 chr5 154382287 154382463 -48703069 + L1M4 LINE L1 3496 3677 -2469 1916 124 60 0 chr5 154382463 154382746 -48702786 + AluSx SINE Alu 1 300 -12 501 292 31 66 chr5 154382746 154383083 -48702449 + L1M4 LINE L1 3677 3991 -2155 616 98 9 36 chr5 154383107 154383219 -48702313 + MER65A LTR ERV1 87 195 -250 498 263 85 35 chr5 154383275 154383591 -48701941 + L1M4 LINE L1 4089 4420 -1726 1618 117 18 18 chr5 154383592 154383866 -48701666 + MER65A LTR ERV1 1 274 -171 31088 92 12 8 chr5 154383868 154389591 -48695941 + L1PA6 LINE L1 717 6462 -7 1106 82 28 11 chr5 154389633 154389815 -48695717 + MER65A LTR ERV1 261 445 0 721 223 22 22 chr5 154389858 154390087 -48695445 + L1M4 LINE L1 4458 4686 -1460 2355 148 19 40 chr5 154390094 154390521 -48695011 - MSTC LTR MaLR -5 423 6 580 160 0 84 chr5 154390621 154390740 -48694792 - FLAM_C SINE Alu -34 109 1 772 166 6 32 chr5 154390742 154390899 -48694633 - MLT1A1 LTR MaLR -212 153 1 516 310 41 4 chr5 154390920 154391165 -48694367 + L1M4 LINE L1 4860 5113 -1033 2752 198 66 7 chr5 154391320 154391922 -48693610 + MER82 DNA MER2_type 16 653 0 1033 250 26 0 chr5 154391932 154392160 -48693372 + Tigger7 DNA MER2_type 1 234 -471 572 175 0 0 chr5 154392170 154392267 -48693265 + Tigger7 DNA MER2_type 2394 2490 -1 644 332 56 47 chr5 154393102 154393442 -48692090 - L2 LINE L2 -446 2868 2526 1197 204 132 25 chr5 154393615 154393772 -48691760 - Zaphod DNA AcHobo 0 4031 3892 1775 141 21 77 chr5 154393772 154394098 -48691434 - AluJo SINE Alu -4 308 1 1197 204 132 25 chr5 154394098 154394333 -48691199 - Zaphod DNA AcHobo -139 3892 3597 1108 102 20 5 chr5 154394384 154394581 -48690951 + L1MA7 LINE L1 6091 6290 -1 1488 115 26 34 chr5 154394679 154394913 -48690619 - AluSg/x SINE Alu -14 298 67 286 306 0 0 chr5 154395111 154395209 -48690323 + G-rich Low_complexity Low_complexity 1 98 0 2770 226 134 0 chr5 154395398 154396164 -48689368 - Zaphod DNA AcHobo -3161 870 2 368 183 92 15 chr5 154396821 154396952 -48688580 - L1ME4a LINE L1 -1 6120 5980 829 279 60 39 chr5 154396978 154397545 -48687987 - L1ME4a LINE L1 -201 5920 5342 449 267 43 17 chr5 154397760 154397876 -48687656 - L2 LINE L2 0 3313 3195 1040 202 0 24 chr5 154397877 154398090 -48687442 + AluJo SINE Alu 1 208 -104 1830 121 0 0 chr5 154398092 154398332 -48687200 - AluSx SINE Alu -62 250 11 2161 128 0 0 chr5 154398518 154398814 -48686718 + AluSx SINE Alu 1 296 -16 235 274 149 40 chr5 154398853 154399149 -48686383 - L1ME4a LINE L1 -1301 4845 4518 200 297 81 14 chr5 154399641 154399715 -48685817 - MIR SINE MIR -75 187 109 27 0 0 0 chr5 154399853 154399880 -48685652 + AT_rich Low_complexity Low_complexity 1 27 0 1447 83 24 0 chr5 154400864 154401069 -48684463 - L1PA13 LINE L1 -3 6160 5951 249 33 0 0 chr5 154401179 154401209 -48684323 + (TA)n Simple_repeat Simple_repeat 2 31 0 254 328 117 47 chr5 154402601 154402729 -48682803 + MIR SINE MIR 59 195 -67 339 273 117 42 chr5 154403104 154403254 -48682278 + MIR3 SINE MIR 2 184 -24 212 367 0 50 chr5 154404428 154404567 -48680965 + MIR SINE MIR 82 213 -49 881 78 0 127 chr5 154404685 154404760 -48680772 - L1PA15 LINE L1 -5 6160 6116 2153 100 3 17 chr5 154404760 154405061 -48680471 + AluSc SINE Alu 1 297 -12 881 78 0 127 chr5 154405061 154405151 -48680381 - L1PA15 LINE L1 -49 6116 6016 480 242 100 36 chr5 154405154 154405348 -48680184 - MIR SINE MIR -50 212 9 3350 81 2 0 chr5 154405618 154406051 -48679481 + MER57B LTR ERV1 1 434 0 436 167 0 13 chr5 154406077 154406155 -48679377 - AluJb SINE Alu -115 197 121 506 277 40 45 chr5 154406870 154407072 -48678460 - MIR SINE MIR -11 251 51 1521 157 20 127 chr5 154407072 154407481 -48678051 - MLT1A1 LTR MaLR 0 365 1 2098 73 0 98 chr5 154407602 154407929 -48677603 + AluSc SINE Alu 1 295 -14 1562 176 50 7 chr5 154410585 154410864 -48674668 + AluJb SINE Alu 1 291 -21 224 276 0 17 chr5 154410980 154411038 -48674494 + CT-rich Low_complexity Low_complexity 2 58 0 2265 121 0 0 chr5 154411183 154411490 -48674042 + AluSx SINE Alu 1 307 -5 2775 125 26 0 chr5 154411535 154411950 -48673582 + MSTB LTR MaLR 1 426 0 4256 15 4 25 chr5 154412551 154413070 -48672462 - L1PA3 LINE L1 0 6155 5648 4355 115 11 43 chr5 154413633 154414418 -48671114 - L1MA8 LINE L1 -21 6270 5511 2008 123 37 7 chr5 154414965 154415265 -48670267 + AluJo SINE Alu 1 309 -3 371 329 81 49 chr5 154415408 154415654 -48669878 + L2 LINE L2 3006 3259 -13 432 261 26 43 chr5 154416561 154416715 -48668817 - L1M4 LINE L1 -1779 4367 4217 2132 136 3 3 chr5 154416715 154417025 -48668507 - AluJb SINE Alu -2 310 1 432 261 26 43 chr5 154417025 154417100 -48668432 - L1M4 LINE L1 -1929 4217 4142 299 253 47 53 chr5 154417123 154417353 -48668179 - L1MDa LINE L1 -4629 1911 1716 2300 87 13 7 chr5 154417359 154417657 -48667875 + AluSq SINE Alu 1 300 -13 183 129 0 0 chr5 154417679 154417710 -48667822 + (TTTC)n Simple_repeat Simple_repeat 4 34 0 506 273 114 104 chr5 154417920 154418053 -48667479 - L2 LINE L2 -1 3271 3141 2205 104 7 29 chr5 154418053 154418360 -48667172 + AluSq SINE Alu 1 300 -13 506 273 114 104 chr5 154418360 154418515 -48667017 - L2 LINE L2 -131 3141 2980 321 241 262 0 chr5 154418623 154418768 -48666764 - MIR SINE MIR -60 202 20 291 274 81 102 chr5 154418767 154418953 -48666579 - L2 LINE L2 -1 3271 3090 * 277 316 0 11 chr5 154419729 154419824 -48665708 + MIR SINE MIR 33 126 -82 505 283 19 28 chr5 154420303 154420515 -48665017 - L1ME LINE L1 -312 5809 5600 22 56 0 0 chr5 154420529 154420565 -48664967 + AT_rich Low_complexity Low_complexity 1 36 0 429 266 75 4 chr5 154420633 154420807 -48664725 + MIR SINE MIR 2 262 0 254 243 40 14 chr5 154420999 154421073 -48664459 - MIR SINE MIR -26 236 161 524 253 93 50 chr5 154421091 154421273 -48664259 - MIR SINE MIR 0 262 73 211 239 216 38 chr5 154421273 154421412 -48664120 - MIR SINE MIR -61 147 2 204 420 0 0 chr5 154421891 154421972 -48663560 + MIR SINE MIR 42 122 -86 2523 38 0 0 chr5 154422027 154422315 -48663217 + AluY SINE Alu 5 292 -19 202 278 0 0 chr5 154422691 154422745 -48662787 + G-rich Low_complexity Low_complexity 5 58 0 339 302 62 0 chr5 154422781 154422877 -48662655 - MIR SINE MIR -76 132 31 1753 156 20 10 chr5 154423512 154423813 -48661719 + AluJo SINE Alu 1 304 -8 255 125 0 0 chr5 154423852 154423892 -48661640 + (TCCC)n Simple_repeat Simple_repeat 2 41 0 2972 153 65 24 chr5 154423968 154424557 -48660975 + L1MA9 LINE L1 5661 6273 -39 1119 141 0 42 chr5 154424559 154424751 -48660781 - FRAM SINE Alu 0 176 1 496 351 57 13 chr5 154425062 154425290 -48660242 + MIR SINE MIR 12 249 -13 288 319 137 58 chr5 154425301 154425630 -48659902 + L2 LINE L2 2916 3270 -2 1543 237 62 6 chr5 154426207 154426709 -48658823 - L1MEc LINE L1 -5075 1321 792 481 257 28 0 chr5 154426711 154426855 -48658677 - L1MEc LINE L1 -6211 185 38 2016 131 21 3 chr5 154426911 154427194 -48658338 + AluSx SINE Alu 1 288 -24 2022 173 54 67 chr5 154427198 154427868 -48657664 + L1MC5 LINE L1 7207 7867 -94 297 294 35 0 chr5 154427939 154428024 -48657508 + MIR SINE MIR 44 131 -77 731 246 37 5 chr5 154428079 154428266 -48657266 + MIR SINE MIR 70 262 0 438 284 79 0 chr5 154428702 154428829 -48656703 + L2 LINE L2 3136 3272 0 1049 150 0 56 chr5 154429465 154429645 -48655887 + FAM SINE Alu 1 170 -5 25 65 0 0 chr5 154429762 154429808 -48655724 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 154430183 154430206 -48655326 + AT_rich Low_complexity Low_complexity 1 23 0 370 354 31 0 chr5 154430308 154430438 -48655094 - MIR3 SINE MIR -45 163 30 732 242 7 3 chr5 154430602 154430772 -48654760 + MIR SINE MIR 10 176 -62 370 266 43 72 chr5 154430770 154430909 -48654623 - L2 LINE L2 -1 3312 3178 * 284 254 0 0 chr5 154430911 154430970 -48654562 + MIR SINE MIR 200 258 -4 2007 148 0 7 chr5 154431017 154431308 -48654224 + AluJb SINE Alu 5 293 -19 25 0 0 0 chr5 154431589 154431614 -48653918 + AT_rich Low_complexity Low_complexity 1 25 0 3903 174 22 3 chr5 154431756 154432540 -48652992 + L1MB5 LINE L1 5368 6166 -8 1831 163 105 24 chr5 154432674 154433133 -48652399 + LTR54B LTR ERV1 1 496 -2 1084 182 129 42 chr5 154433173 154433553 -48651979 - LTR37A LTR ERV1 0 426 14 223 257 59 118 chr5 154433598 154433734 -48651798 + MIR3 SINE MIR 66 193 -15 721 131 284 38 chr5 154434337 154434520 -48651012 + MER46A DNA MER2_type 3 230 -6 2319 96 3 3 chr5 154435545 154435848 -48649684 + AluSq SINE Alu 1 303 -10 306 290 0 37 chr5 154438660 154438767 -48646765 + L1ME LINE L1 5338 5440 -681 23 33 0 0 chr5 154438850 154438880 -48646652 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 154439086 154439108 -48646424 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 154439944 154439965 -48645567 + AT_rich Low_complexity Low_complexity 1 21 0 249 286 63 40 chr5 154440585 154440711 -48644821 + L2 LINE L2 2695 2823 -491 353 203 274 105 chr5 154440786 154440939 -48644593 + MER5A DNA MER1_type 11 189 0 1908 107 3 57 chr5 154441033 154441364 -48644168 + AluSg SINE Alu 1 315 0 1635 142 48 4 chr5 154441410 154441678 -48643854 + AluJb SINE Alu 18 297 -15 394 59 162 0 chr5 154442510 154442578 -48642954 - L1PA16 LINE L1 -2 6164 6086 5933 55 1 0 chr5 154442989 154443721 -48641811 + L1PA7 LINE L1 5420 6152 -2 760 272 10 5 chr5 154443905 154444100 -48641432 + MIR SINE MIR 31 226 -36 1654 196 3 22 chr5 154444459 154444776 -48640756 + AluJo SINE Alu 1 311 -1 405 233 37 40 chr5 154445648 154445836 -48639696 + MLT1G LTR MaLR 185 359 -196 1020 181 12 0 chr5 154446957 154447128 -48638404 + FAM SINE Alu 1 173 -2 1249 163 0 31 chr5 154447279 154447506 -48638026 + AluJo SINE Alu 85 304 -8 30 0 0 0 chr5 154448405 154448435 -48637097 + AT_rich Low_complexity Low_complexity 1 30 0 276 300 200 20 chr5 154448658 154448808 -48636724 - MIR3 SINE MIR -13 195 19 639 220 0 0 chr5 154449519 154449637 -48635895 - L2 LINE L2 0 3313 3196 2459 53 3 3 chr5 154449649 154449952 -48635580 - AluY SINE Alu -8 303 1 407 349 41 29 chr5 154450181 154450353 -48635179 + MIR3 SINE MIR 26 199 -9 321 285 152 13 chr5 154450787 154450938 -48634594 - MIR SINE MIR 0 262 91 2165 141 0 6 chr5 154451717 154452030 -48633502 + AluSx SINE Alu 1 311 -1 2455 144 9 2 chr5 154452744 154453202 -48632330 + L1P LINE L1 4358 4818 -1328 5420 62 1 0 chr5 154453206 154453883 -48631649 + L1PA11 LINE L1 5497 6174 0 1074 170 69 64 chr5 154454033 154454221 -48631311 - Charlie5 DNA MER1_type -2 2622 2436 1958 125 7 43 chr5 154454221 154454525 -48631007 + AluSx SINE Alu 1 293 -19 1074 170 69 64 chr5 154454525 154454713 -48630819 - Charlie5 DNA MER1_type -188 2436 2244 34 55 0 0 chr5 154454717 154454772 -48630760 + AT_rich Low_complexity Low_complexity 1 55 0 2054 166 16 25 chr5 154454962 154455330 -48630202 + MLT1A1 LTR MaLR 1 365 0 2077 145 7 0 chr5 154455582 154455892 -48629640 + AluSx SINE Alu 1 312 0 27 62 0 0 chr5 154456990 154457038 -48628494 + AT_rich Low_complexity Low_complexity 1 48 0 269 247 134 21 chr5 154457483 154457580 -48627952 - MIR3 SINE MIR -30 178 71 315 268 58 80 chr5 154458432 154458570 -48626962 - MIR SINE MIR -62 146 18 2063 119 18 32 chr5 154458583 154458926 -48626606 + MER44D DNA MER2_type 2 609 0 430 279 71 26 chr5 154459876 154460030 -48625502 - MIR SINE MIR -70 192 32 394 316 61 0 chr5 154460403 154460517 -48625015 - MIR3 SINE MIR -46 162 42 463 289 8 8 chr5 154460904 154461025 -48624507 - L2 LINE L2 0 3313 3193 209 279 0 0 chr5 154461275 154461318 -48624214 - L2 LINE L2 -92 3221 3179 616 156 116 12 chr5 154461368 154461541 -48623991 - L1MA4 LINE L1 0 6300 6110 2188 114 3 7 chr5 154461545 154461851 -48623681 - AluSx SINE Alu -7 305 1 220 234 0 21 chr5 154462561 154462608 -48622924 - L2 LINE L2 -75 3238 3193 2118 139 3 22 chr5 154462738 154463055 -48622477 + AluSx SINE Alu 1 311 -1 2074 111 0 0 chr5 154463373 154463643 -48621889 + AluSx SINE Alu 1 270 -42 1830 96 4 20 chr5 154463719 154463969 -48621563 + AluSg SINE Alu 37 282 -28 315 0 0 0 chr5 154463969 154464004 -48621528 + (CA)n Simple_repeat Simple_repeat 2 36 0 2041 156 0 6 chr5 154464017 154464331 -48621201 + AluJb SINE Alu 1 312 0 735 222 7 7 chr5 154464354 154464507 -48621025 + FRAM SINE Alu 5 157 -9 332 216 153 27 chr5 154464631 154464742 -48620790 - L2 LINE L2 -10 3303 3179 278 287 27 60 chr5 154464775 154464830 -48620702 - MIR SINE MIR -71 191 136 1008 145 0 41 chr5 154464830 154465002 -48620530 - FRAM SINE Alu -1 165 1 278 287 27 60 chr5 154465002 154465096 -48620436 - MIR SINE MIR -126 136 47 1718 205 7 0 chr5 154466349 154466656 -48618876 + AluJo SINE Alu 1 309 -3 1018 185 11 109 chr5 154470173 154470438 -48615094 + AluJo SINE Alu 1 239 -73 369 0 0 0 chr5 154470455 154470496 -48615036 + (CA)n Simple_repeat Simple_repeat 2 42 0 361 325 64 6 chr5 154471480 154471637 -48613895 - L3b LINE CR1 -201 1382 1217 22 35 0 0 chr5 154471678 154471707 -48613825 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 154472242 154472263 -48613269 + AT_rich Low_complexity Low_complexity 1 21 0 442 152 13 0 chr5 154472301 154472380 -48613152 + MER116 DNA Mariner 1 80 0 272 281 70 47 chr5 154472960 154473088 -48612444 + MIR SINE MIR 23 153 -55 2043 100 10 61 chr5 154473416 154473727 -48611805 + AluSq SINE Alu 1 295 -18 2315 93 0 7 chr5 154474353 154474663 -48610869 + AluSx SINE Alu 1 308 -4 679 220 143 0 chr5 154475099 154475281 -48610251 + MER63A DNA MER1_type 1 208 -2 1903 177 12 0 chr5 154475323 154475668 -48609864 + L1PA16 LINE L1 5805 6153 -13 242 252 235 0 chr5 154475759 154475878 -48609654 - L3b LINE CR1 -199 1384 1238 2075 126 7 0 chr5 154476692 154476977 -48608555 + AluSx SINE Alu 1 287 -25 28 0 0 0 chr5 154476977 154477005 -48608527 + AT_rich Low_complexity Low_complexity 1 28 0 2522 69 0 0 chr5 154477255 154477560 -48607972 + AluY SINE Alu 1 305 -6 1922 91 102 14 chr5 154478383 154478658 -48606874 - AluSg SINE Alu -11 299 1 2227 102 3 0 chr5 154478711 154479014 -48606518 + AluSc SINE Alu 1 304 -5 1388 158 9 9 chr5 154479182 154479404 -48606128 - AluJb SINE Alu -90 222 1 246 356 26 17 chr5 154479538 154479653 -48605879 - L2 LINE L2 0 3313 3198 2382 75 0 38 chr5 154479685 154480005 -48605527 - AluY SINE Alu -3 308 1 188 217 196 54 chr5 154480196 154480288 -48605244 + L2 LINE L2 3121 3225 -47 1714 113 5 0 chr5 154481552 154481773 -48603759 + AluSx SINE Alu 1 222 -90 1035 103 0 7 chr5 154481861 154482006 -48603526 - AluSg/x SINE Alu -7 303 160 357 74 19 0 chr5 154482008 154482062 -48603470 + AluSp/q SINE Alu 240 294 -9 820 254 57 5 chr5 154482367 154482560 -48602972 + MIR SINE MIR 2 204 -58 1090 134 8 6 chr5 154482622 154482868 -48602664 - AluJb SINE Alu -16 296 1 201 175 0 0 chr5 154483919 154483959 -48601573 + (TA)n Simple_repeat Simple_repeat 2 41 0 1753 169 3 27 chr5 154484234 154484529 -48601003 + AluJo SINE Alu 1 288 -24 1052 135 139 14 chr5 154484742 154484950 -48600582 + MER46A DNA MER2_type 1 234 -2 265 305 11 98 chr5 154485419 154485593 -48599939 - MIR SINE MIR -64 198 40 2190 122 10 10 chr5 154485659 154485970 -48599562 + AluSx SINE Alu 1 311 -1 26 30 0 0 chr5 154486502 154486535 -48598997 + AT_rich Low_complexity Low_complexity 1 33 0 28 29 0 0 chr5 154487664 154487699 -48597833 + AT_rich Low_complexity Low_complexity 1 35 0 594 157 19 9 chr5 154488364 154488472 -48597060 + FLAM_A SINE Alu 21 129 -13 287 299 122 27 chr5 154489174 154489363 -48596169 + MIR SINE MIR 2 207 -55 2454 48 0 0 chr5 154490171 154490460 -48595072 + AluSc SINE Alu 1 289 -20 1085 152 6 6 chr5 154491481 154491652 -48593880 + AluJb SINE Alu 130 300 -12 247 231 143 0 chr5 154491707 154491798 -48593734 - L1ME4a LINE L1 -9 6112 6009 2058 95 51 7 chr5 154491857 154492152 -48593380 - AluSx SINE Alu -4 308 1 267 277 29 68 chr5 154492154 154492336 -48593196 - MIR SINE MIR -5 257 2 27 62 0 0 chr5 154492512 154492560 -48592972 + AT_rich Low_complexity Low_complexity 1 48 0 240 184 0 41 chr5 154492833 154492882 -48592650 + L2 LINE L2 3267 3313 0 23 24 0 24 chr5 154492972 154492994 -48592538 + AT_rich Low_complexity Low_complexity 1 23 -17 1633 103 162 4 chr5 154492994 154493247 -48592285 + AluSq SINE Alu 1 293 -10 23 24 0 24 chr5 154493247 154493265 -48592267 + AT_rich Low_complexity Low_complexity 23 40 0 27 29 0 0 chr5 154493447 154493481 -48592051 + AT_rich Low_complexity Low_complexity 1 34 0 182 290 258 0 chr5 154493661 154493754 -48591778 - L2 LINE L2 -216 3056 2940 393 218 13 0 chr5 154494282 154494360 -48591172 + MIR SINE MIR 174 252 -10 2044 136 0 13 chr5 154495354 154495662 -48589870 + AluJo SINE Alu 1 304 -8 1954 164 0 0 chr5 154495776 154496063 -48589469 + AluSx SINE Alu 13 299 -13 2365 90 0 3 chr5 154496063 154496362 -48589170 + AluSq SINE Alu 1 298 -15 663 212 124 51 chr5 154496428 154496575 -48588957 - HAL1 LINE L1 -85 2422 2287 1739 187 7 10 chr5 154496575 154496880 -48588652 - AluJo SINE Alu -8 304 1 663 212 124 51 chr5 154496880 154497104 -48588428 - HAL1 LINE L1 -220 2287 2024 1950 139 7 0 chr5 154497195 154497525 -48588007 - AluJb SINE Alu 0 332 1 2259 110 0 0 chr5 154498138 154498429 -48587103 - AluSx SINE Alu -15 297 7 897 207 6 0 chr5 154498715 154498879 -48586653 - FAM SINE Alu -13 172 8 963 164 17 45 chr5 154498893 154499070 -48586462 - FRAM SINE Alu -13 163 1 2108 131 6 6 chr5 154499273 154499585 -48585947 - AluJb SINE Alu 0 312 1 11345 120 83 53 chr5 154499971 154501024 -48584508 + Tigger2 DNA MER2_type 1 1021 -1697 2307 106 6 0 chr5 154501024 154501335 -48584197 + AluSp SINE Alu 1 313 0 11345 120 83 53 chr5 154501335 154502709 -48582823 + Tigger2 DNA MER2_type 1021 2493 -225 309 102 0 0 chr5 154502702 154502751 -48582781 - Alu SINE Alu -12 289 241 * 253 200 53 13 chr5 154503049 154503124 -48582408 + MLT1K LTR MaLR 511 588 0 236 196 54 0 chr5 154503155 154503211 -48582321 - MLT1H LTR MaLR 0 549 491 314 305 62 53 chr5 154503322 154503548 -48581984 - MLT1H LTR MaLR -240 309 82 2237 103 6 13 chr5 154503911 154504223 -48581309 - AluSx SINE Alu -2 310 1 2124 117 48 0 chr5 154504583 154504941 -48580591 + L1PA13 LINE L1 5786 6160 -3 1483 151 50 19 chr5 154508201 154508460 -48577072 + AluJb SINE Alu 1 267 -45 2294 94 0 10 chr5 154508473 154508770 -48576762 + AluSx SINE Alu 1 294 -18 1294 143 72 18 chr5 154509272 154509495 -48576037 - AluJo SINE Alu -77 235 1 1977 138 34 7 chr5 154509706 154510002 -48575530 - AluJo SINE Alu -8 304 1 1636 172 25 14 chr5 154510113 154510392 -48575140 + AluJo SINE Alu 1 282 -30 281 26 0 26 chr5 154510395 154510434 -48575098 + (TAA)n Simple_repeat Simple_repeat 2 39 0 2352 89 3 22 chr5 154510649 154510965 -48574567 + AluSx SINE Alu 1 310 -2 3308 144 16 3 chr5 154511108 154511679 -48573853 - L1MB3 LINE L1 -3 6180 5603 5100 140 52 11 chr5 154511684 154512524 -48573008 - L1MA9 LINE L1 -4 6308 5423 2227 123 0 0 chr5 154512524 154512825 -48572707 - AluSx SINE Alu -11 301 1 5100 140 52 11 chr5 154512825 154512947 -48572585 - L1MA9 LINE L1 -889 5423 5307 1795 100 4 0 chr5 154512947 154513186 -48572346 - AluSp SINE Alu -6 307 68 1049 81 0 15 chr5 154513188 154513324 -48572208 - AluSq/x SINE Alu -179 134 1 1949 153 13 7 chr5 154513324 154513632 -48571900 - AluJb SINE Alu -2 310 1 1456 112 0 10 chr5 154513640 154513836 -48571696 - AluSg/x SINE Alu -14 298 105 771 184 0 22 chr5 154513863 154513999 -48571533 - FLAM_A SINE Alu 0 133 1 1675 194 6 16 chr5 154514005 154514320 -48571212 - AluJb SINE Alu 0 312 1 3831 159 52 8 chr5 154514320 154514363 -48571169 - L1MA9 LINE L1 -1763 4383 4343 1373 153 8 4 chr5 154514363 154514598 -48570934 + MER46A DNA MER2_type 1 236 0 3831 159 52 8 chr5 154514598 154515341 -48570191 - L1MA9 LINE L1 -1803 4343 3562 836 153 60 0 chr5 154515343 154515526 -48570006 - L1MA9 LINE L1 -2461 3685 3492 2146 85 7 0 chr5 154515543 154515814 -48569718 - AluSg SINE Alu -1 309 37 4756 123 53 82 chr5 154515824 154516167 -48569365 - L1M4c LINE L1 -4317 2067 1716 836 158 0 8 chr5 154516167 154516300 -48569232 - FLAM_C SINE Alu 0 133 2 4756 123 53 82 chr5 154516300 154516315 -48569217 - L1M4c LINE L1 -4668 1716 1702 1625 126 0 5 chr5 154516315 154516530 -48569002 - AluSg/x SINE Alu -20 292 79 4756 123 53 82 chr5 154516530 154516599 -48568933 - L1M4c LINE L1 -4682 1702 1633 2102 152 3 0 chr5 154516599 154516908 -48568624 - AluSg SINE Alu 0 310 1 4756 123 53 82 chr5 154516908 154517289 -48568243 - L1M4c LINE L1 -4751 1633 1242 2026 129 3 10 chr5 154517289 154517591 -48567941 - AluSx SINE Alu -8 304 5 4756 123 53 82 chr5 154517591 154517986 -48567546 - L1M4c LINE L1 -5142 1242 800 576 171 9 0 chr5 154518095 154518200 -48567332 + AluJo SINE Alu 29 134 -178 3681 181 37 24 chr5 154518211 154518991 -48566541 - L1M4c LINE L1 -5592 792 3 354 23 0 0 chr5 154519076 154519119 -48566413 + (TG)n Simple_repeat Simple_repeat 2 44 0 1945 125 0 18 chr5 154520059 154520339 -48565193 + AluSq SINE Alu 18 292 -21 2338 92 0 3 chr5 154520603 154520898 -48564634 + AluSg SINE Alu 1 294 -16 2129 114 13 7 chr5 154521205 154521504 -48564028 + AluSx SINE Alu 1 301 -11 1953 164 0 0 chr5 154522583 154522882 -48562650 + AluSx SINE Alu 1 299 -13 2205 118 3 13 chr5 154523128 154523443 -48562089 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 154523446 154523470 -48562062 + AT_rich Low_complexity Low_complexity 1 24 0 197 33 33 0 chr5 154525304 154525334 -48560198 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 744 77 154 0 chr5 154525336 154525440 -48560092 - AluSq/x SINE Alu -192 120 1 1355 184 110 19 chr5 154526610 154526861 -48558671 + L1MC4 LINE L1 6488 6715 -1178 1158 170 96 5 chr5 154526861 154527079 -48558453 - MER8 DNA MER2_type 0 239 2 1355 184 110 19 chr5 154527079 154527254 -48558278 + L1MC4 LINE L1 6715 7057 -836 1860 226 93 9 chr5 154527269 154527849 -48557683 + L1MC4 LINE L1 7283 7911 -131 575 129 0 0 chr5 154527891 154527976 -48557556 - AluSg SINE Alu -164 146 62 379 116 0 2 chr5 154528003 154528068 -48557464 + AluS SINE Alu 1 57 -246 409 255 138 15 chr5 154528194 154528390 -48557142 + HAL1b LINE L1 426 645 -703 895 75 108 0 chr5 154528397 154528517 -48557015 + AluJb SINE Alu 1 133 -179 1838 144 4 4 chr5 154528577 154528855 -48556677 - AluJb SINE Alu -32 280 3 692 164 0 33 chr5 154528877 154528999 -48556533 - FLAM_C SINE Alu -15 118 1 581 218 55 12 chr5 154529000 154529165 -48556367 + MER104 DNA Tc2 4 175 -5 2360 88 3 0 chr5 154529305 154529600 -48555932 + AluSp SINE Alu 1 296 -17 324 0 0 0 chr5 154529661 154529697 -48555835 + (A)n Simple_repeat Simple_repeat 1 36 0 267 155 211 14 chr5 154529802 154529873 -48555659 + HAL1b LINE L1 498 582 -766 633 303 89 46 chr5 154530309 154530528 -48555004 + L1M4 LINE L1 2675 2883 -3263 2230 88 30 14 chr5 154530528 154530824 -48554708 + AluSg SINE Alu 1 301 -9 633 303 89 46 chr5 154530824 154531440 -48554092 + L1M4 LINE L1 2883 3598 -2548 299 296 112 29 chr5 154531566 154531772 -48553760 + L1M4 LINE L1 3727 3949 -2197 316 296 152 47 chr5 154531883 154532215 -48553317 + L1M4 LINE L1 4119 4493 -1653 2128 96 41 7 chr5 154532215 154532507 -48553025 + AluSq SINE Alu 3 304 -9 316 296 152 47 chr5 154532507 154532536 -48552996 + L1M4 LINE L1 4493 4518 -1628 486 271 158 15 chr5 154532543 154532816 -48552716 - LTR50 LTR ERVL -5 790 479 1199 145 53 18 chr5 154532820 154533047 -48552485 - MER46A DNA MER2_type -1 235 1 216 191 0 0 chr5 154533157 154533204 -48552328 + A-rich Low_complexity Low_complexity 1 47 0 1138 273 80 15 chr5 154533621 154534097 -48551435 - ERVL LTR ERVL -341 5423 4917 1681 113 7 69 chr5 154534664 154534955 -48550577 + AluSx SINE Alu 1 273 -39 496 126 23 0 chr5 154534955 154535042 -48550490 + AluSg/x SINE Alu 218 306 -6 2400 77 0 0 chr5 154536594 154536892 -48548640 - AluY SINE Alu -13 298 1 2240 90 0 10 chr5 154541045 154541345 -48544187 - AluY SINE Alu -14 297 1 532 270 113 0 chr5 154542239 154542398 -48543134 + MER5B DNA MER1_type 2 178 0 1462 197 16 10 chr5 154542495 154542800 -48542732 - AluJo SINE Alu -5 307 1 345 161 126 63 chr5 154543480 154543602 -48541930 + HsTC2 DNA Tc2 1650 1788 -110 2070 103 7 3 chr5 154543602 154543892 -48541640 + AluY SINE Alu 1 291 -20 345 161 126 63 chr5 154543892 154543943 -48541589 + HsTC2 DNA Tc2 1788 1834 -64 2066 167 38 5 chr5 154543990 154544409 -48541123 - L1MB7 LINE L1 0 6184 5752 3134 142 18 16 chr5 154544409 154544623 -48540909 + L1PA16 LINE L1 5615 5827 -339 2242 101 24 0 chr5 154544623 154544920 -48540612 + AluSg1 SINE Alu 1 304 -5 3134 142 18 16 chr5 154544920 154545256 -48540276 + L1PA16 LINE L1 5827 6166 0 422 280 74 29 chr5 154545658 154545873 -48539659 + MIR SINE MIR 14 235 -27 219 140 0 0 chr5 154546456 154546506 -48539026 + (A)n Simple_repeat Simple_repeat 1 50 0 550 238 48 36 chr5 154546711 154546879 -48538653 + MIR SINE MIR 90 259 -3 357 206 278 0 chr5 154547602 154547699 -48537833 + FLAM_C SINE Alu 1 124 -9 2226 100 3 13 chr5 154547720 154548021 -48537511 - AluSx SINE Alu -14 298 1 196 191 0 0 chr5 154548327 154548369 -48537163 - MIR SINE MIR -68 194 153 258 32 0 0 chr5 154548537 154548568 -48536964 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1424 175 56 8 chr5 154548568 154548819 -48536713 - AluJo SINE Alu -39 273 11 1676 184 0 28 chr5 154549491 154549633 -48535899 + AluJb SINE Alu 1 145 -167 2080 104 3 63 chr5 154549633 154549949 -48535583 + AluSx SINE Alu 1 297 -15 1676 184 0 28 chr5 154549949 154550126 -48535406 + AluJb SINE Alu 145 311 -1 645 326 160 24 chr5 154550148 154550657 -48534875 - L2 LINE L2 -17 3296 2729 928 142 7 0 chr5 154550671 154550812 -48534720 - AluJb SINE Alu -15 297 156 242 290 86 32 chr5 154550817 154550910 -48534622 - L2 LINE L2 -600 2714 2617 2057 123 13 10 chr5 154551059 154551368 -48534164 + AluJb SINE Alu 1 310 -2 483 281 9 9 chr5 154551388 154551502 -48534030 + L2 LINE L2 3178 3291 -22 1553 226 3 7 chr5 154551510 154551807 -48533725 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr5 154551807 154551829 -48533703 + AT_rich Low_complexity Low_complexity 1 22 0 2135 137 0 6 chr5 154551829 154552143 -48533389 + AluSx SINE Alu 1 312 0 21 36 0 0 chr5 154552200 154552228 -48533304 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr5 154552705 154552730 -48532802 + AT_rich Low_complexity Low_complexity 1 25 0 219 287 50 30 chr5 154552980 154553081 -48532451 - MIR SINE MIR -147 115 13 321 93 0 0 chr5 154554176 154554230 -48531302 - AluSp/q SINE Alu 0 303 250 261 139 0 0 chr5 154554622 154554665 -48530867 + (CATA)n Simple_repeat Simple_repeat 1 43 0 1868 146 3 30 chr5 154554751 154555053 -48530479 - AluJb SINE Alu -18 294 1 22 0 0 0 chr5 154555493 154555515 -48530017 + AT_rich Low_complexity Low_complexity 1 22 0 2174 103 0 0 chr5 154555757 154556062 -48529470 - AluSx SINE Alu 0 306 2 2406 82 7 0 chr5 154557392 154557696 -48527836 + AluSp SINE Alu 1 306 -7 421 274 73 34 chr5 154558867 154559071 -48526461 - L1MC4 LINE L1 -1 8041 7830 240 212 91 0 chr5 154559134 154559200 -48526332 - L1ME2 LINE L1 -21 6143 6072 255 31 0 0 chr5 154561443 154561475 -48524057 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1499 169 93 40 chr5 154563247 154563720 -48521812 + Charlie1 DNA MER1_type 2264 2761 0 1647 154 35 55 chr5 154563759 154564103 -48521429 + MER1B DNA MER1_type 1 337 0 28 29 0 0 chr5 154564166 154564201 -48521331 + AT_rich Low_complexity Low_complexity 1 35 0 1233 122 39 164 chr5 154564201 154564536 -48520996 - AluYb8 SINE Alu -15 293 1 2148 130 0 0 chr5 154564563 154564856 -48520676 + AluSx SINE Alu 1 293 -19 2010 134 7 13 chr5 154565009 154565307 -48520225 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr5 154565307 154565328 -48520204 + AT_rich Low_complexity Low_complexity 1 21 0 212 250 0 0 chr5 154565451 154565499 -48520033 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1145 139 110 22 chr5 154566266 154566279 -48519253 + L1MC/D LINE L1 5258 5268 -1076 2417 77 13 0 chr5 154566279 154566577 -48518955 + AluSx SINE Alu 1 302 -10 360 0 0 0 chr5 154566584 154566624 -48518908 + (TA)n Simple_repeat Simple_repeat 1 40 0 * 651 26 0 0 chr5 154566623 154566700 -48518832 + (GA)n Simple_repeat Simple_repeat 2 78 0 1145 139 110 22 chr5 154566624 154566951 -48518581 + L1MC/D LINE L1 5273 5554 -790 257 260 53 53 chr5 154567035 154567185 -48518347 + L1P LINE L1 4885 5034 -1112 2188 116 0 10 chr5 154567404 154567715 -48517817 + AluSg1 SINE Alu 1 308 -1 1701 197 0 3 chr5 154567781 154568071 -48517461 + AluJb SINE Alu 11 299 -13 2444 71 7 0 chr5 154568102 154568396 -48517136 + AluSg SINE Alu 1 296 -14 1197 153 10 36 chr5 154568424 154568620 -48516912 + AluSg/x SINE Alu 112 302 -10 40700 33 23 2 chr5 154568757 154574784 -48510748 + L1PA3 LINE L1 1 6155 0 1472 201 26 21 chr5 154574947 154575286 -48510246 + MER58B DNA MER1_type 1 341 0 2239 56 76 0 chr5 154576144 154576432 -48509100 - AluY SINE Alu -1 310 1 8130 73 4 11 chr5 154576721 154577800 -48507732 + MER11C LTR ERVK 1 1071 0 243 114 0 0 chr5 154577820 154577855 -48507677 - Alu SINE Alu -132 171 137 626 268 66 39 chr5 154578301 154578633 -48506899 - L1ME4a LINE L1 -295 5826 5486 2266 108 0 0 chr5 154579191 154579486 -48506046 - AluSx SINE Alu -13 299 5 2001 138 0 31 chr5 154580057 154580376 -48505156 + AluSp SINE Alu 1 309 -4 2268 103 10 0 chr5 154580613 154580915 -48504617 - AluJb SINE Alu -7 305 1 235 159 0 159 chr5 154580927 154580990 -48504542 - L2 LINE L2 -5 3308 3256 183 194 83 0 chr5 154580962 154580998 -48504534 - MIR SINE MIR -24 238 200 * 322 272 109 11 chr5 154580997 154581089 -48504443 - L2 LINE L2 -10 3303 3203 1415 183 3 82 chr5 154581089 154581406 -48504126 - AluJb SINE Alu -13 299 8 488 246 0 18 chr5 154581456 154581570 -48503962 + AluSq SINE Alu 118 229 -84 273 130 0 0 chr5 154582007 154582053 -48503479 + Alu SINE Alu 241 286 -15 * 1563 168 51 17 chr5 154582049 154582401 -48503131 - Tigger2 DNA MER2_type -225 2493 2130 1608 153 0 17 chr5 154582518 154582759 -48502773 - AluSx SINE Alu -75 237 1 377 228 0 0 chr5 154582760 154582839 -48502693 - L1ME2 LINE L1 -312 5852 5774 792 240 18 9 chr5 154582840 154583065 -48502467 - L1ME2 LINE L1 -1842 4304 4078 453 208 0 0 chr5 154583061 154583167 -48502365 - L1ME LINE L1 -394 5770 5665 * 1124 133 77 10 chr5 154583484 154583680 -48501852 - MER46A DNA MER2_type -2 234 26 319 268 21 21 chr5 154583698 154583795 -48501737 - MIR SINE MIR -116 146 50 879 209 31 0 chr5 154583800 154583991 -48501541 + Tigger3(Golem) DNA MER2_type 8 204 -2825 1556 124 100 8 chr5 154584106 154584365 -48501167 + AluSx SINE Alu 25 307 -5 1365 237 94 34 chr5 154584372 154585055 -48500477 + L1ME2 LINE L1 4478 5201 -945 288 0 0 0 chr5 154585314 154585346 -48500186 + (A)n Simple_repeat Simple_repeat 1 32 0 28 0 0 0 chr5 154585436 154585464 -48500068 + AT_rich Low_complexity Low_complexity 1 28 0 342 211 0 0 chr5 154586306 154586377 -48499155 + AluS SINE Alu 228 298 -2 661 212 152 30 chr5 154586384 154586648 -48498884 + L1ME2 LINE L1 5861 6156 -8 22 35 0 0 chr5 154587405 154587434 -48498098 + AT_rich Low_complexity Low_complexity 1 29 0 765 201 181 12 chr5 154587843 154588102 -48497430 + L1P LINE L1 3527 3829 -2317 249 172 69 0 chr5 154590449 154590507 -48495025 + MLT1H1 LTR MaLR 463 524 -31 400 132 0 15 chr5 154590509 154590577 -48494955 + Tigger2 DNA MER2_type 3 69 -2649 * 2155 144 11 52 chr5 154590560 154591024 -48494508 + Tigger2 DNA MER2_type 2267 2711 -7 321 93 0 0 chr5 154591665 154591719 -48493813 + AluSp/q SINE Alu 250 303 0 217 318 132 16 chr5 154592571 154592700 -48492832 + MIR SINE MIR 108 251 -11 381 139 13 0 chr5 154594022 154594101 -48491431 + L1PB2 LINE L1 6072 6151 0 30 27 0 0 chr5 154594207 154594244 -48491288 + AT_rich Low_complexity Low_complexity 1 37 0 1387 154 42 12 chr5 154594244 154594503 -48491029 - L1PA10 LINE L1 -6 6162 5896 5141 120 17 2 chr5 154595813 154596728 -48488804 + L1PB2 LINE L1 5150 6074 -77 209 231 0 0 chr5 154596888 154596927 -48488605 + A-rich Low_complexity Low_complexity 2 40 0 2321 96 0 0 chr5 154597086 154597378 -48488154 - AluY SINE Alu -19 292 1 416 35 17 0 chr5 154597433 154597491 -48488041 + (TG)n Simple_repeat Simple_repeat 1 59 0 360 0 0 0 chr5 154598162 154598202 -48487330 + (TG)n Simple_repeat Simple_repeat 2 41 0 1427 179 64 50 chr5 154598203 154598483 -48487049 - AluJo SINE Alu -25 287 4 544 253 139 37 chr5 154599475 154599720 -48485812 - L2 LINE L2 -21 3292 3023 2453 57 0 32 chr5 154600545 154600859 -48484673 + AluSx SINE Alu 1 304 -8 1242 76 0 0 chr5 154600861 154601018 -48484514 + AluSg/x SINE Alu 137 293 -17 2312 98 0 0 chr5 154601018 154601313 -48484219 + AluSx SINE Alu 1 295 -17 252 181 0 101 chr5 154601867 154602016 -48483516 - AluY SINE Alu -163 138 5 211 356 53 0 chr5 154602680 154602812 -48482720 + MIR SINE MIR 92 230 -32 279 0 0 0 chr5 154603467 154603498 -48482034 + (CA)n Simple_repeat Simple_repeat 2 32 0 922 180 22 28 chr5 154603578 154603756 -48481776 + AluJo SINE Alu 1 177 -135 1517 184 14 18 chr5 154603583 154603860 -48481672 + AluJb SINE Alu 7 282 -30 868 172 33 0 chr5 154604389 154604569 -48480963 + L1M4 LINE L1 5594 5779 -405 2285 83 7 7 chr5 154604569 154604870 -48480662 + AluSp SINE Alu 1 301 -12 212 157 20 59 chr5 154604887 154604938 -48480594 + MIR SINE MIR 109 157 -105 343 68 0 0 chr5 154605082 154605126 -48480406 - L1P LINE L1 -3586 2560 2517 10020 99 2 0 chr5 154605126 154607325 -48478207 + L1PA6 LINE L1 3935 6141 -13 593 232 75 75 chr5 154607339 154607701 -48477831 + L1M4 LINE L1 4416 4777 -1369 * 1027 229 4 0 chr5 154607698 154607951 -48477581 - L1P LINE L1 -872 5274 5021 241 149 0 21 chr5 154608261 154608308 -48477224 - MIR SINE MIR -40 222 177 * 1003 301 124 22 chr5 154608306 154609041 -48476491 - L2 LINE L2 0 3313 2503 329 211 44 18 chr5 154609123 154609237 -48476295 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 456 333 85 0 chr5 154610606 154610795 -48474737 + MIR SINE MIR 3 207 -55 491 161 69 0 chr5 154661049 154661136 -48424396 - AluJo SINE Alu -176 136 44 2201 131 0 0 chr5 154661143 154661455 -48424077 - AluSx SINE Alu 0 312 1 1215 225 92 48 chr5 154661752 154662206 -48423326 - L1ME3A LINE L1 0 6170 5697 861 201 0 0 chr5 154662208 154662352 -48423180 - FRAM SINE Alu -34 142 1 1245 163 175 0 chr5 154662358 154662610 -48422922 - AluJb SINE Alu -16 296 1 279 289 13 0 chr5 154663065 154663141 -48422391 - HAL1 LINE L1 -937 1570 1494 1443 93 0 0 chr5 154663173 154663355 -48422177 - AluSg/x SINE Alu -2 308 127 864 172 11 48 chr5 154663473 154663659 -48421873 + MER3 DNA MER1_type 1 179 -30 1321 164 168 16 chr5 154663659 154663915 -48421617 + AluJb SINE Alu 1 295 -7 259 254 5 111 chr5 154663915 154663963 -48421569 - MER3 DNA MER1_type -117 92 41 2012 135 3 3 chr5 154663977 154664265 -48421267 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr5 154664268 154664299 -48421233 + AT_rich Low_complexity Low_complexity 1 31 0 292 212 212 25 chr5 154664337 154664455 -48421077 + L1ME LINE L1 5529 5668 -453 27 0 0 0 chr5 154664589 154664616 -48420916 + AT_rich Low_complexity Low_complexity 1 27 0 2540 53 3 0 chr5 154664940 154665244 -48420288 - AluY SINE Alu -6 305 1 255 224 92 26 chr5 154665415 154665491 -48420041 + L1ME LINE L1 5539 5619 -502 1749 165 0 7 chr5 154667214 154667493 -48418039 + AluJb SINE Alu 10 286 -26 403 276 169 18 chr5 154667501 154667726 -48417806 + MIR SINE MIR 3 261 -1 1971 147 13 0 chr5 154667908 154668214 -48417318 + AluSx SINE Alu 1 310 -2 2142 117 10 0 chr5 154668569 154668867 -48416665 + AluSx SINE Alu 1 301 -11 329 153 0 0 chr5 154669025 154669084 -48416448 - Alu SINE Alu -1 300 242 570 154 0 87 chr5 154669203 154669352 -48416180 + FLAM_C SINE Alu 5 140 -3 1259 223 65 13 chr5 154669353 154669663 -48415869 + L1M4 LINE L1 4582 4907 -1239 437 202 115 10 chr5 154669664 154669768 -48415764 + MER47A DNA MER2_type 4 118 -248 1314 153 47 17 chr5 154669770 154670006 -48415526 - AluJo SINE Alu -16 296 54 743 214 8 0 chr5 154670030 154670156 -48415376 - FLAM_A SINE Alu -6 127 1 1325 105 15 5 chr5 154670189 154670389 -48415143 + MER47A DNA MER2_type 165 366 0 1273 186 73 92 chr5 154670392 154670664 -48414868 + L1M4 LINE L1 4911 5187 -959 2375 65 3 16 chr5 154670664 154670971 -48414561 + AluY SINE Alu 1 303 -8 1459 182 35 11 chr5 154670972 154671258 -48414274 + AluJo SINE Alu 1 293 -19 1273 186 73 92 chr5 154671258 154671407 -48414125 + L1M4 LINE L1 5186 5326 -820 969 133 7 0 chr5 154671414 154671557 -48413975 + AluSp/q SINE Alu 170 313 0 1707 159 16 29 chr5 154671567 154671704 -48413828 + AluSx SINE Alu 1 138 -174 2007 141 26 7 chr5 154671704 154672009 -48413523 + AluSx SINE Alu 1 311 -1 1707 159 16 29 chr5 154672009 154672185 -48413347 + AluSx SINE Alu 138 310 -2 2273 108 7 0 chr5 154672425 154672730 -48412802 + AluSg SINE Alu 3 309 -1 2184 90 17 3 chr5 154673095 154673385 -48412147 + AluSp SINE Alu 1 294 -19 775 246 181 92 chr5 154673412 154674369 -48411163 + L1MC4a LINE L1 5153 5398 -748 2375 73 0 0 chr5 154674405 154674692 -48410840 + AluSx SINE Alu 3 289 -23 1674 143 86 4 chr5 154674912 154675192 -48410340 - AluJo SINE Alu -9 303 1 434 243 262 20 chr5 154675401 154675603 -48409929 - MIR SINE MIR -6 256 6 1601 137 107 19 chr5 154675675 154675946 -48409586 - AluJb SINE Alu -17 295 1 1567 206 103 32 chr5 154676204 154676640 -48408892 + MLT1C LTR MaLR 1 467 0 180 111 0 0 chr5 154676666 154676693 -48408839 + (A)n Simple_repeat Simple_repeat 1 27 0 339 25 0 0 chr5 154676899 154676939 -48408593 + (GA)n Simple_repeat Simple_repeat 2 41 0 1933 128 54 10 chr5 154676948 154677244 -48408288 - AluSx SINE Alu -3 309 1 213 39 0 0 chr5 154677375 154677401 -48408131 + (TA)n Simple_repeat Simple_repeat 2 27 0 1017 166 51 0 chr5 154677401 154677558 -48407974 - FRAM SINE Alu -1 165 1 1243 194 4 0 chr5 154677747 154677995 -48407537 + L1 LINE L1 4523 4771 -1375 691 191 0 34 chr5 154678131 154678278 -48407254 - MIR SINE MIR 0 262 121 453 220 141 25 chr5 154678278 154678420 -48407112 + L1ME1 LINE L1 6024 6334 0 2022 135 0 10 chr5 154678430 154678742 -48406790 + AluJb SINE Alu 1 309 -3 2078 118 7 0 chr5 154678744 154679072 -48406460 + AluSx SINE Alu 1 330 0 834 194 62 0 chr5 154679072 154679216 -48406316 + AluJo/FRAM SINE Alu 135 287 -25 1884 141 123 21 chr5 154679793 154680133 -48405399 + THE1C LTR MaLR 1 375 0 962 136 0 0 chr5 154680686 154680818 -48404714 + AluSq/x SINE Alu 1 132 -181 2132 105 0 10 chr5 154680821 154681125 -48404407 + AluSx SINE Alu 1 301 -11 282 297 58 23 chr5 154681228 154681394 -48404138 - MIR3 SINE MIR -58 150 8 1838 143 7 7 chr5 154682336 154682623 -48402909 - AluJo SINE Alu -12 300 14 319 68 0 136 chr5 154682764 154682823 -48402709 + AluSp/q SINE Alu 244 294 -9 1942 134 10 0 chr5 154682846 154683136 -48402396 + AluSx SINE Alu 6 298 -14 2119 105 20 0 chr5 154683495 154683789 -48401743 + AluSx SINE Alu 1 300 -12 249 238 0 50 chr5 154685168 154685269 -48400263 + (CGGGG)n Simple_repeat Simple_repeat 2 97 0 346 227 268 0 chr5 154686381 154686478 -48399054 - L2 LINE L2 0 3313 3191 1873 157 6 6 chr5 154687109 154687421 -48398111 - AluJb SINE Alu 0 312 1 481 213 9 28 chr5 154688217 154688325 -48397207 + MER91B DNA MER1_type 25 130 -60 261 340 62 10 chr5 154688336 154688433 -48397099 + MER91B DNA MER1_type 89 190 0 227 107 268 0 chr5 154688904 154688960 -48396572 + MER20 DNA MER1_type 1 71 -148 562 167 83 0 chr5 154689008 154689116 -48396416 + MER20 DNA MER1_type 58 174 -45 373 301 40 1 chr5 154689981 154690099 -48395433 + MIR SINE MIR 40 162 -46 361 180 0 0 chr5 154690908 154690969 -48394563 - L2 LINE L2 0 3313 3253 1510 176 68 0 chr5 154691568 154691846 -48393686 - AluJo SINE Alu -15 297 1 2409 82 7 0 chr5 154692095 154692398 -48393134 + AluSg SINE Alu 1 305 -5 2156 99 13 13 chr5 154692398 154692702 -48392830 + AluSg SINE Alu 1 304 -6 365 169 0 13 chr5 154692702 154692779 -48392753 + L1M4 LINE L1 1543 1720 -4914 286 69 0 5 chr5 154692883 154692929 -48392603 + Alu SINE Alu 1 37 -266 1335 141 34 0 chr5 154693047 154693281 -48392251 - AluSx SINE Alu -70 242 1 817 185 0 0 chr5 154693324 154693459 -48392073 + AluJo SINE Alu 1 135 -177 216 0 0 0 chr5 154693958 154693982 -48391550 + (A)n Simple_repeat Simple_repeat 1 24 0 275 333 19 0 chr5 154694228 154694333 -48391199 + MIR SINE MIR 81 187 -75 2444 57 7 3 chr5 154694418 154694718 -48390814 - AluY SINE Alu -10 301 1 26 30 0 0 chr5 154694727 154694760 -48390772 + AT_rich Low_complexity Low_complexity 1 33 0 201 74 0 0 chr5 154695212 154695239 -48390293 + (T)n Simple_repeat Simple_repeat 1 27 0 1928 146 3 0 chr5 154695932 154696220 -48389312 + AluSx SINE Alu 11 299 -13 2478 77 0 0 chr5 154696220 154696518 -48389014 + AluY SINE Alu 1 298 -13 1660 166 28 14 chr5 154696948 154697237 -48388295 - AluJb SINE Alu -19 293 1 427 187 0 130 chr5 154697237 154697294 -48388238 + L2 LINE L2 3207 3241 -72 1815 151 154 0 chr5 154697294 154697586 -48387946 + MER1B DNA MER1_type 1 337 0 427 187 0 130 chr5 154697586 154697651 -48387881 + L2 LINE L2 3241 3313 0 576 179 134 8 chr5 154698104 154698238 -48387294 + MER20 DNA MER1_type 68 218 -1 21 36 0 0 chr5 154698388 154698416 -48387116 + AT_rich Low_complexity Low_complexity 1 28 0 2162 137 0 0 chr5 154698420 154698726 -48386806 + AluSx SINE Alu 1 306 -6 1679 147 6 86 chr5 154699324 154699638 -48385894 + AluJo SINE Alu 1 289 -23 21 0 0 0 chr5 154699753 154699774 -48385758 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 154701860 154701884 -48383648 + AT_rich Low_complexity Low_complexity 1 24 0 2451 57 3 3 chr5 154702682 154702978 -48382554 - AluY SINE Alu -15 296 1 2081 121 7 0 chr5 154703061 154703358 -48382174 - AluSq SINE Alu -14 299 1 183 358 35 45 chr5 154704840 154704991 -48380541 + MIR SINE MIR 6 156 -106 1863 148 16 3 chr5 154704991 154705294 -48380238 + AluJb SINE Alu 1 307 -5 183 358 35 45 chr5 154705294 154705343 -48380189 + MIR SINE MIR 156 204 -58 315 65 0 0 chr5 154706010 154706056 -48379476 + (A)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr5 154706529 154706558 -48378974 + AT_rich Low_complexity Low_complexity 1 29 0 2150 108 0 0 chr5 154706558 154706844 -48378688 - AluSg SINE Alu -24 286 1 2113 86 14 7 chr5 154707203 154707495 -48378037 + AluSg SINE Alu 1 294 -16 2131 92 7 7 chr5 154707505 154707800 -48377732 + AluSg SINE Alu 1 295 -15 1923 122 3 14 chr5 154707810 154708105 -48377427 + AluSx SINE Alu 1 292 -20 827 118 0 16 chr5 154708163 154708290 -48377242 + FLAM_C SINE Alu 1 125 -18 336 281 76 47 chr5 154708463 154708619 -48376913 + MIR3 SINE MIR 7 169 -39 280 240 67 0 chr5 154708977 154709052 -48376480 - MER39 LTR ERV1 -1 706 627 215 210 20 140 chr5 154709108 154709177 -48376355 + MIR SINE MIR 149 204 -58 2137 101 3 0 chr5 154709177 154709474 -48376058 + AluSp SINE Alu 1 298 -15 215 210 20 140 chr5 154709474 154709504 -48376028 + MIR SINE MIR 204 236 -26 884 245 5 19 chr5 154709588 154709796 -48375736 - MIR SINE MIR 0 262 58 183 301 159 9 chr5 154710134 154710247 -48375285 - L2 LINE L2 -319 2953 2824 2503 62 0 0 chr5 154710515 154710822 -48374710 - AluY SINE Alu -4 307 1 257 292 69 69 chr5 154711357 154711501 -48374031 - MIR3 SINE MIR -61 147 4 1701 157 7 0 chr5 154711839 154712126 -48373406 - AluJb SINE Alu -23 289 1 380 309 17 62 chr5 154712433 154712611 -48372921 - MER5B DNA MER1_type -6 172 3 252 262 29 97 chr5 154713386 154713489 -48372043 - MIR3 SINE MIR -111 97 2 1141 174 0 5 chr5 154713791 154713986 -48371546 + AluJo SINE Alu 85 278 -34 458 70 14 0 chr5 154713992 154714063 -48371469 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 349 280 112 0 chr5 154714945 154715088 -48370444 + L1ME4a LINE L1 5769 5927 -194 650 131 0 9 chr5 154716420 154716527 -48369005 + FLAM_C SINE Alu 38 143 0 2022 129 0 7 chr5 154716547 154716849 -48368683 + AluJb SINE Alu 1 300 -12 252 143 0 0 chr5 154716859 154716901 -48368631 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 390 289 123 39 chr5 154717127 154717344 -48368188 - MIR SINE MIR -17 245 8 1794 155 3 23 chr5 154718845 154719154 -48366378 - AluJb SINE Alu -9 303 1 185 105 0 53 chr5 154719775 154719813 -48365719 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 2179 99 3 0 chr5 154719817 154720120 -48365412 - AluSp SINE Alu -9 304 1 1924 108 45 0 chr5 154720278 154720565 -48364967 + AluSx SINE Alu 1 300 -12 446 185 0 0 chr5 154720700 154720765 -48364767 - AluJ/FLAM SINE Alu -246 66 2 219 88 0 0 chr5 154720959 154720993 -48364539 + (TA)n Simple_repeat Simple_repeat 2 35 0 734 156 23 8 chr5 154721012 154721140 -48364392 - FLAM_C SINE Alu -3 130 1 2450 59 0 7 chr5 154721300 154721606 -48363926 - AluY SINE Alu -7 304 1 1478 112 0 14 chr5 154721718 154721933 -48363599 + AluJo SINE Alu 85 296 -16 2104 124 0 13 chr5 154721935 154722250 -48363282 + AluSx SINE Alu 1 311 -1 1754 161 13 0 chr5 154723373 154723672 -48361860 - AluJb SINE Alu -9 303 1 5407 68 16 135 chr5 154723836 154724774 -48360758 - LTR12 LTR ERV1 0 826 1 1024 148 32 37 chr5 154724785 154724974 -48360558 - AluJ SINE Alu -2 310 123 1651 167 7 3 chr5 154725003 154725290 -48360242 - AluJb SINE Alu -24 288 1 26 0 0 0 chr5 154725292 154725318 -48360214 + AT_rich Low_complexity Low_complexity 1 26 0 751 165 0 0 chr5 154725374 154725489 -48360043 - AluJ SINE Alu -177 135 21 2353 74 7 0 chr5 154725512 154725810 -48359722 - AluSc SINE Alu -9 300 1 1408 178 15 133 chr5 154725908 154726308 -48359224 - MLT1A1 LTR MaLR -5 360 8 423 272 59 44 chr5 154726353 154726489 -48359043 - MIR3 SINE MIR -68 140 3 730 246 111 71 chr5 154726726 154726863 -48358669 + MIR SINE MIR 1 131 -131 2112 121 0 0 chr5 154726863 154727160 -48358372 + AluSq SINE Alu 1 297 -16 730 246 111 71 chr5 154727160 154727274 -48358258 + MIR SINE MIR 131 262 0 318 334 82 66 chr5 154729841 154730262 -48355270 - L1ME1 LINE L1 -165 6001 5569 2448 36 0 20 chr5 154730269 154730574 -48354958 - AluY SINE Alu -12 299 1 2047 137 0 3 chr5 154730708 154731052 -48354480 - AluSq SINE Alu 0 344 2 301 193 79 60 chr5 154731389 154731502 -48354030 + MIR SINE MIR 38 150 -63 1290 263 87 15 chr5 154731603 154732006 -48353526 - LTR16A LTR ERVL -1 449 18 1210 230 29 26 chr5 154732016 154732360 -48353172 + HAL1 LINE L1 1396 1740 -767 352 260 60 10 chr5 154732511 154732611 -48352921 + L1ME3A LINE L1 5961 6065 -105 30 59 0 0 chr5 154732714 154732765 -48352767 + AT_rich Low_complexity Low_complexity 1 51 0 227 233 0 83 chr5 154732774 154732834 -48352698 + L2 LINE L2 3251 3305 -8 207 162 0 0 chr5 154732837 154732874 -48352658 + CT-rich Low_complexity Low_complexity 1 37 0 1552 116 0 0 chr5 154732893 154733109 -48352423 - AluSq SINE Alu -97 216 1 1385 175 62 31 chr5 154733938 154734229 -48351303 - AluJb SINE Alu -12 300 1 2086 123 0 7 chr5 154734238 154734548 -48350984 - AluSx SINE Alu -4 308 1 2368 82 0 13 chr5 154734553 154734870 -48350662 - AluSp SINE Alu 0 313 1 278 174 43 0 chr5 154735038 154735084 -48350448 + Alu SINE Alu 3 50 -250 1190 89 0 0 chr5 154735084 154735241 -48350291 + AluSg/x SINE Alu 144 300 -10 1964 118 20 0 chr5 154735415 154735711 -48349821 - AluSx SINE Alu -10 302 1 489 265 54 83 chr5 154736047 154736251 -48349281 + MIR3 SINE MIR 5 202 -6 356 236 19 150 chr5 154736282 154736389 -48349143 + MIR SINE MIR 10 129 -133 2083 91 0 7 chr5 154736389 154736702 -48348830 + AluY SINE Alu 1 311 0 356 236 19 150 chr5 154736702 154736759 -48348773 + MIR SINE MIR 129 140 -122 2280 89 3 0 chr5 154736759 154737061 -48348471 + AluSp SINE Alu 2 304 -9 356 236 19 150 chr5 154737061 154737118 -48348414 + MIR SINE MIR 140 203 -59 1212 246 105 19 chr5 154737124 154737449 -48348083 + MER119 DNA MER1_type 7 359 -224 367 97 0 16 chr5 154737607 154737669 -48347863 + Alu SINE Alu 239 299 -3 806 261 97 44 chr5 154737763 154738352 -48347180 + L1ME3A LINE L1 5179 5834 -336 1836 166 3 0 chr5 154738352 154738654 -48346878 + AluJb SINE Alu 1 303 -9 806 261 97 44 chr5 154738654 154738781 -48346751 + L1ME3A LINE L1 5834 5953 -217 1372 100 0 2 chr5 154738818 154739061 -48346471 + AluSq SINE Alu 2 298 -15 2167 124 51 25 chr5 154739073 154739428 -48346104 + THE1B LTR MaLR 1 364 0 256 267 47 73 chr5 154739458 154739649 -48345883 + L1ME3A LINE L1 5962 6147 -23 2333 94 0 0 chr5 154739836 154740144 -48345388 - AluSg1 SINE Alu -1 308 1 1477 198 61 85 chr5 154740286 154740325 -48345207 + MLT1D LTR MaLR 5 43 -462 2080 109 0 3 chr5 154740325 154740618 -48344914 + AluSc SINE Alu 1 292 -17 1477 198 61 85 chr5 154740618 154741038 -48344494 + MLT1D LTR MaLR 43 453 -52 411 163 169 1 chr5 154741038 154741140 -48344392 - L1MD3 LINE L1 -2 7993 6264 212 0 36 0 chr5 154741155 154741183 -48344349 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 463 108 54 0 chr5 154741206 154741280 -48344252 - L1MC1 LINE L1 -20 6313 6236 318 143 26 117 chr5 154741280 154741357 -48344175 + MLT1D LTR MaLR 557 626 0 231 310 35 0 chr5 154741528 154741586 -48343946 - MER91A DNA MER1_type -9 187 128 2064 125 7 0 chr5 154742031 154742336 -48343196 - AluSx SINE Alu -5 307 1 2020 124 3 6 chr5 154742353 154742667 -48342865 - AluSq SINE Alu 0 313 1 1518 181 0 45 chr5 154742938 154743248 -48342284 + AluJo SINE Alu 1 296 -16 2054 109 3 0 chr5 154743251 154743569 -48341963 + AluSp SINE Alu 1 319 0 500 286 178 35 chr5 154744341 154744711 -48340821 - L1MD3 LINE L1 -2071 5737 5315 24 0 0 0 chr5 154745280 154745304 -48340228 + AT_rich Low_complexity Low_complexity 1 24 0 2177 58 20 14 chr5 154745382 154745676 -48339856 + AluY SINE Alu 1 296 -15 1791 158 0 10 chr5 154745748 154746039 -48339493 + AluJb SINE Alu 1 288 -24 2090 107 3 3 chr5 154746049 154746340 -48339192 + AluSq SINE Alu 1 291 -22 344 221 23 12 chr5 154746521 154746607 -48338925 + L1MC5 LINE L1 7827 7913 -48 736 109 70 39 chr5 154746611 154746739 -48338793 + FLAM_C SINE Alu 2 133 0 1847 148 0 14 chr5 154749206 154749503 -48336029 + AluJo SINE Alu 4 296 -16 1562 115 0 13 chr5 154749816 154750051 -48335481 - AluSq SINE Alu -13 300 69 2359 63 0 7 chr5 154750056 154750358 -48335174 - AluY SINE Alu -11 300 1 3391 153 33 31 chr5 154750380 154750494 -48335038 - MER6A DNA MER2_type -260 605 493 1725 156 28 0 chr5 154750494 154750783 -48334749 + AluJb SINE Alu 1 297 -15 3391 153 33 31 chr5 154750783 154750876 -48334656 - MER6A DNA MER2_type -372 493 402 2016 102 61 0 chr5 154750876 154751170 -48334362 + AluSx SINE Alu 1 312 0 3391 153 33 31 chr5 154751170 154751564 -48333968 - MER6A DNA MER2_type -463 402 2 2293 96 0 0 chr5 154751619 154751920 -48333612 + AluSg SINE Alu 1 301 -9 1959 101 4 0 chr5 154752156 154752423 -48333109 + AluSp SINE Alu 1 268 -45 336 0 0 0 chr5 154752554 154752589 -48332943 + U2 snRNA snRNA 1 35 -153 1205 167 35 0 chr5 154752589 154752787 -48332745 + MER84 LTR ERVI 2 206 -301 1205 116 39 60 chr5 154752777 154752890 -48332642 + MER84 LTR ERVI 281 388 -119 2316 63 0 16 chr5 154752890 154753206 -48332326 - AluY SINE Alu 0 311 1 1205 116 39 60 chr5 154753206 154753324 -48332208 + MER84 LTR ERVI 388 507 0 309 283 198 0 chr5 154753324 154753430 -48332102 - MIR SINE MIR -115 147 21 2202 79 3 3 chr5 154753627 154753932 -48331600 - AluSx SINE Alu -6 306 2 295 278 191 24 chr5 154754329 154754455 -48331077 - MIR3 SINE MIR -22 186 40 550 187 33 0 chr5 154754647 154754738 -48330794 - U6 snRNA snRNA -13 94 1 1081 75 0 0 chr5 154755177 154755310 -48330222 + AluSp SINE Alu 1 133 -180 6261 73 30 32 chr5 154755313 154756620 -48328912 + SVA Other Other 432 1381 -5 1352 78 0 6 chr5 154756628 154756807 -48328725 + AluSp SINE Alu 121 298 -15 227 362 95 0 chr5 154757080 154757196 -48328336 + L2 LINE L2 3175 3301 -12 2147 112 0 0 chr5 154757196 154757512 -48328020 + AluSq SINE Alu 1 316 0 826 152 19 11 chr5 154757521 154757703 -48327829 - L1MC/D LINE L1 -749 5431 5259 370 336 31 12 chr5 154757681 154757940 -48327592 + L1MC/D LINE L1 3581 3844 -2302 * 452 285 61 16 chr5 154758011 154758257 -48327275 + L1MC/D LINE L1 4447 4703 -1443 1890 124 23 7 chr5 154758343 154758642 -48326890 - AluSg SINE Alu -6 304 1 1933 133 0 20 chr5 154758658 154758958 -48326574 - AluSx SINE Alu -17 295 2 32 26 0 0 chr5 154759063 154759102 -48326430 + AT_rich Low_complexity Low_complexity 1 39 0 2314 95 0 0 chr5 154759116 154759420 -48326112 + AluSg SINE Alu 1 304 -6 819 145 0 0 chr5 154759421 154759538 -48325994 - AluJo/FLAM SINE Alu -193 119 3 372 307 88 68 chr5 154759554 154759873 -48325659 + L1MC/D LINE L1 4877 5205 -941 1551 197 38 0 chr5 154759873 154760162 -48325370 + AluJo SINE Alu 1 300 -12 372 307 88 68 chr5 154760162 154760207 -48325325 + L1MC/D LINE L1 5205 5248 -898 290 238 72 38 chr5 154760225 154760390 -48325142 + L1MC/D LINE L1 5283 5456 -870 1158 246 110 60 chr5 154760412 154760767 -48324765 + HAL1 LINE L1 652 1043 -1464 2175 125 0 0 chr5 154760767 154761079 -48324453 + AluSx SINE Alu 1 312 0 1158 246 110 60 chr5 154761079 154761240 -48324292 + HAL1 LINE L1 1043 1194 -1313 326 205 0 0 chr5 154761248 154761326 -48324206 + HAL1 LINE L1 1149 1226 -1281 1999 115 0 3 chr5 154761381 154761667 -48323865 + AluSx SINE Alu 1 285 -27 210 169 17 34 chr5 154761672 154761700 -48323832 + (TA)n Simple_repeat Simple_repeat 2 29 -30 810 181 0 0 chr5 154761700 154761827 -48323705 + FLAM_A SINE Alu 5 131 -2 210 169 17 34 chr5 154761827 154761857 -48323675 + (TA)n Simple_repeat Simple_repeat 29 59 0 2089 109 3 3 chr5 154761990 154762283 -48323249 - AluSg SINE Alu -17 293 1 482 276 10 0 chr5 154763833 154763931 -48321601 - MER81 DNA DNA -2 112 14 225 264 59 36 chr5 154763931 154764051 -48321481 + MIR SINE MIR 49 175 -33 191 294 39 0 chr5 154764156 154764207 -48321325 - MIR3 SINE MIR -2 206 154 220 175 0 25 chr5 154764287 154764327 -48321205 + L2 LINE L2 3179 3217 -96 1507 153 71 140 chr5 154764437 154764902 -48320630 - MER63B DNA MER1_type 0 436 4 1976 123 13 3 chr5 154765303 154765603 -48319929 + AluSx SINE Alu 1 303 -9 225 0 0 0 chr5 154765707 154765732 -48319800 + (T)n Simple_repeat Simple_repeat 1 25 0 904 94 0 0 chr5 154765732 154765849 -48319683 - AluSp SINE Alu -174 139 23 869 205 0 0 chr5 154765872 154766028 -48319504 - FRAM SINE Alu -20 156 1 365 202 17 126 chr5 154766030 154766149 -48319383 - MIR3 SINE MIR -25 183 78 2184 52 52 0 chr5 154766224 154766511 -48319021 + AluY SINE Alu 2 303 -8 675 234 133 0 chr5 154767012 154767200 -48318332 - MER5C DNA MER1_type -105 219 7 1841 144 7 3 chr5 154767559 154767857 -48317675 + AluSq SINE Alu 1 299 -14 2156 96 3 0 chr5 154767860 154768197 -48317335 + AluSc SINE Alu 1 309 0 2016 125 3 7 chr5 154768262 154768566 -48316966 + AluSx SINE Alu 1 303 -9 189 233 50 33 chr5 154768913 154768973 -48316559 - MIR SINE MIR -61 147 87 318 232 0 0 chr5 154770023 154770092 -48315440 + MIR SINE MIR 67 135 -127 2267 84 10 3 chr5 154770196 154770495 -48315037 - AluSx SINE Alu -10 302 2 1793 134 3 21 chr5 154770848 154771138 -48314394 + AluJo SINE Alu 21 305 -7 1726 167 0 0 chr5 154771469 154771757 -48313775 - AluJb SINE Alu -1 311 24 827 133 47 0 chr5 154771883 154772011 -48313521 + AluJo SINE Alu 1 134 -178 1863 143 0 34 chr5 154772015 154772336 -48313196 + AluSx SINE Alu 1 310 -2 2131 91 34 0 chr5 154772338 154772634 -48312898 + AluSx SINE Alu 1 306 -6 2139 98 19 13 chr5 154772635 154772942 -48312590 + AluSc SINE Alu 1 309 0 2471 57 0 0 chr5 154773620 154773917 -48311615 - AluY SINE Alu -14 297 1 257 292 69 69 chr5 154774452 154774596 -48310936 - MIR3 SINE MIR -61 147 4 1730 163 0 0 chr5 154774934 154775223 -48310309 - AluJb SINE Alu -23 289 1 380 309 17 62 chr5 154775530 154775708 -48309824 - MER5B DNA MER1_type -6 172 3 252 262 29 97 chr5 154776484 154776587 -48308945 - MIR3 SINE MIR -111 97 2 1141 174 0 5 chr5 154776889 154777084 -48308448 + AluJo SINE Alu 85 278 -34 425 84 14 0 chr5 154777090 154777161 -48308371 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 349 280 112 0 chr5 154778043 154778186 -48307346 + L1ME4a LINE L1 5769 5927 -194 650 131 0 9 chr5 154779516 154779623 -48305909 + FLAM_C SINE Alu 38 143 0 2030 129 0 7 chr5 154779642 154779945 -48305587 + AluJb SINE Alu 1 301 -11 252 143 0 0 chr5 154779955 154779997 -48305535 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 390 289 123 39 chr5 154780223 154780440 -48305092 - MIR SINE MIR -17 245 8 1794 155 3 23 chr5 154781941 154782250 -48303282 - AluJb SINE Alu -9 303 1 185 105 0 53 chr5 154782871 154782909 -48302623 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 2179 99 3 0 chr5 154782913 154783216 -48302316 - AluSp SINE Alu -9 304 1 1021 156 0 16 chr5 154783362 154783374 -48302158 + AluSg/x SINE Alu 121 132 -180 1995 104 42 0 chr5 154783374 154783662 -48301870 + AluSx SINE Alu 1 300 -12 1021 156 0 16 chr5 154783662 154783862 -48301670 + AluSg/x SINE Alu 132 312 0 1800 150 13 38 chr5 154783872 154784016 -48301516 + AluJo SINE Alu 1 147 -165 2188 97 0 3 chr5 154784016 154784316 -48301216 + AluSg1 SINE Alu 1 299 -10 1800 150 13 38 chr5 154784316 154784485 -48301047 + AluJo SINE Alu 147 306 -6 2127 113 3 16 chr5 154784615 154784926 -48300606 - AluSq SINE Alu -6 307 1 22 0 0 0 chr5 154785650 154785672 -48299860 + AT_rich Low_complexity Low_complexity 1 22 0 2067 97 0 10 chr5 154785672 154785962 -48299570 - AluSg SINE Alu -23 287 1 1219 198 12 27 chr5 154786027 154786285 -48299247 + AluSx SINE Alu 33 286 -26 935 294 46 82 chr5 154786314 154786490 -48299042 - L2 LINE L2 -612 2702 2521 2140 106 0 3 chr5 154786490 154786782 -48298750 + AluSg SINE Alu 1 291 -19 935 294 46 82 chr5 154786782 154786972 -48298560 - L2 LINE L2 -793 2521 2362 1958 127 7 20 chr5 154786972 154787271 -48298261 + AluSx SINE Alu 1 295 -17 935 294 46 82 chr5 154787271 154787492 -48298040 - L2 LINE L2 -952 2362 2135 192 212 81 111 chr5 154787653 154787752 -48297780 - L2 LINE L2 -20 3252 3157 1289 144 10 0 chr5 154787776 154787978 -48297554 + AluJo SINE Alu 85 288 -24 22 0 0 0 chr5 154788940 154788962 -48296570 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr5 154789468 154789497 -48296035 + AT_rich Low_complexity Low_complexity 1 29 0 2109 115 0 0 chr5 154789497 154789783 -48295749 - AluSg SINE Alu -24 286 1 2113 86 14 7 chr5 154790142 154790434 -48295098 + AluSg SINE Alu 1 294 -16 2104 95 7 7 chr5 154790444 154790739 -48294793 + AluSg SINE Alu 1 295 -15 1923 122 3 14 chr5 154790749 154791044 -48294488 + AluSx SINE Alu 1 292 -20 827 118 0 16 chr5 154791102 154791229 -48294303 + FLAM_C SINE Alu 1 125 -18 336 281 76 47 chr5 154791402 154791558 -48293974 + MIR3 SINE MIR 7 169 -39 240 243 81 0 chr5 154791916 154791990 -48293542 - MER39 LTR ERV1 -1 706 627 215 210 20 140 chr5 154792046 154792115 -48293417 + MIR SINE MIR 149 204 -58 2137 101 3 0 chr5 154792115 154792412 -48293120 + AluSp SINE Alu 1 298 -15 215 210 20 140 chr5 154792412 154792442 -48293090 + MIR SINE MIR 204 236 -26 884 245 5 19 chr5 154792526 154792734 -48292798 - MIR SINE MIR 0 262 58 1402 63 0 5 chr5 154793454 154793644 -48291888 - AluY SINE Alu -4 307 119 2491 58 0 0 chr5 154793653 154793963 -48291569 - AluY SINE Alu -1 310 1 2098 106 0 26 chr5 154793990 154794292 -48291240 + AluSx SINE Alu 1 294 -18 21 36 0 0 chr5 154794707 154794735 -48290797 + AT_rich Low_complexity Low_complexity 1 28 0 502 273 0 0 chr5 154795546 154795678 -48289854 - L1M4 LINE L1 -2708 3438 3307 1727 164 10 16 chr5 154796554 154796859 -48288673 + AluJo SINE Alu 1 303 -9 1912 159 0 0 chr5 154797700 154798009 -48287523 - AluJb SINE Alu -3 309 1 481 167 20 0 chr5 154798096 154798198 -48287334 + CT-rich Low_complexity Low_complexity 1 104 0 2239 86 0 3 chr5 154798198 154798501 -48287031 - AluSg SINE Alu -8 302 1 1565 172 0 0 chr5 154798534 154798790 -48286742 - AluJb SINE Alu -54 258 3 25 51 0 0 chr5 154798952 154798991 -48286541 + AT_rich Low_complexity Low_complexity 1 39 0 2388 43 0 13 chr5 154799209 154799512 -48286020 - AluY SINE Alu -12 299 1 460 278 60 94 chr5 154799532 154799721 -48285811 - L1ME4a LINE L1 -2 6119 5942 868 148 0 15 chr5 154799721 154799856 -48285676 + FLAM_C SINE Alu 1 133 0 460 278 60 94 chr5 154799856 154799965 -48285567 - L1ME4a LINE L1 -179 5942 5831 2449 55 3 0 chr5 154799967 154800275 -48285257 - AluY SINE Alu -2 309 1 406 138 0 15 chr5 154800275 154800340 -48285192 + MADE1 DNA Mariner 17 80 0 406 250 10 0 chr5 154800446 154800546 -48284986 - U13 snRNA snRNA -2 102 2 4673 186 32 59 chr5 154801173 154801815 -48283717 + L1M4 LINE L1 4171 4829 -1355 652 149 9 19 chr5 154801815 154801922 -48283610 + U6 snRNA snRNA 1 106 -1 4673 186 32 59 chr5 154801922 154802177 -48283355 + L1M4 LINE L1 4829 5090 -1094 1616 177 13 3 chr5 154802177 154802477 -48283055 + AluJb SINE Alu 10 312 0 4673 186 32 59 chr5 154802477 154802942 -48282590 + L1M4 LINE L1 5090 5488 -696 2256 93 0 3 chr5 154802942 154803253 -48282279 + AluSx SINE Alu 1 310 -2 2374 76 0 0 chr5 154803363 154803666 -48281866 - AluY SINE Alu -8 303 1 2281 70 7 0 chr5 154803735 154804021 -48281511 - AluSg SINE Alu -20 290 3 1832 157 10 16 chr5 154804261 154804435 -48281097 - AluSx SINE Alu -2 310 137 1927 145 26 0 chr5 154804435 154804739 -48280793 - AluSx SINE Alu 0 312 1 1832 157 10 16 chr5 154804739 154804876 -48280656 - AluSx SINE Alu -175 137 1 922 133 7 0 chr5 154804885 154805028 -48280504 - AluSp/q SINE Alu 0 313 170 1219 187 73 90 chr5 154805035 154805184 -48280348 - L1M4 LINE L1 -820 5326 5176 1372 183 35 11 chr5 154805184 154805469 -48280063 - AluJo SINE Alu -18 294 3 2396 65 3 16 chr5 154805469 154805776 -48279756 - AluY SINE Alu -8 303 1 1219 187 73 90 chr5 154805776 154806048 -48279484 - L1M4 LINE L1 -968 5178 4911 1315 105 15 5 chr5 154806051 154806251 -48279281 - MER47A DNA MER2_type 0 366 165 690 219 8 0 chr5 154806284 154806412 -48279120 + FLAM_C SINE Alu 2 130 -3 1323 153 47 17 chr5 154806434 154806670 -48278862 + AluJo SINE Alu 54 296 -16 433 202 115 10 chr5 154806672 154806776 -48278756 - MER47A DNA MER2_type -248 118 4 1233 236 58 7 chr5 154806777 154807087 -48278445 - L1M4 LINE L1 -1239 4907 4582 836 168 0 21 chr5 154807088 154807231 -48278301 - FLAM_C SINE Alu -3 140 1 679 163 42 70 chr5 154807242 154807395 -48278137 - L1M4 LINE L1 -1572 4574 4418 2585 70 0 3 chr5 154807395 154807707 -48277825 + AluSq SINE Alu 1 311 -2 679 163 42 70 chr5 154807707 154807758 -48277774 - L1M4 LINE L1 -1728 4418 4374 344 136 30 0 chr5 154807758 154807824 -48277708 - L1MA10 LINE L1 -2 6332 6265 2194 117 0 13 chr5 154807909 154808216 -48277316 - AluSx SINE Alu -9 303 1 596 77 39 0 chr5 154808270 154808348 -48277184 - U6 snRNA snRNA -26 81 1 5551 130 46 32 chr5 154808354 154809222 -48276310 - L1MA8 LINE L1 -4 6287 5394 2350 98 0 19 chr5 154809222 154809540 -48275992 - AluSq SINE Alu -1 312 1 5551 130 46 32 chr5 154809540 154809749 -48275783 - L1MA8 LINE L1 -897 5394 5190 1756 174 10 0 chr5 154809765 154810058 -48275474 - AluJo SINE Alu -16 296 1 1752 170 7 0 chr5 154810152 154810457 -48275075 - AluJo SINE Alu 0 309 3 1220 185 0 5 chr5 154810613 154810813 -48274719 + AluJo SINE Alu 81 279 -33 2137 134 10 0 chr5 154810852 154811151 -48274381 - AluSx SINE Alu -10 302 1 1871 174 7 3 chr5 154811472 154811776 -48273756 + AluJb SINE Alu 6 310 -2 1813 197 3 0 chr5 154811905 154812210 -48273322 + AluJb SINE Alu 1 306 -6 386 185 0 0 chr5 154812278 154812343 -48273189 + AluJ/FLAM SINE Alu 2 66 -236 1547 204 7 7 chr5 154813171 154813456 -48272076 + AluJo SINE Alu 1 285 -27 27 49 0 0 chr5 154813456 154813497 -48272035 + AT_rich Low_complexity Low_complexity 1 41 0 1910 116 4 0 chr5 154814915 154815182 -48270350 + AluSx SINE Alu 1 268 -44 1156 191 160 15 chr5 154815376 154815638 -48269894 + AluJo SINE Alu 2 301 -1 1005 127 0 0 chr5 154815746 154815880 -48269652 + AluSq/x SINE Alu 1 134 -178 2274 102 0 3 chr5 154815882 154816185 -48269347 + AluSx SINE Alu 1 302 -10 2061 131 0 33 chr5 154816188 154816324 -48269208 + AluSx SINE Alu 1 140 -172 2282 84 6 32 chr5 154816324 154816635 -48268897 + AluSq SINE Alu 1 303 -10 2061 131 0 33 chr5 154816635 154816803 -48268729 + AluSx SINE Alu 140 295 -17 2185 117 0 16 chr5 154816971 154817280 -48268252 - AluSx SINE Alu -8 304 1 1879 143 35 0 chr5 154817313 154817600 -48267932 + AluSx SINE Alu 1 297 -15 2364 56 3 36 chr5 154818334 154818640 -48266892 - AluY SINE Alu -15 296 1 311 95 0 0 chr5 154818739 154818781 -48266751 + 5S rRNA rRNA 1 42 -79 1496 170 33 0 chr5 154818970 154819246 -48266286 + L1MB3 LINE L1 5895 6179 -4 1634 120 4 17 chr5 154819373 154819477 -48266055 - AluSx SINE Alu -74 238 134 2401 89 3 0 chr5 154819477 154819779 -48265753 - AluSq SINE Alu -10 303 1 1634 120 4 17 chr5 154819779 154819915 -48265617 - AluSx SINE Alu -178 134 1 2299 60 43 0 chr5 154819965 154820246 -48265286 - AluY SINE Alu -16 295 3 602 281 127 42 chr5 154820382 154821239 -48264293 - L1MC4a LINE L1 -748 5398 5153 2238 86 17 3 chr5 154821266 154821556 -48263976 - AluSp SINE Alu -19 294 1 2133 118 4 0 chr5 154821928 154822230 -48263302 - AluSg SINE Alu 0 306 4 2333 92 0 20 chr5 154822336 154822640 -48262892 + AluSg SINE Alu 1 298 -12 231 342 0 0 chr5 154822798 154822915 -48262617 + L1M1 LINE L1 5735 5851 -451 629 244 120 62 chr5 154825663 154825750 -48259782 - MIR SINE MIR -24 238 157 2238 121 0 0 chr5 154825750 154826047 -48259485 - AluSq SINE Alu -16 297 1 629 244 120 62 chr5 154826047 154826184 -48259348 - MIR SINE MIR -105 157 1 373 272 59 44 chr5 154826421 154826557 -48258975 + MIR3 SINE MIR 3 140 -68 1405 175 15 133 chr5 154826602 154827002 -48258530 + MLT1A1 LTR MaLR 8 360 -5 2478 74 7 0 chr5 154827100 154827397 -48258135 + AluSc SINE Alu 1 299 -10 751 165 0 0 chr5 154827420 154827535 -48257997 + AluJ SINE Alu 21 135 -177 26 0 0 0 chr5 154827591 154827617 -48257915 + AT_rich Low_complexity Low_complexity 1 26 0 1781 164 7 3 chr5 154827619 154827906 -48257626 + AluJb SINE Alu 1 288 -24 1094 148 32 37 chr5 154827935 154828124 -48257408 + AluJ SINE Alu 123 310 -2 4980 63 64 135 chr5 154828135 154829024 -48256508 + LTR12 LTR ERV1 1 826 0 1866 161 13 0 chr5 154829188 154829486 -48256046 + AluJb SINE Alu 1 302 -10 2228 124 0 13 chr5 154830607 154830922 -48254610 - AluSx SINE Alu -1 311 1 1561 112 0 14 chr5 154830924 154831139 -48254393 - AluJo SINE Alu -16 296 85 2587 59 0 7 chr5 154831251 154831557 -48253975 + AluY SINE Alu 1 304 -7 778 160 23 8 chr5 154831717 154831848 -48253684 + FLAM_C SINE Alu 1 133 0 237 83 0 0 chr5 154831864 154831900 -48253632 + (TA)n Simple_repeat Simple_repeat 2 37 0 522 169 0 0 chr5 154832094 154832171 -48253361 + AluJ/FLAM SINE Alu 2 78 -234 1737 191 3 7 chr5 154832222 154832515 -48253017 + AluJb SINE Alu 2 293 -19 1120 64 114 140 chr5 154832624 154832860 -48252672 + MER30 DNA MER1_type 1 230 0 25 21 0 43 chr5 154832912 154832927 -48252605 + AT_rich Low_complexity Low_complexity 1 15 -30 1853 182 10 3 chr5 154832927 154833235 -48252297 - AluJb SINE Alu -2 310 1 25 21 0 43 chr5 154833235 154833266 -48252266 + AT_rich Low_complexity Low_complexity 15 45 0 1751 157 7 23 chr5 154833349 154833649 -48251883 + AluJo SINE Alu 1 295 -17 1573 157 4 27 chr5 154833723 154833985 -48251547 - AluJo SINE Alu -56 256 1 24 32 0 0 chr5 154834062 154834093 -48251439 + AT_rich Low_complexity Low_complexity 1 31 0 1765 144 49 14 chr5 154834686 154834970 -48250562 - AluJo SINE Alu -14 298 5 835 224 32 48 chr5 154835012 154835262 -48250270 - MIR SINE MIR -14 248 3 296 270 0 34 chr5 154835731 154835820 -48249712 - L2 LINE L2 -36 3277 3192 367 177 0 0 chr5 154835823 154835885 -48249647 + MER117 DNA MER1_type 18 79 -118 1819 114 20 102 chr5 154836218 154836426 -48249106 - AluYb8 SINE Alu -3 315 144 2446 71 0 3 chr5 154836426 154836721 -48248811 - AluSx SINE Alu -18 294 1 1819 114 20 102 chr5 154836721 154836855 -48248677 - AluYb8 SINE Alu -174 144 1 286 264 189 0 chr5 154836855 154836961 -48248571 - L2 LINE L2 -11 3302 3177 2362 103 6 0 chr5 154838229 154838540 -48246992 - AluSq SINE Alu 0 313 1 2268 97 3 3 chr5 154839395 154839694 -48245838 - AluSx SINE Alu -12 300 2 2241 100 0 13 chr5 154839725 154840026 -48245506 + AluSp SINE Alu 1 297 -16 1651 153 27 4 chr5 154840125 154840387 -48245145 - AluJo SINE Alu -44 268 1 1607 159 16 4 chr5 154840445 154840702 -48244830 - AluJo SINE Alu -23 289 30 2402 92 0 0 chr5 154840705 154840999 -48244533 - AluSg SINE Alu -16 294 1 387 0 0 0 chr5 154841387 154841430 -48244102 + (CA)n Simple_repeat Simple_repeat 2 44 0 290 148 0 33 chr5 154842680 154842741 -48242791 - MIR SINE MIR -46 216 158 2445 84 0 13 chr5 154842994 154843304 -48242228 - AluSp SINE Alu -7 306 1 1562 136 25 102 chr5 154843329 154843652 -48241880 - AluJo SINE Alu -14 298 1 190 182 0 0 chr5 154845139 154845172 -48240360 - L2 LINE L2 -18 3295 3263 25 0 0 0 chr5 154845200 154845225 -48240307 + AT_rich Low_complexity Low_complexity 1 25 0 1542 126 21 132 chr5 154845844 154846169 -48239363 - AluJb SINE Alu -11 291 3 1939 140 20 7 chr5 154846764 154847057 -48238475 - AluJo SINE Alu -15 297 1 622 225 33 0 chr5 154847121 154847241 -48238291 + FLAM_C SINE Alu 2 125 -18 22 0 0 0 chr5 154847241 154847263 -48238269 + AT_rich Low_complexity Low_complexity 1 22 0 216 266 0 0 chr5 154847263 154847276 -48238256 + GA-rich Low_complexity Low_complexity 2 14 -66 1443 188 49 26 chr5 154847276 154847580 -48237952 + AluJb SINE Alu 1 311 -1 216 266 0 0 chr5 154847580 154847645 -48237887 + GA-rich Low_complexity Low_complexity 13 80 0 2075 143 3 3 chr5 154850016 154850317 -48235215 + AluSx SINE Alu 1 301 -11 1884 125 3 83 chr5 154851536 154851869 -48233663 + AluSx SINE Alu 1 308 0 466 269 126 6 chr5 154852041 154852223 -48233309 - MIR SINE MIR -54 208 5 2133 105 34 0 chr5 154854262 154854557 -48230975 + AluSq SINE Alu 1 305 -8 525 276 175 0 chr5 154856235 154856452 -48229080 - MIR SINE MIR -4 258 4 260 233 50 0 chr5 154856801 154856817 -48228715 + AluJb SINE Alu 117 135 -167 2438 86 0 0 chr5 154856817 154857121 -48228411 + AluSc SINE Alu 1 304 -5 1207 158 35 106 chr5 154857138 154857449 -48228083 + AluJo SINE Alu 7 295 -17 21 0 0 0 chr5 154857634 154857655 -48227877 + AT_rich Low_complexity Low_complexity 1 21 0 2188 129 0 0 chr5 154857689 154857984 -48227548 + AluSx SINE Alu 1 295 -17 194 62 31 0 chr5 154858116 154858148 -48227384 + (CA)n Simple_repeat Simple_repeat 2 34 0 570 282 19 13 chr5 154858148 154858304 -48227228 - FRAM SINE Alu -9 157 1 1107 179 39 10 chr5 154858343 154858550 -48226982 - AluJb SINE Alu -99 213 1 1159 161 59 20 chr5 154858550 154858730 -48226802 - L1MA6 LINE L1 -328 5972 5778 243 0 0 0 chr5 154858730 154858757 -48226775 + (TG)n Simple_repeat Simple_repeat 2 28 0 1159 161 59 20 chr5 154858757 154858830 -48226702 - L1MA6 LINE L1 -522 5778 5709 358 219 24 73 chr5 154858809 154858888 -48226644 + L1MA10 LINE L1 6210 6282 -52 * 2108 119 14 3 chr5 154858888 154859181 -48226351 + AluSx SINE Alu 1 296 -16 358 219 24 73 chr5 154859181 154859224 -48226308 + L1MA10 LINE L1 6282 6326 -8 642 275 34 59 chr5 154859225 154859461 -48226071 + MLT1J LTR MaLR 210 439 -72 2418 71 17 0 chr5 154859465 154859759 -48225773 - AluY SINE Alu -12 299 1 1164 174 68 5 chr5 154860011 154860218 -48225314 + AluJo SINE Alu 1 220 -92 301 143 20 0 chr5 154860218 154860267 -48225265 + AluJo SINE Alu 86 135 -167 1545 112 9 9 chr5 154860291 154860514 -48225018 + AluJb SINE Alu 86 308 -4 2614 132 41 88 chr5 154860514 154860886 -48224646 + L1MB8 LINE L1 5600 5936 -242 1587 148 80 8 chr5 154860886 154861150 -48224382 + AluSg SINE Alu 1 283 -27 2614 132 41 88 chr5 154861150 154861383 -48224149 + L1MB8 LINE L1 5936 6178 0 1665 151 49 11 chr5 154861396 154861681 -48223851 + AluJb SINE Alu 6 301 -11 1304 131 123 45 chr5 154861689 154861957 -48223575 + AluSc SINE Alu 9 297 -12 436 156 0 0 chr5 154861966 154862043 -48223489 + AluJ/FRAM SINE Alu 231 307 -5 182 211 0 70 chr5 154864726 154864783 -48220749 - MIR SINE MIR -140 122 70 964 197 50 46 chr5 154864847 154865065 -48220467 - MER20 DNA MER1_type 0 219 1 244 254 25 107 chr5 154865141 154865238 -48220294 + L2 LINE L2 3200 3287 -26 2197 115 0 13 chr5 154865238 154865552 -48219980 - AluSx SINE Alu -2 310 1 244 254 25 107 chr5 154865552 154865576 -48219956 + L2 LINE L2 3287 3311 -2 * 481 258 23 23 chr5 154865572 154865704 -48219828 - MIR SINE MIR -95 167 36 248 353 33 33 chr5 154866496 154866646 -48218886 - MIR SINE MIR -105 157 8 184 265 20 0 chr5 154870314 154870363 -48215169 - MIR SINE MIR -123 85 36 319 223 97 19 chr5 154871142 154871245 -48214287 - MIR SINE MIR 0 262 152 534 154 206 0 chr5 154871245 154871381 -48214151 - MER104 DNA Tc2 -1 179 16 1711 163 14 17 chr5 154873838 154874133 -48211399 - AluJo SINE Alu -18 294 1 2102 135 0 0 chr5 154874762 154875058 -48210474 + AluSx SINE Alu 12 307 -5 1898 108 89 4 chr5 154875058 154875326 -48210206 + AluSx SINE Alu 1 292 -20 359 244 104 37 chr5 154875327 154875461 -48210071 + FLAM_A SINE Alu 1 133 0 935 156 0 81 chr5 154875683 154875869 -48209663 - AluSp SINE Alu -6 307 137 1714 185 10 3 chr5 154877505 154877802 -48207730 - AluJo SINE Alu -13 299 1 2245 130 0 0 chr5 154877888 154878188 -48207344 + AluSx SINE Alu 1 300 -12 2322 94 3 0 chr5 154878251 154878548 -48206984 + AluSp SINE Alu 1 298 -15 678 71 116 0 chr5 154878665 154878777 -48206755 + L1ME1 LINE L1 5748 5872 -294 1330 126 131 0 chr5 154878781 154879003 -48206529 + AluJo SINE Alu 40 290 -22 1223 174 96 4 chr5 154879003 154879273 -48206259 + L1ME1 LINE L1 5868 6162 -4 2023 92 0 15 chr5 154879280 154879551 -48205981 - AluSq SINE Alu -1 312 46 464 86 0 0 chr5 154879551 154879609 -48205923 - AluJ/FLAM SINE Alu -225 87 30 272 228 97 26 chr5 154879640 154879754 -48205778 + L1MC4 LINE L1 5813 5934 -1874 683 207 41 0 chr5 154879911 154880056 -48205476 - MIR SINE MIR -110 152 2 773 73 34 28 chr5 154880077 154880255 -48205277 + (TA)n Simple_repeat Simple_repeat 2 180 0 357 200 71 0 chr5 154880276 154880361 -48205171 + L1MC4 LINE L1 6612 6702 -1340 28 29 0 0 chr5 154880361 154880396 -48205136 + AT_rich Low_complexity Low_complexity 1 35 0 192 256 141 0 chr5 154880677 154880755 -48204777 - L2 LINE L2 -8 3264 3176 2269 85 14 10 chr5 154880835 154881129 -48204403 - AluSg SINE Alu -15 295 1 2471 62 0 0 chr5 154881129 154881419 -48204113 - AluY SINE Alu -21 290 1 581 105 15 135 chr5 154881430 154881563 -48203969 - FLAM_A SINE Alu -2 140 24 1596 65 10 0 chr5 154881665 154881864 -48203668 + AluY SINE Alu 102 302 -9 2264 122 0 0 chr5 154882032 154882335 -48203197 - AluSg SINE Alu -7 303 1 261 57 0 0 chr5 154882479 154882514 -48203018 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 777 195 6 24 chr5 154882516 154882680 -48202852 - AluJb SINE Alu -30 282 122 607 227 8 0 chr5 154883856 154883988 -48201544 + FLAM_C SINE Alu 1 133 0 204 304 108 61 chr5 154884165 154884379 -48201153 - L2 LINE L2 -809 2505 2282 2012 139 4 0 chr5 154884663 154884972 -48200560 - AluSq SINE Alu 0 310 1 2253 118 0 0 chr5 154885078 154885375 -48200157 + AluSx SINE Alu 1 297 -15 931 130 0 0 chr5 154886055 154886186 -48199346 - FLAM_C SINE Alu -1 132 2 595 249 102 91 chr5 154886329 154886614 -48198918 + MER102a DNA MER1_type 40 327 -3 198 0 0 0 chr5 154886817 154886839 -48198693 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2106 103 4 0 chr5 154886852 154887124 -48198408 - AluSq SINE Alu -40 273 1 1965 211 58 125 chr5 154887149 154887748 -48197784 + L1MC4 LINE L1 6959 7597 -445 1297 166 44 0 chr5 154887748 154887977 -48197555 + L1MC2 LINE L1 6097 6335 -9 1965 211 58 125 chr5 154887977 154888170 -48197362 + L1MC4 LINE L1 7597 7801 -241 2195 111 0 3 chr5 154888170 154888467 -48197065 + AluSx SINE Alu 1 296 -16 1965 211 58 125 chr5 154888467 154888764 -48196768 + L1MC4 LINE L1 7801 7969 -73 2287 114 0 0 chr5 154888764 154889061 -48196471 + AluSx SINE Alu 2 298 -14 1965 211 58 125 chr5 154889061 154889130 -48196402 + L1MC4 LINE L1 7969 8041 -1 2367 62 42 0 chr5 154889162 154889451 -48196081 - AluY SINE Alu -8 303 3 1502 149 0 0 chr5 154889453 154889675 -48195857 - AluJb SINE Alu -4 308 87 2269 129 18 23 chr5 154889855 154890241 -48195291 + L1MB3 LINE L1 5766 6149 -34 989 136 117 28 chr5 154890329 154890543 -48194989 + MER46A DNA MER2_type 4 236 0 33 0 0 0 chr5 154891370 154891403 -48194129 + AT_rich Low_complexity Low_complexity 1 33 0 2267 116 0 0 chr5 154891424 154891725 -48193807 - AluSx SINE Alu -11 301 1 387 303 35 21 chr5 154891860 154892002 -48193530 + MIR SINE MIR 47 190 -72 1276 181 133 4 chr5 154892226 154892496 -48193036 + AluJo SINE Alu 1 305 -7 1894 125 45 11 chr5 154892510 154892797 -48192735 - AluSx SINE Alu -15 297 1 1307 204 72 11 chr5 154893338 154893617 -48191915 - AluJb SINE Alu -16 296 1 2258 112 20 3 chr5 154893690 154893995 -48191537 + AluSx SINE Alu 1 310 -2 2117 135 3 0 chr5 154894088 154894384 -48191148 + AluSx SINE Alu 1 297 -15 2179 111 0 23 chr5 154894472 154894778 -48190754 + AluSx SINE Alu 1 299 -13 2046 137 3 3 chr5 154894789 154895095 -48190437 + AluSx SINE Alu 1 306 -6 3822 127 26 28 chr5 154895437 154895953 -48189579 + L1PA16 LINE L1 5519 6035 -131 2075 102 11 3 chr5 154895953 154896236 -48189296 + AluSq SINE Alu 29 313 0 3822 127 26 28 chr5 154896236 154896367 -48189165 + L1PA16 LINE L1 6035 6165 -1 548 211 191 16 chr5 154896636 154896830 -48188702 - MIR SINE MIR -33 229 2 2196 98 20 0 chr5 154896860 154897157 -48188375 - AluSg SINE Alu -7 303 1 229 229 169 12 chr5 154897403 154897486 -48188046 - L3 LINE CR1 -65 1512 1417 306 285 98 0 chr5 154898451 154898574 -48186958 - MIR SINE MIR -11 251 117 2459 52 10 10 chr5 154898576 154898884 -48186648 + AluSc SINE Alu 1 308 -1 1747 156 0 53 chr5 154899138 154899172 -48186360 - AluJo SINE Alu -9 303 269 2332 56 13 29 chr5 154899172 154899478 -48186054 + AluY SINE Alu 1 301 -10 1747 156 0 53 chr5 154899478 154899763 -48185769 - AluJo SINE Alu -43 269 1 1602 132 17 71 chr5 154899794 154900089 -48185443 + AluJo SINE Alu 21 299 -13 2267 74 17 0 chr5 154900148 154900444 -48185088 + AluY SINE Alu 5 305 -6 1861 145 33 0 chr5 154900448 154900724 -48184808 + AluSx SINE Alu 1 285 -27 189 0 0 0 chr5 154900726 154900747 -48184785 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 403 248 101 0 chr5 154900838 154900967 -48184565 - L1ME4a LINE L1 -207 5914 5773 2104 124 17 0 chr5 154900967 154901265 -48184267 + AluSx SINE Alu 1 303 -9 1018 180 29 15 chr5 154901320 154901526 -48184006 - AluJo SINE Alu -103 209 1 897 188 51 6 chr5 154901526 154901702 -48183830 - L1MB7 LINE L1 -44 6140 5957 419 206 30 92 chr5 154901917 154901973 -48183559 + L1MC/D LINE L1 5691 5749 -2036 2313 93 3 7 chr5 154901973 154902273 -48183259 - AluSq SINE Alu -14 299 1 419 206 30 92 chr5 154902273 154902347 -48183185 + L1MC/D LINE L1 5749 5813 -1972 1339 122 30 10 chr5 154902358 154902555 -48182977 - AluSp SINE Alu -20 293 93 2483 66 3 3 chr5 154902621 154902926 -48182606 + AluY SINE Alu 1 305 -6 2334 99 0 3 chr5 154903108 154903402 -48182130 + AluSc SINE Alu 1 293 -16 3910 96 0 4 chr5 154903594 154904107 -48181425 - MER9 LTR ERVK 0 511 1 564 420 201 3 chr5 154904133 154904237 -48181295 + MIR SINE MIR 5 87 -175 532 67 0 111 chr5 154904237 154904276 -48181256 + MADE1 DNA Mariner 1 26 -54 2367 88 7 0 chr5 154904276 154904571 -48180961 - AluSq SINE Alu -16 297 1 532 67 0 111 chr5 154904571 154904621 -48180911 + MADE1 DNA Mariner 26 80 0 564 420 201 3 chr5 154904621 154904770 -48180762 + MIR SINE MIR 87 262 0 219 295 51 0 chr5 154904811 154904889 -48180643 - MIR SINE MIR -77 185 104 335 95 0 0 chr5 154905045 154905087 -48180445 - 5S rRNA rRNA -79 42 1 2147 133 0 7 chr5 154905120 154905421 -48180111 + AluJb SINE Alu 4 302 -10 2592 33 7 3 chr5 154905483 154905787 -48179745 - AluY SINE Alu -6 305 1 311 282 12 0 chr5 154905944 154906029 -48179503 + MIR3 SINE MIR 104 189 -19 2254 102 3 3 chr5 154906084 154906377 -48179155 + AluSg SINE Alu 1 293 -17 983 142 0 0 chr5 154906430 154906571 -48178961 + AluJb SINE Alu 1 141 -171 44 35 0 0 chr5 154906588 154906646 -48178886 + AT_rich Low_complexity Low_complexity 1 58 0 1532 198 0 4 chr5 154906710 154906978 -48178554 + AluJb SINE Alu 36 302 -10 2380 101 0 0 chr5 154906980 154907286 -48178246 + AluSc SINE Alu 1 306 -3 356 260 111 22 chr5 154907757 154907938 -48177594 - L2 LINE L2 0 3313 3117 891 236 163 42 chr5 154907978 154908402 -48177130 + MLT1H LTR MaLR 16 490 -59 256 291 60 34 chr5 154908462 154908579 -48176953 - L2 LINE L2 -253 3060 2941 2348 85 3 3 chr5 154909619 154909914 -48175618 + AluSp SINE Alu 1 295 -18 366 203 0 0 chr5 154909933 154909997 -48175535 - AluJ/monomer SINE Alu -5 297 234 3692 171 29 72 chr5 154910097 154910434 -48175098 + L1M4 LINE L1 4489 4839 -1345 655 149 9 19 chr5 154910434 154910541 -48174991 + U6 snRNA snRNA 1 106 -1 3692 171 29 72 chr5 154910541 154910796 -48174736 + L1M4 LINE L1 4839 5104 -1080 1722 177 13 3 chr5 154910796 154911096 -48174436 + AluJb SINE Alu 10 312 0 3692 171 29 72 chr5 154911096 154911562 -48173970 + L1M4 LINE L1 5104 5488 -696 2133 128 0 3 chr5 154911562 154911875 -48173657 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 154911882 154911904 -48173628 + AT_rich Low_complexity Low_complexity 1 22 0 344 136 30 0 chr5 154911926 154911992 -48173540 - L1MA10 LINE L1 -2 6332 6265 2201 117 0 13 chr5 154912077 154912385 -48173147 - AluSx SINE Alu -8 304 1 596 77 39 0 chr5 154912439 154912517 -48173015 - U6 snRNA snRNA -26 81 1 5555 129 46 32 chr5 154912523 154913391 -48172141 - L1MA8 LINE L1 -4 6287 5394 2342 98 0 19 chr5 154913391 154913708 -48171824 - AluSq SINE Alu -2 311 1 5555 129 46 32 chr5 154913708 154913917 -48171615 - L1MA8 LINE L1 -897 5394 5190 1785 171 10 0 chr5 154913933 154914226 -48171306 - AluJo SINE Alu -16 296 1 1773 166 7 0 chr5 154914320 154914625 -48170907 - AluJo SINE Alu 0 309 3 1224 175 5 10 chr5 154914781 154914981 -48170551 + AluJo SINE Alu 81 279 -33 1873 163 10 7 chr5 154915020 154915321 -48170211 - AluSx SINE Alu -10 302 1 1867 176 7 3 chr5 154915642 154915948 -48169584 + AluJb SINE Alu 6 312 0 1756 196 3 7 chr5 154916073 154916379 -48169153 + AluJb SINE Alu 1 305 -7 386 185 0 0 chr5 154916448 154916513 -48169019 + AluJ/FLAM SINE Alu 2 66 -236 1547 204 7 7 chr5 154917341 154917626 -48167906 + AluJo SINE Alu 1 285 -27 2353 88 3 13 chr5 155017882 155018188 -48067344 + AluSg SINE Alu 1 303 -7 867 152 66 99 chr5 155018301 155018512 -48067020 - AluJo SINE Alu -101 211 8 1104 163 25 20 chr5 155018577 155018780 -48066752 - AluJo SINE Alu -9 303 100 872 101 0 8 chr5 155018822 155018941 -48066591 + AluSq/x SINE Alu 18 135 -177 1768 175 10 3 chr5 155018941 155019249 -48066283 + AluJb SINE Alu 1 310 -2 227 261 45 23 chr5 155019312 155019400 -48066132 - MIR3 SINE MIR -11 197 108 1007 113 0 0 chr5 155019822 155019955 -48065577 + AluSq/x SINE Alu 1 133 -180 22 0 0 0 chr5 155019955 155019977 -48065555 + AT_rich Low_complexity Low_complexity 1 22 0 2288 99 0 0 chr5 155019985 155020287 -48065245 + AluY SINE Alu 1 302 -9 317 244 13 13 chr5 155020634 155020712 -48064820 + MIR SINE MIR 70 147 -61 486 247 322 7 chr5 155020797 155020976 -48064556 + L2 LINE L2 2301 2422 -892 1971 128 7 3 chr5 155020976 155021272 -48064260 - AluJo SINE Alu -15 297 1 486 247 322 7 chr5 155021272 155021549 -48063983 + L2 LINE L2 2422 2901 -413 369 248 40 10 chr5 155021707 155021808 -48063724 + L2 LINE L2 3188 3291 -22 23 33 0 0 chr5 155022728 155022758 -48062774 + GC_rich Low_complexity Low_complexity 1 30 0 371 232 226 12 chr5 155025879 155026043 -48059489 - MIR SINE MIR -13 249 51 1458 113 0 0 chr5 155027401 155027586 -48057946 + AluSx SINE Alu 1 185 -127 26 0 0 0 chr5 155027598 155027624 -48057908 + AT_rich Low_complexity Low_complexity 1 26 0 2333 68 25 0 chr5 155027626 155027929 -48057603 + AluY SINE Alu 1 310 0 1128 104 80 0 chr5 155029605 155029768 -48055764 - AluSg/x SINE Alu -3 309 134 2402 76 7 3 chr5 155029768 155030069 -48055463 - AluSx SINE Alu -10 302 1 603 77 0 0 chr5 155030090 155030168 -48055364 + AluSg/x SINE Alu 213 290 -20 2004 122 56 0 chr5 155030257 155030545 -48054987 + AluSx SINE Alu 1 304 -8 390 305 45 19 chr5 155030594 155030748 -48054784 - MIR SINE MIR -80 182 25 2331 100 0 0 chr5 155031801 155032101 -48053431 - AluSc SINE Alu -9 300 1 2270 96 14 0 chr5 155032273 155032565 -48052967 + AluSg SINE Alu 1 296 -14 284 298 219 6 chr5 155033022 155033200 -48052332 - MIR SINE MIR -12 250 35 180 0 0 0 chr5 155033427 155033447 -48052085 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2351 75 3 3 chr5 155033449 155033742 -48051790 - AluY SINE Alu -18 293 1 305 29 0 0 chr5 155034109 155034143 -48051389 - MSTD LTR MaLR -12 384 351 880 130 8 0 chr5 155034345 155034476 -48051056 - MSTD LTR MaLR -264 132 1 189 206 0 0 chr5 155034596 155034630 -48050902 + MER5B DNA MER1_type 1 34 -144 1962 126 32 3 chr5 155034642 155034927 -48050605 + AluSx SINE Alu 1 293 -19 2056 139 3 0 chr5 155034929 155035224 -48050308 + AluSx SINE Alu 1 296 -16 1415 201 40 7 chr5 155035466 155035744 -48049788 + AluJo SINE Alu 4 290 -22 183 42 0 0 chr5 155036320 155036344 -48049188 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1928 124 65 3 chr5 155036351 155036642 -48048890 - AluSx SINE Alu -3 309 1 2261 105 3 0 chr5 155037435 155037740 -48047792 + AluSp SINE Alu 1 306 -7 1988 124 0 41 chr5 155038370 155038507 -48047025 + AluSg SINE Alu 1 121 -189 2253 110 0 0 chr5 155038507 155038798 -48046734 + AluY SINE Alu 1 291 -20 1988 124 0 41 chr5 155038798 155038950 -48046582 + AluSg SINE Alu 121 278 -32 2369 99 3 0 chr5 155039541 155039843 -48045689 - AluSx SINE Alu -9 303 1 2359 95 0 0 chr5 155040051 155040345 -48045187 + AluSg SINE Alu 1 294 -16 227 149 0 21 chr5 155040578 155040625 -48044907 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 2378 111 0 0 chr5 155040631 155040938 -48044594 + AluSc SINE Alu 1 307 -2 987 204 52 16 chr5 155040938 155041129 -48044403 - AluJb SINE Alu -16 296 99 1290 188 103 7 chr5 155041130 155041301 -48044231 - AluJb SINE Alu -3 309 156 2098 115 0 45 chr5 155041301 155041613 -48043919 - AluSx SINE Alu -14 298 1 1290 188 103 7 chr5 155041613 155041723 -48043809 - AluJb SINE Alu -156 156 1 874 144 81 89 chr5 155041726 155041962 -48043570 - L1MB7 LINE L1 -51 6133 5900 1206 94 13 0 chr5 155041964 155042123 -48043409 - AluSc SINE Alu -17 292 132 2314 85 0 3 chr5 155042123 155042417 -48043115 - AluSc SINE Alu -12 297 5 1362 209 51 63 chr5 155042421 155042469 -48043063 - L1MB7 LINE L1 -267 5911 5864 2141 117 0 0 chr5 155042469 155042783 -48042749 - AluY SINE Alu 0 314 1 1362 209 51 63 chr5 155042783 155043145 -48042387 - L1MB7 LINE L1 -314 5864 5505 611 211 42 11 chr5 155043148 155043338 -48042194 - L1MB7 LINE L1 -789 5357 5162 195 179 51 0 chr5 155043590 155043629 -48041903 - MER5B DNA MER1_type -132 46 6 2275 93 0 10 chr5 155043678 155043979 -48041553 + AluSq SINE Alu 1 298 -15 3243 170 58 23 chr5 155044016 155044668 -48040864 - L1MB2 LINE L1 -1 6170 5496 1708 172 14 10 chr5 155044668 155044965 -48040567 - AluJo SINE Alu -7 305 8 1256 238 34 18 chr5 155045149 155045536 -48039996 - L1MB7 LINE L1 -2740 3406 3014 668 128 24 8 chr5 155045536 155045661 -48039871 + L1P4 LINE L1 5364 5490 -676 2170 114 0 3 chr5 155045827 155046126 -48039406 - AluSg SINE Alu -12 298 1 1873 154 0 7 chr5 155046995 155047281 -48038251 + AluSx SINE Alu 1 284 -28 2040 122 16 29 chr5 155047281 155047592 -48037940 - AluSx SINE Alu -5 307 1 1876 152 67 95 chr5 155047964 155048108 -48037424 - L1MB8 LINE L1 -120 6058 5911 2208 125 0 6 chr5 155048108 155048420 -48037112 - AluSg SINE Alu 0 310 1 1876 152 67 95 chr5 155048420 155048801 -48036731 - L1MB8 LINE L1 -267 5911 5548 1674 146 0 16 chr5 155048864 155049117 -48036415 - AluSx SINE Alu -26 286 38 180 0 0 0 chr5 155049117 155049137 -48036395 + (TG)n Simple_repeat Simple_repeat 2 21 0 1076 106 43 0 chr5 155049137 155049298 -48036234 - L1MA2 LINE L1 -1 6303 6136 2115 138 16 0 chr5 155050057 155050361 -48035171 - AluSx SINE Alu -3 309 1 395 134 15 30 chr5 155050481 155050548 -48034984 + AluJ/FLAM SINE Alu 1 66 -236 952 173 13 0 chr5 155050784 155050940 -48034592 + FRAM SINE Alu 5 162 -14 1458 170 71 25 chr5 155050954 155051237 -48034295 - AluJb SINE Alu -16 296 1 1399 173 38 8 chr5 155051238 155051504 -48034028 - L1MB3 LINE L1 -124 6059 5786 2004 91 94 0 chr5 155052005 155052280 -48033252 + AluSg SINE Alu 1 301 -9 342 0 0 0 chr5 155053249 155053287 -48032245 + (TA)n Simple_repeat Simple_repeat 2 39 0 1937 153 7 7 chr5 155053287 155053594 -48031938 - AluJb SINE Alu -5 307 1 21 0 0 0 chr5 155053845 155053866 -48031666 + AT_rich Low_complexity Low_complexity 1 21 0 393 75 0 0 chr5 155054076 155054129 -48031403 + (TG)n Simple_repeat Simple_repeat 1 53 0 2153 131 3 3 chr5 155055122 155055434 -48030098 - AluJb SINE Alu 0 312 1 1652 187 24 7 chr5 155055434 155055593 -48029939 - AluJo SINE Alu -13 299 131 2506 76 3 0 chr5 155055593 155055896 -48029636 - AluSq SINE Alu -8 305 2 1652 187 24 7 chr5 155055896 155056030 -48029502 - AluJo SINE Alu -181 131 1 204 111 0 0 chr5 155056032 155056068 -48029464 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 275 289 201 13 chr5 155059698 155059857 -48025675 - MIR SINE MIR -46 216 28 196 244 11 100 chr5 155060887 155060941 -48024591 + MIR3 SINE MIR 11 55 -153 1941 113 17 0 chr5 155060941 155061233 -48024299 + AluSx SINE Alu 2 298 -14 196 244 11 100 chr5 155061233 155061268 -48024264 + MIR3 SINE MIR 55 92 -116 205 284 147 69 chr5 155061332 155061448 -48024084 + MIR SINE MIR 22 146 -62 248 237 0 34 chr5 155061913 155061972 -48023560 - MIR SINE MIR -182 80 24 1771 130 0 74 chr5 155062240 155062466 -48023066 - AluJb SINE Alu -13 299 103 2167 90 0 20 chr5 155062466 155062766 -48022766 - AluY SINE Alu -17 294 1 1771 130 0 74 chr5 155062766 155062862 -48022670 - AluJb SINE Alu -209 103 1 411 294 55 18 chr5 155062866 155063029 -48022503 - MIR3 SINE MIR -17 191 23 331 337 142 0 chr5 155063888 155064057 -48021475 - L2 LINE L2 0 3272 3080 2365 77 0 3 chr5 155064200 155064582 -48020950 - AluSc SINE Alu 0 381 1 284 138 0 0 chr5 155064625 155064686 -48020846 - L1MB7 LINE L1 -1 6177 6117 713 114 19 0 chr5 155064751 155064856 -48020676 + AluSg/x SINE Alu 199 305 -7 817 209 70 100 chr5 155064858 155064989 -48020543 - L1ME1 LINE L1 -79 6087 5954 2119 123 0 0 chr5 155064989 155065299 -48020233 - AluSx SINE Alu -2 310 1 817 209 70 100 chr5 155065299 155065434 -48020098 - L1ME1 LINE L1 -212 5954 5828 1694 135 36 36 chr5 155065434 155065738 -48019794 - AluJo SINE Alu -8 304 1 817 209 70 100 chr5 155065738 155065771 -48019761 - L1ME1 LINE L1 -338 5828 5796 3554 194 74 32 chr5 155065781 155065973 -48019559 + MER21B LTR ERV1 12 195 -668 2233 102 3 13 chr5 155065973 155066288 -48019244 + AluSx SINE Alu 1 312 0 3554 194 74 32 chr5 155066288 155066864 -48018668 + MER21B LTR ERV1 195 812 -51 841 167 25 6 chr5 155066877 155067039 -48018493 - L1ME1 LINE L1 -358 5806 5642 1528 194 159 36 chr5 155067039 155067311 -48018221 - L1ME1 LINE L1 -780 5366 5129 1637 190 0 0 chr5 155067311 155067590 -48017942 + AluJo SINE Alu 3 281 -31 1528 194 159 36 chr5 155067590 155067689 -48017843 - L1ME1 LINE L1 -1017 5129 5044 1832 161 23 0 chr5 155067689 155067994 -48017538 + AluJb SINE Alu 1 312 0 1528 194 159 36 chr5 155067994 155068117 -48017415 - L1ME1 LINE L1 -1102 5044 4810 642 208 0 0 chr5 155068276 155068396 -48017136 - AluJb SINE Alu -8 304 185 1923 102 0 4 chr5 155168401 155168656 -47916876 + AluSx SINE Alu 59 312 0 1246 234 26 5 chr5 155168669 155169081 -47916451 + MER57A LTR ERV1 10 403 0 3610 172 99 21 chr5 155169309 155169936 -47915596 + L1MB3 LINE L1 4980 5557 -626 2269 119 0 3 chr5 155169936 155170247 -47915285 + AluSg SINE Alu 1 310 0 3610 172 99 21 chr5 155170247 155170449 -47915083 + L1MB3 LINE L1 5557 5742 -441 1653 186 0 18 chr5 155170449 155170586 -47914946 + AluJo SINE Alu 1 132 -180 1905 138 0 7 chr5 155170586 155170855 -47914677 + AluSx SINE Alu 44 310 -2 1653 186 0 18 chr5 155170855 155170997 -47914535 + AluJo SINE Alu 132 275 -37 3610 172 99 21 chr5 155170997 155171288 -47914244 + L1MB3 LINE L1 5742 6183 0 2525 72 3 3 chr5 155171381 155171688 -47913844 + AluSc SINE Alu 1 307 -2 2460 84 0 0 chr5 155171897 155172206 -47913326 - AluY SINE Alu -2 309 1 2074 109 0 55 chr5 155172211 155172375 -47913157 - AluSx SINE Alu -18 294 153 2779 42 0 0 chr5 155172375 155172686 -47912846 - AluY SINE Alu 0 311 1 2074 109 0 55 chr5 155172686 155172832 -47912700 - AluSx SINE Alu -159 153 1 1699 122 98 44 chr5 155172846 155173142 -47912390 - AluSx SINE Alu 0 312 1 251 170 0 0 chr5 155173224 155173271 -47912261 - AluJo/FRAM SINE Alu -66 236 190 1102 186 16 71 chr5 155173271 155173523 -47912009 - AluJo SINE Alu -74 238 1 2317 108 3 0 chr5 155173592 155173889 -47911643 + AluSg SINE Alu 3 300 -10 2013 134 3 3 chr5 155173900 155174211 -47911321 + AluSx SINE Alu 1 311 0 481 182 0 0 chr5 155174295 155174372 -47911160 + BC200 scRNA scRNA 65 141 -59 2175 120 7 0 chr5 155174390 155174691 -47910841 + AluSq SINE Alu 2 304 -9 2040 147 7 3 chr5 155174700 155175000 -47910532 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr5 155175412 155175435 -47910097 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2280 87 17 0 chr5 155176264 155176552 -47908980 - AluY SINE Alu -18 293 1 2412 79 7 0 chr5 155176583 155176886 -47908646 + AluSp SINE Alu 1 305 -8 2369 92 0 0 chr5 155176886 155177180 -47908352 + AluSc SINE Alu 1 294 -15 1983 101 0 66 chr5 155177245 155177563 -47907969 + AluSx SINE Alu 1 297 -15 460 273 80 53 chr5 155177599 155177775 -47907757 - MIR SINE MIR -68 194 11 2359 109 0 0 chr5 155177775 155178078 -47907454 - AluSx SINE Alu -9 303 1 2311 89 0 0 chr5 155178822 155179114 -47906418 - AluSc SINE Alu -17 292 1 2355 111 0 0 chr5 155179635 155179942 -47905590 - AluSx SINE Alu -5 307 1 21 0 0 0 chr5 155180103 155180124 -47905408 + AT_rich Low_complexity Low_complexity 1 21 0 224 255 31 71 chr5 155180359 155180409 -47905123 - MIR SINE MIR -64 198 152 2029 154 0 3 chr5 155180409 155180720 -47904812 - AluJb SINE Alu -2 310 1 224 255 31 71 chr5 155180720 155180767 -47904765 - MIR SINE MIR -110 152 105 1880 112 62 0 chr5 155182495 155182753 -47902779 + AluSx SINE Alu 1 274 -38 481 215 158 38 chr5 155182878 155183036 -47902496 - MER5A DNA MER1_type -2 187 11 247 331 215 8 chr5 155183103 155183233 -47902299 - MER5A DNA MER1_type -26 163 7 2249 105 7 0 chr5 155183850 155184144 -47901388 - AluSx SINE Alu -16 296 1 657 122 148 9 chr5 155184161 155184276 -47901256 + FLAM_A SINE Alu 3 133 0 2152 102 39 0 chr5 155184279 155184562 -47900970 - AluSq SINE Alu -19 294 1 233 29 29 0 chr5 155185681 155185715 -47899817 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 39 22 0 0 chr5 155185772 155185818 -47899714 + AT_rich Low_complexity Low_complexity 1 46 0 211 242 267 12 chr5 155185823 155185984 -47899548 + MIR SINE MIR 6 207 -55 233 219 0 0 chr5 155185990 155186031 -47899501 + AluJo SINE Alu 1 41 -262 2361 95 3 3 chr5 155186031 155186337 -47899195 - AluSx SINE Alu -1 311 6 1601 161 11 15 chr5 155186337 155186610 -47898922 + AluJo SINE Alu 27 298 -14 277 251 76 20 chr5 155190076 155190192 -47895340 - MIR SINE MIR -63 145 40 461 268 87 16 chr5 155190859 155191042 -47894490 + MER117 DNA MER1_type 2 197 0 882 229 100 69 chr5 155191994 155192186 -47893346 - L1MC4a LINE L1 -1643 6165 5981 646 93 31 0 chr5 155192186 155192283 -47893249 - L1PA8 LINE L1 -1 6171 6072 882 229 100 69 chr5 155192283 155192354 -47893178 - L1MC4a LINE L1 -1827 5981 5914 2427 88 3 0 chr5 155192354 155192651 -47892881 + AluSp SINE Alu 1 298 -15 2374 113 0 0 chr5 155192653 155192962 -47892570 + AluSg SINE Alu 2 310 0 882 229 100 69 chr5 155192962 155193136 -47892396 - L1MC4a LINE L1 -1894 5914 5702 2387 96 0 10 chr5 155193136 155193448 -47892084 + AluSg SINE Alu 1 309 -1 882 229 100 69 chr5 155193448 155193543 -47891989 - L1MC4a LINE L1 -2106 5702 5611 214 325 149 9 chr5 155193701 155193815 -47891717 - L2 LINE L2 -18 3295 3166 511 275 121 33 chr5 155194463 155194703 -47890829 + MIR SINE MIR 2 262 0 447 180 11 11 chr5 155195647 155195736 -47889796 - MER81 DNA DNA 0 114 26 297 225 0 79 chr5 155196132 155196221 -47889311 - L2 LINE L2 -54 3259 3178 2431 65 3 0 chr5 155196253 155196543 -47888989 + AluY SINE Alu 2 292 -19 457 261 54 0 chr5 155200854 155200965 -47884567 + L2 LINE L2 3193 3309 -4 208 293 6 24 chr5 155202649 155202813 -47882719 + (CGG)n Simple_repeat Simple_repeat 2 162 0 940 287 87 27 chr5 155205858 155206443 -47879089 - L1MC4a LINE L1 -1870 5938 5319 2406 72 0 13 chr5 155206547 155206854 -47878678 - AluSc SINE Alu -6 303 1 1575 149 127 0 chr5 155206928 155207196 -47878336 - AluJo SINE Alu -10 302 1 1894 164 14 3 chr5 155207277 155207570 -47877962 - AluJb SINE Alu -16 296 1 1678 101 142 0 chr5 155207615 155207896 -47877636 - AluSx SINE Alu 0 317 2 2024 94 60 0 chr5 155207902 155208191 -47877341 - AluSq SINE Alu 0 306 2 2294 93 10 13 chr5 155208205 155208517 -47877015 - AluSx SINE Alu -1 311 1 901 155 27 0 chr5 155208517 155208655 -47876877 - AluJo/FRAM SINE Alu -16 296 152 246 95 0 0 chr5 155208672 155208714 -47876818 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3104 34 0 0 chr5 155208714 155209072 -47876460 - L1PA3 LINE L1 -10 6145 5788 2107 135 0 0 chr5 155209072 155209369 -47876163 - AluSx SINE Alu -11 301 5 828 173 0 0 chr5 155209385 155209518 -47876014 - FLAM_C SINE Alu 0 133 1 288 0 0 0 chr5 155210434 155210466 -47875066 + (TG)n Simple_repeat Simple_repeat 1 32 0 2228 95 6 61 chr5 155210477 155210803 -47874729 - AluSx SINE Alu -4 308 1 377 214 84 109 chr5 155211810 155211948 -47873584 + LTR48 LTR ERV1 1 141 -503 1965 90 16 4 chr5 155211948 155212203 -47873329 + AluSx SINE Alu 1 258 -54 377 214 84 109 chr5 155212203 155212389 -47873143 + LTR48 LTR ERV1 141 357 -287 243 0 0 0 chr5 155212462 155212489 -47873043 + (CA)n Simple_repeat Simple_repeat 2 28 0 70 43 0 9 chr5 155212575 155212643 -47872889 + AT_rich Low_complexity Low_complexity 1 69 -46 1231 33 26 0 chr5 155212643 155212794 -47872738 - L1PA5 LINE L1 -3 6151 5997 70 43 0 9 chr5 155212794 155212841 -47872691 + AT_rich Low_complexity Low_complexity 69 115 0 341 216 99 77 chr5 155212845 155213024 -47872508 + LTR48B LTR ERV1 404 631 -13 2300 91 0 0 chr5 155213449 155213746 -47871786 - AluY SINE Alu -14 297 1 2019 139 0 19 chr5 155213809 155214119 -47871413 - AluSx SINE Alu -8 304 1 486 248 57 7 chr5 155214587 155214728 -47870804 - MIR SINE MIR -66 196 49 2152 124 10 0 chr5 155215151 155215458 -47870074 - AluSq SINE Alu -3 310 1 183 305 74 0 chr5 155215483 155215578 -47869954 + L2 LINE L2 2599 2700 -614 28 29 0 0 chr5 155215582 155215617 -47869915 + AT_rich Low_complexity Low_complexity 1 35 0 2173 114 10 0 chr5 155215619 155215916 -47869616 + AluSx SINE Alu 3 302 -10 1976 146 13 10 chr5 155216223 155216532 -47869000 - AluJo SINE Alu -2 310 1 28 29 0 0 chr5 155217361 155217396 -47868136 + AT_rich Low_complexity Low_complexity 1 35 0 2445 81 0 0 chr5 155217637 155217932 -47867600 + AluSg SINE Alu 5 299 -11 1852 154 0 35 chr5 155218122 155218440 -47867092 - AluJo SINE Alu -1 311 5 270 320 77 21 chr5 155219717 155219911 -47865621 - MIR SINE MIR -50 212 8 2221 117 7 0 chr5 155220707 155221007 -47864525 - AluSq SINE Alu -11 302 1 1964 149 17 0 chr5 155221078 155221373 -47864159 + AluJo SINE Alu 1 300 -12 788 179 0 0 chr5 155221584 155221701 -47863831 + FLAM_C SINE Alu 2 118 -15 38 0 0 0 chr5 155221704 155221742 -47863790 + AT_rich Low_complexity Low_complexity 1 38 0 1730 150 40 0 chr5 155221742 155222015 -47863517 + AluJb SINE Alu 1 284 -28 295 352 48 8 chr5 155222164 155222289 -47863243 + L2 LINE L2 3139 3268 -4 2014 147 3 6 chr5 155222957 155223269 -47862263 + AluJb SINE Alu 1 311 -1 1701 133 9 67 chr5 155223370 155223685 -47861847 - AluJb SINE Alu -15 297 1 22 56 0 0 chr5 155223798 155223834 -47861698 + AT_rich Low_complexity Low_complexity 1 36 0 1946 112 4 4 chr5 155223882 155224150 -47861382 - AluSx SINE Alu 0 312 45 2124 103 17 3 chr5 155224156 155224457 -47861075 - AluY SINE Alu -6 305 1 2248 75 0 3 chr5 155225255 155225578 -47859954 - AluY SINE Alu 0 322 1 2223 115 0 7 chr5 155225580 155225876 -47859656 - AluSq SINE Alu -18 295 2 1691 171 41 3 chr5 155225885 155226178 -47859354 - AluSx SINE Alu -8 304 1 2472 75 3 3 chr5 155226323 155226630 -47858902 + AluY SINE Alu 1 307 -4 402 195 115 0 chr5 155227149 155227236 -47858296 + MER103 DNA DNA 2 98 -68 911 167 12 36 chr5 155227318 155227486 -47858046 - FRAM SINE Alu -12 164 1 35 0 0 0 chr5 155227865 155227900 -47857632 + AT_rich Low_complexity Low_complexity 1 35 0 284 75 30 30 chr5 155228672 155228739 -47856793 + (TA)n Simple_repeat Simple_repeat 1 67 0 279 358 9 9 chr5 155229693 155229802 -47855730 + MIR SINE MIR 41 149 -113 1681 161 4 0 chr5 155229933 155230187 -47855345 - AluJb SINE Alu -57 255 1 207 94 47 47 chr5 155230197 155230261 -47855271 + (TA)n Simple_repeat Simple_repeat 1 64 0 501 274 128 17 chr5 155230261 155230619 -47854913 - L1ME4a LINE L1 -158 5963 5566 713 123 105 0 chr5 155230649 155230763 -47854769 - FLAM_C SINE Alu -7 126 1 2317 106 7 3 chr5 155230771 155231074 -47854458 - AluSq SINE Alu -9 304 1 351 213 116 92 chr5 155231208 155231372 -47854160 - L2 LINE L2 -1 3312 3145 2187 113 3 16 chr5 155232065 155232376 -47853156 + AluSx SINE Alu 1 307 -5 620 119 174 0 chr5 155232573 155232682 -47852850 - FLAM_C SINE Alu -5 128 1 2316 103 0 13 chr5 155233027 155233338 -47852194 - AluSg SINE Alu -1 309 3 1986 100 4 4 chr5 155233609 155233870 -47851662 + AluSq SINE Alu 43 303 -10 2320 60 40 17 chr5 155233874 155234173 -47851359 + AluY SINE Alu 1 306 -5 2218 115 0 19 chr5 155234217 155234355 -47851177 + AluSx SINE Alu 1 140 -172 2276 120 0 7 chr5 155234355 155234664 -47850868 + AluSq SINE Alu 1 307 -6 2218 115 0 19 chr5 155234664 155234839 -47850693 + AluSx SINE Alu 140 308 -4 2083 109 3 3 chr5 155234912 155235221 -47850311 - AluSq SINE Alu 0 309 1 1606 96 5 5 chr5 155235221 155235430 -47850102 - AluSc SINE Alu -100 209 1 2503 76 0 0 chr5 155237699 155238003 -47847529 + AluY SINE Alu 1 304 -7 1261 132 0 6 chr5 155238232 155238248 -47847284 + AluSg/x SINE Alu 118 133 -177 2540 57 0 35 chr5 155238248 155238565 -47846967 + AluY SINE Alu 1 306 -5 1261 132 0 6 chr5 155238565 155238730 -47846802 + AluSg/x SINE Alu 133 298 -12 757 198 12 6 chr5 155239341 155239503 -47846029 - L1MB5 LINE L1 0 6174 6012 23 0 0 0 chr5 155239610 155239633 -47845899 + AT_rich Low_complexity Low_complexity 1 23 0 194 0 39 0 chr5 155239658 155239684 -47845848 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 297 0 0 0 chr5 155239683 155239716 -47845816 + (TG)n Simple_repeat Simple_repeat 2 34 0 2259 95 0 3 chr5 155239767 155240061 -47845471 - AluSc SINE Alu -16 293 1 213 351 132 21 chr5 155242272 155242597 -47842935 - L3b LINE CR1 -8 1575 1215 3116 232 117 124 chr5 155243868 155244024 -47841508 - L2 LINE L2 -4 3309 3153 1602 168 52 4 chr5 155244024 155244292 -47841240 + AluJb SINE Alu 18 298 -14 3116 232 117 124 chr5 155244292 155245387 -47840145 - L2 LINE L2 -160 3153 2051 745 187 0 0 chr5 155245387 155245510 -47840022 + FLAM_C SINE Alu 5 127 -16 3116 232 117 124 chr5 155245510 155245526 -47840006 - L2 LINE L2 -1262 2051 2036 2185 116 0 3 chr5 155245526 155245819 -47839713 - AluSx SINE Alu -19 293 2 3116 232 117 124 chr5 155245819 155246010 -47839522 - L2 LINE L2 -1277 2036 1845 2464 52 17 0 chr5 155246010 155246297 -47839235 - AluY SINE Alu -19 292 1 3116 232 117 124 chr5 155246297 155246806 -47838726 - L2 LINE L2 -1468 1845 1334 1672 188 0 41 chr5 155246806 155246951 -47838581 + AluJo SINE Alu 1 150 -162 2307 90 0 16 chr5 155246951 155247261 -47838271 + AluY SINE Alu 1 305 -6 1672 188 0 41 chr5 155247261 155247429 -47838103 + AluJo SINE Alu 150 301 -11 3116 232 117 124 chr5 155247429 155247456 -47838076 - L2 LINE L2 -1979 1334 1308 2038 108 0 77 chr5 155247456 155247779 -47837753 + AluSx SINE Alu 1 298 -14 3116 232 117 124 chr5 155247779 155247848 -47837684 - L2 LINE L2 -2005 1308 1138 2452 79 0 0 chr5 155248786 155249091 -47836441 - AluY SINE Alu -6 305 1 2308 87 0 0 chr5 155249161 155249448 -47836084 + AluSg SINE Alu 1 287 -23 803 184 49 12 chr5 155250131 155250294 -47835238 - AluJb SINE Alu -5 307 139 856 167 81 32 chr5 155250299 155250369 -47835163 - L1MB7 LINE L1 0 6184 6119 1674 175 14 14 chr5 155250369 155250655 -47834877 + AluJo SINE Alu 1 286 -26 856 167 81 32 chr5 155250655 155250805 -47834727 - L1MB7 LINE L1 -65 6119 5953 403 169 6 3 chr5 155250833 155250898 -47834634 - L1MB8 LINE L1 -201 5977 5909 2517 74 0 0 chr5 155250898 155251195 -47834337 + AluSg SINE Alu 1 297 -13 403 169 6 3 chr5 155251195 155251220 -47834312 - L1MB8 LINE L1 -269 5909 5886 261 175 18 18 chr5 155251230 155251287 -47834245 - L1MEc LINE L1 -5678 718 662 2806 165 24 36 chr5 155251288 155251825 -47833707 - L1MB8 LINE L1 -278 5900 5369 1751 195 16 0 chr5 155251825 155252132 -47833400 - AluJo SINE Alu 0 312 1 2806 165 24 36 chr5 155252132 155252176 -47833356 - L1MB8 LINE L1 -809 5369 5326 527 296 45 6 chr5 155252331 155252510 -47833022 + MIR SINE MIR 75 260 -2 918 289 21 3 chr5 155252515 155252802 -47832730 + L1ME1 LINE L1 39 330 -6066 1174 262 60 57 chr5 155252979 155253302 -47832230 + L1ME1 LINE L1 613 934 -5462 2334 105 0 3 chr5 155253302 155253615 -47831917 + AluSq SINE Alu 1 312 -1 821 158 0 15 chr5 155253621 155253754 -47831778 + FLAM_C SINE Alu 2 132 -1 1174 262 60 57 chr5 155253754 155254209 -47831323 + L1ME1 LINE L1 938 1400 -4996 2269 109 3 3 chr5 155254254 155254558 -47830974 + AluSp SINE Alu 1 304 -9 1983 123 6 52 chr5 155254626 155254951 -47830581 - AluSx SINE Alu -2 310 1 2239 105 3 0 chr5 155254957 155255251 -47830281 - AluSg SINE Alu -15 295 1 959 201 6 0 chr5 155255264 155255433 -47830099 + AluJb SINE Alu 130 299 -13 1839 206 67 14 chr5 155255455 155255974 -47829558 + L1ME1 LINE L1 1651 2197 -4199 1783 175 10 3 chr5 155255975 155256267 -47829265 + AluJo SINE Alu 1 294 -18 2171 105 31 10 chr5 155256272 155256566 -47828966 + AluSq SINE Alu 1 300 -13 418 236 21 86 chr5 155256640 155256688 -47828844 + L1ME1 LINE L1 3324 3374 -2841 654 208 8 15 chr5 155256688 155256818 -47828714 + FLAM_A SINE Alu 5 133 0 418 236 21 86 chr5 155256818 155256892 -47828640 + L1ME1 LINE L1 3374 3451 -2764 2279 116 0 0 chr5 155256892 155257194 -47828338 - AluSx SINE Alu -10 302 1 418 236 21 86 chr5 155257194 155257303 -47828229 + L1ME1 LINE L1 3451 3541 -2674 1074 124 5 60 chr5 155257309 155257494 -47828038 + LTR9 LTR ERV1 438 612 0 1508 103 0 0 chr5 155257587 155257791 -47827741 + HUERS-P3 LTR ERV1 8715 8918 -1 2734 142 93 43 chr5 155257791 155258297 -47827235 + LTR9 LTR ERV1 1 531 -81 1229 233 48 41 chr5 155258313 155258730 -47826802 + L1ME1 LINE L1 3544 3963 -2252 831 196 20 30 chr5 155258768 155258967 -47826565 + MER106A DNA MER1_type 38 234 -2 2634 185 80 134 chr5 155258983 155259333 -47826199 + L1ME1 LINE L1 4096 4463 -1752 376 153 0 0 chr5 155259333 155259392 -47826140 + AluSg/x SINE Alu 174 232 -68 2634 185 80 134 chr5 155259392 155259544 -47825988 + L1ME1 LINE L1 4463 4622 -1593 846 167 0 0 chr5 155259544 155259670 -47825862 + FLAM_C SINE Alu 1 126 -7 2634 185 80 134 chr5 155259670 155259710 -47825822 + L1ME1 LINE L1 4622 4663 -1552 2368 89 10 13 chr5 155259710 155260024 -47825508 + AluSp SINE Alu 1 313 0 2634 185 80 134 chr5 155260024 155260422 -47825110 + L1ME1 LINE L1 4663 5081 -1134 8220 56 7 4 chr5 155260422 155261426 -47824106 - LTR13 LTR ERVK 0 1007 1 2634 185 80 134 chr5 155261426 155261599 -47823933 + L1ME1 LINE L1 5081 5262 -953 2094 136 0 37 chr5 155261599 155261923 -47823609 - AluSx SINE Alu 0 312 1 2634 185 80 134 chr5 155261923 155261967 -47823565 + L1ME1 LINE L1 5262 5248 -967 2453 75 3 0 chr5 155261967 155262260 -47823272 + AluSq SINE Alu 1 294 -19 2634 185 80 134 chr5 155262260 155262282 -47823250 + L1ME1 LINE L1 5247 5269 -946 1795 182 7 10 chr5 155262286 155262588 -47822944 + AluJb SINE Alu 3 303 -9 456 210 0 40 chr5 155262591 155262691 -47822841 + FLAM_A SINE Alu 1 96 -46 604 188 54 0 chr5 155262733 155262845 -47822687 - FLAM_C SINE Alu -20 123 6 2964 202 47 50 chr5 155262862 155263017 -47822515 + L1ME1 LINE L1 5394 5548 -687 2123 131 7 0 chr5 155263017 155263314 -47822218 + AluY SINE Alu 1 299 -12 2964 202 47 50 chr5 155263314 155263536 -47821996 + L1ME1 LINE L1 5548 5769 -466 1831 142 61 10 chr5 155263536 155263832 -47821700 - AluJb SINE Alu -1 311 1 2964 202 47 50 chr5 155263832 155264079 -47821453 + L1ME1 LINE L1 5769 6018 -217 2473 74 0 0 chr5 155264079 155264378 -47821154 - AluY SINE Alu -12 299 1 2964 202 47 50 chr5 155264378 155264586 -47820946 + L1ME1 LINE L1 6018 6225 -10 1786 173 7 13 chr5 155264586 155264892 -47820640 + AluJb SINE Alu 1 304 -8 246 62 0 0 chr5 155265290 155265322 -47820210 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1641 154 4 43 chr5 155265378 155265657 -47819875 - AluJo SINE Alu -38 274 7 735 163 0 22 chr5 155265857 155265992 -47819540 + FLAM_C SINE Alu 1 132 -1 2335 112 3 10 chr5 155266221 155266535 -47818997 + AluSx SINE Alu 1 312 0 2046 137 3 3 chr5 155266749 155267034 -47818498 - AluSx SINE Alu -27 285 1 563 322 25 25 chr5 155267123 155267362 -47818170 + MIR SINE MIR 4 242 -20 2166 142 0 0 chr5 155267983 155268293 -47817239 - AluSx SINE Alu -2 310 1 347 299 60 0 chr5 155268482 155268616 -47816916 - MIR SINE MIR 0 262 121 285 256 12 0 chr5 155268657 155268739 -47816793 + L2 LINE L2 3231 3313 0 2356 83 10 3 chr5 155269287 155269587 -47815945 + AluY SINE Alu 1 302 -9 333 139 7 4 chr5 155269587 155269645 -47815887 - L1MC4 LINE L1 -1339 6983 2006 360 0 0 0 chr5 155269645 155269685 -47815847 + (CA)n Simple_repeat Simple_repeat 1 40 0 323 321 53 23 chr5 155269724 155269792 -47815740 + MER5B DNA MER1_type 41 105 -73 2363 89 0 29 chr5 155269792 155270105 -47815427 - AluSp SINE Alu -9 304 1 323 321 53 23 chr5 155270105 155270167 -47815365 + MER5B DNA MER1_type 105 175 -3 488 238 119 7 chr5 155270176 155270319 -47815213 + MER5A DNA MER1_type 1 167 -19 325 325 80 12 chr5 155270184 155270347 -47815185 - MER5A DNA MER1_type -15 174 1 * 1547 248 57 111 chr5 155271190 155272239 -47813293 + L2 LINE L2 2307 3313 0 2097 137 3 10 chr5 155272272 155272579 -47812953 + AluSx SINE Alu 1 305 -7 2205 94 7 24 chr5 155272867 155273164 -47812368 - AluSx SINE Alu -20 292 1 253 262 41 16 chr5 155273357 155273460 -47812072 + MIR SINE MIR 79 150 -58 1834 138 44 11 chr5 155274423 155274724 -47810808 + AluSx SINE Alu 1 310 0 21 36 0 0 chr5 155275610 155275638 -47809894 + AT_rich Low_complexity Low_complexity 1 28 0 1854 157 14 0 chr5 155275643 155275943 -47809589 + AluSx SINE Alu 1 304 0 2506 73 0 3 chr5 155276210 155276513 -47809019 + AluY SINE Alu 1 302 -9 2071 93 100 0 chr5 155276526 155276806 -47808726 + AluSx SINE Alu 1 308 -4 2342 80 3 40 chr5 155278103 155278427 -47807105 - AluSx SINE Alu 0 312 1 321 298 43 43 chr5 155278759 155278864 -47806668 - L1ME4a LINE L1 -15 6106 5999 704 180 8 0 chr5 155278864 155278992 -47806540 - FLAM_A SINE Alu 0 133 5 321 298 43 43 chr5 155278992 155279027 -47806505 - L1ME4a LINE L1 -121 6000 5966 1780 116 0 0 chr5 155279043 155279268 -47806264 - AluSx SINE Alu -87 225 1 255 217 116 0 chr5 155280123 155280192 -47805340 - HUERS-P1 LTR ERV1 -3349 2914 2838 2384 67 3 3 chr5 155280534 155280819 -47804713 + AluSp SINE Alu 11 295 -18 294 236 0 11 chr5 155280929 155281018 -47804514 - L1ME4a LINE L1 -104 6017 5930 973 111 0 65 chr5 155281021 155281174 -47804358 - FLAM_C SINE Alu 0 143 1 1310 107 6 6 chr5 155281672 155281849 -47803683 + AluSg/x SINE Alu 124 300 -10 684 149 41 0 chr5 155281852 155281973 -47803559 - FLAM_C SINE Alu -9 134 9 1900 109 0 8 chr5 155282346 155282603 -47802929 + AluSc SINE Alu 43 297 -12 2157 71 0 0 chr5 155282708 155282960 -47802572 - AluY SINE Alu -59 252 1 2219 110 0 10 chr5 155283021 155283322 -47802210 - AluSg SINE Alu -5 305 8 2026 141 7 7 chr5 155283326 155283625 -47801907 - AluSx SINE Alu -13 299 1 2201 113 0 3 chr5 155283663 155283956 -47801576 - AluSx SINE Alu -20 292 1 694 175 0 8 chr5 155284038 155284158 -47801374 + FRAM SINE Alu 13 131 -45 2467 77 0 0 chr5 155284184 155284481 -47801051 + AluSg SINE Alu 1 297 -13 642 229 55 80 chr5 155284481 155284756 -47800776 + L2 LINE L2 3043 3310 -3 503 172 48 62 chr5 155285188 155285333 -47800199 + MIR SINE MIR 118 260 -2 22 0 0 0 chr5 155286819 155286841 -47798691 + AT_rich Low_complexity Low_complexity 1 22 0 1587 134 52 59 chr5 155288057 155288347 -47797185 + AluJo SINE Alu 7 294 -18 538 316 36 0 chr5 155288508 155288701 -47796831 + MIR SINE MIR 41 240 -22 38 22 0 0 chr5 155288864 155288909 -47796623 + GC_rich Low_complexity Low_complexity 1 45 0 255 175 0 0 chr5 155289003 155289060 -47796472 + (CTG)n Simple_repeat Simple_repeat 2 58 0 36 23 0 0 chr5 155289082 155289125 -47796407 + GC_rich Low_complexity Low_complexity 1 43 0 2290 95 7 13 chr5 155291560 155291864 -47793668 + AluSx SINE Alu 2 303 -9 347 165 233 21 chr5 155291922 155292018 -47793514 + MIR SINE MIR 34 148 -63 2311 79 0 40 chr5 155292347 155292490 -47793042 + AluSc SINE Alu 1 127 -182 2325 89 0 20 chr5 155292490 155292793 -47792739 + AluY SINE Alu 1 297 -14 2311 79 0 40 chr5 155292793 155292953 -47792579 + AluSc SINE Alu 127 292 -17 814 150 8 0 chr5 155292964 155293091 -47792441 + AluJo/FLAM SINE Alu 1 128 -174 2393 95 3 3 chr5 155293093 155293397 -47792135 + AluSq SINE Alu 1 304 -9 1912 138 31 7 chr5 155293460 155293751 -47791781 - AluJb SINE Alu -14 298 1 2477 92 0 0 chr5 155297083 155297387 -47788145 + AluSc SINE Alu 1 304 -5 705 154 8 0 chr5 155297399 155297516 -47788016 + AluJb SINE Alu 1 118 -194 2174 87 0 0 chr5 155297541 155297806 -47787726 - AluSx SINE Alu -47 265 1 30 0 0 0 chr5 155297813 155297843 -47787689 + AT_rich Low_complexity Low_complexity 1 30 0 2099 114 20 17 chr5 155300377 155300547 -47784985 - AluSx SINE Alu -12 300 127 2654 61 0 0 chr5 155300547 155300858 -47784674 - AluY SINE Alu 0 311 1 2099 114 20 17 chr5 155300858 155300986 -47784546 - AluSx SINE Alu -185 127 1 1157 127 6 12 chr5 155301276 155301449 -47784083 + AluSg/x SINE Alu 141 312 0 2332 110 3 0 chr5 155302243 155302544 -47782988 - AluSx SINE Alu -10 302 1 1063 172 0 32 chr5 155302551 155302737 -47782795 - AluJb SINE Alu -13 299 120 2500 76 3 25 chr5 155303168 155303485 -47782047 + AluSg SINE Alu 1 310 0 1002 113 0 40 chr5 155304648 155304799 -47780733 - AluJb SINE Alu -167 145 1 526 284 72 72 chr5 155304806 155305140 -47780392 + L2 LINE L2 2932 3265 -7 2592 139 36 18 chr5 155305832 155306140 -47779392 + L1MB4 LINE L1 5674 5996 -184 2127 136 0 0 chr5 155306140 155306434 -47779098 + AluSx SINE Alu 1 294 -18 2592 139 36 18 chr5 155306434 155306621 -47778911 + L1MB4 LINE L1 5996 6178 -2 2218 115 3 0 chr5 155306647 155306942 -47778590 + AluSx SINE Alu 1 296 -16 358 248 182 33 chr5 155307678 155307799 -47777733 + L2 LINE L2 3134 3272 0 671 280 60 0 chr5 155307936 155308136 -47777396 + MIR SINE MIR 28 239 -23 322 292 221 46 chr5 155310328 155310677 -47774855 + L2 LINE L2 2904 3313 0 1307 243 126 82 chr5 155311151 155311691 -47773841 - MLT1K LTR MaLR -18 570 7 306 300 89 0 chr5 155311900 155311990 -47773542 - MER5B DNA MER1_type -80 98 1 440 259 4 156 chr5 155312181 155312305 -47773227 - MIR SINE MIR 0 262 121 2417 71 0 3 chr5 155312305 155312601 -47772931 - AluY SINE Alu -16 295 1 440 259 4 156 chr5 155312601 155312669 -47772863 - MIR SINE MIR -141 121 44 2201 127 0 6 chr5 155312669 155312983 -47772549 + AluSx SINE Alu 1 312 0 1714 138 18 68 chr5 155312991 155313317 -47772215 + AluJb SINE Alu 1 310 -2 440 259 4 156 chr5 155313317 155313384 -47772148 - MIR SINE MIR -152 110 34 181 93 0 47 chr5 155315530 155315573 -47769959 + (CCG)n Simple_repeat Simple_repeat 3 43 0 384 191 0 0 chr5 155315953 155316037 -47769495 + (CAG)n Simple_repeat Simple_repeat 3 86 0 248 364 0 0 chr5 155317775 155317926 -47767606 + C-rich Low_complexity Low_complexity 27 177 0 1183 177 47 5 chr5 155319493 155319685 -47765847 - AluJb SINE Alu -28 284 85 219 280 194 0 chr5 155320422 155320515 -47765017 - L2 LINE L2 -181 3091 2981 204 307 69 40 chr5 155321288 155321389 -47764143 - MER5A DNA MER1_type -57 132 29 1319 184 43 56 chr5 155321406 155321570 -47763962 - AluJo SINE Alu -11 301 141 2320 90 7 10 chr5 155321570 155321871 -47763661 - AluSx SINE Alu -12 300 1 1319 184 43 56 chr5 155321871 155322011 -47763521 - AluJo SINE Alu -171 141 1 30 45 0 0 chr5 155322156 155322200 -47763332 + AT_rich Low_complexity Low_complexity 1 44 0 1748 171 11 0 chr5 155323148 155323434 -47762098 + AluJo SINE Alu 1 289 -23 2364 114 0 0 chr5 155323463 155323770 -47761762 + AluSq SINE Alu 1 307 -6 2358 103 0 3 chr5 155324441 155324753 -47760779 + AluY SINE Alu 1 311 0 2425 91 7 0 chr5 155324874 155325183 -47760349 - AluSp SINE Alu 0 313 3 902 216 43 40 chr5 155325273 155325551 -47759981 - L1ME1 LINE L1 -234 5932 5654 2449 72 10 0 chr5 155325729 155326035 -47759497 - AluSg SINE Alu -1 309 1 1916 112 101 0 chr5 155326075 155326351 -47759181 - AluSx SINE Alu -8 304 1 2652 199 71 14 chr5 155326906 155327553 -47757979 + L1MB7 LINE L1 5480 6163 -21 2239 124 0 0 chr5 155327560 155327858 -47757674 - AluSx SINE Alu -14 298 1 2331 113 0 0 chr5 155327885 155328195 -47757337 + AluSx SINE Alu 2 311 -1 2665 52 3 0 chr5 155328931 155329241 -47756291 + AluY SINE Alu 1 311 0 209 259 56 0 chr5 155329317 155329371 -47756161 + MIR SINE MIR 97 153 -109 2037 147 7 0 chr5 155329405 155329711 -47755821 + AluJb SINE Alu 1 308 -4 677 85 0 0 chr5 155329927 155330021 -47755511 + AluSc SINE Alu 202 295 -14 578 248 73 13 chr5 155330061 155330295 -47755237 + L1ME4a LINE L1 5698 5945 -176 2232 72 54 0 chr5 155330341 155330618 -47754914 - AluY SINE Alu -19 292 1 2284 104 13 0 chr5 155330633 155330940 -47754592 - AluSp SINE Alu 0 313 3 2157 108 30 3 chr5 155330987 155331283 -47754249 - AluSx SINE Alu -6 306 3 1932 154 7 3 chr5 155331477 155331775 -47753757 + AluJo SINE Alu 3 301 -11 2220 118 0 16 chr5 155331778 155332093 -47753439 + AluSx SINE Alu 2 311 -1 222 280 170 16 chr5 155332850 155333032 -47752500 - L2 LINE L2 -337 2977 2768 2301 103 3 3 chr5 155333261 155333562 -47751970 - AluSg SINE Alu -9 301 1 767 220 26 70 chr5 155333627 155334155 -47751377 - L1MC5 LINE L1 -35 7926 7303 2650 153 13 38 chr5 155334263 155334309 -47751223 - L1MB7 LINE L1 -21 6163 6117 2618 61 0 0 chr5 155334309 155334620 -47750912 + AluY SINE Alu 1 311 0 2650 153 13 38 chr5 155334620 155335103 -47750429 - L1MB7 LINE L1 -67 6117 5647 1118 115 7 0 chr5 155335148 155335296 -47750236 + FAM SINE Alu 18 166 -19 292 216 0 99 chr5 155335382 155335434 -47750098 - L1MC5 LINE L1 -742 7219 7182 2167 141 3 0 chr5 155335434 155335746 -47749786 - AluSq SINE Alu 0 313 1 292 216 0 99 chr5 155335746 155335804 -47749728 - L1MC5 LINE L1 -779 7182 7120 2494 81 0 0 chr5 155335919 155336226 -47749306 + AluY SINE Alu 1 307 -4 2441 88 3 3 chr5 155336286 155336594 -47748938 + AluSp SINE Alu 1 308 -5 29 28 0 0 chr5 155337064 155337100 -47748432 + AT_rich Low_complexity Low_complexity 1 36 0 2256 125 3 0 chr5 155337376 155337687 -47747845 - AluSx SINE Alu 0 312 1 604 90 0 0 chr5 155337776 155337854 -47747678 - AluSg/x SINE Alu -20 290 213 402 21 0 0 chr5 155338612 155338659 -47746873 + (CA)n Simple_repeat Simple_repeat 2 48 0 41 0 0 0 chr5 155339910 155339951 -47745581 + AT_rich Low_complexity Low_complexity 1 41 0 1504 181 7 40 chr5 155340235 155340534 -47744998 - AluJo SINE Alu -23 289 1 1159 220 66 62 chr5 155340620 155341106 -47744426 - L1MC5 LINE L1 -723 7238 6751 182 306 16 32 chr5 155341199 155341261 -47744271 + L2 LINE L2 3245 3305 -8 264 30 0 0 chr5 155341463 155341496 -47744036 + (CA)n Simple_repeat Simple_repeat 1 33 0 2371 88 3 13 chr5 155341890 155342196 -47743336 + AluSg SINE Alu 1 303 -7 829 153 77 101 chr5 155342309 155342518 -47743014 - AluJo SINE Alu -101 211 8 1129 163 25 20 chr5 155342583 155342786 -47742746 - AluJo SINE Alu -9 303 100 887 101 0 8 chr5 155342828 155342947 -47742585 + AluSq/x SINE Alu 18 135 -177 1810 175 10 3 chr5 155342947 155343255 -47742277 + AluJb SINE Alu 1 310 -2 243 304 39 20 chr5 155343318 155343420 -47742112 - MIR3 SINE MIR -11 197 94 1016 113 0 0 chr5 155343828 155343961 -47741571 + AluSq/x SINE Alu 1 133 -179 22 0 0 0 chr5 155343961 155343983 -47741549 + AT_rich Low_complexity Low_complexity 1 22 0 2309 99 0 0 chr5 155343991 155344293 -47741239 + AluY SINE Alu 1 302 -9 350 244 13 13 chr5 155344640 155344718 -47740814 + MIR SINE MIR 70 147 -61 669 254 292 11 chr5 155344803 155344982 -47740550 + L2 LINE L2 2301 2429 -843 1999 128 7 3 chr5 155344982 155345278 -47740254 - AluJo SINE Alu -15 297 1 669 254 292 11 chr5 155345278 155345615 -47739917 + L2 LINE L2 2429 3024 -248 419 248 40 10 chr5 155345713 155345814 -47739718 + L2 LINE L2 3188 3291 -22 23 33 0 0 chr5 155346734 155346764 -47738768 + GC_rich Low_complexity Low_complexity 1 30 0 1413 130 0 0 chr5 155347263 155347455 -47738077 + AluSg/x SINE Alu 107 298 -14 2652 199 71 14 chr5 155347462 155348109 -47737423 - L1MB7 LINE L1 -21 6163 5480 1916 112 101 0 chr5 155348664 155348940 -47736592 + AluSx SINE Alu 1 304 -8 2449 72 10 0 chr5 155348980 155349286 -47736246 + AluSg SINE Alu 1 309 -1 902 216 43 40 chr5 155349464 155349742 -47735790 + L1ME1 LINE L1 5654 5932 -234 2425 91 7 0 chr5 155349832 155350141 -47735391 + AluSp SINE Alu 3 313 0 2358 103 0 3 chr5 155350262 155350574 -47734958 - AluY SINE Alu 0 311 1 2364 114 0 0 chr5 155351245 155351552 -47733980 - AluSq SINE Alu -6 307 1 1724 173 11 0 chr5 155351581 155351865 -47733667 - AluJo SINE Alu -23 289 3 2157 108 30 3 chr5 155352059 155352355 -47733177 + AluSx SINE Alu 3 306 -6 2307 101 13 0 chr5 155352402 155352709 -47732823 + AluSp SINE Alu 3 313 0 2232 72 54 0 chr5 155352724 155353001 -47732531 + AluY SINE Alu 1 292 -19 578 248 73 13 chr5 155353047 155353281 -47732251 - L1ME4a LINE L1 -176 5945 5698 677 85 0 0 chr5 155353321 155353415 -47732117 - AluSc SINE Alu -14 295 202 2037 147 7 0 chr5 155353631 155353937 -47731595 - AluJb SINE Alu -4 308 1 209 259 56 0 chr5 155353971 155354025 -47731507 - MIR SINE MIR -109 153 97 2665 52 3 0 chr5 155354101 155354411 -47731121 - AluY SINE Alu 0 311 1 2455 87 0 0 chr5 155355147 155355458 -47730074 - AluSx SINE Alu -1 311 1 615 77 0 0 chr5 155355479 155355557 -47729975 + AluSg/x SINE Alu 215 292 -20 2023 122 56 0 chr5 155355646 155355934 -47729598 + AluSx SINE Alu 1 304 -8 446 311 43 19 chr5 155355983 155356144 -47729388 - MIR SINE MIR -80 182 18 2352 100 0 0 chr5 155357190 155357490 -47728042 - AluSc SINE Alu -9 300 1 2286 96 14 0 chr5 155357662 155357954 -47727578 + AluSg SINE Alu 1 296 -14 369 306 213 6 chr5 155358406 155358589 -47726943 - MIR SINE MIR -7 255 35 180 0 0 0 chr5 155358816 155358836 -47726696 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2360 75 3 3 chr5 155358838 155359131 -47726401 - AluY SINE Alu -18 293 1 289 29 0 0 chr5 155359498 155359532 -47726000 - MSTD LTR MaLR -12 384 351 836 152 7 0 chr5 155359727 155359865 -47725667 - MSTD LTR MaLR -257 139 1 203 206 0 0 chr5 155359985 155360019 -47725513 + MER5B DNA MER1_type 1 34 -144 1977 126 32 3 chr5 155360031 155360316 -47725216 + AluSx SINE Alu 1 293 -19 2080 139 3 0 chr5 155360318 155360613 -47724919 + AluSx SINE Alu 1 296 -16 1455 201 40 7 chr5 155360855 155361133 -47724399 + AluJo SINE Alu 4 290 -22 183 42 0 0 chr5 155361709 155361733 -47723799 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1960 124 65 3 chr5 155361740 155362031 -47723501 - AluSx SINE Alu -3 309 1 2139 105 3 0 chr5 155362824 155363129 -47722403 + AluSp SINE Alu 1 306 -7 1883 125 0 31 chr5 155363759 155363896 -47721636 + AluSg SINE Alu 1 126 -184 2126 112 0 0 chr5 155363896 155364190 -47721342 + AluY SINE Alu 1 294 -17 1883 125 0 31 chr5 155364190 155364339 -47721193 + AluSg SINE Alu 126 278 -32 2237 99 3 0 chr5 155364930 155365232 -47720300 - AluSx SINE Alu -9 303 1 2230 95 0 0 chr5 155365440 155365734 -47719798 + AluSg SINE Alu 1 294 -16 227 149 0 21 chr5 155365967 155366014 -47719518 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 2366 85 0 0 chr5 155366020 155366327 -47719205 + AluSc SINE Alu 1 307 -2 953 208 52 0 chr5 155366327 155366519 -47719013 - AluJb SINE Alu -15 297 96 1287 183 106 7 chr5 155366526 155366688 -47718844 - AluJo SINE Alu -2 300 155 1973 115 0 45 chr5 155366688 155367000 -47718532 - AluSx SINE Alu -14 298 1 1287 183 106 7 chr5 155367000 155367110 -47718422 - AluJo SINE Alu -147 155 1 868 144 81 89 chr5 155367113 155367349 -47718183 - L1MB7 LINE L1 -51 6133 5900 1139 94 13 0 chr5 155367351 155367510 -47718022 - AluSc SINE Alu -17 292 132 2190 85 0 3 chr5 155367510 155367804 -47717728 - AluSc SINE Alu -12 297 5 1341 209 51 63 chr5 155367808 155367856 -47717676 - L1MB7 LINE L1 -267 5911 5864 2016 117 0 0 chr5 155367856 155368170 -47717362 - AluY SINE Alu 0 314 1 1341 209 51 63 chr5 155368170 155368532 -47717000 - L1MB7 LINE L1 -314 5864 5505 598 211 42 11 chr5 155368535 155368725 -47716807 - L1MB7 LINE L1 -789 5357 5162 213 179 51 0 chr5 155368977 155369016 -47716516 - MER5B DNA MER1_type -132 46 6 2149 93 0 10 chr5 155369065 155369366 -47716166 + AluSq SINE Alu 1 298 -15 3224 172 58 23 chr5 155369403 155370055 -47715477 - L1MB2 LINE L1 -1 6170 5496 1600 172 14 10 chr5 155370055 155370352 -47715180 - AluJo SINE Alu -7 305 8 1242 238 34 18 chr5 155370536 155370923 -47714609 - L1MB7 LINE L1 -2740 3406 3014 661 128 24 8 chr5 155370923 155371048 -47714484 + L1P4 LINE L1 5364 5490 -676 2048 114 0 3 chr5 155371214 155371513 -47714019 - AluSg SINE Alu -12 298 1 184 337 112 0 chr5 155371808 155371897 -47713635 - L2 LINE L2 -2 3270 3172 1762 154 0 7 chr5 155372382 155372668 -47712864 + AluSx SINE Alu 1 284 -28 1915 120 17 20 chr5 155372668 155372967 -47712565 - AluSx SINE Alu -6 306 9 1854 152 67 95 chr5 155373350 155373494 -47712038 - L1MB8 LINE L1 -120 6058 5911 2079 125 0 6 chr5 155373494 155373806 -47711726 - AluSg SINE Alu 0 310 1 1854 152 67 95 chr5 155373806 155374187 -47711345 - L1MB8 LINE L1 -267 5911 5548 1571 146 0 16 chr5 155374250 155374503 -47711029 - AluSx SINE Alu -26 286 38 180 0 0 0 chr5 155374503 155374523 -47711009 + (TG)n Simple_repeat Simple_repeat 2 21 0 1069 106 43 0 chr5 155374523 155374684 -47710848 - L1MA2 LINE L1 -1 6303 6136 1995 138 16 0 chr5 155375443 155375747 -47709785 - AluSx SINE Alu -3 309 1 400 134 15 30 chr5 155375867 155375934 -47709598 + AluJ/FLAM SINE Alu 1 66 -236 893 173 13 0 chr5 155376170 155376326 -47709206 + FRAM SINE Alu 5 162 -14 1350 170 71 25 chr5 155376340 155376623 -47708909 - AluJb SINE Alu -16 296 1 1386 173 38 8 chr5 155376624 155376890 -47708642 - L1MB3 LINE L1 -124 6059 5786 1890 91 94 0 chr5 155377391 155377666 -47707866 + AluSg SINE Alu 1 301 -9 306 0 0 0 chr5 155378637 155378671 -47706861 + (TA)n Simple_repeat Simple_repeat 2 35 0 1819 153 7 7 chr5 155378671 155378978 -47706554 - AluJb SINE Alu -5 307 1 21 0 0 0 chr5 155379229 155379250 -47706282 + AT_rich Low_complexity Low_complexity 1 21 0 411 73 0 0 chr5 155379460 155379515 -47706017 + (TG)n Simple_repeat Simple_repeat 1 55 0 2026 131 3 3 chr5 155380509 155380821 -47704711 - AluJb SINE Alu 0 312 1 1541 187 24 7 chr5 155380821 155380980 -47704552 - AluJo SINE Alu -13 299 131 2373 76 3 0 chr5 155380980 155381283 -47704249 - AluSq SINE Alu -8 305 2 1541 187 24 7 chr5 155381283 155381417 -47704115 - AluJo SINE Alu -181 131 1 216 111 0 0 chr5 155381419 155381455 -47704077 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 275 289 201 13 chr5 155385085 155385244 -47700288 - MIR SINE MIR -46 216 28 196 244 11 100 chr5 155386274 155386328 -47699204 + MIR3 SINE MIR 11 55 -153 1941 113 17 0 chr5 155386328 155386620 -47698912 + AluSx SINE Alu 2 298 -14 196 244 11 100 chr5 155386620 155386655 -47698877 + MIR3 SINE MIR 55 92 -116 205 284 147 69 chr5 155386719 155386835 -47698697 + MIR SINE MIR 22 146 -62 248 237 0 34 chr5 155387300 155387359 -47698173 - MIR SINE MIR -182 80 24 1771 130 0 74 chr5 155387627 155387853 -47697679 - AluJb SINE Alu -13 299 103 2192 83 0 20 chr5 155387853 155388153 -47697379 - AluY SINE Alu -17 294 1 1771 130 0 74 chr5 155388153 155388249 -47697283 - AluJb SINE Alu -209 103 1 411 294 55 18 chr5 155388253 155388416 -47697116 - MIR3 SINE MIR -17 191 23 340 331 142 0 chr5 155389275 155389444 -47696088 - L2 LINE L2 0 3272 3080 293 44 67 0 chr5 155389589 155389634 -47695898 + T-rich Low_complexity Low_complexity 3 50 0 2438 71 0 0 chr5 155389638 155389947 -47695585 - AluSc SINE Alu 0 309 1 284 138 0 0 chr5 155389989 155390051 -47695481 - L1MB7 LINE L1 0 6178 6117 713 114 19 0 chr5 155390116 155390221 -47695311 + AluSg/x SINE Alu 197 303 -7 817 209 70 100 chr5 155390223 155390354 -47695178 - L1ME1 LINE L1 -79 6087 5954 2131 119 0 0 chr5 155390354 155390664 -47694868 - AluSx SINE Alu -2 310 1 817 209 70 100 chr5 155390664 155390799 -47694733 - L1ME1 LINE L1 -212 5954 5828 1686 135 36 36 chr5 155390799 155391102 -47694430 - AluJo SINE Alu -9 303 1 817 209 70 100 chr5 155391102 155391135 -47694397 - L1ME1 LINE L1 -338 5828 5796 3560 194 74 31 chr5 155391145 155391337 -47694195 + MER21B LTR ERV1 12 194 -669 2208 105 3 13 chr5 155391337 155391651 -47693881 + AluSx SINE Alu 1 311 -1 3560 194 74 31 chr5 155391651 155392226 -47693306 + MER21B LTR ERV1 194 812 -51 841 167 25 6 chr5 155392239 155392401 -47693131 - L1ME1 LINE L1 -358 5806 5642 1559 190 163 29 chr5 155392401 155392673 -47692859 - L1ME1 LINE L1 -780 5366 5132 1621 194 0 0 chr5 155392673 155392952 -47692580 + AluJo SINE Alu 3 281 -31 1559 190 163 29 chr5 155392952 155393051 -47692481 - L1ME1 LINE L1 -1014 5132 5048 1809 162 23 0 chr5 155393051 155393353 -47692179 + AluJb SINE Alu 1 309 -3 1559 190 163 29 chr5 155393353 155393465 -47692067 - L1ME1 LINE L1 -1098 5048 4817 1509 196 7 10 chr5 155393631 155393932 -47691600 - AluJb SINE Alu -8 304 5 3603 161 39 41 chr5 155393937 155393963 -47691569 - MER6 DNA MER2_type -175 690 665 1745 125 54 0 chr5 155393963 155394243 -47691289 + AluSx SINE Alu 1 295 -17 2209 81 0 0 chr5 155394251 155394558 -47690974 + AluY SINE Alu 1 307 0 3603 161 39 41 chr5 155394558 155394605 -47690927 - MER6 DNA MER2_type -207 658 612 2392 63 10 0 chr5 155394605 155394906 -47690626 + AluSp SINE Alu 1 304 -9 3603 161 39 41 chr5 155394906 155395509 -47690023 - MER6 DNA MER2_type -253 612 4 218 283 0 0 chr5 155395509 155395562 -47689970 - L2 LINE L2 -73 3199 3147 2280 77 3 10 chr5 155395590 155395903 -47689629 + AluSq SINE Alu 1 311 -2 1101 57 7 0 chr5 155396030 155396170 -47689362 - AluY SINE Alu -170 141 1 2161 86 0 7 chr5 155396446 155396738 -47688794 + AluSg SINE Alu 4 293 -17 758 83 8 0 chr5 155397283 155397403 -47688129 + (TG)n Simple_repeat Simple_repeat 2 122 0 32 43 0 0 chr5 155398766 155398812 -47686720 + GC_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr5 155399027 155399058 -47686474 + GC_rich Low_complexity Low_complexity 1 31 0 342 263 46 46 chr5 155399242 155399394 -47686138 + MIR SINE MIR 40 191 -71 396 319 115 29 chr5 155400479 155400713 -47684819 - MIR SINE MIR 0 262 16 349 222 256 0 chr5 155401486 155401603 -47683929 - MIR SINE MIR -2 260 114 1360 129 0 10 chr5 155401644 155401853 -47683679 + AluJb SINE Alu 85 291 -21 184 275 101 0 chr5 155401865 155401934 -47683598 - MIR SINE MIR -51 211 136 451 313 58 19 chr5 155401944 155402152 -47683380 - MIR SINE MIR -46 216 1 216 0 0 0 chr5 155402558 155402582 -47682950 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 914 129 0 0 chr5 155402589 155402721 -47682811 - AluSx SINE Alu -38 274 143 1777 99 24 4 chr5 155402721 155402973 -47682559 - AluSg SINE Alu -53 257 1 1067 88 0 0 chr5 155403060 155403197 -47682335 - AluSx SINE Alu -176 137 1 2226 52 38 0 chr5 155403227 155403517 -47682015 + AluYa5 SINE Alu 1 301 -10 1086 135 65 14 chr5 155404242 155404457 -47681075 + AluSg/x SINE Alu 83 308 -1 186 352 127 21 chr5 155405903 155406045 -47679487 - MIR SINE MIR -3 259 103 2228 61 25 0 chr5 155406133 155406436 -47679096 - AluY SINE Alu 0 310 1 2300 71 10 0 chr5 155406452 155406746 -47678786 - AluSp SINE Alu -16 297 1 2115 108 0 0 chr5 155406759 155407046 -47678486 - AluSx SINE Alu -25 287 1 443 232 226 12 chr5 155408404 155408568 -47676964 + MIR SINE MIR 51 249 -13 23 33 0 0 chr5 155411689 155411719 -47673813 + GC_rich Low_complexity Low_complexity 1 30 0 417 248 39 10 chr5 155412639 155412741 -47672791 - L2 LINE L2 -22 3291 3146 659 254 292 11 chr5 155412838 155413175 -47672357 - L2 LINE L2 -248 3024 2783 1881 125 7 3 chr5 155413175 155413471 -47672061 + AluJo SINE Alu 1 297 -15 659 254 292 11 chr5 155413471 155413650 -47671882 - L2 LINE L2 -489 2783 2301 347 244 13 13 chr5 155413735 155413813 -47671719 - MIR SINE MIR -61 147 70 2201 90 0 0 chr5 155414160 155414460 -47671072 - AluY SINE Alu -9 302 3 984 83 8 0 chr5 155414537 155414669 -47670863 + AluSq/x SINE Alu 1 133 -180 204 125 0 0 chr5 155414669 155414701 -47670831 + (A)n Simple_repeat Simple_repeat 1 32 0 1104 225 33 52 chr5 155414961 155415268 -47670264 - AluSx SINE Alu -1 301 1 811 167 0 7 chr5 155415469 155415613 -47669919 + AluSq SINE Alu 27 169 -144 717 292 67 21 chr5 155415708 155415883 -47669649 + MIR SINE MIR 4 195 -67 2051 108 0 3 chr5 155415883 155416192 -47669340 + AluSq SINE Alu 1 308 0 717 292 67 21 chr5 155416192 155416255 -47669277 + MIR SINE MIR 195 254 -8 280 253 13 27 chr5 155416304 155416379 -47669153 - L3 LINE CR1 -136 1441 1368 198 0 0 0 chr5 155417245 155417267 -47668265 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 368 216 10 72 chr5 155420504 155420601 -47664931 - MIR SINE MIR -124 138 48 343 343 44 10 chr5 155421097 155421239 -47664293 - MIR3 SINE MIR -28 180 35 322 258 86 0 chr5 155421278 155421371 -47664161 + LTR50 LTR ERVL 1 101 -694 416 323 62 0 chr5 155421844 155422039 -47663493 + LTR33A LTR ERVL 315 521 -2 232 300 113 107 chr5 155422143 155422480 -47663052 - L2 LINE L2 0 3272 2934 751 158 0 68 chr5 155422504 155422650 -47662882 + MLT1C LTR MaLR 1 136 -331 2518 163 45 38 chr5 155422816 155423362 -47662170 - L1MB7 LINE L1 -205 5979 5431 1823 141 3 46 chr5 155423362 155423688 -47661844 - AluSx SINE Alu 0 312 1 2518 163 45 38 chr5 155423688 155423826 -47661706 - L1MB7 LINE L1 -753 5431 5295 647 261 48 88 chr5 155423828 155424203 -47661329 - MER115 DNA AcHobo -86 607 248 277 279 22 37 chr5 155424181 155424317 -47661215 - MER115 DNA AcHobo -548 145 12 * 828 121 8 8 chr5 155424396 155424528 -47661004 + AluJo/FLAM SINE Alu 2 133 -169 1614 171 24 0 chr5 155424531 155424823 -47660709 + AluSx SINE Alu 1 299 -13 2062 103 7 0 chr5 155424847 155425137 -47660395 + AluSp SINE Alu 2 293 -20 321 244 30 89 chr5 155425494 155425629 -47659903 + L1MEc LINE L1 2091 2217 -4179 372 289 152 34 chr5 155426077 155426281 -47659251 + MIR SINE MIR 35 262 0 629 294 5 28 chr5 155426492 155426710 -47658822 + ERVL LTR ERVL 5213 5425 -339 2044 221 50 114 chr5 155427023 155427809 -47657723 + LTR41 LTR ERVL 6 740 -33 2789 182 134 108 chr5 155427812 155428015 -47657517 + L1MC3 LINE L1 6691 6887 -898 2071 113 3 3 chr5 155428015 155428315 -47657217 + AluSx SINE Alu 1 300 -12 2789 182 134 108 chr5 155428315 155428492 -47657040 + L1MC3 LINE L1 6887 7058 -727 289 258 0 54 chr5 155428492 155428585 -47656947 + MLT1F1 LTR MaLR 35 122 -445 2789 182 134 108 chr5 155428585 155429177 -47656355 + L1MC3 LINE L1 7058 7784 -1 384 302 71 0 chr5 155430654 155430780 -47654752 - MIR SINE MIR -109 153 19 1277 176 0 9 chr5 155431708 155431930 -47653602 - AluJb SINE Alu -88 224 5 1937 156 0 0 chr5 155431936 155432237 -47653295 - AluSx SINE Alu -11 301 1 602 130 26 94 chr5 155432399 155432470 -47653062 - MLT1A1 LTR MaLR 0 386 312 2243 119 0 0 chr5 155432470 155432782 -47652750 - AluSx SINE Alu 0 312 1 602 130 26 94 chr5 155432782 155432877 -47652655 - MLT1A1 LTR MaLR -74 312 223 1527 132 3 68 chr5 155433130 155433440 -47652092 - AluSx SINE Alu -22 290 1 945 210 0 0 chr5 155433456 155433637 -47651895 + AluJb SINE Alu 132 312 0 338 349 64 83 chr5 155434529 155434808 -47650724 - L2 LINE L2 -21 3251 2968 378 0 0 0 chr5 155434808 155434850 -47650682 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 1635 156 18 14 chr5 155434854 155435130 -47650402 - AluJb SINE Alu -35 277 1 338 349 64 83 chr5 155435130 155435266 -47650266 - L2 LINE L2 -307 2965 2839 2140 82 17 7 chr5 155435340 155435633 -47649899 + AluY SINE Alu 1 296 -15 664 202 0 0 chr5 155435767 155435886 -47649646 - FLAM_A SINE Alu -16 126 8 1775 137 65 0 chr5 155436381 155436659 -47648873 - AluJb SINE Alu -16 296 1 2235 107 0 0 chr5 155436673 155436981 -47648551 - AluSc SINE Alu -1 308 1 23 0 0 0 chr5 155438182 155438205 -47647327 + AT_rich Low_complexity Low_complexity 1 23 0 2115 130 0 0 chr5 155439326 155439634 -47645898 + AluSx SINE Alu 1 308 -4 336 192 147 34 chr5 155440002 155440179 -47645353 + Charlie7 DNA MER1_type 2411 2607 -5 1146 211 151 24 chr5 155440488 155440683 -47644849 - MLT1A2 LTR MaLR 0 374 205 2251 64 7 0 chr5 155440683 155440992 -47644540 + AluY SINE Alu 1 311 0 1146 211 151 24 chr5 155440992 155441127 -47644405 - MLT1A2 LTR MaLR -169 205 1 214 191 0 0 chr5 155441381 155441423 -47644109 + MIR SINE MIR 81 122 -140 518 298 118 17 chr5 155442470 155442708 -47642824 + MIR SINE MIR 1 262 0 812 161 0 0 chr5 155442830 155442960 -47642572 + FLAM_C SINE Alu 1 130 -13 2252 41 38 7 chr5 155443456 155443748 -47641784 - AluY SINE Alu -10 301 1 607 77 0 0 chr5 155443769 155443847 -47641685 + AluSg/x SINE Alu 212 289 -20 1880 122 56 0 chr5 155443936 155444224 -47641308 + AluSx SINE Alu 1 304 -8 450 311 43 19 chr5 155444274 155444435 -47641097 - MIR SINE MIR -80 182 18 1906 139 3 7 chr5 155445481 155445784 -47639748 - AluSx SINE Alu -9 303 2 434 334 35 98 chr5 155446039 155446356 -47639176 - L2 LINE L2 -5 3267 2971 231 289 93 45 chr5 155446606 155446852 -47638680 - L2 LINE L2 -785 2529 2272 283 210 16 16 chr5 155447507 155447569 -47637963 - L2 LINE L2 -952 2362 2301 326 242 13 13 chr5 155447649 155447732 -47637800 - MIR SINE MIR -61 147 70 2163 99 0 0 chr5 155448078 155448380 -47637152 - AluY SINE Alu -9 302 1 932 107 23 0 chr5 155448403 155448534 -47636998 - AluSq/x SINE Alu -178 134 1 2145 117 0 0 chr5 155449161 155449469 -47636063 - AluSx SINE Alu -4 308 1 1990 124 0 0 chr5 155449485 155449768 -47635764 - AluSg SINE Alu -27 283 1 485 114 61 0 chr5 155449941 155450042 -47635490 + L1MB8 LINE L1 5823 5930 -236 477 261 14 36 chr5 155450089 155450227 -47635305 - AluSq/x SINE Alu -176 136 2 1259 160 112 7 chr5 155450272 155450541 -47634991 - AluJb SINE Alu -15 297 1 782 171 0 0 chr5 155450569 155450686 -47634846 + FLAM_C SINE Alu 1 117 -16 26 0 0 0 chr5 155450686 155450712 -47634820 + AT_rich Low_complexity Low_complexity 1 26 0 180 158 0 0 chr5 155450724 155450762 -47634770 + (TTA)n Simple_repeat Simple_repeat 2 39 0 421 284 22 8 chr5 155450765 155450899 -47634633 + MIR SINE MIR 114 249 -13 1966 109 21 3 chr5 155452067 155452351 -47633181 - AluSq SINE Alu -18 295 7 1681 107 4 16 chr5 155452765 155453018 -47632514 - AluSx SINE Alu -24 288 39 457 335 101 38 chr5 155453255 155453417 -47632115 - L2 LINE L2 -7 3306 3156 2099 115 3 0 chr5 155453417 155453713 -47631819 + AluSx SINE Alu 1 297 -15 457 335 101 38 chr5 155453713 155453977 -47631555 - L2 LINE L2 -157 3156 2853 240 200 127 0 chr5 155454022 155454077 -47631455 - FAM SINE Alu -6 173 112 479 286 27 7 chr5 155454273 155454420 -47631112 - FRAM SINE Alu -26 150 1 797 152 76 14 chr5 155454431 155454576 -47630956 - MLT1A2 LTR MaLR -220 154 1 200 167 28 0 chr5 155454875 155454911 -47630621 + MIR SINE MIR 218 254 -8 196 375 167 0 chr5 155455505 155455673 -47629859 - L3b LINE CR1 -95 1488 1293 836 155 42 62 chr5 155455723 155455854 -47629678 + MER5A DNA MER1_type 1 128 -61 1807 163 7 7 chr5 155455854 155456160 -47629372 - AluJb SINE Alu -6 306 1 836 155 42 62 chr5 155456160 155456221 -47629311 + MER5A DNA MER1_type 128 189 0 634 114 23 15 chr5 155456712 155456843 -47628689 + CT-rich Low_complexity Low_complexity 1 132 0 1747 126 81 0 chr5 155456845 155457130 -47628402 - AluSx SINE Alu -4 308 1 2281 94 13 0 chr5 155457247 155457556 -47627976 - AluSp SINE Alu 0 313 1 1331 262 91 3 chr5 155458006 155458549 -47626983 - L2 LINE L2 -106 3207 2615 558 191 9 9 chr5 155458590 155458695 -47626837 + MLT1J LTR MaLR 71 175 -336 2096 101 3 0 chr5 155458695 155458991 -47626541 + AluSg SINE Alu 1 297 -13 713 130 0 24 chr5 155458999 155459122 -47626410 + L1MA9 LINE L1 6161 6280 -32 641 118 0 0 chr5 155459127 155459212 -47626320 - AluY SINE Alu -225 86 2 1477 155 83 4 chr5 155459218 155459482 -47626050 - AluSx SINE Alu -20 292 8 1465 246 249 14 chr5 155459498 155460188 -47625344 - L2 LINE L2 -679 2635 1784 2076 105 7 0 chr5 155461365 155461660 -47623872 + AluSx SINE Alu 1 297 -15 939 141 0 0 chr5 155461685 155461834 -47623698 - L1MB3 LINE L1 -31 6152 6004 904 143 0 0 chr5 155461902 155462035 -47623497 - FLAM_A SINE Alu 0 133 1 287 211 75 98 chr5 155462042 155462175 -47623357 - MIR3 SINE MIR -67 141 12 1894 106 75 0 chr5 155462718 155463000 -47622532 + AluSc SINE Alu 1 303 -6 602 194 20 119 chr5 155463426 155463627 -47621905 + MIR SINE MIR 76 256 -6 996 149 6 0 chr5 155463780 155463948 -47621584 - AluSg/x SINE Alu -7 303 135 245 255 21 45 chr5 155464244 155464392 -47621140 - L2 LINE L2 -2 3311 3119 582 283 103 94 chr5 155464443 155464690 -47620842 - L2 LINE L2 -518 2796 2553 1894 127 69 0 chr5 155464690 155464981 -47620551 + AluSx SINE Alu 1 311 -1 582 283 103 94 chr5 155464981 155465402 -47620130 - L2 LINE L2 -761 2553 2122 4750 151 37 118 chr5 155465419 155465508 -47620024 + Charlie1a DNA MER1_type 1 96 -2665 1652 159 3 19 chr5 155465508 155465822 -47619710 - AluJb SINE Alu -3 309 1 4750 151 37 118 chr5 155465822 155466099 -47619433 + Charlie1a DNA MER1_type 96 394 -2367 2089 99 3 0 chr5 155466099 155466383 -47619149 + AluSp SINE Alu 2 286 -27 4750 151 37 118 chr5 155466383 155466545 -47618987 + Charlie1a DNA MER1_type 394 568 -2193 204 40 0 0 chr5 155466545 155466570 -47618962 + (TG)n Simple_repeat Simple_repeat 2 26 0 4750 151 37 118 chr5 155466570 155466593 -47618939 + Charlie1a DNA MER1_type 568 591 -2170 1761 159 3 16 chr5 155466593 155466908 -47618624 - AluJb SINE Alu 0 312 2 4750 151 37 118 chr5 155466908 155467535 -47617997 + Charlie1a DNA MER1_type 591 1086 -369 548 153 92 0 chr5 155467572 155467670 -47617862 + AluSq/x SINE Alu 2 108 -204 2025 125 10 16 chr5 155467676 155467989 -47617543 + AluSx SINE Alu 1 311 -1 1186 140 39 112 chr5 155468011 155468241 -47617291 + Charlie1a DNA MER1_type 1125 1321 -1440 577 176 0 0 chr5 155468241 155468343 -47617189 - U13 snRNA snRNA -2 102 1 1186 140 39 112 chr5 155468343 155468468 -47617064 + Charlie1a DNA MER1_type 1321 1454 -1 1136 199 4 4 chr5 155468470 155468701 -47616831 - AluJb SINE Alu -7 305 75 2099 120 0 0 chr5 155468734 155469035 -47616497 + AluSx SINE Alu 6 306 -6 1632 131 6 88 chr5 155469843 155470171 -47615361 - AluSx SINE Alu -11 301 1 459 123 0 0 chr5 155470746 155470827 -47614705 + (TC)n Simple_repeat Simple_repeat 2 82 0 1843 121 0 33 chr5 155471700 155472005 -47613527 - AluSx SINE Alu 0 312 18 267 292 88 0 chr5 155472353 155472466 -47613066 + L2 LINE L2 3149 3271 -1 2082 102 0 3 chr5 155472605 155472889 -47612643 - AluSq SINE Alu -30 283 1 204 338 62 12 chr5 155472908 155472988 -47612544 + L2 LINE L2 3138 3221 -51 2403 152 9 45 chr5 155473107 155473157 -47612375 + MER65A LTR ERV1 1 51 -394 2269 103 0 0 chr5 155473157 155473468 -47612064 + AluY SINE Alu 1 311 0 2403 152 9 45 chr5 155473468 155473749 -47611783 + MER65A LTR ERV1 51 341 -104 2068 140 0 0 chr5 155473749 155474056 -47611476 + AluJb SINE Alu 1 307 -5 2000 123 3 3 chr5 155474057 155474357 -47611175 + AluSx SINE Alu 1 300 -12 2403 152 9 45 chr5 155474357 155474484 -47611048 + MER65A LTR ERV1 340 445 0 693 121 0 0 chr5 155474976 155475075 -47610457 + AluJb SINE Alu 207 305 -7 609 226 121 35 chr5 155475175 155475581 -47609951 + LTR48 LTR ERV1 1 539 -105 1645 147 3 35 chr5 155475759 155476045 -47609487 - AluJo SINE Alu -13 299 23 180 373 39 0 chr5 155476406 155476508 -47609024 - L3b LINE CR1 -311 1272 1167 1969 129 6 6 chr5 155477235 155477546 -47607986 + AluSx SINE Alu 1 311 -1 497 300 157 18 chr5 155477568 155477791 -47607741 + MIR SINE MIR 8 261 -1 22 0 0 0 chr5 155477849 155477871 -47607661 + AT_rich Low_complexity Low_complexity 1 22 0 2298 109 35 5 chr5 155478364 155478731 -47606801 + L1PA13 LINE L1 5784 6161 -2 853 190 33 12 chr5 155478762 155478986 -47606546 - L1MB1 LINE L1 -571 5597 5339 2556 195 33 16 chr5 155478986 155479531 -47606001 + L1MB1 LINE L1 5611 6168 0 269 336 7 0 chr5 155479911 155480048 -47605484 + (CA)n Simple_repeat Simple_repeat 2 139 0 189 107 0 0 chr5 155480193 155480221 -47605311 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 288 91 0 0 chr5 155480561 155480605 -47604927 + (CA)n Simple_repeat Simple_repeat 2 45 0 650 122 0 98 chr5 155481438 155481561 -47603971 + FLAM_A SINE Alu 6 116 -26 324 83 0 0 chr5 155481569 155481617 -47603915 + (GA)n Simple_repeat Simple_repeat 1 48 0 321 26 0 0 chr5 155482260 155482298 -47603234 + (TG)n Simple_repeat Simple_repeat 2 39 0 451 232 37 111 chr5 155482586 155482776 -47602756 - L2 LINE L2 -4 3309 3134 263 250 50 0 chr5 155482793 155482853 -47602679 + MER58A DNA MER1_type 5 67 -40 1050 187 109 50 chr5 155482873 155483156 -47602376 + AluJo SINE Alu 6 305 -7 195 42 0 0 chr5 155483171 155483195 -47602337 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 336 312 147 30 chr5 155483219 155483450 -47602082 - L1MC4a LINE L1 -1614 6194 5937 439 346 87 13 chr5 155483463 155483694 -47601838 - L2 LINE L2 -240 3073 2826 1990 124 0 0 chr5 155483731 155484014 -47601518 + AluSg SINE Alu 1 283 -27 2309 80 0 3 chr5 155484030 155484332 -47601200 + AluSq SINE Alu 1 301 -12 736 208 95 0 chr5 155484932 155485100 -47600432 + MER3 DNA MER1_type 1 184 -25 922 113 299 0 chr5 155485467 155485644 -47599888 + MER30 DNA MER1_type 1 230 0 2030 134 0 0 chr5 155485859 155486166 -47599366 - AluSx SINE Alu -5 307 1 1186 139 50 63 chr5 155486193 155486431 -47599101 - AluJo SINE Alu -43 269 35 499 339 106 0 chr5 155486477 155486704 -47598828 - MIR SINE MIR 0 262 12 266 233 86 17 chr5 155486798 155486914 -47598618 + L1MC/D LINE L1 5635 5758 -2050 864 183 46 0 chr5 155487489 155487642 -47597890 - AluJb SINE Alu -24 288 129 2065 122 0 6 chr5 155487666 155487977 -47597555 + AluSp SINE Alu 1 309 -4 1963 130 3 7 chr5 155489665 155489964 -47595568 + AluSx SINE Alu 1 298 -14 1813 121 3 46 chr5 155489977 155490300 -47595232 + AluSp SINE Alu 1 309 -4 1754 133 111 13 chr5 155491091 155491406 -47594126 + L1MB7 LINE L1 5558 5903 -281 477 261 14 36 chr5 155491476 155491614 -47593918 - AluSq/x SINE Alu -177 136 2 1259 160 112 7 chr5 155491659 155491928 -47593604 - AluJb SINE Alu -15 297 1 771 146 7 83 chr5 155491956 155492100 -47593432 + FLAM_C SINE Alu 1 133 0 1966 109 21 3 chr5 155492258 155492542 -47592990 - AluSq SINE Alu -18 295 7 1902 117 3 14 chr5 155492956 155493247 -47592285 - AluSx SINE Alu -24 288 1 1982 110 24 0 chr5 155493411 155493576 -47591956 - AluSq SINE Alu -14 299 122 279 0 0 0 chr5 155493576 155493607 -47591925 + (TG)n Simple_repeat Simple_repeat 2 32 0 1982 110 24 0 chr5 155493607 155493733 -47591799 - AluSq SINE Alu -190 123 1 1507 161 86 0 chr5 155493733 155494012 -47591520 - AluJb SINE Alu -8 304 1 2196 95 3 3 chr5 155494675 155494970 -47590562 - AluSc SINE Alu -14 295 1 884 135 0 0 chr5 155494973 155495106 -47590426 - AluSq/x SINE Alu -180 133 1 1580 140 72 3 chr5 155495156 155495448 -47590084 + AluSx SINE Alu 1 312 0 942 161 57 10 chr5 155496089 155496282 -47589250 - MER20 DNA MER1_type -1 218 17 2311 44 20 3 chr5 155497955 155498248 -47587284 + AluY SINE Alu 1 298 -13 2126 76 21 0 chr5 155498376 155498666 -47586866 - AluSc SINE Alu -13 296 1 352 253 11 11 chr5 155498691 155498778 -47586754 - L2 LINE L2 0 3313 3227 855 103 17 0 chr5 155499180 155499296 -47586236 + AluJo/FLAM SINE Alu 1 118 -184 1551 125 4 43 chr5 155499298 155499577 -47585955 - AluSx SINE Alu -44 268 1 180 0 0 0 chr5 155499579 155499599 -47585933 + (T)n Simple_repeat Simple_repeat 1 20 0 1424 164 48 45 chr5 155499604 155499914 -47585618 + AluJb SINE Alu 1 311 -1 403 184 10 10 chr5 155499914 155500012 -47585520 + GA-rich Low_complexity Low_complexity 2 99 0 1800 115 0 56 chr5 155500015 155500320 -47585212 + AluSx SINE Alu 1 288 -24 874 117 0 29 chr5 155500327 155500464 -47585068 - FLAM_C SINE Alu 0 133 1 205 275 87 80 chr5 155500534 155500672 -47584860 + L2 LINE L2 3132 3270 -2 278 261 11 57 chr5 155501312 155501400 -47584132 + L3 LINE CR1 1493 1576 -1 2088 107 0 0 chr5 155501417 155501708 -47583824 - AluSx SINE Alu -21 291 1 2150 100 17 0 chr5 155501747 155502048 -47583484 + AluSq SINE Alu 1 306 -7 831 162 117 13 chr5 155502057 155502211 -47583321 + FAM SINE Alu 4 173 -2 457 335 101 38 chr5 155502256 155502520 -47583012 + L2 LINE L2 2853 3156 -157 2099 115 3 0 chr5 155502520 155502816 -47582716 - AluSx SINE Alu -15 297 1 457 335 101 38 chr5 155502816 155502978 -47582554 + L2 LINE L2 3156 3306 -7 2010 84 0 0 chr5 155503215 155503477 -47582055 + AluSx SINE Alu 39 300 -12 22 0 0 0 chr5 155503819 155503841 -47581691 + AT_rich Low_complexity Low_complexity 1 22 0 2005 139 0 3 chr5 155503937 155504246 -47581286 - AluSx SINE Alu -4 308 1 297 0 0 0 chr5 155504679 155504712 -47580820 + (CA)n Simple_repeat Simple_repeat 1 33 0 252 0 0 0 chr5 155504711 155504739 -47580793 + (CTG)n Simple_repeat Simple_repeat 3 30 0 * 893 149 48 12 chr5 155507541 155507709 -47577823 + MLT1A2 LTR MaLR 1 174 -200 676 141 0 0 chr5 155507754 155507853 -47577679 + MLT1A2 LTR MaLR 288 386 -4 1121 237 127 31 chr5 155507861 155508278 -47577254 + LTR16A1 LTR ERVL 1 457 0 1942 126 23 0 chr5 155508953 155509254 -47576278 - AluSx SINE Alu -4 308 1 1844 143 10 7 chr5 155509761 155510054 -47575478 + AluSx SINE Alu 2 295 -17 871 124 0 15 chr5 155510182 155510319 -47575213 + AluJo SINE Alu 1 135 -177 2144 123 0 7 chr5 155510346 155510477 -47575055 + AluSg SINE Alu 2 132 -178 2182 79 17 0 chr5 155510477 155510767 -47574765 + AluY SINE Alu 2 296 -15 2144 123 0 7 chr5 155510767 155510945 -47574587 + AluSg SINE Alu 132 309 -1 934 326 17 22 chr5 155510983 155511342 -47574190 - MLT1K LTR MaLR -163 425 69 1893 128 30 0 chr5 155511457 155511761 -47573771 + AluSq SINE Alu 1 313 0 214 241 19 0 chr5 155511949 155512003 -47573529 + L2 LINE L2 3211 3265 -7 1871 154 0 0 chr5 155512361 155512654 -47572878 - AluJo SINE Alu -19 293 1 297 109 0 0 chr5 155513115 155513161 -47572371 + (TG)n Simple_repeat Simple_repeat 2 47 0 1398 192 43 0 chr5 155513416 155513692 -47571840 - AluJo SINE Alu -11 301 14 374 297 99 18 chr5 155514499 155514669 -47570863 + MIR SINE MIR 30 211 -51 547 251 158 5 chr5 155515235 155515450 -47570082 - MIR SINE MIR 0 262 15 197 376 32 26 chr5 155515952 155516141 -47569391 + L2 LINE L2 2566 2755 -559 272 326 180 50 chr5 155516418 155516679 -47568853 - L2 LINE L2 0 3272 2978 364 265 133 54 chr5 155517645 155517811 -47567721 + MIR SINE MIR 34 212 -50 347 123 0 0 chr5 155517969 155518026 -47567506 + Alu SINE Alu 244 300 -1 31 0 0 0 chr5 155518026 155518057 -47567475 + AT_rich Low_complexity Low_complexity 1 31 0 1474 181 7 40 chr5 155518341 155518640 -47566892 - AluJo SINE Alu -23 289 1 1270 204 72 68 chr5 155518726 155519212 -47566320 - L1MC5 LINE L1 -723 7238 6751 375 41 0 0 chr5 155519569 155519618 -47565914 + (CA)n Simple_repeat Simple_repeat 1 49 0 2340 92 3 13 chr5 155520016 155520322 -47565210 + AluSg SINE Alu 1 303 -7 867 152 66 99 chr5 155520435 155520646 -47564886 - AluJo SINE Alu -101 211 8 1097 163 25 20 chr5 155520712 155520914 -47564618 - AluJo SINE Alu -10 302 100 1707 158 14 7 chr5 155520956 155521247 -47564285 + AluJb SINE Alu 18 310 -2 227 261 45 23 chr5 155521310 155521398 -47564134 - MIR3 SINE MIR -11 197 108 2214 121 0 3 chr5 155521820 155522125 -47563407 + AluSx SINE Alu 1 304 -8 2307 96 7 0 chr5 155522858 155523159 -47562373 + AluSg SINE Alu 1 303 -7 767 231 79 30 chr5 155523453 155523656 -47561876 + AluJb SINE Alu 2 214 -98 1138 132 11 11 chr5 155523657 155523821 -47561711 + AluJo/FRAM SINE Alu 136 302 -10 1600 138 3 53 chr5 155523821 155523920 -47561612 + AluSx SINE Alu 42 144 -168 2169 86 31 7 chr5 155523920 155524211 -47561321 + AluSq SINE Alu 4 301 -12 1600 138 3 53 chr5 155524211 155524394 -47561138 + AluSx SINE Alu 144 310 -2 404 226 230 59 chr5 155524553 155524893 -47560639 + MLT2B1 LTR ERVL 1 371 -26 318 242 236 18 chr5 155525633 155525798 -47559734 + MLT1L LTR MaLR 407 607 -8 24 0 0 0 chr5 155526136 155526160 -47559372 + AT_rich Low_complexity Low_complexity 1 24 0 534 71 0 0 chr5 155527980 155528050 -47557482 - AluSc SINE Alu -106 203 134 328 181 0 56 chr5 155528050 155528122 -47557410 - AluJ/FLAM SINE Alu -234 68 1 1905 149 10 17 chr5 155529887 155530188 -47555344 - AluJb SINE Alu -13 299 1 2309 85 41 0 chr5 155531338 155531633 -47553899 - AluY SINE Alu -4 307 1 210 71 0 0 chr5 155532090 155532118 -47553414 + (CATA)n Simple_repeat Simple_repeat 1 28 0 476 132 0 0 chr5 155532127 155532195 -47553337 - AluS SINE Alu -243 69 2 2536 65 0 0 chr5 155532732 155533025 -47552507 - AluSc SINE Alu -16 293 1 2433 60 7 10 chr5 155533057 155533355 -47552177 + AluSq SINE Alu 2 298 -15 747 208 95 0 chr5 155533958 155534126 -47551406 + MER3 DNA MER1_type 1 184 -25 929 113 299 0 chr5 155534491 155534668 -47550864 + MER30 DNA MER1_type 1 230 0 2165 134 0 0 chr5 155534883 155535190 -47550342 - AluSx SINE Alu -5 307 1 1279 139 50 63 chr5 155535217 155535455 -47550077 - AluJo SINE Alu -43 269 35 401 330 118 0 chr5 155535501 155535722 -47549810 - MIR SINE MIR 0 262 16 277 233 86 17 chr5 155535820 155535936 -47549596 + L1MC/D LINE L1 5635 5758 -2050 848 184 46 0 chr5 155536512 155536664 -47548868 - AluJb SINE Alu -25 287 129 2132 125 0 7 chr5 155536688 155536992 -47548540 + AluSp SINE Alu 1 302 -11 2100 127 3 7 chr5 155538679 155538978 -47546554 + AluSx SINE Alu 1 298 -14 1929 118 3 46 chr5 155538991 155539314 -47546218 + AluSp SINE Alu 1 309 -4 1765 133 111 13 chr5 155540105 155540420 -47545112 + L1MB7 LINE L1 5558 5903 -281 30 27 0 0 chr5 155540470 155540507 -47545025 + AT_rich Low_complexity Low_complexity 1 37 0 459 257 19 0 chr5 155540523 155540628 -47544904 - FLAM_C SINE Alu -35 108 2 1355 160 112 8 chr5 155540673 155540941 -47544591 - AluJb SINE Alu -16 296 1 738 153 7 83 chr5 155540969 155541113 -47544419 + FLAM_C SINE Alu 1 133 0 2102 107 21 3 chr5 155541271 155541560 -47543972 - AluSx SINE Alu -18 294 1 2029 117 3 14 chr5 155541969 155542260 -47543272 - AluSx SINE Alu -24 288 1 2103 110 24 0 chr5 155542424 155542589 -47542943 - AluSq SINE Alu -14 299 122 207 0 0 0 chr5 155542589 155542612 -47542920 + (TG)n Simple_repeat Simple_repeat 2 24 0 2103 110 24 0 chr5 155542612 155542738 -47542794 - AluSq SINE Alu -190 123 1 1563 164 88 0 chr5 155542738 155543011 -47542521 - AluJb SINE Alu -14 298 1 2325 95 3 3 chr5 155543674 155543969 -47541563 - AluSc SINE Alu -14 295 1 936 135 0 0 chr5 155543972 155544105 -47541427 - AluSq/x SINE Alu -180 133 1 1679 141 72 3 chr5 155544155 155544445 -47541087 + AluSx SINE Alu 1 310 -2 910 140 78 31 chr5 155545085 155545278 -47540254 - MER20 DNA MER1_type -1 218 17 2434 44 20 3 chr5 155546951 155547244 -47538288 + AluY SINE Alu 1 298 -13 2251 76 21 0 chr5 155547372 155547662 -47537870 - AluSc SINE Alu -13 296 1 314 253 11 11 chr5 155547687 155547774 -47537758 - L2 LINE L2 0 3313 3227 844 103 17 0 chr5 155548176 155548292 -47537240 + AluJo/FLAM SINE Alu 1 118 -184 1552 147 4 43 chr5 155548294 155548573 -47536959 - AluSx SINE Alu -44 268 1 180 0 0 0 chr5 155548575 155548595 -47536937 + (T)n Simple_repeat Simple_repeat 1 20 0 1535 164 48 45 chr5 155548600 155548910 -47536622 + AluJb SINE Alu 1 311 -1 382 194 10 10 chr5 155548910 155549008 -47536524 + GA-rich Low_complexity Low_complexity 2 99 0 2078 113 16 35 chr5 155549011 155549329 -47536203 + AluSx SINE Alu 1 312 0 195 129 0 0 chr5 155549579 155549610 -47535922 + (T)n Simple_repeat Simple_repeat 1 31 0 1027 91 8 0 chr5 155549610 155549742 -47535790 - AluSq/x SINE Alu -180 133 1 701 135 95 8 chr5 155549818 155549944 -47535588 + AluY SINE Alu 2 138 -173 1123 165 106 0 chr5 155550068 155550286 -47535246 + Tigger6 DNA MER2_type 1034 1274 -323 1700 174 17 7 chr5 155550286 155550573 -47534959 - AluJb SINE Alu -22 290 1 874 218 47 0 chr5 155550584 155550754 -47534778 + AluJb SINE Alu 113 290 -22 339 140 35 0 chr5 155550754 155550811 -47534721 - Tigger6 DNA MER2_type -323 1274 1216 1384 121 114 85 chr5 155550833 155550957 -47534575 + AluJb SINE Alu 24 143 -169 1805 121 33 72 chr5 155550957 155551262 -47534270 + AluSx SINE Alu 1 293 -19 1384 121 114 85 chr5 155551262 155551418 -47534114 + AluJb SINE Alu 143 312 0 605 132 107 66 chr5 155551450 155551571 -47533961 - FLAM_C SINE Alu -16 127 2 1070 149 64 25 chr5 155551572 155551807 -47533725 + Tigger6 DNA MER2_type 1351 1594 -3 9355 231 76 32 chr5 155551808 155553757 -47531775 - L1MDa LINE L1 -903 5637 3484 2230 128 0 3 chr5 155553757 155554069 -47531463 - AluSx SINE Alu -1 311 1 9355 231 76 32 chr5 155554069 155555501 -47530031 - L1MDa LINE L1 -3056 3484 2117 2811 72 19 3 chr5 155555500 155555876 -47529656 - L1P4 LINE L1 -469 5699 5318 * 2424 69 7 7 chr5 155556419 155556725 -47528807 - AluY SINE Alu -5 306 1 2807 128 47 0 chr5 155556766 155557218 -47528314 - L1P4 LINE L1 -816 5330 4858 2945 86 51 7 chr5 155557218 155557643 -47527889 + L1PA13 LINE L1 5714 6162 -1 4356 187 61 31 chr5 155557648 155558613 -47526919 - L1MDa LINE L1 -4413 2127 1138 1768 192 38 24 chr5 155558613 155558982 -47526550 - MLT1A2 LTR MaLR 0 374 1 4356 187 61 31 chr5 155558982 155559238 -47526294 - L1MDa LINE L1 -5402 1138 891 1573 287 36 97 chr5 155559456 155560530 -47525002 - L1MDa LINE L1 -5547 993 20 2036 124 0 0 chr5 155561262 155561544 -47523988 - AluSq SINE Alu 0 313 32 2107 125 3 31 chr5 155562299 155562619 -47522913 + AluSx SINE Alu 2 312 0 266 296 0 0 chr5 155562854 155562935 -47522597 - MIR3 SINE MIR -15 193 113 1108 198 175 19 chr5 155563532 155563789 -47521743 + AluJo SINE Alu 1 297 -5 280 261 9 63 chr5 155564882 155564993 -47520539 - MIR SINE MIR 0 262 158 230 257 79 64 chr5 155565092 155565232 -47520300 + L2 LINE L2 52 193 -3121 2138 290 128 41 chr5 155565291 155565851 -47519681 + L2 LINE L2 1374 1884 -1430 1859 171 30 0 chr5 155565851 155566149 -47519383 + AluJo SINE Alu 1 307 -5 2138 290 128 41 chr5 155566149 155566823 -47518709 + L2 LINE L2 1884 2759 -555 2268 95 0 17 chr5 155566823 155567119 -47518413 + AluSg SINE Alu 1 291 -19 2138 290 128 41 chr5 155567119 155567353 -47518179 + L2 LINE L2 2759 2971 -343 304 181 222 0 chr5 155567753 155567825 -47517707 + L2 LINE L2 3226 3313 0 1016 160 5 57 chr5 155568912 155569106 -47516426 - AluJb SINE Alu -1 311 128 1800 163 27 7 chr5 155569147 155569447 -47516085 - AluJb SINE Alu -6 306 1 334 352 60 28 chr5 155569731 155569947 -47515585 + L3 LINE CR1 1345 1567 -10 2275 108 0 13 chr5 155569949 155570254 -47515278 - AluSx SINE Alu -11 301 1 1991 163 0 13 chr5 155570284 155570590 -47514942 + AluJo SINE Alu 1 302 -10 1518 191 43 0 chr5 155570678 155571002 -47514530 - MER58B DNA MER1_type -3 338 1 188 65 0 32 chr5 155572288 155572319 -47513213 + (TG)n Simple_repeat Simple_repeat 2 31 0 211 230 14 54 chr5 155572476 155572550 -47512982 + CT-rich Low_complexity Low_complexity 6 76 0 30 0 0 0 chr5 155572618 155572648 -47512884 + AT_rich Low_complexity Low_complexity 1 30 0 2010 125 7 10 chr5 155573488 155573785 -47511747 + AluSq SINE Alu 5 300 -13 1613 183 33 11 chr5 155573787 155574061 -47511471 - AluJo SINE Alu -32 280 1 1172 84 116 47 chr5 155574969 155575101 -47510431 - MER30 DNA MER1_type 0 230 76 1941 124 10 42 chr5 155575101 155575407 -47510125 - AluSx SINE Alu -16 296 1 1172 84 116 47 chr5 155575407 155575489 -47510043 - MER30 DNA MER1_type -154 76 1 398 306 15 0 chr5 155576602 155576736 -47508796 - MIR SINE MIR -13 249 114 180 158 0 0 chr5 155576739 155576777 -47508755 + (TAA)n Simple_repeat Simple_repeat 2 39 0 30 58 0 14 chr5 155576789 155576815 -47508717 + AT_rich Low_complexity Low_complexity 1 26 -42 767 145 0 0 chr5 155576815 155576932 -47508600 - FLAM_C SINE Alu -16 117 1 30 58 0 14 chr5 155576932 155576974 -47508558 + AT_rich Low_complexity Low_complexity 26 68 0 299 184 0 0 chr5 155576974 155577023 -47508509 - MER57A LTR ERV1 -60 343 295 239 271 62 21 chr5 155577118 155577214 -47508318 - MIR SINE MIR -111 151 52 191 333 37 0 chr5 155579490 155579544 -47505988 - L2 LINE L2 -11 3302 3247 342 323 65 49 chr5 155581361 155581624 -47503908 - L2 LINE L2 0 3313 3047 344 158 122 24 chr5 155581648 155581730 -47503802 + AluJb SINE Alu 213 302 0 216 0 0 0 chr5 155581756 155581780 -47503752 + (TG)n Simple_repeat Simple_repeat 1 24 0 1616 128 128 0 chr5 155581781 155582046 -47503486 - AluSx SINE Alu -3 299 1 250 289 35 64 chr5 155583084 155583257 -47502275 + L2 LINE L2 2553 2720 -594 216 0 0 0 chr5 155583326 155583350 -47502182 + (TTA)n Simple_repeat Simple_repeat 3 26 0 2165 125 0 0 chr5 155583353 155583640 -47501892 - AluSx SINE Alu -25 287 1 193 182 0 45 chr5 155583664 155583708 -47501824 + MIR SINE MIR 108 149 -59 712 214 115 22 chr5 155584052 155584234 -47501298 + MIR SINE MIR 7 205 -57 267 208 32 120 chr5 155584252 155584377 -47501155 + MIR SINE MIR 78 191 -71 1049 171 6 0 chr5 155584704 155584880 -47500652 - MER69A DNA AcHobo 0 177 1 226 224 0 0 chr5 155585661 155585710 -47499822 + (TG)n Simple_repeat Simple_repeat 1 49 0 211 238 48 0 chr5 155586307 155586370 -47499162 + GA-rich Low_complexity Low_complexity 1 66 0 2206 92 0 0 chr5 155586388 155586661 -47498871 + AluSg SINE Alu 1 273 -37 194 0 39 0 chr5 155586679 155586705 -47498827 + (GAA)n Simple_repeat Simple_repeat 2 28 0 989 126 0 0 chr5 155586972 155587107 -47498425 + FLAM_C SINE Alu 9 143 0 393 322 100 34 chr5 155587606 155587659 -47497873 - MIR SINE MIR 0 262 214 1397 214 73 0 chr5 155587659 155587948 -47497584 - AluJo SINE Alu -2 310 1 393 322 100 34 chr5 155587948 155588133 -47497399 - MIR SINE MIR -48 214 8 1169 126 35 0 chr5 155589149 155589323 -47496209 + AluSx SINE Alu 1 180 -132 412 283 40 0 chr5 155589532 155589684 -47495848 + (CCCTAG)n Simple_repeat Simple_repeat 3 160 0 198 150 0 90 chr5 155589724 155589891 -47495641 + (CCCTG)n Simple_repeat Simple_repeat 5 156 0 262 261 79 6 chr5 155589947 155590112 -47495420 + (CCCTAG)n Simple_repeat Simple_repeat 2 178 0 * 263 208 0 96 chr5 155590002 155590180 -47495352 + (CCCTG)n Simple_repeat Simple_repeat 1 161 0 341 298 54 0 chr5 155590319 155590487 -47495045 + (CTAGGG)n Simple_repeat Simple_repeat 1 177 0 348 234 32 11 chr5 155590696 155590790 -47494742 - MIR SINE MIR -75 187 92 1898 114 0 8 chr5 155590792 155591047 -47494485 + AluJb SINE Alu 17 269 -43 372 228 188 0 chr5 155591047 155591148 -47494384 + L2 LINE L2 3193 3312 -1 465 300 92 50 chr5 155592425 155592447 -47493085 + MIR SINE MIR 13 33 -229 2103 122 30 0 chr5 155592447 155592742 -47492790 + AluSg SINE Alu 1 304 -6 465 300 92 50 chr5 155592742 155592896 -47492636 + MIR SINE MIR 33 204 -58 2369 87 3 16 chr5 155592896 155593206 -47492326 + AluSc SINE Alu 2 307 -2 465 300 92 50 chr5 155593206 155593268 -47492264 + MIR SINE MIR 204 262 0 731 215 41 6 chr5 155593368 155593540 -47491992 + MER5B DNA MER1_type 1 178 0 1762 143 10 37 chr5 155593927 155594250 -47491282 - AluSx SINE Alu 0 312 1 300 127 0 0 chr5 155594256 155594311 -47491221 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 * 486 88 0 0 chr5 155594298 155594366 -47491166 + (TC)n Simple_repeat Simple_repeat 1 68 0 249 204 0 0 chr5 155594366 155594420 -47491112 - AluJ/monomer SINE Alu -1 301 248 719 90 0 0 chr5 155594420 155594520 -47491012 - AluYb8 SINE Alu -201 117 18 1976 122 27 17 chr5 155594524 155594818 -47490714 + AluSx SINE Alu 1 297 -15 823 316 56 34 chr5 155595180 155595458 -47490074 - L2 LINE L2 -4 3309 3018 2542 78 3 0 chr5 155595458 155595766 -47489766 + AluY SINE Alu 1 309 -2 823 316 56 34 chr5 155595766 155595901 -47489631 - L2 LINE L2 -295 3018 2887 603 294 30 65 chr5 155595997 155596364 -47489168 + L2 LINE L2 2216 2569 -745 1019 278 63 57 chr5 155596504 155596578 -47488954 - L2 LINE L2 0 3313 3241 2128 138 3 0 chr5 155596578 155596875 -47488657 + AluSx SINE Alu 1 298 -14 1019 278 63 57 chr5 155596875 155596970 -47488562 - L2 LINE L2 -72 3241 3148 1554 147 127 29 chr5 155596970 155597277 -47488255 - MER1B DNA MER1_type 0 337 1 1019 278 63 57 chr5 155597277 155597355 -47488177 - L2 LINE L2 -165 3148 3072 1872 180 0 10 chr5 155597355 155597661 -47487871 - AluJo SINE Alu -9 303 1 1019 278 63 57 chr5 155597661 155597956 -47487576 - L2 LINE L2 -241 3072 2739 1213 134 30 35 chr5 155597960 155598191 -47487341 - L1PA15 LINE L1 0 6165 5936 275 326 96 15 chr5 155598325 155598460 -47487072 + L2 LINE L2 2686 2831 -483 1942 212 65 120 chr5 155598579 155599109 -47486423 - L2 LINE L2 -39 3274 2716 2489 61 3 0 chr5 155599109 155599403 -47486129 - AluY SINE Alu -16 295 1 1942 212 65 120 chr5 155599403 155599581 -47485951 - L2 LINE L2 -597 2716 2530 2361 89 3 10 chr5 155599581 155599883 -47485649 + AluSx SINE Alu 1 300 -12 1942 212 65 120 chr5 155599883 155600123 -47485409 - L2 LINE L2 -783 2530 2341 1455 189 27 43 chr5 155600123 155600424 -47485108 + AluJo SINE Alu 1 296 -16 1942 212 65 120 chr5 155600424 155600637 -47484895 - L2 LINE L2 -972 2341 2118 211 283 0 33 chr5 155600599 155600659 -47484873 - L3 LINE CR1 -940 637 580 * 1774 99 0 22 chr5 155600664 155600758 -47484774 - AluSx SINE Alu -85 227 132 2120 119 34 0 chr5 155600758 155601052 -47484480 - AluSq SINE Alu -9 304 1 1774 99 0 22 chr5 155601052 155601189 -47484343 - AluSx SINE Alu -180 132 1 1775 184 91 23 chr5 155601192 155601296 -47484236 - Charlie1b DNA MER1_type -2243 518 423 1742 178 3 16 chr5 155601296 155601600 -47483932 + AluJo SINE Alu 1 300 -12 1775 184 91 23 chr5 155601600 155601980 -47483552 - Charlie1b DNA MER1_type -2338 423 1 1030 240 55 7 chr5 155601980 155602255 -47483277 - L2 LINE L2 -1190 2124 1837 1719 176 3 19 chr5 155602350 155602370 -47483162 - AluJb SINE Alu -10 302 283 324 48 0 0 chr5 155602370 155602412 -47483120 + (TG)n Simple_repeat Simple_repeat 2 43 0 1719 176 3 19 chr5 155602412 155602698 -47482834 - AluJb SINE Alu -29 283 1 233 355 40 32 chr5 155602701 155602825 -47482707 + L2 LINE L2 3122 3246 -26 467 167 0 118 chr5 155602959 155602990 -47482542 + MER45A DNA AcHobo 40 73 -1508 2463 94 0 0 chr5 155602990 155603321 -47482211 + AluSc SINE Alu 1 309 0 467 167 0 118 chr5 155603321 155603391 -47482141 + MER45A DNA AcHobo 73 129 -49 1840 165 67 50 chr5 155603506 155603574 -47481958 - MSTA LTR MaLR 0 428 363 1919 94 100 57 chr5 155603574 155603873 -47481659 + AluSq SINE Alu 1 312 -1 1840 165 67 50 chr5 155603873 155604045 -47481487 - MSTA LTR MaLR -65 363 195 1942 130 0 46 chr5 155604045 155604203 -47481329 - AluJb SINE Alu -19 293 154 2075 119 20 3 chr5 155604203 155604496 -47481036 - AluSq SINE Alu -15 298 1 1942 130 0 46 chr5 155604496 155604644 -47480888 - AluJb SINE Alu -158 154 1 1840 165 67 50 chr5 155604644 155604821 -47480711 - MSTA LTR MaLR -233 195 3 207 259 12 47 chr5 155604833 155604918 -47480614 - L2 LINE L2 -276 2996 2915 1863 145 24 7 chr5 155604960 155605250 -47480282 - AluJb SINE Alu -13 299 5 260 330 161 0 chr5 155605358 155605476 -47480056 - L2 LINE L2 -3 3269 3133 214 57 75 57 chr5 155605680 155605733 -47479799 + T-rich Low_complexity Low_complexity 2 55 0 953 119 30 2 chr5 155605941 155606178 -47479354 + AluJo SINE Alu 11 296 -16 220 256 64 13 chr5 155606192 155606270 -47479262 + MIR3 SINE MIR 116 197 -11 192 290 206 0 chr5 155606273 155606380 -47479152 + MIR3 SINE MIR 39 167 -41 23 33 0 0 chr5 155606761 155606791 -47478741 + GC_rich Low_complexity Low_complexity 1 30 0 262 111 0 32 chr5 155606828 155606891 -47478641 + (CGGGGG)n Simple_repeat Simple_repeat 3 63 0 27 49 0 0 chr5 155607065 155607106 -47478426 + GC_rich Low_complexity Low_complexity 1 41 0 28 61 0 0 chr5 155607340 155607389 -47478143 + GC_rich Low_complexity Low_complexity 1 49 0 1836 160 14 0 chr5 155608245 155608532 -47477000 - AluJo SINE Alu -21 291 1 217 292 45 11 chr5 155608725 155608814 -47476718 - L2 LINE L2 -189 3083 2992 238 313 42 10 chr5 155609159 155609255 -47476277 + L2 LINE L2 2271 2369 -945 2022 132 0 16 chr5 155609323 155609502 -47476030 - AluSx SINE Alu 0 312 132 270 0 0 0 chr5 155609502 155609532 -47476000 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1804 124 37 7 chr5 155609532 155609805 -47475727 - AluSg SINE Alu -29 281 1 2022 132 0 16 chr5 155609805 155609935 -47475597 - AluSx SINE Alu -178 134 7 198 368 13 0 chr5 155610047 155610123 -47475409 - L2 LINE L2 -327 2945 2869 1664 180 24 14 chr5 155610391 155610686 -47474846 + AluJb SINE Alu 1 298 -14 180 111 0 0 chr5 155610686 155610713 -47474819 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 571 160 173 26 chr5 155610714 155610870 -47474662 + L1MB3 LINE L1 5953 6131 -52 546 139 0 0 chr5 155610871 155610957 -47474575 + FRAM SINE Alu 75 160 -16 191 262 145 69 chr5 155611125 155611270 -47474262 + L2 LINE L2 3115 3270 -2 1353 126 5 0 chr5 155611468 155611659 -47473873 - AluSp SINE Alu 0 313 122 1351 103 0 15 chr5 155611666 155611844 -47473688 - AluY SINE Alu -2 309 133 2379 98 3 0 chr5 155611844 155612149 -47473383 - AluSc SINE Alu -3 306 1 1351 103 0 15 chr5 155612149 155612165 -47473367 - AluY SINE Alu -178 133 118 4502 163 41 47 chr5 155612167 155612283 -47473249 - L1M4c LINE L1 -5393 991 876 2176 109 17 3 chr5 155612283 155612577 -47472955 - AluSp SINE Alu -14 299 2 4502 163 41 47 chr5 155612577 155613454 -47472078 - L1M4c LINE L1 -5508 876 4 2595 70 3 0 chr5 155613457 155613769 -47471763 - AluSp SINE Alu 0 313 1 489 102 0 153 chr5 155613769 155613847 -47471685 - L1MB2 LINE L1 -341 5830 5774 2040 122 14 17 chr5 155613847 155614141 -47471391 - AluSx SINE Alu -19 293 1 489 102 0 153 chr5 155614141 155614180 -47471352 - L1MB2 LINE L1 -397 5774 5731 245 278 100 11 chr5 155614677 155614712 -47470820 + L1ME1 LINE L1 6049 6079 -87 1944 137 24 7 chr5 155614712 155615004 -47470528 - AluSx SINE Alu -15 297 1 245 278 100 11 chr5 155615004 155615058 -47470474 + L1ME1 LINE L1 6079 6146 -20 1913 154 0 7 chr5 155615233 155615531 -47470001 - AluJb SINE Alu -16 296 1 1129 194 10 10 chr5 155616912 155617118 -47468414 - AluJo SINE Alu -106 206 1 2171 115 20 0 chr5 155617384 155617689 -47467843 + AluSx SINE Alu 1 311 -1 1346 96 0 0 chr5 155617690 155617857 -47467675 + AluSp SINE Alu 132 298 -15 2309 96 3 7 chr5 155617943 155618246 -47467286 - AluSp SINE Alu -11 302 1 1907 118 16 48 chr5 155618344 155618516 -47467016 - AluSx SINE Alu -8 304 145 2461 77 3 0 chr5 155618516 155618815 -47466717 - AluSx SINE Alu -12 300 1 1907 118 16 48 chr5 155618815 155618956 -47466576 - AluSx SINE Alu -167 145 1 2538 73 0 3 chr5 155619144 155619447 -47466085 + AluSc SINE Alu 2 303 -6 237 297 36 9 chr5 155619686 155619797 -47465735 - L2 LINE L2 -235 3037 2924 2441 66 3 7 chr5 155620508 155620811 -47464721 - AluY SINE Alu -9 302 1 259 300 160 13 chr5 155621114 155621351 -47464181 - L1MC4 LINE L1 -18 8024 7753 336 314 29 0 chr5 155621363 155621465 -47464067 + MER5A DNA MER1_type 8 112 -77 231 253 167 64 chr5 155621516 155621735 -47463797 - L1MC4a LINE L1 -173 7671 7476 1835 147 3 17 chr5 155621735 155622027 -47463505 - AluSx SINE Alu -15 297 10 231 253 167 64 chr5 155622027 155622042 -47463490 - L1MC4a LINE L1 -368 7476 7464 778 244 17 0 chr5 155622042 155622214 -47463318 - FAM SINE Alu 0 175 1 231 253 167 64 chr5 155622214 155622326 -47463206 - L1MC4a LINE L1 -380 7464 7326 918 127 7 0 chr5 155622524 155622666 -47462866 - FLAM_C SINE Alu 0 143 1 945 87 0 0 chr5 155622826 155622990 -47462542 - AluSg/x SINE Alu 0 337 174 2281 67 3 3 chr5 155622993 155623307 -47462225 - AluSp SINE Alu 0 314 1 1992 93 48 4 chr5 155623313 155623607 -47461925 - AluSq SINE Alu 0 308 3 542 274 206 29 chr5 155623952 155624145 -47461387 + L2 LINE L2 2829 2987 -326 2536 62 3 0 chr5 155624145 155624451 -47461081 + AluY SINE Alu 2 308 -3 542 274 206 29 chr5 155624451 155624665 -47460867 + L2 LINE L2 2987 3308 -5 1411 173 38 52 chr5 155624850 155625139 -47460393 - AluJo SINE Alu -6 306 22 382 267 59 22 chr5 155626320 155626455 -47459077 - MIR3 SINE MIR -15 193 54 346 243 198 40 chr5 155626699 155626876 -47458656 - L2 LINE L2 -246 3067 2863 1862 139 3 45 chr5 155627112 155627279 -47458253 - AluJo SINE Alu -15 297 147 2176 119 3 3 chr5 155627279 155627582 -47457950 - AluSx SINE Alu -9 303 1 1862 139 3 45 chr5 155627582 155627724 -47457808 - AluJo SINE Alu -165 147 1 515 251 98 100 chr5 155627744 155628028 -47457504 + Charlie8 DNA MER1_type 41 325 -2092 2405 39 43 0 chr5 155628028 155628308 -47457224 - AluY SINE Alu -19 292 1 515 251 98 100 chr5 155628308 155628482 -47457050 + Charlie8 DNA MER1_type 325 498 -1919 549 184 167 29 chr5 155628933 155629107 -47456425 - L1MC4 LINE L1 -241 7801 7604 2418 86 0 16 chr5 155629110 155629425 -47456107 - AluY SINE Alu -1 310 1 9814 28 2 217 chr5 155629443 155631208 -47454324 - SVA Other Other 0 1386 1 224 200 0 67 chr5 155631208 155631268 -47454264 + G-rich Low_complexity Low_complexity 6 61 0 2351 82 0 7 chr5 155632033 155632338 -47453194 - AluY SINE Alu -8 303 1 1971 195 98 15 chr5 155632339 155632858 -47452674 - L1MC4 LINE L1 -470 7572 7011 2150 130 0 0 chr5 155632931 155633223 -47452309 - AluSx SINE Alu -20 292 1 618 244 189 3 chr5 155633226 155633538 -47451994 - L1MC4 LINE L1 -800 7242 6873 760 159 0 0 chr5 155633593 155633706 -47451826 - FLAM_C SINE Alu -24 119 7 1617 111 4 4 chr5 155633752 155633977 -47451555 - AluSg/x SINE Alu -4 306 82 276 297 72 14 chr5 155633998 155634220 -47451312 - L1ME LINE L1 -295 5826 5592 2315 84 3 13 chr5 155634226 155634537 -47450995 - AluY SINE Alu -3 308 1 2325 93 6 6 chr5 155634547 155634860 -47450672 - AluSp SINE Alu 0 313 1 2387 65 3 19 chr5 155635313 155635620 -47449912 + AluY SINE Alu 1 302 -9 863 146 8 0 chr5 155638118 155638248 -47447284 - FLAM_C SINE Alu -12 131 1 2062 204 47 11 chr5 155638634 155639080 -47446452 - MLT1C LTR MaLR 0 467 6 2783 10 0 0 chr5 155639109 155639405 -47446127 - AluYa5 SINE Alu -15 296 1 1887 125 62 0 chr5 155639598 155639783 -47445749 - AluSx SINE Alu -5 307 96 375 78 0 0 chr5 155639783 155639834 -47445698 + (TATAG)n Simple_repeat Simple_repeat 3 53 0 1887 125 62 0 chr5 155639834 155639937 -47445595 - AluSx SINE Alu -216 96 1 1328 230 239 19 chr5 155640485 155640950 -47444582 + MLT1F1 LTR MaLR 1 567 0 562 179 41 128 chr5 155641122 155641192 -47444340 - MER58A DNA MER1_type -2198 222 147 2216 75 43 0 chr5 155641192 155641474 -47444058 + AluY SINE Alu 1 294 -17 562 179 41 128 chr5 155641474 155641598 -47443934 - MER58A DNA MER1_type -2273 147 45 181 330 77 0 chr5 155642242 155642333 -47443199 + L2 LINE L2 3161 3258 -14 970 128 12 12 chr5 155642471 155642635 -47442897 - L1MB7 LINE L1 -19 6165 6002 2254 119 0 0 chr5 155643497 155643799 -47441733 - AluSg SINE Alu -8 302 1 293 244 58 76 chr5 155643882 155644054 -47441478 - L3 LINE CR1 -115 1462 1294 2416 85 3 3 chr5 155645380 155645686 -47439846 + AluSc SINE Alu 1 306 -3 180 0 0 0 chr5 155645831 155645851 -47439681 + (T)n Simple_repeat Simple_repeat 1 20 0 760 79 0 0 chr5 155645896 155645997 -47439535 - L1PA5 LINE L1 -1 6153 6053 202 237 0 0 chr5 155646229 155646267 -47439265 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 2427 86 3 0 chr5 155648056 155648360 -47437172 - AluSx SINE Alu -7 305 1 1897 143 14 20 chr5 155648924 155649218 -47436314 + AluSx SINE Alu 14 305 -7 2397 95 7 0 chr5 155649223 155649527 -47436005 + AluSg SINE Alu 1 306 -4 341 277 154 32 chr5 155649900 155650153 -47435379 - L1ME4a LINE L1 -66 6055 5772 2342 60 42 0 chr5 155650320 155650605 -47434927 + AluY SINE Alu 1 297 -14 219 69 0 0 chr5 155651894 155651923 -47433609 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr5 155651930 155651951 -47433581 + AT_rich Low_complexity Low_complexity 1 21 0 355 297 88 0 chr5 155652254 155652402 -47433130 - MIR SINE MIR -54 208 48 42 0 0 0 chr5 155653014 155653056 -47432476 + AT_rich Low_complexity Low_complexity 1 42 0 423 195 271 0 chr5 155653083 155653201 -47432331 - AluSq/x SINE Alu -162 151 2 2187 110 7 0 chr5 155653212 155653504 -47432028 - AluSp SINE Alu -19 294 1 423 56 0 0 chr5 155653903 155653957 -47431575 + (TATG)n Simple_repeat Simple_repeat 2 55 0 1607 108 0 0 chr5 155653960 155654172 -47431360 - AluSg/x SINE Alu -30 280 69 2146 117 69 27 chr5 155654172 155654547 -47430985 + Tigger2 DNA MER2_type 748 1138 -1580 2302 90 0 27 chr5 155654558 155654859 -47430673 + AluSp SINE Alu 1 293 -20 3711 157 75 30 chr5 155654894 155655590 -47429942 - Tigger2 DNA MER2_type -1985 733 7 3502 182 75 18 chr5 155655594 155656379 -47429153 + Tigger6a DNA MER2_type 138 967 -116 722 170 30 22 chr5 155656383 155656518 -47429014 - AluJo SINE Alu -176 136 1 25 0 0 0 chr5 155656537 155656562 -47428970 + AT_rich Low_complexity Low_complexity 1 25 0 623 194 0 39 chr5 155656589 155656718 -47428814 + Tigger6a DNA MER2_type 953 1076 -7 1515 184 7 18 chr5 155656850 155657128 -47428404 - AluJb SINE Alu -18 294 20 1632 192 20 14 chr5 155657203 155657500 -47428032 - AluJb SINE Alu -13 299 1 593 274 147 45 chr5 155657583 155658006 -47427526 + L2 LINE L2 2848 3313 0 331 283 260 6 chr5 155658127 155658304 -47427228 - MIR SINE MIR -21 241 20 2880 174 84 108 chr5 155658344 155658821 -47426711 - L1MB7 LINE L1 -16 6168 5681 445 152 0 38 chr5 155658821 155658900 -47426632 - MADE1 DNA Mariner 0 80 5 2693 130 29 2 chr5 155658901 155659317 -47426215 - MSTA LTR MaLR 0 428 2 2880 174 84 108 chr5 155659317 155659649 -47425883 - L1MB7 LINE L1 -502 5682 5300 725 194 0 15 chr5 155659650 155659784 -47425748 - FLAM_A SINE Alu -3 139 8 1727 186 120 11 chr5 155659803 155660261 -47425271 - L1MB7 LINE L1 -851 5295 4788 30 27 0 0 chr5 155660785 155660822 -47424710 + AT_rich Low_complexity Low_complexity 1 37 0 287 340 0 0 chr5 155660885 155660982 -47424550 + MIR SINE MIR 55 151 -111 2241 110 13 0 chr5 155661050 155661349 -47424183 - AluSq SINE Alu -10 303 1 2243 93 0 10 chr5 155661803 155662092 -47423440 - AluSq SINE Alu -27 286 1 806 211 0 19 chr5 155663034 155663190 -47422342 - FRAM SINE Alu -23 153 1 386 233 146 0 chr5 155663802 155663905 -47421627 - L1ME LINE L1 -491 5630 5513 23 0 0 0 chr5 155663999 155664022 -47421510 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 155664573 155664595 -47420937 + AT_rich Low_complexity Low_complexity 1 22 0 4152 63 7 28 chr5 155664595 155665168 -47420364 - SVA Other Other -263 1123 563 5458 84 38 17 chr5 155665298 155666116 -47419416 - SVA Other Other -551 835 1 505 272 83 28 chr5 155667176 155667620 -47417912 - MLT1L LTR MaLR -2 613 117 1706 166 32 11 chr5 155667785 155668069 -47417463 - AluJb SINE Alu -22 290 1 277 244 49 12 chr5 155668152 155668234 -47417298 + MIR SINE MIR 157 241 -21 1045 57 0 0 chr5 155668402 155668526 -47417006 - AluSp/q SINE Alu -15 298 175 2136 122 0 0 chr5 155668904 155669199 -47416333 - AluSg SINE Alu -11 299 5 470 270 113 30 chr5 155669451 155669681 -47415851 + LTR33 LTR ERVL 3 251 -270 4012 135 56 13 chr5 155670154 155670852 -47414680 - L1MA5 LINE L1 -228 7093 6344 2020 143 7 7 chr5 155670852 155671152 -47414380 - AluSx SINE Alu -12 300 1 4012 135 56 13 chr5 155671152 155671356 -47414176 - L1MA5 LINE L1 -977 6344 6150 2088 172 44 59 chr5 155671353 155672034 -47413498 - L1MA5 LINE L1 -4399 2769 2099 * 775 167 0 148 chr5 155672034 155672244 -47413288 - AluSg/x SINE Alu -13 299 121 972 152 126 61 chr5 155672270 155672501 -47413031 - AluJo SINE Alu -1 311 66 10029 174 32 27 chr5 155672501 155673907 -47411625 - L1MA5 LINE L1 -5094 2074 651 1347 174 143 34 chr5 155673907 155674293 -47411239 + MSTA LTR MaLR 1 428 0 10029 174 32 27 chr5 155674293 155674945 -47410587 - L1MA5 LINE L1 -6517 651 4 620 235 106 6 chr5 155674945 155675115 -47410417 - MIR SINE MIR -45 217 31 367 259 46 9 chr5 155675106 155675214 -47410318 + L2 LINE L2 3202 3313 0 * 2875 6 0 0 chr5 155677827 155678138 -47407394 + AluYa5 SINE Alu 1 311 0 521 299 70 57 chr5 155678283 155678527 -47407005 - MIR SINE MIR -14 248 2 180 77 0 0 chr5 155679128 155679154 -47406378 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 343 223 78 29 chr5 155680120 155680223 -47405309 + MIR3 SINE MIR 98 205 -3 1565 165 81 0 chr5 155680967 155681228 -47404304 - AluJo SINE Alu -30 282 1 180 179 0 0 chr5 155682134 155682173 -47403359 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 330 338 35 7 chr5 155682179 155682321 -47403211 - L1MC4 LINE L1 -124 7918 7773 1937 143 14 0 chr5 155682994 155683280 -47402252 + AluJb SINE Alu 3 292 -20 2263 76 0 64 chr5 155683920 155684056 -47401476 + AluY SINE Alu 1 144 -167 2146 86 0 14 chr5 155684056 155684347 -47401185 + AluY SINE Alu 22 308 -3 2263 76 0 64 chr5 155684347 155684540 -47400992 + AluY SINE Alu 144 309 -2 656 194 97 18 chr5 155685384 155685549 -47399983 + MER5B DNA MER1_type 1 178 0 217 184 122 0 chr5 155685953 155686002 -47399530 + L2 LINE L2 3213 3267 -5 217 259 62 37 chr5 155686049 155686130 -47399402 - L2 LINE L2 -47 3266 3184 902 161 212 0 chr5 155687459 155687704 -47397828 + MER33 DNA MER1_type 1 288 -36 209 254 239 0 chr5 155688581 155688648 -47396884 - MIR SINE MIR -24 238 156 1206 192 33 103 chr5 155688929 155689413 -47396119 - LTR7 LTR ERV1 0 450 1 38 0 0 0 chr5 155689762 155689800 -47395732 + AT_rich Low_complexity Low_complexity 1 38 0 1314 158 110 81 chr5 155689801 155690022 -47395510 - L1MA9 LINE L1 -40 6272 6059 1642 180 0 18 chr5 155690022 155690300 -47395232 - AluSx SINE Alu -39 273 1 1314 158 110 81 chr5 155690300 155690497 -47395035 - L1MA9 LINE L1 -253 6059 5842 511 233 0 0 chr5 155691460 155691550 -47393982 + MER58A DNA MER1_type 2 91 -16 302 167 0 15 chr5 155691558 155691624 -47393908 + CT-rich Low_complexity Low_complexity 2 66 0 1547 181 0 11 chr5 155691652 155691922 -47393610 - AluJb SINE Alu -45 267 1 388 160 53 0 chr5 155691923 155691998 -47393534 + MER58A DNA MER1_type 140 218 -6 1171 169 5 0 chr5 155692015 155692199 -47393333 - AluSx SINE Alu -127 185 1 1450 207 32 175 chr5 155692217 155692794 -47392738 - L1M4 LINE L1 -2641 3505 2847 913 148 0 0 chr5 155692794 155692929 -47392603 - FLAM_C SINE Alu -8 135 1 1450 207 32 175 chr5 155692929 155693217 -47392315 - L1M4 LINE L1 -3299 2847 2712 1966 96 89 7 chr5 155693217 155693499 -47392033 - AluSx SINE Alu -7 305 1 1450 207 32 175 chr5 155693499 155693727 -47391805 - L1M4 LINE L1 -3434 2712 2453 244 258 75 21 chr5 155693797 155693890 -47391642 - MIR SINE MIR -81 127 30 2233 117 0 0 chr5 155695222 155695233 -47390299 - AluSx SINE Alu -13 299 289 215 79 26 0 chr5 155695233 155695271 -47390261 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2233 117 0 0 chr5 155695271 155695558 -47389974 - AluSx SINE Alu -22 290 1 1209 157 5 5 chr5 155696099 155696290 -47389242 + AluJb SINE Alu 84 274 -38 810 85 85 8 chr5 155696598 155696727 -47388805 + MER85 DNA T2_type 1 139 0 250 197 84 70 chr5 155697150 155697292 -47388240 + L1MC5 LINE L1 7753 7896 -65 21 0 0 0 chr5 155697314 155697335 -47388197 + AT_rich Low_complexity Low_complexity 1 21 0 254 102 85 0 chr5 155698070 155698129 -47387403 - MER41B LTR ERV1 -88 547 484 40 0 0 0 chr5 155698129 155698169 -47387363 + AT_rich Low_complexity Low_complexity 1 40 0 588 158 44 9 chr5 155698170 155698284 -47387248 - FLAM_C SINE Alu -15 118 1 22 56 0 0 chr5 155698698 155698734 -47386798 + AT_rich Low_complexity Low_complexity 1 36 0 2163 89 0 74 chr5 155699899 155700236 -47385296 - AluSx SINE Alu 0 312 1 572 149 8 16 chr5 155700239 155700360 -47385172 + L1MB8 LINE L1 6021 6140 -38 21 71 0 0 chr5 155700395 155700437 -47385095 + AT_rich Low_complexity Low_complexity 1 42 0 213 132 0 0 chr5 155701280 155701318 -47384214 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 731 136 0 9 chr5 155701320 155701430 -47384102 - FLAM_C SINE Alu -19 124 16 289 246 65 65 chr5 155702149 155702287 -47383245 + MIR SINE MIR 73 210 -52 2190 112 3 0 chr5 155702714 155703001 -47382531 - AluSg SINE Alu -22 288 1 195 42 0 0 chr5 155703408 155703432 -47382100 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2173 107 3 3 chr5 155705455 155705753 -47379779 + AluSx SINE Alu 1 298 -14 2094 91 3 50 chr5 155705753 155706087 -47379445 + AluSq SINE Alu 1 320 0 598 81 0 12 chr5 155707141 155707227 -47378305 - AluS SINE Alu -228 85 1 233 247 86 29 chr5 155707229 155707403 -47378129 - L1ME LINE L1 -723 5441 5258 477 233 25 0 chr5 155707617 155707737 -47377795 - MLT2F LTR ERVL -8 655 533 2326 92 0 0 chr5 155709013 155709316 -47376216 - AluSg SINE Alu -7 303 1 1647 191 6 38 chr5 155710305 155710619 -47374913 - AluJo SINE Alu -8 304 1 752 123 0 33 chr5 155711465 155711587 -47373945 - FLAM_C SINE Alu -17 126 9 506 261 36 0 chr5 155711688 155711799 -47373733 - MIR SINE MIR -147 115 1 311 251 85 70 chr5 155711872 155712071 -47373461 - L1MC4 LINE L1 -1 8041 7840 1853 188 0 0 chr5 155712106 155712404 -47373128 - AluJo SINE Alu -14 298 1 330 234 65 0 chr5 155712409 155712516 -47373016 - L1ME2 LINE L1 -1 6163 6050 2305 98 3 13 chr5 155712561 155712876 -47372656 - AluSx SINE Alu 0 312 1 689 214 131 68 chr5 155713323 155713575 -47371957 + L2 LINE L2 2139 2406 -908 1669 156 58 0 chr5 155713627 155713902 -47371630 + AluJb SINE Alu 9 299 -13 191 114 29 0 chr5 155713970 155714005 -47371527 + (TG)n Simple_repeat Simple_repeat 2 37 0 238 26 51 0 chr5 155714459 155714498 -47371034 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1525 131 30 0 chr5 155714500 155714736 -47370796 - AluSx SINE Alu -33 279 37 2039 133 0 3 chr5 155715005 155715298 -47370234 - AluSx SINE Alu -20 292 1 353 288 192 0 chr5 155716909 155717086 -47368446 - MIR SINE MIR 0 262 52 21 0 0 0 chr5 155717197 155717218 -47368314 + AT_rich Low_complexity Low_complexity 1 21 0 1843 158 0 33 chr5 155717218 155717522 -47368010 - AluJb SINE Alu -18 294 1 1071 193 83 190 chr5 155717618 155717945 -47367587 - LTR8A LTR ERV1 -4 723 362 1686 170 39 7 chr5 155717945 155718228 -47367304 - AluSx SINE Alu -20 292 1 1071 193 83 190 chr5 155718228 155718710 -47366822 - LTR8A LTR ERV1 -365 362 1 2473 71 0 0 chr5 155718780 155719089 -47366443 - AluSg1 SINE Alu 0 309 1 912 134 7 14 chr5 155720176 155720318 -47365214 + AluJb SINE Alu 1 141 -171 22 0 0 0 chr5 155720336 155720358 -47365174 + AT_rich Low_complexity Low_complexity 1 22 0 423 0 0 0 chr5 155720421 155720468 -47365064 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2040 119 21 190 chr5 155721637 155721880 -47363652 + Tigger2a DNA MER2_type 2 112 -2596 2223 124 3 0 chr5 155721880 155722187 -47363345 - AluSx SINE Alu 0 312 5 2040 119 21 190 chr5 155722187 155722464 -47363068 + Tigger2a DNA MER2_type 112 434 0 369 0 0 0 chr5 155726167 155726208 -47359324 + (TG)n Simple_repeat Simple_repeat 1 41 0 591 286 113 28 chr5 155730992 155731275 -47354257 - LTR16B LTR ERVL 0 464 158 2838 16 0 0 chr5 155731577 155731886 -47353646 - AluYb8 SINE Alu -9 309 1 1575 136 163 0 chr5 155733072 155733330 -47352202 + AluSg SINE Alu 1 300 0 1587 138 62 42 chr5 155733604 155733893 -47351639 - AluJo SINE Alu -12 300 6 1458 167 113 4 chr5 155734301 155734576 -47350956 - AluJb SINE Alu -5 307 3 1638 92 0 35 chr5 155736962 155737191 -47348341 - AluSx SINE Alu -6 306 86 655 113 47 28 chr5 155737199 155737305 -47348227 - AluSx SINE Alu -204 109 2 5265 127 35 25 chr5 155738089 155738955 -47346577 - MER4D LTR ERV1 0 903 30 26 0 0 0 chr5 155740048 155740074 -47345458 + AT_rich Low_complexity Low_complexity 1 26 0 417 289 196 31 chr5 155742076 155742270 -47343262 + MIR SINE MIR 8 233 -29 1856 116 63 36 chr5 155742677 155742979 -47342553 - AluSx SINE Alu -2 310 1 200 225 25 0 chr5 155743468 155743508 -47342024 - L2 LINE L2 -17 3255 3215 280 226 32 0 chr5 155743527 155743589 -47341943 - MIR SINE MIR -120 142 79 1171 271 150 63 chr5 155744391 155745045 -47340487 - MER21B LTR ERV1 -131 732 22 2118 119 7 0 chr5 155745618 155745913 -47339619 + AluSx SINE Alu 1 297 -15 663 95 0 11 chr5 155745952 155746047 -47339485 + MER4A LTR ERV1 1 94 -570 1932 120 35 28 chr5 155746051 155746394 -47339138 + MER4A LTR ERV1 261 664 0 261 101 58 72 chr5 155746445 155746468 -47339064 + Charlie5 DNA MER1_type 2426 2448 -176 2205 112 6 13 chr5 155746468 155746781 -47338751 - AluSx SINE Alu -1 311 1 261 101 58 72 chr5 155746781 155746826 -47338706 + Charlie5 DNA MER1_type 2448 2493 -131 2109 107 3 7 chr5 155746874 155747192 -47338340 + AluSx SINE Alu 1 312 0 236 351 78 34 chr5 155747380 155747702 -47337830 - L3 LINE CR1 -582 995 660 38 22 0 0 chr5 155747709 155747754 -47337778 + AT_rich Low_complexity Low_complexity 1 45 0 2328 91 0 13 chr5 155747754 155748061 -47337471 - AluSg SINE Alu -7 303 1 2171 105 3 7 chr5 155748063 155748358 -47337174 - AluSx SINE Alu -18 294 1 1879 158 33 3 chr5 155748415 155748718 -47336814 - AluJb SINE Alu 0 312 1 185 271 68 0 chr5 155748733 155748792 -47336740 + L2 LINE L2 2571 2633 -681 366 292 198 55 chr5 155749043 155749300 -47336232 + L2 LINE L2 3015 3308 -5 241 245 57 94 chr5 155749305 155749411 -47336121 - MER5A DNA MER1_type -3 186 85 316 327 28 0 chr5 155749744 155749851 -47335681 - L2 LINE L2 -12 3301 3192 21 57 0 0 chr5 155749852 155749887 -47335645 + AT_rich Low_complexity Low_complexity 1 35 0 686 203 0 8 chr5 155750376 155750504 -47335028 - FLAM_A SINE Alu -5 128 2 24 0 0 0 chr5 155751440 155751464 -47334068 + GC_rich Low_complexity Low_complexity 1 24 0 2249 125 110 38 chr5 155752126 155752525 -47333007 + MSTA LTR MaLR 1 428 0 553 95 0 14 chr5 155752688 155752762 -47332770 + AluJ/FRAM SINE Alu 226 298 -14 801 306 88 70 chr5 155752775 155753958 -47331574 - L1MEd LINE L1 -4870 1249 98 533 220 28 21 chr5 155753951 155754092 -47331440 - L1MB7 LINE L1 -2 6182 6041 * 186 43 0 0 chr5 155755259 155755282 -47330250 + (TTCTC)n Simple_repeat Simple_repeat 3 25 0 1924 136 10 10 chr5 155755302 155755604 -47329928 - AluSx SINE Alu -10 302 1 1033 185 10 30 chr5 155755630 155755830 -47329702 - AluJo SINE Alu -73 239 44 2597 33 3 3 chr5 155756560 155756861 -47328671 - AluY SINE Alu -8 303 3 1585 178 0 21 chr5 155758819 155758957 -47326575 + AluJb SINE Alu 1 140 -172 2510 62 0 0 chr5 155758957 155759256 -47326276 + AluY SINE Alu 1 300 -7 192 40 0 0 chr5 155759256 155759281 -47326251 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1585 178 0 21 chr5 155759285 155759433 -47326099 + AluJb SINE Alu 140 281 -31 2172 132 7 0 chr5 155761154 155761464 -47324068 - AluSx SINE Alu 0 312 1 258 327 26 0 chr5 155761493 155761606 -47323926 - Charlie8 DNA MER1_type -2278 139 24 2262 100 0 10 chr5 155762114 155762423 -47323109 - AluSx SINE Alu -4 308 3 1343 176 0 9 chr5 155763135 155763357 -47322175 - AluJb SINE Alu -88 224 5 1891 129 75 0 chr5 155763363 155763641 -47321891 - AluSg SINE Alu -11 299 1 1637 162 15 4 chr5 155763785 155764044 -47321488 + AluJo SINE Alu 15 276 -36 24 0 0 0 chr5 155764394 155764418 -47321114 + AT_rich Low_complexity Low_complexity 1 24 0 1446 170 76 14 chr5 155764749 155765025 -47320507 - AluJb SINE Alu -19 293 1 561 206 55 81 chr5 155765618 155766044 -47319488 - L1M4 LINE L1 -2527 3619 2950 1460 229 213 35 chr5 155766053 155766342 -47319190 - L2 LINE L2 -251 3062 2826 1638 192 10 0 chr5 155766342 155766633 -47318899 + AluJb SINE Alu 1 294 -18 1460 229 213 35 chr5 155766633 155766691 -47318841 - L2 LINE L2 -487 2826 2780 2348 199 82 23 chr5 155766691 155767168 -47318364 + MLT1D LTR MaLR 1 505 0 1460 229 213 35 chr5 155767168 155767663 -47317869 - L2 LINE L2 -533 2780 1984 249 209 104 43 chr5 155767673 155767788 -47317744 - L2 LINE L2 -1116 2198 2077 901 260 15 5 chr5 155767788 155768047 -47317485 + L1M4 LINE L1 3876 4138 -2008 673 339 72 60 chr5 155768349 155768701 -47316831 - L1M4 LINE L1 -1534 4612 4266 1970 120 63 14 chr5 155768701 155768985 -47316547 + AluSx SINE Alu 1 298 -14 673 339 72 60 chr5 155768985 155769248 -47316284 - L1M4 LINE L1 -1880 4266 3986 768 204 20 7 chr5 155769248 155769400 -47316132 - FRAM SINE Alu -12 154 1 673 339 72 60 chr5 155769400 155769479 -47316053 - L1M4 LINE L1 -2160 3986 3909 2185 107 0 0 chr5 155770251 155770556 -47314976 + AluY SINE Alu 1 305 0 3360 173 63 53 chr5 155770651 155771173 -47314359 + L1MB8 LINE L1 5309 5846 -332 1925 111 70 0 chr5 155771173 155771443 -47314089 + AluSg SINE Alu 1 289 -21 3360 173 63 53 chr5 155771443 155771771 -47313761 + L1MB8 LINE L1 5846 6169 -9 794 137 8 8 chr5 155771781 155771912 -47313620 - AluJo/FLAM SINE Alu -170 132 2 1237 199 0 5 chr5 155771912 155772123 -47313409 - AluJo SINE Alu -14 298 87 28 0 0 26 chr5 155772123 155772145 -47313387 + AT_rich Low_complexity Low_complexity 1 23 -15 2303 109 6 6 chr5 155772145 155772458 -47313074 - AluSp SINE Alu 0 313 1 28 0 0 26 chr5 155772458 155772474 -47313058 + AT_rich Low_complexity Low_complexity 23 38 0 2482 87 0 10 chr5 155775353 155775665 -47309867 - AluSq SINE Alu -4 309 1 2342 92 0 3 chr5 155776982 155777275 -47308257 - AluSc SINE Alu -7 302 11 330 395 57 0 chr5 155777500 155777677 -47307855 + L1MC/D LINE L1 5513 5699 -422 300 320 23 31 chr5 155777682 155777810 -47307722 + L1MC/D LINE L1 5735 5861 -1947 937 120 0 0 chr5 155778900 155779033 -47306499 - AluSg/x SINE Alu -2 308 176 180 143 0 0 chr5 155779639 155779681 -47305851 + (T)n Simple_repeat Simple_repeat 1 42 0 424 296 260 12 chr5 155781350 155781762 -47303770 + L2 LINE L2 627 1140 -2174 235 272 32 56 chr5 155781933 155782058 -47303474 + L2 LINE L2 1460 1581 -1733 300 187 33 33 chr5 155782136 155782227 -47303305 + L2 LINE L2 2064 2154 -1160 952 301 130 16 chr5 155782270 155783094 -47302438 + L2 LINE L2 2353 3278 -35 333 0 0 0 chr5 155783096 155783133 -47302399 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2311 93 0 10 chr5 155784038 155784340 -47301192 + AluSx SINE Alu 3 301 -11 909 158 0 7 chr5 155788373 155788512 -47297020 + AluSg/x SINE Alu 138 275 -37 230 29 59 0 chr5 155788516 155788550 -47296982 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 209 159 159 0 chr5 155791061 155791130 -47294402 + L2 LINE L2 2010 2089 -1225 200 297 47 47 chr5 155791208 155791400 -47294132 + L2 LINE L2 2258 2449 -865 1007 233 156 29 chr5 155791552 155791930 -47293602 - MLT1F LTR MaLR -72 470 45 350 239 260 8 chr5 155791978 155792278 -47293254 + L2 LINE L2 2683 3049 -264 837 147 0 22 chr5 155792282 155792418 -47293114 + FLAM_C SINE Alu 1 133 0 1815 235 80 22 chr5 155793780 155794466 -47291066 + MER63C DNA MER1_type 1 768 -162 1312 247 69 59 chr5 155794486 155794963 -47290569 - L1ME1 LINE L1 -18 6148 5667 689 137 36 58 chr5 155794963 155795102 -47290430 - AluSq/x SINE Alu -175 137 2 1079 196 98 27 chr5 155795117 155795485 -47290047 + L1M4 LINE L1 4945 5338 -808 1003 122 36 0 chr5 155795486 155795625 -47289907 + AluSg/x SINE Alu 154 297 -13 3847 214 173 75 chr5 155795626 155796760 -47288772 - L1ME1 LINE L1 -1214 4932 3910 2255 83 4 4 chr5 155796760 155797038 -47288494 + AluSg SINE Alu 1 278 -32 284 0 28 0 chr5 155797038 155797074 -47288458 + (GAAAA)n Simple_repeat Simple_repeat 1 37 0 3847 214 173 75 chr5 155797074 155797313 -47288219 - L1ME1 LINE L1 -2236 3910 3696 1567 204 56 44 chr5 155797313 155797812 -47287720 + MLT1D LTR MaLR 1 505 0 3847 214 173 75 chr5 155797812 155798133 -47287399 - L1ME1 LINE L1 -2450 3696 3071 369 168 63 21 chr5 155798134 155798229 -47287303 + MER63C DNA MER1_type 780 878 -52 1853 155 17 7 chr5 155798666 155798956 -47286576 + AluJo SINE Alu 1 293 -19 261 167 93 0 chr5 155799365 155799419 -47286113 + L2 LINE L2 3255 3313 0 278 188 0 0 chr5 155801038 155801086 -47284446 + MIR SINE MIR 95 142 -66 257 224 52 95 chr5 155802140 155802256 -47283276 - MIR SINE MIR -126 136 26 246 269 213 9 chr5 155803019 155803127 -47282405 - L2 LINE L2 0 3272 3143 367 284 28 28 chr5 155803149 155803290 -47282242 + MIR SINE MIR 6 146 -116 759 247 29 16 chr5 155804104 155804446 -47281086 + MSTD LTR MaLR 1 396 0 1755 166 57 3 chr5 155804917 155805213 -47280319 + AluJb SINE Alu 1 312 0 239 261 109 34 chr5 155807867 155807986 -47277546 + L2 LINE L2 3144 3271 -1 883 203 6 0 chr5 155811053 155811216 -47274316 - MER45A DNA AcHobo 0 178 15 2310 112 3 0 chr5 155811846 155812141 -47273391 + AluSx SINE Alu 1 296 -16 209 119 0 24 chr5 155812179 155812221 -47273311 + (CAAAAA)n Simple_repeat Simple_repeat 5 45 0 207 88 29 0 chr5 155812468 155812502 -47273030 + (CA)n Simple_repeat Simple_repeat 2 36 0 1533 146 87 59 chr5 155812673 155812960 -47272572 + AluJb SINE Alu 1 295 -17 1019 189 151 7 chr5 155812988 155813273 -47272259 - L1MC4 LINE L1 -22 8020 7695 712 159 0 38 chr5 155813305 155813437 -47272095 - FLAM_C SINE Alu -10 133 7 3107 214 57 28 chr5 155813444 155813938 -47271594 - L1MC4 LINE L1 -332 7710 7179 1366 158 0 21 chr5 155813938 155814179 -47271353 + MER46A DNA MER2_type 1 236 0 3107 214 57 28 chr5 155814179 155814551 -47270981 - L1MC4 LINE L1 -863 7179 6819 257 314 17 42 chr5 155814555 155814673 -47270859 + MER5A DNA MER1_type 41 160 -23 400 344 117 49 chr5 155814726 155815374 -47270158 - L3 LINE CR1 -82 1495 804 552 337 73 49 chr5 155815541 155815798 -47269734 - L3 LINE CR1 -792 785 513 1771 123 3 111 chr5 155815798 155816139 -47269393 - AluSx SINE Alu -8 304 1 552 337 73 49 chr5 155816139 155816290 -47269242 - L3 LINE CR1 -1064 513 367 428 232 80 16 chr5 155816296 155816421 -47269111 + L1ME3A LINE L1 6009 6141 -29 189 0 0 0 chr5 155817337 155817358 -47268174 + (T)n Simple_repeat Simple_repeat 1 21 0 756 253 30 55 chr5 155817744 155817981 -47267551 + MIR SINE MIR 31 261 -1 182 288 17 17 chr5 155819429 155819488 -47266044 + L3b LINE CR1 1405 1463 -120 623 122 20 0 chr5 155820826 155820924 -47264608 + MER94 DNA DNA 1 100 -34 269 250 125 21 chr5 155821114 155821210 -47264322 + MIR SINE MIR 20 125 -137 533 174 20 0 chr5 155821304 155821402 -47264130 - MER94 DNA DNA -34 100 1 326 220 275 0 chr5 155821418 155821509 -47264023 + MIR SINE MIR 119 234 -28 693 232 25 9 chr5 155822070 155822237 -47263295 - MIR SINE MIR -45 217 54 1006 218 0 0 chr5 155822574 155822762 -47262770 + MER5A DNA MER1_type 1 188 -1 226 167 37 56 chr5 155823636 155823690 -47261842 - L1M2b LINE L1 -5649 1560 1508 227 293 66 95 chr5 155823836 155824140 -47261392 + L2 LINE L2 2951 3245 -27 1218 78 41 78 chr5 155826088 155826307 -47259225 + AluSq SINE Alu 89 299 -14 414 273 50 0 chr5 155826319 155826440 -47259092 - MLT1K LTR MaLR -340 248 122 467 67 13 27 chr5 155828520 155828595 -47256937 + L1PA5 LINE L1 6081 6154 0 28 29 0 0 chr5 155828700 155828735 -47256797 + AT_rich Low_complexity Low_complexity 1 35 0 1392 188 71 7 chr5 155828839 155829121 -47256411 - AluJb SINE Alu -12 300 1 811 151 7 7 chr5 155829123 155829262 -47256270 - AluJo SINE Alu -173 139 1 21 0 0 0 chr5 155829298 155829319 -47256213 + AT_rich Low_complexity Low_complexity 1 21 0 479 254 61 61 chr5 155830189 155830354 -47255178 - MIR SINE MIR -25 237 73 1087 258 70 11 chr5 155830913 155831358 -47254174 + MLT1F LTR MaLR 1 540 -2 186 257 10 129 chr5 155831632 155831688 -47253844 - MIR SINE MIR -15 247 207 2188 97 0 7 chr5 155831688 155831986 -47253546 - AluSx SINE Alu -10 302 7 186 257 10 129 chr5 155831986 155832030 -47253502 - MIR SINE MIR -55 207 159 * 278 139 0 0 chr5 155832029 155832072 -47253460 + L2 LINE L2 3271 3313 0 21 36 0 0 chr5 155832203 155832231 -47253301 + AT_rich Low_complexity Low_complexity 1 28 0 194 317 10 67 chr5 155832716 155832820 -47252712 + L3b LINE CR1 1350 1447 -136 944 174 0 30 chr5 155832846 155833013 -47252519 - FRAM SINE Alu 0 166 5 880 288 74 7 chr5 155833014 155833421 -47252111 + L2 LINE L2 2684 3132 -181 4197 173 76 6 chr5 155833438 155834278 -47251254 - L1MB8 LINE L1 -10 6168 5270 704 184 28 50 chr5 155834270 155834426 -47251106 - L1MB8 LINE L1 -825 5321 5163 * 195 69 0 0 chr5 155834426 155834455 -47251077 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 2197 77 3 0 chr5 155834455 155834740 -47250792 - AluSc SINE Alu -23 286 1 704 184 28 50 chr5 155834740 155834761 -47250771 - L1MB8 LINE L1 -981 5165 5147 359 225 62 0 chr5 155834810 155834890 -47250642 + L2 LINE L2 3182 3266 -6 1057 153 12 0 chr5 155834890 155835060 -47250472 - AluJb SINE Alu -21 291 120 232 154 0 0 chr5 155835546 155835585 -47249947 - L1M4 LINE L1 -417 5757 5719 1969 132 0 26 chr5 155836300 155836611 -47248921 + AluSx SINE Alu 1 303 -9 725 294 22 22 chr5 155837256 155837484 -47248048 + MIR SINE MIR 14 241 -21 2055 120 0 7 chr5 155838296 155838604 -47246928 + AluSx SINE Alu 5 310 -2 2337 75 0 0 chr5 155838604 155838909 -47246623 + AluY SINE Alu 1 305 -6 2124 112 0 34 chr5 155839713 155840036 -47245496 - AluSx SINE Alu 0 312 1 1456 140 48 12 chr5 155842437 155842766 -47242766 - AluJb SINE Alu 0 361 24 2006 113 14 3 chr5 155843218 155843510 -47242022 - AluSq SINE Alu -18 295 1 1168 168 10 0 chr5 155844051 155844248 -47241284 + AluJo SINE Alu 84 282 -30 970 102 0 7 chr5 155844644 155844781 -47240751 + AluSq/x SINE Alu 1 136 -176 254 224 0 13 chr5 155844911 155844987 -47240545 + GA-rich Low_complexity Low_complexity 4 78 0 1320 176 106 0 chr5 155845836 155846092 -47239440 - AluJb SINE Alu -16 296 14 1784 123 0 0 chr5 155846138 155846389 -47239143 - AluSq SINE Alu -58 255 5 305 288 213 31 chr5 155847697 155847857 -47237675 + MIR SINE MIR 20 208 -54 1468 99 18 9 chr5 155848031 155848253 -47237279 + L1PB1 LINE L1 5928 6151 0 33 0 0 0 chr5 155848259 155848292 -47237240 + AT_rich Low_complexity Low_complexity 1 33 0 976 242 129 62 chr5 155848365 155848815 -47236717 + MLT1J LTR MaLR 8 487 -24 2134 219 91 22 chr5 155848842 155849349 -47236183 + MLT1E LTR MaLR 52 593 0 853 283 133 21 chr5 155849419 155850027 -47235505 + L1ME LINE L1 4016 4691 -1455 * 5432 139 26 47 chr5 155850023 155850074 -47235458 - L1MA4 LINE L1 -4 6296 6245 3170 90 43 24 chr5 155850074 155850542 -47234990 - L1PA10 LINE L1 -8 6160 5684 5432 139 26 47 chr5 155850542 155850628 -47234904 - L1MA4 LINE L1 -55 6245 6159 2196 77 25 0 chr5 155850628 155850914 -47234618 - AluSp SINE Alu -16 297 5 5432 139 26 47 chr5 155850914 155851891 -47233641 - L1MA4 LINE L1 -141 6159 5163 2384 86 0 0 chr5 155851891 155852195 -47233337 - AluSc SINE Alu -5 304 1 5432 139 26 47 chr5 155852195 155852319 -47233213 - L1MA4 LINE L1 -1137 5163 5038 1639 185 11 0 chr5 155852319 155852605 -47232927 - AluJo SINE Alu -21 291 3 5432 139 26 47 chr5 155852605 155852950 -47232582 - L1MA4 LINE L1 -1262 5038 4755 1943 129 14 0 chr5 155852950 155853236 -47232296 - AluSx SINE Alu -22 290 1 5432 139 26 47 chr5 155853236 155853495 -47232037 - L1MA4 LINE L1 -1545 4755 4492 1821 188 49 54 chr5 155853496 155853547 -47231985 - MSTB LTR MaLR 0 426 376 1520 173 48 4 chr5 155853547 155853845 -47231687 - AluJb SINE Alu 0 310 1 1821 188 49 54 chr5 155853845 155854180 -47231352 - MSTB LTR MaLR -50 376 41 2238 107 7 0 chr5 155854225 155854534 -47230998 - AluSq SINE Alu -2 311 1 385 141 2 10 chr5 155854534 155854588 -47230944 - MSTB LTR MaLR -322 53 1 1235 145 45 48 chr5 155854595 155854749 -47230783 - L1MA4 LINE L1 -1658 4488 4334 1176 216 47 34 chr5 155854749 155855046 -47230486 + AluJo SINE Alu 1 301 -1 1235 145 45 48 chr5 155855046 155855160 -47230372 - L1MA4 LINE L1 -1812 4334 4221 692 189 49 0 chr5 155855161 155855283 -47230249 + FRAM SINE Alu 33 160 -16 2317 164 0 0 chr5 155855303 155855681 -47229851 - L1MA4 LINE L1 -1955 4191 3814 935 285 95 9 chr5 155855685 155856232 -47229300 + L1ME LINE L1 4679 5272 -874 22 0 0 0 chr5 155856271 155856293 -47229239 + AT_rich Low_complexity Low_complexity 1 22 0 789 263 40 67 chr5 155856471 155856847 -47228685 + L1ME LINE L1 5392 5757 -405 2111 93 3 0 chr5 155857005 155857295 -47228237 + AluSg SINE Alu 4 294 -16 1835 152 3 3 chr5 155857306 155857602 -47227930 + AluJb SINE Alu 1 296 -16 21 71 0 0 chr5 155857793 155857835 -47227697 + AT_rich Low_complexity Low_complexity 1 42 0 1460 272 54 10 chr5 155858021 155858429 -47227103 - L1M4b LINE L1 -5810 1049 624 1243 282 84 48 chr5 155858469 155858990 -47226542 - L1M4b LINE L1 -6308 551 12 825 157 0 0 chr5 155859557 155859678 -47225854 - FLAM_C SINE Alu -12 121 1 729 248 130 46 chr5 155859698 155860070 -47225462 - L1MEd LINE L1 -4867 1252 903 2501 158 48 57 chr5 155860071 155860634 -47224898 + L1MA8 LINE L1 5733 6290 -1 207 0 0 0 chr5 155860801 155860824 -47224708 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 44149 28 21 2 chr5 155860832 155866864 -47218668 - L1PA2 LINE L1 -3 6152 4 29 0 0 0 chr5 155866864 155866893 -47218639 + AT_rich Low_complexity Low_complexity 1 29 0 798 132 0 0 chr5 155866893 155867007 -47218525 - FLAM_C SINE Alu -15 118 5 597 269 78 18 chr5 155867011 155867230 -47218302 - L1MEd LINE L1 -5326 793 562 320 223 22 86 chr5 155867251 155867390 -47218142 - L1MC5 LINE L1 -48 7913 7784 1489 178 4 7 chr5 155867431 155867707 -47217825 - AluJo SINE Alu -12 300 26 691 132 0 0 chr5 155867707 155867798 -47217734 + 5S rRNA rRNA 2 92 -29 288 143 0 0 chr5 155867796 155867838 -47217694 - AluJo SINE Alu -260 42 1 * 312 189 70 43 chr5 155867839 155868024 -47217508 - L1MC5 LINE L1 -203 7758 7569 1236 183 75 25 chr5 155868069 155868348 -47217184 + AluJb SINE Alu 7 299 -13 810 212 46 59 chr5 155868348 155868654 -47216878 - L1MC5 LINE L1 -411 7550 7249 244 321 48 53 chr5 155868775 155868962 -47216570 - L1MEd LINE L1 -5819 300 115 302 301 24 0 chr5 155869025 155869108 -47216424 - L1MEd LINE L1 -5992 127 43 2035 93 4 0 chr5 155869491 155869761 -47215771 + AluSp SINE Alu 29 299 -14 443 300 47 32 chr5 155870515 155870705 -47214827 - L2 LINE L2 0 3313 3121 1335 255 86 29 chr5 155870792 155871318 -47214214 - MLT1L LTR MaLR -22 593 38 1023 187 6 0 chr5 155871319 155871485 -47214047 + FAM SINE Alu 1 167 -8 352 347 98 43 chr5 155871536 155872026 -47213506 - L2 LINE L2 -785 2529 2013 1726 168 7 17 chr5 155872227 155872525 -47213007 - AluJb SINE Alu -15 297 3 1558 192 20 3 chr5 155873691 155873988 -47211544 + AluJb SINE Alu 1 302 -10 348 291 79 54 chr5 155874160 155874363 -47211169 - MIR SINE MIR -34 228 21 388 169 99 0 chr5 155877289 155877360 -47208172 - MER3 DNA MER1_type -131 78 1 478 272 8 8 chr5 155877808 155877933 -47207599 + L2 LINE L2 3189 3313 0 1066 232 142 17 chr5 155880019 155880364 -47205168 + L2 LINE L2 2589 2976 -338 485 258 122 54 chr5 155880355 155880576 -47204956 + L2 LINE L2 3078 3313 0 * 1125 234 23 31 chr5 155880647 155880905 -47204627 + MIR SINE MIR 5 261 -1 505 294 95 52 chr5 155880903 155881155 -47204377 + L2 LINE L2 2707 2947 -366 * 1252 204 9 0 chr5 155881155 155881376 -47204156 - MER58A DNA MER1_type -1 223 1 505 294 95 52 chr5 155881376 155881653 -47203879 + L2 LINE L2 2947 3252 -61 2074 122 0 3 chr5 155881697 155882000 -47203532 + AluSx SINE Alu 1 302 -10 2172 83 0 0 chr5 155883595 155883873 -47201659 + AluSg SINE Alu 1 278 -32 468 0 0 0 chr5 155883873 155883925 -47201607 + (CAAAA)n Simple_repeat Simple_repeat 5 56 0 1259 243 16 86 chr5 155883925 155884378 -47201154 - L1MD2 LINE L1 -17 6342 5922 637 184 0 0 chr5 155884378 155884481 -47201051 + FLAM_C SINE Alu 8 110 -33 22 35 0 0 chr5 155884485 155884514 -47201018 + AT_rich Low_complexity Low_complexity 1 29 0 873 158 0 0 chr5 155884514 155884653 -47200879 + Tigger6a DNA MER2_type 362 500 -583 1479 195 124 37 chr5 155886057 155886405 -47199127 - MSTB LTR MaLR 0 426 49 21 71 0 0 chr5 155886405 155886447 -47199085 + AT_rich Low_complexity Low_complexity 1 42 0 1027 145 0 21 chr5 155886731 155886917 -47198615 - AluSg/x SINE Alu -10 300 119 182 345 0 0 chr5 155887357 155887412 -47198120 - MIR SINE MIR -61 147 93 * 510 257 52 7 chr5 155887409 155887545 -47197987 - MIR SINE MIR -29 233 92 482 278 16 0 chr5 155887552 155887678 -47197854 - MIR SINE MIR -43 219 92 * 510 257 52 7 chr5 155887675 155887811 -47197721 - MIR SINE MIR -29 233 92 482 239 26 8 chr5 155887818 155887935 -47197597 - MIR SINE MIR -43 219 101 504 236 55 8 chr5 155887941 155888068 -47197464 - MIR SINE MIR -29 233 101 634 250 73 16 chr5 155888074 155888266 -47197266 - MIR SINE MIR -29 233 31 261 208 28 14 chr5 155888291 155888363 -47197169 + GA-rich Low_complexity Low_complexity 4 76 0 576 290 301 3 chr5 155889383 155889759 -47195773 - L2 LINE L2 0 3313 2826 22 56 0 19 chr5 155890553 155890577 -47194955 + AT_rich Low_complexity Low_complexity 1 24 -29 1618 149 38 17 chr5 155890577 155890866 -47194666 + AluJo SINE Alu 1 295 -17 22 56 0 19 chr5 155890866 155890895 -47194637 + AT_rich Low_complexity Low_complexity 24 53 0 27 0 0 0 chr5 155891069 155891096 -47194436 + AT_rich Low_complexity Low_complexity 1 27 0 1228 271 22 30 chr5 155891927 155892289 -47193243 - LTR16C LTR ERVL 0 491 133 756 329 84 36 chr5 155892405 155893037 -47192495 - L2 LINE L2 -457 2857 2196 250 279 29 0 chr5 155893257 155893325 -47192207 + MIR SINE MIR 76 145 -117 744 218 54 75 chr5 155893483 155893805 -47191727 + L1MC4 LINE L1 7739 7995 0 226 224 0 0 chr5 155895259 155895308 -47190224 + (TG)n Simple_repeat Simple_repeat 1 49 0 211 238 48 0 chr5 155895904 155895967 -47189565 + GA-rich Low_complexity Low_complexity 1 66 0 1903 152 0 0 chr5 155895993 155896283 -47189249 + AluJb SINE Alu 9 298 -14 314 218 0 0 chr5 155896285 155896340 -47189192 - MER5B DNA MER1_type -123 55 1 185 164 15 104 chr5 155896445 155896512 -47189020 + L2 LINE L2 2683 2743 -571 204 338 25 12 chr5 155896790 155896870 -47188662 + MIR SINE MIR 111 191 -71 2603 19 0 16 chr5 155896885 155897199 -47188333 + AluY SINE Alu 1 309 -2 1545 158 7 39 chr5 155897235 155897545 -47187987 - AluJb SINE Alu -12 300 1 323 286 103 24 chr5 155897564 155897690 -47187842 - L2 LINE L2 0 3272 3137 271 331 149 0 chr5 155897764 155897885 -47187647 - L2 LINE L2 0 3272 3134 2149 97 7 26 chr5 155897950 155898260 -47187272 + AluSx SINE Alu 1 304 -8 248 0 0 30 chr5 155898260 155898293 -47187239 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 420 213 104 83 chr5 155898492 155898633 -47186899 - L2 LINE L2 -201 3071 2934 1459 154 52 66 chr5 155898633 155898938 -47186594 + AluJb SINE Alu 1 301 -11 420 213 104 83 chr5 155898938 155898988 -47186544 - L2 LINE L2 -338 2934 2887 2259 84 0 3 chr5 155898988 155899285 -47186247 + AluY SINE Alu 1 296 -15 420 213 104 83 chr5 155899285 155899332 -47186200 - L2 LINE L2 -385 2887 2827 2175 96 0 0 chr5 155899876 155900168 -47185364 - AluSc SINE Alu -17 292 1 209 308 119 32 chr5 155900198 155900383 -47185149 + L2 LINE L2 2620 2820 -494 * 1109 249 80 18 chr5 155900382 155900720 -47184812 + L2 LINE L2 2935 3293 -20 247 359 145 0 chr5 155900992 155901123 -47184409 + L2 LINE L2 3123 3272 0 261 172 0 0 chr5 155901757 155901821 -47183711 + (ATG)n Simple_repeat Simple_repeat 1 64 0 2001 135 0 6 chr5 155901869 155902180 -47183352 + AluSx SINE Alu 1 309 -3 253 341 164 0 chr5 155902230 155902444 -47183088 + MIR SINE MIR 4 252 -10 1625 125 78 25 chr5 155902498 155902779 -47182753 - AluSx SINE Alu -16 296 1 730 300 36 14 chr5 155902779 155902999 -47182533 - MIR SINE MIR -34 228 4 401 312 99 59 chr5 155903004 155903206 -47182326 + LTR16B LTR ERVL 3 212 -252 2054 126 13 62 chr5 155903213 155903380 -47182152 - L1MB3 LINE L1 -10 6173 5999 2066 95 3 14 chr5 155903380 155903693 -47181839 + AluSp SINE Alu 1 313 0 2054 126 13 62 chr5 155903693 155903748 -47181784 - L1MB3 LINE L1 -184 5999 5943 1492 122 0 4 chr5 155903748 155903977 -47181555 - AluSg/x SINE Alu 0 312 85 2054 126 13 62 chr5 155903977 155904143 -47181389 - L1MB3 LINE L1 -240 5943 5803 2171 94 3 3 chr5 155904143 155904441 -47181091 + AluSq SINE Alu 1 298 -15 252 119 24 0 chr5 155904470 155904512 -47181020 - L1MB3 LINE L1 -374 5806 5764 1093 244 12 4 chr5 155904514 155904772 -47180760 + LTR16B LTR ERVL 192 451 -13 2206 91 7 0 chr5 155904792 155905090 -47180442 - AluSx SINE Alu -12 300 1 2169 94 0 13 chr5 155905165 155905463 -47180069 - AluSx SINE Alu -18 294 1 21 36 0 0 chr5 155905474 155905502 -47180030 + AT_rich Low_complexity Low_complexity 1 28 0 271 230 40 0 chr5 155905642 155905716 -47179816 - L1ME4a LINE L1 -30 6091 6015 308 308 133 66 chr5 155905919 155906130 -47179402 - L2 LINE L2 -79 3193 2969 1730 172 11 0 chr5 155907280 155907565 -47177967 + AluJo SINE Alu 1 288 -24 2061 113 0 3 chr5 155909708 155910001 -47175531 - AluSg SINE Alu -18 292 1 1031 105 0 0 chr5 155910002 155910145 -47175387 - AluSq/x SINE Alu -169 143 1 219 187 13 27 chr5 155910274 155910349 -47175183 + CT-rich Low_complexity Low_complexity 2 75 0 587 158 114 9 chr5 155910655 155910769 -47174763 - LTR16C LTR ERVL 0 491 366 2055 125 3 3 chr5 155910833 155911144 -47174388 + AluSx SINE Alu 1 311 -1 354 170 21 85 chr5 155911189 155911283 -47174249 - LTR16C LTR ERVL -191 300 213 437 279 85 40 chr5 155911332 155911533 -47173999 - LTR16C LTR ERVL -281 210 1 265 150 33 17 chr5 155911561 155911621 -47173911 + MLT1K LTR MaLR 524 584 -4 438 222 14 111 chr5 155912076 155912220 -47173312 - L2 LINE L2 -10 3262 3133 1023 210 163 74 chr5 155912312 155912478 -47173054 + MLT1F LTR MaLR 24 174 -368 2294 85 0 0 chr5 155912478 155912771 -47172761 + AluY SINE Alu 1 293 -18 1023 210 163 74 chr5 155912771 155912943 -47172589 + MLT1F LTR MaLR 174 370 -172 368 252 23 61 chr5 155913025 155913156 -47172376 - LTR16C LTR ERVL -281 210 85 706 127 44 171 chr5 155913160 155913241 -47172291 + MLT1F LTR MaLR 389 479 -88 2145 119 3 0 chr5 155913241 155913553 -47171979 - AluSq SINE Alu 0 313 1 706 127 44 171 chr5 155913553 155913611 -47171921 + MLT1F LTR MaLR 479 497 -70 2279 82 3 0 chr5 155913611 155913904 -47171628 + AluSc SINE Alu 1 294 -15 706 127 44 171 chr5 155913904 155913968 -47171564 + MLT1F LTR MaLR 497 567 0 813 126 0 0 chr5 155915012 155915131 -47170401 - FLAM_C SINE Alu -3 140 22 1618 183 0 10 chr5 155915168 155915458 -47170074 - AluJb SINE Alu -7 305 19 2104 105 23 3 chr5 155915514 155915818 -47169714 + AluSx SINE Alu 1 310 -2 2240 232 33 17 chr5 155915818 155916320 -47169212 + MLT1G LTR MaLR 18 482 -60 914 133 0 0 chr5 155916322 155916457 -47169075 - AluJo SINE Alu -177 135 1 375 231 189 42 chr5 155916501 155916644 -47168888 - MIR SINE MIR -87 175 12 2059 118 0 13 chr5 155917671 155917986 -47167546 + AluSp SINE Alu 1 311 -2 565 230 115 70 chr5 155918247 155918447 -47167085 - MIR SINE MIR -6 256 48 1412 107 5 0 chr5 155918810 155919006 -47166526 + AluSq SINE Alu 1 197 -116 736 274 52 41 chr5 155919270 155919391 -47166141 + L2 LINE L2 2382 2500 -814 1988 160 0 26 chr5 155919391 155919704 -47165828 + AluJb SINE Alu 1 305 -7 736 274 52 41 chr5 155919704 155919852 -47165680 + L2 LINE L2 2500 2654 -660 306 0 0 0 chr5 155919852 155919886 -47165646 + (T)n Simple_repeat Simple_repeat 1 34 0 2294 111 0 16 chr5 155919904 155920038 -47165494 + AluSg SINE Alu 1 136 -174 2424 69 0 20 chr5 155920038 155920341 -47165191 + AluY SINE Alu 1 297 -14 2294 111 0 16 chr5 155920341 155920521 -47165011 + AluSg SINE Alu 136 310 0 253 267 0 0 chr5 155920563 155920623 -47164909 + L2 LINE L2 2631 2690 -624 63 14 0 0 chr5 155920638 155920708 -47164824 + AT_rich Low_complexity Low_complexity 1 70 0 515 196 27 103 chr5 155920711 155920807 -47164725 - MER3 DNA MER1_type -39 123 93 734 198 0 0 chr5 155920807 155920933 -47164599 + FLAM_A SINE Alu 5 130 -3 515 196 27 103 chr5 155920933 155921020 -47164512 - MER3 DNA MER1_type -69 93 1 1050 272 8 45 chr5 155921022 155921240 -47164292 + L2 LINE L2 2686 2889 -424 2160 133 0 3 chr5 155921240 155921542 -47163990 - AluSx SINE Alu -11 301 1 1050 272 8 45 chr5 155921542 155921693 -47163839 + L2 LINE L2 2889 3044 -269 276 120 0 0 chr5 155921744 155921794 -47163738 + (TC)n Simple_repeat Simple_repeat 1 50 0 1334 153 0 10 chr5 155921799 155922001 -47163531 - AluJo SINE Alu -112 200 1 703 283 25 5 chr5 155922005 155922203 -47163329 + L2 LINE L2 3112 3313 0 1901 111 8 8 chr5 155922504 155922766 -47162766 - AluSx SINE Alu -14 298 37 2472 103 0 0 chr5 155923030 155923341 -47162191 - AluSx SINE Alu -1 311 1 2343 102 0 9 chr5 155923399 155923714 -47161818 - AluSx SINE Alu 0 312 1 332 232 0 96 chr5 155923877 155923909 -47161623 + L2 LINE L2 3190 3223 -90 1861 169 7 7 chr5 155923909 155924216 -47161316 + AluJo SINE Alu 1 307 -5 332 232 0 96 chr5 155924216 155924308 -47161224 + L2 LINE L2 3223 3302 -11 742 181 16 0 chr5 155924918 155925045 -47160487 - AluJb SINE Alu -182 130 2 571 209 75 174 chr5 155925659 155925779 -47159753 - MIR SINE MIR 0 262 184 2241 116 0 0 chr5 155925779 155926064 -47159468 + AluSg SINE Alu 1 285 -25 571 209 75 174 chr5 155926064 155926225 -47159307 - MIR SINE MIR -78 184 9 1022 193 0 6 chr5 155926232 155926408 -47159124 + FAM SINE Alu 1 175 0 1643 148 107 0 chr5 155927191 155927508 -47158024 - L1MB7 LINE L1 -15 6169 5819 362 252 158 0 chr5 155927529 155927656 -47157876 - L1MCb LINE L1 -5854 191 45 2054 117 3 7 chr5 155927686 155927991 -47157541 - AluSx SINE Alu 0 304 1 653 160 56 0 chr5 155927997 155928122 -47157410 - L1M4 LINE L1 -1538 4608 4477 245 314 73 16 chr5 155929225 155929349 -47156183 - L2 LINE L2 -5 3267 3137 1901 167 0 7 chr5 155929349 155929648 -47155884 + AluJb SINE Alu 1 297 -15 1751 183 0 0 chr5 155929760 155930034 -47155498 + AluJb SINE Alu 7 280 -32 243 0 0 0 chr5 155930034 155930061 -47155471 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 387 0 0 0 chr5 155930172 155930215 -47155317 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1956 97 35 4 chr5 155930218 155930477 -47155055 - AluSx SINE Alu -43 269 3 237 281 37 62 chr5 155931434 155931566 -47153966 - MIR SINE MIR -67 141 62 340 218 23 0 chr5 155931889 155931976 -47153556 - L1M4 LINE L1 -1950 4196 4108 554 179 0 0 chr5 155932023 155932107 -47153425 - FRAM/FAM SINE Alu -93 83 1 1036 230 109 46 chr5 155932192 155932631 -47152901 + MLT1L LTR MaLR 149 615 0 1208 276 138 5 chr5 155932631 155933008 -47152524 + L2 LINE L2 2887 3313 0 445 148 0 0 chr5 155933724 155933785 -47151747 + AluJ/FLAM SINE Alu 2 62 -250 2223 126 7 3 chr5 155933786 155934095 -47151437 - AluSg SINE Alu 0 310 1 1054 246 92 9 chr5 155934127 155934630 -47150902 + L2 LINE L2 2539 3077 -236 1981 159 0 0 chr5 155934636 155934931 -47150601 + AluJb SINE Alu 5 299 -13 728 192 31 8 chr5 155934943 155935073 -47150459 + AluJo SINE Alu 3 135 -177 888 194 0 42 chr5 155935102 155935293 -47150239 + AluJo SINE Alu 117 299 -13 719 254 33 14 chr5 155935302 155935515 -47150017 + L2 LINE L2 3078 3294 -19 2421 95 0 0 chr5 155935521 155935826 -47149706 + AluY SINE Alu 1 305 -6 216 0 0 0 chr5 155935866 155935890 -47149642 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 377 250 62 0 chr5 155936562 155936658 -47148874 + MIR3 SINE MIR 63 164 -44 2014 143 0 44 chr5 155936661 155936976 -47148556 - AluJo SINE Alu -11 301 1 375 238 67 0 chr5 155937626 155937731 -47147801 + MIR SINE MIR 88 199 -63 1017 70 0 0 chr5 155937731 155937859 -47147673 - AluY SINE Alu -11 300 173 1901 161 3 3 chr5 155938435 155938773 -47146759 - AluJo SINE Alu 0 312 1 1950 171 0 16 chr5 155938959 155939275 -47146257 + AluJo SINE Alu 1 311 -1 181 236 65 81 chr5 155939296 155939419 -47146113 - L2 LINE L2 -307 3006 2886 2892 143 46 65 chr5 155939448 155940404 -47145128 + MER21A LTR ERV1 24 912 -19 1468 149 90 48 chr5 155940404 155940870 -47144662 + AluSx SINE Alu 1 478 0 763 167 0 0 chr5 155940948 155941062 -47144470 - AluJb SINE Alu -194 118 5 351 259 71 18 chr5 155941094 155941206 -47144326 - L2 LINE L2 -558 2756 2639 4625 135 29 49 chr5 155941264 155941376 -47144156 + L1MA5 LINE L1 4809 4922 -1378 1333 154 177 27 chr5 155941376 155941636 -47143896 + AluJb SINE Alu 1 299 -3 4625 135 29 49 chr5 155941636 155941701 -47143831 + L1MA5 LINE L1 4922 4987 -1313 733 208 0 0 chr5 155941701 155941831 -47143701 + AluJ SINE Alu 1 130 -172 4625 135 29 49 chr5 155941831 155942008 -47143524 + L1MA5 LINE L1 4987 5166 -1134 1912 138 54 43 chr5 155942008 155942377 -47143155 + THE1C LTR MaLR 1 373 -2 4625 135 29 49 chr5 155942377 155942728 -47142804 + L1MA5 LINE L1 5166 5523 -777 1899 158 7 0 chr5 155942728 155943035 -47142497 - AluSx SINE Alu 0 309 1 4625 135 29 49 chr5 155943035 155943690 -47141842 + L1MA5 LINE L1 5523 6132 -168 2014 136 3 3 chr5 155943758 155944053 -47141479 + AluSq SINE Alu 1 295 -18 952 146 6 76 chr5 155944061 155944232 -47141300 + AluJ SINE Alu 133 291 -21 924 159 0 0 chr5 155944232 155944408 -47141124 + L1MA5 LINE L1 6125 6300 0 2448 88 0 22 chr5 155944410 155944730 -47140802 + AluSq SINE Alu 1 313 0 2245 117 0 3 chr5 155944764 155945062 -47140470 + AluSx SINE Alu 2 298 -14 782 211 46 0 chr5 155945062 155945214 -47140318 + AluJb SINE Alu 134 292 -20 1201 213 49 14 chr5 155945242 155945529 -47140003 - MLT1C LTR MaLR 0 467 171 2057 98 3 28 chr5 155945549 155945834 -47139698 - AluY SINE Alu -33 278 1 1027 165 0 0 chr5 155945835 155945999 -47139533 - FRAM SINE Alu -8 168 5 471 95 0 95 chr5 155945999 155946083 -47139449 - MLT1C LTR MaLR -220 176 95 656 105 18 18 chr5 155946122 155946236 -47139296 - MLT1C LTR MaLR -351 116 3 1179 267 194 2 chr5 155946237 155946347 -47139185 - L2 LINE L2 -993 2321 2233 1798 166 0 52 chr5 155946347 155946509 -47139023 + AluJo SINE Alu 1 141 -171 2137 139 0 0 chr5 155946509 155946810 -47138722 - AluSx SINE Alu -6 306 6 1798 166 0 52 chr5 155946810 155946955 -47138577 + AluJo SINE Alu 141 292 -20 1179 267 194 2 chr5 155946955 155947304 -47138228 - L2 LINE L2 -1081 2233 1774 919 181 78 0 chr5 155947304 155947470 -47138062 + AluJb SINE Alu 134 312 0 268 328 62 23 chr5 155947475 155947603 -47137929 - L2 LINE L2 -1534 1780 1648 903 326 13 3 chr5 155947612 155947919 -47137613 - L2 LINE L2 -1772 1542 1233 561 268 37 63 chr5 155947996 155948186 -47137346 - MLT1K LTR MaLR -347 241 57 337 182 10 1 chr5 155948420 155948502 -47137030 + Alu SINE Alu 2 52 -256 450 253 253 21 chr5 155948595 155948880 -47136652 - MLT1I LTR MaLR 0 409 59 1955 162 0 0 chr5 155949021 155949311 -47136221 + AluJb SINE Alu 11 300 -12 43508 35 1 1 chr5 155949323 155955476 -47130056 + L1PA4 LINE L1 1 6155 0 298 330 70 20 chr5 155955551 155955751 -47129781 - L2 LINE L2 -213 3059 2850 1496 145 0 13 chr5 155955754 155955981 -47129551 - AluJb SINE Alu -5 307 84 1279 161 9 22 chr5 155956507 155956730 -47128802 + AluJo SINE Alu 85 304 -8 668 316 66 58 chr5 155957376 155957572 -47127960 - L2 LINE L2 0 3313 3111 2361 98 3 0 chr5 155957572 155957869 -47127663 + AluSp SINE Alu 1 298 -15 668 316 66 58 chr5 155957869 155958049 -47127483 - L2 LINE L2 -202 3111 2934 2219 123 0 13 chr5 155958151 155958467 -47127065 + AluJb SINE Alu 1 312 0 387 302 31 6 chr5 155958468 155958627 -47126905 - LTR33A LTR ERVL -28 495 333 1198 130 0 0 chr5 155958768 155958930 -47126602 + AluSx SINE Alu 1 162 -150 343 187 144 58 chr5 155959045 155959184 -47126348 + MIR SINE MIR 112 262 0 2000 221 65 106 chr5 155959498 155959941 -47125591 - MLT1G LTR MaLR -2 588 180 2311 97 7 0 chr5 155959941 155960239 -47125293 - AluSx SINE Alu -12 300 1 2000 221 65 106 chr5 155960239 155960411 -47125121 - MLT1G LTR MaLR -410 180 3 910 308 52 19 chr5 155960785 155961324 -47124208 + L1M4 LINE L1 2995 3551 -2595 2037 113 63 0 chr5 155961327 155961611 -47123921 - AluJb SINE Alu -10 302 1 501 246 60 71 chr5 155961615 155961735 -47123797 - MIR SINE MIR -74 188 69 1877 140 31 7 chr5 155961735 155962027 -47123505 - AluJb SINE Alu -13 299 1 501 246 60 71 chr5 155962027 155962089 -47123443 - MIR SINE MIR -193 69 8 1723 116 47 82 chr5 155962474 155962792 -47122740 + AluJo SINE Alu 1 307 -5 2004 100 62 71 chr5 155962872 155963018 -47122514 + MER1B DNA MER1_type 1 147 -2563 2304 99 0 10 chr5 155963018 155963320 -47122212 - AluSg SINE Alu 0 310 12 2004 100 62 71 chr5 155963320 155963513 -47122019 + MER1B DNA MER1_type 147 337 0 325 295 76 54 chr5 155963805 155964029 -47121503 + MLT1H LTR MaLR 105 333 -216 776 222 148 20 chr5 155964371 155964574 -47120958 + MIR SINE MIR 34 262 0 360 235 24 12 chr5 155965063 155965148 -47120384 + L2 LINE L2 3227 3312 -1 343 206 20 29 chr5 155965833 155965935 -47119597 - LTR67 LTR ERVL 0 557 457 814 157 8 15 chr5 155966045 155966348 -47119184 - FLAM_C SINE Alu 0 302 1 767 186 0 0 chr5 155966385 155966503 -47119029 + FLAM_C SINE Alu 1 118 -15 2009 133 27 0 chr5 155966529 155966823 -47118709 - AluSx SINE Alu -10 302 1 257 176 17 12 chr5 155966854 155966926 -47118606 - MLT1K LTR MaLR -342 246 120 540 139 0 0 chr5 155967263 155967342 -47118190 + AluSg/x SINE Alu 215 293 -16 1216 256 41 39 chr5 155967941 155968241 -47117291 + LTR33 LTR ERVL 27 330 -191 2264 125 0 6 chr5 155968241 155968553 -47116979 + AluSx SINE Alu 3 312 0 1216 256 41 39 chr5 155968553 155968737 -47116795 + LTR33 LTR ERVL 330 512 -9 385 242 211 0 chr5 155969673 155969768 -47115764 - L2 LINE L2 0 3313 3199 2094 98 7 7 chr5 155969798 155970084 -47115448 + AluSx SINE Alu 1 286 -26 477 0 0 0 chr5 155970084 155970137 -47115395 + (CAATA)n Simple_repeat Simple_repeat 2 54 0 614 292 88 5 chr5 155970145 155970388 -47115144 + L2 LINE L2 2784 3043 -270 360 228 118 47 chr5 155971301 155971428 -47114104 - L2 LINE L2 -3 3269 3134 1710 173 3 3 chr5 155971445 155971729 -47113803 - AluJb SINE Alu -5 307 24 1692 163 51 0 chr5 155973134 155973410 -47112122 + AluJo SINE Alu 1 290 -22 200 229 0 114 chr5 155973415 155973485 -47112047 + L2 LINE L2 3027 3088 -184 334 276 151 7 chr5 155973508 155973660 -47111872 + MIR SINE MIR 86 259 -3 286 351 105 0 chr5 155973696 155973810 -47111722 + L2 LINE L2 3125 3250 -22 689 325 37 12 chr5 155973852 155974095 -47111437 - MIR SINE MIR 0 262 14 301 309 41 10 chr5 155974170 155974267 -47111265 + L2 LINE L2 3173 3272 0 33 0 0 0 chr5 155975634 155975667 -47109865 + AT_rich Low_complexity Low_complexity 1 33 0 2337 93 0 6 chr5 155975668 155975979 -47109553 - AluSx SINE Alu -3 309 1 962 175 43 5 chr5 155975981 155976192 -47109340 - AluSg/x SINE Alu -2 310 92 23 0 0 0 chr5 155976289 155976312 -47109220 + GC_rich Low_complexity Low_complexity 1 23 0 977 163 19 0 chr5 155976415 155976575 -47108957 + MER69A DNA AcHobo 15 177 0 278 208 32 120 chr5 155976902 155977027 -47108505 - MIR SINE MIR -71 191 78 732 214 115 22 chr5 155977045 155977227 -47108305 - MIR SINE MIR -57 205 7 201 182 0 45 chr5 155977571 155977615 -47107917 - MIR SINE MIR -59 149 108 2231 128 0 0 chr5 155977639 155977951 -47107581 + AluSx SINE Alu 1 312 0 233 345 23 0 chr5 155977999 155978086 -47107446 - L2 LINE L2 -338 2976 2888 600 289 33 68 chr5 155978183 155978550 -47106982 + L2 LINE L2 2216 2569 -745 1088 274 63 62 chr5 155978690 155978764 -47106768 - L2 LINE L2 0 3313 3241 2031 138 7 0 chr5 155978764 155979060 -47106472 + AluSx SINE Alu 1 298 -14 1088 274 63 62 chr5 155979060 155979155 -47106377 - L2 LINE L2 -72 3241 3148 1723 145 129 30 chr5 155979155 155979458 -47106074 - MER1B DNA MER1_type 0 337 5 1088 274 63 62 chr5 155979458 155979539 -47105993 - L2 LINE L2 -165 3148 3069 1828 180 0 10 chr5 155979539 155979845 -47105687 - AluJo SINE Alu -9 303 1 1088 274 63 62 chr5 155979845 155980140 -47105392 - L2 LINE L2 -244 3069 2739 1361 126 35 39 chr5 155980144 155980375 -47105157 - L1PA15 LINE L1 0 6165 5936 284 319 96 15 chr5 155980509 155980644 -47104888 + L2 LINE L2 2686 2831 -483 2025 208 121 107 chr5 155980763 155981293 -47104239 - L2 LINE L2 -39 3274 2753 2447 61 3 0 chr5 155981293 155981587 -47103945 - AluY SINE Alu -16 295 1 2025 208 121 107 chr5 155981587 155981764 -47103768 - L2 LINE L2 -560 2753 2580 2322 86 3 10 chr5 155981764 155982066 -47103466 + AluSx SINE Alu 1 300 -12 2025 208 121 107 chr5 155982066 155982306 -47103226 - L2 LINE L2 -733 2580 2326 1410 189 27 43 chr5 155982306 155982607 -47102925 + AluJo SINE Alu 1 296 -16 2025 208 121 107 chr5 155982607 155982819 -47102713 - L2 LINE L2 -987 2326 2118 200 259 19 37 chr5 155982787 155982841 -47102691 - L3 LINE CR1 -945 632 580 * 1752 95 0 22 chr5 155982847 155982941 -47102591 - AluSx SINE Alu -85 227 132 2060 120 34 0 chr5 155982941 155983233 -47102299 - AluSq SINE Alu -11 302 1 1752 95 0 22 chr5 155983233 155983370 -47102162 - AluSx SINE Alu -180 132 1 1991 184 86 21 chr5 155983384 155983477 -47102055 - Charlie1b DNA MER1_type -2253 508 422 1634 163 7 27 chr5 155983477 155983778 -47101754 + AluJo SINE Alu 1 295 -17 1991 184 86 21 chr5 155983778 155984161 -47101371 - Charlie1b DNA MER1_type -2339 422 1 1002 250 54 11 chr5 155984161 155984437 -47101095 - L2 LINE L2 -1190 2124 1837 288 53 0 0 chr5 155984552 155984590 -47100942 + (TG)n Simple_repeat Simple_repeat 2 39 0 1645 172 3 7 chr5 155984591 155984876 -47100656 - AluJb SINE Alu -28 284 1 270 355 40 32 chr5 155984879 155985003 -47100529 + L2 LINE L2 3122 3246 -26 491 147 0 118 chr5 155985137 155985168 -47100364 + MER45A DNA AcHobo 40 73 -1508 2388 97 0 0 chr5 155985168 155985499 -47100033 + AluSc SINE Alu 1 309 0 491 147 0 118 chr5 155985499 155985569 -47099963 + MER45A DNA AcHobo 73 129 -49 2063 168 76 37 chr5 155985684 155985749 -47099783 - MSTA LTR MaLR 0 428 367 1892 113 106 0 chr5 155985749 155985999 -47099533 + AluSq SINE Alu 1 286 -27 180 0 0 0 chr5 155985999 155986019 -47099513 + (CA)n Simple_repeat Simple_repeat 1 20 0 1892 113 106 0 chr5 155986019 155986051 -47099481 + AluSq SINE Alu 286 313 0 2063 168 76 37 chr5 155986051 155986217 -47099315 - MSTA LTR MaLR -61 367 209 1883 130 0 46 chr5 155986217 155986375 -47099157 - AluJb SINE Alu -19 293 154 2021 120 20 3 chr5 155986375 155986667 -47098865 - AluSq SINE Alu -16 297 1 1883 130 0 46 chr5 155986667 155986815 -47098717 - AluJb SINE Alu -158 154 1 2063 168 76 37 chr5 155986815 155986992 -47098540 - MSTA LTR MaLR -219 209 3 223 259 12 47 chr5 155987004 155987089 -47098443 - L2 LINE L2 -276 2996 2915 1813 145 24 7 chr5 155987131 155987421 -47098111 - AluJb SINE Alu -13 299 5 267 330 161 0 chr5 155987529 155987647 -47097885 - L2 LINE L2 -3 3269 3133 214 57 75 57 chr5 155987851 155987904 -47097628 + T-rich Low_complexity Low_complexity 2 55 0 918 125 29 2 chr5 155988108 155988349 -47097183 + AluJo SINE Alu 7 296 -16 217 256 64 13 chr5 155988363 155988441 -47097091 + MIR3 SINE MIR 116 197 -11 197 299 206 0 chr5 155988444 155988551 -47096981 + MIR3 SINE MIR 39 167 -41 1823 25 8 50 chr5 155989114 155989257 -47096275 - L1P2 LINE L1 -529 5625 5494 2605 32 3 19 chr5 155989257 155989568 -47095964 - AluY SINE Alu -5 306 1 1823 25 8 50 chr5 155989568 155989663 -47095869 - L1P2 LINE L1 -660 5494 5397 2356 152 6 0 chr5 155990634 155990995 -47094537 + MER47A DNA MER2_type 4 366 0 5321 216 41 52 chr5 155991462 155993287 -47092245 - L1MC/D LINE L1 -743 5403 3781 795 133 16 16 chr5 155993289 155993417 -47092115 - FRAM SINE Alu -2 174 47 549 315 60 9 chr5 155993656 155993872 -47091660 - MIR SINE MIR -30 232 6 293 333 126 15 chr5 155994263 155994461 -47091071 - L3 LINE CR1 -254 1323 1104 389 259 98 85 chr5 155994464 155994688 -47090844 - L3 LINE CR1 -260 1317 1091 307 376 40 0 chr5 155995395 155995520 -47090012 - L2 LINE L2 0 3272 3143 2000 142 13 13 chr5 155995546 155995864 -47089668 + MER44D DNA MER2_type 21 608 -1 240 35 0 0 chr5 155996155 155996184 -47089348 + (TG)n Simple_repeat Simple_repeat 1 29 0 267 173 39 0 chr5 155996222 155996274 -47089258 - MER65B LTR ERV1 -477 54 1 3268 174 58 45 chr5 155996274 155997294 -47088238 - L1M2 LINE L1 -646 5645 4614 * 4804 173 19 10 chr5 155997284 155998177 -47087355 + L1 LINE L1 3329 4229 -1917 1690 133 37 0 chr5 155998177 155998448 -47087084 - MER2 DNA MER2_type 0 345 65 365 250 90 0 chr5 155998555 155998655 -47086877 - MIR SINE MIR -147 115 7 23 68 0 0 chr5 155999020 155999064 -47086468 + AT_rich Low_complexity Low_complexity 1 44 0 293 353 64 5 chr5 156001670 156001857 -47083675 + MIR3 SINE MIR 8 205 -3 195 42 0 0 chr5 156002078 156002102 -47083430 + (A)n Simple_repeat Simple_repeat 1 24 0 378 0 0 0 chr5 156002582 156002624 -47082908 + (TG)n Simple_repeat Simple_repeat 1 42 0 1575 107 4 21 chr5 156003020 156003253 -47082279 + THE1C LTR MaLR 147 375 0 1270 186 82 25 chr5 156003334 156003614 -47081918 + AluJb SINE Alu 1 296 -16 27 49 0 0 chr5 156003945 156003986 -47081546 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr5 156004952 156004974 -47080558 + AT_rich Low_complexity Low_complexity 1 22 0 354 185 24 152 chr5 156005397 156005608 -47079924 - L1 LINE L1 -771 5375 5192 233 224 0 0 chr5 156005976 156006025 -47079507 + (TATG)n Simple_repeat Simple_repeat 3 51 0 24 0 0 0 chr5 156006157 156006181 -47079351 + AT_rich Low_complexity Low_complexity 1 24 0 1364 154 8 49 chr5 156006653 156006899 -47078633 + MER46A DNA MER2_type 1 236 0 368 118 0 0 chr5 156008092 156008143 -47077389 + 5S rRNA rRNA 1 51 -70 2290 101 0 26 chr5 156008435 156008742 -47076790 + AluSx SINE Alu 1 299 -13 219 69 0 0 chr5 156008968 156008997 -47076535 + (T)n Simple_repeat Simple_repeat 1 29 0 1029 175 51 0 chr5 156009672 156009849 -47075683 + MSTB LTR MaLR 241 426 0 1308 194 98 22 chr5 156009945 156010260 -47075272 + MER2 DNA MER2_type 7 345 0 1661 195 30 0 chr5 156010384 156010687 -47074845 + AluJo SINE Alu 1 312 0 263 228 0 18 chr5 156010750 156010807 -47074725 + GA-rich Low_complexity Low_complexity 4 59 0 309 289 89 63 chr5 156010953 156011143 -47074389 - MIR SINE MIR -11 251 57 483 220 230 10 chr5 156011508 156011708 -47073824 + L1ME1 LINE L1 5846 6089 -77 13441 138 31 4 chr5 156011708 156013833 -47071699 + Tigger1 DNA MER2_type 1 2183 -235 24 0 0 0 chr5 156014140 156014164 -47071368 + AT_rich Low_complexity Low_complexity 1 24 0 2465 74 0 0 chr5 156014954 156015265 -47070267 + AluY SINE Alu 1 311 0 340 138 28 18 chr5 156015324 156015433 -47070099 + (TA)n Simple_repeat Simple_repeat 1 110 0 576 241 206 5 chr5 156015487 156015686 -47069846 - MIR SINE MIR -19 243 5 2579 114 75 15 chr5 156016112 156016514 -47069018 - MLT2A1 LTR ERVL -18 426 1 25 0 0 0 chr5 156017010 156017035 -47068497 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 156017141 156017174 -47068358 + AT_rich Low_complexity Low_complexity 1 33 0 881 241 15 26 chr5 156017194 156017464 -47068068 - L1MB8 LINE L1 -1 6177 5911 23 33 0 0 chr5 156017710 156017740 -47067792 + AT_rich Low_complexity Low_complexity 1 30 0 192 200 0 0 chr5 156017742 156017792 -47067740 + A-rich Low_complexity Low_complexity 4 53 0 727 253 16 113 chr5 156018683 156019133 -47066399 - L1MEc LINE L1 -4630 1766 1361 332 254 117 108 chr5 156019274 156019299 -47066233 + MLT1H LTR MaLR 1 24 -525 579 90 0 0 chr5 156019299 156019377 -47066155 + L1PA11 LINE L1 6096 6173 -1 332 254 117 108 chr5 156019377 156019658 -47065874 + MLT1H LTR MaLR 24 343 -206 242 244 110 0 chr5 156019826 156019908 -47065624 + MIR SINE MIR 171 261 -1 3098 134 26 0 chr5 156019985 156020523 -47065009 - L1MC/D LINE L1 -594 5739 5188 * 4529 64 5 42 chr5 156020519 156021144 -47064388 - L1PA7 LINE L1 -1 6153 5552 6541 60 5 28 chr5 156020526 156021723 -47063809 - L1PA7 LINE L1 -8 6146 4980 2199 116 0 0 chr5 156022392 156022685 -47062847 - AluSg SINE Alu -17 293 1 2137 99 3 3 chr5 156022877 156023190 -47062342 - AluSg SINE Alu 0 313 1 23 0 0 0 chr5 156023389 156023412 -47062120 + AT_rich Low_complexity Low_complexity 1 23 0 2124 73 13 73 chr5 156024369 156024684 -47060848 + AluY SINE Alu 1 296 -15 23 33 0 0 chr5 156025266 156025296 -47060236 + AT_rich Low_complexity Low_complexity 1 30 0 267 152 0 0 chr5 156025764 156025810 -47059722 + (TA)n Simple_repeat Simple_repeat 2 47 0 2774 178 45 45 chr5 156025827 156026462 -47059070 + MER66A-int LTR ERV1 1884 4441 -2235 511 231 9 22 chr5 156026462 156026585 -47058947 + MER4D LTR ERV1 35 160 -580 1838 129 45 92 chr5 156026586 156026989 -47058543 + MER66A-int LTR ERV1 4558 4941 -1735 1827 134 36 0 chr5 156026978 156027255 -47058277 + MER66A-int LTR ERV1 6390 6676 0 * 1335 203 132 33 chr5 156027334 156027773 -47057759 + MER66A LTR ERV1 97 478 0 2199 243 54 12 chr5 156027773 156028332 -47057200 + MLT1E3 LTR MaLR 43 624 0 33 0 0 0 chr5 156030476 156030509 -47055023 + AT_rich Low_complexity Low_complexity 1 33 0 239 333 72 22 chr5 156030837 156030975 -47054557 - MIR SINE MIR -101 161 17 227 164 3 0 chr5 156031055 156031099 -47054433 - MIR SINE MIR -63 145 107 377 234 189 11 chr5 156031393 156031568 -47053964 + HAL1 LINE L1 1481 1686 -821 307 250 145 57 chr5 156032538 156032662 -47052870 + Charlie2 DNA MER1_type 54 188 -2674 1304 236 158 38 chr5 156032873 156033538 -47051994 + Charlie2 DNA MER1_type 2012 2756 -106 2499 70 0 0 chr5 156034109 156034407 -47051125 - AluSx SINE Alu -13 299 2 485 200 44 94 chr5 156036297 156036477 -47049055 - FAM SINE Alu -4 171 1 1260 252 40 3 chr5 156037160 156037489 -47048043 + MER58B DNA MER1_type 1 341 0 6018 130 37 10 chr5 156037583 156038863 -47046669 - L1MA8 LINE L1 -6 6285 4985 629 352 58 60 chr5 156039416 156040036 -47045496 - L3 LINE CR1 -15 1562 944 348 242 13 34 chr5 156041193 156041342 -47044190 - Charlie7 DNA MER1_type 0 2612 2467 811 234 22 16 chr5 156041642 156041826 -47043706 - MIR SINE MIR -56 206 22 278 309 125 15 chr5 156041973 156042109 -47043423 - MIR3 SINE MIR -1 207 57 470 355 10 5 chr5 156042139 156042339 -47043193 - MIR SINE MIR -15 247 47 213 39 0 0 chr5 156042862 156042888 -47042644 + (CA)n Simple_repeat Simple_repeat 2 27 0 276 30 0 0 chr5 156043303 156043336 -47042196 + (TG)n Simple_repeat Simple_repeat 2 34 0 875 323 154 19 chr5 156043751 156044401 -47041131 + L2 LINE L2 1484 2221 -1093 10076 134 17 24 chr5 156044405 156046078 -47039454 + Tigger1 DNA MER2_type 1 1661 -757 769 150 0 0 chr5 156046178 156046298 -47039234 - FLAM_C SINE Alu -23 120 1 9105 177 120 52 chr5 156046300 156049300 -47036232 - L1MCa LINE L1 -3215 3211 23 271 331 87 27 chr5 156049306 156049490 -47036042 + L2 LINE L2 2654 2848 -466 1736 148 133 18 chr5 156049894 156050278 -47035254 + MSTA LTR MaLR 1 428 0 2244 85 0 10 chr5 156050820 156051113 -47034419 + AluSc SINE Alu 3 292 -17 1687 197 59 92 chr5 156051479 156052052 -47033480 + MLT2B3 LTR ERVL 1 554 0 453 36 0 0 chr5 156052293 156052348 -47033184 + (TATG)n Simple_repeat Simple_repeat 4 58 0 21 0 0 0 chr5 156053903 156053924 -47031608 + AT_rich Low_complexity Low_complexity 1 21 0 1270 206 39 58 chr5 156054016 156054326 -47031206 + AluJo SINE Alu 3 306 -6 232 283 85 19 chr5 156054602 156054708 -47030824 - L1ME LINE L1 -468 5653 5541 327 227 45 34 chr5 156055468 156055556 -47029976 + MIR3 SINE MIR 111 199 -9 1566 156 54 32 chr5 156055954 156056269 -47029263 - Tigger2 DNA MER2_type 0 2718 2397 1475 107 84 4 chr5 156056273 156056534 -47028998 - Tigger2 DNA MER2_type -2436 282 1 797 245 5 16 chr5 156059273 156059465 -47026067 + MER3 DNA MER1_type 19 208 -1 410 254 45 66 chr5 156059534 156059594 -47025938 + L1M4 LINE L1 5005 5065 -1081 2098 138 0 0 chr5 156059594 156059891 -47025641 + AluSx SINE Alu 9 305 -7 410 254 45 66 chr5 156059891 156060165 -47025367 + L1M4 LINE L1 5065 5332 -814 212 213 13 40 chr5 156060243 156060318 -47025214 + GA-rich Low_complexity Low_complexity 2 74 0 1863 127 62 3 chr5 156061812 156062104 -47023428 + AluJb SINE Alu 1 309 -3 242 211 77 0 chr5 156062702 156062754 -47022778 - MER20 DNA MER1_type 0 219 164 27 62 0 0 chr5 156063714 156063762 -47021770 + AT_rich Low_complexity Low_complexity 1 48 0 2034 142 0 7 chr5 156063901 156064196 -47021336 - AluJb SINE Alu -16 296 4 26799 34 3 3 chr5 156064671 156067972 -47017560 - L1P LINE L1 -854 5292 1990 319 318 45 8 chr5 156067988 156068120 -47017412 + L1MEc LINE L1 1440 1576 -4820 640 299 18 23 chr5 156068153 156068370 -47017162 - MIR SINE MIR -2 260 45 254 300 83 33 chr5 156068496 156068616 -47016916 - L2 LINE L2 -6 3307 3182 197 311 87 19 chr5 156068615 156068718 -47016814 + MIR SINE MIR 138 247 -15 * 286 362 10 55 chr5 156068782 156068981 -47016551 - L2 LINE L2 -179 3093 2904 369 314 200 16 chr5 156069204 156069449 -47016083 - L2 LINE L2 -798 2516 2227 4110 147 42 32 chr5 156069455 156070309 -47015223 - Tigger1 DNA MER2_type -3 2415 1485 3864 134 59 30 chr5 156072046 156072824 -47012708 + L1MA8 LINE L1 5479 6279 -12 546 255 105 59 chr5 156072880 156073166 -47012366 - LTR33 LTR ERVL -70 451 153 1081 149 24 0 chr5 156073170 156073338 -47012194 + FRAM SINE Alu 1 170 -6 1392 199 101 21 chr5 156073498 156073874 -47011658 - MER21B LTR ERV1 -11 852 447 1120 201 112 8 chr5 156073871 156074120 -47011412 - MER21B LTR ERV1 -588 275 1 * 2942 220 19 21 chr5 156074508 156075308 -47010224 - L1M4 LINE L1 -1027 5119 4322 1626 133 27 104 chr5 156075308 156075645 -47009887 + AluJb SINE Alu 1 311 -1 23 33 0 0 chr5 156076880 156076910 -47008622 + AT_rich Low_complexity Low_complexity 1 30 0 187 328 170 35 chr5 156077107 156077195 -47008337 - MIR SINE MIR 0 262 187 1098 197 46 65 chr5 156077195 156077546 -47007986 + MER2 DNA MER2_type 1 344 0 187 328 170 35 chr5 156077546 156077686 -47007846 - MIR SINE MIR -75 187 3 419 267 107 32 chr5 156077917 156078104 -47007428 + MER63A DNA MER1_type 10 210 0 2178 167 114 21 chr5 156078281 156078657 -47006875 + L1MD2 LINE L1 5174 5643 -716 1272 231 93 50 chr5 156078657 156079141 -47006391 + MLT1D LTR MaLR 1 505 0 2178 167 114 21 chr5 156079141 156079338 -47006194 + L1MD2 LINE L1 5643 5820 -539 689 99 0 0 chr5 156079346 156079437 -47006095 + AluS SINE Alu 1 91 -222 1380 142 9 121 chr5 156079437 156079769 -47005763 + AluSx SINE Alu 1 295 -7 350 227 36 36 chr5 156079773 156079883 -47005649 + L1MD2 LINE L1 5825 5934 -425 937 171 0 0 chr5 156079901 156080047 -47005485 - FRAM SINE Alu -30 146 1 923 239 70 58 chr5 156080051 156080465 -47005067 + L1MD2 LINE L1 5928 6346 -13 302 214 179 7 chr5 156080536 156080681 -47004851 + Charlie7 DNA MER1_type 2443 2612 0 1867 166 0 14 chr5 156080991 156081287 -47004245 - AluJb SINE Alu -20 292 1 608 81 0 0 chr5 156083259 156083345 -47002187 - Alu SINE Alu -6 306 221 314 306 88 36 chr5 156083581 156083774 -47001758 + MIR SINE MIR 6 208 -54 198 247 55 14 chr5 156083883 156083956 -47001576 + MIR SINE MIR 135 210 -52 2865 6 0 0 chr5 156084334 156084645 -47000887 + AluYa5 SINE Alu 1 311 0 1736 179 30 0 chr5 156085078 156085198 -47000334 + AluJb SINE Alu 1 116 -196 372 43 0 0 chr5 156085198 156085244 -47000288 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 1736 179 30 0 chr5 156085244 156085425 -47000107 + AluJb SINE Alu 116 311 -1 481 264 130 54 chr5 156085815 156086042 -46999490 - MIR SINE MIR 0 262 15 368 258 119 19 chr5 156086042 156086201 -46999331 - MER5B DNA MER1_type -3 175 1 481 264 130 54 chr5 156086201 156086212 -46999320 - MIR SINE MIR -247 15 6 250 204 56 0 chr5 156086664 156086718 -46998814 - L2 LINE L2 -6 3266 3210 249 325 38 64 chr5 156087055 156087212 -46998320 - MIR SINE MIR -86 176 24 209 270 32 0 chr5 156087416 156087479 -46998053 - MIR SINE MIR -112 96 32 31 0 0 0 chr5 156087527 156087558 -46997974 + AT_rich Low_complexity Low_complexity 1 31 0 1525 184 39 14 chr5 156087561 156087844 -46997688 - AluJo SINE Alu -22 290 1 2597 59 0 0 chr5 156087890 156088196 -46997336 + AluY SINE Alu 1 306 -5 472 173 0 3 chr5 156088233 156088321 -46997211 + MER58 DNA MER1_type 256 2420 0 21 0 0 0 chr5 156088398 156088419 -46997113 + AT_rich Low_complexity Low_complexity 1 21 0 2014 153 0 0 chr5 156088930 156089237 -46996295 - AluSx SINE Alu -5 307 1 1433 183 47 25 chr5 156089511 156089630 -46995902 + AluSx SINE Alu 1 116 -196 200 33 0 33 chr5 156089630 156089660 -46995872 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1433 183 47 25 chr5 156089660 156089814 -46995718 + AluSx SINE Alu 116 280 -32 342 0 0 0 chr5 156089833 156089871 -46995661 + (TAAG)n Simple_repeat Simple_repeat 1 38 0 1065 148 22 0 chr5 156090869 156091051 -46994481 + L1PB4 LINE L1 5958 6143 -13 2287 72 3 63 chr5 156091669 156091987 -46993545 + AluSc SINE Alu 1 299 -10 22 0 0 0 chr5 156092672 156092694 -46992838 + AT_rich Low_complexity Low_complexity 1 22 0 2312 207 53 14 chr5 156092782 156093348 -46992184 + MER90 LTR ERV1 24 611 -3 601 341 38 25 chr5 156093407 156093850 -46991682 - L1MC/D LINE L1 -2035 5773 5325 332 319 64 47 chr5 156093865 156094100 -46991432 - L1MC/D LINE L1 -848 5298 5060 1307 166 43 8 chr5 156094100 156094335 -46991197 + AluJb SINE Alu 44 286 -26 507 353 144 5 chr5 156094341 156094964 -46990568 - L1MC/D LINE L1 -1047 5099 4383 298 238 76 49 chr5 156095284 156095507 -46990025 - L1MC/D LINE L1 -2113 4033 3805 2343 101 0 0 chr5 156095528 156095835 -46989697 + AluSg SINE Alu 1 307 -3 224 237 274 30 chr5 156097457 156097592 -46987940 - L2 LINE L2 -22 3291 3124 761 261 36 5 chr5 156097925 156098120 -46987412 - MIR SINE MIR -25 237 37 461 263 84 50 chr5 156098143 156098322 -46987210 - MIR SINE MIR 0 262 78 2001 117 50 10 chr5 156099399 156099699 -46985833 + AluSx SINE Alu 1 312 0 4539 128 48 48 chr5 156100410 156101341 -46984191 - Tigger3b DNA MER2_type -300 931 1 1972 109 101 23 chr5 156101804 156102152 -46983380 + THE1C LTR MaLR 1 375 0 245 325 25 0 chr5 156102604 156102684 -46982848 - L2 LINE L2 -5 3267 3186 24 32 0 0 chr5 156102750 156102781 -46982751 + AT_rich Low_complexity Low_complexity 1 31 0 880 287 72 14 chr5 156103132 156103550 -46981982 + L1MC4a LINE L1 5518 5959 -1849 353 114 67 0 chr5 156103550 156103655 -46981877 + (TA)n Simple_repeat Simple_repeat 2 113 0 26 0 0 0 chr5 156104050 156104076 -46981456 + AT_rich Low_complexity Low_complexity 1 26 0 183 284 49 37 chr5 156104830 156104911 -46980621 - MIR SINE MIR -117 145 64 677 170 85 46 chr5 156105338 156105491 -46980041 - MER20 DNA MER1_type 0 219 61 1505 173 4 0 chr5 156105757 156106011 -46979521 + AluJo SINE Alu 34 288 -24 2994 155 60 89 chr5 156107114 156108241 -46977291 + MER52C LTR ERV1 16 1278 0 1943 118 52 0 chr5 156109905 156110177 -46975355 + AluSx SINE Alu 1 286 -26 237 33 0 0 chr5 156110190 156110220 -46975312 + (GAA)n Simple_repeat Simple_repeat 2 31 0 497 326 37 16 chr5 156111033 156111275 -46974257 + MIR SINE MIR 16 262 0 506 206 46 15 chr5 156112550 156112681 -46972851 - MER58A DNA MER1_type -45 179 45 5578 174 151 36 chr5 156113820 156115292 -46970240 + MER52A LTR ERV1 1 1749 -6 225 256 49 24 chr5 156115704 156115786 -46969746 - MIR3 SINE MIR -12 196 113 * 443 301 72 18 chr5 156115783 156115949 -46969583 - MIR3 SINE MIR -15 193 19 481 237 308 32 chr5 156116063 156116342 -46969190 - L2 LINE L2 -95 3218 2863 1818 139 7 45 chr5 156116580 156116747 -46968785 - AluJo SINE Alu -15 297 146 2192 119 3 0 chr5 156116747 156117049 -46968483 - AluSx SINE Alu -9 303 1 1818 139 7 45 chr5 156117049 156117190 -46968342 - AluJo SINE Alu -166 146 1 22 0 0 0 chr5 156117197 156117219 -46968313 + AT_rich Low_complexity Low_complexity 1 22 0 428 250 107 0 chr5 156117219 156117359 -46968173 + Charlie8 DNA MER1_type 53 207 -2210 2222 57 43 4 chr5 156117494 156117775 -46967757 - AluY SINE Alu -19 292 1 329 184 77 124 chr5 156117783 156117826 -46967706 + L2 LINE L2 2890 2933 -339 1627 152 52 61 chr5 156117826 156118136 -46967396 - AluJb SINE Alu -5 307 1 329 184 77 124 chr5 156118136 156118326 -46967206 + L2 LINE L2 2933 3112 -160 242 310 139 56 chr5 156118400 156118500 -46967032 + L2 LINE L2 3003 3093 -220 2226 110 6 25 chr5 156118500 156118817 -46966715 - AluSx SINE Alu -1 311 1 242 310 139 56 chr5 156118817 156119003 -46966529 + L2 LINE L2 3093 3313 0 319 294 103 24 chr5 156119078 156119204 -46966328 + L2 LINE L2 3137 3272 0 1602 160 13 36 chr5 156119223 156119530 -46966002 + AluJb SINE Alu 1 300 -12 2684 35 0 13 chr5 156119569 156119884 -46965648 - AluY SINE Alu 0 311 1 329 184 77 124 chr5 156119891 156119934 -46965598 + L2 LINE L2 2890 2933 -339 1581 153 55 62 chr5 156119934 156120242 -46965290 - AluJb SINE Alu -6 306 1 329 184 77 124 chr5 156120242 156120432 -46965100 + L2 LINE L2 2933 3112 -160 303 279 19 56 chr5 156120532 156120606 -46964926 + L2 LINE L2 2827 2902 -411 2069 142 0 3 chr5 156120606 156120916 -46964616 - AluSx SINE Alu -3 309 1 303 279 19 56 chr5 156120916 156121002 -46964530 + L2 LINE L2 2902 2981 -332 792 330 29 14 chr5 156121120 156121560 -46963972 + L2 LINE L2 1237 1780 -1534 900 181 78 0 chr5 156121565 156121731 -46963801 - AluJb SINE Alu 0 312 134 756 255 171 28 chr5 156121731 156122088 -46963444 + L2 LINE L2 1774 2181 -1133 886 190 0 0 chr5 156122092 156122234 -46963298 - AluSg/x SINE Alu -20 290 149 495 169 0 0 chr5 156122234 156122311 -46963221 + AluS SINE Alu 2 78 -235 622 77 58 0 chr5 156122381 156122485 -46963047 + AluSp/q SINE Alu 200 309 -4 215 281 101 0 chr5 156124007 156124096 -46961436 - L2 LINE L2 -215 3057 2960 365 236 68 43 chr5 156124637 156124798 -46960734 + MIR3 SINE MIR 3 167 -41 2174 107 0 25 chr5 156125576 156125893 -46959639 + AluSq SINE Alu 1 309 -4 334 203 0 0 chr5 156126095 156126154 -46959378 - AluJ/FLAM SINE Alu -242 60 2 2173 112 3 0 chr5 156126205 156126499 -46959033 - AluSg SINE Alu -15 295 1 2004 209 54 86 chr5 156126500 156126994 -46958538 + L1M4 LINE L1 3619 4127 -2019 2167 117 0 7 chr5 156126994 156127285 -46958247 + AluSq SINE Alu 3 291 -22 2004 209 54 86 chr5 156127285 156127388 -46958144 + L1M4 LINE L1 4127 4232 -1914 2148 132 3 0 chr5 156127388 156127692 -46957840 - AluSq SINE Alu -7 306 2 2004 209 54 86 chr5 156127692 156127910 -46957622 + L1M4 LINE L1 4232 4409 -1737 209 185 0 37 chr5 156128200 156128254 -46957278 + A-rich Low_complexity Low_complexity 2 53 0 2012 134 7 3 chr5 156128562 156128854 -46956678 - AluSx SINE Alu -19 293 1 308 226 37 18 chr5 156130881 156131045 -46954487 + (TA)n Simple_repeat Simple_repeat 1 167 0 236 29 0 29 chr5 156131117 156131151 -46954381 + (TA)n Simple_repeat Simple_repeat 1 33 0 375 111 92 7 chr5 156131190 156131343 -46954189 + (TA)n Simple_repeat Simple_repeat 2 167 0 350 147 15 0 chr5 156131561 156131629 -46953903 + (TA)n Simple_repeat Simple_repeat 2 70 0 231 260 24 16 chr5 156131896 156132019 -46953513 + (TA)n Simple_repeat Simple_repeat 2 125 0 28 0 0 0 chr5 156132091 156132119 -46953413 + AT_rich Low_complexity Low_complexity 1 28 0 2264 88 0 0 chr5 156132135 156132407 -46953125 + AluSx SINE Alu 12 283 -29 32 81 0 0 chr5 156132489 156132563 -46952969 + AT_rich Low_complexity Low_complexity 1 74 0 258 156 0 0 chr5 156133190 156133235 -46952297 - SUBTEL_sa Satellite Satellite -13 161 117 268 306 69 12 chr5 156133239 156133412 -46952120 - L1MEc LINE L1 -3384 3156 2974 1367 220 22 0 chr5 156133412 156133680 -46951852 - AluJo SINE Alu -38 274 1 1328 241 54 60 chr5 156133764 156134267 -46951265 - LTR53 LTR ERVL 0 519 20 703 235 48 44 chr5 156134278 156134778 -46950754 - L1MEc LINE L1 -3753 2787 2234 310 227 17 118 chr5 156135484 156135603 -46949929 - L2 LINE L2 -33 3239 3133 881 218 158 67 chr5 156135718 156135861 -46949671 + MLT1F LTR MaLR 26 154 -388 2321 84 0 10 chr5 156135861 156136157 -46949375 + AluY SINE Alu 1 293 -18 881 218 158 67 chr5 156136157 156136329 -46949203 + MLT1F LTR MaLR 154 370 -172 372 237 8 68 chr5 156136411 156136529 -46949003 - LTR16C LTR ERVL -281 210 100 434 104 58 234 chr5 156136546 156136638 -46948894 + MLT1F LTR MaLR 364 420 -122 1200 121 6 115 chr5 156136638 156136976 -46948556 - AluSq SINE Alu 0 303 3 434 104 58 234 chr5 156136976 156137037 -46948495 + MLT1F LTR MaLR 420 490 -52 1304 65 0 50 chr5 156137037 156137236 -46948296 + AluSc SINE Alu 1 189 -120 1742 183 30 30 chr5 156137915 156138282 -46947250 + L1MB3 LINE L1 5699 6065 -118 647 176 8 16 chr5 156138283 156138408 -46947124 + FLAM_A SINE Alu 1 124 -9 1805 182 0 7 chr5 156138429 156138731 -46946801 - AluJo SINE Alu -12 300 1 551 112 0 82 chr5 156138747 156138845 -46946687 + L1MB3 LINE L1 6053 6142 -41 26 0 0 0 chr5 156138861 156138887 -46946645 + AT_rich Low_complexity Low_complexity 1 26 0 227 115 19 19 chr5 156138890 156138942 -46946590 + L1MB4 LINE L1 6129 6180 0 26 0 0 0 chr5 156138988 156139014 -46946518 + AT_rich Low_complexity Low_complexity 1 26 0 2004 107 0 0 chr5 156139015 156139276 -46946256 - AluSq SINE Alu -52 261 1 1011 175 6 0 chr5 156139278 156139438 -46946094 - AluJb SINE Alu -18 294 134 1020 138 7 7 chr5 156139524 156139676 -46945856 - AluJb SINE Alu -14 298 147 267 191 0 0 chr5 156139735 156139798 -46945734 + (CA)n Simple_repeat Simple_repeat 1 63 0 2070 89 21 11 chr5 156140243 156140568 -46944964 - AluSq SINE Alu 0 328 1 1683 139 4 4 chr5 156140704 156140956 -46944576 - AluSq SINE Alu -4 309 58 1011 162 7 0 chr5 156141356 156141510 -46944022 + AluJo SINE Alu 84 238 -74 22 43 0 21 chr5 156141518 156141543 -46943989 + AT_rich Low_complexity Low_complexity 1 26 -20 1768 157 51 0 chr5 156141543 156141817 -46943715 + AluJo SINE Alu 1 288 -24 22 43 0 21 chr5 156141817 156141838 -46943694 + AT_rich Low_complexity Low_complexity 26 46 0 243 0 0 0 chr5 156142097 156142124 -46943408 + (T)n Simple_repeat Simple_repeat 1 27 0 2008 107 8 0 chr5 156142296 156142557 -46942975 - AluSx SINE Alu -11 301 39 1768 122 66 7 chr5 156142932 156143203 -46942329 - AluJb SINE Alu -25 287 1 448 250 54 71 chr5 156143207 156143327 -46942205 - MIR SINE MIR -74 188 71 1851 140 31 7 chr5 156143327 156143619 -46941913 - AluJb SINE Alu -13 299 1 448 250 54 71 chr5 156143619 156143682 -46941850 - MIR SINE MIR -191 71 8 1695 110 41 85 chr5 156144100 156144417 -46941115 + AluJo SINE Alu 5 307 -5 26 0 0 0 chr5 156144703 156144729 -46940803 + AT_rich Low_complexity Low_complexity 1 26 0 956 115 0 112 chr5 156144802 156145062 -46940470 - AluSq SINE Alu -82 231 1 3395 195 5 0 chr5 156145472 156146127 -46939405 + L1 LINE L1 3713 4370 -1776 7112 53 15 0 chr5 156146131 156148102 -46937430 + L1PA7 LINE L1 4182 6150 -4 494 278 21 26 chr5 156148719 156148913 -46936619 - L2 LINE L2 -436 2878 2686 555 196 27 103 chr5 156148915 156149002 -46936530 + MER3 DNA MER1_type 1 21 -141 712 198 0 0 chr5 156149002 156149128 -46936404 - FLAM_A SINE Alu -3 130 5 555 196 27 103 chr5 156149128 156149224 -46936308 + MER3 DNA MER1_type 21 123 -39 207 191 44 0 chr5 156149231 156149299 -46936233 + (TTAA)n Simple_repeat Simple_repeat 1 71 0 210 222 0 37 chr5 156149316 156149370 -46936162 - L2 LINE L2 -624 2690 2639 228 167 24 0 chr5 156149371 156149413 -46936119 + MER50 LTR ERV1 500 542 -192 1218 145 0 0 chr5 156149422 156149601 -46935931 - AluSg/x SINE Alu 0 312 134 2202 86 3 23 chr5 156149602 156149906 -46935626 - AluY SINE Alu -13 298 1 1593 130 0 50 chr5 156150211 156150512 -46935020 - AluSg SINE Alu -24 286 1 1724 176 0 17 chr5 156150512 156150813 -46934719 - AluJb SINE Alu -14 298 3 304 73 24 0 chr5 156150859 156150900 -46934632 + 5S rRNA rRNA 1 42 -79 708 205 8 0 chr5 156150959 156151081 -46934451 + FLAM_A SINE Alu 1 123 -10 627 278 68 24 chr5 156152365 156152617 -46932915 + L1MDa LINE L1 66 328 -6212 2098 249 108 20 chr5 156152787 156153064 -46932468 + L1MDa LINE L1 852 1103 -5437 1566 182 3 49 chr5 156153064 156153388 -46932144 + AluJo SINE Alu 1 309 -3 2098 249 108 20 chr5 156153388 156154271 -46931261 + L1MDa LINE L1 1103 2161 -4379 728 107 116 16 chr5 156154945 156155066 -46930466 - FLAM_C SINE Alu 0 133 1 441 273 65 7 chr5 156155330 156155469 -46930063 + MIR SINE MIR 46 192 -70 2910 138 106 22 chr5 156155473 156155532 -46930000 - Tigger2 DNA MER2_type 0 2718 2665 2219 107 14 0 chr5 156155532 156155821 -46929711 + AluSg SINE Alu 1 293 -17 2910 138 106 22 chr5 156155821 156156364 -46929168 - Tigger2 DNA MER2_type -53 2665 2065 1765 137 14 7 chr5 156156605 156156882 -46928650 + MER50 LTR ERV1 433 711 -23 292 254 0 0 chr5 156156886 156156941 -46928591 + FLAM SINE Alu 71 125 -8 186 328 107 8 chr5 156157198 156157329 -46928203 + MIR SINE MIR 3 146 -116 188 287 210 19 chr5 156157361 156157518 -46928014 - MIR SINE MIR -54 208 22 846 196 46 27 chr5 156157668 156157887 -46927645 - MER96B DNA MER1_type? -3 414 192 2649 42 0 10 chr5 156157961 156158274 -46927258 + AluY SINE Alu 1 310 -1 4278 239 72 50 chr5 156158274 156158938 -46926594 + L1MDa LINE L1 2675 3323 -3217 1775 151 28 18 chr5 156158938 156159223 -46926309 + AluJb SINE Alu 1 288 -24 4278 239 72 50 chr5 156159223 156160284 -46925248 + L1MDa LINE L1 3323 4439 -2101 845 111 8 16 chr5 156160384 156160510 -46925022 + AluJb SINE Alu 162 286 -26 1916 116 40 4 chr5 156160620 156160930 -46924602 - AluSq SINE Alu 0 320 1 1137 151 0 6 chr5 156161223 156161395 -46924137 - AluSc SINE Alu -35 274 104 241 297 22 0 chr5 156163476 156163567 -46921965 + L2 LINE L2 3216 3308 -5 2468 69 2 54 chr5 156164319 156164725 -46920807 - L1PA5 LINE L1 0 6154 5770 449 157 36 0 chr5 156164728 156164811 -46920721 - MER70-int LTR ERVL -550 4473 4388 2238 124 0 0 chr5 156166072 156166379 -46919153 - AluSg SINE Alu -3 307 1 674 203 147 6 chr5 156166681 156166844 -46918688 + AluSg/x SINE Alu 121 306 -6 943 83 23 8 chr5 156167391 156167524 -46918008 + AluSx SINE Alu 30 164 -148 387 193 148 30 chr5 156167636 156167771 -46917761 + MIR SINE MIR 112 262 0 1892 244 43 5 chr5 156168084 156168527 -46917005 - MLT1G LTR MaLR -2 588 129 2415 87 0 0 chr5 156168527 156168825 -46916707 - AluSg SINE Alu -12 298 1 211 238 48 0 chr5 156168843 156168906 -46916626 + CT-rich Low_complexity Low_complexity 1 66 0 226 224 0 0 chr5 156169503 156169552 -46915980 + (CA)n Simple_repeat Simple_repeat 1 49 0 1991 139 0 0 chr5 156170051 156170331 -46915201 - AluSx SINE Alu -32 280 1 289 87 0 0 chr5 156170335 156170381 -46915151 - L1PA13 LINE L1 -129 6034 5989 * 1714 148 17 119 chr5 156170378 156170525 -46915007 + L1PA16 LINE L1 5769 5929 -237 3147 105 2 2 chr5 156170525 156170972 -46914560 - L1PA7 LINE L1 0 6154 5708 1714 148 17 119 chr5 156170972 156171243 -46914289 + L1PA16 LINE L1 5929 6144 -22 1187 172 22 63 chr5 156171250 156171359 -46914173 + L1PA16 LINE L1 5613 5725 -406 1499 120 58 4 chr5 156171359 156171601 -46913931 - AluSx SINE Alu -28 284 30 1187 172 22 63 chr5 156171601 156171844 -46913688 + L1PA16 LINE L1 5725 5917 -214 881 161 7 7 chr5 156171849 156172004 -46913528 + L1PA16 LINE L1 5764 5918 -248 945 164 0 6 chr5 156172005 156172164 -46913368 + L1PA16 LINE L1 5762 5919 -247 841 163 12 12 chr5 156172164 156172324 -46913208 + L1PA16 LINE L1 5762 5921 -245 * 1284 178 14 11 chr5 156172321 156172750 -46912782 + L1PA16 LINE L1 5718 6033 -133 2317 99 0 0 chr5 156172849 156173152 -46912380 - AluSx SINE Alu -7 305 3 583 177 32 8 chr5 156173287 156173411 -46912121 + L1PA16 LINE L1 6040 6166 0 212 198 0 12 chr5 156174794 156174875 -46910657 + (TG)n Simple_repeat Simple_repeat 1 80 0 289 315 7 7 chr5 156174920 156175063 -46910469 + (TG)n Simple_repeat Simple_repeat 1 143 0 1149 135 0 27 chr5 156175075 156175241 -46910291 - AluSg/x SINE Alu -13 297 135 2215 95 0 3 chr5 156175241 156175536 -46909996 - AluSx SINE Alu -18 294 1 1149 135 0 27 chr5 156175536 156175554 -46909978 - AluSg/x SINE Alu -175 135 118 393 284 0 7 chr5 156175554 156175781 -46909751 + (TG)n Simple_repeat Simple_repeat 1 225 0 1655 167 45 11 chr5 156176049 156176336 -46909196 + AluJb SINE Alu 1 297 -15 292 300 100 0 chr5 156176336 156176446 -46909086 + MIR SINE MIR 24 144 -118 2090 110 7 23 chr5 156176452 156176762 -46908770 + AluSq SINE Alu 1 305 -8 395 278 40 27 chr5 156176898 156177063 -46908469 - MIR3 SINE MIR -25 183 16 626 210 48 27 chr5 156177070 156177277 -46908255 + MIR SINE MIR 38 250 -12 262 304 20 81 chr5 156177308 156177350 -46908182 + MIR SINE MIR 121 164 -98 2284 106 0 0 chr5 156177350 156177652 -46907880 + AluSx SINE Alu 1 302 -10 262 304 20 81 chr5 156177652 156177757 -46907775 + MIR SINE MIR 164 259 -3 293 98 0 0 chr5 156177766 156177837 -46907695 - Alu SINE Alu 0 313 243 182 289 325 0 chr5 156178609 156178692 -46906840 + MIR SINE MIR 150 259 -3 295 337 31 37 chr5 156178714 156178877 -46906655 + MIR3 SINE MIR 13 174 -34 310 206 16 0 chr5 156179072 156179135 -46906397 - MIR3 SINE MIR -31 177 114 1438 146 109 22 chr5 156179217 156179510 -46906022 + AluJo SINE Alu 1 312 0 192 212 182 45 chr5 156179517 156179583 -46905949 + MIR SINE MIR 112 186 -76 245 349 57 46 chr5 156180171 156180346 -46905186 - MIR3 SINE MIR -15 193 17 194 164 0 73 chr5 156180300 156180355 -46905177 + L2 LINE L2 334 384 -2930 * 219 186 47 0 chr5 156180570 156180613 -46904919 - MIR3 SINE MIR -50 158 114 1033 183 6 0 chr5 156180813 156180993 -46904539 + FRAM SINE Alu 1 173 -3 2167 107 0 16 chr5 156181168 156181478 -46904054 - AluY SINE Alu -6 305 1 189 291 36 0 chr5 156181502 156181557 -46903975 + MIR3 SINE MIR 108 164 -44 723 214 115 22 chr5 156181890 156182072 -46903460 + MIR SINE MIR 7 205 -57 210 259 81 87 chr5 156182090 156182275 -46903257 + MIR SINE MIR 78 261 -1 1134 171 6 0 chr5 156182542 156182718 -46902814 - MER69A DNA AcHobo 0 177 1 604 91 0 70 chr5 156183171 156183475 -46902057 + (GCTG)n Simple_repeat Simple_repeat 1 282 0 808 50 0 70 chr5 156183536 156183996 -46901536 + (GCTG)n Simple_repeat Simple_repeat 1 427 0 714 83 0 73 chr5 156184010 156184611 -46900921 + (GCTG)n Simple_repeat Simple_repeat 1 557 0 766 70 0 69 chr5 156184629 156185217 -46900315 + (GCTG)n Simple_repeat Simple_repeat 1 547 0 206 250 37 28 chr5 156185349 156185457 -46900075 + (GCTTG)n Simple_repeat Simple_repeat 5 113 0 1257 204 9 0 chr5 156235926 156236147 -46849385 - MER58A DNA MER1_type -1 223 1 238 283 113 78 chr5 156236194 156236424 -46849108 + L2 LINE L2 3015 3252 -61 2197 122 0 3 chr5 156236468 156236771 -46848761 + AluSx SINE Alu 1 302 -10 2299 83 0 0 chr5 156238366 156238644 -46846888 + AluSg SINE Alu 1 278 -32 468 0 0 0 chr5 156238644 156238696 -46846836 + (CAAAA)n Simple_repeat Simple_repeat 5 56 0 1280 243 16 86 chr5 156238696 156239149 -46846383 - L1MD2 LINE L1 -17 6342 5922 632 184 0 0 chr5 156239149 156239252 -46846280 + FLAM_C SINE Alu 8 110 -33 22 35 0 0 chr5 156239256 156239285 -46846247 + AT_rich Low_complexity Low_complexity 1 29 0 2049 168 64 0 chr5 156239285 156239660 -46845872 + Tigger6a DNA MER2_type 362 760 -323 1101 183 20 10 chr5 156239660 156239857 -46845675 - AluJb SINE Alu -22 290 92 329 167 33 0 chr5 156239996 156240056 -46845476 - Tigger6 DNA MER2_type -320 1277 1216 1384 121 114 85 chr5 156240078 156240202 -46845330 + AluJb SINE Alu 24 143 -169 1805 121 33 72 chr5 156240202 156240507 -46845025 + AluSx SINE Alu 1 293 -19 1384 121 114 85 chr5 156240507 156240663 -46844869 + AluJb SINE Alu 143 312 0 605 132 107 66 chr5 156240695 156240816 -46844716 - FLAM_C SINE Alu -16 127 2 1070 149 64 25 chr5 156240817 156241052 -46844480 + Tigger6 DNA MER2_type 1351 1594 -3 9355 231 76 32 chr5 156241053 156243002 -46842530 - L1MDa LINE L1 -903 5637 3484 2230 128 0 3 chr5 156243002 156243314 -46842218 - AluSx SINE Alu -1 311 1 9355 231 76 32 chr5 156243314 156244746 -46840786 - L1MDa LINE L1 -3056 3484 2117 2811 72 19 3 chr5 156244745 156245121 -46840411 - L1P4 LINE L1 -469 5699 5318 * 2424 69 7 7 chr5 156245662 156245968 -46839564 - AluY SINE Alu -5 306 1 2807 128 47 0 chr5 156246009 156246461 -46839071 - L1P4 LINE L1 -816 5330 4858 2945 86 51 7 chr5 156246461 156246886 -46838646 + L1PA13 LINE L1 5714 6162 -1 4356 187 61 31 chr5 156246891 156247856 -46837676 - L1MDa LINE L1 -4413 2127 1138 1768 192 38 24 chr5 156247856 156248225 -46837307 - MLT1A2 LTR MaLR 0 374 1 4356 187 61 31 chr5 156248225 156248481 -46837051 - L1MDa LINE L1 -5402 1138 891 1573 287 36 97 chr5 156248699 156249773 -46835759 - L1MDa LINE L1 -5547 993 20 2036 124 0 0 chr5 156250505 156250787 -46834745 - AluSq SINE Alu 0 313 32 2107 125 3 31 chr5 156251542 156251862 -46833670 + AluSx SINE Alu 2 312 0 266 296 0 0 chr5 156252097 156252178 -46833354 - MIR3 SINE MIR -15 193 113 1108 198 175 19 chr5 156252775 156253032 -46832500 + AluJo SINE Alu 1 297 -5 263 274 29 20 chr5 156254134 156254236 -46831296 - MIR SINE MIR -2 260 158 202 258 112 0 chr5 156254386 156254475 -46831057 + L2 LINE L2 95 193 -3121 1929 285 130 43 chr5 156254534 156255094 -46830438 + L2 LINE L2 1374 1884 -1430 1835 168 30 0 chr5 156255094 156255392 -46830140 + AluJo SINE Alu 1 307 -5 1929 285 130 43 chr5 156255392 156256066 -46829466 + L2 LINE L2 1884 2759 -555 2239 95 0 17 chr5 156256066 156256362 -46829170 + AluSg SINE Alu 1 291 -19 1929 285 130 43 chr5 156256362 156256596 -46828936 + L2 LINE L2 2759 2971 -343 297 181 222 0 chr5 156256996 156257068 -46828464 + L2 LINE L2 3226 3313 0 989 160 5 57 chr5 156258154 156258348 -46827184 - AluJb SINE Alu -1 311 128 1758 163 27 7 chr5 156258389 156258689 -46826843 - AluJb SINE Alu -6 306 1 298 335 38 25 chr5 156258973 156259131 -46826401 + L3 LINE CR1 1345 1504 -73 2241 108 0 13 chr5 156259191 156259496 -46826036 - AluSx SINE Alu -11 301 1 1963 163 0 13 chr5 156259526 156259832 -46825700 + AluJo SINE Alu 1 302 -10 1615 182 46 3 chr5 156259920 156260244 -46825288 - MER58B DNA MER1_type -3 338 1 1952 109 4 0 chr5 156262456 156262713 -46822819 + AluSx SINE Alu 35 292 -20 781 326 82 11 chr5 156263276 156263853 -46821679 + L2 LINE L2 2470 3082 -190 714 204 0 8 chr5 156264019 156264151 -46821381 + AluJo/FLAM SINE Alu 2 132 -180 1552 173 45 31 chr5 156264153 156264442 -46821090 + AluJo SINE Alu 1 293 -19 217 224 13 26 chr5 156264550 156264626 -46820906 + (TAA)n Simple_repeat Simple_repeat 3 77 0 355 296 75 19 chr5 156265371 156265530 -46820002 + MLT1H LTR MaLR 1 168 -381 294 29 0 0 chr5 156265609 156265644 -46819888 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 7185 48 4 53 chr5 156265651 156267353 -46818179 + SVA Other Other 1 1385 -1 236 203 116 0 chr5 156267416 156267485 -46818047 - LTR16A1 LTR ERVL -34 423 347 1601 183 63 3 chr5 156267730 156268030 -46817502 - MLT1A1 LTR MaLR 0 365 48 1443 172 49 9 chr5 156268032 156268359 -46817173 + L1MB7 LINE L1 5736 6107 -77 2040 199 78 80 chr5 156268382 156268984 -46816548 - L1MD3 LINE L1 -726 7269 6669 186 43 0 0 chr5 156268984 156269007 -46816525 + (TG)n Simple_repeat Simple_repeat 2 24 0 266 116 0 0 chr5 156269007 156269050 -46816482 - MLT1A1 LTR MaLR -25 340 298 216 228 0 0 chr5 156269074 156269131 -46816401 + (TA)n Simple_repeat Simple_repeat 2 58 0 2630 100 11 3 chr5 156269135 156269496 -46816036 + THE1B LTR MaLR 1 364 0 205 316 11 0 chr5 156269670 156269765 -46815767 + (TA)n Simple_repeat Simple_repeat 2 97 0 1817 186 64 48 chr5 156269765 156270265 -46815267 - L1MC4a LINE L1 -1190 6618 6111 365 109 0 0 chr5 156270646 156270701 -46814831 + L1MB8 LINE L1 6113 6167 -11 187 335 0 82 chr5 156271507 156271665 -46813867 + MIR SINE MIR 47 191 -71 184 264 73 64 chr5 156272883 156272993 -46812539 - L2 LINE L2 -21 3251 3141 340 246 167 47 chr5 156274755 156274970 -46810562 + MIR SINE MIR 12 252 -10 692 153 0 0 chr5 156276382 156276480 -46809052 - AluJb SINE Alu -19 293 196 251 146 0 0 chr5 156276631 156276672 -46808860 - L2 LINE L2 -6 3266 3226 1339 145 10 0 chr5 156276723 156276930 -46808602 - AluJb SINE Alu -11 301 93 883 277 48 3 chr5 156277720 156278063 -46807469 + L1MC5 LINE L1 5490 5802 -319 201 147 0 0 chr5 156278668 156278702 -46806830 + (A)n Simple_repeat Simple_repeat 1 34 0 1799 150 0 87 chr5 156278997 156279331 -46806201 + AluJo SINE Alu 1 305 -7 836 309 58 19 chr5 156279616 156280030 -46805502 + HAL1b LINE L1 211 640 -708 2220 202 125 72 chr5 156280427 156281297 -46804235 + L1MC5 LINE L1 6617 7532 -429 399 274 145 17 chr5 156281378 156281557 -46803975 + L1ME3A LINE L1 5962 6163 -7 2366 91 0 0 chr5 156281685 156281982 -46803550 - AluSg1 SINE Alu -11 298 2 23 0 0 0 chr5 156281986 156282009 -46803523 + AT_rich Low_complexity Low_complexity 1 23 0 5561 132 26 42 chr5 156282388 156283678 -46801854 + L1MA8 LINE L1 4811 6120 -171 1717 95 171 4 chr5 156283678 156283930 -46801602 + AluSq SINE Alu 1 294 -19 5561 132 26 42 chr5 156283930 156284078 -46801454 + L1MA8 LINE L1 6120 6221 -70 1967 168 0 0 chr5 156284078 156284375 -46801157 - AluJo SINE Alu -15 297 1 5561 132 26 42 chr5 156284375 156284436 -46801096 + L1MA8 LINE L1 6221 6281 -10 23 54 0 0 chr5 156284442 156284479 -46801053 + AT_rich Low_complexity Low_complexity 1 37 0 2247 117 3 0 chr5 156284841 156285141 -46800391 - AluSg SINE Alu -9 301 1 2027 121 7 24 chr5 156286867 156287164 -46798368 + AluSg SINE Alu 1 292 -18 730 209 0 0 chr5 156288180 156288309 -46797223 + FLAM_C SINE Alu 1 129 -4 1142 167 34 10 chr5 156288913 156289117 -46796415 + MER3 DNA MER1_type 1 209 0 1051 179 0 0 chr5 156291272 156291440 -46794092 - AluJb SINE Alu -11 301 134 2479 91 0 0 chr5 156291615 156291924 -46793608 + AluSx SINE Alu 1 309 -3 315 216 122 0 chr5 156292087 156292161 -46793371 - MIR SINE MIR -54 208 126 6323 17 0 2 chr5 156293321 156294192 -46791340 - L1P1 LINE L1 -624 5531 4663 5786 8 0 0 chr5 156294181 156294814 -46790718 + L1HS LINE L1 5521 6153 -2 * 22 0 0 0 chr5 156294814 156294836 -46790696 + AT_rich Low_complexity Low_complexity 1 22 0 1959 137 6 40 chr5 156295997 156296319 -46789213 + AluJb SINE Alu 2 312 0 1149 113 43 43 chr5 156296362 156296547 -46788985 - AluSp SINE Alu 0 313 129 2037 117 18 0 chr5 156296652 156296934 -46788598 + AluSx SINE Alu 1 287 -25 42 20 0 0 chr5 156296935 156296984 -46788548 + AT_rich Low_complexity Low_complexity 1 49 0 685 197 0 0 chr5 156296984 156297101 -46788431 - FLAM_C SINE Alu -25 118 2 975 129 0 7 chr5 156297386 156297526 -46788006 + FRAM SINE Alu 20 158 -18 182 273 0 0 chr5 156298161 156298205 -46787327 - L2 LINE L2 0 3272 3229 993 322 59 8 chr5 156298630 156298984 -46786548 + LTR16A LTR ERVL 79 450 0 262 285 122 23 chr5 156299210 156299382 -46786150 + L2 LINE L2 1264 1452 -1862 466 162 0 61 chr5 156299518 156299617 -46785915 + L1MB5 LINE L1 5747 5839 -335 1764 199 6 3 chr5 156299717 156300053 -46785479 + L1MB5 LINE L1 5838 6174 0 197 348 101 19 chr5 156300225 156300432 -46785100 + L2 LINE L2 1932 2155 -1159 257 333 0 0 chr5 156300530 156300632 -46784900 + L1MC/D LINE L1 4735 4836 -1310 340 356 0 52 chr5 156300783 156300796 -46784736 + L1MC/D LINE L1 4884 4896 -1250 1695 163 24 14 chr5 156300796 156301084 -46784448 - AluJo SINE Alu -21 291 1 340 356 0 52 chr5 156301084 156301300 -46784232 + L1MC/D LINE L1 4896 5101 -1045 662 265 24 16 chr5 156301404 156301711 -46783821 + L1MC/D LINE L1 5146 5463 -747 549 248 0 25 chr5 156301735 156301856 -46783676 + L1MC/D LINE L1 5540 5657 -2151 1002 208 14 32 chr5 156301858 156302074 -46783458 + MLT1E2 LTR MaLR 401 612 -14 1088 126 98 0 chr5 156303007 156303181 -46782351 + MSTD LTR MaLR 1 191 -205 530 160 50 76 chr5 156303182 156303301 -46782231 + FLAM_A SINE Alu 1 116 -26 837 233 18 27 chr5 156303317 156303536 -46781996 + MSTD LTR MaLR 180 396 0 739 280 36 11 chr5 156304471 156304746 -46780786 - L2 LINE L2 -2 3311 3030 2691 165 38 46 chr5 156304749 156305336 -46780196 - L1MD3 LINE L1 -13 7982 7401 321 224 92 0 chr5 156305341 156305417 -46780115 - MLT1F1 LTR MaLR -450 117 35 2064 128 17 0 chr5 156305438 156305736 -46779796 - AluSx SINE Alu -9 303 1 1128 142 4 27 chr5 156305775 156306038 -46779494 + AluJb SINE Alu 1 311 -1 4781 186 30 35 chr5 156306059 156307562 -46777970 + L1M1 LINE L1 21 1637 -5928 7058 111 17 36 chr5 156307564 156307655 -46777877 + L1MA2 LINE L1 4232 4323 -1981 2127 122 17 0 chr5 156307655 156307951 -46777581 - AluSg SINE Alu -9 301 1 7058 111 17 36 chr5 156307951 156308985 -46776547 + L1MA2 LINE L1 4323 5321 -983 2326 114 0 0 chr5 156308985 156309292 -46776240 - AluSx SINE Alu -5 307 1 7058 111 17 36 chr5 156309292 156310256 -46775276 + L1MA2 LINE L1 5321 6302 -2 606 167 27 8 chr5 156310258 156310412 -46775120 - L1MC3 LINE L1 -756 7029 6914 2270 259 124 9 chr5 156310416 156311234 -46774298 - L2 LINE L2 -277 3036 2111 219 170 19 38 chr5 156311753 156311806 -46773726 + L2 LINE L2 3254 3305 -8 359 251 133 80 chr5 156312218 156312668 -46772864 + L1ME4a LINE L1 5648 6121 0 200 167 0 0 chr5 156312668 156312698 -46772834 + polypurine Low_complexity Low_complexity 2 31 0 2552 77 3 3 chr5 156312877 156313189 -46772343 - AluSp SINE Alu -1 312 1 2033 160 36 26 chr5 156317526 156317913 -46767619 - L1MD3 LINE L1 -10 7985 7595 666 275 60 24 chr5 156317939 156318190 -46767342 - MIR SINE MIR 0 262 3 21 0 0 0 chr5 156319869 156319890 -46765642 + AT_rich Low_complexity Low_complexity 1 21 0 2333 104 0 0 chr5 156320064 156320362 -46765170 + AluSg SINE Alu 1 298 -12 10163 37 6 145 chr5 156322001 156323622 -46761910 + SVA Other Other 12 1386 0 245 259 0 0 chr5 156324298 156324356 -46761176 + L3b LINE CR1 1252 1309 -274 2590 204 55 94 chr5 156325517 156326286 -46759246 + MER21B LTR ERV1 1 739 -124 754 175 36 0 chr5 156326919 156327056 -46758476 - FAM SINE Alu -42 143 2 708 260 11 30 chr5 156327076 156327279 -46758253 - MIR SINE MIR 0 262 63 568 224 87 19 chr5 156327521 156327682 -46757850 + MIR SINE MIR 1 172 -90 407 333 64 26 chr5 156328658 156328892 -46756640 - MIR SINE MIR -16 246 4 1851 149 0 0 chr5 156329760 156330048 -46755484 + AluJb SINE Alu 1 288 -24 663 265 71 0 chr5 156330613 156330783 -46754749 + MIR SINE MIR 78 259 -3 238 284 42 32 chr5 156332427 156332522 -46753010 - MIR SINE MIR 0 262 167 1802 158 0 7 chr5 156332592 156332890 -46752642 + AluJo SINE Alu 1 296 -16 475 250 144 32 chr5 156333139 156333327 -46752205 + MIR SINE MIR 3 211 -51 311 260 120 0 chr5 156333619 156333719 -46751813 + L2 LINE L2 3158 3269 -3 410 196 196 103 chr5 156333939 156334143 -46751389 - MER102b DNA MER1_type -16 325 103 870 148 0 0 chr5 156334189 156334331 -46751201 - FLAM_C SINE Alu -1 142 1 307 273 20 96 chr5 156334736 156334985 -46750547 + MARNA DNA Mariner 224 453 -133 402 301 157 35 chr5 156335007 156335236 -46750296 - MIR SINE MIR 0 262 6 450 268 71 42 chr5 156335843 156336011 -46749521 - MIR SINE MIR 0 262 90 742 209 41 23 chr5 156337592 156337764 -46747768 + MIR SINE MIR 59 233 -29 1299 188 0 40 chr5 156338682 156338958 -46746574 + AluJb SINE Alu 44 308 -4 3263 189 57 30 chr5 156338965 156339148 -46746384 + L1MB4 LINE L1 4503 4680 -1466 1586 201 7 0 chr5 156339148 156339446 -46746086 + AluSx SINE Alu 1 300 -12 3263 189 57 30 chr5 156339446 156339684 -46745848 + L1MB4 LINE L1 4680 4910 -1236 1995 95 44 0 chr5 156339684 156339958 -46745574 + AluY SINE Alu 1 286 -25 3263 189 57 30 chr5 156339958 156340343 -46745189 + L1MB4 LINE L1 4910 5332 -814 1136 175 4 50 chr5 156340343 156340583 -46744949 + AluJo SINE Alu 72 300 -12 4269 142 24 15 chr5 156340585 156341330 -46744202 + L1MB4 LINE L1 5319 6070 -110 246 81 0 0 chr5 156342328 156342365 -46743167 + (CA)n Simple_repeat Simple_repeat 2 38 0 247 284 11 11 chr5 156342784 156342879 -46742653 + GA-rich Low_complexity Low_complexity 3 97 0 193 233 23 0 chr5 156344099 156344142 -46741390 - MIR SINE MIR -109 153 110 813 284 40 9 chr5 156344163 156344385 -46741147 + MIR SINE MIR 14 242 -20 1638 139 6 61 chr5 156344387 156344717 -46740815 - AluJb SINE Alu 0 312 1 2116 116 0 7 chr5 156346067 156346368 -46739164 + AluSx SINE Alu 4 302 -10 814 263 105 0 chr5 156347465 156347701 -46737831 - MIR SINE MIR 0 262 3 1971 42 0 0 chr5 156347814 156348051 -46737481 - L1PA4 LINE L1 -3 6152 5916 302 0 0 0 chr5 156348051 156348084 -46737448 + L1P LINE L1 4915 4947 -1199 292 77 39 0 chr5 156348160 156348212 -46737320 + (CA)n Simple_repeat Simple_repeat 1 54 0 316 130 29 0 chr5 156348411 156348480 -46737052 + (CA)n Simple_repeat Simple_repeat 1 71 0 592 271 94 5 chr5 156348832 156349024 -46736508 + MIR SINE MIR 40 248 -14 1226 155 0 32 chr5 156349986 156350205 -46735327 + AluSx SINE Alu 1 212 -100 465 49 0 16 chr5 156350205 156350266 -46735266 + AluSq/x SINE Alu 78 137 -175 2216 92 3 0 chr5 156350270 156350565 -46734967 + AluSx SINE Alu 1 296 -16 310 304 96 9 chr5 156351426 156351541 -46733991 + L2 LINE L2 3147 3271 -1 1498 165 14 47 chr5 156351645 156351942 -46733590 + AluJo SINE Alu 1 287 -25 4847 175 72 107 chr5 156352508 156353042 -46732490 + L1MB4 LINE L1 3574 4125 -2055 2327 72 7 7 chr5 156353042 156353349 -46732183 - AluY SINE Alu -4 307 1 4847 175 72 107 chr5 156353349 156353650 -46731882 + L1MB4 LINE L1 4125 4435 -1745 2007 132 0 3 chr5 156353650 156353953 -46731579 - AluSq SINE Alu -11 302 1 4847 175 72 107 chr5 156353953 156354461 -46731071 + L1MB4 LINE L1 4435 4959 -1221 1000 191 0 12 chr5 156354461 156354629 -46730903 + FRAM SINE Alu 1 166 0 4847 175 72 107 chr5 156354629 156354872 -46730660 + L1MB4 LINE L1 4959 5209 -971 2089 96 3 3 chr5 156354872 156355165 -46730367 + AluSq SINE Alu 1 293 -20 4847 175 72 107 chr5 156355165 156355892 -46729640 + L1MB4 LINE L1 5209 5781 -399 504 68 0 0 chr5 156355892 156355965 -46729567 + (TG)n Simple_repeat Simple_repeat 2 74 0 4847 175 72 107 chr5 156355965 156356089 -46729443 + L1MB4 LINE L1 5781 5908 -272 546 147 0 11 chr5 156356106 156356201 -46729331 + FLAM_A SINE Alu 46 139 -3 210 222 0 0 chr5 156356234 156356288 -46729244 + (TG)n Simple_repeat Simple_repeat 1 54 0 739 192 0 8 chr5 156356296 156356426 -46729106 - FLAM_C SINE Alu -13 130 2 1713 177 0 19 chr5 156356558 156356874 -46728658 + AluJb SINE Alu 1 310 -2 749 286 43 0 chr5 156356903 156357179 -46728353 - L1M4 LINE L1 -2122 4024 3737 226 246 149 61 chr5 156357235 156357349 -46728183 + L2 LINE L2 3149 3272 0 229 246 164 0 chr5 156358869 156358930 -46726602 - L2 LINE L2 -1 3271 3201 847 90 0 0 chr5 156359917 156360028 -46725504 + AluSq/x SINE Alu 1 111 -201 1329 168 117 79 chr5 156361186 156361383 -46724149 - MLT1B LTR MaLR 0 390 202 282 29 0 0 chr5 156361383 156361418 -46724114 + (GA)n Simple_repeat Simple_repeat 2 36 0 1329 168 117 79 chr5 156361418 156361589 -46723943 - MLT1B LTR MaLR -188 202 8 1537 99 9 9 chr5 156361779 156362001 -46723531 - AluSg/x SINE Alu -19 291 70 348 337 30 12 chr5 156362114 156362280 -46723252 - MIR SINE MIR -28 234 66 813 205 13 0 chr5 156362387 156362538 -46722994 + MLT1D LTR MaLR 353 505 0 706 263 23 0 chr5 156363682 156363857 -46721675 - MIR SINE MIR -82 180 2 21 0 0 0 chr5 156364350 156364371 -46721161 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr5 156365690 156365734 -46719798 + (CA)n Simple_repeat Simple_repeat 1 44 0 191 331 15 98 chr5 156365836 156365969 -46719563 + L3b LINE CR1 1135 1256 -327 1837 127 32 0 chr5 156366103 156366386 -46719146 + AluSx SINE Alu 1 292 -20 2205 88 3 3 chr5 156366508 156366802 -46718730 + AluSp SINE Alu 1 294 -19 1821 150 14 0 chr5 156367282 156367575 -46717957 + AluJb SINE Alu 1 297 -15 757 296 168 32 chr5 156368242 156368786 -46716746 - L2 LINE L2 -2 3311 2715 1212 129 0 15 chr5 156368904 156369105 -46716427 - AluSg/x SINE Alu -2 308 111 273 93 222 0 chr5 156369228 156369282 -46716250 + MADE1 DNA Mariner 1 66 -14 1857 114 18 4 chr5 156369338 156369618 -46715914 + AluSq SINE Alu 17 300 -13 423 259 0 58 chr5 156369620 156369759 -46715773 - MIR SINE MIR -108 154 24 422 237 153 8 chr5 156370060 156370191 -46715341 - MIR SINE MIR -1 261 112 596 120 37 46 chr5 156370210 156370256 -46715276 + L1M4c LINE L1 5 50 -6334 5459 60 26 46 chr5 156370256 156370828 -46714704 + MER4E LTR ERV1 1 583 -183 1995 115 0 3 chr5 156370828 156371114 -46714418 - AluSq SINE Alu -8 305 21 5459 60 26 46 chr5 156371114 156371131 -46714401 + MER4E LTR ERV1 583 599 -167 1937 133 0 22 chr5 156371131 156371447 -46714085 - AluSc SINE Alu 0 309 1 5459 60 26 46 chr5 156371447 156371638 -46713894 + MER4E LTR ERV1 599 766 0 596 120 37 46 chr5 156371638 156371699 -46713833 + L1M4c LINE L1 50 111 -6273 610 147 63 0 chr5 156371704 156371799 -46713733 + Tigger3(Golem) DNA MER2_type 2 102 -2927 286 158 0 0 chr5 156371797 156371854 -46713678 + Tigger3(Golem) DNA MER2_type 274 330 -2699 * 1453 194 19 0 chr5 156371864 156372122 -46713410 + AluJo SINE Alu 1 263 -49 587 218 0 9 chr5 156372130 156372240 -46713292 - AluJb SINE Alu -14 298 190 910 147 5 88 chr5 156372344 156372399 -46713133 - AluJb SINE Alu -125 187 129 2327 70 0 13 chr5 156372399 156372698 -46712834 - AluY SINE Alu -16 295 1 910 147 5 88 chr5 156372698 156372846 -46712686 - AluJb SINE Alu -183 129 1 4020 101 60 156 chr5 156372887 156373430 -46712102 + Tigger3(Golem) DNA MER2_type 2153 2703 -326 751 164 0 8 chr5 156373430 156373558 -46711974 - FLAM_A SINE Alu -6 136 10 4020 101 60 156 chr5 156373558 156373857 -46711675 + Tigger3(Golem) DNA MER2_type 2703 3029 0 2349 141 79 25 chr5 156373857 156374282 -46711250 + L1M4c LINE L1 113 563 -5821 1515 176 54 0 chr5 156374282 156374561 -46710971 + AluJb SINE Alu 6 299 -13 781 243 0 0 chr5 156374601 156374753 -46710779 + FAM SINE Alu 16 167 -18 4640 125 40 99 chr5 156374760 156375026 -46710506 + L1M4c LINE L1 555 835 -5549 213 39 0 0 chr5 156375026 156375052 -46710480 + (TG)n Simple_repeat Simple_repeat 2 27 0 4640 125 40 99 chr5 156375052 156375063 -46710469 + L1M4c LINE L1 835 845 -5539 2216 89 0 20 chr5 156375063 156375367 -46710165 - AluSg SINE Alu -12 298 1 4640 125 40 99 chr5 156375367 156375402 -46710130 + L1M4c LINE L1 845 880 -5504 218 63 0 152 chr5 156375402 156375481 -46710051 + (TCTCCC)n Simple_repeat Simple_repeat 5 71 0 6396 71 3 46 chr5 156375413 156377305 -46708227 + SVA Other Other 1 1386 0 4640 125 40 99 chr5 156375481 156377939 -46707593 + L1M4c LINE L1 880 1454 -4930 2022 118 3 3 chr5 156377939 156378235 -46707297 + AluSg SINE Alu 1 296 -14 4640 125 40 99 chr5 156378235 156378333 -46707199 + L1M4c LINE L1 1454 1556 -4828 1684 102 18 18 chr5 156378573 156378856 -46706676 + L1M4c LINE L1 1951 2233 -4151 1988 140 3 0 chr5 156378856 156379164 -46706368 + AluSx SINE Alu 1 309 -3 342 181 12 24 chr5 156379169 156379252 -46706280 + L1M4c LINE L1 3199 3280 -3102 964 83 0 8 chr5 156379252 156379385 -46706147 + AluY SINE Alu 1 132 -179 1832 182 51 83 chr5 156379498 156379644 -46705888 + L1M4c LINE L1 3356 3505 -2877 1534 174 69 0 chr5 156379644 156379919 -46705613 + AluJo SINE Alu 1 294 -18 1832 182 51 83 chr5 156379919 156379962 -46705570 + L1M4c LINE L1 3505 3548 -2834 626 192 108 0 chr5 156379962 156380082 -46705450 + FLAM_A SINE Alu 1 133 0 2042 132 3 0 chr5 156380084 156380394 -46705138 + AluSx SINE Alu 2 312 0 1832 182 51 83 chr5 156380394 156380466 -46705066 + L1M4c LINE L1 3549 3622 -2760 2137 92 7 3 chr5 156380466 156380770 -46704762 + AluSq SINE Alu 1 305 -8 1832 182 51 83 chr5 156380770 156381106 -46704426 + L1M4c LINE L1 3622 3939 -2443 2096 113 10 0 chr5 156381107 156381407 -46704125 + AluSx SINE Alu 1 303 -9 862 199 0 0 chr5 156381432 156381583 -46703949 - FRAM SINE Alu -12 154 4 1883 139 81 3 chr5 156381587 156381910 -46703622 - MLT1A1-int LTR MaLR -1387 348 1 1930 154 70 9 chr5 156381910 156382254 -46703278 - MLT1A1 LTR MaLR 0 365 1 411 244 6 131 chr5 156382254 156382351 -46703181 - MIR SINE MIR -107 155 47 2394 81 0 0 chr5 156382351 156382658 -46702874 - AluY SINE Alu -4 307 1 243 0 0 0 chr5 156382663 156382690 -46702842 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1988 113 0 0 chr5 156382690 156382964 -46702568 - AluSg SINE Alu -36 274 1 411 244 6 131 chr5 156382964 156383027 -46702505 - MIR SINE MIR -217 45 9 211 258 45 15 chr5 156384913 156384979 -46700553 - L2 LINE L2 0 3272 3205 421 307 123 46 chr5 156385211 156385716 -46699816 + L2 LINE L2 2738 3272 0 254 257 200 34 chr5 156386422 156386597 -46698935 - MIR SINE MIR -10 252 49 1742 161 3 10 chr5 156386598 156386902 -46698630 + AluJo SINE Alu 1 302 -10 2051 105 0 52 chr5 156386905 156387230 -46698302 + AluSp SINE Alu 1 308 -5 432 273 20 0 chr5 156389181 156389280 -46696252 + L2 LINE L2 3169 3269 -3 245 245 19 25 chr5 156389544 156389673 -46695859 - MIR SINE MIR -10 252 60 350 286 30 59 chr5 156391074 156391211 -46694321 + MIR SINE MIR 19 152 -56 1634 164 19 16 chr5 156391214 156391525 -46694007 + AluJo SINE Alu 1 312 0 3461 157 27 5 chr5 156391811 156392403 -46693129 + MER6A DNA MER2_type 1 605 0 271 292 58 0 chr5 156393373 156393493 -46692039 + MER102b DNA MER1_type 214 340 -1 413 316 94 39 chr5 156393560 156393794 -46691738 - L2 LINE L2 -8 3264 3018 2131 119 0 0 chr5 156394060 156394362 -46691170 + AluSg SINE Alu 1 302 -8 298 263 158 0 chr5 156394909 156395061 -46690471 + L1ME4a LINE L1 5612 5787 -383 350 280 85 69 chr5 156395069 156395258 -46690274 + L1ME4a LINE L1 5836 6027 -94 2269 74 16 19 chr5 156395261 156395572 -46689960 - AluSg SINE Alu 0 310 1 214 191 118 44 chr5 156395869 156395937 -46689595 - L2 LINE L2 -6 3307 3235 2157 109 0 7 chr5 156396006 156396309 -46689223 + AluY SINE Alu 1 301 -10 215 346 0 0 chr5 156396348 156396400 -46689132 + MER5A DNA MER1_type 55 106 -83 1658 142 7 40 chr5 156396439 156396735 -46688797 - AluJo SINE Alu -9 303 18 1136 286 16 44 chr5 156396883 156397178 -46688354 - MLT1L LTR MaLR -17 598 255 2115 106 0 3 chr5 156397178 156397470 -46688062 + AluSx SINE Alu 11 301 -11 1136 286 16 44 chr5 156397470 156397610 -46687922 - MLT1L LTR MaLR -360 255 113 3077 105 11 7 chr5 156397678 156398116 -46687416 + MER9 LTR ERVK 1 440 -71 2274 93 3 10 chr5 156398116 156398429 -46687103 - AluY SINE Alu 0 311 1 2115 111 10 0 chr5 156398451 156398748 -46686784 - AluSq SINE Alu -13 300 1 1996 122 0 3 chr5 156399002 156399319 -46686213 - AluSc SINE Alu 0 309 1 2174 119 0 0 chr5 156399494 156399797 -46685735 + AluSc SINE Alu 1 303 -6 1284 84 0 0 chr5 156399798 156399965 -46685567 + AluSq SINE Alu 134 300 -13 254 233 188 57 chr5 156400095 156400123 -46685409 + L1MC4 LINE L1 7813 7836 -206 1987 118 0 0 chr5 156400123 156400430 -46685102 + AluSg SINE Alu 1 307 0 254 233 188 57 chr5 156400430 156400576 -46684956 + L1MC4 LINE L1 7836 8011 -31 229 219 0 16 chr5 156400739 156400803 -46684729 + L1 LINE L1 4995 5057 -1089 392 301 79 50 chr5 156400851 156401193 -46684339 + L1MC/D LINE L1 5437 5788 -2020 964 196 112 13 chr5 156401465 156401689 -46683843 - AluJo SINE Alu -23 289 44 502 191 12 0 chr5 156401805 156401889 -46683643 + MER46A DNA MER2_type 1 85 -151 488 187 19 9 chr5 156401884 156401991 -46683541 + MER46A DNA MER2_type 114 221 -15 * 2120 119 0 3 chr5 156402261 156402571 -46682961 - AluSq SINE Alu -4 309 1 242 261 29 29 chr5 156402636 156402705 -46682827 - MIR SINE MIR -166 96 28 2122 104 0 7 chr5 156402780 156403078 -46682454 - AluSx SINE Alu -16 296 1 1125 82 7 0 chr5 156403571 156403718 -46681814 - AluSq/x SINE Alu -165 148 1 22 56 0 0 chr5 156403978 156404014 -46681518 + AT_rich Low_complexity Low_complexity 1 36 0 2004 116 3 3 chr5 156404554 156404856 -46680676 - AluSc SINE Alu -7 302 1 1106 164 15 5 chr5 156404935 156405130 -46680402 + AluJb SINE Alu 29 225 -87 350 286 30 59 chr5 156405377 156405514 -46680018 + MIR SINE MIR 19 152 -56 1634 164 19 16 chr5 156405517 156405828 -46679704 + AluJo SINE Alu 1 312 0 3461 157 27 5 chr5 156406114 156406706 -46678826 + MER6A DNA MER2_type 1 605 0 271 292 58 0 chr5 156407676 156407796 -46677736 + MER102b DNA MER1_type 214 340 -1 413 316 94 39 chr5 156407863 156408097 -46677435 - L2 LINE L2 -8 3264 3018 2162 101 0 3 chr5 156408363 156408660 -46676872 + AluSg SINE Alu 1 296 -14 2170 145 132 5 chr5 156408896 156409276 -46676256 + MSTA LTR MaLR 1 428 0 3386 112 46 31 chr5 156410287 156410685 -46674847 + MER1A DNA MER1_type 1 410 -2290 1871 140 7 0 chr5 156410685 156410971 -46674561 + AluSx SINE Alu 19 306 -6 3386 112 46 31 chr5 156410971 156411091 -46674441 + MER1A DNA MER1_type 410 527 0 429 262 110 16 chr5 156411110 156411301 -46674231 - MIR SINE MIR -50 212 4 181 369 76 20 chr5 156411453 156411651 -46673881 + L3b LINE CR1 1299 1507 -76 224 182 0 23 chr5 156411762 156411806 -46673726 + MIR SINE MIR 102 144 -64 1904 132 34 0 chr5 156412076 156412372 -46673160 + AluSx SINE Alu 1 306 -6 1516 176 10 40 chr5 156412624 156412920 -46672612 + AluJo SINE Alu 1 287 -25 2302 92 0 0 chr5 156412921 156413224 -46672308 + AluSg SINE Alu 1 303 -7 872 150 0 0 chr5 156413239 156413366 -46672166 + FLAM_A SINE Alu 5 131 -2 1863 142 6 10 chr5 156413841 156414152 -46671380 + AluJo SINE Alu 1 310 -2 1008 137 68 73 chr5 156414249 156414408 -46671124 + MER106A DNA MER1_type 1 160 -76 1804 140 0 14 chr5 156414408 156414701 -46670831 + AluSx SINE Alu 1 289 -23 1008 137 68 73 chr5 156414701 156414775 -46670757 + MER106A DNA MER1_type 160 233 -3 582 198 18 0 chr5 156414853 156414964 -46670568 - MER81 DNA DNA 0 114 2 352 179 0 64 chr5 156416043 156416057 -46669475 - MARNA DNA Mariner -177 409 396 2276 70 3 17 chr5 156416057 156416358 -46669174 - AluSx SINE Alu -15 297 1 352 179 0 64 chr5 156416358 156416421 -46669111 - MARNA DNA Mariner -190 396 337 464 276 135 32 chr5 156416421 156416504 -46669028 - MIR SINE MIR -10 252 179 2274 50 4 0 chr5 156416504 156416813 -46668719 - AluY SINE Alu 0 310 1 464 276 135 32 chr5 156416813 156416913 -46668619 - MIR SINE MIR -83 179 49 1574 177 0 24 chr5 156417029 156417323 -46668209 + AluJo SINE Alu 1 287 -25 245 315 27 27 chr5 156417333 156417444 -46668088 - MARNA DNA Mariner -338 248 138 2206 98 3 0 chr5 156418116 156418421 -46667111 + AluSp SINE Alu 2 307 -6 23 0 0 0 chr5 156419561 156419584 -46665948 + GC_rich Low_complexity Low_complexity 1 23 0 2184 92 0 13 chr5 156419968 156420274 -46665258 + AluSx SINE Alu 1 302 -10 1022 148 23 42 chr5 156420292 156420509 -46665023 - AluJo SINE Alu -21 291 79 588 283 76 20 chr5 156420549 156420747 -46664785 - MIR SINE MIR -43 219 11 1191 214 110 27 chr5 156421583 156421671 -46663861 + MLT1A1 LTR MaLR 1 80 -285 2268 96 0 0 chr5 156421671 156421973 -46663559 + AluSc SINE Alu 1 302 -7 1191 214 110 27 chr5 156421973 156422221 -46663311 + MLT1A1 LTR MaLR 80 365 0 2095 107 0 7 chr5 156422492 156422790 -46662742 + AluSx SINE Alu 1 296 -16 360 291 139 13 chr5 156423310 156423461 -46662071 - L2 LINE L2 -1 3271 3102 1485 134 19 50 chr5 156423485 156423747 -46661785 + AluJb SINE Alu 1 254 -58 188 265 96 24 chr5 156423787 156423870 -46661662 - MIR SINE MIR -50 212 124 678 184 191 6 chr5 156423896 156424064 -46661468 - MER3 DNA MER1_type 0 209 11 2334 77 0 0 chr5 156424065 156424362 -46661170 + AluSp SINE Alu 1 297 -16 2097 236 128 6 chr5 156425165 156425695 -46659837 - MLT1G1 LTR MaLR 0 595 1 2295 100 3 0 chr5 156425939 156426249 -46659283 + AluSp SINE Alu 1 311 -2 2321 144 78 0 chr5 156426797 156427194 -46658338 + MSTA LTR MaLR 1 428 0 681 252 98 47 chr5 156427633 156427867 -46657665 + MIR SINE MIR 12 257 -5 2177 91 10 3 chr5 156427867 156428165 -46657367 - AluSq SINE Alu -13 300 1 252 344 11 0 chr5 156429046 156429139 -46656393 - MIR SINE MIR -57 205 112 264 247 104 13 chr5 156429302 156429379 -46656153 - L2 LINE L2 -1 3271 3188 1712 207 90 25 chr5 156429384 156429527 -46656005 + MLT1H1 LTR MaLR 10 142 -388 1877 112 3 49 chr5 156429527 156429831 -46655701 - AluSx SINE Alu -20 292 3 1712 207 90 25 chr5 156429831 156430148 -46655384 + MLT1H1 LTR MaLR 142 502 -28 292 225 159 60 chr5 156430148 156430299 -46655233 - MER58C DNA MER1_type 0 215 50 2006 133 3 3 chr5 156430323 156430624 -46654908 + AluSx SINE Alu 1 301 -11 296 211 0 0 chr5 156430669 156430726 -46654806 + MLT1H1 LTR MaLR 498 554 -1 238 348 11 33 chr5 156430864 156430956 -46654576 - L2 LINE L2 -220 3052 2963 535 306 151 0 chr5 156430961 156431167 -46654365 + LTR16A LTR ERVL 209 445 -5 1934 91 33 11 chr5 156431193 156431468 -46654064 - AluSg SINE Alu -16 294 14 1879 132 10 14 chr5 156431473 156431768 -46653764 - AluSx SINE Alu -18 294 1 698 159 18 0 chr5 156431794 156431905 -46653627 - MER7A DNA MER2_type 0 336 224 1874 110 12 64 chr5 156431905 156432299 -46653233 + Charlie3 DNA MER1_type 1 2712 0 1148 68 7 0 chr5 156432299 156432443 -46653089 - MER7A DNA MER2_type -105 232 88 2253 91 7 0 chr5 156432443 156432750 -46652782 + AluSx SINE Alu 1 309 -3 1114 137 0 0 chr5 156432750 156432925 -46652607 + AluSg/x SINE Alu 134 308 -4 674 189 0 0 chr5 156432925 156433036 -46652496 - MER7A DNA MER2_type -237 109 1 335 167 19 0 chr5 156433113 156433167 -46652365 + MER81 DNA DNA 56 110 -4 414 272 82 60 chr5 156433171 156433403 -46652129 - MLT1K LTR MaLR -136 452 216 2605 146 8 46 chr5 156433434 156433574 -46651958 - L1MB7 LINE L1 -19 6165 6021 1603 169 42 0 chr5 156433574 156433858 -46651674 + AluJb SINE Alu 1 296 -16 2605 146 8 46 chr5 156433858 156434216 -46651316 - L1MB7 LINE L1 -163 6021 5686 1428 182 9 0 chr5 156434217 156434442 -46651090 - MER8 DNA MER2_type -3 236 10 292 143 0 0 chr5 156434459 156434501 -46651031 - L1MB7 LINE L1 -540 5644 5603 577 299 26 65 chr5 156434501 156434575 -46650957 - MLT1K LTR MaLR -364 224 149 2338 42 0 0 chr5 156434575 156434889 -46650643 - AluY SINE Alu 0 311 1 1896 167 0 0 chr5 156434889 156435189 -46650343 - AluSx SINE Alu -12 300 1 577 299 26 65 chr5 156435189 156435344 -46650188 - MLT1K LTR MaLR -437 151 3 683 236 108 15 chr5 156435356 156435559 -46649973 - MIR SINE MIR -11 251 30 339 272 25 0 chr5 156436670 156436751 -46648781 - L2 LINE L2 0 3313 3231 1974 128 17 0 chr5 156436948 156437246 -46648286 + AluJb SINE Alu 1 303 -9 942 117 0 29 chr5 156437292 156437429 -46648103 - FLAM_C SINE Alu 0 133 1 279 325 103 8 chr5 156437530 156437656 -46647876 - L2 LINE L2 -576 2738 2601 801 105 0 0 chr5 156437839 156437944 -46647588 + AluSq/x SINE Alu 8 112 -200 926 90 0 0 chr5 156438044 156438166 -46647366 - AluYb8 SINE Alu -196 122 1 3487 105 8 31 chr5 156438221 156438305 -46647227 - MER9 LTR ERVK 0 511 427 2366 78 7 0 chr5 156438305 156438614 -46646918 + AluY SINE Alu 1 311 0 3487 105 8 31 chr5 156438614 156439052 -46646480 - MER9 LTR ERVK -84 427 1 1136 286 16 44 chr5 156439120 156439260 -46646272 + MLT1L LTR MaLR 113 255 -360 2115 106 0 3 chr5 156439260 156439552 -46645980 - AluSx SINE Alu -11 301 11 1136 286 16 44 chr5 156439552 156439847 -46645685 + MLT1L LTR MaLR 255 598 -17 1658 142 7 40 chr5 156439995 156440291 -46645241 + AluJo SINE Alu 18 303 -9 215 346 0 0 chr5 156440330 156440382 -46645150 - MER5A DNA MER1_type -83 106 55 638 150 23 54 chr5 156440388 156440421 -46645111 + L1ME LINE L1 5552 5584 -578 2137 88 0 26 chr5 156440421 156440727 -46644805 - AluSg SINE Alu -10 300 3 638 150 23 54 chr5 156440727 156440742 -46644790 + L1ME LINE L1 5584 5598 -564 1935 115 54 0 chr5 156440742 156440903 -46644629 - AluSq SINE Alu -2 311 160 315 0 0 0 chr5 156440903 156440938 -46644594 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1935 115 54 0 chr5 156440938 156441071 -46644461 - AluSq SINE Alu -153 160 1 1402 184 0 83 chr5 156441071 156441407 -46644125 - AluJo SINE Alu -4 308 1 638 150 23 54 chr5 156441407 156441536 -46643996 + L1ME LINE L1 5596 5711 -451 632 203 8 0 chr5 156441543 156441661 -46643871 - FLAM_C SINE Alu -23 120 2 325 158 66 13 chr5 156441662 156441738 -46643794 + L1ME LINE L1 5700 5779 -383 1302 192 81 0 chr5 156441769 156442030 -46643502 + AluJo SINE Alu 1 282 -30 216 0 0 0 chr5 156442033 156442057 -46643475 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2213 106 0 0 chr5 156442057 156442360 -46643172 + AluSc SINE Alu 1 303 -6 495 107 27 0 chr5 156442360 156442435 -46643097 + U6 snRNA snRNA 31 107 0 2119 110 3 0 chr5 156443367 156443666 -46641866 + AluSx SINE Alu 5 304 -8 329 298 126 13 chr5 156443706 156443857 -46641675 - MIR SINE MIR -75 187 20 404 267 7 53 chr5 156444054 156444204 -46641328 - MIR SINE MIR 0 262 120 1123 148 0 0 chr5 156444305 156444474 -46641058 - MER50 LTR ERV1 -24 710 542 216 0 0 0 chr5 156444475 156444499 -46641033 + (TCTCCC)n Simple_repeat Simple_repeat 3 26 0 5405 57 14 7 chr5 156444499 156445712 -46639820 + SVA Other Other 53 1194 -192 2566 24 0 0 chr5 156445712 156446008 -46639524 + AluYa5 SINE Alu 1 296 -15 1403 29 57 6 chr5 156446008 156446212 -46639320 + SVA Other Other 1184 1386 0 1734 100 0 0 chr5 156446221 156446452 -46639080 + AluSx SINE Alu 3 233 -79 2732 155 12 23 chr5 156446519 156447002 -46638530 - MER50 LTR ERV1 -256 478 1 843 130 23 0 chr5 156447037 156447168 -46638364 + AluJ SINE Alu 1 134 -178 31 0 0 0 chr5 156447192 156447223 -46638309 + AT_rich Low_complexity Low_complexity 1 31 0 1054 183 0 5 chr5 156447223 156447414 -46638118 + AluJ SINE Alu 121 310 -2 425 228 298 6 chr5 156447414 156447585 -46637947 + L1M4 LINE L1 2813 3033 -3113 1862 121 33 0 chr5 156447588 156447900 -46637632 + AluSx SINE Alu 1 321 0 1067 107 0 7 chr5 156447900 156448050 -46637482 + AluSq SINE Alu 126 274 -39 381 279 195 23 chr5 156448050 156448144 -46637388 + L1M4 LINE L1 3161 3238 -2908 2131 115 0 13 chr5 156448144 156448456 -46637076 + AluSx SINE Alu 1 308 -4 381 279 195 23 chr5 156448456 156448576 -46636956 + L1M4 LINE L1 3238 3412 -2734 485 269 64 14 chr5 156448582 156448723 -46636809 - MIR SINE MIR -86 176 29 385 264 109 18 chr5 156448743 156448853 -46636679 - L2 LINE L2 -13 3259 3140 322 214 129 0 chr5 156448854 156448924 -46636608 - MER96 DNA MER1_type? -2 173 95 749 332 56 49 chr5 156449002 156449589 -46635943 - L2 LINE L2 -260 3012 2416 317 330 8 0 chr5 156449594 156449712 -46635820 + (TCCA)n Simple_repeat Simple_repeat 4 122 0 559 270 20 7 chr5 156449785 156449937 -46635595 - L2 LINE L2 0 3313 3160 2082 80 0 80 chr5 156449940 156450264 -46635268 - AluSq SINE Alu -15 298 1 3605 172 55 1 chr5 156450298 156450994 -46634538 + L1MC3 LINE L1 6745 7477 -308 1607 145 120 0 chr5 156450996 156451272 -46634260 + AluJb SINE Alu 2 310 -2 527 189 111 20 chr5 156451273 156451426 -46634106 + LTR23 LTR ERV1 16 182 -255 1310 148 24 69 chr5 156451472 156451762 -46633770 + LTR23 LTR ERV1 161 437 0 683 161 17 0 chr5 156451762 156451880 -46633652 + L1MC3 LINE L1 7655 7774 -11 230 254 16 16 chr5 156451880 156451937 -46633595 + AluJo SINE Alu 2 58 -244 3023 116 18 10 chr5 156451937 156452080 -46633452 - MER61E LTR ERV1 0 569 429 2692 19 0 0 chr5 156452080 156452391 -46633141 + AluY SINE Alu 1 311 0 2267 69 3 38 chr5 156452399 156452716 -46632816 + AluSp SINE Alu 1 306 -7 3023 116 18 10 chr5 156452716 156453178 -46632354 - MER61E LTR ERV1 -146 423 3 1063 158 58 50 chr5 156453178 156453269 -46632263 + AluJo SINE Alu 53 142 -170 2266 77 0 10 chr5 156453269 156453568 -46631964 + AluY SINE Alu 1 296 -15 1063 158 58 50 chr5 156453568 156453717 -46631815 + AluJo SINE Alu 142 295 -17 45 19 0 0 chr5 156453722 156453774 -46631758 + AT_rich Low_complexity Low_complexity 1 52 0 2147 103 0 0 chr5 156453815 156454105 -46631427 - AluSx SINE Alu -22 290 1 2032 138 3 0 chr5 156454134 156454438 -46631094 + AluSx SINE Alu 1 305 -7 565 324 54 5 chr5 156454438 156454660 -46630872 - L2 LINE L2 -181 3132 2900 299 123 14 68 chr5 156454722 156454758 -46630774 - L1MB2 LINE L1 0 6171 6139 2217 85 3 7 chr5 156454758 156455063 -46630469 - AluY SINE Alu -7 304 1 299 123 14 68 chr5 156455063 156455099 -46630433 - L1MB2 LINE L1 -32 6139 6103 1816 136 0 36 chr5 156455102 156455238 -46630294 + AluSq SINE Alu 1 140 -173 2091 106 16 3 chr5 156455238 156455541 -46629991 + AluSq SINE Alu 1 307 -6 1816 136 0 36 chr5 156455541 156455706 -46629826 + AluSq SINE Alu 140 291 -22 448 138 0 147 chr5 156455728 156455769 -46629763 - MER7A DNA MER2_type -2934 104 89 2188 105 0 0 chr5 156455769 156456064 -46629468 - AluSq SINE Alu -18 295 1 448 138 0 147 chr5 156456064 156456131 -46629401 - MER7A DNA MER2_type -2949 89 14 831 148 0 0 chr5 156456143 156456265 -46629267 - FLAM_C SINE Alu -18 125 4 880 111 82 0 chr5 156456274 156456409 -46629123 + MER7A DNA MER2_type 94 239 -97 1141 139 0 0 chr5 156456409 156456581 -46628951 - AluSg/x SINE Alu -15 295 124 210 37 0 0 chr5 156456581 156456608 -46628924 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2028 115 0 3 chr5 156456608 156456894 -46628638 - AluSq SINE Alu -28 285 1 498 172 140 0 chr5 156456895 156456988 -46628544 + MER7A DNA MER2_type 231 336 0 1376 219 57 20 chr5 156456991 156457342 -46628190 - L1ME LINE L1 -383 5779 5416 1878 199 73 101 chr5 156457357 156458000 -46627532 + LTR8A LTR ERV1 34 658 -69 1019 173 14 33 chr5 156458000 156458214 -46627318 - AluJo SINE Alu -18 294 85 320 186 0 151 chr5 156458214 156458300 -46627232 + LTR8A LTR ERV1 655 727 0 2034 140 0 0 chr5 156458431 156458731 -46626801 - AluSx SINE Alu -12 300 1 2089 96 7 23 chr5 156458740 156459043 -46626489 - AluSx SINE Alu -14 298 1 1470 248 64 31 chr5 156459104 156459559 -46625973 - L2 LINE L2 -688 2626 2157 1318 103 27 0 chr5 156459589 156459773 -46625759 + LTR26B LTR ERV1 1 189 -342 769 71 45 0 chr5 156459773 156459885 -46625647 + AluSg/x SINE Alu 190 306 -4 2150 136 12 32 chr5 156459885 156460075 -46625457 + LTR26B LTR ERV1 194 376 -155 2280 64 0 0 chr5 156460075 156460381 -46625151 + AluY SINE Alu 1 306 0 2150 136 12 32 chr5 156460381 156460534 -46624998 + LTR26B LTR ERV1 376 531 0 616 209 23 35 chr5 156460541 156460713 -46624819 - L2 LINE L2 -1233 2081 1912 422 282 8 8 chr5 156461133 156461250 -46624282 - L2 LINE L2 0 3313 3197 257 194 16 16 chr5 156462600 156462662 -46622870 + CT-rich Low_complexity Low_complexity 1 62 0 1389 180 12 0 chr5 156462717 156462972 -46622560 + L1MB8 LINE L1 4561 4818 -1328 704 182 0 16 chr5 156462985 156463106 -46622426 + FLAM_A SINE Alu 10 128 -14 298 169 4 0 chr5 156463115 156463178 -46622354 + L1MB8 LINE L1 5304 5367 -779 1430 101 0 0 chr5 156463178 156463367 -46622165 + AluSg SINE Alu 1 189 -121 1210 173 157 0 chr5 156463516 156463757 -46621775 + AluJo SINE Alu 1 285 -27 2162 96 10 6 chr5 156463757 156464069 -46621463 + AluSq SINE Alu 1 313 0 1210 173 157 0 chr5 156464069 156464082 -46621450 + AluJo SINE Alu 285 295 -17 4324 158 30 13 chr5 156464123 156464610 -46620922 + L1MB8 LINE L1 5395 5872 -306 2029 134 3 3 chr5 156464610 156464917 -46620615 + AluSx SINE Alu 1 307 -5 2351 52 3 26 chr5 156464917 156465223 -46620309 + AluY SINE Alu 1 300 -11 4324 158 30 13 chr5 156465223 156465494 -46620038 + L1MB8 LINE L1 5871 6167 -11 22 0 0 0 chr5 156465560 156465582 -46619950 + AT_rich Low_complexity Low_complexity 1 22 0 2204 91 3 10 chr5 156465588 156465763 -46619769 - AluSc SINE Alu -3 306 132 2065 113 0 0 chr5 156465763 156466077 -46619455 - AluSg SINE Alu 0 310 1 2204 91 3 10 chr5 156466077 156466209 -46619323 - AluSc SINE Alu -177 132 1 698 184 209 0 chr5 156466251 156466414 -46619118 + MIR SINE MIR 54 250 -12 360 301 161 5 chr5 156467491 156467618 -46617914 - MIR SINE MIR -40 222 116 2536 36 0 3 chr5 156467618 156467921 -46617611 + AluY SINE Alu 1 302 -9 360 301 161 5 chr5 156467921 156467979 -46617553 - MIR SINE MIR -146 116 8 985 90 0 8 chr5 156469003 156469136 -46616396 + AluSp SINE Alu 1 132 -181 1955 119 34 3 chr5 156469487 156469780 -46615752 - AluSx SINE Alu -10 302 1 1749 169 3 3 chr5 156470362 156470669 -46614863 + AluSx SINE Alu 1 307 -5 1339 176 129 0 chr5 156470685 156470941 -46614591 + AluJb SINE Alu 3 291 -11 2129 123 0 0 chr5 156471177 156471478 -46614054 + AluSg SINE Alu 1 301 -9 1770 97 89 7 chr5 156471485 156471754 -46613778 - AluSx SINE Alu -21 291 1 902 116 31 0 chr5 156472053 156472182 -46613350 + AluSq/x SINE Alu 1 133 -180 2369 90 3 0 chr5 156472183 156472494 -46613038 + AluSx SINE Alu 1 312 0 205 250 163 11 chr5 156472564 156472656 -46612876 + MIR SINE MIR 51 156 -106 184 286 249 16 chr5 156472800 156472985 -46612547 + L2 LINE L2 2731 2958 -356 2293 89 0 16 chr5 156473471 156473785 -46611747 + AluSc SINE Alu 1 309 0 246 317 141 21 chr5 156473801 156473943 -46611589 - L2 LINE L2 -173 3099 2941 229 140 0 20 chr5 156474022 156474072 -46611460 - Alu SINE Alu 0 302 254 936 238 13 30 chr5 156474204 156474564 -46610968 + L2 LINE L2 2703 3056 -257 1738 146 0 15 chr5 156474596 156474864 -46610668 + AluJb SINE Alu 1 264 -48 864 181 36 0 chr5 156474920 156475086 -46610446 + MLT1F LTR MaLR 12 183 -384 2283 136 27 36 chr5 156475086 156475339 -46610193 + L1MD3 LINE L1 7578 7827 -168 2170 112 0 0 chr5 156475339 156475642 -46609890 - AluSg SINE Alu -7 303 1 2283 136 27 36 chr5 156475642 156475800 -46609732 + L1MD3 LINE L1 7827 7985 -10 996 178 163 10 chr5 156475804 156476006 -46609526 + MLT1F LTR MaLR 154 386 -156 1278 115 0 0 chr5 156476006 156476188 -46609344 - AluSc SINE Alu -9 300 119 1442 149 0 0 chr5 156476309 156476530 -46609002 - AluSx SINE Alu -91 221 1 339 25 0 0 chr5 156476616 156476656 -46608876 + (ATG)n Simple_repeat Simple_repeat 2 41 0 1748 128 40 4 chr5 156476661 156476935 -46608597 - AluJo SINE Alu -26 286 3 575 292 40 45 chr5 156476935 156477137 -46608395 - MIR3 SINE MIR -5 203 3 441 266 141 17 chr5 156477249 156477426 -46608106 - L2 LINE L2 -13 3300 3102 1450 164 98 7 chr5 156477436 156477722 -46607810 + AluJb SINE Alu 1 312 0 703 134 8 60 chr5 156477723 156477857 -46607675 - MLT1F1 LTR MaLR -37 530 404 2289 61 0 7 chr5 156477858 156478151 -46607381 + AluY SINE Alu 1 291 -20 2348 82 0 22 chr5 156478160 156478478 -46607054 + AluSp SINE Alu 1 311 -2 1889 147 0 10 chr5 156478919 156479232 -46606300 - AluJb SINE Alu 0 312 3 1908 136 24 0 chr5 156479270 156479393 -46606139 + AluSx SINE Alu 1 120 -192 207 0 0 0 chr5 156479393 156479416 -46606116 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1908 136 24 0 chr5 156479416 156479587 -46605945 + AluSx SINE Alu 120 302 -10 342 326 54 16 chr5 156479607 156479736 -46605796 - L2 LINE L2 -2 3270 3137 348 300 17 8 chr5 156479781 156479901 -46605631 - MIR SINE MIR -19 243 123 2147 107 0 3 chr5 156480041 156480339 -46605193 + AluSx SINE Alu 1 297 -15 715 75 104 19 chr5 156480479 156480585 -46604947 + AluSp/q SINE Alu 183 297 -16 340 265 10 0 chr5 156480929 156481027 -46604505 - L1M4c LINE L1 -4180 2204 2106 3116 203 53 33 chr5 156481106 156481182 -46604350 - L1M4c LINE L1 -4320 2064 1991 2124 102 0 10 chr5 156481182 156481485 -46604047 - AluSq SINE Alu -13 300 1 3116 203 53 33 chr5 156481485 156482286 -46603246 - L1M4c LINE L1 -4393 1991 1070 2034 112 3 26 chr5 156482286 156482589 -46602943 - AluSg SINE Alu -14 296 1 3116 203 53 33 chr5 156482589 156482629 -46602903 - L1M4c LINE L1 -5314 1070 1032 2187 98 0 10 chr5 156482630 156482935 -46602597 - AluSq SINE Alu -11 302 1 2698 13 0 6 chr5 156482941 156483254 -46602278 - AluY SINE Alu 0 311 1 926 112 56 14 chr5 156483254 156483397 -46602135 + MER61E LTR ERV1 421 569 0 230 254 16 16 chr5 156483397 156483454 -46602078 - AluJ/FLAM SINE Alu -244 58 2 683 161 17 0 chr5 156483454 156483572 -46601960 - L1MC3 LINE L1 -11 7774 7655 1310 148 24 69 chr5 156483572 156483862 -46601670 - LTR23 LTR ERV1 0 437 161 527 189 111 20 chr5 156483908 156484061 -46601471 - LTR23 LTR ERV1 -255 182 16 1183 154 150 0 chr5 156484062 156484282 -46601250 - AluJb SINE Alu -3 309 57 1515 174 12 0 chr5 156484410 156484663 -46600869 + AluJb SINE Alu 32 287 -25 2072 78 0 7 chr5 156485121 156485432 -46600100 + AluSc SINE Alu 1 309 0 185 218 146 18 chr5 156487032 156487087 -46598445 + MIR3 SINE MIR 143 204 -4 1827 60 11 37 chr5 156488102 156488370 -46597162 - AluSc SINE Alu -10 299 39 677 229 161 9 chr5 156488436 156488659 -46596873 - MIR SINE MIR -5 257 1 212 257 14 43 chr5 156488666 156488736 -46596796 - MIR SINE MIR -103 105 38 362 210 62 0 chr5 156488884 156488965 -46596567 + Charlie5 DNA MER1_type 3 88 -2524 511 166 131 21 chr5 156489314 156489423 -46596109 - MIR SINE MIR -101 161 30 1964 77 36 15 chr5 156489423 156489731 -46595801 - AluY SINE Alu 0 314 1 511 166 131 21 chr5 156489731 156489765 -46595767 - MIR SINE MIR -232 30 1 2318 87 0 0 chr5 156490019 156490319 -46595213 - AluY SINE Alu -11 300 1 2149 89 14 0 chr5 156490636 156490928 -46594604 - AluSc SINE Alu -13 296 1 1749 121 39 7 chr5 156490930 156491212 -46594320 - AluSc SINE Alu -18 291 1 1708 139 31 7 chr5 156491214 156491501 -46594031 - AluSx SINE Alu -18 294 1 2151 112 0 0 chr5 156491661 156491966 -46593566 - AluSx SINE Alu -7 305 1 1134 35 0 28 chr5 156492008 156492151 -46593381 + L1PA3 LINE L1 6016 6154 -1 1576 126 119 22 chr5 156492288 156492557 -46592975 + AluSx SINE Alu 7 301 -11 459 106 0 0 chr5 156492570 156492659 -46592873 - AluJ/FRAM SINE Alu 0 311 223 2867 145 16 26 chr5 156492806 156493351 -46592181 - L1 LINE L1 -796 5350 4811 23 0 0 0 chr5 156493730 156493753 -46591779 + AT_rich Low_complexity Low_complexity 1 23 0 2087 112 3 0 chr5 156493757 156494051 -46591481 + AluSx SINE Alu 2 296 -16 296 227 127 82 chr5 156494107 156494217 -46591315 + L2 LINE L2 3181 3295 -18 2046 112 3 0 chr5 156494530 156494824 -46590708 + AluSx SINE Alu 1 295 -17 1680 148 16 16 chr5 156495122 156495432 -46590100 + AluJb SINE Alu 1 310 -2 2263 69 10 7 chr5 156495841 156496132 -46589400 - AluY SINE Alu -19 292 1 1067 112 0 0 chr5 156496132 156496275 -46589257 - AluSg SINE Alu -167 143 1 837 167 7 13 chr5 156496467 156496617 -46588915 + FRAM SINE Alu 2 150 -26 29 47 0 0 chr5 156496632 156496675 -46588857 + AT_rich Low_complexity Low_complexity 1 43 0 398 282 166 61 chr5 156496946 156497372 -46588160 + L2 LINE L2 1700 2080 -1234 1644 109 164 4 chr5 156497372 156497628 -46587904 - AluSx SINE Alu -5 297 1 1329 131 80 87 chr5 156497632 156497944 -46587588 - AluJb SINE Alu -2 310 1 398 282 166 61 chr5 156497944 156498054 -46587478 + L2 LINE L2 2082 2298 -1016 742 182 0 0 chr5 156498205 156498337 -46587195 + AluJb SINE Alu 175 306 -6 443 241 105 0 chr5 156498510 156498643 -46586889 + L2 LINE L2 3165 3311 -2 2205 89 0 3 chr5 156498739 156499032 -46586500 - AluSp SINE Alu -21 292 1 334 306 112 18 chr5 156499100 156499132 -46586400 + MIR SINE MIR 61 89 -173 1480 135 16 63 chr5 156499132 156499450 -46586082 - AluSx SINE Alu -4 308 6 334 306 112 18 chr5 156499450 156499587 -46585945 + MIR SINE MIR 89 246 -16 2112 51 0 14 chr5 156499885 156500161 -46585371 + AluY SINE Alu 35 306 -5 1316 161 15 33 chr5 156500166 156500439 -46585093 + AluJo SINE Alu 1 268 -44 180 111 0 0 chr5 156500969 156500996 -46584536 + (TCTCCC)n Simple_repeat Simple_repeat 6 32 0 264 247 155 21 chr5 156502892 156502989 -46582543 - MIR3 SINE MIR -36 172 63 1194 166 8 38 chr5 156503017 156503252 -46582280 - AluJb SINE Alu -18 294 67 29 60 0 0 chr5 156503352 156503402 -46582130 + AT_rich Low_complexity Low_complexity 1 50 0 1742 104 0 29 chr5 156504101 156504379 -46581153 + AluSx SINE Alu 21 290 -22 1721 138 24 7 chr5 156505483 156505780 -46579752 + AluSx SINE Alu 1 302 -10 251 196 112 47 chr5 156506008 156506115 -46579417 + L1MC/D LINE L1 5703 5816 -1992 1322 202 61 4 chr5 156506585 156506862 -46578670 + AluJo SINE Alu 1 293 -19 727 165 0 0 chr5 156507046 156507155 -46578377 + 5S rRNA rRNA 2 110 -11 1891 118 0 7 chr5 156507288 156507568 -46577964 + AluSg SINE Alu 13 290 -20 435 246 8 15 chr5 156508184 156508314 -46577218 - AluJb SINE Alu -182 130 2 591 220 34 25 chr5 156509201 156509319 -46576213 - L2 LINE L2 0 3272 3154 636 240 80 23 chr5 156509614 156509789 -46575743 + MIR SINE MIR 21 205 -57 263 114 0 0 chr5 156509878 156509913 -46575619 + FLAM SINE Alu 84 118 -15 209 125 0 42 chr5 156509919 156509967 -46575565 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 270 354 47 0 chr5 156510127 156510254 -46575278 + L3b LINE CR1 1321 1453 -130 2357 63 0 0 chr5 156510487 156510788 -46574744 + AluY SINE Alu 1 301 -10 207 100 0 0 chr5 156510877 156510907 -46574625 + (A)n Simple_repeat Simple_repeat 1 30 0 2109 102 3 0 chr5 156511068 156511379 -46574153 - AluSp SINE Alu 0 312 1 306 312 24 16 chr5 156511420 156511545 -46573987 + CT-rich Low_complexity Low_complexity 1 126 0 2035 118 0 20 chr5 156511639 156511943 -46573589 + AluSx SINE Alu 1 298 -14 310 252 10 39 chr5 156512042 156512145 -46573387 + MER103 DNA DNA 59 158 -8 495 291 28 60 chr5 156512186 156512392 -46573140 - MIR SINE MIR -11 251 48 1913 125 7 0 chr5 156512392 156512689 -46572843 - AluSx SINE Alu -13 299 1 495 291 28 60 chr5 156512689 156512726 -46572806 - MIR SINE MIR -214 48 11 967 257 102 62 chr5 156512837 156513307 -46572225 - L2 LINE L2 -7 3306 2818 2228 202 85 30 chr5 156513396 156513902 -46571630 - MLT1F LTR MaLR -8 534 1 197 62 0 31 chr5 156514187 156514219 -46571313 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 214 339 0 0 chr5 156515174 156515236 -46570296 + CT-rich Low_complexity Low_complexity 4 65 0 461 215 159 0 chr5 156515625 156515732 -46569800 + L2 LINE L2 3188 3311 -2 2187 74 0 24 chr5 156515788 156516084 -46569448 + AluSc SINE Alu 1 289 -20 391 293 93 94 chr5 156516247 156516582 -46568950 - L2 LINE L2 0 3272 2938 2219 88 0 23 chr5 156516582 156516887 -46568645 + AluSq SINE Alu 1 298 -15 391 293 93 94 chr5 156516887 156517111 -46568421 - L2 LINE L2 -334 2938 2776 1558 184 7 17 chr5 156517111 156517404 -46568128 + AluJo SINE Alu 1 290 -22 391 293 93 94 chr5 156517404 156517659 -46567873 - L2 LINE L2 -496 2776 2522 1973 125 0 7 chr5 156518128 156518417 -46567115 + AluSx SINE Alu 1 287 -25 2103 99 7 7 chr5 156518440 156518743 -46566789 + AluSq SINE Alu 1 303 -10 2659 181 87 32 chr5 156518743 156518872 -46566660 - L1M4 LINE L1 -5368 1174 1054 2149 103 0 22 chr5 156518872 156519183 -46566349 + AluSx SINE Alu 1 304 -8 2659 181 87 32 chr5 156519183 156519683 -46565849 - L1M4 LINE L1 -5488 1054 510 2119 96 0 3 chr5 156519825 156520118 -46565414 + AluSc SINE Alu 1 292 -17 348 248 73 18 chr5 156520153 156520262 -46565270 - L1M4 LINE L1 -6275 267 153 407 182 61 10 chr5 156520309 156520408 -46565124 - FLAM_C SINE Alu -10 133 30 519 296 81 12 chr5 156520421 156520593 -46564939 + MIR SINE MIR 32 215 -47 2504 158 79 12 chr5 156520758 156521257 -46564275 + L1MB7 LINE L1 5597 6137 -47 905 161 12 12 chr5 156521257 156521419 -46564113 - AluJb SINE Alu -20 292 131 1914 112 0 17 chr5 156521420 156521714 -46563818 - AluSx SINE Alu -23 289 1 1267 191 60 57 chr5 156522033 156522332 -46563200 - AluJo SINE Alu -11 301 2 1564 147 37 23 chr5 156522384 156522683 -46562849 - AluSx SINE Alu -9 303 1 1345 200 17 10 chr5 156522693 156522983 -46562549 - AluJo SINE Alu -20 292 1 478 33 0 17 chr5 156523232 156523292 -46562240 + AluY SINE Alu 86 144 -167 2575 39 0 0 chr5 156523518 156523823 -46561709 - AluY SINE Alu -2 309 5 2019 89 78 0 chr5 156523835 156524116 -46561416 - AluY SINE Alu -8 303 1 883 123 0 43 chr5 156524134 156524272 -46561260 - FLAM_C SINE Alu -1 132 1 3501 149 43 34 chr5 156524299 156524590 -46560942 - L1MB7 LINE L1 -10 6174 5887 2293 82 0 3 chr5 156524590 156524895 -46560637 - AluY SINE Alu -7 304 1 3501 149 43 34 chr5 156524895 156524951 -46560581 - L1MB7 LINE L1 -297 5887 5833 2090 113 3 3 chr5 156524951 156525253 -46560279 - AluSx SINE Alu -10 302 1 1722 143 7 18 chr5 156525255 156525541 -46559991 - AluJo SINE Alu -8 304 22 3501 149 43 34 chr5 156525541 156525860 -46559672 - L1MB7 LINE L1 -351 5833 5498 451 260 65 8 chr5 156526091 156526214 -46559318 + L2 LINE L2 3182 3311 -2 396 88 0 0 chr5 156526920 156526977 -46558555 + (CA)n Simple_repeat Simple_repeat 1 57 0 1435 141 0 0 chr5 156527953 156528151 -46557381 + AluSg/x SINE Alu 101 298 -14 1604 163 83 18 chr5 156528333 156528609 -46556923 + AluJb SINE Alu 1 294 -18 399 279 122 7 chr5 156528972 156529119 -46556413 - MER5B DNA MER1_type -14 164 1 2191 84 7 0 chr5 156529758 156530033 -46555499 + AluSp SINE Alu 1 277 -36 433 0 17 17 chr5 156530036 156530094 -46555438 + (TAAA)n Simple_repeat Simple_repeat 1 58 0 2287 112 0 13 chr5 156530102 156530415 -46555117 + AluSx SINE Alu 1 309 -3 1178 120 12 0 chr5 156530415 156530582 -46554950 + AluSg/x SINE Alu 132 300 -10 2225 115 0 10 chr5 156530818 156531123 -46554409 + AluSg SINE Alu 1 302 -8 1789 174 3 0 chr5 156531679 156531972 -46553560 + AluJo SINE Alu 3 296 -16 400 244 32 65 chr5 156532371 156532494 -46553038 - MIR SINE MIR -55 153 35 1020 91 23 0 chr5 156532820 156532952 -46552580 + AluY SINE Alu 1 135 -176 1292 163 21 24 chr5 156532952 156533241 -46552291 + AluY SINE Alu 1 288 -23 353 299 116 0 chr5 156533446 156533593 -46551939 - L2 LINE L2 -1284 2030 1867 2319 88 3 10 chr5 156533609 156533915 -46551617 - AluY SINE Alu -7 304 1 227 151 0 75 chr5 156533917 156533970 -46551562 + MLT1L LTR MaLR 7 55 -560 482 117 0 0 chr5 156533970 156534047 -46551485 - MER9 LTR ERVK 0 511 435 2439 63 0 22 chr5 156534054 156534371 -46551161 + AluY SINE Alu 1 310 -1 1328 99 0 0 chr5 156534375 156534547 -46550985 + AluSg/x SINE Alu 129 300 -12 41 36 0 0 chr5 156535656 156535711 -46549821 + AT_rich Low_complexity Low_complexity 1 55 0 910 113 57 6 chr5 156536243 156536420 -46549112 - L1MA7 LINE L1 0 6291 6106 1717 168 18 11 chr5 156536420 156536706 -46548826 + AluJo SINE Alu 1 288 -24 379 202 106 29 chr5 156536986 156537090 -46548442 + L2 LINE L2 3197 3308 -5 1927 114 0 18 chr5 156537706 156537978 -46547554 - AluSg SINE Alu -22 288 22 2332 91 7 0 chr5 156537978 156538274 -46547258 - AluSg SINE Alu -12 298 1 287 217 12 36 chr5 156538408 156538491 -46547041 - MER3 DNA MER1_type -128 81 1 1095 198 132 7 chr5 156538499 156538802 -46546730 - MER58B DNA MER1_type 0 341 1 1109 166 26 105 chr5 156539495 156539808 -46545724 - AluJb SINE Alu -14 288 1 2074 101 46 33 chr5 156539817 156540124 -46545408 - AluSx SINE Alu -1 311 1 1659 126 83 3 chr5 156540993 156541294 -46544238 - L1MC3 LINE L1 -16 7769 7445 1128 103 23 29 chr5 156541294 156541468 -46544064 - AluSg/x SINE Alu -4 306 134 224 213 106 0 chr5 156542151 156542198 -46543334 - L2 LINE L2 -49 3223 3172 1873 123 44 20 chr5 156542803 156543096 -46542436 + AluSx SINE Alu 1 300 -12 1087 140 0 0 chr5 156544007 156544157 -46541375 + AluSp SINE Alu 145 294 -19 1096 179 196 1 chr5 156544157 156544562 -46540970 + L1M2c LINE L1 1791 2198 -4521 736 150 26 0 chr5 156544834 156544947 -46540585 - FLAM_C SINE Alu -25 118 3 22 0 0 0 chr5 156544949 156544971 -46540561 + AT_rich Low_complexity Low_complexity 1 22 0 250 314 0 34 chr5 156545044 156545162 -46540370 + AluSq/x SINE Alu 10 123 -179 2142 105 31 7 chr5 156545859 156546153 -46539379 + AluSp SINE Alu 1 301 -12 27 29 0 0 chr5 156548997 156549031 -46536501 + AT_rich Low_complexity Low_complexity 1 34 0 2303 90 16 13 chr5 156552420 156552731 -46532801 - AluSp SINE Alu -1 312 1 2293 105 3 6 chr5 156553390 156553703 -46531829 - AluSx SINE Alu 0 312 1 377 203 19 11 chr5 156553755 156554032 -46531500 - AluJb SINE Alu 0 314 1 2156 121 16 0 chr5 156554280 156554586 -46530946 - AluSq SINE Alu -2 311 1 180 0 0 0 chr5 156554660 156554680 -46530852 + (T)n Simple_repeat Simple_repeat 1 20 0 348 214 0 34 chr5 156554974 156555063 -46530469 - MIR SINE MIR -14 248 163 2073 146 13 0 chr5 156555543 156555851 -46529681 - AluSx SINE Alu 0 312 1 2127 134 3 0 chr5 156557874 156558179 -46527353 - AluSq SINE Alu -7 306 1 1722 176 17 10 chr5 156558184 156558480 -46527052 - AluSx SINE Alu -14 298 1 2277 96 0 19 chr5 156559754 156560068 -46525464 - AluSx SINE Alu -4 308 1 1834 134 29 26 chr5 156560072 156560379 -46525153 - AluSc SINE Alu -1 308 1 824 145 7 14 chr5 156560754 156560892 -46524640 + AluJo SINE Alu 1 137 -175 1947 118 24 10 chr5 156561201 156561490 -46524042 + AluSx SINE Alu 1 293 -19 252 0 0 0 chr5 156561495 156561523 -46524009 + (T)n Simple_repeat Simple_repeat 1 28 0 186 103 0 0 chr5 156561568 156561597 -46523935 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2193 92 3 3 chr5 156561661 156561953 -46523579 + AluY SINE Alu 1 292 -19 1116 215 60 32 chr5 156561963 156562247 -46523285 + AluJo SINE Alu 1 292 -10 2078 77 22 48 chr5 156562378 156562689 -46522843 - AluY SINE Alu -8 303 1 1908 155 0 13 chr5 156562779 156563088 -46522444 - AluSx SINE Alu -7 305 1 1728 179 3 3 chr5 156563135 156563431 -46522101 + AluJo SINE Alu 1 296 -16 1846 116 69 4 chr5 156565263 156565538 -46519994 + AluSx SINE Alu 4 296 -16 557 293 120 5 chr5 156565709 156565917 -46519615 - MIR SINE MIR 0 262 31 2144 112 10 10 chr5 156565925 156566228 -46519304 - AluSx SINE Alu -9 303 1 2468 41 0 7 chr5 156566544 156566838 -46518694 + AluY SINE Alu 1 292 -19 2301 109 6 13 chr5 156568046 156568359 -46517173 - AluSq SINE Alu -2 311 1 23 0 0 0 chr5 156568572 156568595 -46516937 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 156568939 156568960 -46516572 + AT_rich Low_complexity Low_complexity 1 21 0 2091 117 10 3 chr5 156569057 156569355 -46516177 - AluSp SINE Alu -13 300 1 2255 108 3 3 chr5 156569490 156569796 -46515736 - AluSq SINE Alu -7 306 1 23 0 0 0 chr5 156569806 156569829 -46515703 + AT_rich Low_complexity Low_complexity 1 23 0 601 227 111 30 chr5 156570127 156570325 -46515207 + MER58A DNA MER1_type 1 214 -10 2108 119 3 10 chr5 156570354 156570657 -46514875 + AluSq SINE Alu 1 301 -12 1693 189 24 0 chr5 156572434 156572725 -46512807 - AluJb SINE Alu -14 298 1 1375 152 186 4 chr5 156573503 156573766 -46511766 - AluSx SINE Alu -1 311 1 2224 83 7 0 chr5 156574342 156574630 -46510902 + AluY SINE Alu 1 290 -21 394 278 96 0 chr5 156574632 156574747 -46510785 - MER5A DNA MER1_type -5 184 59 245 220 34 0 chr5 156574751 156574810 -46510722 - 7SK RNA RNA -10 183 123 360 183 0 0 chr5 156574857 156574928 -46510604 - 7SK RNA RNA -71 122 52 658 84 134 0 chr5 156574928 156575047 -46510485 - AluSq/x SINE Alu -177 135 1 261 246 98 0 chr5 156575049 156575110 -46510422 - MER5A DNA MER1_type -117 72 6 1408 134 191 0 chr5 156575723 156575969 -46509563 - AluSq SINE Alu -6 297 5 1755 172 10 13 chr5 156576035 156576338 -46509194 - AluJb SINE Alu -10 302 1 2101 100 0 7 chr5 156576379 156576668 -46508864 + AluSg SINE Alu 7 293 -17 1086 130 13 0 chr5 156777095 156777249 -46308283 - AluSg/x SINE Alu -21 289 134 2160 90 19 35 chr5 156777251 156777562 -46307970 - AluSg SINE Alu 0 310 5 1847 158 0 11 chr5 156777566 156777874 -46307658 - AluSx SINE Alu 0 305 1 294 272 29 73 chr5 156777878 156777969 -46307563 - L1ME LINE L1 -382 5739 5654 2320 107 0 7 chr5 156777969 156778143 -46307389 - AluSp SINE Alu -6 307 134 2440 76 0 0 chr5 156778143 156778445 -46307087 - AluY SINE Alu -9 302 1 2320 107 0 7 chr5 156778445 156778579 -46306953 - AluSp SINE Alu -179 134 1 294 272 29 73 chr5 156778579 156778623 -46306909 - L1ME LINE L1 -467 5654 5610 2334 76 0 3 chr5 156778654 156778945 -46306587 + AluSg SINE Alu 5 294 -16 2373 97 0 0 chr5 156781070 156781368 -46304164 + AluSg SINE Alu 1 298 -12 1332 118 0 15 chr5 156782146 156782341 -46303191 + AluSg/x SINE Alu 121 312 0 935 224 6 0 chr5 156782345 156782510 -46303022 - FAM SINE Alu -9 166 1 358 164 58 115 chr5 156782511 156782615 -46302917 - L1ME LINE L1 -822 5324 5227 1265 158 14 31 chr5 156782615 156782631 -46302901 - AluJo SINE Alu 0 312 297 2138 131 3 13 chr5 156782631 156782945 -46302587 - AluSx SINE Alu 0 312 2 1265 158 14 31 chr5 156782945 156783150 -46302382 - AluJo SINE Alu -15 297 95 1607 209 9 64 chr5 156783152 156783228 -46302304 - L1ME LINE L1 -941 5205 5126 2147 109 3 0 chr5 156783228 156783536 -46301996 - AluSp SINE Alu 0 309 1 1607 209 9 64 chr5 156783536 156783831 -46301701 - L1ME LINE L1 -1020 5126 4858 2182 128 3 0 chr5 156783831 156784129 -46301403 + AluSx SINE Alu 1 299 -13 1607 209 9 64 chr5 156784129 156784195 -46301337 - L1ME LINE L1 -1288 4858 4790 1973 148 20 0 chr5 156784195 156784493 -46301039 - AluSx SINE Alu -8 304 1 1424 185 142 0 chr5 156784493 156784753 -46300779 - AluJb SINE Alu -5 297 1 920 114 43 29 chr5 156784801 156784975 -46300557 - AluSg/x SINE Alu 0 312 153 1762 133 82 34 chr5 156784979 156785118 -46300414 + AluSx SINE Alu 1 132 -180 2257 111 3 0 chr5 156785118 156785415 -46300117 + AluSp SINE Alu 3 300 -13 1762 133 82 34 chr5 156785415 156785568 -46299964 + AluSx SINE Alu 132 307 -5 798 143 23 23 chr5 156785575 156785708 -46299824 + FLAM_C SINE Alu 1 133 0 1574 199 17 19 chr5 156785708 156786125 -46299407 + MLT1F LTR MaLR 21 492 -50 319 302 81 68 chr5 156786181 156786344 -46299188 + L3 LINE CR1 792 951 -626 2260 120 3 0 chr5 156786344 156786645 -46298887 + AluSp SINE Alu 1 302 -11 2278 122 0 0 chr5 156786654 156786948 -46298584 + AluSx SINE Alu 1 294 -18 319 302 81 68 chr5 156786948 156787009 -46298523 + L3 LINE CR1 958 1029 -548 4873 63 118 124 chr5 156787109 156787940 -46297592 + LTR12 LTR ERV1 1 826 0 46553 83 7 11 chr5 156787953 156794401 -46291131 + HERV9 LTR ERV1 40 6456 -1943 7389 82 5 12 chr5 156794401 156795429 -46290103 + HERV9 LTR ERV1 7375 8395 -4 4776 66 111 123 chr5 156795433 156795543 -46289989 + LTR12 LTR ERV1 1 111 -715 2410 90 0 0 chr5 156795543 156795844 -46289688 - AluY SINE Alu -10 301 1 4776 66 111 123 chr5 156795844 156796569 -46288963 + LTR12 LTR ERV1 111 826 0 189 221 97 78 chr5 156796654 156796808 -46288724 + L2 LINE L2 199 355 -2959 352 284 106 21 chr5 156796917 156797058 -46288474 + L2 LINE L2 3160 3312 -1 186 189 0 0 chr5 156797058 156797095 -46288437 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 394 309 181 27 chr5 156797115 156797374 -46288158 + L3 LINE CR1 1250 1548 -29 2236 117 0 16 chr5 156797466 156797783 -46287749 - AluSx SINE Alu 0 312 1 225 227 216 11 chr5 156797911 156797999 -46287533 + L2 LINE L2 3167 3272 0 242 227 30 0 chr5 156798318 156798384 -46287148 - MIR SINE MIR -63 145 78 364 228 272 0 chr5 156798667 156798781 -46286751 + MIR SINE MIR 103 247 -15 2129 130 3 7 chr5 156798794 156799094 -46286438 + AluSx SINE Alu 1 299 -13 2396 77 0 26 chr5 156799095 156799407 -46286125 + AluSx SINE Alu 2 305 -7 203 138 0 0 chr5 156799416 156799445 -46286087 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 1728 56 5 23 chr5 156799447 156799661 -46285871 + AluSp SINE Alu 1 210 -103 2361 107 0 3 chr5 156800047 156800356 -46285176 + AluSq SINE Alu 1 308 -5 446 204 152 8 chr5 156800681 156800813 -46284719 - L2 LINE L2 0 3313 3163 2076 83 0 11 chr5 156800996 156801290 -46284242 - AluSq SINE Alu 0 313 23 258 294 101 18 chr5 156801336 156801445 -46284087 + MER5A DNA MER1_type 50 167 -22 * 400 260 10 19 chr5 156801358 156801462 -46284070 - MER5A DNA MER1_type -70 119 17 737 66 0 0 chr5 156801619 156801751 -46283781 + AluSg/x SINE Alu 189 320 0 244 312 119 0 chr5 156802627 156802736 -46282796 + MIR SINE MIR 70 191 -71 183 42 0 0 chr5 156802780 156802804 -46282728 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1386 177 39 12 chr5 156802821 156803075 -46282457 - AluJo SINE Alu -51 261 1 2393 92 0 3 chr5 156803412 156803715 -46281817 - AluSc SINE Alu -7 302 1 1573 142 83 12 chr5 156803926 156804179 -46281353 + AluJo SINE Alu 6 276 -36 2438 80 0 13 chr5 156804211 156804524 -46281008 + AluY SINE Alu 3 311 0 1752 157 10 13 chr5 156804632 156804932 -46280600 + AluSq SINE Alu 1 299 -14 2120 80 0 4 chr5 156804938 156805200 -46280332 + AluY SINE Alu 39 299 -12 1134 100 39 61 chr5 156805200 156805380 -46280152 + AluSp SINE Alu 134 309 -4 2079 104 66 0 chr5 156805849 156806136 -46279396 - AluSx SINE Alu -6 306 1 195 244 0 24 chr5 156806141 156806182 -46279350 - L2 LINE L2 -94 3178 3139 1212 59 0 0 chr5 156806729 156806865 -46278667 + AluSq/x SINE Alu 1 136 -177 2176 134 0 10 chr5 156806865 156807171 -46278361 + AluSq SINE Alu 1 303 -10 2071 101 80 0 chr5 156807171 156807457 -46278075 + AluSq SINE Alu 1 309 -4 345 150 117 0 chr5 156807457 156807517 -46278015 - LTR10A LTR ERV1 -542 67 1 249 157 20 20 chr5 156807539 156807590 -46277942 - LTR10B LTR ERV1 -496 51 1 447 308 0 0 chr5 156807590 156807710 -46277822 - MIR SINE MIR -82 180 61 193 312 119 9 chr5 156808191 156808351 -46277181 + MIR SINE MIR 48 262 0 310 299 97 26 chr5 156808954 156809108 -46276424 + L3b LINE CR1 1302 1466 -117 594 270 18 12 chr5 156809126 156809289 -46276243 - MIR SINE MIR -51 211 48 207 265 29 44 chr5 156809671 156809739 -46275793 - MIR3 SINE MIR -38 170 104 1456 143 9 13 chr5 156809800 156810031 -46275501 + AluSx SINE Alu 1 230 -82 3609 36 20 2 chr5 156810032 156810479 -46275053 + LTR2B LTR ERV1 1 455 -35 3248 85 22 39 chr5 156810579 156811086 -46274446 + Harlequin LTR ERV1 396 893 -6003 2706 90 43 6 chr5 156811079 156811547 -46273985 + Harlequin LTR ERV1 1572 2056 -4840 * 4212 56 28 2 chr5 156811540 156812079 -46273453 + Harlequin LTR ERV1 3407 3959 -2937 * 16605 145 8 14 chr5 156812073 156814810 -46270722 + Harlequin LTR ERV1 4175 6896 0 4108 46 17 0 chr5 156814811 156815293 -46270239 + LTR2B LTR ERV1 1 490 0 421 143 11 77 chr5 156815293 156815384 -46270148 + AluJ/FRAM SINE Alu 228 312 0 1545 172 0 82 chr5 156815408 156815711 -46269821 + AluJb SINE Alu 1 278 -34 402 331 53 30 chr5 156815778 156815892 -46269640 + L1ME LINE L1 5529 5622 -499 2006 128 0 38 chr5 156815892 156816074 -46269458 - AluSx SINE Alu -5 307 141 2467 88 0 0 chr5 156816074 156816379 -46269153 - AluY SINE Alu -6 305 1 2006 128 0 38 chr5 156816379 156816515 -46269017 - AluSx SINE Alu -171 141 1 402 331 53 30 chr5 156816515 156816548 -46268984 + L1ME LINE L1 5622 5653 -468 2412 81 0 3 chr5 156816553 156816851 -46268681 + AluSx SINE Alu 1 297 -15 481 132 15 0 chr5 156816931 156816999 -46268533 - AluSg/x SINE Alu -30 282 214 328 134 15 15 chr5 156817008 156817075 -46268457 + L1MB8 LINE L1 6101 6167 -11 2137 88 7 7 chr5 156817097 156817411 -46268121 + AluSq SINE Alu 1 314 0 1894 101 3 56 chr5 156817552 156817700 -46267832 - AluSx SINE Alu -39 273 119 1900 105 4 0 chr5 156817700 156817995 -46267537 - AluSp SINE Alu 0 330 35 1895 135 31 3 chr5 156817997 156818285 -46267247 - AluSx SINE Alu -15 297 2 1894 101 3 56 chr5 156818285 156818420 -46267112 - AluSx SINE Alu -194 118 1 497 189 35 99 chr5 156818471 156818528 -46267004 - L1MC5 LINE L1 -263 7698 7639 2502 68 0 13 chr5 156818528 156818838 -46266694 + AluY SINE Alu 1 306 -5 497 189 35 99 chr5 156818838 156818981 -46266551 - L1MC5 LINE L1 -322 7639 7511 706 143 0 0 chr5 156818982 156819101 -46266431 - L1MB8 LINE L1 -1 6177 6059 324 119 34 0 chr5 156819107 156819166 -46266366 - Alu SINE Alu -1 299 239 861 111 0 0 chr5 156819176 156819284 -46266248 - AluSq/x SINE Alu -205 108 1 2501 76 0 0 chr5 156819313 156819614 -46265918 + AluY SINE Alu 1 301 -10 219 36 0 0 chr5 156819648 156819676 -46265856 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 552 149 11 11 chr5 156819680 156819767 -46265765 - AluSx SINE Alu -30 279 193 993 145 0 0 chr5 156819775 156819913 -46265619 - AluSx SINE Alu -173 139 2 1173 151 65 6 chr5 156819932 156820184 -46265348 + L1MB3 LINE L1 5672 5932 -251 2244 89 14 7 chr5 156820221 156820514 -46265018 + AluSp SINE Alu 3 297 -16 1664 200 92 45 chr5 156820542 156820664 -46264868 + L1MD2 LINE L1 5767 5882 -477 2393 83 0 0 chr5 156820664 156820953 -46264579 - AluSg SINE Alu -21 289 1 1664 200 92 45 chr5 156820953 156821228 -46264304 + L1MD2 LINE L1 5882 6143 -216 2150 104 0 17 chr5 156821228 156821525 -46264007 - AluSx SINE Alu -18 294 3 1664 200 92 45 chr5 156821525 156821561 -46263971 + L1MD2 LINE L1 6143 6176 -183 2256 97 3 0 chr5 156821561 156821849 -46263683 - AluSq SINE Alu -24 289 1 1664 200 92 45 chr5 156821849 156821970 -46263562 + L1MD2 LINE L1 6176 6349 -10 1499 102 20 0 chr5 156822002 156822199 -46263333 + AluY SINE Alu 104 304 -7 2299 91 3 10 chr5 156822339 156822636 -46262896 + AluSq SINE Alu 1 295 -18 2142 145 0 0 chr5 156822646 156822943 -46262589 + AluSx SINE Alu 1 297 -15 2457 89 0 0 chr5 156822950 156823252 -46262280 + AluSg SINE Alu 1 302 -8 511 234 32 0 chr5 156823262 156823386 -46262146 + FLAM_A SINE Alu 4 131 -2 1024 105 0 0 chr5 156823402 156823535 -46261997 + AluSq/x SINE Alu 3 135 -177 2206 114 3 0 chr5 156823535 156823833 -46261699 + AluSx SINE Alu 1 299 -13 573 126 11 11 chr5 156823995 156824103 -46261429 - AluSx SINE Alu 0 301 194 1009 130 0 0 chr5 156824111 156824249 -46261283 - AluSx SINE Alu -173 139 2 1033 118 75 0 chr5 156824290 156824476 -46261056 + L1MB3 LINE L1 5689 5888 -295 2353 85 7 0 chr5 156824530 156824823 -46260709 - AluSg SINE Alu -14 296 2 735 165 63 0 chr5 156825788 156825915 -46259617 - FLAM_C SINE Alu 0 143 9 2226 100 3 10 chr5 156825917 156826217 -46259315 - AluSq SINE Alu -15 298 1 225 0 0 0 chr5 156826235 156826260 -46259272 + (CA)n Simple_repeat Simple_repeat 1 25 0 251 177 63 13 chr5 156826290 156826369 -46259163 - L1ME3 LINE L1 -3 6159 6077 2357 79 7 13 chr5 156826403 156826706 -46258826 - AluSc SINE Alu -8 301 1 377 264 63 86 chr5 156826706 156826863 -46258669 - L1MC4a LINE L1 -1923 5885 5731 625 206 15 30 chr5 156826863 156826994 -46258538 - FLAM_A SINE Alu -4 129 1 377 264 63 86 chr5 156826994 156827010 -46258522 - L1MC4a LINE L1 -2077 5731 5716 2215 117 3 3 chr5 156827044 156827351 -46258181 - AluSg1 SINE Alu -2 307 1 2258 114 0 10 chr5 156827355 156827654 -46257878 - AluSx SINE Alu -16 296 1 2216 112 13 0 chr5 156827664 156827969 -46257563 - AluSq SINE Alu -4 309 1 1066 113 0 7 chr5 156827969 156828111 -46257421 - AluSg SINE Alu -169 141 1 2047 144 0 10 chr5 156828115 156828413 -46257119 - AluSx SINE Alu -17 295 1 583 77 11 11 chr5 156828419 156828510 -46257022 + (TTCC)n Simple_repeat Simple_repeat 2 92 0 * 1024 137 6 39 chr5 156828507 156828518 -46257014 - AluSg/x SINE Alu -2 307 297 1294 151 9 111 chr5 156828518 156828636 -46256896 - AluSc SINE Alu 0 299 171 2344 55 0 3 chr5 156828636 156828927 -46256605 + AluY SINE Alu 1 290 -21 1294 151 9 111 chr5 156828927 156829140 -46256392 - AluSc SINE Alu -128 171 2 1024 137 6 39 chr5 156829140 156829310 -46256222 - AluSg/x SINE Alu -12 297 132 2304 96 0 0 chr5 156829310 156829622 -46255910 - AluSx SINE Alu 0 312 1 1087 147 0 6 chr5 156829645 156829845 -46255687 + FRAM SINE Alu 1 199 0 216 97 0 0 chr5 156830234 156830265 -46255267 + (CAT)n Simple_repeat Simple_repeat 2 32 0 521 260 128 29 chr5 156830265 156830469 -46255063 - MIR SINE MIR -11 251 28 2182 96 3 3 chr5 156830472 156830775 -46254757 - AluSg SINE Alu -7 303 1 8487 137 42 91 chr5 156830797 156832582 -46252950 + pTR5 LTR ERV1 741 2437 -1 1901 132 0 14 chr5 156832707 156832994 -46252538 + AluSq SINE Alu 17 299 -14 444 321 42 51 chr5 156833253 156833468 -46252064 - L2 LINE L2 -52 3220 3008 2117 105 0 16 chr5 156833792 156834096 -46251436 - AluSx SINE Alu -13 299 1 2230 91 0 16 chr5 156834124 156834304 -46251228 - AluSp SINE Alu 0 313 139 2363 82 3 0 chr5 156834304 156834610 -46250922 - AluSp SINE Alu -6 307 1 2230 91 0 16 chr5 156834610 156834747 -46250785 - AluSp SINE Alu -174 139 1 2168 105 0 10 chr5 156835402 156835708 -46249824 - AluSx SINE Alu -9 303 1 413 214 8 11 chr5 156835711 156835816 -46249716 - L1ME2 LINE L1 -58 6263 6018 726 162 0 0 chr5 156835849 156835960 -46249572 - FLAM_A SINE Alu -30 112 2 2423 199 48 35 chr5 156835981 156836530 -46249002 - L1ME2 LINE L1 -164 6000 5441 669 140 0 0 chr5 156836530 156836630 -46248902 - HY3 scRNA scRNA -1 100 1 2423 199 48 35 chr5 156836630 156836658 -46248874 - L1ME2 LINE L1 -723 5441 5415 2017 131 16 0 chr5 156836663 156836969 -46248563 - AluJb SINE Alu -1 311 1 492 210 112 26 chr5 156837039 156837272 -46248260 + L1M4 LINE L1 2835 3087 -3059 2276 87 3 7 chr5 156837273 156837583 -46247949 + AluSc SINE Alu 1 309 0 2192 103 3 0 chr5 156837583 156837883 -46247649 + AluSp SINE Alu 1 301 -12 1148 113 16 21 chr5 156837884 156838070 -46247462 + AluSg/x SINE Alu 126 310 0 335 214 91 157 chr5 156838080 156838284 -46247248 + L1M4 LINE L1 3111 3339 -2807 226 179 0 36 chr5 156838284 156838340 -46247192 - MADE1 DNA Mariner 0 80 27 335 214 91 157 chr5 156838340 156838463 -46247069 + L1M4 LINE L1 3339 3468 -2678 2272 91 0 0 chr5 156838464 156838761 -46246771 - AluSg SINE Alu -13 297 1 1801 97 11 15 chr5 156838764 156839032 -46246500 - AluSq SINE Alu -15 298 32 343 192 0 111 chr5 156839033 156839094 -46246438 + L1M4 LINE L1 3652 3700 -2446 1983 119 7 3 chr5 156839094 156839397 -46246135 + AluSx SINE Alu 1 304 -8 343 192 0 111 chr5 156839397 156839434 -46246098 + L1M4 LINE L1 3700 3739 -2407 272 263 38 0 chr5 156839423 156839503 -46246029 + L1ME4a LINE L1 5601 5683 -438 * 842 176 64 11 chr5 156839548 156839735 -46245797 + AluJo SINE Alu 105 301 -11 710 246 85 29 chr5 156839754 156839909 -46245623 + L1ME4a LINE L1 5692 5837 -284 2400 62 0 3 chr5 156839909 156840216 -46245316 - AluY SINE Alu -5 306 1 710 246 85 29 chr5 156840216 156840402 -46245130 + L1ME4a LINE L1 5837 6052 -69 1468 186 7 7 chr5 156840438 156840712 -46244820 - AluJb SINE Alu -21 291 18 2293 63 3 3 chr5 156840773 156841073 -46244459 + AluY SINE Alu 1 300 -11 432 303 0 8 chr5 156841266 156841385 -46244147 + MIR3 SINE MIR 64 181 -27 2136 86 7 10 chr5 156841664 156841828 -46243704 - AluSq SINE Alu -13 300 136 2139 88 7 0 chr5 156841828 156842124 -46243408 - AluSg SINE Alu -12 298 1 2136 86 7 10 chr5 156842124 156842260 -46243272 - AluSq SINE Alu -177 136 1 24 53 0 0 chr5 156842966 156843004 -46242528 + GC_rich Low_complexity Low_complexity 1 38 0 207 114 0 0 chr5 156843163 156843198 -46242334 + (CGG)n Simple_repeat Simple_repeat 1 35 0 230 179 15 60 chr5 156843349 156843416 -46242116 + C-rich Low_complexity Low_complexity 2 65 0 676 166 14 36 chr5 156844572 156844711 -46240821 - BC200 scRNA scRNA -64 136 1 2236 57 3 10 chr5 156845280 156845576 -46239956 + AluY SINE Alu 2 295 -16 1952 128 0 3 chr5 156845791 156846080 -46239452 - AluSg SINE Alu -22 288 1 2069 102 3 3 chr5 156846085 156846380 -46239152 - AluSx SINE Alu -17 295 1 1918 123 33 3 chr5 156847644 156847945 -46237587 - AluSx SINE Alu -2 310 1 1648 156 0 4 chr5 156848010 156848306 -46237226 + AluJb SINE Alu 7 301 0 591 249 80 55 chr5 156848313 156848514 -46237018 - MER102a DNA MER1_type -9 321 116 2246 96 0 0 chr5 156848709 156849010 -46236522 - AluSg SINE Alu -9 301 1 508 127 0 0 chr5 156849059 156849130 -46236402 - AluS SINE Alu -241 72 2 2267 95 0 0 chr5 156849142 156849447 -46236085 - AluSx SINE Alu -7 305 1 2174 88 7 7 chr5 156849673 156849968 -46235564 + AluSx SINE Alu 1 295 -17 2185 105 7 0 chr5 156849991 156850297 -46235235 + AluY SINE Alu 1 308 -3 2139 112 0 0 chr5 156850304 156850599 -46234933 + AluSg1 SINE Alu 1 295 -14 1451 158 17 61 chr5 156851589 156851912 -46233620 + AluJb SINE Alu 1 310 0 1325 128 179 20 chr5 156851958 156852121 -46233411 - AluSg SINE Alu -8 292 156 1751 120 0 0 chr5 156852121 156852379 -46233153 - AluY SINE Alu -8 303 46 1325 128 179 20 chr5 156852379 156852466 -46233066 - AluSg SINE Alu -144 156 2 509 71 14 0 chr5 156852511 156852581 -46232951 - MER41A LTR ERV1 -88 466 396 2238 91 0 0 chr5 156852747 156853043 -46232489 + AluSg SINE Alu 6 301 -9 297 310 131 21 chr5 156853090 156853235 -46232297 - MIR SINE MIR -71 191 31 381 222 0 0 chr5 156853335 156853434 -46232098 + CT-rich Low_complexity Low_complexity 2 100 0 191 322 77 56 chr5 156853672 156853815 -46231717 + L2 LINE L2 1866 2011 -1303 1768 158 14 3 chr5 156853932 156854224 -46231308 + AluJo SINE Alu 1 295 -17 1808 132 24 20 chr5 156854261 156854557 -46230975 - AluSx SINE Alu -11 301 5 25 31 0 0 chr5 156854570 156854602 -46230930 + AT_rich Low_complexity Low_complexity 1 32 0 2383 75 0 3 chr5 156854637 156854943 -46230589 + AluY SINE Alu 1 305 -6 2138 73 7 14 chr5 156855305 156855616 -46229916 + AluY SINE Alu 1 311 0 397 88 0 0 chr5 156855696 156855753 -46229779 - AluSp/q SINE Alu -1 302 246 1189 92 6 0 chr5 156855756 156855920 -46229612 + AluSq SINE Alu 141 305 -8 192 77 0 0 chr5 156856353 156856379 -46229153 + (A)n Simple_repeat Simple_repeat 1 26 0 355 220 100 40 chr5 156856398 156856498 -46229034 + MIR SINE MIR 84 189 -73 507 248 7 27 chr5 156856554 156856703 -46228829 + L1ME1 LINE L1 5689 5834 -332 426 198 135 0 chr5 156856800 156856896 -46228636 + LTR41 LTR ERVL 59 167 -606 1445 166 35 18 chr5 156857359 156857643 -46227889 + AluJo SINE Alu 1 289 -23 1042 232 85 12 chr5 156857774 156858104 -46227428 - MLT1C LTR MaLR 0 467 128 1184 98 6 0 chr5 156858117 156858281 -46227251 - AluY SINE Alu -146 165 1 210 154 0 0 chr5 156858558 156858597 -46226935 + T-rich Low_complexity Low_complexity 1 39 0 2176 106 0 3 chr5 156859017 156859319 -46226213 - AluSq SINE Alu -6 307 7 1555 190 27 14 chr5 156860031 156860046 -46225486 - AluJb SINE Alu -2 300 287 315 0 0 0 chr5 156860046 156860081 -46225451 + (TG)n Simple_repeat Simple_repeat 2 36 0 1555 190 27 14 chr5 156860081 156860360 -46225172 - AluJb SINE Alu -15 287 2 475 189 107 33 chr5 156860434 156860556 -46224976 - MER104 DNA Tc2 0 180 50 1821 132 0 36 chr5 156860561 156860746 -46224786 - AluSx SINE Alu 0 312 148 2145 103 3 10 chr5 156860746 156861058 -46224474 - AluSp SINE Alu -3 310 1 1821 132 0 36 chr5 156861058 156861201 -46224331 - AluSx SINE Alu -164 148 1 270 268 0 0 chr5 156861268 156861324 -46224208 - L2 LINE L2 -9 3263 3208 2168 74 7 10 chr5 156861381 156861679 -46223853 + AluSg SINE Alu 5 301 -9 991 172 20 119 chr5 156861696 156861720 -46223812 + AluJo SINE Alu 14 39 -273 1316 172 114 8 chr5 156861720 156861982 -46223550 - AluJb SINE Alu -22 290 1 991 172 20 119 chr5 156861982 156862083 -46223449 + AluJo SINE Alu 39 148 -164 1910 93 57 7 chr5 156862083 156862362 -46223170 - AluSc SINE Alu -16 293 1 991 172 20 119 chr5 156862362 156862537 -46222995 + AluJo SINE Alu 148 285 -27 181 193 193 34 chr5 156862643 156862731 -46222801 - L2 LINE L2 -259 3054 2953 2250 75 0 7 chr5 156862784 156863077 -46222455 + AluSg SINE Alu 1 291 -19 1164 98 5 62 chr5 156863081 156863275 -46222257 - MER46B DNA MER2_type -1 235 53 2007 108 0 0 chr5 156863278 156863579 -46221953 - AluSg SINE Alu 0 306 6 1033 162 72 65 chr5 156863584 156863874 -46221658 - AluJo SINE Alu 0 312 21 621 168 0 0 chr5 156863883 156863984 -46221548 - AluSx SINE Alu -15 295 195 1059 97 7 0 chr5 156863984 156864128 -46221404 - AluSx SINE Alu -168 145 1 773 204 7 13 chr5 156864128 156864280 -46221252 - MER46B DNA MER2_type -179 57 32 2409 69 0 0 chr5 156864284 156864588 -46220944 - AluY SINE Alu -7 304 1 2096 128 0 0 chr5 156864588 156864892 -46220640 - AluSx SINE Alu -7 305 1 904 99 59 89 chr5 156864892 156865094 -46220438 + L1MA8 LINE L1 6093 6288 -3 2127 115 0 0 chr5 156865097 156865392 -46220140 + AluSx SINE Alu 1 295 -17 2706 128 103 56 chr5 156865459 156866031 -46219501 + MER7C DNA MER2_type 3 601 -1 2273 83 3 3 chr5 156866145 156866458 -46219074 - AluSq SINE Alu 0 313 1 2128 107 3 0 chr5 156866527 156866827 -46218705 - AluSp SINE Alu -12 301 1 1550 162 6 60 chr5 156866838 156867152 -46218380 - AluJo SINE Alu -15 297 1 1013 81 0 0 chr5 156867454 156867590 -46217942 + AluSc SINE Alu 174 309 0 21 0 0 0 chr5 156867814 156867835 -46217697 + AT_rich Low_complexity Low_complexity 1 21 0 2391 64 0 0 chr5 156868109 156868404 -46217128 + AluY SINE Alu 1 295 -16 1310 154 32 29 chr5 156868550 156868603 -46216929 - AluJo SINE Alu -24 288 237 5619 66 49 25 chr5 156868603 156869028 -46216504 - LTR17 LTR ERV1 0 780 328 2103 82 24 0 chr5 156869028 156869320 -46216212 + AluY SINE Alu 5 303 -8 5619 66 49 25 chr5 156869320 156869655 -46215877 - LTR17 LTR ERV1 -452 328 2 1310 154 32 29 chr5 156869655 156869847 -46215685 - AluJo SINE Alu -75 237 42 270 0 0 0 chr5 156869876 156869906 -46215626 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1267 112 5 48 chr5 156869910 156870116 -46215416 - AluSg/x SINE Alu -31 279 83 1558 117 35 98 chr5 156870400 156870716 -46214816 - AluJo SINE Alu -16 296 1 900 166 0 0 chr5 156870755 156870900 -46214632 + FRAM SINE Alu 18 162 -14 1720 138 47 4 chr5 156870904 156871179 -46214353 + AluSx SINE Alu 3 289 -23 2241 85 0 3 chr5 156871415 156871710 -46213822 - AluY SINE Alu -17 294 1 976 97 0 0 chr5 156871863 156871997 -46213535 + AluSq SINE Alu 85 218 -95 1962 50 16 12 chr5 156872097 156872355 -46213177 - AluY SINE Alu -52 259 1 22 35 0 0 chr5 156872380 156872409 -46213123 + AT_rich Low_complexity Low_complexity 1 29 0 2083 118 0 22 chr5 156872575 156872890 -46212642 + AluSx SINE Alu 1 308 -4 1946 133 0 7 chr5 156872949 156873257 -46212275 + AluSx SINE Alu 3 308 -4 2256 78 17 0 chr5 156873614 156873907 -46211625 + AluY SINE Alu 1 298 -13 1326 181 69 10 chr5 156874426 156874714 -46210818 + L1ME1 LINE L1 5836 6140 -26 2211 70 6 29 chr5 156874730 156875045 -46210487 - AluY SINE Alu -3 308 1 198 0 0 0 chr5 156875045 156875067 -46210465 + (TTA)n Simple_repeat Simple_repeat 2 23 0 785 136 0 8 chr5 156875074 156875192 -46210340 - FLAM_C SINE Alu -16 117 1 2056 101 0 0 chr5 156875219 156875497 -46210035 + AluSg SINE Alu 1 278 -32 2318 88 0 0 chr5 156875620 156875928 -46209604 + AluSg SINE Alu 2 309 -1 1725 103 4 0 chr5 156876188 156876430 -46209102 + AluSq SINE Alu 56 298 -15 1824 169 39 0 chr5 156876702 156877010 -46208522 - MER2 DNA MER2_type -25 320 1 1991 121 13 19 chr5 156877097 156877411 -46208121 + AluSx SINE Alu 1 312 0 1554 163 35 28 chr5 156877895 156878184 -46207348 + AluJo SINE Alu 1 291 -21 259 295 23 0 chr5 156878219 156878348 -46207184 + (TA)n Simple_repeat Simple_repeat 1 132 0 2211 110 0 0 chr5 156878517 156878826 -46206706 + AluSg SINE Alu 1 309 -1 2190 101 0 3 chr5 156878908 156879214 -46206318 + AluY SINE Alu 1 305 -6 663 231 59 12 chr5 156879247 156879416 -46206116 + MER5A DNA MER1_type 1 177 -12 2109 118 0 6 chr5 156879579 156879893 -46205639 - AluSx SINE Alu 0 312 1 2170 116 6 0 chr5 156880391 156880702 -46204830 + AluSp SINE Alu 1 313 0 2170 105 3 10 chr5 156880714 156881028 -46204504 + AluSx SINE Alu 1 312 0 320 276 39 94 chr5 156881219 156881346 -46204186 - L1ME3 LINE L1 -216 5946 5830 1608 110 0 0 chr5 156881346 156881574 -46203958 - AluSg/x SINE Alu 0 310 83 320 276 39 94 chr5 156881574 156881627 -46203905 - L1ME3 LINE L1 -332 5830 5776 2307 78 0 0 chr5 156881727 156882021 -46203511 + AluY SINE Alu 1 294 -17 1720 138 47 4 chr5 156882257 156882532 -46203000 - AluSx SINE Alu -23 289 3 900 166 0 0 chr5 156882536 156882681 -46202851 - FRAM SINE Alu -14 162 18 1558 117 35 98 chr5 156882720 156883036 -46202496 + AluJo SINE Alu 1 296 -16 1283 107 5 48 chr5 156883320 156883526 -46202006 + AluSg/x SINE Alu 85 281 -31 237 33 0 0 chr5 156883530 156883560 -46201972 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1310 154 32 29 chr5 156883589 156883781 -46201751 + AluJo SINE Alu 42 237 -75 5633 64 49 25 chr5 156883781 156884116 -46201416 + LTR17 LTR ERV1 2 328 -452 2103 82 24 0 chr5 156884116 156884408 -46201124 - AluY SINE Alu -8 303 5 5633 64 49 25 chr5 156884408 156884833 -46200699 + LTR17 LTR ERV1 328 780 0 1310 154 32 29 chr5 156884833 156884886 -46200646 + AluJo SINE Alu 237 288 -24 2391 64 0 0 chr5 156885031 156885326 -46200206 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 156885600 156885621 -46199911 + AT_rich Low_complexity Low_complexity 1 21 0 1006 82 0 0 chr5 156885845 156885980 -46199552 - AluSc SINE Alu -1 308 174 1604 164 0 60 chr5 156886282 156886599 -46198933 + AluJo SINE Alu 1 298 -14 2056 118 3 6 chr5 156886610 156886924 -46198608 + AluSp SINE Alu 1 313 0 2013 114 24 3 chr5 156886962 156887260 -46198272 - AluSx SINE Alu -8 304 1 2053 119 0 7 chr5 156887963 156888265 -46197267 - AluSx SINE Alu -12 300 1 1591 178 0 33 chr5 156888484 156888788 -46196744 + AluJb SINE Alu 1 294 -18 1980 120 3 10 chr5 156888795 156889096 -46196436 + AluSg1 SINE Alu 5 303 -6 2080 123 0 0 chr5 156889205 156889514 -46196018 - AluSx SINE Alu -3 309 1 1747 156 7 7 chr5 156889557 156889884 -46195648 + AluJb SINE Alu 1 312 0 207 352 0 11 chr5 156890068 156890156 -46195376 - MIR SINE MIR -19 243 157 1914 103 82 0 chr5 156890527 156890809 -46194723 + AluSg SINE Alu 1 305 -5 1808 94 6 72 chr5 156890809 156891128 -46194404 + AluSq SINE Alu 1 298 -15 926 167 67 23 chr5 156891135 156891304 -46194228 + L1M4 LINE L1 5107 5267 -911 2001 114 10 3 chr5 156891304 156891601 -46193931 - AluSx SINE Alu -13 299 1 926 167 67 23 chr5 156891601 156891761 -46193771 + L1M4 LINE L1 5267 5440 -738 1584 179 17 0 chr5 156891766 156892063 -46193469 + AluJo SINE Alu 1 302 -10 2544 55 0 0 chr5 156892474 156892783 -46192749 + AluY SINE Alu 1 309 -2 256 143 36 0 chr5 156892838 156892894 -46192638 + CT-rich Low_complexity Low_complexity 3 60 0 1402 171 31 44 chr5 156892913 156893206 -46192326 - AluJo SINE Alu -23 289 1 2114 85 0 3 chr5 156893320 156893626 -46191906 - AluSx SINE Alu 0 305 1 1993 116 3 3 chr5 156893974 156894267 -46191265 - AluSg SINE Alu -17 293 1 1699 155 0 36 chr5 156894893 156895196 -46190336 + AluJo SINE Alu 6 297 -15 1890 143 17 3 chr5 156895313 156895614 -46189918 + AluSx SINE Alu 1 305 -7 818 128 0 57 chr5 156895632 156895773 -46189759 + FLAM_C SINE Alu 1 133 0 2137 108 0 7 chr5 156895966 156896263 -46189269 + AluSx SINE Alu 1 295 -17 822 125 0 97 chr5 156896426 156896540 -46188992 + AluJo/FLAM SINE Alu 3 102 -200 2279 78 3 3 chr5 156896540 156896834 -46188698 - AluSp SINE Alu -19 294 1 822 125 0 97 chr5 156896834 156896863 -46188669 + AluJo/FLAM SINE Alu 102 132 -170 2220 103 0 3 chr5 156896881 156897234 -46188298 - AluSg SINE Alu 0 352 1 2252 83 3 0 chr5 156897424 156897713 -46187819 + AluSg SINE Alu 1 290 -20 1445 169 81 7 chr5 156897756 156898028 -46187504 + AluJb SINE Alu 3 294 -18 2304 97 0 3 chr5 156898339 156898650 -46186882 - AluSq SINE Alu -2 311 2 22 35 0 0 chr5 156899114 156899143 -46186389 + AT_rich Low_complexity Low_complexity 1 29 0 226 233 0 0 chr5 156899917 156899960 -46185572 + (TG)n Simple_repeat Simple_repeat 1 43 0 742 152 0 16 chr5 156899960 156900085 -46185447 - FLAM_A SINE Alu -2 140 18 1988 103 21 4 chr5 156900964 156901245 -46184287 + AluSx SINE Alu 17 302 -10 652 203 168 0 chr5 156901389 156901532 -46184000 - AluJb SINE Alu -10 302 136 200 324 79 22 chr5 156902303 156902366 -46183166 + L3 LINE CR1 1419 1477 -100 2280 77 0 3 chr5 156902366 156902663 -46182869 + AluY SINE Alu 1 296 -15 200 324 79 22 chr5 156902663 156902738 -46182794 + L3 LINE CR1 1477 1565 -12 2177 90 0 0 chr5 156902993 156903282 -46182250 - AluSg SINE Alu -6 304 16 273 359 14 0 chr5 156903525 156903667 -46181865 + L1ME LINE L1 5573 5716 -405 1923 152 0 3 chr5 156903748 156904044 -46181488 + AluSx SINE Alu 1 295 -17 1559 67 0 0 chr5 156904219 156904413 -46181119 - AluSq SINE Alu -7 306 113 551 321 64 0 chr5 156904505 156904692 -46180840 + MIR SINE MIR 2 200 -62 27 22 0 22 chr5 156904800 156904826 -46180706 + AT_rich Low_complexity Low_complexity 1 27 -17 2205 88 3 3 chr5 156904826 156905122 -46180410 - AluSp SINE Alu -17 296 1 27 22 0 22 chr5 156905122 156905140 -46180392 + AT_rich Low_complexity Low_complexity 27 44 0 1803 157 14 0 chr5 156905966 156906259 -46179273 + AluSx SINE Alu 1 297 -15 2580 109 48 31 chr5 156906360 156906431 -46179101 - MSTA LTR MaLR 0 428 360 2220 83 3 0 chr5 156906431 156906721 -46178811 + AluSp SINE Alu 2 292 -21 2580 109 48 31 chr5 156906721 156907070 -46178462 - MSTA LTR MaLR -68 360 1 1656 154 18 11 chr5 156907811 156908121 -46177411 + AluJb SINE Alu 1 312 0 1758 181 0 0 chr5 156908471 156908769 -46176763 - AluJo SINE Alu -12 300 3 264 288 44 88 chr5 156908862 156909022 -46176510 + MIR SINE MIR 52 204 -58 2065 108 0 19 chr5 156909077 156909391 -46176141 - AluSc SINE Alu -1 308 1 2280 65 0 23 chr5 156909457 156909767 -46175765 + AluY SINE Alu 1 303 -8 1283 152 0 5 chr5 156909773 156909983 -46175549 + AluSg SINE Alu 2 210 -100 366 75 57 0 chr5 156909983 156910036 -46175496 + AluSg/x SINE Alu 76 131 -169 189 0 0 0 chr5 156910038 156910059 -46175473 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1959 112 13 16 chr5 156910536 156910839 -46174693 - AluSx SINE Alu -6 306 5 246 233 0 0 chr5 156911166 156911226 -46174306 - FLAM SINE Alu 0 133 74 * 351 165 36 13 chr5 156911196 156911285 -46174247 - AluSp SINE Alu -112 191 137 1908 111 18 4 chr5 156911358 156911637 -46173895 + AluSg SINE Alu 1 283 -27 1216 148 0 171 chr5 156911915 156912267 -46173265 - AluJo SINE Alu -20 292 1 1052 182 0 0 chr5 156912293 156912463 -46173069 - AluJb SINE Alu -9 303 134 2051 126 3 0 chr5 156912463 156912757 -46172775 - AluSx SINE Alu -17 295 1 1791 168 3 3 chr5 156912916 156913226 -46172306 - AluJb SINE Alu -2 310 1 1564 174 9 41 chr5 156915525 156915842 -46169690 - AluJb SINE Alu -5 307 1 2255 90 3 0 chr5 156916889 156917190 -46168342 + AluSp SINE Alu 1 302 -11 2071 116 13 3 chr5 156917483 156917786 -46167746 - AluSx SINE Alu -6 306 1 339 205 8 34 chr5 156917901 156917963 -46167569 + CT-rich Low_complexity Low_complexity 2 61 -54 195 69 0 0 chr5 156917963 156917992 -46167540 + (CCTG)n Simple_repeat Simple_repeat 2 30 0 339 205 8 34 chr5 156917992 156918046 -46167486 + CT-rich Low_complexity Low_complexity 61 115 0 1000 180 0 0 chr5 156918072 156918250 -46167282 - FRAM SINE Alu -5 171 1 2141 79 7 23 chr5 156919840 156920143 -46165389 + AluSp SINE Alu 1 298 -15 181 259 19 19 chr5 156921978 156922032 -46163500 + MIR SINE MIR 91 144 -118 201 253 169 0 chr5 156922686 156922769 -46162763 - MIR SINE MIR -134 128 32 329 277 12 0 chr5 156923613 156923696 -46161836 - MIR SINE MIR -16 246 163 28 86 0 0 chr5 156924341 156924411 -46161121 + GC_rich Low_complexity Low_complexity 1 70 0 245 364 101 0 chr5 156925437 156925654 -46159878 + MIR SINE MIR 22 260 -2 445 142 149 3 chr5 156926509 156926658 -46158874 - MER20 DNA MER1_type -2 217 1 266 267 19 55 chr5 156929470 156929593 -46155939 + MIR SINE MIR 48 165 -43 181 337 36 12 chr5 156931580 156931663 -46153869 + MIR SINE MIR 178 262 0 391 294 206 0 chr5 156931865 156932025 -46153507 + MER91A DNA MER1_type 4 196 0 188 296 128 56 chr5 156932025 156932265 -46153267 - L2 LINE L2 -191 3081 2824 420 321 61 0 chr5 156932403 156932534 -46152998 + MIR SINE MIR 120 258 -4 186 271 21 0 chr5 156934659 156934707 -46150825 + MIR SINE MIR 105 153 -109 240 288 0 0 chr5 156935139 156935205 -46150327 + G-rich Low_complexity Low_complexity 1 66 0 271 217 24 12 chr5 156935262 156935345 -46150187 + (CGG)n Simple_repeat Simple_repeat 2 85 0 204 211 0 0 chr5 156935817 156935855 -46149677 + C-rich Low_complexity Low_complexity 5 42 0 270 56 0 0 chr5 156938293 156938329 -46147203 + (GGCTG)n Simple_repeat Simple_repeat 4 39 0 189 300 50 50 chr5 156938841 156938921 -46146611 - L2 LINE L2 0 3313 3234 390 57 0 0 chr5 156939078 156939131 -46146401 + (TG)n Simple_repeat Simple_repeat 1 53 0 476 332 23 51 chr5 156941194 156941450 -46144082 + MIR SINE MIR 13 261 -1 387 333 40 0 chr5 156941519 156941669 -46143863 + MIR SINE MIR 59 214 -48 2354 96 0 0 chr5 156943624 156943936 -46141596 - AluSx SINE Alu 0 312 1 286 269 19 144 chr5 156944000 156944160 -46141372 - MIR SINE MIR -29 233 94 231 284 11 53 chr5 156944183 156944278 -46141254 + L2 LINE L2 3171 3261 -11 255 339 59 8 chr5 156945228 156945346 -46140186 - MIR3 SINE MIR 0 208 85 22 35 0 0 chr5 156948066 156948095 -46137437 + GC_rich Low_complexity Low_complexity 1 29 0 378 326 14 7 chr5 156949653 156949794 -46135738 + MIR SINE MIR 25 166 -96 368 382 116 0 chr5 156950671 156950878 -46134654 - MIR SINE MIR -4 258 28 248 170 21 0 chr5 156951474 156951521 -46134011 + MIR SINE MIR 97 144 -64 478 334 16 55 chr5 156951650 156951873 -46133659 + MIR SINE MIR 4 219 -43 211 219 58 68 chr5 156952979 156953102 -46132430 - MIR SINE MIR -65 143 33 400 282 10 0 chr5 156953532 156953635 -46131897 + MIR SINE MIR 79 182 -80 215 206 279 15 chr5 156954377 156954445 -46131087 - MIR SINE MIR -61 147 62 182 133 0 0 chr5 156954653 156954683 -46130849 + MIR SINE MIR 112 141 -67 22 0 0 0 chr5 156955318 156955340 -46130192 + GC_rich Low_complexity Low_complexity 1 22 0 181 228 190 63 chr5 156955724 156955803 -46129729 + MIR SINE MIR 52 140 -68 908 223 84 9 chr5 156958769 156958984 -46126548 + MIR SINE MIR 16 246 -16 2243 73 0 0 chr5 156959003 156959312 -46126220 - AluSp SINE Alu 0 322 14 345 297 47 8 chr5 156959634 156959765 -46125767 - MIR SINE MIR -59 149 30 342 244 151 0 chr5 156960056 156960175 -46125357 + MIR SINE MIR 122 258 -4 2293 100 7 0 chr5 156960467 156960776 -46124756 + AluSx SINE Alu 1 311 -1 568 163 8 41 chr5 156961510 156961633 -46123899 + L1MB7 LINE L1 6066 6184 0 512 127 0 0 chr5 156961640 156961711 -46123821 + AluJ/FLAM SINE Alu 1 71 -241 180 97 0 0 chr5 156961734 156961765 -46123767 + (TAAAAA)n Simple_repeat Simple_repeat 1 31 0 704 289 24 14 chr5 156962557 156962768 -46122764 + MIR SINE MIR 48 260 -2 396 198 21 64 chr5 156963013 156963200 -46122332 + CT-rich Low_complexity Low_complexity 1 179 0 469 291 0 32 chr5 156963730 156964033 -46121499 + C-rich Low_complexity Low_complexity 1 293 0 312 244 0 56 chr5 156966047 156966137 -46119395 + MIR3 SINE MIR 87 171 -37 356 238 20 10 chr5 156966901 156967002 -46118530 + MER103 DNA DNA 21 122 -44 1934 164 7 3 chr5 156967090 156967395 -46118137 - AluJb SINE Alu -6 306 1 354 320 77 64 chr5 156967472 156967706 -46117826 + MIR SINE MIR 21 257 -5 198 224 0 0 chr5 156967990 156968039 -46117493 + (CAG)n Simple_repeat Simple_repeat 3 51 0 384 22 0 0 chr5 156969751 156969796 -46115736 + (CCCCAG)n Simple_repeat Simple_repeat 1 45 0 194 225 0 0 chr5 156972101 156972141 -46113391 + L3b LINE CR1 1352 1391 -192 332 261 43 0 chr5 156972941 156973033 -46112499 + MIR SINE MIR 119 214 -48 351 0 0 0 chr5 156973708 156973747 -46111785 + (TG)n Simple_repeat Simple_repeat 1 39 0 396 250 28 0 chr5 156974938 156975046 -46110486 - MIR SINE MIR -63 145 35 392 271 111 21 chr5 156976514 156976658 -46108874 - MIR SINE MIR -29 233 77 187 250 21 0 chr5 156978946 156978994 -46106538 + L2 LINE L2 3224 3272 0 240 222 56 67 chr5 156979132 156979222 -46106310 + MIR SINE MIR 51 139 -69 204 316 52 37 chr5 156979328 156979464 -46106068 - L2 LINE L2 -209 3063 2926 2077 107 7 0 chr5 156979741 156980030 -46105502 + AluSx SINE Alu 1 291 -21 204 343 8 52 chr5 156980202 156980336 -46105196 + MIR SINE MIR 16 143 -65 291 312 9 28 chr5 156981082 156981191 -46104341 + MIR SINE MIR 45 151 -57 212 295 9 98 chr5 156981230 156981342 -46104190 - MIR SINE MIR -51 211 110 448 304 31 36 chr5 156982353 156982547 -46102985 + MIR SINE MIR 28 220 -42 1526 149 67 4 chr5 156982618 156982886 -46102646 - AluJo SINE Alu -19 293 9 512 297 24 88 chr5 156983291 156983486 -46102046 + MIR SINE MIR 24 201 -61 1789 116 0 0 chr5 156983486 156983736 -46101796 + AluSq SINE Alu 59 308 -5 512 297 24 88 chr5 156983736 156983789 -46101743 + MIR SINE MIR 201 256 -6 315 0 0 0 chr5 156985792 156985827 -46099705 + (TG)n Simple_repeat Simple_repeat 2 36 0 355 316 119 26 chr5 156986628 156986821 -46098711 - MIR SINE MIR -29 233 23 366 251 19 28 chr5 156987542 156987662 -46097870 + MLT1K LTR MaLR 147 281 -307 2317 61 3 7 chr5 156987664 156987959 -46097573 + AluSg SINE Alu 1 294 -16 253 155 35 0 chr5 156988129 156988187 -46097345 + MLT1K LTR MaLR 524 583 -5 220 256 145 52 chr5 156988194 156988366 -46097166 + L2 LINE L2 2906 3093 -179 237 293 189 9 chr5 156988533 156988639 -46096893 + MIR SINE MIR 5 129 -133 2360 87 3 0 chr5 156989314 156989624 -46095908 - AluSp SINE Alu -1 312 2 1034 287 123 25 chr5 156989625 156989915 -46095617 + L2 LINE L2 2741 3001 -312 1895 141 3 0 chr5 156989915 156990226 -46095306 + AluSx SINE Alu 1 312 0 1034 287 123 25 chr5 156990226 156990432 -46095100 + L2 LINE L2 3001 3275 -38 2147 102 16 7 chr5 156990432 156990736 -46094796 + AluSq SINE Alu 1 307 -6 2345 80 0 0 chr5 156990736 156991036 -46094496 + AluSg SINE Alu 1 300 -10 205 241 19 0 chr5 156991041 156991095 -46094437 - MIR SINE MIR -111 151 97 1804 154 3 11 chr5 156991670 156991841 -46093691 - AluJb SINE Alu 0 305 135 2341 86 0 0 chr5 156991841 156992142 -46093390 - AluY SINE Alu -10 301 1 1804 154 3 11 chr5 156992142 156992277 -46093255 - AluJb SINE Alu -170 135 1 679 150 0 0 chr5 156992325 156992425 -46093107 - FLAM_C SINE Alu -33 110 11 490 289 36 108 chr5 156993944 156994092 -46091440 + MIR SINE MIR 6 163 -99 2166 106 0 7 chr5 156994092 156994410 -46091122 + AluSq SINE Alu 2 313 0 2171 89 10 23 chr5 156994412 156994716 -46090816 + AluSg SINE Alu 1 300 -10 490 289 36 108 chr5 156994716 156994841 -46090691 + MIR SINE MIR 164 262 0 400 303 90 21 chr5 156995393 156995627 -46089905 - MIR SINE MIR 0 262 13 855 300 134 12 chr5 156995681 156996389 -46089143 + L2 LINE L2 2503 3299 -14 581 253 203 0 chr5 156997751 156997933 -46087599 - MIR SINE MIR -28 234 16 26 0 0 0 chr5 156998351 156998377 -46087155 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr5 156998740 156998764 -46086768 + (CCG)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr5 156998861 156998889 -46086643 + GC_rich Low_complexity Low_complexity 1 28 0 185 100 33 0 chr5 156999210 156999240 -46086292 + MIR SINE MIR 117 147 -61 235 325 39 58 chr5 156999982 157000136 -46085396 - MER5A DNA MER1_type 0 189 39 687 344 16 16 chr5 157000246 157000490 -46085042 + MIR SINE MIR 8 251 -11 2224 103 6 3 chr5 157001215 157001526 -46084006 - AluSx SINE Alu 0 312 1 226 356 23 8 chr5 157001746 157001878 -46083654 + (CATATA)n Simple_repeat Simple_repeat 1 134 0 * 253 391 11 0 chr5 157001799 157001973 -46083559 + (CA)n Simple_repeat Simple_repeat 1 176 0 446 271 123 68 chr5 157002214 157002293 -46083239 - MIR SINE MIR -7 255 182 2267 93 10 0 chr5 157002293 157002594 -46082938 - AluSc SINE Alu -5 304 1 446 271 123 68 chr5 157002594 157002662 -46082870 - MIR SINE MIR -80 182 119 1741 150 65 92 chr5 157002662 157002929 -46082603 - MLT1B LTR MaLR 0 390 117 2243 103 0 0 chr5 157002929 157003231 -46082301 - AluSx SINE Alu -10 302 1 2184 117 3 0 chr5 157003231 157003531 -46082001 - AluSq SINE Alu -12 301 1 1741 150 65 92 chr5 157003531 157003663 -46081869 - MLT1B LTR MaLR -271 119 1 446 271 123 68 chr5 157003663 157003750 -46081782 - MIR SINE MIR -143 119 7 252 0 0 0 chr5 157003766 157003794 -46081738 + (TG)n Simple_repeat Simple_repeat 2 29 0 217 297 16 0 chr5 157004439 157004503 -46081029 + MIR SINE MIR 109 173 -89 303 28 0 0 chr5 157004584 157004620 -46080912 + (ATG)n Simple_repeat Simple_repeat 2 37 0 241 319 7 89 chr5 157004636 157004720 -46080812 - MIR SINE MIR -1 261 190 1765 145 0 57 chr5 157004720 157004899 -46080633 - AluSx SINE Alu -13 299 144 2232 103 3 0 chr5 157004899 157005199 -46080333 - AluSx SINE Alu -10 302 2 1765 145 0 57 chr5 157005199 157005336 -46080196 - AluSx SINE Alu -168 144 1 241 319 7 89 chr5 157005336 157005386 -46080146 - MIR SINE MIR -72 190 138 695 143 9 0 chr5 157005389 157005494 -46080038 - U6 snRNA snRNA 0 107 2 1788 149 7 33 chr5 157005524 157005627 -46079905 + AluJb SINE Alu 1 105 -207 2830 84 0 0 chr5 157005627 157005982 -46079550 + THE1A LTR MaLR 1 355 0 12488 72 7 18 chr5 157005982 157006252 -46079280 + THE1A-int LTR MaLR 1 272 -1308 2242 122 0 0 chr5 157006252 157006564 -46078968 - AluSx SINE Alu 0 312 1 2153 82 21 0 chr5 157006564 157006843 -46078689 - AluY SINE Alu -17 294 9 2262 106 0 13 chr5 157006851 157007162 -46078370 - AluSc SINE Alu -2 307 1 12488 72 7 18 chr5 157007162 157008296 -46077236 + THE1A-int LTR MaLR 278 1423 -157 2081 120 3 0 chr5 157008296 157008608 -46076924 - AluSx SINE Alu 0 313 1 2224 122 3 0 chr5 157008608 157008911 -46076621 - AluSx SINE Alu -7 305 1 12488 72 7 18 chr5 157008911 157009090 -46076442 + THE1A-int LTR MaLR 1421 1580 0 2665 73 3 43 chr5 157009092 157009411 -46076121 + THE1A LTR MaLR 3 307 -48 2318 92 0 0 chr5 157009411 157009714 -46075818 - AluY SINE Alu -6 305 3 2665 73 3 43 chr5 157009714 157009762 -46075770 + THE1A LTR MaLR 307 355 0 1788 149 7 33 chr5 157009762 157009956 -46075576 + AluJb SINE Alu 105 294 -18 259 263 79 0 chr5 157009960 157010036 -46075496 - MIR SINE MIR -130 132 51 1731 158 42 0 chr5 157010054 157010339 -46075193 + AluJo SINE Alu 1 297 -15 2145 89 0 4 chr5 157010533 157010836 -46074696 - AluSg1 SINE Alu 0 302 1 2197 108 10 0 chr5 157010837 157011133 -46074399 - AluSq SINE Alu -14 299 1 392 280 153 0 chr5 157011152 157011309 -46074223 - MIR SINE MIR -75 187 7 303 235 0 0 chr5 157011523 157011591 -46073941 - MER117 DNA MER1_type -102 95 28 272 323 42 42 chr5 157011613 157011802 -46073730 - L2 LINE L2 -69 3203 3015 182 340 143 29 chr5 157011921 157012130 -46073402 - L2 LINE L2 -337 2977 2745 216 212 44 44 chr5 157012244 157012349 -46073183 - MIR SINE MIR -64 144 39 219 316 0 38 chr5 157012783 157012862 -46072670 + L3 LINE CR1 332 407 -1170 599 268 45 35 chr5 157013104 157013302 -46072230 - L2 LINE L2 -10 3303 3104 2055 124 30 0 chr5 157013307 157013605 -46071927 + AluSx SINE Alu 6 312 0 1149 129 12 0 chr5 157013605 157013776 -46071756 + AluJb SINE Alu 133 305 -7 622 231 22 8 chr5 157014015 157014149 -46071383 - MIR SINE MIR -77 185 50 2217 109 0 3 chr5 157014500 157014804 -46070728 - AluSg SINE Alu -7 303 1 2135 92 3 3 chr5 157014804 157015087 -46070445 - AluSq SINE Alu -22 291 9 1754 167 7 23 chr5 157015089 157015255 -46070277 - AluJb SINE Alu -11 301 134 2301 74 3 3 chr5 157015255 157015554 -46069978 - AluY SINE Alu -12 299 1 2267 80 3 0 chr5 157015557 157015856 -46069676 - AluY SINE Alu -11 300 1 1754 167 7 23 chr5 157015856 157015991 -46069541 - AluJb SINE Alu -180 132 1 312 386 61 0 chr5 157015995 157016158 -46069374 + MIR SINE MIR 46 218 -44 493 149 161 0 chr5 157016158 157016245 -46069287 + FRAM SINE Alu 36 136 -40 1429 159 100 0 chr5 157016252 157016503 -46069029 + AluJo SINE Alu 1 276 -36 2145 111 3 3 chr5 157016505 157016802 -46068730 - AluSx SINE Alu -15 297 1 2373 89 0 0 chr5 157016813 157017115 -46068417 - AluSx SINE Alu -10 302 1 726 192 8 0 chr5 157017447 157017572 -46067960 - FLAM_A SINE Alu -7 126 1 234 191 0 0 chr5 157017791 157017838 -46067694 + (CA)n Simple_repeat Simple_repeat 1 47 0 1393 148 75 88 chr5 157018021 157018154 -46067378 + AluJb SINE Alu 1 134 -178 1904 109 25 7 chr5 157018154 157018438 -46067094 + AluSg SINE Alu 20 308 -2 1393 148 75 88 chr5 157018438 157018609 -46066923 + AluJb SINE Alu 134 301 -11 294 330 105 45 chr5 157019357 157019557 -46065975 - L2 LINE L2 -35 3237 3026 717 149 10 144 chr5 157019574 157019649 -46065883 + MIR SINE MIR 78 161 -101 741 158 0 43 chr5 157019649 157019782 -46065750 + AluJo/FLAM SINE Alu 1 128 -169 2263 92 3 0 chr5 157019782 157020087 -46065445 - AluSx SINE Alu -6 306 1 717 149 10 144 chr5 157020092 157020224 -46065308 + MIR SINE MIR 161 257 -5 2192 96 0 0 chr5 157020243 157020547 -46064985 + AluSx SINE Alu 1 304 0 514 286 39 0 chr5 157020925 157021103 -46064429 - L2 LINE L2 -179 3093 2909 717 193 0 0 chr5 157022263 157022403 -46063129 - Charlie1a DNA MER1_type 0 1455 1316 1008 153 0 0 chr5 157022408 157022596 -46062936 - AluSg/x SINE Alu 0 321 134 1883 137 39 0 chr5 157022596 157022880 -46062652 - AluSx SINE Alu -17 295 1 1991 118 39 105 chr5 157022882 157022964 -46062568 - Charlie1a DNA MER1_type -1450 1311 1225 2319 110 0 0 chr5 157022964 157023274 -46062258 + AluSx SINE Alu 1 310 -2 1991 118 39 105 chr5 157023274 157023733 -46061799 - Charlie1a DNA MER1_type -1536 1225 806 2269 77 0 39 chr5 157023741 157024051 -46061481 + AluSg SINE Alu 1 298 -12 738 182 0 0 chr5 157024067 157024188 -46061344 + FLAM_A SINE Alu 20 140 -2 557 279 5 5 chr5 157024198 157024406 -46061126 - Charlie1a DNA MER1_type -639 816 609 696 231 8 0 chr5 157024434 157024564 -46060968 + FLAM_A SINE Alu 1 131 -2 1061 172 65 53 chr5 157024580 157024797 -46060735 - Charlie1a DNA MER1_type -2136 625 412 261 0 0 0 chr5 157024797 157024826 -46060706 + (TA)n Simple_repeat Simple_repeat 2 30 0 2136 92 14 0 chr5 157024827 157025108 -46060424 - AluSg SINE Alu -25 285 1 1061 172 65 53 chr5 157025108 157025150 -46060382 - Charlie1a DNA MER1_type -2348 413 361 657 193 204 0 chr5 157025163 157025339 -46060193 - Charlie1a DNA MER1_type -1236 219 8 473 293 136 15 chr5 157027114 157027312 -46058220 - MIR SINE MIR -5 257 36 285 278 14 0 chr5 157027595 157027667 -46057865 + MIR SINE MIR 80 152 -110 505 311 20 0 chr5 157029162 157029310 -46056222 - MIR SINE MIR -16 246 96 243 290 16 0 chr5 157029360 157029422 -46056110 - L2 LINE L2 0 3272 3210 210 103 0 0 chr5 157029605 157029634 -46055898 + MIR SINE MIR 117 145 -117 236 317 0 24 chr5 157029992 157030159 -46055373 + (TGAG)n Simple_repeat Simple_repeat 4 166 0 * 273 281 0 50 chr5 157030044 157030165 -46055367 + (TG)n Simple_repeat Simple_repeat 1 115 0 461 203 59 8 chr5 157031294 157031412 -46054120 + MIR SINE MIR 21 144 -118 240 177 97 32 chr5 157032313 157032375 -46053157 - MIR SINE MIR -67 141 76 190 267 56 78 chr5 157033458 157033548 -46051984 + MIR3 SINE MIR 88 175 -33 357 221 52 39 chr5 157034474 157034628 -46050904 + (TCTCTG)n Simple_repeat Simple_repeat 3 158 0 207 291 103 42 chr5 157036534 157036699 -46048833 + L2 LINE L2 2914 3088 -225 248 271 139 33 chr5 157036843 157036965 -46048567 - MIR SINE MIR -19 243 109 1681 163 20 14 chr5 157037103 157037223 -46048309 + AluJb SINE Alu 1 119 -193 242 0 61 0 chr5 157037223 157037256 -46048276 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1681 163 20 14 chr5 157037256 157037430 -46048102 + AluJb SINE Alu 119 297 -15 2369 78 3 3 chr5 157037433 157037742 -46047790 + AluY SINE Alu 1 309 -2 356 316 129 7 chr5 157038914 157039069 -46046463 + MIR SINE MIR 24 197 -65 1851 172 3 0 chr5 157039180 157039482 -46046050 - AluJb SINE Alu -9 303 1 201 342 8 8 chr5 157039823 157039943 -46045589 + (CA)n Simple_repeat Simple_repeat 2 121 0 340 276 0 24 chr5 157040019 157040142 -46045390 + (CA)n Simple_repeat Simple_repeat 1 120 0 256 337 0 22 chr5 157040998 157041087 -46044445 - MIR SINE MIR -73 189 103 2277 103 3 0 chr5 157041213 157041525 -46044007 - AluSq SINE Alu 0 313 1 339 135 0 13 chr5 157041575 157041673 -46043859 + AluJ SINE Alu 1 135 -167 1655 168 50 10 chr5 157041674 157041805 -46043727 + AluJb SINE Alu 1 125 -187 1822 144 16 22 chr5 157041805 157042118 -46043414 + AluJb SINE Alu 1 311 -1 1655 168 50 10 chr5 157042118 157042283 -46043249 + AluJb SINE Alu 125 309 -3 223 346 77 19 chr5 157042413 157042517 -46043015 - MIR SINE MIR -63 199 90 288 0 0 0 chr5 157043025 157043057 -46042475 + (TG)n Simple_repeat Simple_repeat 1 32 0 325 150 173 8 chr5 157043232 157043359 -46042173 - MER96B DNA MER1_type? -32 385 238 185 315 34 0 chr5 157043965 157044054 -46041478 - L2 LINE L2 -309 2963 2872 563 239 158 0 chr5 157044295 157044479 -46041053 - MIR SINE MIR -4 258 46 848 222 0 6 chr5 157045284 157045451 -46040081 + AluJ SINE Alu 137 302 0 331 281 11 0 chr5 157047322 157047411 -46038121 - MIR SINE MIR -76 132 43 622 307 29 0 chr5 157048513 157048742 -46036790 - MIR SINE MIR -7 255 20 331 316 68 8 chr5 157049304 157049421 -46036111 + MIR SINE MIR 68 191 -71 2242 122 3 0 chr5 157049421 157049732 -46035800 - AluSx SINE Alu 0 312 1 1057 174 14 19 chr5 157049741 157049948 -46035584 - AluJo SINE Alu -21 291 86 217 303 118 75 chr5 157050861 157051208 -46034324 + L2 LINE L2 2569 2930 -384 374 337 36 15 chr5 157051325 157051520 -46034012 + MIR SINE MIR 16 218 -44 266 296 40 72 chr5 157051564 157051716 -46033816 + L2 LINE L2 3126 3272 0 23 33 0 0 chr5 157051984 157052014 -46033518 + GC_rich Low_complexity Low_complexity 1 30 0 242 324 29 10 chr5 157054050 157054152 -46031380 - MIR3 SINE MIR -31 177 74 292 202 0 161 chr5 157054179 157054222 -46031310 + MIR SINE MIR 72 120 -138 1313 66 0 11 chr5 157054222 157054404 -46031128 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2210 61 4 7 chr5 157054405 157054683 -46030849 - AluY SINE Alu -34 277 1 2183 127 0 10 chr5 157054689 157055003 -46030529 - AluSx SINE Alu -1 311 1 292 202 0 161 chr5 157055003 157055099 -46030433 + MIR SINE MIR 125 196 -62 217 280 0 0 chr5 157055143 157055193 -46030339 - MIR SINE MIR -10 252 203 253 277 28 92 chr5 157055776 157055829 -46029703 + MIR SINE MIR 109 164 -98 2233 90 3 3 chr5 157055829 157056130 -46029402 + AluSp SINE Alu 1 301 -12 253 277 28 92 chr5 157056130 157056217 -46029315 + MIR SINE MIR 164 240 -22 505 328 125 13 chr5 157056315 157056690 -46028842 - L2 LINE L2 0 3272 2856 4567 196 40 61 chr5 157057239 157057673 -46027859 + MER45B DNA AcHobo 3 445 -1136 1865 93 4 36 chr5 157057673 157057951 -46027581 + AluSx SINE Alu 11 279 -33 204 67 0 0 chr5 157057953 157057983 -46027549 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 4567 196 40 61 chr5 157057983 157058604 -46026928 + MER45B DNA AcHobo 446 1038 -2 2364 46 0 0 chr5 157058757 157059065 -46026467 - AluY SINE Alu 0 309 2 349 336 37 0 chr5 157059649 157059783 -46025749 + MIR SINE MIR 95 233 -29 811 321 103 19 chr5 157059903 157060320 -46025212 + L2 LINE L2 2834 3285 -28 255 304 0 14 chr5 157060307 157060376 -46025156 - L2 LINE L2 -67 3205 3138 * 3442 155 36 42 chr5 157060409 157060646 -46024886 - L1MB3 LINE L1 0 6183 5946 1562 163 8 4 chr5 157060646 157060910 -46024622 - AluJo SINE Alu -8 304 40 3442 155 36 42 chr5 157060910 157061335 -46024197 - L1MB3 LINE L1 -237 5946 5525 562 184 20 10 chr5 157061413 157061511 -46024021 - FRAM SINE Alu -76 100 2 366 285 62 42 chr5 157061587 157061872 -46023660 - L2 LINE L2 -232 3081 2781 2324 88 0 3 chr5 157061872 157062178 -46023354 - AluSg SINE Alu -5 305 1 218 233 163 12 chr5 157062903 157062989 -46022543 - MIR SINE MIR -87 121 23 2068 131 16 3 chr5 157063053 157063358 -46022174 - AluSp SINE Alu -4 309 1 225 320 0 0 chr5 157063774 157063852 -46021680 - MIR SINE MIR -65 143 66 946 120 0 0 chr5 157064060 157064193 -46021339 - AluJb SINE Alu -14 298 166 630 323 127 24 chr5 157064204 157064622 -46020910 - L3 LINE CR1 -27 1550 1090 1867 164 3 0 chr5 157064993 157065297 -46020235 + AluJo SINE Alu 3 307 -5 941 242 27 42 chr5 157065786 157066038 -46019494 - L1ME4a LINE L1 -233 5888 5641 1801 148 26 19 chr5 157066038 157066348 -46019184 + AluJb SINE Alu 1 312 0 941 242 27 42 chr5 157066348 157066430 -46019102 - L1ME4a LINE L1 -480 5641 5559 21 0 0 0 chr5 157066503 157066524 -46019008 + AT_rich Low_complexity Low_complexity 1 21 0 920 98 8 0 chr5 157066524 157066657 -46018875 - L1PB1 LINE L1 0 6151 6018 246 293 39 74 chr5 157066676 157066905 -46018627 - L1MC4 LINE L1 -1 8041 7821 2371 205 56 5 chr5 157066940 157067530 -46018002 - L1ME2 LINE L1 -9 6155 5536 440 311 79 95 chr5 157067568 157067821 -46017711 - L3 LINE CR1 -513 1064 815 2206 122 0 0 chr5 157067821 157068133 -46017399 - AluSx SINE Alu 0 312 1 440 311 79 95 chr5 157068133 157068184 -46017348 - L3 LINE CR1 -762 815 765 731 220 57 17 chr5 157068239 157068416 -46017116 - MIR SINE MIR -66 196 13 373 364 34 87 chr5 157068405 157068721 -46016811 - L3 LINE CR1 -820 757 426 * 2342 95 0 0 chr5 157068721 157069025 -46016507 - AluY SINE Alu -7 304 1 2324 94 0 0 chr5 157069025 157069324 -46016208 - AluSx SINE Alu -13 299 1 373 364 34 87 chr5 157069324 157069476 -46016056 - L3 LINE CR1 -1149 428 313 224 309 0 0 chr5 157069500 157069555 -46015977 + L2 LINE L2 3247 3301 -12 2169 109 0 0 chr5 157069562 157069874 -46015658 - AluSq SINE Alu 0 312 1 2177 99 3 3 chr5 157069881 157070183 -46015349 - AluSx SINE Alu -10 302 1 2036 183 33 39 chr5 157070219 157070547 -46014985 - L1MB4 LINE L1 0 6180 5854 1809 132 14 24 chr5 157070547 157070836 -46014696 + AluJo SINE Alu 1 286 -26 2036 183 33 39 chr5 157070836 157070993 -46014539 - L1MB4 LINE L1 -326 5854 5698 712 253 64 88 chr5 157071044 157071332 -46014200 + L2 LINE L2 1823 2101 -1213 1991 120 17 0 chr5 157071332 157071624 -46013908 - AluJb SINE Alu -9 303 7 712 253 64 88 chr5 157071624 157071723 -46013809 + L2 LINE L2 2101 2201 -1113 1944 160 0 0 chr5 157071898 157072191 -46013341 + AluJo SINE Alu 2 294 -18 1716 156 0 11 chr5 157072195 157072478 -46013054 + AluJb SINE Alu 3 282 -30 204 40 0 0 chr5 157072488 157072513 -46013019 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 616 258 160 64 chr5 157072604 157073085 -46012447 + MLT1K LTR MaLR 38 564 -24 587 262 70 0 chr5 157073456 157073628 -46011904 + MIR SINE MIR 63 246 -16 26 0 0 0 chr5 157074254 157074280 -46011252 + GC_rich Low_complexity Low_complexity 1 26 0 195 314 66 50 chr5 157075103 157075224 -46010308 - L2 LINE L2 0 3313 3191 223 157 20 20 chr5 157075283 157075334 -46010198 + L2 LINE L2 3029 3079 -234 611 171 90 0 chr5 157075425 157075536 -46009996 + AluJb SINE Alu 190 310 -2 730 298 83 31 chr5 157075579 157075928 -46009604 - L2 LINE L2 -3 3310 2944 644 121 0 0 chr5 157076183 157076274 -46009258 + AluJ/FLAM SINE Alu 3 93 -219 1402 264 59 7 chr5 157076299 157076757 -46008775 - L2 LINE L2 -940 2374 1893 1969 127 13 38 chr5 157076805 157077121 -46008411 + AluSq SINE Alu 1 308 -5 1770 152 40 0 chr5 157077198 157077474 -46008058 + AluJb SINE Alu 7 293 -19 385 165 0 31 chr5 157077502 157077599 -46007933 + L1M4 LINE L1 3945 4038 -2108 414 161 103 0 chr5 157077599 157077686 -46007846 + AluJ/FRAM SINE Alu 217 312 0 612 283 6 25 chr5 157077692 157077851 -46007681 - MER91A DNA MER1_type -40 156 1 570 254 106 16 chr5 157077851 157078023 -46007509 - L2 LINE L2 -1408 1906 1718 339 33 49 33 chr5 157078741 157078802 -46006730 + (TTTC)n Simple_repeat Simple_repeat 1 62 0 * 884 140 11 17 chr5 157078787 157078966 -46006566 + CT-rich Low_complexity Low_complexity 3 180 0 2113 113 10 7 chr5 157078984 157079294 -46006238 - AluSq SINE Alu -2 311 1 248 264 56 76 chr5 157079402 157079550 -46005982 - MIR SINE MIR -65 143 35 326 360 108 7 chr5 157079819 157079958 -46005574 - MIR SINE MIR -3 259 107 401 233 192 0 chr5 157080277 157080397 -46005135 + MIR SINE MIR 84 226 -36 271 345 134 0 chr5 157080576 157080770 -46004762 - L2 LINE L2 -214 3058 2839 295 315 196 12 chr5 157083456 157083614 -46001918 - MIR SINE MIR -59 203 22 1351 255 123 37 chr5 157084338 157084419 -46001113 - L1MC4 LINE L1 -44 7998 7925 249 33 0 0 chr5 157084419 157084449 -46001083 + (TC)n Simple_repeat Simple_repeat 1 30 0 1351 255 123 37 chr5 157084449 157084967 -46000565 - L1MC4 LINE L1 -117 7925 7347 881 258 43 25 chr5 157085920 157086199 -45999333 + L2 LINE L2 1047 1330 -1984 704 125 14 97 chr5 157086199 157086343 -45999189 - AluSq/x SINE Alu -180 133 2 2746 264 143 2 chr5 157086346 157086692 -45998840 + L2 LINE L2 1322 1618 -1696 2152 120 0 0 chr5 157086692 157086991 -45998541 + AluSx SINE Alu 1 299 -13 2746 264 143 2 chr5 157086991 157087680 -45997852 + L2 LINE L2 1618 2503 -811 229 262 0 16 chr5 157089360 157089421 -45996111 - MIR SINE MIR -109 99 40 211 222 19 0 chr5 157089924 157089978 -45995554 + (TG)n Simple_repeat Simple_repeat 1 55 0 864 198 0 0 chr5 157090659 157090904 -45994628 + (TG)n Simple_repeat Simple_repeat 1 245 0 272 277 117 0 chr5 157091110 157091204 -45994328 + MIR SINE MIR 56 160 -102 970 285 169 7 chr5 157091205 157091779 -45993753 - L2 LINE L2 -2 3311 2648 266 303 98 8 chr5 157092228 157092360 -45993172 + MIR3 SINE MIR 48 191 -17 260 250 52 69 chr5 157093183 157093299 -45992233 + L3b LINE CR1 1278 1391 -192 283 367 8 8 chr5 157093665 157093793 -45991739 + MER5A DNA MER1_type 56 183 -6 190 108 81 0 chr5 157094226 157094263 -45991269 - MIR SINE MIR -60 148 109 218 338 0 0 chr5 157095662 157095730 -45989802 + MIR SINE MIR 80 147 -115 259 289 56 11 chr5 157096053 157096143 -45989389 - L3b LINE CR1 -193 1390 1297 243 262 119 0 chr5 157096782 157096866 -45988666 + L2 LINE L2 3139 3232 -40 315 299 6 28 chr5 157097348 157097399 -45988133 + CT-rich Low_complexity Low_complexity 2 53 -121 2268 85 3 0 chr5 157097399 157097694 -45987838 - AluY SINE Alu -15 296 1 315 299 6 28 chr5 157097694 157097819 -45987713 + CT-rich Low_complexity Low_complexity 53 174 0 836 233 142 19 chr5 157097874 157098183 -45987349 - L2 LINE L2 -35 3278 2932 298 291 47 0 chr5 157098905 157098991 -45986541 + L2 LINE L2 3224 3313 0 386 316 158 13 chr5 157101160 157101477 -45984055 + L2 LINE L2 1635 1997 -1317 2268 90 3 7 chr5 157101509 157101819 -45983713 + AluSq SINE Alu 1 309 -4 1386 252 48 52 chr5 157101819 157102437 -45983095 - L1MC5 LINE L1 -54 7907 7292 313 206 168 9 chr5 157102442 157102549 -45982983 + L2 LINE L2 1982 2105 -1209 351 315 155 9 chr5 157102904 157103123 -45982409 + L2 LINE L2 2817 3067 -205 295 263 0 8 chr5 157103397 157103474 -45982058 + MIR SINE MIR 40 113 -95 463 323 65 0 chr5 157103616 157103802 -45981730 - MIR SINE MIR -16 246 49 258 271 54 84 chr5 157103995 157104060 -45981472 - L1ME LINE L1 -5002 1068 1003 1788 167 0 3 chr5 157104060 157104383 -45981149 + AluJb SINE Alu 1 312 0 258 271 54 84 chr5 157104383 157104484 -45981048 - L1ME LINE L1 -5067 1003 900 1015 39 86 0 chr5 157104484 157104612 -45980920 + MER85 DNA T2_type 1 139 0 258 271 54 84 chr5 157104612 157105001 -45980531 - L1ME LINE L1 -5170 900 529 2218 110 0 0 chr5 157106730 157107030 -45978502 - AluSx SINE Alu -12 300 1 202 250 0 0 chr5 157107924 157107964 -45977568 + L2 LINE L2 3268 3307 -6 522 259 104 20 chr5 157109336 157109537 -45975995 + MIR SINE MIR 20 237 -25 1559 84 0 0 chr5 157110183 157110385 -45975147 - AluY SINE Alu -1 310 109 315 252 146 16 chr5 157110401 157110524 -45975008 + MIR SINE MIR 4 142 -120 238 293 141 0 chr5 157111008 157111107 -45974425 - L2 LINE L2 -257 3056 2944 915 163 10 25 chr5 157111107 157111306 -45974226 - L1P5 LINE L1 -409 5742 5545 1421 296 143 37 chr5 157111314 157112423 -45973109 - L2 LINE L2 -735 2579 1354 297 329 106 46 chr5 157112429 157112843 -45972689 - MLT1L LTR MaLR -5 610 172 256 207 198 69 chr5 157112874 157112990 -45972542 - MLT1K LTR MaLR -375 213 83 771 308 155 15 chr5 157113027 157113364 -45972168 - L2 LINE L2 -1964 1350 927 2030 128 85 23 chr5 157113364 157113717 -45971815 - THE1C LTR MaLR 0 375 1 771 308 155 15 chr5 157113717 157113850 -45971682 - L2 LINE L2 -2387 927 814 487 250 83 5 chr5 157114939 157115143 -45970389 - L1MEc LINE L1 -3352 2863 2644 4524 154 16 44 chr5 157115156 157116140 -45969392 - L1MB5 LINE L1 -36 6138 5181 1874 146 16 16 chr5 157116140 157116316 -45969216 - AluJo SINE Alu -2 310 132 982 71 59 0 chr5 157116316 157116485 -45969047 + CT-rich Low_complexity Low_complexity 2 180 0 1874 146 16 16 chr5 157116485 157116616 -45968916 - AluJo SINE Alu -179 133 3 558 206 0 0 chr5 157116636 157116777 -45968755 - L1MB5 LINE L1 -2647 3499 3359 1184 256 67 11 chr5 157116786 157117347 -45968185 - L1MEc LINE L1 -3558 2657 2086 359 328 142 40 chr5 157117396 157117649 -45967883 - L1MEc LINE L1 -4387 2009 1731 220 316 0 0 chr5 157118059 157118135 -45967397 + (CATATA)n Simple_repeat Simple_repeat 5 80 0 721 263 95 22 chr5 157119010 157119242 -45966290 + MIR SINE MIR 12 260 -2 189 211 0 0 chr5 157119869 157119921 -45965611 + (CCA)n Simple_repeat Simple_repeat 3 54 0 1763 154 0 47 chr5 157120080 157120399 -45965133 - AluJo SINE Alu -8 304 1 411 310 78 0 chr5 157120585 157120714 -45964818 - L2 LINE L2 0 3272 3134 186 209 0 0 chr5 157120736 157120779 -45964753 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 453 191 45 9 chr5 157122905 157123015 -45962517 + MER5A DNA MER1_type 66 179 -10 410 305 0 64 chr5 157125336 157125498 -45960034 - L1MC/D LINE L1 -2220 5588 5438 2289 94 0 3 chr5 157125498 157125797 -45959735 - AluSx SINE Alu -14 298 1 410 305 0 64 chr5 157125797 157125821 -45959711 - L1MC/D LINE L1 -2370 5438 5414 4828 145 41 12 chr5 157125828 157126170 -45959362 - L1MB2 LINE L1 -3 6168 5837 853 100 69 0 chr5 157126170 157126300 -45959232 + MER85 DNA T2_type 1 139 0 4828 145 41 12 chr5 157126300 157127019 -45958513 - L1MB2 LINE L1 -334 5837 5078 329 273 52 11 chr5 157127021 157127199 -45958333 - L1MC/D LINE L1 -777 5369 5189 511 84 17 25 chr5 157129368 157129487 -45956045 - Charlie7 DNA MER1_type -61 2551 2434 273 150 17 17 chr5 157129474 157129534 -45955998 - Charlie7 DNA MER1_type -2507 105 46 * 299 300 42 17 chr5 157129708 157129828 -45955704 - L2 LINE L2 -18 3254 3132 360 293 211 13 chr5 157130784 157130999 -45954533 - MIR SINE MIR -6 256 3 261 0 0 0 chr5 157131043 157131072 -45954460 + (CA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr5 157131834 157131856 -45953676 + AT_rich Low_complexity Low_complexity 1 22 0 424 149 0 69 chr5 157133535 157133622 -45951910 + L1ME3A LINE L1 6080 6160 -10 305 292 56 35 chr5 157133622 157133766 -45951766 - MER5B DNA MER1_type -28 150 4 285 146 0 0 chr5 157133923 157133971 -45951561 + (A)n Simple_repeat Simple_repeat 1 48 0 1309 237 52 20 chr5 157134041 157134448 -45951084 + L1ME4a LINE L1 5255 5678 -443 763 248 78 30 chr5 157134452 157134682 -45950850 - MIR SINE MIR 0 262 22 402 308 44 0 chr5 157134706 157134865 -45950667 + L1ME4a LINE L1 5670 5835 -286 350 250 0 45 chr5 157135713 157135825 -45949707 + MIR SINE MIR 67 173 -89 221 258 15 0 chr5 157135875 157135941 -45949591 + (TGAA)n Simple_repeat Simple_repeat 2 68 0 186 305 23 62 chr5 157136268 157136396 -45949136 + L3b LINE CR1 1295 1417 -166 352 194 0 0 chr5 157136531 157136593 -45948939 - Alu SINE Alu 0 302 241 208 267 58 35 chr5 157136726 157136812 -45948720 - L2 LINE L2 0 3272 3185 22 0 0 0 chr5 157138363 157138385 -45947147 + AT_rich Low_complexity Low_complexity 1 22 0 2295 108 0 3 chr5 157139199 157139505 -45946027 - AluSg1 SINE Alu -4 305 1 1553 90 0 10 chr5 157140069 157140301 -45945231 - AluSg/x SINE Alu 0 314 85 207 239 22 0 chr5 157140333 157140379 -45945153 - L2 LINE L2 0 3313 3267 248 160 0 132 chr5 157140412 157140518 -45945014 + L2 LINE L2 3118 3209 -104 2462 63 0 10 chr5 157140539 157140841 -45944691 - AluY SINE Alu -12 299 1 2980 281 106 52 chr5 157140856 157141823 -45943709 - L2 LINE L2 -39 3274 2361 2309 83 43 0 chr5 157141823 157142123 -45943409 + AluSp SINE Alu 1 313 0 2980 281 106 52 chr5 157142123 157142932 -45942600 - L2 LINE L2 -952 2361 1394 2705 119 11 47 chr5 157143052 157143521 -45942011 - Tigger2 DNA MER2_type 0 2718 2267 432 132 0 15 chr5 157143504 157143572 -45941960 - Tigger2 DNA MER2_type -2649 69 3 * 552 202 192 120 chr5 157143574 157143866 -45941666 - MLT1G1 LTR MaLR -31 524 212 1010 199 5 38 chr5 157144891 157145102 -45940430 + MER3 DNA MER1_type 2 205 -4 635 214 0 64 chr5 157145295 157145468 -45940064 + L2 LINE L2 3152 3313 0 198 0 0 0 chr5 157145524 157145546 -45939986 + (TG)n Simple_repeat Simple_repeat 1 22 0 264 77 0 0 chr5 157145546 157145585 -45939947 + (GA)n Simple_repeat Simple_repeat 2 40 0 1122 209 47 16 chr5 157145694 157145947 -45939585 - MIR SINE MIR 0 262 2 847 282 117 45 chr5 157146458 157146944 -45938588 + LTR33 LTR ERVL 1 521 0 1724 252 79 163 chr5 157147537 157148141 -45937391 + L2 LINE L2 1457 2110 -1203 1118 145 122 46 chr5 157148141 157148403 -45937129 + MER33 DNA MER1_type 43 324 0 1724 252 79 163 chr5 157148403 157149322 -45936210 + L2 LINE L2 2110 3054 -259 1983 121 10 20 chr5 157149322 157149619 -45935913 - AluSx SINE Alu -18 294 1 1724 252 79 163 chr5 157149619 157149854 -45935678 + L2 LINE L2 3054 3307 -6 381 22 0 0 chr5 157150168 157150214 -45935318 + (TG)n Simple_repeat Simple_repeat 2 47 0 206 308 26 51 chr5 157150300 157150378 -45935154 + L2 LINE L2 3197 3272 0 807 240 28 37 chr5 157151296 157151513 -45934019 - MIR SINE MIR -31 231 17 356 202 22 22 chr5 157151516 157151605 -45933927 - MIR SINE MIR -26 236 148 248 257 198 10 chr5 157151717 157151818 -45933714 + MIR SINE MIR 22 141 -121 2199 99 0 0 chr5 157151865 157152171 -45933361 + AluSg SINE Alu 1 306 0 505 291 76 12 chr5 157152238 157152410 -45933122 + MIR3 SINE MIR 19 201 -7 263 174 0 72 chr5 157153003 157153072 -45932460 + MIR SINE MIR 78 141 -121 1749 99 13 0 chr5 157153178 157153410 -45932122 + AluSq SINE Alu 1 235 -78 835 164 0 8 chr5 157153929 157154063 -45931469 - FLAM_C SINE Alu 0 133 1 273 121 52 35 chr5 157154599 157154657 -45930875 - L1MC4a LINE L1 -1886 5922 5864 1499 112 69 118 chr5 157154713 157155017 -45930515 + AluJo SINE Alu 4 292 -20 2209 113 13 0 chr5 157155023 157155323 -45930209 + AluSx SINE Alu 3 306 -6 2366 84 0 3 chr5 157155325 157155622 -45929910 + AluSp SINE Alu 1 296 -17 1933 115 40 20 chr5 157155689 157155985 -45929547 - AluSx SINE Alu -10 302 1 303 202 36 24 chr5 157156098 157156182 -45929350 - MIR SINE MIR 0 262 178 * 645 249 63 90 chr5 157156164 157156498 -45929034 + L2 LINE L2 2980 3304 -9 473 274 76 13 chr5 157156516 157156673 -45928859 - MIR SINE MIR -86 176 10 235 241 129 26 chr5 157156708 157156824 -45928708 + MIR3 SINE MIR 78 205 -3 648 287 103 81 chr5 157156926 157157849 -45927683 - L2 LINE L2 -2 3270 2302 279 0 0 0 chr5 157158049 157158080 -45927452 + (TG)n Simple_repeat Simple_repeat 2 32 0 212 0 36 0 chr5 157158143 157158171 -45927361 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 195 42 0 0 chr5 157158922 157158946 -45926586 + (CGCTG)n Simple_repeat Simple_repeat 3 26 0 624 135 0 0 chr5 157159174 157159285 -45926247 + (CAG)n Simple_repeat Simple_repeat 3 113 0 246 238 50 40 chr5 157164061 157164162 -45921370 - L1MC4a LINE L1 -1633 6175 6074 2424 79 0 0 chr5 157164242 157164546 -45920986 - AluSg SINE Alu -6 304 1 883 152 0 0 chr5 157167109 157167234 -45918298 - AluJb SINE Alu -187 125 1 1498 215 26 64 chr5 157167325 157167822 -45917710 - L1M4 LINE L1 -1669 4477 4000 549 270 143 48 chr5 157167856 157167914 -45917618 + MIR SINE MIR 9 60 -202 2102 116 7 13 chr5 157167914 157168216 -45917316 + AluY SINE Alu 1 300 -11 549 270 143 48 chr5 157168216 157168387 -45917145 + MIR SINE MIR 60 260 -2 28 0 0 0 chr5 157169102 157169130 -45916402 + AT_rich Low_complexity Low_complexity 1 28 0 310 298 124 0 chr5 157169167 157169288 -45916244 - MIR SINE MIR -18 244 109 21 0 0 0 chr5 157170679 157170700 -45914832 + AT_rich Low_complexity Low_complexity 1 21 0 1088 75 0 0 chr5 157172490 157172624 -45912908 - AluSg/x SINE Alu 0 312 179 498 333 5 10 chr5 157172642 157172834 -45912698 + MIR SINE MIR 55 245 -17 199 319 0 14 chr5 157172906 157172985 -45912547 + MIR SINE MIR 51 128 -80 1088 75 0 0 chr5 157173428 157173562 -45911970 - AluSg/x SINE Alu 0 312 179 784 260 5 10 chr5 157173580 157173772 -45911760 + MIR SINE MIR 55 245 -17 272 345 0 26 chr5 157173807 157173923 -45911609 + MIR SINE MIR 16 128 -80 916 289 114 22 chr5 157173937 157174435 -45911097 - MLT1F1 LTR MaLR -6 561 18 309 196 62 161 chr5 157174444 157174735 -45910797 - MLT1F1-int LTR MaLR -4 1731 1470 1216 170 76 47 chr5 157174810 157175087 -45910445 - L1MC4a LINE L1 -5 7803 7519 1685 91 189 7 chr5 157175360 157175645 -45909887 - MER44D DNA MER2_type -1 608 2 1810 158 13 23 chr5 157175862 157176165 -45909367 + AluJo SINE Alu 1 300 -12 204 405 43 24 chr5 157176258 157176468 -45909064 + L2 LINE L2 2346 2559 -755 1028 208 0 0 chr5 157176518 157176691 -45908841 - FAM SINE Alu -2 173 1 410 331 69 46 chr5 157176710 157177181 -45908351 + L2 LINE L2 2601 3084 -188 315 315 11 0 chr5 157177613 157177705 -45907827 + L2 LINE L2 3216 3308 -5 236 242 88 22 chr5 157178066 157178157 -45907375 + MIR SINE MIR 33 129 -79 2555 40 0 3 chr5 157178591 157178889 -45906643 + AluY SINE Alu 1 297 -14 296 345 154 17 chr5 157179732 157180315 -45905217 - L2 LINE L2 -251 3021 2364 835 230 38 25 chr5 157180343 157180578 -45904954 - MIR SINE MIR -5 257 20 303 343 18 24 chr5 157180819 157180988 -45904544 - L2 LINE L2 -213 3059 2892 456 255 56 77 chr5 157181831 157182027 -45903505 + MIR SINE MIR 21 212 -50 1718 116 8 8 chr5 157183093 157183335 -45902197 + AluSq SINE Alu 1 242 -71 231 327 48 10 chr5 157183377 157183481 -45902051 - MIR SINE MIR -52 210 103 646 111 10 0 chr5 157183555 157183654 -45901878 - HY3 scRNA scRNA -1 100 1 696 288 198 35 chr5 157185185 157186673 -45898859 + L2 LINE L2 1525 3272 0 373 239 68 68 chr5 157186799 157186962 -45898570 - MIR3 SINE MIR -43 165 3 243 315 148 0 chr5 157187605 157187713 -45897819 - L2 LINE L2 -1 3271 3148 193 333 0 0 chr5 157187736 157187796 -45897736 - L2 LINE L2 0 3313 3254 6515 241 93 28 chr5 157187798 157188609 -45896923 - L2 LINE L2 0 3313 2556 1942 169 0 0 chr5 157188609 157188911 -45896621 + AluSx SINE Alu 1 302 -10 6515 241 93 28 chr5 157188911 157189587 -45895945 - L2 LINE L2 -757 2556 1925 1136 90 7 0 chr5 157189587 157189742 -45895790 - L1MB3 LINE L1 -2 6181 6026 6515 241 93 28 chr5 157189742 157190766 -45894766 - L2 LINE L2 -1388 1925 643 412 331 27 72 chr5 157190753 157191046 -45894486 - L2 LINE L2 -73 3199 2920 * 1828 234 83 31 chr5 157191279 157191815 -45893717 - MLT1F1 LTR MaLR -2 565 1 255 318 103 38 chr5 157191986 157192247 -45893285 - L2 LINE L2 -495 2819 2542 3519 111 26 65 chr5 157192528 157192832 -45892700 - L1MC1 LINE L1 0 6333 6066 2133 134 7 0 chr5 157192832 157193130 -45892402 - AluSx SINE Alu -12 300 1 3519 111 26 65 chr5 157193130 157193475 -45892057 - L1MC1 LINE L1 -267 6066 5709 1686 111 25 0 chr5 157193475 157193718 -45891814 + L1MC1 LINE L1 5481 5729 -604 667 237 101 31 chr5 157194131 157194359 -45891173 - MIR SINE MIR -15 247 4 363 161 0 0 chr5 157194719 157194781 -45890751 + L2 LINE L2 3249 3310 -3 285 302 115 0 chr5 157195180 157195319 -45890213 + MIR3 SINE MIR 43 197 -11 1173 188 24 0 chr5 157195933 157196146 -45889386 - MER20 DNA MER1_type 0 219 2 337 269 54 20 chr5 157196293 157196442 -45889090 - L1ME4a LINE L1 -3 6118 5965 1190 209 56 3 chr5 157196515 157196817 -45888715 - L1ME4a LINE L1 -286 5835 5518 2752 218 91 19 chr5 157198178 157198895 -45886637 - L1MC4a LINE L1 -6 7802 7035 571 217 0 0 chr5 157199023 157199138 -45886394 - L1MD3 LINE L1 -36 7959 7845 709 246 37 5 chr5 157199152 157199343 -45886189 - L2 LINE L2 -688 2626 2430 2254 173 105 17 chr5 157199431 157199888 -45885644 - MLT1D LTR MaLR -16 551 1 1581 269 61 67 chr5 157200116 157200936 -45884596 + L2 LINE L2 2386 3210 -103 2035 149 0 3 chr5 157200936 157201245 -45884287 - AluJb SINE Alu -4 308 1 1581 269 61 67 chr5 157201245 157201278 -45884254 + L2 LINE L2 3210 3242 -71 1727 181 0 3 chr5 157201278 157201566 -45883966 - AluJo SINE Alu -25 287 1 1581 269 61 67 chr5 157201566 157201634 -45883898 + L2 LINE L2 3242 3309 -4 227 299 155 40 chr5 157202080 157202358 -45883174 - L2 LINE L2 -397 2917 2608 409 224 109 48 chr5 157203081 157203228 -45882304 - L1ME4a LINE L1 -1 6120 5965 445 281 68 68 chr5 157203801 157204050 -45881482 - LTR16C LTR ERVL -5 486 238 374 265 25 48 chr5 157204888 157205027 -45880505 - MIR SINE MIR -61 147 17 1865 149 0 32 chr5 157205979 157206295 -45879237 - AluJb SINE Alu -6 306 1 746 264 5 48 chr5 157206704 157206971 -45878561 + L1ME4a LINE L1 5693 5914 -207 1737 196 0 6 chr5 157207104 157207415 -45878117 - AluJo SINE Alu -3 309 1 977 140 25 0 chr5 157208496 157208653 -45876879 - L1MB2 LINE L1 -12 6159 5999 831 293 124 30 chr5 157209412 157209970 -45875562 - L2 LINE L2 -5 3308 2688 281 203 45 75 chr5 157210082 157210215 -45875317 + L1MC5 LINE L1 7403 7531 -430 1198 283 120 20 chr5 157210651 157211451 -45874081 + L1ME3 LINE L1 4137 5016 -1130 430 123 0 7 chr5 157211456 157211701 -45873831 + AluSx SINE Alu 7 314 0 1248 257 51 61 chr5 157211703 157211857 -45873675 + L1ME3 LINE L1 5010 5164 -998 2267 91 0 10 chr5 157211857 157212153 -45873379 - AluSg1 SINE Alu -16 293 1 1248 257 51 61 chr5 157212153 157212542 -45872990 + L1ME3 LINE L1 5164 5555 -607 1810 168 0 11 chr5 157212542 157212873 -45872659 + AluSq SINE Alu 2 329 0 1248 257 51 61 chr5 157212873 157213059 -45872473 + L1ME3 LINE L1 5555 5731 -431 2468 75 3 3 chr5 157213059 157213392 -45872140 + AluY SINE Alu 1 333 0 1248 257 51 61 chr5 157213392 157213521 -45872011 + L1ME3 LINE L1 5731 5860 -302 27 29 0 0 chr5 157213561 157213595 -45871937 + AT_rich Low_complexity Low_complexity 1 34 0 440 322 44 15 chr5 157213793 157213998 -45871534 - L2 LINE L2 -623 2691 2481 334 259 53 15 chr5 157213999 157214130 -45871402 - L1ME LINE L1 -318 5803 5668 5548 123 25 0 chr5 157214186 157215041 -45870491 - L1MC1 LINE L1 -9 6324 5449 2521 66 0 3 chr5 157215074 157215375 -45870157 + AluY SINE Alu 1 300 -11 423 198 52 52 chr5 157215383 157215499 -45870033 - L1ME LINE L1 -482 5639 5524 2029 102 43 30 chr5 157215755 157216058 -45869474 - AluSx SINE Alu -5 307 1 1116 150 14 33 chr5 157216293 157216506 -45869026 - MER3 DNA MER1_type 0 209 1 251 200 17 17 chr5 157217196 157217256 -45868276 + MIR SINE MIR 55 114 -94 2143 115 0 0 chr5 157217791 157218069 -45867463 - AluSx SINE Alu -13 299 22 291 354 31 8 chr5 157218294 157218421 -45867111 + MIR SINE MIR 16 145 -63 347 70 0 0 chr5 157218630 157218673 -45866859 + U6 snRNA snRNA 2 44 -63 830 291 27 24 chr5 157218730 157219063 -45866469 - L1ME4a LINE L1 -205 5916 5583 187 283 9 66 chr5 157219399 157219505 -45866027 + MIR SINE MIR 92 191 -71 240 35 0 0 chr5 157223119 157223148 -45862384 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1538 232 98 43 chr5 157223202 157223715 -45861817 - MLT1F LTR MaLR 0 542 2 3889 24 11 4 chr5 157223903 157224369 -45861163 - L1PA4 LINE L1 -1 6154 5686 7343 31 0 34 chr5 157224431 157225671 -45859861 - L1P2 LINE L1 -434 5721 4524 827 149 94 6 chr5 157225880 157226061 -45859471 - L1MC2 LINE L1 -11 6333 6137 482 256 26 19 chr5 157226144 157226300 -45859232 - MIR SINE MIR -98 164 8 240 284 37 0 chr5 157226449 157226530 -45859002 + MIR3 SINE MIR 110 193 -15 613 235 59 16 chr5 157227015 157227202 -45858330 + MIR SINE MIR 60 254 -8 25 0 0 0 chr5 157228548 157228573 -45856959 + AT_rich Low_complexity Low_complexity 1 25 0 289 274 151 16 chr5 157229121 157229307 -45856225 - L1ME4a LINE L1 -39 6082 5872 662 184 7 71 chr5 157229311 157229452 -45856080 + MLT1A1 LTR MaLR 181 312 -53 1911 148 0 14 chr5 157229491 157229781 -45855751 + AluJb SINE Alu 6 291 -21 725 270 93 26 chr5 157229839 157230347 -45855185 - L1ME4a LINE L1 -298 5823 5255 2316 97 3 0 chr5 157230415 157230704 -45854828 - AluSx SINE Alu -20 292 3 653 303 123 31 chr5 157231079 157231565 -45853967 - L1ME4a LINE L1 -1316 4830 4300 254 369 59 31 chr5 157232871 157233126 -45852406 - L3b LINE CR1 -101 1482 1221 210 186 0 0 chr5 157233147 157233190 -45852342 + MIR SINE MIR 194 236 -26 635 306 51 8 chr5 157233606 157233861 -45851671 - L3 LINE CR1 -77 1500 1235 432 0 0 0 chr5 157235135 157235183 -45850349 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2072 97 47 4 chr5 157235188 157235466 -45850066 - AluSc SINE Alu -19 290 1 231 353 59 71 chr5 157236413 157236852 -45848680 + L2 LINE L2 2815 3248 -24 632 259 21 5 chr5 157237020 157237213 -45848319 - L2 LINE L2 0 3313 3118 243 133 0 0 chr5 157238765 157238810 -45846722 + (TG)n Simple_repeat Simple_repeat 1 45 0 467 251 246 0 chr5 157239397 157239588 -45845944 + MIR SINE MIR 13 250 -12 205 376 0 0 chr5 157240360 157240453 -45845079 + MIR SINE MIR 61 153 -109 558 253 37 31 chr5 157242484 157242613 -45842919 - MIR SINE MIR -97 165 33 2124 129 7 0 chr5 157242613 157242916 -45842616 - AluSx SINE Alu -7 305 1 558 253 37 31 chr5 157242916 157242948 -45842584 - MIR SINE MIR -229 33 3 2271 106 0 22 chr5 157243336 157243473 -45842059 + AluSx SINE Alu 1 140 -172 2232 95 3 0 chr5 157243473 157243781 -45841751 + AluSp SINE Alu 1 309 0 2271 106 0 22 chr5 157243781 157243954 -45841578 + AluSx SINE Alu 140 305 -7 315 239 62 26 chr5 157244177 157244290 -45841242 + MIR3 SINE MIR 69 185 -23 396 0 0 0 chr5 157245795 157245839 -45839693 + (CA)n Simple_repeat Simple_repeat 1 44 0 226 184 0 0 chr5 157245860 157245898 -45839634 + L3b LINE CR1 1278 1315 -268 505 320 62 69 chr5 157247689 157248139 -45837393 + L2 LINE L2 2826 3272 0 460 194 105 16 chr5 157248256 157248380 -45837152 - MIR SINE MIR 0 262 128 282 193 0 0 chr5 157250340 157250397 -45835135 + (CA)n Simple_repeat Simple_repeat 1 57 0 777 267 15 0 chr5 157250960 157251155 -45834377 - MIR SINE MIR -12 250 53 226 180 20 20 chr5 157251782 157251832 -45833700 + L1MCc LINE L1 803 852 -5571 254 182 91 0 chr5 157251922 157251988 -45833544 - MIR SINE MIR -120 142 71 220 286 36 45 chr5 157252032 157252144 -45833388 + MIR3 SINE MIR 3 113 -95 230 310 11 11 chr5 157253576 157253663 -45831869 + L1ME4a LINE L1 5956 6042 -79 442 350 112 0 chr5 157254246 157254532 -45831000 + L2 LINE L2 2463 2780 -534 1737 148 25 16 chr5 157254950 157255268 -45830264 + L1MB3 LINE L1 5863 6183 0 4261 166 67 12 chr5 157255272 157256084 -45829448 + L1MB8 LINE L1 5317 6172 -6 4814 196 13 35 chr5 157256087 157257495 -45828037 - L1ME LINE L1 -629 5541 4201 * 6510 135 48 8 chr5 157257485 157258988 -45826544 + L1MA5A LINE L1 4594 6244 -53 272 208 10 52 chr5 157258986 157259082 -45826450 - L1ME LINE L1 -1907 4239 4148 * 10790 180 51 26 chr5 157259129 157259714 -45825818 + Cheshire DNA MER1_type 94 663 -1757 2325 99 0 10 chr5 157259714 157260017 -45825515 + AluSg SINE Alu 1 300 -10 1852 174 7 0 chr5 157260021 157260315 -45825217 + AluSx SINE Alu 1 296 -16 10790 180 51 26 chr5 157260315 157261988 -45823544 + Cheshire DNA MER1_type 665 2414 -6 350 321 21 77 chr5 157262010 157262297 -45823235 + L2 LINE L2 2837 3107 -165 459 266 71 6 chr5 157262436 157262605 -45822927 - L1MC4a LINE L1 -1813 5995 5816 3064 196 96 26 chr5 157262609 157263585 -45821947 - L1ME1 LINE L1 -8 6227 5155 2075 154 3 0 chr5 157263586 157263897 -45821635 + AluSx SINE Alu 1 312 0 1573 244 56 59 chr5 157264018 157264104 -45821428 + L1M4 LINE L1 2128 2213 -3933 2271 122 0 0 chr5 157264104 157264408 -45821124 + AluSx SINE Alu 1 304 -8 1573 244 56 59 chr5 157264408 157265028 -45820504 + L1M4 LINE L1 2213 2834 -3312 1955 146 20 7 chr5 157265028 157265330 -45820202 + AluJb SINE Alu 1 306 -6 1573 244 56 59 chr5 157265330 157265352 -45820180 + L1M4 LINE L1 2834 2855 -3291 * 4842 229 57 19 chr5 157265346 157265993 -45819539 + L1MEc LINE L1 1816 2437 -3778 2298 91 0 19 chr5 157265993 157266302 -45819230 + AluSx SINE Alu 1 303 -9 4842 229 57 19 chr5 157266302 157266788 -45818744 + L1MEc LINE L1 2437 2903 -3312 2199 138 3 0 chr5 157266788 157267099 -45818433 + AluSx SINE Alu 1 312 0 4842 229 57 19 chr5 157267099 157267883 -45817649 + L1MEc LINE L1 2903 3837 -2378 24 0 0 0 chr5 157267889 157267913 -45817619 + AT_rich Low_complexity Low_complexity 1 24 0 1135 183 9 9 chr5 157267924 157268154 -45817378 - AluSg SINE Alu -24 286 57 848 284 8 11 chr5 157268473 157268741 -45816791 + AluSx SINE Alu 22 288 -24 270 73 0 0 chr5 157268783 157268824 -45816708 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 7489 180 70 143 chr5 157268824 157268960 -45816572 - L1ME1 LINE L1 -1053 5162 5018 959 45 0 56 chr5 157268960 157269138 -45816394 + (TTCC)n Simple_repeat Simple_repeat 2 169 0 7489 180 70 143 chr5 157269138 157269226 -45816306 - L1ME1 LINE L1 -1197 5018 4925 261 0 0 0 chr5 157269226 157269255 -45816277 + (TC)n Simple_repeat Simple_repeat 2 30 0 7489 180 70 143 chr5 157269255 157269449 -45816083 - L1ME1 LINE L1 -1290 4925 4718 1631 167 31 31 chr5 157269449 157269743 -45815789 + AluJo SINE Alu 1 294 -18 7489 180 70 143 chr5 157269743 157270005 -45815527 - L1ME1 LINE L1 -1497 4718 4438 977 173 0 6 chr5 157270005 157270173 -45815359 - FRAM SINE Alu -8 168 2 7489 180 70 143 chr5 157270173 157271004 -45814528 - L1ME1 LINE L1 -1777 4438 3548 2237 111 0 0 chr5 157271004 157271292 -45814240 + AluSx SINE Alu 1 288 -24 7489 180 70 143 chr5 157271292 157272117 -45813415 - L1ME1 LINE L1 -2667 3548 2664 2242 132 3 0 chr5 157272117 157272428 -45813104 - AluSx SINE Alu 0 312 1 7489 180 70 143 chr5 157272428 157272914 -45812618 - L1ME1 LINE L1 -3551 2664 2510 2314 87 0 19 chr5 157272914 157273223 -45812309 - AluSx SINE Alu -9 303 1 7489 180 70 143 chr5 157273223 157273871 -45811661 - L1ME1 LINE L1 -3705 2510 1816 1638 244 55 58 chr5 157273865 157273887 -45811645 - L1M4 LINE L1 -3291 2855 2834 * 1984 142 20 7 chr5 157273887 157274189 -45811343 - AluJb SINE Alu -6 306 1 1638 244 55 58 chr5 157274189 157274809 -45810723 - L1M4 LINE L1 -3312 2834 2213 2317 112 0 0 chr5 157274809 157275113 -45810419 - AluSx SINE Alu -8 304 1 1638 244 55 58 chr5 157275113 157275199 -45810333 - L1M4 LINE L1 -3933 2213 2128 23 0 0 0 chr5 157275199 157275222 -45810310 + AT_rich Low_complexity Low_complexity 1 23 0 3654 198 37 25 chr5 157275359 157275843 -45809689 - L1MA9 LINE L1 -38 6274 5773 306 0 0 0 chr5 157275843 157275877 -45809655 + (CA)n Simple_repeat Simple_repeat 2 35 0 3654 198 37 25 chr5 157275877 157276250 -45809282 - L1MA9 LINE L1 -539 5773 5406 507 231 137 57 chr5 157276266 157276552 -45808980 - L1ME1 LINE L1 -4742 1394 849 558 283 35 58 chr5 157276888 157277114 -45808418 - MIR SINE MIR -17 245 25 2109 92 0 0 chr5 157280312 157280572 -45804960 - AluSp SINE Alu -8 305 46 298 316 6 71 chr5 157284478 157284646 -45800886 - MIR3 SINE MIR -13 195 39 6789 165 15 24 chr5 157284810 157286000 -45799532 - L1MC1 LINE L1 0 6333 5177 1980 147 0 28 chr5 157286000 157286319 -45799213 - AluJo SINE Alu -2 310 1 6789 165 15 24 chr5 157286319 157287204 -45798328 - L1MC1 LINE L1 -1156 5177 4285 270 0 0 0 chr5 157287316 157287346 -45798186 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 193 106 0 64 chr5 157287779 157287826 -45797706 - MIR SINE MIR -43 219 176 189 308 221 26 chr5 157289080 157289509 -45796023 + L2 LINE L2 1945 2457 -857 203 228 13 63 chr5 157289515 157289594 -45795938 + MIR SINE MIR 92 166 -96 1681 171 22 106 chr5 157289964 157290547 -45794985 + L1MB8 LINE L1 4896 5440 -738 2192 149 0 0 chr5 157290547 157290855 -45794677 + AluJb SINE Alu 1 308 -4 559 32 0 75 chr5 157290867 157290960 -45794572 + L1MB8 LINE L1 6093 6178 0 3888 159 13 28 chr5 157290960 157291718 -45793814 + L1MB8 LINE L1 5428 6177 -1 197 300 44 11 chr5 157291852 157291942 -45793590 - MER5A DNA MER1_type -47 142 50 209 392 49 7 chr5 157291973 157292116 -45793416 + L2 LINE L2 2619 2767 -547 1882 144 20 23 chr5 157293922 157294228 -45791304 - AluJb SINE Alu -7 305 1 278 300 158 0 chr5 157294332 157294452 -45791080 + L2 LINE L2 3159 3297 -16 315 388 18 18 chr5 157295202 157295372 -45790160 - MIR3 SINE MIR -26 182 13 270 125 0 0 chr5 157295720 157295768 -45789764 + (GGCTG)n Simple_repeat Simple_repeat 1 48 0 397 290 91 16 chr5 157296754 157296940 -45788592 - MIR3 SINE MIR -6 202 3 816 207 25 20 chr5 157299423 157299621 -45785911 + MIR SINE MIR 1 199 -63 616 359 4 4 chr5 157299944 157300195 -45785337 + MIR SINE MIR 2 252 -10 693 200 0 62 chr5 157303883 157304043 -45781489 + MER5A DNA MER1_type 40 189 0 249 282 190 12 chr5 157304474 157304637 -45780895 - L2 LINE L2 -518 2796 2605 300 179 75 0 chr5 157304791 157304858 -45780674 - MIR3 SINE MIR -34 174 103 318 316 88 6 chr5 157304971 157305142 -45780390 + L2 LINE L2 2883 3067 -205 592 261 72 27 chr5 157306167 157306389 -45779143 - MIR SINE MIR 0 262 31 187 432 0 0 chr5 157306890 157307001 -45778531 - L2 LINE L2 -902 2412 2302 346 312 22 29 chr5 157307880 157308018 -45777514 - MIR3 SINE MIR -68 140 4 242 224 0 17 chr5 157309719 157309777 -45775755 + L1MC/D LINE L1 5695 5751 -2057 217 263 70 0 chr5 157310081 157310138 -45775394 + L2 LINE L2 3235 3295 -18 272 396 20 7 chr5 157310514 157310663 -45774869 + L3 LINE CR1 1244 1394 -183 419 101 0 0 chr5 157311120 157311189 -45774343 - Charlie5 DNA MER1_type -27 2585 2517 302 372 26 16 chr5 157311207 157311398 -45774134 + L2 LINE L2 2765 2957 -357 223 115 0 77 chr5 157311488 157311540 -45773992 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 401 181 0 24 chr5 157312150 157312233 -45773299 + L1ME3A LINE L1 6080 6160 -10 301 326 42 21 chr5 157312237 157312381 -45773151 - MER5B DNA MER1_type -28 150 4 180 489 0 0 chr5 157312548 157312638 -45772894 + A-rich Low_complexity Low_complexity 1 90 0 1225 251 66 18 chr5 157312721 157313115 -45772417 + L1ME4a LINE L1 5266 5678 -443 737 252 78 30 chr5 157313119 157313349 -45772183 - MIR SINE MIR 0 262 22 403 308 44 0 chr5 157313373 157313532 -45772000 + L1ME4a LINE L1 5670 5835 -286 209 203 250 0 chr5 157314091 157314155 -45771377 + MIR SINE MIR 183 262 0 307 295 42 0 chr5 157314211 157314306 -45771226 + L1ME4a LINE L1 6006 6104 -17 379 277 0 0 chr5 157314683 157314777 -45770755 + MIR SINE MIR 44 137 -71 216 0 0 0 chr5 157314940 157314964 -45770568 + (TG)n Simple_repeat Simple_repeat 2 25 0 458 264 128 5 chr5 157315160 157315365 -45770167 + MIR SINE MIR 24 249 -13 393 242 58 33 chr5 157318271 157318391 -45767141 - L2 LINE L2 0 3313 3191 180 239 43 0 chr5 157318551 157318597 -45766935 - L2 LINE L2 -2 3311 3264 248 301 88 7 chr5 157318689 157318825 -45766707 + L2 LINE L2 2917 3063 -209 290 270 0 0 chr5 157321353 157321427 -45764105 + MIR SINE MIR 66 139 -69 328 182 30 0 chr5 157321477 157321543 -45763989 + L2 LINE L2 3205 3272 0 232 322 11 0 chr5 157323970 157324046 -45761486 - MIR SINE MIR -66 142 62 352 303 71 0 chr5 157324074 157324173 -45761359 + L2 LINE L2 3151 3256 -16 510 256 121 109 chr5 157324386 157324956 -45760576 - MLT1K LTR MaLR -2 586 10 483 264 162 0 chr5 157325179 157325346 -45760186 + MIR3 SINE MIR 8 201 -7 351 0 0 0 chr5 157326117 157326156 -45759376 + (CA)n Simple_repeat Simple_repeat 2 40 0 186 250 0 62 chr5 157326337 157326401 -45759131 - L2 LINE L2 -221 3051 2992 3784 130 66 33 chr5 157326570 157327293 -45758239 - L1MB7 LINE L1 0 6184 5438 724 134 0 17 chr5 157327308 157327427 -45758105 - FLAM_C SINE Alu -14 129 13 240 83 0 0 chr5 157327440 157327476 -45758056 - L1MB7 LINE L1 -732 5442 5407 690 207 20 27 chr5 157327619 157327769 -45757763 - L2 LINE L2 0 3313 3165 2010 106 0 4 chr5 157327772 157328028 -45757504 + AluSc SINE Alu 1 255 -54 1064 298 122 19 chr5 157328261 157328842 -45756690 - L2 LINE L2 -376 2938 2298 210 242 0 0 chr5 157331729 157331795 -45753737 + CT-rich Low_complexity Low_complexity 1 66 0 612 27 0 0 chr5 157335298 157335372 -45750160 + (CA)n Simple_repeat Simple_repeat 1 74 0 314 101 38 13 chr5 157337696 157337775 -45747757 + T-rich Low_complexity Low_complexity 2 82 0 210 37 0 0 chr5 157338351 157338378 -45747154 + (TG)n Simple_repeat Simple_repeat 1 27 0 213 213 0 0 chr5 157338730 157338777 -45746755 + A-rich Low_complexity Low_complexity 1 47 0 516 297 80 14 chr5 157339842 157340054 -45745478 + MIR SINE MIR 3 228 -34 222 401 0 0 chr5 157340326 157340468 -45745064 + (CA)n Simple_repeat Simple_repeat 1 142 0 354 266 28 9 chr5 157341060 157341169 -45744363 + MIR SINE MIR 25 135 -73 239 176 55 99 chr5 157342089 157342180 -45743352 - MER5B DNA MER1_type -16 162 76 227 298 0 0 chr5 157343128 157343205 -45742327 + CT-rich Low_complexity Low_complexity 4 131 0 1170 293 71 39 chr5 157344588 157345445 -45740087 - L2 LINE L2 -88 3225 2342 450 249 102 41 chr5 157345512 157345757 -45739775 + L1MC/D LINE L1 5323 5582 -2226 549 279 166 20 chr5 157345766 157346175 -45739357 - L2 LINE L2 -1044 2270 1802 268 280 20 0 chr5 157346244 157346344 -45739188 + (TG)n Simple_repeat Simple_repeat 1 102 0 387 259 237 7 chr5 157347683 157347822 -45737710 + MIR SINE MIR 13 183 -79 205 286 71 0 chr5 157348700 157348756 -45736776 - L2 LINE L2 0 3272 3213 395 304 29 66 chr5 157348810 157349053 -45736479 - L2 LINE L2 -198 3074 2841 1916 84 57 102 chr5 157349088 157349459 -45736073 - L1MA2 LINE L1 0 6304 5951 197 286 18 0 chr5 157349459 157349515 -45736017 - L2 LINE L2 -565 2749 2693 443 308 72 26 chr5 157349576 157349771 -45735761 + L2 LINE L2 3108 3311 -2 476 288 89 7 chr5 157349791 157349937 -45735595 - MIR SINE MIR -40 222 65 349 287 22 11 chr5 157351683 157351789 -45733743 - MIR SINE MIR -62 146 43 422 234 8 62 chr5 157351804 157351899 -45733633 + MER94 DNA DNA 5 93 -41 2071 107 7 7 chr5 157351899 157352207 -45733325 + AluSx SINE Alu 1 308 -4 422 234 8 62 chr5 157352207 157352239 -45733293 + MER94 DNA DNA 93 125 -9 197 242 66 77 chr5 157352633 157352724 -45732808 - L2 LINE L2 -30 3242 3153 406 327 103 23 chr5 157352813 157353027 -45732505 + MIR SINE MIR 29 259 -3 218 344 30 23 chr5 157353772 157353903 -45731629 + L3 LINE CR1 1348 1479 -98 240 299 0 15 chr5 157353914 157353981 -45731551 + MIR SINE MIR 23 88 -174 189 0 0 0 chr5 157357090 157357111 -45728421 + (T)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr5 157357218 157357240 -45728292 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 157357772 157357793 -45727739 + AT_rich Low_complexity Low_complexity 1 21 0 211 229 0 0 chr5 157358654 157358702 -45726830 + T-rich Low_complexity Low_complexity 1 48 0 285 109 0 0 chr5 157358715 157358761 -45726771 + (TG)n Simple_repeat Simple_repeat 1 46 0 203 158 0 0 chr5 157358834 157358872 -45726660 + (CTG)n Simple_repeat Simple_repeat 2 39 0 363 105 0 0 chr5 157359603 157359660 -45725872 + (CCG)n Simple_repeat Simple_repeat 1 57 0 182 125 31 31 chr5 157359760 157359824 -45725708 + (CCG)n Simple_repeat Simple_repeat 3 66 0 298 183 11 54 chr5 157359970 157360063 -45725469 + (CCCG)n Simple_repeat Simple_repeat 2 90 0 312 91 0 0 chr5 157360137 157360181 -45725351 + (CCA)n Simple_repeat Simple_repeat 2 45 0 209 266 26 18 chr5 157365715 157365828 -45719704 + (CGGG)n Simple_repeat Simple_repeat 1 114 0 189 0 0 0 chr5 157366081 157366102 -45719430 + (CCG)n Simple_repeat Simple_repeat 3 23 0 181 267 50 0 chr5 157367282 157367342 -45718190 - MIR SINE MIR -108 154 92 22 0 0 0 chr5 157368504 157368526 -45717006 + AT_rich Low_complexity Low_complexity 1 22 0 1531 149 42 0 chr5 157369143 157369405 -45716127 + AluJb SINE Alu 1 273 -39 417 290 57 27 chr5 157369519 157369816 -45715716 + L1MC4 LINE L1 4950 5255 -891 1836 151 3 31 chr5 157369831 157370173 -45715359 - AluJo SINE Alu 0 333 1 659 194 14 60 chr5 157370186 157370402 -45715130 + L1MC4 LINE L1 5273 5478 -2330 1290 91 116 5 chr5 157370404 157370603 -45714929 + AluSc SINE Alu 82 302 -7 1537 133 155 0 chr5 157370622 157370895 -45714637 + MLT1A1 LTR MaLR 6 321 -44 1515 148 56 133 chr5 157370895 157371272 -45714260 - MER7A DNA MER2_type 0 346 1 604 251 12 78 chr5 157371309 157371552 -45713980 + L1MC4 LINE L1 5481 5707 -2101 * 639 174 31 89 chr5 157371550 157371670 -45713862 - L1MC/D LINE L1 -2326 5482 5379 2343 60 7 7 chr5 157371670 157371970 -45713562 - AluY SINE Alu -11 300 1 639 174 31 89 chr5 157371970 157372073 -45713459 - L1MC/D LINE L1 -2429 5379 5272 299 134 0 0 chr5 157372080 157372126 -45713406 + Alu SINE Alu 1 40 -262 3370 248 86 63 chr5 157372153 157373446 -45712086 + L1MC4 LINE L1 5705 6966 -1076 832 163 180 34 chr5 157373446 157373685 -45711847 - ORSL DNA AcHobo 0 275 2 3370 248 86 63 chr5 157373685 157374381 -45711151 + L1MC4 LINE L1 6966 7644 -398 1007 177 46 149 chr5 157374381 157374709 -45710823 + AluJb SINE Alu 2 295 -7 3370 248 86 63 chr5 157374709 157374747 -45710785 + L1MC4 LINE L1 7644 7680 -362 264 30 0 0 chr5 157374747 157374780 -45710752 + (TG)n Simple_repeat Simple_repeat 2 34 0 3370 248 86 63 chr5 157374780 157374893 -45710639 + L1MC4 LINE L1 7680 8039 -3 255 377 0 0 chr5 157374967 157375113 -45710419 - L1ME LINE L1 -252 5869 5724 696 238 98 5 chr5 157375124 157375317 -45710215 + MIR SINE MIR 1 211 -51 1735 168 7 10 chr5 157375317 157375627 -45709905 + AluJb SINE Alu 1 309 -3 872 259 71 16 chr5 157375627 157375936 -45709596 + L1ME3 LINE L1 5535 5860 -302 26 30 0 0 chr5 157375976 157376009 -45709523 + AT_rich Low_complexity Low_complexity 1 33 0 523 312 44 15 chr5 157376207 157376412 -45709120 - L2 LINE L2 -623 2691 2481 312 248 70 16 chr5 157376413 157376542 -45708990 - L1ME LINE L1 -318 5803 5668 5105 131 40 2 chr5 157376606 157377446 -45708086 - L1MC1 LINE L1 -13 6320 5449 403 191 9 57 chr5 157377476 157377581 -45707951 - L1ME LINE L1 -482 5639 5540 1208 186 0 4 chr5 157377581 157377807 -45707725 + AluJb SINE Alu 84 308 -4 219 260 0 0 chr5 157377807 157377857 -45707675 + MIR SINE MIR 210 259 -3 262 296 20 31 chr5 157378331 157378429 -45707103 + L2 LINE L2 2368 2464 -850 303 322 53 60 chr5 157378445 157378858 -45706674 - L1M4 LINE L1 -3314 2832 2423 1499 89 5 0 chr5 157378858 157379061 -45706471 + AluSp SINE Alu 93 296 -17 2251 93 3 0 chr5 157379095 157379406 -45706126 + AluSx SINE Alu 1 312 0 1672 205 24 4 chr5 157379519 157379992 -45705540 - L1ME LINE L1 -562 5604 5121 1811 159 26 0 chr5 157380350 157380652 -45704880 - AluSx SINE Alu -2 310 1 613 189 16 39 chr5 157380780 157380907 -45704625 - FLAM_A SINE Alu -9 124 1 24 53 0 0 chr5 157381168 157381206 -45704326 + AT_rich Low_complexity Low_complexity 1 38 0 221 167 24 0 chr5 157381434 157381476 -45704056 + CT-rich Low_complexity Low_complexity 3 45 0 331 290 77 52 chr5 157381789 157381944 -45703588 + MIR SINE MIR 8 166 -96 1761 125 81 0 chr5 157382063 157382335 -45703197 + AluSg SINE Alu 1 294 -16 356 165 311 19 chr5 157382876 157382979 -45702553 - FLAM_A SINE Alu 0 133 1 328 261 92 56 chr5 157382979 157383052 -45702480 + L1MC/D LINE L1 5602 5671 -2137 236 54 54 0 chr5 157383052 157383089 -45702443 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 328 261 92 56 chr5 157383089 157383210 -45702322 + L1MC/D LINE L1 5671 5803 -2005 31 0 0 0 chr5 157383215 157383246 -45702286 + AT_rich Low_complexity Low_complexity 1 31 0 853 138 27 185 chr5 157383444 157383687 -45701845 + MER58A DNA MER1_type 3 204 -2216 1779 167 0 3 chr5 157383687 157383987 -45701545 + AluJb SINE Alu 2 300 -12 853 138 27 185 chr5 157383987 157384003 -45701529 + MER58A DNA MER1_type 204 221 -3 314 291 12 0 chr5 157384209 157384295 -45701237 - L2 LINE L2 0 3313 3227 601 114 0 0 chr5 157384295 157384374 -45701158 + LTR69 LTR ERVL 1 79 -509 459 273 19 32 chr5 157384427 157384581 -45700951 - MIR SINE MIR -37 225 74 2545 211 58 30 chr5 157384601 157384647 -45700885 + MLT1F1 LTR MaLR 18 61 -506 1765 148 0 70 chr5 157384647 157384793 -45700739 + AluJb SINE Alu 1 113 -199 2274 69 3 7 chr5 157384793 157385084 -45700448 + AluY SINE Alu 1 290 -21 1765 148 0 70 chr5 157385084 157385267 -45700265 + AluJb SINE Alu 113 307 -5 2545 211 58 30 chr5 157385267 157385755 -45699777 + MLT1F1 LTR MaLR 61 567 0 1272 152 57 0 chr5 157385784 157385995 -45699537 - MER58A DNA MER1_type -1 223 1 2157 134 0 0 chr5 157386116 157386408 -45699124 + AluSx SINE Alu 5 296 -16 1127 229 52 18 chr5 157386984 157387240 -45698292 - MIR SINE MIR 0 262 1 1009 186 62 88 chr5 157388387 157388684 -45696848 - MER96B DNA MER1_type? 0 417 129 1932 147 0 25 chr5 157388684 157389003 -45696529 - AluJo SINE Alu -1 311 1 1009 186 62 88 chr5 157389003 157389059 -45696473 - MER96B DNA MER1_type? -288 129 73 2311 94 13 0 chr5 157390357 157390655 -45694877 + AluSx SINE Alu 1 302 -10 265 303 44 44 chr5 157390987 157391281 -45694251 + L1ME4a LINE L1 5651 5944 -177 814 162 0 29 chr5 157391608 157391744 -45693788 + FLAM_C SINE Alu 1 132 -1 506 308 16 16 chr5 157391773 157391955 -45693577 + MLT1K LTR MaLR 399 580 -8 2044 128 3 32 chr5 157392338 157392651 -45692881 - AluSq SINE Alu -9 304 1 2244 100 7 0 chr5 157392954 157393244 -45692288 + AluSq SINE Alu 5 296 -17 2344 90 3 10 chr5 157393313 157393623 -45691909 + AluSc SINE Alu 1 308 -1 568 246 143 36 chr5 157393741 157393965 -45691567 - MIR SINE MIR 0 262 15 683 145 111 0 chr5 157394666 157394783 -45690749 - FLAM_C SINE Alu -3 130 1 566 253 43 9 chr5 157394901 157395134 -45690398 + L1M4 LINE L1 3662 3902 -2244 1630 254 50 27 chr5 157395151 157395916 -45689616 - L2 LINE L2 0 3313 2533 711 314 75 36 chr5 157395977 157396480 -45689052 - HAL1 LINE L1 -1832 675 153 739 261 17 17 chr5 157396667 157396843 -45688689 - MLT1F1 LTR MaLR -223 344 169 1769 159 42 14 chr5 157396843 157397201 -45688331 - L1MB8 LINE L1 0 6178 5811 2414 68 3 3 chr5 157397265 157397559 -45687973 - AluSq SINE Alu -19 294 1 461 221 228 0 chr5 157397709 157397836 -45687696 - MLT1F1 LTR MaLR -382 160 5 1792 144 4 0 chr5 157398863 157399119 -45686413 + AluSx SINE Alu 3 259 -53 317 128 0 0 chr5 157399119 157399166 -45686366 - L1MB8 LINE L1 -190 5988 5942 772 269 92 50 chr5 157399616 157400012 -45685520 + L1ME3A LINE L1 5425 5864 -306 1942 139 24 3 chr5 157400346 157400641 -45684891 + AluSx SINE Alu 1 301 -11 491 45 0 30 chr5 157400780 157400846 -45684686 - L1PA5 LINE L1 -6 6148 6085 423 118 0 0 chr5 157401003 157401071 -45684461 + AluSx SINE Alu 242 309 -2 2445 81 0 7 chr5 157401144 157401451 -45684081 + AluSq SINE Alu 1 305 -8 263 350 33 0 chr5 157401551 157401671 -45683861 - L2 LINE L2 0 3272 3149 880 262 20 25 chr5 157401921 157402165 -45683367 - MIR SINE MIR -11 251 9 2298 103 0 13 chr5 157403066 157403353 -45682179 + AluSp SINE Alu 1 285 -28 459 0 0 0 chr5 157403353 157403404 -45682128 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2298 103 0 13 chr5 157403404 157403426 -45682106 + AluSp SINE Alu 285 306 -7 2330 102 0 3 chr5 157403428 157403731 -45681801 + AluSc SINE Alu 1 302 -7 1538 184 3 55 chr5 157403755 157403938 -45681594 - AluJo SINE Alu -18 294 132 2435 73 7 0 chr5 157403938 157404240 -45681292 + AluY SINE Alu 2 305 -6 1538 184 3 55 chr5 157404240 157404366 -45681166 - AluJo SINE Alu -180 132 1 7006 83 40 11 chr5 157404572 157405580 -45679952 - L1MA5A LINE L1 0 6297 5261 587 242 73 0 chr5 157406014 157406192 -45679340 + MIR SINE MIR 56 246 -16 763 194 201 48 chr5 157406276 157406461 -45679071 - MER46C DNA MER2_type 0 338 183 2115 118 24 3 chr5 157406461 157406750 -45678782 - AluSx SINE Alu -17 295 1 763 194 201 48 chr5 157406750 157406857 -45678675 - MER46C DNA MER2_type -155 183 1 639 237 139 80 chr5 157407095 157407432 -45678100 + L2 LINE L2 2955 3311 -2 1555 158 102 0 chr5 157407687 157408010 -45677522 - L1MA4 LINE L1 0 6300 5945 230 158 0 0 chr5 157408010 157408048 -45677484 - Alu SINE Alu -265 38 1 2555 139 30 5 chr5 157408048 157408480 -45677052 - L1MA4 LINE L1 -469 5831 5389 1050 174 36 5 chr5 157416328 157416547 -45668985 - L1MA4 LINE L1 -9 6291 6066 2047 126 16 10 chr5 157417100 157417410 -45668122 + AluSx SINE Alu 1 312 0 670 294 74 17 chr5 157418794 157419025 -45666507 - MIR SINE MIR -17 245 2 798 161 167 0 chr5 157419904 157420066 -45665466 + MER5A DNA MER1_type 1 189 0 979 179 56 6 chr5 157421139 157421318 -45664214 - MER5A DNA MER1_type -1 188 1 508 250 16 0 chr5 157421336 157421464 -45664068 - MER94 DNA DNA -1 133 4 897 283 102 16 chr5 157421477 157422095 -45663437 + L2 LINE L2 2619 3303 -10 527 264 61 35 chr5 157423132 157423363 -45662169 + MIR SINE MIR 16 252 -10 1792 87 18 0 chr5 157423495 157423724 -45661808 + AluSg/x SINE Alu 67 299 -13 246 259 12 25 chr5 157424235 157424316 -45661216 + Charlie4 DNA MER1_type 1882 1961 0 2243 104 3 3 chr5 157425477 157425776 -45659756 + AluSg SINE Alu 1 299 -11 812 277 89 36 chr5 157426414 157427074 -45658458 - L1M4 LINE L1 -944 5202 4508 279 355 59 0 chr5 157429277 157429463 -45656069 - MIR SINE MIR -3 259 63 2384 109 0 0 chr5 157431710 157432022 -45653510 - AluSx SINE Alu 0 312 1 180 0 0 0 chr5 157432077 157432097 -45653435 + (T)n Simple_repeat Simple_repeat 1 20 0 200 184 0 0 chr5 157433036 157433074 -45652458 + (CGG)n Simple_repeat Simple_repeat 3 40 0 22 0 0 0 chr5 157434056 157434078 -45651454 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr5 157434209 157434240 -45651292 + (GTTTG)n Simple_repeat Simple_repeat 4 34 0 308 312 37 18 chr5 157435221 157435330 -45650202 - L2 LINE L2 -19 3253 3143 277 245 31 71 chr5 157435342 157435440 -45650092 - L2 LINE L2 0 3272 3179 2346 82 0 0 chr5 157436083 157436374 -45649158 - AluY SINE Alu 0 311 21 613 246 72 18 chr5 157437912 157438079 -45647453 - MIR SINE MIR -66 196 21 219 246 88 0 chr5 157438743 157438800 -45646732 - MIR SINE MIR -79 183 122 223 237 0 34 chr5 157440296 157440355 -45645177 + C-rich Low_complexity Low_complexity 1 57 0 521 214 79 21 chr5 157440743 157440883 -45644649 - MIR SINE MIR -12 250 103 548 270 0 8 chr5 157441672 157441798 -45643734 + MIR SINE MIR 19 143 -119 2038 86 0 89 chr5 157441855 157442181 -45643351 + AluSp SINE Alu 1 297 -16 571 274 126 27 chr5 157442184 157442407 -45643125 - MIR SINE MIR -1 261 17 195 245 0 0 chr5 157442815 157442864 -45642668 + L2 LINE L2 2994 3042 -230 324 120 0 0 chr5 157443331 157443381 -45642151 + (CAG)n Simple_repeat Simple_repeat 1 50 0 526 352 43 12 chr5 157443395 157443648 -45641884 - MIR SINE MIR 0 262 2 571 253 139 37 chr5 157443822 157444067 -45641465 - L2 LINE L2 -21 3292 3023 2400 54 0 31 chr5 157444892 157445209 -45640323 + AluSx SINE Alu 1 307 -5 1205 76 0 0 chr5 157445211 157445368 -45640164 + AluSg/x SINE Alu 137 293 -17 2465 47 0 0 chr5 157445368 157445665 -45639867 + AluY SINE Alu 1 297 -14 2154 80 3 7 chr5 157446010 157446298 -45639234 + AluSp SINE Alu 15 301 -12 342 289 54 20 chr5 157446315 157446464 -45639068 + MIR SINE MIR 109 262 0 506 317 98 0 chr5 157446917 157447081 -45638451 + MIR SINE MIR 83 262 0 267 283 113 46 chr5 157447317 157447557 -45637975 - L1MC4 LINE L1 -97 7945 7690 502 163 82 0 chr5 157447582 157447680 -45637852 - L1MD2 LINE L1 -11 6348 6243 501 90 0 0 chr5 157447687 157447754 -45637778 - MADE1 DNA Mariner -12 68 2 2339 211 64 76 chr5 157447784 157448058 -45637474 - L1MD2 LINE L1 -193 6166 5890 1965 94 0 0 chr5 157448058 157448324 -45637208 - AluSc SINE Alu 0 309 44 2339 211 64 76 chr5 157448324 157448787 -45636745 - L1MD2 LINE L1 -469 5890 5438 1435 114 19 0 chr5 157448792 157449003 -45636529 - AluSg/x SINE Alu -17 295 81 1246 228 148 30 chr5 157449013 157449053 -45636479 + L2 LINE L2 2697 2731 -582 1949 123 3 63 chr5 157449053 157449385 -45636147 - AluJb SINE Alu 0 312 1 1246 228 148 30 chr5 157449385 157449888 -45635644 + L2 LINE L2 2731 3310 -3 603 305 47 29 chr5 157450053 157450332 -45635200 + LTR16C LTR ERVL 151 434 -57 621 197 112 37 chr5 157450471 157450625 -45634907 + L1ME2 LINE L1 4887 5059 -1087 2229 96 6 10 chr5 157450625 157450937 -45634595 + AluSq SINE Alu 2 312 -1 621 197 112 37 chr5 157450937 157450970 -45634562 + L1ME2 LINE L1 5059 5088 -1058 3058 188 32 16 chr5 157450999 157451460 -45634072 + L1ME2 LINE L1 5175 5654 -510 1890 178 46 48 chr5 157451460 157451915 -45633617 + MSTB2 LTR MaLR 4 457 0 3058 188 32 16 chr5 157451915 157452217 -45633315 + L1ME2 LINE L1 5654 5950 -214 511 317 101 25 chr5 157452229 157452832 -45632700 - L2 LINE L2 -111 3161 2511 369 314 8 16 chr5 157453122 157453246 -45632286 - MER5A DNA MER1_type -13 176 54 575 269 12 19 chr5 157453669 157453829 -45631703 - MIR SINE MIR -75 187 29 255 61 0 0 chr5 157454155 157454188 -45631344 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1889 129 36 3 chr5 157455045 157455347 -45630185 - AluSx SINE Alu 0 312 1 599 241 60 6 chr5 157455482 157455648 -45629884 + Charlie8 DNA MER1_type 102 276 -2141 260 356 0 48 chr5 157455679 157455783 -45629749 + MIR SINE MIR 19 117 -91 599 159 15 91 chr5 157455934 157456066 -45629466 + L2 LINE L2 3188 3309 -4 1341 302 87 22 chr5 157456725 157456954 -45628578 + MLT1K LTR MaLR 4 217 -371 1948 124 0 17 chr5 157456954 157457290 -45628242 + AluSx SINE Alu 5 312 0 1341 302 87 22 chr5 157457290 157457603 -45627929 + MLT1K LTR MaLR 217 581 -7 1158 110 11 33 chr5 157457649 157457783 -45627749 + AluJb SINE Alu 1 131 -181 459 0 0 0 chr5 157457783 157457834 -45627698 + (CA)n Simple_repeat Simple_repeat 2 52 0 1158 110 11 33 chr5 157457834 157457881 -45627651 + AluJb SINE Alu 131 178 -134 736 306 35 19 chr5 157458306 157458564 -45626968 - MIR SINE MIR 0 262 1 181 150 0 100 chr5 157458777 157458817 -45626715 - L2 LINE L2 0 3272 3237 2114 129 0 0 chr5 157458902 157459212 -45626320 - AluSx SINE Alu -2 310 1 524 298 36 24 chr5 157459584 157459752 -45625780 - MIR SINE MIR -68 194 25 509 73 12 37 chr5 157461465 157461547 -45623985 - MADE1 DNA Mariner 0 80 1 2525 43 0 0 chr5 157463912 157464215 -45621317 + AluY SINE Alu 1 303 -8 704 126 0 0 chr5 157464410 157464521 -45621011 - AluSg/x SINE Alu -3 306 196 813 135 56 0 chr5 157465577 157465703 -45619829 - FLAM_A SINE Alu 0 133 1 1774 165 0 3 chr5 157465729 157466026 -45619506 - AluJb SINE Alu -14 298 3 1674 146 4 14 chr5 157466127 157466402 -45619130 + AluJo SINE Alu 25 296 -16 2043 120 0 3 chr5 157466403 157466703 -45618829 + AluSx SINE Alu 1 299 -13 2333 89 0 6 chr5 157466782 157467096 -45618436 - AluSx SINE Alu 0 312 1 1179 161 9 24 chr5 157468658 157468869 -45616663 - AluJo SINE Alu -53 259 52 604 219 0 0 chr5 157468952 157469066 -45616466 - FLAM_C SINE Alu -19 114 1 619 212 74 26 chr5 157469107 157469296 -45616236 + MER113 DNA MER1_type? 2 199 -322 314 297 85 34 chr5 157471180 157471298 -45614234 - L1ME3A LINE L1 -1 6169 6046 445 263 119 50 chr5 157471329 157471607 -45613925 - L1MC4a LINE L1 -1905 5903 5607 21 0 0 0 chr5 157473214 157473235 -45612297 + AT_rich Low_complexity Low_complexity 1 21 0 221 254 169 0 chr5 157473271 157473342 -45612190 + L2 LINE L2 3231 3313 0 258 316 90 78 chr5 157473626 157473882 -45611650 + L2 LINE L2 3014 3272 0 2057 109 3 0 chr5 157473978 157474287 -45611245 + AluSx SINE Alu 1 310 0 1687 188 0 10 chr5 157474486 157474800 -45610732 - AluJb SINE Alu -1 311 1 1212 174 41 89 chr5 157475203 157475519 -45610013 - AluJo SINE Alu -11 301 1 307 269 118 25 chr5 157475590 157475642 -45609890 - L1ME4a LINE L1 -1 6120 6074 2217 62 41 0 chr5 157475642 157475934 -45609598 + AluY SINE Alu 1 304 -7 307 269 118 25 chr5 157475934 157476000 -45609532 - L1ME4a LINE L1 -47 6074 5991 1448 213 86 54 chr5 157476027 157476252 -45609280 - L1ME3 LINE L1 -13 6149 5933 2463 155 27 7 chr5 157476252 157476666 -45608866 + MSTB LTR MaLR 1 422 -4 1448 213 86 54 chr5 157476666 157476961 -45608571 - L1ME3 LINE L1 -229 5933 5612 567 263 31 78 chr5 157476970 157477263 -45608269 - L1ME3 LINE L1 -1073 5073 4795 572 264 106 43 chr5 157477387 157477690 -45607842 - HAL1 LINE L1 -1555 952 631 231 289 134 0 chr5 157479419 157479516 -45606016 + L2 LINE L2 3160 3269 -3 240 325 16 73 chr5 157479548 157479739 -45605793 - MLT1K LTR MaLR -75 513 334 331 238 71 119 chr5 157479901 157480111 -45605421 - MLT1L LTR MaLR -414 201 2 2019 83 22 7 chr5 157480403 157480706 -45604826 - AluSc SINE Alu 0 307 1 488 255 66 36 chr5 157481248 157481444 -45604088 - L2 LINE L2 -4 3309 3108 482 200 42 33 chr5 157482284 157482404 -45603128 + MER5C DNA MER1_type 1 121 -203 2298 59 35 0 chr5 157482569 157482859 -45602673 - AluY SINE Alu -11 300 1 2201 89 7 0 chr5 157482891 157483184 -45602348 + AluSx SINE Alu 1 295 -17 805 259 82 17 chr5 157483184 157483408 -45602124 - MIR SINE MIR -20 242 1 671 220 116 97 chr5 157483863 157484131 -45601401 + L1ME3 LINE L1 5868 6140 -22 297 232 146 12 chr5 157485283 157485365 -45600167 - MIR SINE MIR -63 199 107 868 265 82 39 chr5 157485365 157485802 -45599730 - MLT1H LTR MaLR 0 549 94 649 121 30 38 chr5 157485817 157485949 -45599583 - L1MB8 LINE L1 0 6178 6048 7244 55 12 10 chr5 157485949 157486610 -45598922 - L1PA7 LINE L1 -6 6148 5490 2052 121 7 0 chr5 157486610 157486916 -45598616 - AluSg SINE Alu -2 308 1 7244 55 12 10 chr5 157486916 157487612 -45597920 - L1PA7 LINE L1 -664 5490 4793 2044 121 51 44 chr5 157487613 157487688 -45597844 - L1MB7 LINE L1 -120 6058 5985 2348 77 3 0 chr5 157487688 157487988 -45597544 - AluY SINE Alu -10 301 1 2044 121 51 44 chr5 157487988 157488292 -45597240 - L1MB7 LINE L1 -193 5985 5685 264 311 34 0 chr5 157488372 157488491 -45597041 - MLT1H-int LTR MaLR -1 1370 1248 399 230 72 36 chr5 157488887 157489026 -45596506 + HAL1 LINE L1 811 954 -1553 2248 99 7 0 chr5 157489062 157489364 -45596168 - AluSx SINE Alu -8 304 1 284 175 0 53 chr5 157489574 157489631 -45595901 - MLT1G1 LTR MaLR 0 595 537 291 43 0 43 chr5 157490279 157490326 -45595206 + L1PA15 LINE L1 6118 6162 -3 455 229 68 0 chr5 157490348 157490466 -45595066 - L1MD3 LINE L1 -10 7985 7860 692 225 40 23 chr5 157490471 157490644 -45594888 - MLT1G1 LTR MaLR -384 211 36 370 279 82 14 chr5 157490964 157491111 -45594421 - MER117 DNA MER1_type -39 158 2 339 254 149 18 chr5 157491113 157491213 -45594319 - MIR3 SINE MIR -50 158 40 1587 165 0 23 chr5 157491213 157491516 -45594016 + AluJo SINE Alu 2 297 -15 339 254 149 18 chr5 157491516 157491529 -45594003 - MIR3 SINE MIR -168 40 30 180 277 0 121 chr5 157491875 157491958 -45593574 + L2 LINE L2 3197 3269 -3 180 354 177 0 chr5 157492691 157492804 -45592728 + MIR SINE MIR 69 201 -61 602 273 156 28 chr5 157493066 157493537 -45591995 + L2 LINE L2 2726 3246 -67 1544 171 4 21 chr5 157493736 157494058 -45591474 - AluJb SINE Alu 0 327 11 235 316 8 83 chr5 157494824 157494957 -45590575 + L2 LINE L2 2896 3018 -254 5673 83 39 2 chr5 157495063 157495856 -45589676 + L1MA2 LINE L1 5483 6304 0 2419 70 0 0 chr5 157495890 157496189 -45589343 + AluY SINE Alu 1 299 -12 2263 90 3 10 chr5 157496389 157496566 -45588966 - AluSx SINE Alu -2 310 134 2232 96 0 0 chr5 157496566 157496858 -45588674 - AluSg SINE Alu -16 294 3 2263 90 3 10 chr5 157496858 157496992 -45588540 - AluSx SINE Alu -178 134 1 1259 161 19 5 chr5 157497404 157497615 -45587917 - MER20 DNA MER1_type -5 214 1 1708 180 10 3 chr5 157497639 157497944 -45587588 - AluJo SINE Alu -5 307 1 24 32 0 0 chr5 157498222 157498253 -45587279 + AT_rich Low_complexity Low_complexity 1 31 0 959 245 90 13 chr5 157498260 157498493 -45587039 - MIR SINE MIR 0 262 12 245 310 76 53 chr5 157498492 157498663 -45586869 - MIR SINE MIR -7 255 81 * 1949 126 0 0 chr5 157498797 157499075 -45586457 + AluSx SINE Alu 1 278 -34 508 297 115 11 chr5 157499160 157499342 -45586190 - MIR SINE MIR -47 215 15 5760 113 55 145 chr5 157499342 157499620 -45585912 + Tigger3b DNA MER2_type 1 302 -2726 834 156 0 8 chr5 157499620 157499748 -45585784 - AluJb SINE Alu -59 253 127 5760 113 55 145 chr5 157499748 157499817 -45585715 + Tigger3b DNA MER2_type 302 376 -2652 1763 164 3 7 chr5 157499817 157500115 -45585417 + AluJb SINE Alu 1 297 -15 243 0 0 0 chr5 157500116 157500143 -45585389 + (TA)n Simple_repeat Simple_repeat 1 27 0 201 39 0 0 chr5 157500143 157500169 -45585363 + (GA)n Simple_repeat Simple_repeat 1 26 0 5760 113 55 145 chr5 157500169 157501043 -45584489 + Tigger3b DNA MER2_type 374 1231 0 1889 153 0 3 chr5 157502991 157503285 -45582247 + AluJb SINE Alu 1 293 -19 209 200 171 43 chr5 157504957 157505027 -45580505 - L2 LINE L2 0 3272 3194 459 282 157 18 chr5 157505558 157505758 -45579774 - MIR SINE MIR -20 242 16 844 162 0 22 chr5 157508185 157508321 -45577211 + FRAM SINE Alu 28 160 -16 3291 108 39 8 chr5 157508340 157508851 -45576681 - L1MB3 LINE L1 -10 6173 5647 252 199 57 66 chr5 157510505 157510614 -45574918 - MIR3 SINE MIR -33 175 70 704 172 184 6 chr5 157511037 157511200 -45574332 - LTR47A LTR ERVL 0 452 261 2419 68 3 0 chr5 157511262 157511571 -45573961 - AluSp SINE Alu -3 310 1 1754 175 10 10 chr5 157511645 157511953 -45573579 - AluJo SINE Alu -4 308 1 1725 173 3 3 chr5 157512034 157512334 -45573198 + AluJo SINE Alu 3 302 -10 280 304 82 6 chr5 157512930 157513088 -45572444 + MIR3 SINE MIR 32 201 -7 758 255 19 34 chr5 157513242 157513450 -45572082 - MIR SINE MIR -10 252 48 967 101 0 0 chr5 157513479 157513608 -45571924 + AluSq/x SINE Alu 1 129 -184 522 68 61 8 chr5 157513608 157513740 -45571792 + (TA)n Simple_repeat Simple_repeat 1 139 0 1277 110 0 0 chr5 157513740 157513913 -45571619 + AluSp SINE Alu 125 297 -16 312 320 180 13 chr5 157515060 157515432 -45570100 - L1MC4a LINE L1 -1854 5954 5521 270 205 193 12 chr5 157515432 157515515 -45570017 + MIR SINE MIR 134 231 -31 274 253 71 50 chr5 157515655 157515754 -45569778 - L2 LINE L2 -22 3250 3150 382 256 124 11 chr5 157516036 157516277 -45569255 - L1M3 LINE L1 -637 5534 5263 1728 157 21 7 chr5 157516336 157516623 -45568909 - AluSx SINE Alu -21 291 1 1174 91 0 0 chr5 157516803 157517001 -45568531 - AluSp SINE Alu 0 327 130 2074 116 0 10 chr5 157517004 157517306 -45568226 - AluSx SINE Alu -13 299 1 576 184 95 45 chr5 157517399 157517578 -45567954 - LTR45B LTR ERV1 0 489 302 235 200 29 71 chr5 157517635 157517705 -45567827 - MER72 LTR ERV1 -246 476 410 541 233 67 48 chr5 157518048 157518379 -45567153 - L1M3 LINE L1 -1443 4703 4367 1315 310 177 32 chr5 157518606 157519721 -45565811 - L2 LINE L2 -79 3193 1925 2505 244 96 17 chr5 157520472 157521640 -45563892 - L1MC/D LINE L1 -426 5816 4550 2190 87 10 3 chr5 157522102 157522400 -45563132 - AluSq SINE Alu -13 300 1 2403 73 0 0 chr5 157522536 157522837 -45562695 - AluY SINE Alu -10 301 1 365 344 0 16 chr5 157523792 157523917 -45561615 - MIR SINE MIR -59 149 27 342 354 34 7 chr5 157524527 157524674 -45560858 + MIR3 SINE MIR 21 171 -37 214 352 11 11 chr5 157528481 157528572 -45556960 + MIR SINE MIR 160 250 -12 595 312 12 6 chr5 157529035 157529205 -45556327 + MIR SINE MIR 25 195 -67 23 0 0 0 chr5 157530803 157530826 -45554706 + AT_rich Low_complexity Low_complexity 1 23 0 2261 84 3 10 chr5 157531384 157531695 -45553837 - AluSp SINE Alu -4 309 1 1314 199 63 119 chr5 157531899 157532361 -45553171 + MER63B DNA MER1_type 1 436 0 1229 177 75 71 chr5 157534277 157534571 -45550961 - AluJb SINE Alu -6 296 2 1786 127 33 0 chr5 157534789 157535064 -45550468 + AluSq SINE Alu 1 284 -29 2163 88 3 3 chr5 157535205 157535499 -45550033 - AluSg SINE Alu -16 294 1 540 172 0 0 chr5 157535979 157536066 -45549466 - FLAM_A SINE Alu -10 132 46 569 206 144 7 chr5 157536278 157536424 -45549108 + MLT1C LTR MaLR 1 166 -301 2055 184 70 16 chr5 157536682 157537136 -45548396 - MSTB1 LTR MaLR 0 432 1 727 188 20 13 chr5 157537168 157537317 -45548215 - MLT1A1 LTR MaLR -215 150 1 1182 282 126 9 chr5 157537343 157537794 -45547738 + L2 LINE L2 2805 3308 -5 529 181 7 40 chr5 157537994 157538067 -45547465 + L1MA7 LINE L1 6148 6215 -76 2102 146 0 3 chr5 157538067 157538368 -45547164 - AluSx SINE Alu -12 300 1 529 181 7 40 chr5 157538368 157538443 -45547089 + L1MA7 LINE L1 6215 6291 0 201 74 0 0 chr5 157539121 157539148 -45546384 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 217 203 0 94 chr5 157539186 157539250 -45546282 + MIR SINE MIR 108 165 -97 887 220 5 5 chr5 157540951 157541137 -45544395 + MER5A DNA MER1_type 1 186 -3 895 177 50 68 chr5 157541154 157541374 -45544158 - MER58A DNA MER1_type 0 224 9 1965 281 141 13 chr5 157541483 157542408 -45543124 + L2 LINE L2 464 1506 -1808 409 138 15 0 chr5 157542456 157542521 -45543011 + AluS SINE Alu 30 95 -218 1266 135 5 21 chr5 157542597 157542790 -45542742 + AluJb SINE Alu 108 297 -15 304 340 173 6 chr5 157542798 157543116 -45542416 + L2 LINE L2 1541 1911 -1403 1537 264 105 10 chr5 157543317 157544128 -45541404 - L1 LINE L1 -2488 3658 2761 2069 108 4 0 chr5 157544136 157544414 -45541118 - AluSg SINE Alu -31 279 1 955 163 0 0 chr5 157544746 157544913 -45540619 + AluSg/x SINE Alu 137 303 0 693 230 178 116 chr5 157544922 157545450 -45540082 + L2 LINE L2 2191 2685 -628 2317 86 0 10 chr5 157545450 157545752 -45539780 + AluSq SINE Alu 1 299 -14 693 230 178 116 chr5 157545752 157546225 -45539307 + L2 LINE L2 2685 3279 -34 372 330 66 6 chr5 157546512 157546694 -45538838 - L2 LINE L2 -397 2917 2725 180 0 0 0 chr5 157546953 157546973 -45538559 + (A)n Simple_repeat Simple_repeat 1 20 0 1087 284 145 48 chr5 157547014 157547655 -45537877 - L2 LINE L2 -674 2640 1938 331 269 64 92 chr5 157549049 157549087 -45536445 - MIR SINE MIR -119 143 105 2792 111 23 57 chr5 157549087 157549253 -45536279 - MSTB LTR MaLR -1 425 255 2677 55 0 0 chr5 157549253 157549564 -45535968 + AluY SINE Alu 1 311 0 2792 111 23 57 chr5 157549564 157549837 -45535695 - MSTB LTR MaLR -171 255 1 331 269 64 92 chr5 157549837 157549939 -45535593 - MIR SINE MIR -157 105 7 1692 177 7 26 chr5 157550070 157550375 -45535157 + AluJo SINE Alu 1 299 -13 792 258 63 48 chr5 157550864 157551116 -45534416 + L2 LINE L2 2123 2378 -936 252 345 7 49 chr5 157551475 157551617 -45533915 + L2 LINE L2 2922 3057 -215 528 199 205 0 chr5 157551684 157551840 -45533692 + L2 LINE L2 2439 2626 -688 1978 124 24 0 chr5 157553887 157554178 -45531354 + AluSx SINE Alu 5 302 -10 1862 163 0 3 chr5 157554520 157554826 -45530706 - AluJo SINE Alu -7 305 1 2371 77 3 3 chr5 157554833 157555132 -45530400 - AluSp SINE Alu -14 299 1 345 185 46 0 chr5 157555289 157555354 -45530178 - MIR3 SINE MIR -27 181 114 2424 71 0 3 chr5 157556157 157556451 -45529081 + AluY SINE Alu 1 293 -18 618 254 39 20 chr5 157557224 157557423 -45528109 + L1ME3A LINE L1 5751 5956 -214 356 162 38 0 chr5 157557423 157557528 -45528004 + (TA)n Simple_repeat Simple_repeat 2 110 0 2230 111 0 0 chr5 157557535 157557833 -45527699 - AluSx SINE Alu -14 298 1 2446 75 0 0 chr5 157557877 157558171 -45527361 - AluSg1 SINE Alu -15 294 1 1767 92 0 4 chr5 157558556 157558783 -45526749 + AluSg/x SINE Alu 82 307 -5 1919 128 62 0 chr5 157560241 157560530 -45525002 + AluSq SINE Alu 1 307 -6 2366 74 3 7 chr5 157560641 157560938 -45524594 + AluY SINE Alu 2 297 -14 420 20 0 0 chr5 157561529 157561578 -45523954 + (ATG)n Simple_repeat Simple_repeat 2 50 0 291 342 62 36 chr5 157561793 157561986 -45523546 - L2 LINE L2 -160 3112 2915 2125 108 23 23 chr5 157562012 157562319 -45523213 + AluSx SINE Alu 1 307 -5 280 360 40 48 chr5 157562335 157562447 -45523085 - L2 LINE L2 -430 2884 2773 2127 107 0 32 chr5 157562447 157562755 -45522777 + AluSq SINE Alu 1 298 -15 280 360 40 48 chr5 157562755 157562914 -45522618 - L2 LINE L2 -541 2773 2615 308 263 79 44 chr5 157562970 157563084 -45522448 + L1MEc LINE L1 1266 1383 -5013 963 182 11 11 chr5 157563089 157563270 -45522262 + AluJb SINE Alu 129 309 -3 302 261 97 18 chr5 157563273 157563438 -45522094 + L1MEc LINE L1 1399 1576 -4820 2049 116 23 20 chr5 157563440 157563743 -45521789 + AluSx SINE Alu 1 304 -8 2189 103 26 0 chr5 157563799 157564101 -45521431 + AluSg SINE Alu 1 310 0 306 244 69 15 chr5 157564193 157564324 -45521208 + L1MEc LINE L1 2560 2697 -3518 609 169 102 17 chr5 157565018 157565136 -45520396 - FLAM_A SINE Alu -2 131 4 2249 92 23 0 chr5 157565233 157565569 -45519963 + AluSp SINE Alu 1 343 0 34 24 0 0 chr5 157566349 157566390 -45519142 + AT_rich Low_complexity Low_complexity 1 41 0 796 172 0 16 chr5 157567270 157567398 -45518134 + FLAM_A SINE Alu 1 126 -7 1868 161 3 29 chr5 157567418 157567734 -45517798 + AluJb SINE Alu 5 312 0 2511 55 0 3 chr5 157568753 157569046 -45516486 - AluY SINE Alu -19 292 1 981 44 0 0 chr5 157570766 157570880 -45514652 + AluY SINE Alu 187 300 -11 26 30 0 0 chr5 157570984 157571017 -45514515 + AT_rich Low_complexity Low_complexity 1 33 0 761 231 0 0 chr5 157571371 157571501 -45514031 + FLAM_A SINE Alu 1 130 -3 28 0 0 0 chr5 157571544 157571572 -45513960 + AT_rich Low_complexity Low_complexity 1 28 0 2301 109 3 6 chr5 157571642 157571955 -45513577 + AluSx SINE Alu 1 312 0 180 0 0 0 chr5 157572111 157572131 -45513401 + (G)n Simple_repeat Simple_repeat 1 20 0 741 206 7 0 chr5 157572145 157572286 -45513246 + AluSp SINE Alu 153 294 -19 229 296 141 0 chr5 157572301 157572443 -45513089 - L2 LINE L2 -653 2661 2500 1771 145 11 14 chr5 157573042 157573325 -45512207 - AluSx SINE Alu -30 282 1 1999 225 21 35 chr5 157573525 157574041 -45511491 + L1MC3 LINE L1 6345 6853 -932 1209 153 47 24 chr5 157574058 157575115 -45510417 + L1MC2 LINE L1 5193 6326 -18 2001 122 3 3 chr5 157575119 157575407 -45510125 + AluSx SINE Alu 1 288 -24 1528 186 4 8 chr5 157575421 157575684 -45509848 + AluJb SINE Alu 2 263 -49 485 151 21 0 chr5 157575689 157575782 -45509750 + L1MD3 LINE L1 6904 6998 -997 433 309 162 21 chr5 157576491 157576818 -45508714 + MLT1L LTR MaLR 3 375 -240 226 184 0 0 chr5 157576925 157576963 -45508569 + L1ME LINE L1 5842 5879 -287 324 358 90 57 chr5 157578855 157579252 -45506280 - L2 LINE L2 0 3272 2839 370 276 121 23 chr5 157579252 157579426 -45506106 - MER117 DNA MER1_type -3 194 4 324 358 90 57 chr5 157579426 157579691 -45505841 - L2 LINE L2 -433 2839 2584 2151 127 13 0 chr5 157581315 157581615 -45503917 - AluSq SINE Alu -9 304 1 2216 93 21 0 chr5 157581887 157582176 -45503356 + AluSc SINE Alu 1 295 -14 2069 117 3 3 chr5 157582298 157582588 -45502944 + AluSg SINE Alu 2 291 -19 1772 155 39 0 chr5 157582609 157582893 -45502639 - AluSx SINE Alu -17 295 1 308 294 17 72 chr5 157583593 157583786 -45501746 - MIR SINE MIR -52 156 15 293 312 89 40 chr5 157586136 157586319 -45499213 - MER5A DNA MER1_type 0 178 1 201 74 0 0 chr5 157586458 157586485 -45499047 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 373 246 32 189 chr5 157586505 157586626 -45498906 + MIR SINE MIR 20 158 -104 1888 125 3 55 chr5 157586626 157586954 -45498578 - AluJb SINE Alu -1 311 1 2259 90 10 0 chr5 157586957 157587257 -45498275 - AluSx SINE Alu -8 304 2 373 246 32 189 chr5 157587257 157587411 -45498121 + MIR SINE MIR 160 255 -7 196 309 0 62 chr5 157587572 157587653 -45497879 + L2 LINE L2 3151 3226 -46 926 160 0 26 chr5 157587822 157588009 -45497523 + AluJb SINE Alu 133 315 0 286 337 0 0 chr5 157588111 157588194 -45497338 + MIR SINE MIR 17 99 -163 2150 137 7 0 chr5 157588270 157588577 -45496955 - AluSx SINE Alu -3 309 1 1554 154 71 117 chr5 157588660 157588752 -45496780 + MLT1C LTR MaLR 3 98 -369 1736 195 3 3 chr5 157588752 157589050 -45496482 + AluJo SINE Alu 1 298 -14 1554 154 71 117 chr5 157589050 157589254 -45496278 + MLT1C LTR MaLR 98 271 -196 2374 83 3 0 chr5 157589254 157589543 -45495989 + AluSp SINE Alu 1 290 -23 1554 154 71 117 chr5 157589543 157589724 -45495808 + MLT1C LTR MaLR 271 459 -8 1839 142 17 14 chr5 157589754 157590043 -45495489 + AluJo SINE Alu 1 290 -22 2593 60 0 0 chr5 157590045 157590347 -45495185 - AluY SINE Alu -9 302 1 26 30 0 0 chr5 157590347 157590380 -45495152 + AT_rich Low_complexity Low_complexity 1 33 0 304 301 109 5 chr5 157590397 157590590 -45494942 - HAL1 LINE L1 -883 1624 1412 180 97 0 0 chr5 157590604 157590635 -45494897 + (TG)n Simple_repeat Simple_repeat 2 32 0 758 131 7 85 chr5 157590730 157590883 -45494649 - FLAM_C SINE Alu 0 143 3 237 320 78 7 chr5 157591006 157591159 -45494373 - L1MEd LINE L1 -5025 1094 931 299 155 0 84 chr5 157591165 157591236 -45494296 - AluJ/FRAM SINE Alu -14 288 224 1021 174 36 55 chr5 157591236 157591279 -45494253 + AluJo SINE Alu 97 139 -173 2419 97 0 0 chr5 157591279 157591579 -45493953 + AluSg SINE Alu 1 300 -10 1021 174 36 55 chr5 157591579 157591754 -45493778 + AluJo SINE Alu 139 311 -1 1489 276 87 39 chr5 157591995 157592807 -45492725 - L2 LINE L2 -4 3309 2452 957 206 0 0 chr5 157592923 157593114 -45492418 + AluJb SINE Alu 123 313 0 463 254 92 3 chr5 157593148 157593328 -45492204 + L1MA10 LINE L1 5976 6327 -4 244 278 14 14 chr5 157593330 157593402 -45492130 - L2 LINE L2 -847 2467 2396 599 297 68 29 chr5 157593486 157593942 -45491590 - MLT1J LTR MaLR 0 511 1 767 262 126 0 chr5 157594042 157594248 -45491284 + MIR SINE MIR 3 234 -28 773 306 7 26 chr5 157595468 157595739 -45489793 - MLT1K LTR MaLR -240 348 83 1269 176 0 18 chr5 157596137 157596359 -45489173 - AluJb SINE Alu -10 302 85 1694 115 158 0 chr5 157596483 157596743 -45488789 - AluSx SINE Alu -1 301 1 1104 31 0 0 chr5 157596979 157597106 -45488426 + AluY SINE Alu 176 302 -9 2438 69 3 10 chr5 157597117 157597423 -45488109 + AluSc SINE Alu 1 304 -5 428 330 50 11 chr5 157597434 157597616 -45487916 - MIR3 SINE MIR -9 199 11 2426 98 3 0 chr5 157597777 157598082 -45487450 + AluSp SINE Alu 1 306 -7 1628 146 7 40 chr5 157598368 157598642 -45486890 + AluJb SINE Alu 43 307 -5 398 283 14 29 chr5 157598672 157598810 -45486722 - MER5A DNA MER1_type -7 182 47 35 71 0 0 chr5 157598833 157598903 -45486629 + AT_rich Low_complexity Low_complexity 1 70 0 249 324 162 0 chr5 157599263 157599374 -45486158 - L2 LINE L2 0 3313 3185 309 346 54 22 chr5 157599435 157599620 -45485912 + L2 LINE L2 2870 3060 -212 1824 182 3 3 chr5 157599636 157599943 -45485589 + AluJb SINE Alu 1 307 -5 269 302 217 23 chr5 157600231 157600360 -45485172 + L2 LINE L2 3118 3271 -1 195 204 184 0 chr5 157600544 157600593 -45484939 + L2 LINE L2 3122 3179 -93 289 210 48 0 chr5 157600850 157600912 -45484620 + MIR SINE MIR 128 192 -70 2195 127 0 0 chr5 157601038 157601364 -45484168 - AluSx SINE Alu 0 312 1 258 266 119 21 chr5 157601540 157601683 -45483849 + L2 LINE L2 2804 2960 -312 759 186 0 8 chr5 157601730 157601854 -45483678 + FLAM_C SINE Alu 5 127 -16 676 237 13 32 chr5 157602013 157602169 -45483363 - L2 LINE L2 0 3313 3161 239 328 104 0 chr5 157602182 157602249 -45483283 + L2 LINE L2 3230 3303 -10 856 265 134 41 chr5 157602558 157602786 -45482746 + MLT1J2 LTR MaLR 2 208 -242 2182 140 0 0 chr5 157602786 157603086 -45482446 + AluSx SINE Alu 2 301 -11 856 265 134 41 chr5 157603086 157603253 -45482279 + MLT1J2 LTR MaLR 208 358 -92 1655 154 59 46 chr5 157603253 157603296 -45482236 - AluJb SINE Alu -2 310 269 2092 130 0 3 chr5 157603296 157603580 -45481952 + AluSx SINE Alu 1 283 -29 219 36 0 0 chr5 157603580 157603608 -45481924 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1655 154 59 46 chr5 157603608 157603869 -45481663 - AluJb SINE Alu -42 270 1 856 265 134 41 chr5 157603869 157603883 -45481649 + MLT1J2 LTR MaLR 358 450 0 725 287 144 51 chr5 157603914 157604817 -45480715 + L2 LINE L2 2246 3218 -54 2198 98 0 14 chr5 157604973 157605270 -45480262 - AluSg SINE Alu -14 296 4 184 286 36 0 chr5 157605275 157605331 -45480201 - MIR SINE MIR -61 147 90 471 277 189 34 chr5 157606443 157606649 -45478883 - MIR SINE MIR -19 243 6 222 150 0 0 chr5 157606649 157606689 -45478843 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 226 244 252 16 chr5 157606700 157606823 -45478709 - L2 LINE L2 0 3272 3121 222 150 0 0 chr5 157607571 157607611 -45477921 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 337 218 13 0 chr5 157608068 157608146 -45477386 + MIR SINE MIR 85 163 -99 1332 169 132 44 chr5 157608203 157608476 -45477056 - AluJo SINE Alu -15 297 1 1264 246 103 62 chr5 157608562 157608847 -45476685 + L2 LINE L2 2356 2628 -685 797 156 0 37 chr5 157608847 157608982 -45476550 - FLAM_C SINE Alu -2 131 2 1264 246 103 62 chr5 157608982 157609214 -45476318 + L2 LINE L2 2628 2970 -343 2385 91 3 3 chr5 157609214 157609521 -45476011 - AluSp SINE Alu -5 308 2 1264 246 103 62 chr5 157609521 157609625 -45475907 + L2 LINE L2 2970 3068 -245 1793 140 46 21 chr5 157609785 157610093 -45475439 + AluJo SINE Alu 1 312 0 267 223 85 96 chr5 157610541 157610635 -45474897 + MIR3 SINE MIR 14 106 -102 514 312 60 39 chr5 157610638 157610707 -45474825 - MIR SINE MIR -4 258 192 1855 164 3 3 chr5 157610707 157611000 -45474532 - AluJb SINE Alu -17 295 3 514 312 60 39 chr5 157611000 157611164 -45474368 - MIR SINE MIR -70 192 20 2101 134 0 0 chr5 157611244 157611527 -45474005 - AluSx SINE Alu -20 292 10 1984 158 0 34 chr5 157611576 157611899 -45473633 - AluJo SINE Alu 0 312 1 438 304 135 46 chr5 157611989 157612226 -45473306 + MIR SINE MIR 3 260 -2 2124 126 3 35 chr5 157612740 157612917 -45472615 - AluJb SINE Alu -4 308 144 2479 93 0 3 chr5 157612917 157613227 -45472305 - AluSx SINE Alu -3 309 1 2124 126 3 35 chr5 157613227 157613367 -45472165 - AluJb SINE Alu -168 144 1 1394 215 125 45 chr5 157613381 157613758 -45471774 - L1ME3A LINE L1 -64 6106 5680 2214 120 0 3 chr5 157613758 157614058 -45471474 - AluSg SINE Alu -11 299 1 1394 215 125 45 chr5 157614058 157614169 -45471363 - L1ME3A LINE L1 -490 5680 5579 839 267 144 15 chr5 157614494 157615003 -45470529 - L2 LINE L2 0 3313 2434 784 259 101 9 chr5 157615134 157615362 -45470170 + MIR SINE MIR 1 249 -13 24 77 0 0 chr5 157616218 157616270 -45469262 + AT_rich Low_complexity Low_complexity 1 52 0 195 162 0 0 chr5 157616475 157616512 -45469020 + CT-rich Low_complexity Low_complexity 1 37 0 242 91 36 73 chr5 157616915 157616970 -45468562 - Alu SINE Alu -1 301 249 244 273 93 62 chr5 157617502 157617663 -45467869 - MIR SINE MIR -52 210 45 2633 64 0 3 chr5 157617666 157617978 -45467554 + AluY SINE Alu 1 311 0 2356 102 3 6 chr5 157619382 157619695 -45465837 - AluSx SINE Alu 0 312 1 285 323 50 10 chr5 157619840 157619939 -45465593 - MIR3 SINE MIR -92 116 14 408 296 90 41 chr5 157620447 157620661 -45464871 - MIR SINE MIR -24 238 16 804 228 73 30 chr5 157620786 157621018 -45464514 - MIR SINE MIR 0 262 21 570 263 24 37 chr5 157621453 157621657 -45463875 + MIR SINE MIR 17 212 -50 2242 119 0 3 chr5 157621945 157622257 -45463275 - AluSq SINE Alu -1 312 2 2075 133 3 0 chr5 157622577 157622862 -45462670 + AluSx SINE Alu 9 294 -18 2240 133 0 9 chr5 157622862 157623177 -45462355 + AluSx SINE Alu 1 312 0 413 300 44 64 chr5 157623370 157623620 -45461912 + MIR SINE MIR 2 246 -16 2358 113 0 3 chr5 157626419 157626730 -45458802 + AluSx SINE Alu 1 310 -2 228 302 156 21 chr5 157626738 157626834 -45458698 - MIR3 SINE MIR -97 111 3 527 252 180 29 chr5 157626898 157627104 -45458428 + MIR SINE MIR 26 262 0 26 30 0 0 chr5 157629086 157629119 -45456413 + GC_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 157629220 157629243 -45456289 + GC_rich Low_complexity Low_complexity 1 23 0 24 77 0 0 chr5 157629267 157629319 -45456213 + GC_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr5 157629602 157629637 -45455895 + AT_rich Low_complexity Low_complexity 1 35 0 783 222 25 78 chr5 157630297 157630540 -45454992 + MIR SINE MIR 33 262 0 780 309 52 41 chr5 157631264 157631633 -45453899 - L2 LINE L2 -57 3256 2884 248 257 76 48 chr5 157631919 157632024 -45453508 - MIR SINE MIR -75 133 26 419 272 102 22 chr5 157632172 157632373 -45453159 - MIR SINE MIR -43 219 7 701 276 38 57 chr5 157632511 157632775 -45452757 + MIR SINE MIR 3 261 -1 2242 116 0 3 chr5 157633784 157634087 -45451445 + AluSx SINE Alu 1 302 -10 396 284 37 0 chr5 157634149 157634258 -45451274 + MIR SINE MIR 109 221 -41 346 245 104 17 chr5 157634449 157634673 -45450859 + MER20B DNA MER1_type 1 297 -486 902 223 81 12 chr5 157634714 157634904 -45450628 + MER20B DNA MER1_type 437 659 -124 2009 150 3 10 chr5 157634904 157635204 -45450328 - AluJo SINE Alu -14 298 1 902 223 81 12 chr5 157635204 157635336 -45450196 + MER20B DNA MER1_type 659 781 -2 1885 156 23 23 chr5 157635372 157635674 -45449858 + AluJb SINE Alu 1 302 -10 1899 158 7 10 chr5 157635925 157636217 -45449315 - AluJb SINE Alu -21 291 1 1709 186 10 29 chr5 157636268 157636579 -45448953 - AluJo SINE Alu -7 305 1 499 265 104 43 chr5 157637075 157637286 -45448246 + MIR SINE MIR 23 246 -16 363 270 66 7 chr5 157637385 157637522 -45448010 + MIR SINE MIR 54 198 -64 938 212 0 0 chr5 157637677 157637842 -45447690 + FRAM SINE Alu 2 166 0 431 282 55 43 chr5 157637853 157637903 -45447629 - MIR SINE MIR -6 256 208 2045 121 47 0 chr5 157637903 157638201 -45447331 - AluSq SINE Alu -1 312 1 431 282 55 43 chr5 157638201 157638313 -45447219 - MIR SINE MIR -54 208 92 704 198 93 73 chr5 157638327 157638575 -45446957 + L1MD2 LINE L1 6101 6353 -6 25 0 0 0 chr5 157638577 157638602 -45446930 + AT_rich Low_complexity Low_complexity 1 25 0 1885 137 0 11 chr5 157638622 157638926 -45446606 - AluJb SINE Alu 0 301 1 1849 143 55 3 chr5 157638976 157639269 -45446263 + AluJo SINE Alu 1 308 -4 491 348 7 7 chr5 157639395 157639550 -45445982 - MIR3 SINE MIR -34 174 20 1338 253 69 65 chr5 157640440 157640682 -45444850 - L2 LINE L2 -6 3307 3067 2403 52 3 58 chr5 157640682 157641009 -45444523 + AluY SINE Alu 1 309 -2 1338 253 69 65 chr5 157641009 157641585 -45443947 - L2 LINE L2 -246 3067 2499 2271 102 0 7 chr5 157641741 157642050 -45443482 + AluSx SINE Alu 1 307 0 1097 165 6 0 chr5 157642053 157642223 -45443309 + AluJo/FRAM SINE Alu 134 304 -8 632 275 60 30 chr5 157644135 157644368 -45441164 - MIR SINE MIR -22 240 1 317 303 0 22 chr5 157645113 157645202 -45440330 + (CGTG)n Simple_repeat Simple_repeat 1 87 0 300 345 26 0 chr5 157645229 157645345 -45440187 + L2 LINE L2 3195 3313 0 207 340 31 10 chr5 157645743 157645840 -45439692 + MIR SINE MIR 30 128 -80 313 278 14 0 chr5 157647820 157647892 -45437640 - L2 LINE L2 0 3272 3200 388 283 22 0 chr5 157648916 157649008 -45436524 + MIR SINE MIR 107 200 -62 1011 224 35 39 chr5 157649047 157649306 -45436226 + MIR SINE MIR 5 262 0 467 303 86 0 chr5 157651284 157651436 -45434096 - MIR SINE MIR -3 259 95 1404 164 160 4 chr5 157651610 157651878 -45433654 + AluJo SINE Alu 3 312 0 196 310 69 0 chr5 157651917 157651975 -45433557 - L2 LINE L2 -6 3266 3205 181 188 0 0 chr5 157652218 157652250 -45433282 + MIR SINE MIR 61 92 -170 2191 133 0 13 chr5 157652287 157652602 -45432930 + AluJb SINE Alu 1 311 -1 717 282 83 75 chr5 157652635 157652749 -45432783 - L2 LINE L2 -35 3278 3166 2273 115 3 3 chr5 157652749 157653062 -45432470 + AluSq SINE Alu 1 313 0 717 282 83 75 chr5 157653062 157653415 -45432117 - L2 LINE L2 -147 3166 2807 414 274 0 10 chr5 157653413 157653515 -45432017 + MIR SINE MIR 92 192 -70 * 218 213 0 0 chr5 157653752 157653799 -45431733 + A-rich Low_complexity Low_complexity 1 47 0 527 241 181 42 chr5 157654541 157654757 -45430775 + MIR SINE MIR 17 262 0 960 182 6 0 chr5 157655548 157655707 -45429825 + FAM SINE Alu 6 165 -20 2072 103 47 30 chr5 157655822 157656122 -45429410 + AluSx SINE Alu 1 305 -7 2456 70 34 0 chr5 157656188 157656486 -45429046 + AluSq SINE Alu 1 308 -5 1334 144 69 119 chr5 157657082 157657176 -45428356 + AluJb SINE Alu 1 98 -214 324 0 0 0 chr5 157657176 157657212 -45428320 + (CA)n Simple_repeat Simple_repeat 1 36 0 1334 144 69 119 chr5 157657212 157657437 -45428095 + AluJb SINE Alu 98 304 -8 2434 107 0 0 chr5 157657437 157657746 -45427786 + AluSg SINE Alu 1 310 0 2238 133 3 0 chr5 157657774 157658083 -45427449 + AluSx SINE Alu 1 310 -2 424 202 43 0 chr5 157658083 157658177 -45427355 - L1ME3A LINE L1 -321 5849 5752 1707 259 108 26 chr5 157658182 157658855 -45426677 - L1MEc LINE L1 -2596 3944 3328 2232 93 0 0 chr5 157658855 157659133 -45426399 + AluY SINE Alu 1 278 -33 423 0 0 0 chr5 157659133 157659180 -45426352 + (CA)n Simple_repeat Simple_repeat 1 47 0 1707 259 108 26 chr5 157659180 157659280 -45426252 - L1MEc LINE L1 -3212 3328 3238 2603 67 0 0 chr5 157659280 157659592 -45425940 - AluSx SINE Alu 0 312 1 1707 259 108 26 chr5 157659592 157660071 -45425461 - L1MEc LINE L1 -3302 3238 2587 1696 152 0 63 chr5 157660092 157660245 -45425287 - AluJb SINE Alu -23 289 128 257 0 30 0 chr5 157660245 157660278 -45425254 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2001 141 0 3 chr5 157660278 157660561 -45424971 - AluSx SINE Alu -30 282 1 1696 152 0 63 chr5 157660561 157660708 -45424824 - AluJb SINE Alu -182 130 7 1217 138 5 21 chr5 157660718 157660735 -45424797 - AluSp SINE Alu -8 305 289 243 0 0 0 chr5 157660735 157660762 -45424770 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 1217 138 5 21 chr5 157660762 157660916 -45424616 - AluSp SINE Alu -24 289 135 1951 170 3 3 chr5 157660916 157661222 -45424310 - AluJo SINE Alu -6 306 1 1217 138 5 21 chr5 157661222 157661238 -45424294 - AluSp SINE Alu -178 135 120 493 276 102 15 chr5 157661238 157661438 -45424094 - L1MEc LINE L1 -3942 2635 2420 440 195 24 0 chr5 157661438 157661520 -45424012 - L2 LINE L2 -823 2491 2408 2463 75 0 3 chr5 157661549 157661854 -45423678 - AluY SINE Alu -7 304 1 188 0 74 0 chr5 157661855 157661882 -45423650 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 860 111 8 8 chr5 157661884 157662001 -45423531 - AluSq/x SINE Alu -195 117 1 854 264 130 16 chr5 157662005 157662312 -45423220 - L2 LINE L2 -983 2331 1990 1559 138 6 114 chr5 157662513 157662838 -45422694 + AluJo SINE Alu 1 290 -22 2051 110 0 11 chr5 157662873 157663154 -45422378 - AluSq SINE Alu -35 278 1 910 112 16 0 chr5 157663159 157663284 -45422248 - FLAM_C SINE Alu -6 127 1 1581 143 0 131 chr5 157663353 157663696 -45421836 - AluJo SINE Alu 0 302 5 531 260 313 0 chr5 157663788 157664034 -45421498 - L2 LINE L2 0 3313 2991 1014 189 0 12 chr5 157664112 157664281 -45421251 + AluJo SINE Alu 1 167 -145 268 268 122 0 chr5 157664568 157664650 -45420882 - MER5A DNA MER1_type 0 189 98 244 256 200 0 chr5 157665078 157665168 -45420364 - L2 LINE L2 0 3313 3206 937 212 0 26 chr5 157665202 157665395 -45420137 + AluJo SINE Alu 115 302 -10 431 297 85 5 chr5 157665409 157665608 -45419924 - L2 LINE L2 -264 3008 2785 2748 159 18 48 chr5 157665676 157665919 -45419613 + L1MB8 LINE L1 4668 4917 -1229 2330 116 3 3 chr5 157665919 157666230 -45419302 - AluSx SINE Alu -1 311 1 2748 159 18 48 chr5 157666230 157666591 -45418941 + L1MB8 LINE L1 4917 5254 -892 2231 164 46 42 chr5 157666589 157667012 -45418520 + L1MB8 LINE L1 5648 6075 -103 * 892 145 113 38 chr5 157667012 157667171 -45418361 + FAM SINE Alu 5 175 0 2231 164 46 42 chr5 157667171 157667272 -45418260 + L1MB8 LINE L1 6075 6174 -4 994 206 0 0 chr5 157667276 157667446 -45418086 + FRAM SINE Alu 4 173 -3 1945 151 7 0 chr5 157667775 157668060 -45417472 - AluSx SINE Alu -25 287 1 2285 125 0 3 chr5 157668070 157668382 -45417150 - AluSq SINE Alu -2 311 1 1324 164 170 0 chr5 157668382 157668706 -45416826 - Charlie1a DNA MER1_type -209 1246 868 1729 152 61 7 chr5 157668715 157668992 -45416540 - AluJb SINE Alu -20 292 1 854 75 0 0 chr5 157669005 157669111 -45416421 - FLAM_C SINE Alu -17 126 21 2364 104 0 0 chr5 157669122 157669421 -45416111 - AluSx SINE Alu -13 299 1 3013 186 59 12 chr5 157669424 157670102 -45415430 - Charlie1a DNA MER1_type -580 875 166 1126 149 0 0 chr5 157670106 157670267 -45415265 - FRAM SINE Alu -15 161 1 676 204 61 7 chr5 157670291 157670438 -45415094 - Charlie1a DNA MER1_type -1297 158 4 2105 114 4 0 chr5 157670447 157670747 -45414785 + AluSx SINE Alu 1 301 0 1085 144 0 0 chr5 157670747 157670893 -45414639 + AluSg/x SINE Alu 136 281 -31 2036 126 39 0 chr5 157670916 157671034 -45414498 + AluSx SINE Alu 3 115 -197 459 0 0 0 chr5 157671034 157671085 -45414447 + (CA)n Simple_repeat Simple_repeat 2 52 0 2036 126 39 0 chr5 157671085 157671251 -45414281 + AluSx SINE Alu 115 298 -14 2242 112 3 3 chr5 157671663 157671966 -45413566 - AluSc SINE Alu -6 303 1 233 291 51 0 chr5 157671966 157672045 -45413487 - L1MC/D LINE L1 -1982 5826 5744 1793 151 10 27 chr5 157672052 157672213 -45413319 - AluSx SINE Alu -18 294 139 2196 112 10 3 chr5 157672213 157672509 -45413023 - AluSx SINE Alu -14 298 1 1793 151 10 27 chr5 157672509 157672646 -45412886 - AluSx SINE Alu -173 139 1 222 37 0 0 chr5 157672781 157672808 -45412724 + (A)n Simple_repeat Simple_repeat 1 27 0 2125 125 17 0 chr5 157672809 157673098 -45412434 + AluSx SINE Alu 1 294 -18 2420 85 3 0 chr5 157674120 157674415 -45411117 + AluSq SINE Alu 1 296 -17 2156 128 0 0 chr5 157674938 157675227 -45410305 - AluSg SINE Alu -15 295 7 863 144 0 8 chr5 157675463 157675588 -45409944 + FLAM_C SINE Alu 1 124 -19 204 266 75 43 chr5 157675704 157675798 -45409734 - MIR SINE MIR -41 221 125 2002 175 0 0 chr5 157676280 157676583 -45408949 + AluJb SINE Alu 1 303 -9 26 82 0 0 chr5 157676690 157676751 -45408781 + AT_rich Low_complexity Low_complexity 1 61 0 30 45 0 0 chr5 157678685 157678729 -45406803 + GC_rich Low_complexity Low_complexity 1 44 0 270 0 0 0 chr5 157680214 157680244 -45405288 + (TA)n Simple_repeat Simple_repeat 2 31 0 460 162 47 68 chr5 157680595 157680743 -45404789 + L1MA6 LINE L1 5890 6034 -266 2208 109 7 3 chr5 157681193 157681487 -45404045 + AluSx SINE Alu 1 295 -17 2042 115 3 70 chr5 157681662 157681877 -45403655 - AluSx SINE Alu -3 309 122 459 0 0 0 chr5 157681877 157681928 -45403604 + (TAG)n Simple_repeat Simple_repeat 1 51 0 2042 115 3 70 chr5 157681928 157682043 -45403489 - AluSx SINE Alu -190 122 1 812 184 45 0 chr5 157682043 157682211 -45403321 - L1MC/D LINE L1 -2172 5613 5435 1948 147 0 23 chr5 157682332 157682638 -45402894 - AluJo SINE Alu -11 301 3 771 147 7 70 chr5 157682895 157683038 -45402494 - AluJo SINE Alu -177 135 2 1148 53 0 0 chr5 157683163 157683295 -45402237 - AluY SINE Alu -179 132 1 1440 85 0 0 chr5 157683381 157683558 -45401974 - AluSg/x SINE Alu -10 300 124 576 289 67 11 chr5 157683797 157683977 -45401555 + MIR SINE MIR 2 191 -71 1671 176 6 22 chr5 157684195 157684508 -45401024 + AluJb SINE Alu 1 308 -4 2569 65 0 7 chr5 157684524 157684834 -45400698 - AluY SINE Alu -3 308 1 611 132 149 0 chr5 157684941 157685062 -45400470 - U4 snRNA snRNA -6 139 1 2345 100 0 0 chr5 157685070 157685361 -45400171 - AluSg SINE Alu -19 291 1 1096 104 0 0 chr5 157685362 157685497 -45400035 - AluSq/x SINE Alu -178 135 1 2414 105 0 3 chr5 157685613 157685926 -45399606 - AluSq SINE Alu -1 312 1 24 67 0 0 chr5 157686726 157686771 -45398761 + AT_rich Low_complexity Low_complexity 1 45 0 2459 71 0 0 chr5 157686862 157687158 -45398374 - AluSc SINE Alu -13 296 1 2025 139 0 16 chr5 157687283 157687459 -45398073 - AluJb SINE Alu -4 308 138 2322 100 0 3 chr5 157687459 157687758 -45397774 - AluSx SINE Alu -14 298 1 2025 139 0 16 chr5 157687758 157687891 -45397641 - AluJb SINE Alu -174 138 4 631 308 59 13 chr5 157688101 157688338 -45397194 - MIR SINE MIR -1 261 14 213 121 0 0 chr5 157689752 157689785 -45395747 + (CGG)n Simple_repeat Simple_repeat 1 33 0 2520 59 16 0 chr5 157690579 157690886 -45394646 - AluSq SINE Alu -1 312 1 1856 63 13 8 chr5 157691031 157691269 -45394263 - AluSc SINE Alu -13 296 58 2031 114 33 7 chr5 157692043 157692342 -45393190 - AluSq SINE Alu -6 307 1 851 177 8 0 chr5 157692346 157692476 -45393056 - FLAM_A SINE Alu -2 131 1 471 63 0 0 chr5 157692575 157692638 -45392894 + (TG)n Simple_repeat Simple_repeat 2 64 0 2082 153 0 0 chr5 157693242 157693550 -45391982 - AluSx SINE Alu -4 308 1 2122 104 10 3 chr5 157693577 157693874 -45391658 + AluSx SINE Alu 3 301 -11 1788 110 95 4 chr5 157694179 157694452 -45391080 - AluSx SINE Alu -14 298 1 2237 101 3 3 chr5 157694632 157694929 -45390603 + AluSg SINE Alu 1 297 -13 31 0 0 0 chr5 157694945 157694976 -45390556 + AT_rich Low_complexity Low_complexity 1 31 0 230 152 0 0 chr5 157694981 157695014 -45390518 - Alu SINE Alu -268 33 1 1371 202 65 17 chr5 157695016 157695308 -45390224 - AluJo SINE Alu -6 306 1 21 0 0 0 chr5 157695316 157695337 -45390195 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr5 157695440 157695482 -45390050 + (TG)n Simple_repeat Simple_repeat 1 42 0 2237 112 0 7 chr5 157695512 157695816 -45389716 + AluSx SINE Alu 1 302 -10 697 158 0 173 chr5 157696310 157696512 -45389020 - FRAM SINE Alu -11 165 1 1091 156 120 0 chr5 157696534 157696726 -45388806 - MER20 DNA MER1_type -4 215 1 2261 89 0 10 chr5 157697167 157697469 -45388063 - AluY SINE Alu -12 299 1 483 252 61 102 chr5 157698369 157698615 -45386917 - MIR SINE MIR -8 254 19 271 296 42 0 chr5 157698908 157698979 -45386553 - MIR SINE MIR -154 108 35 2267 96 0 37 chr5 157699117 157699441 -45386091 - AluSx SINE Alu 0 312 1 1457 140 3 157 chr5 157699441 157699669 -45385863 - AluJb SINE Alu -10 302 147 1974 101 40 4 chr5 157699669 157699947 -45385585 - AluSg SINE Alu -22 288 1 1457 140 3 157 chr5 157699947 157700075 -45385457 - AluJb SINE Alu -165 147 1 311 70 0 18 chr5 157700842 157700899 -45384633 - L1MB3 LINE L1 -1 6182 6127 4594 134 35 100 chr5 157700905 157701389 -45384143 - L1MB3 LINE L1 0 6183 5669 2293 117 0 0 chr5 157701389 157701698 -45383834 - AluSx SINE Alu -3 309 1 4594 134 35 100 chr5 157701698 157702172 -45383360 - L1MB3 LINE L1 -514 5669 5166 1971 131 3 24 chr5 157702172 157702470 -45383062 + AluJb SINE Alu 6 297 -15 4594 134 35 100 chr5 157702470 157702722 -45382810 - L1MB3 LINE L1 -1017 5166 4899 2247 96 3 3 chr5 157702722 157703013 -45382519 + AluSg SINE Alu 4 294 -16 4594 134 35 100 chr5 157703013 157703057 -45382475 - L1MB3 LINE L1 -1284 4899 4854 2361 87 3 0 chr5 157703057 157703355 -45382177 - AluSx SINE Alu -13 299 1 4594 134 35 100 chr5 157703355 157703387 -45382145 - L1MB3 LINE L1 -1329 4854 4821 215 0 67 0 chr5 157703387 157703417 -45382115 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4834 60 0 0 chr5 157703417 157703979 -45381553 - L1PA5 LINE L1 -12 6142 5581 4594 134 35 100 chr5 157703979 157704267 -45381265 - L1MB3 LINE L1 -1360 4823 4695 886 164 15 0 chr5 157704268 157704402 -45381130 - AluJo SINE Alu -176 136 1 616 229 12 42 chr5 157704402 157704568 -45380964 - L1MB3 LINE L1 -1441 4705 4545 22 56 0 0 chr5 157704569 157704605 -45380927 + AT_rich Low_complexity Low_complexity 1 36 0 236 198 11 33 chr5 157704998 157705089 -45380443 + (TTAA)n Simple_repeat Simple_repeat 1 89 0 1574 163 18 21 chr5 157705089 157705371 -45380161 - AluJb SINE Alu -31 281 1 395 114 0 43 chr5 157705378 157705448 -45380084 - L1MC4 LINE L1 0 8042 7976 2303 88 0 16 chr5 157705451 157705759 -45379773 - AluSx SINE Alu -9 303 1 1712 163 23 26 chr5 157705759 157706065 -45379467 - AluJb SINE Alu -7 305 1 1519 193 11 3 chr5 157706065 157706350 -45379182 - L1MB7 LINE L1 -71 6113 5827 1832 171 0 0 chr5 157706350 157706648 -45378884 - AluJb SINE Alu -14 298 1 1442 129 70 66 chr5 157706649 157707066 -45378466 - L1MB7 LINE L1 -591 5587 5188 1395 190 8 30 chr5 157707068 157707336 -45378196 - AluJo SINE Alu -1 311 50 917 111 6 23 chr5 157707340 157707511 -45378021 + (TTTC)n Simple_repeat Simple_repeat 1 168 0 731 32 0 11 chr5 157707527 157707622 -45377910 + (TCCCC)n Simple_repeat Simple_repeat 1 94 0 1595 165 23 0 chr5 157707633 157707899 -45377633 - AluJb SINE Alu -40 272 1 2451 166 46 19 chr5 157707899 157708423 -45377109 - L1MB7 LINE L1 -941 5205 4668 2376 93 6 0 chr5 157708899 157709210 -45376322 - AluSq SINE Alu 0 313 1 2108 101 0 7 chr5 157709747 157710034 -45375498 - AluSq SINE Alu -28 285 1 353 298 76 15 chr5 157710042 157710153 -45375379 - L2 LINE L2 0 3272 3150 1757 109 0 53 chr5 157710153 157710418 -45375114 + AluSg SINE Alu 29 279 -31 353 298 76 15 chr5 157710418 157710437 -45375095 - L2 LINE L2 -122 3150 3134 1422 153 16 86 chr5 157710493 157710807 -45374725 - AluJb SINE Alu -20 292 1 421 245 50 29 chr5 157711127 157711266 -45374266 + L2 LINE L2 2876 3017 -296 678 212 24 30 chr5 157711371 157711578 -45373954 + MSTD LTR MaLR 3 235 -161 244 356 113 17 chr5 157711578 157711755 -45373777 + L2 LINE L2 2724 2917 -397 270 73 0 0 chr5 157711829 157711870 -45373662 + (GA)n Simple_repeat Simple_repeat 2 42 0 865 208 0 66 chr5 157711912 157712095 -45373437 - AluJo SINE Alu -31 281 111 189 380 106 22 chr5 157712098 157712277 -45373255 - L2 LINE L2 -405 2909 2716 1524 185 17 3 chr5 157712879 157713166 -45372366 - AluJb SINE Alu -21 291 1 2006 137 3 3 chr5 157713745 157714037 -45371495 - AluSx SINE Alu -20 292 1 309 26 0 0 chr5 157714108 157714146 -45371386 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 10038 30 3 174 chr5 157714146 157715789 -45369743 - SVA Other Other -23 1363 1 2209 121 0 10 chr5 157715879 157716193 -45369339 - AluSx SINE Alu -1 311 1 2452 83 0 0 chr5 157716198 157716499 -45369033 - AluSg SINE Alu -9 301 1 1790 157 6 45 chr5 157717760 157718073 -45367459 - AluJo SINE Alu -11 301 1 320 340 42 42 chr5 157718617 157718832 -45366700 - MIR SINE MIR -46 216 2 3324 163 49 8 chr5 157719193 157719801 -45365731 - L1MB7 LINE L1 -19 6165 5533 1512 199 21 10 chr5 157719820 157720111 -45365421 - AluJo SINE Alu -18 294 1 1774 158 21 0 chr5 157720187 157720472 -45365060 - AluSx SINE Alu -21 291 1 41 58 0 0 chr5 157720859 157720928 -45364604 + AT_rich Low_complexity Low_complexity 1 69 0 467 270 7 29 chr5 157721335 157721472 -45364060 + MIR SINE MIR 6 139 -123 268 145 53 30 chr5 157721515 157721646 -45363886 + (TA)n Simple_repeat Simple_repeat 2 135 0 266 216 168 8 chr5 157721672 157721797 -45363735 - L1ME4a LINE L1 -165 5956 5812 482 259 237 5 chr5 157721831 157722055 -45363477 - L1ME4a LINE L1 -291 5830 5555 21 71 0 0 chr5 157722055 157722097 -45363435 + AT_rich Low_complexity Low_complexity 1 42 0 340 208 85 38 chr5 157722148 157722254 -45363278 - L2 LINE L2 0 3313 3203 261 0 0 0 chr5 157722385 157722414 -45363118 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2053 111 14 17 chr5 157722489 157722786 -45362746 - AluSq SINE Alu -17 296 1 792 165 23 8 chr5 157722808 157722941 -45362591 - AluJb SINE Alu -176 136 2 2070 122 3 3 chr5 157723573 157723869 -45361663 + AluSx SINE Alu 3 298 -14 520 254 148 101 chr5 157724146 157724528 -45361004 - L1MC4a LINE L1 -141 5980 5562 2267 108 0 10 chr5 157724528 157724834 -45360698 + AluSx SINE Alu 1 303 -9 520 254 148 101 chr5 157724834 157725013 -45360519 - L1MC4a LINE L1 -559 5562 5393 32 57 0 0 chr5 157725060 157725113 -45360419 + AT_rich Low_complexity Low_complexity 1 53 0 647 189 146 16 chr5 157726104 157726257 -45359275 + MER5A DNA MER1_type 4 182 -7 1420 76 84 62 chr5 157726411 157726496 -45359036 + MER30 DNA MER1_type 1 83 -147 1999 156 3 0 chr5 157726496 157726797 -45358735 + AluSx SINE Alu 1 302 -10 1420 76 84 62 chr5 157726797 157726936 -45358596 + MER30 DNA MER1_type 83 230 0 23 0 0 0 chr5 157727147 157727170 -45358362 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 157727625 157727647 -45357885 + AT_rich Low_complexity Low_complexity 1 22 0 1001 216 23 69 chr5 157728462 157728993 -45356539 + L1MA9 LINE L1 5777 6271 -29 2390 86 0 13 chr5 157729138 157729451 -45356081 - AluSx SINE Alu -3 309 1 783 114 94 34 chr5 157729468 157729617 -45355915 - MER1B DNA MER1_type 0 339 182 426 238 25 64 chr5 157729779 157729981 -45355551 - L1ME4a LINE L1 0 6121 5928 2463 67 7 0 chr5 157730011 157730310 -45355222 - AluY SINE Alu -10 301 1 2369 58 37 3 chr5 157730516 157730810 -45354722 + AluY SINE Alu 1 304 -7 277 309 110 0 chr5 157731296 157731432 -45354100 + L2 LINE L2 1299 1449 -1865 234 304 20 59 chr5 157731497 157731599 -45353933 - MER5A DNA MER1_type -19 170 73 874 220 140 15 chr5 157731768 157732032 -45353500 - L1MB7 LINE L1 -5 6179 5883 981 154 51 79 chr5 157732051 157732265 -45353267 - AluJo SINE Alu -104 208 1 2034 113 11 0 chr5 157732345 157732628 -45352904 + AluSq SINE Alu 17 302 -11 36 40 0 0 chr5 157732761 157732811 -45352721 + AT_rich Low_complexity Low_complexity 1 50 0 632 208 42 78 chr5 157733410 157733472 -45352060 - L1ME4a LINE L1 -17 6104 6041 2164 109 0 30 chr5 157733472 157733775 -45351757 - AluSx SINE Alu -18 294 1 632 208 42 78 chr5 157733775 157733996 -45351536 - L1ME4a LINE L1 -80 6041 5831 2086 123 23 13 chr5 157733998 157734308 -45351224 - AluSq SINE Alu 0 313 1 1818 165 0 16 chr5 157734310 157734613 -45350919 - AluJo SINE Alu -14 298 1 818 239 165 88 chr5 157734667 157735098 -45350434 - MLT1J LTR MaLR -4 507 44 466 197 0 0 chr5 157735107 157735178 -45350354 + AluS SINE Alu 2 72 -240 754 154 34 0 chr5 157735184 157735301 -45350231 + FRAM SINE Alu 26 146 -30 234 154 39 58 chr5 157735307 157735359 -45350173 - MLT1J LTR MaLR -458 53 3 1879 197 80 32 chr5 157735369 157735872 -45349660 - L1ME4a LINE L1 -331 5790 5264 2300 80 3 0 chr5 157736494 157736783 -45348749 + AluSg SINE Alu 7 296 -14 252 271 15 2 chr5 157737321 157737397 -45348135 - MLT1H LTR MaLR 0 567 479 919 111 16 0 chr5 157737403 157737529 -45348003 - AluSg/x SINE Alu -15 297 170 239 121 0 0 chr5 157737529 157737562 -45347970 - Alu SINE Alu -97 205 173 1105 205 0 5 chr5 157737653 157737858 -45347674 - AluJo SINE Alu -22 290 87 207 0 0 0 chr5 157737868 157737891 -45347641 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2209 109 3 0 chr5 157737975 157738287 -45347245 + AluSx SINE Alu 1 313 0 1640 177 20 10 chr5 157738607 157738912 -45346620 - AluJb SINE Alu -4 308 1 32691 46 6 1 chr5 157739066 157744968 -45340564 + L1PA5 LINE L1 11 6151 -3 690 47 0 0 chr5 157746050 157746136 -45339396 + (TA)n Simple_repeat Simple_repeat 2 87 0 2154 96 63 46 chr5 157746487 157746882 -45338650 + L1MA7 LINE L1 5890 6291 0 22 0 0 0 chr5 157746882 157746904 -45338628 + AT_rich Low_complexity Low_complexity 1 22 0 26 82 0 0 chr5 157747455 157747516 -45338016 + AT_rich Low_complexity Low_complexity 1 61 0 1870 185 0 0 chr5 157747624 157747927 -45337605 - AluJb SINE Alu -9 303 1 450 338 45 5 chr5 157748179 157748380 -45337152 - MIR SINE MIR -6 256 48 277 229 57 86 chr5 157748634 157748774 -45336758 - L1MC5 LINE L1 -54 7907 7772 27 81 0 0 chr5 157748788 157748850 -45336682 + AT_rich Low_complexity Low_complexity 1 62 0 2039 189 50 88 chr5 157748855 157749556 -45335976 - L1MC5 LINE L1 -226 7735 7066 2268 72 24 3 chr5 157749556 157749849 -45335683 + AluY SINE Alu 1 299 -12 2039 189 50 88 chr5 157749849 157749942 -45335590 - L1MC5 LINE L1 -895 7066 6971 1742 179 3 13 chr5 157749948 157750255 -45335277 - AluJo SINE Alu -8 304 1 1054 215 34 62 chr5 157750258 157750707 -45334825 - L1MC5 LINE L1 -937 6871 6565 233 163 23 0 chr5 157750692 157750735 -45334797 + L1MC5 LINE L1 6971 7014 -947 * 1808 148 0 52 chr5 157750755 157751079 -45334453 - AluSx SINE Alu -5 307 1 1524 141 21 0 chr5 157751120 157751354 -45334178 + AluSx SINE Alu 61 299 -13 232 249 60 104 chr5 157751399 157751600 -45333932 - L1MC4a LINE L1 -1338 6470 6279 747 100 0 0 chr5 157752240 157752350 -45333182 - L1MA5 LINE L1 -6 6294 6185 2110 115 7 7 chr5 157753216 157753521 -45332011 + AluSq SINE Alu 1 305 -8 22 0 0 0 chr5 157753610 157753632 -45331900 + AT_rich Low_complexity Low_complexity 1 22 0 2012 94 49 7 chr5 157753770 157754057 -45331475 + AluSq SINE Alu 1 299 -14 339 288 163 35 chr5 157754148 157754405 -45331127 - L1ME4a LINE L1 -171 5950 5661 21 57 0 0 chr5 157754408 157754443 -45331089 + AT_rich Low_complexity Low_complexity 1 35 0 795 189 7 0 chr5 157754559 157754702 -45330830 + FAM SINE Alu 20 163 -22 1073 146 0 0 chr5 157755169 157755334 -45330198 - AluSg/x SINE Alu 0 312 148 367 75 0 0 chr5 157755337 157755390 -45330142 + Alu SINE Alu 248 300 0 23 54 0 0 chr5 157755710 157755747 -45329785 + AT_rich Low_complexity Low_complexity 1 37 0 448 251 79 76 chr5 157755830 157756178 -45329354 - L1MC4a LINE L1 -342 5779 5494 229 167 0 45 chr5 157756192 157756258 -45329274 + CT-rich Low_complexity Low_complexity 3 65 0 1722 158 16 29 chr5 157756328 157756639 -45328893 + AluJb SINE Alu 2 308 -4 904 292 94 34 chr5 157756820 157756914 -45328618 - HAL1b LINE L1 -517 831 744 216 97 0 0 chr5 157756914 157756945 -45328587 + (TA)n Simple_repeat Simple_repeat 1 31 0 904 292 94 34 chr5 157756945 157757402 -45328130 - HAL1b LINE L1 -604 744 247 31 0 0 0 chr5 157757436 157757467 -45328065 + AT_rich Low_complexity Low_complexity 1 31 0 1738 178 6 29 chr5 157757718 157758033 -45327499 - AluJb SINE Alu -4 308 1 1451 127 23 0 chr5 157758078 157758298 -45327234 - MER46A DNA MER2_type -11 225 1 23 0 0 0 chr5 157760067 157760090 -45325442 + AT_rich Low_complexity Low_complexity 1 23 0 2153 105 0 13 chr5 157760129 157760434 -45325098 - AluSg SINE Alu -9 301 1 1292 164 0 14 chr5 157760544 157760763 -45324769 - AluJb SINE Alu -12 300 85 289 310 84 35 chr5 157760971 157761113 -45324419 - MER5A DNA MER1_type -40 149 1 34 42 0 0 chr5 157761580 157761628 -45323904 + AT_rich Low_complexity Low_complexity 1 48 0 1276 179 4 4 chr5 157761692 157761921 -45323611 - AluJo SINE Alu 0 312 84 207 105 26 0 chr5 157762649 157762687 -45322845 + A-rich Low_complexity Low_complexity 2 40 0 722 278 82 36 chr5 157763200 157763860 -45321672 + L1MEd LINE L1 950 1747 -743 329 280 76 86 chr5 157764521 157764721 -45320811 + L1MEd LINE L1 2655 2851 -3278 2135 105 3 0 chr5 157764721 157765016 -45320516 - AluSg SINE Alu -14 296 1 329 280 76 86 chr5 157765016 157765197 -45320335 + L1MEd LINE L1 2851 3032 -3097 207 100 0 0 chr5 157765455 157765485 -45320047 + (T)n Simple_repeat Simple_repeat 1 30 0 316 266 150 35 chr5 157765563 157765736 -45319796 + L1MEd LINE L1 3353 3545 -2584 2238 106 3 0 chr5 157765747 157766050 -45319482 - AluSp SINE Alu -9 304 1 2053 89 29 35 chr5 157766091 157766404 -45319128 - AluY SINE Alu 0 311 1 288 290 35 7 chr5 157766635 157766780 -45318752 + (TA)n Simple_repeat Simple_repeat 1 149 0 303 188 20 129 chr5 157766787 157766888 -45318644 - L1MC4 LINE L1 -1339 6703 6614 222 241 38 13 chr5 157766919 157766998 -45318534 + (TATG)n Simple_repeat Simple_repeat 3 83 0 207 100 0 0 chr5 157767017 157767047 -45318485 + (TA)n Simple_repeat Simple_repeat 1 30 0 313 140 0 0 chr5 157767101 157767151 -45318381 - MER66B LTR ERV1 -142 344 295 544 316 106 25 chr5 157767906 157768226 -45317306 - L2 LINE L2 -47 3266 2921 336 195 39 0 chr5 157770305 157770382 -45315150 - MER116 DNA Mariner 0 80 1 2301 96 3 3 chr5 157770552 157770864 -45314668 - AluSq SINE Alu -1 312 1 1870 126 53 26 chr5 157771814 157772155 -45313377 + L1ME3A LINE L1 5816 6165 -5 766 169 0 0 chr5 157772381 157772499 -45313033 + FLAM_C SINE Alu 1 118 -15 270 0 0 0 chr5 157772504 157772534 -45312998 + (CA)n Simple_repeat Simple_repeat 2 31 0 220 211 19 0 chr5 157772535 157772587 -45312945 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 2181 113 7 3 chr5 157773160 157773470 -45312062 - AluSx SINE Alu -1 311 1 2181 122 0 3 chr5 157775409 157775720 -45309812 + AluSq SINE Alu 1 310 -3 1903 150 14 0 chr5 157775724 157776011 -45309521 + AluSx SINE Alu 1 291 -21 1741 164 6 10 chr5 157776016 157776328 -45309204 + AluJb SINE Alu 2 312 0 1332 161 87 12 chr5 157776338 157776580 -45308952 + AluJo SINE Alu 7 266 -46 216 0 0 0 chr5 157776589 157776613 -45308919 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 27 29 0 0 chr5 157778142 157778176 -45307356 + AT_rich Low_complexity Low_complexity 1 34 0 241 152 0 0 chr5 157778192 157778238 -45307294 + LTR66 LTR ERVL 394 439 -171 219 69 0 0 chr5 157778238 157778267 -45307265 + (TA)n Simple_repeat Simple_repeat 2 30 0 1949 142 3 7 chr5 157778267 157778570 -45306962 - AluJb SINE Alu -9 303 2 297 271 161 8 chr5 157778858 157778976 -45306556 + L2 LINE L2 3178 3313 0 447 231 70 6 chr5 157779560 157779716 -45305816 + MER112 DNA MER1_type 2 167 -93 2131 112 0 10 chr5 157780175 157780471 -45305061 - AluSp SINE Alu -20 293 1 499 171 0 0 chr5 157781471 157781553 -45303979 + FLAM_A SINE Alu 40 121 -21 1573 219 22 6 chr5 157781983 157782349 -45303183 - L1MB7 LINE L1 -10 6174 5803 2454 51 14 0 chr5 157782356 157782651 -45302881 - AluY SINE Alu -12 299 1 333 68 0 0 chr5 157783545 157783589 -45301943 + (T)n Simple_repeat Simple_repeat 1 44 0 412 32 32 0 chr5 157784966 157785028 -45300504 + (CA)n Simple_repeat Simple_repeat 1 64 0 23 54 0 0 chr5 157786100 157786137 -45299395 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 157786175 157786203 -45299329 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 157786319 157786341 -45299191 + AT_rich Low_complexity Low_complexity 1 22 0 2190 124 0 0 chr5 157786969 157787275 -45298257 - AluSx SINE Alu -6 306 1 346 317 106 34 chr5 157787337 157787471 -45298061 - MIR SINE MIR -11 251 95 2241 92 6 13 chr5 157787471 157787785 -45297747 + AluSx SINE Alu 1 312 0 346 317 106 34 chr5 157787785 157787858 -45297674 - MIR SINE MIR -167 95 29 23 78 0 0 chr5 157788147 157788198 -45297334 + AT_rich Low_complexity Low_complexity 1 51 0 1992 79 75 14 chr5 157788200 157788479 -45297053 - AluSg SINE Alu -9 301 6 2080 108 3 14 chr5 157788571 157788866 -45296666 + AluY SINE Alu 1 292 -19 743 176 0 22 chr5 157789026 157789162 -45296370 + FLAM_A SINE Alu 1 133 0 334 255 57 19 chr5 157790469 157790575 -45294957 - MIR SINE MIR -11 251 142 2129 107 3 28 chr5 157790662 157790980 -45294552 - AluSx SINE Alu 0 312 3 2135 97 10 7 chr5 157791170 157791458 -45294074 - AluSx SINE Alu -23 289 1 757 328 24 9 chr5 157791581 157791838 -45293694 - MIR SINE MIR -3 259 2 21 36 0 0 chr5 157792775 157792803 -45292729 + AT_rich Low_complexity Low_complexity 1 28 0 1228 189 177 0 chr5 157793083 157793332 -45292200 - AluJo SINE Alu -9 293 1 823 138 0 0 chr5 157793451 157793567 -45291965 - FLAM_C SINE Alu -17 116 1 304 140 20 0 chr5 157794302 157794352 -45291180 + 5S rRNA rRNA 2 52 -69 2300 97 3 10 chr5 157794404 157794713 -45290819 - AluSp SINE Alu -6 307 1 25 31 0 0 chr5 157795178 157795210 -45290322 + AT_rich Low_complexity Low_complexity 1 32 0 2014 119 0 7 chr5 157795578 157795864 -45289668 + AluSq SINE Alu 1 284 -29 249 106 0 0 chr5 157795887 157795934 -45289598 + L1M4 LINE L1 3871 3917 -2229 2241 106 0 0 chr5 157797413 157797697 -45287835 - AluSg SINE Alu -6 304 21 213 39 0 0 chr5 157797918 157797944 -45287588 + (TG)n Simple_repeat Simple_repeat 1 26 0 1636 148 19 15 chr5 157797948 157798218 -45287314 - AluJo SINE Alu -29 283 13 454 314 92 82 chr5 157798270 157798788 -45286744 + L2 LINE L2 2722 3222 -50 799 227 18 18 chr5 157798788 157799008 -45286524 - L1ME2 LINE L1 -15 6149 5930 2225 100 0 3 chr5 157799060 157799361 -45286171 + AluSq SINE Alu 1 300 -13 24 0 0 0 chr5 157799741 157799765 -45285767 + AT_rich Low_complexity Low_complexity 1 24 0 203 228 0 70 chr5 157800130 157800187 -45285345 + MIR SINE MIR 99 151 -111 2379 92 7 0 chr5 157800633 157800938 -45284594 + AluSx SINE Alu 1 307 -5 1319 144 3 184 chr5 157800945 157801314 -45284218 + AluJo SINE Alu 1 302 0 1830 152 3 0 chr5 157801331 157801614 -45283918 + AluJb SINE Alu 13 296 -16 1938 136 0 27 chr5 157801795 157802096 -45283436 + AluJo SINE Alu 1 293 -19 2203 118 0 10 chr5 157802104 157802401 -45283131 + AluSx SINE Alu 3 296 -16 723 22 0 0 chr5 157802558 157802648 -45282884 + L1P LINE L1 3 92 -6054 25198 34 43 5 chr5 157802648 157805998 -45279534 + L1P LINE L1 617 4095 -2051 496 314 93 12 chr5 157806124 157806296 -45279236 + MIR SINE MIR 3 188 -74 1507 170 66 29 chr5 157806377 157806795 -45278737 + MLT1C LTR MaLR 6 467 0 521 177 0 0 chr5 157807959 157808055 -45277477 - HERVH LTR ERV1 -6096 1617 1522 3069 203 25 41 chr5 157808257 157809115 -45276417 - HERVH LTR ERV1 -5745 1514 735 456 228 11 0 chr5 157809375 157809467 -45276065 - AluJo SINE Alu -103 209 117 417 70 0 0 chr5 157809547 157809604 -45275928 + (TG)n Simple_repeat Simple_repeat 2 58 0 1206 172 14 0 chr5 157810199 157810414 -45275118 - AluSg/x SINE Alu -5 307 90 203 311 61 12 chr5 157810712 157810876 -45274656 + A-rich Low_complexity Low_complexity 2 173 0 * 207 184 32 72 chr5 157810763 157810888 -45274644 + (CAGAA)n Simple_repeat Simple_repeat 2 121 0 * 287 215 21 59 chr5 157810856 157811042 -45274490 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 * 383 250 22 39 chr5 157810989 157811228 -45274304 + A-rich Low_complexity Low_complexity 1 235 0 1567 185 21 28 chr5 157811426 157811713 -45273819 + AluJb SINE Alu 1 285 -27 7419 15 0 0 chr5 157812506 157813410 -45272122 + L1HS LINE L1 5236 6139 -16 318 26 0 0 chr5 157813410 157813449 -45272083 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 184 138 0 0 chr5 157813479 157813508 -45272024 - MER5B DNA MER1_type -129 49 21 375 205 36 0 chr5 157814218 157814301 -45271231 - MIR SINE MIR -10 252 167 2269 94 3 0 chr5 157814304 157814603 -45270929 + AluSq SINE Alu 1 300 -13 197 83 28 0 chr5 157814604 157814640 -45270892 + (TA)n Simple_repeat Simple_repeat 1 37 0 779 181 0 7 chr5 157815804 157815942 -45269590 + AluJo SINE Alu 1 137 -175 610 284 55 6 chr5 157816283 157816466 -45269066 + L2 LINE L2 2459 2650 -664 320 62 0 21 chr5 157817455 157817503 -45268029 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 1955 161 3 3 chr5 157817503 157817807 -45267725 - AluSx SINE Alu -8 304 1 736 200 171 80 chr5 157817859 157818102 -45267430 + MLT1C LTR MaLR 59 349 -118 2169 122 3 0 chr5 157818102 157818398 -45267134 - AluSx SINE Alu -5 307 11 736 200 171 80 chr5 157818398 157818529 -45267003 + MLT1C LTR MaLR 349 467 0 1103 241 139 10 chr5 157818761 157819163 -45266369 + MLT1C LTR MaLR 6 459 -8 1938 153 0 10 chr5 157819222 157819523 -45266009 - AluJo SINE Alu -14 298 1 16572 28 1 1 chr5 157819800 157822555 -45262977 + L1PA3 LINE L1 3389 6155 0 208 280 0 0 chr5 157822617 157822667 -45262865 + MIR SINE MIR 103 152 -56 230 216 45 23 chr5 157822671 157822759 -45262773 + L1M4 LINE L1 3755 3844 -2302 891 97 0 52 chr5 157822961 157823095 -45262437 + FLAM_C SINE Alu 1 127 -16 1990 173 12 62 chr5 157823237 157823310 -45262222 - L1MB8 LINE L1 0 6178 6103 2127 131 3 0 chr5 157823310 157823608 -45261924 + AluSx SINE Alu 1 299 -13 1990 173 12 62 chr5 157823608 157824032 -45261500 - L1MB8 LINE L1 -75 6103 5706 248 185 31 15 chr5 157824162 157824227 -45261305 - L1MB8 LINE L1 -2310 3836 3771 * 1881 147 20 131 chr5 157824223 157824628 -45260904 - L1M4 LINE L1 -470 5714 5266 324 119 0 15 chr5 157824628 157824695 -45260837 - L1MA9 LINE L1 -7 6305 6240 1881 147 20 131 chr5 157824695 157824714 -45260818 - L1M4 LINE L1 -918 5266 5247 1925 154 23 10 chr5 157824714 157825020 -45260512 - AluJo SINE Alu -2 310 1 1881 147 20 131 chr5 157825020 157825178 -45260354 - L1M4 LINE L1 -937 5247 5207 2118 136 7 0 chr5 157825178 157825473 -45260059 - AluSx SINE Alu -15 297 1 1881 147 20 131 chr5 157825473 157825553 -45259979 - L1M4 LINE L1 -977 5207 5120 274 123 35 0 chr5 157825714 157825771 -45259761 + A-rich Low_complexity Low_complexity 2 60 0 2039 87 22 68 chr5 157826434 157826757 -45258775 + AluSg SINE Alu 1 308 -2 1771 177 3 13 chr5 157826873 157827178 -45258354 - AluJb SINE Alu -10 302 1 1761 113 117 8 chr5 157827201 157827466 -45258066 + AluSg1 SINE Alu 1 294 -15 185 125 0 42 chr5 157829744 157829792 -45255740 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 1969 156 0 9 chr5 157831815 157832130 -45253402 - AluSx SINE Alu 0 312 1 1876 164 7 3 chr5 157832914 157833207 -45252325 + AluSx SINE Alu 1 294 -18 2294 165 53 26 chr5 157833218 157833542 -45251990 + L1MB8 LINE L1 5490 5835 -349 2299 93 7 3 chr5 157833542 157833842 -45251690 + AluSg SINE Alu 1 301 -9 2294 165 53 26 chr5 157833842 157834025 -45251507 + L1MB8 LINE L1 5835 6011 -173 1007 189 0 6 chr5 157834048 157834217 -45251315 - AluJb SINE Alu -9 303 136 757 157 7 13 chr5 157834218 157834371 -45251161 + L1MB8 LINE L1 6026 6177 -1 1845 133 42 3 chr5 157834441 157834726 -45250806 + AluSx SINE Alu 1 296 -16 1837 135 6 69 chr5 157834781 157834932 -45250600 + AluJb SINE Alu 1 121 -191 2382 75 0 3 chr5 157834932 157835240 -45250292 + AluY SINE Alu 1 307 -4 1837 135 6 69 chr5 157835240 157835421 -45250111 + AluJb SINE Alu 121 312 0 1123 134 20 85 chr5 157835661 157835726 -45249806 + L1MB8 LINE L1 5930 5998 -180 2467 77 0 0 chr5 157835726 157836026 -45249506 + AluY SINE Alu 1 300 -11 1123 134 20 85 chr5 157836026 157836207 -45249325 + L1MB8 LINE L1 5998 6160 -18 914 90 15 15 chr5 157837390 157837523 -45248009 + FLAM_C SINE Alu 1 133 0 225 0 0 0 chr5 157837702 157837727 -45247805 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1997 114 4 0 chr5 157837735 157838008 -45247524 - AluSx SINE Alu -38 274 1 2328 88 10 0 chr5 157838357 157838653 -45246879 + AluSp SINE Alu 1 299 -14 22 70 0 0 chr5 157840471 157840514 -45245018 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 157842748 157842770 -45242762 + AT_rich Low_complexity Low_complexity 1 22 0 434 267 67 15 chr5 157843223 157843358 -45242174 + MIR3 SINE MIR 3 144 -64 2423 113 0 0 chr5 157844027 157844338 -45241194 + AluSx SINE Alu 1 311 -1 2555 70 0 3 chr5 157844428 157844729 -45240803 + AluSx SINE Alu 1 300 -12 626 308 34 13 chr5 157845794 157846031 -45239501 + MIR SINE MIR 19 260 -2 26 104 0 0 chr5 157846115 157846211 -45239321 + AT_rich Low_complexity Low_complexity 1 96 0 876 216 0 6 chr5 157846264 157846440 -45239092 - AluJ SINE Alu -18 294 120 2564 70 0 3 chr5 157846456 157846758 -45238774 + AluSx SINE Alu 1 301 -11 263 206 68 41 chr5 157847250 157847323 -45238209 + MER5B DNA MER1_type 88 162 -16 2286 123 0 0 chr5 157847324 157847632 -45237900 - AluSx SINE Alu -4 308 1 682 183 35 9 chr5 157848041 157848156 -45237376 - AluJ SINE Alu -184 118 1 2097 138 0 3 chr5 157848785 157849083 -45236449 + AluSx SINE Alu 1 297 -15 2173 107 42 0 chr5 157849085 157849374 -45236158 + AluSp SINE Alu 1 301 -12 1764 176 17 10 chr5 157849383 157849678 -45235854 + AluJo SINE Alu 1 297 -15 237 208 0 0 chr5 157849719 157849767 -45235765 + MER5A DNA MER1_type 136 183 -6 1798 170 32 0 chr5 157849770 157850053 -45235479 + AluJb SINE Alu 1 292 -20 1828 132 0 4 chr5 157850587 157850853 -45234679 - AluSx SINE Alu -47 265 1 287 247 52 52 chr5 157850878 157850975 -45234557 + MIR SINE MIR 2 98 -164 231 349 30 8 chr5 157854976 157855108 -45230424 + L2 LINE L2 1356 1490 -1824 220 303 61 20 chr5 157855099 157855198 -45230334 - MIR3 SINE MIR -6 202 100 * 259 259 12 59 chr5 157855925 157856010 -45229522 - L2 LINE L2 0 3313 3233 2518 99 0 0 chr5 157856015 157856328 -45229204 + AluSp SINE Alu 1 313 0 1067 206 0 16 chr5 157856331 157856515 -45229017 + AluJo SINE Alu 1 181 -131 364 250 196 0 chr5 157856516 157856700 -45228832 - L2 LINE L2 -74 3239 3020 465 241 68 62 chr5 157856710 157856838 -45228694 + MIR SINE MIR 73 204 -58 798 146 23 0 chr5 157856838 157856968 -45228564 + FLAM_C SINE Alu 1 133 0 465 241 68 62 chr5 157856968 157857001 -45228531 + MIR SINE MIR 204 235 -27 1003 290 157 13 chr5 157857019 157857615 -45227917 - L2 LINE L2 -249 3023 2344 329 221 42 53 chr5 157857616 157857711 -45227821 + L2 LINE L2 689 782 -2532 1561 269 296 24 chr5 157857715 157858541 -45226991 + L2 LINE L2 958 1558 -1756 2143 92 46 0 chr5 157858541 157858822 -45226710 - AluSg SINE Alu -16 294 1 1561 269 296 24 chr5 157858822 157858888 -45226644 + L2 LINE L2 1558 1605 -1709 2015 117 48 0 chr5 157858888 157859179 -45226353 - AluSx SINE Alu -7 305 1 1561 269 296 24 chr5 157859179 157859656 -45225876 + L2 LINE L2 1605 1951 -1363 816 182 115 5 chr5 157859656 157859848 -45225684 + MER20 DNA MER1_type 4 216 -3 1561 269 296 24 chr5 157859848 157859877 -45225655 + L2 LINE L2 1951 2739 -575 270 318 100 23 chr5 157859982 157860183 -45225349 + L2 LINE L2 2720 2992 -321 395 284 15 37 chr5 157860278 157860412 -45225120 + L2 LINE L2 3182 3312 -1 304 323 70 13 chr5 157860416 157860574 -45224958 - L2 LINE L2 -971 2343 2177 601 262 52 91 chr5 157861492 157861778 -45223754 + L2 LINE L2 2993 3267 -5 648 252 144 22 chr5 157862628 157862850 -45222682 - MIR SINE MIR 0 262 14 545 322 181 18 chr5 157862950 157863558 -45221974 + L2 LINE L2 2560 3269 -3 510 275 143 8 chr5 157863589 157863833 -45221699 - MER102a DNA MER1_type -9 321 45 2279 103 0 13 chr5 157866607 157866908 -45218624 + AluSc SINE Alu 1 297 -12 192 328 75 0 chr5 157869127 157869194 -45216338 - L2 LINE L2 -52 3220 3149 373 304 106 19 chr5 157869742 157869975 -45215557 - L2 LINE L2 -221 3051 2797 378 289 0 53 chr5 157873211 157873325 -45212207 + MER5A DNA MER1_type 81 188 -1 590 267 91 5 chr5 157873338 157873525 -45212007 + MIR SINE MIR 28 230 -32 541 294 102 5 chr5 157874096 157874283 -45211249 - MIR SINE MIR 0 262 58 283 324 68 14 chr5 157874352 157874500 -45211032 + L2 LINE L2 2824 2979 -293 396 300 101 63 chr5 157874567 157874804 -45210728 + L2 LINE L2 2985 3230 -42 433 285 217 19 chr5 157875669 157875876 -45209656 + MIR SINE MIR 2 249 -13 2286 114 0 3 chr5 157876137 157876443 -45209089 - AluSx SINE Alu -7 305 1 2432 85 0 0 chr5 157876453 157876747 -45208785 - AluSp SINE Alu -19 294 1 626 311 158 35 chr5 157876799 157877288 -45208244 + L2 LINE L2 2725 3272 0 457 265 79 70 chr5 157877774 157877989 -45207543 - MIR SINE MIR 0 262 46 356 226 201 6 chr5 157878174 157878333 -45207199 - L1MC5 LINE L1 -30 7931 7742 2372 117 0 0 chr5 157878390 157878698 -45206834 - AluSx SINE Alu -4 308 1 216 284 60 0 chr5 157878805 157878872 -45206660 + MIR SINE MIR 151 221 -41 23 33 0 0 chr5 157879363 157879393 -45206139 + AT_rich Low_complexity Low_complexity 1 30 0 2167 131 0 0 chr5 157879414 157879704 -45205828 + AluSx SINE Alu 5 294 -18 563 122 56 0 chr5 157879738 157879845 -45205687 + L1M4 LINE L1 5221 5333 -813 1482 296 99 29 chr5 157879846 157880613 -45204919 + L1MB5 LINE L1 1 821 -5721 241 221 11 11 chr5 157880617 157880712 -45204820 + CT-rich Low_complexity Low_complexity 2 96 0 363 255 66 0 chr5 157880735 157880841 -45204691 + L1MB5 LINE L1 817 929 -5613 516 202 0 0 chr5 157880852 157880956 -45204576 + L1MB5 LINE L1 1712 1815 -4831 1467 126 39 8 chr5 157880966 157881220 -45204312 - MER2 DNA MER2_type -1 344 83 2214 121 0 3 chr5 157881251 157881556 -45203976 - AluSx SINE Alu -8 304 1 1045 111 0 0 chr5 157881556 157881691 -45203841 - AluSq/x SINE Alu -177 135 1 1389 212 40 0 chr5 157881704 157881982 -45203550 - AluJo SINE Alu -23 289 1 428 215 0 21 chr5 157881983 157882076 -45203456 - MER2 DNA MER2_type -251 94 4 1285 220 218 6 chr5 157882079 157882557 -45202975 + L1MB5 LINE L1 1840 2418 -4228 729 186 16 16 chr5 157882561 157882720 -45202812 - FLAM_A SINE Alu 0 133 2 2047 82 52 4 chr5 157882746 157883049 -45202483 + AluSc SINE Alu 1 316 0 227 200 0 0 chr5 157883058 157883103 -45202429 + L1MB5 LINE L1 2422 2466 -4180 1110 178 0 0 chr5 157883110 157883284 -45202248 - AluJb SINE Alu -6 306 133 3258 214 53 52 chr5 157883522 157883741 -45201791 + L1MB5 LINE L1 2542 2759 -3885 1739 195 10 3 chr5 157883741 157884044 -45201488 - AluJb SINE Alu -7 305 1 3258 214 53 52 chr5 157884044 157884352 -45201180 + L1MB5 LINE L1 2759 3065 -3579 867 179 0 8 chr5 157884352 157884486 -45201046 - FLAM_A SINE Alu 0 133 1 3258 214 53 52 chr5 157884486 157885122 -45200410 + L1MB5 LINE L1 3065 3715 -2929 2033 149 7 0 chr5 157886181 157886483 -45199049 - AluSc SINE Alu -5 304 1 5832 213 23 90 chr5 157886512 157886775 -45198757 + L1MB5 LINE L1 3721 4000 -2644 2201 110 10 10 chr5 157886775 157887076 -45198456 + AluSg SINE Alu 1 301 -9 5832 213 23 90 chr5 157887076 157887922 -45197610 + L1MB5 LINE L1 4000 4901 -1743 2443 68 0 7 chr5 157887922 157888216 -45197316 + AluSg1 SINE Alu 1 292 -17 1643 177 67 3 chr5 157888225 157888508 -45197024 - AluJb SINE Alu -11 301 1 5832 213 23 90 chr5 157888508 157888556 -45196976 + L1MB5 LINE L1 4909 4959 -1685 2385 88 3 0 chr5 157888556 157888850 -45196682 - AluSx SINE Alu -17 295 1 5832 213 23 90 chr5 157888850 157889219 -45196313 + L1MB5 LINE L1 4959 5351 -1293 2405 92 3 0 chr5 157889219 157889523 -45196009 + AluSg SINE Alu 1 305 -5 5832 213 23 90 chr5 157889523 157889589 -45195943 + L1MB5 LINE L1 5351 5420 -1224 1731 171 10 27 chr5 157889589 157889881 -45195651 + AluJb SINE Alu 1 287 -25 186 43 0 0 chr5 157889883 157889906 -45195626 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 5832 213 23 90 chr5 157889906 157890403 -45195129 + L1MB5 LINE L1 5421 5687 -957 924 186 60 6 chr5 157890403 157890586 -45194946 + AluSq SINE Alu 121 313 0 2531 149 17 11 chr5 157890586 157891119 -45194413 + L1MB5 LINE L1 5699 6233 -445 489 123 85 66 chr5 157891114 157891220 -45194312 + L1MB5 LINE L1 6557 6664 -8 * 613 209 2 2 chr5 157891233 157891371 -45194161 + L1MB7 LINE L1 5592 5729 -454 740 220 0 0 chr5 157891375 157891507 -45194025 + FLAM_C SINE Alu 2 133 0 2385 113 7 0 chr5 157891522 157891831 -45193701 + AluSx SINE Alu 1 311 -1 2468 156 24 4 chr5 157891848 157892303 -45193229 + L1MB7 LINE L1 5716 6179 -5 512 258 173 60 chr5 157892880 157893305 -45192227 - MLT2C1 LTR ERVL 0 464 20 360 0 0 0 chr5 157893308 157893348 -45192184 + (CA)n Simple_repeat Simple_repeat 2 41 0 1202 154 27 18 chr5 157894081 157894301 -45191231 - AluJb SINE Alu -6 306 85 21 0 0 0 chr5 157894302 157894323 -45191209 + AT_rich Low_complexity Low_complexity 1 21 0 253 313 72 0 chr5 157894962 157895045 -45190487 - MIR SINE MIR -61 147 59 35 0 0 0 chr5 157896122 157896157 -45189375 + AT_rich Low_complexity Low_complexity 1 35 0 5917 17 0 0 chr5 157896215 157896874 -45188658 - L1PA3 LINE L1 -3 6152 5494 4288 52 0 0 chr5 157896874 157897389 -45188143 - L1P LINE L1 -5625 521 7 410 74 0 0 chr5 157897400 157897454 -45188078 - AluSp/q SINE Alu -20 293 240 553 179 81 16 chr5 157898513 157898636 -45186896 - FLAM_A SINE Alu 0 133 3 185 259 103 0 chr5 157899058 157899085 -45186447 + L2 LINE L2 2690 2713 -601 1868 100 4 0 chr5 157899085 157899344 -45186188 + AluSx SINE Alu 15 274 -38 185 259 103 0 chr5 157899344 157899374 -45186158 + L2 LINE L2 2713 2753 -561 2281 72 3 0 chr5 157899466 157899757 -45185775 + AluSq SINE Alu 1 292 -21 259 189 38 0 chr5 157899997 157900050 -45185482 + MER112 DNA MER1_type 2 56 -204 213 272 148 37 chr5 157900183 157900264 -45185268 + L2 LINE L2 3222 3311 -2 213 272 261 11 chr5 157900320 157900412 -45185120 + MIR SINE MIR 49 163 -99 1352 169 35 41 chr5 157903089 157903379 -45182153 - AluJb SINE Alu -24 288 1 1725 126 14 34 chr5 157903392 157903686 -45181846 - AluJb SINE Alu -24 288 1 2350 82 0 0 chr5 157903696 157903999 -45181533 - AluSq SINE Alu -10 303 1 194 310 101 44 chr5 157905167 157905325 -45180207 + MIR SINE MIR 31 197 -65 222 235 0 0 chr5 157906567 157906618 -45178914 + T-rich Low_complexity Low_complexity 1 51 0 1538 156 20 13 chr5 157907011 157907190 -45178342 - AluJb SINE Alu -9 303 120 189 0 0 0 chr5 157907190 157907211 -45178321 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1538 156 20 13 chr5 157907211 157907332 -45178200 - AluJb SINE Alu -192 120 1 4187 159 4 58 chr5 157907840 157908154 -45177378 - L1MB3 LINE L1 -3 6180 5850 2189 88 3 0 chr5 157908154 157908449 -45177083 - AluSx SINE Alu -16 296 1 4187 159 4 58 chr5 157908449 157908873 -45176659 - L1MB3 LINE L1 -333 5850 5489 285 29 0 0 chr5 157908873 157908907 -45176625 + (TG)n Simple_repeat Simple_repeat 2 35 0 4187 159 4 58 chr5 157908907 157908991 -45176541 - L1MB3 LINE L1 -694 5489 5402 520 270 149 37 chr5 157908962 157909554 -45175978 - L1M4 LINE L1 -3093 3755 3098 * 918 216 0 6 chr5 157909757 157909933 -45175599 - FAM SINE Alu 0 175 1 1908 121 0 7 chr5 157909978 157910267 -45175265 - AluSx SINE Alu -25 287 1 2224 75 3 34 chr5 157910360 157910681 -45174851 - AluY SINE Alu 0 311 1 203 211 0 0 chr5 157911005 157911043 -45174489 - L2 LINE L2 -89 3224 3187 305 231 46 19 chr5 157911264 157911372 -45174160 + L1MC3 LINE L1 5771 5881 -1927 976 177 109 82 chr5 157911591 157911736 -45173796 + AluJo SINE Alu 1 141 -161 1935 125 0 7 chr5 157911736 157912033 -45173499 + AluSx SINE Alu 1 295 -17 976 177 109 82 chr5 157912033 157912181 -45173351 + AluJo SINE Alu 141 302 0 690 146 16 16 chr5 157912763 157912886 -45172646 + L1MC3 LINE L1 6737 6859 -926 225 282 225 9 chr5 157912981 157913194 -45172338 - HAL1b LINE L1 -965 383 125 2089 116 0 0 chr5 157913233 157913525 -45172007 - AluSg SINE Alu -18 292 1 352 307 57 66 chr5 157913533 157913865 -45171667 - L1M4 LINE L1 -4788 2061 1733 22 0 0 0 chr5 157914245 157914267 -45171265 + AT_rich Low_complexity Low_complexity 1 22 0 454 131 12 60 chr5 157914295 157914379 -45171153 - MLT1A2 LTR MaLR 0 374 295 294 321 71 0 chr5 157914421 157914533 -45170999 + L2 LINE L2 3144 3263 -9 230 287 79 50 chr5 157914538 157914639 -45170893 + L3 LINE CR1 1389 1492 -85 207 261 0 0 chr5 157915230 157915304 -45170228 + GA-rich Low_complexity Low_complexity 1 74 0 340 235 29 0 chr5 157915595 157915663 -45169869 + L2 LINE L2 3201 3270 -2 263 309 10 21 chr5 157917559 157917656 -45167876 + L3 LINE CR1 1247 1342 -235 2235 98 0 3 chr5 157917716 157918021 -45167511 - AluSg1 SINE Alu -4 305 2 258 55 18 55 chr5 157918274 157918329 -45167203 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 2184 82 34 0 chr5 157918417 157918711 -45166821 - AluSq SINE Alu -9 304 1 2129 91 34 0 chr5 157918719 157919015 -45166517 - AluSp SINE Alu -6 307 2 243 232 333 0 chr5 157919210 157919309 -45166223 + MIR SINE MIR 29 160 -102 215 303 67 0 chr5 157919511 157919600 -45165932 - L2 LINE L2 -5 3308 3214 213 39 0 0 chr5 157919923 157919949 -45165583 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1997 117 4 0 chr5 157919951 157920232 -45165300 - AluSp SINE Alu -31 282 1 731 259 12 0 chr5 157920263 157920433 -45165099 + FRAM SINE Alu 1 40 0 35 0 0 0 chr5 157920460 157920495 -45165037 + AT_rich Low_complexity Low_complexity 1 35 0 202 213 43 0 chr5 157920535 157920582 -45164950 + L2 LINE L2 3206 3254 -18 263 245 91 35 chr5 157920589 157920732 -45164800 + L3 LINE CR1 1192 1342 -235 183 244 22 0 chr5 157921236 157921281 -45164251 + L2 LINE L2 3229 3274 -39 1938 132 73 78 chr5 157921412 157921838 -45163694 + MER4B LTR ERV1 1 424 -186 488 153 0 34 chr5 157921838 157921956 -45163576 + CT-rich Low_complexity Low_complexity 4 117 0 3729 58 23 46 chr5 157921957 157922478 -45163054 - LTR10D LTR ERV1 -2 511 3 2203 81 26 7 chr5 157922484 157922791 -45162741 - AluSq SINE Alu 0 313 1 1467 73 31 0 chr5 157922792 157922984 -45162548 + MER4E LTR ERV1 569 766 0 208 223 19 48 chr5 157923270 157923373 -45162159 + (CCCCG)n Simple_repeat Simple_repeat 1 100 0 466 291 83 45 chr5 157923883 157924220 -45161312 + L2 LINE L2 2417 2766 -548 2211 67 44 7 chr5 157924474 157924772 -45160760 - AluY SINE Alu -1 310 2 5113 186 29 54 chr5 157924779 157925723 -45159809 + L1M3 LINE L1 4095 5061 -1122 2040 133 0 3 chr5 157925723 157926031 -45159501 + AluSg SINE Alu 1 307 -3 5113 186 29 54 chr5 157926031 157926146 -45159386 + L1M3 LINE L1 5061 5177 -1006 1627 164 10 30 chr5 157926146 157926445 -45159087 + AluJo SINE Alu 3 295 -17 5113 186 29 54 chr5 157926445 157926638 -45158894 + L1M3 LINE L1 5177 5373 -810 1642 181 17 0 chr5 157926638 157926937 -45158595 + AluJb SINE Alu 3 306 -6 5113 186 29 54 chr5 157926937 157927016 -45158516 + L1M3 LINE L1 5373 5452 -731 1901 106 9 75 chr5 157927016 157927152 -45158380 + AluSx SINE Alu 1 144 -168 1716 150 42 0 chr5 157927152 157927438 -45158094 + AluSx SINE Alu 1 298 -14 1901 106 9 75 chr5 157927438 157927621 -45157911 + AluSx SINE Alu 144 299 -13 5113 186 29 54 chr5 157927621 157927810 -45157722 + L1M3 LINE L1 5452 5582 -601 6638 144 25 26 chr5 157927811 157928021 -45157511 + L1MC1 LINE L1 4661 4870 -3172 1968 115 27 10 chr5 157928021 157928317 -45157215 + AluSp SINE Alu 1 301 -12 6638 144 25 26 chr5 157928317 157928364 -45157168 + L1MC1 LINE L1 4870 4916 -3126 1795 60 4 0 chr5 157928364 157928597 -45156935 - L1PA14 LINE L1 0 6161 5928 6638 144 25 26 chr5 157928597 157929114 -45156418 + L1MC1 LINE L1 4916 5432 -2610 3899 124 28 2 chr5 157929114 157929679 -45155853 + LTR19B LTR ERV1 1 580 0 6638 144 25 26 chr5 157929679 157930572 -45154960 + L1MC1 LINE L1 5432 8036 -6 1807 144 0 7 chr5 157930611 157930896 -45154636 + AluJb SINE Alu 11 293 -19 373 154 15 0 chr5 157930909 157930987 -45154545 + L1M3 LINE L1 5593 5657 -526 617 208 36 48 chr5 157931005 157931116 -45154416 + L2 LINE L2 1983 2093 -1221 8717 61 6 1 chr5 157931116 157932182 -45153350 + MER11C LTR ERVK 1 1071 0 617 208 36 48 chr5 157932182 157932238 -45153294 + L2 LINE L2 2093 2148 -1166 249 108 0 0 chr5 157932596 157932633 -45152899 + (A)n Simple_repeat Simple_repeat 1 37 0 818 154 0 15 chr5 157932758 157932888 -45152644 - FLAM_C SINE Alu -4 129 2 3483 91 14 16 chr5 157932937 157933431 -45152101 + LTR15 LTR ERV1 1 493 0 219 244 0 0 chr5 157933494 157933539 -45151993 + L2 LINE L2 2162 2206 -1108 181 250 0 0 chr5 157933539 157933583 -45151949 + L2 LINE L2 2440 2483 -831 21 82 0 0 chr5 157933583 157933632 -45151900 + AT_rich Low_complexity Low_complexity 1 49 0 822 125 0 17 chr5 157933632 157933752 -45151780 - FLAM_C SINE Alu -15 118 1 336 333 68 8 chr5 157933753 157933885 -45151647 + L2 LINE L2 2474 2613 -701 901 150 39 77 chr5 157933891 157933956 -45151576 - L1MB7 LINE L1 -10 6174 6108 2053 104 4 0 chr5 157933956 157934267 -45151265 + AluSg SINE Alu 1 312 0 901 150 39 77 chr5 157934267 157934433 -45151099 - L1MB7 LINE L1 -76 6108 5951 1352 128 202 16 chr5 157934442 157934699 -45150833 - AluSx SINE Alu -7 305 1 2105 127 3 0 chr5 157934716 157935023 -45150509 - AluSg SINE Alu -2 308 1 1102 252 78 38 chr5 157935024 157935645 -45149887 + L2 LINE L2 2593 3313 0 429 286 40 52 chr5 157935820 157936072 -45149460 + L2 LINE L2 2066 2314 -1000 403 153 0 0 chr5 157936100 157936159 -45149373 - Alu SINE Alu -5 295 237 813 54 0 0 chr5 157936159 157936271 -45149261 - MER41-int LTR ERV1 -2216 3730 3619 873 167 0 0 chr5 157936273 157936417 -45149115 - AluSx SINE Alu -13 299 156 211 229 0 0 chr5 157936473 157936521 -45149011 + T-rich Low_complexity Low_complexity 2 49 0 963 138 0 7 chr5 157936571 157936723 -45148809 - AluSx SINE Alu -161 151 1 5681 93 45 11 chr5 157936723 157937596 -45147936 - MER66-int LTR ERV1 -2334 3612 2721 1176 119 0 0 chr5 157937617 157937785 -45147747 + AluSg/x SINE Alu 133 300 -12 1227 112 0 6 chr5 157937883 157938061 -45147471 - AluSp SINE Alu -16 297 121 454 169 0 22 chr5 157938061 157938150 -45147382 - MER66-int LTR ERV1 -2689 3987 3901 656 208 31 8 chr5 157938158 157938288 -45147244 - MER41C LTR ERV1 -421 133 1 1883 134 3 7 chr5 157938302 157938611 -45146921 - AluSx SINE Alu 0 308 1 1236 182 10 0 chr5 157938611 157938820 -45146712 - Tigger7 DNA MER2_type -349 384 174 2003 141 3 0 chr5 157938858 157939164 -45146368 + AluSx SINE Alu 1 307 -5 25 0 0 0 chr5 157939174 157939199 -45146333 + AT_rich Low_complexity Low_complexity 1 25 0 996 97 7 0 chr5 157939199 157939344 -45146188 + MER2 DNA MER2_type 83 228 -117 * 1125 115 60 0 chr5 157939340 157939522 -45146010 + Tigger4(Zombi) DNA MER2_type 2538 2730 -1 1905 107 4 0 chr5 157939522 157939784 -45145748 + AluSp SINE Alu 1 263 -50 834 59 0 0 chr5 157939886 157939988 -45145544 - AluS SINE Alu -211 102 1 213 259 0 0 chr5 157940516 157940570 -45144962 + C-rich Low_complexity Low_complexity 1 54 0 714 206 72 11 chr5 157941150 157941330 -45144202 - L1MC5 LINE L1 -48 7913 7723 1152 219 3 31 chr5 157941330 157941617 -45143915 - L1MB8 LINE L1 -106 6072 5794 312 310 56 42 chr5 157941622 157941835 -45143697 - MER21A LTR ERV1 -149 782 567 2096 262 76 42 chr5 157941855 157942468 -45143064 - MER21B LTR ERV1 -125 738 96 2926 163 24 0 chr5 157942468 157942929 -45142603 + MER70A LTR ERVL 1 472 0 2096 262 76 42 chr5 157942929 157943029 -45142503 - MER21B LTR ERV1 -767 96 1 8192 223 67 70 chr5 157943288 157944151 -45141381 - MER21B-int LTR ERV1 -63 4128 3264 871 183 20 0 chr5 157944151 157944304 -45141228 - FRAM SINE Alu -7 159 4 8192 223 67 70 chr5 157944304 157944592 -45140940 - MER21B-int LTR ERV1 -927 3264 2977 2012 118 3 7 chr5 157944592 157944896 -45140636 + AluSx SINE Alu 1 303 -9 8192 223 67 70 chr5 157944896 157945558 -45139974 - MER21B-int LTR ERV1 -1214 2977 2314 2046 93 0 24 chr5 157945558 157945893 -45139639 + AluSx SINE Alu 1 328 0 8192 223 67 70 chr5 157945893 157946400 -45139132 - MER21B-int LTR ERV1 -1877 2314 1811 2043 119 3 3 chr5 157946400 157946703 -45138829 - AluSg SINE Alu -7 303 1 8192 223 67 70 chr5 157946703 157946842 -45138690 - MER21B-int LTR ERV1 -2380 1811 1673 445 291 0 8 chr5 157946921 157947038 -45138494 - MER21-int LTR ERV1 -2394 1797 1682 757 249 102 85 chr5 157947157 157947499 -45138033 - MER21-int LTR ERV1 -2554 1637 1290 455 141 0 0 chr5 157947501 157947565 -45137967 - AluS SINE Alu -19 293 230 344 167 59 88 chr5 157947569 157947611 -45137921 + MIR SINE MIR 140 182 -80 575 201 130 12 chr5 157947611 157947780 -45137752 + MER5A DNA MER1_type 1 189 0 344 167 59 88 chr5 157947780 157947839 -45137693 + MIR SINE MIR 182 238 -24 219 161 36 89 chr5 157947812 157947868 -45137664 + L2 LINE L2 3257 3309 -4 * 266 130 0 0 chr5 157948373 157948419 -45137113 - L1MB5 LINE L1 -7 6167 6122 1914 139 3 19 chr5 157948420 157948706 -45136826 + AluSx SINE Alu 1 283 -29 219 36 0 0 chr5 157948706 157948734 -45136798 + (CA)n Simple_repeat Simple_repeat 1 28 0 1914 139 3 19 chr5 157948734 157948764 -45136768 + AluSx SINE Alu 283 312 0 523 75 5 4 chr5 157948767 157948979 -45136553 + AluSq SINE Alu 1 295 -18 3894 186 14 31 chr5 157948979 157949224 -45136308 - L1MB5 LINE L1 -50 6124 5876 1971 131 3 0 chr5 157949224 157949547 -45135985 - AluSq SINE Alu 0 324 1 3894 186 14 31 chr5 157949547 157950114 -45135418 - L1MB5 LINE L1 -298 5876 5325 1315 141 9 9 chr5 157950129 157950356 -45135176 + AluJo SINE Alu 79 305 -7 2022 193 16 34 chr5 157950361 157950859 -45134673 - L1MB5 LINE L1 -841 5305 4817 1680 211 35 18 chr5 157950882 157951336 -45134196 - L1MB5 LINE L1 -1600 4546 4085 2154 121 0 0 chr5 157951337 157951632 -45133900 + AluSx SINE Alu 1 298 -14 423 0 0 0 chr5 157951632 157951679 -45133853 + (CA)n Simple_repeat Simple_repeat 2 48 0 938 226 100 10 chr5 157951692 157951993 -45133539 - L1MB5 LINE L1 -2527 3619 3292 320 180 20 30 chr5 157951995 157952095 -45133437 + CT-rich Low_complexity Low_complexity 4 102 0 958 155 112 29 chr5 157952100 157952306 -45133226 - AluJo SINE Alu -6 306 84 455 183 104 0 chr5 157952308 157952472 -45133060 - L1MB5 LINE L1 -2848 3298 3118 528 206 0 0 chr5 157952486 157952583 -45132949 + Tigger3(Golem) DNA MER2_type 2 98 -2931 1260 116 5 16 chr5 157952584 157952773 -45132759 + AluSx SINE Alu 1 187 -125 1294 98 0 34 chr5 157952773 157952977 -45132555 + Tigger3(Golem) DNA MER2_type 2210 2406 -623 3810 192 11 40 chr5 157952982 157953719 -45131813 - L1MB4 LINE L1 -24 6156 5447 2165 116 0 0 chr5 157953719 157954029 -45131503 - AluSx SINE Alu -2 310 1 3810 192 11 40 chr5 157954029 157954175 -45131357 - L1MB4 LINE L1 -733 5447 5298 3417 212 21 10 chr5 157954166 157955006 -45130526 - L1M3 LINE L1 -743 5403 4583 * 3416 210 33 24 chr5 157955597 157955810 -45129722 - L1M3 LINE L1 -1552 4594 4384 1544 161 6 71 chr5 157955810 157956008 -45129524 - AluJo SINE Alu -8 304 133 1759 148 3 26 chr5 157956008 157956312 -45129220 + AluSx SINE Alu 3 299 -13 1544 161 6 71 chr5 157956312 157956435 -45129097 - AluJo SINE Alu -179 133 4 3416 210 33 24 chr5 157956435 157956975 -45128557 - L1M3 LINE L1 -1762 4384 3829 3761 132 28 11 chr5 157956975 157957545 -45127987 - LTR19B LTR ERV1 0 580 1 3416 210 33 24 chr5 157957545 157957704 -45127828 - L1M3 LINE L1 -2317 3829 3673 224 263 94 84 chr5 157957893 157958106 -45127426 + L3 LINE CR1 1188 1402 -175 2435 49 0 0 chr5 157958274 157958578 -45126954 - AluY SINE Alu -7 304 1 555 281 146 33 chr5 157958829 157959048 -45126484 - L2 LINE L2 -1 3312 3055 2316 97 0 0 chr5 157959048 157959356 -45126176 + AluSc SINE Alu 1 308 -1 555 281 146 33 chr5 157959356 157959410 -45126122 - L2 LINE L2 -258 3055 3008 764 240 59 18 chr5 157959417 157959638 -45125894 + L2 LINE L2 1450 1679 -1635 617 233 61 39 chr5 157959639 157959819 -45125713 - FRAM SINE Alu 0 176 1 1557 80 0 5 chr5 157959824 157960059 -45125473 - AluY SINE Alu 0 311 80 498 279 214 45 chr5 157960167 157960522 -45125010 - L2 LINE L2 -23 3249 2835 290 206 215 37 chr5 157960546 157960680 -45124852 - MIR SINE MIR -63 145 30 2163 92 7 14 chr5 157962370 157962664 -45122868 - AluSx SINE Alu -15 297 6 487 294 55 30 chr5 157963491 157963692 -45121840 + MIR SINE MIR 57 262 0 2383 87 0 0 chr5 157965170 157965480 -45120052 - AluSx SINE Alu -2 310 1 198 304 0 0 chr5 157965763 157965809 -45119723 - L2 LINE L2 -13 3259 3214 267 293 66 9 chr5 157965959 157966065 -45119467 + MIR SINE MIR 116 227 -35 414 57 0 0 chr5 157967177 157967230 -45118302 + (TG)n Simple_repeat Simple_repeat 1 53 0 277 335 140 38 chr5 157967325 157967618 -45117914 + L2 LINE L2 2931 3253 -19 2234 84 3 0 chr5 157968010 157968306 -45117226 - AluSp SINE Alu -16 297 1 2078 121 6 19 chr5 157968369 157968684 -45116848 - AluSx SINE Alu -1 311 1 1716 138 11 0 chr5 157968741 157969002 -45116530 - AluSx SINE Alu -48 264 1 376 208 139 30 chr5 157969177 157969278 -45116254 + MER31B LTR ERV1 1 112 -354 585 213 0 0 chr5 157969333 157969441 -45116091 + MER31B LTR ERV1 320 427 -39 552 215 105 27 chr5 157969443 157969624 -45115908 - MER31B LTR ERV1 -298 168 1 247 233 33 0 chr5 157969625 157969685 -45115847 + MER113 DNA MER1_type? 458 519 -2 539 303 35 15 chr5 157969686 157969739 -45115793 - L1MC/D LINE L1 -480 5686 5636 2093 117 0 7 chr5 157969739 157970048 -45115484 - AluSq SINE Alu -6 307 1 539 303 35 15 chr5 157970048 157970330 -45115202 - L1MC/D LINE L1 -530 5636 5439 1941 119 45 0 chr5 157970339 157970625 -45114907 + AluSx SINE Alu 1 299 -13 829 105 30 53 chr5 157970625 157970758 -45114774 + AluSg SINE Alu 2 131 -179 218 255 20 0 chr5 157971054 157971105 -45114427 + MER5A DNA MER1_type 136 187 -2 526 315 74 28 chr5 157971467 157971683 -45113849 + MIR SINE MIR 28 253 -9 2243 64 20 3 chr5 157972453 157972750 -45112782 - AluY SINE Alu -9 302 1 2119 106 7 0 chr5 157972775 157973068 -45112464 - AluSq SINE Alu -16 297 3 569 318 36 106 chr5 157973354 157973656 -45111876 + L2 LINE L2 2989 3269 -3 1373 160 68 19 chr5 157973993 157974256 -45111276 - AluJb SINE Alu -10 302 27 336 346 112 19 chr5 157974406 157974611 -45110921 + MIR SINE MIR 12 235 -27 851 301 48 0 chr5 157974708 157974957 -45110575 + MIR SINE MIR 2 262 0 255 307 43 117 chr5 157975200 157975370 -45110162 + L2 LINE L2 2447 2597 -717 1813 137 29 0 chr5 157975370 157975647 -45109885 - AluSx SINE Alu -22 290 6 255 307 43 117 chr5 157975647 157975707 -45109825 + L2 LINE L2 2597 2660 -654 252 136 23 0 chr5 157975739 157975783 -45109749 - L1MB8 LINE L1 -13 6165 6121 1897 91 29 4 chr5 157975797 157976073 -45109459 - L1MA2 LINE L1 -4 6300 6018 235 353 30 53 chr5 157976074 157976096 -45109436 + L2 LINE L2 2694 2715 -599 1815 151 28 0 chr5 157976096 157976387 -45109145 + AluSx SINE Alu 1 299 -13 235 353 30 53 chr5 157976387 157976497 -45109035 + L2 LINE L2 2715 2823 -491 21 0 0 0 chr5 157977068 157977089 -45108443 + AT_rich Low_complexity Low_complexity 1 21 0 292 186 68 0 chr5 157977089 157977148 -45108384 - U7 snRNA snRNA 0 63 1 1981 124 0 19 chr5 157977156 157977471 -45108061 - AluSg SINE Alu -1 309 1 2219 99 3 6 chr5 157977474 157977787 -45107745 - AluSx SINE Alu 0 312 1 308 281 0 43 chr5 157978156 157978295 -45107237 + GA-rich Low_complexity Low_complexity 1 133 0 218 208 19 0 chr5 157979052 157979105 -45106427 + CT-rich Low_complexity Low_complexity 4 57 0 2132 130 0 0 chr5 157979456 157979764 -45105768 - AluSx SINE Alu -4 308 1 733 268 46 1 chr5 157980427 157980659 -45104873 + MIR SINE MIR 20 262 0 424 228 0 0 chr5 157982706 157982785 -45102747 + AluJ/FLAM SINE Alu 2 80 -232 624 154 39 10 chr5 157982801 157982905 -45102627 + FRAM SINE Alu 51 157 -19 1488 113 150 11 chr5 157982911 157983040 -45102492 + AluJb SINE Alu 1 111 -201 1988 87 35 3 chr5 157983040 157983327 -45102205 + AluSg SINE Alu 1 296 -14 1488 113 150 11 chr5 157983327 157983471 -45102061 + AluJb SINE Alu 111 312 0 2050 70 11 14 chr5 157984529 157984816 -45100716 - AluSg1 SINE Alu -21 288 3 976 117 99 94 chr5 157987245 157987458 -45098074 - AluJb SINE Alu -16 296 83 983 246 44 16 chr5 157987949 157988201 -45097331 + MIR SINE MIR 1 259 -3 220 280 229 17 chr5 157990222 157990340 -45095192 + MIR3 SINE MIR 9 151 -57 2308 85 0 3 chr5 157990399 157990706 -45094826 + AluSg SINE Alu 1 306 -4 2227 88 0 0 chr5 157991986 157992281 -45093251 - AluSc SINE Alu -14 295 1 23 0 0 0 chr5 157992375 157992398 -45093134 + AT_rich Low_complexity Low_complexity 1 23 0 2036 103 14 0 chr5 157992398 157992690 -45092842 + AluSq SINE Alu 1 296 -17 1858 136 36 105 chr5 157992995 157993219 -45092313 + MLT1B LTR MaLR 1 184 -206 1976 125 3 13 chr5 157993219 157993522 -45092010 + AluSx SINE Alu 1 300 -12 1858 136 36 105 chr5 157993522 157993716 -45091816 + MLT1B LTR MaLR 184 390 0 268 309 37 0 chr5 157993838 157993919 -45091613 - L2 LINE L2 -222 3091 3008 691 146 0 41 chr5 157993933 157994056 -45091476 + FLAM_C SINE Alu 1 118 -15 668 299 68 4 chr5 157994111 157994382 -45091150 - L2 LINE L2 -315 2998 2713 866 205 0 0 chr5 157994392 157994543 -45090989 - FAM SINE Alu -19 166 16 308 239 0 0 chr5 157994548 157994619 -45090913 + L1MC/D LINE L1 5701 5771 -2037 2106 115 10 3 chr5 157995389 157995684 -45089848 + AluSx SINE Alu 1 297 -15 1097 103 0 13 chr5 157995686 157995841 -45089691 + AluSg/x SINE Alu 142 294 -16 2372 72 7 3 chr5 157995847 157996153 -45089379 + AluY SINE Alu 1 307 -4 248 293 62 0 chr5 157996318 157996450 -45089082 - MIR SINE MIR -66 142 52 6095 162 76 63 chr5 157996502 157997034 -45088498 - Charlie1a DNA MER1_type -1316 1445 921 1479 125 37 64 chr5 157997034 157997279 -45088253 + L1MB4 LINE L1 5893 6130 -50 2375 92 0 3 chr5 157997279 157997574 -45087958 + AluSc SINE Alu 1 294 -15 1479 125 37 64 chr5 157997574 157997624 -45087908 + L1MB4 LINE L1 6130 6180 0 6095 162 76 63 chr5 157997624 157997771 -45087761 - Charlie1a DNA MER1_type -1840 921 777 2253 103 0 13 chr5 157997771 157998072 -45087460 - AluY SINE Alu -14 297 1 2237 119 3 0 chr5 157998074 157998376 -45087156 - AluSx SINE Alu -7 305 3 6095 162 76 63 chr5 157998376 157998440 -45087092 - Charlie1a DNA MER1_type -1984 777 715 2155 104 35 0 chr5 157998440 157998728 -45086804 - AluSp SINE Alu -11 302 5 6095 162 76 63 chr5 157998728 157999086 -45086446 - Charlie1a DNA MER1_type -2046 715 363 1520 139 31 96 chr5 157999086 157999409 -45086123 + AluSx SINE Alu 1 302 -10 6095 162 76 63 chr5 157999409 157999457 -45086075 - Charlie1a DNA MER1_type -2398 363 317 186 71 0 0 chr5 157999457 157999485 -45086047 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 6095 162 76 63 chr5 157999485 157999660 -45085872 - Charlie1a DNA MER1_type -2444 317 92 2153 102 0 3 chr5 157999660 157999986 -45085546 + AluSx SINE Alu 1 325 0 6095 162 76 63 chr5 157999986 158000037 -45085495 - Charlie1a DNA MER1_type -2669 92 43 1593 210 55 85 chr5 158000115 158000824 -45084708 - L1MC5 LINE L1 -48 7913 7226 1167 214 92 43 chr5 158001077 158001305 -45084227 + MER2 DNA MER2_type 2 252 -93 845 173 0 0 chr5 158001305 158001438 -45084094 - FLAM_C SINE Alu 0 133 1 1167 214 92 43 chr5 158001438 158001536 -45083996 + MER2 DNA MER2_type 252 344 -1 515 313 81 89 chr5 158001713 158002009 -45083523 + L2 LINE L2 2829 3121 -151 2227 101 10 0 chr5 158002009 158002306 -45083226 + AluSq SINE Alu 1 300 -13 515 313 81 89 chr5 158002306 158002456 -45083076 + L2 LINE L2 3121 3271 -1 376 284 57 0 chr5 158003693 158003834 -45081698 - MIR SINE MIR -14 248 100 630 226 102 0 chr5 158003907 158004084 -45081448 - MER46C DNA MER2_type -143 195 1 23 0 0 0 chr5 158004426 158004449 -45081083 + AT_rich Low_complexity Low_complexity 1 23 0 2335 88 3 0 chr5 158004451 158004745 -45080787 + AluSx SINE Alu 3 297 -15 2336 91 3 3 chr5 158004890 158005187 -45080345 + AluSg SINE Alu 1 297 -13 344 265 26 51 chr5 158006289 158006406 -45079126 - MER5A DNA MER1_type -12 177 64 918 101 8 0 chr5 158006423 158006542 -45078990 + AluSq SINE Alu 1 120 -193 1316 97 0 0 chr5 158006630 158006795 -45078737 + AluSq SINE Alu 129 293 -20 636 190 33 8 chr5 158006797 158006918 -45078614 - AluJo/FLAM SINE Alu -187 125 2 219 262 234 0 chr5 158007155 158007262 -45078270 - L2 LINE L2 0 3313 3182 198 0 0 0 chr5 158008667 158008689 -45076843 + (T)n Simple_repeat Simple_repeat 1 22 0 2032 88 103 0 chr5 158011325 158011597 -45073935 - AluSg SINE Alu -10 300 1 189 200 125 0 chr5 158012000 158012040 -45073492 + MIR3 SINE MIR 116 160 -48 193 321 18 80 chr5 158012845 158012957 -45072575 + MIR3 SINE MIR 81 185 -23 970 119 0 21 chr5 158014195 158014338 -45071194 + FLAM_C SINE Alu 1 140 -3 1639 201 95 66 chr5 158014788 158015071 -45070461 - MLT1F LTR MaLR 0 542 236 2355 86 26 0 chr5 158015071 158015375 -45070157 - AluSp SINE Alu -1 312 1 1639 201 95 66 chr5 158015375 158015618 -45069914 - MLT1F LTR MaLR -306 236 1 37 23 0 0 chr5 158016629 158016673 -45068859 + AT_rich Low_complexity Low_complexity 1 44 0 1843 139 83 3 chr5 158016680 158017018 -45068514 - MER47A DNA MER2_type 0 366 2 617 113 17 35 chr5 158017041 158017156 -45068376 - L1MC1 LINE L1 0 6333 6221 480 272 12 9 chr5 158017215 158017398 -45068134 + MIR SINE MIR 29 262 0 211 313 0 0 chr5 158017452 158017519 -45068013 + GA-rich Low_complexity Low_complexity 3 69 0 754 91 18 0 chr5 158018760 158018870 -45066662 - AluSx SINE Alu -2 308 197 1144 72 7 0 chr5 158018871 158019009 -45066523 - AluSx SINE Alu -174 139 1 717 171 73 141 chr5 158019039 158019273 -45066259 - MER20 DNA MER1_type 0 219 2 1987 122 30 7 chr5 158019920 158020223 -45065309 - AluSq SINE Alu -3 310 1 2130 76 17 28 chr5 158020509 158020799 -45064733 - AluY SINE Alu -24 287 1 292 241 46 19 chr5 158021177 158021285 -45064247 + L1MC4a LINE L1 5771 5881 -1927 225 196 0 0 chr5 158021354 158021400 -45064132 + L1ME4a LINE L1 5964 6009 -112 562 222 32 0 chr5 158021501 158021627 -45063905 + FLAM_C SINE Alu 1 130 -3 2081 128 0 6 chr5 158021634 158021946 -45063586 + AluSx SINE Alu 1 310 -2 2413 97 0 0 chr5 158021949 158022258 -45063274 + AluSc SINE Alu 1 309 0 812 58 9 2 chr5 158022274 158022499 -45063033 + AluSx SINE Alu 15 292 -20 466 222 0 59 chr5 158022505 158022640 -45062892 + FLAM_A SINE Alu 4 130 -3 698 125 18 0 chr5 158023292 158023404 -45062128 + L1MC3 LINE L1 6747 6860 -925 377 298 211 8 chr5 158023511 158023776 -45061756 - HAL1b LINE L1 -981 367 49 2468 87 3 0 chr5 158024213 158024524 -45061008 - AluSq SINE Alu -1 312 1 1444 160 53 14 chr5 158024654 158024821 -45060711 - AluJo SINE Alu -14 298 114 239 0 0 31 chr5 158024821 158024853 -45060679 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1444 160 53 14 chr5 158024853 158024967 -45060565 - AluJo SINE Alu -198 114 6 3808 183 78 86 chr5 158025469 158025540 -45059992 - L1MB3 LINE L1 -2 6181 6111 735 179 0 8 chr5 158025540 158025674 -45059858 - FLAM_C SINE Alu 0 133 1 3808 183 78 86 chr5 158025674 158025944 -45059588 - L1MB3 LINE L1 -72 6111 5840 2463 92 0 0 chr5 158025944 158026248 -45059284 - AluSx SINE Alu -8 304 1 3808 183 78 86 chr5 158026248 158026476 -45059056 - L1MB3 LINE L1 -343 5840 5612 2311 118 0 0 chr5 158026476 158026782 -45058750 - AluSg SINE Alu -4 306 1 3808 183 78 86 chr5 158026782 158027598 -45057934 - L1MB3 LINE L1 -571 5612 2426 2211 79 20 0 chr5 158027761 158028087 -45057445 + AluSp SINE Alu 3 313 0 203 0 37 0 chr5 158028169 158028196 -45057336 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 888 192 0 6 chr5 158028196 158028352 -45057180 - FAM SINE Alu -17 158 4 2124 110 0 10 chr5 158028400 158028690 -45056842 - AluSx SINE Alu -25 287 1 186 211 0 0 chr5 158029108 158029146 -45056386 - L2 LINE L2 -89 3224 3187 297 241 46 19 chr5 158029354 158029462 -45056070 + L1MD3 LINE L1 5771 5881 -1927 243 213 0 33 chr5 158029519 158029580 -45055952 + L1ME4a LINE L1 5951 6009 -112 1049 208 100 29 chr5 158029681 158029813 -45055719 + AluJo SINE Alu 1 122 -180 1857 154 0 7 chr5 158029813 158030147 -45055385 + AluSx SINE Alu 1 312 0 1049 208 100 29 chr5 158030147 158030293 -45055239 + AluJo SINE Alu 122 299 -3 509 160 30 10 chr5 158030889 158030989 -45054543 + L1MD3 LINE L1 6787 6888 -1107 2588 45 0 13 chr5 158030993 158031306 -45054226 + AluY SINE Alu 1 309 -2 2362 42 42 7 chr5 158031792 158032079 -45053453 + AluY SINE Alu 1 297 -14 1373 145 27 112 chr5 158032338 158032676 -45052856 - AluJo SINE Alu -3 309 1 4249 156 7 56 chr5 158033183 158033496 -45052036 - L1MB3 LINE L1 -3 6180 5853 267 31 0 0 chr5 158033496 158033528 -45052004 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1628 135 81 0 chr5 158033528 158033787 -45051745 - AluY SINE Alu -31 280 1 4249 156 7 56 chr5 158033787 158034207 -45051325 - L1MB3 LINE L1 -329 5854 5488 252 0 0 0 chr5 158034207 158034235 -45051297 + (TG)n Simple_repeat Simple_repeat 1 28 0 4249 156 7 56 chr5 158034235 158034318 -45051214 - L1MB3 LINE L1 -695 5488 5402 469 259 203 32 chr5 158034289 158034825 -45050707 - L1M4 LINE L1 -3093 3053 2426 * 290 284 94 16 chr5 158034855 158034982 -45050550 - L1ME3A LINE L1 -15 6155 6019 830 234 12 6 chr5 158035054 158035225 -45050307 - FAM SINE Alu -3 172 1 28 48 0 0 chr5 158035237 158035279 -45050253 + AT_rich Low_complexity Low_complexity 1 42 0 2054 132 0 0 chr5 158035279 158035566 -45049966 - AluSx SINE Alu -25 287 1 791 278 102 42 chr5 158035649 158036149 -45049383 - L1ME3A LINE L1 -214 5956 5427 2526 68 3 0 chr5 158036205 158036515 -45049017 - AluY SINE Alu 0 311 1 434 283 69 34 chr5 158036592 158036825 -45048707 - L1ME3A LINE L1 -21 6149 5909 636 125 0 0 chr5 158036854 158036942 -45048590 - 5S rRNA rRNA -33 88 1 264 169 77 0 chr5 158036945 158037010 -45048522 - L1ME3A LINE L1 -299 5871 5802 2361 87 3 16 chr5 158037149 158037460 -45048072 - AluSq SINE Alu -6 307 1 2032 215 63 23 chr5 158037721 158038020 -45047512 + L1MDa LINE L1 80 406 -6134 270 0 0 0 chr5 158038020 158038050 -45047482 + (CA)n Simple_repeat Simple_repeat 2 31 0 2032 215 63 23 chr5 158038050 158038225 -45047307 + L1MDa LINE L1 406 573 -5967 529 268 38 33 chr5 158038226 158038409 -45047123 + MER72 LTR ERV1 1 184 -538 1016 155 6 30 chr5 158038411 158038579 -45046953 - AluJo SINE Alu -143 169 6 1142 196 92 98 chr5 158038593 158039192 -45046340 + MER72-int LTR ERV1 2604 4574 -1757 879 143 0 0 chr5 158039862 158039981 -45045551 - FLAM_C SINE Alu -19 124 6 684 293 40 28 chr5 158040282 158040535 -45044997 + MER72-int LTR ERV1 6071 6326 -432 374 382 0 0 chr5 158040591 158040777 -45044755 + MER70-int LTR ERVL 4541 4726 -297 757 254 79 38 chr5 158040877 158041240 -45044292 + MER72-int LTR ERV1 6355 7079 -156 1139 277 66 75 chr5 158041263 158041956 -45043576 + MER72 LTR ERV1 1 687 -35 2952 181 71 36 chr5 158042005 158042715 -45042817 + L1MDa LINE L1 436 1479 -5061 464 191 161 12 chr5 158042708 158042870 -45042662 + L1MDa LINE L1 2305 2490 -4050 * 951 151 0 0 chr5 158042870 158043009 -45042523 + FLAM_C SINE Alu 1 139 -4 1429 118 54 0 chr5 158043198 158043401 -45042131 - AluSg/x SINE Alu -15 295 82 2160 121 3 0 chr5 158043499 158043797 -45041735 - AluSx SINE Alu -13 299 1 35 41 0 0 chr5 158043891 158043940 -45041592 + AT_rich Low_complexity Low_complexity 1 49 0 1648 105 4 4 chr5 158044203 158044441 -45041091 + L1PB1 LINE L1 5909 6146 -5 568 255 35 88 chr5 158044502 158045132 -45040400 - L1M4 LINE L1 -1978 4168 3578 1962 153 7 0 chr5 158045143 158045451 -45040081 - AluJo SINE Alu -2 310 1 364 236 58 17 chr5 158045456 158045630 -45039902 - HAL1 LINE L1 -333 2174 1994 1771 233 115 0 chr5 158046697 158047157 -45038375 - REP3 LTR ERV -49 513 1 1682 201 0 7 chr5 158047278 158047567 -45037965 - AluJb SINE Alu -23 289 3 224 59 29 0 chr5 158047927 158047961 -45037571 + (TA)n Simple_repeat Simple_repeat 1 35 0 314 145 14 43 chr5 158047975 158048044 -45037488 - L1MC4 LINE L1 -371 7671 7605 1664 119 23 0 chr5 158048107 158048368 -45037164 - L1MB2 LINE L1 -10 6161 5895 1843 119 0 0 chr5 158048368 158048619 -45036913 - AluSg SINE Alu -59 251 1 962 168 106 0 chr5 158048619 158048827 -45036705 - L1MB2 LINE L1 -556 5615 5386 3687 99 15 0 chr5 158048831 158049368 -45036164 - MER41B LTR ERV1 -90 545 1 2093 133 3 0 chr5 158049383 158049695 -45035837 - AluSq SINE Alu 0 313 1 5043 108 37 1 chr5 158049695 158050471 -45035061 - MER41B-int LTR ERV1 -5 5941 5138 2271 105 0 3 chr5 158050471 158050767 -45034765 - AluSg SINE Alu -15 295 1 2318 82 0 0 chr5 158050773 158051065 -45034467 - AluSg SINE Alu -18 292 1 2064 102 7 16 chr5 158051070 158051373 -45034159 - AluSg SINE Alu -10 300 1 1061 273 42 34 chr5 158051374 158051846 -45033686 - L1MC/D LINE L1 -1984 5824 5349 18369 174 42 17 chr5 158051901 158052543 -45032989 - L1PA13 LINE L1 -4 6810 6186 2129 124 6 13 chr5 158052543 158052857 -45032675 - AluJb SINE Alu 0 312 1 18369 174 42 17 chr5 158052857 158055281 -45030251 - L1PA13 LINE L1 -628 6186 3824 2106 145 7 0 chr5 158055281 158055584 -45029948 - AluSx SINE Alu -7 305 1 18369 174 42 17 chr5 158055584 158058934 -45026598 - L1PA13 LINE L1 -2990 3824 199 5496 203 19 19 chr5 158058934 158059036 -45026496 - L1 LINE L1 -2469 3677 3576 2480 74 0 0 chr5 158059036 158059345 -45026187 - AluY SINE Alu 0 311 3 5496 203 19 19 chr5 158059345 158059775 -45025757 - L1 LINE L1 -2570 3576 3147 1660 167 0 14 chr5 158059775 158060056 -45025476 - AluJb SINE Alu -25 287 11 5496 203 19 19 chr5 158060056 158060904 -45024628 - L1 LINE L1 -2998 3148 2296 500 88 0 0 chr5 158060905 158060973 -45024559 - Alu SINE Alu -9 302 235 1101 314 68 12 chr5 158061088 158061596 -45023936 - L2 LINE L2 -247 3066 2527 2147 259 77 43 chr5 158061881 158062908 -45022624 - L1MC4 LINE L1 -196 7846 6785 209 214 24 0 chr5 158062936 158062978 -45022554 + L2 LINE L2 3263 3305 -8 290 26 26 0 chr5 158063161 158063200 -45022332 + (CA)n Simple_repeat Simple_repeat 2 41 0 3655 59 4 0 chr5 158063273 158063296 -45022236 + L1P LINE L1 3926 3947 -2199 7749 48 0 0 chr5 158063296 158065024 -45020508 - L1PA5 LINE L1 -2 6152 4424 3655 59 4 0 chr5 158065024 158065492 -45020040 + L1PA5 LINE L1 3947 4419 -1727 2100 113 3 0 chr5 158065554 158065867 -45019665 + AluSq SINE Alu 1 314 0 1642 181 0 53 chr5 158066094 158066304 -45019228 - AluJo SINE Alu -21 291 100 2075 114 3 7 chr5 158066304 158066594 -45018938 - AluSc SINE Alu -16 293 5 1642 181 0 53 chr5 158066594 158066686 -45018846 - AluJo SINE Alu -212 100 5 548 202 0 0 chr5 158066688 158066782 -45018750 - AluJ/FLAM SINE Alu -218 94 1 1660 189 3 28 chr5 158066993 158067310 -45018222 - AluJb SINE Alu -3 309 1 1004 227 100 45 chr5 158067552 158067985 -45017547 + MLT1C LTR MaLR 12 467 0 1657 180 18 7 chr5 158068172 158068475 -45017057 + AluJo SINE Alu 1 306 0 5088 69 19 10 chr5 158119584 158120254 -44965278 + L1PA8 LINE L1 5497 6172 0 259 183 133 0 chr5 158120291 158120351 -44965181 + L1ME LINE L1 5567 5634 -532 1425 52 0 0 chr5 158120358 158120530 -44965002 + L1PA7 LINE L1 5982 6153 -1 192 152 0 0 chr5 158120553 158120586 -44964946 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2198 72 7 14 chr5 158122122 158122400 -44963132 + AluSp SINE Alu 1 276 -37 1506 182 3 46 chr5 158123183 158123296 -44962236 + AluJo SINE Alu 1 117 -195 393 39 0 0 chr5 158123296 158123347 -44962185 + (TC)n Simple_repeat Simple_repeat 2 52 0 243 0 0 0 chr5 158123346 158123373 -44962159 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 1506 182 3 46 chr5 158123347 158123373 -44962159 + AluJo SINE Alu 117 143 -169 2509 85 0 0 chr5 158123373 158123678 -44961854 - AluSq SINE Alu -8 305 1 1506 182 3 46 chr5 158123678 158123870 -44961662 + AluJo SINE Alu 143 294 -18 26 104 0 0 chr5 158123923 158124019 -44961513 + AT_rich Low_complexity Low_complexity 1 96 0 626 308 34 13 chr5 158124103 158124340 -44961192 - MIR SINE MIR -2 260 19 426 265 108 99 chr5 158125468 158125691 -44959841 + MIR SINE MIR 33 257 -5 414 247 44 32 chr5 158125694 158125824 -44959708 - MIR SINE MIR -62 146 48 2150 96 32 3 chr5 158126279 158126561 -44958971 - AluSg SINE Alu -20 290 1 576 141 74 7 chr5 158126680 158126815 -44958717 + L1PA7 LINE L1 6011 6154 0 30 27 0 0 chr5 158126815 158126852 -44958680 + AT_rich Low_complexity Low_complexity 1 37 0 1205 207 70 0 chr5 158126880 158127165 -44958367 + L1MD1 LINE L1 5937 6241 -1 292 256 40 30 chr5 158127186 158127385 -44958147 + L1M3 LINE L1 5254 5454 -717 276 333 67 12 chr5 158127467 158127707 -44957825 + L1ME LINE L1 5566 5818 -303 440 228 0 0 chr5 158130535 158130614 -44954918 + AluJ/FLAM SINE Alu 2 80 -232 637 154 39 10 chr5 158130630 158130734 -44954798 + FRAM SINE Alu 51 157 -19 1627 120 146 11 chr5 158130740 158130869 -44954663 + AluJb SINE Alu 1 111 -201 2267 80 28 3 chr5 158130869 158131158 -44954374 + AluSg SINE Alu 1 296 -14 1627 120 146 11 chr5 158131158 158131303 -44954229 + AluJb SINE Alu 111 312 0 181 265 0 88 chr5 158132128 158132196 -44953336 + L3 LINE CR1 1297 1358 -219 2208 77 7 11 chr5 158132362 158132649 -44952883 - AluSg1 SINE Alu -21 288 3 2011 100 4 0 chr5 158132726 158132987 -44952545 + AluSx SINE Alu 13 274 -38 2423 72 3 0 chr5 158133109 158133400 -44952132 + AluSq SINE Alu 1 292 -21 245 189 38 0 chr5 158133640 158133693 -44951839 + MER112 DNA MER1_type 2 56 -204 223 259 148 37 chr5 158133826 158133907 -44951625 + L2 LINE L2 3222 3311 -2 215 235 235 12 chr5 158133974 158134055 -44951477 + MIR SINE MIR 65 163 -99 1490 171 34 41 chr5 158136730 158137023 -44948509 - AluJb SINE Alu -21 291 1 1868 130 13 33 chr5 158137030 158137330 -44948202 - AluJb SINE Alu -18 294 1 2507 82 0 0 chr5 158137340 158137644 -44947888 - AluSq SINE Alu -9 304 1 198 285 114 57 chr5 158138812 158138970 -44946562 + MIR SINE MIR 31 197 -65 1081 118 99 90 chr5 158142404 158142616 -44942916 - AluJb SINE Alu -16 296 83 979 246 44 16 chr5 158143107 158143359 -44942173 + MIR SINE MIR 1 259 -3 217 290 199 23 chr5 158145373 158145542 -44939990 + MIR3 SINE MIR 7 151 -57 2458 85 0 3 chr5 158145557 158145864 -44939668 + AluSg SINE Alu 1 306 -4 2354 88 0 0 chr5 158147144 158147439 -44938093 - AluSc SINE Alu -14 295 1 23 0 0 0 chr5 158147533 158147556 -44937976 + AT_rich Low_complexity Low_complexity 1 23 0 2160 103 14 0 chr5 158147556 158147848 -44937684 + AluSq SINE Alu 1 296 -17 1863 136 36 105 chr5 158148153 158148377 -44937155 + MLT1B LTR MaLR 1 184 -206 2096 119 3 20 chr5 158148377 158148680 -44936852 + AluSx SINE Alu 1 298 -14 1863 136 36 105 chr5 158148680 158148874 -44936658 + MLT1B LTR MaLR 184 390 0 242 309 37 0 chr5 158148996 158149077 -44936455 - L2 LINE L2 -222 3091 3008 679 146 0 41 chr5 158149091 158149214 -44936318 + FLAM_C SINE Alu 1 118 -15 588 299 68 4 chr5 158149269 158149540 -44935992 - L2 LINE L2 -315 2998 2713 866 205 0 0 chr5 158149550 158149701 -44935831 - FAM SINE Alu -19 166 16 326 225 0 0 chr5 158149706 158149777 -44935755 + L1MC/D LINE L1 5701 5771 -2037 2106 115 10 3 chr5 158150544 158150839 -44934693 + AluSx SINE Alu 1 297 -15 1097 103 0 13 chr5 158150841 158150996 -44934536 + AluSg/x SINE Alu 142 294 -16 2372 72 7 3 chr5 158151002 158151308 -44934224 + AluY SINE Alu 1 307 -4 248 293 62 0 chr5 158151473 158151605 -44933927 - MIR SINE MIR -66 142 52 5899 161 72 79 chr5 158151657 158152190 -44933342 - Charlie1a DNA MER1_type -1316 1445 910 1479 125 37 64 chr5 158152190 158152435 -44933097 + L1MB4 LINE L1 5893 6130 -50 2411 88 0 3 chr5 158152435 158152731 -44932801 + AluSc SINE Alu 1 295 -14 1479 125 37 64 chr5 158152731 158152781 -44932751 + L1MB4 LINE L1 6130 6180 0 5899 161 72 79 chr5 158152781 158152928 -44932604 - Charlie1a DNA MER1_type -1851 910 763 2253 103 0 13 chr5 158152928 158153229 -44932303 - AluY SINE Alu -14 297 1 2237 119 3 0 chr5 158153231 158153533 -44931999 - AluSx SINE Alu -7 305 3 5899 161 72 79 chr5 158153533 158153597 -44931935 - Charlie1a DNA MER1_type -1999 762 699 2172 101 35 0 chr5 158153597 158153885 -44931647 - AluSp SINE Alu -11 302 5 5899 161 72 79 chr5 158153885 158154243 -44931289 - Charlie1a DNA MER1_type -2062 699 340 1536 139 31 96 chr5 158154243 158154566 -44930966 + AluSx SINE Alu 1 302 -10 5899 161 72 79 chr5 158154566 158154817 -44930715 - Charlie1a DNA MER1_type -2421 340 93 2153 102 0 3 chr5 158154817 158155128 -44930404 + AluSx SINE Alu 1 310 0 5899 161 72 79 chr5 158155128 158155179 -44930353 - Charlie1a DNA MER1_type -2668 93 43 1603 210 55 85 chr5 158155257 158155966 -44929566 - L1MC5 LINE L1 -48 7913 7226 1166 215 92 40 chr5 158156219 158156446 -44929086 + MER2 DNA MER2_type 2 253 -92 845 173 0 0 chr5 158156446 158156579 -44928953 - FLAM_C SINE Alu 0 133 1 1166 215 92 40 chr5 158156579 158156677 -44928855 + MER2 DNA MER2_type 253 344 -1 515 313 81 89 chr5 158156854 158157150 -44928382 + L2 LINE L2 2829 3121 -151 2221 104 10 0 chr5 158157150 158157448 -44928084 + AluSq SINE Alu 1 301 -12 515 313 81 89 chr5 158157448 158157598 -44927934 + L2 LINE L2 3121 3271 -1 376 284 57 0 chr5 158158836 158158977 -44926555 - MIR SINE MIR -14 248 100 616 232 102 0 chr5 158159050 158159227 -44926305 - MER46C DNA MER2_type -143 195 1 23 0 0 0 chr5 158159569 158159592 -44925940 + AT_rich Low_complexity Low_complexity 1 23 0 2321 92 3 0 chr5 158159594 158159888 -44925644 + AluSx SINE Alu 3 297 -15 2303 95 3 3 chr5 158160033 158160329 -44925203 + AluSg SINE Alu 1 296 -14 344 265 26 51 chr5 158161431 158161548 -44923984 - MER5A DNA MER1_type -12 177 64 918 101 8 0 chr5 158161565 158161684 -44923848 + AluSq SINE Alu 1 120 -193 1316 97 0 0 chr5 158161772 158161937 -44923595 + AluSq SINE Alu 129 293 -20 636 190 33 8 chr5 158161939 158162060 -44923472 - AluJo/FLAM SINE Alu -187 125 2 219 262 234 0 chr5 158162297 158162404 -44923128 - L2 LINE L2 0 3313 3182 207 0 0 0 chr5 158163818 158163841 -44921691 + (T)n Simple_repeat Simple_repeat 1 23 0 2032 88 103 0 chr5 158166474 158166746 -44918786 - AluSg SINE Alu -10 300 1 189 200 125 0 chr5 158167146 158167186 -44918346 + MIR3 SINE MIR 116 160 -48 193 321 18 80 chr5 158167991 158168103 -44917429 + MIR3 SINE MIR 81 185 -23 970 119 0 21 chr5 158169341 158169484 -44916048 + FLAM_C SINE Alu 1 140 -3 1639 201 95 66 chr5 158169934 158170217 -44915315 - MLT1F LTR MaLR 0 542 236 2382 79 26 0 chr5 158170217 158170521 -44915011 - AluSp SINE Alu -1 312 1 1639 201 95 66 chr5 158170521 158170764 -44914768 - MLT1F LTR MaLR -306 236 1 38 22 0 0 chr5 158171775 158171820 -44913712 + AT_rich Low_complexity Low_complexity 1 45 0 1843 139 83 3 chr5 158171827 158172165 -44913367 - MER47A DNA MER2_type 0 366 2 617 113 17 35 chr5 158172188 158172303 -44913229 - L1MC1 LINE L1 0 6333 6221 480 272 12 9 chr5 158172362 158172545 -44912987 + MIR SINE MIR 29 262 0 211 313 0 0 chr5 158172599 158172666 -44912866 + GA-rich Low_complexity Low_complexity 3 69 0 750 98 18 0 chr5 158173911 158174023 -44911509 - AluSx SINE Alu 0 310 197 1166 65 7 0 chr5 158174024 158174162 -44911370 - AluSx SINE Alu -174 139 1 713 162 73 141 chr5 158174192 158174426 -44911106 - MER20 DNA MER1_type 0 219 2 1987 122 30 7 chr5 158175071 158175374 -44910158 - AluSq SINE Alu -3 310 1 2124 76 17 31 chr5 158175660 158175951 -44909581 - AluY SINE Alu -24 287 1 292 241 46 19 chr5 158176329 158176437 -44909095 + L1MC4a LINE L1 5771 5881 -1927 225 196 0 0 chr5 158176506 158176552 -44908980 + L1ME4a LINE L1 5964 6009 -112 562 222 32 0 chr5 158176653 158176779 -44908753 + FLAM_C SINE Alu 1 130 -3 2081 128 0 6 chr5 158176786 158177098 -44908434 + AluSx SINE Alu 1 310 -2 2413 97 0 0 chr5 158177101 158177410 -44908122 + AluSc SINE Alu 1 309 0 812 58 9 7 chr5 158177424 158177650 -44907882 + AluSx SINE Alu 15 292 -20 466 222 0 59 chr5 158177656 158177791 -44907741 + FLAM_A SINE Alu 4 130 -3 712 116 18 0 chr5 158178443 158178555 -44906977 + L1MC3 LINE L1 6747 6860 -925 377 298 211 8 chr5 158178662 158178927 -44906605 - HAL1b LINE L1 -981 367 49 2480 87 3 0 chr5 158179364 158179676 -44905856 - AluSq SINE Alu 0 313 1 1444 160 53 14 chr5 158179806 158179973 -44905559 - AluJo SINE Alu -14 298 114 239 0 0 31 chr5 158179973 158180005 -44905527 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1444 160 53 14 chr5 158180005 158180119 -44905413 - AluJo SINE Alu -198 114 6 3795 184 77 85 chr5 158180621 158180692 -44904840 - L1MB3 LINE L1 -2 6181 6111 735 179 0 8 chr5 158180692 158180826 -44904706 - FLAM_C SINE Alu 0 133 1 3795 184 77 85 chr5 158180826 158181096 -44904436 - L1MB3 LINE L1 -72 6111 5840 2507 88 0 0 chr5 158181096 158181402 -44904130 - AluSx SINE Alu -6 306 1 3795 184 77 85 chr5 158181402 158181630 -44903902 - L1MB3 LINE L1 -343 5840 5612 2311 118 0 0 chr5 158181630 158181936 -44903596 - AluSg SINE Alu -4 306 1 3795 184 77 85 chr5 158181936 158182752 -44902780 - L1MB3 LINE L1 -571 5612 2426 2211 79 20 0 chr5 158182915 158183241 -44902291 + AluSp SINE Alu 3 313 0 203 0 37 0 chr5 158183323 158183350 -44902182 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 888 192 0 6 chr5 158183350 158183506 -44902026 - FAM SINE Alu -17 158 4 2124 110 0 10 chr5 158183554 158183844 -44901688 - AluSx SINE Alu -25 287 1 186 211 0 0 chr5 158184262 158184300 -44901232 - L2 LINE L2 -89 3224 3187 297 241 46 19 chr5 158184521 158184629 -44900903 + L1MD3 LINE L1 5771 5881 -1927 243 213 0 33 chr5 158184686 158184747 -44900785 + L1ME4a LINE L1 5951 6009 -112 1049 208 100 29 chr5 158184848 158184980 -44900552 + AluJo SINE Alu 1 122 -180 1857 154 0 7 chr5 158184980 158185314 -44900218 + AluSx SINE Alu 1 312 0 1049 208 100 29 chr5 158185314 158185460 -44900072 + AluJo SINE Alu 122 299 -3 509 160 30 10 chr5 158186056 158186156 -44899376 + L1MD3 LINE L1 6787 6888 -1107 2579 48 0 13 chr5 158186160 158186475 -44899057 + AluY SINE Alu 1 311 0 1359 148 27 112 chr5 158187508 158187846 -44897686 - AluJo SINE Alu -3 309 1 4198 157 5 60 chr5 158188353 158188667 -44896865 - L1MB3 LINE L1 -3 6180 5850 2329 88 3 0 chr5 158188667 158188963 -44896569 - AluSx SINE Alu -15 297 1 4198 157 5 60 chr5 158188963 158189387 -44896145 - L1MB3 LINE L1 -333 5850 5489 285 29 0 0 chr5 158189387 158189421 -44896111 + (TG)n Simple_repeat Simple_repeat 2 35 0 4198 157 5 60 chr5 158189421 158189505 -44896027 - L1MB3 LINE L1 -694 5489 5402 530 250 162 51 chr5 158189476 158190068 -44895464 - L1M4 LINE L1 -3093 3053 2396 * 913 216 0 6 chr5 158190271 158190447 -44895085 - FAM SINE Alu 0 175 1 2032 121 0 7 chr5 158190492 158190781 -44894751 - AluSx SINE Alu -25 287 1 2330 74 3 46 chr5 158190874 158191199 -44894333 - AluY SINE Alu 0 311 1 186 211 0 0 chr5 158191523 158191561 -44893971 - L2 LINE L2 -89 3224 3187 310 231 46 19 chr5 158191782 158191890 -44893642 + L1MC3 LINE L1 5771 5881 -1927 955 178 109 82 chr5 158192109 158192254 -44893278 + AluJo SINE Alu 1 141 -161 2055 125 0 7 chr5 158192254 158192551 -44892981 + AluSx SINE Alu 1 295 -17 955 178 109 82 chr5 158192551 158192698 -44892834 + AluJo SINE Alu 141 301 -1 692 146 16 16 chr5 158193280 158193403 -44892129 + L1MC3 LINE L1 6737 6859 -926 2182 121 0 0 chr5 158193750 158194040 -44891492 - AluSg SINE Alu -20 290 1 213 240 0 0 chr5 158194156 158194206 -44891326 + T-rich Low_complexity Low_complexity 1 50 0 1630 156 20 13 chr5 158194599 158194778 -44890754 - AluJb SINE Alu -9 303 120 189 0 0 0 chr5 158194778 158194799 -44890733 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1630 156 20 13 chr5 158194799 158194920 -44890612 - AluJb SINE Alu -192 120 1 4249 156 7 56 chr5 158195429 158195742 -44889790 - L1MB3 LINE L1 -3 6180 5853 267 31 0 0 chr5 158195742 158195774 -44889758 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1628 135 81 0 chr5 158195774 158196033 -44889499 - AluY SINE Alu -31 280 1 4249 156 7 56 chr5 158196033 158196453 -44889079 - L1MB3 LINE L1 -329 5854 5488 342 0 0 0 chr5 158196453 158196491 -44889041 + (TG)n Simple_repeat Simple_repeat 1 38 0 4249 156 7 56 chr5 158196491 158196574 -44888958 - L1MB3 LINE L1 -695 5488 5402 471 259 203 32 chr5 158196545 158197081 -44888451 - L1M4 LINE L1 -3093 3053 2426 * 290 281 118 33 chr5 158197111 158197264 -44888268 - L1ME3A LINE L1 -15 6155 5990 329 203 0 14 chr5 158197303 158197377 -44888155 - FAM SINE Alu 0 179 107 826 234 12 6 chr5 158197310 158197481 -44888051 - FAM SINE Alu -3 172 1 28 48 0 0 chr5 158197493 158197535 -44887997 + AT_rich Low_complexity Low_complexity 1 42 0 2044 132 0 0 chr5 158197535 158197822 -44887710 - AluSx SINE Alu -25 287 1 627 283 102 42 chr5 158197905 158198403 -44887129 - L1ME3A LINE L1 -214 5956 5429 2506 65 3 0 chr5 158198464 158198772 -44886760 - AluY SINE Alu -2 309 1 374 283 69 34 chr5 158198849 158199082 -44886450 - L1ME3A LINE L1 -21 6149 5909 592 125 0 0 chr5 158199111 158199199 -44886333 - 5S rRNA rRNA -33 88 1 239 169 77 0 chr5 158199202 158199267 -44886265 - L1ME3A LINE L1 -299 5871 5802 2355 87 3 16 chr5 158199406 158199718 -44885814 - AluSq SINE Alu -5 308 1 1818 222 63 23 chr5 158199979 158200278 -44885254 + L1MDa LINE L1 80 406 -6134 378 0 0 0 chr5 158200278 158200320 -44885212 + (CA)n Simple_repeat Simple_repeat 2 43 0 1818 222 63 23 chr5 158200320 158200493 -44885039 + L1MDa LINE L1 406 571 -5969 469 264 35 35 chr5 158200496 158200670 -44884862 + MER72 LTR ERV1 1 174 -548 1023 155 6 30 chr5 158200681 158200849 -44884683 - AluJo SINE Alu -143 169 6 963 203 89 95 chr5 158200865 158201460 -44884072 + MER72-int LTR ERV1 2606 4572 -1759 883 143 0 0 chr5 158202132 158202251 -44883281 - FLAM_C SINE Alu -19 124 6 596 309 12 25 chr5 158202562 158202805 -44882727 + MER72-int LTR ERV1 6087 6326 -432 308 387 0 0 chr5 158202861 158203047 -44882485 + MER70-int LTR ERVL 4541 4726 -297 676 251 85 26 chr5 158203194 158203510 -44882022 + MER72-int LTR ERV1 6399 7079 -156 953 276 66 75 chr5 158203533 158204226 -44881306 + MER72 LTR ERV1 1 687 -35 2714 181 71 36 chr5 158204275 158204985 -44880547 + L1MDa LINE L1 436 1479 -5061 388 202 155 12 chr5 158204970 158205138 -44880394 + L1MDa LINE L1 2297 2488 -4052 * 945 158 0 0 chr5 158205140 158205279 -44880253 + FLAM_C SINE Alu 1 139 -4 1441 118 54 0 chr5 158205468 158205672 -44879860 - AluSg/x SINE Alu -14 296 82 2135 124 3 0 chr5 158205770 158206068 -44879464 - AluSx SINE Alu -13 299 1 35 41 0 0 chr5 158206162 158206211 -44879321 + AT_rich Low_complexity Low_complexity 1 49 0 1613 105 4 4 chr5 158206470 158206708 -44878824 + L1PB1 LINE L1 5909 6146 -5 541 255 35 89 chr5 158206769 158207388 -44878144 - L1P LINE L1 -1978 4168 3589 1996 149 7 0 chr5 158207410 158207718 -44877814 - AluJo SINE Alu -2 310 1 364 236 58 17 chr5 158207723 158207897 -44877635 - HAL1 LINE L1 -333 2174 1994 1771 233 115 0 chr5 158208964 158209424 -44876108 - REP3 LTR ERV -49 513 1 1682 201 0 7 chr5 158209545 158209834 -44875698 - AluJb SINE Alu -23 289 3 191 88 29 0 chr5 158210195 158210229 -44875303 + (TA)n Simple_repeat Simple_repeat 1 35 0 314 145 14 43 chr5 158210243 158210312 -44875220 - L1MC4 LINE L1 -371 7671 7605 1664 119 23 0 chr5 158210375 158210636 -44874896 - L1MB2 LINE L1 -10 6161 5895 1806 128 0 0 chr5 158210636 158210887 -44874645 - AluSg SINE Alu -59 251 1 947 173 106 0 chr5 158210887 158211095 -44874437 - L1MB2 LINE L1 -556 5615 5386 3687 99 15 0 chr5 158211099 158211636 -44873896 - MER41B LTR ERV1 -90 545 1 2093 133 3 0 chr5 158211651 158211963 -44873569 - AluSq SINE Alu 0 313 1 5052 106 37 3 chr5 158211963 158212740 -44872792 - MER41B-int LTR ERV1 -5 5941 5138 2261 105 0 3 chr5 158212740 158213035 -44872497 - AluSg SINE Alu -16 294 1 2293 92 0 0 chr5 158213041 158213334 -44872198 - AluSg SINE Alu -17 293 1 2064 102 7 16 chr5 158213339 158213642 -44871890 - AluSg SINE Alu -10 300 1 1061 273 42 34 chr5 158213643 158214115 -44871417 - L1MC/D LINE L1 -1984 5824 5349 18468 173 41 17 chr5 158214170 158214819 -44870713 - L1PA13 LINE L1 -4 6810 6178 2131 120 7 13 chr5 158214819 158215127 -44870405 - AluJb SINE Alu -6 306 1 18468 173 41 17 chr5 158215127 158217550 -44867982 - L1PA13 LINE L1 -636 6178 3814 2106 145 7 0 chr5 158217550 158217853 -44867679 - AluSx SINE Alu -7 305 1 18468 173 41 17 chr5 158217853 158221204 -44864328 - L1PA13 LINE L1 -3000 3814 199 5415 203 19 29 chr5 158221203 158221319 -44864213 - L1 LINE L1 -2470 3676 3560 * 2521 68 0 0 chr5 158221319 158221628 -44863904 - AluY SINE Alu 0 311 3 5415 203 19 29 chr5 158221628 158222058 -44863474 - L1 LINE L1 -2586 3560 3127 1665 167 0 18 chr5 158222058 158222340 -44863192 - AluJb SINE Alu -25 287 11 5415 203 19 29 chr5 158222340 158223188 -44862344 - L1 LINE L1 -3019 3127 2296 510 86 0 0 chr5 158223189 158223259 -44862273 - Alu SINE Alu -7 302 233 1112 311 68 12 chr5 158223374 158223882 -44861650 - L2 LINE L2 -247 3066 2527 2104 260 77 43 chr5 158224167 158225194 -44860338 - L1MC4 LINE L1 -196 7846 6785 209 214 24 0 chr5 158225222 158225264 -44860268 + L2 LINE L2 3263 3305 -8 308 24 24 0 chr5 158225447 158225488 -44860044 + (CA)n Simple_repeat Simple_repeat 2 43 0 3629 61 4 0 chr5 158225561 158225584 -44859948 + L1P LINE L1 3926 3947 -2199 7714 49 0 0 chr5 158225584 158227312 -44858220 - L1PA5 LINE L1 -2 6152 4424 3629 61 4 0 chr5 158227312 158227780 -44857752 + L1PA5 LINE L1 3947 4419 -1727 2124 106 3 0 chr5 158227842 158228155 -44857377 + AluSq SINE Alu 1 314 0 387 302 49 72 chr5 158228159 158228382 -44857150 - L1M4 LINE L1 -1526 5118 4908 1684 179 0 52 chr5 158228382 158228592 -44856940 - AluJo SINE Alu -21 291 100 2075 114 3 7 chr5 158228592 158228882 -44856650 - AluSc SINE Alu -16 293 5 1684 179 0 52 chr5 158228882 158228978 -44856554 - AluJo SINE Alu -212 100 1 387 302 49 72 chr5 158228978 158229184 -44856348 - L1M4 LINE L1 -1736 4908 4699 1660 189 3 28 chr5 158229189 158229506 -44856026 - AluJb SINE Alu -3 309 1 247 360 7 14 chr5 158229508 158229655 -44855877 - L1M4 LINE L1 -1986 4658 4513 1033 222 100 45 chr5 158229748 158230181 -44855351 + MLT1C LTR MaLR 12 467 0 1657 180 18 7 chr5 158230368 158230671 -44854861 + AluJo SINE Alu 1 306 0 228 185 0 19 chr5 158231926 158231980 -44853552 + (TA)n Simple_repeat Simple_repeat 2 54 0 4986 224 67 44 chr5 158232002 158232387 -44853145 - L1M4 LINE L1 -3301 3343 2969 207 0 0 0 chr5 158232387 158232410 -44853122 + (TA)n Simple_repeat Simple_repeat 2 24 0 4986 224 67 44 chr5 158232410 158232929 -44852603 - L1M4 LINE L1 -3675 2969 2464 1905 180 0 0 chr5 158232929 158233218 -44852314 + AluSx SINE Alu 1 289 -23 4986 224 67 44 chr5 158233218 158233420 -44852112 - L1M4 LINE L1 -4180 2464 2268 1871 166 155 11 chr5 158233420 158233794 -44851738 - MSTA LTR MaLR 0 428 1 4986 224 67 44 chr5 158233794 158233992 -44851540 - L1M4 LINE L1 -4376 2268 2076 2261 74 3 23 chr5 158233992 158234291 -44851241 - AluY SINE Alu -18 293 1 4986 224 67 44 chr5 158234291 158234869 -44850663 - L1M4 LINE L1 -4568 2076 1513 769 164 0 39 chr5 158234869 158234997 -44850535 - FLAM_C SINE Alu -9 124 2 4986 224 67 44 chr5 158234997 158235569 -44849963 - L1M4 LINE L1 -5131 1513 817 297 239 17 60 chr5 158235663 158235780 -44849752 - L1M4 LINE L1 -5733 913 802 1386 209 62 40 chr5 158235908 158236330 -44849202 - MSTB1 LTR MaLR 0 432 2 715 158 55 0 chr5 158236606 158236733 -44848799 - AluJo SINE Alu -178 134 1 4601 226 37 31 chr5 158236902 158236920 -44848612 - L1MD1 LINE L1 -1 6635 6619 1786 204 23 37 chr5 158236920 158237166 -44848366 + MSTB LTR MaLR 1 240 -186 2222 104 0 10 chr5 158237166 158237465 -44848067 - AluSg SINE Alu -14 296 1 1786 204 23 37 chr5 158237465 158237650 -44847882 + MSTB LTR MaLR 240 426 0 4601 226 37 31 chr5 158237650 158240256 -44845276 - L1MD1 LINE L1 -17 6619 4002 611 89 10 0 chr5 158240277 158240378 -44845154 - HSMAR2 DNA Mariner -3 1299 1198 195 42 0 0 chr5 158240382 158240406 -44845126 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 11377 96 6 2 chr5 158240406 158242894 -44842638 - L1PA10 LINE L1 -21 6462 3962 2390 207 37 40 chr5 158242894 158243748 -44841784 - L1PA10 LINE L1 -5009 1452 10 6618 133 38 34 chr5 158243748 158243938 -44841594 - HSMAR2 DNA Mariner -83 1219 1031 2121 139 3 0 chr5 158243938 158244247 -44841285 + AluSx SINE Alu 1 310 -2 6618 133 38 34 chr5 158244247 158245270 -44840262 - HSMAR2 DNA Mariner -271 1031 1 26 0 0 0 chr5 158245298 158245324 -44840208 + AT_rich Low_complexity Low_complexity 1 26 0 1419 213 37 85 chr5 158245341 158245628 -44839904 - L1MD1 LINE L1 -3221 3319 3072 2262 106 0 23 chr5 158245628 158245929 -44839603 - AluSx SINE Alu -18 294 1 1419 213 37 85 chr5 158245929 158246215 -44839317 - L1MD1 LINE L1 -3468 3072 2774 2060 134 0 3 chr5 158246220 158246512 -44839020 - AluSx SINE Alu -21 291 1 1833 105 15 73 chr5 158246586 158246928 -44838604 + HSMAR2 DNA Mariner 499 820 -482 294 211 44 0 chr5 158246934 158247024 -44838508 - L1MD1 LINE L1 -3997 2724 2631 2650 207 88 65 chr5 158247037 158247055 -44838477 - L1MD1 LINE L1 -4785 1755 1739 1871 204 0 3 chr5 158247055 158247368 -44838164 - AluJb SINE Alu 0 312 1 2650 207 88 65 chr5 158247368 158247662 -44837870 - L1MD1 LINE L1 -4801 1739 1453 877 230 0 0 chr5 158247662 158247823 -44837709 - FRAM SINE Alu -5 161 1 2650 207 88 65 chr5 158247823 158248489 -44837043 - L1MD1 LINE L1 -5087 1453 803 2545 193 17 2 chr5 158248489 158248909 -44836623 + MSTB LTR MaLR 1 426 0 9561 178 14 23 chr5 158248909 158249281 -44836251 + MSTB-int LTR MaLR 1 375 -1276 2329 86 6 25 chr5 158249281 158249596 -44835936 - AluY SINE Alu -2 309 1 9561 178 14 23 chr5 158249596 158250888 -44834644 + MSTB-int LTR MaLR 375 1651 0 2393 165 44 12 chr5 158250888 158251301 -44834231 + MSTB LTR MaLR 1 426 0 2650 207 88 65 chr5 158251301 158251759 -44833773 - L1MD1 LINE L1 -5736 804 172 26 0 0 0 chr5 158252790 158252816 -44832716 + AT_rich Low_complexity Low_complexity 1 26 0 314 282 101 105 chr5 158254480 158255073 -44830459 - L1M2 LINE L1 -5751 1098 508 2110 113 7 7 chr5 158256140 158256442 -44829090 + AluSx SINE Alu 1 302 -10 308 301 32 64 chr5 158256632 158256788 -44828744 - MIR SINE MIR -10 252 102 346 306 82 8 chr5 158258170 158258304 -44827228 + MLT1I LTR MaLR 63 206 -203 1103 220 38 103 chr5 158258932 158259359 -44826173 - MLT1C LTR MaLR 0 467 69 786 309 77 53 chr5 158259900 158260369 -44825163 + MLT1K LTR MaLR 79 558 -30 1490 145 0 0 chr5 158260988 158261209 -44824323 + L1MB2 LINE L1 5644 5864 -307 2469 132 36 26 chr5 158261210 158261627 -44823905 + L1MB2 LINE L1 5749 6169 -2 320 289 90 111 chr5 158263180 158263723 -44821809 - L1M2 LINE L1 -5789 1060 529 1998 104 9 61 chr5 158264818 158265144 -44820388 - AluSx SINE Alu -3 309 1 296 263 131 22 chr5 158267613 158267750 -44817782 + MIR SINE MIR 100 251 -11 415 289 101 89 chr5 158269413 158270227 -44815305 - L1M2 LINE L1 -5478 1371 522 1207 266 83 41 chr5 158276940 158277648 -44807884 - L1ME3A LINE L1 -143 6027 5290 296 209 291 24 chr5 158277763 158277973 -44807559 - L1ME3A LINE L1 -937 5209 4944 7687 43 0 0 chr5 158277987 158278953 -44806579 - L1PA6 LINE L1 -8 6146 5174 3278 212 65 62 chr5 158278980 158279597 -44805935 - L1M3d LINE L1 -2497 5068 4445 509 231 30 37 chr5 158279597 158279731 -44805801 - FLAM_C SINE Alu 0 133 1 3278 212 65 62 chr5 158279731 158280226 -44805306 - L1M3d LINE L1 -3120 4445 3953 6701 128 27 68 chr5 158280234 158280686 -44804846 - Tigger3b DNA MER2_type -1819 1209 740 1880 150 3 11 chr5 158280686 158280972 -44804560 + AluJo SINE Alu 1 284 -28 6701 128 27 68 chr5 158280972 158281778 -44803754 - Tigger3b DNA MER2_type -2288 740 2 1799 261 52 35 chr5 158281778 158282984 -44802548 - L1 LINE L1 -3613 3952 2720 2663 241 75 111 chr5 158282989 158283473 -44802059 - L1M3d LINE L1 -4521 2965 2465 264 30 0 0 chr5 158283473 158283506 -44802026 + (TG)n Simple_repeat Simple_repeat 1 33 0 2663 241 75 111 chr5 158283506 158284441 -44801091 - L1M3d LINE L1 -5021 2465 1597 539 312 91 16 chr5 158284673 158285388 -44800144 - L1M4c LINE L1 -4617 2412 1495 1508 193 36 4 chr5 158285527 158285801 -44799731 + AluJo SINE Alu 1 283 -29 360 299 92 84 chr5 158289962 158290641 -44794891 - L1M4c LINE L1 -5478 1371 508 24 0 0 0 chr5 158291309 158291333 -44794199 + AT_rich Low_complexity Low_complexity 1 24 0 1299 184 78 58 chr5 158291437 158291731 -44793801 - AluJo SINE Alu -2 300 1 26 0 0 0 chr5 158291783 158291809 -44793723 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 158291910 158291948 -44793584 + AT_rich Low_complexity Low_complexity 1 38 0 309 328 16 16 chr5 158292124 158292246 -44793286 - L1MC4a LINE L1 -1919 5889 5768 213 82 109 0 chr5 158292311 158292421 -44793111 + (TA)n Simple_repeat Simple_repeat 2 123 0 1707 128 83 4 chr5 158292427 158292693 -44792839 - AluSp SINE Alu -26 287 1 364 288 98 97 chr5 158296280 158296849 -44788683 - L1 LINE L1 -5751 1815 1246 26 0 0 0 chr5 158297482 158297508 -44788024 + AT_rich Low_complexity Low_complexity 1 26 0 27 62 0 0 chr5 158297539 158297587 -44787945 + AT_rich Low_complexity Low_complexity 1 48 0 1543 189 21 32 chr5 158298348 158298633 -44786899 - AluJb SINE Alu -19 283 2 440 325 91 17 chr5 158298659 158298890 -44786642 + MIR SINE MIR 2 249 -13 320 301 181 73 chr5 158302571 158303135 -44782397 - L1M2 LINE L1 -5687 1162 538 21 0 0 0 chr5 158304563 158304584 -44780948 + AT_rich Low_complexity Low_complexity 1 21 0 276 100 0 0 chr5 158304587 158304627 -44780905 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 1494 213 3 19 chr5 158304636 158304950 -44780582 - AluJo SINE Alu -3 309 1 468 0 0 0 chr5 158305049 158305101 -44780431 + (TG)n Simple_repeat Simple_repeat 2 53 0 1615 166 0 35 chr5 158305103 158305393 -44780139 - AluSx SINE Alu -32 280 1 311 250 62 55 chr5 158305418 158305546 -44779986 - L1ME4a LINE L1 -249 5872 5744 1297 225 89 8 chr5 158305627 158305927 -44779605 + AluJb SINE Alu 5 325 0 1536 147 0 0 chr5 158306369 158306587 -44778945 - AluJb SINE Alu -25 287 70 352 297 86 96 chr5 158309531 158310184 -44775348 - L1M2 LINE L1 -5478 1371 508 186 370 81 21 chr5 158312561 158312796 -44772736 + MIR SINE MIR 12 260 -2 2433 84 0 3 chr5 158313327 158313638 -44771894 - AluSg SINE Alu 0 310 1 340 272 147 64 chr5 158316891 158317266 -44768266 - L1M2 LINE L1 -5439 1410 1005 27 0 0 0 chr5 158317869 158317896 -44767636 + AT_rich Low_complexity Low_complexity 1 27 0 29 28 0 0 chr5 158319161 158319197 -44766335 + AT_rich Low_complexity Low_complexity 1 36 0 2154 125 0 0 chr5 158319238 158319535 -44765997 - AluSg SINE Alu -8 302 6 2365 65 0 3 chr5 158319851 158320144 -44765388 - AluY SINE Alu -19 292 1 404 258 25 17 chr5 158320528 158320648 -44764884 + MER94 DNA DNA 14 134 0 264 292 118 28 chr5 158320666 158320810 -44764722 + MER5A DNA MER1_type 30 186 -3 1536 171 45 18 chr5 158320859 158321145 -44764387 + AluJb SINE Alu 9 302 -10 350 335 110 5 chr5 158322174 158322365 -44763167 - MIR SINE MIR -12 250 40 384 259 183 88 chr5 158324230 158324809 -44760723 - L1M2 LINE L1 -5687 1162 529 24 0 0 0 chr5 158326483 158326507 -44759025 + AT_rich Low_complexity Low_complexity 1 24 0 765 170 0 0 chr5 158326976 158327088 -44758444 + FLAM_C SINE Alu 2 113 -30 340 152 0 43 chr5 158327102 158327194 -44758338 + (TA)n Simple_repeat Simple_repeat 1 88 0 917 160 0 63 chr5 158327194 158327369 -44758163 + AluJb SINE Alu 136 299 -13 2410 60 26 0 chr5 158327695 158327997 -44757535 - AluY SINE Alu -1 310 1 387 288 95 98 chr5 158329624 158330243 -44755289 - L1M2 LINE L1 -5446 1403 787 2080 121 0 20 chr5 158330684 158330982 -44754550 + AluSx SINE Alu 1 292 -20 830 106 0 16 chr5 158331892 158332015 -44753517 + FLAM_C SINE Alu 6 126 -17 279 297 88 56 chr5 158332546 158332795 -44752737 - MIR SINE MIR -1 261 5 35 24 0 0 chr5 158335041 158335083 -44750449 + AT_rich Low_complexity Low_complexity 1 42 0 321 291 102 104 chr5 158337289 158337867 -44747665 - L1M2 LINE L1 -5751 1098 522 684 227 107 0 chr5 158338910 158339060 -44746472 - FAM SINE Alu -14 171 6 1435 188 0 0 chr5 158339317 158339556 -44745976 + AluJo SINE Alu 2 240 -72 22 0 0 0 chr5 158340198 158340220 -44745312 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 158340375 158340404 -44745128 + AT_rich Low_complexity Low_complexity 1 29 0 2206 122 0 0 chr5 158340637 158340932 -44744600 - AluSx SINE Alu -17 295 1 391 287 95 97 chr5 158343661 158344239 -44741293 - L1M2 LINE L1 -5751 1098 522 308 203 0 0 chr5 158345140 158345199 -44740333 - L1MC4 LINE L1 -13 8029 7971 697 184 8 40 chr5 158345762 158345887 -44739645 - FLAM_A SINE Alu -12 121 1 21 0 0 0 chr5 158345894 158345915 -44739617 + AT_rich Low_complexity Low_complexity 1 21 0 398 365 91 29 chr5 158346073 158346591 -44738941 - L2 LINE L2 -630 2684 2135 1458 235 138 33 chr5 158346606 158347057 -44738475 - MLT1D LTR MaLR -7 498 1 430 292 174 71 chr5 158350456 158351058 -44734474 - L1M2 LINE L1 -5687 1162 499 242 333 67 12 chr5 158352370 158352610 -44732922 - L1ME LINE L1 -303 5818 5566 304 256 40 30 chr5 158352692 158352891 -44732641 - L1M3 LINE L1 -717 5454 5254 1228 203 66 0 chr5 158352912 158353198 -44732334 - L1MD1 LINE L1 -1 6241 5937 29 28 0 0 chr5 158353226 158353262 -44732270 + AT_rich Low_complexity Low_complexity 1 36 0 452 130 56 56 chr5 158353262 158353370 -44732162 - L1PA10 LINE L1 -1 6167 6060 2396 95 0 3 chr5 158353517 158353823 -44731709 + AluSg SINE Alu 1 305 -5 329 280 13 0 chr5 158353861 158353936 -44731596 - L2 LINE L2 -4 3309 3234 1697 252 102 24 chr5 158353944 158354065 -44731467 - L1MEc LINE L1 -4625 1771 1661 2485 63 0 0 chr5 158354065 158354367 -44731165 - AluY SINE Alu -9 302 1 1697 252 102 24 chr5 158354367 158355180 -44730352 - L1MEc LINE L1 -4735 1661 764 180 111 0 0 chr5 158355182 158355209 -44730323 + (TG)n Simple_repeat Simple_repeat 2 28 0 767 167 41 147 chr5 158355219 158355464 -44730068 + MER20 DNA MER1_type 1 219 0 826 286 4 8 chr5 158355464 158355719 -44729813 - L1MEc LINE L1 -5645 751 498 368 196 20 39 chr5 158355746 158355848 -44729684 + AluJb SINE Alu 193 292 -10 398 281 100 55 chr5 158355859 158356528 -44729004 - L1MEc LINE L1 -2201 4014 3316 22 0 0 0 chr5 158356560 158356582 -44728950 + AT_rich Low_complexity Low_complexity 1 22 0 610 275 86 33 chr5 158356673 158357005 -44728527 + MLT1H1 LTR MaLR 20 385 -205 1131 185 0 37 chr5 158357007 158357223 -44728309 - MER63A DNA MER1_type -2 208 1 241 229 0 16 chr5 158357281 158357342 -44728190 + MLT1H1 LTR MaLR 496 555 0 674 321 85 24 chr5 158357356 158358228 -44727304 - L1MEc LINE L1 -4095 2301 1357 1065 139 5 21 chr5 158358228 158358415 -44727117 - L1PB1 LINE L1 -2 6149 5966 674 321 85 24 chr5 158358415 158358549 -44726983 - L1MEc LINE L1 -5039 1357 1233 1010 201 122 58 chr5 158358659 158359002 -44726530 + MLT1A1 LTR MaLR 1 365 0 379 358 57 25 chr5 158359108 158359390 -44726142 - L1MEc LINE L1 -5298 907 617 4349 143 20 17 chr5 158359576 158360340 -44725192 - L1MA5 LINE L1 0 6300 5535 867 118 0 8 chr5 158360351 158360478 -44725054 + FLAM_C SINE Alu 10 135 -8 1547 159 20 17 chr5 158360479 158360774 -44724758 - L1M2 LINE L1 -4234 2615 2320 250 135 0 0 chr5 158360774 158360811 -44724721 - tRNA-Leu-TTG tRNA tRNA -48 38 2 21 36 0 0 chr5 158361412 158361440 -44724092 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 158361921 158361942 -44723590 + AT_rich Low_complexity Low_complexity 1 21 0 930 188 10 0 chr5 158362401 158362609 -44722923 - L1M4 LINE L1 -749 5397 5188 2878 110 27 29 chr5 158362610 158362771 -44722761 - L1PA15 LINE L1 -227 5938 5778 195 42 0 0 chr5 158362771 158362795 -44722737 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 2172 94 3 0 chr5 158362795 158363082 -44722450 - AluSq SINE Alu -25 288 1 2878 110 27 29 chr5 158363082 158363408 -44722124 - L1PA15 LINE L1 -385 5780 5451 1449 133 0 58 chr5 158363408 158363648 -44721884 - AluSx SINE Alu -86 226 1 764 159 0 0 chr5 158363648 158363805 -44721727 - L1PA15 LINE L1 -815 5331 5175 1843 157 32 0 chr5 158363808 158364152 -44721380 - L1MA2 LINE L1 0 6304 5950 15484 27 6 0 chr5 158364165 158366773 -44718759 - L1PA3 LINE L1 -11 6144 3531 1717 193 3 7 chr5 158366776 158367081 -44718451 - AluJo SINE Alu -8 304 1 6790 137 15 32 chr5 158367081 158367251 -44718281 - L1MA2 LINE L1 -355 5949 5778 2117 112 14 0 chr5 158367251 158367547 -44717985 - AluSp SINE Alu -13 300 1 6790 137 15 32 chr5 158367547 158369176 -44716356 - L1MA2 LINE L1 -526 5778 4185 930 120 0 0 chr5 158369176 158369309 -44716223 - FLAM_C SINE Alu 0 133 1 6790 137 15 32 chr5 158369309 158369542 -44715990 - L1MA2 LINE L1 -2119 4185 3950 4733 118 4 4 chr5 158369544 158370256 -44715276 - L1PB2 LINE L1 -7 6144 5433 1421 207 91 0 chr5 158370595 158370981 -44714551 + MER63C DNA MER1_type 52 472 -458 5587 146 30 20 chr5 158371011 158372742 -44712790 - L1PB1 LINE L1 0 7570 5836 3409 83 16 0 chr5 158372746 158373192 -44712340 - MLT2A2 LTR ERVL 0 453 1 41095 75 10 13 chr5 158373192 158376980 -44708552 - HERVL-A2 LTR ERVL 0 5654 1835 322 154 0 0 chr5 158376980 158377032 -44708500 - L1MA2 LINE L1 -2319 3827 3776 41095 75 10 13 chr5 158377032 158378862 -44706670 - HERVL-A2 LTR ERVL -3819 1835 1 3394 87 16 0 chr5 158378862 158379308 -44706224 - MLT2A2 LTR ERVL 0 453 1 9810 179 28 10 chr5 158379308 158381916 -44703616 - L1PB1 LINE L1 -1729 5836 3173 2256 109 0 10 chr5 158381916 158382218 -44703314 - AluSc SINE Alu -10 299 1 9810 179 28 10 chr5 158382218 158382340 -44703192 - L1PB1 LINE L1 -4392 3173 3055 * 10179 184 50 10 chr5 158382338 158382588 -44702944 - L1PB1 LINE L1 -5499 2066 1827 306 50 0 0 chr5 158382588 158382628 -44702904 + (TC)n Simple_repeat Simple_repeat 1 40 0 10179 184 50 10 chr5 158382628 158384348 -44701184 - L1PB1 LINE L1 -5738 1827 17 4713 201 24 8 chr5 158384355 158385459 -44700073 - L1PB2 LINE L1 -971 5175 4055 2346 251 52 24 chr5 158385453 158385570 -44699962 - L1MEc LINE L1 -3360 2855 2743 * 2046 174 11 6 chr5 158385570 158385933 -44699599 + MLT1A1 LTR MaLR 1 365 0 2346 251 52 24 chr5 158385933 158386758 -44698774 - L1MEc LINE L1 -3472 2743 1915 742 239 137 51 chr5 158386758 158387188 -44698344 + MLT1C LTR MaLR 1 467 0 2346 251 52 24 chr5 158387188 158387375 -44698157 - L1MEc LINE L1 -4300 1915 1735 2219 116 0 0 chr5 158387535 158387838 -44697694 + AluSc SINE Alu 1 303 -6 192 347 74 25 chr5 158387839 158387960 -44697572 - L3 LINE CR1 -481 1096 970 989 179 24 6 chr5 158387961 158388129 -44697403 - AluJo SINE Alu -22 290 120 191 200 0 17 chr5 158388789 158388849 -44696683 + (TA)n Simple_repeat Simple_repeat 1 59 0 25 31 0 0 chr5 158388978 158389010 -44696522 + AT_rich Low_complexity Low_complexity 1 32 0 365 314 118 18 chr5 158389674 158389894 -44695638 + HAL1b LINE L1 15 256 -1092 255 359 39 8 chr5 158389982 158390110 -44695422 + L3 LINE CR1 977 1108 -469 724 131 19 0 chr5 158390160 158390267 -44695265 + AluJo SINE Alu 32 140 -172 1197 222 8 12 chr5 158390267 158390515 -44695017 + AluJo SINE Alu 51 297 -15 2029 118 0 39 chr5 158391578 158391926 -44693606 + AluSx SINE Alu 2 312 0 673 154 0 51 chr5 158391934 158392051 -44693481 + FLAM_C SINE Alu 5 115 -18 357 24 0 0 chr5 158392054 158392096 -44693436 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 371 157 12 24 chr5 158392097 158392180 -44693352 - L1MC5 LINE L1 -49 7912 7831 977 26 0 0 chr5 158392499 158392650 -44692882 + L1PA5 LINE L1 6023 6173 0 21 57 0 0 chr5 158396564 158396599 -44688933 + AT_rich Low_complexity Low_complexity 1 35 0 932 106 0 8 chr5 158397362 158397494 -44688038 - FLAM_C SINE Alu -2 131 1 188 340 0 0 chr5 158397759 158397812 -44687720 + L2 LINE L2 3220 3272 0 715 272 89 14 chr5 158400680 158401118 -44684414 - L1M4 LINE L1 -2563 3583 3113 1430 219 86 37 chr5 158401123 158401506 -44684026 - Charlie1a DNA MER1_type -1053 402 1 1462 240 64 102 chr5 158401506 158401857 -44683675 - L1MC5 LINE L1 -797 7147 6784 530 215 9 0 chr5 158401857 158401964 -44683568 - L1MD2 LINE L1 -10 6349 6242 1462 240 64 102 chr5 158401964 158402700 -44682832 - L1MC5 LINE L1 -1160 6784 6074 248 240 27 13 chr5 158402714 158402789 -44682743 - L1MC5 LINE L1 -1897 5894 5819 268 221 94 74 chr5 158402812 158402866 -44682666 - L1MC5 LINE L1 -956 5173 5122 2263 114 0 0 chr5 158402866 158403164 -44682368 - AluSx SINE Alu -14 298 1 268 221 94 74 chr5 158403164 158403258 -44682274 - L1MC5 LINE L1 -1007 5122 5022 760 202 101 0 chr5 158403261 158403439 -44682093 + MER3 DNA MER1_type 1 196 -13 1045 268 65 19 chr5 158403440 158403914 -44681618 - L1MC5 LINE L1 -1103 5026 4531 233 259 49 0 chr5 158403924 158404005 -44681527 - L1MC5 LINE L1 -1558 4571 4487 2660 33 0 0 chr5 158404005 158404308 -44681224 - AluY SINE Alu -8 303 1 1211 144 0 0 chr5 158404429 158404602 -44680930 + AluSg/x SINE Alu 124 296 -16 2541 54 0 0 chr5 158404602 158404899 -44680633 + AluY SINE Alu 1 297 -14 1074 281 56 30 chr5 158404919 158405077 -44680455 - L1MC5 LINE L1 -1796 4333 4181 765 171 0 50 chr5 158405077 158405217 -44680315 - FLAM_C SINE Alu 0 133 1 1074 281 56 30 chr5 158405217 158405680 -44679852 - L1MC5 LINE L1 -1948 4181 3696 21 0 0 0 chr5 158405699 158405720 -44679812 + AT_rich Low_complexity Low_complexity 1 21 0 695 148 49 0 chr5 158405723 158405845 -44679687 + L1PA13 LINE L1 6030 6157 -6 210 118 0 0 chr5 158405848 158405882 -44679650 + (CA)n Simple_repeat Simple_repeat 2 35 0 562 266 44 51 chr5 158405883 158406008 -44679524 - L1MC5 LINE L1 -2429 3700 3576 1676 168 70 48 chr5 158406008 158406365 -44679167 - MLT1A1 LTR MaLR 0 365 1 562 266 44 51 chr5 158406365 158406532 -44679000 - L1MC5 LINE L1 -2553 3576 3410 349 215 32 11 chr5 158406656 158406749 -44678783 - L1ME3A LINE L1 -291 5879 5785 * 619 260 28 44 chr5 158406747 158407108 -44678424 - L1MC5 LINE L1 -3419 2710 2356 427 270 101 7 chr5 158407095 158407243 -44678289 - L1MC5 LINE L1 -4704 1606 1445 * 369 287 25 8 chr5 158407262 158407384 -44678148 - L1MC5 LINE L1 -5103 1026 903 588 246 106 0 chr5 158407442 158407584 -44677948 - FRAM SINE Alu -20 156 1 341 330 81 86 chr5 158407611 158408144 -44677388 - L1MC5 LINE L1 -5292 827 298 909 83 21 7 chr5 158408159 158408304 -44677228 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 2093 108 0 4 chr5 158408307 158408586 -44676946 - AluSg1 SINE Alu -31 278 1 965 157 6 13 chr5 158409234 158409393 -44676139 + AluSg/x SINE Alu 136 293 -19 2286 119 0 3 chr5 158409946 158410257 -44675275 + AluSx SINE Alu 1 310 -2 281 341 162 15 chr5 158410465 158411118 -44674414 - L2 LINE L2 -949 2365 1617 216 86 0 0 chr5 158411142 158411177 -44674355 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1861 146 4 0 chr5 158411182 158411449 -44674083 - AluJb SINE Alu -35 277 10 6247 129 29 23 chr5 158412008 158413583 -44671949 + L1MA6 LINE L1 4220 5809 -491 189 0 0 0 chr5 158413583 158413604 -44671928 + (TA)n Simple_repeat Simple_repeat 2 22 0 6247 129 29 23 chr5 158413604 158414099 -44671433 + L1MA6 LINE L1 5809 6300 0 406 98 77 0 chr5 158414130 158414207 -44671325 + L1MA7 LINE L1 5771 5856 -299 5327 261 79 40 chr5 158414224 158418296 -44667236 - L1MDa LINE L1 -1229 4851 564 2191 137 97 8 chr5 158418307 158418700 -44666832 - MSTA LTR MaLR 0 428 1 3285 156 6 18 chr5 158418720 158419266 -44666266 - MSTA-int LTR MaLR -13 1638 1100 475 83 0 0 chr5 158419266 158419338 -44666194 + AluSp/q SINE Alu 240 311 -2 1838 167 51 6 chr5 158419338 158419691 -44665841 - MSTA-int LTR MaLR -1282 369 1 2640 107 58 22 chr5 158419691 158420104 -44665428 - MSTA LTR MaLR 0 428 1 1228 282 47 50 chr5 158420104 158420660 -44664872 - L1MDa LINE L1 -5490 580 27 28 0 0 47 chr5 158420728 158420750 -44664782 + AT_rich Low_complexity Low_complexity 1 22 -19 11805 131 6 7 chr5 158420750 158422250 -44663282 - L1PA11 LINE L1 -2 6172 4648 2757 97 8 0 chr5 158422250 158422622 -44662910 + THE1C LTR MaLR 1 375 0 11805 131 6 7 chr5 158422622 158423791 -44661741 - L1PA11 LINE L1 -1526 4648 3479 28 0 0 47 chr5 158423791 158423811 -44661721 + AT_rich Low_complexity Low_complexity 22 41 0 1877 123 97 0 chr5 158424234 158424543 -44660989 + MER44D DNA MER2_type 1 609 0 267 248 73 22 chr5 158424610 158424747 -44660785 + L1ME LINE L1 5739 5882 -239 27 49 0 0 chr5 158425243 158425284 -44660248 + AT_rich Low_complexity Low_complexity 1 41 0 1036 135 0 0 chr5 158425916 158426079 -44659453 + Tigger7 DNA MER2_type 2288 2450 -37 1456 192 12 0 chr5 158426100 158426355 -44659177 + AluJb SINE Alu 35 292 -20 235 286 220 0 chr5 158427230 158427321 -44658211 + MIR SINE MIR 94 204 -58 244 260 219 10 chr5 158428127 158428223 -44657309 - MIR SINE MIR -58 204 89 616 348 18 13 chr5 158428301 158428525 -44657007 - L3 LINE CR1 -947 630 406 228 367 57 14 chr5 158428620 158428833 -44656699 - L3 LINE CR1 -1213 364 49 2283 59 35 7 chr5 158428859 158429146 -44656386 - AluY SINE Alu -16 295 1 25 0 0 0 chr5 158429222 158429247 -44656285 + AT_rich Low_complexity Low_complexity 1 25 0 226 234 47 16 chr5 158430324 158430388 -44655144 - L2 LINE L2 -9 3304 3239 601 284 108 10 chr5 158430771 158430975 -44654557 - MIR SINE MIR -36 226 3 243 295 0 0 chr5 158433398 158433459 -44652073 + CT-rich Low_complexity Low_complexity 3 63 0 425 303 111 95 chr5 158433459 158433803 -44651729 - L1M2 LINE L1 -5472 1377 1017 249 119 0 0 chr5 158433803 158433845 -44651687 + (CTG)n Simple_repeat Simple_repeat 2 43 0 425 303 111 95 chr5 158433845 158434111 -44651421 - L1M2 LINE L1 -5832 1017 757 182 146 0 24 chr5 158438676 158438717 -44646815 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 239 238 63 0 chr5 158438832 158438895 -44646637 - MIR SINE MIR -120 142 76 1093 177 9 44 chr5 158439110 158439336 -44646196 - AluJo SINE Alu -9 303 86 2449 87 0 0 chr5 158439632 158439932 -44645600 - AluSc SINE Alu -8 301 2 1906 106 85 0 chr5 158441477 158441759 -44643773 - AluSq SINE Alu -7 306 1 1498 218 95 58 chr5 158441847 158442447 -44643085 - MLT1E3 LTR MaLR 0 624 3 23 33 0 0 chr5 158442755 158442785 -44642747 + AT_rich Low_complexity Low_complexity 1 30 0 1951 142 0 0 chr5 158443240 158443549 -44641983 + AluSx SINE Alu 1 309 0 195 302 57 0 chr5 158443793 158443846 -44641686 - L2 LINE L2 -74 3239 3184 2351 82 0 0 chr5 158447323 158447615 -44637917 + AluSc SINE Alu 3 294 -15 2213 123 0 0 chr5 158448268 158448569 -44636963 + AluSx SINE Alu 6 306 -6 225 94 0 0 chr5 158448626 158448658 -44636874 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 258 32 0 0 chr5 158448659 158448690 -44636842 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 201 195 0 0 chr5 158449744 158449785 -44635747 + (TG)n Simple_repeat Simple_repeat 1 41 0 272 146 36 0 chr5 158449942 158449997 -44635535 + GA-rich Low_complexity Low_complexity 2 58 0 717 285 44 13 chr5 158450443 158450671 -44634861 - MIR SINE MIR 0 262 28 536 295 98 34 chr5 158451677 158451911 -44633621 + MIR SINE MIR 3 251 -11 2239 96 0 0 chr5 158451917 158452208 -44633324 - AluY SINE Alu -20 291 1 2482 57 7 0 chr5 158452711 158453010 -44632522 - AluY SINE Alu -10 301 1 740 184 61 122 chr5 158453795 158453903 -44631629 + MER5A DNA MER1_type 1 93 -96 2370 109 0 0 chr5 158453903 158454214 -44631318 + AluSx SINE Alu 1 311 -1 740 184 61 122 chr5 158454214 158454301 -44631231 + MER5A DNA MER1_type 93 184 -5 789 292 49 12 chr5 158454421 158454664 -44630868 + MIR SINE MIR 11 262 0 431 301 110 0 chr5 158457960 158458106 -44627426 - MIR SINE MIR -27 235 74 349 265 24 0 chr5 158458113 158458196 -44627336 + L2 LINE L2 3188 3272 0 745 115 23 8 chr5 158458362 158458492 -44627040 - MLT1D LTR MaLR 0 505 374 1040 236 51 15 chr5 158458492 158458826 -44626706 - MLT1C-int LTR MaLR -1385 350 5 286 98 0 0 chr5 158458830 158458871 -44626661 - MLT1C LTR MaLR 0 467 427 * 501 187 11 0 chr5 158458867 158458958 -44626574 - MLT1D LTR MaLR -412 93 2 351 0 0 0 chr5 158458989 158459028 -44626504 + (TG)n Simple_repeat Simple_repeat 2 40 0 405 0 0 0 chr5 158460436 158460481 -44625051 + (CA)n Simple_repeat Simple_repeat 1 45 0 222 62 0 0 chr5 158460484 158460516 -44625016 + (GA)n Simple_repeat Simple_repeat 1 32 0 2188 127 45 0 chr5 158460598 158460930 -44624602 + MER7A DNA MER2_type 2 346 0 345 279 106 19 chr5 158460936 158461097 -44624435 - L2 LINE L2 -10 3303 3129 2090 134 0 3 chr5 158461392 158461684 -44623848 + AluJb SINE Alu 1 291 -21 340 344 53 39 chr5 158461702 158461963 -44623569 - L2 LINE L2 -272 3000 2738 725 174 35 0 chr5 158462040 158462184 -44623348 - Tigger7 DNA MER2_type 0 2487 2339 * 1881 181 9 3 chr5 158462179 158462521 -44623011 - Tigger7 DNA MER2_type -389 344 1 403 238 127 8 chr5 158462844 158462970 -44622562 + MIR SINE MIR 113 253 -9 225 209 116 0 chr5 158462989 158463032 -44622500 + L2 LINE L2 3233 3280 -33 552 197 14 82 chr5 158463473 158463620 -44621912 + MER45A DNA AcHobo 42 178 0 852 144 26 100 chr5 158464002 158464231 -44621301 - L1MC1 LINE L1 -6 6327 6116 2157 149 6 0 chr5 158464240 158464582 -44620950 - MER7A DNA MER2_type -3 343 2 240 35 0 0 chr5 158464639 158464668 -44620864 + (TG)n Simple_repeat Simple_repeat 2 30 0 232 272 37 12 chr5 158464811 158464892 -44620640 - L1MC1 LINE L1 -2117 5691 5609 882 247 69 12 chr5 158465091 158465338 -44620194 - MIR SINE MIR -1 261 1 220 356 27 69 chr5 158465380 158465536 -44619996 + L2 LINE L2 3091 3239 -33 2129 113 10 0 chr5 158465536 158465828 -44619704 - AluSq SINE Alu -18 295 1 220 356 27 69 chr5 158465828 158465859 -44619673 + L2 LINE L2 3239 3270 -2 * 321 244 104 67 chr5 158465858 158466022 -44619510 - MIR SINE MIR -84 178 9 423 343 48 16 chr5 158466241 158466489 -44619043 - MIR SINE MIR 0 262 7 1522 179 3 46 chr5 158467193 158467306 -44618226 + AluJo SINE Alu 1 117 -195 393 39 0 0 chr5 158467306 158467357 -44618175 + (TC)n Simple_repeat Simple_repeat 2 52 0 243 0 0 0 chr5 158467356 158467383 -44618149 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 1522 179 3 46 chr5 158467357 158467383 -44618149 + AluJo SINE Alu 117 143 -169 2484 85 0 0 chr5 158467383 158467688 -44617844 - AluSq SINE Alu -8 305 1 1522 179 3 46 chr5 158467688 158467880 -44617652 + AluJo SINE Alu 143 294 -18 26 104 0 0 chr5 158467933 158468029 -44617503 + AT_rich Low_complexity Low_complexity 1 96 0 631 308 34 13 chr5 158468113 158468350 -44617182 - MIR SINE MIR -2 260 19 397 265 108 99 chr5 158469478 158469701 -44615831 + MIR SINE MIR 33 257 -5 394 247 44 32 chr5 158469704 158469834 -44615698 - MIR SINE MIR -62 146 48 1856 147 0 4 chr5 158470301 158470573 -44614959 - AluSx SINE Alu -41 271 1 200 328 0 0 chr5 158472002 158472066 -44613466 - MIR SINE MIR -12 250 187 663 259 39 44 chr5 158472156 158472395 -44613137 - L2 LINE L2 0 3272 2982 2605 30 3 0 chr5 158472395 158472692 -44612840 + AluY SINE Alu 14 311 0 663 259 39 44 chr5 158472692 158472756 -44612776 - L2 LINE L2 -290 2982 2919 932 179 37 0 chr5 158472766 158472928 -44612604 + FRAM SINE Alu 1 167 -9 1912 273 64 89 chr5 158472940 158473167 -44612365 - L2 LINE L2 -404 2910 2679 2280 82 0 16 chr5 158473167 158473473 -44612059 - AluY SINE Alu -10 301 1 1912 273 64 89 chr5 158473473 158474147 -44611385 - L2 LINE L2 -635 2679 2031 430 122 14 0 chr5 158474154 158474228 -44611304 + MER34B LTR ERV1 2 76 -489 1775 148 3 68 chr5 158474228 158474539 -44610993 + AluSx SINE Alu 1 291 -21 2622 100 50 60 chr5 158474558 158475039 -44610493 + MER34B LTR ERV1 61 536 -29 384 244 186 36 chr5 158475068 158475261 -44610271 - L2 LINE L2 -1308 2006 1785 284 319 16 87 chr5 158475532 158475717 -44609815 + L2 LINE L2 3009 3180 -92 1533 190 51 20 chr5 158476132 158476427 -44609105 + AluJo SINE Alu 1 304 -8 180 179 0 0 chr5 158476795 158476834 -44608698 + GA-rich Low_complexity Low_complexity 2 40 0 204 40 0 0 chr5 158478040 158478065 -44607467 + (TC)n Simple_repeat Simple_repeat 2 26 0 749 177 0 0 chr5 158479665 158479789 -44605743 + FLAM_C SINE Alu 1 124 -19 1038 215 5 23 chr5 158479914 158480133 -44605399 + MER20 DNA MER1_type 5 219 0 394 221 79 24 chr5 158480136 158480263 -44605269 + MER94 DNA DNA 1 134 0 411 241 165 12 chr5 158480279 158480449 -44605083 + MIR SINE MIR 64 259 -3 354 254 0 0 chr5 158481457 158481567 -44603965 + (CA)n Simple_repeat Simple_repeat 1 110 0 313 261 59 84 chr5 158482119 158482322 -44603210 - L1ME4a LINE L1 -6 6115 5918 2391 86 0 10 chr5 158482322 158482625 -44602907 - AluSx SINE Alu -12 300 1 909 182 0 25 chr5 158483517 158483676 -44601856 + FRAM SINE Alu 11 165 -11 2452 79 7 0 chr5 158484448 158484752 -44600780 - AluSg SINE Alu -4 306 1 373 244 12 24 chr5 158485004 158485086 -44600446 - MIR SINE MIR -63 145 65 27 0 0 0 chr5 158485315 158485342 -44600190 + AT_rich Low_complexity Low_complexity 1 27 0 273 287 0 0 chr5 158485996 158486090 -44599442 - L1ME4a LINE L1 -317 5804 5711 228 268 178 25 chr5 158486190 158486347 -44599185 - L1ME4a LINE L1 -531 5590 5410 235 289 13 0 chr5 158486984 158487060 -44598472 + MIR SINE MIR 186 262 0 248 374 0 19 chr5 158487107 158487262 -44598270 + CT-rich Low_complexity Low_complexity 2 153 0 2073 125 23 3 chr5 158487571 158487876 -44597656 + AluSq SINE Alu 1 311 -2 237 237 166 7 chr5 158488411 158488550 -44596982 + L1ME4a LINE L1 5326 5486 -2322 211 236 18 0 chr5 158489220 158489275 -44596257 - L2 LINE L2 -1 3312 3257 1763 175 32 23 chr5 158489305 158489613 -44595919 + AluJo SINE Alu 1 311 -1 318 256 139 23 chr5 158489630 158489759 -44595773 + L1ME4a LINE L1 5966 6109 -12 4417 151 21 57 chr5 158489772 158489839 -44595693 + L1MB3 LINE L1 5260 5328 -855 1879 167 0 3 chr5 158489839 158490132 -44595400 + AluJb SINE Alu 1 292 -20 4417 151 21 57 chr5 158490132 158491018 -44594514 + L1MB3 LINE L1 5328 6179 -4 213 94 0 0 chr5 158491076 158491108 -44594424 + (GA)n Simple_repeat Simple_repeat 1 32 0 493 255 42 50 chr5 158491137 158491376 -44594156 - MLT1J LTR MaLR 0 511 275 3240 31 0 0 chr5 158491599 158491981 -44593551 + L1PA3 LINE L1 5773 6154 -1 21 57 0 0 chr5 158492076 158492111 -44593421 + AT_rich Low_complexity Low_complexity 1 35 0 38 93 0 0 chr5 158492283 158492391 -44593141 + AT_rich Low_complexity Low_complexity 1 108 0 2014 132 3 0 chr5 158492493 158492782 -44592750 + AluSx SINE Alu 7 296 -16 530 233 129 37 chr5 158492840 158492882 -44592650 + MER5B DNA MER1_type 1 38 -140 646 190 15 72 chr5 158492882 158493077 -44592455 + MER53 DNA DNA 3 186 -3 530 233 129 37 chr5 158493077 158493197 -44592335 + MER5B DNA MER1_type 38 178 0 4067 266 87 71 chr5 158494564 158496356 -44589176 + L2 LINE L2 16 1835 -1479 669 25 0 0 chr5 158496368 158496447 -44589085 + (TTATA)n Simple_repeat Simple_repeat 4 82 0 2075 133 0 0 chr5 158496447 158496732 -44588800 - AluSx SINE Alu -27 285 1 303 237 51 8 chr5 158496874 158496992 -44588540 - L1MC4 LINE L1 -2 8040 7918 285 267 40 0 chr5 158497058 158497159 -44588373 - L1MC4 LINE L1 -143 7899 7795 2225 96 0 3 chr5 158497167 158497488 -44588044 - AluSx SINE Alu 0 312 1 738 136 0 15 chr5 158497492 158497624 -44587908 - L1MA9 LINE L1 -365 5947 5818 * 2011 169 13 5 chr5 158497622 158497995 -44587537 + L1MA9 LINE L1 5459 5834 -478 1394 81 5 76 chr5 158498095 158498306 -44587226 - AluSp SINE Alu -22 291 96 2036 128 0 7 chr5 158498422 158498734 -44586798 - AluSx SINE Alu 0 314 5 28 0 0 0 chr5 158498738 158498766 -44586766 + AT_rich Low_complexity Low_complexity 1 28 0 682 285 84 38 chr5 158498904 158499585 -44585947 - L1MEd LINE L1 -4871 1248 537 24 0 0 0 chr5 158499667 158499691 -44585841 + AT_rich Low_complexity Low_complexity 1 24 0 1327 208 96 0 chr5 158500027 158500340 -44585192 + L1ME1 LINE L1 5817 6159 -7 390 297 27 9 chr5 158500463 158500574 -44584958 + L2 LINE L2 3201 3313 0 2011 144 6 35 chr5 158500624 158500943 -44584589 + AluJo SINE Alu 1 310 -2 291 292 67 42 chr5 158500981 158501101 -44584431 + MIR SINE MIR 20 142 -66 292 216 48 0 chr5 158501591 158501716 -44583816 + (TTATA)n Simple_repeat Simple_repeat 1 131 0 434 361 129 26 chr5 158501933 158502274 -44583258 + L2 LINE L2 2895 3270 -2 1774 309 153 8 chr5 158502932 158503729 -44581803 + L2 LINE L2 1847 2759 -555 405 282 144 11 chr5 158503736 158503910 -44581622 + L2 LINE L2 3117 3313 0 631 271 15 30 chr5 158504480 158504683 -44580849 - L2 LINE L2 0 3313 3114 384 209 70 12 chr5 158504715 158504801 -44580731 + MLT1D LTR MaLR 1 91 -414 843 341 22 13 chr5 158504849 158505212 -44580320 - L2 LINE L2 -243 3070 2702 234 137 78 0 chr5 158505215 158505266 -44580266 + L1MA4A LINE L1 6242 6296 -7 1672 246 122 34 chr5 158505295 158506034 -44579498 - L1ME3 LINE L1 -23 6139 5336 26 64 0 0 chr5 158510007 158510054 -44575478 + AT_rich Low_complexity Low_complexity 1 47 0 293 298 49 24 chr5 158510409 158510649 -44574883 + L1MC4 LINE L1 6409 6588 -1220 * 1216 237 45 35 chr5 158510644 158511019 -44574513 + L1MC4a LINE L1 7115 7493 -315 * 5235 111 3 4 chr5 158511007 158511764 -44573768 + L1PA14 LINE L1 5397 6152 -9 833 238 43 50 chr5 158511854 158512135 -44573397 + L1MC4 LINE L1 7601 7879 -163 272 252 35 96 chr5 158512167 158512282 -44573250 - MLT1H LTR MaLR -7 542 435 279 221 137 84 chr5 158512317 158512437 -44573095 - MLT1H LTR MaLR -246 303 168 1691 213 58 20 chr5 158512437 158512887 -44572645 - MLT1C LTR MaLR 0 467 1 279 221 137 84 chr5 158512887 158512956 -44572576 - MLT1H LTR MaLR -381 168 104 1238 253 36 47 chr5 158513193 158513577 -44571955 - MER92A LTR ERV1 -5 407 28 2296 116 0 0 chr5 158513996 158514332 -44571200 - L1MA8 LINE L1 -414 5898 5563 1652 169 61 11 chr5 158514334 158514695 -44570837 + L1MA8 LINE L1 5912 6290 -1 1514 178 45 14 chr5 158514757 158515043 -44570489 - AluJo SINE Alu -17 295 1 813 270 34 49 chr5 158515326 158515618 -44569914 + L1ME3A LINE L1 5268 5552 -610 2113 120 3 0 chr5 158515618 158515910 -44569622 - AluSg SINE Alu -17 293 1 813 270 34 49 chr5 158515910 158516065 -44569467 + L1ME3A LINE L1 5552 5708 -454 2574 212 30 6 chr5 158516133 158516666 -44568866 + MER90 LTR ERV1 69 614 0 251 307 50 21 chr5 158516666 158516806 -44568726 + L1ME3A LINE L1 5789 5932 -238 464 220 55 9 chr5 158517095 158517204 -44568328 + MIR SINE MIR 24 137 -71 545 348 56 16 chr5 158517437 158517687 -44567845 + MIR SINE MIR 2 261 -1 2405 90 0 7 chr5 158521637 158521947 -44563585 - AluSq SINE Alu -5 308 1 2098 134 0 0 chr5 158522093 158522392 -44563140 + AluSx SINE Alu 1 299 -13 1005 173 0 0 chr5 158522873 158523029 -44562503 + FRAM SINE Alu 4 159 -17 26 0 0 0 chr5 158523383 158523409 -44562123 + AT_rich Low_complexity Low_complexity 1 26 0 1939 127 25 51 chr5 158523549 158523864 -44561668 - AluSx SINE Alu -5 307 1 2369 110 0 0 chr5 158524213 158524522 -44561010 + AluSc SINE Alu 1 309 0 21 71 0 0 chr5 158524568 158524610 -44560922 + AT_rich Low_complexity Low_complexity 1 42 0 3042 233 84 16 chr5 158524931 158525896 -44559636 - L1MD3 LINE L1 -5 7990 6960 2124 130 0 0 chr5 158526538 158526839 -44558693 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr5 158526978 158527002 -44558530 + AT_rich Low_complexity Low_complexity 1 24 0 2089 92 29 0 chr5 158527004 158527276 -44558256 + AluSq SINE Alu 1 280 -33 2316 94 10 3 chr5 158527318 158527625 -44557907 + AluSg SINE Alu 1 309 -1 353 265 30 60 chr5 158528166 158528332 -44557200 + L1ME3 LINE L1 850 1010 -5109 326 159 43 0 chr5 158528352 158528421 -44557111 - L1MD3 LINE L1 -964 7031 6960 933 265 99 17 chr5 158528586 158528886 -44556646 - MLT1G LTR MaLR -7 583 237 455 246 52 18 chr5 158528880 158529013 -44556519 - MLT1H1 LTR MaLR -421 134 1 * 237 211 79 13 chr5 158529014 158529090 -44556442 + L1ME3 LINE L1 1085 1165 -4954 1878 155 3 17 chr5 158529206 158529497 -44556035 + AluSx SINE Alu 1 287 -25 192 40 0 0 chr5 158529497 158529522 -44556010 + (GA)n Simple_repeat Simple_repeat 2 26 0 271 303 133 31 chr5 158530455 158530838 -44554694 + HAL1 LINE L1 1109 1530 -977 410 322 63 20 chr5 158531345 158531600 -44553932 + L1ME3 LINE L1 2093 2358 -3771 348 296 108 31 chr5 158531602 158532301 -44553231 + L1ME3 LINE L1 2406 3164 -2965 2103 95 3 31 chr5 158532301 158532618 -44552914 + AluY SINE Alu 1 308 -3 348 296 108 31 chr5 158532618 158532638 -44552894 + L1ME3 LINE L1 3164 3181 -2948 263 128 49 20 chr5 158532653 158532755 -44552777 + (TA)n Simple_repeat Simple_repeat 1 105 0 23 54 0 0 chr5 158532928 158532965 -44552567 + AT_rich Low_complexity Low_complexity 1 37 0 268 389 8 4 chr5 158533122 158533361 -44552171 + L1ME3 LINE L1 3982 4221 -1908 379 286 88 42 chr5 158533493 158533710 -44551822 + L1ME3 LINE L1 5061 5287 -842 410 343 66 24 chr5 158533735 158534204 -44551328 + L1ME3 LINE L1 5361 5849 -296 372 22 0 0 chr5 158534664 158534709 -44550823 + (TATG)n Simple_repeat Simple_repeat 2 46 0 387 167 90 13 chr5 158534709 158534781 -44550751 - FLAM SINE Alu -17 116 39 1611 214 60 58 chr5 158534878 158535379 -44550153 - MLT1D LTR MaLR -2 503 2 575 294 75 60 chr5 158535531 158535572 -44549960 + L1M4 LINE L1 2436 2475 -3654 2134 116 0 3 chr5 158535572 158535864 -44549668 - AluSx SINE Alu -20 292 2 575 294 75 60 chr5 158535864 158536167 -44549365 + L1M4 LINE L1 2475 2795 -3334 2283 103 30 0 chr5 158536167 158536469 -44549063 - AluSx SINE Alu 0 312 2 575 294 75 60 chr5 158536469 158536694 -44548838 + L1M4 LINE L1 2795 3015 -3114 1647 201 0 0 chr5 158536728 158537011 -44548521 + AluJb SINE Alu 14 296 -16 2240 110 7 0 chr5 158537095 158537394 -44548138 + AluSq SINE Alu 1 301 -12 2038 114 37 10 chr5 158537578 158537877 -44547655 - AluSx SINE Alu -5 307 1 832 177 29 63 chr5 158537892 158538067 -44547465 + AluJo SINE Alu 1 169 -143 1599 112 0 0 chr5 158538067 158538290 -44547242 + AluSg/x SINE Alu 88 310 0 1408 275 88 37 chr5 158538392 158539506 -44546026 + L1M4 LINE L1 4355 5540 -621 635 164 66 0 chr5 158539657 158539779 -44545753 + AluJo SINE Alu 2 131 -171 446 246 34 6 chr5 158539780 158539955 -44545577 + GA-rich Low_complexity Low_complexity 1 180 0 857 193 14 0 chr5 158539958 158540103 -44545429 + AluJo SINE Alu 138 284 -28 23 33 0 0 chr5 158540648 158540678 -44544854 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 158541477 158541513 -44544019 + AT_rich Low_complexity Low_complexity 1 36 0 515 119 119 18 chr5 158542032 158542141 -44543391 + FLAM_C SINE Alu 11 130 -13 2880 13 0 0 chr5 158543236 158543552 -44541980 + AluYb8 SINE Alu 1 316 -2 2309 64 3 14 chr5 158544322 158544617 -44540915 + AluSc SINE Alu 1 292 -17 189 0 111 0 chr5 158545175 158545211 -44540321 + T-rich Low_complexity Low_complexity 1 40 0 2177 71 0 4 chr5 158545212 158545493 -44540039 - AluSx SINE Alu -32 280 1 2246 106 10 0 chr5 158545765 158546067 -44539465 + AluSg SINE Alu 1 305 -5 332 294 59 37 chr5 158546307 158546443 -44539089 + L2 LINE L2 3134 3272 0 657 368 63 17 chr5 158547019 158547588 -44537944 - L2 LINE L2 -215 3057 2454 21 0 0 31 chr5 158547940 158547956 -44537576 + AT_rich Low_complexity Low_complexity 1 16 -15 2210 123 0 0 chr5 158547956 158548256 -44537276 + AluSx SINE Alu 1 300 -12 21 0 0 31 chr5 158548256 158548271 -44537261 + AT_rich Low_complexity Low_complexity 16 31 0 205 260 0 20 chr5 158548309 158548359 -44537173 - MIR SINE MIR -113 149 101 215 295 13 51 chr5 158548386 158548464 -44537068 - MIR SINE MIR -120 142 68 * 560 303 157 31 chr5 158548451 158548903 -44536629 - L2 LINE L2 -1087 2227 1719 1920 131 14 3 chr5 158548916 158549222 -44536310 - AluSx SINE Alu 0 309 1 180 328 16 0 chr5 158549522 158549583 -44535949 - MIR SINE MIR 0 262 201 2093 120 3 10 chr5 158549590 158549943 -44535589 - AluSc SINE Alu 0 351 1 373 313 37 34 chr5 158549952 158550104 -44535428 - MIR SINE MIR -67 141 39 2228 99 7 3 chr5 158550115 158550419 -44535113 - AluSx SINE Alu -7 305 1 2165 116 7 0 chr5 158550548 158550841 -44534691 - AluSx SINE Alu -17 295 1 185 346 37 0 chr5 158551198 158551279 -44534253 + L2 LINE L2 3230 3313 0 22 0 0 0 chr5 158552062 158552084 -44533448 + AT_rich Low_complexity Low_complexity 1 22 0 184 30 61 0 chr5 158552797 158552830 -44532702 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2542 72 0 0 chr5 158556512 158556819 -44528713 - AluY SINE Alu -4 307 1 1469 196 6 26 chr5 158557188 158557518 -44528014 - AluJb SINE Alu 0 312 8 368 238 81 0 chr5 158559281 158559435 -44526097 + L1MC4 LINE L1 7345 7615 -427 303 329 48 10 chr5 158559590 158559879 -44525653 + L1MC4 LINE L1 7717 8016 -26 1868 96 0 16 chr5 158559947 158560217 -44525315 - AluSc SINE Alu 0 301 36 1989 171 90 13 chr5 158560221 158560689 -44524843 - L1MC2 LINE L1 -21 6323 5820 372 326 56 9 chr5 158560694 158560909 -44524623 + L1MC5 LINE L1 7482 7706 -255 305 282 97 90 chr5 158563283 158563695 -44521837 - L1M2 LINE L1 -5886 963 549 2298 84 3 17 chr5 158564647 158564945 -44520587 - AluSp SINE Alu -15 298 5 196 180 40 0 chr5 158565539 158565589 -44519943 + L2 LINE L2 3261 3312 -1 2861 3 0 0 chr5 158570966 158571273 -44514259 - AluYa5 SINE Alu -4 307 1 1732 152 7 40 chr5 158571896 158572193 -44513339 - AluJb SINE Alu -25 287 1 507 320 0 0 chr5 158573010 158573138 -44512394 + L2 LINE L2 3145 3272 0 2541 55 0 3 chr5 158574620 158574929 -44510603 + AluY SINE Alu 2 309 -2 1571 193 32 3 chr5 158575437 158575722 -44509810 + AluJo SINE Alu 1 293 -19 1381 248 62 29 chr5 158577020 158577436 -44508096 + L1M4 LINE L1 8 437 -6105 270 0 0 0 chr5 158577463 158577493 -44508039 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 2527 56 0 3 chr5 158577494 158577798 -44507734 + AluY SINE Alu 1 303 -8 214 106 43 21 chr5 158577801 158577848 -44507684 + GA-rich Low_complexity Low_complexity 4 51 0 5444 222 78 37 chr5 158577848 158578320 -44507212 + L1M4 LINE L1 1385 1836 -4808 19592 39 0 2 chr5 158578320 158581474 -44504058 - L1PA4 LINE L1 -1 6154 2968 5444 222 78 37 chr5 158581474 158583436 -44502096 + L1M4 LINE L1 1836 3968 -2676 549 90 13 0 chr5 158583436 158583514 -44502018 + MADE1 DNA Mariner 2 80 0 5444 222 78 37 chr5 158583514 158583915 -44501617 + L1M4 LINE L1 3968 4351 -2293 1513 176 56 28 chr5 158583915 158584199 -44501333 + AluJo SINE Alu 1 292 -20 2572 33 0 3 chr5 158584218 158584517 -44501015 + AluY SINE Alu 1 298 -13 1892 214 32 11 chr5 158585159 158585626 -44499906 - L1M4 LINE L1 -1409 4737 4261 1966 152 3 7 chr5 158585626 158585928 -44499604 - AluJo SINE Alu -11 301 1 21 36 0 0 chr5 158586038 158586066 -44499466 + AT_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr5 158586539 158586589 -44498943 + AT_rich Low_complexity Low_complexity 1 50 0 917 270 25 13 chr5 158586682 158586919 -44498613 + MIR SINE MIR 20 259 -3 21 71 0 0 chr5 158587548 158587590 -44497942 + AT_rich Low_complexity Low_complexity 1 42 0 33 43 0 0 chr5 158592002 158592049 -44493483 + AT_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr5 158592404 158592439 -44493093 + AT_rich Low_complexity Low_complexity 1 35 0 1874 127 19 60 chr5 158592976 158593290 -44492242 + AluSx SINE Alu 1 301 -11 1867 141 0 7 chr5 158593833 158594146 -44491386 + AluJo SINE Alu 1 311 0 639 270 95 42 chr5 158595094 158595726 -44489806 + L1ME3A LINE L1 1030 1708 -4688 2142 137 0 3 chr5 158595726 158596025 -44489507 - AluSx SINE Alu -14 298 1 639 270 95 42 chr5 158596025 158596128 -44489404 + L1ME3A LINE L1 1708 1804 -4592 333 355 17 39 chr5 158596145 158596379 -44489153 + L1ME3A LINE L1 1858 2086 -4310 4006 270 83 27 chr5 158596442 158597098 -44488434 + L1ME3A LINE L1 2156 2774 -3441 2068 108 4 0 chr5 158597098 158597376 -44488156 + AluSg SINE Alu 1 279 -31 4006 270 83 27 chr5 158597376 158599205 -44486327 + L1ME3A LINE L1 2774 4783 -1432 * 6185 150 20 5 chr5 158599203 158600430 -44485102 + L1MC1 LINE L1 5163 6402 0 2409 264 69 27 chr5 158600427 158601815 -44483717 + L1ME3A LINE L1 4774 6225 -14 * 2159 264 34 7 chr5 158605306 158605984 -44479548 - L1ME3A LINE L1 -9 6161 5466 2264 140 5 75 chr5 158606060 158606474 -44479058 + MLT1B LTR MaLR 3 387 -3 2344 74 0 0 chr5 158606802 158607111 -44478421 - AluSp SINE Alu 0 309 1 1536 250 103 18 chr5 158607174 158607670 -44477862 - MER90 LTR ERV1 -4 610 73 25 31 0 0 chr5 158607872 158607904 -44477628 + AT_rich Low_complexity Low_complexity 1 32 0 389 302 113 74 chr5 158608189 158608766 -44476766 - HAL1 LINE L1 -609 1898 1280 1813 145 17 31 chr5 158608766 158609056 -44476476 - AluSx SINE Alu -26 286 1 389 302 113 74 chr5 158609056 158609287 -44476245 - HAL1 LINE L1 -1227 1280 1059 461 259 114 0 chr5 158609342 158609473 -44476059 - MIR SINE MIR -32 230 85 1136 210 31 19 chr5 158609473 158609730 -44475802 - MLT1A1 LTR MaLR 0 365 106 582 165 61 9 chr5 158609728 158609843 -44475689 - MLT1A1 LTR MaLR -205 160 40 * 338 220 0 0 chr5 158609843 158609902 -44475630 - MIR SINE MIR -173 89 31 676 213 74 0 chr5 158609928 158610050 -44475482 - FLAM_A SINE Alu -2 131 1 560 272 89 41 chr5 158610328 158610666 -44474866 - L1ME3A LINE L1 -200 5970 5617 * 6670 166 73 87 chr5 158610660 158610896 -44474636 + L1MDa LINE L1 1076 1314 -5226 2221 111 10 7 chr5 158610896 158611202 -44474330 + AluSx SINE Alu 1 307 -5 6670 166 73 87 chr5 158611202 158612534 -44472998 + L1MDa LINE L1 1314 2570 -3970 2246 113 7 0 chr5 158612534 158612844 -44472688 + AluSq SINE Alu 1 312 -1 6670 166 73 87 chr5 158612844 158613910 -44471622 + L1MDa LINE L1 2570 3650 -2890 22 0 0 0 chr5 158614141 158614163 -44471369 + AT_rich Low_complexity Low_complexity 1 22 0 1989 133 77 6 chr5 158614219 158614556 -44470976 + MER46B DNA MER2_type 1 236 0 362 278 78 0 chr5 158614815 158614930 -44470602 + L1ME2 LINE L1 6031 6154 -10 2161 115 7 0 chr5 158620780 158621075 -44464457 - AluSq SINE Alu -16 297 1 2281 127 0 0 chr5 158621502 158621802 -44463730 - AluSx SINE Alu -12 300 1 2089 136 0 3 chr5 158621898 158622200 -44463332 + AluSx SINE Alu 1 301 -11 243 290 140 0 chr5 158622352 158622459 -44463073 + L2 LINE L2 3192 3313 0 302 226 298 29 chr5 158626021 158626041 -44459491 - HAL1b LINE L1 0 1348 1335 2240 106 0 3 chr5 158626041 158626344 -44459188 + AluSx SINE Alu 9 310 -2 302 226 298 29 chr5 158626344 158626809 -44458723 - HAL1b LINE L1 -13 1335 732 2262 87 3 0 chr5 158626820 158627109 -44458423 - AluSq SINE Alu -23 290 1 25 0 0 0 chr5 158627117 158627142 -44458390 + AT_rich Low_complexity Low_complexity 1 25 0 886 277 182 31 chr5 158627169 158627937 -44457595 - HAL1 LINE L1 -109 2398 1515 340 122 0 204 chr5 158627986 158628084 -44457448 + MER20 DNA MER1_type 4 81 -138 485 286 112 36 chr5 158628123 158628515 -44457017 - HAL1 LINE L1 -1064 1443 1022 4977 161 40 16 chr5 158628520 158629549 -44455983 - L1MB7 LINE L1 -1 6183 5135 2403 82 0 3 chr5 158629549 158629843 -44455689 - AluSx SINE Alu -17 295 3 4977 161 40 16 chr5 158629843 158629861 -44455671 - L1MB7 LINE L1 -1049 5135 5119 680 326 92 27 chr5 158629856 158630335 -44455197 - HAL1 LINE L1 -1679 828 319 * 285 256 45 102 chr5 158630438 158630614 -44454918 - HAL1 LINE L1 -2318 189 24 359 303 180 0 chr5 158630625 158630836 -44454696 - HAL1b LINE L1 -640 708 460 948 249 122 33 chr5 158630873 158631234 -44454298 - HAL1b LINE L1 -703 645 253 398 326 70 32 chr5 158631280 158631611 -44453921 - L1MEd LINE L1 -5286 833 516 683 217 0 0 chr5 158631611 158631726 -44453806 + FLAM_A SINE Alu 1 115 -18 282 29 0 0 chr5 158631729 158631764 -44453768 + (CA)n Simple_repeat Simple_repeat 2 36 0 398 326 70 32 chr5 158631764 158631802 -44453730 - L1MEd LINE L1 -5604 515 446 1646 175 3 106 chr5 158632476 158632864 -44452668 - MER7A DNA MER2_type 0 346 1 21 36 0 0 chr5 158632960 158632988 -44452544 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 158633963 158633986 -44451546 + AT_rich Low_complexity Low_complexity 1 23 0 841 292 65 19 chr5 158634249 158634689 -44450843 + MLT1J LTR MaLR 1 492 -19 308 254 53 26 chr5 158634891 158635005 -44450527 + L1M4 LINE L1 3099 3215 -2931 693 252 87 85 chr5 158635047 158635496 -44450036 + HAL1 LINE L1 30 479 -2028 1049 283 45 50 chr5 158635600 158635921 -44449611 + MLT1I LTR MaLR 1 321 -88 1841 62 13 0 chr5 158635921 158636145 -44449387 - AluY SINE Alu -2 309 83 1049 283 45 50 chr5 158636145 158636226 -44449306 + MLT1I LTR MaLR 321 401 -8 2775 287 71 16 chr5 158636286 158637460 -44448072 + HAL1 LINE L1 632 1869 -638 573 266 171 20 chr5 158637546 158637903 -44447629 + HAL1 LINE L1 1690 2100 -407 331 285 95 15 chr5 158638035 158638172 -44447360 + HAL1 LINE L1 2356 2503 -4 254 218 77 26 chr5 158638501 158638579 -44446953 + L1P LINE L1 3587 3668 -2478 334 297 94 25 chr5 158642557 158642759 -44442773 - MIR SINE MIR -46 216 1 21 71 0 0 chr5 158643327 158643369 -44442163 + AT_rich Low_complexity Low_complexity 1 42 0 492 229 159 70 chr5 158643523 158643977 -44441555 + L1MC5 LINE L1 7436 7929 -32 267 231 13 39 chr5 158644277 158644355 -44441177 + MIR SINE MIR 103 178 -84 * 647 144 29 0 chr5 158644323 158644427 -44441105 - MIR SINE MIR -82 180 74 23 0 0 0 chr5 158647396 158647419 -44438113 + AT_rich Low_complexity Low_complexity 1 23 0 264 206 88 59 chr5 158647710 158647812 -44437720 - MIR SINE MIR -51 211 107 1441 204 7 4 chr5 158647817 158648091 -44437441 + AluJb SINE Alu 1 275 -37 333 0 0 0 chr5 158648543 158648580 -44436952 + (CA)n Simple_repeat Simple_repeat 2 38 0 428 219 76 17 chr5 158648593 158648712 -44436820 + L1MB8 LINE L1 5991 6116 -62 1794 167 27 3 chr5 158652340 158652640 -44432892 - AluJb SINE Alu -1 311 5 22 0 0 0 chr5 158652876 158652898 -44432634 + AT_rich Low_complexity Low_complexity 1 22 0 2123 78 11 7 chr5 158657085 158657414 -44428118 - AluSc SINE Alu 0 330 1 2097 120 3 7 chr5 158657912 158658232 -44427300 + AluSp SINE Alu 1 313 0 28 79 0 0 chr5 158662691 158662754 -44422778 + AT_rich Low_complexity Low_complexity 1 63 0 1315 281 132 43 chr5 158662788 158664053 -44421479 - HAL1 LINE L1 -144 2363 986 357 302 32 0 chr5 158664056 158664182 -44421350 - MIR SINE MIR -65 197 68 279 304 69 0 chr5 158664218 158664320 -44421212 + MIR SINE MIR 154 262 0 848 307 60 71 chr5 158664323 158665309 -44420223 - HAL1 LINE L1 -1514 993 19 2070 108 0 46 chr5 158669221 158669545 -44415987 - AluSg SINE Alu -1 309 1 1606 178 17 0 chr5 158669545 158669832 -44415700 - AluJb SINE Alu -1 311 20 1949 93 48 0 chr5 158670025 158670317 -44415215 - AluSq SINE Alu 0 307 3 2267 119 0 3 chr5 158670869 158671181 -44414351 + AluSx SINE Alu 1 311 -1 1442 241 141 52 chr5 158671235 158671435 -44414097 - HAL1 LINE L1 -137 2370 2189 2106 125 10 0 chr5 158671435 158671730 -44413802 - AluSx SINE Alu -14 298 1 1442 241 141 52 chr5 158671730 158672374 -44413158 - HAL1 LINE L1 -318 2189 1451 803 189 65 0 chr5 158672479 158672632 -44412900 - FAM SINE Alu -11 174 12 738 192 32 0 chr5 158672682 158672807 -44412725 + FLAM_C SINE Alu 2 130 -13 532 286 80 30 chr5 158672817 158673153 -44412379 - HAL1 LINE L1 -1201 1306 954 316 272 70 18 chr5 158673154 158673268 -44412264 - MIR SINE MIR -95 167 48 337 318 0 9 chr5 158673327 158673437 -44412095 + MIR SINE MIR 154 262 0 758 320 90 66 chr5 158673440 158674399 -44411133 - HAL1 LINE L1 -1514 993 12 306 314 21 14 chr5 158678701 158678841 -44406691 - MIR SINE MIR -121 141 1 598 241 132 56 chr5 158679580 158680028 -44405504 + L1MC5 LINE L1 7435 7916 -45 584 173 29 0 chr5 158680402 158680506 -44405026 - MIR SINE MIR -82 180 74 494 286 84 0 chr5 158684265 158684492 -44401040 + MER112 DNA MER1_type 8 253 -7 1628 149 3 55 chr5 158684884 158685173 -44400359 - AluJb SINE Alu -24 288 15 1077 155 34 115 chr5 158685369 158685545 -44399987 - AluJo SINE Alu 0 312 168 194 0 39 0 chr5 158685545 158685571 -44399961 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1077 155 34 115 chr5 158685571 158685690 -44399842 - AluJo SINE Alu -144 168 41 332 165 63 51 chr5 158685696 158685775 -44399757 - AluJb SINE Alu -156 146 67 753 346 122 34 chr5 158686430 158687411 -44398121 + L2 LINE L2 704 1771 -1543 308 75 0 0 chr5 158687461 158687501 -44398031 + Alu SINE Alu 253 292 -10 275 314 57 8 chr5 158687507 158687631 -44397901 + L2 LINE L2 1783 1912 -1402 505 303 58 5 chr5 158687909 158688097 -44397435 - MLT1J LTR MaLR -313 198 1 221 325 18 9 chr5 158688101 158688215 -44397317 + L2 LINE L2 1907 2021 -1293 243 0 0 0 chr5 158688368 158688395 -44397137 + (TA)n Simple_repeat Simple_repeat 2 28 0 233 155 0 56 chr5 158688416 158688487 -44397045 + (TA)n Simple_repeat Simple_repeat 1 67 0 514 331 101 49 chr5 158688488 158689043 -44396489 + L2 LINE L2 2159 2742 -572 204 315 112 11 chr5 158689228 158689317 -44396215 + L2 LINE L2 2976 3073 -199 605 282 81 14 chr5 158689348 158689557 -44395975 - MIR SINE MIR -36 226 4 191 418 0 0 chr5 158689634 158689701 -44395831 + L2 LINE L2 3128 3194 -78 22 0 0 0 chr5 158689716 158689738 -44395794 + AT_rich Low_complexity Low_complexity 1 22 0 432 262 70 31 chr5 158689907 158690136 -44395396 + L1MC5 LINE L1 7537 7774 -187 237 67 22 22 chr5 158693058 158693103 -44392429 + L1MC5 LINE L1 7640 7684 -277 1321 179 4 19 chr5 158693508 158693765 -44391767 - AluJo SINE Alu -14 298 46 1768 192 0 3 chr5 158693768 158694070 -44391462 - AluJb SINE Alu -11 301 1 548 313 103 22 chr5 158694975 158695754 -44389778 + L1ME2 LINE L1 4463 5304 -842 340 373 84 0 chr5 158695926 158696234 -44389298 + L1ME2 LINE L1 5557 5890 -274 8367 12 0 0 chr5 158696264 158697209 -44388323 - L1PA2 LINE L1 -3 6152 5207 2205 100 0 10 chr5 158697879 158698178 -44387354 - AluSp SINE Alu -17 296 1 326 0 0 0 chr5 158698221 158698259 -44387273 - AluY SINE Alu -9 292 255 700 294 52 43 chr5 158698282 158698966 -44386566 + L1MEd LINE L1 639 1368 -4862 307 388 0 11 chr5 158699290 158699473 -44386059 + L2 LINE L2 711 891 -2423 348 313 121 77 chr5 158699479 158700516 -44385016 + L2 LINE L2 2203 3272 0 339 25 0 0 chr5 158704572 158704612 -44380920 + (CA)n Simple_repeat Simple_repeat 2 41 0 692 210 0 0 chr5 158704614 158704738 -44380794 - FLAM_C SINE Alu -6 137 14 201 351 13 0 chr5 158704898 158704975 -44380557 + GA-rich Low_complexity Low_complexity 3 80 0 24 53 0 0 chr5 158705421 158705459 -44380073 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 158705658 158705679 -44379853 + AT_rich Low_complexity Low_complexity 1 21 0 190 224 69 17 chr5 158706193 158706251 -44379281 - MIR3 SINE MIR -135 73 13 1616 66 93 107 chr5 158709789 158710078 -44375454 - AluSq SINE Alu -28 285 1 506 259 93 39 chr5 158711222 158711398 -44374134 - L2 LINE L2 -4 3309 3119 1713 186 16 13 chr5 158711398 158711709 -44373823 + AluJo SINE Alu 1 312 0 506 259 93 39 chr5 158711709 158711737 -44373795 - L2 LINE L2 -194 3119 3094 253 257 181 9 chr5 158712037 158712142 -44373390 + L2 LINE L2 3191 3313 0 24 32 0 0 chr5 158715040 158715071 -44370461 + AT_rich Low_complexity Low_complexity 1 31 0 663 186 43 85 chr5 158715950 158716138 -44369394 + MLT1E2 LTR MaLR 13 192 -434 * 785 257 19 62 chr5 158716032 158716339 -44369193 + MLT2C1 LTR ERVL 104 397 0 3161 212 30 88 chr5 158716339 158717281 -44368251 + MLT1-int LTR MaLR 1 887 -484 1501 178 78 94 chr5 158717713 158718145 -44367387 + MER66A LTR ERV1 97 478 0 259 250 0 38 chr5 158720283 158720363 -44365169 - MLT1K LTR MaLR -2 586 510 226 217 0 0 chr5 158721960 158722006 -44363526 + (TG)n Simple_repeat Simple_repeat 2 47 0 1488 296 13 13 chr5 158722808 158723412 -44362120 - L1MEc LINE L1 -2384 3831 3228 415 176 15 0 chr5 158723432 158723500 -44362032 - AluJo SINE Alu -55 257 189 1892 118 37 4 chr5 158723502 158723774 -44361758 + AluSq SINE Alu 1 281 -32 1062 194 0 31 chr5 158723807 158724003 -44361529 - AluJo SINE Alu -112 200 11 2299 249 99 29 chr5 158724016 158724626 -44360906 - L1MEc LINE L1 -2976 3239 2673 5423 60 23 0 chr5 158724626 158725290 -44360242 - L1PA6 LINE L1 0 6154 5476 2299 249 99 29 chr5 158725290 158725909 -44359623 - L1MEc LINE L1 -3542 2673 1974 2445 102 0 0 chr5 158726405 158726710 -44358822 + AluSx SINE Alu 1 305 -7 2749 191 66 2 chr5 158727242 158727685 -44357847 + MLT2B2 LTR ERVL 1 479 -36 189 74 0 0 chr5 158727685 158727712 -44357820 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 2749 191 66 2 chr5 158727712 158727750 -44357782 + MLT2B2 LTR ERVL 479 513 -2 380 241 191 8 chr5 158728279 158728520 -44357012 - L1M4 LINE L1 -3069 3077 2793 930 341 113 34 chr5 158728929 158729208 -44356324 + MLT2E LTR ERVL 34 290 -338 2201 104 50 0 chr5 158729208 158729505 -44356027 + AluSx SINE Alu 1 312 0 930 341 113 34 chr5 158729505 158729756 -44355776 + MLT2E LTR ERVL 290 606 -22 670 192 0 0 chr5 158730072 158730176 -44355356 + FLAM_C SINE Alu 2 105 -38 23 33 0 0 chr5 158730507 158730537 -44354995 + AT_rich Low_complexity Low_complexity 1 30 0 2269 112 0 0 chr5 158730590 158730884 -44354648 + AluSx SINE Alu 1 294 -18 2139 107 0 14 chr5 158731306 158731618 -44353914 - AluSc SINE Alu 0 309 1 703 342 47 32 chr5 158731846 158732439 -44353093 - HERV16 LTR ERVL -4373 623 22 1119 294 30 47 chr5 158732446 158732851 -44352681 - LTR16C LTR ERVL 0 491 94 2572 119 8 0 chr5 158732876 158733228 -44352304 - THE1A LTR MaLR 0 355 1 347 356 43 32 chr5 158733936 158734301 -44351231 + ERVL LTR ERVL 300 688 -5042 585 328 66 27 chr5 158734351 158734714 -44350818 + ERVL LTR ERVL 774 1156 -4498 415 141 35 35 chr5 158734778 158734863 -44350669 - LTR45 LTR ERV1 0 525 441 2497 87 0 0 chr5 158734993 158735303 -44350229 + AluSx SINE Alu 1 310 -2 189 94 0 0 chr5 158735681 158735713 -44349819 + (A)n Simple_repeat Simple_repeat 1 32 0 1120 52 0 33 chr5 158735735 158735888 -44349644 - AluY SINE Alu -1 310 163 267 220 0 0 chr5 158735896 158735946 -44349586 + Zaphod DNA AcHobo 3982 4031 0 1370 303 44 52 chr5 158735961 158736453 -44349079 + ERVL LTR ERVL 2712 3199 -2565 2051 127 0 3 chr5 158736453 158736745 -44348787 + AluSx SINE Alu 2 292 -20 1370 303 44 52 chr5 158736745 158736890 -44348642 + ERVL LTR ERVL 3199 3344 -2420 1817 215 151 10 chr5 158736944 158737461 -44348071 + L1MC4a LINE L1 7214 7803 -5 798 164 103 7 chr5 158737484 158737630 -44347902 + MER21A LTR ERV1 414 573 -358 1030 149 13 0 chr5 158737641 158737795 -44347737 + MER21B-int LTR ERV1 3645 3800 -2958 941 155 23 46 chr5 158737793 158737967 -44347565 + MER21B-int LTR ERV1 2268 2437 -1754 * 3301 139 90 29 chr5 158737965 158738577 -44346955 + MER21B-int LTR ERV1 3501 4149 -42 2904 163 51 26 chr5 158738641 158739149 -44346383 + MER21B LTR ERV1 1 521 -342 1801 154 34 13 chr5 158739173 158739471 -44346061 - AluJb SINE Alu -8 304 1 1527 288 36 2 chr5 158739484 158739904 -44345628 + LTR16A LTR ERVL 3 436 -14 3401 278 88 16 chr5 158739915 158741000 -44344532 + HERV16 LTR ERVL 2 1165 -3831 2156 199 113 26 chr5 158741011 158741479 -44344053 - MLT2B2 LTR ERVL -6 509 1 414 344 0 0 chr5 158741479 158741607 -44343925 + HERV16 LTR ERVL 1186 1313 -3683 2579 68 3 0 chr5 158741608 158741918 -44343614 + AluY SINE Alu 1 311 0 395 118 0 15 chr5 158741918 158741986 -44343546 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 1101 60 24 12 chr5 158742001 158742167 -44343365 + (GAAA)n Simple_repeat Simple_repeat 1 168 0 1003 314 31 31 chr5 158742169 158742570 -44342962 + HERV16 LTR ERVL 1305 1774 -3222 2032 63 86 19 chr5 158742570 158742839 -44342693 + AluSp SINE Alu 1 287 -26 1003 314 31 31 chr5 158742839 158742970 -44342562 + HERV16 LTR ERVL 1774 1903 -3093 1110 68 0 0 chr5 158742971 158743103 -44342429 + AluYb8 SINE Alu 1 132 -186 969 275 64 13 chr5 158743120 158743418 -44342114 + HERV16 LTR ERVL 1894 2206 -2790 1136 336 75 39 chr5 158743462 158744384 -44341148 + HERV16 LTR ERVL 2282 3169 -2316 2817 122 49 2 chr5 158744384 158744793 -44340739 + MSTA LTR MaLR 1 428 0 1136 336 75 39 chr5 158744793 158745642 -44339890 + HERV16 LTR ERVL 3169 4156 -1329 2608 165 20 11 chr5 158745673 158746127 -44339405 + MER88 LTR ERVL 1 458 -6 276 283 30 54 chr5 158746381 158746547 -44338985 + HERV16 LTR ERVL 4535 4696 -300 734 260 104 88 chr5 158746874 158747075 -44338457 + LTR16A LTR ERVL 1 197 -253 1757 159 3 14 chr5 158747075 158747358 -44338174 + AluJb SINE Alu 1 280 -32 734 260 104 88 chr5 158747358 158747599 -44337933 + LTR16A LTR ERVL 197 450 0 1169 312 40 67 chr5 158747601 158747743 -44337789 + ERVL LTR ERVL 3341 3485 -2279 782 194 0 8 chr5 158747743 158747872 -44337660 - FLAM_A SINE Alu -5 128 1 1169 312 40 67 chr5 158747872 158748277 -44337255 + ERVL LTR ERVL 3485 3865 -1899 1839 176 7 104 chr5 158748277 158748472 -44337060 - MLT1B LTR MaLR 0 390 258 1757 167 30 0 chr5 158748472 158748771 -44336761 - AluJb SINE Alu -4 308 1 1839 176 7 104 chr5 158748771 158749007 -44336525 - MLT1B LTR MaLR -132 258 1 1169 312 40 67 chr5 158749007 158749225 -44336307 + ERVL LTR ERVL 3865 4087 -1677 333 222 0 0 chr5 158749255 158749327 -44336205 - MIR SINE MIR -10 252 181 509 263 100 6 chr5 158749332 158749492 -44336040 + ERVL LTR ERVL 4103 4277 -1487 463 233 19 0 chr5 158749537 158749640 -44335892 + ERVL LTR ERVL 4326 4430 -1224 2543 116 3 5 chr5 158749643 158750015 -44335517 - L1MA4 LINE L1 -442 5858 5488 1206 159 4 69 chr5 158751185 158751332 -44334200 + AluJo SINE Alu 1 129 -183 2420 62 3 40 chr5 158751332 158751654 -44333878 + AluY SINE Alu 1 310 -1 1206 159 4 69 chr5 158751654 158751738 -44333794 + AluJo SINE Alu 129 217 -95 862 232 27 80 chr5 158752244 158752362 -44333170 - L1ME3A LINE L1 -1 6165 6042 2018 102 84 0 chr5 158752362 158752647 -44332885 + AluSx SINE Alu 1 309 -3 862 232 27 80 chr5 158752647 158753041 -44332491 - L1ME3A LINE L1 -124 6042 5688 365 182 82 9 chr5 158753033 158753143 -44332389 - L1ME3A LINE L1 -1461 4685 4568 * 1780 164 54 0 chr5 158753299 158753597 -44331935 - MSTB1 LTR MaLR -118 314 1 1009 306 33 20 chr5 158753600 158753998 -44331534 + ERVL LTR ERVL 1726 2128 -2868 2121 83 47 0 chr5 158754027 158754303 -44331229 + AluSp SINE Alu 1 289 -24 215 31 31 0 chr5 158754306 158754338 -44331194 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 738 186 0 16 chr5 158754341 158754470 -44331062 + MER68 LTR ERV1 2 128 -434 8440 171 70 36 chr5 158754471 158756021 -44329511 + ERVL LTR ERVL 1265 2879 -158 2335 96 7 3 chr5 158756021 158756323 -44329209 - AluSq SINE Alu -7 306 4 8440 171 70 36 chr5 158756323 158756475 -44329057 + ERVL LTR ERVL 2879 3024 -13 3049 209 15 2 chr5 158756475 158757024 -44328508 + MER68 LTR ERV1 6 561 -1 4061 318 89 56 chr5 158757073 158758149 -44327383 + ERVL LTR ERVL 2260 3299 -2465 2339 147 76 27 chr5 158758149 158758557 -44326975 - MSTA LTR MaLR 0 428 1 4061 318 89 56 chr5 158758557 158760368 -44325164 + ERVL LTR ERVL 3299 5241 -523 288 111 0 0 chr5 158760513 158760558 -44324974 + (TC)n Simple_repeat Simple_repeat 1 45 0 234 150 0 0 chr5 158760557 158760597 -44324935 + (CA)n Simple_repeat Simple_repeat 1 40 0 * 1620 162 68 7 chr5 158761233 158761511 -44324021 - AluJb SINE Alu -17 295 1 1891 160 0 3 chr5 158761638 158761957 -44323575 + AluSx SINE Alu 1 318 0 1702 170 28 13 chr5 158762097 158762414 -44323118 + L1MB4 LINE L1 5859 6180 0 1235 180 0 5 chr5 158762440 158762646 -44322886 - AluJo SINE Alu -23 289 85 322 243 28 28 chr5 158762741 158762885 -44322647 + L1MCa LINE L1 1729 1872 -4554 676 266 74 5 chr5 158762891 158763094 -44322438 - MIR SINE MIR -1 261 45 2141 108 44 0 chr5 158763236 158763531 -44322001 + AluSx SINE Alu 1 308 -4 2302 103 0 0 chr5 158763825 158764127 -44321405 + AluSc SINE Alu 1 302 -7 3622 157 72 69 chr5 158764914 158765706 -44319826 - LTR25 LTR ERV1 0 794 1 2088 93 18 4 chr5 158766429 158766709 -44318823 + AluSx SINE Alu 27 310 -2 2182 116 0 0 chr5 158768681 158768975 -44316557 + AluSq SINE Alu 1 294 -19 221 171 0 0 chr5 158768976 158769017 -44316515 + (TA)n Simple_repeat Simple_repeat 2 42 0 189 0 0 0 chr5 158769017 158769038 -44316494 + (GA)n Simple_repeat Simple_repeat 1 21 0 2339 93 0 0 chr5 158769131 158769431 -44316101 + AluSx SINE Alu 1 300 -12 1816 130 23 3 chr5 158771163 158771463 -44314069 + AluJo SINE Alu 1 306 -6 1777 150 19 32 chr5 158771570 158771884 -44313648 - AluJo SINE Alu -2 310 1 726 183 0 38 chr5 158772011 158772142 -44313390 + FLAM_C SINE Alu 2 127 -16 4015 148 9 9 chr5 158772159 158772793 -44312739 + MER41B LTR ERV1 1 634 -1 3867 151 6 34 chr5 158773212 158773376 -44312156 + L1PA16 LINE L1 5525 5692 -474 1421 188 62 4 chr5 158773376 158773652 -44311880 + AluJo SINE Alu 2 293 -19 3867 151 6 34 chr5 158773652 158774143 -44311389 + L1PA16 LINE L1 5692 6162 -4 276 138 185 15 chr5 158774357 158774422 -44311110 - HAL1 LINE L1 -1620 887 812 22 0 0 0 chr5 158774442 158774464 -44311068 + AT_rich Low_complexity Low_complexity 1 22 0 709 288 102 85 chr5 158774464 158775208 -44310324 - HAL1 LINE L1 -1685 822 66 1706 191 4 0 chr5 158775378 158775651 -44309881 - AluJb SINE Alu -38 274 1 27 0 0 0 chr5 158775969 158775996 -44309536 + AT_rich Low_complexity Low_complexity 1 27 0 257 91 0 0 chr5 158776099 158776132 -44309400 + Alu SINE Alu 240 272 -28 4111 178 96 21 chr5 158776252 158777055 -44308477 - MER21B LTR ERV1 0 863 1 464 190 0 52 chr5 158777273 158777389 -44308143 - MLT1F LTR MaLR -1 541 432 6759 37 14 2 chr5 158777411 158778214 -44307318 - L1PA5 LINE L1 0 6154 5343 296 197 66 0 chr5 158778220 158778281 -44307251 - MLT1F-int LTR MaLR -1298 73 9 2789 200 28 15 chr5 158778294 158778829 -44306703 - MLT1F LTR MaLR 0 542 1 2178 121 0 3 chr5 158779656 158779954 -44305578 - AluSx SINE Alu -15 297 1 2142 145 0 0 chr5 158780280 158780591 -44304941 - AluSx SINE Alu -1 311 1 257 352 63 14 chr5 158781357 158781499 -44304033 - L2 LINE L2 -246 3067 2919 697 239 29 49 chr5 158781758 158781963 -44303569 - MIR SINE MIR -11 251 51 207 281 36 137 chr5 158782117 158782206 -44303326 + L2 LINE L2 3146 3218 -54 243 0 0 0 chr5 158782206 158782233 -44303299 + (CA)n Simple_repeat Simple_repeat 1 27 0 207 281 36 137 chr5 158782233 158782282 -44303250 + L2 LINE L2 3218 3270 -2 235 281 133 62 chr5 158782342 158782470 -44303062 - L2 LINE L2 -218 3054 2918 419 342 170 52 chr5 158782529 158782961 -44302571 - L2 LINE L2 -468 2846 2324 2070 119 10 10 chr5 158782961 158783255 -44302277 - AluSq SINE Alu -19 294 1 419 342 170 52 chr5 158783255 158783416 -44302116 - L2 LINE L2 -990 2324 2183 2355 85 0 0 chr5 158783748 158784042 -44301490 + AluSc SINE Alu 1 294 -15 2231 111 3 0 chr5 158784200 158784497 -44301035 + AluSq SINE Alu 1 298 -15 2339 71 0 17 chr5 158784499 158784796 -44300736 + AluY SINE Alu 1 292 -19 1995 144 3 0 chr5 158788203 158788501 -44297031 - AluSx SINE Alu -13 299 1 297 252 122 9 chr5 158789032 158789139 -44296393 + L2 LINE L2 3194 3312 -1 207 319 77 0 chr5 158789459 158789550 -44295982 - L3 LINE CR1 -1336 241 144 2303 93 0 32 chr5 158789939 158790074 -44295458 + AluSq SINE Alu 2 140 -173 2454 78 3 0 chr5 158790074 158790382 -44295150 + AluY SINE Alu 1 309 -2 2303 93 0 32 chr5 158790382 158790559 -44294973 + AluSq SINE Alu 140 304 -9 1493 154 58 62 chr5 158791232 158791557 -44293975 - MER33 DNA MER1_type 0 324 1 1166 145 34 0 chr5 158791898 158792077 -44293455 + MER20 DNA MER1_type 35 219 0 287 278 86 20 chr5 158792103 158792254 -44293278 - MLT1L LTR MaLR -414 201 41 2190 136 0 0 chr5 158792610 158792912 -44292620 + AluSx SINE Alu 1 302 -10 926 159 25 6 chr5 158793977 158794134 -44291398 + FAM SINE Alu 16 175 -10 846 122 32 0 chr5 158795780 158795903 -44289629 - AluJb SINE Alu -178 134 8 201 74 0 0 chr5 158797404 158797431 -44288101 + (A)n Simple_repeat Simple_repeat 1 27 0 746 203 98 0 chr5 158800639 158800782 -44284750 - FRAM SINE Alu -7 159 3 861 178 31 2 chr5 158801277 158801401 -44284131 + AluJb SINE Alu 1 120 -192 261 57 0 0 chr5 158801401 158801436 -44284096 + (CGGGG)n Simple_repeat Simple_repeat 2 36 0 861 178 31 2 chr5 158801436 158801561 -44283971 + AluJb SINE Alu 120 306 -6 713 211 16 0 chr5 158803170 158803342 -44282190 + FLAM_A SINE Alu 1 174 0 5053 164 24 28 chr5 158803513 158804712 -44280820 + L1MB3 LINE L1 4966 6147 -36 322 327 77 77 chr5 158804836 158805252 -44280280 + L2 LINE L2 2855 3270 -2 193 380 114 24 chr5 158808567 158808733 -44276799 + MIR3 SINE MIR 21 201 -7 295 322 161 31 chr5 158809897 158810158 -44275374 + L2 LINE L2 2974 3268 -4 456 285 175 20 chr5 158813484 158813838 -44271694 + MLT1I LTR MaLR 1 409 0 662 199 13 0 chr5 158813932 158814083 -44271449 + CT-rich Low_complexity Low_complexity 3 155 0 1625 158 36 7 chr5 158814085 158814388 -44271144 - AluJb SINE Alu 0 312 1 2004 128 3 0 chr5 158814439 158814735 -44270797 + AluSx SINE Alu 1 297 -15 391 198 16 11 chr5 158815245 158815346 -44270186 + FLAM_A SINE Alu 53 125 -8 1587 154 29 4 chr5 158816017 158816297 -44269235 - AluSx SINE Alu -25 287 1 22 0 0 0 chr5 158816639 158816661 -44268871 + AT_rich Low_complexity Low_complexity 1 22 0 1789 144 13 3 chr5 158819641 158819940 -44265592 + AluSx SINE Alu 1 302 -10 205 134 24 85 chr5 158820267 158820349 -44265183 + (TTAA)n Simple_repeat Simple_repeat 2 78 0 295 302 66 9 chr5 158820514 158820726 -44264806 - L1ME LINE L1 -334 5787 5564 1790 144 3 3 chr5 158824842 158825154 -44260378 + AluSx SINE Alu 2 313 0 454 240 101 34 chr5 158826439 158826647 -44258885 + L1MC4a LINE L1 5785 6006 -1802 21 0 0 0 chr5 158833807 158833828 -44251704 + AT_rich Low_complexity Low_complexity 1 21 0 2305 43 4 0 chr5 158834190 158834508 -44251024 + AluY SINE Alu 1 319 0 310 229 94 31 chr5 158835272 158835368 -44250164 - L1MCa LINE L1 -4359 2067 1966 27 0 0 0 chr5 158836169 158836196 -44249336 + AT_rich Low_complexity Low_complexity 1 27 0 727 175 32 0 chr5 158836322 158836448 -44249084 + FLAM_C SINE Alu 1 130 -3 887 161 0 0 chr5 158840320 158840463 -44245069 + FRAM SINE Alu 11 153 -23 2741 7 0 3 chr5 158843610 158843920 -44241612 - AluYb8 SINE Alu -9 309 1 1419 170 38 38 chr5 158844263 158844552 -44240980 + AluJo SINE Alu 7 295 -17 801 78 35 0 chr5 158844845 158844961 -44240571 + LTR56 LTR ERV1 320 439 -6 2197 87 0 0 chr5 158845176 158845462 -44240070 + AluSg SINE Alu 1 286 -24 238 347 94 40 chr5 158845540 158845964 -44239568 + L3 LINE CR1 1129 1575 -2 2198 110 7 0 chr5 158846823 158847133 -44238399 - AluSx SINE Alu 0 312 1 182 274 51 134 chr5 158848650 158848750 -44236782 + MIR3 SINE MIR 31 115 -93 2348 74 6 0 chr5 158848750 158849061 -44236471 - AluSp SINE Alu 0 313 1 182 274 51 134 chr5 158849061 158849117 -44236415 + MIR3 SINE MIR 115 174 -34 509 272 16 0 chr5 158853330 158853455 -44232077 + FLAM_A SINE Alu 1 127 -6 346 67 0 0 chr5 158853529 158853574 -44231958 - Alu SINE Alu -8 293 249 249 33 0 0 chr5 158857792 158857822 -44227710 + (TG)n Simple_repeat Simple_repeat 1 30 0 1087 163 5 0 chr5 158858237 158858433 -44227099 - AluJo SINE Alu -3 309 113 444 19 0 0 chr5 158862472 158862525 -44223007 + (TG)n Simple_repeat Simple_repeat 2 54 0 815 203 0 6 chr5 158863103 158863261 -44222271 + FRAM SINE Alu 1 154 -22 2269 84 0 3 chr5 158863270 158863567 -44221965 + AluSx SINE Alu 1 296 -16 218 333 70 9 chr5 158864479 158864593 -44220939 + L2 LINE L2 3192 3312 -1 2165 93 7 0 chr5 158867995 158868315 -44217217 + AluSq SINE Alu 1 322 0 25 51 0 0 chr5 158869114 158869153 -44216379 + AT_rich Low_complexity Low_complexity 1 39 0 24 91 0 0 chr5 158869220 158869286 -44216246 + AT_rich Low_complexity Low_complexity 1 66 0 1636 111 0 159 chr5 158872341 158872711 -44212821 - AluYa5 SINE Alu 0 311 1 720 187 0 22 chr5 158873006 158873145 -44212387 - AluJo SINE Alu -15 297 162 404 188 200 0 chr5 158873164 158873249 -44212283 - AluJo SINE Alu -199 103 2 462 166 103 28 chr5 158874555 158874700 -44210832 + L1MC5 LINE L1 7754 7909 -52 21 0 0 0 chr5 158875158 158875179 -44210353 + GC_rich Low_complexity Low_complexity 1 21 0 1960 105 14 7 chr5 158877777 158878072 -44207460 - AluSg SINE Alu -2 308 12 1452 164 3 48 chr5 158878224 158878534 -44206998 + AluJb SINE Alu 4 299 -13 1375 150 93 0 chr5 158878556 158878803 -44206729 + AluJo SINE Alu 23 292 -20 288 0 0 0 chr5 158882674 158882706 -44202826 + (T)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr5 158884008 158884036 -44201496 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 158884815 158884836 -44200696 + GC_rich Low_complexity Low_complexity 1 21 0 2307 58 3 0 chr5 158895794 158896087 -44189445 - AluY SINE Alu -17 294 1 324 0 0 0 chr5 158896103 158896139 -44189393 + (CA)n Simple_repeat Simple_repeat 2 37 0 621 191 0 73 chr5 158896311 158896447 -44189085 - FLAM_A SINE Alu -7 126 1 27 0 0 0 chr5 158896585 158896612 -44188920 + AT_rich Low_complexity Low_complexity 1 27 0 1235 170 105 18 chr5 158900135 158900284 -44185248 - AluJo SINE Alu -11 301 166 441 54 0 0 chr5 158900284 158900340 -44185192 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 1235 170 105 18 chr5 158900340 158900467 -44185065 - AluJo SINE Alu -146 166 1 2318 86 0 3 chr5 158900487 158900789 -44184743 + AluSp SINE Alu 1 301 -12 1089 213 55 3 chr5 158900790 158901081 -44184451 - L1MC4 LINE L1 -801 7241 6936 3351 98 0 5 chr5 158901267 158901706 -44183826 + MER9 LTR ERVK 1 437 -74 21 0 0 0 chr5 158901706 158901727 -44183805 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr5 158901853 158901900 -44183632 + AT_rich Low_complexity Low_complexity 1 47 0 311 260 62 68 chr5 158903419 158903537 -44181995 + MIR SINE MIR 63 186 -76 2058 114 0 17 chr5 158904675 158904974 -44180558 - AluSc SINE Alu -15 294 1 391 336 17 0 chr5 158905474 158905593 -44179939 - L1MC4 LINE L1 -1308 6734 6614 2003 102 0 18 chr5 158905614 158905899 -44179633 - AluSx SINE Alu -32 280 1 1081 87 13 0 chr5 158905990 158906139 -44179393 + AluSg/x SINE Alu 147 297 -15 1978 101 75 0 chr5 158907120 158907388 -44178144 + AluSg SINE Alu 1 288 -22 1591 189 0 18 chr5 158910154 158910439 -44175093 + AluJb SINE Alu 23 302 -10 2532 80 3 0 chr5 158911092 158911404 -44174128 - AluSp SINE Alu 0 313 1 678 228 98 63 chr5 158911526 158911780 -44173752 - L1M4 LINE L1 -1150 4996 4734 895 213 23 61 chr5 158911790 158912100 -44173432 - L1M4 LINE L1 -1519 4627 4330 600 329 73 58 chr5 158912309 158913090 -44172442 - L2 LINE L2 0 3272 2482 276 246 56 87 chr5 158913080 158913206 -44172326 + L2 LINE L2 3192 3313 0 * 322 356 72 0 chr5 158913226 158913406 -44172126 - L2 LINE L2 -842 2472 2280 2206 87 31 3 chr5 158913413 158913700 -44171832 - AluSg SINE Alu -15 295 1 2269 94 10 3 chr5 158914061 158914369 -44171163 - AluSx SINE Alu 0 312 3 497 159 80 18 chr5 158914598 158914711 -44170821 + L1ME2 LINE L1 6037 6156 -8 2395 103 0 6 chr5 158914737 158915048 -44170484 + AluSq SINE Alu 1 309 -4 703 224 132 66 chr5 158915273 158915592 -44169940 - L1MC4a LINE L1 -1618 6190 5893 2379 32 0 18 chr5 158915592 158915871 -44169661 + AluY SINE Alu 1 274 -37 183 42 0 0 chr5 158915877 158915901 -44169631 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 703 224 132 66 chr5 158915901 158915984 -44169548 - L1MC4a LINE L1 -1919 5889 5754 462 217 33 50 chr5 158915996 158916116 -44169416 - L1MC4a LINE L1 -2109 5699 5582 425 191 39 1 chr5 158916129 158916218 -44169314 - L1MC4 LINE L1 0 8042 6265 2072 113 62 0 chr5 158916258 158916549 -44168983 + AluSx SINE Alu 1 309 -3 183 129 0 0 chr5 158916598 158916629 -44168903 + (TATG)n Simple_repeat Simple_repeat 3 33 0 1210 226 38 45 chr5 158916668 158916940 -44168592 - L1MC4 LINE L1 -135 7907 7638 2148 114 16 36 chr5 158916940 158917246 -44168286 - AluSx SINE Alu -12 300 1 1210 226 38 45 chr5 158917246 158917393 -44168139 - L1MC4 LINE L1 -404 7638 7491 2209 106 0 0 chr5 158917404 158917718 -44167814 - AluSq SINE Alu 0 316 3 33 0 0 0 chr5 158917730 158917763 -44167769 + AT_rich Low_complexity Low_complexity 1 33 0 2283 97 0 17 chr5 158917763 158918061 -44167471 - AluSg SINE Alu -17 293 1 1575 201 97 104 chr5 158918097 158918531 -44167001 - MLT1E LTR MaLR 0 593 137 1787 176 10 0 chr5 158918533 158918822 -44166710 + AluSx SINE Alu 1 292 -20 261 98 0 0 chr5 158918832 158918873 -44166659 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 403 221 12 12 chr5 158918881 158918967 -44166565 - MLT1E LTR MaLR -418 149 64 2209 208 87 45 chr5 158918991 158919588 -44165944 - L1MC4a LINE L1 -743 7065 6444 282 190 35 0 chr5 158919588 158919646 -44165886 + Alu SINE Alu 241 300 -2 318 148 0 0 chr5 158919647 158919701 -44165831 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 377 233 12 12 chr5 158919708 158919794 -44165738 - MLT1F1 LTR MaLR -418 149 64 288 123 0 108 chr5 158919794 158919859 -44165673 - L1MC4 LINE L1 -881 7161 7104 980 167 187 96 chr5 158919882 158920035 -44165497 - L1MC4a LINE L1 -1463 6345 6207 1584 173 48 4 chr5 158920035 158920217 -44165315 - AluJb SINE Alu 0 312 111 246 32 0 0 chr5 158920217 158920248 -44165284 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1584 173 48 4 chr5 158920248 158920365 -44165167 - AluJb SINE Alu -201 111 1 980 167 187 96 chr5 158920365 158920617 -44164915 - L1MC4a LINE L1 -1601 6207 5902 5106 161 50 31 chr5 158920617 158921339 -44164193 + Tigger6a DNA MER2_type 2 708 -889 2286 108 3 0 chr5 158921339 158921635 -44163897 - AluSp SINE Alu -12 301 5 5106 161 50 31 chr5 158921635 158921730 -44163802 + Tigger6a DNA MER2_type 708 800 -797 2655 38 0 16 chr5 158921730 158922043 -44163489 - AluY SINE Alu -1 310 3 5106 161 50 31 chr5 158922043 158922238 -44163294 + Tigger6a DNA MER2_type 800 1035 -48 3681 94 36 20 chr5 158922261 158922785 -44162747 - LTR9B LTR ERV1 -83 561 26 2338 41 0 7 chr5 158922785 158923108 -44162424 - AluY SINE Alu 0 311 23 3681 94 36 20 chr5 158923108 158923135 -44162397 - LTR9B LTR ERV1 -618 26 1 12290 106 17 18 chr5 158923136 158923616 -44161916 - HUERS-P3b LTR ERV1 -7 7411 6932 2215 74 14 3 chr5 158923616 158923925 -44161607 + AluSq SINE Alu 1 312 0 12290 106 17 18 chr5 158923925 158925155 -44160377 - HUERS-P3b LTR ERV1 -486 6932 5700 1286 142 15 0 chr5 158925175 158925372 -44160160 - LTR9B LTR ERV1 0 644 445 1157 135 6 0 chr5 158925499 158925669 -44159863 - AluSg/x SINE Alu -7 305 135 1812 167 3 3 chr5 158925679 158925966 -44159566 - AluJb SINE Alu -25 287 1 3560 219 37 27 chr5 158925977 158926861 -44158671 - L1ME2 LINE L1 -9 6224 5332 1203 105 0 0 chr5 158926863 158927016 -44158516 + AluSg/x SINE Alu 135 287 -25 1758 217 13 42 chr5 158927061 158927535 -44157997 - L1ME2 LINE L1 -874 5341 4882 342 194 20 10 chr5 158927657 158927755 -44157777 + (TA)n Simple_repeat Simple_repeat 1 99 0 745 93 0 0 chr5 158927757 158927854 -44157678 - L1PB2 LINE L1 -273 5878 5782 365 185 0 12 chr5 158927854 158927935 -44157597 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 3658 113 4 2 chr5 158927935 158928502 -44157030 - L1PB2 LINE L1 -363 5791 5224 1290 197 21 49 chr5 158928506 158928597 -44156935 - L1ME2 LINE L1 -3180 3035 2943 2090 102 58 17 chr5 158928597 158928754 -44156778 - AluSq SINE Alu -6 307 158 2394 96 3 0 chr5 158928754 158929056 -44156476 - AluSp SINE Alu -10 303 1 2090 102 58 17 chr5 158929056 158929193 -44156339 - AluSq SINE Alu -155 158 1 1290 197 21 49 chr5 158929193 158929487 -44156045 - L1ME2 LINE L1 -3272 2943 2661 * 1819 294 74 37 chr5 158929461 158930372 -44155160 - L1ME2 LINE L1 -5274 1122 165 2450 65 16 10 chr5 158930372 158930679 -44154853 - AluY SINE Alu -2 309 1 1819 294 74 37 chr5 158930679 158930817 -44154715 - L1ME2 LINE L1 -6231 165 34 1592 215 67 71 chr5 158930817 158930919 -44154613 - L1MC4a LINE L1 -1918 5890 5789 2411 95 3 0 chr5 158930919 158931224 -44154308 + AluSx SINE Alu 3 308 -4 1592 215 67 71 chr5 158931224 158931336 -44154196 - L1MC4a LINE L1 -2019 5789 5678 222 62 0 0 chr5 158931336 158931368 -44154164 + (TA)n Simple_repeat Simple_repeat 2 33 0 1592 215 67 71 chr5 158931368 158931675 -44153857 - L1MC4a LINE L1 -2130 5678 5368 1831 161 0 14 chr5 158931675 158931967 -44153565 - AluJo SINE Alu -16 296 9 1592 215 67 71 chr5 158931967 158932038 -44153494 - L1MC4a LINE L1 -2440 5368 5298 8230 112 26 38 chr5 158932080 158932774 -44152758 - HSMAR2 DNA Mariner -1 1301 600 2315 93 0 0 chr5 158932774 158933065 -44152467 + AluY SINE Alu 1 291 -20 8230 112 26 38 chr5 158933065 158933103 -44152429 - HSMAR2 DNA Mariner -702 600 563 972 189 0 0 chr5 158933103 158933267 -44152265 - FRAM SINE Alu -1 165 2 8230 112 26 38 chr5 158933267 158933850 -44151682 - HSMAR2 DNA Mariner -739 563 1 488 311 24 52 chr5 158933850 158933984 -44151548 - L1MC4a LINE L1 -878 5268 5132 2278 119 0 0 chr5 158933984 158934286 -44151246 - AluSx SINE Alu -10 302 1 488 311 24 52 chr5 158934286 158934572 -44150960 - L1MC4a LINE L1 -1014 5132 4860 1839 158 14 3 chr5 158934600 158934892 -44150640 - AluJb SINE Alu -17 295 1 2358 107 0 16 chr5 158934976 158935294 -44150238 + AluSq SINE Alu 1 313 0 2512 49 0 0 chr5 158935518 158935822 -44149710 + AluY SINE Alu 1 304 0 1948 145 7 7 chr5 158935929 158936226 -44149306 + AluJo SINE Alu 2 298 -14 2340 96 0 0 chr5 158936228 158936551 -44148981 + AluSc SINE Alu 1 323 0 517 266 7 0 chr5 158936595 158936734 -44148798 + L1ME1 LINE L1 5586 5725 -2083 1999 145 7 0 chr5 158936782 158937071 -44148461 + AluSx SINE Alu 1 291 -21 603 183 5 193 chr5 158937501 158937631 -44147901 + MER45A DNA AcHobo 1 154 -1427 1648 141 31 91 chr5 158937631 158937950 -44147582 - AluJo SINE Alu -12 300 1 603 183 5 193 chr5 158937950 158937980 -44147552 + MER45A DNA AcHobo 154 115 -1466 2186 109 3 10 chr5 158937980 158938284 -44147248 - AluSx SINE Alu -10 302 1 603 183 5 193 chr5 158938284 158938335 -44147197 + MER45A DNA AcHobo 114 173 -5 388 326 105 26 chr5 158938345 158938688 -44146844 - L2 LINE L2 -574 2740 2371 731 252 153 8 chr5 158938699 158938961 -44146571 + L1ME1 LINE L1 5847 6146 -20 256 320 39 20 chr5 158939014 158939167 -44146365 - MIR SINE MIR -104 158 3 2276 89 3 0 chr5 158939193 158939486 -44146046 + AluY SINE Alu 1 294 -17 2262 98 23 3 chr5 158939637 158939982 -44145550 + AluSp SINE Alu 1 351 0 515 312 31 106 chr5 158940253 158940670 -44144862 - L2 LINE L2 -36 3236 2851 942 193 0 6 chr5 158940856 158941048 -44144484 + FRAM SINE Alu 1 55 0 411 262 215 0 chr5 158941223 158941372 -44144160 - MER5A DNA MER1_type 0 189 9 198 86 29 0 chr5 158941739 158941774 -44143758 - MIR SINE MIR -9 253 218 283 178 129 10 chr5 158946088 158946189 -44139343 - L1ME4a LINE L1 -12 6109 5997 1692 180 3 39 chr5 158946249 158946560 -44138972 + 7SLRNA srpRNA srpRNA 1 300 -20 213 39 0 0 chr5 158946561 158946587 -44138945 + (CAA)n Simple_repeat Simple_repeat 2 27 0 471 283 102 17 chr5 158946901 158947078 -44138454 + MIR SINE MIR 63 254 -8 1589 174 0 40 chr5 158947083 158947359 -44138173 + AluJb SINE Alu 29 293 -19 878 174 24 0 chr5 158947565 158947732 -44137800 + MER5B DNA MER1_type 6 176 -2 1810 132 0 45 chr5 158947734 158948021 -44137511 + AluSg SINE Alu 37 310 0 611 184 0 83 chr5 158948288 158948456 -44137076 + L1MB8 LINE L1 6013 6166 -12 731 196 0 0 chr5 158948469 158948602 -44136930 + AluJo SINE Alu 1 133 -169 1895 53 145 0 chr5 158948605 158948867 -44136665 + AluSg SINE Alu 1 300 0 842 210 0 30 chr5 158948872 158949039 -44136493 + AluJo SINE Alu 137 298 -4 411 284 142 0 chr5 158949185 158949347 -44136185 + MIR SINE MIR 72 256 -6 213 324 24 80 chr5 158949432 158949645 -44135887 - L2 LINE L2 -107 3165 2965 2045 122 0 43 chr5 158949723 158950027 -44135505 + AluSx SINE Alu 1 291 -21 536 315 69 58 chr5 158950053 158950501 -44135031 - L2 LINE L2 -465 2849 2397 237 33 0 0 chr5 158950573 158950603 -44134929 + (TG)n Simple_repeat Simple_repeat 2 31 0 379 247 216 16 chr5 158960096 158960286 -44125246 - MIR SINE MIR -17 245 18 204 289 11 64 chr5 158962334 158962521 -44123011 + CT-rich Low_complexity Low_complexity 3 179 0 * 338 244 0 83 chr5 158962384 158962577 -44122955 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 222 246 31 0 chr5 158962664 158962729 -44122803 + CT-rich Low_complexity Low_complexity 5 71 0 341 144 24 60 chr5 158962805 158962972 -44122560 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 447 247 32 138 chr5 158963668 158963837 -44121695 - L2 LINE L2 -1 3271 3142 1788 108 12 12 chr5 158963837 158964077 -44121455 + AluSq SINE Alu 1 240 -73 447 247 32 138 chr5 158964077 158964190 -44121342 - L2 LINE L2 -130 3142 3019 2089 125 17 3 chr5 158964474 158964769 -44120763 - AluSx SINE Alu -13 299 1 432 277 130 108 chr5 158964847 158965154 -44120378 - L2 LINE L2 -1 3271 2958 197 264 64 56 chr5 158965251 158965376 -44120156 - L2 LINE L2 -337 2976 2851 2354 103 0 3 chr5 158965583 158965884 -44119648 + AluSx SINE Alu 1 300 -12 564 89 0 0 chr5 158965890 158965969 -44119563 + (GGAA)n Simple_repeat Simple_repeat 2 80 0 306 304 88 0 chr5 158966311 158966413 -44119119 - HAL1b LINE L1 -3 1345 1235 666 184 81 17 chr5 158966418 158966592 -44118940 - L1MC5 LINE L1 -38 7923 7739 2125 124 27 3 chr5 158966619 158966917 -44118615 - AluSx SINE Alu -7 305 1 252 213 19 93 chr5 158966930 158967038 -44118494 - L1MC5 LINE L1 -406 7555 7456 2439 55 0 3 chr5 158967106 158967438 -44118094 - AluY SINE Alu 0 311 1 445 217 100 92 chr5 158967544 158967793 -44117739 - L1ME4a LINE L1 -164 5957 5707 2383 73 7 0 chr5 158967807 158968096 -44117436 - AluSc SINE Alu -18 291 1 342 0 0 0 chr5 158968220 158968258 -44117274 + (CA)n Simple_repeat Simple_repeat 2 39 0 506 308 36 36 chr5 158968447 158968694 -44116838 + MIR SINE MIR 2 248 -14 1277 266 125 35 chr5 158969091 158969699 -44115833 - L1MC4 LINE L1 -267 7775 7113 1587 98 73 45 chr5 158969790 158970036 -44115496 - AluSc SINE Alu -16 293 41 338 324 19 0 chr5 158970133 158970241 -44115291 + L2 LINE L2 3154 3263 -9 2386 97 0 13 chr5 158970242 158970550 -44114982 + AluSg SINE Alu 5 308 -2 184 239 0 0 chr5 158970949 158970995 -44114537 - L2 LINE L2 0 3313 3268 1625 116 0 0 chr5 158971885 158972101 -44113431 + AluSg/x SINE Alu 83 298 -14 607 286 85 13 chr5 158972647 158972871 -44112661 + MIR SINE MIR 11 250 -12 2219 98 20 7 chr5 158973092 158973389 -44112143 + AluSg SINE Alu 1 301 -9 434 264 139 28 chr5 158973389 158973605 -44111927 + MIR SINE MIR 22 261 -1 320 308 138 0 chr5 158973866 158974025 -44111507 - MIR SINE MIR -71 191 11 938 146 21 36 chr5 158974127 158974319 -44111213 - MER53 DNA DNA 0 189 1 308 212 30 61 chr5 158975280 158975379 -44110153 - MIR3 SINE MIR -52 156 61 243 171 0 0 chr5 158976517 158976558 -44108974 - MER5A DNA MER1_type -111 78 38 290 212 35 24 chr5 158976576 158976661 -44108871 + MIR3 SINE MIR 108 193 -15 449 287 47 20 chr5 158976885 158977035 -44108497 + MIR SINE MIR 103 256 -6 1385 101 6 0 chr5 158977037 158977215 -44108317 + AluSg/x SINE Alu 123 301 -11 187 277 71 54 chr5 158977282 158977394 -44108138 - L2 LINE L2 -22 3250 3137 920 255 32 16 chr5 158977452 158977699 -44107833 - MIR SINE MIR 0 262 12 22 0 0 0 chr5 158980244 158980266 -44105266 + GC_rich Low_complexity Low_complexity 1 22 0 1241 181 39 18 chr5 158984951 158985233 -44100299 + L1MB7 LINE L1 5878 6165 -19 1765 158 34 10 chr5 158985452 158985743 -44099789 - AluJb SINE Alu -14 298 1 1918 163 139 0 chr5 158987231 158987605 -44097927 + MSTB LTR MaLR 1 426 0 275 299 121 58 chr5 158987728 158987812 -44097720 + MIR3 SINE MIR 11 88 -120 1778 91 0 0 chr5 158987812 158988033 -44097499 - AluY SINE Alu -2 309 89 275 299 121 58 chr5 158988033 158988122 -44097410 + MIR3 SINE MIR 88 195 -13 557 239 58 53 chr5 158988791 158988979 -44096553 - MIR3 SINE MIR -15 193 5 198 0 0 0 chr5 158989500 158989522 -44096010 + (A)n Simple_repeat Simple_repeat 1 22 0 364 273 82 45 chr5 158993424 158993607 -44091925 + L1MC/D LINE L1 5625 5827 -386 1653 107 0 14 chr5 158993607 158993861 -44091671 - AluSc SINE Alu 0 316 66 364 273 82 45 chr5 158993861 158993924 -44091608 + L1MC/D LINE L1 5827 5886 -327 1204 144 0 52 chr5 158994139 158994368 -44091164 + AluJb SINE Alu 86 302 -10 207 0 0 0 chr5 158994629 158994652 -44090880 + (A)n Simple_repeat Simple_repeat 1 23 0 2118 125 3 0 chr5 158996731 158997018 -44088514 + AluJb SINE Alu 1 288 -24 954 217 0 17 chr5 158998197 158998377 -44087155 - AluJb SINE Alu -1 311 135 2063 149 3 0 chr5 158998378 158998686 -44086846 - AluSx SINE Alu -3 309 1 1587 168 24 17 chr5 158999117 158999414 -44086118 - AluJo SINE Alu -11 301 3 245 277 128 21 chr5 159000026 159000120 -44085412 + MIR SINE MIR 72 175 -87 712 173 0 50 chr5 159000564 159000703 -44084829 + FLAM_C SINE Alu 2 133 0 1517 169 32 12 chr5 159000808 159001056 -44084476 + AluJb SINE Alu 54 306 -6 202 352 106 6 chr5 159001056 159001235 -44084297 + MIR SINE MIR 51 247 -15 1044 155 46 0 chr5 159001687 159001861 -44083671 - MER58A DNA MER1_type 0 224 43 1899 165 0 3 chr5 159001948 159002239 -44083293 - AluJb SINE Alu -13 299 10 302 283 44 67 chr5 159002772 159002952 -44082580 + HAL1 LINE L1 2331 2506 -1 2033 148 0 7 chr5 159003016 159003307 -44082225 + AluJb SINE Alu 1 289 -23 1418 266 35 39 chr5 159003367 159003878 -44081654 - L2 LINE L2 0 3313 2805 1897 157 13 16 chr5 159003886 159004198 -44081334 + AluJb SINE Alu 1 311 -1 2605 68 3 0 chr5 159004200 159004508 -44081024 + AluSp SINE Alu 1 309 -4 801 190 13 44 chr5 159004659 159004885 -44080647 + L1MDa LINE L1 2195 2413 -4127 1019 182 0 0 chr5 159004901 159005055 -44080477 - AluJb SINE Alu -23 289 136 2558 73 0 0 chr5 159005056 159005358 -44080174 - AluY SINE Alu -9 302 1 1709 172 32 3 chr5 159005358 159005507 -44080025 - AluSx SINE Alu -19 293 150 1873 80 0 0 chr5 159005507 159005731 -44079801 - AluSq SINE Alu -89 224 1 1709 172 32 3 chr5 159005731 159005866 -44079666 - AluSx SINE Alu -162 150 1 936 191 39 39 chr5 159005868 159005991 -44079541 - L1M4 LINE L1 -2396 3750 3628 2142 128 0 7 chr5 159005991 159006287 -44079245 + AluSx SINE Alu 1 294 -18 936 191 39 39 chr5 159006287 159006419 -44079113 - L1M4 LINE L1 -2517 3629 3495 1124 55 0 0 chr5 159006437 159006564 -44078968 - AluSc SINE Alu -178 131 5 1516 250 35 13 chr5 159006569 159007105 -44078427 - L1M4 LINE L1 -2632 3514 2967 2209 116 0 26 chr5 159007113 159007286 -44078246 - AluSx SINE Alu -10 302 139 2282 103 3 0 chr5 159007286 159007578 -44077954 - AluSg SINE Alu -17 293 1 1365 130 0 5 chr5 159007578 159007714 -44077818 - AluSx SINE Alu -177 135 1 2209 116 0 26 chr5 159007578 159007714 -44077818 - AluSx SINE Alu -173 139 1 1876 115 4 4 chr5 159007776 159008037 -44077495 + AluSx SINE Alu 1 261 -51 567 196 45 0 chr5 159008037 159008170 -44077362 - MER104 DNA Tc2 -3 177 39 673 208 25 46 chr5 159008180 159008377 -44077155 + L1MB5 LINE L1 3918 4110 -2036 2329 110 10 0 chr5 159008404 159008712 -44076820 + AluSx SINE Alu 1 311 -1 513 145 0 0 chr5 159008405 159008800 -44076732 + AluSq SINE Alu 2 396 0 556 216 29 0 chr5 159008848 159008987 -44076545 + L1MB5 LINE L1 4448 4590 -1556 2597 186 25 19 chr5 159009000 159009152 -44076380 + L1MB5 LINE L1 5599 5749 -425 2206 120 0 3 chr5 159009152 159009452 -44076080 + AluSg SINE Alu 3 301 -9 2597 186 25 19 chr5 159009452 159009864 -44075668 + L1MB5 LINE L1 5749 6166 -8 584 211 54 16 chr5 159009901 159010086 -44075446 + L1MC4 LINE L1 7711 7902 -140 1902 167 86 18 chr5 159010090 159010464 -44075068 + L1MB7 LINE L1 5693 6103 -81 1336 163 160 12 chr5 159010464 159010783 -44074749 + MER47A DNA MER2_type 1 366 0 1902 167 86 18 chr5 159010783 159010852 -44074680 + L1MB7 LINE L1 6103 6166 -18 2430 189 134 49 chr5 159010902 159011027 -44074505 + L1ME1 LINE L1 4994 5107 -1059 2490 74 0 3 chr5 159011027 159011339 -44074193 + AluY SINE Alu 1 311 0 2430 189 134 49 chr5 159011339 159012294 -44073238 + L1ME1 LINE L1 5107 6161 -5 1709 182 30 0 chr5 159012368 159012664 -44072868 + AluJo SINE Alu 1 305 -7 615 181 181 38 chr5 159012734 159012894 -44072638 - MER58A DNA MER1_type -41 183 1 303 369 8 0 chr5 159012902 159013024 -44072508 + L1 LINE L1 4910 5032 -1114 1732 111 4 0 chr5 159013099 159013333 -44072199 + AluSx SINE Alu 1 235 -77 2200 106 13 10 chr5 159013374 159013677 -44071855 + AluSg SINE Alu 1 304 -6 445 263 74 67 chr5 159013831 159014199 -44071333 + L1MCc LINE L1 782 1146 -5394 2125 82 61 0 chr5 159014199 159014492 -44071040 + AluY SINE Alu 1 311 0 445 263 74 67 chr5 159014492 159014910 -44070622 + L1MCc LINE L1 1146 1726 -4814 1681 189 14 4 chr5 159014931 159015211 -44070321 + AluJo SINE Alu 11 293 -19 438 275 79 34 chr5 159015295 159015473 -44070059 + L1MCc LINE L1 1936 2121 -4600 1331 155 4 47 chr5 159015600 159015832 -44069700 + AluJb SINE Alu 85 306 -6 1428 234 120 19 chr5 159015832 159016817 -44068715 + L1MCc LINE L1 2297 3357 -3183 740 244 55 53 chr5 159016825 159017234 -44068298 + L1MCc LINE L1 2474 2883 -3657 339 115 33 0 chr5 159017234 159017295 -44068237 + L1MC4 LINE L1 7468 7530 -512 411 145 108 24 chr5 159017328 159017411 -44068121 + LTR52 LTR ERVL 1 90 -331 697 225 16 32 chr5 159017426 159017613 -44067919 + LTR52 LTR ERVL 52 235 -186 1022 165 37 0 chr5 159017613 159017777 -44067755 - AluJb SINE Alu -8 304 135 887 164 60 0 chr5 159017777 159017960 -44067572 + LTR52 LTR ERVL 225 418 -3 1166 174 136 72 chr5 159017960 159018169 -44067363 + L1MC4 LINE L1 7597 7791 -251 1698 150 45 28 chr5 159018169 159018455 -44067077 + AluJo SINE Alu 1 291 -21 1166 174 136 72 chr5 159018455 159018664 -44066868 + L1MC4 LINE L1 7791 8042 0 432 255 95 10 chr5 159018740 159018940 -44066592 + L1MCc LINE L1 2952 3168 -3372 2366 171 38 69 chr5 159019010 159019195 -44066337 + MLT1D LTR MaLR 1 190 -315 920 213 0 0 chr5 159019195 159019355 -44066177 - FRAM SINE Alu -6 160 1 2366 171 38 69 chr5 159019355 159019690 -44065842 + MLT1D LTR MaLR 190 505 0 1219 133 4 75 chr5 159019727 159019982 -44065550 + MLT1B LTR MaLR 154 390 0 1922 132 0 46 chr5 159020008 159020311 -44065221 + AluSx SINE Alu 1 289 -23 2260 85 0 10 chr5 159020359 159020652 -44064880 + AluSq SINE Alu 1 290 -23 720 279 96 58 chr5 159020696 159020998 -44064534 + L1MCc LINE L1 3432 3721 -2819 2092 114 7 0 chr5 159020998 159021279 -44064253 + AluSq SINE Alu 1 283 -30 720 279 96 58 chr5 159021279 159021893 -44063639 + L1MCc LINE L1 3721 4383 -2157 2253 84 0 11 chr5 159023685 159023995 -44061537 - AluSx SINE Alu 0 308 2 636 235 111 37 chr5 159024020 159024425 -44061107 + L1MC5 LINE L1 7457 7891 -70 617 213 286 11 chr5 159026878 159027249 -44058283 - L1MC5 LINE L1 -37 7924 7452 302 276 138 13 chr5 159028639 159028791 -44056741 - L1ME4a LINE L1 -103 6018 5848 427 229 181 37 chr5 159029323 159029594 -44055938 + L1MC4a LINE L1 5819 6128 -1680 206 245 0 0 chr5 159029609 159029662 -44055870 + A-rich Low_complexity Low_complexity 1 53 0 3596 230 129 80 chr5 159032498 159033615 -44051917 - L2 LINE L2 -1761 1553 344 2117 120 0 0 chr5 159033615 159033943 -44051589 + AluSx SINE Alu 1 328 0 3596 230 129 80 chr5 159033943 159034292 -44051240 - L2 LINE L2 -2970 344 14 249 240 192 19 chr5 159036220 159036324 -44049208 + MIR SINE MIR 21 142 -120 2280 103 7 0 chr5 159036493 159036803 -44048729 + AluSx SINE Alu 1 312 0 290 303 117 41 chr5 159037988 159038133 -44047399 + MIR SINE MIR 56 211 -51 1471 97 0 0 chr5 159039532 159039717 -44045815 + AluSg SINE Alu 1 185 -125 561 100 0 0 chr5 159039717 159039797 -44045735 + AluSg SINE Alu 217 296 -13 2660 23 3 0 chr5 159040167 159040469 -44045063 + AluY SINE Alu 1 303 -8 336 24 0 0 chr5 159041002 159041043 -44044489 + (GGA)n Simple_repeat Simple_repeat 3 43 0 586 322 23 34 chr5 159041261 159041438 -44044094 - MIR3 SINE MIR -11 197 23 2379 97 0 0 chr5 159042379 159042687 -44042845 + AluSx SINE Alu 1 308 -4 386 243 62 110 chr5 159046467 159046680 -44038852 + L1ME4a LINE L1 5541 5730 -391 2401 78 0 0 chr5 159046680 159046986 -44038546 + AluSg SINE Alu 1 306 -4 386 243 62 110 chr5 159046986 159047146 -44038386 + L1ME4a LINE L1 5730 5896 -225 2212 195 49 16 chr5 159047967 159048419 -44037113 + MLT1C LTR MaLR 1 467 0 2460 67 0 19 chr5 159048785 159049100 -44036432 + AluY SINE Alu 1 309 -2 874 162 0 21 chr5 159050711 159050853 -44034679 - FLAM_C SINE Alu -4 139 1 2331 85 0 7 chr5 159051973 159052267 -44033265 - AluSg SINE Alu -18 292 1 337 231 73 84 chr5 159052416 159052537 -44032995 + L1MC5 LINE L1 7380 7501 -460 1708 133 76 0 chr5 159052537 159052800 -44032732 + AluSg SINE Alu 6 288 -22 337 231 73 84 chr5 159052800 159052964 -44032568 + L1MC5 LINE L1 7501 7662 -299 498 241 8 124 chr5 159052964 159053205 -44032327 + MER102a DNA MER1_type 115 327 -3 256 167 0 0 chr5 159053314 159053356 -44032176 - MIR SINE MIR -18 244 203 180 111 0 0 chr5 159055479 159055506 -44030026 + (A)n Simple_repeat Simple_repeat 1 27 0 624 271 115 25 chr5 159055538 159055904 -44029628 + L1ME3A LINE L1 5368 5766 -398 266 266 156 55 chr5 159056441 159056806 -44028726 + L1ME3A LINE L1 5754 6155 -15 832 131 0 15 chr5 159056931 159057061 -44028471 - FLAM_A SINE Alu -4 129 2 536 308 113 41 chr5 159057779 159058220 -44027312 + L2 LINE L2 2502 2974 -340 411 313 67 7 chr5 159058455 159058605 -44026927 - MIR3 SINE MIR -14 194 36 288 0 0 0 chr5 159058708 159058740 -44026792 + (TA)n Simple_repeat Simple_repeat 2 33 0 2325 82 0 28 chr5 159058815 159059133 -44026399 + AluSg SINE Alu 2 310 0 327 25 0 0 chr5 159059500 159059540 -44025992 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1994 242 87 47 chr5 159059886 159060531 -44025001 + HAL1 LINE L1 2 672 -1835 325 202 83 18 chr5 159060573 159060682 -44024850 + Charlie5 DNA MER1_type 1 116 -2496 4719 132 66 56 chr5 159060682 159060828 -44024704 + L1MC1 LINE L1 5370 5513 -820 1885 96 85 4 chr5 159060828 159061109 -44024423 - AluSx SINE Alu -8 304 1 4719 132 66 56 chr5 159061109 159061472 -44024060 + L1MC1 LINE L1 5513 5871 -462 1874 142 0 3 chr5 159061472 159061768 -44023764 + AluSx SINE Alu 1 295 -17 2294 100 0 0 chr5 159061771 159062080 -44023452 + AluSq SINE Alu 1 309 -4 4719 132 66 56 chr5 159062080 159062418 -44023114 + L1MC1 LINE L1 5872 6236 -97 2063 137 18 49 chr5 159062418 159062804 -44022728 + THE1C LTR MaLR 2 375 0 4719 132 66 56 chr5 159062804 159062904 -44022628 + L1MC1 LINE L1 6236 6333 0 1005 171 23 97 chr5 159062914 159063060 -44022472 + AluJo SINE Alu 1 121 -191 2179 74 3 17 chr5 159063060 159063356 -44022176 + AluY SINE Alu 1 292 -19 1005 171 23 97 chr5 159063356 159063467 -44022065 + AluJo SINE Alu 121 239 -73 243 0 0 0 chr5 159063496 159063523 -44022009 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 467 143 79 6 chr5 159063523 159063729 -44021803 + Charlie5 DNA MER1_type 2356 2585 -27 2890 227 198 7 chr5 159063730 159064680 -44020852 + HAL1 LINE L1 748 1878 -629 748 120 0 9 chr5 159066528 159066636 -44018896 - AluSq SINE Alu -78 235 129 1788 202 114 56 chr5 159066752 159066883 -44018649 + MLT1E2 LTR MaLR 1 123 -503 708 189 8 23 chr5 159066883 159067039 -44018493 - FLAM_A SINE Alu 0 133 1 1788 202 114 56 chr5 159067039 159067497 -44018035 + MLT1E2 LTR MaLR 123 626 0 204 298 18 18 chr5 159067596 159067653 -44017879 + MIR SINE MIR 83 139 -123 2601 70 0 0 chr5 159067924 159068277 -44017255 + L1PA5 LINE L1 5827 6179 0 1736 155 14 7 chr5 159068316 159068600 -44016932 - AluSx SINE Alu -24 288 3 26 0 0 0 chr5 159068706 159068732 -44016800 + AT_rich Low_complexity Low_complexity 1 26 0 2133 100 3 0 chr5 159069236 159069527 -44016005 - AluY SINE Alu -19 292 1 507 92 92 0 chr5 159070295 159070382 -44015150 + L1MA9 LINE L1 6218 6312 0 325 311 135 20 chr5 159072608 159072756 -44012776 + MIR3 SINE MIR 20 184 -24 1986 100 0 0 chr5 159073403 159073674 -44011858 - AluSx SINE Alu -8 304 34 307 292 44 26 chr5 159074923 159075036 -44010496 - MIR3 SINE MIR -28 180 66 235 286 167 83 chr5 159075059 159075171 -44010361 + MIR3 SINE MIR 20 152 -56 1017 146 6 12 chr5 159075171 159075335 -44010197 + FRAM SINE Alu 1 163 -3 235 286 167 83 chr5 159075335 159075390 -44010142 + MIR3 SINE MIR 152 201 -7 850 295 33 20 chr5 159076416 159076660 -44008872 + MIR SINE MIR 2 248 -14 767 121 0 108 chr5 159077027 159077139 -44008393 + FLAM_C SINE Alu 1 124 -188 222 37 0 0 chr5 159077139 159077166 -44008366 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1650 109 31 75 chr5 159077168 159077310 -44008222 - AluSg SINE Alu -29 281 157 2290 83 7 0 chr5 159077310 159077610 -44007922 - AluSc SINE Alu -7 302 1 1650 109 31 75 chr5 159077610 159077761 -44007771 - AluSg SINE Alu -153 157 1 767 121 0 108 chr5 159077761 159077802 -44007730 + FLAM_C SINE Alu 125 140 -172 1657 159 3 49 chr5 159077805 159078132 -44007400 + AluJb SINE Alu 1 312 0 432 246 94 0 chr5 159078461 159078599 -44006933 + L1ME1 LINE L1 5040 5190 -956 842 239 21 5 chr5 159078599 159078787 -44006745 + AluJb SINE Alu 122 312 0 208 211 0 0 chr5 159078799 159078837 -44006695 + GA-rich Low_complexity Low_complexity 3 40 0 2497 194 83 56 chr5 159078877 159078985 -44006547 + L1ME1 LINE L1 5317 5421 -745 2060 121 0 0 chr5 159078985 159079301 -44006231 + AluSq SINE Alu 1 316 0 2497 194 83 56 chr5 159079301 159079941 -44005591 + L1ME1 LINE L1 5421 6087 -79 234 205 354 0 chr5 159079859 159079986 -44005546 + L1MA10 LINE L1 6161 6332 -2 * 397 227 0 0 chr5 159080720 159080795 -44004737 + L3 LINE CR1 1492 1566 -11 27 49 0 0 chr5 159082304 159082345 -44003187 + AT_rich Low_complexity Low_complexity 1 41 0 2220 82 13 0 chr5 159082354 159082659 -44002873 + AluSg SINE Alu 1 309 -1 2375 60 0 7 chr5 159082660 159082961 -44002571 + AluY SINE Alu 1 299 -12 430 309 88 40 chr5 159086841 159087090 -43998442 - MIR SINE MIR 0 262 2 225 333 60 0 chr5 159087289 159087373 -43998159 + L2 LINE L2 3158 3246 -26 204 250 33 17 chr5 159087714 159087774 -43997758 - L2 LINE L2 -2 3270 3210 * 271 179 36 0 chr5 159087751 159087807 -43997725 - MIR SINE MIR -34 228 171 204 328 16 0 chr5 159087928 159087992 -43997540 + MIR SINE MIR 194 258 -4 810 313 78 23 chr5 159088869 159089428 -43996104 - L2 LINE L2 0 3313 2716 2293 92 3 0 chr5 159089525 159089830 -43995702 + AluSc SINE Alu 1 306 -3 379 246 86 106 chr5 159089939 159090034 -43995498 + MIR SINE MIR 9 104 -158 2185 77 3 32 chr5 159090034 159090345 -43995187 + AluSp SINE Alu 2 303 -10 379 246 86 106 chr5 159090345 159090505 -43995027 + MIR SINE MIR 104 259 -3 271 149 28 140 chr5 159091197 159091304 -43994228 - L1MC5 LINE L1 -212 7749 7655 474 251 72 53 chr5 159091386 159091455 -43994077 + L1ME4a LINE L1 5533 5599 -522 1912 123 3 65 chr5 159091455 159091779 -43993753 + AluJo SINE Alu 1 304 -8 474 251 72 53 chr5 159091779 159091916 -43993616 + L1ME4a LINE L1 5599 5743 -378 323 259 103 69 chr5 159092034 159092266 -43993266 + L1ME4a LINE L1 5880 6119 -2 306 244 374 0 chr5 159093539 159093670 -43991862 + L1ME3 LINE L1 5981 6160 -2 1039 107 6 30 chr5 159093793 159093961 -43991571 + AluSg/x SINE Alu 135 298 -12 180 0 0 0 chr5 159094000 159094020 -43991512 + (CA)n Simple_repeat Simple_repeat 2 21 0 781 285 76 40 chr5 159094020 159094315 -43991217 + L2 LINE L2 2537 2845 -469 1501 172 4 15 chr5 159094317 159094578 -43990954 - AluJo SINE Alu -54 258 1 794 319 112 6 chr5 159094578 159094926 -43990606 + L2 LINE L2 2927 3311 -2 576 283 73 81 chr5 159095987 159096358 -43989174 - L2 LINE L2 -3 3310 2943 309 260 146 0 chr5 159097466 159097589 -43987943 - L2 LINE L2 -4 3309 3169 192 373 0 0 chr5 159097757 159097832 -43987700 + MIR SINE MIR 188 262 0 966 214 51 25 chr5 159097868 159098054 -43987478 + L1ME1 LINE L1 5879 6076 -90 921 113 8 8 chr5 159098054 159098187 -43987345 - FLAM_C SINE Alu 0 133 1 966 214 51 25 chr5 159098187 159098276 -43987256 + L1ME1 LINE L1 6076 6161 -5 762 102 0 0 chr5 159098385 159098493 -43987039 - AluSg/x SINE Alu -9 303 196 973 211 90 13 chr5 159098523 159098835 -43986697 + HAL1 LINE L1 1983 2318 -189 930 239 63 5 chr5 159098859 159099064 -43986468 + MIR SINE MIR 15 231 -31 419 246 5 98 chr5 159099064 159099221 -43986311 + HAL1 LINE L1 2278 2411 -96 2320 86 0 3 chr5 159099221 159099525 -43986007 - AluSx SINE Alu -9 303 1 419 246 5 98 chr5 159099525 159099582 -43985950 + HAL1 LINE L1 2411 2472 -35 360 336 47 35 chr5 159100128 159100340 -43985192 + MIR SINE MIR 24 236 -26 1434 188 86 71 chr5 159100340 159100744 -43984788 + L1MC5 LINE L1 7401 7816 -145 2293 95 0 0 chr5 159100744 159101049 -43984483 + AluSx SINE Alu 1 305 -7 1434 188 86 71 chr5 159101049 159101165 -43984367 + L1MC5 LINE L1 7816 7929 -32 585 300 130 44 chr5 159101380 159101888 -43983644 + L2 LINE L2 2726 3272 0 1272 174 58 27 chr5 159102814 159103107 -43982425 - AluJo SINE Alu -9 303 2 30 45 0 0 chr5 159104019 159104063 -43981469 + GC_rich Low_complexity Low_complexity 1 44 0 343 155 211 0 chr5 159108994 159109065 -43976467 + L2 LINE L2 3225 3310 -3 2030 170 0 22 chr5 159109367 159109725 -43975807 + L1PB4 LINE L1 5807 6156 0 555 275 82 30 chr5 159109860 159110093 -43975439 - MIR SINE MIR -3 259 15 618 216 67 49 chr5 159110451 159110695 -43974837 - MIR SINE MIR -3 259 16 383 225 80 75 chr5 159110710 159110773 -43974759 - MIR SINE MIR -1 261 200 2267 86 7 0 chr5 159110773 159111075 -43974457 + AluSp SINE Alu 1 304 -9 383 225 80 75 chr5 159111075 159111198 -43974334 - MIR SINE MIR -62 200 74 779 304 8 24 chr5 159112539 159112792 -43972740 - MIR SINE MIR -11 251 3 313 314 41 0 chr5 159112793 159112914 -43972618 - MIR SINE MIR -4 258 133 911 253 39 21 chr5 159113452 159113685 -43971847 - MIR SINE MIR -25 237 1 321 293 65 37 chr5 159114869 159115048 -43970484 - MIR SINE MIR -32 230 47 243 254 0 17 chr5 159115399 159115458 -43970074 - MIR SINE MIR -15 247 190 * 981 294 100 3 chr5 159115454 159115968 -43969564 + L2 LINE L2 2724 3312 -1 446 294 27 0 chr5 159115977 159116123 -43969409 - MIR SINE MIR -111 151 2 937 229 28 20 chr5 159117239 159117488 -43968044 - MIR SINE MIR -1 261 11 941 292 115 45 chr5 159119315 159120090 -43965442 + L2 LINE L2 2252 3113 -200 2101 110 7 0 chr5 159120090 159120382 -43965150 - AluSx SINE Alu -18 294 1 941 292 115 45 chr5 159120382 159120599 -43964933 + L2 LINE L2 3113 3313 0 233 329 13 0 chr5 159120934 159121010 -43964522 - MIR3 SINE MIR -51 157 81 652 269 155 5 chr5 159121699 159121918 -43963614 - MIR SINE MIR -3 259 8 2247 112 3 0 chr5 159121943 159122247 -43963285 - AluSq SINE Alu -8 305 1 250 156 31 0 chr5 159122302 159122366 -43963166 + CT-rich Low_complexity Low_complexity 2 67 0 449 91 0 13 chr5 159122391 159122468 -43963064 + (CA)n Simple_repeat Simple_repeat 2 77 0 2465 278 79 47 chr5 159124138 159125515 -43960017 - L2 LINE L2 0 3313 1887 433 235 260 0 chr5 159126066 159126266 -43959266 + MIR SINE MIR 10 261 -1 303 239 0 0 chr5 159126339 159126406 -43959126 + L1M3f LINE L1 39 105 -5223 410 221 177 0 chr5 159127171 159127284 -43958248 - L2 LINE L2 -3 3269 3137 982 210 8 71 chr5 159127289 159127420 -43958112 - MER58A DNA MER1_type -2196 224 113 2528 36 0 7 chr5 159127420 159127723 -43957809 + AluY SINE Alu 1 301 -10 982 210 8 71 chr5 159127723 159127829 -43957703 - MER58A DNA MER1_type -2307 113 2 852 153 0 14 chr5 159127848 159127992 -43957540 - FLAM_C SINE Alu -1 142 1 2021 138 3 6 chr5 159128263 159128574 -43956958 - AluSx SINE Alu -2 310 1 570 241 26 72 chr5 159128575 159128770 -43956762 - MIR SINE MIR -71 191 6 288 77 0 0 chr5 159128797 159128836 -43956696 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 236 223 154 15 chr5 159129613 159129743 -43955789 + L2 LINE L2 3009 3156 -157 2071 191 53 18 chr5 159129743 159130324 -43955208 - MER82 DNA MER2_type -1 652 2 209 312 128 57 chr5 159130325 159130466 -43955066 + L2 LINE L2 3161 3311 -2 1877 121 35 0 chr5 159130509 159130798 -43954734 - AluSq SINE Alu -14 299 1 509 233 139 0 chr5 159131017 159131197 -43954335 - MER2 DNA MER2_type 0 345 141 2162 118 3 6 chr5 159131312 159131625 -43953907 + AluSx SINE Alu 1 312 0 511 315 55 14 chr5 159131830 159132039 -43953493 - MIR SINE MIR -19 243 24 426 294 123 13 chr5 159132629 159132864 -43952668 - MIR SINE MIR -1 261 1 1087 235 8 30 chr5 159132945 159132958 -43952574 - MIR SINE MIR 0 262 250 2201 86 0 26 chr5 159132958 159133288 -43952244 + AluSx SINE Alu 1 322 0 1087 235 8 30 chr5 159133288 159133541 -43951991 - MIR SINE MIR -12 250 1 245 306 13 38 chr5 159133856 159134013 -43951519 + GA-rich Low_complexity Low_complexity 3 155 0 195 42 0 0 chr5 159134058 159134082 -43951450 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 1368 132 81 21 chr5 159134168 159134403 -43951129 - AluJb SINE Alu -63 249 1 937 189 28 125 chr5 159134536 159134636 -43950896 - MER5C DNA MER1_type 0 324 216 2065 97 27 7 chr5 159134636 159134936 -43950596 - AluSq SINE Alu -7 306 1 937 189 28 125 chr5 159134936 159134968 -43950564 - MER5C DNA MER1_type -108 216 182 2160 109 0 3 chr5 159134968 159135280 -43950252 + AluSq SINE Alu 1 311 -2 937 189 28 125 chr5 159135280 159135331 -43950201 - MER5C DNA MER1_type -142 182 128 1593 136 81 7 chr5 159135331 159135603 -43949929 - AluJo SINE Alu -20 292 1 937 189 28 125 chr5 159135603 159135776 -43949756 - MER5C DNA MER1_type -196 128 1 186 189 0 0 chr5 159136219 159136256 -43949276 + (CAT)n Simple_repeat Simple_repeat 3 39 0 239 217 337 0 chr5 159136269 159136361 -43949171 - MIR SINE MIR -16 246 124 634 295 83 29 chr5 159136581 159136822 -43948710 + MIR SINE MIR 7 260 -2 893 219 48 9 chr5 159137352 159137562 -43947970 - MIR SINE MIR -43 219 2 2462 77 3 0 chr5 159141161 159141472 -43944060 - AluSp SINE Alu -1 312 1 1704 108 30 54 chr5 159141472 159141767 -43943765 - AluJo SINE Alu -24 288 1 629 294 49 54 chr5 159142009 159142458 -43943074 + L2 LINE L2 2577 3061 -252 526 256 36 0 chr5 159142491 159142628 -43942904 + MER5B DNA MER1_type 1 142 -36 28 0 0 0 chr5 159142630 159142658 -43942874 + AT_rich Low_complexity Low_complexity 1 28 0 2170 91 0 14 chr5 159142658 159142955 -43942577 + AluSg SINE Alu 1 293 -17 2657 248 113 25 chr5 159143002 159143297 -43942235 + L2 LINE L2 1385 1652 -1662 2098 87 35 3 chr5 159143297 159143583 -43941949 + AluSc SINE Alu 1 295 -14 2657 248 113 25 chr5 159143583 159144259 -43941273 + L2 LINE L2 1652 2442 -872 954 131 6 0 chr5 159144260 159144435 -43941097 - MER33 DNA MER1_type 0 363 188 638 240 0 0 chr5 159144524 159144653 -43940879 - MER33 DNA MER1_type -193 131 3 990 228 210 0 chr5 159144655 159144945 -43940587 + L2 LINE L2 2436 2786 -528 1143 140 0 0 chr5 159144992 159145170 -43940362 - AluSg/x SINE Alu 0 310 133 2015 107 7 13 chr5 159145170 159145470 -43940062 - AluSq SINE Alu -15 298 1 1179 247 63 77 chr5 159145473 159145779 -43939753 + L2 LINE L2 2811 3109 -204 1668 110 0 0 chr5 159145779 159146007 -43939525 - AluSq SINE Alu -85 228 1 1179 247 63 77 chr5 159146007 159146210 -43939322 + L2 LINE L2 3109 3313 0 2266 102 0 0 chr5 159146226 159146530 -43939002 + AluSx SINE Alu 1 304 -8 343 287 98 35 chr5 159146530 159146704 -43938828 + L2 LINE L2 3129 3313 0 408 181 24 0 chr5 159147909 159147992 -43937540 - MIR SINE MIR -62 146 62 305 267 7 30 chr5 159149158 159149293 -43936239 + (CGGGG)n Simple_repeat Simple_repeat 5 136 0 238 206 15 15 chr5 159149448 159149516 -43936016 + (CCCCG)n Simple_repeat Simple_repeat 5 72 0 291 283 0 20 chr5 159149659 159149758 -43935774 + (CAGAGA)n Simple_repeat Simple_repeat 3 99 0 522 31 0 0 chr5 159150320 159150384 -43935148 + (TG)n Simple_repeat Simple_repeat 2 65 0 466 256 106 28 chr5 159150655 159150835 -43934697 - MIR SINE MIR 0 262 69 1144 249 185 8 chr5 159150926 159151320 -43934212 + LTR16B LTR ERVL 1 464 0 2081 159 71 0 chr5 159151407 159151846 -43933686 - Charlie4a DNA MER1_type 0 508 39 1478 81 18 59 chr5 159151981 159152203 -43933329 - AluSq SINE Alu -100 213 1 1724 167 14 0 chr5 159152439 159152733 -43932799 + AluJo SINE Alu 1 298 -14 403 240 87 77 chr5 159152805 159152988 -43932544 + MIR SINE MIR 68 252 -10 2193 97 0 13 chr5 159153369 159153680 -43931852 - AluSx SINE Alu -5 307 1 510 315 82 49 chr5 159153721 159154283 -43931249 - L2 LINE L2 -1 3271 2694 286 300 33 11 chr5 159154658 159154748 -43930784 + MIR SINE MIR 51 142 -66 639 221 0 8 chr5 159154754 159154885 -43930647 + MER3 DNA MER1_type 1 130 -79 195 0 27 54 chr5 159154885 159154922 -43930610 + (TTTAA)n Simple_repeat Simple_repeat 1 36 0 262 152 22 0 chr5 159155482 159155528 -43930004 - MSTB2 LTR MaLR 0 457 411 1654 119 88 0 chr5 159155528 159155821 -43929711 - AluSg SINE Alu 0 316 1 1009 306 86 39 chr5 159156920 159157505 -43928027 - ERVL LTR ERVL -356 5408 4797 250 308 48 29 chr5 159157585 159157689 -43927843 - ERVL LTR ERVL -1064 4700 4595 364 182 0 11 chr5 159157724 159157812 -43927720 + L1M4 LINE L1 4965 5051 -1095 1037 355 57 19 chr5 159157822 159158348 -43927184 - ERVL LTR ERVL -1309 4455 3910 771 353 45 0 chr5 159158380 159158737 -43926795 - ERVL LTR ERVL -1751 4013 3641 335 189 216 0 chr5 159159119 159159230 -43926302 - MIR SINE MIR -50 212 78 572 269 33 28 chr5 159160168 159160350 -43925182 + MIR SINE MIR 70 252 -10 180 0 0 0 chr5 159160471 159160491 -43925041 + (CA)n Simple_repeat Simple_repeat 1 20 0 538 307 57 24 chr5 159160971 159161183 -43924349 + MIR SINE MIR 4 222 -40 394 332 108 11 chr5 159161473 159161675 -43923857 - MIR SINE MIR -14 248 21 332 333 96 0 chr5 159162216 159162351 -43923181 + MIR SINE MIR 13 160 -102 515 347 55 5 chr5 159164064 159164283 -43921249 - MIR SINE MIR -2 260 31 445 265 249 16 chr5 159164912 159165101 -43920431 - MIR SINE MIR -15 247 15 275 203 0 0 chr5 159165198 159165257 -43920275 + L2 LINE L2 2914 2972 -300 286 253 153 20 chr5 159165587 159165789 -43919743 + L2 LINE L2 2836 3064 -208 441 310 54 11 chr5 159166022 159166206 -43919326 + MIR SINE MIR 12 203 -59 538 237 47 76 chr5 159166336 159166547 -43918985 + MIR SINE MIR 18 222 -40 307 309 154 30 chr5 159167348 159167581 -43917951 - L2 LINE L2 0 3272 3011 328 252 80 33 chr5 159168317 159168464 -43917068 - MIR SINE MIR -36 172 24 405 290 84 0 chr5 159169135 159169290 -43916242 + L2 LINE L2 3092 3259 -54 220 286 29 50 chr5 159169595 159169735 -43915797 + C-rich Low_complexity Low_complexity 5 141 0 423 38 0 0 chr5 159170253 159170306 -43915226 + (TG)n Simple_repeat Simple_repeat 2 54 0 545 239 155 0 chr5 159170840 159170995 -43914537 + MIR SINE MIR 84 262 0 306 317 88 85 chr5 159171137 159171512 -43914020 - L2 LINE L2 -6 3266 2891 951 244 11 60 chr5 159171523 159171789 -43913743 + MIR SINE MIR 10 262 0 201 283 54 54 chr5 159171833 159171925 -43913607 - L2 LINE L2 -481 2833 2742 1773 232 62 48 chr5 159171939 159172779 -43912753 + L2 LINE L2 2452 3313 0 295 296 143 47 chr5 159172792 159173093 -43912439 - L2 LINE L2 -613 2701 2372 194 263 97 31 chr5 159173115 159173208 -43912324 + MIR3 SINE MIR 110 167 -41 236 308 55 0 chr5 159173830 159173921 -43911611 - L2 LINE L2 -43 3229 3134 * 364 213 291 7 chr5 159173919 159174060 -43911472 - MIR SINE MIR -69 193 13 822 190 115 52 chr5 159174327 159174596 -43910936 - L2 LINE L2 0 3313 3028 913 289 54 11 chr5 159174716 159175086 -43910446 - LTR16A LTR ERVL -44 406 21 402 203 30 68 chr5 159175148 159175281 -43910251 - L2 LINE L2 -565 2749 2622 969 263 106 11 chr5 159176151 159176501 -43909031 + L2 LINE L2 2931 3313 0 311 242 22 11 chr5 159176636 159176727 -43908805 + (TG)n Simple_repeat Simple_repeat 2 93 0 535 250 78 21 chr5 159177624 159177816 -43907716 + MIR SINE MIR 4 206 -56 265 255 160 0 chr5 159177863 159177957 -43907575 - L2 LINE L2 -6 3307 3199 393 291 167 18 chr5 159178426 159178653 -43906879 + MIR SINE MIR 2 262 0 315 301 58 26 chr5 159179152 159179308 -43906224 + L2 LINE L2 2813 2973 -299 279 256 144 0 chr5 159179353 159179443 -43906089 - MIR SINE MIR 0 262 160 936 267 28 12 chr5 159179450 159179494 -43906038 - MIR SINE MIR -2 260 218 2646 53 0 0 chr5 159179494 159179795 -43905737 - AluY SINE Alu -10 301 1 936 267 28 12 chr5 159179795 159179844 -43905688 - MIR SINE MIR -44 218 171 2275 95 3 0 chr5 159179844 159180153 -43905379 - AluSq SINE Alu 0 310 1 936 267 28 12 chr5 159180153 159180308 -43905224 - MIR SINE MIR -91 171 6 483 282 193 5 chr5 159180311 159180524 -43905008 + L2 LINE L2 2994 3246 -26 1166 45 13 0 chr5 159180695 159180851 -43904681 - L1PA4 LINE L1 -4 6151 5994 180 259 37 62 chr5 159181380 159181461 -43904071 - L2 LINE L2 -185 3087 3009 396 244 0 0 chr5 159181659 159181749 -43903783 + MIR SINE MIR 117 206 -56 602 246 60 68 chr5 159181921 159182173 -43903359 + MIR SINE MIR 2 251 -11 300 304 130 0 chr5 159182323 159182438 -43903094 - L2 LINE L2 -2 3270 3141 221 271 42 21 chr5 159182624 159182720 -43902812 + MIR3 SINE MIR 102 199 -9 508 247 46 96 chr5 159183735 159183974 -43901558 - MIR SINE MIR 0 262 36 542 281 141 5 chr5 159184236 159184421 -43901111 - MIR SINE MIR 0 262 53 230 193 121 84 chr5 159184904 159184987 -43900545 - MER91C DNA MER1_type 0 140 55 * 555 253 62 92 chr5 159184983 159185275 -43900257 - L2 LINE L2 -54 3218 2936 259 307 21 79 chr5 159185388 159185528 -43900004 - L2 LINE L2 -209 3063 2932 329 258 0 0 chr5 159185691 159185780 -43899752 + (TGAA)n Simple_repeat Simple_repeat 1 89 0 929 226 13 25 chr5 159185780 159186015 -43899517 - MIR SINE MIR 0 262 31 440 306 128 0 chr5 159186741 159186921 -43898611 - MIR SINE MIR -2 260 58 282 207 14 50 chr5 159187109 159187249 -43898283 + (TCCA)n Simple_repeat Simple_repeat 1 135 0 209 241 0 0 chr5 159187445 159187499 -43898033 + MIR SINE MIR 98 151 -111 2476 67 0 3 chr5 159187977 159188277 -43897255 + AluY SINE Alu 1 299 -12 742 256 18 6 chr5 159188381 159188549 -43896983 - MLT1I LTR MaLR 0 409 240 246 175 0 0 chr5 159188565 159188605 -43896927 - MLT1I LTR MaLR -270 139 100 1007 172 17 17 chr5 159188863 159189037 -43896495 - AluSg/x SINE Alu -5 307 134 2083 145 0 7 chr5 159189037 159189340 -43896192 - AluSx SINE Alu -11 301 1 567 264 83 63 chr5 159189447 159189681 -43895851 - MLT1K LTR MaLR -3 585 347 546 301 90 64 chr5 159189681 159190116 -43895416 + MLT1J2 LTR MaLR 1 450 0 490 288 26 64 chr5 159190116 159190346 -43895186 - MLT1K LTR MaLR -365 223 3 1375 158 5 5 chr5 159190643 159190865 -43894667 - MLT1A1 LTR MaLR 0 365 144 897 109 0 73 chr5 159190885 159190905 -43894627 - FLAM_C SINE Alu -185 127 107 2759 116 12 0 chr5 159190905 159191326 -43894206 - MSTA LTR MaLR 0 428 3 8925 144 29 52 chr5 159191328 159192337 -43893195 - MSTA-int LTR MaLR 0 1651 620 366 42 0 0 chr5 159192337 159192385 -43893147 + (TG)n Simple_repeat Simple_repeat 1 48 0 8925 144 29 52 chr5 159192385 159192642 -43892890 - MSTA-int LTR MaLR -1031 620 359 2333 108 16 0 chr5 159192642 159192949 -43892583 + AluSp SINE Alu 1 312 -1 8925 144 29 52 chr5 159192949 159193007 -43892525 - MSTA-int LTR MaLR -1292 359 301 1749 192 3 0 chr5 159193007 159193293 -43892239 - AluJb SINE Alu -25 287 1 8925 144 29 52 chr5 159193293 159193597 -43891935 - MSTA-int LTR MaLR -1350 301 59 1906 140 18 0 chr5 159193597 159193869 -43891663 - AluSx SINE Alu -15 297 21 8925 144 29 52 chr5 159193869 159193927 -43891605 - MSTA-int LTR MaLR -1592 59 1 2753 106 9 41 chr5 159193927 159193978 -43891554 - MSTA LTR MaLR 0 428 377 1850 100 0 63 chr5 159193978 159194249 -43891283 - AluSq SINE Alu 0 313 60 2753 106 9 41 chr5 159194249 159194639 -43890893 - MSTA LTR MaLR -51 377 1 897 109 0 73 chr5 159194639 159194751 -43890781 - FLAM_C SINE Alu -204 108 1 657 119 164 8 chr5 159194753 159194887 -43890645 - MLT1A1 LTR MaLR -210 155 1 241 289 41 31 chr5 159195665 159195762 -43889770 + L3b LINE CR1 1337 1434 -149 338 171 0 13 chr5 159196088 159196164 -43889368 + CT-rich Low_complexity Low_complexity 4 78 0 674 234 93 28 chr5 159196299 159196513 -43889019 - MIR SINE MIR -4 258 31 586 191 93 19 chr5 159198758 159198920 -43886612 - MIR SINE MIR -71 191 18 229 329 11 98 chr5 159199567 159199844 -43885688 + L2 LINE L2 2924 3176 -96 463 288 82 62 chr5 159200100 159200357 -43885175 - L2 LINE L2 -1 3271 3010 1192 189 48 58 chr5 159200361 159200890 -43884642 + MLT1C LTR MaLR 1 467 0 243 368 11 0 chr5 159203775 159203862 -43881670 - MIR SINE MIR -76 132 45 1132 276 114 17 chr5 159203879 159204419 -43881113 + L2 LINE L2 2700 3311 -2 491 277 60 36 chr5 159205581 159205747 -43879785 + MIR SINE MIR 80 249 -13 2203 86 4 11 chr5 159205755 159206068 -43879464 - AluSc SINE Alu 0 311 1 348 310 236 10 chr5 159206275 159206349 -43879183 + MIR SINE MIR 4 60 -202 1666 199 30 7 chr5 159206349 159206530 -43879002 - AluJb SINE Alu -2 310 118 199 71 48 0 chr5 159206530 159206572 -43878960 + T-rich Low_complexity Low_complexity 2 45 0 1666 199 30 7 chr5 159206572 159206691 -43878841 - AluJb SINE Alu -194 118 3 348 310 236 10 chr5 159206691 159206819 -43878713 + MIR SINE MIR 60 252 -10 2333 104 7 0 chr5 159206838 159207135 -43878397 + AluSq SINE Alu 1 299 -14 2499 80 0 3 chr5 159207185 159207497 -43878035 + AluY SINE Alu 1 311 0 247 240 84 53 chr5 159207497 159207624 -43877908 + MIR SINE MIR 45 183 -79 362 320 66 28 chr5 159207678 159207878 -43877654 + MIR SINE MIR 8 212 -50 180 286 0 0 chr5 159208060 159208109 -43877423 - L2 LINE L2 0 3272 3224 203 170 21 0 chr5 159209309 159209356 -43876176 + CT-rich Low_complexity Low_complexity 2 49 0 223 167 17 33 chr5 159209783 159209843 -43875689 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 515 283 60 0 chr5 159210311 159210477 -43875055 + MIR SINE MIR 81 256 -6 333 349 7 11 chr5 159211448 159211627 -43873905 + GA-rich Low_complexity Low_complexity 1 178 0 397 322 126 22 chr5 159211740 159211923 -43873609 + L2 LINE L2 3109 3310 -3 217 204 140 75 chr5 159212123 159212216 -43873316 + MER5A DNA MER1_type 90 188 -1 471 18 0 0 chr5 159212290 159212346 -43873186 + (TG)n Simple_repeat Simple_repeat 2 57 0 405 0 0 0 chr5 159212428 159212473 -43873059 + (CA)n Simple_repeat Simple_repeat 2 46 0 462 296 100 62 chr5 159213055 159213444 -43872088 + L2 LINE L2 2845 3248 -24 582 312 69 62 chr5 159213468 159214180 -43871352 - L2 LINE L2 0 3313 2584 248 289 0 0 chr5 159214659 159214711 -43870821 + polypurine Low_complexity Low_complexity 1 52 0 290 229 66 0 chr5 159215532 159215593 -43869939 + L2 LINE L2 3242 3306 -7 379 348 15 22 chr5 159216263 159216398 -43869134 - L2 LINE L2 -5 3267 3134 240 224 0 0 chr5 159216463 159216512 -43869020 - L2 LINE L2 0 3313 3265 290 258 0 0 chr5 159217293 159217355 -43868177 + MIR3 SINE MIR 116 177 -31 184 330 22 22 chr5 159217713 159217804 -43867728 + MIR SINE MIR 117 207 -55 679 281 65 26 chr5 159218139 159218370 -43867162 + MIR SINE MIR 17 256 -6 314 318 18 9 chr5 159218554 159218664 -43866868 + MIR SINE MIR 37 147 -61 260 334 90 12 chr5 159218667 159219135 -43866397 + L1MC5 LINE L1 7200 7534 -427 237 264 190 0 chr5 159219226 159219468 -43866064 + L1ME4a LINE L1 5830 6117 -4 287 237 144 0 chr5 159219482 159219579 -43865953 + MIR SINE MIR 136 246 -16 262 264 111 0 chr5 159222486 159222558 -43862974 - L2 LINE L2 -35 3237 3158 184 330 91 0 chr5 159222948 159223036 -43862496 - MIR SINE MIR -68 194 99 410 299 0 56 chr5 159223124 159223268 -43862264 + MIR3 SINE MIR 60 195 -13 206 277 10 30 chr5 159223969 159224070 -43861462 + C-rich Low_complexity Low_complexity 3 101 0 549 279 73 0 chr5 159224368 159224547 -43860985 + MIR SINE MIR 50 241 -21 297 225 119 20 chr5 159226269 159226387 -43859145 + MIR SINE MIR 29 156 -62 672 237 62 49 chr5 159226410 159226447 -43859085 - MIR SINE MIR -29 233 198 1461 134 137 39 chr5 159226447 159226731 -43858801 - AluJb SINE Alu 0 312 1 672 237 62 49 chr5 159226731 159226917 -43858615 - MIR SINE MIR -64 198 7 238 222 0 121 chr5 159226942 159226984 -43858548 + MIR SINE MIR 176 201 -61 2191 98 3 0 chr5 159226984 159227280 -43858252 + AluSp SINE Alu 1 297 -16 238 222 0 121 chr5 159227280 159227336 -43858196 + MIR SINE MIR 201 262 0 219 114 0 0 chr5 159228531 159228566 -43856966 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 286 246 29 0 chr5 159228567 159228636 -43856896 - L2 LINE L2 -10 3303 3233 414 0 0 0 chr5 159228904 159228950 -43856582 + (TG)n Simple_repeat Simple_repeat 2 47 0 647 225 160 19 chr5 159230270 159230483 -43855049 + MIR SINE MIR 2 244 -18 293 293 170 0 chr5 159230639 159230786 -43854746 + MIR3 SINE MIR 33 204 -4 848 288 17 4 chr5 159231826 159232059 -43853473 + MIR SINE MIR 19 254 -8 289 363 42 8 chr5 159232315 159232494 -43853038 + MER5B DNA MER1_type 5 178 0 616 237 129 5 chr5 159232684 159232901 -43852631 - MIR SINE MIR 0 262 21 519 222 16 8 chr5 159232899 159233025 -43852507 - MIR SINE MIR -60 148 22 * 476 273 139 0 chr5 159233519 159233691 -43851841 + MIR SINE MIR 2 197 -65 593 286 133 57 chr5 159234018 159234350 -43851182 + L2 LINE L2 2916 3272 0 224 128 0 21 chr5 159234350 159234397 -43851135 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 711 262 3 113 chr5 159234599 159234881 -43850651 - MIR SINE MIR -10 252 2 1960 181 67 3 chr5 159237205 159237547 -43847985 - MLT1A1 LTR MaLR 0 365 2 752 256 15 5 chr5 159237581 159237780 -43847752 + MIR SINE MIR 2 202 -60 226 316 132 20 chr5 159238738 159238890 -43846642 + MIR SINE MIR 92 260 -2 367 282 18 18 chr5 159239335 159239505 -43846027 + (TCTCTG)n Simple_repeat Simple_repeat 4 173 0 220 292 117 0 chr5 159240827 159240947 -43844585 - MIR SINE MIR -15 247 114 231 274 0 71 chr5 159240957 159241041 -43844491 - MIR SINE MIR -46 162 84 554 254 86 55 chr5 159242061 159242273 -43843259 + L2 LINE L2 2782 2992 -321 1304 135 60 34 chr5 159242273 159242403 -43843129 + ORSL DNA AcHobo 2 127 -148 2067 125 13 3 chr5 159242403 159242708 -43842824 + AluSx SINE Alu 1 308 -4 1304 135 60 34 chr5 159242708 159242844 -43842688 + ORSL DNA AcHobo 127 275 0 554 254 86 55 chr5 159242844 159242892 -43842640 + L2 LINE L2 2992 3037 -276 234 111 0 0 chr5 159242892 159242928 -43842604 + MER1B DNA MER1_type 1 36 -301 * 1604 97 20 48 chr5 159242924 159243172 -43842360 + MER1B DNA MER1_type 99 339 0 639 186 86 59 chr5 159243172 159243220 -43842312 + L2 LINE L2 3030 3075 -238 1677 138 20 34 chr5 159243220 159243516 -43842016 + AluJo SINE Alu 1 292 -20 639 186 86 59 chr5 159243516 159243688 -43841844 + L2 LINE L2 3075 3256 -57 298 255 153 0 chr5 159243856 159243954 -43841578 + MIR SINE MIR 96 208 -54 208 194 0 0 chr5 159244076 159244112 -43841420 + L2 LINE L2 3267 3302 -11 561 322 127 36 chr5 159244202 159244777 -43840755 - L2 LINE L2 -6 3307 2682 22 70 0 0 chr5 159244781 159244824 -43840708 + AT_rich Low_complexity Low_complexity 1 43 0 511 233 25 74 chr5 159244852 159244930 -43840602 - MER117 DNA MER1_type -1 196 129 1194 185 0 0 chr5 159244930 159245119 -43840413 + MER5A DNA MER1_type 1 189 0 511 233 25 74 chr5 159245119 159245203 -43840329 - MER117 DNA MER1_type -68 129 42 354 282 28 41 chr5 159245310 159245462 -43840070 + MIR SINE MIR 6 146 -62 561 296 130 27 chr5 159246114 159246415 -43839117 + L2 LINE L2 2962 3293 -20 597 327 29 10 chr5 159246420 159246628 -43838904 - MIR SINE MIR -23 239 28 201 276 23 35 chr5 159247527 159247614 -43837918 + CT-rich Low_complexity Low_complexity 2 87 0 207 0 0 0 chr5 159247725 159247748 -43837784 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 899 203 68 0 chr5 159248401 159248578 -43836954 - MER5A DNA MER1_type 0 189 1 721 213 0 0 chr5 159249326 159249462 -43836070 - L2 LINE L2 0 3272 3137 596 303 62 25 chr5 159249724 159249965 -43835567 - MIR SINE MIR -1 261 12 363 301 117 10 chr5 159250701 159250896 -43834636 - MIR SINE MIR 0 262 46 270 0 0 0 chr5 159251535 159251565 -43833967 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 272 210 0 65 chr5 159251587 159251649 -43833883 - L2 LINE L2 -18 3295 3238 355 242 74 47 chr5 159251739 159251888 -43833644 + MIR3 SINE MIR 41 193 -15 326 220 279 8 chr5 159252143 159252263 -43833269 - MIR SINE MIR -52 156 16 497 303 112 0 chr5 159252851 159253029 -43832503 + MIR SINE MIR 21 218 -44 355 341 69 23 chr5 159253441 159253614 -43831918 - MIR SINE MIR -78 184 4 483 294 40 40 chr5 159253628 159253805 -43831727 - MIR SINE MIR -7 255 79 346 274 20 0 chr5 159254444 159254546 -43830986 + MIR SINE MIR 20 123 -85 874 167 0 0 chr5 159254562 159254694 -43830838 + FLAM_A SINE Alu 2 133 0 298 277 119 117 chr5 159254782 159255125 -43830407 - L2 LINE L2 -5 3267 2924 203 256 0 0 chr5 159255431 159255474 -43830058 + (CA)n Simple_repeat Simple_repeat 2 44 0 187 167 0 37 chr5 159255744 159255798 -43829734 + CT-rich Low_complexity Low_complexity 3 54 0 356 319 31 12 chr5 159256372 159256535 -43828997 + L2 LINE L2 2631 2796 -518 258 345 50 7 chr5 159256567 159256706 -43828826 + L2 LINE L2 2914 3058 -214 547 277 82 33 chr5 159256947 159257131 -43828401 - MIR SINE MIR 0 262 70 848 235 51 17 chr5 159257946 159258180 -43827352 - MIR SINE MIR 0 262 21 1760 167 7 13 chr5 159258210 159258515 -43827017 - AluJo SINE Alu -7 305 3 343 224 22 27 chr5 159258530 159258652 -43826880 + MIR SINE MIR 101 219 -43 1555 272 63 19 chr5 159258722 159259537 -43825995 - L2 LINE L2 -24 3289 2441 2193 101 3 0 chr5 159259590 159259888 -43825644 + AluSc SINE Alu 1 299 -10 229 331 30 94 chr5 159260021 159260392 -43825140 + L2 LINE L2 2831 3177 -95 297 241 0 36 chr5 159260480 159260563 -43824969 + L2 LINE L2 3234 3313 0 525 216 128 7 chr5 159260576 159260724 -43824808 + MIR SINE MIR 87 252 -10 308 241 0 35 chr5 159260757 159260844 -43824688 + C-rich Low_complexity Low_complexity 3 86 0 2213 114 0 28 chr5 159261416 159261733 -43823799 + AluSx SINE Alu 1 308 -4 519 274 48 7 chr5 159261804 159261950 -43823582 + MIR SINE MIR 49 200 -62 2470 81 7 0 chr5 159263319 159263617 -43821915 - AluSq SINE Alu -13 300 1 2138 114 0 29 chr5 159265089 159265396 -43820136 - AluSx SINE Alu -14 298 1 2354 110 0 0 chr5 159265677 159265985 -43819547 + AluSx SINE Alu 1 308 -4 721 269 204 4 chr5 159266091 159266370 -43819162 + L2 LINE L2 2916 3250 -22 467 188 79 0 chr5 159266745 159266846 -43818686 - MIR SINE MIR -17 245 137 306 219 9 95 chr5 159267076 159267181 -43818351 - L1MC4a LINE L1 -1897 5911 5816 555 295 0 7 chr5 159267184 159267333 -43818199 - MIR SINE MIR -113 149 2 197 260 52 26 chr5 159267727 159267804 -43817728 + MIR SINE MIR 38 116 -92 211 188 203 14 chr5 159268162 159268231 -43817301 - MIR3 SINE MIR -40 168 87 403 287 52 37 chr5 159268251 159268387 -43817145 + MIR SINE MIR 111 248 -14 788 209 19 0 chr5 159268431 159268589 -43816943 - MER5B DNA MER1_type -17 161 1 292 266 116 89 chr5 159268651 159268910 -43816622 + L2 LINE L2 2615 2880 -434 2061 104 22 0 chr5 159268936 159269231 -43816301 - AluSx SINE Alu 0 310 10 684 299 41 41 chr5 159269237 159269381 -43816151 + L2 LINE L2 2997 3140 -173 2124 110 0 40 chr5 159269381 159269714 -43815818 - AluSx SINE Alu 0 312 1 684 299 41 41 chr5 159269714 159269883 -43815649 + L2 LINE L2 3139 3310 -3 484 279 43 0 chr5 159270563 159270703 -43814829 - MIR SINE MIR -32 230 85 210 221 151 47 chr5 159270965 159271051 -43814481 - MIR3 SINE MIR -5 203 109 243 188 0 0 chr5 159271313 159271361 -43814171 + CT-rich Low_complexity Low_complexity 2 49 0 482 271 16 58 chr5 159272184 159272372 -43813160 + MIR SINE MIR 13 192 -70 447 247 0 0 chr5 159272528 159272621 -43812911 + MIR SINE MIR 53 145 -63 211 197 26 53 chr5 159274385 159274461 -43811071 + GA-rich Low_complexity Low_complexity 1 74 0 375 244 206 0 chr5 159275172 159275303 -43810229 + MIR SINE MIR 95 252 -10 611 249 134 10 chr5 159275534 159275743 -43809789 + MIR SINE MIR 16 250 -12 246 369 57 11 chr5 159275836 159276099 -43809433 + L3 LINE CR1 1012 1286 -291 267 322 132 0 chr5 159276146 159276267 -43809265 + L3 LINE CR1 1405 1541 -36 311 346 6 22 chr5 159276554 159276736 -43808796 + GA-rich Low_complexity Low_complexity 1 179 0 479 272 139 6 chr5 159277556 159277729 -43807803 - MIR SINE MIR -6 256 61 475 225 176 0 chr5 159278125 159278267 -43807265 + MIR SINE MIR 79 245 -17 239 267 9 67 chr5 159278343 159278448 -43807084 - L2 LINE L2 0 3272 3174 1284 134 18 9 chr5 159279575 159279792 -43805740 - MER20 DNA MER1_type 0 219 1 189 74 0 0 chr5 159279911 159279938 -43805594 + (GGA)n Simple_repeat Simple_repeat 3 29 0 2357 95 3 13 chr5 159280208 159280523 -43805009 - AluSx SINE Alu 0 312 1 1870 158 24 3 chr5 159280527 159280818 -43804714 - AluJo SINE Alu -15 297 1 719 256 51 34 chr5 159280916 159281150 -43804382 - MIR SINE MIR -14 248 11 208 245 57 0 chr5 159281187 159281240 -43804292 + L2 LINE L2 3209 3264 -8 248 346 110 15 chr5 159282839 159282975 -43802557 + MIR SINE MIR 13 161 -101 560 198 97 68 chr5 159282980 159283160 -43802372 - MIR SINE MIR -4 258 70 801 124 0 23 chr5 159283160 159283289 -43802243 - FLAM_A SINE Alu -7 126 1 560 198 97 68 chr5 159283289 159283315 -43802217 - MIR SINE MIR -192 70 46 352 319 84 5 chr5 159284447 159284660 -43800872 - L3 LINE CR1 -113 1464 1235 1842 160 7 3 chr5 159284787 159285075 -43800457 + AluSx SINE Alu 12 300 -12 2208 126 3 0 chr5 159285288 159285582 -43799950 + AluSx SINE Alu 1 295 -17 2195 82 4 0 chr5 159285582 159285850 -43799682 + AluSp SINE Alu 1 269 -44 282 56 0 0 chr5 159285870 159285906 -43799626 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 1053 68 37 0 chr5 159285906 159286067 -43799465 + (GAAA)n Simple_repeat Simple_repeat 4 170 0 228 368 17 0 chr5 159286086 159286203 -43799329 - L2 LINE L2 -337 2976 2858 748 296 107 14 chr5 159286345 159286700 -43798832 + L2 LINE L2 2926 3313 0 664 231 73 51 chr5 159287469 159287703 -43797829 - MIR SINE MIR -3 259 21 227 361 0 0 chr5 159287728 159287825 -43797707 - L2 LINE L2 -252 3020 2924 2185 99 0 3 chr5 159287860 159288162 -43797370 - AluSx SINE Alu 0 301 1 2482 73 10 0 chr5 159288191 159288493 -43797039 + AluSp SINE Alu 1 305 -8 218 119 24 0 chr5 159288523 159288565 -43796967 + A-rich Low_complexity Low_complexity 3 45 0 195 320 33 80 chr5 159289168 159289318 -43796214 - L3 LINE CR1 -1096 481 339 712 231 62 0 chr5 159290408 159290568 -43794964 + MIR SINE MIR 3 172 -90 208 225 258 25 chr5 159290649 159290769 -43794763 + MIR3 SINE MIR 16 163 -45 478 248 68 15 chr5 159291788 159291921 -43793611 - MIR SINE MIR -115 147 8 204 276 0 0 chr5 159292633 159292691 -43792841 + CT-rich Low_complexity Low_complexity 6 63 0 243 140 0 0 chr5 159292758 159292808 -43792724 + (TG)n Simple_repeat Simple_repeat 2 51 0 340 320 86 40 chr5 159293358 159293533 -43791999 + MIR SINE MIR 21 203 -59 364 323 15 0 chr5 159294405 159294535 -43790997 - MIR SINE MIR -99 163 32 761 316 17 4 chr5 159295448 159295682 -43789850 - MIR SINE MIR -6 256 20 582 233 171 5 chr5 159295759 159295969 -43789563 + L1MC/D LINE L1 5574 5818 -1990 1512 115 14 0 chr5 159295976 159296184 -43789348 + AluSx SINE Alu 2 212 -100 309 143 0 32 chr5 159296184 159296240 -43789292 + FLAM_A SINE Alu 77 132 -170 1700 147 0 82 chr5 159296242 159296387 -43789145 + AluJo SINE Alu 1 110 -202 2233 115 10 0 chr5 159296387 159296691 -43788841 + AluSx SINE Alu 1 307 -5 1700 147 0 82 chr5 159296691 159296851 -43788681 + AluJo SINE Alu 110 281 -31 183 114 0 0 chr5 159296851 159296886 -43788646 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 209 161 16 65 chr5 159297260 159297302 -43788230 + CT-rich Low_complexity Low_complexity 2 42 -18 2313 102 0 19 chr5 159297302 159297615 -43787917 - AluSx SINE Alu -5 307 1 209 161 16 65 chr5 159297615 159297634 -43787898 + CT-rich Low_complexity Low_complexity 42 60 0 1197 271 104 2 chr5 159297645 159297959 -43787573 - MLT1K LTR MaLR -12 576 209 2391 105 0 0 chr5 159297959 159298264 -43787268 - AluSg SINE Alu -5 305 1 1197 271 104 2 chr5 159298264 159298363 -43787169 - MLT1K LTR MaLR -379 209 121 183 220 0 0 chr5 159298652 159298702 -43786830 + GA-rich Low_complexity Low_complexity 2 51 0 217 267 125 58 chr5 159299388 159299508 -43786024 + MIR3 SINE MIR 33 160 -48 326 268 19 2 chr5 159299514 159299669 -43785863 - MER117 DNA MER1_type -7 190 1 2069 146 0 37 chr5 159300581 159300902 -43784630 + AluJo SINE Alu 1 309 -3 517 209 8 8 chr5 159300902 159301036 -43784496 + GA-rich Low_complexity Low_complexity 1 134 0 478 208 208 34 chr5 159301061 159301184 -43784348 + MIR SINE MIR 46 146 -116 2305 90 28 0 chr5 159301184 159301473 -43784059 + AluSx SINE Alu 1 297 -15 478 208 208 34 chr5 159301473 159301527 -43784005 + MIR SINE MIR 146 254 -8 650 296 100 4 chr5 159302380 159302610 -43782922 + MIR SINE MIR 7 258 -4 250 291 128 28 chr5 159304151 159304292 -43781240 + MIR3 SINE MIR 11 165 -43 250 382 18 0 chr5 159304409 159304519 -43781013 + L2 LINE L2 3202 3313 0 2491 76 0 3 chr5 159304621 159304922 -43780610 + AluSc SINE Alu 1 300 -9 398 306 21 28 chr5 159304930 159305074 -43780458 + MIR SINE MIR 47 189 -73 491 195 234 0 chr5 159305203 159305357 -43780175 + MIR SINE MIR 73 262 0 328 280 129 16 chr5 159306021 159306207 -43779325 + MIR SINE MIR 36 242 -20 2507 93 0 0 chr5 159306786 159307098 -43778434 - AluSx SINE Alu 0 312 1 305 221 177 9 chr5 159307271 159307384 -43778148 + MIR SINE MIR 73 204 -58 341 22 22 0 chr5 159307836 159307882 -43777650 + (TG)n Simple_repeat Simple_repeat 2 48 0 294 301 53 38 chr5 159308429 159308562 -43776970 + L2 LINE L2 3179 3313 0 301 228 10 10 chr5 159308626 159308727 -43776805 + GA-rich Low_complexity Low_complexity 2 102 0 557 256 38 57 chr5 159309434 159309645 -43775887 + MIR SINE MIR 56 262 0 468 0 0 0 chr5 159309967 159310019 -43775513 + (TG)n Simple_repeat Simple_repeat 2 53 0 463 258 123 13 chr5 159312260 159312415 -43773117 - MIR SINE MIR -1 261 90 232 89 22 22 chr5 159313376 159313421 -43772111 + (TCTCCC)n Simple_repeat Simple_repeat 4 48 0 2048 98 63 11 chr5 159314006 159314173 -43771359 - AluSp SINE Alu -13 300 143 210 37 0 0 chr5 159314173 159314200 -43771332 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2492 42 0 3 chr5 159314200 159314483 -43771049 - AluY SINE Alu -29 282 1 2048 98 63 11 chr5 159314483 159314599 -43770933 - AluSp SINE Alu -169 144 1 402 127 0 0 chr5 159314796 159314859 -43770673 - Alu SINE Alu 0 302 240 655 260 62 51 chr5 159314872 159315145 -43770387 + L2 LINE L2 3033 3308 -5 478 248 87 25 chr5 159315156 159315317 -43770215 - MIR SINE MIR -65 197 27 2339 107 0 0 chr5 159315334 159315632 -43769900 - AluSg SINE Alu -12 298 1 356 312 144 41 chr5 159315898 159316238 -43769294 + L2 LINE L2 2898 3272 0 1540 184 6 52 chr5 159317887 159318214 -43767318 + AluJb SINE Alu 1 312 0 584 142 209 34 chr5 159318215 159318363 -43767169 + AluJo/FRAM SINE Alu 129 302 -10 490 224 91 0 chr5 159318363 159318506 -43767026 + L1ME1 LINE L1 5049 5204 -942 843 230 17 6 chr5 159318506 159318680 -43766852 + FRAM SINE Alu 1 40 0 208 211 0 0 chr5 159318692 159318730 -43766802 + GA-rich Low_complexity Low_complexity 3 40 0 2348 202 79 52 chr5 159318770 159318878 -43766654 + L1ME1 LINE L1 5317 5421 -745 2213 121 0 0 chr5 159318878 159319194 -43766338 + AluSq SINE Alu 1 316 0 2348 202 79 52 chr5 159319194 159319834 -43765698 + L1ME1 LINE L1 5421 6087 -79 379 227 0 0 chr5 159320613 159320688 -43764844 + L3 LINE CR1 1492 1566 -11 27 49 0 0 chr5 159322197 159322238 -43763294 + AT_rich Low_complexity Low_complexity 1 41 0 2253 84 13 27 chr5 159322247 159322568 -43762964 + AluSx SINE Alu 1 317 0 1116 252 0 16 chr5 159322568 159322826 -43762706 - MIR SINE MIR -8 254 1 245 306 13 38 chr5 159323141 159323298 -43762234 + GA-rich Low_complexity Low_complexity 3 155 0 195 42 0 0 chr5 159323343 159323367 -43762165 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 1471 132 81 21 chr5 159323453 159323688 -43761844 - AluJb SINE Alu -63 249 1 263 106 0 191 chr5 159323821 159323915 -43761617 - MER5C DNA MER1_type 0 324 249 2220 93 27 7 chr5 159323921 159324221 -43761311 - AluSq SINE Alu -7 306 1 495 215 31 46 chr5 159426458 159426588 -43658944 - MLT1G1 LTR MaLR -467 128 1 2067 109 0 55 chr5 159426621 159426951 -43658581 + AluSx SINE Alu 1 312 0 211 333 12 0 chr5 159426967 159427048 -43658484 - MIR SINE MIR -5 257 176 569 213 37 0 chr5 159427213 159427321 -43658211 - L2 LINE L2 -1 3312 3201 2047 198 116 36 chr5 159427364 159427865 -43657667 + MLT1F LTR MaLR 1 541 -1 700 257 78 24 chr5 159428201 159428407 -43657125 + MIR SINE MIR 14 230 -32 2057 94 0 0 chr5 159428408 159428675 -43656857 - AluSx SINE Alu -45 267 1 2294 34 0 0 chr5 159428684 159428951 -43656581 - AluY SINE Alu -17 294 28 2326 91 0 0 chr5 159429238 159429545 -43655987 - AluSc SINE Alu -2 307 1 818 134 67 0 chr5 159429553 159429571 -43655961 - L1MB2 LINE L1 0 6171 6156 306 0 0 0 chr5 159429571 159429605 -43655927 + (CA)n Simple_repeat Simple_repeat 2 35 0 818 134 67 0 chr5 159429605 159429735 -43655797 - L1MB2 LINE L1 -15 6156 6013 839 67 0 0 chr5 159429742 159429847 -43655685 - L1MB2 LINE L1 -294 5877 5773 1993 144 65 3 chr5 159429847 159430200 -43655332 - L1MC3 LINE L1 -1332 6453 6079 309 151 0 19 chr5 159430211 159430264 -43655268 + L1MC3 LINE L1 6017 6068 -1717 1534 194 3 3 chr5 159430310 159430617 -43654915 - AluJb SINE Alu 0 307 1 801 166 0 7 chr5 159430617 159430756 -43654776 - FLAM_C SINE Alu -5 138 1 1487 132 28 106 chr5 159430766 159430962 -43654570 - L1M3 LINE L1 -586 5597 5442 2304 78 3 0 chr5 159430962 159431256 -43654276 + AluSp SINE Alu 1 295 -18 1487 132 28 106 chr5 159431256 159431419 -43654113 - L1M3 LINE L1 -741 5442 5268 803 115 0 39 chr5 159432105 159432235 -43653297 + AluJb SINE Alu 85 209 -103 1530 152 4 0 chr5 159432335 159432578 -43652954 - AluSx SINE Alu -68 244 1 381 304 206 0 chr5 159433084 159433327 -43652205 - L2 LINE L2 0 3313 3021 310 271 62 47 chr5 159433411 159433540 -43651992 - L2 LINE L2 -1065 2249 2119 1415 135 10 0 chr5 159433658 159433887 -43651645 + AluSg/x SINE Alu 72 302 0 285 81 0 0 chr5 159433933 159433970 -43651562 - L3 LINE CR1 -115 1462 1426 630 289 83 0 chr5 159434915 159435119 -43650413 + MIR SINE MIR 42 262 0 296 241 51 0 chr5 159435141 159435220 -43650312 - MIR SINE MIR -78 184 102 375 258 11 22 chr5 159435431 159435520 -43650012 + L2 LINE L2 3146 3233 -39 621 298 39 43 chr5 159435795 159436077 -43649455 - L2 LINE L2 -14 3299 3019 2189 89 0 0 chr5 159436302 159436640 -43648892 + AluSx SINE Alu 1 338 0 1973 112 0 14 chr5 159437111 159437398 -43648134 + AluSx SINE Alu 1 283 -29 1601 131 4 0 chr5 159437819 159438063 -43647469 + AluSx SINE Alu 55 299 -13 2347 79 3 3 chr5 159438068 159438371 -43647161 + AluSp SINE Alu 1 303 -10 2284 97 0 0 chr5 159438389 159438688 -43646844 + AluSg SINE Alu 1 299 -11 323 234 36 72 chr5 159439557 159439668 -43645864 + MIR SINE MIR 45 151 -111 181 292 250 0 chr5 159439669 159439741 -43645791 - L2 LINE L2 -1 3271 3182 2489 52 7 0 chr5 159439880 159440189 -43645343 + AluY SINE Alu 1 311 0 249 33 0 0 chr5 159440517 159440547 -43644985 + (T)n Simple_repeat Simple_repeat 1 30 0 230 250 31 16 chr5 159440547 159440611 -43644921 - MLT1K LTR MaLR -4 584 520 751 152 122 30 chr5 159441180 159441344 -43644188 - MER97b DNA MER1_type? -874 179 1 1428 176 4 11 chr5 159441969 159442231 -43643301 + AluJo SINE Alu 1 260 -52 215 348 14 0 chr5 159442231 159442300 -43643232 + MIR SINE MIR 53 122 -140 2246 102 0 0 chr5 159442300 159442603 -43642929 - AluSx SINE Alu -9 303 1 1161 177 33 21 chr5 159442612 159442855 -43642677 - L1MB7 LINE L1 -74 6110 5865 1549 183 12 38 chr5 159442955 159443294 -43642238 - L1MB7 LINE L1 -320 5864 5535 341 282 12 0 chr5 159443307 159443392 -43642140 + MIR SINE MIR 154 239 -23 1415 151 0 17 chr5 159443397 159443629 -43641903 - AluJb SINE Alu -84 228 1 1585 94 54 0 chr5 159443723 159443946 -43641586 - AluSg/x SINE Alu -13 299 65 320 244 51 70 chr5 159445340 159445518 -43640014 - MIR SINE MIR -12 250 75 * 738 291 125 22 chr5 159445490 159445955 -43639577 + L2 LINE L2 2691 3215 -98 387 232 78 21 chr5 159446573 159446715 -43638817 - L1ME4a LINE L1 -6 6115 5966 1103 283 52 14 chr5 159446720 159447141 -43638391 - L1ME4a LINE L1 -206 5915 5479 722 95 0 0 chr5 159448376 159448471 -43637061 + L1PA16 LINE L1 6033 6127 -39 293 190 0 0 chr5 159448596 159448654 -43636878 + Alu SINE Alu 242 299 -2 186 240 0 40 chr5 159449613 159449663 -43635869 + L2 LINE L2 3261 3308 -5 843 316 177 26 chr5 159449746 159450595 -43634937 - L2 LINE L2 -552 2762 1786 713 109 0 0 chr5 159450803 159450904 -43634628 + AluSc SINE Alu 199 299 -10 814 185 38 49 chr5 159451004 159451188 -43634344 + MER3 DNA MER1_type 25 206 -3 373 254 31 46 chr5 159451195 159451325 -43634207 + MLT1J LTR MaLR 324 451 -60 2035 85 53 0 chr5 159451349 159451632 -43633900 - AluSx SINE Alu -14 298 1 677 234 0 0 chr5 159451878 159452002 -43633530 - MLT1F1 LTR MaLR -12 555 432 1503 99 24 172 chr5 159452002 159452254 -43633278 - AluJb SINE Alu 0 342 158 2130 44 6 22 chr5 159452254 159452570 -43632962 - AluY SINE Alu 0 311 1 1503 99 24 172 chr5 159452570 159452707 -43632825 - AluJb SINE Alu -184 158 2 25 0 0 0 chr5 159452946 159452971 -43632561 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 159453708 159453738 -43631794 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 159454034 159454056 -43631476 + AT_rich Low_complexity Low_complexity 1 22 0 1196 171 38 5 chr5 159454583 159454794 -43630738 + LOR1-int LTR ERV1 6880 7097 -1023 4280 137 25 12 chr5 159454798 159455483 -43630049 + MER72 LTR ERV1 1 694 -28 763 241 123 103 chr5 159455879 159456268 -43629264 + L1MC4 LINE L1 7205 7585 -457 2308 48 10 3 chr5 159456268 159456559 -43628973 + AluY SINE Alu 2 294 -17 763 241 123 103 chr5 159456559 159456991 -43628541 + L1MC4 LINE L1 7585 8042 0 2110 108 17 0 chr5 159457720 159458016 -43627516 + AluSq SINE Alu 1 301 -12 256 310 16 54 chr5 159458771 159458900 -43626632 + L1ME LINE L1 5574 5697 -424 395 167 0 0 chr5 159460274 159460334 -43625198 - AluJ/FLAM SINE Alu -242 60 1 462 305 132 12 chr5 159460338 159460505 -43625027 - MIR SINE MIR -60 202 16 296 298 157 31 chr5 159462386 159462462 -43623070 + L2 LINE L2 3083 3148 -165 1850 152 0 13 chr5 159462462 159462778 -43622754 - AluJb SINE Alu 0 312 1 296 298 157 31 chr5 159462778 159462892 -43622640 + L2 LINE L2 3148 3297 -16 216 67 0 0 chr5 159462906 159462936 -43622596 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 876 128 0 23 chr5 159462973 159463106 -43622426 + FLAM_C SINE Alu 2 131 -2 1934 196 51 6 chr5 159463195 159463936 -43621596 + L1MD2 LINE L1 4903 5667 -692 1124 87 7 0 chr5 159463943 159464081 -43621451 + AluSq/x SINE Alu 5 143 -170 2276 108 10 7 chr5 159464081 159464388 -43621144 + AluSq SINE Alu 1 308 -5 1563 195 149 81 chr5 159464389 159464505 -43621027 + L1MD2 LINE L1 5668 5775 -584 2256 117 0 0 chr5 159464505 159464804 -43620728 + AluSx SINE Alu 5 303 -9 1563 195 149 81 chr5 159464804 159465272 -43620260 + L1MD2 LINE L1 5775 6300 -59 2113 141 0 0 chr5 159465272 159465569 -43619963 - AluSx SINE Alu -15 297 1 1563 195 149 81 chr5 159465569 159465613 -43619919 + L1MD2 LINE L1 6300 6340 -19 1151 225 18 61 chr5 159465853 159466195 -43619337 - HERV16 LTR ERVL -2889 2107 1781 961 70 0 0 chr5 159466204 159466319 -43619213 - AluSq/x SINE Alu -197 115 1 867 274 97 30 chr5 159466351 159466650 -43618882 - HERV16 LTR ERVL -3655 1341 1023 631 241 50 23 chr5 159466683 159466903 -43618629 - HERV16 LTR ERVL -4044 952 727 449 286 86 0 chr5 159467131 159467341 -43618191 - HERV16 LTR ERVL -4570 426 199 548 330 61 14 chr5 159467497 159467776 -43617756 - LTR16A LTR ERVL 0 450 159 2355 108 3 0 chr5 159468939 159469246 -43616286 - AluSx SINE Alu -4 308 1 321 226 147 0 chr5 159469303 159469405 -43616127 + MLT2F LTR ERVL 1 117 -546 1132 199 143 10 chr5 159469432 159469733 -43615799 + MLT2F LTR ERVL 254 594 -69 513 92 0 0 chr5 159469735 159469811 -43615721 + (TC)n Simple_repeat Simple_repeat 1 76 0 348 329 59 27 chr5 159469925 159470143 -43615389 - L1ME LINE L1 -349 5772 5547 268 80 9 17 chr5 159470579 159470805 -43614727 + AluSx SINE Alu 1 301 -1 1689 202 109 17 chr5 159470939 159471865 -43613667 - L1MC4 LINE L1 -383 7659 6467 569 256 158 6 chr5 159472441 159472605 -43612927 - L2 LINE L2 -627 2687 2499 2456 80 0 3 chr5 159472704 159473005 -43612527 + AluSx SINE Alu 1 300 -12 756 164 118 30 chr5 159473674 159473868 -43611664 - L1MA4A LINE L1 -1 6302 6126 2047 91 4 0 chr5 159473868 159474122 -43611410 + AluSx SINE Alu 48 302 -10 756 164 118 30 chr5 159474122 159474134 -43611398 - L1MA4A LINE L1 -177 6126 6116 817 179 0 8 chr5 159474134 159474268 -43611264 + FLAM_C SINE Alu 1 133 0 756 164 118 30 chr5 159474268 159474322 -43611210 - L1MA4A LINE L1 -187 6116 6018 703 102 0 37 chr5 159475175 159475283 -43610249 - AluSq/x SINE Alu -179 133 30 2491 92 0 0 chr5 159475986 159476291 -43609241 + AluSx SINE Alu 1 305 -7 2206 110 7 23 chr5 159476293 159476603 -43608929 + AluSp SINE Alu 2 306 -7 2292 108 3 3 chr5 159476671 159476978 -43608554 - AluSx SINE Alu -5 307 1 29 60 0 0 chr5 159477209 159477259 -43608273 + AT_rich Low_complexity Low_complexity 1 50 0 1559 176 66 7 chr5 159477352 159477641 -43607891 + AluJo SINE Alu 1 306 -6 2136 152 0 0 chr5 159477657 159477967 -43607565 - AluSx SINE Alu -2 310 1 1878 166 10 7 chr5 159478400 159478696 -43606836 - AluJb SINE Alu -14 298 2 404 347 64 18 chr5 159478782 159479001 -43606531 + MIR SINE MIR 24 252 -10 782 199 0 0 chr5 159479022 159479158 -43606374 + FLAM_C SINE Alu 2 137 -6 315 250 113 75 chr5 159479519 159479679 -43605853 - MARNA DNA Mariner -179 407 242 331 310 106 35 chr5 159480817 159481156 -43604376 + MLT1K LTR MaLR 4 366 -222 2297 106 0 6 chr5 159481287 159481598 -43603934 - AluSg SINE Alu -1 309 1 1058 166 105 0 chr5 159482280 159482314 -43603218 + AluJo SINE Alu 90 119 -193 288 0 0 0 chr5 159482314 159482346 -43603186 + (TG)n Simple_repeat Simple_repeat 1 32 0 1058 166 105 0 chr5 159482346 159482492 -43603040 + AluJo SINE Alu 119 289 -23 286 316 145 7 chr5 159482505 159482657 -43602875 + L1MC4a LINE L1 5377 5549 -629 507 216 61 20 chr5 159482712 159482947 -43602585 + MLT1H LTR MaLR 75 389 -206 343 174 49 11 chr5 159483002 159483090 -43602442 + MLT1H LTR MaLR 452 595 0 414 280 85 59 chr5 159483090 159483275 -43602257 + L1MC4a LINE L1 5694 5893 -228 2204 83 24 3 chr5 159483275 159483565 -43601967 - AluSc SINE Alu -13 296 1 414 280 85 59 chr5 159483565 159483686 -43601846 + L1MC4a LINE L1 5893 6009 -112 255 125 0 0 chr5 159483775 159483815 -43601717 + (TCC)n Simple_repeat Simple_repeat 3 42 0 * 608 95 9 26 chr5 159483811 159483817 -43601715 + (TTCC)n Simple_repeat Simple_repeat 2 7 -108 2272 117 7 0 chr5 159483817 159484124 -43601408 - AluSg SINE Alu -1 309 1 608 95 9 26 chr5 159484124 159484233 -43601299 + (TTCC)n Simple_repeat Simple_repeat 7 115 0 311 306 100 38 chr5 159484415 159484575 -43600957 - MIR SINE MIR -73 189 20 273 297 40 0 chr5 159484677 159484751 -43600781 + MIR SINE MIR 47 123 -139 279 311 63 53 chr5 159484752 159484942 -43600590 - L2 LINE L2 -7 3306 3115 868 191 20 0 chr5 159484944 159485096 -43600436 + AluJb SINE Alu 137 291 -21 320 154 31 0 chr5 159485096 159485161 -43600371 + GA-rich Low_complexity Low_complexity 1 67 0 319 380 8 0 chr5 159485177 159485298 -43600234 + MIR SINE MIR 116 237 -25 1315 128 0 0 chr5 159487750 159487929 -43597603 + AluSg/x SINE Alu 124 302 -8 2391 97 3 0 chr5 159487937 159488247 -43597285 + AluSq SINE Alu 2 312 -1 246 254 14 14 chr5 159488314 159488385 -43597147 + GA-rich Low_complexity Low_complexity 4 74 0 626 284 69 14 chr5 159488441 159488659 -43596873 + MIR SINE MIR 31 260 -2 245 281 18 0 chr5 159489226 159489283 -43596249 + L2 LINE L2 3249 3306 -7 203 345 11 23 chr5 159489482 159489569 -43595963 + L2 LINE L2 3182 3267 -5 701 273 33 0 chr5 159489834 159490017 -43595515 - MIR SINE MIR -3 259 71 257 329 127 60 chr5 159490030 159490199 -43595333 + L2 LINE L2 2828 2984 -288 1694 128 53 108 chr5 159490199 159490247 -43595285 - THE1C LTR MaLR 0 375 326 2332 109 0 0 chr5 159490247 159490549 -43594983 - AluSx SINE Alu -10 302 1 1694 128 53 108 chr5 159490549 159490897 -43594635 - THE1C LTR MaLR -49 326 1 257 329 127 60 chr5 159490897 159491143 -43594389 + L2 LINE L2 2984 3271 -1 2128 127 3 10 chr5 159491937 159492237 -43593295 - AluJo SINE Alu -14 298 1 22 56 0 0 chr5 159493346 159493382 -43592150 + AT_rich Low_complexity Low_complexity 1 36 0 2274 105 0 0 chr5 159493390 159493685 -43591847 + AluSg SINE Alu 1 295 -15 2215 124 3 0 chr5 159493947 159494246 -43591286 - AluSx SINE Alu -12 300 1 386 266 167 18 chr5 159494417 159494598 -43590934 + MIR SINE MIR 4 202 -27 1635 167 0 0 chr5 159495259 159495499 -43590033 + AluJb SINE Alu 39 278 -34 245 309 0 36 chr5 159495506 159495616 -43589916 + L1MC4 LINE L1 7217 7322 -720 2297 97 0 13 chr5 159495760 159496060 -43589472 - AluSg SINE Alu -14 296 1 27 0 0 0 chr5 159496071 159496098 -43589434 + AT_rich Low_complexity Low_complexity 1 27 0 2100 125 0 10 chr5 159497945 159498242 -43587290 - AluSx SINE Alu -18 294 1 1987 155 0 31 chr5 159498288 159498610 -43586922 - AluJo SINE Alu 0 312 1 2579 98 28 94 chr5 159498671 159499080 -43586452 + MSTA LTR MaLR 1 378 -50 2437 92 3 0 chr5 159499080 159499384 -43586148 - AluSc SINE Alu -4 305 1 2579 98 28 94 chr5 159499384 159499432 -43586100 + MSTA LTR MaLR 378 428 0 539 168 92 59 chr5 159499454 159499558 -43585974 + MER39 LTR ERV1 3 113 -594 2391 88 3 3 chr5 159499558 159499865 -43585667 - AluY SINE Alu -4 307 1 539 168 92 59 chr5 159499865 159499879 -43585653 + MER39 LTR ERV1 113 125 -582 1221 198 106 55 chr5 159499882 159500048 -43585484 + MER39 LTR ERV1 340 496 -211 1586 168 52 0 chr5 159500048 159500350 -43585182 + AluSx SINE Alu 1 316 0 1221 198 106 55 chr5 159500350 159500379 -43585153 + MER39 LTR ERV1 496 522 -185 2283 87 27 0 chr5 159500379 159500677 -43584855 - AluSp SINE Alu -6 307 2 1221 198 106 55 chr5 159500677 159500827 -43584705 + MER39 LTR ERV1 522 705 -2 434 311 50 12 chr5 159501189 159501350 -43584182 + MIR SINE MIR 2 168 -94 304 302 93 23 chr5 159502010 159502139 -43583393 + L1ME4a LINE L1 5772 5909 -212 1530 173 91 40 chr5 159502140 159502492 -43583040 + MLT1A2 LTR MaLR 1 370 -4 448 218 102 14 chr5 159502565 159502712 -43582820 + L1ME4a LINE L1 5947 6106 -15 2474 88 3 0 chr5 159503349 159503655 -43581877 - AluSp SINE Alu -6 307 1 200 35 35 0 chr5 159503879 159503908 -43581624 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 201 147 0 0 chr5 159503917 159503951 -43581581 + (T)n Simple_repeat Simple_repeat 1 34 0 1200 120 6 22 chr5 159505028 159505211 -43580321 - AluSg/x SINE Alu -11 299 120 21 0 0 0 chr5 159505312 159505333 -43580199 + AT_rich Low_complexity Low_complexity 1 21 0 558 276 168 5 chr5 159505528 159505731 -43579801 + MIR SINE MIR 26 261 -1 2525 65 0 7 chr5 159506616 159506926 -43578606 - AluY SINE Alu -3 308 1 1988 134 49 0 chr5 159506974 159507258 -43578274 - AluSx SINE Alu -12 300 3 413 288 163 7 chr5 159507329 159507482 -43578050 + MER5A DNA MER1_type 12 188 -1 313 286 185 21 chr5 159507941 159508130 -43577402 + MIR SINE MIR 41 260 -2 458 336 78 12 chr5 159508590 159508834 -43576698 + MIR SINE MIR 3 262 0 2454 48 42 0 chr5 159509088 159509377 -43576155 + AluY SINE Alu 1 301 -10 2232 116 0 0 chr5 159509384 159509685 -43575847 + AluSq SINE Alu 1 301 -12 2330 92 3 10 chr5 159510761 159511075 -43574457 + AluSq SINE Alu 1 312 -1 286 297 11 11 chr5 159511958 159512049 -43573483 - MIR SINE MIR -126 136 46 24 0 0 0 chr5 159513425 159513449 -43572083 + AT_rich Low_complexity Low_complexity 1 24 0 336 227 80 0 chr5 159514066 159514141 -43571391 - L3b LINE CR1 -80 1503 1423 2271 97 20 3 chr5 159514301 159514599 -43570933 - AluSx SINE Alu -8 304 2 21 36 0 0 chr5 159516841 159516869 -43568663 + AT_rich Low_complexity Low_complexity 1 28 0 1874 141 69 3 chr5 159517105 159517396 -43568136 + AluJb SINE Alu 1 310 -2 2449 73 0 0 chr5 159517806 159518107 -43567425 + AluSg SINE Alu 1 301 -9 797 268 95 12 chr5 159519248 159519811 -43565721 + Tigger8 DNA MER2_type 1 663 -3 225 0 0 0 chr5 159520221 159520246 -43565286 + (TGGGGG)n Simple_repeat Simple_repeat 2 26 0 939 176 32 5 chr5 159521981 159522168 -43563364 - AluJb SINE Alu -1 311 120 2517 70 0 0 chr5 159522528 159522829 -43562703 - AluY SINE Alu -10 301 1 25 0 0 0 chr5 159523042 159523067 -43562465 + AT_rich Low_complexity Low_complexity 1 25 0 189 0 0 0 chr5 159523273 159523294 -43562238 + (A)n Simple_repeat Simple_repeat 1 21 0 29 0 0 0 chr5 159523671 159523700 -43561832 + AT_rich Low_complexity Low_complexity 1 29 0 2534 84 0 0 chr5 159523951 159524260 -43561272 - AluSx SINE Alu -3 309 1 562 153 81 0 chr5 159524766 159524877 -43560655 + LTR24C LTR ERV1 516 635 0 270 278 24 0 chr5 159525163 159525289 -43560243 + L1MCc LINE L1 1342 1470 -4953 203 305 34 0 chr5 159526584 159526643 -43558889 + MIR SINE MIR 196 256 -6 234 0 0 0 chr5 159528510 159528536 -43556996 + (CAA)n Simple_repeat Simple_repeat 2 27 0 321 26 0 0 chr5 159528697 159528735 -43556797 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1578 187 33 4 chr5 159528737 159529010 -43556522 - AluJo SINE Alu -31 281 1 737 267 44 22 chr5 159529376 159529646 -43555886 - Charlie8 DNA MER1_type -2141 276 1 252 0 0 0 chr5 159529760 159529788 -43555744 + (TA)n Simple_repeat Simple_repeat 2 29 0 2227 104 33 0 chr5 159529788 159530087 -43555445 - AluSx SINE Alu -3 309 1 1801 159 7 20 chr5 159530582 159530884 -43554648 - AluJo SINE Alu -14 298 1 22 56 0 0 chr5 159531218 159531254 -43554278 + AT_rich Low_complexity Low_complexity 1 36 0 2544 52 10 3 chr5 159531257 159531564 -43553968 + AluY SINE Alu 1 309 -2 23 54 0 0 chr5 159531969 159532006 -43553526 + AT_rich Low_complexity Low_complexity 1 37 0 2389 96 3 0 chr5 159532264 159532565 -43552967 - AluSp SINE Alu -10 303 2 612 154 0 0 chr5 159532875 159532966 -43552566 - FLAM_A SINE Alu -21 121 31 550 223 165 105 chr5 159533052 159533482 -43552050 + MLT1L LTR MaLR 160 615 0 2425 57 0 10 chr5 159533498 159533797 -43551735 - AluY SINE Alu -15 296 1 218 139 23 23 chr5 159534448 159534491 -43551041 + GA-rich Low_complexity Low_complexity 1 43 0 1598 180 9 29 chr5 159535250 159535383 -43550149 + AluJb SINE Alu 1 135 -177 207 0 0 0 chr5 159535383 159535406 -43550126 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1598 180 9 29 chr5 159535406 159535588 -43549944 + AluJb SINE Alu 135 310 -2 2170 113 7 23 chr5 159535640 159535949 -43549583 - AluSx SINE Alu -8 304 1 2358 96 0 0 chr5 159535958 159536260 -43549272 - AluSq SINE Alu -11 302 1 2414 67 3 3 chr5 159537455 159537754 -43547778 + AluY SINE Alu 1 299 -12 236 161 113 0 chr5 159538131 159538193 -43547339 + L1ME4a LINE L1 5957 6025 -96 27 29 0 0 chr5 159538280 159538314 -43547218 + AT_rich Low_complexity Low_complexity 1 34 0 192 349 34 48 chr5 159538433 159538579 -43546953 + L2 LINE L2 2613 2756 -558 777 303 16 31 chr5 159539154 159539408 -43546124 + MIR SINE MIR 8 257 -5 607 239 123 0 chr5 159540998 159541241 -43544291 + L1ME4a LINE L1 5556 5828 -293 1502 117 0 5 chr5 159541242 159541448 -43544084 + AluSc SINE Alu 83 287 -22 1760 136 7 52 chr5 159541463 159541773 -43543759 + AluJo SINE Alu 1 296 -16 432 161 0 49 chr5 159542024 159542105 -43543427 - AluJo SINE Alu -18 294 218 427 143 0 88 chr5 159542104 159542195 -43543337 - AluJo SINE Alu -170 142 60 * 1981 131 54 0 chr5 159542789 159543086 -43542446 - AluSp SINE Alu 0 313 1 2189 130 0 0 chr5 159544765 159545058 -43540474 - AluSx SINE Alu -19 293 1 2135 130 0 0 chr5 159545432 159545725 -43539807 + AluSx SINE Alu 17 309 -3 2634 140 61 40 chr5 159546760 159547080 -43538452 + L1MB5 LINE L1 5286 5625 -549 1570 170 29 4 chr5 159547080 159547357 -43538175 + AluJo SINE Alu 8 291 -21 2634 140 61 40 chr5 159547357 159547608 -43537924 + L1MB5 LINE L1 5625 5869 -305 2257 56 42 7 chr5 159547618 159547902 -43537630 + AluY SINE Alu 1 294 -17 24 0 0 0 chr5 159549037 159549061 -43536471 + AT_rich Low_complexity Low_complexity 1 24 0 889 135 0 0 chr5 159549298 159549424 -43536108 + FLAM_C SINE Alu 1 126 -7 2125 125 0 0 chr5 159549469 159549766 -43535766 + AluSx SINE Alu 1 297 -15 2604 215 110 10 chr5 159549798 159550702 -43534830 + L1ME3A LINE L1 5172 6170 0 228 320 48 39 chr5 159550740 159550843 -43534689 + L2 LINE L2 3153 3256 -16 814 202 116 35 chr5 159552141 159552399 -43533133 + HAL1 LINE L1 48 326 -2181 286 122 0 0 chr5 159552408 159552449 -43533083 - 5S rRNA rRNA -80 41 1 2298 98 0 0 chr5 159552476 159552763 -43532769 + AluSx SINE Alu 1 287 -25 274 198 25 12 chr5 159552923 159553004 -43532528 + L1MC4 LINE L1 7960 8041 -1 7881 135 87 18 chr5 159553125 159554695 -43530837 + L1MC3 LINE L1 6081 7758 -27 653 249 56 75 chr5 159554698 159555003 -43530529 + AluJb SINE Alu 2 300 -2 2364 85 7 3 chr5 159555191 159555498 -43530034 + AluSc SINE Alu 1 308 -1 2081 141 0 3 chr5 159555721 159556056 -43529476 + AluSx SINE Alu 1 312 0 1829 150 31 0 chr5 159556073 159556359 -43529173 + AluSx SINE Alu 3 297 -15 258 32 0 0 chr5 159556377 159556408 -43529124 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 1152 197 154 7 chr5 159556633 159556932 -43528600 + MER2 DNA MER2_type 1 343 -1 2367 85 0 3 chr5 159557147 159557453 -43528079 + AluSq SINE Alu 1 305 -8 512 171 166 11 chr5 159558081 159558256 -43527276 + L1MC5 LINE L1 7709 7910 -51 5000 122 41 19 chr5 159558297 159559181 -43526351 + L1MB3 LINE L1 5277 6179 -4 1834 70 37 12 chr5 159559933 159560176 -43525356 - AluY SINE Alu -16 295 47 1013 148 39 0 chr5 159560180 159560335 -43525197 - AluSg/x SINE Alu -11 301 141 2212 88 3 30 chr5 159560339 159560635 -43524897 - AluSc SINE Alu -21 288 1 204 67 0 0 chr5 159560638 159560668 -43524864 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2120 110 0 0 chr5 159560672 159560945 -43524587 - AluSx SINE Alu -37 275 3 269 186 29 29 chr5 159561209 159561279 -43524253 + L1ME LINE L1 5590 5659 -462 260 258 43 0 chr5 159561313 159561406 -43524126 + L1ME LINE L1 5724 5820 -301 252 294 138 31 chr5 159561764 159561924 -43523608 + MIR SINE MIR 70 246 -16 336 320 81 73 chr5 159563547 159563891 -43521641 - L1M2 LINE L1 -5829 1020 674 324 320 120 50 chr5 159563808 159564108 -43521424 + L1M2 LINE L1 676 996 -5853 * 523 140 21 0 chr5 159564445 159564538 -43520994 + MER58 DNA MER1_type 130 224 -117 380 159 0 0 chr5 159564529 159564592 -43520940 + MER58 DNA MER1_type 2355 2417 -3 * 259 285 208 0 chr5 159564723 159564867 -43520665 - L2 LINE L2 -225 3047 2874 * 374 296 48 0 chr5 159564859 159564984 -43520548 - MIR SINE MIR -83 179 49 253 298 53 53 chr5 159565015 159565109 -43520423 + L2 LINE L2 3149 3242 -30 776 152 0 51 chr5 159565765 159565903 -43519629 + FLAM_C SINE Alu 3 133 0 218 316 140 53 chr5 159567067 159567181 -43518351 - MIR SINE MIR -118 144 21 2335 84 0 6 chr5 159567442 159567753 -43517779 + AluSp SINE Alu 1 309 -4 1665 187 67 42 chr5 159567783 159568217 -43517315 - MER65A LTR ERV1 0 445 1 1509 194 23 58 chr5 159568276 159568459 -43517073 - MER58B DNA MER1_type -2085 335 147 2130 115 0 13 chr5 159568459 159568771 -43516761 - AluSx SINE Alu -4 308 1 1509 194 23 58 chr5 159568771 159568852 -43516680 - MER58B DNA MER1_type -2273 147 65 2235 90 3 7 chr5 159568852 159569162 -43516370 + AluSc SINE Alu 1 309 0 1305 195 80 17 chr5 159569164 159569285 -43516247 + AluJo SINE Alu 1 113 -199 198 0 0 0 chr5 159569285 159569307 -43516225 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1305 195 80 17 chr5 159569307 159569472 -43516060 + AluJo SINE Alu 113 305 -7 1509 194 23 58 chr5 159569472 159569549 -43515983 - MER58B DNA MER1_type -2356 64 2 2121 119 0 0 chr5 159569725 159570027 -43515505 + AluSx SINE Alu 1 302 -10 213 196 39 0 chr5 159570118 159570169 -43515363 - L2 LINE L2 0 3313 3261 1928 124 31 10 chr5 159570302 159570593 -43514939 - AluSx SINE Alu -15 297 1 1415 179 22 14 chr5 159570595 159570638 -43514894 - L1 LINE L1 -3185 2961 2920 1438 124 169 11 chr5 159570638 159570905 -43514627 - AluSg1 SINE Alu 0 309 1 1415 179 22 14 chr5 159570905 159571180 -43514352 - L1 LINE L1 -3226 2920 2655 2404 151 174 77 chr5 159571194 159571395 -43514137 - LTR48 LTR ERV1 -16 771 591 2136 135 32 24 chr5 159571395 159571765 -43513767 + THE1C LTR MaLR 3 375 0 2404 151 174 77 chr5 159571765 159572019 -43513513 - LTR48 LTR ERV1 -196 591 363 1925 148 0 0 chr5 159572019 159572324 -43513208 - AluSx SINE Alu -3 309 5 2404 151 174 77 chr5 159572324 159572570 -43512962 - LTR48 LTR ERV1 -424 363 1 741 196 18 65 chr5 159572570 159572630 -43512902 - L1 LINE L1 -3489 2657 2596 1908 101 0 0 chr5 159572630 159572888 -43512644 + AluSg SINE Alu 39 296 -14 741 196 18 65 chr5 159572888 159573056 -43512476 - L1 LINE L1 -3550 2596 2440 182 211 123 0 chr5 159573175 159573232 -43512300 + L2 LINE L2 3218 3281 -32 289 302 70 0 chr5 159573537 159573623 -43511909 + MER91C DNA MER1_type 3 94 -46 2822 146 28 2 chr5 159573743 159574215 -43511317 + MER34C LTR ERV1 34 517 -68 767 180 0 0 chr5 159574236 159574364 -43511168 - FLAM_C SINE Alu -3 140 13 718 122 35 9 chr5 159574366 159574481 -43511051 + MER34C LTR ERV1 468 585 0 2035 96 4 4 chr5 159575016 159575326 -43510206 - AluSx SINE Alu 0 310 1 2286 80 3 0 chr5 159575524 159575824 -43509708 + AluSp SINE Alu 1 301 -12 301 313 53 20 chr5 159576179 159576329 -43509203 - MIR SINE MIR -3 259 105 1960 126 31 0 chr5 159576351 159576644 -43508888 - AluSx SINE Alu -10 302 1 413 270 72 33 chr5 159576658 159576810 -43508722 - MIR3 SINE MIR -14 194 37 1718 149 7 19 chr5 159578122 159578430 -43507102 - AluJb SINE Alu -8 304 1 703 284 8 29 chr5 159578430 159578673 -43506859 - L1ME LINE L1 -426 5695 5458 670 181 31 31 chr5 159578673 159578800 -43506732 + AluJo/FLAM SINE Alu 4 130 -172 2117 104 0 22 chr5 159578802 159579119 -43506413 + AluY SINE Alu 1 310 -1 650 285 88 64 chr5 159579154 159579307 -43506225 - L1ME LINE L1 -838 5308 5160 2155 120 0 0 chr5 159579307 159579607 -43505925 - AluSx SINE Alu -10 302 3 650 285 88 64 chr5 159579607 159579860 -43505672 - L1ME LINE L1 -986 5160 4892 2147 106 3 34 chr5 159579911 159580232 -43505300 - AluSx SINE Alu -1 311 1 663 122 17 9 chr5 159580430 159580545 -43504987 - L1MB8 LINE L1 -9 6169 6054 548 133 53 88 chr5 159580563 159580676 -43504856 + LTR54 LTR ERV1 75 183 -327 624 238 13 69 chr5 159580701 159580834 -43504698 + LTR54 LTR ERV1 292 408 -102 1275 203 29 64 chr5 159580834 159581145 -43504387 - AluJo SINE Alu -2 300 1 624 238 13 69 chr5 159581145 159581242 -43504290 + LTR54 LTR ERV1 408 509 -1 605 210 25 0 chr5 159581266 159581385 -43504147 - L1MB8 LINE L1 -239 5935 5814 2544 180 20 4 chr5 159581385 159581873 -43503659 - L1MB5 LINE L1 0 6174 5679 2105 107 0 10 chr5 159581997 159582297 -43503235 - AluSx SINE Alu -15 297 1 894 159 0 0 chr5 159582406 159582538 -43502994 + FLAM_C SINE Alu 2 133 0 203 320 20 0 chr5 159582834 159582884 -43502648 + L2 LINE L2 3143 3193 -79 3960 75 22 20 chr5 159583426 159583973 -43501559 + LTR14 LTR ERVK 1 548 0 244 277 118 0 chr5 159584769 159584888 -43500644 - MER117 DNA MER1_type -36 161 29 335 225 71 104 chr5 159585416 159585598 -43499934 - L1ME4a LINE L1 -197 5924 5749 347 291 145 0 chr5 159586200 159586317 -43499215 + MIR SINE MIR 70 203 -59 373 239 23 8 chr5 159586369 159586499 -43499033 + HAL1b LINE L1 1189 1320 -28 1448 187 6 44 chr5 159586709 159587025 -43498507 - AluJo SINE Alu -8 304 1 2029 119 3 0 chr5 159587110 159587405 -43498127 - AluSg SINE Alu -12 298 3 1618 178 10 13 chr5 159587408 159587717 -43497815 - AluJb SINE Alu -4 308 1 209 291 18 0 chr5 159587741 159587796 -43497736 + MIR SINE MIR 89 144 -64 447 189 63 11 chr5 159588042 159588137 -43497395 + AluJo SINE Alu 121 220 -92 2143 138 32 35 chr5 159588256 159588632 -43496900 - THE1C LTR MaLR 0 375 1 305 294 119 23 chr5 159588793 159588970 -43496562 + MLT1J LTR MaLR 314 507 -4 380 260 20 10 chr5 159588970 159589070 -43496462 + MIR SINE MIR 152 252 -10 2293 95 0 0 chr5 159589114 159589419 -43496113 + AluSx SINE Alu 2 306 -6 2282 91 3 0 chr5 159589426 159589733 -43495799 + AluSq SINE Alu 1 308 -5 602 188 36 9 chr5 159589848 159589960 -43495572 - L2 LINE L2 -8 3305 3191 1563 191 111 32 chr5 159590082 159590577 -43494955 + MER67B LTR ERV1 1 407 -254 523 274 79 32 chr5 159590555 159590778 -43494754 + MER67D LTR ERV1 282 543 0 * 245 346 31 8 chr5 159590778 159590908 -43494624 - L2 LINE L2 -286 3027 2895 633 149 16 170 chr5 159590965 159591035 -43494497 - MER69A DNA AcHobo -2352 174 149 2300 90 0 0 chr5 159591035 159591347 -43494185 + AluSx SINE Alu 1 312 0 633 149 16 170 chr5 159591347 159591464 -43494068 - MER69A DNA AcHobo -2377 149 16 2271 121 6 35 chr5 159591817 159592164 -43493368 - MER1B DNA MER1_type 0 337 1 1486 151 53 38 chr5 159592407 159592588 -43492944 - MER33 DNA MER1_type -2261 324 134 2138 97 7 3 chr5 159592588 159592886 -43492646 - AluSx SINE Alu -13 299 1 1486 151 53 38 chr5 159592886 159593023 -43492509 - MER33 DNA MER1_type -2451 134 1 198 71 0 0 chr5 159593325 159593353 -43492179 + (CA)n Simple_repeat Simple_repeat 1 28 0 801 295 26 4 chr5 159593782 159594009 -43491523 - MIR SINE MIR -2 260 29 2149 126 0 0 chr5 159594705 159595014 -43490518 + AluSx SINE Alu 1 309 -3 203 167 0 28 chr5 159595018 159595054 -43490478 - MIR SINE MIR -11 251 217 1939 129 14 0 chr5 159595071 159595357 -43490175 - AluSx SINE Alu -22 290 1 6278 75 31 36 chr5 159595382 159597204 -43488328 + SVA Other Other 17 1386 0 491 241 52 0 chr5 159597814 159597930 -43487602 - L2 LINE L2 -1 3312 3191 202 162 0 0 chr5 159598039 159598076 -43487456 - L2 LINE L2 0 3313 3277 1659 198 46 69 chr5 159598148 159598597 -43486935 - MER34B LTR ERV1 0 565 126 608 220 15 8 chr5 159598597 159598729 -43486803 + FLAM_A SINE Alu 1 133 0 1659 198 46 69 chr5 159598729 159598760 -43486772 - MER34B LTR ERV1 -439 126 96 1239 192 119 58 chr5 159598760 159599001 -43486531 - MLT1A1 LTR MaLR 0 365 95 1602 137 245 26 chr5 159599001 159599352 -43486180 + MSTA LTR MaLR 1 428 0 1239 192 119 58 chr5 159599352 159599454 -43486078 - MLT1A1 LTR MaLR -270 95 1 424 214 45 27 chr5 159599455 159599567 -43485965 - MER34 LTR ERV1 -428 114 1 2127 86 0 38 chr5 159599600 159599913 -43485619 + AluSq SINE Alu 1 301 -12 1876 131 3 34 chr5 159599941 159600261 -43485271 + AluSg SINE Alu 1 310 0 826 215 0 0 chr5 159600617 159600780 -43484752 + FAM SINE Alu 10 172 -13 410 224 200 12 chr5 159600784 159600949 -43484583 + MER117 DNA MER1_type 2 197 0 487 221 0 26 chr5 159601283 159601396 -43484136 - MIR SINE MIR -65 143 34 510 323 10 35 chr5 159601868 159602066 -43483466 + L2 LINE L2 2575 2767 -547 203 152 0 0 chr5 159602102 159602135 -43483397 + (TG)n Simple_repeat Simple_repeat 2 34 0 863 146 0 0 chr5 159602301 159602431 -43483101 + AluJ SINE Alu 3 132 -170 493 156 0 73 chr5 159602441 159602537 -43482995 + AluJ SINE Alu 198 286 -26 23 0 0 0 chr5 159602654 159602677 -43482855 + AT_rich Low_complexity Low_complexity 1 23 0 2128 99 0 3 chr5 159602828 159603146 -43482386 - AluSx SINE Alu 0 312 3 1977 105 49 0 chr5 159603912 159604197 -43481335 + AluSx SINE Alu 1 299 -13 1292 147 38 121 chr5 159604245 159604585 -43480947 - AluSx SINE Alu 0 312 1 315 333 43 5 chr5 159604611 159604797 -43480735 - L1MC4a LINE L1 -1865 5943 5751 213 152 0 22 chr5 159604821 159604867 -43480665 + (TAA)n Simple_repeat Simple_repeat 1 45 0 706 253 176 55 chr5 159605248 159605989 -43479543 + L2 LINE L2 2379 3265 -48 240 86 0 0 chr5 159605999 159606034 -43479498 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 1008 79 13 7 chr5 159606548 159606700 -43478832 + L1PA13 LINE L1 6011 6163 0 2275 95 0 9 chr5 159606700 159607015 -43478517 + AluSx SINE Alu 1 312 0 329 291 156 21 chr5 159607361 159607502 -43478030 - MIR SINE MIR 0 262 103 320 225 155 80 chr5 159608260 159608447 -43477085 - L2 LINE L2 0 3313 3113 24 32 0 0 chr5 159608747 159608778 -43476754 + AT_rich Low_complexity Low_complexity 1 31 0 2043 115 0 3 chr5 159608781 159609069 -43476463 - AluSx SINE Alu -25 287 1 201 39 0 0 chr5 159609499 159609525 -43476007 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 814 74 318 6 chr5 159609525 159609701 -43475831 - L1MA2 LINE L1 -167 6137 5907 23 0 0 0 chr5 159609701 159609724 -43475808 + AT_rich Low_complexity Low_complexity 1 23 0 1653 163 0 33 chr5 159609729 159610029 -43475503 - AluJo SINE Alu -22 290 1 1397 191 138 25 chr5 159610673 159611029 -43474503 - MSTD LTR MaLR 0 396 1 729 169 8 8 chr5 159611538 159611662 -43473870 + FLAM_C SINE Alu 1 124 -9 304 298 76 15 chr5 159612114 159612245 -43473287 + MIR3 SINE MIR 20 158 -50 341 221 19 29 chr5 159612262 159612366 -43473166 + MER113 DNA MER1_type? 17 119 -402 2068 121 0 7 chr5 159612446 159612743 -43472789 - AluSx SINE Alu -17 295 1 258 192 0 0 chr5 159612919 159612971 -43472561 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 1430 102 0 0 chr5 159613144 159613331 -43472201 - AluSq SINE Alu -126 187 1 1465 199 84 115 chr5 159613331 159613878 -43471654 + L1ME2 LINE L1 5634 6163 -1 408 264 8 47 chr5 159613884 159614013 -43471519 + MER5A DNA MER1_type 60 183 -6 263 300 144 0 chr5 159614125 159614257 -43471275 - MIR SINE MIR -66 196 43 252 77 0 0 chr5 159614272 159614311 -43471221 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 205 250 0 0 chr5 159614320 159614368 -43471164 - L2 LINE L2 -12 3301 3254 2065 133 3 0 chr5 159615124 159615432 -43470100 + AluJb SINE Alu 1 309 -3 2795 178 8 2 chr5 159615442 159615941 -43469591 - L1MB7 LINE L1 -23 6161 5660 820 139 0 22 chr5 159615949 159616086 -43469446 + FLAM_C SINE Alu 9 142 -1 864 181 12 6 chr5 159616086 159616246 -43469286 - L1MB7 LINE L1 -515 5669 5509 235 244 89 67 chr5 159616429 159616564 -43468968 - MLT1K LTR MaLR -39 549 412 210 280 0 0 chr5 159616564 159616614 -43468918 + C-rich Low_complexity Low_complexity 1 50 0 1704 188 3 0 chr5 159616647 159616956 -43468576 - AluJb SINE Alu -2 310 1 407 289 27 17 chr5 159616976 159617217 -43468315 - MLT1K LTR MaLR -162 426 141 402 314 64 12 chr5 159617795 159617967 -43467565 - MIR3 SINE MIR -8 200 20 704 297 93 35 chr5 159618460 159618679 -43466853 - L1MB7 LINE L1 -841 5305 5055 1395 182 0 83 chr5 159618679 159619003 -43466529 - AluJo SINE Alu -13 299 3 704 297 93 35 chr5 159619003 159619150 -43466382 - L1MB7 LINE L1 -1091 5055 4918 2309 90 0 0 chr5 159619244 159619543 -43465989 - AluSq SINE Alu -12 301 3 1726 205 120 92 chr5 159619558 159619666 -43465866 + MLT1F1 LTR MaLR 9 112 -455 1709 162 3 29 chr5 159619666 159619974 -43465558 - AluJo SINE Alu -12 300 1 1726 205 120 92 chr5 159619974 159620271 -43465261 + MLT1F1 LTR MaLR 112 436 -131 1528 127 26 101 chr5 159620271 159620407 -43465125 + AluJb SINE Alu 1 146 -191 2723 13 0 0 chr5 159620407 159620716 -43464816 + AluY SINE Alu 1 309 -2 1528 127 26 101 chr5 159620716 159620939 -43464593 + AluJb SINE Alu 146 337 0 1726 205 120 92 chr5 159620939 159621063 -43464469 + MLT1F1 LTR MaLR 436 555 -12 2022 88 53 0 chr5 159621309 159621592 -43463940 + AluSx SINE Alu 1 298 -14 373 254 31 46 chr5 159621616 159621746 -43463786 - MLT1J LTR MaLR -60 451 324 800 185 38 49 chr5 159621753 159621937 -43463595 - MER3 DNA MER1_type -3 206 25 583 293 68 41 chr5 159621983 159622036 -43463496 - MLT1J LTR MaLR -235 276 226 2231 91 3 0 chr5 159622036 159622333 -43463199 - AluSc SINE Alu -11 298 1 583 293 68 41 chr5 159622333 159622545 -43462987 - MLT1J LTR MaLR -285 226 4 672 253 197 24 chr5 159623522 159623948 -43461584 + L1ME4a LINE L1 5557 6065 -56 668 185 26 13 chr5 159623997 159624019 -43461513 + L1ME LINE L1 5420 5440 -724 1694 141 33 13 chr5 159624019 159624347 -43461185 + AluSx SINE Alu 1 312 0 668 185 26 13 chr5 159624347 159624475 -43461057 + L1ME LINE L1 5440 5572 -592 978 114 256 0 chr5 159624475 159624651 -43460881 - AluSx SINE Alu -91 221 1 320 149 75 30 chr5 159624679 159624746 -43460786 + L1ME3 LINE L1 6047 6116 -46 28 0 0 0 chr5 159624761 159624789 -43460743 + AT_rich Low_complexity Low_complexity 1 28 0 2180 89 7 0 chr5 159624792 159625085 -43460447 - AluSp SINE Alu -18 295 1 1499 118 57 0 chr5 159625108 159625337 -43460195 + AluSx SINE Alu 38 279 -33 2035 115 28 0 chr5 159625831 159626117 -43459415 + AluSx SINE Alu 1 294 -18 1504 199 3 19 chr5 159626222 159626538 -43458994 + AluJo SINE Alu 1 311 -1 253 218 81 11 chr5 159626556 159626643 -43458889 - MER113 DNA MER1_type? -423 98 6 1414 101 48 0 chr5 159626854 159627063 -43458469 - MER39B LTR ERV1 0 653 435 18522 22 0 0 chr5 159627063 159629211 -43456321 - L1PA3 LINE L1 -1218 4928 2781 7993 16 0 0 chr5 159629211 159630431 -43455101 + L1PA3 LINE L1 4933 6152 -3 21 0 0 0 chr5 159630431 159630452 -43455080 + AT_rich Low_complexity Low_complexity 1 21 0 2856 121 36 9 chr5 159630452 159630484 -43455048 - MER39B LTR ERV1 -203 450 420 1855 138 3 0 chr5 159630484 159630789 -43454743 + AluSx SINE Alu 1 306 0 2856 121 36 9 chr5 159630789 159631193 -43454339 - MER39B LTR ERV1 -233 420 1 2157 115 0 3 chr5 159631542 159631854 -43453678 + AluSq SINE Alu 1 311 -2 185 132 26 0 chr5 159631881 159631919 -43453613 + T-rich Low_complexity Low_complexity 4 42 0 243 292 0 0 chr5 159632365 159632430 -43453102 - MIR SINE MIR -12 250 186 422 204 65 0 chr5 159632465 159632558 -43452974 - L2 LINE L2 -5 3308 3210 1451 142 5 0 chr5 159632565 159632783 -43452749 + AluSx SINE Alu 1 219 -93 227 133 22 0 chr5 159632787 159632832 -43452700 + G-rich Low_complexity Low_complexity 2 47 0 * 728 171 18 12 chr5 159632828 159632998 -43452534 + GA-rich Low_complexity Low_complexity 2 172 0 193 300 160 20 chr5 159633060 159633160 -43452372 + MIR SINE MIR 30 143 -119 383 221 19 39 chr5 159633247 159633351 -43452181 + MIR SINE MIR 161 262 0 204 188 31 109 chr5 159633352 159633394 -43452138 - MIR SINE MIR -87 175 131 3154 110 20 67 chr5 159633394 159633439 -43452093 - L1MB3 LINE L1 -7 6176 6130 2257 81 0 3 chr5 159633439 159633736 -43451796 - AluSc SINE Alu -13 296 1 3154 110 20 67 chr5 159633736 159634200 -43451332 - L1MB3 LINE L1 -53 6130 5695 3137 91 16 0 chr5 159634200 159634627 -43450905 + MER57B LTR ERV1 1 434 0 3154 110 20 67 chr5 159634627 159634700 -43450832 - L1MB3 LINE L1 -488 5695 5620 204 188 31 109 chr5 159634700 159634721 -43450811 - MIR SINE MIR -131 131 117 24 32 0 0 chr5 159635396 159635427 -43450105 + AT_rich Low_complexity Low_complexity 1 31 0 2132 103 20 0 chr5 159635429 159635729 -43449803 + AluSq SINE Alu 1 306 -7 712 165 0 0 chr5 159635729 159635844 -43449688 - AluJo/FLAM SINE Alu -186 116 2 1265 147 16 54 chr5 159635855 159636051 -43449481 - L1MB3 LINE L1 -586 5597 5438 2286 79 3 0 chr5 159636051 159636343 -43449189 + AluSp SINE Alu 1 293 -20 1265 147 16 54 chr5 159636343 159636508 -43449024 - L1MB3 LINE L1 -745 5438 5268 1465 130 0 13 chr5 159637193 159637424 -43448108 + AluJb SINE Alu 85 312 0 3269 75 23 0 chr5 159637443 159637885 -43447647 - L1PA10 LINE L1 0 6168 5717 1279 248 80 22 chr5 159637925 159638340 -43447192 + LTR38 LTR ERV1 87 525 -31 180 0 0 0 chr5 159638343 159638363 -43447169 + (CAGAG)n Simple_repeat Simple_repeat 5 24 0 217 310 39 23 chr5 159638505 159638634 -43446898 - MER5A DNA MER1_type -50 139 9 1640 155 3 35 chr5 159639077 159639367 -43446165 + AluJo SINE Alu 6 286 -26 465 224 307 34 chr5 159639529 159639734 -43445798 + MIR SINE MIR 2 262 0 322 273 128 27 chr5 159640348 159640535 -43444997 - MER90 LTR ERV1 -13 601 396 404 276 63 0 chr5 159640674 159640801 -43444731 - LTR65 LTR ERV1 -506 163 29 584 243 68 7 chr5 159640871 159641019 -43444513 - MER91B DNA MER1_type -33 157 1 229 241 66 66 chr5 159641168 159641305 -43444227 + LTR67 LTR ERVL 413 549 -8 190 152 0 0 chr5 159641525 159641558 -43443974 + MIR SINE MIR 217 249 -13 180 77 0 0 chr5 159641562 159641588 -43443944 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 235 311 11 22 chr5 159641593 159641683 -43443849 - MIR SINE MIR -108 154 66 2140 95 3 7 chr5 159641684 159642005 -43443527 + AluSp SINE Alu 1 313 0 417 83 14 14 chr5 159642006 159642078 -43443454 + L1MB3 LINE L1 6102 6173 -10 849 267 85 13 chr5 159642237 159642473 -43443059 + MIR SINE MIR 2 254 -8 2319 76 0 3 chr5 159642735 159643036 -43442496 - AluSc SINE Alu -9 300 1 501 229 136 21 chr5 159643411 159643551 -43441981 + MLT1F1 LTR MaLR 193 348 -219 1035 197 89 5 chr5 159643552 159643765 -43441767 - LTR47B LTR ERVL 0 443 213 1370 79 0 0 chr5 159643892 159644070 -43441462 + AluSq SINE Alu 130 307 -6 564 154 40 148 chr5 159644082 159644231 -43441301 + FLAM_C SINE Alu 1 133 0 568 223 48 1 chr5 159644247 159644374 -43441158 + MLT1F1 LTR MaLR 421 567 0 714 226 88 143 chr5 159644377 159644510 -43441022 + MLT2D LTR ERVL 3 142 -272 1967 147 0 3 chr5 159644510 159644823 -43440709 + AluJb SINE Alu 1 312 0 714 226 88 143 chr5 159644823 159645074 -43440458 + MLT2D LTR ERVL 142 366 -48 35 24 0 0 chr5 159645085 159645127 -43440405 + AT_rich Low_complexity Low_complexity 1 42 0 2245 43 0 11 chr5 159645135 159645414 -43440118 + AluY SINE Alu 2 277 -34 1053 113 22 22 chr5 159645414 159645732 -43439800 + (TA)n Simple_repeat Simple_repeat 1 318 0 497 279 86 31 chr5 159645865 159646155 -43439377 - L1MC4a LINE L1 -1814 5994 5689 359 188 0 0 chr5 159649687 159649756 -43435776 - MIR SINE MIR -15 247 179 2221 73 11 0 chr5 159649769 159650056 -43435476 - AluY SINE Alu -1 310 21 558 279 25 97 chr5 159650086 159650323 -43435209 - MIR SINE MIR -27 235 16 407 141 0 0 chr5 159650478 159650551 -43434981 + L1M4 LINE L1 5711 5783 -368 854 159 0 0 chr5 159650591 159650729 -43434803 + FLAM_C SINE Alu 1 138 -5 1564 196 0 3 chr5 159650729 159651037 -43434495 + AluJb SINE Alu 1 307 0 309 151 0 19 chr5 159651083 159651136 -43434396 - L1MC3 LINE L1 -1717 6068 6017 2008 142 65 3 chr5 159651147 159651500 -43434032 + L1MC3 LINE L1 6079 6453 -1332 839 111 38 0 chr5 159651500 159651742 -43433790 + L1MB2 LINE L1 5773 6155 -16 342 0 0 0 chr5 159651742 159651780 -43433752 + (TG)n Simple_repeat Simple_repeat 2 39 0 839 111 38 0 chr5 159651780 159651798 -43433734 + L1MB2 LINE L1 6155 6171 0 2344 91 0 0 chr5 159651806 159652114 -43433418 + AluSc SINE Alu 1 308 -1 2294 34 0 0 chr5 159652397 159652664 -43432868 + AluY SINE Alu 28 294 -17 2057 94 0 0 chr5 159652673 159652940 -43432592 + AluSx SINE Alu 1 267 -45 814 264 85 0 chr5 159652941 159653142 -43432390 - MIR SINE MIR -32 230 13 2047 198 116 36 chr5 159653477 159653978 -43431554 - MLT1F LTR MaLR -1 541 1 569 213 37 0 chr5 159654021 159654129 -43431403 + L2 LINE L2 3201 3312 -1 211 333 12 0 chr5 159654294 159654375 -43431157 + MIR SINE MIR 176 257 -5 2050 112 0 55 chr5 159654394 159654724 -43430808 - AluSx SINE Alu 0 312 1 1444 223 205 26 chr5 159654757 159655288 -43430244 + MLT1G LTR MaLR 1 584 -6 346 171 46 160 chr5 159655374 159655549 -43429983 - MLT1K LTR MaLR -82 506 352 384 267 196 53 chr5 159655593 159655976 -43429556 - MLT1L LTR MaLR -13 602 110 277 272 223 10 chr5 159656061 159656164 -43429368 - MLT1K LTR MaLR -367 221 97 375 307 2 92 chr5 159656500 159656684 -43428848 - MIR SINE MIR -63 145 30 2265 94 0 0 chr5 159656914 159657213 -43428319 + AluSx SINE Alu 1 299 -13 222 37 0 0 chr5 159657286 159657313 -43428219 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 226 305 105 0 chr5 159657659 159657764 -43427768 + MIR SINE MIR 96 211 -51 401 312 96 32 chr5 159657961 159658179 -43427353 + MIR SINE MIR 12 243 -19 22 35 0 0 chr5 159658763 159658792 -43426740 + GC_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 159658810 159658836 -43426696 + GC_rich Low_complexity Low_complexity 1 26 0 588 228 56 44 chr5 159659436 159659616 -43425916 - MIR SINE MIR -48 214 33 977 168 6 0 chr5 159660215 159660376 -43425156 + MER105 DNA DNA 1 162 -42 180 111 0 0 chr5 159660600 159660627 -43424905 + (T)n Simple_repeat Simple_repeat 1 27 0 549 184 39 0 chr5 159660643 159660746 -43424786 - MER58B DNA MER1_type -10 331 225 1011 138 19 0 chr5 159660746 159660906 -43424626 + AluJb SINE Alu 132 294 -18 950 186 26 61 chr5 159660906 159661048 -43424484 - MER58B DNA MER1_type -2197 223 78 1775 165 13 22 chr5 159661048 159661363 -43424169 + AluJb SINE Alu 1 312 0 950 186 26 61 chr5 159661363 159661403 -43424129 - MER58B DNA MER1_type -2342 78 48 2044 128 10 0 chr5 159661403 159661700 -43423832 + AluSq SINE Alu 1 300 -13 950 186 26 61 chr5 159661700 159661747 -43423785 - MER58B DNA MER1_type -2372 48 1 256 288 85 8 chr5 159661863 159661981 -43423551 + L2 LINE L2 2707 2833 -481 503 211 9 9 chr5 159662052 159662161 -43423371 - LTR67 LTR ERVL -7 550 442 841 260 57 29 chr5 159662264 159662625 -43422907 - L2 LINE L2 -3 3310 2717 898 211 112 86 chr5 159662656 159663121 -43422411 - L1MC4 LINE L1 0 8042 7566 2095 122 0 0 chr5 159663121 159663417 -43422115 - AluSx SINE Alu -16 296 1 188 333 74 9 chr5 159663554 159663662 -43421870 + L2 LINE L2 3157 3271 -1 475 189 9 38 chr5 159663705 159663811 -43421721 - L2 LINE L2 -47 3266 3164 346 248 68 45 chr5 159664195 159664328 -43421204 + MIR SINE MIR 119 254 -8 2090 126 11 25 chr5 159664613 159664977 -43420555 - L1MB2 LINE L1 -7 6164 5806 285 288 131 33 chr5 159665834 159665987 -43419545 + MIR3 SINE MIR 37 204 -4 206 307 29 51 chr5 159666060 159666197 -43419335 - MIR SINE MIR -70 138 5 338 193 96 0 chr5 159668371 159668454 -43417078 + MIR SINE MIR 86 176 -86 2193 136 0 3 chr5 159669081 159669391 -43416141 - AluSx SINE Alu -3 309 1 1810 190 0 3 chr5 159671629 159671919 -43413613 + AluJo SINE Alu 1 289 -23 1113 218 136 9 chr5 159671936 159671987 -43413545 - L1MB8 LINE L1 -63 6115 6072 2247 113 0 10 chr5 159671987 159672289 -43413243 - AluSx SINE Alu -12 300 2 1113 218 136 9 chr5 159672289 159672553 -43412979 - L1MB8 LINE L1 -106 6072 5760 2267 99 0 3 chr5 159672892 159673185 -43412347 + AluSx SINE Alu 1 292 -20 336 264 248 8 chr5 159673567 159673817 -43411715 + L2 LINE L2 2995 3304 -9 1003 237 205 16 chr5 159674073 159674566 -43410966 + L2 LINE L2 1232 1817 -1497 3453 191 68 160 chr5 159674570 159674598 -43410934 - L1MCb LINE L1 -4851 1194 1165 1579 133 157 10 chr5 159674598 159674892 -43410640 - MER44D DNA MER2_type -2 607 1 3453 191 68 160 chr5 159674892 159674922 -43410610 - L1MCb LINE L1 -4880 1165 1134 1702 150 16 65 chr5 159674922 159675228 -43410304 - AluJb SINE Alu -21 291 1 3453 191 68 160 chr5 159675228 159675427 -43410105 - L1MCb LINE L1 -4911 1134 918 2461 80 3 0 chr5 159675427 159675727 -43409805 - AluSp SINE Alu -12 301 1 3453 191 68 160 chr5 159675727 159676807 -43408725 - L1MCb LINE L1 -5127 918 38 2748 257 133 12 chr5 159676810 159677956 -43407576 + L2 LINE L2 1822 3154 -159 1783 165 0 43 chr5 159677956 159678278 -43407254 - AluJb SINE Alu -4 308 1 2748 257 133 12 chr5 159678278 159678461 -43407071 + L2 LINE L2 3154 3313 0 2316 82 0 51 chr5 159679553 159679869 -43405663 + AluSx SINE Alu 1 300 -12 1582 129 71 14 chr5 159680331 159680625 -43404907 + L1MC3 LINE L1 7475 7785 0 35 0 0 0 chr5 159680650 159680685 -43404847 + AT_rich Low_complexity Low_complexity 1 35 0 2124 122 3 7 chr5 159680803 159681099 -43404433 + AluSg SINE Alu 1 295 -15 1758 150 24 20 chr5 159681204 159681497 -43404035 + AluJo SINE Alu 1 294 -18 2600 53 0 0 chr5 159682149 159682449 -43403083 - AluY SINE Alu -10 301 2 25 0 0 0 chr5 159682688 159682713 -43402819 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 159683450 159683480 -43402052 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 159683776 159683798 -43401734 + AT_rich Low_complexity Low_complexity 1 22 0 1172 175 38 5 chr5 159684324 159684535 -43400997 + LOR1-int LTR ERV1 6880 7097 -1023 4266 136 25 12 chr5 159684540 159685225 -43400307 + MER72 LTR ERV1 1 694 -28 818 239 120 103 chr5 159685621 159686010 -43399522 + L1MC4 LINE L1 7205 7586 -456 2437 48 10 3 chr5 159686010 159686301 -43399231 + AluY SINE Alu 2 294 -17 818 239 120 103 chr5 159686301 159686735 -43398797 + L1MC4 LINE L1 7586 8042 0 2237 108 17 0 chr5 159687464 159687760 -43397772 + AluSq SINE Alu 1 301 -12 262 310 16 54 chr5 159688515 159688644 -43396888 + L1ME LINE L1 5574 5697 -424 26 50 0 0 chr5 159689626 159689666 -43395866 + AT_rich Low_complexity Low_complexity 1 40 0 1797 161 44 3 chr5 159689982 159690280 -43395252 - AluJb SINE Alu -2 310 1 319 226 95 0 chr5 159690307 159690391 -43395141 - MER5C DNA MER1_type 0 324 233 611 212 35 9 chr5 159690410 159690523 -43395009 - FLAM_A SINE Alu -19 123 8 205 145 428 15 chr5 159690530 159690661 -43394871 - MER5C DNA MER1_type -92 232 48 472 302 73 0 chr5 159690855 159691034 -43394498 + MER117 DNA MER1_type 3 194 -3 853 265 70 39 chr5 159691074 159691432 -43394100 + L2 LINE L2 2944 3312 -1 242 248 0 107 chr5 159691876 159691942 -43393590 + L1ME2 LINE L1 6048 6097 -67 1613 195 27 0 chr5 159691942 159692240 -43393292 - AluJo SINE Alu 0 312 7 242 248 0 107 chr5 159692240 159692294 -43393238 + L1ME2 LINE L1 6097 6155 -9 2136 98 3 11 chr5 159692310 159692628 -43392904 + AluSx SINE Alu 1 316 0 2302 108 0 6 chr5 159694771 159695085 -43390447 + AluSx SINE Alu 1 312 0 1471 150 0 0 chr5 159695908 159696134 -43389398 - AluJb SINE Alu -1 311 86 2514 78 3 0 chr5 159698324 159698630 -43386902 + AluSq SINE Alu 1 307 -6 2313 102 0 0 chr5 159698972 159699267 -43386265 + AluSx SINE Alu 2 296 -16 657 205 30 60 chr5 159699300 159699466 -43386066 - MER20 DNA MER1_type 0 219 59 1130 145 0 0 chr5 159699466 159699625 -43385907 + AluJb SINE Alu 135 293 -19 21 36 0 0 chr5 159699759 159699787 -43385745 + AT_rich Low_complexity Low_complexity 1 28 0 1843 147 3 25 chr5 159699916 159700298 -43385234 + AluSx SINE Alu 3 378 0 1937 144 28 0 chr5 159700328 159700612 -43384920 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr5 159700788 159700809 -43384723 + AT_rich Low_complexity Low_complexity 1 21 0 666 169 155 20 chr5 159702012 159702160 -43383372 + MER5B DNA MER1_type 6 173 -5 217 222 42 14 chr5 159702938 159703010 -43382522 - MER5A DNA MER1_type -89 100 27 437 312 63 16 chr5 159703175 159703364 -43382168 - MIR SINE MIR -12 250 53 461 114 0 0 chr5 159703374 159703453 -43382079 + L1MB7 LINE L1 4961 5039 -1107 2194 77 45 3 chr5 159703457 159703743 -43381789 + AluSg SINE Alu 1 298 -12 1463 157 26 46 chr5 159703743 159704044 -43381488 + L1MB7 LINE L1 5886 6180 -4 655 158 5 186 chr5 159704256 159704343 -43381189 + MER45A DNA AcHobo 1 29 -1552 1276 124 0 16 chr5 159704343 159704537 -43380995 + L1PB1 LINE L1 5958 6148 -3 655 158 5 186 chr5 159704537 159704664 -43380868 + MER45A DNA AcHobo 29 177 -1 349 248 37 9 chr5 159705317 159705426 -43380106 - MIR SINE MIR -41 221 110 26 0 0 0 chr5 159705476 159705502 -43380030 + AT_rich Low_complexity Low_complexity 1 26 0 2063 126 0 20 chr5 159705560 159705861 -43379671 - AluSx SINE Alu -15 297 3 1874 84 29 61 chr5 159705872 159706182 -43379350 - L1PA13 LINE L1 0 6163 5864 2167 106 0 50 chr5 159706935 159707256 -43378276 + AluSx SINE Alu 1 305 -7 496 259 67 47 chr5 159707302 159707557 -43377975 - MIR SINE MIR 0 262 3 220 204 0 0 chr5 159708218 159708262 -43377270 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 602 89 22 0 chr5 159708531 159708621 -43376911 - MER53 DNA DNA -97 92 1 183 42 0 0 chr5 159710632 159710656 -43374876 + (CA)n Simple_repeat Simple_repeat 2 25 0 239 244 252 0 chr5 159711091 159711214 -43374318 + MIR SINE MIR 81 234 -28 233 239 0 0 chr5 159711981 159712048 -43373484 - MIR SINE MIR -127 135 69 695 284 9 28 chr5 159713002 159713220 -43372312 - MIR SINE MIR -35 227 14 602 231 26 42 chr5 159717028 159717240 -43368292 + MIR SINE MIR 52 260 -2 599 295 108 21 chr5 159717221 159717462 -43368070 + MIR SINE MIR 1 262 0 * 491 268 49 78 chr5 159717641 159717846 -43367686 + MIR SINE MIR 28 226 -36 235 195 0 0 chr5 159718116 159718157 -43367375 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 206 246 82 123 chr5 159718135 159718257 -43367275 - L2 LINE L2 -1 3271 3155 * 357 256 235 0 chr5 159718336 159718475 -43367057 + MIR SINE MIR 37 200 -62 437 228 20 114 chr5 159718503 159718721 -43366811 - MIR SINE MIR -61 201 5 334 304 31 62 chr5 159719068 159719256 -43366276 - MIR SINE MIR -54 154 20 240 217 17 33 chr5 159719445 159719505 -43366027 + L2 LINE L2 3214 3272 0 201 240 190 30 chr5 159719692 159719792 -43365740 + L2 LINE L2 3156 3271 -1 292 247 52 13 chr5 159720784 159720861 -43364671 - MIR3 SINE MIR -17 191 112 * 452 288 41 17 chr5 159720844 159721048 -43364484 + MIR SINE MIR 44 252 -10 380 261 0 23 chr5 159721062 159721150 -43364382 - MIR SINE MIR -100 108 23 548 335 39 16 chr5 159721195 159721449 -43364083 + MIR SINE MIR 3 262 0 274 333 0 11 chr5 159721768 159721855 -43363677 - L2 LINE L2 -19 3294 3209 193 283 22 0 chr5 159721895 159721941 -43363591 - L2 LINE L2 -20 3252 3206 591 206 8 16 chr5 159721987 159722113 -43363419 - MIR SINE MIR -19 243 119 1845 108 3 72 chr5 159722614 159722920 -43362612 - AluJb SINE Alu -17 295 11 634 272 52 24 chr5 159722992 159723205 -43362327 - MIR SINE MIR -31 231 13 608 254 164 15 chr5 159723537 159723738 -43361794 - MIR SINE MIR 0 262 32 739 205 20 0 chr5 159723746 159723897 -43361635 - MER3 DNA MER1_type 0 209 56 565 237 53 30 chr5 159724176 159724345 -43361187 - MIR SINE MIR -62 200 28 270 240 192 10 chr5 159724582 159724686 -43360846 - L2 LINE L2 0 3272 3150 300 235 87 35 chr5 159724765 159724880 -43360652 - L1ME4a LINE L1 -40 6081 5961 27 0 0 0 chr5 159724942 159724969 -43360563 + AT_rich Low_complexity Low_complexity 1 27 0 468 298 120 21 chr5 159725397 159725588 -43359944 + MIR SINE MIR 25 234 -28 180 77 0 0 chr5 159726445 159726471 -43359061 + (CAG)n Simple_repeat Simple_repeat 2 27 0 784 249 67 9 chr5 159727128 159727353 -43358179 - MIR SINE MIR -9 253 16 234 103 103 0 chr5 159727966 159728005 -43357527 - MIR SINE MIR -103 159 117 221 290 14 29 chr5 159728165 159728234 -43357298 + L2 LINE L2 3205 3272 0 297 324 66 5 chr5 159728725 159728855 -43356677 - MIR3 SINE MIR -46 162 22 228 67 0 0 chr5 159729875 159729905 -43355627 + (TG)n Simple_repeat Simple_repeat 2 31 0 229 203 62 62 chr5 159729957 159730021 -43355511 - L2 LINE L2 -2 3311 3248 194 333 86 0 chr5 159730046 159730127 -43355405 - L2 LINE L2 0 3272 3185 566 186 25 8 chr5 159730861 159730979 -43354553 + MER103 DNA DNA 45 164 -2 217 300 89 0 chr5 159731057 159731147 -43354385 - L2 LINE L2 -31 3282 3185 204 305 53 21 chr5 159731893 159731988 -43353544 + MIR SINE MIR 23 120 -88 225 299 65 13 chr5 159732065 159732160 -43353372 - MIR SINE MIR -61 147 43 240 238 56 63 chr5 159732447 159732590 -43352942 + MER113 DNA MER1_type? 1 142 -379 30 59 0 0 chr5 159732622 159732673 -43352859 + AT_rich Low_complexity Low_complexity 1 51 0 562 246 131 13 chr5 159733547 159733736 -43351796 - MIR SINE MIR -6 256 45 2396 89 0 3 chr5 159733736 159734038 -43351494 + AluSq SINE Alu 1 301 -12 2437 66 7 10 chr5 159734068 159734369 -43351163 - AluY SINE Alu -7 304 5 2032 102 11 14 chr5 159735128 159735436 -43350096 + AluSg SINE Alu 1 307 0 850 225 23 0 chr5 159735546 159735719 -43349813 + MIR SINE MIR 37 213 -49 271 252 117 19 chr5 159735744 159735847 -43349685 + L2 LINE L2 1686 1798 -1516 305 236 213 8 chr5 159736452 159736579 -43348953 - MER103 DNA DNA -7 159 7 299 165 25 184 chr5 159736759 159736917 -43348615 - MIR SINE MIR -7 255 123 729 164 25 0 chr5 159736944 159737066 -43348466 + MER63 DNA MER1_type 1 751 -85 224 192 39 19 chr5 159737112 159737164 -43348368 - MIR SINE MIR -110 98 46 31 44 0 0 chr5 159737685 159737730 -43347802 + AT_rich Low_complexity Low_complexity 1 45 0 309 332 161 16 chr5 159737974 159738167 -43347365 - L1MC4a LINE L1 -1906 5902 5682 269 316 26 0 chr5 159738219 159738295 -43347237 - L2 LINE L2 -44 3228 3151 222 37 0 0 chr5 159738723 159738750 -43346782 + (TA)n Simple_repeat Simple_repeat 1 27 0 2323 114 0 0 chr5 159738750 159739049 -43346483 - AluSx SINE Alu -13 299 1 384 187 0 13 chr5 159739398 159739473 -43346059 + LTR67 LTR ERVL 484 557 0 184 194 28 0 chr5 159739815 159739851 -43345681 + L2 LINE L2 3180 3216 -97 1185 289 89 21 chr5 159740217 159740953 -43344579 + L2 LINE L2 2532 3313 0 550 248 214 10 chr5 159741163 159741504 -43344028 + MLT1J LTR MaLR 1 459 -52 2326 98 0 3 chr5 159742312 159742609 -43342923 + AluSx SINE Alu 1 296 -16 183 225 25 0 chr5 159742813 159742853 -43342679 - L3 LINE CR1 -111 1466 1426 * 243 333 16 0 chr5 159742821 159742884 -43342648 + L2 LINE L2 3158 3221 -51 1139 249 32 8 chr5 159742945 159743194 -43342338 - MIR SINE MIR -6 256 2 231 130 0 65 chr5 159743205 159743251 -43342281 + L2 LINE L2 3269 3311 -2 495 312 7 43 chr5 159743907 159744048 -43341484 + L2 LINE L2 3134 3269 -3 1721 124 32 0 chr5 159744369 159744618 -43340914 + AluSx SINE Alu 1 257 -55 578 338 80 16 chr5 159744655 159744969 -43340563 - L2 LINE L2 -50 3263 2930 309 292 11 0 chr5 159745193 159745282 -43340250 - MIR SINE MIR -119 143 54 262 250 28 14 chr5 159745425 159745497 -43340035 - L2 LINE L2 -9 3304 3232 * 544 306 129 0 chr5 159745491 159745661 -43339871 + MIR SINE MIR 21 212 -50 2376 96 0 10 chr5 159745684 159745996 -43339536 + AluSg SINE Alu 1 309 -1 455 259 9 17 chr5 159746034 159746150 -43339382 + L2 LINE L2 3197 3311 -2 2405 96 0 10 chr5 159746501 159746634 -43338898 + AluSg1 SINE Alu 1 134 -175 2347 92 3 10 chr5 159746634 159746940 -43338592 + AluSg SINE Alu 1 304 -6 2405 96 0 10 chr5 159746940 159747118 -43338414 + AluSg1 SINE Alu 134 309 0 332 340 105 6 chr5 159747347 159747509 -43338023 + MER5B DNA MER1_type 1 178 0 2247 64 50 4 chr5 159748756 159749037 -43336495 + AluSx SINE Alu 10 303 -9 2316 85 14 3 chr5 159749242 159749536 -43335996 - AluSx SINE Alu -15 297 1 581 272 68 16 chr5 159749628 159749819 -43335713 + MIR SINE MIR 13 213 -49 279 250 69 0 chr5 159749854 159749926 -43335606 + MIR SINE MIR 186 262 0 370 306 33 0 chr5 159750011 159750132 -43335400 - L2 LINE L2 -223 3049 2925 2105 107 14 14 chr5 159751231 159751543 -43333989 + AluSg SINE Alu 1 312 0 183 387 67 0 chr5 159751545 159751620 -43333912 - L2 LINE L2 -87 3185 3106 648 226 262 21 chr5 159751620 159752040 -43333492 - MLT1H1 LTR MaLR 0 555 37 415 295 82 56 chr5 159752088 159752500 -43333032 - L2 LINE L2 -179 3093 2676 1835 135 76 0 chr5 159752638 159752926 -43332606 - AluSx SINE Alu -2 310 1 2330 81 0 0 chr5 159753051 159753364 -43332168 - AluSp SINE Alu 0 313 1 244 204 21 65 chr5 159753494 159753587 -43331945 - HAL1 LINE L1 -35 2472 2384 446 244 32 103 chr5 159753599 159753767 -43331765 + MIR SINE MIR 18 172 -63 317 369 88 23 chr5 159753969 159754403 -43331129 + L2 LINE L2 1533 1994 -1320 553 212 291 35 chr5 159755031 159755234 -43330298 + MIR SINE MIR 8 262 0 558 254 90 30 chr5 159755996 159756197 -43329335 + MIR SINE MIR 2 214 -48 385 361 59 12 chr5 159756252 159756421 -43329111 + L2 LINE L2 3089 3265 -7 587 325 85 27 chr5 159756494 159757017 -43328515 - L2 LINE L2 -6 3307 2755 * 750 269 75 4 chr5 159757010 159757237 -43328295 - MIR SINE MIR -1 261 19 592 252 54 0 chr5 159758365 159758512 -43327020 + MIR SINE MIR 12 166 -96 335 196 175 41 chr5 159758522 159758619 -43326913 - MIR SINE MIR -65 143 34 2178 132 0 7 chr5 159758915 159759218 -43326314 + AluSx SINE Alu 1 301 -11 2151 130 3 0 chr5 159759834 159760142 -43325390 + AluSq SINE Alu 1 309 -4 319 217 33 54 chr5 159760145 159760237 -43325295 + MIR SINE MIR 156 245 -17 829 186 0 35 chr5 159760268 159760440 -43325092 - FRAM SINE Alu 0 166 1 305 268 14 0 chr5 159760546 159760617 -43324915 - L1MCa LINE L1 -4349 2077 2006 306 0 0 0 chr5 159760617 159760651 -43324881 + (CA)n Simple_repeat Simple_repeat 1 34 0 2095 103 14 17 chr5 159760660 159760950 -43324582 - AluSx SINE Alu -23 289 1 2290 93 7 7 chr5 159761776 159762077 -43323455 + AluSx SINE Alu 1 301 -11 1471 149 141 11 chr5 159762123 159762399 -43323133 - AluSx SINE Alu 0 312 1 272 340 43 11 chr5 159762402 159762496 -43323036 - L2 LINE L2 -44 3228 3132 560 275 7 14 chr5 159762580 159762722 -43322810 + MER5A DNA MER1_type 1 141 -48 5081 161 21 22 chr5 159762724 159763575 -43321957 - L1MB5 LINE L1 -6 6168 5317 1886 134 17 14 chr5 159763575 159763865 -43321667 + AluJb SINE Alu 1 291 -21 5081 161 21 22 chr5 159763865 159764092 -43321440 - L1MB5 LINE L1 -857 5317 5090 2221 110 7 3 chr5 159764092 159764400 -43321132 + AluSq SINE Alu 1 309 -4 5081 161 21 22 chr5 159764400 159764513 -43321019 - L1MB5 LINE L1 -1084 5090 4978 424 86 0 0 chr5 159764526 159764584 -43320948 + MLT1E1 LTR MaLR 597 654 0 810 281 19 48 chr5 159764584 159764894 -43320638 + HERVL LTR ERVL 3069 3369 -2285 748 201 50 25 chr5 159764896 159765055 -43320477 - MER21B LTR ERV1 -372 491 329 254 157 0 20 chr5 159765060 159765111 -43320421 - L1MB5 LINE L1 -1154 4992 4943 455 135 10 29 chr5 159765112 159765216 -43320316 + CT-rich Low_complexity Low_complexity 1 102 0 1632 183 0 15 chr5 159765217 159765550 -43319982 - L1MB5 LINE L1 -1199 4947 4620 191 240 0 40 chr5 159765551 159765601 -43319931 + MER5A DNA MER1_type 97 144 -45 3733 151 72 6 chr5 159765608 159766242 -43319290 - L1MB2 LINE L1 -3 6168 5481 2312 102 3 0 chr5 159766242 159766537 -43318995 - AluSx SINE Alu -16 296 1 3733 151 72 6 chr5 159766537 159766605 -43318927 - L1MB2 LINE L1 -690 5481 5419 766 151 7 40 chr5 159766616 159766768 -43318764 - L1MD3 LINE L1 0 7995 7849 1883 159 3 7 chr5 159766825 159767126 -43318406 - AluJb SINE Alu -12 300 1 360 331 108 12 chr5 159767151 159767317 -43318215 - L2 LINE L2 -193 3079 2898 733 242 75 13 chr5 159767340 159767567 -43317965 - MIR SINE MIR -13 249 9 326 292 150 17 chr5 159767791 159767887 -43317645 + L2 LINE L2 3136 3252 -20 2334 103 0 6 chr5 159767887 159768199 -43317333 - AluSx SINE Alu -2 310 1 326 292 150 17 chr5 159768199 159768222 -43317310 + L2 LINE L2 3252 3271 -1 1679 158 7 33 chr5 159768364 159768667 -43316865 + AluJb SINE Alu 2 296 -16 230 281 16 0 chr5 159769385 159769449 -43316083 + (CA)n Simple_repeat Simple_repeat 2 66 0 229 287 0 11 chr5 159769824 159769911 -43315621 + (CA)n Simple_repeat Simple_repeat 1 86 0 456 305 95 43 chr5 159770107 159770432 -43315100 + L2 LINE L2 2952 3293 -20 2325 71 3 0 chr5 159770440 159770734 -43314798 + AluSp SINE Alu 1 295 -18 1982 135 7 0 chr5 159770934 159771230 -43314302 + AluSx SINE Alu 1 298 -14 598 245 141 32 chr5 159771485 159771671 -43313861 - MIR SINE MIR -6 256 51 2189 83 7 0 chr5 159772372 159772662 -43312870 + AluSp SINE Alu 10 301 -12 379 188 0 62 chr5 159773160 159773256 -43312276 + LTR33A LTR ERVL 421 510 -13 1341 190 31 116 chr5 159773323 159773751 -43311781 - MER39 LTR ERV1 0 682 320 2232 87 0 26 chr5 159773751 159774062 -43311470 - AluSx SINE Alu -9 303 1 1341 190 31 116 chr5 159774062 159774120 -43311412 - MER39 LTR ERV1 -362 320 259 284 232 84 42 chr5 159774095 159774190 -43311342 - LTR48B LTR ERV1 -545 99 1 * 1302 183 32 39 chr5 159774246 159774866 -43310666 - LTR48B-int LTR ERV1 -148 6183 4333 2340 61 0 3 chr5 159774867 159775161 -43310371 + AluY SINE Alu 1 293 -18 212 0 0 35 chr5 159776242 159776271 -43309261 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 8275 185 65 103 chr5 159776273 159776618 -43308914 - LTR48B-int LTR ERV1 -603 4333 3976 2100 61 61 0 chr5 159776618 159776896 -43308636 - AluSq SINE Alu -18 295 1 8275 185 65 103 chr5 159776896 159777811 -43307721 - LTR48B-int LTR ERV1 -960 3976 3027 2333 71 0 0 chr5 159777811 159778105 -43307427 - AluY SINE Alu -17 294 1 8275 185 65 103 chr5 159778105 159778332 -43307200 - LTR48B-int LTR ERV1 -1909 3027 2793 2356 60 0 0 chr5 159778332 159778630 -43306902 + AluY SINE Alu 13 310 -1 8275 185 65 103 chr5 159778630 159779096 -43306436 - LTR48B-int LTR ERV1 -2143 2793 2311 2155 110 13 0 chr5 159779096 159779405 -43306127 - AluSp SINE Alu 0 313 1 8275 185 65 103 chr5 159779405 159779597 -43305935 - LTR48B-int LTR ERV1 -2625 2311 2113 2091 111 0 3 chr5 159779597 159779894 -43305638 + AluSg SINE Alu 1 296 -14 8275 185 65 103 chr5 159779894 159780875 -43304657 - LTR48B-int LTR ERV1 -2823 2113 1324 2099 113 13 3 chr5 159780876 159781186 -43304346 + AluSq SINE Alu 1 313 0 518 108 12 0 chr5 159781187 159781270 -43304262 + (GGAA)n Simple_repeat Simple_repeat 2 85 0 1346 192 96 68 chr5 159781270 159781320 -43304212 - LTR48B-int LTR ERV1 -3598 1338 1291 547 181 0 142 chr5 159781320 159781475 -43304057 - FLAM_A SINE Alu 0 133 1 1346 192 96 68 chr5 159781475 159781680 -43303852 - LTR48B-int LTR ERV1 -3645 1291 1093 2419 65 0 0 chr5 159781680 159781974 -43303558 - AluSc SINE Alu -15 294 1 1346 192 96 68 chr5 159781974 159782155 -43303377 - LTR48B-int LTR ERV1 -3843 1093 889 876 208 121 48 chr5 159782336 159782839 -43302693 - LTR48B-int LTR ERV1 -4061 875 292 2012 101 0 14 chr5 159782855 159783173 -43302359 + AluY SINE Alu 1 314 0 2076 129 0 0 chr5 159783193 159783488 -43302044 + AluSx SINE Alu 1 295 -17 198 0 0 0 chr5 159783488 159783510 -43302022 + (TA)n Simple_repeat Simple_repeat 2 23 0 2157 80 0 58 chr5 159783523 159783850 -43301682 - AluY SINE Alu -3 308 1 225 0 0 0 chr5 159783888 159783913 -43301619 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2224 81 0 0 chr5 159783916 159784201 -43301331 - AluY SINE Alu -26 285 1 319 53 0 4 chr5 159784225 159784431 -43301101 + AluY SINE Alu 17 298 -3 22 35 0 0 chr5 159784431 159784460 -43301072 + AT_rich Low_complexity Low_complexity 1 29 0 675 224 13 99 chr5 159784476 159784532 -43301000 - LTR49-int LTR ERV1 -4797 1534 1475 2072 135 0 0 chr5 159784532 159784843 -43300689 - AluSx SINE Alu -1 311 1 675 224 13 99 chr5 159784843 159785154 -43300378 - LTR49-int LTR ERV1 -4856 1475 1139 2166 108 0 22 chr5 159785154 159785470 -43300062 + AluSx SINE Alu 1 309 -3 675 224 13 99 chr5 159785470 159785506 -43300026 - LTR49-int LTR ERV1 -5192 1139 571 2314 84 0 3 chr5 159785515 159785824 -43299708 - AluSg SINE Alu -2 308 1 777 216 42 89 chr5 159785838 159786097 -43299435 - MER39 LTR ERV1 -192 515 269 232 250 48 48 chr5 159786080 159786164 -43299368 - LTR48B LTR ERV1 -555 89 6 * 442 171 0 0 chr5 159786282 159786364 -43299168 + L1MA10 LINE L1 6253 6334 0 216 97 0 0 chr5 159786549 159786580 -43298952 + (CA)n Simple_repeat Simple_repeat 2 32 0 185 288 0 45 chr5 159786878 159786944 -43298588 + L2 LINE L2 3235 3297 -16 862 269 27 27 chr5 159787008 159787264 -43298268 - MIR SINE MIR 0 262 7 2053 113 6 3 chr5 159787275 159787586 -43297946 + AluSx SINE Alu 1 312 0 285 288 131 33 chr5 159790343 159790496 -43295036 + MIR3 SINE MIR 37 204 -4 206 307 29 51 chr5 159790569 159790706 -43294826 - MIR SINE MIR -70 138 5 386 248 159 14 chr5 159792880 159793025 -43292507 + MIR SINE MIR 86 251 -11 2089 132 0 3 chr5 159793590 159793900 -43291632 - AluSx SINE Alu -3 309 1 23 33 0 0 chr5 159796019 159796049 -43289483 + AT_rich Low_complexity Low_complexity 1 30 0 839 189 0 0 chr5 159796131 159796274 -43289258 + AluJo SINE Alu 1 143 -169 1908 103 3 40 chr5 159796276 159796577 -43288955 + AluSc SINE Alu 19 308 -1 21 36 0 0 chr5 159796869 159796897 -43288635 + GC_rich Low_complexity Low_complexity 1 28 0 2634 87 31 91 chr5 159796948 159797595 -43287937 + SVA Other Other 393 868 -597 403 287 106 73 chr5 159797700 159798901 -43286631 - L1M4c LINE L1 -1205 1538 795 6171 45 3 52 chr5 159798980 159799861 -43285671 + SVA Other Other 549 1386 0 2161 96 7 3 chr5 159799886 159800187 -43285345 + AluSp SINE Alu 1 302 -11 974 181 0 6 chr5 159800363 159800534 -43284998 + AluJo SINE Alu 120 289 -23 917 224 185 10 chr5 159800551 159800602 -43284930 - L1MB8 LINE L1 -63 6115 6074 2117 113 0 10 chr5 159800602 159800904 -43284628 - AluSx SINE Alu -12 300 2 917 224 185 10 chr5 159800904 159801155 -43284377 - L1MB8 LINE L1 -104 6074 5760 2124 102 0 3 chr5 159801494 159801787 -43283745 + AluSx SINE Alu 1 292 -20 449 260 248 8 chr5 159802169 159802419 -43283113 + L2 LINE L2 2995 3304 -9 1190 243 202 16 chr5 159802675 159803169 -43282363 + L2 LINE L2 1232 1817 -1497 3315 194 68 163 chr5 159803173 159803201 -43282331 - L1MCb LINE L1 -4851 1194 1165 1584 129 157 10 chr5 159803201 159803495 -43282037 - MER44D DNA MER2_type -2 607 1 3315 194 68 163 chr5 159803495 159803525 -43282007 - L1MCb LINE L1 -4880 1165 1134 1601 148 16 59 chr5 159803525 159803829 -43281703 - AluJb SINE Alu -21 291 1 3315 194 68 163 chr5 159803829 159804028 -43281504 - L1MCb LINE L1 -4911 1134 918 2329 83 3 0 chr5 159804028 159804329 -43281203 - AluSp SINE Alu -11 302 1 3315 194 68 163 chr5 159804329 159805413 -43280119 - L1MCb LINE L1 -5127 918 38 3173 253 134 13 chr5 159805416 159806562 -43278970 + L2 LINE L2 1822 3154 -159 1574 163 0 90 chr5 159806562 159806905 -43278627 - AluJb SINE Alu 0 312 1 3173 253 134 13 chr5 159806905 159807088 -43278444 + L2 LINE L2 3154 3313 0 2127 81 0 52 chr5 159808182 159808490 -43277042 + AluSx SINE Alu 6 297 -15 1548 134 75 10 chr5 159808952 159809244 -43276288 + L1MC3 LINE L1 7475 7785 0 35 0 0 0 chr5 159809269 159809304 -43276228 + AT_rich Low_complexity Low_complexity 1 35 0 2037 115 3 7 chr5 159809422 159809718 -43275814 + AluSg SINE Alu 1 295 -15 1647 151 24 17 chr5 159809823 159810115 -43275417 + AluJo SINE Alu 1 294 -18 2438 54 0 0 chr5 159810767 159811064 -43274468 - AluY SINE Alu -13 298 2 372 91 18 0 chr5 159811577 159811660 -43273872 + AluSp/q SINE Alu 230 313 0 1690 135 76 0 chr5 159811784 159812072 -43273460 + AluSx SINE Alu 1 310 -2 405 295 82 56 chr5 159812210 159812622 -43272910 + L2 LINE L2 2676 3093 -179 769 220 262 21 chr5 159812670 159813090 -43272442 + MLT1H1 LTR MaLR 37 555 0 182 387 67 0 chr5 159813090 159813165 -43272367 + L2 LINE L2 3106 3185 -87 189 0 0 0 chr5 159813167 159813188 -43272344 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1964 107 14 14 chr5 159813190 159813479 -43272053 - AluSg SINE Alu -21 289 1 369 306 33 0 chr5 159814578 159814699 -43270833 + L2 LINE L2 2925 3049 -223 285 250 69 0 chr5 159814784 159814856 -43270676 - MIR SINE MIR 0 262 186 583 272 68 16 chr5 159814891 159815082 -43270450 - MIR SINE MIR -49 213 13 2102 79 28 14 chr5 159815174 159815464 -43270068 + AluSx SINE Alu 1 294 -18 1500 199 3 19 chr5 159815569 159815885 -43269647 + AluJo SINE Alu 1 311 -1 253 218 81 11 chr5 159815903 159815990 -43269542 - MER113 DNA MER1_type? -423 98 6 1414 101 48 0 chr5 159816201 159816410 -43269122 - MER39B LTR ERV1 0 653 435 18526 24 0 0 chr5 159816410 159818564 -43266968 - L1P LINE L1 -1218 4928 2775 3122 38 31 2 chr5 159818540 159818962 -43266570 + L1P LINE L1 4912 5345 -801 * 27 29 0 0 chr5 159869816 159869850 -43215682 + AT_rich Low_complexity Low_complexity 1 34 0 2139 100 0 10 chr5 159871980 159872279 -43213253 + AluSq SINE Alu 1 296 -17 652 153 83 0 chr5 159872318 159872462 -43213070 + L1MD2 LINE L1 6202 6357 -2 192 329 106 0 chr5 159872606 159872691 -43212841 + MIR SINE MIR 169 262 0 309 331 24 24 chr5 159872778 159872902 -43212630 + L1ME4a LINE L1 5808 5931 -190 930 210 127 4 chr5 159872905 159873134 -43212398 + MIR SINE MIR 3 259 -3 228 276 117 35 chr5 159873146 159873291 -43212241 + L1ME4a LINE L1 5939 6095 -26 2290 73 0 0 chr5 159873314 159873601 -43211931 + AluY SINE Alu 2 288 -23 2179 101 0 3 chr5 159873616 159873922 -43211610 + AluSc SINE Alu 3 307 -2 391 116 29 14 chr5 159873933 159874002 -43211530 + L1MC4 LINE L1 7971 8040 -2 222 163 0 0 chr5 159875538 159875573 -43209959 + A-rich Low_complexity Low_complexity 1 38 -5 2095 129 0 3 chr5 159875573 159875884 -43209648 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr5 159876218 159876241 -43209291 + AT_rich Low_complexity Low_complexity 1 23 0 506 229 166 81 chr5 159876249 159876472 -43209060 - MIR SINE MIR -8 254 13 553 234 38 34 chr5 159877952 159878161 -43207371 - AluSq SINE Alu -101 212 3 808 168 14 146 chr5 159878161 159878250 -43207282 - AluJo SINE Alu -121 191 147 2360 48 3 19 chr5 159878250 159878559 -43206973 - AluY SINE Alu -7 304 1 808 168 14 146 chr5 159878559 159878689 -43206843 - AluJo SINE Alu -165 147 1 1858 145 0 10 chr5 159878703 159878869 -43206663 - AluJb SINE Alu -12 300 137 2167 81 13 3 chr5 159878869 159879167 -43206365 - AluY SINE Alu -10 301 1 1858 145 0 10 chr5 159879167 159879303 -43206229 - AluJb SINE Alu -175 137 1 550 293 47 14 chr5 159879343 159879558 -43205974 + L1MEc LINE L1 1517 1738 -4658 423 261 62 84 chr5 159879745 159879799 -43205733 + L1MEc LINE L1 1941 1995 -4220 2090 116 3 3 chr5 159879799 159880109 -43205423 - AluSx SINE Alu -2 310 1 423 261 62 84 chr5 159880109 159880150 -43205382 + L1MEc LINE L1 1995 2035 -4180 2203 98 0 19 chr5 159880150 159880465 -43205067 - AluSq SINE Alu -4 309 1 423 261 62 84 chr5 159880465 159880717 -43204815 + L1MEc LINE L1 2035 2239 -3976 554 202 17 98 chr5 159880926 159881099 -43204433 - LTR33 LTR ERVL -52 469 311 471 326 16 102 chr5 159881106 159881640 -43203892 + L2 LINE L2 2659 3120 -193 1519 140 0 0 chr5 159881640 159881869 -43203663 - AluJo SINE Alu -14 298 70 471 326 16 102 chr5 159881869 159881962 -43203570 + L2 LINE L2 3120 3219 -94 21 0 0 0 chr5 159882178 159882199 -43203333 + AT_rich Low_complexity Low_complexity 1 21 0 832 165 0 0 chr5 159882199 159882326 -43203206 - FLAM_C SINE Alu -6 127 1 240 156 0 0 chr5 159882897 159882918 -43202614 + (TAA)n Simple_repeat Simple_repeat 3 23 -24 2012 66 52 25 chr5 159882918 159883204 -43202328 + AluY SINE Alu 1 294 -17 240 156 0 0 chr5 159883204 159883227 -43202305 + (TAA)n Simple_repeat Simple_repeat 22 47 0 229 238 16 48 chr5 159883231 159883294 -43202238 - L2 LINE L2 -11 3261 3201 713 295 158 37 chr5 159883304 159883842 -43201690 + L2 LINE L2 2697 3313 0 518 271 17 72 chr5 159883851 159884032 -43201500 - MIR SINE MIR -90 172 2 782 53 0 0 chr5 159884063 159884157 -43201375 - AluS SINE Alu -217 96 3 474 285 35 28 chr5 159884161 159884305 -43201227 + L2 LINE L2 3169 3313 0 331 275 81 44 chr5 159884543 159884703 -43200829 - MIR SINE MIR -86 176 11 1833 162 0 3 chr5 159885379 159885675 -43199857 - AluJb SINE Alu -17 295 1 1115 165 35 39 chr5 159885893 159886123 -43199409 - AluJb SINE Alu -64 248 20 674 279 47 5 chr5 159886134 159886324 -43199208 - MIR SINE MIR -39 223 26 295 371 10 10 chr5 159886877 159886974 -43198558 + L2 LINE L2 3147 3243 -29 2187 77 0 13 chr5 159887084 159887384 -43198148 - AluSg1 SINE Alu -13 296 1 453 270 43 95 chr5 159887901 159888368 -43197164 + L2 LINE L2 2699 3215 -57 381 43 0 0 chr5 159888395 159888442 -43197090 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 2246 96 0 6 chr5 159890335 159890647 -43194885 - AluSx SINE Alu -2 310 1 185 352 152 32 chr5 159890830 159891140 -43194392 - L2 LINE L2 -660 2654 2308 821 303 161 16 chr5 159891144 159891630 -43193902 - LTR67 LTR ERVL 0 557 2 259 327 59 0 chr5 159891665 159891766 -43193766 - MIR SINE MIR 0 262 156 340 203 0 16 chr5 159891811 159891875 -43193657 + MER81 DNA DNA 11 73 -41 476 243 53 53 chr5 159891938 159892106 -43193426 + MIR SINE MIR 57 227 -35 2141 108 3 3 chr5 159892106 159892413 -43193119 - AluSq SINE Alu -6 307 1 476 243 53 53 chr5 159892413 159892450 -43193082 + MIR SINE MIR 226 262 0 1919 114 10 7 chr5 159892719 159893009 -43192523 + AluSx SINE Alu 1 291 -21 925 196 13 45 chr5 159893150 159893374 -43192158 + L1ME1 LINE L1 43 259 -6137 2011 123 3 0 chr5 159893544 159893837 -43191695 - AluSx SINE Alu -18 294 1 846 233 58 19 chr5 159893838 159894044 -43191488 - MER58A DNA MER1_type -8 216 3 3779 246 81 36 chr5 159894044 159895195 -43190337 + L1ME1 LINE L1 630 1859 -4537 2096 102 0 0 chr5 159895195 159895480 -43190052 + AluSc SINE Alu 21 305 -4 3779 246 81 36 chr5 159895480 159895768 -43189764 + L1ME1 LINE L1 1859 2133 -4263 526 237 8 0 chr5 159895769 159895887 -43189645 + L1MB7 LINE L1 6010 6128 -56 26 30 0 0 chr5 159895887 159895920 -43189612 + AT_rich Low_complexity Low_complexity 1 33 0 294 93 0 0 chr5 159895973 159896016 -43189516 + MADE1 DNA Mariner 1 43 -37 593 165 39 8 chr5 159896251 159896378 -43189154 - MER41B LTR ERV1 -88 547 417 1793 126 10 31 chr5 159896423 159896716 -43188816 - AluJo SINE Alu -25 287 1 287 209 0 0 chr5 159896717 159896784 -43188748 + L1MB8 LINE L1 6112 6178 0 391 161 0 32 chr5 159896795 159896888 -43188644 + L1ME1 LINE L1 2143 2232 -4164 1909 134 28 0 chr5 159896909 159897199 -43188333 + AluSx SINE Alu 1 298 -14 3116 197 51 5 chr5 159897309 159897980 -43187552 + L1ME1 LINE L1 5529 6230 -5 464 209 38 19 chr5 159898078 159898236 -43187296 + Charlie7 DNA MER1_type 2446 2606 -6 2257 125 6 8 chr5 159898365 159898718 -43186814 + MER41B LTR ERV1 196 547 -88 2061 105 171 23 chr5 159899165 159899517 -43186015 + MSTA LTR MaLR 1 404 -24 394 103 39 77 chr5 159899517 159899595 -43185937 + MSTA LTR MaLR 354 428 0 1672 104 19 23 chr5 159900257 159900517 -43185015 + L1PA10 LINE L1 5907 6165 -3 252 0 0 0 chr5 159900743 159900771 -43184761 + (T)n Simple_repeat Simple_repeat 1 28 0 648 348 29 11 chr5 159900777 159901050 -43184482 + MLT1K LTR MaLR 75 352 -236 294 220 0 99 chr5 159901076 159901167 -43184365 - MIR SINE MIR -31 231 150 1074 250 32 4 chr5 159901176 159901424 -43184108 + MIR SINE MIR 4 258 -4 429 259 54 68 chr5 159901425 159901551 -43183981 - MIR SINE MIR -106 156 31 2480 61 0 3 chr5 159901551 159901861 -43183671 - AluY SINE Alu -2 309 1 429 259 54 68 chr5 159901861 159901881 -43183651 - MIR SINE MIR -231 31 12 413 213 19 65 chr5 159901895 159902050 -43183482 + MLT1K LTR MaLR 350 497 -91 1562 83 13 22 chr5 159902060 159902290 -43183242 - L1MA2 LINE L1 -4 6300 6073 257 151 170 0 chr5 159902513 159902566 -43182966 - L2 LINE L2 0 3272 3211 2255 92 0 7 chr5 159902711 159903014 -43182518 + AluSx SINE Alu 1 301 -11 545 271 115 49 chr5 159904346 159904693 -43180839 - L2 LINE L2 0 3313 2944 470 310 18 0 chr5 159904779 159904892 -43180640 - L2 LINE L2 -8 3305 3191 2121 132 0 0 chr5 159905234 159905538 -43179994 + AluSx SINE Alu 1 304 -8 590 328 62 12 chr5 159905562 159905806 -43179726 + MIR SINE MIR 6 261 -1 431 366 54 0 chr5 159906330 159906516 -43179016 + MIR SINE MIR 23 218 -44 1627 166 3 46 chr5 159906808 159907134 -43178398 - AluJo SINE Alu 0 312 1 457 247 176 11 chr5 159907273 159907455 -43178077 - L2 LINE L2 -89 3224 3013 299 353 29 39 chr5 159907789 159907993 -43177539 - MIR SINE MIR 0 262 61 591 296 19 12 chr5 159907994 159908156 -43177376 - MIR SINE MIR -90 172 10 2192 93 3 3 chr5 159908989 159909299 -43176233 + AluSp SINE Alu 1 310 -3 181 355 37 9 chr5 159909391 159909498 -43176034 - MIR SINE MIR -55 153 44 399 162 0 0 chr5 159909736 159909804 -43175728 - AluJ/FRAM SINE Alu -5 297 230 2110 172 63 29 chr5 159909804 159910217 -43175315 + MER66B LTR ERV1 1 427 -59 281 209 0 0 chr5 159910210 159910253 -43175279 - AluSg/x SINE Alu -123 179 137 * 2135 99 14 0 chr5 159910283 159910576 -43174956 - AluSx SINE Alu -15 297 1 237 231 62 0 chr5 159910576 159910641 -43174891 + Charlie8 DNA MER1_type 63 131 -2286 898 156 0 0 chr5 159910641 159910776 -43174756 + AluJo SINE Alu 1 135 -177 714 240 14 0 chr5 159910790 159910936 -43174596 + Charlie8 DNA MER1_type 118 265 -2152 481 283 159 46 chr5 159911899 159912245 -43173287 - L2 LINE L2 -54 3259 2875 636 271 97 64 chr5 159913277 159913663 -43171869 + L2 LINE L2 2674 3085 -228 2127 98 3 0 chr5 159913663 159913948 -43171584 - AluSc SINE Alu -23 286 1 636 271 97 64 chr5 159913948 159914180 -43171352 + L2 LINE L2 3085 3308 -5 848 201 152 69 chr5 159914186 159914549 -43170983 + L1MC4 LINE L1 7525 7917 -125 25 31 0 0 chr5 159914620 159914652 -43170880 + AT_rich Low_complexity Low_complexity 1 32 0 1778 126 7 4 chr5 159914652 159914922 -43170610 + AluSq SINE Alu 7 277 -36 180 0 0 0 chr5 159914925 159914945 -43170587 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 215 308 0 87 chr5 159914990 159915031 -43170501 - MIR SINE MIR -96 112 69 1571 157 3 70 chr5 159915031 159915183 -43170349 + AluJo SINE Alu 3 125 -187 2129 107 3 3 chr5 159915183 159915491 -43170041 + AluSx SINE Alu 1 308 -4 1571 157 3 70 chr5 159915491 159915651 -43169881 + AluJo SINE Alu 125 294 -18 215 308 0 87 chr5 159915651 159915713 -43169819 - MIR SINE MIR -139 69 18 370 270 11 0 chr5 159916144 159916233 -43169299 + L2 LINE L2 2987 3076 -196 184 327 35 18 chr5 159916968 159917081 -43168451 + MIR SINE MIR 37 151 -111 275 274 255 0 chr5 159917716 159917818 -43167714 + L2 LINE L2 3140 3267 -5 568 330 71 6 chr5 159919508 159919754 -43165778 + MIR SINE MIR 5 262 0 247 369 48 10 chr5 159919995 159920098 -43165434 + L3 LINE CR1 437 543 -1034 283 337 11 0 chr5 159920214 159920309 -43165223 + MER103 DNA DNA 71 166 0 954 177 17 11 chr5 159920324 159920499 -43165033 - L1PB4 LINE L1 -5 6151 5976 417 183 226 0 chr5 159920561 159920654 -43164878 + FLAM_A SINE Alu 2 115 -27 394 243 268 47 chr5 159920760 159921036 -43164496 + L3 LINE CR1 575 911 -666 1524 178 3 50 chr5 159921127 159921447 -43164085 + AluJo SINE Alu 1 305 -7 283 354 123 14 chr5 159921604 159921816 -43163716 + L3 LINE CR1 949 1183 -394 2237 86 0 13 chr5 159921850 159922152 -43163380 + AluSg SINE Alu 1 298 -12 539 331 59 40 chr5 159922443 159922715 -43162817 + L3 LINE CR1 1283 1559 -18 420 230 0 0 chr5 159922718 159922792 -43162740 + MER5A DNA MER1_type 9 82 -107 1076 178 40 43 chr5 159923167 159923420 -43162112 - AluJo SINE Alu -12 300 49 742 268 67 25 chr5 159923432 159923671 -43161861 - MIR SINE MIR 0 262 14 24 53 0 0 chr5 159925051 159925089 -43160443 + AT_rich Low_complexity Low_complexity 1 38 0 2159 103 7 0 chr5 159925344 159925645 -43159887 - AluSx SINE Alu -9 303 1 202 302 198 0 chr5 159925720 159925816 -43159716 + MIR SINE MIR 52 166 -96 416 259 45 75 chr5 159925974 159926148 -43159384 - Charlie8 DNA MER1_type -2137 280 111 2084 121 0 3 chr5 159926148 159926455 -43159077 - AluSq SINE Alu -7 306 1 416 259 45 75 chr5 159926455 159926481 -43159051 - Charlie8 DNA MER1_type -2306 111 86 746 281 25 25 chr5 159926485 159926688 -43158844 + MIR SINE MIR 2 204 -58 332 109 0 0 chr5 159926694 159926749 -43158783 + FLAM_A SINE Alu 79 133 0 4357 161 11 26 chr5 159926753 159927564 -43157968 + L1MB1 LINE L1 5324 6122 -46 2007 113 14 7 chr5 159927564 159927857 -43157675 + AluSq SINE Alu 1 295 -18 1985 147 0 0 chr5 159927868 159928180 -43157352 + AluSx SINE Alu 1 312 0 2088 118 3 0 chr5 159928187 159928493 -43157039 + AluSp SINE Alu 1 307 -6 534 221 50 0 chr5 159928555 159928680 -43156852 - L1ME LINE L1 -373 5789 5651 817 191 0 20 chr5 159928788 159928940 -43156592 - AluJb SINE Alu -6 306 158 22 0 0 0 chr5 159928941 159928963 -43156569 + AT_rich Low_complexity Low_complexity 1 22 0 399 146 42 0 chr5 159928963 159929107 -43156425 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 38 0 0 0 chr5 159929107 159929145 -43156387 + AT_rich Low_complexity Low_complexity 1 38 0 2353 57 7 3 chr5 159929162 159929458 -43156074 - AluY SINE Alu -14 297 1 522 166 90 0 chr5 159929789 159929934 -43155598 - MER20B DNA MER1_type -94 689 532 609 261 113 10 chr5 159930050 159930245 -43155287 - MER20B DNA MER1_type -539 244 30 478 152 0 22 chr5 159930245 159930337 -43155195 + L1M4 LINE L1 4995 5084 -1062 204 40 0 0 chr5 159930372 159930397 -43155135 + (CA)n Simple_repeat Simple_repeat 2 26 0 1751 224 35 18 chr5 159930430 159930920 -43154612 + L1M4 LINE L1 4053 4550 -1596 1543 284 82 15 chr5 159930958 159931520 -43154012 - L2 LINE L2 -2 3311 2679 1607 171 16 13 chr5 159931520 159931824 -43153708 - AluJo SINE Alu -7 305 1 1543 284 82 15 chr5 159931824 159932009 -43153523 - L2 LINE L2 -634 2679 2508 387 318 60 13 chr5 159933488 159933639 -43151893 + MIR SINE MIR 8 165 -97 2155 100 0 10 chr5 159933763 159934064 -43151468 + AluSq SINE Alu 1 298 -15 652 153 83 0 chr5 159934103 159934247 -43151285 + L1MD2 LINE L1 6202 6357 -2 192 329 106 0 chr5 159934391 159934476 -43151056 + MIR SINE MIR 169 262 0 309 331 24 24 chr5 159934563 159934687 -43150845 + L1ME4a LINE L1 5808 5931 -190 932 210 127 4 chr5 159934690 159934919 -43150613 + MIR SINE MIR 3 259 -3 228 276 117 35 chr5 159934931 159935076 -43150456 + L1ME4a LINE L1 5939 6095 -26 2073 115 0 3 chr5 159935099 159935395 -43150137 + AluSg SINE Alu 2 296 -14 471 307 98 19 chr5 159936807 159937022 -43148510 + MIR SINE MIR 17 248 -14 280 191 132 0 chr5 159937203 159937271 -43148261 - L2 LINE L2 -49 3223 3147 2085 93 0 7 chr5 159937551 159937831 -43147701 - AluSc SINE Alu -31 278 1 3220 165 28 7 chr5 159938030 159938575 -43146957 - MLT1F1 LTR MaLR 0 567 12 2230 99 0 10 chr5 159938633 159938947 -43146585 - AluSx SINE Alu -1 311 1 1672 184 7 3 chr5 159938978 159939287 -43146245 - AluJo SINE Alu -2 310 1 228 286 209 19 chr5 159939427 159939532 -43146000 + L2 LINE L2 3148 3272 0 655 274 25 0 chr5 159939538 159939695 -43145837 - MIR SINE MIR -70 192 32 235 262 112 19 chr5 159940483 159940590 -43144942 + MIR SINE MIR 33 149 -113 2035 116 0 3 chr5 159940733 159941027 -43144505 + AluSx SINE Alu 3 295 -17 482 282 64 37 chr5 159941043 159941231 -43144301 + Charlie8 DNA MER1_type 84 276 -2141 2062 115 0 16 chr5 159941586 159941891 -43143641 + AluSq SINE Alu 1 300 -13 2051 100 0 11 chr5 159941969 159942284 -43143248 - AluSx SINE Alu 0 316 5 2009 116 0 29 chr5 159942302 159942613 -43142919 - AluSx SINE Alu -10 302 1 21 36 0 0 chr5 159942678 159942706 -43142826 + AT_rich Low_complexity Low_complexity 1 28 0 868 238 11 0 chr5 159942728 159942909 -43142623 + MER58A DNA MER1_type 42 224 0 2167 97 0 47 chr5 159943028 159943169 -43142363 + AluSq SINE Alu 1 147 -166 2147 84 0 0 chr5 159943169 159943482 -43142050 + AluY SINE Alu 8 320 0 2167 97 0 47 chr5 159943482 159943659 -43141873 + AluSq SINE Alu 147 305 -8 278 253 99 99 chr5 159944375 159944528 -43141004 + MIR3 SINE MIR 1 156 -52 811 229 5 0 chr5 159944528 159944716 -43140816 - MER5A DNA MER1_type 0 189 1 278 253 99 99 chr5 159944716 159944764 -43140768 + MIR3 SINE MIR 155 202 -6 2389 128 0 22 chr5 159946222 159946589 -43138943 - MER47A DNA MER2_type 0 366 8 201 258 0 0 chr5 159946659 159946725 -43138807 + GA-rich Low_complexity Low_complexity 4 69 0 1917 133 4 0 chr5 159946794 159947073 -43138459 + AluSx SINE Alu 1 280 -32 208 154 26 0 chr5 159947104 159947143 -43138389 + GA-rich Low_complexity Low_complexity 3 42 0 1950 102 78 0 chr5 159947338 159947622 -43137910 - AluSg SINE Alu -4 306 1 180 0 0 0 chr5 159948682 159948702 -43136830 + (CAGCC)n Simple_repeat Simple_repeat 2 21 0 275 266 44 44 chr5 159948779 159948892 -43136640 + MIR SINE MIR 3 115 -147 2314 94 0 0 chr5 159948942 159949251 -43136281 - AluSg SINE Alu -1 309 1 226 274 103 60 chr5 159949653 159949753 -43135779 + MIR3 SINE MIR 39 146 -62 1761 175 37 65 chr5 159949753 159950154 -43135378 + MLT1B LTR MaLR 1 390 0 226 274 103 60 chr5 159950154 159950170 -43135362 + MIR3 SINE MIR 146 160 -48 607 300 42 0 chr5 159950498 159950701 -43134831 - MIR SINE MIR -8 254 45 352 284 24 48 chr5 159951086 159951336 -43134196 + L1ME3A LINE L1 4181 4424 -1722 767 227 8 0 chr5 159951349 159951512 -43134020 + MLT1B LTR MaLR 188 354 -42 1703 162 17 3 chr5 159951513 159951803 -43133729 + AluSx SINE Alu 1 294 -18 2437 124 18 71 chr5 159951839 159952289 -43133243 - MSTB1 LTR MaLR 0 432 7 1069 185 44 35 chr5 159952329 159952556 -43132976 + AluJo SINE Alu 50 278 -34 1465 269 47 48 chr5 159952588 159952693 -43132839 + L1ME3A LINE L1 4490 4594 -1576 2410 43 3 3 chr5 159952693 159952993 -43132539 - AluY SINE Alu -11 300 1 1465 269 47 48 chr5 159952993 159953343 -43132189 + L1ME3A LINE L1 4594 4943 -1227 1943 135 0 7 chr5 159953343 159953680 -43131852 + AluSx SINE Alu 7 312 0 1465 269 47 48 chr5 159953680 159953897 -43131635 + L1ME3A LINE L1 4943 5159 -1011 2236 84 17 0 chr5 159953897 159954196 -43131336 + AluSg SINE Alu 1 304 -6 1465 269 47 48 chr5 159954196 159954451 -43131081 + L1ME3A LINE L1 5159 5413 -757 1790 150 13 10 chr5 159954451 159954757 -43130775 + AluJo SINE Alu 1 307 -5 1465 269 47 48 chr5 159954757 159955043 -43130489 + L1ME3A LINE L1 5413 5707 -463 251 229 16 0 chr5 159955053 159955114 -43130418 - MER96 DNA MER1_type? 0 175 114 1194 248 107 39 chr5 159955175 159955299 -43130233 + MLT1D LTR MaLR 3 117 -388 2386 39 0 0 chr5 159955299 159955609 -43129923 - AluY SINE Alu 0 310 1 1194 248 107 39 chr5 159955609 159955951 -43129581 + MLT1D LTR MaLR 117 502 -3 701 229 69 5 chr5 159955987 159956211 -43129321 + L1ME3A LINE L1 5710 5947 -223 1145 232 136 90 chr5 159956815 159956904 -43128628 + HAL1 LINE L1 7 90 -2417 2159 93 13 0 chr5 159956904 159957205 -43128327 + AluSp SINE Alu 1 305 -8 1145 232 136 90 chr5 159957205 159957457 -43128075 + HAL1 LINE L1 90 329 -2178 2412 137 53 94 chr5 159957457 159957968 -43127564 + LTR2B LTR ERV1 1 490 0 1145 232 136 90 chr5 159957968 159958250 -43127282 + HAL1 LINE L1 329 660 -1847 200 164 33 98 chr5 159959352 159959413 -43126119 - MIR SINE MIR 0 262 206 * 458 218 35 0 chr5 159959386 159959473 -43126059 - L2 LINE L2 -36 3277 3188 275 254 24 192 chr5 159959554 159959636 -43125896 + MIR SINE MIR 20 114 -148 1711 170 3 13 chr5 159959636 159959947 -43125585 - AluJo SINE Alu 0 312 5 275 254 24 192 chr5 159959947 159960155 -43125377 + MIR SINE MIR 114 261 -1 1569 96 0 9 chr5 159960199 159960428 -43125104 - AluSc SINE Alu 0 309 83 1846 107 110 29 chr5 159960844 159961189 -43124343 - THE1C LTR MaLR -2 373 1 950 148 0 31 chr5 159961269 159961406 -43124126 + AluJb SINE Alu 1 134 -178 2274 95 0 3 chr5 159961406 159961712 -43123820 + AluSq SINE Alu 1 305 -8 950 148 0 31 chr5 159961712 159961736 -43123796 + AluJb SINE Alu 134 157 -155 190 303 61 15 chr5 159962387 159962453 -43123079 + L2 LINE L2 3174 3242 -30 556 272 84 21 chr5 159962455 159962646 -43122886 - LTR33 LTR ERVL 0 521 319 743 249 6 0 chr5 159962684 159962853 -43122679 - LTR33 LTR ERVL -351 170 1 466 294 70 0 chr5 159962956 159963161 -43122371 - MIR SINE MIR -1 261 42 396 103 0 0 chr5 159963165 159963223 -43122309 + (TTCA)n Simple_repeat Simple_repeat 3 60 0 1824 137 3 7 chr5 159963223 159963508 -43122024 - AluSx SINE Alu -28 284 1 286 279 27 34 chr5 159963529 159963676 -43121856 - L1MC4 LINE L1 0 8042 7897 4305 173 15 48 chr5 159963705 159963906 -43121626 - L1MB3 LINE L1 -2 6181 5975 1775 84 28 99 chr5 159963906 159964210 -43121322 + AluSg SINE Alu 1 282 -28 228 35 0 0 chr5 159964210 159964239 -43121293 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 1775 84 28 99 chr5 159964239 159964256 -43121276 + AluSg SINE Alu 282 299 -11 4305 173 15 48 chr5 159964256 159964932 -43120600 - L1MB3 LINE L1 -208 5975 5332 1950 128 3 3 chr5 159964932 159965230 -43120302 - AluSx SINE Alu -14 298 1 4305 173 15 48 chr5 159965230 159965260 -43120272 - L1MB3 LINE L1 -851 5332 5303 369 242 44 101 chr5 159965307 159965521 -43120011 - L1MC5 LINE L1 -227 7734 7534 2323 97 0 0 chr5 159965521 159965832 -43119700 - AluSp SINE Alu -1 312 2 369 242 44 101 chr5 159965832 159965865 -43119667 - L1MC5 LINE L1 -427 7534 7501 1082 145 0 0 chr5 159965880 159966046 -43119486 - AluJb SINE Alu -19 293 128 1692 138 75 0 chr5 159966048 159966330 -43119202 - AluSx SINE Alu -9 303 1 2348 77 0 6 chr5 159966376 159966689 -43118843 - AluY SINE Alu 0 311 1 335 241 102 75 chr5 159966720 159966907 -43118625 - L1MC5 LINE L1 -520 7441 7250 2489 52 7 0 chr5 159967034 159967343 -43118189 + AluY SINE Alu 1 311 0 249 33 0 0 chr5 159967671 159967701 -43117831 + (T)n Simple_repeat Simple_repeat 1 30 0 230 250 31 16 chr5 159967701 159967765 -43117767 - MLT1K LTR MaLR -4 584 520 751 152 122 30 chr5 159968334 159968498 -43117034 - MER97a DNA MER1_type? -715 179 1 1428 176 4 11 chr5 159969123 159969385 -43116147 + AluJo SINE Alu 1 260 -52 215 348 14 0 chr5 159969385 159969454 -43116078 + MIR SINE MIR 53 122 -140 2246 102 0 0 chr5 159969454 159969757 -43115775 - AluSx SINE Alu -9 303 1 2747 180 21 31 chr5 159969766 159970348 -43115184 - L1MB7 LINE L1 -74 6110 5535 341 282 12 0 chr5 159970361 159970446 -43115086 + MIR SINE MIR 154 239 -23 1415 151 0 17 chr5 159970451 159970683 -43114849 - AluJb SINE Alu -84 228 1 1699 94 54 0 chr5 159970777 159971000 -43114532 - AluSg/x SINE Alu -13 299 65 315 244 51 70 chr5 159972394 159972572 -43112960 - MIR SINE MIR -12 250 75 * 947 299 115 17 chr5 159972544 159973095 -43112437 + L2 LINE L2 2691 3312 -1 325 234 36 72 chr5 159973096 159973207 -43112325 - MIR SINE MIR -111 151 45 182 286 57 14 chr5 159973962 159974032 -43111500 + MIR SINE MIR 58 130 -78 2435 97 0 0 chr5 159974076 159974375 -43111157 - AluSg SINE Alu -11 299 1 2499 79 3 3 chr5 159974393 159974696 -43110836 - AluSp SINE Alu -10 303 1 1722 131 4 0 chr5 159974701 159974945 -43110587 - AluSx SINE Alu -13 299 55 2111 112 0 14 chr5 159975366 159975653 -43109879 - AluSx SINE Alu -29 283 1 2324 89 0 0 chr5 159976024 159976362 -43109170 - AluSx SINE Alu 0 338 1 624 298 39 43 chr5 159976587 159976869 -43108663 + L2 LINE L2 3019 3299 -14 381 258 11 22 chr5 159977144 159977233 -43108299 - L2 LINE L2 -39 3233 3146 301 241 51 0 chr5 159977444 159977523 -43108009 + MIR SINE MIR 102 184 -78 631 289 83 0 chr5 159977545 159977749 -43107783 - MIR SINE MIR 0 262 42 284 81 0 0 chr5 159978694 159978731 -43106801 + L3 LINE CR1 1426 1462 -115 2050 139 7 0 chr5 159978777 159979079 -43106453 - AluSx SINE Alu 0 304 1 1555 140 69 57 chr5 159979152 159979231 -43106301 + MER44D DNA MER2_type 1 78 -2413 2247 104 26 7 chr5 159979231 159979538 -43105994 + AluSq SINE Alu 1 313 0 1555 140 69 57 chr5 159979538 159979559 -43105973 + MER44D DNA MER2_type 78 97 -2394 1469 119 45 0 chr5 159979559 159979761 -43105771 + AluSg/x SINE Alu 82 292 -18 1555 140 69 57 chr5 159979761 159979994 -43105538 + MER44D DNA MER2_type 97 609 0 250 234 0 0 chr5 159980044 159980091 -43105441 + MIR SINE MIR 79 125 -83 877 202 35 117 chr5 159980363 159980506 -43105026 + MIR SINE MIR 16 169 -93 399 198 264 0 chr5 159980506 159980636 -43104896 + FLAM_C SINE Alu 2 155 0 2504 84 0 6 chr5 159980639 159980950 -43104582 + AluSg SINE Alu 1 309 -1 877 202 35 117 chr5 159980950 159981058 -43104474 + MIR SINE MIR 171 251 -11 1773 158 11 7 chr5 159981178 159981450 -43104082 - AluJo SINE Alu -37 275 3 2099 103 14 3 chr5 159981475 159981765 -43103767 - AluSq SINE Alu -20 293 1 1904 156 3 26 chr5 159981767 159982069 -43103463 - AluJo SINE Alu -17 295 1 467 305 132 12 chr5 159982073 159982240 -43103292 - MIR SINE MIR -60 202 16 284 306 151 30 chr5 159984127 159984203 -43101329 + L2 LINE L2 3083 3148 -165 2000 152 0 13 chr5 159984203 159984519 -43101013 - AluJb SINE Alu 0 312 1 284 306 151 30 chr5 159984519 159984641 -43100891 + L2 LINE L2 3148 3305 -8 216 67 0 0 chr5 159984647 159984677 -43100855 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 890 128 0 23 chr5 159984714 159984847 -43100685 + FLAM_C SINE Alu 2 131 -2 1839 197 51 6 chr5 159984936 159985677 -43099855 + L1MD2 LINE L1 4903 5667 -692 1124 87 7 0 chr5 159985684 159985822 -43099710 + AluSq/x SINE Alu 5 143 -169 2276 108 10 7 chr5 159985822 159986129 -43099403 + AluSq SINE Alu 1 308 -5 1563 195 149 81 chr5 159986130 159986246 -43099286 + L1MD2 LINE L1 5668 5775 -584 2277 114 0 0 chr5 159986246 159986545 -43098987 + AluSx SINE Alu 5 303 -9 1563 195 149 81 chr5 159986545 159987013 -43098519 + L1MD2 LINE L1 5775 6300 -59 2113 141 0 0 chr5 159987013 159987310 -43098222 - AluSx SINE Alu -15 297 1 1563 195 149 81 chr5 159987310 159987354 -43098178 + L1MD2 LINE L1 6300 6340 -19 1151 225 18 61 chr5 159987594 159987936 -43097596 - HERV16 LTR ERVL -2889 2107 1781 961 70 0 0 chr5 159987945 159988060 -43097472 - AluSq/x SINE Alu -198 115 1 879 271 97 30 chr5 159988092 159988391 -43097141 - HERV16 LTR ERVL -3655 1341 1023 878 282 78 27 chr5 159988424 159989102 -43096430 - HERV16 LTR ERVL -4044 952 186 564 326 61 14 chr5 159989238 159989517 -43096015 - LTR16A LTR ERVL 0 450 159 2429 104 0 0 chr5 159990680 159990988 -43094544 - AluSx SINE Alu -4 308 1 308 235 147 0 chr5 159991045 159991147 -43094385 + MLT2F LTR ERVL 1 117 -546 1143 196 143 10 chr5 159991174 159991475 -43094057 + MLT2F LTR ERVL 254 594 -69 495 95 0 0 chr5 159991477 159991551 -43093981 + (TC)n Simple_repeat Simple_repeat 1 74 0 348 329 59 27 chr5 159991667 159991885 -43093647 - L1ME LINE L1 -349 5772 5547 268 80 9 17 chr5 159992322 159992548 -43092984 + AluSx SINE Alu 1 299 -1 1702 201 109 17 chr5 159992682 159993608 -43091924 - L1MC4 LINE L1 -383 7659 6467 559 262 158 6 chr5 159994184 159994348 -43091184 - L2 LINE L2 -627 2687 2499 2456 80 0 3 chr5 159994447 159994748 -43090784 + AluSx SINE Alu 1 300 -12 765 165 119 23 chr5 159995417 159995611 -43089921 - L1MA4A LINE L1 -1 6302 6128 2042 94 4 0 chr5 159995611 159995866 -43089666 + AluSx SINE Alu 48 303 -9 765 165 119 23 chr5 159995866 159995877 -43089655 - L1MA4A LINE L1 -175 6128 6119 827 172 0 8 chr5 159995877 159996011 -43089521 + FLAM_C SINE Alu 1 133 0 765 165 119 23 chr5 159996011 159996064 -43089468 - L1MA4A LINE L1 -184 6119 6018 703 102 0 37 chr5 159996917 159997025 -43088507 - AluSq/x SINE Alu -179 133 30 2549 87 0 0 chr5 159997729 159998039 -43087493 + AluSx SINE Alu 1 310 -2 2250 109 3 22 chr5 159998041 159998352 -43087180 + AluSp SINE Alu 2 306 -7 2393 104 0 0 chr5 159998420 159998727 -43086805 - AluSx SINE Alu -5 307 1 29 60 0 0 chr5 159998960 159999010 -43086522 + AT_rich Low_complexity Low_complexity 1 50 0 1559 176 66 7 chr5 159999103 159999392 -43086140 + AluJo SINE Alu 1 306 -6 2106 155 0 0 chr5 159999408 159999718 -43085814 - AluSx SINE Alu -2 310 1 1863 169 10 7 chr5 160000151 160000447 -43085085 - AluJb SINE Alu -14 298 2 404 347 64 18 chr5 160000533 160000752 -43084780 + MIR SINE MIR 24 252 -10 782 199 0 0 chr5 160000773 160000909 -43084623 + FLAM_C SINE Alu 2 137 -6 315 250 113 75 chr5 160001269 160001429 -43084103 - MARNA DNA Mariner -179 407 242 338 310 106 35 chr5 160002580 160002919 -43082613 + MLT1K LTR MaLR 4 366 -222 2275 109 0 6 chr5 160003050 160003361 -43082171 - AluSg SINE Alu -1 309 1 1039 171 105 0 chr5 160004043 160004077 -43081455 + AluJo SINE Alu 90 119 -193 360 0 0 0 chr5 160004077 160004117 -43081415 + (TG)n Simple_repeat Simple_repeat 1 40 0 1039 171 105 0 chr5 160004117 160004263 -43081269 + AluJo SINE Alu 119 289 -23 286 316 145 7 chr5 160004276 160004428 -43081104 + L1MC4a LINE L1 5377 5549 -629 507 216 61 20 chr5 160004483 160004718 -43080814 + MLT1H LTR MaLR 75 389 -206 343 174 49 11 chr5 160004773 160004861 -43080671 + MLT1H LTR MaLR 452 595 0 414 280 85 59 chr5 160004861 160005046 -43080486 + L1MC4a LINE L1 5694 5893 -228 2213 83 24 3 chr5 160005046 160005336 -43080196 - AluSc SINE Alu -13 296 1 414 280 85 59 chr5 160005336 160005457 -43080075 + L1MC4a LINE L1 5893 6009 -112 255 125 0 0 chr5 160005546 160005586 -43079946 + (TCC)n Simple_repeat Simple_repeat 3 42 0 * 608 95 9 26 chr5 160005582 160005588 -43079944 + (TTCC)n Simple_repeat Simple_repeat 2 7 -108 2312 111 7 0 chr5 160005588 160005895 -43079637 - AluSg SINE Alu -1 309 1 608 95 9 26 chr5 160005895 160006004 -43079528 + (TTCC)n Simple_repeat Simple_repeat 7 115 0 311 306 100 38 chr5 160006186 160006346 -43079186 - MIR SINE MIR -73 189 20 273 297 40 0 chr5 160006448 160006522 -43079010 + MIR SINE MIR 47 123 -139 279 311 63 53 chr5 160006523 160006713 -43078819 - L2 LINE L2 -7 3306 3115 868 191 20 0 chr5 160006715 160006867 -43078665 + AluJb SINE Alu 137 291 -21 320 154 31 0 chr5 160006867 160006932 -43078600 + GA-rich Low_complexity Low_complexity 1 67 0 319 380 8 0 chr5 160006948 160007069 -43078463 + MIR SINE MIR 116 237 -25 1315 128 0 0 chr5 160009521 160009700 -43075832 + AluSg/x SINE Alu 124 302 -8 2377 100 3 0 chr5 160009708 160010019 -43075513 + AluSq SINE Alu 2 313 0 246 254 14 14 chr5 160010085 160010156 -43075376 + GA-rich Low_complexity Low_complexity 4 74 0 626 284 69 14 chr5 160010212 160010430 -43075102 + MIR SINE MIR 31 260 -2 245 281 18 0 chr5 160010997 160011054 -43074478 + L2 LINE L2 3249 3306 -7 203 345 11 23 chr5 160011253 160011340 -43074192 + L2 LINE L2 3182 3267 -5 707 273 33 0 chr5 160011605 160011788 -43073744 - MIR SINE MIR -3 259 71 257 329 127 60 chr5 160011801 160011970 -43073562 + L2 LINE L2 2828 2984 -288 1678 131 53 108 chr5 160011970 160012018 -43073514 - THE1C LTR MaLR 0 375 326 2332 109 0 0 chr5 160012018 160012320 -43073212 - AluSx SINE Alu -10 302 1 1678 131 53 108 chr5 160012320 160012668 -43072864 - THE1C LTR MaLR -49 326 1 257 329 127 60 chr5 160012668 160012914 -43072618 + L2 LINE L2 2984 3271 -1 2151 123 3 10 chr5 160013708 160014008 -43071524 - AluJo SINE Alu -14 298 1 22 56 0 0 chr5 160015117 160015153 -43070379 + AT_rich Low_complexity Low_complexity 1 36 0 2274 105 0 0 chr5 160015161 160015456 -43070076 + AluSg SINE Alu 1 295 -15 2215 124 3 0 chr5 160015718 160016017 -43069515 - AluSx SINE Alu -12 300 1 386 266 167 18 chr5 160016188 160016369 -43069163 + MIR SINE MIR 4 202 -27 1635 167 0 0 chr5 160017030 160017270 -43068262 + AluJb SINE Alu 39 278 -34 245 309 0 36 chr5 160017277 160017387 -43068145 + L1MC4 LINE L1 7217 7322 -720 2297 97 0 13 chr5 160017531 160017831 -43067701 - AluSg SINE Alu -14 296 1 27 0 0 0 chr5 160017842 160017869 -43067663 + AT_rich Low_complexity Low_complexity 1 27 0 2100 125 0 10 chr5 160019716 160020013 -43065519 - AluSx SINE Alu -18 294 1 1992 155 0 31 chr5 160020059 160020381 -43065151 - AluJo SINE Alu 0 312 1 2579 98 28 94 chr5 160020442 160020851 -43064681 + MSTA LTR MaLR 1 378 -50 2437 92 3 0 chr5 160020851 160021155 -43064377 - AluSc SINE Alu -4 305 1 2579 98 28 94 chr5 160021155 160021203 -43064329 + MSTA LTR MaLR 378 428 0 539 168 92 59 chr5 160021225 160021329 -43064203 + MER39 LTR ERV1 3 113 -594 2391 88 3 3 chr5 160021329 160021636 -43063896 - AluY SINE Alu -4 307 1 539 168 92 59 chr5 160021636 160021650 -43063882 + MER39 LTR ERV1 113 125 -582 1358 196 107 52 chr5 160021653 160021819 -43063713 + MER39 LTR ERV1 340 495 -212 1596 167 52 0 chr5 160021819 160022088 -43063444 + AluSx SINE Alu 1 317 0 232 88 0 0 chr5 160022088 160022122 -43063410 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 1358 196 107 52 chr5 160022122 160022150 -43063382 + MER39 LTR ERV1 495 520 -187 2309 80 27 0 chr5 160022150 160022450 -43063082 - AluSp SINE Alu -4 309 2 1358 196 107 52 chr5 160022450 160022600 -43062932 + MER39 LTR ERV1 520 705 -2 400 311 50 12 chr5 160022962 160023123 -43062409 + MIR SINE MIR 2 168 -94 1583 173 91 40 chr5 160023913 160024265 -43061267 + MLT1A2 LTR MaLR 1 370 -4 486 211 102 14 chr5 160024338 160024485 -43061047 + L1ME4a LINE L1 5947 6106 -15 2441 88 3 0 chr5 160025122 160025428 -43060104 - AluSp SINE Alu -6 307 1 200 35 35 0 chr5 160025652 160025681 -43059851 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 201 147 0 0 chr5 160025690 160025724 -43059808 + (T)n Simple_repeat Simple_repeat 1 34 0 1172 120 6 22 chr5 160026801 160026984 -43058548 - AluSg/x SINE Alu -11 301 122 21 0 0 0 chr5 160027085 160027106 -43058426 + AT_rich Low_complexity Low_complexity 1 21 0 548 276 168 5 chr5 160027301 160027504 -43058028 + MIR SINE MIR 26 261 -1 2490 65 0 7 chr5 160028391 160028701 -43056831 - AluY SINE Alu -3 308 1 1951 134 49 0 chr5 160028749 160029033 -43056499 - AluSx SINE Alu -12 300 3 399 284 169 7 chr5 160029104 160029252 -43056280 + MER5A DNA MER1_type 12 183 -6 286 286 185 21 chr5 160029716 160029905 -43055627 + MIR SINE MIR 41 260 -2 433 316 78 10 chr5 160030416 160030609 -43054923 + MIR SINE MIR 57 262 0 2426 48 42 0 chr5 160030863 160031152 -43054380 + AluY SINE Alu 1 301 -10 2190 116 0 0 chr5 160031159 160031460 -43054072 + AluSq SINE Alu 1 301 -12 2247 96 3 10 chr5 160032538 160032852 -43052680 + AluSq SINE Alu 1 312 -1 277 297 11 11 chr5 160033735 160033826 -43051706 - MIR SINE MIR -126 136 46 325 227 80 0 chr5 160035842 160035917 -43049615 - L3b LINE CR1 -80 1503 1423 2216 98 20 3 chr5 160036077 160036373 -43049159 - AluSx SINE Alu -10 302 2 21 36 0 0 chr5 160038615 160038643 -43046889 + AT_rich Low_complexity Low_complexity 1 28 0 1852 141 69 3 chr5 160038879 160039170 -43046362 + AluJb SINE Alu 1 310 -2 2466 73 0 0 chr5 160039581 160039882 -43045650 + AluSg SINE Alu 1 301 -9 1006 268 93 10 chr5 160041023 160041586 -43043946 + Tigger8 DNA MER2_type 1 663 -3 225 0 0 0 chr5 160041997 160042022 -43043510 + (TGGGGG)n Simple_repeat Simple_repeat 2 26 0 925 181 32 5 chr5 160043757 160043945 -43041587 - AluJb SINE Alu 0 312 120 2507 67 0 0 chr5 160044305 160044602 -43040930 - AluY SINE Alu -14 297 1 25 0 0 0 chr5 160044815 160044840 -43040692 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr5 160045046 160045068 -43040464 + (A)n Simple_repeat Simple_repeat 1 22 0 29 0 0 0 chr5 160045445 160045474 -43040058 + AT_rich Low_complexity Low_complexity 1 29 0 2526 84 0 0 chr5 160045726 160046034 -43039498 - AluSx SINE Alu -4 308 1 616 153 81 0 chr5 160046540 160046651 -43038881 + LTR24C LTR ERV1 516 635 0 327 283 40 30 chr5 160046798 160047084 -43038448 + L1MEc LINE L1 1342 1488 -4935 198 305 34 0 chr5 160048358 160048417 -43037115 + MIR SINE MIR 196 256 -6 207 0 0 0 chr5 160050284 160050307 -43035225 + (CAA)n Simple_repeat Simple_repeat 2 24 0 240 35 0 0 chr5 160050468 160050497 -43035035 + (TTA)n Simple_repeat Simple_repeat 1 29 0 403 136 17 0 chr5 160050499 160050558 -43034974 - AluJ/FRAM SINE Alu -31 281 222 21 0 0 0 chr5 160053194 160053215 -43032317 + AT_rich Low_complexity Low_complexity 1 21 0 2216 87 24 0 chr5 160053215 160053503 -43032029 - AluSg SINE Alu -15 295 1 189 250 103 15 chr5 160054323 160054391 -43031141 + MIR SINE MIR 79 152 -110 1034 143 29 2 chr5 160055336 160056237 -43029295 + ALR/Alpha Satellite centromeric 1 924 -3 13001 63 3 4 chr5 160056237 160057897 -43027635 - L1PA3 LINE L1 -1175 4971 3313 7361 59 5 0 chr5 160057897 160059051 -43026481 + L1PA3 LINE L1 4998 6155 0 1238 150 1 2 chr5 160059084 160062461 -43023071 + ALR/Alpha Satellite centromeric 1 3376 -64 30934 64 3 5 chr5 160062466 160066436 -43019096 + L1P LINE L1 442 4406 -1740 1297 20 0 0 chr5 160066432 160066584 -43018948 - L1P LINE L1 -3042 3104 2953 * 9026 60 5 0 chr5 160066584 160068438 -43017094 + L1PA3 LINE L1 4297 6154 -1 1250 163 5 3 chr5 160068442 160078157 -43007375 - ALR/Alpha Satellite centromeric -1 9725 1 1159 168 4 3 chr5 160078240 160084599 -43000933 - ALR/Alpha Satellite centromeric -2 6368 1 13013 73 2 0 chr5 160084599 160086304 -42999228 - L1P LINE L1 -3586 2560 852 1132 170 4 2 chr5 160086318 160094171 -42991361 - ALR/Alpha Satellite centromeric 0 7871 1 2235 89 0 7 chr5 160094275 160094567 -42990965 + AluSg SINE Alu 13 302 -8 294 143 0 0 chr5 160095010 160095059 -42990473 + (GGA)n Simple_repeat Simple_repeat 2 50 0 189 310 0 58 chr5 160095227 160095314 -42990218 - L2 LINE L2 -2 3311 3230 * 223 325 58 64 chr5 160095312 160095500 -42990032 - MIR SINE MIR -3 259 73 373 335 96 14 chr5 160096204 160096423 -42989109 + L1MC4a LINE L1 5671 5906 -215 565 128 0 0 chr5 160096954 160097032 -42988500 + AluS SINE Alu 2 79 -233 1866 105 0 0 chr5 160097074 160097313 -42988219 - AluSc SINE Alu -70 239 1 1185 210 56 10 chr5 160097930 160098235 -42987297 + L1MA4 LINE L1 5981 6299 -1 307 217 308 17 chr5 160098253 160098302 -42987230 + HAL1 LINE L1 1578 1612 -895 1739 111 0 8 chr5 160098302 160098537 -42986995 + AluSx SINE Alu 1 233 -79 307 217 308 17 chr5 160098537 160098607 -42986925 + HAL1 LINE L1 1612 1732 -775 2243 96 3 26 chr5 160098735 160099038 -42986494 + AluSp SINE Alu 1 296 -17 369 75 0 0 chr5 160099615 160099668 -42985864 + (TG)n Simple_repeat Simple_repeat 2 54 0 6061 133 44 38 chr5 160100187 160100639 -42984893 + L1MA5 LINE L1 4903 5351 -949 1719 141 34 11 chr5 160100639 160100908 -42984624 + AluSx SINE Alu 13 287 -25 2046 121 6 19 chr5 160100908 160101221 -42984311 + AluSc SINE Alu 1 309 0 6061 133 44 38 chr5 160101221 160101271 -42984261 + L1MA5 LINE L1 5351 5399 -901 1996 122 3 33 chr5 160101271 160101574 -42983958 + AluSx SINE Alu 1 294 -18 6061 133 44 38 chr5 160101574 160101878 -42983654 + L1MA5 LINE L1 5399 5700 -600 2359 78 0 0 chr5 160101878 160102172 -42983360 + AluY SINE Alu 1 294 -17 6061 133 44 38 chr5 160102172 160102502 -42983030 + L1MA5 LINE L1 5700 6046 -254 2242 129 0 0 chr5 160102502 160102804 -42982728 + AluSx SINE Alu 1 302 -10 6061 133 44 38 chr5 160102804 160103061 -42982471 + L1MA5 LINE L1 6046 6300 0 2497 66 0 0 chr5 160103641 160103942 -42981590 - AluY SINE Alu -10 301 1 441 186 0 31 chr5 160104176 160104273 -42981259 - MIR SINE MIR -23 239 146 234 146 55 30 chr5 160104275 160104440 -42981092 + (TTATA)n Simple_repeat Simple_repeat 1 169 0 298 199 34 34 chr5 160104505 160104681 -42980851 + (TATAA)n Simple_repeat Simple_repeat 3 178 0 * 330 188 53 29 chr5 160104572 160104742 -42980790 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 182 197 53 0 chr5 160104762 160104894 -42980638 + (TTATA)n Simple_repeat Simple_repeat 5 143 0 255 223 66 18 chr5 160104914 160105080 -42980452 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 189 115 98 0 chr5 160105114 160105175 -42980357 + (TATAA)n Simple_repeat Simple_repeat 3 69 0 252 0 0 0 chr5 160105175 160105203 -42980329 + (TC)n Simple_repeat Simple_repeat 2 29 0 234 0 0 0 chr5 160105202 160105228 -42980304 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2011 113 35 0 chr5 160105229 160105511 -42980021 - AluSx SINE Alu -20 292 1 207 157 71 0 chr5 160105516 160105586 -42979946 + (TA)n Simple_repeat Simple_repeat 1 75 0 228 188 17 45 chr5 160105590 160105656 -42979876 - MIR SINE MIR -63 145 104 23 0 0 0 chr5 160106384 160106407 -42979125 + AT_rich Low_complexity Low_complexity 1 23 0 396 0 0 0 chr5 160106601 160106645 -42978887 + (TG)n Simple_repeat Simple_repeat 2 45 0 547 274 10 35 chr5 160107318 160107515 -42978017 + MIR SINE MIR 70 261 -1 2209 90 0 56 chr5 160107544 160107865 -42977667 - AluSx SINE Alu -9 303 1 2126 68 7 14 chr5 160107877 160108186 -42977346 - AluSc SINE Alu 0 307 1 2459 67 3 0 chr5 160108238 160108537 -42976995 - AluSp SINE Alu -13 300 1 627 283 17 11 chr5 160108543 160108720 -42976812 - MER5B DNA MER1_type 0 178 1 191 265 186 20 chr5 160108721 160108823 -42976709 - MIR3 SINE MIR -48 160 42 353 267 60 26 chr5 160109091 160109207 -42976325 + L2 LINE L2 3193 3312 -1 216 0 0 0 chr5 160109230 160109254 -42976278 + (T)n Simple_repeat Simple_repeat 1 24 0 311 292 58 19 chr5 160110746 160110900 -42974632 - MIR SINE MIR -37 225 66 284 275 12 0 chr5 160111347 160111427 -42974105 - MIR SINE MIR -2 260 180 249 237 102 85 chr5 160111856 160112033 -42973499 + MIR3 SINE MIR 3 182 -26 355 250 109 33 chr5 160112074 160112166 -42973366 - L2 LINE L2 -16 3297 3199 231 204 0 0 chr5 160112193 160112247 -42973285 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 1778 115 2 154 chr5 160112247 160112657 -42972875 + MER7A DNA MER2_type 1 346 0 183 250 108 50 chr5 160112668 160112788 -42972744 - L2 LINE L2 -157 3156 3030 381 272 203 0 chr5 160112885 160113050 -42972482 - MIR SINE MIR -21 241 45 464 164 60 69 chr5 160114083 160114199 -42971333 - L2 LINE L2 -16 3297 3183 2142 125 0 3 chr5 160114261 160114564 -42970968 + AluSx SINE Alu 1 302 -10 282 287 26 68 chr5 160114614 160114759 -42970773 + MIR SINE MIR 16 154 -63 465 122 0 0 chr5 160114779 160114853 -42970679 + (TA)n Simple_repeat Simple_repeat 1 74 0 1969 102 17 7 chr5 160114854 160115147 -42970385 - AluSx SINE Alu -16 296 1 296 280 68 34 chr5 160115609 160115727 -42969805 + L2 LINE L2 3177 3298 -15 205 279 126 98 chr5 160115944 160116292 -42969240 - L2 LINE L2 -35 3278 2921 1226 245 159 5 chr5 160116697 160117068 -42968464 - MLT1J2 LTR MaLR 0 450 23 2493 68 0 0 chr5 160117266 160117560 -42967972 - AluY SINE Alu -17 294 1 1991 131 3 7 chr5 160117572 160117869 -42967663 - AluSx SINE Alu -11 301 6 570 304 38 6 chr5 160118626 160118784 -42966748 - MIR SINE MIR -79 183 21 1211 275 23 6 chr5 160118797 160119146 -42966386 + L2 LINE L2 2337 2691 -623 635 267 67 50 chr5 160119147 160119447 -42966085 - MLT1J LTR MaLR -112 399 95 423 312 84 16 chr5 160119486 160119736 -42965796 - L2 LINE L2 -652 2662 2396 201 247 129 12 chr5 160120493 160120578 -42964954 - MIR SINE MIR -116 146 52 219 302 28 78 chr5 160120708 160120887 -42964645 + MIR SINE MIR 46 215 -47 180 364 0 26 chr5 160122062 160122139 -42963393 - L2 LINE L2 0 3313 3239 662 241 145 14 chr5 160122156 160122363 -42963169 + MIR SINE MIR 15 248 -14 578 283 40 26 chr5 160122408 160122634 -42962898 - L2 LINE L2 -12 3301 3073 305 268 89 57 chr5 160122648 160122805 -42962727 + L2 LINE L2 2916 3077 -236 280 0 0 0 chr5 160122902 160122933 -42962599 + (TTTA)n Simple_repeat Simple_repeat 1 136 0 2193 106 0 0 chr5 160122933 160123215 -42962317 - AluSx SINE Alu -1 312 1 313 294 24 0 chr5 160123312 160123397 -42962135 + MIR SINE MIR 20 106 -156 576 348 108 14 chr5 160125578 160126155 -42959377 + L2 LINE L2 1636 2266 -1048 790 328 55 3 chr5 160126158 160126469 -42959063 - MER102b DNA MER1_type 0 341 15 291 312 119 61 chr5 160126490 160126817 -42958715 + L2 LINE L2 2286 2631 -683 817 278 52 81 chr5 160126869 160127016 -42958516 + MLT1L LTR MaLR 150 300 -315 2115 129 3 0 chr5 160127016 160127325 -42958207 + AluSq SINE Alu 1 310 -3 817 278 52 81 chr5 160127325 160127656 -42957876 + MLT1L LTR MaLR 300 614 -1 407 262 19 0 chr5 160127940 160128043 -42957489 - L2 LINE L2 -1 3312 3208 1200 106 181 0 chr5 160128179 160128378 -42957154 - MER46A DNA MER2_type -1 235 1 1838 138 3 14 chr5 160128405 160128732 -42956800 - AluSx SINE Alu 0 312 1 365 252 90 86 chr5 160128738 160128867 -42956665 - L1MC4 LINE L1 -1 8041 7909 378 0 0 0 chr5 160128867 160128909 -42956623 + (CA)n Simple_repeat Simple_repeat 1 42 0 365 252 90 86 chr5 160128909 160129013 -42956519 - L1MC4 LINE L1 -133 7909 7807 2597 42 0 0 chr5 160129014 160129324 -42956208 + AluY SINE Alu 1 310 -1 511 140 9 75 chr5 160129335 160129442 -42956090 + FAM SINE Alu 40 139 -46 236 214 51 60 chr5 160129442 160129559 -42955973 - L1MC4 LINE L1 -218 7824 7709 337 275 0 0 chr5 160129761 160129841 -42955691 + L2 LINE L2 3191 3270 -2 233 267 89 84 chr5 160130712 160130903 -42954629 - L2 LINE L2 -53 3219 3028 21 0 0 0 chr5 160133135 160133156 -42952376 + AT_rich Low_complexity Low_complexity 1 21 0 1910 96 4 4 chr5 160133553 160133814 -42951718 - AluSx SINE Alu -49 263 3 1544 176 85 0 chr5 160134381 160134653 -42950879 - AluJb SINE Alu -7 295 1 1984 108 10 41 chr5 160135015 160135329 -42950203 - AluSx SINE Alu -8 304 1 391 177 0 0 chr5 160136532 160136594 -42948938 - MER20 DNA MER1_type 0 219 158 210 233 0 0 chr5 160136594 160136654 -42948878 + (TGG)n Simple_repeat Simple_repeat 1 60 0 526 226 6 94 chr5 160136668 160136827 -42948705 - MER20 DNA MER1_type -69 150 6 572 173 18 0 chr5 160136920 160137030 -42948502 - AluJo/FRAM SINE Alu 0 312 201 * 783 106 0 0 chr5 160137027 160137131 -42948401 - AluSq/x SINE Alu -207 105 2 196 195 49 0 chr5 160137652 160137693 -42947839 - L2 LINE L2 -34 3279 3237 2050 111 0 0 chr5 160137824 160138104 -42947428 - AluSx SINE Alu -32 280 1 237 211 18 0 chr5 160138130 160138187 -42947345 - L2 LINE L2 -238 3034 2977 602 320 139 20 chr5 160138231 160138525 -42947007 - L2 LINE L2 -339 2975 2647 917 233 15 66 chr5 160138681 160138821 -42946711 - MLT1C LTR MaLR -152 315 194 2203 99 3 10 chr5 160138821 160139135 -42946397 - AluSx SINE Alu 0 312 1 917 233 15 66 chr5 160139135 160139265 -42946267 - MLT1C LTR MaLR -273 194 59 450 258 109 16 chr5 160139402 160139530 -42946002 + MER102b DNA MER1_type 200 339 -2 308 103 17 52 chr5 160140764 160140822 -42944710 + L2 LINE L2 3258 3313 0 601 271 24 35 chr5 160141177 160141341 -42944191 - L1MC4a LINE L1 -248 5916 5785 1231 148 88 0 chr5 160141341 160141558 -42943974 - MER46A DNA MER2_type 0 236 1 601 271 24 35 chr5 160141558 160141687 -42943845 - L1MC4a LINE L1 -379 5785 5656 1339 163 69 97 chr5 160141964 160142314 -42943218 + MLT1A1 LTR MaLR 1 340 -25 952 71 14 0 chr5 160142879 160143020 -42942512 + Alu SINE Alu 169 311 0 558 280 96 46 chr5 160143024 160143196 -42942336 + MIR SINE MIR 12 201 -61 1452 137 13 4 chr5 160143196 160143429 -42942103 + AluJo SINE Alu 61 295 -17 558 280 96 46 chr5 160143429 160143495 -42942037 + MIR SINE MIR 201 262 0 1827 166 0 0 chr5 160143612 160143914 -42941618 - AluJb SINE Alu -7 305 4 2213 89 0 0 chr5 160144543 160144835 -42940697 - AluSg SINE Alu -18 292 1 511 235 164 16 chr5 160145215 160145398 -42940134 - MIR SINE MIR -19 243 34 915 235 30 30 chr5 160145741 160145975 -42939557 + MIR SINE MIR 13 246 -16 650 223 117 44 chr5 160145985 160146077 -42939455 + Charlie8 DNA MER1_type 28 112 -229 2374 75 0 0 chr5 160146077 160146382 -42939150 + AluY SINE Alu 1 305 -6 650 223 117 44 chr5 160146382 160146495 -42939037 + Charlie8 DNA MER1_type 112 248 -93 2333 88 3 0 chr5 160146507 160146812 -42938720 - AluSg SINE Alu -4 306 1 389 238 0 79 chr5 160146864 160146990 -42938542 - LTR16A1 LTR ERVL -77 380 265 407 292 43 0 chr5 160147333 160147464 -42938068 - MIR SINE MIR -67 141 20 801 220 13 0 chr5 160148187 160148337 -42937195 - AluJo/FRAM SINE Alu -27 285 134 1493 113 9 4 chr5 160148337 160148567 -42936965 - AluSg/x SINE Alu -10 302 72 2130 106 7 0 chr5 160148758 160149059 -42936473 + AluSq SINE Alu 1 303 -10 261 226 21 129 chr5 160149158 160149203 -42936329 - MIR SINE MIR -117 145 113 2257 65 0 23 chr5 160149203 160149510 -42936022 + AluY SINE Alu 1 300 -11 261 226 21 129 chr5 160149510 160149557 -42935975 - MIR SINE MIR -149 113 63 1498 179 7 33 chr5 160149557 160149859 -42935673 - AluJb SINE Alu -18 294 1 607 283 86 5 chr5 160150117 160150315 -42935217 + MIR SINE MIR 28 241 -21 2752 142 42 48 chr5 160150514 160150565 -42934967 - MLT2B1 LTR ERVL 0 520 470 1958 123 32 0 chr5 160150565 160150849 -42934683 + AluSx SINE Alu 1 293 -19 2752 142 42 48 chr5 160150849 160151217 -42934315 - MLT2B1 LTR ERVL -50 470 102 2055 125 0 0 chr5 160151217 160151513 -42934019 + AluJb SINE Alu 10 305 -7 2752 142 42 48 chr5 160151513 160151614 -42933918 - MLT2B1 LTR ERVL -418 102 2 296 276 31 10 chr5 160151886 160151984 -42933548 + MIR SINE MIR 157 256 -6 357 39 0 0 chr5 160152010 160152061 -42933471 - AluY SINE Alu 0 302 252 2239 59 24 0 chr5 160152077 160152365 -42933167 + AluY SINE Alu 1 295 -16 1803 149 17 0 chr5 160152468 160152756 -42932776 + AluSx SINE Alu 1 293 -19 637 172 0 17 chr5 160152756 160152865 -42932667 - FLAM_C SINE Alu -174 138 30 1778 196 27 32 chr5 160152870 160153261 -42932271 - MER69B DNA AcHobo -1443 1083 693 2424 63 0 0 chr5 160153261 160153561 -42931971 + AluY SINE Alu 1 300 -11 1778 196 27 32 chr5 160153561 160153609 -42931923 - MER69B DNA AcHobo -1833 693 646 585 172 0 0 chr5 160153638 160153731 -42931801 - AluS SINE Alu -219 94 2 1585 264 136 14 chr5 160153737 160154317 -42931215 - MER69B DNA AcHobo -569 657 7 288 241 69 35 chr5 160154454 160154541 -42930991 + L2 LINE L2 3173 3262 -51 198 271 0 57 chr5 160154585 160154655 -42930877 - MIR SINE MIR -114 148 83 21 0 0 0 chr5 160155676 160155697 -42929835 + AT_rich Low_complexity Low_complexity 1 21 0 657 268 93 30 chr5 160155868 160156197 -42929335 + L1MC4a LINE L1 5478 5639 -663 2201 70 20 0 chr5 160156200 160156498 -42929034 + AluY SINE Alu 1 304 -7 606 232 104 100 chr5 160156508 160156758 -42928774 - MIR SINE MIR 0 262 12 810 123 57 0 chr5 160156996 160157118 -42928414 + FLAM_C SINE Alu 1 129 -4 2140 68 0 7 chr5 160157123 160157401 -42928131 + AluY SINE Alu 1 276 -35 1321 192 4 4 chr5 160157446 160157696 -42927836 - AluJb SINE Alu -62 250 1 1972 116 24 0 chr5 160157699 160157993 -42927539 - AluSx SINE Alu -11 301 1 283 335 47 47 chr5 160158697 160158888 -42926644 - MIR SINE MIR -25 237 47 347 287 86 61 chr5 160158935 160159214 -42926318 - L1ME4a LINE L1 -38 6083 5798 611 260 12 12 chr5 160159234 160159403 -42926129 - L1ME4a LINE L1 -470 5651 5483 2049 112 7 3 chr5 160159419 160159723 -42925809 + AluY SINE Alu 1 305 -6 1893 152 0 7 chr5 160159723 160160032 -42925500 + AluJb SINE Alu 1 307 -5 2063 107 7 10 chr5 160160119 160160429 -42925103 - AluSg SINE Alu -1 309 1 24 0 0 0 chr5 160160460 160160484 -42925048 + AT_rich Low_complexity Low_complexity 1 24 0 2526 37 0 0 chr5 160160533 160160829 -42924703 - AluY SINE Alu -15 296 1 423 87 29 14 chr5 160160848 160160917 -42924615 - L1MC4 LINE L1 -2 8040 7971 2179 101 0 3 chr5 160160928 160161234 -42924298 - AluSc SINE Alu -2 307 3 2291 63 3 0 chr5 160161249 160161536 -42923996 - AluY SINE Alu -23 288 1 25 31 0 0 chr5 160161538 160161570 -42923962 + AT_rich Low_complexity Low_complexity 1 32 0 312 313 53 40 chr5 160161635 160161785 -42923747 + MER5A DNA MER1_type 38 189 0 2106 99 7 0 chr5 160162562 160162855 -42922677 + AluSx SINE Alu 11 305 -7 2296 61 0 10 chr5 160162855 160163150 -42922382 + AluY SINE Alu 1 292 -19 27 29 0 0 chr5 160163155 160163189 -42922343 + AT_rich Low_complexity Low_complexity 1 34 0 2033 109 3 3 chr5 160163189 160163483 -42922049 + AluSx SINE Alu 1 294 -18 225 0 0 0 chr5 160163490 160163515 -42922017 + (CA)n Simple_repeat Simple_repeat 2 26 0 194 164 18 0 chr5 160163541 160163596 -42921936 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 601 297 10 25 chr5 160163721 160163923 -42921609 + MIR SINE MIR 16 214 -48 546 277 60 18 chr5 160163947 160164229 -42921303 - L1ME4a LINE L1 -118 6003 5710 1966 119 0 26 chr5 160164239 160164541 -42920991 + AluSx SINE Alu 1 294 -18 326 288 22 22 chr5 160164618 160164757 -42920775 - L1ME4a LINE L1 -463 5658 5520 418 295 183 7 chr5 160165062 160165182 -42920350 + MIR SINE MIR 1 143 -65 2249 99 3 3 chr5 160165382 160165695 -42919837 + AluSp SINE Alu 1 313 0 418 157 14 0 chr5 160165811 160165881 -42919651 + MER81 DNA DNA 43 113 -1 197 321 25 25 chr5 160167232 160167313 -42918219 - L2 LINE L2 -209 3063 2983 * 515 260 52 64 chr5 160167310 160167358 -42918174 - L2 LINE L2 -4 3309 3262 1989 120 10 7 chr5 160167358 160167657 -42917875 - AluSg SINE Alu -10 300 1 515 260 52 64 chr5 160167657 160167781 -42917751 - L2 LINE L2 -51 3262 3139 1536 161 183 35 chr5 160167781 160167848 -42917684 - MER31B LTR ERV1 0 466 410 2082 105 13 13 chr5 160167848 160168152 -42917380 - AluSx SINE Alu -8 304 1 1536 161 183 35 chr5 160168152 160168488 -42917044 - MER31B LTR ERV1 -56 410 3 858 206 0 6 chr5 160168552 160168712 -42916820 - FRAM SINE Alu -7 159 1 21 36 0 0 chr5 160168724 160168752 -42916780 + AT_rich Low_complexity Low_complexity 1 28 0 1809 112 0 0 chr5 160168769 160169018 -42916514 - AluSq SINE Alu -64 249 1 448 269 121 13 chr5 160169054 160169271 -42916261 - L2 LINE L2 -288 3025 2794 781 147 0 31 chr5 160171382 160171511 -42914021 - AluJb SINE Alu -52 260 136 868 62 11 62 chr5 160171513 160171690 -42913842 + (TTCC)n Simple_repeat Simple_repeat 1 168 0 1365 137 65 28 chr5 160171699 160171947 -42913585 - AluSx SINE Alu -55 257 1 783 153 7 60 chr5 160171954 160172104 -42913428 - FLAM_C SINE Alu 0 143 2 2116 123 3 0 chr5 160172136 160172437 -42913095 + AluSq SINE Alu 1 302 -11 349 321 95 58 chr5 160172793 160173067 -42912465 - L2 LINE L2 0 3272 2989 1573 94 0 5 chr5 160173385 160173620 -42911912 - AluSc SINE Alu 0 304 71 * 2118 89 3 58 chr5 160173618 160173945 -42911587 - AluSp SINE Alu -4 309 1 431 86 0 0 chr5 160173955 160174013 -42911519 - tRNA-Asp-GAC tRNA tRNA 0 75 18 592 173 0 29 chr5 160174013 160174117 -42911415 - AluSc SINE Alu -207 102 2 375 187 154 51 chr5 160174131 160174345 -42911187 - Zaphod DNA AcHobo -3150 881 646 1081 173 35 0 chr5 160174350 160174547 -42910985 + AluJb SINE Alu 6 209 -103 21 0 0 0 chr5 160174597 160174618 -42910914 + AT_rich Low_complexity Low_complexity 1 21 0 2218 216 78 32 chr5 160174677 160175232 -42910300 - Zaphod DNA AcHobo -3450 581 2 474 256 320 5 chr5 160175236 160175439 -42910093 - MLT1L LTR MaLR -348 267 1 383 289 133 0 chr5 160175439 160175574 -42909958 - MIR SINE MIR -109 153 1 243 316 76 29 chr5 160175585 160175756 -42909776 - L2 LINE L2 -267 3005 2827 2144 116 33 38 chr5 160176035 160176565 -42908967 - MER51A LTR ERV1 -16 618 1 411 277 254 16 chr5 160176615 160176922 -42908610 - L2 LINE L2 -954 2360 1981 720 233 0 7 chr5 160177433 160177579 -42907953 + MER45A DNA AcHobo 1 145 -33 414 134 160 101 chr5 160177579 160177640 -42907892 - MER53 DNA DNA -63 126 70 2131 102 0 3 chr5 160177640 160177935 -42907597 + AluSq SINE Alu 1 294 -19 414 134 160 101 chr5 160177935 160177992 -42907540 - MER53 DNA DNA -119 70 1 551 274 258 3 chr5 160178296 160178610 -42906922 + L2 LINE L2 2851 3244 -69 2016 107 10 0 chr5 160178639 160178929 -42906603 + AluSx SINE Alu 1 293 -19 884 151 78 12 chr5 160178929 160179095 -42906437 + AluJo/FRAM SINE Alu 134 310 -2 334 275 145 38 chr5 160179390 160179682 -42905850 + MLT1K LTR MaLR 209 588 0 890 161 0 34 chr5 160179683 160179832 -42905700 - FAM SINE Alu -41 144 1 2446 44 3 0 chr5 160180481 160180778 -42904754 + AluY SINE Alu 1 298 -13 1792 138 20 16 chr5 160181025 160181330 -42904202 + AluJb SINE Alu 1 306 -6 326 296 163 43 chr5 160181467 160181867 -42903665 - L1ME4a LINE L1 -215 5906 5419 1788 142 17 0 chr5 160181867 160182162 -42903370 - AluJo SINE Alu -12 300 1 326 296 163 43 chr5 160182162 160182318 -42903214 - L1ME4a LINE L1 -702 5419 5283 585 42 0 0 chr5 160182521 160182593 -42902939 + (TTCC)n Simple_repeat Simple_repeat 2 73 0 726 182 12 6 chr5 160182594 160182764 -42902768 + CT-rich Low_complexity Low_complexity 2 172 0 2173 110 7 0 chr5 160182764 160183074 -42902458 - AluSx SINE Alu 0 312 1 2221 148 53 26 chr5 160184091 160184545 -42900987 - MER31B LTR ERV1 0 466 1 838 174 64 12 chr5 160184545 160184717 -42900815 - MER31B-int LTR ERV1 -20 4916 4736 297 145 97 48 chr5 160184715 160184777 -42900755 - MER31B-int LTR ERV1 -388 4548 4484 * 368 168 126 32 chr5 160184988 160185083 -42900449 - LTR37A LTR ERV1 -310 116 13 186 315 148 9 chr5 160185135 160185243 -42900289 + MIR SINE MIR 33 155 -107 * 590 225 65 7 chr5 160185235 160185373 -42900159 - MIR SINE MIR 0 262 117 382 293 152 0 chr5 160185820 160185984 -42899548 - MIR SINE MIR -70 192 4 729 278 68 4 chr5 160186052 160186286 -42899246 + MIR SINE MIR 8 256 -6 210 279 59 29 chr5 160186797 160186865 -42898667 + MIR SINE MIR 174 243 -19 325 342 159 17 chr5 160186896 160187159 -42898373 - L2 LINE L2 -43 3270 3046 2091 97 7 0 chr5 160187159 160187438 -42898094 + AluSx SINE Alu 1 281 -31 325 342 159 17 chr5 160187438 160187583 -42897949 - L2 LINE L2 -267 3046 2804 280 191 132 0 chr5 160187718 160187786 -42897746 + L2 LINE L2 3147 3223 -49 471 307 98 19 chr5 160187967 160188182 -42897350 - MIR SINE MIR -14 248 17 2073 115 0 3 chr5 160189594 160189890 -42895642 - AluSg SINE Alu -14 296 2 228 276 117 35 chr5 160189913 160190058 -42895474 - L1ME4a LINE L1 -26 6095 5939 932 210 127 4 chr5 160190070 160190299 -42895233 - MIR SINE MIR -3 259 3 309 331 24 24 chr5 160190302 160190426 -42895106 - L1ME4a LINE L1 -190 5931 5808 192 329 106 0 chr5 160190513 160190598 -42894934 - MIR SINE MIR 0 262 169 652 153 83 0 chr5 160190742 160190886 -42894646 - L1MD2 LINE L1 -2 6357 6202 2155 100 0 10 chr5 160190925 160191226 -42894306 - AluSq SINE Alu -15 298 1 387 318 60 13 chr5 160191350 160191501 -42894031 - MIR SINE MIR -97 165 8 1543 284 82 15 chr5 160192980 160193165 -42892367 + L2 LINE L2 2508 2679 -634 1607 171 16 13 chr5 160193165 160193469 -42892063 + AluJo SINE Alu 1 305 -7 1543 284 82 15 chr5 160193469 160194031 -42891501 + L2 LINE L2 2679 3311 -2 1751 224 35 18 chr5 160194069 160194559 -42890973 - L1M4 LINE L1 -1596 4550 4053 204 40 0 0 chr5 160194592 160194617 -42890915 + (TG)n Simple_repeat Simple_repeat 2 26 0 478 152 0 22 chr5 160194652 160194744 -42890788 - L1M4 LINE L1 -1062 5084 4995 609 261 113 10 chr5 160194744 160194939 -42890593 + MER20B DNA MER1_type 30 244 -539 522 166 90 0 chr5 160195055 160195200 -42890332 + MER20B DNA MER1_type 532 689 -94 2353 57 7 3 chr5 160195531 160195827 -42889705 + AluY SINE Alu 1 297 -14 38 0 0 0 chr5 160195844 160195882 -42889650 + AT_rich Low_complexity Low_complexity 1 38 0 399 146 42 0 chr5 160195882 160196026 -42889506 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 22 0 0 0 chr5 160196026 160196048 -42889484 + AT_rich Low_complexity Low_complexity 1 22 0 817 191 0 20 chr5 160196049 160196201 -42889331 + AluJb SINE Alu 158 306 -6 534 221 50 0 chr5 160196309 160196434 -42889098 + L1ME LINE L1 5651 5789 -373 2049 115 10 0 chr5 160196496 160196800 -42888732 - AluSp SINE Alu -6 307 1 1985 147 0 0 chr5 160196807 160197119 -42888413 - AluSx SINE Alu 0 312 1 2007 113 14 7 chr5 160197130 160197423 -42888109 - AluSq SINE Alu -18 295 1 4357 161 11 26 chr5 160197423 160198234 -42887298 - L1MB1 LINE L1 -46 6122 5324 332 109 0 0 chr5 160198238 160198293 -42887239 - FLAM_A SINE Alu 0 133 79 746 281 25 25 chr5 160198299 160198502 -42887030 - MIR SINE MIR -58 204 2 416 259 45 75 chr5 160198506 160198532 -42887000 + Charlie8 DNA MER1_type 86 111 -2306 2084 121 0 3 chr5 160198532 160198839 -42886693 + AluSq SINE Alu 1 306 -7 416 259 45 75 chr5 160198839 160199013 -42886519 + Charlie8 DNA MER1_type 111 280 -2137 2066 104 13 0 chr5 160199337 160199636 -42885896 + AluSx SINE Alu 1 303 -9 24 53 0 0 chr5 160199891 160199929 -42885603 + AT_rich Low_complexity Low_complexity 1 38 0 742 268 67 25 chr5 160201309 160201548 -42883984 + MIR SINE MIR 14 262 0 1076 178 40 43 chr5 160201560 160201813 -42883719 + AluJo SINE Alu 49 300 -12 420 230 0 0 chr5 160202188 160202262 -42883270 - MER5A DNA MER1_type -107 82 9 539 331 59 40 chr5 160202265 160202537 -42882995 - L3 LINE CR1 -18 1559 1283 2237 86 0 13 chr5 160202828 160203130 -42882402 - AluSg SINE Alu -12 298 1 249 355 128 14 chr5 160203164 160203375 -42882157 - L3 LINE CR1 -394 1183 949 1495 178 6 50 chr5 160203532 160203853 -42881679 - AluJo SINE Alu -5 307 1 394 243 268 47 chr5 160203944 160204220 -42881312 - L3 LINE CR1 -666 911 575 417 183 226 0 chr5 160204326 160204419 -42881113 - FLAM_A SINE Alu -27 115 2 954 177 17 11 chr5 160204481 160204656 -42880876 + L1PB4 LINE L1 5976 6151 -5 283 337 11 0 chr5 160204671 160204766 -42880766 - MER103 DNA DNA 0 166 71 247 369 48 10 chr5 160204882 160204985 -42880547 - L3 LINE CR1 -1034 543 437 568 330 71 6 chr5 160205226 160205472 -42880060 - MIR SINE MIR 0 262 5 275 274 255 0 chr5 160207160 160207262 -42878270 - L2 LINE L2 -5 3267 3140 184 327 35 18 chr5 160207897 160208010 -42877522 - MIR SINE MIR -111 151 37 370 270 11 0 chr5 160208745 160208834 -42876698 - L2 LINE L2 -196 3076 2987 205 301 10 87 chr5 160209264 160209325 -42876207 + MIR SINE MIR 18 69 -139 1571 157 3 70 chr5 160209325 160209485 -42876047 - AluJo SINE Alu -18 294 164 2129 107 3 3 chr5 160209485 160209793 -42875739 - AluSx SINE Alu -4 308 1 1571 157 3 70 chr5 160209793 160209945 -42875587 - AluJo SINE Alu -148 164 3 205 301 10 87 chr5 160209945 160209986 -42875546 + MIR SINE MIR 69 112 -96 180 0 0 0 chr5 160210031 160210051 -42875481 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1638 124 7 18 chr5 160210054 160210328 -42875204 - AluSq SINE Alu -36 277 7 25 31 0 0 chr5 160210328 160210360 -42875172 + AT_rich Low_complexity Low_complexity 1 32 0 848 201 152 69 chr5 160210430 160210793 -42874739 - L1MC4 LINE L1 -125 7917 7525 636 271 97 64 chr5 160210799 160211031 -42874501 - L2 LINE L2 -5 3308 3085 2127 98 3 0 chr5 160211031 160211316 -42874216 + AluSc SINE Alu 1 286 -23 636 271 97 64 chr5 160211316 160211702 -42873830 - L2 LINE L2 -228 3085 2674 481 283 159 46 chr5 160212734 160213080 -42872452 + L2 LINE L2 2875 3259 -54 714 240 14 0 chr5 160214043 160214189 -42871343 - Charlie8 DNA MER1_type -2152 265 118 898 156 0 0 chr5 160214203 160214338 -42871194 - AluJo SINE Alu -177 135 1 237 231 62 0 chr5 160214338 160214403 -42871129 - Charlie8 DNA MER1_type -2286 131 63 2126 99 14 0 chr5 160214403 160214695 -42870837 + AluSx SINE Alu 1 296 -16 281 209 0 0 chr5 160214725 160214768 -42870764 + AluSg/x SINE Alu 137 179 -123 * 2110 172 63 29 chr5 160214761 160215174 -42870358 - MER66B LTR ERV1 -59 427 1 399 162 0 0 chr5 160215174 160215242 -42870290 + AluJ/FRAM SINE Alu 230 297 -5 181 355 37 9 chr5 160215480 160215587 -42869945 + MIR SINE MIR 44 153 -55 2192 93 3 3 chr5 160215679 160215989 -42869543 - AluSp SINE Alu -3 310 1 591 296 19 12 chr5 160216822 160216984 -42868548 + MIR SINE MIR 10 172 -90 299 353 29 39 chr5 160216985 160217189 -42868343 + MIR SINE MIR 61 262 0 457 247 176 11 chr5 160217523 160217705 -42867827 + L2 LINE L2 3013 3224 -89 1627 166 3 46 chr5 160217844 160218170 -42867362 + AluJo SINE Alu 1 312 0 431 366 54 0 chr5 160218462 160218648 -42866884 - MIR SINE MIR -44 218 23 590 328 62 12 chr5 160219172 160219416 -42866116 - MIR SINE MIR -1 261 6 2121 132 0 0 chr5 160219440 160219744 -42865788 - AluSx SINE Alu -8 304 1 470 310 18 0 chr5 160220086 160220199 -42865333 + L2 LINE L2 3191 3305 -8 545 271 115 49 chr5 160220285 160220632 -42864900 + L2 LINE L2 2944 3313 0 2255 92 0 7 chr5 160221964 160222267 -42863265 - AluSx SINE Alu -11 301 1 257 151 170 0 chr5 160222412 160222465 -42863067 + L2 LINE L2 3211 3272 0 1562 83 13 22 chr5 160222688 160222918 -42862614 + L1MA2 LINE L1 6073 6300 -4 413 213 19 65 chr5 160222928 160223083 -42862449 - MLT1K LTR MaLR -91 497 350 429 259 54 68 chr5 160223097 160223117 -42862415 + MIR SINE MIR 12 31 -231 2480 61 0 3 chr5 160223117 160223427 -42862105 + AluY SINE Alu 1 309 -2 429 259 54 68 chr5 160223427 160223553 -42861979 + MIR SINE MIR 31 156 -106 1074 250 32 4 chr5 160223554 160223802 -42861730 - MIR SINE MIR -4 258 4 294 220 0 99 chr5 160223811 160223902 -42861630 + MIR SINE MIR 150 231 -31 648 348 29 11 chr5 160223928 160224201 -42861331 - MLT1K LTR MaLR -236 352 75 252 0 0 0 chr5 160224207 160224235 -42861297 + (A)n Simple_repeat Simple_repeat 1 28 0 1666 103 19 27 chr5 160224461 160224722 -42860810 - L1PA10 LINE L1 -3 6165 5907 394 103 39 77 chr5 160225384 160225462 -42860070 - MSTA LTR MaLR 0 428 354 1991 103 177 23 chr5 160225462 160225812 -42859720 - MSTA LTR MaLR -24 404 1 2257 125 6 8 chr5 160226259 160226612 -42858920 - MER41B LTR ERV1 -88 547 196 464 209 38 19 chr5 160226741 160226899 -42858633 - Charlie7 DNA MER1_type -6 2606 2446 3116 197 51 5 chr5 160226997 160227668 -42857864 - L1ME1 LINE L1 -5 6230 5529 1909 134 28 0 chr5 160227778 160228068 -42857464 - AluSx SINE Alu -14 298 1 391 161 0 32 chr5 160228089 160228182 -42857350 - L1ME1 LINE L1 -4164 2232 2143 287 209 0 0 chr5 160228193 160228260 -42857272 - L1MB8 LINE L1 0 6178 6112 1748 127 14 31 chr5 160228261 160228553 -42856979 + AluJo SINE Alu 1 287 -25 593 165 39 8 chr5 160228598 160228725 -42856807 + MER41B LTR ERV1 417 547 -88 294 93 0 0 chr5 160228960 160229003 -42856529 - MADE1 DNA Mariner -37 43 1 26 30 0 0 chr5 160229056 160229089 -42856443 + AT_rich Low_complexity Low_complexity 1 33 0 526 237 8 0 chr5 160229089 160229207 -42856325 - L1MB7 LINE L1 -56 6128 6010 3779 246 81 36 chr5 160229208 160229496 -42856036 - L1ME1 LINE L1 -4263 2133 1859 2096 102 0 0 chr5 160229496 160229781 -42855751 - AluSc SINE Alu -4 305 21 3779 246 81 36 chr5 160229781 160230932 -42854600 - L1ME1 LINE L1 -4537 1859 630 846 233 58 19 chr5 160230932 160231138 -42854394 + MER58A DNA MER1_type 3 216 -8 2011 123 3 0 chr5 160231139 160231432 -42854100 + AluSx SINE Alu 1 294 -18 931 197 14 40 chr5 160231602 160231825 -42853707 - L1ME1 LINE L1 -6137 259 43 1919 114 10 7 chr5 160231966 160232256 -42853276 - AluSx SINE Alu -21 291 1 476 243 53 53 chr5 160232525 160232562 -42852970 - MIR SINE MIR 0 262 226 2141 108 3 3 chr5 160232562 160232869 -42852663 + AluSq SINE Alu 1 307 -6 476 243 53 53 chr5 160232869 160233037 -42852495 - MIR SINE MIR -35 227 57 340 203 0 16 chr5 160233100 160233164 -42852368 - MER81 DNA DNA -41 73 11 259 327 59 0 chr5 160233209 160233310 -42852222 + MIR SINE MIR 156 262 0 821 303 161 16 chr5 160233345 160233831 -42851701 + LTR67 LTR ERVL 2 557 0 185 352 152 32 chr5 160233835 160234145 -42851387 + L2 LINE L2 2308 2654 -660 2246 96 0 6 chr5 160234328 160234640 -42850892 + AluSx SINE Alu 1 310 -2 2831 210 27 49 chr5 160234640 160234933 -42850599 - MER82 DNA MER2_type 0 653 355 881 154 11 63 chr5 160234933 160235108 -42850424 - FRAM SINE Alu 0 166 1 2831 210 27 49 chr5 160235108 160235482 -42850050 - MER82 DNA MER2_type -298 355 1 698 304 77 37 chr5 160235580 160235985 -42849547 - MLT2C2 LTR ERVL 0 464 44 * 1193 172 0 0 chr5 160235812 160235998 -42849534 - MLT1E3 LTR MaLR -387 237 52 1828 162 3 0 chr5 160236080 160236370 -42849162 + AluJb SINE Alu 1 291 -21 577 291 113 0 chr5 160236526 160236677 -42848855 - MIR SINE MIR -93 169 2 388 260 31 47 chr5 160237104 160237231 -42848301 - L2 LINE L2 0 3272 3148 2094 141 141 5 chr5 160237267 160237644 -42847888 + MSTA LTR MaLR 1 428 0 8199 184 119 15 chr5 160237823 160239413 -42846119 - MER52A LTR ERV1 0 1755 1 1483 227 67 30 chr5 160239721 160240082 -42845450 - MLT1A2 LTR MaLR 0 374 1 321 218 37 28 chr5 160241181 160241292 -42844240 + MIR SINE MIR 52 158 -68 367 0 0 0 chr5 160241292 160241332 -42844200 + THE1B LTR MaLR 1 40 -324 346 254 26 18 chr5 160241336 160241380 -42844152 + MIR SINE MIR 148 190 -72 1703 176 10 0 chr5 160241380 160241670 -42843862 + AluJo SINE Alu 1 293 -19 346 254 26 18 chr5 160241670 160241739 -42843793 + MIR SINE MIR 190 262 0 471 344 21 5 chr5 160242586 160242772 -42842760 - MER5A DNA MER1_type 0 189 1 278 219 12 37 chr5 160242790 160242872 -42842660 - LTR16C LTR ERVL -2 489 410 2407 64 0 0 chr5 160244290 160244586 -42840946 - AluY SINE Alu -15 296 1 2111 109 13 0 chr5 160244804 160245107 -42840425 + AluSx SINE Alu 1 307 -5 232 265 60 48 chr5 160245294 160245377 -42840155 + L3 LINE CR1 1491 1574 -3 232 234 0 65 chr5 160245489 160245566 -42839966 - LTR67 LTR ERVL -2 555 484 * 1002 295 118 25 chr5 160245497 160245648 -42839884 - MLT1K LTR MaLR -10 578 442 204 40 0 0 chr5 160245648 160245673 -42839859 + (TG)n Simple_repeat Simple_repeat 2 26 0 1002 295 118 25 chr5 160245673 160246036 -42839496 - MLT1K LTR MaLR -146 442 16 2982 119 125 8 chr5 160247055 160247527 -42838005 + MER1A DNA MER1_type 1 527 0 204 138 0 0 chr5 160247534 160247563 -42837969 + MIR3 SINE MIR 161 189 -19 2321 87 0 0 chr5 160247594 160247894 -42837638 - AluY SINE Alu -11 300 1 911 235 55 17 chr5 160247954 160248192 -42837340 - MIR SINE MIR -8 254 8 1463 146 101 58 chr5 160248339 160248669 -42836863 + L1MA9 LINE L1 5919 6268 -44 2316 67 3 10 chr5 160248669 160248966 -42836566 - AluSp SINE Alu -18 295 1 1463 146 101 58 chr5 160248966 160249012 -42836520 + L1MA9 LINE L1 6268 6311 -1 2389 69 0 3 chr5 160250926 160251232 -42834300 + AluY SINE Alu 1 305 -6 1811 137 0 18 chr5 160251401 160251726 -42833806 + AluSx SINE Alu 6 325 0 446 226 94 92 chr5 160251808 160252006 -42833526 + MIR SINE MIR 6 211 -51 385 246 123 12 chr5 160252201 160252372 -42833160 + MER113 DNA MER1_type? 9 198 -323 540 158 50 0 chr5 160252453 160252554 -42832978 + MER5A DNA MER1_type 7 112 -77 213 200 0 0 chr5 160252545 160252580 -42832952 - MER5A DNA MER1_type -113 76 42 * 191 281 0 53 chr5 160252638 160252695 -42832837 + MIR3 SINE MIR 131 184 -24 651 202 9 0 chr5 160252695 160252809 -42832723 + FLAM_A SINE Alu 12 126 -16 1315 136 0 14 chr5 160253143 160253363 -42832169 - AluJo SINE Alu -11 301 85 253 97 0 0 chr5 160253363 160253394 -42832138 - AluSp/q SINE Alu -53 250 220 1832 112 0 4 chr5 160253394 160253663 -42831869 - AluY SINE Alu -43 268 1 1191 62 0 0 chr5 160253663 160253807 -42831725 - AluY SINE Alu -167 144 1 289 300 25 50 chr5 160255064 160255184 -42830348 + L2 LINE L2 3182 3298 -15 182 278 166 18 chr5 160255383 160255552 -42829980 - L2 LINE L2 0 3313 3120 189 274 0 0 chr5 160255895 160255946 -42829586 + MIR SINE MIR 2 52 -210 219 333 0 0 chr5 160256521 160256599 -42828933 + MIR SINE MIR 164 241 -21 304 267 111 59 chr5 160256710 160256845 -42828687 - MIR SINE MIR -113 149 8 2151 105 3 3 chr5 160256980 160257284 -42828248 + AluSx SINE Alu 1 304 -8 445 188 168 0 chr5 160257284 160257385 -42828147 - AluJo/FLAM SINE Alu -184 118 1 993 154 11 2 chr5 160307862 160308242 -42777290 - ALR/Alpha Satellite centromeric -2 383 1 12702 73 2 0 chr5 160308242 160309947 -42775585 - L1P LINE L1 -3586 2560 852 1103 173 4 2 chr5 160309961 160319577 -42765955 - ALR/Alpha Satellite centromeric 0 9636 1 1077 170 5 2 chr5 160319588 160323962 -42761570 - ALR/Alpha Satellite centromeric 0 4388 1 1073 175 5 3 chr5 160324156 160330642 -42754890 - ALR/Alpha Satellite centromeric 0 6499 1 1177 161 4 2 chr5 160330656 160332930 -42752602 + ALR/Alpha Satellite centromeric 1 2268 -14188 8428 58 7 0 chr5 160332930 160334785 -42750747 + L1PA3 LINE L1 4292 6152 -3 1177 161 4 2 chr5 160334785 160336390 -42749142 + ALR/Alpha Satellite centromeric 2268 3868 -12588 6996 48 5 2 chr5 160336390 160338014 -42747518 - L1PA3 LINE L1 -2 6153 4523 1177 161 4 2 chr5 160338014 160347065 -42738467 + ALR/Alpha Satellite centromeric 3868 16445 -11 1220 149 88 0 chr5 160447069 160447284 -42638248 - MER46A DNA MER2_type -2 234 1 400 270 9 24 chr5 160447285 160447416 -42638116 - L1P4 LINE L1 -383 5782 5652 1376 169 63 100 chr5 160447690 160448069 -42637463 + MLT1A1 LTR MaLR 1 365 0 2496 80 0 10 chr5 160448645 160448957 -42636575 + AluSc SINE Alu 1 309 0 347 301 119 0 chr5 160449482 160449675 -42635857 + MIR SINE MIR 29 244 -18 2383 151 47 19 chr5 160449757 160450276 -42635256 + MLT2A2 LTR ERVL 1 554 0 2221 128 0 0 chr5 160450398 160450703 -42634829 - AluSx SINE Alu -7 305 1 2387 78 3 0 chr5 160450996 160451289 -42634243 + AluSp SINE Alu 1 294 -19 259 321 127 24 chr5 160453241 160453406 -42632126 - MER5A DNA MER1_type -1 188 7 257 245 0 51 chr5 160454881 160454979 -42630553 + T-rich Low_complexity Low_complexity 2 94 0 412 213 74 9 chr5 160455660 160455768 -42629764 + MIR3 SINE MIR 15 129 -79 405 165 88 22 chr5 160455771 160455862 -42629670 + L2 LINE L2 3199 3295 -18 556 192 33 0 chr5 160455879 160455999 -42629533 + MIR SINE MIR 12 135 -127 1181 251 143 34 chr5 160456034 160456473 -42629059 - MLT1D LTR MaLR -18 487 1 255 273 0 45 chr5 160456473 160456561 -42628971 + MIR SINE MIR 169 252 -10 811 167 0 0 chr5 160456588 160456714 -42628818 - FLAM_A SINE Alu -3 130 5 261 196 71 0 chr5 160456772 160456828 -42628704 + MIR SINE MIR 201 260 -2 257 301 12 24 chr5 160456822 160456905 -42628627 - L2 LINE L2 -2 3311 3230 * 252 0 0 0 chr5 160457213 160457241 -42628291 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 900 302 44 41 chr5 160458464 160459048 -42626484 + L2 LINE L2 2727 3311 -2 1029 282 27 17 chr5 160459232 160459733 -42625799 - MLT1L LTR MaLR 0 615 76 2837 173 11 2 chr5 160460701 160461169 -42624363 - MER70A LTR ERVL 0 472 1 200 104 83 21 chr5 160461213 160461261 -42624271 + T-rich Low_complexity Low_complexity 4 54 0 207 0 0 0 chr5 160461361 160461384 -42624148 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2150 53 0 0 chr5 160461386 160461648 -42623884 - L1PA4 LINE L1 -8 6147 5886 1399 41 0 6 chr5 160461649 160461820 -42623712 + L1PA4 LINE L1 5707 5876 -279 2075 127 164 11 chr5 160461905 160462276 -42623256 + MSTA LTR MaLR 1 428 0 10269 119 7 36 chr5 160462278 160463904 -42621628 + MSTA-int LTR MaLR 3 1580 0 724 132 0 0 chr5 160463916 160464022 -42621510 + MSTA LTR MaLR 323 428 0 689 287 67 50 chr5 160464117 160464905 -42620627 - L1ME2 LINE L1 -241 5923 5111 2050 122 3 3 chr5 160464905 160465193 -42620339 - AluSx SINE Alu -4 308 21 689 287 67 50 chr5 160465193 160465406 -42620126 - L1ME2 LINE L1 -1053 5111 4903 229 344 15 23 chr5 160465524 160465655 -42619877 - MER5A DNA MER1_type -1 188 59 2010 98 36 0 chr5 160465657 160465921 -42619611 - L1PB1 LINE L1 -7 6144 5775 234 0 0 0 chr5 160465921 160465947 -42619585 + (TG)n Simple_repeat Simple_repeat 2 27 0 2010 98 36 0 chr5 160465947 160466017 -42619515 - L1PB1 LINE L1 -376 5775 5709 2299 114 3 0 chr5 160466163 160466471 -42619061 - AluSc SINE Alu 0 309 1 201 316 13 26 chr5 160468091 160468167 -42617365 - MIR SINE MIR -187 75 1 1486 72 0 21 chr5 160468414 160468607 -42616925 + AluY SINE Alu 118 306 -5 1747 308 78 20 chr5 160468708 160468953 -42616579 + L2 LINE L2 1646 1875 -1439 1747 153 7 39 chr5 160468953 160469115 -42616417 - AluJb SINE Alu -15 297 148 2404 51 27 3 chr5 160469115 160469410 -42616122 - AluY SINE Alu -9 302 1 1747 153 7 39 chr5 160469410 160469554 -42615978 - AluJb SINE Alu -164 148 1 1747 308 78 20 chr5 160469554 160470316 -42615216 + L2 LINE L2 1875 2712 -602 1088 71 0 0 chr5 160470317 160470444 -42615088 + AluSq/x SINE Alu 1 127 -185 1279 252 104 5 chr5 160470459 160470891 -42614641 + L1 LINE L1 2382 2856 -3290 2385 55 7 7 chr5 160470892 160471184 -42614348 + AluY SINE Alu 1 292 -19 343 285 125 14 chr5 160471362 160471506 -42614026 + L2 LINE L2 3153 3312 -1 608 300 40 15 chr5 160471612 160471812 -42613720 - MIR SINE MIR -42 220 16 354 278 46 23 chr5 160472031 160472204 -42613328 + L1 LINE L1 4882 5058 -1088 1076 110 0 0 chr5 160472208 160472344 -42613188 + AluSq/x SINE Alu 1 136 -177 1914 95 23 88 chr5 160472344 160472650 -42612882 + AluSg SINE Alu 1 286 -24 21 0 0 0 chr5 160472650 160472671 -42612861 + AT_rich Low_complexity Low_complexity 1 21 0 1443 200 44 106 chr5 160474060 160474089 -42611443 - L1MC5 LINE L1 -476 7485 7456 2255 101 0 3 chr5 160474089 160474385 -42611147 + AluSq SINE Alu 1 295 -18 1443 200 44 106 chr5 160474385 160474663 -42610869 - L1MC5 LINE L1 -505 7456 7162 2279 79 0 0 chr5 160474663 160474971 -42610561 - AluY SINE Alu 0 308 1 1443 200 44 106 chr5 160474971 160475150 -42610382 - L1MC5 LINE L1 -799 7162 7032 2407 97 0 3 chr5 160475150 160475458 -42610074 - AluSg SINE Alu -3 307 1 1443 200 44 106 chr5 160475458 160475513 -42610019 - L1MC5 LINE L1 -929 7032 6975 412 267 108 9 chr5 160475590 160475727 -42609805 - MLT1H LTR MaLR -349 200 12 256 320 36 52 chr5 160476386 160476580 -42608952 - L1 LINE L1 -1071 5075 4885 255 61 0 0 chr5 160476650 160476683 -42608849 + (CA)n Simple_repeat Simple_repeat 1 33 0 229 326 71 0 chr5 160476826 160476924 -42608608 - LTR67 LTR ERVL -385 172 68 620 247 27 73 chr5 160477089 160477308 -42608224 - MIR SINE MIR -6 256 48 2381 81 10 0 chr5 160477560 160477855 -42607677 + AluSx SINE Alu 3 300 -12 307 305 70 43 chr5 160478661 160478848 -42606684 - L2 LINE L2 -1 3312 3121 447 246 5 126 chr5 160479057 160479107 -42606425 + MER5A DNA MER1_type 7 61 -128 1236 183 115 50 chr5 160479107 160479176 -42606356 - MER2 DNA MER2_type 0 344 281 2213 122 0 7 chr5 160479176 160479479 -42606053 + AluSq SINE Alu 1 301 -12 1236 183 115 50 chr5 160479479 160479732 -42605800 - MER2 DNA MER2_type -63 281 1 447 246 5 126 chr5 160479732 160479748 -42605784 + MER5A DNA MER1_type 61 77 -112 2412 92 0 3 chr5 160479748 160480052 -42605480 + AluSq SINE Alu 1 303 -10 447 246 5 126 chr5 160480052 160480191 -42605341 + MER5A DNA MER1_type 77 188 -1 298 263 17 85 chr5 160480233 160480351 -42605181 - MIR SINE MIR -61 201 92 603 278 49 53 chr5 160480505 160480768 -42604764 + MIR SINE MIR 1 262 0 739 201 25 14 chr5 160480902 160481064 -42604468 + L1MC4 LINE L1 6686 6888 -1142 1868 171 0 0 chr5 160481064 160481357 -42604175 + AluJb SINE Alu 1 293 -19 1868 130 18 115 chr5 160481400 160481784 -42603748 - MER7A DNA MER2_type 0 346 2 264 250 16 0 chr5 160481792 160481872 -42603660 + MER21B LTR ERV1 8 89 -774 2947 209 41 64 chr5 160481996 160482606 -42602926 + MER21B LTR ERV1 103 694 -169 2448 64 0 0 chr5 160482606 160482931 -42602601 - AluSc SINE Alu 0 325 1 2947 209 41 64 chr5 160482931 160483098 -42602434 + MER21B LTR ERV1 694 863 0 1780 243 66 83 chr5 160483108 160483272 -42602260 + L1MC4 LINE L1 6894 7059 -983 2345 76 17 0 chr5 160483272 160483562 -42601970 + AluY SINE Alu 11 305 -6 1780 243 66 83 chr5 160483562 160484190 -42601342 + L1MC4 LINE L1 7059 7672 -370 1724 149 55 3 chr5 160484242 160484551 -42600981 + L1MB7 LINE L1 5841 6165 -19 2452 83 0 0 chr5 160484608 160484910 -42600622 + AluSc SINE Alu 1 302 -7 303 111 111 0 chr5 160484912 160484984 -42600548 + L1MC4 LINE L1 7690 7769 -273 526 123 18 61 chr5 160485094 160485208 -42600324 + Tigger2a DNA MER2_type 1 109 -325 368 240 16 0 chr5 160485208 160485333 -42600199 + CT-rich Low_complexity Low_complexity 1 127 0 1890 170 75 18 chr5 160485333 160485733 -42599799 + Tigger2 DNA MER2_type 2296 2718 0 258 253 46 0 chr5 160485733 160485820 -42599712 + L1MC4 LINE L1 7952 8042 0 2153 110 0 4 chr5 160487487 160487800 -42597732 - AluSx SINE Alu 0 314 3 245 259 120 9 chr5 160489616 160489724 -42595808 + L2 LINE L2 3179 3298 -15 1262 270 168 18 chr5 160489899 160490809 -42594723 - L2 LINE L2 -2 3311 2268 889 253 11 70 chr5 160491967 160492252 -42593280 + MLT1J LTR MaLR 1 268 -243 286 235 167 20 chr5 160492304 160492406 -42593126 + MLT1J LTR MaLR 389 505 -6 2401 77 0 3 chr5 160492742 160493042 -42592490 - AluY SINE Alu -12 299 1 600 261 92 49 chr5 160493292 160493598 -42591934 - L1MC4a LINE L1 -1884 5924 5606 608 112 22 0 chr5 160493912 160494001 -42591531 + AluJb SINE Alu 207 297 -15 461 300 120 4 chr5 160495534 160495767 -42589765 - MIR SINE MIR -2 260 1 471 245 227 0 chr5 160496006 160496169 -42589363 - MIR SINE MIR -4 258 59 1517 149 67 37 chr5 160496478 160496785 -42588747 - AluJb SINE Alu 0 323 9 264 236 79 22 chr5 160497061 160497150 -42588382 + MIR SINE MIR 28 121 -141 282 235 53 91 chr5 160498138 160498325 -42587207 - L1MC4a LINE L1 -105 6016 5835 1044 71 0 0 chr5 160498355 160498481 -42587051 + AluSp/q SINE Alu 174 299 -14 26 0 0 0 chr5 160498817 160498843 -42586689 + AT_rich Low_complexity Low_complexity 1 26 0 1820 182 0 22 chr5 160498904 160499223 -42586309 + AluJo SINE Alu 1 312 0 306 219 24 49 chr5 160500207 160500289 -42585243 + MLT1L LTR MaLR 1 80 -535 704 246 99 108 chr5 160500354 160500374 -42585158 + MLT1L LTR MaLR 119 138 -477 1807 169 48 63 chr5 160500374 160500603 -42584929 - MLT1B LTR MaLR 0 390 168 2184 146 0 0 chr5 160500603 160500911 -42584621 - AluSq SINE Alu -5 308 1 1807 169 48 63 chr5 160500911 160501077 -42584455 - MLT1B LTR MaLR -222 168 1 704 246 99 108 chr5 160501077 160501478 -42584054 + MLT1L LTR MaLR 138 613 -2 1926 144 3 28 chr5 160501563 160501882 -42583650 + AluJo SINE Alu 1 311 -1 522 313 30 22 chr5 160502523 160502753 -42582779 + MIR SINE MIR 31 262 0 2287 88 7 7 chr5 160502804 160503098 -42582434 - AluSc SINE Alu -15 294 1 1037 224 199 14 chr5 160503116 160503402 -42582130 - L1MD3 LINE L1 -12 7983 7645 2392 81 3 13 chr5 160503533 160503841 -42581691 - AluSp SINE Alu -8 305 1 317 287 0 11 chr5 160503864 160503958 -42581574 - MIR SINE MIR -77 185 93 4032 141 8 17 chr5 160504037 160504425 -42581107 - MER39B LTR ERV1 0 653 263 2326 71 0 62 chr5 160504425 160504750 -42580782 - AluY SINE Alu -6 305 1 2258 124 3 0 chr5 160504750 160505056 -42580476 - AluSx SINE Alu -5 307 1 4032 141 8 17 chr5 160505056 160505325 -42580207 - MER39B LTR ERV1 -388 265 1 2322 68 7 35 chr5 160506503 160506813 -42578719 + AluSp SINE Alu 1 301 -12 24 0 0 0 chr5 160507856 160507880 -42577652 + AT_rich Low_complexity Low_complexity 1 24 0 1080 222 18 5 chr5 160508051 160508272 -42577260 - MLT1E2 LTR MaLR -88 538 315 2539 81 0 0 chr5 160508663 160508970 -42576562 + AluY SINE Alu 1 307 -4 1107 201 28 124 chr5 160508974 160509057 -42576475 - L1ME1 LINE L1 -4 6162 6073 2369 96 0 10 chr5 160509057 160509370 -42576162 + AluSg SINE Alu 1 310 0 1107 201 28 124 chr5 160509370 160509619 -42575913 - L1ME1 LINE L1 -93 6073 5879 2298 99 3 10 chr5 160509619 160509922 -42575610 - AluSx SINE Alu -11 301 1 1107 201 28 124 chr5 160509922 160510022 -42575510 - L1ME1 LINE L1 -287 5879 5771 844 159 32 0 chr5 160510022 160510179 -42575353 - L1M4 LINE L1 -2364 3782 3621 2183 101 0 7 chr5 160510541 160510837 -42574695 - AluSc SINE Alu -15 294 1 2325 105 0 0 chr5 160511778 160512073 -42573459 + AluSq SINE Alu 2 296 -17 367 262 57 25 chr5 160512277 160512399 -42573133 + MIR SINE MIR 28 153 -55 2589 46 3 3 chr5 160512885 160513190 -42572342 + AluY SINE Alu 1 305 -6 716 191 0 0 chr5 160514863 160514989 -42570543 + L1PA16 LINE L1 6039 6164 -2 2296 89 24 0 chr5 160515066 160515357 -42570175 + AluSx SINE Alu 1 298 -14 1681 191 85 21 chr5 160515385 160515763 -42569769 - L1MD2 LINE L1 -229 6130 5729 2470 178 22 34 chr5 160515781 160516183 -42569349 - L1MB4 LINE L1 0 6180 5775 2537 52 0 7 chr5 160516183 160516490 -42569042 - AluY SINE Alu -6 305 1 2470 178 22 34 chr5 160516490 160516613 -42568919 - L1MB4 LINE L1 -405 5775 5659 1698 163 34 31 chr5 160516613 160516907 -42568625 - AluJb SINE Alu -15 297 3 582 168 0 9 chr5 160516915 160517014 -42568518 - AluJb SINE Alu -12 300 201 259 186 14 14 chr5 160518160 160518230 -42567302 + (TG)n Simple_repeat Simple_repeat 2 71 0 605 272 123 4 chr5 160518667 160518895 -42566637 - MIR SINE MIR 0 262 8 274 154 0 0 chr5 160518970 160519009 -42566523 + L1M3 LINE L1 5730 5768 -415 2191 96 27 0 chr5 160519558 160519850 -42565682 - AluSp SINE Alu -11 302 3 333 293 156 30 chr5 160519942 160520205 -42565327 - L1MEd LINE L1 -4872 1247 952 2086 59 99 4 chr5 160520206 160520479 -42565053 - AluY SINE Alu -12 299 1 28 0 0 0 chr5 160520577 160520605 -42564927 + AT_rich Low_complexity Low_complexity 1 28 0 2784 76 42 87 chr5 160520649 160521122 -42564410 - L1PA14 LINE L1 0 6161 5710 574 225 0 0 chr5 160521127 160521247 -42564285 - L1ME1 LINE L1 -38 6128 6009 * 1477 264 29 50 chr5 160521243 160521798 -42563734 - L1ME LINE L1 -4939 1089 641 2327 97 13 13 chr5 160521798 160522109 -42563423 + AluY SINE Alu 1 311 0 1477 264 29 50 chr5 160522109 160522357 -42563175 - L1ME LINE L1 -5387 641 389 195 42 0 0 chr5 160522513 160522537 -42562995 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 307 337 52 41 chr5 160522602 160522970 -42562562 - L1ME LINE L1 -5610 460 89 968 265 85 82 chr5 160523078 160523769 -42561763 - L1MEd LINE L1 -5156 963 271 1990 201 12 38 chr5 160523956 160523990 -42561542 - MLT2D LTR ERVL -8 406 373 294 73 0 0 chr5 160523990 160524031 -42561501 + (TG)n Simple_repeat Simple_repeat 1 41 0 1990 201 12 38 chr5 160524031 160524134 -42561398 - MLT2D LTR ERVL -41 373 269 839 200 6 18 chr5 160524134 160524299 -42561233 + FRAM SINE Alu 4 166 0 1990 201 12 38 chr5 160524299 160524577 -42560955 - MLT2D LTR ERVL -145 269 1 321 299 26 19 chr5 160524618 160524772 -42560760 - L1MC5 LINE L1 -306 7655 7501 3375 244 59 54 chr5 160524776 160525654 -42559878 + HAL1 LINE L1 1122 2011 -496 2276 101 0 0 chr5 160525654 160525952 -42559580 - AluY SINE Alu -13 298 1 3375 244 59 54 chr5 160525952 160526452 -42559080 + HAL1 LINE L1 2011 2507 0 1846 137 34 27 chr5 160526476 160526769 -42558763 - AluJb SINE Alu -13 299 5 1097 179 25 5 chr5 160526907 160527108 -42558424 - MER3 DNA MER1_type -3 206 2 751 313 8 23 chr5 160527167 160527423 -42558109 + MIR SINE MIR 2 253 -9 249 83 0 0 chr5 160527436 160527472 -42558060 + (TCC)n Simple_repeat Simple_repeat 2 37 0 919 311 68 13 chr5 160527573 160527953 -42557579 + LTR16C LTR ERVL 90 490 -1 186 189 0 0 chr5 160527954 160527991 -42557541 + (CAT)n Simple_repeat Simple_repeat 2 38 0 2418 106 0 0 chr5 160528002 160528314 -42557218 - AluSx SINE Alu 0 312 1 276 390 0 6 chr5 160528662 160528821 -42556711 - MIR SINE MIR 0 262 105 1811 167 65 40 chr5 160529387 160529741 -42555791 - MLT1A1 LTR MaLR 0 365 3 2085 125 7 13 chr5 160530064 160530368 -42555164 - AluSx SINE Alu -3 309 8 284 224 122 112 chr5 160531353 160531549 -42553983 + L2 LINE L2 2825 3022 -250 270 246 14 0 chr5 160531904 160531973 -42553559 - MER113 DNA MER1_type? -446 75 6 221 241 205 18 chr5 160531992 160532104 -42553428 + L2 LINE L2 3180 3312 -1 342 313 35 59 chr5 160532286 160532671 -42552861 - L3 LINE CR1 -301 1276 827 912 256 29 8 chr5 160532731 160532969 -42552563 - MIR SINE MIR 0 262 20 905 245 71 65 chr5 160533223 160533817 -42551715 + LTR41 LTR ERVL 1 773 0 1999 113 19 0 chr5 160533838 160534104 -42551428 + AluSx SINE Alu 1 271 -41 434 140 0 53 chr5 160534138 160534252 -42551280 + (TTTC)n Simple_repeat Simple_repeat 4 111 0 275 71 24 0 chr5 160534288 160534330 -42551202 + (CCCTG)n Simple_repeat Simple_repeat 2 44 0 646 150 71 0 chr5 160534334 160534447 -42551085 - AluSg/x SINE Alu 0 312 192 2382 91 0 3 chr5 160534486 160534793 -42550739 + AluSc SINE Alu 1 306 -3 269 122 24 0 chr5 160537004 160537045 -42548487 - MER112 DNA MER1_type -1 259 218 297 223 10 78 chr5 160537123 160537226 -42548306 - MER112 DNA MER1_type -151 109 14 249 262 49 0 chr5 160538756 160538817 -42546715 + L2 LINE L2 3246 3309 -4 194 191 71 107 chr5 160540007 160540091 -42545441 + MER5A DNA MER1_type 30 110 -79 526 253 163 0 chr5 160541330 160541496 -42544036 + MIR SINE MIR 70 262 0 1255 200 0 0 chr5 160541972 160542192 -42543340 + AluJo SINE Alu 1 220 -92 255 111 0 0 chr5 160542192 160542228 -42543304 + FLAM SINE Alu 86 121 -12 1544 187 37 40 chr5 160542245 160542544 -42542988 + AluJo SINE Alu 1 298 -14 319 246 108 24 chr5 160542593 160542760 -42542772 - HAL1b LINE L1 -57 1291 1111 844 281 53 42 chr5 160542769 160543203 -42542329 + L1MB8 LINE L1 5374 5812 -1996 235 336 95 17 chr5 160543527 160543643 -42541889 + L2 LINE L2 3123 3247 -25 21 0 0 0 chr5 160543816 160543837 -42541695 + AT_rich Low_complexity Low_complexity 1 21 0 283 213 96 59 chr5 160544258 160544394 -42541138 - L1ME4a LINE L1 -11 6110 5970 1893 144 48 0 chr5 160545877 160546168 -42539364 + AluJo SINE Alu 1 305 -7 189 0 0 0 chr5 160546176 160546197 -42539335 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 1453 117 9 0 chr5 160547319 160547533 -42537999 + MER20 DNA MER1_type 1 216 -3 2432 92 0 0 chr5 160547952 160548258 -42537274 - AluSg SINE Alu -4 306 1 397 266 38 43 chr5 160548453 160548637 -42536895 - L1MC4a LINE L1 -1877 5931 5749 405 249 51 121 chr5 160548926 160549413 -42536119 + L2 LINE L2 2858 3310 -3 226 272 64 37 chr5 160549538 160549673 -42535859 + MIR3 SINE MIR 51 196 -12 1229 209 47 10 chr5 160549696 160549992 -42535540 + L1MB8 LINE L1 5792 6098 -80 390 246 123 12 chr5 160550112 160550283 -42535249 + MER113 DNA MER1_type? 9 198 -323 495 155 31 0 chr5 160550367 160550464 -42535068 + MER5A DNA MER1_type 10 109 -80 647 202 9 0 chr5 160550605 160550719 -42534813 + FLAM_A SINE Alu 12 126 -16 1396 136 0 14 chr5 160551053 160551273 -42534259 - AluJo SINE Alu -11 301 85 251 97 0 0 chr5 160551273 160551304 -42534228 - AluSp/q SINE Alu -53 250 220 1943 112 0 4 chr5 160551304 160551573 -42533959 - AluY SINE Alu -43 268 1 1258 62 0 0 chr5 160551573 160551717 -42533815 - AluY SINE Alu -167 144 1 247 301 29 39 chr5 160552992 160553095 -42532437 + L2 LINE L2 3197 3298 -15 181 280 120 8 chr5 160553341 160553466 -42532066 - L2 LINE L2 -56 3257 3119 180 186 35 177 chr5 160553536 160553649 -42531883 - L2 LINE L2 -232 3040 2944 1226 245 159 5 chr5 160554066 160554437 -42531095 - MLT1J2 LTR MaLR 0 450 23 2519 68 0 0 chr5 160554635 160554929 -42530603 - AluY SINE Alu -17 294 1 2008 131 3 7 chr5 160554941 160555238 -42530294 - AluSx SINE Alu -11 301 6 523 304 38 6 chr5 160555995 160556153 -42529379 - MIR SINE MIR -79 183 21 1103 275 23 6 chr5 160556166 160556515 -42529017 + L2 LINE L2 2337 2691 -623 622 271 67 47 chr5 160556516 160556815 -42528717 - MLT1J LTR MaLR -112 399 95 388 318 78 12 chr5 160556854 160557096 -42528436 - L2 LINE L2 -652 2662 2405 200 303 28 73 chr5 160558076 160558254 -42527278 + MIR SINE MIR 46 215 -47 598 241 145 14 chr5 160559523 160559730 -42525802 + MIR SINE MIR 15 248 -14 528 284 42 23 chr5 160559775 160559990 -42525542 - L2 LINE L2 -12 3301 3083 281 252 94 50 chr5 160560015 160560174 -42525358 + L2 LINE L2 2912 3077 -236 2217 106 0 0 chr5 160560271 160560584 -42524948 - AluSx SINE Alu 0 313 1 276 294 24 0 chr5 160560681 160560766 -42524766 + MIR SINE MIR 20 106 -156 376 352 94 6 chr5 160563015 160563524 -42522008 + L2 LINE L2 1713 2266 -1048 781 328 55 3 chr5 160563527 160563838 -42521694 - MER102b DNA MER1_type 0 341 15 189 315 117 62 chr5 160563862 160564186 -42521346 + L2 LINE L2 2290 2631 -683 797 278 52 81 chr5 160564238 160564385 -42521147 + MLT1L LTR MaLR 150 300 -315 2241 129 3 0 chr5 160564385 160564694 -42520838 + AluSq SINE Alu 1 310 -3 797 278 52 81 chr5 160564694 160565025 -42520507 + MLT1L LTR MaLR 300 614 -1 361 262 19 0 chr5 160565309 160565412 -42520120 - L2 LINE L2 -1 3312 3208 1209 106 181 0 chr5 160565548 160565747 -42519785 - MER46A DNA MER2_type -1 235 1 1961 138 3 14 chr5 160565774 160566101 -42519431 - AluSx SINE Alu 0 312 1 383 255 85 85 chr5 160566107 160566237 -42519295 - L1MC4 LINE L1 -1 8041 7909 378 0 0 0 chr5 160566237 160566279 -42519253 + (CA)n Simple_repeat Simple_repeat 1 42 0 383 255 85 85 chr5 160566279 160566383 -42519149 - L1MC4 LINE L1 -132 7910 7807 2761 39 0 0 chr5 160566384 160566694 -42518838 + AluY SINE Alu 1 310 -1 503 140 9 75 chr5 160566705 160566812 -42518720 + FAM SINE Alu 40 139 -46 247 214 51 60 chr5 160566812 160566929 -42518603 - L1MC4 LINE L1 -218 7824 7709 306 275 0 0 chr5 160567131 160567211 -42518321 + L2 LINE L2 3191 3270 -2 21 0 0 0 chr5 160570505 160570526 -42515006 + AT_rich Low_complexity Low_complexity 1 21 0 2029 96 4 4 chr5 160570914 160571175 -42514357 - AluSx SINE Alu -49 263 3 1550 176 84 0 chr5 160571742 160572015 -42513517 - AluJb SINE Alu -16 296 1 2105 108 10 41 chr5 160572377 160572691 -42512841 - AluSx SINE Alu -8 304 1 396 177 0 0 chr5 160573895 160573957 -42511575 - MER20 DNA MER1_type 0 219 158 210 233 0 0 chr5 160573957 160574017 -42511515 + (TGG)n Simple_repeat Simple_repeat 1 60 0 517 226 6 94 chr5 160574031 160574190 -42511342 - MER20 DNA MER1_type -69 150 6 651 132 19 0 chr5 160574284 160574390 -42511142 - AluSx SINE Alu 0 310 203 816 105 0 0 chr5 160574391 160574496 -42511036 - AluSx SINE Alu -208 105 1 2172 111 0 0 chr5 160575190 160575470 -42510062 - AluSx SINE Alu -32 280 1 213 211 18 0 chr5 160575496 160575553 -42509979 - L2 LINE L2 -238 3034 2977 507 320 139 20 chr5 160575597 160575891 -42509641 - L2 LINE L2 -339 2975 2647 845 216 14 106 chr5 160576048 160576200 -42509332 - MLT1C LTR MaLR -152 315 199 2356 96 3 10 chr5 160576200 160576514 -42509018 - AluSx SINE Alu 0 312 1 845 216 14 106 chr5 160576514 160576644 -42508888 - MLT1C LTR MaLR -268 199 59 445 258 109 16 chr5 160576781 160576909 -42508623 + MER102b DNA MER1_type 200 339 -2 277 103 17 52 chr5 160578143 160578201 -42507331 + L2 LINE L2 3258 3313 0 593 271 24 35 chr5 160578558 160578722 -42506810 - L1MC4a LINE L1 -248 5916 5785 1242 148 88 0 chr5 160578722 160578939 -42506593 - MER46A DNA MER2_type 0 236 1 593 271 24 35 chr5 160578939 160579068 -42506464 - L1MC4a LINE L1 -379 5785 5656 1377 169 63 100 chr5 160579345 160579724 -42505808 + MLT1A1 LTR MaLR 1 365 0 2496 80 0 10 chr5 160580300 160580612 -42504920 + AluSc SINE Alu 1 309 0 347 301 119 0 chr5 160581136 160581329 -42504203 + MIR SINE MIR 29 244 -18 2383 151 47 19 chr5 160581411 160581930 -42503602 + MLT2A2 LTR ERVL 1 554 0 2221 128 0 0 chr5 160582052 160582357 -42503175 - AluSx SINE Alu -7 305 1 2387 78 3 0 chr5 160582650 160582943 -42502589 + AluSp SINE Alu 1 294 -19 259 321 127 24 chr5 160584895 160585060 -42500472 - MER5A DNA MER1_type -1 188 7 257 245 0 51 chr5 160586535 160586633 -42498899 + T-rich Low_complexity Low_complexity 2 94 0 412 213 74 9 chr5 160587314 160587422 -42498110 + MIR3 SINE MIR 15 129 -79 405 165 88 22 chr5 160587425 160587516 -42498016 + L2 LINE L2 3199 3295 -18 556 192 33 0 chr5 160587533 160587653 -42497879 + MIR SINE MIR 12 135 -127 1165 255 132 23 chr5 160587688 160588127 -42497405 - MLT1D LTR MaLR -18 487 1 270 261 0 45 chr5 160588127 160588215 -42497317 + MIR SINE MIR 169 252 -10 819 165 0 0 chr5 160588242 160588369 -42497163 - FLAM_A SINE Alu -2 131 5 261 196 71 0 chr5 160588427 160588483 -42497049 + MIR SINE MIR 201 260 -2 257 301 12 24 chr5 160588477 160588560 -42496972 - L2 LINE L2 -2 3311 3230 * 252 0 0 0 chr5 160588868 160588896 -42496636 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 909 300 44 41 chr5 160590118 160590702 -42494830 + L2 LINE L2 2727 3311 -2 1029 282 27 17 chr5 160590886 160591387 -42494145 - MLT1L LTR MaLR 0 615 76 2837 173 11 2 chr5 160592355 160592823 -42492709 - MER70A LTR ERVL 0 472 1 200 104 83 21 chr5 160592867 160592915 -42492617 + T-rich Low_complexity Low_complexity 4 54 0 2202 49 0 0 chr5 160593031 160593298 -42492234 - L1PA4 LINE L1 -3 6152 5886 1399 41 0 6 chr5 160593299 160593470 -42492062 + L1PA4 LINE L1 5707 5876 -279 2099 124 164 11 chr5 160593555 160593926 -42491606 + MSTA LTR MaLR 1 428 0 10286 118 7 36 chr5 160593928 160595554 -42489978 + MSTA-int LTR MaLR 3 1580 0 724 132 0 0 chr5 160595566 160595672 -42489860 + MSTA LTR MaLR 323 428 0 684 287 67 50 chr5 160595767 160596555 -42488977 - L1ME2 LINE L1 -241 5923 5111 2050 122 3 3 chr5 160596555 160596843 -42488689 - AluSx SINE Alu -4 308 21 684 287 67 50 chr5 160596843 160597056 -42488476 - L1ME2 LINE L1 -1053 5111 4903 229 344 15 23 chr5 160597174 160597305 -42488227 - MER5A DNA MER1_type -1 188 59 2010 98 36 0 chr5 160597307 160597571 -42487961 - L1PB1 LINE L1 -7 6144 5775 234 0 0 0 chr5 160597571 160597597 -42487935 + (TG)n Simple_repeat Simple_repeat 2 27 0 2010 98 36 0 chr5 160597597 160597667 -42487865 - L1PB1 LINE L1 -376 5775 5709 2320 110 3 0 chr5 160597814 160598122 -42487410 - AluSc SINE Alu 0 309 1 201 316 13 26 chr5 160599742 160599818 -42485714 - MIR SINE MIR -187 75 1 1479 73 0 21 chr5 160600065 160600257 -42485275 + AluY SINE Alu 118 305 -6 1732 309 82 20 chr5 160600358 160600603 -42484929 + L2 LINE L2 1646 1874 -1440 1747 153 7 39 chr5 160600603 160600765 -42484767 - AluJb SINE Alu -15 297 148 2413 51 27 3 chr5 160600765 160601061 -42484471 - AluY SINE Alu -8 303 1 1747 153 7 39 chr5 160601061 160601205 -42484327 - AluJb SINE Alu -164 148 1 1732 309 82 20 chr5 160601205 160601964 -42483568 + L2 LINE L2 1874 2712 -602 1060 79 0 0 chr5 160601965 160602092 -42483440 + AluSq/x SINE Alu 1 127 -186 1269 255 104 5 chr5 160602107 160602539 -42482993 + L1 LINE L1 2382 2856 -3290 2385 55 7 7 chr5 160602540 160602832 -42482700 + AluY SINE Alu 1 292 -19 343 285 125 14 chr5 160603010 160603154 -42482378 + L2 LINE L2 3153 3312 -1 608 300 40 15 chr5 160603260 160603460 -42482072 - MIR SINE MIR -42 220 16 354 278 46 23 chr5 160603679 160603852 -42481680 + L1 LINE L1 4882 5058 -1088 1076 110 0 0 chr5 160603856 160603992 -42481540 + AluSq/x SINE Alu 1 136 -177 1944 96 23 73 chr5 160603992 160604293 -42481239 + AluSg SINE Alu 1 286 -24 21 0 0 0 chr5 160604293 160604314 -42481218 + AT_rich Low_complexity Low_complexity 1 21 0 1432 202 44 105 chr5 160605703 160605732 -42479800 - L1MC5 LINE L1 -476 7485 7456 2255 101 0 3 chr5 160605732 160606028 -42479504 + AluSq SINE Alu 1 295 -18 1432 202 44 105 chr5 160606028 160606306 -42479226 - L1MC5 LINE L1 -505 7456 7163 2279 79 0 0 chr5 160606306 160606610 -42478922 - AluY SINE Alu 0 304 1 1432 202 44 105 chr5 160606610 160606788 -42478744 - L1MC5 LINE L1 -798 7163 7032 2429 94 0 3 chr5 160606788 160607096 -42478436 - AluSg SINE Alu -3 307 1 1432 202 44 105 chr5 160607096 160607151 -42478381 - L1MC5 LINE L1 -929 7032 6975 412 267 108 9 chr5 160607228 160607365 -42478167 - MLT1H LTR MaLR -349 200 12 256 320 36 52 chr5 160608024 160608218 -42477314 - L1 LINE L1 -1071 5075 4885 255 61 0 0 chr5 160608288 160608321 -42477211 + (CA)n Simple_repeat Simple_repeat 1 33 0 229 326 71 0 chr5 160608464 160608562 -42476970 - LTR67 LTR ERVL -385 172 68 620 247 27 73 chr5 160608727 160608946 -42476586 - MIR SINE MIR -6 256 48 2381 81 10 0 chr5 160609198 160609493 -42476039 + AluSx SINE Alu 3 300 -12 282 304 143 84 chr5 160610299 160610585 -42474947 - L2 LINE L2 -1 3271 2969 434 251 5 126 chr5 160610695 160610745 -42474787 + MER5A DNA MER1_type 7 61 -128 1250 180 115 50 chr5 160610745 160610814 -42474718 - MER2 DNA MER2_type 0 344 281 2213 122 0 7 chr5 160610814 160611117 -42474415 + AluSq SINE Alu 1 301 -12 1250 180 115 50 chr5 160611117 160611370 -42474162 - MER2 DNA MER2_type -63 281 1 434 251 5 126 chr5 160611370 160611386 -42474146 + MER5A DNA MER1_type 61 77 -112 2445 86 0 3 chr5 160611386 160611690 -42473842 + AluSq SINE Alu 1 303 -10 434 251 5 126 chr5 160611690 160611829 -42473703 + MER5A DNA MER1_type 77 188 -1 298 263 17 85 chr5 160611871 160611989 -42473543 - MIR SINE MIR -61 201 92 639 273 45 53 chr5 160612143 160612407 -42473125 + MIR SINE MIR 1 262 0 739 201 25 14 chr5 160612541 160612703 -42472829 + L1MC4 LINE L1 6686 6888 -1142 1839 174 0 0 chr5 160612703 160612996 -42472536 + AluJb SINE Alu 1 293 -19 1888 128 18 115 chr5 160613039 160613423 -42472109 - MER7A DNA MER2_type 0 346 2 252 243 16 0 chr5 160613431 160613511 -42472021 + MER21B LTR ERV1 8 89 -774 2972 208 41 64 chr5 160613635 160614245 -42471287 + MER21B LTR ERV1 103 694 -169 2400 75 0 0 chr5 160614245 160614570 -42470962 - AluSc SINE Alu 0 325 1 2972 208 41 64 chr5 160614570 160614737 -42470795 + MER21B LTR ERV1 694 863 0 1683 236 63 106 chr5 160614747 160614911 -42470621 + L1MC4 LINE L1 6894 7064 -978 2329 76 17 0 chr5 160614911 160615199 -42470333 + AluY SINE Alu 11 303 -8 1683 236 63 106 chr5 160615199 160615410 -42470122 + L1MC4 LINE L1 7064 7283 -759 2779 0 3 3 chr5 160615410 160615708 -42469824 - AluYa5 SINE Alu -13 298 1 1683 236 63 106 chr5 160615708 160616145 -42469387 + L1MC4 LINE L1 7283 7672 -370 1745 146 55 3 chr5 160616197 160616506 -42469026 + L1MB7 LINE L1 5841 6165 -19 2488 76 0 0 chr5 160616563 160616865 -42468667 + AluSc SINE Alu 1 302 -7 303 111 111 0 chr5 160616867 160616939 -42468593 + L1MC4 LINE L1 7690 7769 -273 526 123 18 61 chr5 160617049 160617163 -42468369 + Tigger2a DNA MER2_type 1 109 -325 375 233 0 0 chr5 160617163 160617266 -42468266 + CT-rich Low_complexity Low_complexity 1 103 0 1890 170 75 18 chr5 160617289 160617689 -42467843 + Tigger2 DNA MER2_type 2296 2718 0 258 253 46 0 chr5 160617689 160617776 -42467756 + L1MC4 LINE L1 7952 8042 0 2167 107 0 4 chr5 160619442 160619755 -42465777 - AluSx SINE Alu 0 314 3 245 259 120 9 chr5 160621571 160621679 -42463853 + L2 LINE L2 3179 3298 -15 1260 270 168 18 chr5 160621851 160622761 -42462771 - L2 LINE L2 -2 3311 2268 883 253 11 70 chr5 160623919 160624204 -42461328 + MLT1J LTR MaLR 1 268 -243 286 235 167 20 chr5 160624256 160624358 -42461174 + MLT1J LTR MaLR 389 505 -6 2371 76 0 7 chr5 160624694 160624995 -42460537 - AluY SINE Alu -12 299 1 605 261 92 49 chr5 160625245 160625551 -42459981 - L1MC4a LINE L1 -1884 5924 5606 601 114 23 0 chr5 160625862 160625950 -42459582 + AluJb SINE Alu 207 296 -16 461 300 120 4 chr5 160627483 160627716 -42457816 - MIR SINE MIR -2 260 1 471 245 227 0 chr5 160627955 160628118 -42457414 - MIR SINE MIR -4 258 59 1517 149 67 37 chr5 160628427 160628739 -42456793 - AluJb SINE Alu 0 328 9 267 247 56 0 chr5 160629015 160629104 -42456428 + MIR SINE MIR 28 121 -141 282 235 53 91 chr5 160630092 160630279 -42455253 - L1MC4a LINE L1 -105 6016 5835 1038 78 0 0 chr5 160630309 160630437 -42455095 + AluSp/q SINE Alu 174 301 -12 29 0 0 0 chr5 160630773 160630802 -42454730 + AT_rich Low_complexity Low_complexity 1 29 0 1820 182 0 22 chr5 160630860 160631179 -42454353 + AluJo SINE Alu 1 312 0 306 219 24 49 chr5 160632163 160632245 -42453287 + MLT1L LTR MaLR 1 80 -535 704 246 99 108 chr5 160632310 160632330 -42453202 + MLT1L LTR MaLR 119 138 -477 1793 172 48 63 chr5 160632330 160632559 -42452973 - MLT1B LTR MaLR 0 390 168 2209 142 0 0 chr5 160632559 160632868 -42452664 - AluSq SINE Alu -4 309 1 1793 172 48 63 chr5 160632868 160633034 -42452498 - MLT1B LTR MaLR -222 168 1 704 246 99 108 chr5 160633034 160633435 -42452097 + MLT1L LTR MaLR 138 613 -2 1884 151 3 28 chr5 160633520 160633839 -42451693 + AluJo SINE Alu 1 311 -1 522 313 30 22 chr5 160634480 160634710 -42450822 + MIR SINE MIR 31 262 0 2273 92 7 7 chr5 160634761 160635056 -42450476 - AluSc SINE Alu -14 295 1 1037 224 199 14 chr5 160635074 160635360 -42450172 - L1MD3 LINE L1 -12 7983 7645 2392 81 3 13 chr5 160635491 160635799 -42449733 - AluSp SINE Alu -8 305 1 317 287 0 11 chr5 160635822 160635916 -42449616 - MIR SINE MIR -77 185 93 4031 141 8 17 chr5 160635995 160636383 -42449149 - MER39B LTR ERV1 0 653 263 2336 72 0 53 chr5 160636383 160636704 -42448828 - AluY SINE Alu -7 304 1 2258 124 3 0 chr5 160636704 160637010 -42448522 - AluSx SINE Alu -5 307 1 4031 141 8 17 chr5 160637010 160637279 -42448253 - MER39B LTR ERV1 -388 265 1 2312 68 7 36 chr5 160638457 160638766 -42446766 + AluSp SINE Alu 1 300 -13 24 0 0 0 chr5 160639809 160639833 -42445699 + AT_rich Low_complexity Low_complexity 1 24 0 1073 222 18 5 chr5 160640004 160640225 -42445307 - MLT1E2 LTR MaLR -88 538 315 2523 82 0 0 chr5 160640616 160640921 -42444611 + AluY SINE Alu 1 305 -6 1089 199 28 130 chr5 160640925 160641008 -42444524 - L1ME1 LINE L1 -4 6162 6072 2382 93 0 10 chr5 160641008 160641320 -42444212 + AluSg SINE Alu 1 309 -1 1089 199 28 130 chr5 160641320 160641572 -42443960 - L1ME1 LINE L1 -94 6072 5880 2290 99 3 10 chr5 160641572 160641874 -42443658 - AluSx SINE Alu -12 300 1 1089 199 28 130 chr5 160641874 160641974 -42443558 - L1ME1 LINE L1 -286 5880 5771 837 166 32 0 chr5 160641974 160642131 -42443401 - L1M4 LINE L1 -2364 3782 3621 2183 101 0 7 chr5 160642494 160642790 -42442742 - AluSc SINE Alu -15 294 1 2325 105 0 0 chr5 160643731 160644026 -42441506 + AluSq SINE Alu 2 296 -17 367 262 57 25 chr5 160644230 160644352 -42441180 + MIR SINE MIR 28 153 -55 2573 55 3 3 chr5 160644838 160645149 -42440383 + AluY SINE Alu 1 311 0 716 191 0 0 chr5 160646815 160646941 -42438591 + L1PA16 LINE L1 6039 6164 -2 2296 89 24 0 chr5 160647018 160647309 -42438223 + AluSx SINE Alu 1 298 -14 1681 191 85 21 chr5 160647337 160647715 -42437817 - L1MD2 LINE L1 -229 6130 5729 2456 179 22 34 chr5 160647733 160648135 -42437397 - L1MB4 LINE L1 0 6180 5775 2500 56 0 7 chr5 160648135 160648441 -42437091 - AluY SINE Alu -7 304 1 2456 179 22 34 chr5 160648441 160648564 -42436968 - L1MB4 LINE L1 -405 5775 5659 1692 163 34 34 chr5 160648564 160648859 -42436673 - AluJb SINE Alu -15 297 3 594 165 0 9 chr5 160648867 160648968 -42436564 - AluJb SINE Alu -10 302 201 259 186 14 14 chr5 160650114 160650184 -42435348 + (TG)n Simple_repeat Simple_repeat 2 71 0 589 276 123 4 chr5 160650621 160650849 -42434683 - MIR SINE MIR 0 262 8 274 154 0 0 chr5 160650924 160650963 -42434569 + L1M3 LINE L1 5730 5768 -403 2204 92 27 0 chr5 160651512 160651804 -42433728 - AluSp SINE Alu -11 302 3 333 293 156 30 chr5 160651896 160652159 -42433373 - L1MEd LINE L1 -4872 1247 952 2504 57 0 3 chr5 160652160 160652460 -42433072 - AluY SINE Alu -12 299 1 28 0 0 0 chr5 160652558 160652586 -42432946 + AT_rich Low_complexity Low_complexity 1 28 0 2784 76 42 87 chr5 160652630 160653103 -42432429 - L1PA14 LINE L1 0 6161 5710 574 225 0 0 chr5 160653108 160653228 -42432304 - L1ME1 LINE L1 -38 6128 6009 * 1453 262 29 56 chr5 160653224 160653779 -42431753 - L1ME LINE L1 -4939 1089 646 2282 103 13 13 chr5 160653779 160654090 -42431442 + AluY SINE Alu 1 311 0 1453 262 29 56 chr5 160654090 160654342 -42431190 - L1ME LINE L1 -5382 646 389 231 36 0 0 chr5 160654498 160654526 -42431006 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 307 337 52 41 chr5 160654591 160654959 -42430573 - L1ME LINE L1 -5610 460 89 984 267 79 90 chr5 160655067 160655823 -42429709 - L1MEd LINE L1 -5156 963 216 1990 201 12 38 chr5 160655945 160655979 -42429553 - MLT2D LTR ERVL -8 406 373 294 73 0 0 chr5 160655979 160656020 -42429512 + (TG)n Simple_repeat Simple_repeat 1 41 0 1990 201 12 38 chr5 160656020 160656123 -42429409 - MLT2D LTR ERVL -41 373 269 850 194 6 18 chr5 160656123 160656288 -42429244 + FRAM SINE Alu 4 166 0 1990 201 12 38 chr5 160656288 160656566 -42428966 - MLT2D LTR ERVL -145 269 1 321 299 26 19 chr5 160656607 160656761 -42428771 - L1MC5 LINE L1 -306 7655 7501 3379 250 56 51 chr5 160656765 160657643 -42427889 + HAL1 LINE L1 1122 2011 -496 2276 101 0 0 chr5 160657643 160657941 -42427591 - AluY SINE Alu -13 298 1 3379 250 56 51 chr5 160657941 160658441 -42427091 + HAL1 LINE L1 2011 2507 0 1846 137 34 27 chr5 160658465 160658758 -42426774 - AluJb SINE Alu -13 299 5 1097 179 25 5 chr5 160658896 160659097 -42426435 - MER3 DNA MER1_type -3 206 2 751 313 8 23 chr5 160659156 160659412 -42426120 + MIR SINE MIR 2 253 -9 249 83 0 0 chr5 160659425 160659461 -42426071 + (TCC)n Simple_repeat Simple_repeat 2 37 0 919 311 68 13 chr5 160659562 160659942 -42425590 + LTR16C LTR ERVL 90 490 -1 186 189 0 0 chr5 160659943 160659980 -42425552 + (CAT)n Simple_repeat Simple_repeat 2 38 0 2405 107 0 0 chr5 160659990 160660300 -42425232 - AluSx SINE Alu -2 310 1 276 390 0 6 chr5 160660648 160660807 -42424725 - MIR SINE MIR 0 262 105 1811 167 65 40 chr5 160661373 160661727 -42423805 - MLT1A1 LTR MaLR 0 365 3 2085 125 7 13 chr5 160662050 160662354 -42423178 - AluSx SINE Alu -3 309 8 292 219 122 112 chr5 160663339 160663535 -42421997 + L2 LINE L2 2825 3022 -250 270 246 14 0 chr5 160663890 160663959 -42421573 - MER113 DNA MER1_type? -446 75 6 221 241 205 18 chr5 160663978 160664090 -42421442 + L2 LINE L2 3180 3312 -1 334 318 34 57 chr5 160664272 160664658 -42420874 - L3 LINE CR1 -301 1276 827 912 256 29 8 chr5 160664718 160664956 -42420576 - MIR SINE MIR 0 262 20 905 245 71 65 chr5 160665210 160665804 -42419728 + LTR41 LTR ERVL 1 773 0 1999 113 19 0 chr5 160665825 160666091 -42419441 + AluSx SINE Alu 1 271 -41 434 140 0 53 chr5 160666125 160666239 -42419293 + (TTTC)n Simple_repeat Simple_repeat 4 111 0 399 41 0 0 chr5 160666271 160666320 -42419212 + (CCCTG)n Simple_repeat Simple_repeat 2 50 0 646 150 71 0 chr5 160666324 160666437 -42419095 - AluSg/x SINE Alu 0 310 190 2391 91 0 3 chr5 160666476 160666784 -42418748 + AluSc SINE Alu 1 307 -2 269 122 24 0 chr5 160668994 160669035 -42416497 - MER112 DNA MER1_type -1 259 218 297 223 10 78 chr5 160669113 160669216 -42416316 - MER112 DNA MER1_type -151 109 14 249 262 49 0 chr5 160670747 160670808 -42414724 + L2 LINE L2 3246 3309 -4 182 202 71 107 chr5 160671998 160672082 -42413450 + MER5A DNA MER1_type 30 110 -79 526 253 163 0 chr5 160673321 160673487 -42412045 + MIR SINE MIR 70 262 0 1255 200 0 0 chr5 160673964 160674184 -42411348 + AluJo SINE Alu 1 220 -92 255 111 0 0 chr5 160674184 160674220 -42411312 + FLAM SINE Alu 86 121 -12 1559 187 33 40 chr5 160674237 160674537 -42410995 + AluJo SINE Alu 1 298 -14 319 246 108 24 chr5 160674586 160674753 -42410779 - HAL1b LINE L1 -57 1291 1111 858 279 53 42 chr5 160674762 160675196 -42410336 + L1MB8 LINE L1 5374 5812 -1996 235 336 95 17 chr5 160675520 160675636 -42409896 + L2 LINE L2 3123 3247 -25 21 0 0 0 chr5 160675809 160675830 -42409702 + AT_rich Low_complexity Low_complexity 1 21 0 283 213 96 59 chr5 160676251 160676387 -42409145 - L1ME4a LINE L1 -11 6110 5970 1832 148 52 0 chr5 160677870 160678160 -42407372 + AluJo SINE Alu 1 305 -7 189 0 0 0 chr5 160678168 160678189 -42407343 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 1453 117 9 0 chr5 160679311 160679525 -42406007 + MER20 DNA MER1_type 1 216 -3 2432 92 0 0 chr5 160679944 160680250 -42405282 - AluSg SINE Alu -4 306 1 397 266 38 43 chr5 160680445 160680629 -42404903 - L1MC4a LINE L1 -1877 5931 5749 602 249 51 119 chr5 160680918 160681404 -42404128 + L2 LINE L2 2858 3310 -3 263 252 109 61 chr5 160681517 160681664 -42403868 + MIR3 SINE MIR 43 196 -12 1646 188 41 11 chr5 160681687 160682054 -42403478 + L1MB8 LINE L1 5792 6169 -9 247 158 0 0 chr5 160682174 160682212 -42403320 - L2 LINE L2 -20 3293 3256 392 286 168 10 chr5 160682229 160682360 -42403172 + MIR SINE MIR 1 152 -56 2022 120 3 43 chr5 160682871 160683196 -42402336 - AluSx SINE Alu 0 312 1 330 26 0 0 chr5 160683993 160684032 -42401500 + (TG)n Simple_repeat Simple_repeat 2 40 0 1783 111 0 26 chr5 160684154 160684424 -42401108 + AluSc SINE Alu 38 300 -9 234 120 0 0 chr5 160686271 160686321 -42399211 - LTR66 LTR ERVL -163 447 398 334 196 0 0 chr5 160686333 160686389 -42399143 - L1MC4 LINE L1 -1339 6703 6648 317 228 43 33 chr5 160686480 160686572 -42398960 + L1MC4 LINE L1 6612 6704 -1338 649 262 53 39 chr5 160687490 160687696 -42397836 - MIR SINE MIR 0 262 54 270 160 40 0 chr5 160687944 160687994 -42397538 + L2 LINE L2 3217 3268 -4 400 294 46 39 chr5 160688032 160688185 -42397347 - L2 LINE L2 -2 3311 3158 183 267 93 13 chr5 160688242 160688317 -42397215 + L2 LINE L2 2344 2424 -890 280 304 0 65 chr5 160689109 160689201 -42396331 - MIR SINE MIR -91 171 86 619 250 41 6 chr5 160689693 160689865 -42395667 - MIR SINE MIR 0 262 85 2138 87 13 20 chr5 160692996 160693295 -42392237 - AluSg SINE Alu -13 297 1 522 266 69 32 chr5 160693406 160693594 -42391938 - MIR SINE MIR -58 204 10 219 238 7 26 chr5 160694384 160694478 -42391054 + CT-rich Low_complexity Low_complexity 1 152 0 2073 125 0 0 chr5 160694856 160695152 -42390380 + AluSx SINE Alu 1 296 -16 287 310 123 18 chr5 160696113 160696284 -42389248 + MIR SINE MIR 70 258 -4 24 0 0 0 chr5 160696334 160696358 -42389174 + AT_rich Low_complexity Low_complexity 1 24 0 2474 58 0 6 chr5 160696687 160697000 -42388532 - AluY SINE Alu 0 311 1 1724 76 4 8 chr5 160697395 160697632 -42387900 + AluSp SINE Alu 78 313 0 341 333 9 0 chr5 160697656 160697770 -42387762 + L1MDa LINE L1 2456 2570 -3970 1429 236 33 50 chr5 160697786 160697902 -42387630 + L1MDa LINE L1 2608 2724 -3816 2310 65 0 3 chr5 160697902 160698195 -42387337 + AluY SINE Alu 1 292 -19 1429 236 33 50 chr5 160698195 160698621 -42386911 + L1MDa LINE L1 2724 3141 -3399 378 329 99 40 chr5 160698702 160699024 -42386508 + L2 LINE L2 2508 2848 -466 297 221 0 0 chr5 160699109 160699177 -42386355 + CT-rich Low_complexity Low_complexity 2 69 0 743 262 122 93 chr5 160699398 160699962 -42385570 + L2 LINE L2 2708 3272 0 222 305 119 17 chr5 160699985 160700103 -42385429 + L2 LINE L2 3138 3267 -5 447 254 65 70 chr5 160700719 160700904 -42384628 - MER63A DNA MER1_type 0 210 27 439 248 152 8 chr5 160700917 160701042 -42384490 + MIR SINE MIR 38 180 -82 2184 90 0 13 chr5 160701117 160701417 -42384115 - AluSx SINE Alu -16 296 1 1788 128 3 69 chr5 160701515 160701686 -42383846 - AluJo SINE Alu -14 298 156 2296 89 0 0 chr5 160701686 160701989 -42383543 - AluSq SINE Alu -10 303 1 1788 128 3 69 chr5 160701989 160702136 -42383396 - AluJo SINE Alu -156 156 1 1212 220 79 20 chr5 160702563 160702868 -42382664 + MER46C DNA MER2_type 11 333 -5 270 0 0 0 chr5 160703083 160703113 -42382419 + (CA)n Simple_repeat Simple_repeat 2 31 0 311 252 126 10 chr5 160703819 160703922 -42381610 - MIR SINE MIR 0 262 148 220 208 21 0 chr5 160704076 160704124 -42381408 - MIR SINE MIR -117 145 97 344 74 15 20 chr5 160704124 160704191 -42381341 - MADE1 DNA Mariner -34 46 1 450 309 58 9 chr5 160704628 160704848 -42380684 + MIR SINE MIR 27 262 0 2112 105 0 3 chr5 160705990 160706275 -42379257 + AluSg SINE Alu 1 284 -26 1643 163 0 27 chr5 160706924 160707225 -42378307 - AluJo SINE Alu -19 293 1 543 112 83 190 chr5 160707498 160707622 -42377910 + MER96B DNA MER1_type? 231 367 -50 263 28 28 0 chr5 160707622 160707658 -42377874 + (TA)n Simple_repeat Simple_repeat 2 38 0 2195 94 3 0 chr5 160707658 160707955 -42377577 - AluY SINE Alu -13 298 1 543 112 83 190 chr5 160707955 160708034 -42377498 + MER96B DNA MER1_type? 365 413 -4 772 310 84 21 chr5 160708109 160708826 -42376706 + L2 LINE L2 2552 3311 -2 21 0 0 0 chr5 160709520 160709541 -42375991 + AT_rich Low_complexity Low_complexity 1 21 0 2201 80 17 7 chr5 160709543 160709842 -42375690 - AluSx SINE Alu -10 302 1 815 281 116 8 chr5 160709850 160710203 -42375329 + MER113 DNA MER1_type? 128 518 -3 484 242 95 110 chr5 160710598 160710684 -42374848 - L1ME LINE L1 -303 5818 5732 1981 93 0 4 chr5 160710684 160710952 -42374580 - AluSc SINE Alu -15 294 28 484 242 95 110 chr5 160710952 160711145 -42374387 - L1ME LINE L1 -389 5732 5541 2426 48 0 32 chr5 160711663 160711975 -42373557 + AluY SINE Alu 1 302 -9 499 270 113 18 chr5 160712232 160712453 -42373079 + MIR SINE MIR 19 260 -2 829 205 98 62 chr5 160712850 160713094 -42372438 + MIR SINE MIR 5 257 -5 217 294 33 33 chr5 160713459 160713551 -42371981 - MER5B DNA MER1_type -64 114 23 366 303 203 46 chr5 160714223 160714817 -42370715 - L2 LINE L2 0 3272 2574 2238 87 3 3 chr5 160715080 160715379 -42370153 - AluY SINE Alu -12 299 1 224 340 10 41 chr5 160715746 160715843 -42369689 - L2 LINE L2 0 3313 3220 379 244 118 8 chr5 160716151 160716270 -42369262 + L2 LINE L2 3172 3303 -10 5578 149 22 44 chr5 160716270 160717638 -42367894 + L1MA6 LINE L1 4966 6161 -5 392 292 111 59 chr5 160717943 160718231 -42367301 - L2 LINE L2 0 3313 3011 223 333 96 32 chr5 160718574 160718730 -42366802 + L2 LINE L2 3096 3261 -11 329 228 102 0 chr5 160719222 160719349 -42366183 + MER113 DNA MER1_type? 75 214 -307 200 229 98 4 chr5 160719456 160719517 -42366015 - MIR SINE MIR -67 141 87 255 277 31 0 chr5 160719584 160719649 -42365883 - MIR SINE MIR -110 152 86 496 231 50 12 chr5 160721025 160721057 -42364475 + L1ME4a LINE L1 5953 5982 -139 195 42 0 0 chr5 160721057 160721081 -42364451 + (CA)n Simple_repeat Simple_repeat 2 25 0 496 231 50 12 chr5 160721081 160721208 -42364324 + L1ME4a LINE L1 5982 6118 -3 453 253 259 0 chr5 160721535 160721705 -42363827 + MIR SINE MIR 48 261 -1 236 245 0 0 chr5 160722106 160722159 -42363373 + LTR67 LTR ERVL 3 55 -502 461 317 56 6 chr5 160722428 160722608 -42362924 + L2 LINE L2 3124 3312 -1 889 284 13 4 chr5 160723192 160723424 -42362108 + MIR SINE MIR 13 246 -16 2257 90 0 3 chr5 160723659 160723969 -42361563 - AluY SINE Alu -2 309 1 1816 102 75 37 chr5 160723969 160724121 -42361411 - AluSg1 SINE Alu -4 305 160 2047 97 3 7 chr5 160724121 160724411 -42361121 - AluSg SINE Alu -21 289 1 1816 102 75 37 chr5 160724411 160724552 -42360980 - AluSg1 SINE Alu -149 160 1 819 216 100 60 chr5 160724854 160725326 -42360206 + MER34B LTR ERV1 11 519 -23 1563 126 0 59 chr5 160725348 160725557 -42359975 - MER46B DNA MER2_type -2601 130 63 1999 110 0 21 chr5 160725557 160725867 -42359665 + AluSx SINE Alu 1 304 0 1563 126 0 59 chr5 160725867 160725927 -42359605 - MER46B DNA MER2_type -2668 63 1 4003 36 2 2 chr5 160725959 160726429 -42359103 + L1PA7 LINE L1 5684 6153 -1 222 37 0 0 chr5 160726450 160726477 -42359055 + (A)n Simple_repeat Simple_repeat 1 27 0 371 306 133 72 chr5 160726901 160727170 -42358362 - L1ME3 LINE L1 -135 6029 5733 2405 54 0 3 chr5 160727170 160727467 -42358065 - AluY SINE Alu -15 296 1 371 306 133 72 chr5 160727467 160727544 -42357988 - L1ME3 LINE L1 -431 5733 5662 292 81 0 0 chr5 160727707 160727744 -42357788 + U2 snRNA snRNA 1 37 -151 576 269 0 28 chr5 160727747 160727892 -42357640 + MER5A DNA MER1_type 49 189 0 194 146 49 24 chr5 160727966 160728007 -42357525 - L2 LINE L2 -17 3255 3214 746 289 46 8 chr5 160728109 160728348 -42357184 + MIR SINE MIR 8 255 -7 274 243 121 100 chr5 160729001 160729105 -42356427 + MIR SINE MIR 7 107 -155 2663 171 38 11 chr5 160729105 160729632 -42355900 - L1MC1 LINE L1 -7 6326 5786 274 243 121 100 chr5 160729632 160729766 -42355766 + MIR SINE MIR 107 250 -12 * 656 339 27 5 chr5 160729716 160729940 -42355592 - MIR SINE MIR -1 261 33 316 213 157 37 chr5 160731061 160731169 -42354363 - MIR SINE MIR -39 223 103 368 328 76 54 chr5 160731187 160731556 -42353976 + L2 LINE L2 2804 3180 -92 2164 103 0 0 chr5 160731572 160731862 -42353670 + AluSc SINE Alu 1 290 -19 209 403 0 0 chr5 160731895 160731967 -42353565 + L2 LINE L2 3104 3175 -97 265 304 25 0 chr5 160733079 160733158 -42352374 + L2 LINE L2 3188 3268 -4 425 295 197 11 chr5 160734263 160734619 -42350913 + L1ME4a LINE L1 5605 6026 -95 2302 93 3 3 chr5 160734665 160734978 -42350554 - AluSq SINE Alu 0 313 1 206 333 187 18 chr5 160735568 160736237 -42349295 + L2 LINE L2 2037 2818 -496 289 286 76 145 chr5 160736248 160736552 -42348980 - L2 LINE L2 -1 3271 2989 182 250 288 0 chr5 160736611 160736691 -42348841 + L2 LINE L2 3153 3255 -17 26 64 0 0 chr5 160736911 160736958 -42348574 + AT_rich Low_complexity Low_complexity 1 47 0 2235 80 21 0 chr5 160736992 160737281 -42348251 - AluSc SINE Alu -14 295 1 300 229 110 25 chr5 160737407 160737525 -42348007 + MIR SINE MIR 106 233 -29 320 217 33 0 chr5 160738891 160738951 -42346581 - L2 LINE L2 -3 3269 3208 3690 151 88 41 chr5 160738994 160739488 -42346044 + L1MB7 LINE L1 5380 5924 -260 2178 75 31 0 chr5 160739488 160739782 -42345750 + AluY SINE Alu 1 303 -8 3690 151 88 41 chr5 160739782 160740047 -42345485 + L1MB7 LINE L1 5924 6175 -9 583 263 7 15 chr5 160740205 160740342 -42345190 + L2 LINE L2 3178 3313 0 226 211 289 11 chr5 160740402 160740492 -42345040 - L2 LINE L2 0 3272 3158 1545 176 14 10 chr5 160740593 160740883 -42344649 - AluJo SINE Alu -20 292 2 183 80 0 0 chr5 160741006 160741031 -42344501 + (A)n Simple_repeat Simple_repeat 1 25 0 288 186 0 17 chr5 160742253 160742312 -42343220 + HsTC2 DNA Tc2 3 60 -1838 327 250 25 0 chr5 160742316 160742396 -42343136 + HsTC2 DNA Tc2 1817 1898 0 771 241 73 22 chr5 160742512 160742744 -42342788 + MIR SINE MIR 12 255 -7 693 162 9 0 chr5 160742840 160742951 -42342581 + FLAM_A SINE Alu 22 133 -9 369 0 0 0 chr5 160744040 160744081 -42341451 + (CA)n Simple_repeat Simple_repeat 2 42 0 1247 176 108 36 chr5 160744430 160744757 -42340775 + AluJo SINE Alu 15 361 0 2122 106 0 13 chr5 160744760 160745063 -42340469 + AluSg SINE Alu 1 299 -11 2515 49 0 0 chr5 160745065 160745373 -42340159 + AluY SINE Alu 1 308 -3 337 264 72 78 chr5 160746360 160746527 -42339005 + MIR SINE MIR 97 262 0 214 268 16 98 chr5 160746859 160746982 -42338550 - L2 LINE L2 -476 2838 2726 250 274 189 9 chr5 160747094 160747200 -42338332 + L2 LINE L2 3140 3264 -8 332 346 102 32 chr5 160747801 160748398 -42337134 + L2 LINE L2 2622 3254 -18 516 304 141 14 chr5 160749513 160749733 -42335799 - MIR SINE MIR -1 261 14 361 216 110 155 chr5 160749824 160750069 -42335463 + L1ME4a LINE L1 5886 6119 -2 194 189 0 94 chr5 160750103 160750156 -42335376 - L2 LINE L2 -5 3308 3261 2215 102 0 0 chr5 160750261 160750565 -42334967 - AluSx SINE Alu -8 304 1 349 246 152 64 chr5 160750599 160750817 -42334715 + MIR SINE MIR 17 262 0 401 292 88 80 chr5 160751402 160752012 -42333520 + L2 LINE L2 2569 3185 -128 224 316 136 48 chr5 160753337 160753543 -42331989 - MIR SINE MIR -38 224 1 307 264 0 107 chr5 160754018 160754139 -42331393 - MIR SINE MIR 0 262 155 720 267 82 0 chr5 160754155 160754361 -42331171 - MIR SINE MIR -33 229 7 231 114 0 0 chr5 160754660 160754704 -42330828 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 893 294 109 22 chr5 160755474 160755886 -42329646 - L2 LINE L2 -2 3311 2864 621 307 111 32 chr5 160756867 160757350 -42328182 + L2 LINE L2 2742 3271 -1 255 245 20 41 chr5 160757381 160757479 -42328053 + CT-rich Low_complexity Low_complexity 4 99 0 1695 136 81 106 chr5 160757605 160758001 -42327531 - MLT1B LTR MaLR -4 386 1 484 199 166 100 chr5 160758208 160758449 -42327083 + MIR SINE MIR 6 262 0 525 300 28 11 chr5 160758595 160758775 -42326757 + MER5A DNA MER1_type 7 189 0 707 263 99 22 chr5 160759444 160759676 -42325856 + MIR SINE MIR 5 254 -8 2086 123 7 0 chr5 160759834 160760144 -42325388 - AluSq SINE Alu -1 312 1 562 231 218 14 chr5 160760184 160760400 -42325132 - MIR SINE MIR 0 262 3 3323 129 35 29 chr5 160761040 160761305 -42324227 + MER41C LTR ERV1 1 263 -291 2199 95 20 0 chr5 160761305 160761610 -42323922 + AluSp SINE Alu 1 311 -2 3323 129 35 29 chr5 160761610 160761895 -42323637 + MER41C LTR ERV1 263 554 0 323 23 23 0 chr5 160763622 160763666 -42321866 + (CA)n Simple_repeat Simple_repeat 2 46 0 246 218 0 0 chr5 160764405 160764460 -42321072 + (TG)n Simple_repeat Simple_repeat 1 55 0 189 0 0 0 chr5 160764875 160764896 -42320636 + (TG)n Simple_repeat Simple_repeat 1 21 0 225 65 0 0 chr5 160765845 160765876 -42319656 + (CA)n Simple_repeat Simple_repeat 2 32 0 2353 52 3 13 chr5 160767455 160767761 -42317771 - AluY SINE Alu -8 303 1 23 0 0 0 chr5 160767773 160767796 -42317736 + AT_rich Low_complexity Low_complexity 1 23 0 2417 37 0 55 chr5 160767800 160768125 -42317407 + AluY SINE Alu 1 307 -4 956 250 129 77 chr5 160768380 160768899 -42316633 + L2 LINE L2 2584 3074 -239 2139 88 0 3 chr5 160768899 160769251 -42316281 + AluSx SINE Alu 1 351 0 956 250 129 77 chr5 160769251 160769354 -42316178 + L2 LINE L2 3074 3170 -143 1092 181 0 31 chr5 160769354 160769547 -42315985 - MER5A DNA MER1_type 0 189 3 956 250 129 77 chr5 160769547 160769608 -42315924 + L2 LINE L2 3170 3313 0 1815 152 0 20 chr5 160769809 160770105 -42315427 + AluJb SINE Alu 1 290 -22 489 62 0 0 chr5 160770421 160770486 -42315046 + (CA)n Simple_repeat Simple_repeat 2 66 0 324 0 0 0 chr5 160770584 160770620 -42314912 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1743 71 0 4 chr5 160771045 160771271 -42314261 - AluSg/x SINE Alu -6 306 82 2694 167 60 2 chr5 160771274 160771790 -42313742 - L1MB8 LINE L1 0 6178 5633 533 52 13 0 chr5 160771822 160771899 -42313633 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 214 286 7 101 chr5 160771961 160772133 -42313399 + MIR SINE MIR 35 187 -61 606 289 13 0 chr5 160772825 160772981 -42312551 + MIR SINE MIR 47 204 -58 2202 107 0 22 chr5 160773053 160773371 -42312161 + AluSx SINE Alu 1 311 -1 922 308 54 22 chr5 160774064 160774565 -42310967 + MLT1K LTR MaLR 2 588 0 296 323 151 26 chr5 160776440 160776672 -42308860 - MIR SINE MIR -1 261 1 641 239 161 39 chr5 160777063 160777368 -42308164 + Charlie2 DNA MER1_type 14 355 -2427 310 192 67 88 chr5 160777459 160777499 -42308033 + Charlie2 DNA MER1_type 2655 2694 -168 2089 115 10 0 chr5 160777499 160777795 -42307737 - AluSx SINE Alu -13 299 1 310 192 67 88 chr5 160777795 160777947 -42307585 + Charlie2 DNA MER1_type 2694 2843 -19 396 256 0 12 chr5 160778019 160778105 -42307427 - L2 LINE L2 0 3313 3229 4064 69 107 0 chr5 160778238 160778789 -42306743 - LTR66 LTR ERVL 0 610 1 981 107 0 7 chr5 160779059 160779208 -42306324 - AluSg/x SINE Alu -9 303 156 222 239 0 0 chr5 160779208 160779254 -42306278 + L2 LINE L2 3268 3313 0 1145 101 24 18 chr5 160779271 160779440 -42306092 - AluSq SINE Alu -143 170 1 1177 175 33 0 chr5 160779502 160779713 -42305819 + MER20 DNA MER1_type 1 218 -1 335 233 0 0 chr5 160779779 160779839 -42305693 - L2 LINE L2 0 3313 3254 412 252 115 11 chr5 160779974 160780181 -42305351 + L1MC4a LINE L1 5653 5819 -302 2294 81 0 16 chr5 160780298 160780608 -42304924 - AluY SINE Alu -6 305 1 734 281 154 34 chr5 160781050 160781374 -42304158 - MLT1I LTR MaLR -28 381 19 923 261 154 35 chr5 160781463 160783136 -42302396 - L1M4c LINE L1 -3622 2760 782 828 254 0 22 chr5 160783194 160783375 -42302157 + MER8 DNA MER2_type 1 177 -62 2250 93 13 0 chr5 160783390 160783702 -42301830 + Tigger1 DNA MER2_type 727 1042 -1376 386 115 16 41 chr5 160783711 160783738 -42301794 - Tigger2 DNA MER2_type -379 55 29 2209 87 7 10 chr5 160783738 160784038 -42301494 + AluSq SINE Alu 1 299 -14 386 115 16 41 chr5 160784038 160784092 -42301440 - Tigger2 DNA MER2_type -405 29 1 688 170 69 101 chr5 160784228 160784416 -42301116 - AluJo SINE Alu -7 305 124 1803 99 6 108 chr5 160784556 160784889 -42300643 - AluSq SINE Alu -14 299 1 11809 125 11 13 chr5 160785138 160786314 -42299218 + Tigger1 DNA MER2_type 1 1173 -1245 1813 150 3 7 chr5 160786314 160786608 -42298924 + AluJb SINE Alu 1 293 -19 11809 125 11 13 chr5 160786608 160787209 -42298323 + Tigger1 DNA MER2_type 1173 1774 -644 566 68 0 0 chr5 160787209 160787282 -42298250 + MLT2A2 LTR ERVL 1 73 -380 1124 124 24 0 chr5 160787290 160787459 -42298073 + MLT2A2 LTR ERVL 281 453 0 4092 137 25 2 chr5 160787459 160788093 -42297439 + Tigger1 DNA MER2_type 1770 2418 0 456 223 80 74 chr5 160788175 160788350 -42297182 - Charlie8 DNA MER1_type -2218 199 24 1449 215 3 7 chr5 160788510 160788817 -42296715 - AluJo SINE Alu -6 306 1 1422 111 128 4 chr5 160788961 160789195 -42296337 - THE1C LTR MaLR 0 375 113 3293 76 46 195 chr5 160789195 160789909 -42295623 + LTR66 LTR ERVL 1 608 -2 1003 51 0 0 chr5 160789911 160790028 -42295504 - THE1C LTR MaLR -258 117 1 906 186 0 11 chr5 160790266 160790443 -42295089 + FRAM SINE Alu 1 175 -1 2842 138 33 12 chr5 160791543 160792028 -42293504 - L1MB3 LINE L1 0 6183 5689 253 157 0 0 chr5 160792871 160792922 -42292610 - LTR66 LTR ERVL -166 444 394 231 194 0 82 chr5 160792926 160793024 -42292508 + L1MC4 LINE L1 6614 6703 -1339 189 171 0 0 chr5 160793024 160793059 -42292473 + (CATATA)n Simple_repeat Simple_repeat 6 40 0 784 290 33 8 chr5 160793112 160793357 -42292175 + MIR SINE MIR 2 252 -10 378 199 145 38 chr5 160794041 160794172 -42291360 + MER33 DNA MER1_type 35 179 -145 1028 171 28 23 chr5 160794355 160794571 -42290961 + MER20 DNA MER1_type 3 219 0 736 254 17 6 chr5 160794660 160794837 -42290695 + MER5A DNA MER1_type 11 189 0 845 192 0 47 chr5 160795669 160795862 -42289670 + MER5A DNA MER1_type 5 188 -1 631 254 66 52 chr5 160796947 160797219 -42288313 - MER102a DNA MER1_type -2 328 53 677 264 85 14 chr5 160797386 160797598 -42287934 - MIR SINE MIR -31 231 5 407 323 86 11 chr5 160798303 160798489 -42287043 + MIR SINE MIR 63 262 0 281 305 125 8 chr5 160799336 160799464 -42286068 - MER5A DNA MER1_type 0 189 47 * 389 235 20 115 chr5 160799456 160799575 -42285957 + MER5A DNA MER1_type 9 103 -86 2052 92 7 7 chr5 160799575 160799856 -42285676 - AluSq SINE Alu -32 281 1 389 235 20 115 chr5 160799856 160799936 -42285596 + MER5A DNA MER1_type 103 189 0 2055 119 7 0 chr5 160800322 160800616 -42284916 - AluSx SINE Alu -16 296 1 962 204 0 0 chr5 160801092 160801268 -42284264 - FRAM SINE Alu 0 176 1 24 0 0 0 chr5 160801452 160801476 -42284056 + AT_rich Low_complexity Low_complexity 1 24 0 1747 144 0 18 chr5 160801515 160801793 -42283739 + AluJb SINE Alu 14 286 -26 1954 138 0 0 chr5 160801937 160802255 -42283277 - AluSx SINE Alu 0 318 1 1821 254 65 62 chr5 160802337 160802973 -42282559 - L2 LINE L2 -2 3311 2673 1926 163 28 53 chr5 160802973 160803372 -42282160 - MLT1B LTR MaLR -1 389 1 1821 254 65 62 chr5 160803372 160803799 -42281733 - L2 LINE L2 -640 2673 2249 5080 151 28 13 chr5 160803838 160804859 -42280673 - L1MB7 LINE L1 0 6184 5147 531 243 5 119 chr5 160804862 160804961 -42280571 - L2 LINE L2 -1066 2248 2182 2189 116 3 0 chr5 160804961 160805272 -42280260 + AluSx SINE Alu 1 312 0 531 243 5 119 chr5 160805272 160805374 -42280158 - L2 LINE L2 -1132 2182 2070 1079 288 26 58 chr5 160805567 160806019 -42279513 - LTR16B LTR ERVL -26 438 1 990 311 43 17 chr5 160806193 160806745 -42278787 - MERVL LTR ERVL -201 5284 4717 801 342 33 19 chr5 160806771 160807139 -42278393 - MERVL LTR ERVL -1104 4660 4288 2211 127 23 48 chr5 160807139 160807533 -42277999 - MLT1B LTR MaLR 0 390 7 414 280 80 38 chr5 160807533 160807764 -42277768 + ERVL LTR ERVL 3358 3564 -1921 * 520 294 0 39 chr5 160807749 160807929 -42277603 - MERVL LTR ERVL -1459 4305 4133 758 295 124 23 chr5 160807946 160808332 -42277200 - MERVL LTR ERVL -1237 3759 3315 536 88 62 0 chr5 160808332 160808412 -42277120 + L1PA11 LINE L1 6089 6173 -1 758 295 124 23 chr5 160808412 160808500 -42277032 - MERVL LTR ERVL -1681 3315 3237 715 310 27 15 chr5 160808475 160808736 -42276796 - HERV16 LTR ERVL -2148 3506 3243 * 3028 317 55 20 chr5 160808768 160809930 -42275602 - HERV16 LTR ERVL -2067 2929 1603 2088 116 0 3 chr5 160809930 160810231 -42275301 - AluSx SINE Alu -12 300 1 3028 317 55 20 chr5 160810231 160810797 -42274735 - HERV16 LTR ERVL -3393 1603 1058 1709 198 47 97 chr5 160810797 160811367 -42274165 - MLT1F LTR MaLR 0 542 1 584 307 98 11 chr5 160811371 160811635 -42273897 - HERV16 LTR ERVL -3939 1057 771 2164 110 0 0 chr5 160812089 160812398 -42273134 + AluSc SINE Alu 1 309 0 599 330 36 14 chr5 160812430 160812709 -42272823 - HERV16 LTR ERVL -4701 295 11 1078 246 195 3 chr5 160812709 160813063 -42272469 - LTR16B LTR ERVL 0 464 43 250 26 51 0 chr5 160814446 160814485 -42271047 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 197 290 65 32 chr5 160814487 160814580 -42270952 + MIR SINE MIR 158 253 -9 186 43 0 0 chr5 160815289 160815312 -42270220 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 617 285 151 58 chr5 160815321 160815807 -42269725 - L2 LINE L2 -32 3281 2842 1861 146 7 0 chr5 160815807 160816108 -42269424 - AluJb SINE Alu -5 307 5 617 285 151 58 chr5 160816108 160816125 -42269407 - L2 LINE L2 -471 2842 2828 5398 78 3 0 chr5 160816125 160816829 -42268703 - L1PB1 LINE L1 0 6151 5446 617 285 151 58 chr5 160816829 160816974 -42268558 - L2 LINE L2 -485 2828 2567 2650 179 10 79 chr5 160817292 160817885 -42267647 + MLT2B3 LTR ERVL 1 552 -2 587 273 127 18 chr5 160818050 160818270 -42267262 - MIR SINE MIR -4 258 15 194 333 0 50 chr5 160819295 160819355 -42266177 + L2 LINE L2 3246 3302 -11 290 222 89 103 chr5 160819398 160819478 -42266054 + MER113 DNA MER1_type? 1 81 -440 1897 141 0 26 chr5 160819478 160819790 -42265742 - AluSx SINE Alu -8 304 1 290 222 89 103 chr5 160819790 160819912 -42265620 + MER113 DNA MER1_type? 81 200 -321 1057 252 126 7 chr5 160820152 160820454 -42265078 + LTR16C LTR ERVL 154 491 0 1737 188 10 0 chr5 160820846 160820967 -42264565 + AluJo SINE Alu 1 119 -193 197 32 0 32 chr5 160820967 160820998 -42264534 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1737 188 10 0 chr5 160820998 160821179 -42264353 + AluJo SINE Alu 119 306 -6 327 323 87 0 chr5 160821232 160821359 -42264173 - L2 LINE L2 -218 3054 2917 390 229 31 10 chr5 160822160 160822256 -42263276 + MIR SINE MIR 66 163 -99 2608 146 27 115 chr5 160822263 160822811 -42262721 + MLT2B2 LTR ERVL 16 515 0 267 235 212 0 chr5 160822811 160822896 -42262636 + MIR SINE MIR 159 261 -1 23 0 0 0 chr5 160822934 160822957 -42262575 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 160823089 160823110 -42262422 + AT_rich Low_complexity Low_complexity 1 21 0 504 151 49 26 chr5 160823531 160823640 -42261892 - MLT1I LTR MaLR -7 428 305 287 356 199 16 chr5 160824349 160824540 -42260992 - MIR SINE MIR -6 256 31 466 282 99 14 chr5 160825154 160825296 -42260236 - L2 LINE L2 0 3272 3119 655 223 40 7 chr5 160825470 160825618 -42259914 + MIR SINE MIR 100 252 -10 1561 134 16 4 chr5 160826051 160826305 -42259227 + AluSp SINE Alu 31 287 -26 1877 113 7 30 chr5 160826427 160826847 -42258685 - AluSq SINE Alu 0 413 1 1884 110 3 23 chr5 160826871 160827172 -42258360 - AluSg SINE Alu -11 299 5 383 191 170 0 chr5 160827200 160827294 -42258238 - AluSg/x SINE Alu 0 302 193 204 237 51 17 chr5 160827409 160827468 -42258064 - MIR SINE MIR -93 169 109 355 289 71 49 chr5 160827722 160827947 -42257585 + MIR SINE MIR 33 262 0 489 92 26 13 chr5 160828536 160828612 -42256920 + Alu SINE Alu 205 281 -30 1706 125 7 24 chr5 160828626 160828923 -42256609 + AluSp SINE Alu 1 292 -21 667 132 7 52 chr5 160828968 160829104 -42256428 + AluSq/x SINE Alu 3 132 -180 2230 85 0 3 chr5 160829136 160829431 -42256101 + AluY SINE Alu 1 294 -17 2045 124 7 0 chr5 160829440 160829746 -42255786 + AluSx SINE Alu 1 308 -4 402 261 37 25 chr5 160829767 160829928 -42255604 + Charlie1 DNA MER1_type 2577 2739 -22 209 244 308 0 chr5 160830028 160830106 -42255426 - L3 LINE CR1 -310 1267 1166 721 162 0 34 chr5 160830216 160830395 -42255137 + CT-rich Low_complexity Low_complexity 3 175 0 1864 144 13 3 chr5 160830400 160830705 -42254827 - AluSx SINE Alu -4 308 1 238 226 245 0 chr5 160831271 160831377 -42254155 + AluJb SINE Alu 164 295 -7 356 229 68 34 chr5 160831417 160831535 -42253997 + MIR SINE MIR 86 207 -55 405 156 16 0 chr5 160831643 160831707 -42253825 - AluS SINE Alu -238 65 1 2097 127 0 3 chr5 161032586 161032870 -42052662 + AluSx SINE Alu 1 283 -29 2048 119 27 7 chr5 161032899 161033192 -42052340 + AluSx SINE Alu 1 299 -13 2563 53 20 0 chr5 161033192 161033495 -42052037 + AluY SINE Alu 1 309 -2 367 297 55 21 chr5 161034368 161034513 -42051019 + MIR SINE MIR 1 150 -112 319 278 86 39 chr5 161035031 161035286 -42050246 + L1ME4a LINE L1 5851 6117 -4 4133 176 49 43 chr5 161035713 161036998 -42048534 - L1MB1 LINE L1 -2 6166 4879 23 0 0 0 chr5 161037215 161037238 -42048294 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr5 161037638 161037678 -42047854 + AT_rich Low_complexity Low_complexity 1 40 0 1188 283 152 7 chr5 161037686 161038139 -42047393 - LTR33 LTR ERVL 0 521 3 471 352 70 18 chr5 161038247 161038645 -42046887 - L3 LINE CR1 -591 986 568 514 152 9 62 chr5 161038647 161038759 -42046773 - MLT1I LTR MaLR 0 409 304 232 322 74 41 chr5 161039009 161039076 -42046456 - MIR SINE MIR -87 175 101 2351 97 0 0 chr5 161039076 161039375 -42046157 + AluY SINE Alu 1 299 -12 232 322 74 41 chr5 161039375 161039428 -42046104 - MIR SINE MIR -161 101 51 717 139 49 0 chr5 161039593 161039715 -42045817 - AluJb SINE Alu -183 129 2 2579 44 3 0 chr5 161039963 161040260 -42045272 - AluY SINE Alu -13 298 1 953 161 0 34 chr5 161040909 161041058 -42044474 + FAM SINE Alu 1 144 -41 331 275 145 38 chr5 161041059 161041351 -42044181 - MLT1K LTR MaLR 0 588 209 1035 123 108 25 chr5 161041649 161041853 -42043679 - AluJo SINE Alu -7 305 85 361 135 250 0 chr5 161041859 161042007 -42043525 - AluSq SINE Alu -61 242 58 332 340 49 7 chr5 161043388 161043532 -42042000 + MIR SINE MIR 16 165 -97 2287 100 0 10 chr5 161043656 161043957 -42041575 + AluSq SINE Alu 1 298 -15 660 153 83 0 chr5 161043996 161044140 -42041392 + L1MD2 LINE L1 6202 6357 -2 825 210 127 4 chr5 161044583 161044812 -42040720 + MIR SINE MIR 3 259 -3 231 283 117 35 chr5 161044824 161044969 -42040563 + L1ME4a LINE L1 5939 6095 -26 1109 213 5 5 chr5 161045270 161045486 -42040046 - L1PA13 LINE L1 -6276 511 296 24 0 0 0 chr5 161046120 161046144 -42039388 + AT_rich Low_complexity Low_complexity 1 24 0 1023 204 0 0 chr5 161046328 161046504 -42039028 + FRAM SINE Alu 1 176 0 2035 127 0 0 chr5 161046981 161047256 -42038276 + AluSx SINE Alu 1 275 -37 1850 188 10 0 chr5 161047584 161047705 -42037827 + AluJo SINE Alu 1 119 -193 197 32 0 32 chr5 161047705 161047736 -42037796 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1850 188 10 0 chr5 161047736 161047917 -42037615 + AluJo SINE Alu 119 306 -6 294 318 45 9 chr5 161047969 161048079 -42037453 - L2 LINE L2 -257 3056 2943 348 229 31 10 chr5 161048898 161048994 -42036538 + MIR SINE MIR 66 163 -99 1188 168 55 0 chr5 161049001 161049203 -42036329 + MLT2B2 LTR ERVL 16 228 -287 280 316 134 45 chr5 161049368 161049615 -42035917 + L2 LINE L2 3013 3281 -32 186 43 0 0 chr5 161049624 161049647 -42035885 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 250 26 51 0 chr5 161050451 161050490 -42035042 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 1223 166 0 32 chr5 161051609 161051826 -42033706 + AluJb SINE Alu 77 286 -26 2076 138 0 0 chr5 161051970 161052288 -42033244 - AluSx SINE Alu 0 318 1 1561 252 65 62 chr5 161052388 161053006 -42032526 - L2 LINE L2 -19 3294 2673 1897 168 28 53 chr5 161053006 161053405 -42032127 - MLT1B LTR MaLR -1 389 1 1561 252 65 62 chr5 161053405 161053832 -42031700 - L2 LINE L2 -640 2673 2249 3346 148 38 14 chr5 161053871 161054498 -42031034 - L1MB7 LINE L1 0 6184 5543 2620 192 8 74 chr5 161054763 161055356 -42030176 + MLT2B3 LTR ERVL 1 554 0 226 234 195 0 chr5 161055356 161055433 -42030099 + MIR SINE MIR 159 250 -12 23 0 0 0 chr5 161055479 161055502 -42030030 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 161055634 161055655 -42029877 + AT_rich Low_complexity Low_complexity 1 21 0 506 150 49 26 chr5 161056076 161056185 -42029347 - MLT1I LTR MaLR -7 428 305 230 355 11 18 chr5 161056897 161057081 -42028451 - MIR SINE MIR -9 253 36 1968 139 7 0 chr5 161058027 161058357 -42027175 + AluJb SINE Alu 1 332 0 358 183 29 39 chr5 161058518 161058622 -42026910 + HAL1 LINE L1 2131 2233 -274 1055 246 195 3 chr5 161058908 161059262 -42026270 + LTR16B LTR ERVL 43 464 0 573 330 36 14 chr5 161059262 161059541 -42025991 + HERV16 LTR ERVL 11 295 -4701 2288 108 0 0 chr5 161059576 161059882 -42025650 - AluSc SINE Alu -3 306 1 533 297 109 13 chr5 161060336 161060575 -42024957 + HERV16 LTR ERVL 771 1032 -3964 1335 183 122 11 chr5 161060754 161061033 -42024499 + MER58B DNA MER1_type 28 337 -4 202 301 38 53 chr5 161061036 161061169 -42024363 - L2 LINE L2 -20 3293 3163 1568 114 81 8 chr5 161061214 161061450 -42024082 - AluSx SINE Alu -11 301 49 2475 82 0 3 chr5 161061819 161062125 -42023407 - AluSq SINE Alu -8 305 1 1929 164 0 0 chr5 161062125 161062412 -42023120 - AluSx SINE Alu -13 299 13 2046 136 0 13 chr5 161062526 161062834 -42022698 - AluJo SINE Alu -8 304 1 2353 164 70 5 chr5 161063129 161063557 -42021975 - MLT1D LTR MaLR -47 458 3 2371 274 98 40 chr5 161063567 161065060 -42020472 - L2 LINE L2 -178 3135 1563 385 222 106 44 chr5 161065111 161065291 -42020241 - L2 LINE L2 -2075 1239 1049 248 260 0 60 chr5 161065426 161065526 -42020006 + MER5A DNA MER1_type 45 138 -51 22 35 0 0 chr5 161066523 161066552 -42018980 + AT_rich Low_complexity Low_complexity 1 29 0 260 283 70 52 chr5 161067103 161067375 -42018157 + L1ME4a LINE L1 5768 6044 -77 344 241 152 51 chr5 161068202 161068360 -42017172 - MIR SINE MIR -19 243 70 1050 198 21 8 chr5 161070210 161070448 -42015084 - L1M4 LINE L1 -759 5387 5147 479 245 5 110 chr5 161070451 161070550 -42014982 - L2 LINE L2 -1066 2248 2179 2263 115 3 10 chr5 161070550 161070863 -42014669 + AluSx SINE Alu 1 311 -1 479 245 5 110 chr5 161070863 161070963 -42014569 - L2 LINE L2 -1135 2179 2070 1054 288 26 58 chr5 161071156 161071608 -42013924 - LTR16B LTR ERVL -26 438 1 960 307 44 19 chr5 161071782 161072334 -42013198 - MERVL LTR ERVL -201 5284 4717 782 342 33 19 chr5 161072360 161072728 -42012804 - MERVL LTR ERVL -1104 4660 4288 2210 124 23 48 chr5 161072728 161073122 -42012410 - MLT1B LTR MaLR 0 390 7 411 280 80 38 chr5 161073122 161073353 -42012179 + ERVL LTR ERVL 3358 3564 -1921 * 507 294 0 39 chr5 161073338 161073518 -42012014 - MERVL LTR ERVL -1459 4305 4133 712 294 122 23 chr5 161073535 161073922 -42011610 - MERVL LTR ERVL -1237 3759 3315 538 88 62 0 chr5 161073922 161074002 -42011530 + L1PA11 LINE L1 6089 6173 -1 712 294 122 23 chr5 161074002 161074090 -42011442 - MERVL LTR ERVL -1681 3315 3237 706 310 27 15 chr5 161074065 161074326 -42011206 - HERV16 LTR ERVL -2148 3506 3243 * 3008 317 55 21 chr5 161074358 161075520 -42010012 - HERV16 LTR ERVL -2067 2929 1603 2213 116 0 3 chr5 161075520 161075821 -42009711 - AluSx SINE Alu -12 300 1 3008 317 55 21 chr5 161075821 161076387 -42009145 - HERV16 LTR ERVL -3393 1603 1058 1700 198 47 97 chr5 161076387 161076957 -42008575 - MLT1F LTR MaLR 0 542 1 415 282 99 14 chr5 161077414 161077556 -42007976 - L2 LINE L2 0 3272 3119 581 223 40 7 chr5 161077730 161077878 -42007654 + MIR SINE MIR 100 252 -10 504 183 16 40 chr5 161078477 161078603 -42006929 - LTR67 LTR ERVL -3 554 432 304 259 224 20 chr5 161079101 161079248 -42006284 - MER5B DNA MER1_type 0 178 2 2403 166 39 5 chr5 161079317 161079727 -42005805 + MSTB1 LTR MaLR 1 424 -8 300 272 44 9 chr5 161080203 161080317 -42005215 + L2 LINE L2 2944 3061 -252 966 205 41 0 chr5 161080380 161080551 -42004981 + MER45A DNA AcHobo 1 178 0 216 97 0 0 chr5 161080742 161080773 -42004759 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 245 194 113 0 chr5 161081129 161081182 -42004350 + MLT1L LTR MaLR 505 564 -51 2096 252 58 8 chr5 161081182 161081701 -42003831 - MLT1H1 LTR MaLR -2 553 9 1460 198 44 41 chr5 161081837 161082176 -42003356 - MER58B DNA MER1_type 0 341 2 907 300 39 37 chr5 161082177 161082375 -42003157 + L2 LINE L2 2901 3097 -216 2307 114 0 0 chr5 161082375 161082681 -42002851 - AluSx SINE Alu -6 306 1 907 300 39 37 chr5 161082681 161082892 -42002640 + L2 LINE L2 3097 3311 -2 1204 294 40 52 chr5 161083907 161084427 -42001105 - MLT1K LTR MaLR -62 526 13 180 0 0 0 chr5 161084830 161084850 -42000682 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2222 104 0 0 chr5 161084850 161085128 -42000404 - AluSg SINE Alu -32 278 1 2146 143 0 3 chr5 161085130 161085438 -42000094 - AluJb SINE Alu -5 307 1 180 250 0 0 chr5 161085707 161085755 -41999777 - L2 LINE L2 -9 3263 3216 373 327 142 44 chr5 161086344 161086662 -41998870 + L2 LINE L2 2919 3267 -5 1297 243 92 63 chr5 161087228 161087460 -41998072 - L2 LINE L2 0 3313 3089 291 28 0 0 chr5 161087460 161087496 -41998036 + (TG)n Simple_repeat Simple_repeat 2 37 0 1297 243 92 63 chr5 161087496 161088126 -41997406 - L2 LINE L2 -224 3089 2423 351 314 142 10 chr5 161088718 161088922 -41996610 - MIR SINE MIR -12 250 20 219 356 51 8 chr5 161089000 161089118 -41996414 + MIR3 SINE MIR 86 208 0 1460 182 113 10 chr5 161089529 161089831 -41995701 + MER58B DNA MER1_type 5 337 -4 202 301 38 53 chr5 161089834 161089967 -41995565 - L2 LINE L2 -20 3293 3163 1568 114 81 8 chr5 161090012 161090248 -41995284 - AluSx SINE Alu -11 301 49 2535 73 0 0 chr5 161090617 161090920 -41994612 - AluY SINE Alu -8 303 1 2331 105 3 0 chr5 161091461 161091757 -41993775 - AluSx SINE Alu -11 301 5 336 280 10 0 chr5 161091817 161091917 -41993615 + MER103 DNA DNA 3 103 -63 625 257 84 89 chr5 161092351 161092768 -41992764 - MLT1J LTR MaLR 0 511 201 562 234 160 11 chr5 161092846 161093034 -41992498 + MIR SINE MIR 32 247 -15 580 304 73 5 chr5 161093567 161093771 -41991761 + MIR SINE MIR 37 254 -8 2219 112 0 3 chr5 161093791 161094094 -41991438 - AluSg SINE Alu -8 302 1 428 173 91 0 chr5 161094121 161094229 -41991303 - L1ME2 LINE L1 -5 6161 6029 397 217 79 66 chr5 161094625 161094777 -41990755 + MLT1K LTR MaLR 364 517 -71 2237 105 7 0 chr5 161095354 161095649 -41989883 - AluSx SINE Alu -15 297 1 244 230 177 9 chr5 161095823 161095936 -41989596 + MIR SINE MIR 75 206 -56 1087 150 0 0 chr5 161095939 161096099 -41989433 - AluSg/x SINE Alu -12 300 141 210 299 0 0 chr5 161096106 161096173 -41989359 + MIR SINE MIR 195 261 -1 21 36 0 0 chr5 161096183 161096211 -41989321 + AT_rich Low_complexity Low_complexity 1 28 0 278 224 0 0 chr5 161096319 161096351 -41989181 + MLT1F LTR MaLR 1 32 -563 406 191 52 13 chr5 161096351 161096477 -41989055 + MLT1F LTR MaLR 1 171 -378 1311 201 125 75 chr5 161096477 161096924 -41988608 - MER66A LTR ERV1 0 599 97 498 226 97 67 chr5 161096991 161097333 -41988199 + MLT1F LTR MaLR 149 542 0 688 153 16 32 chr5 161097552 161097676 -41987856 - FLAM_C SINE Alu -17 126 5 210 250 54 0 chr5 161097848 161097904 -41987628 + L2 LINE L2 3184 3242 -30 321 298 8 58 chr5 161098221 161098342 -41987190 - L2 LINE L2 -22 3250 3136 44 35 0 0 chr5 161099367 161099425 -41986107 + GC_rich Low_complexity Low_complexity 1 58 0 205 360 27 0 chr5 161101131 161101206 -41984326 - L2 LINE L2 -5 3267 3191 5916 140 17 47 chr5 161103063 161104136 -41981396 - L1MC2 LINE L1 -3 6341 5299 1802 178 36 3 chr5 161104136 161104496 -41981036 - L1MB4 LINE L1 -7 6173 5802 5916 140 17 47 chr5 161104496 161104515 -41981017 - L1MC2 LINE L1 -1045 5299 5281 805 133 0 30 chr5 161104803 161104938 -41980594 - FLAM_C SINE Alu -12 131 1 3725 185 24 35 chr5 161104938 161105758 -41979774 - L1MB7 LINE L1 -46 6138 5328 1193 284 104 14 chr5 161106366 161106923 -41978609 - L2 LINE L2 -346 2968 2362 586 299 39 35 chr5 161107082 161107420 -41978112 - L1MC4a LINE L1 -1853 5955 5617 198 0 0 0 chr5 161108090 161108112 -41977420 + (TG)n Simple_repeat Simple_repeat 2 23 0 931 278 109 3 chr5 161108780 161109103 -41976429 - L1MC4a LINE L1 -299 5822 5555 2210 96 0 14 chr5 161110387 161110680 -41974852 - AluY SINE Alu -22 289 1 242 318 123 22 chr5 161110766 161111043 -41974489 - L2 LINE L2 -840 2474 2170 693 187 123 7 chr5 161111050 161111205 -41974327 - MER5B DNA MER1_type 0 178 6 793 212 9 51 chr5 161113367 161113584 -41971948 - L1MB8 LINE L1 0 6178 5971 2303 61 0 14 chr5 161113593 161113873 -41971659 - AluY SINE Alu -9 302 27 217 182 36 36 chr5 161114498 161114553 -41970979 + CT-rich Low_complexity Low_complexity 1 55 0 1470 168 30 53 chr5 161114646 161114950 -41970582 - AluJo SINE Alu -15 297 1 1389 199 11 26 chr5 161114974 161115241 -41970291 - AluJo SINE Alu -23 289 27 2305 79 52 0 chr5 161115323 161115613 -41969919 - AluSg SINE Alu -5 305 1 256 198 215 16 chr5 161116372 161116493 -41969039 - L1ME4a LINE L1 -9 6112 5968 290 268 63 24 chr5 161116500 161116627 -41968905 - L1ME4a LINE L1 -257 5864 5733 2285 97 0 23 chr5 161116658 161116966 -41968566 - AluSx SINE Alu -11 301 1 2031 142 32 15 chr5 161117154 161117492 -41968040 - MER2 DNA MER2_type 0 344 1 415 298 96 11 chr5 161117505 161117693 -41967839 - MIR SINE MIR -8 254 51 235 318 71 0 chr5 161117769 161117854 -41967678 + MIR SINE MIR 118 208 -54 518 300 86 15 chr5 161118676 161118943 -41966589 - L2 LINE L2 0 3313 3028 407 313 108 16 chr5 161119134 161119596 -41965936 + L2 LINE L2 2665 3146 -167 1020 59 0 0 chr5 161119749 161119867 -41965665 - AluSc SINE Alu -15 294 177 2068 92 82 0 chr5 161120348 161120629 -41964903 + AluSq SINE Alu 1 304 -9 198 0 0 0 chr5 161121920 161121942 -41963590 + (T)n Simple_repeat Simple_repeat 1 22 0 2191 136 7 0 chr5 161122244 161122553 -41962979 - AluSx SINE Alu -1 311 1 475 271 23 41 chr5 161122629 161122850 -41962682 - MLT1K LTR MaLR -28 560 344 857 196 48 32 chr5 161123624 161123813 -41961719 - MER58C DNA MER1_type 0 215 24 500 217 75 62 chr5 161123817 161123978 -41961554 + MIR SINE MIR 23 185 -77 575 251 184 37 chr5 161124576 161124722 -41960810 + L2 LINE L2 3003 3126 -187 333 0 0 0 chr5 161124722 161124759 -41960773 + (TG)n Simple_repeat Simple_repeat 2 38 0 575 251 184 37 chr5 161124759 161124883 -41960649 + L2 LINE L2 3126 3313 0 544 305 18 0 chr5 161124939 161125103 -41960429 + MIR3 SINE MIR 36 202 -6 187 204 0 23 chr5 161125755 161125799 -41959733 - L2 LINE L2 -557 2757 2715 356 213 311 8 chr5 161126484 161126606 -41958926 - MER5A DNA MER1_type -1 188 30 315 304 158 29 chr5 161126759 161127096 -41958436 + L2 LINE L2 2678 3061 -211 283 297 135 18 chr5 161127964 161128075 -41957457 + L2 LINE L2 3187 3310 -3 1813 198 34 16 chr5 161128213 161128596 -41956936 - MSTD LTR MaLR -3 393 4 213 139 0 0 chr5 161128954 161128997 -41956535 + (TC)n Simple_repeat Simple_repeat 1 43 0 2281 102 26 0 chr5 161129022 161129326 -41956206 - AluSq SINE Alu -1 312 1 1092 189 51 5 chr5 161131066 161131262 -41954270 + MER6B DNA MER2_type 1 205 -5 359 224 0 44 chr5 161131517 161131635 -41953897 + MIR SINE MIR 103 212 -50 466 146 11 11 chr5 161131851 161131940 -41953592 - MER53 DNA DNA -2 187 99 374 235 43 17 chr5 161132606 161132721 -41952811 - MIR SINE MIR -28 234 117 420 156 13 13 chr5 161132811 161132888 -41952644 + MER116 DNA Mariner 2 78 -2 231 146 0 0 chr5 161133052 161133093 -41952439 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 2330 108 0 0 chr5 161133149 161133454 -41952078 - AluSx SINE Alu -5 307 3 1679 200 45 56 chr5 161133490 161133755 -41951777 - L1ME1 LINE L1 -134 6032 5773 2088 135 6 0 chr5 161133755 161134066 -41951466 - AluSq SINE Alu 0 313 1 1679 200 45 56 chr5 161134066 161134246 -41951286 - L1ME1 LINE L1 -393 5773 5592 1529 196 13 17 chr5 161134758 161135059 -41950473 - AluJb SINE Alu -12 300 1 315 0 0 0 chr5 161135139 161135174 -41950358 + (TG)n Simple_repeat Simple_repeat 2 36 0 243 349 53 0 chr5 161135829 161135961 -41949571 - MIR SINE MIR -32 230 92 2440 77 0 0 chr5 161136619 161136930 -41948602 + AluY SINE Alu 1 311 0 209 231 0 0 chr5 161137078 161137117 -41948415 + T-rich Low_complexity Low_complexity 2 40 0 313 231 26 13 chr5 161137887 161137965 -41947567 - L1ME4a LINE L1 -6 6115 6037 285 209 0 0 chr5 161138387 161138454 -41947078 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 441 248 47 47 chr5 161138470 161138599 -41946933 - L2 LINE L2 0 3313 3185 309 258 11 54 chr5 161139787 161139880 -41945652 + MIR SINE MIR 139 227 -35 229 295 95 9 chr5 161140074 161140179 -41945353 + MIR SINE MIR 4 117 -145 * 478 258 8 24 chr5 161140173 161140297 -41945235 - L2 LINE L2 -1 3271 3150 * 493 264 34 34 chr5 161140292 161140440 -41945092 + MIR SINE MIR 112 259 -3 1269 200 3 103 chr5 161140921 161141050 -41944482 - AluJo SINE Alu -4 298 158 1740 119 0 4 chr5 161141050 161141303 -41944229 - AluSx SINE Alu -60 252 1 1269 200 3 103 chr5 161141303 161141503 -41944029 - AluJo SINE Alu -144 158 2 2119 62 0 32 chr5 161141594 161141903 -41943629 - AluY SINE Alu -2 309 11 2122 154 51 0 chr5 161142157 161142528 -41943004 - MLT1B LTR MaLR 0 390 1 923 251 86 21 chr5 161143323 161143566 -41941966 + MIR SINE MIR 2 260 -2 1864 104 0 119 chr5 161143678 161144013 -41941519 - AluSx SINE Alu -7 295 1 501 293 157 45 chr5 161144266 161144467 -41941065 + L2 LINE L2 2839 3016 -297 1555 195 3 10 chr5 161144467 161144769 -41940763 - AluJo SINE Alu -12 300 1 501 293 157 45 chr5 161144769 161144994 -41940538 + L2 LINE L2 3016 3313 0 197 312 85 60 chr5 161145175 161145374 -41940158 - L2 LINE L2 -221 3051 2848 521 261 75 12 chr5 161147226 161147387 -41938145 + MIR SINE MIR 40 210 -52 300 333 105 18 chr5 161148698 161148869 -41936663 - MER5A DNA MER1_type -3 186 1 306 289 141 0 chr5 161149427 161149555 -41935977 - MIR SINE MIR 0 262 117 243 0 0 0 chr5 161149969 161149996 -41935536 + (T)n Simple_repeat Simple_repeat 1 27 0 579 248 150 0 chr5 161150220 161150373 -41935159 + MER5A DNA MER1_type 13 188 -1 247 111 19 19 chr5 161151250 161151304 -41934228 + (TA)n Simple_repeat Simple_repeat 2 55 0 293 318 94 35 chr5 161151420 161151590 -41933942 + L2 LINE L2 3092 3271 -1 410 296 177 16 chr5 161151661 161151847 -41933685 - MIR SINE MIR 0 262 47 186 43 0 0 chr5 161152799 161152822 -41932710 + (TG)n Simple_repeat Simple_repeat 2 24 0 469 241 36 9 chr5 161153803 161153915 -41931617 + MIR SINE MIR 141 255 -7 411 274 8 17 chr5 161154990 161155107 -41930425 - MIR SINE MIR -50 212 97 259 318 24 12 chr5 161156203 161156288 -41929244 + MIR SINE MIR 4 89 -173 609 272 108 22 chr5 161156307 161156539 -41928993 + MIR SINE MIR 11 262 0 288 239 84 0 chr5 161157915 161157986 -41927546 - MER94 DNA DNA -34 100 24 206 256 0 0 chr5 161158571 161158614 -41926918 - MIR SINE MIR -174 88 46 337 318 0 19 chr5 161159664 161159771 -41925761 + MIR SINE MIR 139 243 -19 207 327 127 40 chr5 161159821 161160325 -41925207 + L2 LINE L2 1858 2405 -909 1168 196 136 74 chr5 161160864 161161231 -41924301 + MLT1B LTR MaLR 1 390 0 328 136 76 144 chr5 161161596 161161714 -41923818 - L1ME4a LINE L1 -2 6119 6010 2026 122 6 22 chr5 161161716 161162028 -41923504 - AluSq SINE Alu -6 307 1 531 210 79 87 chr5 161162047 161162299 -41923233 - L1ME4a LINE L1 -281 5840 5591 667 270 46 21 chr5 161162815 161163052 -41922480 - L1ME3A LINE L1 0 6170 5928 904 254 102 47 chr5 161163121 161163575 -41921957 - MLT1H LTR MaLR 0 549 1 196 235 222 12 chr5 161164373 161164454 -41921078 + MIR SINE MIR 160 257 -5 626 239 75 59 chr5 161164477 161164716 -41920816 - MIR SINE MIR 0 262 20 553 306 44 35 chr5 161165434 161165647 -41919885 - MIR SINE MIR -29 233 20 2032 121 7 3 chr5 161166644 161166942 -41918590 + AluSx SINE Alu 1 299 -13 443 306 73 37 chr5 161167111 161167356 -41918176 + MIR SINE MIR 9 262 0 508 323 25 19 chr5 161167436 161167594 -41917938 - MIR3 SINE MIR -31 177 19 334 250 34 115 chr5 161167658 161167806 -41917726 + MER5A DNA MER1_type 43 178 -11 632 318 31 14 chr5 161167945 161168168 -41917364 - MIR SINE MIR -11 251 25 276 30 0 0 chr5 161168557 161168590 -41916942 + (GGGGA)n Simple_repeat Simple_repeat 4 36 0 772 246 35 25 chr5 161168598 161168797 -41916735 - MLT1G1 LTR MaLR -394 201 1 240 303 13 0 chr5 161169156 161169232 -41916300 - L2 LINE L2 -75 3238 3162 435 249 141 32 chr5 161171307 161171492 -41914040 + MIR SINE MIR 46 250 -12 359 280 27 60 chr5 161172121 161172271 -41913261 - MIR SINE MIR 0 262 118 549 309 91 9 chr5 161172489 161172709 -41912823 + MIR SINE MIR 1 238 -24 2109 118 3 0 chr5 161172719 161173016 -41912516 - AluSx SINE Alu -12 300 3 1915 123 34 0 chr5 161173250 161173542 -41911990 + AluSx SINE Alu 1 302 -10 473 267 25 37 chr5 161173904 161174065 -41911467 - MIR SINE MIR -16 246 88 215 192 211 0 chr5 161175582 161175634 -41909898 - MIR SINE MIR -44 218 156 726 272 42 5 chr5 161175701 161175914 -41909618 + MIR SINE MIR 42 262 0 217 311 89 11 chr5 161175928 161176018 -41909514 - MIR SINE MIR -101 161 65 2377 54 3 0 chr5 161176030 161176324 -41909208 - AluSp SINE Alu -18 295 1 266 233 155 19 chr5 161176620 161176723 -41908809 + L2 LINE L2 3197 3313 0 189 26 51 26 chr5 161179099 161179138 -41906394 + (CAA)n Simple_repeat Simple_repeat 2 41 0 540 301 125 0 chr5 161179152 161179368 -41906164 + MIR SINE MIR 3 245 -17 2209 100 3 0 chr5 161179764 161180064 -41905468 - AluSx SINE Alu -11 301 1 1792 170 0 19 chr5 161181840 161182158 -41903374 - AluSx SINE Alu 0 312 1 469 242 258 26 chr5 161182178 161182368 -41903164 + MIR SINE MIR 28 261 -1 225 250 19 0 chr5 161182547 161182599 -41902933 + L2 LINE L2 3261 3313 0 328 279 12 0 chr5 161182765 161182851 -41902681 - L1MA10 LINE L1 -29 6305 6219 469 304 73 14 chr5 161182977 161183197 -41902335 + L2 LINE L2 3078 3310 -3 291 240 67 27 chr5 161184319 161184394 -41901138 - L2 LINE L2 -5 3308 3231 271 236 122 41 chr5 161184472 161184595 -41900937 + L2 LINE L2 3179 3311 -2 1849 203 88 14 chr5 161185200 161185234 -41900298 - MLT1C LTR MaLR 0 467 437 2057 138 55 3 chr5 161185234 161185561 -41899971 - MER2 DNA MER2_type 0 344 1 1849 203 88 14 chr5 161185561 161185944 -41899588 - MLT1C LTR MaLR -30 437 19 330 318 9 27 chr5 161186522 161186632 -41898900 - MER5A DNA MER1_type 0 189 82 267 133 0 0 chr5 161186680 161186725 -41898807 + (GA)n Simple_repeat Simple_repeat 2 46 0 309 141 0 0 chr5 161186728 161186799 -41898733 + (TG)n Simple_repeat Simple_repeat 2 72 0 404 260 133 57 chr5 161187425 161187917 -41897615 - L2 LINE L2 -203 3110 2582 4623 193 58 8 chr5 161188015 161188964 -41896568 - MER45B DNA AcHobo -44 996 1 264 279 127 0 chr5 161189549 161189628 -41895904 - MER5A DNA MER1_type -5 184 96 295 316 44 0 chr5 161190340 161190476 -41895056 - MIR SINE MIR -2 260 119 2318 83 10 3 chr5 161191773 161192073 -41893459 - AluSg SINE Alu -8 302 1 246 158 35 0 chr5 161192228 161192285 -41893247 - L2 LINE L2 0 3272 3214 437 188 256 0 chr5 161192352 161192485 -41893047 + MER5A DNA MER1_type 15 181 -8 366 248 141 8 chr5 161193424 161193545 -41891987 - MIR SINE MIR -74 188 52 256 196 0 0 chr5 161193908 161193959 -41891573 - L2 LINE L2 -2 3311 3261 207 0 0 0 chr5 161194145 161194168 -41891364 + (T)n Simple_repeat Simple_repeat 1 23 0 247 252 50 50 chr5 161194386 161194525 -41891007 + L2 LINE L2 2708 2846 -468 198 103 0 0 chr5 161194690 161194719 -41890813 + (T)n Simple_repeat Simple_repeat 1 29 0 667 256 83 0 chr5 161194954 161195134 -41890398 + MIR SINE MIR 2 196 -66 360 0 0 0 chr5 161195958 161195998 -41889534 + (TG)n Simple_repeat Simple_repeat 2 41 0 767 246 35 25 chr5 161197187 161197386 -41888146 - MLT1G1 LTR MaLR -394 201 1 195 42 0 0 chr5 161197852 161197876 -41887656 + (TCCCC)n Simple_repeat Simple_repeat 4 27 0 549 318 31 14 chr5 161198265 161198488 -41887044 + MIR SINE MIR 25 251 -11 281 267 43 112 chr5 161198627 161198781 -41886751 - MER5A DNA MER1_type -11 178 26 455 323 25 19 chr5 161198839 161198997 -41886535 + MIR3 SINE MIR 19 177 -31 364 285 78 34 chr5 161199077 161199296 -41886236 - MIR SINE MIR 0 262 36 2155 121 7 3 chr5 161199491 161199789 -41885743 - AluSx SINE Alu -13 299 1 477 307 44 35 chr5 161200786 161200999 -41884533 + MIR SINE MIR 20 233 -29 554 234 75 59 chr5 161201717 161201956 -41883576 + MIR SINE MIR 20 262 0 876 254 102 47 chr5 161202858 161203312 -41882220 + MLT1H LTR MaLR 1 549 0 663 270 46 21 chr5 161203381 161203618 -41881914 + L1ME3A LINE L1 5928 6170 0 549 210 79 87 chr5 161204134 161204386 -41881146 + L1ME4a LINE L1 5591 5840 -281 871 122 14 58 chr5 161204405 161204544 -41880988 + AluSq/x SINE Alu 1 133 -180 272 312 87 22 chr5 161205121 161205259 -41880273 - MLT1H LTR MaLR -2 547 401 221 308 0 0 chr5 161205260 161205312 -41880220 + polypyrimidine Low_complexity Low_complexity 4 55 0 988 224 48 24 chr5 161205405 161205655 -41879877 + MIR SINE MIR 7 262 0 491 223 99 0 chr5 161206205 161206326 -41879206 + MER5A DNA MER1_type 57 189 0 550 268 37 0 chr5 161206382 161206546 -41878986 - MIR SINE MIR -34 228 59 232 315 0 0 chr5 161206849 161206938 -41878594 - L1MC4 LINE L1 -1340 6702 6614 268 274 0 32 chr5 161207359 161207454 -41878078 - MIR SINE MIR -43 219 128 1746 182 89 36 chr5 161207547 161207986 -41877546 - MLT1C LTR MaLR 0 467 6 423 276 50 79 chr5 161209731 161210010 -41875522 + L3b LINE CR1 1105 1375 -208 658 253 84 4 chr5 161210302 161210527 -41875005 + MIR SINE MIR 20 262 0 710 296 110 54 chr5 161211504 161211876 -41873656 - LTR16A LTR ERVL -6 444 52 366 333 42 12 chr5 161211899 161212064 -41873468 + MER5A DNA MER1_type 19 188 -1 1889 118 3 93 chr5 161212908 161213240 -41872292 + AluJb SINE Alu 1 302 -10 558 184 57 170 chr5 161214125 161214407 -41871125 - L1MC4 LINE L1 0 8042 7793 479 97 0 28 chr5 161214411 161214483 -41871049 - MADE1 DNA Mariner 0 80 11 364 123 15 31 chr5 161214467 161214532 -41871000 - MADE1 DNA Mariner -16 64 1 * 1894 199 45 99 chr5 161214533 161215401 -41870131 - L1MC4 LINE L1 -264 7778 6927 38 0 0 0 chr5 161216637 161216675 -41868857 + AT_rich Low_complexity Low_complexity 1 38 0 1156 260 91 65 chr5 161216909 161217520 -41868012 - MLT1G1 LTR MaLR 0 590 1 350 264 109 26 chr5 161217651 161218031 -41867501 - L1MEc LINE L1 -4867 1549 1264 194 333 0 0 chr5 161218730 161218808 -41866724 + MIR SINE MIR 164 241 -21 262 261 80 67 chr5 161218910 161219047 -41866485 - MIR3 SINE MIR -49 159 22 2276 105 3 3 chr5 161219190 161219494 -41866038 + AluSx SINE Alu 1 304 -8 440 188 168 0 chr5 161219494 161219595 -41865937 - AluJo/FLAM SINE Alu -184 118 1 232 298 201 41 chr5 161219924 161220234 -41865298 + L2 LINE L2 2715 3085 -187 1911 95 0 50 chr5 161221591 161221874 -41863658 - AluSg SINE Alu -1 309 41 201 277 121 48 chr5 161223118 161223201 -41862331 - MIR SINE MIR -72 136 48 275 278 28 56 chr5 161223219 161223363 -41862169 - MLT1K LTR MaLR -447 141 2 348 292 111 32 chr5 161226250 161226466 -41859066 + Charlie8 DNA MER1_type 1 233 -2184 241 305 53 21 chr5 161227613 161227708 -41857824 + MIR SINE MIR 20 117 -91 204 301 133 0 chr5 161227941 161228024 -41857508 + L2 LINE L2 3159 3252 -20 1847 155 4 7 chr5 161228154 161228431 -41857101 - AluJo SINE Alu -31 281 6 613 234 32 6 chr5 161228699 161228857 -41856675 - MIR SINE MIR -61 201 40 25 0 0 0 chr5 161228858 161228883 -41856649 + AT_rich Low_complexity Low_complexity 1 25 0 1803 140 29 32 chr5 161228888 161229196 -41856336 + AluJb SINE Alu 1 307 -5 262 319 21 102 chr5 161229606 161229841 -41855691 + L2 LINE L2 2966 3181 -91 222 315 161 0 chr5 161229887 161230036 -41855496 - MIR3 SINE MIR -3 205 33 729 207 49 0 chr5 161230084 161230248 -41855284 - MER5B DNA MER1_type -6 172 1 407 239 11 0 chr5 161230707 161230799 -41854733 - MIR3 SINE MIR -34 174 82 233 179 0 18 chr5 161230929 161230985 -41854547 + (TG)n Simple_repeat Simple_repeat 2 56 0 558 305 72 8 chr5 161231012 161231261 -41854271 - L2 LINE L2 -226 3087 2823 595 288 77 14 chr5 161232296 161232518 -41853014 - Charlie8 DNA MER1_type -2181 236 1 2241 82 7 3 chr5 161232647 161232939 -41852593 + AluSg SINE Alu 1 293 -17 782 288 35 4 chr5 161234515 161234741 -41850791 + MIR SINE MIR 1 233 -29 312 275 145 0 chr5 161234811 161234942 -41850590 - L2 LINE L2 -1 3271 3122 332 289 35 0 chr5 161235088 161235202 -41850330 - MIR SINE MIR -8 254 137 293 303 110 21 chr5 161235216 161235361 -41850171 - MIR3 SINE MIR -24 184 27 641 281 157 20 chr5 161236042 161236387 -41849145 + L2 LINE L2 2921 3312 -1 514 232 72 14 chr5 161236630 161236768 -41848764 + MIR SINE MIR 14 159 -103 258 275 89 89 chr5 161237890 161238148 -41847384 - L3 LINE CR1 -11 1566 1309 22 35 0 0 chr5 161239122 161239151 -41846381 + AT_rich Low_complexity Low_complexity 1 29 0 311 350 8 8 chr5 161239661 161239781 -41845751 + MIR SINE MIR 23 142 -66 1751 86 0 47 chr5 161240157 161240414 -41845118 + AluSc SINE Alu 65 309 0 495 260 80 14 chr5 161240475 161240692 -41844840 - MIR SINE MIR -10 252 17 333 252 9 45 chr5 161240763 161240874 -41844658 - MIR3 SINE MIR -13 195 89 268 310 103 0 chr5 161241161 161241277 -41844255 - L2 LINE L2 -2 3311 3184 494 288 16 8 chr5 161241607 161241732 -41843800 - L2 LINE L2 0 3313 3188 2163 106 0 17 chr5 161241739 161242032 -41843500 + AluSx SINE Alu 1 288 -24 2419 84 3 3 chr5 161242261 161242569 -41842963 + AluSp SINE Alu 1 308 -5 396 0 0 0 chr5 161242569 161242613 -41842919 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 215 62 0 chr5 161242635 161242700 -41842832 - MER112 DNA MER1_type -174 86 18 615 253 131 59 chr5 161242714 161243102 -41842430 - L2 LINE L2 -338 2976 2561 194 352 121 39 chr5 161243166 161243348 -41842184 - MIR SINE MIR -46 216 20 22 0 0 0 chr5 161244223 161244245 -41841287 + AT_rich Low_complexity Low_complexity 1 22 0 492 285 10 110 chr5 161244722 161245013 -41840519 + MIR SINE MIR 1 262 0 5814 126 48 28 chr5 161245100 161245406 -41840126 - L1MA4 LINE L1 -5 6295 5997 2238 88 25 0 chr5 161245406 161245691 -41839841 - AluSc SINE Alu -17 292 1 5814 126 48 28 chr5 161245691 161246393 -41839139 - L1MA4 LINE L1 -303 5997 5267 2364 85 0 7 chr5 161247638 161247945 -41837587 - AluSc SINE Alu -4 305 1 902 137 0 58 chr5 161248118 161248257 -41837275 + FLAM_C SINE Alu 1 131 -2 264 315 82 20 chr5 161248834 161248980 -41836552 - MLT1H LTR MaLR -2 547 393 1068 224 48 24 chr5 161249118 161249368 -41836164 + MIR SINE MIR 7 262 0 534 223 99 0 chr5 161249918 161250039 -41835493 + MER5A DNA MER1_type 57 189 0 602 268 37 0 chr5 161250095 161250259 -41835273 - MIR SINE MIR -34 228 59 239 315 0 0 chr5 161250562 161250651 -41834881 - L1MC4 LINE L1 -1340 6702 6614 237 311 22 0 chr5 161250583 161250673 -41834859 + L1MC4 LINE L1 6614 6705 -1337 * 293 274 0 32 chr5 161251072 161251167 -41834365 - MIR SINE MIR -43 219 128 1749 182 89 36 chr5 161251260 161251699 -41833833 - MLT1C LTR MaLR 0 467 6 492 276 50 79 chr5 161253443 161253722 -41831810 + L3b LINE CR1 1105 1375 -208 721 239 72 34 chr5 161253991 161254239 -41831293 + MIR SINE MIR 4 262 0 691 296 110 54 chr5 161255216 161255588 -41829944 - LTR16A LTR ERVL -6 444 52 413 333 42 12 chr5 161255611 161255776 -41829756 + MER5A DNA MER1_type 19 188 -1 1871 118 3 93 chr5 161256620 161256952 -41828580 + AluJb SINE Alu 1 302 -10 23 0 0 0 chr5 161257806 161257829 -41827703 + AT_rich Low_complexity Low_complexity 1 23 0 577 184 57 170 chr5 161257834 161258116 -41827416 - L1MC4 LINE L1 0 8042 7793 483 97 0 28 chr5 161258120 161258192 -41827340 - MADE1 DNA Mariner 0 80 11 366 123 15 31 chr5 161258176 161258241 -41827291 - MADE1 DNA Mariner -16 64 1 * 2728 203 47 68 chr5 161258242 161259081 -41826451 - L1MC4 LINE L1 -264 7778 6927 38 0 0 0 chr5 161260317 161260355 -41825177 + AT_rich Low_complexity Low_complexity 1 38 0 1223 238 82 107 chr5 161260588 161261198 -41824334 - MLT1G1 LTR MaLR 0 595 1 364 267 109 26 chr5 161261328 161261708 -41823824 - L1MEc LINE L1 -4867 1549 1264 186 274 0 0 chr5 161261781 161261832 -41823700 + MIR SINE MIR 2 52 -210 216 333 0 0 chr5 161262407 161262485 -41823047 + MIR SINE MIR 164 241 -21 300 260 79 71 chr5 161262596 161262723 -41822809 - MIR SINE MIR -113 149 22 2255 105 3 3 chr5 161262866 161263170 -41822362 + AluSx SINE Alu 1 304 -8 482 188 168 0 chr5 161263170 161263271 -41822261 - AluJo/FLAM SINE Alu -184 118 1 293 298 201 41 chr5 161263600 161263910 -41821622 + L2 LINE L2 2715 3085 -187 1258 246 38 27 chr5 161264571 161264994 -41820538 + L1ME1 LINE L1 5749 6176 -2 253 311 34 34 chr5 161264996 161265115 -41820417 - L2 LINE L2 -18 3295 3177 208 180 0 33 chr5 161265793 161265854 -41819678 + CT-rich Low_complexity Low_complexity 2 60 0 811 286 99 0 chr5 161266765 161266978 -41818554 + MIR SINE MIR 29 262 0 2365 101 0 3 chr5 161267763 161268069 -41817463 - AluSx SINE Alu -7 305 1 235 371 22 0 chr5 161268822 161268911 -41816621 + MER5A DNA MER1_type 66 156 -33 254 277 146 22 chr5 161269284 161269421 -41816111 - MIR SINE MIR -78 184 31 2336 100 3 0 chr5 161269447 161269747 -41815785 - AluSx SINE Alu -11 301 1 609 216 7 58 chr5 161270104 161270243 -41815289 - FLAM_A SINE Alu -1 132 1 2145 102 0 0 chr5 161270526 161270855 -41814677 - AluSx SINE Alu 0 329 1 2435 159 63 20 chr5 161271454 161271901 -41813631 + MLT1C LTR MaLR 2 467 0 205 259 47 47 chr5 161271947 161272032 -41813500 - L3 LINE CR1 -84 1493 1409 2048 141 0 16 chr5 161272123 161272428 -41813104 + AluSx SINE Alu 1 300 -12 184 254 85 0 chr5 161273371 161273430 -41812102 - L2 LINE L2 -20 3293 3230 318 254 0 14 chr5 161274100 161274171 -41811361 + MIR SINE MIR 47 116 -146 26 0 0 0 chr5 161274581 161274607 -41810925 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr5 161274830 161274850 -41810682 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 303 0 0 chr5 161275961 161276037 -41809495 + L2 LINE L2 3230 3305 -8 2241 65 0 4 chr5 161276266 161276543 -41808989 - AluY SINE Alu -7 304 29 244 173 0 40 chr5 161276606 161276681 -41808851 + CT-rich Low_complexity Low_complexity 3 74 0 939 247 32 28 chr5 161276734 161276981 -41808551 + MIR SINE MIR 2 249 -13 393 288 47 9 chr5 161277425 161277626 -41807906 + Charlie8 DNA MER1_type 1 286 -2131 3257 227 53 42 chr5 161279570 161280632 -41804900 - L1ME3 LINE L1 -2 6160 5101 806 282 0 19 chr5 161280987 161281200 -41804332 + MIR SINE MIR 24 232 -30 2182 92 10 3 chr5 161281347 161281639 -41803893 - AluSc SINE Alu -15 294 1 379 310 69 0 chr5 161282371 161282545 -41802987 - MER5A DNA MER1_type -2 187 2 189 220 136 0 chr5 161283840 161283899 -41801633 + MIR SINE MIR 177 243 -19 230 349 0 23 chr5 161284065 161284151 -41801381 - L2 LINE L2 -1 3271 3188 725 265 27 5 chr5 161285654 161285839 -41799693 - MIR SINE MIR -5 257 69 526 270 156 32 chr5 161285839 161286239 -41799293 - MLT1J LTR MaLR 0 511 8 407 279 197 64 chr5 161287486 161287729 -41797803 - MLT1K LTR MaLR -11 577 368 1123 208 22 31 chr5 161287729 161287955 -41797577 - MER58A DNA MER1_type 0 224 1 407 279 197 64 chr5 161287955 161288101 -41797431 - MLT1K LTR MaLR -220 368 136 4628 230 47 42 chr5 161288281 161288513 -41797019 + L1MD2 LINE L1 4015 4245 -2114 342 0 0 0 chr5 161288513 161288551 -41796981 + (CA)n Simple_repeat Simple_repeat 2 39 0 4628 230 47 42 chr5 161288551 161289573 -41795959 + L1MD2 LINE L1 4245 5261 -1098 207 0 0 0 chr5 161289573 161289596 -41795936 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 4628 230 47 42 chr5 161289596 161290668 -41794864 + L1MD2 LINE L1 5261 6346 -13 346 200 0 0 chr5 161291414 161291474 -41794058 - MER116 DNA Mariner -13 67 8 199 273 13 52 chr5 161291565 161291642 -41793890 - MIR3 SINE MIR -126 82 9 486 293 148 9 chr5 161292058 161292287 -41793245 + MIR SINE MIR 2 262 0 216 298 36 24 chr5 161292299 161292383 -41793149 + MIR SINE MIR 22 106 -102 4993 108 41 14 chr5 161292725 161293198 -41792334 - L1PA13 LINE L1 -3 6160 5658 2532 68 3 0 chr5 161293198 161293508 -41792024 + AluY SINE Alu 1 311 0 4993 108 41 14 chr5 161293508 161293794 -41791738 - L1PA13 LINE L1 -505 5658 5381 311 235 25 37 chr5 161294409 161294490 -41791042 + L2 LINE L2 3225 3304 -9 805 160 71 0 chr5 161294638 161294807 -41790725 - Charlie4 DNA MER1_type 0 1961 1781 827 193 134 15 chr5 161294846 161295048 -41790484 - Charlie4 DNA MER1_type -1720 241 16 2108 128 3 3 chr5 161295180 161295485 -41790047 - AluSx SINE Alu -7 305 1 237 244 0 0 chr5 161295554 161295599 -41789933 + L2 LINE L2 3261 3305 -8 2021 182 16 19 chr5 161295682 161296045 -41789487 - MLT1A1 LTR MaLR 0 365 4 788 248 59 67 chr5 161296693 161297114 -41788418 - L1ME LINE L1 -373 5748 5339 188 179 0 0 chr5 161297114 161297142 -41788390 + MIR SINE MIR 204 231 -31 1122 221 28 21 chr5 161298072 161298361 -41787171 - L1MC4a LINE L1 0 7808 7518 270 0 0 0 chr5 161299500 161299530 -41786002 + (A)n Simple_repeat Simple_repeat 1 30 0 348 277 20 10 chr5 161300127 161300228 -41785304 + L2 LINE L2 3171 3272 -41 1032 199 0 0 chr5 161300285 161300451 -41785081 + FAM SINE Alu 2 167 -8 226 261 18 0 chr5 161300730 161300841 -41784691 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 2193 116 0 10 chr5 161301231 161301534 -41783998 + AluSx SINE Alu 1 300 -12 757 0 21 0 chr5 161301573 161301666 -41783866 + (GA)n Simple_repeat Simple_repeat 1 95 0 318 282 0 0 chr5 161303361 161303464 -41782068 + C-rich Low_complexity Low_complexity 4 106 0 2161 122 0 0 chr5 161303464 161303751 -41781781 - AluSx SINE Alu -25 287 1 189 162 81 0 chr5 161304009 161304046 -41781486 + L3 LINE CR1 1536 1575 -2 1069 242 128 31 chr5 161304217 161304638 -41780894 - MLT1C LTR MaLR 0 467 6 2226 86 7 7 chr5 161305110 161305400 -41780132 - AluSg1 SINE Alu -19 290 1 268 232 81 40 chr5 161305628 161305727 -41779805 - L2 LINE L2 -5 3308 3206 1424 163 64 32 chr5 161307388 161307487 -41778045 + AluJb SINE Alu 1 95 -217 378 0 0 0 chr5 161307487 161307529 -41778003 + (CA)n Simple_repeat Simple_repeat 2 43 0 1424 163 64 32 chr5 161307529 161307712 -41777820 + AluJb SINE Alu 95 292 -20 1880 140 14 4 chr5 161308696 161308997 -41776535 + AluJo SINE Alu 2 305 0 2652 98 14 25 chr5 161309075 161309434 -41776098 - THE1A LTR MaLR 0 355 1 1911 154 3 3 chr5 161310786 161311079 -41774453 + AluJo SINE Alu 1 293 -19 870 181 0 0 chr5 161311188 161311346 -41774186 + FLAM_C SINE Alu 1 158 0 368 330 90 17 chr5 161311399 161311588 -41773944 - MIR3 SINE MIR 0 208 1 2187 230 79 25 chr5 161311679 161312271 -41773261 - MLT1E3 LTR MaLR 0 624 1 1125 172 167 26 chr5 161312713 161312946 -41772586 + Tigger7 DNA MER2_type 2 267 -2220 414 209 44 0 chr5 161312944 161313035 -41772497 + Tigger7 DNA MER2_type 2393 2487 0 * 520 291 112 55 chr5 161313190 161313575 -41771957 + L2 LINE L2 2875 3281 -32 1939 150 0 3 chr5 161313615 161313908 -41771624 + AluJb SINE Alu 3 294 -18 4786 117 18 7 chr5 161315198 161315581 -41769951 - L1PA13 LINE L1 0 6163 5768 300 111 0 0 chr5 161315581 161315626 -41769906 + (TG)n Simple_repeat Simple_repeat 2 46 0 4786 117 18 7 chr5 161315626 161315927 -41769605 - L1PA13 LINE L1 -395 5768 5472 224 151 11 172 chr5 161316014 161316107 -41769425 + L2 LINE L2 3009 3086 -227 865 240 54 68 chr5 161316644 161316936 -41768596 + MER113 DNA MER1_type? 5 291 -230 225 0 0 0 chr5 161316936 161316961 -41768571 + (CA)n Simple_repeat Simple_repeat 2 26 0 865 240 54 68 chr5 161316961 161317093 -41768439 + MER113 DNA MER1_type? 291 423 -98 8561 59 7 7 chr5 161317157 161318164 -41767368 - LTR13 LTR ERVK 0 1007 1 628 0 0 50 chr5 161319108 161319188 -41766344 - L1PA8 LINE L1 -1 6171 6096 233 208 0 0 chr5 161319414 161319462 -41766070 + (CA)n Simple_repeat Simple_repeat 1 48 0 1128 47 0 0 chr5 161319887 161320014 -41765518 + AluY SINE Alu 1 127 -184 243 125 0 0 chr5 161320443 161320483 -41765049 + (TCC)n Simple_repeat Simple_repeat 1 40 0 898 185 53 11 chr5 161320518 161320707 -41764825 - MIR SINE MIR -64 198 2 309 289 12 0 chr5 161321179 161321262 -41764270 + L2 LINE L2 3226 3309 -4 1608 188 33 16 chr5 161321305 161321488 -41764044 - AluJb SINE Alu -3 309 118 180 0 0 0 chr5 161321488 161321508 -41764024 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1608 188 33 16 chr5 161321508 161321628 -41763904 - AluJb SINE Alu -194 118 1 182 364 91 10 chr5 161322561 161322660 -41762872 - L2 LINE L2 -22 3291 3185 820 234 153 42 chr5 161322728 161323152 -41762380 - MLT1K LTR MaLR -47 541 13 208 318 132 16 chr5 161324003 161324132 -41761400 - MIR SINE MIR -11 251 108 2305 102 0 0 chr5 161324287 161324582 -41760950 + AluSx SINE Alu 1 295 -17 900 256 59 57 chr5 161324926 161325297 -41760235 - L1MA9 LINE L1 -38 6274 5903 24 77 0 0 chr5 161325375 161325427 -41760105 + AT_rich Low_complexity Low_complexity 1 52 0 244 298 65 24 chr5 161327539 161327663 -41757869 + MIR3 SINE MIR 31 159 -49 2750 10 0 0 chr5 161327828 161328122 -41757410 - AluYa5 SINE Alu -17 294 1 249 132 0 0 chr5 161328264 161328302 -41757230 - U3 snRNA snRNA -179 38 1 533 244 65 74 chr5 161329516 161329733 -41755799 - MLT1K LTR MaLR -185 403 189 510 303 115 4 chr5 161331167 161331401 -41754131 + MIR SINE MIR 2 261 -1 21 57 0 0 chr5 161331439 161331474 -41754058 + AT_rich Low_complexity Low_complexity 1 35 0 330 296 35 30 chr5 161331642 161331841 -41753691 + L1MC5 LINE L1 7477 7676 -285 2395 211 35 79 chr5 161332665 161333043 -41752489 - L1ME3 LINE L1 -87 6075 5712 2096 115 4 0 chr5 161333043 161333385 -41752147 - AluSq SINE Alu 0 347 5 2395 211 35 79 chr5 161333385 161333767 -41751765 - L1ME3 LINE L1 -450 5712 5314 531 288 125 0 chr5 161333870 161334054 -41751478 + MIR SINE MIR 12 218 -44 2046 125 7 0 chr5 161335917 161336206 -41749326 - AluSx SINE Alu -21 291 1 430 300 120 66 chr5 161336606 161337089 -41748443 - MLT1J LTR MaLR -2 509 1 5663 124 69 3 chr5 161337321 161338218 -41747314 + Tigger3b DNA MER2_type 1 956 -275 41193 64 12 2 chr5 161338218 161344296 -41741236 - L1PA5 LINE L1 -11 6143 3 2039 108 18 0 chr5 161344296 161344582 -41740950 + Tigger3b DNA MER2_type 941 1231 0 243 317 103 33 chr5 161344600 161344843 -41740689 - L1ME LINE L1 -546 5575 5316 2273 93 23 0 chr5 161345125 161345427 -41740105 - AluY SINE Alu -2 309 1 2209 102 3 46 chr5 161345674 161345860 -41739672 - AluSx SINE Alu -3 309 141 2837 16 0 0 chr5 161345860 161346168 -41739364 - AluYb8 SINE Alu -10 308 1 2209 102 3 46 chr5 161346168 161346304 -41739228 - AluSx SINE Alu -171 141 1 1433 160 3 100 chr5 161346339 161346658 -41738874 - AluJo SINE Alu -13 299 12 267 160 0 20 chr5 161346724 161346774 -41738758 - L2 LINE L2 -2 3311 3263 276 250 233 9 chr5 161347447 161347563 -41737969 - MIR SINE MIR -14 248 107 7152 60 10 37 chr5 161347604 161348902 -41736630 + L1PA7 LINE L1 4869 6153 -1 2194 116 10 13 chr5 161348911 161349214 -41736318 + AluSx SINE Alu 1 302 -10 200 259 34 109 chr5 161349368 161349607 -41735925 - L2 LINE L2 -966 2348 2128 345 202 180 34 chr5 161349626 161349715 -41735817 + L1ME LINE L1 5521 5622 -548 483 200 87 0 chr5 161349718 161349833 -41735699 - MER58 DNA MER1_type -2150 270 146 2633 219 37 48 chr5 161349877 161350095 -41735437 - MER82 DNA MER2_type -6 647 428 1697 149 3 65 chr5 161350095 161350416 -41735116 - AluJo SINE Alu -11 301 1 2633 219 37 48 chr5 161350416 161350850 -41734682 - MER82 DNA MER2_type -225 428 2 255 250 0 13 chr5 161350851 161350927 -41734605 + (TA)n Simple_repeat Simple_repeat 1 75 0 514 104 0 104 chr5 161351363 161351459 -41734073 + AluJ/FRAM SINE Alu 223 308 -4 370 161 0 0 chr5 161351460 161351516 -41734016 + MER82 DNA MER2_type 424 479 -174 288 390 45 17 chr5 161351762 161351939 -41733593 - MIR3 SINE MIR -7 201 20 2996 224 63 45 chr5 161352323 161353204 -41732328 + L1ME2 LINE L1 4980 5871 -293 4557 52 0 11 chr5 161353204 161353743 -41731789 + L1PA8 LINE L1 5626 6158 -14 2996 224 63 45 chr5 161353743 161354041 -41731491 + L1ME2 LINE L1 5871 6162 -2 342 243 55 89 chr5 161354074 161354276 -41731256 + L1MC4 LINE L1 7836 8030 -12 309 307 42 32 chr5 161356475 161356578 -41728954 - MIR SINE MIR -63 145 61 3184 111 0 29 chr5 161356578 161357021 -41728511 - MER57B LTR ERV1 -4 430 1 309 307 42 32 chr5 161357021 161357067 -41728465 - MIR SINE MIR -147 61 17 385 265 95 14 chr5 161357298 161357445 -41728087 - L3 LINE CR1 -206 1371 1213 494 312 95 20 chr5 161357835 161358088 -41727444 - MLT1K LTR MaLR -56 532 261 450 319 0 14 chr5 161358150 161358294 -41727238 - MLT1K LTR MaLR -424 164 23 216 67 0 0 chr5 161359010 161359040 -41726492 + (T)n Simple_repeat Simple_repeat 1 30 0 186 265 0 20 chr5 161359067 161359116 -41726416 - L2 LINE L2 -4 3268 3221 1678 105 143 4 chr5 161359651 161359917 -41725615 + AluSx SINE Alu 3 305 -7 509 266 149 19 chr5 161360285 161360499 -41725033 + MIR SINE MIR 14 255 -7 497 347 40 0 chr5 161360844 161361017 -41724515 - MIR SINE MIR -40 222 43 234 174 0 0 chr5 161361989 161362035 -41723497 + (CAT)n Simple_repeat Simple_repeat 2 47 0 699 271 89 14 chr5 161362058 161362272 -41723260 + MIR SINE MIR 12 241 -21 524 268 39 0 chr5 161362998 161363151 -41722381 + MIR SINE MIR 70 228 -34 804 284 121 33 chr5 161363735 161364218 -41721314 + L2 LINE L2 2784 3313 0 291 262 0 87 chr5 161364647 161364750 -41720782 - MIR SINE MIR -70 192 99 288 299 68 22 chr5 161364964 161365103 -41720429 - MIR3 SINE MIR -21 187 41 501 47 0 0 chr5 161365233 161365297 -41720235 + (TA)n Simple_repeat Simple_repeat 2 65 0 2379 86 0 3 chr5 161365371 161365674 -41719858 - AluY SINE Alu -9 302 1 1593 239 43 8 chr5 161365729 161366102 -41719430 + MER58D DNA MER1_type 1 386 0 612 300 50 0 chr5 161366306 161366486 -41719046 + MIR SINE MIR 59 247 -15 482 274 94 26 chr5 161368577 161368811 -41716721 + L1ME LINE L1 5532 5781 -340 2382 86 0 0 chr5 161369148 161369440 -41716092 + AluSg SINE Alu 7 298 -12 207 133 0 44 chr5 161370220 161370265 -41715267 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 894 321 60 24 chr5 161370539 161371785 -41713747 - L1ME LINE L1 -468 5702 4409 593 145 0 0 chr5 161372882 161372965 -41712567 - AluJ/FLAM SINE Alu -228 84 2 2481 65 0 7 chr5 161373351 161373657 -41711875 - AluY SINE Alu -7 304 1 336 265 142 51 chr5 161373764 161374138 -41711394 - L1ME4a LINE L1 -9 6112 5705 465 240 134 47 chr5 161374308 161374479 -41711053 + MIR SINE MIR 77 262 0 279 270 0 0 chr5 161374645 161374708 -41710824 - MER113 DNA MER1_type? -2 519 457 2176 95 29 10 chr5 161374785 161375091 -41710441 - AluSx SINE Alu 0 312 1 865 215 130 10 chr5 161375125 161375325 -41710207 - MER58A DNA MER1_type 0 224 1 215 308 13 13 chr5 161376555 161376633 -41708899 + CT-rich Low_complexity Low_complexity 2 79 0 522 237 22 15 chr5 161377324 161377459 -41708073 - MIR SINE MIR -10 252 117 409 291 46 86 chr5 161377537 161377792 -41707740 + MIR SINE MIR 7 253 -9 316 280 77 28 chr5 161377912 161378055 -41707477 - MIR3 SINE MIR -56 152 3 1247 240 76 68 chr5 161378964 161379746 -41705786 - L2 LINE L2 -64 3249 2458 1924 152 0 38 chr5 161379885 161380201 -41705331 - AluSx SINE Alu -8 304 1 205 143 61 20 chr5 161380593 161380642 -41704890 - MER5A DNA MER1_type -85 104 54 340 309 52 51 chr5 161380739 161380884 -41704648 + MIR SINE MIR 1 145 -85 243 0 0 0 chr5 161380884 161380911 -41704621 + (ATG)n Simple_repeat Simple_repeat 2 28 0 340 309 52 51 chr5 161380911 161380932 -41704600 + MIR SINE MIR 145 164 -66 21 0 0 0 chr5 161381072 161381093 -41704439 + AT_rich Low_complexity Low_complexity 1 21 0 453 303 130 29 chr5 161381277 161381515 -41704017 - MIR SINE MIR 0 262 1 1821 181 0 13 chr5 161382111 161382426 -41703106 - AluJb SINE Alu -1 311 1 473 326 125 10 chr5 161383855 161384247 -41701285 - L2 LINE L2 -420 2894 2458 619 129 89 0 chr5 161384445 161384546 -41700986 - AluSc SINE Alu -9 300 191 4175 166 46 14 chr5 161386693 161387474 -41698058 + L1MB7 LINE L1 5379 6184 0 3175 109 2 28 chr5 161387957 161388359 -41697173 + L1PB1 LINE L1 5705 6095 -56 2381 110 0 0 chr5 161388359 161388669 -41696863 + AluSx SINE Alu 1 310 -2 3175 109 2 28 chr5 161388669 161388725 -41696807 + L1PB1 LINE L1 6095 6151 0 394 317 24 0 chr5 161389334 161389493 -41696039 + MIR SINE MIR 50 213 -49 603 265 68 38 chr5 161389530 161389747 -41695785 + MIR SINE MIR 42 262 0 1596 191 126 3 chr5 161390120 161390537 -41694995 - Charlie4a DNA MER1_type 0 508 27 277 270 109 80 chr5 161391184 161391391 -41694141 + L1ME4a LINE L1 5633 5851 -270 2224 110 0 0 chr5 161391391 161391682 -41693850 - AluSc SINE Alu 0 309 19 277 270 109 80 chr5 161391682 161391748 -41693784 + L1ME4a LINE L1 5851 5914 -207 2030 134 7 13 chr5 161391906 161392213 -41693319 - AluSx SINE Alu -7 305 1 27 0 0 0 chr5 161392229 161392256 -41693276 + AT_rich Low_complexity Low_complexity 1 27 0 196 313 82 67 chr5 161392886 161393020 -41692512 + MIR3 SINE MIR 67 202 -6 1000 266 142 23 chr5 161393177 161393748 -41691784 - L2 LINE L2 -33 3280 2640 3246 176 29 13 chr5 161395679 161396293 -41689239 - L1MD1 LINE L1 -5 6237 5614 254 331 110 19 chr5 161396863 161397017 -41688515 - MLT1K LTR MaLR -27 561 394 236 167 0 0 chr5 161398315 161398351 -41687181 - MIR SINE MIR -11 251 216 2080 112 3 14 chr5 161398422 161398558 -41686974 + AluSx SINE Alu 1 137 -175 2148 118 7 7 chr5 161398558 161398862 -41686670 + AluSq SINE Alu 1 304 -9 2080 112 3 14 chr5 161398862 161399019 -41686513 + AluSx SINE Alu 137 291 -21 448 281 118 48 chr5 161399499 161399898 -41685634 - L1ME4a LINE L1 -1 6120 5694 281 336 161 14 chr5 161399942 161400159 -41685373 + MIR SINE MIR 13 261 -1 413 239 18 18 chr5 161400159 161400268 -41685264 - L1ME4a LINE L1 -438 5683 5575 249 273 40 27 chr5 161400362 161400512 -41685020 - L1ME4a LINE L1 -2361 5447 5296 1669 131 21 92 chr5 161400520 161400855 -41684677 - AluSx SINE Alu 0 312 2 1940 163 0 0 chr5 161400978 161401267 -41684265 - AluSx SINE Alu -23 289 1 2432 89 3 0 chr5 161401340 161401643 -41683889 + AluSg SINE Alu 1 304 -6 2452 80 3 0 chr5 161404896 161405196 -41680336 + AluSg SINE Alu 1 301 -9 271 276 20 31 chr5 161405645 161405743 -41679789 - MLT1K LTR MaLR 0 588 492 357 233 217 46 chr5 161405772 161406012 -41679520 - MLT1K LTR MaLR -169 419 139 1262 269 94 48 chr5 161406434 161407107 -41678425 - L1ME4a LINE L1 -58 6063 5360 216 0 0 0 chr5 161409023 161409047 -41676485 + (T)n Simple_repeat Simple_repeat 1 24 0 317 305 9 37 chr5 161410845 161410967 -41674565 + MIR SINE MIR 38 156 -52 247 329 89 27 chr5 161413385 161413531 -41672001 - MER5A DNA MER1_type -18 171 17 202 289 0 0 chr5 161413850 161413902 -41671630 + MIR SINE MIR 79 130 -78 746 243 188 40 chr5 161414313 161414659 -41670873 - MLT1L LTR MaLR -1 614 218 336 324 51 70 chr5 161415857 161416212 -41669320 + L2 LINE L2 2459 2806 -508 242 118 20 78 chr5 161416286 161416337 -41669195 + L2 LINE L2 3265 3312 -1 236 264 94 80 chr5 161416339 161416551 -41668981 + L2 LINE L2 2885 3099 -173 444 181 0 151 chr5 161416839 161417005 -41668527 + MER102b DNA MER1_type 201 341 0 450 231 134 0 chr5 161418181 161418315 -41667217 + MIR SINE MIR 8 159 -103 2232 148 20 12 chr5 161418737 161419081 -41666451 + MER7A DNA MER2_type 1 345 -1 403 238 49 63 chr5 161419082 161419225 -41666307 + MIR SINE MIR 116 256 -6 221 57 29 0 chr5 161419719 161419754 -41665778 + (CCCCCT)n Simple_repeat Simple_repeat 4 39 0 2034 148 0 3 chr5 161420590 161420894 -41664638 + AluSx SINE Alu 3 305 -7 2107 250 99 47 chr5 161420971 161422078 -41663454 + L2 LINE L2 1233 3313 0 2239 169 7 23 chr5 161423129 161423334 -41662198 + L1 LINE L1 4410 4617 -1529 2047 144 0 7 chr5 161423334 161423640 -41661892 + AluSx SINE Alu 1 304 -8 2239 169 7 23 chr5 161423640 161423866 -41661666 + L1 LINE L1 4617 4834 -1312 * 5482 142 59 29 chr5 161423865 161424334 -41661198 + L1MA5A LINE L1 4671 5124 -1173 2177 106 13 3 chr5 161424334 161424635 -41660897 + AluSx SINE Alu 3 306 -6 5482 142 59 29 chr5 161424635 161425747 -41659785 + L1MA5A LINE L1 5124 6297 0 330 252 143 50 chr5 161426255 161426374 -41659158 + MIR SINE MIR 20 149 -59 1418 207 30 10 chr5 161427149 161427444 -41658088 + MER58B DNA MER1_type 40 340 -1 290 310 42 105 chr5 161427503 161427742 -41657790 - L2 LINE L2 -4 3268 3045 56 16 0 0 chr5 161428004 161428067 -41657465 + AT_rich Low_complexity Low_complexity 1 63 0 373 273 22 58 chr5 161428211 161428350 -41657182 + MER5A DNA MER1_type 56 189 0 1963 154 0 0 chr5 161428412 161428705 -41656827 - AluJb SINE Alu -19 293 1 1514 185 31 24 chr5 161428708 161429000 -41656532 - AluJo SINE Alu -14 298 5 375 250 44 102 chr5 161429540 161429783 -41655749 - L1ME LINE L1 -362 5792 5544 441 200 234 28 chr5 161430940 161431085 -41654447 + MER96 DNA MER1_type? 1 175 0 462 264 66 0 chr5 161432844 161432965 -41652567 - L2 LINE L2 0 3313 3185 1210 299 160 12 chr5 161433082 161434039 -41651493 - L2 LINE L2 -164 3149 2041 664 286 31 50 chr5 161434180 161434439 -41651093 + MIR SINE MIR 6 259 -3 2402 63 13 3 chr5 161434439 161434741 -41650791 + AluY SINE Alu 2 306 -5 359 329 114 40 chr5 161435161 161435389 -41650143 - MIR SINE MIR -13 249 5 196 307 129 55 chr5 161436012 161436175 -41649357 + L2 LINE L2 3093 3267 -5 2172 136 0 0 chr5 161436195 161436505 -41649027 - AluSq SINE Alu -3 310 1 2364 91 0 3 chr5 161437471 161437778 -41647754 + AluSg SINE Alu 2 307 -3 242 311 72 36 chr5 161440194 161440340 -41645192 + L2 LINE L2 2839 2993 -279 2633 51 3 13 chr5 161440340 161440655 -41644877 - AluSp SINE Alu -1 312 1 242 311 72 36 chr5 161440655 161440675 -41644857 + L2 LINE L2 2993 3011 -261 212 30 30 30 chr5 161440700 161440733 -41644799 + MER5A DNA MER1_type 43 75 -114 1871 205 102 44 chr5 161441310 161441828 -41643704 - LTR10A LTR ERV1 -61 548 1 11879 157 17 16 chr5 161441829 161444861 -41640671 - Harlequin LTR ERV1 -2 6647 1906 2539 58 7 3 chr5 161444861 161445170 -41640362 - AluY SINE Alu -1 310 1 11879 157 17 16 chr5 161445170 161445272 -41640260 - Harlequin LTR ERV1 -4743 1906 1806 276 274 167 0 chr5 161445273 161445357 -41640175 + LTR8 LTR ERV1 156 253 -438 1137 43 0 0 chr5 161445359 161445500 -41640032 - LTR10A-int LTR ERV1 -5176 1720 1580 * 5678 81 9 66 chr5 161445470 161446443 -41639089 - LTR10A-int LTR ERV1 -5475 1421 705 268 196 120 76 chr5 161446451 161446543 -41638989 - LTR10A-int LTR ERV1 -5579 1070 975 * 299 217 66 38 chr5 161446535 161446641 -41638891 - LTR10A-int LTR ERV1 -6039 610 502 896 227 59 37 chr5 161446940 161447213 -41638319 - LTR10A-int LTR ERV1 -6364 285 7 1779 202 145 29 chr5 161447227 161447718 -41637814 - LTR10A LTR ERV1 -61 548 1 281 234 32 0 chr5 161447806 161447900 -41637632 + (TA)n Simple_repeat Simple_repeat 1 97 0 827 135 57 0 chr5 161447912 161448053 -41637479 - L1MB5 LINE L1 0 6174 6026 4584 190 146 26 chr5 161448075 161448315 -41637217 - Charlie1 DNA MER1_type 0 2761 2551 1860 110 4 15 chr5 161448315 161448578 -41636954 - AluSq SINE Alu -53 260 1 4584 190 146 26 chr5 161448578 161449513 -41636019 - Charlie1 DNA MER1_type -210 2551 1445 229 219 68 41 chr5 161449504 161449577 -41635955 - Charlie1 DNA MER1_type -2686 75 1 * 530 91 0 0 chr5 161449670 161449736 -41635796 + AluS SINE Alu 2 67 -246 2013 123 0 40 chr5 161449763 161450088 -41635444 + AluSx SINE Alu 1 312 0 2449 76 0 7 chr5 161450245 161450549 -41634983 + AluY SINE Alu 1 302 -9 30 27 0 0 chr5 161451048 161451085 -41634447 + AT_rich Low_complexity Low_complexity 1 37 0 322 340 7 20 chr5 161451119 161451269 -41634263 + L3 LINE CR1 877 1024 -553 451 305 60 15 chr5 161451365 161451565 -41633967 + MIR SINE MIR 49 257 -5 717 205 89 42 chr5 161451566 161451825 -41633707 - LTR37B LTR ERV1 0 468 198 511 274 56 22 chr5 161452045 161452224 -41633308 + L1MEd LINE L1 223 407 -5712 730 284 83 48 chr5 161452362 161452919 -41632613 + L1MEd LINE L1 655 1230 -4889 2035 149 0 7 chr5 161453515 161453824 -41631708 + AluSx SINE Alu 1 307 -5 5389 62 14 6 chr5 161455985 161456647 -41628885 + L1PA7 LINE L1 5477 6143 -11 515 146 34 11 chr5 161456647 161456736 -41628796 + L1MA9 LINE L1 5774 5864 -448 1322 262 103 31 chr5 161456835 161456934 -41628598 + L1ME4a LINE L1 5508 5598 -523 2142 130 0 3 chr5 161456934 161457242 -41628290 + AluSx SINE Alu 1 307 -5 1322 262 103 31 chr5 161457242 161457715 -41627817 + L1ME4a LINE L1 5598 6121 0 2284 88 3 3 chr5 161457800 161458138 -41627394 + AluSp SINE Alu 1 338 0 2345 105 0 0 chr5 161459173 161459479 -41626053 - AluSx SINE Alu -6 306 1 479 284 180 16 chr5 161459623 161459873 -41625659 + L2 LINE L2 3012 3302 -11 328 278 83 28 chr5 161459874 161460018 -41625514 - L2 LINE L2 -391 2923 2772 186 333 13 26 chr5 161461681 161461759 -41623773 + MIR SINE MIR 102 178 -84 1929 124 57 10 chr5 161462148 161462446 -41623086 - AluSx SINE Alu 0 312 1 887 282 121 21 chr5 161462543 161463072 -41622460 + L2 LINE L2 2720 3308 -5 203 175 0 0 chr5 161464003 161464043 -41621489 + CT-rich Low_complexity Low_complexity 1 40 0 516 297 134 4 chr5 161464043 161464275 -41621257 + MIR SINE MIR 1 262 0 206 298 48 12 chr5 161464742 161464826 -41620706 - L2 LINE L2 -52 3261 3175 3142 188 30 9 chr5 161465175 161465745 -41619787 - L1MB2 LINE L1 -14 6157 5576 557 251 44 39 chr5 161466604 161466799 -41618733 + MIR SINE MIR 1 183 -65 2157 137 0 0 chr5 161467757 161468064 -41617468 + AluSq SINE Alu 1 307 -6 340 311 84 24 chr5 161468371 161468538 -41616994 - MIR SINE MIR -12 250 74 459 196 159 118 chr5 161468635 161468880 -41616652 - MER112 DNA MER1_type 0 256 2 195 273 104 0 chr5 161470623 161470700 -41614832 - L2 LINE L2 -21 3292 3208 283 310 43 17 chr5 161470807 161470923 -41614609 - L2 LINE L2 -237 3035 2917 405 260 7 78 chr5 161470970 161471124 -41614408 - MIR SINE MIR -60 202 60 1886 151 0 4 chr5 161471195 161471474 -41614058 + AluJo SINE Alu 1 278 -34 1632 32 0 5 chr5 161471474 161471660 -41613872 + L1PA4 LINE L1 5971 6155 0 299 355 8 0 chr5 161473966 161474087 -41611445 + (ATGGTG)n Simple_repeat Simple_repeat 1 122 0 448 232 36 0 chr5 161474090 161474202 -41611330 - MIR SINE MIR -10 252 137 235 257 140 0 chr5 161474208 161474344 -41611188 - L1MB2 LINE L1 -812 5334 5180 1023 283 137 13 chr5 161474675 161475203 -41610329 + L2 LINE L2 2529 3126 -187 1493 108 56 6 chr5 161475203 161475631 -41609901 - LTR54 LTR ERV1 0 510 1 232 269 17 76 chr5 161475631 161475750 -41609782 + L2 LINE L2 3125 3236 -77 758 220 7 0 chr5 161475784 161475936 -41609596 + MLT1F LTR MaLR 1 162 -399 1701 179 13 20 chr5 161476276 161476578 -41608954 + AluJo SINE Alu 1 300 -12 210 37 0 0 chr5 161476671 161476698 -41608834 + (CA)n Simple_repeat Simple_repeat 2 28 0 1066 228 128 68 chr5 161477045 161477489 -41608043 - MLT1H LTR MaLR 0 549 79 446 315 128 9 chr5 161478446 161478665 -41606867 - MIR SINE MIR 0 262 18 22 0 0 0 chr5 161480680 161480702 -41604830 + AT_rich Low_complexity Low_complexity 1 22 0 373 231 43 19 chr5 161482087 161482218 -41603314 - MIR SINE MIR -67 141 14 588 249 117 28 chr5 161482244 161482457 -41603075 + MIR SINE MIR 13 244 -18 609 304 84 14 chr5 161482496 161482710 -41602822 - MIR SINE MIR -24 238 10 327 245 58 26 chr5 161485167 161485322 -41600210 + L1ME4a LINE L1 5761 5920 -201 212 324 28 0 chr5 161485336 161485407 -41600125 + MIR SINE MIR 176 248 -14 211 352 136 0 chr5 161485437 161485525 -41600007 + L2 LINE L2 3173 3272 0 344 325 65 7 chr5 161485618 161485772 -41599760 + MIR SINE MIR 99 261 -1 426 244 46 15 chr5 161485928 161486059 -41599473 + L1ME4a LINE L1 5964 6098 -23 234 274 163 33 chr5 161486373 161486526 -41599006 + L3b LINE CR1 1290 1462 -121 287 272 107 0 chr5 161487210 161487313 -41598219 + L2 LINE L2 3186 3299 -14 437 238 57 0 chr5 161487487 161487609 -41597923 + MIR SINE MIR 117 245 -17 650 261 124 9 chr5 161487840 161488066 -41597466 + MIR SINE MIR 3 254 -8 443 245 74 15 chr5 161488325 161488520 -41597012 - L1MC/D LINE L1 -374 5747 5590 379 250 0 28 chr5 161489656 161489764 -41595768 + MER113 DNA MER1_type? 1 105 -416 189 0 0 0 chr5 161490857 161490878 -41594654 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 25 31 0 0 chr5 161491902 161491934 -41593598 + AT_rich Low_complexity Low_complexity 1 32 0 519 176 108 47 chr5 161491960 161492108 -41593424 - MIR SINE MIR -65 197 41 603 244 19 13 chr5 161492736 161492913 -41592619 - MER5A DNA MER1_type 0 189 1 774 293 24 12 chr5 161493001 161493254 -41592278 + MIR SINE MIR 7 262 0 198 103 0 0 chr5 161493445 161493474 -41592058 + (TGGGGG)n Simple_repeat Simple_repeat 5 33 0 2316 82 7 16 chr5 161494841 161495146 -41590386 - AluSg SINE Alu -8 302 1 25 0 0 0 chr5 161496970 161496995 -41588537 + AT_rich Low_complexity Low_complexity 1 25 0 1614 192 3 22 chr5 161497097 161497414 -41588118 - AluJo SINE Alu -1 311 1 271 304 62 50 chr5 161499058 161499219 -41586313 - MIR SINE MIR -64 198 36 5760 172 22 20 chr5 161503403 161504380 -41581152 + L1MC2 LINE L1 4915 5900 -444 2102 116 7 7 chr5 161504380 161504674 -41580858 + AluSx SINE Alu 1 294 -18 5760 172 22 20 chr5 161504674 161505110 -41580422 + L1MC2 LINE L1 5900 6333 -11 274 254 0 0 chr5 161505121 161505176 -41580356 + Charlie8 DNA MER1_type 118 172 -2245 817 183 102 57 chr5 161505267 161505530 -41580002 + MLT1H LTR MaLR 3 317 -232 492 295 33 62 chr5 161506782 161507023 -41578509 - L2 LINE L2 -3 3310 3077 366 200 44 0 chr5 161507024 161507114 -41578418 + MIR SINE MIR 94 187 -75 1018 203 0 5 chr5 161509129 161509316 -41576216 + MER5A DNA MER1_type 1 186 -3 2146 147 0 3 chr5 161509872 161510184 -41575348 - AluSx SINE Alu -1 311 1 412 256 47 23 chr5 161510578 161510707 -41574825 + MIR SINE MIR 44 175 -87 22 35 0 0 chr5 161510993 161511022 -41574510 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr5 161511581 161511602 -41573930 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 641 296 188 12 chr5 161511631 161512063 -41573469 - LTR33 LTR ERVL -8 513 6 260 303 91 12 chr5 161512063 161512228 -41573304 + L1MC/D LINE L1 5724 5901 -1907 529 331 0 28 chr5 161512234 161512412 -41573120 - MER5B DNA MER1_type -2 176 4 2506 86 0 0 chr5 161512761 161513065 -41572467 - AluY SINE Alu -7 304 1 1825 145 36 13 chr5 161513182 161513485 -41572047 - AluJo SINE Alu -2 310 1 2239 124 0 7 chr5 161513711 161514018 -41571514 - AluSx SINE Alu -7 305 1 327 49 0 0 chr5 161514981 161515022 -41570510 + (CA)n Simple_repeat Simple_repeat 2 42 0 1532 192 69 0 chr5 161515562 161515838 -41569694 + AluJb SINE Alu 5 299 -13 2253 100 0 0 chr5 161516139 161516457 -41569075 - AluSx SINE Alu 0 318 1 181 269 103 39 chr5 161518174 161518252 -41567280 + MIR SINE MIR 2 84 -178 1208 220 25 18 chr5 161518266 161518543 -41566989 - L1PA16 LINE L1 -4 6162 5884 522 228 24 0 chr5 161518572 161518695 -41566837 + MIR SINE MIR 127 252 -10 2008 129 0 49 chr5 161519893 161520219 -41565313 + AluSx SINE Alu 3 312 0 181 316 42 21 chr5 161520754 161520849 -41564683 - L2 LINE L2 -211 3061 2965 279 0 0 0 chr5 161521152 161521183 -41564349 + (T)n Simple_repeat Simple_repeat 1 31 0 236 288 0 14 chr5 161521957 161522030 -41563502 - LTR67 LTR ERVL -2 555 484 * 1287 287 46 34 chr5 161521970 161522469 -41563063 - MLT1K LTR MaLR -17 571 67 466 254 193 11 chr5 161523315 161523496 -41562036 - MIR SINE MIR -41 221 8 507 258 61 25 chr5 161523834 161523997 -41561535 - MIR SINE MIR -10 252 84 501 143 0 12 chr5 161525958 161526042 -41559490 - AluJ/FLAM SINE Alu -229 83 1 331 235 88 29 chr5 161526246 161526382 -41559150 - MIR SINE MIR -37 225 82 477 286 21 26 chr5 161526881 161527070 -41558462 + L1MC4a LINE L1 5719 5906 -1902 2198 99 0 0 chr5 161528538 161528851 -41556681 + AluSx SINE Alu 1 313 0 235 279 0 15 chr5 161530611 161530679 -41554853 - MIR SINE MIR -106 156 90 2420 115 0 0 chr5 161530694 161531006 -41554526 - AluSx SINE Alu 0 312 1 416 284 112 0 chr5 161531365 161531534 -41553998 - MIR SINE MIR -19 243 56 2192 106 14 0 chr5 161531582 161531875 -41553657 - AluSx SINE Alu -15 297 1 289 288 102 0 chr5 161531927 161532045 -41553487 + L2 LINE L2 3141 3270 -2 292 305 30 51 chr5 161532548 161532784 -41552748 + L2 LINE L2 1854 2084 -1230 2321 94 0 3 chr5 161532823 161533120 -41552412 - AluSc SINE Alu -3 306 11 1931 142 96 6 chr5 161533187 161533531 -41552001 - THE1C LTR MaLR 0 375 1 194 175 25 0 chr5 161534100 161534140 -41551392 + L2 LINE L2 3019 3059 -213 196 207 49 73 chr5 161534285 161534367 -41551165 + L2 LINE L2 3234 3313 0 268 349 58 33 chr5 161534544 161534785 -41550747 + L2 LINE L2 2729 2975 -339 400 286 63 8 chr5 161535107 161535233 -41550299 + L2 LINE L2 3136 3268 -4 231 36 0 0 chr5 161535780 161535808 -41549724 + (A)n Simple_repeat Simple_repeat 1 28 0 297 308 45 8 chr5 161536011 161536144 -41549388 + MIR SINE MIR 123 260 -2 716 298 119 20 chr5 161537560 161538097 -41547435 + L1ME4a LINE L1 5530 6119 -2 300 309 57 0 chr5 161538387 161538510 -41547022 - MIR SINE MIR -20 242 113 885 216 62 25 chr5 161539728 161539969 -41545563 - MIR SINE MIR -1 261 12 305 281 52 62 chr5 161542058 161542250 -41543282 + L2 LINE L2 3002 3191 -122 263 208 40 88 chr5 161542313 161542438 -41543094 - Charlie7 DNA MER1_type -52 2560 2442 477 267 0 0 chr5 161542519 161542639 -41542893 + L2 LINE L2 3190 3309 -4 452 227 9 15 chr5 161543144 161543276 -41542256 + L1ME4a LINE L1 1529 1912 -4304 * 1144 193 43 0 chr5 161543274 161543528 -41542004 + L1ME4a LINE L1 5102 5366 -849 * 1358 240 58 15 chr5 161543520 161543916 -41541616 + L1MB7 LINE L1 5770 6182 -2 357 184 72 56 chr5 161544279 161544404 -41541128 - MER113 DNA MER1_type? -386 135 9 607 189 54 23 chr5 161545114 161545314 -41540218 + MER58 DNA MER1_type 1 2415 -5 2224 211 100 57 chr5 161545654 161545942 -41539590 + MER44D DNA MER2_type 1 275 -2212 2366 98 0 9 chr5 161545942 161546257 -41539275 - AluSx SINE Alu 0 312 1 2224 211 100 57 chr5 161546257 161546670 -41538862 + MER44D DNA MER2_type 275 604 -1 208 318 0 35 chr5 161547084 161547169 -41538363 - L2 LINE L2 -542 2772 2691 535 140 32 11 chr5 161548607 161548700 -41536832 + L1MC1 LINE L1 6238 6332 -1 1340 263 89 35 chr5 161548935 161549038 -41536494 - L1ME3A LINE L1 -138 6024 5928 3578 189 25 3 chr5 161549038 161549677 -41535855 + MER82 DNA MER2_type 1 653 0 1340 263 89 35 chr5 161549677 161550314 -41535218 - L1ME3A LINE L1 -234 5928 5255 625 168 58 26 chr5 161550441 161550596 -41534936 - L1ME3A LINE L1 -1099 5047 4888 882 83 42 0 chr5 161551523 161551643 -41533889 - L1PA16 LINE L1 -9 6157 6033 1106 283 52 14 chr5 161552878 161553299 -41532233 + L1ME4a LINE L1 5548 5984 -206 395 232 78 21 chr5 161553304 161553446 -41532086 + L1ME4a LINE L1 6035 6184 -6 2323 92 18 59 chr5 161554608 161554999 -41530533 - L1P LINE L1 -3479 2667 2293 7517 36 9 1 chr5 161555002 161556785 -41528747 + L1PA7 LINE L1 4372 6154 0 2253 112 0 3 chr5 161556947 161557243 -41528289 + AluSq SINE Alu 1 295 -18 370 281 101 12 chr5 161558345 161558515 -41527017 + MIR SINE MIR 10 192 -63 350 261 59 34 chr5 161558519 161558638 -41526894 - L2 LINE L2 0 3313 3192 2179 128 0 0 chr5 161562205 161562501 -41523031 + AluSx SINE Alu 1 296 -16 2137 112 50 31 chr5 161562806 161563163 -41522369 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr5 161563703 161563725 -41521807 + AT_rich Low_complexity Low_complexity 1 22 0 1005 118 20 51 chr5 161563886 161564081 -41521451 + MER53 DNA DNA 1 189 0 1441 151 89 11 chr5 161564285 161564556 -41520976 - AluJo SINE Alu -15 297 6 462 208 0 0 chr5 161565419 161565496 -41520036 + MER58 DNA MER1_type 2344 2420 0 520 264 31 12 chr5 161565504 161565570 -41519962 + MER5B DNA MER1_type 1 64 -114 2549 54 0 0 chr5 161565570 161565867 -41519665 + AluY SINE Alu 1 297 -14 520 264 31 12 chr5 161565867 161565963 -41519569 + MER5B DNA MER1_type 64 166 -12 25 0 0 0 chr5 161567155 161567180 -41518352 + AT_rich Low_complexity Low_complexity 1 25 0 3091 154 52 20 chr5 161568156 161568766 -41516766 - L1MB8 LINE L1 0 6178 5549 358 313 215 0 chr5 161568917 161569205 -41516327 + L2 LINE L2 2560 2909 -405 262 217 0 0 chr5 161569206 161569252 -41516280 + MER58A DNA MER1_type 5 50 -174 207 184 0 0 chr5 161569819 161569857 -41515675 + (TG)n Simple_repeat Simple_repeat 2 39 0 617 272 135 19 chr5 161570416 161570728 -41514804 + L2 LINE L2 2554 2901 -413 673 200 67 30 chr5 161570736 161570871 -41514661 + MER58A DNA MER1_type 5 144 0 185 274 60 12 chr5 161570917 161571001 -41514531 + L2 LINE L2 2894 2981 -291 370 270 30 0 chr5 161571050 161571150 -41514382 + L2 LINE L2 3170 3272 0 534 277 28 51 chr5 161571533 161571786 -41513746 + MIR SINE MIR 6 252 -10 542 259 98 0 chr5 161571853 161572027 -41513505 + MIR SINE MIR 28 218 -44 371 328 0 0 chr5 161572448 161572573 -41512959 - MER5A DNA MER1_type -41 148 24 276 354 7 14 chr5 161573073 161573217 -41512315 - MIR SINE MIR -2 260 118 180 0 0 0 chr5 161574131 161574151 -41511381 + (A)n Simple_repeat Simple_repeat 1 20 0 1831 147 0 31 chr5 161574236 161574529 -41511003 - AluJb SINE Alu -28 284 1 291 85 0 0 chr5 161574622 161574669 -41510863 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 383 38 19 0 chr5 161574950 161575003 -41510529 + (CA)n Simple_repeat Simple_repeat 1 54 0 2173 135 0 3 chr5 161577883 161578195 -41507337 - AluSx SINE Alu -1 311 1 2581 65 0 0 chr5 161578906 161579216 -41506316 + AluY SINE Alu 1 310 -1 258 241 114 0 chr5 161583886 161583965 -41501567 + L2 LINE L2 3160 3247 -25 492 300 86 18 chr5 161584344 161584564 -41500968 - L3b LINE CR1 -63 1520 1286 203 373 51 0 chr5 161584815 161584933 -41500599 - L2 LINE L2 -248 3065 2942 217 258 0 30 chr5 161584938 161585004 -41500528 + GA-rich Low_complexity Low_complexity 2 65 0 268 255 141 11 chr5 161585160 161585332 -41500200 - MIR SINE MIR -36 226 28 1871 134 4 0 chr5 161585337 161585511 -41500021 - AluSx SINE Alu -14 298 121 243 0 0 0 chr5 161585511 161585538 -41499994 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1871 134 4 0 chr5 161585538 161585632 -41499900 - AluSx SINE Alu -191 121 29 2544 72 0 0 chr5 161586166 161586473 -41499059 + AluY SINE Alu 1 307 -4 699 294 52 0 chr5 161586866 161587097 -41498435 - MIR SINE MIR -12 250 8 652 261 13 52 chr5 161587195 161587425 -41498107 + MLT1K LTR MaLR 10 230 -358 1752 174 10 13 chr5 161587762 161588072 -41497460 + AluJb SINE Alu 1 309 -3 2182 96 43 20 chr5 161588661 161588962 -41496570 - AluSg SINE Alu -2 308 1 222 277 0 0 chr5 161589140 161589187 -41496345 + polypurine Low_complexity Low_complexity 1 47 0 751 287 175 29 chr5 161589452 161589937 -41495595 + MLT1K LTR MaLR 10 565 -23 293 286 57 0 chr5 161590050 161590155 -41495377 + MIR SINE MIR 81 191 -71 619 178 0 0 chr5 161590443 161590550 -41494982 + MSTA LTR MaLR 1 107 -321 1969 139 84 12 chr5 161590594 161590938 -41494594 + MSTA LTR MaLR 60 428 0 2397 93 8 93 chr5 161591353 161591751 -41493781 - THE1B LTR MaLR 0 364 1 425 180 200 10 chr5 161592470 161592535 -41492997 - MER63 DNA MER1_type -91 745 694 264 100 0 0 chr5 161592535 161592575 -41492957 + (CCCCCA)n Simple_repeat Simple_repeat 3 42 0 425 180 200 10 chr5 161592575 161592609 -41492923 - MER63 DNA MER1_type -142 694 1 189 0 0 0 chr5 161593294 161593315 -41492217 + (TG)n Simple_repeat Simple_repeat 1 21 0 2227 116 0 10 chr5 161594077 161594388 -41491144 + AluSx SINE Alu 2 309 -3 243 154 0 0 chr5 161594445 161594484 -41491048 + MIR SINE MIR 158 196 -66 2793 196 150 20 chr5 161594635 161595517 -41490015 + L1MC4 LINE L1 7041 8036 -6 606 273 11 38 chr5 161596052 161596235 -41489297 + MIR SINE MIR 14 191 -71 373 315 133 75 chr5 161597334 161597709 -41487823 + L2 LINE L2 2815 3211 -61 2545 117 0 14 chr5 161597787 161598156 -41487376 + THE1B LTR MaLR 1 364 0 2254 120 0 7 chr5 161599534 161599843 -41485689 - AluSx SINE Alu -5 307 1 378 0 0 0 chr5 161599951 161599993 -41485539 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 877 150 13 0 chr5 161600000 161600231 -41485301 + (TGGA)n Simple_repeat Simple_repeat 1 234 0 774 166 17 0 chr5 161600259 161600434 -41485098 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 383 229 8 0 chr5 161600455 161600573 -41484959 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 2338 161 61 9 chr5 161600577 161601018 -41484514 - MLT1C LTR MaLR 0 467 4 492 291 69 42 chr5 161601045 161601378 -41484154 - L1MC4a LINE L1 -1879 5929 5588 230 279 25 25 chr5 161602160 161602239 -41483293 - MIR SINE MIR -135 127 49 442 329 7 15 chr5 161602263 161602400 -41483132 - L2 LINE L2 -4 3268 3133 453 257 119 0 chr5 161603233 161603385 -41482147 - MIR SINE MIR -62 146 25 234 343 14 0 chr5 161604161 161604231 -41481301 + MIR3 SINE MIR 88 158 -50 534 209 82 32 chr5 161604323 161604481 -41481051 + MER97c DNA MER1_type? 14 179 -911 866 243 149 6 chr5 161604553 161604874 -41480658 - MLT1K LTR MaLR -13 575 209 302 98 20 0 chr5 161605456 161605507 -41480025 + (TA)n Simple_repeat Simple_repeat 1 52 0 868 181 35 15 chr5 161605514 161605713 -41479819 - L1ME3A LINE L1 -60 6110 5908 1670 142 64 0 chr5 161605747 161606059 -41479473 - AluSx SINE Alu 0 329 1 21 0 0 0 chr5 161606096 161606117 -41479415 + AT_rich Low_complexity Low_complexity 1 21 0 916 116 6 55 chr5 161606117 161606281 -41479251 - LTR9 LTR ERV1 -85 527 372 2609 128 25 11 chr5 161606281 161606727 -41478805 - HUERS-P3 LTR ERV1 -8401 518 67 2190 109 0 40 chr5 161606728 161607050 -41478482 + AluSg SINE Alu 2 310 0 413 162 0 0 chr5 161607069 161607137 -41478395 - HUERS-P3 LTR ERV1 -8837 82 15 1113 73 6 56 chr5 161607152 161607331 -41478201 - LTR9 LTR ERV1 0 612 443 1051 96 83 0 chr5 161607339 161607533 -41477999 - AluSc SINE Alu 0 344 138 1022 209 23 30 chr5 161607536 161607799 -41477733 - MLT2C1 LTR ERVL -136 261 1 331 276 74 74 chr5 161607800 161608057 -41477475 - L1M4 LINE L1 -1221 4925 4669 2033 158 3 0 chr5 161608394 161608691 -41476841 + AluSx SINE Alu 1 298 -14 318 106 0 0 chr5 161609462 161609509 -41476023 + (TG)n Simple_repeat Simple_repeat 1 47 0 878 236 73 12 chr5 161609512 161609758 -41475774 + MIR SINE MIR 1 261 -1 255 170 0 0 chr5 161609803 161609850 -41475682 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1746 217 53 37 chr5 161609902 161610413 -41475119 - L1ME1 LINE L1 -4 6162 5644 589 263 140 5 chr5 161610715 161610901 -41474631 - MIR SINE MIR -3 259 49 221 81 0 27 chr5 161610918 161610955 -41474577 + (CCCCCT)n Simple_repeat Simple_repeat 6 41 0 * 775 76 0 17 chr5 161610953 161611071 -41474461 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 1794 159 10 10 chr5 161611079 161611380 -41474152 - AluJb SINE Alu -11 301 1 186 208 75 75 chr5 161611638 161611691 -41473841 - L2 LINE L2 -1 3271 3219 231 252 43 52 chr5 161611737 161611852 -41473680 + MLT1L LTR MaLR 153 266 -349 382 304 6 63 chr5 161612398 161612556 -41472976 - MIR SINE MIR -43 219 71 2550 149 42 18 chr5 161612752 161613254 -41472278 - L1MA9 LINE L1 -5 6307 5794 288 77 0 0 chr5 161613254 161613293 -41472239 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr5 161613324 161613344 -41472188 + (TG)n Simple_repeat Simple_repeat 1 20 0 265 171 13 40 chr5 161613347 161613423 -41472109 + L1M2 LINE L1 5755 5828 -472 324 0 0 0 chr5 161613423 161613459 -41472073 + (CA)n Simple_repeat Simple_repeat 2 37 0 1323 141 0 5 chr5 161613463 161613683 -41471849 - L1MA9 LINE L1 -537 5775 5557 2296 163 14 2 chr5 161614654 161615077 -41470455 - L1MB7 LINE L1 -46 6138 5711 518 153 0 12 chr5 161615077 161615162 -41470370 - Tigger7 DNA MER2_type 0 2487 2404 * 1244 173 108 8 chr5 161615161 161615410 -41470122 - Tigger7 DNA MER2_type -459 274 1 1217 171 53 0 chr5 161615411 161615657 -41469875 - L1MB7 LINE L1 -463 5711 5453 22 0 0 0 chr5 161615931 161615953 -41469579 + AT_rich Low_complexity Low_complexity 1 22 0 255 302 58 22 chr5 161616244 161616383 -41469149 - MIR SINE MIR -50 212 69 1707 123 26 19 chr5 161616431 161616772 -41468760 - MER4A LTR ERV1 0 664 263 612 111 0 10 chr5 161616772 161616871 -41468661 - MER4A LTR ERV1 -566 98 1 1727 142 80 0 chr5 161617097 161617372 -41468160 + AluJb SINE Alu 1 297 -15 387 357 61 25 chr5 161617684 161617964 -41467568 - L2 LINE L2 -455 2859 2570 3571 201 33 34 chr5 161618236 161619522 -41466010 - L1ME1 LINE L1 -5 6161 4873 * 8560 197 39 20 chr5 161619520 161622846 -41462686 - L1MC1 LINE L1 0 6333 2932 1851 168 3 0 chr5 161622846 161623143 -41462389 - AluJb SINE Alu -14 298 1 8560 197 39 20 chr5 161623143 161623382 -41462150 - L1MC1 LINE L1 -3401 2932 2699 2939 222 71 60 chr5 161623395 161623731 -41461801 - L1ME1 LINE L1 -1263 4883 4552 1266 165 35 9 chr5 161623731 161623961 -41461571 + MER46A DNA MER2_type 1 236 0 2939 222 71 60 chr5 161623961 161624180 -41461352 - L1ME1 LINE L1 -1594 4552 4337 1098 215 23 0 chr5 161624180 161624399 -41461133 - MER58A DNA MER1_type 0 224 1 2939 222 71 60 chr5 161624399 161624463 -41461069 - L1ME1 LINE L1 -1809 4337 4275 2881 165 21 19 chr5 161624463 161625030 -41460502 - L1MB5 LINE L1 -8 6166 5596 1566 211 7 23 chr5 161625030 161625334 -41460198 - AluJo SINE Alu -13 299 1 2939 222 71 60 chr5 161625343 161626014 -41459518 - L1ME1 LINE L1 -1871 4275 3577 288 309 32 9 chr5 161626195 161626363 -41459169 - MIR SINE MIR 0 262 36 1680 190 151 23 chr5 161626743 161627062 -41458470 - L1MB8 LINE L1 -1 6177 5900 2041 126 0 57 chr5 161627062 161627241 -41458291 - AluSx SINE Alu -13 299 144 2241 75 21 0 chr5 161627241 161627523 -41458009 - AluSp SINE Alu -25 288 1 2041 126 0 57 chr5 161627523 161627660 -41457872 - AluSx SINE Alu -168 144 1 1680 190 151 23 chr5 161627660 161627862 -41457670 - L1MB8 LINE L1 -278 5900 5589 216 0 0 0 chr5 161628532 161628556 -41456976 + (A)n Simple_repeat Simple_repeat 1 24 0 1336 110 245 4 chr5 161628873 161629146 -41456386 + MER44D DNA MER2_type 1 609 0 549 229 49 66 chr5 161629316 161629499 -41456033 + MIR SINE MIR 77 256 -6 197 369 71 24 chr5 161629916 161630000 -41455532 + L2 LINE L2 3162 3249 -23 1103 157 0 22 chr5 161635470 161635648 -41449884 - AluJo/FRAM SINE Alu 0 312 139 1493 142 56 0 chr5 161635648 161635880 -41449652 - AluJo SINE Alu -67 245 1 233 264 154 109 chr5 161636032 161636142 -41449390 + MIR SINE MIR 86 200 -62 248 192 200 33 chr5 161636582 161636702 -41448830 + MER103 DNA DNA 8 147 -19 808 203 0 13 chr5 161636794 161636952 -41448580 - AluSg/x SINE Alu -20 292 137 21 36 0 0 chr5 161637342 161637370 -41448162 + AT_rich Low_complexity Low_complexity 1 28 0 351 314 25 94 chr5 161637445 161637722 -41447810 + L1M4 LINE L1 142 399 -5997 321 121 15 61 chr5 161638015 161638081 -41447451 + MER20 DNA MER1_type 1 63 -156 1399 253 133 33 chr5 161638142 161639013 -41446519 + L1M4 LINE L1 2702 3659 -2556 532 240 64 34 chr5 161639017 161639250 -41446282 + L1M4 LINE L1 3761 4000 -2215 275 54 0 0 chr5 161639254 161639291 -41446241 - L1M3 LINE L1 -455 5728 5692 231 224 75 0 chr5 161639325 161639392 -41446140 + L1M4 LINE L1 5516 5587 -666 1947 254 93 21 chr5 161639404 161640521 -41445011 + L1ME LINE L1 2572 3800 -2346 571 235 81 0 chr5 161640557 161640706 -41444826 + MER58A DNA MER1_type 46 206 -18 2341 93 0 7 chr5 161640825 161641125 -41444407 - AluSg SINE Alu -12 298 1 1634 228 148 51 chr5 161641138 161641210 -41444322 + L1ME LINE L1 4547 4611 -1555 1677 152 71 4 chr5 161641210 161641479 -41444053 - AluJb SINE Alu -25 287 1 1634 228 148 51 chr5 161641479 161641530 -41444002 + L1ME LINE L1 4611 4656 -1510 1805 97 127 0 chr5 161641530 161641797 -41443735 + AluSq SINE Alu 1 301 -2 1634 228 148 51 chr5 161641797 161642697 -41442835 + L1ME LINE L1 4656 5674 -492 1061 191 34 5 chr5 161642923 161643132 -41442400 + MER58A DNA MER1_type 2 216 -8 1912 139 28 0 chr5 161643280 161643568 -41441964 - AluSx SINE Alu -16 296 1 2077 135 0 0 chr5 161643933 161644230 -41441302 - AluSc SINE Alu -12 297 1 378 192 0 0 chr5 161644307 161644380 -41441152 - L1MCb LINE L1 -3970 2594 2522 3752 203 59 55 chr5 161644381 161645653 -41439879 - L1MCb LINE L1 -4883 1162 42 3076 82 17 0 chr5 161645816 161646230 -41439302 + L1PB1 LINE L1 5724 6144 -7 618 96 43 0 chr5 161647104 161647198 -41438334 - L1MC1 LINE L1 0 6333 6236 2604 120 24 7 chr5 161647199 161647608 -41437924 - L1MC1 LINE L1 -179 6154 5739 23 0 0 0 chr5 161648551 161648574 -41436958 + AT_rich Low_complexity Low_complexity 1 23 0 2280 106 6 3 chr5 161649501 161649812 -41435720 + AluSx SINE Alu 1 312 0 2191 110 7 10 chr5 161651712 161652020 -41433512 - AluSx SINE Alu -5 307 1 1633 115 54 70 chr5 161652137 161652468 -41433064 + L1MA4 LINE L1 5970 6295 -5 23 0 0 0 chr5 161654219 161654242 -41431290 + AT_rich Low_complexity Low_complexity 1 23 0 898 241 88 0 chr5 161654741 161654957 -41430575 + MIR SINE MIR 1 235 -27 8519 184 35 62 chr5 161655704 161658024 -41427508 + L1PA16 LINE L1 3199 5440 -725 3453 154 22 0 chr5 161658026 161658609 -41426923 + L1PA16 LINE L1 5563 6158 -8 2624 49 0 0 chr5 161659586 161659890 -41425642 - AluY SINE Alu -7 304 1 1399 155 52 65 chr5 161660873 161661164 -41424368 + AluJo SINE Alu 1 287 -25 200 300 0 0 chr5 161661220 161661270 -41424262 + L2 LINE L2 2592 2641 -673 310 375 109 13 chr5 161661311 161661540 -41423992 + L2 LINE L2 2966 3216 -56 2106 98 4 0 chr5 161661764 161662038 -41423494 - AluSc SINE Alu -6 303 29 1076 118 0 4 chr5 161662050 161662236 -41423296 + ALR/Alpha Satellite centromeric 1 185 -70 274 133 0 0 chr5 161662224 161662269 -41423263 - AluSc SINE Alu -257 45 1 * 571 258 84 6 chr5 161663135 161663313 -41422219 - L1ME3A LINE L1 -11 6159 5968 2125 95 16 30 chr5 161663346 161663651 -41421881 - AluSg SINE Alu -9 301 1 228 179 191 60 chr5 161664197 161664281 -41421251 + MIR3 SINE MIR 74 158 -50 1333 163 96 39 chr5 161664344 161664626 -41420906 - AluJo SINE Alu -14 298 1 521 225 178 5 chr5 161664654 161664867 -41420665 - MER113 DNA MER1_type? -118 403 154 865 228 5 47 chr5 161664868 161665083 -41420449 + MLT1F LTR MaLR 1 206 -336 419 131 0 0 chr5 161665309 161665370 -41420162 + Tigger5 DNA MER2_type 2258 2318 -5 368 106 212 15 chr5 161665372 161665438 -41420094 - Tigger5 DNA MER2_type -2244 79 1 342 293 160 28 chr5 161666053 161666234 -41419298 + L2 LINE L2 3027 3231 -41 548 233 48 7 chr5 161667164 161667310 -41418222 - L1ME1 LINE L1 -5 6161 6010 355 219 48 0 chr5 161667741 161667846 -41417686 - L1MC4 LINE L1 0 8042 7933 429 265 93 21 chr5 161669243 161669475 -41416057 + MIR SINE MIR 2 252 -10 271 316 161 18 chr5 161670628 161670796 -41414736 + MIR SINE MIR 20 211 -51 2849 169 143 15 chr5 161670944 161671613 -41413919 - Charlie1a DNA MER1_type -435 1020 266 624 239 132 0 chr5 161671641 161671800 -41413732 - Charlie1a DNA MER1_type -1275 180 1 238 339 126 8 chr5 161671813 161671940 -41413592 + MIR SINE MIR 19 160 -102 1217 164 28 5 chr5 161672251 161672465 -41413067 + MER20 DNA MER1_type 1 219 0 201 263 35 0 chr5 161673208 161673265 -41412267 + MIR3 SINE MIR 111 169 -39 683 254 60 32 chr5 161674784 161675001 -41410531 - MIR SINE MIR -25 237 15 2733 161 56 37 chr5 161675671 161675896 -41409636 + MER44D DNA MER2_type 1 220 -2267 2664 74 3 28 chr5 161675896 161676260 -41409272 - THE1A LTR MaLR 0 355 1 10992 92 26 20 chr5 161676260 161677831 -41407701 - THE1A-int LTR MaLR 0 1580 1 2597 99 0 0 chr5 161677831 161678186 -41407346 - THE1A LTR MaLR 0 355 1 2733 161 56 37 chr5 161678186 161678497 -41407035 + MER44D DNA MER2_type 219 604 -1 254 258 133 67 chr5 161678777 161678897 -41406635 - MIR SINE MIR -119 143 16 1824 133 69 28 chr5 161679750 161680110 -41405422 - THE1C LTR MaLR 0 375 1 8968 124 30 64 chr5 161680110 161681743 -41403789 - THE1C-int LTR MaLR 0 1580 4 1708 156 75 31 chr5 161681746 161682105 -41403427 - THE1C LTR MaLR 0 375 1 288 293 32 73 chr5 161682113 161682236 -41403296 - MIR SINE MIR -98 164 47 2151 168 13 2 chr5 161683535 161683928 -41401604 + L1PA15 LINE L1 4526 4922 -1224 4939 111 11 4 chr5 161683928 161684646 -41400886 + L1PA15 LINE L1 5438 6165 0 1148 66 88 33 chr5 161685091 161685272 -41400260 + L1PA10 LINE L1 5978 6168 0 2244 89 0 0 chr5 161686183 161686496 -41399036 + AluSc SINE Alu 1 313 0 2411 78 7 0 chr5 161686795 161687090 -41398442 + AluSp SINE Alu 1 297 -16 355 259 216 0 chr5 161688456 161688618 -41396914 - L1ME LINE L1 -355 5766 5570 830 233 220 10 chr5 161688980 161689280 -41396252 + HAL1 LINE L1 4 366 -2141 24 0 0 0 chr5 161689358 161689382 -41396150 + AT_rich Low_complexity Low_complexity 1 24 0 1689 139 24 44 chr5 161689385 161689679 -41395853 + AluSx SINE Alu 1 288 -24 198 167 0 0 chr5 161689679 161689715 -41395817 + (CATA)n Simple_repeat Simple_repeat 3 38 0 1082 242 133 45 chr5 161689860 161690460 -41395072 + L1ME3A LINE L1 5288 5940 -230 248 285 0 106 chr5 161690565 161690688 -41394844 + L1ME3A LINE L1 5967 6076 -94 6092 148 72 11 chr5 161690733 161691891 -41393641 + Tigger3b DNA MER2_type 3 1231 0 953 229 159 11 chr5 161692003 161692374 -41393158 - HAL1 LINE L1 -1220 1287 862 272 264 55 33 chr5 161692423 161692514 -41393018 + HAL1 LINE L1 476 568 -1939 451 228 58 29 chr5 161692518 161692689 -41392843 + L1M4 LINE L1 1156 1331 -5053 * 767 195 77 122 chr5 161692678 161693120 -41392412 + L1M4 LINE L1 4495 4916 -1466 2455 76 0 0 chr5 161693173 161693476 -41392056 - AluSg SINE Alu -7 303 1 1143 63 0 32 chr5 161693523 161693681 -41391851 - L1PA14 LINE L1 -10 6151 5999 480 256 51 36 chr5 161694941 161695144 -41390388 - MIR SINE MIR -24 238 31 211 304 54 62 chr5 161695371 161695483 -41390049 - L2 LINE L2 -23 3290 3180 213 347 8 41 chr5 161695889 161696010 -41389522 + MIR SINE MIR 23 139 -69 616 281 0 41 chr5 161696179 161696350 -41389182 - MIR SINE MIR -94 168 5 21 89 0 0 chr5 161696639 161696695 -41388837 + AT_rich Low_complexity Low_complexity 1 56 0 550 265 88 34 chr5 161697076 161697218 -41388314 - MIR SINE MIR -44 218 85 4535 148 40 45 chr5 161697218 161697288 -41388244 + MER6 DNA MER2_type 1 70 -795 2213 82 0 60 chr5 161697288 161697607 -41387925 + AluSx SINE Alu 3 302 -10 4535 148 40 45 chr5 161697607 161697919 -41387613 + MER6 DNA MER2_type 70 382 -483 2096 122 3 0 chr5 161697919 161698206 -41387326 - AluSx SINE Alu -24 288 1 4535 148 40 45 chr5 161698206 161698691 -41386841 + MER6 DNA MER2_type 382 865 0 550 265 88 34 chr5 161698691 161698752 -41386780 - MIR SINE MIR -177 85 4 183 42 0 0 chr5 161700024 161700048 -41385484 + (CA)n Simple_repeat Simple_repeat 2 25 0 2435 232 16 2 chr5 161701035 161701526 -41384006 - MER82 DNA MER2_type -1 652 155 587 290 60 85 chr5 161702383 161702749 -41382783 - L2 LINE L2 -1 3271 2915 957 388 87 35 chr5 161702791 161703716 -41381816 - L2 LINE L2 -496 2818 1846 393 349 8 83 chr5 161703732 161704093 -41381439 + L2 LINE L2 2516 2849 -465 183 184 0 0 chr5 161704834 161704872 -41380660 + (CA)n Simple_repeat Simple_repeat 1 38 0 14462 124 45 10 chr5 161705272 161707376 -41378156 - Tigger1 DNA MER2_type 0 2418 225 2143 92 10 7 chr5 161707376 161707668 -41377864 + AluSx SINE Alu 14 306 -6 14462 124 45 10 chr5 161707668 161707900 -41377632 - Tigger1 DNA MER2_type -2193 225 2 320 268 189 47 chr5 161707946 161708073 -41377459 - MER5A DNA MER1_type 0 189 29 704 189 25 0 chr5 161708082 161708225 -41377307 + FRAM SINE Alu 29 174 0 23 33 0 0 chr5 161708927 161708957 -41376575 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 161709060 161709082 -41376450 + AT_rich Low_complexity Low_complexity 1 22 0 2330 78 7 0 chr5 161711342 161711637 -41373895 + AluSp SINE Alu 1 297 -16 191 139 0 47 chr5 161712073 161712116 -41373416 - L2 LINE L2 -3 3310 3270 2150 123 0 3 chr5 161712357 161712667 -41372865 + AluSx SINE Alu 1 309 -3 28 48 0 0 chr5 161714008 161714050 -41371482 + AT_rich Low_complexity Low_complexity 1 42 0 320 187 40 0 chr5 161714070 161714145 -41371387 - Tigger8 DNA MER2_type -352 314 237 459 264 45 112 chr5 161714318 161714560 -41370972 - Tigger8 DNA MER2_type -438 228 3 3882 213 66 42 chr5 161714757 161715083 -41370449 + L1MB7 LINE L1 4 321 -6221 2270 100 0 3 chr5 161715083 161715383 -41370149 - AluY SINE Alu -12 299 1 3882 213 66 42 chr5 161715383 161716208 -41369324 + L1MB7 LINE L1 321 1183 -5359 834 77 0 0 chr5 161716210 161716314 -41369218 + AluY SINE Alu 197 300 -11 10387 218 66 26 chr5 161716357 161717424 -41368108 + L1MB7 LINE L1 1203 2226 -4456 1871 164 7 3 chr5 161717424 161717728 -41367804 - AluJo SINE Alu -7 305 1 10387 218 66 26 chr5 161717728 161718948 -41366584 + L1MB7 LINE L1 2226 3396 -3286 2264 104 0 3 chr5 161718948 161719247 -41366285 + AluSq SINE Alu 1 298 -15 10387 218 66 26 chr5 161719247 161721256 -41364276 + L1MB7 LINE L1 3396 5324 -1358 288 0 0 0 chr5 161721256 161721288 -41364244 + (CA)n Simple_repeat Simple_repeat 2 33 0 10387 218 66 26 chr5 161721288 161721466 -41364066 + L1MB7 LINE L1 5324 5493 -1189 2635 123 26 14 chr5 161721466 161721889 -41363643 - MSTC LTR MaLR 0 428 1 10387 218 66 26 chr5 161721889 161722398 -41363134 + L1MB7 LINE L1 5493 6475 -207 557 175 10 0 chr5 161722398 161722495 -41363037 + MER20 DNA MER1_type 118 215 -4 298 353 64 5 chr5 161724292 161724476 -41361056 + MIR SINE MIR 16 206 -27 3241 170 127 5 chr5 161724666 161725318 -41360214 - MER44D DNA MER2_type -1 604 1 187 79 53 0 chr5 161725671 161725709 -41359823 + A-rich Low_complexity Low_complexity 3 42 0 28 0 0 0 chr5 161725723 161725751 -41359781 + AT_rich Low_complexity Low_complexity 1 28 0 635 251 102 70 chr5 161725852 161726174 -41359358 + L1ME3A LINE L1 5566 5903 -267 1345 48 0 0 chr5 161726174 161726341 -41359191 + L1PA6 LINE L1 5987 6153 -1 635 251 102 70 chr5 161726341 161726392 -41359140 + L1ME3A LINE L1 5903 5951 -219 24 0 0 0 chr5 161726631 161726655 -41358877 + AT_rich Low_complexity Low_complexity 1 24 0 2463 51 3 0 chr5 161726928 161727222 -41358310 + AluY SINE Alu 1 295 -16 335 279 190 0 chr5 161728072 161728251 -41357281 + L1MC4a LINE L1 5665 5877 -1931 1732 176 0 10 chr5 161730683 161730979 -41354553 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr5 161732250 161732271 -41353261 + AT_rich Low_complexity Low_complexity 1 21 0 741 237 123 42 chr5 161732271 161732642 -41352890 + MLT1H LTR MaLR 37 512 -37 7051 147 42 6 chr5 161733533 161734920 -41350612 + L1M1 LINE L1 4003 5437 -744 479 128 0 0 chr5 161735072 161735150 -41350382 + L1MA2 LINE L1 6227 6304 0 411 224 318 6 chr5 161735336 161735515 -41350017 - MIR SINE MIR -20 242 8 184 224 211 0 chr5 161735513 161735589 -41349943 + MIR3 SINE MIR 114 205 -3 * 332 346 39 0 chr5 161786010 161786140 -41299392 + L2 LINE L2 3179 3313 0 4118 96 12 67 chr5 161786640 161787402 -41298130 + L1PA10 LINE L1 5437 6156 -12 1553 112 0 65 chr5 161787430 161787751 -41297781 - AluSx SINE Alu -7 305 6 2283 98 0 0 chr5 161790141 161790437 -41295095 + AluSg SINE Alu 1 296 -14 431 316 46 41 chr5 161790791 161791009 -41294523 - MLT1K LTR MaLR -369 219 1 1717 133 8 4 chr5 161791211 161791467 -41294065 - AluSg SINE Alu -53 257 1 1705 257 76 9 chr5 161791484 161792021 -41293511 - L1M4 LINE L1 -1832 4314 3742 955 253 69 7 chr5 161792046 161792452 -41293080 - L1ME2 LINE L1 -13 6151 5705 1568 208 11 19 chr5 161792452 161792845 -41292687 - MSTB2 LTR MaLR 0 457 4 2559 236 115 12 chr5 161792859 161793561 -41291971 - MLT1K-int LTR MaLR 0 1735 967 195 217 84 36 chr5 161793708 161793791 -41291741 + L2 LINE L2 2888 2974 -340 5275 160 69 64 chr5 161793894 161794511 -41291021 + Ricksha_b DNA DNA 9 622 -2645 229 276 0 0 chr5 161794511 161794569 -41290963 + MLT2B1 LTR ERVL 280 337 -183 5275 160 69 64 chr5 161794569 161795181 -41290351 + Ricksha_b DNA DNA 622 1654 -13 445 295 54 0 chr5 161795263 161795392 -41290140 + L2 LINE L2 3136 3271 -1 4619 179 101 13 chr5 161796385 161797372 -41288160 - Tigger6a DNA MER2_type -1 1082 9 388 149 0 93 chr5 161797372 161797479 -41288053 - MSTD LTR MaLR 0 396 300 401 290 195 10 chr5 161797582 161797782 -41287750 - MIR SINE MIR -19 243 7 274 295 13 13 chr5 161799055 161799133 -41286399 + L2 LINE L2 3192 3269 -3 2092 97 17 37 chr5 161799177 161799477 -41286055 + AluSg SINE Alu 9 302 -8 464 261 124 25 chr5 161799707 161799948 -41285584 - L1ME3A LINE L1 -222 5948 5684 251 328 85 42 chr5 161800116 161800305 -41285227 + MIR SINE MIR 2 198 -64 282 275 66 0 chr5 161800749 161800840 -41284692 + MIR SINE MIR 112 208 -54 1842 141 42 0 chr5 161801333 161801617 -41283915 - AluSx SINE Alu -16 296 1 844 239 53 61 chr5 161802007 161802271 -41283261 + MIR SINE MIR 1 262 0 4839 167 26 17 chr5 161803507 161804794 -41280738 - L1MB8 LINE L1 -1 6177 4883 380 323 91 52 chr5 161805139 161805446 -41280086 + L2 LINE L2 2930 3248 -24 639 200 30 7 chr5 161805480 161805615 -41279917 + MIR SINE MIR 101 238 -24 189 288 68 0 chr5 161805583 161805642 -41279890 + L2 LINE L2 3251 3313 0 * 595 276 141 0 chr5 161805952 161806151 -41279381 + MIR SINE MIR 4 230 -32 297 0 0 0 chr5 161806390 161806423 -41279109 + (CA)n Simple_repeat Simple_repeat 2 34 0 234 188 0 59 chr5 161806636 161806721 -41278811 + CT-rich Low_complexity Low_complexity 1 80 0 221 277 43 0 chr5 161807613 161807707 -41277825 + L2 LINE L2 3160 3257 -56 256 268 0 42 chr5 161807789 161807860 -41277672 - MER5A DNA MER1_type -83 106 39 463 277 214 0 chr5 161807892 161808098 -41277434 + MIR SINE MIR 13 262 0 481 311 116 9 chr5 161808162 161808387 -41277145 + MIR SINE MIR 14 262 0 321 284 42 0 chr5 161808547 161808642 -41276890 + MIR SINE MIR 57 155 -107 4672 98 3 23 chr5 161808767 161809509 -41276023 - L1PA14 LINE L1 -1 6160 5434 6301 138 17 0 chr5 161809739 161811364 -41274168 - L1PA4 LINE L1 -322 5833 4185 60 80 0 0 chr5 161811364 161811501 -41274031 + AT_rich Low_complexity Low_complexity 1 137 0 2213 186 19 67 chr5 161811501 161812023 -41273509 - L1MB3 LINE L1 -15 6168 5672 265 190 17 35 chr5 161812189 161812247 -41273285 - L2 LINE L2 -25 3247 3191 638 237 20 86 chr5 161812747 161812992 -41272540 + MIR SINE MIR 9 237 -25 458 343 42 36 chr5 161813029 161813385 -41272147 + L2 LINE L2 2855 3212 -60 948 263 49 4 chr5 161813967 161814210 -41271322 - MIR SINE MIR -1 261 8 291 28 0 0 chr5 161814704 161814740 -41270792 + (TG)n Simple_repeat Simple_repeat 1 36 0 436 257 40 0 chr5 161814980 161815081 -41270451 - L2 LINE L2 -1 3312 3208 307 268 31 0 chr5 161815690 161815787 -41269745 + MER117 DNA MER1_type 1 100 -97 274 289 111 71 chr5 161815863 161816088 -41269444 + L3 LINE CR1 736 969 -608 320 109 0 18 chr5 161816744 161816799 -41268733 + (ATG)n Simple_repeat Simple_repeat 2 55 0 1881 119 11 7 chr5 161818245 161818522 -41267010 + AluSx SINE Alu 1 278 -34 303 85 0 0 chr5 161818527 161818574 -41266958 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1694 79 0 0 chr5 161819005 161819232 -41266300 + L1PA12 LINE L1 5942 6168 0 565 69 0 49 chr5 161819263 161819365 -41266167 - L1PA15 LINE L1 0 6165 6069 312 176 0 81 chr5 161819551 161819625 -41265907 - L2 LINE L2 0 3313 3246 1327 249 110 55 chr5 161819656 161820218 -41265314 - MLT1G1 LTR MaLR -2 593 1 363 23 0 0 chr5 161820711 161820755 -41264777 + (CA)n Simple_repeat Simple_repeat 1 44 0 321 289 140 51 chr5 161821056 161821506 -41264026 + L1MC/D LINE L1 5298 5787 -2021 23 33 0 0 chr5 161822420 161822450 -41263082 + AT_rich Low_complexity Low_complexity 1 30 0 2432 57 3 0 chr5 161822678 161822975 -41262557 + AluY SINE Alu 3 300 -11 4204 84 31 10 chr5 161823197 161823801 -41261731 - L1PA10 LINE L1 0 6168 5552 297 338 53 14 chr5 161823953 161824234 -41261298 + L1MC4a LINE L1 5610 5901 -1907 417 243 62 21 chr5 161825335 161825479 -41260053 + MER103 DNA DNA 8 157 -9 2265 170 111 19 chr5 161825600 161826076 -41259456 + MLT2B1 LTR ERVL 1 520 0 242 259 24 47 chr5 161827013 161827098 -41258434 + MIR SINE MIR 167 249 -13 251 122 20 0 chr5 161827108 161827157 -41258375 + (CAT)n Simple_repeat Simple_repeat 2 51 0 277 336 75 5 chr5 161827333 161827476 -41258056 + MIR SINE MIR 2 150 -63 1522 205 58 0 chr5 161827477 161827770 -41257762 + AluJo SINE Alu 1 310 -2 277 222 47 0 chr5 161828574 161828664 -41256868 + L1MC/D LINE L1 5700 5795 -564 306 237 41 41 chr5 161828787 161828884 -41256648 - MIR SINE MIR 0 262 166 2086 116 3 0 chr5 161830027 161830312 -41255220 - AluSx SINE Alu -25 287 2 746 319 26 47 chr5 161830312 161830678 -41254854 + L1ME2 LINE L1 3441 3788 -2358 1607 132 0 8 chr5 161830678 161830913 -41254619 - AluSg/x SINE Alu -12 298 66 746 319 26 47 chr5 161830913 161831226 -41254306 + L1ME2 LINE L1 3788 4106 -2040 874 324 20 22 chr5 161831351 161831737 -41253795 + MLT1I LTR MaLR 55 409 0 850 322 64 53 chr5 161831737 161833420 -41252112 + L1ME2 LINE L1 4181 5890 -274 238 302 0 0 chr5 161834099 161834152 -41251380 + L1ME LINE L1 5607 5659 -511 232 243 27 45 chr5 161834240 161834351 -41251181 + L1M1 LINE L1 5717 5825 -477 682 322 50 4 chr5 161834644 161834883 -41250649 - MIR SINE MIR 0 262 13 426 20 0 0 chr5 161835214 161835265 -41250267 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 149 0 0 chr5 161835292 161835339 -41250193 - U7 snRNA snRNA -15 48 2 24 0 0 0 chr5 161837064 161837088 -41248444 + AT_rich Low_complexity Low_complexity 1 24 0 1192 303 64 47 chr5 161837110 161837588 -41247944 - L1MEd LINE L1 -1811 4318 3850 1896 117 94 23 chr5 161837588 161837938 -41247594 - THE1C LTR MaLR 0 375 1 1192 303 64 47 chr5 161837938 161838111 -41247421 - L1MEd LINE L1 -2279 3850 3681 1960 124 0 4 chr5 161838111 161838386 -41247146 - AluSx SINE Alu -6 306 33 1192 303 64 47 chr5 161838386 161838729 -41246803 - L1MEd LINE L1 -2448 3681 3306 2628 237 72 24 chr5 161838746 161839547 -41245985 - L1ME1 LINE L1 -14 6152 5313 1147 107 23 0 chr5 161839611 161839788 -41245744 - HSMAR2 DNA Mariner -1 1301 1121 865 170 0 0 chr5 161839788 161839923 -41245609 - FLAM_C SINE Alu -8 135 1 3132 106 18 10 chr5 161839928 161840447 -41245085 - HSMAR2 DNA Mariner -173 1129 570 1450 99 0 5 chr5 161840445 161840658 -41244874 - HSMAR2 DNA Mariner -1086 216 5 * 233 67 0 0 chr5 161840661 161840691 -41244841 - L1ME1 LINE L1 -875 5271 5242 2120 134 0 0 chr5 161840701 161841006 -41244526 - AluSq SINE Alu -8 305 1 238 277 0 47 chr5 161841042 161841190 -41244342 - L1MEd LINE L1 -2833 3296 3156 5189 153 21 8 chr5 161841322 161842254 -41243278 - L1MA9 LINE L1 -23 6289 5345 2252 97 0 0 chr5 161842256 161842546 -41242986 - AluSg SINE Alu -20 290 1 620 255 84 51 chr5 161842789 161843472 -41242060 - L1MEd LINE L1 -4886 1233 606 366 304 85 89 chr5 161843555 161843992 -41241540 - L1MEd LINE L1 -5581 538 104 195 167 0 0 chr5 161843993 161844035 -41241497 + (TG)n Simple_repeat Simple_repeat 1 42 0 967 282 161 15 chr5 161844181 161844701 -41240831 + L2 LINE L2 2712 3309 -4 281 255 133 10 chr5 161846135 161846233 -41239299 - L2 LINE L2 -5 3308 3199 521 303 56 7 chr5 161846800 161846942 -41238590 - L2 LINE L2 -1 3271 3123 351 275 30 30 chr5 161847109 161847244 -41238288 + MIR SINE MIR 45 183 -57 214 318 35 12 chr5 161847556 161847641 -41237891 + L2 LINE L2 3186 3272 0 316 270 9 9 chr5 161848192 161848303 -41237229 + L1MC/D LINE L1 5688 5798 -2010 2592 32 3 0 chr5 161848582 161848890 -41236642 + AluYa5 SINE Alu 1 309 -2 308 286 253 46 chr5 161850124 161850686 -41234846 + L2 LINE L2 1787 2464 -850 300 378 20 27 chr5 161850776 161850924 -41234608 + L2 LINE L2 3119 3265 -7 481 343 155 10 chr5 161851519 161851816 -41233716 - L3 LINE CR1 -7 1570 1231 271 311 40 0 chr5 161851905 161851979 -41233553 + L2 LINE L2 3193 3269 -3 1497 259 43 16 chr5 161852050 161852682 -41232850 + L1ME3 LINE L1 5291 5939 -223 411 257 73 39 chr5 161853153 161853332 -41232200 + MLT1L LTR MaLR 207 391 -224 390 398 19 9 chr5 161853544 161853760 -41231772 - L3 LINE CR1 -448 1129 912 2281 101 7 0 chr5 161855975 161856271 -41229261 + AluSx SINE Alu 1 298 -14 1401 167 4 0 chr5 161856656 161856883 -41228649 - AluJb SINE Alu -18 294 67 461 47 16 0 chr5 161857502 161857566 -41227966 + (TCTA)n Simple_repeat Simple_repeat 1 65 0 503 276 231 5 chr5 161857594 161857797 -41227735 - MIR SINE MIR -12 250 2 339 312 81 29 chr5 161858158 161858331 -41227201 - L1MC4a LINE L1 -1906 5971 5790 406 292 104 0 chr5 161858499 161858643 -41226889 + MIR SINE MIR 2 160 -102 * 894 210 125 9 chr5 161858627 161858851 -41226681 - MIR SINE MIR 0 262 13 508 271 0 0 chr5 161859435 161859557 -41225975 - MIR SINE MIR -51 211 90 598 264 88 19 chr5 161859616 161859832 -41225700 + MIR SINE MIR 21 251 -11 2306 105 0 0 chr5 161860239 161860534 -41224998 - AluSx SINE Alu -17 295 1 527 278 12 18 chr5 161860573 161860742 -41224790 - MIR SINE MIR 0 262 95 247 267 97 36 chr5 161861589 161861754 -41223778 + L2 LINE L2 2887 3061 -252 444 147 0 0 chr5 161861772 161861847 -41223685 + Ricksha DNA DNA 9 83 -1963 2613 225 107 52 chr5 161861949 161862838 -41222694 - MSTB2-int LTR MaLR -709 942 5 2641 154 25 5 chr5 161862842 161863290 -41222242 - MSTB2 LTR MaLR 0 457 1 3430 238 68 48 chr5 161863291 161863873 -41221659 - L1MEc LINE L1 -461 5774 5205 2683 175 4 0 chr5 161863873 161864336 -41221196 - L1PB4 LINE L1 -7 6149 5685 3430 238 68 48 chr5 161864336 161865975 -41219557 - L1MEc LINE L1 -1030 5205 1922 182 273 0 0 chr5 161865985 161866029 -41219503 + L2 LINE L2 3270 3313 0 534 225 63 94 chr5 161866212 161866567 -41218965 - MLT1K LTR MaLR -6 582 190 196 299 224 0 chr5 161866752 161866859 -41218673 + MIR3 SINE MIR 58 188 -20 345 254 81 34 chr5 161866859 161867068 -41218464 + L1ME3A LINE L1 5729 5947 -223 814 182 216 4 chr5 161867420 161867651 -41217881 - MLT1F1 LTR MaLR -275 292 13 2592 140 18 24 chr5 161867698 161868156 -41217376 - L1MC1 LINE L1 -9 6324 5870 334 220 132 0 chr5 161868255 161868346 -41217186 - MIR SINE MIR -159 103 1 180 296 91 79 chr5 161868362 161868615 -41216917 - L2 LINE L2 -131 3182 2927 442 243 42 28 chr5 161870078 161870222 -41215310 - MIR SINE MIR 0 262 117 543 145 0 0 chr5 161870313 161870396 -41215136 - AluJ/FLAM SINE Alu -229 83 1 249 333 32 11 chr5 161870725 161870818 -41214714 + L2 LINE L2 2725 2819 -495 47 67 0 0 chr5 161870860 161870949 -41214583 + AT_rich Low_complexity Low_complexity 1 89 0 450 152 179 9 chr5 161871001 161871085 -41214447 + MER44D DNA MER2_type 12 80 -2411 195 42 0 0 chr5 161871085 161871109 -41214423 + (GA)n Simple_repeat Simple_repeat 1 24 0 450 152 179 9 chr5 161871109 161871136 -41214396 + MER44D DNA MER2_type 80 412 -197 733 110 25 17 chr5 161871143 161871261 -41214271 - FLAM_C SINE Alu -14 129 11 1052 157 5 0 chr5 161871263 161871448 -41214084 + MER44D DNA MER2_type 421 606 -3 3250 174 33 14 chr5 161871530 161872230 -41213302 - L1MC3 LINE L1 -2 7783 7071 237 328 0 0 chr5 161872331 161872392 -41213140 + MIR3 SINE MIR 129 189 -19 1817 122 45 28 chr5 161872413 161872699 -41212833 - AluSx SINE Alu -21 291 1 2363 168 44 0 chr5 161872873 161873283 -41212249 + MSTB1 LTR MaLR 5 432 0 241 85 0 43 chr5 161874444 161874491 -41211041 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 372 277 155 13 chr5 161875166 161875321 -41210211 + MIR3 SINE MIR 30 206 -2 1170 170 45 17 chr5 161875741 161876029 -41209503 + MER33 DNA MER1_type 5 300 -24 273 351 152 25 chr5 161876697 161877093 -41208439 + L2 LINE L2 2827 3272 0 233 302 191 16 chr5 161877691 161877817 -41207715 + L2 LINE L2 3164 3311 -2 1871 130 15 0 chr5 161877883 161878153 -41207379 + AluSx SINE Alu 23 296 -16 427 252 224 14 chr5 161879042 161879189 -41206343 + MIR SINE MIR 66 243 -19 738 196 189 53 chr5 161879342 161879418 -41206114 - MSTD LTR MaLR 0 396 332 2179 121 0 0 chr5 161879418 161879707 -41205825 + AluSg SINE Alu 1 289 -21 738 196 189 53 chr5 161879707 161879894 -41205638 - MSTD LTR MaLR -64 332 97 2231 115 28 20 chr5 161879894 161880250 -41205282 - THE1B LTR MaLR 0 364 6 419 233 0 0 chr5 161880253 161880339 -41205193 - MSTD LTR MaLR -324 104 19 21 0 0 0 chr5 161880550 161880571 -41204961 + AT_rich Low_complexity Low_complexity 1 21 0 210 267 33 0 chr5 161880636 161880696 -41204836 + GA-rich Low_complexity Low_complexity 3 64 0 397 242 45 45 chr5 161881255 161881387 -41204145 + MER5A DNA MER1_type 53 184 -5 240 125 0 50 chr5 161881582 161881622 -41203910 - L2 LINE L2 -8 3264 3227 1120 174 9 5 chr5 161881702 161881914 -41203618 + Tigger4(Zombi) DNA MER2_type 1 213 -2518 1161 91 32 5 chr5 161881914 161882100 -41203432 + Tigger4(Zombi) DNA MER2_type 1963 2153 -578 205 250 0 33 chr5 161882900 161882960 -41202572 + (CATA)n Simple_repeat Simple_repeat 2 59 0 426 339 38 51 chr5 161882962 161883275 -41202257 - L2 LINE L2 0 3313 3005 196 375 40 11 chr5 161883373 161883549 -41201983 - L2 LINE L2 -362 2952 2772 661 230 0 43 chr5 161885592 161885753 -41199779 - L2 LINE L2 0 3313 3160 348 290 38 0 chr5 161885788 161885919 -41199613 + L2 LINE L2 2662 2797 -517 325 326 109 7 chr5 161886172 161886319 -41199213 + MIR SINE MIR 91 252 -10 801 205 148 14 chr5 161887042 161887252 -41198280 + MIR SINE MIR 15 252 -10 185 189 0 0 chr5 161887359 161887396 -41198136 + L2 LINE L2 3275 3311 -2 774 279 18 14 chr5 161888544 161888766 -41196766 + MIR SINE MIR 40 262 0 245 313 53 0 chr5 161888876 161889026 -41196506 - L1ME3A LINE L1 -7 6163 6006 2177 224 75 41 chr5 161889094 161890299 -41195233 - L1ME3 LINE L1 -90 6072 4831 2218 129 3 0 chr5 161890361 161890655 -41194877 + AluSx SINE Alu 1 295 -17 687 239 32 32 chr5 161891087 161891275 -41194257 - MER117 DNA MER1_type -5 192 5 186 43 0 0 chr5 161891431 161891454 -41194078 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 446 275 162 40 chr5 161891756 161891978 -41193554 + MIR SINE MIR 12 260 -2 2096 141 0 3 chr5 161892066 161892378 -41193154 - AluY SINE Alu 0 311 1 449 280 100 67 chr5 161892788 161893027 -41192505 - MIR SINE MIR -14 248 2 746 159 45 0 chr5 161893210 161893342 -41192190 - MER5A DNA MER1_type 0 189 52 306 245 0 82 chr5 161893342 161893440 -41192092 - L1MC4 LINE L1 -1339 6703 6614 304 281 22 0 chr5 161893402 161893491 -41192041 + L1MC4 LINE L1 6614 6704 -1338 * 243 190 0 0 chr5 161893495 161893553 -41191979 + (TA)n Simple_repeat Simple_repeat 1 58 0 2551 95 41 8 chr5 161893570 161893961 -41191571 - MLT2A1 LTR ERVL -40 404 1 317 136 0 0 chr5 161893961 161894005 -41191527 - MER5A DNA MER1_type -145 44 1 298 197 45 15 chr5 161895038 161895104 -41190428 - L2 LINE L2 -17 3255 3188 206 275 200 0 chr5 161895116 161895196 -41190336 + MIR SINE MIR 48 143 -119 245 316 13 0 chr5 161895317 161895393 -41190139 + L2 LINE L2 3236 3312 -1 422 261 59 80 chr5 161896284 161896522 -41189010 - MER102b DNA MER1_type -14 327 95 372 264 11 11 chr5 161896732 161896823 -41188709 + MIR SINE MIR 2 92 -170 243 222 28 42 chr5 161896858 161896930 -41188602 - L2 LINE L2 -12 3301 3231 459 314 33 0 chr5 161897665 161897818 -41187714 + MIR SINE MIR 102 259 -3 223 303 0 15 chr5 161897978 161898044 -41187488 + (CACCAT)n Simple_repeat Simple_repeat 1 65 0 475 307 40 35 chr5 161898056 161898284 -41187248 - MIR SINE MIR -14 248 20 753 250 75 25 chr5 161899190 161899390 -41186142 + MIR SINE MIR 32 241 -21 2044 257 104 35 chr5 161899435 161900572 -41184960 + L2 LINE L2 2119 3312 -1 236 275 38 25 chr5 161900608 161900688 -41184844 + MIR3 SINE MIR 125 205 -3 957 237 120 56 chr5 161900891 161901359 -41184173 + LTR33 LTR ERVL 6 503 -18 1970 164 6 3 chr5 161901433 161901744 -41183788 + AluJo SINE Alu 1 312 0 186 133 0 0 chr5 161902364 161902394 -41183138 + (A)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr5 161902521 161902554 -41182978 + AT_rich Low_complexity Low_complexity 1 33 0 186 43 0 0 chr5 161903294 161903317 -41182215 + (TG)n Simple_repeat Simple_repeat 2 24 0 634 82 0 8 chr5 161903383 161903617 -41181915 + AluSg SINE Alu 1 310 0 437 250 108 37 chr5 161903742 161904200 -41181332 + L1MC4a LINE L1 5079 5560 -747 500 231 17 8 chr5 161904316 161904416 -41181116 - MLT1E2 LTR MaLR -58 568 468 2260 95 57 31 chr5 161904416 161904765 -41180767 - THE1B LTR MaLR 0 364 7 1474 245 58 19 chr5 161904864 161905292 -41180240 - MLT1E2 LTR MaLR -179 447 3 198 328 0 0 chr5 161905399 161905457 -41180075 - MIR SINE MIR -198 64 7 2788 228 175 40 chr5 161905878 161907459 -41178073 - L2 LINE L2 -16 3297 1522 216 0 0 0 chr5 161907655 161907679 -41177853 + (T)n Simple_repeat Simple_repeat 1 24 0 238 250 51 98 chr5 161909043 161909279 -41176253 + MLT1L LTR MaLR 206 434 -158 6205 88 5 5 chr5 161909377 161910223 -41175309 - L1PB2 LINE L1 -5 6146 5301 365 73 0 0 chr5 161910289 161910346 -41175186 - L1PB2 LINE L1 -855 5296 5240 246 232 0 0 chr5 161910355 161910411 -41175121 + MLT1K LTR MaLR 517 572 -16 21 36 0 0 chr5 161910497 161910525 -41175007 + AT_rich Low_complexity Low_complexity 1 28 0 217 302 0 0 chr5 161911146 161911199 -41174333 + CT-rich Low_complexity Low_complexity 3 55 0 280 300 129 6 chr5 161912039 161912209 -41173323 - L2 LINE L2 -3 3310 3120 756 248 81 48 chr5 161912486 161912821 -41172711 + L1MC4a LINE L1 5566 5911 -1897 390 91 0 0 chr5 161912869 161912924 -41172608 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 916 100 16 4 chr5 161913154 161913300 -41172232 + L1PA13 LINE L1 5505 5648 -515 1333 119 14 6 chr5 161913302 161913595 -41171937 + THE1C LTR MaLR 1 375 0 3910 99 2 0 chr5 161913595 161914108 -41171424 + L1PA13 LINE L1 5646 6159 -4 482 315 56 5 chr5 161914624 161914821 -41170711 + MIR SINE MIR 28 234 -28 2171 96 7 0 chr5 161915125 161915407 -41170125 - AluSx SINE Alu -16 296 13 562 191 92 7 chr5 161915421 161915562 -41169970 - L1MA9 LINE L1 -1 6311 6159 243 0 0 0 chr5 161915661 161915688 -41169844 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1961 132 4 0 chr5 161915690 161915970 -41169562 - AluSx SINE Alu -31 281 1 2382 126 36 20 chr5 161916009 161916367 -41169165 - THE1B LTR MaLR 0 364 1 1996 123 7 7 chr5 161916491 161916830 -41168702 + AluSq SINE Alu 1 339 0 670 235 50 11 chr5 161917255 161917434 -41168098 + MIR SINE MIR 77 262 0 275 260 135 0 chr5 161917472 161917568 -41167964 - MIR SINE MIR -98 164 56 318 50 0 0 chr5 161918117 161918157 -41167375 + (A)n Simple_repeat Simple_repeat 1 40 0 471 299 101 45 chr5 161918302 161918590 -41166942 - L2 LINE L2 -2 3311 3008 190 281 18 0 chr5 161918669 161918726 -41166806 - L2 LINE L2 0 3313 3256 386 270 270 5 chr5 161919605 161919794 -41165738 + MIR SINE MIR 2 240 -22 870 238 0 24 chr5 161920037 161920205 -41165327 - FRAM SINE Alu -13 163 1 327 146 0 0 chr5 161921046 161921101 -41164431 + (TG)n Simple_repeat Simple_repeat 2 56 0 21 57 0 0 chr5 161922390 161922425 -41163107 + AT_rich Low_complexity Low_complexity 1 35 0 712 290 18 0 chr5 161922476 161922693 -41162839 - MIR SINE MIR -1 261 41 412 299 14 35 chr5 161922890 161923034 -41162498 + L2 LINE L2 3173 3313 0 448 250 41 33 chr5 161923193 161923434 -41162098 + MER41B LTR ERV1 54 430 -205 1053 249 20 4 chr5 161923853 161924106 -41161426 + MIR SINE MIR 3 259 -3 2178 130 3 9 chr5 161924213 161924535 -41160997 - L1MC1 LINE L1 -2 6331 6012 338 239 43 33 chr5 161924910 161925002 -41160530 + Charlie7 DNA MER1_type 1 93 -2519 240 197 156 16 chr5 161925029 161925151 -41160381 + Charlie7 DNA MER1_type 2443 2581 -31 24 67 0 0 chr5 161925287 161925332 -41160200 + AT_rich Low_complexity Low_complexity 1 45 0 363 231 44 22 chr5 161925334 161925425 -41160107 + L2 LINE L2 3180 3272 0 487 237 74 30 chr5 161926159 161926294 -41159238 - MER102b DNA MER1_type -200 141 1 193 367 0 0 chr5 161927095 161927174 -41158358 - MIR3 SINE MIR -40 168 90 200 275 87 0 chr5 161927257 161927326 -41158206 + MIR SINE MIR 118 192 -70 437 254 107 0 chr5 161927566 161927688 -41157844 + MIR SINE MIR 4 138 -124 550 296 8 0 chr5 161928350 161928482 -41157050 + L2 LINE L2 3139 3271 -1 2380 92 0 3 chr5 161928838 161929143 -41156389 + AluSg SINE Alu 1 304 -6 873 290 182 33 chr5 161929143 161929560 -41155972 - L2 LINE L2 -77 3236 2883 2149 92 10 30 chr5 161929560 161929864 -41155668 - AluSg SINE Alu -12 298 1 873 290 182 33 chr5 161929864 161930409 -41155123 - L2 LINE L2 -430 2883 2125 409 285 23 0 chr5 161931281 161931411 -41154121 + MIR SINE MIR 37 169 -93 593 284 104 37 chr5 161931857 161932323 -41153209 + L1MC4a LINE L1 5562 6058 -63 216 0 0 0 chr5 161932472 161932496 -41153036 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2395 146 11 24 chr5 161933164 161933533 -41151999 + THE1B LTR MaLR 1 364 0 7534 172 6 4 chr5 161933670 161936043 -41149489 + L1PB1 LINE L1 3772 6151 0 379 275 57 78 chr5 161936234 161936478 -41149054 - L2 LINE L2 -1 3312 3074 308 341 65 8 chr5 161936680 161936803 -41148729 + L2 LINE L2 3143 3272 0 268 198 136 25 chr5 161936824 161936905 -41148627 - L1ME3A LINE L1 -30 6140 6051 2427 232 64 57 chr5 161936909 161937422 -41148110 - L1ME3A LINE L1 -529 5633 5125 2130 101 39 0 chr5 161937422 161937708 -41147824 - AluSc SINE Alu -12 297 1 2427 232 64 57 chr5 161937708 161938489 -41147043 - L1ME3A LINE L1 -1037 5125 4321 555 263 56 11 chr5 161938720 161938899 -41146633 + Charlie8 DNA MER1_type 32 218 -2199 2453 314 92 14 chr5 161938976 161939907 -41145625 + L2 LINE L2 1751 2806 -507 1653 215 57 25 chr5 161939907 161940260 -41145272 - MLT1A1 LTR MaLR 0 365 2 2453 314 92 14 chr5 161940260 161940608 -41144924 + L2 LINE L2 2806 3125 -188 544 113 21 43 chr5 161940608 161940749 -41144783 + CT-rich Low_complexity Low_complexity 1 138 0 1348 207 0 84 chr5 161940749 161941083 -41144449 - AluJb SINE Alu -6 306 1 317 336 55 0 chr5 161941151 161941279 -41144253 + L2 LINE L2 3179 3313 0 5560 94 8 0 chr5 161941778 161942492 -41143040 + L1PA10 LINE L1 5437 6156 -12 2216 116 0 3 chr5 161942520 161942821 -41142711 - AluSx SINE Alu -7 305 6 316 253 110 39 chr5 161944242 161944396 -41141136 - MIR SINE MIR -4 258 94 722 246 27 77 chr5 161944689 161944725 -41140807 - MER97c DNA MER1_type? -3 1087 1051 2220 98 10 0 chr5 161944725 161945020 -41140512 - AluSp SINE Alu -15 298 1 722 246 27 77 chr5 161945020 161945320 -41140212 - MER97c DNA MER1_type? -39 1051 768 1981 218 93 10 chr5 161945636 161946140 -41139392 - MER97a DNA MER1_type? -289 605 60 5492 101 5 23 chr5 161946379 161946489 -41139043 + L1PA13 LINE L1 5380 5490 -673 2899 6 0 0 chr5 161946489 161946800 -41138732 + AluY SINE Alu 1 311 0 5492 101 5 23 chr5 161946800 161947484 -41138048 + L1PA13 LINE L1 5490 6160 -3 3247 98 30 0 chr5 161947484 161947910 -41137622 + L1PA11 LINE L1 5734 6174 0 326 294 124 17 chr5 161948125 161948302 -41137230 - MER117 DNA MER1_type 0 197 2 2063 137 3 7 chr5 161948587 161948893 -41136639 - AluSx SINE Alu -7 305 1 262 218 13 64 chr5 161949390 161949468 -41136064 + MIR3 SINE MIR 93 166 -42 898 200 16 32 chr5 161949483 161949668 -41135864 + MIR SINE MIR 63 244 -18 450 136 0 0 chr5 161950109 161950190 -41135342 + (GA)n Simple_repeat Simple_repeat 2 82 0 1069 128 0 0 chr5 161950445 161950629 -41134903 + AluSg/x SINE Alu 136 319 0 776 285 72 17 chr5 161951328 161951563 -41133969 - MIR SINE MIR -8 254 7 1347 227 58 44 chr5 161951896 161952489 -41133043 - L2 LINE L2 0 3313 2701 458 289 73 15 chr5 161952501 161952774 -41132758 - L1MC4a LINE L1 -1907 5901 5613 7289 22 2 3 chr5 161952847 161953709 -41131823 + L1PA4 LINE L1 5292 6152 -3 313 271 23 54 chr5 161953725 161953854 -41131678 - L1MC4a LINE L1 -541 5580 5456 222 158 26 0 chr5 161955008 161955046 -41130486 + L2 LINE L2 3268 3306 -7 286 327 29 10 chr5 161956195 161956299 -41129233 + L2 LINE L2 2713 2818 -496 390 229 25 8 chr5 161956302 161956316 -41129216 - L1MA10 LINE L1 -1 6333 6320 1107 249 39 54 chr5 161956316 161956778 -41128754 - L1ME1 LINE L1 -9 6157 5703 271 177 16 0 chr5 161956827 161956889 -41128643 + MER113 DNA MER1_type? 150 212 -309 231 36 0 0 chr5 161957009 161957037 -41128495 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 248 292 15 15 chr5 161957312 161957377 -41128155 - L2 LINE L2 -50 3222 3158 4233 166 109 20 chr5 161957499 161958354 -41127178 - MER21A LTR ERV1 0 931 1 723 276 62 52 chr5 161958919 161959340 -41126192 + MLT1L LTR MaLR 23 447 -168 960 307 169 25 chr5 161959440 161960043 -41125489 + L3 LINE CR1 787 1476 -101 196 354 91 47 chr5 161960065 161960319 -41125213 - L2 LINE L2 -16 3256 2992 409 210 14 0 chr5 161960376 161960519 -41125013 + GA-rich Low_complexity Low_complexity 3 147 0 2364 103 3 0 chr5 161960855 161961166 -41124366 + AluSp SINE Alu 1 312 -1 338 288 47 53 chr5 161961412 161961630 -41123902 + MIR SINE MIR 10 230 -32 370 238 191 18 chr5 161961747 161961915 -41123617 - L2 LINE L2 -4 3309 3113 396 313 182 0 chr5 161963225 161963417 -41122115 - MIR SINE MIR -30 232 6 3163 127 4 6 chr5 161963764 161964253 -41121279 - MER1A DNA MER1_type -41 488 1 1414 74 21 0 chr5 161964805 161964995 -41120537 - L1PA8 LINE L1 -2 6170 5977 338 388 0 8 chr5 161965310 161965439 -41120093 - L2 LINE L2 -1 3271 3144 287 361 82 34 chr5 161965518 161965787 -41119745 - L2 LINE L2 -454 2860 2579 2127 125 0 0 chr5 161965825 161966137 -41119395 - AluSx SINE Alu 0 312 1 292 344 125 48 chr5 161967604 161968043 -41117489 + L2 LINE L2 2451 2923 -391 212 323 31 10 chr5 161968735 161968831 -41116701 + L2 LINE L2 2935 3032 -240 514 274 147 0 chr5 161968844 161969001 -41116531 + MER5A DNA MER1_type 10 189 0 336 200 43 0 chr5 161969260 161969330 -41116202 + MLT1J LTR MaLR 109 181 -330 327 295 11 0 chr5 161970593 161970688 -41114844 - MARNA DNA Mariner -189 397 302 831 214 11 22 chr5 161970914 161971096 -41114436 - MER5A DNA MER1_type 0 189 10 183 283 0 19 chr5 161974400 161974453 -41111079 - MIR SINE MIR -1 261 210 2020 132 0 29 chr5 161974747 161975058 -41110474 + AluSx SINE Alu 1 302 -10 330 322 145 33 chr5 161976105 161976319 -41109213 + MIR SINE MIR 18 255 -7 273 325 15 98 chr5 161976476 161976679 -41108853 + MIR SINE MIR 26 211 -51 404 301 82 27 chr5 161976965 161977184 -41108348 + MIR SINE MIR 31 261 -1 189 316 42 74 chr5 161979444 161979539 -41105993 - L2 LINE L2 -9 3263 3172 593 262 109 97 chr5 161979777 161980578 -41104954 + L1ME4a LINE L1 4359 5168 -978 51 51 0 0 chr5 161980651 161980730 -41104802 + AT_rich Low_complexity Low_complexity 1 79 0 735 263 103 50 chr5 161980756 161981194 -41104338 + L1ME4a LINE L1 5315 5775 -2033 336 275 65 65 chr5 161981211 161981487 -41104045 + L1ME4a LINE L1 5843 6118 -3 31 20 0 20 chr5 161981766 161981785 -41103747 + AT_rich Low_complexity Low_complexity 1 19 -29 273 57 0 0 chr5 161981785 161981820 -41103712 + (CA)n Simple_repeat Simple_repeat 2 36 0 31 20 0 20 chr5 161981820 161981849 -41103683 + AT_rich Low_complexity Low_complexity 19 48 0 234 288 55 27 chr5 161982915 161982988 -41102544 + MIR3 SINE MIR 111 185 -23 807 148 13 41 chr5 161983217 161983398 -41102134 - MER58A DNA MER1_type 0 157 1 1682 183 17 0 chr5 161983812 161984102 -41101430 - AluJb SINE Alu -10 302 8 292 259 19 37 chr5 161984159 161984321 -41101211 + L1MC5 LINE L1 7625 7783 -178 241 260 20 0 chr5 161985344 161985410 -41100122 - MIR SINE MIR -93 115 45 720 210 35 0 chr5 161985417 161985617 -41099915 + MER113 DNA MER1_type? 17 223 -298 267 200 25 38 chr5 161985987 161986067 -41099465 + (TA)n Simple_repeat Simple_repeat 1 79 0 246 345 155 11 chr5 161986531 161986705 -41098827 + MIR SINE MIR 29 227 -35 227 321 252 19 chr5 161986735 161986997 -41098535 - L2 LINE L2 -41 3272 2950 278 330 28 19 chr5 161988333 161988439 -41097093 + L2 LINE L2 3166 3272 0 2354 117 0 0 chr5 161988874 161989182 -41096350 - AluSg SINE Alu 0 310 3 586 219 28 59 chr5 161989381 161989395 -41096137 + MER58A DNA MER1_type 1 14 -2406 2568 123 101 0 chr5 161989395 161989802 -41095730 + MER83 LTR ERV1 1 448 0 586 219 28 59 chr5 161989802 161990087 -41095445 + MER58A DNA MER1_type 14 224 0 772 281 46 8 chr5 161990129 161990367 -41095165 - MIR SINE MIR -10 252 6 1418 188 40 3 chr5 161990865 161991163 -41094369 - L1MA10 LINE L1 -8 6326 6018 533 234 127 19 chr5 161991438 161991596 -41093936 + MIR SINE MIR 70 244 -18 280 315 130 6 chr5 161991909 161992071 -41093461 - MIR SINE MIR -71 191 10 704 255 31 0 chr5 161992444 161992605 -41092927 - MIR SINE MIR -18 244 79 389 167 0 12 chr5 161993005 161993089 -41092443 + (CA)n Simple_repeat Simple_repeat 1 83 0 2606 221 94 50 chr5 161993091 161994015 -41091517 - MER45B DNA AcHobo -38 1002 38 297 200 0 0 chr5 161994017 161994067 -41091465 - MER5A DNA MER1_type -139 50 1 181 260 60 0 chr5 161995351 161995401 -41090131 - MER5A DNA MER1_type -46 143 91 286 170 0 0 chr5 161995568 161995615 -41089917 + MLT1J2 LTR MaLR 278 324 -126 2408 151 54 5 chr5 161995767 161996172 -41089360 - MSTB LTR MaLR 0 426 2 223 315 27 18 chr5 161997524 161997635 -41087897 - L3 LINE CR1 -154 1423 1312 234 193 0 0 chr5 161997972 161998029 -41087503 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 442 333 53 0 chr5 161999361 161999493 -41086039 + L2 LINE L2 3134 3272 0 200 308 25 42 chr5 161999638 161999758 -41085774 + L2 LINE L2 2893 3010 -262 248 317 0 33 chr5 162004436 162004556 -41080976 + MER117 DNA MER1_type 1 116 -81 225 314 92 62 chr5 162004593 162004930 -41080602 + L2 LINE L2 2948 3294 -19 445 250 111 21 chr5 162005282 162005426 -41080106 + MIR SINE MIR 64 220 -42 1782 162 48 3 chr5 162005610 162005900 -41079632 - AluSx SINE Alu -9 303 1 622 318 49 14 chr5 162006515 162006738 -41078794 - MIR SINE MIR -6 256 26 2041 109 51 0 chr5 162006739 162007013 -41078519 - AluSg SINE Alu -18 292 5 282 308 55 0 chr5 162007225 162007316 -41078216 - L2 LINE L2 -17 3296 3201 1376 212 150 70 chr5 162009219 162009275 -41076257 + MER20B DNA MER1_type 1 51 -732 2404 80 0 3 chr5 162009275 162009574 -41075958 + AluY SINE Alu 1 298 -13 1376 212 150 70 chr5 162009574 162010000 -41075532 + MER20B DNA MER1_type 51 563 -220 2420 100 0 0 chr5 162010000 162010299 -41075233 - AluSg SINE Alu -11 299 1 1376 212 150 70 chr5 162010299 162010540 -41074992 + MER20B DNA MER1_type 563 783 0 477 277 154 21 chr5 162011085 162011273 -41074259 + MIR SINE MIR 20 232 -30 196 327 0 0 chr5 162011335 162011390 -41074142 - MIR3 SINE MIR -9 199 145 7578 25 3 0 chr5 162011514 162012878 -41072654 + L1PA3 LINE L1 4784 6152 -3 207 287 109 10 chr5 162013614 162013715 -41071817 + MIR SINE MIR 40 150 -112 1868 266 67 69 chr5 162013972 162015848 -41069684 - L1ME LINE L1 -4347 1914 5 590 277 27 64 chr5 162017182 162017478 -41068054 - L2 LINE L2 -44 3269 2985 2163 118 0 3 chr5 162017821 162018110 -41067422 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr5 162018113 162018136 -41067396 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 216 67 0 0 chr5 162018683 162018713 -41066819 + (A)n Simple_repeat Simple_repeat 1 30 0 209 268 0 0 chr5 162019171 162019212 -41066320 + C-rich Low_complexity Low_complexity 5 45 0 296 260 219 32 chr5 162019212 162019431 -41066101 + MER102a DNA MER1_type 71 330 0 1056 233 0 0 chr5 162021003 162021213 -41064319 + MER58A DNA MER1_type 9 218 -6 2280 114 3 0 chr5 162021213 162021521 -41064011 + AluSq SINE Alu 3 311 -2 242 252 33 69 chr5 162022844 162023025 -41062507 - L2 LINE L2 -1 3312 3168 579 342 17 20 chr5 162023051 162023301 -41062231 + MIR SINE MIR 15 262 0 690 276 50 10 chr5 162023352 162023551 -41061981 + MIR SINE MIR 45 251 -11 394 206 0 22 chr5 162024481 162024595 -41060937 + MLT1K LTR MaLR 485 606 -9 249 269 103 0 chr5 162025332 162025410 -41060122 - MIR SINE MIR -57 205 120 225 0 0 0 chr5 162026328 162026353 -41059179 + (A)n Simple_repeat Simple_repeat 1 25 0 186 172 0 0 chr5 162027127 162027156 -41058376 + L2 LINE L2 3192 3220 -93 475 190 20 10 chr5 162027267 162027367 -41058165 + MER58 DNA MER1_type 2320 2420 0 191 333 0 0 chr5 162027367 162027415 -41058117 + L2 LINE L2 3187 3234 -38 389 243 216 0 chr5 162027747 162027858 -41057674 + MER5A DNA MER1_type 54 188 -1 4663 140 48 15 chr5 162028384 162029184 -41056348 - LTR1B LTR ERV1 0 826 1 361 283 116 35 chr5 162029241 162029414 -41056118 - MIR SINE MIR -74 188 2 1829 139 6 84 chr5 162029690 162030022 -41055510 - AluSx SINE Alu -4 308 3 247 258 15 0 chr5 162031035 162031101 -41054431 + MER103 DNA DNA 49 115 -51 347 376 73 18 chr5 162031138 162031303 -41054229 - MIR3 SINE MIR -22 186 13 252 305 72 24 chr5 162031398 162031532 -41054000 + MIR SINE MIR 27 158 -50 2103 129 36 12 chr5 162031752 162032086 -41053446 + MER2 DNA MER2_type 3 344 0 1580 219 131 9 chr5 162033701 162034135 -41051397 + MLT1E LTR MaLR 1 487 -106 499 168 0 11 chr5 162034417 162034512 -41051020 + MLT1E LTR MaLR 500 593 0 409 337 198 5 chr5 162035901 162036103 -41049429 + MIR SINE MIR 22 262 0 21 36 0 0 chr5 162036150 162036178 -41049354 + AT_rich Low_complexity Low_complexity 1 28 0 21 89 0 0 chr5 162036257 162036313 -41049219 + AT_rich Low_complexity Low_complexity 1 56 0 345 333 70 0 chr5 162036548 162036704 -41048828 - MIR SINE MIR -29 233 67 1447 133 205 0 chr5 162036857 162037106 -41048426 - AluJb SINE Alu -12 300 1 218 122 0 24 chr5 162037301 162037342 -41048190 + (TAAAAA)n Simple_repeat Simple_repeat 3 42 0 344 250 250 13 chr5 162037785 162037941 -41047591 + MIR SINE MIR 51 243 -19 608 259 40 73 chr5 162039281 162039528 -41046004 + MIR SINE MIR 8 246 -16 334 309 114 20 chr5 162039989 162040138 -41045394 + MIR SINE MIR 30 192 -70 1366 194 101 18 chr5 162040198 162040642 -41044890 - Charlie1b DNA MER1_type -5 518 38 453 297 0 8 chr5 162041094 162041222 -41044310 + MIR SINE MIR 21 147 -115 606 234 104 29 chr5 162041222 162041513 -41044019 + MLT1H LTR MaLR 1 355 -194 279 187 120 27 chr5 162041630 162041705 -41043827 - MER81 DNA DNA -32 82 1 2097 141 3 3 chr5 162043410 162043714 -41041818 - AluSx SINE Alu -8 304 1 2506 62 0 7 chr5 162043742 162044050 -41041482 + AluY SINE Alu 1 306 -5 660 295 100 50 chr5 162044218 162044533 -41040999 + L2 LINE L2 2585 2883 -430 1601 132 114 18 chr5 162044533 162044813 -41040719 + AluSg SINE Alu 1 307 -3 660 295 100 50 chr5 162044813 162045139 -41040393 + L2 LINE L2 2883 3272 -41 599 312 15 10 chr5 162045158 162045363 -41040169 - L2 LINE L2 -625 2689 2484 395 185 74 9 chr5 162045560 162045668 -41039864 - MER94 DNA DNA -19 115 1 8419 230 22 11 chr5 162046430 162050297 -41035235 - L1PA16 LINE L1 -9 6808 2855 2175 144 0 3 chr5 162050297 162050609 -41034923 - AluSx SINE Alu -1 311 1 8419 230 22 11 chr5 162050609 162051078 -41034454 - L1PA16 LINE L1 -3962 2855 2393 2178 102 0 33 chr5 162051081 162051386 -41034146 + AluY SINE Alu 1 295 -16 2557 209 31 19 chr5 162051431 162051605 -41033927 - L1PA16 LINE L1 -4509 2278 2108 1826 188 0 0 chr5 162051605 162051898 -41033634 - AluJb SINE Alu -14 298 6 2312 78 0 0 chr5 162051904 162052207 -41033325 - AluY SINE Alu 0 303 1 2557 209 31 19 chr5 162052207 162052694 -41032838 - L1PA16 LINE L1 -4683 2104 1601 955 277 7 11 chr5 162052739 162053024 -41032508 - L1PA16 LINE L1 -5181 1606 1323 387 0 0 0 chr5 162053875 162053918 -41031614 + (A)n Simple_repeat Simple_repeat 1 43 0 719 185 62 56 chr5 162056031 162056209 -41029323 - MER97c DNA MER1_type? -911 179 1 334 246 92 63 chr5 162056747 162056954 -41028578 - MLT1J2 LTR MaLR -237 213 1 1112 186 5 0 chr5 162058331 162058519 -41027013 - MER5A DNA MER1_type 0 189 1 226 130 22 22 chr5 162059188 162059234 -41026298 + Charlie8 DNA MER1_type 1355 1400 -1017 342 352 64 0 chr5 162059253 162059378 -41026154 - MIR SINE MIR -57 151 19 218 186 0 0 chr5 162059723 162059766 -41025766 + A-rich Low_complexity Low_complexity 3 45 0 279 333 113 24 chr5 162059982 162060150 -41025382 - MER5A DNA MER1_type 0 189 7 334 227 102 0 chr5 162060209 162060297 -41025235 - MER5A DNA MER1_type -89 100 4 321 318 28 0 chr5 162060322 162060429 -41025103 + MIR SINE MIR 35 144 -118 1883 148 7 16 chr5 162060473 162060778 -41024754 - AluSq SINE Alu -11 302 1 2300 111 3 0 chr5 162061389 162061686 -41023846 + AluSx SINE Alu 1 298 -14 224 323 166 11 chr5 162061814 162062009 -41023523 - MIR SINE MIR -8 254 31 753 217 54 6 chr5 162062035 162062201 -41023331 - MER5A DNA MER1_type 0 189 16 262 307 80 12 chr5 162063596 162063796 -41021736 + MIR SINE MIR 46 259 -3 6689 115 68 10 chr5 162063878 162065042 -41020490 - Tigger3b DNA MER2_type 0 1231 1 192 354 0 0 chr5 162065795 162065843 -41019689 + L2 LINE L2 3200 3247 -25 185 220 0 17 chr5 162065861 162065920 -41019612 + GA-rich Low_complexity Low_complexity 3 60 0 184 297 27 27 chr5 162066882 162066956 -41018576 + L2 LINE L2 3234 3307 -6 402 354 42 60 chr5 162068427 162068712 -41016820 + L2 LINE L2 2992 3271 -1 223 278 9 96 chr5 162068832 162068947 -41016585 - MIR SINE MIR -85 123 19 198 0 0 0 chr5 162069080 162069102 -41016430 + (TG)n Simple_repeat Simple_repeat 1 22 0 310 100 0 0 chr5 162069499 162069549 -41015983 - MADE1 DNA Mariner -30 50 1 883 280 86 17 chr5 162070034 162070455 -41015077 + LTR16A LTR ERVL 1 450 0 307 303 104 26 chr5 162070632 162070979 -41014553 - L1MC/D LINE L1 -1985 5823 5450 265 301 75 0 chr5 162071675 162071768 -41013764 + MIR SINE MIR 117 216 -46 34 0 0 0 chr5 162071782 162071816 -41013716 + AT_rich Low_complexity Low_complexity 1 34 0 559 192 26 51 chr5 162071907 162072063 -41013469 + MER46C DNA MER2_type 61 212 -126 23 0 0 0 chr5 162072307 162072330 -41013202 + AT_rich Low_complexity Low_complexity 1 23 0 215 130 0 43 chr5 162072505 162072551 -41012981 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2356 77 0 3 chr5 162072766 162073066 -41012466 - AluY SINE Alu -12 299 1 551 257 47 35 chr5 162073427 162073598 -41011934 - Charlie8 DNA MER1_type -2236 181 9 296 330 53 0 chr5 162074161 162074255 -41011277 - L2 LINE L2 0 3313 3215 216 0 0 0 chr5 162075193 162075217 -41010315 + (T)n Simple_repeat Simple_repeat 1 24 0 412 348 32 19 chr5 162075560 162075715 -41009817 - L2 LINE L2 0 3272 3116 231 268 0 0 chr5 162075747 162075803 -41009729 + L2 LINE L2 3001 3056 -216 278 301 106 25 chr5 162075854 162076053 -41009479 + MLT1H1 LTR MaLR 341 555 0 254 270 234 18 chr5 162078079 162078190 -41007342 - L2 LINE L2 -10 3303 3169 363 246 152 52 chr5 162078350 162078541 -41006991 + MIR SINE MIR 47 256 -6 2167 102 0 0 chr5 162078847 162079155 -41006377 + AluSg SINE Alu 1 308 0 2181 125 3 3 chr5 162080418 162080714 -41004818 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr5 162080718 162080741 -41004791 + (T)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr5 162081008 162081028 -41004504 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2212 108 0 7 chr5 162081699 162081995 -41003537 - AluSx SINE Alu -15 297 4 192 339 136 17 chr5 162082391 162082509 -41003023 - L2 LINE L2 -8 3264 3133 373 288 38 30 chr5 162082598 162082730 -41002802 + MIR SINE MIR 63 195 -67 762 202 146 68 chr5 162082904 162083313 -41002219 - LTR50 LTR ERVL -3 792 261 249 57 0 0 chr5 162084435 162084470 -41001062 + (TG)n Simple_repeat Simple_repeat 2 36 0 704 286 103 0 chr5 162085171 162085405 -41000127 - MIR SINE MIR -3 259 2 245 351 45 30 chr5 162085591 162085725 -40999807 + L2 LINE L2 3136 3271 -1 2021 201 159 18 chr5 162085735 162086232 -40999300 - MLT1F1 LTR MaLR 0 567 1 1957 207 43 22 chr5 162087220 162087708 -40997824 - MLT1D LTR MaLR 0 505 8 432 0 0 0 chr5 162087840 162087888 -40997644 + (CAT)n Simple_repeat Simple_repeat 3 50 0 22 35 0 0 chr5 162088340 162088369 -40997163 + AT_rich Low_complexity Low_complexity 1 29 0 480 312 107 9 chr5 162088491 162088706 -40996826 + MIR SINE MIR 20 255 -7 2273 130 30 14 chr5 162089312 162089681 -40995851 - THE1C LTR MaLR 0 375 1 27 29 0 0 chr5 162089976 162090010 -40995522 + AT_rich Low_complexity Low_complexity 1 34 0 348 248 23 138 chr5 162090961 162091179 -40994353 - HAL1b LINE L1 -530 818 626 430 303 62 33 chr5 162091362 162091573 -40993959 - HAL1b LINE L1 -969 379 163 1319 132 50 5 chr5 162092540 162092760 -40992772 - MER30 DNA MER1_type 0 230 1 767 314 62 20 chr5 162093484 162094082 -40991450 + L1ME3 LINE L1 5267 5889 -273 24 0 0 0 chr5 162094714 162094738 -40990794 + AT_rich Low_complexity Low_complexity 1 24 0 2411 136 47 20 chr5 162094979 162095427 -40990105 - MER65C LTR ERV1 0 461 2 750 11 0 0 chr5 162096991 162097136 -40988396 + L1PA2 LINE L1 6045 6189 0 293 316 86 0 chr5 162097295 162097412 -40988120 - MIR3 SINE MIR -50 158 32 823 251 75 5 chr5 162097491 162097690 -40987842 - MIR SINE MIR -22 240 28 187 325 60 12 chr5 162097698 162097781 -40987751 - MIR3 SINE MIR -11 197 111 2240 126 19 39 chr5 162097986 162098400 -40987132 - MSTA LTR MaLR 0 428 23 364 279 114 58 chr5 162099274 162099582 -40985950 + MER102b DNA MER1_type 17 341 0 562 277 34 7 chr5 162100447 162100595 -40984937 + MIR3 SINE MIR 42 193 -15 1596 176 10 36 chr5 162101002 162101304 -40984228 + AluJo SINE Alu 1 294 -18 2071 99 38 3 chr5 162101749 162102041 -40983491 + AluSg SINE Alu 1 302 -8 388 169 0 0 chr5 162102383 162102454 -40983078 - MLT2B1 LTR ERVL 0 520 450 694 132 97 0 chr5 162102458 162102580 -40982952 - L1MA4 LINE L1 -3 6297 6158 351 0 0 0 chr5 162102580 162102619 -40982913 + (TG)n Simple_repeat Simple_repeat 2 40 0 694 132 97 0 chr5 162102619 162102640 -40982892 - L1MA4 LINE L1 -142 6158 6140 1585 142 17 54 chr5 162102661 162102957 -40982575 - MER1B DNA MER1_type 0 339 55 864 122 14 0 chr5 162102957 162103104 -40982428 - MLT2B1 LTR ERVL -371 149 1 388 307 53 0 chr5 162103317 162103431 -40982101 + MIR SINE MIR 25 144 -64 22 0 0 0 chr5 162103447 162103469 -40982063 + AT_rich Low_complexity Low_complexity 1 22 0 2018 115 6 45 chr5 162103807 162103977 -40981555 - AluSg SINE Alu -8 302 148 2276 78 10 19 chr5 162103977 162104284 -40981248 - AluY SINE Alu -7 304 1 2018 115 6 45 chr5 162104284 162104427 -40981105 - AluSg SINE Alu -162 148 1 3650 91 0 0 chr5 162104576 162105080 -40980452 + L1PA13 LINE L1 5659 6162 -1 211 290 50 20 chr5 162105413 162105513 -40980019 - L2 LINE L2 -588 2726 2624 361 249 58 40 chr5 162105578 162105751 -40979781 + MLT1J2 LTR MaLR 20 195 -251 414 281 94 0 chr5 162105767 162105927 -40979605 + MLT1J1 LTR MaLR 270 444 -2 2401 78 7 7 chr5 162106154 162106463 -40979069 - AluSq SINE Alu -4 309 1 344 317 110 6 chr5 162106537 162106701 -40978831 - L2 LINE L2 0 3313 3133 607 259 50 35 chr5 162106746 162106947 -40978585 - MIR SINE MIR -3 259 56 389 66 16 0 chr5 162106951 162107012 -40978520 + (TG)n Simple_repeat Simple_repeat 2 63 0 2039 196 31 41 chr5 162107884 162108393 -40977139 + MLT1D LTR MaLR 1 504 -1 642 203 66 41 chr5 162109107 162109349 -40976183 - MER113 DNA MER1_type? 0 521 274 627 227 13 0 chr5 162109352 162109506 -40976026 - L1MA10 LINE L1 -3 6331 6176 5641 220 69 15 chr5 162109530 162111873 -40973659 - L1ME1 LINE L1 -166 6000 3550 644 249 22 39 chr5 162111874 162112103 -40973429 - LTR9 LTR ERV1 0 612 388 744 101 0 76 chr5 162112103 162112222 -40973310 + AluSg/x SINE Alu 164 273 -39 450 36 0 0 chr5 162112222 162112278 -40973254 + (TC)n Simple_repeat Simple_repeat 2 57 0 345 270 22 0 chr5 162112282 162112371 -40973161 - L1MC4 LINE L1 -1339 6703 6613 597 174 42 26 chr5 162112460 162112650 -40972882 - MER113 DNA MER1_type? -323 198 6 313 284 0 0 chr5 162113339 162113413 -40972119 + L2 LINE L2 3185 3258 -14 202 197 45 0 chr5 162113415 162113481 -40972051 + GA-rich Low_complexity Low_complexity 4 72 0 282 254 144 51 chr5 162113503 162113621 -40971911 + L2 LINE L2 3185 3313 0 306 227 36 64 chr5 162113750 162113860 -40971672 - L2 LINE L2 -197 3075 2969 606 301 134 75 chr5 162114391 162114852 -40970680 + L2 LINE L2 2776 3271 -1 2544 49 0 19 chr5 162114981 162115288 -40970244 - AluY SINE Alu -10 301 1 595 322 28 0 chr5 162116051 162116231 -40969301 + MIR SINE MIR 28 212 -50 475 291 61 0 chr5 162116414 162116562 -40968970 + MIR SINE MIR 40 196 -66 190 421 21 0 chr5 162116658 162116753 -40968779 - MER5B DNA MER1_type -81 97 1 207 0 0 0 chr5 162117883 162117906 -40967626 + (T)n Simple_repeat Simple_repeat 1 23 0 498 366 22 0 chr5 162118325 162118549 -40966983 - MIR SINE MIR -28 234 6 414 204 0 0 chr5 162118782 162118870 -40966662 + (TCCA)n Simple_repeat Simple_repeat 3 90 0 698 202 0 0 chr5 162118916 162119035 -40966497 + FLAM_C SINE Alu 2 120 -13 497 310 12 112 chr5 162119064 162119322 -40966210 - L2 LINE L2 -43 3229 2998 327 304 0 0 chr5 162119331 162119423 -40966109 - MIR SINE MIR -3 259 168 581 308 123 13 chr5 162119523 162119831 -40965701 - L2 LINE L2 -431 2883 2542 287 277 0 0 chr5 162121199 162121264 -40964268 + CT-rich Low_complexity Low_complexity 2 66 0 261 268 275 0 chr5 162121545 162121687 -40963845 + MIR SINE MIR 82 262 0 650 219 142 62 chr5 162121958 162122374 -40963158 - MER113 DNA MER1_type? -72 449 1 253 320 139 8 chr5 162123017 162123139 -40962393 - MIR SINE MIR -120 142 5 863 153 0 0 chr5 162123193 162123311 -40962221 - AluJb SINE Alu -194 118 1 212 296 0 57 chr5 162124559 162124647 -40960885 - L2 LINE L2 -1 3271 3189 2081 139 7 3 chr5 162125330 162125639 -40959893 + AluSx SINE Alu 1 310 -2 234 0 0 0 chr5 162125664 162125690 -40959842 + (T)n Simple_repeat Simple_repeat 1 26 0 1016 168 0 0 chr5 162127342 162127538 -40957994 + L1MA5 LINE L1 6105 6300 0 22 56 0 0 chr5 162127634 162127670 -40957862 + AT_rich Low_complexity Low_complexity 1 36 0 2099 117 0 17 chr5 162127674 162127965 -40957567 + AluSg SINE Alu 1 286 -24 612 289 18 62 chr5 162128168 162128441 -40957091 + MIR SINE MIR 2 262 0 265 164 27 0 chr5 162128751 162128824 -40956708 + (TA)n Simple_repeat Simple_repeat 1 75 0 2502 223 52 19 chr5 162129866 162130539 -40954993 - L1ME1 LINE L1 -24 6142 5448 470 270 79 7 chr5 162130542 162130694 -40954838 - MIR SINE MIR -72 190 28 400 333 29 16 chr5 162132012 162132268 -40953264 + L1ME LINE L1 4939 5202 -944 368 295 89 31 chr5 162132335 162132800 -40952732 + L1ME LINE L1 5268 5754 -408 514 224 31 38 chr5 162133554 162133763 -40951769 + L1MC4a LINE L1 5713 5818 -303 31 58 0 0 chr5 162134019 162134071 -40951461 + AT_rich Low_complexity Low_complexity 1 52 0 54 16 0 0 chr5 162134198 162134259 -40951273 + AT_rich Low_complexity Low_complexity 1 61 0 258 254 70 49 chr5 162134276 162134418 -40951114 - MARNA DNA Mariner -26 560 416 1077 198 131 71 chr5 162134446 162134542 -40950990 + Charlie4a DNA MER1_type 16 105 -1856 2547 71 0 0 chr5 162134542 162134853 -40950679 + AluY SINE Alu 1 311 0 1077 198 131 71 chr5 162134853 162135206 -40950326 + Charlie4a DNA MER1_type 105 492 -16 268 219 0 0 chr5 162135313 162135377 -40950155 + MARNA DNA Mariner 313 376 -210 1545 153 16 73 chr5 162135410 162135723 -40949809 - AluJo SINE Alu -17 295 1 562 280 92 14 chr5 162135792 162136010 -40949522 - L2 LINE L2 -4 3309 3075 470 318 40 6 chr5 162136026 162136199 -40949333 + MIR SINE MIR 12 190 -72 277 225 81 96 chr5 162136593 162136802 -40948730 - L2 LINE L2 -1 3312 3107 480 290 40 30 chr5 162136833 162137033 -40948499 - L2 LINE L2 -568 2746 2545 219 230 115 35 chr5 162137103 162137190 -40948342 - MIR3 SINE MIR -21 187 94 250 289 0 33 chr5 162137287 162137377 -40948155 + GA-rich Low_complexity Low_complexity 2 88 0 244 336 48 0 chr5 162137786 162137932 -40947600 - MIR SINE MIR -44 218 66 211 27 27 27 chr5 162137947 162137984 -40947548 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 673 319 85 20 chr5 162138277 162138525 -40947007 + L2 LINE L2 3004 3267 -5 1123 247 28 12 chr5 162140168 162140492 -40945040 - MLT1D LTR MaLR 0 505 177 1247 101 0 48 chr5 162140506 162140694 -40944838 - AluSg/x SINE Alu 0 310 132 2755 29 0 0 chr5 162140694 162141005 -40944527 - AluYb8 SINE Alu -7 311 1 435 183 128 106 chr5 162141009 162141189 -40944343 - MLT1D LTR MaLR -440 186 3 5881 144 8 5 chr5 162141208 162142821 -40942711 - L1PB1 LINE L1 -2 6149 4536 936 160 47 27 chr5 162142818 162143074 -40942458 + L1M4 LINE L1 4383 4643 -1503 * 224 182 338 26 chr5 162143441 162143518 -40942014 - MIR3 SINE MIR -25 183 83 309 284 123 39 chr5 162143554 162143758 -40941774 + MIR SINE MIR 21 241 -21 1612 92 0 0 chr5 162144445 162144652 -40940880 + AluSg/x SINE Alu 94 300 -12 303 85 0 0 chr5 162145319 162145366 -40940166 + (A)n Simple_repeat Simple_repeat 1 47 0 291 249 34 73 chr5 162146112 162146289 -40939243 + L1ME4a LINE L1 5718 5887 -234 2042 70 0 12 chr5 162146347 162146605 -40938927 + AluY SINE Alu 39 293 -18 25 0 0 0 chr5 162146715 162146740 -40938792 + AT_rich Low_complexity Low_complexity 1 25 0 749 128 101 0 chr5 162146748 162146896 -40938636 + L1MB3 LINE L1 6021 6183 0 624 91 0 0 chr5 162147587 162147675 -40937857 + (AATTG)n Simple_repeat Simple_repeat 2 89 0 290 283 53 48 chr5 162147943 162148130 -40937402 - L2 LINE L2 -273 2999 2812 360 289 90 71 chr5 162148214 162148525 -40937007 + L2 LINE L2 2587 2903 -411 185 318 16 0 chr5 162148538 162148601 -40936931 + L2 LINE L2 3243 3306 -7 208 355 168 9 chr5 162149439 162149546 -40935986 + L2 LINE L2 3149 3272 0 375 257 28 9 chr5 162149931 162150040 -40935492 + MIR SINE MIR 123 233 -29 188 261 0 0 chr5 162150577 162150623 -40934909 - MIR SINE MIR -84 124 79 954 300 149 31 chr5 162150769 162151519 -40934013 + L2 LINE L2 2441 3293 -20 1330 100 83 8 chr5 162152737 162152977 -40932555 + L1MA4 LINE L1 6038 6295 -5 250 354 31 56 chr5 162153651 162153812 -40931720 + MIR SINE MIR 35 191 -71 190 359 16 0 chr5 162154097 162154161 -40931371 + MIR3 SINE MIR 97 161 -47 239 333 0 13 chr5 162154165 162154243 -40931289 + MIR SINE MIR 34 110 -152 1570 251 20 24 chr5 162154251 162154744 -40930788 - L1ME1 LINE L1 -2 6164 5674 851 180 95 60 chr5 162154790 162154990 -40930542 - MER58A DNA MER1_type -17 207 1 1690 228 37 36 chr5 162154996 162155814 -40929718 - L1ME1 LINE L1 -521 5645 4819 1249 165 27 27 chr5 162155793 162156053 -40929479 + L1MD3 LINE L1 7735 7994 -1 * 429 209 48 9 chr5 162156049 162156154 -40929378 - L1ME1 LINE L1 -1287 4859 4751 * 406 244 69 92 chr5 162156202 162156333 -40929199 + L2 LINE L2 3141 3268 -4 297 292 14 0 chr5 162156845 162156917 -40928615 - L2 LINE L2 -32 3240 3168 216 0 0 0 chr5 162157054 162157078 -40928454 + (CCAA)n Simple_repeat Simple_repeat 2 25 0 246 200 73 0 chr5 162158667 162158722 -40926810 - L2 LINE L2 -5 3308 3250 2347 96 0 10 chr5 162159768 162160069 -40925463 - AluSg SINE Alu -12 298 1 205 260 0 40 chr5 162160103 162160153 -40925379 - L3 LINE CR1 -10 1567 1520 481 305 42 11 chr5 162161084 162161274 -40924258 + MIR SINE MIR 15 210 -52 660 295 33 14 chr5 162161906 162162116 -40923416 + MIR SINE MIR 49 262 0 338 250 82 28 chr5 162162644 162162827 -40922705 + MIR SINE MIR 11 252 -10 180 317 17 0 chr5 162163644 162163704 -40921828 - MIR3 SINE MIR -8 200 140 300 359 129 29 chr5 162164060 162164269 -40921263 + MER115 DNA AcHobo 207 436 -257 459 301 70 91 chr5 162164327 162164669 -40920863 + L2 LINE L2 2938 3272 0 667 316 49 12 chr5 162165310 162165557 -40919975 - MIR SINE MIR -4 258 3 651 271 100 70 chr5 162165756 162166225 -40919307 - MLT1H1 LTR MaLR -8 547 65 512 289 114 22 chr5 162166396 162166624 -40918908 - MIR SINE MIR -5 257 9 509 270 75 8 chr5 162167308 162167549 -40917983 + MIR SINE MIR 2 258 -4 186 311 68 72 chr5 162167650 162167885 -40917647 + MIR SINE MIR 29 262 0 193 250 0 0 chr5 162167896 162167940 -40917592 - L2 LINE L2 -15 3298 3255 2589 324 140 26 chr5 162169216 162171259 -40914273 + L2 LINE L2 985 3271 -1 252 350 17 8 chr5 162171462 162171582 -40913950 - MIR SINE MIR -6 256 136 244 213 96 0 chr5 162171715 162171809 -40913723 + Charlie7 DNA MER1_type 55 157 -2455 688 272 58 60 chr5 162171939 162172110 -40913422 + Charlie7 DNA MER1_type 373 543 -2069 1292 230 13 45 chr5 162172110 162172492 -40913040 + MLT1A2 LTR MaLR 1 370 -4 688 272 58 60 chr5 162172492 162172816 -40912716 + Charlie7 DNA MER1_type 543 867 -1745 952 263 79 61 chr5 162172820 162173084 -40912448 + MLT1J LTR MaLR 3 282 -229 1806 257 57 42 chr5 162173084 162173663 -40911869 - MLT1E LTR MaLR -2 591 4 952 263 79 61 chr5 162173663 162173889 -40911643 + MLT1J LTR MaLR 282 502 -9 2312 255 48 50 chr5 162173904 162174972 -40910560 + Charlie7 DNA MER1_type 872 1937 -675 1794 241 78 6 chr5 162174972 162175469 -40910063 - MLT1E LTR MaLR 0 593 61 1124 223 123 25 chr5 162175523 162175993 -40909539 + Charlie7 DNA MER1_type 1934 2449 -163 29 47 0 0 chr5 162176001 162176044 -40909488 + AT_rich Low_complexity Low_complexity 1 43 0 1134 148 90 28 chr5 162176156 162176446 -40909086 + MER33 DNA MER1_type 1 308 -16 42279 36 4 1 chr5 162177073 162183207 -40902325 + L1PA4 LINE L1 4 6152 -3 300 337 199 6 chr5 162183483 162183664 -40901868 - L3 LINE CR1 -183 1394 1179 1510 197 84 30 chr5 162183694 162184064 -40901468 - MLT1B LTR MaLR 0 390 1 215 227 106 0 chr5 162184106 162184172 -40901360 - MIR SINE MIR -88 120 48 604 170 9 0 chr5 162184481 162184587 -40900945 + MER45A DNA AcHobo 66 172 -6 2424 107 0 0 chr5 162184609 162184919 -40900613 + AluSx SINE Alu 1 310 -2 253 204 19 19 chr5 162184938 162184992 -40900540 + MIR SINE MIR 30 83 -125 425 259 117 74 chr5 162185145 162185512 -40900020 + MLT1K LTR MaLR 85 467 -121 330 206 0 44 chr5 162185615 162185683 -40899849 + L2 LINE L2 3190 3254 -18 205 343 93 36 chr5 162186263 162186403 -40899129 + L3 LINE CR1 1319 1466 -111 1660 172 159 8 chr5 162186543 162186915 -40898617 + MSTA LTR MaLR 1 428 0 242 292 31 0 chr5 162187039 162187104 -40898428 + L2 LINE L2 3247 3313 0 251 315 154 15 chr5 162187600 162187730 -40897802 - MIR3 SINE MIR -28 180 33 1107 279 127 19 chr5 162188313 162188846 -40896686 + L2 LINE L2 2725 3309 -4 2177 89 11 0 chr5 162188947 162189261 -40896271 + AluSp SINE Alu 3 319 0 228 158 123 0 chr5 162189473 162189530 -40896002 + MER117 DNA MER1_type 2 65 -132 228 308 100 25 chr5 162189823 162189943 -40895589 + MIR SINE MIR 63 191 -71 900 274 20 16 chr5 162191057 162191309 -40894223 - MIR SINE MIR -9 253 1 5354 88 1 42 chr5 162191716 162192535 -40892997 - L1PA8A LINE L1 0 6131 5346 1301 208 88 20 chr5 162192562 162192961 -40892571 + Charlie4a DNA MER1_type 41 466 -42 440 223 23 62 chr5 162192995 162193125 -40892407 - MIR SINE MIR -50 212 88 440 246 152 0 chr5 162193981 162194119 -40891413 + MIR SINE MIR 91 249 -13 375 298 92 30 chr5 162194138 162194269 -40891263 + MIR SINE MIR 3 141 -121 831 65 0 0 chr5 162194444 162194552 -40890980 - AluY SINE Alu -9 302 195 357 324 95 7 chr5 162195037 162195185 -40890347 - MIR SINE MIR -85 177 17 1038 217 29 0 chr5 162195467 162195674 -40889858 + MER45B DNA AcHobo 2 214 -826 240 175 0 0 chr5 162195668 162195708 -40889824 + MER45B DNA AcHobo 999 1038 -2 * 469 171 57 0 chr5 162195897 162195985 -40889547 + LTR54B LTR ERV1 10 102 -396 2285 183 77 77 chr5 162195985 162196702 -40888830 + LTR8A LTR ERV1 1 717 -10 1016 179 105 20 chr5 162196788 162197084 -40888448 + LTR54B LTR ERV1 176 496 -2 2039 139 26 67 chr5 162198098 162198553 -40886979 - MLT2D LTR ERVL 0 520 1 281 281 0 61 chr5 162198572 162198654 -40886878 - MER5B DNA MER1_type -55 123 47 417 260 20 20 chr5 162199063 162199209 -40886323 - MER103 DNA DNA -1 165 20 278 354 104 14 chr5 162199902 162200046 -40885486 - MER91A DNA MER1_type -34 162 6 258 299 76 110 chr5 162200395 162200686 -40884846 - L2 LINE L2 -45 3227 2947 624 307 191 41 chr5 162200760 162201926 -40883606 - L2 LINE L2 -609 2705 1365 258 32 0 0 chr5 162202958 162202989 -40882543 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4200 110 13 6 chr5 162203025 162203740 -40881792 + MER51C LTR ERV1 1 640 0 202 306 0 0 chr5 162203769 162203831 -40881701 + L2 LINE L2 1773 1834 -1480 23 33 0 0 chr5 162203870 162203900 -40881632 + AT_rich Low_complexity Low_complexity 1 30 0 362 323 78 28 chr5 162204029 162204246 -40881286 + L2 LINE L2 1916 2143 -1171 222 303 13 40 chr5 162204312 162204388 -40881144 - MIR3 SINE MIR -48 160 87 771 294 87 3 chr5 162205289 162205599 -40879933 + LTR16A LTR ERVL 114 449 -1 343 279 26 19 chr5 162205895 162206049 -40879483 + MER117 DNA MER1_type 1 155 -42 359 352 104 53 chr5 162206343 162206681 -40878851 + L2 LINE L2 2916 3270 -2 2420 77 3 0 chr5 162207340 162207637 -40877895 + AluSp SINE Alu 1 298 -15 456 263 263 0 chr5 162210089 162210249 -40875283 - MIR SINE MIR -49 213 12 755 276 31 5 chr5 162210300 162210496 -40875036 - MIR SINE MIR -55 207 7 246 282 94 34 chr5 162210587 162210704 -40874828 + MIR SINE MIR 139 262 0 793 196 87 6 chr5 162210716 162210889 -40874643 - MIR SINE MIR -14 248 62 927 278 17 0 chr5 162212996 162213226 -40872306 - MIR SINE MIR -14 248 15 532 327 35 5 chr5 162214170 162214369 -40871163 - MIR SINE MIR -46 216 12 235 259 136 12 chr5 162214549 162214630 -40870902 - MIR SINE MIR -122 140 50 454 287 40 7 chr5 162215530 162215680 -40869852 - MIR SINE MIR -27 235 81 389 319 0 9 chr5 162216008 162216124 -40869408 + L2 LINE L2 3199 3313 0 537 294 92 24 chr5 162218061 162218353 -40867179 + MER102b DNA MER1_type 1 312 -29 396 335 74 10 chr5 162218376 162218579 -40866953 + MIR SINE MIR 47 262 0 387 250 229 5 chr5 162218925 162219140 -40866392 + MIR SINE MIR 6 258 -4 21 0 0 0 chr5 162219372 162219393 -40866139 + AT_rich Low_complexity Low_complexity 1 21 0 568 171 0 0 chr5 162219707 162219795 -40865737 + Tigger4(Zombi) DNA MER2_type 1 88 -2643 * 5516 94 26 4 chr5 162219781 162220625 -40864907 + Tigger4(Zombi) DNA MER2_type 1869 2731 0 227 146 36 36 chr5 162220688 162220743 -40864789 - L2 LINE L2 -1 3312 3258 * 581 325 35 16 chr5 162220742 162220997 -40864535 - MIR SINE MIR -2 260 1 188 242 0 0 chr5 162221084 162221117 -40864415 + MIR SINE MIR 218 250 -12 22 0 0 0 chr5 162221141 162221163 -40864369 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 162221369 162221390 -40864142 + AT_rich Low_complexity Low_complexity 1 21 0 203 152 0 0 chr5 162222914 162222947 -40862585 + (ATG)n Simple_repeat Simple_repeat 3 35 0 305 203 101 0 chr5 162223128 162223207 -40862325 + LTR16A1 LTR ERVL 371 457 0 288 219 73 32 chr5 162223250 162223373 -40862159 + MIR SINE MIR 135 262 0 261 189 57 0 chr5 162223528 162223581 -40861951 - L2 LINE L2 -1 3312 3257 296 255 159 35 chr5 162223584 162223729 -40861803 + MIR SINE MIR 85 247 -15 320 0 25 0 chr5 162224442 162224482 -40861050 + (TG)n Simple_repeat Simple_repeat 1 41 0 1999 115 0 17 chr5 162225313 162225631 -40859901 + AluSg SINE Alu 1 313 0 326 356 145 40 chr5 162225783 162226237 -40859295 - L2 LINE L2 -223 3049 2544 220 223 128 53 chr5 162227713 162227807 -40857725 - L2 LINE L2 -8 3305 3205 203 297 87 99 chr5 162228121 162228444 -40857088 - L2 LINE L2 -44 3228 2910 330 225 100 25 chr5 162228561 162228681 -40856851 - L2 LINE L2 -549 2765 2637 332 364 110 9 chr5 162229600 162229828 -40855704 - MIR SINE MIR 0 262 12 503 296 41 17 chr5 162230405 162230577 -40854955 + MIR SINE MIR 20 195 -67 333 324 124 22 chr5 162230594 162230819 -40854713 - MIR SINE MIR -13 249 2 545 329 95 13 chr5 162230843 162231074 -40854458 - MIR SINE MIR -12 250 1 6133 87 19 58 chr5 162231293 162231972 -40853560 - L1PA13 LINE L1 -2 6161 5457 2132 68 7 24 chr5 162231972 162232268 -40853264 - AluY SINE Alu -20 291 1 6133 87 19 58 chr5 162232268 162233278 -40852254 - L1PA13 LINE L1 -706 5457 4516 583 320 11 23 chr5 162233748 162233923 -40851609 + MIR3 SINE MIR 9 181 -27 1840 113 90 34 chr5 162234062 162234417 -40851115 - THE1C LTR MaLR 0 375 1 1832 150 10 14 chr5 162235288 162235582 -40849950 - AluSg SINE Alu -17 293 1 348 111 0 0 chr5 162236258 162236312 -40849220 + (TG)n Simple_repeat Simple_repeat 2 55 0 262 311 27 0 chr5 162236857 162236931 -40848601 + L3 LINE CR1 1027 1102 -475 434 346 67 45 chr5 162237094 162237406 -40848126 + L3 LINE CR1 1229 1547 -30 1766 71 123 15 chr5 162237666 162237934 -40847598 + AluSc SINE Alu 1 297 -12 216 67 0 0 chr5 162238722 162238752 -40846780 + (CCA)n Simple_repeat Simple_repeat 2 31 0 439 246 17 34 chr5 162238831 162238949 -40846583 - MIR SINE MIR -132 130 15 1595 222 56 36 chr5 162239214 162239406 -40846126 + MER110A LTR ERV1 1 188 -294 1545 181 50 11 chr5 162239406 162239688 -40845844 + AluJo SINE Alu 1 293 -19 1595 222 56 36 chr5 162239688 162239977 -40845555 + MER110A LTR ERV1 188 476 -6 313 261 57 11 chr5 162240939 162241027 -40844505 + L2 LINE L2 3177 3268 -4 2300 93 0 16 chr5 162241292 162241605 -40843927 - AluSg SINE Alu 0 310 3 345 100 0 0 chr5 162241756 162241806 -40843726 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 262 279 169 15 chr5 162241879 162242080 -40843452 - L1MC4a LINE L1 -1899 5909 5678 308 324 21 21 chr5 162243335 162243480 -40842052 - L2 LINE L2 -601 2713 2569 181 333 11 43 chr5 162243942 162244035 -40841497 + L3 LINE CR1 1087 1176 -401 228 330 43 0 chr5 162244041 162244135 -40841397 - L2 LINE L2 -15 3257 3160 * 390 356 121 21 chr5 162244133 162244414 -40841118 + L3 LINE CR1 1173 1481 -96 323 273 167 15 chr5 162244405 162244537 -40840995 - MIR SINE MIR -52 210 59 * 1498 166 131 5 chr5 162244731 162245104 -40840428 + L1MD2 LINE L1 5927 6346 -13 630 331 59 18 chr5 162245754 162246092 -40839440 - MLT1K LTR MaLR -111 477 126 2025 198 9 72 chr5 162246303 162246860 -40838672 + L1M4 LINE L1 4644 5165 -981 33 0 0 0 chr5 162246865 162246898 -40838634 + AT_rich Low_complexity Low_complexity 1 33 0 2005 124 10 0 chr5 162247025 162247324 -40838208 - AluY SINE Alu -9 302 1 1191 218 55 26 chr5 162247414 162247795 -40837737 - LTR37A LTR ERV1 -17 409 18 246 283 72 76 chr5 162249309 162249546 -40835986 + L2 LINE L2 2307 2542 -772 1644 169 11 0 chr5 162249904 162250164 -40835368 + AluJo SINE Alu 21 283 -29 317 309 59 26 chr5 162250304 162250456 -40835076 + MER117 DNA MER1_type 5 161 -36 227 175 0 35 chr5 162250973 162251030 -40834502 + A-rich Low_complexity Low_complexity 4 58 0 385 304 136 11 chr5 162251243 162251434 -40834098 - MIR SINE MIR -1 261 47 2235 80 104 8 chr5 162252447 162252823 -40832709 - LTR7 LTR ERV1 -38 412 1 1604 99 11 18 chr5 162252823 162253096 -40832436 - HERVH LTR ERV1 0 7713 7443 988 113 6 0 chr5 162253094 162253254 -40832278 - HERVH LTR ERV1 -1953 5760 5600 * 2353 166 0 0 chr5 162253255 162253659 -40831873 - HERVH LTR ERV1 -2564 5149 4746 865 90 0 0 chr5 162253660 162253782 -40831750 + HERVH LTR ERV1 3414 3535 -4178 625 271 103 36 chr5 162253814 162254172 -40831360 - L1MC4a LINE L1 -1959 5849 5468 2368 80 0 0 chr5 162254505 162254794 -40830738 - AluSc SINE Alu -20 289 1 213 338 0 0 chr5 162255431 162255502 -40830030 - MIR3 SINE MIR -13 195 125 462 168 50 30 chr5 162255503 162255531 -40830001 + AluSg/x SINE Alu 181 207 -121 1745 149 0 0 chr5 162255531 162255779 -40829753 + AluSx SINE Alu 1 248 -64 462 168 50 30 chr5 162255779 162255896 -40829636 + AluSg/x SINE Alu 207 328 0 2201 95 3 3 chr5 162256551 162256856 -40828676 + AluSg SINE Alu 1 305 -5 860 208 0 6 chr5 162257714 162257873 -40827659 + MLT1A2 LTR MaLR 4 161 -213 1380 180 29 8 chr5 162257877 162258116 -40827416 + AluJo SINE Alu 1 244 -68 253 175 0 0 chr5 162258151 162258222 -40827310 + AluJo SINE Alu 244 314 0 1015 217 23 36 chr5 162258235 162258456 -40827076 + MLT1A2 LTR MaLR 157 374 0 14612 186 65 43 chr5 162258653 162260939 -40824593 + L1M1 LINE L1 14 2247 -5318 1887 183 0 0 chr5 162260939 162261239 -40824293 + AluSx SINE Alu 1 300 -12 14612 186 65 43 chr5 162261239 162262559 -40822973 + L1M1 LINE L1 2247 3753 -3812 2049 133 7 10 chr5 162262559 162262861 -40822671 + AluSx SINE Alu 11 311 -1 14612 186 65 43 chr5 162262861 162263805 -40821727 + L1M1 LINE L1 3753 4674 -2891 6156 109 39 39 chr5 162263800 162263911 -40821621 + L1MA2 LINE L1 5169 5278 -1026 * 585 0 0 0 chr5 162263911 162263976 -40821556 + (TA)n Simple_repeat Simple_repeat 1 65 0 6156 109 39 39 chr5 162263976 162264999 -40820533 + L1MA2 LINE L1 5278 6296 -8 22 0 0 0 chr5 162265192 162265214 -40820318 + AT_rich Low_complexity Low_complexity 1 22 0 520 304 65 5 chr5 162265646 162265863 -40819669 - LTR67 LTR ERVL 0 557 328 356 248 60 45 chr5 162265957 162266090 -40819442 - LTR67 LTR ERVL -419 138 4 289 305 76 45 chr5 162266096 162266319 -40819213 + L1ME LINE L1 5499 5728 -393 451 268 107 12 chr5 162266319 162266487 -40819045 - MIR SINE MIR -5 257 74 2041 101 67 45 chr5 162266772 162267128 -40818404 - THE1B LTR MaLR 0 364 1 278 243 153 72 chr5 162267785 162267896 -40817636 - MER5A DNA MER1_type -21 168 49 1946 212 33 44 chr5 162267955 162268437 -40817095 + MLT1D LTR MaLR 27 503 -2 3706 178 6 4 chr5 162268455 162269136 -40816396 - L1PA15 LINE L1 0 6816 6135 23 0 0 0 chr5 162269247 162269270 -40816262 + AT_rich Low_complexity Low_complexity 1 23 0 2060 98 0 10 chr5 162269270 162269565 -40815967 - L1PB1 LINE L1 -2 6149 5858 1670 39 0 0 chr5 162269565 162269770 -40815762 + L1PA4 LINE L1 5947 6152 -3 3991 164 6 4 chr5 162269780 162271721 -40813811 - L1PB1 LINE L1 -278 5873 3772 1262 115 0 0 chr5 162271722 162271914 -40813618 - L1PA15 LINE L1 -664 6152 5961 397 145 26 0 chr5 162271911 162271987 -40813545 + L1MA1 LINE L1 6017 6094 -208 * 15099 229 29 9 chr5 162271967 162276401 -40809131 - L1PA15 LINE L1 -823 5974 1444 400 287 0 57 chr5 162276389 162276511 -40809021 - L1PA15 LINE L1 -6665 122 8 * 1788 266 112 38 chr5 162276550 162277598 -40807934 + L2 LINE L2 2141 3300 -13 187 361 36 12 chr5 162279217 162279300 -40806232 - MIR3 SINE MIR -45 163 79 458 319 104 21 chr5 162279697 162279938 -40805594 - MIR SINE MIR 0 262 2 358 320 118 50 chr5 162280397 162280797 -40804735 - L2 LINE L2 0 3313 2887 213 359 0 34 chr5 162281157 162281274 -40804258 - MIR SINE MIR 0 262 150 286 170 160 47 chr5 162281659 162281765 -40803767 - MLT1K LTR MaLR -3 585 468 394 103 0 0 chr5 162281874 162281932 -40803600 - Alu SINE Alu 0 302 245 1513 65 5 20 chr5 162281936 162282136 -40803396 + AluY SINE Alu 97 293 -18 2136 131 7 0 chr5 162282141 162282439 -40803093 + AluSx SINE Alu 1 300 -12 431 254 25 17 chr5 162283256 162283374 -40802158 + MIR SINE MIR 75 193 -69 225 0 0 0 chr5 162283498 162283523 -40802009 + (CA)n Simple_repeat Simple_repeat 2 26 0 917 292 29 19 chr5 162283553 162283868 -40801664 - LTR33 LTR ERVL -6 515 198 1027 286 19 0 chr5 162283890 162284149 -40801383 - L2 LINE L2 -679 2635 2372 180 0 0 0 chr5 162284793 162284813 -40800719 + (GA)n Simple_repeat Simple_repeat 1 20 0 2450 268 31 70 chr5 162285045 162286065 -40799467 - L2 LINE L2 -254 3059 2084 1865 156 23 3 chr5 162286212 162286513 -40799019 - AluJo SINE Alu -5 307 1 2167 128 0 0 chr5 162286664 162286960 -40798572 + AluSg SINE Alu 5 300 -10 845 95 27 0 chr5 162286960 162287107 -40798425 + (TA)n Simple_repeat Simple_repeat 2 152 0 295 221 116 0 chr5 162287278 162287373 -40798159 - MIR SINE MIR -6 256 151 429 271 23 8 chr5 162287818 162287951 -40797581 - MIR SINE MIR -115 147 13 848 230 102 43 chr5 162290169 162290404 -40795128 + MLT1L LTR MaLR 1 249 -366 338 239 220 0 chr5 162290561 162290670 -40794862 + MLT1L LTR MaLR 475 607 -8 269 301 142 0 chr5 162291172 162291285 -40794247 + L2 LINE L2 3139 3267 -5 325 304 149 28 chr5 162291444 162291658 -40793874 - MIR SINE MIR -15 247 8 206 255 39 0 chr5 162294053 162294104 -40791428 + L2 LINE L2 2927 2979 -334 27 0 0 0 chr5 162294358 162294385 -40791147 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5 162294503 162294533 -40790999 + AT_rich Low_complexity Low_complexity 1 30 0 188 313 61 71 chr5 162294639 162294738 -40790794 + L2 LINE L2 3123 3220 -52 514 351 37 4 chr5 162296729 162296971 -40788561 - MIR SINE MIR -10 252 3 366 286 111 30 chr5 162297442 162297739 -40787793 - L1MC4a LINE L1 -1646 6162 5842 643 281 72 108 chr5 162298502 162298862 -40786670 - L2 LINE L2 0 3313 2967 1528 246 67 78 chr5 162299048 162299426 -40786106 - L2 LINE L2 -327 2986 2617 1454 204 108 28 chr5 162299426 162299852 -40785680 - MLT1C LTR MaLR -3 464 5 1528 246 67 78 chr5 162299852 162300182 -40785350 - L2 LINE L2 -696 2617 2285 204 125 0 0 chr5 162300261 162300293 -40785239 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 377 335 67 10 chr5 162300359 162300568 -40784964 - MIR SINE MIR -1 261 41 1132 98 0 22 chr5 162300737 162300921 -40784611 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 540 45 0 0 chr5 162300925 162300992 -40784540 + (TCCC)n Simple_repeat Simple_repeat 2 68 0 * 684 0 0 0 chr5 162300991 162301067 -40784465 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 2197 92 0 4 chr5 162301071 162301352 -40784180 - AluY SINE Alu -29 282 3 307 377 19 19 chr5 162301535 162301689 -40783843 + MIR3 SINE MIR 13 166 -42 772 260 54 50 chr5 162301693 162301951 -40783581 + MIR SINE MIR 2 260 -2 1678 162 101 3 chr5 162302643 162302889 -40782643 + MER46B DNA MER2_type 1 163 -2568 1017 7 44 0 chr5 162302889 162303024 -40782508 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 1678 162 101 3 chr5 162303024 162303105 -40782427 + MER46B DNA MER2_type 163 235 -1 772 248 138 0 chr5 162305205 162305423 -40780109 - MIR SINE MIR -3 259 12 226 182 36 0 chr5 162305684 162305739 -40779793 + L1MC4 LINE L1 6653 6709 -1333 368 212 5 11 chr5 162305739 162305819 -40779713 + (TA)n Simple_repeat Simple_repeat 1 134 0 * 478 264 87 57 chr5 162305804 162306069 -40779463 + L1ME4a LINE L1 5669 5941 -180 25 0 0 0 chr5 162306133 162306158 -40779374 + AT_rich Low_complexity Low_complexity 1 25 0 856 282 23 30 chr5 162306495 162306796 -40778736 + LTR67 LTR ERVL 5 303 -254 240 210 20 80 chr5 162306921 162307021 -40778511 + LTR67 LTR ERVL 464 557 0 238 295 39 0 chr5 162307293 162307371 -40778161 - MIR3 SINE MIR -1 207 127 297 0 0 0 chr5 162308308 162308341 -40777191 + (CA)n Simple_repeat Simple_repeat 1 33 0 1730 313 115 21 chr5 162308496 162309512 -40776020 + L2 LINE L2 503 1614 -1700 2004 145 0 3 chr5 162309573 162309876 -40775656 - AluJb SINE Alu -6 306 5 22 35 0 0 chr5 162310061 162310090 -40775442 + AT_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr5 162310118 162310153 -40775379 + AT_rich Low_complexity Low_complexity 1 35 0 5511 67 3 0 chr5 162310153 162310852 -40774680 - L1PA8 LINE L1 -6 6166 5466 1830 171 51 16 chr5 162311011 162311386 -40774146 - MLT1B LTR MaLR -2 388 1 1535 319 74 69 chr5 162311597 162313262 -40772270 + L2 LINE L2 1618 3301 -12 751 254 12 0 chr5 162313595 162313768 -40771764 - MER45A DNA AcHobo 0 178 4 279 136 0 0 chr5 162314688 162314747 -40770785 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 945 103 5 32 chr5 162314782 162314967 -40770565 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 630 212 11 29 chr5 162315745 162315934 -40769598 + MIR SINE MIR 2 230 -32 283 267 200 18 chr5 162316175 162316340 -40769192 - MIR SINE MIR -21 241 47 2181 130 0 3 chr5 162316695 162317003 -40768529 - AluSx SINE Alu -5 307 1 959 125 15 0 chr5 162317926 162318062 -40767470 - FRAM SINE Alu -19 157 20 2059 144 0 7 chr5 162318120 162318426 -40767106 + AluSx SINE Alu 9 312 0 393 262 12 0 chr5 162318812 162318896 -40766636 + MER81 DNA DNA 1 85 -29 603 287 111 57 chr5 162318909 162319243 -40766289 - MLT1K LTR MaLR -35 553 202 2186 87 6 51 chr5 162320132 162320443 -40765089 + AluY SINE Alu 1 297 -14 357 243 62 42 chr5 162320602 162320746 -40764786 - MIR SINE MIR -40 222 76 289 340 70 0 chr5 162320885 162320985 -40764547 - L2 LINE L2 -18 3254 3148 254 191 0 0 chr5 162321853 162321895 -40763637 + L2 LINE L2 3219 3260 -12 369 267 182 0 chr5 162321999 162322164 -40763368 - MIR3 SINE MIR -7 201 7 209 205 0 0 chr5 162322203 162322242 -40763290 + (CAT)n Simple_repeat Simple_repeat 2 40 0 626 285 100 25 chr5 162322252 162322452 -40763080 - MIR SINE MIR -14 248 34 472 258 70 38 chr5 162322487 162322673 -40762859 - MIR SINE MIR -64 198 7 2006 92 0 4 chr5 162322904 162323165 -40762367 - AluSc SINE Alu -15 294 35 224 210 0 65 chr5 162323866 162323928 -40761604 + L2 LINE L2 3215 3272 0 196 292 15 46 chr5 162324009 162324074 -40761458 - L2 LINE L2 -14 3299 3237 223 192 19 0 chr5 162324341 162324393 -40761139 + GA-rich Low_complexity Low_complexity 4 56 0 2115 129 35 14 chr5 162324470 162324818 -40760714 + THE1A LTR MaLR 1 355 0 425 295 194 0 chr5 162326235 162326410 -40759122 + MIR SINE MIR 37 232 -30 305 296 78 41 chr5 162326753 162326881 -40758651 - L1ME4a LINE L1 -1 6120 5998 7674 137 14 28 chr5 162326881 162327120 -40758412 - HSMAR2 DNA Mariner -1 1301 1060 2155 124 13 0 chr5 162327120 162327426 -40758106 - AluSx SINE Alu 0 312 3 7674 137 14 28 chr5 162327426 162328504 -40757028 - HSMAR2 DNA Mariner -242 1060 3 305 296 78 41 chr5 162328504 162328719 -40756813 - L1ME4a LINE L1 -123 5998 5764 398 273 35 70 chr5 162329927 162330099 -40755433 + MLT1H LTR MaLR 140 305 -244 342 267 75 55 chr5 162330251 162330379 -40755153 - L2 LINE L2 0 3313 3180 1379 194 61 50 chr5 162330379 162330739 -40754793 - MLT1A1 LTR MaLR 0 365 2 342 267 75 55 chr5 162330739 162330756 -40754776 - L2 LINE L2 -133 3180 3165 1784 211 48 3 chr5 162331092 162331471 -40754061 + MSTD LTR MaLR 1 396 0 375 343 7 15 chr5 162331474 162331611 -40753921 - MER5A DNA MER1_type -8 181 46 235 250 115 19 chr5 162332077 162332181 -40753351 - L2 LINE L2 0 3313 3200 385 299 149 0 chr5 162332239 162332373 -40753159 - MIR SINE MIR -21 241 88 1029 212 22 4 chr5 162332389 162332620 -40752912 - MER57A LTR ERV1 -161 242 8 469 187 0 0 chr5 162332622 162332713 -40752819 - MER57A-int LTR ERV1 0 7537 7447 560 145 40 72 chr5 162332760 162332825 -40752707 - LTR54B LTR ERV1 -351 147 81 2332 141 5 19 chr5 162332825 162333193 -40752339 + THE1B LTR MaLR 1 363 -1 560 145 40 72 chr5 162333193 162333279 -40752253 - LTR54B LTR ERV1 -417 81 1 5911 208 17 26 chr5 162333280 162334640 -40750892 - MER57A-int LTR ERV1 -395 7142 2600 5760 198 31 59 chr5 162334929 162336874 -40748658 - MER57-int LTR ERV1 -1716 5821 1925 295 247 34 34 chr5 162336941 162337105 -40748427 - MER57-int LTR ERV1 -3194 1929 1763 2103 107 0 28 chr5 162337105 162337394 -40748138 - AluSg SINE Alu -16 294 14 295 247 34 34 chr5 162337394 162337407 -40748125 - MER57-int LTR ERV1 -3359 1764 1752 1891 212 11 41 chr5 162337423 162337886 -40747646 - LTR2 LTR ERV1 0 449 1 313 242 121 58 chr5 162337978 162338168 -40747364 + LTR48B LTR ERV1 148 349 -295 738 263 94 16 chr5 162338240 162338495 -40747037 - MER57-int LTR ERV1 -2650 1541 1267 841 260 25 8 chr5 162338635 162338870 -40746662 - MER34C LTR ERV1 -190 395 157 364 167 10 39 chr5 162339092 162339194 -40746338 - MER57-int LTR ERV1 -6695 842 744 2316 108 0 16 chr5 162339209 162339524 -40746008 + AluSx SINE Alu 1 310 -2 1583 194 12 58 chr5 162339547 162339976 -40745556 - MER57-int LTR ERV1 -6800 737 329 1634 119 47 18 chr5 162339976 162340305 -40745227 - MER61C LTR ERV1 0 434 2 1204 260 25 4 chr5 162340373 162340654 -40744878 - MER57A-int LTR ERV1 -7250 287 1 1752 219 5 3 chr5 162341155 162341524 -40744008 - MER57A LTR ERV1 -33 370 1 579 118 0 11 chr5 162342031 162342124 -40743408 + AluSg/x SINE Alu 217 308 -2 212 177 38 25 chr5 162344085 162344164 -40741368 + GA-rich Low_complexity Low_complexity 4 83 0 619 244 60 21 chr5 162344280 162344470 -40741062 - MIR SINE MIR -25 237 40 398 199 118 37 chr5 162346315 162346476 -40739056 - MER104 DNA Tc2 0 180 7 2033 153 2 54 chr5 162347349 162347754 -40737778 - MER89 LTR ERV1 0 559 176 1909 85 0 0 chr5 162347781 162348017 -40737515 - AluSg SINE Alu -21 289 54 8666 45 9 10 chr5 162348018 162349088 -40736444 + MER11C LTR ERVK 1 1069 -2 327 143 0 0 chr5 162349092 162349148 -40736384 - AluSg SINE Alu -244 56 1 267 140 40 0 chr5 162349148 162349198 -40736334 - MER89 LTR ERV1 -507 52 1 2324 148 28 26 chr5 162349552 162349979 -40735553 + MSTA LTR MaLR 1 428 0 1201 148 60 145 chr5 162350061 162350460 -40735072 + MLT1A1 LTR MaLR 1 365 0 268 296 151 40 chr5 162350658 162350810 -40734722 - LTR67 LTR ERVL -321 236 68 23 0 0 0 chr5 162350829 162350852 -40734680 + AT_rich Low_complexity Low_complexity 1 23 0 590 347 25 0 chr5 162351544 162351740 -40733792 - MIR SINE MIR -1 261 61 198 0 0 0 chr5 162352128 162352150 -40733382 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 416 155 12 0 chr5 162352491 162352575 -40732957 - MER53 DNA DNA 0 189 105 229 313 45 5 chr5 162352577 162352775 -40732757 + L1ME LINE L1 796 1001 -5069 443 171 0 0 chr5 162352794 162352870 -40732662 + MLT1A1 LTR MaLR 290 365 0 553 302 104 61 chr5 162352870 162353784 -40731748 - L1MEd LINE L1 -5095 1024 72 252 0 0 0 chr5 162353805 162353833 -40731699 + (T)n Simple_repeat Simple_repeat 1 28 0 392 144 22 56 chr5 162353882 162353972 -40731560 - MER74A LTR ERVL 0 558 472 2196 204 22 32 chr5 162353972 162354477 -40731055 - MER74A LTR ERVL -58 500 1 2154 118 3 10 chr5 162354840 162355154 -40730378 + AluSq SINE Alu 1 312 -1 226 0 0 0 chr5 162356294 162356319 -40729213 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1901 164 0 7 chr5 162356319 162356617 -40728915 - AluJb SINE Alu -16 296 1 712 285 137 15 chr5 162358113 162358506 -40727026 - Charlie7 DNA MER1_type -2147 465 25 214 191 0 0 chr5 162359132 162359174 -40726358 + A-rich Low_complexity Low_complexity 1 42 0 453 302 127 28 chr5 162360767 162361058 -40724474 + MLT1K LTR MaLR 154 473 -115 292 325 38 25 chr5 162361257 162361426 -40724106 - MIR SINE MIR -16 192 20 225 188 0 42 chr5 162361799 162361847 -40723685 - L2 LINE L2 0 3313 3268 1099 213 128 0 chr5 162361917 162362152 -40723380 - AluJb SINE Alu -15 297 33 1672 173 87 54 chr5 162362280 162362726 -40722806 + MLT1C LTR MaLR 1 461 -6 460 298 110 9 chr5 162362719 162362947 -40722585 + Charlie8 DNA MER1_type 9 259 -2158 * 228 182 0 0 chr5 162363624 162363668 -40721864 - MIR SINE MIR -141 121 78 278 330 41 10 chr5 162364457 162364554 -40720978 - MIR SINE MIR -64 144 45 332 294 30 67 chr5 162365156 162365425 -40720107 + MER41E LTR ERV1 202 460 -52 573 269 99 25 chr5 162365447 162365648 -40719884 - MIR SINE MIR -13 249 34 1381 206 56 18 chr5 162365657 162365996 -40719536 - MLT1E2 LTR MaLR 0 626 275 2131 130 0 29 chr5 162366129 162366445 -40719087 + AluSx SINE Alu 1 307 -5 627 198 8 0 chr5 162366811 162366932 -40718600 - MLT1E2 LTR MaLR -430 194 73 375 230 87 24 chr5 162366819 162366945 -40718587 - MLT2C1 LTR ERVL -223 174 41 * 241 328 102 39 chr5 162367528 162367656 -40717876 + L2 LINE L2 3132 3267 -5 509 274 37 7 chr5 162368542 162368677 -40716855 + MIR3 SINE MIR 6 144 -64 468 240 8 8 chr5 162368755 162368876 -40716656 - LTR28 LTR ERV1 0 1020 900 1307 214 63 140 chr5 162368915 162369767 -40715765 - LTR1B LTR ERV1 -38 982 1 207 0 0 0 chr5 162369857 162369880 -40715652 + (TTG)n Simple_repeat Simple_repeat 2 24 0 408 249 40 60 chr5 162370525 162370726 -40714806 + Charlie7 DNA MER1_type 2 198 -2414 447 240 123 17 chr5 162370729 162370908 -40714624 + Charlie7 DNA MER1_type 313 510 -2102 * 836 228 42 131 chr5 162370892 162371730 -40713802 + Charlie7 DNA MER1_type 1696 2458 -154 2342 81 0 3 chr5 162371768 162372063 -40713469 - AluY SINE Alu -17 294 1 1462 175 3 61 chr5 162372072 162372344 -40713188 - AluJo SINE Alu -22 290 35 6101 67 5 20 chr5 162372344 162373136 -40712396 + LTR17 LTR ERV1 1 780 0 1462 175 3 61 chr5 162373136 162373160 -40712372 - AluJo SINE Alu -277 35 11 25 0 0 0 chr5 162373225 162373250 -40712282 + AT_rich Low_complexity Low_complexity 1 25 0 647 250 120 0 chr5 162374143 162374327 -40711205 - MIR SINE MIR -49 213 8 1454 139 49 11 chr5 162374547 162374813 -40710719 + L1MC1 LINE L1 5879 6154 -179 453 179 79 14 chr5 162374841 162374981 -40710551 + L1ME2 LINE L1 5167 5315 -831 9025 181 18 22 chr5 162374992 162377142 -40708390 + L1PA8 LINE L1 10 2155 -4306 39581 62 5 1 chr5 162377143 162383260 -40702272 - L1PA5 LINE L1 -7 6147 1 21601 116 10 13 chr5 162383258 162387200 -40698332 + L1PA8 LINE L1 2140 6084 -403 * 1889 113 72 0 chr5 162387200 162387508 -40698024 + AluSp SINE Alu 1 327 0 21601 116 10 13 chr5 162387508 162387910 -40697622 + L1PA8 LINE L1 6084 6485 -2 2920 234 40 5 chr5 162387906 162388715 -40696817 + L1ME2 LINE L1 5319 6155 -9 * 713 180 47 106 chr5 162388900 162389155 -40696377 - L1MA10 LINE L1 -34 6300 6061 2209 128 0 0 chr5 162389409 162389707 -40695825 + AluSg SINE Alu 3 300 -10 24 53 0 0 chr5 162390246 162390284 -40695248 + AT_rich Low_complexity Low_complexity 1 38 0 2595 135 21 14 chr5 162390506 162391107 -40694425 - MER4E LTR ERV1 0 766 1 387 288 116 7 chr5 162391118 162391264 -40694268 - MIR SINE MIR -77 185 24 2128 139 0 0 chr5 162391507 162391808 -40693724 - AluSx SINE Alu -11 301 1 305 298 100 25 chr5 162391983 162392122 -40693410 - MIR3 SINE MIR -36 172 42 700 247 11 93 chr5 162392141 162392414 -40693118 - MIR SINE MIR -1 261 15 299 65 22 0 chr5 162392676 162392722 -40692810 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 234 79 0 26 chr5 162393031 162393069 -40692463 - LTR24C LTR ERV1 0 635 599 390 95 0 0 chr5 162393083 162393146 -40692386 - LTR24C LTR ERV1 -570 65 3 2185 206 112 27 chr5 162393148 162393712 -40691820 + MER21B LTR ERV1 25 636 -227 2601 166 19 12 chr5 162393903 162394385 -40691147 - MER31A LTR ERV1 0 485 1 555 112 0 0 chr5 162396039 162396128 -40689404 + (TA)n Simple_repeat Simple_repeat 2 90 0 353 232 0 0 chr5 162396130 162396199 -40689333 + MER21B LTR ERV1 22 90 -773 338 240 13 0 chr5 162396218 162396293 -40689239 + MER21B LTR ERV1 19 94 -769 * 508 248 105 0 chr5 162396291 162396444 -40689088 + MER21B LTR ERV1 43 211 -652 800 189 7 7 chr5 162396450 162396603 -40688929 + MER21B LTR ERV1 577 729 -134 1528 146 45 0 chr5 162396605 162396670 -40688862 + AluSx SINE Alu 56 117 -195 315 0 0 0 chr5 162396670 162396705 -40688827 + (CA)n Simple_repeat Simple_repeat 2 36 0 1528 146 45 0 chr5 162396705 162396885 -40688647 + AluSx SINE Alu 117 312 0 13177 26 0 0 chr5 162396997 162398624 -40686908 - L1P LINE L1 -889 5257 3631 29 70 0 0 chr5 162398662 162398719 -40686813 + AT_rich Low_complexity Low_complexity 1 57 0 195 42 0 0 chr5 162398950 162398974 -40686558 + (TAA)n Simple_repeat Simple_repeat 2 25 0 370 175 97 61 chr5 162398976 162399090 -40686442 + MER21B LTR ERV1 735 852 -11 418 220 92 0 chr5 162399313 162399447 -40686085 + MER58B DNA MER1_type 169 322 -19 37 39 0 0 chr5 162400732 162400783 -40684749 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 162400821 162400844 -40684688 + AT_rich Low_complexity Low_complexity 1 23 0 574 290 174 30 chr5 162400868 162401402 -40684130 + MLT1L LTR MaLR 5 615 0 1800 142 60 38 chr5 162401779 162402146 -40683386 + THE1C LTR MaLR 1 375 0 361 252 22 7 chr5 162402610 162402745 -40682787 + L1ME LINE L1 5590 5726 -395 2182 300 22 38 chr5 162402758 162403544 -40681988 + L1PA15 LINE L1 1 773 -6014 11563 228 22 11 chr5 162403613 162408247 -40677285 + L1PA15 LINE L1 1324 5993 -804 3686 134 62 27 chr5 162408250 162409226 -40676306 + MER11A LTR ERVK 1 1266 0 5000 140 9 6 chr5 162409232 162410046 -40675486 + L1PA15 LINE L1 5997 6812 -4 321 289 45 19 chr5 162410046 162410202 -40675330 + L1ME4a LINE L1 3323 3482 -2664 254 309 40 63 chr5 162410315 162410567 -40674965 + L1P LINE L1 3589 3834 -2312 1764 307 135 48 chr5 162410839 162411606 -40673926 + L2 LINE L2 1425 2124 -1189 2057 143 0 0 chr5 162411606 162411907 -40673625 - AluSc SINE Alu -8 301 1 1764 307 135 48 chr5 162411907 162412880 -40672652 + L2 LINE L2 2124 3304 -9 413 306 80 107 chr5 162412901 162413037 -40672495 + L1ME4a LINE L1 4260 4398 -1748 2025 122 7 0 chr5 162413037 162413316 -40672216 + AluSg SINE Alu 14 294 -16 393 39 0 0 chr5 162413321 162413372 -40672160 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 413 306 80 107 chr5 162413372 162413591 -40671941 + L1ME4a LINE L1 4402 4625 -1521 795 134 8 45 chr5 162413591 162413725 -40671807 - FLAM_C SINE Alu 0 133 5 413 306 80 107 chr5 162413725 162414172 -40671360 + L1ME4a LINE L1 4625 5047 -1099 24 32 0 0 chr5 162414238 162414269 -40671263 + AT_rich Low_complexity Low_complexity 1 31 0 265 284 16 44 chr5 162414336 162414519 -40671013 + L1ME4a LINE L1 5258 5435 -686 489 270 90 47 chr5 162414539 162414935 -40670597 + L1ME4a LINE L1 5494 5918 -203 234 222 30 40 chr5 162415120 162415219 -40670313 + (TTAAA)n Simple_repeat Simple_repeat 4 101 0 423 329 22 44 chr5 162415340 162415565 -40669967 - MIR SINE MIR -36 226 7 243 313 10 0 chr5 162416230 162416329 -40669203 + CT-rich Low_complexity Low_complexity 1 100 0 447 35 0 0 chr5 162416338 162416395 -40669137 + (CA)n Simple_repeat Simple_repeat 2 58 0 3292 192 59 61 chr5 162417268 162418197 -40667335 + L1MB7 LINE L1 5258 6184 0 306 0 0 0 chr5 162418209 162418243 -40667289 + (TG)n Simple_repeat Simple_repeat 1 34 0 273 188 116 0 chr5 162418250 162418319 -40667213 - L1ME4a LINE L1 -98 6023 5947 403 266 12 0 chr5 162418398 162418571 -40666961 + (TA)n Simple_repeat Simple_repeat 2 176 0 642 224 88 0 chr5 162419153 162419323 -40666209 + MER53 DNA DNA 1 185 -4 353 346 90 48 chr5 162420601 162420913 -40664619 + L2 LINE L2 2947 3271 -1 590 251 95 33 chr5 162420994 162421237 -40664295 + MIR SINE MIR 5 262 0 204 313 0 16 chr5 162422584 162422648 -40662884 - MER5A DNA MER1_type -117 72 10 432 264 48 32 chr5 162423161 162423286 -40662246 + L2 LINE L2 3187 3313 0 2111 192 38 2 chr5 162424254 162424671 -40660861 + MSTB1 LTR MaLR 1 432 0 1369 260 94 61 chr5 162424968 162425703 -40659829 + MER20B DNA MER1_type 2 760 -23 333 145 65 0 chr5 162425768 162425830 -40659702 - L1ME3A LINE L1 -88 6082 6017 191 36 36 0 chr5 162425832 162425860 -40659672 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 330 222 25 0 chr5 162425930 162426011 -40659521 - L1M4 LINE L1 -1299 4847 4765 6132 82 20 12 chr5 162426111 162426201 -40659331 + L1PA13 LINE L1 5291 5379 -784 258 32 0 0 chr5 162426201 162426232 -40659300 + (TA)n Simple_repeat Simple_repeat 2 32 0 6132 82 20 12 chr5 162426232 162427006 -40658526 + L1PA13 LINE L1 5379 6162 -1 365 311 29 0 chr5 162427019 162427122 -40658410 - MER91B DNA MER1_type -51 139 34 211 146 24 0 chr5 162427303 162427344 -40658188 + L2 LINE L2 3272 3313 0 1271 183 44 0 chr5 162427375 162427626 -40657906 - L1PB4 LINE L1 -2 6154 5893 1912 137 0 14 chr5 162428561 162428853 -40656679 + AluJb SINE Alu 1 288 -24 325 239 54 84 chr5 162429269 162429436 -40656096 + MLT1J2 LTR MaLR 1 200 -303 292 316 132 7 chr5 162429493 162429629 -40655903 - MIR SINE MIR -103 159 7 23 0 0 0 chr5 162429909 162429932 -40655600 + AT_rich Low_complexity Low_complexity 1 23 0 1021 240 18 5 chr5 162430402 162430623 -40654909 - MER58A DNA MER1_type 0 224 1 423 301 67 67 chr5 162430675 162430944 -40654588 - L2 LINE L2 0 3313 3045 310 258 53 76 chr5 162431026 162431158 -40654374 - MIR SINE MIR -108 154 26 344 185 152 54 chr5 162431316 162431408 -40654124 - L2 LINE L2 -2 3270 3170 603 241 55 35 chr5 162431409 162431608 -40653924 + MER63A DNA MER1_type 7 209 -1 610 305 11 5 chr5 162433269 162433459 -40652073 - Charlie8 DNA MER1_type -2154 263 73 395 273 111 12 chr5 162433657 162433829 -40651703 - L1ME3A LINE L1 -9 6161 5973 321 250 0 40 chr5 162435202 162435302 -40650230 + L1ME4a LINE L1 5481 5576 -545 1658 257 91 23 chr5 162435358 162435875 -40649657 + MLT1E2 LTR MaLR 75 626 0 452 299 79 0 chr5 162435942 162436156 -40649376 + L1ME4a LINE L1 5676 5906 -215 242 273 15 30 chr5 162436567 162436633 -40648899 - L2 LINE L2 0 3272 3208 400 294 81 45 chr5 162436890 162437111 -40648421 + MLT1K LTR MaLR 129 357 -231 228 275 116 36 chr5 162437144 162437282 -40648250 + MLT1K LTR MaLR 423 571 -17 228 343 55 14 chr5 162438344 162438417 -40647115 - MER91A DNA MER1_type -8 188 113 924 320 114 9 chr5 162438500 162438940 -40646592 - MLT1L LTR MaLR -88 527 42 21 0 0 0 chr5 162439240 162439261 -40646271 + AT_rich Low_complexity Low_complexity 1 21 0 8748 156 22 12 chr5 162439343 162441953 -40643579 + L1MA5 LINE L1 3664 6297 -3 363 313 40 40 chr5 162442090 162442291 -40643241 - MLT1K LTR MaLR -212 376 176 52 99 0 0 chr5 162442466 162442637 -40642895 + AT_rich Low_complexity Low_complexity 1 171 0 5532 199 39 41 chr5 162442662 162444786 -40640746 + L1MB7 LINE L1 3959 6081 -103 246 32 0 0 chr5 162445051 162445082 -40640450 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 236 270 16 16 chr5 162445440 162445503 -40640029 - L2 LINE L2 0 3272 3210 358 379 14 7 chr5 162445726 162445871 -40639661 + MIR SINE MIR 21 166 -96 7300 159 14 6 chr5 162447748 162449065 -40636467 - L1P LINE L1 -1275 4871 3544 214 191 0 0 chr5 162449353 162449395 -40636137 + T-rich Low_complexity Low_complexity 1 42 0 774 287 137 18 chr5 162450021 162450415 -40635117 + Charlie7 DNA MER1_type 25 465 -2147 542 284 37 0 chr5 162451477 162451611 -40633921 - MER74A LTR ERVL -322 236 98 793 311 78 63 chr5 162451653 162452456 -40633076 + L1MEd LINE L1 210 1024 -5095 470 171 0 0 chr5 162452456 162452532 -40633000 - MLT1A1 LTR MaLR 0 365 290 267 313 45 5 chr5 162452551 162452749 -40632783 - L1ME LINE L1 -5069 1001 796 439 155 12 0 chr5 162452751 162452835 -40632697 + MER53 DNA DNA 105 189 0 198 0 0 0 chr5 162453176 162453198 -40632334 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 593 347 25 0 chr5 162453586 162453782 -40631750 + MIR SINE MIR 61 261 -1 23 0 0 0 chr5 162454474 162454497 -40631035 + AT_rich Low_complexity Low_complexity 1 23 0 351 298 81 115 chr5 162454516 162454866 -40630666 + LTR67 LTR ERVL 68 428 -129 1204 148 60 145 chr5 162454866 162455265 -40630267 - MLT1A1 LTR MaLR 0 365 1 351 298 81 115 chr5 162455265 162455347 -40630185 + LTR67 LTR ERVL 428 483 -74 2324 148 28 26 chr5 162455347 162455774 -40629758 - MSTA LTR MaLR 0 428 1 351 298 81 115 chr5 162455774 162455846 -40629686 + LTR67 LTR ERVL 483 556 -1 282 140 40 0 chr5 162456128 162456178 -40629354 + MER89 LTR ERV1 1 52 -507 347 143 0 0 chr5 162456178 162456234 -40629298 + AluSg SINE Alu 1 56 -252 8643 45 9 10 chr5 162456238 162457308 -40628224 - MER11C LTR ERVK -2 1069 1 1904 85 0 0 chr5 162457309 162457545 -40627987 + AluSg SINE Alu 54 289 -21 2163 159 2 53 chr5 162457563 162457977 -40627555 + MER89 LTR ERV1 167 559 0 445 203 117 37 chr5 162458848 162459011 -40626521 + MER104 DNA Tc2 5 180 0 616 244 60 21 chr5 162460856 162461046 -40624486 + MIR SINE MIR 40 237 -25 212 177 38 25 chr5 162461162 162461241 -40624291 + CT-rich Low_complexity Low_complexity 4 83 0 584 110 0 11 chr5 162463206 162463297 -40622235 - AluSg/x SINE Alu -4 306 217 1868 219 5 3 chr5 162463804 162464173 -40621359 + MER57A LTR ERV1 1 370 -33 1297 260 25 4 chr5 162464674 162464955 -40620577 + MER57A-int LTR ERV1 1 287 -7250 1729 142 59 13 chr5 162465023 162465352 -40620180 + MER61C LTR ERV1 1 434 0 1711 194 12 58 chr5 162465352 162465781 -40619751 + MER57A-int LTR ERV1 329 737 -6800 2250 114 0 16 chr5 162465800 162466115 -40619417 - AluSx SINE Alu -2 310 1 391 167 10 39 chr5 162466130 162466232 -40619300 + MER57A-int LTR ERV1 744 842 -6695 916 260 25 8 chr5 162466454 162466689 -40618843 + MER34C LTR ERV1 157 395 -190 250 114 0 23 chr5 162466704 162466748 -40618784 + MER57-int LTR ERV1 2757 2799 -3532 830 259 94 16 chr5 162466829 162467084 -40618448 + MER57-int LTR ERV1 1267 1541 -2650 381 244 114 83 chr5 162467107 162467361 -40618171 - LTR48B LTR ERV1 -254 390 129 1921 212 11 41 chr5 162467438 162467901 -40617631 + LTR2 LTR ERV1 1 449 0 356 242 34 34 chr5 162467917 162467930 -40617602 + MER57-int LTR ERV1 1752 1764 -3359 2086 107 0 28 chr5 162467930 162468219 -40617313 + AluSg SINE Alu 14 294 -16 356 242 34 34 chr5 162468219 162468383 -40617149 + MER57-int LTR ERV1 1763 1929 -3194 6234 195 29 55 chr5 162468450 162470397 -40615135 + MER57-int LTR ERV1 1552 5821 -1583 1667 249 18 24 chr5 162470544 162471041 -40614491 + MER57-int LTR ERV1 2450 6147 -1390 1105 176 44 15 chr5 162471043 162471248 -40614284 - L1P3 LINE L1 -5933 528 318 245 222 0 32 chr5 162521347 162521410 -40564122 + (CATA)n Simple_repeat Simple_repeat 2 62 0 252 167 0 0 chr5 162521817 162521865 -40563667 + CT-rich Low_complexity Low_complexity 1 48 0 301 276 20 61 chr5 162525323 162525421 -40560111 - L1MC4 LINE L1 -1335 6707 6614 233 150 0 50 chr5 162525425 162525485 -40560047 - LTR66 LTR ERVL -171 439 383 1599 179 77 3 chr5 162526907 162527243 -40558289 + MER46B DNA MER2_type 1 236 0 1014 183 50 109 chr5 162528312 162528772 -40556760 - L1MC5 LINE L1 -22 7939 7507 336 273 0 0 chr5 162528852 162528962 -40556570 + CT-rich Low_complexity Low_complexity 2 111 0 238 256 48 60 chr5 162528962 162529130 -40556402 - L1MC5 LINE L1 -465 7496 7331 442 342 97 39 chr5 162529586 162530491 -40555041 + L2 LINE L2 2353 3309 -4 1106 224 42 17 chr5 162531022 162531263 -40554269 + MIR SINE MIR 2 248 -14 2231 115 0 0 chr5 162532101 162532406 -40553126 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 162533100 162533121 -40552411 + AT_rich Low_complexity Low_complexity 1 21 0 198 374 33 22 chr5 162533630 162533812 -40551720 - L2 LINE L2 -9 3304 3121 285 250 0 0 chr5 162534319 162534383 -40551149 + L2 LINE L2 3209 3272 0 217 372 55 33 chr5 162534494 162534677 -40550855 + MIR SINE MIR 1 187 -75 2246 119 0 0 chr5 162534742 162535053 -40550479 - AluSq SINE Alu -2 311 1 2271 93 3 13 chr5 162535053 162535363 -40550169 - AluSx SINE Alu -5 307 1 626 318 38 83 chr5 162535567 162536011 -40549521 + L2 LINE L2 2830 3253 -19 189 0 0 0 chr5 162536102 162536123 -40549409 + (TG)n Simple_repeat Simple_repeat 2 22 0 245 95 24 0 chr5 162536199 162536241 -40549291 + Alu SINE Alu 1 43 -260 2727 148 65 10 chr5 162536342 162536864 -40548668 + L1MCa LINE L1 1729 2279 -4147 1220 109 0 0 chr5 162536864 162537038 -40548494 + AluYa8 SINE Alu 129 302 -8 7093 52 20 0 chr5 162537351 162538297 -40547235 - L1PA7 LINE L1 -8 6146 5196 585 255 46 95 chr5 162538373 162538564 -40546968 + L1MEc LINE L1 1820 1990 -4406 6750 37 0 1 chr5 162538564 162539373 -40546159 + L1PA5 LINE L1 5339 6146 -8 585 255 46 95 chr5 162539373 162539506 -40546026 + L1MEc LINE L1 1990 2128 -4268 189 0 0 0 chr5 162540459 162540480 -40545052 + (T)n Simple_repeat Simple_repeat 1 21 0 216 171 73 0 chr5 162540937 162540978 -40544554 - MIR SINE MIR -136 126 83 405 0 0 0 chr5 162541628 162541673 -40543859 + (TG)n Simple_repeat Simple_repeat 2 46 0 526 239 66 66 chr5 162542302 162542469 -40543063 - MIR SINE MIR -94 168 2 1990 147 7 0 chr5 162542656 162542948 -40542584 - AluSx SINE Alu -18 294 1 203 218 39 39 chr5 162542970 162543048 -40542484 - MIR SINE MIR -1 261 184 * 6608 265 60 42 chr5 162543034 162545626 -40539906 - L2 LINE L2 0 3313 673 318 287 84 0 chr5 162545647 162545790 -40539742 - MIR SINE MIR -106 156 2 181 143 29 0 chr5 162545887 162545922 -40539610 - L2 LINE L2 -2 3311 3276 1971 165 0 0 chr5 162545935 162546238 -40539294 + AluSx SINE Alu 1 303 -9 1609 247 40 26 chr5 162546303 162546797 -40538735 + Tigger8 DNA MER2_type 162 662 -4 277 423 22 6 chr5 162546837 162547019 -40538513 - L2 LINE L2 -225 3088 2904 402 319 66 12 chr5 162547362 162547528 -40538004 - L2 LINE L2 0 3313 3139 2481 93 39 8 chr5 162547633 162547997 -40537535 + THE1C LTR MaLR 1 375 0 495 268 16 8 chr5 162548483 162548610 -40536922 - MIR SINE MIR -131 131 4 600 200 93 12 chr5 162548747 162549017 -40536515 - Charlie5 DNA MER1_type -27 2585 18 331 347 35 30 chr5 162550605 162550804 -40534728 + MIR SINE MIR 15 214 -48 206 195 52 0 chr5 162550832 162550909 -40534623 + (TATG)n Simple_repeat Simple_repeat 2 82 0 924 261 21 17 chr5 162551491 162551732 -40533800 + MIR SINE MIR 21 262 0 557 289 73 94 chr5 162552130 162552472 -40533060 - L2 LINE L2 -6 3266 2932 278 228 76 0 chr5 162552865 162552957 -40532575 + MIR3 SINE MIR 67 165 -43 264 307 51 44 chr5 162553899 162554036 -40531496 - MIR3 SINE MIR -63 145 8 452 291 135 0 chr5 162554886 162555027 -40530505 - L2 LINE L2 0 3272 3113 426 241 134 28 chr5 162555131 162555284 -40530248 + MIR SINE MIR 58 216 -46 843 307 12 4 chr5 162556042 162556283 -40529249 - MIR SINE MIR -14 248 6 206 176 20 0 chr5 162556391 162556442 -40529090 + CT-rich Low_complexity Low_complexity 2 53 0 1772 246 12 18 chr5 162556473 162556965 -40528567 - L1MD3 LINE L1 -11 7984 7496 22 0 0 0 chr5 162558156 162558178 -40527354 + AT_rich Low_complexity Low_complexity 1 22 0 1215 150 281 81 chr5 162558595 162558623 -40526909 - L1MC3 LINE L1 -140 7645 7624 1936 174 82 10 chr5 162558623 162559026 -40526506 - MSTB1 LTR MaLR 0 432 1 1215 150 281 81 chr5 162559026 162559378 -40526154 - L1MC3 LINE L1 -161 7624 7189 342 227 45 11 chr5 162559378 162559466 -40526066 - MLT1F1 LTR MaLR -443 124 34 2239 94 0 19 chr5 162559811 162560118 -40525414 - AluSc SINE Alu -8 301 1 242 291 25 13 chr5 162560869 162560948 -40524584 + MIR SINE MIR 112 191 -71 679 366 32 18 chr5 162561170 162561632 -40523900 - L2 LINE L2 0 3313 2842 2501 128 47 2 chr5 162561632 162562038 -40523494 + MSTA LTR MaLR 1 424 -4 679 366 32 18 chr5 162562038 162562120 -40523412 - L2 LINE L2 -471 2842 2763 180 111 0 0 chr5 162562805 162562832 -40522700 + (TTCTCC)n Simple_repeat Simple_repeat 3 29 0 526 295 66 11 chr5 162562960 162563143 -40522389 + MIR SINE MIR 21 213 -49 1534 243 143 20 chr5 162563153 162563703 -40521829 + MLT1G LTR MaLR 1 590 0 1436 294 146 15 chr5 162564064 162564943 -40520589 - L2 LINE L2 -1 3312 2322 529 345 114 17 chr5 162565070 162565605 -40519927 + L2 LINE L2 2709 3312 -1 21 36 0 0 chr5 162565652 162565680 -40519852 + AT_rich Low_complexity Low_complexity 1 28 0 330 328 32 17 chr5 162565808 162565950 -40519582 - MIR SINE MIR -62 146 7 190 393 90 25 chr5 162566593 162566715 -40518817 - L2 LINE L2 -63 3209 3080 * 420 318 27 14 chr5 162566710 162566858 -40518674 + MIR SINE MIR 5 154 -108 597 226 161 18 chr5 162567335 162567552 -40517980 + MIR SINE MIR 15 262 0 1553 125 26 55 chr5 162568021 162568332 -40517200 - L1MA9 LINE L1 0 6312 6011 224 343 0 0 chr5 162568942 162569012 -40516520 + T-rich Low_complexity Low_complexity 1 70 0 1628 84 4 36 chr5 162570200 162570451 -40515081 - AluY SINE Alu -1 310 68 3950 178 32 29 chr5 162570594 162570842 -40514690 - L1MB1 LINE L1 -9 6159 5913 1632 188 30 17 chr5 162570842 162571140 -40514392 - AluJb SINE Alu -10 302 1 3950 178 32 29 chr5 162571140 162571729 -40513803 - L1MB1 LINE L1 -255 5913 5319 292 324 117 21 chr5 162571899 162572044 -40513488 - MIR3 SINE MIR -9 199 41 257 341 81 16 chr5 162573152 162573275 -40512257 + L2 LINE L2 3106 3236 -36 2498 51 3 0 chr5 162573567 162573862 -40511670 - AluY SINE Alu -15 296 1 248 319 128 28 chr5 162574854 162574995 -40510537 - MIR SINE MIR -87 175 21 2540 65 0 0 chr5 162575052 162575360 -40510172 + AluY SINE Alu 1 308 -3 249 33 0 0 chr5 162577243 162577273 -40508259 + (A)n Simple_repeat Simple_repeat 1 30 0 530 292 246 21 chr5 162578028 162578538 -40506994 - L2 LINE L2 0 3313 2698 220 317 73 0 chr5 162578942 162579024 -40506508 + L2 LINE L2 3158 3245 -27 558 194 22 45 chr5 162579068 162579202 -40506330 + MER94 DNA DNA 4 134 0 831 264 114 23 chr5 162579300 162579773 -40505759 - MER113 DNA MER1_type? 0 521 6 1506 208 37 40 chr5 162579797 162580172 -40505360 - MLT1A2 LTR MaLR 0 374 1 27 0 0 0 chr5 162580232 162580259 -40505273 + AT_rich Low_complexity Low_complexity 1 27 0 1604 168 3 35 chr5 162580578 162580864 -40504668 + AluJo SINE Alu 23 299 -13 302 284 101 0 chr5 162581640 162581749 -40503783 + L2 LINE L2 3193 3312 -1 229 302 95 9 chr5 162581826 162581942 -40503590 - MIR SINE MIR -56 206 81 204 158 0 0 chr5 162582246 162582284 -40503248 + (TATG)n Simple_repeat Simple_repeat 2 39 0 255 86 0 0 chr5 162583024 162583059 -40502473 + MADE1 DNA Mariner 1 35 -45 634 310 29 8 chr5 162583264 162583509 -40502023 + MIR SINE MIR 13 262 0 11566 171 70 11 chr5 162583983 162586300 -40499232 + L1MB2 LINE L1 6 2459 -3925 9555 208 50 26 chr5 162586289 162587836 -40497696 + L1MB2 LINE L1 2899 4406 -2001 * 261 0 0 0 chr5 162587836 162587865 -40497667 + (CA)n Simple_repeat Simple_repeat 2 30 0 9555 208 50 26 chr5 162587865 162588232 -40497300 + L1MB2 LINE L1 4406 4762 -1645 1987 140 0 20 chr5 162588232 162588532 -40497000 + AluSq SINE Alu 16 309 -4 9555 208 50 26 chr5 162588532 162590027 -40495505 + L1MB2 LINE L1 4762 6389 -18 234 216 21 31 chr5 162590029 162590126 -40495406 + (TATAA)n Simple_repeat Simple_repeat 4 99 0 429 328 0 0 chr5 162590194 162590325 -40495207 + CT-rich Low_complexity Low_complexity 4 134 0 416 272 194 5 chr5 162592339 162592556 -40492976 - L1MC4a LINE L1 -1926 6276 6019 2099 132 3 0 chr5 162592698 162592994 -40492538 + AluSx SINE Alu 2 298 -14 261 83 0 0 chr5 162593363 162593399 -40492133 + (ATG)n Simple_repeat Simple_repeat 3 38 0 328 341 59 0 chr5 162593528 162593663 -40491869 - MIR3 SINE MIR -9 199 57 7817 246 44 31 chr5 162593708 162594558 -40490974 - L1MC4a LINE L1 -743 5797 4960 2816 22 0 0 chr5 162594558 162594872 -40490660 - AluYb8 SINE Alu -4 314 1 7817 246 44 31 chr5 162594872 162595544 -40489988 - L1MC4a LINE L1 -1580 4960 4298 1806 203 67 11 chr5 162595544 162595919 -40489613 - MSTD LTR MaLR 0 396 1 7817 246 44 31 chr5 162595919 162596718 -40488814 - L1MC4a LINE L1 -2242 4298 3511 1859 57 0 13 chr5 162596718 162596948 -40488584 + AluY SINE Alu 1 227 -84 7817 246 44 31 chr5 162596948 162596983 -40488549 - L1MC4a LINE L1 -3029 3511 3478 1538 125 54 29 chr5 162596983 162597263 -40488269 + AluY SINE Alu 1 287 -24 7817 246 44 31 chr5 162597263 162598036 -40487496 - L1MC4a LINE L1 -3062 3478 2772 3343 207 49 17 chr5 162598036 162598673 -40486859 + MER21B LTR ERV1 1 657 -206 334 148 114 80 chr5 162598678 162598766 -40486766 + MER21B LTR ERV1 772 862 -1 310 369 118 26 chr5 162599073 162599123 -40486409 - L1MC4a LINE L1 -6211 329 285 1138 36 0 0 chr5 162599123 162599262 -40486270 - L1PA5 LINE L1 0 6154 6016 310 369 118 26 chr5 162599262 162599482 -40486050 - L1MC4a LINE L1 -6255 285 34 539 346 67 35 chr5 162599925 162600429 -40485103 - MLT1K LTR MaLR 0 588 2 332 264 0 23 chr5 162602960 162603047 -40482485 - MIR SINE MIR 0 262 178 1035 310 37 39 chr5 162603047 162603512 -40482020 - LTR16B LTR ERVL 0 464 1 358 282 46 53 chr5 162603523 162603654 -40481878 - MIR SINE MIR -117 145 16 25 0 0 50 chr5 162603698 162603720 -40481812 + AT_rich Low_complexity Low_complexity 1 22 -16 1909 126 11 3 chr5 162603720 162604006 -40481526 - AluSg SINE Alu -22 288 1 25 0 0 50 chr5 162604006 162604023 -40481509 + AT_rich Low_complexity Low_complexity 22 38 0 442 324 43 22 chr5 162604077 162604262 -40481270 - MER5A DNA MER1_type 0 189 1 258 285 70 102 chr5 162604268 162604516 -40481016 + MIR SINE MIR 19 257 -5 1668 103 6 139 chr5 162604762 162605093 -40480439 + AluSq SINE Alu 1 287 -26 237 108 0 0 chr5 162605096 162605133 -40480399 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 211 328 0 0 chr5 162605669 162605727 -40479805 + MIR SINE MIR 97 154 -108 24 67 0 0 chr5 162606008 162606053 -40479479 + AT_rich Low_complexity Low_complexity 1 45 0 1749 167 0 52 chr5 162606073 162606402 -40479130 + AluJb SINE Alu 1 312 0 1412 225 77 16 chr5 162607788 162608241 -40477291 + Charlie4a DNA MER1_type 27 507 -1 1997 122 0 4 chr5 162609952 162610230 -40475302 + AluSg SINE Alu 1 277 -33 185 0 40 0 chr5 162610230 162610255 -40475277 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 209 321 223 9 chr5 162611057 162611169 -40474363 - L2 LINE L2 -2 3311 3176 * 289 291 36 9 chr5 162611154 162611264 -40474268 + MIR SINE MIR 138 250 -12 201 222 0 63 chr5 162611320 162611383 -40474149 + L2 LINE L2 3187 3245 -27 661 301 64 11 chr5 162611383 162611665 -40473867 - LTR16A1 LTR ERVL 0 457 161 1858 216 82 15 chr5 162611667 162612140 -40473392 + MLT1D LTR MaLR 1 505 0 208 121 0 0 chr5 162612369 162612402 -40473130 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 379 248 41 8 chr5 162613355 162613476 -40472056 - MLT1L LTR MaLR -4 611 487 5683 64 58 0 chr5 162613658 162614394 -40471138 + LTR17 LTR ERV1 2 780 0 180 218 0 73 chr5 162614588 162614643 -40470889 + MIR SINE MIR 175 225 -37 739 38 0 19 chr5 162615119 162615224 -40470308 + (TA)n Simple_repeat Simple_repeat 2 104 0 239 324 73 15 chr5 162615662 162615798 -40469734 - MIR SINE MIR -44 218 75 234 81 0 0 chr5 162615973 162616010 -40469522 + (A)n Simple_repeat Simple_repeat 1 37 0 2255 105 0 3 chr5 162617040 162617336 -40468196 + AluSc SINE Alu 6 300 -9 191 35 0 35 chr5 162617953 162617982 -40467550 + (TTTTA)n Simple_repeat Simple_repeat 4 31 0 605 274 29 70 chr5 162617992 162618233 -40467299 - MIR SINE MIR -1 261 31 263 304 61 0 chr5 162619780 162619895 -40465637 + MIR3 SINE MIR 35 156 -52 320 328 76 50 chr5 162620265 162620582 -40464950 + L3 LINE CR1 901 1225 -352 216 0 0 0 chr5 162621052 162621076 -40464456 + (T)n Simple_repeat Simple_repeat 1 24 0 1868 159 7 83 chr5 162621362 162621608 -40463924 + MLT1B LTR MaLR 1 203 -187 2341 107 0 0 chr5 162621608 162621916 -40463616 + AluSc SINE Alu 1 308 -1 1868 159 7 83 chr5 162621916 162622091 -40463441 + MLT1B LTR MaLR 203 390 0 199 296 148 46 chr5 162623118 162623314 -40462218 + L2 LINE L2 2829 3044 -228 626 289 164 4 chr5 162623525 162623750 -40461782 - MIR SINE MIR 0 262 2 183 156 0 0 chr5 162623846 162623878 -40461654 + (CTG)n Simple_repeat Simple_repeat 2 33 0 204 40 0 0 chr5 162624829 162624854 -40460678 + (GGGTG)n Simple_repeat Simple_repeat 4 28 0 263 295 95 37 chr5 162624988 162625154 -40460378 - MIR SINE MIR -38 170 16 2797 121 5 5 chr5 162626156 162626604 -40458928 - L1MA4A LINE L1 -329 5974 5527 40 73 0 0 chr5 162626630 162626712 -40458820 + AT_rich Low_complexity Low_complexity 1 82 0 394 233 93 67 chr5 162627225 162627261 -40458271 + MIR SINE MIR 109 143 -119 708 104 0 0 chr5 162627261 162627367 -40458165 + L1PA5 LINE L1 6045 6150 -4 394 233 93 67 chr5 162627367 162627480 -40458052 + MIR SINE MIR 143 262 0 402 261 86 49 chr5 162627497 162627742 -40457790 + L1ME4a LINE L1 5615 5868 -253 250 268 0 0 chr5 162628116 162628172 -40457360 - L2 LINE L2 -5 3267 3212 269 291 117 39 chr5 162629916 162630122 -40455410 - MIR SINE MIR 0 262 41 24 0 0 0 chr5 162631482 162631506 -40454026 + AT_rich Low_complexity Low_complexity 1 24 0 578 302 79 5 chr5 162631627 162631816 -40453716 - MIR SINE MIR -6 256 54 2213 128 0 6 chr5 162632574 162632887 -40452645 - AluSq SINE Alu -2 311 1 2298 107 0 0 chr5 162632901 162633200 -40452332 - AluSc SINE Alu -10 299 1 287 271 12 24 chr5 162633427 162633512 -40452020 + MER5A DNA MER1_type 1 84 -105 210 284 15 30 chr5 162633573 162633640 -40451892 + L2 LINE L2 2755 2820 -494 313 328 57 8 chr5 162633945 162634067 -40451465 + L2 LINE L2 3144 3271 -1 27 0 0 0 chr5 162634929 162634956 -40450576 + AT_rich Low_complexity Low_complexity 1 27 0 250 207 0 17 chr5 162635133 162635191 -40450341 + L2 LINE L2 3257 3313 0 469 275 58 37 chr5 162635207 162635410 -40450122 - MIR SINE MIR 0 262 64 23 68 0 0 chr5 162635983 162636027 -40449505 + AT_rich Low_complexity Low_complexity 1 44 0 27 0 0 0 chr5 162636579 162636606 -40448926 + AT_rich Low_complexity Low_complexity 1 27 0 210 158 0 0 chr5 162636815 162636853 -40448679 + T-rich Low_complexity Low_complexity 2 39 0 2198 121 3 0 chr5 162636939 162637229 -40448303 - AluSq SINE Alu -22 291 1 358 351 76 12 chr5 162637338 162637509 -40448023 + MER5A DNA MER1_type 7 188 -1 206 308 56 47 chr5 162637509 162637592 -40447940 - MIR3 SINE MIR -58 150 67 21 0 0 0 chr5 162638014 162638035 -40447497 + AT_rich Low_complexity Low_complexity 1 21 0 566 324 70 49 chr5 162638363 162638789 -40446743 + MLT1K LTR MaLR 139 573 -15 241 257 171 7 chr5 162638999 162639139 -40446393 - L1MC5 LINE L1 -48 7913 7751 909 311 83 12 chr5 162639389 162639820 -40445712 - LTR16B LTR ERVL -2 462 1 283 396 28 0 chr5 162639854 162639960 -40445572 + MIR SINE MIR 3 111 -151 5241 87 14 1 chr5 162640446 162641168 -40444364 + L1PA10 LINE L1 5438 6168 0 504 307 91 83 chr5 162641300 162641988 -40443544 + L2 LINE L2 2553 3271 -1 246 174 0 0 chr5 162642766 162642812 -40442720 + A-rich Low_complexity Low_complexity 1 46 0 503 304 110 18 chr5 162643777 162644112 -40441420 - L1MC4a LINE L1 -1911 5897 5532 183 292 73 42 chr5 162644140 162644236 -40441296 + L2 LINE L2 3138 3236 -36 207 88 0 0 chr5 162644578 162644612 -40440920 + (T)n Simple_repeat Simple_repeat 1 34 0 2197 115 7 0 chr5 162646206 162646510 -40439022 + AluSq SINE Alu 1 306 -7 195 316 0 0 chr5 162646574 162646631 -40438901 - L2 LINE L2 0 3272 3216 361 291 20 33 chr5 162646687 162646838 -40438694 - MIR SINE MIR 0 262 114 539 290 106 73 chr5 162648111 162648835 -40436697 + HAL1 LINE L1 1 748 -1759 2383 101 58 3 chr5 162648846 162649191 -40436341 - THE1B LTR MaLR 0 364 1 421 256 92 105 chr5 162649499 162649936 -40435596 - MLT1H LTR MaLR -24 525 95 247 232 144 88 chr5 162650380 162650505 -40435027 + MIR SINE MIR 59 190 -72 452 338 67 4 chr5 162650613 162650838 -40434694 - MIR SINE MIR 0 262 24 1723 195 0 10 chr5 162650844 162651151 -40434381 - AluJo SINE Alu -4 308 5 218 293 93 0 chr5 162651311 162651386 -40434146 - L2 LINE L2 -17 3296 3215 301 292 219 31 chr5 162651511 162651936 -40433596 - L2 LINE L2 -5 3308 2804 31 26 0 0 chr5 162653051 162653089 -40432443 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 162653226 162653255 -40432277 + AT_rich Low_complexity Low_complexity 1 29 0 258 276 40 40 chr5 162653295 162653447 -40432085 - L1ME LINE L1 -458 5663 5512 237 357 62 9 chr5 162653757 162653869 -40431663 + L2 LINE L2 2949 3066 -247 568 260 216 0 chr5 162653883 162654064 -40431468 + MIR SINE MIR 8 227 -35 408 302 215 15 chr5 162654369 162654574 -40430958 + MIR SINE MIR 1 246 -16 646 291 99 5 chr5 162655194 162655407 -40430125 - MIR SINE MIR -13 249 17 184 255 39 20 chr5 162655571 162655622 -40429910 - MIR SINE MIR -9 253 202 200 94 0 31 chr5 162655780 162655812 -40429720 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 233 292 28 14 chr5 162655815 162655887 -40429645 - L2 LINE L2 -1 3271 3199 2317 75 41 0 chr5 162656208 162656500 -40429032 + AluY SINE Alu 1 304 -7 1445 171 70 65 chr5 162656618 162656845 -40428687 + MLT1A2 LTR MaLR 17 249 -125 2160 91 18 0 chr5 162656845 162657156 -40428376 + AluSq SINE Alu 3 318 0 1445 171 70 65 chr5 162657156 162657283 -40428249 + MLT1A2 LTR MaLR 249 374 0 14376 37 1 2 chr5 162658121 162659978 -40425554 - L1PA3 LINE L1 -1464 4682 2828 7630 25 1 0 chr5 162659979 162661438 -40424094 + L1PA3 LINE L1 4686 6150 -5 526 279 8 0 chr5 162661627 162661749 -40423783 - L2 LINE L2 0 3313 3191 7000 117 9 5 chr5 162661786 162663142 -40422390 - L1MA1 LINE L1 -1 6301 4943 544 216 129 0 chr5 162663207 162663346 -40422186 + MER3 DNA MER1_type 53 209 0 2095 97 0 0 chr5 162663388 162663657 -40421875 + AluSq SINE Alu 1 269 -44 275 231 26 0 chr5 162663707 162663785 -40421747 - L2 LINE L2 -312 3001 2922 321 279 112 68 chr5 162664397 162664558 -40420974 - MIR SINE MIR -91 171 4 341 277 54 18 chr5 162665311 162665423 -40420109 + MIR SINE MIR 9 124 -138 27 29 0 0 chr5 162666476 162666510 -40419022 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 162666785 162666815 -40418717 + AT_rich Low_complexity Low_complexity 1 30 0 4446 145 47 9 chr5 162667386 162668247 -40417285 + L1MA8 LINE L1 5398 6290 -1 434 316 64 21 chr5 162669449 162669683 -40415849 + MIR SINE MIR 8 251 -11 770 313 0 0 chr5 162671002 162671216 -40414316 - MIR SINE MIR 0 262 49 206 167 37 37 chr5 162671599 162671653 -40413879 + MIR SINE MIR 90 143 -65 224 212 15 0 chr5 162672881 162672947 -40412585 + CT-rich Low_complexity Low_complexity 4 70 0 255 319 31 81 chr5 162673257 162673417 -40412115 + MER91A DNA MER1_type 1 152 -44 234 327 53 35 chr5 162673578 162673691 -40411841 - L2 LINE L2 -11 3261 3147 293 338 0 0 chr5 162673730 162673807 -40411725 - L2 LINE L2 -229 3043 2967 1701 192 0 31 chr5 162673990 162674308 -40411224 - AluJo SINE Alu -4 308 1 271 345 0 0 chr5 162674309 162674393 -40411139 + MER5B DNA MER1_type 36 119 -59 1453 223 54 11 chr5 162674684 162675034 -40410498 - MLT1A1 LTR MaLR 0 365 1 1021 196 33 9 chr5 162675650 162675864 -40409668 + MER20 DNA MER1_type 1 219 0 3543 55 8 41 chr5 162676169 162676511 -40409021 - L1PA7 LINE L1 -1 6153 5830 2348 89 0 0 chr5 162676511 162676804 -40408728 - AluSg SINE Alu -17 293 1 3543 55 8 41 chr5 162676804 162676954 -40408578 - L1PA7 LINE L1 -324 5830 5677 2884 29 0 0 chr5 162676983 162677324 -40408208 - L1PA3 LINE L1 -5 6150 5810 577 94 0 10 chr5 162677324 162677409 -40408123 - L1PA7 LINE L1 -499 5673 5588 378 0 0 0 chr5 162677981 162678023 -40407509 + (TG)n Simple_repeat Simple_repeat 1 42 0 226 296 28 37 chr5 162678047 162678155 -40407377 + MIR3 SINE MIR 93 199 -9 192 125 0 0 chr5 162678156 162678188 -40407344 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 419 289 102 73 chr5 162678533 162678779 -40406753 + MIR SINE MIR 4 256 -6 482 330 16 38 chr5 162678787 162679008 -40406524 + MIR SINE MIR 2 218 -44 1945 124 37 0 chr5 162679145 162679418 -40406114 + AluSx SINE Alu 2 284 -28 28 0 0 0 chr5 162681419 162681447 -40404085 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr5 162681501 162681524 -40404008 + (GA)n Simple_repeat Simple_repeat 2 24 0 195 284 42 74 chr5 162682556 162682651 -40402881 + MIR SINE MIR 7 98 -164 801 148 4 0 chr5 162683769 162684005 -40401527 - L1PA16 LINE L1 0 6166 5881 231 226 0 48 chr5 162684040 162684102 -40401430 + MIR SINE MIR 130 188 -74 2155 229 40 31 chr5 162684268 162684839 -40400693 + MLT1E2 LTR MaLR 51 626 0 340 291 99 35 chr5 162684840 162685012 -40400520 - MIR SINE MIR -32 230 48 242 225 14 70 chr5 162685835 162685906 -40399626 - MER113 DNA MER1_type? 0 521 455 399 308 108 0 chr5 162686569 162686689 -40398843 - MIR3 SINE MIR -11 197 65 556 52 26 0 chr5 162686969 162687046 -40398486 - MADE1 DNA Mariner 0 80 2 216 296 42 0 chr5 162687500 162687571 -40397961 + MIR SINE MIR 72 145 -63 452 314 103 14 chr5 162688186 162688409 -40397123 + MIR SINE MIR 17 259 -3 239 258 76 0 chr5 162688423 162688489 -40397043 - L2 LINE L2 -1 3312 3242 249 329 195 49 chr5 162688627 162689289 -40396243 - L2 LINE L2 -177 3095 2334 286 275 58 22 chr5 162689497 162689635 -40395897 - L1ME4a LINE L1 -4 6117 5975 427 185 0 11 chr5 162689928 162690020 -40395512 - MLT1D LTR MaLR 0 505 415 831 222 54 25 chr5 162690035 162690274 -40395258 - MLT1D LTR MaLR -258 247 2 229 49 0 49 chr5 162691860 162691901 -40393631 + (TTCC)n Simple_repeat Simple_repeat 1 39 0 1689 106 30 53 chr5 162691901 162692166 -40393366 - AluSx SINE Alu -20 292 34 386 291 44 0 chr5 162693395 162693553 -40391979 - Charlie8 DNA MER1_type -2146 271 107 256 326 29 22 chr5 162695445 162695583 -40389949 + L3b LINE CR1 1327 1465 -118 549 233 7 7 chr5 162696143 162696293 -40389239 + L1PA16 LINE L1 4219 4368 -1778 3944 144 52 9 chr5 162696400 162697271 -40388261 + L1PA16 LINE L1 4663 5495 -671 2482 151 21 16 chr5 162697271 162697695 -40387837 - MSTB LTR MaLR 0 426 1 3944 144 52 9 chr5 162697695 162697904 -40387628 + L1PA16 LINE L1 5495 5694 -472 285 29 0 0 chr5 162697904 162697938 -40387594 + (CATA)n Simple_repeat Simple_repeat 3 36 0 3944 144 52 9 chr5 162697938 162698067 -40387465 + L1PA16 LINE L1 5694 5924 -242 351 349 32 0 chr5 162698376 162698502 -40387030 + L2 LINE L2 3182 3311 -2 28 19 0 56 chr5 162700591 162700645 -40384887 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr5 162701450 162701474 -40384058 + AT_rich Low_complexity Low_complexity 1 24 0 400 339 61 17 chr5 162703127 162703169 -40382363 - MIR SINE MIR -3 259 220 1542 171 20 40 chr5 162703169 162703468 -40382064 - AluJb SINE Alu -19 293 1 400 339 61 17 chr5 162703468 162703655 -40381877 - MIR SINE MIR -42 220 20 270 281 4 0 chr5 162704058 162704149 -40381383 - MIR SINE MIR -59 149 57 2600 38 0 13 chr5 162704257 162704572 -40380960 - AluY SINE Alu 0 311 1 321 263 161 82 chr5 162704959 162705214 -40380318 - L2 LINE L2 -4 3309 3035 3287 157 6 8 chr5 162705395 162705923 -40379609 + MER1A DNA MER1_type 1 527 0 2671 60 3 8 chr5 162706717 162707068 -40378464 - L1PA7 LINE L1 0 6154 5806 233 269 0 0 chr5 162707335 162707387 -40378145 + L2 LINE L2 3259 3310 -3 344 357 14 7 chr5 162707713 162707853 -40377679 + MIR3 SINE MIR 3 143 -65 494 263 90 104 chr5 162708406 162708782 -40376750 - L2 LINE L2 -355 2959 2589 303 282 20 40 chr5 162708782 162708931 -40376601 + MLT1I LTR MaLR 1 146 -263 370 236 76 28 chr5 162709122 162709266 -40376266 + MLT1I LTR MaLR 258 408 -1 209 292 15 0 chr5 162709812 162709877 -40375655 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 327 150 0 0 chr5 162710192 162710252 -40375280 + (T)n Simple_repeat Simple_repeat 1 60 0 2173 133 26 32 chr5 162710803 162711180 -40374352 + THE1C LTR MaLR 1 375 0 1089 154 11 11 chr5 162711251 162711439 -40374093 + MER5A DNA MER1_type 1 188 -1 916 228 94 0 chr5 162712142 162712344 -40373188 + MER58A DNA MER1_type 1 221 -3 189 0 0 0 chr5 162713191 162713212 -40372320 + (TA)n Simple_repeat Simple_repeat 1 21 0 6091 30 0 5 chr5 162713213 162713966 -40371566 - L1PA5 LINE L1 -11 6143 5395 884 45 0 0 chr5 162713966 162714078 -40371454 + L1P LINE L1 4641 4752 -1394 216 0 0 0 chr5 162714986 162715010 -40370522 + (TC)n Simple_repeat Simple_repeat 2 25 0 185 277 15 31 chr5 162716836 162716901 -40368631 - MIR3 SINE MIR -2 206 143 * 1204 303 74 38 chr5 162716889 162717441 -40368091 - L2 LINE L2 -24 3289 2712 24 53 0 0 chr5 162717497 162717535 -40367997 + AT_rich Low_complexity Low_complexity 1 38 0 293 293 65 24 chr5 162718105 162718228 -40367304 - MIR SINE MIR -115 147 20 * 314 257 105 0 chr5 162718226 162718331 -40367201 - L2 LINE L2 -5 3308 3193 438 291 126 30 chr5 162718756 162718955 -40366577 + MIR SINE MIR 3 220 -42 1683 218 90 34 chr5 162719101 162719496 -40366036 - MLT1D LTR MaLR 0 505 77 1609 171 60 97 chr5 162719496 162719981 -40365551 + MLT1C LTR MaLR 1 467 0 1683 218 90 34 chr5 162719981 162720063 -40365469 - MLT1D LTR MaLR -428 77 1 186 182 23 45 chr5 162720952 162720996 -40364536 + L3b LINE CR1 1296 1338 -245 332 256 167 8 chr5 162721310 162721491 -40364041 - MIR SINE MIR -5 257 5 393 275 34 39 chr5 162721693 162721871 -40363661 - L3b LINE CR1 -192 1391 1215 27 0 0 0 chr5 162722717 162722744 -40362788 + AT_rich Low_complexity Low_complexity 1 27 0 641 152 14 41 chr5 162723667 162723812 -40361720 - L1PA15 LINE L1 -2 6163 6023 4627 62 7 5 chr5 162723834 162724443 -40361089 - L1PA8 LINE L1 -9 6163 5554 411 336 225 5 chr5 162724940 162725385 -40360147 + L2 LINE L2 2716 3263 -50 239 359 102 8 chr5 162725419 162725547 -40359985 + MIR3 SINE MIR 28 167 -41 644 311 66 73 chr5 162725738 162725875 -40359657 - L2 LINE L2 -2 3270 3134 1477 113 164 16 chr5 162725875 162726156 -40359376 + AluSg1 SINE Alu 1 309 0 644 311 66 73 chr5 162726156 162726456 -40359076 - L2 LINE L2 -138 3134 2836 478 176 0 0 chr5 162727207 162727292 -40358240 + MLT1B LTR MaLR 21 105 -285 4800 179 22 16 chr5 162727292 162728902 -40356630 + L1MA4 LINE L1 4444 6061 -239 2177 111 0 14 chr5 162728902 162729199 -40356333 + AluSx SINE Alu 1 293 -19 4800 179 22 16 chr5 162729199 162729437 -40356095 + L1MA4 LINE L1 6061 6296 -4 1331 148 140 4 chr5 162729452 162729716 -40355816 + MLT1B LTR MaLR 91 390 0 1787 216 31 5 chr5 162730368 162730753 -40354779 - MSTD LTR MaLR -1 395 1 306 335 102 11 chr5 162730777 162730953 -40354579 + MLT1K LTR MaLR 375 566 -22 429 342 148 5 chr5 162731433 162731629 -40353903 - MIR SINE MIR -9 253 30 3149 213 44 36 chr5 162732008 162733265 -40352267 - L1MB5 LINE L1 -6 6168 4896 4838 92 4 47 chr5 162733265 162733984 -40351548 - LTR12 LTR ERV1 0 688 1 3149 213 44 36 chr5 162733984 162734050 -40351482 - L1MB5 LINE L1 -1278 4896 4832 231 333 13 0 chr5 162734450 162734525 -40351007 + L2 LINE L2 2668 2743 -571 591 216 77 26 chr5 162735071 162735265 -40350267 + MER3 DNA MER1_type 1 204 -5 427 274 68 0 chr5 162735436 162735553 -40349979 - L2 LINE L2 0 3313 3189 419 238 59 0 chr5 162735555 162735656 -40349876 - MER20 DNA MER1_type -2 217 111 606 40 0 0 chr5 162735752 162735826 -40349706 + L1PA5 LINE L1 6073 6146 -8 198 0 0 0 chr5 162735928 162735950 -40349582 + (TG)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 162736665 162736686 -40348846 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 314 282 40 29 chr5 162738118 162738292 -40347240 + L1ME4a LINE L1 5733 5908 -213 946 329 63 5 chr5 162738446 162738883 -40346649 - L2 LINE L2 -270 3043 2579 760 246 11 6 chr5 162738935 162739114 -40346418 + MER20 DNA MER1_type 40 219 0 330 328 17 0 chr5 162739143 162739259 -40346273 - L2 LINE L2 -743 2571 2454 1192 87 6 22 chr5 162739284 162739467 -40346065 + MER30B DNA MER1_type 7 186 -4 266 248 43 57 chr5 162739477 162739595 -40345937 - MIR SINE MIR -135 73 1 344 364 106 14 chr5 162739874 162739986 -40345546 + L2 LINE L2 2735 2835 -479 1128 220 110 48 chr5 162739986 162740359 -40345173 - MSTD LTR MaLR 0 396 1 5914 237 77 28 chr5 162740359 162742012 -40343520 - MSTD-int LTR MaLR 0 1735 2 1511 219 55 31 chr5 162742014 162742398 -40343134 - MSTD LTR MaLR 0 396 4 344 364 106 14 chr5 162742398 162742498 -40343034 + L2 LINE L2 2835 2971 -343 524 266 108 0 chr5 162743031 162743189 -40342343 - MER5B DNA MER1_type -3 175 1 339 245 170 38 chr5 162743301 162743460 -40342072 + MIR SINE MIR 70 249 -13 267 208 14 28 chr5 162744659 162744731 -40340801 - MLT1K LTR MaLR 0 588 518 371 275 37 9 chr5 162744958 162745067 -40340465 - MLT1K LTR MaLR -348 240 129 220 289 11 56 chr5 162745221 162745311 -40340221 - L2 LINE L2 -64 3208 3123 204 309 0 0 chr5 162745341 162745396 -40340136 + A-rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr5 162745696 162745721 -40339811 + AT_rich Low_complexity Low_complexity 1 25 0 614 250 0 8 chr5 162745873 162746001 -40339531 + MIR3 SINE MIR 34 160 -48 276 155 357 0 chr5 162746002 162746086 -40339446 + MER117 DNA MER1_type 2 115 -82 358 317 32 27 chr5 162746962 162747148 -40338384 - MER5A DNA MER1_type -1 188 2 473 282 81 0 chr5 162747710 162747884 -40337648 - MIR SINE MIR -16 246 59 28 48 0 0 chr5 162748309 162748351 -40337181 + AT_rich Low_complexity Low_complexity 1 42 0 301 357 23 8 chr5 162748476 162748605 -40336927 - MIR SINE MIR -112 150 20 345 288 119 50 chr5 162748701 162749079 -40336453 - Charlie8 DNA MER1_type -1995 422 19 328 287 37 52 chr5 162750703 162750839 -40334693 + MIR SINE MIR 61 194 -68 469 305 133 13 chr5 162750890 162751205 -40334327 - L1MC4a LINE L1 -1899 5909 5557 330 123 0 0 chr5 162751317 162751374 -40334158 + (TG)n Simple_repeat Simple_repeat 2 58 0 219 211 18 35 chr5 162751952 162752009 -40333523 + MIR3 SINE MIR 7 62 -146 185 286 0 150 chr5 162752041 162752104 -40333428 + MIR SINE MIR 46 80 -182 2245 101 0 3 chr5 162752104 162752402 -40333130 - AluSg SINE Alu -13 297 1 185 286 0 150 chr5 162752402 162752471 -40333061 + MIR SINE MIR 80 158 -104 438 269 54 8 chr5 162752952 162753082 -40332450 + MIR SINE MIR 125 260 -2 279 311 160 8 chr5 162753223 162753342 -40332190 + MIR3 SINE MIR 58 194 -14 1050 172 74 46 chr5 162753385 162753710 -40331822 + MER33 DNA MER1_type 1 323 -1 547 269 134 70 chr5 162753759 162754273 -40331259 - MLT1K LTR MaLR 0 588 42 1380 194 8 0 chr5 162804327 162804590 -40280942 - MER82 DNA MER2_type -387 266 2 554 264 130 5 chr5 162804592 162804800 -40280732 + MIR SINE MIR 4 237 -25 208 214 0 24 chr5 162804984 162805026 -40280506 - L2 LINE L2 -16 3297 3257 823 171 14 0 chr5 162805067 162805207 -40280325 + FLAM_C SINE Alu 1 142 -1 217 296 74 25 chr5 162805482 162805563 -40279969 - MER5B DNA MER1_type -29 149 65 282 181 12 24 chr5 162807099 162807182 -40278350 + (TA)n Simple_repeat Simple_repeat 1 82 0 3516 128 15 10 chr5 162807630 162808153 -40277379 + MER1A DNA MER1_type 1 526 -1 261 284 90 125 chr5 162808204 162808525 -40277007 - L2 LINE L2 0 3272 2963 646 308 40 24 chr5 162808667 162808920 -40276612 - MIR SINE MIR -2 260 4 578 278 30 18 chr5 162809281 162809450 -40276082 - MIR3 SINE MIR -2 206 36 873 130 118 0 chr5 162811322 162811491 -40274041 - MER53 DNA DNA 0 189 1 189 0 0 0 chr5 162811756 162811777 -40273755 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 7520 37 0 0 chr5 162811777 162812925 -40272607 - L1PA5 LINE L1 0 6154 5007 1597 107 0 5 chr5 162813031 162813246 -40272286 + AluSg/x SINE Alu 87 300 -10 2270 122 3 0 chr5 162813935 162814246 -40271286 + AluSx SINE Alu 1 312 0 433 222 0 0 chr5 162815038 162815119 -40270413 - L2 LINE L2 0 3313 3233 686 266 54 46 chr5 162815158 162815350 -40270182 - L2 LINE L2 -262 3051 2840 1706 121 42 106 chr5 162815350 162815680 -40269852 + AluJb SINE Alu 2 310 -2 686 266 54 46 chr5 162815680 162815824 -40269708 - L2 LINE L2 -473 2840 2699 274 182 13 39 chr5 162815899 162815976 -40269556 - L1MC5 LINE L1 -215 7746 7672 260 224 119 0 chr5 162816031 162816098 -40269434 - L2 LINE L2 -780 2534 2460 208 174 14 116 chr5 162816266 162816335 -40269197 - MIR SINE MIR -111 151 90 236 264 0 0 chr5 162817643 162817696 -40267836 + CT-rich Low_complexity Low_complexity 2 54 0 380 308 44 7 chr5 162818002 162818198 -40267334 - MIR SINE MIR -1 207 3 1901 173 10 0 chr5 162819440 162819747 -40265785 - AluJo SINE Alu -2 310 1 635 262 62 57 chr5 162819891 162820101 -40265431 + MIR SINE MIR 20 230 -32 21 0 0 0 chr5 162820379 162820400 -40265132 + AT_rich Low_complexity Low_complexity 1 21 0 209 349 92 9 chr5 162821151 162821260 -40264272 - L2 LINE L2 -1 3271 3154 236 378 34 17 chr5 162821896 162822015 -40263517 - L2 LINE L2 -14 3258 3138 6442 50 2 1 chr5 162822215 162823017 -40262515 + L1PA7 LINE L1 5352 6154 0 329 257 140 14 chr5 162823083 162823305 -40262227 - L2 LINE L2 -351 2963 2714 378 311 66 0 chr5 162823334 162823456 -40262076 - L2 LINE L2 -202 3070 2941 245 339 160 29 chr5 162823490 162823803 -40261729 - L2 LINE L2 -913 2401 2048 2301 121 28 6 chr5 162824527 162824883 -40260649 - THE1B LTR MaLR 0 364 1 259 269 59 50 chr5 162824911 162825030 -40260502 - L2 LINE L2 -77 3236 3117 1941 115 0 0 chr5 162825443 162825703 -40259829 - AluSg1 SINE Alu -49 260 1 33 0 0 0 chr5 162826283 162826316 -40259216 + AT_rich Low_complexity Low_complexity 1 33 0 986 163 0 0 chr5 162826316 162826469 -40259063 - FRAM SINE Alu -23 153 1 192 341 0 44 chr5 162827324 162827415 -40258117 - L2 LINE L2 0 3272 3186 3208 176 67 12 chr5 162827600 162828289 -40257243 + L1MB2 LINE L1 5445 6171 0 388 140 0 0 chr5 162828378 162828435 -40257097 - L2 LINE L2 -1 3271 3215 288 183 50 17 chr5 162829169 162829229 -40256303 - L2 LINE L2 -1 3312 3251 256 343 115 21 chr5 162829377 162829899 -40255633 + L2 LINE L2 1535 2105 -1209 1340 213 30 37 chr5 162830028 162830324 -40255208 - AluJo SINE Alu -18 294 1 215 253 24 0 chr5 162832400 162832483 -40253049 + (TA)n Simple_repeat Simple_repeat 2 86 0 745 228 124 15 chr5 162832776 162832978 -40252554 - MER58A DNA MER1_type 0 224 1 2197 111 0 0 chr5 162833599 162833888 -40251644 + AluSc SINE Alu 6 294 -15 372 359 74 43 chr5 162834150 162834501 -40251031 - L2 LINE L2 -1 3271 2910 2952 16 0 0 chr5 162835668 162836179 -40249353 - L1PA2 LINE L1 -624 5531 5021 5468 13 0 0 chr5 162836179 162836796 -40248736 + L1PA2 LINE L1 5537 6154 -1 480 279 131 89 chr5 162837014 162837603 -40247929 + L2 LINE L2 2626 3257 -56 2334 106 0 0 chr5 162837669 162837962 -40247570 + AluSg SINE Alu 1 293 -17 263 68 68 0 chr5 162838284 162838343 -40247189 + (TA)n Simple_repeat Simple_repeat 2 64 0 716 159 16 0 chr5 162838346 162838472 -40247060 + MLT1C LTR MaLR 1 128 -339 346 255 31 10 chr5 162838514 162838612 -40246920 + MLT1C LTR MaLR 137 236 -231 408 87 65 0 chr5 162838612 162838704 -40246828 + GA-rich Low_complexity Low_complexity 1 98 0 222 360 84 44 chr5 162839207 162839410 -40246122 + L2 LINE L2 2701 2911 -403 2301 104 0 0 chr5 162839748 162840046 -40245486 - AluSx SINE Alu -14 298 1 268 365 103 26 chr5 162840067 162840494 -40245038 - L2 LINE L2 -618 2696 2237 2436 88 7 0 chr5 162841113 162841463 -40244069 + AluSc SINE Alu 1 352 0 2069 134 0 0 chr5 162843137 162843435 -40242097 - AluSx SINE Alu -14 298 1 263 50 25 0 chr5 162844175 162844215 -40241317 + MADE1 DNA Mariner 40 80 0 1895 167 27 0 chr5 162845329 162845664 -40239868 - MER2 DNA MER2_type 0 344 1 318 80 0 0 chr5 162845683 162845733 -40239799 + (CA)n Simple_repeat Simple_repeat 2 51 0 2226 113 0 7 chr5 162845747 162846049 -40239483 - AluSx SINE Alu -10 302 3 386 207 86 0 chr5 162846083 162846199 -40239333 + L1ME4a LINE L1 5990 6115 -6 1502 138 35 11 chr5 162848367 162848650 -40236882 - L1MA9 LINE L1 -30 6282 5993 188 265 0 12 chr5 162848713 162848796 -40236736 + (TA)n Simple_repeat Simple_repeat 2 83 0 713 128 26 0 chr5 162848796 162848913 -40236619 + L1MA8 LINE L1 5781 5900 -391 423 360 180 5 chr5 162850281 162850503 -40235029 - MIR SINE MIR 0 262 2 416 283 22 7 chr5 162850539 162850677 -40234855 + ERVL LTR ERVL 4954 5093 -671 4850 30 22 2 chr5 162851283 162851907 -40233625 - L1PA5 LINE L1 -1397 4749 4113 7480 36 5 0 chr5 162851907 162853317 -40232215 + L1PA5 LINE L1 4764 6147 -7 444 258 0 8 chr5 162853440 162853568 -40231964 - L1MC4a LINE L1 -1898 5910 5784 240 352 16 24 chr5 162853881 162854006 -40231526 - MIR3 SINE MIR -7 201 78 4173 57 17 0 chr5 162854560 162855090 -40230442 - L1PA7 LINE L1 0 6154 5616 4023 74 39 41 chr5 162855090 162855637 -40229895 + L1P3 LINE L1 4742 5291 -863 282 29 0 0 chr5 162855637 162855672 -40229860 + (CA)n Simple_repeat Simple_repeat 2 36 0 4023 74 39 41 chr5 162855672 162855990 -40229542 + L1P3 LINE L1 5291 5608 -546 2740 148 15 45 chr5 162856176 162856322 -40229210 - L1PA16 LINE L1 -3 6163 6014 2341 110 0 0 chr5 162856322 162856632 -40228900 - AluSx SINE Alu -2 310 1 2740 148 15 45 chr5 162856632 162857012 -40228520 - L1PA16 LINE L1 -152 6014 5653 28 48 0 0 chr5 162858613 162858655 -40226877 + AT_rich Low_complexity Low_complexity 1 42 0 506 292 54 16 chr5 162858740 162858925 -40226607 + MIR SINE MIR 47 238 -24 1609 199 23 0 chr5 162859047 162859348 -40226184 - AluJo SINE Alu -4 308 1 399 47 0 31 chr5 162859377 162859441 -40226091 + L1PB3 LINE L1 6091 6152 -2 24 0 0 0 chr5 162859441 162859465 -40226067 + AT_rich Low_complexity Low_complexity 1 24 0 2874 159 38 25 chr5 162859465 162859601 -40225931 - L1MB3 LINE L1 -7 6987 6854 2378 94 0 3 chr5 162859601 162859908 -40225624 - AluSq SINE Alu -7 306 1 2874 159 38 25 chr5 162859908 162860319 -40225213 - L1MB3 LINE L1 -140 6854 6433 459 309 100 14 chr5 162861392 162861602 -40223930 + MIR SINE MIR 19 246 -16 338 283 89 44 chr5 162862446 162862626 -40222906 - L1ME3A LINE L1 -21 6149 5962 334 281 16 8 chr5 162862668 162862796 -40222736 - L1MC5 LINE L1 -480 7481 7353 1060 171 5 14 chr5 162862803 162863014 -40222518 - L1MB3 LINE L1 -544 6451 6243 737 144 0 25 chr5 162863027 162863145 -40222387 + FLAM_C SINE Alu 16 130 -13 3338 182 41 51 chr5 162863145 162863207 -40222325 - L1MB3 LINE L1 -738 6253 6192 2270 42 11 0 chr5 162863207 162863490 -40222042 - L1PA4 LINE L1 -3 6152 5867 3338 182 41 51 chr5 162863490 162863889 -40221643 - L1MB3 LINE L1 -799 6192 5791 334 20 0 40 chr5 162863889 162863939 -40221593 - L1PA4 LINE L1 -1 6154 6107 3338 182 41 51 chr5 162863939 162864521 -40221011 - L1MB3 LINE L1 -1200 5791 5232 348 229 0 0 chr5 162864525 162864608 -40220924 - L1MB3 LINE L1 -3693 3264 3182 477 236 6 22 chr5 162864893 162865075 -40220457 + CT-rich Low_complexity Low_complexity 2 180 0 1258 305 80 45 chr5 162865094 162865357 -40220175 - L1MB3 LINE L1 -5977 882 630 183 42 0 0 chr5 162865357 162865381 -40220151 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1258 305 80 45 chr5 162865381 162865934 -40219598 - L1MB3 LINE L1 -6229 630 11 786 242 17 101 chr5 162865959 162866294 -40219238 - L1MC5 LINE L1 -834 7127 6876 716 142 8 0 chr5 162866294 162866414 -40219118 - L1MA2 LINE L1 -16 6288 6168 786 242 17 101 chr5 162866414 162866648 -40218884 - L1MC5 LINE L1 -1085 6876 6624 310 219 14 0 chr5 162866939 162867012 -40218520 + L1MA10 LINE L1 6254 6327 -7 240 355 33 0 chr5 162867052 162867173 -40218359 - HAL1b LINE L1 -809 539 415 226 172 46 35 chr5 162867310 162867484 -40218048 + (TA)n Simple_repeat Simple_repeat 2 177 0 6879 70 0 2 chr5 162868753 162870041 -40215491 + L1PA7 LINE L1 4869 6154 0 544 268 73 0 chr5 162870306 162870470 -40215062 + MER5B DNA MER1_type 2 177 -1 288 229 9 46 chr5 162871445 162871554 -40213978 + L1ME4a LINE L1 5969 6073 -48 5461 182 51 35 chr5 162871651 162871969 -40213563 + L1MA10 LINE L1 4415 4727 -1607 411 68 0 0 chr5 162871969 162872021 -40213511 + L1PA16 LINE L1 6099 6157 -9 5461 182 51 35 chr5 162872021 162873575 -40211957 + L1MA10 LINE L1 4727 6318 -16 208 0 62 0 chr5 162874603 162874635 -40210897 + (TA)n Simple_repeat Simple_repeat 2 35 0 416 264 24 40 chr5 162877355 162877480 -40208052 - L2 LINE L2 0 3313 3191 24 32 0 0 chr5 162878762 162878793 -40206739 + AT_rich Low_complexity Low_complexity 1 31 0 319 278 84 96 chr5 162879672 162880006 -40205526 - L2 LINE L2 -36 3236 2907 446 257 149 17 chr5 162880585 162880760 -40204772 - MIR SINE MIR 0 262 65 208 190 3 0 chr5 162881646 162881689 -40203843 + MIR SINE MIR 110 154 -54 * 879 273 67 82 chr5 162881688 162881824 -40203708 + L2 LINE L2 2531 2667 -646 1978 145 14 0 chr5 162881824 162882120 -40203412 - AluSx SINE Alu -12 300 1 879 273 67 82 chr5 162882120 162882295 -40203237 + L2 LINE L2 2667 2843 -470 2563 62 0 0 chr5 162882295 162882602 -40202930 - AluY SINE Alu -4 307 1 879 273 67 82 chr5 162882602 162882913 -40202619 + L2 LINE L2 2843 3148 -165 1985 152 10 0 chr5 162882913 162883209 -40202323 - AluSx SINE Alu -13 299 1 218 310 196 59 chr5 162883729 162884255 -40201277 + L2 LINE L2 2310 2907 -407 221 349 32 8 chr5 162885888 162886014 -40199518 - MIR SINE MIR -13 249 121 515 326 58 18 chr5 162886106 162886330 -40199202 + MIR SINE MIR 30 262 0 390 308 41 27 chr5 162886678 162886824 -40198708 + MIR SINE MIR 1 148 -114 999 210 36 0 chr5 162886836 162887031 -40198501 + MER20 DNA MER1_type 1 202 -17 756 159 0 0 chr5 162887130 162887268 -40198264 + CT-rich Low_complexity Low_complexity 1 138 0 181 310 169 0 chr5 162887557 162887628 -40197904 + MIR SINE MIR 175 257 -5 260 137 20 0 chr5 162887646 162887697 -40197835 + CT-rich Low_complexity Low_complexity 1 52 0 185 277 125 9 chr5 162887894 162888006 -40197526 + MIR3 SINE MIR 65 189 -19 225 0 0 0 chr5 162888249 162888274 -40197258 + (T)n Simple_repeat Simple_repeat 1 25 0 2031 103 4 0 chr5 162888339 162888610 -40196922 - AluSq SINE Alu -41 272 1 24 0 0 0 chr5 162888905 162888929 -40196603 + AT_rich Low_complexity Low_complexity 1 24 0 318 276 63 134 chr5 162889141 162889380 -40196152 + MIR SINE MIR 41 262 0 213 36 89 18 chr5 162889422 162889478 -40196054 + (TA)n Simple_repeat Simple_repeat 1 60 0 224 274 72 98 chr5 162889726 162889879 -40195653 - L2 LINE L2 0 3272 3124 830 217 163 39 chr5 162890153 162890411 -40195121 + LTR50 LTR ERVL 1 290 -505 800 240 117 36 chr5 162890432 162890740 -40194792 + LTR50 LTR ERVL 462 794 -1 491 331 0 0 chr5 162891920 162892065 -40193467 - MIR SINE MIR -55 207 63 220 208 0 57 chr5 162892135 162892188 -40193344 - L2 LINE L2 0 3272 3223 2003 133 10 16 chr5 162893246 162893555 -40191977 + AluSx SINE Alu 3 309 -3 298 287 44 22 chr5 162894808 162894944 -40190588 - MLT1K LTR MaLR -2 586 448 388 301 48 27 chr5 162895282 162895428 -40190104 + MIR SINE MIR 48 196 -66 502 295 128 18 chr5 162895559 162895786 -40189746 - MIR SINE MIR -8 254 3 536 340 41 44 chr5 162897089 162897477 -40188055 - L3b LINE CR1 -83 1500 1114 463 379 6 6 chr5 162900839 162901021 -40184511 - MER5A DNA MER1_type -1 188 7 186 133 0 0 chr5 162901251 162901281 -40184251 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 94 0 0 chr5 162901711 162901743 -40183789 + (A)n Simple_repeat Simple_repeat 1 32 0 1127 195 29 0 chr5 162902959 162903169 -40182363 + MER20 DNA MER1_type 3 218 -1 213 349 0 0 chr5 162904020 162904083 -40181449 - L2 LINE L2 0 3313 3251 714 299 20 20 chr5 162904208 162904452 -40181080 - MIR SINE MIR -4 258 15 182 136 23 0 chr5 162905029 162905073 -40180459 + (TG)n Simple_repeat Simple_repeat 2 46 0 222 244 0 0 chr5 162905093 162905175 -40180357 + (TA)n Simple_repeat Simple_repeat 1 82 0 28 0 0 0 chr5 162906391 162906419 -40179113 + AT_rich Low_complexity Low_complexity 1 28 0 600 319 0 11 chr5 162908257 162908442 -40177090 + MIR SINE MIR 65 247 -15 216 0 0 0 chr5 162908820 162908844 -40176688 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 202 217 226 96 chr5 162912532 162912647 -40172885 + MER5A DNA MER1_type 60 189 0 12609 199 36 10 chr5 162912800 162914761 -40170771 + L1PB3 LINE L1 2443 4352 -2518 468 0 0 0 chr5 162914761 162914813 -40170719 + (TC)n Simple_repeat Simple_repeat 2 53 0 297 0 0 0 chr5 162914812 162914845 -40170687 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 12609 199 36 10 chr5 162914813 162914990 -40170542 + L1PB3 LINE L1 4352 4523 -2347 1228 219 42 52 chr5 162914990 162915277 -40170255 + AluJb SINE Alu 1 284 -18 198 0 0 0 chr5 162915278 162915300 -40170232 + (CA)n Simple_repeat Simple_repeat 1 22 0 12609 199 36 10 chr5 162915300 162917486 -40168046 + L1PB3 LINE L1 4522 6869 -1 326 77 58 0 chr5 162917515 162917567 -40167965 - L1P LINE L1 -1913 4233 4179 23740 51 5 3 chr5 162917576 162921394 -40164138 - L1PA5 LINE L1 -3 6151 2327 8492 57 4 9 chr5 162921388 162923274 -40162258 + L1PA5 LINE L1 4250 6149 -5 * 275 96 19 0 chr5 162923283 162923335 -40162197 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 182 265 118 0 chr5 162924144 162924212 -40161320 + MIR SINE MIR 67 142 -66 345 253 23 0 chr5 162924626 162924713 -40160819 + L1ME3A LINE L1 5899 5987 -183 924 240 25 0 chr5 162925706 162925910 -40159622 + MER20 DNA MER1_type 1 209 -10 186 118 0 0 chr5 162925948 162925982 -40159550 + (TG)n Simple_repeat Simple_repeat 1 34 0 299 354 39 15 chr5 162926381 162926511 -40159021 + MIR SINE MIR 17 149 -59 305 331 101 0 chr5 162926575 162926714 -40158818 - MIR SINE MIR -71 191 39 180 252 244 35 chr5 162926747 162926862 -40158670 + MIR SINE MIR 124 262 0 306 311 25 25 chr5 162927746 162927865 -40157667 - MIR SINE MIR -63 145 25 2460 70 0 25 chr5 162928093 162928408 -40157124 - AluSx SINE Alu -5 307 1 561 229 64 25 chr5 162928726 162928883 -40156649 - Zaphod DNA AcHobo -5 4026 3864 1407 196 69 39 chr5 162928893 162929483 -40156049 + LTR8 LTR ERV1 2 691 0 951 193 60 20 chr5 162929483 162929732 -40155800 - Zaphod DNA AcHobo -176 3855 3597 378 199 82 73 chr5 162929734 162930050 -40155482 - Zaphod DNA AcHobo -3043 988 670 769 195 208 35 chr5 162930052 162930370 -40155162 - Zaphod DNA AcHobo -3226 805 433 2845 163 25 11 chr5 162930388 162931035 -40154497 - MER39 LTR ERV1 -11 696 1 1153 246 133 55 chr5 162931040 162931109 -40154423 - Zaphod DNA AcHobo -3602 429 367 7713 20 3 0 chr5 162931109 162932194 -40153338 - L1PA3 LINE L1 -5 6150 5065 1153 246 133 55 chr5 162932194 162932522 -40153010 - Zaphod DNA AcHobo -3664 367 1 23 0 0 0 chr5 162932635 162932658 -40152874 + AT_rich Low_complexity Low_complexity 1 23 0 504 283 152 26 chr5 162933117 162933308 -40152224 - MIR SINE MIR -47 215 1 569 265 51 20 chr5 162934670 162934866 -40150666 - L2 LINE L2 0 3313 3112 209 194 0 0 chr5 162935006 162935042 -40150490 - L2 LINE L2 -28 3285 3250 590 276 102 16 chr5 162935066 162935293 -40150239 + MIR SINE MIR 8 249 -13 236 316 0 0 chr5 162935517 162935593 -40149939 + (CACCAT)n Simple_repeat Simple_repeat 4 79 0 334 289 55 23 chr5 162935633 162935761 -40149771 - MIR SINE MIR -14 248 117 32348 45 4 2 chr5 162935782 162939861 -40145671 - L1P LINE L1 -879 5267 1180 7719 56 1 7 chr5 162939861 162940837 -40144695 + L1P LINE L1 210 1179 -4967 670 234 108 19 chr5 162940885 162941102 -40144430 - MIR SINE MIR -24 238 4 263 360 36 76 chr5 162941283 162941380 -40144152 + L2 LINE L2 2665 2764 -550 796 184 50 6 chr5 162941380 162941559 -40143973 + MER53 DNA DNA 2 188 -1 263 360 36 76 chr5 162941559 162941764 -40143768 + L2 LINE L2 2764 2955 -359 326 284 118 0 chr5 162941907 162942034 -40143498 + L2 LINE L2 3167 3308 -5 2341 167 47 53 chr5 162942767 162943240 -40142292 + MER66B LTR ERV1 17 486 0 21 36 0 0 chr5 162943939 162943967 -40141565 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr5 162944411 162944451 -40141081 + AT_rich Low_complexity Low_complexity 1 40 0 2054 103 25 7 chr5 162944828 162945109 -40140423 + AluSq SINE Alu 1 286 -27 893 220 49 4 chr5 162946194 162946458 -40139074 - MER33 DNA MER1_type -24 300 25 458 275 183 0 chr5 162946491 162946633 -40138899 + MER5A DNA MER1_type 14 181 -8 180 179 0 0 chr5 162946635 162946674 -40138858 + (TTA)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr5 162947622 162947651 -40137881 + (T)n Simple_repeat Simple_repeat 1 29 0 11811 190 22 27 chr5 162948217 162951929 -40133603 + L1MA7 LINE L1 2538 6230 -61 1940 133 18 0 chr5 162951929 162952214 -40133318 + AluSg SINE Alu 1 290 -20 11811 190 22 27 chr5 162952214 162952276 -40133256 + L1MA7 LINE L1 6230 6291 0 189 348 25 44 chr5 162952299 162952457 -40133075 - L2 LINE L2 -835 2479 2325 1634 152 64 64 chr5 162954171 162954546 -40130986 + THE1C LTR MaLR 1 375 0 246 298 77 10 chr5 162954702 162954806 -40130726 + MER46C DNA MER2_type 73 183 -155 365 339 57 26 chr5 162954964 162955156 -40130376 - MIR SINE MIR -45 217 20 21 0 0 0 chr5 162955185 162955206 -40130326 + AT_rich Low_complexity Low_complexity 1 21 0 2039 128 3 3 chr5 162955740 162956037 -40129495 - AluSx SINE Alu -15 297 1 6599 58 20 29 chr5 162956199 162957779 -40127753 + L1PA7 LINE L1 4359 5829 -325 1001 102 0 182 chr5 162957779 162958015 -40127517 - 7SK RNA RNA 0 193 1 6599 58 20 29 chr5 162958015 162958339 -40127193 + L1PA7 LINE L1 5829 6154 0 398 356 83 25 chr5 162958431 162958757 -40126775 - L1MC/D LINE L1 -2169 5639 5295 2074 113 0 0 chr5 162958818 162959156 -40126376 - AluSc SINE Alu 0 338 1 262 243 110 22 chr5 162959383 162959519 -40126013 - L1ME LINE L1 -632 5534 5387 1112 316 66 60 chr5 162959620 162960590 -40124942 - L1ME LINE L1 -1441 4705 3730 1825 150 38 91 chr5 162960712 162961184 -40124348 + L1MA7 LINE L1 5845 6291 0 255 61 0 0 chr5 162961328 162961361 -40124171 + (TC)n Simple_repeat Simple_repeat 1 33 0 426 297 86 17 chr5 162963418 162963593 -40121939 - MIR SINE MIR -48 214 28 322 369 35 35 chr5 162963656 162963970 -40121562 - L1ME LINE L1 -2454 3692 3379 263 244 33 0 chr5 162963978 162964068 -40121464 + (TA)n Simple_repeat Simple_repeat 1 93 0 1860 118 4 0 chr5 162964228 162964506 -40121026 - AluSq SINE Alu 0 308 30 326 287 115 50 chr5 162964538 162964964 -40120568 - L1ME LINE L1 -3046 3100 2582 491 0 17 0 chr5 162964964 162965023 -40120509 + (TA)n Simple_repeat Simple_repeat 2 61 0 326 287 115 50 chr5 162965023 162965155 -40120377 - L1ME LINE L1 -3564 2582 2460 2749 13 0 0 chr5 162965611 162965913 -40119619 - AluYa5 SINE Alu -9 302 1 214 182 0 0 chr5 162967109 162967153 -40118379 + T-rich Low_complexity Low_complexity 2 45 0 2212 63 3 14 chr5 162968502 162968840 -40116692 + AluY SINE Alu 1 335 0 24 0 0 0 chr5 162969662 162969686 -40115846 + AT_rich Low_complexity Low_complexity 1 24 0 222 321 15 67 chr5 162970123 162970257 -40115275 - MIR SINE MIR -76 186 60 365 239 34 0 chr5 162970343 162970431 -40115101 - MLT1G LTR MaLR -42 548 458 710 244 51 60 chr5 162970660 162970762 -40114770 - MIR SINE MIR 0 262 161 1819 106 97 26 chr5 162970762 162971112 -40114420 + THE1C LTR MaLR 1 375 0 710 244 51 60 chr5 162971112 162971226 -40114306 - MIR SINE MIR -101 161 48 1670 276 89 6 chr5 162971315 162971807 -40113725 + MLT1G LTR MaLR 16 548 -42 339 341 32 0 chr5 162972541 162972667 -40112865 - L2 LINE L2 0 3313 3184 21 0 0 31 chr5 162972846 162972862 -40112670 + AT_rich Low_complexity Low_complexity 1 16 -15 2662 173 13 4 chr5 162972862 162973389 -40112143 - L1MA5 LINE L1 0 6300 5769 21 0 0 31 chr5 162973389 162973404 -40112128 + AT_rich Low_complexity Low_complexity 16 31 0 14709 20 0 0 chr5 162973404 162975899 -40109633 - L1HS LINE L1 0 6155 3661 1250 182 0 0 chr5 162975896 162976116 -40109416 - L1MA5 LINE L1 -509 5791 5572 * 5187 184 13 7 chr5 162976240 162978732 -40106800 - L1PA15 LINE L1 -13 6152 3567 6582 66 19 5 chr5 162978732 162979902 -40105630 - L1PA7 LINE L1 -2 6152 4982 4856 103 14 0 chr5 162979902 162980632 -40104900 - L1P LINE L1 -1091 5055 4316 16160 108 8 1 chr5 162980635 162983025 -40102507 + L1P LINE L1 1944 4348 -1798 2887 227 23 10 chr5 162982996 162983789 -40101743 - L1PA15 LINE L1 -2571 3575 2773 * 11179 192 36 73 chr5 162983846 162985218 -40100314 - L1M2 LINE L1 -743 6465 5044 264 30 0 0 chr5 162985218 162985251 -40100281 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 11179 192 36 73 chr5 162985251 162986134 -40099398 - L1M2 LINE L1 -2164 5044 4130 988 123 0 123 chr5 162986134 162986329 -40099203 - AluSg/x SINE Alu -6 306 136 11179 192 36 73 chr5 162986329 162988958 -40096574 - L1M2 LINE L1 -3078 4130 1736 2072 276 69 25 chr5 162988991 162989719 -40095813 - L1M2 LINE L1 -6435 774 15 19984 181 26 15 chr5 162989990 162993541 -40091991 - L1 LINE L1 -3471 4094 584 186 43 0 0 chr5 162993541 162993564 -40091968 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7557 25 5 0 chr5 162993567 162995152 -40090380 - L1PA4 LINE L1 -5 6150 4562 19984 181 26 15 chr5 162995152 162995621 -40089911 - L1 LINE L1 -6982 583 16 267 178 14 55 chr5 162995625 162995698 -40089834 - L1M1 LINE L1 -3958 3148 3079 463 194 1 10 chr5 162995700 162995807 -40089725 - L1M1 LINE L1 -4949 2088 1975 39 60 0 0 chr5 162996362 162996429 -40089103 + AT_rich Low_complexity Low_complexity 1 67 0 1656 203 39 56 chr5 162996690 162997104 -40088428 + L1M3e LINE L1 10 416 -6614 443 151 0 14 chr5 162997120 162997193 -40088339 + MER58 DNA MER1_type 2348 2419 -1 314 352 84 0 chr5 162997202 162997344 -40088188 - MER117 DNA MER1_type 0 197 44 1531 247 71 17 chr5 162997430 162997851 -40087681 + LTR16C LTR ERVL 48 491 0 473 139 0 38 chr5 162999166 162999245 -40086287 - MER1B DNA MER1_type -4 325 250 1619 160 11 11 chr5 162999282 162999551 -40085981 - MER1B DNA MER1_type -70 269 1 209 278 123 80 chr5 162999554 162999741 -40085791 + L2 LINE L2 3086 3280 -33 199 217 17 26 chr5 162999858 162999973 -40085559 + (TA)n Simple_repeat Simple_repeat 2 115 0 475 267 48 41 chr5 163000804 163000950 -40084582 - MIR SINE MIR 0 262 116 369 292 50 8 chr5 163001010 163001130 -40084402 - L2 LINE L2 0 3313 3189 259 235 103 0 chr5 163001734 163001802 -40083730 + LTR16A1 LTR ERVL 381 455 -2 906 339 83 39 chr5 163001804 163002668 -40082864 + HERV16 LTR ERVL 1 902 -4094 707 324 23 43 chr5 163002708 163003057 -40082475 + HERV16 LTR ERVL 958 1299 -3697 264 289 13 0 chr5 163003292 163003368 -40082164 + LTR16A1 LTR ERVL 381 457 0 2122 123 3 0 chr5 163003780 163004081 -40081451 - AluSx SINE Alu -10 302 1 504 280 69 23 chr5 163005014 163005189 -40080343 + MIR SINE MIR 72 254 -8 1734 129 19 4 chr5 163007046 163007302 -40078230 - AluSq SINE Alu -53 260 1 444 338 150 9 chr5 163007355 163007568 -40077964 + MIR SINE MIR 2 244 -18 236 324 102 9 chr5 163007779 163007887 -40077645 - MER5A DNA MER1_type -70 119 2 261 118 59 73 chr5 163008631 163008699 -40076833 + MER5A DNA MER1_type 3 69 -120 422 374 23 18 chr5 163008758 163008929 -40076603 + L3 LINE CR1 1406 1577 0 272 360 25 46 chr5 163009363 163009560 -40075972 - MIR SINE MIR -50 212 20 3781 215 82 33 chr5 163009577 163010782 -40074750 - Charlie1a DNA MER1_type 0 1455 192 30386 109 8 25 chr5 163010788 163014111 -40071421 - L1PA7 LINE L1 0 6469 3213 1913 138 0 0 chr5 163014111 163014387 -40071145 - AluSq SINE Alu -5 308 33 30386 109 8 25 chr5 163014387 163017305 -40068227 - L1PA7 LINE L1 -3256 3213 246 810 209 57 50 chr5 163017305 163017602 -40067930 + pTR5 LTR ERV1 743 1041 -1397 3925 73 50 168 chr5 163017775 163018555 -40066977 + LTR12 LTR ERV1 1 688 0 1509 80 0 19 chr5 163018556 163018768 -40066764 - L1P3 LINE L1 -6213 248 41 675 244 35 0 chr5 163018768 163018940 -40066592 - Charlie1a DNA MER1_type -1254 201 24 206 304 0 0 chr5 163019416 163019462 -40066070 + L2 LINE L2 3184 3229 -43 1313 220 45 3 chr5 163019502 163020060 -40065472 - MER82 DNA MER2_type -1 652 1 1892 213 17 23 chr5 163020224 163020694 -40064838 + MLT1C LTR MaLR 1 467 0 1156 186 9 47 chr5 163021686 163021737 -40063795 - L1MB3 LINE L1 -1 6182 6131 2476 51 0 10 chr5 163021737 163022049 -40063483 - AluY SINE Alu -2 309 1 1156 186 9 47 chr5 163022049 163022315 -40063217 - L1MB3 LINE L1 -52 6131 5877 350 302 83 29 chr5 163022338 163022543 -40062989 - MIR SINE MIR -13 249 34 232 321 24 12 chr5 163022694 163022778 -40062754 + L2 LINE L2 3191 3275 -38 1150 242 27 4 chr5 163022785 163023041 -40062491 + Tigger7 DNA MER2_type 3 264 -469 322 245 21 11 chr5 163023042 163023136 -40062396 + Tigger7 DNA MER2_type 2391 2485 -2 363 343 70 7 chr5 163024835 163024978 -40060554 + MIR SINE MIR 1 152 -110 386 326 0 29 chr5 163025045 163025183 -40060349 - L2 LINE L2 0 3313 3180 701 366 37 13 chr5 163026029 163026516 -40059016 - L2 LINE L2 -146 3167 2667 206 351 0 13 chr5 163027225 163027302 -40058230 + L2 LINE L2 3180 3255 -58 230 362 50 14 chr5 163027454 163027595 -40057937 - L2 LINE L2 0 3313 3168 2216 128 0 28 chr5 163028170 163028490 -40057042 + AluSx SINE Alu 1 311 -1 398 330 169 14 chr5 163028617 163028978 -40056554 + L2 LINE L2 2896 3312 -1 189 0 0 0 chr5 163029038 163029059 -40056473 + (TA)n Simple_repeat Simple_repeat 1 21 0 4874 138 15 2 chr5 163029060 163029872 -40055660 - L1PA15 LINE L1 -10 6155 5334 338 208 0 14 chr5 163030090 163030162 -40055370 + MIR3 SINE MIR 130 200 -8 594 289 91 9 chr5 163030632 163030864 -40054668 + MIR SINE MIR 8 258 -4 376 375 27 31 chr5 163031276 163031535 -40053997 + MIR SINE MIR 5 262 0 384 59 0 0 chr5 163031660 163031711 -40053821 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1879 182 62 20 chr5 163032057 163032458 -40053074 - MSTB LTR MaLR -8 418 1 270 281 106 36 chr5 163032963 163033323 -40052209 - L1MC5 LINE L1 -280 7681 7297 403 381 51 10 chr5 163033389 163033586 -40051946 + L1ME LINE L1 138 342 -5863 2641 83 103 5 chr5 163033697 163034105 -40051427 - LTR7 LTR ERV1 -2 448 1 2214 96 50 13 chr5 163034105 163034481 -40051051 - HERVH LTR ERV1 0 7713 7324 1259 110 53 0 chr5 163034481 163034690 -40050842 - HERVH LTR ERV1 -1894 5819 5600 3584 115 2 0 chr5 163034691 163035222 -40050310 - HERVH LTR ERV1 -2564 5149 4618 * 5353 101 1 2 chr5 163035220 163036034 -40049498 - HERVH LTR ERV1 -3761 3952 3140 * 11599 107 14 27 chr5 163036013 163038317 -40047215 - HERVH LTR ERV1 -4718 2995 793 2804 109 14 5 chr5 163038392 163038834 -40046698 - HERVH LTR ERV1 -7267 446 1 2620 90 98 5 chr5 163038836 163039246 -40046286 - LTR7 LTR ERV1 -2 448 1 1466 206 8 12 chr5 163039463 163039843 -40045689 + L1MA7 LINE L1 5013 5385 -771 222 171 0 0 chr5 163039876 163039917 -40045615 + (TG)n Simple_repeat Simple_repeat 2 42 0 3753 189 43 16 chr5 163039945 163040333 -40045199 + L1MA7 LINE L1 5395 5771 -520 411 83 0 0 chr5 163040333 163040393 -40045139 + (TA)n Simple_repeat Simple_repeat 1 60 0 3753 189 43 16 chr5 163040393 163040867 -40044665 + L1MA7 LINE L1 5771 6280 -11 1801 269 73 101 chr5 163040941 163042651 -40042881 + L1ME LINE L1 662 2323 -4073 594 216 55 0 chr5 163042678 163042859 -40042673 + L1ME LINE L1 2399 2589 -3626 2792 13 0 0 chr5 163042861 163043168 -40042364 + AluYa5 SINE Alu 1 307 -4 481 206 20 0 chr5 163043185 163043287 -40042245 - MLT1D LTR MaLR -397 108 5 190 203 14 14 chr5 163043349 163043418 -40042114 + CT-rich Low_complexity Low_complexity 2 70 0 282 325 26 34 chr5 163043783 163043900 -40041632 - L2 LINE L2 -12 3301 3186 526 232 40 24 chr5 163045140 163045265 -40040267 + L2 LINE L2 3184 3310 -3 280 264 28 0 chr5 163045552 163045624 -40039908 - MLT1L LTR MaLR -128 487 414 619 222 111 6 chr5 163045806 163045968 -40039564 - L2 LINE L2 -1047 2267 2089 364 250 0 0 chr5 163045962 163046046 -40039486 + MIR SINE MIR 68 151 -111 * 39256 46 3 4 chr5 163046187 163052074 -40033458 - L1PA4 LINE L1 0 6155 278 15518 171 53 23 chr5 163052272 163053813 -40031719 + L1MA1 LINE L1 13 1507 -6214 288 0 0 0 chr5 163053813 163053845 -40031687 + (GA)n Simple_repeat Simple_repeat 1 32 0 15518 171 53 23 chr5 163053845 163053996 -40031536 + L1MA1 LINE L1 1507 1652 -6069 300 109 0 0 chr5 163053996 163054042 -40031490 - MADE1 DNA Mariner -34 46 1 15518 171 53 23 chr5 163054042 163055087 -40030445 + L1MA1 LINE L1 1652 2664 -5057 2374 70 0 3 chr5 163055087 163055373 -40030159 + AluY SINE Alu 13 297 -14 15518 171 53 23 chr5 163055373 163055647 -40029885 + L1MA1 LINE L1 2664 2928 -4793 1771 161 102 15 chr5 163055647 163055982 -40029550 + THE1B LTR MaLR 1 364 0 15518 171 53 23 chr5 163055982 163057628 -40027904 + L1MA1 LINE L1 2928 4523 -3198 2029 129 0 35 chr5 163057628 163057938 -40027594 + AluY SINE Alu 1 299 -12 15518 171 53 23 chr5 163057938 163060714 -40024818 + L1MA1 LINE L1 4523 7721 0 1074 322 63 12 chr5 163062306 163062735 -40022797 - L2 LINE L2 -5 3308 2858 3851 226 22 24 chr5 163062951 163064012 -40021520 - L1MD2 LINE L1 0 6359 5301 2215 111 7 0 chr5 163064024 163064322 -40021210 - AluSp SINE Alu -13 300 1 197 81 0 54 chr5 163064345 163064382 -40021150 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 1553 321 71 5 chr5 163064398 163064975 -40020557 - L1MDb LINE L1 -5792 617 3 704 231 0 97 chr5 163064997 163065296 -40020236 - L1MD2 LINE L1 -17 6342 6073 705 183 83 0 chr5 163065313 163065482 -40020050 + L1MD2 LINE L1 5853 6035 -324 * 3651 157 17 9 chr5 163065478 163066172 -40019360 - L1MC1 LINE L1 -205 6128 5429 * 5101 116 12 46 chr5 163066164 163067145 -40018387 - L1PA8A LINE L1 0 6131 5185 2549 206 19 9 chr5 163067166 163067743 -40017789 - L1MB2 LINE L1 -3 6168 5586 845 211 50 105 chr5 163067743 163068127 -40017405 + MLT1A1 LTR MaLR 1 365 0 1056 204 0 0 chr5 163068127 163068328 -40017204 - L1MB2 LINE L1 -581 5590 5390 1713 223 22 6 chr5 163068328 163068687 -40016845 + MLT1A1 LTR MaLR 1 365 0 838 257 42 81 chr5 163068700 163069156 -40016376 - L1MB2 LINE L1 -846 5300 4863 208 313 161 0 chr5 163070479 163070591 -40014941 + L2 LINE L2 3143 3272 0 2059 122 9 44 chr5 163070682 163071002 -40014530 - AluSx SINE Alu -1 311 3 487 227 124 16 chr5 163071138 163071323 -40014209 + LTR52 LTR ERVL 211 415 -6 197 83 28 0 chr5 163072348 163072384 -40013148 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 208 171 0 24 chr5 163072838 163072879 -40012653 + GA-rich Low_complexity Low_complexity 3 42 0 362 296 0 37 chr5 163073253 163073361 -40012171 - L2 LINE L2 0 3272 3169 1873 144 90 0 chr5 163074123 163074456 -40011076 - THE1B LTR MaLR -1 363 1 9778 123 33 34 chr5 163074456 163076038 -40009494 - THE1B-int LTR MaLR 0 1580 1 2158 131 31 14 chr5 163076038 163076396 -40009136 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 163076874 163076895 -40008637 + AT_rich Low_complexity Low_complexity 1 21 0 401 229 83 0 chr5 163077311 163077407 -40008125 - MIR SINE MIR 0 262 159 354 308 0 15 chr5 163077407 163077537 -40007995 - LTR33 LTR ERVL 0 521 394 266 359 20 32 chr5 163077998 163078249 -40007283 - HERVL LTR ERVL -4277 1377 1130 992 311 69 14 chr5 163079137 163079629 -40005903 - LTR33 LTR ERVL -2 519 1 2186 91 7 20 chr5 163079636 163079932 -40005600 + AluSc SINE Alu 6 297 -12 348 321 102 7 chr5 163079940 163080077 -40005455 - MIR SINE MIR -102 160 11 348 320 31 23 chr5 163080200 163080328 -40005204 - MIR SINE MIR -56 152 24 297 128 0 0 chr5 163080364 163080411 -40005121 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 267 261 15 0 chr5 163081367 163081432 -40004100 - L2 LINE L2 -7 3306 3241 301 316 53 13 chr5 163081796 163081948 -40003584 + MIR SINE MIR 103 260 -2 249 187 0 0 chr5 163082556 163082602 -40002930 - MIR SINE MIR -105 157 113 473 325 141 30 chr5 163082882 163083316 -40002216 + L2 LINE L2 2832 3313 0 306 73 0 0 chr5 163083863 163083904 -40001628 + (CA)n Simple_repeat Simple_repeat 1 41 0 273 347 40 60 chr5 163084106 163084305 -40001227 - MIR SINE MIR 0 262 68 757 313 42 4 chr5 163084406 163084646 -40000886 - MIR SINE MIR -10 252 4 347 360 13 7 chr5 163084979 163085132 -40000400 + L2 LINE L2 3159 3312 -1 274 246 0 0 chr5 163085292 163085353 -40000179 + MIR SINE MIR 86 146 -116 4218 75 8 10 chr5 163085360 163085956 -39999576 + L1MA1 LINE L1 5705 6299 -3 180 77 0 0 chr5 163086960 163086986 -39998546 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 2267 109 0 0 chr5 163087141 163087434 -39998098 - AluSg SINE Alu -17 293 1 245 320 109 0 chr5 163087486 163087614 -39997918 - L1ME LINE L1 -502 5619 5478 507 336 81 8 chr5 163087737 163087972 -39997560 + MIR SINE MIR 11 262 0 494 319 79 21 chr5 163088003 163088244 -39997288 + L3 LINE CR1 1084 1338 -239 401 308 148 20 chr5 163088275 163088758 -39996774 + MLT1K LTR MaLR 2 573 -15 226 374 52 26 chr5 163088762 163088917 -39996615 + L3 LINE CR1 1412 1570 -7 470 288 101 10 chr5 163089042 163089240 -39996292 + LTR33 LTR ERVL 1 216 -305 333 318 39 8 chr5 163090318 163090447 -39995085 + MIR SINE MIR 12 144 -118 273 314 53 102 chr5 163090691 163090994 -39994538 - L2 LINE L2 -376 2938 2651 457 263 53 0 chr5 163091772 163091886 -39993646 - L2 LINE L2 0 3313 3194 240 221 284 24 chr5 163092030 163092157 -39993375 + MER5A DNA MER1_type 8 167 -22 298 254 154 0 chr5 163092334 163092444 -39993088 - MIR SINE MIR -26 236 110 648 291 0 48 chr5 163092760 163092970 -39992562 - MIR SINE MIR -6 256 57 2308 102 3 0 chr5 163093087 163093392 -39992140 - AluSp SINE Alu -7 306 1 1878 160 0 22 chr5 163093414 163093733 -39991799 + AluJb SINE Alu 1 312 0 25 0 0 0 chr5 163093796 163093821 -39991711 + AT_rich Low_complexity Low_complexity 1 25 0 1364 134 202 24 chr5 163093839 163094092 -39991440 - AluSg1 SINE Alu -11 298 1 373 258 35 25 chr5 163094127 163094246 -39991286 - MIR3 SINE MIR -45 163 43 238 224 65 35 chr5 163094389 163094498 -39991034 - MIR SINE MIR -81 181 69 1909 158 0 31 chr5 163094851 163095173 -39990359 + AluJo SINE Alu 1 312 0 2370 92 3 10 chr5 163095383 163095697 -39989835 + AluSp SINE Alu 1 312 -1 675 45 0 0 chr5 163096090 163096179 -39989353 + L1MA1 LINE L1 6214 6302 0 1850 166 0 16 chr5 163096183 163096496 -39989036 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr5 163096496 163096517 -39989015 + AT_rich Low_complexity Low_complexity 1 21 0 602 133 177 9 chr5 163096717 163096830 -39988702 + AluJo SINE Alu 1 132 -170 358 231 39 0 chr5 163096831 163096909 -39988623 + AluJo SINE Alu 132 212 -90 1074 139 24 0 chr5 163096910 163097075 -39988457 + AluJ SINE Alu 114 282 -30 26 0 0 0 chr5 163097106 163097132 -39988400 + AT_rich Low_complexity Low_complexity 1 26 0 513 161 15 85 chr5 163097216 163097346 -39988186 + MER103 DNA DNA 11 131 -35 221 282 120 51 chr5 163097809 163097926 -39987606 + MIR SINE MIR 36 160 -102 1226 164 28 5 chr5 163098237 163098451 -39987081 + MER20 DNA MER1_type 1 219 0 202 263 35 0 chr5 163099194 163099251 -39986281 + MIR3 SINE MIR 111 169 -39 186 339 45 41 chr5 163100029 163100250 -39985282 + L2 LINE L2 2489 2710 -604 682 254 60 32 chr5 163100770 163100987 -39984545 - MIR SINE MIR -25 237 15 11212 54 14 5 chr5 163104071 163105646 -39979886 - L1P LINE L1 -2225 3921 2333 9111 39 6 0 chr5 163105646 163107540 -39977992 + L1PA4 LINE L1 4250 6150 -5 186 43 0 0 chr5 163107543 163107566 -39977966 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 16421 176 27 15 chr5 163107566 163111066 -39974466 + L1M1 LINE L1 498 4049 -3516 1845 279 69 25 chr5 163111388 163112116 -39973416 + L1M2 LINE L1 15 774 -6435 9440 194 39 88 chr5 163112153 163114760 -39970772 + L1M2 LINE L1 1740 4474 -2875 987 139 0 115 chr5 163114760 163114969 -39970563 + AluSg/x SINE Alu 120 304 -6 9440 194 39 88 chr5 163114969 163115924 -39969608 + L1M2 LINE L1 4474 5474 -1875 264 30 0 0 chr5 163115924 163115957 -39969575 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 9440 194 39 88 chr5 163115957 163117329 -39968203 + L1M2 LINE L1 5474 6606 -743 2676 229 22 8 chr5 163117402 163118179 -39967353 + L1M1 LINE L1 4207 4994 -2571 * 13628 106 8 2 chr5 163118150 163120540 -39964992 - L1P LINE L1 -1798 4348 1944 4856 103 14 0 chr5 163120543 163121273 -39964259 + L1P LINE L1 4316 5055 -1091 6597 64 11 12 chr5 163121273 163122443 -39963089 + L1PA7 LINE L1 4982 6152 -2 7093 169 23 2 chr5 163122443 163124340 -39961192 + L1P4 LINE L1 4986 6980 -604 3482 206 24 22 chr5 163124343 163125290 -39960242 - L1 LINE L1 -2660 3486 2538 333 0 0 0 chr5 163125856 163125893 -39959639 + (A)n Simple_repeat Simple_repeat 1 37 0 180 179 0 0 chr5 163126841 163126880 -39958652 + (TAA)n Simple_repeat Simple_repeat 2 40 0 458 275 183 0 chr5 163126882 163127024 -39958508 - MER5A DNA MER1_type -8 181 14 905 216 49 4 chr5 163127057 163127321 -39958211 + MER33 DNA MER1_type 25 300 -24 2069 100 25 7 chr5 163128406 163128687 -39956845 - AluSq SINE Alu -27 286 1 33 25 0 0 chr5 163129064 163129104 -39956428 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr5 163129548 163129576 -39955956 + AT_rich Low_complexity Low_complexity 1 28 0 2267 166 46 61 chr5 163130275 163130752 -39954780 - MER66B LTR ERV1 0 486 17 326 284 118 0 chr5 163131485 163131612 -39953920 - L2 LINE L2 -5 3308 3167 276 356 36 76 chr5 163131755 163131960 -39953572 - L2 LINE L2 -359 2955 2764 796 184 50 6 chr5 163131960 163132139 -39953393 - MER53 DNA DNA -1 188 2 276 356 36 76 chr5 163132139 163132236 -39953296 - L2 LINE L2 -550 2764 2665 678 239 108 19 chr5 163132418 163132635 -39952897 + MIR SINE MIR 4 238 -24 7612 58 4 7 chr5 163132683 163133656 -39951876 - L1P LINE L1 -4967 1179 210 32375 45 4 2 chr5 163133656 163137736 -39947796 + L1P LINE L1 1180 5267 -879 334 289 55 23 chr5 163137757 163137885 -39947647 + MIR SINE MIR 117 248 -14 236 316 0 0 chr5 163137925 163138001 -39947531 + (ATGGTG)n Simple_repeat Simple_repeat 4 79 0 555 253 138 6 chr5 163138225 163138399 -39947133 - MIR SINE MIR -13 249 53 194 306 0 14 chr5 163188433 163188505 -39897027 + MIR SINE MIR 192 262 0 489 319 79 21 chr5 163188536 163188777 -39896755 + L3 LINE CR1 1084 1338 -239 510 294 141 31 chr5 163188808 163189291 -39896241 + MLT1K LTR MaLR 2 573 -15 218 381 52 26 chr5 163189295 163189450 -39896082 + L3 LINE CR1 1412 1570 -7 636 318 91 26 chr5 163189575 163189927 -39895605 + LTR33 LTR ERVL 1 375 -146 293 307 216 18 chr5 163190305 163190523 -39895009 + MIR SINE MIR 2 262 0 284 233 27 0 chr5 163190589 163190662 -39894870 - Charlie8 DNA MER1_type -1 2416 2342 323 299 47 81 chr5 163190797 163191008 -39894524 - Charlie8 DNA MER1_type -2181 236 33 268 243 57 57 chr5 163191871 163191941 -39893591 - L2 LINE L2 -1 3312 3243 621 280 63 14 chr5 163192147 163192354 -39893178 + MIR SINE MIR 30 246 -16 27 49 0 0 chr5 163192364 163192405 -39893127 + AT_rich Low_complexity Low_complexity 1 41 0 229 195 0 0 chr5 163192755 163192796 -39892736 - MLT1K LTR MaLR -16 572 532 210 345 95 0 chr5 163195062 163195178 -39890354 + L2 LINE L2 3187 3313 0 189 107 0 0 chr5 163195464 163195492 -39890040 + (T)n Simple_repeat Simple_repeat 1 28 0 5408 29 0 0 chr5 163195495 163196121 -39889411 - L1PA3 LINE L1 -4 6151 5526 286 279 74 8 chr5 163196212 163196334 -39889198 + MER103 DNA DNA 37 166 0 186 260 0 20 chr5 163196559 163196609 -39888923 - MIR SINE MIR -1 261 213 219 208 0 21 chr5 163196902 163196950 -39888582 + (TA)n Simple_repeat Simple_repeat 1 47 0 2169 97 3 26 chr5 163196968 163197278 -39888254 - AluSx SINE Alu -9 303 1 596 319 124 13 chr5 163197288 163197602 -39887930 - L1MC4 LINE L1 -1040 7002 6654 2114 115 0 35 chr5 163197739 163198051 -39887481 + AluSx SINE Alu 1 301 -11 1050 239 157 23 chr5 163198293 163198778 -39886754 - L1MC4a LINE L1 -1747 6061 5512 540 254 55 30 chr5 163198780 163198945 -39886587 - MLT1H LTR MaLR 0 549 381 376 231 120 9 chr5 163198951 163199059 -39886473 + MIR SINE MIR 121 240 -22 4852 177 42 13 chr5 163199065 163200242 -39885290 + L1MB5 LINE L1 4979 6173 -1 476 255 35 14 chr5 163200257 163200402 -39885130 + L1MC5 LINE L1 7782 7929 -32 431 253 47 41 chr5 163200893 163201063 -39884469 - MLT1K LTR MaLR -22 566 396 333 255 201 13 chr5 163201690 163201839 -39883693 - MIR SINE MIR 0 262 86 231 338 0 0 chr5 163201970 163202050 -39883482 - MIR SINE MIR -17 245 166 5711 137 32 23 chr5 163202143 163202272 -39883260 + L1MA5A LINE L1 5185 5311 -986 2242 92 3 0 chr5 163202272 163202575 -39882957 - AluY SINE Alu -7 304 1 5711 137 32 23 chr5 163202575 163203540 -39881992 + L1MA5A LINE L1 5311 6293 -4 1184 294 96 26 chr5 163204103 163204815 -39880717 - L2 LINE L2 0 3313 2553 235 237 17 0 chr5 163204874 163204933 -39880599 - L2 LINE L2 -900 2414 2355 317 160 0 0 chr5 163204969 163205019 -39880513 - L2 LINE L2 -1 3312 3263 302 322 0 0 chr5 163205049 163205147 -39880385 - MIR SINE MIR -70 138 41 3208 183 54 19 chr5 163206550 163207249 -39878283 - LTR8A LTR ERV1 0 727 4 1759 190 40 92 chr5 163207542 163207709 -39877823 - MLT1D LTR MaLR -2 503 329 2518 116 3 24 chr5 163207709 163208090 -39877442 - THE1C LTR MaLR -2 373 1 1759 190 40 92 chr5 163208090 163208453 -39877079 - MLT1D LTR MaLR -176 329 1 302 279 100 36 chr5 163208539 163208679 -39876853 - MER117 DNA MER1_type -42 155 7 1309 258 77 38 chr5 163208786 163208869 -39876663 - L1M4 LINE L1 -1698 4448 4370 7290 39 0 0 chr5 163208869 163209786 -39875746 - L1PA5 LINE L1 -5 6149 5227 1309 258 77 38 chr5 163209786 163210077 -39875455 - L1M4 LINE L1 -1776 4370 4092 1923 102 0 0 chr5 163210077 163210350 -39875182 - AluY SINE Alu 0 312 40 1309 258 77 38 chr5 163210350 163210609 -39874923 - L1M4 LINE L1 -2054 4092 3788 2150 111 47 41 chr5 163210669 163211031 -39874501 - THE1B LTR MaLR 0 364 1 452 306 59 18 chr5 163211039 163211475 -39874057 - L1MEc LINE L1 -4810 1730 1298 5235 152 13 28 chr5 163211665 163212582 -39872950 + MER4D LTR ERV1 1 903 0 194 308 31 0 chr5 163212987 163213052 -39872480 + L2 LINE L2 2992 3058 -214 369 337 38 11 chr5 163213525 163213709 -39871823 - L2 LINE L2 -5 3308 3120 28 29 0 0 chr5 163213967 163214002 -39871530 + AT_rich Low_complexity Low_complexity 1 35 0 226 274 97 32 chr5 163214195 163214319 -39871213 + MIR SINE MIR 57 188 -74 2317 94 0 7 chr5 163214366 163214665 -39870867 - AluSg SINE Alu -13 297 1 305 213 67 0 chr5 163214670 163214745 -39870787 + L1MDa LINE L1 50 129 -6411 2808 216 40 96 chr5 163214834 163216645 -39868887 - L1MCb LINE L1 -4848 1716 1 3539 214 21 8 chr5 163217138 163218547 -39866985 + L1MB5 LINE L1 4472 5899 -275 1000 211 151 36 chr5 163219705 163220009 -39865523 + MSTD LTR MaLR 19 357 -39 707 176 62 143 chr5 163220010 163220282 -39865250 + AluJo SINE Alu 11 260 -52 223 129 81 8 chr5 163220351 163220475 -39865057 + (TA)n Simple_repeat Simple_repeat 2 134 0 318 179 0 0 chr5 163220532 163220588 -39864944 + MSTD LTR MaLR 341 396 0 345 317 48 70 chr5 163220670 163220900 -39864632 + MLT1K LTR MaLR 3 227 -361 421 221 144 67 chr5 163220972 163221167 -39864365 + MLT1K LTR MaLR 377 586 -2 491 311 122 22 chr5 163221940 163222162 -39863370 - MIR SINE MIR -16 246 3 824 279 117 33 chr5 163222290 163222777 -39862755 + L2 LINE L2 1746 2273 -1041 529 371 36 22 chr5 163222778 163223414 -39862118 + L2 LINE L2 2616 3261 -52 41 48 0 0 chr5 163223420 163223482 -39862050 + AT_rich Low_complexity Low_complexity 1 62 0 1295 228 153 11 chr5 163224253 163224613 -39860919 + MLT1D LTR MaLR 3 413 -92 359 339 30 112 chr5 163225152 163225553 -39859979 - L2 LINE L2 -2 3270 2903 1816 106 4 8 chr5 163225571 163225827 -39859705 - AluSc SINE Alu -11 298 44 1990 189 50 23 chr5 163226035 163226570 -39858962 + MLT2A2 LTR ERVL 1 554 0 219 336 26 35 chr5 163226572 163226685 -39858847 + MER5A DNA MER1_type 77 188 -1 26 0 0 0 chr5 163226995 163227021 -39858511 + AT_rich Low_complexity Low_complexity 1 26 0 387 240 78 68 chr5 163227730 163228026 -39857506 + L1MCc LINE L1 1225 1523 -4900 954 304 95 42 chr5 163228083 163229240 -39856292 + L1MCc LINE L1 1783 3000 -4122 638 152 76 0 chr5 163229268 163229400 -39856132 + L1MA8 LINE L1 6070 6211 -80 1190 269 120 22 chr5 163229446 163230222 -39855310 + L1MCc LINE L1 2971 3822 -3119 247 278 46 0 chr5 163230238 163230346 -39855186 + L1MCc LINE L1 4135 4247 -2694 2670 245 77 67 chr5 163230424 163231501 -39854031 + L1MCc LINE L1 4528 5592 -1365 198 0 0 0 chr5 163231501 163231523 -39854009 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2670 245 77 67 chr5 163231523 163231847 -39853685 + L1MCc LINE L1 5592 5911 -1046 3719 93 192 2 chr5 163231847 163232425 -39853107 + LTR12 LTR ERV1 1 688 0 2670 245 77 67 chr5 163232425 163232494 -39853038 + L1MCc LINE L1 5911 5978 -979 2087 61 7 4 chr5 163232494 163232772 -39852760 + L1PA4 LINE L1 5876 6154 -1 2670 245 77 67 chr5 163232772 163232997 -39852535 + L1MCc LINE L1 5978 6233 -724 546 304 64 69 chr5 163233112 163233503 -39852029 + L2 LINE L2 2925 3313 0 216 0 0 0 chr5 163234156 163234180 -39851352 + (TG)n Simple_repeat Simple_repeat 2 25 0 1907 167 44 50 chr5 163235109 163235545 -39849987 + Tigger2a DNA MER2_type 1 433 -1 733 55 0 9 chr5 163236063 163236173 -39849359 + L1PA2 LINE L1 942 1050 -5096 33957 24 0 0 chr5 163236173 163240978 -39844554 + L1PA2 LINE L1 1351 6155 0 188 322 0 22 chr5 163241821 163241911 -39843621 - MIR SINE MIR -128 134 47 239 308 26 0 chr5 163242626 163242704 -39842828 + MIR SINE MIR 106 185 -77 639 309 80 23 chr5 163243369 163243631 -39841901 - L2 LINE L2 0 3313 3037 24 32 0 0 chr5 163244913 163244944 -39840588 + AT_rich Low_complexity Low_complexity 1 31 0 186 289 0 84 chr5 163245398 163245481 -39840051 + L2 LINE L2 3219 3294 -19 231 341 77 24 chr5 163245487 163245695 -39839837 + L2 LINE L2 2616 2834 -480 307 276 17 35 chr5 163245781 163245897 -39839635 + MIR SINE MIR 111 224 -38 1066 225 43 38 chr5 163247118 163247513 -39838019 - L1MDa LINE L1 -4881 1659 1263 40 31 0 15 chr5 163247515 163247542 -39837990 + AT_rich Low_complexity Low_complexity 1 27 -37 2953 112 21 64 chr5 163247542 163248071 -39837461 + L1PA10 LINE L1 5657 6162 -6 40 31 0 15 chr5 163248071 163248108 -39837424 + AT_rich Low_complexity Low_complexity 27 64 0 13659 193 64 24 chr5 163248214 163254773 -39830759 - L1PB2 LINE L1 0 6867 1078 231 114 0 0 chr5 163254773 163254808 -39830724 + (TTG)n Simple_repeat Simple_repeat 2 36 0 13659 193 64 24 chr5 163254808 163255806 -39829726 - L1PB2 LINE L1 -5789 1078 121 5159 191 9 8 chr5 163255789 163257219 -39828313 - L1PA16 LINE L1 -8 6158 4730 * 1994 191 80 0 chr5 163257230 163257617 -39827915 + MSTB LTR MaLR 9 426 0 8584 234 37 22 chr5 163257617 163260308 -39825224 - L1PA15-16 LINE L1 -1415 5434 2700 4238 207 9 6 chr5 163260305 163261230 -39824302 - L1PA15-16 LINE L1 -5610 1239 423 * 6285 90 10 13 chr5 163261231 163261917 -39823615 + L1PA8 LINE L1 4681 5368 -804 2258 113 0 0 chr5 163261917 163262210 -39823322 + AluSg SINE Alu 1 293 -17 6285 90 10 13 chr5 163262210 163262240 -39823292 + L1PA8 LINE L1 5368 5397 -775 207 0 0 0 chr5 163262240 163262263 -39823269 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6285 90 10 13 chr5 163262263 163263027 -39822505 + L1PA8 LINE L1 5397 6159 -13 799 89 0 0 chr5 163263218 163263330 -39822202 - L1PA5 LINE L1 -8 6146 6035 255 31 0 0 chr5 163263949 163263981 -39821551 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 782 93 0 0 chr5 163263990 163264097 -39821435 + L1PA8A LINE L1 5643 5749 -382 500 192 0 8 chr5 163264097 163264217 -39821315 + CT-rich Low_complexity Low_complexity 2 120 0 274 311 58 10 chr5 163264689 163264792 -39820740 + L2 LINE L2 3205 3312 -1 308 255 32 11 chr5 163265465 163265559 -39819973 - MLT1K LTR MaLR -1 587 492 748 228 82 0 chr5 163265645 163265816 -39819716 - MER58C DNA MER1_type -30 185 1 1257 210 28 0 chr5 163265970 163266296 -39819236 + L1PA15-16 LINE L1 1 387 -6462 2863 16 0 0 chr5 163266298 163266616 -39818916 - AluYb8 SINE Alu 0 318 1 6386 86 0 12 chr5 163266686 163267764 -39817768 - L1PA8 LINE L1 -9 6163 5084 3127 131 39 55 chr5 163267764 163268398 -39817134 - L1PA8 LINE L1 -2356 3790 3167 6419 64 31 3 chr5 163268408 163269481 -39816051 - L1PA7 LINE L1 -8 6146 5103 665 221 7 0 chr5 163269481 163269617 -39815915 - L1P3 LINE L1 -5737 138 2 455 239 67 67 chr5 163269616 163270021 -39815511 - L1MEd LINE L1 -4807 1503 1058 * 303 363 0 0 chr5 163270588 163270690 -39814842 + Charlie8 DNA MER1_type 175 276 -2141 414 0 0 0 chr5 163271238 163271284 -39814248 + (TG)n Simple_repeat Simple_repeat 1 46 0 1471 266 57 29 chr5 163272035 163272524 -39813008 + MLT1D LTR MaLR 1 503 -2 320 349 8 8 chr5 163272888 163273014 -39812518 - MER5A DNA MER1_type -63 126 1 7429 40 2 0 chr5 163273409 163274514 -39811018 + L1PA5 LINE L1 5047 6153 -1 237 378 159 0 chr5 163275809 163275960 -39809572 + L2 LINE L2 2851 3025 -288 352 339 73 12 chr5 163276879 163277044 -39808488 + MIR3 SINE MIR 33 207 -1 279 376 41 48 chr5 163278326 163278597 -39806935 - L2 LINE L2 -87 3185 2917 669 273 61 15 chr5 163279038 163279236 -39806296 + MIR SINE MIR 56 262 0 24 0 0 0 chr5 163279242 163279266 -39806266 + AT_rich Low_complexity Low_complexity 1 24 0 386 296 61 34 chr5 163279673 163280052 -39805480 - L1ME4a LINE L1 -8 6113 5725 3967 168 15 64 chr5 163280072 163280871 -39804661 + L1MCa LINE L1 24 783 -5643 1598 236 82 11 chr5 163280868 163281477 -39804055 - L1 LINE L1 -2848 3122 2471 * 707 279 85 4 chr5 163281496 163281754 -39803778 - L1 LINE L1 -5610 281 3 388 289 78 56 chr5 163282131 163282311 -39803221 - MIR3 SINE MIR -6 202 19 210 147 0 0 chr5 163282994 163283028 -39802504 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 30 0 0 0 chr5 163283101 163283131 -39802401 + AT_rich Low_complexity Low_complexity 1 30 0 560 291 78 35 chr5 163283137 163283367 -39802165 - MIR SINE MIR -21 241 2 32 67 0 0 chr5 163283895 163283955 -39801577 + AT_rich Low_complexity Low_complexity 1 60 0 30 45 0 0 chr5 163284149 163284193 -39801339 + AT_rich Low_complexity Low_complexity 1 44 0 333 292 5 104 chr5 163284685 163284877 -39800655 + MIR SINE MIR 79 251 -11 918 319 73 28 chr5 163285073 163285537 -39799995 - L2 LINE L2 0 3313 2829 201 39 0 0 chr5 163285723 163285749 -39799783 + (TG)n Simple_repeat Simple_repeat 2 27 0 34 0 0 0 chr5 163285890 163285924 -39799608 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 163286300 163286322 -39799210 + AT_rich Low_complexity Low_complexity 1 22 0 446 351 29 23 chr5 163286322 163286493 -39799039 + MIR3 SINE MIR 16 187 -21 471 388 100 14 chr5 163286561 163287152 -39798380 + L2 LINE L2 2211 2852 -462 414 0 0 0 chr5 163287154 163287200 -39798332 + (TTA)n Simple_repeat Simple_repeat 2 47 0 193 281 0 47 chr5 163287324 163287388 -39798144 + L2 LINE L2 2714 2774 -540 236 229 16 0 chr5 163287943 163288004 -39797528 + MER94 DNA DNA 11 72 -62 561 308 103 41 chr5 163288188 163288374 -39797158 - L2 LINE L2 -5 3308 3135 894 206 67 0 chr5 163288374 163288568 -39796964 + MER3 DNA MER1_type 3 209 0 561 308 103 41 chr5 163288568 163288816 -39796716 - L2 LINE L2 -178 3135 2847 295 342 147 34 chr5 163288810 163288940 -39796592 + L2 LINE L2 2896 3010 -303 * 2622 48 0 0 chr5 163288940 163289250 -39796282 - AluY SINE Alu -1 310 1 295 342 147 34 chr5 163289250 163289473 -39796059 + L2 LINE L2 3010 3289 -24 429 274 38 9 chr5 163289756 163289862 -39795670 - MER81 DNA DNA -5 109 1 192 286 0 0 chr5 163289862 163289911 -39795621 + L2 LINE L2 3251 3299 -14 825 296 26 55 chr5 163290208 163290832 -39794700 + L1MEd LINE L1 544 1149 -4970 1548 174 0 82 chr5 163291531 163291835 -39793697 - AluJo SINE Alu -25 287 9 529 310 7 0 chr5 163292226 163292381 -39793151 + MIR SINE MIR 84 239 -23 180 250 0 0 chr5 163292591 163292627 -39792905 - L2 LINE L2 -2 3311 3276 241 302 16 0 chr5 163292792 163292855 -39792677 - L2 LINE L2 -261 3052 2989 2487 58 0 0 chr5 163293020 163293315 -39792217 - AluY SINE Alu -16 295 1 280 329 103 7 chr5 163293423 163293569 -39791963 - MER117 DNA MER1_type -34 163 4 986 173 0 0 chr5 163293900 163294056 -39791476 + FRAM SINE Alu 1 156 -20 241 399 76 0 chr5 163295271 163295429 -39790103 + MIR3 SINE MIR 22 191 -17 414 351 50 10 chr5 163295502 163295704 -39789828 - MIR SINE MIR -50 212 3 390 294 28 56 chr5 163296369 163296583 -39788949 - MLT1K LTR MaLR 0 588 381 242 56 28 0 chr5 163298591 163298627 -39786905 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 240 35 0 0 chr5 163298640 163298669 -39786863 + (TG)n Simple_repeat Simple_repeat 1 29 0 193 269 13 64 chr5 163298712 163298790 -39786742 + MIR SINE MIR 81 154 -108 285 355 134 12 chr5 163299192 163299364 -39786168 - MIR SINE MIR -11 251 59 216 275 69 92 chr5 163299822 163299953 -39785579 + MIR SINE MIR 123 250 -12 389 357 85 8 chr5 163300929 163301298 -39784234 - LTR16B LTR ERVL -9 441 23 323 284 29 10 chr5 163302231 163302333 -39783199 + MIR3 SINE MIR 83 186 -22 300 336 152 9 chr5 163302556 163302767 -39782765 - MIR SINE MIR -21 241 1 198 362 90 37 chr5 163303405 163303593 -39781939 - L2 LINE L2 -338 2976 2779 508 302 196 23 chr5 163303608 163303751 -39781781 - L2 LINE L2 -10 3303 3186 351 0 0 0 chr5 163303751 163303790 -39781742 + (CA)n Simple_repeat Simple_repeat 2 40 0 508 302 196 23 chr5 163303790 163304237 -39781295 - L2 LINE L2 -127 3186 2626 884 186 208 50 chr5 163304238 163304517 -39781015 - MER33 DNA MER1_type -1 323 1 247 286 31 31 chr5 163304560 163304658 -39780874 - L2 LINE L2 -742 2572 2475 197 254 146 55 chr5 163305473 163305583 -39779949 + MIR SINE MIR 19 138 -70 565 203 72 43 chr5 163306082 163306289 -39779243 + MER106A DNA MER1_type 20 232 -4 336 289 122 37 chr5 163306553 163306823 -39778709 - L2 LINE L2 0 3313 3021 202 329 71 0 chr5 163307024 163307109 -39778423 - L2 LINE L2 0 3313 3223 2645 294 68 19 chr5 163307123 163308054 -39777478 - L2 LINE L2 -951 2363 1388 302 314 12 0 chr5 163308075 163308161 -39777371 + MIR SINE MIR 68 154 -108 329 89 0 127 chr5 163309096 163309216 -39776316 + L1PA10 LINE L1 6099 6208 0 283 338 0 0 chr5 163309311 163309379 -39776153 + L2 LINE L2 3246 3313 0 339 25 0 0 chr5 163310557 163310597 -39774935 + (CA)n Simple_repeat Simple_repeat 2 41 0 204 276 92 46 chr5 163310624 163310711 -39774821 - MER5B DNA MER1_type -74 104 14 23 0 0 0 chr5 163310965 163310988 -39774544 + AT_rich Low_complexity Low_complexity 1 23 0 581 266 18 12 chr5 163311081 163311250 -39774282 + MER117 DNA MER1_type 1 170 -27 1670 159 37 0 chr5 163313307 163313603 -39771929 + MER2 DNA MER2_type 16 322 -23 22 94 0 0 chr5 163314132 163314196 -39771336 + AT_rich Low_complexity Low_complexity 1 64 0 1113 116 12 0 chr5 163314233 163314397 -39771135 - L1PB1 LINE L1 0 6867 6702 9831 194 19 29 chr5 163314407 163316606 -39768926 - L1PB1 LINE L1 -217 6650 4491 2201 99 0 3 chr5 163316606 163316898 -39768634 - AluSg SINE Alu -19 291 1 9831 194 19 29 chr5 163316898 163317891 -39767641 - L1PB1 LINE L1 -2376 4491 3490 1508 169 29 0 chr5 163317883 163318156 -39767376 - L1PB1 LINE L1 -6582 281 1 * 1594 191 29 0 chr5 163320144 163320421 -39765111 + AluJo SINE Alu 1 285 -27 664 321 28 38 chr5 163320431 163320700 -39764832 - MIR SINE MIR 0 262 3 256 349 130 0 chr5 163321791 163321937 -39763595 + MIR SINE MIR 92 256 -6 584 299 6 0 chr5 163321984 163322141 -39763391 + MER58A DNA MER1_type 1 158 0 21 0 0 0 chr5 163322873 163322894 -39762638 + AT_rich Low_complexity Low_complexity 1 21 0 463 279 120 0 chr5 163323073 163323229 -39762303 - MIR SINE MIR -55 207 35 227 276 155 26 chr5 163323227 163323343 -39762189 + L2 LINE L2 3182 3312 -1 * 307 264 136 9 chr5 163323574 163323684 -39761848 - MIR SINE MIR -55 207 84 207 233 9 17 chr5 163323865 163323981 -39761551 + (TA)n Simple_repeat Simple_repeat 2 116 0 1073 279 48 48 chr5 163324012 163324475 -39761057 - L1ME3A LINE L1 -86 6084 5622 27 0 0 0 chr5 163324498 163324525 -39761007 + AT_rich Low_complexity Low_complexity 1 27 0 21 71 0 0 chr5 163325406 163325448 -39760084 + AT_rich Low_complexity Low_complexity 1 42 0 627 202 8 8 chr5 163325456 163325580 -39759952 - AluJb SINE Alu -186 126 3 23 0 0 0 chr5 163326184 163326207 -39759325 + AT_rich Low_complexity Low_complexity 1 23 0 671 305 31 12 chr5 163326292 163326548 -39758984 - MIR SINE MIR 0 262 2 24 0 0 0 chr5 163327450 163327474 -39758058 + AT_rich Low_complexity Low_complexity 1 24 0 1631 201 49 63 chr5 163327652 163327745 -39757787 - L1MC4 LINE L1 -182 7860 7767 2317 79 7 0 chr5 163327745 163328036 -39757496 + AluY SINE Alu 1 293 -18 1631 201 49 63 chr5 163328036 163328430 -39757102 - L1MC4 LINE L1 -275 7767 7380 3050 167 29 22 chr5 163328435 163329083 -39756449 - L1MA8 LINE L1 0 6291 5639 23 33 0 0 chr5 163329108 163329138 -39756394 + AT_rich Low_complexity Low_complexity 1 30 0 2024 162 20 4 chr5 163329253 163329828 -39755704 + L1M2 LINE L1 5033 5618 -673 634 81 0 0 chr5 163329854 163329940 -39755592 + L1P4 LINE L1 5388 5473 -688 9406 157 7 18 chr5 163329941 163331848 -39753684 + L1PA13 LINE L1 3603 5482 -686 1980 128 0 3 chr5 163331848 163332153 -39753379 + AluSg SINE Alu 1 304 0 9406 157 7 18 chr5 163332153 163332560 -39752972 + L1PA13 LINE L1 5482 5892 -276 965 129 0 23 chr5 163332567 163332738 -39752794 + L1PA13 LINE L1 5996 6162 -1 23 0 0 0 chr5 163332933 163332956 -39752576 + AT_rich Low_complexity Low_complexity 1 23 0 693 242 123 9 chr5 163333458 163333669 -39751863 + MIR SINE MIR 1 235 -27 574 332 34 27 chr5 163336925 163337217 -39748315 - L1MEc LINE L1 -5992 404 111 37 0 0 0 chr5 163337217 163337254 -39748278 + AT_rich Low_complexity Low_complexity 1 37 0 2150 112 0 3 chr5 163337256 163337543 -39747989 - AluSx SINE Alu -24 288 3 668 262 33 19 chr5 163338300 163338514 -39747018 + L1ME3A LINE L1 5703 5919 -251 748 85 0 0 chr5 163338517 163338623 -39746909 + MLT2A1 LTR ERVL 1 106 -338 282 276 135 32 chr5 163339060 163339216 -39746316 - MLT2E LTR ERVL -3 625 454 352 331 28 21 chr5 163339303 163339448 -39746084 - MLT2E LTR ERVL -453 175 30 2016 155 87 129 chr5 163339461 163340004 -39745528 + MLT2B1 LTR ERVL 1 520 0 499 226 57 38 chr5 163340398 163340557 -39744975 - ERVL-E LTR ERVL -333 5431 5270 257 161 4 0 chr5 163340669 163340724 -39744808 - MLT1E1 LTR MaLR 0 654 450 937 229 91 62 chr5 163340854 163340895 -39744637 - MLT2C2 LTR ERVL 0 464 426 261 0 0 0 chr5 163340895 163340924 -39744608 + (TATG)n Simple_repeat Simple_repeat 2 30 0 937 229 91 62 chr5 163340924 163341254 -39744278 - MLT2C2 LTR ERVL -38 426 82 216 274 60 12 chr5 163341293 163341377 -39744155 - MIR SINE MIR -76 186 99 186 357 87 22 chr5 163341455 163341640 -39743892 - MIR SINE MIR -7 255 59 1554 126 156 4 chr5 163342134 163342397 -39743135 - AluSx SINE Alu -9 303 1 416 323 49 23 chr5 163343193 163343463 -39742069 + MLT1L LTR MaLR 227 604 -11 399 242 24 16 chr5 163343536 163343660 -39741872 - MIR SINE MIR -25 237 113 391 338 0 15 chr5 163343787 163343923 -39741609 + MIR SINE MIR 2 135 -127 376 313 124 73 chr5 163344031 163344264 -39741268 - MIR SINE MIR -9 253 9 2277 119 6 0 chr5 163344370 163344681 -39740851 - AluSq SINE Alu 0 313 1 21 36 0 0 chr5 163346062 163346090 -39739442 + AT_rich Low_complexity Low_complexity 1 28 0 700 148 17 0 chr5 163346102 163346231 -39739301 + MER30B DNA MER1_type 4 108 -82 33741 36 3 1 chr5 163346243 163351154 -39734378 - L1PA4 LINE L1 -3 6152 1239 690 110 0 0 chr5 163351157 163351248 -39734284 + MER30B DNA MER1_type 140 230 0 208 251 24 132 chr5 163351450 163351513 -39734019 - L2 LINE L2 -4 3309 3241 1606 101 64 107 chr5 163351513 163351811 -39733721 + AluSx SINE Alu 1 285 -27 208 251 24 132 chr5 163351811 163351914 -39733618 - L2 LINE L2 -72 3241 3161 207 189 0 0 chr5 163352076 163352113 -39733419 + GA-rich Low_complexity Low_complexity 2 38 0 430 328 75 6 chr5 163352163 163352337 -39733195 - L2 LINE L2 -451 2863 2678 21 0 0 0 chr5 163352406 163352427 -39733105 + AT_rich Low_complexity Low_complexity 1 21 0 1201 243 0 0 chr5 163352428 163352708 -39732824 - L1PB4 LINE L1 -4 6152 5873 670 346 60 7 chr5 163352778 163353061 -39732471 + L3 LINE CR1 1273 1570 -7 357 339 8 0 chr5 163354969 163355093 -39730439 - MLT1I LTR MaLR -232 177 53 303 356 84 5 chr5 163355061 163355252 -39730280 - MLT1I LTR MaLR -203 206 1 * 334 291 27 0 chr5 163355343 163355453 -39730079 + MLT1L LTR MaLR 503 615 0 214 351 9 18 chr5 163355464 163355575 -39729957 - L2 LINE L2 -15 3298 3189 884 142 28 7 chr5 163356225 163356366 -39729166 - MSTB LTR MaLR 0 426 283 744 198 32 13 chr5 163356369 163356526 -39729006 + MSTA LTR MaLR 133 292 -136 501 276 40 0 chr5 163356844 163356996 -39728536 + MER117 DNA MER1_type 4 161 -36 1888 105 22 18 chr5 163357605 163357882 -39727650 + AluSq SINE Alu 1 278 -35 186 43 0 0 chr5 163357897 163357920 -39727612 + (TAA)n Simple_repeat Simple_repeat 2 24 0 257 0 0 29 chr5 163357958 163357992 -39727540 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 2348 181 56 26 chr5 163358018 163358482 -39727050 - MLT2B1 LTR ERVL -42 478 1 255 306 63 68 chr5 163358506 163358728 -39726804 - MIR SINE MIR -1 261 41 2271 108 3 0 chr5 163359433 163359738 -39725794 + AluSp SINE Alu 5 310 -3 22 0 0 0 chr5 163359901 163359923 -39725609 + AT_rich Low_complexity Low_complexity 1 22 0 296 331 52 68 chr5 163360176 163360427 -39725105 + MLT1K LTR MaLR 177 423 -165 369 323 132 11 chr5 163361411 163361600 -39723932 + MIR SINE MIR 1 212 -50 184 377 14 0 chr5 163361747 163361816 -39723716 + MIR SINE MIR 4 73 -189 29 47 0 0 chr5 163361817 163361860 -39723672 + AT_rich Low_complexity Low_complexity 1 43 0 281 125 18 0 chr5 163362101 163362157 -39723375 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 658 277 65 87 chr5 163362276 163362817 -39722715 - L1ME3A LINE L1 -304 5866 5338 241 273 53 0 chr5 163363233 163363365 -39722167 - L1ME3A LINE L1 -3210 2936 2798 367 330 89 10 chr5 163363735 163363938 -39721594 - LTR16A LTR ERVL -76 374 156 1438 346 90 43 chr5 163364174 163365054 -39720478 - ERVL LTR ERVL -381 5383 4546 1787 127 9 79 chr5 163365054 163365370 -39720162 - AluSx SINE Alu -18 294 1 1438 346 90 43 chr5 163365370 163365961 -39719571 - ERVL LTR ERVL -1218 4546 3984 714 82 0 0 chr5 163365961 163366059 -39719473 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 1438 346 90 43 chr5 163366059 163366765 -39718767 - ERVL LTR ERVL -1780 3984 3103 1009 159 12 6 chr5 163366870 163367033 -39718499 + MSTB1 LTR MaLR 1 164 -268 2832 230 50 26 chr5 163367327 163367517 -39718015 - L1MD2 LINE L1 -14 6625 6441 342 0 0 0 chr5 163367517 163367555 -39717977 + (TG)n Simple_repeat Simple_repeat 2 39 0 2832 230 50 26 chr5 163367555 163368176 -39717356 - L1MD2 LINE L1 -198 6441 5794 389 213 0 0 chr5 163368179 163368273 -39717259 - L1MA5 LINE L1 0 6300 6207 695 203 90 9 chr5 163368275 163368487 -39717045 - L1MD2 LINE L1 -731 5791 5563 4921 188 34 14 chr5 163368494 163369589 -39715943 - L1MC1 LINE L1 -2 6331 5209 3276 126 69 129 chr5 163369594 163370056 -39715476 - LTR12 LTR ERV1 0 2428 1940 315 0 0 0 chr5 163370056 163370091 -39715441 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3276 126 69 129 chr5 163370091 163370105 -39715427 - LTR12 LTR ERV1 -488 1940 1927 2950 41 19 0 chr5 163370105 163370468 -39715064 - L1PA4 LINE L1 -3 6152 5783 3276 126 69 129 chr5 163370468 163370879 -39714653 - LTR12 LTR ERV1 -501 1927 57 264 231 0 0 chr5 163370879 163370931 -39714601 - LTR30 LTR ERV1 -670 52 1 25380 84 15 8 chr5 163370931 163374433 -39711099 - HERV9 LTR ERV1 0 8399 4872 2757 234 66 55 chr5 163374436 163375164 -39710368 - L1MC1 LINE L1 -942 5204 4458 2138 139 0 0 chr5 163375164 163375466 -39710066 - AluSx SINE Alu -10 302 1 2757 234 66 55 chr5 163375466 163375876 -39709656 - L1MC1 LINE L1 -1688 4458 4054 3134 245 40 78 chr5 163375888 163377478 -39708054 - L1MD2 LINE L1 -860 5566 4038 414 146 22 0 chr5 163377503 163377592 -39707940 - L1MA9 LINE L1 0 6312 6222 269 23 136 0 chr5 163377760 163377804 -39707728 + AluSp/q SINE Alu 248 297 -6 2061 144 3 19 chr5 163377804 163378172 -39707360 + L1MB8 LINE L1 5814 6175 -3 533 162 0 0 chr5 163378323 163378422 -39707110 - FLAM_A SINE Alu -3 139 41 237 363 0 0 chr5 163378555 163378635 -39706897 - MIR SINE MIR 0 262 183 381 289 128 56 chr5 163378730 163378849 -39706683 + MIR SINE MIR 13 151 -111 830 150 0 0 chr5 163378849 163378982 -39706550 + FLAM_C SINE Alu 1 133 0 381 289 128 56 chr5 163378982 163379042 -39706490 + MIR SINE MIR 151 205 -57 186 43 0 0 chr5 163379227 163379250 -39706282 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 356 299 21 0 chr5 163379334 163379431 -39706101 - MIR SINE MIR -93 115 17 2248 97 17 0 chr5 163380573 163380871 -39704661 - AluSx SINE Alu -9 303 1 593 226 66 6 chr5 163380891 163381067 -39704465 - MIR SINE MIR -41 221 34 758 279 78 23 chr5 163381112 163381331 -39704201 - MIR SINE MIR -26 236 6 1742 127 57 23 chr5 163381439 163381739 -39703793 - AluSx SINE Alu -2 310 1 638 203 36 7 chr5 163382313 163382451 -39703081 + MIR3 SINE MIR 66 207 -1 2735 220 62 39 chr5 163383703 163384685 -39700847 - L1MD2 LINE L1 -3873 2734 1695 198 0 0 0 chr5 163384685 163384707 -39700825 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 212 255 0 0 chr5 163384752 163384799 -39700733 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 184 259 112 35 chr5 163386440 163386556 -39698976 + MIR SINE MIR 120 244 -18 1593 178 14 28 chr5 163386673 163386985 -39698547 + AluJo SINE Alu 1 308 0 1298 167 40 4 chr5 163389671 163389898 -39695634 + AluJb SINE Alu 69 303 -9 472 342 98 22 chr5 163389901 163390126 -39695406 + MIR SINE MIR 20 261 -1 283 330 51 8 chr5 163390154 163390272 -39695260 - L2 LINE L2 0 3272 3150 184 341 95 85 chr5 163390376 163390786 -39694746 - L2 LINE L2 -2691 623 210 23 0 0 0 chr5 163391246 163391269 -39694263 + AT_rich Low_complexity Low_complexity 1 23 0 1268 204 7 42 chr5 163391277 163391562 -39693970 + AluJo SINE Alu 29 303 -9 382 256 105 0 chr5 163392907 163393040 -39692492 + MER103 DNA DNA 8 154 -12 540 233 89 6 chr5 163393396 163393576 -39691956 - L1MD2 LINE L1 -14 6345 6151 297 0 0 0 chr5 163393577 163393610 -39691922 + (TG)n Simple_repeat Simple_repeat 2 34 0 2096 276 98 27 chr5 163393879 163394945 -39690587 - L2 LINE L2 -8 3305 2149 655 273 18 6 chr5 163394942 163395107 -39690425 - MIR SINE MIR -20 242 76 * 599 328 70 38 chr5 163395519 163395964 -39689568 - L2 LINE L2 -2 3311 2853 1248 332 63 42 chr5 163396718 163397810 -39687722 - L2 LINE L2 -1 3312 2203 239 357 29 36 chr5 163397813 163397953 -39687579 - MLT1K LTR MaLR -236 352 214 740 236 28 0 chr5 163398165 163398347 -39687185 - MER5A DNA MER1_type -1 188 2 2098 146 19 32 chr5 163398376 163398745 -39686787 - THE1B LTR MaLR 0 364 1 261 222 127 0 chr5 163399204 163399267 -39686265 - L2 LINE L2 -1 3271 3201 198 0 0 0 chr5 163400498 163400520 -39685012 + (T)n Simple_repeat Simple_repeat 1 22 0 261 324 21 35 chr5 163400805 163400947 -39684585 + MIR SINE MIR 69 208 -54 7220 36 2 7 chr5 163401006 163402020 -39683512 + L1PA4 LINE L1 5150 6159 0 699 325 70 18 chr5 163402183 163402571 -39682961 + LTR33 LTR ERVL 22 429 -92 557 316 51 70 chr5 163403101 163404114 -39681418 + L1ME3A LINE L1 4913 5905 -284 183 376 26 34 chr5 163404620 163404737 -39680795 + MIR SINE MIR 46 161 -101 360 306 121 34 chr5 163404905 163405111 -39680421 - MIR SINE MIR -27 235 12 1823 78 0 0 chr5 163405247 163405489 -39680043 - L1PA8 LINE L1 -2 6170 5929 15348 33 10 0 chr5 163405596 163408226 -39677306 + L1PA3 LINE L1 3493 6155 0 268 333 40 40 chr5 163409672 163409798 -39675734 - L2 LINE L2 -20 3293 3168 16150 171 26 23 chr5 163410006 163410196 -39675336 + L1M1 LINE L1 15 203 -7362 2185 132 3 0 chr5 163410196 163410507 -39675025 + AluSx SINE Alu 1 312 0 16150 171 26 23 chr5 163410507 163412745 -39672787 + L1M1 LINE L1 203 2457 -5108 11163 23 8 0 chr5 163412745 163414811 -39670721 + L1PA2 LINE L1 4083 6155 0 16150 171 26 23 chr5 163414811 163415386 -39670146 + L1M1 LINE L1 2457 3029 -4536 4306 42 7 0 chr5 163415378 163415919 -39669613 + L1PA4 LINE L1 4803 5347 -799 * 4719 39 5 0 chr5 163415931 163416499 -39669033 + L1PA4 LINE L1 5574 6144 -11 3433 164 41 26 chr5 163416510 163417632 -39667900 + L1M1 LINE L1 3002 4136 -3429 * 5125 109 74 9 chr5 163417608 163418462 -39667070 + L1MA1 LINE L1 6813 7721 0 21 0 0 0 chr5 163418462 163418483 -39667049 + AT_rich Low_complexity Low_complexity 1 21 0 2236 119 0 0 chr5 163418895 163419197 -39666335 - AluSq SINE Alu -11 302 1 2222 110 0 0 chr5 163419395 163419687 -39665845 - AluSc SINE Alu -17 292 1 401 215 32 55 chr5 163420679 163420827 -39664705 - L1ME4a LINE L1 -294 5827 5682 198 308 33 11 chr5 163420989 163421080 -39664452 - L2 LINE L2 0 3313 3221 23 54 0 0 chr5 163421742 163421779 -39663753 + AT_rich Low_complexity Low_complexity 1 37 0 32 0 0 0 chr5 163421866 163421898 -39663634 + AT_rich Low_complexity Low_complexity 1 32 0 997 340 48 35 chr5 163422040 163422519 -39663013 - MLT1K LTR MaLR -94 494 10 437 354 50 0 chr5 163422539 163422720 -39662812 - MIR SINE MIR -71 191 2 218 337 41 41 chr5 163422979 163423077 -39662455 + L2 LINE L2 3150 3247 -25 492 324 66 19 chr5 163423168 163423381 -39662151 + MIR SINE MIR 40 262 0 242 227 4 27 chr5 163423893 163423967 -39661565 - MLT1K LTR MaLR 0 615 517 814 332 57 18 chr5 163424073 163424459 -39661073 - MLT1K LTR MaLR -160 428 28 1233 181 168 9 chr5 163424596 163424911 -39660621 - MER47A DNA MER2_type -1 365 1 328 324 35 45 chr5 163426106 163426314 -39659218 + MIR SINE MIR 13 216 -46 284 246 14 0 chr5 163426922 163426991 -39658541 - MLT1K LTR MaLR -3 585 516 29259 123 13 17 chr5 163427421 163429103 -39656429 + L1PA7 LINE L1 740 2426 -4043 3434 70 15 2 chr5 163429103 163429560 -39655972 + L1PA7 LINE L1 5691 6154 0 29259 123 13 17 chr5 163429560 163433541 -39651991 + L1PA7 LINE L1 2426 6469 0 261 0 0 0 chr5 163433557 163433586 -39651946 + (CA)n Simple_repeat Simple_repeat 2 30 0 964 67 0 0 chr5 163434230 163434350 -39651182 + AluY SINE Alu 178 297 -14 4790 161 44 7 chr5 163434351 163435241 -39650291 + L1MA8 LINE L1 5359 6281 -10 311 281 238 52 chr5 163435499 163435709 -39649823 + MIR SINE MIR 14 262 0 241 149 0 21 chr5 163436894 163436941 -39648591 - MIR SINE MIR -40 222 177 * 1001 304 124 22 chr5 163436939 163437674 -39647858 - L2 LINE L2 0 3313 2503 329 211 44 18 chr5 163437756 163437870 -39647662 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 465 333 85 0 chr5 163439239 163439428 -39646104 + MIR SINE MIR 3 207 -55 377 330 62 22 chr5 163440740 163440967 -39644565 - MIR SINE MIR -2 260 25 188 284 99 12 chr5 163441117 163441198 -39644334 + MIR3 SINE MIR 115 202 -6 417 315 96 15 chr5 163441312 163441509 -39644023 - MIR SINE MIR -38 224 12 256 331 30 53 chr5 163442062 163442195 -39643337 - L3 LINE CR1 -118 1459 1330 271 357 107 0 chr5 163442361 163442473 -39643059 + L2 LINE L2 3137 3260 -12 262 337 0 0 chr5 163443292 163443375 -39642157 - L2 LINE L2 -1 3312 3230 22 56 0 0 chr5 163444621 163444657 -39640875 + AT_rich Low_complexity Low_complexity 1 36 0 13423 158 29 12 chr5 163444664 163445122 -39640410 + Tigger1 DNA MER2_type 2 451 -1967 5015 144 49 6 chr5 163445122 163446300 -39639232 + L1PA15 LINE L1 4966 6152 -13 13423 158 29 12 chr5 163446300 163448218 -39637314 + Tigger1 DNA MER2_type 451 2418 0 1021 226 0 23 chr5 163448900 163449117 -39636415 + L1MA9 LINE L1 1 212 -6818 2216 252 90 51 chr5 163449160 163450202 -39635330 + L1MA9 LINE L1 1214 2214 -4892 1236 251 3 30 chr5 163450202 163450497 -39635035 + AluJo SINE Alu 1 287 -15 2216 252 90 51 chr5 163450497 163452213 -39633319 + L1MA9 LINE L1 2214 3730 -3376 2315 67 0 7 chr5 163452213 163452510 -39633022 + AluY SINE Alu 1 295 -16 2216 252 90 51 chr5 163452510 163452626 -39632906 + L1MA9 LINE L1 3730 3840 -3266 * 12109 35 1 5 chr5 163452623 163454129 -39631403 - L1PA3 LINE L1 -2122 4024 2526 11176 26 6 2 chr5 163454129 163456240 -39629292 + L1PA3 LINE L1 4037 6154 -1 9552 202 60 6 chr5 163456241 163457709 -39627823 + L1MA9 LINE L1 3831 5218 -2054 2050 134 0 19 chr5 163457709 163458023 -39627509 + AluSg SINE Alu 1 308 -2 9552 202 60 6 chr5 163458023 163459793 -39625739 + L1MA9 LINE L1 5218 7250 -22 7645 219 23 11 chr5 163459788 163461726 -39623806 + L1PB4 LINE L1 3276 5236 -910 * 665 79 0 0 chr5 163461726 163461815 -39623717 - L1PA8 LINE L1 -315 5857 5769 3848 159 127 8 chr5 163461840 163462678 -39622854 + L1PB4 LINE L1 5208 6145 -11 479 288 101 53 chr5 163462699 163463133 -39622399 - L1M4 LINE L1 -1077 5069 4615 234 229 53 76 chr5 163463187 163463318 -39622214 - L1M4 LINE L1 -2214 3932 3805 422 126 52 0 chr5 163463712 163463847 -39621685 + (TA)n Simple_repeat Simple_repeat 1 142 0 624 282 0 7 chr5 163463851 163464000 -39621532 + MER63A DNA MER1_type 34 181 -29 388 287 37 83 chr5 163464066 163464414 -39621118 - L1M4 LINE L1 -2911 3235 2904 186 118 0 0 chr5 163464523 163464557 -39620975 + (TC)n Simple_repeat Simple_repeat 1 34 0 204 356 8 25 chr5 163464772 163464890 -39620642 + L2 LINE L2 3003 3118 -195 259 222 49 37 chr5 163465695 163465776 -39619756 + MIR SINE MIR 181 262 0 368 311 31 25 chr5 163467248 163467409 -39618123 - MER5B DNA MER1_type -13 165 4 478 240 23 31 chr5 163468089 163468218 -39617314 - L2 LINE L2 -4 3309 3182 344 336 15 23 chr5 163468451 163468582 -39616950 + MIR3 SINE MIR 31 160 -48 704 250 21 21 chr5 163468583 163468771 -39616761 + MER5A DNA MER1_type 2 189 0 608 259 0 0 chr5 163469783 163469914 -39615618 + MIR SINE MIR 58 188 -74 350 259 133 30 chr5 163470117 163470252 -39615280 - MLT1K LTR MaLR -8 580 432 339 296 97 35 chr5 163470451 163470677 -39614855 - MLT1K LTR MaLR -303 285 46 409 374 55 16 chr5 163470793 163470975 -39614557 + MER5A DNA MER1_type 1 189 0 384 257 151 7 chr5 163471257 163471409 -39614123 + MIR SINE MIR 86 259 -3 * 462 298 33 13 chr5 163471398 163471549 -39613983 - MIR SINE MIR -34 228 75 456 19 0 0 chr5 163472627 163472680 -39612852 + (CA)n Simple_repeat Simple_repeat 2 54 0 298 262 73 63 chr5 163472786 163472992 -39612540 - MLT1K LTR MaLR -8 580 373 502 148 10 30 chr5 163473888 163473989 -39611543 + MER53 DNA DNA 3 101 -88 629 309 33 14 chr5 163474093 163474303 -39611229 + MIR SINE MIR 35 248 -14 231 349 0 0 chr5 163474702 163474768 -39610764 + L2 LINE L2 3198 3263 -9 276 200 0 0 chr5 163474958 163475008 -39610524 + MER94 DNA DNA 85 134 0 232 316 41 10 chr5 163475235 163475333 -39610199 - MIR3 SINE MIR -2 206 106 804 251 14 29 chr5 163475410 163475617 -39609915 + MER58A DNA MER1_type 11 214 -10 449 259 184 22 chr5 163475872 163476057 -39609475 - MIR SINE MIR -47 215 1 302 391 99 12 chr5 163477122 163477365 -39608167 - L1MEc LINE L1 -5963 433 170 2648 161 12 10 chr5 163477383 163477868 -39607664 - L1MA4 LINE L1 -12 6288 5803 596 213 40 20 chr5 163477892 163478042 -39607490 - L1 LINE L1 -2177 3969 3817 526 215 0 8 chr5 163478037 163478158 -39607374 - L1MA4 LINE L1 -1210 4936 4817 * 2773 238 36 11 chr5 163478126 163478913 -39606619 - L1 LINE L1 -2983 3163 2358 891 208 20 8 chr5 163478910 163479155 -39606377 + L1 LINE L1 3167 3414 -2732 * 23 0 0 0 chr5 163479477 163479500 -39606032 + AT_rich Low_complexity Low_complexity 1 23 0 769 296 52 50 chr5 163479650 163480093 -39605439 - MLT1J1 LTR MaLR 0 446 3 643 285 167 14 chr5 163480250 163480674 -39604858 - L2 LINE L2 -208 3105 2621 1407 256 96 10 chr5 163480737 163481184 -39604348 - L1ME1 LINE L1 -7 6159 5665 378 0 0 0 chr5 163481184 163481226 -39604306 + (TG)n Simple_repeat Simple_repeat 1 42 0 1407 256 96 10 chr5 163481226 163481267 -39604265 - L1ME1 LINE L1 -501 5665 5629 866 195 77 85 chr5 163481277 163481577 -39603955 - AluJo SINE Alu 0 336 39 219 350 0 0 chr5 163481670 163481730 -39603802 - L2 LINE L2 -50 3263 3204 438 346 191 3 chr5 163481748 163482072 -39603460 - L2 LINE L2 -31 3282 2898 393 330 77 95 chr5 163483285 163483715 -39601817 + HAL1 LINE L1 67 488 -2019 496 309 94 25 chr5 163484244 163484519 -39601013 + MLT1K LTR MaLR 182 475 -113 1510 260 161 2 chr5 163484873 163485438 -39600094 + L2 LINE L2 1831 2485 -829 631 272 31 16 chr5 163485416 163485607 -39599925 + L2 LINE L2 2889 3082 -231 * 627 304 19 19 chr5 163485581 163485788 -39599744 + MIR SINE MIR 10 216 -46 * 1140 229 4 11 chr5 163486551 163486818 -39598714 + AluJo SINE Alu 39 303 -9 34 79 0 0 chr5 163486854 163486930 -39598602 + AT_rich Low_complexity Low_complexity 1 76 0 4851 307 62 21 chr5 163487263 163489531 -39596001 + L1M3d LINE L1 301 2020 -1073 3840 232 56 18 chr5 163489544 163491010 -39594522 + L1 LINE L1 3455 5076 -1656 1308 225 94 9 chr5 163491017 163491337 -39594195 - MER7A DNA MER2_type -1 345 1 292 143 36 0 chr5 163491337 163491393 -39594139 + L1 LINE L1 4500 4557 -1589 324 369 22 1 chr5 163491406 163491552 -39593980 - MIR SINE MIR -69 139 7 447 310 14 14 chr5 163493728 163493873 -39591659 - L2 LINE L2 -1 3312 3168 4568 51 7 2 chr5 163494512 163495081 -39590451 - L1PA5 LINE L1 -4 6150 5579 2516 111 0 17 chr5 163496156 163496516 -39589016 + THE1A LTR MaLR 1 354 -1 11063 108 5 0 chr5 163496518 163498089 -39587443 + THE1A-int LTR MaLR 2 1580 0 2646 88 8 3 chr5 163498089 163498442 -39587090 + THE1A LTR MaLR 1 355 0 220 265 15 59 chr5 163499185 163499253 -39586279 - L2 LINE L2 -10 3262 3198 450 290 42 55 chr5 163500041 163500258 -39585274 + MIR SINE MIR 1 214 -48 30 0 0 0 chr5 163500722 163500752 -39584780 + AT_rich Low_complexity Low_complexity 1 30 0 232 235 151 50 chr5 163501520 163501639 -39583893 - LTR16A1 LTR ERVL -311 146 16 708 309 10 0 chr5 163501802 163502009 -39583523 + MER63A DNA MER1_type 2 210 0 5885 206 56 43 chr5 163502213 163502644 -39582888 + L1MB1 LINE L1 3521 3945 -2223 2790 126 16 26 chr5 163502644 163503138 -39582394 + L1MA4A LINE L1 5804 6292 -11 5885 206 56 43 chr5 163503138 163505316 -39580216 + L1MB1 LINE L1 3945 6167 -1 212 279 154 73 chr5 163505717 163505853 -39579679 - MIR SINE MIR 0 262 116 280 213 25 12 chr5 163506316 163506396 -39579136 - LTR67 LTR ERVL 0 557 477 946 215 28 19 chr5 163506530 163506744 -39578788 - MLT1C LTR MaLR 0 467 252 1148 176 42 82 chr5 163506747 163507053 -39578479 - MLT1C LTR MaLR -173 294 1 180 0 0 0 chr5 163507059 163507079 -39578453 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1741 175 3 0 chr5 163507084 163507369 -39578163 + AluJb SINE Alu 1 286 -26 186 43 0 0 chr5 163507372 163507395 -39578137 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9746 99 1 3 chr5 163507498 163508908 -39576624 - L1PA6 LINE L1 -2223 3923 2517 9999 99 2 0 chr5 163508908 163511107 -39574425 + L1PA6 LINE L1 3935 6141 -13 623 232 75 75 chr5 163511121 163511483 -39574049 + L1M4 LINE L1 4416 4777 -1369 * 2679 219 11 6 chr5 163511481 163512112 -39573420 - L1 LINE L1 -873 5273 4640 4897 153 35 7 chr5 163512135 163513011 -39572521 + L1PB4 LINE L1 5254 6154 -2 2764 271 94 28 chr5 163513107 163513829 -39571703 - L1ME1 LINE L1 -5 6230 5557 186 43 0 0 chr5 163513829 163513852 -39571680 + (TC)n Simple_repeat Simple_repeat 2 24 0 2059 119 0 0 chr5 163513858 163514135 -39571397 - AluSx SINE Alu -35 277 1 2764 271 94 28 chr5 163514135 163515567 -39569965 - L1ME1 LINE L1 -682 5553 3703 207 69 0 0 chr5 163515567 163515596 -39569936 + (TG)n Simple_repeat Simple_repeat 1 29 0 2764 271 94 28 chr5 163515596 163516387 -39569145 - L1ME1 LINE L1 -2532 3703 2965 7967 36 1 0 chr5 163516396 163518136 -39567396 - L1PA3 LINE L1 0 6155 4415 9290 36 0 0 chr5 163518136 163519260 -39566272 + L1PA3 LINE L1 3289 4412 -1734 1764 269 58 45 chr5 163519256 163519493 -39566039 - L1ME1 LINE L1 -3217 2998 2766 * 767 273 23 5 chr5 163519493 163519709 -39565823 - MER58A DNA MER1_type -1 223 4 1764 269 58 45 chr5 163519709 163520867 -39564665 - L1ME1 LINE L1 -3449 2766 1626 1419 246 135 42 chr5 163520868 163521566 -39563966 - L1ME3 LINE L1 0 6162 5400 1200 248 11 14 chr5 163521739 163522021 -39563511 - L1PA16 LINE L1 -2 6164 5884 3729 156 6 24 chr5 163522054 163522878 -39562654 - L1PA16 LINE L1 -262 5904 5096 1407 219 94 6 chr5 163524471 163524799 -39560733 + MLT1A1 LTR MaLR 1 357 -8 3451 204 6 16 chr5 163524799 163525465 -39560067 + MLT1A1-int LTR MaLR 4 662 -1073 284 183 56 42 chr5 163525516 163525587 -39559945 + MLT1A1-int LTR MaLR 819 890 -481 497 211 10 0 chr5 163525641 163525745 -39559787 + MLT1A1-int LTR MaLR 679 783 -952 2120 244 67 28 chr5 163525776 163526357 -39559175 + MLT1A1-int LTR MaLR 1131 1734 -1 796 240 37 23 chr5 163526361 163526578 -39558954 + MLT1A1 LTR MaLR 4 223 -142 1530 219 99 2 chr5 163526586 163527052 -39558480 - MLT2B3 LTR ERVL -8 507 1 454 195 71 9 chr5 163527056 163527169 -39558363 + MLT1A1 LTR MaLR 239 358 -16 266 67 156 0 chr5 163527176 163527221 -39558311 + MLT1A1 LTR MaLR 321 372 -2 304 270 9 9 chr5 163527629 163527744 -39557788 - L1M3d LINE L1 -4753 1138 1024 1752 223 54 30 chr5 163527945 163528354 -39557178 - L1 LINE L1 -1225 4921 4496 2009 139 0 0 chr5 163528354 163528635 -39556897 - AluSx SINE Alu -31 281 1 1752 223 54 30 chr5 163528635 163528723 -39556809 - L1 LINE L1 -1650 4496 4412 * 1961 186 56 39 chr5 163528718 163529764 -39555768 + L1MA9 LINE L1 5151 6200 -112 180 0 0 0 chr5 163529764 163529784 -39555748 + (CA)n Simple_repeat Simple_repeat 1 20 0 1961 186 56 39 chr5 163529784 163529898 -39555634 + L1MA9 LINE L1 6200 6311 -1 1119 333 89 8 chr5 163529947 163530681 -39554851 + L2 LINE L2 2519 3309 -4 292 299 43 51 chr5 163531560 163531677 -39553855 - L3 LINE CR1 -441 1136 1021 655 275 96 6 chr5 163531703 163531870 -39553662 - MIR3 SINE MIR -11 197 16 288 337 33 54 chr5 163531908 163532092 -39553440 - MER5A DNA MER1_type -3 186 7 209 294 35 35 chr5 163532191 163532276 -39553256 + MIR SINE MIR 63 147 -115 264 330 35 10 chr5 163533207 163533335 -39552197 + MIR SINE MIR 22 149 -63 31 44 0 0 chr5 163533369 163533414 -39552118 + AT_rich Low_complexity Low_complexity 1 45 0 210 71 0 0 chr5 163533463 163533491 -39552041 + (CAT)n Simple_repeat Simple_repeat 3 30 0 4388 169 31 4 chr5 163534387 163535231 -39550301 + L1MA8 LINE L1 5423 6289 -2 383 259 119 54 chr5 163535298 163535592 -39549940 - L1ME4a LINE L1 -210 5911 5599 702 351 137 21 chr5 163536533 163537111 -39548421 + L2 LINE L2 2113 2757 -557 225 296 11 34 chr5 163537173 163537261 -39548271 + L2 LINE L2 2867 2952 -320 1962 116 31 7 chr5 163537364 163537657 -39547875 - AluSx SINE Alu -12 300 1 22 35 0 0 chr5 163537767 163537796 -39547736 + AT_rich Low_complexity Low_complexity 1 29 0 1576 178 31 96 chr5 163537827 163538244 -39547288 - MLT1B LTR MaLR 0 390 1 186 286 121 11 chr5 163538244 163538326 -39547206 + L2 LINE L2 3213 3307 -6 539 258 128 52 chr5 163538710 163539259 -39546273 + MLT1G LTR MaLR 6 549 -6 1067 206 75 35 chr5 163540455 163540737 -39544795 + MER63C DNA MER1_type 254 546 -384 21 0 0 0 chr5 163541828 163541849 -39543683 + AT_rich Low_complexity Low_complexity 1 21 0 199 319 88 50 chr5 163544415 163544575 -39540957 + L3 LINE CR1 596 761 -816 209 353 10 39 chr5 163544886 163544988 -39540544 - L2 LINE L2 -18 3295 3197 319 319 62 14 chr5 163545056 163545200 -39540332 + MIR SINE MIR 55 205 -57 486 290 75 40 chr5 163545577 163545829 -39539703 + MIR SINE MIR 2 262 0 362 251 58 48 chr5 163545831 163546038 -39539494 - L1M4 LINE L1 -3279 2867 2659 345 250 74 20 chr5 163546424 163546572 -39538960 + L2 LINE L2 3117 3272 -41 548 320 20 10 chr5 163546609 163546806 -39538726 + MIR SINE MIR 40 238 -24 * 616 308 32 103 chr5 163546793 163547261 -39538271 - L2 LINE L2 -35 3278 2844 191 255 21 0 chr5 163547317 163547364 -39538168 + MIR SINE MIR 210 257 -5 326 311 72 40 chr5 163548072 163548323 -39537209 + MLT1K LTR MaLR 321 579 -9 1288 195 135 31 chr5 163548659 163549206 -39536326 - MER67C LTR ERV1 0 514 1 554 335 98 10 chr5 163549791 163550179 -39535353 - L1MC/D LINE L1 -2038 5770 5349 1621 195 0 3 chr5 163550248 163550535 -39534997 - AluJo SINE Alu -26 286 1 182 91 30 0 chr5 163551119 163551152 -39534380 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 237 336 110 27 chr5 163552037 163552183 -39533349 - MIR3 SINE MIR -6 202 45 335 318 73 63 chr5 163552205 163552507 -39533025 - MER102b DNA MER1_type -16 325 21 3622 108 114 53 chr5 163552870 163553162 -39532370 + MER4E LTR ERV1 1 274 -492 1958 122 0 0 chr5 163553162 163553425 -39532107 - AluSp SINE Alu -7 306 44 3622 108 114 53 chr5 163553425 163553852 -39531680 + MER4E LTR ERV1 274 764 -2 283 239 31 85 chr5 163553925 163554055 -39531477 + MLT1H LTR MaLR 411 533 -16 239 293 124 0 chr5 163554065 163554151 -39531381 - MIR SINE MIR -103 105 11 221 214 0 0 chr5 163554790 163554832 -39530700 + MIR SINE MIR 141 182 -80 204 135 0 0 chr5 163554843 163554880 -39530652 + (CA)n Simple_repeat Simple_repeat 2 38 0 1492 180 69 7 chr5 163554894 163555065 -39530467 - AluJo SINE Alu -5 307 109 277 23 23 23 chr5 163555065 163555108 -39530424 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1492 180 69 7 chr5 163555108 163555225 -39530307 - AluJo SINE Alu -203 109 1 367 257 236 7 chr5 163555607 163555755 -39529777 - MER5A DNA MER1_type -3 186 5 498 266 102 0 chr5 163555766 163555894 -39529638 - MER5A DNA MER1_type 0 189 49 248 225 112 0 chr5 163556060 163556149 -39529383 + MER103 DNA DNA 9 107 -59 234 374 41 14 chr5 163556353 163556500 -39529032 + L3 LINE CR1 1427 1577 0 2560 142 52 17 chr5 163556613 163557129 -39528403 - L1MA9 LINE L1 -4 6308 5775 24 0 0 0 chr5 163557155 163557179 -39528353 + AT_rich Low_complexity Low_complexity 1 24 0 1993 100 0 11 chr5 163557179 163557449 -39528083 + AluSx SINE Alu 39 305 -7 1697 145 119 25 chr5 163557452 163557846 -39527686 + L1 LINE L1 4265 4695 -1451 2887 287 80 88 chr5 163557904 163557963 -39527569 + L2 LINE L2 1479 1537 -1776 2076 123 3 3 chr5 163557963 163558263 -39527269 - AluSp SINE Alu -13 300 1 2887 287 80 88 chr5 163558263 163559566 -39525966 + L2 LINE L2 1537 2824 -489 1582 142 0 4 chr5 163559566 163559799 -39525733 - AluSg SINE Alu -30 280 49 2887 287 80 88 chr5 163559799 163560170 -39525362 + L2 LINE L2 2824 3197 -116 2555 224 38 27 chr5 163560276 163561103 -39524429 - L1ME1 LINE L1 -110 6056 5219 380 269 55 128 chr5 163561912 163562131 -39523401 - MIR SINE MIR -12 250 48 26 82 0 0 chr5 163562541 163562602 -39522930 + AT_rich Low_complexity Low_complexity 1 61 0 895 313 26 26 chr5 163562645 163562996 -39522536 - L2 LINE L2 -36 3277 2927 579 290 112 15 chr5 163562998 163563257 -39522275 - L2 LINE L2 -1034 2280 1997 326 393 18 13 chr5 163563259 163563483 -39522049 + L2 LINE L2 2646 2870 -444 490 305 29 52 chr5 163563483 163563657 -39521875 - L2 LINE L2 0 3313 3144 435 264 0 0 chr5 163563656 163563747 -39521785 + L2 LINE L2 3200 3290 -23 * 5020 34 0 0 chr5 163563863 163564456 -39521076 - L1P LINE L1 -1859 4287 3695 7264 47 2 0 chr5 163564457 163565973 -39519559 + L1PA5 LINE L1 4637 6154 0 2241 79 0 17 chr5 163565991 163566282 -39519250 + AluY SINE Alu 1 286 -25 224 30 30 0 chr5 163566286 163566319 -39519213 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 218 217 0 0 chr5 163566886 163566932 -39518600 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 387 290 130 10 chr5 163568422 163568629 -39516903 + MIR SINE MIR 31 262 0 833 244 51 72 chr5 163569013 163569345 -39516187 + MLT1D LTR MaLR 1 325 -180 283 222 0 141 chr5 163569368 163569416 -39516116 + MER20 DNA MER1_type 1 31 -188 1493 175 10 45 chr5 163569416 163569826 -39515706 + AluJb SINE Alu 1 400 0 283 222 0 141 chr5 163569826 163569875 -39515657 + MER20 DNA MER1_type 31 85 -134 210 37 0 0 chr5 163569898 163569925 -39515607 + (TG)n Simple_repeat Simple_repeat 2 28 0 411 191 0 40 chr5 163569925 163570072 -39515460 + (TA)n Simple_repeat Simple_repeat 2 142 0 200 176 0 0 chr5 163570078 163570112 -39515420 + (TG)n Simple_repeat Simple_repeat 2 35 0 225 0 0 0 chr5 163570112 163570137 -39515395 + (CA)n Simple_repeat Simple_repeat 2 26 0 812 221 6 6 chr5 163570148 163570320 -39515212 + MLT1D LTR MaLR 334 505 0 1608 286 48 37 chr5 163570441 163570727 -39514805 - L2 LINE L2 -662 2652 2371 1919 147 0 0 chr5 163570727 163571000 -39514532 + AluSx SINE Alu 1 273 -39 1608 286 48 37 chr5 163571000 163571361 -39514171 - L2 LINE L2 -943 2371 1998 479 220 37 9 chr5 163571430 163571539 -39513993 - MER20 DNA MER1_type 0 219 108 227 315 0 0 chr5 163571573 163571646 -39513886 + L1MC4 LINE L1 6614 6686 -1356 213 108 0 0 chr5 163572423 163572460 -39513072 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2203 268 127 24 chr5 163572470 163573444 -39512088 - L2 LINE L2 -2 3311 2212 583 252 47 72 chr5 163573544 163574075 -39511457 + L1MC5 LINE L1 7408 7925 -36 2128 120 3 0 chr5 163574084 163574384 -39511148 + AluSq SINE Alu 1 301 -12 303 243 58 39 chr5 163574408 163574511 -39511021 + L2 LINE L2 3196 3300 -13 1369 226 6 9 chr5 163575140 163575458 -39510074 - MER45B DNA AcHobo -2 1038 722 1248 286 153 66 chr5 163575571 163576285 -39509247 - MER45C DNA AcHobo -174 779 4 195 212 0 0 chr5 163576747 163576780 -39508752 - L2 LINE L2 -17 3255 3223 21 57 0 0 chr5 163576893 163576928 -39508604 + AT_rich Low_complexity Low_complexity 1 35 0 288 28 0 0 chr5 163576956 163576992 -39508540 + MER53 DNA DNA 149 184 -5 21 36 0 0 chr5 163577821 163577849 -39507683 + AT_rich Low_complexity Low_complexity 1 28 0 224 238 0 0 chr5 163579185 163579227 -39506305 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 225 180 0 0 chr5 163579228 163579278 -39506254 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 325 315 35 14 chr5 163579282 163579425 -39506107 + Charlie8 DNA MER1_type 120 265 -2152 255 215 215 0 chr5 163580304 163580397 -39505135 + MIR SINE MIR 117 229 -33 2476 77 0 0 chr5 163580474 163580785 -39504747 + AluY SINE Alu 1 311 0 687 279 73 14 chr5 163581034 163581140 -39504392 + L1MC/D LINE L1 5339 5437 -761 252 0 0 0 chr5 163581140 163581168 -39504364 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 279 73 14 chr5 163581168 163581322 -39504210 + L1MC/D LINE L1 5437 5618 -580 6091 107 3 9 chr5 163581548 163583080 -39502452 - L1PA13 LINE L1 -5 6158 4630 2213 0 0 0 chr5 163583080 163583326 -39502206 - L1PA2 LINE L1 -1 6154 5909 2343 261 55 52 chr5 163583358 163584230 -39501302 + L1M4b LINE L1 60 934 -5925 1376 196 38 54 chr5 163584775 163585219 -39500313 + L1M4b LINE L1 1239 1675 -5184 212 120 0 40 chr5 163585261 163585311 -39500221 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 354 379 63 5 chr5 163585357 163585547 -39499985 - L2 LINE L2 -181 3091 2891 625 354 67 38 chr5 163585794 163586241 -39499291 + L2 LINE L2 2813 3272 0 973 199 93 32 chr5 163586365 163586802 -39498730 + MLT1D LTR MaLR 1 497 -8 297 109 0 0 chr5 163587462 163587508 -39498024 + (A)n Simple_repeat Simple_repeat 1 46 0 2601 322 85 35 chr5 163588940 163590293 -39495239 + ERVL LTR ERVL 1766 3186 -2578 1245 317 51 22 chr5 163590394 163591149 -39494383 + ERVL LTR ERVL 3322 4123 -1641 789 314 102 23 chr5 163591380 163591819 -39493713 + ERVL LTR ERVL 4408 4811 -674 216 0 0 0 chr5 163591819 163591843 -39493689 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 789 314 102 23 chr5 163591843 163592205 -39493327 + ERVL LTR ERVL 4811 5271 -214 189 300 88 0 chr5 163592441 163592521 -39493011 + MIR3 SINE MIR 112 198 -10 21 57 0 0 chr5 163593783 163593818 -39491714 + AT_rich Low_complexity Low_complexity 1 35 0 798 140 0 0 chr5 163594354 163594468 -39491064 - MSTB1 LTR MaLR -318 114 1 425 288 201 15 chr5 163595101 163595526 -39490006 - L2 LINE L2 -55 3258 2702 1196 214 123 36 chr5 163595540 163595961 -39489571 - L1ME1 LINE L1 -27 6139 5682 216 0 0 0 chr5 163595991 163596015 -39489517 + (T)n Simple_repeat Simple_repeat 1 24 0 760 28 0 65 chr5 163596052 163596160 -39489372 + L1PA4 LINE L1 6055 6155 0 825 263 40 5 chr5 163596173 163596397 -39489135 - L1ME1 LINE L1 -476 5690 5459 926 301 103 73 chr5 163596398 163597040 -39488492 - L2 LINE L2 -601 2713 2053 1009 340 60 22 chr5 163597518 163598151 -39487381 + L2 LINE L2 2658 3312 -1 526 111 0 0 chr5 163598827 163598899 -39486633 + MLT1C LTR MaLR 1 72 -395 243 88 0 0 chr5 163599260 163599294 -39486238 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 507 298 88 13 chr5 163599481 163599719 -39485813 - L2 LINE L2 -668 2646 2391 485 135 6 17 chr5 163601124 163601207 -39484325 + THE1B LTR MaLR 279 364 0 2584 195 20 2 chr5 163601542 163601989 -39483543 + LTR32 LTR ERVL 17 471 0 444 291 71 45 chr5 163602334 163602565 -39482967 - MIR SINE MIR -21 241 4 707 233 124 10 chr5 163603036 163603229 -39482303 + MER58C DNA MER1_type 1 215 0 232 269 81 108 chr5 163603652 163603912 -39481620 - LTR16A LTR ERVL -4 446 194 2073 113 50 0 chr5 163603991 163604273 -39481259 - AluSx SINE Alu -16 296 1 627 294 127 17 chr5 163604769 163605068 -39480464 + L2 LINE L2 2638 2969 -345 1665 205 22 8 chr5 163605090 163605461 -39480071 - L1MD3 LINE L1 -11 7984 7609 532 272 152 50 chr5 163605496 163605779 -39479753 + L2 LINE L2 2998 3309 -4 207 299 75 82 chr5 163606620 163606754 -39478778 - L2 LINE L2 -6 3266 3134 524 384 119 6 chr5 163606938 163607469 -39478063 - L2 LINE L2 -896 2418 1828 1438 169 42 109 chr5 163607740 163608172 -39477360 - MER57A LTR ERV1 0 403 1 303 255 57 9 chr5 163608662 163608768 -39476764 - L1ME2 LINE L1 -3 6161 6051 7598 190 14 45 chr5 163608829 163610575 -39474957 - L1PA16 LINE L1 -5 6161 4363 252 0 0 0 chr5 163610575 163610603 -39474929 + (TG)n Simple_repeat Simple_repeat 2 29 0 7598 190 14 45 chr5 163610603 163610783 -39474749 - L1PA16 LINE L1 -1803 4363 4179 6214 70 1 2 chr5 163610783 163611586 -39473946 + L1PA7 LINE L1 5338 6141 -13 7598 190 14 45 chr5 163611586 163612342 -39473190 - L1PA16 LINE L1 -1987 4179 3582 1392 224 31 14 chr5 163612342 163612628 -39472904 - AluJb SINE Alu -21 291 1 7598 190 14 45 chr5 163612628 163612890 -39472642 - L1PA16 LINE L1 -2584 3582 3314 1542 256 103 12 chr5 163612890 163613640 -39471892 - L1ME2 LINE L1 -176 5988 5161 1019 306 25 41 chr5 163613641 163614206 -39471326 + L1MEc LINE L1 1535 2090 -4306 2843 246 39 38 chr5 163614227 163615114 -39470418 + L1MEc LINE L1 2730 3620 -2595 1342 199 46 21 chr5 163615114 163615395 -39470137 + AluJb SINE Alu 1 288 -14 2843 246 39 38 chr5 163615395 163615545 -39469987 + L1MEc LINE L1 3620 3768 -2447 * 3279 3 0 0 chr5 163615543 163615908 -39469624 + L1HS LINE L1 5791 6155 0 4169 209 38 37 chr5 163615910 163616483 -39469049 + L1MEc LINE L1 3753 4324 -1891 303 93 0 0 chr5 163616483 163616526 -39469006 + (CA)n Simple_repeat Simple_repeat 2 44 0 4169 209 38 37 chr5 163616526 163617150 -39468382 + L1MEc LINE L1 4324 4952 -1263 469 306 36 9 chr5 163617270 163617607 -39467925 - L1ME2 LINE L1 -2767 3379 3034 210 372 0 0 chr5 163617731 163617825 -39467707 - MIR SINE MIR -123 139 46 6807 66 22 0 chr5 163618216 163619142 -39466390 - L1PA7 LINE L1 0 6154 5221 1485 94 5 15 chr5 163619143 163619346 -39466186 + AluY SINE Alu 1 201 -110 371 103 17 0 chr5 163619346 163619404 -39466128 + AluY SINE Alu 237 295 -5 2492 73 0 0 chr5 163619404 163619734 -39465798 - L1PA7 LINE L1 -924 5222 4893 * 8052 91 7 0 chr5 163619728 163620857 -39464675 + L1PA7 LINE L1 3758 4894 -1252 26 82 0 0 chr5 163621613 163621674 -39463858 + AT_rich Low_complexity Low_complexity 1 61 0 2058 216 20 0 chr5 163621689 163622097 -39463435 + MER47B DNA MER2_type 3 418 0 258 56 0 0 chr5 163622138 163622174 -39463358 + (TG)n Simple_repeat Simple_repeat 1 36 0 715 193 67 7 chr5 163622283 163622433 -39463099 + MER6B DNA MER2_type 52 210 0 33 25 0 0 chr5 163623733 163623773 -39461759 + AT_rich Low_complexity Low_complexity 1 40 0 489 300 42 4 chr5 163624805 163625027 -39460505 - L1MC/D LINE L1 -304 5817 5594 624 254 88 9 chr5 163625234 163625451 -39460081 + MLT1J2 LTR MaLR 1 234 -216 456 322 104 5 chr5 163625868 163626070 -39459462 - MIR SINE MIR 0 262 41 188 189 0 0 chr5 163626105 163626142 -39459390 + MIR SINE MIR 152 188 -74 280 307 134 30 chr5 163626881 163627083 -39458449 - MIR SINE MIR 0 262 40 703 318 46 8 chr5 163627170 163627409 -39458123 - MIR SINE MIR -11 251 4 2044 103 0 64 chr5 163628136 163628447 -39457085 + AluSq SINE Alu 1 291 -22 252 324 15 0 chr5 163628826 163628894 -39456638 - L2 LINE L2 -3 3269 3201 1520 234 66 18 chr5 163629154 163629595 -39455937 - MLT1C LTR MaLR 0 467 6 324 363 113 14 chr5 163629696 163630049 -39455483 - L2 LINE L2 -424 2890 2503 391 339 165 15 chr5 163630326 163630653 -39454879 - MLT1K LTR MaLR -116 472 97 195 162 0 0 chr5 163630834 163630871 -39454661 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 205 399 36 30 chr5 163631061 163631333 -39454199 - L2 LINE L2 -204 3068 2791 21 36 0 0 chr5 163631535 163631563 -39453969 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr5 163632390 163632416 -39453116 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 337 354 56 19 chr5 163632560 163632721 -39452811 - MIR SINE MIR -77 185 19 397 320 75 0 chr5 163633143 163633290 -39452242 + MIR SINE MIR 75 232 -30 183 42 0 0 chr5 163633928 163633952 -39451580 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1893 189 31 11 chr5 163633984 163634366 -39451166 - MLT1B LTR MaLR 0 390 1 578 337 96 4 chr5 163635303 163635782 -39449750 + L2 LINE L2 2721 3253 -60 222 37 0 0 chr5 163635798 163635825 -39449707 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 424 292 68 12 chr5 163636843 163637004 -39448528 - L2 LINE L2 -643 2671 2502 552 42 0 0 chr5 163638046 163638117 -39447415 + (TC)n Simple_repeat Simple_repeat 2 72 0 189 0 0 0 chr5 163638116 163638137 -39447395 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 264 300 131 23 chr5 163638454 163638584 -39446948 + L1ME LINE L1 5524 5667 -454 26 30 0 0 chr5 163638644 163638677 -39446855 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 163638794 163638817 -39446715 + AT_rich Low_complexity Low_complexity 1 23 0 201 259 0 19 chr5 163638852 163638906 -39446626 + L2 LINE L2 3261 3313 0 656 287 32 19 chr5 163639574 163639790 -39445742 - MIR SINE MIR -26 236 18 256 200 0 77 chr5 163639843 163639908 -39445624 + L2 LINE L2 3254 3313 0 1296 273 76 32 chr5 163639962 163640434 -39445098 - MLT1F1 LTR MaLR -12 555 63 2873 108 25 35 chr5 163640568 163641051 -39444481 - L1MA9 LINE L1 -353 5959 5482 1991 162 16 14 chr5 163641051 163641419 -39444113 + L1MA9 LINE L1 5942 6312 0 309 288 0 0 chr5 163641583 163641656 -39443876 + L2 LINE L2 3240 3312 -1 207 310 0 0 chr5 163642401 163642459 -39443073 + (CA)n Simple_repeat Simple_repeat 1 58 0 37 0 0 0 chr5 163643969 163644006 -39441526 + AT_rich Low_complexity Low_complexity 1 37 0 787 206 7 0 chr5 163644006 163644142 -39441390 - AluJ SINE Alu -31 281 145 642 186 0 9 chr5 163644140 163644253 -39441279 - AluJ SINE Alu -200 112 1 * 398 274 181 38 chr5 163644288 163644554 -39440978 + L2 LINE L2 3005 3308 -5 531 255 170 11 chr5 163644567 163644755 -39440777 - MIR SINE MIR -4 258 41 246 192 0 0 chr5 163644787 163644839 -39440693 + CT-rich Low_complexity Low_complexity 3 54 0 268 286 51 21 chr5 163645129 163645363 -39440169 - L1ME2 LINE L1 -212 5952 5712 1191 199 89 16 chr5 163645377 163645613 -39439919 - MER44D DNA MER2_type -1882 609 392 2604 83 11 16 chr5 163645613 163645985 -39439547 - L1PB1 LINE L1 0 6151 5782 1191 199 89 16 chr5 163645985 163646064 -39439468 - MER44D DNA MER2_type -2099 392 1 284 269 109 19 chr5 163646276 163646432 -39439100 - L1MEd LINE L1 -2621 3508 3339 751 216 97 5 chr5 163646497 163646682 -39438850 + LTR50 LTR ERVL 9 210 -585 504 256 173 16 chr5 163646861 163647115 -39438417 + LTR50 LTR ERVL 499 792 -3 252 261 80 40 chr5 163647118 163647294 -39438238 - L1MEd LINE L1 -3092 3037 2855 329 242 33 22 chr5 163647452 163647543 -39437989 - MLT1G LTR MaLR -4 545 454 456 254 119 26 chr5 163647739 163647979 -39437553 - MLT1G LTR MaLR -317 273 14 22 0 0 0 chr5 163648097 163648119 -39437413 + AT_rich Low_complexity Low_complexity 1 22 0 591 316 77 56 chr5 163648223 163648941 -39436591 - L1MEd LINE L1 -5058 1061 329 279 0 0 0 chr5 163649100 163649131 -39436401 + (TG)n Simple_repeat Simple_repeat 1 31 0 2485 76 3 13 chr5 163650522 163650836 -39434696 + AluSq SINE Alu 1 311 -2 823 229 40 5 chr5 163651305 163651506 -39434026 + MER3 DNA MER1_type 1 208 -1 300 309 58 14 chr5 163653674 163653813 -39431719 - MIR SINE MIR -28 234 90 222 118 0 0 chr5 163653962 163653996 -39431536 + (TG)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr5 163653995 163654019 -39431513 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 438 279 74 61 chr5 163654106 163654824 -39430708 + L1ME4a LINE L1 5278 6009 -112 24 32 0 0 chr5 163654923 163654954 -39430578 + AT_rich Low_complexity Low_complexity 1 31 0 424 263 80 7 chr5 163655325 163655462 -39430070 - L2 LINE L2 0 3313 3167 597 250 42 6 chr5 163656141 163656309 -39429223 - MER112 DNA MER1_type -1 259 86 222 37 0 0 chr5 163656316 163656343 -39429189 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 307 309 34 20 chr5 163657457 163657606 -39427926 + MIR SINE MIR 112 262 0 7894 224 42 71 chr5 163657645 163658948 -39426584 - L1MA2 LINE L1 -5 7361 6021 2394 76 0 0 chr5 163658948 163659250 -39426282 + AluY SINE Alu 1 302 -9 7894 224 42 71 chr5 163659250 163660690 -39424842 - L1MA2 LINE L1 -1345 6021 4540 502 193 0 0 chr5 163660690 163660778 -39424754 + AluJ/FLAM SINE Alu 1 88 -224 7894 224 42 71 chr5 163660778 163660811 -39424721 - L1MA2 LINE L1 -2826 4540 4508 195 42 0 0 chr5 163660811 163660835 -39424697 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7894 224 42 71 chr5 163660835 163660854 -39424678 - L1MA2 LINE L1 -2858 4508 4490 2365 85 3 0 chr5 163660854 163661160 -39424372 - AluY SINE Alu -4 307 1 7894 224 42 71 chr5 163661160 163664556 -39420976 - L1MA2 LINE L1 -2876 4490 1673 1379 339 34 27 chr5 163664841 163665550 -39419982 - L1MA2 LINE L1 -6453 756 43 238 150 17 17 chr5 163665621 163665681 -39419851 + (TA)n Simple_repeat Simple_repeat 1 60 0 2386 57 7 13 chr5 163666488 163666789 -39418743 + AluY SINE Alu 1 299 -12 342 0 0 0 chr5 163666789 163666827 -39418705 + (TA)n Simple_repeat Simple_repeat 2 39 0 971 293 80 30 chr5 163667003 163667478 -39418054 - LTR33 LTR ERVL -20 501 3 2994 222 33 51 chr5 163669126 163670151 -39415381 + L1ME1 LINE L1 5112 6117 -49 298 303 28 21 chr5 163670062 163670207 -39415325 + L1MA10 LINE L1 6186 6331 -3 * 573 263 96 15 chr5 163670693 163670891 -39414641 + MIR SINE MIR 46 259 -3 23160 26 7 0 chr5 163671565 163675090 -39410442 + L1PA2 LINE L1 2624 6155 0 7118 180 16 2 chr5 163675093 163676484 -39409048 - L1 LINE L1 -745 5401 3992 1654 233 43 96 chr5 163676764 163677349 -39408183 + MLT2B3 LTR ERVL 1 554 0 998 187 0 43 chr5 163677610 163677770 -39407762 - AluJo SINE Alu -25 287 135 216 0 0 0 chr5 163677770 163677794 -39407738 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 998 187 0 43 chr5 163677794 163677820 -39407712 - AluJo SINE Alu -177 135 109 511 328 94 35 chr5 163678078 163678483 -39407049 - L2 LINE L2 0 3313 2885 21 36 0 0 chr5 163679093 163679121 -39406411 + AT_rich Low_complexity Low_complexity 1 28 0 590 343 32 12 chr5 163679569 163679820 -39405712 - MIR SINE MIR -2 260 5 195 129 0 0 chr5 163680518 163680549 -39404983 + (A)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr5 163680965 163680993 -39404539 + AT_rich Low_complexity Low_complexity 1 28 0 424 270 26 33 chr5 163681248 163681400 -39404132 - MIR SINE MIR -64 198 48 267 329 101 32 chr5 163681817 163681975 -39403557 - MER5B DNA MER1_type 0 178 10 825 314 79 60 chr5 163682088 163683064 -39402468 + L2 LINE L2 2267 3305 -8 750 290 78 67 chr5 163684201 163684712 -39400820 - MLT1G LTR MaLR -2 588 72 24 0 0 0 chr5 163684959 163684983 -39400549 + AT_rich Low_complexity Low_complexity 1 24 0 672 13 0 0 chr5 163685133 163685210 -39400322 + (TATTG)n Simple_repeat Simple_repeat 2 78 0 1100 174 0 11 chr5 163685210 163685394 -39400138 - AluSg/x SINE Alu -26 284 103 310 291 185 16 chr5 163685748 163685937 -39399595 - MIR SINE MIR -11 251 31 766 237 20 73 chr5 163687251 163687496 -39398036 - MLT1K LTR MaLR -2 586 355 3631 134 16 13 chr5 163688443 163689061 -39396471 + L1MA3 LINE L1 5686 6305 0 2171 106 0 0 chr5 163689074 163689385 -39396147 + AluSx SINE Alu 1 311 0 235 179 179 13 chr5 163689665 163689743 -39395789 + L1ME4a LINE L1 5577 5667 -454 255 114 0 0 chr5 163690042 163690086 -39395446 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 236 264 117 31 chr5 163690113 163690276 -39395256 + L1ME4a LINE L1 5938 6114 -7 183 80 0 0 chr5 163690812 163690837 -39394695 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 456 35 0 0 chr5 163691234 163691292 -39394240 + (TG)n Simple_repeat Simple_repeat 1 58 0 1858 147 0 34 chr5 163692202 163692529 -39393003 - AluSx SINE Alu 0 317 1 809 215 48 21 chr5 163692530 163692716 -39392816 - L1PA16 LINE L1 -12 6154 5964 223 244 31 87 chr5 163693659 163693786 -39391746 + MIR SINE MIR 97 216 -46 306 369 68 28 chr5 163693834 163694010 -39391522 + MLT1K LTR MaLR 58 240 -348 294 146 62 0 chr5 163694905 163695001 -39390531 + (TA)n Simple_repeat Simple_repeat 2 103 0 329 287 125 7 chr5 163695391 163695527 -39390005 + MIR SINE MIR 81 232 -30 510 371 47 24 chr5 163696243 163696496 -39389036 - MIR SINE MIR 0 262 4 212 225 50 125 chr5 163696716 163696836 -39388696 - L2 LINE L2 -32 3281 3171 834 221 28 0 chr5 163696899 163697080 -39388452 + MER5A DNA MER1_type 3 188 -1 269 343 86 47 chr5 163697125 163697358 -39388174 - L2 LINE L2 -345 2969 2728 2108 134 3 0 chr5 163697774 163698073 -39387459 - AluSg SINE Alu -10 300 1 301 284 65 52 chr5 163698101 163698256 -39387276 + LTR16C LTR ERVL 331 487 -4 397 259 47 47 chr5 163698291 163698461 -39387071 - L2 LINE L2 -32 3281 3112 230 297 14 0 chr5 163698547 163698621 -39386911 - L2 LINE L2 -1053 2261 2187 496 222 20 0 chr5 163699618 163699717 -39385815 - MER63 DNA MER1_type -275 787 687 391 185 12 12 chr5 163699779 163699860 -39385672 - MER5A DNA MER1_type -99 90 10 534 174 76 28 chr5 163700007 163700151 -39385381 + MIR SINE MIR 101 251 -11 219 119 48 0 chr5 163701506 163701548 -39383984 + A-rich Low_complexity Low_complexity 1 44 0 189 107 0 0 chr5 163702116 163702144 -39383388 + (T)n Simple_repeat Simple_repeat 1 28 0 2224 70 0 48 chr5 163702934 163703248 -39382284 + AluY SINE Alu 1 299 -12 226 309 86 0 chr5 163703441 163703522 -39382010 + L1ME4a LINE L1 5990 6077 -44 1906 160 0 3 chr5 163703710 163704003 -39381529 + AluSx SINE Alu 4 295 -17 247 269 145 7 chr5 163704060 163704205 -39381327 + MER103 DNA DNA 2 166 0 259 197 16 0 chr5 163704287 163704348 -39381184 + (TA)n Simple_repeat Simple_repeat 2 63 0 427 171 14 2 chr5 163704350 163704445 -39381087 - L1MA8 LINE L1 -83 6106 6015 21 82 0 0 chr5 163704518 163704567 -39380965 + AT_rich Low_complexity Low_complexity 1 49 0 182 280 120 13 chr5 163704585 163704660 -39380872 - L2 LINE L2 -74 3198 3116 311 170 65 0 chr5 163704834 163704987 -39380545 + (TA)n Simple_repeat Simple_repeat 2 164 0 439 125 0 0 chr5 163705042 163705106 -39380426 + AluJ/FLAM SINE Alu 1 64 -248 243 0 0 0 chr5 163705114 163705141 -39380391 + (A)n Simple_repeat Simple_repeat 1 27 0 1096 153 25 25 chr5 163705145 163705387 -39380145 + L1MA8 LINE L1 6048 6289 -2 2113 116 0 3 chr5 163705396 163705713 -39379819 + AluSq SINE Alu 1 316 0 219 333 225 0 chr5 163705888 163706008 -39379524 + L2 LINE L2 3122 3268 -4 564 152 19 38 chr5 163707068 163707173 -39378359 - MLT1A2 LTR MaLR -259 106 4 1043 179 134 0 chr5 163707178 163707401 -39378131 + MER67D LTR ERV1 262 514 0 323 335 138 49 chr5 163707612 163707880 -39377652 + L2 LINE L2 2851 3165 -107 218 0 94 0 chr5 163707880 163707912 -39377620 + T-rich Low_complexity Low_complexity 2 36 0 323 335 138 49 chr5 163707912 163708028 -39377504 + L2 LINE L2 3165 3269 -3 236 302 62 10 chr5 163708219 163708315 -39377217 + MIR SINE MIR 47 147 -115 269 194 134 0 chr5 163708330 163708391 -39377141 - MLT1B LTR MaLR -170 220 151 2281 157 25 15 chr5 163708391 163708786 -39376746 + MSTA LTR MaLR 1 399 -29 1468 76 5 0 chr5 163708790 163708988 -39376544 - L1PA7 LINE L1 0 6154 5956 437 181 0 151 chr5 163709341 163709507 -39376025 + MER102a DNA MER1_type 190 330 0 465 231 134 0 chr5 163710683 163710817 -39374715 + MIR SINE MIR 8 159 -103 2064 148 20 12 chr5 163711239 163711583 -39373949 + MER7A DNA MER2_type 1 345 -1 414 238 49 63 chr5 163711584 163711727 -39373805 + MIR SINE MIR 116 256 -6 221 57 29 0 chr5 163712221 163712256 -39373276 + (CCCCCT)n Simple_repeat Simple_repeat 4 39 0 3596 38 0 11 chr5 163712638 163713082 -39372450 + L1PA3 LINE L1 5706 6144 -11 1872 157 32 0 chr5 163713095 163713439 -39372093 + L1MA2 LINE L1 5950 6304 0 806 159 0 0 chr5 163713442 163713599 -39371933 + L1PA15 LINE L1 5175 5331 -815 1438 133 0 58 chr5 163713599 163713839 -39371693 + AluSx SINE Alu 1 226 -86 2470 110 32 34 chr5 163713839 163714165 -39371367 + L1PA15 LINE L1 5451 5776 -389 2172 94 3 0 chr5 163714165 163714452 -39371080 + AluSq SINE Alu 1 288 -25 195 42 0 0 chr5 163714452 163714476 -39371056 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 2470 110 32 34 chr5 163714476 163714558 -39370974 + L1PA15 LINE L1 5774 5859 -306 346 272 228 0 chr5 163714835 163715041 -39370491 - HAL1b LINE L1 -971 377 125 2065 120 0 3 chr5 163715080 163715372 -39370160 - AluY SINE Alu -20 291 1 266 105 0 0 chr5 163715372 163715410 -39370122 - L2 LINE L2 -951 2363 2326 246 311 74 25 chr5 163715768 163715890 -39369642 - MIR SINE MIR -61 147 20 6431 41 3 7 chr5 163716022 163717248 -39368284 - L1PA3 LINE L1 -156 5999 4780 317 111 0 0 chr5 163717248 163717293 -39368239 + MSTA LTR MaLR 382 426 -2 297 197 171 10 chr5 163717294 163717421 -39368111 - MLT1C LTR MaLR -235 155 2 21 36 0 0 chr5 163718510 163718538 -39366994 + AT_rich Low_complexity Low_complexity 1 28 0 247 206 48 0 chr5 163718548 163718713 -39366819 + (TA)n Simple_repeat Simple_repeat 2 174 0 198 212 53 0 chr5 163718757 163718927 -39366605 + (TA)n Simple_repeat Simple_repeat 2 180 0 403 188 49 1 chr5 163718942 163719673 -39365859 + (TA)n Simple_repeat Simple_repeat 1 766 0 379 179 51 0 chr5 163719724 163720028 -39365504 + (TA)n Simple_repeat Simple_repeat 1 319 0 561 246 142 11 chr5 163720381 163720564 -39364968 + MIR SINE MIR 47 253 -9 565 332 94 61 chr5 163720831 163721324 -39364208 - L2 LINE L2 0 3272 2749 600 213 24 0 chr5 163721324 163721451 -39364081 - MER94 DNA DNA 0 134 5 565 332 94 61 chr5 163721451 163721688 -39363844 - L2 LINE L2 -523 2749 2521 1980 118 26 4 chr5 163721739 163722010 -39363522 + AluSx SINE Alu 1 277 -35 207 0 0 0 chr5 163723148 163723171 -39362361 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 379 255 61 0 chr5 163723739 163723837 -39361695 - MER5A DNA MER1_type -77 112 9 881 60 0 26 chr5 163724280 163724396 -39361136 - L1PA10 LINE L1 -9 6159 6047 1239 129 0 5 chr5 163724397 163724590 -39360942 + L1P4 LINE L1 5362 5553 -615 235 254 0 16 chr5 163724679 163724742 -39360790 + MIR SINE MIR 200 261 -1 1063 104 80 0 chr5 163724781 163724944 -39360588 - L1MA2 LINE L1 0 6304 6129 2193 92 0 4 chr5 163725261 163725542 -39359990 + AluSx SINE Alu 1 280 -32 369 131 0 0 chr5 163725542 163725603 -39359929 + (GA)n Simple_repeat Simple_repeat 1 61 0 1894 203 12 12 chr5 163727440 163727634 -39357898 - L1 LINE L1 -2356 3790 3597 620 62 0 0 chr5 163727634 163727714 -39357818 + MADE1 DNA Mariner 1 80 0 1894 203 12 12 chr5 163727714 163727928 -39357604 - L1 LINE L1 -2548 3598 3382 476 330 80 14 chr5 163728147 163728359 -39357173 + MIR SINE MIR 21 246 -16 383 288 16 48 chr5 163728527 163728652 -39356880 - L2 LINE L2 0 3272 3152 386 294 34 8 chr5 163728682 163728801 -39356731 - MIR SINE MIR -110 152 31 1681 191 3 13 chr5 163729423 163729737 -39355795 + AluJb SINE Alu 1 311 -1 259 360 40 20 chr5 163729744 163729894 -39355638 + L2 LINE L2 2725 2877 -437 396 0 0 0 chr5 163729991 163730035 -39355497 + (TTA)n Simple_repeat Simple_repeat 1 44 0 972 223 24 32 chr5 163731238 163731485 -39354047 + MIR SINE MIR 18 262 0 202 310 141 35 chr5 163731605 163731860 -39353672 + L2 LINE L2 2579 2860 -454 943 179 95 0 chr5 163732599 163732789 -39352743 - MER3 DNA MER1_type -1 208 1 262 155 56 99 chr5 163732792 163732863 -39352669 + L2 LINE L2 3203 3270 -2 736 299 104 24 chr5 163732951 163733366 -39352166 - LTR33 LTR ERVL -50 471 24 323 321 122 0 chr5 163733413 163733544 -39351988 + L2 LINE L2 3125 3271 -1 619 239 28 0 chr5 163734568 163734710 -39350822 + MIR SINE MIR 14 159 -103 1904 148 82 0 chr5 163734751 163735068 -39350464 + MER61A LTR ERV1 1 343 0 207 328 117 23 chr5 163736550 163736678 -39348854 - L2 LINE L2 -1 3312 3173 588 178 0 19 chr5 163736947 163737054 -39348478 - MSTD LTR MaLR -289 107 3 1874 248 67 26 chr5 163737092 163737660 -39347872 - L1MC4 LINE L1 -122 7920 7330 1360 228 86 8 chr5 163737734 163737807 -39347725 - L1MC4 LINE L1 -878 7164 7098 189 107 0 0 chr5 163737807 163737835 -39347697 + (TATG)n Simple_repeat Simple_repeat 1 28 0 1360 228 86 8 chr5 163737835 163738156 -39347376 - L1MC4 LINE L1 -944 7098 6739 238 204 0 0 chr5 163738156 163738200 -39347332 - L1M4 LINE L1 -3354 2792 2749 * 532 304 25 68 chr5 163738197 163738467 -39347065 + L1MEc LINE L1 34 289 -6107 2241 102 3 6 chr5 163738467 163738955 -39346577 + AluSp SINE Alu 1 313 0 532 304 25 68 chr5 163738955 163739006 -39346526 + L1MEc LINE L1 289 341 -6055 914 270 83 63 chr5 163739068 163739780 -39345752 + L1MEc LINE L1 1344 2069 -4327 1001 167 5 10 chr5 163739832 163740030 -39345502 + L1PB1 LINE L1 1 197 -6666 * 10674 191 67 26 chr5 163740027 163743086 -39342446 + L1PB1 LINE L1 1113 4552 -2315 2292 109 0 0 chr5 163743086 163743388 -39342144 + AluY SINE Alu 1 302 -9 10674 191 67 26 chr5 163743388 163745696 -39339836 + L1PB1 LINE L1 4552 6765 -102 636 173 14 43 chr5 163745726 163745865 -39339667 + L1MC2 LINE L1 6159 6293 -51 2219 129 0 0 chr5 163745870 163746180 -39339352 - AluSx SINE Alu -2 310 1 31 0 0 0 chr5 163746223 163746254 -39339278 + AT_rich Low_complexity Low_complexity 1 31 0 426 271 123 12 chr5 163746260 163746430 -39339102 + L1MEc LINE L1 2096 2284 -4112 197 128 0 77 chr5 163746739 163746778 -39338754 + L2 LINE L2 3267 3302 -11 25 0 0 0 chr5 163746984 163747009 -39338523 + AT_rich Low_complexity Low_complexity 1 25 0 2773 7 0 0 chr5 163747344 163747644 -39337888 + AluYa5 SINE Alu 1 300 -11 397 204 48 10 chr5 163747870 163747973 -39337559 - L1ME4a LINE L1 -4 6117 6011 496 212 84 125 chr5 163748054 163748351 -39337181 - MER102b DNA MER1_type -30 311 27 507 291 63 31 chr5 163748391 163748741 -39336791 - L1ME4a LINE L1 -232 5889 5529 21 57 0 0 chr5 163748769 163748804 -39336728 + AT_rich Low_complexity Low_complexity 1 35 0 342 256 77 26 chr5 163749355 163749472 -39336060 - L2 LINE L2 0 3313 3191 446 327 77 64 chr5 163749784 163750265 -39335267 - L2 LINE L2 -29 3243 2747 205 183 33 0 chr5 163750703 163750763 -39334769 + (TA)n Simple_repeat Simple_repeat 2 63 0 371 331 52 40 chr5 163750918 163751166 -39334366 - L2 LINE L2 -68 3245 2995 331 298 48 8 chr5 163753138 163753262 -39332270 + MER5B DNA MER1_type 2 130 -48 2283 120 25 3 chr5 163753271 163753629 -39331903 - L1PA16 LINE L1 -1 6165 5800 195 139 0 28 chr5 163753630 163753666 -39331866 - MER5A DNA MER1_type -115 74 40 183 235 0 39 chr5 163753631 163753682 -39331850 + MER5A DNA MER1_type 128 176 -13 * 26 50 0 0 chr5 163754520 163754560 -39330972 + AT_rich Low_complexity Low_complexity 1 40 0 1485 177 32 18 chr5 163754560 163754843 -39330689 - AluJb SINE Alu -25 287 1 2248 114 0 22 chr5 163757094 163757410 -39328122 + AluSg SINE Alu 1 309 -1 1282 224 97 6 chr5 163757475 163757940 -39327592 - MLT1F LTR MaLR -46 496 1 722 112 35 0 chr5 163758062 163758178 -39327354 - L1PB1 LINE L1 -1 6150 6031 687 306 28 14 chr5 163759023 163759239 -39326293 - MIR SINE MIR -21 241 23 238 241 139 58 chr5 163759568 163759705 -39325827 + MIR SINE MIR 98 245 -17 309 208 0 0 chr5 163759755 163759832 -39325700 + (TA)n Simple_repeat Simple_repeat 1 77 0 334 356 23 17 chr5 163759873 163760050 -39325482 - MIR SINE MIR -73 189 12 546 299 107 21 chr5 163761043 163761277 -39324255 - MIR SINE MIR -2 260 7 3813 138 47 18 chr5 163763082 163763761 -39321771 + LTR34 LTR ERV1 1 699 0 671 267 41 73 chr5 163763773 163764088 -39321444 + MLT1I LTR MaLR 85 389 -20 385 341 29 17 chr5 163764207 163764380 -39321152 + MER117 DNA MER1_type 15 189 -8 227 250 240 10 chr5 163764995 163765099 -39320433 - MIR SINE MIR -6 256 129 371 39 39 0 chr5 163765754 163765806 -39319726 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 198 292 300 0 chr5 163766120 163766250 -39319282 - L2 LINE L2 -25 3247 3079 463 308 115 12 chr5 163767119 163767616 -39317916 - L1ME4a LINE L1 0 6121 5574 735 298 23 23 chr5 163767768 163768026 -39317506 + MIR SINE MIR 2 259 -3 333 246 124 47 chr5 163768162 163768391 -39317141 + MLT1J2 LTR MaLR 199 444 -2 259 331 125 29 chr5 163769284 163769420 -39316112 - MIR SINE MIR -80 182 34 366 296 16 0 chr5 163770160 163770285 -39315247 - LTR33 LTR ERVL -2 519 393 204 97 0 0 chr5 163770464 163770495 -39315037 + (CAT)n Simple_repeat Simple_repeat 3 33 0 346 147 0 29 chr5 163770538 163770606 -39314926 - L1MC1 LINE L1 -414 5919 5854 1860 148 0 21 chr5 163770813 163771134 -39314398 - AluSx SINE Alu 0 315 1 266 382 18 18 chr5 163771183 163771293 -39314239 + L2 LINE L2 3137 3246 -26 21 0 0 0 chr5 163771809 163771830 -39313702 + AT_rich Low_complexity Low_complexity 1 21 0 264 59 0 0 chr5 163772283 163772317 -39313215 + (GA)n Simple_repeat Simple_repeat 2 35 0 313 229 12 36 chr5 163772638 163772721 -39312811 + MIR SINE MIR 70 150 -112 189 74 0 0 chr5 163772778 163772805 -39312727 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 259 325 26 13 chr5 163773206 163773283 -39312249 - L2 LINE L2 -52 3220 3143 249 33 0 0 chr5 163773417 163773447 -39312085 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 3132 160 25 73 chr5 163773589 163774314 -39311218 + LTR8 LTR ERV1 2 691 0 21 0 0 0 chr5 163774967 163774988 -39310544 + AT_rich Low_complexity Low_complexity 1 21 0 36 40 0 0 chr5 163775219 163775269 -39310263 + AT_rich Low_complexity Low_complexity 1 50 0 2145 118 0 14 chr5 163775392 163775689 -39309843 + AluSc SINE Alu 1 293 -16 423 38 0 0 chr5 163776792 163776845 -39308687 + (TC)n Simple_repeat Simple_repeat 1 53 0 656 272 71 0 chr5 163778971 163779140 -39306392 + MER5A DNA MER1_type 9 189 0 208 263 0 0 chr5 163779149 163779187 -39306345 + MER5A DNA MER1_type 55 92 -97 683 259 60 15 chr5 163779246 163779447 -39306085 + MIR SINE MIR 46 255 -7 859 183 91 0 chr5 163779578 163779753 -39305779 + L1MB3 LINE L1 5990 6180 -3 239 158 0 0 chr5 163779774 163779831 -39305701 + L1MB3 LINE L1 6127 6183 0 186 71 0 0 chr5 163780708 163780736 -39304796 + (A)n Simple_repeat Simple_repeat 1 28 0 302 343 56 28 chr5 163780737 163780880 -39304652 + MIR SINE MIR 39 185 -77 213 39 0 0 chr5 163780880 163780906 -39304626 + (CA)n Simple_repeat Simple_repeat 1 26 0 353 255 59 39 chr5 163780911 163781013 -39304519 + MER82 DNA MER2_type 458 561 -92 1113 279 63 72 chr5 163781657 163782370 -39303162 + L1MCc LINE L1 964 1867 -5114 1499 208 3 27 chr5 163782370 163782664 -39302868 + AluJo SINE Alu 1 287 -25 1113 279 63 72 chr5 163782664 163782863 -39302669 + L1MCc LINE L1 1867 2066 -4915 1047 229 90 13 chr5 163782864 163783165 -39302367 - MLT1D LTR MaLR -3 502 179 22 0 0 0 chr5 163783184 163783206 -39302326 + AT_rich Low_complexity Low_complexity 1 22 0 748 139 5 123 chr5 163783300 163783487 -39302045 - MLT1D LTR MaLR -460 166 2 1011 288 68 41 chr5 163783499 163784682 -39300850 + L1MCc LINE L1 2071 3221 -3720 2435 153 36 14 chr5 163784682 163785101 -39300431 + MSTA LTR MaLR 1 428 0 9192 166 23 16 chr5 163785101 163786741 -39298791 + MSTA-int LTR MaLR 1 1651 0 2515 137 31 21 chr5 163786741 163787165 -39298367 + MSTA LTR MaLR 1 428 0 1011 288 68 41 chr5 163787165 163787415 -39298117 + L1MCc LINE L1 3220 3506 -3435 653 119 0 0 chr5 163787453 163787554 -39297978 - L1MA2 LINE L1 -1 6303 6203 1333 112 5 0 chr5 163787559 163787756 -39297776 + L1PB1 LINE L1 3 200 -6663 9775 186 101 40 chr5 163787758 163788802 -39296730 + L1PB1 LINE L1 636 1615 -5247 180 0 0 0 chr5 163788802 163788822 -39296710 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 9775 186 101 40 chr5 163788822 163790777 -39294755 + L1PB1 LINE L1 1615 3449 -3413 882 170 14 0 chr5 163790777 163790918 -39294614 - AluSg/x SINE Alu -18 292 150 9775 186 101 40 chr5 163790918 163791570 -39293962 + L1PB1 LINE L1 3449 4060 -2802 2132 129 16 0 chr5 163791570 163791873 -39293659 + AluSq SINE Alu 1 308 -5 9775 186 101 40 chr5 163791873 163792093 -39293439 + L1PB1 LINE L1 4060 4265 -2597 234 0 0 0 chr5 163792093 163792119 -39293413 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 9775 186 101 40 chr5 163792119 163793018 -39292514 + L1PB1 LINE L1 4265 6033 -829 4674 94 23 0 chr5 163793220 163793903 -39291629 + L1PB1 LINE L1 6009 6707 -160 2983 89 0 5 chr5 163793903 163794295 -39291237 - MLT2A1 LTR ERVL -54 390 1 3711 156 34 5 chr5 163794295 163795325 -39290207 - L1MA3 LINE L1 -410 6537 5489 953 197 16 26 chr5 163795325 163795518 -39290014 - L1MA3 LINE L1 -6596 193 3 2655 251 72 6 chr5 163795540 163796577 -39288955 + L1M4 LINE L1 4104 5209 -937 367 228 57 8 chr5 163796615 163796738 -39288794 + L1ME2 LINE L1 4419 4547 -1599 339 164 0 0 chr5 163796738 163796799 -39288733 + (TA)n Simple_repeat Simple_repeat 1 61 0 2036 229 67 18 chr5 163796817 163797433 -39288099 + L1ME2 LINE L1 5330 5975 -189 26 0 0 0 chr5 163797501 163797527 -39288005 + AT_rich Low_complexity Low_complexity 1 26 0 2031 129 40 30 chr5 163797721 163798092 -39287440 - THE1C LTR MaLR 0 375 1 1435 194 82 0 chr5 163798124 163798392 -39287140 - AluJo SINE Alu -22 290 1 361 302 39 8 chr5 163799401 163799530 -39286002 + MIR SINE MIR 12 144 -118 263 310 53 102 chr5 163799774 163800077 -39285455 - L2 LINE L2 -376 2938 2651 342 345 44 32 chr5 163800648 163800897 -39284635 - L2 LINE L2 -196 3076 2825 2218 129 43 0 chr5 163801690 163802061 -39283471 - MLT1B LTR MaLR -3 387 1 326 212 141 0 chr5 163802065 163802150 -39283382 - L2 LINE L2 -13 3300 3204 614 260 48 72 chr5 163802638 163802888 -39282644 + MIR SINE MIR 7 250 -12 240 86 0 0 chr5 163803693 163803728 -39281804 + L2 LINE L2 3279 3313 0 303 394 52 0 chr5 163803734 163803889 -39281643 - MIR SINE MIR -76 186 24 223 303 30 0 chr5 163804038 163804104 -39281428 + L2 LINE L2 3185 3252 -20 1159 247 99 12 chr5 163804478 163804866 -39280666 + LTR16A LTR ERVL 26 446 -4 342 306 44 61 chr5 163804875 163805104 -39280428 + L2 LINE L2 2228 2452 -862 1970 244 106 20 chr5 163805106 163805651 -39279881 - MLT1E LTR MaLR 0 593 2 330 118 0 0 chr5 163806060 163806111 -39279421 + MADE1 DNA Mariner 30 80 0 479 323 60 0 chr5 163806281 163806448 -39279084 + MIR SINE MIR 57 233 -29 1117 57 0 0 chr5 163807401 163807541 -39277991 + L1PA3 LINE L1 6013 6152 -3 783 283 87 59 chr5 163807733 163808239 -39277293 - MLT1K LTR MaLR 0 588 69 340 345 107 0 chr5 163808745 163808913 -39276619 + MIR SINE MIR 76 261 -1 201 357 12 0 chr5 163808959 163809043 -39276489 + MIR SINE MIR 175 259 -3 2099 129 3 0 chr5 163809391 163809693 -39275839 - AluSx SINE Alu -5 307 5 688 301 70 9 chr5 163810862 163811091 -39274441 + MIR SINE MIR 13 255 -7 246 336 84 9 chr5 163811484 163811591 -39273941 - MIR SINE MIR -78 130 16 26 0 0 0 chr5 163811784 163811810 -39273722 + AT_rich Low_complexity Low_complexity 1 26 0 492 275 192 6 chr5 163811810 163811992 -39273540 - MIR SINE MIR 0 262 47 234 62 0 0 chr5 163812510 163812542 -39272990 + (CAA)n Simple_repeat Simple_repeat 2 33 0 828 247 46 39 chr5 163812942 163813201 -39272331 - MIR SINE MIR -1 261 1 543 308 66 15 chr5 163813228 163813426 -39272106 - MIR SINE MIR -14 248 41 2140 107 43 3 chr5 163813588 163813888 -39271644 - AluSx SINE Alu 0 312 1 7187 205 62 24 chr5 163813951 163813980 -39271552 - L1MC3 LINE L1 0 7785 7759 1600 168 151 84 chr5 163813980 163814491 -39271041 - MER44D DNA MER2_type -1 604 5 7187 205 62 24 chr5 163814491 163816852 -39268680 - L1MC3 LINE L1 -26 7759 5279 6459 50 0 0 chr5 163816852 163817640 -39267892 + L1PA5 LINE L1 5366 6153 -1 7187 205 62 24 chr5 163817640 163817785 -39267747 - L1MC3 LINE L1 -2506 5279 5141 1293 222 102 45 chr5 163817796 163817935 -39267597 + MLT1C LTR MaLR 44 174 -293 2302 102 3 0 chr5 163817935 163818239 -39267293 + AluSc SINE Alu 1 305 -4 1293 222 102 45 chr5 163818239 163818500 -39267032 + MLT1C LTR MaLR 174 467 0 1086 247 10 16 chr5 163818522 163818826 -39266706 - L1MC3 LINE L1 -1015 5131 4830 184 333 0 0 chr5 163819371 163819437 -39266095 + L2 LINE L2 3205 3270 -2 1449 197 0 46 chr5 163819604 163819888 -39265644 - AluJo SINE Alu -31 281 11 488 250 65 100 chr5 163819920 163820120 -39265412 + MER102a DNA MER1_type 135 327 -3 209 300 184 26 chr5 163820244 163820434 -39265098 - MIR SINE MIR -32 230 11 714 326 102 3 chr5 163820689 163821032 -39264500 + LTR16A LTR ERVL 61 437 -13 21 0 0 0 chr5 163821109 163821130 -39264402 + AT_rich Low_complexity Low_complexity 1 21 0 363 315 13 27 chr5 163822482 163822631 -39262901 - MIR3 SINE MIR 0 208 62 349 203 0 0 chr5 163822976 163823040 -39262492 + MSTD LTR MaLR 1 64 -364 7717 23 0 0 chr5 163823071 163824204 -39261328 - L1PA3 LINE L1 -3 6152 5020 9966 20 0 1 chr5 163824204 163825369 -39260163 + L1PA3 LINE L1 3849 5012 -1134 881 180 94 76 chr5 163825369 163825669 -39259863 + MSTD LTR MaLR 57 396 0 23 54 0 0 chr5 163825895 163825932 -39259600 + AT_rich Low_complexity Low_complexity 1 37 0 2172 228 72 115 chr5 163825935 163826513 -39259019 - L1MC5 LINE L1 -72 7889 7287 348 24 0 0 chr5 163826513 163826554 -39258978 + (TG)n Simple_repeat Simple_repeat 2 42 0 2172 228 72 115 chr5 163826554 163827352 -39258180 - L1MC5 LINE L1 -674 7287 6559 22 35 0 0 chr5 163827566 163827595 -39257937 + AT_rich Low_complexity Low_complexity 1 29 0 2000 229 75 54 chr5 163827955 163829026 -39256506 - L1ME LINE L1 -593 5571 4478 1686 127 92 7 chr5 163829033 163829316 -39256216 - AluSx SINE Alu -5 307 1 22 35 0 0 chr5 163829528 163829557 -39255975 + AT_rich Low_complexity Low_complexity 1 29 0 427 289 140 6 chr5 163829888 163830067 -39255465 + MIR SINE MIR 19 220 -42 449 237 26 111 chr5 163831049 163831239 -39254293 - MIR SINE MIR -11 251 78 455 326 31 10 chr5 163831325 163831521 -39254011 - MIR SINE MIR -32 230 31 1041 292 12 18 chr5 163831924 163832266 -39253266 + HAL1 LINE L1 15 354 -2153 341 292 26 9 chr5 163832267 163832380 -39253152 + HAL1 LINE L1 391 505 -2002 2139 222 77 87 chr5 163832526 163832582 -39252950 + Zaphod DNA AcHobo 20 75 -3956 198 71 0 0 chr5 163832582 163832610 -39252922 + (CA)n Simple_repeat Simple_repeat 2 29 0 2139 222 77 87 chr5 163832610 163833529 -39252003 + Zaphod DNA AcHobo 75 985 -3046 1049 229 57 19 chr5 163833531 163833897 -39251635 + Zaphod DNA AcHobo 3594 3973 -58 477 317 154 4 chr5 163836498 163836725 -39248807 - MIR SINE MIR 0 262 2 509 279 84 11 chr5 163836909 163837088 -39248444 + MIR SINE MIR 70 261 -1 302 278 51 5 chr5 163837956 163838092 -39247440 - MLT1I LTR MaLR -33 376 244 431 238 38 9 chr5 163838243 163838348 -39247184 + MER45A DNA AcHobo 70 177 -1 3772 136 19 42 chr5 163838784 163838947 -39246585 - L1MA7 LINE L1 0 6291 6126 1731 179 10 26 chr5 163838947 163839249 -39246283 + AluJb SINE Alu 3 299 -13 3772 136 19 42 chr5 163839249 163839805 -39245727 - L1MA7 LINE L1 -165 6126 5588 720 153 19 13 chr5 163839807 163839964 -39245568 + L1 LINE L1 4540 4697 -1449 254 267 17 17 chr5 163839965 163840025 -39245507 - MER5A DNA MER1_type -118 71 12 202 220 174 92 chr5 163841005 163841114 -39244418 - MIR SINE MIR -61 147 30 24 96 0 0 chr5 163841434 163841507 -39244025 + AT_rich Low_complexity Low_complexity 1 73 0 2461 59 3 7 chr5 163841942 163842248 -39243284 - AluSc SINE Alu -4 305 1 414 0 0 0 chr5 163842426 163842472 -39243060 + (TG)n Simple_repeat Simple_repeat 2 47 0 636 109 80 22 chr5 163842666 163842803 -39242729 + L1MA9 LINE L1 6162 6306 -6 1910 201 84 34 chr5 163842810 163843308 -39242224 - MER63C DNA MER1_type -155 775 253 793 273 77 66 chr5 163844332 163844724 -39240808 + LTR33A LTR ERVL 2 397 -126 184 379 0 0 chr5 163844837 163844895 -39240637 - L2 LINE L2 -11 3261 3204 224 229 21 0 chr5 163844901 163844949 -39240583 - MIR SINE MIR -99 163 115 2577 166 126 34 chr5 163845421 163846149 -39239383 - LTR1B LTR ERV1 -2 783 1 1961 122 0 34 chr5 163846269 163846605 -39238927 + AluSx SINE Alu 1 326 0 1915 18 0 14 chr5 163847148 163847368 -39238164 - AluYa5 SINE Alu -14 297 81 472 352 73 0 chr5 163847767 163848000 -39237532 - MIR SINE MIR -2 260 11 257 314 83 8 chr5 163849494 163849615 -39235917 - L2 LINE L2 -13 3300 3171 1071 68 0 3 chr5 163849641 163849893 -39235639 + AluSc SINE Alu 1 317 0 484 329 57 36 chr5 163850030 163850331 -39235201 - L2 LINE L2 -338 2976 2670 4206 128 9 3 chr5 163850347 163850987 -39234545 - L1PA15 LINE L1 -14 6151 5508 532 240 20 20 chr5 163851550 163851700 -39233832 - MIR SINE MIR -15 247 98 220 378 35 28 chr5 163852431 163852574 -39232958 - MIR SINE MIR -81 181 38 1117 237 159 88 chr5 163852879 163852897 -39232635 + L1M4 LINE L1 4528 4543 -1603 1682 186 14 3 chr5 163852897 163853182 -39232350 - AluJo SINE Alu -24 288 1 1117 237 159 88 chr5 163853182 163853822 -39231710 + L1M4 LINE L1 4543 5233 -913 423 214 0 11 chr5 163853865 163853954 -39231578 + Ricksha DNA DNA 16 103 -1151 1674 251 60 17 chr5 163853961 163854657 -39230875 - L1M1 LINE L1 -3465 4100 3386 30622 120 12 57 chr5 163854663 163861104 -39224428 - L1PA7 LINE L1 -8 6146 12 2066 270 53 68 chr5 163861123 163862379 -39223153 - L1M4c LINE L1 -4174 3392 2153 644 217 34 14 chr5 163862425 163862632 -39222900 + L1 LINE L1 2839 3049 -3097 5127 24 0 0 chr5 163862641 163863517 -39222015 - L1PA3 LINE L1 -494 5661 4786 4027 32 0 0 chr5 163863517 163864005 -39221527 + L1PA3 LINE L1 5668 6159 0 685 199 34 0 chr5 163864006 163864212 -39221320 + L1 LINE L1 3052 3264 -2882 1899 183 40 45 chr5 163864218 163864562 -39220970 - MER21B LTR ERV1 -90 828 484 315 0 0 0 chr5 163864562 163864597 -39220935 + (TA)n Simple_repeat Simple_repeat 1 35 0 279 79 0 0 chr5 163864599 163864637 -39220895 + (CA)n Simple_repeat Simple_repeat 1 38 0 1899 183 40 45 chr5 163864637 163864771 -39220761 - MER21B LTR ERV1 -435 483 399 337 210 12 0 chr5 163864776 163864857 -39220675 + L1MA9 LINE L1 6227 6308 -4 223 299 56 56 chr5 163865609 163865716 -39219816 - MIR SINE MIR -147 115 9 10221 208 31 98 chr5 163865995 163867349 -39218183 + L1M2 LINE L1 2 1445 -5403 1758 158 21 0 chr5 163867349 163867628 -39217904 + AluJb SINE Alu 1 285 -27 321 26 0 0 chr5 163867628 163867666 -39217866 + (TA)n Simple_repeat Simple_repeat 2 39 0 10221 208 31 98 chr5 163867666 163868280 -39217252 + L1M2 LINE L1 1444 2097 -4751 923 126 7 0 chr5 163868280 163868415 -39217117 + AluSg/x SINE Alu 158 293 -19 10221 208 31 98 chr5 163868415 163869450 -39216082 + L1M2 LINE L1 2097 2930 -3918 680 210 0 17 chr5 163869440 163869616 -39215916 - L1M2 LINE L1 -5028 1821 1649 * 6847 209 20 11 chr5 163869625 163871275 -39214257 + L1M2 LINE L1 2935 4598 -2250 413 288 121 47 chr5 163871307 163871794 -39213738 - L1MC/D LINE L1 -2024 5784 5262 481 323 32 11 chr5 163872881 163873067 -39212465 + MIR3 SINE MIR 8 197 -11 231 88 0 0 chr5 163874600 163874634 -39210898 + L1MC2 LINE L1 6042 6075 -269 * 514 182 16 8 chr5 163874632 163874753 -39210779 + L1MC3 LINE L1 7664 7785 0 208 320 84 78 chr5 163875139 163875423 -39210109 + L2 LINE L2 2346 2631 -683 4205 159 24 10 chr5 163875457 163876249 -39209283 + Ricksha DNA DNA 2441 3243 -8 199 219 0 0 chr5 163876774 163876815 -39208717 - L2 LINE L2 -4 3309 3269 311 328 160 0 chr5 163876895 163877014 -39208518 + MIR SINE MIR 12 149 -113 701 277 49 9 chr5 163877818 163878042 -39207490 - MIR SINE MIR -1 261 29 2607 120 3 0 chr5 163878076 163878450 -39207082 - THE1C LTR MaLR 0 375 1 9703 140 28 9 chr5 163878450 163880000 -39205532 - THE1C-int LTR MaLR 0 1580 1 2539 114 3 34 chr5 163880000 163880045 -39205487 - THE1C LTR MaLR 0 375 330 1741 148 21 39 chr5 163880045 163880357 -39205175 + AluSx SINE Alu 5 311 0 2539 114 3 34 chr5 163880357 163880697 -39204835 - THE1C LTR MaLR -45 330 1 457 324 95 22 chr5 163882535 163882779 -39202753 + MIR SINE MIR 4 262 0 23 33 0 0 chr5 163882769 163882799 -39202733 + AT_rich Low_complexity Low_complexity 1 30 0 * 35 63 0 0 chr5 163883180 163883243 -39202289 + AT_rich Low_complexity Low_complexity 1 63 0 4338 221 19 10 chr5 163883243 163884868 -39200664 - L1PA13 LINE L1 -3605 3192 1532 202 167 21 42 chr5 163885574 163885622 -39199910 + L3 LINE CR1 633 679 -898 382 339 41 98 chr5 163888596 163889036 -39196496 + L2 LINE L2 2857 3271 -1 278 291 139 35 chr5 163889279 163889451 -39196081 + L2 LINE L2 3124 3313 0 474 262 35 50 chr5 163891319 163891460 -39194072 + L2 LINE L2 3175 3313 0 1785 137 6 57 chr5 163891925 163892291 -39193241 + L1MA7 LINE L1 5945 6291 0 557 274 58 34 chr5 163893933 163894141 -39191391 + L2 LINE L2 2921 3133 -180 3963 180 47 2 chr5 163894148 163894948 -39190584 - L1MC1 LINE L1 0 6333 5469 446 294 12 44 chr5 163894956 163895116 -39190416 + L2 LINE L2 3156 3310 -3 2171 130 0 20 chr5 163895666 163896020 -39189512 - L1PA13 LINE L1 0 6163 5817 11305 122 29 6 chr5 163896029 163899724 -39185808 - L1PA8A LINE L1 -17 6429 2446 489 151 54 0 chr5 163899742 163899908 -39185624 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 402 53 79 53 chr5 163899915 163900149 -39185383 + (TA)n Simple_repeat Simple_repeat 1 240 0 395 158 61 0 chr5 163900157 163900322 -39185210 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 525 147 49 8 chr5 163900342 163900837 -39184695 + (TATAA)n Simple_repeat Simple_repeat 1 515 0 5551 196 10 27 chr5 163900839 163902794 -39182738 - L1PA8A LINE L1 -3991 2470 490 * 12721 210 64 15 chr5 163902792 163907307 -39178225 - L1PA13 LINE L1 -2026 4771 1 336 359 36 36 chr5 163908102 163908245 -39177287 + L1ME2 LINE L1 244 389 -5681 500 111 0 12 chr5 163908245 163908326 -39177206 + MADE1 DNA Mariner 1 80 0 336 359 36 36 chr5 163908326 163908405 -39177127 + L1ME2 LINE L1 388 466 -5604 534 288 56 33 chr5 163908635 163909285 -39176247 + L1ME2 LINE L1 525 1233 -4985 497 274 95 21 chr5 163909288 163909573 -39175959 + L1ME2 LINE L1 1272 1577 -4684 527 122 0 0 chr5 163909574 163909648 -39175884 - L1PA15-16 LINE L1 -4160 2689 2616 523 133 0 11 chr5 163909648 163909738 -39175794 + L1PA16 LINE L1 6069 6157 -9 785 208 60 35 chr5 163909747 163910031 -39175501 + L1M4 LINE L1 4386 4676 -1470 227 279 15 0 chr5 163910042 163910110 -39175422 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 309 169 0 0 chr5 163910112 163910171 -39175361 + (CATA)n Simple_repeat Simple_repeat 1 59 0 265 210 0 16 chr5 163910196 163910258 -39175274 - MER4-int LTR ERV1 -5436 1162 1102 966 254 12 44 chr5 163910333 163910671 -39174861 + L1M4 LINE L1 4787 5113 -1033 258 105 0 0 chr5 163910681 163910719 -39174813 + (CA)n Simple_repeat Simple_repeat 1 38 0 301 206 29 15 chr5 163910729 163910797 -39174735 + L1ME2 LINE L1 1650 1718 -4362 1889 248 77 20 chr5 163910808 163911438 -39174094 + L1ME2 LINE L1 5197 5912 -186 2267 166 29 2 chr5 163911438 163911854 -39173678 - MSTA LTR MaLR -1 427 1 1889 248 77 20 chr5 163911854 163912043 -39173489 + L1ME2 LINE L1 5912 6089 -9 24 53 0 0 chr5 163912048 163912086 -39173446 + AT_rich Low_complexity Low_complexity 1 38 0 243 281 0 0 chr5 163912091 163912155 -39173377 + MER103 DNA DNA 24 87 -79 2069 158 24 24 chr5 163912763 163912872 -39172660 + THE1C LTR MaLR 3 111 -264 2563 113 3 18 chr5 163912872 163913253 -39172279 - THE1C LTR MaLR 0 375 1 2069 158 24 24 chr5 163913253 163913516 -39172016 + THE1C LTR MaLR 110 375 0 217 330 27 27 chr5 163914221 163914333 -39171199 - MIR SINE MIR -58 150 39 1862 164 20 0 chr5 163914515 163914819 -39170713 + AluJo SINE Alu 1 310 -2 877 327 51 45 chr5 163915413 163915939 -39169593 + L2 LINE L2 2770 3309 -4 517 307 135 53 chr5 163916818 163917137 -39168395 - L2 LINE L2 0 3272 2928 2354 130 36 0 chr5 163917137 163917499 -39168033 - THE1C LTR MaLR 0 375 1 8928 126 76 30 chr5 163917499 163919010 -39166522 - THE1C-int LTR MaLR 0 1580 1 2481 125 16 0 chr5 163919010 163919379 -39166153 - THE1C LTR MaLR 0 375 1 319 179 13 13 chr5 163919538 163919616 -39165916 + GA-rich Low_complexity Low_complexity 4 81 0 1925 168 14 58 chr5 163920256 163920673 -39164859 - MER57A LTR ERV1 -2 401 3 5234 36 2 3 chr5 163920827 163921459 -39164073 + L1PA4 LINE L1 5522 6152 -3 216 312 0 13 chr5 163921543 163921620 -39163912 - MIR SINE MIR -59 203 128 260 328 75 59 chr5 163921620 163921806 -39163726 + MIR SINE MIR 2 190 -18 392 291 110 0 chr5 163921930 163922057 -39163475 - MIR SINE MIR -2 260 120 209 261 333 7 chr5 163922642 163922780 -39162752 + MIR3 SINE MIR 17 199 -9 510 225 56 28 chr5 163923322 163923464 -39162068 + MER58C DNA MER1_type 70 215 0 801 355 83 19 chr5 163925461 163925940 -39159592 - L2 LINE L2 0 3313 2804 23 0 0 0 chr5 163926203 163926226 -39159306 + AT_rich Low_complexity Low_complexity 1 23 0 1870 153 51 26 chr5 163926538 163926890 -39158642 - THE1B LTR MaLR -3 361 1 354 26 2 0 chr5 163928151 163928198 -39157334 + L1MB1 LINE L1 6126 6167 -1 237 278 103 10 chr5 163928297 163928394 -39157138 - MIR SINE MIR 0 262 157 475 300 29 43 chr5 163929404 163929614 -39155918 + MIR SINE MIR 31 237 -25 840 159 0 29 chr5 163930124 163930262 -39155270 + AluJo SINE Alu 2 135 -177 568 314 33 9 chr5 163930490 163930700 -39154832 - MIR SINE MIR -22 240 26 426 318 110 12 chr5 163931292 163931465 -39154067 - L2 LINE L2 0 3272 3083 345 247 47 12 chr5 163931487 163931572 -39153960 + MIR SINE MIR 104 191 -71 22 0 0 0 chr5 163931917 163931939 -39153593 + AT_rich Low_complexity Low_complexity 1 22 0 280 178 41 0 chr5 163932026 163932099 -39153433 - MER67C LTR ERV1 0 710 635 * 511 190 264 0 chr5 163932098 163932219 -39153313 - MER67C LTR ERV1 -176 534 382 657 133 0 0 chr5 163932220 163932318 -39153214 - MSTA LTR MaLR 0 426 329 567 96 117 0 chr5 163932320 163932414 -39153118 - L1MA8 LINE L1 -342 5949 5845 2067 151 6 37 chr5 163932417 163932568 -39152964 - MSTA LTR MaLR -87 341 187 2217 115 3 0 chr5 163932568 163932872 -39152660 - AluY SINE Alu -6 305 1 2067 151 6 37 chr5 163932872 163933072 -39152460 - MSTA LTR MaLR -241 187 1 1191 176 64 38 chr5 163933072 163933338 -39152194 - MER67C LTR ERV1 -325 385 113 285 116 43 58 chr5 163933361 163933430 -39152102 - L1MA8 LINE L1 -18 6273 6206 * 14862 140 39 32 chr5 163933420 163936494 -39149038 + L1PA11 LINE L1 1 3106 -3756 955 114 0 0 chr5 163936497 163936629 -39148903 + AluYb8 SINE Alu 1 132 -186 235 224 0 0 chr5 163936630 163936688 -39148844 + L1 LINE L1 3098 3155 -3707 * 2407 211 5 10 chr5 163936683 163937276 -39148256 + L1 LINE L1 4649 5238 -908 1884 141 76 20 chr5 163937277 163937632 -39147900 - THE1C LTR MaLR 0 375 1 8539 139 36 49 chr5 163937632 163937937 -39147595 - THE1B-int LTR MaLR 0 1580 1273 2104 117 57 26 chr5 163937937 163938289 -39147243 - THE1B LTR MaLR 0 364 2 8539 139 36 49 chr5 163938289 163939584 -39145948 - THE1B-int LTR MaLR -307 1273 1 1960 127 63 28 chr5 163939584 163939946 -39145586 - THE1C LTR MaLR 0 375 1 3007 104 36 7 chr5 163939946 163940474 -39145058 + L1P5 LINE L1 5235 5777 -374 333 0 0 0 chr5 163940474 163940511 -39145021 + (CA)n Simple_repeat Simple_repeat 2 38 0 1256 168 70 7 chr5 163940549 163940834 -39144698 - L1MA8 LINE L1 -279 6012 5710 441 174 55 18 chr5 163940834 163940943 -39144589 - MER67C LTR ERV1 -596 114 2 287 238 0 0 chr5 163941432 163941495 -39144037 + L2 LINE L2 3251 3313 0 1274 175 60 0 chr5 163941817 163942085 -39143447 + L1PA11 LINE L1 3320 3603 -3259 236 192 0 0 chr5 163942086 163942138 -39143394 + T-rich Low_complexity Low_complexity 1 52 0 7545 32 0 0 chr5 163942138 163943061 -39142471 - L1PA3 LINE L1 0 6155 5231 2712 21 0 0 chr5 163943061 163943400 -39142132 + L1P LINE L1 4929 5267 -879 * 10399 144 19 60 chr5 163943392 163945589 -39139943 + L1PA11 LINE L1 3592 5698 -1164 40737 32 23 2 chr5 163945589 163951605 -39133927 - L1PA2 LINE L1 -4 6151 2 4793 119 23 3 chr5 163951607 163952716 -39132816 + L1PA11 LINE L1 5688 6890 0 630 295 54 18 chr5 163953413 163953637 -39131895 - MIR SINE MIR 0 262 31 400 311 73 18 chr5 163954435 163954599 -39130933 - L2 LINE L2 -22 3291 3119 1996 141 0 0 chr5 163954809 163955115 -39130417 - AluSq SINE Alu 0 306 1 196 352 14 0 chr5 163955145 163955216 -39130316 - L3 LINE CR1 -8 1569 1498 2217 275 85 27 chr5 163955222 163955398 -39130134 - L2 LINE L2 0 3313 3149 1125 51 76 13 chr5 163955398 163955555 -39129977 + L1PA5 LINE L1 5988 6154 0 2217 275 85 27 chr5 163955555 163956484 -39129048 - L2 LINE L2 -164 3149 2135 1213 257 99 9 chr5 163956571 163956995 -39128537 + MLT1H LTR MaLR 88 549 0 317 275 105 15 chr5 163957141 163957306 -39128226 - MLT1I LTR MaLR -1 437 264 265 230 27 0 chr5 163957366 163957440 -39128092 - MLT1J2 LTR MaLR -304 146 71 677 259 53 6 chr5 163957568 163957738 -39127794 + MER45A DNA AcHobo 1 178 0 428 269 92 8 chr5 163957752 163957871 -39127661 + MER5B DNA MER1_type 2 130 -48 198 0 0 0 chr5 163957871 163957893 -39127639 + (T)n Simple_repeat Simple_repeat 1 22 0 455 152 9 9 chr5 163958144 163958249 -39127283 + L1MC4 LINE L1 6984 7088 -954 1821 196 43 7 chr5 163958250 163958668 -39126864 + L1MC4 LINE L1 7238 7670 -372 274 261 52 37 chr5 163958692 163958826 -39126706 + L1ME LINE L1 5644 5779 -342 21 36 0 0 chr5 163958887 163958915 -39126617 + AT_rich Low_complexity Low_complexity 1 28 0 848 256 234 8 chr5 163960170 163960811 -39124721 + LTR50 LTR ERVL 3 788 -7 250 300 79 38 chr5 163961725 163961900 -39123632 + MIR3 SINE MIR 13 189 -64 * 1032 283 82 26 chr5 163961896 163962323 -39123209 - L2 LINE L2 -15 3298 2848 317 339 85 24 chr5 163962627 163962792 -39122740 + MIR SINE MIR 2 176 -86 4397 126 40 6 chr5 163962796 163963580 -39121952 - L1PA15 LINE L1 -9 6156 5347 313 368 72 33 chr5 163963644 163963951 -39121581 + L2 LINE L2 2946 3264 -8 211 205 0 0 chr5 163965115 163965154 -39120378 + A-rich Low_complexity Low_complexity 1 39 0 951 32 0 0 chr5 163966058 163966181 -39119351 - L1P LINE L1 -941 5205 5083 21 36 0 0 chr5 163966181 163966209 -39119323 + AT_rich Low_complexity Low_complexity 1 28 0 251 329 0 0 chr5 163966284 163966354 -39119178 + Charlie8 DNA MER1_type 196 265 -2152 228 227 127 60 chr5 163967119 163967269 -39118263 + L1ME LINE L1 5630 5789 -332 900 214 87 0 chr5 163967331 163967527 -39118005 - MER58A DNA MER1_type 0 224 12 479 285 78 16 chr5 163967606 163967799 -39117733 - MIR SINE MIR 0 262 58 21 36 0 0 chr5 163968725 163968753 -39116779 + AT_rich Low_complexity Low_complexity 1 28 0 334 263 79 40 chr5 163969488 163969640 -39115892 - MIR SINE MIR -41 221 64 537 236 91 30 chr5 163969881 163970080 -39115452 + Charlie8 DNA MER1_type 76 286 -2131 195 353 201 7 chr5 163970262 163970551 -39114981 + L2 LINE L2 2396 2740 -574 566 317 70 56 chr5 163972221 163972647 -39112885 - LTR67 LTR ERVL -3 554 123 218 392 20 0 chr5 163972918 163973020 -39112512 + L2 LINE L2 3190 3293 -20 235 222 0 0 chr5 163973035 163973089 -39112443 - MLT1K LTR MaLR -123 465 412 6489 47 28 0 chr5 163973097 163973919 -39111613 - MER11D LTR ERVK -22 875 31 201 147 0 0 chr5 163974822 163974856 -39110676 + (CA)n Simple_repeat Simple_repeat 1 34 0 230 182 0 18 chr5 163976224 163976279 -39109253 + A-rich Low_complexity Low_complexity 3 56 0 397 335 105 15 chr5 163977728 163977928 -39107604 + MIR SINE MIR 16 233 -29 191 283 151 19 chr5 163977967 163978073 -39107459 - MIR SINE MIR -57 205 86 202 130 22 43 chr5 163978101 163978147 -39107385 + (TTA)n Simple_repeat Simple_repeat 3 47 0 220 304 152 3 chr5 163978262 163978421 -39107111 + MIR SINE MIR 45 221 -41 288 310 80 18 chr5 163979600 163979703 -39105829 + L2 LINE L2 3189 3301 -12 219 36 0 0 chr5 163979703 163979731 -39105801 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 163980295 163980316 -39105216 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 163980378 163980400 -39105132 + AT_rich Low_complexity Low_complexity 1 22 0 424 288 31 31 chr5 163980558 163980718 -39104814 - MER5A DNA MER1_type -1 188 29 2169 112 0 26 chr5 163980889 163981193 -39104339 + AluSq SINE Alu 1 296 -17 811 268 36 104 chr5 163981608 163982186 -39103346 - MLT1K LTR MaLR -4 584 46 233 182 18 0 chr5 163982363 163982418 -39103114 + GA-rich Low_complexity Low_complexity 3 58 0 192 298 21 0 chr5 163982520 163982567 -39102965 - L3 LINE CR1 -7 1570 1523 1015 182 64 21 chr5 163982670 163982793 -39102739 + MER33 DNA MER1_type 1 117 -2468 2173 106 3 19 chr5 163982793 163983104 -39102428 + AluSg SINE Alu 1 306 -4 1015 182 64 21 chr5 163983104 163983260 -39102272 + MER33 DNA MER1_type 117 292 -32 562 320 151 16 chr5 163983314 163983352 -39102180 + L2 LINE L2 2870 2902 -370 3458 119 25 14 chr5 163983352 163983871 -39101661 + LTR45 LTR ERV1 1 525 0 562 320 151 16 chr5 163983871 163984187 -39101345 + L2 LINE L2 2902 3269 -3 328 345 85 6 chr5 163984918 163985083 -39100449 + MIR SINE MIR 68 245 -17 359 268 127 45 chr5 163985905 163986186 -39099346 + L1ME4a LINE L1 5660 5989 -132 873 193 22 66 chr5 163986186 163986414 -39099118 + MER20 DNA MER1_type 2 219 0 359 268 127 45 chr5 163986414 163986557 -39098975 + L1ME4a LINE L1 5989 6119 -2 27 49 0 0 chr5 163987305 163987346 -39098186 + AT_rich Low_complexity Low_complexity 1 41 0 2240 98 7 3 chr5 163987533 163987828 -39097704 - AluSg SINE Alu -14 296 1 181 233 47 0 chr5 163988307 163988350 -39097182 - L2 LINE L2 0 3313 3269 * 501 243 136 11 chr5 163988343 163988520 -39097012 - MIR SINE MIR -62 200 2 279 336 70 39 chr5 163988967 163989020 -39096512 + MIR SINE MIR 51 101 -161 2280 96 0 7 chr5 163989020 163989321 -39096211 - AluY SINE Alu -12 299 1 279 336 70 39 chr5 163989321 163989395 -39096137 + MIR SINE MIR 101 182 -80 469 168 10 20 chr5 163989649 163989750 -39095782 + MLT1I LTR MaLR 310 409 0 621 347 97 18 chr5 163989752 163990207 -39095325 + L3 LINE CR1 568 1058 -519 992 278 158 7 chr5 163990258 163990700 -39094832 + LTR33 LTR ERVL 3 511 -10 1146 112 0 0 chr5 163990830 163991008 -39094524 + L1MA5A LINE L1 6116 6293 -4 403 348 72 14 chr5 163991024 163991303 -39094229 - L2 LINE L2 -145 3168 2874 296 374 40 23 chr5 163991302 163991476 -39094056 - L2 LINE L2 -761 2553 2377 * 2098 120 3 19 chr5 163991498 163991840 -39093692 + AluSq SINE Alu 1 313 0 7895 14 0 0 chr5 163992204 163993249 -39092283 - L1PA2 LINE L1 0 6155 5111 1016 24 0 0 chr5 163993249 163993375 -39092157 + L1P LINE L1 2320 2445 -3701 675 233 175 5 chr5 163993391 163993597 -39091935 + MIR SINE MIR 22 262 0 556 278 166 17 chr5 163993632 163993934 -39091598 - MLT1K LTR MaLR 0 588 242 2510 140 76 4 chr5 163993979 163994429 -39091103 - LTR1B LTR ERV1 -344 482 1 371 346 8 8 chr5 163994538 163994665 -39090867 + L2 LINE L2 3142 3268 -4 191 333 30 15 chr5 163996044 163996110 -39089422 + L2 LINE L2 2998 3064 -249 294 339 58 60 chr5 163996844 163997465 -39088067 + L2 LINE L2 2620 3259 -13 186 225 0 45 chr5 163997465 163997554 -39087978 + GA-rich Low_complexity Low_complexity 1 85 0 5546 61 6 7 chr5 163998208 163998931 -39086601 - L1PA7 LINE L1 -11 6458 5737 4139 31 0 0 chr5 163998931 163999443 -39086089 + L1P LINE L1 3908 4419 -1727 * 7119 70 32 0 chr5 163999441 164000517 -39085015 - L1PA7 LINE L1 -743 5718 4629 1577 103 0 0 chr5 164000512 164000736 -39084796 - L1PA7 LINE L1 -6237 224 1 * 222 305 49 12 chr5 164000739 164000821 -39084711 + L2 LINE L2 2755 2839 -475 254 244 23 81 chr5 164000993 164001079 -39084453 - MER5C DNA MER1_type -239 85 5 251 237 99 86 chr5 164001147 164001379 -39084153 + L2 LINE L2 2959 3193 -120 2421 136 10 10 chr5 164001585 164001997 -39083535 + THE1C-int LTR MaLR 1169 1580 0 2355 144 3 3 chr5 164001997 164002372 -39083160 + THE1C LTR MaLR 1 375 0 574 313 49 9 chr5 164002406 164002630 -39082902 + MIR SINE MIR 29 261 -1 866 268 31 56 chr5 164003364 164003756 -39081776 + L1MCc LINE L1 1128 1509 -4914 260 229 0 16 chr5 164003920 164003981 -39081551 + AluJ/FLAM SINE Alu 14 73 -229 1055 79 0 0 chr5 164004410 164004550 -39080982 + L1PA3 LINE L1 6013 6152 -3 509 295 51 51 chr5 164004742 164005057 -39080475 - MLT1K LTR MaLR 0 588 274 2020 138 0 14 chr5 164005457 164005754 -39079778 - AluSc SINE Alu -16 293 1 36 40 0 0 chr5 164005877 164005927 -39079605 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 164006158 164006179 -39079353 + AT_rich Low_complexity Low_complexity 1 21 0 1260 166 20 76 chr5 164006748 164007049 -39078483 - MER57A LTR ERV1 -117 286 3 4838 63 0 9 chr5 164007203 164007841 -39077691 + L1PA4 LINE L1 5522 6153 -2 289 137 0 0 chr5 164008137 164008188 -39077344 - MADE1 DNA Mariner 0 80 30 1717 260 107 20 chr5 164008598 164009144 -39076388 + MLT1E LTR MaLR 2 593 0 250 328 27 59 chr5 164009148 164009334 -39076198 - L2 LINE L2 -864 2450 2271 642 309 28 18 chr5 164010223 164010440 -39075092 - MIR SINE MIR -21 241 23 234 284 118 47 chr5 164010779 164010906 -39074626 + MIR SINE MIR 110 245 -17 225 260 0 0 chr5 164010956 164011033 -39074499 + (TA)n Simple_repeat Simple_repeat 1 77 0 342 331 29 23 chr5 164011075 164011250 -39074282 - MIR SINE MIR -74 188 13 274 318 67 6 chr5 164061356 164061535 -39023997 + LTR33A LTR ERVL 327 516 -7 250 300 79 38 chr5 164062449 164062624 -39022908 + MIR3 SINE MIR 13 189 -64 * 1032 283 82 26 chr5 164062620 164063047 -39022485 - L2 LINE L2 -15 3298 2848 317 339 85 24 chr5 164063351 164063516 -39022016 + MIR SINE MIR 2 176 -86 4397 126 40 6 chr5 164063520 164064304 -39021228 - L1PA15 LINE L1 -9 6156 5347 313 368 72 33 chr5 164064368 164064675 -39020857 + L2 LINE L2 2946 3264 -8 211 205 0 0 chr5 164065839 164065878 -39019654 + A-rich Low_complexity Low_complexity 1 39 0 537 236 91 30 chr5 164066797 164066996 -39018536 + MER102b DNA MER1_type 87 297 -44 198 339 208 14 chr5 164067178 164067467 -39018065 + L2 LINE L2 2396 2740 -574 350 367 7 0 chr5 164068452 164068591 -39016941 - L2 LINE L2 -22 3291 3152 3742 173 61 20 chr5 164068592 164069411 -39016121 + L1MA5A LINE L1 4533 5406 -894 225 0 0 0 chr5 164069411 164069436 -39016096 + (CA)n Simple_repeat Simple_repeat 2 26 0 3742 173 61 20 chr5 164069436 164069564 -39015968 + L1MA5A LINE L1 5406 5527 -773 2168 138 8 3 chr5 164069564 164069942 -39015590 + L1MA5A LINE L1 5914 6293 -4 403 348 72 14 chr5 164069958 164070237 -39015295 - L2 LINE L2 -145 3168 2874 314 402 23 6 chr5 164070236 164070410 -39015122 - L2 LINE L2 -761 2553 2377 * 2098 120 3 19 chr5 164070432 164070786 -39014746 + AluSq SINE Alu 1 313 0 7868 16 0 0 chr5 164071150 164072194 -39013338 - L1PA2 LINE L1 -1 6154 5111 1016 24 0 0 chr5 164072194 164072320 -39013212 + L1P LINE L1 2320 2445 -3701 675 233 175 5 chr5 164072336 164072542 -39012990 + MIR SINE MIR 22 262 0 556 278 166 17 chr5 164072577 164072879 -39012653 - MLT1K LTR MaLR 0 588 242 2489 142 76 4 chr5 164072924 164073374 -39012158 - LTR1B LTR ERV1 -344 482 1 371 346 8 8 chr5 164073483 164073610 -39011922 + L2 LINE L2 3142 3268 -4 191 333 30 15 chr5 164074989 164075055 -39010477 + L2 LINE L2 2998 3064 -249 304 338 58 60 chr5 164075789 164076410 -39009122 + L2 LINE L2 2620 3259 -13 186 225 0 45 chr5 164076410 164076499 -39009033 + GA-rich Low_complexity Low_complexity 1 85 0 5546 61 6 7 chr5 164077153 164077876 -39007656 - L1PA7 LINE L1 -11 6458 5737 4139 31 0 0 chr5 164077876 164078388 -39007144 + L1P LINE L1 3908 4419 -1727 * 7118 71 32 0 chr5 164078386 164079462 -39006070 - L1PA7 LINE L1 -743 5718 4629 1577 103 0 0 chr5 164079457 164079681 -39005851 - L1PA7 LINE L1 -6237 224 1 * 222 305 49 12 chr5 164079684 164079766 -39005766 + L2 LINE L2 2755 2839 -475 254 244 23 81 chr5 164079938 164080024 -39005508 - MER5C DNA MER1_type -239 85 5 251 237 99 86 chr5 164080092 164080324 -39005208 + L2 LINE L2 2959 3193 -120 202 326 45 0 chr5 164080391 164080480 -39005052 - MIR SINE MIR -86 176 84 186 333 31 42 chr5 164080551 164080647 -39004885 - MIR SINE MIR -74 134 40 328 345 85 6 chr5 164080877 164081042 -39004490 + MIR SINE MIR 68 245 -17 359 268 127 45 chr5 164081864 164082145 -39003387 + L1ME4a LINE L1 5660 5989 -132 873 193 22 66 chr5 164082145 164082373 -39003159 + MER20 DNA MER1_type 2 219 0 359 268 127 45 chr5 164082373 164082516 -39003016 + L1ME4a LINE L1 5989 6119 -2 27 49 0 0 chr5 164083264 164083305 -39002227 + AT_rich Low_complexity Low_complexity 1 41 0 2240 98 7 3 chr5 164083492 164083787 -39001745 - AluSg SINE Alu -14 296 1 181 233 47 0 chr5 164084266 164084309 -39001223 - L2 LINE L2 0 3313 3269 * 501 243 136 11 chr5 164084302 164084479 -39001053 - MIR SINE MIR -62 200 2 279 336 70 39 chr5 164084926 164084979 -39000553 + MIR SINE MIR 51 101 -161 2321 97 0 0 chr5 164084979 164085278 -39000254 - AluY SINE Alu -12 299 1 279 336 70 39 chr5 164085278 164085352 -39000180 + MIR SINE MIR 101 182 -80 469 168 10 20 chr5 164085606 164085707 -38999825 + MLT1I LTR MaLR 310 409 0 621 347 97 18 chr5 164085709 164086164 -38999368 + L3 LINE CR1 568 1058 -519 1038 283 152 7 chr5 164086215 164086668 -38998864 + LTR33 LTR ERVL 3 521 0 26 50 0 0 chr5 164086676 164086716 -38998816 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 164087116 164087139 -38998393 + AT_rich Low_complexity Low_complexity 1 23 0 259 288 15 0 chr5 164087313 164087379 -38998153 + MIR SINE MIR 77 143 -119 397 335 105 15 chr5 164087860 164088060 -38997472 + MIR SINE MIR 16 233 -29 191 283 151 19 chr5 164088099 164088205 -38997327 - MIR SINE MIR -57 205 86 202 130 22 43 chr5 164088233 164088279 -38997253 + (TTA)n Simple_repeat Simple_repeat 3 47 0 220 304 152 3 chr5 164088394 164088553 -38996979 + MIR SINE MIR 45 221 -41 288 310 80 18 chr5 164089730 164089833 -38995699 + L2 LINE L2 3189 3301 -12 219 36 0 0 chr5 164089833 164089861 -38995671 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 164090425 164090446 -38995086 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 164090508 164090530 -38995002 + AT_rich Low_complexity Low_complexity 1 22 0 422 304 25 31 chr5 164090688 164090849 -38994683 - MER5A DNA MER1_type -1 188 29 2210 105 0 26 chr5 164091020 164091324 -38994208 + AluSq SINE Alu 1 296 -17 943 265 33 99 chr5 164091739 164092316 -38993216 - MLT1K LTR MaLR -4 584 46 233 182 18 0 chr5 164092493 164092548 -38992984 + GA-rich Low_complexity Low_complexity 3 58 0 192 298 21 0 chr5 164092650 164092697 -38992835 - L3 LINE CR1 -7 1570 1523 1015 182 64 21 chr5 164092800 164092923 -38992609 + MER33 DNA MER1_type 1 117 -2468 2173 106 3 19 chr5 164092923 164093234 -38992298 + AluSg SINE Alu 1 306 -4 1015 182 64 21 chr5 164093234 164093390 -38992142 + MER33 DNA MER1_type 117 292 -32 562 320 151 16 chr5 164093444 164093482 -38992050 + L2 LINE L2 2870 2902 -370 3482 118 25 14 chr5 164093482 164094001 -38991531 + LTR45 LTR ERV1 1 525 0 562 320 151 16 chr5 164094001 164094317 -38991215 + L2 LINE L2 2902 3269 -3 191 256 0 0 chr5 164095495 164095534 -38989998 + MIR SINE MIR 220 258 -4 342 171 0 0 chr5 164096264 164096334 -38989198 + GA-rich Low_complexity Low_complexity 3 72 0 497 308 81 55 chr5 164096631 164096975 -38988557 - MLT1J2 LTR MaLR -61 389 37 248 188 72 14 chr5 164097048 164097117 -38988415 + MIR SINE MIR 126 198 -64 3192 105 2 11 chr5 164097194 164097670 -38987862 - MER1A DNA MER1_type 0 529 58 202 254 0 63 chr5 164097693 164097756 -38987776 - MIR SINE MIR -77 185 127 856 278 29 7 chr5 164097757 164098038 -38987494 + MLT1H LTR MaLR 1 287 -262 231 274 0 82 chr5 164098235 164098308 -38987224 - MIR SINE MIR -137 125 59 199 304 33 87 chr5 164098347 164098439 -38987093 - MIR SINE MIR -169 93 7 323 287 35 0 chr5 164098544 164098631 -38986901 + L2 LINE L2 3179 3268 -4 310 286 78 122 chr5 164099583 164099978 -38985554 - L2 LINE L2 -26 3287 2910 361 299 136 6 chr5 164100886 164101063 -38984469 + L2 LINE L2 3114 3313 0 4355 14 0 4 chr5 164101405 164101906 -38983626 + L1PA2 LINE L1 5656 6154 -1 330 316 35 0 chr5 164102011 164102125 -38983407 + MER91B DNA MER1_type 12 129 -61 213 220 20 0 chr5 164102147 164102197 -38983335 + MER91B DNA MER1_type 94 144 -46 2268 97 3 0 chr5 164102496 164102794 -38982738 + AluY SINE Alu 1 299 -12 353 200 0 24 chr5 164103080 164103165 -38982367 + MLT1K LTR MaLR 503 585 -3 223 269 0 0 chr5 164103345 164103397 -38982135 + MIR SINE MIR 209 260 -2 293 233 39 39 chr5 164103774 164103903 -38981629 + LTR67 LTR ERVL 412 540 -17 425 331 29 0 chr5 164104059 164104240 -38981292 - MIR SINE MIR -52 210 18 475 231 100 93 chr5 164105345 164105635 -38979897 + MER102b DNA MER1_type 49 340 -1 21 0 0 0 chr5 164105793 164105814 -38979718 + AT_rich Low_complexity Low_complexity 1 21 0 1060 218 32 8 chr5 164105816 164106064 -38979468 - MLT1A1 LTR MaLR -46 319 66 5607 116 42 10 chr5 164106077 164107367 -38978165 - L1MA8 LINE L1 -6 6285 4957 1633 195 83 60 chr5 164107368 164107871 -38977661 - L1M3e LINE L1 -6509 521 7 228 246 0 18 chr5 164108332 164108389 -38977143 + CT-rich Low_complexity Low_complexity 1 56 0 408 328 83 26 chr5 164108679 164108908 -38976624 - MIR SINE MIR -19 243 2 207 368 59 22 chr5 164109450 164109586 -38975946 - MIR3 SINE MIR -63 145 5 495 292 157 0 chr5 164109688 164109866 -38975666 + L2 LINE L2 1773 1978 -1336 356 324 9 0 chr5 164110287 164110392 -38975140 + MIR SINE MIR 117 222 -40 757 302 65 29 chr5 164110880 164111188 -38974344 - L2 LINE L2 -956 2358 2040 521 286 202 14 chr5 164111198 164111485 -38974047 + LTR16B LTR ERVL 105 445 -19 1812 183 0 3 chr5 164111514 164111815 -38973717 - AluJo SINE Alu -12 300 1 226 228 53 18 chr5 164111925 164111982 -38973550 + L2 LINE L2 2692 2750 -564 300 269 234 0 chr5 164112875 164113020 -38972512 + L1ME LINE L1 5621 5799 -322 569 276 0 0 chr5 164113030 164113146 -38972386 + FLAM_A SINE Alu 1 116 -17 1795 113 3 138 chr5 164113151 164113529 -38972003 - AluSx SINE Alu 0 312 1 1301 199 0 0 chr5 164113683 164113909 -38971623 + AluJo SINE Alu 67 292 -20 2269 103 140 8 chr5 164114767 164115145 -38970387 + MSTA LTR MaLR 1 428 0 263 226 0 0 chr5 164115260 164115313 -38970219 - LTR67 LTR ERVL -4 553 501 2132 118 48 25 chr5 164116042 164116398 -38969134 + THE1B LTR MaLR 1 364 0 213 94 0 0 chr5 164116603 164116635 -38968897 + (TC)n Simple_repeat Simple_repeat 1 32 0 2627 147 24 0 chr5 164116686 164117102 -38968430 - MSTA LTR MaLR -2 426 1 497 342 25 12 chr5 164117225 164117386 -38968146 + L2 LINE L2 3108 3270 -2 547 281 158 9 chr5 164118106 164118334 -38967198 - MIR SINE MIR 0 262 1 323 229 105 0 chr5 164118334 164118439 -38967093 + MER103 DNA DNA 3 118 -48 365 296 126 7 chr5 164118637 164118772 -38966760 - MIR SINE MIR -110 152 2 555 256 29 29 chr5 164118852 164119024 -38966508 + MIR SINE MIR 77 248 -14 242 91 0 0 chr5 164119067 164119100 -38966432 - U2 snRNA snRNA -155 33 1 515 385 59 11 chr5 164119917 164120104 -38965428 - MER91A DNA MER1_type 0 196 1 * 680 304 100 57 chr5 164120104 164120265 -38965267 + L2 LINE L2 2595 2747 -567 3070 117 90 0 chr5 164120265 164120776 -38964756 + L1MB1 LINE L1 5607 6163 -5 680 304 100 57 chr5 164120776 164120956 -38964576 + L2 LINE L2 2747 2951 -363 259 263 17 34 chr5 164121254 164121372 -38964160 - MLT1H LTR MaLR -387 162 47 591 292 133 26 chr5 164121423 164121762 -38963770 + L2 LINE L2 2939 3313 0 187 250 0 0 chr5 164121962 164121998 -38963534 + MIR SINE MIR 114 149 -59 359 345 60 36 chr5 164122705 164122903 -38962629 + L1MC/D LINE L1 5458 5665 -2143 393 22 0 0 chr5 164122903 164122949 -38962583 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 359 345 60 36 chr5 164122949 164122999 -38962533 + L1MC/D LINE L1 5665 5712 -2096 46 0 0 0 chr5 164123190 164123236 -38962296 + AT_rich Low_complexity Low_complexity 1 46 0 288 342 248 10 chr5 164123833 164124035 -38961497 - MIR SINE MIR 0 262 13 207 303 28 55 chr5 164124359 164124468 -38961064 - MIR SINE MIR -71 191 86 226 299 104 0 chr5 164124473 164124550 -38960982 + MIR SINE MIR 96 180 -82 252 328 81 40 chr5 164124651 164124825 -38960707 + MIR SINE MIR 69 249 -13 182 331 8 66 chr5 164125951 164126072 -38959460 - MIR SINE MIR -40 222 109 288 330 9 52 chr5 164126274 164126504 -38959028 - MLT1J LTR MaLR -192 319 100 340 308 103 42 chr5 164126581 164126795 -38958737 - L2 LINE L2 -730 2584 2358 29211 116 40 16 chr5 164126812 164132834 -38952698 + L1PA7 LINE L1 12 6183 0 2238 108 0 0 chr5 164132853 164133149 -38952383 - AluSg SINE Alu -14 296 1 285 345 52 0 chr5 164133151 164133267 -38952265 - L2 LINE L2 -954 2360 2239 1073 229 5 0 chr5 164133346 164133560 -38951972 + MER20 DNA MER1_type 1 215 -4 26 30 0 0 chr5 164134451 164134484 -38951048 + AT_rich Low_complexity Low_complexity 1 33 0 400 307 107 41 chr5 164135054 164135513 -38950019 + L2 LINE L2 2825 3313 0 214 157 20 39 chr5 164136189 164136240 -38949292 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 180 0 0 0 chr5 164137048 164137068 -38948464 + (CA)n Simple_repeat Simple_repeat 2 21 0 372 143 0 0 chr5 164137068 164137140 -38948392 + (GA)n Simple_repeat Simple_repeat 1 72 0 560 156 9 0 chr5 164137409 164137518 -38948014 + GA-rich Low_complexity Low_complexity 3 112 0 748 246 108 39 chr5 164138079 164138440 -38947092 - MLT1B LTR MaLR -1 389 4 352 338 48 7 chr5 164139476 164139621 -38945911 + MIR SINE MIR 111 261 -1 503 330 55 10 chr5 164139721 164139921 -38945611 - MIR SINE MIR -44 218 10 590 298 119 8 chr5 164140741 164140976 -38944556 - MIR SINE MIR -1 261 1 377 306 48 24 chr5 164141123 164141332 -38944200 - L2 LINE L2 -474 2840 2627 1529 176 24 72 chr5 164141769 164142144 -38943388 + L1MD2 LINE L1 6002 6358 -1 683 283 44 28 chr5 164142291 164142542 -38942990 + MIR SINE MIR 7 261 -1 411 353 24 92 chr5 164142560 164143027 -38942505 + L2 LINE L2 2838 3272 0 333 0 0 0 chr5 164143342 164143379 -38942153 + (CA)n Simple_repeat Simple_repeat 2 38 0 234 0 0 0 chr5 164143378 164143404 -38942128 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 593 266 222 8 chr5 164144219 164144471 -38941061 - L2 LINE L2 0 3313 3008 252 272 281 9 chr5 164144722 164144836 -38940696 - MIR SINE MIR -97 165 21 277 372 47 26 chr5 164145020 164145254 -38940278 - L2 LINE L2 -190 3082 2844 766 284 29 0 chr5 164146522 164146726 -38938806 + MIR SINE MIR 47 256 -6 201 133 0 0 chr5 164146728 164146758 -38938774 + (CAT)n Simple_repeat Simple_repeat 1 30 0 331 285 186 29 chr5 164146793 164146965 -38938567 + MIR SINE MIR 14 212 -50 3867 160 31 6 chr5 164146981 164147713 -38937819 - L1MA9 LINE L1 -5 6307 5557 367 353 72 0 chr5 164148157 164148324 -38937208 - MIR SINE MIR -26 236 58 21 71 0 0 chr5 164148981 164149023 -38936509 + AT_rich Low_complexity Low_complexity 1 42 0 578 249 101 0 chr5 164150227 164150396 -38935136 + MIR SINE MIR 76 261 -1 470 337 90 60 chr5 164151963 164152662 -38932870 + L2 LINE L2 2550 3272 0 2163 82 0 54 chr5 164152826 164153143 -38932389 + AluY SINE Alu 2 301 -10 575 199 96 0 chr5 164153413 164153559 -38931973 + L1MC4 LINE L1 6459 6618 -1424 352 325 25 8 chr5 164153559 164153679 -38931853 - L2 LINE L2 -377 2936 2815 900 182 19 0 chr5 164153743 164153902 -38931630 + AluJo SINE Alu 121 282 -30 2013 78 0 0 chr5 164154487 164154769 -38930763 + AluSg SINE Alu 39 320 0 605 206 50 7 chr5 164154996 164155137 -38930395 - LTR33 LTR ERVL 0 521 375 379 273 128 0 chr5 164155204 164155376 -38930156 - LTR33 LTR ERVL -274 247 54 392 273 23 31 chr5 164156724 164156852 -38928680 + MIR SINE MIR 42 168 -94 235 335 254 20 chr5 164157072 164157681 -38927851 - L2 LINE L2 -571 2743 1992 300 346 22 38 chr5 164158502 164158687 -38926845 + MER5A DNA MER1_type 1 182 -7 203 261 22 0 chr5 164158722 164158768 -38926764 - L2 LINE L2 -16 3297 3251 2114 119 36 3 chr5 164159234 164159536 -38925996 + AluSx SINE Alu 1 312 0 380 335 126 47 chr5 164159650 164160491 -38925041 + L2 LINE L2 2395 3309 -4 713 230 143 19 chr5 164160982 164161191 -38924341 - MIR SINE MIR -25 237 3 282 284 199 6 chr5 164161390 164161566 -38923966 + MIR SINE MIR 10 219 -43 376 295 79 29 chr5 164162152 164162301 -38923231 + L1MC4a LINE L1 5552 5692 -2116 2410 63 3 3 chr5 164162301 164162600 -38922932 + AluY SINE Alu 1 299 -12 376 295 79 29 chr5 164162600 164162728 -38922804 + L1MC4a LINE L1 5692 5843 -1965 237 132 0 0 chr5 164163166 164163204 -38922328 + (GAA)n Simple_repeat Simple_repeat 2 39 0 2169 116 86 0 chr5 164163244 164163581 -38921951 - MER47A DNA MER2_type 0 366 1 414 301 81 0 chr5 164163618 164163741 -38921791 + L2 LINE L2 3137 3269 -3 741 193 42 6 chr5 164165249 164165415 -38920117 + L1MB7 LINE L1 5992 6163 -21 959 280 167 16 chr5 164166319 164166815 -38918717 + MLT1K LTR MaLR 18 588 0 326 333 50 35 chr5 164166816 164166957 -38918575 - MIR3 SINE MIR -47 161 19 1552 216 36 5 chr5 164166967 164167382 -38918150 + L1MA9 LINE L1 5856 6282 -30 488 303 137 31 chr5 164167562 164168070 -38917462 + L2 LINE L2 2738 3297 -16 1684 84 0 36 chr5 164168196 164168445 -38917087 - L1P3 LINE L1 -6221 240 1 470 288 210 48 chr5 164168935 164169415 -38916117 - MLT1K LTR MaLR -7 581 24 274 309 12 31 chr5 164169761 164169886 -38915646 + A-rich Low_complexity Low_complexity 1 124 -35 2254 123 0 0 chr5 164169886 164170187 -38915345 + AluSx SINE Alu 1 301 -11 274 309 12 31 chr5 164170187 164170223 -38915309 + A-rich Low_complexity Low_complexity 124 159 0 307 267 116 0 chr5 164170223 164170309 -38915223 + L1ME4a LINE L1 6008 6103 -18 1575 143 98 50 chr5 164170537 164170672 -38914860 + THE1C LTR MaLR 1 128 -247 414 0 0 0 chr5 164170672 164170718 -38914814 + (GTTTG)n Simple_repeat Simple_repeat 2 47 0 2077 141 0 0 chr5 164170718 164171001 -38914531 - AluSx SINE Alu -29 283 1 1575 143 98 50 chr5 164171001 164171222 -38914310 + THE1C LTR MaLR 127 375 0 287 226 0 0 chr5 164173067 164173120 -38912412 - L2 LINE L2 -11 3302 3250 1984 139 166 7 chr5 164173201 164173604 -38911928 - MLT1C LTR MaLR 0 467 1 1217 284 79 22 chr5 164173872 164174322 -38911210 + L2 LINE L2 2447 2919 -353 224 195 0 0 chr5 164174307 164174348 -38911184 + L2 LINE L2 3273 3313 0 * 337 314 12 0 chr5 164174461 164174547 -38910985 + MIR SINE MIR 37 123 -139 4084 174 47 36 chr5 164174547 164175024 -38910508 + MER4D LTR ERV1 2 495 -408 2345 103 0 3 chr5 164175024 164175336 -38910196 + AluY SINE Alu 1 311 0 4084 174 47 36 chr5 164175336 164175745 -38909787 + MER4D LTR ERV1 495 898 -5 314 228 119 20 chr5 164175756 164175857 -38909675 + MIR SINE MIR 152 262 0 3602 76 2 2 chr5 164176657 164177143 -38908389 - L1PA8 LINE L1 -2 6170 5685 1678 209 29 67 chr5 164177249 164177770 -38907762 + MLT1D LTR MaLR 5 505 0 1893 183 15 0 chr5 164177992 164178330 -38907202 + MER2 DNA MER2_type 1 343 -1 211 357 114 62 chr5 164179144 164179416 -38906116 + L2 LINE L2 2814 3099 -173 2146 184 19 5 chr5 164179426 164179849 -38905683 - L1MB7 LINE L1 -8 6176 5748 595 204 14 14 chr5 164179862 164180009 -38905523 + L1M3e LINE L1 10 156 -6874 1013 184 53 4 chr5 164180020 164180265 -38905267 + L1MA4 LINE L1 6022 6278 -22 1563 272 30 10 chr5 164180401 164180996 -38904536 + L1M3e LINE L1 1832 2438 -4599 186 376 50 20 chr5 164181106 164181207 -38904325 + L2 LINE L2 3112 3215 -57 488 316 78 26 chr5 164182068 164182299 -38903233 - MIR SINE MIR -13 249 7 301 346 19 9 chr5 164182309 164182416 -38903116 + MIR SINE MIR 37 144 -118 333 361 52 22 chr5 164184222 164184452 -38901080 + L2 LINE L2 2730 2966 -348 301 301 0 0 chr5 164185400 164185473 -38900059 + MIR SINE MIR 6 78 -184 1556 159 60 47 chr5 164185507 164185872 -38899660 - THE1C LTR MaLR 0 375 6 211 241 58 131 chr5 164185880 164185913 -38899619 + MIR SINE MIR 110 144 -118 12367 142 4 4 chr5 164185913 164188781 -38896751 + L1PA11 LINE L1 3280 6164 -10 211 241 58 131 chr5 164188781 164188884 -38896648 + MIR SINE MIR 144 236 -26 * 365 248 54 23 chr5 164188874 164189003 -38896529 + MIR SINE MIR 130 262 0 766 186 0 0 chr5 164189684 164189813 -38895719 + FLAM_C SINE Alu 1 129 -4 186 292 56 0 chr5 164189902 164189974 -38895558 + L2 LINE L2 3146 3221 -92 423 359 36 6 chr5 164190058 164190225 -38895307 - MIR3 SINE MIR -31 177 6 324 256 80 7 chr5 164192223 164192360 -38893172 - L1ME4a LINE L1 -1 6120 5974 422 328 67 23 chr5 164192472 164192948 -38892584 - L1ME4a LINE L1 -299 5822 5326 314 310 49 16 chr5 164193039 164193284 -38892248 - L1ME4a LINE L1 -1017 5129 4877 851 281 56 84 chr5 164193400 164193898 -38891634 + L2 LINE L2 2829 3312 -1 1965 168 0 0 chr5 164194337 164194635 -38890897 + AluJo SINE Alu 1 298 -14 1981 98 14 30 chr5 164195458 164195753 -38889779 + AluSg SINE Alu 1 290 -20 273 57 0 0 chr5 164195783 164195818 -38889714 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 71 0 0 chr5 164196057 164196113 -38889419 + AT_rich Low_complexity Low_complexity 1 56 0 1007 262 55 47 chr5 164196315 164196929 -38888603 + L1MC5 LINE L1 6414 6909 -899 771 244 106 43 chr5 164197025 164197516 -38888016 + L1MC5 LINE L1 7396 7917 -44 22 0 0 0 chr5 164197525 164197547 -38887985 + AT_rich Low_complexity Low_complexity 1 22 0 347 277 8 0 chr5 164197816 164197935 -38887597 + L1ME4a LINE L1 5633 5752 -369 301 280 112 0 chr5 164198033 164198140 -38887392 + L1ME4a LINE L1 5991 6109 -12 2261 105 23 3 chr5 164198168 164198473 -38887059 + AluSx SINE Alu 1 311 -1 360 0 0 0 chr5 164198485 164198525 -38887007 + (CA)n Simple_repeat Simple_repeat 2 41 0 237 222 19 0 chr5 164198825 164198879 -38886653 - L2 LINE L2 -4 3309 3255 851 140 34 84 chr5 164199265 164199443 -38886089 + AluJb SINE Alu 134 302 -10 203 263 0 18 chr5 164199462 164199519 -38886013 + GA-rich Low_complexity Low_complexity 4 59 0 329 194 42 0 chr5 164200836 164200908 -38884624 + MER116 DNA Mariner 1 75 -5 238 348 97 31 chr5 164201537 164201764 -38883768 - L2 LINE L2 -420 2894 2653 538 288 110 14 chr5 164201959 164202240 -38883292 - L2 LINE L2 -1 3312 3005 322 292 6 101 chr5 164203116 164203284 -38882248 + MER5A DNA MER1_type 16 167 -22 10733 225 18 20 chr5 164203556 164206676 -38878856 - L1PA15-16 LINE L1 -1993 5591 2469 454 328 23 31 chr5 164207350 164207701 -38877831 - L1PA15-16 LINE L1 -7227 354 7 203 182 39 13 chr5 164208251 164208328 -38877204 + (TA)n Simple_repeat Simple_repeat 1 79 0 1051 265 88 62 chr5 164208341 164208462 -38877070 + L1ME LINE L1 4177 4293 -1853 1989 151 0 0 chr5 164208462 164208753 -38876779 - AluSx SINE Alu -21 291 1 1051 265 88 62 chr5 164208753 164209740 -38875792 + L1ME LINE L1 4293 5314 -832 4531 121 13 37 chr5 164209754 164210572 -38874960 - L1PB1 LINE L1 -1 6866 6068 1842 28 0 0 chr5 164210586 164210803 -38874729 - L1PA5 LINE L1 -2 6152 5936 782 58 0 0 chr5 164210806 164210910 -38874622 + L1PA5 LINE L1 5850 5953 -201 * 5797 199 11 8 chr5 164210904 164212218 -38873314 - L1PB1 LINE L1 -776 6086 4769 4404 137 50 7 chr5 164212217 164212608 -38872924 - L1PB1 LINE L1 -3520 3342 2969 * 2611 29 7 3 chr5 164212608 164212915 -38872617 - AluY SINE Alu -3 308 1 4404 137 50 7 chr5 164212915 164213678 -38871854 - L1PB1 LINE L1 -3893 2969 2141 7084 94 6 20 chr5 164213719 164214791 -38870741 - MER11C LTR ERVK -14 1057 1 4091 196 55 12 chr5 164214791 164215007 -38870525 - L1PB1 LINE L1 -4719 2144 1939 2331 108 3 9 chr5 164215007 164215322 -38870210 - AluSq SINE Alu 0 313 1 4091 196 55 12 chr5 164215322 164217018 -38868514 - L1PB1 LINE L1 -4924 1939 6 526 281 93 71 chr5 164217048 164217457 -38868075 + L1ME LINE L1 5315 5731 -438 1462 180 4 0 chr5 164217602 164217874 -38867658 + L1MC1 LINE L1 6061 6333 0 609 234 212 18 chr5 164217889 164218111 -38867421 + AluSg1 SINE Alu 12 276 -33 189 0 0 0 chr5 164218112 164218133 -38867399 + (CA)n Simple_repeat Simple_repeat 2 22 0 280 300 24 10 chr5 164218136 164218326 -38867206 + HAL1b LINE L1 430 552 -865 * 1958 172 98 29 chr5 164218316 164218880 -38866652 + L1MB8 LINE L1 5232 5835 -343 1677 186 25 35 chr5 164218880 164219277 -38866255 + L1MA5 LINE L1 5908 6300 0 1649 174 16 30 chr5 164219277 164219642 -38865890 + L1MB8 LINE L1 5811 6172 -6 33 0 0 0 chr5 164220258 164220291 -38865241 + AT_rich Low_complexity Low_complexity 1 33 0 2150 111 3 0 chr5 164220458 164220773 -38864759 + AluSg SINE Alu 1 310 0 441 156 0 0 chr5 164220884 164220961 -38864571 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 2645 256 41 19 chr5 164221058 164221807 -38863725 - MER21B LTR ERV1 -58 805 40 841 313 51 19 chr5 164221826 164222789 -38862743 + L1ME3A LINE L1 4934 5929 -241 4782 159 33 24 chr5 164223173 164224106 -38861426 + L1PB4 LINE L1 4844 5787 -369 2287 116 6 3 chr5 164224106 164224417 -38861115 + AluSx SINE Alu 1 312 0 4782 159 33 24 chr5 164224417 164224784 -38860748 + L1PB4 LINE L1 5787 6149 -7 503 290 141 76 chr5 164224791 164225187 -38860345 + L2 LINE L2 2530 2951 -363 2181 135 0 0 chr5 164225610 164225913 -38859619 - AluSx SINE Alu -9 303 1 540 231 12 52 chr5 164226854 164227027 -38858505 - MIR SINE MIR 0 262 97 486 139 0 0 chr5 164227412 164227498 -38858034 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 359 328 21 48 chr5 164228223 164228409 -38857123 + MIR SINE MIR 64 244 -18 249 315 59 25 chr5 164228662 164228802 -38856730 + MIR SINE MIR 55 198 -63 576 197 7 112 chr5 164228842 164228994 -38856538 + L2 LINE L2 3178 3313 0 2126 209 67 77 chr5 164229937 164230598 -38854934 + MLT1E1 LTR MaLR 1 654 0 447 284 85 108 chr5 164231453 164232100 -38853432 + L2 LINE L2 2614 3271 -1 192 324 14 14 chr5 164232480 164232551 -38852981 + L2 LINE L2 3168 3238 -75 24 32 0 0 chr5 164232595 164232626 -38852906 + AT_rich Low_complexity Low_complexity 1 31 0 258 351 164 10 chr5 164232698 164232906 -38852626 - MIR SINE MIR -2 260 21 698 254 50 18 chr5 164233389 164233609 -38851923 - MIR SINE MIR -34 228 2 542 311 78 33 chr5 164234481 164234725 -38850807 - MIR SINE MIR -2 260 6 2311 99 0 0 chr5 164235097 164235400 -38850132 - AluSx SINE Alu -9 303 1 267 254 0 0 chr5 164235438 164235501 -38850031 + (CTA)n Simple_repeat Simple_repeat 2 64 0 257 325 24 86 chr5 164235672 164235881 -38849651 + L2 LINE L2 3075 3270 -43 470 277 60 71 chr5 164237169 164237436 -38848096 + Charlie8 DNA MER1_type 165 428 -1989 1469 84 0 58 chr5 164237448 164237494 -38848038 + AluY SINE Alu 99 146 -165 2515 3 41 7 chr5 164237494 164237784 -38847748 + AluY SINE Alu 1 300 -11 1469 84 0 58 chr5 164237784 164237963 -38847569 + AluY SINE Alu 146 311 0 643 283 85 36 chr5 164238016 164238801 -38846731 + L1MC/D LINE L1 4698 5526 -747 30656 104 9 60 chr5 164238801 164245282 -38840250 - L1PA7 LINE L1 0 6154 12 42 0 0 0 chr5 164245681 164245723 -38839809 + AT_rich Low_complexity Low_complexity 1 42 0 246 317 68 12 chr5 164245796 164246045 -38839487 - L1MEc LINE L1 -4869 1441 1179 258 113 32 16 chr5 164246075 164246137 -38839395 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 668 206 0 7 chr5 164246169 164246305 -38839227 + MER47A DNA MER2_type 1 135 -231 920 162 69 49 chr5 164246423 164246627 -38838905 - MER2 DNA MER2_type -135 210 3 * 1407 160 0 4 chr5 164246627 164246863 -38838669 + MER47A DNA MER2_type 132 366 0 332 247 77 28 chr5 164246865 164247047 -38838485 - L1MEc LINE L1 -5040 1079 889 195 42 0 0 chr5 164247261 164247285 -38838247 + (TA)n Simple_repeat Simple_repeat 2 25 0 394 276 140 20 chr5 164247434 164247701 -38837831 + L1MEd LINE L1 605 838 -5281 1457 221 13 19 chr5 164247701 164248009 -38837523 + AluJo SINE Alu 6 311 -1 394 276 140 20 chr5 164248009 164248197 -38837335 + L1MEd LINE L1 838 1115 -5004 1151 317 21 8 chr5 164248589 164248977 -38836555 - LTR16C LTR ERVL -31 460 68 322 261 43 0 chr5 164249281 164249373 -38836159 + L1MEd LINE L1 718 813 -5306 23 33 0 0 chr5 164249480 164249510 -38836022 + AT_rich Low_complexity Low_complexity 1 30 0 370 268 60 53 chr5 164249514 164249646 -38835886 + L1MEd LINE L1 924 1054 -5065 1848 105 0 0 chr5 164249646 164249884 -38835648 + AluSq SINE Alu 52 289 -24 370 268 60 53 chr5 164249884 164250035 -38835497 + L1MEd LINE L1 1054 1209 -4910 629 326 105 28 chr5 164250045 164250475 -38835057 + L1MEd LINE L1 1259 1721 -4589 4729 129 27 41 chr5 164250914 164251981 -38833551 - L1PA15 LINE L1 0 6161 5171 230 247 49 37 chr5 164252128 164252209 -38833323 - L2 LINE L2 -1 3271 3190 791 295 81 34 chr5 164252277 164252572 -38832960 + L3 LINE CR1 1257 1565 -12 281 289 162 17 chr5 164252547 164252720 -38832812 + MIR SINE MIR 29 226 -36 * 2167 120 0 0 chr5 164253041 164253341 -38832191 - AluSx SINE Alu -12 300 1 456 19 0 0 chr5 164254830 164254883 -38830649 + (TA)n Simple_repeat Simple_repeat 2 54 0 39659 65 2 0 chr5 164255088 164261218 -38824314 + L1PA5 LINE L1 11 6151 -3 283 264 28 47 chr5 164261263 164261369 -38824163 + MIR SINE MIR 158 261 -1 2108 121 0 3 chr5 164261721 164262011 -38823521 + AluSg SINE Alu 12 300 -10 390 234 26 0 chr5 164262345 164262422 -38823110 - L2 LINE L2 -8 3264 3186 313 333 57 42 chr5 164262656 164262698 -38822834 - L2 LINE L2 -97 3216 3176 2512 156 19 14 chr5 164262698 164263122 -38822410 + MSTB LTR MaLR 1 426 0 313 333 57 42 chr5 164263122 164263343 -38822189 - L2 LINE L2 -137 3176 2949 241 280 0 0 chr5 164263732 164263782 -38821750 + L2 LINE L2 3215 3264 -8 234 326 141 16 chr5 164264298 164264482 -38821050 - MIR SINE MIR 0 262 56 215 205 0 0 chr5 164264496 164264535 -38820997 + MIR SINE MIR 3 41 -221 201 364 0 0 chr5 164265424 164265490 -38820042 - L2 LINE L2 -21 3292 3227 207 0 0 0 chr5 164265973 164265996 -38819536 + (A)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr5 164266145 164266174 -38819358 + AT_rich Low_complexity Low_complexity 1 29 0 2747 125 14 21 chr5 164266795 164267226 -38818306 + MSTC LTR MaLR 1 428 0 571 314 16 0 chr5 164267498 164267692 -38817840 - MER117 DNA MER1_type 0 197 1 568 311 43 14 chr5 164267967 164268176 -38817356 + MIR SINE MIR 8 222 -40 283 319 79 13 chr5 164268283 164268411 -38817121 + MIR SINE MIR 20 151 -61 282 332 134 11 chr5 164269952 164270139 -38815393 + L2 LINE L2 2826 3035 -237 229 194 48 0 chr5 164270210 164270272 -38815260 - MLT1K LTR MaLR -2 586 522 225 94 0 0 chr5 164270294 164270326 -38815206 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 345 276 45 8 chr5 164270330 164270464 -38815068 - MLT1K LTR MaLR -71 517 379 656 313 27 41 chr5 164270507 164270801 -38814731 - MLT1K LTR MaLR -288 300 11 837 238 52 29 chr5 164271709 164271919 -38813613 - MIR SINE MIR -40 222 8 419 289 39 8 chr5 164271947 164272075 -38813457 + MIR SINE MIR 23 154 -108 490 280 40 23 chr5 164272891 164273066 -38812466 - MIR SINE MIR -9 253 76 287 132 59 15 chr5 164273354 164273422 -38812110 - MLT1L LTR MaLR -361 254 184 475 293 125 64 chr5 164273767 164274359 -38811173 + L2 LINE L2 2576 3211 -102 2172 192 21 9 chr5 164274359 164274780 -38810752 - MSTB LTR MaLR 0 426 1 475 293 125 64 chr5 164274780 164274880 -38810652 + L2 LINE L2 3211 3304 -9 419 304 51 0 chr5 164275248 164275386 -38810146 + MIR SINE MIR 75 219 -43 453 277 14 7 chr5 164275950 164276091 -38809441 - MER117 DNA MER1_type -50 147 6 205 53 79 0 chr5 164277775 164277813 -38807719 + A-rich Low_complexity Low_complexity 4 44 0 414 297 78 78 chr5 164278167 164278473 -38807059 + L1MC/D LINE L1 4457 4765 -1381 1523 89 0 0 chr5 164278473 164278675 -38806857 - L1PA5 LINE L1 -6 6148 5947 414 297 78 78 chr5 164278675 164278755 -38806777 + L1MC/D LINE L1 4764 4843 -1303 24 0 0 0 chr5 164278785 164278809 -38806723 + AT_rich Low_complexity Low_complexity 1 24 0 331 281 17 0 chr5 164278833 164278965 -38806567 + L1P LINE L1 4887 5020 -1126 1730 165 42 11 chr5 164278968 164279253 -38806279 + AluSx SINE Alu 1 294 -18 22 35 0 0 chr5 164279410 164279439 -38806093 + AT_rich Low_complexity Low_complexity 1 29 0 1209 254 75 11 chr5 164279505 164279946 -38805586 + L1MC/D LINE L1 5305 5766 -735 452 200 86 0 chr5 164279947 164280052 -38805480 + MER58 DNA MER1_type 2 115 -100 233 152 0 22 chr5 164280058 164280104 -38805428 + MER58 DNA MER1_type 2374 2418 -2 2468 79 3 0 chr5 164280245 164280549 -38804983 + AluSp SINE Alu 1 305 -8 2102 101 0 4 chr5 164280572 164280849 -38804683 + AluSg SINE Alu 9 284 -26 1184 232 59 69 chr5 164280997 164281445 -38804087 + L1MC5 LINE L1 7250 7692 -269 2203 120 0 13 chr5 164281445 164281761 -38803771 - AluSx SINE Alu 0 312 1 1184 232 59 69 chr5 164281761 164281924 -38803608 + L1MC5 LINE L1 7692 7855 -106 423 85 0 0 chr5 164282138 164282197 -38803335 + Alu SINE Alu 1 59 -259 190 250 165 92 chr5 164283024 164283188 -38802344 + MIR SINE MIR 87 262 0 561 311 144 19 chr5 164283670 164283940 -38801592 + L2 LINE L2 3005 3308 -5 186 71 0 0 chr5 164284113 164284141 -38801391 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr5 164284175 164284204 -38801328 + AT_rich Low_complexity Low_complexity 1 29 0 362 352 34 23 chr5 164284390 164284566 -38800966 - MER5B DNA MER1_type 0 178 1 293 117 50 33 chr5 164285030 164285090 -38800442 + MLT1K LTR MaLR 511 571 -17 202 344 109 23 chr5 164285655 164285783 -38799749 + L2 LINE L2 3162 3300 -13 562 235 115 22 chr5 164285786 164285969 -38799563 + MIR SINE MIR 63 262 0 422 306 33 47 chr5 164287412 164287581 -38797951 + MIR SINE MIR 3 171 -37 1821 177 10 65 chr5 164287677 164288089 -38797443 - MLT1B LTR MaLR 0 390 2 668 234 135 18 chr5 164288810 164289032 -38796500 - MIR SINE MIR -14 248 1 528 303 179 29 chr5 164289288 164289784 -38795748 + L2 LINE L2 2461 3054 -218 340 294 34 17 chr5 164290528 164290647 -38794885 + L2 LINE L2 3189 3309 -4 22 35 0 0 chr5 164291145 164291174 -38794358 + AT_rich Low_complexity Low_complexity 1 29 0 267 286 33 22 chr5 164291547 164291638 -38793894 + MIR3 SINE MIR 2 93 -115 924 212 0 9 chr5 164291661 164291883 -38793649 + L1MC4 LINE L1 7505 7724 -318 246 282 64 13 chr5 164291918 164291996 -38793536 + L2 LINE L2 3178 3259 -54 281 273 182 12 chr5 164292111 164292276 -38793256 - MIR SINE MIR -47 215 23 345 388 105 10 chr5 164292764 164293058 -38792474 - L2 LINE L2 -92 3180 2859 1787 234 181 15 chr5 164293207 164293881 -38791651 - LTR50 LTR ERVL 0 795 10 1947 154 0 10 chr5 164294293 164294598 -38790934 - AluSx SINE Alu -9 303 2 249 241 35 35 chr5 164294670 164294757 -38790775 + MLT1K LTR MaLR 160 246 -342 249 273 58 36 chr5 164294905 164295044 -38790488 + MLT1K LTR MaLR 432 573 -15 361 292 38 48 chr5 164295172 164295381 -38790151 + L1ME4a LINE L1 5364 5570 -551 2115 88 25 0 chr5 164295730 164295854 -38789678 + AluY SINE Alu 1 120 -191 189 0 0 0 chr5 164295854 164295875 -38789657 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2115 88 25 0 chr5 164295875 164296034 -38789498 + AluY SINE Alu 120 291 -20 241 273 36 0 chr5 164296489 164296544 -38788988 + L2 LINE L2 3249 3305 -8 198 71 0 0 chr5 164296670 164296698 -38788834 + (CA)n Simple_repeat Simple_repeat 2 29 0 198 286 0 39 chr5 164297025 164297102 -38788430 + L2 LINE L2 1967 2040 -1274 1962 168 0 0 chr5 164297457 164297754 -38787778 - AluJb SINE Alu -15 297 1 25 49 0 33 chr5 164297756 164297793 -38787739 + AT_rich Low_complexity Low_complexity 1 37 -22 1620 204 0 17 chr5 164297793 164298087 -38787445 + AluJo SINE Alu 1 289 -23 25 49 0 33 chr5 164298087 164298110 -38787422 + AT_rich Low_complexity Low_complexity 37 59 0 317 288 59 17 chr5 164298113 164298231 -38787301 + L1ME4a LINE L1 5773 5895 -226 1001 230 27 47 chr5 164298253 164298510 -38787022 + MIR SINE MIR 11 262 0 309 232 168 68 chr5 164298513 164298703 -38786829 + L1ME4a LINE L1 5902 6110 -11 683 376 60 12 chr5 164299267 164299753 -38785779 - L2 LINE L2 0 3313 2805 1350 246 81 20 chr5 164299877 164300271 -38785261 - MLT1F LTR MaLR -119 423 6 226 288 0 0 chr5 164300316 164300396 -38785136 + (TA)n Simple_repeat Simple_repeat 1 80 0 204 205 0 0 chr5 164300420 164300459 -38785073 + MIR SINE MIR 209 247 -15 225 0 0 0 chr5 164300463 164300488 -38785044 + (T)n Simple_repeat Simple_repeat 1 25 0 192 125 0 0 chr5 164300697 164300729 -38784803 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1854 148 18 7 chr5 164300788 164301072 -38784460 - AluJb SINE Alu -25 287 1 24 0 0 0 chr5 164301337 164301361 -38784171 + AT_rich Low_complexity Low_complexity 1 24 0 353 235 59 0 chr5 164301361 164301446 -38784086 - L1MC4 LINE L1 -1339 6703 6614 415 251 228 6 chr5 164301563 164301734 -38783798 - MIR SINE MIR -29 233 25 860 242 14 5 chr5 164301742 164301961 -38783571 + MER58A DNA MER1_type 1 221 -3 199 236 55 18 chr5 164302486 164302541 -38782991 - L2 LINE L2 0 3272 3216 287 309 86 31 chr5 164302634 164302729 -38782803 - L2 LINE L2 -81 3232 3144 1769 170 5 52 chr5 164302729 164303021 -38782511 - MLT1A1 LTR MaLR 0 365 93 2244 99 0 0 chr5 164303021 164303335 -38782197 - AluSq SINE Alu 0 314 1 1769 170 5 52 chr5 164303335 164303424 -38782108 - MLT1A1 LTR MaLR -272 93 1 287 309 86 31 chr5 164303424 164303584 -38781948 - L2 LINE L2 -169 3144 2963 254 206 135 99 chr5 164303670 164303691 -38781841 - MIR SINE MIR -104 158 139 182 36 0 36 chr5 164303691 164303719 -38781813 + (CA)n Simple_repeat Simple_repeat 2 28 0 254 206 135 99 chr5 164303719 164303838 -38781694 - MIR SINE MIR -123 139 13 204 367 10 10 chr5 164304544 164304642 -38780890 + MIR SINE MIR 29 126 -136 24 0 0 0 chr5 164304757 164304781 -38780751 + AT_rich Low_complexity Low_complexity 1 24 0 415 284 150 0 chr5 164305440 164305567 -38779965 - MIR SINE MIR -101 161 16 2186 112 10 0 chr5 164306078 164306372 -38779160 + AluSp SINE Alu 1 297 -16 231 242 15 0 chr5 164306372 164306438 -38779094 + (TA)n Simple_repeat Simple_repeat 1 67 0 274 242 21 118 chr5 164306928 164307114 -38778418 - MLT1L LTR MaLR -324 291 124 2059 112 7 43 chr5 164309504 164309808 -38775724 - AluSg SINE Alu -17 293 1 1235 197 7 37 chr5 164309929 164310224 -38775308 - MER58B DNA MER1_type -2 339 54 288 0 0 0 chr5 164310248 164310280 -38775252 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 0 chr5 164311008 164311032 -38774500 + AT_rich Low_complexity Low_complexity 1 24 0 303 294 49 10 chr5 164311109 164311211 -38774321 - MIR SINE MIR -127 135 30 248 239 30 15 chr5 164311250 164311317 -38774215 + MER5A DNA MER1_type 45 112 -77 466 248 75 71 chr5 164311380 164311594 -38773938 - MIR SINE MIR -10 252 38 399 276 0 0 chr5 164312244 164312331 -38773201 + L2 LINE L2 3227 3313 0 568 236 57 29 chr5 164312631 164312771 -38772761 + MIR3 SINE MIR 60 203 -5 382 287 25 25 chr5 164314681 164314803 -38770729 + MIR3 SINE MIR 87 208 0 898 272 94 39 chr5 164314868 164315306 -38770226 - MLT1J LTR MaLR -49 462 1 727 307 42 21 chr5 164315506 164316018 -38769514 + L1MCc LINE L1 17 1088 -5335 1034 238 82 50 chr5 164316354 164316422 -38769110 + L1MCc LINE L1 1129 1193 -5697 1417 208 112 13 chr5 164316422 164316816 -38768716 - MER63B DNA MER1_type -3 433 1 1034 238 82 50 chr5 164316816 164317599 -38767933 + L1MCc LINE L1 1193 2003 -4887 642 108 11 40 chr5 164317660 164317836 -38767696 + (TA)n Simple_repeat Simple_repeat 1 171 0 342 84 17 59 chr5 164317872 164317991 -38767541 + (TA)n Simple_repeat Simple_repeat 1 114 0 292 193 6 175 chr5 164318115 164318281 -38767251 + L1M1 LINE L1 2809 2979 -4619 1900 299 75 45 chr5 164318972 164320233 -38765299 + L2 LINE L2 1886 3190 -123 1548 107 31 9 chr5 164320233 164320458 -38765074 - MER30 DNA MER1_type 0 230 1 1900 299 75 45 chr5 164320458 164320582 -38764950 + L2 LINE L2 3190 3309 -4 460 273 41 0 chr5 164321042 164321163 -38764369 - MIR SINE MIR 0 262 137 349 278 137 45 chr5 164321195 164321418 -38764114 + L1MC4a LINE L1 5683 5923 -414 1384 178 7 18 chr5 164321453 164321729 -38763803 + L1MB7 LINE L1 5896 6168 -16 263 217 9 38 chr5 164321949 164322055 -38763477 + A-rich Low_complexity Low_complexity 4 106 0 474 333 160 25 chr5 164322326 164322921 -38762611 + L1MC4 LINE L1 4498 5172 -974 213 39 0 0 chr5 164323401 164323427 -38762105 + (GA)n Simple_repeat Simple_repeat 1 26 0 192 179 0 0 chr5 164323427 164323466 -38762066 + (CATA)n Simple_repeat Simple_repeat 2 40 0 612 301 63 53 chr5 164324006 164324737 -38760795 + HAL1b LINE L1 116 853 -495 1576 175 124 50 chr5 164324758 164325243 -38760289 - Charlie1b DNA MER1_type -1 522 2 854 313 76 38 chr5 164325606 164326214 -38759318 + L1M1 LINE L1 3650 4280 -3285 1320 123 0 0 chr5 164326214 164326393 -38759139 - AluSg/x SINE Alu -22 288 110 2189 105 0 10 chr5 164326410 164326705 -38758827 - AluSx SINE Alu -20 292 1 303 307 54 31 chr5 164326707 164327131 -38758401 + L1M1 LINE L1 4811 5244 -2321 329 258 31 0 chr5 164327247 164327344 -38758188 - MLT1F LTR MaLR -428 114 15 2201 241 32 8 chr5 164327373 164327999 -38757533 + L1MC4 LINE L1 5254 5894 -1914 817 233 216 34 chr5 164328035 164328495 -38757037 + L1MC4 LINE L1 7301 7869 -173 222 105 0 0 chr5 164328495 164328533 -38756999 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 817 233 216 34 chr5 164328533 164328595 -38756937 + L1MC4 LINE L1 7869 7918 -124 202 57 94 0 chr5 164328598 164328651 -38756881 + (TA)n Simple_repeat Simple_repeat 1 58 0 1612 209 4 0 chr5 164328651 164328929 -38756603 - AluJb SINE Alu -33 279 1 225 344 30 43 chr5 164329112 164329342 -38756190 + L1ME LINE L1 5378 5604 -562 1391 181 65 73 chr5 164329355 164329725 -38755807 - MER67D LTR ERV1 -3 511 145 1537 162 78 37 chr5 164329786 164330082 -38755450 + AluJb SINE Alu 5 312 0 360 176 0 0 chr5 164330086 164330154 -38755378 + GA-rich Low_complexity Low_complexity 2 69 0 785 126 0 15 chr5 164330285 164330420 -38755112 - MER67D LTR ERV1 -381 133 1 227 215 15 0 chr5 164330446 164330511 -38755021 + (TAGA)n Simple_repeat Simple_repeat 2 67 0 231 283 18 53 chr5 164330515 164330628 -38754904 + L1P4 LINE L1 5683 5791 -375 234 205 0 0 chr5 164330800 164330839 -38754693 - MLT1I LTR MaLR -222 187 149 3800 78 88 40 chr5 164330856 164331436 -38754096 - LTR14B LTR ERVK 0 608 1 294 289 0 0 chr5 164331524 164331628 -38753904 - HERVKC4 LTR ERVK -69 5193 5090 * 452 316 11 6 chr5 164331627 164331804 -38753728 - HERVK3 LTR ERVK -655 6588 6411 266 98 255 0 chr5 164332125 164332176 -38753356 - HERVK3 LTR ERVK -7025 218 155 755 83 19 0 chr5 164332983 164333091 -38752441 - HERVK3 LTR ERVK -5734 211 102 1561 91 0 0 chr5 164333469 164333688 -38751844 - HERVK3 LTR ERVK -5726 219 1 3356 73 152 13 chr5 164333688 164334222 -38751310 - LTR14B LTR ERVK 0 608 1 447 278 0 16 chr5 164334225 164334351 -38751181 - MLT1I LTR MaLR -285 124 1 2358 141 32 64 chr5 164334574 164335076 -38750456 + LTR19A LTR ERV1 1 486 0 259 359 77 0 chr5 164335400 164335517 -38750015 + MIR SINE MIR 21 146 -62 846 226 5 42 chr5 164336349 164336566 -38748966 + MER3 DNA MER1_type 1 209 0 1423 149 4 61 chr5 164336957 164337218 -38748314 + AluJo SINE Alu 51 296 -16 1283 210 111 28 chr5 164337705 164338058 -38747474 + MLT1D LTR MaLR 1 382 -123 1071 146 0 30 chr5 164338058 164338222 -38747310 - FRAM SINE Alu -17 159 1 663 122 65 24 chr5 164338229 164338352 -38747180 + MLT1D LTR MaLR 378 505 0 457 251 190 6 chr5 164338614 164338777 -38746755 - MIR SINE MIR -4 258 66 2240 118 0 0 chr5 164338907 164339204 -38746328 + AluSg SINE Alu 1 297 -13 242 188 82 24 chr5 164339239 164339324 -38746208 - LTR33 LTR ERVL 0 521 432 431 248 66 7 chr5 164339614 164339751 -38745781 + MIR SINE MIR 69 213 -49 220 204 19 0 chr5 164340286 164340340 -38745192 - MIR SINE MIR -129 133 79 260 326 0 11 chr5 164340954 164341043 -38744489 + GA-rich Low_complexity Low_complexity 3 90 0 284 353 64 27 chr5 164341101 164341288 -38744244 - L2 LINE L2 -87 3185 2992 1929 208 112 49 chr5 164341337 164341933 -38743599 + L1MDa LINE L1 74 707 -5833 6603 188 79 24 chr5 164341936 164343166 -38742366 + L1MDa LINE L1 746 1907 -4633 2095 131 0 3 chr5 164343166 164343463 -38742069 + AluSg SINE Alu 1 296 -14 6603 188 79 24 chr5 164343463 164344208 -38741324 + L1MDa LINE L1 1907 2865 -3675 495 0 0 0 chr5 164344208 164344263 -38741269 + (TA)n Simple_repeat Simple_repeat 1 55 0 6603 188 79 24 chr5 164344263 164344518 -38741014 + L1MDa LINE L1 2865 3104 -3436 540 96 63 0 chr5 164344524 164344731 -38740801 + (TA)n Simple_repeat Simple_repeat 1 220 0 325 220 0 90 chr5 164344735 164344835 -38740697 - L1MC4 LINE L1 -1339 6703 6613 402 158 34 23 chr5 164344844 164345021 -38740511 + (TA)n Simple_repeat Simple_repeat 2 180 0 532 142 59 3 chr5 164345050 164345375 -38740157 + (TA)n Simple_repeat Simple_repeat 1 343 0 63 14 0 0 chr5 164345378 164345448 -38740084 + AT_rich Low_complexity Low_complexity 1 70 0 437 173 60 0 chr5 164345448 164345616 -38739916 + (TA)n Simple_repeat Simple_repeat 1 178 0 22 0 0 0 chr5 164345616 164345638 -38739894 + AT_rich Low_complexity Low_complexity 1 22 0 1257 217 72 21 chr5 164345773 164346160 -38739372 + L1MC4a LINE L1 7173 7579 -229 391 238 86 43 chr5 164346155 164346365 -38739167 + L1MC4 LINE L1 7685 7903 -139 * 241 192 0 0 chr5 164346369 164346421 -38739111 + L1MC4 LINE L1 7991 8042 0 236 214 72 21 chr5 164346593 164346698 -38738834 - MLT1E2 LTR MaLR 0 654 353 * 822 230 100 65 chr5 164346689 164347059 -38738473 - MLT1E2 LTR MaLR -243 383 1 263 324 46 37 chr5 164347227 164347335 -38738197 + L2 LINE L2 3164 3272 0 250 282 117 53 chr5 164347757 164348023 -38737509 - L1ME4a LINE L1 -40 6081 5799 252 354 18 35 chr5 164348481 164348594 -38736938 + MIR SINE MIR 52 139 -69 193 293 0 81 chr5 164348572 164348671 -38736861 - MIR SINE MIR 0 262 172 * 1501 205 0 48 chr5 164348999 164349311 -38736221 - AluJo SINE Alu -15 297 1 261 302 129 36 chr5 164349458 164349597 -38735935 - MIR SINE MIR -93 169 18 317 315 0 0 chr5 164349924 164350013 -38735519 - L1MC4 LINE L1 -1339 6703 6615 264 30 0 0 chr5 164350154 164350187 -38735345 + (CA)n Simple_repeat Simple_repeat 2 34 0 4517 151 20 9 chr5 164350364 164350482 -38735050 + L1MA6 LINE L1 5497 5612 -688 1646 166 85 18 chr5 164350482 164350765 -38734767 + AluSx SINE Alu 1 302 -10 4517 151 20 9 chr5 164350765 164351432 -38734100 + L1MA6 LINE L1 5612 6291 -9 2414 230 61 26 chr5 164351466 164351903 -38733629 + L1ME1 LINE L1 5021 5441 -725 2407 81 3 0 chr5 164351903 164352200 -38733332 - AluSp SINE Alu -15 298 1 2414 230 61 26 chr5 164352200 164352506 -38733026 + L1ME1 LINE L1 5441 5735 -431 2156 142 88 32 chr5 164352506 164352915 -38732617 - MSTB1 LTR MaLR 0 432 1 2414 230 61 26 chr5 164352915 164353219 -38732313 + L1ME1 LINE L1 5735 6105 -61 2178 106 0 26 chr5 164354132 164354435 -38731097 - AluY SINE Alu -16 295 1 1768 129 35 46 chr5 164355104 164355452 -38730080 - MLT2A1 LTR ERVL 0 444 101 3062 69 32 5 chr5 164355455 164355890 -38729642 - HERVL-A1 LTR ERVL -19 5635 5189 14271 49 1 8 chr5 164355990 164357925 -38727607 - L1P LINE L1 -2181 3965 2045 23391 74 9 1 chr5 164358195 164361301 -38724231 + HERVL LTR ERVL 1674 4803 -851 24456 135 17 13 chr5 164361408 164362529 -38723003 + L1PA8A LINE L1 1076 2191 -4255 2141 132 3 3 chr5 164362529 164362832 -38722700 + AluSq SINE Alu 1 303 -10 24456 135 17 13 chr5 164362832 164367056 -38718476 + L1PA8A LINE L1 2191 6444 -2 332 285 65 16 chr5 164367057 164367180 -38718352 + L1M4 LINE L1 3475 3603 -2543 6509 72 8 5 chr5 164367348 164368494 -38717038 + L1PA8A LINE L1 4973 6129 -2 332 285 65 16 chr5 164368495 164368618 -38716914 + L1M4 LINE L1 3475 3603 -2543 833 261 84 4 chr5 164368618 164368844 -38716688 - MIR SINE MIR -15 247 4 185 297 0 0 chr5 164369897 164369934 -38715598 - MIR SINE MIR -21 241 205 2395 88 0 0 chr5 164370088 164370383 -38715149 + AluSq SINE Alu 1 295 -18 543 195 40 92 chr5 164372219 164372393 -38713139 + MER5B DNA MER1_type 14 178 0 8015 119 42 2 chr5 164373047 164374294 -38711238 + HSMAR2 DNA Mariner 4 1301 -1 192 189 27 0 chr5 164374358 164374395 -38711137 + L2 LINE L2 3226 3263 -9 251 344 11 11 chr5 164375955 164376045 -38709487 + MER5A DNA MER1_type 98 187 -2 724 130 0 89 chr5 164376262 164376408 -38709124 + FLAM_C SINE Alu 1 133 0 362 256 124 7 chr5 164376650 164376787 -38708745 + Charlie8 DNA MER1_type 1 153 -2264 712 272 12 0 chr5 164376984 164377146 -38708386 - MER5B DNA MER1_type -14 164 1 2416 95 0 7 chr5 164377577 164377883 -38707649 - AluSg SINE Alu -6 304 1 489 335 41 18 chr5 164378064 164378282 -38707250 - MIR SINE MIR 0 262 40 188 287 93 62 chr5 164378304 164378433 -38707099 - MIR SINE MIR -65 197 65 25 0 0 0 chr5 164379062 164379087 -38706445 + AT_rich Low_complexity Low_complexity 1 25 0 787 222 101 0 chr5 164380172 164380370 -38705162 - MER58A DNA MER1_type -5 219 2 1275 181 0 14 chr5 164380920 164381141 -38704391 + AluJb SINE Alu 84 301 -11 984 171 34 0 chr5 164381508 164381684 -38703848 + MER5A DNA MER1_type 7 188 -1 219 154 58 39 chr5 164381940 164381992 -38703540 - L2 LINE L2 -8 3264 3212 2112 113 0 53 chr5 164382378 164382696 -38702836 + AluSg SINE Alu 1 301 -9 334 204 45 76 chr5 164382925 164383057 -38702475 - MER117 DNA MER1_type -18 179 52 206 311 27 0 chr5 164383811 164383885 -38701647 - MIR SINE MIR -110 152 77 777 259 15 15 chr5 164384074 164384271 -38701261 + LTR16A LTR ERVL 120 316 -134 451 269 28 14 chr5 164384382 164384523 -38701009 - MIR SINE MIR -75 187 45 289 328 30 22 chr5 164384834 164384968 -38700564 - MER5B DNA MER1_type -38 140 6 301 226 24 36 chr5 164385265 164385349 -38700183 + MIR SINE MIR 24 106 -102 2525 178 110 69 chr5 164385556 164386350 -38699182 + LTR1B LTR ERV1 1 826 0 2439 89 0 0 chr5 164386527 164386831 -38698701 + AluSc SINE Alu 1 304 -5 382 238 188 0 chr5 164386951 164387052 -38698480 - L2 LINE L2 -7 3306 3187 1682 170 58 0 chr5 164388503 164388832 -38696700 + Tigger3(Golem) DNA MER2_type 1 348 -2681 1360 160 64 32 chr5 164388847 164389097 -38696435 + AluJo SINE Alu 34 291 -21 4894 131 15 20 chr5 164389098 164389985 -38695547 + Tigger3b DNA MER2_type 341 1222 -9 2242 112 3 3 chr5 164390155 164390460 -38695072 + AluSp SINE Alu 1 305 -8 344 295 238 5 chr5 164390700 164390910 -38694622 - MIR SINE MIR -3 259 1 1371 208 106 19 chr5 164390969 164391329 -38694203 - MSTD LTR MaLR -5 391 1 190 234 43 0 chr5 164391733 164391780 -38693752 - L3b LINE CR1 -4 1579 1531 218 321 143 7 chr5 164392067 164392207 -38693325 - L3 LINE CR1 -56 1521 1363 656 271 79 10 chr5 164392702 164392908 -38692624 - MIR SINE MIR -13 249 30 190 242 132 44 chr5 164392940 164393031 -38692501 + MIR SINE MIR 110 208 -54 2019 152 0 0 chr5 164393540 164393837 -38691695 + AluSx SINE Alu 1 297 -15 2835 166 35 4 chr5 164394645 164395152 -38690380 + Tigger7 DNA MER2_type 4 526 -1961 564 141 11 0 chr5 164395145 164395237 -38690295 + Tigger7 DNA MER2_type 2399 2491 0 * 919 178 0 35 chr5 164395784 164395953 -38689579 - FRAM SINE Alu -3 163 1 466 241 71 43 chr5 164395987 164396128 -38689404 + MIR SINE MIR 8 152 -110 2662 210 120 48 chr5 164396128 164397121 -38688411 + MER52C LTR ERV1 1 1213 -65 1661 187 26 26 chr5 164397142 164397489 -38688043 + MER52A LTR ERV1 1409 1755 0 227 261 0 130 chr5 164397489 164397604 -38687928 + MIR SINE MIR 152 251 -11 269 200 0 0 chr5 164397744 164397794 -38687738 - L2 LINE L2 -1 3312 3263 584 259 131 12 chr5 164397896 164398216 -38687316 + L1ME4a LINE L1 5635 5992 -129 264 316 189 19 chr5 164398237 164398449 -38687083 - MIR SINE MIR -3 259 12 482 67 0 0 chr5 164398543 164398603 -38686929 + FLAM SINE Alu 63 122 -21 1963 100 59 0 chr5 164398613 164398884 -38686648 + AluSq SINE Alu 1 287 -26 733 226 70 5 chr5 164398888 164399074 -38686458 - MIR SINE MIR 0 262 65 21 0 0 0 chr5 164399129 164399150 -38686382 + AT_rich Low_complexity Low_complexity 1 21 0 426 129 0 48 chr5 164400131 164400255 -38685277 + (TA)n Simple_repeat Simple_repeat 1 118 0 353 135 10 125 chr5 164400260 164400364 -38685168 - L1MC4 LINE L1 -1339 6703 6612 896 267 53 32 chr5 164400857 164401104 -38684428 + MIR SINE MIR 11 262 0 26 50 0 0 chr5 164401254 164401294 -38684238 + AT_rich Low_complexity Low_complexity 1 40 0 303 303 132 20 chr5 164401457 164401609 -38683923 - MIR3 SINE MIR -7 201 33 1482 171 0 9 chr5 164402586 164402814 -38682718 + AluSx SINE Alu 5 230 -82 252 86 0 0 chr5 164402816 164402851 -38682681 + (A)n Simple_repeat Simple_repeat 1 35 0 180 219 0 0 chr5 164402865 164402897 -38682635 - MIR SINE MIR -168 94 63 25 0 0 0 chr5 164404292 164404317 -38681215 + AT_rich Low_complexity Low_complexity 1 25 0 265 197 0 0 chr5 164404694 164404755 -38680777 - L1M LINE L1 -868 5316 5256 1881 165 3 0 chr5 164404800 164405091 -38680441 - AluJb SINE Alu -18 294 3 1226 199 39 5 chr5 164405093 164405417 -38680115 + MER54A LTR ERVL 12 417 -484 339 201 5 0 chr5 164405429 164405507 -38680025 + MER54A LTR ERVL 711 900 -1 236 283 0 0 chr5 164405949 164406009 -38679523 + L2 LINE L2 3251 3310 -3 2708 149 27 2 chr5 164406170 164406653 -38678879 - L1MC1 LINE L1 -19 6314 5820 366 169 90 0 chr5 164406653 164406742 -38678790 - L1MC1 LINE L1 -851 5493 5397 342 274 0 0 chr5 164406885 164406969 -38678563 + MIR SINE MIR 70 153 -109 650 309 179 18 chr5 164407347 164407901 -38677631 - L3 LINE CR1 -509 1068 426 39 38 0 0 chr5 164408488 164408541 -38676991 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr5 164408604 164408625 -38676907 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr5 164408832 164408890 -38676642 + AT_rich Low_complexity Low_complexity 1 58 0 3497 53 40 0 chr5 164409113 164409586 -38675946 + PABL_B LTR ERV1 1 492 -175 2475 150 56 17 chr5 164410890 164411370 -38674162 + L1MC1 LINE L1 5431 5929 -404 1161 203 115 0 chr5 164411372 164411693 -38673839 + L1MC1 LINE L1 5976 6333 0 199 190 207 17 chr5 164411693 164411751 -38673781 + MIR SINE MIR 183 251 -11 292 237 154 32 chr5 164411821 164411977 -38673555 - L1ME LINE L1 -455 5666 5492 216 390 39 32 chr5 164412632 164412786 -38672746 + MIR3 SINE MIR 23 177 -31 4418 182 33 23 chr5 164412905 164413997 -38671535 + L1 LINE L1 4127 5229 -917 5415 169 20 32 chr5 164414098 164415183 -38670349 + L1P LINE L1 295 1366 -4780 2015 95 21 21 chr5 164415283 164415609 -38669923 - Tigger3b DNA MER2_type -565 666 341 1230 176 64 32 chr5 164415610 164415860 -38669672 - AluJo SINE Alu -21 291 34 1645 173 58 0 chr5 164415875 164416204 -38669328 - Tigger3b DNA MER2_type -883 348 1 278 179 89 98 chr5 164417489 164417612 -38667920 + MIR SINE MIR 122 243 -19 635 124 141 0 chr5 164418038 164418159 -38667373 - AluSp/q SINE Alu -1 312 175 503 222 0 28 chr5 164418576 164418720 -38666812 - MER50 LTR ERV1 -22 712 573 295 20 0 60 chr5 164418894 164418944 -38666588 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1352 241 24 63 chr5 164418947 164419457 -38666075 - L1MEc LINE L1 -4927 1469 991 2303 103 0 3 chr5 164419457 164419769 -38665763 - AluSq SINE Alu -2 311 1 1352 241 24 63 chr5 164419769 164419939 -38665593 - L1MEc LINE L1 -5405 991 816 180 77 0 0 chr5 164419939 164419965 -38665567 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2442 60 0 13 chr5 164419965 164420283 -38665249 - L1PA6 LINE L1 -18 6136 5823 1785 191 0 22 chr5 164420976 164421290 -38664242 + AluJb SINE Alu 1 307 -5 416 279 159 56 chr5 164421440 164421780 -38663752 + L2 LINE L2 2928 3302 -11 9174 54 13 12 chr5 164422007 164422189 -38663343 - L1P LINE L1 -1644 4502 4322 2360 80 0 29 chr5 164422189 164422502 -38663030 - AluY SINE Alu -7 304 1 9174 54 13 12 chr5 164422502 164423591 -38661941 - L1P LINE L1 -1824 4322 3230 674 254 162 16 chr5 164423803 164424118 -38661414 + MER57B LTR ERV1 74 434 0 204 328 35 0 chr5 164424245 164424303 -38661229 - L2 LINE L2 -45 3227 3168 839 266 37 14 chr5 164424308 164424526 -38661006 - MIR SINE MIR -6 256 34 475 193 0 0 chr5 164424797 164424880 -38660652 - AluJ/FLAM SINE Alu -229 83 1 213 241 150 38 chr5 164425256 164425389 -38660143 - L2 LINE L2 -808 2506 2359 307 341 54 6 chr5 164425444 164425611 -38659921 - MIR SINE MIR -68 194 20 679 142 0 252 chr5 164426031 164426348 -38659184 + L1MA7 LINE L1 3544 3780 -2366 5542 145 32 7 chr5 164426448 164427727 -38657805 + L1MA7 LINE L1 4916 6161 -130 279 0 0 0 chr5 164427727 164427758 -38657774 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 297 0 0 0 chr5 164427757 164427790 -38657742 + (TA)n Simple_repeat Simple_repeat 2 34 0 5542 145 32 7 chr5 164427758 164427851 -38657681 + L1MA7 LINE L1 6161 6291 0 834 147 74 0 chr5 164427887 164427935 -38657597 + L1M3 LINE L1 5588 5631 -552 234 0 0 0 chr5 164427935 164427961 -38657571 + (TA)n Simple_repeat Simple_repeat 1 26 0 834 147 74 0 chr5 164427961 164428075 -38657457 + L1M3 LINE L1 5631 5762 -421 1222 132 56 21 chr5 164428076 164428342 -38657190 - THE1B LTR MaLR -7 357 56 1134 124 0 0 chr5 164428561 164428730 -38656802 + L1PA6 LINE L1 10 178 -6283 * 15149 98 7 17 chr5 164428719 164431090 -38654442 + L1PA6 LINE L1 1041 3386 -3075 16832 75 0 1 chr5 164431190 164434266 -38651266 + L1PA6 LINE L1 3369 6469 0 465 221 43 7 chr5 164434281 164434421 -38651111 + L1ME4a LINE L1 5962 6106 -15 990 129 0 0 chr5 164434692 164434831 -38650701 + AluJb SINE Alu 1 139 -173 1437 239 214 4 chr5 164435578 164436068 -38649464 + MLT1E LTR MaLR 1 593 0 216 0 0 0 chr5 164436493 164436517 -38649015 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1730 166 14 7 chr5 164436899 164437188 -38648344 - AluJb SINE Alu -16 296 6 670 161 45 26 chr5 164437200 164437355 -38648177 + MER106B DNA MER1_type 902 1059 0 6647 138 30 7 chr5 164437966 164440054 -38645478 + L1MA7 LINE L1 4091 6129 -162 189 0 0 0 chr5 164440054 164440075 -38645457 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 225 0 0 0 chr5 164440074 164440099 -38645433 + (TA)n Simple_repeat Simple_repeat 1 25 0 6647 138 30 7 chr5 164440075 164440160 -38645372 + L1MA7 LINE L1 6129 6291 0 903 129 74 0 chr5 164440196 164440244 -38645288 + L1MB3 LINE L1 5588 5631 -552 180 0 0 0 chr5 164440244 164440264 -38645268 + (TA)n Simple_repeat Simple_repeat 1 20 0 903 129 74 0 chr5 164440264 164440378 -38645154 + L1MB3 LINE L1 5631 5762 -421 1324 113 70 23 chr5 164440379 164440667 -38644865 - THE1B LTR MaLR -7 357 27 2471 145 20 7 chr5 164440667 164441114 -38644418 + L1MB3 LINE L1 5729 6181 -2 755 303 65 4 chr5 164441543 164441774 -38643758 + MIR SINE MIR 18 262 0 253 338 0 12 chr5 164441943 164442023 -38643509 + L2 LINE L2 3186 3264 -8 239 262 12 36 chr5 164442232 164442316 -38643216 - MIR SINE MIR -100 162 81 246 214 36 0 chr5 164443665 164443721 -38641811 + MLT1K LTR MaLR 531 588 0 205 351 38 10 chr5 164443828 164443928 -38641604 + MIR SINE MIR 4 109 -114 * 276 266 16 0 chr5 164443926 164443990 -38641542 + L2 LINE L2 3207 3271 -1 986 192 62 22 chr5 164444234 164444458 -38641074 + MER58D DNA MER1_type 2 234 -152 499 245 70 0 chr5 164445331 164445474 -38640058 + MIR SINE MIR 110 262 0 600 321 16 5 chr5 164446153 164446340 -38639192 + MIR SINE MIR 74 262 0 630 287 64 61 chr5 164446525 164446853 -38638679 + L1M3d LINE L1 413 741 -5562 3229 188 30 77 chr5 164447032 164447780 -38637752 + L1M3d LINE L1 800 1452 -4851 5173 58 0 0 chr5 164447780 164448379 -38637153 + L1PA6 LINE L1 5547 6145 -9 3229 188 30 77 chr5 164448379 164448700 -38636832 + L1M3d LINE L1 1452 1787 -4516 326 349 83 15 chr5 164448733 164448865 -38636667 - L2 LINE L2 0 3272 3132 217 327 91 18 chr5 164449028 164449138 -38636394 - L2 LINE L2 -433 2881 2764 215 216 0 0 chr5 164449615 164449652 -38635880 + polypyrimidine Low_complexity Low_complexity 3 39 0 306 0 0 0 chr5 164449654 164449688 -38635844 + (CA)n Simple_repeat Simple_repeat 2 35 0 316 228 94 60 chr5 164450097 164450246 -38635286 - L3b LINE CR1 -102 1481 1328 309 183 0 0 chr5 164450318 164450378 -38635154 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 225 264 99 16 chr5 164450393 164450514 -38635018 + L1ME4a LINE L1 5989 6119 -2 183 318 75 9 chr5 164450630 164450737 -38634795 - L3b LINE CR1 -316 1267 1154 389 189 5 71 chr5 164450931 164451045 -38634487 - MIR SINE MIR -61 147 66 287 361 48 33 chr5 164451073 164451405 -38634127 + L2 LINE L2 2393 2729 -585 889 288 51 6 chr5 164451433 164451746 -38633786 - L1ME3A LINE L1 -293 5877 5551 418 330 120 10 chr5 164452810 164453019 -38632513 + MIR SINE MIR 24 255 -7 2041 121 0 4 chr5 164453596 164453876 -38631656 + AluSg SINE Alu 16 294 -16 566 293 65 20 chr5 164453885 164454131 -38631401 - MIR SINE MIR 0 262 6 184 288 34 0 chr5 164454791 164454850 -38630682 + MER5B DNA MER1_type 1 61 -117 7069 133 27 37 chr5 164455004 164455982 -38629550 - Tigger3b DNA MER2_type -1797 1231 266 2192 127 58 30 chr5 164455982 164456345 -38629187 + THE1C LTR MaLR 3 375 0 7069 133 27 37 chr5 164456345 164456592 -38628940 - Tigger3b DNA MER2_type -2762 266 18 328 291 0 0 chr5 164457133 164457212 -38628320 - L2 LINE L2 -2 3270 3192 1724 175 16 7 chr5 164457955 164458264 -38627268 + AluJo SINE Alu 1 312 0 1938 140 13 22 chr5 164458378 164458693 -38626839 - AluJb SINE Alu 0 312 1 355 167 0 0 chr5 164458878 164458938 -38626594 - AluS SINE Alu -248 60 1 604 296 59 0 chr5 164460057 164460243 -38625289 - MIR SINE MIR -7 255 59 1518 183 13 27 chr5 164460243 164460280 -38625252 - AluJo SINE Alu -4 308 272 2604 94 26 76 chr5 164460280 164460663 -38624869 - THE1B LTR MaLR 0 364 1 1518 183 13 27 chr5 164460663 164460925 -38624607 - AluJo SINE Alu -40 272 13 406 322 45 6 chr5 164461323 164461500 -38624032 + MLT1K LTR MaLR 81 264 -324 611 219 61 110 chr5 164461743 164461971 -38623561 + MIR SINE MIR 24 240 -22 232 191 0 0 chr5 164462112 164462154 -38623378 + MLT1L LTR MaLR 574 615 0 320 269 0 13 chr5 164463032 164463110 -38622422 + MIR SINE MIR 34 110 -152 367 285 63 34 chr5 164463260 164463467 -38622065 + L1MC/D LINE L1 5549 5761 -2047 296 312 43 28 chr5 164464286 164464427 -38621105 + L1MC/D LINE L1 5441 5586 -578 1359 237 38 15 chr5 164464469 164464811 -38620721 + MLT1A2 LTR MaLR 25 374 0 2329 178 40 4 chr5 164464863 164465319 -38620213 - L1MB7 LINE L1 -15 6169 5698 2820 102 3 3 chr5 164466300 164466664 -38618868 + THE1B LTR MaLR 1 364 0 806 98 131 0 chr5 164467550 164467672 -38617860 - AluSg/x SINE Alu 0 312 175 927 126 33 20 chr5 164468082 164468233 -38617299 - MER50 LTR ERV1 -23 711 559 635 210 7 35 chr5 164468292 164468435 -38617097 - MER50 LTR ERV1 -163 571 433 * 1250 99 6 11 chr5 164468424 164468606 -38616926 - MER50 LTR ERV1 -501 233 53 234 215 0 0 chr5 164468606 164468685 -38616847 + (TG)n Simple_repeat Simple_repeat 2 80 0 209 333 0 0 chr5 164468696 164468789 -38616743 + (TG)n Simple_repeat Simple_repeat 2 94 0 363 129 0 57 chr5 164468795 164468865 -38616667 - MER50 LTR ERV1 -668 66 1 355 240 194 8 chr5 164469268 164469397 -38616135 - MIR SINE MIR -70 192 40 1005 230 98 0 chr5 164469753 164469957 -38615575 - MER58A DNA MER1_type 0 224 1 601 221 143 0 chr5 164470078 164470232 -38615300 + MIR SINE MIR 79 254 -8 428 332 45 36 chr5 164470872 164471095 -38614437 - MIR SINE MIR -8 254 30 203 176 0 0 chr5 164471174 164471208 -38614324 + L2 LINE L2 3265 3298 -15 421 340 40 0 chr5 164471287 164471437 -38614095 - MIR SINE MIR -47 215 60 183 372 29 22 chr5 164471508 164471645 -38613887 - MIR3 SINE MIR -36 172 35 351 0 0 0 chr5 164471870 164471909 -38613623 + (TG)n Simple_repeat Simple_repeat 1 39 0 546 301 0 0 chr5 164471997 164472120 -38613412 + L2 LINE L2 3190 3312 -1 203 194 0 0 chr5 164472329 164472365 -38613167 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2445 106 0 0 chr5 164472388 164472700 -38612832 + AluSx SINE Alu 1 312 0 1205 216 99 30 chr5 164475172 164475505 -38610027 + L1MC4a LINE L1 7453 7808 0 474 217 153 63 chr5 164475534 164475723 -38609809 + MIR SINE MIR 17 222 -40 21 0 0 0 chr5 164476116 164476137 -38609395 + AT_rich Low_complexity Low_complexity 1 21 0 1717 119 3 113 chr5 164476277 164476502 -38609030 - AluJb SINE Alu -6 306 130 225 0 0 0 chr5 164476502 164476527 -38609005 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1717 119 3 113 chr5 164476527 164476645 -38608887 - AluJb SINE Alu -182 130 1 397 208 0 13 chr5 164476794 164476871 -38608661 - MIR SINE MIR -109 153 78 396 239 60 17 chr5 164477361 164477478 -38608054 - L2 LINE L2 0 3313 3192 255 224 10 71 chr5 164478380 164478473 -38607059 - MIR SINE MIR -54 208 122 295 250 440 0 chr5 164478473 164478589 -38606943 + MER91A DNA MER1_type 2 168 -28 216 277 21 0 chr5 164478646 164478693 -38606839 + MER91A DNA MER1_type 140 187 -9 * 223 333 24 24 chr5 164478689 164478773 -38606759 - MIR SINE MIR -98 110 27 520 226 83 42 chr5 164479116 164479284 -38606248 + MLT1H1 LTR MaLR 381 555 0 2181 118 6 13 chr5 164479409 164479722 -38605810 - AluSx SINE Alu -1 311 1 546 327 45 10 chr5 164479787 164479989 -38605543 + MIR SINE MIR 2 210 -52 266 0 29 0 chr5 164480006 164480040 -38605492 + (CACAC)n Simple_repeat Simple_repeat 1 35 0 317 309 65 62 chr5 164480057 164480364 -38605168 + L2 LINE L2 2985 3293 -20 273 321 48 0 chr5 164480756 164480840 -38604692 - L2 LINE L2 0 3313 3226 549 267 23 35 chr5 164481080 164481252 -38604280 - MIR3 SINE MIR -19 189 20 2408 148 31 14 chr5 164481427 164481852 -38603680 + LTR23 LTR ERV1 1 432 -5 788 173 6 36 chr5 164481856 164482033 -38603499 - MIR SINE MIR -42 220 52 24 0 0 0 chr5 164482490 164482514 -38603018 + GC_rich Low_complexity Low_complexity 1 24 0 183 261 62 0 chr5 164483362 164483427 -38602105 - L2 LINE L2 -222 3091 3023 691 322 125 28 chr5 164483437 164483652 -38601880 + L2 LINE L2 1067 1260 -2054 2373 77 3 0 chr5 164483652 164483950 -38601582 + AluSq SINE Alu 1 299 -14 691 322 125 28 chr5 164483950 164484191 -38601341 + L2 LINE L2 1260 1567 -1747 1127 172 67 131 chr5 164484194 164484512 -38601020 + MER63B DNA MER1_type 5 295 -767 1676 179 7 17 chr5 164484512 164484808 -38600724 + AluJo SINE Alu 1 293 -19 1127 172 67 131 chr5 164484808 164484878 -38600654 + MER63B DNA MER1_type 295 368 -68 1140 225 122 52 chr5 164484886 164485272 -38600260 + L2 LINE L2 1558 1970 -1344 207 0 0 0 chr5 164486086 164486109 -38599423 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 284 319 60 88 chr5 164486166 164486382 -38599150 + L2 LINE L2 3043 3252 -20 1129 280 59 35 chr5 164486641 164487179 -38598353 - L2 LINE L2 -147 3166 2624 3906 164 57 83 chr5 164487253 164488108 -38597424 + MER21A LTR ERV1 14 846 -85 387 193 6 0 chr5 164488292 164488368 -38597164 + AluJb SINE Alu 67 130 -172 363 145 40 40 chr5 164488362 164488438 -38597094 + MER21A LTR ERV1 850 925 -6 * 446 303 97 0 chr5 164488439 164488594 -38596938 - L2 LINE L2 -683 2631 2462 1534 190 135 35 chr5 164488665 164488951 -38596581 - MLT1C LTR MaLR -27 440 101 2163 161 42 26 chr5 164488951 164489335 -38596197 + MLT1B LTR MaLR 1 390 0 1534 190 135 35 chr5 164489335 164489448 -38596084 - MLT1C LTR MaLR -366 101 1 266 232 38 123 chr5 164489449 164489660 -38595872 + MLT1K LTR MaLR 394 586 -2 205 182 0 0 chr5 164489702 164489735 -38595797 + A-rich Low_complexity Low_complexity 2 34 0 204 40 0 0 chr5 164490184 164490209 -38595323 + (TAA)n Simple_repeat Simple_repeat 3 27 0 230 313 90 0 chr5 164490612 164490679 -38594853 - MIR SINE MIR -36 226 154 362 303 69 37 chr5 164490679 164490867 -38594665 - LTR16A1 LTR ERVL 0 457 264 353 232 0 0 chr5 164490989 164491058 -38594474 - MIR SINE MIR -105 157 89 180 0 0 0 chr5 164491412 164491432 -38594100 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1701 181 21 3 chr5 164491445 164491732 -38593800 + AluJb SINE Alu 4 295 -17 297 277 143 9 chr5 164492991 164493103 -38592429 + MLT1L LTR MaLR 140 266 -349 401 234 81 8 chr5 164493257 164493381 -38592151 + MLT1K LTR MaLR 454 586 -2 494 234 38 95 chr5 164493637 164493795 -38591737 - MIR SINE MIR 0 262 114 722 177 8 15 chr5 164494183 164494313 -38591219 - MLT2B2 LTR ERVL 0 515 387 365 109 36 0 chr5 164494311 164494366 -38591166 - MLT2B1 LTR ERVL -463 57 1 * 681 292 69 34 chr5 164494425 164494716 -38590816 - L2 LINE L2 -5 3308 3008 703 302 112 60 chr5 164494739 164495227 -38590305 + MLT1K LTR MaLR 14 534 -54 1313 214 130 32 chr5 164495227 164495597 -38589935 + MLT1I LTR MaLR 2 407 -2 703 302 112 60 chr5 164495597 164495655 -38589877 + MLT1K LTR MaLR 534 588 0 183 361 82 8 chr5 164495755 164495877 -38589655 - L2 LINE L2 -663 2651 2521 365 281 35 89 chr5 164495945 164496148 -38589384 + MIR3 SINE MIR 5 196 -12 1826 126 26 23 chr5 164496648 164496995 -38588537 + L1MA8 LINE L1 5695 6034 -134 1268 161 0 5 chr5 164496995 164497188 -38588344 + AluJb SINE Alu 93 284 -28 1699 118 8 4 chr5 164497197 164497452 -38588080 + L1MA8 LINE L1 6024 6279 -12 275 155 52 147 chr5 164497927 164498043 -38587489 - MER113 DNA MER1_type? -415 106 2 444 316 40 24 chr5 164498295 164498542 -38586990 + L1MC4 LINE L1 6756 7006 -1036 213 196 0 0 chr5 164498828 164498874 -38586658 + (CACCAT)n Simple_repeat Simple_repeat 5 50 0 2025 223 75 35 chr5 164500091 164500655 -38584877 - MLT1E LTR MaLR 0 593 8 512 250 50 0 chr5 164500753 164500873 -38584659 - L2 LINE L2 -11 3261 3136 239 330 54 9 chr5 164500956 164501068 -38584464 + L2 LINE L2 3137 3253 -19 226 382 41 8 chr5 164502709 164502832 -38582700 + L2 LINE L2 3146 3272 0 892 204 52 14 chr5 164503187 164503398 -38582134 + L2 LINE L2 2517 2735 -579 462 174 76 15 chr5 164503398 164503563 -38581969 - LTR33A LTR ERVL -5 518 289 535 305 36 39 chr5 164503850 164504133 -38581399 + L2 LINE L2 2759 3037 -276 24 0 0 0 chr5 164504140 164504164 -38581368 + AT_rich Low_complexity Low_complexity 1 24 0 2109 98 10 10 chr5 164504243 164504538 -38580994 - AluSq SINE Alu -18 295 1 223 200 40 27 chr5 164504559 164504634 -38580898 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 252 263 113 70 chr5 164504634 164504796 -38580736 + L2 LINE L2 3115 3287 -26 546 127 0 0 chr5 164504796 164504875 -38580657 + L1MB1 LINE L1 6087 6165 -3 252 263 113 70 chr5 164504875 164504898 -38580634 + L2 LINE L2 3287 3308 -5 273 300 29 50 chr5 164505100 164505240 -38580292 + L2 LINE L2 3164 3300 -13 2260 99 3 0 chr5 164505271 164505573 -38579959 + AluSx SINE Alu 1 303 -9 750 260 33 29 chr5 164507500 164507742 -38577790 - MIR SINE MIR -10 252 10 441 336 89 5 chr5 164507906 164508120 -38577412 + MIR SINE MIR 9 240 -22 254 313 138 44 chr5 164508609 164508906 -38576626 + L2 LINE L2 2908 3232 -40 646 248 66 35 chr5 164509973 164510191 -38575341 + MIR SINE MIR 39 261 -1 698 158 105 0 chr5 164510912 164511026 -38574506 - FLAM_C SINE Alu -7 126 1 441 299 130 59 chr5 164511133 164511594 -38573938 - L2 LINE L2 -7 3306 2813 1939 131 64 59 chr5 164511680 164512053 -38573479 + THE1C LTR MaLR 1 375 0 1523 226 92 97 chr5 164512635 164513096 -38572436 + Charlie7 DNA MER1_type 5 464 -2148 2018 137 6 10 chr5 164513096 164513409 -38572123 + AluSq SINE Alu 1 312 -1 1523 226 92 97 chr5 164513409 164513588 -38571944 + Charlie7 DNA MER1_type 464 642 -1970 202 352 48 19 chr5 164514208 164514313 -38571219 + L2 LINE L2 3188 3295 -18 739 289 32 16 chr5 164514389 164514635 -38570897 - MIR SINE MIR -12 250 1 321 281 62 0 chr5 164514663 164514809 -38570723 - L1ME4a LINE L1 -205 5916 5762 215 231 62 15 chr5 164514988 164515053 -38570479 + MIR SINE MIR 84 151 -111 198 374 114 16 chr5 164515948 164516194 -38569338 - L3b LINE CR1 -27 1556 1287 292 294 141 37 chr5 164516397 164516560 -38568972 + MIR SINE MIR 28 207 -55 24 0 0 0 chr5 164516638 164516662 -38568870 + AT_rich Low_complexity Low_complexity 1 24 0 360 296 40 108 chr5 164516744 164516809 -38568723 - MIR SINE MIR -10 252 184 2297 91 0 0 chr5 164516809 164517107 -38568425 - AluY SINE Alu -13 298 1 360 296 40 108 chr5 164517107 164517291 -38568241 - MIR SINE MIR -78 184 20 3435 131 4 13 chr5 164517313 164517840 -38567692 - L1MB3 LINE L1 -8 6175 5654 943 148 7 0 chr5 164518196 164518338 -38567194 + FRAM SINE Alu 22 164 -12 227 289 13 0 chr5 164518478 164518554 -38566978 + MIR SINE MIR 186 262 0 257 383 11 40 chr5 164518597 164518772 -38566760 + MIR SINE MIR 21 190 -72 535 251 87 69 chr5 164520604 164520835 -38564697 - MIR SINE MIR 0 262 28 2372 92 0 19 chr5 164521440 164521755 -38563777 - AluSc SINE Alu 0 309 1 539 309 97 46 chr5 164522029 164522443 -38563089 + L2 LINE L2 2836 3270 -2 2117 124 7 7 chr5 164522521 164522820 -38562712 + AluSc SINE Alu 1 299 -10 1741 167 3 20 chr5 164523136 164523429 -38562103 + AluJo SINE Alu 1 288 -24 17008 71 13 4 chr5 164524114 164526389 -38559143 - L1P LINE L1 -2354 3792 1498 356 249 136 19 chr5 164526820 164526974 -38558558 - MIR SINE MIR -28 180 2 666 297 22 9 chr5 164527556 164527778 -38557754 + L1MC/D LINE L1 5576 5800 -2008 244 297 40 0 chr5 164527939 164528013 -38557519 - Charlie8 DNA MER1_type -2145 272 196 843 176 73 0 chr5 164528345 164528510 -38557022 + MER5A DNA MER1_type 6 182 -7 302 230 108 0 chr5 164528512 164528586 -38556946 - MER5A DNA MER1_type -102 87 6 210 91 0 0 chr5 164529071 164529104 -38556428 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 486 353 73 49 chr5 164529116 164529524 -38556008 - L2 LINE L2 -25 3247 2830 249 259 185 31 chr5 164530430 164530592 -38554940 + MIR SINE MIR 28 214 -48 1958 189 64 3 chr5 164530592 164530936 -38554596 - MLT1A1 LTR MaLR 0 365 1 305 316 93 52 chr5 164531078 164531257 -38554275 + MIR SINE MIR 15 201 -61 793 179 95 0 chr5 164531257 164531425 -38554107 - MER5A DNA MER1_type 0 189 6 197 325 50 0 chr5 164532471 164532551 -38552981 + MIR SINE MIR 124 207 -55 216 303 172 8 chr5 164533511 164533633 -38551899 + MIR SINE MIR 22 163 -99 2251 111 0 0 chr5 164533821 164534119 -38551413 + AluSc SINE Alu 1 298 -11 271 302 112 0 chr5 164534308 164534424 -38551108 + L2 LINE L2 3138 3266 -6 303 297 46 52 chr5 164535072 164535238 -38550294 - MIR SINE MIR -64 144 17 330 299 159 21 chr5 164535957 164536148 -38549384 - MIR SINE MIR -6 256 42 266 319 104 28 chr5 164536368 164536512 -38549020 - MER5A DNA MER1_type 0 189 35 2232 133 0 0 chr5 164536772 164537080 -38548452 - AluSx SINE Alu -4 308 1 236 250 0 0 chr5 164537538 164537582 -38547950 + L2 LINE L2 3219 3262 -10 26 0 0 0 chr5 164537610 164537636 -38547896 + AT_rich Low_complexity Low_complexity 1 26 0 766 144 14 82 chr5 164537649 164537795 -38547737 + AluJb SINE Alu 1 136 -176 1186 188 55 12 chr5 164538196 164538451 -38547081 + L1MD3 LINE L1 7730 7995 0 787 254 113 72 chr5 164538464 164539083 -38546449 + L2 LINE L2 2664 3312 -1 336 290 61 91 chr5 164539089 164539320 -38546212 + L2 LINE L2 3026 3249 -23 1778 166 0 27 chr5 164539372 164539667 -38545865 - AluJo SINE Alu -25 287 1 494 164 97 45 chr5 164540273 164540407 -38545125 + L1MA9 LINE L1 6162 6302 -10 282 309 0 0 chr5 164540490 164540574 -38544958 + MIR SINE MIR 64 147 -115 198 0 0 0 chr5 164540614 164540636 -38544896 + (CA)n Simple_repeat Simple_repeat 2 23 0 254 323 182 10 chr5 164540687 164540879 -38544653 + L2 LINE L2 3055 3279 -34 554 269 163 38 chr5 164541774 164542094 -38543438 - L2 LINE L2 -21 3292 2933 233 277 134 17 chr5 164542172 164542291 -38543241 + MIR SINE MIR 66 198 -64 873 281 33 12 chr5 164542293 164542535 -38542997 - MIR SINE MIR 0 262 16 218 250 0 0 chr5 164542727 164542767 -38542765 - MIR SINE MIR -139 69 30 1513 235 118 66 chr5 164543460 164543935 -38541597 + L2 LINE L2 2235 2684 -629 2134 125 0 0 chr5 164543935 164544230 -38541302 - AluSx SINE Alu -17 295 1 1513 235 118 66 chr5 164544230 164544795 -38540737 + L2 LINE L2 2684 3313 0 1029 271 69 76 chr5 164544831 164545370 -38540162 - MLT1K LTR MaLR -5 583 49 443 367 37 9 chr5 164545389 164545607 -38539925 + L2 LINE L2 2687 2910 -404 195 129 0 0 chr5 164545607 164545638 -38539894 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 181 143 0 0 chr5 164545646 164545674 -38539858 - MIR SINE MIR -10 252 225 341 335 126 18 chr5 164546125 164546292 -38539240 - MIR SINE MIR -44 218 34 365 271 112 45 chr5 164546393 164546791 -38538741 + MLT1G1 LTR MaLR 100 549 0 277 274 117 56 chr5 164547016 164547195 -38538337 - MIR3 SINE MIR -2 206 17 329 342 13 13 chr5 164547786 164547938 -38537594 - MIR3 SINE MIR -6 202 51 280 172 16 62 chr5 164548273 164548337 -38537195 - MIR SINE MIR -139 123 63 622 292 32 40 chr5 164548497 164548747 -38536785 + MIR SINE MIR 15 262 0 1731 161 7 43 chr5 164549076 164549381 -38536151 + AluJo SINE Alu 1 294 -18 951 271 91 46 chr5 164549405 164550069 -38535463 + L2 LINE L2 2403 3313 0 11373 191 34 18 chr5 164550162 164551000 -38534532 - L1PA16 LINE L1 0 6166 5343 2532 108 131 8 chr5 164551000 164551381 -38534151 - MSTA LTR MaLR 0 428 1 11373 191 34 18 chr5 164551381 164554140 -38531392 - L1PA16 LINE L1 -823 5343 2508 7790 33 0 0 chr5 164554142 164554191 -38531341 - L1PA4 LINE L1 -2 6153 6105 360 0 0 0 chr5 164554191 164554231 -38531301 + (TATG)n Simple_repeat Simple_repeat 3 42 0 7790 33 0 0 chr5 164554231 164555331 -38530201 - L1PA4 LINE L1 -49 6106 5007 * 15148 46 0 1 chr5 164555328 164557862 -38527670 + L1PA6 LINE L1 3611 6154 0 490 197 72 40 chr5 164557877 164558029 -38527503 + L1ME4a LINE L1 5962 6118 -3 1660 144 37 19 chr5 164558288 164558559 -38526973 + AluJb SINE Alu 1 276 -36 359 259 161 0 chr5 164558568 164558711 -38526821 + L1MC4 LINE L1 7264 7429 -613 513 254 146 52 chr5 164558793 164559404 -38526128 + L1MC5 LINE L1 7270 7937 -24 351 98 0 0 chr5 164559763 164559824 -38525708 + (TG)n Simple_repeat Simple_repeat 2 62 0 607 170 0 0 chr5 164560265 164560365 -38525167 + MER103 DNA DNA 15 114 -52 249 265 216 29 chr5 164560600 164560702 -38524830 - MIR SINE MIR -134 128 8 1740 181 34 5 chr5 164561358 164561739 -38523793 - Charlie5 DNA MER1_type 0 2624 2233 1144 171 14 23 chr5 164561770 164561987 -38523545 - AluJo SINE Alu -11 301 87 379 221 23 0 chr5 164561988 164562074 -38523458 - Charlie5 DNA MER1_type -2520 92 5 1826 233 126 44 chr5 164562082 164562803 -38522729 + MER20B DNA MER1_type 5 784 0 196 339 61 17 chr5 164562941 164563056 -38522476 - L2 LINE L2 -8 3305 3186 1289 104 0 71 chr5 164563545 164563569 -38521963 + L1PB1 LINE L1 5950 5974 -177 1944 76 58 40 chr5 164563569 164563924 -38521608 + AluSx SINE Alu 1 360 0 1289 104 0 71 chr5 164563924 164564109 -38521423 + L1PB1 LINE L1 5974 6145 -6 2201 118 0 0 chr5 164564227 164564556 -38520976 + L1PA15-16 LINE L1 1664 1992 -4857 * 2229 114 0 11 chr5 164564554 164564757 -38520775 + L1PA15-16 LINE L1 1942 2141 -4708 1927 162 3 13 chr5 164564757 164565066 -38520466 - AluSx SINE Alu -5 307 2 2229 114 0 11 chr5 164565066 164565212 -38520320 + L1PA15-16 LINE L1 2141 2287 -4562 2161 206 14 15 chr5 164565212 164565824 -38519708 + L1PA15-16 LINE L1 2603 3220 -3629 43888 54 2 1 chr5 164565825 164571267 -38514265 + L1P2 LINE L1 1 5448 -707 8085 26 1 2 chr5 164571433 164572332 -38513200 + L1PA4 LINE L1 5254 6151 -4 747 243 172 46 chr5 164572344 164572618 -38512914 - L1ME4a LINE L1 -22 6099 5861 225 0 0 0 chr5 164572618 164572643 -38512889 + (TA)n Simple_repeat Simple_repeat 2 26 0 747 243 172 46 chr5 164572643 164572821 -38512711 - L1ME4a LINE L1 -260 5861 5590 678 224 10 58 chr5 164572836 164573041 -38512491 - L1MD3 LINE L1 -11 7984 7790 1190 233 129 8 chr5 164573381 164573479 -38512053 - MER113 DNA MER1_type? -78 443 358 203 0 37 0 chr5 164573479 164573506 -38512026 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2089 129 0 0 chr5 164573513 164573792 -38511740 - AluSx SINE Alu -22 290 12 1190 233 129 8 chr5 164573792 164574080 -38511452 - MER113 DNA MER1_type? -168 353 1 569 299 0 46 chr5 164574240 164574434 -38511098 - MIR SINE MIR -49 213 29 2060 159 0 0 chr5 164574441 164574750 -38510782 - AluJb SINE Alu -3 309 1 560 309 43 104 chr5 164575983 164576584 -38508948 - L2 LINE L2 -7 3265 2703 298 321 22 8 chr5 164580772 164580906 -38504626 + MIR SINE MIR 80 215 -47 959 255 8 23 chr5 164581696 164581955 -38503577 + MIR SINE MIR 4 258 -4 649 169 5 155 chr5 164582978 164583191 -38502341 + MIR SINE MIR 74 254 -8 567 268 83 35 chr5 164583329 164583557 -38501975 + L1ME1 LINE L1 5928 6166 0 306 0 0 0 chr5 164583747 164583781 -38501751 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1350 143 57 35 chr5 164584136 164584366 -38501166 + MER46A DNA MER2_type 2 236 0 767 143 169 32 chr5 164584392 164584445 -38501087 - FRAM SINE Alu -138 174 130 180 0 0 0 chr5 164584445 164584465 -38501067 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 767 143 169 32 chr5 164584465 164584565 -38500967 - FRAM SINE Alu -182 130 1 330 255 141 27 chr5 164584651 164584800 -38500732 + MER103 DNA DNA 1 166 0 302 228 110 48 chr5 164585148 164585293 -38500239 - MER104 DNA Tc2 -9 171 18 349 157 0 29 chr5 164585295 164585365 -38500167 + L1ME2 LINE L1 5895 5962 -202 240 233 53 15 chr5 164585386 164585473 -38500059 + L1ME2 LINE L1 6073 6161 -5 281 152 0 0 chr5 164586208 164586254 -38499278 - L2 LINE L2 -7 3265 3220 1203 161 0 0 chr5 164587015 164587208 -38498324 - L1MB3 LINE L1 -2 6181 5989 201 160 20 0 chr5 164587208 164587253 -38498279 + (TA)n Simple_repeat Simple_repeat 2 47 0 586 249 69 6 chr5 164587403 164587576 -38497956 + MIR SINE MIR 75 258 -4 283 277 58 44 chr5 164587644 164587781 -38497751 + MIR SINE MIR 124 262 0 351 254 68 8 chr5 164588127 164588245 -38497287 - MIR SINE MIR -11 251 127 349 292 123 8 chr5 164588899 164589029 -38496503 + L2 LINE L2 3169 3313 0 342 259 111 31 chr5 164590698 164590860 -38494672 - MIR SINE MIR -1 261 87 21 36 0 0 chr5 164591681 164591709 -38493823 + AT_rich Low_complexity Low_complexity 1 28 0 246 311 11 0 chr5 164591721 164591811 -38493721 - MIR SINE MIR -4 258 168 259 311 54 77 chr5 164592097 164592319 -38493213 - L3 LINE CR1 -11 1566 1350 581 282 128 8 chr5 164592471 164592705 -38492827 + MIR SINE MIR 1 262 0 373 287 139 0 chr5 164593142 164593271 -38492261 - L2 LINE L2 0 3313 3167 1071 269 44 3 chr5 164593282 164593580 -38491952 - LTR16C LTR ERVL -2 489 180 216 0 0 0 chr5 164593727 164593751 -38491781 + (CA)n Simple_repeat Simple_repeat 1 24 0 383 319 54 36 chr5 164593809 164594085 -38491447 - L2 LINE L2 -217 3096 2816 2101 113 25 148 chr5 164594102 164594158 -38491374 - MSTA LTR MaLR 0 428 367 6906 88 15 3 chr5 164594158 164595301 -38490231 - L1PA14 LINE L1 -3 6158 5009 2101 113 25 148 chr5 164595301 164595732 -38489800 - MSTA LTR MaLR -61 367 1 2437 126 9 0 chr5 164595833 164596175 -38489357 + L1PA16 LINE L1 5820 6164 -2 387 255 102 64 chr5 164596617 164596774 -38488758 - MER5A DNA MER1_type -18 171 9 2191 126 7 0 chr5 164596868 164597178 -38488354 - AluSx SINE Alu 0 312 1 223 318 154 67 chr5 164597872 164598067 -38487465 - L2 LINE L2 -613 2701 2490 562 203 89 38 chr5 164598128 164598286 -38487246 - MIR SINE MIR -74 188 23 2351 112 0 0 chr5 164598433 164598745 -38486787 + AluSq SINE Alu 1 312 -1 301 246 228 0 chr5 164598753 164598867 -38486665 + MIR SINE MIR 47 186 -76 466 320 30 20 chr5 164599160 164599363 -38486169 - MIR3 SINE MIR 0 208 4 336 262 87 0 chr5 164599828 164599931 -38485601 - L1ME LINE L1 -442 5679 5568 454 245 20 0 chr5 164599934 164600036 -38485496 - MLT1K LTR MaLR 0 588 485 239 298 137 48 chr5 164600036 164600058 -38485474 - LTR67 LTR ERVL 0 557 423 402 21 0 0 chr5 164600208 164600218 -38485314 + (TG)n Simple_repeat Simple_repeat 1 57 0 402 21 0 0 chr5 164600218 164600265 -38485267 + (TG)n Simple_repeat Simple_repeat 2 48 0 385 198 35 12 chr5 164600305 164600391 -38485141 - LTR67 LTR ERVL -74 483 396 231 318 15 15 chr5 164600507 164600573 -38484959 - LTR67 LTR ERVL -341 216 151 321 26 0 0 chr5 164600623 164600661 -38484871 + (TATG)n Simple_repeat Simple_repeat 2 39 0 925 174 13 0 chr5 164600665 164600820 -38484712 - FRAM SINE Alu -20 156 1 239 282 26 13 chr5 164600863 164600941 -38484591 - LTR67 LTR ERVL -477 80 2 216 0 0 0 chr5 164601777 164601801 -38483731 + (T)n Simple_repeat Simple_repeat 1 24 0 783 299 88 66 chr5 164602399 164602900 -38482632 - MLT1K LTR MaLR -10 578 67 2434 94 0 0 chr5 164603491 164603799 -38481733 - AluY SINE Alu -3 308 1 456 19 0 0 chr5 164603839 164603892 -38481640 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 525 176 12 0 chr5 164603953 164604038 -38481494 + FLAM_C SINE Alu 31 116 -27 2599 58 0 0 chr5 164604425 164604734 -38480798 - AluY SINE Alu -2 309 1 823 136 23 17 chr5 164604735 164604911 -38480621 + CT-rich Low_complexity Low_complexity 1 177 0 2193 123 7 0 chr5 164604911 164605213 -38480319 - AluSx SINE Alu -8 304 1 2180 100 13 16 chr5 164605520 164605829 -38479703 + AluSx SINE Alu 1 308 -4 276 247 155 105 chr5 164606265 164606900 -38478632 - L2 LINE L2 0 3313 2589 329 294 49 42 chr5 164606945 164607088 -38478444 + MIR SINE MIR 119 262 0 2018 145 3 13 chr5 164607346 164607650 -38477882 + AluJb SINE Alu 1 301 -11 247 335 145 13 chr5 164608044 164608196 -38477336 - MIR SINE MIR -90 172 1 2299 121 0 3 chr5 164608253 164608566 -38476966 - AluSx SINE Alu 0 312 1 403 205 102 106 chr5 164608835 164609138 -38476394 + L1ME4a LINE L1 5678 5979 -142 1671 117 85 0 chr5 164609148 164609444 -38476088 - MER33 DNA MER1_type -10 314 1 23 68 0 0 chr5 164609568 164609612 -38475920 + AT_rich Low_complexity Low_complexity 1 44 0 1110 158 0 0 chr5 164610194 164610359 -38475173 + FRAM SINE Alu 1 164 -12 259 138 0 52 chr5 164610657 164610715 -38474817 - MIR SINE MIR -32 230 176 3498 87 7 4 chr5 164610733 164611195 -38474337 - L1PB1 LINE L1 -1 6150 5688 803 159 131 0 chr5 164611197 164611342 -38474190 + MSTD LTR MaLR 233 396 0 277 361 33 25 chr5 164612030 164612152 -38473380 - MIR SINE MIR -72 190 68 402 21 0 0 chr5 164612473 164612520 -38473012 + (ATG)n Simple_repeat Simple_repeat 1 47 0 473 229 172 13 chr5 164612520 164612693 -38472839 - MIR SINE MIR -5 257 42 238 277 84 0 chr5 164612739 164612822 -38472710 + MIR SINE MIR 52 141 -121 312 161 0 0 chr5 164613028 164613090 -38472442 + (CCA)n Simple_repeat Simple_repeat 2 63 0 195 264 94 0 chr5 164613468 164613521 -38472011 + L2 LINE L2 3199 3256 -57 * 687 345 73 14 chr5 164613516 164613870 -38471662 - L2 LINE L2 -39 3233 2859 221 320 13 0 chr5 164614488 164614502 -38471030 + GA-rich Low_complexity Low_complexity 1 13 -66 2681 204 87 18 chr5 164614502 164615052 -38470480 - MLT1E LTR MaLR -3 590 3 221 320 13 0 chr5 164615052 164615115 -38470417 + GA-rich Low_complexity Low_complexity 13 79 0 468 331 41 29 chr5 164615132 164615377 -38470155 - MIR SINE MIR -10 252 5 483 270 44 53 chr5 164616341 164616575 -38468957 + MIR SINE MIR 21 247 -15 716 261 37 28 chr5 164616806 164617021 -38468511 + MIR SINE MIR 46 262 0 183 256 0 0 chr5 164617242 164617285 -38468247 - MIR3 SINE MIR -1 207 165 365 221 114 43 chr5 164617655 164617795 -38467737 - MIR3 SINE MIR -46 162 13 360 224 0 0 chr5 164617988 164618055 -38467477 - MIR SINE MIR 0 262 196 301 326 101 43 chr5 164618023 164618161 -38467371 + MER91A DNA MER1_type 8 153 -43 * 242 258 47 0 chr5 164618272 164618342 -38467190 - MIR SINE MIR -108 100 30 390 269 29 0 chr5 164618400 164618504 -38467028 + L2 LINE L2 3164 3270 -2 * 434 282 40 8 chr5 164618503 164618627 -38466905 - MIR SINE MIR -115 147 20 1114 168 11 16 chr5 164619750 164619940 -38465592 + MER5A DNA MER1_type 1 189 0 518 211 12 94 chr5 164620036 164620117 -38465415 + MIR SINE MIR 45 104 -153 742 228 127 21 chr5 164620117 164620306 -38465226 + MER63A DNA MER1_type 2 210 0 518 211 12 94 chr5 164620306 164620389 -38465143 + MIR SINE MIR 104 192 -65 474 244 163 20 chr5 164620391 164620588 -38464944 - MIR SINE MIR 0 262 40 514 274 119 35 chr5 164620888 164621231 -38464301 - L1ME4a LINE L1 -128 5993 5622 1787 223 50 43 chr5 164621392 164621699 -38463833 - L1MC5 LINE L1 -44 7917 7603 2011 163 0 13 chr5 164621699 164622006 -38463526 - AluJb SINE Alu -7 305 3 1787 223 50 43 chr5 164622006 164622281 -38463251 - L1MC5 LINE L1 -358 7603 7331 1184 178 15 0 chr5 164622282 164622484 -38463048 - MER3 DNA MER1_type 0 209 5 520 318 70 50 chr5 164623233 164623491 -38462041 - L2 LINE L2 -38 3234 2972 764 220 121 16 chr5 164623712 164623894 -38461638 - MER63A DNA MER1_type -1 209 9 251 236 0 0 chr5 164624721 164624809 -38460723 + L2 LINE L2 3188 3272 0 * 284 268 29 132 chr5 164624808 164625013 -38460519 - L2 LINE L2 -55 3217 3034 1931 150 3 0 chr5 164625485 164625779 -38459753 + AluJo SINE Alu 1 295 -17 323 220 119 34 chr5 164626182 164626300 -38459232 - L1MC5 LINE L1 -66 7895 7768 1715 151 44 7 chr5 164626341 164626653 -38458879 + AluJo SINE Alu 1 322 0 369 284 119 0 chr5 164626663 164626772 -38458760 - MIR3 SINE MIR -20 188 67 1512 128 43 4 chr5 164627808 164628042 -38457490 - L1PB1 LINE L1 -4 6147 5905 284 192 34 51 chr5 164628202 164628354 -38457178 + L2 LINE L2 3114 3304 -9 286 216 45 11 chr5 164628445 164628533 -38456999 - MIR SINE MIR -13 249 159 2431 184 134 11 chr5 164628533 164629072 -38456460 - MER77 LTR ERV1 0 605 1 229 350 124 22 chr5 164629072 164629209 -38456323 - MIR SINE MIR -99 163 13 229 293 37 0 chr5 164629755 164629837 -38455695 - MER103 DNA DNA -80 86 2 210 333 111 0 chr5 164630032 164630122 -38455410 - L2 LINE L2 0 3272 3173 254 294 128 0 chr5 164630984 164631086 -38454446 - MLT1K LTR MaLR -326 262 148 594 242 43 90 chr5 164631764 164632020 -38453512 + MIR SINE MIR 13 256 -6 413 318 9 9 chr5 164632536 164632696 -38452836 - MER5B DNA MER1_type -23 166 4 1962 143 7 10 chr5 164632696 164632997 -38452535 + AluJb SINE Alu 1 300 -12 520 259 26 86 chr5 164632999 164633084 -38452448 + MIR SINE MIR 26 115 -147 2566 99 48 17 chr5 164633084 164633437 -38452095 - THE1B LTR MaLR 0 364 1 12565 81 14 12 chr5 164633437 164635013 -38450519 - THE1B-int LTR MaLR 0 1580 2 2550 91 50 6 chr5 164635014 164635354 -38450178 - THE1A LTR MaLR 0 355 1 520 259 26 86 chr5 164635354 164635512 -38450020 + MIR SINE MIR 113 259 -3 231 224 35 0 chr5 164635547 164635605 -38449927 + CT-rich Low_complexity Low_complexity 3 62 0 616 253 221 28 chr5 164635607 164635892 -38449640 - MLT1J LTR MaLR -28 483 144 588 263 64 53 chr5 164636216 164636573 -38448959 - L1ME4a LINE L1 -7 6114 5754 276 300 55 0 chr5 164637199 164637309 -38448223 - MIR SINE MIR -115 147 32 693 285 97 4 chr5 164637369 164637597 -38447935 + MIR SINE MIR 12 260 -2 575 122 0 0 chr5 164637660 164637742 -38447790 - L1PA13 LINE L1 -25 6138 6057 469 214 0 0 chr5 164637738 164637827 -38447705 - L1ME4a LINE L1 -792 5541 5453 * 215 250 0 0 chr5 164638937 164638989 -38446543 + (TA)n Simple_repeat Simple_repeat 2 53 0 1696 147 3 50 chr5 164639122 164639241 -38446291 - Tigger1 DNA MER2_type 0 2418 2295 2238 104 14 0 chr5 164639241 164639538 -38445994 + AluSc SINE Alu 1 301 -8 1696 147 3 50 chr5 164639538 164639718 -38445814 - Tigger1 DNA MER2_type -123 2295 2133 * 5774 132 16 11 chr5 164639716 164640603 -38444929 - Tigger1 DNA MER2_type -1527 891 1 46 45 0 0 chr5 164641017 164641084 -38444448 + AT_rich Low_complexity Low_complexity 1 67 0 206 182 45 0 chr5 164641094 164641138 -38444394 + (TATG)n Simple_repeat Simple_repeat 3 48 0 192 77 0 0 chr5 164641229 164641255 -38444277 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 202 311 122 0 chr5 164641401 164641491 -38444041 - L2 LINE L2 -56 3216 3116 187 154 103 0 chr5 164642166 164642205 -38443327 - L2 LINE L2 -8 3305 3263 368 331 129 0 chr5 164642305 164642429 -38443103 - L2 LINE L2 -18 3254 3115 305 293 50 0 chr5 164642487 164642586 -38442946 + L2 LINE L2 2311 2414 -900 487 286 39 7 chr5 164642622 164642776 -38442756 - L2 LINE L2 0 3272 3114 2313 87 0 7 chr5 164642777 164643076 -38442456 + AluSx SINE Alu 3 299 -13 621 0 0 0 chr5 164643076 164643145 -38442387 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 2039 110 0 67 chr5 164643180 164643586 -38441946 + Charlie3 DNA MER1_type 1 2712 0 706 244 48 39 chr5 164643791 164644020 -38441512 + L1ME3 LINE L1 5910 6140 -22 339 222 106 85 chr5 164644033 164644222 -38441310 + L1ME4a LINE L1 5926 6118 -3 601 272 33 72 chr5 164644858 164645194 -38440338 + L1ME4a LINE L1 5444 5760 -361 1003 142 0 0 chr5 164645399 164645554 -38439978 + L1MB2 LINE L1 6015 6169 -2 448 226 57 57 chr5 164645580 164645739 -38439793 + L1ME4a LINE L1 5941 6099 -22 281 306 122 10 chr5 164646589 164646687 -38438845 - L2 LINE L2 -1 3271 3163 1724 177 14 3 chr5 164646748 164647042 -38438490 + AluJb SINE Alu 1 297 -15 220 372 58 17 chr5 164647139 164647311 -38438221 - L2 LINE L2 -345 2969 2791 830 284 33 78 chr5 164647314 164647673 -38437859 - MLT1I LTR MaLR 0 409 67 266 327 109 0 chr5 164647748 164647904 -38437628 - L2 LINE L2 -560 2754 2582 310 336 127 0 chr5 164649124 164649234 -38436298 + L2 LINE L2 2579 2702 -612 2892 185 21 16 chr5 164649244 164649817 -38435715 - L1ME1 LINE L1 -19 6147 5572 438 314 92 44 chr5 164649817 164650267 -38435265 + L2 LINE L2 2688 3169 -144 192 320 93 0 chr5 164650267 164650342 -38435190 + MIR SINE MIR 72 153 -109 16008 45 9 0 chr5 164650485 164653198 -38432334 - L1PA5 LINE L1 0 6154 3424 438 228 13 13 chr5 164653440 164653540 -38431992 - MER63 DNA MER1_type 0 1061 737 449 205 16 47 chr5 164654815 164654942 -38430590 - MIR SINE MIR -62 200 78 635 236 112 6 chr5 164655146 164655307 -38430225 - MER45A DNA AcHobo 0 178 1 240 257 0 43 chr5 164655329 164655399 -38430133 + MIR SINE MIR 187 253 -9 210 37 0 0 chr5 164656057 164656084 -38429448 + (CA)n Simple_repeat Simple_repeat 1 27 0 184 292 0 0 chr5 164656645 164656693 -38428839 + L2 LINE L2 3206 3253 -19 221 358 0 0 chr5 164656805 164656872 -38428660 - L2 LINE L2 -2 3270 3204 506 182 9 0 chr5 164656942 164657052 -38428480 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 245 347 62 14 chr5 164657148 164657292 -38428240 - MIR SINE MIR -111 151 1 219 338 0 0 chr5 164658115 164658195 -38427337 + C-rich Low_complexity Low_complexity 2 81 0 234 307 147 13 chr5 164658244 164658394 -38427138 + L2 LINE L2 2471 2640 -674 221 314 88 15 chr5 164658538 164658675 -38426857 - MIR SINE MIR -15 247 101 5943 138 44 34 chr5 164658702 164660729 -38424803 - L1PB3 LINE L1 0 6154 4125 190 297 16 16 chr5 164660977 164661041 -38424491 + L2 LINE L2 3207 3270 -2 1465 222 76 71 chr5 164662654 164662810 -38422722 - L1MC5 LINE L1 -36 7925 7771 1630 153 8 0 chr5 164662810 164663064 -38422468 - AluSx SINE Alu -14 298 43 1465 222 76 71 chr5 164663064 164663192 -38422340 - L1MC5 LINE L1 -190 7771 7645 2042 107 7 7 chr5 164663192 164663473 -38422059 + AluSx SINE Alu 1 281 -31 315 0 0 0 chr5 164663475 164663510 -38422022 + (CA)n Simple_repeat Simple_repeat 2 36 0 1465 222 76 71 chr5 164663510 164663785 -38421747 - L1MC5 LINE L1 -316 7645 7356 2122 148 0 0 chr5 164663785 164664095 -38421437 - AluSx SINE Alu -2 310 1 1465 222 76 71 chr5 164664095 164664191 -38421341 - L1MC5 LINE L1 -605 7356 7262 4030 182 65 19 chr5 164664213 164665438 -38420094 - L1MB7 LINE L1 -54 6130 4853 274 139 0 0 chr5 164665578 164665621 -38419911 - L1MC5 LINE L1 -764 7197 7155 251 295 25 21 chr5 164666376 164666487 -38419045 + MIR SINE MIR 37 149 -63 256 315 14 0 chr5 164666950 164667023 -38418509 + MIR SINE MIR 60 133 -75 596 295 28 28 chr5 164667281 164667532 -38418000 + MIR SINE MIR 2 252 -10 380 280 104 46 chr5 164668022 164668329 -38417203 - L2 LINE L2 -7 3306 2982 441 0 0 0 chr5 164668750 164668799 -38416733 + (CA)n Simple_repeat Simple_repeat 2 50 0 368 298 22 51 chr5 164668944 164669063 -38416469 + MIR SINE MIR 85 199 -63 762 187 81 38 chr5 164669063 164669272 -38416260 - MER20 DNA MER1_type -1 218 1 368 298 22 51 chr5 164669272 164669330 -38416202 + MIR SINE MIR 199 257 -5 309 277 62 31 chr5 164669774 164669904 -38415628 - MIR3 SINE MIR -65 143 10 412 287 16 8 chr5 164669955 164670077 -38415455 + MER117 DNA MER1_type 73 195 -2 1203 209 47 64 chr5 164671242 164671586 -38413946 + MER58B DNA MER1_type 4 341 0 281 231 102 56 chr5 164671839 164671947 -38413585 + L2 LINE L2 3160 3272 0 192 167 28 0 chr5 164672738 164672774 -38412758 + L2 LINE L2 3180 3216 -97 558 272 40 64 chr5 164673571 164673821 -38411711 + MIR SINE MIR 16 259 -3 2547 74 3 0 chr5 164674047 164674359 -38411173 - AluSp SINE Alu 0 313 1 225 167 185 0 chr5 164674589 164674643 -38410889 - L2 LINE L2 -8 3264 3201 2157 138 3 0 chr5 164675414 164675711 -38409821 + AluSx SINE Alu 1 298 -14 21 57 0 0 chr5 164675927 164675962 -38409570 + AT_rich Low_complexity Low_complexity 1 35 0 431 278 0 38 chr5 164676060 164676193 -38409339 - MIR SINE MIR -127 135 8 229 286 13 26 chr5 164676489 164676566 -38408966 + L2 LINE L2 3194 3269 -3 739 151 24 24 chr5 164676864 164676990 -38408542 + FLAM_A SINE Alu 2 127 -6 2209 122 0 0 chr5 164677002 164677298 -38408234 + AluSx SINE Alu 1 296 -16 651 295 46 4 chr5 164677705 164677942 -38407590 - MIR SINE MIR 0 262 16 4386 269 71 23 chr5 164678227 164680621 -38404911 + L1ME3A LINE L1 3446 5951 -219 24 32 0 0 chr5 164680916 164680947 -38404585 + AT_rich Low_complexity Low_complexity 1 31 0 213 182 0 23 chr5 164681735 164681779 -38403753 + MIR SINE MIR 110 152 -110 282 287 11 23 chr5 164681988 164682075 -38403457 + L2 LINE L2 3197 3282 -31 2049 143 10 3 chr5 164682240 164682548 -38402984 + AluJb SINE Alu 1 310 -2 697 240 25 40 chr5 164682945 164683145 -38402387 - MIR SINE MIR -3 259 63 3674 202 52 31 chr5 164684061 164684729 -38400803 - L1ME1 LINE L1 -5 6161 5469 2222 97 0 0 chr5 164684729 164685008 -38400524 - AluSg SINE Alu -1 309 31 3674 202 52 31 chr5 164685008 164685207 -38400325 - L1ME1 LINE L1 -697 5469 5276 216 286 6 65 chr5 164685224 164685392 -38400140 + CT-rich Low_complexity Low_complexity 5 162 0 3722 173 13 0 chr5 164685913 164686584 -38398948 - L1MB7 LINE L1 -17 6167 5488 328 322 11 11 chr5 164687180 164687267 -38398265 - L2 LINE L2 -43 3229 3143 1735 183 24 0 chr5 164687357 164687646 -38397886 - AluJb SINE Alu -16 296 1 216 0 0 0 chr5 164687744 164687768 -38397764 + (TG)n Simple_repeat Simple_repeat 2 25 0 415 313 140 0 chr5 164687787 164688001 -38397531 + MIR SINE MIR 19 262 0 1927 155 0 7 chr5 164688620 164688917 -38396615 + AluJo SINE Alu 1 295 -17 1037 101 0 7 chr5 164689405 164689543 -38395989 - AluSq/x SINE Alu -173 140 4 220 283 170 9 chr5 164690033 164690139 -38395393 - MIR SINE MIR -50 212 90 469 279 115 10 chr5 164690608 164690816 -38394716 + L3 LINE CR1 1020 1249 -328 1705 276 132 22 chr5 164691180 164691544 -38393988 - L2 LINE L2 0 3313 2990 1649 143 0 0 chr5 164691544 164691775 -38393757 + AluSq SINE Alu 3 233 -80 1705 276 132 22 chr5 164691775 164692470 -38393062 - L2 LINE L2 -323 2990 2136 586 212 59 18 chr5 164692470 164692640 -38392892 - L2 LINE L2 -2687 627 451 300 159 0 0 chr5 164692766 164692810 -38392722 + MER94 DNA DNA 2 45 -89 201 133 0 0 chr5 164694940 164694970 -38390562 + (CTG)n Simple_repeat Simple_repeat 3 32 0 468 274 177 9 chr5 164695824 164696039 -38389493 + MIR SINE MIR 4 254 -8 409 244 81 12 chr5 164697989 164698149 -38387383 + MIR SINE MIR 89 259 -3 1468 186 4 12 chr5 164698258 164698510 -38387022 + AluJb SINE Alu 12 261 -51 345 75 0 0 chr5 164698518 164698571 -38386961 + (TC)n Simple_repeat Simple_repeat 2 54 0 189 107 0 0 chr5 164699457 164699485 -38386047 + (A)n Simple_repeat Simple_repeat 1 28 0 495 279 43 12 chr5 164699561 164699722 -38385810 - MIR SINE MIR 0 262 97 203 220 20 20 chr5 164699966 164700016 -38385516 + CT-rich Low_complexity Low_complexity 1 50 0 297 75 0 0 chr5 164700121 164700161 -38385371 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 94 0 0 chr5 164700205 164700237 -38385295 + (CA)n Simple_repeat Simple_repeat 2 33 0 590 284 36 24 chr5 164701066 164701293 -38384239 + MIR SINE MIR 6 234 -28 292 141 14 28 chr5 164701565 164701636 -38383896 + (CACCAT)n Simple_repeat Simple_repeat 4 73 0 582 281 76 17 chr5 164701682 164701920 -38383612 - MIR SINE MIR -5 257 6 692 245 99 43 chr5 164702264 164702546 -38382986 - MER102a DNA MER1_type -32 298 1 188 278 113 61 chr5 164702730 164702845 -38382687 + L2 LINE L2 2964 3084 -188 2252 130 0 0 chr5 164704163 164704470 -38381062 + AluSx SINE Alu 1 307 -5 261 333 20 20 chr5 164704678 164704831 -38380701 + GA-rich Low_complexity Low_complexity 3 155 0 1105 109 0 16 chr5 164705129 164705237 -38380295 + (GAAA)n Simple_repeat Simple_repeat 1 286 0 1105 109 0 16 chr5 164705237 164705420 -38380112 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 750 169 23 0 chr5 164706387 164706517 -38379015 - AluJo SINE Alu -178 134 2 374 325 145 10 chr5 164706518 164706718 -38378814 - MIR SINE MIR -8 254 28 519 249 72 28 chr5 164706868 164707049 -38378483 + MIR SINE MIR 66 254 -8 239 302 23 12 chr5 164708092 164708178 -38377354 - MER5A DNA MER1_type -66 123 37 231 282 28 0 chr5 164708123 164708194 -38377338 + MER5A DNA MER1_type 109 181 -8 * 225 0 0 0 chr5 164710052 164710077 -38375455 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1924 161 0 3 chr5 164710134 164710439 -38375093 - AluJb SINE Alu -8 304 1 269 325 0 0 chr5 164710443 164710551 -38374981 - MIR SINE MIR -70 138 54 533 260 181 3 chr5 164710586 164710801 -38374731 - MIR SINE MIR 0 262 14 415 300 26 81 chr5 164712216 164712489 -38373043 + MIR SINE MIR 3 260 -2 540 259 40 19 chr5 164712647 164712830 -38372702 + MIR SINE MIR 9 191 -63 2275 100 7 0 chr5 164712957 164713248 -38372284 + AluSg SINE Alu 1 293 -17 625 279 63 13 chr5 164713333 164713570 -38371962 + MIR SINE MIR 14 262 0 187 200 83 0 chr5 164713577 164713637 -38371895 - MIR SINE MIR -56 206 142 658 274 130 26 chr5 164714231 164714538 -38370994 - L2 LINE L2 -9 3304 2966 1866 29 0 0 chr5 164714602 164714807 -38370725 - AluY SINE Alu -9 302 98 228 35 0 0 chr5 164715144 164715173 -38370359 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 243 133 0 0 chr5 164715339 164715384 -38370148 + (TC)n Simple_repeat Simple_repeat 1 45 0 451 310 45 0 chr5 164715398 164715553 -38369979 + MIR SINE MIR 7 168 -94 743 234 39 62 chr5 164715811 164716067 -38369465 - MIR SINE MIR 0 262 13 1602 123 119 15 chr5 164716105 164716373 -38369159 + AluSg1 SINE Alu 12 307 -2 1950 185 105 36 chr5 164717963 164718488 -38367044 - L1MC4 LINE L1 0 8042 7482 1749 192 102 25 chr5 164718511 164718943 -38366589 + L1MC4 LINE L1 7010 7474 -568 2309 88 0 0 chr5 164721369 164721663 -38363869 - AluY SINE Alu -17 294 1 665 189 39 0 chr5 164722724 164722877 -38362655 + MIR SINE MIR 74 232 -30 419 196 47 0 chr5 164722879 164722986 -38362546 + MER113 DNA MER1_type? 2 113 -408 249 211 0 67 chr5 164723035 164723086 -38362446 + MER113 DNA MER1_type? 125 169 -352 1878 159 24 0 chr5 164723086 164723375 -38362157 + AluSx SINE Alu 1 296 -16 249 211 0 67 chr5 164723375 164723413 -38362119 + MER113 DNA MER1_type? 169 208 -313 511 303 81 28 chr5 164723414 164723625 -38361907 - MIR SINE MIR -3 259 38 1523 207 98 59 chr5 164723681 164724121 -38361411 - MLT1C LTR MaLR -9 458 2 471 246 142 33 chr5 164724126 164724337 -38361195 + MER113 DNA MER1_type? 263 496 -25 1930 114 85 4 chr5 164724490 164724771 -38360761 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr5 164725420 164725442 -38360090 + AT_rich Low_complexity Low_complexity 1 22 0 890 129 0 0 chr5 164725701 164725825 -38359707 + AluSq/x SINE Alu 1 124 -189 2870 7 0 0 chr5 164726590 164726894 -38358638 - AluYa5 SINE Alu -7 304 1 243 231 0 0 chr5 164727266 164727318 -38358214 - Charlie4 DNA MER1_type -1909 52 1 238 231 28 56 chr5 164727434 164727453 -38358079 - L1MA10 LINE L1 -1 6333 6315 2528 215 52 20 chr5 164727453 164728066 -38357466 - L1ME2 LINE L1 -9 6155 5523 1007 127 0 51 chr5 164728098 164728255 -38357277 - AluJ SINE Alu -26 286 138 1988 128 60 80 chr5 164728255 164728692 -38356840 - MSTA LTR MaLR 0 428 1 634 176 88 24 chr5 164728702 164728827 -38356705 - AluJ SINE Alu -169 133 1 525 177 3 0 chr5 164728828 164728930 -38356602 - L1ME2 LINE L1 -634 5528 5425 1023 226 57 12 chr5 164729918 164730166 -38355366 - MIR SINE MIR -1 261 3 2306 105 3 0 chr5 164730297 164730603 -38354929 - AluSx SINE Alu -5 307 1 746 279 72 50 chr5 164730749 164730817 -38354715 + L1ME3A LINE L1 5214 5279 -891 1984 134 7 3 chr5 164730817 164731140 -38354392 + AluSx SINE Alu 1 324 0 746 279 72 50 chr5 164731140 164731336 -38354196 + L1ME3A LINE L1 5279 5469 -701 2302 95 0 3 chr5 164731336 164731632 -38353900 + AluSq SINE Alu 1 295 -18 746 279 72 50 chr5 164731632 164732056 -38353476 + L1ME3A LINE L1 5469 5926 -244 1631 164 7 22 chr5 164732106 164732380 -38353152 + AluJo SINE Alu 27 296 -16 1101 222 31 35 chr5 164732747 164733100 -38352432 + L1ME4a LINE L1 5459 5809 -357 2391 87 13 0 chr5 164733101 164733401 -38352131 - AluSg SINE Alu -6 304 1 430 245 101 38 chr5 164733508 164733745 -38351787 + L1ME4a LINE L1 5863 6114 -7 346 318 13 26 chr5 164733970 164734121 -38351411 + L3 LINE CR1 1426 1574 -3 268 287 99 0 chr5 164734176 164734277 -38351255 - L2 LINE L2 -6 3307 3197 256 270 198 50 chr5 164734470 164734623 -38350909 + L2 LINE L2 2987 3116 -197 255 22 22 43 chr5 164734623 164734669 -38350863 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 2010 103 15 7 chr5 164734673 164734946 -38350586 - AluSx SINE Alu -37 275 1 256 270 198 50 chr5 164734946 164735065 -38350467 + L2 LINE L2 3118 3305 -8 1669 165 66 29 chr5 164736535 164736953 -38348579 - MLT1C LTR MaLR 0 467 6 439 314 93 12 chr5 164737034 164737206 -38348326 - MIR SINE MIR -74 188 3 1244 253 143 21 chr5 164737930 164738491 -38347041 - L1ME4a LINE L1 -3 6118 5490 215 312 108 0 chr5 164739128 164739221 -38346311 + MIR SINE MIR 13 115 -147 2344 101 3 0 chr5 164739949 164740247 -38345285 + AluSg SINE Alu 5 303 -7 295 351 18 0 chr5 164740519 164740633 -38344899 + MER5A DNA MER1_type 53 168 -21 22 0 0 0 chr5 164741219 164741241 -38344291 + AT_rich Low_complexity Low_complexity 1 22 0 1038 236 88 51 chr5 164741332 164741482 -38344050 + MLT1B LTR MaLR 4 147 -243 2100 142 10 0 chr5 164741482 164741785 -38343747 + AluJb SINE Alu 1 306 -6 1038 236 88 51 chr5 164741785 164742007 -38343525 + MLT1B LTR MaLR 147 390 0 1528 126 0 13 chr5 164742609 164742839 -38342693 - AluJo SINE Alu 0 312 86 366 248 91 16 chr5 164743636 164743728 -38341804 + AluJo/FLAM SINE Alu 1 106 -196 2169 132 3 0 chr5 164743728 164744024 -38341508 - AluSq SINE Alu -16 297 1 366 248 91 16 chr5 164744024 164744052 -38341480 + AluJo/FLAM SINE Alu 106 130 -172 603 214 9 0 chr5 164744059 164744171 -38341361 + MER81 DNA DNA 2 114 0 448 233 45 30 chr5 164745947 164746080 -38339452 + L2 LINE L2 3176 3310 -3 225 0 0 0 chr5 164746144 164746169 -38339363 + (A)n Simple_repeat Simple_repeat 1 25 0 266 249 48 37 chr5 164746322 164746576 -38338956 + L1MC5 LINE L1 7082 7340 -702 786 141 154 7 chr5 164746732 164746881 -38338651 + MSTA LTR MaLR 253 423 -5 2263 122 3 3 chr5 164746881 164747193 -38338339 + AluSx SINE Alu 1 312 0 200 253 190 0 chr5 164747403 164747482 -38338050 + MIR SINE MIR 43 136 -72 * 256 170 0 38 chr5 164747480 164747533 -38337999 + L2 LINE L2 2885 2935 -379 830 188 19 56 chr5 164747559 164747796 -38337736 + L1MC/D LINE L1 5587 5817 -425 205 220 20 20 chr5 164747796 164747846 -38337686 + GA-rich Low_complexity Low_complexity 3 52 0 2596 62 0 7 chr5 164747846 164748155 -38337377 - AluY SINE Alu -3 308 2 1213 168 86 47 chr5 164748176 164748408 -38337124 - AluJo SINE Alu -71 241 1 1191 150 0 6 chr5 164748547 164748727 -38336805 + AluJb SINE Alu 129 301 -11 2146 231 111 61 chr5 164748766 164749421 -38336111 + L1MC4 LINE L1 6306 6927 -1115 1922 172 0 6 chr5 164749421 164749735 -38335797 + AluSx SINE Alu 1 312 0 2146 231 111 61 chr5 164749735 164749915 -38335617 + L1MC4 LINE L1 6927 7097 -945 1945 173 37 0 chr5 164749915 164750267 -38335265 - MLT1A1 LTR MaLR 0 365 1 2146 231 111 61 chr5 164750267 164750851 -38334681 + L1MC4 LINE L1 7097 7905 -137 1067 245 36 17 chr5 164750854 164751246 -38334286 + L1MD3 LINE L1 7638 7995 0 306 219 58 36 chr5 164751259 164751396 -38334136 + L1M4 LINE L1 2252 2391 -3755 2070 76 0 40 chr5 164751400 164751533 -38333999 + AluSg SINE Alu 1 119 -191 1044 67 60 7 chr5 164751533 164751707 -38333825 + L1PA2 LINE L1 5996 6155 0 2070 76 0 40 chr5 164751707 164751850 -38333682 + AluSg SINE Alu 119 266 -44 532 275 86 3 chr5 164751852 164752176 -38333356 + L1M4 LINE L1 2394 2744 -3402 736 281 67 13 chr5 164753025 164753263 -38332269 - MIR SINE MIR -10 252 2 192 40 0 0 chr5 164753624 164753649 -38331883 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2149 111 4 0 chr5 164753649 164753929 -38331603 - AluSq SINE Alu -32 281 1 1958 135 3 7 chr5 164755018 164755324 -38330208 + AluSq SINE Alu 2 306 0 2155 118 3 3 chr5 164755329 164755633 -38329899 + AluSc SINE Alu 1 304 -5 252 0 0 0 chr5 164756147 164756175 -38329357 + (A)n Simple_repeat Simple_repeat 1 28 0 2185 94 0 0 chr5 164806523 164806798 -38278734 + AluSx SINE Alu 1 275 -37 269 0 56 0 chr5 164806802 164806838 -38278694 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 630 294 71 29 chr5 164806841 164807151 -38278381 - L2 LINE L2 -78 3235 2913 806 177 0 7 chr5 164807153 164807294 -38278238 - AluJb SINE Alu -5 307 168 303 294 118 6 chr5 164807333 164807503 -38278029 + L2 LINE L2 1330 1518 -1796 288 248 62 153 chr5 164807620 164807720 -38277812 - L2 LINE L2 -159 3154 3047 1406 160 93 15 chr5 164807720 164807989 -38277543 - AluJb SINE Alu -20 292 3 2127 85 3 7 chr5 164807996 164808314 -38277218 - AluSc SINE Alu 0 317 1 288 248 62 153 chr5 164808314 164808445 -38277087 - L2 LINE L2 -272 3041 2935 662 164 0 0 chr5 164808455 164808565 -38276967 + MER20 DNA MER1_type 110 219 0 315 326 0 0 chr5 164808565 164808654 -38276878 - MIR3 SINE MIR -48 160 72 1729 140 95 3 chr5 164808850 164809135 -38276397 - AluSx SINE Alu -1 311 1 720 153 0 32 chr5 164809138 164809262 -38276270 - FRAM SINE Alu -17 159 40 1641 181 0 17 chr5 164809483 164809770 -38275762 + AluJb SINE Alu 1 282 -30 340 116 23 105 chr5 164809837 164809923 -38275609 + ORSL DNA AcHobo 12 90 -185 1820 109 0 0 chr5 164809925 164810163 -38275369 + AluSx SINE Alu 1 238 -74 241 324 15 0 chr5 164810351 164810419 -38275113 + L3 LINE CR1 1369 1437 -140 2227 97 0 7 chr5 164810842 164811140 -38274392 - AluSg SINE Alu -14 296 1 2028 129 16 7 chr5 164811254 164811557 -38273975 - AluSq SINE Alu -7 306 1 253 300 0 0 chr5 164811718 164811778 -38273754 + MER91 DNA MER1_type 131 190 0 222 378 0 0 chr5 164811899 164811981 -38273551 + L3 LINE CR1 1494 1575 -2 1955 140 20 7 chr5 164812203 164812496 -38273036 + AluSg SINE Alu 1 297 -13 2109 141 0 6 chr5 164812803 164813115 -38272417 + AluSx SINE Alu 1 310 -2 2317 99 3 10 chr5 164813417 164813731 -38271801 + AluSx SINE Alu 1 312 0 1065 77 21 21 chr5 164813949 164814092 -38271440 + AluY SINE Alu 1 143 -168 543 310 11 21 chr5 164814227 164814414 -38271118 + MIR SINE MIR 3 187 -75 853 163 0 0 chr5 164814414 164814537 -38270995 + AluJb SINE Alu 1 123 -189 1649 169 4 0 chr5 164814551 164814817 -38270715 + AluJo SINE Alu 2 268 -44 1960 112 34 17 chr5 164814876 164815170 -38270362 + AluSx SINE Alu 1 299 -13 2326 64 40 3 chr5 164815170 164815467 -38270065 + AluY SINE Alu 1 308 -3 1813 183 10 7 chr5 164815483 164815784 -38269748 + AluJo SINE Alu 1 302 -10 2358 98 7 0 chr5 164815784 164816091 -38269441 + AluSc SINE Alu 1 309 0 252 200 59 71 chr5 164816094 164816179 -38269353 + MIR SINE MIR 179 262 0 319 253 0 0 chr5 164816195 164816274 -38269258 + HsTC2 DNA Tc2 1 79 -1819 1648 96 0 0 chr5 164816797 164817016 -38268516 + AluY SINE Alu 1 219 -92 571 279 113 50 chr5 164817121 164817174 -38268358 - L2 LINE L2 -556 2758 2710 2470 94 0 0 chr5 164817174 164817483 -38268049 - AluSq SINE Alu -4 309 1 571 279 113 50 chr5 164817483 164817651 -38267881 - L2 LINE L2 -604 2710 2523 518 232 196 45 chr5 164817752 164817972 -38267560 + MIR SINE MIR 10 262 0 2191 138 0 10 chr5 164818158 164818469 -38267063 - AluSx SINE Alu -4 308 1 180 0 0 0 chr5 164818475 164818495 -38267037 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2237 93 3 0 chr5 164818498 164818787 -38266745 - AluSp SINE Alu -23 290 1 2464 65 0 3 chr5 164819195 164819504 -38266028 - AluY SINE Alu -3 308 1 609 329 30 0 chr5 164819610 164819844 -38265688 + MIR SINE MIR 12 252 -10 653 133 0 9 chr5 164819849 164819962 -38265570 + (GGGA)n Simple_repeat Simple_repeat 1 112 0 215 268 0 12 chr5 164820435 164820517 -38265015 + GA-rich Low_complexity Low_complexity 1 81 0 2160 100 4 0 chr5 164820536 164820841 -38264691 + AluSq SINE Alu 1 306 0 249 284 201 52 chr5 164821091 164821225 -38264307 + MIR SINE MIR 11 164 -98 1158 199 0 0 chr5 164821288 164821479 -38264053 - AluJb SINE Alu -15 297 107 633 278 33 21 chr5 164821967 164822172 -38263360 + MIR SINE MIR 3 208 -54 250 381 35 23 chr5 164822298 164822471 -38263061 - MIR3 SINE MIR -14 194 20 578 264 110 0 chr5 164822978 164823160 -38262372 - MIR SINE MIR -7 255 54 4201 80 2 0 chr5 164823637 164824201 -38261331 + L1PA7 LINE L1 5587 6151 -3 389 326 45 34 chr5 164824514 164824692 -38260840 + MIR3 SINE MIR 26 205 -3 23 78 0 0 chr5 164825320 164825371 -38260161 + AT_rich Low_complexity Low_complexity 1 51 0 213 39 0 0 chr5 164827219 164827245 -38258287 + (CA)n Simple_repeat Simple_repeat 2 27 0 698 302 16 20 chr5 164827706 164827954 -38257578 - MIR SINE MIR -5 257 11 920 210 30 10 chr5 164828059 164828259 -38257273 + MER20 DNA MER1_type 16 219 0 218 128 0 43 chr5 164830500 164830547 -38254985 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 21 36 0 0 chr5 164831622 164831650 -38253882 + AT_rich Low_complexity Low_complexity 1 28 0 2039 145 16 0 chr5 164833703 164834006 -38251526 - AluJo SINE Alu -4 308 1 663 81 0 0 chr5 164834243 164834329 -38251203 + AluSg1 SINE Alu 1 86 -223 1232 160 21 0 chr5 164834429 164834623 -38250909 + AluY SINE Alu 103 300 -11 773 323 15 8 chr5 164834825 164835085 -38250447 + MIR SINE MIR 1 262 0 225 132 0 0 chr5 164835104 164835142 -38250390 + (A)n Simple_repeat Simple_repeat 1 38 0 280 176 203 0 chr5 164835926 164836000 -38249532 + L1MC/D LINE L1 5732 5820 -1988 2085 108 4 0 chr5 164836143 164836420 -38249112 - AluSp SINE Alu -12 301 24 2072 112 0 0 chr5 164836837 164837123 -38248409 + AluSg1 SINE Alu 1 286 -23 441 221 0 0 chr5 164837126 164837230 -38248302 + (CATATA)n Simple_repeat Simple_repeat 2 105 0 458 294 108 33 chr5 164837472 164837686 -38247846 + MIR SINE MIR 16 245 -17 1664 172 41 3 chr5 164837833 164838123 -38247409 + AluJb SINE Alu 1 301 -11 2358 91 3 0 chr5 164838190 164838487 -38247045 + AluSq SINE Alu 1 298 -15 674 138 110 0 chr5 164838487 164838596 -38246936 + AluSc SINE Alu 169 289 -20 25 51 0 0 chr5 164839399 164839438 -38246094 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 164839987 164840009 -38245523 + AT_rich Low_complexity Low_complexity 1 22 0 2341 94 0 10 chr5 164840028 164840335 -38245197 + AluSx SINE Alu 1 304 -8 1730 158 19 35 chr5 164841381 164841692 -38243840 - AluJb SINE Alu -6 306 1 2337 259 109 79 chr5 164842066 164842394 -38243138 + HAL1 LINE L1 1 318 -2189 1869 82 107 14 chr5 164842394 164842675 -38242857 + AluSp SINE Alu 1 307 -6 2337 259 109 79 chr5 164842675 164842761 -38242771 + HAL1 LINE L1 318 400 -2107 261 98 0 0 chr5 164842761 164842802 -38242730 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 2337 259 109 79 chr5 164842802 164843031 -38242501 + HAL1 LINE L1 400 621 -1886 2001 134 24 0 chr5 164843031 164843321 -38242211 - AluSx SINE Alu -15 297 1 2337 259 109 79 chr5 164843321 164843596 -38241936 + HAL1 LINE L1 621 886 -1621 687 167 23 23 chr5 164843596 164843728 -38241804 + FLAM_A SINE Alu 1 132 -1 2337 259 109 79 chr5 164843728 164844815 -38240717 + HAL1 LINE L1 886 2070 -437 2376 86 3 0 chr5 164845103 164845395 -38240137 + AluSp SINE Alu 1 293 -20 1232 127 0 21 chr5 164846767 164846956 -38238576 + AluSg/x SINE Alu 118 302 -10 2000 128 0 4 chr5 164846965 164847246 -38238286 + AluSx SINE Alu 1 280 -32 459 0 0 0 chr5 164847252 164847303 -38238229 + (CA)n Simple_repeat Simple_repeat 2 52 0 670 228 50 56 chr5 164847313 164847493 -38238039 + MIR SINE MIR 33 211 -51 2174 121 21 24 chr5 164848647 164848985 -38236547 + MER1B DNA MER1_type 1 337 0 1129 143 56 17 chr5 164850411 164850495 -38235037 + L1MA8 LINE L1 6048 6127 -164 966 204 0 18 chr5 164850495 164850662 -38234870 - FAM SINE Alu -9 166 3 1129 143 56 17 chr5 164850662 164850808 -38234724 + L1MA8 LINE L1 6127 6287 -4 1590 108 5 5 chr5 164850816 164851038 -38234494 + AluSx SINE Alu 1 222 -90 892 250 62 20 chr5 164851253 164851545 -38233987 + L1MC3 LINE L1 5702 6005 -1803 21 36 0 0 chr5 164851691 164851719 -38233813 + AT_rich Low_complexity Low_complexity 1 28 0 2243 94 10 7 chr5 164851788 164852096 -38233436 + AluSq SINE Alu 1 309 -4 1455 195 74 21 chr5 164852312 164852677 -38232855 + L1ME3 LINE L1 5768 6141 -21 318 333 63 6 chr5 164853498 164853657 -38231875 + MIR SINE MIR 53 220 -42 447 222 7 90 chr5 164854128 164854191 -38231341 - MER5A DNA MER1_type -2 187 141 2479 61 0 0 chr5 164854191 164854486 -38231046 + AluY SINE Alu 1 295 -16 447 222 7 90 chr5 164854486 164854566 -38230966 - MER5A DNA MER1_type -48 141 56 1273 141 15 20 chr5 164855530 164855728 -38229804 - AluJo SINE Alu -111 201 5 14674 128 38 22 chr5 164856397 164856843 -38228689 - Tigger1 DNA MER2_type 0 2418 1981 2325 68 0 74 chr5 164856843 164857166 -38228366 + AluSp SINE Alu 1 299 -14 14674 128 38 22 chr5 164857166 164858233 -38227299 - Tigger1 DNA MER2_type -437 1981 933 1887 126 26 0 chr5 164858233 164858503 -38227029 - AluSq SINE Alu -34 279 3 14674 128 38 22 chr5 164858503 164858801 -38226731 - Tigger1 DNA MER2_type -1485 933 641 2383 98 0 0 chr5 164858801 164859107 -38226425 + AluSx SINE Alu 1 306 -6 14674 128 38 22 chr5 164859107 164859659 -38225873 - Tigger1 DNA MER2_type -1777 641 14 389 243 109 59 chr5 164860282 164860450 -38225082 + L1MC3 LINE L1 5976 6134 -32 2073 123 3 7 chr5 164860451 164860759 -38224773 + AluSg SINE Alu 1 307 -3 1224 152 0 0 chr5 164860769 164860947 -38224585 + AluSg/x SINE Alu 124 301 -11 5300 196 70 90 chr5 164860972 164861824 -38223708 + L1MC4a LINE L1 6166 6969 -839 631 228 49 0 chr5 164861824 164861947 -38223585 + FLAM_A SINE Alu 1 129 -4 5300 196 70 90 chr5 164861947 164862765 -38222767 + L1MC4a LINE L1 6969 7802 -6 2333 56 31 0 chr5 164862801 164863088 -38222444 - AluY SINE Alu -15 296 1 1416 115 118 80 chr5 164863090 164863378 -38222154 - AluSg SINE Alu -1 299 1 199 354 15 0 chr5 164863420 164863485 -38222047 - L2 LINE L2 -27 3245 3180 1748 133 43 36 chr5 164863810 164864112 -38221420 + AluSx SINE Alu 1 304 -8 1316 46 0 0 chr5 164864319 164864472 -38221060 + L1PA5 LINE L1 6002 6154 0 219 36 0 0 chr5 164864499 164864527 -38221005 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 268 235 32 17 chr5 164864598 164864676 -38220856 - MIR SINE MIR -95 113 37 823 249 107 33 chr5 164864817 164864933 -38220599 + L1MC4 LINE L1 7171 7277 -765 2342 103 0 7 chr5 164864933 164865243 -38220289 - AluSq SINE Alu -5 308 1 823 249 107 33 chr5 164865243 164865520 -38220012 + L1MC4 LINE L1 7277 7593 -449 413 121 0 0 chr5 164865644 164865710 -38219822 + Alu SINE Alu 243 308 -3 373 270 22 15 chr5 164865727 164865864 -38219668 + L1MC4 LINE L1 7904 8041 -1 2172 109 0 0 chr5 164865874 164866193 -38219339 + AluSq SINE Alu 1 319 0 21 0 0 0 chr5 164866796 164866817 -38218715 + AT_rich Low_complexity Low_complexity 1 21 0 30 34 0 34 chr5 164866999 164867035 -38218497 + AT_rich Low_complexity Low_complexity 1 36 -21 2357 107 0 0 chr5 164867035 164867343 -38218189 + AluSc SINE Alu 1 308 -1 30 34 0 34 chr5 164867343 164867365 -38218167 + AT_rich Low_complexity Low_complexity 36 57 0 28 29 0 0 chr5 164867680 164867715 -38217817 + AT_rich Low_complexity Low_complexity 1 35 0 1799 124 37 47 chr5 164867865 164868163 -38217369 + AluSx SINE Alu 1 295 -17 24 0 0 0 chr5 164868339 164868363 -38217169 + AT_rich Low_complexity Low_complexity 1 24 0 249 176 44 29 chr5 164868684 164868752 -38216780 - L1MC4a LINE L1 -1878 5930 5862 243 0 0 0 chr5 164868944 164868971 -38216561 + (A)n Simple_repeat Simple_repeat 1 27 0 1007 127 32 0 chr5 164868976 164869134 -38216398 + AluSp SINE Alu 5 167 -146 2450 79 0 0 chr5 164869598 164869903 -38215629 + AluY SINE Alu 1 305 -6 189 0 0 0 chr5 164869903 164869924 -38215608 + (TA)n Simple_repeat Simple_repeat 1 21 0 2112 103 7 0 chr5 164870233 164870523 -38215009 + AluSx SINE Alu 1 292 -20 355 173 17 3 chr5 164870687 164870796 -38214736 + Alu SINE Alu 1 50 -252 1941 87 0 0 chr5 164870896 164871149 -38214383 - AluSx SINE Alu -59 253 1 2096 110 3 0 chr5 164871989 164872281 -38213251 - AluY SINE Alu -18 293 1 2377 72 0 0 chr5 164872291 164872583 -38212949 - AluSc SINE Alu -17 292 1 2039 118 24 0 chr5 164872667 164872956 -38212576 + AluSx SINE Alu 1 296 -16 2240 101 3 0 chr5 164872960 164873258 -38212274 + AluSg SINE Alu 1 299 -11 562 107 0 0 chr5 164873286 164873370 -38212162 - MER3 DNA MER1_type -6 203 120 967 167 0 0 chr5 164873370 164873540 -38211992 + AluSg/x SINE Alu 135 304 0 2016 131 0 35 chr5 164873548 164873861 -38211671 + AluSx SINE Alu 1 302 -10 189 74 0 0 chr5 164874006 164874033 -38211499 + (CA)n Simple_repeat Simple_repeat 2 28 0 243 259 0 0 chr5 164874095 164874149 -38211383 + L2 LINE L2 3255 3308 -5 339 354 174 20 chr5 164874259 164874454 -38211078 + L2 LINE L2 3047 3271 -1 476 225 53 46 chr5 164874579 164874730 -38210802 - L2 LINE L2 -4 3309 3158 1563 144 16 83 chr5 164874810 164874948 -38210584 + AluJb SINE Alu 3 110 -202 2192 118 0 3 chr5 164874948 164875244 -38210288 + AluSg SINE Alu 1 295 -15 1563 144 16 83 chr5 164875244 164875417 -38210115 + AluJb SINE Alu 110 293 -19 2434 59 3 0 chr5 164875418 164875701 -38209831 + AluY SINE Alu 1 287 -24 354 23 0 0 chr5 164875701 164875744 -38209788 + (CA)n Simple_repeat Simple_repeat 2 44 0 382 244 11 11 chr5 164875788 164875878 -38209654 - L2 LINE L2 -1 3312 3223 2508 74 3 0 chr5 164875880 164876190 -38209342 + AluY SINE Alu 1 311 0 775 147 0 0 chr5 164876202 164876311 -38209221 + AluSq/x SINE Alu 1 109 -204 1702 216 29 45 chr5 164876442 164876511 -38209021 - MLT1F LTR MaLR 0 542 473 2254 95 0 0 chr5 164876511 164876826 -38208706 + AluSq SINE Alu 1 315 0 872 137 0 8 chr5 164876829 164876953 -38208579 - FLAM_A SINE Alu -10 123 1 1702 216 29 45 chr5 164876953 164877356 -38208176 - MLT1F LTR MaLR -71 471 1 1756 246 116 39 chr5 164877356 164877765 -38207767 + L2 LINE L2 2316 2692 -621 2312 102 7 0 chr5 164877765 164878070 -38207462 + AluSg SINE Alu 1 307 -3 1756 246 116 39 chr5 164878070 164878099 -38207433 + L2 LINE L2 2692 2717 -596 1749 188 14 0 chr5 164878099 164878391 -38207141 - AluJb SINE Alu -15 297 2 1756 246 116 39 chr5 164878391 164878848 -38206684 + L2 LINE L2 2717 3304 -9 183 254 0 34 chr5 164878864 164878923 -38206609 + MIR SINE MIR 176 232 -30 1718 163 3 7 chr5 164879326 164879614 -38205918 - AluJo SINE Alu -16 296 10 601 170 89 3 chr5 164879631 164879854 -38205678 - AluJb SINE Alu -9 303 4 1990 108 59 11 chr5 164879867 164880153 -38205379 - AluSx SINE Alu -12 300 1 679 168 0 96 chr5 164880160 164880263 -38205269 - L1MD1 LINE L1 -11 6231 6148 779 208 0 0 chr5 164880263 164880388 -38205144 - FLAM_A SINE Alu -7 126 2 679 168 0 96 chr5 164880388 164880451 -38205081 - L1MD1 LINE L1 -94 6148 6081 351 0 0 0 chr5 164880464 164880503 -38205029 + (TG)n Simple_repeat Simple_repeat 2 40 0 8710 104 19 26 chr5 164880537 164881485 -38204047 + HSMAR2 DNA Mariner 7 945 -357 2338 84 7 0 chr5 164881485 164881782 -38203750 + AluYa5 SINE Alu 1 299 -12 8710 104 19 26 chr5 164881782 164882137 -38203395 + HSMAR2 DNA Mariner 945 1301 -1 583 168 24 8 chr5 164882205 164882330 -38203202 - L1MD2 LINE L1 -224 6135 6009 511 211 19 0 chr5 164882351 164882455 -38203077 - MLT1F1 LTR MaLR -279 288 183 1068 171 11 0 chr5 164882456 164882668 -38202864 - AluSg/x SINE Alu 0 310 124 295 276 110 35 chr5 164882739 164882884 -38202648 + MIR3 SINE MIR 3 158 -50 320 273 34 0 chr5 164882941 164883029 -38202503 + MER58B DNA MER1_type 2 92 -249 1930 104 0 81 chr5 164883050 164883199 -38202333 - AluSx SINE Alu -30 282 169 2305 98 0 0 chr5 164883199 164883494 -38202038 - AluSg SINE Alu -15 295 1 1930 104 0 81 chr5 164883494 164883651 -38201881 - AluSx SINE Alu -143 169 1 1867 88 88 15 chr5 164883656 164883929 -38201603 - AluSq SINE Alu -20 293 1 832 194 85 36 chr5 164883934 164884181 -38201351 + MER58B DNA MER1_type 83 341 0 310 247 37 0 chr5 164884320 164884401 -38201131 + L2 LINE L2 3184 3267 -5 2276 82 0 0 chr5 164886593 164886885 -38198647 - AluSx SINE Alu -20 292 1 2150 119 0 3 chr5 164887426 164887728 -38197804 + AluSg SINE Alu 1 301 -9 1982 130 0 7 chr5 164888259 164888570 -38196962 - AluSq SINE Alu 0 309 1 2104 97 34 7 chr5 164888902 164889200 -38196332 - AluSg SINE Alu -4 306 1 2279 76 48 0 chr5 164889342 164889632 -38195900 - AluSx SINE Alu -8 304 1 2507 73 3 0 chr5 164889639 164889942 -38195590 - AluSg SINE Alu -6 304 1 26 50 0 0 chr5 164890525 164890565 -38194967 + AT_rich Low_complexity Low_complexity 1 40 0 194 355 0 0 chr5 164890698 164890760 -38194772 + MIR SINE MIR 54 115 -93 342 318 142 7 chr5 164891757 164891905 -38193627 + L2 LINE L2 3104 3271 -1 304 91 45 0 chr5 164892146 164892190 -38193342 + MLT1A1 LTR MaLR 1 46 -319 902 129 45 129 chr5 164892231 164892354 -38193178 + MLT1A1 LTR MaLR 179 311 -54 2495 63 0 0 chr5 164892354 164892655 -38192877 + AluY SINE Alu 1 301 -10 902 129 45 129 chr5 164892655 164892678 -38192854 + MLT1A1 LTR MaLR 311 334 -31 1822 158 0 26 chr5 164892678 164892982 -38192550 + AluJb SINE Alu 1 296 -16 902 129 45 129 chr5 164892982 164893036 -38192496 + MLT1A1 LTR MaLR 334 363 -2 2072 88 71 10 chr5 164893154 164893449 -38192083 - AluSp SINE Alu 0 313 1 2298 79 0 0 chr5 164893761 164894041 -38191491 - AluSg SINE Alu -30 280 1 1916 155 0 17 chr5 164894045 164894341 -38191191 - AluJo SINE Alu -21 291 1 201 121 0 0 chr5 164894371 164894404 -38191128 + (TTATA)n Simple_repeat Simple_repeat 5 37 0 1086 125 6 25 chr5 164894409 164894569 -38190963 - AluSq SINE Alu -24 289 133 23 0 0 0 chr5 164894661 164894684 -38190848 + AT_rich Low_complexity Low_complexity 1 23 0 2306 93 13 0 chr5 164894784 164895086 -38190446 - AluSp SINE Alu -7 306 1 2156 123 0 0 chr5 164896737 164897037 -38188495 - AluSx SINE Alu -12 300 1 2265 83 10 0 chr5 164897445 164897735 -38187797 - AluSg SINE Alu -17 293 1 1320 177 136 4 chr5 164897746 164898011 -38187521 - AluJb SINE Alu -12 300 1 842 127 95 25 chr5 164898056 164898260 -38187272 - L1MA9 LINE L1 -1 6290 6085 1878 163 13 0 chr5 164898341 164898641 -38186891 - AluJo SINE Alu -8 304 1 2256 95 0 0 chr5 164898660 164898954 -38186578 - AluSx SINE Alu -18 294 1 956 141 0 7 chr5 164899152 164899301 -38186231 - FRAM SINE Alu -2 174 27 1862 151 11 0 chr5 164899432 164899745 -38185787 - AluJb SINE Alu 0 316 1 699 295 101 19 chr5 164901232 164901550 -38183982 + L2 LINE L2 2776 3120 -193 24 0 0 0 chr5 164901557 164901581 -38183951 + AT_rich Low_complexity Low_complexity 1 24 0 650 188 23 15 chr5 164901587 164901720 -38183812 - AluJo SINE Alu -178 134 1 261 264 221 0 chr5 164901720 164901883 -38183649 + L2 LINE L2 3108 3306 -7 2348 72 3 3 chr5 164901883 164902176 -38183356 + AluSc SINE Alu 1 293 -16 219 69 0 0 chr5 164902176 164902205 -38183327 + (TA)n Simple_repeat Simple_repeat 1 29 0 268 66 0 21 chr5 164902622 164902848 -38182684 + AluYb8 SINE Alu 1 295 -6 925 133 57 71 chr5 164903008 164903127 -38182405 + MER3 DNA MER1_type 2 118 -91 2259 107 7 0 chr5 164903127 164903418 -38182114 - AluSq SINE Alu -20 293 1 925 133 57 71 chr5 164903418 164903508 -38182024 + MER3 DNA MER1_type 118 208 -1 22 35 0 0 chr5 164903568 164903597 -38181935 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr5 164903614 164903642 -38181890 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 164903749 164903778 -38181754 + AT_rich Low_complexity Low_complexity 1 29 0 2381 102 0 0 chr5 164904088 164904392 -38181140 + AluSx SINE Alu 1 304 -8 617 246 109 9 chr5 164904733 164905051 -38180481 - L1MC4a LINE L1 -1942 5866 5466 404 222 269 38 chr5 164905775 164905987 -38179545 + MIR SINE MIR 1 261 -1 26 50 0 0 chr5 164906041 164906081 -38179451 + AT_rich Low_complexity Low_complexity 1 40 0 2217 123 3 3 chr5 164906086 164906386 -38179146 + AluSq SINE Alu 1 300 -13 341 196 206 0 chr5 164906435 164906527 -38179005 - FLAM_C SINE Alu -3 130 20 536 261 29 37 chr5 164906548 164906793 -38178739 - L1MC4 LINE L1 -106 7936 7694 867 148 0 0 chr5 164906815 164906943 -38178589 - FLAM_C SINE Alu -10 133 6 2297 106 3 10 chr5 164907239 164907550 -38177982 - AluSg SINE Alu -1 309 1 1881 144 3 17 chr5 164907560 164907851 -38177681 - AluSx SINE Alu -23 289 3 2201 125 0 7 chr5 164908062 164908366 -38177166 - AluSq SINE Alu -11 302 1 418 191 99 14 chr5 164908919 164909060 -38176472 - L1MC5 LINE L1 -464 7497 7345 638 133 0 0 chr5 164909347 164909452 -38176080 + AluSg/x SINE Alu 203 307 -2 2357 98 10 0 chr5 164909961 164910267 -38175265 - AluSx SINE Alu -3 309 1 1609 188 3 38 chr5 164910278 164910598 -38174934 - AluJo SINE Alu -3 309 1 216 158 0 53 chr5 164910852 164910909 -38174623 + CT-rich Low_complexity Low_complexity 4 57 0 876 97 0 0 chr5 164912693 164912839 -38172693 - AluSx SINE Alu 0 314 169 1163 115 0 0 chr5 164912929 164913085 -38172447 - AluSx SINE Alu -151 161 6 207 0 0 0 chr5 164913298 164913321 -38172211 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2040 105 18 0 chr5 164913324 164913601 -38171931 - AluSx SINE Alu -30 282 1 290 286 44 20 chr5 164913720 164913923 -38171609 - L1MC5 LINE L1 -35 7926 7719 427 273 26 38 chr5 164914107 164914250 -38171282 - L1MC4a LINE L1 -1866 5942 5802 2361 102 0 0 chr5 164914250 164914553 -38170979 - AluSc SINE Alu -6 303 1 427 273 26 38 chr5 164914553 164914673 -38170859 - L1MC4a LINE L1 -2006 5802 5682 21 36 0 0 chr5 164915699 164915727 -38169805 + AT_rich Low_complexity Low_complexity 1 28 0 849 141 0 16 chr5 164915728 164915856 -38169676 - FLAM_C SINE Alu -7 126 1 394 240 24 135 chr5 164915952 164916248 -38169284 - L1MC5 LINE L1 -40 7921 7659 1868 156 7 0 chr5 164916439 164916776 -38168756 + AluJb SINE Alu 1 339 0 1792 176 0 0 chr5 164916973 164917262 -38168270 + AluJb SINE Alu 1 289 -23 1842 138 6 38 chr5 164917371 164917689 -38167843 - AluJb SINE Alu -4 308 1 317 323 92 6 chr5 164917870 164918034 -38167498 - L1MC4 LINE L1 -1 8041 7864 495 169 16 48 chr5 164918072 164918196 -38167336 - L1ME2 LINE L1 -115 6049 5930 2178 122 14 0 chr5 164918325 164918619 -38166913 - AluSx SINE Alu -14 298 1 2374 85 3 0 chr5 164918630 164918936 -38166596 - AluSp SINE Alu -6 307 1 2361 102 0 0 chr5 164919391 164919686 -38165846 - AluSx SINE Alu -17 295 1 2207 104 3 0 chr5 164919925 164920224 -38165308 + AluSx SINE Alu 1 300 -12 870 213 79 10 chr5 164920503 164920705 -38164827 + MIR SINE MIR 46 261 -1 200 395 156 10 chr5 164920733 164921118 -38164414 + L2 LINE L2 2329 2769 -545 1980 160 13 7 chr5 164921166 164921473 -38164059 - AluSx SINE Alu -1 311 3 1960 147 10 10 chr5 164921475 164921782 -38163750 - AluJb SINE Alu -5 307 1 468 51 0 0 chr5 164921996 164922055 -38163477 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 2076 116 0 0 chr5 164922056 164922332 -38163200 - AluSx SINE Alu -36 276 1 233 293 0 0 chr5 164922642 164922717 -38162815 - L1MC5 LINE L1 -81 7880 7806 430 244 12 0 chr5 164923010 164923092 -38162440 - L2 LINE L2 -4 3268 3186 1577 137 95 0 chr5 164923201 164923464 -38162068 - AluSx SINE Alu -24 288 1 29 28 0 0 chr5 164923641 164923677 -38161855 + AT_rich Low_complexity Low_complexity 1 36 0 698 187 183 97 chr5 164923683 164923940 -38161592 - AluJo SINE Alu -33 279 1 2122 118 0 13 chr5 164924299 164924603 -38160929 - AluSx SINE Alu -12 300 1 2246 105 0 0 chr5 164924689 164925005 -38160527 + AluSq SINE Alu 1 316 0 1057 172 0 20 chr5 164925096 164925300 -38160232 + MER46A DNA MER2_type 34 233 -3 21 0 0 0 chr5 164925451 164925472 -38160060 + AT_rich Low_complexity Low_complexity 1 21 0 634 217 66 46 chr5 164925919 164926071 -38159461 + FRAM SINE Alu 1 155 -11 1505 203 17 17 chr5 164926252 164926547 -38158985 - AluJo SINE Alu -17 295 1 189 0 0 0 chr5 164926565 164926586 -38158946 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1396 213 29 4 chr5 164926588 164926860 -38158672 - AluJo SINE Alu -21 291 13 249 262 0 0 chr5 164926897 164926958 -38158574 - U7 snRNA snRNA -1 62 2 1138 186 0 28 chr5 164927418 164927633 -38157899 + MER1B DNA MER1_type 131 339 0 863 194 6 34 chr5 164928236 164928411 -38157121 + FAM SINE Alu 1 170 -5 322 217 87 58 chr5 164928422 164928560 -38156972 - L1MC5 LINE L1 -48 7913 7772 1982 161 0 0 chr5 164928570 164928869 -38156663 - AluJo SINE Alu -13 299 1 1468 196 55 147 chr5 164928926 164930113 -38155419 - L1MC5 LINE L1 -181 7780 6704 2008 152 0 0 chr5 164930175 164930472 -38155060 - AluSx SINE Alu -15 297 1 1727 199 3 3 chr5 164930693 164930989 -38154543 - AluJo SINE Alu -16 296 1 272 119 0 0 chr5 164931110 164931152 -38154380 + AluY SINE Alu 1 42 -258 1499 93 18 18 chr5 164931252 164931478 -38154054 + AluSg/x SINE Alu 85 310 0 987 84 0 35 chr5 164931548 164931691 -38153841 - L1PA11 LINE L1 -3 6171 6034 2151 43 35 4 chr5 164931954 164932212 -38153320 + AluY SINE Alu 34 299 -12 2395 77 0 40 chr5 164932523 164932846 -38152686 - AluSg SINE Alu 0 310 1 2102 89 0 34 chr5 164934744 164935059 -38150473 - AluSg SINE Alu 0 305 1 684 190 0 0 chr5 164935936 164936052 -38149480 + FLAM_C SINE Alu 1 116 -17 1112 184 108 72 chr5 164936253 164936585 -38148947 - MER2 DNA MER2_type 0 344 1 222 309 73 0 chr5 164937138 164937206 -38148326 - L2 LINE L2 -40 3232 3160 2212 138 0 0 chr5 164937608 164937919 -38147613 - AluSx SINE Alu -1 311 1 362 106 43 0 chr5 164938042 164938125 -38147407 + (TA)n Simple_repeat Simple_repeat 2 91 -8 2165 106 0 14 chr5 164938125 164938417 -38147115 - AluSx SINE Alu -24 288 1 362 106 43 0 chr5 164938417 164938427 -38147105 + (TA)n Simple_repeat Simple_repeat 91 99 0 548 208 0 10 chr5 164938444 164938545 -38146987 - MIR SINE MIR -107 155 56 31 0 0 0 chr5 164938644 164938675 -38146857 + AT_rich Low_complexity Low_complexity 1 31 0 322 297 0 59 chr5 164938799 164938900 -38146632 + L2 LINE L2 3160 3254 -18 580 250 119 4 chr5 164939461 164939569 -38145963 - L1MC4 LINE L1 -592 7450 7356 2504 76 0 6 chr5 164939569 164939883 -38145649 - AluSp SINE Alu -1 312 1 580 250 119 4 chr5 164939883 164940010 -38145522 - L1MC4 LINE L1 -686 7356 7188 1816 158 38 14 chr5 164940533 164940825 -38144707 - AluSq SINE Alu -14 299 1 889 87 94 0 chr5 164940998 164941125 -38144407 + AluSp SINE Alu 1 139 -174 2182 95 41 0 chr5 164941246 164941540 -38143992 + AluSp SINE Alu 1 306 -7 2916 9 0 0 chr5 164941704 164942021 -38143511 + AluYb8 SINE Alu 1 317 -1 2074 127 3 3 chr5 164942031 164942331 -38143201 + AluSx SINE Alu 1 300 -12 705 186 0 0 chr5 164942419 164942537 -38142995 - FLAM_C SINE Alu -25 118 1 957 216 42 65 chr5 164943148 164943458 -38142074 - MLT1A2 LTR MaLR -71 303 1 712 187 25 111 chr5 164943917 164944115 -38141417 + MER5A DNA MER1_type 8 188 -1 332 279 82 54 chr5 164944121 164944268 -38141264 + MER5A DNA MER1_type 36 186 -3 477 230 62 9 chr5 164944389 164944502 -38141030 + L2 LINE L2 3194 3312 -1 552 322 37 40 chr5 164944566 164944889 -38140643 - L3 LINE CR1 -354 1223 902 2019 124 23 10 chr5 164944890 164945197 -38140335 - AluSx SINE Alu -1 311 1 2157 119 3 6 chr5 164945836 164946147 -38139385 + AluSx SINE Alu 1 310 -2 2008 85 55 0 chr5 164946180 164946482 -38139050 - AluSp SINE Alu 0 317 1 195 162 0 0 chr5 164946668 164946705 -38138827 + A-rich Low_complexity Low_complexity 1 37 0 317 310 29 53 chr5 164946720 164947001 -38138531 + L1MC4a LINE L1 4741 5014 -1132 * 941 274 168 52 chr5 164946999 164948186 -38137346 + L1MC4a LINE L1 5533 6856 -952 566 241 107 27 chr5 164948170 164948432 -38137100 + L1MC5 LINE L1 7290 7572 -389 * 1663 180 26 16 chr5 164948670 164948976 -38136556 + AluJb SINE Alu 4 312 0 1158 181 95 9 chr5 164949142 164949472 -38136060 - MER90 LTR ERV1 -122 453 99 2414 91 3 0 chr5 164950248 164950555 -38134977 - AluSp SINE Alu -5 308 1 1273 196 75 11 chr5 164950592 164950880 -38134652 - AluJo SINE Alu 0 305 1 21 0 0 0 chr5 164951018 164951039 -38134493 + AT_rich Low_complexity Low_complexity 1 21 0 185 311 0 0 chr5 164951614 164951659 -38133873 - L2 LINE L2 -5 3267 3223 751 150 100 0 chr5 164951765 164951885 -38133647 - FLAM_C SINE Alu 0 133 2 2389 84 3 0 chr5 164953132 164953429 -38132103 + AluSp SINE Alu 1 298 -15 2248 106 0 13 chr5 164954449 164954751 -38130781 + AluSq SINE Alu 1 298 -15 1389 98 0 0 chr5 164956007 164956181 -38129351 - AluSq SINE Alu -22 291 118 2020 115 6 37 chr5 164956261 164956582 -38128950 - AluSx SINE Alu -1 311 1 23 0 0 0 chr5 164956819 164956842 -38128690 + AT_rich Low_complexity Low_complexity 1 23 0 361 146 0 0 chr5 164956850 164956905 -38128627 - MER58 DNA MER1_type 0 2420 2366 186 224 0 0 chr5 164956968 164957017 -38128515 + CT-rich Low_complexity Low_complexity 2 50 0 585 159 9 18 chr5 164957039 164957152 -38128380 - MER58 DNA MER1_type -103 112 1 38 61 0 0 chr5 164957169 164957235 -38128297 + AT_rich Low_complexity Low_complexity 1 66 0 2003 118 23 13 chr5 164957276 164957580 -38127952 - AluSx SINE Alu -5 307 1 402 183 0 0 chr5 164958020 164958080 -38127452 - AluJ/FLAM SINE Alu -252 60 1 233 222 14 0 chr5 164958094 164958166 -38127366 - HAL1 LINE L1 -169 2338 2266 * 326 277 21 53 chr5 164958157 164958345 -38127187 - HAL1 LINE L1 -2323 184 3 877 138 0 0 chr5 164958786 164958909 -38126623 + FLAM_C SINE Alu 1 123 -20 255 276 64 20 chr5 164959294 164959500 -38126032 - L1MC/D LINE L1 -360 5802 5695 2249 79 3 35 chr5 164959531 164959846 -38125686 - AluSx SINE Alu -7 305 1 396 300 9 0 chr5 164959847 164959957 -38125575 - MER20B DNA MER1_type -609 174 64 430 294 42 7 chr5 164959994 164960198 -38125334 - L1MC/D LINE L1 -465 5656 5449 184 194 71 122 chr5 164960209 164960307 -38125225 + MIR3 SINE MIR 115 207 -1 347 278 57 26 chr5 164960517 164960740 -38124792 - L1MC4a LINE L1 -1850 5958 5726 2250 82 7 0 chr5 164960740 164961034 -38124498 - AluY SINE Alu -15 296 1 2286 101 7 0 chr5 164961181 164961489 -38124043 + AluY SINE Alu 1 310 -1 21 0 0 0 chr5 164961490 164961511 -38124021 + AT_rich Low_complexity Low_complexity 1 21 0 2098 136 0 0 chr5 164961539 164961840 -38123692 + AluSx SINE Alu 1 301 -11 1992 128 14 14 chr5 164962071 164962368 -38123164 - AluSx SINE Alu -15 297 1 274 261 36 79 chr5 164962438 164962603 -38122929 - L1ME3A LINE L1 -48 6122 5965 2516 211 39 50 chr5 164962630 164962864 -38122668 - MER82 DNA MER2_type 0 653 418 1903 104 60 11 chr5 164962864 164963156 -38122376 - AluSg SINE Alu 0 305 1 2516 211 39 50 chr5 164963156 164963462 -38122070 - MER82 DNA MER2_type -235 418 118 1478 98 74 5 chr5 164963462 164963677 -38121855 + MER30 DNA MER1_type 1 230 0 2516 211 39 50 chr5 164963677 164963794 -38121738 - MER82 DNA MER2_type -535 118 1 969 217 93 22 chr5 164963828 164964005 -38121527 - L1ME3A LINE L1 -215 5955 5792 2217 118 0 6 chr5 164964005 164964319 -38121213 - AluSx SINE Alu 0 312 1 969 217 93 22 chr5 164964319 164964435 -38121097 - L1ME3A LINE L1 -378 5792 5636 2003 161 24 0 chr5 164964435 164964771 -38120761 - MER2 DNA MER2_type 0 344 1 969 217 93 22 chr5 164964771 164964789 -38120743 - L1ME3A LINE L1 -534 5636 5621 1759 169 14 7 chr5 164965271 164965567 -38119965 + AluJo SINE Alu 1 298 -14 268 208 0 19 chr5 164966418 164966471 -38119061 + MER94 DNA DNA 83 134 0 23 54 0 0 chr5 164966798 164966835 -38118697 + AT_rich Low_complexity Low_complexity 1 37 0 28 29 0 0 chr5 164967621 164967656 -38117876 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 164968127 164968148 -38117384 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr5 164968519 164968560 -38116972 + AT_rich Low_complexity Low_complexity 1 41 0 415 125 0 0 chr5 164972814 164972894 -38112638 - AluS SINE Alu 0 312 233 1018 129 0 0 chr5 164972895 164973034 -38112498 - AluSq/x SINE Alu -173 139 1 405 190 253 0 chr5 164973635 164973793 -38111739 + MER112 DNA MER1_type 15 212 -48 204 240 0 0 chr5 164973907 164973957 -38111575 + T-rich Low_complexity Low_complexity 1 50 0 2291 87 7 0 chr5 164974167 164974466 -38111066 - AluSg SINE Alu -9 301 1 502 296 62 6 chr5 164975109 164975288 -38110244 - MIR SINE MIR -72 190 2 2023 116 0 0 chr5 164977167 164977501 -38108031 + AluSx SINE Alu 34 367 0 25 0 0 0 chr5 164977823 164977848 -38107684 + AT_rich Low_complexity Low_complexity 1 25 0 1937 142 14 0 chr5 164977933 164978228 -38107304 - AluSx SINE Alu -13 299 1 357 279 123 36 chr5 164978385 164978604 -38106928 - MIR SINE MIR -24 238 1 781 206 11 54 chr5 164978653 164978837 -38106695 - AluJb SINE Alu 0 312 137 247 247 21 93 chr5 164978840 164978937 -38106595 + MIR SINE MIR 103 192 -70 2374 72 3 13 chr5 164979333 164979639 -38105893 + AluY SINE Alu 1 303 -8 1967 127 39 0 chr5 164979857 164980140 -38105392 + AluSx SINE Alu 1 294 -18 4781 124 13 37 chr5 164980719 164981612 -38103920 - L1PB3 LINE L1 -7 6147 5272 753 149 0 8 chr5 164981618 164981739 -38103793 - AluSq/x SINE Alu -192 120 1 2255 109 0 7 chr5 164981751 164982055 -38103477 - AluSx SINE Alu -10 302 1 434 224 0 17 chr5 164982055 164982171 -38103361 - L1P LINE L1 -815 5331 5218 582 151 0 0 chr5 164984708 164984794 -38100738 - AluS SINE Alu -224 88 3 31 0 0 0 chr5 164984796 164984827 -38100705 + AT_rich Low_complexity Low_complexity 1 31 0 647 282 41 18 chr5 164985380 164985550 -38099982 - MIR SINE MIR -87 175 2 23 33 0 0 chr5 164986579 164986609 -38098923 + AT_rich Low_complexity Low_complexity 1 30 0 644 211 57 97 chr5 164987247 164987474 -38098058 - MIR SINE MIR 0 262 45 33 0 0 0 chr5 164987606 164987639 -38097893 + AT_rich Low_complexity Low_complexity 1 33 0 2150 120 0 10 chr5 164988426 164988726 -38096806 - AluSx SINE Alu -15 297 1 864 264 43 13 chr5 164989717 164989952 -38095580 + MIR SINE MIR 6 247 -15 390 270 75 0 chr5 164990197 164990354 -38095178 + L1ME3A LINE L1 5769 5939 -231 283 222 16 32 chr5 164991376 164991439 -38094093 - MIR SINE MIR -196 66 5 2079 123 0 0 chr5 164991571 164991905 -38093627 - AluSg SINE Alu 0 310 1 2126 138 0 6 chr5 164992962 164993273 -38092259 - AluSg SINE Alu -1 309 1 308 240 224 36 chr5 164994149 164994345 -38091187 - L1ME4a LINE L1 -28 6093 5861 26 50 0 0 chr5 164994408 164994448 -38091084 + AT_rich Low_complexity Low_complexity 1 40 0 2176 132 3 0 chr5 164994500 164994810 -38090722 - AluSq SINE Alu -2 311 1 472 68 27 0 chr5 164995627 164995700 -38089832 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 661 279 7 32 chr5 164995701 164995930 -38089602 + L1ME4a LINE L1 5599 5819 -302 2335 107 0 7 chr5 164995930 164996240 -38089292 + AluSx SINE Alu 1 308 -4 661 279 7 32 chr5 164996240 164996318 -38089214 + L1ME4a LINE L1 5819 5898 -223 273 222 37 0 chr5 164996519 164996573 -38088959 + L2 LINE L2 3001 3056 -257 2272 96 3 13 chr5 164996808 164997110 -38088422 - AluSq SINE Alu -14 299 1 647 259 0 12 chr5 164997391 164997553 -38087979 - MIR SINE MIR -81 181 22 2167 126 0 3 chr5 164997553 164997855 -38087677 - AluSx SINE Alu -11 301 1 1382 120 164 8 chr5 164998638 164998888 -38086644 + AluSg SINE Alu 1 289 -11 243 0 0 0 chr5 164999079 164999106 -38086426 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 2251 116 0 3 chr5 164999111 164999422 -38086110 + AluSq SINE Alu 1 310 -3 2097 119 0 0 chr5 164999975 165000270 -38085262 - AluSx SINE Alu -17 295 1 752 41 0 0 chr5 165000299 165000396 -38085136 + L1PA4 LINE L1 6059 6155 0 1994 89 0 53 chr5 165000416 165000697 -38084835 - AluSg SINE Alu -44 266 1 669 190 0 15 chr5 165000721 165000858 -38084674 - L1PB4 LINE L1 -3 6153 6019 21 0 0 0 chr5 165001749 165001770 -38083762 + AT_rich Low_complexity Low_complexity 1 21 0 417 230 0 0 chr5 165002110 165002197 -38083335 + MIR SINE MIR 144 230 -32 10193 109 29 101 chr5 165002355 165002964 -38082568 + Tigger1 DNA MER2_type 588 1239 -1179 559 242 17 0 chr5 165002964 165003084 -38082448 + FLAM_A SINE Alu 1 122 -20 10193 109 29 101 chr5 165003084 165004274 -38081258 + Tigger1 DNA MER2_type 1239 2415 -3 619 239 34 45 chr5 165004325 165004501 -38081031 - MER117 DNA MER1_type -23 174 1 1831 114 48 0 chr5 165005788 165006083 -38079449 + AluSx SINE Alu 1 308 0 22 35 0 0 chr5 165006650 165006679 -38078853 + AT_rich Low_complexity Low_complexity 1 29 0 524 250 50 8 chr5 165006679 165006799 -38078733 + L2 LINE L2 3118 3242 -30 279 270 96 66 chr5 165006827 165007151 -38078381 + L2 LINE L2 2765 3094 -178 202 244 163 23 chr5 165007181 165007267 -38078265 - L2 LINE L2 0 3272 3175 241 316 0 60 chr5 165007341 165007411 -38078121 - L2 LINE L2 -245 3068 3006 2160 114 0 3 chr5 165007411 165007718 -38077814 + AluSq SINE Alu 1 306 -7 241 316 0 60 chr5 165007718 165007764 -38077768 - L2 LINE L2 -307 3006 2959 290 376 35 0 chr5 165007790 165007875 -38077657 + L2 LINE L2 3163 3250 -22 358 270 305 30 chr5 165008221 165008413 -38077119 - MIR SINE MIR -4 258 8 910 176 22 44 chr5 165008413 165008542 -38076990 + MER45A DNA AcHobo 1 126 -1455 2213 82 10 0 chr5 165008542 165008836 -38076696 - AluY SINE Alu -14 297 1 910 176 22 44 chr5 165008836 165008888 -38076644 + MER45A DNA AcHobo 126 178 0 180 111 0 0 chr5 165010139 165010166 -38075366 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 873 221 49 118 chr5 165010189 165010597 -38074935 - L2 LINE L2 -50 3263 2884 752 255 217 17 chr5 165010830 165011120 -38074412 - L2 LINE L2 0 3313 2966 1960 125 3 0 chr5 165011175 165011463 -38074069 - AluSx SINE Alu -3 309 21 571 293 137 17 chr5 165011468 165011869 -38073663 + L2 LINE L2 2693 3144 -169 230 169 0 14 chr5 165014052 165014123 -38071409 + T-rich Low_complexity Low_complexity 3 72 0 531 240 118 57 chr5 165014220 165014449 -38071083 + MIR SINE MIR 1 243 -19 375 308 8 34 chr5 165014459 165014576 -38070956 + MIR SINE MIR 79 192 -70 295 277 53 0 chr5 165014603 165014697 -38070835 + L2 LINE L2 3172 3270 -2 328 283 43 10 chr5 165014821 165014948 -38070584 - MIR3 SINE MIR -27 181 49 439 273 191 77 chr5 165015437 165015851 -38069681 + L2 LINE L2 2853 3313 0 223 270 40 27 chr5 165015846 165015920 -38069612 - MIR3 SINE MIR -15 193 119 * 807 305 16 16 chr5 165016499 165016748 -38068784 + MIR SINE MIR 2 250 -12 196 228 25 63 chr5 165016791 165016870 -38068662 - L2 LINE L2 -1 3312 3237 324 0 0 0 chr5 165017010 165017046 -38068486 + (TAA)n Simple_repeat Simple_repeat 2 37 0 286 259 59 12 chr5 165017148 165017233 -38068299 + MER5A DNA MER1_type 101 189 0 267 295 196 0 chr5 165017343 165017455 -38068077 + L2 LINE L2 3132 3265 -7 351 0 0 0 chr5 165017548 165017587 -38067945 + (TG)n Simple_repeat Simple_repeat 1 39 0 244 274 198 57 chr5 165018446 165018603 -38066929 - MIR3 SINE MIR -7 201 23 250 297 59 10 chr5 165018716 165018817 -38066715 + L2 LINE L2 3149 3254 -18 522 278 89 5 chr5 165018927 165019118 -38066414 - MIR SINE MIR -10 252 46 210 329 88 22 chr5 165019155 165019292 -38066240 - MIR SINE MIR -14 248 103 207 317 0 0 chr5 165019691 165019751 -38065781 + GA-rich Low_complexity Low_complexity 3 62 0 209 260 0 0 chr5 165019823 165019873 -38065659 + L2 LINE L2 3223 3272 0 * 397 272 87 12 chr5 165019872 165020041 -38065491 + MIR SINE MIR 75 261 -1 387 0 0 0 chr5 165020477 165020520 -38065012 + (TG)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr5 165020754 165020775 -38064757 + GC_rich Low_complexity Low_complexity 1 21 0 369 330 39 69 chr5 165023928 165024131 -38061401 + MIR SINE MIR 30 226 -36 279 189 75 0 chr5 165024330 165024383 -38061149 + L2 LINE L2 3237 3293 -20 301 190 35 0 chr5 165025441 165025499 -38060033 + MIR SINE MIR 82 141 -67 348 286 11 0 chr5 165025868 165025959 -38059573 + L2 LINE L2 3181 3272 0 532 240 167 25 chr5 165026318 165026522 -38059010 + MIR SINE MIR 20 252 -10 258 32 0 0 chr5 165027055 165027086 -38058446 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 327 269 13 0 chr5 165027240 165027318 -38058214 + L2 LINE L2 3192 3270 -2 693 213 37 61 chr5 165027324 165027563 -38057969 - MIR SINE MIR -1 261 24 423 0 0 0 chr5 165028389 165028436 -38057096 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 279 51 25 chr5 165029152 165029231 -38056301 + MIR3 SINE MIR 85 165 -43 318 283 57 28 chr5 165029331 165029437 -38056095 - HAL1 LINE L1 -123 2384 2276 322 308 161 19 chr5 165029437 165029648 -38055884 - HAL1 LINE L1 -3 2504 2264 22 35 0 0 chr5 165029711 165029740 -38055792 + AT_rich Low_complexity Low_complexity 1 29 0 2062 96 41 3 chr5 165029768 165030060 -38055472 - AluSq SINE Alu -10 303 1 2206 97 0 6 chr5 165030436 165030747 -38054785 + AluSg SINE Alu 1 309 -1 436 310 88 41 chr5 165031044 165031215 -38054317 + MIR3 SINE MIR 7 163 -45 443 333 34 39 chr5 165031568 165031772 -38053760 + MIR3 SINE MIR 3 205 -3 2221 108 0 9 chr5 165032225 165032540 -38052992 + AluSx SINE Alu 1 312 0 209 174 43 22 chr5 165032943 165032989 -38052543 - MIR3 SINE MIR -5 203 157 195 290 0 43 chr5 165033017 165033086 -38052446 + MER5B DNA MER1_type 107 172 -6 1685 192 20 17 chr5 165033265 165033609 -38051923 - MLT1A1 LTR MaLR -11 354 10 479 184 0 0 chr5 165033968 165034055 -38051477 - AluJ/FRAM SINE Alu -9 303 217 1157 93 0 0 chr5 165034137 165034288 -38051244 + AluSq SINE Alu 17 167 -146 501 155 82 10 chr5 165034288 165034385 -38051147 - FRAM SINE Alu -64 112 9 354 233 105 45 chr5 165034466 165034599 -38050933 - MIR SINE MIR -92 170 30 411 270 100 48 chr5 165034636 165034866 -38050666 + L3 LINE CR1 1247 1488 -89 21 0 0 0 chr5 165035010 165035031 -38050501 + AT_rich Low_complexity Low_complexity 1 21 0 1493 160 89 24 chr5 165035142 165035435 -38050097 + AluJb SINE Alu 1 312 0 1270 169 4 29 chr5 165035596 165035839 -38049693 + AluJb SINE Alu 46 282 -30 2159 118 0 6 chr5 165035977 165036291 -38049241 + AluSx SINE Alu 1 312 0 1883 125 14 0 chr5 165036621 165036900 -38048632 + AluSx SINE Alu 17 299 -13 3904 125 32 38 chr5 165036934 165037482 -38048050 - L1MA8 LINE L1 -2 6289 5744 1715 140 14 21 chr5 165037482 165037768 -38047764 - AluJb SINE Alu -28 284 1 3904 125 32 38 chr5 165037768 165037929 -38047603 - L1MA8 LINE L1 -547 5744 5584 271 336 42 17 chr5 165038048 165038167 -38047365 - L2 LINE L2 -5 3308 3187 189 0 0 0 chr5 165038435 165038456 -38047076 + (T)n Simple_repeat Simple_repeat 1 21 0 1784 253 63 38 chr5 165038891 165039427 -38046105 - HAL1 LINE L1 -10 2497 1941 2191 97 3 7 chr5 165039427 165039737 -38045795 - AluSg1 SINE Alu 0 309 1 1784 253 63 38 chr5 165039737 165039855 -38045677 - HAL1 LINE L1 -566 1941 1827 2600 254 93 64 chr5 165039900 165040137 -38045395 - HAL1 LINE L1 -1123 1384 1155 1918 168 76 12 chr5 165040137 165040543 -38044989 - MSTB1 LTR MaLR 0 432 1 2600 254 93 64 chr5 165040543 165040661 -38044871 - HAL1 LINE L1 -1352 1155 1042 1579 178 3 28 chr5 165040661 165040981 -38044551 - AluJo SINE Alu 0 312 1 2600 254 93 64 chr5 165040981 165041200 -38044332 - HAL1 LINE L1 -1465 1042 831 1763 167 10 10 chr5 165041200 165041511 -38044021 - AluSx SINE Alu -1 311 1 2600 254 93 64 chr5 165041511 165042279 -38043253 - HAL1 LINE L1 -1676 831 1 549 342 53 15 chr5 165042741 165043007 -38042525 - Charlie8 DNA MER1_type -2141 276 1 303 49 0 0 chr5 165043186 165043227 -38042305 + (TG)n Simple_repeat Simple_repeat 1 41 0 324 70 0 0 chr5 165043229 165043272 -38042260 + (GA)n Simple_repeat Simple_repeat 2 44 0 2123 115 3 7 chr5 165043451 165043756 -38041776 + AluSq SINE Alu 1 304 -9 988 149 0 0 chr5 165043772 165043920 -38041612 + MER3 DNA MER1_type 2 149 -60 1101 207 9 36 chr5 165044519 165044741 -38040791 - MER58A DNA MER1_type -8 216 1 405 0 0 0 chr5 165044969 165045014 -38040518 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 1607 139 37 0 chr5 165045618 165045863 -38039669 + AluSx SINE Alu 1 254 -58 301 322 23 18 chr5 165045900 165046071 -38039461 - L2 LINE L2 -152 3161 2990 597 252 14 0 chr5 165046131 165046274 -38039258 - MIR SINE MIR -94 168 24 180 0 0 0 chr5 165046278 165046298 -38039234 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 21 0 0 0 chr5 165046596 165046617 -38038915 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr5 165046643 165046671 -38038861 + AT_rich Low_complexity Low_complexity 1 28 0 436 288 22 22 chr5 165047427 165047566 -38037966 + MIR SINE MIR 70 208 -54 271 323 123 15 chr5 165047659 165047854 -38037678 + L2 LINE L2 2524 2739 -575 212 250 0 0 chr5 165048027 165048075 -38037457 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1247 251 60 33 chr5 165048077 165048531 -38037001 - L1MC4a LINE L1 -1849 5959 5494 190 288 18 63 chr5 165048691 165048802 -38036730 + L2 LINE L2 2994 3099 -173 239 313 50 38 chr5 165048932 165049012 -38036520 - L2 LINE L2 -37 3235 3155 920 115 0 0 chr5 165049179 165049309 -38036223 - AluSq SINE Alu -11 302 173 1320 99 0 0 chr5 165049495 165049666 -38035866 - AluSq SINE Alu -136 177 7 294 148 0 0 chr5 165049696 165049750 -38035782 + (TTCC)n Simple_repeat Simple_repeat 1 54 0 1951 122 3 0 chr5 165050243 165050530 -38035002 - AluSp SINE Alu -25 288 1 23 0 0 0 chr5 165051090 165051113 -38034419 + AT_rich Low_complexity Low_complexity 1 23 0 226 214 0 0 chr5 165051469 165051511 -38034021 + GA-rich Low_complexity Low_complexity 1 42 0 2091 96 3 0 chr5 165051967 165052275 -38033257 + AluSp SINE Alu 1 309 0 801 252 103 8 chr5 165052489 165052723 -38032809 + MIR SINE MIR 1 256 -6 196 277 85 64 chr5 165053086 165053227 -38032305 + MIR SINE MIR 56 199 -63 315 260 110 0 chr5 165053775 165053875 -38031657 + MIR SINE MIR 149 259 -3 1219 101 22 22 chr5 165054410 165054588 -38030944 + AluSc SINE Alu 127 304 -5 260 275 12 62 chr5 165054867 165054947 -38030585 + MER5B DNA MER1_type 61 136 -42 2421 63 3 3 chr5 165055074 165055374 -38030158 - AluY SINE Alu -11 300 1 417 277 0 18 chr5 165055674 165055786 -38029746 + MIR SINE MIR 81 190 -72 245 331 101 7 chr5 165056318 165056457 -38029075 - L2 LINE L2 -2 3270 3119 1268 139 25 10 chr5 165056457 165056658 -38028874 - AluJb SINE Alu -16 296 93 2058 145 0 0 chr5 165056710 165057006 -38028526 + AluSx SINE Alu 1 296 -16 267 214 31 71 chr5 165057111 165057209 -38028323 + L1ME4a LINE L1 5956 6049 -72 284 0 28 0 chr5 165057213 165057249 -38028283 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 1769 133 3 79 chr5 165057259 165057589 -38027943 - AluJb SINE Alu -4 308 4 654 278 50 46 chr5 165057731 165058012 -38027520 - LTR16C LTR ERVL 0 491 210 369 318 114 45 chr5 165058202 165058510 -38027022 + L3 LINE CR1 613 941 -636 239 252 59 74 chr5 165058735 165058870 -38026662 + L3 LINE CR1 1110 1242 -335 2001 145 3 6 chr5 165058912 165059223 -38026309 + AluJo SINE Alu 3 312 0 330 279 29 36 chr5 165059351 165059491 -38026041 + MIR SINE MIR 117 255 -7 465 276 74 30 chr5 165059507 165059710 -38025822 + L3 LINE CR1 1278 1489 -88 325 223 60 65 chr5 165060358 165060465 -38025067 + MIR SINE MIR 32 147 -67 1597 166 20 47 chr5 165060493 165060789 -38024743 - AluJo SINE Alu -24 288 1 219 266 78 0 chr5 165060809 165060873 -38024659 - L2 LINE L2 -54 3218 3150 2217 100 21 0 chr5 165061014 165061303 -38024229 - AluSx SINE Alu -17 295 1 308 188 94 42 chr5 165061364 165061460 -38024072 + MER113 DNA MER1_type? 1 101 -420 2054 113 3 7 chr5 165062884 165063221 -38022311 + AluSg SINE Alu 1 336 0 2277 121 0 9 chr5 165063251 165063566 -38021966 + AluSx SINE Alu 1 312 0 1436 170 182 80 chr5 165063688 165064112 -38021420 - MLT1C LTR MaLR 0 467 1 423 296 187 30 chr5 165064277 165064544 -38020988 + L1ME4a LINE L1 5562 5873 -297 2110 125 0 3 chr5 165064571 165064867 -38020665 - AluJb SINE Alu -17 295 1 2057 134 0 13 chr5 165064986 165065293 -38020239 - AluSx SINE Alu -9 303 1 2748 160 29 23 chr5 165065480 165065611 -38019921 + L1MB7 LINE L1 5668 5797 -387 2249 96 30 0 chr5 165065611 165065914 -38019618 + AluSq SINE Alu 1 312 -1 2748 160 29 23 chr5 165065914 165066295 -38019237 + L1MB7 LINE L1 5797 6183 -1 2104 113 0 23 chr5 165066357 165066659 -38018873 - AluSg SINE Alu -15 295 1 308 246 33 25 chr5 165066715 165066837 -38018695 + L1ME4a LINE L1 5988 6110 -11 22 35 0 0 chr5 165066890 165066919 -38018613 + AT_rich Low_complexity Low_complexity 1 29 0 3170 128 0 11 chr5 165066921 165067389 -38018143 - L1PB1 LINE L1 -3 6148 5686 373 321 161 13 chr5 165067410 165067634 -38017898 - MIR SINE MIR 0 262 6 180 291 126 39 chr5 165068876 165069003 -38016529 + L3b LINE CR1 1115 1252 -331 823 150 0 30 chr5 165069061 165069194 -38016338 + FLAM_C SINE Alu 1 129 -14 1563 304 125 59 chr5 165069303 165070740 -38014792 + L2 LINE L2 1744 3267 -5 279 351 78 0 chr5 165070742 165070933 -38014599 + L3b LINE CR1 1263 1468 -115 469 259 184 8 chr5 165071134 165071373 -38014159 + L2 LINE L2 1017 1297 -2017 4641 240 104 80 chr5 165071629 165072383 -38013149 + L2 LINE L2 1018 1752 -1561 769 157 9 0 chr5 165072383 165072498 -38013034 - FLAM_C SINE Alu -25 118 3 4641 240 104 80 chr5 165072498 165073813 -38011719 + L2 LINE L2 1752 3256 -57 1372 153 9 5 chr5 165073813 165074029 -38011503 - MER20 DNA MER1_type -1 218 2 4641 240 104 80 chr5 165074029 165074088 -38011444 + L2 LINE L2 3256 3312 -1 647 177 122 61 chr5 165074542 165074723 -38010809 - MIR SINE MIR -14 248 57 21 0 0 0 chr5 165074753 165074774 -38010758 + AT_rich Low_complexity Low_complexity 1 21 0 287 250 109 0 chr5 165077061 165077153 -38008379 + L2 LINE L2 3171 3272 0 234 300 32 42 chr5 165077764 165077946 -38007586 - MIR SINE MIR -50 212 40 1945 142 3 7 chr5 165079118 165079421 -38006111 - AluJb SINE Alu -10 302 1 723 235 78 9 chr5 165079426 165079656 -38005876 - MIR SINE MIR -11 251 6 365 320 41 0 chr5 165079899 165080021 -38005511 + MIR SINE MIR 66 192 -70 469 239 26 52 chr5 165080381 165080536 -38004996 - MIR SINE MIR -30 232 82 473 283 89 33 chr5 165080792 165080972 -38004560 + L2 LINE L2 2513 2702 -612 23 0 0 0 chr5 165080988 165081011 -38004521 + AT_rich Low_complexity Low_complexity 1 23 0 665 227 39 70 chr5 165081680 165081909 -38003623 + LTR1B LTR ERV1 1 222 -604 * 1537 197 101 105 chr5 165081900 165082584 -38002948 + LTR1B LTR ERV1 95 982 -38 552 320 59 30 chr5 165083000 165083453 -38002079 + L2 LINE L2 2713 3217 -96 205 250 0 0 chr5 165083473 165083513 -38002019 + polypurine Low_complexity Low_complexity 2 41 0 930 238 73 75 chr5 165083566 165083977 -38001555 + LTR16A1 LTR ERVL 48 457 0 352 271 0 25 chr5 165084997 165085115 -38000417 + L2 LINE L2 3158 3272 0 469 322 58 12 chr5 165085126 165085200 -38000332 + MIR SINE MIR 16 85 -177 1931 102 0 36 chr5 165085200 165085474 -38000058 - AluSx SINE Alu -12 300 37 469 322 58 12 chr5 165085474 165085570 -37999962 + MIR SINE MIR 85 194 -68 21 57 0 0 chr5 165085977 165086012 -37999520 + AT_rich Low_complexity Low_complexity 1 35 0 900 202 83 10 chr5 165086810 165087003 -37998529 + AluJo SINE Alu 83 289 -23 2190 103 0 0 chr5 165087026 165087308 -37998224 + AluSq SINE Alu 2 283 -30 279 0 0 0 chr5 165087311 165087342 -37998190 + (CATA)n Simple_repeat Simple_repeat 2 32 0 299 274 193 14 chr5 165087434 165087646 -37997886 + MIR SINE MIR 7 256 -6 216 309 0 0 chr5 165087853 165087908 -37997624 + L2 LINE L2 3228 3282 -31 2289 104 0 3 chr5 165088004 165088311 -37997221 - AluSg SINE Alu -4 306 1 545 265 173 44 chr5 165088363 165088635 -37996897 - MLT1K LTR MaLR -82 506 200 2323 183 53 48 chr5 165088746 165089310 -37996222 - MER74B LTR ERVL 0 622 56 234 176 0 0 chr5 165089382 165089433 -37996099 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 343 297 44 0 chr5 165089452 165089543 -37995989 - L2 LINE L2 -6 3266 3172 228 67 0 0 chr5 165089584 165089614 -37995918 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 1824 150 0 0 chr5 165089625 165089892 -37995640 - AluJo SINE Alu -45 267 1 481 297 73 0 chr5 165090110 165090275 -37995257 - MIR SINE MIR -50 212 36 1292 215 106 45 chr5 165090352 165090748 -37994784 - MER113 DNA MER1_type? -95 426 7 494 270 72 78 chr5 165091668 165092013 -37993519 + L1ME4a LINE L1 5613 5956 -165 1286 78 0 6 chr5 165092013 165092179 -37993353 + L1PA13 LINE L1 5994 6158 -5 494 270 72 78 chr5 165092179 165092344 -37993188 + L1ME4a LINE L1 5956 6120 -1 448 286 143 62 chr5 165093134 165093393 -37992139 + L2 LINE L2 2985 3264 -8 217 379 30 0 chr5 165093528 165093594 -37991938 - L3 LINE CR1 -96 1481 1414 323 320 157 0 chr5 165094384 165094531 -37991001 + MIR SINE MIR 91 260 -2 11734 189 126 51 chr5 165094611 165095599 -37989933 - Zaphod DNA AcHobo -81 3950 3037 2098 114 7 0 chr5 165095599 165095889 -37989643 + L1PA14 LINE L1 5870 6161 0 11734 189 126 51 chr5 165095889 165095900 -37989632 - Zaphod DNA AcHobo -994 3037 3028 2457 84 0 0 chr5 165095900 165096209 -37989323 - AluSg SINE Alu -1 309 1 11734 189 126 51 chr5 165096209 165096882 -37988650 - Zaphod DNA AcHobo -1003 3028 2407 2047 113 0 20 chr5 165096882 165097184 -37988348 - AluSx SINE Alu -16 296 1 11734 189 126 51 chr5 165097184 165098294 -37987238 - Zaphod DNA AcHobo -1624 2407 1381 3188 20 6 0 chr5 165098294 165098642 -37986890 + L1PA4 LINE L1 5806 6155 0 11734 189 126 51 chr5 165098642 165099526 -37986006 - Zaphod DNA AcHobo -2650 1381 7 258 32 0 0 chr5 165099671 165099702 -37985830 + (CA)n Simple_repeat Simple_repeat 2 32 0 1440 122 44 0 chr5 165099702 165099907 -37985625 - AluSg/x SINE Alu -14 296 83 343 287 97 50 chr5 165099907 165100065 -37985467 - L1ME4a LINE L1 -162 5959 5783 2196 128 0 0 chr5 165100065 165100363 -37985169 - AluSx SINE Alu -14 298 1 343 287 97 50 chr5 165100363 165100462 -37985070 - L1ME4a LINE L1 -338 5783 5690 28 0 0 0 chr5 165100520 165100548 -37984984 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr5 165100811 165100885 -37984647 + AT_rich Low_complexity Low_complexity 1 74 0 180 0 0 0 chr5 165100970 165100990 -37984542 + (TG)n Simple_repeat Simple_repeat 2 21 0 2457 199 45 53 chr5 165101348 165101907 -37983625 + L1ME1 LINE L1 5523 6078 -88 2385 100 0 0 chr5 165101907 165102207 -37983325 - AluSx SINE Alu -12 300 1 2457 199 45 53 chr5 165102207 165102284 -37983248 + L1ME1 LINE L1 6078 6154 -12 1879 158 10 3 chr5 165103252 165103549 -37981983 + AluJb SINE Alu 1 299 -13 210 196 20 0 chr5 165103550 165103601 -37981931 + (TA)n Simple_repeat Simple_repeat 1 52 0 505 311 50 70 chr5 165103883 165104088 -37981444 + HAL1b LINE L1 53 248 -1100 1845 164 0 35 chr5 165104088 165104405 -37981127 + AluJb SINE Alu 1 306 -6 505 311 50 70 chr5 165104405 165104582 -37980950 + HAL1b LINE L1 248 427 -921 1211 154 154 47 chr5 165105416 165105617 -37979915 + MLT2B1 LTR ERVL 1 250 -270 1840 121 7 65 chr5 165105617 165105923 -37979609 + AluSx SINE Alu 1 288 -24 1211 154 154 47 chr5 165105923 165106040 -37979492 + MLT2B1 LTR ERVL 250 353 -167 1042 116 0 0 chr5 165106040 165106178 -37979354 + AluSg/x SINE Alu 158 295 -17 2802 228 70 77 chr5 165106315 165106475 -37979057 + L1MC4 LINE L1 6348 6508 -1534 1804 174 17 0 chr5 165106475 165106774 -37978758 + AluJo SINE Alu 1 304 -8 2802 228 70 77 chr5 165106774 165108223 -37977309 + L1MC4 LINE L1 6508 8041 -1 606 255 184 4 chr5 165108351 165108606 -37976926 - MLT1L LTR MaLR 0 615 315 848 179 87 43 chr5 165109662 165109869 -37975663 + MER20 DNA MER1_type 4 219 0 345 298 141 55 chr5 165110710 165111129 -37974403 - L2 LINE L2 0 3313 2859 1978 152 0 0 chr5 165111359 165111656 -37973876 + AluSx SINE Alu 1 297 -15 340 319 86 12 chr5 165112842 165113005 -37972527 - MIR SINE MIR -8 254 80 206 143 29 0 chr5 165113171 165113206 -37972326 + (CA)n Simple_repeat Simple_repeat 1 36 0 2048 133 3 10 chr5 165113472 165113774 -37971758 - AluJb SINE Alu -12 300 1 361 202 56 22 chr5 165114230 165114319 -37971213 - MIR SINE MIR -2 260 169 5743 79 10 37 chr5 165114319 165115154 -37970378 - L1PA13 LINE L1 -2 6161 5350 2396 83 3 10 chr5 165115154 165115455 -37970077 + AluSp SINE Alu 1 299 -14 5743 79 10 37 chr5 165115455 165115521 -37970011 - L1PA13 LINE L1 -813 5350 5284 626 217 29 14 chr5 165115521 165115659 -37969873 - MIR SINE MIR -83 179 40 4003 52 2 0 chr5 165115999 165116503 -37969029 - LTR10C LTR ERV1 0 591 87 1413 41 0 0 chr5 165116503 165116674 -37968858 - L1PA4 LINE L1 -1 6154 5984 1297 34 0 6 chr5 165116674 165116850 -37968682 + L1P LINE L1 5156 5330 -816 680 53 0 11 chr5 165116850 165116944 -37968588 - LTR10C LTR ERV1 -498 93 1 228 67 0 0 chr5 165117050 165117080 -37968452 + U2 snRNA snRNA 4 33 -155 245 111 0 0 chr5 165117454 165117490 -37968042 - MADE1 DNA Mariner -3 77 42 683 346 70 15 chr5 165117540 165117867 -37967665 + L2 LINE L2 2430 2774 -540 466 310 78 16 chr5 165118088 165118333 -37967199 + MIR SINE MIR 3 262 0 273 348 169 8 chr5 165118335 165118453 -37967079 + L2 LINE L2 3136 3272 0 504 238 62 44 chr5 165118698 165118858 -37966674 + MIR3 SINE MIR 45 207 -1 23 0 0 0 chr5 165119817 165119840 -37965692 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 165120271 165120295 -37965237 + AT_rich Low_complexity Low_complexity 1 24 0 379 199 66 81 chr5 165120589 165120685 -37964847 - L1MD3 LINE L1 -5 7990 7895 2080 125 17 3 chr5 165120685 165120980 -37964552 - AluSp SINE Alu -8 305 7 379 199 66 81 chr5 165120980 165121019 -37964513 - L1MD3 LINE L1 -100 7895 7857 635 42 58 0 chr5 165121029 165121149 -37964383 + (TA)n Simple_repeat Simple_repeat 2 128 0 826 144 0 0 chr5 165121154 165121272 -37964260 - FLAM_C SINE Alu -25 118 1 1545 197 57 9 chr5 165121274 165121624 -37963908 - L1MD3 LINE L1 -158 7837 7471 558 134 0 0 chr5 165121642 165121724 -37963808 - AluSp SINE Alu -189 124 43 340 291 14 43 chr5 165121731 165121941 -37963591 + L1MC5 LINE L1 7009 7212 -749 536 216 24 0 chr5 165121981 165122106 -37963426 - MER94 DNA DNA -5 129 2 262 304 54 0 chr5 165122252 165122364 -37963168 + L1MC5 LINE L1 7259 7376 -585 254 256 108 39 chr5 165122426 165122555 -37962977 + L1MC4 LINE L1 7596 7733 -309 814 165 0 0 chr5 165122697 165122889 -37962643 + FLAM_C SINE Alu 1 192 0 213 276 0 17 chr5 165123109 165123167 -37962365 - MER5A DNA MER1_type -65 124 68 566 78 29 10 chr5 165123259 165123362 -37962170 + (TC)n Simple_repeat Simple_repeat 1 105 0 291 335 145 18 chr5 165124041 165124268 -37961264 - MIR SINE MIR -5 257 2 1042 251 20 4 chr5 165126160 165126415 -37959117 + MIR SINE MIR 2 260 -2 1507 198 31 6 chr5 165126659 165126982 -37958550 - MLT1A1 LTR MaLR -2 363 33 354 319 79 29 chr5 165127092 165127231 -37958301 - MIR SINE MIR -60 148 2 516 300 74 43 chr5 165127481 165127711 -37957821 + MIR SINE MIR 26 262 0 223 268 16 16 chr5 165128170 165128293 -37957239 + (TA)n Simple_repeat Simple_repeat 1 123 0 2183 107 17 7 chr5 165128357 165128656 -37956876 - AluSx SINE Alu -10 302 1 1649 179 7 13 chr5 165128865 165129167 -37956365 - AluJo SINE Alu -12 300 1 1244 192 91 84 chr5 165129306 165129365 -37956167 - L1MB7 LINE L1 -1 6165 6108 1809 153 11 4 chr5 165129365 165129671 -37955861 + AluSx SINE Alu 1 308 0 1244 192 91 84 chr5 165129671 165129963 -37955569 - L1MB7 LINE L1 -58 6108 5780 2289 52 21 0 chr5 165129963 165130252 -37955280 - AluY SINE Alu -16 295 1 1244 192 91 84 chr5 165130252 165130365 -37955167 - L1MB7 LINE L1 -386 5780 5669 713 299 42 4 chr5 165130382 165130623 -37954909 + MIR SINE MIR 11 260 -2 25 0 0 0 chr5 165130917 165130942 -37954590 + AT_rich Low_complexity Low_complexity 1 25 0 404 233 50 166 chr5 165132117 165132426 -37953106 - MIR SINE MIR 0 262 2 235 300 62 39 chr5 165133387 165133517 -37952015 - L2 LINE L2 -1 3312 3180 344 286 67 9 chr5 165133545 165133650 -37951882 - MIR SINE MIR -72 136 26 181 273 0 18 chr5 165133976 165134031 -37951501 + MIR SINE MIR 101 154 -108 * 423 244 160 13 chr5 165134030 165134186 -37951346 + MIR SINE MIR 58 236 -26 377 328 52 8 chr5 165134383 165134517 -37951015 - L2 LINE L2 -279 3034 2895 267 234 117 13 chr5 165134660 165134737 -37950795 - MIR SINE MIR 0 262 178 260 289 104 30 chr5 165134981 165135116 -37950416 - MIR SINE MIR -24 238 94 2034 136 0 16 chr5 165135440 165135748 -37949784 - AluSx SINE Alu -9 303 1 397 105 0 0 chr5 165135841 165135898 -37949634 + (G)n Simple_repeat Simple_repeat 1 57 0 538 260 135 16 chr5 165136395 165136707 -37948825 - L1MC4 LINE L1 -6 8036 7688 924 142 0 0 chr5 165136759 165136893 -37948639 + FLAM_C SINE Alu 1 134 -9 706 224 85 92 chr5 165136897 165137019 -37948513 - L1MC4 LINE L1 -404 7638 7517 1925 109 42 58 chr5 165137019 165137332 -37948200 + AluSc SINE Alu 1 308 -1 706 224 85 92 chr5 165137332 165137643 -37947889 - L1MC4 LINE L1 -525 7517 7208 1989 133 0 3 chr5 165137672 165138002 -37947530 - AluSx SINE Alu 0 329 1 287 307 0 0 chr5 165140037 165140125 -37945407 - L1ME4a LINE L1 -67 6054 5967 21 0 0 0 chr5 165140441 165140462 -37945070 + AT_rich Low_complexity Low_complexity 1 21 0 1031 152 157 0 chr5 165140663 165140880 -37944652 - MER68 LTR ERV1 -311 251 1 2187 126 0 7 chr5 165140945 165141255 -37944277 - AluSx SINE Alu -4 308 1 2177 98 0 7 chr5 165141260 165141582 -37943950 - AluSx SINE Alu 0 320 1 2087 120 0 20 chr5 165141583 165141883 -37943649 - AluSx SINE Alu -18 294 1 522 267 0 0 chr5 165142085 165142294 -37943238 + (CCCCAG)n Simple_repeat Simple_repeat 1 209 0 187 317 12 37 chr5 165142896 165142978 -37942554 - L2 LINE L2 -262 3010 2931 222 118 0 0 chr5 165143428 165143462 -37942070 + (T)n Simple_repeat Simple_repeat 1 34 0 26 0 0 0 chr5 165144818 165144844 -37940688 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr5 165145725 165145755 -37939777 + AT_rich Low_complexity Low_complexity 1 30 0 623 275 180 9 chr5 165147235 165147457 -37938075 - MIR SINE MIR -1 261 2 321 333 106 28 chr5 165147745 165147886 -37937646 - MIR3 SINE MIR -51 157 6 388 318 73 10 chr5 165148371 165148563 -37936969 + L3 LINE CR1 1191 1394 -183 2299 66 42 0 chr5 165148854 165149143 -37936389 + AluSp SINE Alu 1 301 -12 23 33 0 0 chr5 165152017 165152047 -37933485 + AT_rich Low_complexity Low_complexity 1 30 0 694 207 0 9 chr5 165153291 165153407 -37932125 - FLAM_A SINE Alu -18 115 1 2502 57 0 3 chr5 165154522 165154818 -37930714 - AluSc SINE Alu -14 295 1 13645 125 36 37 chr5 165155156 165155623 -37929909 + Tigger1 DNA MER2_type 3 469 -1949 243 0 0 0 chr5 165155623 165155650 -37929882 + (TG)n Simple_repeat Simple_repeat 2 28 0 2215 106 0 0 chr5 165155650 165155934 -37929598 - AluY SINE Alu -27 284 1 13645 125 36 37 chr5 165155934 165157899 -37927633 + Tigger1 DNA MER2_type 467 2418 0 206 238 0 0 chr5 165157904 165157946 -37927586 + T-rich Low_complexity Low_complexity 2 43 0 763 253 94 0 chr5 165157990 165158255 -37927277 - L1MC5 LINE L1 -400 7561 7272 1033 198 39 5 chr5 165158277 165158484 -37927048 + MER20 DNA MER1_type 6 219 0 1004 196 166 76 chr5 165158490 165158524 -37927008 - L1MC5 LINE L1 -742 7219 7189 831 57 122 0 chr5 165158524 165158647 -37926885 + MER85 DNA T2_type 1 138 -1 1004 196 166 76 chr5 165158647 165159075 -37926457 - L1MC5 LINE L1 -772 7189 6715 487 226 79 33 chr5 165159672 165159705 -37925827 - L1MDb LINE L1 -5076 1454 1424 1350 146 98 49 chr5 165159705 165159992 -37925540 - AluJo SINE Alu -11 301 1 487 226 79 33 chr5 165159992 165160279 -37925253 - L1MDb LINE L1 -5106 1424 1121 2040 132 7 23 chr5 165161001 165161311 -37924221 - AluJb SINE Alu -7 305 1 21 0 0 0 chr5 165163306 165163327 -37922205 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 165164276 165164297 -37921235 + AT_rich Low_complexity Low_complexity 1 21 0 308 309 82 0 chr5 165164323 165164433 -37921099 - L1ME LINE L1 -298 5823 5705 24 32 0 0 chr5 165164669 165164700 -37920832 + AT_rich Low_complexity Low_complexity 1 31 0 1029 274 177 38 chr5 165167871 165168649 -37916883 + L2 LINE L2 2381 3269 -44 2007 131 0 3 chr5 165168878 165169199 -37916333 - AluSx SINE Alu 0 320 1 6369 148 45 28 chr5 165169767 165170001 -37915531 + L1MA5A LINE L1 4052 4281 -2016 1922 125 7 50 chr5 165170001 165170304 -37915228 + AluSx SINE Alu 5 294 -18 6369 148 45 28 chr5 165170304 165170674 -37914858 + L1MA5A LINE L1 4281 4643 -1654 1584 161 57 4 chr5 165170674 165170954 -37914578 + AluJo SINE Alu 6 300 -12 6369 148 45 28 chr5 165170954 165172562 -37912970 + L1MA5A LINE L1 4643 6294 -3 378 120 0 0 chr5 165173423 165173473 -37912059 - Tigger7 DNA MER2_type -2 2485 2436 1282 246 214 22 chr5 165173596 165174357 -37911175 - HAL1 LINE L1 -810 1697 791 835 119 17 0 chr5 165174371 165174489 -37911043 - AluJb SINE Alu -192 120 1 472 170 259 0 chr5 165174549 165174661 -37910871 + MER20 DNA MER1_type 3 143 -76 372 259 254 0 chr5 165174695 165174880 -37910652 - HAL1 LINE L1 -1753 754 523 900 211 100 19 chr5 165174940 165175231 -37910301 - MER58B DNA MER1_type 0 341 7 528 275 81 54 chr5 165175294 165175589 -37909943 - HAL1 LINE L1 -2110 397 95 24 32 0 0 chr5 165176299 165176330 -37909202 + AT_rich Low_complexity Low_complexity 1 31 0 270 320 81 27 chr5 165177349 165177571 -37907961 + L1MC4 LINE L1 7665 7898 -144 892 163 182 20 chr5 165178364 165178567 -37906965 - MER46A DNA MER2_type 0 236 1 1943 82 4 0 chr5 165179077 165179320 -37906212 + AluSg SINE Alu 1 244 -66 582 280 159 5 chr5 165179444 165179847 -37905685 - L1ME LINE L1 -4983 1401 937 908 203 71 11 chr5 165179891 165180073 -37905459 - AluJo SINE Alu -23 289 97 2018 115 20 14 chr5 165180074 165180370 -37905162 - AluSx SINE Alu -8 304 7 1336 206 94 0 chr5 165180374 165180651 -37904881 - AluJb SINE Alu -9 303 1 425 236 98 40 chr5 165180653 165180878 -37904654 - L1ME LINE L1 -5313 1059 822 350 263 45 26 chr5 165181259 165181415 -37904117 - L1ME LINE L1 -6199 364 206 27 0 0 0 chr5 165181494 165181521 -37904011 + AT_rich Low_complexity Low_complexity 1 27 0 25 90 0 0 chr5 165183237 165183304 -37902228 + AT_rich Low_complexity Low_complexity 1 67 0 1521 181 62 7 chr5 165183945 165184233 -37901299 + AluJo SINE Alu 3 306 -6 22 70 0 0 chr5 165184272 165184315 -37901217 + AT_rich Low_complexity Low_complexity 1 43 0 2284 91 7 3 chr5 165185092 165185390 -37900142 - AluSq SINE Alu -4 309 11 29 28 0 0 chr5 165186305 165186341 -37899191 + AT_rich Low_complexity Low_complexity 1 36 0 1441 111 12 66 chr5 165187888 165187969 -37897563 + MER30 DNA MER1_type 1 85 -145 2214 89 7 0 chr5 165187969 165188260 -37897272 + AluSx SINE Alu 1 293 -19 1441 111 12 66 chr5 165188260 165188421 -37897111 + MER30 DNA MER1_type 85 230 0 294 370 31 0 chr5 165188429 165188556 -37896976 + L2 LINE L2 2606 2736 -578 190 330 76 107 chr5 165188647 165188972 -37896560 + L2 LINE L2 2824 3132 -140 2256 99 23 0 chr5 165188972 165189275 -37896257 - AluSx SINE Alu -2 310 1 190 330 76 107 chr5 165189275 165189409 -37896123 + L2 LINE L2 3132 3269 -3 2752 158 54 35 chr5 165189588 165190213 -37895319 - L1MA7 LINE L1 -12 6279 5643 359 253 46 0 chr5 165192023 165192110 -37893422 + MIR SINE MIR 154 244 -18 189 0 0 0 chr5 165193523 165193544 -37891988 + (A)n Simple_repeat Simple_repeat 1 21 0 22 80 0 0 chr5 165195142 165195192 -37890340 + AT_rich Low_complexity Low_complexity 1 50 0 1273 181 58 48 chr5 165195425 165195718 -37889814 - AluJo SINE Alu -16 296 1 598 150 20 0 chr5 165199786 165199886 -37885646 - MER5A DNA MER1_type -87 102 1 23 0 0 0 chr5 165200270 165200293 -37885239 + AT_rich Low_complexity Low_complexity 1 23 0 1478 182 0 89 chr5 165200310 165200634 -37884898 + AluJo SINE Alu 2 296 -16 26 30 0 0 chr5 165201547 165201580 -37883952 + AT_rich Low_complexity Low_complexity 1 33 0 2205 116 0 3 chr5 165201584 165201885 -37883647 + AluSx SINE Alu 3 302 -10 250 263 0 26 chr5 165201885 165201961 -37883571 - L1MC4 LINE L1 -14 8028 7955 2209 82 0 17 chr5 165201968 165202260 -37883272 - AluY SINE Alu -24 287 1 259 91 23 23 chr5 165202265 165202309 -37883223 - MLT1A1 LTR MaLR -318 47 4 1299 201 46 19 chr5 165202723 165203047 -37882485 + L1ME1 LINE L1 5721 6053 -113 229 119 0 24 chr5 165203050 165203092 -37882440 + L1MB7 LINE L1 6134 6174 -10 1519 102 165 16 chr5 165203203 165203458 -37882074 - AluSg SINE Alu -6 304 12 438 20 0 0 chr5 165203836 165203887 -37881645 + (TA)n Simple_repeat Simple_repeat 1 51 0 315 0 0 0 chr5 165203886 165203921 -37881611 + (CA)n Simple_repeat Simple_repeat 2 36 0 * 354 308 71 50 chr5 165204113 165204295 -37881237 - MIR SINE MIR -12 250 65 712 164 0 8 chr5 165204295 165204429 -37881103 + Tigger1 DNA MER2_type 341 473 -1945 189 0 0 0 chr5 165204429 165204450 -37881082 + (TG)n Simple_repeat Simple_repeat 2 22 0 633 272 12 24 chr5 165204455 165204701 -37880831 - AluSg1 SINE Alu -26 283 41 185 194 0 0 chr5 165204927 165204958 -37880574 + MIR SINE MIR 61 91 -171 451 262 37 126 chr5 165205108 165205379 -37880153 - L2 LINE L2 -16 3256 3010 2866 13 0 3 chr5 165206232 165206548 -37878984 - AluYb8 SINE Alu -3 315 1 230 308 19 19 chr5 165206637 165206744 -37878788 - MIR3 SINE MIR -15 193 87 520 104 13 0 chr5 165207513 165207590 -37877942 - L1MB8 LINE L1 -6 6172 6095 1707 151 54 91 chr5 165208964 165209316 -37876216 - MER2 DNA MER2_type -1 343 5 349 187 53 0 chr5 165209317 165209392 -37876140 + L1MA9 LINE L1 6231 6309 -3 390 299 193 0 chr5 165209439 165209626 -37875906 - MIR SINE MIR -3 259 37 2237 119 0 0 chr5 165209876 165210179 -37875353 + AluSc SINE Alu 1 303 -6 1813 156 25 0 chr5 165210224 165210507 -37875025 - AluSx SINE Alu -22 290 1 2267 175 38 31 chr5 165211034 165211486 -37874046 - MLT1C LTR MaLR -12 455 1 578 300 93 12 chr5 165211871 165212118 -37873414 - Tigger8 DNA MER2_type -370 296 30 2144 65 49 0 chr5 165212170 165212433 -37873099 + AluY SINE Alu 22 297 -14 534 214 19 0 chr5 165212547 165212650 -37872882 + MER5A DNA MER1_type 8 112 -77 501 294 33 43 chr5 165212709 165212893 -37872639 + MIR SINE MIR 1 182 -80 4153 140 128 7 chr5 165213055 165213792 -37871740 + LTR1B LTR ERV1 1 826 0 2719 151 33 23 chr5 165214061 165214499 -37871033 - Charlie1b DNA MER1_type -2240 521 76 2309 106 0 3 chr5 165214499 165214801 -37870731 + AluSx SINE Alu 1 301 -11 2719 151 33 23 chr5 165214801 165214847 -37870685 - Charlie1b DNA MER1_type -2685 76 32 696 233 8 0 chr5 165215699 165215819 -37869713 + FLAM_A SINE Alu 2 122 -11 281 179 12 0 chr5 165215826 165215910 -37869622 + (TA)n Simple_repeat Simple_repeat 1 85 0 898 169 0 14 chr5 165215910 165216058 -37869474 + FRAM SINE Alu 1 140 -36 1836 136 38 3 chr5 165216139 165216306 -37869226 - AluSg SINE Alu -13 297 114 333 0 0 0 chr5 165216306 165216343 -37869189 + (TG)n Simple_repeat Simple_repeat 2 38 0 1836 136 38 3 chr5 165216343 165216462 -37869070 - AluSg SINE Alu -196 114 1 267 31 0 0 chr5 165216506 165216538 -37868994 + (TC)n Simple_repeat Simple_repeat 1 32 0 2065 132 7 0 chr5 165216538 165216834 -37868698 - AluSx SINE Alu -14 298 1 411 321 5 33 chr5 165217065 165217249 -37868283 - Charlie8 DNA MER1_type -2141 276 98 1393 49 0 0 chr5 165217253 165217416 -37868116 + L1PA8 LINE L1 6008 6170 -2 354 286 131 36 chr5 165218018 165218186 -37867346 + L2 LINE L2 2613 2796 -518 2167 112 27 0 chr5 165218220 165218514 -37867018 + AluSc SINE Alu 1 302 -7 1911 102 0 4 chr5 165218519 165218774 -37866758 + AluSg SINE Alu 40 293 -17 1944 153 0 7 chr5 165219127 165219427 -37866105 - AluJo SINE Alu -14 298 1 456 185 391 13 chr5 165219744 165219895 -37865637 + MER3 DNA MER1_type 2 209 0 2255 94 24 0 chr5 165219929 165220226 -37865306 + AluSx SINE Alu 1 304 -8 329 359 30 30 chr5 165220324 165220455 -37865077 + L2 LINE L2 2930 3060 -212 734 257 97 31 chr5 165221963 165222406 -37863126 - MLT1J LTR MaLR 0 511 3 287 266 84 77 chr5 165222442 165222711 -37862821 - L1MC4a LINE L1 -280 5884 5618 2286 98 3 7 chr5 165222711 165223017 -37862515 + AluSc SINE Alu 1 305 -4 287 266 84 77 chr5 165223017 165223075 -37862457 - L1MC4a LINE L1 -546 5618 5580 2251 99 24 0 chr5 165223075 165223369 -37862163 + AluSx SINE Alu 1 301 -11 287 266 84 77 chr5 165223369 165223429 -37862103 - L1MC4a LINE L1 -584 5580 5522 621 235 135 26 chr5 165223714 165223944 -37861588 - MIR SINE MIR -7 255 1 227 194 254 0 chr5 165224289 165224356 -37861176 + L2 LINE L2 2615 2698 -616 2194 118 3 3 chr5 165224376 165224680 -37860852 - AluSq SINE Alu -9 304 1 268 304 140 57 chr5 165224690 165225062 -37860470 + L2 LINE L2 2871 3273 -40 209 156 0 0 chr5 165225239 165225271 -37860261 - MIR SINE MIR -115 147 116 501 270 101 28 chr5 165226626 165226732 -37858800 - Charlie8 DNA MER1_type -131 199 73 1406 183 79 0 chr5 165226732 165226889 -37858643 - AluJo SINE Alu -11 301 158 216 0 0 0 chr5 165226889 165226913 -37858619 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1406 183 79 0 chr5 165226913 165227034 -37858498 - AluJo SINE Alu -154 158 1 501 270 101 28 chr5 165227034 165227105 -37858427 - Charlie8 DNA MER1_type -257 73 9 236 308 0 0 chr5 165227263 165227328 -37858204 + MIR3 SINE MIR 92 156 -52 497 284 148 16 chr5 165228052 165228235 -37857297 - MLT1I LTR MaLR 0 409 203 1965 138 0 3 chr5 165228324 165228607 -37856925 + AluSx SINE Alu 1 282 -30 347 255 137 0 chr5 165228813 165228915 -37856617 - MLT1I LTR MaLR -292 117 2 213 365 58 0 chr5 165229678 165229815 -37855717 + L2 LINE L2 2867 3011 -261 312 297 62 8 chr5 165230412 165230540 -37854992 + L2 LINE L2 3179 3313 0 1848 164 4 0 chr5 165230587 165230868 -37854664 + AluJb SINE Alu 5 286 -26 831 182 0 15 chr5 165230868 165231000 -37854532 - FLAM_A SINE Alu -3 130 1 809 137 0 0 chr5 165231392 165231516 -37854016 + AluSg/x SINE Alu 185 308 -4 280 292 21 10 chr5 165232243 165232339 -37853193 - MIR SINE MIR 0 262 166 545 271 40 7 chr5 165232723 165232874 -37852658 - MIR SINE MIR -94 168 13 355 290 75 75 chr5 165233625 165233714 -37851818 - MIR SINE MIR -32 230 142 2319 89 3 29 chr5 165233714 165234030 -37851502 - AluSq SINE Alu -1 312 5 355 290 75 75 chr5 165234030 165234140 -37851392 - MIR SINE MIR -119 143 31 562 253 74 88 chr5 165234603 165234888 -37850644 - MLT1K LTR MaLR 0 588 308 1634 182 61 0 chr5 165235177 165235474 -37850058 - MER58B DNA MER1_type 0 341 27 207 0 0 0 chr5 165235772 165235795 -37849737 + (T)n Simple_repeat Simple_repeat 1 23 0 26 0 0 0 chr5 165236444 165236470 -37849062 + AT_rich Low_complexity Low_complexity 1 26 0 2752 233 35 22 chr5 165236982 165237678 -37847854 - L1ME2 LINE L1 -9 6155 5451 1185 161 120 123 chr5 165237940 165238306 -37847226 - MLT1A1 LTR MaLR 0 365 1 618 267 182 0 chr5 165238393 165238629 -37846903 + HsTC2 DNA Tc2 505 783 -1115 26 30 0 0 chr5 165239489 165239522 -37846010 + AT_rich Low_complexity Low_complexity 1 33 0 2301 118 9 21 chr5 165239624 165239963 -37845569 - THE1B LTR MaLR 0 364 30 11337 100 5 3 chr5 165239963 165241465 -37844067 - THE1B-int LTR MaLR -75 1505 1 2367 155 28 19 chr5 165241465 165241826 -37843706 - THE1B LTR MaLR 0 364 1 1178 165 189 58 chr5 165241903 165242279 -37843253 + MSTC LTR MaLR 3 427 -1 398 269 120 6 chr5 165242295 165242462 -37843070 + MIR SINE MIR 60 245 -17 2141 123 10 3 chr5 165242909 165243211 -37842321 - AluSx SINE Alu -8 304 1 402 21 0 0 chr5 165243471 165243518 -37842014 + (TG)n Simple_repeat Simple_repeat 2 48 0 183 162 0 0 chr5 165243527 165243564 -37841968 + (TATG)n Simple_repeat Simple_repeat 2 38 0 207 281 83 21 chr5 165244399 165244495 -37841037 + MIR SINE MIR 88 189 -73 670 283 179 43 chr5 165244776 165245560 -37839972 - L2 LINE L2 0 3313 2445 247 191 0 0 chr5 165245831 165245878 -37839654 + MER103 DNA DNA 67 113 -53 328 247 247 6 chr5 165246115 165246277 -37839255 + MIR SINE MIR 48 248 -14 783 255 100 21 chr5 165246434 165246673 -37838859 - MIR SINE MIR -3 259 2 216 276 70 96 chr5 165246877 165247033 -37838499 + MIR SINE MIR 51 202 -60 586 210 153 44 chr5 165248012 165248241 -37837291 + MIR SINE MIR 5 258 -4 234 282 123 6 chr5 165248331 165248501 -37837031 + L2 LINE L2 3118 3307 -6 708 176 185 19 chr5 165248965 165249170 -37836362 - MER5C DNA MER1_type -82 242 4 347 287 81 44 chr5 165249625 165249650 -37835882 + MIR SINE MIR 13 36 -226 2142 129 0 0 chr5 165249650 165249936 -37835596 + AluSx SINE Alu 3 288 -24 347 287 81 44 chr5 165249936 165250046 -37835486 + MIR SINE MIR 36 153 -109 304 276 19 48 chr5 165250063 165250168 -37835364 - L2 LINE L2 -4 3268 3167 2191 122 0 0 chr5 165250460 165250755 -37834777 - AluSx SINE Alu -17 295 1 824 124 47 23 chr5 165251019 165251148 -37834384 - FLAM_C SINE Alu -1 132 1 1031 178 195 56 chr5 165251148 165251451 -37834081 + MLT1E1 LTR MaLR 2 346 -308 796 165 8 0 chr5 165251527 165251654 -37833878 + MLT1E1 LTR MaLR 527 654 0 217 367 97 68 chr5 165251876 165252124 -37833408 - L2 LINE L2 -16 3256 3002 1017 202 31 0 chr5 165252287 165252480 -37833052 + MER58A DNA MER1_type 26 224 0 2213 127 32 42 chr5 165252481 165252860 -37832672 + THE1C LTR MaLR 1 375 0 973 272 106 23 chr5 165252862 165253248 -37832284 + MLT1L LTR MaLR 146 563 -52 21 0 0 0 chr5 165253265 165253286 -37832246 + AT_rich Low_complexity Low_complexity 1 21 0 217 381 80 14 chr5 165253356 165253642 -37831890 - L2 LINE L2 -337 2977 2673 2256 142 27 15 chr5 165253643 165253975 -37831557 - MER1B DNA MER1_type -1 336 1 961 194 23 0 chr5 165254091 165254266 -37831266 + MER5A DNA MER1_type 11 189 0 7203 130 13 6 chr5 165254461 165255596 -37829936 - L1P LINE L1 -2047 4099 2957 4961 81 24 0 chr5 165255596 165256221 -37829311 + L1PA10 LINE L1 5521 6166 -2 2354 135 44 11 chr5 165256662 165257025 -37828507 + THE1C LTR MaLR 1 375 0 563 281 30 40 chr5 165257225 165257424 -37828108 + MER117 DNA MER1_type 1 197 0 433 256 77 24 chr5 165257440 165257608 -37827924 - MLT1K LTR MaLR -4 584 408 795 266 55 17 chr5 165257638 165257875 -37827657 - MIR SINE MIR 0 262 17 743 191 27 156 chr5 165257875 165258065 -37827467 + MER58A DNA MER1_type 1 214 -2206 2083 158 137 8 chr5 165258065 165258444 -37827088 - MSTA LTR MaLR 0 428 1 10432 135 9 35 chr5 165258446 165260064 -37825468 - MSTA-int LTR MaLR -2 1578 3 1407 198 81 35 chr5 165260066 165260414 -37825118 - THE1B LTR MaLR 0 364 1 743 191 27 156 chr5 165260414 165260474 -37825058 + MER58A DNA MER1_type 216 224 0 245 207 35 46 chr5 165261374 165261461 -37824071 - L1ME3A LINE L1 -1 6169 6084 744 276 118 0 chr5 165261630 165261945 -37823587 - L1ME3A LINE L1 -208 5962 5611 404 329 39 0 chr5 165262005 165262160 -37823372 - L1ME3A LINE L1 -532 5630 5470 659 324 144 9 chr5 165262563 165263014 -37822518 + L2 LINE L2 2326 2837 -477 243 277 48 36 chr5 165263640 165263723 -37821809 + MIR SINE MIR 34 117 -91 306 0 0 0 chr5 165264059 165264093 -37821439 + (TG)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr5 165264092 165264121 -37821411 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 3172 113 5 5 chr5 165264553 165264979 -37820553 - MSTA LTR MaLR -2 426 1 496 179 57 0 chr5 165266132 165266238 -37819294 - L2 LINE L2 -1 3312 3201 288 109 22 0 chr5 165266239 165266285 -37819247 - L2 LINE L2 -252 3061 3015 306 314 77 41 chr5 165266554 165266723 -37818809 + L2 LINE L2 2935 3109 -163 779 291 19 5 chr5 165266779 165266985 -37818547 - MIR SINE MIR -17 245 37 260 327 114 45 chr5 165266969 165267171 -37818361 + L2 LINE L2 3057 3272 0 * 238 270 175 22 chr5 165268008 165268145 -37817387 + MIR SINE MIR 99 256 -6 199 345 44 68 chr5 165268402 165268651 -37816881 + L2 LINE L2 3015 3257 -15 396 59 0 0 chr5 165268710 165268761 -37816771 + (CA)n Simple_repeat Simple_repeat 2 52 0 643 268 109 0 chr5 165268805 165268988 -37816544 + MIR SINE MIR 60 262 0 221 330 70 0 chr5 165269024 165269124 -37816408 + MIR SINE MIR 37 143 -65 263 305 131 11 chr5 165269276 165269430 -37816102 - MIR SINE MIR -65 143 16 558 189 0 0 chr5 165269569 165269659 -37815873 - 5S rRNA rRNA -31 90 1 220 242 48 16 chr5 165270867 165270929 -37814603 + MIR3 SINE MIR 95 158 -50 309 266 0 0 chr5 165271110 165271174 -37814358 - MER113 DNA MER1_type? -7 514 451 195 299 84 28 chr5 165271367 165271474 -37814058 - MIR SINE MIR -55 153 41 337 225 28 0 chr5 165271663 165271734 -37813798 + HsTC2 DNA Tc2 1 73 -1825 234 81 0 0 chr5 165273840 165273877 -37811655 + (T)n Simple_repeat Simple_repeat 1 37 0 243 329 61 12 chr5 165274951 165275033 -37810499 - MIR SINE MIR -146 116 31 558 307 78 14 chr5 165275206 165275424 -37810108 + MIR SINE MIR 20 251 -11 218 164 0 66 chr5 165275470 165275531 -37810001 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 182 330 22 33 chr5 165276622 165276713 -37808819 + MIR SINE MIR 24 113 -149 768 254 250 32 chr5 165276841 165277619 -37807913 - L2 LINE L2 -2 3311 2293 479 299 22 43 chr5 165277695 165277879 -37807653 - L2 LINE L2 -1997 1317 1138 562 286 38 38 chr5 165277988 165278198 -37807334 - MIR SINE MIR -41 221 12 1199 226 14 0 chr5 165279458 165279679 -37805853 - MER58A DNA MER1_type 0 224 1 3453 284 231 22 chr5 165280325 165282360 -37803172 + L2 LINE L2 246 2705 -609 456 126 175 0 chr5 165282366 165282469 -37803063 + L1MB7 LINE L1 6044 6164 -20 1672 79 0 0 chr5 165283129 165283332 -37802200 - L1PA7 LINE L1 -4 6150 5948 218 197 0 82 chr5 165283464 165283525 -37802007 + L2 LINE L2 3172 3227 -86 2327 173 100 10 chr5 165284283 165284763 -37800769 - L1MB7 LINE L1 -11 6173 5651 1215 192 212 4 chr5 165284793 165285043 -37800489 + AluJo SINE Alu 1 302 0 407 160 117 11 chr5 165285059 165285153 -37800379 + MIR SINE MIR 39 142 -120 771 150 0 0 chr5 165285191 165285304 -37800228 - L1PB4 LINE L1 -7 6149 6037 257 236 255 0 chr5 165285717 165285823 -37799709 + L2 LINE L2 3170 3302 -11 402 211 0 0 chr5 165285895 165285971 -37799561 + MER116 DNA Mariner 5 80 0 224 266 234 0 chr5 165286499 165286593 -37798939 + MIR SINE MIR 31 146 -116 709 284 75 8 chr5 165287161 165287400 -37798132 - MIR SINE MIR -2 260 6 379 316 8 26 chr5 165287513 165287630 -37797902 - L2 LINE L2 -36 3236 3122 427 281 61 30 chr5 165288138 165288302 -37797230 - MIR SINE MIR -54 208 40 263 249 337 16 chr5 165288533 165288726 -37796806 - MIR SINE MIR -1 261 7 * 362 247 100 58 chr5 165288661 165288851 -37796681 + MIR3 SINE MIR 8 205 -3 719 195 20 27 chr5 165289032 165289181 -37796351 - MER20 DNA MER1_type -71 148 1 492 325 77 24 chr5 165289840 165290049 -37795483 + MIR SINE MIR 6 225 -37 1326 211 40 17 chr5 165291296 165291595 -37793937 - MER58B DNA MER1_type -35 306 1 256 358 23 63 chr5 165291806 165291991 -37793541 + MIR SINE MIR 26 202 -60 2062 115 36 0 chr5 165291991 165292270 -37793262 + AluSg SINE Alu 1 289 -21 256 358 23 63 chr5 165292270 165292305 -37793227 + MIR SINE MIR 202 237 -25 2159 206 80 2 chr5 165292332 165292957 -37792575 + L1P LINE L1 3562 4272 -1874 44121 29 21 2 chr5 165292962 165298990 -37786542 + L1HS LINE L1 7 6153 -2 6682 133 42 8 chr5 165299011 165300979 -37784553 + L1MA2 LINE L1 4255 6298 -6 336 337 0 0 chr5 165301007 165301105 -37784427 - L2 LINE L2 -7 3265 3168 2302 89 3 0 chr5 165301174 165301466 -37784066 - AluSx SINE Alu -14 298 6 2221 173 45 61 chr5 165301489 165301997 -37783535 + MLT1D LTR MaLR 1 500 -5 285 195 18 142 chr5 165302606 165302719 -37782813 - MER102a DNA MER1_type -19 311 213 1138 117 105 89 chr5 165302721 165302968 -37782564 + AluSx SINE Alu 62 312 0 350 267 141 0 chr5 165302972 165303107 -37782425 - MER102a DNA MER1_type -106 224 71 200 250 0 0 chr5 165303526 165303570 -37781962 - MIR SINE MIR -112 150 107 298 237 119 0 chr5 165304780 165304880 -37780652 - MIR SINE MIR -63 145 34 300 283 33 0 chr5 165305627 165305719 -37779813 + MIR SINE MIR 45 139 -69 466 280 220 9 chr5 165305744 165305958 -37779574 - MIR SINE MIR 0 262 4 932 306 47 13 chr5 165307813 165308196 -37777336 + L2 LINE L2 2413 2808 -506 229 323 26 45 chr5 165308269 165308424 -37777108 + L2 LINE L2 2819 2970 -343 335 239 188 22 chr5 165308436 165308574 -37776958 + L2 LINE L2 3153 3313 0 272 329 131 15 chr5 165309018 165309155 -37776377 - L2 LINE L2 -118 3154 3002 2469 167 36 42 chr5 165309156 165309660 -37775872 + MLT1D LTR MaLR 5 505 0 592 199 175 18 chr5 165311121 165311287 -37774245 + MIR SINE MIR 32 223 -39 2255 119 0 0 chr5 165311429 165311724 -37773808 - AluSx SINE Alu -17 295 1 307 219 0 16 chr5 165312174 165312238 -37773294 - L2 LINE L2 0 3272 3210 * 2254 273 68 34 chr5 165312231 165313225 -37772307 + L2 LINE L2 1877 2904 -410 316 329 0 0 chr5 165313225 165313301 -37772231 + polypyrimidine Low_complexity Low_complexity 1 76 0 201 295 39 51 chr5 165313303 165313320 -37772212 + L2 LINE L2 2817 2833 -480 1968 135 0 4 chr5 165313320 165313594 -37771938 - AluSx SINE Alu -39 273 1 201 295 39 51 chr5 165313594 165313732 -37771800 + L2 LINE L2 2833 2970 -343 226 261 49 63 chr5 165313755 165313897 -37771635 + L2 LINE L2 3081 3220 -93 563 290 52 10 chr5 165313952 165314145 -37771387 + MIR SINE MIR 36 236 -26 725 207 60 0 chr5 165314289 165314439 -37771093 - MIR SINE MIR -27 235 77 2084 144 30 77 chr5 165315525 165315929 -37769603 + MLT1B LTR MaLR 4 388 -2 675 275 132 41 chr5 165315995 165316413 -37769119 - L2 LINE L2 -42 3271 2816 450 323 145 21 chr5 165317278 165317487 -37768045 + L2 LINE L2 2942 3124 -189 1582 225 85 61 chr5 165317487 165317812 -37767720 + MLT2B1 LTR ERVL 2 345 -175 2030 149 0 0 chr5 165317812 165318114 -37767418 - AluSx SINE Alu -10 302 1 1582 225 85 61 chr5 165318114 165318295 -37767237 + MLT2B1 LTR ERVL 345 520 0 450 323 145 21 chr5 165318295 165318416 -37767116 + L2 LINE L2 3124 3313 0 519 294 66 28 chr5 165318524 165318735 -37766797 - MIR SINE MIR -12 250 32 781 106 38 8 chr5 165318747 165318879 -37766653 - L1PA13 LINE L1 0 6163 6028 261 286 152 18 chr5 165319266 165319378 -37766154 - L2 LINE L2 -7 3265 3139 967 202 42 19 chr5 165320733 165320946 -37764586 + MER20 DNA MER1_type 1 218 -1 365 296 201 6 chr5 165321321 165321500 -37764032 + L2 LINE L2 2530 2743 -571 352 289 67 0 chr5 165322028 165322132 -37763400 - MIR SINE MIR -78 130 20 616 278 57 32 chr5 165322392 165322640 -37762892 - MIR SINE MIR 0 262 9 286 218 0 105 chr5 165323142 165323266 -37762266 + MER113 DNA MER1_type? 32 142 -379 596 286 84 26 chr5 165324559 165324786 -37760746 - MIR SINE MIR -21 241 2 207 0 0 0 chr5 165324971 165324994 -37760538 + (T)n Simple_repeat Simple_repeat 1 23 0 1881 171 0 0 chr5 165326239 165326538 -37758994 + AluJb SINE Alu 1 299 -13 234 62 0 0 chr5 165326648 165326680 -37758852 + (GA)n Simple_repeat Simple_repeat 1 32 0 531 292 40 40 chr5 165326706 165326932 -37758600 - L2 LINE L2 -1 3312 3087 1811 87 25 4 chr5 165326972 165327213 -37758319 + L1PB1 LINE L1 5905 6150 -1 879 220 71 0 chr5 165327345 165327527 -37758005 - MER58A DNA MER1_type -25 199 5 258 105 0 0 chr5 165327699 165327737 -37757795 + (A)n Simple_repeat Simple_repeat 1 38 0 335 372 31 0 chr5 165328074 165328236 -37757296 + MIR SINE MIR 28 197 -65 339 335 110 32 chr5 165329275 165329493 -37756039 + L2 LINE L2 2818 3052 -220 181 205 0 0 chr5 165329635 165329674 -37755858 + L2 LINE L2 3265 3303 -10 216 97 0 0 chr5 165330303 165330334 -37755198 + (TG)n Simple_repeat Simple_repeat 2 32 0 297 299 14 83 chr5 165330368 165330512 -37755020 - MIR SINE MIR -122 140 7 242 240 67 0 chr5 165330558 165330633 -37754899 + MER113 DNA MER1_type? 50 129 -392 868 210 83 19 chr5 165331497 165331702 -37753830 + MLT1J2 LTR MaLR 3 220 -230 214 258 16 16 chr5 165331918 165331980 -37753552 + L2 LINE L2 2289 2350 -964 802 302 150 31 chr5 165331987 165332712 -37752820 - L2 LINE L2 -35 3278 2449 1971 158 0 16 chr5 165332903 165333213 -37752319 - AluSx SINE Alu -7 305 1 412 267 38 40 chr5 165333283 165333458 -37752074 + L1ME3A LINE L1 5983 6148 -14 309 164 75 0 chr5 165333475 165333542 -37751990 + L1ME3A LINE L1 6099 6170 0 358 246 55 27 chr5 165334754 165334864 -37750668 - MER94 DNA DNA -21 113 1 220 248 38 95 chr5 165335612 165335717 -37749815 + MIR SINE MIR 43 141 -67 372 348 123 31 chr5 165335806 165336373 -37749159 - L2 LINE L2 -3 3269 2645 529 280 175 0 chr5 165336481 165336692 -37748840 - MIR SINE MIR -10 252 5 402 301 68 18 chr5 165337675 165337838 -37747694 - MIR SINE MIR -80 182 12 432 179 26 0 chr5 165337853 165337931 -37747601 - MER116 DNA Mariner 0 80 1 273 215 76 18 chr5 165338181 165338308 -37747224 - MIR SINE MIR -68 140 3 471 218 8 16 chr5 165338788 165338912 -37746620 + L2 LINE L2 2958 3080 -233 428 282 62 86 chr5 165338949 165339158 -37746374 - MIR SINE MIR -46 216 13 796 252 30 72 chr5 165339610 165339845 -37745687 - L2 LINE L2 -186 3127 2909 2032 132 10 10 chr5 165339845 165340148 -37745384 - 7SLRNA srpRNA srpRNA -6 314 12 796 252 30 72 chr5 165340148 165340245 -37745287 - L2 LINE L2 -404 2909 2809 218 147 0 0 chr5 165341455 165341489 -37744043 - L2 LINE L2 -9 3304 3271 362 262 160 55 chr5 165341981 165342218 -37743314 + Charlie2 DNA MER1_type 1 262 -2520 1509 251 117 11 chr5 165342285 165342850 -37742682 + Charlie2 DNA MER1_type 2230 2854 -8 309 321 22 22 chr5 165342850 165342984 -37742548 + MIR SINE MIR 15 148 -114 595 321 23 0 chr5 165343052 165343267 -37742265 - MIR SINE MIR -10 252 33 285 232 146 0 chr5 165344263 165344345 -37741187 - L2 LINE L2 0 3313 3220 890 223 94 20 chr5 165344562 165344764 -37740768 + MER20 DNA MER1_type 1 217 -2 270 186 35 12 chr5 165344894 165344980 -37740552 + (TA)n Simple_repeat Simple_repeat 2 89 0 182 237 0 0 chr5 165345665 165345703 -37739829 - L3 LINE CR1 -11 1566 1529 269 275 0 0 chr5 165345885 165345954 -37739578 - MER5B DNA MER1_type -3 175 107 1102 160 17 0 chr5 165345961 165346136 -37739396 + MSTD LTR MaLR 218 395 -1 26 50 0 0 chr5 165346185 165346225 -37739307 + AT_rich Low_complexity Low_complexity 1 40 0 253 309 55 0 chr5 165346268 165346433 -37739099 + L1ME4a LINE L1 5258 5431 -731 736 290 20 16 chr5 165346486 165346741 -37738791 - MIR SINE MIR -5 257 2 13125 122 106 26 chr5 165346954 165347302 -37738230 - Tigger1 DNA MER2_type 0 2418 2099 2207 125 0 0 chr5 165347302 165347605 -37737927 - AluSg1 SINE Alu -6 303 1 13125 122 106 26 chr5 165347605 165349494 -37736038 - Tigger1 DNA MER2_type -319 2099 1 279 285 149 75 chr5 165349511 165349806 -37735726 + L1ME4a LINE L1 5699 6017 -104 290 214 127 48 chr5 165349995 165350121 -37735411 - L3 LINE CR1 -212 1365 1230 212 247 112 45 chr5 165350325 165350414 -37735118 - L3 LINE CR1 -652 925 831 342 0 0 0 chr5 165350795 165350833 -37734699 + (CA)n Simple_repeat Simple_repeat 1 38 0 244 366 124 9 chr5 165351626 165351948 -37733584 - L3b LINE CR1 -123 1460 1102 396 296 122 21 chr5 165353100 165353289 -37732243 - MIR SINE MIR -2 260 53 357 301 0 21 chr5 165353572 165353665 -37731867 + L2 LINE L2 3178 3268 -4 285 319 67 34 chr5 165353732 165353851 -37731681 - MER5B DNA MER1_type -25 153 31 1316 219 118 25 chr5 165353867 165353933 -37731599 + MER113 DNA MER1_type? 2 60 -461 1982 142 4 0 chr5 165353933 165354255 -37731277 - AluSx SINE Alu 0 323 1 1316 219 118 25 chr5 165354255 165354661 -37730871 + MER113 DNA MER1_type? 60 519 -2 392 268 39 59 chr5 165354991 165355144 -37730388 - MIR SINE MIR 0 262 113 391 268 147 40 chr5 165357587 165357800 -37727732 - MIR SINE MIR -11 251 20 2124 112 4 0 chr5 165358405 165358714 -37726818 - AluSc SINE Alu 0 310 1 602 296 75 50 chr5 165359752 165360275 -37725257 + L2 LINE L2 2763 3305 -8 234 0 0 0 chr5 165360972 165360998 -37724534 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 1672 173 40 0 chr5 165361002 165361274 -37724258 - AluJb SINE Alu -29 283 1 185 179 0 51 chr5 165361301 165361340 -37724192 + L2 LINE L2 3184 3220 -93 * 211 321 36 0 chr5 165361308 165361364 -37724168 + L2 LINE L2 3148 3205 -67 14350 21 1 0 chr5 165361566 165363999 -37721533 + L1PA3 LINE L1 3717 6150 -5 686 263 61 19 chr5 165365917 165366130 -37719402 + MIR SINE MIR 30 251 -11 181 306 0 0 chr5 165366504 165366553 -37718979 - MER5B DNA MER1_type -58 120 72 232 246 0 0 chr5 165366667 165366724 -37718808 - L3 LINE CR1 -63 1514 1458 732 293 5 15 chr5 165366804 165367002 -37718530 + MIR SINE MIR 23 218 -44 304 290 45 12 chr5 165367858 165367991 -37717541 + MIR SINE MIR 15 150 -68 489 260 20 87 chr5 165368212 165368408 -37717124 + MER5A DNA MER1_type 7 189 0 182 219 152 133 chr5 165368442 165368547 -37716985 + L2 LINE L2 3179 3285 -28 458 254 14 70 chr5 165368638 165368780 -37716752 + MIR SINE MIR 11 144 -118 4090 219 82 22 chr5 165370539 165371547 -37713985 - L1M4b LINE L1 -5599 1260 192 408 329 15 7 chr5 165371928 165372065 -37713467 + MIR SINE MIR 4 141 -121 * 779 270 121 22 chr5 165372063 165372378 -37713154 - L2 LINE L2 0 3313 2968 360 244 70 9 chr5 165372368 165372483 -37713049 + MIR SINE MIR 141 262 0 * 201 121 0 0 chr5 165372924 165372957 -37712575 + (TG)n Simple_repeat Simple_repeat 2 34 0 184 290 16 0 chr5 165373130 165373192 -37712340 - MIR SINE MIR -73 189 127 605 309 88 10 chr5 165373317 165373521 -37712011 + MIR SINE MIR 5 224 -38 391 248 98 30 chr5 165373513 165373548 -37711984 + MIR SINE MIR 121 152 -110 * 1809 160 0 7 chr5 165373548 165373835 -37711697 + AluJb SINE Alu 14 298 -14 391 248 98 30 chr5 165373835 165373932 -37711600 + MIR SINE MIR 152 262 0 386 211 0 11 chr5 165373932 165374027 -37711505 + (CTA)n Simple_repeat Simple_repeat 1 94 0 249 57 0 0 chr5 165374157 165374192 -37711340 + (TG)n Simple_repeat Simple_repeat 1 35 0 346 312 71 22 chr5 165374957 165375166 -37710366 + MIR SINE MIR 41 260 -2 662 327 20 16 chr5 165376108 165376359 -37709173 - MIR SINE MIR -8 254 3 2697 82 6 0 chr5 165377055 165377408 -37708124 - THE1A LTR MaLR 0 355 1 11637 90 19 2 chr5 165377408 165378962 -37706570 - THE1A-int LTR MaLR 0 1580 1 2749 76 3 6 chr5 165378962 165379318 -37706214 - THE1A LTR MaLR 0 355 1 234 0 0 0 chr5 165379729 165379755 -37705777 + (A)n Simple_repeat Simple_repeat 1 26 0 1105 129 43 122 chr5 165379908 165380203 -37705329 + L1MA7 LINE L1 5886 6155 -16 863 179 20 26 chr5 165380209 165380404 -37705128 - L1PB4 LINE L1 0 6156 5963 831 123 37 6 chr5 165380404 165380567 -37704965 + L1MA7 LINE L1 6124 6291 0 787 305 65 4 chr5 165381182 165381428 -37704104 + MIR SINE MIR 2 262 0 378 292 103 77 chr5 165381984 165382179 -37703353 - L2 LINE L2 -30 3242 3043 444 253 118 34 chr5 165383547 165383725 -37701807 - MIR SINE MIR -62 200 8 371 369 107 19 chr5 165383818 165384192 -37701340 - L2 LINE L2 -4 3268 2862 246 268 0 0 chr5 165385174 165385230 -37700302 + MLT1J LTR MaLR 111 166 -345 * 646 263 74 82 chr5 165385206 165385609 -37699923 + MLT1L LTR MaLR 207 606 -9 262 299 63 155 chr5 165386680 165386951 -37698581 + L2 LINE L2 3000 3245 -27 377 274 26 35 chr5 165387406 165387519 -37698013 - L2 LINE L2 -19 3253 3142 875 115 8 184 chr5 165388337 165388571 -37696961 + 7SK RNA RNA 1 193 0 3781 268 114 20 chr5 165388605 165389106 -37696426 - L2 LINE L2 0 3313 2861 578 125 21 0 chr5 165389106 165389202 -37696330 + L1MB3 LINE L1 6077 6174 -9 3781 268 114 20 chr5 165389202 165390274 -37695258 - L2 LINE L2 -452 2861 1598 239 340 28 0 chr5 165390527 165390633 -37694899 + CT-rich Low_complexity Low_complexity 2 110 0 181 319 0 29 chr5 165391149 165391218 -37694314 - MIR SINE MIR -6 256 190 530 301 78 5 chr5 165391244 165391463 -37694069 - MIR SINE MIR -12 250 16 282 326 90 17 chr5 165391717 165391895 -37693637 + L2 LINE L2 3123 3313 0 269 208 19 0 chr5 165391914 165391967 -37693565 + L2 LINE L2 3004 3057 -215 251 331 0 123 chr5 165393776 165393906 -37691626 + L2 LINE L2 3134 3247 -25 1343 148 0 0 chr5 165393935 165394124 -37691408 + AluJb SINE Alu 106 294 -18 202 191 24 0 chr5 165394763 165394805 -37690727 - L2 LINE L2 -5 3267 3225 521 273 116 25 chr5 165394861 165395059 -37690473 + MIR SINE MIR 47 262 0 744 289 41 8 chr5 165395080 165395322 -37690210 + MIR SINE MIR 13 262 0 591 274 29 14 chr5 165395487 165395695 -37689837 + Charlie8 DNA MER1_type 57 267 -2150 230 219 0 96 chr5 165396395 165396468 -37689064 - L2 LINE L2 -13 3300 3235 285 224 0 0 chr5 165397463 165397521 -37688011 - L2 LINE L2 -2 3270 3213 830 229 61 19 chr5 165397680 165397894 -37687638 - MIR SINE MIR -37 225 3 397 285 104 54 chr5 165397907 165398142 -37687390 - MIR SINE MIR -13 249 4 260 329 31 93 chr5 165399559 165399720 -37685812 - MIR3 SINE MIR -27 181 31 249 308 128 17 chr5 165400026 165400143 -37685389 + L2 LINE L2 3139 3268 -4 770 248 31 47 chr5 165400269 165400431 -37685101 - MIR SINE MIR -6 256 98 1708 158 98 0 chr5 165400431 165400747 -37684785 + MER7A DNA MER2_type 2 346 0 770 248 31 47 chr5 165400747 165400838 -37684694 - MIR SINE MIR -164 98 7 195 293 81 103 chr5 165401717 165401891 -37683641 - MIR SINE MIR -79 183 14 190 254 113 0 chr5 165402691 165402762 -37682770 - MIR SINE MIR -48 214 136 * 1356 285 45 29 chr5 165402760 165403309 -37682223 + L2 LINE L2 2748 3312 -1 2426 82 0 3 chr5 165403645 165403951 -37681581 - AluY SINE Alu -6 305 1 484 174 0 18 chr5 165404220 165404329 -37681203 + CT-rich Low_complexity Low_complexity 4 110 0 1783 190 0 10 chr5 165404332 165404632 -37680900 - AluJb SINE Alu -15 297 1 497 143 31 20 chr5 165404660 165404758 -37680774 + MER53 DNA DNA 1 99 -90 507 294 35 0 chr5 165404781 165404924 -37680608 + MIR SINE MIR 115 262 0 273 274 12 0 chr5 165405657 165405741 -37679791 - L1ME4a LINE L1 -78 6043 5959 279 284 154 14 chr5 165406088 165406451 -37679081 + L1ME4a LINE L1 5708 6121 0 2318 78 0 3 chr5 165407225 165407521 -37678011 - AluY SINE Alu -16 295 1 309 232 123 29 chr5 165407979 165408117 -37677415 - L1ME4a LINE L1 -2 6119 5969 247 295 32 42 chr5 165408908 165409003 -37676529 - MIR SINE MIR 0 262 169 339 85 0 0 chr5 165409435 165409482 -37676050 + (TA)n Simple_repeat Simple_repeat 2 48 0 310 132 0 0 chr5 165409559 165409612 -37675920 - Charlie7 DNA MER1_type -2510 102 50 256 233 33 0 chr5 165409785 165409845 -37675687 - MIR SINE MIR -141 121 60 183 186 14 29 chr5 165410057 165410127 -37675405 + GA-rich Low_complexity Low_complexity 1 69 0 207 0 0 0 chr5 165410779 165410802 -37674730 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 165413172 165413193 -37672339 + AT_rich Low_complexity Low_complexity 1 21 0 539 286 133 55 chr5 165413571 165413879 -37671653 - MER102b DNA MER1_type -8 333 2 21 0 0 0 chr5 165415842 165415863 -37669669 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 165417098 165417122 -37668410 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr5 165419156 165419191 -37666341 + AT_rich Low_complexity Low_complexity 1 35 0 1674 145 0 4 chr5 165419191 165419440 -37666092 + AluJb SINE Alu 1 248 -64 1981 149 0 10 chr5 165469593 165469901 -37615631 + AluJo SINE Alu 1 305 -7 303 365 36 36 chr5 165469915 165470216 -37615316 + L1MC/D LINE L1 5451 5751 -2057 953 251 103 8 chr5 165470400 165470799 -37614733 + L1M4 LINE L1 2147 2583 -3563 376 286 51 57 chr5 165470797 165470972 -37614560 - L1ME3 LINE L1 -10 6152 5979 * 537 244 78 0 chr5 165471277 165471392 -37614140 + FLAM_A SINE Alu 5 128 -5 450 276 110 0 chr5 165471823 165471968 -37613564 + MIR SINE MIR 31 191 -71 1673 214 9 6 chr5 165472428 165472770 -37612762 - MLT1A1 LTR MaLR 0 365 23 1581 129 26 0 chr5 165473040 165473272 -37612260 - AluSx SINE Alu -74 238 1 389 270 128 20 chr5 165473604 165473821 -37611711 - MIR SINE MIR 0 262 25 1836 167 18 15 chr5 165473863 165474193 -37611339 + MER44D DNA MER2_type 1 601 -8 243 316 82 64 chr5 165474746 165474917 -37610615 + MER5A DNA MER1_type 16 189 0 275 218 0 0 chr5 165474919 165474974 -37610558 + Tigger5 DNA MER2_type 1 55 -2268 * 348 186 0 14 chr5 165474944 165475014 -37610518 + Tigger5 DNA MER2_type 2252 2320 -3 1118 122 53 11 chr5 165476294 165476483 -37609049 - MSTA LTR MaLR -231 197 1 1320 170 22 0 chr5 165476485 165476709 -37608823 - AluJo SINE Alu -81 231 3 26 0 0 0 chr5 165477062 165477088 -37608444 + AT_rich Low_complexity Low_complexity 1 26 0 2296 88 10 3 chr5 165477296 165477593 -37607939 - AluSq SINE Alu -14 299 1 446 248 116 23 chr5 165478093 165478222 -37607310 - MIR3 SINE MIR -21 187 47 243 317 73 0 chr5 165478403 165478485 -37607047 + MIR3 SINE MIR 110 197 -11 369 283 0 0 chr5 165478855 165478951 -37606581 + MIR SINE MIR 52 143 -65 374 276 153 12 chr5 165479951 165480121 -37605411 - MIR SINE MIR -6 256 63 2128 110 0 16 chr5 165480375 165480684 -37604848 + AluSg SINE Alu 1 304 -6 994 206 19 5 chr5 165480686 165480895 -37604637 - L1ME LINE L1 -583 5583 5372 1801 165 7 13 chr5 165482589 165482892 -37602640 + AluJb SINE Alu 1 301 -11 1909 145 3 3 chr5 165483033 165483315 -37602217 + AluSx SINE Alu 14 295 -17 2129 122 0 0 chr5 165484363 165484658 -37600874 - AluSx SINE Alu -16 296 2 2072 139 0 0 chr5 165484714 165485008 -37600524 + AluSx SINE Alu 11 304 -8 21 0 0 0 chr5 165485379 165485400 -37600132 + AT_rich Low_complexity Low_complexity 1 21 0 1229 203 68 14 chr5 165485440 165485735 -37599797 - AluJo SINE Alu -1 311 1 204 286 83 12 chr5 165485802 165485886 -37599646 + MIR SINE MIR 168 257 -5 727 197 1 0 chr5 165485893 165486034 -37599498 + Charlie5 DNA MER1_type 1 127 -2485 * 931 191 69 5 chr5 165486031 165486235 -37599297 + Charlie5 DNA MER1_type 2234 2450 -162 2257 92 0 20 chr5 165486236 165486542 -37598990 + AluSx SINE Alu 1 300 -12 206 246 0 14 chr5 165487174 165487243 -37598289 + (TTA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 30 chr5 165487662 165487679 -37597853 + AT_rich Low_complexity Low_complexity 1 18 -14 2189 133 0 0 chr5 165487679 165487979 -37597553 + AluSx SINE Alu 1 300 -12 22 0 0 30 chr5 165487979 165487994 -37597538 + AT_rich Low_complexity Low_complexity 18 32 0 431 325 130 19 chr5 165488039 165488415 -37597117 + L1MC4a LINE L1 5496 5913 -1895 21 0 0 0 chr5 165490258 165490279 -37595253 + AT_rich Low_complexity Low_complexity 1 21 0 551 286 133 55 chr5 165490657 165490965 -37594567 - MER102b DNA MER1_type -8 333 2 21 0 0 0 chr5 165492928 165492949 -37592583 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 165494184 165494208 -37591324 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr5 165496242 165496277 -37589255 + AT_rich Low_complexity Low_complexity 1 35 0 1971 145 0 3 chr5 165496277 165496574 -37588958 + AluJb SINE Alu 1 296 -16 399 41 0 0 chr5 165496595 165496644 -37588888 + (TG)n Simple_repeat Simple_repeat 2 50 0 531 217 6 42 chr5 165496644 165496800 -37588732 - L1ME1 LINE L1 -32 6134 5980 266 268 0 0 chr5 165497652 165497708 -37587824 + MLT1J LTR MaLR 111 166 -345 * 336 133 10 174 chr5 165497684 165497782 -37587750 + MLT1L LTR MaLR 207 288 -327 537 257 136 52 chr5 165498020 165498292 -37587240 + MLT1L LTR MaLR 312 606 -9 250 315 110 55 chr5 165499380 165499634 -37585898 + L2 LINE L2 3019 3286 -27 373 274 26 35 chr5 165500089 165500202 -37585330 - L2 LINE L2 -19 3253 3142 960 115 8 184 chr5 165501021 165501255 -37584277 + 7SK RNA RNA 1 193 0 3735 268 114 18 chr5 165501289 165501790 -37583742 - L2 LINE L2 0 3313 2862 622 120 40 0 chr5 165501790 165501890 -37583642 + L1MB3 LINE L1 6077 6180 -3 3735 268 114 18 chr5 165501890 165502958 -37582574 - L2 LINE L2 -451 2862 1598 239 340 28 0 chr5 165503211 165503317 -37582215 + CT-rich Low_complexity Low_complexity 2 110 0 183 319 0 29 chr5 165503833 165503902 -37581630 - MIR SINE MIR -6 256 190 489 309 68 0 chr5 165503928 165504148 -37581384 - MIR SINE MIR -12 250 16 272 326 90 17 chr5 165504402 165504580 -37580952 + L2 LINE L2 3123 3313 0 268 208 19 0 chr5 165504599 165504652 -37580880 + L2 LINE L2 3004 3057 -215 248 331 0 123 chr5 165506461 165506591 -37578941 + L2 LINE L2 3134 3247 -25 1326 148 0 0 chr5 165506620 165506809 -37578723 + AluJb SINE Alu 106 294 -18 200 191 24 0 chr5 165507448 165507490 -37578042 - L2 LINE L2 -5 3267 3225 516 268 116 25 chr5 165507546 165507744 -37577788 + MIR SINE MIR 47 262 0 725 289 41 8 chr5 165507765 165508007 -37577525 + MIR SINE MIR 13 262 0 674 269 29 14 chr5 165508172 165508380 -37577152 + Charlie8 DNA MER1_type 57 267 -2150 224 219 0 96 chr5 165509080 165509153 -37576379 - L2 LINE L2 -13 3300 3235 288 224 0 0 chr5 165510148 165510206 -37575326 - L2 LINE L2 -2 3270 3213 815 229 61 19 chr5 165510365 165510579 -37574953 - MIR SINE MIR -37 225 3 381 282 105 55 chr5 165510592 165510827 -37574705 - MIR SINE MIR -13 249 4 573 301 188 58 chr5 165511303 165511649 -37573883 + L2 LINE L2 2882 3272 0 553 299 5 10 chr5 165511798 165511992 -37573540 + L1ME3 LINE L1 5961 6153 -9 371 369 107 19 chr5 165512112 165512486 -37573046 + L2 LINE L2 2862 3268 -4 444 253 118 34 chr5 165512579 165512757 -37572775 + MIR SINE MIR 8 200 -62 378 292 103 77 chr5 165514124 165514319 -37571213 + L2 LINE L2 3043 3242 -30 787 305 65 4 chr5 165514875 165515121 -37570411 - MIR SINE MIR 0 262 2 831 123 37 6 chr5 165515736 165515899 -37569633 - L1MA7 LINE L1 0 6291 6124 863 179 20 26 chr5 165515899 165516094 -37569438 + L1PB4 LINE L1 5963 6156 0 1105 129 43 122 chr5 165516100 165516395 -37569137 - L1MB2 LINE L1 -16 6155 5886 216 0 0 0 chr5 165516548 165516572 -37568960 + (T)n Simple_repeat Simple_repeat 1 24 0 2749 76 3 6 chr5 165516983 165517339 -37568193 + THE1A LTR MaLR 1 355 0 11637 90 19 2 chr5 165517339 165518893 -37566639 + THE1A-int LTR MaLR 1 1580 0 2697 82 6 0 chr5 165518893 165519246 -37566286 + THE1A LTR MaLR 1 355 0 662 327 20 16 chr5 165519942 165520193 -37565339 + MIR SINE MIR 3 254 -8 346 312 71 22 chr5 165521135 165521344 -37564188 - MIR SINE MIR -2 260 41 249 57 0 0 chr5 165522109 165522144 -37563388 + (CA)n Simple_repeat Simple_repeat 1 35 0 365 221 0 11 chr5 165522274 165522369 -37563163 + (TAG)n Simple_repeat Simple_repeat 1 94 0 391 248 98 30 chr5 165522369 165522466 -37563066 - MIR SINE MIR 0 262 152 1809 160 0 7 chr5 165522466 165522753 -37562779 - AluJb SINE Alu -14 298 14 391 248 98 30 chr5 165522753 165522788 -37562744 - MIR SINE MIR -110 152 121 * 605 309 88 10 chr5 165522780 165522984 -37562548 - MIR SINE MIR -38 224 5 184 290 16 0 chr5 165523109 165523171 -37562361 + MIR SINE MIR 127 189 -73 387 118 176 0 chr5 165523246 165523314 -37562218 + MADE1 DNA Mariner 1 80 0 235 274 81 57 chr5 165523504 165523628 -37561904 + L3 LINE CR1 634 760 -817 279 211 0 0 chr5 165524275 165524327 -37561205 - L2 LINE L2 -1 3312 3261 2673 90 8 16 chr5 165524363 165524741 -37560791 + THE1C LTR MaLR 1 375 0 588 269 128 9 chr5 165524744 165524963 -37560569 - MIR SINE MIR -1 261 17 1173 157 62 4 chr5 165525299 165525573 -37559959 - MER33 DNA MER1_type 0 324 35 305 302 113 0 chr5 165525815 165525921 -37559611 + L2 LINE L2 3154 3271 -1 199 302 16 48 chr5 165525944 165526007 -37559525 - MIR SINE MIR -194 68 8 1185 134 0 0 chr5 165526203 165526374 -37559158 + AluJb SINE Alu 137 307 -5 2553 59 0 0 chr5 165526524 165526827 -37558705 + AluY SINE Alu 1 303 -8 359 330 35 98 chr5 165527315 165527435 -37558097 - L2 LINE L2 -90 3182 3056 1629 192 10 17 chr5 165527435 165527727 -37557805 - AluJb SINE Alu -20 292 3 359 330 35 98 chr5 165527727 165527982 -37557550 - L2 LINE L2 -216 3056 2831 181 381 104 22 chr5 165528142 165528276 -37557256 + L2 LINE L2 3126 3270 -2 450 0 0 0 chr5 165528983 165529033 -37556499 + (CA)n Simple_repeat Simple_repeat 1 50 0 241 243 14 27 chr5 165529251 165529325 -37556207 + MER5A DNA MER1_type 2 74 -115 1040 83 0 0 chr5 165529327 165529460 -37556072 + AluSc SINE Alu 162 294 -15 456 274 0 10 chr5 165529460 165529562 -37555970 + MER5A DNA MER1_type 66 166 -23 2556 142 36 34 chr5 165531062 165531528 -37554004 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr5 165532030 165532052 -37553480 + AT_rich Low_complexity Low_complexity 1 22 0 492 48 0 0 chr5 165533560 165533623 -37551909 + (GA)n Simple_repeat Simple_repeat 2 64 0 249 268 37 37 chr5 165533650 165533732 -37551800 + MIR SINE MIR 32 113 -95 210 237 0 0 chr5 165533974 165534012 -37551520 + MIR SINE MIR 95 132 -76 2211 118 0 10 chr5 165534084 165534390 -37551142 + AluSg SINE Alu 1 303 -7 233 291 164 36 chr5 165535203 165535368 -37550164 - MIR SINE MIR -46 216 31 239 308 51 13 chr5 165535418 165535496 -37550036 + L2 LINE L2 3210 3290 -23 2052 257 28 5 chr5 165535788 165536352 -37549180 + MER119 DNA MER1_type 7 583 0 652 276 63 18 chr5 165536447 165536668 -37548864 - MIR SINE MIR -12 250 20 3923 154 49 79 chr5 165536678 165537820 -37547712 - L1MD1 LINE L1 -5 6237 5135 1381 227 51 58 chr5 165537960 165538007 -37547525 - L1MD1 LINE L1 -1052 5094 5048 2445 57 37 0 chr5 165538007 165538307 -37547225 - AluY SINE Alu 0 311 1 1381 227 51 58 chr5 165538307 165538809 -37546723 - L1MD1 LINE L1 -1098 5048 4549 381 246 131 29 chr5 165539048 165539223 -37546309 - Charlie8 DNA MER1_type -2141 276 84 207 310 45 91 chr5 165539305 165539547 -37545985 - L2 LINE L2 -84 3188 2958 207 320 247 13 chr5 165539805 165539955 -37545577 + L2 LINE L2 2772 2956 -358 1041 264 219 5 chr5 165540002 165540720 -37544812 - L2 LINE L2 -50 3263 2395 642 288 132 28 chr5 165540742 165541030 -37544502 + L2 LINE L2 2990 3307 -6 305 281 76 41 chr5 165541133 165541304 -37544228 - L2 LINE L2 -38 3275 3099 341 303 67 0 chr5 165541594 165541713 -37543819 + MIR SINE MIR 135 261 -1 209 304 0 0 chr5 165541774 165541830 -37543702 + L2 LINE L2 3217 3272 0 422 324 106 15 chr5 165542546 165542886 -37542646 + L1MC4a LINE L1 5542 5912 -1896 2201 221 25 40 chr5 165542890 165543451 -37542081 + MLT1F1 LTR MaLR 1 654 0 801 259 28 78 chr5 165544950 165545205 -37540327 + MIR SINE MIR 17 258 -4 246 314 223 15 chr5 165545255 165545708 -37539824 - L2 LINE L2 -3 3269 2703 367 302 29 35 chr5 165546660 165546830 -37538702 + MIR3 SINE MIR 13 185 -77 23 0 0 0 chr5 165546850 165546873 -37538659 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 165546920 165546943 -37538589 + AT_rich Low_complexity Low_complexity 1 23 0 362 297 31 23 chr5 165546983 165547111 -37538421 + L2 LINE L2 3184 3312 -1 286 258 24 97 chr5 165547919 165548043 -37537489 + L2 LINE L2 2967 3081 -191 21 57 0 0 chr5 165548220 165548255 -37537277 + AT_rich Low_complexity Low_complexity 1 35 0 226 264 42 14 chr5 165548477 165548549 -37536983 + MIR SINE MIR 176 249 -13 651 277 126 0 chr5 165548571 165548777 -37536755 - MIR SINE MIR -3 259 28 6434 31 60 0 chr5 165549243 165550037 -37535495 + L1PA4 LINE L1 5311 6152 -3 212 298 380 0 chr5 165550079 165550237 -37535295 + MIR SINE MIR 28 245 -17 514 210 0 58 chr5 165550720 165550875 -37534657 + MIR SINE MIR 101 245 -17 212 416 0 0 chr5 165551019 165551108 -37534424 + L2 LINE L2 3184 3272 0 373 296 10 61 chr5 165551755 165551951 -37533581 + MIR SINE MIR 75 260 -2 213 380 43 0 chr5 165552061 165552153 -37533379 - L2 LINE L2 -9 3304 3209 1677 175 4 18 chr5 165552155 165552435 -37533097 - AluJo SINE Alu -35 277 2 22 0 0 0 chr5 165552438 165552460 -37533072 + AT_rich Low_complexity Low_complexity 1 22 0 254 258 167 23 chr5 165552633 165552765 -37532767 - L2 LINE L2 -480 2834 2684 189 107 0 0 chr5 165553229 165553257 -37532275 + (CA)n Simple_repeat Simple_repeat 2 29 0 408 276 96 6 chr5 165554937 165555093 -37530439 - MIR SINE MIR -21 241 72 2251 92 27 0 chr5 165555175 165555470 -37530062 + AluSx SINE Alu 5 307 -5 234 174 0 0 chr5 165555923 165555969 -37529563 + (CATA)n Simple_repeat Simple_repeat 2 47 0 2325 135 36 0 chr5 165555973 165556366 -37529166 - L1MC1 LINE L1 -8 6325 5919 1799 159 0 0 chr5 165556472 165556736 -37528796 - AluJb SINE Alu -13 299 36 426 279 144 66 chr5 165556836 165557169 -37528363 + L2 LINE L2 2545 2903 -411 1593 163 26 0 chr5 165557286 165557556 -37527976 - AluSx SINE Alu -15 297 21 1063 148 28 11 chr5 165557626 165557802 -37527730 + MER5A DNA MER1_type 1 179 -10 340 326 123 0 chr5 165558087 165558225 -37527307 - L2 LINE L2 0 3272 3118 426 221 186 56 chr5 165558264 165558445 -37527087 + L1ME4a LINE L1 5588 5744 -377 2183 119 0 22 chr5 165558445 165558756 -37526776 + AluSx SINE Alu 1 304 -8 426 221 186 56 chr5 165558756 165559021 -37526511 + L1ME4a LINE L1 5744 6092 -29 297 243 178 0 chr5 165559982 165560089 -37525443 + MLT1J LTR MaLR 2 127 -384 437 265 44 15 chr5 165560122 165560258 -37525274 + MLT1J2 LTR MaLR 37 176 -274 638 288 52 8 chr5 165560346 165560613 -37524919 + L1MC4a LINE L1 5625 5903 -1905 387 232 61 10 chr5 165560622 165560721 -37524811 - L2 LINE L2 -11 3302 3199 189 0 0 0 chr5 165560781 165560802 -37524730 + (TA)n Simple_repeat Simple_repeat 1 21 0 385 263 75 44 chr5 165562510 165562670 -37522862 + MIR SINE MIR 98 262 0 198 286 31 20 chr5 165562740 165562838 -37522694 + L3 LINE CR1 1317 1415 -162 6868 199 36 28 chr5 165562851 165562904 -37522628 + L1MB4 LINE L1 3305 3356 -2824 2278 125 0 0 chr5 165562904 165563216 -37522316 + AluSx SINE Alu 1 312 0 6868 199 36 28 chr5 165563216 165566016 -37519516 + L1MB4 LINE L1 3356 6179 -1 389 344 28 28 chr5 165566247 165566427 -37519105 + L3 LINE CR1 1397 1576 -1 21 0 0 0 chr5 165567948 165567969 -37517563 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 165568650 165568681 -37516851 + AT_rich Low_complexity Low_complexity 1 31 0 198 225 56 70 chr5 165568757 165568828 -37516704 - L2 LINE L2 -12 3301 3232 361 333 108 17 chr5 165569412 165569501 -37516031 - MIR SINE MIR -9 253 173 405 0 0 0 chr5 165569501 165569546 -37515986 + (TA)n Simple_repeat Simple_repeat 1 45 0 361 333 108 17 chr5 165569546 165569687 -37515845 - MIR SINE MIR -89 173 2 2394 149 49 2 chr5 165570229 165570638 -37514894 + MSTA LTR MaLR 1 428 0 243 209 52 0 chr5 165571163 165571278 -37514254 + GA-rich Low_complexity Low_complexity 1 121 0 322 314 57 0 chr5 165571434 165571558 -37513974 + L1ME4a LINE L1 5718 5848 -273 23 54 0 0 chr5 165573414 165573451 -37512081 + AT_rich Low_complexity Low_complexity 1 37 0 351 256 215 8 chr5 165573497 165573618 -37511914 + HAL1b LINE L1 746 891 -457 2028 149 0 3 chr5 165573630 165573939 -37511593 + AluJo SINE Alu 1 308 -4 2433 123 3 5 chr5 165574154 165574545 -37510987 + L1MA4 LINE L1 5904 6293 -7 382 266 21 0 chr5 165575355 165575449 -37510083 - MIR SINE MIR -115 147 52 534 323 64 26 chr5 165575533 165575846 -37509686 - MER102b DNA MER1_type -3 338 14 271 192 27 0 chr5 165575848 165575921 -37509611 + CT-rich Low_complexity Low_complexity 2 76 0 2151 146 0 0 chr5 165575925 165576233 -37509299 - AluSx SINE Alu -4 308 1 1848 144 17 10 chr5 165576818 165577117 -37508415 + AluSx SINE Alu 1 301 -11 285 171 271 0 chr5 165577276 165577346 -37508186 + L2 LINE L2 3184 3272 0 566 306 131 13 chr5 165577909 165578291 -37507241 - L2 LINE L2 -1 3312 2886 215 152 22 0 chr5 165579758 165579804 -37505728 + (TG)n Simple_repeat Simple_repeat 2 48 0 395 281 16 8 chr5 165579812 165579933 -37505599 + MLT1K LTR MaLR 160 281 -307 248 340 21 0 chr5 165579950 165580044 -37505488 + L2 LINE L2 2867 2962 -310 312 343 107 28 chr5 165580165 165580381 -37505151 + MLT1K LTR MaLR 19 251 -337 2650 277 98 13 chr5 165580743 165581844 -37503688 - L2 LINE L2 0 3313 2136 504 227 26 129 chr5 165581856 165582050 -37503482 - MIR SINE MIR -69 193 20 227 321 99 38 chr5 165582276 165582407 -37503125 + MER5A DNA MER1_type 45 183 -6 341 243 0 14 chr5 165583466 165583540 -37501992 + MIR SINE MIR 120 192 -70 2823 141 100 34 chr5 165583541 165584181 -37501351 + L1MA9 LINE L1 5630 6311 -1 235 272 76 43 chr5 165584828 165584920 -37500612 - L2 LINE L2 -5 3267 3173 281 279 0 51 chr5 165584943 165585022 -37500510 + L2 LINE L2 3239 3313 0 592 316 77 8 chr5 165587023 165587257 -37498275 - MIR SINE MIR 0 262 13 26 50 0 0 chr5 165588555 165588595 -37496937 + AT_rich Low_complexity Low_complexity 1 40 0 238 308 0 33 chr5 165588596 165588687 -37496845 - MIR SINE MIR -1 261 174 3268 138 36 40 chr5 165589138 165589278 -37496254 + L1MA9 LINE L1 5649 5788 -524 324 70 0 0 chr5 165589278 165589321 -37496211 + (CA)n Simple_repeat Simple_repeat 2 44 0 3268 138 36 40 chr5 165589321 165589847 -37495685 + L1MA9 LINE L1 5788 6312 0 631 265 114 9 chr5 165589953 165590172 -37495360 + MIR SINE MIR 20 261 -1 544 288 73 17 chr5 165592057 165592234 -37493298 + MIR SINE MIR 12 198 -64 2219 102 0 0 chr5 165592250 165592543 -37492989 + AluY SINE Alu 1 293 -18 857 231 33 37 chr5 165592560 165592803 -37492729 - MIR SINE MIR 0 262 21 180 98 49 98 chr5 165593872 165593913 -37491619 - L2 LINE L2 -576 2738 2700 319 331 101 0 chr5 165595255 165595394 -37490138 + MIR3 SINE MIR 42 194 -14 * 487 281 157 0 chr5 165595393 165595546 -37489986 + MER5A DNA MER1_type 13 189 0 201 349 12 0 chr5 165595546 165595587 -37489945 + MIR3 SINE MIR 161 202 -6 749 216 72 19 chr5 165595885 165596093 -37489439 - MIR SINE MIR -32 230 12 2439 92 0 6 chr5 165596150 165596465 -37489067 - AluSq SINE Alu 0 313 1 845 212 106 5 chr5 165596550 165596739 -37488793 - MER3 DNA MER1_type -1 208 1 333 0 0 0 chr5 165597324 165597361 -37488171 + (TG)n Simple_repeat Simple_repeat 1 37 0 844 292 82 47 chr5 165597805 165598419 -37487113 - L2 LINE L2 -140 3173 2430 482 273 62 33 chr5 165598429 165598529 -37487003 - MIR SINE MIR -27 235 139 2064 154 33 33 chr5 165598529 165598893 -37486639 - THE1B LTR MaLR 0 364 1 482 273 62 33 chr5 165598893 165599020 -37486512 - MIR SINE MIR -123 139 3 2431 32 0 0 chr5 165599096 165599380 -37486152 - L1PA5 LINE L1 -7 6147 5864 2092 99 14 14 chr5 165599380 165599663 -37485869 - AluSc SINE Alu -26 283 1 256 287 0 153 chr5 165599875 165599923 -37485609 + L2 LINE L2 3141 3195 -77 2377 68 0 23 chr5 165599923 165600232 -37485300 - AluY SINE Alu -9 302 1 256 287 0 153 chr5 165600232 165600333 -37485199 + L2 LINE L2 3195 3267 -5 314 258 66 77 chr5 165600430 165600612 -37484920 + MIR SINE MIR 33 212 -50 182 307 147 33 chr5 165600679 165600829 -37484703 + MIR SINE MIR 23 189 -73 261 252 8 50 chr5 165600829 165600948 -37484584 + FRAM SINE Alu 37 150 -16 491 181 51 0 chr5 165600948 165601086 -37484446 + L1PA5 LINE L1 5864 6008 -146 288 0 0 0 chr5 165601618 165601650 -37483882 + (TA)n Simple_repeat Simple_repeat 1 32 0 419 136 6 56 chr5 165601726 165601888 -37483644 + (TA)n Simple_repeat Simple_repeat 1 154 0 1134 126 6 0 chr5 165601899 165602073 -37483459 - THE1B LTR MaLR -189 175 1 280 246 87 0 chr5 165602073 165602142 -37483390 - MIR SINE MIR -129 133 59 211 197 0 26 chr5 165602143 165602219 -37483313 + (TA)n Simple_repeat Simple_repeat 2 75 0 235 286 36 0 chr5 165602221 165602277 -37483255 + MIR SINE MIR 197 254 -8 3519 116 109 34 chr5 165603401 165604073 -37481459 + MER50 LTR ERV1 1 722 -12 376 307 94 42 chr5 165604109 165604396 -37481136 - L3 LINE CR1 -16 1561 1260 328 333 54 0 chr5 165604417 165604528 -37481004 + L2 LINE L2 3197 3313 0 232 272 68 10 chr5 165604564 165604667 -37480865 - MER102a DNA MER1_type -1 329 221 618 298 145 11 chr5 165604899 165605161 -37480371 - L3 LINE CR1 -191 1386 1090 231 259 91 50 chr5 165605172 165605192 -37480340 + L1ME LINE L1 5705 5723 -398 1627 156 30 7 chr5 165605192 165605461 -37480071 + AluJo SINE Alu 14 288 -24 231 259 91 50 chr5 165605461 165605660 -37479872 + L1ME LINE L1 5723 5933 -188 320 274 40 68 chr5 165605828 165605980 -37479552 - MER5B DNA MER1_type -28 161 4 410 309 119 21 chr5 165605982 165606309 -37479223 - L3 LINE CR1 -562 1015 657 467 203 49 0 chr5 165606482 165606605 -37478927 - L1MA8 LINE L1 -16 6275 6147 593 276 131 81 chr5 165606960 165607366 -37478166 + L2 LINE L2 2847 3272 0 549 250 109 5 chr5 165607620 165607804 -37477728 - MIR SINE MIR -6 256 54 272 385 33 8 chr5 165607816 165607938 -37477594 + MIR SINE MIR 16 140 -68 964 116 1 3 chr5 165608731 165608911 -37476621 + L1MA6 LINE L1 5552 5730 -435 2815 108 79 2 chr5 165608921 165609404 -37476128 + L1MA6 LINE L1 5781 6300 0 614 297 57 43 chr5 165609679 165610100 -37475432 + L2 LINE L2 2241 2667 -647 222 297 144 8 chr5 165610606 165610724 -37474808 + MIR SINE MIR 18 151 -111 219 315 27 36 chr5 165610957 165611068 -37474464 - MIR SINE MIR -105 157 48 591 335 94 21 chr5 165611295 165611871 -37473661 + L2 LINE L2 2688 3313 0 2294 102 0 0 chr5 165612249 165612553 -37472979 - AluY SINE Alu -7 304 1 1926 106 74 21 chr5 165613792 165614076 -37471456 - AluSq SINE Alu -14 299 1 373 211 74 42 chr5 165614664 165614759 -37470773 + MIR SINE MIR 48 145 -117 192 200 100 0 chr5 165616012 165616052 -37469480 + L2 LINE L2 3256 3299 -14 180 320 77 26 chr5 165616113 165616191 -37469341 + L2 LINE L2 3141 3222 -50 358 275 11 11 chr5 165616628 165616719 -37468813 - L2 LINE L2 -48 3265 3175 288 70 0 0 chr5 165617056 165617099 -37468433 + (CAGAGA)n Simple_repeat Simple_repeat 4 46 0 24 53 0 0 chr5 165617290 165617328 -37468204 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 165618278 165618299 -37467233 + AT_rich Low_complexity Low_complexity 1 21 0 653 325 43 0 chr5 165618909 165619143 -37466389 + MIR SINE MIR 9 252 -10 312 276 81 16 chr5 165619265 165619388 -37466144 + MIR SINE MIR 118 248 -14 210 342 0 0 chr5 165619413 165619489 -37466043 + MIR SINE MIR 150 225 -37 745 107 10 0 chr5 165619584 165619687 -37465845 - AluSx SINE Alu -17 293 190 1001 138 7 0 chr5 165619688 165619826 -37465706 - AluSx SINE Alu -174 139 1 1819 174 31 11 chr5 165619911 165620267 -37465265 + Tigger3b DNA MER2_type 1 363 -868 2263 124 0 0 chr5 165620270 165620577 -37464955 + AluSx SINE Alu 2 308 -4 826 38 0 19 chr5 165620582 165620687 -37464845 + L1PA10 LINE L1 6064 6166 -2 1056 90 6 66 chr5 165620695 165620861 -37464671 + AluSg/x SINE Alu 134 289 -23 4808 111 58 25 chr5 165620863 165621433 -37464099 + Tigger3b DNA MER2_type 356 965 -2064 2372 100 10 6 chr5 165621433 165621744 -37463788 - AluSq SINE Alu -1 312 1 4808 111 58 25 chr5 165621744 165622022 -37463510 + Tigger3b DNA MER2_type 965 1232 0 232 170 21 0 chr5 165622773 165622820 -37462712 + C-rich Low_complexity Low_complexity 2 49 0 683 327 12 24 chr5 165623214 165623468 -37462064 - MIR SINE MIR -10 252 2 2542 155 48 4 chr5 165623693 165624151 -37461381 - L1PA16 LINE L1 -5 6161 5684 269 262 109 49 chr5 165624615 165624798 -37460734 - MIR3 SINE MIR -11 197 4 464 296 136 15 chr5 165624946 165625145 -37460387 + MIR SINE MIR 34 256 -6 201 235 0 59 chr5 165625991 165626042 -37459490 - L2 LINE L2 0 3272 3225 1849 160 19 25 chr5 165626124 165626492 -37459040 + MER47A DNA MER2_type 1 366 0 1403 166 38 10 chr5 165626566 165626880 -37458652 - MER33 DNA MER1_type 0 324 2 272 280 80 40 chr5 165627212 165627337 -37458195 - MIR SINE MIR -56 206 77 2067 142 3 0 chr5 165627356 165627652 -37457880 + AluSx SINE Alu 14 310 -2 445 301 142 23 chr5 165627938 165628157 -37457375 - L3 LINE CR1 -26 1551 1307 2022 133 7 0 chr5 165628293 165628578 -37456954 + AluSx SINE Alu 1 287 -25 222 128 0 26 chr5 165629289 165629328 -37456204 - L2 LINE L2 -12 3260 3223 311 280 107 27 chr5 165629355 165629505 -37456027 + MIR SINE MIR 95 256 -6 250 367 67 0 chr5 165629851 165629971 -37455561 - L2 LINE L2 -6 3307 3180 3137 46 3 8 chr5 165630611 165631002 -37454530 + L1PA7 LINE L1 5766 6154 0 1901 125 23 0 chr5 165631539 165631842 -37453690 - L1PA12 LINE L1 0 6168 5859 22 0 0 0 chr5 165631901 165631923 -37453609 + AT_rich Low_complexity Low_complexity 1 22 0 2159 90 7 3 chr5 165631961 165632250 -37453282 + AluSp SINE Alu 1 290 -23 3005 11 0 0 chr5 165632782 165633133 -37452399 - L1HS LINE L1 -277 5878 5528 2465 7 0 0 chr5 165633132 165633422 -37452110 + L1HS LINE L1 5866 6155 0 * 380 305 127 15 chr5 165634006 165634344 -37451188 + L2 LINE L2 2763 3144 -169 768 78 0 18 chr5 165634356 165634613 -37450919 - AluY SINE Alu -2 309 1 248 367 51 19 chr5 165634621 165634779 -37450753 + L2 LINE L2 3150 3312 -1 1063 169 52 61 chr5 165634932 165635158 -37450374 + MER33 DNA MER1_type 1 219 -2366 2003 136 3 0 chr5 165635158 165635445 -37450087 + AluSx SINE Alu 1 288 -24 1063 169 52 61 chr5 165635445 165635458 -37450074 + MER33 DNA MER1_type 219 231 -2354 2334 89 0 0 chr5 165635458 165635749 -37449783 + AluSg SINE Alu 1 291 -19 1063 169 52 61 chr5 165635749 165635836 -37449696 + MER33 DNA MER1_type 231 316 -8 378 297 145 42 chr5 165636134 165636530 -37449002 + L2 LINE L2 2560 3002 -270 331 268 98 121 chr5 165636755 165636979 -37448553 - MIR SINE MIR -21 241 23 326 224 0 0 chr5 165636991 165637058 -37448474 - MIR SINE MIR -111 151 85 5613 177 68 25 chr5 165637223 165638479 -37447053 - L1MC3 LINE L1 -16 7769 6459 303 206 151 0 chr5 165638480 165638553 -37446979 + L2 LINE L2 3194 3277 -36 446 340 90 53 chr5 165639326 165639935 -37445597 + L2 LINE L2 2635 3269 -3 460 261 111 28 chr5 165640326 165640506 -37445026 - L2 LINE L2 -1 3312 3118 940 261 27 23 chr5 165642466 165642726 -37442806 + MIR SINE MIR 1 261 -1 734 367 47 12 chr5 165642874 165643193 -37442339 + L2 LINE L2 2943 3272 0 1807 113 4 0 chr5 165643355 165643629 -37441903 - L1MA4A LINE L1 -15 6288 6014 263 213 0 16 chr5 165644507 165644568 -37440964 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 605 233 80 45 chr5 165645892 165646068 -37439464 + MER5A DNA MER1_type 8 189 0 196 373 76 31 chr5 165646108 165646333 -37439199 + L3 LINE CR1 1238 1472 -105 2442 71 3 3 chr5 165646749 165647046 -37438486 - AluSp SINE Alu -16 297 1 895 233 70 18 chr5 165647077 165647305 -37438227 - MIR SINE MIR -10 252 13 586 266 18 6 chr5 165647403 165647572 -37437960 - MIR SINE MIR 0 262 92 364 390 24 0 chr5 165648143 165648312 -37437220 + MIR SINE MIR 20 192 -70 589 183 0 32 chr5 165648556 165648682 -37436850 + L1PA15 LINE L1 6038 6159 -6 2445 65 3 3 chr5 165650106 165650415 -37435117 - AluY SINE Alu -2 309 1 1045 98 0 0 chr5 165650415 165650547 -37434985 - AluY SINE Alu -176 135 4 23 54 0 0 chr5 165650676 165650713 -37434819 + AT_rich Low_complexity Low_complexity 1 37 0 282 274 105 32 chr5 165651339 165651463 -37434069 - L2 LINE L2 -8 3264 3132 265 287 79 10 chr5 165651468 165651569 -37433963 + MIR SINE MIR 81 188 -74 510 83 0 0 chr5 165652665 165652737 -37432795 + (TCCA)n Simple_repeat Simple_repeat 2 73 0 31 44 0 0 chr5 165652763 165652808 -37432724 + AT_rich Low_complexity Low_complexity 1 45 0 419 323 97 22 chr5 165653048 165653274 -37432258 + L1MC/D LINE L1 5552 5794 -2014 234 0 0 0 chr5 165653448 165653474 -37432058 + (A)n Simple_repeat Simple_repeat 1 26 0 180 237 151 43 chr5 165653666 165653759 -37431773 - MIR SINE MIR -64 144 42 264 292 62 53 chr5 165653984 165654227 -37431305 + L1ME4a LINE L1 5551 5795 -326 216 0 0 0 chr5 165654345 165654369 -37431163 + (CA)n Simple_repeat Simple_repeat 2 25 0 294 208 72 56 chr5 165654371 165654496 -37431036 + L1ME4a LINE L1 5971 6097 -24 301 361 8 16 chr5 165654574 165654696 -37430836 + L2 LINE L2 3188 3308 -5 684 245 217 0 chr5 165655036 165655220 -37430312 + MER58A DNA MER1_type 1 224 0 300 322 91 16 chr5 165655364 165655485 -37430047 + MIR SINE MIR 18 147 -115 269 325 38 0 chr5 165655493 165655573 -37429959 - L2 LINE L2 -2 3270 3188 217 227 17 25 chr5 165655638 165655757 -37429775 + (CATA)n Simple_repeat Simple_repeat 3 120 0 303 236 63 71 chr5 165656569 165656696 -37428836 - MIR3 SINE MIR -47 161 36 328 255 124 81 chr5 165657518 165657679 -37427853 - MIR3 SINE MIR -11 197 30 391 317 87 22 chr5 165657879 165658109 -37427423 + MIR SINE MIR 18 262 0 225 330 37 9 chr5 165658165 165658274 -37427258 - MIR SINE MIR -94 168 57 551 269 57 0 chr5 165658360 165658572 -37426960 + L1MC4a LINE L1 5671 5894 -1914 1306 188 60 80 chr5 165659259 165659657 -37425875 + MLT1B LTR MaLR 1 390 0 413 275 36 100 chr5 165660770 165661021 -37424511 + MIR SINE MIR 8 242 -20 413 320 41 55 chr5 165661724 165661943 -37423589 - L3 LINE CR1 -50 1527 1312 998 291 137 35 chr5 165661963 165662568 -37422964 + L2 LINE L2 2185 2851 -463 1095 118 7 0 chr5 165662660 165662813 -37422719 - AluSc SINE Alu -21 288 135 667 302 107 27 chr5 165662923 165663297 -37422235 + L2 LINE L2 2830 3233 -80 309 327 60 7 chr5 165663503 165663653 -37421879 - MIR SINE MIR 0 262 105 473 284 92 39 chr5 165664085 165664314 -37421218 + MIR SINE MIR 12 252 -10 214 162 0 0 chr5 165664421 165664458 -37421074 + GA-rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 165666003 165666024 -37419508 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr5 165667761 165667790 -37417742 + (CTG)n Simple_repeat Simple_repeat 3 31 0 414 0 0 0 chr5 165669210 165669256 -37416276 + (TG)n Simple_repeat Simple_repeat 1 46 0 241 302 0 23 chr5 165670149 165670235 -37415297 + L2 LINE L2 2875 2958 -314 201 24 71 24 chr5 165670418 165670460 -37415072 + T-rich Low_complexity Low_complexity 2 45 0 1804 143 14 4 chr5 165670462 165670742 -37414790 - AluSx SINE Alu -29 283 1 2210 93 38 0 chr5 165671029 165671320 -37414212 + AluY SINE Alu 1 302 -9 228 324 59 0 chr5 165671321 165671389 -37414143 - L2 LINE L2 -50 3263 3192 489 284 27 38 chr5 165671447 165671630 -37413902 + MIR SINE MIR 26 206 -56 208 290 56 65 chr5 165671686 165671793 -37413739 - L2 LINE L2 -9 3304 3199 567 289 67 10 chr5 165672146 165672354 -37413178 + MIR SINE MIR 29 248 -14 639 212 27 95 chr5 165672955 165673177 -37412355 - MER63A DNA MER1_type 0 210 4 404 303 69 9 chr5 165673899 165674117 -37411415 + L1ME LINE L1 5575 5805 -316 638 242 181 5 chr5 165674134 165674349 -37411183 - MIR SINE MIR 0 262 10 3545 153 14 33 chr5 165674503 165675087 -37410445 + L1MB7 LINE L1 5496 6066 -118 2294 77 0 10 chr5 165675087 165675426 -37410106 + AluY SINE Alu 1 311 0 3545 153 14 33 chr5 165675426 165675536 -37409996 + L1MB7 LINE L1 6066 6177 -7 25 83 0 0 chr5 165675825 165675885 -37409647 + AT_rich Low_complexity Low_complexity 1 60 0 845 162 89 70 chr5 165676018 165676332 -37409200 - MER33 DNA MER1_type 0 324 5 890 277 207 28 chr5 165677013 165678148 -37407384 + L2 LINE L2 1968 3312 -1 987 260 70 72 chr5 165678377 165678825 -37406707 + MER77 LTR ERV1 178 599 -6 429 268 73 12 chr5 165678886 165679050 -37406482 - MIR3 SINE MIR -1 207 34 558 297 206 5 chr5 165680198 165680407 -37405125 + MIR SINE MIR 9 259 -3 220 182 0 106 chr5 165680608 165680674 -37404858 - L2 LINE L2 -4 3309 3251 648 242 38 0 chr5 165680847 165681004 -37404528 - MER45A DNA AcHobo 0 178 16 225 391 9 9 chr5 165681090 165681200 -37404332 + L2 LINE L2 2924 3033 -239 366 254 70 0 chr5 165681770 165681884 -37403648 - MER103 DNA DNA -33 133 12 195 317 135 73 chr5 165681972 165682221 -37403311 + L2 LINE L2 2800 3061 -211 1914 127 29 0 chr5 165682569 165682693 -37402839 + AluSx SINE Alu 1 120 -187 1649 77 4 8 chr5 165682693 165682927 -37402605 + L1PA8 LINE L1 5940 6172 0 1914 127 29 0 chr5 165682927 165683101 -37402431 + AluSx SINE Alu 120 307 0 287 357 81 54 chr5 165683101 165683467 -37402065 + L2 LINE L2 2545 2925 -347 2019 158 0 0 chr5 165683467 165683770 -37401762 - AluJb SINE Alu -9 303 1 287 357 81 54 chr5 165683770 165683844 -37401688 + L2 LINE L2 2925 2996 -276 231 376 112 0 chr5 165683904 165684029 -37401503 + L2 LINE L2 3134 3272 0 282 321 131 46 chr5 165684110 165684521 -37401011 + L2 LINE L2 2836 3281 -32 309 294 141 21 chr5 165685245 165685447 -37400085 - MIR SINE MIR -3 259 37 678 333 42 51 chr5 165686465 165686936 -37398596 + HAL1 LINE L1 684 1150 -1357 2208 106 17 0 chr5 165686938 165687239 -37398293 + AluSq SINE Alu 1 306 -7 1046 39 0 0 chr5 165687241 165687371 -37398161 - L1PA3 LINE L1 -1286 4860 4731 7705 22 1 0 chr5 165687371 165688668 -37396864 + L1PA3 LINE L1 4858 6155 0 661 259 107 37 chr5 165688668 165689097 -37396435 + HAL1 LINE L1 1142 1600 -907 669 131 23 8 chr5 165689510 165689640 -37395892 + CT-rich Low_complexity Low_complexity 3 134 0 2901 88 31 31 chr5 165689651 165690104 -37395428 - L1PA10 LINE L1 -6 6162 5710 1753 148 21 24 chr5 165690253 165690544 -37394988 + AluJo SINE Alu 10 299 -13 443 356 122 12 chr5 165690646 165691100 -37394432 - L2 LINE L2 -66 3206 2703 349 241 25 0 chr5 165691499 165691578 -37393954 - MIR SINE MIR -21 241 161 206 341 128 34 chr5 165691619 165691798 -37393734 + L2 LINE L2 2625 2820 -494 1768 197 124 17 chr5 165691898 165692365 -37393167 + Charlie1b DNA MER1_type 7 523 0 219 69 0 0 chr5 165692368 165692397 -37393135 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1887 189 0 6 chr5 165692412 165692724 -37392808 - AluJb SINE Alu -2 310 1 433 283 162 30 chr5 165692740 165692938 -37392594 + MIR SINE MIR 12 235 -27 1477 203 66 11 chr5 165693896 165694332 -37391200 + L1ME LINE L1 5203 5670 -496 280 235 29 0 chr5 165694339 165694407 -37391125 + L1ME1 LINE L1 5628 5697 -469 627 166 0 106 chr5 165694430 165694581 -37390951 - AluJo SINE Alu -177 135 1 1179 229 57 0 chr5 165694582 165694897 -37390635 + L1ME1 LINE L1 5690 6022 -144 322 169 56 14 chr5 165694901 165694926 -37390606 + MER3 DNA MER1_type 19 46 -163 326 151 0 81 chr5 165694926 165695012 -37390520 - MER3 DNA MER1_type 0 209 131 1315 196 7 81 chr5 165695022 165695333 -37390199 + MER3 DNA MER1_type 2247 2579 -45 2364 64 3 0 chr5 165695333 165695648 -37389884 - AluSp SINE Alu 0 316 1 388 104 0 78 chr5 165695654 165695731 -37389801 - L1MA5 LINE L1 0 6300 6230 1315 196 7 81 chr5 165695731 165695818 -37389714 + MER3 DNA MER1_type 2584 2624 0 327 223 12 0 chr5 165695818 165695904 -37389628 + L1ME1 LINE L1 6045 6130 -34 620 255 93 0 chr5 165697124 165697285 -37388247 + MER119 DNA MER1_type 1 176 -407 1042 193 55 22 chr5 165697356 165697630 -37387902 + MER119 DNA MER1_type 292 574 -9 317 306 41 8 chr5 165697638 165697759 -37387773 - MIR SINE MIR -90 172 48 308 159 0 16 chr5 165697783 165697846 -37387686 + CT-rich Low_complexity Low_complexity 1 62 0 828 139 8 0 chr5 165697850 165697979 -37387553 - AluJb SINE Alu -34 278 149 490 295 12 29 chr5 165699379 165699552 -37385980 + MER96 DNA MER1_type? 1 170 -5 640 224 7 7 chr5 165699557 165699700 -37385832 + MIR SINE MIR 110 252 -10 380 334 98 60 chr5 165699818 165700111 -37385421 + L2 LINE L2 2766 3083 -189 2103 145 0 0 chr5 165700111 165700408 -37385124 - AluSg SINE Alu -13 297 1 380 334 98 60 chr5 165700408 165700604 -37384928 + L2 LINE L2 3083 3270 -2 223 280 56 47 chr5 165700636 165700743 -37384789 - L3 LINE CR1 -128 1449 1342 306 303 42 124 chr5 165700798 165700982 -37384550 - L2 LINE L2 -1 3271 3128 2221 105 3 7 chr5 165700982 165701288 -37384244 + AluSx SINE Alu 1 305 -7 306 303 42 124 chr5 165701288 165701459 -37384073 - L2 LINE L2 -144 3128 2945 2315 82 30 13 chr5 165701528 165701833 -37383699 - AluSg SINE Alu 0 310 1 795 308 32 51 chr5 165704034 165704446 -37381086 + L2 LINE L2 2464 2867 -447 273 57 0 0 chr5 165704476 165704511 -37381021 + (CA)n Simple_repeat Simple_repeat 2 36 0 275 383 0 0 chr5 165705473 165705567 -37379965 + L2 LINE L2 3179 3272 0 402 277 82 22 chr5 165705898 165706082 -37379450 + MIR SINE MIR 64 258 -4 227 250 25 50 chr5 165706274 165706354 -37379178 + L2 LINE L2 3223 3300 -13 292 265 65 22 chr5 165706537 165706642 -37378890 - MIR SINE MIR -65 143 35 305 282 42 63 chr5 165707543 165707685 -37377847 + L2 LINE L2 2727 2865 -449 335 319 26 0 chr5 165707943 165708056 -37377476 + L2 LINE L2 3183 3298 -15 472 324 50 0 chr5 165708091 165708230 -37377302 - MIR SINE MIR -116 146 1 421 263 67 41 chr5 165708966 165709160 -37376372 + MIR SINE MIR 64 262 0 236 241 19 0 chr5 165709372 165709426 -37376106 + L2 LINE L2 3208 3262 -10 368 214 218 97 chr5 165710917 165711123 -37374409 - MIR SINE MIR -31 231 1 216 279 16 0 chr5 165711153 165711214 -37374318 + L2 LINE L2 3211 3272 0 447 259 116 14 chr5 165711669 165711885 -37373647 + MLT1L LTR MaLR 30 267 -348 258 230 51 96 chr5 165712035 165712213 -37373319 + MLT1K LTR MaLR 407 576 -12 4444 82 8 11 chr5 165712647 165713271 -37372261 + L1PA13 LINE L1 5539 6160 -3 741 250 11 6 chr5 165713606 165713782 -37371750 + MER45A DNA AcHobo 2 178 0 1269 26 0 0 chr5 165713837 165713993 -37371539 - L1PA7 LINE L1 -266 5888 5733 * 1872 244 98 27 chr5 165713988 165715356 -37370176 - L1M4c LINE L1 -4338 2487 915 227 79 26 0 chr5 165715404 165715442 -37370090 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 903 110 24 0 chr5 165715444 165715571 -37369961 - AluY SINE Alu -30 281 152 281 238 0 36 chr5 165715613 165715697 -37369835 - L1M4c LINE L1 -5662 880 800 293 221 58 39 chr5 165716182 165716286 -37369246 - L1M4c LINE L1 -6391 151 46 393 248 112 0 chr5 165716635 165716760 -37368772 - MER117 DNA MER1_type -53 144 6 2230 91 3 29 chr5 165716762 165717071 -37368461 - AluSg SINE Alu -9 301 1 2127 264 58 88 chr5 165717183 165718419 -37367113 + L2 LINE L2 2124 3313 0 300 280 9 0 chr5 165718579 165718686 -37366846 - MER103 DNA DNA -20 146 39 501 283 204 0 chr5 165718763 165718954 -37366578 + MIR SINE MIR 13 242 -20 716 318 65 36 chr5 165718982 165719394 -37366138 - L2 LINE L2 -25 3288 2865 2160 90 45 61 chr5 165721331 165721708 -37363824 + THE1C LTR MaLR 1 371 -4 6931 26 1 0 chr5 165722713 165723561 -37361971 - L1PA2 LINE L1 0 6155 5307 282 56 0 0 chr5 165723612 165723648 -37361884 + (A)n Simple_repeat Simple_repeat 1 36 0 232 290 112 37 chr5 165724031 165724138 -37361394 - L2 LINE L2 0 3313 3199 1806 203 9 3 chr5 165724143 165724492 -37361040 + MLT1A1 LTR MaLR 15 365 0 466 291 153 5 chr5 165724880 165725069 -37360463 + MIR SINE MIR 34 250 -12 222 330 156 9 chr5 165725775 165725884 -37359648 - L2 LINE L2 -12 3260 3136 396 282 45 82 chr5 165725911 165726052 -37359480 - MIR SINE MIR -14 248 116 2226 115 3 0 chr5 165726052 165726348 -37359184 + AluSx SINE Alu 1 297 -15 396 282 45 82 chr5 165726348 165726426 -37359106 - MIR SINE MIR -146 116 37 297 360 16 32 chr5 165726587 165726773 -37358759 - L2 LINE L2 -215 3057 2875 318 260 6 78 chr5 165727139 165727316 -37358216 - MER104 DNA Tc2 0 180 19 24 67 0 0 chr5 165727525 165727570 -37357962 + AT_rich Low_complexity Low_complexity 1 45 0 341 185 27 123 chr5 165727605 165727751 -37357781 + L1ME4a LINE L1 5922 6053 -68 1771 92 4 66 chr5 165727784 165728055 -37357477 - AluSx SINE Alu 0 312 59 1791 203 74 31 chr5 165730814 165731262 -37354270 - MLT1C LTR MaLR 0 467 1 295 184 176 1 chr5 165731275 165731402 -37354130 - HAL1b LINE L1 -8 6113 1205 365 293 69 43 chr5 165731468 165731700 -37353832 - L1ME LINE L1 -383 5738 5501 2353 92 0 0 chr5 165731835 165732129 -37353403 - AluY SINE Alu -17 294 1 309 310 97 70 chr5 165736226 165736555 -37348977 + MLT1K LTR MaLR 2 339 -249 944 252 4 35 chr5 165737428 165737682 -37347850 + MIR SINE MIR 17 262 0 272 245 93 79 chr5 165738106 165738245 -37347287 - MER5A DNA MER1_type -6 183 43 242 308 0 13 chr5 165738277 165738355 -37347177 - L2 LINE L2 -209 3063 2987 5793 115 55 18 chr5 165738403 165739486 -37346046 + L1MA3 LINE L1 5182 6305 0 407 315 20 14 chr5 165739669 165739815 -37345717 - MER5B DNA MER1_type -7 171 25 591 157 47 62 chr5 165740397 165740564 -37344968 - L1ME2 LINE L1 0 6334 6012 1967 110 23 10 chr5 165740564 165740864 -37344668 - L1PA10 LINE L1 0 6168 5865 2960 229 49 9 chr5 165790872 165791473 -37294059 + L1ME2 LINE L1 5336 5911 -423 586 135 21 0 chr5 165791473 165791569 -37293963 + L1MB5 LINE L1 6077 6174 0 2236 90 0 10 chr5 165791575 165791874 -37293658 + AluSc SINE Alu 1 296 -13 2960 229 49 9 chr5 165791874 165792068 -37293464 + L1ME2 LINE L1 5915 6332 -2 258 305 32 11 chr5 165792242 165792337 -37293195 + LTR33 LTR ERVL 88 184 -337 1730 273 80 18 chr5 165792977 165794170 -37291362 - L1ME3A LINE L1 -89 6475 5062 1598 206 56 24 chr5 165794170 165794548 -37290984 + MLT1B LTR MaLR 1 390 0 1730 273 80 18 chr5 165794548 165795016 -37290516 - L1ME3A LINE L1 -1502 5062 4625 21 0 0 0 chr5 165795084 165795105 -37290427 + AT_rich Low_complexity Low_complexity 1 21 0 693 211 0 8 chr5 165795352 165795480 -37290052 - FRAM SINE Alu -17 159 33 192 40 0 0 chr5 165795488 165795513 -37290019 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6751 72 9 0 chr5 165795513 165796988 -37288544 - L1PA7 LINE L1 -18 6136 4655 1358 312 69 13 chr5 165796990 165797633 -37287899 + L2 LINE L2 2616 3312 -1 360 0 0 0 chr5 165797678 165797718 -37287814 + (CA)n Simple_repeat Simple_repeat 2 41 0 1923 132 15 44 chr5 165797720 165798060 -37287472 - MER44D DNA MER2_type -3 606 7 22 0 0 0 chr5 165798159 165798181 -37287351 + AT_rich Low_complexity Low_complexity 1 22 0 234 244 126 16 chr5 165798195 165798322 -37287210 + L1MC4a LINE L1 5821 5961 -1847 489 181 155 90 chr5 165799254 165799409 -37286123 + L2 LINE L2 3140 3304 -9 276 303 54 50 chr5 165799413 165799730 -37285802 - HAL1 LINE L1 -749 1758 1441 1640 160 27 21 chr5 165799735 165800073 -37285459 - L1MD1 LINE L1 -6 6236 5897 705 247 29 4 chr5 165800090 165800298 -37285234 + MER89 LTR ERV1 42 353 -206 3419 210 52 13 chr5 165800298 165801395 -37284137 - L1MDa LINE L1 -3007 3533 2352 2645 46 0 0 chr5 165801395 165801698 -37283834 - AluY SINE Alu -8 303 1 3419 210 52 13 chr5 165801698 165802158 -37283374 - L1MDa LINE L1 -4188 2352 1911 5256 163 26 30 chr5 165802167 165803227 -37282305 - L1MA7 LINE L1 0 6291 5240 2406 103 0 0 chr5 165803227 165803537 -37281995 - AluSg SINE Alu 0 310 1 5256 163 26 30 chr5 165803537 165803789 -37281743 - L1MA7 LINE L1 -1051 5240 4988 1859 171 29 5 chr5 165803788 165804168 -37281364 + L1 LINE L1 3989 4377 -1769 * 1427 280 18 53 chr5 165804173 165804683 -37280849 + L1M2 LINE L1 18 509 -7056 * 15431 195 33 10 chr5 165804681 165809257 -37276275 + L1M2 LINE L1 2176 6882 -744 380 241 17 9 chr5 165809412 165809528 -37276004 + L1MA6 LINE L1 6180 6296 -4 2745 176 28 9 chr5 165809546 165810115 -37275417 + L1 LINE L1 4358 4937 -1209 579 174 99 0 chr5 165810114 165810235 -37275297 - L1MDa LINE L1 -4620 1920 1788 * 1333 227 62 71 chr5 165810236 165810642 -37274890 - L1MDa LINE L1 -5724 816 415 2097 136 0 0 chr5 165810739 165811034 -37274498 - AluSx SINE Alu -5 307 13 2021 142 3 0 chr5 165811057 165811345 -37274187 - AluSx SINE Alu -23 289 1 258 311 60 38 chr5 165811361 165811522 -37274010 + MIR SINE MIR 16 184 -24 238 229 111 0 chr5 165812067 165812153 -37273379 - MIR SINE MIR -87 121 27 1026 249 83 17 chr5 165812164 165812465 -37273067 - LTR16C LTR ERVL -6 485 165 491 382 13 7 chr5 165812577 165812729 -37272803 - L2 LINE L2 -18 3254 3102 288 339 242 10 chr5 165812862 165813151 -37272381 + L2 LINE L2 2917 3272 0 258 254 14 14 chr5 165814765 165814836 -37270696 + MIR SINE MIR 76 146 -116 490 241 27 9 chr5 165815378 165815490 -37270042 + MER5A DNA MER1_type 73 186 -3 219 273 30 50 chr5 165815402 165815501 -37270031 - MER5A DNA MER1_type -85 104 8 * 807 64 0 0 chr5 165816811 165816921 -37268611 + AluY SINE Alu 197 306 -5 367 347 34 11 chr5 165816993 165817169 -37268363 - L2 LINE L2 0 3313 3134 722 276 6 17 chr5 165817275 165817449 -37268083 - MER5B DNA MER1_type -6 172 1 687 275 12 12 chr5 165817772 165817939 -37267593 - MER5A DNA MER1_type -5 184 18 303 328 59 8 chr5 165818252 165818371 -37267161 - MIR SINE MIR -3 259 135 264 83 0 0 chr5 165818971 165819007 -37266525 - L1PB1 LINE L1 -270 5881 5846 1786 88 15 4 chr5 165819007 165819269 -37266263 + L1PB1 LINE L1 5886 6150 -1 324 70 0 0 chr5 165819350 165819393 -37266139 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 323 127 9 chr5 165819538 165819767 -37265765 - MIR SINE MIR 0 262 7 208 173 25 123 chr5 165819786 165819867 -37265665 + MER5A DNA MER1_type 117 189 0 464 194 254 8 chr5 165819873 165820007 -37265525 - MER5A DNA MER1_type -14 175 9 2281 119 0 0 chr5 165820378 165820680 -37264852 - AluSg SINE Alu -8 302 1 1898 175 19 25 chr5 165821269 165821635 -37263897 - MLT1A1 LTR MaLR 0 365 2 270 346 29 27 chr5 165821778 165821926 -37263606 - MER5B DNA MER1_type -2 187 35 567 335 28 0 chr5 165822239 165822418 -37263114 + MER91B DNA MER1_type 6 189 -1 568 327 40 24 chr5 165823102 165823353 -37262179 - MIR SINE MIR -6 256 2 776 226 16 42 chr5 165823390 165823580 -37261952 - MIR SINE MIR -26 236 52 255 233 222 22 chr5 165823894 165823984 -37261548 - L2 LINE L2 -20 3252 3145 262 248 101 64 chr5 165824039 165824148 -37261384 + L2 LINE L2 3201 3313 0 319 279 173 17 chr5 165824441 165824620 -37260912 - L2 LINE L2 -399 2915 2709 1992 75 12 0 chr5 165824904 165825156 -37260376 - AluSg SINE Alu -22 288 34 522 321 68 18 chr5 165825860 165826208 -37259324 - L1ME LINE L1 -414 5707 5342 2070 100 0 0 chr5 165826978 165827239 -37258293 + AluSg SINE Alu 1 261 -49 23 0 0 0 chr5 165827239 165827262 -37258270 + AT_rich Low_complexity Low_complexity 1 23 0 349 203 14 14 chr5 165827381 165827455 -37258077 - MIR SINE MIR -107 101 28 260 299 56 19 chr5 165827496 165827603 -37257929 - MIR SINE MIR -60 148 38 370 271 85 23 chr5 165828275 165828404 -37257128 - MIR SINE MIR -105 157 21 321 222 82 22 chr5 165828903 165829038 -37256494 - MER103 DNA DNA -8 158 16 2370 98 0 0 chr5 165829119 165829426 -37256106 - AluY SINE Alu -4 307 1 518 298 28 0 chr5 165829472 165829613 -37255919 + MIR3 SINE MIR 51 195 -13 320 257 40 14 chr5 165829698 165829772 -37255760 - MIR SINE MIR -82 126 51 21 0 0 0 chr5 165829847 165829868 -37255664 + AT_rich Low_complexity Low_complexity 1 21 0 287 282 0 13 chr5 165830039 165830117 -37255415 + MIR SINE MIR 80 156 -106 506 325 61 4 chr5 165830389 165830617 -37254915 + MIR SINE MIR 2 242 -20 293 311 100 48 chr5 165831089 165831340 -37254192 + L2 LINE L2 3037 3300 -13 228 320 0 20 chr5 165831401 165831501 -37254031 - MIR SINE MIR -25 237 140 384 312 133 12 chr5 165831583 165831756 -37253776 - MIR SINE MIR -67 195 2 813 241 76 34 chr5 165831942 165832178 -37253354 - MIR SINE MIR -5 257 12 188 309 99 37 chr5 165832943 165833024 -37252508 - L2 LINE L2 -9 3263 3178 2008 223 138 0 chr5 165833060 165833653 -37251879 + MER63C DNA MER1_type 256 930 0 759 314 101 58 chr5 165833656 165834626 -37250906 - L2 LINE L2 -86 3186 2177 755 284 41 4 chr5 165834635 165834878 -37250654 - MIR SINE MIR -3 259 8 1960 138 20 7 chr5 165834920 165835225 -37250307 + AluSx SINE Alu 1 309 -3 315 243 105 26 chr5 165835429 165835581 -37249951 - L1ME4a LINE L1 -1 6120 5957 416 233 62 0 chr5 165835654 165835783 -37249749 + MER104 DNA Tc2 44 180 0 737 272 94 0 chr5 165836045 165836343 -37249189 - L1ME4a LINE L1 -1989 5819 5494 2780 184 39 13 chr5 165836451 165837069 -37248463 - L1MD3 LINE L1 -13 7982 7349 2302 114 0 0 chr5 165837074 165837380 -37248152 + AluSx SINE Alu 1 306 -6 301 184 138 0 chr5 165837387 165837474 -37248058 - L1ME4a LINE L1 -2368 5440 5342 727 316 17 4 chr5 165838896 165839133 -37246399 - MIR SINE MIR -21 241 2 188 340 206 0 chr5 165839178 165839275 -37246257 + L2 LINE L2 3137 3253 -19 2213 94 3 3 chr5 165839336 165839633 -37245899 - AluY SINE Alu -14 297 1 3946 207 58 22 chr5 165839662 165840753 -37244779 - L1MB2 LINE L1 -1 6170 5120 396 0 0 0 chr5 165840753 165840797 -37244735 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1987 131 3 0 chr5 165840799 165841081 -37244451 - AluSx SINE Alu -29 283 1 3946 207 58 22 chr5 165841081 165841459 -37244073 - L1MB2 LINE L1 -1051 5120 4653 438 258 0 131 chr5 165841592 165841790 -37243742 + L2 LINE L2 2363 2534 -780 4728 71 87 0 chr5 165842101 165842734 -37242798 + LTR12 LTR ERV1 1 688 0 21374 97 17 6 chr5 165842734 165845841 -37239691 + HERV9 LTR ERV1 1 3139 -5260 5999 92 12 8 chr5 165845848 165846710 -37238822 + HERV9 LTR ERV1 4080 4944 -3455 2136 175 119 67 chr5 165846711 165847567 -37237965 + Harlequin LTR ERV1 840 1740 -5156 * 4821 92 7 76 chr5 165847565 165848396 -37237136 + Harlequin LTR ERV1 7626 8399 0 4887 68 46 24 chr5 165848396 165849069 -37236463 + LTR12 LTR ERV1 1 688 0 28 61 0 0 chr5 165849462 165849511 -37236021 + AT_rich Low_complexity Low_complexity 1 49 0 254 349 110 41 chr5 165849560 165849778 -37235754 + L2 LINE L2 2828 3060 -212 402 21 0 0 chr5 165850959 165851006 -37234526 + (CA)n Simple_repeat Simple_repeat 2 48 0 865 275 157 31 chr5 165851304 165851342 -37234190 + L2 LINE L2 2433 2465 -848 3410 122 6 35 chr5 165851342 165851881 -37233651 - MER1A DNA MER1_type -1 526 4 865 275 157 31 chr5 165851881 165852494 -37233038 + L2 LINE L2 2465 3156 -157 414 114 23 23 chr5 165852548 165852636 -37232896 + Tigger4(Zombi) DNA MER2_type 2511 2598 -133 11221 30 0 1 chr5 165852636 165854053 -37231479 - L1PA2 LINE L1 -1946 4200 2785 10094 22 2 1 chr5 165854053 165856004 -37229528 + L1PA2 LINE L1 4203 6154 -1 793 106 35 7 chr5 165856013 165856154 -37229378 + Tigger4(Zombi) DNA MER2_type 2587 2731 0 628 219 36 7 chr5 165856168 165856305 -37229227 + L2 LINE L2 3171 3311 -2 252 401 36 30 chr5 165856525 165856692 -37228840 + L2 LINE L2 2934 3101 -171 211 275 43 0 chr5 165856771 165856840 -37228692 + MIR SINE MIR 83 154 -108 234 62 0 0 chr5 165856855 165856887 -37228645 + (TATAA)n Simple_repeat Simple_repeat 3 34 0 1264 201 42 23 chr5 165857192 165857451 -37228081 + AluJo SINE Alu 30 293 -19 244 395 36 36 chr5 165857738 165857905 -37227627 - L2 LINE L2 -181 3091 2925 558 349 141 33 chr5 165857978 165858853 -37226679 - L2 LINE L2 -448 2866 1898 375 121 0 0 chr5 165859128 165859186 -37226346 + (CA)n Simple_repeat Simple_repeat 2 59 0 663 292 97 9 chr5 165859274 165859490 -37226042 + L3 LINE CR1 1252 1486 -91 25 0 0 0 chr5 165859562 165859587 -37225945 + AT_rich Low_complexity Low_complexity 1 25 0 191 221 47 93 chr5 165859885 165859971 -37225561 - L2 LINE L2 -12 3260 3179 188 81 81 0 chr5 165860673 165860710 -37224822 + T-rich Low_complexity Low_complexity 2 41 0 718 338 19 6 chr5 165861015 165861335 -37224197 + LTR16B LTR ERVL 140 463 -1 26 30 0 0 chr5 165861397 165861430 -37224102 + AT_rich Low_complexity Low_complexity 1 33 0 3331 272 95 29 chr5 165862145 165863369 -37222163 + L1ME1 LINE L1 36 1178 -5037 1807 147 10 20 chr5 165863369 165863662 -37221870 + AluSc SINE Alu 1 290 -19 3331 272 95 29 chr5 165863662 165864739 -37220793 + L1ME1 LINE L1 1178 2183 -4032 2750 191 31 20 chr5 165864739 165865247 -37220285 + MLT2B3 LTR ERVL 3 519 -35 450 0 0 0 chr5 165865247 165865297 -37220235 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 2750 191 31 20 chr5 165865297 165865334 -37220198 + MLT2B3 LTR ERVL 519 554 0 3331 272 95 29 chr5 165865334 165866565 -37218967 + L1ME1 LINE L1 2183 3764 -2451 2823 195 43 62 chr5 165866574 165867711 -37217821 + L1ME1 LINE L1 5119 6230 -5 317 278 8 16 chr5 165867821 165867947 -37217585 - L1MEc LINE L1 -5039 1357 1233 2563 160 2 1 chr5 165867999 165868678 -37216854 + L1P5 LINE L1 4789 5468 -683 4047 108 3 17 chr5 165868703 165869353 -37216179 - L1PB1 LINE L1 -37 6114 5474 22 0 0 0 chr5 165869395 165869417 -37216115 + AT_rich Low_complexity Low_complexity 1 22 0 254 314 23 0 chr5 165869506 165869592 -37215940 + L2 LINE L2 2134 2221 -1093 369 326 7 22 chr5 165869675 165869810 -37215722 + L2 LINE L2 3176 3308 -5 1146 330 61 23 chr5 165870034 165870709 -37214823 + L2 LINE L2 2493 3201 -112 249 373 0 0 chr5 165871015 165871141 -37214391 - MIR SINE MIR -65 197 72 1688 114 201 38 chr5 165871389 165871757 -37213775 - MSTA LTR MaLR 0 428 1 5454 82 5 4 chr5 165872307 165873049 -37212483 - L1PA11 LINE L1 -8 6166 5424 564 225 147 28 chr5 165873205 165873423 -37212109 - MIR SINE MIR -6 256 13 291 212 0 0 chr5 165873721 165873806 -37211726 + (TA)n Simple_repeat Simple_repeat 1 85 0 369 266 124 9 chr5 165874148 165874261 -37211271 + L2 LINE L2 3147 3272 0 500 295 106 5 chr5 165874443 165874650 -37210882 - L2 LINE L2 -4 3309 3082 597 273 88 9 chr5 165874925 165875141 -37210391 - MIR SINE MIR -1 261 29 619 297 103 35 chr5 165875321 165875718 -37209814 + L2 LINE L2 2890 3313 0 460 269 42 8 chr5 165876073 165876192 -37209340 + L2 LINE L2 3182 3304 -9 287 254 0 0 chr5 165876258 165876325 -37209207 - MIR SINE MIR -10 252 186 23 33 0 0 chr5 165876529 165876559 -37208973 + AT_rich Low_complexity Low_complexity 1 30 0 213 298 93 37 chr5 165877383 165877544 -37207988 + MIR3 SINE MIR 36 205 -3 206 338 14 0 chr5 165877930 165878001 -37207531 + MER5A DNA MER1_type 45 116 -73 4681 29 5 2 chr5 165878128 165878684 -37206848 + LTR6B LTR ERV1 1 558 0 1211 247 160 2 chr5 165878887 165879300 -37206232 - L2 LINE L2 0 3313 2836 1678 179 76 19 chr5 165879528 165879897 -37205635 + MLT1B LTR MaLR 1 390 0 464 242 65 20 chr5 165879953 165880106 -37205426 - MIR SINE MIR -14 248 89 813 259 36 14 chr5 165880180 165880400 -37205132 + MIR SINE MIR 22 246 -16 325 340 173 5 chr5 165880534 165880731 -37204801 + L3 LINE CR1 1348 1577 0 1984 171 12 0 chr5 165881522 165881866 -37203666 + MER7A DNA MER2_type 1 346 0 571 372 51 35 chr5 165881868 165882476 -37203056 + L2 LINE L2 2642 3260 -12 183 80 0 0 chr5 165882487 165882512 -37203020 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 1708 123 25 7 chr5 165883458 165883743 -37201789 + L1MA5A LINE L1 6005 6294 -3 335 366 12 0 chr5 165883820 165883984 -37201548 - MIR SINE MIR 0 262 97 412 286 112 37 chr5 165884265 165884426 -37201106 - MER5B DNA MER1_type -5 173 1 186 405 71 24 chr5 165884426 165884546 -37200986 + L2 LINE L2 3116 3241 -31 755 291 52 36 chr5 165884546 165884797 -37200735 + MIR SINE MIR 2 256 -6 207 314 136 17 chr5 165884952 165885070 -37200462 - MIR SINE MIR -105 157 26 705 242 6 133 chr5 165885125 165885400 -37200132 - L2 LINE L2 -5 3308 3080 216 0 0 0 chr5 165885400 165885424 -37200108 + (TG)n Simple_repeat Simple_repeat 1 24 0 705 242 6 133 chr5 165885424 165885478 -37200054 - L2 LINE L2 -233 3080 3021 2327 289 109 13 chr5 165885482 165886453 -37199079 - L2 LINE L2 -746 2568 1505 219 245 57 0 chr5 165886519 165886572 -37198960 - MIR SINE MIR -75 187 132 695 237 64 0 chr5 165886816 165886972 -37198560 + MIR SINE MIR 23 188 -74 205 244 0 0 chr5 165886972 165887017 -37198515 + (CA)n Simple_repeat Simple_repeat 1 45 0 23 0 0 0 chr5 165887069 165887092 -37198440 + AT_rich Low_complexity Low_complexity 1 23 0 298 321 36 55 chr5 165887275 165887440 -37198092 - L2 LINE L2 -2 3270 3109 631 299 83 14 chr5 165887468 165887685 -37197847 + MIR SINE MIR 2 233 -29 1383 92 0 0 chr5 165888053 165888227 -37197305 - AluSg/x SINE Alu -3 309 136 426 299 155 46 chr5 165888609 165889145 -37196387 - L2 LINE L2 -2 3270 2671 218 307 27 0 chr5 165889256 165889331 -37196201 + MIR SINE MIR 186 262 0 402 307 30 22 chr5 165889370 165889508 -37196024 - MIR SINE MIR -61 147 41 213 232 0 14 chr5 165889513 165889582 -37195950 + A-rich Low_complexity Low_complexity 2 69 0 243 0 0 0 chr5 165889843 165889870 -37195662 + (CA)n Simple_repeat Simple_repeat 2 28 0 23 33 0 0 chr5 165892046 165892076 -37193456 + AT_rich Low_complexity Low_complexity 1 30 0 243 133 0 0 chr5 165892965 165893010 -37192522 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr5 165893289 165893310 -37192222 + AT_rich Low_complexity Low_complexity 1 21 0 408 357 33 40 chr5 165893731 165893974 -37191558 + MIR SINE MIR 1 245 -17 699 255 40 51 chr5 165894022 165894278 -37191254 + MIR SINE MIR 6 262 0 293 284 62 0 chr5 165894381 165894462 -37191070 + L2 LINE L2 3187 3272 0 232 259 59 24 chr5 165895172 165895257 -37190275 + MER5B DNA MER1_type 23 110 -68 252 372 41 16 chr5 165896407 165896528 -37189004 + L2 LINE L2 2989 3112 -160 394 270 40 0 chr5 165896541 165896641 -37188891 - L2 LINE L2 -1 3312 3209 1621 188 6 19 chr5 165896641 165896955 -37188577 + AluJb SINE Alu 1 310 -2 256 207 12 98 chr5 165896992 165897074 -37188458 + MIR SINE MIR 142 216 -46 210 143 0 0 chr5 165897216 165897251 -37188281 + (AATTG)n Simple_repeat Simple_repeat 3 37 0 800 262 98 18 chr5 165897374 165897660 -37187872 - L2 LINE L2 0 3313 3005 217 309 31 62 chr5 165897779 165897876 -37187656 + L2 LINE L2 3171 3264 -49 207 0 0 0 chr5 165898247 165898270 -37187262 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1700 157 100 16 chr5 165898322 165898641 -37186891 + MER7A DNA MER2_type 1 344 -2 426 310 91 0 chr5 165898703 165898890 -37186642 - MIR SINE MIR -13 249 46 297 0 0 0 chr5 165899252 165899285 -37186247 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 512 184 0 9 chr5 165899285 165899394 -37186138 + GA-rich Low_complexity Low_complexity 2 109 0 22 35 0 0 chr5 165899410 165899439 -37186093 + AT_rich Low_complexity Low_complexity 1 29 0 300 286 7 64 chr5 165899477 165899617 -37185915 - L2 LINE L2 -198 3074 2943 833 182 17 89 chr5 165900413 165900649 -37184883 - MER20 DNA MER1_type 0 219 1 443 318 31 97 chr5 165901141 165901943 -37183589 - L2 LINE L2 0 3272 2443 359 274 126 51 chr5 165902010 165902225 -37183307 - MIR SINE MIR -14 248 18 201 343 119 45 chr5 165902277 165902478 -37183054 + MIR SINE MIR 43 258 -4 * 831 213 96 38 chr5 165902440 165902679 -37182853 - MIR SINE MIR 0 262 10 2341 150 66 4 chr5 165903211 165903678 -37181854 - L1MA8 LINE L1 0 6291 5796 25 0 0 0 chr5 165904240 165904265 -37181267 + AT_rich Low_complexity Low_complexity 1 25 0 668 287 57 45 chr5 165904323 165904567 -37180965 - MIR SINE MIR -1 261 15 832 278 87 51 chr5 165905549 165905946 -37179586 + L2 LINE L2 2701 3128 -185 2412 102 0 0 chr5 165905946 165906249 -37179283 - AluSg SINE Alu -7 303 1 832 278 87 51 chr5 165906249 165906442 -37179090 + L2 LINE L2 3128 3312 -1 307 203 0 0 chr5 165907014 165907073 -37178459 + MLT1L LTR MaLR 152 210 -405 605 146 0 0 chr5 165907073 165907162 -37178370 + AluSc SINE Alu 204 292 -17 278 263 131 46 chr5 165907163 165907338 -37178194 + MLT1L LTR MaLR 197 386 -229 208 296 37 0 chr5 165907462 165907516 -37178016 + L2 LINE L2 2607 2662 -652 1080 277 163 12 chr5 165907549 165908040 -37177492 + L2 LINE L2 2744 3304 -9 229 191 0 0 chr5 165908585 165908627 -37176905 - L2 LINE L2 -5 3308 3267 342 289 54 36 chr5 165908667 165908866 -37176666 + MIR SINE MIR 63 262 0 507 309 41 69 chr5 165909027 165909318 -37176214 + L2 LINE L2 2985 3267 -5 562 306 16 72 chr5 165909873 165909919 -37175613 + MER5A DNA MER1_type 7 54 -135 2185 108 10 0 chr5 165909919 165910214 -37175318 + AluSg SINE Alu 1 298 -12 562 306 16 72 chr5 165910214 165910360 -37175172 + MER5A DNA MER1_type 54 188 -1 22 0 0 0 chr5 165910743 165910765 -37174767 + AT_rich Low_complexity Low_complexity 1 22 0 653 341 65 35 chr5 165911579 165912010 -37173522 + L2 LINE L2 2182 2625 -689 319 321 118 21 chr5 165912052 165912289 -37173243 - MIR SINE MIR -1 261 2 181 241 204 0 chr5 165912506 165912560 -37172972 + L2 LINE L2 3208 3272 0 307 232 90 19 chr5 165912567 165912722 -37172810 + L1ME4a LINE L1 5953 6118 -3 291 328 57 33 chr5 165912935 165913057 -37172475 + L2 LINE L2 3137 3261 -11 375 101 113 0 chr5 165913209 165913368 -37172164 + (TA)n Simple_repeat Simple_repeat 1 177 0 228 171 14 29 chr5 165913358 165913428 -37172104 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 * 366 42 0 0 chr5 165913436 165913484 -37172048 + (CA)n Simple_repeat Simple_repeat 2 49 0 391 220 70 10 chr5 165913507 165913607 -37171925 - MIR SINE MIR -99 163 58 216 286 14 29 chr5 165914068 165914138 -37171394 + MER5A DNA MER1_type 43 111 -78 433 233 32 95 chr5 165914147 165914336 -37171196 + MIR SINE MIR 11 187 -75 192 365 0 0 chr5 165914369 165914443 -37171089 - MIR SINE MIR -2 260 187 236 277 45 90 chr5 165914599 165914666 -37170866 + MER5A DNA MER1_type 16 84 -105 2347 59 0 65 chr5 165914666 165914988 -37170544 + AluY SINE Alu 1 301 -10 236 277 45 90 chr5 165914988 165915097 -37170435 + MER5A DNA MER1_type 84 184 -5 223 289 19 67 chr5 165915124 165915228 -37170304 + L2 LINE L2 3199 3297 -16 802 201 28 3 chr5 165915347 165915555 -37169977 + L1M2 LINE L1 5609 5823 -345 237 162 44 0 chr5 165915555 165915623 -37169909 + (TA)n Simple_repeat Simple_repeat 1 71 0 2692 120 41 43 chr5 165915623 165916133 -37169399 + L1MA6 LINE L1 5782 6290 -10 26 50 0 0 chr5 165916135 165916175 -37169357 + AT_rich Low_complexity Low_complexity 1 40 0 324 308 185 0 chr5 165918471 165918617 -37166915 + MIR SINE MIR 3 175 -87 620 287 44 0 chr5 165918738 165918919 -37166613 - MIR SINE MIR -37 225 37 650 229 74 11 chr5 165920034 165920209 -37165323 - Charlie8 DNA MER1_type -2168 249 64 300 311 47 54 chr5 165920326 165920474 -37165058 - MIR3 SINE MIR -14 194 48 332 264 132 0 chr5 165920923 165921044 -37164488 - MIR3 SINE MIR -37 171 35 339 85 0 0 chr5 165921224 165921271 -37164261 + (GA)n Simple_repeat Simple_repeat 2 48 0 459 237 32 19 chr5 165922432 165922450 -37163082 - L1MA10 LINE L1 -2 6332 6315 1923 201 105 91 chr5 165922450 165922589 -37162943 - L1ME1 LINE L1 -12 6223 6087 1956 142 14 0 chr5 165922589 165922884 -37162648 - AluSx SINE Alu -13 299 1 1923 201 105 91 chr5 165922884 165923116 -37162416 - L1ME1 LINE L1 -148 6087 5860 2429 96 0 0 chr5 165923116 165923419 -37162113 - AluSg SINE Alu -7 303 1 1923 201 105 91 chr5 165923419 165923624 -37161908 - L1ME1 LINE L1 -375 5860 5659 5260 129 24 4 chr5 165923624 165925480 -37160052 - L1PA15 LINE L1 -1 6164 4282 1923 201 105 91 chr5 165925480 165925587 -37159945 - L1ME1 LINE L1 -576 5659 5555 3478 50 5 2 chr5 165925587 165926028 -37159504 + L1PA5 LINE L1 5708 6149 -5 1923 201 105 91 chr5 165926028 165926133 -37159399 - L1ME1 LINE L1 -680 5555 5421 966 260 46 30 chr5 165926100 165926557 -37158975 - L1ME1 LINE L1 -1949 4266 3786 * 4139 248 69 15 chr5 165926569 165928304 -37157228 - L1ME1 LINE L1 -2484 3731 1931 231 200 167 56 chr5 165928383 165928473 -37157059 + MLT1J LTR MaLR 399 498 -13 273 342 36 9 chr5 165928713 165928824 -37156708 + L2 LINE L2 3151 3264 -8 320 298 185 0 chr5 165930629 165930780 -37154752 - MIR SINE MIR -37 225 47 1247 115 0 0 chr5 165930784 165930967 -37154565 + L1PA13 LINE L1 5978 6160 -3 1021 255 196 50 chr5 165931719 165932587 -37152945 - L2 LINE L2 -6 3307 2316 381 331 45 0 chr5 165932692 165932825 -37152707 + L2 LINE L2 3134 3272 0 405 278 20 7 chr5 165933755 165933906 -37151626 - MER103 DNA DNA -1 165 13 316 295 19 48 chr5 165934030 165934135 -37151397 + MIR SINE MIR 20 121 -141 568 253 0 65 chr5 165934298 165934452 -37151080 + MIR SINE MIR 1 143 -67 482 287 63 59 chr5 165935335 165935572 -37149960 + MIR SINE MIR 25 262 0 797 293 48 16 chr5 165936154 165936403 -37149129 - MIR SINE MIR 0 262 6 182 351 0 0 chr5 165936581 165936638 -37148894 - L2 LINE L2 -11 3261 3205 298 266 206 27 chr5 165936686 165936756 -37148776 + MIR SINE MIR 46 102 -160 198 0 0 0 chr5 165936756 165936778 -37148754 + (TC)n Simple_repeat Simple_repeat 1 22 0 298 266 206 27 chr5 165936778 165936891 -37148641 + MIR SINE MIR 102 262 0 210 366 0 10 chr5 165937028 165937129 -37148403 - MER5A DNA MER1_type -3 186 87 1448 181 119 29 chr5 165937274 165937617 -37147915 - MLT1A2 LTR MaLR 0 374 1 189 0 0 0 chr5 165938120 165938141 -37147391 + (ATG)n Simple_repeat Simple_repeat 2 22 0 428 238 112 28 chr5 165938181 165938324 -37147208 - MIR SINE MIR -67 195 41 325 302 23 31 chr5 165939225 165939354 -37146178 + MIR SINE MIR 119 246 -16 367 324 20 0 chr5 165939365 165939513 -37146019 + (CTA)n Simple_repeat Simple_repeat 1 151 0 377 287 150 49 chr5 165940012 165940298 -37145234 - MLT1K LTR MaLR -71 517 203 2315 64 0 4 chr5 165940638 165940919 -37144613 + AluY SINE Alu 16 295 -16 1094 62 0 0 chr5 165941234 165941364 -37144168 + AluY SINE Alu 2 131 -180 485 333 76 48 chr5 165941403 165941579 -37143953 - MLT1K LTR MaLR -91 497 328 2456 69 7 0 chr5 165941579 165941884 -37143648 - AluY SINE Alu -4 307 1 485 333 76 48 chr5 165941884 165942127 -37143405 - MLT1K LTR MaLR -260 328 66 230 287 58 58 chr5 165942207 165942294 -37143238 + L2 LINE L2 3180 3266 -6 1839 178 64 13 chr5 165942906 165943283 -37142249 + MSTD LTR MaLR 1 396 0 2152 123 0 0 chr5 165943679 165943979 -37141553 + AluSx SINE Alu 1 300 -12 2020 137 7 0 chr5 165944676 165944976 -37140556 + AluSx SINE Alu 1 302 -10 303 293 48 14 chr5 165945073 165945220 -37140312 - L1ME4a LINE L1 -31 6090 5939 3159 203 59 4 chr5 165945254 165945949 -37139583 + L1MD2 LINE L1 5614 6346 -13 297 247 34 113 chr5 165945974 165946213 -37139319 - L1ME4a LINE L1 -253 5868 5649 698 251 48 161 chr5 165946466 165947055 -37138477 + MLT1G LTR MaLR 62 583 -7 402 333 116 18 chr5 165947082 165947307 -37138225 + MIR SINE MIR 1 247 -15 776 264 47 5 chr5 165947504 165947716 -37137816 - MER58A DNA MER1_type -3 221 1 404 280 35 35 chr5 165948096 165948239 -37137293 + MIR3 SINE MIR 3 145 -63 234 404 44 7 chr5 165948333 165948469 -37137063 + L2 LINE L2 3169 3309 -4 2092 122 3 29 chr5 165949608 165949919 -37135613 - AluSx SINE Alu -9 303 1 277 230 92 11 chr5 165950315 165950402 -37135130 - MIR SINE MIR -109 153 60 2096 172 121 71 chr5 165950515 165950898 -37134634 - MLT2B1 LTR ERVL 0 520 105 1899 169 128 13 chr5 165950898 165951282 -37134250 - MSTA LTR MaLR 0 428 1 2096 172 121 71 chr5 165951282 165951393 -37134139 - MLT2B1 LTR ERVL -415 105 1 2389 253 132 17 chr5 165951589 165951631 -37133901 - L1ME2 LINE L1 -15 6149 6113 906 205 55 10 chr5 165951631 165951831 -37133701 + MER6B DNA MER2_type 1 209 -1 2389 253 132 17 chr5 165951831 165953300 -37132232 - L1ME2 LINE L1 -51 6113 4458 8728 245 34 12 chr5 165953307 165955661 -37129871 - L1MA4A LINE L1 -13 6992 4452 2046 133 0 38 chr5 165955661 165955976 -37129556 + AluSg SINE Alu 1 303 -7 8728 245 34 12 chr5 165955976 165957539 -37127993 - L1MA4A LINE L1 -2553 4452 2926 591 156 0 28 chr5 165957622 165957731 -37127801 - L1MA4A LINE L1 -4262 2587 2482 197 143 48 0 chr5 165957748 165957790 -37127742 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 304 272 0 43 chr5 165957792 165957884 -37127648 + L1MC4 LINE L1 6614 6701 -1341 246 62 0 0 chr5 165957894 165957926 -37127606 + (TA)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr5 165957926 165957953 -37127579 + (GA)n Simple_repeat Simple_repeat 2 28 0 1200 168 16 0 chr5 165957971 165958162 -37127370 - AluJb SINE Alu -108 204 11 93 73 0 0 chr5 165958166 165958357 -37127175 + AT_rich Low_complexity Low_complexity 1 191 0 195 50 0 0 chr5 165958360 165958660 -37126872 + AT_rich Low_complexity Low_complexity 1 300 0 21 0 0 0 chr5 165958642 165958663 -37126869 + AT_rich Low_complexity Low_complexity 1 21 0 * 1810 170 82 10 chr5 165958663 165959075 -37126457 - L1M2 LINE L1 -3960 3249 2808 * 16850 163 21 5 chr5 165959072 165963163 -37122369 - L1PA13 LINE L1 -3 6160 2009 283 86 0 7 chr5 165963165 165963209 -37122323 - MSTA LTR MaLR -322 42 1 9993 124 19 32 chr5 165963209 165964811 -37120721 - THE1C-int LTR MaLR 0 1580 1 1266 139 72 70 chr5 165964811 165965242 -37120290 - THE1C LTR MaLR 0 375 1 5400 199 35 67 chr5 165965250 165966716 -37118816 - L1M2 LINE L1 -4418 2791 1344 1936 244 78 2 chr5 165966848 165967299 -37118233 - L1M2 LINE L1 -6362 847 363 3174 233 81 79 chr5 165967301 165967865 -37117667 - L1MEc LINE L1 -1676 4539 3978 302 128 0 0 chr5 165967865 165967912 -37117620 - Tigger5 DNA MER2_type 0 2323 2277 3174 233 81 79 chr5 165967912 165967925 -37117607 - L1MEc LINE L1 -2237 3978 3967 2176 109 10 3 chr5 165967925 165968229 -37117303 + AluSx SINE Alu 1 306 -6 3174 233 81 79 chr5 165968229 165968503 -37117029 - L1MEc LINE L1 -2248 3967 3695 757 208 0 0 chr5 165968503 165968633 -37116899 - FLAM_C SINE Alu -2 131 2 3174 233 81 79 chr5 165968633 165969496 -37116036 - L1MEc LINE L1 -2520 3695 2835 2439 130 16 29 chr5 165969496 165969942 -37115590 - L1PA13 LINE L1 -1 6162 5723 3174 233 81 79 chr5 165969942 165970405 -37115127 - L1MEc LINE L1 -3380 2835 2355 3198 138 39 14 chr5 165970405 165970919 -37114613 - MER1A DNA MER1_type 0 527 1 3174 233 81 79 chr5 165970919 165971109 -37114423 - L1MEc LINE L1 -3860 2355 2167 5860 48 0 0 chr5 165971192 165971944 -37113588 - L1PA5 LINE L1 0 6154 5403 27088 122 18 67 chr5 165971944 165973086 -37112446 - L1PA8 LINE L1 -103 6069 4873 2182 104 7 0 chr5 165973086 165973375 -37112157 - AluSp SINE Alu -22 291 1 27088 122 18 67 chr5 165973375 165976721 -37108811 - L1PA8 LINE L1 -1299 4873 1994 2388 191 77 9 chr5 165976721 165977264 -37108268 + LTR22 LTR ERVK 1 580 0 27088 122 18 67 chr5 165977264 165979164 -37106368 - L1PA8 LINE L1 -4178 1994 3 249 302 66 16 chr5 165979646 165979828 -37105704 - HAL1b LINE L1 -433 915 725 226 183 70 42 chr5 165979853 165979924 -37105608 - HAL1b LINE L1 -687 661 589 1746 159 125 46 chr5 165979930 165979963 -37105569 - MLT1C LTR MaLR 0 467 438 6017 149 65 18 chr5 165979963 165981138 -37104394 + Tigger3b DNA MER2_type 1 1230 -1 1746 159 125 46 chr5 165981138 165981537 -37103995 - MLT1C LTR MaLR -29 438 1 4749 134 46 27 chr5 165982268 165983760 -37101772 + L1PA15 LINE L1 4666 6164 -1 1090 182 88 10 chr5 165984130 165984427 -37101105 + MER33 DNA MER1_type 1 320 -4 231 231 0 19 chr5 165984435 165984487 -37101045 + L2 LINE L2 3222 3272 0 516 272 98 38 chr5 165984602 165984837 -37100695 + MIR SINE MIR 14 262 0 399 344 58 54 chr5 165985685 165985909 -37099623 + MIR SINE MIR 20 244 -18 2561 157 64 15 chr5 165987445 165988025 -37097507 + L1MA9 LINE L1 5157 5781 -531 207 0 0 0 chr5 165988026 165988049 -37097483 + (TG)n Simple_repeat Simple_repeat 1 23 0 3243 133 48 2 chr5 165988051 165988615 -37096917 + HSMAR2 DNA Mariner 4 593 -709 999 261 115 8 chr5 165988621 165988768 -37096764 - AluSg SINE Alu -19 291 161 525 99 0 0 chr5 165988768 165988849 -37096683 + (TGGA)n Simple_repeat Simple_repeat 3 83 0 228 35 0 0 chr5 165988848 165988877 -37096655 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 * 999 261 115 8 chr5 165988849 165988990 -37096542 - AluSg SINE Alu -149 161 3 4319 111 35 4 chr5 165988991 165989687 -37095845 + HSMAR2 DNA Mariner 580 1296 -6 2065 163 34 48 chr5 165989692 165990188 -37095344 + L1MA9 LINE L1 5785 6273 -39 560 266 68 31 chr5 165990401 165990593 -37094939 + MIR SINE MIR 63 261 -1 449 299 47 39 chr5 165990907 165991141 -37094391 - MIR SINE MIR -20 242 7 2401 99 0 0 chr5 165991574 165991887 -37093645 + AluSq SINE Alu 1 313 0 534 306 26 52 chr5 165991887 165992119 -37093413 + MIR SINE MIR 20 245 -17 239 341 31 47 chr5 165992765 165992894 -37092638 + MIR SINE MIR 25 151 -57 257 274 214 0 chr5 165992900 165992984 -37092548 + L2 LINE L2 3193 3294 -19 272 362 19 9 chr5 165993407 165993512 -37092020 - MIR SINE MIR -129 133 28 646 205 53 63 chr5 165993599 165993789 -37091743 - MIR SINE MIR -2 260 73 235 222 0 0 chr5 165994261 165994306 -37091226 - L2 LINE L2 0 3272 3228 22 0 0 0 chr5 165994318 165994340 -37091192 + AT_rich Low_complexity Low_complexity 1 22 0 380 269 83 65 chr5 165994404 165994606 -37090926 - MIR SINE MIR -1 261 49 197 304 0 0 chr5 165994635 165994691 -37090841 - MIR SINE MIR -67 195 140 331 250 25 0 chr5 165994894 165994974 -37090558 - MIR SINE MIR -120 142 61 235 311 0 0 chr5 165995529 165995590 -37089942 + MIR SINE MIR 85 145 -63 271 255 20 41 chr5 165996405 165996503 -37089029 - L1MEd LINE L1 -5423 696 601 766 222 7 0 chr5 165997132 165997276 -37088256 + MER5A DNA MER1_type 9 153 -36 241 267 35 12 chr5 165998297 165998383 -37087149 + MIR SINE MIR 175 262 0 283 381 95 18 chr5 165998782 165998950 -37086582 - MIR3 SINE MIR -13 195 15 290 286 0 13 chr5 165999292 165999369 -37086163 + CT-rich Low_complexity Low_complexity 2 77 0 313 295 83 39 chr5 165999576 165999732 -37085800 + MIR SINE MIR 1 163 -99 2400 94 0 7 chr5 165999823 166000131 -37085401 + AluY SINE Alu 1 306 -5 386 272 92 53 chr5 166000145 166000377 -37085155 + MLT1L LTR MaLR 110 409 -202 231 167 167 0 chr5 166000503 166000563 -37084969 + MER116 DNA Mariner 3 72 -8 261 243 100 0 chr5 166000774 166000844 -37084688 + MIR SINE MIR 185 261 -1 3222 128 43 0 chr5 166001399 166001906 -37083626 - MER1A DNA MER1_type 0 529 1 411 200 57 19 chr5 166002112 166002217 -37083315 - MER112 DNA MER1_type -58 202 94 1660 194 40 0 chr5 166002219 166002591 -37082941 - Charlie1 DNA MER1_type -185 2576 2190 849 105 0 0 chr5 166002604 166002728 -37082804 - L1PB3 LINE L1 -1 6153 6030 869 224 50 118 chr5 166002814 166003297 -37082235 - L2 LINE L2 -45 3268 2794 186 133 0 0 chr5 166003599 166003629 -37081903 + (A)n Simple_repeat Simple_repeat 1 30 0 194 257 149 27 chr5 166004007 166004081 -37081451 + L2 LINE L2 3224 3306 -7 204 281 62 0 chr5 166004207 166004271 -37081261 - MIR SINE MIR 0 262 195 189 282 42 28 chr5 166004736 166004807 -37080725 - MIR SINE MIR -142 120 49 205 247 146 22 chr5 166004953 166005042 -37080490 + MIR SINE MIR 40 139 -69 231 61 0 0 chr5 166005494 166005527 -37080005 + (CA)n Simple_repeat Simple_repeat 2 34 0 190 333 37 37 chr5 166006194 166006302 -37079230 - MIR SINE MIR -84 124 17 22 0 0 0 chr5 166006690 166006712 -37078820 + AT_rich Low_complexity Low_complexity 1 22 0 5966 52 3 0 chr5 166007099 166007835 -37077697 + L1PA5 LINE L1 5414 6151 -3 249 294 252 17 chr5 166007869 166008049 -37077483 + MIR SINE MIR 42 262 0 2914 192 22 19 chr5 166008083 166008730 -37076802 + L1MC3 LINE L1 7130 7778 -7 261 291 45 55 chr5 166008739 166008849 -37076683 + L3 LINE CR1 1462 1570 -7 582 306 29 5 chr5 166009145 166009351 -37076181 - MIR SINE MIR 0 262 52 1766 146 188 0 chr5 166009467 166009823 -37075709 + MSTA LTR MaLR 1 423 -5 21 0 0 0 chr5 166009926 166009947 -37075585 + AT_rich Low_complexity Low_complexity 1 21 0 344 340 43 19 chr5 166010282 166010415 -37075117 - MIR SINE MIR -1 261 120 2188 114 3 19 chr5 166010415 166010730 -37074802 + AluSg SINE Alu 1 310 0 344 340 43 19 chr5 166010730 166010805 -37074727 - MIR SINE MIR -142 120 48 226 294 11 33 chr5 166011104 166011196 -37074336 + MIR SINE MIR 78 167 -95 307 322 99 6 chr5 166011303 166011474 -37074058 - MIR SINE MIR -10 252 66 238 277 69 35 chr5 166012106 166012219 -37073313 + MIR SINE MIR 7 124 -84 285 323 147 31 chr5 166012272 166012625 -37072907 + L2 LINE L2 2440 2833 -481 691 288 82 51 chr5 166012625 166013038 -37072494 - MLT1K LTR MaLR 0 588 163 881 261 90 55 chr5 166013196 166013683 -37071849 - MLT1H1 LTR MaLR -35 520 17 268 335 161 41 chr5 166013734 166013976 -37071556 + L2 LINE L2 2916 3186 -86 239 253 30 50 chr5 166014718 166014817 -37070715 + L1ME4a LINE L1 5549 5645 -476 300 291 40 25 chr5 166014829 166015028 -37070504 + L1ME4a LINE L1 5741 5942 -220 202 250 0 42 chr5 166015306 166015378 -37070154 + (CATA)n Simple_repeat Simple_repeat 2 70 0 246 211 109 23 chr5 166015425 166015553 -37069979 + L1ME4a LINE L1 5968 6106 -15 640 299 21 23 chr5 166016407 166016641 -37068891 - MIR SINE MIR -14 248 17 215 274 36 15 chr5 166016668 166016783 -37068749 - MIR SINE MIR -51 211 93 189 0 0 0 chr5 166016908 166016929 -37068603 + (A)n Simple_repeat Simple_repeat 1 21 0 275 223 21 105 chr5 166017195 166017222 -37068310 + MLT1K LTR MaLR 83 111 -477 2114 113 3 0 chr5 166017222 166017505 -37068027 + AluSp SINE Alu 19 302 -11 2627 95 17 3 chr5 166017506 166017865 -37067667 + THE1B LTR MaLR 1 364 0 275 223 21 105 chr5 166017865 166017963 -37067569 + MLT1K LTR MaLR 110 212 -376 2137 112 3 24 chr5 166018162 166018458 -37067074 + AluSx SINE Alu 1 290 -22 30 0 0 0 chr5 166019341 166019371 -37066161 + AT_rich Low_complexity Low_complexity 1 30 0 7434 37 0 0 chr5 166019371 166020579 -37064953 - L1PA5 LINE L1 -11 6143 4935 10075 44 0 2 chr5 166020577 166021880 -37063652 + L1PA5 LINE L1 3656 4955 -1191 2200 129 0 3 chr5 166022118 166022428 -37063104 - AluSc SINE Alu 0 309 1 23 0 0 0 chr5 166022431 166022454 -37063078 + AT_rich Low_complexity Low_complexity 1 23 0 417 226 19 50 chr5 166022840 166022999 -37062533 + L1ME LINE L1 5191 5344 -802 255 291 16 55 chr5 166023195 166023322 -37062210 + L1ME LINE L1 5450 5571 -591 383 61 0 0 chr5 166024206 166024255 -37061277 - THE1B LTR MaLR -1 363 315 933 146 7 0 chr5 166024257 166024394 -37061138 - AluSg/x SINE Alu -15 297 160 597 244 134 14 chr5 166025325 166025542 -37059990 + MIR SINE MIR 4 246 -16 1659 183 25 48 chr5 166025745 166025913 -37059619 - MER7A DNA MER2_type -2692 346 176 1347 101 83 28 chr5 166025913 166026131 -37059401 + MER30 DNA MER1_type 1 230 0 1659 183 25 48 chr5 166026131 166026318 -37059214 - MER7A DNA MER2_type -2862 176 1 293 175 18 0 chr5 166026595 166026652 -37058880 - MLT1H LTR MaLR -4 545 488 710 253 58 27 chr5 166026706 166027034 -37058498 - MLT1H LTR MaLR -211 338 1 576 221 15 0 chr5 166027237 166027373 -37058159 - Charlie8 DNA MER1_type -2204 213 76 414 237 0 0 chr5 166027736 166027812 -37057720 + MIR SINE MIR 18 93 -169 473 288 88 18 chr5 166027999 166028169 -37057363 - MIR SINE MIR -49 213 32 430 263 153 7 chr5 166028547 166028684 -37056848 + MIR SINE MIR 74 230 -32 24 0 0 0 chr5 166029173 166029197 -37056335 + AT_rich Low_complexity Low_complexity 1 24 0 647 181 141 126 chr5 166029464 166029944 -37055588 - LTR59 LTR ERV1 0 597 136 395 217 23 23 chr5 166030026 166030142 -37055390 - MER4A LTR ERV1 -349 116 1 767 326 70 30 chr5 166030268 166030907 -37054625 - L2 LINE L2 -1 3312 2646 855 197 48 159 chr5 166030907 166031167 -37054365 - MLT1A2 LTR MaLR 0 374 177 3578 42 0 0 chr5 166031167 166031599 -37053933 - L1PA5 LINE L1 -6 6148 5717 855 197 48 159 chr5 166031599 166031759 -37053773 - MLT1A2 LTR MaLR -197 177 1 279 262 71 0 chr5 166031761 166031845 -37053687 - L2 LINE L2 -675 2639 2550 11553 98 12 1 chr5 166032948 166034768 -37050764 + L1M4 LINE L1 3617 5452 -719 1276 190 16 67 chr5 166035069 166035108 -37050424 - MLT1A1 LTR MaLR -11 354 315 2176 71 11 3 chr5 166035108 166035390 -37050142 - AluY SINE Alu -8 303 20 1276 190 16 67 chr5 166035390 166035723 -37049809 - MLT1A1 LTR MaLR -50 315 1 529 113 0 0 chr5 166035727 166035807 -37049725 - MADE1 DNA Mariner 0 80 1 287 369 54 20 chr5 166036565 166036714 -37048818 - MIR SINE MIR -76 186 33 267 260 0 41 chr5 166036871 166036944 -37048588 - L2 LINE L2 0 3313 3244 245 282 62 72 chr5 166037085 166037280 -37048252 + LTR16C LTR ERVL 295 487 -4 433 348 43 33 chr5 166037791 166038159 -37047373 + ERVL LTR ERVL 4704 5075 -689 2686 130 55 6 chr5 166038536 166039028 -37046504 - L1MA6 LINE L1 0 6300 5785 2892 146 16 21 chr5 166039028 166039759 -37045773 + L1MA6 LINE L1 5068 5788 -512 4049 196 39 67 chr5 166039830 166040518 -37045014 - MSTD-int LTR MaLR -721 1014 363 1846 162 3 10 chr5 166040518 166040832 -37044700 - AluJo SINE Alu 0 312 1 4049 196 39 67 chr5 166040832 166041186 -37044346 - MSTD-int LTR MaLR -1372 363 1 703 204 82 38 chr5 166041208 166041512 -37044020 - MSTD LTR MaLR -38 327 1 253 266 31 0 chr5 166042143 166042207 -37043325 - MIR3 SINE MIR -30 178 113 479 293 24 0 chr5 166042263 166042386 -37043146 - L2 LINE L2 -1 3271 3146 1215 196 80 59 chr5 166042474 166042862 -37042670 + MSTD LTR MaLR 1 396 0 217 275 55 33 chr5 166043078 166043169 -37042363 + MER5A DNA MER1_type 81 173 -16 * 345 311 19 0 chr5 166043093 166043196 -37042336 - MER5A DNA MER1_type -83 106 2 24 77 0 0 chr5 166043800 166043852 -37041680 + AT_rich Low_complexity Low_complexity 1 52 0 1350 65 0 0 chr5 166044085 166044255 -37041277 - L1PA8 LINE L1 -12 6160 5991 21 0 0 0 chr5 166044830 166044851 -37040681 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 166045906 166045930 -37039602 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 323 209 9 55 chr5 166046250 166046360 -37039172 - MER117 DNA MER1_type -55 142 38 189 0 0 0 chr5 166046441 166046462 -37039070 + (A)n Simple_repeat Simple_repeat 1 21 0 1350 221 38 0 chr5 166046526 166046843 -37038689 + MER58B DNA MER1_type 1 329 -12 182 296 86 0 chr5 166048327 166048408 -37037124 + MIR SINE MIR 102 189 -73 386 309 120 17 chr5 166049016 166049191 -37036341 + MIR SINE MIR 20 212 -50 227 299 56 37 chr5 166049725 166049832 -37035700 - MIR3 SINE MIR -11 197 89 240 316 211 7 chr5 166049971 166050123 -37035409 + MIR SINE MIR 80 262 0 629 115 19 0 chr5 166050681 166050785 -37034747 + CT-rich Low_complexity Low_complexity 1 106 0 1867 154 9 28 chr5 166050794 166051112 -37034420 - AluJo SINE Alu 0 312 1 318 50 0 0 chr5 166051980 166052020 -37033512 + (TG)n Simple_repeat Simple_repeat 2 41 0 14898 132 11 101 chr5 166052164 166052566 -37032966 + L1P LINE L1 12 449 -5697 254 51 34 34 chr5 166052566 166052625 -37032907 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 14898 132 11 101 chr5 166052625 166055598 -37029934 + L1P LINE L1 449 3083 -3063 6905 64 7 1 chr5 166055599 166056644 -37028888 + L1PA7 LINE L1 5108 6154 0 2898 171 7 5 chr5 166056670 166057231 -37028301 + L1MB3 LINE L1 5602 6163 -20 270 335 52 66 chr5 166057785 166057997 -37027535 + L2 LINE L2 2851 3059 -213 414 357 27 30 chr5 166058246 166058509 -37027023 - MIR SINE MIR 0 262 1 264 341 66 0 chr5 166058820 166058911 -37026621 + L2 LINE L2 3146 3242 -30 193 328 227 16 chr5 166059433 166059680 -37025852 + L2 LINE L2 2810 3108 -164 529 328 115 24 chr5 166059926 166060361 -37025171 - L2 LINE L2 -37 3276 2797 472 250 36 113 chr5 166060941 166061189 -37024343 - MIR SINE MIR -19 243 15 405 0 0 0 chr5 166061383 166061428 -37024104 + (TA)n Simple_repeat Simple_repeat 1 45 0 235 342 125 8 chr5 166061665 166061785 -37023747 + MIR3 SINE MIR 61 194 -14 209 338 0 26 chr5 166061944 166062021 -37023511 - L2 LINE L2 -38 3234 3160 484 245 14 14 chr5 166062118 166062257 -37023275 + Charlie8 DNA MER1_type 84 222 -2195 294 226 60 40 chr5 166062551 166062669 -37022863 + MIR SINE MIR 31 149 -78 2052 187 107 16 chr5 166062892 166066036 -37019496 - SATR1 Satellite Satellite -1 3427 1 35 63 0 0 chr5 166066053 166066116 -37019416 + AT_rich Low_complexity Low_complexity 1 63 0 350 219 16 53 chr5 166066142 166066329 -37019203 + (TTA)n Simple_repeat Simple_repeat 1 180 0 26 30 0 0 chr5 166066339 166066372 -37019160 + AT_rich Low_complexity Low_complexity 1 33 0 2159 187 103 7 chr5 166066378 166069308 -37016224 + SATR1 Satellite Satellite 1 3211 -1 1860 222 86 25 chr5 166069338 166070878 -37014654 - SATR1 Satellite Satellite -85 1634 1 363 78 0 0 chr5 166071168 166071219 -37014313 + (CAGCC)n Simple_repeat Simple_repeat 4 54 0 231 173 0 19 chr5 166071710 166071762 -37013770 + L1M3 LINE L1 5769 5819 -352 2397 71 0 3 chr5 166073191 166073485 -37012047 + AluY SINE Alu 1 293 -18 235 329 0 0 chr5 166074170 166074240 -37011292 - MIR SINE MIR -6 256 187 277 267 48 96 chr5 166074357 166074544 -37010988 + MER102b DNA MER1_type 164 341 0 233 258 290 0 chr5 166074544 166074668 -37010864 - MIR SINE MIR -98 164 5 217 269 32 13 chr5 166074870 166075026 -37010506 + (TA)n Simple_repeat Simple_repeat 2 160 0 193 257 14 40 chr5 166075161 166075235 -37010297 - MIR SINE MIR -96 166 95 289 304 175 41 chr5 166076612 166076783 -37008749 + MIR3 SINE MIR 15 208 0 463 248 164 63 chr5 166076840 166077284 -37008248 - MLT1J LTR MaLR -7 504 16 2401 28 0 3 chr5 166077357 166077672 -37007860 + AluY SINE Alu 1 314 0 571 316 51 54 chr5 166078457 166078811 -37006721 - L2 LINE L2 -29 3284 2932 41 48 0 0 chr5 166079256 166079318 -37006214 + AT_rich Low_complexity Low_complexity 1 62 0 2130 107 3 14 chr5 166079617 166079908 -37005624 + AluSc SINE Alu 1 288 -21 2990 178 28 5 chr5 166080023 166080624 -37004908 - L1MB3 LINE L1 0 6183 5569 650 274 6 0 chr5 166080891 166081055 -37004477 + MIR SINE MIR 93 257 -5 243 253 105 0 chr5 166082565 166082660 -37002872 - MER103 DNA DNA -10 156 52 22 56 0 0 chr5 166082671 166082707 -37002825 + AT_rich Low_complexity Low_complexity 1 36 0 1557 190 14 40 chr5 166083741 166084000 -37001532 - MER58B DNA MER1_type -2082 338 89 2387 86 3 0 chr5 166084000 166084302 -37001230 + AluSp SINE Alu 1 303 -10 1557 190 14 40 chr5 166084302 166084389 -37001143 - MER58B DNA MER1_type -2331 89 1 758 218 35 0 chr5 166085385 166085559 -36999973 + MIR SINE MIR 83 262 0 2293 96 13 0 chr5 166085792 166086093 -36999439 + AluSx SINE Alu 2 306 -6 797 289 156 40 chr5 166086113 166086820 -36998712 - L2 LINE L2 -708 2606 1802 2483 66 0 3 chr5 166086820 166087125 -36998407 + AluY SINE Alu 1 304 -7 797 289 156 40 chr5 166087125 166087186 -36998346 - L2 LINE L2 -1512 1802 1749 365 293 19 0 chr5 166087298 166087404 -36998128 + MER45 DNA AcHobo 1 108 -845 200 292 31 0 chr5 166087608 166087673 -36997859 - MIR SINE MIR -138 124 58 758 160 0 0 chr5 166088081 166088200 -36997332 + FLAM_C SINE Alu 1 119 -24 534 178 0 0 chr5 166088231 166088321 -36997211 + AluJb SINE Alu 207 296 -16 29 0 0 0 chr5 166088412 166088441 -36997091 + AT_rich Low_complexity Low_complexity 1 29 0 283 224 122 0 chr5 166088763 166088870 -36996662 - L1ME4a LINE L1 -11 6110 5991 438 222 91 40 chr5 166088888 166089064 -36996468 + L2 LINE L2 3074 3258 -55 1123 115 0 19 chr5 166089659 166089816 -36995716 - AluSx SINE Alu -158 154 1 764 156 32 59 chr5 166090229 166090415 -36995117 - MLT1C LTR MaLR -270 197 17 299 298 204 11 chr5 166090415 166090596 -36994936 + MIR SINE MIR 47 262 0 1410 186 60 34 chr5 166090620 166090970 -36994562 - LTR10A LTR ERV1 -61 548 190 2248 75 14 3 chr5 166091018 166091313 -36994219 + AluY SINE Alu 1 298 -13 238 237 51 0 chr5 166091325 166091384 -36994148 - LTR10A LTR ERV1 -547 62 1 12547 142 27 28 chr5 166091387 166092662 -36992870 - Harlequin LTR ERV1 -4 6645 5371 2421 81 3 3 chr5 166092662 166092972 -36992560 - AluSp SINE Alu -3 310 1 12547 142 27 28 chr5 166092972 166095704 -36989828 - Harlequin LTR ERV1 -1278 5371 895 863 38 0 0 chr5 166095704 166095810 -36989722 - L1PA5 LINE L1 0 6154 6049 12547 142 27 28 chr5 166095810 166096002 -36989530 - Harlequin LTR ERV1 -5754 895 704 629 96 54 6 chr5 166096003 166096169 -36989363 + CT-rich Low_complexity Low_complexity 1 174 0 644 90 60 0 chr5 166096184 166096351 -36989181 + CT-rich Low_complexity Low_complexity 1 177 0 326 154 50 28 chr5 166096452 166096634 -36988898 - LTR10A-int LTR ERV1 -5871 1025 840 263 237 26 0 chr5 166097010 166097086 -36988446 - LTR10A-int LTR ERV1 -7420 365 288 716 237 47 49 chr5 166097112 166097430 -36988102 - LTR10A-int LTR ERV1 -6335 314 7 1546 185 114 43 chr5 166097444 166097866 -36987666 - LTR10A LTR ERV1 -61 548 97 289 333 63 11 chr5 166098296 166098470 -36987062 - MIR SINE MIR -52 210 28 225 276 103 83 chr5 166098511 166098667 -36986865 - MIR SINE MIR -69 193 35 459 252 61 8 chr5 166098693 166098824 -36986708 - MIR SINE MIR 0 262 125 216 67 0 0 chr5 166098824 166098854 -36986678 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4358 272 100 28 chr5 166098862 166101165 -36984367 + HAL1 LINE L1 12 2480 -27 269 177 13 0 chr5 166101319 166101398 -36984134 + (TA)n Simple_repeat Simple_repeat 1 80 0 299 311 33 0 chr5 166101413 166101503 -36984029 - MIR SINE MIR -133 129 37 180 200 0 0 chr5 166101653 166101693 -36983839 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 229 240 60 0 chr5 166101906 166101956 -36983576 + L2 LINE L2 3209 3261 -11 332 321 0 28 chr5 166102800 166102909 -36982623 - L2 LINE L2 -15 3298 3193 2246 99 7 20 chr5 166102978 166103280 -36982252 + AluSp SINE Alu 1 298 -15 428 304 122 25 chr5 166103349 166103586 -36981946 - MIR SINE MIR 0 262 3 351 296 45 40 chr5 166103664 166103840 -36981692 + MIR SINE MIR 86 262 0 343 301 96 22 chr5 166104218 166104354 -36981178 - MER5B DNA MER1_type -30 148 3 562 304 81 28 chr5 166105225 166105472 -36980060 + MIR SINE MIR 2 261 -1 328 266 115 9 chr5 166105479 166105592 -36979940 + L2 LINE L2 3137 3261 -11 1634 156 24 42 chr5 166106461 166106749 -36978783 - AluJb SINE Alu -29 283 1 263 319 121 33 chr5 166106858 166107165 -36978367 + L1MC/D LINE L1 5304 5637 -2171 866 92 14 64 chr5 166107236 166107335 -36978197 - AluSg/x SINE Alu -15 297 205 7909 79 7 10 chr5 166107335 166108408 -36977124 + MER11C LTR ERVK 1 1069 -2 866 92 14 64 chr5 166108408 166108449 -36977083 - AluSg/x SINE Alu -107 205 164 360 155 0 28 chr5 166108549 166108620 -36976912 + MER11B LTR ERVK 1166 1234 -2 1547 99 0 0 chr5 166108622 166108823 -36976709 - AluSx SINE Alu -110 202 2 307 236 109 36 chr5 166108837 166108947 -36976585 + L1MC/D LINE L1 5732 5849 -1959 309 276 46 0 chr5 166109242 166109329 -36976203 - MIR SINE MIR -96 166 76 241 253 35 69 chr5 166110263 166110350 -36975182 + MIR SINE MIR 55 138 -70 724 265 92 0 chr5 166111190 166111386 -36974146 - MIR SINE MIR -33 229 16 424 279 139 0 chr5 166111387 166111552 -36973980 - MER58C DNA MER1_type 0 215 28 186 43 0 0 chr5 166111685 166111708 -36973824 + (TC)n Simple_repeat Simple_repeat 2 24 0 1838 172 14 0 chr5 166111834 166112124 -36973408 - AluJo SINE Alu -18 294 1 338 249 97 30 chr5 166112810 166112975 -36972557 + MER112 DNA MER1_type 79 254 -6 252 258 52 31 chr5 166113122 166113219 -36972313 - L2 LINE L2 -41 3272 3174 469 354 8 15 chr5 166114365 166114495 -36971037 + L2 LINE L2 3144 3272 0 2577 149 5 5 chr5 166115937 166116365 -36969167 - MER41E LTR ERV1 0 512 85 13922 189 67 55 chr5 166116368 166121166 -36964366 + L1PB1 LINE L1 129 5174 -1693 290 78 0 20 chr5 166121166 166121217 -36964315 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 13922 189 67 55 chr5 166121217 166122924 -36962608 + L1PB1 LINE L1 5174 6859 -8 562 165 10 0 chr5 166122927 166123024 -36962508 - MER41E LTR ERV1 -414 98 1 22 56 0 0 chr5 166123306 166123342 -36962190 + AT_rich Low_complexity Low_complexity 1 36 0 593 181 6 82 chr5 166123524 166123695 -36961837 - LTR49 LTR ERV1 -435 160 3 29 60 0 0 chr5 166123805 166123855 -36961677 + AT_rich Low_complexity Low_complexity 1 50 0 2265 177 84 21 chr5 166123926 166124401 -36961131 - MLT1D LTR MaLR 0 505 1 3361 110 38 11 chr5 166124534 166125088 -36960444 - LTR24B LTR ERV1 -7 569 1 355 218 23 46 chr5 166125458 166125545 -36959987 - MLT1H LTR MaLR -15 534 443 773 227 88 37 chr5 166125623 166125896 -36959636 - MLT1H LTR MaLR -259 290 4 1102 299 58 48 chr5 166126524 166127112 -36958420 - L2 LINE L2 -832 2482 1889 1235 157 129 31 chr5 166127112 166127367 -36958165 + AluJo SINE Alu 29 308 -4 2736 121 29 0 chr5 166127378 166127791 -36957741 - MER61B LTR ERV1 0 425 1 505 262 66 0 chr5 166127932 166128115 -36957417 - L1ME3A LINE L1 -305 5865 5671 312 227 8 15 chr5 166129156 166129288 -36956244 + (TA)n Simple_repeat Simple_repeat 2 132 0 277 235 70 17 chr5 166129308 166129423 -36956109 - L1ME4a LINE L1 -28 6093 5973 643 194 74 6 chr5 166129525 166129700 -36955832 - MER53 DNA DNA -1 188 2 2093 152 24 6 chr5 166130369 166130796 -36954736 - LTR23 LTR ERV1 0 467 1 9299 155 17 35 chr5 166130797 166132202 -36953330 - LTR23-int LTR ERV1 0 5698 4811 2219 106 27 0 chr5 166132202 166132494 -36953038 + AluSp SINE Alu 1 300 -13 9299 155 17 35 chr5 166132494 166133342 -36952190 - LTR23-int LTR ERV1 -887 4811 3949 320 135 0 0 chr5 166133349 166133401 -36952131 - MER41A-int LTR ERV1 -929 5402 5351 4664 192 51 34 chr5 166133435 166133886 -36951646 - MER41A-int LTR ERV1 -2341 2782 2340 1579 101 14 0 chr5 166133886 166134094 -36951438 - AluSg/x SINE Alu -18 294 84 4664 192 51 34 chr5 166134094 166134287 -36951245 - MER41A-int LTR ERV1 -2783 2340 2152 2240 115 0 3 chr5 166134287 166134599 -36950933 - AluY SINE Alu 0 311 1 4664 192 51 34 chr5 166134599 166135495 -36950037 - MER41A-int LTR ERV1 -2971 2152 1015 530 240 95 25 chr5 166135499 166135699 -36949833 - MER34C LTR ERV1 -203 382 169 4043 146 11 16 chr5 166135749 166136456 -36949076 - MER50 LTR ERV1 -30 704 1 760 160 47 0 chr5 166136653 166136803 -36948729 - MER41A-int LTR ERV1 -4798 1533 1377 455 158 39 71 chr5 166136904 166137031 -36948501 - MER41A-int LTR ERV1 -4923 1408 1286 304 254 30 0 chr5 166137033 166137100 -36948432 - tRNA-Glu-GAG tRNA tRNA 0 75 7 363 188 47 12 chr5 166137103 166137188 -36948344 - MER41A-int LTR ERV1 -5121 1210 1123 2017 134 3 33 chr5 166137304 166137610 -36947922 + AluSx SINE Alu 1 297 -15 1162 220 36 30 chr5 166138228 166138605 -36946927 - MER41A-int LTR ERV1 -4519 604 75 4119 76 28 0 chr5 166138605 166139144 -36946388 - MER41A LTR ERV1 0 554 1 1162 220 36 30 chr5 166139144 166139206 -36946326 - MER41A-int LTR ERV1 -5048 75 15 1881 154 75 5 chr5 166139220 166139625 -36945907 - LTR23 LTR ERV1 0 467 1 788 260 30 5 chr5 166139775 166139975 -36945557 - MIR SINE MIR -54 208 4 327 261 39 39 chr5 166140025 166140155 -36945377 + L2 LINE L2 3158 3287 -26 1245 255 52 5 chr5 166140340 166140724 -36944808 - L1ME LINE L1 -507 5655 5254 183 269 58 0 chr5 166140739 166140791 -36944741 - L2 LINE L2 -9 3304 3250 40 73 0 0 chr5 166140885 166140967 -36944565 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr5 166141488 166141516 -36944016 + AT_rich Low_complexity Low_complexity 1 28 0 1490 267 111 67 chr5 166141575 166141715 -36943817 - L1ME LINE L1 -930 5216 5084 2042 135 0 13 chr5 166141715 166142026 -36943506 + AluSx SINE Alu 1 307 -5 1490 267 111 67 chr5 166142026 166143277 -36942255 - L1ME LINE L1 -1062 5084 3763 228 135 34 56 chr5 166143289 166143378 -36942154 + (TTTA)n Simple_repeat Simple_repeat 4 90 0 752 321 116 35 chr5 166143409 166143945 -36941587 - L2 LINE L2 -1637 1677 1099 22 35 0 0 chr5 166144276 166144305 -36941227 + AT_rich Low_complexity Low_complexity 1 29 0 326 275 124 22 chr5 166145584 166145762 -36939770 + L2 LINE L2 3112 3307 -6 1452 160 9 112 chr5 166145944 166146275 -36939257 - AluJo SINE Alu -15 297 1 2026 133 3 13 chr5 166146479 166146780 -36938752 - AluSq SINE Alu -15 298 1 466 277 21 7 chr5 166147089 166147230 -36938302 + L1MC4a LINE L1 5475 5617 -2191 1388 209 48 27 chr5 166147335 166147627 -36937905 + AluJo SINE Alu 1 298 -14 681 249 19 9 chr5 166147642 166147855 -36937677 + L1MC4a LINE L1 5671 5885 -1923 4374 193 20 32 chr5 166147861 166148592 -36936940 + L1MB4 LINE L1 4563 5301 -879 2275 122 0 0 chr5 166148592 166148903 -36936629 + AluSq SINE Alu 1 311 -2 4374 193 20 32 chr5 166148903 166149107 -36936425 + L1MB4 LINE L1 5301 5506 -674 1806 162 3 25 chr5 166149107 166149421 -36936111 - AluJo SINE Alu -5 307 1 4374 193 20 32 chr5 166149421 166150132 -36935400 + L1MB4 LINE L1 5506 6180 0 273 230 120 83 chr5 166150151 166150451 -36935081 + L1MC4a LINE L1 6055 6365 -1443 471 199 83 101 chr5 166150743 166151019 -36934513 + L1MC5 LINE L1 6767 7037 -924 1330 175 4 21 chr5 166151025 166151259 -36934273 + AluJo SINE Alu 76 305 -7 1166 208 40 113 chr5 166151273 166151696 -36933836 + L1MC5 LINE L1 7056 7432 -529 2354 92 10 0 chr5 166151696 166152001 -36933531 - AluSg SINE Alu -2 308 1 1166 208 40 113 chr5 166152001 166152125 -36933407 + L1MC5 LINE L1 7432 7563 -398 334 312 109 44 chr5 166152661 166152863 -36932669 - L1MC4a LINE L1 -1972 5836 5602 1626 203 0 36 chr5 166152863 166153169 -36932363 + AluJb SINE Alu 5 299 -13 334 312 109 44 chr5 166153169 166153306 -36932226 - L1MC4a LINE L1 -2206 5602 5475 2496 63 0 0 chr5 166153516 166153818 -36931714 - AluY SINE Alu -9 302 1 441 235 85 61 chr5 166154318 166154565 -36930967 + MER112 DNA MER1_type 4 256 0 198 323 15 15 chr5 166154862 166154927 -36930605 - L2 LINE L2 -35 3237 3173 331 311 105 40 chr5 166155036 166155458 -36930074 - L2 LINE L2 -243 3070 2573 192 345 0 0 chr5 166157657 166157715 -36927817 + L2 LINE L2 3002 3059 -213 316 304 112 0 chr5 166157992 166158117 -36927415 - MIR SINE MIR -6 256 118 337 183 106 58 chr5 166158546 166158650 -36926882 - MIR SINE MIR -70 192 84 601 263 82 52 chr5 166159232 166159464 -36926068 - MIR SINE MIR -3 259 21 27 49 0 0 chr5 166159670 166159711 -36925821 + AT_rich Low_complexity Low_complexity 1 41 0 760 154 0 0 chr5 166159712 166159829 -36925703 - AluJb SINE Alu -195 117 1 22 0 0 0 chr5 166159919 166159941 -36925591 + AT_rich Low_complexity Low_complexity 1 22 0 329 275 25 25 chr5 166161105 166161225 -36924307 + MER94 DNA DNA 6 125 -9 965 129 0 0 chr5 166161263 166161395 -36924137 - FLAM_C SINE Alu -11 132 1 346 284 85 34 chr5 166161977 166162153 -36923379 - MIR SINE MIR -14 248 64 248 285 86 65 chr5 166163776 166163962 -36921570 - L2 LINE L2 -4 3309 3120 1094 303 153 4 chr5 166164400 166164909 -36920623 - MLT1E LTR MaLR 0 593 9 189 287 103 35 chr5 166165725 166165812 -36919720 - MIR SINE MIR -149 113 21 1714 168 48 89 chr5 166165939 166166420 -36919112 + MLT1C LTR MaLR 4 464 -3 602 147 28 0 chr5 166167584 166167693 -36917839 + Tigger5 DNA MER2_type 2212 2323 0 411 289 57 1 chr5 166167853 166168020 -36917512 + MIR SINE MIR 41 215 -47 207 278 215 21 chr5 166168281 166168425 -36917107 + MIR SINE MIR 79 250 -12 360 370 128 0 chr5 166168475 166168678 -36916854 - L3 LINE CR1 -1 1576 1348 403 327 19 0 chr5 166168875 166169031 -36916501 + MIR SINE MIR 56 214 -48 378 269 45 52 chr5 166169212 166169242 -36916290 - MIR SINE MIR -18 244 215 1538 148 116 0 chr5 166169242 166169545 -36915987 - MER44D DNA MER2_type 0 609 2 378 269 45 52 chr5 166169545 166169648 -36915884 - MIR SINE MIR -47 215 112 444 303 74 23 chr5 166169664 166170146 -36915386 - MLT1L LTR MaLR -13 602 106 351 213 0 0 chr5 166170155 166170235 -36915297 + (TG)n Simple_repeat Simple_repeat 2 81 0 263 308 0 51 chr5 166170319 166170397 -36915135 - MIR SINE MIR -178 84 11 218 309 132 0 chr5 166170943 166171011 -36914521 - MIR SINE MIR -84 124 48 415 244 15 59 chr5 166171949 166172084 -36913448 - L2 LINE L2 0 3313 3185 366 297 193 11 chr5 166172076 166172423 -36913109 - L2 LINE L2 -2230 1084 675 * 2445 133 0 3 chr5 166172475 166172837 -36912695 + THE1B LTR MaLR 2 362 -2 7647 124 21 36 chr5 166172842 166174362 -36911170 + THE1B-int LTR MaLR 4 1507 -73 1514 117 45 4 chr5 166174362 166174609 -36910923 - MER41B LTR ERV1 -247 388 132 266 170 0 38 chr5 166174635 166174688 -36910844 - MER41C LTR ERV1 -503 51 1 180 172 202 81 chr5 166175185 166175284 -36910248 + L2 LINE L2 3203 3313 0 701 228 44 0 chr5 166175864 166176022 -36909510 - FAM SINE Alu -10 165 1 332 167 0 0 chr5 166176118 166176178 -36909354 + L1MA9 LINE L1 6066 6125 -187 226 338 40 20 chr5 166176846 166176994 -36908538 - L2 LINE L2 -212 3060 2910 417 292 155 12 chr5 166177171 166177339 -36908193 + MIR SINE MIR 1 192 -70 622 236 65 25 chr5 166177695 166177970 -36907562 - MER113 DNA MER1_type? -75 446 161 295 309 41 0 chr5 166178004 166178101 -36907431 + MIR SINE MIR 151 251 -11 739 172 0 0 chr5 166178953 166179069 -36906463 + FLAM_A SINE Alu 1 116 -17 408 349 41 14 chr5 166179104 166179250 -36906282 - MER91A DNA MER1_type -11 185 36 424 284 27 147 chr5 166179544 166179836 -36905696 + MIR SINE MIR 4 260 -2 1011 174 8 81 chr5 166181869 166182104 -36903428 + MER20 DNA MER1_type 2 219 0 836 191 33 55 chr5 166182819 166183002 -36902530 - MER5A DNA MER1_type -7 182 4 299 317 21 56 chr5 166183109 166183251 -36902281 + MER5B DNA MER1_type 17 153 -25 674 288 105 0 chr5 166183261 166183480 -36902052 - MIR SINE MIR -7 255 14 570 280 42 18 chr5 166184094 166184262 -36901270 - MIR3 SINE MIR -16 192 21 2137 116 0 3 chr5 166184291 166184583 -36900949 + AluSc SINE Alu 1 291 -18 21 0 0 0 chr5 166184583 166184604 -36900928 + AT_rich Low_complexity Low_complexity 1 21 0 2258 98 7 20 chr5 166184823 166185129 -36900403 - AluSx SINE Alu -10 302 1 183 324 138 69 chr5 166185676 166185821 -36899711 - MER5A DNA MER1_type -29 160 6 468 287 13 32 chr5 166185871 166186028 -36899504 - L2 LINE L2 0 3313 3160 2332 86 0 0 chr5 166186028 166186335 -36899197 + AluSc SINE Alu 1 307 0 954 189 13 0 chr5 166186528 166186687 -36898845 + FRAM SINE Alu 1 160 -16 21 0 0 0 chr5 166186687 166186708 -36898824 + AT_rich Low_complexity Low_complexity 1 21 0 301 346 19 0 chr5 166187425 166187532 -36898000 + MER5B DNA MER1_type 65 173 -5 2344 96 0 13 chr5 166187941 166188254 -36897278 + AluSc SINE Alu 1 309 0 198 103 0 0 chr5 166188466 166188495 -36897037 + (GA)n Simple_repeat Simple_repeat 2 30 0 25 31 0 0 chr5 166189264 166189296 -36896236 + AT_rich Low_complexity Low_complexity 1 32 0 2445 54 3 16 chr5 166189854 166190168 -36895364 + AluY SINE Alu 1 310 -1 300 231 0 0 chr5 166190200 166190278 -36895254 + (TA)n Simple_repeat Simple_repeat 1 78 0 560 288 70 28 chr5 166190445 166190660 -36894872 - MIR SINE MIR 0 262 39 258 308 87 0 chr5 166190711 166190815 -36894717 - MIR SINE MIR -3 259 147 1161 140 34 14 chr5 166191126 166191333 -36894199 + MER46A DNA MER2_type 26 236 0 616 185 58 32 chr5 166191417 166191606 -36893926 + L1MA8 LINE L1 6092 6285 -6 235 200 15 0 chr5 166191837 166191902 -36893630 - L1M LINE L1 -805 5359 5294 1014 291 44 21 chr5 166192604 166193155 -36892377 + L1MD2 LINE L1 5350 5793 -377 2056 170 0 3 chr5 166194629 166194984 -36890548 + AluJb SINE Alu 1 354 0 334 289 72 0 chr5 166195025 166195108 -36890424 - MIR SINE MIR -161 101 13 385 308 19 0 chr5 166195126 166195230 -36890302 - L2 LINE L2 -1 3271 3166 1420 242 44 6 chr5 166196683 166197043 -36888489 - MLT1A2 LTR MaLR 0 374 1 1896 207 14 35 chr5 166197043 166197263 -36888269 - MLT1A2-int LTR MaLR 0 1735 1524 1460 164 31 41 chr5 166197263 166197590 -36887942 + AluJb SINE Alu 1 324 0 1896 207 14 35 chr5 166197590 166197800 -36887732 - MLT1A2-int LTR MaLR -211 1524 1311 439 248 0 0 chr5 166197950 166198055 -36887477 - MLT1A2-int LTR MaLR -955 780 676 1739 179 121 21 chr5 166198193 166198395 -36887137 - MLT1A2-int LTR MaLR -718 653 472 2221 128 3 0 chr5 166198395 166198701 -36886831 + AluSp SINE Alu 1 307 -6 1739 179 121 21 chr5 166198701 166198985 -36886547 - MLT1A2-int LTR MaLR -899 472 3 1328 251 30 6 chr5 166198985 166199348 -36886184 - MLT1A2 LTR MaLR -2 372 1 264 59 0 0 chr5 166200495 166200529 -36885003 + (CA)n Simple_repeat Simple_repeat 2 35 0 208 277 0 31 chr5 166200984 166201049 -36884483 + L2 LINE L2 3023 3085 -228 1623 191 3 0 chr5 166201534 166201828 -36883704 - AluJb SINE Alu -17 295 1 2513 93 125 2 chr5 166201870 166202269 -36883263 - LTR7 LTR ERV1 -2 448 1 500 328 8 8 chr5 166202954 166203088 -36882444 + L2 LINE L2 3139 3272 0 356 258 141 8 chr5 166203900 166204028 -36881504 - MIR SINE MIR -16 246 102 203 324 231 0 chr5 166204250 166204358 -36881174 - L2 LINE L2 -1 3271 3139 225 239 14 42 chr5 166204909 166204980 -36880552 + Charlie8 DNA MER1_type 123 191 -2226 1670 158 39 11 chr5 166205547 166205826 -36879706 + AluJo SINE Alu 11 297 -15 477 339 45 11 chr5 166206167 166206344 -36879188 - MER5A DNA MER1_type -3 186 4 219 371 12 84 chr5 166207502 166207669 -36877863 - L2 LINE L2 0 3272 3118 356 255 78 69 chr5 166208101 166208332 -36877200 + L2 LINE L2 2806 3038 -275 364 209 0 12 chr5 166208332 166208418 -36877114 - L1 LINE L1 -846 5300 5216 * 563 214 30 0 chr5 166208411 166208542 -36876990 + L1 LINE L1 3620 3754 -2392 742 228 100 3 chr5 166208559 166208849 -36876683 - L1M4c LINE L1 -3093 3551 3234 * 1131 186 47 61 chr5 166208827 166209246 -36876286 - L1M4c LINE L1 -5320 1222 840 201 74 0 0 chr5 166209618 166209645 -36875887 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 339 328 0 34 chr5 166209734 166209853 -36875679 - L2 LINE L2 -201 3071 2957 2546 147 9 72 chr5 166210234 166210804 -36874728 - L1P LINE L1 -1320 4826 4293 269 161 0 54 chr5 166210812 166210868 -36874664 - MER5B DNA MER1_type -125 53 1 330 236 90 0 chr5 166210927 166211016 -36874516 + MIR SINE MIR 115 211 -51 9695 150 36 28 chr5 166212373 166212882 -36872650 - L1M4c LINE L1 -4431 1953 1450 2047 157 0 0 chr5 166212882 166213182 -36872350 + AluSx SINE Alu 1 300 -12 9695 150 36 28 chr5 166213182 166213386 -36872146 - L1M4c LINE L1 -4934 1450 1249 1668 79 31 18 chr5 166213386 166213613 -36871919 + MER30 DNA MER1_type 1 230 0 9695 150 36 28 chr5 166213613 166214822 -36870710 - L1M4c LINE L1 -5135 1249 13 26 30 0 0 chr5 166215097 166215130 -36870402 + AT_rich Low_complexity Low_complexity 1 33 0 386 280 15 68 chr5 166215652 166215784 -36869748 + MIR3 SINE MIR 38 162 -46 31 44 0 0 chr5 166215830 166215875 -36869657 + AT_rich Low_complexity Low_complexity 1 45 0 514 301 74 0 chr5 166216091 166216254 -36869278 - MER63A DNA MER1_type -19 191 17 1896 164 10 3 chr5 166216667 166216960 -36868572 - AluSx SINE Alu -17 295 1 204 40 0 0 chr5 166219400 166219425 -36866107 + (TG)n Simple_repeat Simple_repeat 2 26 0 660 275 117 68 chr5 166220879 166221131 -36864401 + MLT1K LTR MaLR 100 379 -209 2049 100 4 7 chr5 166221131 166221410 -36864122 + AluSx SINE Alu 24 301 -11 660 275 117 68 chr5 166221410 166221542 -36863990 + MLT1K LTR MaLR 379 503 -85 275 333 36 7 chr5 166221713 166221851 -36863681 + MER103 DNA DNA 2 143 -23 545 239 56 0 chr5 166225934 166226076 -36859456 - MIR SINE MIR -32 230 81 180 321 0 0 chr5 166228088 166228141 -36857391 + L3 LINE CR1 650 702 -875 256 214 57 0 chr5 166228335 166228405 -36857127 - L1MC4 LINE L1 -1355 6687 6614 25 63 0 38 chr5 166228422 166228501 -36857031 + AT_rich Low_complexity Low_complexity 1 76 0 259 144 52 0 chr5 166228529 166228626 -36856906 + (TA)n Simple_repeat Simple_repeat 2 103 0 315 300 0 0 chr5 166228651 166228741 -36856791 + (TA)n Simple_repeat Simple_repeat 1 90 0 22 0 0 0 chr5 166228927 166228949 -36856583 + AT_rich Low_complexity Low_complexity 1 22 0 382 308 81 41 chr5 166229506 166229727 -36855805 + L3 LINE CR1 1328 1557 -20 581 306 151 9 chr5 166229843 166230062 -36855470 + MIR SINE MIR 13 262 0 901 273 81 30 chr5 166230138 166230508 -36855024 + MLT1I LTR MaLR 7 395 -14 436 274 30 12 chr5 166231139 166231307 -36854225 + L1ME4a LINE L1 5947 6117 -4 456 264 8 8 chr5 166232453 166232574 -36852958 + MIR3 SINE MIR 47 167 -41 468 297 45 0 chr5 166232678 166232833 -36852699 + MIR SINE MIR 76 237 -25 2849 7 0 0 chr5 166233863 166234168 -36851364 - AluY SINE Alu -6 305 1 540 298 26 0 chr5 166234542 166234693 -36850839 + MER117 DNA MER1_type 4 158 -39 327 306 139 11 chr5 166234951 166235131 -36850401 + MIR SINE MIR 47 249 -13 648 269 134 47 chr5 166236409 166236811 -36848721 + MLT1K LTR MaLR 150 586 -2 301 278 0 0 chr5 166236901 166236973 -36848559 + MIR SINE MIR 79 150 -112 324 287 111 0 chr5 166237365 166237473 -36848059 + MIR SINE MIR 24 143 -119 750 275 29 29 chr5 166237894 166238138 -36847394 + MIR SINE MIR 16 259 -3 204 240 60 0 chr5 166239085 166239135 -36846397 + MIR SINE MIR 83 135 -127 21 0 0 0 chr5 166239289 166239310 -36846222 + AT_rich Low_complexity Low_complexity 1 21 0 255 330 132 0 chr5 166240679 166240785 -36844747 - L2 LINE L2 -5 3267 3148 430 281 50 38 chr5 166240788 166240948 -36844584 + MER5A DNA MER1_type 4 165 -24 197 315 185 23 chr5 166241788 166241918 -36843614 - MER5B DNA MER1_type -21 157 7 367 211 189 0 chr5 166242079 166242169 -36843363 + L2 LINE L2 3204 3310 -3 538 272 56 17 chr5 166242999 166243179 -36842353 + MIR SINE MIR 64 250 -12 226 192 96 0 chr5 166243342 166243394 -36842138 + L2 LINE L2 3216 3272 0 231 302 206 53 chr5 166243866 166244055 -36841477 + L2 LINE L2 3030 3247 -25 397 273 76 8 chr5 166244438 166244570 -36840962 - MER117 DNA MER1_type -8 189 49 728 249 28 6 chr5 166245554 166245735 -36839797 + MIR SINE MIR 66 250 -12 289 303 15 61 chr5 166246789 166246921 -36838611 + MIR SINE MIR 19 144 -118 459 258 226 0 chr5 166246921 166247076 -36838456 + MIR SINE MIR 2 191 -71 500 265 27 102 chr5 166247564 166247770 -36837762 + MIR SINE MIR 69 260 -2 582 316 51 20 chr5 166248151 166248546 -36836986 + L1ME4a LINE L1 5556 5962 -159 825 259 65 5 chr5 166251660 166251876 -36833656 + MIR SINE MIR 33 261 -1 250 220 68 161 chr5 166252216 166252334 -36833198 - L3 LINE CR1 -9 1568 1462 335 297 59 8 chr5 166252339 166252457 -36833075 + MER117 DNA MER1_type 2 125 -72 * 347 125 0 0 chr5 166252448 166252496 -36833036 - 5S rRNA rRNA -71 50 3 9416 97 2 5 chr5 166252496 166254528 -36831004 + L1PA7 LINE L1 4100 6146 -8 285 98 0 0 chr5 166254836 166254877 -36830655 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 524 278 28 28 chr5 166254897 166255073 -36830459 + MIR SINE MIR 86 261 -1 1739 135 10 51 chr5 166255219 166255546 -36829986 - AluSx SINE Alu 0 315 1 510 46 0 0 chr5 166257517 166257582 -36827950 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 402 358 20 6 chr5 166257733 166257939 -36827593 - L2 LINE L2 -312 3001 2794 2080 75 85 14 chr5 166260186 166260500 -36825032 + L1PA10 LINE L1 5833 6167 0 267 279 9 36 chr5 166260882 166260993 -36824539 + MIR SINE MIR 70 177 -85 260 336 44 8 chr5 166261122 166261268 -36824264 - MIR3 SINE MIR -66 142 2 1534 221 82 25 chr5 166262325 166262774 -36822758 + MER113 DNA MER1_type? 3 477 -44 346 283 26 26 chr5 166263160 166263273 -36822259 + MIR SINE MIR 35 147 -61 267 218 55 0 chr5 166263302 166263357 -36822175 + MIR SINE MIR 131 188 -74 2359 76 7 0 chr5 166263393 166263684 -36821848 + AluSc SINE Alu 1 293 -16 1850 166 27 58 chr5 166264328 166264739 -36820793 + L1MC2 LINE L1 5938 6335 -9 392 363 37 5 chr5 166264915 166265105 -36820427 - MIR SINE MIR -4 258 63 833 277 81 13 chr5 166265405 166265715 -36819817 - LTR33 LTR ERVL -11 510 180 671 281 82 0 chr5 166265820 166266016 -36819516 - LTR33 LTR ERVL -309 212 1 192 241 69 0 chr5 166267576 166267634 -36817898 + MIR SINE MIR 126 187 -75 210 286 57 0 chr5 166268715 166268785 -36816747 - L2 LINE L2 -48 3224 3151 685 316 174 20 chr5 166268872 166269559 -36815973 - L2 LINE L2 0 3313 2514 2394 77 0 3 chr5 166269796 166270096 -36815436 + AluY SINE Alu 1 299 -12 289 265 73 42 chr5 166270650 166270771 -36814761 + MIR SINE MIR 41 166 -42 2139 155 21 13 chr5 166270955 166271330 -36814202 - MLT1B LTR MaLR -2 388 11 328 327 20 33 chr5 166271409 166271559 -36813973 + MIR3 SINE MIR 37 184 -24 239 327 48 10 chr5 166272222 166272326 -36813206 + MIR3 SINE MIR 7 114 -94 348 253 90 12 chr5 166272602 166272768 -36812764 + L1ME4a LINE L1 5942 6120 -1 4120 53 39 18 chr5 166272891 166273403 -36812129 + L1PA8A LINE L1 5607 6129 -2 539 261 115 60 chr5 166273950 166274184 -36811348 + MIR SINE MIR 16 262 0 380 262 58 0 chr5 166275269 166275372 -36810160 - L2 LINE L2 0 3272 3164 475 258 55 23 chr5 166275951 166276112 -36809420 - MIR3 SINE MIR -27 181 19 445 212 82 20 chr5 166276775 166276921 -36808611 + MIR SINE MIR 50 204 -58 1735 106 116 11 chr5 166277365 166277640 -36807892 + AluSg1 SINE Alu 1 304 -5 204 324 128 45 chr5 166279373 166279552 -36805980 + MIR SINE MIR 31 224 -38 468 319 32 42 chr5 166279894 166280110 -36805422 + MIR SINE MIR 49 262 0 299 85 21 0 chr5 166281587 166281634 -36803898 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr5 166282215 166282247 -36803285 + (CA)n Simple_repeat Simple_repeat 2 33 0 414 0 0 0 chr5 166282658 166282704 -36802828 + (CA)n Simple_repeat Simple_repeat 1 46 0 25 91 0 0 chr5 166283616 166283671 -36801861 + GC_rich Low_complexity Low_complexity 1 55 0 207 100 0 0 chr5 166283883 166283913 -36801619 + (T)n Simple_repeat Simple_repeat 1 30 0 225 0 0 0 chr5 166285826 166285851 -36799681 + (TG)n Simple_repeat Simple_repeat 2 26 0 706 273 45 58 chr5 166286317 166286497 -36799035 + L2 LINE L2 2345 2521 -793 2423 94 0 0 chr5 166286497 166286806 -36798726 - AluSq SINE Alu -4 309 1 706 273 45 58 chr5 166286806 166286936 -36798596 + L2 LINE L2 2521 2651 -663 285 29 0 0 chr5 166286937 166286971 -36798561 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 192 320 90 10 chr5 166286978 166287078 -36798454 - L2 LINE L2 -8 3305 3198 500 281 152 0 chr5 166287118 166287328 -36798204 + L2 LINE L2 3069 3310 -3 1389 294 114 26 chr5 166287602 166287986 -36797546 - L2 LINE L2 -1640 1674 1325 4639 55 5 14 chr5 166287986 166288545 -36796987 + MER41A LTR ERV1 1 554 0 1389 294 114 26 chr5 166288545 166288807 -36796725 - L2 LINE L2 -1989 1325 971 26 30 0 0 chr5 166288883 166288916 -36796616 + AT_rich Low_complexity Low_complexity 1 33 0 2270 91 0 3 chr5 166289744 166290040 -36795492 + AluY SINE Alu 1 295 -16 1036 176 55 83 chr5 166290339 166290628 -36794904 + MLT1D LTR MaLR 23 303 -202 3259 311 84 39 chr5 166290667 166290865 -36794667 + HERV16 LTR ERVL 1718 1906 -3858 2037 170 70 122 chr5 166290865 166291511 -36794021 + LTR9 LTR ERV1 1 612 0 3259 311 84 39 chr5 166291511 166294706 -36790826 + HERV16 LTR ERVL 1906 5323 -441 1666 203 16 13 chr5 166294832 166295143 -36790389 + AluJo SINE Alu 1 312 0 2121 111 7 0 chr5 166295226 166295515 -36790017 - AluSx SINE Alu -21 291 1 855 295 30 33 chr5 166295562 166295894 -36789638 + LTR16A LTR ERVL 120 450 0 437 313 84 6 chr5 166295928 166296107 -36789425 + Charlie8 DNA MER1_type 66 258 -2159 1759 189 38 54 chr5 166297655 166298026 -36787506 - MLT1A1 LTR MaLR 0 365 1 859 41 0 0 chr5 166298648 166298746 -36786786 - L1PA5 LINE L1 -8 6146 6049 282 303 96 22 chr5 166299264 166299391 -36786141 + MIR SINE MIR 30 160 -48 270 340 10 0 chr5 166299680 166299783 -36785749 + L2 LINE L2 2231 2334 -980 1217 277 63 39 chr5 166299805 166300220 -36785312 + LTR16A LTR ERVL 16 440 -10 217 224 133 31 chr5 166300345 166300443 -36785089 + L2 LINE L2 2929 3036 -236 816 325 58 36 chr5 166300461 166300956 -36784576 + L2 LINE L2 2742 3247 -25 290 138 17 0 chr5 166300984 166301042 -36784490 + (CATA)n Simple_repeat Simple_repeat 2 60 0 253 223 165 33 chr5 166301943 166302064 -36783468 - MIR3 SINE MIR -42 166 30 186 267 173 7 chr5 166302290 166302428 -36783104 + MIR SINE MIR 38 197 -65 21 0 0 0 chr5 166303011 166303032 -36782500 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 166303517 166303541 -36781991 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 21 0 0 0 chr5 166303752 166303773 -36781759 + AT_rich Low_complexity Low_complexity 1 21 0 340 338 55 23 chr5 166303917 166304136 -36781396 + MIR SINE MIR 26 251 -11 487 266 155 19 chr5 166304290 166304497 -36781035 - MIR SINE MIR -27 235 1 303 291 13 0 chr5 166304536 166304615 -36780917 + MIR SINE MIR 170 249 -13 738 126 63 14 chr5 166304678 166304821 -36780711 - L1MB7 LINE L1 0 6184 6035 1398 186 0 12 chr5 166304869 166305127 -36780405 + L1MC/D LINE L1 5501 5755 -487 688 260 20 5 chr5 166305125 166305321 -36780211 + L1MD3 LINE L1 7787 7985 -10 * 705 224 13 7 chr5 166305882 166306034 -36779498 - MIR SINE MIR -49 213 61 24 77 0 0 chr5 166306084 166306136 -36779396 + AT_rich Low_complexity Low_complexity 1 52 0 1613 273 73 68 chr5 166306347 166307478 -36778054 + L1MEd LINE L1 143 1321 -4941 2997 3 0 0 chr5 166307478 166307796 -36777736 - AluYb8 SINE Alu 0 318 1 1613 273 73 68 chr5 166307796 166307864 -36777668 + L1MEd LINE L1 1321 1387 -4875 344 200 47 108 chr5 166308157 166308312 -36777220 - MLT1J LTR MaLR -317 163 26 272 298 58 0 chr5 166308846 166308950 -36776582 + L2 LINE L2 3204 3313 0 474 278 116 33 chr5 166309014 166309255 -36776277 - MIR SINE MIR 0 262 2 351 198 198 9 chr5 166309770 166309886 -36775646 - MIR SINE MIR -12 250 113 518 279 112 60 chr5 166309909 166310434 -36775098 + LTR33A LTR ERVL 21 521 -2 280 229 16 0 chr5 166310441 166310502 -36775030 - MIR SINE MIR -154 108 47 2183 103 3 0 chr5 166310618 166310936 -36774596 - AluSp SINE Alu 0 319 1 501 309 17 17 chr5 166311035 166311210 -36774322 + MIR SINE MIR 14 188 -74 1830 229 15 37 chr5 166311268 166311469 -36774063 - LTR40c LTR ERVL 0 465 261 1817 201 96 6 chr5 166311469 166311832 -36773700 + MSTD LTR MaLR 1 396 0 1830 229 15 37 chr5 166311832 166312088 -36773444 - LTR40c LTR ERVL -204 261 18 246 316 18 71 chr5 166312161 166312330 -36773202 - MIR3 SINE MIR -57 151 15 2024 137 60 41 chr5 166312650 166313016 -36772516 - THE1C LTR MaLR 0 375 3 255 294 105 1 chr5 166313039 166313134 -36772398 - MIR3 SINE MIR -47 161 63 282 258 11 54 chr5 166313365 166313458 -36772074 - L2 LINE L2 0 3313 3225 208 296 42 0 chr5 166313485 166313556 -36771976 - L2 LINE L2 0 3313 3240 294 276 133 0 chr5 166313758 166313856 -36771676 + MIR SINE MIR 119 229 -33 201 39 0 0 chr5 166313926 166313952 -36771580 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 189 311 175 19 chr5 166315154 166315257 -36770275 + MIR SINE MIR 11 129 -133 365 266 52 32 chr5 166315305 166315459 -36770073 - L1ME4a LINE L1 -253 5868 5712 367 290 127 25 chr5 166315610 166315827 -36769705 + MIR SINE MIR 1 227 -35 1628 152 18 0 chr5 166315828 166316111 -36769421 + L1MB4 LINE L1 5705 5992 -182 494 191 28 28 chr5 166316114 166316255 -36769277 + L1MB4 LINE L1 6039 6179 -1 194 205 26 0 chr5 166316256 166316295 -36769237 + L2 LINE L2 3262 3301 -12 353 267 11 11 chr5 166316306 166316396 -36769136 + MIR3 SINE MIR 106 195 -13 1065 209 31 40 chr5 166317446 166317671 -36767861 + MER58A DNA MER1_type 1 223 -1 1229 187 10 0 chr5 166318432 166318641 -36766891 + AluJb SINE Alu 84 294 -18 2287 118 0 0 chr5 166318647 166318960 -36766572 + AluSq SINE Alu 1 313 0 417 287 153 8 chr5 166319278 166319487 -36766045 + MIR SINE MIR 16 251 -11 758 224 73 36 chr5 166319693 166319885 -36765647 + L1PA16 LINE L1 5968 6166 0 10919 200 59 35 chr5 166320465 166323205 -36762327 + L1MC1 LINE L1 27 2699 -3727 1539 215 10 13 chr5 166323205 166323516 -36762016 + AluJo SINE Alu 1 310 -2 10919 200 59 35 chr5 166323516 166323825 -36761707 + L1MC1 LINE L1 2699 2999 -3427 1773 86 0 0 chr5 166323825 166324045 -36761487 + AluSq SINE Alu 1 220 -93 10919 200 59 35 chr5 166324045 166324498 -36761034 + L1MC1 LINE L1 2999 3439 -2987 2255 61 0 47 chr5 166324498 166324826 -36760706 + AluY SINE Alu 1 314 0 10919 200 59 35 chr5 166324826 166325171 -36760361 + L1MC1 LINE L1 3439 3971 -2455 * 12033 31 0 1 chr5 166325160 166327325 -36758207 + L1PA4 LINE L1 3990 6152 -3 5535 210 39 61 chr5 166327329 166327851 -36757681 + L1MC1 LINE L1 3961 4493 -2120 6495 75 65 22 chr5 166327851 166329020 -36756512 - L1PA13 LINE L1 -1 6162 4970 5535 210 39 61 chr5 166329020 166330246 -36755286 + L1MC1 LINE L1 4493 5743 -870 2323 107 0 0 chr5 166330246 166330545 -36754987 + AluSx SINE Alu 1 299 -13 5535 210 39 61 chr5 166330545 166331393 -36754139 + L1MC1 LINE L1 5743 6430 -183 2096 130 27 0 chr5 166331393 166331693 -36753839 - AluSx SINE Alu -4 308 1 5535 210 39 61 chr5 166331693 166331856 -36753676 + L1MC1 LINE L1 6430 6595 -18 1516 172 107 3 chr5 166331887 166332213 -36753319 - MLT1A1 LTR MaLR 0 365 6 282 95 0 0 chr5 166332284 166332326 -36753206 + (CA)n Simple_repeat Simple_repeat 1 42 0 2544 56 0 0 chr5 166332486 166332790 -36752742 - AluY SINE Alu -7 304 1 1410 190 69 0 chr5 166333232 166333506 -36752026 - AluJb SINE Alu -19 293 1 370 333 47 16 chr5 166333656 166333785 -36751747 - MIR3 SINE MIR -36 172 40 2247 102 0 3 chr5 166335156 166335450 -36750082 - AluSx SINE Alu -19 293 1 314 336 145 11 chr5 166335495 166335757 -36749775 + L3 LINE CR1 337 633 -944 383 316 17 17 chr5 166335836 166335953 -36749579 + MIR SINE MIR 20 136 -126 627 313 111 60 chr5 166336020 166336604 -36748928 + L3 LINE CR1 674 1287 -290 380 336 26 0 chr5 166336650 166336766 -36748766 - MIR SINE MIR -112 150 32 401 261 97 15 chr5 166336778 166336912 -36748620 + MLT1I LTR MaLR 11 155 -254 480 211 23 45 chr5 166336999 166337132 -36748400 + MLT1I LTR MaLR 280 409 0 662 293 72 5 chr5 166337173 166337381 -36748151 + L3 LINE CR1 1282 1503 -74 259 193 181 24 chr5 166337407 166337490 -36748042 - L2 LINE L2 -14 3258 3163 25 31 0 0 chr5 166339451 166339483 -36746049 + GC_rich Low_complexity Low_complexity 1 32 0 270 0 0 0 chr5 166340650 166340680 -36744852 + (CA)n Simple_repeat Simple_repeat 1 30 0 254 348 89 0 chr5 166341081 166341193 -36744339 - L2 LINE L2 0 3272 3151 351 282 107 0 chr5 166341302 166341405 -36744127 + L2 LINE L2 3199 3312 -1 359 231 0 0 chr5 166341437 166341515 -36744017 - MIR SINE MIR -10 252 175 1942 129 0 11 chr5 166341738 166342018 -36743514 + AluSx SINE Alu 1 277 -35 189 0 0 0 chr5 166342024 166342045 -36743487 + (CAA)n Simple_repeat Simple_repeat 2 22 0 268 310 39 23 chr5 166342218 166342311 -36743221 - MIR SINE MIR -15 247 150 1583 182 3 26 chr5 166342311 166342613 -36742919 - AluJb SINE Alu -17 295 1 268 310 39 23 chr5 166342613 166342648 -36742884 - MIR SINE MIR -112 150 117 404 341 49 24 chr5 166343114 166343319 -36742213 - MIR SINE MIR -35 227 18 2270 93 0 3 chr5 166343964 166344255 -36741277 - AluSx SINE Alu -18 294 5 279 324 0 0 chr5 166344524 166344595 -36740937 + MIR SINE MIR 185 255 -7 352 280 77 0 chr5 166344976 166345144 -36740388 + L1ME4a LINE L1 5939 6119 -2 21 0 0 0 chr5 166345958 166345979 -36739553 + AT_rich Low_complexity Low_complexity 1 21 0 231 114 0 0 chr5 166346038 166346073 -36739459 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 339 365 50 1 chr5 166347228 166347369 -36738163 + MIR SINE MIR 4 152 -64 30 69 0 0 chr5 166347717 166347775 -36737757 + AT_rich Low_complexity Low_complexity 1 58 0 34 55 0 0 chr5 166348225 166348280 -36737252 + AT_rich Low_complexity Low_complexity 1 55 0 278 265 0 71 chr5 166349256 166349354 -36736178 - L2 LINE L2 0 3313 3223 699 255 22 16 chr5 166349635 166349819 -36735713 + MER58B DNA MER1_type 157 341 0 2401 91 3 3 chr5 166349965 166350272 -36735260 - AluSx SINE Alu -5 307 1 205 273 0 0 chr5 166350361 166350405 -36735127 - MER5A DNA MER1_type -139 50 7 1168 162 32 19 chr5 166350976 166351192 -36734340 + AluJo SINE Alu 84 302 -10 753 227 63 24 chr5 166352207 166352414 -36733118 + MIR SINE MIR 36 250 -12 201 318 45 45 chr5 166352913 166353023 -36732509 - MIR SINE MIR -62 146 37 202 143 0 24 chr5 166353899 166353941 -36731591 + (TA)n Simple_repeat Simple_repeat 1 41 0 1859 164 23 3 chr5 166354003 166354308 -36731224 + AluJo SINE Alu 1 311 -1 2031 199 60 7 chr5 166355296 166355728 -36729804 - LTR32 LTR ERVL 0 471 17 462 296 130 18 chr5 166355756 166355925 -36729607 - MIR SINE MIR -69 193 6 1341 207 80 18 chr5 166355999 166356400 -36729132 - LTR37A LTR ERV1 0 426 1 256 234 0 0 chr5 166357387 166357451 -36728081 + MER92C LTR ERV1 491 554 0 2201 167 59 66 chr5 166358285 166358861 -36726671 + L1MB7 LINE L1 5603 6174 -10 2017 119 39 42 chr5 166359068 166359380 -36726152 + AluSx SINE Alu 1 311 -1 2095 146 3 0 chr5 166359563 166359858 -36725674 + AluSq SINE Alu 1 296 -17 296 284 0 0 chr5 166359927 166359994 -36725538 + MIR3 SINE MIR 94 160 -48 409 265 66 0 chr5 166360006 166360172 -36725360 - MER113 DNA MER1_type? -343 178 2 616 283 68 40 chr5 166360604 166360756 -36724776 - MIR SINE MIR -3 259 94 537 228 26 9 chr5 166360756 166360941 -36724591 + FLAM_A SINE Alu 1 187 0 616 283 68 40 chr5 166360941 166361037 -36724495 - MIR SINE MIR -168 94 2 447 274 9 0 chr5 166362167 166362280 -36723252 + MER81 DNA DNA 1 114 0 221 313 50 40 chr5 166362339 166362438 -36723094 + MER5B DNA MER1_type 72 171 -7 21 82 0 0 chr5 166362513 166362562 -36722970 + AT_rich Low_complexity Low_complexity 1 49 0 472 330 106 12 chr5 166362888 166363209 -36722323 - L1ME4a LINE L1 -5 6116 5766 260 241 74 9 chr5 166363542 166363650 -36721882 - L1ME4a LINE L1 -206 5915 5801 515 222 118 52 chr5 166363956 166364109 -36721423 + MIR SINE MIR 68 230 -32 673 329 12 4 chr5 166364278 166364518 -36721014 + MIR SINE MIR 8 249 -13 372 343 35 23 chr5 166364787 166364959 -36720573 + MIR3 SINE MIR 20 193 -15 2297 76 0 7 chr5 166365002 166365292 -36720240 + AluSg1 SINE Alu 1 288 -21 671 330 52 4 chr5 166365837 166366070 -36719462 - MIR SINE MIR -1 261 18 2251 107 0 13 chr5 166367423 166367732 -36717800 - AluSx SINE Alu -7 305 1 247 330 20 15 chr5 166367789 166367992 -36717540 - L1ME4a LINE L1 -294 5827 5624 721 249 57 11 chr5 166368462 166368639 -36716893 + L2 LINE L2 1843 2027 -1287 2037 108 0 28 chr5 166368666 166368973 -36716559 + AluSx SINE Alu 8 306 0 1024 287 100 0 chr5 166368976 166369377 -36716155 - LTR33A LTR ERVL -28 495 55 2196 138 0 3 chr5 166369470 166369781 -36715751 - AluSx SINE Alu -2 310 1 446 264 24 8 chr5 166369788 166369913 -36715619 + L2 LINE L2 2043 2169 -1145 1268 194 43 47 chr5 166370093 166370372 -36715160 + AluJo SINE Alu 1 278 -34 533 282 17 17 chr5 166370399 166370573 -36714959 + LTR16A LTR ERVL 54 227 -223 199 195 0 0 chr5 166370654 166370695 -36714837 + L2 LINE L2 3273 3313 0 1920 149 33 3 chr5 166370761 166371063 -36714469 - AluSx SINE Alu -1 311 1 276 261 14 0 chr5 166371129 166371198 -36714334 + MIR SINE MIR 180 249 -13 232 230 18 80 chr5 166371678 166371791 -36713741 - L2 LINE L2 -55 3258 3153 1496 180 79 4 chr5 166371953 166372231 -36713301 - AluJo SINE Alu -11 301 3 253 249 16 57 chr5 166372864 166373013 -36712519 - L1ME4a LINE L1 -161 5960 5824 2251 136 0 0 chr5 166373013 166373323 -36712209 + AluSq SINE Alu 1 310 -3 253 249 16 57 chr5 166373323 166373486 -36712046 - L1ME4a LINE L1 -297 5824 5656 642 310 35 26 chr5 166373511 166373743 -36711789 - MIR SINE MIR 0 262 29 424 314 55 43 chr5 166374503 166374758 -36710774 - MLT1J2 LTR MaLR -21 429 172 303 290 11 0 chr5 166374771 166374864 -36710668 - MLT1J1 LTR MaLR -348 98 5 276 100 0 0 chr5 166375415 166375455 -36710077 + (TG)n Simple_repeat Simple_repeat 2 41 0 533 236 40 20 chr5 166376170 166376318 -36709214 + MIR SINE MIR 84 234 -28 2421 71 7 0 chr5 166376386 166376680 -36708852 + AluY SINE Alu 1 296 -15 182 171 24 0 chr5 166376703 166376744 -36708788 + (CA)n Simple_repeat Simple_repeat 2 43 0 371 314 61 58 chr5 166376770 166377063 -36708469 - L1MC4a LINE L1 -1801 6007 5714 218 337 119 0 chr5 166377172 166377273 -36708259 - MIR SINE MIR -64 144 32 2186 96 7 0 chr5 166377289 166377570 -36707962 + AluSp SINE Alu 1 283 -30 181 0 0 0 chr5 166377570 166377590 -36707942 + (TAAA)n Simple_repeat Simple_repeat 1 148 0 210 274 0 19 chr5 166377656 166377725 -36707807 - MIR SINE MIR -136 126 60 546 127 64 9 chr5 166378302 166378412 -36707120 - L1MB7 LINE L1 -1 6183 6068 1256 243 29 34 chr5 166378440 166378841 -36706691 - MER39 LTR ERV1 0 666 275 554 163 67 74 chr5 166378921 166379056 -36706476 - L1MB8 LINE L1 -101 6077 5944 1985 135 7 0 chr5 166379065 166379354 -36706178 - AluSx SINE Alu -11 301 11 509 96 78 17 chr5 166379357 166379472 -36706060 + CT-rich Low_complexity Low_complexity 4 125 0 3270 171 77 23 chr5 166379558 166380293 -36705239 - L1MB3 LINE L1 -221 5962 5162 1998 129 3 0 chr5 166380293 166380580 -36704952 - AluSx SINE Alu -13 299 12 3270 171 77 23 chr5 166380580 166380857 -36704675 - L1MB3 LINE L1 -1021 5162 4902 502 356 59 22 chr5 166380886 166381209 -36704323 - LTR16C LTR ERVL 0 491 157 2306 141 141 5 chr5 166381309 166381686 -36703846 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr5 166382136 166382171 -36703361 + AT_rich Low_complexity Low_complexity 1 35 0 2083 53 0 0 chr5 166382171 166382416 -36703116 - AluY SINE Alu -28 283 39 1154 288 97 46 chr5 166382416 166383121 -36702411 - L2 LINE L2 -10 3303 2563 2185 124 0 0 chr5 166383213 166383512 -36702020 - AluSx SINE Alu -7 305 7 2169 131 0 13 chr5 166383678 166383991 -36701541 + AluSx SINE Alu 1 309 -3 278 288 55 0 chr5 166385017 166385090 -36700442 - L2 LINE L2 -2 3270 3194 225 360 58 14 chr5 166385131 166385270 -36700262 - MIR SINE MIR 0 262 118 2039 100 65 0 chr5 166385420 166385711 -36699821 + AluSx SINE Alu 3 312 0 2386 103 0 0 chr5 166385726 166386038 -36699494 + AluSx SINE Alu 1 312 0 252 0 0 0 chr5 166386519 166386547 -36698985 + (TC)n Simple_repeat Simple_repeat 2 29 0 317 235 0 82 chr5 166386549 166386647 -36698885 - L1MC4 LINE L1 -1339 6703 6614 2023 102 15 0 chr5 166386910 166387174 -36698358 - AluSp SINE Alu -45 268 1 250 329 57 44 chr5 166387509 166387737 -36697795 + L2 LINE L2 3082 3312 -1 379 329 87 7 chr5 166388315 166388464 -36697068 - LTR33 LTR ERVL -337 184 24 264 322 11 0 chr5 166388570 166388660 -36696872 - MIR SINE MIR -132 130 40 257 283 119 19 chr5 166389213 166389372 -36696160 - L1ME4a LINE L1 -16 6105 5931 1708 161 4 0 chr5 166389377 166389631 -36695901 + AluJb SINE Alu 33 287 -25 543 259 152 6 chr5 166389824 166389982 -36695550 - MER5A DNA MER1_type -6 183 3 22 35 0 0 chr5 166390787 166390816 -36694716 + AT_rich Low_complexity Low_complexity 1 29 0 285 98 0 0 chr5 166391288 166391329 -36694203 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 306 73 0 0 chr5 166391634 166391675 -36693857 + (TG)n Simple_repeat Simple_repeat 2 42 0 2166 122 0 10 chr5 166391751 166392054 -36693478 - AluSx SINE Alu -10 302 3 1110 204 0 24 chr5 166392061 166392272 -36693260 - AluJb SINE Alu -21 291 86 1636 190 59 0 chr5 166392877 166393047 -36692485 - AluJo SINE Alu -5 307 112 183 42 0 0 chr5 166393047 166393071 -36692461 + (TTTTA)n Simple_repeat Simple_repeat 5 28 0 1636 190 59 0 chr5 166393071 166393190 -36692342 - AluJo SINE Alu -200 112 1 337 250 96 29 chr5 166393538 166393674 -36691858 - MIR SINE MIR -67 195 51 254 339 108 16 chr5 166394502 166394688 -36690844 + MIR SINE MIR 11 213 -49 22 0 0 0 chr5 166394888 166394910 -36690622 + AT_rich Low_complexity Low_complexity 1 22 0 1760 61 5 0 chr5 166395036 166395248 -36690284 - AluY SINE Alu -17 294 82 252 226 191 0 chr5 166395297 166395381 -36690151 - MER103 DNA DNA 0 166 67 2339 110 0 0 chr5 166396068 166396376 -36689156 - AluSq SINE Alu -5 308 1 2371 109 3 0 chr5 166396688 166397000 -36688532 - AluSp SINE Alu 0 313 1 228 163 0 0 chr5 166397070 166397113 -36688419 + (TG)n Simple_repeat Simple_repeat 2 44 0 1874 95 19 23 chr5 166397221 166397483 -36688049 + AluSc SINE Alu 27 287 -22 410 336 36 36 chr5 166398086 166398306 -36687226 - MIR SINE MIR -12 250 31 245 279 23 0 chr5 166398430 166398516 -36687016 + MIR SINE MIR 129 216 -46 409 136 0 0 chr5 166399402 166399484 -36686048 - Alu SINE Alu 0 312 235 2045 183 51 75 chr5 166399598 166399801 -36685731 - L1MD2 LINE L1 -320 6039 5833 1942 141 20 0 chr5 166399801 166399974 -36685558 - AluSq SINE Alu -9 304 121 225 0 0 0 chr5 166399974 166399999 -36685533 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1942 141 20 0 chr5 166399999 166400123 -36685409 - AluSq SINE Alu -192 121 1 2045 183 51 75 chr5 166400123 166400401 -36685131 - L1MD2 LINE L1 -526 5833 5550 1762 176 0 16 chr5 166400401 166400707 -36684825 + AluJb SINE Alu 1 301 -11 2045 183 51 75 chr5 166400707 166400858 -36684674 - L1MD2 LINE L1 -809 5550 5397 2156 107 7 13 chr5 166400858 166401158 -36684374 - AluSq SINE Alu -15 298 1 2045 183 51 75 chr5 166401158 166401588 -36683944 - L1MD2 LINE L1 -962 5397 4842 2344 67 27 3 chr5 166401706 166402004 -36683528 - AluY SINE Alu -6 305 1 369 259 119 7 chr5 166402327 166402470 -36683062 + MIR SINE MIR 104 262 0 204 333 83 17 chr5 166402771 166402891 -36682641 + MIR SINE MIR 58 185 -77 22 35 0 0 chr5 166403016 166403045 -36682487 + AT_rich Low_complexity Low_complexity 1 29 0 776 250 88 7 chr5 166403415 166403711 -36681821 + HAL1b LINE L1 1026 1345 -3 603 239 75 20 chr5 166403683 166403884 -36681648 - L1MD3 LINE L1 0 7995 7784 * 270 266 33 22 chr5 166404064 166404198 -36681334 - MER63 DNA MER1_type -1 1059 682 435 310 39 16 chr5 166405132 166405261 -36680271 + MIR SINE MIR 8 139 -123 571 293 80 44 chr5 166405292 166405517 -36680015 - MIR SINE MIR -17 245 13 258 154 35 83 chr5 166405583 166405700 -36679832 + (TTATA)n Simple_repeat Simple_repeat 2 110 -52 2054 125 0 3 chr5 166405700 166405989 -36679543 - AluSx SINE Alu -24 288 1 258 154 35 83 chr5 166405989 166406040 -36679492 + (TTATA)n Simple_repeat Simple_repeat 110 162 0 190 294 43 54 chr5 166406047 166406139 -36679393 + MIR SINE MIR 19 109 -99 2086 109 3 7 chr5 166406156 166406441 -36679091 - AluSq SINE Alu -25 288 5 1549 134 106 34 chr5 166406444 166406736 -36678796 - AluSq SINE Alu 0 313 1 206 200 0 0 chr5 166406769 166406809 -36678723 + L2 LINE L2 3265 3304 -9 201 121 0 0 chr5 166406809 166406842 -36678690 + (A)n Simple_repeat Simple_repeat 1 33 0 437 288 98 46 chr5 166407370 166407592 -36677940 - MIR SINE MIR -13 249 19 25 51 0 0 chr5 166407979 166408018 -36677514 + AT_rich Low_complexity Low_complexity 1 39 0 195 217 0 0 chr5 166408607 166408667 -36676865 + A-rich Low_complexity Low_complexity 1 60 0 291 267 67 0 chr5 166408821 166408911 -36676621 - L2 LINE L2 -32 3240 3145 2312 81 3 0 chr5 166408941 166409256 -36676276 - AluSp SINE Alu 0 316 1 2220 109 0 16 chr5 166409384 166409696 -36675836 + AluSg SINE Alu 1 307 -3 4817 165 62 46 chr5 166409886 166410941 -36674591 + MER11C LTR ERVK 1 1071 0 310 224 176 57 chr5 166411668 166411878 -36673654 - LTR37B LTR ERV1 -24 444 210 930 205 13 0 chr5 166412225 166412381 -36673151 + FRAM SINE Alu 1 158 -8 2058 104 54 0 chr5 166412383 166412662 -36672870 + AluSp SINE Alu 1 294 -19 1858 148 3 20 chr5 166413811 166414115 -36671417 - AluJo SINE Alu -13 299 1 1273 210 33 27 chr5 166414133 166414433 -36671099 - AluJo SINE Alu -10 302 1 195 231 0 0 chr5 166414519 166414558 -36670974 + L2 LINE L2 3178 3216 -97 1838 125 10 37 chr5 166414958 166415253 -36670279 + AluSx SINE Alu 5 291 -21 21 36 0 0 chr5 166415366 166415394 -36670138 + AT_rich Low_complexity Low_complexity 1 28 0 655 174 0 0 chr5 166416616 166416725 -36668807 - FLAM_A SINE Alu -2 140 32 191 308 55 11 chr5 166416847 166416938 -36668594 - L3 LINE CR1 -1 1576 1482 282 29 0 0 chr5 166417279 166417314 -36668218 + (TG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr5 166417349 166417375 -36668157 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 166417809 166417833 -36667699 + AT_rich Low_complexity Low_complexity 1 24 0 2313 113 0 0 chr5 166419028 166419329 -36666203 + AluSx SINE Alu 1 301 -11 535 274 71 42 chr5 166469984 166470005 -36615527 + MIR SINE MIR 14 33 -229 2423 93 0 3 chr5 166470005 166470315 -36615217 + AluSq SINE Alu 1 309 -4 535 274 71 42 chr5 166470315 166470505 -36615027 + MIR SINE MIR 33 231 -31 360 364 68 23 chr5 166471249 166471469 -36614063 + MIR SINE MIR 20 249 -13 560 255 5 75 chr5 166471489 166471701 -36613831 - L2 LINE L2 0 3313 3117 931 278 138 22 chr5 166472051 166472498 -36613034 - L2 LINE L2 -287 3026 2524 41 66 0 0 chr5 166472515 166472591 -36612941 + AT_rich Low_complexity Low_complexity 1 76 0 2030 106 0 17 chr5 166472703 166472995 -36612537 - AluSq SINE Alu -26 287 1 355 271 21 22 chr5 166473041 166473176 -36612356 - MIR SINE MIR -84 124 45 531 170 4 17 chr5 166473419 166473653 -36611879 + (TA)n Simple_repeat Simple_repeat 1 230 0 297 68 0 0 chr5 166473661 166473705 -36611827 + (A)n Simple_repeat Simple_repeat 1 44 0 1062 89 0 0 chr5 166473705 166473874 -36611658 + (TA)n Simple_repeat Simple_repeat 2 170 0 999 236 0 0 chr5 166473874 166474082 -36611450 - MER6B DNA MER2_type -2 208 1 290 261 68 62 chr5 166474288 166474449 -36611083 - Charlie8 DNA MER1_type -2255 162 1 220 318 159 16 chr5 166474773 166474899 -36610633 + MIR3 SINE MIR 49 192 -16 1158 132 9 114 chr5 166475238 166475571 -36609961 - L1PA10 LINE L1 -19 6149 5852 638 180 0 7 chr5 166475723 166475862 -36609670 - L1PA6 LINE L1 -4 6150 6013 385 260 92 58 chr5 166476516 166476712 -36608820 - MIR SINE MIR -40 222 15 306 225 25 25 chr5 166477191 166477271 -36608261 + (CATA)n Simple_repeat Simple_repeat 4 83 0 1954 147 46 3 chr5 166477335 166477681 -36607851 + MER46B DNA MER2_type 1 236 0 6130 91 15 5 chr5 166477717 166478395 -36607137 + L1PB1 LINE L1 5105 5797 -354 195 42 0 0 chr5 166478395 166478419 -36607113 + (CATA)n Simple_repeat Simple_repeat 2 25 0 6130 91 15 5 chr5 166478419 166478778 -36606754 + L1PB1 LINE L1 5797 6151 0 22 0 0 0 chr5 166478933 166478955 -36606577 + AT_rich Low_complexity Low_complexity 1 22 0 355 300 30 0 chr5 166479084 166479184 -36606348 + MER5A DNA MER1_type 10 112 -77 484 245 14 14 chr5 166479754 166479893 -36605639 - Charlie8 DNA MER1_type -2184 233 95 209 338 0 26 chr5 166479990 166480067 -36605465 + L2 LINE L2 3160 3234 -38 235 342 125 8 chr5 166480226 166480346 -36605186 - MIR3 SINE MIR -14 194 61 189 0 0 0 chr5 166480589 166480610 -36604922 + (TA)n Simple_repeat Simple_repeat 1 21 0 480 261 28 108 chr5 166480804 166481053 -36604479 + MIR SINE MIR 15 243 -19 529 328 115 24 chr5 166481633 166482068 -36603464 + L2 LINE L2 2797 3276 -37 193 328 227 16 chr5 166482314 166482561 -36602971 - L2 LINE L2 -164 3108 2810 264 341 66 0 chr5 166483083 166483174 -36602358 - L2 LINE L2 -30 3242 3146 414 357 27 30 chr5 166483485 166483748 -36601784 + MIR SINE MIR 1 262 0 270 335 52 66 chr5 166483997 166484209 -36601323 - L2 LINE L2 -213 3059 2851 968 174 10 5 chr5 166484763 166484958 -36600574 - L1MB3 LINE L1 -20 6163 5968 2089 114 3 20 chr5 166485731 166486030 -36599502 - AluSg SINE Alu -16 294 1 315 221 47 35 chr5 166486394 166486414 -36599118 + MIR SINE MIR 176 194 -68 2162 117 7 0 chr5 166486414 166486713 -36598819 + AluSq SINE Alu 1 301 -12 315 221 47 35 chr5 166486713 166486778 -36598754 + MIR SINE MIR 194 262 0 324 285 80 7 chr5 166486796 166486933 -36598599 - L3b LINE CR1 -246 1337 1191 2250 92 0 0 chr5 166487903 166488187 -36597345 - AluSg SINE Alu 0 310 27 2143 105 20 3 chr5 166488185 166488481 -36597051 - AluSx SINE Alu -11 301 1 * 431 98 15 2 chr5 166489655 166489729 -36595803 - L1MB7 LINE L1 -43 6135 6064 690 179 28 78 chr5 166489729 166489908 -36595624 + MER20 DNA MER1_type 49 218 -1 185 348 0 43 chr5 166490428 166490497 -36595035 + L2 LINE L2 3204 3269 -3 819 332 93 36 chr5 166490520 166491326 -36594206 + L2 LINE L2 2460 3313 0 209 237 66 66 chr5 166491887 166491963 -36593569 + L2 LINE L2 3197 3272 0 221 360 74 16 chr5 166492083 166492272 -36593260 - L2 LINE L2 -778 2536 2337 847 304 16 8 chr5 166493326 166493573 -36591959 + MIR SINE MIR 1 249 -13 258 340 93 25 chr5 166494333 166494495 -36591037 - L3 LINE CR1 -2 1575 1403 2181 114 3 16 chr5 166494574 166494891 -36590641 + AluSq SINE Alu 1 313 0 188 205 0 0 chr5 166494894 166494933 -36590599 - L3 LINE CR1 -301 1276 1238 426 282 15 22 chr5 166495904 166496062 -36589470 + MIR SINE MIR 42 196 -66 1680 167 0 65 chr5 166496212 166496535 -36588997 - AluJb SINE Alu -10 302 1 324 256 13 0 chr5 166497623 166497701 -36587831 + L2 LINE L2 3222 3300 -13 24 0 0 0 chr5 166497766 166497790 -36587742 + AT_rich Low_complexity Low_complexity 1 24 0 2338 84 3 0 chr5 166497988 166498284 -36587248 - AluSp SINE Alu -14 299 3 3577 156 18 10 chr5 166498369 166499049 -36586483 - L1MB2 LINE L1 -7 6164 5480 1626 174 33 0 chr5 166499061 166499331 -36586201 - AluJo SINE Alu -33 279 1 2230 110 3 0 chr5 166499944 166500252 -36585280 - AluSg1 SINE Alu 0 309 1 401 274 9 26 chr5 166500307 166500420 -36585112 - L2 LINE L2 0 3313 3203 256 355 102 6 chr5 166500425 166500591 -36584941 - L2 LINE L2 -220 3052 2871 410 355 35 0 chr5 166500862 166501003 -36584529 + MIR SINE MIR 9 154 -108 216 0 0 0 chr5 166501084 166501108 -36584424 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2137 108 3 3 chr5 166501112 166501400 -36584132 - AluSx SINE Alu -24 288 1 423 319 18 71 chr5 166501776 166501885 -36583647 + MIR SINE MIR 49 141 -121 623 175 0 0 chr5 166501885 166501999 -36583533 + L1PB4 LINE L1 6043 6156 0 423 319 18 71 chr5 166501999 166502115 -36583417 + MIR SINE MIR 141 262 0 206 263 131 10 chr5 166502347 166502446 -36583086 + L2 LINE L2 3153 3263 -9 607 271 21 0 chr5 166502577 166502717 -36582815 + MIR SINE MIR 19 161 -101 293 272 71 144 chr5 166503132 166503514 -36582018 - L2 LINE L2 -1 3271 2918 215 111 44 22 chr5 166503516 166503561 -36581971 + GA-rich Low_complexity Low_complexity 1 46 0 255 237 13 0 chr5 166503727 166503803 -36581729 - L1MC5 LINE L1 -195 7766 7690 198 0 0 0 chr5 166503803 166503825 -36581707 + (A)n Simple_repeat Simple_repeat 1 22 0 1041 193 0 11 chr5 166504130 166504306 -36581226 - FAM SINE Alu -1 174 1 27 0 0 0 chr5 166504622 166504649 -36580883 + AT_rich Low_complexity Low_complexity 1 27 0 393 308 33 0 chr5 166505995 166506115 -36579417 + MIR SINE MIR 47 170 -92 254 306 32 0 chr5 166507078 166507140 -36578392 + L3 LINE CR1 1509 1572 -5 25 31 0 0 chr5 166508499 166508531 -36577001 + AT_rich Low_complexity Low_complexity 1 32 0 401 309 180 5 chr5 166508547 166508764 -36576768 + MIR SINE MIR 6 260 -2 2166 112 20 0 chr5 166509815 166510110 -36575422 - AluSq SINE Alu -12 301 1 1259 116 0 0 chr5 166511145 166511309 -36574223 + AluSp SINE Alu 131 294 -19 207 0 0 0 chr5 166511673 166511696 -36573836 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1999 128 7 3 chr5 166511699 166511981 -36573551 - AluSq SINE Alu -30 283 1 205 206 16 16 chr5 166512019 166512082 -36573450 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 2120 104 0 0 chr5 166513549 166513827 -36571705 - AluSx SINE Alu -1 311 34 306 252 8 79 chr5 166514211 166514338 -36571194 - L1M4 LINE L1 -2956 3190 3073 24 53 0 0 chr5 166514492 166514530 -36571002 + AT_rich Low_complexity Low_complexity 1 38 0 602 253 13 7 chr5 166514953 166515103 -36570429 + MIR SINE MIR 102 252 -10 448 339 86 6 chr5 166515172 166515346 -36570186 + MIR SINE MIR 19 206 -56 357 355 12 23 chr5 166516318 166516490 -36569042 - MER5A DNA MER1_type -7 182 13 188 285 118 62 chr5 166518046 166518190 -36567342 - L3 LINE CR1 -61 1516 1365 3304 81 25 2 chr5 166518853 166519296 -36566236 + MLT2A2 LTR ERVL 1 453 0 284 270 0 0 chr5 166519735 166519798 -36565734 - L2 LINE L2 -5 3308 3246 801 205 153 0 chr5 166521792 166521982 -36563550 - MER20 DNA MER1_type 0 219 1 22 35 0 0 chr5 166522550 166522579 -36562953 + AT_rich Low_complexity Low_complexity 1 29 0 291 203 0 0 chr5 166522738 166522812 -36562720 + (TA)n Simple_repeat Simple_repeat 1 74 0 1035 227 152 48 chr5 166522815 166523506 -36562026 + L1ME3A LINE L1 2291 3053 -3093 1523 251 81 36 chr5 166523665 166524418 -36561114 + L1ME3A LINE L1 5360 6148 -22 876 227 97 4 chr5 166525438 166525676 -36559856 - MIR SINE MIR -1 261 2 21 36 0 0 chr5 166525756 166525784 -36559748 + AT_rich Low_complexity Low_complexity 1 28 0 344 311 47 26 chr5 166527322 166527512 -36558020 - MER117 DNA MER1_type 0 197 4 623 318 74 0 chr5 166528188 166528430 -36557102 - MIR SINE MIR -1 261 2 26418 132 14 21 chr5 166528822 166533117 -36552415 - L1PA8 LINE L1 -10 6477 2200 2344 57 0 3 chr5 166533117 166533430 -36552102 + AluY SINE Alu 1 312 0 26418 132 14 21 chr5 166533430 166535607 -36549925 - L1PA8 LINE L1 -4287 2200 10 438 250 182 20 chr5 166537814 166537962 -36547570 + MER5A DNA MER1_type 11 182 -7 183 80 0 0 chr5 166538152 166538177 -36547355 + (TTTTC)n Simple_repeat Simple_repeat 3 27 0 228 35 0 0 chr5 166538281 166538310 -36547222 + (CA)n Simple_repeat Simple_repeat 2 30 0 289 256 26 26 chr5 166538619 166538697 -36546835 - MER5A DNA MER1_type -79 110 33 182 61 0 30 chr5 166538729 166538762 -36546770 + (TCTCTG)n Simple_repeat Simple_repeat 4 35 0 2331 109 0 3 chr5 166538822 166539135 -36546397 + AluSx SINE Alu 1 312 0 222 320 0 13 chr5 166539184 166539262 -36546270 + MIR3 SINE MIR 123 199 -9 3326 90 18 0 chr5 166539299 166539744 -36545788 + MLT2A2 LTR ERVL 1 453 0 863 182 30 57 chr5 166540054 166540318 -36545214 + Charlie5 DNA MER1_type 2368 2624 0 1276 163 28 0 chr5 166541237 166541452 -36544080 + MER58A DNA MER1_type 3 223 -1 418 243 33 53 chr5 166542576 166542728 -36542804 - MIR SINE MIR -1 261 113 359 273 53 13 chr5 166542858 166543008 -36542524 + MIR SINE MIR 100 255 -7 27 62 0 0 chr5 166543017 166543065 -36542467 + AT_rich Low_complexity Low_complexity 1 48 0 234 324 20 20 chr5 166543163 166543265 -36542267 + L3 LINE CR1 1380 1481 -96 271 323 30 34 chr5 166544060 166544207 -36541325 + MIR SINE MIR 41 185 -68 211 171 24 0 chr5 166544670 166544711 -36540821 - L2 LINE L2 -5 3308 3267 455 198 66 8 chr5 166544712 166544833 -36540699 + MIR SINE MIR 122 249 -13 428 268 16 24 chr5 166544838 166544965 -36540567 - MIR SINE MIR -81 181 56 328 305 33 26 chr5 166545925 166546076 -36539456 + MER5A DNA MER1_type 36 187 -2 258 274 44 89 chr5 166546762 166546897 -36538635 - MIR SINE MIR -24 238 110 589 275 201 20 chr5 166546923 166547475 -36538057 - L2 LINE L2 -4 3309 2645 217 129 0 0 chr5 166547473 166547504 -36538028 - MIR SINE MIR -161 101 71 * 233 254 83 89 chr5 166548115 166548284 -36537248 + L2 LINE L2 2579 2746 -568 210 143 0 0 chr5 166548561 166548596 -36536936 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 269 68 23 0 chr5 166548679 166548723 -36536809 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 186 372 44 28 chr5 166548803 166548983 -36536549 - L2 LINE L2 -206 3066 2884 248 361 110 14 chr5 166549079 166549298 -36536234 - L2 LINE L2 -529 2785 2546 458 338 10 37 chr5 166550040 166550414 -36535118 + L2 LINE L2 2217 2540 -774 283 330 5 91 chr5 166550766 166550963 -36534569 - MIR SINE MIR -81 181 2 1923 160 9 80 chr5 166551606 166552068 -36533464 - L1MB8 LINE L1 -2 6176 5748 2375 59 0 10 chr5 166552171 166552476 -36533056 + AluY SINE Alu 1 302 -9 532 271 45 68 chr5 166553142 166553363 -36532169 + MIR SINE MIR 15 230 -32 2809 133 48 42 chr5 166553817 166554122 -36531410 - L1MA8 LINE L1 -1 6290 5978 2210 114 3 0 chr5 166554122 166554421 -36531111 - AluSg SINE Alu -10 300 1 2809 133 48 42 chr5 166554421 166554693 -36530839 - L1MA8 LINE L1 -313 5978 5709 995 130 26 0 chr5 166554790 166554944 -36530588 + L1MA1 LINE L1 6145 6302 0 360 0 0 0 chr5 166555079 166555119 -36530413 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1878 151 0 0 chr5 166555121 166555400 -36530132 - AluSx SINE Alu -33 279 1 221 360 57 11 chr5 166555488 166555663 -36529869 - L2 LINE L2 -32 3281 3099 612 251 118 19 chr5 166555704 166555915 -36529617 - MIR SINE MIR 0 262 31 599 278 78 0 chr5 166556082 166556262 -36529270 + MIR SINE MIR 12 205 -57 188 305 85 0 chr5 166557371 166557430 -36528102 - L2 LINE L2 -223 3049 2986 251 228 59 69 chr5 166557456 166557557 -36527975 + L2 LINE L2 2934 3033 -239 2017 146 10 3 chr5 166557879 166558188 -36527344 + AluJb SINE Alu 1 311 -1 521 347 63 52 chr5 166558188 166558613 -36526919 - L2 LINE L2 -282 3031 2607 2141 127 0 7 chr5 166559327 166559626 -36525906 + AluSx SINE Alu 1 297 -15 342 0 0 0 chr5 166560416 166560454 -36525078 + (CA)n Simple_repeat Simple_repeat 2 39 0 256 320 80 0 chr5 166560475 166560575 -36524957 + L2 LINE L2 3206 3313 0 190 389 59 32 chr5 166560674 166561013 -36524519 - L2 LINE L2 -404 2910 2563 324 330 82 33 chr5 166561089 166561271 -36524261 - MIR SINE MIR -14 248 58 431 314 72 0 chr5 166562557 166562710 -36522822 + L2 LINE L2 3141 3304 -9 217 263 38 0 chr5 166563292 166563372 -36522160 - MIR SINE MIR -1 261 179 252 325 24 24 chr5 166563506 166563632 -36521900 - L2 LINE L2 -159 3113 2988 372 271 176 43 chr5 166563887 166564097 -36521435 - MIR SINE MIR 0 262 25 265 378 20 14 chr5 166564666 166564814 -36520718 - MIR SINE MIR -109 153 5 936 254 93 54 chr5 166564917 166565630 -36519902 - L2 LINE L2 -9 3304 2557 221 348 80 0 chr5 166565768 166565880 -36519652 - L2 LINE L2 -16 3297 3177 490 262 101 42 chr5 166565923 166566091 -36519441 - L2 LINE L2 -3 3310 3133 312 306 57 99 chr5 166566124 166566187 -36519345 + L1MC4a LINE L1 5701 5765 -2043 1283 186 138 15 chr5 166566187 166566304 -36519228 + AluJb SINE Alu 1 102 -200 189 0 0 0 chr5 166566304 166566325 -36519207 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1283 186 138 15 chr5 166566325 166566476 -36519056 + AluJb SINE Alu 102 302 0 312 306 57 99 chr5 166566476 166566659 -36518873 + L1MC4a LINE L1 5765 5934 -1874 414 57 0 0 chr5 166566659 166566712 -36518820 + (TA)n Simple_repeat Simple_repeat 1 53 0 312 306 57 99 chr5 166566712 166566778 -36518754 + L1MC4a LINE L1 5934 6001 -1807 243 286 211 3 chr5 166567609 166567736 -36517796 - MIR SINE MIR -62 146 19 210 343 121 18 chr5 166568010 166568144 -36517388 + L2 LINE L2 2883 3002 -311 1808 183 131 19 chr5 166568144 166568564 -36516968 + MLT1C LTR MaLR 1 467 0 210 343 121 18 chr5 166568564 166568740 -36516792 + L2 LINE L2 3002 3230 -83 585 243 133 44 chr5 166569279 166569505 -36516027 + MIR SINE MIR 15 260 -2 252 0 0 0 chr5 166571770 166571798 -36513734 + (TG)n Simple_repeat Simple_repeat 1 28 0 270 73 0 0 chr5 166571798 166571839 -36513693 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 2497 112 27 0 chr5 166572329 166572694 -36512838 + THE1C LTR MaLR 1 375 0 9816 117 34 10 chr5 166572694 166573210 -36512322 + THE1C-int LTR MaLR 1 503 -1077 2691 99 0 0 chr5 166573210 166573563 -36511969 - THE1A LTR MaLR 0 355 3 9816 117 34 10 chr5 166573563 166574588 -36510944 + THE1C-int LTR MaLR 503 1580 0 2537 127 11 0 chr5 166574588 166574959 -36510573 + THE1C LTR MaLR 1 375 0 313 253 0 0 chr5 166576156 166576231 -36509301 + L1MEd LINE L1 602 676 -5443 480 295 42 17 chr5 166576289 166576645 -36508887 + L1MEd LINE L1 786 1150 -4969 181 314 0 0 chr5 166577130 166577181 -36508351 - L2 LINE L2 -485 2829 2779 673 198 0 0 chr5 166577525 166577651 -36507881 + MLT1A1 LTR MaLR 1 126 -239 1122 199 31 0 chr5 166577812 166578038 -36507494 + MLT1A1 LTR MaLR 133 365 0 284 284 105 0 chr5 166578052 166578147 -36507385 + MLT1K LTR MaLR 17 121 -467 265 318 262 0 chr5 166578241 166578348 -36507184 + MLT1K LTR MaLR 238 372 -216 1121 67 30 6 chr5 166578362 166578527 -36507005 + L1PB1 LINE L1 5932 6100 -51 536 119 34 17 chr5 166578532 166578650 -36506882 + GA-rich Low_complexity Low_complexity 3 122 0 1153 96 11 0 chr5 166578652 166578830 -36506702 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 282 315 23 15 chr5 166578884 166579014 -36506518 + MLT1K LTR MaLR 458 588 0 399 286 31 0 chr5 166579101 166579199 -36506333 - MIR SINE MIR -66 142 42 3354 116 55 148 chr5 166579234 166579712 -36505820 - Tigger3b DNA MER2_type -1797 1232 711 848 167 15 0 chr5 166579712 166579844 -36505688 - FLAM_C SINE Alu -9 134 1 3354 116 55 148 chr5 166579844 166580568 -36504964 - Tigger3b DNA MER2_type -2318 711 18 1400 154 131 12 chr5 166581440 166581699 -36503833 + AluSg1 SINE Alu 1 290 -19 222 211 123 123 chr5 166581709 166581823 -36503709 + MIR3 SINE MIR 82 195 -13 567 276 119 28 chr5 166581986 166582272 -36503260 + L1MC/D LINE L1 5496 5807 -2001 486 217 0 0 chr5 166582521 166582604 -36502928 - FRAM/FAM SINE Alu -95 81 1 371 143 330 36 chr5 166582775 166582887 -36502645 - MER46A DNA MER2_type -89 147 3 * 926 126 77 38 chr5 166582887 166582983 -36502549 + MER46A DNA MER2_type 134 236 0 298 362 43 7 chr5 166582983 166583124 -36502408 - MIR SINE MIR -114 148 3 270 267 42 25 chr5 166583342 166583462 -36502070 + MER113 DNA MER1_type? 1 122 -399 381 294 50 32 chr5 166584396 166584571 -36500961 - MER5A DNA MER1_type 0 189 1 238 356 6 6 chr5 166585402 166585582 -36499950 + (TA)n Simple_repeat Simple_repeat 1 180 0 2146 116 0 7 chr5 166585688 166585989 -36499543 + AluSg1 SINE Alu 1 299 -10 207 369 77 56 chr5 166586029 166586224 -36499308 + L2 LINE L2 3074 3272 0 * 255 419 7 0 chr5 166586220 166586368 -36499164 + MIR3 SINE MIR 37 185 -23 597 259 31 54 chr5 166586565 166586789 -36498743 + MIR SINE MIR 18 236 -26 196 403 89 0 chr5 166587449 166587573 -36497959 - L2 LINE L2 0 3313 3179 360 329 88 0 chr5 166587654 166587791 -36497741 + MIR SINE MIR 93 241 -21 1712 132 0 0 chr5 166587798 166588041 -36497491 - AluSq SINE Alu -24 289 47 325 288 114 15 chr5 166589475 166589607 -36495925 - MIR SINE MIR 0 262 118 342 383 91 0 chr5 166590045 166590298 -36495234 + L1MEd LINE L1 607 882 -5323 251 240 64 16 chr5 166590417 166590542 -36494990 + L1MEd LINE L1 975 1105 -5113 471 256 111 45 chr5 166590650 166591019 -36494513 + L1MEd LINE L1 1266 1644 -4571 444 262 51 62 chr5 166591245 166591869 -36493663 + L1MEd LINE L1 2065 2635 -3580 23 33 0 0 chr5 166591920 166591950 -36493582 + AT_rich Low_complexity Low_complexity 1 30 0 41042 32 21 1 chr5 166591965 166597992 -36487540 - L1PA2 LINE L1 -2 6153 4 266 235 59 47 chr5 166600232 166600317 -36485215 - L2 LINE L2 0 3272 3187 288 394 28 0 chr5 166600597 166600777 -36484755 - MIR SINE MIR -32 230 46 3898 141 8 14 chr5 166600976 166601615 -36483917 + MER41B LTR ERV1 1 635 0 18630 112 64 39 chr5 166601617 166603449 -36482083 + MER41B-int LTR ERV1 3 1953 -3993 1434 143 131 38 chr5 166603449 166603792 -36481740 - THE1C LTR MaLR 0 375 1 18630 112 64 39 chr5 166603792 166605206 -36480326 + MER41B-int LTR ERV1 1953 3330 -2616 203 176 39 0 chr5 166605207 166605258 -36480274 + GA-rich Low_complexity Low_complexity 4 56 0 200 294 118 0 chr5 166605315 166605383 -36480149 + MIR SINE MIR 66 141 -121 2484 63 0 3 chr5 166605611 166605911 -36479621 + AluY SINE Alu 1 299 -12 683 286 53 13 chr5 166606000 166606227 -36479305 + MIR SINE MIR 15 250 -12 2599 143 33 39 chr5 166606364 166606568 -36478964 + MER31A LTR ERV1 1 205 -280 2313 102 3 0 chr5 166606568 166606873 -36478659 - AluSg SINE Alu -4 306 1 2599 143 33 39 chr5 166606873 166607156 -36478376 + MER31A LTR ERV1 205 485 0 272 239 155 0 chr5 166607466 166607537 -36477995 - MER94 DNA DNA -41 93 12 541 274 128 8 chr5 166608737 166608971 -36476561 - MIR SINE MIR 0 262 1 232 366 98 0 chr5 166609185 166609297 -36476235 + L2 LINE L2 3147 3269 -3 4899 64 0 2 chr5 166609584 166610207 -36475325 - L1PA7 LINE L1 0 6154 5533 1498 63 0 5 chr5 166610207 166610406 -36475126 + L1PA7 LINE L1 5324 5523 -631 2907 69 5 3 chr5 166610406 166610783 -36474749 + L1PA7 LINE L1 5764 6154 0 281 282 276 6 chr5 166611249 166611423 -36474109 + MIR SINE MIR 38 258 -4 2299 125 34 0 chr5 166611423 166611775 -36473757 - THE1B LTR MaLR 0 364 1 190 171 29 0 chr5 166612095 166612130 -36473402 + MIR SINE MIR 89 124 -84 21 0 0 0 chr5 166612269 166612290 -36473242 + AT_rich Low_complexity Low_complexity 1 21 0 1891 147 10 29 chr5 166612293 166612605 -36472927 + AluSx SINE Alu 1 306 -6 291 356 0 10 chr5 166614000 166614104 -36471428 + MIR SINE MIR 3 105 -157 181 348 0 0 chr5 166614888 166614957 -36470575 + MIR SINE MIR 124 192 -70 240 239 0 0 chr5 166616852 166616898 -36468634 + L2 LINE L2 3249 3294 -19 23 33 0 0 chr5 166618151 166618181 -36467351 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr5 166618257 166618284 -36467248 + AT_rich Low_complexity Low_complexity 1 27 0 456 233 136 44 chr5 166618544 166618750 -36466782 - L2 LINE L2 -6 3307 3083 186 308 0 0 chr5 166618996 166619035 -36466497 + L2 LINE L2 3254 3292 -21 182 274 110 0 chr5 166619525 166619598 -36465934 + MIR3 SINE MIR 113 193 -15 737 82 9 0 chr5 166620070 166620180 -36465352 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 2258 119 0 0 chr5 166620897 166621200 -36464332 + AluSc SINE Alu 1 303 -6 194 182 0 0 chr5 166621961 166621994 -36463538 + MIR SINE MIR 110 142 -66 40 87 0 0 chr5 166622575 166622678 -36462854 + AT_rich Low_complexity Low_complexity 1 103 0 23 0 0 0 chr5 166623210 166623233 -36462299 + AT_rich Low_complexity Low_complexity 1 23 0 341 313 43 9 chr5 166623883 166623998 -36461534 + L2 LINE L2 2847 2965 -307 610 249 102 45 chr5 166624220 166624465 -36461067 + MIR SINE MIR 3 261 -1 1356 198 5 128 chr5 166624508 166624953 -36460579 + LTR9 LTR ERV1 1 390 -222 538 246 31 31 chr5 166625118 166625309 -36460223 + LTR19C LTR ERV1 589 779 0 330 282 13 0 chr5 166625309 166625387 -36460145 - MIR SINE MIR -116 146 68 666 275 65 15 chr5 166625514 166625714 -36459818 - MIR SINE MIR -7 255 46 443 301 20 20 chr5 166626173 166626326 -36459206 + MIR SINE MIR 104 256 -6 297 0 0 0 chr5 166626824 166626857 -36458675 + (CA)n Simple_repeat Simple_repeat 2 34 0 1126 241 95 6 chr5 166626900 166627249 -36458283 + MLT1B LTR MaLR 1 380 -10 1850 115 0 84 chr5 166627337 166627659 -36457873 - AluY SINE Alu -15 296 2 330 285 122 52 chr5 166628183 166628670 -36456862 - L2 LINE L2 -64 3249 2687 996 190 15 20 chr5 166628678 166628878 -36456654 + MER58A DNA MER1_type 14 212 -12 640 241 27 88 chr5 166628892 166629220 -36456312 - L2 LINE L2 -685 2629 2322 306 314 24 32 chr5 166629361 166629485 -36456047 + L2 LINE L2 3150 3272 0 284 331 40 33 chr5 166629482 166629633 -36455899 - MIR SINE MIR 0 262 111 * 449 286 23 46 chr5 166629660 166629877 -36455655 - MER102a DNA MER1_type -21 309 98 271 250 83 19 chr5 166630545 166630653 -36454879 - L2 LINE L2 -16 3297 3183 506 301 100 22 chr5 166630884 166631113 -36454419 - MIR SINE MIR -10 252 6 270 342 25 0 chr5 166631427 166631506 -36454026 - L2 LINE L2 -670 2644 2564 1330 98 0 131 chr5 166631522 166631767 -36453765 + MER4B LTR ERV1 396 608 -2 843 187 18 24 chr5 166631903 166632069 -36453463 - FAM SINE Alu -9 40 1 461 287 74 65 chr5 166633773 166634003 -36451529 + MIR SINE MIR 25 256 -6 570 248 0 15 chr5 166634878 166635011 -36450521 - FLAM_A SINE Alu -2 131 1 205 237 13 13 chr5 166635487 166635563 -36449969 + A-rich Low_complexity Low_complexity 5 80 0 475 258 229 22 chr5 166635683 166635950 -36449582 - L2 LINE L2 -3 3310 2989 1905 301 94 32 chr5 166636077 166637155 -36448377 - L2 LINE L2 -610 2704 1561 763 284 38 13 chr5 166637537 166637776 -36447756 - MIR SINE MIR -5 257 13 431 288 78 13 chr5 166637781 166637934 -36447598 - MIR SINE MIR -52 210 48 21 82 0 0 chr5 166638087 166638136 -36447396 + AT_rich Low_complexity Low_complexity 1 49 0 568 276 68 53 chr5 166638384 166638629 -36446903 - L1ME4a LINE L1 -128 5993 5736 1798 174 38 41 chr5 166638629 166639020 -36446512 - MLT1B LTR MaLR 0 390 1 568 276 68 53 chr5 166639020 166639241 -36446291 - L1ME4a LINE L1 -385 5736 5520 453 309 49 0 chr5 166640275 166640437 -36445095 + MIR SINE MIR 64 233 -29 2037 137 0 19 chr5 166640866 166641149 -36444383 + AluSc SINE Alu 1 279 -30 1088 98 6 0 chr5 166641149 166641313 -36444219 + (GA)n Simple_repeat Simple_repeat 2 166 0 2037 137 0 19 chr5 166641313 166641344 -36444188 + AluSc SINE Alu 279 309 0 446 218 95 7 chr5 166641937 166642084 -36443448 - L1ME4a LINE L1 -18 6103 5944 260 392 28 7 chr5 166642643 166642786 -36442746 - MIR3 SINE MIR -59 149 4 388 253 139 38 chr5 166645248 166645406 -36440126 + MIR SINE MIR 70 243 -19 238 283 70 52 chr5 166646233 166646505 -36439027 - L1ME4a LINE L1 -77 6044 5768 22 35 0 0 chr5 166647056 166647085 -36438447 + AT_rich Low_complexity Low_complexity 1 29 0 408 306 99 40 chr5 166647427 166647649 -36437883 + MIR SINE MIR 3 237 -25 227 287 183 17 chr5 166648693 166648808 -36436724 - Charlie8 DNA MER1_type -2141 276 143 329 379 57 19 chr5 166649003 166649214 -36436318 + MIR SINE MIR 37 255 -7 24 53 0 0 chr5 166651666 166651704 -36433828 + AT_rich Low_complexity Low_complexity 1 38 0 420 270 126 17 chr5 166652055 166652229 -36433303 - L2 LINE L2 -3 3310 3118 2509 111 8 16 chr5 166652443 166652821 -36432711 + THE1C LTR MaLR 1 375 0 1957 157 0 0 chr5 166652902 166653189 -36432343 + AluSx SINE Alu 1 287 -25 34 0 0 0 chr5 166653191 166653225 -36432307 + AT_rich Low_complexity Low_complexity 1 34 0 598 257 91 8 chr5 166653628 166653893 -36431639 + L1ME4a LINE L1 5835 6121 0 200 33 0 33 chr5 166654541 166654571 -36430961 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 225 334 88 75 chr5 166656075 166656437 -36429095 - L3b LINE CR1 -92 1491 1125 216 182 0 0 chr5 166658898 166658942 -36426590 + (CAG)n Simple_repeat Simple_repeat 1 44 0 388 291 110 0 chr5 166659898 166660025 -36425507 + MIR SINE MIR 120 260 -2 252 328 75 59 chr5 166660149 166660335 -36425197 - MIR SINE MIR -18 190 2 204 328 0 0 chr5 166660335 166660402 -36425130 + MIR SINE MIR 128 194 -68 548 376 50 0 chr5 166660403 166660621 -36424911 + MIR SINE MIR 23 251 -11 29 0 0 0 chr5 166661492 166661521 -36424011 + AT_rich Low_complexity Low_complexity 1 29 0 241 241 24 12 chr5 166661582 166661665 -36423867 + (TATAA)n Simple_repeat Simple_repeat 5 88 0 337 246 148 14 chr5 166661666 166661808 -36423724 + L2 LINE L2 3149 3309 -4 33 0 0 0 chr5 166661859 166661892 -36423640 + AT_rich Low_complexity Low_complexity 1 33 0 628 274 33 0 chr5 166662301 166662454 -36423078 + MIR SINE MIR 21 178 -84 694 213 38 13 chr5 166662470 166662658 -36422874 - MLT1F LTR MaLR -45 522 323 303 279 65 52 chr5 166663481 166663635 -36421897 - L2 LINE L2 -5 3308 3153 613 301 189 12 chr5 166664493 166665158 -36420374 - L2 LINE L2 -73 3240 2449 341 317 104 16 chr5 166665543 166665726 -36419806 + MIR SINE MIR 44 242 -20 217 78 78 0 chr5 166666157 166666208 -36419324 + T-rich Low_complexity Low_complexity 2 56 0 287 233 233 0 chr5 166666601 166666670 -36418862 - LTR37B LTR ERV1 -5 463 411 189 0 0 0 chr5 166666670 166666691 -36418841 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 287 233 233 0 chr5 166666691 166666741 -36418791 - LTR37B LTR ERV1 -57 411 316 1792 183 0 0 chr5 166667896 166668186 -36417346 - AluJo SINE Alu -11 301 12 2123 107 3 7 chr5 166668869 166669168 -36416364 - AluY SINE Alu -11 300 3 183 235 0 132 chr5 166669367 166669435 -36416097 - MIR3 SINE MIR -54 154 96 227 53 0 26 chr5 166669514 166669552 -36415980 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 7567 27 0 6 chr5 166669552 166670466 -36415066 - L1PA3 LINE L1 -10 6145 5232 2340 213 58 25 chr5 166672514 166673153 -36412379 + L1MC4 LINE L1 6696 7355 -687 1693 212 10 3 chr5 166673154 166673465 -36412067 + Tigger7 DNA MER2_type 5 317 -2170 * 11137 137 37 13 chr5 166673463 166675345 -36410187 + Tigger1 DNA MER2_type 489 2416 -2 443 154 11 66 chr5 166675346 166675437 -36410095 + Tigger7 DNA MER2_type 2502 2587 0 612 155 7 123 chr5 166675445 166675512 -36410020 + L1MC4 LINE L1 7359 7400 -642 1999 132 0 23 chr5 166675512 166675841 -36409691 - AluSx SINE Alu 0 312 1 612 155 7 123 chr5 166675841 166675928 -36409604 + L1MC4 LINE L1 7400 7495 -547 2610 94 8 0 chr5 166679497 166679849 -36405683 + THE1A LTR MaLR 1 355 0 285 250 11 22 chr5 166680048 166680140 -36405392 + GA-rich Low_complexity Low_complexity 2 92 0 349 267 0 12 chr5 166680497 166680583 -36404949 - LTR33A LTR ERVL 0 523 439 673 266 108 63 chr5 166681325 166681523 -36404009 - ERVL LTR ERVL -263 5501 5313 1527 179 10 20 chr5 166681523 166681824 -36403708 - AluJo SINE Alu -14 298 1 673 266 108 63 chr5 166681824 166682068 -36403464 - ERVL LTR ERVL -451 5313 5039 346 240 0 42 chr5 166682259 166682355 -36403177 - ERVL LTR ERVL -962 4802 4711 223 37 0 0 chr5 166682386 166682413 -36403119 + (TTTG)n Simple_repeat Simple_repeat 2 176 0 1127 180 5 5 chr5 166682413 166682613 -36402919 - AluJo SINE Alu -29 283 84 2484 315 56 26 chr5 166682636 166682789 -36402743 - ERVL LTR ERVL -1097 4667 4520 1904 194 47 53 chr5 166682789 166682952 -36402580 + MLT1D LTR MaLR 1 163 -342 2061 149 0 0 chr5 166682952 166683260 -36402272 - AluJb SINE Alu -2 310 3 1904 194 47 53 chr5 166683260 166683602 -36401930 + MLT1D LTR MaLR 163 503 -2 2484 315 56 26 chr5 166683602 166684560 -36400972 - ERVL LTR ERVL -1244 4520 3523 248 212 0 0 chr5 166684588 166684614 -36400918 + A-rich Low_complexity Low_complexity 1 26 -40 2106 126 10 3 chr5 166684614 166684924 -36400608 + AluSx SINE Alu 1 312 0 248 212 0 0 chr5 166684924 166684963 -36400569 + A-rich Low_complexity Low_complexity 25 66 0 1521 311 170 27 chr5 166685017 166685332 -36400200 + L2 LINE L2 1591 1859 -1454 194 0 0 37 chr5 166685332 166685359 -36400173 + (TA)n Simple_repeat Simple_repeat 1 26 0 1521 311 170 27 chr5 166685359 166686317 -36399215 + L2 LINE L2 1859 3073 -240 1030 263 64 64 chr5 166686338 166686809 -36398723 - MLT1H LTR MaLR -4 545 75 253 298 44 76 chr5 166686982 166687140 -36398392 + L2 LINE L2 3112 3264 -49 21 71 0 0 chr5 166687609 166687651 -36397881 + AT_rich Low_complexity Low_complexity 1 42 0 2297 111 0 0 chr5 166688245 166688551 -36396981 + AluSx SINE Alu 1 306 -6 287 245 58 50 chr5 166688865 166689004 -36396528 + MIR SINE MIR 10 149 -113 189 74 0 0 chr5 166689144 166689171 -36396361 + (GA)n Simple_repeat Simple_repeat 2 28 0 372 77 0 0 chr5 166689189 166689241 -36396291 + (CA)n Simple_repeat Simple_repeat 1 52 0 1060 238 51 50 chr5 166690013 166690500 -36395032 + MER39 LTR ERV1 4 707 0 361 269 19 9 chr5 166690803 166690911 -36394621 + T-rich Low_complexity Low_complexity 4 112 0 343 267 10 114 chr5 166691007 166691137 -36394395 + L1ME1 LINE L1 4904 5007 -1139 2335 76 10 0 chr5 166691137 166691428 -36394104 + AluSc SINE Alu 1 294 -15 343 267 10 114 chr5 166691428 166691499 -36394033 + L1ME1 LINE L1 5007 5084 -1062 295 107 16 47 chr5 166691499 166691572 -36393960 - L1PA16 LINE L1 -1 6165 6094 3294 211 75 29 chr5 166691586 166692509 -36393023 + L1ME1 LINE L1 5130 6113 -53 219 326 15 61 chr5 166693658 166693790 -36391742 - MER5A DNA MER1_type -55 134 9 1679 210 51 10 chr5 166695588 166695998 -36389534 - MER95 LTR ERV 0 431 5 22 35 0 0 chr5 166696475 166696504 -36389028 + AT_rich Low_complexity Low_complexity 1 29 0 566 268 183 0 chr5 166697140 166697353 -36388179 - MIR SINE MIR 0 262 11 231 314 12 12 chr5 166697377 166697463 -36388069 - L3 LINE CR1 -219 1358 1273 * 377 294 24 40 chr5 166697461 166697587 -36387945 - L2 LINE L2 0 3313 3190 311 346 28 39 chr5 166697577 166697759 -36387773 - L3 LINE CR1 -301 1276 1097 * 881 135 32 32 chr5 166697769 166697923 -36387609 + MSTA LTR MaLR 1 154 -274 1240 193 68 44 chr5 166697923 166698218 -36387314 - MER61B LTR ERV1 0 425 124 1598 95 62 55 chr5 166698241 166698474 -36387058 + MSTA LTR MaLR 152 389 -39 2009 150 0 0 chr5 166698474 166698767 -36386765 - AluSq SINE Alu -20 293 1 1598 95 62 55 chr5 166698767 166698806 -36386726 + MSTA LTR MaLR 389 426 -2 869 139 11 11 chr5 166699426 166699606 -36385926 + CT-rich Low_complexity Low_complexity 1 180 0 226 295 167 45 chr5 166699774 166699930 -36385602 + MIR3 SINE MIR 5 146 -62 205 289 228 18 chr5 166701125 166701239 -36384293 - L2 LINE L2 -2 3311 3174 269 375 19 10 chr5 166701505 166701609 -36383923 - L3 LINE CR1 -349 1228 1124 2281 119 3 0 chr5 166701687 166701997 -36383535 - AluSx SINE Alu -1 311 1 746 150 53 96 chr5 166702147 166702334 -36383198 - MER3 DNA MER1_type -22 187 9 1549 116 170 8 chr5 166703328 166703587 -36381945 - AluSg1 SINE Alu -8 301 1 499 290 6 41 chr5 166704512 166704694 -36380838 + MIR SINE MIR 19 190 -67 599 317 67 9 chr5 166704903 166705132 -36380400 - MIR SINE MIR -32 230 1 194 307 30 30 chr5 166705245 166705346 -36380186 + L2 LINE L2 3120 3220 -93 226 258 88 31 chr5 166707185 166707344 -36378188 + L1M4 LINE L1 4303 4470 -1676 192 365 9 37 chr5 166707548 166707655 -36377877 - L3 LINE CR1 -156 1421 1318 324 259 191 8 chr5 166708083 166708214 -36377318 + MIR3 SINE MIR 39 193 -15 253 247 0 27 chr5 166708281 166708354 -36377178 + CT-rich Low_complexity Low_complexity 1 71 0 252 254 15 15 chr5 166708471 166708538 -36376994 + MIR SINE MIR 107 173 -89 1155 301 76 18 chr5 166708574 166708601 -36376931 - L2 LINE L2 -16 3297 3273 1782 252 42 12 chr5 166708601 166709105 -36376427 + LTR40a LTR ERVL 1 519 0 1155 301 76 18 chr5 166709105 166709607 -36375925 - L2 LINE L2 -40 3273 2737 392 337 126 61 chr5 166709611 166710181 -36375351 + L2 LINE L2 2298 2904 -410 248 295 115 0 chr5 166710428 166710506 -36375026 + L2 LINE L2 3227 3313 0 209 306 212 24 chr5 166710640 166710725 -36374807 - L2 LINE L2 -14 3299 3199 264 266 51 73 chr5 166711032 166711209 -36374323 + MER112 DNA MER1_type 1 173 -87 224 315 203 0 chr5 166712383 166712526 -36373006 - MIR SINE MIR -7 255 84 315 0 0 0 chr5 166712553 166712588 -36372944 + (TG)n Simple_repeat Simple_repeat 2 36 0 456 260 161 18 chr5 166713337 166713560 -36371972 - MER46C DNA MER2_type -4 334 80 210 98 0 118 chr5 166713560 166713611 -36371921 + (CAAAA)n Simple_repeat Simple_repeat 5 49 0 2094 121 0 0 chr5 166713901 166714258 -36371274 - AluSx SINE Alu 0 357 1 2794 98 0 5 chr5 166715271 166715648 -36369884 - THE1C LTR MaLR 0 375 1 1584 188 40 155 chr5 166715784 166716434 -36369098 - L1MD3 LINE L1 -17 7978 7404 311 247 34 22 chr5 166716435 166716524 -36369008 - MLT1F1 LTR MaLR -443 124 35 716 183 29 142 chr5 166716526 166716837 -36368695 - L1MC3 LINE L1 -690 7095 6820 342 0 0 0 chr5 166716839 166716877 -36368655 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 0 36 0 chr5 166716876 166716904 -36368628 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 1057 152 79 61 chr5 166716920 166717141 -36368391 - L1MA9 LINE L1 -33 6279 6051 2090 134 0 0 chr5 166717141 166717439 -36368093 - AluSg SINE Alu -12 298 1 1057 152 79 61 chr5 166717439 166717494 -36368038 - L1MA9 LINE L1 -261 6051 5998 226 250 74 68 chr5 166718954 166719102 -36366430 + L2 LINE L2 3161 3309 -4 190 348 56 34 chr5 166720069 166720158 -36365374 - MIR3 SINE MIR -17 191 101 322 315 62 77 chr5 166720604 166720864 -36364668 - L3 LINE CR1 -118 1459 1204 752 139 7 13 chr5 166721497 166721648 -36363884 - L1MA8 LINE L1 0 6291 6142 703 255 38 11 chr5 166721853 166722037 -36363495 - MER5A DNA MER1_type 0 189 1 319 315 76 27 chr5 166722378 166722558 -36362974 + MIR SINE MIR 20 204 -58 3370 170 45 6 chr5 166722704 166723394 -36362138 + L1MB3 LINE L1 5458 6174 -9 298 225 155 62 chr5 166723777 166723906 -36361626 - MIR3 SINE MIR -14 194 54 621 273 8 25 chr5 166724245 166724483 -36361049 + L1MC4a LINE L1 5771 6004 -1804 584 213 83 30 chr5 166725279 166725448 -36360084 - MER96B DNA MER1_type? -239 178 1 306 0 0 0 chr5 166726860 166726894 -36358638 + (TG)n Simple_repeat Simple_repeat 1 34 0 789 139 273 0 chr5 166726970 166727028 -36358504 - L1MA6 LINE L1 0 6300 6259 342 115 0 0 chr5 166727028 166727080 -36358452 + (TA)n Simple_repeat Simple_repeat 1 52 0 789 139 273 0 chr5 166727080 166727237 -36358295 - L1MA6 LINE L1 -41 6259 6026 228 217 0 0 chr5 166729069 166729115 -36356417 + CT-rich Low_complexity Low_complexity 3 48 0 251 327 131 12 chr5 166729206 166729374 -36356158 - MIR SINE MIR -17 245 58 194 204 23 0 chr5 166730023 166730067 -36355465 + L2 LINE L2 2932 2976 -296 489 304 29 29 chr5 166730215 166730422 -36355110 + MIR SINE MIR 56 262 0 3132 194 33 69 chr5 166731926 166732682 -36352850 + MER44D DNA MER2_type 1 601 -4 395 244 67 22 chr5 166733135 166733270 -36352262 + L3 LINE CR1 964 1104 -473 274 315 112 7 chr5 166734743 166734886 -36350646 - L3 LINE CR1 -286 1291 1134 530 333 14 14 chr5 166734897 166735119 -36350413 + MLT1H1 LTR MaLR 1 222 -333 258 275 38 0 chr5 166735258 166735338 -36350194 + MLT1G1 LTR MaLR 508 590 -5 341 155 24 60 chr5 166735760 166735844 -36349688 + L1MC4 LINE L1 7828 7908 -134 552 286 121 35 chr5 166736145 166736376 -36349156 - MIR SINE MIR 0 262 12 2030 150 86 20 chr5 166736542 166736949 -36348583 + MER57B LTR ERV1 1 434 0 869 247 137 8 chr5 166736953 166737216 -36348316 + MER57B-int LTR ERV1 3 299 -7238 297 266 6 90 chr5 166737405 166737582 -36347950 + MER57B-int LTR ERV1 825 986 -5815 627 249 21 92 chr5 166739330 166739668 -36345864 + MER57-int LTR ERV1 6831 7144 -393 2422 167 5 11 chr5 166739668 166740105 -36345427 + MER57B LTR ERV1 1 434 0 873 243 73 4 chr5 166740263 166740510 -36345022 - REP3 LTR ERV -7 555 292 10950 92 8 14 chr5 166740901 166742573 -36342959 + HERVH LTR ERV1 968 2629 -5084 1645 144 3 10 chr5 166742674 166742966 -36342566 - HERVH LTR ERV1 -3932 3781 3492 856 135 20 0 chr5 166742956 166743104 -36342428 - HERVH LTR ERV1 -4423 3290 3140 * 12489 94 63 11 chr5 166743083 166745860 -36339672 - HERVH LTR ERV1 -4718 2995 1 3401 62 5 7 chr5 166745862 166746311 -36339221 - LTR7 LTR ERV1 -2 448 1 1717 123 25 18 chr5 166746315 166746599 -36338933 + LTR8 LTR ERV1 406 691 0 2394 192 81 10 chr5 166746641 166747162 -36338370 - MER74A LTR ERVL 0 558 1 567 268 61 48 chr5 166747226 166747454 -36338078 + L2 LINE L2 3083 3313 0 557 259 105 87 chr5 166747894 166748342 -36337190 - LTR33A LTR ERVL 0 523 68 251 319 19 32 chr5 166748504 166748661 -36336871 + PABL_A LTR ERV1 1 155 -505 776 215 5 27 chr5 166748793 166748979 -36336553 + PABL_B LTR ERV1 468 649 -18 275 133 0 0 chr5 166750767 166750812 -36334720 - L1MA5 LINE L1 0 6300 6256 185 363 44 18 chr5 166750824 166750937 -36334595 - L3 LINE CR1 -2 1575 1460 277 349 63 8 chr5 166751129 166751255 -36334277 - L2 LINE L2 -1 3312 3180 199 399 11 27 chr5 166752046 166752229 -36333303 + L2 LINE L2 2688 2867 -447 754 279 189 15 chr5 166752781 166753182 -36332350 - L2 LINE L2 -13 3300 2830 277 312 26 0 chr5 166753623 166753720 -36331812 + MIR SINE MIR 46 143 -66 202 317 59 0 chr5 166754099 166754200 -36331332 - L3 LINE CR1 -325 1252 1146 28 61 0 0 chr5 166754211 166754260 -36331272 + AT_rich Low_complexity Low_complexity 1 49 0 290 361 8 16 chr5 166754514 166754636 -36330896 + L2 LINE L2 2766 2886 -428 204 40 0 0 chr5 166754791 166754816 -36330716 + (CTCTG)n Simple_repeat Simple_repeat 4 28 0 1005 304 80 2 chr5 166754861 166755286 -36330246 + LTR33A LTR ERVL 62 519 -4 716 329 23 10 chr5 166755423 166755730 -36329802 - MLT1I LTR MaLR -12 397 87 447 340 77 49 chr5 166755806 166756418 -36329114 + L2 LINE L2 1947 2575 -739 423 89 25 13 chr5 166756429 166756508 -36329024 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 1488 159 45 12 chr5 166756508 166756753 -36328779 - AluJb SINE Alu -59 253 1 266 264 114 43 chr5 166756982 166757122 -36328410 + L2 LINE L2 3161 3310 -3 * 296 264 226 10 chr5 166757101 166757309 -36328223 - L3 LINE CR1 -725 852 600 3945 178 18 3 chr5 166757454 166758196 -36327336 + L1MD1 LINE L1 5482 6234 -8 255 261 25 8 chr5 166758219 166758338 -36327194 + (TA)n Simple_repeat Simple_repeat 1 121 0 39 68 0 0 chr5 166758498 166758572 -36326960 + AT_rich Low_complexity Low_complexity 1 74 0 288 345 131 39 chr5 166759319 166759754 -36325778 - L2 LINE L2 -8 3305 2831 517 343 188 15 chr5 166759876 166760343 -36325189 + L2 LINE L2 2429 2976 -338 295 240 60 0 chr5 166760581 166760681 -36324851 + L1MA10 LINE L1 6205 6310 -24 358 318 31 90 chr5 166760751 166760974 -36324558 + L1ME LINE L1 5564 5773 -348 803 83 9 0 chr5 166761334 166761442 -36324090 + L1PA10 LINE L1 6054 6162 -6 346 352 4 89 chr5 166761747 166762028 -36323504 + L2 LINE L2 2927 3183 -89 1149 301 41 51 chr5 166762106 166762735 -36322797 - L2 LINE L2 -8 3305 2681 276 313 38 23 chr5 166762866 166762997 -36322535 + MIR SINE MIR 35 167 -95 201 333 148 9 chr5 166764264 166764372 -36321160 + MIR SINE MIR 12 135 -73 22 0 0 0 chr5 166764398 166764420 -36321112 + AT_rich Low_complexity Low_complexity 1 22 0 2108 102 21 3 chr5 166765066 166765351 -36320181 - AluY SINE Alu -10 301 12 1797 108 7 49 chr5 166765351 166765639 -36319893 - AluSp SINE Alu -37 276 1 24 32 0 0 chr5 166766115 166766146 -36319386 + AT_rich Low_complexity Low_complexity 1 31 0 2122 108 14 17 chr5 166766564 166766860 -36318672 + AluSx SINE Alu 1 295 -17 694 155 0 103 chr5 166766925 166767080 -36318452 + AluJb SINE Alu 1 139 -173 346 319 34 8 chr5 166767260 166767379 -36318153 - MIR3 SINE MIR -77 131 10 22 35 0 0 chr5 166768082 166768111 -36317421 + AT_rich Low_complexity Low_complexity 1 29 0 203 321 24 12 chr5 166768491 166768575 -36316957 - MIR3 SINE MIR -121 87 3 24 32 0 0 chr5 166768616 166768647 -36316885 + AT_rich Low_complexity Low_complexity 1 31 0 463 262 16 8 chr5 166769047 166769169 -36316363 + L2 LINE L2 3187 3309 -4 343 250 112 43 chr5 166769171 166769287 -36316245 - MIR SINE MIR -110 152 29 398 342 126 40 chr5 166769962 166770556 -36314976 - L2 LINE L2 -672 2642 1998 191 387 47 9 chr5 166770686 166770792 -36314740 - L2 LINE L2 0 3313 3204 248 346 119 30 chr5 166771420 166771723 -36313809 - L2 LINE L2 -148 3165 2836 180 0 0 0 chr5 166772252 166772272 -36313260 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 331 309 115 50 chr5 166772360 166772499 -36313033 - MER5A DNA MER1_type -3 186 39 234 261 58 101 chr5 166773002 166773140 -36312392 - MIR SINE MIR -111 151 20 267 326 11 11 chr5 166773807 166773899 -36311633 - MIR SINE MIR -131 131 40 1946 150 7 7 chr5 166773956 166774262 -36311270 + AluJo SINE Alu 3 308 -4 620 314 21 5 chr5 166774304 166774498 -36311034 - MIR SINE MIR -53 209 13 710 206 16 32 chr5 166775019 166775208 -36310324 + MER53 DNA DNA 3 188 -1 1809 172 0 7 chr5 166775530 166775832 -36309700 - AluJb SINE Alu -12 300 1 340 318 0 1 chr5 166776074 166776179 -36309353 - MIR SINE MIR -69 139 36 217 282 82 55 chr5 166776468 166776578 -36308954 + MIR SINE MIR 24 136 -126 369 114 25 13 chr5 166776599 166776678 -36308854 + (TA)n Simple_repeat Simple_repeat 1 80 0 197 108 27 0 chr5 166776719 166776756 -36308776 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 23 54 0 0 chr5 166776837 166776874 -36308658 + AT_rich Low_complexity Low_complexity 1 37 0 259 306 86 0 chr5 166777077 166777186 -36308346 - MIR SINE MIR -63 145 56 337 271 55 44 chr5 166777503 166777669 -36307863 + MIR SINE MIR 37 202 -60 598 303 122 0 chr5 166777674 166777895 -36307637 - MIR SINE MIR 0 262 15 2228 101 0 7 chr5 166778931 166779228 -36306304 + AluSg SINE Alu 1 295 -15 1231 115 24 99 chr5 166779271 166779404 -36306128 - L1PA11 LINE L1 0 6174 6067 2385 97 0 0 chr5 166779404 166779713 -36305819 - AluSc SINE Alu 0 309 1 1231 115 24 99 chr5 166779713 166779832 -36305700 - L1PA11 LINE L1 -107 6067 5941 2839 136 19 53 chr5 166779894 166780462 -36305070 - L1MA8 LINE L1 -11 6280 5732 194 339 27 36 chr5 166780515 166780627 -36304905 + L2 LINE L2 2989 3099 -173 279 0 0 0 chr5 166780749 166780780 -36304752 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 340 189 0 94 chr5 166780816 166780922 -36304610 + MER31A LTR ERV1 357 452 -33 359 364 16 16 chr5 166781566 166781695 -36303837 + MER91A DNA MER1_type 52 180 -16 358 351 138 23 chr5 166781847 166782232 -36303300 + L2 LINE L2 2883 3311 -2 291 323 16 31 chr5 166782259 166782386 -36303146 + MIR SINE MIR 60 184 -78 730 262 53 37 chr5 166782740 166782984 -36302548 + MIR SINE MIR 2 249 -13 666 0 0 0 chr5 166782994 166783068 -36302464 + (CTATT)n Simple_repeat Simple_repeat 5 78 0 450 0 0 0 chr5 166783107 166783157 -36302375 + (CCA)n Simple_repeat Simple_repeat 3 52 0 366 295 86 14 chr5 166783235 166783374 -36302158 - MIR SINE MIR -107 155 7 619 130 30 0 chr5 166783624 166783755 -36301777 + MER53 DNA DNA 23 157 -32 251 170 19 0 chr5 166783766 166783819 -36301713 - MER53 DNA DNA -127 62 9 488 329 82 73 chr5 166784239 166784607 -36300925 - L2 LINE L2 -5 3267 2897 195 399 120 6 chr5 166784824 166785140 -36300392 + L2 LINE L2 2403 2754 -560 201 375 31 0 chr5 166785216 166785280 -36300252 + MIR SINE MIR 7 72 -190 222 281 49 12 chr5 166785383 166785465 -36300067 + MIR SINE MIR 75 159 -103 33 56 0 0 chr5 166785471 166785525 -36300007 + AT_rich Low_complexity Low_complexity 1 54 0 1101 267 132 16 chr5 166785869 166786261 -36299271 - L1MEc LINE L1 -3354 2861 2516 1632 102 0 181 chr5 166786261 166786642 -36298890 - AluSx SINE Alu 0 312 1 1101 267 132 16 chr5 166786642 166786994 -36298538 - L1MEc LINE L1 -3699 2516 2095 186 231 19 0 chr5 166787081 166787133 -36298399 - MIR SINE MIR -61 201 149 2582 190 20 5 chr5 166787469 166788026 -36297506 - L1MB8 LINE L1 -244 5934 5370 * 3028 243 104 59 chr5 166788024 166790447 -36295085 + L1ME1 LINE L1 3625 6158 -8 332 360 7 7 chr5 166790561 166790697 -36294835 + MIR3 SINE MIR 62 197 -11 246 364 0 10 chr5 166791194 166791293 -36294239 - MIR SINE MIR -136 126 29 377 395 74 28 chr5 166791381 166791952 -36293580 - L2 LINE L2 0 3272 2619 39 80 0 0 chr5 166792176 166792264 -36293268 + AT_rich Low_complexity Low_complexity 1 88 0 385 158 33 71 chr5 166792276 166792460 -36293072 + (TATAA)n Simple_repeat Simple_repeat 2 178 0 644 329 83 47 chr5 166792578 166793263 -36292269 - L2 LINE L2 -798 2516 1807 2215 92 7 16 chr5 166793592 166793898 -36291634 + AluSq SINE Alu 3 305 -8 412 325 33 38 chr5 166795435 166795647 -36289885 + MIR SINE MIR 23 233 -29 25 65 0 0 chr5 166795772 166795818 -36289714 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 166795852 166795881 -36289651 + AT_rich Low_complexity Low_complexity 1 29 0 599 287 120 14 chr5 166795896 166796171 -36289361 - L3 LINE CR1 -179 1398 1095 1561 123 35 0 chr5 166796247 166796475 -36289057 + AluSx SINE Alu 56 291 -21 1954 167 94 0 chr5 166796828 166797211 -36288321 - MSTB1 LTR MaLR -4 428 10 240 190 13 25 chr5 166797337 166797416 -36288116 + (TTTA)n Simple_repeat Simple_repeat 2 79 0 826 228 61 5 chr5 166797526 166797723 -36287809 - MER3 DNA MER1_type -1 208 1 288 0 0 0 chr5 166797770 166797802 -36287730 + (CA)n Simple_repeat Simple_repeat 2 33 0 513 242 91 35 chr5 166797844 166798042 -36287490 - MLT1K LTR MaLR -14 574 366 1969 175 20 35 chr5 166798095 166798496 -36287036 - MSTD LTR MaLR 0 396 2 1979 114 7 11 chr5 166798528 166798808 -36286724 - AluSq SINE Alu -2 311 33 21 0 0 0 chr5 166799127 166799148 -36286384 + AT_rich Low_complexity Low_complexity 1 21 0 230 227 0 45 chr5 166799446 166799512 -36286020 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr5 166800840 166800861 -36284671 + AT_rich Low_complexity Low_complexity 1 21 0 206 359 29 0 chr5 166800896 166800999 -36284533 - L2 LINE L2 -626 2688 2583 513 314 14 5 chr5 166801727 166801934 -36283598 + LTR33 LTR ERVL 10 218 -303 352 344 0 0 chr5 166802154 166802250 -36283282 + MER5A DNA MER1_type 14 109 -80 418 292 108 32 chr5 166802309 166802494 -36283038 + MIR SINE MIR 1 199 -63 400 188 89 50 chr5 166802521 166802544 -36282988 - L2 LINE L2 -3 3310 3289 1051 243 37 53 chr5 166802544 166802922 -36282610 + MER93b LTR ERV1 2 373 0 400 188 89 50 chr5 166802922 166802999 -36282533 - L2 LINE L2 -24 3289 3206 447 294 16 32 chr5 166803285 166803474 -36282058 + MIR SINE MIR 14 196 -65 2317 100 10 0 chr5 166804344 166804653 -36280879 - AluSq SINE Alu -1 312 1 338 232 205 9 chr5 166805097 166805209 -36280323 + MIR SINE MIR 36 169 -93 546 318 36 36 chr5 166805339 166805562 -36279970 - MIR SINE MIR 0 262 40 288 0 0 0 chr5 166805644 166805676 -36279856 + (TG)n Simple_repeat Simple_repeat 1 32 0 189 0 0 0 chr5 166805675 166805696 -36279836 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 3275 167 8 12 chr5 166805704 166805790 -36279742 - L1MA4A LINE L1 -135 6168 6083 2360 82 0 3 chr5 166805790 166806081 -36279451 + AluSx SINE Alu 9 298 -14 3275 167 8 12 chr5 166806081 166806633 -36278899 - L1MA4A LINE L1 -220 6083 5533 19754 154 29 12 chr5 166806633 166808474 -36277058 - L1 LINE L1 -3786 3779 1971 2717 16 0 6 chr5 166808474 166808787 -36276745 - AluY SINE Alu 0 311 1 19754 154 29 12 chr5 166808787 166810650 -36274882 - L1 LINE L1 -5594 1971 15 422 167 0 0 chr5 166810830 166810908 -36274624 - L1MA4A LINE L1 -751 5552 5475 40610 35 23 1 chr5 166810924 166816939 -36268593 - L1PA3 LINE L1 0 6155 7 3717 189 45 19 chr5 166816940 166817862 -36267670 - L1P4 LINE L1 -675 5491 4541 2159 116 3 28 chr5 166817862 166818180 -36267352 - AluSx SINE Alu -2 310 1 3717 189 45 19 chr5 166818180 166818328 -36267204 - L1P4 LINE L1 -1625 4541 4398 333 171 98 0 chr5 166818336 166818418 -36267114 - L1M4 LINE L1 -818 5328 5239 786 223 112 0 chr5 166818418 166818606 -36266926 - MER82 DNA MER2_type -1 652 444 361 351 70 0 chr5 166818626 166818797 -36266735 + MIR SINE MIR 2 184 -78 276 138 53 11 chr5 166818831 166818925 -36266607 + (TA)n Simple_repeat Simple_repeat 1 98 0 323 253 12 12 chr5 166818975 166819058 -36266474 - MER82 DNA MER2_type -557 96 14 505 220 0 0 chr5 166819079 166819211 -36266321 - L1M4 LINE L1 -904 5242 5111 259 368 32 11 chr5 166819325 166819420 -36266112 - MIR SINE MIR -148 114 18 221 281 35 0 chr5 166819983 166820040 -36265492 + polypyrimidine Low_complexity Low_complexity 1 59 0 958 244 53 4 chr5 166820229 166820495 -36265037 + MER58B DNA MER1_type 1 279 -62 680 247 47 93 chr5 166820656 166821016 -36264516 + L1MEc LINE L1 2001 2335 -4061 3843 157 15 31 chr5 166821016 166821801 -36263731 - L1MA7 LINE L1 0 6291 5519 680 247 47 93 chr5 166821801 166821925 -36263607 + L1MEc LINE L1 2335 2463 -3933 417 169 13 0 chr5 166821930 166822007 -36263525 + MER58B DNA MER1_type 262 339 -2 32 35 0 18 chr5 166822061 166822096 -36263436 + AT_rich Low_complexity Low_complexity 1 36 -20 2202 86 10 48 chr5 166822096 166822410 -36263122 - AluSg SINE Alu -8 302 1 32 35 0 18 chr5 166822410 166822431 -36263101 + AT_rich Low_complexity Low_complexity 36 56 0 721 211 7 0 chr5 166822582 166822729 -36262803 + L1PB3 LINE L1 6007 6154 0 517 309 87 16 chr5 166823328 166823580 -36261952 + L3 LINE CR1 1093 1362 -215 954 227 59 23 chr5 166825089 166825345 -36260187 - MLT1D LTR MaLR -139 366 102 333 68 0 0 chr5 166825366 166825410 -36260122 + MLT1D LTR MaLR 48 91 -414 699 275 26 12 chr5 166826938 166827158 -36258374 + MIR SINE MIR 38 262 0 294 175 0 0 chr5 166828265 166828345 -36257187 + T-rich Low_complexity Low_complexity 1 80 0 8902 17 0 1 chr5 166828345 166830218 -36255314 - L1HS LINE L1 0 6155 4284 4707 21 0 0 chr5 166830209 166830777 -36254755 + L1HS LINE L1 3719 4286 -1860 * 757 284 81 44 chr5 166831165 166831485 -36254047 + L2 LINE L2 2873 3204 -109 192 333 16 0 chr5 166831831 166831894 -36253638 + L2 LINE L2 3184 3247 -25 2337 75 14 0 chr5 166832506 166832799 -36252733 - AluSq SINE Alu -16 297 1 471 318 51 20 chr5 166833300 166833495 -36252037 + MIR SINE MIR 62 262 0 449 285 103 0 chr5 166833510 166833675 -36251857 + L3 LINE CR1 1384 1565 -12 482 310 59 15 chr5 166834037 166834308 -36251224 - L3 LINE CR1 -156 1421 1139 366 344 53 22 chr5 166834484 166834711 -36250821 + L2 LINE L2 2140 2373 -941 * 471 292 0 22 chr5 166834688 166834825 -36250707 + MIR SINE MIR 102 235 -27 487 254 235 52 chr5 166835356 166835628 -36249904 + MER5C DNA MER1_type 3 324 0 227 340 47 0 chr5 166835628 166835710 -36249822 + MIR SINE MIR 30 116 -146 23 0 0 0 chr5 166835881 166835904 -36249628 + AT_rich Low_complexity Low_complexity 1 23 0 542 275 55 5 chr5 166836211 166836411 -36249121 - L2 LINE L2 -518 2796 2587 828 175 0 7 chr5 166838277 166838420 -36247112 + MER5B DNA MER1_type 1 142 -36 297 235 317 29 chr5 166838433 166838676 -36246856 + L2 LINE L2 1650 1962 -1352 2053 115 0 0 chr5 166838712 166838991 -36246541 - AluSx SINE Alu -19 293 15 476 187 0 0 chr5 166839082 166839173 -36246359 + L1MC4 LINE L1 7685 7775 -267 510 188 31 0 chr5 166839200 166839296 -36246236 - MER5A DNA MER1_type -90 99 1 1075 168 41 45 chr5 166839296 166839540 -36245992 + L1MC4 LINE L1 7800 8042 0 1224 280 148 34 chr5 166839578 166840192 -36245340 + L2 LINE L2 2186 2869 -445 316 77 231 0 chr5 166840210 166840262 -36245270 + MLT1E2 LTR MaLR 1 64 -562 23 0 0 0 chr5 166841937 166841960 -36243572 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 166842572 166842594 -36242938 + AT_rich Low_complexity Low_complexity 1 22 0 255 289 52 52 chr5 166843114 166843211 -36242321 - MIR3 SINE MIR -5 203 107 231 365 39 19 chr5 166843348 166843452 -36242080 - L3 LINE CR1 -105 1472 1367 378 339 66 11 chr5 166843999 166844182 -36241350 + MIR SINE MIR 20 212 -50 221 57 57 19 chr5 166844212 166844265 -36241267 + (CATAC)n Simple_repeat Simple_repeat 2 56 0 27 0 0 0 chr5 166844498 166844525 -36241007 + AT_rich Low_complexity Low_complexity 1 27 0 657 296 46 28 chr5 166845815 166846031 -36239501 + MIR SINE MIR 41 260 -2 409 279 26 10 chr5 166846161 166846366 -36239166 + L1MEc LINE L1 2155 2327 -3888 * 1133 253 135 7 chr5 166846347 166846901 -36238631 + L1MEc LINE L1 2921 3545 -2670 1151 290 93 49 chr5 166847140 166847854 -36237678 + L2 LINE L2 2461 3266 -47 2303 36 18 0 chr5 166847854 166848167 -36237365 + AluY SINE Alu 1 318 0 1151 290 93 49 chr5 166848167 166848211 -36237321 + L2 LINE L2 3266 3307 -6 1585 160 4 21 chr5 166848825 166849106 -36236426 - AluJb SINE Alu -36 276 1 24 0 0 0 chr5 166849703 166849727 -36235805 + AT_rich Low_complexity Low_complexity 1 24 0 2105 121 0 0 chr5 166849785 166850105 -36235427 + AluSx SINE Alu 1 320 0 243 0 0 0 chr5 166850342 166850369 -36235163 + (CAT)n Simple_repeat Simple_repeat 1 27 0 223 354 61 20 chr5 166850379 166850526 -36235006 - MER5B DNA MER1_type 0 178 26 202 371 71 21 chr5 166852958 166853098 -36232434 - L3 LINE CR1 -13 1564 1418 309 51 0 0 chr5 166853125 166853164 -36232368 + (TA)n Simple_repeat Simple_repeat 1 39 0 245 220 0 20 chr5 166853164 166853207 -36232325 + Alu SINE Alu 236 279 -23 321 84 42 0 chr5 166853221 166853292 -36232240 + (TA)n Simple_repeat Simple_repeat 1 74 0 4334 254 70 20 chr5 166853308 166854261 -36231271 + L1MB7 LINE L1 3181 4084 -2100 198 0 0 0 chr5 166854261 166854283 -36231249 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 4334 254 70 20 chr5 166854283 166856129 -36229403 + L1MB7 LINE L1 4084 6174 -10 31 68 0 0 chr5 166856629 166856688 -36228844 + AT_rich Low_complexity Low_complexity 1 59 0 283 313 112 33 chr5 166856749 166856942 -36228590 - L1MEd LINE L1 -3245 2884 2708 2631 23 7 3 chr5 166856942 166857252 -36228280 - AluY SINE Alu 0 311 1 283 313 112 33 chr5 166857252 166857792 -36227740 - L1MEd LINE L1 -3421 2708 2093 352 279 114 61 chr5 166858083 166858380 -36227152 - L1MEd LINE L1 -4952 1167 855 359 331 0 30 chr5 166859033 166859166 -36226366 + L2 LINE L2 2854 2982 -331 181 321 54 18 chr5 166859239 166859295 -36226237 + L2 LINE L2 3108 3165 -107 180 111 0 0 chr5 166859410 166859437 -36226095 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 298 231 176 8 chr5 166859843 166859974 -36225558 - MIR SINE MIR -65 143 43 708 240 108 10 chr5 166860151 166860355 -36225177 - MIR SINE MIR -32 230 7 214 191 40 56 chr5 166861186 166861312 -36224220 + (TATAA)n Simple_repeat Simple_repeat 1 124 0 308 245 0 75 chr5 166861315 166861409 -36224123 - L1MC4 LINE L1 -1339 6703 6617 244 64 43 0 chr5 166861670 166861717 -36223815 + (TA)n Simple_repeat Simple_repeat 2 50 0 1591 169 0 15 chr5 166861759 166862032 -36223500 - AluJo SINE Alu -39 273 5 23 0 0 0 chr5 166862216 166862239 -36223293 + AT_rich Low_complexity Low_complexity 1 23 0 338 328 48 0 chr5 166862239 166862364 -36223168 - MIR SINE MIR -32 230 100 264 30 0 0 chr5 166863076 166863109 -36222423 + (CA)n Simple_repeat Simple_repeat 2 34 0 1698 188 0 32 chr5 166863118 166863426 -36222106 - AluJo SINE Alu -14 298 1 2342 84 3 3 chr5 166863928 166864239 -36221293 - AluY SINE Alu 0 311 1 647 144 45 61 chr5 166864327 166864459 -36221073 + FLAM_C SINE Alu 2 131 -2 232 284 179 0 chr5 166864588 166864655 -36220877 + L2 LINE L2 3231 3309 -4 1647 227 46 60 chr5 166865202 166865699 -36219833 + MLT1D LTR MaLR 1 490 -15 2113 112 0 0 chr5 166866786 166867089 -36218443 + AluSg SINE Alu 2 304 0 763 249 13 61 chr5 166867245 166867257 -36218275 + MER58A DNA MER1_type 6 17 -2403 1156 220 53 0 chr5 166867257 166867484 -36218048 + MER8 DNA MER2_type 1 239 0 763 249 13 61 chr5 166867484 166867700 -36217832 + MER58A DNA MER1_type 17 223 -1 320 311 66 25 chr5 166868140 166868262 -36217270 - MIR3 SINE MIR -79 129 3 24 0 0 0 chr5 166868877 166868901 -36216631 + AT_rich Low_complexity Low_complexity 1 24 0 1985 148 14 0 chr5 166868981 166869278 -36216254 + AluSx SINE Alu 1 301 -11 987 253 14 0 chr5 166871828 166872049 -36213483 + MER58A DNA MER1_type 1 224 0 2258 113 0 0 chr5 166872400 166872709 -36212823 - AluSc SINE Alu 0 309 1 1803 215 26 56 chr5 166873623 166874088 -36211444 + MLT1D LTR MaLR 1 451 -54 276 111 0 0 chr5 166874096 166874141 -36211391 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 949 57 0 8 chr5 166874141 166874264 -36211268 - L1PA8 LINE L1 -24 6148 6027 607 85 43 0 chr5 166874326 166874420 -36211112 - L1PA8 LINE L1 -134 6038 5941 357 194 14 0 chr5 166874436 166874508 -36211024 + MLT1D LTR MaLR 433 505 0 399 368 90 5 chr5 166874860 166875072 -36210460 - MIR SINE MIR -19 243 14 821 291 98 14 chr5 166875096 166875381 -36210151 - L2 LINE L2 -376 2938 2630 208 211 35 26 chr5 166875538 166875652 -36209880 + (TA)n Simple_repeat Simple_repeat 2 116 0 203 192 14 55 chr5 166876269 166876342 -36209190 + CT-rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr5 166876781 166876802 -36208730 + AT_rich Low_complexity Low_complexity 1 21 0 212 231 0 39 chr5 166877594 166877646 -36207886 - MIR3 SINE MIR -9 199 150 532 250 96 0 chr5 166877658 166877814 -36207718 + MER113 DNA MER1_type? 288 458 -63 1523 167 14 54 chr5 166878469 166878783 -36206749 + AluJo SINE Alu 3 304 0 2139 114 0 25 chr5 166879178 166879494 -36206038 + AluSx SINE Alu 1 308 -4 2399 73 0 7 chr5 166880315 166880615 -36204917 - AluSg SINE Alu -12 298 1 640 173 187 89 chr5 166880916 166881130 -36204402 + MIR SINE MIR 2 236 -26 293 245 59 29 chr5 166881962 166882064 -36203468 + MIR SINE MIR 157 261 -1 240 359 34 8 chr5 166882363 166882480 -36203052 - L3 LINE CR1 -167 1410 1291 1813 159 29 46 chr5 166882704 166883118 -36202414 - L1MA7 LINE L1 -5 6286 5880 294 289 145 30 chr5 166884017 166884183 -36201349 - MIR SINE MIR -77 185 1 256 329 108 60 chr5 166884251 166884585 -36200947 - L3 LINE CR1 -151 1426 1077 318 330 76 27 chr5 166885311 166885496 -36200036 - L2 LINE L2 -543 2771 2578 21 36 0 0 chr5 166885699 166885727 -36199805 + AT_rich Low_complexity Low_complexity 1 28 0 407 292 13 28 chr5 166887042 166887228 -36198304 + MIR3 SINE MIR 20 203 -5 229 211 100 44 chr5 166887244 166887334 -36198198 + L1PA15-16 LINE L1 361 455 -6394 219 305 17 68 chr5 166888035 166888153 -36197379 + MIR SINE MIR 31 142 -66 259 311 97 0 chr5 166888529 166888632 -36196900 - MIR SINE MIR -63 145 33 422 345 127 13 chr5 166889259 166889488 -36196044 - L3 LINE CR1 -117 1460 1206 23 0 0 0 chr5 166889668 166889691 -36195841 + AT_rich Low_complexity Low_complexity 1 23 0 198 171 0 0 chr5 166890906 166890947 -36194585 + (TA)n Simple_repeat Simple_repeat 1 41 0 236 229 171 0 chr5 166890960 166891030 -36194502 + MIR SINE MIR 168 249 -13 526 219 0 58 chr5 166891409 166891546 -36193986 + MER69A DNA AcHobo 1 129 -48 219 278 0 0 chr5 166891552 166891606 -36193926 + (CCA)n Simple_repeat Simple_repeat 1 54 0 261 83 0 0 chr5 166891665 166891701 -36193831 + (TC)n Simple_repeat Simple_repeat 2 37 0 42 0 0 0 chr5 166891894 166891936 -36193596 + AT_rich Low_complexity Low_complexity 1 42 0 2003 158 0 0 chr5 166892056 166892348 -36193184 - AluSx SINE Alu -18 294 3 429 97 0 28 chr5 166892564 166892660 -36192872 - FLAM_C SINE Alu 0 167 74 581 229 8 0 chr5 166893255 166893373 -36192159 + FLAM_C SINE Alu 1 119 -24 1109 319 22 35 chr5 166894971 166895372 -36190160 + L2 LINE L2 2913 3308 -5 243 0 0 0 chr5 166895596 166895623 -36189909 + (TG)n Simple_repeat Simple_repeat 1 27 0 22 99 0 0 chr5 166896658 166896729 -36188803 + AT_rich Low_complexity Low_complexity 1 71 0 244 310 35 49 chr5 166897633 166897775 -36187757 - MIR3 SINE MIR -3 205 66 2037 104 14 3 chr5 166898513 166898801 -36186731 + AluSc SINE Alu 1 291 -18 390 91 0 0 chr5 166898806 166898861 -36186671 + (CA)n Simple_repeat Simple_repeat 2 56 0 467 298 79 22 chr5 166899093 166899271 -36186261 + MIR SINE MIR 22 209 -53 186 323 0 0 chr5 166899353 166899415 -36186117 + MIR3 SINE MIR 114 175 -33 1722 48 9 31 chr5 166900881 166901110 -36184422 + AluY SINE Alu 74 297 -14 180 77 0 0 chr5 166901154 166901180 -36184352 + (CA)n Simple_repeat Simple_repeat 1 26 0 31 92 0 0 chr5 166901217 166901304 -36184228 + AT_rich Low_complexity Low_complexity 1 87 0 2062 88 0 66 chr5 166901337 166901655 -36183877 - AluY SINE Alu -14 297 1 2330 84 0 3 chr5 166902176 166902474 -36183058 + AluY SINE Alu 1 297 -14 207 0 0 0 chr5 166902523 166902546 -36182986 + (TG)n Simple_repeat Simple_repeat 2 24 0 2212 67 0 67 chr5 166902621 166902937 -36182595 + AluY SINE Alu 1 295 -16 382 267 39 94 chr5 166902981 166903161 -36182371 - MIR SINE MIR -84 178 9 1841 176 17 52 chr5 166903214 166903618 -36181914 + MLT1B LTR MaLR 1 390 0 731 223 124 132 chr5 166903758 166903908 -36181624 - MER67A LTR ERV1 0 543 393 2168 143 31 8 chr5 166903908 166904264 -36181268 - THE1B LTR MaLR 0 364 1 10595 118 28 2 chr5 166904264 166905804 -36179728 - THE1B-int LTR MaLR 0 1580 1 2220 117 33 19 chr5 166905804 166906163 -36179369 - THE1B LTR MaLR 0 364 1 731 223 124 132 chr5 166906163 166906557 -36178975 - MER67A LTR ERV1 -147 396 1 255 400 0 0 chr5 166907173 166907283 -36178249 - MIR SINE MIR -123 139 30 319 345 9 0 chr5 166907516 166907626 -36177906 - L2 LINE L2 -13 3259 3149 276 377 9 0 chr5 166908039 166908145 -36177387 - MIR SINE MIR -65 143 37 262 326 114 38 chr5 166908341 166908525 -36177007 - MIR SINE MIR -7 255 58 2535 285 41 8 chr5 166908747 166909572 -36175960 + L1MEc LINE L1 20 871 -5525 677 259 8 78 chr5 166909593 166909848 -36175684 + L1MEc LINE L1 38 274 -6122 994 255 113 14 chr5 166909864 166910209 -36175323 + L1MEc LINE L1 594 972 -5424 898 268 72 79 chr5 166910243 166910578 -36174954 + L1MEc LINE L1 1052 1388 -5008 369 0 0 0 chr5 166910578 166910619 -36174913 + (TG)n Simple_repeat Simple_repeat 2 42 0 898 268 72 79 chr5 166910619 166911235 -36174297 + L1MEc LINE L1 1388 2194 -4202 1261 173 0 5 chr5 166911238 166911446 -36174086 + AluJb SINE Alu 86 292 -20 868 204 49 46 chr5 166911634 166911958 -36173574 + L1MEc LINE L1 2241 2565 -3650 184 395 61 0 chr5 166912130 166912244 -36173288 + L3 LINE CR1 1287 1407 -170 1273 122 0 0 chr5 166912360 166912532 -36173000 - AluSg/x SINE Alu -21 289 118 2067 70 0 21 chr5 166912539 166912826 -36172706 - L1PA8 LINE L1 -9 6163 5883 1425 66 0 0 chr5 166912826 166913009 -36172523 - L1PA7 LINE L1 -209 5945 5763 * 1600 71 5 0 chr5 166912995 166913207 -36172325 - L1PA7 LINE L1 -631 5523 5311 322 107 0 36 chr5 166913189 166913245 -36172287 + L1P4 LINE L1 5528 5581 -582 * 5252 55 5 5 chr5 166913232 166914002 -36171530 - L1PA7 LINE L1 -238 5916 5147 1294 255 19 50 chr5 166914002 166914477 -36171055 - L1M4 LINE L1 -2196 3950 3491 303 216 89 10 chr5 166914751 166914854 -36170678 + L1MD1 LINE L1 6128 7993 -2 2055 238 31 11 chr5 166914911 166915462 -36170070 + L1ME1 LINE L1 5600 6161 -5 225 282 65 8 chr5 166915555 166915679 -36169853 + L1ME4a LINE L1 5991 6121 0 204 365 0 42 chr5 166915714 166915810 -36169722 - MIR3 SINE MIR -24 184 93 959 238 25 8 chr5 166915962 166916197 -36169335 - MER8 DNA MER2_type 0 239 1 512 273 139 19 chr5 166916487 166916696 -36168836 + MIR SINE MIR 29 262 0 180 217 65 0 chr5 166917380 166917426 -36168106 + L2 LINE L2 3247 3295 -18 267 271 134 13 chr5 166917480 166917658 -36167874 + MIR SINE MIR 6 206 -56 294 268 129 63 chr5 166918632 166918799 -36166733 - MIR3 SINE MIR -14 194 14 988 190 44 34 chr5 166918960 166919165 -36166367 + MER20 DNA MER1_type 8 214 -5 2118 122 0 3 chr5 166919311 166919607 -36165925 - AluSg SINE Alu -15 295 1 205 233 33 0 chr5 166921508 166921568 -36163964 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 365 263 100 40 chr5 166921626 166921805 -36163727 + MIR3 SINE MIR 13 204 -4 202 342 61 44 chr5 166922855 166922969 -36162563 + MIR SINE MIR 7 122 -140 23 54 0 0 chr5 166922975 166923012 -36162520 + AT_rich Low_complexity Low_complexity 1 37 0 181 283 75 0 chr5 166923316 166923369 -36162163 + MIR SINE MIR 36 92 -170 206 278 0 37 chr5 166923418 166923472 -36162060 + L2 LINE L2 3197 3248 -24 500 284 77 0 chr5 166923750 166923905 -36161627 + MIR SINE MIR 2 168 -94 193 219 24 0 chr5 166923956 166923997 -36161535 - MIR SINE MIR -11 251 210 231 221 23 23 chr5 166924000 166924086 -36161446 + L1MC4 LINE L1 6617 6702 -1340 * 260 261 0 0 chr5 166924078 166924166 -36161366 - L1MC4 LINE L1 -1340 6702 6615 198 209 0 0 chr5 166924168 166924211 -36161321 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 206 250 21 0 chr5 166924215 166924263 -36161269 + MIR SINE MIR 196 244 -18 231 36 0 0 chr5 166924263 166924291 -36161241 + (TTA)n Simple_repeat Simple_repeat 2 29 0 228 328 0 0 chr5 166924560 166924624 -36160908 + MIR SINE MIR 77 140 -68 26 88 0 0 chr5 166924650 166924718 -36160814 + AT_rich Low_complexity Low_complexity 1 68 0 578 348 106 44 chr5 166924908 166925605 -36159927 + L2 LINE L2 2494 3228 -85 583 291 186 0 chr5 166926013 166926233 -36159299 - MIR SINE MIR 0 262 2 1711 184 30 9 chr5 166926320 166926656 -36158876 - MER2 DNA MER2_type -1 343 1 1649 146 70 43 chr5 166926666 166926994 -36158538 - MER1B DNA MER1_type 0 337 1 760 253 62 17 chr5 166927324 166927565 -36157967 - MIR SINE MIR -2 260 9 305 288 0 14 chr5 166927926 166927999 -36157533 - MIR3 SINE MIR -21 187 116 1035 281 9 21 chr5 166928006 166928344 -36157188 + L1ME3 LINE L1 5829 6160 -2 226 211 0 0 chr5 166928687 166928725 -36156807 + L2 LINE L2 3220 3257 -15 21 0 0 0 chr5 166928748 166928769 -36156763 + AT_rich Low_complexity Low_complexity 1 21 0 2079 156 0 0 chr5 166928892 166929200 -36156332 + AluSx SINE Alu 1 308 -4 1280 223 91 95 chr5 166929833 166930510 -36155022 + L1MEc LINE L1 1827 2481 -3734 6621 36 0 6 chr5 166930510 166931316 -36154216 + L1PA4 LINE L1 5352 6152 -3 1280 223 91 95 chr5 166931316 166931724 -36153808 + L1MEc LINE L1 2481 2889 -3326 2079 129 0 13 chr5 166931860 166932163 -36153369 - AluSp SINE Alu -14 299 1 490 302 96 42 chr5 166932285 166932706 -36152826 + L1ME LINE L1 586 1023 -5057 2433 255 71 25 chr5 166932716 166934400 -36151132 + L1ME LINE L1 3969 5735 -361 276 174 0 0 chr5 166934400 166934446 -36151086 - Tigger4(Zombi) DNA MER2_type 0 2731 2686 23 54 0 0 chr5 166934446 166934483 -36151049 + AT_rich Low_complexity Low_complexity 1 37 0 446 333 136 41 chr5 166934815 166935205 -36150327 + L3 LINE CR1 1015 1441 -136 27 0 0 0 chr5 166936047 166936074 -36149458 + AT_rich Low_complexity Low_complexity 1 27 0 18302 22 0 0 chr5 166936536 166938778 -36146754 - L1PA3 LINE L1 -1473 4673 2433 7621 25 0 0 chr5 166938777 166940239 -36145293 + L1PA3 LINE L1 4674 6135 -20 * 385 303 0 28 chr5 166940260 166940369 -36145163 + MIR SINE MIR 20 125 -137 255 316 13 0 chr5 166940383 166940459 -36145073 + L2 LINE L2 3232 3308 -5 367 326 28 62 chr5 166940935 166941113 -36144419 + L2 LINE L2 2835 3006 -307 896 214 52 9 chr5 166941369 166941579 -36143953 + MER20 DNA MER1_type 1 219 0 209 276 211 24 chr5 166941605 166941728 -36143804 + L2 LINE L2 2598 2743 -571 204 267 105 35 chr5 166941780 166941866 -36143666 - MIR SINE MIR -87 175 84 425 333 38 50 chr5 166942020 166942281 -36143251 + L1ME LINE L1 5561 5818 -344 29 0 0 0 chr5 166942306 166942335 -36143197 + AT_rich Low_complexity Low_complexity 1 29 0 21 82 0 0 chr5 166942371 166942420 -36143112 + AT_rich Low_complexity Low_complexity 1 49 0 195 167 0 0 chr5 166943123 166943165 -36142367 + A-rich Low_complexity Low_complexity 1 42 0 405 73 0 0 chr5 166943168 166943223 -36142309 + Alu SINE Alu 1 55 -256 256 252 0 134 chr5 166943604 166943652 -36141880 - MIR3 SINE MIR -6 202 178 1611 130 126 0 chr5 166943652 166943913 -36141619 + AluSx SINE Alu 1 294 -18 256 252 0 134 chr5 166943913 166943983 -36141549 - MIR3 SINE MIR -30 178 100 186 281 72 92 chr5 166943998 166944151 -36141381 - L2 LINE L2 0 3313 3164 323 320 3 12 chr5 166944201 166944309 -36141223 + MER5A DNA MER1_type 63 166 -12 332 294 61 43 chr5 166944517 166944680 -36140852 - MIR SINE MIR -41 221 56 207 225 0 0 chr5 166944695 166944735 -36140797 + MIR3 SINE MIR 122 161 -47 604 291 117 19 chr5 166945589 166945710 -36139822 - MIR SINE MIR -25 237 129 1434 141 0 56 chr5 166945710 166945959 -36139573 - MER46A DNA MER2_type -1 235 1 604 291 117 19 chr5 166945959 166946050 -36139482 - MIR SINE MIR -133 129 4 229 322 73 45 chr5 166946269 166946441 -36139091 - MIR3 SINE MIR -28 180 36 569 242 6 45 chr5 166947120 166947277 -36138255 - MIR3 SINE MIR -25 183 33 193 343 29 0 chr5 166947544 166947614 -36137918 + L3 LINE CR1 1503 1574 -3 273 274 0 27 chr5 166947774 166947847 -36137685 + MIR SINE MIR 74 144 -64 280 217 0 35 chr5 166947967 166948082 -36137450 + (TATG)n Simple_repeat Simple_repeat 2 112 0 270 290 8 61 chr5 166948742 166948873 -36136659 - MIR SINE MIR -50 212 89 330 266 32 11 chr5 166949205 166949299 -36136233 - MLT1L LTR MaLR -42 573 478 241 311 107 0 chr5 166949463 166949566 -36135966 - MLT1L LTR MaLR -416 199 86 2109 91 0 44 chr5 166949774 166950097 -36135435 + AluSc SINE Alu 1 310 0 280 250 44 0 chr5 166950245 166950313 -36135219 - L2 LINE L2 0 3272 3202 549 241 85 40 chr5 166950811 166951010 -36134522 - MIR SINE MIR -32 230 23 459 305 39 8 chr5 166951012 166951140 -36134392 + MER5A DNA MER1_type 4 135 -54 210 239 51 77 chr5 166951805 166951922 -36133610 - MIR3 SINE MIR -9 199 86 2178 135 30 16 chr5 166951926 166952296 -36133236 + THE1C LTR MaLR 1 375 0 544 236 90 7 chr5 166952499 166952847 -36132685 - MER113 DNA MER1_type? -85 436 5 389 339 68 8 chr5 166952850 166953086 -36132446 + MIR SINE MIR 10 259 -3 953 230 139 18 chr5 166953298 166953680 -36131852 + Charlie4a DNA MER1_type 81 508 0 273 98 0 0 chr5 166953855 166953896 -36131636 + (A)n Simple_repeat Simple_repeat 1 41 0 1880 138 48 21 chr5 166954507 166954841 -36130691 - MER61A LTR ERV1 0 343 1 2403 99 29 3 chr5 166954841 166955186 -36130346 - MER61A-int LTR ERV1 0 5217 4864 * 18675 105 27 14 chr5 166955179 166958477 -36127055 - MER61A-int LTR ERV1 -391 6072 1320 3269 167 53 30 chr5 166958470 166959197 -36126335 - MER61A-int LTR ERV1 -4440 777 1 * 1797 166 54 18 chr5 166959197 166959528 -36126004 - MER61A LTR ERV1 0 343 1 195 383 28 19 chr5 166959637 166959744 -36125788 - MIR SINE MIR -111 151 44 183 293 40 27 chr5 166959765 166959840 -36125692 + L2 LINE L2 2651 2726 -588 29 0 0 0 chr5 166960050 166960079 -36125453 + AT_rich Low_complexity Low_complexity 1 29 0 263 318 46 100 chr5 166960209 166960558 -36124974 + L2 LINE L2 2942 3271 -1 189 74 0 0 chr5 166960648 166960675 -36124857 + (A)n Simple_repeat Simple_repeat 1 27 0 217 290 11 32 chr5 166961263 166961356 -36124176 + CT-rich Low_complexity Low_complexity 4 94 0 252 255 153 10 chr5 166962611 166962709 -36122823 + MIR SINE MIR 147 258 -4 954 218 81 0 chr5 166962829 166963026 -36122506 + MER58A DNA MER1_type 11 223 -1 3611 160 55 46 chr5 166963962 166964738 -36120794 + LTR1 LTR ERV1 3 785 0 24 0 0 0 chr5 166965509 166965533 -36119999 + AT_rich Low_complexity Low_complexity 1 24 0 448 232 28 42 chr5 166965724 166965866 -36119666 - L1MA10 LINE L1 -15 6319 6180 2408 234 40 23 chr5 166965877 166966523 -36119009 + L1ME1 LINE L1 5271 5927 -239 1044 232 63 16 chr5 166966619 166966938 -36118594 + MER93a LTR ERV1 67 400 -2 613 210 7 0 chr5 166967052 166967195 -36118337 + L1MA10 LINE L1 6188 6331 -3 217 146 0 24 chr5 166967985 166968026 -36117506 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 3745 169 35 27 chr5 166969240 166970050 -36115482 + L1MC2 LINE L1 5443 7720 -65 1987 136 0 14 chr5 166970062 166970389 -36115143 - AluSx SINE Alu 0 323 1 2633 172 27 36 chr5 166970642 166971229 -36114303 - L1MA10 LINE L1 -11 6323 5742 5465 190 42 13 chr5 166971230 166972470 -36113062 + L1 LINE L1 2933 4208 -1938 314 158 0 0 chr5 166972470 166972521 -36113011 + L1MC2 LINE L1 6280 6336 -8 431 18 18 0 chr5 166972642 166972698 -36112834 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1877 135 26 35 chr5 166974180 166974492 -36111040 + AluJo SINE Alu 1 309 -3 220 301 21 21 chr5 166974547 166974640 -36110892 + MIR3 SINE MIR 115 207 -1 * 887 298 46 0 chr5 166974632 166974870 -36110662 + MIR SINE MIR 12 260 -2 797 224 9 66 chr5 166975817 166976045 -36109487 + MER20 DNA MER1_type 5 219 0 333 273 113 27 chr5 166976071 166976221 -36109311 + MIR SINE MIR 87 249 -13 333 333 60 0 chr5 166976308 166976476 -36109056 + L2 LINE L2 2212 2389 -925 294 340 102 55 chr5 166976729 166977218 -36108314 + L2 LINE L2 2461 2972 -342 317 291 87 39 chr5 166977242 166977369 -36108163 - L2 LINE L2 -6 3266 3134 501 242 133 0 chr5 166977669 166977789 -36107743 - MIR SINE MIR -42 220 85 228 267 33 56 chr5 166978004 166978184 -36107348 + L1ME LINE L1 5758 5933 -188 256 226 0 107 chr5 166979099 166979183 -36106349 + MIR SINE MIR 93 167 -95 198 0 0 0 chr5 166979259 166979281 -36106251 + (ATG)n Simple_repeat Simple_repeat 3 24 0 * 256 162 15 15 chr5 166979279 166979347 -36106185 + GA-rich Low_complexity Low_complexity 1 68 0 251 278 113 43 chr5 166979391 166979506 -36106026 + L2 LINE L2 3191 3313 0 238 367 0 28 chr5 166980324 166980433 -36105099 - MER5A DNA MER1_type -15 174 69 214 119 24 24 chr5 166980433 166980475 -36105057 + CT-rich Low_complexity Low_complexity 4 45 0 232 398 39 39 chr5 166980512 166980640 -36104892 - L3 LINE CR1 -18 1559 1432 318 274 95 71 chr5 166980896 166981064 -36104468 + L3 LINE CR1 1395 1566 -11 22 0 0 0 chr5 166981640 166981662 -36103870 + AT_rich Low_complexity Low_complexity 1 22 0 2019 256 49 20 chr5 166982152 166982788 -36102744 + MLT1E1 LTR MaLR 1 654 0 1850 165 3 7 chr5 166983442 166983733 -36101799 + AluSx SINE Alu 6 295 -17 21 36 0 0 chr5 166983845 166983873 -36101659 + AT_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr5 166984397 166984441 -36101091 + AT_rich Low_complexity Low_complexity 1 44 0 303 205 107 41 chr5 166984546 166984668 -36100864 + L1MC4 LINE L1 6620 6749 -1293 214 245 19 0 chr5 166984946 166984999 -36100533 + MIR SINE MIR 96 149 -113 351 0 0 0 chr5 166985282 166985321 -36100211 + (TC)n Simple_repeat Simple_repeat 2 40 0 535 312 138 0 chr5 166985451 166985669 -36099863 + MIR SINE MIR 15 262 0 668 183 8 8 chr5 166985695 166985821 -36099711 + FLAM_C SINE Alu 9 134 -9 195 255 21 0 chr5 167036995 167037042 -36048490 + L2 LINE L2 3216 3263 -9 198 222 0 0 chr5 167037460 167037514 -36048018 + (TA)n Simple_repeat Simple_repeat 2 55 0 279 81 0 0 chr5 167037527 167037564 -36047968 - MADE1 DNA Mariner -35 45 9 335 313 104 8 chr5 167038066 167038200 -36047332 + MIR SINE MIR 15 161 -101 202 339 71 18 chr5 167038402 167038514 -36047018 - MIR3 SINE MIR -25 183 66 21 82 0 0 chr5 167039203 167039252 -36046280 + AT_rich Low_complexity Low_complexity 1 49 0 285 366 43 36 chr5 167039668 167039947 -36045585 - L2 LINE L2 -564 2750 2470 245 143 0 20 chr5 167040388 167040437 -36045095 + (GAAAA)n Simple_repeat Simple_repeat 3 50 0 22 0 0 0 chr5 167040680 167040702 -36044830 + AT_rich Low_complexity Low_complexity 1 22 0 226 332 139 15 chr5 167041045 167041304 -36044228 + L3 LINE CR1 869 1159 -418 204 40 0 0 chr5 167041627 167041652 -36043880 + (TG)n Simple_repeat Simple_repeat 2 26 0 1495 211 13 67 chr5 167041903 167042277 -36043255 - MLT1A2 LTR MaLR -20 354 1 24 0 0 0 chr5 167042292 167042316 -36043216 + AT_rich Low_complexity Low_complexity 1 24 0 354 199 85 173 chr5 167042316 167042657 -36042875 + L1MEc LINE L1 1937 2247 -4149 794 235 14 38 chr5 167042658 167042697 -36042835 - MLT2D LTR ERVL 0 414 376 459 0 0 0 chr5 167042697 167042748 -36042784 + (TG)n Simple_repeat Simple_repeat 1 51 0 794 235 14 38 chr5 167042748 167042921 -36042611 - MLT2D LTR ERVL -38 376 207 478 59 29 0 chr5 167042927 167042995 -36042537 - MSTC LTR MaLR -4 424 355 8276 205 30 17 chr5 167042995 167044048 -36041484 + L1PA13 LINE L1 156 1194 -5603 2339 47 47 10 chr5 167044048 167044348 -36041184 + AluY SINE Alu 1 311 0 8276 205 30 17 chr5 167044348 167046640 -36038892 + L1PA13 LINE L1 1194 4003 -2794 1651 199 18 3 chr5 167046623 167046954 -36038578 + L1PA13 LINE L1 4372 4707 -2090 * 3847 92 9 21 chr5 167046948 167047464 -36038068 - L1PA10 LINE L1 -326 5842 5332 2123 113 3 3 chr5 167047464 167047756 -36037776 - AluSg SINE Alu -18 292 1 3847 92 9 21 chr5 167047756 167047805 -36037727 - L1PA10 LINE L1 -836 5332 5284 24 53 0 0 chr5 167048250 167048288 -36037244 + AT_rich Low_complexity Low_complexity 1 38 0 2768 10 0 0 chr5 167048575 167048882 -36036650 + AluY SINE Alu 1 307 -4 24 32 0 0 chr5 167049077 167049108 -36036424 + AT_rich Low_complexity Low_complexity 1 31 0 1814 210 48 0 chr5 167049238 167049610 -36035922 - MLT1B LTR MaLR 0 390 1 2237 107 3 0 chr5 167049810 167050110 -36035422 + AluSp SINE Alu 1 301 -12 21 71 0 0 chr5 167050341 167050383 -36035149 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr5 167050402 167050435 -36035097 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr5 167050542 167050572 -36034960 + AT_rich Low_complexity Low_complexity 1 30 0 2038 141 10 13 chr5 167050805 167051118 -36034414 + AluSx SINE Alu 1 312 0 217 328 94 0 chr5 167051210 167051274 -36034258 - L2 LINE L2 -40 3232 3163 1822 152 152 34 chr5 167051793 167052175 -36033357 - MSTA LTR MaLR -1 427 1 4280 148 33 17 chr5 167052175 167052999 -36032533 - MSTA-int LTR MaLR 0 1580 12 31 68 0 0 chr5 167053227 167053286 -36032246 + AT_rich Low_complexity Low_complexity 1 59 0 2139 123 21 51 chr5 167053686 167054061 -36031471 + THE1B LTR MaLR 1 364 0 1368 193 75 44 chr5 167054197 167054783 -36030749 - MER67C LTR ERV1 -8 506 1 322 315 0 18 chr5 167055745 167055856 -36029676 + L2 LINE L2 3168 3276 -37 187 341 78 18 chr5 167056074 167056241 -36029291 - MIR SINE MIR -6 256 80 24 0 0 0 chr5 167056490 167056514 -36029018 + AT_rich Low_complexity Low_complexity 1 24 0 236 310 113 23 chr5 167056552 167056897 -36028635 + L1ME4a LINE L1 5706 6081 -40 183 80 0 0 chr5 167058951 167058976 -36026556 + (TA)n Simple_repeat Simple_repeat 2 26 0 270 56 0 0 chr5 167059007 167059043 -36026489 + (TA)n Simple_repeat Simple_repeat 1 36 0 371 222 26 20 chr5 167059117 167059270 -36026262 + (CATATA)n Simple_repeat Simple_repeat 3 156 0 195 220 60 40 chr5 167060338 167060388 -36025144 - L2 LINE L2 -88 3184 3134 419 359 144 0 chr5 167061016 167061314 -36024218 - L2 LINE L2 -5 3308 2968 268 300 67 53 chr5 167061554 167061704 -36023828 - L2 LINE L2 0 3313 3162 201 424 24 6 chr5 167061938 167062103 -36023429 - L2 LINE L2 -448 2866 2699 257 317 30 10 chr5 167062915 167063016 -36022516 + MIR3 SINE MIR 93 195 -13 278 250 26 0 chr5 167064193 167064269 -36021263 - L1MEc LINE L1 -5257 1139 1062 573 318 163 20 chr5 167064278 167064721 -36020811 - L1MEc LINE L1 -5854 542 37 329 307 0 0 chr5 167065385 167065473 -36020059 - L1MC4 LINE L1 -1340 6702 6615 246 174 0 0 chr5 167065473 167065519 -36020013 + (CA)n Simple_repeat Simple_repeat 1 46 0 1778 147 23 55 chr5 167065520 167065867 -36019665 - L1MA10 LINE L1 -57 6277 5942 197 65 32 0 chr5 167065867 167065898 -36019634 + (TTTTA)n Simple_repeat Simple_repeat 1 32 0 5563 104 11 0 chr5 167065898 167066692 -36018840 - L1PA8 LINE L1 -24 6148 5346 222 317 47 13 chr5 167067234 167067319 -36018213 + MIR SINE MIR 62 148 -65 1620 174 25 50 chr5 167067700 167068096 -36017436 - L1MA7 LINE L1 0 6291 5906 762 174 12 31 chr5 167068091 167068252 -36017280 - L1 LINE L1 -2041 4105 3948 * 5193 174 27 23 chr5 167068246 167069960 -36015572 - L1MA7 LINE L1 -391 5900 4178 2834 217 8 37 chr5 167070062 167070768 -36014764 - L1MA9 LINE L1 -153 6159 5474 405 167 0 0 chr5 167070769 167070847 -36014685 + (TA)n Simple_repeat Simple_repeat 1 78 0 1582 161 3 48 chr5 167070847 167071139 -36014393 - AluJb SINE Alu -27 285 7 1057 224 35 8 chr5 167071146 167071405 -36014127 - L1MA9 LINE L1 -871 5275 5010 5517 217 69 14 chr5 167071459 167071832 -36013700 + L1 LINE L1 3390 3741 -2405 2139 89 3 0 chr5 167071832 167072123 -36013409 + AluSc SINE Alu 6 297 -12 5517 217 69 14 chr5 167072123 167073285 -36012247 + L1 LINE L1 3741 5009 -1137 1101 196 0 25 chr5 167073392 167073632 -36011900 - MER46A DNA MER2_type -2 234 1 304 330 38 24 chr5 167074499 167074667 -36010865 + MIR SINE MIR 42 212 -50 476 276 147 0 chr5 167075118 167075288 -36010244 + L2 LINE L2 1352 1546 -1768 2865 262 26 50 chr5 167075307 167076625 -36008907 + L1M4 LINE L1 3031 4316 -1830 1325 148 108 20 chr5 167076675 167076980 -36008552 - L1MA7 LINE L1 0 6291 5960 2137 253 114 12 chr5 167076980 167077938 -36007594 + L1M4 LINE L1 4317 5378 -775 416 278 66 5 chr5 167077998 167078181 -36007351 - MLT1G LTR MaLR -353 202 1 365 351 27 11 chr5 167079556 167079741 -36005791 + MLT1J2 LTR MaLR 263 450 0 2157 96 0 40 chr5 167080055 167080377 -36005155 + AluSx SINE Alu 1 309 -3 805 173 0 0 chr5 167081856 167081983 -36003549 + FLAM_C SINE Alu 1 127 -16 27 0 0 0 chr5 167081990 167082017 -36003515 + AT_rich Low_complexity Low_complexity 1 27 0 2247 90 0 10 chr5 167082336 167082636 -36002896 + AluSq SINE Alu 1 297 -16 1941 165 10 35 chr5 167082637 167083036 -36002496 - L1MB3 LINE L1 -2 6181 5793 754 199 6 48 chr5 167083102 167083268 -36002264 - L1MB3 LINE L1 -379 5792 5634 2026 127 0 36 chr5 167083281 167083589 -36001943 - AluSx SINE Alu -13 299 3 26 50 0 0 chr5 167083625 167083665 -36001867 + AT_rich Low_complexity Low_complexity 1 40 0 254 341 72 29 chr5 167083703 167083841 -36001691 + L3 LINE CR1 745 888 -689 447 347 201 3 chr5 167083847 167084135 -36001397 - L3 LINE CR1 -893 684 340 290 228 215 38 chr5 167085135 167085293 -36000239 - MER102b DNA MER1_type 0 341 156 1988 163 0 6 chr5 167085300 167085613 -35999919 - AluSx SINE Alu -1 311 1 340 316 78 26 chr5 167085965 167086158 -35999374 + L3 LINE CR1 275 477 -1100 414 254 46 23 chr5 167086196 167086326 -35999206 + L3 LINE CR1 643 775 -802 270 318 85 58 chr5 167086356 167086545 -35998987 - MIR3 SINE MIR -6 202 9 258 357 71 0 chr5 167086824 167086936 -35998596 - L2 LINE L2 -2 3311 3192 29 70 0 0 chr5 167088174 167088231 -35997301 + AT_rich Low_complexity Low_complexity 1 57 0 203 246 0 58 chr5 167089250 167089319 -35996213 + GA-rich Low_complexity Low_complexity 2 66 0 2377 97 0 0 chr5 167089842 167090152 -35995380 + AluSg SINE Alu 1 310 0 238 263 0 0 chr5 167090992 167091049 -35994483 + (ATG)n Simple_repeat Simple_repeat 2 58 0 387 307 131 0 chr5 167091062 167091238 -35994294 - MIR SINE MIR -13 249 51 252 354 95 7 chr5 167091661 167091808 -35993724 + MIR3 SINE MIR 45 204 -4 339 320 142 18 chr5 167092230 167092455 -35993077 + MIR SINE MIR 10 262 0 255 346 244 26 chr5 167093363 167093519 -35992013 - MIR3 SINE MIR -8 200 11 219 170 0 0 chr5 167093590 167093637 -35991895 + A-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 167093991 167094012 -35991520 + AT_rich Low_complexity Low_complexity 1 21 0 502 286 101 25 chr5 167094017 167094216 -35991316 + MIR SINE MIR 45 258 -4 297 143 0 36 chr5 167094688 167094744 -35990788 + HsTC2 DNA Tc2 30 83 -1815 207 0 0 0 chr5 167094745 167094768 -35990764 + (TG)n Simple_repeat Simple_repeat 2 24 0 1743 106 12 0 chr5 167095272 167095517 -35990015 + AluSq SINE Alu 1 248 -65 254 352 41 21 chr5 167095582 167095727 -35989805 - MER5A DNA MER1_type -7 182 35 383 327 24 30 chr5 167095777 167095945 -35989587 + MIR3 SINE MIR 22 188 -20 192 248 90 83 chr5 167096913 167097046 -35988486 - MIR3 SINE MIR -39 169 36 195 222 0 0 chr5 167097673 167097718 -35987814 + (TA)n Simple_repeat Simple_repeat 2 46 0 244 326 22 0 chr5 167097726 167097815 -35987717 + L1MC4 LINE L1 6615 6705 -1337 232 250 0 0 chr5 167097817 167097869 -35987663 + (TATG)n Simple_repeat Simple_repeat 4 55 0 323 269 0 11 chr5 167097870 167098045 -35987487 + (TATATG)n Simple_repeat Simple_repeat 6 178 0 354 291 0 0 chr5 167098053 167098225 -35987307 + (TA)n Simple_repeat Simple_repeat 2 173 0 249 330 21 21 chr5 167099316 167099413 -35986119 - MIR SINE MIR -76 132 36 368 338 34 0 chr5 167099887 167100035 -35985497 - MER117 DNA MER1_type -17 180 28 515 243 0 0 chr5 167100090 167100193 -35985339 + FLAM_A SINE Alu 18 120 -22 31 26 0 0 chr5 167100196 167100234 -35985298 + AT_rich Low_complexity Low_complexity 1 38 0 608 71 71 6 chr5 167100234 167100403 -35985129 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 103 60 26 chr5 167100415 167100531 -35985001 + (TA)n Simple_repeat Simple_repeat 1 120 0 183 136 15 30 chr5 167100557 167100623 -35984909 + (TA)n Simple_repeat Simple_repeat 1 65 0 356 212 0 56 chr5 167100639 167100818 -35984714 + (TA)n Simple_repeat Simple_repeat 1 169 0 2005 74 57 10 chr5 167100926 167101222 -35984310 - AluY SINE Alu -1 310 1 21 36 0 0 chr5 167102024 167102052 -35983480 + AT_rich Low_complexity Low_complexity 1 28 0 297 399 39 0 chr5 167102909 167103062 -35982470 + MIR3 SINE MIR 6 164 -44 646 295 86 70 chr5 167103607 167104149 -35981383 - L2 LINE L2 -11 3302 2756 580 294 55 10 chr5 167104405 167104606 -35980926 + MIR SINE MIR 4 213 -49 1913 158 0 7 chr5 167104953 167105251 -35980281 - AluSx SINE Alu -16 296 1 6779 68 3 2 chr5 167105713 167107007 -35978525 + L1PA7 LINE L1 4856 6150 -4 258 32 0 0 chr5 167107423 167107454 -35978078 + (CA)n Simple_repeat Simple_repeat 2 32 0 403 252 31 16 chr5 167108142 167108269 -35977263 - L1M4 LINE L1 -1562 4584 4456 4575 236 50 12 chr5 167109522 167110912 -35974620 - L1M4 LINE L1 -1683 4463 3022 346 245 39 0 chr5 167111451 167111553 -35973979 + L1MC4 LINE L1 6598 6703 -1339 3645 146 50 22 chr5 167112445 167113123 -35972409 - L1PB4 LINE L1 -13 6143 5447 1444 152 21 43 chr5 167113123 167113685 -35971847 - L1P5 LINE L1 -632 5524 4971 221 224 35 47 chr5 167114483 167114568 -35970964 + GA-rich Low_complexity Low_complexity 2 85 0 791 355 61 28 chr5 167114682 167115175 -35970357 + LTR33 LTR ERVL 6 514 -7 23 0 0 0 chr5 167115973 167115996 -35969536 + AT_rich Low_complexity Low_complexity 1 23 0 2198 253 97 37 chr5 167116234 167117329 -35968203 + L1MEc LINE L1 49 1234 -5162 181 277 54 62 chr5 167117709 167117839 -35967693 + MIR SINE MIR 63 191 -71 218 267 188 0 chr5 167117839 167117940 -35967592 + L2 LINE L2 3193 3312 -1 423 342 114 19 chr5 167118087 167118394 -35967138 - L2 LINE L2 -128 3185 2850 293 82 20 0 chr5 167119671 167119720 -35965812 + (GA)n Simple_repeat Simple_repeat 2 51 0 41761 38 29 2 chr5 167120438 167126426 -35959106 + L1PA3 LINE L1 4 6155 0 30 0 0 0 chr5 167126472 167126502 -35959030 + AT_rich Low_complexity Low_complexity 1 30 0 1935 150 61 9 chr5 167126577 167126923 -35958609 - THE1B LTR MaLR 0 364 1 329 241 0 9 chr5 167127006 167127114 -35958418 + (TATG)n Simple_repeat Simple_repeat 4 110 0 212 374 12 12 chr5 167127357 167127440 -35958092 - L3 LINE CR1 -5 1572 1490 353 324 76 33 chr5 167127454 167127729 -35957803 - L3 LINE CR1 -230 1347 1061 274 211 0 18 chr5 167127735 167127792 -35957740 - L3 LINE CR1 -637 940 885 225 373 52 13 chr5 167129330 167129483 -35956049 - L2 LINE L2 -557 2757 2599 377 298 37 45 chr5 167129908 167130230 -35955302 + L1ME4a LINE L1 5642 5965 -156 187 289 144 19 chr5 167130758 167130862 -35954670 + L2 LINE L2 3126 3242 -71 31 44 0 0 chr5 167130879 167130924 -35954608 + AT_rich Low_complexity Low_complexity 1 45 0 180 111 0 0 chr5 167131360 167131387 -35954145 + (A)n Simple_repeat Simple_repeat 1 27 0 22 70 0 0 chr5 167132217 167132260 -35953272 + AT_rich Low_complexity Low_complexity 1 43 0 186 374 81 37 chr5 167133764 167134010 -35951522 + L2 LINE L2 2646 2902 -412 229 280 40 13 chr5 167134113 167134188 -35951344 + L2 LINE L2 3196 3272 0 13408 193 19 25 chr5 167135077 167138092 -35947440 - L1 LINE L1 -909 6656 3197 1850 152 3 34 chr5 167138092 167138414 -35947118 - AluSx SINE Alu 0 312 1 13408 193 19 25 chr5 167138414 167138563 -35946969 - L1 LINE L1 -4368 3197 3049 513 165 0 11 chr5 167138562 167138653 -35946879 - L1MB7 LINE L1 -276 5908 5819 * 798 221 55 11 chr5 167138731 167138912 -35946620 - L1M4b LINE L1 -6655 204 16 413 276 53 0 chr5 167138912 167139064 -35946468 - L1MB7 LINE L1 -729 5441 5282 296 209 12 0 chr5 167140283 167140369 -35945163 + (TA)n Simple_repeat Simple_repeat 1 87 0 21 57 0 0 chr5 167140399 167140434 -35945098 + AT_rich Low_complexity Low_complexity 1 35 0 4471 126 18 7 chr5 167140841 167141691 -35943841 - L1PA14 LINE L1 -208 7391 6535 403 254 0 36 chr5 167141826 167141936 -35943596 - L1PA14 LINE L1 -1027 6557 6452 11431 28 0 0 chr5 167141937 167144053 -35941479 - L1PA2 LINE L1 -2 6153 4037 6204 40 1 0 chr5 167144053 167144821 -35940711 + L1PA2 LINE L1 3276 4044 -2102 * 15020 221 21 16 chr5 167144817 167148676 -35936856 - L1PA14 LINE L1 -1123 6461 2586 3438 244 20 44 chr5 167148736 167149744 -35935788 - L1PA14 LINE L1 -5874 1707 1 26 50 0 0 chr5 167150385 167150425 -35935107 + AT_rich Low_complexity Low_complexity 1 40 0 240 35 0 0 chr5 167150662 167150691 -35934841 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 964 98 0 0 chr5 167150693 167150816 -35934716 - AluSp/q SINE Alu -24 289 167 646 144 18 0 chr5 167151058 167151169 -35934363 + MER49 LTR ERV1 182 294 -629 1356 235 17 17 chr5 167151204 167151549 -35933983 + MER4D LTR ERV1 549 893 -10 405 366 45 12 chr5 167151732 167151978 -35933554 - MIR SINE MIR -1 261 8 390 235 82 71 chr5 167152205 167152375 -35933157 - MIR3 SINE MIR -6 202 31 292 242 0 16 chr5 167152389 167152451 -35933081 + MER31-int LTR ERV1 596 656 -6145 304 242 121 47 chr5 167152522 167152671 -35932861 + MER31-int LTR ERV1 1346 1505 -4826 518 218 5 114 chr5 167152718 167152911 -35932621 + MER31-int LTR ERV1 263 434 -4502 1923 226 42 48 chr5 167152995 167153316 -35932216 + MER31-int LTR ERV1 863 1185 -3751 2217 98 0 7 chr5 167153316 167153611 -35931921 - AluSc SINE Alu -16 293 1 1923 226 42 48 chr5 167153611 167153641 -35931891 + MER31-int LTR ERV1 1185 1214 -3722 2032 123 47 49 chr5 167153641 167154006 -35931526 - THE1B LTR MaLR 0 364 1 1923 226 42 48 chr5 167154006 167154294 -35931238 + MER31-int LTR ERV1 1214 1499 -3437 5884 175 66 15 chr5 167154352 167154673 -35930859 + L1 LINE L1 4022 4325 -1821 844 200 167 61 chr5 167154673 167155003 -35930529 + MLT1A1 LTR MaLR 1 365 0 5884 175 66 15 chr5 167155003 167155787 -35929745 + L1 LINE L1 4325 5207 -939 217 0 61 0 chr5 167155787 167155820 -35929712 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5884 175 66 15 chr5 167155820 167156023 -35929509 + L1 LINE L1 5207 5398 -748 861 229 108 34 chr5 167156023 167156411 -35929121 + MER31-int LTR ERV1 1752 2168 -2768 250 336 0 92 chr5 167156913 167157044 -35928488 - L2 LINE L2 -18 3295 3177 261 0 0 0 chr5 167157108 167157137 -35928395 + (T)n Simple_repeat Simple_repeat 1 29 0 284 330 0 0 chr5 167157356 167157447 -35928085 + MIR SINE MIR 116 206 -56 234 62 0 0 chr5 167158285 167158317 -35927215 + (CA)n Simple_repeat Simple_repeat 1 32 0 2417 184 97 0 chr5 167160456 167160912 -35924620 + MLT1D LTR MaLR 6 505 0 27 62 0 0 chr5 167161409 167161457 -35924075 + AT_rich Low_complexity Low_complexity 1 48 0 2175 56 70 0 chr5 167161472 167161757 -35923775 - AluY SINE Alu -6 305 1 593 268 40 86 chr5 167161805 167162156 -35923376 - L1ME3A LINE L1 -271 5899 5565 29 28 0 0 chr5 167162185 167162221 -35923311 + AT_rich Low_complexity Low_complexity 1 36 0 350 243 17 121 chr5 167162281 167162454 -35923078 - L1ME3A LINE L1 -1217 4929 4775 327 326 62 10 chr5 167162550 167162743 -35922789 + L1MC4a LINE L1 6217 6419 -1389 * 573 237 41 61 chr5 167162742 167163056 -35922476 - L1MC/D LINE L1 -2197 5611 5264 315 258 11 34 chr5 167163204 167163335 -35922197 - L1MC/D LINE L1 -1103 5043 4921 22 56 0 0 chr5 167163895 167163931 -35921601 + AT_rich Low_complexity Low_complexity 1 36 0 1622 176 11 4 chr5 167164300 167164579 -35920953 + AluJo SINE Alu 1 281 -31 25 31 0 0 chr5 167164687 167164719 -35920813 + AT_rich Low_complexity Low_complexity 1 32 0 31440 113 13 60 chr5 167164842 167165494 -35920038 - L1PA7 LINE L1 -22 6132 5451 2411 66 7 7 chr5 167165494 167165797 -35919735 - AluY SINE Alu -8 303 1 31440 113 13 60 chr5 167165797 167171579 -35913953 - L1PA7 LINE L1 -703 5451 9 2484 199 84 51 chr5 167172743 167173327 -35912205 - MER77 LTR ERV1 -2 603 1 608 159 25 6 chr5 167173925 167174082 -35911450 + CT-rich Low_complexity Low_complexity 3 162 0 365 123 15 0 chr5 167174132 167174197 -35911335 + CT-rich Low_complexity Low_complexity 3 68 0 260 274 48 0 chr5 167175047 167175109 -35910423 + Charlie8 DNA MER1_type 1353 1417 -1000 284 294 28 46 chr5 167176438 167176547 -35908985 + MIR SINE MIR 19 125 -83 445 269 45 50 chr5 167177103 167177304 -35908228 + MLT1K LTR MaLR 333 532 -56 1207 135 5 5 chr5 167177524 167177717 -35907815 + L1 LINE L1 3986 4178 -1968 195 388 96 21 chr5 167178032 167178416 -35907116 + L2 LINE L2 325 737 -2577 201 132 0 0 chr5 167178961 167178999 -35906533 + (TA)n Simple_repeat Simple_repeat 2 39 0 251 229 29 29 chr5 167179342 167179412 -35906120 - MIR SINE MIR -28 234 165 2462 110 43 17 chr5 167180004 167180421 -35905111 - MSTA LTR MaLR 0 428 1 411 364 26 15 chr5 167181401 167181596 -35903936 - MIR SINE MIR -31 231 35 259 224 104 0 chr5 167181916 167181983 -35903549 + MER5A DNA MER1_type 39 112 -77 459 293 14 50 chr5 167182197 167182337 -35903195 + MIR SINE MIR 7 141 -121 201 205 24 24 chr5 167182378 167182461 -35903071 + (TTA)n Simple_repeat Simple_repeat 2 84 0 445 215 139 6 chr5 167182922 167183094 -35902438 - MER5C DNA MER1_type -6 318 124 2458 32 6 45 chr5 167184750 167185063 -35900469 - AluY SINE Alu -10 301 1 34 89 0 0 chr5 167185382 167185472 -35900060 + AT_rich Low_complexity Low_complexity 1 90 0 357 268 89 76 chr5 167185520 167185677 -35899855 + MER63A DNA MER1_type 50 208 -2 450 233 79 53 chr5 167185711 167185900 -35899632 + L1M4 LINE L1 5139 5332 -814 1165 75 6 0 chr5 167185900 167186061 -35899471 + LTR43 LTR ERV1 441 602 0 189 0 0 0 chr5 167186432 167186453 -35899079 + (CAA)n Simple_repeat Simple_repeat 1 21 0 336 279 99 0 chr5 167186455 167186566 -35898966 + MIR SINE MIR 66 187 -75 695 160 0 8 chr5 167187286 167187405 -35898127 - MSTB LTR MaLR -7 419 302 1189 236 163 44 chr5 167188827 167189301 -35896231 - MER77 LTR ERV1 -4 601 175 2364 97 0 3 chr5 167189772 167190082 -35895450 + AluSg SINE Alu 1 309 -1 4735 157 35 2 chr5 167190627 167191464 -35894068 + Tigger1 DNA MER2_type 1555 2418 0 298 336 122 35 chr5 167191527 167191961 -35893571 - L3 LINE CR1 0 1577 1106 408 255 43 77 chr5 167192451 167192659 -35892873 - L2 LINE L2 0 3313 3113 650 284 83 43 chr5 167193020 167193368 -35892164 + L2 LINE L2 2940 3301 -12 428 352 52 20 chr5 167193440 167193690 -35891842 + L3 LINE CR1 1167 1424 -153 323 287 25 25 chr5 167193799 167193956 -35891576 + MER103 DNA DNA 8 164 -2 1099 122 12 0 chr5 167194290 167194454 -35891078 - MER57A LTR ERV1 -237 166 1 1300 198 64 26 chr5 167194459 167194772 -35890760 + MLT1B LTR MaLR 66 390 0 21 0 0 0 chr5 167194836 167194857 -35890675 + AT_rich Low_complexity Low_complexity 1 21 0 1092 211 23 52 chr5 167194858 167195204 -35890328 - L1MA8 LINE L1 -2 6289 5954 * 1249 205 36 18 chr5 167195181 167195459 -35890073 - L1M3e LINE L1 -6741 289 7 231 88 0 0 chr5 167195506 167195540 -35889992 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 167196946 167196969 -35888563 + AT_rich Low_complexity Low_complexity 1 23 0 481 138 0 0 chr5 167196983 167197048 -35888484 + MER75B DNA T2_type 2 66 -177 2081 119 143 13 chr5 167197083 167197462 -35888070 - MSTA LTR MaLR 0 428 1 1384 69 27 0 chr5 167198019 167198207 -35887325 + MER75B DNA T2_type 51 243 0 298 323 18 50 chr5 167199534 167199661 -35885871 + MIR SINE MIR 61 183 -61 2064 181 27 47 chr5 167199798 167200241 -35885291 + Tigger2a DNA MER2_type 1 434 0 345 348 73 0 chr5 167200280 167200458 -35885074 - MIR SINE MIR -70 192 2 2297 122 33 28 chr5 167200950 167201312 -35884220 - THE1B LTR MaLR 0 364 1 433 309 78 41 chr5 167201344 167201639 -35883893 + MLT1I LTR MaLR 102 407 -2 493 322 75 5 chr5 167203457 167203656 -35881876 + MIR SINE MIR 40 252 -10 449 181 63 18 chr5 167205303 167205432 -35880100 + MIR3 SINE MIR 66 197 -11 289 115 16 16 chr5 167205900 167205961 -35879571 + (CA)n Simple_repeat Simple_repeat 2 62 0 702 324 65 51 chr5 167206125 167206637 -35878895 - L3 LINE CR1 -75 1502 984 12019 31 5 0 chr5 167207605 167209815 -35875717 - L1PA3 LINE L1 -3 6152 3936 10935 57 0 31 chr5 167209816 167211268 -35874264 + L1P LINE L1 1 1407 -4739 21 0 0 0 chr5 167211328 167211349 -35874183 + AT_rich Low_complexity Low_complexity 1 21 0 256 252 221 8 chr5 167212260 167212391 -35873141 - MIR3 SINE MIR -19 189 31 23 33 0 0 chr5 167212815 167212845 -35872687 + AT_rich Low_complexity Low_complexity 1 30 0 1196 241 101 11 chr5 167214171 167214549 -35870983 + L1MC4 LINE L1 7254 7665 -377 189 0 0 0 chr5 167214551 167214572 -35870960 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3996 168 84 22 chr5 167214638 167215864 -35869668 - L1MB7 LINE L1 -43 6141 4840 2859 155 30 0 chr5 167215860 167216357 -35869175 + L1MA7 LINE L1 5257 5768 -523 * 29302 34 4 0 chr5 167216356 167220703 -35864829 - L1PA4 LINE L1 -2 6153 1794 2924 80 0 0 chr5 167220701 167221076 -35864456 - L1PA4 LINE L1 -5770 376 2 * 2952 118 33 25 chr5 167221095 167221610 -35863922 + L1MA7 LINE L1 5773 6291 0 366 213 0 0 chr5 167221661 167221736 -35863796 - L1MB7 LINE L1 -1356 4790 4716 353 224 0 0 chr5 167221756 167221832 -35863700 - L1MB7 LINE L1 -1538 4608 4533 209 254 84 14 chr5 167222234 167222305 -35863227 + MIR SINE MIR 84 159 -103 2892 149 2 14 chr5 167223111 167223601 -35861931 - MER66B LTR ERV1 0 486 3 553 295 42 11 chr5 167223603 167223793 -35861739 + MIR SINE MIR 67 262 0 1414 147 43 140 chr5 167223847 167224268 -35861264 - MER31B LTR ERV1 -82 384 5 2094 141 0 0 chr5 167224269 167224566 -35860966 + AluSx SINE Alu 1 297 -15 190 383 65 0 chr5 167224579 167224686 -35860846 + L2 LINE L2 3200 3313 0 235 289 53 53 chr5 167224688 167224802 -35860730 - MIR SINE MIR -73 135 22 578 322 48 26 chr5 167225660 167225933 -35859599 - L3 LINE CR1 -5 1572 1294 260 326 20 0 chr5 167226551 167226649 -35858883 + MIR SINE MIR 163 262 0 251 259 65 74 chr5 167226803 167226911 -35858621 + MIR SINE MIR 49 155 -107 225 312 26 13 chr5 167226907 167226984 -35858548 + MIR SINE MIR 11 88 -174 * 195 69 0 0 chr5 167227244 167227273 -35858259 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 391 291 55 42 chr5 167227469 167227634 -35857898 - MIR SINE MIR -15 247 81 378 309 28 45 chr5 167228645 167228823 -35856709 - L3 LINE CR1 -3 1574 1400 24 0 0 0 chr5 167229119 167229143 -35856389 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 167229263 167229285 -35856247 + AT_rich Low_complexity Low_complexity 1 22 0 345 240 66 25 chr5 167230263 167230384 -35855148 - L2 LINE L2 -4 3309 3184 411 357 120 32 chr5 167230856 167231139 -35854393 - L2 LINE L2 0 3272 2965 1443 168 3 129 chr5 167231189 167231546 -35853986 + AluJb SINE Alu 1 312 0 212 289 178 30 chr5 167231794 167231991 -35853541 + L2 LINE L2 2826 3051 -221 497 301 118 22 chr5 167233496 167233725 -35851807 + MIR SINE MIR 4 254 -8 21 0 0 0 chr5 167234028 167234049 -35851483 + AT_rich Low_complexity Low_complexity 1 21 0 190 309 53 64 chr5 167234052 167234146 -35851386 + L2 LINE L2 3150 3242 -30 23 33 0 0 chr5 167235115 167235145 -35850387 + AT_rich Low_complexity Low_complexity 1 30 0 700 286 29 0 chr5 167235615 167235821 -35849711 + MIR SINE MIR 51 262 0 358 351 134 27 chr5 167235854 167236116 -35849416 - L3 LINE CR1 -56 1521 1232 250 281 34 0 chr5 167236122 167236211 -35849321 - MIR SINE MIR -7 255 164 202 347 82 10 chr5 167236229 167236327 -35849205 + L2 LINE L2 3189 3293 -20 223 325 73 24 chr5 167236377 167236500 -35849032 - MIR SINE MIR -131 131 3 503 270 15 29 chr5 167237469 167237606 -35847926 + MIR SINE MIR 72 206 -56 360 336 26 53 chr5 167238020 167238246 -35847286 - L3 LINE CR1 -4 1573 1354 526 315 77 22 chr5 167238883 167239105 -35846427 + MIR SINE MIR 3 236 -26 2362 165 21 37 chr5 167239125 167239556 -35845976 - MSTB LTR MaLR -2 424 1 503 349 56 28 chr5 167239769 167240021 -35845511 + MIR SINE MIR 1 259 -3 675 243 148 5 chr5 167240473 167240675 -35844857 - MIR SINE MIR -30 232 2 364 246 123 69 chr5 167241245 167241448 -35844084 - L2 LINE L2 -922 2392 2179 287 336 45 15 chr5 167242118 167242252 -35843280 - L3 LINE CR1 -61 1516 1379 24 85 0 0 chr5 167242637 167242696 -35842836 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr5 167243065 167243088 -35842444 + AT_rich Low_complexity Low_complexity 1 23 0 1926 218 23 6 chr5 167243263 167243749 -35841783 - L1 LINE L1 -850 5296 4803 2452 177 13 72 chr5 167243753 167244374 -35841158 + L1MA10 LINE L1 5750 6333 -1 1318 363 24 37 chr5 167244459 167245161 -35840371 - MER115 DNA AcHobo 0 693 1 202 200 0 0 chr5 167245249 167245289 -35840243 + (TTG)n Simple_repeat Simple_repeat 2 41 0 612 225 9 0 chr5 167245566 167245677 -35839855 - MER2 DNA MER2_type -1 344 233 10178 35 0 0 chr5 167245778 167247009 -35838523 - L1P LINE L1 -830 5316 4086 261 155 52 0 chr5 167247066 167247124 -35838408 - MER2 DNA MER2_type -134 211 151 558 226 43 100 chr5 167247124 167247354 -35838178 + MER8 DNA MER2_type 1 217 -22 270 157 0 20 chr5 167247311 167247362 -35838170 - Tigger2a DNA MER2_type -370 64 15 * 876 172 14 7 chr5 167247361 167247506 -35838026 - MER2 DNA MER2_type -198 147 2 405 316 24 61 chr5 167248147 167248359 -35837173 - L3 LINE CR1 -4 1573 1370 385 244 13 0 chr5 167248362 167248440 -35837092 + FLAM_A SINE Alu 5 83 -50 207 333 0 0 chr5 167248475 167248526 -35837006 - L2 LINE L2 -37 3235 3185 532 284 55 33 chr5 167248569 167248752 -35836780 + MIR SINE MIR 1 187 -75 444 277 231 7 chr5 167248752 167249034 -35836498 - L3 LINE CR1 -232 1345 1001 306 0 0 0 chr5 167249067 167249101 -35836431 + (TTA)n Simple_repeat Simple_repeat 3 36 0 5588 23 0 0 chr5 167249101 167249746 -35835786 - L1PA4 LINE L1 -18 6137 5493 2309 106 0 0 chr5 167250075 167250376 -35835156 - AluSx SINE Alu -11 301 1 13512 137 37 28 chr5 167250694 167252133 -35833399 + Tigger1 DNA MER2_type 1 1474 -944 2217 117 3 0 chr5 167252133 167252440 -35833092 + AluSg SINE Alu 1 308 -2 13512 137 37 28 chr5 167252440 167253395 -35832137 + Tigger1 DNA MER2_type 1474 2418 0 196 298 0 18 chr5 167253517 167253574 -35831958 - MIR3 SINE MIR 0 208 153 292 290 83 65 chr5 167253697 167253866 -35831666 - MIR3 SINE MIR -35 173 2 525 295 26 0 chr5 167254510 167254666 -35830866 - MIR3 SINE MIR -13 195 36 477 333 0 31 chr5 167255096 167255258 -35830274 - MIR3 SINE MIR -24 184 28 369 305 0 0 chr5 167255518 167255623 -35829909 - MIR SINE MIR -71 137 33 240 226 29 118 chr5 167255729 167255831 -35829701 - MIR3 SINE MIR -6 202 110 242 366 67 0 chr5 167258251 167258385 -35827147 + MIR SINE MIR 12 154 -108 774 272 111 66 chr5 167258386 167258900 -35826632 - MLT1H1 LTR MaLR -18 537 1 2218 146 42 5 chr5 167259036 167259441 -35826091 - L1MB3 LINE L1 -7 6176 5757 265 157 0 0 chr5 167259465 167259516 -35826016 - L1MB2 LINE L1 -2 6169 6119 1314 107 9 9 chr5 167259530 167259746 -35825786 - L1MA5 LINE L1 0 6300 6085 1143 108 54 0 chr5 167259746 167259931 -35825601 + L1MA5 LINE L1 5750 5944 -356 2992 162 103 2 chr5 167259938 167260512 -35825020 - L1MB2 LINE L1 -49 6122 5491 306 270 0 0 chr5 167260517 167260591 -35824941 + MIR SINE MIR 189 262 0 1620 174 35 120 chr5 167261030 167261076 -35824456 + MSTD LTR MaLR 1 49 -347 1950 157 123 8 chr5 167261076 167261458 -35824074 + MSTA LTR MaLR 3 428 0 1620 174 35 120 chr5 167261458 167261843 -35823689 + MSTD LTR MaLR 49 395 -1 303 263 144 8 chr5 167261969 167262087 -35823445 - L2 LINE L2 0 3272 3139 1202 213 132 8 chr5 167262167 167262524 -35823008 + L1MA10 LINE L1 5927 6327 -7 340 265 122 41 chr5 167262948 167263095 -35822437 - L2 LINE L2 0 3272 3114 524 291 35 78 chr5 167263704 167263986 -35821546 + MLT1K LTR MaLR 312 581 -7 629 344 74 38 chr5 167264543 167265040 -35820492 + MLT1K LTR MaLR 7 521 -67 3164 107 19 8 chr5 167265431 167265917 -35819615 + L1MA3 LINE L1 5808 6298 -7 446 257 99 7 chr5 167266017 167266169 -35819363 + MER117 DNA MER1_type 1 166 -31 273 214 29 57 chr5 167266268 167266338 -35819194 - MER20B DNA MER1_type -699 84 17 2267 220 73 6 chr5 167266998 167267520 -35818012 - MER90 LTR ERV1 0 614 58 305 305 66 30 chr5 167267550 167267717 -35817815 + L2 LINE L2 3139 3311 -2 197 338 59 0 chr5 167267737 167267805 -35817727 + L2 LINE L2 3149 3220 -52 21 0 0 0 chr5 167268130 167268151 -35817381 + AT_rich Low_complexity Low_complexity 1 21 0 482 171 0 0 chr5 167268165 167268241 -35817291 + AluJb SINE Alu 201 276 -36 519 45 0 0 chr5 167268241 167268307 -35817225 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 237 320 10 20 chr5 167268501 167268601 -35816931 + MIR SINE MIR 88 186 -76 1571 132 0 29 chr5 167268884 167269126 -35816406 - AluSx SINE Alu -20 292 58 193 284 49 25 chr5 167269206 167269287 -35816245 + MIR SINE MIR 66 148 -114 232 320 13 0 chr5 167269405 167269483 -35816049 + L2 LINE L2 3231 3309 -4 530 360 23 9 chr5 167269570 167269784 -35815748 + MIR SINE MIR 29 245 -17 3772 189 76 11 chr5 167270803 167272185 -35813347 + L1MB7 LINE L1 4665 6140 -44 472 236 36 0 chr5 167272563 167272673 -35812859 - MER81 DNA DNA 0 114 1 336 314 16 18 chr5 167272703 167272897 -35812635 - MIR SINE MIR -13 249 14 760 148 111 6 chr5 167323073 167323235 -35762297 - L1MB3 LINE L1 0 6183 6005 408 314 68 32 chr5 167323598 167323850 -35761682 - L1M4 LINE L1 -1429 4717 4457 1171 118 0 0 chr5 167324238 167324429 -35761103 - AluSg/x SINE Alu 0 324 134 2384 87 3 0 chr5 167324429 167324738 -35760794 - AluSq SINE Alu -3 310 1 498 321 9 56 chr5 167325055 167325270 -35760262 + L2 LINE L2 3044 3248 -24 998 198 75 5 chr5 167326541 167326753 -35758779 + MIR SINE MIR 33 259 -3 319 239 20 15 chr5 167328089 167328185 -35757347 + MIR SINE MIR 1 98 -110 23 0 0 0 chr5 167328361 167328384 -35757148 + AT_rich Low_complexity Low_complexity 1 23 0 302 267 84 8 chr5 167328561 167328692 -35756840 + MIR SINE MIR 66 206 -56 1368 171 34 58 chr5 167328721 167328917 -35756615 - Tigger1 DNA MER2_type 0 2418 2229 2220 96 0 0 chr5 167328917 167329223 -35756309 + AluSx SINE Alu 1 306 0 1368 171 34 58 chr5 167329223 167329317 -35756215 - Tigger1 DNA MER2_type -189 2229 2134 * 4445 134 41 20 chr5 167329312 167329597 -35755935 - Tigger1 DNA MER2_type -1665 753 475 2357 77 3 0 chr5 167329597 167329896 -35755636 + AluY SINE Alu 1 300 -11 4445 134 41 20 chr5 167329896 167330348 -35755184 - Tigger1 DNA MER2_type -1943 475 1 1205 147 52 35 chr5 167330449 167330681 -35754851 + MER46A DNA MER2_type 1 236 0 280 157 214 43 chr5 167331885 167331955 -35753577 + MER3 DNA MER1_type 9 90 -119 207 269 167 0 chr5 167332182 167332260 -35753272 + MIR3 SINE MIR 93 183 -25 649 204 164 36 chr5 167332804 167333024 -35752508 + MIR SINE MIR 14 261 -1 558 170 0 0 chr5 167334687 167334781 -35750751 + FLAM_A SINE Alu 22 115 -27 23 33 0 0 chr5 167335596 167335626 -35749906 + AT_rich Low_complexity Low_complexity 1 30 0 2113 101 3 29 chr5 167337104 167337411 -35748121 - AluSq SINE Alu 0 313 15 243 259 19 0 chr5 167337573 167337627 -35747905 + MIR SINE MIR 56 110 -152 266 341 110 17 chr5 167337664 167337837 -35747695 - MIR3 SINE MIR -4 204 16 917 183 226 4 chr5 167338422 167338701 -35746831 - MER58B DNA MER1_type 0 341 1 250 260 22 72 chr5 167338922 167339077 -35746455 + MIR SINE MIR 37 181 -81 2019 95 8 0 chr5 167339174 167339437 -35746095 - AluSq SINE Alu -48 265 1 22 0 0 0 chr5 167339462 167339484 -35746048 + GC_rich Low_complexity Low_complexity 1 22 0 336 269 108 81 chr5 167339631 167339817 -35745715 - MIR SINE MIR -48 214 24 26 74 0 0 chr5 167340396 167340450 -35745082 + AT_rich Low_complexity Low_complexity 1 54 0 245 300 56 42 chr5 167340473 167340615 -35744917 + MIR SINE MIR 37 181 -62 191 259 60 103 chr5 167340958 167341074 -35744458 - MIR SINE MIR -68 140 30 654 327 20 20 chr5 167341183 167341431 -35744101 + MIR SINE MIR 9 256 -6 23 0 0 0 chr5 167341442 167341465 -35744067 + AT_rich Low_complexity Low_complexity 1 23 0 257 317 33 17 chr5 167341641 167341761 -35743771 - MER113 DNA MER1_type? -109 412 291 197 282 162 26 chr5 167341970 167342087 -35743445 - MIR SINE MIR -81 181 49 180 111 0 0 chr5 167343435 167343462 -35742070 + (TATG)n Simple_repeat Simple_repeat 2 28 0 318 227 27 27 chr5 167343732 167343807 -35741725 + MER81 DNA DNA 4 78 -36 816 252 141 35 chr5 167344774 167345115 -35740417 + L3 LINE CR1 1190 1566 -11 334 276 67 0 chr5 167345564 167345669 -35739863 - MIR SINE MIR -63 145 34 380 302 88 36 chr5 167346275 167346467 -35739065 - MIR SINE MIR -44 218 17 1037 183 74 0 chr5 167346508 167346710 -35738822 + MER20 DNA MER1_type 2 218 -1 697 265 176 4 chr5 167347073 167347594 -35737938 + LTR50 LTR ERVL 83 786 -9 1429 273 54 9 chr5 167347603 167348054 -35737478 - L2 LINE L2 -310 3003 2534 743 264 32 9 chr5 167348213 167348429 -35737103 + MIR SINE MIR 33 253 -9 25 65 0 0 chr5 167348433 167348479 -35737053 + AT_rich Low_complexity Low_complexity 1 46 0 386 210 0 25 chr5 167348491 167348572 -35736960 + MIR SINE MIR 68 146 -116 261 83 0 0 chr5 167348579 167348615 -35736917 + (ATG)n Simple_repeat Simple_repeat 1 36 0 363 253 46 92 chr5 167349154 167349328 -35736204 - MIR SINE MIR -13 249 84 2139 153 82 31 chr5 167349736 167350149 -35735383 - Tigger2a DNA MER2_type 0 434 1 206 324 9 63 chr5 167350581 167350692 -35734840 + MIR SINE MIR 21 125 -137 412 234 0 26 chr5 167350829 167350987 -35734545 + MIR SINE MIR 18 235 -27 309 244 52 17 chr5 167351730 167351902 -35733630 + (TTATA)n Simple_repeat Simple_repeat 2 179 0 416 210 15 33 chr5 167351928 167352216 -35733316 + (TTATA)n Simple_repeat Simple_repeat 1 283 0 430 286 159 36 chr5 167352357 167352956 -35732576 - L2 LINE L2 -3 3310 2624 624 161 0 17 chr5 167352956 167353074 -35732458 - MLT1D LTR MaLR 0 505 390 399 203 0 0 chr5 167353074 167353153 -35732379 - L2 LINE L2 -749 2565 2487 8281 189 85 46 chr5 167353193 167354855 -35730677 + L1MC1 LINE L1 274 1870 -4556 271 129 129 32 chr5 167354855 167354917 -35730615 - Tigger5 DNA MER2_type -3 2320 2253 * 309 179 0 18 chr5 167354887 167354943 -35730589 - Tigger5 DNA MER2_type -2268 55 1 * 8281 189 85 46 chr5 167354943 167357150 -35728382 + L1MC1 LINE L1 1896 4389 -2037 2237 113 0 31 chr5 167357180 167357499 -35728033 - AluSc SINE Alu 0 309 1 5587 188 24 21 chr5 167357536 167359434 -35726098 + L1MC1 LINE L1 4711 6613 0 360 346 69 16 chr5 167360579 167360767 -35724765 + MIR SINE MIR 33 230 -32 2614 103 5 11 chr5 167362742 167363119 -35722413 + THE1C LTR MaLR 1 375 0 249 323 97 11 chr5 167363847 167364050 -35721482 + MIR SINE MIR 3 216 -46 219 69 0 0 chr5 167364058 167364087 -35721445 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 258 341 0 0 chr5 167364095 167364183 -35721349 - MIR SINE MIR 0 262 175 646 323 45 5 chr5 167364230 167364450 -35721082 - MIR SINE MIR -4 258 30 736 207 9 95 chr5 167364470 167364702 -35720830 - MER58C DNA MER1_type -3 212 1 2183 125 0 7 chr5 167364714 167365010 -35720522 - AluSx SINE Alu -18 294 1 311 370 72 7 chr5 167365020 167365158 -35720374 - MIR SINE MIR -115 147 1 275 215 15 62 chr5 167365298 167365363 -35720169 + L2 LINE L2 3206 3267 -5 311 206 15 29 chr5 167366269 167366337 -35719195 + L2 LINE L2 3201 3267 -5 2316 83 3 13 chr5 167367037 167367339 -35718193 + AluY SINE Alu 1 299 -12 257 246 31 0 chr5 167367766 167367831 -35717701 - MIR SINE MIR -130 132 66 368 291 0 71 chr5 167368741 167368833 -35716699 + MIR SINE MIR 21 101 -161 1783 87 8 4 chr5 167368833 167369075 -35716457 + AluSx SINE Alu 51 293 -19 368 291 0 71 chr5 167369075 167369123 -35716409 + MIR SINE MIR 101 151 -111 407 300 57 19 chr5 167369129 167369339 -35716193 - MIR SINE MIR 0 262 45 191 231 77 26 chr5 167369344 167369422 -35716110 + MIR SINE MIR 172 253 -9 613 290 49 37 chr5 167369779 167370024 -35715508 - MIR SINE MIR 0 262 15 241 203 58 14 chr5 167370034 167370103 -35715429 - MIR SINE MIR -63 145 74 232 345 22 116 chr5 167370654 167370929 -35714603 - L2 LINE L2 -4 3268 3020 194 333 0 0 chr5 167371073 167371133 -35714399 - L2 LINE L2 -556 2758 2699 299 285 118 48 chr5 167371534 167371720 -35713812 + MIR SINE MIR 47 245 -17 690 312 156 23 chr5 167371740 167372176 -35713356 + L2 LINE L2 2808 3301 -12 210 247 182 0 chr5 167372187 167372264 -35713268 + MIR SINE MIR 165 255 -7 201 283 38 0 chr5 167372797 167372850 -35712682 - MIR3 SINE MIR -49 159 105 25 51 0 0 chr5 167373528 167373567 -35711965 + AT_rich Low_complexity Low_complexity 1 39 0 1763 169 18 0 chr5 167374393 167374672 -35710860 - AluSx SINE Alu -7 305 22 440 329 27 7 chr5 167376009 167376158 -35709374 - MIR3 SINE MIR -25 183 32 1016 337 161 21 chr5 167377323 167377954 -35707578 - L3 LINE CR1 0 1577 825 270 0 0 0 chr5 167377954 167377984 -35707548 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1016 337 161 21 chr5 167377984 167378099 -35707433 - L3 LINE CR1 -752 825 727 183 354 115 0 chr5 167378198 167378294 -35707238 - L3 LINE CR1 -896 681 575 496 183 0 17 chr5 167378969 167379089 -35706443 + GA-rich Low_complexity Low_complexity 3 120 0 522 316 4 19 chr5 167379163 167379392 -35706140 - MIR SINE MIR -1 261 1 546 209 139 35 chr5 167380428 167380600 -35704932 + MIR3 SINE MIR 16 205 -3 342 153 0 0 chr5 167381384 167381443 -35704089 + GA-rich Low_complexity Low_complexity 3 61 0 359 246 43 102 chr5 167381463 167381650 -35703882 + MER5A DNA MER1_type 7 182 -7 291 112 0 128 chr5 167381677 167381802 -35703730 + (GA)n Simple_repeat Simple_repeat 2 110 0 761 213 67 39 chr5 167382359 167382641 -35702891 - MER113 DNA MER1_type? -217 304 15 541 327 83 0 chr5 167383150 167383355 -35702177 - MIR SINE MIR -4 258 37 369 244 11 11 chr5 167384138 167384228 -35701304 + L1MC4 LINE L1 6614 6703 -1339 673 303 49 23 chr5 167384742 167385006 -35700526 - L3 LINE CR1 -202 1375 1105 1088 193 42 9 chr5 167385485 167385697 -35699835 - MER20 DNA MER1_type 0 219 1 248 246 298 9 chr5 167385734 167385848 -35699684 - MIR3 SINE MIR -25 183 37 402 288 92 18 chr5 167385860 167386023 -35699509 + MER5B DNA MER1_type 1 175 -3 580 324 25 29 chr5 167386632 167386876 -35698656 - MIR SINE MIR -12 250 8 520 186 177 0 chr5 167387210 167387323 -35698209 + MER45B DNA AcHobo 1 133 -907 * 1348 188 27 119 chr5 167387322 167387800 -35697732 + MER45B DNA AcHobo 607 1040 0 293 216 132 68 chr5 167388229 167388419 -35697113 - L2 LINE L2 -5 3308 3107 813 241 16 5 chr5 167388719 167388910 -35696622 + MER3 DNA MER1_type 17 209 0 313 160 0 0 chr5 167388867 167388917 -35696615 - MER3 DNA MER1_type -119 90 41 * 321 232 0 0 chr5 167389506 167389575 -35695957 - L2 LINE L2 -31 3282 3214 2132 87 7 7 chr5 167389823 167390111 -35695421 + AluSg SINE Alu 1 288 -22 355 296 80 0 chr5 167390282 167390370 -35695162 - MER5A DNA MER1_type -85 104 10 724 294 73 21 chr5 167390466 167390755 -35694777 + L3 LINE CR1 1187 1490 -87 406 104 0 65 chr5 167391182 167391259 -35694273 - Alu SINE Alu -3 309 238 268 287 23 0 chr5 167391504 167391591 -35693941 - L1M4 LINE L1 -2023 4123 4035 187 302 70 58 chr5 167392491 167392577 -35692955 - L2 LINE L2 -23 3249 3163 224 290 73 65 chr5 167392903 167393027 -35692505 + L3 LINE CR1 448 572 -1005 552 263 54 19 chr5 167393053 167393228 -35692304 + MIR SINE MIR 8 190 -64 198 236 28 56 chr5 167393340 167393412 -35692120 + L3 LINE CR1 632 701 -876 930 276 62 56 chr5 167393625 167393671 -35691861 - L2 LINE L2 -898 2416 2372 2279 182 14 21 chr5 167393671 167394100 -35691432 + MSTB LTR MaLR 1 426 0 930 276 62 56 chr5 167394100 167394521 -35691011 - L2 LINE L2 -942 2372 1946 496 317 56 43 chr5 167394626 167395282 -35690250 + L1MC4a LINE L1 5256 5920 -1888 342 376 24 8 chr5 167395555 167395680 -35689852 - L2 LINE L2 0 3313 3187 2218 86 0 4 chr5 167395803 167396083 -35689449 + AluY SINE Alu 23 301 -10 13597 56 2 0 chr5 167396088 167401538 -35683994 + L1PA5 LINE L1 574 6152 -2 210 309 134 27 chr5 167402535 167402684 -35682848 + L2 LINE L2 2943 3107 -165 398 295 159 14 chr5 167402834 167403041 -35682491 - MIR SINE MIR -19 243 7 622 299 39 16 chr5 167403058 167403312 -35682220 - MIR SINE MIR 0 262 3 373 343 17 11 chr5 167404057 167404235 -35681297 + A-rich Low_complexity Low_complexity 1 179 0 386 248 5 163 chr5 167404486 167404688 -35680844 + MER5A DNA MER1_type 20 189 0 623 242 142 0 chr5 167404987 167405177 -35680355 + L2 LINE L2 1795 2011 -1303 1371 276 144 2 chr5 167405204 167405623 -35679909 - L1ME3 LINE L1 -30 6201 5665 351 0 0 0 chr5 167405623 167405662 -35679870 + (TG)n Simple_repeat Simple_repeat 2 40 0 1371 276 144 2 chr5 167405662 167405859 -35679673 - L1ME3 LINE L1 -566 5665 5497 1804 264 89 47 chr5 167406313 167406652 -35678880 - L1ME3 LINE L1 -719 5514 5191 1933 137 3 3 chr5 167406652 167406937 -35678595 + AluSx SINE Alu 1 285 -27 1804 264 89 47 chr5 167406937 167407002 -35678530 - L1ME3 LINE L1 -1042 5191 5130 1630 175 45 7 chr5 167407002 167407293 -35678239 - AluJo SINE Alu -10 302 1 1804 264 89 47 chr5 167407293 167408414 -35677118 - L1ME3 LINE L1 -1103 5130 3914 316 321 0 27 chr5 167408509 167408621 -35676911 + LTR16A LTR ERVL 77 185 -265 576 272 71 30 chr5 167408727 167409924 -35675608 - L1ME3 LINE L1 -3700 2521 1265 337 196 10 10 chr5 167409973 167410070 -35675462 + (TA)n Simple_repeat Simple_repeat 2 98 0 2358 108 0 0 chr5 167410316 167410621 -35674911 - AluSg SINE Alu -5 305 1 291 89 0 0 chr5 167410904 167410949 -35674583 + MADE1 DNA Mariner 34 78 -2 2036 286 119 47 chr5 167411160 167412398 -35673134 + L2 LINE L2 1985 3298 -15 1066 310 143 22 chr5 167412410 167413088 -35672444 + L2 LINE L2 2530 3313 0 2648 199 33 46 chr5 167413541 167414175 -35671357 - MER82 DNA MER2_type -7 646 21 731 291 47 24 chr5 167414490 167414744 -35670788 + MIR SINE MIR 3 262 0 870 241 85 45 chr5 167415244 167415691 -35669841 + MLT2B1 LTR ERVL 1 508 -12 2150 134 30 35 chr5 167415922 167416288 -35669244 + THE1B LTR MaLR 1 364 0 524 257 60 92 chr5 167416368 167416562 -35668970 + MIR SINE MIR 46 234 -28 2085 182 25 52 chr5 167416562 167417041 -35668491 - MER31B LTR ERV1 0 466 1 524 257 60 92 chr5 167417041 167417064 -35668468 + MIR SINE MIR 234 256 -6 276 283 9 62 chr5 167417426 167417616 -35667916 + GA-rich Low_complexity Low_complexity 1 180 0 22 0 0 0 chr5 167417659 167417681 -35667851 + AT_rich Low_complexity Low_complexity 1 22 0 193 272 132 35 chr5 167418045 167418159 -35667373 + MER5A DNA MER1_type 21 145 -44 313 315 81 0 chr5 167418202 167418313 -35667219 + MLT1I LTR MaLR 40 159 -250 1743 200 45 41 chr5 167419749 167420214 -35665318 + MLT1C LTR MaLR 1 467 0 3400 142 7 7 chr5 167420592 167421178 -35664354 + L1MA4 LINE L1 5708 6293 -7 23 33 0 0 chr5 167421178 167421208 -35664324 + AT_rich Low_complexity Low_complexity 1 30 0 1737 183 10 7 chr5 167421627 167421917 -35663615 - AluSx SINE Alu -21 291 1 563 240 33 16 chr5 167422884 167422927 -35662605 - MIR SINE MIR -48 214 173 502 103 26 0 chr5 167422927 167423005 -35662527 - MADE1 DNA Mariner 0 80 1 563 240 33 16 chr5 167423005 167423144 -35662388 - MIR SINE MIR -89 173 29 2306 134 28 14 chr5 167423277 167423636 -35661896 + THE1B LTR MaLR 1 364 0 10999 106 15 23 chr5 167423636 167425229 -35660303 + THE1B-int LTR MaLR 1 1580 0 2006 159 45 14 chr5 167425230 167425582 -35659950 + THE1B LTR MaLR 2 364 0 369 320 136 18 chr5 167425582 167425854 -35659678 - L3 LINE CR1 -75 1502 1199 986 162 112 10 chr5 167425855 167426052 -35659480 + MER20 DNA MER1_type 3 219 0 321 346 30 23 chr5 167426310 167426443 -35659089 + L2 LINE L2 3138 3271 -1 776 198 167 0 chr5 167426802 167426964 -35658568 - MER5A DNA MER1_type 0 189 1 369 272 42 74 chr5 167427673 167427890 -35657642 + MIR SINE MIR 49 258 -4 17716 170 10 5 chr5 167428175 167434382 -35651150 + L1PA14 LINE L1 1348 7590 -9 384 77 0 0 chr5 167434394 167434446 -35651086 + (TA)n Simple_repeat Simple_repeat 1 52 0 40 37 0 0 chr5 167434449 167434503 -35651029 + AT_rich Low_complexity Low_complexity 1 54 0 480 263 29 109 chr5 167434977 167435251 -35650281 - MIR SINE MIR -8 254 3 396 300 53 97 chr5 167435791 167436151 -35649381 + L2 LINE L2 2925 3268 -4 391 331 8 0 chr5 167436677 167436804 -35648728 + L3 LINE CR1 1113 1240 -337 259 337 0 0 chr5 167437215 167437313 -35648219 + GA-rich Low_complexity Low_complexity 2 99 0 281 265 128 0 chr5 167437314 167437416 -35648116 + MLT1K LTR MaLR 395 509 -79 588 125 0 0 chr5 167438243 167438339 -35647193 + (TC)n Simple_repeat Simple_repeat 1 96 0 187 297 62 0 chr5 167439264 167439328 -35646204 - L3 LINE CR1 -1189 388 321 244 292 46 0 chr5 167439381 167439446 -35646086 + L2 LINE L2 3169 3236 -77 583 323 139 30 chr5 167439625 167440186 -35645346 - L2 LINE L2 -337 2977 2356 346 373 19 24 chr5 167440266 167440475 -35645057 - MIR SINE MIR -54 208 1 1523 70 0 0 chr5 167441332 167441603 -35643929 + AluY SINE Alu 98 368 0 711 194 8 0 chr5 167441615 167441739 -35643793 + FLAM_C SINE Alu 3 127 -16 378 245 82 6 chr5 167441921 167442080 -35643452 + Tigger8 DNA MER2_type 205 375 -291 302 379 0 8 chr5 167442889 167443013 -35642519 + GA-rich Low_complexity Low_complexity 4 126 0 420 289 0 0 chr5 167443466 167443570 -35641962 + MER5B DNA MER1_type 1 104 -74 368 219 48 9 chr5 167443592 167443697 -35641835 - MER53 DNA DNA -1 188 80 259 152 22 0 chr5 167443710 167443756 -35641776 - MER5B DNA MER1_type -124 54 8 254 227 0 34 chr5 167443893 167443981 -35641551 + L1ME4a LINE L1 5944 6028 -93 2419 157 32 21 chr5 167444646 167445117 -35640415 + LTR45B LTR ERV1 14 489 0 261 252 176 17 chr5 167445626 167445651 -35639881 - MIR3 SINE MIR -11 197 177 1418 113 45 5 chr5 167445651 167445872 -35639660 + MER30 DNA MER1_type 1 230 0 261 252 176 17 chr5 167445872 167445965 -35639567 - MIR3 SINE MIR -31 177 60 290 351 158 5 chr5 167446304 167446506 -35639026 + L3 LINE CR1 826 1058 -519 249 280 160 10 chr5 167446535 167446635 -35638897 + L2 LINE L2 2921 3035 -278 199 351 26 13 chr5 167446740 167446817 -35638715 + L2 LINE L2 3177 3254 -18 300 287 49 16 chr5 167446936 167447058 -35638474 + L3 LINE CR1 1170 1295 -282 458 242 160 51 chr5 167447061 167447317 -35638215 - L2 LINE L2 0 3313 3030 373 281 50 29 chr5 167447336 167447363 -35638169 + L3 LINE CR1 1319 1344 -233 772 247 23 0 chr5 167447363 167447537 -35637995 - MER5B DNA MER1_type 0 178 1 373 281 50 29 chr5 167447537 167447648 -35637884 + L3 LINE CR1 1344 1460 -117 2962 185 17 58 chr5 167447661 167448066 -35637466 + L1MB4 LINE L1 5435 5855 -325 2281 78 4 0 chr5 167448066 167448377 -35637155 - AluSp SINE Alu 0 312 1 2962 185 17 58 chr5 167448377 167448662 -35636870 + L1MB4 LINE L1 5855 6093 -87 2104 115 56 6 chr5 167448662 167449000 -35636532 - L1PA15 LINE L1 -3 6162 5808 2962 185 17 58 chr5 167449000 167449085 -35636447 + L1MB4 LINE L1 6093 6180 0 206 276 92 10 chr5 167449094 167449192 -35636340 + L3 LINE CR1 1467 1572 -5 225 0 0 0 chr5 167449949 167449974 -35635558 + (CA)n Simple_repeat Simple_repeat 1 25 0 2279 116 0 0 chr5 167450014 167450324 -35635208 - AluSx SINE Alu 0 312 3 385 360 0 0 chr5 167450343 167450454 -35635078 + MIR3 SINE MIR 50 160 -48 594 261 34 11 chr5 167450457 167450633 -35634899 - L2 LINE L2 -6 3307 3128 375 308 151 0 chr5 167450645 167450791 -35634741 - MER5A DNA MER1_type -6 183 16 941 314 235 13 chr5 167450883 167451740 -35633792 - L2 LINE L2 -238 3034 1995 274 96 68 0 chr5 167451743 167451816 -35633716 + (TA)n Simple_repeat Simple_repeat 2 79 0 1293 180 42 46 chr5 167452322 167452698 -35632834 + MER67C LTR ERV1 1 396 -243 342 260 80 40 chr5 167452715 167452865 -35632667 + MER67D LTR ERV1 356 511 -3 2332 184 10 0 chr5 167452892 167453306 -35632226 - MER47B DNA MER2_type 0 418 1 430 184 23 0 chr5 167453583 167453670 -35631862 + MER89 LTR ERV1 1 89 -470 * 1373 218 16 40 chr5 167453645 167454017 -35631515 + MER89 LTR ERV1 197 559 0 180 0 0 0 chr5 167454208 167454228 -35631304 + (A)n Simple_repeat Simple_repeat 1 20 0 823 207 16 36 chr5 167454286 167454479 -35631053 - MER5A DNA MER1_type 0 189 1 434 330 53 22 chr5 167454597 167454828 -35630704 - MIR SINE MIR -13 249 16 2026 127 23 48 chr5 167455272 167455666 -35629866 - MLT1B LTR MaLR 0 390 7 347 252 53 30 chr5 167455699 167455830 -35629702 + HERV16 LTR ERVL 3358 3491 -2163 279 260 26 0 chr5 167455820 167455897 -35629635 + HERV16 LTR ERVL 3237 3315 -1681 * 447 282 86 22 chr5 167455882 167456204 -35629328 - ERVL LTR ERVL -1222 4305 3617 501 88 62 0 chr5 167456465 167456545 -35628987 + L1PA11 LINE L1 6089 6173 -1 612 310 27 15 chr5 167456608 167456869 -35628663 - ERVL LTR ERVL -2148 3506 3243 1465 307 19 19 chr5 167456913 167457480 -35628052 - ERVL LTR ERVL -2078 2918 2352 3534 89 12 0 chr5 167457580 167458096 -35627436 - L1P LINE L1 -1867 4279 3758 2378 73 0 0 chr5 167458090 167458420 -35627112 + L1PA7 LINE L1 4893 5222 -924 * 352 103 17 0 chr5 167458420 167458478 -35627054 - AluY SINE Alu -5 295 237 1493 94 5 15 chr5 167458478 167458681 -35626851 - AluY SINE Alu -110 201 1 6760 68 10 0 chr5 167458682 167459607 -35625925 + L1PA7 LINE L1 5221 6154 0 231 362 0 0 chr5 167459998 167460092 -35625440 + MIR SINE MIR 46 139 -123 401 306 36 9 chr5 167460216 167460553 -35624979 + L1M4 LINE L1 3034 3379 -2767 877 239 27 18 chr5 167461646 167461868 -35623664 + MER58A DNA MER1_type 1 224 0 1487 308 84 51 chr5 167462226 167463142 -35622390 + L2 LINE L2 2325 3281 -32 1679 168 55 6 chr5 167463155 167463483 -35622049 - MER2 DNA MER2_type 0 344 1 240 59 0 0 chr5 167463491 167463525 -35622007 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 256 374 91 18 chr5 167463529 167463748 -35621784 + L2 LINE L2 2624 2858 -456 265 315 34 0 chr5 167463819 167463908 -35621624 + L2 LINE L2 2966 3057 -215 2307 108 0 0 chr5 167464403 167464700 -35620832 + AluSg SINE Alu 1 297 -13 330 259 190 16 chr5 167465552 167465857 -35619675 + L1ME4a LINE L1 5592 5949 -172 287 273 20 27 chr5 167466261 167466411 -35619121 + (TA)n Simple_repeat Simple_repeat 1 149 0 973 316 69 31 chr5 167466837 167467521 -35618011 + L2 LINE L2 2536 3235 -78 246 287 161 0 chr5 167467987 167468074 -35617458 - L2 LINE L2 -11 3302 3202 201 108 0 0 chr5 167468427 167468464 -35617068 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 22 0 0 0 chr5 167469406 167469428 -35616104 + AT_rich Low_complexity Low_complexity 1 22 0 4654 222 41 8 chr5 167469643 167470931 -35614601 + L1 LINE L1 2929 4258 -1888 431 288 84 21 chr5 167471092 167471283 -35614249 - L1MEd LINE L1 -5415 704 502 301 389 128 5 chr5 167471294 167471685 -35613847 + L2 LINE L2 2348 2786 -528 252 0 0 0 chr5 167472279 167472307 -35613225 + (TG)n Simple_repeat Simple_repeat 2 29 0 238 222 0 0 chr5 167472356 167472410 -35613122 - MIR3 SINE MIR -5 203 150 1685 201 83 0 chr5 167473457 167473841 -35611691 + L1P LINE L1 3866 4281 -1865 1633 132 24 45 chr5 167473819 167473976 -35611556 - L1PB4 LINE L1 -222 5934 5775 * 2094 132 34 0 chr5 167473976 167474271 -35611261 - AluSx SINE Alu -7 305 1 1633 132 24 45 chr5 167474271 167474446 -35611086 - L1PB4 LINE L1 -381 5775 5609 664 286 57 15 chr5 167474448 167474754 -35610778 - AluJb SINE Alu 0 326 10 9130 63 10 3 chr5 167474880 167476188 -35609344 + L1P LINE L1 3102 4418 -1728 411 363 53 21 chr5 167476815 167477005 -35608527 + L2 LINE L2 3076 3271 -1 684 219 49 11 chr5 167477115 167477298 -35608234 + MER20 DNA MER1_type 30 219 0 2048 179 78 0 chr5 167478490 167478887 -35606645 + MSTA LTR MaLR 1 428 0 2337 112 0 0 chr5 167478923 167479226 -35606306 - AluSg SINE Alu -7 303 1 678 308 123 28 chr5 167479263 167479793 -35605739 - MLT1K LTR MaLR 0 588 9 589 247 142 5 chr5 167479809 167480136 -35605396 + LTR33 LTR ERVL 14 438 -83 225 306 59 0 chr5 167480204 167480289 -35605243 - L3 LINE CR1 -867 710 621 206 203 0 16 chr5 167480485 167480549 -35604983 + GA-rich Low_complexity Low_complexity 3 65 0 452 281 35 41 chr5 167480592 167480763 -35604769 + MIR3 SINE MIR 33 202 -6 22 35 0 0 chr5 167480839 167480868 -35604664 + AT_rich Low_complexity Low_complexity 1 29 0 1217 193 37 43 chr5 167481844 167482166 -35603366 + MER33 DNA MER1_type 1 320 -4 202 239 0 0 chr5 167483078 167483124 -35602408 + L3b LINE CR1 1238 1283 -300 338 296 35 89 chr5 167483970 167484173 -35601359 + MIR SINE MIR 19 210 -52 272 310 92 65 chr5 167485166 167485204 -35600328 + L3b LINE CR1 1284 1320 -263 207 0 0 0 chr5 167485204 167485227 -35600305 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 272 310 92 65 chr5 167485227 167485449 -35600083 + L3b LINE CR1 1320 1551 -32 205 345 9 0 chr5 167485507 167485617 -35599915 + (TAG)n Simple_repeat Simple_repeat 3 113 0 565 363 48 16 chr5 167485638 167485886 -35599646 + MIR SINE MIR 5 260 -2 2307 98 0 0 chr5 167486985 167487282 -35598250 - AluSc SINE Alu -12 297 1 321 354 7 14 chr5 167489807 167489951 -35595581 + MIR SINE MIR 3 145 -117 301 315 27 18 chr5 167490177 167490305 -35595227 + MIR SINE MIR 20 140 -68 21666 54 1 0 chr5 167491374 167494193 -35591339 - L1P LINE L1 -3324 2822 1 302 231 0 39 chr5 167494195 167494273 -35591259 - MER3 DNA MER1_type -97 112 38 496 304 111 14 chr5 167495152 167495359 -35590173 + MIR SINE MIR 3 229 -33 224 352 120 0 chr5 167495767 167495892 -35589640 + MIR3 SINE MIR 65 204 -4 207 167 0 0 chr5 167497281 167497323 -35588209 + (TA)n Simple_repeat Simple_repeat 1 42 0 782 326 123 32 chr5 167497361 167498088 -35587444 - L2 LINE L2 0 3313 2505 219 295 16 0 chr5 167498275 167498336 -35587196 + CT-rich Low_complexity Low_complexity 5 66 0 1703 131 8 8 chr5 167498791 167499043 -35586489 - AluSx SINE Alu -60 252 1 296 280 0 54 chr5 167499157 167499250 -35586282 + MIR SINE MIR 171 258 -4 496 301 17 45 chr5 167499544 167499720 -35585812 - MIR3 SINE MIR -15 193 23 1281 100 20 88 chr5 167499860 167500109 -35585423 + MLT2A2 LTR ERVL 2 233 -220 235 43 28 10 chr5 167500296 167500340 -35585192 - MSTA LTR MaLR -318 46 4 452 287 84 22 chr5 167500379 167500560 -35584972 - L2 LINE L2 -295 2977 2788 411 283 36 0 chr5 167500630 167500768 -35584764 + MLT1G3 LTR MaLR 1 143 -452 1029 237 141 27 chr5 167500768 167501144 -35584388 + MLT1G3 LTR MaLR 93 511 -19 238 279 61 25 chr5 167501713 167501910 -35583622 + MER113 DNA MER1_type? 10 213 -308 195 306 0 0 chr5 167502752 167502801 -35582731 - L2 LINE L2 -10 3303 3255 412 275 8 25 chr5 167504612 167504732 -35580800 + MIR3 SINE MIR 86 203 -5 1423 274 141 38 chr5 167505121 167505507 -35580025 + L2 LINE L2 2110 2455 -858 1906 168 26 0 chr5 167505507 167505811 -35579721 + AluJb SINE Alu 1 312 0 1423 274 141 38 chr5 167505811 167506352 -35579180 + L2 LINE L2 2455 3173 -140 252 0 0 0 chr5 167506352 167506380 -35579152 + (TA)n Simple_repeat Simple_repeat 1 28 0 1423 274 141 38 chr5 167506380 167506532 -35579000 + L2 LINE L2 3173 3308 -5 400 245 41 18 chr5 167506744 167506877 -35578655 - MIR3 SINE MIR -52 156 21 258 257 43 0 chr5 167507044 167507114 -35578418 + MLT1K LTR MaLR 127 199 -389 824 278 15 19 chr5 167507204 167507467 -35578065 + MLT1K LTR MaLR 327 588 0 283 338 75 8 chr5 167508983 167509116 -35576416 + MIR3 SINE MIR 30 171 -37 808 199 68 6 chr5 167510055 167510231 -35575301 - MER5A DNA MER1_type 0 189 3 275 314 17 23 chr5 167510312 167510487 -35575045 - MER113 DNA MER1_type? -72 449 276 297 0 0 0 chr5 167510491 167510524 -35575008 + (T)n Simple_repeat Simple_repeat 1 33 0 909 309 78 15 chr5 167510538 167511000 -35574532 - LTR16C LTR ERVL 0 491 1 704 192 73 53 chr5 167511002 167511247 -35574285 - MER113 DNA MER1_type? -266 255 6 1414 182 65 7 chr5 167511281 167511589 -35573943 - MER58B DNA MER1_type -15 326 1 498 283 29 0 chr5 167511603 167511741 -35573791 + MIR SINE MIR 47 188 -74 221 287 92 23 chr5 167512119 167512206 -35573326 - MER5A DNA MER1_type 0 189 97 403 220 76 8 chr5 167512804 167512922 -35572610 - MIR SINE MIR -48 214 89 213 262 78 92 chr5 167513133 167513274 -35572258 + MIR SINE MIR 84 222 -40 192 268 141 0 chr5 167513517 167513588 -35571944 + MIR SINE MIR 34 114 -94 2220 117 0 0 chr5 167513635 167513943 -35571589 + AluSx SINE Alu 1 308 -4 298 299 37 0 chr5 167513952 167514059 -35571473 + MIR SINE MIR 35 145 -63 259 283 28 9 chr5 167514102 167514208 -35571324 + L1MC4 LINE L1 7905 8012 -30 261 297 78 0 chr5 167514644 167514708 -35570824 + MIR SINE MIR 20 88 -174 218 305 132 0 chr5 167515126 167515261 -35570271 + MIR SINE MIR 100 257 -5 768 236 79 22 chr5 167515965 167516118 -35569414 + MER5A DNA MER1_type 1 167 -22 935 54 109 41 chr5 167516118 167516265 -35569267 - L1MA2 LINE L1 -3 6301 6145 768 236 79 22 chr5 167516265 167516289 -35569243 + MER5A DNA MER1_type 167 188 -1 737 296 8 11 chr5 167517015 167517275 -35568257 + MIR SINE MIR 2 260 -2 768 181 117 0 chr5 167517561 167517732 -35567800 + MER20 DNA MER1_type 29 219 0 38 68 0 0 chr5 167517757 167517830 -35567702 + AT_rich Low_complexity Low_complexity 1 73 0 310 279 0 136 chr5 167517959 167518099 -35567433 - MIR3 SINE MIR -9 199 79 380 236 114 53 chr5 167518558 167518695 -35566837 - MIR3 SINE MIR -31 177 28 306 247 64 39 chr5 167518923 167519121 -35566411 + MLT1L LTR MaLR 5 202 -309 458 248 272 20 chr5 167519355 167519557 -35565975 + MIR SINE MIR 2 254 -8 376 306 32 32 chr5 167519789 167519913 -35565619 - L2 LINE L2 -5 3308 3185 567 204 15 53 chr5 167519928 167520060 -35565472 - MIR3 SINE MIR -48 160 34 497 309 194 28 chr5 167520161 167520588 -35564944 + L2 LINE L2 2811 3308 -5 1044 146 80 19 chr5 167520820 167521033 -35564499 - THE1C LTR MaLR -149 226 1 543 277 32 13 chr5 167521598 167521753 -35563779 - MIR3 SINE MIR -12 196 39 213 325 61 37 chr5 167522462 167522625 -35562907 + L2 LINE L2 1843 2009 -1305 2758 13 0 0 chr5 167522873 167523173 -35562359 - AluYb8 SINE Alu -3 315 16 29 78 0 0 chr5 167523175 167523239 -35562293 + AT_rich Low_complexity Low_complexity 1 64 0 355 283 99 92 chr5 167523403 167523937 -35561595 - L1MC/D LINE L1 -583 5583 5265 1518 157 44 30 chr5 167524048 167524412 -35561120 - L1MA9 LINE L1 -5 6307 5939 1491 94 15 0 chr5 167524636 167524839 -35560693 - AluSp SINE Alu -2 311 106 22 0 0 0 chr5 167524841 167524863 -35560669 + AT_rich Low_complexity Low_complexity 1 22 0 3864 192 6 16 chr5 167525073 167525955 -35559577 - L1P LINE L1 -895 5251 4379 2918 110 8 4 chr5 167525967 167526750 -35558782 + L1PA14 LINE L1 5310 6159 -2 273 109 0 0 chr5 167527303 167527349 -35558183 + (CA)n Simple_repeat Simple_repeat 2 47 0 185 242 0 0 chr5 167528044 167528077 -35557455 - L2 LINE L2 -35 3278 3246 22 0 0 0 chr5 167528142 167528164 -35557368 + AT_rich Low_complexity Low_complexity 1 22 0 422 197 39 24 chr5 167529456 167529583 -35555949 - L1ME4a LINE L1 -3 6118 5990 2445 67 3 0 chr5 167530057 167530357 -35555175 + AluY SINE Alu 1 301 -10 312 283 105 65 chr5 167530359 167530712 -35554820 - MLT1J LTR MaLR 0 511 145 409 255 54 111 chr5 167530811 167531256 -35554276 - MLT1K LTR MaLR -70 518 83 318 195 78 123 chr5 167531491 167531645 -35553887 - HAL1b LINE L1 -445 903 757 264 297 97 41 chr5 167532007 167532202 -35553330 - L2 LINE L2 -1037 2277 2072 324 338 36 7 chr5 167532214 167532353 -35553179 - L3 LINE CR1 -2 1575 1433 864 293 4 16 chr5 167532574 167532820 -35552712 + MIR SINE MIR 10 252 -10 227 103 26 0 chr5 167532824 167532863 -35552669 + (TAA)n Simple_repeat Simple_repeat 1 40 0 322 375 46 13 chr5 167532906 167533058 -35552474 + L2 LINE L2 3112 3268 -4 293 287 11 0 chr5 167533744 167533838 -35551694 + L1ME1 LINE L1 6053 6147 -19 341 312 187 39 chr5 167534704 167535076 -35550456 - L2 LINE L2 -94 3219 2793 288 102 0 0 chr5 167535636 167535685 -35549847 + (TC)n Simple_repeat Simple_repeat 2 50 0 297 0 0 0 chr5 167535685 167535718 -35549814 + (CA)n Simple_repeat Simple_repeat 1 33 0 424 327 29 15 chr5 167536822 167537094 -35548438 - L1ME4a LINE L1 -254 5867 5592 429 337 30 24 chr5 167537364 167537533 -35547999 - L2 LINE L2 0 3272 3103 2044 199 74 19 chr5 167537971 167538444 -35547088 - MLT1D LTR MaLR 0 505 7 324 0 0 0 chr5 167538579 167538615 -35546917 + (TC)n Simple_repeat Simple_repeat 2 37 0 * 363 96 0 0 chr5 167538614 167538666 -35546866 + (TA)n Simple_repeat Simple_repeat 1 52 0 213 240 0 0 chr5 167539991 167540041 -35545491 - MIR SINE MIR -132 130 81 467 285 108 87 chr5 167540160 167540781 -35544751 - L1M2 LINE L1 -5849 1000 404 212 0 0 35 chr5 167540971 167541000 -35544532 + (TG)n Simple_repeat Simple_repeat 2 29 0 34402 31 7 1 chr5 167543283 167548697 -35536835 - L1PA3 LINE L1 0 6155 617 758 71 0 0 chr5 167548691 167548789 -35536743 - L1PA3 LINE L1 -6048 98 1 * 2202 60 46 3 chr5 167549111 167549395 -35536137 + AluY SINE Alu 1 296 -15 269 302 52 42 chr5 167549924 167550020 -35535512 - L3 LINE CR1 -1 1576 1480 756 337 102 38 chr5 167550076 167550796 -35534736 + L2 LINE L2 2487 3310 -3 574 305 34 39 chr5 167551267 167551500 -35534032 - MLT1K LTR MaLR -346 242 11 272 374 58 7 chr5 167551780 167551919 -35533613 - MIR SINE MIR -108 154 9 216 238 0 89 chr5 167552347 167552492 -35533040 - MIR SINE MIR 0 262 72 282 298 44 26 chr5 167552933 167553047 -35532485 + L2 LINE L2 3167 3282 -31 180 176 0 0 chr5 167553244 167553278 -35532254 + MIR SINE MIR 120 153 -109 2470 80 3 0 chr5 167553419 167553730 -35531802 + AluSq SINE Alu 1 312 -1 809 275 110 24 chr5 167554170 167555179 -35530353 - L1ME3A LINE L1 -202 6031 4817 2601 271 103 26 chr5 167555206 167556647 -35528885 - L1ME3A LINE L1 -1757 4458 2907 4588 199 17 54 chr5 167556651 167557162 -35528370 - L1MA10 LINE L1 -1 6333 5805 1617 206 0 0 chr5 167557162 167557458 -35528074 - AluJb SINE Alu -16 296 1 4588 199 17 54 chr5 167557458 167558277 -35527255 - L1MA10 LINE L1 -529 5805 5041 1148 183 23 36 chr5 167558261 167558562 -35526970 - L1MA10 LINE L1 -1637 4509 4213 * 373 194 21 43 chr5 167558648 167558741 -35526791 + L1MC4 LINE L1 6613 6703 -1339 21 0 0 0 chr5 167558916 167558937 -35526595 + AT_rich Low_complexity Low_complexity 1 21 0 404 287 117 44 chr5 167559023 167560151 -35525381 - L1MCa LINE L1 -4256 2140 915 266 258 0 16 chr5 167560293 167560355 -35525177 - L2 LINE L2 -4 3309 3249 1996 134 3 26 chr5 167560431 167560737 -35524795 - AluSx SINE Alu -13 299 1 207 302 0 32 chr5 167561080 167561143 -35524389 - L2 LINE L2 -10 3303 3243 633 327 8 46 chr5 167561420 167561680 -35523852 + MIR SINE MIR 13 262 0 2541 69 60 0 chr5 167561846 167562181 -35523351 - THE1A LTR MaLR 0 355 1 299 314 99 35 chr5 167562350 167562522 -35523010 + MIR SINE MIR 74 256 -6 443 286 143 48 chr5 167562673 167563127 -35522405 + L1M4 LINE L1 2918 3414 -2732 420 352 113 0 chr5 167563131 167563344 -35522188 - MIR SINE MIR -6 256 20 22 0 0 0 chr5 167563660 167563682 -35521850 + AT_rich Low_complexity Low_complexity 1 22 0 1616 247 50 31 chr5 167563933 167565031 -35520501 + L1MB8 LINE L1 1213 2493 -4464 6410 210 19 11 chr5 167565039 167566531 -35519001 - L1PB1 LINE L1 -1649 4497 2994 3554 166 35 9 chr5 167566527 167567469 -35518063 + L1PB1 LINE L1 4522 5502 -649 * 213 39 0 0 chr5 167567469 167567495 -35518037 + (TAA)n Simple_repeat Simple_repeat 2 27 0 3554 166 35 9 chr5 167567495 167567793 -35517739 + L1PB1 LINE L1 5502 5791 -360 323 113 50 0 chr5 167567803 167567883 -35517649 + (TA)n Simple_repeat Simple_repeat 1 84 0 2628 92 3 0 chr5 167567894 167568254 -35517278 + L1PB1 LINE L1 5791 6151 0 3991 243 52 41 chr5 167568392 167568489 -35517043 + L1MB8 LINE L1 2476 2570 -4387 1400 121 45 14 chr5 167568489 167568712 -35516820 + MER30 DNA MER1_type 1 230 0 3991 243 52 41 chr5 167568712 167570418 -35515114 + L1MB8 LINE L1 2570 4259 -2698 3909 211 40 14 chr5 167570389 167571445 -35514087 + L1MB8 LINE L1 5371 6398 -591 * 1994 161 6 20 chr5 167571445 167571798 -35513734 + MER7A DNA MER2_type 1 346 0 3909 211 40 14 chr5 167571798 167572244 -35513288 + L1MB8 LINE L1 6398 6919 -70 1913 174 10 42 chr5 167572244 167572647 -35512885 - MLT1B LTR MaLR 0 390 1 3909 211 40 14 chr5 167572647 167572720 -35512812 + L1MB8 LINE L1 6919 6989 0 312 250 99 81 chr5 167572984 167573156 -35512376 - L2 LINE L2 0 3313 3139 802 168 126 27 chr5 167573156 167573462 -35512070 + THE1C LTR MaLR 1 364 0 1170 301 16 6 chr5 167573539 167573936 -35511596 - L2 LINE L2 -299 3014 2616 339 309 92 24 chr5 167573996 167574245 -35511287 + HAL1 LINE L1 2186 2451 -56 22 35 0 0 chr5 167574687 167574716 -35510816 + AT_rich Low_complexity Low_complexity 1 29 0 195 162 0 0 chr5 167574954 167574991 -35510541 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 381 58 0 0 chr5 167575284 167575336 -35510196 + (GA)n Simple_repeat Simple_repeat 2 53 0 459 240 89 97 chr5 167575355 167575613 -35509919 - MER102a DNA MER1_type -14 316 61 214 299 22 75 chr5 167575732 167575866 -35509666 + MIR SINE MIR 82 208 -54 296 333 16 32 chr5 167576623 167576749 -35508783 - L2 LINE L2 -462 2852 2729 1878 133 171 11 chr5 167577040 167577409 -35508123 + MSTA LTR MaLR 1 428 0 5042 193 87 60 chr5 167577411 167577897 -35507635 + MSTA-int LTR MaLR 3 475 -1105 2026 147 0 0 chr5 167577897 167578190 -35507342 + AluSx SINE Alu 1 293 -19 5042 193 87 60 chr5 167578190 167578251 -35507281 + MSTA-int LTR MaLR 475 533 -1047 2036 137 20 3 chr5 167578251 167578551 -35506981 + AluSg SINE Alu 1 305 -5 5042 193 87 60 chr5 167578551 167579540 -35505992 + MSTA-int LTR MaLR 533 1580 0 1471 135 156 132 chr5 167579542 167579958 -35505574 + MSTA LTR MaLR 3 428 0 489 308 40 43 chr5 167581063 167581532 -35504000 + MLT1J LTR MaLR 1 506 -5 561 229 102 57 chr5 167582513 167582742 -35502790 - MLT1K LTR MaLR 0 611 374 899 317 26 26 chr5 167582903 167583294 -35502238 - MLT1I LTR MaLR 0 409 19 325 291 60 30 chr5 167583325 167583459 -35502073 - MLT1L LTR MaLR -388 227 90 648 280 39 44 chr5 167583832 167584243 -35501289 + L1ME4a LINE L1 5505 5913 -208 318 248 26 62 chr5 167586915 167587028 -35498504 - MIR SINE MIR 0 262 154 * 693 254 17 79 chr5 167587018 167587258 -35498274 - MIR SINE MIR -10 252 28 2293 110 0 0 chr5 167588410 167588710 -35496822 - AluSp SINE Alu -13 300 1 517 114 0 0 chr5 167589174 167589253 -35496279 - MER53 DNA DNA -1 188 110 216 67 0 0 chr5 167589277 167589307 -35496225 + (ATG)n Simple_repeat Simple_repeat 3 32 0 21 0 0 0 chr5 167589931 167589952 -35495580 + AT_rich Low_complexity Low_complexity 1 21 0 246 270 126 52 chr5 167590120 167590169 -35495363 + MER5A DNA MER1_type 2 46 -143 207 0 0 0 chr5 167590169 167590192 -35495340 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 246 270 126 52 chr5 167590192 167590316 -35495216 + MER5A DNA MER1_type 46 188 -1 186 289 22 0 chr5 167593452 167593497 -35492035 - MIR3 SINE MIR -10 198 153 1603 271 70 37 chr5 167594333 167595108 -35490424 + HAL1b LINE L1 80 879 -469 1296 202 0 0 chr5 167595109 167595327 -35490205 + MER58A DNA MER1_type 1 218 -6 236 279 72 9 chr5 167595467 167595578 -35489954 + HAL1b LINE L1 873 990 -358 396 255 83 14 chr5 167595612 167595757 -35489775 + HAL1b LINE L1 1193 1347 -1 880 279 113 34 chr5 167596185 167596734 -35488798 + L2 LINE L2 2713 3313 0 1848 170 28 38 chr5 167596803 167597197 -35488335 + MLT1B LTR MaLR 1 390 0 4468 194 66 27 chr5 167597354 167598355 -35487177 - MER45B DNA AcHobo 0 1040 1 361 335 26 7 chr5 167598812 167598967 -35486565 + MIR3 SINE MIR 18 175 -33 197 357 43 0 chr5 167599460 167599530 -35486002 + MIR SINE MIR 48 120 -88 798 309 120 36 chr5 167599572 167600071 -35485461 + MLT1K LTR MaLR 48 588 0 612 311 120 14 chr5 167600310 167600667 -35484865 + L2 LINE L2 2237 2631 -683 438 271 9 43 chr5 167601552 167601690 -35483842 - MIR SINE MIR -63 145 52 239 364 144 26 chr5 167602574 167602838 -35482694 + L2 LINE L2 2976 3270 -2 344 213 32 11 chr5 167603215 167603309 -35482223 - MER102b DNA MER1_type -112 229 134 189 180 0 131 chr5 167603595 167603656 -35481876 + L2 LINE L2 3254 3306 -7 9151 189 16 13 chr5 167603948 167604941 -35480591 + L1PA15 LINE L1 3390 4379 -1786 2424 82 0 3 chr5 167604941 167605246 -35480286 + AluY SINE Alu 1 304 -7 9151 189 16 13 chr5 167605246 167607022 -35478510 + L1PA15 LINE L1 4379 6161 -4 2406 112 43 8 chr5 167607026 167607401 -35478131 + L1PA15 LINE L1 5772 6159 -6 194 277 38 149 chr5 167607457 167607692 -35477840 - L2 LINE L2 -103 3169 2961 * 564 258 64 119 chr5 167607688 167607842 -35477690 - L2 LINE L2 0 3313 3152 2382 69 3 0 chr5 167607842 167608133 -35477399 - AluY SINE Alu -19 292 1 564 258 64 119 chr5 167608133 167608146 -35477386 - L2 LINE L2 -161 3152 3140 2475 79 16 24 chr5 167608146 167608515 -35477017 - L1PA10 LINE L1 -2 6166 5801 564 258 64 119 chr5 167608515 167608691 -35476841 - L2 LINE L2 -173 3140 2988 386 246 14 101 chr5 167609517 167609724 -35475808 - MER102b DNA MER1_type -2 339 151 271 271 33 57 chr5 167609784 167609906 -35475626 - MER102b DNA MER1_type -222 119 1 196 313 122 8 chr5 167609913 167610044 -35475488 - L2 LINE L2 -89 3224 3079 229 299 51 36 chr5 167610196 167610333 -35475199 + MER5A DNA MER1_type 23 161 -28 260 245 38 94 chr5 167611572 167611678 -35473854 - MIR SINE MIR -56 206 107 2165 138 3 0 chr5 167612091 167612403 -35473129 - AluSq SINE Alu 0 313 1 2565 68 0 0 chr5 167612407 167612717 -35472815 - AluY SINE Alu -1 310 1 11310 218 52 40 chr5 167613948 167614497 -35471035 - L1MA10 LINE L1 -3 7291 6750 7007 51 20 1 chr5 167614497 167615337 -35470195 - L1PA7 LINE L1 -7 6147 5274 351 44 0 0 chr5 167615337 167615382 -35470150 + (TG)n Simple_repeat Simple_repeat 2 46 0 7007 51 20 1 chr5 167615382 167616162 -35469370 - L1PA7 LINE L1 -880 5274 4511 11310 218 52 40 chr5 167616162 167621814 -35463718 - L1MA10 LINE L1 -544 6750 1 219 334 88 75 chr5 167628034 167628396 -35457136 + L3b LINE CR1 1125 1491 -92 277 312 26 0 chr5 167629120 167629217 -35456315 + MIR SINE MIR 46 143 -66 202 317 59 0 chr5 167629596 167629697 -35455835 - L3 LINE CR1 -325 1252 1146 28 61 0 0 chr5 167629708 167629757 -35455775 + AT_rich Low_complexity Low_complexity 1 49 0 292 369 8 16 chr5 167630011 167630133 -35455399 + L2 LINE L2 2766 2886 -428 204 40 0 0 chr5 167630288 167630313 -35455219 + (CTCTG)n Simple_repeat Simple_repeat 4 28 0 1007 304 80 2 chr5 167630358 167630783 -35454749 + LTR33A LTR ERVL 62 519 -4 716 329 23 10 chr5 167630920 167631227 -35454305 - MLT1I LTR MaLR -12 397 87 409 341 77 51 chr5 167631303 167631916 -35453616 + L2 LINE L2 1947 2575 -739 423 89 25 13 chr5 167631927 167632006 -35453526 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 852 174 7 21 chr5 167632006 167632150 -35453382 - AluJb SINE Alu -59 253 112 234 261 58 101 chr5 167632485 167632623 -35452909 + MIR SINE MIR 20 151 -111 331 309 115 50 chr5 167633126 167633265 -35452267 + MER5A DNA MER1_type 39 186 -3 180 0 0 0 chr5 167633353 167633373 -35452159 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 248 346 119 30 chr5 167633902 167634205 -35451327 + L2 LINE L2 2836 3165 -148 439 339 159 16 chr5 167635069 167635508 -35450024 + L2 LINE L2 1998 2499 -815 446 107 0 13 chr5 167636567 167636642 -35448890 + (TCCC)n Simple_repeat Simple_repeat 4 77 0 393 312 0 0 chr5 167636645 167636754 -35448778 - L2 LINE L2 -1 3312 3204 230 242 0 16 chr5 167637490 167637552 -35447980 + MLT1K LTR MaLR 509 569 -19 192 200 0 0 chr5 167637648 167637693 -35447839 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 428 319 158 6 chr5 167637890 167638416 -35447116 - L1MC4a LINE L1 -1876 5932 5327 195 42 0 0 chr5 167638514 167638538 -35446994 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1555 159 87 7 chr5 167638570 167638847 -35446685 - AluJb SINE Alu -13 299 1 376 355 99 0 chr5 167639349 167639521 -35446011 - MIR SINE MIR -51 211 23 195 330 11 64 chr5 167640365 167640387 -35445145 - L2 LINE L2 -38 3275 3253 219 69 0 0 chr5 167640387 167640416 -35445116 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 195 330 11 64 chr5 167640416 167640487 -35445045 - L2 LINE L2 -60 3253 3187 1036 276 42 39 chr5 167640487 167641164 -35444368 - L1ME LINE L1 -4021 2059 1400 821 156 10 26 chr5 167641165 167641390 -35444142 + CT-rich Low_complexity Low_complexity 1 221 0 229 185 31 31 chr5 167641393 167641458 -35444074 - L1M2 LINE L1 -4384 2465 2401 1060 193 56 80 chr5 167641602 167641851 -35443681 - AluJo SINE Alu -69 243 1 1769 270 71 25 chr5 167641861 167642115 -35443417 - L1ME LINE L1 -5028 1055 814 2010 130 3 19 chr5 167642115 167642431 -35443101 - AluSx SINE Alu 0 312 2 1769 270 71 25 chr5 167642431 167643171 -35442361 - L1ME LINE L1 -5269 814 18 388 245 20 0 chr5 167643334 167643432 -35442100 + MIR SINE MIR 162 261 -1 504 319 69 37 chr5 167643449 167643917 -35441615 - L2 LINE L2 -212 3060 2575 219 357 61 34 chr5 167644149 167644412 -35441120 + L2 LINE L2 2565 2834 -480 201 321 205 0 chr5 167644402 167644514 -35441018 - L2 LINE L2 -1 3271 3137 * 212 261 0 72 chr5 167644973 167645042 -35440490 - MIR SINE MIR -57 151 88 453 268 0 24 chr5 167645468 167645607 -35439925 - MIR3 SINE MIR -50 158 28 2355 91 16 0 chr5 167646288 167646596 -35438936 - AluSp SINE Alu 0 313 1 1937 194 62 28 chr5 167646640 167647109 -35438423 + MLT2B1 LTR ERVL 1 485 -35 209 167 0 37 chr5 167647111 167647165 -35438367 + (TTATA)n Simple_repeat Simple_repeat 3 54 0 198 0 0 0 chr5 167647232 167647254 -35438278 + (CA)n Simple_repeat Simple_repeat 2 23 0 383 74 0 0 chr5 167647254 167647308 -35438224 + MLT2B1 LTR ERVL 467 520 0 326 265 17 68 chr5 167647308 167647425 -35438107 - L3 LINE CR1 -158 1419 1309 247 227 102 45 chr5 167647509 167647597 -35437935 + MIR3 SINE MIR 114 206 -2 473 344 36 4 chr5 167648151 167648404 -35437128 - MIR SINE MIR 0 262 2 23 33 0 0 chr5 167648406 167648436 -35437096 + AT_rich Low_complexity Low_complexity 1 30 0 196 224 0 60 chr5 167648571 167648638 -35436894 + L2 LINE L2 3179 3241 -72 23 68 0 0 chr5 167649494 167649538 -35435994 + AT_rich Low_complexity Low_complexity 1 44 0 445 270 303 0 chr5 167649746 167649924 -35435608 - MIR SINE MIR -3 259 28 389 264 104 0 chr5 167651055 167651161 -35434371 - MIR3 SINE MIR -52 156 40 234 290 57 16 chr5 167651391 167651515 -35434017 + MER113 DNA MER1_type? 7 135 -386 317 258 109 16 chr5 167652081 167652209 -35433323 - L2 LINE L2 -13 3300 3161 3498 154 21 33 chr5 167652312 167652408 -35433124 - MER6A DNA MER2_type -260 605 509 1711 186 3 3 chr5 167652408 167652704 -35432828 - AluJo SINE Alu -16 296 1 3498 154 21 33 chr5 167652704 167653219 -35432313 - MER6A DNA MER2_type -356 509 1 321 26 0 0 chr5 167654113 167654151 -35431381 + (TC)n Simple_repeat Simple_repeat 1 38 0 402 305 75 58 chr5 167654420 167654646 -35430886 - MIR SINE MIR -12 250 21 22 35 0 0 chr5 167655491 167655520 -35430012 + AT_rich Low_complexity Low_complexity 1 29 0 288 314 14 0 chr5 167655555 167655625 -35429907 - MER2 DNA MER2_type -3 342 272 10706 173 28 15 chr5 167655635 167658132 -35427400 + L1PA12 LINE L1 1 2286 -5295 1564 122 39 0 chr5 167658132 167658362 -35427170 + L1PA14 LINE L1 5914 6152 -9 10706 173 28 15 chr5 167658362 167658381 -35427151 + L1PA12 LINE L1 2286 2303 -5278 845 146 7 21 chr5 167658416 167658560 -35426972 + L1MA5A LINE L1 6151 6292 -5 1202 166 5 33 chr5 167658576 167658787 -35426745 - MER2 DNA MER2_type -139 206 2 309 151 0 0 chr5 167658796 167658849 -35426683 + (TG)n Simple_repeat Simple_repeat 2 54 0 203 367 129 14 chr5 167658851 167658990 -35426542 + MIR3 SINE MIR 2 156 -52 327 319 111 15 chr5 167659126 167659261 -35426271 + L2 LINE L2 3125 3272 0 1713 217 84 32 chr5 167659836 167660278 -35425254 - MLT1C LTR MaLR -2 465 1 1735 177 32 91 chr5 167660288 167660694 -35424838 - MLT1C-int LTR MaLR -10 1361 980 384 259 67 26 chr5 167660737 167660974 -35424558 + L1MC/D LINE L1 5182 5429 -743 496 273 42 12 chr5 167660988 167661212 -35424320 + L1MC/D LINE L1 5543 5794 -368 332 253 22 90 chr5 167661527 167661705 -35423827 + HAL1 LINE L1 1 166 -2341 478 245 75 37 chr5 167661797 167661985 -35423547 + HAL1 LINE L1 2306 2500 -7 1019 217 132 32 chr5 167663276 167663606 -35421926 - MLT1A1 LTR MaLR 0 365 1 470 303 20 13 chr5 167664145 167664297 -35421235 + MER5B DNA MER1_type 2 154 -24 899 218 57 20 chr5 167664890 167665172 -35420360 + LTR16A LTR ERVL 121 444 -6 446 286 136 14 chr5 167665314 167665527 -35420005 - L3 LINE CR1 -470 1107 869 205 216 0 39 chr5 167665990 167666041 -35419491 - MIR3 SINE MIR -9 199 151 185 333 161 11 chr5 167666289 167666376 -35419156 - MIR SINE MIR -90 118 19 362 239 35 9 chr5 167667135 167667248 -35418284 - MIR3 SINE MIR -16 192 77 234 252 71 103 chr5 167667766 167667921 -35417611 - MIR SINE MIR -78 184 35 440 191 38 61 chr5 167668140 167668271 -35417261 + MIR SINE MIR 85 212 -50 220 268 0 36 chr5 167668631 167668687 -35416845 - MIR SINE MIR -122 86 33 185 275 25 25 chr5 167668818 167668898 -35416634 + L3 LINE CR1 1234 1313 -264 276 328 17 17 chr5 167669193 167669309 -35416223 + MIR SINE MIR 8 123 -139 359 273 11 0 chr5 167670256 167670344 -35415188 - MIR SINE MIR -41 221 133 956 306 65 36 chr5 167670456 167671056 -35414476 - L2 LINE L2 -1 3312 2675 487 250 21 14 chr5 167671347 167671491 -35414041 + MER103 DNA DNA 22 166 0 355 272 15 15 chr5 167671726 167671862 -35413670 + Charlie7 DNA MER1_type 13 148 -2464 201 175 0 0 chr5 167672321 167672361 -35413171 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2103 148 3 0 chr5 167672585 167672896 -35412636 + AluJb SINE Alu 1 312 0 247 258 31 41 chr5 167672906 167673003 -35412529 - L1ME4a LINE L1 -20 6101 6006 255 286 0 0 chr5 167673259 167673315 -35412217 + MER96B DNA MER1_type? 1 56 -361 * 574 148 114 81 chr5 167673307 167673517 -35412015 - MER96B DNA MER1_type? -119 298 82 402 294 50 31 chr5 167673594 167673754 -35411778 + MIR3 SINE MIR 3 165 -43 352 319 24 35 chr5 167673804 167673973 -35411559 + MIR3 SINE MIR 33 199 -9 274 139 28 56 chr5 167674514 167674586 -35410946 + MER96B DNA MER1_type? 229 298 -119 444 307 57 9 chr5 167674889 167675101 -35410431 + L3 LINE CR1 795 1016 -561 1761 175 73 20 chr5 167675212 167675567 -35409965 + MLT1C LTR MaLR 5 378 -89 181 261 43 0 chr5 167675657 167675703 -35409829 + L2 LINE L2 3204 3251 -21 2227 113 0 0 chr5 167675707 167676009 -35409523 - AluSx SINE Alu -10 302 1 209 348 34 0 chr5 167676158 167676247 -35409285 - MIR3 SINE MIR -8 200 109 464 296 132 16 chr5 167676492 167676681 -35408851 - MIR SINE MIR -50 212 2 373 328 49 8 chr5 167676735 167676857 -35408675 + MIR3 SINE MIR 33 159 -49 989 267 29 19 chr5 167676908 167677223 -35408309 - L2 LINE L2 0 3313 2996 186 342 163 56 chr5 167677720 167677916 -35407616 + L2 LINE L2 2546 2762 -552 480 218 37 0 chr5 167677917 167678028 -35407504 + L1ME1 LINE L1 6064 6184 0 717 284 56 10 chr5 167678112 167678309 -35407223 + MIR SINE MIR 46 251 -11 2356 171 27 66 chr5 167678362 167678846 -35406686 - MLT1C LTR MaLR -2 465 1 235 300 113 107 chr5 167678870 167679207 -35406325 + L2 LINE L2 2934 3272 0 448 323 62 0 chr5 167679311 167679506 -35406026 - LTR33A LTR ERVL -2 521 315 322 258 86 0 chr5 167679979 167680072 -35405460 - LTR50 LTR ERVL -694 101 1 331 343 44 10 chr5 167680111 167680253 -35405279 + MIR3 SINE MIR 35 180 -28 465 242 124 50 chr5 167680743 167680904 -35404628 + MIR SINE MIR 40 212 -50 244 187 93 13 chr5 167680971 167681046 -35404486 + L1ME3A LINE L1 6090 6170 0 275 235 47 12 chr5 167681245 167681330 -35404202 - L1ME4a LINE L1 -12 6109 6022 595 278 79 88 chr5 167681536 167681853 -35403679 - Charlie8 DNA MER1_type -2135 282 1 226 225 42 14 chr5 167682399 167682470 -35403062 + L3 LINE CR1 1188 1260 -317 203 268 158 0 chr5 167683046 167683128 -35402404 - MIR SINE MIR -10 252 158 228 226 0 38 chr5 167683128 167683181 -35402351 - MLT1G1 LTR MaLR 0 595 545 * 665 242 33 166 chr5 167683169 167683471 -35402061 - MLT1G LTR MaLR -258 337 45 443 269 64 51 chr5 167683505 167683665 -35401867 - MIR SINE MIR -36 172 11 368 312 32 7 chr5 167683716 167683870 -35401662 + MIR3 SINE MIR 44 201 -7 331 272 22 11 chr5 167684316 167684408 -35401124 + L2 LINE L2 3164 3256 -16 280 366 49 0 chr5 167684695 167684818 -35400714 + MIR SINE MIR 25 153 -55 1144 135 87 0 chr5 167686026 167686211 -35399321 + AluJb SINE Alu 85 285 -27 1752 340 80 415 chr5 167686223 167686302 -35399230 - L1MC1 LINE L1 -8 6325 6221 201 39 0 0 chr5 167686302 167686328 -35399204 + (CA)n Simple_repeat Simple_repeat 1 26 0 1752 340 80 415 chr5 167686328 167686707 -35398825 - L1MC1 LINE L1 -112 6221 5717 16296 147 38 45 chr5 167686707 167688572 -35396960 - Tigger3(Golem) DNA MER2_type -1 3028 1151 2583 27 3 0 chr5 167688572 167688869 -35396663 - AluY SINE Alu -13 298 1 16296 147 38 45 chr5 167688869 167689956 -35395576 - Tigger3(Golem) DNA MER2_type -1878 1151 96 2502 62 0 13 chr5 167689956 167690261 -35395271 - AluY SINE Alu -10 301 1 16296 147 38 45 chr5 167690261 167690355 -35395177 - Tigger3(Golem) DNA MER2_type -2933 96 3 1752 340 80 415 chr5 167690355 167690627 -35394905 - L1MC1 LINE L1 -616 5717 5665 641 247 17 61 chr5 167690617 167690848 -35394684 - L1MC/D LINE L1 -2002 5806 5586 * 242 348 57 37 chr5 167691484 167691728 -35393804 + L2 LINE L2 2811 3059 -213 437 341 82 25 chr5 167691967 167692331 -35393201 - L1MC4a LINE L1 -1876 5932 5548 203 344 11 33 chr5 167692666 167692756 -35392776 + L2 LINE L2 3141 3228 -44 285 51 0 0 chr5 167692773 167692812 -35392720 + (TG)n Simple_repeat Simple_repeat 2 40 0 450 309 74 43 chr5 167693142 167693372 -35392160 + MIR SINE MIR 12 248 -14 348 275 153 8 chr5 167693440 167693571 -35391961 - MIR3 SINE MIR -35 173 24 734 255 33 28 chr5 167693976 167694188 -35391344 - MIR SINE MIR -7 255 43 398 264 147 6 chr5 167694190 167694353 -35391179 + LTR16A1 LTR ERVL 264 449 -8 213 121 0 0 chr5 167694517 167694550 -35390982 + (ATG)n Simple_repeat Simple_repeat 2 34 0 283 259 28 65 chr5 167695013 167695121 -35390411 - MIR SINE MIR -139 123 20 1385 203 86 75 chr5 167695184 167695648 -35389884 - MER113 DNA MER1_type? -43 478 10 474 325 78 6 chr5 167695789 167695955 -35389577 - MIR3 SINE MIR -21 187 10 941 102 0 37 chr5 167695971 167696158 -35389374 + (TA)n Simple_repeat Simple_repeat 1 180 0 332 208 10 42 chr5 167696171 167696267 -35389265 + L1MC4 LINE L1 6614 6706 -1336 248 188 0 0 chr5 167696270 167696318 -35389214 - LTR66 LTR ERVL -171 439 392 485 201 138 44 chr5 167696389 167696548 -35388984 + MER105 DNA DNA 31 204 0 194 343 0 0 chr5 167696605 167696675 -35388857 - L3b LINE CR1 -218 1365 1296 408 354 19 0 chr5 167696695 167696853 -35388679 - L3 LINE CR1 -1188 389 229 368 317 147 19 chr5 167696829 167697088 -35388444 + L3 LINE CR1 1083 1374 -203 * 198 139 0 47 chr5 167697471 167697514 -35388018 - MIR SINE MIR -39 223 183 234 348 9 17 chr5 167698051 167698166 -35387366 + MIR3 SINE MIR 89 202 -6 7429 56 2 0 chr5 167698326 167699006 -35386526 - L1PA7 LINE L1 0 6154 5488 2079 124 7 0 chr5 167699006 167699296 -35386236 - AluSx SINE Alu -20 292 1 7429 56 2 0 chr5 167699296 167699862 -35385670 - L1PA7 LINE L1 -666 5488 4925 520 286 97 13 chr5 167700737 167700964 -35384568 + MIR SINE MIR 16 261 -1 1499 108 0 5 chr5 167701180 167701394 -35384138 - AluSg/x SINE Alu 0 301 89 333 214 14 0 chr5 167701451 167701521 -35384011 - MER116 DNA Mariner -6 74 4 214 171 0 24 chr5 167702493 167702534 -35382998 + G-rich Low_complexity Low_complexity 5 44 0 907 204 90 0 chr5 167705301 167705502 -35380030 - MER20 DNA MER1_type 0 219 1 268 255 159 0 chr5 167706331 167706476 -35379056 - MIR3 SINE MIR -11 197 30 181 216 0 0 chr5 167707296 167707333 -35378199 - L2 LINE L2 -6 3307 3271 580 256 26 6 chr5 167707460 167707616 -35377916 - MIR SINE MIR -79 183 25 417 286 163 63 chr5 167708529 167708892 -35376640 + L3 LINE CR1 1171 1569 -8 400 298 19 6 chr5 167709331 167709489 -35376043 + MIR3 SINE MIR 38 197 -11 386 219 82 64 chr5 167709550 167709783 -35375749 - L1ME4a LINE L1 -1 6120 5884 415 254 9 18 chr5 167709897 167710011 -35375521 - MER5A DNA MER1_type -70 119 7 391 312 113 6 chr5 167710331 167710567 -35374965 - MIR SINE MIR 0 262 8 320 313 15 15 chr5 167711834 167711965 -35373567 - MER5A DNA MER1_type -50 139 9 204 313 0 0 chr5 167712501 167712565 -35372967 + (CA)n Simple_repeat Simple_repeat 2 65 0 2016 146 33 36 chr5 167712899 167713262 -35372270 + THE1B LTR MaLR 1 362 -2 323 360 40 49 chr5 167713268 167713800 -35371732 - L2 LINE L2 -20 3252 2728 2323 107 3 3 chr5 167713909 167714217 -35371315 - AluSq SINE Alu -5 308 1 1555 131 10 93 chr5 167715175 167715487 -35370045 - AluJo SINE Alu -3 309 24 303 320 96 39 chr5 167715774 167715930 -35369602 - MIR SINE MIR -50 212 48 353 244 61 46 chr5 167716750 167716881 -35368651 - L2 LINE L2 0 3313 3181 1028 144 11 11 chr5 167717208 167717396 -35368136 + MER53 DNA DNA 2 189 0 394 246 23 31 chr5 167717612 167717742 -35367790 - MER103 DNA DNA -16 150 22 622 282 131 8 chr5 167717861 167718106 -35367426 + L3 LINE CR1 1235 1509 -68 386 298 19 74 chr5 167718513 167718728 -35366804 + MIR SINE MIR 54 256 -6 235 231 248 26 chr5 167718942 167719059 -35366473 + MIR3 SINE MIR 12 154 -54 1085 74 22 0 chr5 167719059 167719194 -35366338 + AluY SINE Alu 159 296 -15 210 383 0 0 chr5 167719322 167719403 -35366129 + (TG)n Simple_repeat Simple_repeat 1 81 0 215 211 19 19 chr5 167720041 167720093 -35365439 + MIR SINE MIR 99 150 -58 264 157 10 49 chr5 167720617 167720689 -35364843 - MIR3 SINE MIR -28 180 112 460 281 152 49 chr5 167720903 167721312 -35364220 + L2 LINE L2 2862 3312 -1 496 251 107 28 chr5 167721318 167721645 -35363887 - L1ME4a LINE L1 -22 6099 5747 343 301 55 14 chr5 167722051 167722197 -35363335 - MIR3 SINE MIR -3 205 54 404 253 52 23 chr5 167722402 167722576 -35362956 - Charlie7 DNA MER1_type -3 2609 2431 232 323 52 0 chr5 167722565 167722661 -35362871 - Charlie7 DNA MER1_type -2511 101 1 * 433 279 34 17 chr5 167722667 167722846 -35362686 - MER112 DNA MER1_type -4 256 75 3886 107 37 58 chr5 167722865 167723567 -35361965 - Tigger3(Golem) DNA MER2_type -63 2966 2280 703 185 0 0 chr5 167723560 167723668 -35361864 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 266 225 110 81 chr5 167723812 167723908 -35361624 - MIR SINE MIR -73 189 84 2008 70 0 4 chr5 167723908 167724149 -35361383 + AluY SINE Alu 57 296 -15 266 225 110 81 chr5 167724149 167724225 -35361307 - MIR SINE MIR -178 84 12 275 0 29 0 chr5 167724318 167724353 -35361179 + (TTCC)n Simple_repeat Simple_repeat 3 38 0 410 294 82 7 chr5 167724477 167724623 -35360909 - MIR3 SINE MIR -24 184 28 335 291 7 64 chr5 167724947 167725088 -35360444 + L2 LINE L2 3181 3313 0 2070 161 12 61 chr5 167725103 167725512 -35360020 - MLT1B LTR MaLR -1 389 1 188 300 62 0 chr5 167725731 167725811 -35359721 - MIR SINE MIR -1 261 177 314 236 14 0 chr5 167726016 167726088 -35359444 - LTR33A LTR ERVL -4 519 447 407 275 38 0 chr5 167726088 167726219 -35359313 - MIR SINE MIR -109 153 18 645 223 32 6 chr5 167726564 167726721 -35358811 - MIR3 SINE MIR -41 167 7 220 186 23 0 chr5 167727094 167727137 -35358395 - L2 LINE L2 -14 3258 3215 1338 255 128 4 chr5 167727300 167727762 -35357770 - LTR33A LTR ERVL -4 519 1 227 309 91 9 chr5 167727779 167727889 -35357643 + MIR SINE MIR 85 203 -59 2322 113 0 3 chr5 167728780 167729091 -35356441 - AluSx SINE Alu -2 310 1 671 330 96 48 chr5 167729617 167730249 -35355283 - L2 LINE L2 -20 3252 2601 222 62 0 0 chr5 167730250 167730282 -35355250 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 183 170 0 0 chr5 167730300 167730347 -35355185 + (TA)n Simple_repeat Simple_repeat 2 48 0 266 319 51 19 chr5 167730461 167730618 -35354914 - L2 LINE L2 -743 2571 2410 613 173 10 0 chr5 167730808 167730912 -35354620 + MER20 DNA MER1_type 113 217 -2 513 238 92 37 chr5 167731376 167731540 -35353992 - MER5B DNA MER1_type -3 175 3 512 249 260 15 chr5 167731551 167731697 -35353835 - MER102b DNA MER1_type -1093 335 226 329 0 24 0 chr5 167731697 167731738 -35353794 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 512 249 260 15 chr5 167731738 167731860 -35353672 - MER102b DNA MER1_type -1202 226 1 410 255 102 19 chr5 167732121 167732278 -35353254 + MER20 DNA MER1_type 27 196 -23 2547 75 0 0 chr5 167732991 167733296 -35352236 - AluY SINE Alu -6 305 1 248 282 70 14 chr5 167733406 167733477 -35352055 - MER5A DNA MER1_type -1 188 114 756 234 101 27 chr5 167733682 167733870 -35351662 + MER63A DNA MER1_type 1 202 -8 346 338 45 12 chr5 167734037 167734245 -35351287 + MIR SINE MIR 41 255 -7 220 276 82 41 chr5 167734973 167735071 -35350461 + MIR SINE MIR 59 160 -102 258 136 0 0 chr5 167735611 167735655 -35349877 + (T)n Simple_repeat Simple_repeat 1 44 0 192 271 51 17 chr5 167736204 167736263 -35349269 - MIR SINE MIR -155 107 47 202 282 26 39 chr5 167736402 167736480 -35349052 - MIR3 SINE MIR -31 177 101 825 236 11 6 chr5 167736929 167737103 -35348429 - MER20 DNA MER1_type -20 199 25 1939 168 21 37 chr5 167737108 167737488 -35348044 - THE1C LTR MaLR 0 375 2 1699 221 77 73 chr5 167737748 167738265 -35347267 - MLT2B1 LTR ERVL 0 520 2 396 81 145 0 chr5 167738267 167738329 -35347203 + AluSq SINE Alu 1 71 -232 1611 130 0 0 chr5 167738682 167738913 -35346619 + AluSq SINE Alu 73 303 -10 251 265 78 10 chr5 167739555 167739657 -35345875 - MIR3 SINE MIR -47 161 53 448 219 323 0 chr5 167739984 167740148 -35345384 + Charlie8 DNA MER1_type 1 217 -2200 230 313 39 16 chr5 167740955 167741083 -35344449 + MIR3 SINE MIR 30 160 -48 665 231 15 39 chr5 167741518 167741721 -35343811 + MIR SINE MIR 17 214 -48 267 103 0 0 chr5 167741753 167741792 -35343740 + (CAT)n Simple_repeat Simple_repeat 1 39 0 209 194 0 0 chr5 167742503 167742539 -35342993 + MIR SINE MIR 211 246 -16 195 244 0 0 chr5 167742577 167742622 -35342910 + L2 LINE L2 3261 3305 -8 216 344 101 32 chr5 167742682 167742871 -35342661 - L2 LINE L2 -219 3053 2852 498 248 7 21 chr5 167743483 167743624 -35341908 + MIR SINE MIR 49 187 -75 21 36 0 0 chr5 167743671 167743699 -35341833 + AT_rich Low_complexity Low_complexity 1 28 0 335 290 40 81 chr5 167743770 167744018 -35341514 - Charlie8 DNA MER1_type -2179 238 1 600 14 0 0 chr5 167744455 167744524 -35341008 + (TG)n Simple_repeat Simple_repeat 2 70 0 334 290 124 0 chr5 167746013 167746158 -35339374 + MIR SINE MIR 33 195 -67 195 246 0 77 chr5 167746284 167746349 -35339183 + MIR SINE MIR 183 242 -20 225 335 135 12 chr5 167746429 167746599 -35338933 + MIR3 SINE MIR 16 206 -2 329 248 35 35 chr5 167746710 167746823 -35338709 - Charlie8 DNA MER1_type -1890 527 415 470 281 25 35 chr5 167746859 167747062 -35338470 - Charlie8 DNA MER1_type -2155 262 62 198 330 55 11 chr5 167747368 167747459 -35338073 - MER5A DNA MER1_type -28 161 67 526 277 18 59 chr5 167748240 167748478 -35337054 + MIR SINE MIR 2 236 -26 481 291 20 59 chr5 167748669 167748872 -35336660 + MIR3 SINE MIR 11 205 -3 203 250 0 0 chr5 167749198 167749242 -35336290 + L2 LINE L2 2996 3039 -274 361 283 38 0 chr5 167749388 167749494 -35336038 + L2 LINE L2 3194 3303 -10 258 32 0 0 chr5 167749505 167749536 -35335996 + (A)n Simple_repeat Simple_repeat 1 31 0 216 293 13 40 chr5 167750853 167750928 -35334604 + MIR SINE MIR 120 192 -70 801 206 88 15 chr5 167751061 167751265 -35334267 + MIR SINE MIR 6 224 -38 795 222 24 12 chr5 167751395 167751666 -35333866 + Charlie1a DNA MER1_type 8 324 -1131 * 4574 186 43 8 chr5 167751662 167752608 -35332924 + Charlie1a DNA MER1_type 477 1455 0 333 322 55 55 chr5 167752670 167752853 -35332679 + L3 LINE CR1 1018 1200 -377 2089 123 0 3 chr5 167752866 167753159 -35332373 + AluSx SINE Alu 1 292 -20 2139 107 0 0 chr5 167753165 167753481 -35332051 + AluY SINE Alu 1 316 0 3130 78 0 8 chr5 167753481 167753877 -35331655 + L1PA8 LINE L1 5780 6172 0 200 222 37 0 chr5 167753919 167753973 -35331559 + L3 LINE CR1 1218 1273 -304 291 253 22 33 chr5 167754103 167754194 -35331338 + CT-rich Low_complexity Low_complexity 1 90 0 350 265 10 10 chr5 167754281 167754379 -35331153 + GA-rich Low_complexity Low_complexity 2 99 0 21 0 0 0 chr5 167754630 167754651 -35330881 + AT_rich Low_complexity Low_complexity 1 21 0 460 290 35 35 chr5 167754664 167754947 -35330585 + L1ME4a LINE L1 5629 5911 -210 187 329 123 27 chr5 167754947 167755093 -35330439 - L2 LINE L2 -4 3309 3150 307 278 98 0 chr5 167755138 167755271 -35330261 + L1ME4a LINE L1 5967 6112 -9 617 270 102 10 chr5 167755561 167755757 -35329775 - MIR SINE MIR -28 234 21 226 291 25 13 chr5 167755811 167755890 -35329642 - L2 LINE L2 -188 3084 3005 1401 310 106 47 chr5 167755969 167757045 -35328487 - L2 LINE L2 -453 2861 1723 25 31 0 0 chr5 167757282 167757314 -35328218 + AT_rich Low_complexity Low_complexity 1 32 0 718 219 78 31 chr5 167757318 167757510 -35328022 - MIR SINE MIR -6 256 56 727 274 139 7 chr5 167758281 167758798 -35326734 - MLT2E LTR ERVL 0 628 6 236 284 144 54 chr5 167759086 167759371 -35326161 + L2 LINE L2 2898 3311 -2 180 111 0 0 chr5 167759373 167759400 -35326132 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 2234 117 0 0 chr5 167759570 167759870 -35325662 - AluSg SINE Alu -10 300 1 541 327 30 56 chr5 167759989 167760255 -35325277 - MIR SINE MIR 0 262 4 654 298 27 35 chr5 167760279 167760537 -35324995 - MIR SINE MIR -3 259 4 274 309 65 78 chr5 167761327 167761380 -35324152 - L2 LINE L2 -181 3091 3039 2493 129 8 21 chr5 167761380 167761760 -35323772 - THE1C LTR MaLR 0 375 1 274 309 65 78 chr5 167761760 167761923 -35323609 - L2 LINE L2 -233 3039 2878 1052 249 127 32 chr5 167762024 167762485 -35323047 + MLT1G1 LTR MaLR 3 586 -9 357 293 21 14 chr5 167762552 167762692 -35322840 + MIR SINE MIR 122 262 0 268 347 52 10 chr5 167762722 167762915 -35322617 - L2 LINE L2 -684 2630 2430 601 293 119 95 chr5 167762931 167763501 -35322031 + MLT1K LTR MaLR 5 588 0 720 248 67 26 chr5 167763675 167764329 -35321203 + L1ME3A LINE L1 5394 6170 0 183 286 118 83 chr5 167764867 167765206 -35320326 + L2 LINE L2 2539 2889 -425 243 0 0 0 chr5 167765800 167765827 -35319705 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7317 62 18 3 chr5 167765829 167767319 -35318213 - L1PA7 LINE L1 -2 6152 4656 548 188 81 25 chr5 167767423 167767583 -35317949 + Charlie7 DNA MER1_type 2444 2612 0 323 253 13 0 chr5 167767781 167767860 -35317672 - MIR SINE MIR -10 252 173 664 92 20 0 chr5 167767873 167767971 -35317561 + L1PB1 LINE L1 3 102 -6761 14510 183 38 23 chr5 167767977 167771869 -35313663 + L1PB1 LINE L1 995 5143 -1724 225 0 0 0 chr5 167771869 167771894 -35313638 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 14510 183 38 23 chr5 167771894 167773646 -35311886 + L1PB1 LINE L1 5143 6867 0 450 231 132 0 chr5 167773655 167773776 -35311756 - MIR SINE MIR -77 185 49 200 143 29 0 chr5 167775012 167775047 -35310485 + (TAA)n Simple_repeat Simple_repeat 3 38 0 301 264 136 14 chr5 167775063 167775203 -35310329 - MIR SINE MIR -52 210 54 25 0 0 0 chr5 167775254 167775279 -35310253 + AT_rich Low_complexity Low_complexity 1 25 0 523 284 44 22 chr5 167775515 167775740 -35309792 + L1ME3 LINE L1 5761 5990 -172 2272 297 118 20 chr5 167775871 167777253 -35308279 - L2 LINE L2 -14 3299 1783 1529 193 8 4 chr5 167777253 167777517 -35308015 + MER66B LTR ERV1 1 265 -221 253 196 0 0 chr5 167777582 167777628 -35307904 - MER66A LTR ERV1 -222 256 211 1300 177 5 0 chr5 167777634 167777843 -35307689 + MER66B LTR ERV1 277 486 0 395 258 59 109 chr5 167777843 167778099 -35307433 - L2 LINE L2 -1528 1786 1544 274 280 254 5 chr5 167779084 167779277 -35306255 + L1M4b LINE L1 1106 1351 -5195 253 350 34 8 chr5 167779614 167779731 -35305801 - L3 LINE CR1 -56 1521 1402 367 352 70 75 chr5 167779816 167780259 -35305273 + L2 LINE L2 2810 3250 -22 199 271 0 17 chr5 167780253 167780312 -35305220 + MIR SINE MIR 175 232 -30 * 194 302 0 0 chr5 167780285 167780338 -35305194 + L2 LINE L2 3210 3262 -10 * 250 336 56 28 chr5 167780343 167780486 -35305046 + MIR3 SINE MIR 39 185 -23 306 264 50 66 chr5 167781010 167781131 -35304401 + MIR SINE MIR 33 151 -57 271 326 112 32 chr5 167781447 167781634 -35303898 + MIR3 SINE MIR 3 204 -4 342 252 75 34 chr5 167782383 167782481 -35303051 - MER103 DNA DNA -11 155 48 207 0 0 0 chr5 167782481 167782504 -35303028 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 342 252 75 34 chr5 167782504 167782552 -35302980 - MER103 DNA DNA -118 48 3 330 344 47 35 chr5 167782795 167783138 -35302394 - L2 LINE L2 0 3313 2967 465 318 67 60 chr5 167783285 167783687 -35301845 - L2 LINE L2 -68 3245 2841 1608 244 77 19 chr5 167784022 167784505 -35301027 + MLT1J LTR MaLR 1 511 0 1715 148 54 0 chr5 167784827 167785104 -35300428 + AluJo SINE Alu 1 292 -20 2702 189 57 12 chr5 167785158 167785719 -35299813 + L1ME1 LINE L1 5576 6161 -5 180 0 0 0 chr5 167786108 167786128 -35299404 + (A)n Simple_repeat Simple_repeat 1 20 0 247 282 87 0 chr5 167786152 167786255 -35299277 - MER5C DNA MER1_type -212 112 1 236 290 43 14 chr5 167788241 167788310 -35297222 + MER81 DNA DNA 36 106 -8 367 203 220 0 chr5 167788310 167788428 -35297104 - MIR3 SINE MIR -31 177 34 243 184 105 40 chr5 167788678 167788754 -35296778 - L1M3d LINE L1 -5128 763 683 185 356 107 34 chr5 167789805 167789954 -35295578 + MIR SINE MIR 10 169 -93 846 268 68 8 chr5 167789985 167790220 -35295312 + MIR SINE MIR 1 249 -13 237 222 0 0 chr5 167790188 167790233 -35295299 + L2 LINE L2 3263 3307 -6 * 423 0 0 0 chr5 167790539 167790586 -35294946 + (CA)n Simple_repeat Simple_repeat 2 48 0 547 254 0 9 chr5 167790660 167790774 -35294758 - MIR SINE MIR -75 133 21 323 321 9 0 chr5 167791305 167791414 -35294118 - MIR3 SINE MIR -15 193 84 187 267 218 30 chr5 167791785 167791886 -35293646 + L3b LINE CR1 1334 1453 -130 801 264 60 44 chr5 167792709 167792959 -35292573 - MIR SINE MIR -6 256 3 245 341 121 15 chr5 167793141 167793273 -35292259 - L2 LINE L2 -1 3271 3126 436 295 26 63 chr5 167793346 167793536 -35291996 + MIR SINE MIR 1 183 -79 421 229 58 114 chr5 167793801 167794154 -35291378 + L1MC4a LINE L1 5665 6027 -94 12246 41 1 1 chr5 167794188 167796366 -35289166 - L1PA5 LINE L1 0 6154 3976 33 25 0 0 chr5 167796395 167796435 -35289097 + AT_rich Low_complexity Low_complexity 1 40 0 201 213 33 16 chr5 167797410 167797471 -35288061 + GA-rich Low_complexity Low_complexity 4 65 0 1987 135 0 14 chr5 167798025 167798322 -35287210 - AluSx SINE Alu -18 294 2 184 358 104 0 chr5 167798441 167798508 -35287024 + L2 LINE L2 3186 3259 -13 604 272 12 0 chr5 167799138 167799300 -35286232 - MER103 DNA DNA -1 165 2 959 164 26 11 chr5 167799415 167799604 -35285928 - MSTD-int LTR MaLR -1542 193 2 1022 189 42 76 chr5 167799606 167799939 -35285593 - MSTD LTR MaLR 0 396 1 1306 192 8 4 chr5 167799939 167800200 -35285332 - L1 LINE L1 -810 5336 5075 213 333 33 22 chr5 167800343 167800433 -35285099 + MIR3 SINE MIR 112 202 -6 24 53 0 0 chr5 167800484 167800522 -35285010 + AT_rich Low_complexity Low_complexity 1 38 0 911 259 22 9 chr5 167800524 167800748 -35284784 - MIR SINE MIR -7 255 29 535 329 123 13 chr5 167801121 167801519 -35284013 - L3 LINE CR1 -2 1575 1134 225 355 13 0 chr5 167801829 167801905 -35283627 + L2 LINE L2 3194 3270 -2 700 249 31 16 chr5 167801973 167802166 -35283366 - MIR SINE MIR -49 213 18 298 308 116 54 chr5 167802642 167803166 -35282366 + L2 LINE L2 2649 3220 -52 383 298 28 21 chr5 167803199 167803340 -35282192 + MIR3 SINE MIR 53 194 -14 285 233 22 11 chr5 167804238 167804328 -35281204 + MIR SINE MIR 2 92 -170 500 250 79 7 chr5 167805116 167805268 -35280264 + MIR SINE MIR 100 262 0 231 197 118 79 chr5 167805633 167805712 -35279820 - L2 LINE L2 0 3313 3226 2107 73 0 0 chr5 167805712 167805971 -35279561 + AluY SINE Alu 32 290 -21 231 197 118 79 chr5 167805971 167806018 -35279514 - L2 LINE L2 -87 3226 3182 205 239 220 28 chr5 167806487 167806596 -35278936 + MIR SINE MIR 20 149 -59 254 321 14 60 chr5 167807134 167807205 -35278327 + MIR SINE MIR 53 126 -136 1492 110 7 48 chr5 167807205 167807477 -35278055 - L1MA4A LINE L1 0 6303 6043 254 321 14 60 chr5 167807477 167807623 -35277909 + MIR SINE MIR 126 260 -2 494 236 8 21 chr5 167807630 167808003 -35277529 + CT-rich Low_complexity Low_complexity 1 368 0 200 348 0 11 chr5 167808016 167808108 -35277424 + CT-rich Low_complexity Low_complexity 1 91 0 224 324 40 47 chr5 167808238 167808386 -35277146 + L3 LINE CR1 68 214 -1363 205 343 37 9 chr5 167808639 167808747 -35276785 + MIR SINE MIR 25 135 -127 * 529 276 51 62 chr5 167808742 167809017 -35276515 - L2 LINE L2 0 3313 3042 773 204 18 77 chr5 167809039 167809260 -35276272 - MER20 DNA MER1_type -11 208 1 468 306 120 14 chr5 167809264 167809480 -35276052 + MIR SINE MIR 21 259 -3 2229 169 38 24 chr5 167809558 167809984 -35275548 + MSTB1 LTR MaLR 1 432 0 442 346 65 34 chr5 167810997 167811260 -35274272 - L2 LINE L2 -13 3259 2989 320 281 182 16 chr5 167811431 167811673 -35273859 + LTR16A LTR ERVL 90 371 -79 207 281 7 14 chr5 167812974 167813094 -35272438 + MIR SINE MIR 72 189 -73 485 278 80 42 chr5 167813151 167813363 -35272169 - MIR SINE MIR -38 224 5 915 212 72 43 chr5 167813470 167813930 -35271602 + MLT1E2 LTR MaLR 1 505 0 429 54 0 0 chr5 167814370 167814426 -35271106 + (TC)n Simple_repeat Simple_repeat 1 56 0 182 36 0 36 chr5 167814621 167814649 -35270883 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 782 152 60 7 chr5 167815375 167815526 -35270006 + MER5A DNA MER1_type 7 165 -24 484 157 38 33 chr5 167815570 167815679 -35269853 + MLT1I LTR MaLR 317 409 0 * 1004 291 67 6 chr5 167815679 167816021 -35269511 + MER113 DNA MER1_type? 154 516 -5 407 243 9 18 chr5 167816032 167816143 -35269389 - MIR SINE MIR -56 152 43 275 154 19 0 chr5 167816439 167816491 -35269041 - MLT1D LTR MaLR 0 505 453 597 218 67 21 chr5 167816547 167816812 -35268720 - MLT1D LTR MaLR -142 325 35 438 200 52 52 chr5 167816866 167817001 -35268531 + MIR3 SINE MIR 55 189 -19 517 315 38 21 chr5 167817579 167817817 -35267715 + L1MC/D LINE L1 5455 5696 -2112 632 236 127 6 chr5 167817821 167817986 -35267546 + LTR33A LTR ERVL 1 185 -338 890 227 36 9 chr5 167818025 167818250 -35267282 + LTR33A LTR ERVL 291 521 -2 43618 33 22 1 chr5 167818316 167824330 -35261202 + L1PA2 LINE L1 13 6152 -3 265 239 54 33 chr5 167824401 167824493 -35261039 + MER113 DNA MER1_type? 278 371 -150 200 299 30 0 chr5 167824584 167824651 -35260881 - MIR3 SINE MIR -53 155 87 286 345 18 9 chr5 167825320 167825430 -35260102 + MIR SINE MIR 149 259 -3 216 374 148 0 chr5 167825425 167825607 -35259925 + L2 LINE L2 2842 3050 -222 * 559 299 40 0 chr5 167825723 167825924 -35259608 - MIR SINE MIR -3 259 51 198 265 29 0 chr5 167826553 167826621 -35258911 - MIR SINE MIR -32 230 161 370 245 63 4 chr5 167826673 167826822 -35258710 - MIR SINE MIR -67 141 5 1782 222 24 4 chr5 167826986 167827360 -35258172 + MLT2D LTR ERVL 1 479 -41 817 182 28 0 chr5 167827660 167827803 -35257729 - FRAM SINE Alu -21 155 9 265 297 122 11 chr5 167827924 167828092 -35257440 + MIR SINE MIR 1 188 -74 282 313 10 0 chr5 167828783 167828879 -35256653 + MIR3 SINE MIR 64 160 -48 199 182 23 0 chr5 167829134 167829178 -35256354 + MIR3 SINE MIR 150 194 -14 185 299 82 21 chr5 167829354 167829451 -35256081 + MIR SINE MIR 48 150 -112 493 271 181 5 chr5 167829653 167829863 -35255669 - MIR SINE MIR -6 256 10 8194 88 5 1 chr5 167831366 167832433 -35253099 - MER11C LTR ERVK 0 1071 1 522 241 29 29 chr5 167832743 167832913 -35252619 + MER5A DNA MER1_type 18 187 -2 294 336 80 0 chr5 167833406 167833519 -35252013 + L2 LINE L2 3134 3255 -17 237 276 51 10 chr5 167834058 167834156 -35251376 - L2 LINE L2 -27 3286 3185 184 340 58 34 chr5 167834267 167834473 -35251059 - L2 LINE L2 -223 3049 2839 * 224 246 9 91 chr5 167834460 167834570 -35250962 - MIR SINE MIR -97 165 65 471 307 152 10 chr5 167834999 167835387 -35250145 + L2 LINE L2 2830 3272 0 262 313 70 8 chr5 167886202 167886330 -35199202 - L2 LINE L2 -205 3067 2932 428 302 18 18 chr5 167886331 167886500 -35199032 + (TG)n Simple_repeat Simple_repeat 2 170 0 385 337 6 24 chr5 167886546 167886712 -35198820 + (TG)n Simple_repeat Simple_repeat 2 164 0 372 324 17 12 chr5 167886865 167887038 -35198494 - MIR SINE MIR -1 261 88 230 224 20 0 chr5 167887201 167887250 -35198282 + MIR SINE MIR 53 102 -106 322 364 7 0 chr5 167887330 167887484 -35198048 + MIR SINE MIR 94 248 -14 467 251 58 73 chr5 167887526 167887717 -35197815 + MIR SINE MIR 17 204 -58 361 272 96 0 chr5 167888830 167888966 -35196566 - MIR SINE MIR -109 153 5 816 286 26 4 chr5 167889324 167889558 -35195974 + MIR SINE MIR 3 241 -21 574 221 100 135 chr5 167889616 167890046 -35195486 - MLT1L LTR MaLR 0 615 201 1430 118 0 5 chr5 167890332 167890527 -35195005 + AluSg/x SINE Alu 106 299 -11 2476 67 0 0 chr5 167890763 167891060 -35194472 + AluY SINE Alu 1 297 -14 662 215 67 0 chr5 167891153 167891302 -35194230 - MER58A DNA MER1_type -2 222 64 1449 102 0 126 chr5 167891302 167891587 -35193945 - AluSc SINE Alu 0 309 61 203 259 138 43 chr5 167891733 167891849 -35193683 + L2 LINE L2 3181 3307 -6 202 276 0 0 chr5 167893433 167893491 -35192041 + MIR SINE MIR 67 124 -84 988 264 92 48 chr5 167893533 167893739 -35191793 - MER113 DNA MER1_type? -67 454 258 2228 104 0 0 chr5 167893739 167894028 -35191504 - AluSq SINE Alu -24 289 1 988 264 92 48 chr5 167894028 167894256 -35191276 - MER113 DNA MER1_type? -263 258 1 362 310 9 0 chr5 167894360 167894476 -35191056 + L2 LINE L2 3156 3272 0 336 268 41 0 chr5 167894627 167894724 -35190808 + MIR SINE MIR 41 141 -67 328 274 0 0 chr5 167894724 167894808 -35190724 - MER4-int LTR ERV1 -5438 1160 1077 194 392 0 0 chr5 167895702 167895799 -35189733 + MIR SINE MIR 166 262 0 227 186 0 23 chr5 167898529 167898572 -35186960 + CT-rich Low_complexity Low_complexity 1 42 0 373 297 51 23 chr5 167899689 167899864 -35185668 + MER102a DNA MER1_type 1 180 -150 358 274 62 0 chr5 167899869 167899982 -35185550 + MER102a DNA MER1_type 211 330 0 442 164 0 0 chr5 167900022 167900089 -35185443 + MER58A DNA MER1_type 4 70 -37 317 205 15 17 chr5 167900089 167900163 -35185369 + AluS SINE Alu 1 64 -239 1828 65 4 0 chr5 167900689 167900921 -35184611 - L1PA13 LINE L1 -66 6097 5865 539 239 191 20 chr5 167900926 167901277 -35184255 - L1MEc LINE L1 -4129 2267 1857 2799 167 11 15 chr5 167901282 167901820 -35183712 - L1MB8 LINE L1 -6 6172 5637 500 312 8 0 chr5 167901832 167901957 -35183575 - MLT1K LTR MaLR -425 163 38 244 291 55 18 chr5 167901997 167902107 -35183425 - MIR SINE MIR -3 259 146 247 313 96 12 chr5 167902140 167902306 -35183226 - MER102a DNA MER1_type -3 327 148 352 284 182 0 chr5 167902412 167902560 -35182972 + MER5A DNA MER1_type 9 183 -6 262 283 80 44 chr5 167902651 167902764 -35182768 + MER5B DNA MER1_type 61 177 -1 2249 281 51 35 chr5 167902879 167903913 -35181619 + L1ME LINE L1 80 1152 -4928 2349 99 0 3 chr5 167903913 167904215 -35181317 - AluSq SINE Alu -10 303 3 2249 281 51 35 chr5 167904215 167904451 -35181081 + L1ME LINE L1 1152 1383 -4697 439 275 45 22 chr5 167904447 167904625 -35180907 + L1ME LINE L1 2098 2279 -3801 * 915 117 22 186 chr5 167904686 167904917 -35180615 + 7SK RNA RNA 1 193 0 299 277 40 0 chr5 167904964 167905065 -35180467 - MER5B DNA MER1_type -68 110 6 616 189 63 126 chr5 167905490 167905728 -35179804 + MIR SINE MIR 8 230 -32 195 146 0 0 chr5 167906708 167906749 -35178783 + (TG)n Simple_repeat Simple_repeat 2 42 0 238 150 25 0 chr5 167907102 167907142 -35178390 - L1MB1 LINE L1 -6 6162 6122 3488 97 54 153 chr5 167907295 167907676 -35177856 - Tigger3(Golem) DNA MER2_type -1 3028 2611 875 92 0 0 chr5 167907676 167907785 -35177747 + AluSq SINE Alu 129 237 -76 3488 97 54 153 chr5 167907785 167907987 -35177545 - Tigger3(Golem) DNA MER2_type -418 2611 2430 2036 159 128 13 chr5 167907987 167908370 -35177162 + MSTA LTR MaLR 2 428 0 3488 97 54 153 chr5 167908370 167908510 -35177022 - Tigger3(Golem) DNA MER2_type -599 2430 2278 773 138 0 9 chr5 167908501 167908610 -35176922 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 947 114 28 12 chr5 167909135 167909466 -35176066 + CT-rich Low_complexity Low_complexity 1 336 0 1458 162 12 8 chr5 167909497 167909744 -35175788 - AluJo SINE Alu -64 248 1 823 220 50 0 chr5 167909952 167910140 -35175392 + MIR SINE MIR 59 250 -12 24 0 0 0 chr5 167910165 167910189 -35175343 + AT_rich Low_complexity Low_complexity 1 24 0 180 340 142 21 chr5 167911886 167912027 -35173505 - MER5A DNA MER1_type -3 186 29 670 246 92 20 chr5 167912037 167912232 -35173300 - MER63A DNA MER1_type 0 210 2 262 306 31 20 chr5 167912311 167912409 -35173123 + MIR3 SINE MIR 71 169 -39 256 376 29 40 chr5 167912402 167912575 -35172957 - MER5B DNA MER1_type -6 172 2 * 2072 102 0 70 chr5 167912740 167912940 -35172592 - AluSq SINE Alu -17 296 124 6587 37 0 0 chr5 167912940 167913673 -35171859 - L1PA5 LINE L1 -5 6149 5417 2072 102 0 70 chr5 167913673 167913786 -35171746 - AluSq SINE Alu -189 124 5 22 0 0 0 chr5 167913855 167913877 -35171655 + AT_rich Low_complexity Low_complexity 1 22 0 223 259 0 17 chr5 167913902 167913960 -35171572 - L2 LINE L2 -1 3312 3256 744 268 24 5 chr5 167914017 167914230 -35171302 - MIR SINE MIR 0 262 46 337 356 67 13 chr5 167914643 167914868 -35170664 - L2 LINE L2 -250 3063 2827 890 263 41 7 chr5 167915009 167915279 -35170253 - L1ME2 LINE L1 -74 6090 5812 2323 144 12 6 chr5 167915529 167915870 -35169662 - MER2 DNA MER2_type -1 343 1 2410 161 108 30 chr5 167916259 167916731 -35168801 - LTR64 LTR ERVK -2 511 3 1462 199 109 29 chr5 167916792 167917104 -35168428 + MER21B LTR ERV1 1 337 -526 1291 196 148 102 chr5 167917204 167917617 -35167915 + MER21B LTR ERV1 329 846 -85 1319 156 4 41 chr5 167917618 167917870 -35167662 - L1 LINE L1 -768 6080 5837 1272 201 13 72 chr5 167917870 167918174 -35167358 - AluJo SINE Alu -26 286 1 1319 156 4 41 chr5 167918174 167918191 -35167341 - L1 LINE L1 -1011 5837 5821 * 7630 186 16 1 chr5 167918176 167919686 -35165846 - L1 LINE L1 -1734 5114 3582 1630 149 29 0 chr5 167919786 167920101 -35165431 - L1 LINE L1 -4759 2090 1767 6160 163 23 14 chr5 167920120 167920477 -35165055 - L1PB1 LINE L1 -2 6865 6513 213 39 0 0 chr5 167920477 167920503 -35165029 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 6160 163 23 14 chr5 167920503 167922088 -35163444 - L1PB1 LINE L1 -354 6513 4911 * 18147 110 61 12 chr5 167922085 167922713 -35162819 - L1PB1 LINE L1 -3856 3006 2410 2007 136 0 3 chr5 167922713 167923044 -35162488 - AluSx SINE Alu 0 330 1 18147 110 61 12 chr5 167923044 167925280 -35160252 - L1PB1 LINE L1 -4452 2410 1 7067 187 19 99 chr5 167925283 167927232 -35158300 - L1 LINE L1 -5053 1796 5 4579 176 17 42 chr5 167927233 167927778 -35157754 - L1MB8 LINE L1 -40 6138 5581 2381 120 14 22 chr5 167927778 167928136 -35157396 - THE1A LTR MaLR 0 355 1 12572 92 15 0 chr5 167928136 167929693 -35155839 - THE1A-int LTR MaLR 0 1580 1 2406 124 11 8 chr5 167929693 167930047 -35155485 - THE1A LTR MaLR 0 355 1 4579 176 17 42 chr5 167930047 167930524 -35155008 - L1MB8 LINE L1 -594 5584 5142 249 225 33 17 chr5 167931433 167931553 -35153979 + (TTATA)n Simple_repeat Simple_repeat 3 124 0 191 103 26 0 chr5 167931565 167931604 -35153928 + (TA)n Simple_repeat Simple_repeat 1 40 0 2526 157 12 26 chr5 167931978 167932215 -35153317 - MSTA LTR MaLR 0 428 198 2053 110 0 42 chr5 167932215 167932523 -35153009 - AluSx SINE Alu -17 295 1 2526 157 12 26 chr5 167932523 167932712 -35152820 - MSTA LTR MaLR -230 198 8 446 167 0 60 chr5 167933263 167933347 -35152185 + MSTA LTR MaLR 129 207 -221 1031 288 40 24 chr5 167933504 167933927 -35151605 + LTR16A LTR ERVL 21 450 0 1894 162 27 0 chr5 167934089 167934385 -35151147 + AluJb SINE Alu 1 304 -8 344 246 30 22 chr5 167934822 167934930 -35150602 + MER5A DNA MER1_type 4 112 -77 601 183 9 9 chr5 167934949 167935064 -35150468 - MLT1D LTR MaLR 0 505 391 4575 187 19 32 chr5 167936257 167936874 -35148658 - L1MA9 LINE L1 -38 7295 6672 1910 158 10 3 chr5 167936874 167937177 -35148355 - AluJo SINE Alu -6 306 2 4575 187 19 32 chr5 167937177 167938005 -35147527 - L1MA9 LINE L1 -661 6672 5869 * 5740 214 42 64 chr5 167937995 167939367 -35146165 - L1MA9 LINE L1 -2540 4627 3226 399 21 0 0 chr5 167939367 167939415 -35146117 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 5740 214 42 64 chr5 167939415 167939445 -35146087 - L1MA9 LINE L1 -3941 3226 3197 663 240 0 8 chr5 167939445 167939570 -35145962 - FLAM_A SINE Alu -9 124 1 5740 214 42 64 chr5 167939570 167940554 -35144978 - L1MA9 LINE L1 -3970 3197 2193 18503 38 2 0 chr5 167940554 167943443 -35142089 - L1PA4 LINE L1 0 6155 3263 5740 214 42 64 chr5 167943443 167944913 -35140619 - L1MA9 LINE L1 -4974 2193 822 258 352 21 7 chr5 167945343 167945485 -35140047 - L1ME LINE L1 -413 5757 5614 285 128 0 0 chr5 167945622 167945669 -35139863 + (CA)n Simple_repeat Simple_repeat 1 47 0 3002 66 8 0 chr5 167945727 167946120 -35139412 - L1P3 LINE L1 -4820 1641 1246 210 188 31 47 chr5 167946660 167946724 -35138808 + MIR SINE MIR 3 65 -197 323 257 26 53 chr5 167947182 167947295 -35138237 + L2 LINE L2 2191 2300 -1014 3805 206 27 9 chr5 167947455 167948192 -35137340 - MER21B LTR ERV1 -72 791 42 383 286 0 0 chr5 167948195 167948272 -35137260 - MER21B LTR ERV1 -775 88 12 727 205 8 0 chr5 167948281 167948408 -35137124 - FLAM_C SINE Alu -1 132 5 436 183 263 0 chr5 167948450 167948587 -35136945 + L2 LINE L2 2406 2578 -736 1335 217 101 53 chr5 167948587 167949001 -35136531 - MER57B LTR ERV1 0 434 1 2409 127 58 7 chr5 167949008 167949418 -35136114 + LTR23 LTR ERV1 1 431 -6 1192 204 58 14 chr5 167949418 167949693 -35135839 + L2 LINE L2 2572 2858 -456 1193 262 103 24 chr5 167949693 167950159 -35135373 + LTR33 LTR ERVL 1 503 -18 1225 264 60 25 chr5 167950160 167950595 -35134937 + L2 LINE L2 2859 3308 -5 2260 193 32 34 chr5 167950637 167950919 -35134613 - MLT1C LTR MaLR 0 467 185 2186 86 20 7 chr5 167950919 167951211 -35134321 - AluY SINE Alu -15 296 1 2260 193 32 34 chr5 167951211 167951394 -35134138 - MLT1C LTR MaLR -282 185 3 522 189 18 36 chr5 167951611 167951722 -35133810 - FLAM_A SINE Alu -2 140 32 356 279 62 12 chr5 167951726 167951887 -35133645 + Charlie8 DNA MER1_type 99 267 -2150 2728 178 60 117 chr5 167951929 167952700 -35132832 + LTR8A LTR ERV1 1 727 0 313 203 68 0 chr5 167952715 167952789 -35132743 + Charlie8 DNA MER1_type 2339 2417 0 2388 293 118 22 chr5 167952886 167953537 -35131995 + L2 LINE L2 1812 2603 -711 2116 178 49 68 chr5 167953537 167954010 -35131522 + MLT2C2 LTR ERVL 1 464 0 2388 293 118 22 chr5 167954010 167954405 -35131127 + L2 LINE L2 2603 2959 -355 407 243 157 7 chr5 167955169 167955309 -35130223 + MIR SINE MIR 91 251 -11 256 319 154 16 chr5 167955659 167955847 -35129685 - L3 LINE CR1 -1014 563 350 1865 102 28 0 chr5 167955893 167956177 -35129355 - L1MA6 LINE L1 0 6300 6009 306 214 270 0 chr5 167957472 167957561 -35127971 + MER81 DNA DNA 1 113 -1 440 254 134 35 chr5 167958209 167958410 -35127122 + MIR SINE MIR 28 248 -14 207 0 0 0 chr5 167958631 167958654 -35126878 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 520 309 16 16 chr5 167958961 167959152 -35126380 + MIR SINE MIR 69 259 -3 378 271 28 25 chr5 167960636 167960775 -35124757 + MIR3 SINE MIR 61 201 -7 1561 192 28 43 chr5 167961248 167961623 -35123909 + L1ME LINE L1 5188 5586 -580 459 232 110 7 chr5 167961692 167961847 -35123685 - MLT1K LTR MaLR -47 541 371 504 320 169 9 chr5 167961949 167962168 -35123364 - MLT1K LTR MaLR -238 350 97 202 254 127 28 chr5 167962176 167962247 -35123285 - MIR SINE MIR -172 90 13 802 105 0 0 chr5 167962313 167962418 -35123114 + U6 snRNA snRNA 3 107 0 1102 78 0 0 chr5 167962424 167962565 -35122967 + L1PA11 LINE L1 6030 6170 -4 313 198 63 164 chr5 167962596 167962834 -35122698 + L1MC4 LINE L1 7557 7770 -272 25 65 0 0 chr5 167962882 167962928 -35122604 + AT_rich Low_complexity Low_complexity 1 46 0 212 322 17 35 chr5 167963334 167963449 -35122083 - MER5A DNA MER1_type -6 183 71 2718 98 3 0 chr5 167963488 167963866 -35121666 + L1PA14 LINE L1 5783 6161 0 232 260 39 13 chr5 167963906 167963983 -35121549 - L1ME3A LINE L1 -17 6153 6075 * 1008 256 100 63 chr5 167963977 167964038 -35121494 - L1ME3A LINE L1 -314 5856 5799 693 181 0 15 chr5 167964038 167964171 -35121361 - FLAM_C SINE Alu 0 133 3 1008 256 100 63 chr5 167964171 167964906 -35120626 - L1ME3A LINE L1 -371 5799 5031 677 258 77 24 chr5 167965163 167965411 -35120121 - MER102a DNA MER1_type -30 300 40 292 242 77 0 chr5 167965480 167965571 -35119961 + MER5A DNA MER1_type 9 106 -83 282 239 128 43 chr5 167965642 167965759 -35119773 + MER5B DNA MER1_type 4 130 -48 2319 110 22 8 chr5 167965777 167966142 -35119390 - L1MA3 LINE L1 0 6305 5936 194 271 0 17 chr5 167966160 167966219 -35119313 + MER5B DNA MER1_type 120 177 -1 224 287 18 90 chr5 167966220 167966387 -35119145 - MIR3 SINE MIR -48 160 6 210 309 177 11 chr5 167966601 167966776 -35118756 + L3 LINE CR1 812 1015 -562 1742 197 0 7 chr5 167968220 167968520 -35117012 + AluJb SINE Alu 1 298 -14 217 322 0 0 chr5 167968577 167968636 -35116896 + L2 LINE L2 3214 3272 0 293 128 0 0 chr5 167969232 167969271 -35116261 - 5S rRNA rRNA -79 42 4 292 333 25 59 chr5 167970105 167970175 -35115357 - MIR SINE MIR -14 248 177 1649 153 6 57 chr5 167970175 167970489 -35115043 - AluJb SINE Alu -14 298 1 292 333 25 59 chr5 167970489 167970622 -35114910 - MIR SINE MIR -85 177 52 615 289 36 32 chr5 167971114 167971394 -35114138 + L2 LINE L2 3030 3310 -3 225 261 0 80 chr5 167972158 167972246 -35113286 + L2 LINE L2 3233 3313 0 186 203 348 0 chr5 167972355 167972424 -35113108 + MIR SINE MIR 75 167 -95 938 148 97 15 chr5 167972465 167972661 -35112871 - L1MB4 LINE L1 0 6180 5969 27 29 0 0 chr5 167973118 167973152 -35112380 + AT_rich Low_complexity Low_complexity 1 34 0 567 295 13 39 chr5 167973310 167973432 -35112100 + MIR SINE MIR 33 148 -114 575 216 64 23 chr5 167973432 167973603 -35111929 - MER104 DNA MER2_type 0 180 3 567 295 13 39 chr5 167973603 167973714 -35111818 + MIR SINE MIR 148 260 -2 2307 53 3 21 chr5 167974029 167974312 -35111220 + AluSc SINE Alu 1 278 -31 183 42 0 0 chr5 167974315 167974339 -35111193 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 828 298 80 19 chr5 167974370 167974884 -35110648 + L1ME4a LINE L1 5529 6073 -48 571 242 28 106 chr5 167974985 167975283 -35110249 - L1MC4a LINE L1 -332 5822 5666 387 303 59 33 chr5 167977483 167977635 -35107897 + MER5B DNA MER1_type 17 172 -6 21 0 0 0 chr5 167978042 167978063 -35107469 + AT_rich Low_complexity Low_complexity 1 21 0 201 236 222 14 chr5 167978850 167978922 -35106610 - MER5A DNA MER1_type -63 126 40 * 226 313 12 12 chr5 167978860 167978943 -35106589 + MER5A DNA MER1_type 101 183 -6 256 262 33 0 chr5 167979681 167979742 -35105790 - Charlie8 DNA MER1_type -2354 63 1 274 160 20 0 chr5 167979807 167979857 -35105675 + L2 LINE L2 3222 3272 0 430 339 67 8 chr5 167980159 167980398 -35105134 + MIR SINE MIR 2 254 -8 391 221 117 35 chr5 167980883 167981028 -35104504 - MIR SINE MIR -2 260 104 422 269 23 0 chr5 167983135 167983265 -35102267 - MER5B DNA MER1_type -40 138 6 634 231 6 19 chr5 167983784 167983944 -35101588 + MIR SINE MIR 73 230 -32 339 267 40 47 chr5 167985125 167985275 -35100257 - L1MEd LINE L1 -2902 3227 3079 1248 285 92 58 chr5 167985441 167986648 -35098884 - L1MEd LINE L1 -4862 1257 10 281 363 20 0 chr5 167986794 167986896 -35098636 + MIR SINE MIR 37 140 -68 343 263 21 0 chr5 167987288 167987383 -35098149 + MIR SINE MIR 102 198 -64 186 233 117 0 chr5 167991032 167991092 -35094440 + MIR3 SINE MIR 119 185 -23 846 234 75 9 chr5 167993519 167993733 -35091799 + MIR SINE MIR 20 247 -15 237 269 15 0 chr5 167994627 167994694 -35090838 + CT-rich Low_complexity Low_complexity 3 70 0 259 241 222 9 chr5 167995300 167995408 -35090124 + MIR3 SINE MIR 30 160 -48 1875 112 4 8 chr5 167996133 167996391 -35089141 + AluSx SINE Alu 44 300 -12 31 0 0 0 chr5 167996552 167996583 -35088949 + AT_rich Low_complexity Low_complexity 1 31 0 4243 216 70 12 chr5 167996759 167998161 -35087371 - L1M4 LINE L1 -2740 3904 2425 2526 224 45 34 chr5 167998174 167998294 -35087238 - L1M4 LINE L1 -5871 671 554 270 0 0 0 chr5 167998294 167998324 -35087208 + (TG)n Simple_repeat Simple_repeat 2 31 0 2526 224 45 34 chr5 167998324 167998846 -35086686 - L1M4 LINE L1 -5988 554 22 253 229 105 38 chr5 167999539 167999644 -35085888 - L2 LINE L2 -218 3054 2943 2049 129 47 44 chr5 167999729 168000092 -35085440 + THE1B LTR MaLR 1 364 0 1045 242 28 0 chr5 168000379 168000594 -35084938 - MER58A DNA MER1_type -3 221 1 309 333 101 0 chr5 168001199 168001328 -35084204 - L2 LINE L2 -8 3264 3123 2693 40 0 0 chr5 168001486 168001789 -35083743 - AluY SINE Alu -3 308 6 22 0 0 0 chr5 168001854 168001876 -35083656 + AT_rich Low_complexity Low_complexity 1 22 0 468 263 116 36 chr5 168002135 168002359 -35083173 + MIR SINE MIR 19 260 -2 212 277 76 50 chr5 168002481 168002600 -35082932 + MIR SINE MIR 124 245 -17 391 337 16 22 chr5 168004106 168004290 -35081242 - MER5A DNA MER1_type 0 189 7 361 310 43 0 chr5 168004325 168004441 -35081091 + MIR3 SINE MIR 40 160 -48 184 371 22 11 chr5 168004441 168004530 -35081002 - MER5B DNA MER1_type 0 178 89 209 180 40 20 chr5 168004792 168004842 -35080690 - MER5B DNA MER1_type -126 52 2 2264 100 79 12 chr5 168005157 168005498 -35080034 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr5 168005557 168005578 -35079954 + AT_rich Low_complexity Low_complexity 1 21 0 659 256 45 5 chr5 168005588 168005787 -35079745 - MIR SINE MIR -10 252 46 403 291 0 37 chr5 168006500 168006634 -35078898 + MIR SINE MIR 4 132 -130 640 289 78 13 chr5 168006954 168007186 -35078346 - MIR SINE MIR -10 252 6 191 333 13 13 chr5 168007202 168007277 -35078255 - MIR3 SINE MIR -24 184 110 38 0 0 0 chr5 168008794 168008832 -35076700 + AT_rich Low_complexity Low_complexity 1 38 0 277 287 19 0 chr5 168008885 168008993 -35076539 - MER113 DNA MER1_type? -407 114 5 230 260 39 0 chr5 168009059 168009136 -35076396 - L2 LINE L2 -1 3312 3233 305 230 0 0 chr5 168009159 168009226 -35076306 - MIR SINE MIR -65 143 88 632 263 49 29 chr5 168009851 168010094 -35075438 + MIR SINE MIR 6 253 -9 377 286 99 21 chr5 168011317 168011509 -35074023 + L2 LINE L2 3107 3313 0 1604 178 24 3 chr5 168012357 168012644 -35072888 - AluJb SINE Alu -1 311 19 618 294 102 63 chr5 168013107 168013596 -35071936 - MLT1K LTR MaLR -10 578 71 255 31 0 0 chr5 168013624 168013656 -35071876 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 206 277 59 42 chr5 168014009 168014128 -35071404 - MIR3 SINE MIR -28 180 60 922 173 6 0 chr5 168014773 168014929 -35070603 - FRAM SINE Alu -8 168 12 1214 240 111 49 chr5 168015007 168015513 -35070019 - MLT1F1 LTR MaLR -36 557 1 609 229 53 0 chr5 168015563 168015733 -35069799 + MER5A DNA MER1_type 9 187 -2 383 333 7 14 chr5 168015758 168015905 -35069627 - MER5A DNA MER1_type -18 171 26 231 287 64 53 chr5 168016273 168016367 -35069165 - L3 LINE CR1 -11 1566 1472 326 299 145 43 chr5 168016445 168016749 -35068783 - L3 LINE CR1 -390 1187 853 204 179 0 0 chr5 168017440 168017479 -35068053 + (TG)n Simple_repeat Simple_repeat 2 40 0 322 282 0 29 chr5 168017595 168017698 -35067834 + MIR SINE MIR 42 141 -67 321 223 55 9 chr5 168017802 168017917 -35067615 - MIR SINE MIR -62 146 37 224 244 0 0 chr5 168017973 168018018 -35067514 + (TATG)n Simple_repeat Simple_repeat 2 46 0 768 264 58 30 chr5 168018039 168018402 -35067130 + MER113 DNA MER1_type? 78 450 -71 275 291 40 66 chr5 168018572 168018947 -35066585 - L2 LINE L2 -219 3053 2616 574 185 164 7 chr5 168018954 168019100 -35066432 - L1MD3 LINE L1 -176 7819 7651 305 232 85 12 chr5 168019226 168019308 -35066224 + MIR SINE MIR 32 119 -143 211 241 25 32 chr5 168019463 168019546 -35065986 + MIR SINE MIR 47 131 -77 256 299 169 43 chr5 168020406 168020613 -35064919 + MER112 DNA MER1_type 28 260 0 260 316 140 18 chr5 168020790 168020961 -35064571 - MIR SINE MIR -70 192 1 287 262 109 50 chr5 168020969 168021190 -35064342 + L3 LINE CR1 697 930 -647 1694 163 0 58 chr5 168022372 168022685 -35062847 - AluJb SINE Alu -17 295 1 541 282 20 45 chr5 168022757 168022959 -35062573 + L2 LINE L2 3117 3313 0 291 292 24 77 chr5 168024122 168024331 -35061201 - MIR SINE MIR -19 243 46 668 217 117 0 chr5 168024455 168024635 -35060897 + MIR SINE MIR 62 262 0 314 271 52 25 chr5 168025731 168025867 -35059665 + MIR SINE MIR 2 144 -64 198 0 0 0 chr5 168025903 168025925 -35059607 + (A)n Simple_repeat Simple_repeat 1 22 0 597 268 78 0 chr5 168026228 168026381 -35059151 + MIR SINE MIR 13 177 -85 239 284 83 9 chr5 168026454 168026563 -35058969 - MIR3 SINE MIR -11 197 81 602 297 11 0 chr5 168027558 168027740 -35057792 + MIR SINE MIR 78 261 -1 713 339 8 8 chr5 168027773 168028024 -35057508 - MIR SINE MIR -4 258 8 192 125 0 0 chr5 168028548 168028580 -35056952 + (CA)n Simple_repeat Simple_repeat 2 33 0 559 316 24 5 chr5 168029114 168029326 -35056206 + MIR SINE MIR 47 262 0 1006 238 79 83 chr5 168029701 168030219 -35055313 - MLT1F LTR MaLR -21 521 6 2555 212 58 7 chr5 168030842 168031441 -35054091 + L1ME1 LINE L1 5531 6160 -6 291 316 0 0 chr5 168032175 168032251 -35053281 - MER117 DNA MER1_type -92 105 30 29 60 0 0 chr5 168032270 168032320 -35053212 + AT_rich Low_complexity Low_complexity 1 50 0 1546 177 33 0 chr5 168032321 168032621 -35052911 + L1M3c LINE L1 1312 1621 -4520 370 191 232 54 chr5 168032661 168032829 -35052703 - MLT1K LTR MaLR -42 546 349 295 305 25 54 chr5 168033554 168033757 -35051775 - MIR3 SINE MIR -10 198 2 1204 284 68 20 chr5 168033925 168034485 -35051047 - L1MC4a LINE L1 -1799 6009 5423 303 289 170 0 chr5 168034627 168034786 -35050746 - L2 LINE L2 -7 3306 3121 315 0 0 0 chr5 168035994 168036029 -35049503 + (CAA)n Simple_repeat Simple_repeat 2 36 0 341 218 45 45 chr5 168036241 168036374 -35049158 + L2 LINE L2 3139 3271 -1 249 239 0 28 chr5 168036402 168036473 -35049059 - L2 LINE L2 -7 3306 3238 441 138 0 0 chr5 168036757 168036837 -35048695 + (GA)n Simple_repeat Simple_repeat 1 80 0 855 209 62 0 chr5 168037004 168037181 -35048351 + MER58A DNA MER1_type 37 224 0 374 325 25 12 chr5 168037493 168037653 -35047879 + L2 LINE L2 2894 3055 -217 853 272 142 19 chr5 168037799 168038325 -35047207 - L2 LINE L2 0 3313 2722 306 217 0 0 chr5 168038534 168038603 -35046929 + MER5A DNA MER1_type 41 109 -80 312 280 182 8 chr5 168038771 168038903 -35046629 - MER5A DNA MER1_type -9 180 26 425 266 89 18 chr5 168039028 168039197 -35046335 + MIR SINE MIR 79 259 -3 506 232 13 33 chr5 168039964 168040115 -35045417 - L2 LINE L2 -1 3312 3165 7710 29 0 0 chr5 168040281 168041220 -35044312 - L1PA4 LINE L1 -3 6152 5213 526 263 117 0 chr5 168041704 168041883 -35043649 + MIR SINE MIR 19 218 -44 577 278 117 63 chr5 168042291 168042770 -35042762 - L2 LINE L2 0 3313 2809 183 225 0 25 chr5 168098783 168098823 -34986709 + L3 LINE CR1 1520 1558 -19 2510 78 0 0 chr5 168098926 168099235 -34986297 - AluSq SINE Alu -3 310 2 692 289 108 48 chr5 168100281 168100596 -34984936 + L3 LINE CR1 1214 1547 -30 188 217 203 0 chr5 168100709 168100778 -34984754 + MIR3 SINE MIR 87 169 -39 241 250 48 67 chr5 168101593 168101697 -34983835 - L2 LINE L2 0 3272 3171 244 239 42 0 chr5 168101796 168101867 -34983665 - MER5A DNA MER1_type -88 101 28 275 329 40 20 chr5 168103395 168103544 -34981988 - MIR SINE MIR -13 249 98 814 258 70 13 chr5 168105306 168105754 -34979778 - LTR33 LTR ERVL 0 521 10 349 313 108 14 chr5 168106312 168106526 -34979006 + L2 LINE L2 3079 3312 -1 2331 95 0 20 chr5 168106844 168107150 -34978382 + AluSx SINE Alu 1 300 -12 304 274 71 103 chr5 168107324 168107472 -34978060 - MIR SINE MIR -1 261 123 1162 211 128 60 chr5 168107472 168107740 -34977792 - MLT1C LTR MaLR -1 466 155 2422 89 0 10 chr5 168107740 168108053 -34977479 - AluY SINE Alu -1 310 1 1162 211 128 60 chr5 168108053 168108220 -34977312 - MLT1C LTR MaLR -312 155 1 304 274 71 103 chr5 168108220 168108323 -34977209 - MIR SINE MIR -139 123 18 214 286 245 0 chr5 168108806 168108904 -34976628 + MIR SINE MIR 138 259 -3 294 246 172 30 chr5 168109916 168110050 -34975482 + MIR SINE MIR 2 154 -108 321 299 167 7 chr5 168110866 168111010 -34974522 + MIR SINE MIR 90 256 -6 551 348 71 30 chr5 168112117 168112456 -34973076 + L2 LINE L2 2920 3272 0 332 235 135 88 chr5 168112746 168112916 -34972616 - MER5B DNA MER1_type 0 178 1 302 255 168 7 chr5 168113766 168113915 -34971617 - MIR SINE MIR 0 262 90 364 232 116 11 chr5 168113937 168114032 -34971500 + L2 LINE L2 3205 3309 -4 234 298 71 89 chr5 168114227 168114395 -34971137 - L2 LINE L2 -31 3241 3077 609 215 5 75 chr5 168114398 168114584 -34970948 - MLT1K LTR MaLR -2 586 414 561 83 0 0 chr5 168114593 168114677 -34970855 + (TC)n Simple_repeat Simple_repeat 1 84 0 928 241 173 19 chr5 168114677 168115046 -34970486 - MLT1K LTR MaLR -158 430 5 431 270 230 10 chr5 168115569 168115769 -34969763 + MIR SINE MIR 13 256 -6 295 212 12 59 chr5 168116390 168116475 -34969057 - MIR SINE MIR -12 250 170 * 567 262 52 15 chr5 168116468 168116617 -34968915 + MIR SINE MIR 22 174 -62 338 89 0 18 chr5 168117385 168117441 -34968091 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 291 328 69 35 chr5 168117748 168117864 -34967668 + MIR3 SINE MIR 41 160 -48 297 326 0 0 chr5 168117892 168117981 -34967551 + MER117 DNA MER1_type 30 118 -79 218 262 66 0 chr5 168117988 168118049 -34967483 - L2 LINE L2 -260 3053 2989 248 224 0 17 chr5 168118135 168118193 -34967339 - MER117 DNA MER1_type -110 87 31 640 256 56 37 chr5 168118231 168118446 -34967086 - L2 LINE L2 -426 2888 2670 263 301 133 76 chr5 168118722 168119085 -34966447 - L2 LINE L2 -660 2654 2313 1627 194 43 17 chr5 168119085 168119384 -34966148 + AluJb SINE Alu 1 307 -5 263 301 133 76 chr5 168119384 168119824 -34965708 - L2 LINE L2 -1001 2313 1805 631 230 34 34 chr5 168120069 168120252 -34965280 - MIR3 SINE MIR -21 187 13 189 270 99 72 chr5 168120267 168120378 -34965154 + MIR SINE MIR 7 120 -142 817 275 61 26 chr5 168120488 168120895 -34964637 - MLT1K LTR MaLR -123 465 3 193 209 0 47 chr5 168120895 168120938 -34964594 + L2 LINE L2 3217 3257 -15 1028 244 105 6 chr5 168122466 168122790 -34962742 + MER113 DNA MER1_type? 166 521 0 261 145 65 32 chr5 168122807 168122869 -34962663 + MIR3 SINE MIR 118 181 -27 223 236 55 0 chr5 168123998 168124053 -34961479 - L2 LINE L2 0 3272 3215 350 235 214 8 chr5 168125110 168125239 -34960293 + MER5A DNA MER1_type 21 189 0 319 282 77 50 chr5 168125352 168125533 -34959999 + MER5A DNA MER1_type 2 187 -2 429 200 61 35 chr5 168126575 168126690 -34958842 - MIR3 SINE MIR -78 130 13 379 284 112 8 chr5 168126905 168127039 -34958493 + MIR3 SINE MIR 49 196 -12 375 247 183 0 chr5 168127447 168127540 -34957992 - L2 LINE L2 -1 3271 3162 273 304 116 27 chr5 168127781 168128005 -34957527 - L2 LINE L2 -459 2855 2612 1730 168 17 20 chr5 168128180 168128472 -34957060 + AluJo SINE Alu 2 292 -20 636 303 25 21 chr5 168128885 168129123 -34956409 - MLT1K LTR MaLR 0 588 350 3692 167 22 0 chr5 168129130 168129772 -34955760 + L1MB5 LINE L1 5519 6174 0 281 295 140 16 chr5 168129788 168129981 -34955551 - MLT1K LTR MaLR -367 221 5 207 283 22 0 chr5 168130369 168130415 -34955117 - MIR SINE MIR -98 110 64 269 264 0 112 chr5 168130680 168130708 -34954824 + L3 LINE CR1 1358 1388 -189 2448 86 3 0 chr5 168130708 168131012 -34954520 + AluY SINE Alu 1 305 -6 269 264 0 112 chr5 168131012 168131108 -34954424 + L3 LINE CR1 1388 1468 -109 360 0 0 0 chr5 168131158 168131198 -34954334 + (CA)n Simple_repeat Simple_repeat 2 41 0 520 239 182 19 chr5 168131279 168131488 -34954044 - MIR SINE MIR 0 262 20 672 260 65 15 chr5 168131551 168131751 -34953781 - MIR SINE MIR -1 261 52 238 279 16 0 chr5 168131860 168131921 -34953611 - L2 LINE L2 -3 3269 3208 665 308 49 4 chr5 168133003 168133250 -34952282 - MIR SINE MIR -3 259 2 215 314 8 74 chr5 168133294 168133415 -34952117 - L2 LINE L2 -182 3131 3019 212 292 97 0 chr5 168133438 168133510 -34952022 - L2 LINE L2 0 3313 3235 224 246 77 15 chr5 168135218 168135283 -34950249 - MIR SINE MIR -98 110 42 650 317 24 48 chr5 168135602 168135851 -34949681 + MIR SINE MIR 20 262 0 192 309 171 7 chr5 168135854 168136006 -34949526 - L2 LINE L2 -188 3084 2908 2360 108 40 8 chr5 168136133 168136486 -34949046 - THE1B LTR MaLR 0 364 1 462 255 40 20 chr5 168137097 168137246 -34948286 + MER5B DNA MER1_type 24 175 -3 192 36 0 0 chr5 168137344 168137372 -34948160 - L2 LINE L2 0 3313 3286 * 363 334 27 15 chr5 168137366 168137503 -34948029 - MIR SINE MIR -62 146 15 1013 273 21 92 chr5 168137606 168138082 -34947450 - L2 LINE L2 -42 3271 2830 805 187 39 7 chr5 168138483 168138638 -34946894 - MER20 DNA MER1_type -59 160 1 229 317 99 30 chr5 168138640 168138741 -34946791 + L3 LINE CR1 1446 1553 -24 312 263 89 67 chr5 168138758 168138937 -34946595 - MIR3 SINE MIR -18 190 8 367 298 10 0 chr5 168139280 168139384 -34946148 + MIR SINE MIR 39 143 -119 570 252 0 0 chr5 168139451 168139566 -34945966 - L2 LINE L2 -2 3311 3197 463 252 44 7 chr5 168140008 168140143 -34945389 + MIR3 SINE MIR 7 146 -62 635 326 27 84 chr5 168140158 168140596 -34944936 - L2 LINE L2 -1 3271 2859 255 79 0 0 chr5 168141425 168141463 -34944069 + (TAA)n Simple_repeat Simple_repeat 2 39 0 189 94 0 0 chr5 168141475 168141507 -34944025 + (TTA)n Simple_repeat Simple_repeat 2 33 0 573 282 13 6 chr5 168141519 168141675 -34943857 - MIR SINE MIR -18 244 88 241 224 0 17 chr5 168141826 168141884 -34943648 + Charlie4 DNA MER1_type 1898 1954 -7 216 0 0 0 chr5 168141995 168142019 -34943513 + (T)n Simple_repeat Simple_repeat 1 24 0 382 250 158 66 chr5 168142781 168143009 -34942523 - MLT1K LTR MaLR -2 586 338 408 256 24 40 chr5 168143144 168143269 -34942263 + MIR SINE MIR 106 228 -34 223 227 0 0 chr5 168143545 168143589 -34941943 + MIR SINE MIR 218 261 -1 933 257 14 0 chr5 168144040 168144250 -34941282 - MIR SINE MIR 0 262 50 2238 160 12 7 chr5 168144472 168144878 -34940654 - L1MB5 LINE L1 0 6174 5767 346 278 31 41 chr5 168144890 168144902 -34940630 + L1MC4 LINE L1 6608 6619 -1423 2383 114 31 6 chr5 168144902 168145261 -34940271 - L1PB1 LINE L1 -2 6149 5782 346 278 31 41 chr5 168145261 168145345 -34940187 + L1MC4 LINE L1 6619 6703 -1339 397 86 0 0 chr5 168145350 168145408 -34940124 - L1PB1 LINE L1 -360 5791 5734 2182 105 7 3 chr5 168145538 168145832 -34939700 + AluSc SINE Alu 1 295 -14 2468 92 3 0 chr5 168146122 168146426 -34939106 + AluSp SINE Alu 1 305 -8 375 267 55 55 chr5 168146873 168147038 -34938494 + MER5A DNA MER1_type 16 180 -9 268 287 198 0 chr5 168147186 168147287 -34938245 - L2 LINE L2 0 3313 3193 372 310 215 28 chr5 168147345 168147671 -34937861 - L3 LINE CR1 0 1577 1191 264 230 35 58 chr5 168147775 168147862 -34937670 - L2 LINE L2 -6 3307 3223 193 267 33 33 chr5 168148209 168148269 -34937263 - MIR3 SINE MIR -17 191 132 397 309 161 12 chr5 168148690 168148852 -34936680 - MIR3 SINE MIR -4 204 19 299 111 0 0 chr5 168149432 168149477 -34936055 - L2 LINE L2 0 3313 3269 234 367 50 22 chr5 168149503 168149642 -34935890 - L2 LINE L2 -5 3308 3166 190 338 38 0 chr5 168150183 168150263 -34935269 + MIR SINE MIR 147 229 -33 185 377 65 35 chr5 168150424 168150623 -34934909 - MIR SINE MIR -50 212 8 1285 187 130 55 chr5 168151064 168151358 -34934174 + MER113 DNA MER1_type? 6 351 -170 2147 145 0 0 chr5 168151358 168151662 -34933870 + AluSx SINE Alu 1 304 -8 1285 187 130 55 chr5 168151662 168151843 -34933689 + MER113 DNA MER1_type? 351 517 -4 254 333 0 23 chr5 168151869 168151956 -34933576 - MIR3 SINE MIR -9 199 115 450 328 0 0 chr5 168152724 168152843 -34932689 - L2 LINE L2 -5 3267 3149 402 328 94 6 chr5 168153115 168153286 -34932246 + L3 LINE CR1 1365 1550 -27 477 318 57 66 chr5 168153295 168153628 -34931904 - L2 LINE L2 0 3272 2943 304 288 0 0 chr5 168153905 168153978 -34931554 + L3 LINE CR1 900 972 -605 299 285 181 42 chr5 168154355 168154548 -34930984 + L3 LINE CR1 1167 1386 -191 666 259 17 23 chr5 168154653 168154827 -34930705 + MIR SINE MIR 90 262 0 384 343 83 0 chr5 168154959 168155128 -34930404 + MIR SINE MIR 72 254 -8 224 276 17 0 chr5 168155132 168155190 -34930342 + MIR3 SINE MIR 149 207 -1 489 223 139 12 chr5 168155600 168155766 -34929766 + Charlie8 DNA MER1_type 76 262 -2155 334 278 61 9 chr5 168156179 168156294 -34929238 + MIR SINE MIR 16 136 -72 826 268 67 13 chr5 168156393 168156692 -34928840 + MER102b DNA MER1_type 2 316 -25 227 317 29 41 chr5 168156785 168156971 -34928561 + MIR SINE MIR 14 200 -8 281 368 24 0 chr5 168158498 168158623 -34926909 + MIR SINE MIR 10 137 -125 632 274 41 63 chr5 168158625 168158895 -34926637 - L2 LINE L2 -41 3272 3009 1763 110 0 0 chr5 168158900 168159128 -34926404 + AluSg SINE Alu 1 228 -82 379 293 32 8 chr5 168159441 168159564 -34925968 - MIR SINE MIR -59 203 78 352 271 108 35 chr5 168160142 168160400 -34925132 + L1MC4 LINE L1 7764 8040 -2 1909 151 20 3 chr5 168160570 168160862 -34924670 + AluSx SINE Alu 1 297 -15 356 224 19 0 chr5 168161045 168161152 -34924380 - L1MC4 LINE L1 -1 8041 7933 233 325 25 0 chr5 168161661 168161741 -34923791 - L2 LINE L2 0 3313 3232 236 250 26 66 chr5 168164632 168164708 -34920824 + MIR3 SINE MIR 107 179 -29 333 0 0 0 chr5 168164774 168164811 -34920721 + (TAA)n Simple_repeat Simple_repeat 2 38 0 376 322 139 10 chr5 168164819 168165027 -34920505 - MIR SINE MIR -15 247 13 944 297 94 8 chr5 168165029 168165410 -34920122 - MLT1L LTR MaLR -2 613 200 230 330 147 0 chr5 168165576 168165685 -34919847 - MER103 DNA DNA -32 134 10 321 231 0 13 chr5 168165714 168165792 -34919740 + HsTC2 DNA Tc2 1 77 -1821 190 307 78 46 chr5 168165927 168166080 -34919452 - L2 LINE L2 -58 3255 3098 387 288 50 25 chr5 168166142 168166302 -34919230 - L2 LINE L2 -345 2969 2806 541 242 183 0 chr5 168166412 168166565 -34918967 + MER5A DNA MER1_type 9 189 0 282 274 29 0 chr5 168167408 168167510 -34918022 + MER113 DNA MER1_type? 1 105 -416 1892 160 3 32 chr5 168167602 168167915 -34917617 - AluJo SINE Alu -4 308 5 180 351 26 0 chr5 168168378 168168455 -34917077 + MIR SINE MIR 1 79 -183 1142 203 0 58 chr5 168168455 168168746 -34916786 + MLT1B LTR MaLR 9 282 -108 624 264 64 32 chr5 168168941 168169255 -34916277 + MLT1K LTR MaLR 264 587 -1 592 243 188 5 chr5 168169900 168170118 -34915414 - MIR SINE MIR -1 261 4 396 288 86 52 chr5 168170150 168170383 -34915149 - MIR SINE MIR -12 250 10 344 342 0 9 chr5 168170436 168170550 -34914982 + MIR3 SINE MIR 60 172 -36 476 274 132 38 chr5 168170828 168171094 -34914438 + MER102b DNA MER1_type 38 328 -13 429 294 49 55 chr5 168171774 168171937 -34913595 - L2 LINE L2 -4 3309 3148 216 395 102 0 chr5 168172079 168172236 -34913296 - L2 LINE L2 -521 2793 2621 209 340 187 10 chr5 168172637 168173022 -34912510 + L2 LINE L2 2857 3309 -4 775 124 0 0 chr5 168173443 168173548 -34911984 + AluJb SINE Alu 14 118 -194 33 25 0 0 chr5 168173550 168173590 -34911942 + AT_rich Low_complexity Low_complexity 1 40 0 1150 45 8 0 chr5 168173718 168173850 -34911682 + AluY SINE Alu 1 133 -178 35 24 0 0 chr5 168173850 168173892 -34911640 + AT_rich Low_complexity Low_complexity 1 42 0 205 237 40 40 chr5 168174083 168174159 -34911373 - MIR SINE MIR -62 200 125 522 125 0 0 chr5 168174199 168174279 -34911253 + MADE1 DNA Mariner 1 80 0 1891 103 16 44 chr5 168174432 168174751 -34910781 + AluSx SINE Alu 1 310 -2 33 25 0 0 chr5 168175918 168175958 -34909574 + GC_rich Low_complexity Low_complexity 1 40 0 240 333 0 36 chr5 168176485 168176569 -34908963 - MIR SINE MIR -75 187 107 280 204 19 0 chr5 168176842 168176896 -34908636 - MIR SINE MIR -100 162 108 1127 209 42 0 chr5 168177740 168177955 -34907577 + MER58A DNA MER1_type 1 224 0 278 148 0 0 chr5 168177971 168178025 -34907507 + MER117 DNA MER1_type 44 97 -100 237 274 68 14 chr5 168178303 168178376 -34907156 - MIR3 SINE MIR -46 162 86 321 298 225 11 chr5 168179502 168179680 -34905852 + MIR SINE MIR 3 218 -44 400 319 30 12 chr5 168180557 168180723 -34904809 - MIR SINE MIR 0 262 94 221 343 154 6 chr5 168180806 168180981 -34904551 - L3 LINE CR1 -76 1501 1301 338 347 218 13 chr5 168181139 168181364 -34904168 - L2 LINE L2 -28 3244 2974 784 211 74 16 chr5 168181371 168181561 -34903971 - MIR SINE MIR -1 261 61 623 251 12 35 chr5 168181953 168182124 -34903408 - MIR SINE MIR -75 187 21 447 226 66 0 chr5 168182182 168182288 -34903244 + MIR SINE MIR 84 196 -66 361 213 67 33 chr5 168182313 168182463 -34903069 + L1ME3A LINE L1 5783 5937 -233 22 0 0 0 chr5 168182464 168182486 -34903046 + AT_rich Low_complexity Low_complexity 1 22 0 198 255 75 64 chr5 168182554 168182648 -34902884 - L2 LINE L2 -459 2855 2761 1675 116 74 74 chr5 168182786 168183097 -34902435 - AluSx SINE Alu -1 311 1 236 254 113 0 chr5 168183112 168183183 -34902349 + MIR SINE MIR 184 262 0 780 294 57 9 chr5 168183453 168183681 -34901851 + MIR SINE MIR 14 252 -10 335 274 101 18 chr5 168184275 168184443 -34901089 - MIR SINE MIR -70 192 11 246 227 84 92 chr5 168185108 168185167 -34900365 + MIR SINE MIR 118 176 -86 2207 87 14 0 chr5 168185167 168185454 -34900078 + AluY SINE Alu 1 291 -20 246 227 84 92 chr5 168185454 168185513 -34900019 + MIR SINE MIR 176 235 -27 507 290 110 10 chr5 168185533 168185733 -34899799 - MIR SINE MIR -4 258 39 290 302 111 53 chr5 168186120 168186461 -34899071 - L2 LINE L2 -80 3233 2873 2368 87 3 0 chr5 168186472 168186770 -34898762 + AluSc SINE Alu 11 309 0 664 286 44 15 chr5 168188393 168188596 -34896936 - MIR SINE MIR -48 214 6 300 306 10 10 chr5 168188654 168188752 -34896780 + MIR3 SINE MIR 67 164 -44 184 282 0 0 chr5 168188762 168188801 -34896731 - L2 LINE L2 -4 3309 3271 482 369 66 4 chr5 168188944 168189185 -34896347 - MIR SINE MIR -4 258 3 385 356 12 12 chr5 168189347 168189507 -34896025 + MER5A DNA MER1_type 2 161 -28 373 290 107 38 chr5 168190095 168190226 -34895306 + MIR3 SINE MIR 24 163 -45 313 277 0 14 chr5 168190733 168190881 -34894651 + GA-rich Low_complexity Low_complexity 3 148 0 694 244 45 15 chr5 168190981 168191182 -34894350 + Charlie1 DNA MER1_type 31 237 -2524 645 140 7 56 chr5 168191167 168191259 -34894273 + Charlie1 DNA MER1_type 2620 2704 -57 * 1823 169 7 7 chr5 168191259 168191549 -34893983 - AluJb SINE Alu -22 290 1 645 140 7 56 chr5 168191549 168191599 -34893933 + Charlie1 DNA MER1_type 2704 2755 -6 206 162 27 0 chr5 168191885 168191922 -34893610 + L2 LINE L2 3227 3264 -8 2549 86 46 38 chr5 168191945 168192317 -34893215 - THE1C LTR MaLR 0 375 1 833 236 114 9 chr5 168193104 168193324 -34892208 - MIR SINE MIR 0 262 20 572 265 25 66 chr5 168193407 168193595 -34891937 + MIR SINE MIR 14 193 -69 427 283 164 9 chr5 168193595 168193821 -34891711 + MIR SINE MIR 2 262 0 598 221 175 0 chr5 168193999 168194153 -34891379 + MER5A DNA MER1_type 9 189 0 205 118 39 0 chr5 168195110 168195161 -34890371 + (CA)n Simple_repeat Simple_repeat 1 53 0 272 345 88 46 chr5 168196111 168196305 -34889227 - MIR SINE MIR -59 203 2 194 0 0 37 chr5 168196646 168196673 -34888859 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 427 261 92 8 chr5 168196803 168196933 -34888599 + MIR3 SINE MIR 20 160 -48 604 248 71 12 chr5 168197038 168197226 -34888306 - MIR SINE MIR -33 229 32 267 330 155 0 chr5 168197945 168198048 -34887484 + MIR3 SINE MIR 43 161 -47 226 180 20 0 chr5 168198399 168198449 -34887083 + (TA)n Simple_repeat Simple_repeat 2 52 0 2325 153 30 28 chr5 168199067 168199526 -34886006 - L1MB5 LINE L1 0 6174 5715 253 282 256 13 chr5 168200210 168200366 -34885166 + MIR SINE MIR 47 240 -22 * 535 285 140 18 chr5 168200329 168200550 -34884982 - MIR SINE MIR 0 262 15 447 256 26 8 chr5 168200700 168200817 -34884715 + MER5A DNA MER1_type 64 182 -7 409 34 34 0 chr5 168201088 168201147 -34884385 + (CA)n Simple_repeat Simple_repeat 2 62 0 441 291 53 13 chr5 168201778 168201929 -34883603 + MIR3 SINE MIR 13 169 -39 541 264 86 23 chr5 168201969 168202143 -34883389 - MIR SINE MIR -1 261 77 2280 110 0 0 chr5 168202180 168202472 -34883060 + AluSx SINE Alu 1 292 -20 393 22 0 0 chr5 168203027 168203073 -34882459 + (TC)n Simple_repeat Simple_repeat 2 47 0 2084 121 28 3 chr5 168203089 168203379 -34882153 + AluSx SINE Alu 1 297 -15 322 249 77 77 chr5 168203451 168203632 -34881900 - L1ME4a LINE L1 0 6121 5941 1559 233 55 55 chr5 168203895 168204028 -34881504 - L1M4 LINE L1 -1961 4185 4053 1734 166 0 53 chr5 168204028 168204330 -34881202 + AluJo SINE Alu 1 286 -26 1559 233 55 55 chr5 168204330 168204762 -34880770 - L1M4 LINE L1 -2092 4054 3620 183 246 66 0 chr5 168204976 168205037 -34880495 - L3 LINE CR1 -337 1240 1176 434 275 50 90 chr5 168205568 168205790 -34879742 - L3 LINE CR1 -72 1505 1293 * 754 252 56 43 chr5 168205788 168206022 -34879510 - MIR SINE MIR 0 262 26 428 242 27 74 chr5 168206025 168206174 -34879358 + MIR SINE MIR 2 143 -119 225 296 247 0 chr5 168206596 168206758 -34878774 + MIR SINE MIR 7 208 -54 384 260 24 41 chr5 168206979 168207102 -34878430 - MIR SINE MIR -79 183 63 292 203 87 14 chr5 168207527 168207596 -34877936 + L2 LINE L2 3199 3272 0 1825 159 0 24 chr5 168207738 168208034 -34877498 + AluJb SINE Alu 24 312 0 2411 93 3 0 chr5 168208060 168208362 -34877170 + AluSp SINE Alu 1 303 -10 184 330 71 54 chr5 168208426 168208538 -34876994 - L2 LINE L2 -36 3236 3123 765 247 134 8 chr5 168208563 168208787 -34876745 - MIR SINE MIR -8 254 10 555 294 124 57 chr5 168208825 168209179 -34876353 - L2 LINE L2 -42 3230 2853 230 337 153 0 chr5 168210185 168210283 -34875249 - MIR SINE MIR -82 180 68 258 416 47 12 chr5 168210520 168210775 -34874757 + L2 LINE L2 2522 2785 -529 246 412 50 0 chr5 168210807 168210926 -34874606 + L2 LINE L2 3136 3260 -12 205 178 0 22 chr5 168211761 168211806 -34873726 + MIR SINE MIR 85 128 -80 1934 134 0 0 chr5 168212098 168212390 -34873142 + AluJb SINE Alu 1 292 -20 675 193 10 79 chr5 168213306 168213508 -34872024 - MER53 DNA DNA -1 188 1 292 268 236 13 chr5 168213552 168213709 -34871823 - L3 LINE CR1 -33 1544 1353 384 319 0 34 chr5 168213710 168213829 -34871703 + L2 LINE L2 3199 3313 0 281 314 12 0 chr5 168213857 168213943 -34871589 - L3 LINE CR1 -228 1349 1263 259 320 133 28 chr5 168213951 168214132 -34871400 - MIR3 SINE MIR -6 202 3 23 33 0 0 chr5 168214441 168214471 -34871061 + AT_rich Low_complexity Low_complexity 1 30 0 427 191 21 11 chr5 168214554 168214648 -34870884 - L2 LINE L2 -244 3069 2975 449 362 33 0 chr5 168215251 168215461 -34870071 + MIR SINE MIR 14 230 -32 195 284 84 11 chr5 168216560 168216655 -34868877 + MIR SINE MIR 113 214 -48 1882 148 20 7 chr5 168216662 168216966 -34868566 + AluSx SINE Alu 3 310 -2 1431 161 37 4 chr5 168216972 168217215 -34868317 + AluJb SINE Alu 1 251 -61 324 256 60 34 chr5 168218388 168218505 -34867027 - Charlie8 DNA MER1_type -2246 171 52 423 244 8 63 chr5 168218994 168219121 -34866411 + MIR SINE MIR 33 152 -56 1748 172 120 3 chr5 168219513 168219839 -34865693 - MLT1A1 LTR MaLR 0 365 2 2637 194 27 27 chr5 168219861 168220382 -34865150 - MLT1F LTR MaLR 0 542 22 3510 189 45 2 chr5 168220402 168221000 -34864532 + L1M4b LINE L1 19 642 -6217 1150 212 118 50 chr5 168221000 168221340 -34864192 - MLT1A1 LTR MaLR -2 363 1 4444 146 73 60 chr5 168221340 168221599 -34863933 + L1M4b LINE L1 638 892 -5967 2086 126 0 0 chr5 168221599 168221909 -34863623 + AluSx SINE Alu 1 310 -2 4444 146 73 60 chr5 168221909 168222586 -34862946 + L1M4b LINE L1 892 1586 -5273 464 146 4 0 chr5 168222642 168222725 -34862807 - MLT1A1 LTR MaLR -5 423 278 300 164 43 60 chr5 168222752 168222868 -34862664 + (CTATA)n Simple_repeat Simple_repeat 2 115 0 1911 224 25 20 chr5 168222917 168223471 -34862061 + L1M4b LINE L1 1584 2140 -4819 502 261 90 64 chr5 168223732 168223869 -34861663 + MIR SINE MIR 23 170 -92 2226 86 0 16 chr5 168223869 168224173 -34861359 + AluSx SINE Alu 1 299 -13 502 261 90 64 chr5 168224173 168224269 -34861263 + MIR SINE MIR 170 262 0 593 203 10 106 chr5 168224503 168224710 -34860822 - MIR SINE MIR 0 262 76 194 200 27 164 chr5 168224862 168224972 -34860560 - MIR SINE MIR -82 180 86 256 102 41 0 chr5 168225285 168225334 -34860198 + CT-rich Low_complexity Low_complexity 2 52 0 393 214 117 0 chr5 168225945 168226048 -34859484 + L3 LINE CR1 1282 1396 -181 680 239 19 56 chr5 168226071 168226284 -34859248 + L2 LINE L2 3101 3305 -8 23 0 0 0 chr5 168226290 168226313 -34859219 + AT_rich Low_complexity Low_complexity 1 23 0 762 174 0 51 chr5 168226497 168226635 -34858897 + FLAM_C SINE Alu 1 131 -2 37 23 0 0 chr5 168226635 168226679 -34858853 + AT_rich Low_complexity Low_complexity 1 44 0 2427 67 0 0 chr5 168226681 168226980 -34858552 + AluY SINE Alu 1 299 -12 641 278 149 11 chr5 168227039 168227455 -34858077 - MLT1K LTR MaLR -19 569 86 2113 107 3 0 chr5 168227457 168227748 -34857784 + AluSx SINE Alu 1 292 -20 308 290 76 9 chr5 168228282 168228436 -34857096 - MIR SINE MIR -69 139 17 691 281 72 9 chr5 168228504 168228725 -34856807 - MIR SINE MIR 0 262 28 287 109 0 4 chr5 168228728 168228780 -34856752 + AluJb SINE Alu 89 129 -173 297 236 42 0 chr5 168228814 168228886 -34856646 - MIR SINE MIR -33 229 155 446 209 12 12 chr5 168228939 168229025 -34856507 - MER20 DNA MER1_type 0 219 134 675 161 46 23 chr5 168229057 168229187 -34856345 - MER20 DNA MER1_type -76 143 11 342 282 53 82 chr5 168229213 168229419 -34856113 + L2 LINE L2 3114 3313 0 245 252 4 0 chr5 168229418 168229475 -34856057 - MIR SINE MIR -69 139 94 * 258 286 88 0 chr5 168229607 168229698 -34855834 - MIR3 SINE MIR -54 154 56 739 241 108 29 chr5 168229939 168229972 -34855560 + MIR SINE MIR 3 32 -230 1462 151 119 11 chr5 168229972 168230250 -34855282 + AluSg1 SINE Alu 1 308 -1 739 241 108 29 chr5 168230250 168230457 -34855075 + MIR SINE MIR 32 262 0 1944 139 13 0 chr5 168230548 168230850 -34854682 + AluSx SINE Alu 1 306 -6 296 358 16 8 chr5 168231328 168231451 -34854081 - MIR SINE MIR -65 143 20 1227 246 43 9 chr5 168231460 168231785 -34853747 - MER46C DNA MER2_type -2 336 1 2841 122 7 25 chr5 168231785 168232219 -34853313 - MSTC LTR MaLR 0 428 1 36 40 0 0 chr5 168232405 168232455 -34853077 + AT_rich Low_complexity Low_complexity 1 50 0 1497 159 25 21 chr5 168232459 168232742 -34852790 + L1MA9 LINE L1 5960 6243 -69 382 308 38 23 chr5 168232824 168232957 -34852575 - MIR SINE MIR -10 252 118 506 282 164 28 chr5 168232968 168233098 -34852434 - L2 LINE L2 -66 3247 3136 219 69 0 0 chr5 168233098 168233127 -34852405 + (TA)n Simple_repeat Simple_repeat 2 30 0 506 282 164 28 chr5 168233127 168233386 -34852146 - L2 LINE L2 -177 3136 2805 1831 122 3 27 chr5 168233521 168233817 -34851715 + AluJb SINE Alu 1 289 -23 1089 260 84 57 chr5 168233908 168234358 -34851174 - L2 LINE L2 -2 3311 2812 1412 234 36 36 chr5 168234358 168234521 -34851011 - MER58B DNA MER1_type -2079 341 179 2196 80 0 42 chr5 168234521 168234834 -34850698 - AluSg SINE Alu -10 300 1 1412 234 36 36 chr5 168234834 168235007 -34850525 - MER58B DNA MER1_type -2240 180 5 1089 260 84 57 chr5 168235007 168235189 -34850343 - L2 LINE L2 -501 2812 2636 187 277 125 54 chr5 168235125 168235237 -34850295 - MIR3 SINE MIR -39 169 50 * 224 260 13 39 chr5 168236632 168236701 -34848831 - MIR SINE MIR -76 132 66 756 319 36 4 chr5 168236701 168236952 -34848580 + MIR SINE MIR 4 262 0 1228 118 6 0 chr5 168236953 168237122 -34848410 + FAM SINE Alu 1 170 -5 715 242 27 92 chr5 168237352 168237403 -34848129 - MIR SINE MIR -2 260 207 856 180 106 0 chr5 168237403 168237564 -34847968 + MER45A DNA AcHobo 1 178 0 715 242 27 92 chr5 168237564 168237772 -34847760 - MIR SINE MIR -55 207 18 2131 109 7 0 chr5 168237972 168238265 -34847267 + AluSx SINE Alu 1 295 -17 328 267 67 29 chr5 168238341 168238446 -34847086 + MIR SINE MIR 56 164 -98 415 199 199 28 chr5 168238828 168238969 -34846563 - L2 LINE L2 0 3313 3149 304 288 126 0 chr5 168239054 168239165 -34846367 + L2 LINE L2 2601 2725 -589 2662 128 85 71 chr5 168239172 168239749 -34845783 - LTR24B LTR ERV1 0 635 1 2210 80 11 0 chr5 168239802 168240089 -34845443 + AluSx SINE Alu 1 290 -22 263 287 73 7 chr5 168240131 168240267 -34845265 - L2 LINE L2 -83 3230 3086 224 69 0 0 chr5 168241106 168241135 -34844397 - MIR SINE MIR -117 145 117 440 297 41 7 chr5 168241471 168241616 -34843916 - MIR SINE MIR -94 168 19 2540 20 40 0 chr5 168242068 168242367 -34843165 - AluY SINE Alu 0 311 1 261 295 86 9 chr5 168242568 168242673 -34842859 + L2 LINE L2 2920 3032 -281 217 263 81 71 chr5 168243120 168243219 -34842313 + MIR3 SINE MIR 109 208 0 674 208 87 58 chr5 168243280 168243487 -34842045 + MIR SINE MIR 44 256 -6 292 102 82 0 chr5 168244038 168244087 -34841445 + L2 LINE L2 3259 3311 -2 * 740 310 128 47 chr5 168244077 168244338 -34841194 + L3 LINE CR1 1015 1254 -323 2187 100 0 10 chr5 168244338 168244638 -34840894 - AluSq SINE Alu -16 297 1 740 310 128 47 chr5 168244638 168244885 -34840647 + L3 LINE CR1 1254 1564 -13 1763 153 20 0 chr5 168245110 168245404 -34840128 + AluSx SINE Alu 1 300 -12 243 187 0 93 chr5 168247585 168247660 -34837872 - L1MB1 LINE L1 -1 6188 6121 628 117 144 0 chr5 168247660 168247771 -34837761 - FLAM_A SINE Alu -4 129 3 480 208 30 20 chr5 168248809 168248910 -34836622 - AluJb SINE Alu -92 220 119 262 167 0 0 chr5 168248954 168248996 -34836536 - FLAM_A SINE Alu -8 125 84 449 251 224 11 chr5 168249185 168249364 -34836168 + MIR SINE MIR 46 262 0 2143 90 20 3 chr5 168250179 168250479 -34835053 - AluSq SINE Alu -8 305 1 1120 278 213 36 chr5 168250880 168251358 -34834174 + MLT1G1 LTR MaLR 5 587 0 2107 112 3 0 chr5 168251908 168252211 -34833321 - AluSx SINE Alu -8 304 1 1452 152 50 26 chr5 168252258 168252561 -34832971 - AluJo SINE Alu -2 310 1 197 264 44 44 chr5 168253955 168254046 -34831486 - L2 LINE L2 -188 3084 2994 320 272 83 92 chr5 168254154 168254371 -34831161 - L1MC4 LINE L1 -2 8040 7826 259 307 30 10 chr5 168254722 168254823 -34830709 - L2 LINE L2 -185 3087 2985 209 320 84 65 chr5 168255307 168255582 -34829950 + L2 LINE L2 2932 3211 -61 540 289 233 47 chr5 168256273 168256474 -34829058 + L3 LINE CR1 331 493 -1084 1454 133 149 0 chr5 168256474 168256722 -34828810 + AluJb SINE Alu 6 290 -22 540 289 233 47 chr5 168256722 168256970 -34828562 + L3 LINE CR1 493 864 -713 2169 83 3 3 chr5 168256980 168257270 -34828262 - AluSp SINE Alu -22 291 2 1216 169 18 22 chr5 168257341 168257566 -34827966 - MER58A DNA MER1_type 0 224 1 656 230 50 0 chr5 168258280 168258419 -34827113 - MIR3 SINE MIR -43 165 20 304 265 165 18 chr5 168258478 168258648 -34826884 - MIR SINE MIR -34 228 34 907 261 78 27 chr5 168258648 168258943 -34826589 + L1MC4a LINE L1 5602 5911 -1897 677 309 92 16 chr5 168259801 168260118 -34825414 - MER102b DNA MER1_type 0 341 1 438 263 34 8 chr5 168261934 168262052 -34823480 + L2 LINE L2 3193 3313 0 1338 183 13 29 chr5 168262220 168262526 -34823006 - L1MB8 LINE L1 -18 6160 5860 221 319 129 12 chr5 168263020 168263183 -34822349 - MIR3 SINE MIR -18 190 9 215 256 33 141 chr5 168265037 168265158 -34820374 + MER5A DNA MER1_type 19 126 -63 2019 139 17 3 chr5 168265345 168265640 -34819892 - AluSq SINE Alu -14 299 1 285 267 20 10 chr5 168265641 168265742 -34819790 - MLT1K LTR MaLR -6 582 481 260 235 0 0 chr5 168265868 168265919 -34819613 - MLT1K LTR MaLR -370 218 168 270 270 115 34 chr5 168266904 168267052 -34818480 - L2 LINE L2 -3 3269 3110 334 306 0 20 chr5 168267201 168267299 -34818233 - MIR3 SINE MIR -9 199 104 1703 163 13 23 chr5 168268095 168268396 -34817136 - AluJb SINE Alu -2 310 13 645 142 57 161 chr5 168268438 168268649 -34816883 + MER5A DNA MER1_type 1 189 0 391 317 117 0 chr5 168268863 168269008 -34816524 - L3 LINE CR1 -8 1569 1408 1750 156 13 36 chr5 168269128 168269429 -34816103 + AluJb SINE Alu 1 294 -18 476 310 29 17 chr5 168269456 168269630 -34815902 - L3 LINE CR1 -139 1438 1263 205 244 42 118 chr5 168270036 168270155 -34815377 - MIR SINE MIR -74 188 79 512 165 41 10 chr5 168270270 168270367 -34815165 - AluJb SINE Alu -18 294 195 266 291 60 60 chr5 168270515 168270632 -34814900 - L2 LINE L2 -1 3312 3196 190 233 0 23 chr5 168270657 168270700 -34814832 + MIR SINE MIR 108 149 -113 221 155 0 121 chr5 168270723 168270781 -34814751 + MER5A DNA MER1_type 26 76 -113 712 141 247 24 chr5 168270897 168270946 -34814586 - MER3 DNA MER1_type 0 209 172 1867 151 38 10 chr5 168270946 168271238 -34814294 + AluJb SINE Alu 1 300 -12 712 141 247 24 chr5 168271238 168271358 -34814174 - MER3 DNA MER1_type -37 172 2 205 276 35 0 chr5 168271577 168271635 -34813897 - MER5B DNA MER1_type -31 147 88 670 232 87 5 chr5 168271826 168272011 -34813521 - MIR SINE MIR -51 211 12 238 315 169 37 chr5 168272494 168272897 -34812635 + L2 LINE L2 2817 3272 0 2552 50 3 3 chr5 168273203 168273502 -34812030 + AluY SINE Alu 1 299 -12 262 146 143 12 chr5 168274172 168274258 -34811274 - MIR3 SINE MIR -52 156 60 236 290 47 28 chr5 168275105 168275212 -34810320 - MIR3 SINE MIR -37 171 63 576 255 20 13 chr5 168275531 168275684 -34809848 + MIR SINE MIR 106 259 -3 26 30 0 0 chr5 168275694 168275727 -34809805 + AT_rich Low_complexity Low_complexity 1 33 0 188 250 191 0 chr5 168276600 168276684 -34808848 - MER5A DNA MER1_type -33 156 57 328 256 101 36 chr5 168276698 168276866 -34808666 - MIR3 SINE MIR -24 184 6 430 261 118 6 chr5 168277787 168277948 -34807584 - MIR SINE MIR 0 262 84 859 235 30 21 chr5 168278339 168278573 -34806959 + MIR SINE MIR 21 256 -6 21 0 0 0 chr5 168279490 168279511 -34806021 + AT_rich Low_complexity Low_complexity 1 21 0 386 272 68 4 chr5 168279834 168279984 -34805548 + MIR SINE MIR 2 163 -45 316 271 180 0 chr5 168280082 168280204 -34805328 + L3 LINE CR1 1358 1501 -76 1251 130 0 27 chr5 168280251 168280436 -34805096 - AluSg/x SINE Alu -13 299 120 403 179 122 65 chr5 168281628 168281721 -34803811 - L2 LINE L2 0 3313 3210 1946 123 0 8 chr5 168281721 168281982 -34803550 - AluSx SINE Alu -53 259 1 403 179 122 65 chr5 168281982 168282011 -34803521 - L2 LINE L2 -103 3210 3184 1901 165 0 22 chr5 168282466 168282782 -34802750 + AluJo SINE Alu 4 312 0 463 269 8 0 chr5 168283584 168283703 -34801829 - MLT1I LTR MaLR -1 408 289 398 314 69 13 chr5 168283862 168284021 -34801511 + MIR SINE MIR 89 256 -6 575 205 58 70 chr5 168284375 168284546 -34800986 - MIR3 SINE MIR -9 199 31 396 0 0 0 chr5 168285564 168285608 -34799924 + (CA)n Simple_repeat Simple_repeat 1 44 0 52 17 0 0 chr5 168285804 168285863 -34799669 + AT_rich Low_complexity Low_complexity 1 59 0 2051 139 23 0 chr5 168285940 168286241 -34799291 - AluSx SINE Alu -3 309 2 618 260 13 157 chr5 168287002 168287467 -34798065 + L1MC4a LINE L1 5512 5909 -1899 812 170 0 6 chr5 168287883 168288048 -34797484 + (TG)n Simple_repeat Simple_repeat 1 164 0 382 309 166 41 chr5 168288165 168288485 -34797047 + L2 LINE L2 2913 3272 0 297 197 0 0 chr5 168288614 168288680 -34796852 + CT-rich Low_complexity Low_complexity 4 69 0 663 200 7 7 chr5 168288696 168288831 -34796701 + MLT1K LTR MaLR 419 553 -35 7158 178 43 38 chr5 168288879 168289843 -34795689 - Ricksha DNA DNA -7 3239 2281 3074 112 22 20 chr5 168289843 168290350 -34795182 - L1PA15 LINE L1 -3 6162 5655 7158 178 43 38 chr5 168290350 168290637 -34794895 - Ricksha DNA DNA -965 2281 1997 2094 137 0 34 chr5 168290637 168290958 -34794574 - AluSx SINE Alu 0 312 3 7158 178 43 38 chr5 168290958 168291455 -34794077 - Ricksha DNA DNA -1249 1997 1504 1795 168 16 23 chr5 168291455 168291765 -34793767 + AluJb SINE Alu 1 308 -4 7158 178 43 38 chr5 168291765 168292141 -34793391 - Ricksha DNA DNA -1742 1504 1131 2125 138 7 0 chr5 168292141 168292445 -34793087 - AluSq SINE Alu -7 306 1 7158 178 43 38 chr5 168292445 168293330 -34792202 - Ricksha DNA DNA -2115 1131 1 2130 116 44 41 chr5 168293525 168293601 -34791931 - THE1B LTR MaLR 0 364 290 2057 115 18 0 chr5 168293601 168293887 -34791645 + AluSx SINE Alu 1 291 -21 2130 116 44 41 chr5 168293887 168294173 -34791359 - THE1B LTR MaLR -74 290 1 238 226 19 0 chr5 168294264 168294317 -34791215 - MIR SINE MIR -118 90 37 2373 165 46 18 chr5 168295020 168295474 -34790058 + MLT1C LTR MaLR 1 467 0 2530 206 43 0 chr5 168295589 168296078 -34789454 - MLT2B2 LTR ERVL -5 510 1 236 257 54 26 chr5 168296162 168296277 -34789255 + LTR33A LTR ERVL 431 521 -2 1695 109 0 144 chr5 168296399 168296746 -34788786 + AluSx SINE Alu 1 297 -5 291 209 36 79 chr5 168296761 168296900 -34788632 - HAL1b LINE L1 -7 1341 1209 256 341 76 0 chr5 168297651 168297862 -34787670 + L2 LINE L2 2856 3082 -231 196 338 54 0 chr5 168298373 168298447 -34787085 - L2 LINE L2 -63 3209 3132 188 293 68 60 chr5 168298525 168298658 -34786874 + MIR SINE MIR 59 192 -70 421 290 22 66 chr5 168299844 168300027 -34785505 + L3 LINE CR1 1312 1486 -91 1023 89 0 0 chr5 168300374 168300498 -34785034 + AluJb SINE Alu 1 124 -188 296 125 62 0 chr5 168300523 168300571 -34784961 + LTR50 LTR ERVL 745 795 0 330 304 6 22 chr5 168301994 168302175 -34783357 + (CA)n Simple_repeat Simple_repeat 1 178 0 417 294 5 33 chr5 168302217 168302401 -34783131 + (CA)n Simple_repeat Simple_repeat 2 180 0 2718 101 41 10 chr5 168303131 168303546 -34781986 + MSTA LTR MaLR 1 428 0 828 266 148 46 chr5 168303615 168303660 -34781872 - MLT1H1 LTR MaLR -15 540 501 1814 155 19 0 chr5 168303660 168303931 -34781601 - AluJo SINE Alu -12 300 25 828 266 148 46 chr5 168303931 168303973 -34781559 - MLT1H1 LTR MaLR -54 501 465 3290 107 12 12 chr5 168303973 168304486 -34781046 - LTR10D LTR ERV1 0 513 1 828 266 148 46 chr5 168304486 168304851 -34780681 - MLT1H1 LTR MaLR -90 465 41 2033 148 23 3 chr5 168304996 168305300 -34780232 - AluSx SINE Alu -2 310 1 1023 246 68 89 chr5 168305388 168305467 -34780065 - MLT1K LTR MaLR -3 473 394 2446 88 3 0 chr5 168305467 168305773 -34779759 + AluSp SINE Alu 1 307 -6 1023 246 68 89 chr5 168305773 168306176 -34779356 - MLT1K LTR MaLR -82 394 1 946 200 93 133 chr5 168306824 168307350 -34778182 + MLT1J LTR MaLR 4 508 -3 268 301 68 92 chr5 168307415 168307578 -34777954 - L3 LINE CR1 -54 1523 1365 228 111 0 0 chr5 168307963 168307999 -34777533 + (TAA)n Simple_repeat Simple_repeat 2 37 0 228 318 23 11 chr5 168308276 168308364 -34777168 - MIR SINE MIR -111 151 63 295 323 61 43 chr5 168308425 168308704 -34776828 + L2 LINE L2 2950 3233 -39 266 307 35 9 chr5 168308807 168308921 -34776611 - MIR3 SINE MIR -30 178 62 424 299 15 15 chr5 168309502 168309639 -34775893 - MIR3 SINE MIR -32 176 40 251 282 12 12 chr5 168309712 168309797 -34775735 + L2 LINE L2 2927 3011 -261 2308 100 7 0 chr5 168310007 168310298 -34775234 + AluSg1 SINE Alu 2 294 -15 396 192 0 0 chr5 168310450 168310523 -34775009 + MER117 DNA MER1_type 14 86 -111 690 243 7 0 chr5 168310547 168310695 -34774837 - FRAM SINE Alu -16 150 2 295 163 163 25 chr5 168311330 168311410 -34774122 + MIR SINE MIR 77 167 -95 763 164 88 12 chr5 168311435 168311605 -34773927 + MLT1C LTR MaLR 3 185 -282 828 167 0 14 chr5 168311605 168311743 -34773789 + AluJo SINE Alu 1 136 -176 900 196 58 97 chr5 168311748 168312059 -34773473 + MLT1C LTR MaLR 169 467 0 268 303 34 0 chr5 168312392 168312481 -34773051 + L2 LINE L2 3150 3241 -31 724 234 156 0 chr5 168312485 168312677 -34772855 - MIR SINE MIR -28 234 13 1553 186 10 7 chr5 168313057 168313353 -34772179 + AluJo SINE Alu 1 297 -15 2061 87 0 24 chr5 168313353 168313683 -34771849 + AluSc SINE Alu 1 323 0 2109 130 0 0 chr5 168313686 168313993 -34771539 + AluSx SINE Alu 3 309 -3 310 254 74 33 chr5 168314659 168314781 -34770751 - MER117 DNA MER1_type -48 149 23 724 233 0 58 chr5 168315206 168315378 -34770154 + FRAM SINE Alu 1 161 -15 607 170 25 13 chr5 168315400 168315559 -34769973 + GA-rich Low_complexity Low_complexity 2 162 0 1832 158 0 34 chr5 168315864 168316187 -34769345 - AluJb SINE Alu 0 312 1 2281 98 0 0 chr5 168316508 168316805 -34768727 - AluSg SINE Alu -13 297 1 738 191 0 8 chr5 168316916 168317042 -34768490 + FLAM_A SINE Alu 5 129 -4 244 306 157 9 chr5 168317151 168317259 -34768273 - MIR SINE MIR -63 145 22 2242 110 7 0 chr5 168317788 168318098 -34767434 + AluSx SINE Alu 1 312 0 2268 90 3 0 chr5 168318223 168318522 -34767010 + AluSx SINE Alu 1 300 -12 2307 79 0 0 chr5 168318994 168319285 -34766247 + AluSx SINE Alu 1 291 -21 643 176 26 20 chr5 168319285 168319312 -34766220 - L1MA4 LINE L1 -158 6142 6117 2184 84 3 20 chr5 168319312 168319611 -34765921 - AluSq SINE Alu -19 294 1 643 176 26 20 chr5 168319611 168319736 -34765796 - L1MA4 LINE L1 -183 6117 5989 502 192 29 10 chr5 168319894 168319998 -34765534 - MLT1I LTR MaLR 0 409 304 226 232 18 0 chr5 168320057 168320113 -34765419 + AluS SINE Alu 9 65 -238 2849 127 2 30 chr5 168320113 168320543 -34764989 - L1MA4 LINE L1 -330 5970 5554 2146 102 7 0 chr5 168320543 168320836 -34764696 + AluSx SINE Alu 1 295 -17 2849 127 2 30 chr5 168320836 168320901 -34764631 - L1MA4 LINE L1 -746 5554 5489 951 151 0 0 chr5 168320901 168321053 -34764479 - AluSg/x SINE Alu 0 310 159 410 92 0 15 chr5 168321446 168321511 -34764021 + (TCC)n Simple_repeat Simple_repeat 2 65 0 356 250 106 15 chr5 168322087 168322219 -34763313 + MIR3 SINE MIR 65 208 0 420 294 0 29 chr5 168322568 168322704 -34762828 + MIR3 SINE MIR 36 167 -41 563 278 70 5 chr5 168323279 168323466 -34762066 + MIR SINE MIR 10 208 -54 246 250 62 0 chr5 168323777 168323841 -34761691 + MER5A DNA MER1_type 116 183 -6 221 309 48 0 chr5 168323882 168323966 -34761566 - MIR SINE MIR -77 131 44 782 242 20 5 chr5 168324007 168324205 -34761327 - MIR SINE MIR 0 262 62 464 281 120 46 chr5 168324325 168324542 -34760990 - MIR SINE MIR -10 252 20 1668 169 17 7 chr5 168324813 168325109 -34760423 - AluJb SINE Alu -13 299 1 471 362 62 9 chr5 168325343 168325567 -34759965 - L1ME LINE L1 -453 5709 5474 211 298 0 0 chr5 168326064 168326121 -34759411 - MIR3 SINE MIR -34 174 118 866 245 8 51 chr5 168326227 168326480 -34759052 + MIR SINE MIR 7 248 -14 676 182 0 25 chr5 168326493 168326614 -34758918 + FLAM_C SINE Alu 1 118 -15 25 31 0 0 chr5 168326620 168326652 -34758880 + AT_rich Low_complexity Low_complexity 1 32 0 481 298 82 6 chr5 168326802 168326960 -34758572 - MIR SINE MIR -88 174 5 2173 109 0 3 chr5 168327413 168327715 -34757817 + AluSg SINE Alu 1 301 -9 256 302 51 38 chr5 168328146 168328338 -34757194 - L2 LINE L2 -283 2989 2798 227 224 17 0 chr5 168328817 168328875 -34756657 - Tigger5 DNA MER2_type -20 2303 2245 1891 119 0 57 chr5 168328881 168329199 -34756333 + AluSx SINE Alu 1 300 -12 291 194 164 0 chr5 168329199 168329266 -34756266 + Tigger5 DNA MER2_type 2246 2323 0 192 212 0 0 chr5 168329266 168329299 -34756233 + L3 LINE CR1 1429 1461 -116 456 230 18 9 chr5 168330285 168330398 -34755134 - MIR3 SINE MIR -3 205 92 266 234 39 26 chr5 168330637 168330714 -34754818 + MIR SINE MIR 16 93 -115 2072 100 10 3 chr5 168330776 168331066 -34754466 + AluSg SINE Alu 1 292 -18 289 244 139 17 chr5 168331329 168331444 -34754088 - MIR3 SINE MIR -76 132 4 207 226 11 129 chr5 168331533 168331583 -34753949 + MIR3 SINE MIR 99 137 -71 1956 95 33 0 chr5 168331583 168331888 -34753644 + AluSx SINE Alu 1 314 0 207 226 11 129 chr5 168331888 168331928 -34753604 + MIR3 SINE MIR 137 180 -28 359 280 17 40 chr5 168332286 168332461 -34753071 + CT-rich Low_complexity Low_complexity 1 171 0 380 298 113 7 chr5 168332754 168332905 -34752627 + MIR3 SINE MIR 36 202 -6 260 264 16 83 chr5 168333134 168333255 -34752277 - MIR3 SINE MIR -19 189 77 2071 123 0 7 chr5 168333423 168333724 -34751808 - AluSx SINE Alu -13 299 1 239 253 165 0 chr5 168334052 168334131 -34751401 + MIR SINE MIR 74 165 -97 1682 117 9 114 chr5 168334189 168334531 -34751001 + AluJo SINE Alu 1 306 -6 247 308 17 51 chr5 168334532 168334649 -34750883 + MIR SINE MIR 150 262 0 467 281 189 10 chr5 168335201 168335397 -34750135 - MIR SINE MIR -12 250 20 247 235 108 69 chr5 168335739 168335841 -34749691 + MIR SINE MIR 19 124 -84 291 234 234 7 chr5 168336996 168337133 -34748399 + MIR SINE MIR 80 247 -15 248 326 28 28 chr5 168337227 168337333 -34748199 - MIR SINE MIR -71 137 41 199 299 0 39 chr5 168338198 168338275 -34747257 - L2 LINE L2 -38 3234 3161 467 335 24 6 chr5 168338409 168338576 -34746956 + MIR SINE MIR 18 187 -75 329 330 37 0 chr5 168338584 168338693 -34746839 - MIR3 SINE MIR -54 154 42 714 253 185 8 chr5 168340411 168340763 -34744769 + MER113 DNA MER1_type? 4 417 -104 953 104 0 21 chr5 168341192 168341336 -34744196 - AluJb SINE Alu -171 141 1 2246 90 0 3 chr5 168341532 168341831 -34743701 - AluSx SINE Alu -14 298 1 871 131 15 0 chr5 168341832 168341962 -34743570 - AluJo/FLAM SINE Alu -169 133 2 2223 101 0 0 chr5 168342640 168342936 -34742596 + AluSx SINE Alu 1 296 -16 273 376 69 5 chr5 168343105 168343307 -34742225 - L2 LINE L2 -482 2832 2618 561 194 151 44 chr5 168343405 168343611 -34741921 + L1MB8 LINE L1 5902 6129 -49 185 86 57 0 chr5 168343640 168343675 -34741857 + A-rich Low_complexity Low_complexity 4 40 0 360 280 20 67 chr5 168344181 168344240 -34741292 - MER117 DNA MER1_type -26 171 111 2209 105 0 0 chr5 168344240 168344536 -34740996 - AluSx SINE Alu -16 296 1 360 280 20 67 chr5 168344536 168344626 -34740906 - MER117 DNA MER1_type -86 111 29 503 247 96 12 chr5 168344842 168345008 -34740524 - MIR SINE MIR -70 192 13 209 300 33 22 chr5 168345206 168345296 -34740236 - MIR SINE MIR -120 142 52 270 0 0 0 chr5 168346259 168346289 -34739243 + (CA)n Simple_repeat Simple_repeat 2 31 0 275 291 9 36 chr5 168346409 168346519 -34739013 - MIR SINE MIR -56 152 46 978 183 0 0 chr5 168346571 168346735 -34738797 + FAM SINE Alu 1 164 -11 2184 88 7 3 chr5 168346842 168347137 -34738395 + AluSq SINE Alu 1 296 -17 610 336 80 4 chr5 168347382 168347620 -34737912 - MIR SINE MIR -1 261 6 2030 113 65 57 chr5 168348309 168348681 -34736851 - THE1C LTR MaLR 0 375 1 185 222 0 0 chr5 168349178 168349223 -34736309 - L2 LINE L2 -49 3223 3179 1831 118 21 18 chr5 168349693 168349972 -34735560 - AluJb SINE Alu -22 290 11 1843 162 3 3 chr5 168350104 168350412 -34735120 + AluJb SINE Alu 1 308 -4 301 243 45 156 chr5 168350412 168350648 -34734884 - MIR SINE MIR -5 257 47 340 341 89 0 chr5 168351157 168351280 -34734252 - L2 LINE L2 -1 3271 3138 2341 90 0 3 chr5 168351607 168351918 -34733614 + AluSx SINE Alu 1 310 -2 302 264 64 0 chr5 168351933 168352058 -34733474 - L2 LINE L2 -421 2893 2761 1600 117 183 8 chr5 168352101 168352358 -34733174 + AluSx SINE Alu 1 302 0 1255 264 120 41 chr5 168352549 168352800 -34732732 - MLT1D LTR MaLR 0 505 275 1548 187 47 3 chr5 168352800 168353099 -34732433 - AluJo SINE Alu 0 312 1 1255 264 120 41 chr5 168353099 168353313 -34732219 - MLT1D LTR MaLR -230 275 3 221 333 36 12 chr5 168353774 168353858 -34731674 - L3 LINE CR1 -693 884 799 301 264 174 0 chr5 168353988 168354153 -34731379 - MIR SINE MIR -32 230 39 2048 129 0 0 chr5 168354328 168354614 -34730918 + AluSx SINE Alu 1 286 -26 201 39 0 0 chr5 168354614 168354640 -34730892 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 454 333 17 6 chr5 168354682 168354856 -34730676 + L1ME4a LINE L1 5943 6118 -3 486 284 19 26 chr5 168355132 168355287 -34730245 - MIR SINE MIR -63 199 46 2244 94 10 0 chr5 168355615 168355914 -34729618 + AluSq SINE Alu 1 302 -11 563 318 17 0 chr5 168355943 168356119 -34729413 + MIR SINE MIR 84 262 0 433 306 52 0 chr5 168356163 168356297 -34729235 - L2 LINE L2 -9 3263 3123 872 218 46 102 chr5 168357006 168357291 -34728241 + MER41B LTR ERV1 354 622 -13 2266 95 0 6 chr5 168357414 168357729 -34727803 - AluSq SINE Alu 0 313 1 1463 130 19 130 chr5 168357741 168357919 -34727613 - AluJb SINE Alu -26 286 158 2057 104 0 0 chr5 168357919 168358231 -34727301 - AluSx SINE Alu 0 312 18 1463 130 19 130 chr5 168358231 168358374 -34727158 - AluJb SINE Alu -154 158 1 867 255 123 4 chr5 168358396 168358639 -34726893 - L1ME3 LINE L1 -5 6157 5886 1000 192 22 115 chr5 168358641 168358816 -34726716 - AluYb8 SINE Alu -8 310 177 1878 105 7 65 chr5 168358816 168359122 -34726410 - AluSx SINE Alu -24 288 1 1000 192 22 115 chr5 168359122 168359269 -34726263 - AluYb8 SINE Alu -141 177 18 422 227 0 10 chr5 168359287 168359384 -34726148 - L1ME3 LINE L1 -271 5891 5796 1892 107 0 4 chr5 168359391 168359652 -34725880 - AluSx SINE Alu -11 301 42 464 325 41 10 chr5 168359845 168360039 -34725493 + MIR SINE MIR 9 208 -54 1129 141 11 16 chr5 168360051 168360236 -34725296 + AluJo SINE Alu 121 304 -8 2247 106 3 0 chr5 168360438 168360749 -34724783 - AluSp SINE Alu -1 312 1 457 241 102 44 chr5 168361602 168361691 -34723841 - MIR SINE MIR -1 261 160 2106 173 48 37 chr5 168361691 168361735 -34723797 + MLT1C LTR MaLR 1 43 -424 2271 98 0 3 chr5 168361735 168362042 -34723490 + AluSg1 SINE Alu 1 306 -3 2106 173 48 37 chr5 168362042 168362459 -34723073 + MLT1C LTR MaLR 43 467 0 457 241 102 44 chr5 168362459 168362506 -34723026 - MIR SINE MIR -102 160 117 540 185 0 0 chr5 168362613 168362705 -34722827 - FLAM_C SINE Alu -8 135 44 350 278 78 17 chr5 168363136 168363251 -34722281 + MIR SINE MIR 21 142 -120 958 150 34 0 chr5 168363279 168363426 -34722106 + AluJo SINE Alu 1 152 -160 1523 134 4 65 chr5 168363437 168363714 -34721818 + AluSx SINE Alu 29 288 -24 1757 178 0 3 chr5 168363727 168364024 -34721508 + AluJb SINE Alu 1 296 -16 2570 65 0 0 chr5 168364024 168364332 -34721200 + AluY SINE Alu 1 308 -3 3186 157 37 12 chr5 168364334 168365047 -34720485 + L1M1 LINE L1 4760 5494 -743 2000 124 43 3 chr5 168365047 168365346 -34720186 + AluSq SINE Alu 1 311 -2 2120 127 3 10 chr5 168365364 168365678 -34719854 + AluSx SINE Alu 1 312 0 2159 128 3 10 chr5 168366043 168366356 -34719176 - AluSx SINE Alu -1 311 1 421 271 203 32 chr5 168366526 168367115 -34718417 - L2 LINE L2 0 3313 2622 2020 112 3 43 chr5 168367805 168368127 -34717405 - AluSx SINE Alu -3 309 1 2388 102 0 6 chr5 168368406 168368721 -34716811 + AluSq SINE Alu 1 313 0 2277 90 20 0 chr5 168368739 168369040 -34716492 + AluSg SINE Alu 1 307 -3 322 73 0 0 chr5 168369045 168369086 -34716446 + 5S rRNA rRNA 2 42 -79 2573 55 3 0 chr5 168369421 168369731 -34715801 + AluY SINE Alu 1 311 0 2161 130 0 10 chr5 168370451 168370759 -34714773 - AluSx SINE Alu -7 305 1 2069 128 0 0 chr5 168370786 168371074 -34714458 + AluSx SINE Alu 1 288 -24 194 62 31 0 chr5 168371722 168371754 -34713778 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2070 155 0 0 chr5 168372024 168372328 -34713204 + AluJb SINE Alu 1 304 -8 1710 168 9 47 chr5 168372402 168372543 -34712989 + AluJo SINE Alu 1 146 -166 2105 111 0 0 chr5 168372543 168372852 -34712680 + AluSc SINE Alu 1 309 0 2220 115 0 10 chr5 168372855 168373159 -34712373 + AluSx SINE Alu 1 301 -11 1710 168 9 47 chr5 168373159 168373334 -34712198 + AluJo SINE Alu 148 310 -2 994 207 9 24 chr5 168373340 168373553 -34711979 - MSTD LTR MaLR 0 396 187 2322 90 0 0 chr5 168373587 168373877 -34711655 + AluSg1 SINE Alu 1 290 -19 639 144 0 48 chr5 168373877 168373981 -34711551 - AluJb SINE Alu -30 282 184 932 154 16 85 chr5 168373981 168374087 -34711445 - MSTD LTR MaLR -221 175 86 1617 188 0 33 chr5 168374087 168374391 -34711141 - AluJb SINE Alu -18 294 1 932 154 16 85 chr5 168374391 168374472 -34711060 - MSTD LTR MaLR -310 86 1 1874 237 106 9 chr5 168374518 168375159 -34710373 + Charlie2 DNA MER1_type 1933 2635 -227 2070 140 3 3 chr5 168375240 168375548 -34709984 + AluSx SINE Alu 1 308 -4 1673 162 37 0 chr5 168375557 168375867 -34709665 + AluJb SINE Alu 1 320 0 2129 63 50 40 chr5 168376033 168376333 -34709199 + AluY SINE Alu 2 304 -7 1261 119 0 11 chr5 168376341 168376526 -34709006 + AluSg/x SINE Alu 126 308 -2 364 195 37 12 chr5 168376527 168376609 -34708923 + Charlie2 DNA MER1_type 2773 2856 -6 1524 135 3 87 chr5 168376792 168377104 -34708428 + AluJo SINE Alu 5 290 -22 202 213 49 33 chr5 168377115 168377176 -34708356 + MIR SINE MIR 71 132 -76 200 310 173 63 chr5 168377520 168377914 -34707618 - L2 LINE L2 -12 3260 2824 2226 111 3 0 chr5 168378051 168378348 -34707184 + AluSx SINE Alu 1 298 -14 2066 102 0 14 chr5 168378813 168379117 -34706415 + AluSq SINE Alu 5 304 0 867 171 206 86 chr5 168379162 168379419 -34706113 + AluJo SINE Alu 1 288 -14 1114 163 0 17 chr5 168379497 168379675 -34705857 + FAM SINE Alu 1 47 -2 2247 100 3 0 chr5 168379675 168379966 -34705566 + AluSp SINE Alu 1 292 -21 1992 99 7 4 chr5 168380121 168380393 -34705139 + AluSg SINE Alu 1 273 -37 1791 125 26 30 chr5 168380798 168381103 -34704429 - AluSx SINE Alu -8 304 1 186 233 206 14 chr5 168381110 168381183 -34704349 + L3 LINE CR1 913 999 -578 1866 170 0 3 chr5 168381303 168381592 -34703940 - AluJb SINE Alu -24 288 1 238 284 49 49 chr5 168381980 168382082 -34703450 + MLT1J2 LTR MaLR 67 168 -282 379 216 251 0 chr5 168382631 168382759 -34702773 + MER63 DNA MER1_type 675 1688 0 189 259 103 0 chr5 168382829 168382887 -34702645 - MIR SINE MIR -112 150 87 846 183 30 94 chr5 168382933 168383135 -34702397 - MER5A DNA MER1_type 0 189 1 230 159 23 0 chr5 168383179 168383223 -34702309 + MIR SINE MIR 50 94 -114 1862 131 30 20 chr5 168383589 168383886 -34701646 + AluJo SINE Alu 1 300 -12 1666 115 123 7 chr5 168384099 168384368 -34701164 + AluSx SINE Alu 1 300 -12 2241 77 10 13 chr5 168384827 168385125 -34700407 - AluSp SINE Alu -16 297 1 232 128 0 0 chr5 168385233 168385272 -34700260 + L2 LINE L2 3194 3232 -40 225 0 0 0 chr5 168386143 168386168 -34699364 + (T)n Simple_repeat Simple_repeat 1 25 0 1751 91 50 70 chr5 168386668 168386815 -34698717 - AluSx SINE Alu -20 292 153 189 0 0 0 chr5 168386815 168386836 -34698696 + (TG)n Simple_repeat Simple_repeat 2 22 0 1751 91 50 70 chr5 168386836 168386986 -34698546 - AluSx SINE Alu -159 153 1 2183 117 13 0 chr5 168387701 168388000 -34697532 - AluSx SINE Alu -9 303 1 373 89 0 0 chr5 168388263 168388319 -34697213 + Alu SINE Alu 246 301 -1 399 248 142 0 chr5 168388348 168388461 -34697071 + MIR SINE MIR 111 239 -23 792 195 128 67 chr5 168388696 168388918 -34696614 - L1MC4 LINE L1 -863 7179 6931 2013 110 46 0 chr5 168388918 168389199 -34696333 - AluSg SINE Alu -16 294 1 792 195 128 67 chr5 168389199 168389289 -34696243 - L1MC4 LINE L1 -1111 6931 6848 222 37 0 0 chr5 168391588 168391615 -34693917 + (A)n Simple_repeat Simple_repeat 1 27 0 2134 120 7 7 chr5 168393636 168393945 -34691587 - AluSg SINE Alu -1 309 1 721 214 8 8 chr5 168395257 168395388 -34690144 + FLAM_C SINE Alu 3 133 0 591 109 0 69 chr5 168395395 168395496 -34690036 - FLAM_C SINE Alu -15 128 35 2412 88 0 28 chr5 168395729 168395908 -34689624 - AluY SINE Alu 0 311 143 2606 47 0 0 chr5 168395908 168396208 -34689324 - AluY SINE Alu -11 300 1 2412 88 0 28 chr5 168396208 168396348 -34689184 - AluY SINE Alu -168 143 1 612 191 26 9 chr5 168396382 168396497 -34689035 - FLAM_C SINE Alu -15 118 2 1389 158 16 118 chr5 168398124 168398446 -34687086 - AluJo SINE Alu -13 289 1 2194 119 10 0 chr5 168398542 168398837 -34686695 - AluSx SINE Alu -14 298 1 180 276 190 0 chr5 168398937 168398995 -34686537 - MER5A DNA MER1_type 0 189 121 22 35 0 0 chr5 168400118 168400147 -34685385 + AT_rich Low_complexity Low_complexity 1 29 0 258 160 0 0 chr5 168400976 168401026 -34684506 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 2253 110 0 0 chr5 168401691 168401991 -34683541 - AluSq SINE Alu -12 301 2 2069 125 7 0 chr5 168402003 168402300 -34683232 - AluSx SINE Alu -11 301 3 1792 149 0 39 chr5 168403230 168403538 -34681994 - AluJb SINE Alu -16 296 1 394 253 118 18 chr5 168403547 168403717 -34681815 - L1ME LINE L1 -302 5819 5633 1625 150 39 26 chr5 168404679 168404986 -34680546 - AluJb SINE Alu 0 312 2 1666 138 0 87 chr5 168405157 168405469 -34680063 - AluJb SINE Alu -27 285 1 833 119 8 0 chr5 168405488 168405606 -34679926 - AluJb SINE Alu -193 119 1 925 228 0 6 chr5 168406032 168406199 -34679333 - FAM SINE Alu -9 166 1 1686 169 10 17 chr5 168406208 168406545 -34678987 - AluJo SINE Alu 0 312 1 1511 161 46 19 chr5 168406817 168407077 -34678455 + AluJb SINE Alu 9 275 -37 218 204 0 0 chr5 168407456 168407500 -34678032 - L3 LINE CR1 -11 1566 1523 231 173 0 0 chr5 168408041 168408093 -34677439 + (TA)n Simple_repeat Simple_repeat 2 53 0 2164 114 3 3 chr5 168409376 168409674 -34675858 + AluSx SINE Alu 1 298 -14 2109 121 9 40 chr5 168411788 168412110 -34673422 + AluSx SINE Alu 1 312 0 207 182 0 0 chr5 168413453 168413497 -34672035 + A-rich Low_complexity Low_complexity 2 45 0 452 248 128 47 chr5 168415859 168416117 -34669415 - L1ME4a LINE L1 -294 5827 5549 1651 166 9 56 chr5 168416127 168416446 -34669086 - AluJo SINE Alu -8 304 1 1983 110 34 14 chr5 168416475 168416767 -34668765 - AluSq SINE Alu -15 298 1 23 0 0 0 chr5 168416905 168416928 -34668604 + AT_rich Low_complexity Low_complexity 1 23 0 1863 159 0 10 chr5 168416969 168417270 -34668262 - AluJb SINE Alu -14 298 1 256 328 86 47 chr5 168417689 168417817 -34667715 + L2 LINE L2 3137 3269 -3 2133 115 3 3 chr5 168417905 168418200 -34667332 - AluSx SINE Alu -17 295 1 816 170 7 41 chr5 168418225 168418372 -34667160 - FRAM SINE Alu -30 146 5 1695 125 32 4 chr5 168418523 168418804 -34666728 - L1MA4 LINE L1 -5 6295 6007 264 59 0 0 chr5 168420957 168420991 -34664541 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1371 146 20 106 chr5 168420993 168421295 -34664237 - AluJo SINE Alu -31 281 6 2090 105 7 7 chr5 168421965 168422260 -34663272 - AluSx SINE Alu -17 295 1 22 56 0 0 chr5 168424780 168424816 -34660716 + AT_rich Low_complexity Low_complexity 1 36 0 266 309 173 18 chr5 168424950 168425060 -34660472 + L2 LINE L2 3141 3267 -5 2310 105 0 16 chr5 168425519 168425834 -34659698 + AluSg SINE Alu 1 310 0 756 121 67 191 chr5 168425971 168426086 -34659446 - Charlie4a DNA MER1_type -1506 455 327 2085 105 58 0 chr5 168426086 168426381 -34659151 + AluSp SINE Alu 1 312 -1 756 121 67 191 chr5 168426381 168426399 -34659133 - Charlie4a DNA MER1_type -1634 327 308 1487 116 119 81 chr5 168426399 168426684 -34658848 + AluSx SINE Alu 1 296 -16 756 121 67 191 chr5 168426684 168426729 -34658803 - Charlie4a DNA MER1_type -1653 308 259 1841 159 18 0 chr5 168426729 168427012 -34658520 - AluSx SINE Alu -24 288 1 756 121 67 191 chr5 168427012 168427145 -34658387 - Charlie4a DNA MER1_type -1702 259 181 435 179 0 0 chr5 168427165 168427232 -34658300 + AluS SINE Alu 226 292 -17 1899 137 18 0 chr5 168427244 168427521 -34658011 + AluSq SINE Alu 1 282 -31 681 248 10 40 chr5 168427530 168427732 -34657800 - Charlie4a DNA MER1_type -312 196 1 193 325 122 59 chr5 168428058 168428295 -34657237 - L2 LINE L2 -68 3204 2953 871 195 98 5 chr5 168428719 168428934 -34656598 + L1MB7 LINE L1 5938 6172 -12 2540 58 0 13 chr5 168429032 168429344 -34656188 + AluSc SINE Alu 1 308 -1 217 274 48 0 chr5 168429387 168429449 -34656083 + L2 LINE L2 2605 2669 -645 1427 142 116 19 chr5 168429489 168429757 -34655775 + AluJb SINE Alu 9 302 -10 1983 147 6 19 chr5 168430462 168430776 -34654756 - AluSx SINE Alu -2 310 1 2228 114 3 0 chr5 168430786 168431083 -34654449 - AluSp SINE Alu -15 298 1 308 273 134 41 chr5 168431667 168431861 -34653671 + MIR SINE MIR 1 212 -50 2329 109 0 0 chr5 168431924 168432227 -34653305 + AluSx SINE Alu 1 303 -9 293 306 8 48 chr5 168432448 168432572 -34652960 + MER5A DNA MER1_type 71 189 0 208 252 92 84 chr5 168432796 168432845 -34652687 + L2 LINE L2 3193 3240 -73 2642 42 3 0 chr5 168432845 168433152 -34652380 - AluSp SINE Alu -5 308 1 208 252 92 84 chr5 168433152 168433221 -34652311 + L2 LINE L2 3240 3312 -1 2368 101 3 0 chr5 168433471 168433779 -34651753 + AluSp SINE Alu 1 309 -4 1218 187 0 22 chr5 168434097 168434322 -34651210 + AluJo SINE Alu 86 305 -7 24 53 0 0 chr5 168434388 168434426 -34651106 + AT_rich Low_complexity Low_complexity 1 38 0 603 272 19 6 chr5 168434450 168434608 -34650924 + MER5B DNA MER1_type 19 178 0 213 265 245 0 chr5 168434643 168434741 -34650791 + MIR SINE MIR 71 192 -70 26 0 0 0 chr5 168435474 168435500 -34650032 + AT_rich Low_complexity Low_complexity 1 26 0 227 286 0 0 chr5 168435563 168435626 -34649906 + L1ME1 LINE L1 6043 6105 -61 2072 121 3 16 chr5 168435627 168435933 -34649599 + AluSg SINE Alu 1 302 -8 2233 109 0 16 chr5 168435983 168436287 -34649245 - AluSx SINE Alu -13 299 1 2289 113 17 0 chr5 168436523 168436825 -34648707 + AluSx SINE Alu 1 307 -5 3124 94 7 42 chr5 168436896 168437352 -34648180 + MER1A DNA MER1_type 90 529 0 867 20 0 0 chr5 168437422 168437523 -34648009 + (TA)n Simple_repeat Simple_repeat 1 101 0 2388 93 3 0 chr5 168437523 168437824 -34647708 - AluSx SINE Alu -10 302 1 894 224 6 12 chr5 168438571 168438741 -34646791 + FAM SINE Alu 1 169 -6 803 173 0 30 chr5 168439216 168439349 -34646183 + AluJo SINE Alu 7 135 -177 660 206 64 21 chr5 168439426 168439567 -34645965 + Tigger2a DNA MER2_type 1 147 -287 252 0 0 0 chr5 168439567 168439595 -34645937 + (TA)n Simple_repeat Simple_repeat 1 28 0 673 138 0 161 chr5 168439598 168439683 -34645849 + Tigger2a DNA MER2_type 289 334 -2374 1744 110 126 8 chr5 168439683 168439946 -34645586 + AluSg1 SINE Alu 1 294 -15 673 138 0 161 chr5 168439946 168440034 -34645498 + Tigger2a DNA MER2_type 334 434 0 2045 91 3 46 chr5 168440724 168441031 -34644501 - AluSx SINE Alu -18 294 1 2217 116 0 0 chr5 168441182 168441474 -34644058 + AluSc SINE Alu 1 292 -17 781 148 59 0 chr5 168442347 168442482 -34643050 + L1ME1 LINE L1 5840 5982 -184 2275 102 3 10 chr5 168442686 168443000 -34642532 - AluSx SINE Alu 0 312 1 2082 136 0 0 chr5 168443114 168443409 -34642123 + AluSx SINE Alu 1 295 -17 2098 75 43 18 chr5 168443409 168443690 -34641842 + AluSq SINE Alu 1 289 -24 240 35 0 0 chr5 168447048 168447077 -34638455 + (A)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr5 168447355 168447377 -34638155 + AT_rich Low_complexity Low_complexity 1 22 0 2113 92 32 0 chr5 168447385 168447668 -34637864 + AluSx SINE Alu 1 292 -20 2072 93 4 7 chr5 168447945 168448223 -34637309 + AluSx SINE Alu 1 277 -35 2244 104 0 0 chr5 168448717 168449006 -34636526 + AluSx SINE Alu 3 291 -21 863 218 0 0 chr5 168449012 168449159 -34636373 + FRAM SINE Alu 1 146 -30 240 35 0 0 chr5 168449159 168449188 -34636344 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 264 264 0 0 chr5 168449255 168449308 -34636224 + L3 LINE CR1 1524 1576 -1 2421 78 3 3 chr5 168449680 168449989 -34635543 + AluSg SINE Alu 1 309 -1 1590 180 0 37 chr5 168450150 168450444 -34635088 - AluJo SINE Alu -29 283 1 269 273 15 0 chr5 168450480 168450546 -34634986 - MIR SINE MIR -90 118 52 800 142 33 0 chr5 168450671 168450791 -34634741 + FLAM_C SINE Alu 1 124 -19 2127 120 0 13 chr5 168451016 168451190 -34634342 - AluSx SINE Alu -5 307 137 2121 121 3 7 chr5 168451190 168451516 -34634016 - AluSq SINE Alu 0 313 1 2127 120 0 13 chr5 168451516 168451642 -34633890 - AluSx SINE Alu -175 137 11 1938 176 106 0 chr5 168451891 168452288 -34633244 - LTR47A LTR ERVL 0 452 14 276 100 0 0 chr5 168452288 168452328 -34633204 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 866 182 7 0 chr5 168452329 168452472 -34633060 - FRAM SINE Alu -32 144 1 2153 105 13 33 chr5 168452695 168453001 -34632531 - AluSx SINE Alu -12 300 1 2255 97 0 22 chr5 168453054 168453365 -34632167 + AluSg SINE Alu 1 304 -6 806 134 0 8 chr5 168453366 168453485 -34632047 - AluJb SINE Alu -194 118 1 423 0 0 0 chr5 168453521 168453568 -34631964 + (TG)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 168453568 168453598 -34631934 + AT_rich Low_complexity Low_complexity 1 30 0 287 175 189 42 chr5 168453612 168453755 -34631777 - L1ME4a LINE L1 -23 6098 5935 343 185 0 0 chr5 168453770 168453824 -34631708 + Alu SINE Alu 235 288 -14 2182 108 0 0 chr5 168453872 168454151 -34631381 + AluSg SINE Alu 1 279 -31 472 291 58 33 chr5 168454179 168454454 -34631078 - L1ME4a LINE L1 -207 5914 5633 509 295 50 36 chr5 168454834 168455112 -34630420 - L1ME4a LINE L1 -207 5914 5633 2194 102 7 0 chr5 168455586 168455900 -34629632 - AluSp SINE Alu 0 316 1 788 153 15 36 chr5 168456128 168456265 -34629267 + AluJb SINE Alu 2 135 -177 2436 83 0 0 chr5 168456479 168456779 -34628753 + AluSg SINE Alu 1 300 -10 2363 50 20 13 chr5 168457911 168458231 -34627301 - AluY SINE Alu 0 311 1 1779 143 7 18 chr5 168459430 168459709 -34625823 - AluSx SINE Alu -4 308 33 199 363 26 18 chr5 168459741 168459928 -34625604 - MIR SINE MIR -54 208 20 2315 76 10 0 chr5 168460027 168460318 -34625214 + AluSp SINE Alu 1 294 -19 322 278 108 72 chr5 168460697 168460891 -34624641 + L2 LINE L2 3070 3270 -2 377 304 29 0 chr5 168461103 168461205 -34624327 - L2 LINE L2 -18 3295 3191 2134 123 13 0 chr5 168461320 168461629 -34623903 - AluSq SINE Alu 0 313 1 2137 102 7 3 chr5 168461698 168461981 -34623551 + AluSx SINE Alu 1 284 -28 207 0 0 0 chr5 168462014 168462037 -34623495 + (CAA)n Simple_repeat Simple_repeat 2 24 0 351 245 7 47 chr5 168462072 168462207 -34623325 - MIR SINE MIR -71 137 27 2142 223 84 32 chr5 168462381 168463593 -34621939 - L1MC4 LINE L1 -195 7847 6453 1310 156 0 28 chr5 168463593 168463805 -34621727 - AluJb SINE Alu -106 206 1 348 267 48 0 chr5 168463809 168463914 -34621618 - L1MC4a LINE L1 -1353 6455 6346 * 2123 211 14 85 chr5 168463912 168464025 -34621507 - L1ME2 LINE L1 -10 6154 6035 1940 119 66 7 chr5 168464025 168464311 -34621221 + AluSx SINE Alu 1 303 -9 2123 211 14 85 chr5 168464311 168464779 -34620753 - L1ME2 LINE L1 -129 6035 5535 243 0 0 0 chr5 168464779 168464806 -34620726 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2077 121 0 7 chr5 168464809 168465098 -34620434 - AluSx SINE Alu -25 287 1 2124 111 0 13 chr5 168465101 168465399 -34620133 - AluSx SINE Alu -18 294 1 2123 211 14 85 chr5 168465399 168465452 -34620080 - L1ME2 LINE L1 -552 5612 5557 752 250 15 5 chr5 168465571 168465767 -34619765 + L1M4 LINE L1 4173 4370 -1776 2323 84 3 10 chr5 168465783 168466081 -34619451 + AluSq SINE Alu 3 298 -15 2198 86 4 4 chr5 168466085 168466364 -34619168 + AluSg SINE Alu 1 279 -31 2300 101 7 3 chr5 168466533 168466839 -34618693 - AluSq SINE Alu -6 307 1 237 65 0 0 chr5 168466841 168466872 -34618660 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 910 122 0 0 chr5 168466872 168466995 -34618537 - AluSg/x SINE Alu -31 279 157 2091 212 11 42 chr5 168466998 168467236 -34618296 + L1M4 LINE L1 4401 4645 -1501 1817 152 55 0 chr5 168467236 168467526 -34618006 + AluJo SINE Alu 1 306 -6 2091 212 11 42 chr5 168467526 168467854 -34617678 + L1M4 LINE L1 4645 4949 -1197 1745 139 34 7 chr5 168467860 168468154 -34617378 + ERVL-D LTR ERVL 5456 5757 -7 2114 165 38 48 chr5 168468154 168468466 -34617066 + MLT2D LTR ERVL 1 310 -104 2739 171 13 0 chr5 168468466 168468917 -34616615 - MSTB2 LTR MaLR 0 457 1 2114 165 38 48 chr5 168468917 168469022 -34616510 + MLT2D LTR ERVL 310 414 0 716 237 92 66 chr5 168469023 168469327 -34616205 + L2 LINE L2 2996 3307 -6 432 266 72 72 chr5 168469384 168469662 -34615870 - L1ME4a LINE L1 -227 5894 5617 427 323 162 23 chr5 168470023 168470843 -34614689 + L2 LINE L2 2040 2973 -341 504 222 84 38 chr5 168470939 168471226 -34614306 + MLT1L LTR MaLR 1 342 -273 1152 89 0 0 chr5 168471268 168471414 -34614118 - AluSg/x SINE Alu -2 308 163 492 124 0 95 chr5 168471416 168471521 -34614011 + AluJb SINE Alu 59 153 -159 2045 144 3 0 chr5 168471560 168471866 -34613666 + AluSx SINE Alu 1 307 -5 361 353 29 0 chr5 168471910 168472049 -34613483 + MIR SINE MIR 27 169 -93 2181 106 3 7 chr5 168472271 168472564 -34612968 + AluSx SINE Alu 1 292 -20 555 246 160 0 chr5 168472697 168472872 -34612660 + MIR SINE MIR 47 249 -13 481 269 0 8 chr5 168473736 168473855 -34611677 + LTR67 LTR ERVL 438 555 -2 265 299 0 35 chr5 168474103 168474190 -34611342 - L2 LINE L2 0 3272 3189 243 296 144 32 chr5 168474898 168475023 -34610509 + MIR3 SINE MIR 21 159 -49 * 524 294 107 72 chr5 168475014 168475169 -34610363 - L3 LINE CR1 -2 1575 1427 2142 111 0 10 chr5 168475169 168475480 -34610052 - AluSx SINE Alu 0 308 1 524 294 107 72 chr5 168475480 168475648 -34609884 - L3 LINE CR1 -150 1427 1232 2322 98 0 7 chr5 168475648 168475955 -34609577 - AluSc SINE Alu -3 306 2 524 294 107 72 chr5 168475955 168476020 -34609512 - L3 LINE CR1 -345 1232 1171 782 241 30 30 chr5 168476061 168476297 -34609235 + MIR SINE MIR 3 238 -24 296 275 12 0 chr5 168476508 168476588 -34608944 + L2 LINE L2 3201 3281 -32 231 208 19 0 chr5 168477410 168477463 -34608069 - MIR3 SINE MIR -47 161 108 275 276 0 0 chr5 168477670 168477746 -34607786 - MIR SINE MIR -97 111 36 276 243 142 53 chr5 168478017 168478186 -34607346 + MIR SINE MIR 77 260 -2 941 152 76 0 chr5 168478186 168478370 -34607162 + L1MA4 LINE L1 6087 6284 -16 33 0 0 0 chr5 168478375 168478408 -34607124 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 168478484 168478513 -34607019 + AT_rich Low_complexity Low_complexity 1 29 0 2095 120 13 3 chr5 168478730 168479031 -34606501 - AluSx SINE Alu -8 304 1 1937 153 10 0 chr5 168479352 168479653 -34605879 - AluJb SINE Alu -6 306 3 2295 108 0 37 chr5 168480192 168480516 -34605016 - AluSx SINE Alu 0 312 1 1475 215 39 36 chr5 168480598 168481114 -34604418 + L1ME2 LINE L1 5344 5909 -255 2263 104 0 3 chr5 168481114 168481413 -34604119 - AluSx SINE Alu -14 298 1 1475 215 39 36 chr5 168481413 168481439 -34604093 + L1ME2 LINE L1 5909 5933 -231 305 286 48 36 chr5 168481592 168481760 -34603772 - L2 LINE L2 0 3313 3144 2096 118 20 13 chr5 168481851 168482157 -34603375 - AluSx SINE Alu -4 308 1 2052 116 23 13 chr5 168482419 168482722 -34602810 - AluSx SINE Alu -6 306 1 256 274 0 0 chr5 168482767 168482829 -34602703 - L2 LINE L2 -679 2635 2574 377 300 44 82 chr5 168482894 168483187 -34602345 - L3 LINE CR1 -1007 570 289 368 229 117 88 chr5 168483190 168483395 -34602137 - MLT1K LTR MaLR -11 577 367 318 276 18 21 chr5 168483562 168483741 -34601791 - MIR SINE MIR -17 245 16 2402 83 0 7 chr5 168484050 168484352 -34601180 - AluSg SINE Alu -10 300 1 294 29 0 0 chr5 168484354 168484389 -34601143 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1785 135 4 8 chr5 168484493 168484753 -34600779 - AluSx SINE Alu -53 259 1 29 0 0 0 chr5 168484914 168484943 -34600589 + AT_rich Low_complexity Low_complexity 1 29 0 1324 169 146 11 chr5 168485103 168485363 -34600169 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr5 168485475 168485496 -34600036 + AT_rich Low_complexity Low_complexity 1 21 0 1656 172 3 56 chr5 168485496 168485650 -34599882 - AluJb SINE Alu -25 287 155 2230 89 0 59 chr5 168485650 168485974 -34599558 - AluSq SINE Alu -8 305 1 1656 172 3 56 chr5 168485974 168486122 -34599410 - AluJb SINE Alu -157 155 1 258 284 30 0 chr5 168486238 168486305 -34599227 + L2 LINE L2 3242 3310 -3 2366 101 0 0 chr5 168486438 168486735 -34598797 - AluSg SINE Alu -13 297 1 1619 149 10 40 chr5 168486741 168487037 -34598495 - AluJb SINE Alu -8 304 18 545 219 258 0 chr5 168487037 168487215 -34598317 + L1MD2 LINE L1 6069 6292 -67 973 191 41 107 chr5 168487219 168487538 -34597994 - AluJo SINE Alu -4 298 1 897 168 6 19 chr5 168487542 168487703 -34597829 - FRAM SINE Alu -7 159 1 2161 149 3 14 chr5 168487771 168488140 -34597392 + MER47A DNA MER2_type 2 366 0 3243 176 97 62 chr5 168488160 168488916 -34596616 - L1MD2 LINE L1 -16 6343 5554 2260 133 0 0 chr5 168488916 168489225 -34596307 - AluSx SINE Alu -1 311 3 3243 176 97 62 chr5 168489225 168489295 -34596237 - L1MD2 LINE L1 -805 5554 5488 1703 177 26 36 chr5 168489305 168489658 -34595874 - L1MB8 LINE L1 0 6178 5828 2810 132 24 2 chr5 168489658 168490083 -34595449 - Tigger2a DNA MER2_type 0 434 1 1703 177 26 36 chr5 168490083 168490113 -34595419 - L1MB8 LINE L1 -350 5828 5799 445 92 132 0 chr5 168490163 168490239 -34595293 - L1MA4 LINE L1 -11 6289 6204 1293 150 77 22 chr5 168491030 168491304 -34594228 + L1MD1 LINE L1 5802 6090 -152 1816 159 13 36 chr5 168491304 168491637 -34593895 - AluJo SINE Alu 0 312 1 1350 265 129 50 chr5 168491718 168492457 -34593075 - L1MEd LINE L1 -5307 812 16 2163 89 14 0 chr5 168492475 168492755 -34592777 - AluSx SINE Alu -26 286 3 2182 92 7 4 chr5 168493421 168493702 -34591830 - AluSx SINE Alu -22 290 9 1235 104 0 15 chr5 168494415 168494676 -34590856 + (TTC)n Simple_repeat Simple_repeat 1 257 0 393 223 0 21 chr5 168494906 168495000 -34590532 + L1MC4 LINE L1 6614 6705 -1337 207 0 0 0 chr5 168495587 168495610 -34589922 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 597 169 0 105 chr5 168495613 168495737 -34589795 - FLAM_A SINE Alu -27 115 5 1902 183 45 0 chr5 168496092 168496425 -34589107 - MER7A DNA MER2_type 0 346 1 2338 86 3 0 chr5 168496797 168497089 -34588443 - AluSg1 SINE Alu -16 293 1 318 371 46 0 chr5 168497516 168497667 -34587865 - MIR3 SINE MIR -9 199 42 1086 280 96 21 chr5 168497671 168498197 -34587335 - L2 LINE L2 0 3313 2702 2352 110 0 0 chr5 168498197 168498507 -34587025 - AluSg SINE Alu 0 310 1 1086 280 96 21 chr5 168498507 168498630 -34586902 - L2 LINE L2 -611 2702 2590 842 136 8 0 chr5 168498645 168498770 -34586762 - AluJb SINE Alu -17 295 170 2487 78 0 0 chr5 168499089 168499385 -34586147 - AluSx SINE Alu -16 296 1 857 211 97 4 chr5 168499404 168499641 -34585891 - MIR SINE MIR -2 260 2 2153 132 0 0 chr5 168499806 168500102 -34585430 + AluSx SINE Alu 1 296 -16 1005 118 0 0 chr5 168500421 168500574 -34584958 + MER53 DNA DNA 23 175 -14 1836 101 0 0 chr5 168500829 168501067 -34584465 - AluSg/x SINE Alu -6 304 67 2380 112 0 0 chr5 168501097 168501409 -34584123 + AluSx SINE Alu 1 312 0 1230 171 71 7 chr5 168501409 168501689 -34583843 - MER33 DNA MER1_type -18 306 9 520 272 38 9 chr5 168501816 168502029 -34583503 - MIR SINE MIR -29 233 15 338 140 18 0 chr5 168502731 168502788 -34582744 - L1MC4a LINE L1 -1756 6052 5995 559 192 29 10 chr5 168502789 168502893 -34582639 - U6 snRNA snRNA -1 106 1 451 191 59 168 chr5 168502893 168503081 -34582451 + L2 LINE L2 2687 2894 -419 1843 117 62 7 chr5 168503081 168503354 -34582178 - AluSx SINE Alu -24 288 1 451 191 59 168 chr5 168503354 168503657 -34581875 + L2 LINE L2 2894 3138 -175 1273 180 105 80 chr5 168503666 168503904 -34581628 - LTR7 LTR ERV1 0 450 195 2392 84 0 19 chr5 168503904 168504215 -34581317 - AluY SINE Alu -6 305 1 1273 180 105 80 chr5 168504215 168504415 -34581117 - LTR7 LTR ERV1 -255 195 1 2165 106 3 7 chr5 168504490 168504782 -34580750 - AluSg SINE Alu -18 292 2 289 285 89 29 chr5 168504783 168504921 -34580611 - MIR SINE MIR -65 143 18 2161 118 3 3 chr5 168505016 168505322 -34580210 + AluSx SINE Alu 1 306 -6 1348 278 41 8 chr5 168505930 168506318 -34579214 - MLT1I LTR MaLR 0 409 9 189 313 10 40 chr5 168506416 168506515 -34579017 + L3 LINE CR1 1261 1356 -221 233 132 0 0 chr5 168506649 168506687 -34578845 - Alu SINE Alu -265 38 1 670 269 46 29 chr5 168506846 168506950 -34578582 - MER102b DNA MER1_type -1124 304 203 1188 264 122 12 chr5 168506950 168507443 -34578089 - MLT1H LTR MaLR -2 547 1 670 269 46 29 chr5 168507443 168507576 -34577956 - MER102b DNA MER1_type -1225 203 63 914 185 52 63 chr5 168507884 168508154 -34577378 - MER20B DNA MER1_type -2 781 515 2539 47 0 0 chr5 168508285 168508581 -34576951 - AluY SINE Alu -15 296 1 454 202 149 44 chr5 168508766 168508880 -34576652 - MER20B DNA MER1_type -567 216 91 273 151 0 0 chr5 168509410 168509463 -34576069 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2377 75 0 3 chr5 168509464 168509757 -34575775 - AluSc SINE Alu -14 295 4 2046 146 3 3 chr5 168509957 168510259 -34575273 - AluJb SINE Alu -9 303 2 650 222 90 58 chr5 168510268 168510611 -34574921 - L1ME LINE L1 -302 5819 5466 1250 171 68 13 chr5 168511344 168511578 -34573954 - AluJo SINE Alu -7 305 59 350 284 200 0 chr5 168511590 168511780 -34573752 - L1MC4 LINE L1 0 8042 7815 2410 92 0 7 chr5 168511808 168512113 -34573419 + AluSc SINE Alu 1 303 -6 788 257 150 6 chr5 168512200 168512554 -34572978 - L2 LINE L2 -995 2319 1915 393 211 18 37 chr5 168512615 168512724 -34572808 - MIR SINE MIR -69 139 33 358 248 53 26 chr5 168714500 168714613 -34370919 + L3 LINE CR1 946 1061 -516 612 324 142 10 chr5 168715101 168715518 -34370014 - MLT1K LTR MaLR 0 588 117 689 275 36 0 chr5 168715533 168715726 -34369806 + MLT1L LTR MaLR 354 553 -62 321 217 87 78 chr5 168715835 168715950 -34369582 + L1MCa LINE L1 1961 2076 -4350 * 332 286 79 58 chr5 168715848 168716412 -34369120 - L1MC4 LINE L1 -12 7949 6586 366 242 70 31 chr5 168716226 168716354 -34369178 + L1MCa LINE L1 1933 2065 -4361 185 0 0 39 chr5 168716570 168716596 -34368936 + (TAA)n Simple_repeat Simple_repeat 3 27 0 363 238 86 33 chr5 168716607 168716758 -34368774 + Charlie8 DNA MER1_type 127 285 -2132 316 267 56 0 chr5 168716956 168717046 -34368486 - MIR SINE MIR -70 192 98 846 111 90 62 chr5 168717346 168717377 -34368155 - AluJb SINE Alu -9 303 274 243 0 0 0 chr5 168717377 168717404 -34368128 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 846 111 90 62 chr5 168717404 168717516 -34368016 - AluJb SINE Alu -38 274 156 2089 122 3 16 chr5 168717649 168717952 -34367580 - AluSx SINE Alu -13 299 1 206 346 79 39 chr5 168718219 168718346 -34367186 - L2 LINE L2 -16 3256 3125 * 369 285 72 75 chr5 168718334 168718777 -34366755 + L2 LINE L2 2678 3254 -18 230 330 62 27 chr5 168719019 168719131 -34366401 + L3 LINE CR1 987 1102 -475 427 293 17 46 chr5 168719489 168719663 -34365869 + MIR SINE MIR 23 191 -71 349 291 146 31 chr5 168719754 168720008 -34365524 + L3 LINE CR1 1189 1471 -106 297 0 0 0 chr5 168720580 168720613 -34364919 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 520 285 62 69 chr5 168720614 168721098 -34364434 - L2 LINE L2 -36 3236 2750 2470 156 38 17 chr5 168721109 168721578 -34363954 + L1MB7 LINE L1 5696 6174 -10 514 287 37 24 chr5 168722274 168722438 -34363094 - MIR SINE MIR -6 256 91 342 115 0 0 chr5 168722481 168722533 -34362999 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 2167 119 17 0 chr5 168722533 168722835 -34362697 - AluSx SINE Alu -5 307 1 212 254 18 0 chr5 168723465 168723520 -34362012 + GA-rich Low_complexity Low_complexity 1 56 0 297 0 0 0 chr5 168723915 168723948 -34361584 + (TG)n Simple_repeat Simple_repeat 1 33 0 27 0 0 0 chr5 168723952 168723979 -34361553 + GC_rich Low_complexity Low_complexity 1 27 0 321 289 99 14 chr5 168724580 168724722 -34360810 - MIR3 SINE MIR -25 183 30 484 205 31 24 chr5 168724734 168724861 -34360671 + MIR SINE MIR 19 146 -62 239 239 14 42 chr5 168725681 168725752 -34359780 - MIR3 SINE MIR -1 207 139 494 244 96 87 chr5 168725760 168725916 -34359616 - L1ME4a LINE L1 -30 6091 5938 2546 75 0 0 chr5 168725916 168726221 -34359311 + AluSx SINE Alu 2 306 -6 494 244 96 87 chr5 168726221 168726535 -34358997 - L1ME4a LINE L1 -183 5938 5617 240 350 29 25 chr5 168726538 168726778 -34358754 - L1ME4a LINE L1 -2224 5584 5344 213 39 0 0 chr5 168727633 168727659 -34357873 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 2111 118 13 10 chr5 168727659 168727965 -34357567 - AluSx SINE Alu -5 307 1 484 265 126 0 chr5 168728147 168728298 -34357234 + MIR SINE MIR 72 241 -21 208 310 46 23 chr5 168730501 168730548 -34354984 - L2 LINE L2 -9 3263 3212 623 243 34 34 chr5 168730548 168730725 -34354807 - MER5B DNA MER1_type 0 178 2 208 310 46 23 chr5 168730725 168730764 -34354768 - L2 LINE L2 -60 3212 3175 355 258 65 0 chr5 168731633 168731757 -34353775 - L1MC4a LINE L1 -1862 5946 5815 2293 101 0 13 chr5 168731805 168732112 -34353420 - AluSx SINE Alu -9 303 1 33 25 0 0 chr5 168732112 168732152 -34353380 + AT_rich Low_complexity Low_complexity 1 40 0 1664 61 0 5 chr5 168732454 168732650 -34352882 - AluSq SINE Alu -118 195 1 372 252 202 35 chr5 168732653 168732911 -34352621 - L1MC4a LINE L1 -2201 5607 5307 302 343 66 12 chr5 168733014 168733180 -34352352 + MIR SINE MIR 46 220 -42 1441 104 0 0 chr5 168733431 168733614 -34351918 - AluSx SINE Alu -5 307 125 331 270 22 22 chr5 168733639 168733728 -34351804 - L1MC4 LINE L1 -1339 6703 6615 926 146 0 7 chr5 168733728 168733865 -34351667 - AluSx SINE Alu -177 136 1 836 222 13 0 chr5 168733892 168734045 -34351487 - FRAM SINE Alu -9 157 3 277 333 19 28 chr5 168734087 168734195 -34351337 + MIR SINE MIR 19 125 -137 447 68 0 0 chr5 168734245 168734304 -34351228 + (TTA)n Simple_repeat Simple_repeat 2 60 0 2392 95 0 0 chr5 168734306 168734600 -34350932 - AluSq SINE Alu -19 294 1 310 240 162 26 chr5 168734621 168734825 -34350707 + MIR SINE MIR 10 259 -3 2091 126 34 0 chr5 168734840 168735133 -34350399 + AluSx SINE Alu 5 307 -5 256 223 96 53 chr5 168735152 168735246 -34350286 - L2 LINE L2 -12 3260 3163 477 277 187 10 chr5 168735622 168735911 -34349621 - L2 LINE L2 -47 3266 2927 205 281 18 0 chr5 168736917 168736974 -34348558 + (TTCA)n Simple_repeat Simple_repeat 2 59 0 285 260 181 55 chr5 168736983 168737110 -34348422 - L2 LINE L2 -1 3271 3129 22 35 0 0 chr5 168737451 168737480 -34348052 + AT_rich Low_complexity Low_complexity 1 29 0 326 273 342 0 chr5 168737613 168737800 -34347732 - L1ME4a LINE L1 -7 6114 5864 235 303 81 0 chr5 168737984 168738083 -34347449 + MIR SINE MIR 86 192 -70 412 184 35 23 chr5 168738495 168738582 -34346950 - MIR SINE MIR -79 129 42 194 277 15 15 chr5 168738777 168738842 -34346690 - L2 LINE L2 -29 3243 3179 527 281 101 6 chr5 168739001 168739179 -34346353 + MIR SINE MIR 4 198 -64 1861 156 62 0 chr5 168739746 168739893 -34345639 - L1MA9 LINE L1 0 6312 6176 234 105 0 0 chr5 168739893 168739931 -34345601 + (TG)n Simple_repeat Simple_repeat 1 38 0 1861 156 62 0 chr5 168739931 168740122 -34345410 - L1MA9 LINE L1 -136 6176 5953 1900 136 16 3 chr5 168740122 168740430 -34345102 + L1MA9 LINE L1 5631 5942 -370 329 240 70 20 chr5 168740519 168740619 -34344913 + MIR SINE MIR 140 244 -18 1979 120 34 10 chr5 168740813 168741105 -34344427 - AluSx SINE Alu -13 299 1 224 283 278 10 chr5 168741240 168741438 -34344094 - L3 LINE CR1 -24 1553 1303 1726 178 14 3 chr5 168741455 168741742 -34343790 - AluJb SINE Alu -22 290 1 1578 176 12 4 chr5 168742184 168742439 -34343093 - AluJb SINE Alu -6 306 50 940 148 27 0 chr5 168742439 168742588 -34342944 - AluSg/x SINE Alu -6 306 154 318 111 0 0 chr5 168742592 168742637 -34342895 - AluJb SINE Alu -257 45 1 201 194 0 0 chr5 168742811 168742847 -34342685 - MIR SINE MIR -64 144 109 206 211 18 35 chr5 168743212 168743269 -34342263 - MIR SINE MIR -66 142 87 2101 102 4 7 chr5 168743500 168743774 -34341758 - AluSx SINE Alu -39 273 1 266 287 46 19 chr5 168744091 168744199 -34341333 + MIR SINE MIR 152 262 0 747 198 166 114 chr5 168745063 168745475 -34340057 + LTR33A LTR ERVL 23 463 -60 2007 128 0 10 chr5 168745475 168745764 -34339768 - AluSx SINE Alu -26 286 1 747 198 166 114 chr5 168745764 168745815 -34339717 + LTR33A LTR ERVL 463 510 -13 296 246 27 64 chr5 168746411 168746521 -34339011 + MIR SINE MIR 139 244 -18 432 292 41 70 chr5 168747129 168747372 -34338160 + MIR SINE MIR 12 247 -15 1872 145 30 14 chr5 168747881 168748177 -34337355 + AluJb SINE Alu 1 301 -11 36 23 0 0 chr5 168748434 168748477 -34337055 + AT_rich Low_complexity Low_complexity 1 43 0 849 260 87 85 chr5 168748625 168749326 -34336206 + L2 LINE L2 2383 3116 -197 1776 162 58 0 chr5 168749326 168749604 -34335928 - AluSx SINE Alu -18 294 1 849 260 87 85 chr5 168749604 168749716 -34335816 + L2 LINE L2 3116 3226 -87 458 167 98 20 chr5 168749721 168749823 -34335709 - MER53 DNA DNA -78 111 2 428 299 0 11 chr5 168749955 168750129 -34335403 + GA-rich Low_complexity Low_complexity 2 173 0 474 301 102 28 chr5 168750257 168750473 -34335059 - MIR SINE MIR 0 262 31 425 259 40 63 chr5 168750605 168750779 -34334753 + MIR SINE MIR 83 252 -10 200 294 0 39 chr5 168750800 168750851 -34334681 + L2 LINE L2 3200 3248 -24 585 266 116 5 chr5 168750894 168751093 -34334439 - MIR SINE MIR 0 262 42 1508 169 54 30 chr5 168751187 168751209 -34334323 - AluJo SINE Alu -10 302 282 336 24 0 0 chr5 168751209 168751250 -34334282 + (TG)n Simple_repeat Simple_repeat 1 41 0 1508 169 54 30 chr5 168751250 168751522 -34334010 - AluJo SINE Alu -30 282 1 250 261 44 53 chr5 168751637 168751754 -34333778 - MIR SINE MIR -83 125 1 783 257 78 51 chr5 168752109 168752405 -34333127 + L2 LINE L2 2968 3271 -1 216 0 0 0 chr5 168752427 168752451 -34333081 + (TTA)n Simple_repeat Simple_repeat 2 25 0 198 306 16 16 chr5 168752457 168752519 -34333013 + L2 LINE L2 3209 3270 -2 229 278 14 28 chr5 168753462 168753534 -34331998 - MER5A DNA MER1_type 0 189 119 684 271 93 104 chr5 168753541 168754120 -34331412 + MLT1K LTR MaLR 16 588 0 234 400 0 20 chr5 168754120 168754220 -34331312 + MER5A DNA MER1_type 76 173 -16 2676 129 36 10 chr5 168754377 168754794 -34330738 + MSTA LTR MaLR 1 428 0 480 274 109 46 chr5 168754799 168754901 -34330631 - MIR SINE MIR -73 189 70 2363 113 48 22 chr5 168754901 168755256 -34330276 - THE1B LTR MaLR 0 364 1 480 274 109 46 chr5 168755256 168755328 -34330204 - MIR SINE MIR -192 70 4 2103 144 0 0 chr5 168755391 168755682 -34329850 + AluSx SINE Alu 1 291 -21 500 97 65 29 chr5 168755682 168756030 -34329502 + (TATAA)n Simple_repeat Simple_repeat 1 360 0 218 69 103 17 chr5 168756044 168756102 -34329430 + (TATAA)n Simple_repeat Simple_repeat 1 63 0 515 160 0 0 chr5 168756102 168756177 -34329355 + AluSg/x SINE Alu 214 288 -21 287 53 93 0 chr5 168756185 168756260 -34329272 + (TA)n Simple_repeat Simple_repeat 1 82 0 287 243 54 63 chr5 168756505 168756616 -34328916 + L2 LINE L2 3128 3237 -35 2310 84 0 56 chr5 168756637 168756957 -34328575 + AluSg SINE Alu 1 302 -8 214 298 35 0 chr5 168756961 168757018 -34328514 + MIR SINE MIR 93 151 -111 255 385 27 7 chr5 168757390 168757538 -34327994 + L2 LINE L2 2607 2757 -557 2922 132 57 8 chr5 168757553 168758044 -34327488 - L1MC1 LINE L1 -1 6332 5818 569 281 25 60 chr5 168758359 168758505 -34327027 + MIR SINE MIR 21 158 -104 2347 100 0 0 chr5 168758505 168758795 -34326737 + AluSx SINE Alu 1 290 -22 569 281 25 60 chr5 168758795 168758883 -34326649 + MIR SINE MIR 158 247 -15 332 301 9 44 chr5 168758941 168759054 -34326478 + L2 LINE L2 3199 3307 -6 395 292 0 42 chr5 168759076 168759196 -34326336 + L2 LINE L2 3199 3313 0 2313 94 21 0 chr5 168759401 168759688 -34325844 - AluSg SINE Alu -17 293 1 278 254 0 104 chr5 168759901 168760035 -34325497 - L1MC5 LINE L1 -34 7927 7808 477 255 144 7 chr5 168760092 168760245 -34325287 - MIR SINE MIR -46 216 43 303 367 23 0 chr5 168761023 168761151 -34324381 + MIR SINE MIR 106 236 -26 927 215 44 48 chr5 168761386 168761637 -34323895 + MIR SINE MIR 11 260 -2 223 305 126 20 chr5 168761701 168761852 -34323680 - MIR3 SINE MIR -24 184 18 2320 105 0 7 chr5 168762416 168762721 -34322811 - AluSx SINE Alu -8 304 2 222 118 0 0 chr5 168762801 168762835 -34322697 + (ATGGTG)n Simple_repeat Simple_repeat 4 37 0 394 258 17 17 chr5 168762872 168762992 -34322540 - MIR SINE MIR -37 225 106 600 262 136 18 chr5 168763392 168763613 -34321919 - MIR SINE MIR -3 259 13 190 214 24 0 chr5 168763825 168763867 -34321665 - L2 LINE L2 -12 3301 3259 2396 92 3 0 chr5 168763941 168764247 -34321285 - AluSx SINE Alu -5 307 1 340 154 31 15 chr5 168764321 168764386 -34321146 + L2 LINE L2 3248 3313 0 313 314 35 53 chr5 168765642 168765701 -34319831 + MIR SINE MIR 9 68 -194 1941 134 38 10 chr5 168765701 168765993 -34319539 - AluJo SINE Alu -12 300 1 313 314 35 53 chr5 168765993 168766102 -34319430 + MIR SINE MIR 68 174 -88 349 290 0 41 chr5 168766113 168766258 -34319274 + MER5B DNA MER1_type 1 139 -39 304 229 69 6 chr5 168766449 168766554 -34318978 - MIR SINE MIR -55 207 97 393 167 37 28 chr5 168766966 168767074 -34318458 + L2 LINE L2 2932 3040 -273 3975 169 22 15 chr5 168767076 168768107 -34317425 - L1MB3 LINE L1 -207 5976 4937 347 204 142 0 chr5 168768961 168769074 -34316458 + MIR SINE MIR 17 145 -117 252 120 0 0 chr5 168769081 168769131 -34316401 + (TA)n Simple_repeat Simple_repeat 2 51 0 273 197 29 46 chr5 168770079 168770165 -34315367 - MIR SINE MIR -67 141 85 256 164 0 0 chr5 168770529 168770584 -34314948 + MIR SINE MIR 81 135 -73 324 0 0 0 chr5 168771245 168771281 -34314251 + (TA)n Simple_repeat Simple_repeat 2 37 0 23 33 0 0 chr5 168771923 168771953 -34313579 + AT_rich Low_complexity Low_complexity 1 30 0 263 219 59 59 chr5 168772125 168772214 -34313318 - L1ME4a LINE L1 -2 6119 6028 2420 81 7 3 chr5 168772214 168772523 -34313009 + AluSx SINE Alu 1 310 -2 263 219 59 59 chr5 168772523 168772552 -34312980 - L1ME4a LINE L1 -92 6029 6001 2330 85 0 0 chr5 168773338 168773619 -34311913 + AluSx SINE Alu 1 281 -31 346 186 142 18 chr5 168773823 168773936 -34311596 + L2 LINE L2 3182 3308 -5 207 304 43 11 chr5 168773985 168774077 -34311455 - MIR SINE MIR -92 116 22 205 160 20 40 chr5 168774440 168774490 -34311042 + MIR SINE MIR 23 71 -137 558 219 197 6 chr5 168774535 168774713 -34310819 + MIR SINE MIR 16 227 -35 683 157 81 66 chr5 168774840 168775038 -34310494 + MIR SINE MIR 27 227 -35 228 240 0 0 chr5 168775064 168775114 -34310418 + (CAT)n Simple_repeat Simple_repeat 1 50 0 1341 178 51 48 chr5 168775654 168775946 -34309586 + AluJo SINE Alu 1 293 -19 225 265 29 15 chr5 168775966 168776034 -34309498 + MIR SINE MIR 81 149 -59 2083 76 90 0 chr5 168776035 168776312 -34309220 + AluSx SINE Alu 1 302 -10 328 78 0 20 chr5 168776333 168776384 -34309148 + AluSc SINE Alu 244 293 -6 2239 100 3 0 chr5 168776392 168776691 -34308841 + AluY SINE Alu 3 302 -9 253 336 90 30 chr5 168776817 168776951 -34308581 - MIR SINE MIR -74 188 47 318 202 117 11 chr5 168777365 168777459 -34308073 - MER5A DNA MER1_type -36 153 50 432 247 0 0 chr5 168777479 168777576 -34307956 - L2 LINE L2 -6 3266 3170 256 284 0 0 chr5 168777889 168777963 -34307569 - MIR SINE MIR -95 113 40 209 132 26 0 chr5 168778536 168778574 -34306958 + (TA)n Simple_repeat Simple_repeat 1 39 0 1160 183 24 5 chr5 168778837 168779050 -34306482 - AluJo SINE Alu -20 292 76 208 340 104 9 chr5 168779200 168779306 -34306226 - L2 LINE L2 -5 3267 3152 262 282 191 29 chr5 168779778 168780055 -34305477 + L1ME2 LINE L1 5627 5948 -216 965 188 0 48 chr5 168780160 168780346 -34305186 + MER45A DNA AcHobo 2 178 0 1953 167 0 13 chr5 168780403 168780715 -34304817 - 7SLRNA srpRNA srpRNA -8 312 5 21 0 0 0 chr5 168781113 168781134 -34304398 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 168781880 168781918 -34303614 + AT_rich Low_complexity Low_complexity 1 38 0 2466 70 0 7 chr5 168782128 168782429 -34303103 - AluSq SINE Alu -14 299 1 287 254 0 0 chr5 168782478 168782549 -34302983 - L1MC/D LINE L1 -1944 5864 5794 243 319 43 9 chr5 168782902 168783018 -34302514 - MLT1L LTR MaLR 0 615 496 * 625 274 152 18 chr5 168783006 168783187 -34302345 - MLT1K LTR MaLR -144 444 289 2404 101 0 0 chr5 168783187 168783493 -34302039 - AluSc SINE Alu -3 306 1 625 274 152 18 chr5 168783493 168783588 -34301944 - MLT1K LTR MaLR -299 289 131 519 204 0 26 chr5 168783637 168783750 -34301782 + Charlie4a DNA MER1_type 44 153 -355 1027 169 90 0 chr5 168783755 168783944 -34301588 + AluJo SINE Alu 84 289 -23 1484 181 20 55 chr5 168783945 168784221 -34301311 + Charlie4a DNA MER1_type 158 422 -1539 2163 107 7 0 chr5 168784221 168784530 -34301002 + AluSx SINE Alu 1 311 0 1484 181 20 55 chr5 168784530 168784600 -34300932 + Charlie4a DNA MER1_type 422 493 -15 234 296 61 10 chr5 168784606 168784704 -34300828 - MLT1K LTR MaLR -483 105 3 316 285 67 36 chr5 168784762 168784927 -34300605 - MIR3 SINE MIR -31 177 8 1603 182 103 130 chr5 168784993 168785288 -34300244 + L1M4 LINE L1 2995 3297 -2849 523 114 0 25 chr5 168785288 168785359 -34300173 + AluS SINE Alu 2 72 -240 1470 82 5 10 chr5 168785359 168785555 -34299977 + AluY SINE Alu 114 308 -3 1603 182 103 130 chr5 168785562 168785947 -34299585 + L1M4 LINE L1 3297 3732 -2414 2268 89 11 0 chr5 168786177 168786486 -34299046 + AluSg SINE Alu 1 312 0 798 160 0 0 chr5 168786494 168786613 -34298919 + FLAM_C SINE Alu 1 119 -14 2200 103 0 52 chr5 168786636 168786781 -34298751 + AluSx SINE Alu 1 152 -160 2239 105 3 3 chr5 168786781 168787075 -34298457 + AluSx SINE Alu 1 294 -18 2200 103 0 52 chr5 168787075 168787258 -34298274 + AluSx SINE Alu 152 312 0 471 271 51 0 chr5 168787394 168787571 -34297961 + L2 LINE L2 2883 3068 -245 182 286 57 14 chr5 168787606 168787676 -34297856 + L2 LINE L2 3169 3241 -31 323 155 0 0 chr5 168787726 168787784 -34297748 - MIR SINE MIR -63 145 88 271 167 0 0 chr5 168787795 168787837 -34297695 + MER94 DNA DNA 2 43 -91 1063 222 112 72 chr5 168788520 168789025 -34296507 + MLT1H1 LTR MaLR 41 555 0 344 252 94 0 chr5 168789031 168789158 -34296374 + MIR SINE MIR 76 214 -48 30 27 0 0 chr5 168789317 168789354 -34296178 + AT_rich Low_complexity Low_complexity 1 37 0 330 286 0 11 chr5 168789804 168789895 -34295637 - MIR SINE MIR -70 192 103 1877 154 13 20 chr5 168789899 168790204 -34295328 + AluJb SINE Alu 1 303 -9 332 117 0 17 chr5 168790208 168790268 -34295264 + (GAAA)n Simple_repeat Simple_repeat 1 59 0 256 270 28 3 chr5 168790268 168790359 -34295173 - MIR SINE MIR -95 113 44 21 0 0 0 chr5 168791016 168791037 -34294495 + AT_rich Low_complexity Low_complexity 1 21 0 343 283 50 8 chr5 168791095 168791215 -34294317 + L2 LINE L2 3146 3270 -2 185 336 60 22 chr5 168791402 168791536 -34293996 + L2 LINE L2 3134 3272 0 2659 231 47 15 chr5 168791603 168792269 -34293263 + L1ME1 LINE L1 5363 6049 -117 876 140 0 110 chr5 168792269 168792433 -34293099 - FRAM SINE Alu -31 145 1 469 157 133 24 chr5 168792436 168792559 -34292973 + L1ME1 LINE L1 6037 6331 -3 24 32 0 0 chr5 168792575 168792606 -34292926 + AT_rich Low_complexity Low_complexity 1 31 0 339 364 0 8 chr5 168792629 168792758 -34292774 + L3 LINE CR1 1418 1545 -32 212 162 0 0 chr5 168792839 168792876 -34292656 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 444 277 27 7 chr5 168793067 168793215 -34292317 + L2 LINE L2 2548 2698 -616 250 237 40 0 chr5 168794904 168794980 -34290552 - L1ME LINE L1 -224 5897 5819 311 296 61 9 chr5 168795310 168795425 -34290107 - L2 LINE L2 0 3313 3193 367 195 17 76 chr5 168795437 168795555 -34289977 - L1ME LINE L1 -321 5800 5690 2327 100 0 0 chr5 168795599 168795899 -34289633 - AluSx SINE Alu -12 300 1 201 315 41 14 chr5 168796201 168796274 -34289258 - MIR SINE MIR -175 87 13 195 318 16 0 chr5 168796679 168796742 -34288790 + L2 LINE L2 3204 3267 -5 354 325 0 13 chr5 168796884 168797035 -34288497 + GA-rich Low_complexity Low_complexity 3 151 0 363 154 0 0 chr5 168797054 168797119 -34288413 + GA-rich Low_complexity Low_complexity 3 67 0 181 219 16 16 chr5 168797189 168797253 -34288279 + GA-rich Low_complexity Low_complexity 1 64 0 839 150 0 27 chr5 168797537 168797684 -34287848 + FLAM_C SINE Alu 1 143 0 6028 228 41 8 chr5 168797729 168799303 -34286229 + L1M4 LINE L1 2583 4208 -1938 210 344 73 47 chr5 168799348 168799540 -34285992 - L2 LINE L2 0 3272 3076 419 231 116 0 chr5 168800780 168800901 -34284631 + FLAM_C SINE Alu 9 143 0 2161 133 10 0 chr5 168800901 168801210 -34284322 + AluSx SINE Alu 1 312 0 318 352 0 0 chr5 168801210 168801338 -34284194 + L1ME LINE L1 5602 5729 -392 578 279 24 18 chr5 168801398 168801563 -34283969 - MIR SINE MIR -43 219 54 2003 139 20 7 chr5 168801593 168801894 -34283638 + AluJb SINE Alu 5 309 -3 21 0 0 0 chr5 168801910 168801931 -34283601 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr5 168803136 168803177 -34282355 + AT_rich Low_complexity Low_complexity 1 41 0 2262 104 3 0 chr5 168803424 168803723 -34281809 + AluSx SINE Alu 1 300 -12 1552 202 0 17 chr5 168803935 168804222 -34281310 - AluJo SINE Alu -30 282 1 461 165 24 16 chr5 168804527 168804654 -34280878 + CT-rich Low_complexity Low_complexity 2 129 0 367 273 70 14 chr5 168804689 168804832 -34280700 - L1ME4a LINE L1 -7 6114 5964 4603 143 19 70 chr5 168804869 168805141 -34280391 - L1MB5 LINE L1 -36 6138 5853 1956 151 0 10 chr5 168805141 168805439 -34280093 - AluSx SINE Alu -17 295 1 4603 143 19 70 chr5 168805439 168805473 -34280059 - L1MB5 LINE L1 -321 5853 5819 1619 147 58 61 chr5 168805473 168805786 -34279746 - AluJo SINE Alu 0 312 1 4603 143 19 70 chr5 168805786 168806343 -34279189 - L1MB5 LINE L1 -355 5819 5319 2214 136 3 3 chr5 168806343 168806681 -34278851 - L1PA16 LINE L1 -21 6145 5808 * 3286 195 31 87 chr5 168806678 168807474 -34278058 - L1MB5 LINE L1 -814 5332 4602 943 226 24 0 chr5 168807474 168807686 -34277846 + U3 snRNA snRNA 1 217 0 3286 195 31 87 chr5 168807686 168807888 -34277644 - L1MB5 LINE L1 -1544 4602 4390 836 300 38 19 chr5 168807891 168808001 -34277531 - L1ME4a LINE L1 -218 5903 5797 517 227 109 0 chr5 168808001 168808120 -34277412 - FLAM_A SINE Alu -1 132 1 836 300 38 19 chr5 168808120 168808382 -34277150 - L1ME4a LINE L1 -324 5797 5524 375 320 27 0 chr5 168808576 168808723 -34276809 + L2 LINE L2 3110 3260 -12 427 238 48 0 chr5 168808759 168808864 -34276668 + L2 LINE L2 3200 3309 -4 265 248 56 40 chr5 168810105 168810230 -34275302 + L2 LINE L2 3187 3313 0 2198 98 35 0 chr5 168810388 168810674 -34274858 + AluSq SINE Alu 1 296 -17 261 316 10 10 chr5 168811111 168811209 -34274323 + MLT1K LTR MaLR 139 236 -352 286 272 0 33 chr5 168811461 168811553 -34273979 + MLT1K LTR MaLR 500 588 0 525 303 54 4 chr5 168811586 168811824 -34273708 - L1P1 LINE L1 -317 5838 5588 2077 116 7 17 chr5 168811991 168812292 -34273240 - AluSx SINE Alu -14 298 1 545 343 43 30 chr5 168812576 168812946 -34272586 - L2 LINE L2 -74 3198 2824 361 207 74 50 chr5 168813584 168813705 -34271827 + L2 LINE L2 2325 2448 -866 1969 248 61 17 chr5 168813900 168814425 -34271107 - L1ME3A LINE L1 -23 6147 5600 478 333 122 30 chr5 168814425 168814941 -34270591 + L2 LINE L2 2687 3255 -17 635 278 0 28 chr5 168814998 168815214 -34270318 + MIR SINE MIR 47 256 -6 426 214 8 63 chr5 168815211 168815337 -34270195 - MIR SINE MIR -54 208 90 * 467 269 114 38 chr5 168815556 168816003 -34269529 + L1MC/D LINE L1 5115 5595 -761 313 254 42 0 chr5 168816058 168816129 -34269403 + L1MC/D LINE L1 5682 5755 -2053 2468 69 0 0 chr5 168816150 168816440 -34269092 - AluY SINE Alu -21 290 1 1666 172 6 46 chr5 168816541 168816866 -34268666 + AluJo SINE Alu 1 312 0 192 152 0 0 chr5 168817667 168817700 -34267832 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 613 241 41 129 chr5 168817711 168818051 -34267481 - L2 LINE L2 -12 3301 2992 674 210 140 23 chr5 168818113 168818327 -34267205 + MIR SINE MIR 12 250 -12 2916 223 75 34 chr5 168818335 168819354 -34266178 + L1MD2 LINE L1 5079 6132 -227 1605 154 8 0 chr5 168819354 168819600 -34265932 + AluJo SINE Alu 1 248 -64 2218 94 10 26 chr5 168819835 168820144 -34265388 - AluSg SINE Alu -6 304 1 231 270 95 0 chr5 168820447 168820521 -34265011 - L3 LINE CR1 -1 1576 1496 689 288 117 49 chr5 168820678 168820691 -34264841 - L2 LINE L2 0 3272 3261 207 0 0 0 chr5 168820691 168820714 -34264818 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 689 288 117 49 chr5 168820714 168821026 -34264506 - L2 LINE L2 -11 3261 2925 715 293 45 16 chr5 168821212 168821458 -34264074 + MIR SINE MIR 10 262 0 216 91 0 30 chr5 168822673 168822706 -34262826 + L2 LINE L2 3265 3296 -17 243 269 275 6 chr5 168823030 168823197 -34262335 + MIR SINE MIR 51 262 0 278 270 0 0 chr5 168823429 168823492 -34262040 + L2 LINE L2 3185 3247 -25 527 237 131 81 chr5 168824537 168824735 -34260797 - MIR SINE MIR 0 262 55 280 263 108 70 chr5 168825175 168825361 -34260171 - L2 LINE L2 -3 3310 3118 2097 151 16 0 chr5 168825728 168826033 -34259499 - AluSx SINE Alu -2 310 1 1713 215 55 14 chr5 168826355 168826773 -34258759 + MER113 DNA MER1_type? 2 436 -85 215 203 14 149 chr5 168827626 168827700 -34257832 + L2 LINE L2 3208 3271 -1 784 210 0 54 chr5 168828406 168828592 -34256940 + FRAM SINE Alu 1 176 0 4337 178 18 49 chr5 168829155 168829373 -34256159 - L1MB3 LINE L1 -1 6182 5959 1977 148 7 3 chr5 168829373 168829671 -34255861 - AluJb SINE Alu -13 299 1 4337 178 18 49 chr5 168829671 168829744 -34255788 - L1MB3 LINE L1 -224 5959 5885 2372 117 0 0 chr5 168829744 168830053 -34255479 - AluSg SINE Alu -1 309 1 4337 178 18 49 chr5 168830053 168830638 -34254894 - L1MB3 LINE L1 -298 5885 5339 2100 130 0 3 chr5 168830638 168830930 -34254602 - AluSx SINE Alu -21 291 1 4337 178 18 49 chr5 168830930 168831203 -34254329 - L1MB3 LINE L1 -844 5339 5059 378 57 0 0 chr5 168831292 168831345 -34254187 + (CA)n Simple_repeat Simple_repeat 2 54 0 189 311 8 74 chr5 168831364 168831486 -34254046 + MIR SINE MIR 16 129 -79 191 273 117 13 chr5 168831757 168831834 -34253698 - MIR SINE MIR -79 183 99 7311 45 21 17 chr5 168832002 168833574 -34251958 + SVA Other Other 1 1384 -2 500 124 48 138 chr5 168833612 168833679 -34251853 + LTR49-int LTR ERV1 3141 3190 -3141 2211 132 3 19 chr5 168833679 168833997 -34251535 - AluSq SINE Alu 0 313 1 500 124 48 138 chr5 168833997 168834074 -34251458 + LTR49-int LTR ERV1 3190 3272 -3059 325 200 0 0 chr5 168834134 168834194 -34251338 + LTR49-int LTR ERV1 3275 3334 -2997 482 184 20 0 chr5 168834259 168834357 -34251175 + LTR49-int LTR ERV1 3348 3447 -2884 665 324 25 62 chr5 168835467 168835788 -34249744 - L2 LINE L2 -50 3222 2914 1954 135 3 7 chr5 168835836 168836118 -34249414 + AluSx SINE Alu 1 281 -31 210 288 135 24 chr5 168836500 168836670 -34248862 + MER5A DNA MER1_type 1 189 0 * 615 301 12 66 chr5 168836670 168836924 -34248608 + MIR SINE MIR 9 248 -14 1479 284 86 4 chr5 168837253 168837753 -34247779 - MLT1K LTR MaLR -41 547 7 2011 168 21 0 chr5 168838841 168839175 -34246357 - MER58B DNA MER1_type 0 341 1 513 258 96 35 chr5 168839212 168839472 -34246060 - L1MC4a LINE L1 -1869 5939 5664 * 3248 195 49 6 chr5 168839471 168840123 -34245409 - L1MB8 LINE L1 0 6178 5491 2008 157 3 6 chr5 168840123 168840435 -34245097 - AluJb SINE Alu -1 311 1 3248 195 49 6 chr5 168840435 168840499 -34245033 - L1MB8 LINE L1 -687 5491 5431 180 0 0 0 chr5 168840534 168840554 -34244978 + (TG)n Simple_repeat Simple_repeat 2 21 0 2320 97 7 0 chr5 168840567 168840866 -34244666 - AluSp SINE Alu -10 303 3 2161 109 0 22 chr5 168840866 168841178 -34244354 - AluSx SINE Alu -7 305 1 595 360 92 0 chr5 168841221 168841657 -34243875 - L1MC4a LINE L1 -1941 5867 5392 426 275 39 96 chr5 168842127 168842305 -34243227 - MIR3 SINE MIR -22 186 19 2484 80 0 0 chr5 168842319 168842621 -34242911 + AluY SINE Alu 1 302 -9 188 268 214 9 chr5 168842732 168842844 -34242688 + MIR SINE MIR 41 175 -87 220 177 240 62 chr5 168842853 168842949 -34242583 + MIR SINE MIR 150 262 0 234 105 18 88 chr5 168843221 168843278 -34242254 + MER5B DNA MER1_type 1 53 -125 1626 160 85 0 chr5 168843289 168843571 -34241961 + AluJo SINE Alu 7 312 0 204 224 190 69 chr5 168843584 168843700 -34241832 - MER5B DNA MER1_type -48 130 1 * 343 161 8 78 chr5 168843695 168843819 -34241713 - MER5A DNA MER1_type 0 189 13 1385 309 72 9 chr5 168843867 168844394 -34241138 + MLT1K LTR MaLR 22 581 -7 295 315 0 37 chr5 168844492 168844600 -34240932 - MIR3 SINE MIR -22 186 83 228 196 59 78 chr5 168844894 168844996 -34240536 - L1ME4a LINE L1 -66 6055 5956 2227 98 10 7 chr5 168845049 168845346 -34240186 - AluSx SINE Alu -14 298 1 595 184 0 95 chr5 168846501 168846648 -34238884 + FLAM_C SINE Alu 1 133 0 249 322 134 41 chr5 168846724 168846895 -34238637 - L3 LINE CR1 -985 592 406 364 291 19 19 chr5 168847007 168847110 -34238422 + MIR SINE MIR 32 134 -74 636 48 84 12 chr5 168847325 168847662 -34237870 + (TG)n Simple_repeat Simple_repeat 1 361 0 618 216 13 20 chr5 168847771 168847924 -34237608 - AluYa5 SINE Alu -150 161 10 967 163 10 20 chr5 168847934 168848136 -34237396 - MSTA LTR MaLR -228 200 1 1054 178 66 39 chr5 168848143 168848402 -34237130 - MER67C LTR ERV1 -332 378 113 275 116 43 58 chr5 168848425 168848494 -34237038 - L1MA8 LINE L1 -18 6273 6206 * 11822 156 25 41 chr5 168848484 168850765 -34234767 + L1PBa LINE L1 1 2244 -4619 545 198 0 0 chr5 168850890 168851016 -34234516 - L1 LINE L1 -2598 3548 3423 206 193 18 0 chr5 168851066 168851123 -34234409 + (CA)n Simple_repeat Simple_repeat 2 59 0 2020 166 0 6 chr5 168851197 168851511 -34234021 + AluJb SINE Alu 1 312 0 299 247 0 43 chr5 168851511 168851604 -34233928 + HAL1 LINE L1 2319 2407 -100 726 266 11 37 chr5 168851691 168851879 -34233653 + MIR SINE MIR 32 214 -48 554 187 81 101 chr5 168851955 168852153 -34233379 - MER21B LTR ERV1 -11 852 659 608 147 10 0 chr5 168852153 168852255 -34233277 + FRAM SINE Alu 62 164 -12 410 228 22 0 chr5 168852261 168852353 -34233179 - MER21B LTR ERV1 -767 96 3 312 267 20 10 chr5 168853060 168853161 -34232371 + MIR SINE MIR 52 153 -55 411 258 157 50 chr5 168853193 168853352 -34232180 - MER5A DNA MER1_type 0 189 14 2258 108 14 0 chr5 168853939 168854236 -34231296 - AluSx SINE Alu -11 301 1 339 204 91 11 chr5 168854249 168854337 -34231195 - L1ME2 LINE L1 -10 6154 6060 23 0 0 0 chr5 168854443 168854466 -34231066 + AT_rich Low_complexity Low_complexity 1 23 0 2107 115 0 4 chr5 168854481 168854760 -34230772 + AluSg SINE Alu 1 278 -32 831 112 0 0 chr5 168854760 168854885 -34230647 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 1919 132 24 3 chr5 168854885 168855174 -34230358 - AluSx SINE Alu -17 295 1 2567 98 66 2 chr5 168855174 168855584 -34229948 - MER4C LTR ERV1 -29 436 1 468 0 0 0 chr5 168855827 168855879 -34229653 + (TG)n Simple_repeat Simple_repeat 2 53 0 466 335 60 5 chr5 168856418 168856603 -34228929 - MIR SINE MIR -57 205 11 450 284 64 7 chr5 168857500 168857641 -34227891 - MIR SINE MIR -1 261 113 406 266 187 19 chr5 168858553 168858767 -34226765 - MIR SINE MIR -12 250 1 257 279 114 38 chr5 168859469 168859627 -34225905 - L2 LINE L2 -257 3056 2887 228 284 49 49 chr5 168860033 168860135 -34225397 + MIR SINE MIR 23 124 -84 552 256 250 14 chr5 168860174 168860787 -34224745 - L2 LINE L2 -13 3300 2550 455 247 128 18 chr5 168861566 168861752 -34223780 - MIR SINE MIR -22 240 34 295 283 20 94 chr5 168862359 168862603 -34222929 - L2 LINE L2 -226 3046 2821 405 240 202 0 chr5 168862699 168862828 -34222704 + MIR SINE MIR 10 164 -98 559 0 14 14 chr5 168862830 168862902 -34222630 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 204 333 23 0 chr5 168863060 168863147 -34222385 - L2 LINE L2 -819 2495 2407 885 284 223 22 chr5 168863453 168863862 -34221670 - L2 LINE L2 -6 3307 2817 318 254 87 43 chr5 168863846 168864031 -34221501 - L2 LINE L2 -654 2660 2468 * 227 346 65 31 chr5 168864221 168864498 -34221034 - L2 LINE L2 -255 3017 2729 1264 113 0 0 chr5 168864750 168864918 -34220614 + AluSg/x SINE Alu 135 302 -10 607 266 46 0 chr5 168864919 168865092 -34220440 - MLT1K LTR MaLR -5 583 403 460 309 54 6 chr5 168865147 168865315 -34220217 - MLT1K LTR MaLR -278 310 135 186 43 0 0 chr5 168865381 168865404 -34220128 + (TG)n Simple_repeat Simple_repeat 2 24 0 255 339 54 27 chr5 168865452 168865564 -34219968 - MIR3 SINE MIR -54 154 40 249 227 0 15 chr5 168866000 168866066 -34219466 + MIR SINE MIR 65 129 -79 2391 95 20 0 chr5 168866709 168867014 -34218518 - AluSq SINE Alu -2 311 1 380 243 93 0 chr5 168867119 168867226 -34218306 - MER117 DNA MER1_type -80 117 1 27 0 0 0 chr5 168867816 168867843 -34217689 + AT_rich Low_complexity Low_complexity 1 27 0 361 220 92 37 chr5 168867886 168867995 -34217537 - L1ME4a LINE L1 -17 6104 5990 521 299 62 5 chr5 168868031 168868225 -34217307 - MIR SINE MIR -17 245 41 195 191 159 0 chr5 168868296 168868359 -34217173 + L3 LINE CR1 1464 1536 -41 207 250 14 14 chr5 168869364 168869436 -34216096 + C-rich Low_complexity Low_complexity 2 73 0 357 258 25 28 chr5 168870141 168870313 -34215219 - MIR SINE MIR -1 261 45 215 338 35 35 chr5 168870525 168870670 -34214862 + L3 LINE CR1 1430 1574 -3 351 155 17 0 chr5 168870777 168870835 -34214697 - L2 LINE L2 -1 3271 3213 192 40 0 0 chr5 168870968 168870993 -34214539 + (CTG)n Simple_repeat Simple_repeat 2 26 0 245 290 153 32 chr5 168871115 168871239 -34214293 - L2 LINE L2 -6 3307 3169 682 190 0 0 chr5 168871254 168871370 -34214162 + FLAM_A SINE Alu 16 131 -11 552 273 48 24 chr5 168871701 168871910 -34213622 - MIR SINE MIR -39 223 10 332 309 109 20 chr5 168871893 168872094 -34213438 - MIR SINE MIR -31 231 13 * 393 292 66 0 chr5 168872636 168872773 -34212759 + MIR3 SINE MIR 52 197 -11 292 311 80 4 chr5 168872792 168872923 -34212609 + MIR SINE MIR 14 155 -63 451 316 26 0 chr5 168873102 168873254 -34212278 - L3 LINE CR1 -74 1503 1348 197 250 0 54 chr5 168874837 168874893 -34210639 - L3 LINE CR1 -182 1395 1343 1922 133 35 3 chr5 168874916 168875231 -34210301 - L1PA16 LINE L1 -16 6150 5826 956 181 13 0 chr5 168875706 168875861 -34209671 + FRAM SINE Alu 1 157 -19 1503 199 53 4 chr5 168875910 168876191 -34209341 + AluJb SINE Alu 1 295 -17 535 173 156 56 chr5 168876407 168876586 -34208946 + L2 LINE L2 3103 3299 -14 1908 153 42 14 chr5 168876596 168876955 -34208577 + L1MB2 LINE L1 5800 6168 -3 294 180 0 0 chr5 168876969 168877030 -34208502 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 294 299 126 8 chr5 168877064 168877191 -34208341 - MIR3 SINE MIR -8 200 59 207 229 0 84 chr5 168877699 168877782 -34207750 + G-rich Low_complexity Low_complexity 1 76 0 2373 89 3 16 chr5 168878857 168879170 -34206362 - AluSc SINE Alu 0 309 1 221 240 152 22 chr5 168879178 168879288 -34206244 - MIR3 SINE MIR -119 143 6 206 179 77 0 chr5 168879705 168879744 -34205788 - L2 LINE L2 -5 3308 3267 2350 86 3 0 chr5 168879872 168880163 -34205369 + AluSp SINE Alu 1 292 -21 311 258 0 54 chr5 168880248 168880341 -34205191 - MIR SINE MIR -91 117 30 242 291 18 36 chr5 168880904 168881014 -34204518 + MER5A DNA MER1_type 2 109 -80 441 220 138 19 chr5 168881082 168881241 -34204291 - MER5B DNA MER1_type 0 178 1 603 304 112 10 chr5 168881242 168881538 -34203994 + L3 LINE CR1 1212 1537 -40 487 261 196 5 chr5 168882352 168882536 -34202996 + MIR SINE MIR 23 241 -21 1926 152 3 25 chr5 168884196 168884512 -34201020 - AluJo SINE Alu -3 309 1 348 228 33 22 chr5 168884567 168884659 -34200873 + MIR SINE MIR 127 219 -43 225 132 0 0 chr5 168885010 168885048 -34200484 + (CAG)n Simple_repeat Simple_repeat 2 39 0 280 338 75 0 chr5 168887576 168887736 -34197796 + MIR SINE MIR 15 186 -76 438 202 18 55 chr5 168888088 168888197 -34197335 + MIR3 SINE MIR 65 169 -39 230 287 202 0 chr5 168888241 168888335 -34197197 + MER103 DNA DNA 4 116 -50 1905 139 4 0 chr5 168888462 168888735 -34196797 + AluSx SINE Alu 1 274 -38 385 335 7 20 chr5 168889285 168889463 -34196069 + MER5A DNA MER1_type 6 176 -2 283 319 89 15 chr5 168889636 168889771 -34195761 - L3 LINE CR1 -496 1081 937 312 305 37 24 chr5 168889938 168890102 -34195430 + L2 LINE L2 2734 2899 -415 205 278 56 111 chr5 168890254 168890380 -34195152 + L2 LINE L2 3179 3297 -16 250 299 11 11 chr5 168890772 168890859 -34194673 - MIR3 SINE MIR -13 195 109 630 211 28 94 chr5 168891066 168891279 -34194253 - MIR SINE MIR -28 234 36 187 185 12 136 chr5 168891982 168892049 -34193483 - MER5B DNA MER1_type 0 178 121 2122 116 3 27 chr5 168892049 168892350 -34193182 + AluSx SINE Alu 1 294 -18 187 185 12 136 chr5 168892350 168892363 -34193169 - MER5B DNA MER1_type -57 121 108 2662 45 0 0 chr5 168892402 168892711 -34192821 - AluY SINE Alu -2 309 1 300 218 218 77 chr5 168892778 168892948 -34192584 - MER112 DNA MER1_type -52 208 15 467 325 64 11 chr5 168892956 168893144 -34192388 - MIR SINE MIR -53 209 12 329 316 22 43 chr5 168893147 168893286 -34192246 + MER5A DNA MER1_type 1 136 -53 191 172 0 0 chr5 168894075 168894104 -34191428 - L2 LINE L2 -25 3247 3219 819 184 10 75 chr5 168894567 168894768 -34190764 + MER5A DNA MER1_type 2 189 0 444 238 193 55 chr5 168895407 168895588 -34189944 + MIR SINE MIR 57 262 0 533 300 97 35 chr5 168896006 168896490 -34189042 - L1M4 LINE L1 -2154 3992 3479 1101 246 97 34 chr5 168896490 168897036 -34188496 + L2 LINE L2 2714 3309 -4 583 263 67 43 chr5 168897672 168897881 -34187651 - MIR SINE MIR -27 235 22 835 180 26 82 chr5 168898564 168898797 -34186735 + AluJo SINE Alu 1 220 -92 226 192 128 0 chr5 168898875 168898953 -34186579 + L1ME4a LINE L1 5736 5823 -298 756 240 133 14 chr5 168899752 168900106 -34185426 + L1ME1 LINE L1 4268 4663 -1483 * 2663 228 46 10 chr5 168900102 168900782 -34184750 + L1ME1 LINE L1 5448 6151 -15 261 219 40 0 chr5 168901111 168901200 -34184332 + L1M3 LINE L1 5624 5713 -408 298 272 42 92 chr5 168901231 168901514 -34184018 + L1ME4a LINE L1 5836 6104 -17 436 255 47 34 chr5 168902679 168902807 -34182725 + MIR3 SINE MIR 1 133 -75 967 198 113 0 chr5 168902807 168903019 -34182513 + MER46A DNA MER2_type 1 236 0 436 255 47 34 chr5 168903019 168903039 -34182493 + MIR3 SINE MIR 133 151 -57 823 242 23 41 chr5 168903111 168903330 -34182202 + MIR SINE MIR 47 261 -1 788 141 0 0 chr5 168903739 168903860 -34181672 + MSTB1 LTR MaLR 1 121 -311 1263 174 9 0 chr5 168903894 168904107 -34181425 + MSTB1 LTR MaLR 218 432 0 366 274 204 0 chr5 168904173 168904286 -34181246 + L2 LINE L2 3137 3272 0 380 306 75 0 chr5 168904303 168904463 -34181069 + L3 LINE CR1 1392 1563 -14 184 222 37 19 chr5 168905151 168905205 -34180327 - L3 LINE CR1 -329 1248 1194 * 231 305 12 37 chr5 168905200 168905282 -34180250 - MIR3 SINE MIR -43 165 86 215 203 29 167 chr5 168905211 168905349 -34180183 + L2 LINE L2 1384 1502 -1812 * 239 294 11 54 chr5 168906411 168906503 -34179029 - MIR3 SINE MIR -34 174 87 229 204 62 133 chr5 168907036 168907149 -34178383 - MER102a DNA MER1_type -4 326 222 398 191 79 11 chr5 168907426 168907515 -34178017 + L2 LINE L2 3219 3313 0 466 310 45 40 chr5 168907654 168907854 -34177678 - MIR3 SINE MIR -5 203 3 896 141 0 7 chr5 168908915 168909050 -34176482 - FLAM_C SINE Alu -9 134 1 483 250 186 5 chr5 168909559 168909763 -34175769 - MER112 DNA MER1_type -12 248 8 473 269 0 0 chr5 168909789 168909893 -34175639 + U13 snRNA snRNA 1 104 0 272 248 151 41 chr5 168910014 168910232 -34175300 + L1ME4a LINE L1 5868 6109 -12 * 298 189 0 17 chr5 168910229 168910301 -34175231 + L1MC4 LINE L1 7534 7602 -206 2006 132 0 23 chr5 168910378 168910682 -34174850 + AluJo SINE Alu 11 307 -5 315 0 0 0 chr5 168910699 168910734 -34174798 + (CA)n Simple_repeat Simple_repeat 2 36 0 330 174 35 70 chr5 168910734 168910820 -34174712 - L1MCa LINE L1 -4349 2077 1995 * 349 322 0 11 chr5 168910743 168910833 -34174699 + L1MC4 LINE L1 6614 6702 -1340 602 131 0 10 chr5 168910843 168910942 -34174590 + MER4A LTR ERV1 1 98 -566 1548 134 25 78 chr5 168910942 168911307 -34174225 + MER4A LTR ERV1 261 664 0 2265 104 0 7 chr5 168911389 168911688 -34173844 + AluSx SINE Alu 1 297 -15 345 227 8 53 chr5 168911802 168911934 -34173598 + L1MC4 LINE L1 7916 8041 -1 454 261 89 49 chr5 168912621 168912824 -34172708 + MIR SINE MIR 3 213 -49 254 309 52 31 chr5 168912905 168913002 -34172530 + L2 LINE L2 3168 3266 -6 2375 60 18 0 chr5 168913112 168913396 -34172136 + AluY SINE Alu 1 289 -22 1807 143 0 18 chr5 168913406 168913686 -34171846 + AluJb SINE Alu 38 312 0 202 216 0 0 chr5 168913745 168913782 -34171750 + (CATA)n Simple_repeat Simple_repeat 2 38 0 354 294 34 40 chr5 168914024 168914223 -34171309 - MIR3 SINE MIR -43 165 17 194 330 165 10 chr5 168915070 168915173 -34170359 - MIR SINE MIR -71 137 19 288 297 72 65 chr5 168915767 168915905 -34169627 + MIR3 SINE MIR 18 156 -52 251 312 48 8 chr5 168915949 168916074 -34169458 - MER20B DNA MER1_type -611 172 43 1405 167 48 80 chr5 168916113 168916424 -34169108 + AluJb SINE Alu 1 301 -11 827 50 78 71 chr5 168917049 168917190 -34168342 + MER30 DNA MER1_type 3 144 -86 534 86 258 0 chr5 168917709 168917802 -34167730 + MER30 DNA MER1_type 114 230 0 213 339 52 9 chr5 168917871 168917986 -34167546 + MIR3 SINE MIR 75 194 -14 1878 134 41 14 chr5 168918205 168918495 -34167037 + AluSx SINE Alu 1 298 -14 674 228 0 16 chr5 168918522 168918645 -34166887 + FLAM_A SINE Alu 5 125 -8 586 289 47 38 chr5 168919072 168919307 -34166225 - MIR SINE MIR -11 251 15 352 98 16 33 chr5 168920145 168920206 -34165326 + AluJ/FLAM SINE Alu 15 74 -228 515 218 35 35 chr5 168920279 168920449 -34165083 + L1ME4a LINE L1 5952 6121 0 240 288 108 0 chr5 168920789 168920900 -34164632 - MIR3 SINE MIR -1 207 85 252 256 61 0 chr5 168920947 168921029 -34164503 - MIR SINE MIR -29 233 147 219 380 50 20 chr5 168921031 168921131 -34164401 - MIR3 SINE MIR -96 112 10 401 277 0 10 chr5 168921684 168921785 -34163747 + MIR SINE MIR 43 142 -66 3138 210 83 38 chr5 168922297 168922880 -34162652 + L1MEc LINE L1 2015 2570 -3645 1908 161 13 0 chr5 168922880 168923179 -34162353 - AluJo SINE Alu -9 303 1 3138 210 83 38 chr5 168923179 168923653 -34161879 + L1MEc LINE L1 2570 3021 -3194 1574 171 18 18 chr5 168923653 168923934 -34161598 + AluJo SINE Alu 1 281 -31 213 39 0 0 chr5 168923937 168923963 -34161569 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 3138 210 83 38 chr5 168923963 168924013 -34161519 + L1MEc LINE L1 3022 3159 -3056 3271 244 104 8 chr5 168925422 168926420 -34159112 + L1MEc LINE L1 3403 4496 -1719 330 286 183 0 chr5 168926430 168926556 -34158976 + MIR3 SINE MIR 12 160 -48 180 351 0 0 chr5 168926712 168926769 -34158763 + MIR3 SINE MIR 151 207 -1 303 295 42 0 chr5 168927185 168927280 -34158252 - MIR SINE MIR -114 148 50 2452 69 3 25 chr5 168927330 168927648 -34157884 + AluSq SINE Alu 1 311 -2 648 233 9 0 chr5 168928156 168928272 -34157260 + FLAM_A SINE Alu 6 122 -20 468 328 0 0 chr5 168929439 168929558 -34155974 + MIR3 SINE MIR 84 202 -6 445 260 30 47 chr5 168929851 168930020 -34155512 - MIR SINE MIR -50 212 47 232 200 238 0 chr5 168930859 168930939 -34154593 - MIR SINE MIR -89 173 75 396 0 0 0 chr5 168931142 168931186 -34154346 + (TG)n Simple_repeat Simple_repeat 1 44 0 1902 152 0 7 chr5 168931186 168931469 -34154063 - AluJb SINE Alu -31 281 1 2409 93 6 0 chr5 168933613 168933924 -34151608 - AluSp SINE Alu 0 313 1 291 276 59 65 chr5 168934501 168934671 -34150861 + MER5A DNA MER1_type 21 189 0 854 142 0 30 chr5 168935072 168935206 -34150326 + AluJo SINE Alu 5 134 -178 23 0 0 0 chr5 168935207 168935230 -34150302 + AT_rich Low_complexity Low_complexity 1 23 0 1477 174 53 33 chr5 168935263 168935567 -34149965 - AluJb SINE Alu -2 310 1 37 0 0 0 chr5 168935624 168935661 -34149871 + AT_rich Low_complexity Low_complexity 1 37 0 894 153 0 0 chr5 168935661 168935779 -34149753 - FLAM_C SINE Alu -15 118 1 889 142 130 0 chr5 168935945 168936073 -34149459 + MER3 DNA MER1_type 1 158 -51 1753 186 0 19 chr5 168936073 168936384 -34149148 - AluJb SINE Alu -7 305 1 889 142 130 0 chr5 168936384 168936424 -34149108 + MER3 DNA MER1_type 158 191 -18 210 95 24 24 chr5 168937136 168937178 -34148354 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 299 296 26 72 chr5 168937579 168937731 -34147801 + MIR SINE MIR 16 160 -102 27 0 0 0 chr5 168938243 168938270 -34147262 + GC_rich Low_complexity Low_complexity 1 27 0 182 217 272 33 chr5 168939221 168939313 -34146219 + L3 LINE CR1 1427 1540 -37 685 252 134 24 chr5 168939359 168939649 -34145883 + L2 LINE L2 2524 2845 -469 245 255 66 85 chr5 168939676 168939782 -34145750 + MIR SINE MIR 5 108 -154 586 218 265 60 chr5 168939807 168940207 -34145325 + L2 LINE L2 2400 2881 -433 259 321 123 0 chr5 168940581 168940687 -34144845 + L2 LINE L2 3136 3254 -18 279 208 0 0 chr5 168940936 168940989 -34144543 + Charlie8 DNA MER1_type 1367 1419 -998 301 245 324 29 chr5 168941152 168941291 -34144241 + L2 LINE L2 2615 2794 -520 1094 110 0 0 chr5 168941294 168941460 -34144072 - AluSc SINE Alu 0 298 133 2458 69 0 7 chr5 168941460 168941764 -34143768 - AluY SINE Alu -9 302 1 1946 114 83 0 chr5 168941873 168942162 -34143370 - AluSq SINE Alu 0 313 1 506 289 107 20 chr5 168942203 168942456 -34143076 + L2 LINE L2 2988 3262 -51 903 221 6 0 chr5 168944879 168945051 -34140481 + MER5B DNA MER1_type 1 173 -5 917 182 80 6 chr5 168945119 168945295 -34140237 - MER5A DNA MER1_type 0 189 1 255 61 0 0 chr5 168945489 168945522 -34140010 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 753 218 99 0 chr5 168945522 168945664 -34139868 - FAM SINE Alu -24 161 6 749 119 110 8 chr5 168945743 168945861 -34139671 + FLAM_C SINE Alu 1 130 -3 202 331 163 0 chr5 168946400 168946560 -34138972 + L2 LINE L2 2570 2755 -559 329 262 119 32 chr5 168946899 168947025 -34138507 + L2 LINE L2 3173 3309 -4 199 238 0 0 chr5 168947359 168947401 -34138131 + L2 LINE L2 3263 3304 -9 1729 124 89 0 chr5 168947436 168947722 -34137810 + AluSx SINE Alu 1 309 0 1991 149 13 10 chr5 168948723 168949031 -34136501 + AluJo SINE Alu 1 309 -3 216 299 103 28 chr5 168950747 168950854 -34134678 - MIR SINE MIR -62 146 32 1842 138 10 10 chr5 168950876 168951166 -34134366 + AluJb SINE Alu 18 307 -5 2293 85 0 3 chr5 168951339 168951632 -34133900 - AluSg1 SINE Alu -17 292 1 2224 124 0 0 chr5 168951644 168951951 -34133581 - AluSx SINE Alu -5 307 1 24 77 0 0 chr5 168953195 168953247 -34132285 + AT_rich Low_complexity Low_complexity 1 52 0 2313 90 0 3 chr5 168954761 168955062 -34130470 - AluSx SINE Alu -12 300 1 1462 180 61 17 chr5 168955563 168955858 -34129674 + AluJo SINE Alu 1 308 -4 214 194 65 11 chr5 168956197 168956290 -34129242 + (TA)n Simple_repeat Simple_repeat 1 98 0 500 299 51 0 chr5 168959238 168959395 -34126137 - MIR3 SINE MIR -2 206 42 243 94 0 0 chr5 168959601 168959633 -34125899 + U2 snRNA snRNA 4 35 -153 562 175 136 0 chr5 168959897 168960036 -34125496 + FLAM_C SINE Alu 1 153 0 1735 160 57 0 chr5 168960423 168960544 -34124988 + AluJb SINE Alu 1 114 -198 274 23 47 0 chr5 168960544 168960587 -34124945 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1735 160 57 0 chr5 168960587 168960747 -34124785 + AluJb SINE Alu 114 298 -14 181 366 168 20 chr5 168960791 168960892 -34124640 + MIR3 SINE MIR 48 163 -45 348 350 19 25 chr5 168962900 168963060 -34122472 + L2 LINE L2 2932 3090 -182 2359 110 0 0 chr5 168963266 168963565 -34121967 - AluSx SINE Alu -13 299 1 1334 216 29 117 chr5 168964092 168964478 -34121054 + L1MCa LINE L1 1001 1419 -5007 1637 125 4 0 chr5 168964478 168964718 -34120814 + AluSq SINE Alu 63 303 -10 2257 96 0 7 chr5 168964718 168965009 -34120523 + AluSc SINE Alu 1 289 -20 1334 216 29 117 chr5 168965009 168965283 -34120249 + L1MCa LINE L1 1418 1597 -4829 1616 185 0 27 chr5 168965283 168965580 -34119952 - AluJo SINE Alu -23 289 1 1334 216 29 117 chr5 168965580 168965635 -34119897 + L1MCa LINE L1 1597 1655 -4771 1026 185 0 22 chr5 168965642 168965820 -34119712 + AluJb SINE Alu 137 310 -2 331 200 9 9 chr5 168965889 168965999 -34119533 + GA-rich Low_complexity Low_complexity 1 110 0 408 269 107 26 chr5 168966006 168966240 -34119292 + L1MCa LINE L1 1926 2178 -4429 929 117 0 23 chr5 168966275 168966403 -34119129 - FLAM_C SINE Alu -17 126 2 1456 204 82 5 chr5 168966407 168966795 -34118737 + L1MCa LINE L1 2186 2603 -4004 184 346 34 45 chr5 168967404 168967583 -34117949 - L2 LINE L2 -405 2909 2733 2183 127 13 0 chr5 168967742 168968050 -34117482 + AluSx SINE Alu 1 312 0 192 233 33 17 chr5 168968469 168968529 -34117003 - L2 LINE L2 -1 3312 3252 261 285 42 57 chr5 168968541 168968734 -34116798 + L2 LINE L2 2437 2626 -688 1955 148 0 16 chr5 168968941 168969246 -34116286 - AluJo SINE Alu -12 300 1 403 264 34 32 chr5 168969246 168969501 -34116031 + L2 LINE L2 3016 3311 -2 290 352 63 0 chr5 168969964 168970123 -34115409 - L2 LINE L2 -908 2406 2238 1863 125 0 73 chr5 168970430 168970743 -34114789 + AluSx SINE Alu 1 290 -22 2407 79 0 32 chr5 168970752 168971068 -34114464 + AluY SINE Alu 1 306 -5 2316 85 0 3 chr5 168971080 168971373 -34114159 + AluSg1 SINE Alu 1 292 -17 1858 138 10 10 chr5 168971546 168971836 -34113696 - AluJb SINE Alu -5 307 18 192 233 33 17 chr5 168974067 168974127 -34111405 - L2 LINE L2 -1 3312 3252 282 283 44 62 chr5 168974139 168974365 -34111167 + L2 LINE L2 2437 2658 -656 713 261 42 46 chr5 168974374 168974511 -34111021 + L2 LINE L2 2882 3018 -295 2025 148 0 10 chr5 168974511 168974814 -34110718 - AluJo SINE Alu -12 300 1 713 261 42 46 chr5 168974814 168974959 -34110573 + L2 LINE L2 3018 3163 -150 290 352 63 0 chr5 168975532 168975691 -34109841 - L2 LINE L2 -908 2406 2238 1863 125 0 73 chr5 168975998 168976311 -34109221 + AluSx SINE Alu 1 290 -22 2375 77 0 43 chr5 168976320 168976643 -34108889 + AluY SINE Alu 1 309 -2 1782 163 51 20 chr5 168976658 168977013 -34108519 + L1MB4 LINE L1 5530 5895 -279 325 175 48 0 chr5 168977058 168977121 -34108411 + L1MB4 LINE L1 5879 5944 -230 751 210 0 0 chr5 168977121 168977259 -34108273 + FRAM SINE Alu 1 131 -45 657 184 203 0 chr5 168977304 168977462 -34108070 + L1MB4 LINE L1 5935 6124 -56 567 188 101 62 chr5 168977587 168977795 -34107737 + L1ME1 LINE L1 5946 6161 -5 913 201 6 12 chr5 168977858 168978027 -34107505 - FRAM SINE Alu -11 165 1 1311 134 58 5 chr5 168978271 168978495 -34107037 + MER46A DNA MER2_type 1 236 0 275 296 148 37 chr5 168978760 168978836 -34106696 - MIR3 SINE MIR -8 200 134 1969 164 3 3 chr5 168978836 168979146 -34106386 + AluSx SINE Alu 1 310 -2 275 296 148 37 chr5 168979146 168979231 -34106301 - MIR3 SINE MIR -74 134 21 40 0 0 0 chr5 168979449 168979489 -34106043 + AT_rich Low_complexity Low_complexity 1 40 0 2481 70 3 3 chr5 168979539 168979841 -34105691 - AluSc SINE Alu -7 302 1 234 298 58 54 chr5 168979917 168980122 -34105410 - L1MC4 LINE L1 -3 8039 7834 503 202 19 0 chr5 168980130 168980234 -34105298 - L1MD3 LINE L1 -2 7993 7888 2508 72 0 7 chr5 168980241 168980546 -34104986 - AluY SINE Alu -8 303 1 1786 133 59 4 chr5 168980547 168980818 -34104714 - AluJb SINE Alu -12 300 15 889 149 0 8 chr5 168981159 168981293 -34104239 + FLAM_C SINE Alu 1 133 0 2161 96 0 20 chr5 168981327 168981465 -34104067 + AluSq SINE Alu 1 140 -187 2366 97 0 0 chr5 168981465 168981765 -34103767 + AluSc SINE Alu 1 300 -9 2161 96 0 20 chr5 168981765 168981959 -34103573 + AluSq SINE Alu 140 327 0 495 225 202 0 chr5 168982021 168982194 -34103338 + L2 LINE L2 3102 3309 -4 1893 166 0 3 chr5 168982403 168982699 -34102833 + AluJb SINE Alu 1 295 -17 202 260 20 0 chr5 168982888 168982938 -34102594 - MER5A DNA MER1_type -138 51 1 351 295 119 29 chr5 168982945 168983155 -34102377 + MIR SINE MIR 32 260 -2 279 307 0 18 chr5 168983446 168983560 -34101972 + MIR SINE MIR 33 144 -64 868 151 0 22 chr5 168984772 168984911 -34100621 + AluJo SINE Alu 1 136 -176 259 308 86 37 chr5 168985488 168985661 -34099871 + MIR SINE MIR 28 212 -50 726 262 48 16 chr5 168985693 168985941 -34099591 - MIR SINE MIR -6 256 1 1563 155 0 4 chr5 168986102 168986354 -34099178 + AluJb SINE Alu 62 312 0 206 304 58 0 chr5 168986419 168986488 -34099044 - MIR SINE MIR -124 138 66 1872 136 3 56 chr5 168987248 168987572 -34097960 - AluJo SINE Alu -3 309 3 303 252 122 24 chr5 168987779 168987801 -34097731 - MER5B DNA MER1_type 0 178 160 1765 104 0 4 chr5 168987801 168988031 -34097501 + AluSq SINE Alu 68 296 -17 303 252 122 24 chr5 168988031 168988131 -34097401 - MER5B DNA MER1_type -18 160 44 1538 178 40 66 chr5 168988132 168988358 -34097174 + L1PA16 LINE L1 5800 6014 -152 2379 96 3 0 chr5 168988358 168988659 -34096873 + AluSq SINE Alu 1 302 -11 1538 178 40 66 chr5 168988659 168988809 -34096723 + L1PA16 LINE L1 6014 6166 0 1997 157 6 6 chr5 168988837 168989149 -34096383 - AluJo SINE Alu 0 312 1 266 213 111 46 chr5 168989207 168989315 -34096217 - L1MC4a LINE L1 -1867 5941 5827 752 257 139 72 chr5 168989323 168989721 -34095811 - MLT1G LTR MaLR -11 579 172 1639 191 7 10 chr5 168989721 168990019 -34095513 + AluJo SINE Alu 6 302 -10 752 257 139 72 chr5 168990019 168990167 -34095365 - MLT1G LTR MaLR -418 172 35 463 197 68 26 chr5 168990174 168990291 -34095241 - L1MC4a LINE L1 -1998 5810 5689 2578 34 3 7 chr5 168990409 168990707 -34094825 - AluY SINE Alu -14 297 1 186 118 0 0 chr5 168991246 168991280 -34094252 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 277 286 131 11 chr5 168991615 168991790 -34093742 + L1ME LINE L1 5652 5847 -274 2211 114 13 0 chr5 168991806 168992112 -34093420 - AluSq SINE Alu -3 310 1 2295 92 0 0 chr5 168992315 168992607 -34092925 + AluSc SINE Alu 2 293 -16 21 57 0 0 chr5 168992618 168992653 -34092879 + AT_rich Low_complexity Low_complexity 1 35 0 314 345 41 7 chr5 168992765 168992910 -34092622 - MIR SINE MIR -79 183 34 653 206 15 37 chr5 168992941 168993077 -34092455 - FLAM_A SINE Alu 0 133 1 193 287 69 11 chr5 168993775 168993862 -34091670 + L2 LINE L2 2543 2634 -680 249 277 15 0 chr5 168993926 168993991 -34091541 - L3 LINE CR1 -112 1465 1400 345 211 53 0 chr5 168994027 168994103 -34091429 - MER116 DNA Mariner 0 80 1 350 239 239 6 chr5 168994133 168994300 -34091232 - MIR SINE MIR -56 206 1 2262 119 0 0 chr5 168994682 168994994 -34090538 - AluSx SINE Alu 0 312 1 2280 128 46 120 chr5 168995021 168995538 -34089994 + L1MB7 LINE L1 5620 6098 -86 899 195 27 0 chr5 168996086 168996235 -34089297 - FRAM SINE Alu -24 152 1 581 230 135 68 chr5 168996688 168996870 -34088662 + L1ME4a LINE L1 5550 5755 -366 926 169 169 0 chr5 168996870 168997054 -34088478 + MER20 DNA MER1_type 2 216 -3 581 230 135 68 chr5 168997054 168997123 -34088409 + L1ME4a LINE L1 5755 5818 -303 1874 169 7 3 chr5 168997134 168997436 -34088096 + AluJb SINE Alu 1 303 -9 368 253 33 0 chr5 168997464 168997555 -34087977 + 5S rRNA rRNA 1 94 -27 376 146 0 0 chr5 168997557 168997612 -34087920 - FLAM_A SINE Alu -45 88 34 3872 168 61 10 chr5 168997638 168998327 -34087205 - MER21B LTR ERV1 -139 724 1 396 265 71 59 chr5 168998328 168998581 -34086951 - L2 LINE L2 -22 3291 3036 2146 125 6 3 chr5 168999036 168999347 -34086185 - AluSx SINE Alu 0 312 1 353 209 130 9 chr5 168999506 168999621 -34085911 + L1ME4a LINE L1 5991 6119 -2 634 188 138 17 chr5 169000991 169001172 -34084360 - L1MC4 LINE L1 0 8042 7840 288 100 60 0 chr5 169001184 169001234 -34084298 + L1MC4 LINE L1 7783 7835 -207 348 194 46 28 chr5 169001316 169001424 -34084108 - L1MC4 LINE L1 -189 7853 7744 805 219 0 7 chr5 169001424 169001579 -34083953 + AluJo SINE Alu 2 155 -157 4935 157 28 51 chr5 169001579 169002571 -34082961 + LTR5 LTR ERVK 1 969 0 1199 135 6 0 chr5 169002585 169002755 -34082777 + 7SLRNA srpRNA srpRNA 122 292 -28 1814 182 7 3 chr5 169002781 169003089 -34082443 + AluJo SINE Alu 1 309 -3 1294 213 27 23 chr5 169003253 169003554 -34081978 - L1MC4 LINE L1 -411 7631 7330 201 205 0 0 chr5 169003598 169003637 -34081895 + MIR SINE MIR 89 127 -81 219 242 95 63 chr5 169003648 169003743 -34081789 + L2 LINE L2 2962 3059 -213 374 257 9 19 chr5 169003777 169003882 -34081650 + L2 LINE L2 3158 3261 -11 260 300 20 30 chr5 169004107 169004207 -34081325 - MIR3 SINE MIR -15 193 95 2265 99 7 0 chr5 169004246 169004538 -34080994 + AluSq SINE Alu 1 294 -19 452 262 40 0 chr5 169004785 169004911 -34080621 - MIR SINE MIR -69 193 63 704 121 0 0 chr5 169004912 169005011 -34080521 + HY3 scRNA scRNA 1 99 -2 182 224 35 69 chr5 169005039 169005097 -34080435 - MIR SINE MIR -187 75 20 466 303 86 9 chr5 169005240 169005461 -34080071 + MIR SINE MIR 5 242 -20 787 188 0 0 chr5 169006254 169006408 -34079124 - MER53 DNA DNA 0 189 36 303 292 22 0 chr5 169006499 169006588 -34078944 + L2 LINE L2 3182 3272 0 217 130 152 0 chr5 169007018 169007064 -34078468 + L2 LINE L2 3261 3313 0 211 214 0 0 chr5 169007069 169007111 -34078421 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 213 339 54 0 chr5 169007142 169007254 -34078278 + MIR SINE MIR 132 249 -13 1787 170 7 0 chr5 169007368 169007657 -34077875 + AluJb SINE Alu 1 291 -21 654 327 91 14 chr5 169007671 169008182 -34077350 + L2 LINE L2 2766 3313 0 321 93 0 0 chr5 169008234 169008277 -34077255 + MADE1 DNA Mariner 2 44 -36 209 298 0 0 chr5 169008279 169008336 -34077196 + L3 LINE CR1 1520 1576 -1 414 0 0 0 chr5 169008839 169008885 -34076647 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 1904 163 0 7 chr5 169008885 169009174 -34076358 - AluJo SINE Alu -25 287 1 243 297 27 0 chr5 169009528 169009602 -34075930 + L2 LINE L2 3231 3306 -7 261 57 0 0 chr5 169009754 169009789 -34075743 + (CA)n Simple_repeat Simple_repeat 2 36 0 338 298 16 8 chr5 169009814 169009935 -34075597 + MIR SINE MIR 104 225 -37 183 292 0 0 chr5 169010004 169010052 -34075480 + L2 LINE L2 3014 3061 -252 223 208 38 0 chr5 169010562 169010615 -34074917 + MIR3 SINE MIR 117 171 -37 463 238 48 36 chr5 169010619 169010787 -34074745 + MIR SINE MIR 2 171 -91 730 293 33 0 chr5 169011270 169011482 -34074050 + MIR SINE MIR 4 222 -40 228 268 0 0 chr5 169011561 169011617 -34073915 + MIR SINE MIR 95 150 -112 903 127 0 0 chr5 169011619 169011737 -34073795 + FLAM_C SINE Alu 1 118 -25 28 0 0 0 chr5 169011737 169011765 -34073767 + AT_rich Low_complexity Low_complexity 1 28 0 1474 195 89 0 chr5 169011776 169012058 -34073474 + AluJo SINE Alu 1 307 -5 24 67 0 0 chr5 169013678 169013723 -34071809 + AT_rich Low_complexity Low_complexity 1 45 0 229 325 52 0 chr5 169014814 169014891 -34070641 - MER5A DNA MER1_type 0 189 109 834 162 7 0 chr5 169014982 169015124 -34070408 + FLAM_C SINE Alu 1 143 0 2250 250 80 34 chr5 169015125 169015399 -34070133 - L1ME3A LINE L1 -16 6137 5877 2337 48 0 4 chr5 169015399 169015702 -34069830 - AluY SINE Alu 0 319 18 2250 250 80 34 chr5 169015702 169016315 -34069217 - L1ME3A LINE L1 -276 5877 5208 3833 94 26 111 chr5 169016315 169016508 -34069024 + Tigger3b DNA MER2_type 1 209 -2820 2610 64 0 13 chr5 169016508 169016822 -34068710 + AluSg SINE Alu 1 310 0 279 0 0 0 chr5 169016823 169016854 -34068678 + (TA)n Simple_repeat Simple_repeat 2 32 0 3833 94 26 111 chr5 169016854 169017460 -34068072 + Tigger3b DNA MER2_type 208 732 -500 638 186 0 25 chr5 169017469 169017587 -34067945 + AluJo SINE Alu 122 236 -76 1904 129 28 17 chr5 169017610 169018027 -34067505 + Tigger3b DNA MER2_type 703 1231 0 2407 93 7 0 chr5 169018065 169018366 -34067166 - AluSq SINE Alu -10 303 1 1191 258 17 82 chr5 169018371 169018797 -34066735 - L1ME3A LINE L1 -947 5182 4797 2024 147 0 16 chr5 169018797 169019104 -34066428 - AluSx SINE Alu -10 302 1 1191 258 17 82 chr5 169019104 169019216 -34066316 - L1ME3A LINE L1 -1332 4797 4679 246 289 85 44 chr5 169019217 169019339 -34066193 - L1ME3A LINE L1 -5000 1119 1003 2098 134 7 0 chr5 169019339 169019638 -34065894 - AluSx SINE Alu -11 301 1 246 289 85 44 chr5 169019638 169019833 -34065699 - L1ME3A LINE L1 -5116 1003 789 233 224 0 0 chr5 169020520 169020569 -34064963 - L1ME LINE L1 -372 5792 5744 262 253 0 0 chr5 169020575 169020666 -34064866 + (TA)n Simple_repeat Simple_repeat 1 91 0 459 0 0 0 chr5 169021485 169021536 -34063996 + (TTATG)n Simple_repeat Simple_repeat 2 52 0 2135 119 0 0 chr5 169021539 169021824 -34063708 - AluSx SINE Alu -27 285 1 886 263 94 55 chr5 169021833 169022194 -34063338 - MER57A LTR ERV1 -15 388 14 2204 106 0 0 chr5 169022428 169022710 -34062822 + AluSx SINE Alu 1 282 -30 270 0 0 0 chr5 169022713 169022743 -34062789 + (TAA)n Simple_repeat Simple_repeat 2 31 0 534 283 64 11 chr5 169022794 169023036 -34062496 - L1MC4a LINE L1 -317 5804 5637 431 107 13 0 chr5 169023673 169023748 -34061784 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 276 313 70 39 chr5 169023770 169023898 -34061634 - MIR SINE MIR -48 214 83 544 159 0 11 chr5 169024031 169024258 -34061274 - FLAM_C SINE Alu 0 254 29 732 260 7 90 chr5 169024258 169024447 -34061085 + MER102a DNA MER1_type 77 237 -1180 2350 92 3 0 chr5 169024447 169024740 -34060792 - AluSq SINE Alu -19 294 1 732 260 7 90 chr5 169024740 169024827 -34060705 + MER102a DNA MER1_type 237 330 0 915 143 0 0 chr5 169024860 169024993 -34060539 - FLAM_C SINE Alu 0 133 1 2170 116 3 3 chr5 169025520 169025814 -34059718 - AluSq SINE Alu -19 294 1 1693 174 0 37 chr5 169026117 169026416 -34059116 + AluJb SINE Alu 2 289 -23 26 50 0 0 chr5 169026417 169026457 -34059075 + AT_rich Low_complexity Low_complexity 1 40 0 180 188 0 0 chr5 169027245 169027277 -34058255 - MIR SINE MIR -66 142 111 254 307 0 0 chr5 169027357 169027432 -34058100 - L3 LINE CR1 -98 1479 1405 182 234 0 0 chr5 169027629 169027676 -34057856 - MER5A DNA MER1_type -79 110 64 249 136 0 91 chr5 169027691 169027757 -34057775 - MER5C DNA MER1_type -2 322 263 405 86 35 0 chr5 169027769 169027827 -34057705 - MER41E LTR ERV1 -139 373 314 414 83 0 83 chr5 169027919 169027991 -34057541 + Alu SINE Alu 233 298 -13 533 235 40 7 chr5 169028000 169028149 -34057383 - MER5C DNA MER1_type -170 154 1 307 295 116 9 chr5 169028208 169028320 -34057212 + MIR SINE MIR 19 142 -66 885 127 32 19 chr5 169028743 169028900 -34056632 - MER65C LTR ERV1 0 461 303 971 189 0 0 chr5 169028902 169029066 -34056466 + FRAM SINE Alu 1 164 -12 1673 194 10 10 chr5 169029066 169029370 -34056162 - MER65C LTR ERV1 -157 304 1 229 59 0 0 chr5 169029580 169029614 -34055918 + L1MA4 LINE L1 6261 6294 -6 1868 120 94 0 chr5 169029730 169030006 -34055526 + AluSg SINE Alu 1 302 -8 1980 172 54 70 chr5 169030108 169030626 -34054906 - LTR54 LTR ERV1 0 510 1 2245 125 0 0 chr5 169031635 169031939 -34053593 - AluSx SINE Alu -8 304 1 916 267 36 53 chr5 169032242 169032658 -34052874 - MLT1I LTR MaLR 0 409 1 993 152 0 0 chr5 169032776 169032921 -34052611 + FAM SINE Alu 20 164 -21 23 54 0 0 chr5 169032999 169033036 -34052496 + AT_rich Low_complexity Low_complexity 1 37 0 1069 168 0 88 chr5 169033082 169033308 -34052224 - AluJo SINE Alu -92 220 15 22 0 0 0 chr5 169033321 169033343 -34052189 + AT_rich Low_complexity Low_complexity 1 22 0 726 210 116 64 chr5 169033406 169033534 -34051998 + HsTC2 DNA Tc2 6 126 -1772 1934 170 76 90 chr5 169033534 169033859 -34051673 - LTR54 LTR ERV1 -1 509 192 2197 128 0 3 chr5 169033859 169034171 -34051361 + AluJb SINE Alu 2 312 0 1934 170 76 90 chr5 169034171 169034357 -34051175 - LTR54 LTR ERV1 -318 192 5 726 210 116 64 chr5 169034357 169034495 -34051037 + HsTC2 DNA Tc2 126 286 -1612 401 199 23 30 chr5 169034521 169034652 -34050880 + HsTC2 DNA Tc2 1705 1834 -64 860 230 111 43 chr5 169034701 169035123 -34050409 + L1ME3A LINE L1 2210 2660 -3486 564 242 22 101 chr5 169035128 169035405 -34050127 + L1ME3A LINE L1 2816 3070 -3076 408 269 102 30 chr5 169035407 169035574 -34049958 - LTR33 LTR ERVL -2 519 341 1092 176 21 11 chr5 169035687 169035875 -34049657 + AluJb SINE Alu 108 297 -15 746 236 0 0 chr5 169035879 169036019 -34049513 + FLAM_A SINE Alu 1 140 -2 623 233 0 0 chr5 169036167 169036296 -34049236 - FLAM_A SINE Alu -6 136 8 1196 303 49 14 chr5 169036346 169036882 -34048650 + L1ME3A LINE L1 5272 5836 -334 2272 122 0 0 chr5 169037968 169038279 -34047253 + AluSx SINE Alu 1 311 -1 1936 151 21 0 chr5 169038501 169038792 -34046740 - AluSx SINE Alu -11 301 5 2147 139 0 0 chr5 169038882 169039192 -34046340 + AluJo SINE Alu 1 310 -2 271 336 118 33 chr5 169039435 169040065 -34045467 - L2 LINE L2 -778 2536 1854 602 257 53 16 chr5 169040397 169040584 -34044948 - MER91A DNA MER1_type 0 196 3 1598 121 0 0 chr5 169040777 169040992 -34044540 - AluSg/x SINE Alu -14 296 82 199 250 18 54 chr5 169041538 169041594 -34043938 + MIR3 SINE MIR 139 192 -16 274 198 81 0 chr5 169041649 169041760 -34043772 + (TATAA)n Simple_repeat Simple_repeat 5 124 0 1080 165 6 0 chr5 169041861 169042037 -34043495 - FRAM SINE Alu 0 176 1 2348 84 0 7 chr5 169042205 169042501 -34043031 - AluY SINE Alu -17 294 1 203 368 66 20 chr5 169042593 169042745 -34042787 - L2 LINE L2 -68 3204 3046 259 243 0 56 chr5 169042843 169042950 -34042582 - L2 LINE L2 -444 2870 2770 2279 110 3 0 chr5 169043484 169043793 -34041739 - AluSp SINE Alu -3 310 1 2250 124 0 0 chr5 169043824 169044122 -34041410 + AluSx SINE Alu 1 298 -14 180 358 42 21 chr5 169044122 169044217 -34041315 + L2 LINE L2 2706 2802 -512 252 283 200 44 chr5 169044429 169044634 -34040898 + L2 LINE L2 3027 3263 -9 267 31 0 0 chr5 169044641 169044673 -34040859 + (TA)n Simple_repeat Simple_repeat 2 33 0 2046 129 0 27 chr5 169044673 169044968 -34040564 - AluSx SINE Alu -25 287 1 227 305 13 2 chr5 169045023 169045116 -34040416 - MIR SINE MIR -65 143 58 1842 186 0 10 chr5 169045873 169046179 -34039353 + AluJb SINE Alu 1 303 -9 533 183 21 0 chr5 169046184 169046277 -34039255 - L1MC1 LINE L1 -6 6327 6233 239 304 0 59 chr5 169046356 169046458 -34039074 - MIR SINE MIR -57 205 110 184 258 0 30 chr5 169046756 169046822 -34038710 + L2 LINE L2 3201 3264 -49 207 69 0 0 chr5 169046845 169046874 -34038658 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1803 144 23 27 chr5 169047157 169047456 -34038076 + AluJo SINE Alu 5 302 -10 438 236 24 16 chr5 169047713 169047840 -34037692 - MIR3 SINE MIR -53 155 28 551 207 63 127 chr5 169047874 169048111 -34037421 - MIR SINE MIR -13 249 28 257 276 13 13 chr5 169048965 169049041 -34036491 + MER103 DNA DNA 2 77 -89 429 152 157 168 chr5 169049152 169049262 -34036270 + MER5A DNA MER1_type 1 110 -79 228 35 0 0 chr5 169049262 169049291 -34036241 + (CA)n Simple_repeat Simple_repeat 1 29 0 429 152 157 168 chr5 169049291 169049371 -34036161 + MER5A DNA MER1_type 110 189 0 2374 61 4 0 chr5 169050130 169050410 -34035122 + AluSg1 SINE Alu 20 300 -9 1349 250 50 69 chr5 169051612 169052145 -34033387 - MER31-int LTR ERV1 -1370 6167 4735 1796 163 40 3 chr5 169052259 169052560 -34032972 + AluJb SINE Alu 1 312 0 417 115 103 0 chr5 169052568 169052655 -34032877 - MER31-int LTR ERV1 -1913 3023 2928 1401 205 14 34 chr5 169052704 169052997 -34032535 - AluJo SINE Alu -13 299 13 2951 206 66 98 chr5 169053037 169053217 -34032315 - MER31-int LTR ERV1 -1717 5820 5636 1849 188 0 3 chr5 169053217 169053521 -34032011 - AluJb SINE Alu -9 303 1 2951 206 66 98 chr5 169053521 169053559 -34031973 - MER31-int LTR ERV1 -1901 5636 5598 2260 105 0 0 chr5 169053559 169053853 -34031679 - AluSx SINE Alu -18 294 1 2951 206 66 98 chr5 169053853 169054784 -34030748 - MER31-int LTR ERV1 -1939 5598 4705 2151 130 7 10 chr5 169054784 169055083 -34030449 + AluSx SINE Alu 1 298 -14 2951 206 66 98 chr5 169055083 169055105 -34030427 - MER31-int LTR ERV1 -2832 4705 4684 2193 124 0 3 chr5 169055118 169055417 -34030115 - AluSx SINE Alu -14 298 1 1065 164 0 0 chr5 169055431 169055623 -34029909 + AluJb SINE Alu 134 325 0 706 232 66 43 chr5 169055623 169055927 -34029605 - MER31-int LTR ERV1 -2208 4390 2398 2781 35 3 0 chr5 169055948 169056258 -34029274 - AluY SINE Alu 0 311 1 436 237 66 59 chr5 169056258 169056802 -34028730 - MER31-int LTR ERV1 -2580 2356 1544 247 139 0 0 chr5 169056870 169056906 -34028626 - MER34 LTR ERV1 0 542 507 1450 193 24 27 chr5 169056909 169057034 -34028498 - AluJo SINE Alu -17 295 171 3331 89 20 0 chr5 169057034 169057071 -34028461 - LTR46 LTR ERV1 0 460 425 207 0 0 0 chr5 169057071 169057094 -34028438 + (CA)n Simple_repeat Simple_repeat 2 24 0 3331 89 20 0 chr5 169057094 169057507 -34028025 - LTR46 LTR ERV1 -35 425 1 1450 193 24 27 chr5 169057507 169057677 -34027855 - AluJo SINE Alu -141 171 1 596 224 38 36 chr5 169057677 169057925 -34027607 - L1MB4 LINE L1 -209 5971 5665 251 109 130 0 chr5 169058369 169058415 -34027117 + HERVKC4 LTR ERVK 677 728 -4534 306 177 89 0 chr5 169058892 169058971 -34026561 + L1MCa LINE L1 1979 2064 -4362 * 320 311 0 0 chr5 169058942 169059032 -34026500 - L1MC4 LINE L1 -1339 6703 6614 273 219 0 62 chr5 169059052 169059148 -34026384 - L1MC4 LINE L1 -1339 6703 6614 1832 153 38 0 chr5 169059149 169059437 -34026095 - AluJo SINE Alu -12 300 2 422 278 111 28 chr5 169059479 169059695 -34025837 - MIR SINE MIR -13 249 16 2233 123 0 0 chr5 169060264 169060573 -34024959 - AluSx SINE Alu -3 309 1 1836 157 14 0 chr5 169061254 169061577 -34023955 - AluJb SINE Alu 0 327 1 4277 143 15 26 chr5 169061595 169062262 -34023270 - L1PA16 LINE L1 -9 6157 5497 1873 130 0 14 chr5 169062262 169062539 -34022993 - AluSx SINE Alu -6 306 34 4277 143 15 26 chr5 169062539 169062614 -34022918 - L1PA16 LINE L1 -669 5497 5423 2169 83 28 14 chr5 169062632 169062920 -34022612 - AluSg SINE Alu -18 292 1 252 260 155 0 chr5 169063394 169063488 -34022044 + L1MC/D LINE L1 4903 5009 -1137 3392 20 0 10 chr5 169063533 169063928 -34021604 + L1PA2 LINE L1 5765 6155 0 2114 135 0 6 chr5 169063977 169064317 -34021215 + AluSx SINE Alu 1 312 0 1312 285 88 18 chr5 169064317 169065001 -34020531 + L1MC/D LINE L1 5097 5823 -753 601 264 165 25 chr5 169065099 169065365 -34020167 + Charlie2b DNA MER1_type 7 327 -2535 1016 223 82 5 chr5 169065365 169065585 -34019947 + MER8 DNA MER2_type 1 237 -2 601 264 165 25 chr5 169065585 169065640 -34019892 + Charlie2b DNA MER1_type 327 373 -2489 2080 113 4 0 chr5 169065640 169065915 -34019617 + AluSx SINE Alu 1 276 -36 847 154 0 37 chr5 169065915 169066051 -34019481 - AluJo/FLAM SINE Alu -179 133 3 325 283 179 0 chr5 169066149 169066294 -34019238 + Charlie2b DNA MER1_type 479 649 -2133 455 52 62 10 chr5 169066380 169066477 -34019055 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 1426 149 8 16 chr5 169066583 169066825 -34018707 + AluSx SINE Alu 41 280 -32 815 155 97 32 chr5 169066843 169066998 -34018534 + FRAM SINE Alu 2 166 0 1246 180 140 117 chr5 169067002 169067561 -34017971 + Charlie2 DNA MER1_type 2136 2716 -146 1762 167 7 10 chr5 169067561 169067861 -34017671 + AluJo SINE Alu 1 299 -13 1246 180 140 117 chr5 169067861 169068008 -34017524 + Charlie2 DNA MER1_type 2716 2858 -4 721 183 144 17 chr5 169068015 169068195 -34017337 - MER20 DNA MER1_type 0 219 17 526 305 26 0 chr5 169068289 169068440 -34017092 + MIR SINE MIR 28 182 -80 2930 196 102 29 chr5 169068508 169069226 -34016306 + MER21B LTR ERV1 12 781 -82 1089 145 0 0 chr5 169069314 169069466 -34016066 - AluJb SINE Alu -1 311 160 1118 250 13 33 chr5 169069634 169069717 -34015815 + MER58B DNA MER1_type 48 131 -2289 2258 127 0 0 chr5 169069717 169070016 -34015516 + AluSx SINE Alu 1 299 -13 1118 250 13 33 chr5 169070016 169070092 -34015440 + MER58B DNA MER1_type 131 207 -2213 903 192 79 49 chr5 169070092 169070358 -34015174 + ORSL DNA AcHobo 2 275 0 1118 250 13 33 chr5 169070358 169070497 -34015035 + MER58B DNA MER1_type 207 341 0 312 294 11 0 chr5 169070505 169070597 -34014935 - MIR SINE MIR -67 141 49 246 279 13 0 chr5 169071015 169071094 -34014438 + MER116 DNA Mariner 1 80 0 333 256 60 34 chr5 169071103 169071220 -34014312 - MIR SINE MIR -63 145 26 652 296 121 29 chr5 169071376 169071943 -34013589 + L2 LINE L2 2459 3078 -194 599 252 7 0 chr5 169072144 169072283 -34013249 - MLT1A2 LTR MaLR -230 144 5 334 315 207 14 chr5 169072368 169072590 -34012942 - HAL1 LINE L1 -1208 1299 1035 1623 177 0 0 chr5 169073093 169073341 -34012191 - AluJo SINE Alu -64 248 1 2351 103 0 0 chr5 169073999 169074300 -34011232 - AluSx SINE Alu -11 301 1 754 179 106 72 chr5 169074511 169074718 -34010814 + MER106A DNA MER1_type 22 235 -1 250 314 12 12 chr5 169074754 169074840 -34010692 + MIR SINE MIR 173 258 -4 * 441 330 77 5 chr5 169074829 169075038 -34010494 - MIR SINE MIR -11 251 28 642 245 0 26 chr5 169075743 169075898 -34009634 + MER5A DNA MER1_type 1 151 -38 1221 242 70 62 chr5 169076389 169077045 -34008487 - L1MC5 LINE L1 -30 7931 7271 207 315 31 0 chr5 169077628 169077738 -34007794 - MIR SINE MIR -65 143 42 1090 183 6 0 chr5 169077912 169078087 -34007445 - AluJb SINE Alu -3 309 134 2308 119 0 0 chr5 169078088 169078390 -34007142 - AluSx SINE Alu -10 302 1 416 219 166 15 chr5 169078435 169078589 -34006943 - MIR SINE MIR -42 220 40 232 266 30 75 chr5 169078625 169078764 -34006768 + MIR SINE MIR 77 207 -55 2186 101 3 14 chr5 169078816 169079104 -34006428 + AluSx SINE Alu 11 295 -17 549 304 114 20 chr5 169079125 169079424 -34006108 - L2 LINE L2 -5 3267 2941 1993 159 7 0 chr5 169079424 169079725 -34005807 + AluJo SINE Alu 1 303 -9 187 311 98 0 chr5 169079791 169079923 -34005609 - L2 LINE L2 -457 2857 2713 2263 115 3 0 chr5 169080565 169080869 -34004663 - AluSx SINE Alu -5 307 3 509 312 193 8 chr5 169080871 169081233 -34004299 - L3 LINE CR1 -23 1554 1126 524 268 89 6 chr5 169081333 169081501 -34004031 + MER91B DNA MER1_type 2 183 -7 1983 157 3 3 chr5 169081681 169081980 -34003552 - AluJo SINE Alu -13 299 1 533 280 0 78 chr5 169082010 169082203 -34003329 + Charlie8 DNA MER1_type 152 329 -2088 1560 71 44 22 chr5 169082585 169082810 -34002722 + MER30 DNA MER1_type 1 230 0 490 215 58 131 chr5 169082962 169083156 -34002376 - L1MC5 LINE L1 -26 7935 7765 1736 177 45 0 chr5 169083156 169083444 -34002088 + AluJb SINE Alu 1 301 -11 490 215 58 131 chr5 169083444 169083523 -34002009 - L1MC5 LINE L1 -196 7765 7682 1186 249 25 0 chr5 169083682 169083963 -34001569 + LTR16A LTR ERVL 158 445 -5 2685 65 0 0 chr5 169084223 169084531 -34001001 + AluSq SINE Alu 1 308 -5 1689 179 10 23 chr5 169084547 169084855 -34000677 - AluJo SINE Alu -8 304 1 817 100 46 0 chr5 169085083 169085213 -34000319 - L1MA9 LINE L1 -5 6307 6172 303 275 152 6 chr5 169085216 169085394 -34000138 - L1MC5 LINE L1 -427 7534 7331 239 250 13 26 chr5 169085495 169085571 -33999961 - MIR3 SINE MIR -46 162 88 203 326 29 58 chr5 169085915 169086053 -33999479 + MIR SINE MIR 59 192 -70 596 298 93 15 chr5 169086069 169086274 -33999258 - MIR SINE MIR -1 261 41 2340 93 3 7 chr5 169086275 169086576 -33998956 + AluSq SINE Alu 1 300 -13 291 319 85 0 chr5 169086670 169086811 -33998721 - MIR3 SINE MIR -11 197 45 2268 93 17 0 chr5 169087213 169087513 -33998019 - AluSx SINE Alu -7 305 1 21 0 0 0 chr5 169088006 169088027 -33997505 + AT_rich Low_complexity Low_complexity 1 21 0 544 135 10 10 chr5 169088027 169088123 -33997409 - FLAM_A SINE Alu -5 137 42 273 29 0 0 chr5 169088940 169088974 -33996558 + (CA)n Simple_repeat Simple_repeat 1 34 0 209 211 18 0 chr5 169088996 169089053 -33996479 + (CA)n Simple_repeat Simple_repeat 1 58 0 311 247 41 0 chr5 169091002 169091075 -33994457 - MIR3 SINE MIR -21 187 112 282 291 108 27 chr5 169093157 169093305 -33992227 - MIR3 SINE MIR -29 179 20 234 192 0 19 chr5 169093372 169093424 -33992108 - L2 LINE L2 -1 3312 3262 574 231 39 13 chr5 169093741 169093897 -33991635 + MER117 DNA MER1_type 34 193 -4 230 278 0 0 chr5 169093942 169093996 -33991536 - MIR3 SINE MIR -53 155 102 204 374 54 7 chr5 169096030 169096177 -33989355 + MIR3 SINE MIR 49 202 -6 2305 96 0 3 chr5 169096250 169096543 -33988989 - AluSc SINE Alu -17 292 1 2256 134 0 0 chr5 169096691 169096996 -33988536 - AluJb SINE Alu -7 305 1 642 257 88 0 chr5 169097804 169097975 -33987557 - MIR SINE MIR -60 202 17 387 311 66 20 chr5 169098274 169098470 -33987062 + MLT1K LTR MaLR 187 391 -197 2078 116 41 7 chr5 169098686 169098978 -33986554 - AluSx SINE Alu -8 304 3 3747 175 14 3 chr5 169099193 169099903 -33985629 - L1MB2 LINE L1 -12 6159 5442 2051 128 0 0 chr5 169100189 169100462 -33985070 - AluSx SINE Alu -39 273 1 194 263 35 0 chr5 169100590 169100647 -33984885 + MIR SINE MIR 25 83 -179 414 279 108 54 chr5 169102041 169102374 -33983158 + L2 LINE L2 2942 3292 -21 326 278 42 21 chr5 169102763 169102907 -33982625 - MIR3 SINE MIR -25 183 37 229 251 58 82 chr5 169103614 169103763 -33981769 - MIR SINE MIR -50 212 68 702 292 74 4 chr5 169103968 169104211 -33981321 + MIR SINE MIR 3 262 0 327 295 21 0 chr5 169104215 169104310 -33981222 + MIR SINE MIR 101 197 -65 23 33 0 0 chr5 169105205 169105235 -33980297 + AT_rich Low_complexity Low_complexity 1 30 0 356 250 30 98 chr5 169105288 169105452 -33980080 + MER5A DNA MER1_type 8 160 -29 285 151 0 0 chr5 169106421 169106474 -33979058 + CT-rich Low_complexity Low_complexity 2 54 0 527 165 0 7 chr5 169107159 169107402 -33978130 + AluSx SINE Alu 1 311 0 318 253 234 6 chr5 169107411 169107569 -33977963 - MER117 DNA MER1_type -2 195 2 287 296 0 0 chr5 169108282 169108362 -33977170 - MIR SINE MIR -56 152 84 364 264 61 34 chr5 169109017 169109165 -33976367 + MIR SINE MIR 111 262 0 341 263 10 10 chr5 169109409 169109508 -33976024 - MIR SINE MIR -78 130 32 363 154 0 0 chr5 169109924 169109989 -33975543 + CT-rich Low_complexity Low_complexity 3 67 0 488 275 109 9 chr5 169111004 169111083 -33974449 + L1MB7 LINE L1 5953 6023 -161 1923 79 0 8 chr5 169111083 169111323 -33974209 - AluSx SINE Alu -74 238 1 488 275 109 9 chr5 169111323 169111454 -33974078 + L1MB7 LINE L1 6023 6184 0 195 42 0 0 chr5 169112930 169112954 -33972578 + (CA)n Simple_repeat Simple_repeat 1 24 0 2401 94 16 0 chr5 169113287 169113594 -33971938 - AluSx SINE Alu 0 312 1 1560 187 19 41 chr5 169114267 169114583 -33970949 - AluJo SINE Alu -3 309 1 205 292 46 0 chr5 169114636 169114701 -33970831 + L2 LINE L2 3241 3308 -5 979 244 9 9 chr5 169114839 169115069 -33970463 - MIR SINE MIR 0 262 33 414 291 106 17 chr5 169115174 169115353 -33970179 + MIR3 SINE MIR 3 197 -11 659 319 104 23 chr5 169115648 169116034 -33969498 + L1MC4a LINE L1 5533 5949 -1859 184 196 36 54 chr5 169116832 169116888 -33968644 + L2 LINE L2 3218 3272 0 503 289 147 20 chr5 169117220 169117424 -33968108 + MIR SINE MIR 11 240 -22 213 298 0 0 chr5 169117427 169117484 -33968048 + (CTA)n Simple_repeat Simple_repeat 3 59 0 536 311 86 24 chr5 169117578 169117951 -33967581 - L2 LINE L2 -28 3285 2890 403 288 8 15 chr5 169117971 169118103 -33967429 - MIR SINE MIR -80 182 52 238 284 146 20 chr5 169118746 169118849 -33966683 + MIR SINE MIR 63 179 -29 201 227 23 0 chr5 169119137 169119181 -33966351 - MIR3 SINE MIR -10 198 154 273 233 81 12 chr5 169119357 169119443 -33966089 - MIR SINE MIR -72 136 45 249 319 9 44 chr5 169120071 169120184 -33965348 - MIR3 SINE MIR -35 173 65 233 295 0 0 chr5 169120449 169120510 -33965022 - MIR SINE MIR -127 81 21 197 217 0 0 chr5 169120531 169120577 -33964955 - L2 LINE L2 -1 3312 3267 340 293 38 0 chr5 169120724 169120830 -33964702 - L2 LINE L2 -4 3309 3200 425 287 8 0 chr5 169121362 169121484 -33964048 + MIR SINE MIR 47 169 -93 192 233 0 0 chr5 169121486 169121529 -33964003 + L2 LINE L2 3028 3070 -243 233 190 60 90 chr5 169121561 169121661 -33963871 + L2 LINE L2 3174 3270 -2 282 331 65 0 chr5 169122111 169122235 -33963297 + MIR SINE MIR 127 258 -4 576 316 26 18 chr5 169122241 169122469 -33963063 + MIR SINE MIR 1 230 -32 2176 130 7 0 chr5 169123545 169123853 -33961679 + AluSx SINE Alu 1 310 -2 266 205 217 0 chr5 169123874 169123957 -33961575 + L1MC/D LINE L1 5781 5881 -1927 522 157 9 70 chr5 169124152 169124267 -33961265 + MER5A DNA MER1_type 1 108 -81 350 214 343 0 chr5 169124427 169124567 -33960965 + MIR SINE MIR 70 257 -5 199 229 0 143 chr5 169124984 169125089 -33960443 - L2 LINE L2 -3 3310 3221 1222 198 48 17 chr5 169125375 169125668 -33959864 - L1ME LINE L1 -417 5749 5448 273 281 139 55 chr5 169125675 169125856 -33959676 - L2 LINE L2 -32 3281 3117 1420 183 79 32 chr5 169125856 169126135 -33959397 - AluJb SINE Alu -20 292 1 273 281 139 55 chr5 169126135 169126492 -33959040 - L2 LINE L2 -196 3117 2585 329 317 0 0 chr5 169126912 169126994 -33958538 - MIR3 SINE MIR -50 158 77 240 350 48 0 chr5 169127368 169127471 -33958061 - MIR SINE MIR -15 247 140 1916 114 65 0 chr5 169127504 169127809 -33957723 + AluSx SINE Alu 4 325 0 1742 147 88 59 chr5 169127809 169128183 -33957349 - MLT1B LTR MaLR -5 385 1 284 316 86 0 chr5 169128274 169128391 -33957141 - MIR3 SINE MIR -23 185 59 215 325 71 32 chr5 169128799 169128953 -33956579 + MIR3 SINE MIR 48 207 -1 234 244 24 49 chr5 169129160 169129242 -33956290 + MIR SINE MIR 110 189 -73 1742 169 67 3 chr5 169129297 169129640 -33955892 + MLT1A1 LTR MaLR 1 365 0 293 270 153 0 chr5 169130147 169130284 -33955248 - MER117 DNA MER1_type -3 194 37 761 296 39 14 chr5 169130612 169130892 -33954640 + MLT1K LTR MaLR 302 588 0 367 273 173 27 chr5 169131491 169131641 -33953891 + MLT1J LTR MaLR 331 502 -9 256 306 0 36 chr5 169132500 169132611 -33952921 - MIR SINE MIR -61 147 41 744 275 42 90 chr5 169133283 169133590 -33951942 + L2 LINE L2 2859 3179 -134 833 90 0 30 chr5 169133590 169133633 -33951899 - L1MB3 LINE L1 -1 6182 6139 1797 156 6 78 chr5 169133633 169133819 -33951713 - AluJo SINE Alu -3 309 111 861 101 0 17 chr5 169133819 169133997 -33951535 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 1797 156 6 78 chr5 169133997 169134008 -33951524 - AluJo SINE Alu -201 111 101 982 73 0 12 chr5 169134008 169134172 -33951360 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 1797 156 6 78 chr5 169134172 169134183 -33951349 - AluJo SINE Alu -211 101 91 441 0 0 0 chr5 169134183 169134232 -33951300 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1797 156 6 78 chr5 169134232 169134354 -33951178 - AluJo SINE Alu -221 91 1 833 90 0 30 chr5 169134354 169134443 -33951089 - L1MB3 LINE L1 -44 6139 6054 744 275 42 90 chr5 169134443 169134612 -33950920 + L2 LINE L2 3179 3312 -1 1280 199 53 32 chr5 169135102 169135443 -33950089 + MER96B DNA MER1_type? 62 409 -8 335 217 85 19 chr5 169136058 169136164 -33949368 + L1MB4 LINE L1 6025 6137 -43 1230 184 0 40 chr5 169136168 169136391 -33949141 + AluJb SINE Alu 87 300 -12 243 57 0 0 chr5 169136392 169136427 -33949105 + L1MB3 LINE L1 6142 6176 -7 2206 111 10 0 chr5 169136441 169136739 -33948793 + AluSq SINE Alu 1 301 -12 2240 87 33 17 chr5 169137613 169137913 -33947619 + AluSx SINE Alu 1 305 -7 220 300 112 0 chr5 169138353 169138523 -33947009 + L2 LINE L2 2722 2910 -404 2110 128 14 0 chr5 169138659 169138956 -33946576 - AluSx SINE Alu -11 301 1 295 280 112 0 chr5 169138999 169139106 -33946426 + L2 LINE L2 3181 3299 -14 454 283 0 9 chr5 169139980 169140093 -33945439 - MIR SINE MIR -65 143 32 279 263 158 11 chr5 169140105 169140200 -33945332 + MIR SINE MIR 21 129 -79 466 258 166 7 chr5 169140430 169140581 -33944951 + MER5A DNA MER1_type 9 183 -6 272 364 61 12 chr5 169140615 169140780 -33944752 + MIR SINE MIR 84 256 -6 403 260 220 7 chr5 169141308 169141458 -33944074 + MIR SINE MIR 79 260 -2 367 295 125 28 chr5 169141578 169142051 -33943481 + L2 LINE L2 2579 3099 -173 283 161 214 0 chr5 169142138 169142194 -33943338 + L2 LINE L2 3232 3299 -14 472 296 101 0 chr5 169142754 169142913 -33942619 - MIR SINE MIR -86 176 2 2300 112 6 13 chr5 169143349 169143663 -33941869 + AluSx SINE Alu 1 312 0 448 295 101 24 chr5 169144444 169144651 -33940881 - MIR SINE MIR 0 262 40 477 279 15 15 chr5 169145151 169145287 -33940245 + MIR SINE MIR 17 152 -110 1495 155 71 115 chr5 169145304 169145430 -33940102 - Charlie4a DNA MER1_type -1454 507 377 2258 97 4 0 chr5 169145430 169145709 -33939823 - AluSx SINE Alu -32 280 1 1495 155 71 115 chr5 169145709 169146078 -33939454 - Charlie4a DNA MER1_type -1584 377 34 1139 290 114 38 chr5 169146453 169147304 -33938228 + L2 LINE L2 2291 3209 -104 309 230 167 32 chr5 169147345 169147471 -33938061 - MIR SINE MIR -14 248 106 212 328 15 0 chr5 169147902 169147969 -33937563 - L3 LINE CR1 -2 1575 1508 566 271 0 24 chr5 169147991 169148161 -33937371 - MIR SINE MIR -90 172 7 304 200 63 21 chr5 169148217 169148312 -33937220 - MIR3 SINE MIR -7 201 103 270 0 0 0 chr5 169148793 169148823 -33936709 + (TG)n Simple_repeat Simple_repeat 1 30 0 279 385 51 26 chr5 169148890 169149046 -33936486 + MIR3 SINE MIR 46 205 -3 934 190 56 42 chr5 169149212 169149428 -33936104 - MER58A DNA MER1_type -2 222 4 282 230 133 18 chr5 169150362 169150475 -33935057 + L3 LINE CR1 1253 1378 -199 300 27 0 0 chr5 169150572 169150609 -33934923 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 290 259 25 0 chr5 169150666 169150747 -33934785 - MIR SINE MIR -74 188 106 1896 143 23 33 chr5 169152041 169152341 -33933191 - AluSx SINE Alu -15 297 1 401 241 43 21 chr5 169152367 169152508 -33933024 + MER5A DNA MER1_type 14 157 -32 796 234 71 5 chr5 169153162 169153359 -33932173 - MIR SINE MIR -16 246 37 728 231 35 20 chr5 169153625 169153824 -33931708 + MIR SINE MIR 49 250 -12 345 276 8 39 chr5 169153855 169153982 -33931550 - MIR SINE MIR -56 206 84 399 297 44 39 chr5 169154121 169154256 -33931276 - MER117 DNA MER1_type -1 196 58 6983 47 0 0 chr5 169154256 169155463 -33930069 - L1PA5 LINE L1 -3 6151 4951 399 297 44 39 chr5 169155463 169155509 -33930023 - MER117 DNA MER1_type -139 58 14 873 273 78 31 chr5 169155990 169156423 -33929109 + MLT1K LTR MaLR 97 580 -8 2009 132 9 41 chr5 169156811 169156952 -33928580 + AluJb SINE Alu 1 145 -167 2256 111 0 10 chr5 169156952 169157258 -33928274 + AluSx SINE Alu 1 303 -9 2009 132 9 41 chr5 169157258 169157435 -33928097 + AluJb SINE Alu 145 309 -3 440 280 225 10 chr5 169157884 169158084 -33927448 - MIR SINE MIR -14 248 6 229 253 38 38 chr5 169158091 169158170 -33927362 - MIR3 SINE MIR -21 187 109 219 268 165 55 chr5 169158324 169158451 -33927081 - L2 LINE L2 -20 3252 3112 246 329 146 49 chr5 169158454 169158481 -33927051 - L2 LINE L2 -411 2903 2880 2685 55 0 0 chr5 169158481 169158791 -33926741 + AluY SINE Alu 1 310 -1 246 329 146 49 chr5 169158791 169159292 -33926240 - L2 LINE L2 -434 2880 2324 350 307 45 28 chr5 169159575 169159751 -33925781 - MIR3 SINE MIR -8 200 22 360 270 70 9 chr5 169159851 169159966 -33925566 - MIR SINE MIR -55 207 86 198 71 0 0 chr5 169160237 169160265 -33925267 + (TC)n Simple_repeat Simple_repeat 1 28 0 483 265 41 27 chr5 169161434 169161581 -33923951 + MER117 DNA MER1_type 2 150 -47 356 288 106 0 chr5 169161842 169161974 -33923558 - MIR SINE MIR -70 192 47 307 291 44 51 chr5 169162020 169162124 -33923408 - L3 LINE CR1 -91 1486 1382 2432 89 0 3 chr5 169162124 169162426 -33923106 - AluSx SINE Alu -11 301 1 307 291 44 51 chr5 169162426 169162479 -33923053 - L3 LINE CR1 -195 1382 1330 401 299 22 7 chr5 169162802 169162939 -33922593 - MIR3 SINE MIR -8 200 62 307 292 139 7 chr5 169163762 169163899 -33921633 + L2 LINE L2 3159 3313 0 275 256 95 54 chr5 169164649 169164817 -33920715 + L3 LINE CR1 1261 1435 -142 432 0 0 0 chr5 169165236 169165284 -33920248 + (TG)n Simple_repeat Simple_repeat 1 48 0 378 0 0 0 chr5 169165383 169165425 -33920107 + (TG)n Simple_repeat Simple_repeat 1 42 0 387 0 0 0 chr5 169165520 169165563 -33919969 + (TG)n Simple_repeat Simple_repeat 2 44 0 210 245 0 0 chr5 169166555 169166604 -33918928 - MIR SINE MIR -161 101 53 29 0 0 0 chr5 169166954 169166983 -33918549 + AT_rich Low_complexity Low_complexity 1 29 0 439 265 29 37 chr5 169167032 169167168 -33918364 - MIR3 SINE MIR -70 138 4 419 275 22 7 chr5 169167714 169167852 -33917680 + MER117 DNA MER1_type 19 158 -39 201 74 0 0 chr5 169168743 169168770 -33916762 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 259 308 21 49 chr5 169168884 169169027 -33916505 - MIR SINE MIR -11 251 113 2087 177 16 0 chr5 169170541 169170925 -33914607 + MLT1B LTR MaLR 1 390 0 256 196 163 11 chr5 169171321 169171413 -33914119 + MIR SINE MIR 103 208 -54 518 262 0 28 chr5 169171436 169171581 -33913951 - MER63 DNA MER1_type -69 767 1 968 278 89 24 chr5 169171845 169172227 -33913305 + MER115 DNA AcHobo 8 414 -279 377 233 53 61 chr5 169172475 169172496 -33913036 - MIR SINE MIR -52 210 190 1533 142 81 0 chr5 169172496 169172742 -33912790 - AluJo SINE Alu -5 307 42 377 233 53 61 chr5 169172742 169172887 -33912645 - MIR SINE MIR -72 190 38 27 0 0 0 chr5 169173174 169173201 -33912331 + AT_rich Low_complexity Low_complexity 1 27 0 188 195 23 126 chr5 169173267 169173309 -33912223 - MIR3 SINE MIR -22 186 156 1833 194 133 2 chr5 169173309 169173752 -33911780 + MLT1D LTR MaLR 5 505 0 188 195 23 126 chr5 169173752 169173796 -33911736 - MIR3 SINE MIR -52 156 109 2956 114 0 0 chr5 169173989 169174393 -33911139 + Charlie3 DNA MER1_type 4 407 -2303 2001 134 0 56 chr5 169174393 169174533 -33910999 + AluSx SINE Alu 1 147 -165 1577 98 0 0 chr5 169174533 169174727 -33910805 + AluSq SINE Alu 2 195 -118 2001 134 0 56 chr5 169174727 169174906 -33910626 + AluSx SINE Alu 147 302 -10 970 186 6 0 chr5 169174906 169175062 -33910470 + AluJb SINE Alu 134 290 -22 339 67 0 0 chr5 169175062 169175107 -33910425 + Charlie3 DNA MER1_type 398 442 -2268 * 3407 62 4 43 chr5 169175101 169175585 -33909947 + Charlie3 DNA MER1_type 2242 2706 -4 204 297 163 40 chr5 169175597 169175799 -33909733 + L3 LINE CR1 1336 1562 -15 358 313 56 25 chr5 169176788 169176986 -33908546 + MIR SINE MIR 44 247 -15 435 229 42 54 chr5 169177346 169177464 -33908068 - MIR SINE MIR 0 262 145 2324 54 0 11 chr5 169177464 169177740 -33907792 - AluY SINE Alu -8 303 31 435 229 42 54 chr5 169177740 169177787 -33907745 - MIR SINE MIR -117 145 99 973 158 12 29 chr5 169178042 169178213 -33907319 + LTR58 LTR ERV1 1 168 -511 262 195 46 0 chr5 169178508 169178595 -33906937 + MER113 DNA MER1_type? 24 114 -407 700 164 8 0 chr5 169178851 169178973 -33906559 - AluSq/x SINE Alu -189 124 2 1801 191 38 78 chr5 169178989 169179492 -33906040 + L1ME1 LINE L1 5517 5999 -167 284 377 0 0 chr5 169179824 169179930 -33905602 + MIR SINE MIR 37 142 -66 332 340 78 33 chr5 169179970 169180214 -33905318 + L1MC4a LINE L1 5039 5293 -853 2246 120 0 0 chr5 169180214 169180513 -33905019 + AluSx SINE Alu 1 299 -13 1233 286 60 25 chr5 169180533 169181088 -33904444 + L1MC4a LINE L1 5312 5885 -1923 2069 138 10 0 chr5 169184264 169184560 -33900972 + AluSx SINE Alu 12 310 -2 429 202 43 0 chr5 169184560 169184654 -33900878 - L1ME3A LINE L1 -321 5849 5752 1734 257 108 26 chr5 169184659 169185332 -33900200 - L1M4 LINE L1 -2596 3786 3170 2246 93 0 0 chr5 169185332 169185610 -33899922 + AluY SINE Alu 1 278 -33 423 0 0 0 chr5 169185610 169185657 -33899875 + (CA)n Simple_repeat Simple_repeat 1 47 0 1734 257 108 26 chr5 169185657 169185757 -33899775 - L1M4 LINE L1 -3212 3170 3080 2586 77 0 0 chr5 169185757 169186069 -33899463 - AluSx SINE Alu 0 312 1 1734 257 108 26 chr5 169186069 169186548 -33898984 - L1M4 LINE L1 -3302 3080 2429 1704 152 0 63 chr5 169186569 169186722 -33898810 - AluJb SINE Alu -23 289 128 257 0 30 0 chr5 169186722 169186755 -33898777 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2012 141 0 3 chr5 169186755 169187038 -33898494 - AluSx SINE Alu -30 282 1 1704 152 0 63 chr5 169187038 169187185 -33898347 - AluJb SINE Alu -182 130 7 1212 138 5 21 chr5 169187195 169187212 -33898320 - AluSp SINE Alu -8 305 289 243 0 0 0 chr5 169187212 169187239 -33898293 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1212 138 5 21 chr5 169187239 169187393 -33898139 - AluSp SINE Alu -24 289 135 1954 170 3 3 chr5 169187393 169187699 -33897833 - AluJo SINE Alu -6 306 1 1212 138 5 21 chr5 169187699 169187715 -33897817 - AluSp SINE Alu -178 135 120 476 280 133 7 chr5 169187716 169187866 -33897666 - L1M4 LINE L1 -3947 2437 2269 199 316 144 0 chr5 169187967 169188106 -33897426 + L2 LINE L2 2902 3060 -212 253 340 128 0 chr5 169188251 169188454 -33897078 + L3 LINE CR1 1159 1387 -190 276 387 0 0 chr5 169188572 169188678 -33896854 + MIR SINE MIR 37 142 -66 265 119 0 0 chr5 169188945 169188987 -33896545 + Alu SINE Alu 253 294 -8 216 0 0 0 chr5 169188989 169189013 -33896519 + (TA)n Simple_repeat Simple_repeat 2 25 0 910 138 15 0 chr5 169189013 169189143 -33896389 - AluSq/x SINE Alu -180 132 1 1660 178 13 20 chr5 169189145 169189448 -33896084 - AluJo SINE Alu -5 307 7 875 274 29 4 chr5 169189456 169189701 -33895831 - MIR SINE MIR -8 254 4 204 350 52 0 chr5 169190615 169190712 -33894820 + L2 LINE L2 3171 3272 0 314 264 44 0 chr5 169190949 169191040 -33894492 + MER94 DNA DNA 11 105 -29 671 313 39 0 chr5 169191046 169191276 -33894256 - MIR SINE MIR -13 249 11 183 300 164 9 chr5 169191322 169191432 -33894100 + MIR SINE MIR 20 146 -116 335 321 142 23 chr5 169191490 169191792 -33893740 - L2 LINE L2 -36 3236 2899 289 298 68 19 chr5 169192036 169192197 -33893335 - L2 LINE L2 -454 2860 2692 225 265 87 0 chr5 169192851 169192941 -33892591 + MIR SINE MIR 85 192 -70 494 300 45 9 chr5 169193070 169193290 -33892242 - MER113 DNA MER1_type? -81 440 213 374 290 16 43 chr5 169193328 169193530 -33892002 + L1ME4a LINE L1 5566 5766 -355 2781 155 37 21 chr5 169193530 169194065 -33891467 + LTR10A LTR ERV1 1 544 -65 330 321 11 80 chr5 169194091 169194353 -33891179 + L1ME4a LINE L1 5762 6005 -116 319 198 21 52 chr5 169195286 169195382 -33890150 + MIR SINE MIR 24 116 -92 446 133 0 13 chr5 169195423 169195498 -33890034 + LTR24B LTR ERV1 4 77 -499 473 267 60 18 chr5 169195609 169195859 -33889673 + LTR24B LTR ERV1 178 538 -38 396 278 32 0 chr5 169195900 169196026 -33889506 + MIR SINE MIR 128 257 -5 221 290 108 32 chr5 169196075 169196168 -33889364 - MIR SINE MIR -76 132 33 286 223 20 26 chr5 169196869 169196964 -33888568 + CT-rich Low_complexity Low_complexity 2 151 0 214 273 36 0 chr5 169197329 169197384 -33888148 - MIR SINE MIR -62 146 90 421 287 22 7 chr5 169198388 169198524 -33887008 - MIR3 SINE MIR -14 194 57 255 228 25 89 chr5 169199060 169199139 -33886393 - MIR3 SINE MIR -19 189 116 371 269 17 8 chr5 169199730 169199849 -33885683 - MIR SINE MIR -131 131 12 258 284 0 25 chr5 169199877 169199958 -33885574 - MIR SINE MIR -62 200 122 2403 91 13 0 chr5 169199958 169200267 -33885265 + AluSp SINE Alu 1 313 0 281 189 126 32 chr5 169200478 169200573 -33884959 - MIR SINE MIR -71 137 33 315 0 0 0 chr5 169201172 169201207 -33884325 + (CA)n Simple_repeat Simple_repeat 1 35 0 268 315 24 24 chr5 169201496 169201623 -33883909 - MIR3 SINE MIR 0 208 82 650 262 104 9 chr5 169202702 169203065 -33882467 + MLT1K LTR MaLR 144 571 -17 315 312 26 32 chr5 169203385 169203539 -33881993 - MIR3 SINE MIR -15 193 41 385 300 147 0 chr5 169206952 169207142 -33878390 + MIR SINE MIR 45 262 0 444 293 49 18 chr5 169209787 169209951 -33875581 - MIR3 SINE MIR -3 205 37 197 232 0 36 chr5 169210215 169210271 -33875261 - MIR SINE MIR -78 130 77 1006 192 0 0 chr5 169212113 169212285 -33873247 - FRAM SINE Alu -10 166 1 184 200 0 0 chr5 169212295 169212330 -33873202 - MIR SINE MIR -154 108 74 491 247 90 30 chr5 169212898 169213064 -33872468 - MIR SINE MIR -74 188 13 906 190 0 0 chr5 169213106 169213269 -33872263 + FRAM SINE Alu 1 163 -3 1010 209 138 45 chr5 169213410 169213735 -33871797 + L1ME1 LINE L1 5722 6066 -112 234 0 0 0 chr5 169213735 169213761 -33871771 + (TG)n Simple_repeat Simple_repeat 2 27 0 1010 209 138 45 chr5 169213761 169213886 -33871646 + L1ME1 LINE L1 6066 6178 0 1830 171 13 16 chr5 169213893 169214198 -33871334 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr5 169214200 169214234 -33871298 + (CA)n Simple_repeat Simple_repeat 2 35 0 193 267 0 0 chr5 169214631 169214676 -33870856 - L2 LINE L2 -13 3259 3215 2404 105 0 0 chr5 169215650 169215955 -33869577 + AluSg SINE Alu 2 306 -4 333 317 84 78 chr5 169216610 169216944 -33868588 + L2 LINE L2 2836 3171 -101 1211 233 33 7 chr5 169218920 169219220 -33866312 - MER113 DNA MER1_type? -133 388 81 646 247 129 77 chr5 169219224 169219772 -33865760 + L2 LINE L2 2716 3295 -18 225 256 23 23 chr5 169219774 169219860 -33865672 - MER113 DNA MER1_type? -433 88 3 307 186 283 26 chr5 169219862 169219975 -33865557 - MIR3 SINE MIR -48 160 19 201 291 0 0 chr5 169220007 169220062 -33865470 + G-rich Low_complexity Low_complexity 5 59 0 413 207 107 7 chr5 169220211 169220351 -33865181 - MIR3 SINE MIR -19 189 36 349 244 37 0 chr5 169220651 169220733 -33864799 + L2 LINE L2 3178 3262 -51 275 323 5 54 chr5 169221303 169221489 -33864043 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 683 257 20 0 chr5 169222214 169222362 -33863170 - L2 LINE L2 0 3313 3163 795 263 107 9 chr5 169222392 169222616 -33862916 - MIR SINE MIR -13 249 4 424 292 23 8 chr5 169222619 169222749 -33862783 + MIR SINE MIR 61 192 -70 294 268 89 83 chr5 169223136 169223293 -33862239 + MIR3 SINE MIR 38 195 -13 336 294 35 53 chr5 169225342 169225512 -33860020 + MIR3 SINE MIR 29 195 -13 296 265 0 0 chr5 169225857 169225925 -33859607 - MIR SINE MIR -115 147 80 525 258 5 0 chr5 169225936 169226145 -33859387 + (CAGAGA)n Simple_repeat Simple_repeat 1 210 0 226 220 85 93 chr5 169227431 169227549 -33857983 + MIR3 SINE MIR 77 193 -15 406 225 22 0 chr5 169227705 169227794 -33857738 + MIR3 SINE MIR 67 157 -51 2337 85 0 0 chr5 169227795 169228090 -33857442 + AluSc SINE Alu 1 295 -14 761 281 57 4 chr5 169229437 169229665 -33855867 - MIR SINE MIR -21 241 2 280 254 9 123 chr5 169230168 169230282 -33855250 - MIR3 SINE MIR -7 201 101 202 321 161 36 chr5 169230520 169230632 -33854900 - MIR3 SINE MIR -79 129 4 405 278 83 6 chr5 169230651 169230719 -33854813 + MIR3 SINE MIR 20 81 -127 4058 148 46 6 chr5 169230719 169231396 -33854136 - MER44D DNA MER2_type -1 704 1 405 278 83 6 chr5 169231396 169231496 -33854036 + MIR3 SINE MIR 81 201 -7 196 298 165 0 chr5 169232275 169232396 -33853136 + L2 LINE L2 2636 2776 -538 362 153 0 0 chr5 169233059 169233118 -33852414 + Tigger2 DNA MER2_type 1 59 -2659 1858 156 74 13 chr5 169233139 169233529 -33852003 + Tigger2 DNA MER2_type 2305 2718 0 609 286 62 0 chr5 169233546 169233724 -33851808 - MIR SINE MIR -43 219 31 997 79 146 12 chr5 169233832 169233996 -33851536 + AluSq SINE Alu 121 306 -7 314 283 28 102 chr5 169234171 169234348 -33851184 - L3 LINE CR1 -112 1465 1302 732 267 5 24 chr5 169234434 169234640 -33850892 - MIR SINE MIR -35 227 26 1024 94 0 88 chr5 169234641 169234811 -33850721 - FRAM SINE Alu -14 162 8 221 331 117 14 chr5 169234919 169235064 -33850468 - MIR3 SINE MIR -4 204 45 544 202 98 38 chr5 169235800 169235978 -33849554 + MIR SINE MIR 59 255 -7 201 310 56 0 chr5 169236196 169236267 -33849265 - MIR SINE MIR -84 124 50 213 216 0 0 chr5 169236812 169236849 -33848683 + L2 LINE L2 3218 3254 -18 701 170 22 0 chr5 169237386 169237521 -33848011 - MER45A DNA AcHobo 0 178 41 312 161 0 0 chr5 169237587 169237649 -33847883 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 498 309 13 20 chr5 169238325 169238477 -33847055 + MIR3 SINE MIR 42 192 -16 191 340 0 43 chr5 169239080 169239174 -33846358 - L3 LINE CR1 -138 1439 1350 387 295 16 25 chr5 169239317 169239439 -33846093 - MIR3 SINE MIR -6 202 82 441 222 111 9 chr5 169239562 169239670 -33845862 + MIR SINE MIR 32 150 -112 2293 92 0 10 chr5 169239672 169239977 -33845555 + AluSx SINE Alu 1 302 -10 210 37 0 0 chr5 169240020 169240047 -33845485 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1774 87 4 0 chr5 169240072 169240302 -33845230 - AluSx SINE Alu -81 231 1 245 307 13 13 chr5 169240313 169240388 -33845144 - L2 LINE L2 -4 3309 3235 330 324 18 17 chr5 169241008 169241144 -33844388 - MIR SINE MIR -69 139 2 218 301 41 65 chr5 169241149 169241272 -33844260 - MIR SINE MIR -72 136 17 209 351 103 18 chr5 169241355 169241520 -33844012 + L3b LINE CR1 1278 1456 -127 454 301 67 11 chr5 169241546 169241745 -33843787 + MIR SINE MIR 37 251 -11 605 276 53 22 chr5 169242389 169242633 -33842899 + MIR SINE MIR 7 250 -12 262 367 28 0 chr5 169242621 169242730 -33842802 - L2 LINE L2 -505 2809 2698 * 207 0 0 0 chr5 169243393 169243416 -33842116 + (T)n Simple_repeat Simple_repeat 1 23 0 207 127 7 2 chr5 169244335 169244370 -33841162 + MIR SINE MIR 106 197 -11 447 313 96 17 chr5 169244408 169244638 -33840894 - L2 LINE L2 -1 3271 3024 187 228 64 93 chr5 169244642 169244751 -33840781 - MIR SINE MIR -24 184 80 462 200 70 0 chr5 169244834 169244934 -33840598 - MIR SINE MIR -62 146 40 2283 98 3 0 chr5 169245067 169245373 -33840159 - AluSg SINE Alu -3 307 1 185 346 10 48 chr5 169245569 169245673 -33839859 - MIR SINE MIR -94 168 69 301 326 152 0 chr5 169246151 169246289 -33839243 + MIR3 SINE MIR 18 176 -32 500 243 57 21 chr5 169246615 169246803 -33838729 + MIR SINE MIR 10 201 -61 537 279 70 29 chr5 169247244 169247416 -33838116 + MIR SINE MIR 17 195 -67 2290 91 3 0 chr5 169247480 169247777 -33837755 + AluSp SINE Alu 1 298 -15 372 320 97 34 chr5 169247812 169247987 -33837545 - MIR3 SINE MIR -3 205 20 337 292 81 17 chr5 169248282 169248444 -33837088 - MIR3 SINE MIR -67 141 9 563 294 151 9 chr5 169248936 169249488 -33836044 - L2 LINE L2 0 3313 2614 255 325 25 42 chr5 169250031 169250151 -33835381 - MIR SINE MIR -61 147 30 206 286 187 0 chr5 169250564 169250655 -33834877 - MIR SINE MIR -72 136 29 2448 67 3 0 chr5 169250920 169251232 -33834300 + AluSq SINE Alu 1 313 0 775 289 10 10 chr5 169251234 169251438 -33834094 + MIR SINE MIR 59 262 0 450 322 174 40 chr5 169251952 169252325 -33833207 + L2 LINE L2 2850 3272 0 481 330 173 25 chr5 169252390 169252829 -33832703 - L3 LINE CR1 -10 1567 1064 791 226 0 6 chr5 169253189 169253357 -33832175 + MER45A DNA AcHobo 1 167 -11 1020 222 69 25 chr5 169253809 169254169 -33831363 + L1MC5 LINE L1 7555 7930 -31 210 37 0 0 chr5 169254235 169254262 -33831270 + (CA)n Simple_repeat Simple_repeat 1 27 0 32 0 0 0 chr5 169255061 169255093 -33830439 + GC_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr5 169255127 169255164 -33830368 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 169255199 169255220 -33830312 + GC_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr5 169255274 169255332 -33830200 + GC_rich Low_complexity Low_complexity 1 58 0 241 333 99 18 chr5 169255612 169255723 -33829809 - MIR3 SINE MIR -52 156 37 199 283 33 0 chr5 169255828 169255888 -33829644 + MIR SINE MIR 73 134 -74 913 252 35 20 chr5 169256593 169256847 -33828685 - MIR SINE MIR 0 262 5 1055 296 100 9 chr5 169258041 169258575 -33826957 + L2 LINE L2 2732 3312 -1 268 213 111 0 chr5 169259145 169259235 -33826297 - MIR3 SINE MIR -15 193 93 2311 80 0 3 chr5 169259430 169259731 -33825801 - AluY SINE Alu -11 300 1 288 308 195 31 chr5 169259853 169260048 -33825484 + MIR SINE MIR 17 243 -19 219 298 122 65 chr5 169260130 169260409 -33825123 + L2 LINE L2 2945 3239 -33 728 280 14 23 chr5 169260409 169260623 -33824909 - MIR SINE MIR -3 259 48 211 236 24 134 chr5 169261306 169261433 -33824099 - L2 LINE L2 0 3272 3160 458 327 70 12 chr5 169261460 169261717 -33823815 + L2 LINE L2 2922 3193 -120 441 281 128 10 chr5 169261868 169262071 -33823461 - L2 LINE L2 -713 2601 2375 271 279 135 19 chr5 169262072 169262176 -33823356 - L2 LINE L2 -1 3312 3197 202 276 69 0 chr5 169262175 169262262 -33823270 - MIR SINE MIR -78 130 38 * 280 336 120 32 chr5 169262336 169262553 -33822979 + L3 LINE CR1 1128 1363 -214 974 175 148 6 chr5 169262607 169262790 -33822742 + MER3 DNA MER1_type 1 209 0 2347 87 0 0 chr5 169262872 169263172 -33822360 - AluSq SINE Alu -13 300 1 457 325 20 35 chr5 169263238 169263435 -33822097 - MIR SINE MIR -49 213 20 210 248 295 9 chr5 169263820 169263925 -33821607 - MIR3 SINE MIR -59 149 15 206 414 48 0 chr5 169264050 169264154 -33821378 - MIR SINE MIR -56 152 44 204 260 96 27 chr5 169264772 169264845 -33820687 - MIR SINE MIR -81 127 50 287 290 142 16 chr5 169264848 169264976 -33820556 - MER5A DNA MER1_type -13 176 21 303 241 45 80 chr5 169265379 169265491 -33820041 - L3 LINE CR1 -15 1562 1455 288 240 248 8 chr5 169265633 169265754 -33819778 + MIR SINE MIR 32 181 -81 370 234 20 16 chr5 169265801 169265911 -33819621 - MIR SINE MIR -62 146 45 359 325 68 25 chr5 169266102 169266265 -33819267 + MER5B DNA MER1_type 9 178 0 190 100 0 0 chr5 169266688 169266718 -33818814 - MIR SINE MIR -138 70 41 640 325 119 8 chr5 169266843 169267320 -33818212 - L1MC4a LINE L1 -1817 5991 5462 180 304 125 18 chr5 169267540 169267652 -33817880 + MIR SINE MIR 20 143 -65 192 330 55 11 chr5 169268040 169268131 -33817401 + MIR3 SINE MIR 84 178 -30 1238 246 119 36 chr5 169269009 169269358 -33816174 + L2 LINE L2 2585 2903 -410 2069 120 0 35 chr5 169269358 169269674 -33815858 - AluSx SINE Alu -7 305 1 1238 246 119 36 chr5 169269674 169269982 -33815550 + L2 LINE L2 2903 3307 -6 364 246 177 8 chr5 169270383 169270513 -33815019 - MER5A DNA MER1_type -37 152 1 305 339 52 0 chr5 169270536 169270682 -33814850 + MIR SINE MIR 18 181 -81 187 282 84 56 chr5 169271844 169271986 -33813546 + MIR3 SINE MIR 41 186 -22 388 283 40 103 chr5 169273138 169273361 -33812171 - L2 LINE L2 -98 3174 2966 266 288 0 14 chr5 169273774 169273847 -33811685 + MIR SINE MIR 81 152 -56 440 277 21 7 chr5 169273868 169274009 -33811523 - MER103 DNA DNA -7 159 17 429 303 71 19 chr5 169274116 169274271 -33811261 + MIR SINE MIR 13 175 -87 199 296 83 28 chr5 169274576 169274684 -33810848 + L3 LINE CR1 1357 1470 -107 309 26 0 0 chr5 169275066 169275104 -33810428 + (TG)n Simple_repeat Simple_repeat 2 39 0 23 54 0 0 chr5 169275401 169275438 -33810094 + AT_rich Low_complexity Low_complexity 1 37 0 1714 191 3 3 chr5 169275768 169276071 -33809461 + AluJo SINE Alu 1 303 -9 375 248 85 46 chr5 169276141 169276294 -33809238 + MIR3 SINE MIR 2 160 -48 226 305 92 21 chr5 169276737 169276878 -33808654 + MIR SINE MIR 102 252 -10 568 260 139 0 chr5 169277595 169277782 -33807750 + MIR SINE MIR 41 255 -7 283 330 26 26 chr5 169277830 169277945 -33807587 - MIR SINE MIR -6 256 142 254 297 44 0 chr5 169277963 169278054 -33807478 - MIR SINE MIR -87 175 81 227 286 110 0 chr5 169279199 169279290 -33806242 + MIR SINE MIR 30 130 -132 204 143 0 0 chr5 169279416 169279458 -33806074 + (CA)n Simple_repeat Simple_repeat 2 43 0 2554 58 0 0 chr5 169279514 169279825 -33805707 - AluY SINE Alu 0 311 1 425 288 34 0 chr5 169279962 169280080 -33805452 - MIR SINE MIR -34 228 107 571 281 45 11 chr5 169280231 169280409 -33805123 + MIR3 SINE MIR 4 187 -21 519 297 11 16 chr5 169281749 169281934 -33803598 - L3 LINE CR1 -336 1241 1058 * 653 317 12 35 chr5 169281925 169282184 -33803348 + MIR SINE MIR 8 260 -2 221 163 0 0 chr5 169282186 169282229 -33803303 + (CAT)n Simple_repeat Simple_repeat 2 44 0 2248 96 0 0 chr5 169282243 169282545 -33802987 + AluY SINE Alu 1 302 -9 366 333 158 8 chr5 169282545 169282779 -33802753 - L3 LINE CR1 -542 1035 767 309 300 78 11 chr5 169283361 169283541 -33801991 + L2 LINE L2 1564 1755 -1559 478 316 108 14 chr5 169283559 169283771 -33801761 - MIR SINE MIR -19 243 12 320 308 48 58 chr5 169283822 169284030 -33801502 - MLT1K LTR MaLR -27 561 356 341 281 86 43 chr5 169284559 169284698 -33800834 - L2 LINE L2 0 3313 3169 656 257 69 34 chr5 169285462 169285702 -33799830 + MIR SINE MIR 17 256 -6 293 236 28 0 chr5 169285734 169285806 -33799726 + MIR SINE MIR 105 178 -84 223 380 85 0 chr5 169285919 169286048 -33799484 + MIR SINE MIR 119 258 -4 784 19 39 0 chr5 169286133 169286237 -33799295 + (GAAA)n Simple_repeat Simple_repeat 2 109 0 253 321 25 0 chr5 169286245 169286326 -33799206 - MIR SINE MIR -103 105 23 538 291 182 8 chr5 169286662 169286907 -33798625 - LTR33 LTR ERVL 0 521 320 477 0 0 0 chr5 169286907 169286960 -33798572 + (TG)n Simple_repeat Simple_repeat 1 53 0 538 291 182 8 chr5 169286960 169287071 -33798461 - LTR33 LTR ERVL -201 320 103 316 149 3 0 chr5 169287078 169287138 -33798394 - AluJ/FLAM SINE Alu -211 91 37 278 259 222 0 chr5 169287649 169287757 -33797775 + L2 LINE L2 3132 3263 -9 1042 284 96 0 chr5 169287824 169288180 -33797352 - MLT1K LTR MaLR -82 506 117 2241 109 0 0 chr5 169288306 169288609 -33796923 + AluSx SINE Alu 1 303 -9 213 250 259 31 chr5 169288895 169289119 -33796413 - L2 LINE L2 -640 2674 2400 23 33 0 0 chr5 169289433 169289463 -33796069 + AT_rich Low_complexity Low_complexity 1 30 0 1027 184 48 0 chr5 169289466 169289673 -33795859 - L1MA8 LINE L1 -4 6287 6071 381 289 10 1 chr5 169289704 169289818 -33795714 - MIR SINE MIR -62 146 38 658 314 31 18 chr5 169289872 169290098 -33795434 - MIR SINE MIR -2 260 32 274 278 109 0 chr5 169290173 169290328 -33795204 - MIR3 SINE MIR -21 187 14 2176 107 3 0 chr5 169290888 169291187 -33794345 + AluSx SINE Alu 1 300 -12 196 311 27 14 chr5 169291549 169291623 -33793909 - L2 LINE L2 -1 3312 3238 455 0 18 0 chr5 169291905 169291960 -33793572 + (TG)n Simple_repeat Simple_repeat 2 57 0 331 275 31 69 chr5 169292287 169292447 -33793085 + MIR SINE MIR 2 155 -107 188 312 52 0 chr5 169293950 169294027 -33791505 - MIR SINE MIR -103 105 25 403 255 185 43 chr5 169294438 169294622 -33790910 - MER63A DNA MER1_type 0 210 1 322 287 11 0 chr5 169294753 169294840 -33790692 + MIR SINE MIR 48 135 -73 348 262 0 39 chr5 169295130 169295233 -33790299 + MIR SINE MIR 39 137 -125 408 127 0 0 chr5 169295234 169295305 -33790227 - Alu SINE Alu 0 310 240 1835 118 55 0 chr5 169295341 169295612 -33789920 - AluSq SINE Alu -2 311 26 209 291 51 0 chr5 169295612 169295691 -33789841 + MIR SINE MIR 122 204 -58 490 287 89 59 chr5 169295708 169295945 -33789587 + MIR SINE MIR 2 245 -17 1083 185 14 45 chr5 169295952 169296174 -33789358 + MER20 DNA MER1_type 1 215 -4 983 246 137 18 chr5 169296202 169296726 -33788806 - L2 LINE L2 -82 3231 2642 429 295 106 5 chr5 169297131 169297338 -33788194 - MIR SINE MIR 0 262 35 362 240 157 16 chr5 169297941 169298062 -33787470 - MIR3 SINE MIR -51 157 20 360 264 64 9 chr5 169299350 169299460 -33786072 - MIR3 SINE MIR -34 174 59 499 250 157 17 chr5 169300626 169300798 -33784734 - Charlie8 DNA MER1_type -2152 265 70 2245 75 7 0 chr5 169300811 169301104 -33784428 + AluY SINE Alu 3 297 -14 182 367 13 0 chr5 169301190 169301269 -33784263 - MIR SINE MIR -106 102 23 456 287 89 13 chr5 169301999 169302156 -33783376 + MIR SINE MIR 1 169 -93 843 238 31 0 chr5 169302817 169303010 -33782522 + AluJo SINE Alu 1 199 -113 1652 185 3 19 chr5 169303010 169303324 -33782208 - AluJb SINE Alu -3 309 1 247 312 29 43 chr5 169303457 169303595 -33781937 + MIR SINE MIR 99 234 -28 230 216 45 102 chr5 169303587 169303675 -33781857 - MIR3 SINE MIR -12 196 114 * 241 269 167 28 chr5 169303726 169303834 -33781698 + MIR3 SINE MIR 36 158 -50 307 296 53 46 chr5 169304402 169304554 -33780978 - MER5A DNA MER1_type -34 155 3 306 155 17 0 chr5 169304564 169304622 -33780910 - MIR SINE MIR -64 144 86 303 389 67 16 chr5 169305391 169305584 -33779948 + MIR SINE MIR 57 259 -3 285 296 73 104 chr5 169305626 169305913 -33779619 - L2 LINE L2 -2 3270 2993 362 224 47 0 chr5 169306794 169306901 -33778631 - MER115 DNA AcHobo -493 200 89 269 200 17 0 chr5 169306903 169306963 -33778569 - MER81 DNA DNA -2 112 52 242 164 98 0 chr5 169307234 169307295 -33778237 - MIR SINE MIR -57 151 85 366 275 169 7 chr5 169307363 169307505 -33778027 + MLT1K LTR MaLR 103 267 -321 210 162 0 0 chr5 169307724 169307761 -33777771 + A-rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr5 169307966 169307989 -33777543 + (TTA)n Simple_repeat Simple_repeat 2 24 0 472 226 92 37 chr5 169308241 169308405 -33777127 - MIR3 SINE MIR -28 180 8 817 259 66 4 chr5 169311761 169312004 -33773528 - Charlie8 DNA MER1_type -2141 276 19 207 324 0 15 chr5 169312408 169312476 -33773056 - MER5A DNA MER1_type -26 163 97 213 284 0 15 chr5 169312860 169312927 -33772605 - MIR3 SINE MIR -52 156 91 839 150 0 0 chr5 169312975 169313108 -33772424 + AluJb SINE Alu 1 133 -179 438 53 0 0 chr5 169313135 169313192 -33772340 + (GA)n Simple_repeat Simple_repeat 2 58 0 2062 122 0 3 chr5 169313830 169314142 -33771390 - AluSx SINE Alu 0 311 1 405 250 48 90 chr5 169314316 169314504 -33771028 + MIR3 SINE MIR 14 193 -15 1180 114 6 0 chr5 169314555 169314721 -33770811 + AluSx SINE Alu 5 171 -141 438 174 11 22 chr5 169314950 169315042 -33770490 + AluJ/FRAM SINE Alu 220 310 -2 1953 143 14 0 chr5 169315047 169315341 -33770191 + AluSx SINE Alu 2 299 -13 259 267 222 0 chr5 169315848 169315938 -33769594 + MIR3 SINE MIR 13 122 -86 335 318 123 13 chr5 169315965 169316119 -33769413 + MER5B DNA MER1_type 7 177 -1 267 200 43 29 chr5 169316826 169316896 -33768636 - MIR3 SINE MIR -50 158 88 240 376 10 10 chr5 169317117 169317218 -33768314 - L2 LINE L2 -211 3061 2961 527 200 48 0 chr5 169317509 169317634 -33767898 + MIR3 SINE MIR 57 187 -21 249 271 106 50 chr5 169317662 169317861 -33767671 + L1MC4a LINE L1 5533 5742 -379 342 324 112 12 chr5 169317908 169318078 -33767454 + MIR SINE MIR 76 262 0 375 313 30 0 chr5 169318085 169318209 -33767323 + L1MC4a LINE L1 5814 5944 -1864 2308 109 3 0 chr5 169318209 169318520 -33767012 + AluSx SINE Alu 1 312 0 360 238 119 0 chr5 169318941 169319042 -33766490 - MIR3 SINE MIR -15 193 81 432 277 34 8 chr5 169319838 169319957 -33765575 - L2 LINE L2 0 3313 3192 247 250 0 0 chr5 169319963 169320019 -33765513 + MER106B DNA MER1_type 1 56 -1003 282 222 111 12 chr5 169320474 169320555 -33764977 - MLT1K LTR MaLR -1 587 499 2342 164 92 4 chr5 169320731 169321212 -33764320 + L1MB5 LINE L1 5528 6050 -124 379 250 269 0 chr5 169321423 169321579 -33763953 - MER3 DNA MER1_type -10 199 2 1884 109 88 14 chr5 169321603 169321888 -33763644 - AluSq SINE Alu -7 306 1 385 324 0 0 chr5 169321888 169321995 -33763537 - MIR SINE MIR -57 151 45 320 279 119 15 chr5 169322043 169322329 -33763203 - L1ME4a LINE L1 -1 6120 5807 220 312 112 24 chr5 169322339 169322464 -33763068 - L2 LINE L2 -243 3070 2935 412 322 0 16 chr5 169322505 169322626 -33762906 - MIR SINE MIR -67 141 23 537 239 122 48 chr5 169323331 169323561 -33761971 + MIR SINE MIR 16 262 0 183 80 0 0 chr5 169323611 169323636 -33761896 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 1753 132 84 34 chr5 169323729 169324086 -33761446 - THE1C LTR MaLR 0 375 1 408 242 176 53 chr5 169324135 169324494 -33761038 - L2 LINE L2 -83 3230 2828 631 283 90 9 chr5 169325186 169325409 -33760123 - MIR SINE MIR -1 261 21 872 243 50 19 chr5 169325431 169325752 -33759780 + MER113 DNA MER1_type? 117 447 -74 949 246 163 30 chr5 169325764 169326125 -33759407 + MLT1I LTR MaLR 1 409 0 773 282 13 13 chr5 169326419 169326646 -33758886 + MIR SINE MIR 36 262 0 217 275 202 23 chr5 169326656 169326874 -33758658 + L2 LINE L2 2985 3241 -31 1257 169 30 117 chr5 169327074 169327500 -33758032 - MLT1C LTR MaLR -3 464 76 1606 158 14 0 chr5 169327502 169327780 -33757752 - Tigger3(Golem) DNA MER2_type -3 3026 2745 510 216 20 68 chr5 169327799 169327947 -33757585 + FLAM_A SINE Alu 2 142 0 1118 116 6 0 chr5 169327951 169328115 -33757417 - Tigger3(Golem) DNA MER2_type -282 2747 2583 1588 175 0 76 chr5 169328116 169328430 -33757102 - AluJo SINE Alu -22 290 1 894 154 0 0 chr5 169328430 169328560 -33756972 - AluJb SINE Alu -177 135 6 262 44 0 67 chr5 169328569 169328614 -33756918 - Tigger3(Golem) DNA MER2_type -2691 338 297 1452 178 65 17 chr5 169328650 169328943 -33756589 - Tigger3(Golem) DNA MER2_type -2722 307 1 295 203 43 0 chr5 169328948 169329017 -33756515 - MLT1C LTR MaLR -395 72 1 1636 70 25 0 chr5 169330648 169330849 -33754683 + AluSq SINE Alu 90 295 -18 1160 264 50 19 chr5 169330861 169330899 -33754633 + MER113 DNA MER1_type? 88 123 -398 1878 98 112 7 chr5 169330899 169331176 -33754356 - AluSg1 SINE Alu -3 306 1 1160 264 50 19 chr5 169331176 169331558 -33753974 + MER113 DNA MER1_type? 123 521 0 200 214 71 0 chr5 169332458 169332500 -33753032 + MIR SINE MIR 133 177 -85 283 301 48 0 chr5 169332573 169332655 -33752877 + MIR SINE MIR 32 117 -145 350 250 171 14 chr5 169332655 169332795 -33752737 + MER91A DNA MER1_type 1 162 -34 256 211 35 0 chr5 169332878 169332935 -33752597 + MER91A DNA MER1_type 132 190 0 245 211 0 19 chr5 169332936 169332988 -33752544 + MIR3 SINE MIR 112 162 -46 442 204 43 0 chr5 169333548 169333641 -33751891 - MIR3 SINE MIR -30 178 82 2566 66 0 22 chr5 169334138 169334455 -33751077 + AluSg SINE Alu 1 310 0 203 156 0 0 chr5 169335172 169335204 -33750328 + GA-rich Low_complexity Low_complexity 2 33 0 375 78 0 0 chr5 169335509 169335560 -33749972 + (TAA)n Simple_repeat Simple_repeat 2 52 0 407 293 45 45 chr5 169335568 169335725 -33749807 - MIR SINE MIR -6 256 100 253 88 0 0 chr5 169336186 169336220 -33749312 + MIR SINE MIR 113 146 -62 289 297 79 0 chr5 169336356 169336457 -33749075 + MIR SINE MIR 132 240 -22 189 348 25 17 chr5 169336487 169336605 -33748927 - MIR SINE MIR -48 214 96 348 207 76 55 chr5 169336917 169337067 -33748465 - MIR3 SINE MIR -4 204 47 224 300 0 0 chr5 169337332 169337392 -33748140 - MIR SINE MIR -113 149 90 192 77 0 0 chr5 169337685 169337711 -33747821 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 236 53 26 0 chr5 169337886 169337924 -33747608 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2109 122 7 0 chr5 169337928 169338215 -33747317 - AluSx SINE Alu -23 289 1 809 202 56 25 chr5 169338413 169338611 -33746921 + MIR SINE MIR 3 206 -56 200 359 85 28 chr5 169338767 169339015 -33746517 - L3 LINE CR1 -12 1565 1304 336 207 18 117 chr5 169339157 169339268 -33746264 - L3 LINE CR1 -496 1081 982 253 342 50 8 chr5 169339539 169339659 -33745873 - MIR3 SINE MIR -70 138 14 209 267 198 30 chr5 169340090 169340191 -33745341 + MIR3 SINE MIR 37 154 -54 613 289 11 6 chr5 169340493 169340673 -33744859 - MIR SINE MIR -6 256 76 1021 125 0 0 chr5 169340991 169341127 -33744405 - FAM SINE Alu -18 167 32 630 323 20 31 chr5 169341673 169341927 -33743605 + MIR SINE MIR 12 262 0 2398 99 0 3 chr5 169342273 169342586 -33742946 + AluSx SINE Alu 1 312 0 369 261 81 31 chr5 169344297 169344458 -33741074 - MER5A DNA MER1_type -6 172 4 200 189 75 38 chr5 169344514 169344567 -33740965 - MIR3 SINE MIR -50 158 104 507 235 45 0 chr5 169344765 169344897 -33740635 - MIR3 SINE MIR -58 150 13 422 169 22 51 chr5 169345416 169345594 -33739938 + CT-rich Low_complexity Low_complexity 3 175 0 731 125 5 49 chr5 169345598 169345782 -33739750 + (TCTCC)n Simple_repeat Simple_repeat 3 178 0 482 170 18 53 chr5 169345784 169345955 -33739577 + CT-rich Low_complexity Low_complexity 3 167 0 390 361 28 6 chr5 169347767 169347947 -33737585 - MIR SINE MIR 0 262 79 184 241 72 60 chr5 169348225 169348308 -33737224 - MIR3 SINE MIR -21 187 104 342 0 0 0 chr5 169349443 169349481 -33736051 + (TCC)n Simple_repeat Simple_repeat 1 38 0 199 298 0 71 chr5 169350101 169350185 -33735347 + MIR SINE MIR 184 261 -1 680 276 43 9 chr5 169350495 169350705 -33734827 - Charlie8 DNA MER1_type -2198 219 3 356 237 53 53 chr5 169351298 169351429 -33734103 + MIR SINE MIR 17 147 -115 193 183 268 0 chr5 169351702 169351773 -33733759 - MIR SINE MIR -44 218 129 523 250 214 5 chr5 169352096 169352292 -33733240 - MIR SINE MIR -6 256 20 491 232 43 70 chr5 169353414 169353564 -33731968 - MIR SINE MIR -72 190 44 908 204 17 0 chr5 169353564 169353736 -33731796 - MER45A DNA AcHobo -3 175 1 491 232 43 70 chr5 169353736 169353770 -33731762 - MIR SINE MIR -218 44 11 388 257 37 0 chr5 169354223 169354332 -33731200 + MIR3 SINE MIR 9 121 -87 578 273 157 29 chr5 169354564 169355070 -33730462 + L2 LINE L2 2725 3311 -2 307 232 63 32 chr5 169357534 169357629 -33727903 + MIR3 SINE MIR 108 205 -3 1602 230 34 44 chr5 169357788 169358261 -33727271 + MER113 DNA MER1_type? 1 468 -53 341 204 61 20 chr5 169358822 169358920 -33726612 + MIR SINE MIR 41 142 -66 358 221 39 0 chr5 169359535 169359612 -33725920 + MIR3 SINE MIR 112 191 -17 2194 136 0 0 chr5 169360090 169360385 -33725147 - AluSx SINE Alu -17 295 1 865 113 0 0 chr5 169360472 169360613 -33724919 - L1PA14 LINE L1 -1 6160 6020 660 247 32 16 chr5 169360642 169360832 -33724700 + MIR3 SINE MIR 6 198 -10 325 184 66 0 chr5 169362129 169362205 -33723327 - MER5A DNA MER1_type -83 106 26 468 285 62 14 chr5 169362227 169362371 -33723161 + MIR SINE MIR 1 151 -111 543 227 17 8 chr5 169362380 169362499 -33723033 - L2 LINE L2 0 3272 3153 328 243 0 0 chr5 169362501 169362575 -33722957 + MIR SINE MIR 189 262 0 296 366 101 8 chr5 169363412 169363680 -33721852 - L2 LINE L2 -38 3234 2942 473 257 44 22 chr5 169363860 169363996 -33721536 - MIR SINE MIR -110 152 14 21 0 0 0 chr5 169364028 169364049 -33721483 + AT_rich Low_complexity Low_complexity 1 21 0 1971 142 10 0 chr5 169365362 169365651 -33719881 + AluJo SINE Alu 7 298 -14 215 271 24 47 chr5 169365732 169365817 -33719715 + L2 LINE L2 2920 3002 -311 769 251 49 53 chr5 169366081 169366258 -33719274 + MIR SINE MIR 15 192 -70 2284 124 0 0 chr5 169366258 169366557 -33718975 + AluSx SINE Alu 1 299 -13 769 251 49 53 chr5 169366557 169366622 -33718910 + MIR SINE MIR 192 256 -6 314 287 17 35 chr5 169367342 169367457 -33718075 - MIR3 SINE MIR -85 123 11 381 22 0 0 chr5 169367595 169367641 -33717891 + (TG)n Simple_repeat Simple_repeat 2 47 0 294 140 18 0 chr5 169367642 169367699 -33717833 - L1MA10 LINE L1 -8 6326 6269 981 263 19 29 chr5 169367729 169368041 -33717491 + L1ME LINE L1 5370 5678 -492 210 163 23 0 chr5 169368391 169368434 -33717098 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1694 110 4 59 chr5 169368537 169368792 -33716740 - AluSg SINE Alu -13 297 57 494 287 63 7 chr5 169368885 169369028 -33716504 - MIR SINE MIR -100 162 12 253 239 14 14 chr5 169369064 169369135 -33716397 + L2 LINE L2 3182 3252 -20 2078 123 0 7 chr5 169369389 169369707 -33715825 - AluSx SINE Alu 0 316 1 349 260 70 0 chr5 169369707 169369807 -33715725 - L2 LINE L2 -6 3307 3201 300 353 43 0 chr5 169370205 169370321 -33715211 + MIR SINE MIR 32 152 -56 291 333 72 20 chr5 169370341 169370494 -33715038 - MIR SINE MIR -56 206 46 2243 103 10 0 chr5 169370800 169371090 -33714442 - AluSq SINE Alu -20 293 1 2157 126 7 3 chr5 169371095 169371397 -33714135 - AluSx SINE Alu -7 305 3 414 69 0 0 chr5 169371911 169371969 -33713563 + (TG)n Simple_repeat Simple_repeat 1 58 0 445 313 19 19 chr5 169372952 169373112 -33712420 - MIR SINE MIR -80 182 23 349 394 0 0 chr5 169373187 169373314 -33712218 + L1ME3A LINE L1 5106 5232 -914 300 310 30 19 chr5 169373329 169373577 -33711955 + L1ME3A LINE L1 5274 5526 -644 567 291 32 39 chr5 169373657 169373939 -33711593 + L1ME3A LINE L1 5680 5959 -211 225 163 0 0 chr5 169374095 169374138 -33711394 + Alu SINE Alu 1 43 -90 29 0 0 0 chr5 169374870 169374899 -33710633 + AT_rich Low_complexity Low_complexity 1 29 0 4251 36 0 0 chr5 169374899 169375394 -33710138 - L1PA5 LINE L1 -12 6142 5648 561 331 106 57 chr5 169375992 169376093 -33709439 + L2 LINE L2 2866 2961 -311 2263 111 3 0 chr5 169376093 169376399 -33709133 - AluSx SINE Alu -5 307 1 561 331 106 57 chr5 169376399 169376684 -33708848 + L2 LINE L2 2961 3271 -1 375 233 43 43 chr5 169377601 169377717 -33707815 + MIR SINE MIR 4 119 -89 1066 210 97 0 chr5 169377794 169378032 -33707500 + MIR SINE MIR 2 262 0 361 324 69 0 chr5 169378828 169379001 -33706531 - MER117 DNA MER1_type -7 190 6 288 274 56 12 chr5 169379069 169379208 -33706324 + MIR3 SINE MIR 64 197 -27 892 253 45 20 chr5 169379239 169379484 -33706048 - MIR SINE MIR 0 262 12 263 250 107 64 chr5 169379539 169379679 -33705853 + MIR SINE MIR 38 183 -79 198 0 0 0 chr5 169380410 169380432 -33705100 + (CAG)n Simple_repeat Simple_repeat 2 23 0 297 302 85 0 chr5 169380432 169380538 -33704994 - MIR SINE MIR -14 248 134 * 773 328 86 15 chr5 169380535 169380941 -33704591 + L2 LINE L2 2878 3312 -1 477 190 40 0 chr5 169380937 169381037 -33704495 - MIR SINE MIR -125 137 34 * 501 263 146 24 chr5 169381213 169381426 -33704106 + MIR SINE MIR 17 255 -7 461 312 171 16 chr5 169381936 169382317 -33703215 + L3 LINE CR1 1101 1540 -37 372 288 38 38 chr5 169382332 169382464 -33703068 + MIR SINE MIR 20 151 -111 418 336 67 0 chr5 169382684 169382833 -33702699 - MIR SINE MIR -63 199 41 230 254 16 0 chr5 169382941 169383004 -33702528 + MIR SINE MIR 103 166 -96 519 215 29 44 chr5 169383742 169383947 -33701585 + MER113 DNA MER1_type? 35 236 -285 194 328 16 0 chr5 169384270 169384331 -33701201 - L2 LINE L2 -14 3258 3197 478 254 33 13 chr5 169384466 169384617 -33700915 + MIR SINE MIR 38 192 -63 465 299 11 17 chr5 169384931 169385108 -33700424 + L1MC4a LINE L1 5734 5909 -1899 2112 112 0 0 chr5 169385450 169385786 -33699746 + AluSx SINE Alu 1 336 0 1731 181 10 7 chr5 169385791 169386101 -33699431 + AluJb SINE Alu 1 311 -1 23 68 0 0 chr5 169386124 169386168 -33699364 + AT_rich Low_complexity Low_complexity 1 44 0 2255 109 0 6 chr5 169386239 169386552 -33698980 + AluSx SINE Alu 1 311 -1 2351 73 0 10 chr5 169386727 169387029 -33698503 + AluY SINE Alu 1 299 -12 236 264 14 0 chr5 169387088 169387160 -33698372 + LTR16A1 LTR ERVL 20 92 -365 * 276 160 0 0 chr5 169387158 169387208 -33698324 + LTR16A1 LTR ERVL 406 455 -2 681 297 95 0 chr5 169388242 169388464 -33697068 + MIR SINE MIR 8 250 -12 976 274 24 4 chr5 169389210 169389462 -33696070 - MIR SINE MIR -1 261 5 529 253 92 29 chr5 169389634 169389808 -33695724 - MIR SINE MIR -73 189 5 620 201 6 3 chr5 169389884 169390235 -33695297 + (CA)n Simple_repeat Simple_repeat 1 352 0 254 276 51 77 chr5 169390289 169390445 -33695087 - MIR3 SINE MIR -39 169 18 246 208 0 0 chr5 169390606 169390645 -33694887 - MIR3 SINE MIR -19 189 151 344 324 27 27 chr5 169390645 169390793 -33694739 + MER5A DNA MER1_type 4 151 -38 242 303 34 11 chr5 169390804 169390893 -33694639 - MIR SINE MIR -77 131 41 389 234 138 0 chr5 169392118 169392212 -33693320 + L2 LINE L2 3201 3307 -6 2145 118 23 0 chr5 169392212 169392517 -33693015 + AluSx SINE Alu 1 312 0 250 291 181 22 chr5 169392829 169392968 -33692564 - MIR SINE MIR -55 153 21 818 262 44 4 chr5 169393034 169393259 -33692273 - MIR SINE MIR -28 234 1 626 102 0 51 chr5 169393521 169393619 -33691913 - AluSg SINE Alu -193 117 25 952 259 167 12 chr5 169393636 169394132 -33691400 + L2 LINE L2 2690 3267 -46 343 280 0 0 chr5 169394122 169394197 -33691335 - MIR SINE MIR -143 119 45 * 1840 135 0 24 chr5 169394234 169394531 -33691001 - AluJb SINE Alu -22 290 1 1301 129 5 28 chr5 169394902 169395119 -33690413 - AluJb SINE Alu -100 212 1 264 265 118 20 chr5 169395666 169395768 -33689764 + MER5A DNA MER1_type 49 160 -29 470 216 201 0 chr5 169397280 169397419 -33688113 - MER5A DNA MER1_type -6 183 17 341 215 89 0 chr5 169397435 169397514 -33688018 + MER5B DNA MER1_type 1 86 -92 538 331 89 20 chr5 169397562 169397748 -33687784 - L2 LINE L2 -20 3293 3121 2282 103 0 22 chr5 169397748 169398067 -33687465 + AluSq SINE Alu 1 312 -1 538 331 89 20 chr5 169398067 169398230 -33687302 - L2 LINE L2 -192 3121 2920 231 269 86 0 chr5 169398948 169399041 -33686491 - L1MC4a LINE L1 -1632 6176 6076 1326 268 42 31 chr5 169399137 169399678 -33685854 - L1MC4a LINE L1 -1900 5908 5362 508 286 30 0 chr5 169399759 169399927 -33685605 - Charlie8 DNA MER1_type -2212 205 33 228 361 46 28 chr5 169400088 169400196 -33685336 - MER5A DNA MER1_type -6 183 74 * 254 314 0 23 chr5 169400154 169400240 -33685292 - MIR SINE MIR -78 130 47 2117 243 86 48 chr5 169400819 169401577 -33683955 - MER21B LTR ERV1 -58 805 19 393 228 0 0 chr5 169401599 169401678 -33683854 - MER21B LTR ERV1 -773 90 12 220 365 55 22 chr5 169401682 169401863 -33683669 + L2 LINE L2 3121 3307 -6 257 286 143 9 chr5 169402151 169402256 -33683276 + L2 LINE L2 3153 3271 -1 363 236 25 99 chr5 169402352 169402413 -33683119 + MER5B DNA MER1_type 1 65 -113 1683 168 57 0 chr5 169402413 169402693 -33682839 + AluJo SINE Alu 1 296 -16 363 236 25 99 chr5 169402693 169402792 -33682740 + MER5B DNA MER1_type 65 149 -29 345 228 26 0 chr5 169403287 169403368 -33682164 - MIR SINE MIR -54 154 112 583 322 84 5 chr5 169403444 169403658 -33681874 + MIR SINE MIR 1 231 -31 213 311 74 15 chr5 169404401 169404536 -33680996 + MIR3 SINE MIR 20 162 -46 809 232 130 0 chr5 169404578 169404763 -33680769 + MER3 DNA MER1_type 1 209 0 656 270 74 26 chr5 169404766 169404996 -33680536 + MIR SINE MIR 8 248 -14 297 254 197 11 chr5 169405455 169405588 -33679944 + MIR SINE MIR 25 182 -65 314 258 50 25 chr5 169408033 169408153 -33677379 + MIR SINE MIR 27 149 -59 535 318 120 48 chr5 169408309 169408708 -33676824 - L3 LINE CR1 -118 1459 1032 204 283 0 0 chr5 169408747 169408800 -33676732 + L2 LINE L2 2925 2977 -337 1091 172 0 21 chr5 169408827 169409013 -33676519 - FRAM SINE Alu -3 173 1 338 291 101 64 chr5 169409020 169409316 -33676216 + L2 LINE L2 3004 3310 -3 200 128 0 21 chr5 169409597 169409644 -33675888 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 180 152 0 0 chr5 169409755 169409788 -33675744 + (TG)n Simple_repeat Simple_repeat 1 33 0 258 81 0 0 chr5 169409946 169409983 -33675549 + (GGGA)n Simple_repeat Simple_repeat 2 38 0 206 280 96 121 chr5 169410193 169410350 -33675182 + MIR3 SINE MIR 55 207 -1 391 304 0 0 chr5 169410426 169410528 -33675004 - MIR SINE MIR -108 154 53 253 311 0 0 chr5 169410685 169410746 -33674786 + MIR SINE MIR 90 150 -58 212 119 0 24 chr5 169411211 169411253 -33674279 + (TC)n Simple_repeat Simple_repeat 1 41 0 278 301 228 7 chr5 169412354 169412490 -33673042 - MIR SINE MIR -19 243 78 360 0 0 0 chr5 169413403 169413443 -33672089 + (TG)n Simple_repeat Simple_repeat 1 40 0 479 311 90 12 chr5 169414557 169414724 -33670808 + L3 LINE CR1 1397 1576 -1 198 0 0 0 chr5 169415834 169415856 -33669676 + (T)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 169416145 169416166 -33669366 + (A)n Simple_repeat Simple_repeat 1 21 0 403 320 23 84 chr5 169416347 169416408 -33669124 + MIR SINE MIR 19 82 -176 271 0 25 25 chr5 169416408 169416448 -33669084 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1945 131 3 3 chr5 169416450 169416732 -33668800 - AluSx SINE Alu -30 282 1 403 320 23 84 chr5 169416732 169416888 -33668644 + MIR SINE MIR 83 221 -37 276 233 41 0 chr5 169417363 169417436 -33668096 + GA-rich Low_complexity Low_complexity 2 77 0 607 233 131 0 chr5 169417814 169417990 -33667542 + MIR SINE MIR 63 261 -1 267 277 178 61 chr5 169418263 169418476 -33667056 + L3 LINE CR1 965 1202 -375 364 303 5 49 chr5 169418577 169418762 -33666770 + CT-rich Low_complexity Low_complexity 1 177 0 191 111 0 28 chr5 169418851 169418887 -33666645 + (GAA)n Simple_repeat Simple_repeat 3 37 0 270 310 150 0 chr5 169421558 169421671 -33663861 - MIR3 SINE MIR -15 193 64 229 197 66 16 chr5 169421903 169421964 -33663568 - MIR SINE MIR -115 147 84 380 270 30 0 chr5 169422403 169422503 -33663029 - MIR SINE MIR -63 145 43 690 279 50 0 chr5 169424210 169424389 -33661143 - MIR SINE MIR -28 234 47 847 262 52 16 chr5 169424403 169424651 -33660881 - MIR SINE MIR 0 262 6 394 283 134 92 chr5 169424682 169424965 -33660567 + L2 LINE L2 2978 3272 0 338 336 34 40 chr5 169424979 169425128 -33660404 - MIR3 SINE MIR -15 193 46 200 266 62 0 chr5 169425192 169425256 -33660276 + MIR3 SINE MIR 116 183 -25 462 305 29 20 chr5 169425681 169425855 -33659677 - MIR SINE MIR -52 156 24 314 229 0 0 chr5 169426895 169426956 -33658576 - MIR SINE MIR -66 142 82 403 379 21 0 chr5 169427081 169427226 -33658306 - MIR SINE MIR -48 214 67 307 309 64 0 chr5 169427306 169427416 -33658116 - MIR3 SINE MIR -11 197 81 311 319 30 96 chr5 169427772 169428073 -33657459 - L1M4 LINE L1 -2781 3365 3085 22 35 0 0 chr5 169428522 169428551 -33656981 + GC_rich Low_complexity Low_complexity 1 29 0 412 215 42 90 chr5 169429259 169429403 -33656129 - MIR3 SINE MIR -2 206 70 180 111 0 0 chr5 169429589 169429616 -33655916 - MIR3 SINE MIR -6 202 176 * 306 184 184 64 chr5 169429597 169429706 -33655826 + L2 LINE L2 3192 3313 0 465 287 48 29 chr5 169429886 169430095 -33655437 - Charlie8 DNA MER1_type -2204 213 1 322 256 101 16 chr5 169430142 169430271 -33655261 + MER103 DNA DNA 24 163 -3 647 251 200 14 chr5 169430909 169431124 -33654408 + MIR SINE MIR 3 257 -5 334 306 0 10 chr5 169431130 169431228 -33654304 + L3 LINE CR1 1293 1389 -188 334 402 11 26 chr5 169431966 169432155 -33653377 + L3 LINE CR1 1390 1575 -2 225 94 0 0 chr5 169432249 169432281 -33653251 + (TG)n Simple_repeat Simple_repeat 2 33 0 194 368 0 53 chr5 169433281 169433357 -33652175 - L3b LINE CR1 -126 1457 1386 204 97 0 0 chr5 169434253 169434284 -33651248 + (CA)n Simple_repeat Simple_repeat 1 31 0 632 187 60 187 chr5 169434440 169434724 -33650808 + MIR SINE MIR 15 262 0 26 0 0 0 chr5 169435042 169435068 -33650464 + AT_rich Low_complexity Low_complexity 1 26 0 866 234 23 37 chr5 169435112 169435330 -33650202 - MIR SINE MIR -1 261 47 220 266 37 83 chr5 169436232 169436341 -33649191 + L2 LINE L2 3202 3305 -8 384 270 202 28 chr5 169436468 169436646 -33648886 + MIR SINE MIR 53 261 -1 962 251 119 46 chr5 169436903 169437298 -33648234 + MLT1K LTR MaLR 160 583 -5 435 283 42 0 chr5 169437348 169437468 -33648064 - L2 LINE L2 0 3272 3148 249 289 36 12 chr5 169438070 169438153 -33647379 + L2 LINE L2 3185 3269 -3 2150 101 0 57 chr5 169438162 169438478 -33647054 - AluSx SINE Alu -14 298 1 2492 233 99 79 chr5 169438520 169439194 -33646338 + MER69B DNA AcHobo 3 662 -1864 2247 126 0 7 chr5 169439194 169439503 -33646029 - AluSx SINE Alu -3 309 3 2492 233 99 79 chr5 169439503 169439539 -33645993 + MER69B DNA AcHobo 662 696 -1830 2105 156 51 70 chr5 169439539 169440013 -33645519 + MLT1C LTR MaLR 1 465 -2 2492 233 99 79 chr5 169440013 169440222 -33645310 + MER69B DNA AcHobo 696 941 -285 288 91 0 0 chr5 169440624 169440668 -33644864 + (TCC)n Simple_repeat Simple_repeat 2 45 0 204 40 0 0 chr5 169440816 169440841 -33644691 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 716 157 24 6 chr5 169440849 169441015 -33644517 + GA-rich Low_complexity Low_complexity 4 172 0 690 280 17 42 chr5 169441417 169441583 -33643949 + MIR SINE MIR 32 192 -70 2078 91 7 0 chr5 169441583 169441870 -33643662 + L1PA6 LINE L1 5866 6154 0 690 280 17 42 chr5 169441870 169441939 -33643593 + MIR SINE MIR 192 261 -1 428 312 0 46 chr5 169442377 169442550 -33642982 + MER103 DNA DNA 2 166 0 418 287 56 28 chr5 169442638 169442781 -33642751 + MIR SINE MIR 77 223 -39 207 215 59 49 chr5 169442902 169443005 -33642527 - MIR SINE MIR -106 102 2 239 309 136 0 chr5 169443081 169443191 -33642341 - MIR SINE MIR 0 262 138 661 326 62 0 chr5 169443227 169443454 -33642078 + MIR SINE MIR 19 259 -3 182 214 95 0 chr5 169443612 169443654 -33641878 - MIR3 SINE MIR -31 177 132 * 465 202 193 0 chr5 169443644 169443758 -33641774 + MIR SINE MIR 91 226 -36 1077 107 7 0 chr5 169443758 169443908 -33641624 + AluSp/q SINE Alu 163 313 0 216 235 0 20 chr5 169443920 169443971 -33641561 + MIR SINE MIR 213 262 0 202 276 20 87 chr5 169443961 169444092 -33641440 - MIR SINE MIR -77 131 30 * 22 0 0 0 chr5 169444155 169444177 -33641355 + AT_rich Low_complexity Low_complexity 1 22 0 225 282 204 0 chr5 169444587 169444690 -33640842 + L2 LINE L2 2924 3047 -225 1360 94 0 0 chr5 169444870 169445041 -33640491 + AluSp SINE Alu 140 310 -3 293 128 0 21 chr5 169445041 169445088 -33640444 + (GGA)n Simple_repeat Simple_repeat 2 47 0 351 207 35 23 chr5 169445093 169445267 -33640265 + GA-rich Low_complexity Low_complexity 1 176 0 431 301 51 6 chr5 169445293 169445449 -33640083 + MIR3 SINE MIR 23 185 -23 513 232 36 51 chr5 169446127 169446265 -33639267 + MIR SINE MIR 61 196 -66 517 275 90 45 chr5 169446293 169446602 -33638930 + L1MC2 LINE L1 5574 5755 -411 377 282 34 0 chr5 169446738 169446887 -33638645 + L1MD1 LINE L1 6081 6234 -8 2185 102 0 40 chr5 169446893 169447218 -33638314 + AluSx SINE Alu 1 312 0 908 194 186 8 chr5 169447228 169447480 -33638052 + L1MC2 LINE L1 6031 6327 -17 2002 126 3 46 chr5 169447480 169447806 -33637726 + AluSx SINE Alu 1 312 0 2417 80 0 3 chr5 169447818 169448117 -33637415 + AluY SINE Alu 1 298 -13 2192 101 3 7 chr5 169448976 169449262 -33636270 + AluSg1 SINE Alu 3 287 -22 519 284 94 17 chr5 169449358 169449578 -33635954 - MIR SINE MIR -17 191 13 208 328 22 52 chr5 169449688 169449822 -33635710 + MIR3 SINE MIR 1 130 -78 219 250 0 0 chr5 169449847 169449899 -33635633 + MIR SINE MIR 158 209 -53 386 246 0 7 chr5 169450234 169450376 -33635156 + (CA)n Simple_repeat Simple_repeat 2 142 0 1731 176 44 3 chr5 169450381 169450699 -33634833 - MER7A DNA MER2_type -17 329 1 2137 81 0 4 chr5 169450705 169450966 -33634566 + AluSq SINE Alu 24 283 -30 261 128 0 0 chr5 169450974 169451021 -33634511 + (TA)n Simple_repeat Simple_repeat 1 47 0 326 211 148 92 chr5 169451038 169451114 -33634418 + ORSL DNA AcHobo 126 196 -79 1259 118 49 15 chr5 169451114 169451318 -33634214 + L1PA11 LINE L1 5960 6170 -4 326 211 148 92 chr5 169451318 169451383 -33634149 + ORSL DNA AcHobo 196 275 0 1128 278 96 3 chr5 169451612 169451968 -33633564 + L2 LINE L2 1815 2203 -1111 260 226 16 0 chr5 169452025 169452087 -33633445 + L2 LINE L2 3242 3304 -9 2211 105 0 3 chr5 169452170 169452488 -33633044 - AluSq SINE Alu 0 317 1 215 214 43 129 chr5 169453509 169453579 -33631953 + L2 LINE L2 3249 3312 -1 478 262 85 0 chr5 169454062 169454203 -33631329 + MIR SINE MIR 40 192 -70 304 318 16 40 chr5 169454404 169454530 -33631002 - MIR3 SINE MIR -12 196 74 507 144 211 0 chr5 169454582 169454672 -33630860 + MER81 DNA DNA 5 113 -1 221 264 0 69 chr5 169454691 169454778 -33630754 - MIR SINE MIR -86 122 42 1347 105 0 0 chr5 169454859 169455030 -33630502 + AluSg/x SINE Alu 138 308 -2 606 243 74 7 chr5 169455364 169455512 -33630020 - MIR SINE MIR -20 242 85 375 243 66 29 chr5 169455950 169456086 -33629446 + MER5B DNA MER1_type 35 175 -3 3843 168 45 33 chr5 169456370 169457247 -33628285 - L1MB3 LINE L1 0 6183 5297 208 313 0 15 chr5 169457380 169457447 -33628085 - L2 LINE L2 -15 3257 3192 2333 92 0 13 chr5 169457484 169457789 -33627743 + AluSq SINE Alu 1 301 -12 269 287 15 11 chr5 169457794 169457888 -33627644 + L1ME4a LINE L1 5665 5762 -359 480 332 56 20 chr5 169457958 169458208 -33627324 + L1ME4a LINE L1 5861 6119 -2 1234 262 47 80 chr5 169458308 169458857 -33626675 + MLT1H LTR MaLR 19 549 0 457 259 0 36 chr5 169458861 169458973 -33626559 - MIR SINE MIR -108 154 47 328 276 19 0 chr5 169459173 169459278 -33626254 + L1ME3A LINE L1 6030 6136 -34 2210 98 7 0 chr5 169459284 169459609 -33625923 - AluSx SINE Alu 0 327 1 261 317 28 35 chr5 169459632 169459774 -33625758 - L1ME LINE L1 -433 5729 5589 580 253 13 20 chr5 169460469 169460619 -33624913 + MIR SINE MIR 48 196 -66 481 332 49 18 chr5 169460863 169461089 -33624443 + MIR SINE MIR 18 250 -12 281 281 141 0 chr5 169461168 169461289 -33624243 + MIR SINE MIR 116 253 -9 2221 112 7 7 chr5 169462084 169462389 -33623143 - AluSx SINE Alu -7 305 1 439 289 120 0 chr5 169462400 169462542 -33622990 - MIR SINE MIR -56 206 48 580 276 169 35 chr5 169462989 169463250 -33622282 + L2 LINE L2 3005 3300 -13 630 303 49 23 chr5 169463259 169463645 -33621887 + L1ME4a LINE L1 5562 5957 -164 218 217 14 0 chr5 169464047 169464116 -33621416 + (TG)n Simple_repeat Simple_repeat 2 71 0 224 325 8 32 chr5 169464119 169464245 -33621287 + (TATG)n Simple_repeat Simple_repeat 4 126 0 * 320 307 22 28 chr5 169464188 169464367 -33621165 + (TG)n Simple_repeat Simple_repeat 1 178 0 538 322 189 5 chr5 169464702 169465146 -33620386 + L2 LINE L2 2384 2909 -405 1601 207 46 51 chr5 169466134 169466545 -33618987 + LTR2 LTR ERV1 41 449 0 956 300 47 53 chr5 169466591 169467077 -33618455 - L2 LINE L2 -17 3296 2814 326 279 74 0 chr5 169467082 169467204 -33618328 + L1ME4a LINE L1 5795 5925 -196 2234 86 7 0 chr5 169467354 169467671 -33617861 - AluY SINE Alu 0 319 1 5369 110 40 13 chr5 169467722 169468624 -33616908 + L1MA5A LINE L1 5372 6297 0 212 186 0 0 chr5 169468964 169469002 -33616530 - MIR SINE MIR -112 150 114 796 163 12 0 chr5 169469042 169469214 -33616318 + (ATG)n Simple_repeat Simple_repeat 1 174 0 419 174 9 37 chr5 169469215 169469434 -33616098 + (ATGGTG)n Simple_repeat Simple_repeat 1 213 0 436 301 72 0 chr5 169469607 169469760 -33615772 + MIR SINE MIR 79 242 -20 181 286 89 9 chr5 169470198 169470310 -33615222 + L2 LINE L2 2933 3053 -219 522 315 0 7 chr5 169470896 169471042 -33614490 - L2 LINE L2 0 3313 3169 484 79 0 26 chr5 169471192 169471268 -33614264 + L1PA3 LINE L1 6080 6153 -2 2429 84 0 0 chr5 169471366 169471664 -33613868 - AluSx SINE Alu -14 298 1 2332 100 7 0 chr5 169471880 169472181 -33613351 - AluSx SINE Alu -9 303 1 565 94 0 21 chr5 169472387 169472483 -33613049 + (GGA)n Simple_repeat Simple_repeat 1 94 0 408 304 98 33 chr5 169472530 169472714 -33612818 - MIR SINE MIR -33 229 34 501 190 10 0 chr5 169472861 169472961 -33612571 - MER53 DNA DNA 0 189 89 614 154 29 0 chr5 169473074 169473178 -33612354 - MER53 DNA DNA -81 108 2 774 159 30 0 chr5 169474083 169474215 -33611317 + MER5A DNA MER1_type 1 136 -53 342 0 0 0 chr5 169474224 169474262 -33611270 + (TG)n Simple_repeat Simple_repeat 1 38 0 2391 98 0 3 chr5 169474292 169474597 -33610935 - AluSx SINE Alu -2 310 7 1454 219 109 2 chr5 169474601 169475078 -33610454 - L1M LINE L1 -743 5403 4906 309 295 0 0 chr5 169475128 169475206 -33610326 + L2 LINE L2 2977 3054 -218 735 289 51 4 chr5 169475605 169475840 -33609692 - MIR SINE MIR -16 246 1 401 319 29 26 chr5 169476472 169476646 -33608886 - MIR SINE MIR -65 143 9 292 308 138 41 chr5 169477012 169477207 -33608325 + MIR SINE MIR 29 242 -20 282 355 65 39 chr5 169477245 169477555 -33607977 - L2 LINE L2 -8 3264 2947 258 308 111 8 chr5 169478149 169478266 -33607266 - MIR SINE MIR -26 236 108 697 309 36 8 chr5 169478391 169478643 -33606889 - MIR SINE MIR 0 262 4 206 313 0 15 chr5 169479332 169479399 -33606133 - MIR SINE MIR -89 173 108 283 257 49 95 chr5 169479443 169479614 -33605918 - MIR SINE MIR -69 139 13 2497 67 0 3 chr5 169479909 169480207 -33605325 - AluY SINE Alu -14 297 1 21 0 0 0 chr5 169480871 169480892 -33604640 + AT_rich Low_complexity Low_complexity 1 21 0 2515 79 3 0 chr5 169480914 169481218 -33604314 - AluSq SINE Alu 0 313 9 193 300 17 0 chr5 169481886 169481946 -33603586 - L2 LINE L2 -13 3300 3240 236 278 97 0 chr5 169482000 169482072 -33603460 + L2 LINE L2 3174 3252 -20 271 256 153 29 chr5 169482128 169482265 -33603267 + MIR SINE MIR 63 216 -46 630 201 67 27 chr5 169482328 169482560 -33602972 + MER106B DNA MER1_type 1 1059 0 617 247 60 60 chr5 169482561 169482743 -33602789 + MIR SINE MIR 10 195 -67 1902 139 0 41 chr5 169482743 169483057 -33602475 + AluJb SINE Alu 1 302 0 617 247 60 60 chr5 169483057 169483124 -33602408 + MIR SINE MIR 194 260 -2 482 172 8 102 chr5 169483366 169483494 -33602038 + MER91B DNA MER1_type 12 127 -63 375 271 9 19 chr5 169483505 169483612 -33601920 + MER91B DNA MER1_type 85 190 0 255 246 16 0 chr5 169483612 169483673 -33601859 + L2 LINE L2 3207 3268 -4 209 288 126 9 chr5 169484105 169484216 -33601316 + MIR3 SINE MIR 36 159 -49 294 158 0 132 chr5 169484317 169484393 -33601139 + MER117 DNA MER1_type 127 192 -5 225 186 163 70 chr5 169484438 169484524 -33601008 - L2 LINE L2 0 3313 3220 1175 227 43 141 chr5 169484536 169484907 -33600625 + L1ME1 LINE L1 5427 5833 -333 2144 104 4 0 chr5 169484907 169485187 -33600345 - AluSq SINE Alu 0 313 33 419 244 0 0 chr5 169485188 169485266 -33600266 - MER81 DNA DNA -36 78 1 1175 227 43 141 chr5 169485266 169485630 -33599902 + L1ME1 LINE L1 5832 6145 -21 199 212 30 45 chr5 169485650 169485716 -33599816 - L2 LINE L2 -91 3222 3158 * 452 234 263 7 chr5 169485706 169485980 -33599552 - L2 LINE L2 -1067 2247 1904 213 333 23 0 chr5 169486520 169486607 -33598925 + (CATG)n Simple_repeat Simple_repeat 2 90 0 436 221 41 0 chr5 169487586 169487708 -33597824 + L2 LINE L2 2624 2750 -564 294 204 0 0 chr5 169487708 169487757 -33597775 + MER57A LTR ERV1 295 343 -60 2548 60 0 0 chr5 169487772 169488074 -33597458 + AluY SINE Alu 1 302 -9 235 274 71 26 chr5 169488081 169488194 -33597338 + L2 LINE L2 2746 2863 -451 198 368 13 26 chr5 169488202 169488357 -33597175 + L2 LINE L2 3160 3312 -1 405 252 115 47 chr5 169488540 169488774 -33596758 + MIR SINE MIR 3 252 -10 263 224 0 30 chr5 169490681 169490748 -33594784 + GA-rich Low_complexity Low_complexity 2 66 0 612 234 32 6 chr5 169490954 169491112 -33594420 - MER117 DNA MER1_type -28 169 8 498 82 129 24 chr5 169491589 169491674 -33593858 + AluSg/x SINE Alu 202 295 -17 323 244 12 12 chr5 169491682 169491764 -33593768 + MER5A DNA MER1_type 63 144 -45 625 267 62 15 chr5 169493610 169493834 -33591698 + MIR SINE MIR 7 247 -15 248 275 93 47 chr5 169494793 169494986 -33590546 + L2 LINE L2 2852 3053 -219 221 311 158 36 chr5 169495158 169495380 -33590152 - MIR SINE MIR 0 262 14 330 298 0 0 chr5 169495419 169495503 -33590029 - MER5B DNA MER1_type -27 151 68 466 252 49 16 chr5 169495905 169496028 -33589504 - MIR3 SINE MIR -67 141 15 219 405 16 8 chr5 169496047 169496173 -33589359 + MIR SINE MIR 65 191 -71 331 259 60 22 chr5 169496571 169496766 -33588766 + MIR SINE MIR 42 247 -15 385 351 105 55 chr5 169497729 169498054 -33587478 - L2 LINE L2 0 3272 2932 2123 99 67 3 chr5 169499408 169499691 -33585841 - AluSg SINE Alu -9 301 1 180 0 0 0 chr5 169500133 169500153 -33585379 + (CCA)n Simple_repeat Simple_repeat 2 21 0 313 199 69 4 chr5 169500773 169500870 -33584662 - L1ME3A LINE L1 -18 6144 6045 625 203 87 0 chr5 169500872 169501010 -33584522 + L1ME3 LINE L1 5910 6059 -103 251 214 75 0 chr5 169501006 169501084 -33584448 - L1ME3 LINE L1 -110 6060 5972 * 2223 122 10 3 chr5 169501098 169501402 -33584130 - AluSg SINE Alu -4 306 1 229 157 0 59 chr5 169501402 169501453 -33584079 - L1ME3 LINE L1 -177 5985 5938 267 258 22 11 chr5 169501538 169501627 -33583905 + L1ME LINE L1 5575 5664 -457 3634 67 26 0 chr5 169501858 169502350 -33583182 - L1PA7 LINE L1 -4 6150 5646 1354 223 103 95 chr5 169502353 169502482 -33583050 - L1MB8 LINE L1 -1 6177 6050 2341 92 10 0 chr5 169502482 169502775 -33582757 + AluY SINE Alu 1 296 -15 1354 223 103 95 chr5 169502775 169503226 -33582306 - L1MB8 LINE L1 -128 6050 5588 1985 142 0 0 chr5 169503226 169503543 -33581989 + AluSg SINE Alu 2 318 0 1354 223 103 95 chr5 169503543 169503610 -33581922 - L1MB8 LINE L1 -590 5588 5523 2055 118 40 0 chr5 169503920 169504217 -33581315 - AluSg SINE Alu -1 309 1 342 259 61 23 chr5 169504281 169504412 -33581120 - L1ME LINE L1 -444 5722 5587 * 584 86 78 78 chr5 169504408 169504463 -33581069 + L1MA5A LINE L1 6063 6117 -180 2237 122 7 0 chr5 169504463 169504757 -33580775 - AluSx SINE Alu -16 296 1 584 86 78 78 chr5 169504757 169504829 -33580703 + L1MA5A LINE L1 6116 6190 -107 624 265 61 10 chr5 169504899 169505095 -33580437 - MER63A DNA MER1_type -3 207 2 1986 169 33 35 chr5 169505273 169505342 -33580190 - MSTB LTR MaLR 0 426 358 2113 103 40 13 chr5 169505342 169505643 -33579889 + AluY SINE Alu 1 309 -2 1986 169 33 35 chr5 169505643 169506000 -33579532 - MSTB LTR MaLR -68 358 1 2394 89 3 0 chr5 169506030 169506332 -33579200 + AluSp SINE Alu 1 303 -10 312 306 94 12 chr5 169507158 169507318 -33578214 + L2 LINE L2 2833 3005 -308 240 266 128 37 chr5 169507386 169507495 -33578037 + L2 LINE L2 3183 3301 -12 376 282 17 8 chr5 169507499 169507616 -33577916 + FLAM_C SINE Alu 4 121 -12 3695 154 91 57 chr5 169507618 169508863 -33576669 - LTR12 LTR ERV1 -23 1481 43 839 201 0 30 chr5 169508876 169509040 -33576492 + FRAM SINE Alu 1 154 -22 2854 13 0 6 chr5 169509049 169509361 -33576171 + AluYa5 SINE Alu 1 310 -1 237 132 0 0 chr5 169509376 169509414 -33576118 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 184 256 0 0 chr5 169509559 169509598 -33575934 + MIR SINE MIR 110 148 -60 211 304 76 10 chr5 169509848 169509986 -33575546 - MIR SINE MIR -72 190 35 185 281 208 0 chr5 169510222 169510318 -33575214 - MIR3 SINE MIR -88 120 5 312 335 108 5 chr5 169510417 169510602 -33574930 - MIR SINE MIR -57 205 2 612 281 152 12 chr5 169511114 169511449 -33574083 + LTR33 LTR ERVL 26 407 -114 928 251 14 0 chr5 169511454 169511669 -33573863 - MER58A DNA MER1_type -1 223 6 236 312 21 11 chr5 169511693 169511786 -33573746 + LTR33 LTR ERVL 422 515 -6 1045 281 44 51 chr5 169511904 169512378 -33573154 + LTR33 LTR ERVL 51 521 0 641 265 16 5 chr5 169512385 169512570 -33572962 + MER117 DNA MER1_type 8 194 -3 216 378 67 8 chr5 169513123 169513242 -33572290 - MIR3 SINE MIR -22 186 61 259 332 231 0 chr5 169513277 169513476 -33572056 - L3 LINE CR1 -199 1378 1134 181 340 11 32 chr5 169513625 169513719 -33571813 + MIR SINE MIR 99 190 -72 184 365 10 29 chr5 169513768 169513872 -33571660 - L3 LINE CR1 -613 964 863 647 272 10 26 chr5 169514092 169514287 -33571245 + MER117 DNA MER1_type 4 195 -2 2536 77 0 3 chr5 169514397 169514707 -33570825 - AluY SINE Alu -2 309 1 793 204 133 6 chr5 169514750 169514931 -33570601 - MER3 DNA MER1_type -4 205 2 * 859 205 25 15 chr5 169514931 169515129 -33570403 + MER20 DNA MER1_type 11 210 -9 373 188 62 119 chr5 169515291 169515467 -33570065 + MIR SINE MIR 95 260 -2 330 26 0 0 chr5 169516034 169516073 -33569459 + (TG)n Simple_repeat Simple_repeat 2 40 0 2004 150 0 3 chr5 169516136 169516436 -33569096 + AluJb SINE Alu 2 300 -12 311 250 0 0 chr5 169516627 169516703 -33568829 + MIR3 SINE MIR 81 156 -52 2559 58 3 10 chr5 169516783 169517096 -33568436 - AluY SINE Alu 0 311 1 401 279 54 16 chr5 169517498 169517627 -33567905 - MER5A DNA MER1_type -6 183 50 328 330 10 0 chr5 169517707 169517807 -33567725 - MIR3 SINE MIR -27 181 81 414 216 11 28 chr5 169517908 169518089 -33567443 + CT-rich Low_complexity Low_complexity 1 178 0 542 235 184 6 chr5 169519820 169519999 -33565533 - MIR SINE MIR -21 241 31 1990 60 140 15 chr5 169520073 169520338 -33565194 + AluY SINE Alu 3 300 -11 1092 158 24 0 chr5 169520340 169520505 -33565027 + AluSq SINE Alu 136 304 -9 241 269 0 30 chr5 169520567 169520634 -33564898 - MIR SINE MIR -171 91 27 2363 115 0 0 chr5 169520828 169521141 -33564391 + AluSq SINE Alu 1 313 0 374 338 56 34 chr5 169521838 169522028 -33563504 - HERV16 LTR ERVL -3112 1884 1700 2375 99 0 0 chr5 169522028 169522322 -33563210 - AluSq SINE Alu -19 294 1 1783 183 0 16 chr5 169522327 169522633 -33562899 - AluJo SINE Alu -11 301 1 374 338 56 34 chr5 169522633 169522833 -33562699 - HERV16 LTR ERVL -3299 1697 1368 1754 150 24 21 chr5 169522846 169523180 -33562352 + MER44D DNA MER2_type 5 609 0 256 89 54 0 chr5 169523198 169523254 -33562278 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 189 107 0 0 chr5 169523568 169523596 -33561936 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 267 227 0 30 chr5 169523748 169523814 -33561718 + L2 LINE L2 3209 3272 0 464 261 8 0 chr5 169523936 169524055 -33561477 - HERV16 LTR ERVL -3782 1214 1095 2572 71 0 0 chr5 169524189 169524500 -33561032 + AluY SINE Alu 1 311 0 710 249 34 44 chr5 169524849 169525054 -33560478 + MER20 DNA MER1_type 16 218 -1 518 296 57 16 chr5 169525175 169525256 -33560276 - LTR33 LTR ERVL 0 521 445 2377 62 0 0 chr5 169525256 169525547 -33559985 + AluY SINE Alu 1 291 -20 518 296 57 16 chr5 169525547 169525881 -33559651 - LTR33 LTR ERVL -76 445 64 2160 104 7 0 chr5 169525950 169526259 -33559273 + AluSp SINE Alu 1 311 -2 402 248 92 28 chr5 169526283 169526577 -33558955 - L1ME LINE L1 -684 5478 5161 1701 180 0 16 chr5 169526635 169526951 -33558581 - AluJo SINE Alu -1 311 1 2369 54 3 0 chr5 169527475 169527769 -33557763 - AluY SINE Alu -16 295 1 506 157 0 0 chr5 169527887 169527976 -33557556 + AluS SINE Alu 222 310 -2 356 300 33 79 chr5 169528351 169528591 -33556941 - MIR SINE MIR 0 262 34 22 35 0 0 chr5 169528710 169528739 -33556793 + AT_rich Low_complexity Low_complexity 1 29 0 4890 119 23 53 chr5 169528850 169528879 -33556653 + L1MA3 LINE L1 5447 5475 -830 1815 140 0 58 chr5 169528879 169529208 -33556324 + AluSx SINE Alu 1 310 -2 4890 119 23 53 chr5 169529208 169529583 -33555949 + L1MA3 LINE L1 5475 5860 -445 2509 56 0 0 chr5 169529583 169529887 -33555645 + AluY SINE Alu 1 304 -7 4890 119 23 53 chr5 169529887 169530365 -33555167 + L1MA3 LINE L1 5860 6303 -2 1904 147 3 3 chr5 169530527 169530826 -33554706 - AluJo SINE Alu -13 299 1 207 376 106 0 chr5 169531088 169531173 -33554359 - MIR3 SINE MIR -26 182 89 649 304 99 11 chr5 169534168 169534412 -33551120 + MIR SINE MIR 2 262 0 265 214 143 0 chr5 169534859 169534929 -33550603 - MER116 DNA Mariner 0 80 1 584 278 67 6 chr5 169535161 169535341 -33550191 - MIR SINE MIR -40 222 32 489 297 36 0 chr5 169535369 169535507 -33550025 + MIR SINE MIR 62 204 -58 619 246 47 47 chr5 169535522 169535758 -33549774 + L1ME LINE L1 11 246 -6613 3065 255 82 60 chr5 169535932 169537662 -33547870 + L1ME LINE L1 803 2493 -4464 1882 175 18 15 chr5 169537662 169538005 -33547527 + MER2 DNA MER2_type 1 344 0 3065 255 82 60 chr5 169538005 169538747 -33546785 + L1ME LINE L1 2493 3217 -3740 1653 155 17 17 chr5 169538747 169539044 -33546488 + AluJo SINE Alu 2 298 -14 3065 255 82 60 chr5 169539044 169539704 -33545828 + L1ME LINE L1 3217 4079 -2878 1845 226 65 21 chr5 169539736 169540654 -33544878 + L1ME LINE L1 5608 6556 -421 612 283 42 16 chr5 169540871 169541062 -33544470 - MIR SINE MIR -61 201 6 195 227 0 23 chr5 169541650 169541694 -33543838 - MIR SINE MIR -164 98 56 208 301 36 36 chr5 169541796 169541879 -33543653 + L2 LINE L2 3163 3245 -27 2023 116 3 0 chr5 169541981 169542274 -33543258 + AluSx SINE Alu 7 300 -12 220 281 0 16 chr5 169543448 169543512 -33542020 + L2 LINE L2 3208 3270 -2 1791 135 7 17 chr5 169543612 169543909 -33541623 + L1MB3 LINE L1 5381 5674 -509 1227 135 0 16 chr5 169543909 169544100 -33541432 + L1PA15 LINE L1 5977 6165 0 3855 91 7 25 chr5 169544135 169544348 -33541184 + L1PA13 LINE L1 5615 5830 -333 2291 80 10 0 chr5 169544348 169544648 -33540884 + AluY SINE Alu 1 303 -8 3855 91 7 25 chr5 169544648 169544992 -33540540 + L1PA13 LINE L1 5830 6162 -1 2386 188 11 0 chr5 169544992 169545435 -33540097 + L1MB3 LINE L1 5726 6176 -7 277 239 261 0 chr5 169545455 169545543 -33539989 + MIR SINE MIR 36 146 -62 220 208 0 0 chr5 169546763 169546811 -33538721 + (ATG)n Simple_repeat Simple_repeat 2 49 0 247 321 0 0 chr5 169546812 169546896 -33538636 - MIR SINE MIR -10 252 169 339 279 148 8 chr5 169547043 169547165 -33538367 - MIR SINE MIR -116 146 8 234 372 29 0 chr5 169547184 169547338 -33538194 + MIR SINE MIR 36 192 -68 279 0 0 0 chr5 169547508 169547539 -33537993 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 442 304 9 0 chr5 169547646 169547758 -33537774 - L2 LINE L2 -275 3038 2926 619 144 0 39 chr5 169548180 169548284 -33537248 - AluJ/FLAM SINE Alu -211 101 2 274 309 127 9 chr5 169548540 169548650 -33536882 + MIR3 SINE MIR 38 160 -48 313 248 19 99 chr5 169548705 169548866 -33536666 - MER103 DNA DNA -16 150 3 1079 139 33 0 chr5 169549174 169549354 -33536178 + AluJb SINE Alu 112 297 -15 479 265 138 20 chr5 169549370 169549566 -33535966 - MIR SINE MIR 0 262 44 451 318 45 7 chr5 169549893 169550047 -33535485 + MIR SINE MIR 31 190 -72 262 325 132 25 chr5 169550104 169550301 -33535231 - MIR SINE MIR -41 221 4 211 235 0 0 chr5 169550375 169550409 -33535123 + L2 LINE L2 3258 3291 -22 223 324 164 12 chr5 169551423 169551667 -33533865 + L2 LINE L2 2836 3116 -156 641 135 0 19 chr5 169551881 169551959 -33533573 + L1PA8A LINE L1 6030 6107 -24 255 61 0 0 chr5 169551959 169551992 -33533540 + (TG)n Simple_repeat Simple_repeat 2 34 0 641 135 0 19 chr5 169551992 169552017 -33533515 + L1PA8A LINE L1 6107 6131 0 401 213 11 11 chr5 169552039 169552133 -33533399 + MIR SINE MIR 42 135 -73 407 181 32 32 chr5 169552681 169552775 -33532757 - MIR SINE MIR -71 137 44 2183 104 3 3 chr5 169552822 169553131 -33532401 - AluSc SINE Alu 0 309 1 2332 84 0 0 chr5 169554386 169554694 -33530838 - AluSc SINE Alu -1 308 1 199 224 82 0 chr5 169554844 169554893 -33530639 - MIR SINE MIR -113 149 97 273 275 42 49 chr5 169554974 169555116 -33530416 - MIR3 SINE MIR -61 147 7 466 291 93 11 chr5 169555247 169555429 -33530103 + MIR SINE MIR 54 250 -12 394 208 39 71 chr5 169556413 169556567 -33528965 + MER113 DNA MER1_type? 3 151 -370 588 274 42 25 chr5 169556733 169556968 -33528564 + MIR SINE MIR 3 245 -17 321 193 121 12 chr5 169557034 169557117 -33528415 + L2 LINE L2 3181 3272 0 2282 89 3 0 chr5 169557236 169557539 -33527993 - AluSq SINE Alu -9 304 1 180 250 0 0 chr5 169557957 169557997 -33527535 - L2 LINE L2 -91 3181 3142 208 304 98 29 chr5 169558080 169558182 -33527350 + L2 LINE L2 3123 3231 -41 200 318 0 59 chr5 169558307 169558392 -33527140 - MIR SINE MIR -68 140 80 334 290 15 8 chr5 169559565 169559696 -33525836 - L2 LINE L2 -328 2985 2854 213 245 135 73 chr5 169559724 169559969 -33525563 - L2 LINE L2 -57 3256 2997 425 164 14 0 chr5 169560571 169560644 -33524888 + ORSL DNA AcHobo 1 74 -201 195 129 0 0 chr5 169560646 169560677 -33524855 + (CA)n Simple_repeat Simple_repeat 2 32 0 210 236 36 0 chr5 169561102 169561157 -33524375 - L2 LINE L2 0 3313 3257 426 90 0 2 chr5 169561159 169561415 -33524117 + AluSc SINE Alu 1 309 0 3230 160 19 24 chr5 169561721 169562221 -33523311 - L1MB3 LINE L1 -10 6173 5672 294 29 0 0 chr5 169562221 169562256 -33523276 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2254 56 0 7 chr5 169562256 169562540 -33522992 - AluY SINE Alu -29 282 1 3230 160 19 24 chr5 169562540 169562663 -33522869 - L1MB3 LINE L1 -509 5674 5552 236 286 26 0 chr5 169563542 169563619 -33521913 + MER103 DNA DNA 87 165 -1 2277 94 0 3 chr5 169563774 169564081 -33521451 + AluSx SINE Alu 1 306 -6 261 83 0 0 chr5 169564081 169564117 -33521415 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 207 343 44 22 chr5 169564568 169564705 -33520827 - MIR SINE MIR -36 226 87 1973 153 3 70 chr5 169564807 169565180 -33520352 - MER7A DNA MER2_type 0 346 1 913 145 122 23 chr5 169565267 169565439 -33520093 + MER5A DNA MER1_type 1 189 0 443 279 59 7 chr5 169565780 169565916 -33519616 + MIR SINE MIR 42 184 -78 231 337 22 33 chr5 169567009 169567101 -33518431 + MIR SINE MIR 43 133 -75 387 322 45 35 chr5 169567223 169567425 -33518107 + MIR SINE MIR 57 260 -2 1984 119 33 3 chr5 169568043 169568345 -33517187 - AluSp SINE Alu -2 311 1 415 195 0 23 chr5 169568357 169568444 -33517088 - L2 LINE L2 -49 3264 3180 2477 62 72 0 chr5 169568465 169568844 -33516688 + MER11B LTR ERVK 1 497 -739 584 229 186 6 chr5 169569270 169569453 -33516079 + MIR SINE MIR 34 249 -13 248 209 0 0 chr5 169569587 169569630 -33515902 - MIR SINE MIR -70 138 96 481 258 121 3 chr5 169570005 169570156 -33515376 + MIR SINE MIR 11 173 -89 421 204 11 11 chr5 169570230 169570318 -33515214 - MIR SINE MIR -68 194 107 444 287 63 28 chr5 169570326 169570580 -33514952 + L3 LINE CR1 1209 1471 -106 362 283 21 41 chr5 169570836 169570978 -33514554 + L2 LINE L2 2930 3068 -204 894 205 23 6 chr5 169570978 169571149 -33514383 + MER5A DNA MER1_type 1 174 -15 2380 99 0 0 chr5 169571149 169571461 -33514071 - AluSq SINE Alu -1 312 1 2010 133 0 0 chr5 169571879 169572172 -33513360 + AluSx SINE Alu 1 293 -19 28 0 0 0 chr5 169572172 169572200 -33513332 + AT_rich Low_complexity Low_complexity 1 28 0 219 36 0 0 chr5 169572202 169572230 -33513302 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 931 124 0 14 chr5 169572434 169572579 -33512953 + FLAM_C SINE Alu 1 143 0 184 239 156 28 chr5 169573250 169573359 -33512173 - L3 LINE CR1 -33 1544 1422 1074 293 108 25 chr5 169573379 169573839 -33511693 + L2 LINE L2 2184 2699 -615 778 144 0 58 chr5 169573839 169574016 -33511516 - FLAM_C SINE Alu 0 133 1 1074 293 108 25 chr5 169574016 169574108 -33511424 + L2 LINE L2 2699 2782 -532 1626 87 131 8 chr5 169574109 169574434 -33511098 + AluSg1 SINE Alu 1 356 0 624 253 140 48 chr5 169574434 169574943 -33510589 + L2 LINE L2 2772 3312 -1 203 283 76 22 chr5 169575100 169575192 -33510340 + MIR SINE MIR 76 172 -90 239 90 0 90 chr5 169575284 169575362 -33510170 + (CCCCCT)n Simple_repeat Simple_repeat 5 75 0 2718 45 0 3 chr5 169575751 169576063 -33509469 - AluY SINE Alu 0 311 1 194 179 54 36 chr5 169576664 169576720 -33508812 + MIR SINE MIR 74 130 -132 313 233 217 8 chr5 169576954 169577083 -33508449 + MIR SINE MIR 28 183 -79 3076 237 82 89 chr5 169577103 169577432 -33508100 + L2 LINE L2 1421 1751 -1562 788 153 0 0 chr5 169577432 169577556 -33507976 + FLAM_C SINE Alu 3 126 -7 1923 107 90 14 chr5 169577560 169577850 -33507682 + AluSx SINE Alu 1 312 0 2155 125 0 0 chr5 169577859 169578188 -33507344 + AluSc SINE Alu 1 329 0 3076 237 82 89 chr5 169578188 169578913 -33506619 + L2 LINE L2 1762 2490 -823 2192 123 33 0 chr5 169578913 169579215 -33506317 - AluSx SINE Alu 0 312 1 270 30 0 0 chr5 169579223 169579256 -33506276 - U2 snRNA snRNA -155 33 1 3076 237 82 89 chr5 169579256 169579734 -33505798 + L2 LINE L2 2497 2977 -336 6421 123 27 15 chr5 169579734 169580691 -33504841 + LTR5 LTR ERVK 1 969 0 3076 237 82 89 chr5 169580691 169580815 -33504717 + L2 LINE L2 2977 3100 -213 2290 128 0 0 chr5 169580815 169581127 -33504405 - AluSq SINE Alu -1 312 1 3076 237 82 89 chr5 169581127 169581321 -33504211 + L2 LINE L2 3100 3310 -3 514 339 19 0 chr5 169581424 169581649 -33503883 + L2 LINE L2 2800 3029 -243 191 171 0 0 chr5 169581660 169581695 -33503837 + MIR SINE MIR 217 251 -11 2303 95 0 3 chr5 169581705 169581999 -33503533 + AluSx SINE Alu 1 293 -19 1690 148 58 0 chr5 169582039 169582296 -33503236 - AluJb SINE Alu -36 276 5 1409 101 0 62 chr5 169582334 169582542 -33502990 + AluSx SINE Alu 1 195 -117 26 30 0 0 chr5 169582564 169582597 -33502935 + AT_rich Low_complexity Low_complexity 1 33 0 390 178 33 11 chr5 169582597 169582687 -33502845 - MIR SINE MIR -105 157 66 283 262 36 12 chr5 169582971 169583055 -33502477 + L1M LINE L1 5339 5424 -873 2337 81 7 0 chr5 169583076 169583371 -33502161 + AluSq SINE Alu 1 297 -16 356 43 0 0 chr5 169583404 169583451 -33502081 - AluY SINE Alu -7 295 249 272 148 50 30 chr5 169583458 169583559 -33501973 + (TA)n Simple_repeat Simple_repeat 1 103 0 1950 117 11 18 chr5 169583667 169583948 -33501584 + AluY SINE Alu 1 279 -32 228 282 92 42 chr5 169584045 169584187 -33501345 + MIR SINE MIR 114 262 0 446 141 82 0 chr5 169584239 169584324 -33501208 - FLAM_A SINE Alu -41 101 10 332 281 0 0 chr5 169585131 169585220 -33500312 + MIR SINE MIR 123 211 -51 232 261 34 23 chr5 169585733 169585821 -33499711 + MIR SINE MIR 17 105 -103 330 279 85 27 chr5 169587120 169587307 -33498225 + MIR SINE MIR 17 211 -51 276 326 92 39 chr5 169587810 169588199 -33497333 - L2 LINE L2 -22 3250 2841 315 129 54 118 chr5 169588279 169588335 -33497197 + MER58 DNA MER1_type 129 187 -2233 1772 168 10 10 chr5 169588335 169588639 -33496893 - AluJb SINE Alu -8 304 1 315 129 54 118 chr5 169588639 169588675 -33496857 + MER58 DNA MER1_type 187 2420 0 359 253 61 20 chr5 169589138 169589237 -33496295 - MER20B DNA MER1_type -620 163 61 1300 191 33 50 chr5 169589412 169589711 -33495821 - AluSx SINE Alu -18 294 1 289 235 44 15 chr5 169590579 169590647 -33494885 - L1MC4a LINE L1 -1908 5900 5831 208 224 0 20 chr5 169590986 169591035 -33494497 - L2 LINE L2 -346 2968 2921 1225 26 0 0 chr5 169591131 169591282 -33494250 + L1PA4 LINE L1 6000 6150 -5 1031 173 132 76 chr5 169591292 169591447 -33494085 + L1MD3 LINE L1 7629 7774 -221 1892 160 6 13 chr5 169591447 169591760 -33493772 + AluJo SINE Alu 1 311 -1 1031 173 132 76 chr5 169591760 169591946 -33493586 + L1MD3 LINE L1 7774 7989 -6 226 297 22 33 chr5 169592008 169592099 -33493433 + MIR SINE MIR 24 113 -149 1954 116 54 4 chr5 169592703 169592979 -33492553 - AluSx SINE Alu -22 290 1 2168 123 3 10 chr5 169593250 169593560 -33491972 - AluJb SINE Alu -4 308 1 593 128 0 0 chr5 169593604 169593690 -33491842 + AluS SINE Alu 2 87 -226 190 258 65 16 chr5 169593815 169593877 -33491655 + L2 LINE L2 3155 3219 -53 944 98 8 0 chr5 169593879 169594011 -33491521 + AluSp/q SINE Alu 181 313 0 720 232 54 93 chr5 169594184 169594630 -33490902 + L1MEd LINE L1 570 997 -5122 2427 94 0 0 chr5 169594630 169594927 -33490605 + AluSg SINE Alu 1 297 -13 720 232 54 93 chr5 169594927 169594962 -33490570 + L1MEd LINE L1 997 1032 -5087 243 333 71 14 chr5 169595129 169595339 -33490193 + L3 LINE CR1 1150 1371 -206 198 0 0 0 chr5 169595348 169595370 -33490162 + (TTCC)n Simple_repeat Simple_repeat 2 23 0 1703 194 23 10 chr5 169595481 169595785 -33489747 - AluJo SINE Alu -4 308 1 2376 100 3 3 chr5 169595795 169596104 -33489428 - AluSq SINE Alu -4 309 1 279 289 84 0 chr5 169596104 169596187 -33489345 + L3 LINE CR1 1369 1458 -119 1225 149 53 4 chr5 169596358 169596614 -33488918 - MER33 DNA MER1_type -22 302 34 412 257 37 9 chr5 169596614 169596723 -33488809 + MLT1J LTR MaLR 1 112 -399 525 241 13 63 chr5 169596791 169596949 -33488583 + MLT1J LTR MaLR 96 245 -266 407 85 287 21 chr5 169597128 169597222 -33488310 - MER5A DNA MER1_type 0 189 71 279 0 0 0 chr5 169597222 169597253 -33488279 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 502 146 25 13 chr5 169597254 169597412 -33488120 + CT-rich Low_complexity Low_complexity 1 160 0 648 192 16 0 chr5 169597412 169597711 -33487821 - FLAM_C SINE Alu 0 301 1 420 178 41 0 chr5 169597712 169597785 -33487747 - MER5A DNA MER1_type -113 76 1 250 178 164 14 chr5 169597800 169597873 -33487659 + L2 LINE L2 3217 3300 -13 711 223 57 31 chr5 169597881 169598074 -33487458 - MIR SINE MIR -57 205 8 284 299 36 22 chr5 169598303 169598440 -33487092 + MIR3 SINE MIR 49 187 -21 1283 151 49 77 chr5 169598548 169598765 -33486767 - MER33 DNA MER1_type -2270 315 108 2366 89 7 0 chr5 169598765 169599057 -33486475 - AluSx SINE Alu -18 294 1 1283 151 49 77 chr5 169599057 169599163 -33486369 - MER33 DNA MER1_type -2477 108 1 842 232 53 68 chr5 169599173 169599224 -33486308 - MIR SINE MIR -2 260 210 2207 111 7 10 chr5 169599224 169599531 -33486001 - AluSg SINE Alu -4 306 1 842 232 53 68 chr5 169599531 169599742 -33485790 - MIR SINE MIR -52 210 2 2128 127 0 34 chr5 169600023 169600346 -33485186 + AluSx SINE Alu 1 312 0 1715 174 32 0 chr5 169600387 169600668 -33484864 + AluJb SINE Alu 11 300 -12 223 347 0 0 chr5 169600725 169600797 -33484735 + L3 LINE CR1 1307 1378 -199 2235 99 17 0 chr5 169600877 169601170 -33484362 + AluSx SINE Alu 1 298 -14 677 112 0 0 chr5 169601264 169601362 -33484170 - FRAM SINE Alu -10 166 69 2304 110 0 3 chr5 169601403 169601704 -33483828 - AluSq SINE Alu -13 300 1 1700 165 6 54 chr5 169601710 169601889 -33483643 - AluJo SINE Alu -11 301 142 1942 44 151 4 chr5 169601889 169602141 -33483391 - AluY SINE Alu -22 289 1 1700 165 6 54 chr5 169602141 169602277 -33483255 - AluJo SINE Alu -170 142 1 246 271 318 0 chr5 169602278 169602385 -33483147 - MIR SINE MIR -113 149 9 243 286 59 42 chr5 169602398 169602517 -33483015 + L3 LINE CR1 1407 1527 -50 337 207 12 37 chr5 169602681 169602763 -33482769 + MIR SINE MIR 2 81 -181 832 129 0 0 chr5 169603005 169603121 -33482411 - AluJb SINE Alu -196 116 1 305 314 241 27 chr5 169603275 169603511 -33482021 + L2 LINE L2 1857 2041 -1273 2571 56 0 3 chr5 169603511 169603816 -33481716 - AluY SINE Alu -7 304 1 305 314 241 27 chr5 169603816 169604231 -33481301 + L2 LINE L2 2041 2366 -948 2256 99 0 3 chr5 169604231 169604523 -33481009 - AluSg SINE Alu -19 291 1 305 314 241 27 chr5 169604523 169604754 -33480778 + L2 LINE L2 2366 2929 -385 319 142 117 19 chr5 169605384 169605546 -33479986 + (CAGAC)n Simple_repeat Simple_repeat 2 179 0 310 233 0 0 chr5 169605654 169605714 -33479818 + L2 LINE L2 3254 3313 0 1214 279 81 22 chr5 169606062 169606660 -33478872 + L2 LINE L2 2670 3311 -2 720 246 5 27 chr5 169607195 169607382 -33478150 - MIR SINE MIR -10 252 70 2104 119 14 0 chr5 169607428 169607721 -33477811 + AluSx SINE Alu 16 312 0 2100 101 10 14 chr5 169607807 169608103 -33477429 + AluSp SINE Alu 1 295 -18 1089 161 16 21 chr5 169608360 169608552 -33476980 - AluJb SINE Alu 0 312 122 816 177 0 27 chr5 169608574 169608721 -33476811 - FLAM_C SINE Alu 0 143 1 1825 173 30 0 chr5 169608727 169609022 -33476510 - AluJb SINE Alu -3 309 6 1684 169 34 24 chr5 169609028 169609324 -33476208 - AluJo SINE Alu -13 299 1 2125 125 3 3 chr5 169609324 169609620 -33475912 - AluJo SINE Alu -15 297 2 369 237 53 46 chr5 169609628 169609744 -33475788 - L1MC5 LINE L1 -519 7442 7323 1775 160 0 51 chr5 169609744 169610056 -33475476 + AluSg SINE Alu 1 296 -14 369 237 53 46 chr5 169610056 169610070 -33475462 - L1MC5 LINE L1 -638 7323 7311 * 748 291 83 72 chr5 169610059 169610524 -33475008 - L1MC4 LINE L1 -552 7490 7014 1795 161 7 11 chr5 169610524 169610836 -33474696 - AluJo SINE Alu 0 311 1 748 291 83 72 chr5 169610836 169611023 -33474509 - L1MC4 LINE L1 -1028 7014 6830 230 224 79 13 chr5 169611096 169611172 -33474360 + MIR SINE MIR 58 138 -70 2166 106 7 3 chr5 169611590 169611867 -33473665 + AluSx SINE Alu 1 281 -31 387 0 0 0 chr5 169611867 169611910 -33473622 + (CA)n Simple_repeat Simple_repeat 1 43 0 2166 106 7 3 chr5 169611910 169611925 -33473607 + AluSx SINE Alu 281 294 -18 318 236 18 100 chr5 169611937 169611983 -33473549 - HAL1 LINE L1 0 2507 2459 2187 116 0 7 chr5 169611983 169612284 -33473248 + AluSx SINE Alu 1 299 -13 318 236 18 100 chr5 169612284 169612347 -33473185 - HAL1 LINE L1 -48 2459 2407 2175 132 0 19 chr5 169612419 169612737 -33472795 + AluSx SINE Alu 1 312 0 3117 255 153 25 chr5 169612771 169614081 -33471451 - HAL1 LINE L1 -1014 1493 16 2516 153 16 78 chr5 169614097 169614652 -33470880 - L1MB7 LINE L1 -21 6163 5643 2200 106 0 7 chr5 169614675 169614984 -33470548 + AluSx SINE Alu 1 307 0 2045 80 47 15 chr5 169615029 169615094 -33470438 - L1MA5A LINE L1 -100 6197 6136 3863 169 8 78 chr5 169615094 169615239 -33470293 - LTR39 LTR ERV1 0 783 629 1732 180 27 7 chr5 169615239 169615539 -33469993 + AluJb SINE Alu 1 306 -6 3863 169 8 78 chr5 169615539 169615571 -33469961 - LTR39 LTR ERV1 -154 629 596 2591 47 0 7 chr5 169615571 169615871 -33469661 - AluY SINE Alu -13 298 1 3863 169 8 78 chr5 169615871 169616171 -33469361 - LTR39 LTR ERV1 -187 596 277 1596 159 41 26 chr5 169616171 169616334 -33469198 - AluJo SINE Alu -21 291 121 216 0 0 0 chr5 169616334 169616358 -33469174 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1596 159 41 26 chr5 169616358 169616465 -33469067 - AluJo SINE Alu -191 121 17 3863 169 8 78 chr5 169616465 169616755 -33468777 - LTR39 LTR ERV1 -506 277 75 1863 155 3 16 chr5 169616755 169617071 -33468461 - AluJo SINE Alu 0 312 1 3863 169 8 78 chr5 169617071 169617142 -33468390 - LTR39 LTR ERV1 -708 75 1 2045 80 47 15 chr5 169617142 169617415 -33468117 - L1MA5A LINE L1 -161 6136 5848 324 301 122 61 chr5 169617419 169617544 -33467988 - MIR SINE MIR -12 250 105 2651 61 0 6 chr5 169617544 169617856 -33467676 + AluY SINE Alu 1 310 -1 324 301 122 61 chr5 169617856 169617943 -33467589 - MIR SINE MIR -157 105 25 27 0 0 0 chr5 169618031 169618058 -33467474 + AT_rich Low_complexity Low_complexity 1 27 0 2602 223 63 73 chr5 169618138 169618867 -33466665 - MER21B LTR ERV1 -52 811 76 2069 108 43 0 chr5 169618867 169619145 -33466387 - AluSg SINE Alu -20 290 1 2282 126 0 0 chr5 169619147 169619457 -33466075 - AluSx SINE Alu 0 312 3 2602 223 63 73 chr5 169619457 169619543 -33465989 - MER21B LTR ERV1 -788 75 1 319 294 190 0 chr5 169619676 169619839 -33465693 + MIR SINE MIR 57 250 -12 609 279 34 40 chr5 169620036 169620334 -33465198 + MER34B LTR ERV1 270 565 0 410 295 29 22 chr5 169620993 169621132 -33464400 + MIR3 SINE MIR 12 151 -57 2152 141 0 0 chr5 169621294 169621600 -33463932 + AluSx SINE Alu 1 306 -6 218 238 0 0 chr5 169622247 169622289 -33463243 + MIR SINE MIR 84 125 -83 611 220 30 30 chr5 169622390 169622580 -33462952 - MIR SINE MIR -61 147 3 22 0 0 0 chr5 169622861 169622883 -33462649 + AT_rich Low_complexity Low_complexity 1 22 0 402 294 147 0 chr5 169623043 169623227 -33462305 - MIR SINE MIR -13 249 39 476 106 82 0 chr5 169623712 169623765 -33461767 - MSTD LTR MaLR 0 396 332 230 0 33 0 chr5 169623765 169623795 -33461737 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 476 106 82 0 chr5 169623795 169623826 -33461706 - MSTD LTR MaLR -64 332 305 1311 123 0 0 chr5 169623836 169624015 -33461517 - AluSg/x SINE Alu 0 312 134 2468 90 0 0 chr5 169624015 169624314 -33461218 - AluSx SINE Alu -13 299 1 2266 97 7 10 chr5 169624322 169624621 -33460911 - AluSx SINE Alu -14 298 1 320 171 9 82 chr5 169624621 169624763 -33460769 - MLT1A1 LTR MaLR -123 273 86 2167 66 44 7 chr5 169625516 169625789 -33459743 + AluY SINE Alu 1 283 -28 262 0 0 0 chr5 169625789 169625818 -33459714 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 300 287 35 2 chr5 169627031 169627148 -33458384 - MIR SINE MIR -67 141 31 241 242 0 110 chr5 169627436 169627488 -33458044 - MIR3 SINE MIR -37 171 132 2212 100 13 10 chr5 169627488 169627799 -33457733 + AluSx SINE Alu 1 312 0 241 242 0 110 chr5 169627799 169627837 -33457695 - MIR3 SINE MIR -76 132 91 474 313 41 45 chr5 169627855 169628101 -33457431 - L2 LINE L2 -14 3258 3014 293 319 52 0 chr5 169629342 169629449 -33456083 + MIR SINE MIR 37 149 -59 425 277 45 19 chr5 169629478 169629633 -33455899 - L3 LINE CR1 -17 1560 1402 2384 91 0 0 chr5 169629675 169629982 -33455550 - AluSx SINE Alu -5 307 1 218 326 53 8 chr5 169630568 169630700 -33454832 + (TCCA)n Simple_repeat Simple_repeat 1 138 0 774 251 142 36 chr5 169632069 169632456 -33453076 - Charlie8 DNA MER1_type -1899 518 91 205 227 76 15 chr5 169633047 169633113 -33452419 + L2 LINE L2 2981 3050 -222 267 290 40 32 chr5 169633857 169633981 -33451551 - MIR SINE MIR -11 251 127 192 200 0 0 chr5 169635159 169635204 -33450328 + T-rich Low_complexity Low_complexity 1 45 0 1946 148 3 0 chr5 169635337 169635635 -33449897 + AluJb SINE Alu 1 299 -13 404 256 60 15 chr5 169635696 169635829 -33449703 + MER113 DNA MER1_type? 38 176 -345 294 316 93 29 chr5 169636307 169636384 -33449148 + MIR3 SINE MIR 37 108 -100 1554 87 23 5 chr5 169636384 169636603 -33448929 - AluSg/x SINE Alu -9 301 79 294 316 93 29 chr5 169636603 169636664 -33448868 + MIR3 SINE MIR 108 184 -24 525 301 74 6 chr5 169637610 169637786 -33447746 + MIR3 SINE MIR 19 206 -2 2230 98 7 3 chr5 169638618 169638924 -33446608 - AluSq SINE Alu -6 307 1 201 325 48 12 chr5 169639155 169639238 -33446294 - MIR SINE MIR -67 141 56 184 297 80 65 chr5 169639440 169639539 -33445993 + MER5A DNA MER1_type 28 131 -58 1681 188 10 0 chr5 169639539 169639827 -33445705 - AluJo SINE Alu -21 291 1 184 297 80 65 chr5 169639827 169639865 -33445667 + MER5A DNA MER1_type 131 167 -22 229 347 82 68 chr5 169641167 169641314 -33444218 - MIR3 SINE MIR -7 201 53 386 353 73 10 chr5 169641646 169641850 -33443682 - MIR SINE MIR 0 262 46 190 260 249 48 chr5 169642402 169642756 -33442776 + L2 LINE L2 2837 3261 -52 180 310 0 17 chr5 169642964 169643022 -33442510 + MIR3 SINE MIR 5 61 -147 226 303 153 22 chr5 169644124 169644398 -33441134 + L1ME4a LINE L1 5754 6063 -58 246 105 0 0 chr5 169644429 169644467 -33441065 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 849 136 0 8 chr5 169644481 169644599 -33440933 - FLAM_C SINE Alu -15 118 2 1814 111 46 4 chr5 169644620 169644900 -33440632 - AluSx SINE Alu -17 295 4 570 346 70 18 chr5 169644999 169645285 -33440247 - L3 LINE CR1 0 1577 1277 191 293 134 4 chr5 169646089 169646210 -33439322 - MER5A DNA MER1_type -14 164 26 575 248 170 42 chr5 169646214 169646638 -33438894 + L1MC5 LINE L1 7452 7929 -32 211 303 131 0 chr5 169647481 169647580 -33437952 + MIR SINE MIR 42 153 -55 182 309 53 43 chr5 169647996 169648090 -33437442 + MER5B DNA MER1_type 27 121 -57 * 355 319 7 47 chr5 169648081 169648260 -33437272 - MIR3 SINE MIR -33 175 7 590 167 10 0 chr5 169648390 169648492 -33437040 - L1MA8 LINE L1 -14 6277 6175 471 288 7 42 chr5 169649084 169649275 -33436257 + MIR SINE MIR 6 188 -65 214 296 66 72 chr5 169649353 169649505 -33436027 + L3 LINE CR1 1422 1572 -5 285 345 58 0 chr5 169649833 169649970 -33435562 + MIR SINE MIR 16 163 -62 425 353 7 13 chr5 169650053 169650203 -33435329 - MIR SINE MIR -97 165 17 308 198 93 0 chr5 169651085 169651171 -33434361 - Charlie8 DNA MER1_type -2244 173 80 359 256 26 17 chr5 169651177 169651294 -33434238 + MLT1L LTR MaLR 9 126 -489 1535 128 121 4 chr5 169651382 169651647 -33433885 - AluSx SINE Alu -16 296 1 236 327 198 0 chr5 169652074 169652236 -33433296 + L2 LINE L2 2996 3189 -83 2248 82 0 23 chr5 169652529 169652834 -33432698 - AluSg SINE Alu -12 298 1 2314 103 7 0 chr5 169653461 169653771 -33431761 - AluSq SINE Alu -1 312 1 758 309 52 0 chr5 169654699 169654929 -33430603 + MIR SINE MIR 3 244 -18 497 249 226 0 chr5 169654955 169655136 -33430396 + MLT1J LTR MaLR 73 294 -217 559 219 25 0 chr5 169655576 169655736 -33429796 + L1M4 LINE L1 2742 2905 -3241 253 298 211 6 chr5 169656176 169656347 -33429185 - MIR SINE MIR -25 237 32 380 278 60 0 chr5 169656394 169656527 -33429005 + L2 LINE L2 2906 3046 -226 220 316 197 48 chr5 169659386 169659614 -33425918 + L2 LINE L2 2696 2957 -357 936 161 291 30 chr5 169660220 169660325 -33425207 + AluYa8 SINE Alu 1 77 -223 207 0 0 0 chr5 169660325 169660348 -33425184 + (CA)n Simple_repeat Simple_repeat 2 24 0 936 161 291 30 chr5 169660348 169660472 -33425060 + AluYa8 SINE Alu 77 290 -10 313 250 155 14 chr5 169660611 169660759 -33424773 + L2 LINE L2 2920 3088 -225 298 325 101 11 chr5 169661639 169661827 -33423705 - MIR SINE MIR -50 212 8 275 289 67 10 chr5 169661940 169662044 -33423488 + MIR SINE MIR 33 142 -66 583 291 146 35 chr5 169662389 169662732 -33422800 + L2 LINE L2 2489 2869 -445 811 165 0 0 chr5 169662752 169662873 -33422659 - AluJb SINE Alu -189 123 3 2100 114 7 0 chr5 169662904 169663193 -33422339 + AluSx SINE Alu 1 291 -21 208 209 119 30 chr5 169663197 169663264 -33422268 + L2 LINE L2 2895 2967 -305 288 263 150 0 chr5 169663358 169663438 -33422094 + L2 LINE L2 3202 3293 -20 302 337 49 19 chr5 169663572 169663777 -33421755 + L2 LINE L2 2906 3116 -156 434 281 132 18 chr5 169664875 169665042 -33420490 + MIR SINE MIR 4 189 -73 400 235 24 0 chr5 169665281 169665366 -33420166 + L2 LINE L2 3186 3272 0 346 238 98 16 chr5 169665412 169665541 -33419991 - MIR SINE MIR -62 146 44 578 289 78 0 chr5 169665768 169665948 -33419584 + MER117 DNA MER1_type 4 197 0 2299 92 0 0 chr5 169666242 169666536 -33418996 - AluY SINE Alu -17 294 1 320 300 0 29 chr5 169666712 169666852 -33418680 - L1MC5 LINE L1 -111 7850 7715 1342 155 0 14 chr5 169666867 169667080 -33418452 - AluJo SINE Alu -17 295 86 1878 155 13 16 chr5 169667091 169667400 -33418132 - AluJb SINE Alu -4 308 1 543 153 9 45 chr5 169667431 169667542 -33417990 + FLAM_A SINE Alu 35 141 -1 1569 129 45 100 chr5 169667859 169668170 -33417362 + AluSq SINE Alu 5 298 -15 754 221 0 0 chr5 169668216 169668347 -33417185 + FLAM_A SINE Alu 1 131 -2 235 235 185 17 chr5 169668657 169668776 -33416756 + MER5A DNA MER1_type 1 139 -50 209 250 0 98 chr5 169668745 169668837 -33416695 + L2 LINE L2 3207 3289 -24 * 359 313 224 3 chr5 169669431 169669725 -33415807 + L2 LINE L2 2911 3269 -44 214 264 174 16 chr5 169669988 169670109 -33415423 + L2 LINE L2 3158 3297 -16 435 351 52 0 chr5 169670147 169670301 -33415231 - MIR SINE MIR -45 217 56 528 270 195 15 chr5 169670510 169670710 -33414822 - L3 LINE CR1 -2 1575 1340 1998 148 7 3 chr5 169671274 169671579 -33413953 + AluJo SINE Alu 1 306 -6 241 354 69 7 chr5 169672078 169672222 -33413310 + MIR SINE MIR 92 244 -18 954 264 72 36 chr5 169672226 169672589 -33412943 + L2 LINE L2 2849 3224 -89 2175 118 0 0 chr5 169672949 169673245 -33412287 - AluSx SINE Alu -16 296 1 668 112 0 20 chr5 169673265 169673363 -33412169 - FRAM SINE Alu -21 155 60 2204 111 0 0 chr5 169673457 169673755 -33411777 - AluSx SINE Alu -14 298 1 266 242 42 21 chr5 169673766 169673861 -33411671 + L2 LINE L2 3123 3219 -94 959 124 0 14 chr5 169674800 169674945 -33410587 - FLAM_C SINE Alu 0 143 1 219 36 0 0 chr5 169675150 169675178 -33410354 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2125 118 10 0 chr5 169675194 169675498 -33410034 - AluSx SINE Alu -5 307 1 739 307 123 24 chr5 169675498 169675922 -33409610 - L2 LINE L2 -13 3300 2835 613 168 73 37 chr5 169675927 169676010 -33409522 + MER45A DNA AcHobo 1 80 -1501 2141 116 0 6 chr5 169676010 169676321 -33409211 - AluSx SINE Alu -3 309 1 613 168 73 37 chr5 169676321 169676404 -33409128 + MER45A DNA AcHobo 80 178 0 564 227 67 80 chr5 169676775 169677013 -33408519 + MIR SINE MIR 27 261 -1 1246 71 0 0 chr5 169677013 169677167 -33408365 + AluSq SINE Alu 1 154 -159 432 94 47 0 chr5 169677170 169677234 -33408298 + Alu SINE Alu 227 293 -18 291 306 24 40 chr5 169677276 169677400 -33408132 + MIR SINE MIR 66 187 -75 193 271 0 0 chr5 169677729 169677777 -33407755 + L2 LINE L2 1378 1425 -1889 2198 112 0 3 chr5 169678001 169678314 -33407218 + AluSx SINE Alu 1 312 0 725 297 65 4 chr5 169678337 169678566 -33406966 + MIR SINE MIR 20 262 0 357 205 0 3 chr5 169679305 169679399 -33406133 + MIR SINE MIR 56 141 -67 1777 181 3 3 chr5 169679399 169679703 -33405829 + AluJo SINE Alu 1 304 -8 1699 193 7 3 chr5 169680077 169680373 -33405159 + MLT1A1 LTR MaLR 1 297 -68 2337 95 0 0 chr5 169680373 169680678 -33404854 + AluSx SINE Alu 1 305 -7 1206 140 0 0 chr5 169680679 169680857 -33404675 + AluSg/x SINE Alu 132 309 -1 355 100 114 0 chr5 169680859 169680929 -33404603 + MLT1A1 LTR MaLR 288 365 0 216 308 44 11 chr5 169681145 169681236 -33404296 + MIR3 SINE MIR 92 185 -23 2455 84 0 49 chr5 169681713 169682080 -33403452 - L1PA8 LINE L1 -2 6170 5822 1706 67 11 81 chr5 169682080 169682232 -33403300 + L1P4 LINE L1 5523 5647 -521 2132 106 14 0 chr5 169682232 169682524 -33403008 + AluSx SINE Alu 1 296 -16 1706 67 11 81 chr5 169682524 169682655 -33402877 + L1P4 LINE L1 5647 5786 -382 1043 170 33 9 chr5 169682787 169682999 -33402533 + MER33 DNA MER1_type 1 217 -107 1595 169 14 17 chr5 169682999 169683018 -33402514 - AluJb SINE Alu -13 299 281 213 65 0 0 chr5 169683018 169683049 -33402483 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1595 169 14 17 chr5 169683049 169683319 -33402213 - AluJb SINE Alu -31 281 11 1951 100 38 7 chr5 169683345 169683636 -33401896 - AluSg SINE Alu -10 300 1 * 2093 110 0 35 chr5 169683636 169683953 -33401579 - AluSq SINE Alu -7 306 1 733 154 0 0 chr5 169684020 169684124 -33401408 - AluJb SINE Alu -207 105 2 1692 179 6 19 chr5 169684126 169684439 -33401093 - AluJo SINE Alu -3 309 1 440 156 0 0 chr5 169684439 169684535 -33400997 + MER33 DNA MER1_type 249 344 -19 2269 75 0 29 chr5 169684535 169684842 -33400690 - AluSg SINE Alu -12 298 1 309 360 55 31 chr5 169685257 169685546 -33399986 - L3 LINE CR1 -8 1569 1274 182 261 63 36 chr5 169686063 169686174 -33399358 - L2 LINE L2 -211 3061 2948 369 0 0 0 chr5 169686280 169686321 -33399211 + (TG)n Simple_repeat Simple_repeat 1 41 0 447 63 0 0 chr5 169686321 169686384 -33399148 + (GA)n Simple_repeat Simple_repeat 2 64 0 2158 83 3 14 chr5 169686448 169686763 -33398769 + AluSq SINE Alu 1 312 0 426 263 179 6 chr5 169686767 169686946 -33398586 - MIR SINE MIR -32 230 21 185 307 40 0 chr5 169687373 169687448 -33398084 + MIR SINE MIR 55 132 -76 2292 57 0 0 chr5 169687448 169687759 -33397773 - AluY SINE Alu 0 312 2 197 283 11 98 chr5 169688597 169688689 -33396843 + MIR SINE MIR 117 200 -62 1115 105 0 73 chr5 169688713 169688904 -33396628 - AluY SINE Alu 0 311 135 1581 93 0 57 chr5 169690111 169690358 -33395174 - AluY SINE Alu 0 311 79 386 119 0 15 chr5 169690360 169690427 -33395105 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 788 266 9 14 chr5 169690427 169690645 -33394887 - AluSg/x SINE Alu 0 310 94 1927 95 44 4 chr5 169691112 169691232 -33394300 + AluSq SINE Alu 1 115 -196 226 0 59 0 chr5 169691232 169691266 -33394266 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1927 95 44 4 chr5 169691266 169691445 -33394087 + AluSq SINE Alu 115 311 0 231 194 69 42 chr5 169691785 169691857 -33393675 + MIR SINE MIR 46 119 -89 396 0 0 0 chr5 169692083 169692127 -33393405 + (TG)n Simple_repeat Simple_repeat 2 45 0 847 124 0 0 chr5 169692574 169692695 -33392837 + AluJo/FLAM SINE Alu 1 121 -191 2306 84 0 0 chr5 169692695 169692994 -33392538 - AluSq SINE Alu -13 300 2 815 158 0 0 chr5 169692996 169693116 -33392416 - AluJb SINE Alu -15 297 178 411 234 44 37 chr5 169693433 169693584 -33391948 - MIR SINE MIR -62 146 9 307 359 7 14 chr5 169693926 169694071 -33391461 - MIR3 SINE MIR -59 149 6 675 312 53 4 chr5 169694111 169694358 -33391174 - MIR SINE MIR 0 262 4 233 340 50 0 chr5 169694591 169694691 -33390841 + MIR3 SINE MIR 83 187 -21 865 241 33 41 chr5 169695443 169695482 -33390050 - MIR SINE MIR -14 248 210 2173 112 3 13 chr5 169695482 169695794 -33389738 - AluSp SINE Alu -3 310 2 865 241 33 41 chr5 169695794 169695999 -33389533 - MIR SINE MIR -52 210 6 1058 257 134 25 chr5 169696473 169697329 -33388203 + L2 LINE L2 2356 3311 -2 355 266 47 23 chr5 169697407 169697535 -33387997 - L3 LINE CR1 -639 938 808 299 313 37 30 chr5 169698028 169698162 -33387370 + MIR3 SINE MIR 6 140 -68 192 233 11 89 chr5 169698690 169698780 -33386752 + MER5A DNA MER1_type 78 160 -29 651 288 234 0 chr5 169699541 169699815 -33385717 - MER102b DNA MER1_type -3 338 1 186 330 17 25 chr5 169699823 169699941 -33385591 - L2 LINE L2 -160 3112 2996 201 293 67 0 chr5 169700489 169700564 -33384968 - MIR SINE MIR -72 136 57 668 254 88 12 chr5 169700566 169700806 -33384726 - MIR SINE MIR -3 259 2 310 288 119 0 chr5 169701496 169701614 -33383918 + MIR3 SINE MIR 74 205 -3 2236 91 3 22 chr5 169701628 169701946 -33383586 + AluSx SINE Alu 1 312 0 300 330 30 0 chr5 169702352 169702452 -33383080 + MIR SINE MIR 49 151 -57 810 180 0 0 chr5 169702594 169702722 -33382810 - FLAM_A SINE Alu -4 129 2 202 337 36 0 chr5 169702762 169702845 -33382687 + MIR SINE MIR 77 162 -100 327 196 91 105 chr5 169703091 169703234 -33382298 + MIR SINE MIR 111 251 -11 2331 96 0 0 chr5 169703271 169703584 -33381948 + AluSq SINE Alu 1 313 0 1628 185 17 3 chr5 169703590 169703892 -33381640 + AluJb SINE Alu 1 306 -6 293 253 96 68 chr5 169704372 169704518 -33381014 - MIR3 SINE MIR -55 153 4 949 206 145 7 chr5 169704633 169704909 -33380623 - MER113 DNA MER1_type? -108 413 100 1907 151 7 3 chr5 169705036 169705340 -33380192 - AluJo SINE Alu -7 305 1 2201 108 0 13 chr5 169705634 169705941 -33379591 - AluSx SINE Alu -9 303 1 392 276 30 15 chr5 169706825 169706959 -33378573 - MIR SINE MIR -23 239 104 514 257 29 29 chr5 169706997 169707168 -33378364 + MIR SINE MIR 73 243 -19 187 224 269 0 chr5 169707164 169707231 -33378301 - MIR SINE MIR -70 192 108 * 761 280 147 34 chr5 169708025 169708613 -33376919 - L2 LINE L2 0 3272 2624 202 367 0 17 chr5 169709354 169709474 -33376058 + MIR SINE MIR 17 134 -74 613 245 87 27 chr5 169709520 169709546 -33375986 + MIR SINE MIR 54 77 -185 1283 120 107 58 chr5 169709546 169709771 -33375761 + MER46A DNA MER2_type 1 236 0 613 245 87 27 chr5 169709771 169709928 -33375604 + MIR SINE MIR 77 248 -14 428 297 182 5 chr5 169710154 169710363 -33375169 - MIR SINE MIR -4 258 13 675 300 83 0 chr5 169710842 169711072 -33374460 + MIR SINE MIR 6 254 -8 227 158 0 0 chr5 169711284 169711322 -33374210 + MER103 DNA DNA 50 87 -79 822 301 119 26 chr5 169711505 169711884 -33373648 + L2 LINE L2 2899 3312 -1 426 259 8 53 chr5 169712199 169712330 -33373202 + MIR SINE MIR 20 144 -118 555 267 14 27 chr5 169712489 169712635 -33372897 - MIR SINE MIR -8 254 111 537 272 38 43 chr5 169713699 169713883 -33371649 + MIR SINE MIR 80 262 0 1850 125 80 0 chr5 169714737 169715024 -33370508 - AluSp SINE Alu -3 310 1 188 237 0 0 chr5 169715158 169715196 -33370336 + MIR3 SINE MIR 161 198 -10 492 286 126 42 chr5 169715224 169715373 -33370159 + L1ME4a LINE L1 5620 5755 -366 2157 109 0 0 chr5 169715373 169715666 -33369866 + AluSx SINE Alu 1 293 -19 492 286 126 42 chr5 169715666 169715921 -33369611 + L1ME4a LINE L1 5755 6058 -63 273 237 246 8 chr5 169715949 169716067 -33369465 + MIR3 SINE MIR 55 200 -8 260 276 23 30 chr5 169716210 169716342 -33369190 - L2 LINE L2 -220 3052 2898 1986 169 12 48 chr5 169716731 169717010 -33368522 + L1MC1 LINE L1 5923 6184 -149 1434 180 50 7 chr5 169717010 169717293 -33368239 + AluJo SINE Alu 1 295 -17 1986 169 12 48 chr5 169717293 169717427 -33368105 + L1MC1 LINE L1 6184 6321 -12 384 22 0 0 chr5 169717428 169717473 -33368059 + (CA)n Simple_repeat Simple_repeat 1 45 0 2048 127 0 0 chr5 169717489 169717773 -33367759 + AluSx SINE Alu 6 289 -23 884 244 62 0 chr5 169717853 169718062 -33367470 + MIR SINE MIR 12 233 -29 229 325 68 8 chr5 169718822 169718939 -33366593 + L2 LINE L2 2931 3054 -218 335 294 32 8 chr5 169719005 169719131 -33366401 + Charlie8 DNA MER1_type 1 129 -2288 235 354 35 14 chr5 169720002 169720146 -33365386 - L3 LINE CR1 -225 1352 1206 377 239 186 78 chr5 169720363 169720530 -33365002 + MIR SINE MIR 46 230 -32 185 333 0 0 chr5 169721813 169721867 -33363665 - L2 LINE L2 -4 3309 3256 201 121 0 0 chr5 169722417 169722450 -33363082 + (A)n Simple_repeat Simple_repeat 1 33 0 482 224 189 33 chr5 169722485 169722696 -33362836 + MIR SINE MIR 9 258 -4 189 247 49 49 chr5 169722723 169722804 -33362728 + L2 LINE L2 1350 1430 -1884 * 415 237 0 21 chr5 169722753 169722850 -33362682 - MIR SINE MIR -108 154 60 239 241 18 45 chr5 169723332 169723444 -33362088 + (CCCG)n Simple_repeat Simple_repeat 4 112 0 25 31 0 0 chr5 169723453 169723485 -33362047 + GC_rich Low_complexity Low_complexity 1 32 0 234 308 25 17 chr5 169723672 169723792 -33361740 + C-rich Low_complexity Low_complexity 6 126 0 35 54 0 0 chr5 169724038 169724094 -33361438 + GC_rich Low_complexity Low_complexity 1 56 0 262 280 117 29 chr5 169724789 169724961 -33360571 - MIR3 SINE MIR -71 137 10 2422 62 0 7 chr5 169725119 169725423 -33360109 + AluSg SINE Alu 1 302 -8 1931 101 23 46 chr5 169725467 169725773 -33359759 + AluSx SINE Alu 1 299 -13 2094 116 3 0 chr5 169725773 169726065 -33359467 + AluSg SINE Alu 1 293 -17 1927 91 91 0 chr5 169726065 169726341 -33359191 + AluY SINE Alu 1 301 -10 234 294 54 43 chr5 169726365 169726457 -33359075 - MER5A DNA MER1_type -29 160 68 207 277 0 31 chr5 169727034 169727099 -33358433 - L2 LINE L2 -25 3247 3185 2376 95 0 0 chr5 169727245 169727543 -33357989 - AluSx SINE Alu -17 295 1 206 323 118 0 chr5 169727572 169727665 -33357867 - L2 LINE L2 -238 3034 2931 236 300 209 13 chr5 169728242 169728516 -33357016 + L2 LINE L2 2212 2431 -883 2268 113 0 7 chr5 169728516 169728826 -33356706 - AluSg1 SINE Alu -1 308 1 236 300 209 13 chr5 169728826 169728934 -33356598 + L2 LINE L2 2431 2669 -645 935 234 28 14 chr5 169729131 169729349 -33356183 + MIR SINE MIR 21 241 -21 1834 171 75 6 chr5 169729358 169729680 -33355852 + MER2 DNA MER2_type 1 344 0 1679 167 44 0 chr5 169729726 169730020 -33355512 - AluJo SINE Alu -5 307 1 535 181 194 19 chr5 169730020 169730175 -33355357 - L1MD3 LINE L1 -185 7810 7629 1391 19 0 0 chr5 169730185 169730339 -33355193 - L1PA4 LINE L1 -2 6153 6000 225 224 0 20 chr5 169730435 169730484 -33355048 + L2 LINE L2 2920 2967 -346 313 221 44 15 chr5 169730823 169730891 -33354641 + L1MC4a LINE L1 5831 5900 -1908 1213 188 37 50 chr5 169731759 169732057 -33353475 + AluJb SINE Alu 1 294 -18 373 253 61 20 chr5 169732232 169732331 -33353201 + MER20B DNA MER1_type 61 163 -620 339 129 54 118 chr5 169732794 169732830 -33352702 - MER58 DNA MER1_type 0 2420 2383 1704 168 10 10 chr5 169732830 169733134 -33352398 + AluJb SINE Alu 1 304 -8 339 129 54 118 chr5 169733134 169733190 -33352342 - MER58 DNA MER1_type -37 2383 129 337 308 100 46 chr5 169733266 169733656 -33351876 + L2 LINE L2 2837 3247 -25 180 241 37 19 chr5 169734076 169734130 -33351402 - L2 LINE L2 -73 3199 3145 346 256 91 32 chr5 169734162 169734349 -33351183 - MIR SINE MIR -51 211 17 249 261 34 23 chr5 169735648 169735736 -33349796 - MIR SINE MIR -103 105 17 311 292 0 0 chr5 169736249 169736338 -33349194 - MIR SINE MIR -51 211 123 496 141 82 0 chr5 169737146 169737231 -33348301 + FLAM_A SINE Alu 10 101 -41 254 233 87 58 chr5 169737322 169737425 -33348107 - MIR SINE MIR -43 219 114 1895 117 11 18 chr5 169737522 169737803 -33347729 - AluY SINE Alu -32 279 1 272 148 50 30 chr5 169737911 169738012 -33347520 + (TA)n Simple_repeat Simple_repeat 2 104 0 380 42 0 0 chr5 169738019 169738067 -33347465 + AluY SINE Alu 249 296 -6 2287 81 7 0 chr5 169738100 169738395 -33347137 - AluSq SINE Alu -16 297 1 296 206 76 33 chr5 169738416 169738508 -33347024 - L1M LINE L1 -2387 5421 5326 406 178 33 11 chr5 169738784 169738874 -33346658 + MIR SINE MIR 66 157 -105 235 77 51 0 chr5 169738892 169738931 -33346601 - AluSx SINE Alu -3 297 257 1334 101 0 67 chr5 169738931 169739140 -33346392 - AluSx SINE Alu -117 195 1 1649 148 58 0 chr5 169739178 169739435 -33346097 + AluJb SINE Alu 5 276 -36 2253 95 0 3 chr5 169739475 169739769 -33345763 - AluSx SINE Alu -19 293 1 196 171 0 0 chr5 169739779 169739814 -33345718 - MIR SINE MIR -11 251 217 550 339 19 0 chr5 169739825 169740050 -33345482 - L2 LINE L2 -243 3029 2800 3218 231 84 90 chr5 169740153 169740347 -33345185 - L2 LINE L2 -3 3310 3116 2220 128 0 0 chr5 169740347 169740659 -33344873 + AluSq SINE Alu 1 312 -1 3218 231 84 90 chr5 169740659 169740783 -33344749 - L2 LINE L2 -197 3116 2993 6196 117 31 19 chr5 169740783 169741740 -33343792 - LTR5 LTR ERVK 0 969 1 3218 231 84 90 chr5 169741740 169742218 -33343314 - L2 LINE L2 -320 2993 2513 283 30 0 0 chr5 169742218 169742251 -33343281 + U2 snRNA snRNA 1 33 -155 2145 123 33 0 chr5 169742259 169742561 -33342971 + AluSx SINE Alu 1 312 0 3218 231 84 90 chr5 169742561 169743283 -33342249 - L2 LINE L2 -807 2506 1781 2126 125 0 0 chr5 169743283 169743600 -33341932 - AluSc SINE Alu 0 317 1 3218 231 84 90 chr5 169743600 169743612 -33341920 - L2 LINE L2 -1532 1781 1770 1881 98 91 21 chr5 169743612 169743899 -33341633 - AluSx SINE Alu -5 307 1 866 153 0 0 chr5 169743903 169744027 -33341505 - FLAM_C SINE Alu -7 126 3 3218 231 84 90 chr5 169744027 169744356 -33341176 - L2 LINE L2 -1546 1767 1421 323 233 217 8 chr5 169744376 169744505 -33341027 - MIR SINE MIR -79 183 28 201 151 75 57 chr5 169744739 169744792 -33340740 - MIR SINE MIR -77 131 78 5521 117 39 23 chr5 169745517 169746467 -33339065 - MER4-int LTR ERV1 -1819 4779 3815 * 9599 99 148 115 chr5 169746465 169748613 -33336919 - MER4-int LTR ERV1 -2922 3676 1437 2248 118 0 6 chr5 169748613 169748928 -33336604 + AluSq SINE Alu 1 313 0 9599 99 148 115 chr5 169748928 169749220 -33336312 - MER4-int LTR ERV1 -5161 1437 1156 222 91 0 0 chr5 169749221 169749254 -33336278 + (CA)n Simple_repeat Simple_repeat 2 34 0 1473 96 78 4 chr5 169749254 169749484 -33336048 - MER4-int LTR ERV1 -5487 1111 865 237 146 0 49 chr5 169749486 169749527 -33336005 - LTR49 LTR ERV1 -284 311 273 2707 86 152 11 chr5 169749528 169750039 -33335493 - MER4-int LTR ERV1 -5781 817 169 279 114 23 0 chr5 169750059 169750103 -33335429 - MER4A LTR ERV1 -359 305 261 642 131 0 10 chr5 169750103 169750202 -33335330 - MER4A LTR ERV1 -566 98 1 282 261 0 0 chr5 169750206 169750271 -33335261 + MLT1B LTR MaLR 58 122 -252 724 181 14 21 chr5 169750285 169750442 -33335090 + MLT1B LTR MaLR 252 390 0 5354 198 102 33 chr5 169750442 169750470 -33335062 + L1MDa LINE L1 411 436 -6104 2131 118 3 34 chr5 169750470 169750792 -33334740 + AluSx SINE Alu 1 312 0 5354 198 102 33 chr5 169750792 169752140 -33333392 + L1MDa LINE L1 436 1882 -4658 1865 186 150 8 chr5 169752144 169752623 -33332909 + L1M3e LINE L1 1 547 -6483 335 294 15 75 chr5 169752625 169752826 -33332706 + L1 LINE L1 4015 4203 -1943 332 319 156 8 chr5 169752984 169753247 -33332285 + L1MC4a LINE L1 5610 5911 -1897 1710 183 7 16 chr5 169753401 169753707 -33331825 - AluJo SINE Alu -7 305 3 370 359 4 22 chr5 169753758 169753989 -33331543 + L1 LINE L1 4309 4535 -1611 1860 125 21 11 chr5 169754695 169754976 -33330556 + MER49 LTR ERV1 179 462 -461 22 0 0 0 chr5 169756166 169756188 -33329344 + AT_rich Low_complexity Low_complexity 1 22 0 1969 159 7 0 chr5 169757171 169757479 -33328053 + AluSx SINE Alu 1 310 -2 644 219 19 6 chr5 169758243 169758403 -33327129 - L1P LINE L1 -1061 5085 4924 727 222 89 82 chr5 169758404 169758809 -33326723 - L1MC5 LINE L1 -785 7176 6769 254 349 72 13 chr5 169758844 169758996 -33326536 + MLT1H LTR MaLR 119 279 -270 207 0 0 0 chr5 169759142 169759165 -33326367 + (ATG)n Simple_repeat Simple_repeat 2 24 0 316 260 94 16 chr5 169759227 169759419 -33326113 - L1MEc LINE L1 -4036 2360 2154 1639 164 15 0 chr5 169759433 169759702 -33325830 + Tigger1 DNA MER2_type 1 273 -2145 807 144 75 7 chr5 169759702 169759848 -33325684 + L1 LINE L1 3535 3690 -2456 244 296 12 25 chr5 169760548 169760629 -33324903 + MER81 DNA DNA 35 114 0 1694 205 76 65 chr5 169762058 169762609 -33322923 - MER90 LTR ERV1 0 614 58 201 282 99 0 chr5 169762695 169762766 -33322766 - L2 LINE L2 -8 3264 3187 1785 203 49 3 chr5 169763145 169763494 -33322038 - MLT1A1 LTR MaLR 0 365 1 225 191 61 122 chr5 169763581 169763712 -33321820 - L1ME LINE L1 -414 6205 6083 243 88 0 0 chr5 169764223 169764257 -33321275 + (TA)n Simple_repeat Simple_repeat 1 34 0 1172 192 81 4 chr5 169766297 169766656 -33318876 - MSTB1 LTR MaLR 0 432 4 4071 175 66 10 chr5 169766689 169767487 -33318045 - L1MB8 LINE L1 -18 6160 5318 1862 180 41 29 chr5 169767536 169767945 -33317587 + L1M4 LINE L1 4852 5281 -897 273 29 0 0 chr5 169767945 169767979 -33317553 - HSMAR1 DNA Mariner -1253 34 1 1862 180 41 29 chr5 169767979 169768164 -33317368 + L1M4 LINE L1 5281 5462 -716 464 194 111 0 chr5 169768163 169768271 -33317261 - L1MB8 LINE L1 -1139 5007 4888 * 5138 216 79 5 chr5 169768264 169769553 -33315979 - L1ME LINE L1 -1015 5629 4245 634 160 19 0 chr5 169769553 169769659 -33315873 - MER77 LTR ERV1 0 605 498 3587 241 107 68 chr5 169769669 169770172 -33315360 - L1ME LINE L1 -2616 4028 3546 5117 195 57 9 chr5 169770172 169771204 -33314328 - Tigger6a DNA MER2_type -1 1082 1 3587 241 107 68 chr5 169771204 169771920 -33313612 - L1ME LINE L1 -3098 3546 2860 2729 14 0 0 chr5 169771920 169772212 -33313320 - AluYb8 SINE Alu -12 306 15 3587 241 107 68 chr5 169772212 169772778 -33312754 - L1ME LINE L1 -3784 2860 2318 2015 163 77 21 chr5 169772778 169773153 -33312379 - MSTD LTR MaLR 0 396 1 3587 241 107 68 chr5 169773153 169773402 -33312130 - L1ME LINE L1 -4326 2318 2080 2206 126 0 0 chr5 169773402 169773712 -33311820 + AluSg SINE Alu 1 310 0 3587 241 107 68 chr5 169773712 169774625 -33310907 - L1ME LINE L1 -4564 2080 1014 949 9 0 0 chr5 169774660 169774765 -33310767 - AluYa5/8 SINE Alu -6 304 200 34 0 0 0 chr5 169774770 169774804 -33310728 + AT_rich Low_complexity Low_complexity 1 34 0 197 33 33 0 chr5 169775076 169775106 -33310426 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 579 170 21 0 chr5 169775110 169775204 -33310328 - FLAM_C SINE Alu -26 117 22 388 274 16 0 chr5 169777891 169778015 -33307517 + L1M4 LINE L1 4236 4361 -1785 1322 201 87 3 chr5 169778070 169778379 -33307153 - L1MD1 LINE L1 -90 6152 5818 1463 294 27 47 chr5 169778380 169778418 -33307114 + L1M3b LINE L1 1216 1253 -5312 2800 10 0 6 chr5 169778418 169778730 -33306802 + AluYb8 SINE Alu 1 310 -8 1463 294 27 47 chr5 169778730 169778882 -33306650 + L1M3b LINE L1 1253 1406 -5159 2242 97 10 0 chr5 169778882 169779171 -33306361 + AluSp SINE Alu 1 292 -21 1463 294 27 47 chr5 169779171 169779564 -33305968 + L1M3b LINE L1 1406 1811 -4754 9251 224 47 41 chr5 169780220 169781029 -33304503 + L1M3b LINE L1 2148 2951 -4614 376 98 0 0 chr5 169781029 169781080 -33304452 - 5S rRNA rRNA -70 51 1 9251 224 47 41 chr5 169781080 169783213 -33302319 + L1M3b LINE L1 2951 4951 -2614 2539 117 16 0 chr5 169783213 169783582 -33301950 - THE1C LTR MaLR 0 375 1 9251 224 47 41 chr5 169783582 169784607 -33300925 + L1M3b LINE L1 4951 5969 -1596 1497 253 56 42 chr5 169784610 169784870 -33300662 - L1MDa LINE L1 -2734 3806 3551 1943 143 0 14 chr5 169784870 169785157 -33300375 - AluSx SINE Alu -29 283 1 1497 253 56 42 chr5 169785157 169785658 -33299874 - L1MDa LINE L1 -2989 3551 3034 4636 202 91 30 chr5 169785670 169787467 -33298065 - L1MDa LINE L1 -3629 2911 1003 825 246 59 17 chr5 169787803 169788324 -33297208 + L1ME1 LINE L1 5518 6121 -45 470 250 0 7 chr5 169788234 169788374 -33297158 + L1MA10 LINE L1 6191 6329 -5 * 371 289 106 23 chr5 169788506 169788724 -33296808 + L1MEc LINE L1 2023 2258 -4138 342 307 26 0 chr5 169788794 169788908 -33296624 + L1MEc LINE L1 2351 2467 -3748 811 221 47 34 chr5 169789928 169790163 -33295369 - L1ME2 LINE L1 -24 6140 5903 * 822 214 83 40 chr5 169790159 169790411 -33295121 - L1ME2 LINE L1 -1363 4783 4521 857 181 0 7 chr5 169790417 169790561 -33294971 + AluJo SINE Alu 1 143 -169 1096 163 0 32 chr5 169790677 169790867 -33294665 + AluJo SINE Alu 113 296 -16 21 0 0 0 chr5 169790882 169790903 -33294629 + AT_rich Low_complexity Low_complexity 1 21 0 1882 168 0 0 chr5 169791103 169791389 -33294143 + AluSx SINE Alu 1 286 -26 26 0 0 0 chr5 169791393 169791419 -33294113 + AT_rich Low_complexity Low_complexity 1 26 0 281 106 21 0 chr5 169791549 169791596 -33293936 - L1MB2 LINE L1 -5 6166 6119 2030 193 61 11 chr5 169791652 169792113 -33293419 + LTR22B LTR ERVK 1 484 -8 5275 115 7 4 chr5 169792121 169792871 -33292661 + HERVK22 LTR ERVK 1 752 -6085 2499 88 6 12 chr5 169792944 169793285 -33292247 + HERVK22 LTR ERVK 6499 6837 0 1860 205 69 17 chr5 169793285 169793749 -33291783 + LTR22B LTR ERVK 1 488 -4 4123 247 45 19 chr5 169793755 169795205 -33290327 - L1M4 LINE L1 -1329 5403 3916 4052 265 50 24 chr5 169795218 169796992 -33288540 - L1M4 LINE L1 -4516 2137 2 285 328 40 11 chr5 169797046 169797220 -33288312 - L1M3d LINE L1 -5712 179 1 550 275 18 48 chr5 169797221 169797450 -33288082 - L1M4 LINE L1 -1875 4271 4050 2382 259 83 20 chr5 169797456 169798149 -33287383 - L1MEc LINE L1 -5571 825 79 2144 105 31 100 chr5 169798149 169798540 -33286992 + THE1B LTR MaLR 1 364 0 2382 259 83 20 chr5 169798540 169798604 -33286928 - L1MEc LINE L1 -6317 79 20 1719 251 107 21 chr5 169798732 169799245 -33286287 + MLT1E LTR MaLR 15 571 -22 1139 218 15 0 chr5 169799341 169799547 -33285985 - MER82 DNA MER2_type -1 652 444 198 261 130 22 chr5 169799617 169799709 -33285823 + MIR SINE MIR 85 186 -76 321 172 0 0 chr5 169799712 169799776 -33285756 + (TA)n Simple_repeat Simple_repeat 1 64 0 35 0 0 0 chr5 169799799 169799834 -33285698 + AT_rich Low_complexity Low_complexity 1 35 0 233 244 70 0 chr5 169799923 169800009 -33285523 + L1MC4 LINE L1 6621 6712 -1330 24 0 0 0 chr5 169800024 169800048 -33285484 + AT_rich Low_complexity Low_complexity 1 24 0 482 242 0 0 chr5 169800048 169800143 -33285389 - MER82 DNA MER2_type -551 102 8 830 272 131 25 chr5 169800322 169800570 -33284962 - L1MC4a LINE L1 -1933 5875 5655 1915 189 38 112 chr5 169800570 169801178 -33284354 + MLT1F1 LTR MaLR 5 567 0 830 272 131 25 chr5 169801178 169801363 -33284169 - L1MC4a LINE L1 -2153 5655 5396 180 316 18 18 chr5 169801414 169801471 -33284061 + L2 LINE L2 2750 2806 -508 888 263 42 55 chr5 169801670 169802073 -33283459 + MER92A LTR ERV1 6 403 -9 218 313 0 47 chr5 169802431 169802581 -33282951 + CT-rich Low_complexity Low_complexity 2 144 0 187 194 0 0 chr5 169803957 169803988 -33281544 - L2 LINE L2 -5 3267 3237 21 0 0 0 chr5 169804880 169804901 -33280631 + AT_rich Low_complexity Low_complexity 1 21 0 1044 192 62 0 chr5 169805340 169805548 -33279984 + MER58A DNA MER1_type 4 224 0 27 49 0 0 chr5 169805847 169805888 -33279644 + AT_rich Low_complexity Low_complexity 1 41 0 247 217 17 0 chr5 169806161 169806221 -33279311 - L1MC/D LINE L1 -1959 5849 5789 289 213 158 55 chr5 169806239 169806366 -33279166 + MIR SINE MIR 123 262 0 938 197 183 11 chr5 169806510 169806795 -33278737 + MER33 DNA MER1_type 1 324 0 239 267 13 53 chr5 169807323 169807398 -33278134 - L2 LINE L2 -4 3309 3238 268 225 0 42 chr5 169807890 169807961 -33277571 + MIR SINE MIR 88 155 -107 189 281 79 79 chr5 169808447 169808586 -33276946 + MIR3 SINE MIR 67 205 -3 1615 206 15 38 chr5 169808763 169809162 -33276370 - MLT1B LTR MaLR 0 390 1 323 287 52 17 chr5 169813240 169813355 -33272177 + MIR SINE MIR 20 138 -124 439 286 107 30 chr5 169814560 169814923 -33270609 + L1M4 LINE L1 4597 4987 -1159 214 309 0 0 chr5 169815050 169815134 -33270398 + A-rich Low_complexity Low_complexity 1 84 0 665 199 59 7 chr5 169815136 169815272 -33270260 + FRAM SINE Alu 11 153 -23 913 281 100 0 chr5 169815296 169815606 -33269926 + L1M4 LINE L1 3952 4292 -1854 255 310 0 0 chr5 169815629 169815687 -33269845 - MIR SINE MIR -203 59 2 5825 221 117 18 chr5 169816381 169818507 -33267025 + L1MEc LINE L1 1983 4374 -1841 2357 120 28 17 chr5 169818507 169818866 -33266666 + THE1B LTR MaLR 1 363 -1 5825 221 117 18 chr5 169818866 169819238 -33266294 + L1MEc LINE L1 4374 4707 -1508 4748 207 89 18 chr5 169819234 169820963 -33264569 - L1P4 LINE L1 -3156 4428 2545 * 11509 175 15 5 chr5 169820963 169823776 -33261756 + L1P4 LINE L1 4424 7258 -341 6791 205 56 45 chr5 169823820 169825793 -33259739 - L1 LINE L1 -2191 5374 3351 1478 149 9 113 chr5 169825793 169826128 -33259404 - AluJb SINE Alu -1 301 2 6791 205 56 45 chr5 169826128 169826873 -33258659 - L1 LINE L1 -4214 3351 2616 2277 108 0 0 chr5 169826888 169827185 -33258347 - AluSq SINE Alu -16 297 1 287 255 38 66 chr5 169828457 169828563 -33256969 + L2 LINE L2 3170 3272 0 250 225 39 31 chr5 169829202 169829331 -33256201 + (TAA)n Simple_repeat Simple_repeat 3 132 0 180 183 14 28 chr5 169829526 169829597 -33255935 + GA-rich Low_complexity Low_complexity 1 70 0 453 273 13 0 chr5 169829673 169829796 -33255736 - MIR SINE MIR -40 222 99 476 234 0 0 chr5 169830337 169830431 -33255101 + MIR SINE MIR 73 166 -96 3301 90 23 0 chr5 169830431 169830866 -33254666 - MLT2A2 LTR ERVL -8 445 1 36364 82 22 25 chr5 169830866 169835931 -33249601 - HERVL-A2 LTR ERVL 0 5654 606 6640 126 99 60 chr5 169835925 169837831 -33247701 - MER4A-int LTR ERV1 -4569 2029 1 * 492 139 0 0 chr5 169837834 169837906 -33247626 - MER4A LTR ERV1 0 664 593 861 72 0 0 chr5 169837910 169838021 -33247511 + HSMAR1 DNA Mariner 1177 1287 0 1208 108 6 0 chr5 169838246 169838412 -33247120 + HSMAR1 DNA Mariner 398 564 -723 8941 169 28 13 chr5 169838422 169841115 -33244417 + L1PB1 LINE L1 3412 6150 -1 2180 116 0 0 chr5 169842078 169842370 -33243162 + AluSx SINE Alu 1 292 -20 430 268 83 44 chr5 169842501 169842829 -33242703 - L1MEc LINE L1 -3745 2478 2169 237 242 15 0 chr5 169845289 169845355 -33240177 + LTR33 LTR ERVL 331 397 -124 379 317 201 15 chr5 169845379 169845638 -33239894 - MLT1I LTR MaLR -5 404 98 2185 244 92 20 chr5 169845691 169846244 -33239288 + MLT1E LTR MaLR 1 593 0 412 280 56 96 chr5 169846634 169847133 -33238399 + MLT1G1 LTR MaLR 41 561 -34 2168 229 67 29 chr5 169847408 169847992 -33237540 + MER45R DNA AcHobo 343 948 -633 19430 28 8 2 chr5 169848242 169851199 -33234333 + L1PA4 LINE L1 3181 6149 -6 218 125 14 69 chr5 169851202 169851274 -33234258 + (TTAA)n Simple_repeat Simple_repeat 4 71 0 941 145 0 0 chr5 169851364 169851495 -33234037 + FLAM_C SINE Alu 1 131 -2 1851 143 3 11 chr5 169851700 169851986 -33233546 - AluSc SINE Alu -25 284 1 2107 139 0 3 chr5 169852182 169852485 -33233047 - AluSc SINE Alu -7 302 1 23 33 0 0 chr5 169852603 169852633 -33232899 + AT_rich Low_complexity Low_complexity 1 30 0 2567 226 60 39 chr5 169853718 169855739 -33229793 + L1M4c LINE L1 1258 3426 -2956 1088 172 44 15 chr5 169857857 169858061 -33227471 + AluJo SINE Alu 79 288 -24 2368 110 0 0 chr5 169858728 169859037 -33226495 + AluSc SINE Alu 1 309 0 344 301 20 13 chr5 169859050 169859203 -33226329 - L1MEc LINE L1 -4062 2334 2181 294 247 180 72 chr5 169859500 169859694 -33225838 + LTR33 LTR ERVL 307 521 0 2061 110 7 7 chr5 169860531 169860823 -33224709 + AluSc SINE Alu 1 292 -17 7867 104 118 92 chr5 169861698 169863349 -33222183 - pTR5 LTR ERV1 -2 2436 743 237 316 6 34 chr5 169863390 169863567 -33221965 + (CA)n Simple_repeat Simple_repeat 2 173 0 281 200 147 111 chr5 169865572 169865762 -33219770 + MER112 DNA MER1_type 60 256 -4 3237 130 4 13 chr5 169865989 169866043 -33219489 + L1P5 LINE L1 4938 4991 -1160 2310 101 0 3 chr5 169866043 169866349 -33219183 + AluSc SINE Alu 1 305 -4 3237 130 4 13 chr5 169866349 169867071 -33218461 + L1P5 LINE L1 4991 5709 -442 256 291 13 25 chr5 169870094 169870173 -33215359 + LTR16C LTR ERVL 414 491 0 4889 73 5 2 chr5 169870768 169871357 -33214175 + LTR10C LTR ERV1 1 591 0 1055 214 31 45 chr5 169871357 169871646 -33213886 + LTR10C-int LTR ERV1 5 289 -6360 331 194 135 43 chr5 169871811 169871960 -33213572 + LTR10C-int LTR ERV1 502 719 -5930 252 0 0 0 chr5 169871960 169871988 -33213544 + (TA)n Simple_repeat Simple_repeat 2 29 0 304 99 109 40 chr5 169872091 169872192 -33213340 + LTR10C-int LTR ERV1 842 949 -5947 203 281 0 0 chr5 169872435 169872492 -33213040 + A-rich Low_complexity Low_complexity 1 57 0 259 323 0 10 chr5 169872567 169872663 -33212869 + GA-rich Low_complexity Low_complexity 2 96 0 354 190 120 60 chr5 169872663 169872847 -33212685 + HERVKC4 LTR ERVK 2609 2803 -2459 * 4207 84 21 6 chr5 169872731 169873363 -33212169 + HERVI LTR ERV1 1897 2537 -4359 4828 281 75 43 chr5 169873552 169875478 -33210054 + HERVI LTR ERV1 5515 7378 -407 2358 82 3 3 chr5 169875478 169875781 -33209751 + AluY SINE Alu 1 303 -8 233 29 29 0 chr5 169875784 169875818 -33209714 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4828 281 75 43 chr5 169875818 169876074 -33209458 + HERVI LTR ERV1 7379 7771 -14 5297 44 0 0 chr5 169876088 169876679 -33208853 + LTR10C LTR ERV1 1 591 0 2774 257 40 21 chr5 169877139 169878085 -33207447 - L1M4 LINE L1 -2659 3985 3022 354 235 0 0 chr5 169878099 169878180 -33207352 - L1M4 LINE L1 -3824 2820 2740 576 202 101 16 chr5 169878190 169878378 -33207154 - L1M4 LINE L1 -3959 2687 2484 * 5955 168 12 9 chr5 169878350 169879550 -33205982 - L1PA16 LINE L1 0 6664 5469 202 39 0 0 chr5 169879550 169879576 -33205956 + (TTTTG)n Simple_repeat Simple_repeat 1 155 0 2316 72 4 0 chr5 169879576 169879855 -33205677 - AluY SINE Alu -1 305 1 5955 168 12 9 chr5 169879855 169880536 -33204996 - L1PA16 LINE L1 -1194 5470 4778 1607 191 30 8 chr5 169880543 169880910 -33204622 + L1 LINE L1 3913 4287 -1859 270 0 0 0 chr5 169880976 169881006 -33204526 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 427 248 25 8 chr5 169881036 169881157 -33204375 - L1M4 LINE L1 -5763 779 657 3813 145 22 17 chr5 169881208 169881924 -33203608 - L1MA8 LINE L1 -2 6289 5570 318 246 16 56 chr5 169881932 169882058 -33203474 - L1M4 LINE L1 -5880 662 542 353 257 74 10 chr5 169882260 169882462 -33203070 - L1M4 LINE L1 -3103 3043 2829 618 297 69 71 chr5 169882465 169883001 -33202531 - L1M4 LINE L1 -3407 2739 2205 247 316 9 9 chr5 169883020 169883134 -33202398 - L1ME LINE L1 -363 5758 5645 7071 153 37 37 chr5 169883206 169885323 -33200209 - L1MA7 LINE L1 -9 7701 5583 198 0 0 0 chr5 169885330 169885352 -33200180 + (TA)n Simple_repeat Simple_repeat 1 22 0 4487 41 0 2 chr5 169885352 169885885 -33199647 - L1PA5 LINE L1 -12 6142 5609 7071 153 37 37 chr5 169885885 169886192 -33199340 - L1MA7 LINE L1 -2127 5583 5278 4044 175 31 1 chr5 169886196 169886906 -33198626 + MER44D DNA MER2_type 3 605 0 10517 91 9 1 chr5 169887097 169888598 -33196934 + THE1A-int LTR MaLR 69 1580 0 2857 71 3 0 chr5 169888600 169888952 -33196580 + THE1A LTR MaLR 3 355 0 5447 119 12 28 chr5 169888955 169889433 -33196099 - L1MA7 LINE L1 -3734 3831 3347 2315 104 0 0 chr5 169889433 169889731 -33195801 - AluY SINE Alu -13 298 1 5447 119 12 28 chr5 169889731 169890386 -33195146 - L1MA7 LINE L1 -4218 3347 2716 * 11824 181 48 13 chr5 169890379 169892730 -33192802 - L1MA7 LINE L1 -5118 2447 14 4456 243 30 34 chr5 169892869 169893149 -33192383 - L1M4 LINE L1 -1868 4278 3999 1612 130 130 162 chr5 169893149 169893612 -33191920 - MER83 LTR ERV1 0 448 1 4456 243 30 34 chr5 169893612 169895021 -33190511 - L1M4 LINE L1 -2147 3999 2595 2284 103 0 0 chr5 169895058 169895350 -33190182 + AluY SINE Alu 1 292 -19 2462 132 50 5 chr5 169895352 169895710 -33189822 - L1PB1 LINE L1 -1 6150 5810 423 0 0 0 chr5 169895710 169895757 -33189775 + (TA)n Simple_repeat Simple_repeat 2 48 0 315 0 0 0 chr5 169895756 169895791 -33189741 + (CA)n Simple_repeat Simple_repeat 2 36 0 * 2462 132 50 5 chr5 169895757 169895855 -33189677 - L1PB1 LINE L1 -341 5810 5709 2761 136 18 21 chr5 169895958 169896196 -33189336 - L1PB1 LINE L1 -424 5727 5490 2142 99 13 13 chr5 169896196 169896499 -33189033 - AluSq SINE Alu -10 303 1 2761 136 18 21 chr5 169896499 169896848 -33188684 - L1PB1 LINE L1 -661 5490 5141 546 79 0 0 chr5 169896865 169896941 -33188591 + Tigger3b DNA MER2_type 335 410 -821 417 247 48 55 chr5 169896942 169897088 -33188444 + MIR SINE MIR 84 228 -34 2283 128 0 0 chr5 169897445 169897757 -33187775 + AluSx SINE Alu 1 312 0 276 286 59 13 chr5 169898095 169898210 -33187322 + MIR SINE MIR 24 143 -65 2271 190 120 19 chr5 169898611 169899035 -33186497 + L1MC4 LINE L1 6501 6881 -1161 3427 104 2 22 chr5 169899035 169899537 -33185995 - LTR22B LTR ERVK 0 492 1 2271 190 120 19 chr5 169899537 169900250 -33185282 + L1MC4 LINE L1 6881 7900 -142 219 163 0 23 chr5 169901016 169901059 -33184473 + A-rich Low_complexity Low_complexity 2 43 0 2003 186 116 19 chr5 169902398 169902812 -33182720 - MLT2B2 LTR ERVL -61 454 1 21 0 0 0 chr5 169903572 169903593 -33181939 + AT_rich Low_complexity Low_complexity 1 21 0 318 50 0 0 chr5 169903602 169903642 -33181890 + (CA)n Simple_repeat Simple_repeat 1 40 0 1230 100 0 12 chr5 169903902 169904072 -33181460 - AluSx SINE Alu -13 297 130 1407 228 128 33 chr5 169904143 169904603 -33180929 - MLT1D LTR MaLR 0 505 2 207 0 0 0 chr5 169904913 169904936 -33180596 + (CAA)n Simple_repeat Simple_repeat 2 24 0 898 145 0 0 chr5 169905043 169905167 -33180365 + FLAM_C SINE Alu 1 124 -19 287 322 127 39 chr5 169905686 169905891 -33179641 - MIR SINE MIR -10 252 30 355 265 121 0 chr5 169906506 169906638 -33178894 - MIR SINE MIR -1 261 114 604 279 27 16 chr5 169906681 169906864 -33178668 - MIR SINE MIR -53 209 25 262 257 10 40 chr5 169906945 169907046 -33178486 + L3 LINE CR1 1231 1328 -249 396 318 21 32 chr5 169907145 169907334 -33178198 - MER5A DNA MER1_type -2 187 1 276 293 13 13 chr5 169907840 169907915 -33177617 + MER5A DNA MER1_type 59 133 -56 1228 46 0 0 chr5 169907916 169908067 -33177465 + AluY SINE Alu 143 293 -18 297 178 0 0 chr5 169908067 169908112 -33177420 + MER5A DNA MER1_type 145 189 0 369 87 29 29 chr5 169908630 169908699 -33176833 - MADE1 DNA Mariner 0 80 12 650 152 0 0 chr5 169909271 169909370 -33176162 - AluSx SINE Alu -181 131 33 1886 109 53 0 chr5 169909656 169909946 -33175586 - AluSg SINE Alu 0 304 1 1703 185 33 28 chr5 169910496 169910704 -33174828 + MLT1A1 LTR MaLR 1 213 -152 2365 79 3 3 chr5 169910704 169911007 -33174525 + AluSp SINE Alu 1 303 -10 1703 185 33 28 chr5 169911007 169911161 -33174371 + MLT1A1 LTR MaLR 213 365 0 1017 113 0 0 chr5 169911304 169911437 -33174095 + AluSq/x SINE Alu 1 133 -180 258 32 0 0 chr5 169911437 169911468 -33174064 + (TA)n Simple_repeat Simple_repeat 1 31 0 316 315 76 68 chr5 169911503 169911912 -33173620 + L2 LINE L2 2068 2479 -835 492 259 35 50 chr5 169912854 169913055 -33172477 - MIR SINE MIR -42 220 23 408 191 18 64 chr5 169913472 169913582 -33171950 - MIR SINE MIR -12 250 146 213 293 203 24 chr5 169913610 169913733 -33171799 - MIR SINE MIR -111 151 7 594 209 30 0 chr5 169913922 169914056 -33171476 + MER119 DNA MER1_type 441 578 -5 4940 154 6 3 chr5 169914072 169915615 -33169917 - L1PB1 LINE L1 -142 6009 4462 231 208 0 0 chr5 169915609 169915662 -33169870 + L1 LINE L1 4446 4498 -1648 * 1627 199 46 73 chr5 169915663 169915915 -33169617 - MER119 DNA MER1_type -115 468 234 1702 177 7 31 chr5 169915915 169916209 -33169323 + AluJo SINE Alu 1 287 -25 1627 199 46 73 chr5 169916209 169916433 -33169099 - MER119 DNA MER1_type -349 234 5 249 276 129 0 chr5 169916672 169916788 -33168744 + L1MC/D LINE L1 5678 5808 -2000 225 132 0 0 chr5 169916792 169916830 -33168702 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2847 142 8 12 chr5 169916898 169917405 -33168127 + L1MA7 LINE L1 5552 6056 -235 24 0 0 0 chr5 169917415 169917439 -33168093 + AT_rich Low_complexity Low_complexity 1 24 0 319 341 49 0 chr5 169917934 169918057 -33167475 + MER5B DNA MER1_type 50 178 0 194 176 0 0 chr5 169918589 169918623 -33166909 - MIR SINE MIR -65 143 110 1895 131 4 0 chr5 169920094 169920369 -33165163 - AluJb SINE Alu 0 312 37 31 26 0 0 chr5 169920598 169920636 -33164896 + AT_rich Low_complexity Low_complexity 1 38 0 286 272 241 19 chr5 169921050 169921212 -33164320 - MIR SINE MIR -60 202 5 280 281 88 0 chr5 169921366 169921480 -33164052 + L1ME LINE L1 138 261 -5944 426 287 69 61 chr5 169921831 169922078 -33163454 + L1ME LINE L1 678 926 -5279 1758 179 10 7 chr5 169922179 169922476 -33163056 + AluJb SINE Alu 9 306 -6 673 269 42 40 chr5 169922476 169922875 -33162657 + L1ME LINE L1 988 1437 -4959 2321 132 0 0 chr5 169922875 169923186 -33162346 + AluSx SINE Alu 1 311 -1 673 269 42 40 chr5 169923186 169923344 -33162188 + L1ME LINE L1 1437 1593 -4803 2331 116 3 0 chr5 169923371 169923674 -33161858 + AluSx SINE Alu 1 304 -8 467 297 162 17 chr5 169923717 169924013 -33161519 + L1ME LINE L1 1928 2266 -4130 242 246 103 23 chr5 169924015 169924190 -33161342 + L1ME LINE L1 2267 2455 -3760 337 200 0 0 chr5 169924232 169924297 -33161235 + L1ME LINE L1 2567 2631 -3584 706 223 12 42 chr5 169924391 169924557 -33160975 + MIR SINE MIR 81 241 -21 1912 99 0 0 chr5 169924600 169924843 -33160689 + AluSc SINE Alu 60 302 -7 557 246 123 128 chr5 169925507 169925946 -33159586 + L2 LINE L2 2877 3313 0 248 195 35 126 chr5 169927086 169927173 -33158359 + MLT1D LTR MaLR 1 79 -426 239 294 0 0 chr5 169927481 169927553 -33157979 - MIR SINE MIR -105 103 32 1195 222 17 0 chr5 169927556 169927786 -33157746 + MIR SINE MIR 17 250 -12 242 237 237 59 chr5 169928487 169928622 -33156910 - MIR3 SINE MIR -47 161 3 390 287 47 16 chr5 169928938 169929067 -33156465 - L2 LINE L2 0 3313 3181 210 269 15 15 chr5 169929249 169929316 -33156216 - MIR SINE MIR -125 83 17 267 323 31 25 chr5 169930112 169930273 -33155259 + MIR3 SINE MIR 22 183 -25 199 296 128 8 chr5 169930323 169930448 -33155084 + MIR SINE MIR 46 185 -77 735 23 0 0 chr5 169931163 169931251 -33154281 - AluSg/x SINE Alu -6 306 219 2156 98 3 0 chr5 169931820 169932133 -33153399 + AluSx SINE Alu 1 314 0 3186 158 33 8 chr5 169932403 169932995 -33152537 + MER6A DNA MER2_type -1 605 0 306 280 200 36 chr5 169932996 169933221 -33152311 - L2 LINE L2 0 3313 3052 2089 124 0 7 chr5 169933533 169933831 -33151701 + AluSx SINE Alu 7 302 -10 264 30 0 0 chr5 169933834 169933867 -33151665 + (TA)n Simple_repeat Simple_repeat 1 33 0 1068 97 0 0 chr5 169933867 169934001 -33151531 - AluSq/x SINE Alu -179 134 1 324 275 57 57 chr5 169934946 169935037 -33150495 + MER31-int LTR ERV1 3836 3926 -1010 2022 151 132 0 chr5 169935037 169935415 -33150117 - MSTA LTR MaLR 0 428 1 324 275 57 57 chr5 169935415 169935534 -33149998 + MER31-int LTR ERV1 3925 4046 -890 25 0 0 0 chr5 169935570 169935595 -33149937 + AT_rich Low_complexity Low_complexity 1 25 0 809 177 0 102 chr5 169935601 169935936 -33149596 + L1MEc LINE L1 2134 2399 -3816 1390 109 0 14 chr5 169935942 169936152 -33149380 + Tigger3(Golem) DNA MER2_type 65 271 -2758 3579 233 47 23 chr5 169936156 169936206 -33149326 + L1MEc LINE L1 2384 2431 -3784 2036 159 0 0 chr5 169936206 169936507 -33149025 + AluSx SINE Alu 1 301 -11 3579 233 47 23 chr5 169936507 169937746 -33147786 + L1MEc LINE L1 2431 3704 -2511 1484 143 19 73 chr5 169937746 169938111 -33147421 - MER4A LTR ERV1 0 664 261 2240 110 0 19 chr5 169938117 169938427 -33147105 - AluSx SINE Alu -7 305 2 530 89 89 0 chr5 169938440 169938530 -33147002 - MER4A LTR ERV1 -566 98 1 860 202 81 0 chr5 169938530 169938753 -33146779 + L1MEc LINE L1 3716 3956 -2259 1713 184 32 11 chr5 169938790 169939165 -33146367 + L1MB8 LINE L1 5781 6163 -15 808 180 128 172 chr5 169939409 169939886 -33145646 + LTR37B LTR ERV1 6 461 -7 806 172 0 0 chr5 169939886 169940020 -33145512 - FLAM_C SINE Alu -4 139 6 399 290 60 38 chr5 169940175 169940358 -33145174 + MIR SINE MIR 49 235 -27 592 273 52 21 chr5 169940474 169940668 -33144864 - MIR3 SINE MIR -5 203 4 186 43 0 0 chr5 169940786 169940809 -33144723 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1505 163 10 36 chr5 169940892 169940931 -33144601 - MLT2D LTR ERVL 0 414 376 423 0 0 0 chr5 169940931 169940978 -33144554 + (TG)n Simple_repeat Simple_repeat 2 48 0 1505 163 10 36 chr5 169940978 169941245 -33144287 - MLT2D LTR ERVL -38 376 116 501 120 0 27 chr5 169941245 169941320 -33144212 - AluJ/FRAM SINE Alu -22 290 218 528 258 25 38 chr5 169941424 169941583 -33143949 + L3 LINE CR1 1309 1465 -112 439 327 7 13 chr5 169941690 169941840 -33143692 + MIR3 SINE MIR 45 193 -15 476 305 85 6 chr5 169942593 169942770 -33142762 - MIR SINE MIR -10 252 62 628 280 122 43 chr5 169943092 169943175 -33142357 + LTR33 LTR ERVL 25 100 -421 1423 259 88 32 chr5 169943175 169943639 -33141893 + LTR16C LTR ERVL 2 491 0 628 280 122 43 chr5 169943639 169944016 -33141516 + LTR33 LTR ERVL 100 521 0 1534 214 71 82 chr5 169944178 169944509 -33141023 - MLT1F LTR MaLR -24 518 194 324 0 0 0 chr5 169944509 169944545 -33140987 + (TG)n Simple_repeat Simple_repeat 2 37 0 1534 214 71 82 chr5 169944545 169944736 -33140796 - MLT1F LTR MaLR -348 194 2 315 254 42 0 chr5 169944933 169945004 -33140528 + MIR3 SINE MIR 84 157 -51 242 237 11 54 chr5 169945016 169945109 -33140423 - MIR SINE MIR -2 260 172 1120 270 139 10 chr5 169945546 169946100 -33139432 + L2 LINE L2 2501 3115 -198 335 214 43 0 chr5 169946198 169946268 -33139264 - L2 LINE L2 -1 3271 3199 463 165 22 0 chr5 169946364 169946455 -33139077 + MER31A LTR ERV1 1 93 -392 2429 87 0 3 chr5 169946457 169946767 -33138765 + AluY SINE Alu 1 309 -2 235 326 23 0 chr5 169947385 169947471 -33138061 - MIR SINE MIR -109 153 66 252 259 116 20 chr5 169947488 169947635 -33137897 + L1ME LINE L1 5482 5642 -479 255 258 30 83 chr5 169947694 169947826 -33137706 - LTR16C LTR ERVL -78 413 289 696 286 69 16 chr5 169948319 169948564 -33136968 + MIR SINE MIR 3 260 -2 2221 140 75 5 chr5 169948713 169949126 -33136406 + MER83 LTR ERV1 1 442 -6 331 238 125 95 chr5 169950738 169950906 -33134626 - MIR SINE MIR -60 202 30 2220 104 7 7 chr5 169952415 169952714 -33132818 + AluSc SINE Alu 1 299 -10 4673 152 52 65 chr5 169952793 169953778 -33131754 - L1MC3 LINE L1 -1 7784 6813 1813 162 21 3 chr5 169953778 169954068 -33131464 - AluJb SINE Alu -17 295 1 4673 152 52 65 chr5 169954068 169954196 -33131336 - L1MC3 LINE L1 -972 6813 6685 325 273 0 50 chr5 169954309 169954408 -33131124 - MIR SINE MIR -36 226 133 262 240 13 0 chr5 169954814 169954889 -33130643 + HAL1b LINE L1 1194 1269 -79 2403 54 7 3 chr5 169955589 169955883 -33129649 + AluY SINE Alu 1 295 -16 484 296 118 20 chr5 169955901 169956350 -33129182 + L1ME LINE L1 5209 5703 -418 21 0 0 0 chr5 169956573 169956594 -33128938 + AT_rich Low_complexity Low_complexity 1 21 0 597 287 97 23 chr5 169958143 169958495 -33127037 - L1ME LINE L1 -362 5800 5423 2200 224 48 2 chr5 169958513 169959075 -33126457 - L1ME1 LINE L1 -5 6161 5574 870 153 0 28 chr5 169959076 169959220 -33126312 - FLAM_C SINE Alu -3 140 1 1420 177 86 71 chr5 169959222 169959783 -33125749 - L1ME1 LINE L1 -584 5582 5004 41409 35 11 1 chr5 169959803 169965897 -33119635 - L1PA3 LINE L1 0 6155 4 1075 183 18 36 chr5 169966157 169966381 -33119151 + MIR SINE MIR 9 228 -34 1918 174 0 3 chr5 169966953 169967252 -33118280 + AluJo SINE Alu 1 298 -14 424 211 0 0 chr5 169967267 169967338 -33118194 + FRAM/FAM SINE Alu 7 77 -99 920 121 0 0 chr5 169967549 169967673 -33117859 - AluJ SINE Alu -9 303 180 16286 146 43 13 chr5 169967689 169969538 -33115994 - L1PB1 LINE L1 -12 6855 5062 1934 144 46 0 chr5 169969538 169969823 -33115709 - AluSx SINE Alu -14 298 1 16286 146 43 13 chr5 169969823 169974622 -33110910 - L1PB1 LINE L1 -1805 5062 3 1101 176 11 6 chr5 169974632 169974814 -33110718 - AluJ SINE Alu -125 187 5 27 29 0 0 chr5 169974851 169974885 -33110647 + AT_rich Low_complexity Low_complexity 1 34 0 590 218 90 26 chr5 169976041 169976197 -33109335 - MIR SINE MIR -3 259 94 2320 86 0 3 chr5 169976276 169976567 -33108965 + AluSx SINE Alu 1 290 -22 216 0 0 0 chr5 169977533 169977557 -33107975 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 488 277 78 0 chr5 169978204 169978345 -33107187 - MIR SINE MIR -10 252 101 369 174 54 0 chr5 169978453 169978545 -33106987 + L1MC5 LINE L1 7403 7499 -462 764 192 105 0 chr5 169978553 169978725 -33106807 + MER3 DNA MER1_type 2 191 -18 297 203 68 0 chr5 169978741 169978815 -33106717 + L1MC5 LINE L1 7498 7576 -385 230 250 18 0 chr5 169978817 169978873 -33106659 + GA-rich Low_complexity Low_complexity 4 60 0 573 216 29 61 chr5 169978892 169978941 -33106591 + L1MC5 LINE L1 7609 7658 -303 1100 166 0 6 chr5 169978941 169979116 -33106416 + FAM SINE Alu 1 174 -1 573 216 29 61 chr5 169979116 169979311 -33106221 + L1MC5 LINE L1 7658 7845 -116 239 103 77 0 chr5 169979341 169979380 -33106152 - LTR23 LTR ERV1 -76 361 320 260 186 35 35 chr5 169979384 169979470 -33106062 + L1MC5 LINE L1 7832 7917 -44 1450 142 10 73 chr5 169979543 169979845 -33105687 + AluJb SINE Alu 14 296 -16 1025 262 159 32 chr5 169979863 169980454 -33105078 + L1MC/D LINE L1 2110 2775 -3371 2816 16 0 0 chr5 169980921 169981230 -33104302 - AluY SINE Alu -2 309 1 28 48 0 0 chr5 169981273 169981315 -33104217 + AT_rich Low_complexity Low_complexity 1 42 0 868 114 8 0 chr5 169982694 169982817 -33102715 + AluSp/q SINE Alu 174 297 -16 243 200 33 0 chr5 169982979 169983039 -33102493 + L1MC/D LINE L1 2764 2825 -3321 492 246 80 68 chr5 169983046 169983310 -33102222 + L1MC/D LINE L1 2958 3224 -2922 32 26 0 0 chr5 169983319 169983358 -33102174 + AT_rich Low_complexity Low_complexity 1 39 0 276 284 128 0 chr5 169983377 169983486 -33102046 + L1MC/D LINE L1 5574 5696 -2112 2540 59 0 3 chr5 169983544 169983849 -33101683 - AluY SINE Alu -7 304 1 692 255 93 32 chr5 169983969 169984377 -33101155 + L1MC4a LINE L1 4823 5255 -891 304 237 32 11 chr5 169984416 169984538 -33100994 + L1MC4a LINE L1 5319 5442 -722 605 271 162 16 chr5 169984606 169984920 -33100612 + L1MC4a LINE L1 5575 5934 -1874 927 164 0 0 chr5 169985100 169985240 -33100292 + FRAM SINE Alu 11 150 -26 536 294 41 49 chr5 169985255 169985500 -33100032 + MIR SINE MIR 14 256 -6 1694 199 0 3 chr5 169986591 169986888 -33098644 + AluJo SINE Alu 1 296 -16 413 306 54 83 chr5 169987133 169987506 -33098026 + L1MC/D LINE L1 5459 5820 -1988 216 228 99 59 chr5 169987582 169987683 -33097849 + MIR SINE MIR 99 203 -59 1839 162 14 3 chr5 169987939 169988235 -33097297 + AluJb SINE Alu 1 299 -13 195 321 18 0 chr5 169988254 169988310 -33097222 + MER5A DNA MER1_type 84 140 -49 520 234 114 24 chr5 169988515 169988682 -33096850 - MIR SINE MIR -1 261 80 24 0 0 0 chr5 169988879 169988903 -33096629 + AT_rich Low_complexity Low_complexity 1 24 0 2059 149 0 3 chr5 169989597 169989906 -33095626 + AluJb SINE Alu 1 308 -4 244 332 126 50 chr5 169990513 169990751 -33094781 + L2 LINE L2 2466 2721 -593 2118 110 7 3 chr5 169991171 169991461 -33094071 + AluSx SINE Alu 3 293 -19 2100 108 0 3 chr5 169991787 169992075 -33093457 - AluSc SINE Alu -18 291 5 2178 118 0 7 chr5 169992513 169992819 -33092713 + AluSg SINE Alu 1 304 -6 485 192 131 0 chr5 169993248 169993378 -33092154 - L1ME4a LINE L1 0 6121 5975 260 192 162 10 chr5 169993394 169993493 -33092039 - L1ME4a LINE L1 -201 5920 5807 666 234 56 56 chr5 169993672 169993975 -33091557 - LTR50 LTR ERVL -42 753 451 713 219 98 69 chr5 169994010 169994042 -33091490 - LTR50 LTR ERVL -513 282 252 1578 180 24 10 chr5 169994042 169994331 -33091201 + AluJb SINE Alu 1 293 -19 713 219 98 69 chr5 169994331 169994572 -33090960 - LTR50 LTR ERVL -543 252 1 2080 112 14 3 chr5 169994588 169994882 -33090650 - AluSx SINE Alu -15 297 1 2346 115 0 0 chr5 169994973 169995285 -33090247 + AluSx SINE Alu 1 312 0 217 247 35 82 chr5 169995390 169995475 -33090057 - MER5A DNA MER1_type -63 126 46 922 208 0 0 chr5 169996125 169996284 -33089248 + FRAM SINE Alu 1 159 -17 2291 113 0 0 chr5 169996287 169996588 -33088944 + AluSx SINE Alu 1 301 -11 302 335 126 9 chr5 169996615 169996845 -33088687 + L1MC4a LINE L1 5648 5904 -1904 1664 163 0 46 chr5 169996904 169997210 -33088322 + AluSx SINE Alu 8 299 -13 1449 248 141 51 chr5 170000274 170000556 -33084976 + L2 LINE L2 1447 1702 -1612 737 205 0 0 chr5 170000556 170000673 -33084859 + FLAM_C SINE Alu 1 117 -16 1449 248 141 51 chr5 170000673 170000705 -33084827 + L2 LINE L2 1702 1730 -1584 2410 72 0 10 chr5 170000705 170001011 -33084521 + AluY SINE Alu 1 303 -8 1449 248 141 51 chr5 170001011 170001242 -33084290 + L2 LINE L2 1730 1939 -1375 4263 137 92 16 chr5 170001242 170001970 -33083562 + LTR39 LTR ERV1 1 783 0 1449 248 141 51 chr5 170001970 170002112 -33083420 + L2 LINE L2 1939 2198 -1116 1301 223 109 56 chr5 170002113 170002447 -33083085 + L1ME1 LINE L1 305 671 -5237 2273 122 3 0 chr5 170002447 170002758 -33082774 + AluSp SINE Alu 1 312 -1 1301 223 109 56 chr5 170002758 170002871 -33082661 + L1ME1 LINE L1 671 776 -5132 1252 131 0 0 chr5 170002887 170003062 -33082470 + AluSx SINE Alu 1 175 -137 4108 103 35 28 chr5 170003104 170003313 -33082219 + MER39B LTR ERV1 1 207 -446 2504 82 0 0 chr5 170003313 170003616 -33081916 + AluSg SINE Alu 1 303 -7 4108 103 35 28 chr5 170003616 170004054 -33081478 + MER39B LTR ERV1 207 653 0 1665 169 48 7 chr5 170004082 170004372 -33081160 + AluJo SINE Alu 1 302 -10 933 128 13 19 chr5 170004388 170004544 -33080988 + MER4A LTR ERV1 1 155 -509 908 291 14 7 chr5 170004609 170004884 -33080648 + PABL_B-int LTR ERV1 6407 6683 -439 1079 120 11 17 chr5 170005270 170005445 -33080087 - MER4A LTR ERV1 -490 174 1 328 118 44 44 chr5 170005450 170005518 -33080014 - MER4A-int LTR ERV1 -2 6596 6529 2163 120 16 0 chr5 170005755 170006064 -33079468 + LTR62 LTR ERVK 402 715 -4 340 219 45 10 chr5 170006066 170006194 -33079338 + L1ME1 LINE L1 1292 1585 -5022 2062 219 48 7 chr5 170006197 170006659 -33078873 + L1ME1 LINE L1 5864 6344 -102 428 214 96 79 chr5 170007052 170007208 -33078324 + MER53 DNA DNA 9 161 -28 219 114 0 0 chr5 170007208 170007243 -33078289 + (TG)n Simple_repeat Simple_repeat 1 35 0 300 27 0 0 chr5 170007245 170007282 -33078250 + (GA)n Simple_repeat Simple_repeat 2 38 0 428 214 96 79 chr5 170007282 170007300 -33078232 + MER53 DNA DNA 161 189 0 221 327 18 0 chr5 170008543 170008598 -33076934 - MIR SINE MIR -174 88 33 219 296 0 0 chr5 170008604 170008658 -33076874 - MIR SINE MIR -124 84 31 919 129 0 8 chr5 170009082 170009214 -33076318 - FLAM_C SINE Alu -12 131 1 220 250 0 0 chr5 170009951 170009999 -33075533 + MIR3 SINE MIR 154 201 -7 833 148 0 0 chr5 170010570 170010698 -33074834 - FRAM SINE Alu -10 166 39 444 181 0 0 chr5 170010731 170010803 -33074729 - FLAM_C SINE Alu -35 108 37 1959 154 13 16 chr5 170011260 170011572 -33073960 - AluJb SINE Alu -1 311 1 1818 138 47 7 chr5 170013396 170013671 -33071861 + AluJb SINE Alu 1 286 -26 505 204 0 0 chr5 170014039 170014127 -33071405 - MER58 DNA MER1_type 0 2420 128 192 339 9 80 chr5 170014882 170014994 -33070538 - L2 LINE L2 -32 3240 3137 234 329 38 0 chr5 170015128 170015207 -33070325 - MIR SINE MIR -14 248 167 195 349 0 0 chr5 170016127 170016190 -33069342 + MER5C DNA MER1_type 14 76 -248 295 281 12 0 chr5 170018142 170018224 -33067308 + MIR SINE MIR 153 235 -27 762 174 0 0 chr5 170018260 170018375 -33067157 + FLAM_A SINE Alu 13 127 -15 2299 98 3 0 chr5 170018449 170018744 -33066788 - AluSg SINE Alu -14 296 1 401 250 293 7 chr5 170019426 170019566 -33065966 + MLT1J2 LTR MaLR 263 442 -8 723 199 8 8 chr5 170019642 170019773 -33065759 - FLAM_C SINE Alu 0 133 3 391 267 35 0 chr5 170019792 170019878 -33065654 + MIR SINE MIR 26 114 -148 251 299 70 99 chr5 170019961 170020275 -33065257 - L2 LINE L2 -706 2608 2304 2347 103 0 13 chr5 170020478 170020789 -33064743 - AluSg SINE Alu -3 307 1 393 248 35 93 chr5 170020866 170021013 -33064519 - L1MC4 LINE L1 -1 8041 7910 1872 136 0 73 chr5 170021013 170021329 -33064203 - AluSx SINE Alu -19 293 1 393 248 35 93 chr5 170021329 170021407 -33064125 - L1MC4 LINE L1 -132 7910 7829 1008 131 186 5 chr5 170021410 170021686 -33063846 - MER47A DNA MER2_type 0 366 4 3051 203 80 48 chr5 170021758 170022267 -33063265 - L1ME2 LINE L1 -10 6137 5593 2297 95 0 0 chr5 170022267 170022563 -33062969 + AluSx SINE Alu 1 296 -16 3051 203 80 48 chr5 170022563 170022831 -33062701 - L1ME2 LINE L1 -554 5593 5335 1115 171 0 0 chr5 170022866 170023030 -33062502 - FRAM SINE Alu -2 164 1 712 217 33 71 chr5 170023031 170023204 -33062328 - L1ME2 LINE L1 -780 5349 5186 2339 110 3 0 chr5 170023204 170023514 -33062018 - AluSx SINE Alu -1 311 1 712 217 33 71 chr5 170023514 170023580 -33061952 - L1ME2 LINE L1 -943 5186 5119 1929 138 56 6 chr5 170023599 170023919 -33061613 - MLT1C LTR MaLR 0 467 132 2835 240 93 25 chr5 170023953 170025054 -33060478 - L1ME2 LINE L1 -1468 4661 3487 1928 243 82 19 chr5 170025078 170025199 -33060333 - L1MD3 LINE L1 0 8042 7930 2773 32 0 0 chr5 170025199 170025510 -33060022 - AluY SINE Alu 0 311 1 2197 124 0 16 chr5 170025512 170025826 -33059706 - AluSg SINE Alu 0 310 2 1928 243 82 19 chr5 170025826 170025967 -33059565 - L1MD3 LINE L1 -112 7930 7799 1906 140 3 17 chr5 170025967 170026267 -33059265 + AluJb SINE Alu 14 309 -3 1928 243 82 19 chr5 170026267 170026673 -33058859 - L1MD3 LINE L1 -243 7799 7329 344 294 20 10 chr5 170026673 170026775 -33058757 - MLT1F1 LTR MaLR -420 147 45 398 164 50 100 chr5 170026781 170026921 -33058611 - L1MC3 LINE L1 -684 7101 6969 302 235 37 12 chr5 170026921 170027002 -33058530 - L1 LINE L1 -927 5219 5137 330 224 12 0 chr5 170027182 170027267 -33058265 - L1 LINE L1 -3757 2389 2304 873 158 122 0 chr5 170027284 170027448 -33058084 - AluJo SINE Alu -6 306 123 2459 73 3 0 chr5 170027527 170027828 -33057704 - AluY SINE Alu -9 302 1 519 191 129 20 chr5 170028205 170028352 -33057180 - L1ME2 LINE L1 -5002 1117 955 637 258 156 26 chr5 170028374 170028676 -33056856 - L1ME3A LINE L1 -9 6161 5821 2315 113 3 0 chr5 170028806 170029115 -33056417 - AluSx SINE Alu -2 310 1 23 0 0 0 chr5 170029453 170029476 -33056056 + AT_rich Low_complexity Low_complexity 1 23 0 595 290 24 0 chr5 170030081 170030250 -33055282 - MIR SINE MIR -82 180 8 435 220 76 8 chr5 170030350 170030468 -33055064 + MIR SINE MIR 82 207 -55 192 77 0 0 chr5 170030513 170030539 -33054993 + (CAT)n Simple_repeat Simple_repeat 1 26 0 243 344 120 45 chr5 170030742 170031166 -33054366 + L2 LINE L2 2817 3272 0 * 277 244 135 20 chr5 170031161 170031261 -33054271 + L3 LINE CR1 1342 1452 -125 2087 117 3 0 chr5 170031366 170031664 -33053868 - AluSx SINE Alu -13 299 1 258 349 63 8 chr5 170031672 170031798 -33053734 + MER5A DNA MER1_type 57 189 0 2420 76 0 0 chr5 170032248 170032549 -33052983 - AluSg SINE Alu -8 302 2 506 336 74 35 chr5 170032769 170033142 -33052390 + L1ME3 LINE L1 5414 5810 -352 2007 129 0 22 chr5 170033142 170033453 -33052079 + AluSq SINE Alu 1 304 -9 506 336 74 35 chr5 170033453 170033537 -33051995 + L1ME3 LINE L1 5810 5889 -273 2031 132 10 7 chr5 170033774 170034084 -33051448 - AluSx SINE Alu -1 311 1 403 199 43 64 chr5 170034691 170034832 -33050700 - L3 LINE CR1 -282 1295 1158 2132 110 0 3 chr5 170035177 170035487 -33050045 + AluSg SINE Alu 2 310 0 557 283 82 11 chr5 170035525 170035709 -33049823 - MIR SINE MIR -55 207 11 424 306 13 32 chr5 170035915 170036072 -33049460 + MIR SINE MIR 10 163 -99 187 295 51 26 chr5 170036116 170036194 -33049338 - L2 LINE L2 -5 3308 3229 * 207 318 0 0 chr5 170036179 170036245 -33049287 + MIR SINE MIR 191 256 -6 538 254 31 79 chr5 170037346 170037587 -33047945 + MIR SINE MIR 30 262 0 189 0 0 0 chr5 170037906 170037927 -33047605 + (T)n Simple_repeat Simple_repeat 1 21 0 187 343 0 0 chr5 170038092 170038162 -33047370 + MIR SINE MIR 74 143 -65 452 319 39 5 chr5 170038412 170038616 -33046916 - L1MC/D LINE L1 -2277 5531 5321 852 160 142 36 chr5 170038620 170038845 -33046687 - L2 LINE L2 -745 2569 2321 2172 118 0 3 chr5 170038867 170039180 -33046352 + AluSx SINE Alu 1 312 0 382 210 81 16 chr5 170039182 170039306 -33046226 - L1ME4a LINE L1 -23 6098 5967 1993 73 49 28 chr5 170039441 170039728 -33045804 - AluSg SINE Alu -17 293 1 333 303 83 0 chr5 170039846 170039978 -33045554 - L2 LINE L2 -965 2349 2207 1215 268 45 3 chr5 170040373 170040727 -33044805 - L2 LINE L2 -1114 2200 1832 512 284 67 22 chr5 170040727 170041127 -33044405 + L1MC4 LINE L1 7354 7886 -156 1619 267 88 26 chr5 170041197 170041773 -33043759 - L2 LINE L2 -1480 1834 1223 1930 149 7 0 chr5 170041890 170042192 -33043340 + AluSx SINE Alu 1 304 -8 246 115 49 0 chr5 170042256 170042317 -33043215 + (TA)n Simple_repeat Simple_repeat 1 64 0 2195 104 0 3 chr5 170042317 170042616 -33042916 - AluSx SINE Alu -14 298 1 2253 88 7 0 chr5 170042889 170043194 -33042338 - AluSp SINE Alu -6 307 1 832 181 0 0 chr5 170043222 170043360 -33042172 + FLAM_C SINE Alu 4 141 -2 291 298 0 25 chr5 170043364 170043485 -33042047 + L1ME4a LINE L1 5617 5734 -387 763 217 115 0 chr5 170043585 170043802 -33041730 + LTR16A1 LTR ERVL 216 457 0 456 335 73 23 chr5 170043898 170044116 -33041416 + L1ME4a LINE L1 5861 6089 -32 518 264 109 45 chr5 170044179 170044399 -33041133 + MIR SINE MIR 14 247 -15 278 375 17 8 chr5 170044786 170044906 -33040626 + MER5A DNA MER1_type 64 184 -5 2065 139 7 0 chr5 170044925 170045235 -33040297 - AluJo SINE Alu 0 312 1 223 215 31 15 chr5 170045443 170045508 -33040024 + (CACTC)n Simple_repeat Simple_repeat 5 70 0 199 250 240 0 chr5 170046120 170046220 -33039312 - MIR3 SINE MIR -1 207 84 330 315 0 0 chr5 170046935 170047027 -33038505 + MIR3 SINE MIR 69 160 -48 292 263 92 0 chr5 170047911 170047987 -33037545 + L2 LINE L2 3231 3313 0 202 188 0 0 chr5 170047987 170048019 -33037513 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 329 213 0 11 chr5 170048050 170048144 -33037388 + CT-rich Low_complexity Low_complexity 4 96 0 388 297 148 34 chr5 170048187 170048423 -33037109 - L2 LINE L2 -76 3196 2934 336 317 235 2 chr5 170048536 170048962 -33036570 - L2 LINE L2 -556 2758 2234 437 276 15 26 chr5 170049448 170049598 -33035934 - MIR3 SINE MIR -37 171 26 295 304 138 29 chr5 170050756 170050894 -33034638 - L3 LINE CR1 -2 1575 1423 333 0 0 0 chr5 170051476 170051513 -33034019 + (TG)n Simple_repeat Simple_repeat 1 37 0 258 32 0 0 chr5 170051512 170051543 -33033989 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 377 264 18 74 chr5 170051595 170051758 -33033774 - MIR3 SINE MIR -44 164 11 318 26 0 0 chr5 170052167 170052206 -33033326 + (CGGGGG)n Simple_repeat Simple_repeat 6 44 0 790 149 51 77 chr5 170052781 170052976 -33032556 + MIR SINE MIR 72 261 -1 2085 89 7 10 chr5 170052992 170053285 -33032247 + AluSx SINE Alu 1 292 -20 317 220 42 93 chr5 170053677 170053795 -33031737 + L1MC4a LINE L1 6063 6174 -1634 2342 71 3 0 chr5 170053805 170054099 -33031433 - AluSp SINE Alu -18 295 1 341 286 7 54 chr5 170054384 170054531 -33031001 - MIR SINE MIR -24 238 99 297 0 0 0 chr5 170054559 170054592 -33030940 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 333 23 58 chr5 170055050 170055137 -33030395 - MIR3 SINE MIR -11 197 114 212 367 0 0 chr5 170055442 170055521 -33030011 + L3 LINE CR1 1193 1271 -306 528 324 27 0 chr5 170055927 170056112 -33029420 - MIR3 SINE MIR -9 199 10 225 366 12 0 chr5 170057099 170057181 -33028351 - MIR3 SINE MIR -15 193 111 216 0 0 0 chr5 170057334 170057358 -33028174 + (CAGCC)n Simple_repeat Simple_repeat 5 28 0 423 252 18 0 chr5 170057561 170057672 -33027860 - MIR SINE MIR -61 147 35 326 301 68 31 chr5 170058382 170058545 -33026987 - MIR3 SINE MIR -38 170 2 1010 268 127 36 chr5 170061331 170061683 -33023849 + L2 LINE L2 2833 3234 -79 2411 63 0 3 chr5 170061683 170061984 -33023548 - AluSq SINE Alu -13 300 1 1010 268 127 36 chr5 170061984 170062072 -33023460 + L2 LINE L2 3234 3313 0 1780 157 0 17 chr5 170062190 170062490 -33023042 - AluJb SINE Alu 0 312 18 1775 162 3 29 chr5 170062582 170062896 -33022636 - AluJo SINE Alu -6 306 1 421 339 23 11 chr5 170063095 170063272 -33022260 - MIR SINE MIR -62 200 22 246 180 148 0 chr5 170063431 170063492 -33022040 + L2 LINE L2 3244 3313 0 289 270 11 22 chr5 170063740 170063829 -33021703 - MIR3 SINE MIR -11 197 110 458 225 27 0 chr5 170064223 170064334 -33021198 + MIR SINE MIR 31 144 -118 546 279 133 40 chr5 170064559 170064755 -33020777 - L3 LINE CR1 -1 1576 1400 2035 128 20 3 chr5 170064755 170065052 -33020480 - AluJb SINE Alu -10 302 1 546 279 133 40 chr5 170065052 170065112 -33020420 - L3 LINE CR1 -177 1400 1347 2209 98 0 0 chr5 170065112 170065409 -33020123 + AluSg SINE Alu 1 297 -13 546 279 133 40 chr5 170065409 170065527 -33020005 - L3 LINE CR1 -230 1347 1166 550 290 70 0 chr5 170065532 170065718 -33019814 - MIR SINE MIR 0 262 64 696 302 67 4 chr5 170066767 170066992 -33018540 - MIR SINE MIR -16 246 8 323 360 21 9 chr5 170068291 170068524 -33017008 + L2 LINE L2 2610 2845 -469 552 240 45 3 chr5 170068833 170068993 -33016539 - MIR SINE MIR -62 146 32 582 249 77 11 chr5 170069193 170069374 -33016158 - MIR SINE MIR -1 261 69 238 259 0 0 chr5 170070710 170070764 -33014768 - L2 LINE L2 -217 3055 3002 574 242 49 54 chr5 170071489 170071712 -33013820 - MIR SINE MIR -15 247 26 429 307 45 23 chr5 170071819 170071995 -33013537 + MIR SINE MIR 80 259 -3 343 326 29 7 chr5 170072392 170072530 -33013002 + MIR3 SINE MIR 19 159 -49 234 279 0 0 chr5 170072533 170072594 -33012938 - MER113 DNA MER1_type? -2 519 459 1015 247 125 24 chr5 170072757 170073134 -33012398 - L2 LINE L2 0 3313 2899 1973 134 20 0 chr5 170073178 170073477 -33012055 + AluSx SINE Alu 1 305 -7 428 0 19 0 chr5 170074061 170074113 -33011419 + (TG)n Simple_repeat Simple_repeat 2 54 0 1636 158 10 34 chr5 170074113 170074404 -33011128 - AluJb SINE Alu -28 284 1 332 283 0 44 chr5 170074556 170074669 -33010863 + MIR3 SINE MIR 13 120 -88 264 324 166 14 chr5 170074683 170074822 -33010710 + MER5A DNA MER1_type 30 189 0 32 26 0 0 chr5 170074919 170074958 -33010574 + AT_rich Low_complexity Low_complexity 1 39 0 823 191 0 0 chr5 170074959 170075100 -33010432 - FLAM_C SINE Alu -1 142 2 331 219 14 0 chr5 170075206 170075279 -33010253 - MIR SINE MIR -109 153 80 196 263 40 40 chr5 170075581 170075657 -33009875 + MIR SINE MIR 56 131 -77 327 274 145 0 chr5 170075743 170075860 -33009672 + L2 LINE L2 3178 3311 -2 499 272 158 19 chr5 170076595 170076753 -33008779 - MER5A DNA MER1_type -1 188 9 316 296 98 0 chr5 170076772 170076887 -33008645 - MIR SINE MIR -70 138 23 293 281 155 52 chr5 170077412 170077794 -33007738 + L2 LINE L2 2853 3271 -1 229 211 19 0 chr5 170078058 170078110 -33007422 - MIR SINE MIR -85 123 71 237 191 31 15 chr5 170078593 170078670 -33006862 + MIR SINE MIR 81 159 -49 727 206 155 23 chr5 170079000 170079219 -33006313 + MIR SINE MIR 1 248 -14 340 306 41 20 chr5 170079452 170079599 -33005933 - MIR3 SINE MIR -43 165 16 1584 154 75 10 chr5 170079639 170079931 -33005601 + AluJo SINE Alu 1 311 -1 2054 110 10 0 chr5 170080017 170080309 -33005223 - AluSx SINE Alu -17 295 1 525 297 97 0 chr5 170080361 170080546 -33004986 - MIR SINE MIR -46 216 14 471 60 0 0 chr5 170080869 170080936 -33004596 + (CA)n Simple_repeat Simple_repeat 1 67 0 597 258 66 37 chr5 170081222 170081466 -33004066 + L2 LINE L2 3008 3258 -55 325 204 0 97 chr5 170081495 170081598 -33003934 - MIR SINE MIR -79 129 37 187 310 28 0 chr5 170082141 170082212 -33003320 + MIR3 SINE MIR 89 161 -47 230 309 52 0 chr5 170082521 170082618 -33002914 - MIR3 SINE MIR -41 167 66 193 184 41 20 chr5 170082986 170083035 -33002497 - MIR SINE MIR -86 122 73 340 221 144 0 chr5 170083834 170083938 -33001594 - MIR3 SINE MIR -54 154 36 234 237 0 53 chr5 170084062 170084193 -33001339 + C-rich Low_complexity Low_complexity 5 128 0 203 174 0 22 chr5 170084214 170084260 -33001272 + (CGGG)n Simple_repeat Simple_repeat 1 45 0 243 229 30 38 chr5 170084528 170084659 -33000873 + C-rich Low_complexity Low_complexity 5 134 0 203 174 0 22 chr5 170084680 170084726 -33000806 + (CGGG)n Simple_repeat Simple_repeat 1 45 0 202 114 29 0 chr5 170084758 170084793 -33000739 + (CCCCG)n Simple_repeat Simple_repeat 5 40 0 235 325 31 61 chr5 170085366 170085529 -33000003 + MER5B DNA MER1_type 21 178 0 827 248 65 5 chr5 170087076 170087273 -32998259 + MIR SINE MIR 2 211 -51 550 244 59 0 chr5 170087273 170087408 -32998124 + MIR3 SINE MIR 2 144 -64 568 74 42 0 chr5 170088134 170088148 -32997384 + GA-rich Low_complexity Low_complexity 2 14 -86 2348 97 0 0 chr5 170088148 170088459 -32997073 + AluSx SINE Alu 1 311 -1 568 74 42 0 chr5 170088459 170088539 -32996993 + GA-rich Low_complexity Low_complexity 14 100 0 521 154 48 10 chr5 170088573 170088677 -32996855 + MIR SINE MIR 57 164 -98 637 346 17 4 chr5 170088844 170089084 -32996448 + MIR SINE MIR 12 254 -8 256 298 41 41 chr5 170089190 170089361 -32996171 - MIR SINE MIR -64 144 24 354 288 48 8 chr5 170090023 170090148 -32995384 + MIR SINE MIR 20 149 -59 184 296 56 0 chr5 170090219 170090290 -32995242 + L2 LINE L2 3200 3274 -39 242 263 105 0 chr5 170091485 170091580 -32993952 + MER113 DNA MER1_type? 2 106 -415 2155 91 10 3 chr5 170091853 170092150 -32993382 + AluSq SINE Alu 3 301 -12 539 295 88 23 chr5 170092174 170092391 -32993141 + MIR SINE MIR 32 262 0 201 360 0 0 chr5 170092386 170092461 -32993071 - L2 LINE L2 -1 3271 3197 * 342 317 158 28 chr5 170092549 170092972 -32992560 - L2 LINE L2 -682 2632 2155 279 352 37 0 chr5 170093001 170093109 -32992423 + MIR SINE MIR 37 148 -60 676 164 17 35 chr5 170093505 170093663 -32991869 - MIR SINE MIR -63 145 27 216 353 33 16 chr5 170093816 170093938 -32991594 + MIR3 SINE MIR 85 208 0 418 264 74 0 chr5 170094425 170094546 -32990986 - MIR SINE MIR -120 142 13 268 314 81 8 chr5 170094810 170094934 -32990598 - MIR3 SINE MIR -62 146 14 353 329 104 0 chr5 170095151 170095315 -32990217 + MIR SINE MIR 20 200 -62 180 353 15 0 chr5 170095584 170095652 -32989880 + MIR SINE MIR 36 104 -104 1978 142 6 3 chr5 170096351 170096662 -32988870 + AluJb SINE Alu 1 312 0 908 256 74 4 chr5 170096682 170096924 -32988608 - MIR SINE MIR -1 261 3 220 269 0 15 chr5 170096952 170097019 -32988513 + GA-rich Low_complexity Low_complexity 2 67 0 196 353 0 0 chr5 170097024 170097092 -32988440 + L2 LINE L2 3246 3313 0 241 349 6 11 chr5 170097428 170097536 -32987996 + MIR SINE MIR 31 141 -67 189 373 68 25 chr5 170097952 170098070 -32987462 + MIR SINE MIR 24 146 -62 682 253 75 0 chr5 170098090 170098276 -32987256 - L2 LINE L2 0 3313 3114 197 224 103 0 chr5 170098712 170098770 -32986762 + MIR SINE MIR 141 204 -58 559 280 60 20 chr5 170098837 170099037 -32986495 - MIR SINE MIR -1 261 54 216 328 84 0 chr5 170099110 170099241 -32986291 + MIR3 SINE MIR 44 185 -23 226 317 81 0 chr5 170099503 170099626 -32985906 - MIR3 SINE MIR -52 156 24 2274 92 0 13 chr5 170099834 170100151 -32985381 + AluSq SINE Alu 1 313 0 966 218 66 0 chr5 170100204 170100401 -32985131 - MER63A DNA MER1_type 0 210 1 323 354 15 8 chr5 170100419 170100549 -32984983 + MIR SINE MIR 56 186 -76 229 305 32 59 chr5 170100583 170100770 -32984762 - MER5A DNA MER1_type -6 183 2 1510 153 36 66 chr5 170101389 170101723 -32983809 + MER33 DNA MER1_type 1 324 0 563 150 10 36 chr5 170101730 170101872 -32983660 + MIR SINE MIR 38 165 -67 240 329 0 0 chr5 170101967 170102040 -32983492 + L3 LINE CR1 1417 1489 -88 690 291 71 28 chr5 170102041 170102323 -32983209 - L3 LINE CR1 -493 1084 791 196 306 0 0 chr5 170102712 170102774 -32982758 + MIR SINE MIR 63 124 -84 532 268 153 4 chr5 170102875 170103103 -32982429 + MIR SINE MIR 1 262 0 197 219 14 0 chr5 170103221 170103294 -32982238 + (TG)n Simple_repeat Simple_repeat 1 74 0 518 251 0 9 chr5 170103342 170103684 -32981848 + (TG)n Simple_repeat Simple_repeat 1 338 0 225 213 0 21 chr5 170104800 170104847 -32980685 - L2 LINE L2 -1 3312 3267 * 677 262 112 0 chr5 170104820 170105026 -32980506 - MIR SINE MIR -14 248 20 184 231 204 9 chr5 170106098 170106206 -32979326 - MIR3 SINE MIR -77 131 3 425 19 19 0 chr5 170106870 170106924 -32978608 + (CA)n Simple_repeat Simple_repeat 1 55 0 824 169 0 0 chr5 170107088 170107218 -32978314 + FLAM_C SINE Alu 8 137 -6 498 163 0 0 chr5 170107227 170107313 -32978219 + AluJ/FRAM SINE Alu 227 312 0 357 302 30 47 chr5 170107538 170107707 -32977825 - MIR3 SINE MIR -11 197 32 309 266 73 9 chr5 170109336 170109445 -32976087 - MIR3 SINE MIR -16 192 77 288 253 35 23 chr5 170109797 170109884 -32975648 - MIR SINE MIR -81 127 40 206 216 0 39 chr5 170110065 170110116 -32975416 + MIR SINE MIR 202 250 -12 208 295 67 57 chr5 170110135 170110240 -32975292 - L2 LINE L2 -17 3255 3150 395 268 87 7 chr5 170110288 170110426 -32975106 - MIR SINE MIR -90 172 24 329 250 37 46 chr5 170111336 170111444 -32974088 - MIR SINE MIR 0 262 156 884 223 0 77 chr5 170111829 170111987 -32973545 - 7SLRNA srpRNA srpRNA -53 267 98 2106 117 3 0 chr5 170111987 170112286 -32973246 + AluSx SINE Alu 3 302 -10 2153 91 0 7 chr5 170112289 170112612 -32972920 + AluSp SINE Alu 1 321 0 884 223 0 77 chr5 170112612 170112668 -32972864 - 7SLRNA srpRNA srpRNA -224 96 65 250 264 64 79 chr5 170113521 170113661 -32971871 - MIR3 SINE MIR -48 160 23 367 288 39 39 chr5 170114448 170114601 -32970931 + MIR3 SINE MIR 38 190 -18 366 233 44 63 chr5 170115070 170115229 -32970303 + MIR SINE MIR 56 211 -51 501 265 8 15 chr5 170115276 170115408 -32970124 - MIR3 SINE MIR -17 191 61 1697 176 7 0 chr5 170116164 170116460 -32969072 + AluJb SINE Alu 3 300 -12 234 376 0 17 chr5 170116460 170116577 -32968955 - MIR3 SINE MIR -51 157 43 518 302 175 4 chr5 170116852 170117120 -32968412 + L3 LINE CR1 1259 1572 -5 817 130 51 28 chr5 170117548 170117725 -32967807 + MER53 DNA DNA 1 181 -8 2259 93 3 0 chr5 170117727 170118027 -32967505 - AluSp SINE Alu 0 313 13 1307 212 90 20 chr5 170118057 170118401 -32967131 - MER113 DNA MER1_type? -145 376 9 548 332 20 5 chr5 170119115 170119311 -32966221 - MIR SINE MIR -1 261 63 181 232 58 14 chr5 170119483 170119552 -32965980 + MIR SINE MIR 65 136 -72 515 356 61 19 chr5 170120262 170120558 -32964974 + L1MC4a LINE L1 5558 5873 -1935 2173 110 0 7 chr5 170120558 170120858 -32964674 + AluSx SINE Alu 1 298 -14 515 356 61 19 chr5 170120858 170120923 -32964609 + L1MC4a LINE L1 5873 5934 -1874 196 307 168 0 chr5 170122017 170122118 -32963414 - MIR SINE MIR -55 153 36 287 286 101 8 chr5 170122168 170122287 -32963245 + MIR3 SINE MIR 74 203 -5 433 237 12 0 chr5 170122386 170122555 -32962977 + (TCCA)n Simple_repeat Simple_repeat 4 174 0 206 261 29 0 chr5 170122568 170122637 -32962895 + (CATA)n Simple_repeat Simple_repeat 1 71 0 483 173 0 0 chr5 170122651 170122761 -32962771 + (TCCA)n Simple_repeat Simple_repeat 4 113 0 315 336 56 0 chr5 170122768 170122875 -32962657 - L1MC4 LINE L1 -1342 6700 6588 306 266 0 0 chr5 170122912 170123089 -32962443 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 244 285 101 57 chr5 170123125 170123283 -32962249 - L2 LINE L2 0 3313 3149 507 160 0 0 chr5 170123308 170123402 -32962130 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 201 333 0 0 chr5 170123486 170123564 -32961968 - L2 LINE L2 -219 3053 2976 385 273 7 91 chr5 170124409 170124552 -32960980 + MIR SINE MIR 103 233 -29 214 254 16 32 chr5 170125341 170125404 -32960128 + MIR SINE MIR 201 262 0 450 0 0 0 chr5 170125485 170125535 -32959997 + (TG)n Simple_repeat Simple_repeat 2 51 0 364 319 35 0 chr5 170126323 170126464 -32959068 + L1ME4a LINE L1 5612 5757 -364 271 330 40 31 chr5 170126514 170126741 -32958791 + L1ME4a LINE L1 5837 6065 -56 539 165 0 0 chr5 170126775 170126860 -32958672 + AluJ/FLAM SINE Alu 2 86 -226 381 242 23 47 chr5 170127840 170127968 -32957564 - MIR SINE MIR -92 170 46 2927 201 65 26 chr5 170127980 170128674 -32956858 - L1M4 LINE L1 -1235 4911 4179 1655 168 0 49 chr5 170128674 170129002 -32956530 - AluJo SINE Alu 0 312 1 2927 201 65 26 chr5 170129002 170129119 -32956413 - L1M4 LINE L1 -1967 4179 4068 6913 174 120 26 chr5 170129540 170130947 -32954585 - MER52A LTR ERV1 -216 1539 1 2201 88 3 0 chr5 170131196 170131490 -32954042 - AluY SINE Alu -16 295 1 530 183 0 52 chr5 170131631 170131746 -32953786 - MLT2C2 LTR ERVL 0 464 356 934 256 58 72 chr5 170131753 170132182 -32953350 + MLT2B1 LTR ERVL 1 423 -41 447 278 0 0 chr5 170132203 170132379 -32953153 + (CA)n Simple_repeat Simple_repeat 2 177 0 273 122 0 0 chr5 170132419 170132460 -32953072 + MLT2C1 LTR ERVL 350 390 -7 875 249 59 17 chr5 170132484 170132721 -32952811 - MLT2C1 LTR ERVL -123 274 28 245 230 138 0 chr5 170132821 170132908 -32952624 - MIR3 SINE MIR -105 103 5 295 267 0 0 chr5 170133643 170133729 -32951803 + CT-rich Low_complexity Low_complexity 4 89 0 483 319 14 0 chr5 170133944 170134088 -32951444 - MIR SINE MIR -115 147 2 192 77 0 0 chr5 170134167 170134193 -32951339 + (CG)n Simple_repeat Simple_repeat 2 27 0 * 243 0 0 0 chr5 170134192 170134219 -32951313 + (CA)n Simple_repeat Simple_repeat 1 27 0 199 311 134 10 chr5 170134728 170134937 -32950595 + MIR SINE MIR 8 242 -20 488 267 167 6 chr5 170135210 170135390 -32950142 - MIR SINE MIR 0 262 54 409 298 140 13 chr5 170136462 170136697 -32948835 + L1ME4a LINE L1 5641 5905 -216 221 317 55 28 chr5 170136756 170136901 -32948631 + MIR SINE MIR 14 162 -100 2770 23 0 0 chr5 170136902 170137201 -32948331 + AluY SINE Alu 1 299 -12 344 176 39 88 chr5 170137315 170137351 -32948181 + L1ME4a LINE L1 6025 6061 -60 2493 59 10 0 chr5 170137351 170137654 -32947878 - AluY SINE Alu -4 307 2 344 176 39 88 chr5 170137654 170137719 -32947813 + L1ME4a LINE L1 6061 6121 0 263 262 138 40 chr5 170138150 170138221 -32947311 + L1ME4a LINE L1 5820 5883 -238 1939 146 0 59 chr5 170138221 170138335 -32947197 + AluSx SINE Alu 1 120 -192 2287 125 0 3 chr5 170138335 170138646 -32946886 - AluSg SINE Alu 0 310 1 1939 146 0 59 chr5 170138646 170138854 -32946678 + AluSx SINE Alu 120 304 -8 263 262 138 40 chr5 170138854 170139057 -32946475 + L1ME4a LINE L1 5883 6121 0 180 200 29 0 chr5 170139644 170139679 -32945853 + MIR SINE MIR 114 149 -59 357 344 37 25 chr5 170140205 170140368 -32945164 - MER5A DNA MER1_type 0 189 25 946 157 5 0 chr5 170141214 170141399 -32944133 + L1MB7 LINE L1 5307 5492 -686 721 209 0 0 chr5 170141413 170141547 -32943985 + FRAM SINE Alu 13 146 -30 240 35 0 0 chr5 170141550 170141579 -32943953 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2019 168 0 0 chr5 170141579 170141889 -32943643 + AluJb SINE Alu 1 310 -2 2866 158 80 6 chr5 170141889 170142516 -32943016 + L1MB7 LINE L1 5493 6165 -19 3230 189 56 40 chr5 170142554 170143162 -32942370 - L1MB4 LINE L1 -1 6179 5582 279 0 0 0 chr5 170143162 170143193 -32942339 + (TA)n Simple_repeat Simple_repeat 2 32 0 1988 128 57 7 chr5 170143196 170143492 -32942040 + AluSx SINE Alu 1 311 -1 3230 189 56 40 chr5 170143492 170143779 -32941753 - L1MB4 LINE L1 -599 5581 5300 1989 163 7 0 chr5 170143779 170144080 -32941452 - AluJb SINE Alu -9 303 1 3230 189 56 40 chr5 170144080 170144503 -32941029 - L1MB4 LINE L1 -880 5300 4885 2219 113 0 0 chr5 170144503 170144819 -32940713 - AluSx SINE Alu 0 316 1 3230 189 56 40 chr5 170144819 170145145 -32940387 - L1MB4 LINE L1 -1295 4885 4410 306 0 0 0 chr5 170145145 170145179 -32940353 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1057 118 0 0 chr5 170145279 170145415 -32940117 + AluJb SINE Alu 156 291 -21 2119 219 147 11 chr5 170145418 170145666 -32939866 - L1MB4 LINE L1 -2115 4031 3818 2388 105 0 0 chr5 170145666 170145972 -32939560 - AluSx SINE Alu -6 306 1 2119 219 147 11 chr5 170145972 170146363 -32939169 - L1MB4 LINE L1 -2328 3818 3305 640 293 60 4 chr5 170146586 170146818 -32938714 - MIR SINE MIR -14 248 4 515 204 35 0 chr5 170147501 170147614 -32937918 + MIR SINE MIR 75 191 -71 1944 138 17 7 chr5 170147614 170147905 -32937627 + AluJb SINE Alu 1 294 -18 29 60 0 0 chr5 170147959 170148009 -32937523 + AT_rich Low_complexity Low_complexity 1 50 0 1544 243 28 16 chr5 170148261 170148693 -32936839 - L1MC4 LINE L1 -231 7811 7375 332 346 31 6 chr5 170149190 170149349 -32936183 - L1MC4a LINE L1 -1944 5864 5702 414 229 100 14 chr5 170150046 170150186 -32935346 - MER5A DNA MER1_type 0 189 38 340 272 79 26 chr5 170150451 170150565 -32934967 + MER5A DNA MER1_type 38 157 -32 276 319 35 42 chr5 170150563 170150707 -32934825 - MIR3 SINE MIR -42 166 24 * 291 277 109 8 chr5 170151618 170151737 -32933795 - MIR SINE MIR -55 153 23 646 311 71 33 chr5 170152197 170152676 -32932856 + L1MC4 LINE L1 7492 7988 -54 327 252 27 61 chr5 170154055 170154202 -32931330 + MIR3 SINE MIR 3 144 -64 296 48 24 0 chr5 170154832 170154874 -32930658 + (TA)n Simple_repeat Simple_repeat 2 44 0 24 32 0 0 chr5 170154919 170154950 -32930582 + AT_rich Low_complexity Low_complexity 1 31 0 2290 96 20 0 chr5 170156069 170156370 -32929162 + AluSq SINE Alu 1 307 -6 842 163 7 7 chr5 170156558 170156734 -32928798 + FRAM SINE Alu 1 40 0 277 344 48 0 chr5 170157661 170157786 -32927746 - L3 LINE CR1 -325 1252 1122 252 86 0 0 chr5 170158204 170158239 -32927293 + (ATG)n Simple_repeat Simple_repeat 3 37 0 421 274 51 38 chr5 170158246 170158403 -32927129 - MIR SINE MIR 0 262 104 1859 135 57 3 chr5 170158822 170159104 -32926428 + AluJb SINE Alu 1 297 -15 316 331 65 0 chr5 170159173 170159297 -32926235 - L3 LINE CR1 -472 1105 974 2254 99 0 0 chr5 170159898 170160204 -32925328 + AluSx SINE Alu 1 306 0 1847 158 22 0 chr5 170160379 170160677 -32924855 + AluJo SINE Alu 1 304 0 289 306 88 20 chr5 170161066 170161213 -32924319 + MIR3 SINE MIR 4 160 -48 1833 122 8 0 chr5 170161227 170161474 -32924058 + AluSx SINE Alu 2 250 -62 624 223 98 23 chr5 170161475 170161690 -32923842 + MER113 DNA MER1_type? 181 411 -110 2393 95 0 0 chr5 170162914 170163218 -32922314 + AluSg SINE Alu 1 304 -6 310 296 41 20 chr5 170163563 170163661 -32921871 + L2 LINE L2 3173 3272 0 188 250 42 69 chr5 170164706 170164778 -32920754 + MER5A DNA MER1_type 70 139 -50 988 254 98 10 chr5 170164803 170165110 -32920422 + MER46C DNA MER2_type 1 334 -4 2414 89 3 0 chr5 170165133 170165437 -32920095 + AluSg SINE Alu 1 305 -5 537 165 21 0 chr5 170165523 170165620 -32919912 + U13 snRNA snRNA 6 104 0 191 306 14 14 chr5 170165924 170165996 -32919536 + MIR3 SINE MIR 85 156 -52 346 280 47 0 chr5 170166420 170166527 -32919005 + MIR3 SINE MIR 49 160 -48 475 266 43 0 chr5 170166528 170166667 -32918865 - MER117 DNA MER1_type 0 197 53 293 342 30 16 chr5 170166967 170167134 -32918398 + MIR SINE MIR 5 147 -61 363 274 0 0 chr5 170167136 170167220 -32918312 - MER117 DNA MER1_type -3 194 111 182 272 25 74 chr5 170167812 170167893 -32917639 + L2 LINE L2 3229 3305 -8 929 219 16 5 chr5 170167972 170168159 -32917373 - MER58A DNA MER1_type -35 189 1 2078 152 3 0 chr5 170168380 170168676 -32916856 - AluJb SINE Alu -15 297 1 187 265 41 0 chr5 170169496 170169545 -32915987 - MIR SINE MIR -65 143 93 320 253 12 12 chr5 170170382 170170465 -32915067 + L2 LINE L2 3136 3218 -54 1627 216 133 22 chr5 170170555 170171250 -32914282 + L2 LINE L2 2375 3162 -151 5502 123 27 15 chr5 170171256 170172224 -32913308 - MER11C LTR ERVK 0 1071 1 394 195 0 23 chr5 170172245 170172332 -32913200 + L2 LINE L2 3180 3264 -49 2236 121 13 3 chr5 170172344 170172651 -32912881 + AluSp SINE Alu 1 310 -3 1959 139 0 63 chr5 170172690 170173006 -32912526 - AluJb SINE Alu -16 296 1 439 244 26 0 chr5 170173632 170173747 -32911785 - MIR SINE MIR -62 146 29 292 257 193 0 chr5 170173901 170174010 -32911522 + MIR SINE MIR 19 148 -114 433 284 60 27 chr5 170174480 170174663 -32910869 + MIR3 SINE MIR 15 203 -5 1827 170 0 23 chr5 170174808 170175108 -32910424 + AluJo SINE Alu 3 295 -17 1955 162 0 3 chr5 170175108 170175410 -32910122 - AluJo SINE Alu -11 301 1 32 26 0 0 chr5 170175410 170175449 -32910083 + AT_rich Low_complexity Low_complexity 1 39 0 607 181 7 97 chr5 170176336 170176389 -32909143 - MER45A DNA AcHobo -1439 142 86 2293 77 3 33 chr5 170176389 170176688 -32908844 + AluSx SINE Alu 6 295 -17 607 181 7 97 chr5 170176688 170176789 -32908743 - MER45A DNA AcHobo -1495 86 2 367 243 133 28 chr5 170176819 170176958 -32908574 + MIR SINE MIR 43 196 -62 416 187 32 49 chr5 170176959 170177082 -32908450 + FLAM_A SINE Alu 19 139 -3 2445 93 7 0 chr5 170177413 170177723 -32907809 + AluSq SINE Alu 2 313 0 561 258 38 38 chr5 170177849 170178035 -32907497 + MIR SINE MIR 77 262 0 1731 188 16 3 chr5 170178351 170178654 -32906878 + AluJb SINE Alu 1 307 -5 284 253 96 68 chr5 170179134 170179280 -32906252 - MIR3 SINE MIR -55 153 4 944 206 145 7 chr5 170179395 170179671 -32905861 - MER113 DNA MER1_type? -108 413 100 2032 151 7 3 chr5 170179798 170180102 -32905430 - AluJo SINE Alu -7 305 1 2357 104 0 13 chr5 170180396 170180703 -32904829 - AluSx SINE Alu -9 303 1 377 276 30 15 chr5 170181587 170181721 -32903811 - MIR SINE MIR -23 239 104 495 228 47 20 chr5 170181759 170181908 -32903624 + MIR SINE MIR 73 225 -37 180 224 269 0 chr5 170181926 170181993 -32903539 - MIR SINE MIR -70 192 108 197 308 256 0 chr5 170182306 170182439 -32903093 - L3 LINE CR1 -307 1270 1104 189 320 156 16 chr5 170182556 170182684 -32902848 + L2 LINE L2 3128 3273 -40 783 280 148 34 chr5 170182787 170183375 -32902157 - L2 LINE L2 0 3272 2624 218 247 178 63 chr5 170183395 170183569 -32901963 + MER91A DNA MER1_type 3 196 0 231 371 0 16 chr5 170184116 170184240 -32901292 + MIR SINE MIR 17 138 -70 621 253 96 25 chr5 170184268 170184308 -32901224 + MIR SINE MIR 37 73 -189 1278 120 107 58 chr5 170184308 170184533 -32900999 + MER46A DNA MER2_type 1 236 0 621 253 96 25 chr5 170184533 170184690 -32900842 + MIR SINE MIR 73 248 -14 463 302 179 5 chr5 170184913 170185125 -32900407 - MIR SINE MIR -1 261 13 712 300 83 0 chr5 170185604 170185834 -32899698 + MIR SINE MIR 6 254 -8 862 290 124 32 chr5 170186267 170186646 -32898886 + L2 LINE L2 2899 3312 -1 436 259 8 53 chr5 170186961 170187092 -32898440 + MIR SINE MIR 20 144 -118 576 267 14 27 chr5 170187251 170187397 -32898135 - MIR SINE MIR -8 254 111 547 272 38 43 chr5 170188461 170188645 -32896887 + MIR SINE MIR 80 262 0 1884 125 80 0 chr5 170189493 170189780 -32895752 - AluSp SINE Alu -3 310 1 188 237 0 0 chr5 170189914 170189952 -32895580 + MIR3 SINE MIR 161 198 -10 424 286 126 42 chr5 170189980 170190129 -32895403 + L1ME4a LINE L1 5620 5755 -366 2188 109 0 0 chr5 170190129 170190422 -32895110 + AluSx SINE Alu 1 293 -19 424 286 126 42 chr5 170190422 170190677 -32894855 + L1ME4a LINE L1 5755 6058 -63 294 246 238 8 chr5 170190705 170190827 -32894705 + MIR3 SINE MIR 55 204 -4 282 261 38 81 chr5 170190913 170191098 -32894434 - L2 LINE L2 -174 3098 2898 1976 169 12 48 chr5 170191487 170191766 -32893766 + L1MC1 LINE L1 5923 6184 -149 1525 173 50 7 chr5 170191766 170192049 -32893483 + AluJo SINE Alu 1 295 -17 1976 169 12 48 chr5 170192049 170192183 -32893349 + L1MC1 LINE L1 6184 6321 -12 402 21 0 0 chr5 170192184 170192231 -32893301 + (CA)n Simple_repeat Simple_repeat 1 47 0 2083 127 0 0 chr5 170192247 170192531 -32893001 + AluSx SINE Alu 6 289 -23 888 244 62 0 chr5 170192611 170192820 -32892712 + MIR SINE MIR 12 233 -29 242 342 68 8 chr5 170193580 170193697 -32891835 + L2 LINE L2 2931 3054 -218 528 302 12 0 chr5 170193802 170193974 -32891558 + Charlie8 DNA MER1_type 42 215 -2202 192 356 122 0 chr5 170194267 170194382 -32891150 + L2 LINE L2 3142 3270 -2 * 276 308 47 0 chr5 170194351 170194458 -32891074 - MIR SINE MIR -70 192 81 648 202 103 49 chr5 170194568 170194625 -32890907 - MIR SINE MIR -1 261 209 2106 112 30 0 chr5 170194625 170194920 -32890612 - AluSx SINE Alu -8 304 1 648 202 103 49 chr5 170194920 170195065 -32890467 - MIR SINE MIR -53 209 48 239 246 53 0 chr5 170195658 170195715 -32889817 + MIR SINE MIR 1 60 -202 1648 112 108 25 chr5 170195721 170195998 -32889534 - AluSq SINE Alu -12 301 2 1624 162 30 0 chr5 170196001 170196266 -32889266 - AluJb SINE Alu -18 294 22 670 301 14 23 chr5 170196291 170196507 -32889025 + MIR SINE MIR 46 259 -3 248 239 99 0 chr5 170196512 170196583 -32888949 - MIR SINE MIR -71 137 60 295 258 15 0 chr5 170196707 170196773 -32888759 - L2 LINE L2 -19 3253 3187 231 200 13 40 chr5 170197258 170197333 -32888199 + (CACCC)n Simple_repeat Simple_repeat 3 75 0 489 276 40 57 chr5 170198040 170198242 -32887290 - MIR SINE MIR -45 163 5 541 330 53 0 chr5 170198972 170199178 -32886354 - MIR SINE MIR -43 219 3 1893 126 31 0 chr5 170199399 170199685 -32885847 + AluSc SINE Alu 1 295 -14 207 366 11 0 chr5 170199810 170199903 -32885629 - MIR SINE MIR -24 238 145 383 272 66 0 chr5 170200199 170200335 -32885197 + MIR3 SINE MIR 18 162 -46 288 0 0 0 chr5 170200855 170200887 -32884645 + (CA)n Simple_repeat Simple_repeat 2 33 0 257 252 270 26 chr5 170201424 170201539 -32883993 + MIR3 SINE MIR 16 158 -50 207 199 0 23 chr5 170201732 170201797 -32883735 - MIR SINE MIR -86 122 61 184 233 0 0 chr5 170202698 170202741 -32882791 + MIR SINE MIR 36 78 -130 1539 165 10 34 chr5 170202794 170203091 -32882441 + AluJb SINE Alu 2 291 -21 253 254 16 0 chr5 170203122 170203185 -32882347 - MER96 DNA MER1_type? -110 65 2 224 216 57 0 chr5 170203200 170203265 -32882267 + MIR SINE MIR 84 141 -67 871 186 0 29 chr5 170203265 170203437 -32882095 + FRAM SINE Alu 1 166 -10 417 234 44 37 chr5 170203688 170203839 -32881693 - MIR SINE MIR -62 146 9 328 367 12 15 chr5 170204117 170204326 -32881206 - MIR3 SINE MIR -50 212 3 708 316 53 4 chr5 170204366 170204613 -32880919 - MIR SINE MIR 0 262 4 246 340 50 0 chr5 170204846 170204946 -32880586 + MIR3 SINE MIR 83 187 -21 896 241 33 41 chr5 170205698 170205737 -32879795 - MIR SINE MIR -14 248 210 2202 112 3 13 chr5 170205737 170206049 -32879483 - AluSp SINE Alu -3 310 2 896 241 33 41 chr5 170206049 170206254 -32879278 - MIR SINE MIR -52 210 6 1134 258 134 25 chr5 170206728 170207584 -32877948 + L2 LINE L2 2356 3311 -2 382 286 129 38 chr5 170207580 170207790 -32877742 - L3 LINE CR1 -541 1036 808 * 322 313 37 30 chr5 170208283 170208417 -32877115 + MIR3 SINE MIR 6 140 -68 201 233 11 89 chr5 170208945 170209035 -32876497 + MER5A DNA MER1_type 78 160 -29 560 288 234 0 chr5 170209796 170210070 -32875462 - MER102b DNA MER1_type -3 338 1 203 330 17 25 chr5 170210078 170210196 -32875336 - L2 LINE L2 -160 3112 2996 207 293 67 0 chr5 170210744 170210819 -32874713 - MIR SINE MIR -72 136 57 680 254 88 12 chr5 170210821 170211061 -32874471 - MIR SINE MIR -3 259 2 328 288 119 0 chr5 170211751 170211869 -32873663 + MIR3 SINE MIR 74 205 -3 2262 91 3 22 chr5 170211883 170212201 -32873331 + AluSx SINE Alu 1 312 0 320 330 30 0 chr5 170212607 170212707 -32872825 + MIR SINE MIR 49 151 -57 819 180 0 0 chr5 170212849 170212977 -32872555 - FLAM_A SINE Alu -4 129 2 218 337 36 0 chr5 170213017 170213100 -32872432 + MIR SINE MIR 77 162 -100 336 196 91 105 chr5 170213346 170213489 -32872043 + MIR SINE MIR 111 251 -11 2361 93 0 0 chr5 170213526 170213838 -32871694 + AluSq SINE Alu 1 312 -1 2236 108 0 0 chr5 170213844 170214140 -32871392 + AluSg SINE Alu 1 296 -14 2217 102 30 0 chr5 170214147 170214450 -32871082 + AluSx SINE Alu 1 312 0 328 278 40 60 chr5 170214451 170214569 -32870963 + L1M4 LINE L1 3085 3201 -2945 1810 165 10 16 chr5 170214569 170214872 -32870660 + AluJb SINE Alu 1 301 -11 328 278 40 60 chr5 170214872 170214904 -32870628 + L1M4 LINE L1 3201 3232 -2914 2244 99 3 0 chr5 170215013 170215307 -32870225 - AluSx SINE Alu -17 295 1 2433 99 0 0 chr5 170215725 170216038 -32869494 + AluSq SINE Alu 1 313 0 838 205 23 6 chr5 170216038 170216209 -32869323 - MER5A DNA MER1_type -15 174 1 380 283 21 41 chr5 170216209 170216351 -32869181 - L2 LINE L2 -204 3068 2930 479 321 62 23 chr5 170216583 170216888 -32868644 - L3 LINE CR1 -81 1496 1180 390 257 47 58 chr5 170216857 170217028 -32868504 + MIR SINE MIR 94 262 0 * 512 262 120 33 chr5 170216994 170217177 -32868355 - MIR SINE MIR -56 206 8 239 209 0 0 chr5 170217557 170217600 -32867932 + MIR SINE MIR 96 138 -70 530 297 85 9 chr5 170217705 170217917 -32867615 - MIR SINE MIR -1 261 34 261 354 35 14 chr5 170219245 170219389 -32866143 - L3 LINE CR1 -225 1352 1206 395 239 186 78 chr5 170219605 170219772 -32865760 + MIR SINE MIR 46 230 -32 194 303 63 21 chr5 170219788 170219930 -32865602 + L2 LINE L2 2716 2863 -451 194 333 0 0 chr5 170221055 170221109 -32864423 - L2 LINE L2 -4 3309 3256 201 121 0 0 chr5 170221659 170221692 -32863840 + (A)n Simple_repeat Simple_repeat 1 33 0 508 232 194 33 chr5 170221727 170221938 -32863594 + MIR SINE MIR 14 258 -4 192 267 38 76 chr5 170221965 170222070 -32863462 + L2 LINE L2 1350 1450 -1864 * 427 237 0 21 chr5 170221995 170222092 -32863440 - MIR SINE MIR -108 154 60 215 239 18 53 chr5 170222574 170222687 -32862845 + (CCCG)n Simple_repeat Simple_repeat 4 112 0 25 31 0 0 chr5 170222696 170222728 -32862804 + GC_rich Low_complexity Low_complexity 1 32 0 306 248 25 25 chr5 170222915 170223036 -32862496 + C-rich Low_complexity Low_complexity 6 126 0 35 54 0 0 chr5 170223282 170223338 -32862194 + GC_rich Low_complexity Low_complexity 1 56 0 283 293 133 22 chr5 170224033 170224205 -32861327 - MIR3 SINE MIR -63 145 10 2425 63 0 7 chr5 170224363 170224665 -32860867 + AluSg SINE Alu 1 300 -10 1961 108 23 43 chr5 170224709 170225014 -32860518 + AluSx SINE Alu 1 299 -13 2121 116 3 0 chr5 170225014 170225306 -32860226 + AluSg SINE Alu 1 293 -17 1946 91 91 0 chr5 170225306 170225582 -32859950 + AluY SINE Alu 1 301 -10 252 294 54 43 chr5 170225606 170225698 -32859834 - MER5A DNA MER1_type -29 160 68 211 277 0 31 chr5 170226275 170226340 -32859192 - L2 LINE L2 -25 3247 3185 2300 97 0 0 chr5 170226486 170226784 -32858748 - AluSx SINE Alu -14 298 1 180 377 53 0 chr5 170227327 170227441 -32858091 - MER5A DNA MER1_type -32 157 38 354 319 171 28 chr5 170227483 170227757 -32857775 + L2 LINE L2 2212 2446 -868 2232 110 0 7 chr5 170227757 170228067 -32857465 - AluSg1 SINE Alu -1 308 1 354 319 171 28 chr5 170228067 170228249 -32857283 + L2 LINE L2 2446 2733 -581 25 0 0 0 chr5 170228347 170228372 -32857160 + AT_rich Low_complexity Low_complexity 1 25 0 893 239 28 14 chr5 170228372 170228590 -32856942 + MIR SINE MIR 21 241 -21 1717 171 75 6 chr5 170228599 170228921 -32856611 + MER2 DNA MER2_type 1 344 0 1632 114 64 36 chr5 170228968 170229248 -32856284 - AluJb SINE Alu 0 312 25 844 203 0 23 chr5 170229253 170229430 -32856102 - FRAM SINE Alu -5 171 1 535 357 52 8 chr5 170229431 170229683 -32855849 + L2 LINE L2 3010 3272 0 247 406 0 9 chr5 170229832 170229938 -32855594 - L2 LINE L2 -63 3209 3105 1522 167 6 85 chr5 170230102 170230304 -32855228 - AluJb SINE Alu -8 304 88 1496 174 20 0 chr5 170230304 170230551 -32854981 + AluJb SINE Alu 46 297 -15 2281 83 0 13 chr5 170230553 170230854 -32854678 + AluSx SINE Alu 2 298 -14 2372 56 7 20 chr5 170230856 170231159 -32854373 + AluSq SINE Alu 3 301 -12 1522 167 6 85 chr5 170231159 170231280 -32854252 - AluJb SINE Alu -226 86 1 186 384 41 0 chr5 170231337 170231410 -32854122 + L2 LINE L2 2973 3048 -224 10024 107 2 22 chr5 170245842 170247271 -32838261 - LTR46-int LTR ERV1 -2180 4805 3405 3247 197 30 57 chr5 170247283 170248175 -32837357 - LTR5 LTR ERVK -14 955 88 2324 36 11 0 chr5 170248275 170248556 -32836976 + L1PA5 LINE L1 5870 6153 -1 635 116 0 11 chr5 170248606 170248701 -32836831 + MER4A LTR ERV1 5 98 -566 1766 131 3 77 chr5 170248701 170249074 -32836458 + MER4A LTR ERV1 261 664 0 248 148 0 74 chr5 170249074 170249128 -32836404 - MLT1C LTR MaLR -414 53 4 970 248 108 46 chr5 170249135 170249441 -32836091 - L1MDa LINE L1 -6129 411 87 2049 232 47 52 chr5 170249455 170249863 -32835669 + L1M4b LINE L1 31 437 -6422 1603 192 3 7 chr5 170249863 170250150 -32835382 + AluJo SINE Alu 13 298 -14 2049 232 47 52 chr5 170250150 170250319 -32835213 + L1M4b LINE L1 437 605 -6254 237 258 0 0 chr5 170250519 170250585 -32834947 + A-rich Low_complexity Low_complexity 1 66 0 9861 119 40 58 chr5 170250685 170252677 -32832855 + MER4-int LTR ERV1 4641 6596 -2 43738 53 3 0 chr5 170252709 170258450 -32827082 + L1P2 LINE L1 11 5762 -392 3981 212 27 56 chr5 170258806 170259728 -32825804 + L1M4b LINE L1 587 1534 -5325 632 226 0 0 chr5 170259728 170259843 -32825689 + FLAM_A SINE Alu 3 117 -16 195 42 0 0 chr5 170259849 170259873 -32825659 + (TAA)n Simple_repeat Simple_repeat 2 25 0 3981 212 27 56 chr5 170259873 170260001 -32825531 + L1M4b LINE L1 1539 1614 -5245 1009 110 0 0 chr5 170260012 170260139 -32825393 + AluY SINE Alu 1 127 -184 3032 60 0 0 chr5 170260139 170260524 -32825008 + L1P LINE L1 2267 2651 -3495 1008 142 53 6 chr5 170260524 170260693 -32824839 - MSTA LTR MaLR -251 177 1 850 226 119 38 chr5 170260921 170261240 -32824292 - MLT1C LTR MaLR -122 345 1 610 223 89 52 chr5 170261249 170261540 -32823992 - L1MC5 LINE L1 -52 7909 7608 201 167 0 0 chr5 170261568 170261604 -32823928 + T-rich Low_complexity Low_complexity 3 38 0 677 249 63 30 chr5 170261788 170262025 -32823507 + MIR SINE MIR 4 248 -14 475 300 22 26 chr5 170262241 170262468 -32823064 + L2 LINE L2 2528 2753 -561 2408 91 7 0 chr5 170262762 170263070 -32822462 - AluSp SINE Alu -3 310 1 1709 154 75 4 chr5 170263524 170263803 -32821729 + AluSx SINE Alu 1 299 -13 207 100 0 0 chr5 170263803 170263833 -32821699 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 742 288 58 0 chr5 170263873 170264113 -32821419 - MIR SINE MIR 0 262 9 27 49 0 0 chr5 170264334 170264375 -32821157 + AT_rich Low_complexity Low_complexity 1 41 0 22 56 0 0 chr5 170266337 170266373 -32819159 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 170266553 170266581 -32818951 + AT_rich Low_complexity Low_complexity 1 28 0 1929 162 25 52 chr5 170266692 170267093 -32818439 + MLT1B LTR MaLR 1 390 0 305 220 110 55 chr5 170267920 170268029 -32817503 + MLT1J2 LTR MaLR 319 433 -17 1914 177 0 0 chr5 170268188 170268500 -32817032 + AluJb SINE Alu 1 312 0 1432 229 87 126 chr5 170268878 170270373 -32815159 + L1M4b LINE L1 365 1793 -5062 1022 205 88 15 chr5 170270370 170270633 -32814899 + L1MCa LINE L1 19 300 -6126 * 805 159 14 0 chr5 170270657 170270795 -32814737 - MER82 DNA MER2_type -513 140 1 2591 133 20 91 chr5 170272244 170272739 -32812793 - LTR46 LTR ERV1 0 460 1 2572 153 80 0 chr5 170273307 170273733 -32811799 - LTR46 LTR ERV1 0 460 1 4457 123 14 1 chr5 170273733 170274384 -32811148 - LTR46-int LTR ERV1 0 6985 6327 447 105 40 40 chr5 170274512 170274588 -32810944 - LTR46-int LTR ERV1 -5000 1985 1910 * 2681 136 13 15 chr5 170274587 170275051 -32810481 - LTR46-int LTR ERV1 -5700 1285 823 3746 138 9 4 chr5 170275149 170275706 -32809826 - LTR46-int LTR ERV1 -6425 560 1 1758 158 137 0 chr5 170275757 170276086 -32809446 - LTR46 LTR ERV1 0 460 87 2500 153 19 33 chr5 170276086 170276571 -32808961 - MER51A-int LTR ERV1 -3121 2096 1619 16282 119 37 22 chr5 170276573 170278627 -32806905 - MER51A-int LTR ERV1 -4509 3307 1285 2245 102 0 25 chr5 170278627 170278941 -32806591 - AluSg SINE Alu -2 308 3 16282 119 37 22 chr5 170278941 170278953 -32806579 - MER51A-int LTR ERV1 -6531 1285 1275 2133 94 0 63 chr5 170278953 170279272 -32806260 - AluSc SINE Alu -10 299 1 16282 119 37 22 chr5 170279272 170280359 -32805173 - MER51A-int LTR ERV1 -6541 1275 1 2394 107 85 15 chr5 170280359 170280715 -32804817 - MER51A LTR ERV1 0 634 157 2500 74 0 0 chr5 170280715 170281026 -32804506 - AluY SINE Alu 0 311 1 2394 107 85 15 chr5 170281026 170281195 -32804337 - MER51A LTR ERV1 -477 157 1 1005 230 110 60 chr5 170282473 170282856 -32802676 + MLT2D LTR ERVL 13 414 0 2647 129 52 23 chr5 170282875 170283210 -32802322 - L1MB3 LINE L1 -168 6015 5662 2019 134 3 7 chr5 170283210 170283508 -32802024 - AluSx SINE Alu -13 299 3 2647 129 52 23 chr5 170283508 170283615 -32801917 - L1MB3 LINE L1 -521 5662 5560 21 0 0 0 chr5 170283776 170283797 -32801735 + AT_rich Low_complexity Low_complexity 1 21 0 183 317 66 72 chr5 170283916 170284083 -32801449 + L2 LINE L2 3016 3181 -91 357 279 58 12 chr5 170284606 170284771 -32800761 - L1MC/D LINE L1 -297 5824 5671 1000 196 0 12 chr5 170284861 170285029 -32800503 + FRAM SINE Alu 1 166 0 239 356 82 41 chr5 170285209 170285403 -32800129 - L2 LINE L2 -42 3230 3029 314 267 0 0 chr5 170285411 170285501 -32800031 - MIR SINE MIR 0 262 173 815 172 0 0 chr5 170285502 170285618 -32799914 + FLAM_C SINE Alu 2 117 -26 219 103 0 0 chr5 170285621 170285660 -32799872 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 235 191 0 0 chr5 170285686 170285733 -32799799 - MIR SINE MIR -117 145 99 262 338 219 15 chr5 170285785 170286403 -32799129 - L2 LINE L2 -258 3014 2273 854 158 0 20 chr5 170286442 170286588 -32798944 + FLAM_C SINE Alu 1 143 0 2170 119 33 0 chr5 170286591 170286893 -32798639 + AluSx SINE Alu 1 312 0 290 290 126 19 chr5 170286955 170287246 -32798286 + L1MC4a LINE L1 5610 5713 -465 340 241 159 53 chr5 170288046 170288216 -32797316 - MIR SINE MIR -8 254 67 356 235 204 15 chr5 170288978 170289110 -32796422 + MIR SINE MIR 102 258 -4 287 118 20 20 chr5 170289486 170289537 -32795995 + MIR SINE MIR 75 125 -83 485 246 214 25 chr5 170289557 170289761 -32795771 + MIR SINE MIR 15 261 -1 278 325 35 9 chr5 170289927 170290041 -32795491 - MIR3 SINE MIR -11 197 81 282 268 273 16 chr5 170290231 170290425 -32795107 - MIR SINE MIR 0 262 19 318 321 9 18 chr5 170290973 170291082 -32794450 + L2 LINE L2 3205 3312 -1 326 330 40 14 chr5 170291103 170291256 -32794276 + MIR SINE MIR 19 173 -66 354 254 96 17 chr5 170291930 170292083 -32793449 + MIR SINE MIR 22 183 -62 2556 76 0 0 chr5 170292197 170292501 -32793031 - AluSq SINE Alu -9 304 1 315 264 240 8 chr5 170292503 170292632 -32792900 + MIR SINE MIR 102 260 -2 567 207 64 29 chr5 170292657 170292797 -32792735 - MIR SINE MIR -70 192 48 373 296 92 14 chr5 170292989 170293131 -32792401 + MIR3 SINE MIR 8 160 -48 489 293 128 0 chr5 170293132 170293296 -32792236 - MER5A DNA MER1_type -1 188 4 523 279 52 39 chr5 170293723 170293956 -32791576 - L2 LINE L2 -1 3312 3077 400 325 48 74 chr5 170294016 170294478 -32791054 + L2 LINE L2 2818 3267 -5 2518 72 0 3 chr5 170294516 170294822 -32790710 + AluSq SINE Alu 1 305 -8 257 271 0 24 chr5 170295013 170295098 -32790434 - MIR SINE MIR -61 147 65 6790 195 30 58 chr5 170295613 170297498 -32788034 + L1 LINE L1 2124 3955 -2191 11893 175 14 5 chr5 170297542 170300357 -32785175 - L1P4 LINE L1 -341 5820 2986 4948 204 91 19 chr5 170300357 170302085 -32783447 + L1P4 LINE L1 2545 4428 -3156 3717 237 124 23 chr5 170302081 170302454 -32783078 - L1MEc LINE L1 -1508 4707 4373 * 2496 120 31 17 chr5 170302454 170302812 -32782720 - THE1B LTR MaLR -1 363 1 3717 237 124 23 chr5 170302812 170304843 -32780689 - L1MEc LINE L1 -1842 4373 2088 2602 89 17 50 chr5 170304990 170305393 -32780139 + Tigger1 DNA MER2_type 949 1338 -1080 240 146 21 0 chr5 170305375 170305423 -32780109 + Alu SINE Alu 86 134 -168 * 1622 176 38 3 chr5 170305426 170305715 -32779817 + AluJo SINE Alu 1 299 -13 1871 165 3 13 chr5 170305772 170306081 -32779451 + AluSx SINE Alu 3 308 -4 341 287 8 25 chr5 170307017 170307139 -32778393 - AluJb SINE Alu -4 298 179 356 103 39 64 chr5 170307295 170307373 -32778159 - L1MB4 LINE L1 -118 6062 5987 903 109 28 1 chr5 170307424 170307568 -32777964 - L1MB4 LINE L1 -201 5979 5834 494 58 43 0 chr5 170307578 170307647 -32777885 - L1MB4 LINE L1 -6 6174 6103 651 323 136 16 chr5 170307842 170308092 -32777440 - L2 LINE L2 -24 3289 3070 2207 100 10 3 chr5 170308092 170308392 -32777140 - AluSq SINE Alu -11 302 1 651 323 136 16 chr5 170308392 170308575 -32776957 - L2 LINE L2 -243 3070 2804 1736 179 0 10 chr5 170308604 170308923 -32776609 - AluJb SINE Alu 0 312 1 27 0 0 0 chr5 170309156 170309183 -32776349 + AT_rich Low_complexity Low_complexity 1 27 0 2071 148 7 0 chr5 170309200 170309504 -32776028 - AluJb SINE Alu -6 306 1 799 174 25 0 chr5 170309520 170309641 -32775891 - FLAM_C SINE Alu -17 126 3 1997 91 73 14 chr5 170309750 170310036 -32775496 + AluSq SINE Alu 1 303 -10 1618 161 72 14 chr5 170310045 170310324 -32775208 + AluJb SINE Alu 1 295 -17 2220 96 0 10 chr5 170410648 170410985 -32674547 - AluSq SINE Alu 0 313 1 1819 158 6 40 chr5 170410988 170411177 -32674355 - AluJb SINE Alu 0 312 137 2164 107 0 3 chr5 170411177 170411476 -32674056 - AluSx SINE Alu -14 298 1 1819 158 6 40 chr5 170411476 170411609 -32673923 - AluJb SINE Alu -175 137 1 408 214 45 0 chr5 170411613 170411702 -32673830 + L2 LINE L2 3221 3313 0 844 222 7 44 chr5 170411910 170412179 -32673353 - L2 LINE L2 -285 3028 2770 2555 42 0 0 chr5 170412188 170412495 -32673037 - AluY SINE Alu -4 307 1 2029 133 3 3 chr5 170412506 170412814 -32672718 - AluSg SINE Alu 0 310 3 1816 129 0 73 chr5 170413530 170413697 -32671835 - AluJo SINE Alu -18 294 116 216 0 0 0 chr5 170413697 170413721 -32671811 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1675 86 147 0 chr5 170413721 170413966 -32671566 - AluSg SINE Alu -29 281 1 1816 129 0 73 chr5 170413966 170414114 -32671418 - AluJo SINE Alu -194 118 1 361 326 125 14 chr5 170414120 170414525 -32671007 + L2 LINE L2 2696 3149 -164 192 306 0 0 chr5 170414593 170414642 -32670890 + L2 LINE L2 3262 3310 -3 766 151 0 0 chr5 170415008 170415127 -32670405 + AluJo/FLAM SINE Alu 1 119 -193 1659 67 0 0 chr5 170415127 170415337 -32670195 - AluY SINE Alu -16 295 86 1005 221 22 8 chr5 170415427 170415780 -32669752 - L2 LINE L2 -268 3045 2694 249 289 0 48 chr5 170415927 170416010 -32669522 - MIR SINE MIR -86 122 44 1727 143 13 39 chr5 170416095 170416402 -32669130 - AluJo SINE Alu -13 299 1 2111 96 28 0 chr5 170416411 170416702 -32668830 - AluSx SINE Alu -13 299 1 1144 173 0 5 chr5 170417157 170417332 -32668200 - AluJo SINE Alu -4 308 133 1612 150 10 49 chr5 170417332 170417639 -32667893 - AluJo SINE Alu -17 295 1 1144 173 0 5 chr5 170417639 170417660 -32667872 - AluJo SINE Alu -179 133 113 1732 126 0 0 chr5 170418100 170418331 -32667201 - AluSx SINE Alu -81 231 1 218 326 41 109 chr5 170418495 170418716 -32666816 + MIR SINE MIR 38 243 -19 1805 114 12 0 chr5 170418727 170418981 -32666551 - AluSx SINE Alu -17 295 39 306 300 63 58 chr5 170418982 170419172 -32666360 + L2 LINE L2 3122 3312 -1 315 234 64 11 chr5 170419172 170419266 -32666266 - MIR3 SINE MIR -29 179 81 464 142 123 123 chr5 170419275 170419397 -32666135 - MER58C DNA MER1_type -2214 206 85 2143 90 0 0 chr5 170419397 170419675 -32665857 + AluSg SINE Alu 1 278 -32 522 0 0 0 chr5 170419675 170419733 -32665799 + (TAAAA)n Simple_repeat Simple_repeat 1 58 0 464 142 123 123 chr5 170419733 170419771 -32665761 - MER58C DNA MER1_type -2333 87 45 2206 113 0 0 chr5 170419911 170420222 -32665310 - AluSx SINE Alu -1 311 1 1685 135 0 38 chr5 170420238 170420505 -32665027 - AluSx SINE Alu -55 257 1 310 248 24 56 chr5 170420572 170420697 -32664835 - MIR SINE MIR -55 153 33 1681 174 0 20 chr5 170420957 170421261 -32664271 + AluJo SINE Alu 1 298 -14 367 212 46 24 chr5 170421268 170421403 -32664129 - MER106A DNA MER1_type -21 215 110 250 234 32 39 chr5 170421403 170421557 -32663975 + (TA)n Simple_repeat Simple_repeat 2 154 0 2164 74 7 11 chr5 170421594 170421901 -32663631 - AluSp SINE Alu 0 310 5 709 134 0 99 chr5 170421932 170421969 -32663563 + AluJo/FLAM SINE Alu 1 40 -262 2444 44 0 7 chr5 170421969 170422267 -32663265 - AluY SINE Alu -15 296 1 709 134 0 99 chr5 170422267 170422371 -32663161 + AluJo/FLAM SINE Alu 40 128 -174 2451 46 0 40 chr5 170422696 170423020 -32662512 - AluY SINE Alu 0 311 1 572 251 37 31 chr5 170423047 170423172 -32662360 + MER3 DNA MER1_type 8 136 -73 2001 150 7 0 chr5 170423172 170423479 -32662053 - AluJb SINE Alu -3 309 1 572 251 37 31 chr5 170423479 170423544 -32661988 + MER3 DNA MER1_type 136 199 -10 1977 143 3 0 chr5 170423652 170423952 -32661580 + AluSq SINE Alu 1 301 -12 1812 166 27 22 chr5 170423974 170424341 -32661191 + L1MB3 LINE L1 5813 6181 -2 971 182 0 0 chr5 170424407 170424566 -32660966 + AluJb SINE Alu 134 292 -20 1714 122 3 98 chr5 170424569 170424896 -32660636 + AluY SINE Alu 1 296 -15 810 195 27 0 chr5 170424934 170425119 -32660413 + L1M4 LINE L1 3968 4157 -1989 1824 188 0 0 chr5 170425121 170425425 -32660107 + AluJo SINE Alu 1 304 -8 1116 121 36 90 chr5 170425426 170425683 -32659849 + AluSg/x SINE Alu 86 312 0 2078 103 7 3 chr5 170425813 170426105 -32659427 - AluSx SINE Alu -19 293 1 275 266 32 32 chr5 170426109 170426203 -32659329 - MIR SINE MIR -57 205 112 185 188 0 0 chr5 170426266 170426298 -32659234 + L2 LINE L2 3266 3297 -16 1890 110 46 25 chr5 170426867 170427014 -32658518 - AluJb SINE Alu -19 293 151 2249 79 3 13 chr5 170427014 170427317 -32658215 - AluSp SINE Alu -11 302 3 1890 110 46 25 chr5 170427317 170427451 -32658081 - AluJb SINE Alu -161 151 6 262 286 40 48 chr5 170427464 170427518 -32658014 - MIR3 SINE MIR -51 157 104 2519 44 0 0 chr5 170427518 170427814 -32657718 + AluY SINE Alu 1 296 -15 262 286 40 48 chr5 170427814 170427885 -32657647 - MIR3 SINE MIR -104 104 33 2261 100 0 3 chr5 170427997 170428306 -32657226 + AluSx SINE Alu 1 308 -4 288 328 47 8 chr5 170428361 170428489 -32657043 - MIR SINE MIR -50 212 80 381 239 23 0 chr5 170428988 170429076 -32656456 + MIR SINE MIR 107 196 -66 2039 113 0 3 chr5 170429080 170429410 -32656122 - AluSx SINE Alu 0 329 1 275 185 0 0 chr5 170429440 170429494 -32656038 - FLAM_A SINE Alu -7 126 73 1893 111 0 22 chr5 170429495 170429765 -32655767 - AluSx SINE Alu -48 264 1 470 238 71 24 chr5 170429769 170429895 -32655637 - MIR SINE MIR -117 145 14 408 279 96 15 chr5 170430322 170430458 -32655074 - MIR3 SINE MIR -39 169 23 2360 92 0 6 chr5 170430528 170430842 -32654690 - AluSx SINE Alu 0 312 1 1734 153 3 56 chr5 170430842 170431005 -32654527 - AluJo SINE Alu -17 295 153 2465 77 0 0 chr5 170431005 170431315 -32654217 - AluSg SINE Alu 0 310 1 1734 153 3 56 chr5 170431315 170431461 -32654071 - AluJo SINE Alu -159 153 1 1206 289 40 30 chr5 170431534 170432006 -32653526 + L2 LINE L2 2602 3082 -231 2365 80 0 0 chr5 170432006 170432308 -32653224 - AluY SINE Alu -9 302 1 1206 289 40 30 chr5 170432308 170432538 -32652994 + L2 LINE L2 3082 3308 -5 251 219 18 26 chr5 170432595 170432629 -32652903 + GA-rich Low_complexity Low_complexity 1 34 -79 2119 88 50 0 chr5 170432629 170432926 -32652606 + AluSx SINE Alu 1 312 0 251 219 18 26 chr5 170432926 170432970 -32652562 + GA-rich Low_complexity Low_complexity 34 77 -36 2335 105 0 3 chr5 170432970 170433284 -32652248 + AluSp SINE Alu 1 313 0 1493 98 184 23 chr5 170433293 170433549 -32651983 + AluSg SINE Alu 1 297 -3 251 219 18 26 chr5 170433549 170433573 -32651959 + GA-rich Low_complexity Low_complexity 85 113 0 1014 99 0 0 chr5 170434085 170434216 -32651316 + FLAM_C SINE Alu 1 131 -2 342 0 0 0 chr5 170434219 170434257 -32651275 + (CA)n Simple_repeat Simple_repeat 2 39 0 419 86 0 57 chr5 170434261 170434331 -32651201 + FLAM_A SINE Alu 69 134 -8 378 0 0 0 chr5 170434336 170434378 -32651154 + (CA)n Simple_repeat Simple_repeat 2 43 0 1933 134 0 39 chr5 170434379 170434686 -32650846 + AluJo SINE Alu 1 295 -17 309 283 116 14 chr5 170434814 170434952 -32650580 + L2 LINE L2 2827 2978 -335 207 296 99 0 chr5 170434983 170435054 -32650478 - MIR SINE MIR -6 256 179 886 204 32 61 chr5 170435213 170435345 -32650187 - L1MB7 LINE L1 -2 6172 6038 1871 119 0 4 chr5 170435345 170435606 -32649926 - AluSq SINE Alu -53 260 1 886 204 32 61 chr5 170435606 170435746 -32649786 - L1MB7 LINE L1 -136 6038 5927 2177 111 0 0 chr5 170435746 170436044 -32649488 + AluSg SINE Alu 13 310 0 886 204 32 61 chr5 170436044 170436140 -32649392 - L1MB7 LINE L1 -247 5927 5830 402 192 0 0 chr5 170436147 170436225 -32649307 - AluSq SINE Alu 0 312 235 1344 75 27 32 chr5 170436225 170436412 -32649120 - AluSq SINE Alu -127 186 1 2150 135 0 0 chr5 170436440 170436751 -32648781 - AluJb SINE Alu -1 311 1 872 159 0 0 chr5 170436753 170436885 -32648647 - AluJo/FLAM SINE Alu -169 133 2 524 196 35 14 chr5 170436886 170437029 -32648503 - L1MB7 LINE L1 -353 5821 5676 354 316 60 30 chr5 170437050 170437183 -32648349 + L2 LINE L2 3136 3272 0 226 262 36 48 chr5 170437212 170437296 -32648236 + MIR SINE MIR 63 145 -63 337 305 103 23 chr5 170437397 170437571 -32647961 - L2 LINE L2 -7 3306 3119 391 241 60 38 chr5 170437605 170437738 -32647794 - MIR SINE MIR -81 181 46 2296 57 13 13 chr5 170437751 170438052 -32647480 - AluY SINE Alu -10 301 1 1892 146 0 0 chr5 170438059 170438347 -32647185 - AluJo SINE Alu -24 288 1 327 215 151 0 chr5 170439774 170439867 -32645665 + MIR SINE MIR 80 186 -76 211 393 41 0 chr5 170439884 170440006 -32645526 + MIR3 SINE MIR 38 164 -44 2204 77 0 3 chr5 170440892 170441210 -32644322 - AluSp SINE Alu 0 317 1 1558 152 7 69 chr5 170441216 170441546 -32643986 - AluJb SINE Alu 0 311 1 2247 104 3 0 chr5 170441548 170441857 -32643675 - AluSx SINE Alu -2 310 1 586 238 0 77 chr5 170441877 170442045 -32643487 + MIR SINE MIR 2 156 -106 2441 47 0 3 chr5 170442168 170442465 -32643067 + AluY SINE Alu 1 296 -15 500 129 35 0 chr5 170442656 170442741 -32642791 + AluY SINE Alu 217 304 -7 2011 94 38 56 chr5 170442759 170443078 -32642454 - AluSq SINE Alu 0 313 1 416 343 54 0 chr5 170443121 170443287 -32642245 + L1M4 LINE L1 2931 3105 -3041 229 300 0 0 chr5 170443447 170443507 -32642025 - L3 LINE CR1 -99 1478 1419 2626 45 0 0 chr5 170443508 170443819 -32641713 - AluY SINE Alu 0 311 1 449 354 31 26 chr5 170443851 170444077 -32641455 - L2 LINE L2 -31 3241 3015 331 242 31 3 chr5 170444075 170444194 -32641338 + MIR SINE MIR 31 153 -55 * 1126 176 5 14 chr5 170444225 170444446 -32641086 + AluJo SINE Alu 94 312 0 2182 62 11 0 chr5 170444458 170444731 -32640801 + AluSq SINE Alu 14 289 -24 2514 40 7 0 chr5 170444772 170445070 -32640462 - AluY SINE Alu -11 300 1 631 233 51 0 chr5 170445260 170445436 -32640096 - MER20 DNA MER1_type -18 201 17 1655 105 4 16 chr5 170445512 170445759 -32639773 - AluSx SINE Alu -14 298 55 1146 67 7 0 chr5 170445759 170445903 -32639629 - AluSq/x SINE Alu -168 145 1 216 0 0 0 chr5 170445905 170445929 -32639603 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1434 154 85 0 chr5 170445933 170446192 -32639340 - AluJo SINE Alu -31 281 1 297 329 28 8 chr5 170446221 170446386 -32639146 - MIR SINE MIR -62 146 22 204 254 233 19 chr5 170446449 170446574 -32638958 - MIR SINE MIR -61 147 41 2137 114 0 20 chr5 170447463 170447769 -32637763 - AluSx SINE Alu -12 300 1 356 356 8 0 chr5 170447809 170447974 -32637558 + MIR SINE MIR 25 189 -63 887 211 54 15 chr5 170448003 170448207 -32637325 + MER20 DNA MER1_type 5 216 -3 1928 125 44 7 chr5 170448234 170448531 -32637001 + AluJo SINE Alu 1 308 -4 644 282 84 0 chr5 170448752 170448954 -32636578 + MER20 DNA MER1_type 1 219 0 244 225 26 40 chr5 170449902 170450053 -32635479 + (CATG)n Simple_repeat Simple_repeat 2 150 0 446 378 0 0 chr5 170450058 170450222 -32635310 + (CA)n Simple_repeat Simple_repeat 1 164 0 261 265 0 0 chr5 170450242 170450325 -32635207 + (CA)n Simple_repeat Simple_repeat 1 83 0 577 266 57 0 chr5 170450986 170451163 -32634369 + MER20 DNA MER1_type 33 219 0 693 218 68 5 chr5 170451392 170451598 -32633934 + MER20 DNA MER1_type 1 219 0 206 325 24 12 chr5 170451703 170451786 -32633746 - MER5A DNA MER1_type -45 144 61 1735 146 23 0 chr5 170451832 170452093 -32633439 + AluJo SINE Alu 1 267 -45 2406 76 0 0 chr5 170452099 170452403 -32633129 + AluSx SINE Alu 1 304 -8 1020 121 0 38 chr5 170452965 170453153 -32632379 - AluSp SINE Alu 0 316 135 2186 109 0 0 chr5 170453161 170453455 -32632077 - AluSx SINE Alu -18 294 1 260 333 15 30 chr5 170453818 170453950 -32631582 + MIR SINE MIR 16 145 -63 2348 91 0 0 chr5 170454560 170454858 -32630674 + AluSx SINE Alu 1 298 -14 2132 115 0 0 chr5 170454858 170455145 -32630387 + AluSg SINE Alu 1 288 -22 2376 59 0 0 chr5 170455157 170455444 -32630088 + AluY SINE Alu 12 298 -13 476 97 0 0 chr5 170455456 170455518 -32630014 + Alu SINE Alu 1 62 -249 335 242 204 15 chr5 170556271 170556403 -32529129 + MIR SINE MIR 102 258 -4 270 118 20 20 chr5 170556779 170556830 -32528702 + MIR SINE MIR 75 125 -83 459 254 280 0 chr5 170556861 170557054 -32528478 + MIR SINE MIR 15 261 -1 285 316 35 9 chr5 170557220 170557334 -32528198 - MIR3 SINE MIR -11 197 81 285 263 273 16 chr5 170557524 170557718 -32527814 - MIR SINE MIR 0 262 19 315 321 9 18 chr5 170558265 170558374 -32527158 + L2 LINE L2 3205 3312 -1 323 307 18 7 chr5 170558396 170558549 -32526983 + MIR SINE MIR 19 173 -66 360 279 71 12 chr5 170559223 170559385 -32526147 + MIR SINE MIR 22 192 -62 2585 79 0 0 chr5 170559490 170559795 -32525737 - AluSq SINE Alu -8 305 1 319 264 240 8 chr5 170559797 170559926 -32525606 + MIR SINE MIR 102 260 -2 518 216 65 26 chr5 170559938 170560091 -32525441 - MIR SINE MIR -56 206 48 355 296 92 14 chr5 170560283 170560425 -32525107 + MIR3 SINE MIR 8 160 -48 428 293 128 0 chr5 170560426 170560590 -32524942 - MER5A DNA MER1_type -1 188 4 510 279 52 39 chr5 170561017 170561250 -32524282 - L2 LINE L2 -1 3312 3077 209 271 0 0 chr5 170561444 170561492 -32524040 + CT-rich Low_complexity Low_complexity 1 48 0 403 326 0 28 chr5 170561628 170561772 -32523760 + L2 LINE L2 3169 3308 -5 2569 72 0 3 chr5 170561810 170562117 -32523415 + AluSq SINE Alu 1 306 -7 261 271 0 24 chr5 170562308 170562393 -32523139 - MIR SINE MIR -61 147 65 2351 96 3 3 chr5 170563138 170563440 -32522092 + AluSg SINE Alu 1 302 -8 234 383 85 0 chr5 170563628 170563722 -32521810 + MIR3 SINE MIR 77 178 -30 1558 177 50 39 chr5 170563777 170563822 -32521710 + MLT1A1 LTR MaLR 1 44 -321 2200 97 14 7 chr5 170563822 170564111 -32521421 - AluSg SINE Alu -19 291 1 1558 177 50 39 chr5 170564111 170564426 -32521106 + MLT1A1 LTR MaLR 44 365 0 2574 208 39 9 chr5 170564497 170565041 -32520491 + MER68 LTR ERV1 1 560 -2 643 180 16 0 chr5 170565112 170565240 -32520292 - MER33 DNA MER1_type 0 363 234 672 168 0 0 chr5 170565240 170565353 -32520179 - AluJ SINE Alu -5 307 195 1015 147 0 0 chr5 170565355 170565498 -32520034 - AluJ SINE Alu -169 143 1 517 214 42 18 chr5 170565498 170565666 -32519866 - MER33 DNA MER1_type -119 205 34 761 256 91 33 chr5 170565691 170565731 -32519801 + MIR SINE MIR 7 43 -219 1924 176 59 40 chr5 170565731 170566175 -32519357 + LTR47A LTR ERVL 1 452 0 761 256 91 33 chr5 170566175 170566376 -32519156 + MIR SINE MIR 43 262 0 264 257 68 0 chr5 170566382 170566456 -32519076 - MIR3 SINE MIR -18 190 112 200 267 48 116 chr5 170566898 170567044 -32518488 + L3 LINE CR1 1423 1558 -19 315 340 161 10 chr5 170567226 170567699 -32517833 - L2 LINE L2 0 3313 2750 353 260 115 0 chr5 170568156 170568252 -32517280 - MER96 DNA MER1_type? 0 175 69 388 295 108 8 chr5 170568494 170568623 -32516909 + MIR3 SINE MIR 20 161 -47 235 229 86 0 chr5 170568614 170568684 -32516848 - MIR SINE MIR -3 259 184 * 355 348 32 7 chr5 170568904 170569059 -32516473 + MER5A DNA MER1_type 24 182 -7 184 250 89 18 chr5 170569178 170569234 -32516298 - L2 LINE L2 -4 3309 3250 359 241 37 9 chr5 170569302 170569410 -32516122 - MIR3 SINE MIR -20 188 78 1773 129 29 13 chr5 170569447 170569756 -32515776 + MER39 LTR ERV1 394 707 0 327 258 151 25 chr5 170572508 170572667 -32512865 - MIR3 SINE MIR 0 208 30 213 286 0 0 chr5 170573103 170573159 -32512373 - MIR SINE MIR -144 118 63 545 274 20 14 chr5 170574123 170574269 -32511263 - MIR3 SINE MIR -41 167 21 238 309 0 0 chr5 170574544 170574612 -32510920 + L2 LINE L2 2573 2640 -674 254 288 197 8 chr5 170574869 170575001 -32510531 + MIR3 SINE MIR 32 188 -20 355 311 17 72 chr5 170575655 170575835 -32509697 - MIR3 SINE MIR -27 181 12 300 290 30 20 chr5 170576395 170576495 -32509037 + MIR SINE MIR 29 129 -79 224 300 133 25 chr5 170577389 170577509 -32508023 - MIR3 SINE MIR -63 145 13 248 91 182 0 chr5 170578811 170578855 -32506677 - MADE1 DNA Mariner -4 76 25 1002 171 47 0 chr5 170579016 170579186 -32506346 + FAM SINE Alu 1 49 0 461 318 0 0 chr5 170579341 170579467 -32506065 - MIR SINE MIR -67 141 16 551 297 69 10 chr5 170580524 170580726 -32504806 - MIR SINE MIR 0 262 49 489 295 67 50 chr5 170580860 170581202 -32504330 - L3 LINE CR1 -48 1529 1182 * 556 309 36 58 chr5 170581188 170581771 -32503761 + L2 LINE L2 2659 3232 -40 582 251 117 38 chr5 170582101 170582340 -32503192 - MIR SINE MIR 0 262 5 2377 105 0 3 chr5 170582531 170582844 -32502688 + AluSq SINE Alu 1 312 -1 385 127 25 13 chr5 170582852 170582931 -32502601 + GA-rich Low_complexity Low_complexity 2 81 0 204 282 42 0 chr5 170584502 170584573 -32500959 - MIR SINE MIR -1 261 188 1131 236 112 22 chr5 170585906 170586309 -32499223 - MER113 DNA MER1_type? -74 447 9 655 268 13 54 chr5 170586711 170586935 -32498597 - MIR SINE MIR 0 262 48 201 290 136 70 chr5 170588300 170588586 -32496946 - L2 LINE L2 -20 3252 2948 24 0 0 0 chr5 170589097 170589121 -32496411 + AT_rich Low_complexity Low_complexity 1 24 0 512 212 146 0 chr5 170589621 170589772 -32495760 - MIR3 SINE MIR -20 188 16 361 235 29 39 chr5 170589846 170589948 -32495584 + L1ME4a LINE L1 5931 6031 -90 2280 120 0 0 chr5 170590759 170591058 -32494474 - AluSx SINE Alu -13 299 1 1676 186 14 7 chr5 170591063 170591354 -32494178 - AluJo SINE Alu -19 293 1 2069 136 20 0 chr5 170591628 170591922 -32493610 - AluSq SINE Alu -13 300 1 259 305 107 15 chr5 170592034 170592165 -32493367 - MIR3 SINE MIR -51 157 15 445 328 78 8 chr5 170592921 170593165 -32492367 + L1ME LINE L1 5559 5819 -302 1999 179 0 3 chr5 170593181 170593493 -32492039 + AluJb SINE Alu 2 312 0 1741 144 89 4 chr5 170593760 170594031 -32491501 - AluJo SINE Alu -18 294 1 215 244 0 0 chr5 170594076 170594117 -32491415 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 2050 117 14 7 chr5 170594788 170595079 -32490453 - AluSx SINE Alu -19 293 1 4181 212 47 50 chr5 170596078 170596359 -32489173 + L1MC4a LINE L1 6565 6845 -963 180 77 0 0 chr5 170596359 170596385 -32489147 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4181 212 47 50 chr5 170596385 170597383 -32488149 + L1MC4a LINE L1 6845 7808 0 601 252 39 13 chr5 170598022 170598177 -32487355 - MIR SINE MIR -48 214 56 180 295 38 57 chr5 170598615 170598720 -32486812 + MIR SINE MIR 99 201 -61 540 319 234 3 chr5 170599140 170599504 -32486028 + L3 LINE CR1 1061 1508 -69 1316 250 55 12 chr5 170599897 170600297 -32485235 - MER113 DNA MER1_type? -67 454 38 494 130 0 0 chr5 170600322 170600399 -32485133 - AluJ/FRAM SINE Alu -11 301 225 1832 147 44 0 chr5 170601242 170601546 -32483986 - AluSq SINE Alu 0 316 1 1712 151 0 71 chr5 170601767 170602091 -32483441 - AluJo SINE Alu -3 309 9 990 157 10 61 chr5 170602660 170602857 -32482675 - AluJo SINE Alu -125 187 1 191 161 0 0 chr5 170602909 170602940 -32482592 - MIR SINE MIR -97 111 81 373 282 18 0 chr5 170603351 170603461 -32482071 + MIR3 SINE MIR 81 192 -16 218 352 28 19 chr5 170603466 170603574 -32481958 + MER5A DNA MER1_type 1 109 -80 300 298 60 63 chr5 170604369 170604751 -32480781 + L2 LINE L2 2890 3270 -43 2438 110 0 0 chr5 170604982 170605290 -32480242 - AluSx SINE Alu -4 308 1 240 355 41 8 chr5 170605547 170605668 -32479864 - MIR SINE MIR -15 247 123 306 358 89 0 chr5 170605879 170606002 -32479530 + MLT1I LTR MaLR 71 204 -205 1869 160 13 26 chr5 170606279 170606591 -32478941 + AluJb SINE Alu 1 308 -4 367 242 134 59 chr5 170606998 170607184 -32478348 - L2 LINE L2 -1 3312 3113 184 236 150 63 chr5 170607648 170607775 -32477757 + MIR3 SINE MIR 6 143 -65 478 321 83 5 chr5 170607889 170608082 -32477450 - MIR SINE MIR -28 234 27 440 257 107 14 chr5 170608165 170608305 -32477227 + MIR SINE MIR 11 163 -99 201 226 49 98 chr5 170609101 170609203 -32476329 + MIR SINE MIR 95 191 -71 1977 123 42 6 chr5 170609243 170609324 -32476208 - MER2 DNA MER2_type 0 344 267 2102 110 24 0 chr5 170609324 170609616 -32475916 + AluSg SINE Alu 1 299 -11 1977 123 42 6 chr5 170609616 170609866 -32475666 - MER2 DNA MER2_type -77 267 1 1778 107 0 0 chr5 170609876 170610101 -32475431 - AluSx SINE Alu -87 225 1 382 278 185 7 chr5 170610590 170610741 -32474791 - MIR3 SINE MIR -8 200 23 480 18 0 0 chr5 170611653 170611710 -32473822 + (GA)n Simple_repeat Simple_repeat 1 57 0 351 0 0 0 chr5 170611709 170611748 -32473784 + (TG)n Simple_repeat Simple_repeat 1 39 0 * 220 296 68 30 chr5 170612556 170612688 -32472844 - MIR SINE MIR -22 240 104 1887 155 20 14 chr5 170613361 170613658 -32471874 - AluJo SINE Alu -13 299 1 274 184 24 53 chr5 170613806 170613896 -32471636 - MIR SINE MIR -61 147 77 339 280 20 20 chr5 170614436 170614574 -32470958 - MIR SINE MIR -52 156 25 205 184 41 41 chr5 170615026 170615075 -32470457 + MIR SINE MIR 95 143 -65 237 276 0 0 chr5 170615097 170615155 -32470377 + MER117 DNA MER1_type 15 72 -125 194 129 0 0 chr5 170615155 170615186 -32470346 + L2 LINE L2 3267 3297 -16 570 276 99 10 chr5 170617076 170617268 -32468264 - L3 LINE CR1 -452 1125 917 278 380 18 0 chr5 170617340 170617453 -32468079 + L2 LINE L2 3155 3269 -3 181 261 22 0 chr5 170617460 170617506 -32468026 + MIR SINE MIR 72 118 -90 243 224 224 56 chr5 170617535 170617678 -32467854 + Charlie7 DNA MER1_type 2 168 -2444 675 277 264 6 chr5 170617885 170618199 -32467333 - L2 LINE L2 0 3313 2919 442 318 56 5 chr5 170618471 170618669 -32466863 - MIR SINE MIR -7 255 48 215 167 21 21 chr5 170619112 170619160 -32466372 + MIR SINE MIR 207 254 -8 205 362 133 0 chr5 170619506 170619611 -32465921 + L2 LINE L2 3134 3252 -20 182 252 101 59 chr5 170620491 170620610 -32464922 - MIR3 SINE MIR -42 166 43 231 344 172 8 chr5 170621239 170621367 -32464165 - MIR SINE MIR -1 261 113 478 310 26 13 chr5 170621926 170622081 -32463451 + MIR SINE MIR 60 216 -46 199 296 0 0 chr5 170622184 170622228 -32463304 + L2 LINE L2 3209 3252 -20 1826 125 9 38 chr5 170622689 170623009 -32462523 + L1MC1 LINE L1 6022 6332 -1 280 229 16 0 chr5 170623315 170623376 -32462156 + MIR3 SINE MIR 137 198 -10 413 316 23 8 chr5 170623941 170624074 -32461458 - MIR SINE MIR -126 136 2 210 328 15 0 chr5 170624235 170624302 -32461230 - L3b LINE CR1 -10 1573 1506 320 338 49 14 chr5 170624593 170624735 -32460797 - L3 LINE CR1 -483 1094 948 2455 92 0 0 chr5 170624820 170625124 -32460408 + AluSx SINE Alu 1 304 -8 605 286 102 29 chr5 170625172 170625515 -32460017 + L1MC4a LINE L1 5615 5975 -146 1554 168 17 34 chr5 170625515 170625812 -32459720 + AluJo SINE Alu 21 312 0 605 286 102 29 chr5 170625812 170625847 -32459685 + L1MC4a LINE L1 5975 6006 -115 418 253 30 0 chr5 170626128 170626227 -32459305 + AluJo SINE Alu 113 214 -88 361 283 36 7 chr5 170626548 170626686 -32458846 + L1ME3A LINE L1 5717 5858 -312 1692 161 18 11 chr5 170626686 170626960 -32458572 - AluJb SINE Alu -36 276 1 1647 141 69 0 chr5 170627230 170627534 -32457998 - L1PA16 LINE L1 0 6166 5842 260 358 21 42 chr5 170628321 170628514 -32457018 - MIR3 SINE MIR -1 207 19 1105 184 173 32 chr5 170628878 170629225 -32456307 - MSTD LTR MaLR 0 396 1 247 349 48 7 chr5 170629316 170629462 -32456070 - MIR SINE MIR 0 262 111 375 168 25 109 chr5 170629554 170629673 -32455859 + MER5A DNA MER1_type 78 186 -3 181 299 60 0 chr5 170629830 170629897 -32455635 + MIR SINE MIR 42 112 -96 217 175 0 0 chr5 170630168 170630208 -32455324 + MIR SINE MIR 104 143 -65 579 301 42 106 chr5 170630220 170630739 -32454793 - L2 LINE L2 0 3313 2828 395 159 191 8 chr5 170631149 170631225 -32454307 + MIR SINE MIR 90 151 -111 2305 82 14 7 chr5 170631225 170631519 -32454013 + AluSx SINE Alu 1 296 -16 395 159 191 8 chr5 170631519 170631568 -32453964 + MIR SINE MIR 151 238 -24 696 218 169 9 chr5 170632128 170632367 -32453165 + MIR SINE MIR 5 262 0 27 29 0 0 chr5 170632987 170633021 -32452511 + GC_rich Low_complexity Low_complexity 1 34 0 217 327 72 7 chr5 170633213 170633366 -32452166 - MIR3 SINE MIR -16 192 30 254 321 186 7 chr5 170633523 170633663 -32451869 - MIR SINE MIR -71 191 27 273 222 12 25 chr5 170634599 170634680 -32450852 - LTR37B LTR ERV1 -388 80 1 356 244 101 60 chr5 170634783 170634951 -32450581 - MIR3 SINE MIR -32 176 2 483 275 164 10 chr5 170635004 170635211 -32450321 + MIR SINE MIR 17 255 -7 243 61 0 0 chr5 170635523 170635556 -32449976 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 600 273 128 13 chr5 170635742 170635969 -32449563 - MIR SINE MIR -2 260 8 394 275 20 80 chr5 170635993 170636044 -32449488 - MIR3 SINE MIR -4 204 151 2485 80 3 6 chr5 170636044 170636355 -32449177 + AluSq SINE Alu 1 310 -3 394 275 20 80 chr5 170636355 170636503 -32449029 - MIR3 SINE MIR -56 152 17 242 325 39 0 chr5 170637098 170637175 -32448357 + MIR SINE MIR 111 190 -72 262 254 0 0 chr5 170638039 170638098 -32447434 - L2 LINE L2 -59 3213 3155 360 266 7 14 chr5 170638462 170638605 -32446927 + (CA)n Simple_repeat Simple_repeat 2 143 0 231 308 51 0 chr5 170639595 170639673 -32445859 + MIR SINE MIR 64 145 -63 1893 136 26 19 chr5 170639724 170640033 -32445499 + AluJb SINE Alu 1 311 -1 247 288 0 0 chr5 170640212 170640271 -32445261 - L2 LINE L2 -59 3213 3155 837 182 39 28 chr5 170640280 170640461 -32445071 - MER3 DNA MER1_type -26 183 1 363 272 102 27 chr5 170640546 170640693 -32444839 - L2 LINE L2 -181 3091 2934 327 212 246 8 chr5 170640958 170641076 -32444456 - MIR3 SINE MIR -43 165 20 495 205 71 0 chr5 170641085 170641197 -32444335 - MER3 DNA MER1_type -79 130 11 453 273 149 19 chr5 170641652 170641813 -32443719 + MIR3 SINE MIR 13 194 -14 330 296 169 16 chr5 170641895 170642084 -32443448 - MIR SINE MIR -2 260 43 205 372 0 33 chr5 170642402 170642523 -32443009 + MER5A DNA MER1_type 67 183 -6 373 302 85 21 chr5 170642746 170642935 -32442597 - L3 LINE CR1 -7 1570 1370 242 301 72 85 chr5 170642985 170643069 -32442463 + L2 LINE L2 2827 2911 -361 2366 113 0 3 chr5 170643069 170643379 -32442153 - AluSg SINE Alu -1 309 1 242 301 72 85 chr5 170643379 170643530 -32442002 + L2 LINE L2 2911 3059 -213 1070 221 0 0 chr5 170643662 170643861 -32441671 + MER20 DNA MER1_type 2 200 -19 294 314 114 0 chr5 170643892 170643997 -32441535 + L2 LINE L2 3151 3267 -5 2579 71 0 3 chr5 170644180 170644490 -32441042 + AluY SINE Alu 1 309 -2 223 317 41 41 chr5 170644793 170644916 -32440616 + MIR SINE MIR 27 149 -113 224 179 0 0 chr5 170645034 170645073 -32440459 - MER5B DNA MER1_type 0 178 140 709 194 36 18 chr5 170645073 170645238 -32440294 + MER5B DNA MER1_type 11 178 0 506 313 12 6 chr5 170645698 170645861 -32439671 - MIR3 SINE MIR -11 197 34 181 262 48 24 chr5 170646246 170646330 -32439202 - MIR SINE MIR -19 243 158 243 0 0 0 chr5 170647130 170647157 -32438375 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 234 51 95 chr5 170648103 170648240 -32437292 + L2 LINE L2 2917 3047 -225 2091 124 9 22 chr5 170648302 170648617 -32436915 - AluSq SINE Alu -2 311 1 236 239 163 11 chr5 170648816 170648908 -32436624 - MIR SINE MIR -144 118 13 527 246 82 12 chr5 170649135 170649306 -32436226 + MIR3 SINE MIR 16 198 -10 229 304 29 0 chr5 170649308 170649377 -32436155 + MIR SINE MIR 77 147 -61 1519 160 63 24 chr5 170649499 170649786 -32435746 - AluJo SINE Alu -14 298 1 320 281 67 29 chr5 170650095 170650253 -32435279 + MIR3 SINE MIR 19 185 -23 216 319 0 0 chr5 170650464 170650536 -32434996 + L2 LINE L2 3201 3272 0 232 296 37 74 chr5 170651213 170651348 -32434184 - MIR SINE MIR -16 246 117 337 279 41 25 chr5 170651544 170651666 -32433866 - MIR3 SINE MIR -7 201 78 2450 97 3 0 chr5 170651734 170652044 -32433488 + AluSp SINE Alu 2 312 -1 481 292 36 12 chr5 170652670 170652838 -32432694 - MIR3 SINE MIR -14 194 23 2201 134 0 0 chr5 170654304 170654609 -32430923 + AluSx SINE Alu 1 305 -7 1023 224 48 22 chr5 170654609 170654869 -32430663 + L1MB7 LINE L1 5885 6154 -30 2337 119 0 0 chr5 170654869 170655179 -32430353 - AluSx SINE Alu -2 310 1 1645 217 106 0 chr5 170655778 170656193 -32429339 + MLT1C LTR MaLR 4 462 -5 699 288 46 5 chr5 170656270 170656489 -32429043 + MIR SINE MIR 23 250 -12 251 188 0 0 chr5 170656681 170656729 -32428803 + L2 LINE L2 3138 3185 -87 815 212 57 57 chr5 170656759 170656971 -32428561 - MER20 DNA MER1_type -5 214 3 271 281 24 12 chr5 170657488 170657570 -32427962 - MER5A DNA MER1_type -8 181 99 606 175 0 71 chr5 170657586 170657712 -32427820 + MER5A DNA MER1_type 1 117 -72 328 185 0 46 chr5 170657712 170657757 -32427775 - MER81 DNA DNA -2 112 69 536 101 13 0 chr5 170657757 170657836 -32427696 + MADE1 DNA Mariner 1 80 0 328 185 0 46 chr5 170657836 170657855 -32427677 - MER81 DNA DNA -45 69 51 224 119 48 0 chr5 170658586 170658628 -32426904 + L2 LINE L2 3024 3067 -205 275 224 267 26 chr5 170658892 170659008 -32426524 + MIR SINE MIR 17 160 -102 936 217 16 30 chr5 170659075 170659324 -32426208 - MIR SINE MIR 0 262 20 249 228 51 51 chr5 170659393 170659472 -32426060 + HsTC2 DNA Tc2 4 82 -1816 242 171 35 41 chr5 170659757 170659927 -32425605 + (TG)n Simple_repeat Simple_repeat 1 169 0 211 97 42 56 chr5 170659985 170660057 -32425475 + (TG)n Simple_repeat Simple_repeat 2 72 0 281 284 26 26 chr5 170660702 170660818 -32424714 + MIR SINE MIR 22 137 -71 668 298 80 8 chr5 170660835 170661073 -32424459 - MIR SINE MIR -1 261 7 437 146 85 0 chr5 170661319 170661401 -32424131 - MER117 DNA MER1_type -107 90 2 219 215 154 0 chr5 170661452 170661517 -32424015 - MIR SINE MIR -186 76 2 324 179 234 28 chr5 170662206 170662351 -32423181 - MER113 DNA MER1_type? -345 176 2 203 237 76 93 chr5 170662950 170663068 -32422464 - MIR3 SINE MIR -14 194 79 481 258 84 56 chr5 170663344 170663473 -32422059 + L1MC4a LINE L1 5577 5701 -2107 1657 141 57 0 chr5 170663473 170663721 -32421811 - AluJb SINE Alu -14 298 37 1792 100 32 32 chr5 170663721 170663971 -32421561 - AluSx SINE Alu -61 251 1 481 258 84 56 chr5 170663971 170664196 -32421336 + L1MC4a LINE L1 5700 5942 -1866 1589 186 53 0 chr5 170664433 170664718 -32420814 + AluJb SINE Alu 2 301 -11 1547 150 43 28 chr5 170664724 170665001 -32420531 + L1MB3 LINE L1 5852 6136 -47 2288 109 3 3 chr5 170665001 170665305 -32420227 + AluSq SINE Alu 1 304 -9 1547 150 43 28 chr5 170665305 170665354 -32420178 + L1MB3 LINE L1 6136 6183 0 2464 182 38 33 chr5 170665586 170666196 -32419336 + L1MB8 LINE L1 5561 6173 -5 2473 96 0 6 chr5 170666212 170666526 -32419006 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 170666582 170666606 -32418926 + AT_rich Low_complexity Low_complexity 1 24 0 371 288 98 31 chr5 170666949 170667196 -32418336 + L1ME4a LINE L1 5757 6068 -53 180 231 26 0 chr5 170667521 170667560 -32417972 + L2 LINE L2 3274 3313 0 365 220 190 0 chr5 170668458 170668558 -32416974 - L2 LINE L2 -4 3309 3191 484 217 26 0 chr5 170668684 170668799 -32416733 + MIR3 SINE MIR 70 187 -21 414 219 68 55 chr5 170669144 170669290 -32416242 + MIR SINE MIR 104 251 -11 222 375 62 0 chr5 170669925 170670101 -32415431 + L2 LINE L2 2553 2739 -575 2131 129 0 16 chr5 170670144 170670311 -32415221 - AluJb SINE Alu -14 298 137 2287 122 3 0 chr5 170670311 170670615 -32414917 - AluSx SINE Alu -7 305 1 2131 129 0 16 chr5 170670615 170670750 -32414782 - AluJb SINE Alu -175 137 1 611 257 29 0 chr5 170670785 170670925 -32414607 - MER45A DNA AcHobo -33 145 2 380 245 49 65 chr5 170671556 170671740 -32413792 + L1ME4a LINE L1 5940 6120 -1 1827 153 73 0 chr5 170671767 170672042 -32413490 - AluJb SINE Alu -17 295 1 350 253 33 11 chr5 170672224 170672315 -32413217 - L2 LINE L2 0 3313 3221 2325 94 0 7 chr5 170672319 170672618 -32412914 + AluSx SINE Alu 3 299 -13 610 284 87 9 chr5 170673063 170673292 -32412240 + MIR SINE MIR 14 260 -2 247 302 57 0 chr5 170673456 170673562 -32411970 - MIR SINE MIR -65 143 32 893 264 138 7 chr5 170673623 170673919 -32411613 + MLT1K LTR MaLR 216 550 -38 564 273 49 16 chr5 170675111 170675294 -32410238 + MIR3 SINE MIR 6 194 -14 380 289 0 0 chr5 170675781 170675878 -32409654 - MIR3 SINE MIR -53 155 59 375 113 0 0 chr5 170676419 170676481 -32409051 + (GA)n Simple_repeat Simple_repeat 1 62 0 347 225 58 42 chr5 170676835 170676955 -32408577 + L2 LINE L2 3192 3313 0 1800 164 52 0 chr5 170676957 170677243 -32408289 + AluJb SINE Alu 1 301 -11 748 251 69 69 chr5 170677258 170677605 -32407927 + MER113 DNA MER1_type? 142 488 -33 402 241 15 51 chr5 170677652 170677789 -32407743 - MIR3 SINE MIR -11 197 66 380 128 13 0 chr5 170678414 170678492 -32407040 + (CA)n Simple_repeat Simple_repeat 2 80 0 2501 81 0 3 chr5 170678593 170678900 -32406632 - AluSq SINE Alu -7 306 1 192 209 90 15 chr5 170679060 170679127 -32406405 + L2 LINE L2 3200 3271 -1 758 220 60 40 chr5 170680254 170680454 -32405078 + MER63A DNA MER1_type 7 210 0 434 256 7 29 chr5 170680586 170680723 -32404809 - MER103 DNA DNA -31 135 2 1832 147 44 0 chr5 170681580 170681884 -32403648 - AluSq SINE Alu 0 316 1 1762 142 0 71 chr5 170682109 170682433 -32403099 - AluJo SINE Alu -3 309 9 296 140 0 18 chr5 170683774 170683831 -32401701 - MIR SINE MIR -62 146 91 184 222 0 0 chr5 170683845 170683881 -32401651 + MIR SINE MIR 46 81 -181 379 258 132 0 chr5 170683956 170684084 -32401448 + MIR SINE MIR 115 261 -1 385 53 0 35 chr5 170684760 170684817 -32400715 + MADE1 DNA Mariner 1 55 -25 381 68 34 0 chr5 170684917 170684976 -32400556 + MADE1 DNA Mariner 20 80 0 286 313 63 93 chr5 170685262 170685345 -32400187 + L2 LINE L2 2864 2948 -324 1577 155 18 105 chr5 170685345 170685725 -32399807 - MER7A DNA MER2_type 0 346 2 286 313 63 93 chr5 170685725 170686037 -32399495 + L2 LINE L2 2948 3247 -25 222 289 11 67 chr5 170686118 170686208 -32399324 + L2 LINE L2 3229 3313 0 456 266 18 92 chr5 170687674 170687903 -32397629 - Charlie8 DNA MER1_type -2203 214 3 295 328 112 39 chr5 170688575 170689133 -32396399 + L2 LINE L2 2592 3312 -1 332 295 45 28 chr5 170689493 170689514 -32396018 + MIR SINE MIR 34 53 -200 2422 130 44 2 chr5 170689514 170689923 -32395609 + MSTA LTR MaLR 3 428 0 332 295 45 28 chr5 170689923 170690081 -32395451 + MIR SINE MIR 53 210 -43 273 244 244 13 chr5 170690872 170691028 -32394504 - MIR SINE MIR -2 260 69 263 333 32 32 chr5 170691071 170691197 -32394335 + L2 LINE L2 3161 3286 -27 426 292 76 7 chr5 170691678 170691822 -32393710 - MIR3 SINE MIR -38 170 17 252 0 0 0 chr5 170692600 170692628 -32392904 + (TA)n Simple_repeat Simple_repeat 2 29 0 692 192 0 0 chr5 170692628 170692748 -32392784 - FLAM_C SINE Alu -22 121 2 306 353 37 7 chr5 170693291 170693427 -32392105 - L2 LINE L2 -17 3255 3116 1996 150 7 13 chr5 170694222 170694528 -32391004 + AluSx SINE Alu 3 306 -6 183 197 70 56 chr5 170694663 170694734 -32390798 + L2 LINE L2 3201 3272 0 282 268 47 9 chr5 170695103 170695245 -32390287 - MIR SINE MIR -92 116 19 466 246 9 18 chr5 170695697 170695811 -32389721 + L2 LINE L2 3160 3272 0 256 240 70 120 chr5 170695836 170696036 -32389496 - L2 LINE L2 -216 3056 2867 315 192 14 14 chr5 170696284 170696357 -32389175 - MER116 DNA Mariner -1 79 7 201 227 45 0 chr5 170697624 170697668 -32387864 + (CATG)n Simple_repeat Simple_repeat 1 46 0 1583 189 73 0 chr5 170698820 170699095 -32386437 - AluJb SINE Alu -17 295 1 900 302 54 23 chr5 170699353 170699757 -32385775 + MLT1K LTR MaLR 98 582 -6 219 290 169 24 chr5 170700293 170700417 -32385115 - MIR SINE MIR -112 150 9 246 367 167 14 chr5 170700549 170700764 -32384768 - L2 LINE L2 -19 3294 3047 183 260 41 14 chr5 170700805 170700878 -32384654 - L2 LINE L2 -369 2903 2829 2016 148 3 19 chr5 170700915 170701225 -32384307 + AluJb SINE Alu 1 305 -7 2311 91 3 0 chr5 170701482 170701769 -32383763 - AluSg SINE Alu -22 288 1 1980 135 10 6 chr5 170701822 170702133 -32383399 + AluSx SINE Alu 1 312 0 209 243 122 14 chr5 170702137 170702211 -32383321 + L3 LINE CR1 1286 1367 -210 180 0 0 0 chr5 170702594 170702614 -32382918 + (CAGCT)n Simple_repeat Simple_repeat 1 20 0 277 297 68 42 chr5 170703291 170703409 -32382123 - MIR3 SINE MIR -31 177 94 332 203 111 10 chr5 170703516 170703619 -32381913 + MIR SINE MIR 36 145 -63 524 241 105 0 chr5 170704142 170704304 -32381228 + MIR SINE MIR 84 262 0 588 289 100 2 chr5 170704331 170704568 -32380964 + MIR SINE MIR 3 262 0 570 239 28 39 chr5 170705226 170705406 -32380126 - MER5B DNA MER1_type 0 178 1 869 221 171 19 chr5 170705591 170705907 -32379625 + LTR37A LTR ERV1 53 416 -10 186 318 59 0 chr5 170706054 170706139 -32379393 - MIR SINE MIR -60 148 59 333 324 0 9 chr5 170706145 170706250 -32379282 - L2 LINE L2 -9 3304 3201 333 0 0 0 chr5 170706283 170706320 -32379212 + (TA)n Simple_repeat Simple_repeat 1 37 0 342 267 10 10 chr5 170706403 170706504 -32379028 - Charlie7 DNA MER1_type -2511 101 1 808 244 23 41 chr5 170706831 170707097 -32378435 + MIR SINE MIR 2 262 0 212 267 99 46 chr5 170707761 170707892 -32377640 - MIR3 SINE MIR -53 155 18 230 269 97 11 chr5 170708868 170708961 -32376571 - MIR SINE MIR -74 134 34 271 310 142 7 chr5 170709881 170710036 -32375496 - MIR3 SINE MIR -3 205 30 284 279 114 7 chr5 170710109 170710249 -32375283 - MIR SINE MIR -52 210 56 811 263 83 0 chr5 170710419 170710659 -32374873 - L2 LINE L2 -341 2973 2714 4313 167 5 51 chr5 170710665 170710958 -32374574 - L1MB5 LINE L1 -12 6162 5857 2275 96 33 0 chr5 170710958 170711259 -32374273 - AluSp SINE Alu -2 311 1 4313 167 5 51 chr5 170711259 170711317 -32374215 - L1MB5 LINE L1 -317 5857 5798 2120 123 7 13 chr5 170711317 170711618 -32373914 - AluSq SINE Alu -14 299 1 4313 167 5 51 chr5 170711618 170711991 -32373541 - L1MB5 LINE L1 -376 5798 5487 1876 158 27 3 chr5 170711991 170712288 -32373244 + AluJb SINE Alu 1 304 -8 4313 167 5 51 chr5 170712288 170712509 -32373023 - L1MB5 LINE L1 -687 5487 5258 2167 120 0 10 chr5 170712513 170712812 -32372720 - AluSx SINE Alu -16 296 1 265 196 49 59 chr5 170712814 170712916 -32372616 - L2 LINE L2 -601 2713 2613 349 125 62 0 chr5 170713016 170713112 -32372420 - L1M LINE L1 -815 5359 5258 2158 121 0 10 chr5 170713116 170713414 -32372118 - AluSx SINE Alu -17 295 1 2405 225 184 42 chr5 170713416 170713877 -32371655 - L2 LINE L2 -601 2713 2319 2739 123 9 26 chr5 170713877 170714213 -32371319 + MER83 LTR ERV1 1 328 -120 2269 116 13 0 chr5 170714213 170714515 -32371017 - AluSg SINE Alu -3 307 2 2739 123 9 26 chr5 170714515 170714632 -32370900 + MER83 LTR ERV1 328 446 -2 2405 225 184 42 chr5 170714632 170714679 -32370853 - L2 LINE L2 -995 2319 2280 1997 112 49 3 chr5 170714679 170714964 -32370568 + AluSx SINE Alu 1 298 -14 2405 225 184 42 chr5 170714964 170715480 -32370052 - L2 LINE L2 -1034 2280 1542 276 282 24 0 chr5 170715644 170715729 -32369803 + L1MC4a LINE L1 5606 5692 -429 1692 150 23 49 chr5 170715734 170716041 -32369491 - AluJb SINE Alu -13 299 1 1320 135 10 10 chr5 170716041 170716249 -32369283 - AluJb SINE Alu -3 309 102 3901 95 23 16 chr5 170716274 170716640 -32368892 - L1PB1 LINE L1 -1 6150 5777 2278 93 7 7 chr5 170716640 170716940 -32368592 - AluSx SINE Alu -12 300 1 3901 95 23 16 chr5 170716940 170717185 -32368347 - L1PB1 LINE L1 -374 5777 5535 317 305 81 41 chr5 170717986 170718183 -32367349 + MIR SINE MIR 47 251 -11 196 129 0 0 chr5 170718497 170718528 -32367004 + L2 LINE L2 2935 2965 -307 1717 181 61 0 chr5 170718638 170718931 -32366601 - AluJb SINE Alu -1 311 1 206 81 27 0 chr5 170718944 170718981 -32366551 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 876 127 0 0 chr5 170718982 170719100 -32366432 - AluJ SINE Alu -193 119 2 21 0 0 0 chr5 170719183 170719204 -32366328 + AT_rich Low_complexity Low_complexity 1 21 0 467 296 14 56 chr5 170719549 170719762 -32365770 - L2 LINE L2 0 3313 3110 348 272 83 39 chr5 170720046 170720226 -32365306 - MIR3 SINE MIR -15 193 6 366 256 41 8 chr5 170720512 170720633 -32364899 + L1MC4a LINE L1 5701 5825 -1983 1133 193 8 53 chr5 170720634 170720878 -32364654 + AluJo SINE Alu 65 297 -15 23 33 0 0 chr5 170720949 170720979 -32364553 + AT_rich Low_complexity Low_complexity 1 30 0 1479 222 46 0 chr5 170721242 170721548 -32363984 - MER58B DNA MER1_type 0 341 22 263 150 0 0 chr5 170722107 170722147 -32363385 - AluJ/FRAM SINE Alu -43 259 220 432 282 70 19 chr5 170722166 170722322 -32363210 + MIR3 SINE MIR 24 187 -21 405 294 110 22 chr5 170722378 170722606 -32362926 + MIR SINE MIR 15 262 0 1260 141 0 0 chr5 170722628 170722805 -32362727 + FRAM SINE Alu 1 175 -1 777 168 0 29 chr5 170723642 170723779 -32361753 + AluJo/FLAM SINE Alu 1 133 -169 2213 134 0 0 chr5 170723779 170724085 -32361447 + AluSq SINE Alu 1 306 -7 190 316 20 53 chr5 170724111 170724142 -32361390 - L2 LINE L2 -661 2653 2623 203 152 0 0 chr5 170724142 170724175 -32361357 - L3 LINE CR1 -498 1079 1047 190 316 20 53 chr5 170724175 170724263 -32361269 - L2 LINE L2 -691 2623 2507 328 323 85 25 chr5 170724503 170724704 -32360828 + MIR SINE MIR 26 238 -24 272 339 31 24 chr5 170724731 170724858 -32360674 + L3 LINE CR1 1426 1553 -24 626 271 91 53 chr5 170724865 170725059 -32360473 + L1ME4a LINE L1 5623 5808 -313 2354 123 0 0 chr5 170725059 170725361 -32360171 + AluSx SINE Alu 1 302 -10 2139 108 38 0 chr5 170725370 170725657 -32359875 + AluSx SINE Alu 1 298 -14 626 271 91 53 chr5 170725657 170725883 -32359649 + L1ME4a LINE L1 5815 6069 -52 2435 93 0 7 chr5 170725885 170726195 -32359337 - AluSg SINE Alu -2 308 1 274 231 88 33 chr5 170727743 170727834 -32357698 + MIR3 SINE MIR 109 204 -4 2022 168 0 0 chr5 170727973 170728271 -32357261 - AluJb SINE Alu -14 298 1 302 299 130 7 chr5 170728277 170728431 -32357101 - MER5B DNA MER1_type -1 177 5 340 248 156 9 chr5 170728301 170728410 -32357122 + MER5A DNA MER1_type 40 164 -25 459 248 67 47 chr5 170728437 170728586 -32356946 - MER5B DNA MER1_type 0 178 27 814 249 36 0 chr5 170728592 170728785 -32356747 - MER3 DNA MER1_type -9 200 1 2190 121 7 0 chr5 170728880 170729178 -32356354 + AluSx SINE Alu 1 300 -12 195 282 282 51 chr5 170729236 170729353 -32356179 - MIR SINE MIR -67 195 52 2400 117 0 0 chr5 170729387 170729695 -32355837 - AluSg SINE Alu -2 308 1 324 296 70 21 chr5 170729726 170729868 -32355664 - MIR3 SINE MIR -30 178 30 431 257 28 22 chr5 170730557 170730736 -32354796 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 516 230 0 9 chr5 170731065 170731178 -32354354 + MIR SINE MIR 31 142 -66 334 335 150 8 chr5 170731221 170731487 -32354045 - L2 LINE L2 -1 3312 3009 181 300 0 0 chr5 170732362 170732412 -32353120 - MIR SINE MIR -58 150 101 266 222 56 28 chr5 170732814 170732886 -32352646 + MIR SINE MIR 41 114 -94 2434 88 0 7 chr5 170733792 170734097 -32351435 - AluY SINE Alu -6 305 3 413 240 10 0 chr5 170734176 170734272 -32351260 - MER103 DNA DNA -7 159 63 180 220 32 151 chr5 170735496 170735682 -32349850 - MIR3 SINE MIR -3 205 42 590 287 32 42 chr5 170736355 170736596 -32348936 + MIR SINE MIR 10 243 -19 257 328 161 6 chr5 170738240 170738414 -32347118 - MIR SINE MIR -49 213 13 211 211 0 0 chr5 170738424 170738462 -32347070 + MIR SINE MIR 109 146 -116 394 146 45 0 chr5 170739038 170739130 -32346402 + GA-rich Low_complexity Low_complexity 1 96 0 500 343 42 39 chr5 170739456 170739742 -32345790 + L2 LINE L2 2812 3098 -174 293 289 30 56 chr5 170740524 170740723 -32344809 + MIR SINE MIR 17 212 -37 2060 120 13 0 chr5 170740969 170741269 -32344263 + AluSx SINE Alu 1 304 -8 45 55 0 0 chr5 170741301 170741374 -32344158 + AT_rich Low_complexity Low_complexity 1 73 0 2878 191 47 129 chr5 170741610 170743020 -32342512 + L1ME1 LINE L1 716 1970 -4245 1939 125 0 16 chr5 170743030 170743334 -32342198 + AluSx SINE Alu 1 299 -13 3734 226 67 42 chr5 170743496 170743586 -32341946 + L1ME1 LINE L1 2235 2321 -3894 693 94 19 19 chr5 170743586 170743692 -32341840 + L1PA16 LINE L1 6061 6166 0 3734 226 67 42 chr5 170743692 170744390 -32341142 + L1ME1 LINE L1 2321 3000 -3215 1641 171 13 13 chr5 170744390 170744699 -32340833 + AluJo SINE Alu 4 312 0 3734 226 67 42 chr5 170744699 170745434 -32340098 + L1ME1 LINE L1 3000 3902 -2313 1255 219 68 12 chr5 170745434 170745759 -32339773 - MER2 DNA MER2_type 0 344 2 3734 226 67 42 chr5 170745759 170745813 -32339719 + L1ME1 LINE L1 3902 3953 -2262 1333 195 29 36 chr5 170745816 170746123 -32339409 + AluJb SINE Alu 1 305 -7 215 125 25 0 chr5 170746146 170746186 -32339346 + GA-rich Low_complexity Low_complexity 2 42 0 2871 219 93 24 chr5 170746198 170747202 -32338330 + L1ME1 LINE L1 5064 6155 -80 2286 84 0 0 chr5 170747202 170747498 -32338034 + AluSg1 SINE Alu 6 301 -8 2871 219 93 24 chr5 170747498 170747585 -32337947 + L1ME1 LINE L1 6155 6235 0 209 250 0 0 chr5 170747693 170747741 -32337791 - L2 LINE L2 -1 3312 3265 194 203 31 78 chr5 170747929 170747993 -32337539 - MIR SINE MIR -121 141 81 2324 82 0 3 chr5 170748022 170748326 -32337206 + AluSg SINE Alu 1 303 -7 246 125 0 0 chr5 170748326 170748374 -32337158 + (CA)n Simple_repeat Simple_repeat 1 48 0 235 265 94 17 chr5 170748444 170748561 -32336971 + L1ME LINE L1 5574 5699 -422 2047 103 7 29 chr5 170748733 170749043 -32336489 - AluSg SINE Alu -7 303 1 2867 223 49 38 chr5 170749153 170749832 -32335700 + L1MB5 LINE L1 5338 6056 -124 1910 134 20 3 chr5 170749832 170750138 -32335394 + AluJb SINE Alu 1 311 -1 2867 223 49 38 chr5 170750138 170750265 -32335267 + L1MB5 LINE L1 6056 6180 0 445 250 140 61 chr5 170750248 170750676 -32334856 + L1ME4a LINE L1 5586 6047 -74 * 349 298 0 0 chr5 170750784 170750868 -32334664 - MIR SINE MIR -148 114 31 504 0 0 0 chr5 170750878 170750934 -32334598 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 186 43 0 0 chr5 170750954 170750977 -32334555 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 722 203 0 0 chr5 170750977 170751100 -32334432 - FLAM_C SINE Alu -19 124 2 301 214 29 14 chr5 170751281 170751351 -32334181 + L1ME4a LINE L1 6051 6121 0 193 267 109 10 chr5 170751752 170751853 -32333679 - MIR3 SINE MIR -34 174 64 498 303 30 5 chr5 170751999 170752197 -32333335 - L3 LINE CR1 -230 1347 1145 1952 104 4 4 chr5 170752730 170753008 -32332524 - AluSx SINE Alu -17 295 18 617 222 15 1 chr5 170753231 170753375 -32332157 - L1MC4 LINE L1 -226 7648 7438 649 262 55 75 chr5 170753551 170753898 -32331634 - MLT1I LTR MaLR -4 405 66 244 299 84 28 chr5 170753925 170754032 -32331500 + L2 LINE L2 3141 3253 -19 21 0 0 0 chr5 170754291 170754312 -32331220 + AT_rich Low_complexity Low_complexity 1 21 0 1637 168 0 14 chr5 170754660 170754951 -32330581 + AluJo SINE Alu 1 287 -25 607 221 51 134 chr5 170754969 170755245 -32330287 + MER102b DNA MER1_type 88 340 -1 384 279 31 8 chr5 170755365 170755494 -32330038 + MIR SINE MIR 61 192 -70 881 269 8 43 chr5 170755534 170755787 -32329745 - MIR SINE MIR -17 245 2 2232 87 13 10 chr5 170755813 170756125 -32329407 + AluSq SINE Alu 1 313 0 312 279 0 49 chr5 170756136 170756258 -32329274 - L1MC4 LINE L1 -1319 6723 6608 205 89 81 32 chr5 170756264 170756388 -32329144 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 304 178 67 44 chr5 170756390 170756480 -32329052 + L1MC4 LINE L1 6612 6703 -1339 188 98 16 49 chr5 170756483 170756544 -32328988 + (TA)n Simple_repeat Simple_repeat 2 60 0 284 217 28 36 chr5 170756554 170756620 -32328912 - MER5A DNA MER1_type -79 110 38 1784 147 7 23 chr5 170756620 170756920 -32328612 - AluJb SINE Alu -17 295 1 284 217 28 36 chr5 170756920 170756948 -32328584 - MER5A DNA MER1_type -151 38 11 521 338 67 25 chr5 170756955 170757239 -32328293 - L3 LINE CR1 -47 1530 1235 21 57 0 0 chr5 170757401 170757436 -32328096 + AT_rich Low_complexity Low_complexity 1 35 0 859 125 49 0 chr5 170757443 170757587 -32327945 - L1PA16 LINE L1 -1 6165 6015 230 0 0 32 chr5 170757587 170757618 -32327914 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 890 264 7 68 chr5 170757627 170757922 -32327610 - L3 LINE CR1 -354 1223 947 897 110 98 46 chr5 170758473 170758646 -32326886 - MER21A LTR ERV1 0 931 750 2365 165 40 5 chr5 170758665 170759065 -32326467 - MER21B LTR ERV1 -270 593 180 29 28 0 0 chr5 170759138 170759174 -32326358 + AT_rich Low_complexity Low_complexity 1 36 0 612 86 0 0 chr5 170759177 170759258 -32326274 - AluSg/x SINE Alu -22 287 207 1868 109 0 4 chr5 170759259 170759516 -32326016 - AluSc SINE Alu -53 256 1 1873 135 28 0 chr5 170759516 170759804 -32325728 - AluSx SINE Alu -16 296 1 189 0 0 0 chr5 170759874 170759895 -32325637 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2316 61 0 0 chr5 170759897 170760177 -32325355 - AluY SINE Alu -31 280 1 250 179 15 15 chr5 170760440 170760507 -32325025 + GA-rich Low_complexity Low_complexity 3 69 0 1917 152 0 3 chr5 170760554 170760857 -32324675 + AluSx SINE Alu 1 302 -10 422 187 97 116 chr5 170761356 170761511 -32324021 + MIR3 SINE MIR 34 185 -23 233 198 214 56 chr5 170761509 170761635 -32323897 - MIR SINE MIR -70 192 47 * 302 284 164 26 chr5 170761651 170761767 -32323765 + MIR SINE MIR 1 132 -130 182 236 36 36 chr5 170761895 170761950 -32323582 + MIR SINE MIR 91 145 -63 1988 155 0 0 chr5 170762156 170762466 -32323066 - AluJb SINE Alu -2 310 1 489 265 144 63 chr5 170762499 170762848 -32322684 - L1ME4a LINE L1 -1 6120 5698 2131 105 3 16 chr5 170762848 170763163 -32322369 + AluSx SINE Alu 1 311 -1 489 265 144 63 chr5 170763163 170763198 -32322334 - L1ME4a LINE L1 -423 5698 5667 2025 129 7 0 chr5 170763272 170763567 -32321965 + AluSx SINE Alu 1 297 -15 355 357 27 32 chr5 170763981 170764105 -32321427 + MER5A DNA MER1_type 1 125 -64 2253 95 0 7 chr5 170764105 170764411 -32321121 - AluSx SINE Alu -8 304 1 355 357 27 32 chr5 170764411 170764471 -32321061 + MER5A DNA MER1_type 125 184 -5 367 311 142 7 chr5 170764780 170764928 -32320604 + MIR3 SINE MIR 17 184 -24 791 279 166 55 chr5 170765063 170765629 -32319903 + L3 LINE CR1 947 1575 -2 2212 88 0 19 chr5 170765832 170766139 -32319393 - AluY SINE Alu -10 301 1 296 251 42 86 chr5 170766539 170766706 -32318826 - MIR3 SINE MIR -22 186 28 214 167 0 0 chr5 170767473 170767509 -32318023 - MIR SINE MIR -62 146 111 356 308 75 19 chr5 170767854 170768013 -32317519 + MIR3 SINE MIR 29 196 -12 1992 109 0 0 chr5 170768579 170768846 -32316686 - AluSx SINE Alu -45 267 1 2266 74 3 13 chr5 170768994 170769303 -32316229 - AluSx SINE Alu -6 306 1 1804 125 80 6 chr5 170769488 170769799 -32315733 + L1MA4A LINE L1 5965 6298 -5 1744 174 90 11 chr5 170770042 170770421 -32315111 - MLT1C LTR MaLR -6 461 53 408 234 135 27 chr5 170771239 170771553 -32313979 + Tigger8 DNA MER2_type 188 551 -115 461 259 102 34 chr5 170772072 170772338 -32313194 + L1ME4a LINE L1 5765 6048 -73 543 286 154 0 chr5 170772434 170772654 -32312878 - L3 LINE CR1 -74 1503 1250 493 277 17 0 chr5 170772859 170772978 -32312554 - MIR SINE MIR -57 205 85 419 256 54 29 chr5 170774141 170774301 -32311231 + MIR SINE MIR 22 149 -59 460 309 79 11 chr5 170774679 170774857 -32310675 + MIR3 SINE MIR 7 196 -12 366 275 114 30 chr5 170775073 170775240 -32310292 - MIR3 SINE MIR -4 204 24 470 243 191 0 chr5 170775965 170776117 -32309415 - MER5A DNA MER1_type -8 181 1 288 183 110 37 chr5 170776117 170776198 -32309334 - MIR3 SINE MIR -43 165 79 530 272 108 15 chr5 170776935 170777130 -32308402 - MIR SINE MIR -2 260 48 970 179 123 5 chr5 170777151 170777363 -32308169 - AluJo SINE Alu -69 243 7 1953 112 0 0 chr5 170777440 170777708 -32307824 - AluSx SINE Alu -17 295 28 726 225 62 11 chr5 170778210 170778388 -32307144 + MER5A DNA MER1_type 3 189 0 285 285 70 35 chr5 170778423 170778595 -32306937 + L1ME LINE L1 5653 5824 -297 976 182 0 0 chr5 170778694 170778859 -32306673 - AluJb SINE Alu -18 294 130 2156 122 0 0 chr5 170778877 170779173 -32306359 + AluSx SINE Alu 1 296 -16 1352 121 40 0 chr5 170779185 170779384 -32306148 + AluSx SINE Alu 1 207 -105 1696 100 35 11 chr5 170779384 170779645 -32305887 + AluY SINE Alu 41 307 -4 219 261 92 0 chr5 170779878 170779943 -32305589 + MIR3 SINE MIR 86 156 -52 1418 203 19 29 chr5 170779995 170780310 -32305222 + AluJo SINE Alu 1 312 0 808 269 69 62 chr5 170780536 170780942 -32304590 - MLT1I LTR MaLR 0 409 1 505 254 36 0 chr5 170780980 170781090 -32304442 - MER81 DNA DNA 0 114 1 290 318 35 0 chr5 170781424 170781509 -32304023 - L3 LINE CR1 -63 1514 1427 2279 86 0 3 chr5 170781728 170782029 -32303503 - AluSp SINE Alu -13 300 1 545 108 12 0 chr5 170782175 170782258 -32303274 + L1MA4 LINE L1 6197 6280 -20 381 268 95 82 chr5 170782576 170782957 -32302575 + MLT1J LTR MaLR 7 422 -89 1175 114 14 46 chr5 170782981 170783200 -32302332 + L1MA4 LINE L1 6084 6295 -5 1753 129 4 0 chr5 170783435 170783691 -32301841 + AluSx SINE Alu 1 257 -55 193 289 52 82 chr5 170783771 170783906 -32301626 + MER5A DNA MER1_type 2 132 -57 201 133 0 0 chr5 170783978 170784008 -32301524 + (GATTG)n Simple_repeat Simple_repeat 3 32 0 1988 135 0 3 chr5 170784290 170784586 -32300946 - AluJb SINE Alu -17 295 1 636 209 196 0 chr5 170784688 170784846 -32300686 + MER5A DNA MER1_type 1 189 0 431 286 46 46 chr5 170785889 170786085 -32299447 - MER102a DNA MER1_type -10 320 125 1145 167 6 0 chr5 170786085 170786259 -32299273 - FAM SINE Alu 0 175 1 1675 185 10 0 chr5 170786263 170786560 -32298972 - AluJb SINE Alu -11 301 2 228 271 0 71 chr5 170786740 170786825 -32298707 - L2 LINE L2 -202 3070 2992 319 310 47 60 chr5 170787632 170787701 -32297831 + L3 LINE CR1 1317 1385 -192 1919 127 0 0 chr5 170787701 170787977 -32297555 + AluSg SINE Alu 1 276 -34 255 31 0 0 chr5 170787981 170788013 -32297519 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 319 310 47 60 chr5 170788013 170788170 -32297362 + L3 LINE CR1 1388 1545 -32 2267 107 0 0 chr5 170788225 170788533 -32296999 - AluSc SINE Alu -1 308 1 3281 116 98 91 chr5 170788584 170788826 -32296706 + L1MA10 LINE L1 5524 5763 -571 2196 100 7 3 chr5 170788826 170789136 -32296396 + AluSx SINE Alu 1 311 -1 3281 116 98 91 chr5 170789136 170789573 -32295959 + L1MA10 LINE L1 5763 6208 -126 447 72 0 14 chr5 170791852 170791921 -32293611 + L1MA10 LINE L1 6258 6325 -9 2201 57 7 3 chr5 170791921 170792232 -32293300 - AluY SINE Alu 0 312 1 191 295 49 0 chr5 170792335 170792396 -32293136 + L2 LINE L2 3206 3269 -3 405 309 139 26 chr5 170792506 170792736 -32292796 - MIR SINE MIR -4 258 3 420 290 84 15 chr5 170793250 170793381 -32292151 + MIR3 SINE MIR 23 162 -46 528 225 100 40 chr5 170793482 170793497 -32292035 + Charlie8 DNA MER1_type 30 43 -2374 2009 121 0 6 chr5 170793497 170793810 -32291722 - AluSx SINE Alu -1 311 1 528 225 100 40 chr5 170793810 170793994 -32291538 + Charlie8 DNA MER1_type 43 241 -2176 184 250 39 19 chr5 170794500 170794552 -32290980 + MIR SINE MIR 3 55 -207 1116 124 10 36 chr5 170794647 170794841 -32290691 + AluSq SINE Alu 108 296 -17 2116 165 70 34 chr5 170794892 170795335 -32290197 - LTR2B LTR ERV1 0 490 32 519 270 169 0 chr5 170795559 170795707 -32289825 + MER5A DNA MER1_type 10 182 -7 546 253 173 0 chr5 170795718 170795868 -32289664 - MER5B DNA MER1_type 0 178 3 235 280 147 0 chr5 170796141 170796216 -32289316 + MIR SINE MIR 30 115 -93 467 249 32 104 chr5 170796222 170796329 -32289203 - Charlie8 DNA MER1_type -2211 206 122 2001 55 23 71 chr5 170796329 170796637 -32288895 - AluSg SINE Alu -12 298 6 467 249 32 104 chr5 170796637 170796750 -32288782 - Charlie8 DNA MER1_type -2295 122 2 2091 74 42 165 chr5 170796794 170797224 -32288308 - MER51B LTR ERV1 0 377 1 1797 134 30 13 chr5 170797406 170797705 -32287827 - AluJb SINE Alu -8 304 1 554 244 49 37 chr5 170797839 170798003 -32287529 - MER5B DNA MER1_type -9 169 4 226 256 154 39 chr5 170798080 170798236 -32287296 + L2 LINE L2 3021 3194 -119 423 203 29 67 chr5 170798335 170798471 -32287061 - MIR SINE MIR -45 163 38 2064 132 41 64 chr5 170799231 170799346 -32286186 - MER51A LTR ERV1 0 634 518 1956 111 3 7 chr5 170799346 170799643 -32285889 + AluSx SINE Alu 3 298 -14 2064 132 41 64 chr5 170799643 170799910 -32285622 - MER51A LTR ERV1 -116 518 196 1622 138 59 14 chr5 170799910 170800200 -32285332 + AluSx SINE Alu 1 303 -9 2064 132 41 64 chr5 170800200 170800392 -32285140 - MER51A LTR ERV1 -438 196 1 2115 150 9 0 chr5 170800398 170800724 -32284808 - MER51A-int LTR ERV1 -4 7812 7484 1633 300 56 30 chr5 170800879 170801936 -32283596 - MER51A-int LTR ERV1 -1675 6081 4633 309 267 39 39 chr5 170802046 170802217 -32283315 - MER51A-int LTR ERV1 -5018 3619 2637 547 313 9 39 chr5 170802976 170803311 -32282221 - MER51A-int LTR ERV1 -4010 2666 2342 439 321 21 50 chr5 170803956 170804236 -32281296 - MER51A-int LTR ERV1 -5277 1814 1543 359 274 12 77 chr5 170804255 170804423 -32281109 - MER51A-int LTR ERV1 -6967 849 693 2282 72 3 0 chr5 170804455 170804748 -32280784 - AluY SINE Alu -16 295 2 252 192 0 103 chr5 170804783 170804861 -32280671 - MER51A-int LTR ERV1 -2438 2577 2508 1267 173 87 77 chr5 170804880 170805203 -32280329 - MER51A-int LTR ERV1 -4378 502 224 1227 162 48 70 chr5 170805268 170805540 -32279992 - MER51A-int LTR ERV1 -7550 266 1 3635 122 54 40 chr5 170805540 170806165 -32279367 - MER51A LTR ERV1 0 634 1 233 217 0 17 chr5 170806215 170806275 -32279257 + L1MD3 LINE L1 7807 7865 -130 266 70 211 18 chr5 170806418 170806475 -32279057 + L1MD3 LINE L1 7928 7995 0 344 239 45 11 chr5 170806711 170806799 -32278733 + MIR SINE MIR 56 146 -116 1728 85 4 8 chr5 170806896 170807143 -32278389 + AluSc SINE Alu 57 302 -7 399 223 10 83 chr5 170807296 170807489 -32278043 + (CCCCG)n Simple_repeat Simple_repeat 1 179 0 1383 124 3 178 chr5 170808495 170808849 -32276683 - L1MA6 LINE L1 -407 5893 5602 307 179 0 0 chr5 170808849 170808905 -32276627 + L1MA7 LINE L1 5911 5966 -325 930 131 0 0 chr5 170808905 170809042 -32276490 - FRAM SINE Alu -30 146 10 403 165 44 33 chr5 170809053 170809114 -32276418 + L1MA7 LINE L1 6047 6111 -180 1964 124 76 42 chr5 170809114 170809468 -32276064 - MER47A DNA MER2_type 0 366 1 403 165 44 33 chr5 170809468 170809497 -32276035 + L1MA7 LINE L1 6111 6138 -153 301 161 0 0 chr5 170809498 170809554 -32275978 + L1MA7 LINE L1 6235 6290 -1 1666 156 16 33 chr5 170809559 170809866 -32275666 + AluJb SINE Alu 1 302 -10 202 373 9 36 chr5 170810073 170810183 -32275349 + MIR SINE MIR 110 216 -46 189 379 15 0 chr5 170810601 170810667 -32274865 + MIR SINE MIR 31 97 -111 182 310 0 0 chr5 170810751 170810809 -32274723 - MIR SINE MIR -1 261 204 1467 165 41 68 chr5 170810824 170810857 -32274675 - L1MD3 LINE L1 -20 7975 7943 2004 125 3 22 chr5 170810857 170811170 -32274362 + AluSx SINE Alu 1 307 -5 1467 165 41 68 chr5 170811170 170811476 -32274056 - L1MD3 LINE L1 -52 7943 7645 447 231 71 95 chr5 170811484 170811697 -32273835 - MIR SINE MIR -52 210 2 550 294 221 13 chr5 170812140 170812616 -32272916 + L2 LINE L2 2741 3310 -3 394 293 68 34 chr5 170812798 170813003 -32272529 - MIR SINE MIR -14 248 37 194 272 19 107 chr5 170814108 170814211 -32271321 - MIR SINE MIR -92 170 77 2072 140 0 0 chr5 170814876 170815183 -32270349 + AluSx SINE Alu 1 307 -5 1708 178 0 0 chr5 170815577 170815864 -32269668 - AluJo SINE Alu -25 287 1 324 174 81 0 chr5 170815870 170815956 -32269576 - L1ME LINE L1 -298 5823 5731 1855 145 0 0 chr5 170815964 170816278 -32269254 - AluSx SINE Alu 0 314 1 979 113 0 0 chr5 170816280 170816413 -32269119 - AluSq/x SINE Alu -179 133 1 324 193 118 74 chr5 170816564 170816699 -32268833 - L1ME LINE L1 -911 5433 5293 295 313 14 35 chr5 170816883 170817027 -32268505 + MIR SINE MIR 112 252 -10 1854 116 81 0 chr5 170817625 170817909 -32267623 - AluSx SINE Alu -5 307 1 29 0 0 0 chr5 170817923 170817952 -32267580 + AT_rich Low_complexity Low_complexity 1 29 0 203 241 43 86 chr5 170818032 170818148 -32267384 - MIR SINE MIR -129 133 23 477 196 77 103 chr5 170819145 170819238 -32266294 - MIR SINE MIR -37 225 131 1993 143 0 7 chr5 170819238 170819538 -32265994 + AluSx SINE Alu 1 298 -14 477 196 77 103 chr5 170819538 170819638 -32265894 - MIR SINE MIR -131 131 37 262 191 0 0 chr5 170819981 170820028 -32265504 - MIR3 SINE MIR 0 208 162 216 331 173 29 chr5 170820373 170820512 -32265020 - L3 LINE CR1 -135 1442 1284 364 247 25 0 chr5 170820542 170820623 -32264909 + MER117 DNA MER1_type 32 114 -83 1467 124 4 21 chr5 170820737 170820970 -32264562 + AluJo SINE Alu 1 229 -83 236 256 26 39 chr5 170820999 170821077 -32264455 + MER117 DNA MER1_type 76 152 -45 182 250 21 0 chr5 170821120 170821168 -32264364 + MIR3 SINE MIR 151 199 -9 298 256 49 40 chr5 170821551 170821687 -32263845 + MIR3 SINE MIR 65 202 -6 2114 107 7 0 chr5 170822694 170822992 -32262540 - AluSc SINE Alu -9 300 1 426 252 60 73 chr5 170823116 170823334 -32262198 - Charlie8 DNA MER1_type -2152 265 51 1491 202 95 50 chr5 170824009 170824494 -32261038 + MER84 LTR ERV1 1 507 0 3839 225 105 22 chr5 170824701 170826148 -32259384 + L1MC4a LINE L1 4903 5372 -774 2972 204 98 10 chr5 170826151 170826332 -32259200 + L1MC4a LINE L1 6924 7088 -720 2086 103 3 13 chr5 170826332 170826633 -32258899 + AluSx SINE Alu 1 298 -14 2972 204 98 10 chr5 170826633 170827293 -32258239 + L1MC4a LINE L1 7088 7808 0 3459 57 28 9 chr5 170827347 170827783 -32257749 - MLT2A1 LTR ERVL 0 444 1 257 284 166 24 chr5 170827853 170828064 -32257468 - L2 LINE L2 -215 3057 2817 1806 78 55 0 chr5 170828068 170828324 -32257208 - AluY SINE Alu -1 310 41 2148 112 0 28 chr5 170828793 170829114 -32256418 - AluSq SINE Alu -1 312 1 850 139 0 22 chr5 170830329 170830466 -32255066 + AluJo SINE Alu 1 134 -178 2521 235 34 18 chr5 170830625 170831301 -32254231 - L1ME1 LINE L1 -5 6161 5475 344 319 113 19 chr5 170831339 170831499 -32254033 - MIR3 SINE MIR -15 193 19 286 242 142 50 chr5 170832429 170832549 -32252983 - MIR3 SINE MIR -28 180 50 193 356 34 0 chr5 170832586 170832645 -32252887 + L2 LINE L2 3239 3299 -14 32 67 0 0 chr5 170832952 170833012 -32252520 + AT_rich Low_complexity Low_complexity 1 60 0 479 207 0 16 chr5 170833013 170833134 -32252398 - L1MA4 LINE L1 -11 6289 6171 675 286 101 58 chr5 170833467 170834006 -32251526 + L2 LINE L2 2712 3312 -1 438 348 92 37 chr5 170834231 170834559 -32250973 - L3 LINE CR1 -81 1496 1151 2032 104 7 0 chr5 170834713 170835015 -32250517 + AluSx SINE Alu 1 304 0 345 238 38 0 chr5 170835145 170835225 -32250307 + MIR SINE MIR 48 130 -132 326 295 29 9 chr5 170835373 170835478 -32250054 - MIR SINE MIR -61 147 63 344 113 57 0 chr5 170835810 170835863 -32249669 + Tigger4(Zombi) DNA MER2_type 3 58 -2673 * 491 139 0 0 chr5 170835833 170835905 -32249627 + Tigger4(Zombi) DNA MER2_type 2660 2731 0 209 242 197 15 chr5 170835961 170836027 -32249505 - MER5A DNA MER1_type -24 165 88 2147 102 0 13 chr5 170836075 170836379 -32249153 + AluSx SINE Alu 1 300 -12 183 250 0 0 chr5 170836553 170836605 -32248927 + (CATA)n Simple_repeat Simple_repeat 4 55 0 548 73 0 0 chr5 170836647 170836729 -32248803 - AluSp SINE Alu 0 313 232 273 32 0 0 chr5 170836729 170836760 -32248772 - U2 snRNA snRNA -156 32 2 1767 113 4 0 chr5 170836760 170837007 -32248525 - AluSp SINE Alu -65 248 1 588 299 71 4 chr5 170837015 170837296 -32248236 - L1MC4a LINE L1 -1939 5869 5570 2195 108 0 6 chr5 170837410 170837724 -32247808 - AluSx SINE Alu 0 312 1 291 201 19 78 chr5 170837738 170837884 -32247648 - L1MC4a LINE L1 -749 5397 5262 181 211 268 14 chr5 170837927 170837998 -32247534 - MIR3 SINE MIR -52 156 68 433 284 10 0 chr5 170838231 170838333 -32247199 - MIR SINE MIR -1 261 159 805 222 116 10 chr5 170838337 170838544 -32246988 + MLT1I LTR MaLR 5 233 -176 482 254 22 15 chr5 170839401 170839414 -32246118 - MIR3 SINE MIR -44 164 153 2129 181 33 15 chr5 170839414 170839872 -32245660 - L1MB4 LINE L1 -1 6179 5714 482 254 22 15 chr5 170839872 170839992 -32245540 - MIR3 SINE MIR -55 153 30 1638 184 109 50 chr5 170840093 170840570 -32244962 + MLT1D LTR MaLR 1 505 0 692 171 8 26 chr5 170840722 170840839 -32244693 + MER2 DNA MER2_type 2 116 -229 1869 164 11 0 chr5 170840844 170841130 -32244402 - AluJo SINE Alu -23 289 1 442 308 6 23 chr5 170841371 170841543 -32243989 + L2 LINE L2 3139 3307 -6 297 135 0 0 chr5 170841560 170841612 -32243920 + (ATG)n Simple_repeat Simple_repeat 2 53 0 656 217 43 22 chr5 170842032 170842216 -32243316 - MER53 DNA DNA -1 188 1 395 327 126 11 chr5 170842605 170842874 -32242658 - L3 LINE CR1 -295 1282 983 23 33 0 0 chr5 170843089 170843119 -32242413 + AT_rich Low_complexity Low_complexity 1 30 0 344 233 21 101 chr5 170843129 170843239 -32242293 - L1MC4 LINE L1 -1 8041 7951 197 65 32 0 chr5 170843239 170843270 -32242262 + (TA)n Simple_repeat Simple_repeat 1 32 0 344 233 21 101 chr5 170843270 170843348 -32242184 - L1MC4 LINE L1 -91 7951 7868 1965 116 4 4 chr5 170843350 170843618 -32241914 + AluSx SINE Alu 35 302 -10 340 213 13 27 chr5 170843764 170843839 -32241693 + MER2 DNA MER2_type 27 100 -245 726 168 0 0 chr5 170843936 170844049 -32241483 + AluJb SINE Alu 185 297 -15 198 0 0 0 chr5 170844131 170844153 -32241379 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1259 231 161 22 chr5 170844175 170844708 -32240824 - L1MC4 LINE L1 -462 7580 6974 190 300 33 0 chr5 170844822 170844882 -32240650 + MER5A DNA MER1_type 57 118 -71 975 221 65 102 chr5 170844954 170845152 -32240380 - L1MC5 LINE L1 -48 7913 7709 2264 43 0 0 chr5 170845152 170845408 -32240124 + AluY SINE Alu 1 256 -55 216 0 0 0 chr5 170845417 170845441 -32240091 + (TAA)n Simple_repeat Simple_repeat 2 25 0 975 221 65 102 chr5 170845441 170845522 -32240010 - L1MC5 LINE L1 -260 7701 7618 1713 171 17 13 chr5 170845522 170845820 -32239712 - AluJb SINE Alu -13 299 1 975 221 65 102 chr5 170845820 170846195 -32239337 - L1MC5 LINE L1 -342 7619 7273 2259 102 0 0 chr5 170846393 170846699 -32238833 - AluSx SINE Alu 0 306 1 21 36 0 0 chr5 170846758 170846786 -32238746 + AT_rich Low_complexity Low_complexity 1 28 0 229 292 117 65 chr5 170846956 170847110 -32238422 + MIR SINE MIR 47 208 -54 280 238 40 30 chr5 170847137 170847238 -32238294 + L1MC/D LINE L1 5724 5825 -1983 2212 106 0 0 chr5 170847240 170847523 -32238009 + AluSq SINE Alu 1 283 -30 235 222 0 0 chr5 170848275 170848320 -32237212 + GA-rich Low_complexity Low_complexity 6 50 0 2345 84 3 3 chr5 170849170 170849467 -32236065 - AluSp SINE Alu -16 297 1 651 228 152 9 chr5 170849705 170849916 -32235616 + MIR SINE MIR 9 249 -13 237 290 40 48 chr5 170850461 170850585 -32234947 - MIR SINE MIR -69 139 17 424 226 20 10 chr5 170850966 170851068 -32234464 - L3 LINE CR1 -72 1505 1403 895 191 22 78 chr5 170851203 170851434 -32234098 - MER20 DNA MER1_type 0 219 2 275 304 67 37 chr5 170851445 170851580 -32233952 - L3 LINE CR1 -454 1123 985 406 269 42 0 chr5 170851619 170851738 -32233794 + L2 LINE L2 3186 3309 -4 207 347 75 48 chr5 170852066 170852213 -32233319 - L2 LINE L2 0 3272 3122 2195 109 7 0 chr5 170852220 170852524 -32233008 + AluSx SINE Alu 1 306 -6 266 274 16 0 chr5 170852793 170852855 -32232677 - Charlie8 DNA MER1_type -989 1428 1366 360 0 0 0 chr5 170853764 170853804 -32231728 + (TC)n Simple_repeat Simple_repeat 2 41 0 243 0 0 0 chr5 170853803 170853830 -32231702 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 257 0 30 0 chr5 170853911 170853944 -32231588 + (TA)n Simple_repeat Simple_repeat 2 35 0 215 268 53 78 chr5 170854194 170854382 -32231150 + MIR SINE MIR 25 202 -59 229 89 44 0 chr5 170854420 170854465 -32231067 + (CAT)n Simple_repeat Simple_repeat 1 47 0 2573 170 33 82 chr5 170855590 170856202 -32229330 + LTR8 LTR ERV1 1 582 -109 689 48 0 0 chr5 170856202 170856286 -32229246 + AluY SINE Alu 215 298 -13 918 109 0 0 chr5 170856287 170856406 -32229126 + LTR8 LTR ERV1 573 691 0 312 250 80 0 chr5 170856759 170856847 -32228685 - L1ME LINE L1 -545 5576 5482 2275 112 0 9 chr5 170856940 170857270 -32228262 + L1PA10 LINE L1 5823 6149 -19 186 71 0 0 chr5 170857270 170857298 -32228234 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 1330 261 33 24 chr5 170858559 170859019 -32226513 - L2 LINE L2 -2 3311 2848 405 206 0 0 chr5 170859094 170859167 -32226365 + FLAM_A SINE Alu 1 73 -69 2039 137 0 0 chr5 170859200 170859508 -32226024 + AluSq SINE Alu 1 308 0 1407 212 42 85 chr5 170859549 170860006 -32225526 - L2 LINE L2 -469 2845 2409 1230 171 10 0 chr5 170860272 170860477 -32225055 - AluJb SINE Alu -1 311 105 2338 88 0 13 chr5 170860480 170860785 -32224747 + AluSx SINE Alu 1 301 -11 7668 163 18 16 chr5 170861107 170861744 -32223788 - L1 LINE L1 -2451 5114 4479 2195 116 3 7 chr5 170861744 170862046 -32223486 - AluSx SINE Alu -11 301 1 7668 163 18 16 chr5 170862046 170863552 -32221980 - L1 LINE L1 -3086 4479 2966 4611 114 28 154 chr5 170863552 170865082 -32220450 + pTR5 LTR ERV1 6 714 0 16776 141 69 12 chr5 170865082 170867883 -32217649 - L1 LINE L1 -4589 2976 16 558 263 25 6 chr5 170867965 170868125 -32217407 + MIR SINE MIR 52 214 -48 299 337 85 62 chr5 170869273 170869476 -32216056 + L2 LINE L2 3008 3220 -52 675 233 131 102 chr5 170869476 170869887 -32215645 - MLT1H LTR MaLR -2 547 116 2312 112 7 0 chr5 170869887 170870191 -32215341 + AluSx SINE Alu 1 306 -6 675 233 131 102 chr5 170870191 170870307 -32215225 - MLT1H LTR MaLR -433 116 5 299 337 85 62 chr5 170870307 170870361 -32215171 + L2 LINE L2 3220 3271 -1 2385 92 3 0 chr5 170870999 170871304 -32214228 + AluSp SINE Alu 1 306 -7 2166 136 0 7 chr5 170871710 170872011 -32213521 + AluSx SINE Alu 1 299 -13 636 194 73 0 chr5 170872127 170872251 -32213281 + FLAM_A SINE Alu 1 133 0 293 173 87 58 chr5 170872325 170872429 -32213103 - MER34 LTR ERV1 -12 530 424 204 0 26 53 chr5 170872942 170872980 -32212552 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 418 168 66 0 chr5 170873000 170873167 -32212365 + (TA)n Simple_repeat Simple_repeat 1 178 0 196 228 120 43 chr5 170873557 170873649 -32211883 + MIR SINE MIR 82 180 -82 510 188 17 0 chr5 170874953 170875075 -32210457 + L1MB1 LINE L1 5740 5866 -317 380 266 114 59 chr5 170875171 170875408 -32210124 - Charlie8 DNA MER1_type -2141 276 27 679 250 71 46 chr5 170875442 170875682 -32209850 + MIR SINE MIR 16 261 -1 1537 159 0 66 chr5 170875683 170876012 -32209520 - AluJb SINE Alu 0 322 13 348 207 103 0 chr5 170876108 170876195 -32209337 + MIR SINE MIR 166 261 -1 2120 130 7 0 chr5 170876219 170876518 -32209014 - AluSx SINE Alu -11 301 1 225 253 72 48 chr5 170877380 170877463 -32208069 - L1 LINE L1 -2202 3944 3860 2075 124 3 0 chr5 170877495 170877829 -32207703 + AluSx SINE Alu 2 336 0 340 316 10 0 chr5 170878035 170878133 -32207399 - MIR SINE MIR -117 145 47 1074 167 36 10 chr5 170878682 170878847 -32206685 - AluSg/x SINE Alu 0 305 146 378 0 0 0 chr5 170878847 170878889 -32206643 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2238 99 3 0 chr5 170878889 170879172 -32206360 - AluSq SINE Alu -29 284 1 1074 167 36 10 chr5 170879172 170879221 -32206311 - AluSg/x SINE Alu -158 147 85 926 211 0 23 chr5 170879223 170879398 -32206134 - AluJo SINE Alu -59 253 83 200 281 234 0 chr5 170879667 170879795 -32205737 + MIR3 SINE MIR 30 187 -21 241 336 0 18 chr5 170880013 170880053 -32205479 + GA-rich Low_complexity Low_complexity 2 41 -71 2643 171 40 11 chr5 170880053 170880581 -32204951 + L1MB2 LINE L1 5629 6171 0 241 336 0 18 chr5 170880581 170880653 -32204879 + GA-rich Low_complexity Low_complexity 41 112 0 246 188 62 47 chr5 170880739 170880803 -32204729 + Charlie8 DNA MER1_type 26 90 -2327 1878 153 14 10 chr5 170881353 170881647 -32203885 - AluJb SINE Alu -9 303 9 377 305 43 37 chr5 170881758 170881918 -32203614 - MIR SINE MIR -63 145 15 183 80 0 0 chr5 170882286 170882311 -32203221 + (TC)n Simple_repeat Simple_repeat 1 25 0 317 268 57 8 chr5 170882367 170882490 -32203042 + MIR3 SINE MIR 30 158 -50 185 231 0 0 chr5 170882535 170882574 -32202958 + L2 LINE L2 3271 3309 -4 526 330 43 31 chr5 170882710 170883034 -32202498 + L1ME4a LINE L1 2 329 -6211 604 279 114 0 chr5 170883257 170883415 -32202117 - MER45A DNA AcHobo 0 178 3 1659 264 36 20 chr5 170883762 170884349 -32201183 + L1ME4a LINE L1 908 1503 -5040 1088 196 4 109 chr5 170884351 170884617 -32200915 - MER8 DNA MER2_type 0 239 2 1882 252 91 27 chr5 170884618 170885482 -32200050 + L1ME4a LINE L1 1503 2422 -4118 1820 189 8 110 chr5 170885472 170885843 -32199689 + L1ME4a LINE L1 5135 5440 -1100 * 1789 144 16 26 chr5 170885843 170886148 -32199384 - AluJo SINE Alu 0 312 11 1820 189 8 110 chr5 170886148 170886295 -32199237 + L1ME4a LINE L1 5440 5600 -940 513 243 0 9 chr5 170886306 170886413 -32199119 + FLAM_A SINE Alu 11 116 -26 2201 123 0 0 chr5 170886414 170886707 -32198825 - AluSx SINE Alu -19 293 1 918 184 75 0 chr5 170886745 170886946 -32198586 + L1ME4a LINE L1 5582 5797 -743 * 1179 247 30 7 chr5 170886923 170887227 -32198305 + L1ME1 LINE L1 6048 6358 -202 255 311 48 0 chr5 170887231 170887334 -32198198 + L1ME1 LINE L1 6436 6543 -17 1988 85 93 0 chr5 170888123 170888393 -32197139 + AluSg SINE Alu 1 295 -15 2168 103 0 3 chr5 170888948 170889269 -32196263 + AluSx SINE Alu 1 312 0 1847 125 96 0 chr5 170890289 170890561 -32194971 + AluSx SINE Alu 2 299 -13 189 0 0 0 chr5 170891001 170891022 -32194510 + (T)n Simple_repeat Simple_repeat 1 21 0 431 255 36 21 chr5 170891094 170891236 -32194296 - MER20B DNA MER1_type -19 200 54 616 253 140 11 chr5 170892128 170892393 -32193139 + L1ME4a LINE L1 5955 6253 -262 180 77 0 0 chr5 170892443 170892469 -32193063 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 554 292 101 9 chr5 170892474 170892693 -32192839 + MIR SINE MIR 3 241 -21 1836 174 13 7 chr5 170892937 170893242 -32192290 + AluJo SINE Alu 1 307 -5 196 245 191 21 chr5 170893459 170893553 -32191979 - MIR3 SINE MIR -29 179 70 2268 95 17 0 chr5 170893856 170894151 -32191381 - AluSp SINE Alu -13 300 1 296 323 61 0 chr5 170894342 170894441 -32191091 - L2 LINE L2 -32 3240 3136 233 333 10 20 chr5 170894552 170894651 -32190881 + GA-rich Low_complexity Low_complexity 1 98 0 803 144 6 22 chr5 170894692 170894872 -32190660 + GA-rich Low_complexity Low_complexity 1 177 0 262 336 120 29 chr5 170895027 170895378 -32190154 - L2 LINE L2 -1135 2179 1797 269 320 0 0 chr5 170895400 170895478 -32190054 + L2 LINE L2 3230 3307 -6 586 116 0 0 chr5 170895553 170895639 -32189893 - L1PA7 LINE L1 -8 6146 6061 751 294 61 29 chr5 170896331 170896874 -32188658 + L2 LINE L2 2275 2956 -358 258 341 23 0 chr5 170897086 170897174 -32188358 + L2 LINE L2 3126 3215 -57 182 254 113 0 chr5 170897225 170897296 -32188236 + L3 LINE CR1 1415 1493 -84 422 204 37 19 chr5 170898473 170898581 -32186951 - MIR3 SINE MIR -51 157 48 296 163 20 0 chr5 170898962 170899011 -32186521 - MER81 DNA DNA 0 114 65 626 237 114 22 chr5 170899013 170899241 -32186291 - MIR SINE MIR -2 260 12 271 258 54 0 chr5 170899296 170899389 -32186143 - MIR SINE MIR -117 145 48 229 346 0 19 chr5 170899840 170899947 -32185585 + MIR SINE MIR 20 124 -138 192 277 0 21 chr5 170900319 170900366 -32185166 + MIR SINE MIR 23 68 -140 194 347 116 0 chr5 170900475 170900570 -32184962 - MIR SINE MIR -123 139 34 200 196 0 22 chr5 170901056 170901102 -32184430 - MIR SINE MIR -148 60 16 211 316 120 30 chr5 170901553 170901686 -32183846 + MIR3 SINE MIR 49 193 -15 386 274 208 6 chr5 170902310 170902478 -32183054 - MIR SINE MIR -2 260 59 506 174 13 148 chr5 170903099 170903254 -32182278 + MER69A DNA AcHobo 44 177 0 295 165 6 32 chr5 170903276 170903355 -32182177 - MIR SINE MIR -67 141 62 181 0 33 33 chr5 170903389 170903419 -32182113 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 185 338 72 50 chr5 170903975 170904114 -32181418 + MIR3 SINE MIR 30 171 -37 188 333 30 10 chr5 170904374 170904473 -32181059 - MER5B DNA MER1_type -77 101 1 225 0 0 0 chr5 170904661 170904686 -32180846 + (CCA)n Simple_repeat Simple_repeat 2 26 0 620 182 0 15 chr5 170904827 170904959 -32180573 - MIR SINE MIR -95 167 38 1697 136 68 0 chr5 170905262 170905512 -32180020 - AluJb SINE Alu -24 288 22 240 261 160 8 chr5 170905556 170905675 -32179857 + MIR SINE MIR 107 243 -19 260 318 26 40 chr5 170905709 170905860 -32179672 - MIR3 SINE MIR -26 182 34 611 63 0 0 chr5 170905866 170905945 -32179587 + AluSp/q SINE Alu 219 297 -16 557 310 132 24 chr5 170906259 170906954 -32178578 + L2 LINE L2 2536 3310 -3 1478 196 44 72 chr5 170907011 170907440 -32178092 - MLT1D LTR MaLR 0 505 89 1309 139 239 0 chr5 170907436 170907687 -32177845 - MER21A LTR ERV1 -606 325 15 * 180 219 0 0 chr5 170907707 170907748 -32177784 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 294 227 45 20 chr5 170907790 170907902 -32177630 - MIR SINE MIR -56 152 35 3857 137 26 32 chr5 170907952 170908570 -32176962 - L1MC1 LINE L1 -7 6326 5711 2268 115 0 0 chr5 170908570 170908874 -32176658 + AluSx SINE Alu 2 305 -7 3857 137 26 32 chr5 170908874 170908943 -32176589 - L1MC1 LINE L1 -622 5711 5643 313 206 29 0 chr5 170909066 170909134 -32176398 - MIR3 SINE MIR -24 184 115 406 285 38 31 chr5 170909253 170909499 -32176033 - MLT1K LTR MaLR -304 284 2 372 231 50 46 chr5 170909607 170909812 -32175720 - LTR38B LTR ERV1 0 592 400 794 256 80 23 chr5 170909957 170910258 -32175274 + L1MC4a LINE L1 5562 5879 -1929 22 0 0 0 chr5 170910552 170910574 -32174958 + AT_rich Low_complexity Low_complexity 1 22 0 1972 132 4 0 chr5 170910632 170910912 -32174620 + AluSx SINE Alu 28 308 -4 182 215 108 0 chr5 170911602 170911667 -32173865 - MIR SINE MIR -99 163 92 1212 215 5 0 chr5 170912080 170912303 -32173229 + MER58A DNA MER1_type 1 224 0 1295 245 94 10 chr5 170912412 170912804 -32172728 - MER57B LTR ERV1 0 434 10 1521 166 74 0 chr5 170912808 170913079 -32172453 - AluJo SINE Alu 0 312 22 247 221 19 125 chr5 170913174 170913238 -32172294 - MER5A DNA MER1_type -1 188 138 2931 9 0 3 chr5 170913238 170913554 -32171978 + AluYb8 SINE Alu 1 315 -3 247 221 19 125 chr5 170913554 170913593 -32171939 - MER5A DNA MER1_type -51 138 96 2043 221 25 65 chr5 170914029 170914640 -32170892 - L1MB8 LINE L1 -2 6176 5591 22 56 0 0 chr5 170914640 170914676 -32170856 + AT_rich Low_complexity Low_complexity 1 36 0 6471 147 25 34 chr5 170914698 170915811 -32169721 - Tigger2 DNA MER2_type 0 2718 1616 2972 210 55 7 chr5 170916130 170916879 -32168653 - L1M1 LINE L1 -4421 3144 2360 242 125 25 0 chr5 170916886 170916926 -32168606 - L1M1 LINE L1 -4151 2414 2374 2120 123 20 7 chr5 170916929 170917230 -32168302 - AluSx SINE Alu -7 305 1 7762 200 33 38 chr5 170917231 170918695 -32166837 - L1MB8 LINE L1 -1830 4316 2863 2216 115 7 0 chr5 170918695 170918990 -32166542 + AluSq SINE Alu 1 297 -16 7762 200 33 38 chr5 170918990 170919501 -32166031 - L1MB8 LINE L1 -3283 2863 2351 447 216 35 9 chr5 170920390 170920506 -32165026 + MIR SINE MIR 96 214 -48 312 333 85 62 chr5 170921652 170921855 -32163677 + L2 LINE L2 3008 3220 -52 675 233 131 102 chr5 170921855 170922266 -32163266 - MLT1H LTR MaLR -2 547 116 2324 111 0 3 chr5 170922266 170922573 -32162959 + AluSx SINE Alu 1 306 -6 675 233 131 102 chr5 170922573 170922689 -32162843 - MLT1H LTR MaLR -433 116 5 312 333 85 62 chr5 170922689 170922743 -32162789 + L2 LINE L2 3220 3271 -1 2379 88 3 3 chr5 170923381 170923689 -32161843 + AluSp SINE Alu 1 308 -5 2180 133 0 7 chr5 170924095 170924396 -32161136 + AluSx SINE Alu 1 299 -13 636 194 73 0 chr5 170924512 170924636 -32160896 + FLAM_A SINE Alu 1 133 0 293 173 87 58 chr5 170924710 170924814 -32160718 - MER34 LTR ERV1 -12 530 424 204 0 26 53 chr5 170925328 170925366 -32160166 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 51 0 0 0 chr5 170925369 170925420 -32160112 + AT_rich Low_complexity Low_complexity 1 51 0 191 59 0 29 chr5 170925424 170925458 -32160074 + (TAAAAA)n Simple_repeat Simple_repeat 5 37 0 307 163 51 0 chr5 170925458 170925556 -32159976 + (TA)n Simple_repeat Simple_repeat 2 104 0 196 228 120 43 chr5 170925943 170926035 -32159497 + MIR SINE MIR 82 180 -82 510 190 12 9 chr5 170927321 170927462 -32158070 + L1MB1 LINE L1 5724 5866 -317 380 266 114 59 chr5 170927558 170927795 -32157737 - Charlie8 DNA MER1_type -2141 276 27 635 258 71 46 chr5 170927829 170928069 -32157463 + MIR SINE MIR 16 261 -1 1563 167 0 60 chr5 170928070 170928401 -32157131 - AluJb SINE Alu 0 314 2 348 207 103 0 chr5 170928486 170928573 -32156959 + MIR SINE MIR 166 261 -1 2112 131 7 0 chr5 170928597 170928895 -32156637 - AluSx SINE Alu -12 300 1 225 253 72 48 chr5 170929757 170929840 -32155692 - L1 LINE L1 -2202 3944 3860 2075 124 3 0 chr5 170929872 170930210 -32155322 + AluSx SINE Alu 2 340 0 340 304 39 0 chr5 170930413 170930515 -32155017 - MIR SINE MIR -56 152 47 981 135 28 0 chr5 170931063 170931228 -32154304 - AluSg/x SINE Alu 0 305 137 381 22 0 0 chr5 170931228 170931274 -32154258 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2282 75 7 0 chr5 170931274 170931554 -32153978 - AluSp SINE Alu -30 283 2 800 181 93 5 chr5 170931605 170931798 -32153734 - MER33 DNA MER1_type -96 228 19 775 243 82 24 chr5 170931817 170932158 -32153374 + L1M4 LINE L1 3000 3360 -2786 691 119 0 0 chr5 170932165 170932266 -32153266 + AluSq/x SINE Alu 40 140 -172 4851 100 37 3 chr5 170933240 170933908 -32151624 + LTR8 LTR ERV1 1 691 0 742 54 0 0 chr5 170934894 170934986 -32150546 - AluY SINE Alu -218 93 2 2465 83 0 0 chr5 170935495 170935796 -32149736 - AluSx SINE Alu -11 301 1 289 267 23 0 chr5 170936089 170936175 -32149357 + MIR SINE MIR 31 118 -90 366 248 243 24 chr5 170936524 170936734 -32148798 - L3 LINE CR1 -11 1566 1311 321 141 0 0 chr5 170936889 170936960 -32148572 + (TG)n Simple_repeat Simple_repeat 1 71 0 225 65 0 0 chr5 170936959 170936990 -32148542 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 351 208 212 75 chr5 170937077 170937289 -32148243 + MER102b DNA MER1_type 82 322 -19 208 180 16 33 chr5 170937623 170937684 -32147848 + (CAAA)n Simple_repeat Simple_repeat 3 62 0 2194 98 0 26 chr5 170937794 170938099 -32147433 - AluSg SINE Alu -13 297 1 1008 180 0 0 chr5 170939527 170939688 -32145844 - FRAM SINE Alu -16 160 1 2339 173 35 16 chr5 170939718 170940147 -32145385 + MER4E LTR ERV1 1 437 -342 2167 113 3 0 chr5 170940149 170940449 -32145083 + AluSp SINE Alu 9 309 -4 998 135 14 0 chr5 170940475 170940623 -32144909 + MER4E LTR ERV1 617 766 0 203 264 0 0 chr5 170940737 170940789 -32144743 + MIR SINE MIR 97 143 -65 9969 46 7 11 chr5 170941368 170943432 -32142100 - L1PA5 LINE L1 -2 6152 4102 18984 46 12 1 chr5 170943541 170946379 -32139153 - L1PA5 LINE L1 -311 5843 2979 1278 109 6 0 chr5 170946480 170946655 -32138877 + AluSp SINE Alu 138 313 0 315 0 0 0 chr5 170946670 170946705 -32138827 + (TA)n Simple_repeat Simple_repeat 2 36 0 1717 239 87 43 chr5 170946846 170947385 -32138147 - MLT1E3 LTR MaLR 0 624 62 372 245 88 44 chr5 170947398 170947557 -32137975 - L2 LINE L2 -2817 497 332 2329 136 34 6 chr5 170948087 170948441 -32137091 - THE1B LTR MaLR 0 364 1 208 328 90 16 chr5 170949172 170949294 -32136238 + MIR SINE MIR 127 257 -5 2007 95 20 24 chr5 170949301 170949597 -32135935 + AluSg SINE Alu 1 295 -15 1239 119 6 0 chr5 170949597 170949765 -32135767 + AluSg/x SINE Alu 132 300 -10 296 261 117 9 chr5 170949800 170949911 -32135621 + L2 LINE L2 3150 3272 0 246 335 70 38 chr5 170949942 170950100 -32135432 + L3b LINE CR1 1357 1519 -64 270 252 112 48 chr5 170950193 170950303 -32135229 + MIR SINE MIR 2 120 -88 3250 35 23 2 chr5 170950325 170950721 -32134811 + L1PA4 LINE L1 5751 6154 -1 29 0 0 0 chr5 170950721 170950750 -32134782 + AT_rich Low_complexity Low_complexity 1 29 0 2339 99 0 0 chr5 170950996 170951288 -32134244 + AluSx SINE Alu 1 292 -20 189 200 25 0 chr5 170952110 170952150 -32133382 - L3 LINE CR1 -106 1471 1431 202 301 75 0 chr5 170952305 170952398 -32133134 - L3 LINE CR1 -379 1198 1099 702 257 49 90 chr5 170952468 170952787 -32132745 + L1MC4a LINE L1 5475 5777 -2031 5024 142 31 50 chr5 170952787 170953774 -32131758 + LTR5 LTR ERVK 1 969 0 702 257 49 90 chr5 170953774 170953843 -32131689 + L1MC4a LINE L1 5777 5847 -1961 369 0 0 0 chr5 170953923 170953964 -32131568 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 24 53 0 0 chr5 170954073 170954111 -32131421 + AT_rich Low_complexity Low_complexity 1 38 0 438 127 0 0 chr5 170954316 170954387 -32131145 + (TCCA)n Simple_repeat Simple_repeat 4 74 0 26 0 0 0 chr5 170954649 170954675 -32130857 + GC_rich Low_complexity Low_complexity 1 26 0 277 225 98 139 chr5 170954820 170954916 -32130616 + MIR SINE MIR 24 111 -151 745 200 17 23 chr5 170954916 170955091 -32130441 - L1MB8 LINE L1 0 6178 6005 277 225 98 139 chr5 170955091 170955167 -32130365 + MIR SINE MIR 111 189 -73 23 0 0 0 chr5 170955226 170955249 -32130283 + AT_rich Low_complexity Low_complexity 1 23 0 6644 127 19 6 chr5 170955954 170956973 -32128559 - L1MC1 LINE L1 0 6333 5302 1407 124 0 5 chr5 170956990 170957184 -32128348 - AluSg/x SINE Alu -33 279 87 1529 171 13 54 chr5 170957197 170957495 -32128037 - AluJo SINE Alu -26 286 1 331 269 131 0 chr5 170957495 170957625 -32127907 - L1MC1 LINE L1 -814 5332 5186 2245 109 0 13 chr5 170958039 170958352 -32127180 + AluSc SINE Alu 1 309 0 1828 152 13 10 chr5 170958388 170958698 -32126834 + AluJb SINE Alu 2 312 0 28 0 0 0 chr5 170958742 170958770 -32126762 + AT_rich Low_complexity Low_complexity 1 28 0 248 322 0 0 chr5 170959129 170959216 -32126316 + MIR SINE MIR 34 120 -88 229 348 51 8 chr5 170959258 170959376 -32126156 + L2 LINE L2 3187 3309 -4 1126 136 22 0 chr5 170959806 170959990 -32125542 + MER5A DNA MER1_type 2 189 0 225 365 10 0 chr5 170960192 170960288 -32125244 - MIR3 SINE MIR -52 156 60 2201 139 5 41 chr5 170960334 170960723 -32124809 - THE1C LTR MaLR 0 375 1 10054 115 9 76 chr5 170960723 170962416 -32123116 - THE1C-int LTR MaLR 0 1580 1 2165 126 15 51 chr5 170962416 170962805 -32122727 - THE1C LTR MaLR 0 375 1 2234 102 3 29 chr5 170963420 170963733 -32121799 - AluSx SINE Alu -7 305 1 387 344 76 43 chr5 170963798 170964377 -32121155 - L2 LINE L2 0 3272 2644 235 345 88 58 chr5 170965088 170965479 -32120053 + L2 LINE L2 2776 3175 -97 216 163 0 0 chr5 170965664 170965707 -32119825 + (TA)n Simple_repeat Simple_repeat 1 43 0 531 211 62 8 chr5 170966387 170966515 -32119017 - L2 LINE L2 0 3313 3179 225 0 0 0 chr5 170967727 170967752 -32117780 + (GTTTG)n Simple_repeat Simple_repeat 2 26 0 321 259 123 57 chr5 170967959 170968171 -32117361 - MLT1K LTR MaLR -175 413 188 233 309 0 0 chr5 170968396 170968451 -32117081 + MIR SINE MIR 49 103 -159 977 189 147 0 chr5 170968568 170968758 -32116774 + MER20 DNA MER1_type 1 218 -1 386 185 109 0 chr5 170969287 170969379 -32116153 - L2 LINE L2 -4 3309 3208 700 273 78 26 chr5 170969382 170969613 -32115919 + MIR SINE MIR 20 262 0 240 295 45 64 chr5 170969620 170969776 -32115756 + MER5B DNA MER1_type 12 164 -14 264 343 24 42 chr5 170969797 170969963 -32115569 + MER5A DNA MER1_type 4 166 -23 * 572 247 153 0 chr5 170969839 170969989 -32115543 - MER5A DNA MER1_type -8 181 9 1717 183 6 16 chr5 170970255 170970567 -32114965 + AluJb SINE Alu 3 311 -1 2397 95 0 22 chr5 170971068 170971385 -32114147 + AluSg SINE Alu 1 310 0 433 269 69 0 chr5 170971485 170971615 -32113917 + MIR SINE MIR 114 252 -10 267 238 25 25 chr5 170971658 170971738 -32113794 + MIR3 SINE MIR 99 178 -30 6197 71 7 35 chr5 170971911 170972761 -32112771 + LTR12 LTR ERV1 1 826 0 229 255 10 69 chr5 170973161 170973263 -32112269 + MIR SINE MIR 20 115 -147 861 257 74 67 chr5 170973532 170974038 -32111494 + L1PA16 LINE L1 2189 2645 -4939 986 169 17 12 chr5 170974044 170974216 -32111316 + AluJb SINE Alu 140 312 0 13427 193 27 28 chr5 170974224 170975879 -32109653 + L1PA16 LINE L1 2635 4289 -3315 2283 147 68 22 chr5 170975879 170976288 -32109244 - MSTA LTR MaLR 0 428 1 13427 193 27 28 chr5 170976288 170978969 -32106563 + L1PA16 LINE L1 4289 6932 -672 216 0 0 0 chr5 170978969 170978993 -32106539 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 13427 193 27 28 chr5 170978993 170979664 -32105868 + L1PA16 LINE L1 6932 7602 -2 351 259 98 0 chr5 170979668 170979811 -32105721 + MIR SINE MIR 106 262 0 291 230 27 27 chr5 170979880 170979954 -32105578 + MIR3 SINE MIR 81 154 -54 247 164 15 15 chr5 170980264 170980286 -32105246 + (TA)n Simple_repeat Simple_repeat 1 22 -45 2295 113 0 0 chr5 170980286 170980579 -32104953 + AluSx SINE Alu 10 302 -10 247 164 15 15 chr5 170980579 170980623 -32104909 + (TA)n Simple_repeat Simple_repeat 21 67 0 587 151 79 58 chr5 170980631 170980770 -32104762 + L1MC4 LINE L1 7899 8040 -2 1976 157 3 3 chr5 170981536 170981829 -32103703 - AluJb SINE Alu -19 293 1 1961 104 82 0 chr5 170981875 170982155 -32103377 - AluSq SINE Alu -6 307 5 592 283 80 17 chr5 170982716 170982953 -32102579 + MIR SINE MIR 10 261 -1 25 51 0 0 chr5 170983027 170983066 -32102466 + AT_rich Low_complexity Low_complexity 1 39 0 1682 117 43 0 chr5 170983263 170983494 -32102038 + AluSg SINE Alu 1 241 -69 2020 159 0 0 chr5 170983556 170983864 -32101668 + AluSx SINE Alu 3 310 -2 42030 60 4 5 chr5 170984107 170990271 -32095261 + L1PA5 LINE L1 2 6152 -2 220 297 14 0 chr5 170990384 170990458 -32095074 - L2 LINE L2 -338 2975 2901 213 290 82 0 chr5 170990816 170990918 -32094614 - MIR SINE MIR -65 143 32 1013 128 14 0 chr5 170990982 170991130 -32094402 - MER4E LTR ERV1 0 766 617 2167 113 3 0 chr5 170991156 170991456 -32094076 - AluSp SINE Alu -4 309 9 2340 173 35 16 chr5 170991458 170991887 -32093645 - MER4E LTR ERV1 -342 437 1 1008 180 0 0 chr5 170991917 170992078 -32093454 + FRAM SINE Alu 1 160 -16 2168 95 0 29 chr5 170993506 170993812 -32091720 + AluSg SINE Alu 1 297 -13 225 200 0 17 chr5 170993926 170993986 -32091546 + T-rich Low_complexity Low_complexity 1 59 0 352 208 212 75 chr5 170994319 170994531 -32091001 - MER102a DNA MER1_type -19 311 71 225 65 0 0 chr5 170994618 170994649 -32090883 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 339 137 0 0 chr5 170994648 170994721 -32090811 + (CA)n Simple_repeat Simple_repeat 1 73 0 430 251 264 21 chr5 170994851 170995086 -32090446 + L3 LINE CR1 1275 1566 -11 313 211 16 146 chr5 170995398 170995521 -32090011 - MIR SINE MIR -71 137 31 2443 83 0 0 chr5 170995814 170996115 -32089417 + AluSx SINE Alu 1 301 -11 784 54 0 0 chr5 170996624 170996716 -32088816 + AluY SINE Alu 2 93 -218 5089 100 37 3 chr5 170997702 170998370 -32087162 - LTR8 LTR ERV1 0 691 1 724 119 0 0 chr5 170999344 170999445 -32086087 - AluSq/x SINE Alu -172 140 40 809 243 82 24 chr5 170999452 170999793 -32085739 - L1MEc LINE L1 -2786 3640 3280 821 181 93 5 chr5 170999812 171000005 -32085527 + MER33 DNA MER1_type 19 228 -96 2326 91 7 0 chr5 171000056 171000363 -32085169 + AluSp SINE Alu 2 310 -3 4330 212 23 25 chr5 171001677 171002039 -32083493 + L1 LINE L1 2157 2518 -3628 2660 23 3 3 chr5 171002039 171002343 -32083189 + AluY SINE Alu 1 304 -7 4330 212 23 25 chr5 171002343 171002756 -32082776 + L1 LINE L1 2518 2931 -3215 2362 99 0 0 chr5 171002756 171003050 -32082482 + AluSq SINE Alu 1 294 -19 4330 212 23 25 chr5 171003050 171003369 -32082163 + L1 LINE L1 2931 3249 -2897 6914 165 72 21 chr5 171003384 171005251 -32080281 + L1P5 LINE L1 3842 5792 -364 217 184 0 0 chr5 171005251 171005273 -32080259 + (CA)n Simple_repeat Simple_repeat 2 26 -13 2527 101 33 97 chr5 171005273 171005698 -32079834 - MER48 LTR ERV1 0 398 1 217 184 0 0 chr5 171005698 171005713 -32079819 + (CA)n Simple_repeat Simple_repeat 25 39 0 851 213 27 0 chr5 171005790 171005940 -32079592 + FRAM SINE Alu 1 154 -22 972 259 96 56 chr5 171005941 171006414 -32079118 - L1MEc LINE L1 -4541 2066 1566 735 211 16 0 chr5 171006414 171006537 -32078995 - FLAM_A SINE Alu -8 125 1 972 259 96 56 chr5 171006537 171006614 -32078918 - L1MEc LINE L1 -5041 1566 1494 570 188 0 40 chr5 171006623 171006724 -32078808 - FLAM_C SINE Alu -11 132 36 868 238 35 55 chr5 171006724 171006949 -32078583 - L1MEc LINE L1 -5120 1306 1089 1641 188 3 17 chr5 171006949 171007242 -32078290 + AluJo SINE Alu 9 297 -15 868 238 35 55 chr5 171007242 171007360 -32078172 - L1MEc LINE L1 -5337 1089 970 227 204 102 23 chr5 171008293 171008381 -32077151 + L1ME4a LINE L1 6000 6094 -27 734 182 54 14 chr5 171008506 171008654 -32076878 + MER20 DNA MER1_type 1 154 -65 2147 116 20 0 chr5 171008676 171008978 -32076554 - AluSq SINE Alu -5 308 1 430 323 18 0 chr5 171009045 171009233 -32076299 - L1ME LINE L1 -338 5783 5587 2145 126 0 19 chr5 171009588 171009898 -32075634 + AluSx SINE Alu 1 304 -8 1542 180 0 19 chr5 171009908 171010175 -32075357 + AluJo SINE Alu 2 263 -49 4332 64 10 63 chr5 171011850 171012947 -32072585 + MER11A LTR ERVK 1 1266 0 310 308 42 8 chr5 171013410 171013530 -32072002 + MIR3 SINE MIR 5 128 -80 31 0 0 0 chr5 171013799 171013830 -32071702 + AT_rich Low_complexity Low_complexity 1 31 0 530 342 34 4 chr5 171013878 171014115 -32071417 - MIR SINE MIR -7 255 12 557 224 9 9 chr5 171014115 171014231 -32071301 + MIR3 SINE MIR 64 179 -29 214 356 11 33 chr5 171014472 171014562 -32070970 + MIR3 SINE MIR 10 97 -111 272 253 25 13 chr5 171014582 171014661 -32070871 + MLT1K LTR MaLR 20 99 -489 916 293 122 12 chr5 171014664 171015090 -32070442 + MLT1K LTR MaLR 2 474 -2 336 306 97 0 chr5 171015096 171015220 -32070312 + MIR3 SINE MIR 64 199 -9 871 202 7 0 chr5 171015226 171015398 -32070134 + L1MB8 LINE L1 5427 5607 -577 4969 133 23 11 chr5 171015398 171016179 -32069353 + Tigger2 DNA MER2_type 1 790 -1928 1403 178 13 0 chr5 171016195 171016426 -32069106 + L1M3f LINE L1 7 240 -5088 4026 181 40 36 chr5 171016432 171017075 -32068457 + L1M3f LINE L1 466 1105 -4953 2188 137 0 0 chr5 171017075 171017382 -32068150 + AluSx SINE Alu 1 307 -5 4026 181 40 36 chr5 171017382 171018181 -32067351 + L1M3f LINE L1 1105 1907 -4151 6489 146 25 35 chr5 171018500 171019614 -32065918 + Tigger2 DNA MER2_type 1616 2718 0 22 56 0 0 chr5 171019636 171019672 -32065860 + AT_rich Low_complexity Low_complexity 1 36 0 2079 221 25 65 chr5 171019672 171020283 -32065249 + L1MB8 LINE L1 5591 6176 -2 2590 53 0 9 chr5 171020759 171021077 -32064455 - AluYb8 SINE Alu -3 315 1 1058 194 0 50 chr5 171021079 171021301 -32064231 - AluJo SINE Alu -17 295 85 235 281 234 0 chr5 171021572 171021700 -32063832 + MIR3 SINE MIR 30 187 -21 241 336 0 18 chr5 171021918 171021958 -32063574 + GA-rich Low_complexity Low_complexity 2 41 -71 2786 169 40 11 chr5 171021958 171022486 -32063046 + L1MB2 LINE L1 5629 6171 0 241 336 0 18 chr5 171022486 171022558 -32062974 + GA-rich Low_complexity Low_complexity 41 112 0 245 188 62 47 chr5 171022644 171022708 -32062824 + Charlie8 DNA MER1_type 26 90 -2327 1896 151 13 10 chr5 171023258 171023556 -32061976 - AluJb SINE Alu -5 307 9 420 305 43 37 chr5 171023667 171023827 -32061705 - MIR SINE MIR -63 145 15 183 80 0 0 chr5 171024195 171024220 -32061312 + (TC)n Simple_repeat Simple_repeat 1 25 0 358 280 53 8 chr5 171024276 171024408 -32061124 + MIR3 SINE MIR 30 167 -41 195 231 0 0 chr5 171024444 171024483 -32061049 + L2 LINE L2 3271 3309 -4 546 330 43 31 chr5 171024619 171024943 -32060589 + L1ME4a LINE L1 2 329 -6211 675 272 114 0 chr5 171025166 171025324 -32060208 - MER45A DNA AcHobo 0 178 3 335 348 72 22 chr5 171025440 171025621 -32059911 + L1ME4a LINE L1 746 935 -5595 2973 250 88 30 chr5 171025671 171026260 -32059272 + L1ME4a LINE L1 908 1461 -5079 1129 196 4 109 chr5 171026260 171026526 -32059006 - MER8 DNA MER2_type 0 239 2 2973 250 88 30 chr5 171026526 171027391 -32058141 + L1ME4a LINE L1 1461 2422 -4118 2481 177 19 129 chr5 171027381 171027752 -32057780 + L1ME4a LINE L1 5135 5545 -995 * 1786 159 16 25 chr5 171027752 171028067 -32057465 - AluJo SINE Alu 0 312 1 2481 177 19 129 chr5 171028067 171028198 -32057334 + L1ME4a LINE L1 5545 5689 -851 552 242 0 65 chr5 171028198 171028322 -32057210 + FLAM_A SINE Alu 1 116 -17 2152 130 0 0 chr5 171028323 171028616 -32056916 - AluSx SINE Alu -19 293 1 2481 177 19 129 chr5 171028616 171028855 -32056677 + L1ME4a LINE L1 5688 5797 -743 1189 247 30 7 chr5 171028832 171029136 -32056396 + L1ME1 LINE L1 6048 6358 -202 * 234 320 48 0 chr5 171029140 171029243 -32056289 + L1ME1 LINE L1 6436 6543 -17 1940 89 93 0 chr5 171030032 171030302 -32055230 + AluSg SINE Alu 1 295 -15 2144 103 0 3 chr5 171030857 171031178 -32054354 + AluSx SINE Alu 1 312 0 1832 125 96 0 chr5 171032198 171032470 -32053062 + AluSx SINE Alu 2 299 -13 189 0 0 0 chr5 171032910 171032931 -32052601 + (T)n Simple_repeat Simple_repeat 1 21 0 429 255 36 21 chr5 171033003 171033145 -32052387 - MER20B DNA MER1_type -19 200 54 634 265 129 11 chr5 171034037 171034324 -32051208 + L1ME4a LINE L1 5955 6275 -240 620 292 101 9 chr5 171034383 171034602 -32050930 + MIR SINE MIR 3 241 -21 184 179 90 60 chr5 171034754 171034821 -32050711 + L3b LINE CR1 1334 1402 -181 1819 174 13 7 chr5 171034846 171035151 -32050381 + AluJo SINE Alu 1 307 -5 231 213 164 57 chr5 171035340 171035462 -32050070 - MIR3 SINE MIR -4 204 70 2096 122 17 0 chr5 171035765 171036059 -32049473 - AluSp SINE Alu -14 299 1 292 250 58 39 chr5 171036250 171036354 -32049178 - L2 LINE L2 -32 3281 3176 269 238 12 0 chr5 171036497 171036577 -32048955 + GA-rich Low_complexity Low_complexity 4 84 0 6679 127 19 6 chr5 171036732 171037751 -32047781 - L1MC1 LINE L1 0 6333 5302 1394 124 0 5 chr5 171037768 171037962 -32047570 - AluSg/x SINE Alu -33 279 87 1514 171 13 54 chr5 171037975 171038273 -32047259 - AluJo SINE Alu -26 286 1 341 269 131 0 chr5 171038273 171038403 -32047129 - L1MC1 LINE L1 -814 5332 5186 2196 108 0 16 chr5 171038817 171039131 -32046401 + AluSc SINE Alu 1 309 0 1828 163 16 3 chr5 171039167 171039474 -32046058 + AluJb SINE Alu 2 312 0 443 62 0 16 chr5 171039474 171039538 -32045994 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 2418 71 7 10 chr5 171039539 171039847 -32045685 + AluY SINE Alu 5 311 0 28 0 0 0 chr5 171039891 171039919 -32045613 + AT_rich Low_complexity Low_complexity 1 28 0 284 339 26 9 chr5 171040251 171040366 -32045166 + MIR3 SINE MIR 4 120 -88 260 314 59 17 chr5 171040408 171040526 -32045006 + L2 LINE L2 3187 3309 -4 1218 141 16 0 chr5 171040955 171041140 -32044392 + MER5A DNA MER1_type 2 189 0 245 315 21 12 chr5 171041343 171041454 -32044078 - MIR3 SINE MIR -52 156 45 2340 139 5 41 chr5 171041485 171041874 -32043658 - THE1C LTR MaLR 0 375 1 842 120 9 34 chr5 171041879 171042044 -32043488 - THE1C-int LTR MaLR -7 1573 1432 23 55 0 18 chr5 171042169 171042187 -32043345 + AT_rich Low_complexity Low_complexity 1 18 -36 2271 100 3 22 chr5 171042187 171042506 -32043026 - AluSq SINE Alu 0 313 1 23 55 0 18 chr5 171042506 171042542 -32042990 + AT_rich Low_complexity Low_complexity 18 54 0 380 293 83 76 chr5 171042923 171043516 -32042016 + L1MEd LINE L1 772 1368 -5004 1595 185 40 28 chr5 171043542 171043866 -32041666 + MLT1A1 LTR MaLR 38 365 0 527 236 174 70 chr5 171043877 171044389 -32041143 + L1MEd LINE L1 1266 1979 -4584 219 287 32 0 chr5 171044626 171044720 -32040812 + A-rich Low_complexity Low_complexity 2 98 0 259 275 53 8 chr5 171044783 171044914 -32040618 + L1MEd LINE L1 2446 2582 -3800 198 308 0 15 chr5 171044938 171045003 -32040529 - MIR SINE MIR -7 255 192 1022 201 133 32 chr5 171045031 171045280 -32040252 - L1ME2 LINE L1 -10 6154 5881 301 294 12 0 chr5 171045508 171045593 -32039939 + MIR3 SINE MIR 84 169 -39 231 312 199 7 chr5 171045707 171045848 -32039684 - MIR3 SINE MIR -21 187 20 2323 161 145 7 chr5 171046645 171047087 -32038445 - MLT1D LTR MaLR -2 503 1 448 268 32 8 chr5 171047087 171047210 -32038322 - MER94 DNA DNA -8 126 1 1819 136 92 50 chr5 171047880 171048240 -32037292 - THE1C LTR MaLR 0 375 1 2124 128 7 3 chr5 171048298 171048604 -32036928 + AluSc SINE Alu 1 307 -2 304 179 48 36 chr5 171049093 171049177 -32036355 - LTR16A1 LTR ERVL -370 87 3 207 254 179 0 chr5 171049179 171049246 -32036286 + MIR SINE MIR 160 238 -24 195 282 57 81 chr5 171049620 171049744 -32035788 - MIR SINE MIR -70 192 72 959 167 61 11 chr5 171049869 171050049 -32035483 - MER5A DNA MER1_type 0 189 1 830 190 70 0 chr5 171050083 171050241 -32035291 + FRAM SINE Alu 6 174 -2 676 218 28 0 chr5 171050692 171050834 -32034698 - L1MA10 LINE L1 -14 6320 6175 307 188 123 113 chr5 171050836 171051040 -32034492 - L1ME1 LINE L1 -153 6030 5826 13213 193 24 37 chr5 171051062 171051303 -32034229 - L1MA9 LINE L1 0 6291 6048 1766 123 103 0 chr5 171051303 171051605 -32033927 - L1MA5A LINE L1 -5 6292 5960 13213 193 24 37 chr5 171051605 171053414 -32032118 - L1MA9 LINE L1 -243 6048 4218 2073 119 20 7 chr5 171053414 171053707 -32031825 - AluSx SINE Alu -15 297 1 13213 193 24 37 chr5 171053707 171055172 -32030360 - L1MA9 LINE L1 -2073 4218 2867 2201 115 7 0 chr5 171055172 171055467 -32030065 + AluSq SINE Alu 1 297 -16 13213 193 24 37 chr5 171055467 171055978 -32029554 - L1MA9 LINE L1 -3424 2867 2351 394 298 15 76 chr5 171057062 171057260 -32028272 - MIR3 SINE MIR -20 188 3 254 271 213 13 chr5 171057648 171057803 -32027729 + MIR3 SINE MIR 2 187 -21 848 147 0 37 chr5 171057840 171057976 -32027556 - FLAM_C SINE Alu -2 131 1 597 305 88 27 chr5 171058513 171058808 -32026724 + L3 LINE CR1 1263 1575 -2 874 175 0 0 chr5 171060135 171060278 -32025254 - FLAM_C SINE Alu 0 143 1 521 279 42 6 chr5 171060526 171060691 -32024841 - MIR SINE MIR -15 247 77 269 370 26 31 chr5 171060813 171061005 -32024527 + MIR3 SINE MIR 17 207 -1 2044 131 0 3 chr5 171061527 171061825 -32023707 + AluSx SINE Alu 16 312 0 2141 112 0 7 chr5 171061845 171062130 -32023402 + AluSq SINE Alu 1 283 -30 265 24 48 0 chr5 171062134 171062176 -32023356 + (TAAAA)n Simple_repeat Simple_repeat 3 46 0 772 236 81 20 chr5 171062227 171062450 -32023082 - MER33 DNA MER1_type -268 56 1 209 309 0 60 chr5 171062506 171062590 -32022942 - MIR3 SINE MIR -6 202 124 49 18 0 0 chr5 171062769 171062825 -32022707 + AT_rich Low_complexity Low_complexity 1 56 0 216 0 0 0 chr5 171063009 171063033 -32022499 + (T)n Simple_repeat Simple_repeat 1 24 0 1010 294 93 21 chr5 171063394 171063636 -32021896 - L3 LINE CR1 -59 1518 1295 1782 10 0 5 chr5 171063636 171063831 -32021701 - AluY SINE Alu -10 301 108 1010 294 93 21 chr5 171063831 171064006 -32021526 - L3 LINE CR1 -282 1295 1071 344 271 0 123 chr5 171064173 171064328 -32021204 - L3 LINE CR1 -581 996 861 1276 223 62 43 chr5 171064567 171065032 -32020500 - LTR56 LTR ERV1 0 437 1 913 135 0 23 chr5 171065101 171065234 -32020298 - FLAM_C SINE Alu -2 131 2 208 315 182 14 chr5 171065258 171065401 -32020131 - MIR3 SINE MIR -3 205 39 306 276 138 7 chr5 171066130 171066282 -32019250 + MIR3 SINE MIR 31 202 -6 2510 70 3 0 chr5 171066763 171067075 -32018457 - AluSp SINE Alu 0 313 1 228 192 77 0 chr5 171067192 171067270 -32018262 + Charlie7 DNA MER1_type 2471 2554 -58 1674 153 34 37 chr5 171069932 171070227 -32015305 - AluJo SINE Alu -18 294 1 3809 184 71 32 chr5 171070456 171071303 -32014229 + Charlie1a DNA MER1_type 11 890 -565 2421 80 7 3 chr5 171071303 171071603 -32013929 - AluSc SINE Alu -8 301 1 26 0 0 0 chr5 171071720 171071746 -32013786 + AT_rich Low_complexity Low_complexity 1 26 0 2155 126 3 0 chr5 171071821 171072115 -32013417 - AluSx SINE Alu -17 295 1 622 214 220 0 chr5 171072264 171072437 -32013095 + MIR SINE MIR 5 215 -47 565 226 65 0 chr5 171072726 171072850 -32012682 - L2 LINE L2 0 3313 3182 439 335 21 16 chr5 171074185 171074379 -32011153 + MIR3 SINE MIR 3 197 -11 233 197 15 0 chr5 171075085 171075151 -32010381 + CT-rich Low_complexity Low_complexity 3 69 0 577 264 104 13 chr5 171075282 171075513 -32010019 - L1MC4a LINE L1 -1841 5967 5716 824 156 0 15 chr5 171075928 171076063 -32009469 + L1PB4 LINE L1 6022 6154 -2 1927 122 24 10 chr5 171076917 171077205 -32008327 + AluSx SINE Alu 1 292 -20 522 120 66 6 chr5 171077206 171077373 -32008159 + (TA)n Simple_repeat Simple_repeat 2 178 0 1166 120 27 11 chr5 171077467 171077651 -32007881 - MER20 DNA MER1_type -17 202 16 22 0 0 0 chr5 171077758 171077780 -32007752 + AT_rich Low_complexity Low_complexity 1 22 0 379 265 70 50 chr5 171078425 171078723 -32006809 - L1ME LINE L1 -345 5776 5473 24 67 0 0 chr5 171078745 171078790 -32006742 + AT_rich Low_complexity Low_complexity 1 45 0 329 235 0 39 chr5 171079428 171079530 -32006002 + MER117 DNA MER1_type 66 163 -34 1021 161 124 5 chr5 171080046 171080232 -32005300 - MER6B DNA MER2_type -2 208 1 24 0 0 0 chr5 171080657 171080681 -32004851 + AT_rich Low_complexity Low_complexity 1 24 0 3521 70 36 16 chr5 171081016 171081460 -32004072 - MLT2A2 LTR ERVL 0 453 1 28 0 0 0 chr5 171081741 171081769 -32003763 + AT_rich Low_complexity Low_complexity 1 28 0 1854 132 0 24 chr5 171081844 171082133 -32003399 + AluSx SINE Alu 1 282 -30 468 0 0 0 chr5 171082133 171082185 -32003347 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 2422 98 0 0 chr5 171082843 171083149 -32002383 + AluSx SINE Alu 1 306 -6 709 257 91 25 chr5 171083310 171083551 -32001981 + MIR SINE MIR 6 262 0 222 128 0 0 chr5 171086383 171086422 -31999110 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 761 208 0 0 chr5 171086424 171086544 -31998988 - 5S rRNA rRNA -1 120 1 558 165 9 28 chr5 171086585 171086694 -31998838 - L1MA5 LINE L1 -6 6294 6188 737 292 65 15 chr5 171087989 171088249 -31997283 - L1MC/D LINE L1 -2017 5791 5519 335 278 56 0 chr5 171091268 171091358 -31994174 + MIR3 SINE MIR 109 203 -5 1672 85 0 18 chr5 171091810 171092033 -31993499 + AluY SINE Alu 93 311 0 430 254 67 30 chr5 171093513 171093647 -31991885 - MIR3 SINE MIR -14 194 56 311 331 158 0 chr5 171093705 171093839 -31991693 - MIR SINE MIR -48 160 7 719 191 105 0 chr5 171094769 171094931 -31990601 + MER3 DNA MER1_type 31 209 0 2291 116 151 5 chr5 171094979 171095351 -31990181 - MSTB LTR MaLR 0 426 1 714 289 29 0 chr5 171095887 171096091 -31989441 - MIR SINE MIR -25 237 28 429 296 145 0 chr5 171096701 171096860 -31988672 + MIR3 SINE MIR 16 197 -11 184 296 41 31 chr5 171098390 171098488 -31987044 - L2 LINE L2 -4 3268 3170 225 178 0 0 chr5 171098744 171098789 -31986743 + (TG)n Simple_repeat Simple_repeat 2 46 0 1479 157 120 10 chr5 171101638 171101937 -31983595 + MLT2C1 LTR ERVL 3 334 -63 254 200 0 0 chr5 171101991 171102041 -31983491 + MLT2C1 LTR ERVL 464 513 -7 1363 206 83 74 chr5 171102140 171102547 -31982985 - MER21B LTR ERV1 0 863 453 279 373 22 0 chr5 171102596 171102730 -31982802 - MIR SINE MIR -106 156 20 1923 180 36 30 chr5 171103270 171103709 -31981823 - L1ME1 LINE L1 -10 6156 5715 849 177 17 11 chr5 171103709 171103890 -31981642 + LTR23 LTR ERV1 223 404 -33 1771 203 100 0 chr5 171103901 171104310 -31981222 - L1ME1 LINE L1 -447 5719 5270 * 3161 208 41 34 chr5 171104287 171105022 -31980510 - L1MD2 LINE L1 0 6359 5616 1988 107 79 59 chr5 171105022 171105378 -31980154 + THE1B LTR MaLR 1 363 -1 3161 208 41 34 chr5 171105378 171105518 -31980014 - L1MD2 LINE L1 -743 5616 5478 1760 124 4 0 chr5 171105524 171105766 -31979766 - AluSx SINE Alu -12 300 58 2117 229 76 16 chr5 171105806 171106447 -31979085 - L1MD2 LINE L1 -1708 4438 3759 919 162 50 0 chr5 171106630 171106809 -31978723 - MER20 DNA MER1_type 0 219 32 2527 79 3 0 chr5 171106908 171107213 -31978319 - AluSq SINE Alu -7 306 1 557 246 133 33 chr5 171107319 171107548 -31977984 - MIR SINE MIR -8 254 1 184 343 148 33 chr5 171108807 171109166 -31976366 - L3 LINE CR1 -353 1224 825 * 657 175 58 156 chr5 171109159 171109332 -31976200 + MIR SINE MIR 17 160 -102 2354 88 0 0 chr5 171109332 171109642 -31975890 - AluSx SINE Alu 0 310 1 657 175 58 156 chr5 171109642 171109724 -31975808 + MIR SINE MIR 160 248 -14 215 306 113 24 chr5 171110024 171110148 -31975384 + MIR3 SINE MIR 29 163 -45 721 97 11 0 chr5 171110461 171110554 -31974978 - AluS SINE Alu -217 95 2 3746 172 81 9 chr5 171110701 171111004 -31974528 + L1MC1 LINE L1 4850 5130 -1203 2274 106 7 10 chr5 171111004 171111305 -31974227 + AluSx SINE Alu 1 300 -12 3746 172 81 9 chr5 171111305 171112374 -31973158 + L1MC1 LINE L1 5130 6333 0 244 292 0 31 chr5 171112376 171112441 -31973091 - MIR SINE MIR -94 114 52 323 213 88 0 chr5 171112846 171112926 -31972606 - MER5A DNA MER1_type -22 167 81 216 216 39 0 chr5 171112951 171113002 -31972530 + MIR3 SINE MIR 149 201 -7 251 305 0 0 chr5 171113921 171113980 -31971552 + L2 LINE L2 3194 3252 -20 388 289 7 37 chr5 171115473 171115608 -31969924 + MIR3 SINE MIR 6 136 -72 2164 131 0 0 chr5 171117399 171117696 -31967836 + AluSx SINE Alu 1 297 -15 320 219 27 0 chr5 171117722 171117795 -31967737 + MIR3 SINE MIR 86 160 -48 357 241 53 11 chr5 171117826 171117967 -31967565 - MER5A DNA MER1_type -28 150 5 433 294 43 65 chr5 171118168 171118352 -31967180 - MER5A DNA MER1_type 0 189 10 3229 103 87 30 chr5 171118358 171118853 -31966679 + MER1A DNA MER1_type 5 527 0 284 341 49 37 chr5 171119234 171119398 -31966134 - L2 LINE L2 -3 3269 3104 * 653 253 91 83 chr5 171119392 171119645 -31965887 - MIR SINE MIR -1 261 7 677 283 108 29 chr5 171119719 171120194 -31965338 - L2 LINE L2 -247 3025 2506 328 341 69 56 chr5 171120389 171120804 -31964728 + L1ME3A LINE L1 5587 6008 -156 269 191 64 100 chr5 171121733 171121843 -31963689 - MIR SINE MIR -47 215 110 1987 147 93 39 chr5 171121991 171122249 -31963283 + Charlie1b DNA MER1_type 37 280 -2481 3143 144 6 0 chr5 171122249 171122736 -31962796 + L1PA15 LINE L1 5675 6164 -1 1987 147 93 39 chr5 171122736 171122939 -31962593 + Charlie1b DNA MER1_type 280 523 0 310 269 20 7 chr5 171123056 171123247 -31962285 + MER113 DNA MER1_type? 1 243 -278 5813 254 107 26 chr5 171123264 171125200 -31960332 + L2 LINE L2 938 3093 -220 1962 147 7 23 chr5 171125200 171125507 -31960025 + AluSx SINE Alu 1 302 -10 5813 254 107 26 chr5 171125507 171125747 -31959785 + L2 LINE L2 3093 3312 -1 320 229 38 89 chr5 171125766 171125795 -31959737 + MER113 DNA MER1_type? 290 319 -202 2337 110 0 7 chr5 171125795 171126104 -31959428 + AluSx SINE Alu 1 307 -5 320 229 38 89 chr5 171126104 171126231 -31959301 + MER113 DNA MER1_type? 319 438 -83 1670 154 0 72 chr5 171127022 171127367 -31958165 + AluJo SINE Alu 3 312 0 2297 114 0 0 chr5 171128033 171128332 -31957200 + AluSx SINE Alu 1 299 -13 327 292 57 2 chr5 171128416 171128551 -31956981 - MER5A DNA MER1_type 0 178 38 608 247 22 22 chr5 171128556 171128734 -31956798 + L1ME3A LINE L1 5993 6170 0 353 302 16 31 chr5 171128825 171128954 -31956578 + MER5A DNA MER1_type 63 189 0 283 348 148 9 chr5 171129290 171129500 -31956032 + MIR SINE MIR 8 246 -16 696 332 15 23 chr5 171129517 171129776 -31955756 - MIR SINE MIR 0 262 6 600 246 214 19 chr5 171129796 171130011 -31955521 - MIR SINE MIR -2 260 4 333 244 227 17 chr5 171131637 171131813 -31953719 - L2 LINE L2 -246 3067 2855 545 258 84 26 chr5 171132440 171132630 -31952902 - MIR SINE MIR -42 220 20 845 304 173 22 chr5 171132775 171133331 -31952201 + L2 LINE L2 2160 2799 -515 271 211 23 120 chr5 171133344 171133421 -31952111 - MER94 DNA DNA -12 122 62 1239 187 224 3 chr5 171133421 171133720 -31951812 + MLT1A1 LTR MaLR 1 365 0 271 211 23 120 chr5 171133720 171133775 -31951757 - MER94 DNA DNA -72 62 3 656 302 187 16 chr5 171133787 171134214 -31951318 + L2 LINE L2 2804 3303 -10 763 273 61 22 chr5 171134552 171134783 -31950749 + MIR SINE MIR 13 252 -10 228 271 281 0 chr5 171135286 171135382 -31950150 - MIR3 SINE MIR -3 205 83 307 224 40 0 chr5 171135655 171135731 -31949801 + MLT1L LTR MaLR 4 82 -533 555 250 138 46 chr5 171135972 171136168 -31949364 + MIR SINE MIR 12 225 -37 541 317 125 9 chr5 171136612 171136836 -31948696 + MIR SINE MIR 10 259 -3 257 324 218 44 chr5 171137420 171137787 -31947745 - L2 LINE L2 -1 3271 2841 413 258 15 37 chr5 171138773 171138923 -31946609 - MIR SINE MIR -66 196 54 312 169 68 194 chr5 171138957 171139235 -31946297 + L1MC5 LINE L1 6991 7233 -728 1059 280 95 30 chr5 171139398 171140027 -31945505 + L1MC5 LINE L1 7256 7925 -36 885 233 25 69 chr5 171141385 171141488 -31944044 + L1MD2 LINE L1 6043 6149 -210 279 54 0 0 chr5 171141488 171141525 -31944007 + (CA)n Simple_repeat Simple_repeat 2 38 0 885 233 25 69 chr5 171141525 171141739 -31943793 + L1MD2 LINE L1 6149 6346 -13 185 161 0 0 chr5 171142099 171142130 -31943402 + L3 LINE CR1 1049 1079 -498 401 283 110 0 chr5 171142276 171142421 -31943111 + L3 LINE CR1 1400 1560 -17 396 0 0 0 chr5 171142497 171142541 -31942991 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 307 178 30 chr5 171142563 171142664 -31942868 + L2 LINE L2 2933 3048 -265 325 236 0 100 chr5 171142818 171142928 -31942604 - L1MC4 LINE L1 -1339 6703 6605 600 245 51 23 chr5 171143980 171144074 -31941458 + L1ME4a LINE L1 5545 5635 -486 264 59 0 0 chr5 171144074 171144108 -31941424 + (TA)n Simple_repeat Simple_repeat 2 35 0 600 245 51 23 chr5 171144108 171144264 -31941268 + L1ME4a LINE L1 5635 5806 -315 1300 152 58 31 chr5 171144264 171144521 -31941011 + MER21A LTR ERV1 1 264 -667 3326 147 47 13 chr5 171144526 171145064 -31940468 + MER21A LTR ERV1 376 931 0 273 259 140 38 chr5 171145097 171145333 -31940199 + L1ME4a LINE L1 5862 6121 0 229 335 69 28 chr5 171145949 171146167 -31939365 + L2 LINE L2 2810 3036 -236 381 191 7 13 chr5 171146255 171146411 -31939121 + GA-rich Low_complexity Low_complexity 1 154 0 315 205 205 9 chr5 171146412 171146524 -31939008 + L1MCa LINE L1 1167 1300 -5126 291 157 0 0 chr5 171146524 171146575 -31938957 + GA-rich Low_complexity Low_complexity 5 55 0 23 33 0 0 chr5 171146595 171146625 -31938907 + AT_rich Low_complexity Low_complexity 1 30 0 261 281 184 35 chr5 171146688 171146802 -31938730 + L2 LINE L2 3183 3313 0 216 226 0 0 chr5 171147172 171147234 -31938298 + GA-rich Low_complexity Low_complexity 2 63 0 1991 103 3 30 chr5 171147770 171148072 -31937460 - AluSx SINE Alu -1 311 18 307 309 17 28 chr5 171148433 171148671 -31936861 + (TATG)n Simple_repeat Simple_repeat 1 235 0 351 293 0 43 chr5 171149442 171149630 -31935902 + CT-rich Low_complexity Low_complexity 1 180 0 274 222 205 26 chr5 171150106 171150223 -31935309 + L3 LINE CR1 1273 1410 -167 333 276 41 10 chr5 171150818 171150916 -31934616 + MIR SINE MIR 51 151 -57 515 272 56 41 chr5 171151122 171151317 -31934215 - MIR SINE MIR -16 246 49 883 148 43 6 chr5 171155827 171155989 -31929543 - FRAM SINE Alu -16 160 1 1111 250 53 39 chr5 171156068 171156580 -31928952 + MER113 DNA MER1_type? 3 521 0 427 240 190 23 chr5 171156846 171157067 -31928465 + L1ME4a LINE L1 5861 6118 -3 250 132 0 66 chr5 171157390 171157466 -31928066 + (TTA)n Simple_repeat Simple_repeat 1 71 0 2265 89 0 0 chr5 171157591 171157884 -31927648 - AluSx SINE Alu -19 293 1 259 295 39 0 chr5 171157885 171157963 -31927569 - MIR SINE MIR -59 203 123 488 228 0 10 chr5 171158936 171159037 -31926495 + MER103 DNA DNA 1 100 -66 367 310 37 37 chr5 171159054 171159190 -31926342 + MIR3 SINE MIR 16 154 -54 745 219 61 0 chr5 171159190 171159354 -31926178 + MER96 DNA MER1_type 1 174 -1 367 310 37 37 chr5 171159354 171159404 -31926128 + MIR3 SINE MIR 153 202 -6 601 193 17 8 chr5 171160000 171160119 -31925413 + L2 LINE L2 3151 3270 -2 305 325 95 18 chr5 171160909 171161078 -31924454 + L1ME4a LINE L1 5739 5920 -201 288 0 0 0 chr5 171161080 171161112 -31924420 + (TG)n Simple_repeat Simple_repeat 2 33 0 386 167 9 70 chr5 171161116 171161230 -31924302 + L1ME4a LINE L1 5965 6071 -50 800 183 21 0 chr5 171161240 171161382 -31924150 - FRAM SINE Alu -31 145 1 314 336 53 8 chr5 171162601 171162732 -31922800 - L2 LINE L2 -2 3311 3175 700 276 56 20 chr5 171162823 171163073 -31922459 - MIR SINE MIR -2 260 2 434 276 130 2 chr5 171163092 171163226 -31922306 - MIR SINE MIR -62 146 6 2238 95 3 0 chr5 171164461 171164766 -31920766 - AluSx SINE Alu -6 306 1 276 320 62 10 chr5 171165037 171165134 -31920398 + MIR SINE MIR 19 120 -88 337 291 55 0 chr5 171165154 171165264 -31920268 - MER117 DNA MER1_type -7 190 75 1806 158 21 63 chr5 171165624 171166003 -31919529 + MER47A DNA MER2_type 2 364 -2 984 317 101 2 chr5 171166430 171166856 -31918676 + MLT1K LTR MaLR 114 581 -7 1975 101 31 11 chr5 171167432 171167718 -31917814 + AluSx SINE Alu 3 294 -18 386 277 28 11 chr5 171168605 171168782 -31916750 + CT-rich Low_complexity Low_complexity 1 180 0 700 250 36 45 chr5 171169291 171169511 -31916021 - MIR SINE MIR -3 259 42 595 318 90 43 chr5 171169963 171170479 -31915053 - L2 LINE L2 0 3313 2777 1763 182 0 0 chr5 171170479 171170787 -31914745 - AluJb SINE Alu -4 308 1 595 318 90 43 chr5 171170787 171170845 -31914687 - L2 LINE L2 -536 2777 2723 587 271 37 88 chr5 171171555 171171883 -31913649 - MER102b DNA MER1_type -30 311 1 883 166 38 0 chr5 171172222 171172379 -31913153 - MER5A DNA MER1_type -24 165 3 261 275 14 0 chr5 171172884 171172953 -31912579 + MER103 DNA DNA 15 84 -82 253 274 151 0 chr5 171173235 171173308 -31912224 - L2 LINE L2 -1 3312 3229 415 294 84 8 chr5 171173405 171173524 -31912008 - MIR3 SINE MIR -71 137 10 231 317 40 30 chr5 171173638 171173739 -31911793 + L2 LINE L2 3188 3289 -24 322 299 0 11 chr5 171173797 171173884 -31911648 + L1MC4a LINE L1 5559 5644 -2164 2067 117 0 7 chr5 171173887 171174186 -31911346 + AluSx SINE Alu 1 297 -15 341 286 177 44 chr5 171174226 171174474 -31911058 + L1MC4a LINE L1 5766 6046 -1762 30 0 0 0 chr5 171174483 171174513 -31911019 + AT_rich Low_complexity Low_complexity 1 30 0 192 200 0 0 chr5 171174546 171174586 -31910946 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 1225 168 14 27 chr5 171178106 171178267 -31907265 + MER20 DNA MER1_type 3 162 -57 2678 113 0 0 chr5 171178267 171178631 -31906901 - THE1B LTR MaLR 0 364 1 1225 168 14 27 chr5 171178631 171178689 -31906843 + MER20 DNA MER1_type 162 219 0 843 310 8 8 chr5 171178947 171179208 -31906324 + MIR SINE MIR 2 262 0 233 240 93 78 chr5 171179203 171179332 -31906200 - MIR3 SINE MIR -69 139 9 * 291 270 38 94 chr5 171179398 171179557 -31905975 - MIR3 SINE MIR -11 197 48 891 259 217 10 chr5 171180890 171181397 -31904135 + L2 LINE L2 2694 3313 0 298 320 98 16 chr5 171181414 171181536 -31903996 - MIR3 SINE MIR -9 199 68 776 285 12 44 chr5 171181564 171181813 -31903719 + MIR SINE MIR 20 260 -2 352 277 250 7 chr5 171182257 171182405 -31903127 + MIR SINE MIR 77 260 -2 310 359 81 20 chr5 171182414 171182470 -31903062 - L3 LINE CR1 -609 968 917 2104 117 0 0 chr5 171182470 171182770 -31902762 + AluSc SINE Alu 1 300 -9 310 359 81 20 chr5 171182770 171182911 -31902621 - L3 LINE CR1 -660 917 759 459 261 89 49 chr5 171183452 171183655 -31901877 + MIR SINE MIR 3 213 -49 253 309 52 31 chr5 171183736 171183833 -31901699 + L2 LINE L2 3168 3266 -6 2243 60 18 0 chr5 171183943 171184227 -31901305 + AluY SINE Alu 1 289 -22 1669 143 0 18 chr5 171184237 171184517 -31901015 + AluJb SINE Alu 38 312 0 202 216 0 0 chr5 171184576 171184613 -31900919 + (CATA)n Simple_repeat Simple_repeat 2 38 0 351 289 41 81 chr5 171184855 171185054 -31900478 - MIR3 SINE MIR -43 165 17 655 222 8 8 chr5 171185312 171185438 -31900094 - FLAM_A SINE Alu -7 126 1 2153 97 17 0 chr5 171186213 171186511 -31899021 - AluSx SINE Alu -9 303 1 630 226 66 6 chr5 171186531 171186707 -31898825 - MIR SINE MIR -41 221 34 744 289 73 29 chr5 171186725 171186971 -31898561 - MIR SINE MIR 0 262 6 1650 138 49 23 chr5 171187075 171187379 -31898153 - AluSx SINE Alu 0 312 1 657 203 36 7 chr5 171187953 171188091 -31897441 + MIR3 SINE MIR 66 207 -1 376 266 129 52 chr5 171189354 171189602 -31895930 - L1ME2 LINE L1 -283 5881 5615 313 48 0 24 chr5 171189603 171189645 -31895887 - LTR33A LTR ERVL -1 522 482 2509 209 24 14 chr5 171189649 171190203 -31895329 - L1MD2 LINE L1 -2 6357 5799 1003 263 121 43 chr5 171190210 171190606 -31894926 - LTR33A LTR ERVL -95 428 2 705 263 61 16 chr5 171190626 171191034 -31894498 - L1MD2 LINE L1 -551 5613 5191 631 190 108 20 chr5 171191054 171191169 -31894363 - MER20B DNA MER1_type -66 717 613 2066 123 0 3 chr5 171191169 171191478 -31894054 + AluSx SINE Alu 1 308 -4 631 190 108 20 chr5 171191478 171191557 -31893975 - MER20B DNA MER1_type -170 613 506 610 223 166 0 chr5 171192305 171192480 -31893052 - MER20B DNA MER1_type -289 494 291 829 201 23 0 chr5 171192485 171192659 -31892873 + AluJo SINE Alu 127 304 -8 456 257 0 9 chr5 171192729 171192834 -31892698 - MER20B DNA MER1_type -584 199 96 204 286 0 0 chr5 171193017 171193066 -31892466 - MIR SINE MIR -65 143 95 210 256 23 116 chr5 171193281 171193367 -31892165 + MIR SINE MIR 38 115 -93 21 57 0 0 chr5 171193485 171193520 -31892012 + AT_rich Low_complexity Low_complexity 1 35 0 1741 158 13 7 chr5 171193581 171193891 -31891641 - AluJb SINE Alu 0 312 1 1939 108 0 24 chr5 171193924 171194063 -31891469 + AluSx SINE Alu 1 131 -181 2142 105 0 7 chr5 171194063 171194367 -31891165 + AluSq SINE Alu 3 304 -9 1939 108 0 24 chr5 171194367 171194514 -31891018 + AluSx SINE Alu 131 280 -32 189 0 0 0 chr5 171194514 171194535 -31890997 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 561 332 48 35 chr5 171194550 171194863 -31890669 - L1MC4a LINE L1 -1959 5849 5533 233 238 38 86 chr5 171194895 171194952 -31890580 + MIR3 SINE MIR 92 143 -65 1717 163 10 20 chr5 171194952 171195236 -31890296 + AluJo SINE Alu 2 284 -28 208 0 0 0 chr5 171195236 171195259 -31890273 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 233 238 38 86 chr5 171195268 171195315 -31890217 + MIR3 SINE MIR 143 191 -17 856 200 13 0 chr5 171195479 171195629 -31889903 - FAM SINE Alu -33 152 1 839 281 5 14 chr5 171195656 171195873 -31889659 + MIR SINE MIR 48 262 0 737 305 100 7 chr5 171195916 171196185 -31889347 + L3 LINE CR1 1281 1574 -3 188 246 35 35 chr5 171196493 171196550 -31888982 - MIR SINE MIR 0 262 206 271 228 18 0 chr5 171196750 171196807 -31888725 - MER103 DNA DNA -7 159 102 431 262 29 0 chr5 171196872 171196975 -31888557 + L1MC4 LINE L1 6614 6719 -1323 375 289 39 10 chr5 171196887 171196991 -31888541 - L1MC4 LINE L1 -1323 6719 6613 * 489 316 107 0 chr5 171197020 171197245 -31888287 - L1ME4a LINE L1 -38 6083 5835 212 307 88 35 chr5 171197267 171197381 -31888151 - L2 LINE L2 0 3272 3153 376 278 66 12 chr5 171197441 171197606 -31887926 - L1ME3 LINE L1 -1 6161 5986 788 229 45 79 chr5 171198051 171198405 -31887127 + L1MC4 LINE L1 7701 8042 0 765 134 25 0 chr5 171198513 171198632 -31886900 - LTR12 LTR ERV1 -234 480 359 329 219 0 12 chr5 171198632 171198714 -31886818 - LTR30 LTR ERV1 -98 624 544 900 155 161 10 chr5 171198720 171198913 -31886619 - LTR12 LTR ERV1 -440 274 53 226 250 0 0 chr5 171198913 171198965 -31886567 - LTR30 LTR ERV1 -670 52 1 182 265 29 59 chr5 171198986 171199054 -31886478 + MIR3 SINE MIR 143 208 0 221 81 0 27 chr5 171199228 171199265 -31886267 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 466 274 9 9 chr5 171199447 171199560 -31885972 - MIR SINE MIR -63 145 33 2155 96 33 0 chr5 171199577 171199872 -31885660 - AluSg SINE Alu 0 304 1 238 287 58 86 chr5 171201686 171201860 -31883672 + L2 LINE L2 2917 3085 -187 210 237 17 0 chr5 171201871 171201930 -31883602 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 194 256 122 24 chr5 171201930 171202012 -31883520 - L2 LINE L2 -47 3225 3136 2314 106 6 6 chr5 171202259 171202570 -31882962 - AluSx SINE Alu 0 312 2 546 248 8 8 chr5 171202624 171202745 -31882787 - MIR SINE MIR -68 140 20 2368 92 3 0 chr5 171202946 171203240 -31882292 - AluSp SINE Alu -18 295 1 2013 128 0 7 chr5 171203304 171203586 -31881946 + AluSx SINE Alu 1 280 -32 233 87 0 22 chr5 171203587 171203633 -31881899 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 440 276 67 0 chr5 171203979 171204113 -31881419 + MIR SINE MIR 79 221 -41 * 923 268 13 4 chr5 171204103 171204338 -31881194 + MIR SINE MIR 7 243 -19 579 258 98 44 chr5 171204499 171204763 -31880769 - L1MC4a LINE L1 -1804 6004 5719 895 124 0 29 chr5 171204763 171204900 -31880632 - FLAM_C SINE Alu 0 133 1 579 258 98 44 chr5 171204900 171204953 -31880579 - L1MC4a LINE L1 -2089 5719 5670 447 226 11 32 chr5 171205117 171205210 -31880322 - MER5A DNA MER1_type -98 91 1 213 246 102 85 chr5 171205226 171205344 -31880188 + MIR SINE MIR 143 262 0 332 210 163 15 chr5 171206001 171206113 -31879419 + MIR SINE MIR 30 146 -62 270 291 250 14 chr5 171206358 171206506 -31879026 + MIR SINE MIR 65 247 -15 180 0 0 0 chr5 171207192 171207212 -31878320 + (A)n Simple_repeat Simple_repeat 1 20 0 719 236 83 1 chr5 171207359 171207534 -31877998 - MIR SINE MIR 0 262 74 776 233 127 18 chr5 171207552 171207827 -31877705 + Charlie1b DNA MER1_type 5 309 -214 1050 163 0 0 chr5 171207829 171207989 -31877543 + FRAM SINE Alu 4 163 -13 297 170 93 103 chr5 171207997 171208080 -31877452 + Charlie1b DNA MER1_type 332 414 -2347 739 122 16 8 chr5 171208080 171208203 -31877329 - L1PB3 LINE L1 -2 6152 6029 297 170 93 103 chr5 171208203 171208238 -31877294 + Charlie1b DNA MER1_type 414 448 -2313 2197 107 3 23 chr5 171208238 171208546 -31876986 - AluSq SINE Alu -11 302 1 297 170 93 103 chr5 171208546 171208620 -31876912 + Charlie1b DNA MER1_type 448 523 0 211 311 61 61 chr5 171209691 171209839 -31875693 + MIR SINE MIR 81 228 -34 834 245 144 89 chr5 171209893 171210117 -31875415 + L2 LINE L2 2817 3027 -286 1720 159 7 34 chr5 171210117 171210277 -31875255 - AluJo SINE Alu -20 292 129 218 32 32 0 chr5 171210277 171210308 -31875224 + (TA)n Simple_repeat Simple_repeat 2 33 0 1917 134 0 47 chr5 171210308 171210606 -31874926 - AluSx SINE Alu -28 284 1 1720 159 7 34 chr5 171210606 171210740 -31874792 - AluJo SINE Alu -181 131 5 834 245 144 89 chr5 171210740 171210952 -31874580 + L2 LINE L2 3027 3277 -36 204 274 215 16 chr5 171211569 171211755 -31873777 + L2 LINE L2 2805 3027 -286 242 361 56 0 chr5 171211770 171211878 -31873654 + MIR3 SINE MIR 83 196 -12 572 318 156 22 chr5 171211910 171212641 -31872891 - L2 LINE L2 -13 3300 2459 243 300 91 27 chr5 171212754 171212864 -31872668 + L2 LINE L2 3137 3253 -19 288 300 0 0 chr5 171213854 171213924 -31871608 + MIR SINE MIR 81 150 -58 456 282 107 7 chr5 171214421 171214570 -31870962 - MIR3 SINE MIR -24 184 21 290 238 111 66 chr5 171214727 171214908 -31870624 + MIR SINE MIR 23 211 -51 804 286 40 94 chr5 171214913 171215510 -31870022 + MLT1K LTR MaLR 24 588 0 241 254 63 0 chr5 171215539 171215602 -31869930 + MLT1L LTR MaLR 4 70 -545 356 265 115 65 chr5 171215700 171216060 -31869472 + MLT1J LTR MaLR 120 605 -10 615 246 77 31 chr5 171216129 171216324 -31869208 - MIR SINE MIR 0 262 59 508 217 61 9 chr5 171217199 171217314 -31868218 - MIR3 SINE MIR -52 156 36 191 219 0 0 chr5 171217490 171217531 -31868001 - L2 LINE L2 0 3313 3273 1769 108 0 13 chr5 171217616 171217847 -31867685 + AluSx SINE Alu 1 228 -84 965 164 0 0 chr5 171217852 171218028 -31867504 + AluSg/x SINE Alu 136 311 0 333 328 8 15 chr5 171218161 171218295 -31867237 + (CA)n Simple_repeat Simple_repeat 2 134 0 486 244 114 103 chr5 171218919 171219190 -31866342 + MER115 DNA AcHobo 100 373 -320 544 281 179 0 chr5 171219461 171219657 -31865875 + MIR SINE MIR 15 245 -17 326 291 68 34 chr5 171219967 171220084 -31865448 + L2 LINE L2 2924 3044 -228 971 120 14 0 chr5 171220408 171220550 -31864982 - AluSg/x SINE Alu -11 301 158 188 351 61 0 chr5 171220831 171220945 -31864587 - L2 LINE L2 -224 3048 2928 872 33 73 10 chr5 171221230 171221634 -31863898 + (CA)n Simple_repeat Simple_repeat 1 429 0 218 313 15 15 chr5 171221654 171221721 -31863811 + L2 LINE L2 3244 3310 -3 278 296 104 26 chr5 171222451 171222566 -31862966 + MIR3 SINE MIR 76 199 -9 347 295 62 0 chr5 171222980 171223092 -31862440 + MIR SINE MIR 36 154 -108 227 318 154 0 chr5 171223140 171223250 -31862282 - L2 LINE L2 0 3272 3146 718 155 0 0 chr5 171223264 171223380 -31862152 + MER3 DNA MER1_type 54 122 -87 1609 180 14 16 chr5 171223403 171223770 -31861762 + MER3 DNA MER1_type 2259 2624 0 245 289 145 0 chr5 171223804 171223887 -31861645 + MIR SINE MIR 163 257 -5 21 0 0 0 chr5 171224293 171224314 -31861218 + AT_rich Low_complexity Low_complexity 1 21 0 4551 181 27 21 chr5 171224374 171224836 -31860696 + L1MB7 LINE L1 4613 5071 -1113 1917 136 4 0 chr5 171224836 171225108 -31860424 - AluSx SINE Alu -39 273 1 4551 181 27 21 chr5 171225108 171225842 -31859690 + L1MB7 LINE L1 5071 5819 -365 2167 112 27 0 chr5 171225842 171226136 -31859396 + AluSq SINE Alu 1 302 -11 4551 181 27 21 chr5 171226136 171226496 -31859036 + L1MB7 LINE L1 5819 6175 -9 193 311 27 14 chr5 171226517 171226591 -31858941 + MIR SINE MIR 1 75 -187 559 162 0 0 chr5 171226649 171226748 -31858784 - FLAM_A SINE Alu -3 139 41 181 357 36 0 chr5 171226778 171226834 -31858698 - L3b LINE CR1 -26 1557 1500 261 363 0 0 chr5 171226881 171226961 -31858571 - MIR SINE MIR 0 262 183 375 272 128 56 chr5 171227056 171227175 -31858357 + MIR SINE MIR 13 151 -111 867 150 0 0 chr5 171227175 171227308 -31858224 + FLAM_C SINE Alu 1 133 0 375 272 128 56 chr5 171227308 171227368 -31858164 + MIR SINE MIR 151 205 -57 186 43 0 0 chr5 171227553 171227576 -31857956 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 371 299 21 0 chr5 171227660 171227757 -31857775 - MIR SINE MIR -93 115 17 604 299 79 45 chr5 171228256 171228610 -31856922 + L2 LINE L2 2948 3313 0 511 243 86 53 chr5 171228640 171228792 -31856740 + MIR3 SINE MIR 30 186 -22 390 318 104 26 chr5 171228939 171229093 -31856439 + L2 LINE L2 3107 3272 0 238 259 0 0 chr5 171229496 171229550 -31855982 - MER58 DNA MER1_type 0 2420 2367 965 204 22 4 chr5 171229577 171229802 -31855730 - MER58 DNA MER1_type -2191 229 1 451 293 158 34 chr5 171229925 171230222 -31855310 - MER102b DNA MER1_type -2 339 6 2011 143 7 7 chr5 171230534 171230835 -31854697 - AluJb SINE Alu -11 301 1 1333 230 65 18 chr5 171230882 171231265 -31854267 - L1ME3 LINE L1 -139 6023 5623 394 309 54 13 chr5 171231457 171231606 -31853926 - MIR SINE MIR -105 157 3 226 244 49 12 chr5 171231618 171231700 -31853832 + MLT1K LTR MaLR 1 85 -503 359 172 11 97 chr5 171231758 171231851 -31853681 - MER96 DNA MER1_type? 0 175 91 847 178 18 6 chr5 171232349 171232512 -31853020 + MER5B DNA MER1_type 14 178 0 184 265 73 59 chr5 171232884 171232952 -31852580 + MIR SINE MIR 43 111 -97 234 253 11 88 chr5 171233027 171233090 -31852442 - MER5A DNA MER1_type -77 112 56 1530 173 25 110 chr5 171233090 171233489 -31852043 - MLT1A1 LTR MaLR 0 365 1 234 253 11 88 chr5 171233489 171233516 -31852016 - MER5A DNA MER1_type -133 56 29 206 333 0 0 chr5 171233683 171233770 -31851762 + MIR3 SINE MIR 116 202 -6 615 27 0 0 chr5 171234117 171234190 -31851342 + (TCCA)n Simple_repeat Simple_repeat 2 74 0 239 188 0 21 chr5 171234297 171234345 -31851187 - L2 LINE L2 -4 3268 3222 237 343 46 57 chr5 171234535 171234710 -31850822 + L2 LINE L2 3073 3245 -27 223 283 0 0 chr5 171235359 171235405 -31850127 - MER5A DNA MER1_type 0 189 144 203 318 108 39 chr5 171235724 171235853 -31849679 - MER5A DNA MER1_type -45 144 7 * 413 358 7 0 chr5 171235852 171236000 -31849532 - MIR3 SINE MIR -41 167 19 291 250 28 21 chr5 171236282 171236376 -31849156 + MIR3 SINE MIR 60 158 -50 274 85 102 0 chr5 171236425 171236484 -31849048 + L1MA8 LINE L1 6223 6287 -4 197 185 11 174 chr5 171236518 171236610 -31848922 + MER5A DNA MER1_type 111 187 -2 180 367 33 0 chr5 171236980 171237040 -31848492 + MIR SINE MIR 80 141 -121 672 246 79 37 chr5 171237202 171237417 -31848115 - MIR SINE MIR -36 226 3 558 227 17 0 chr5 171237670 171237789 -31847743 - MER45A DNA AcHobo 0 178 58 561 296 6 19 chr5 171237843 171238002 -31847530 + MIR SINE MIR 1 157 -105 314 87 0 0 chr5 171238007 171238053 -31847479 + MADE1 DNA Mariner 35 80 0 211 244 0 0 chr5 171238127 171238172 -31847360 + (TTA)n Simple_repeat Simple_repeat 3 47 0 574 178 56 9 chr5 171239152 171239259 -31846273 - MER81 DNA DNA 0 114 3 261 299 81 0 chr5 171239650 171239737 -31845795 - MIR3 SINE MIR -6 202 109 570 150 187 10 chr5 171239738 171239865 -31845667 - MER5B DNA MER1_type -23 166 1 475 284 97 14 chr5 171239982 171240181 -31845351 + MIR SINE MIR 11 211 -51 2315 109 0 3 chr5 171240198 171240501 -31845031 - AluSc SINE Alu -7 302 1 276 306 0 0 chr5 171241511 171241583 -31843949 - MIR SINE MIR -117 145 74 374 316 112 32 chr5 171241647 171241834 -31843698 + L3 LINE CR1 1358 1559 -18 241 309 86 0 chr5 171241822 171241903 -31843629 + L2 LINE L2 3155 3242 -30 * 201 244 0 0 chr5 171242025 171242070 -31843462 - MER5B DNA MER1_type 0 178 134 356 270 0 0 chr5 171242182 171242256 -31843276 - MIR SINE MIR -87 175 102 867 200 61 39 chr5 171242290 171242520 -31843012 - MIR SINE MIR 0 262 28 373 268 86 61 chr5 171242559 171242757 -31842775 + MIR3 SINE MIR 6 208 0 313 274 85 9 chr5 171244197 171244303 -31841229 + MIR3 SINE MIR 66 179 -29 1741 165 31 21 chr5 171244318 171244609 -31840923 - AluJo SINE Alu -18 294 1 201 303 191 0 chr5 171245199 171245288 -31840244 - MER5B DNA MER1_type -37 141 36 * 484 243 118 14 chr5 171245223 171245367 -31840165 + MIR SINE MIR 49 207 -55 481 260 124 23 chr5 171245475 171245652 -31839880 + L2 LINE L2 3119 3313 0 255 231 115 19 chr5 171245739 171245845 -31839687 - MIR3 SINE MIR -28 180 61 249 83 0 0 chr5 171246070 171246106 -31839426 + (CA)n Simple_repeat Simple_repeat 2 37 0 294 327 31 31 chr5 171246607 171246769 -31838763 - L2 LINE L2 -181 3091 2930 425 213 47 145 chr5 171246958 171247051 -31838481 - L1MC5 LINE L1 -47 7914 7813 2193 134 0 3 chr5 171247051 171247364 -31838168 - AluSx SINE Alu 0 312 1 425 213 47 145 chr5 171247364 171247505 -31838027 - L1MC5 LINE L1 -148 7813 7703 410 269 199 10 chr5 171248196 171248397 -31837135 + MIR SINE MIR 24 262 0 2070 121 4 4 chr5 171248600 171248880 -31836652 - AluSx SINE Alu -19 293 14 323 284 43 21 chr5 171248885 171249026 -31836506 - L1ME3A LINE L1 -59 6111 5968 507 235 24 47 chr5 171249390 171249560 -31835972 + MIR SINE MIR 12 177 -85 251 322 171 0 chr5 171249663 171249809 -31835723 + MIR SINE MIR 22 192 -70 2123 149 0 0 chr5 171250199 171250507 -31835025 - AluSx SINE Alu -4 308 1 2329 208 57 20 chr5 171250518 171251061 -31834471 - L1ME3A LINE L1 -5 6165 5603 489 282 15 8 chr5 171251648 171251779 -31833753 - MER5A DNA MER1_type 0 189 58 219 69 0 0 chr5 171252257 171252286 -31833246 + (GGCTG)n Simple_repeat Simple_repeat 2 30 0 714 237 82 27 chr5 171252460 171252679 -31832853 + MIR SINE MIR 28 258 -4 291 332 61 31 chr5 171252935 171253131 -31832401 - MIR SINE MIR -34 228 27 356 247 138 26 chr5 171253749 171253967 -31831565 - MIR SINE MIR -2 260 17 311 279 45 18 chr5 171254085 171254196 -31831336 + MIR3 SINE MIR 43 156 -52 289 319 17 0 chr5 171254349 171254465 -31831067 - MIR SINE MIR 0 262 145 1131 118 20 90 chr5 171254507 171254634 -31830898 - L1MA8 LINE L1 -5 6286 6184 1997 163 0 0 chr5 171254634 171254934 -31830598 - AluJo SINE Alu -12 300 1 1131 118 20 90 chr5 171254934 171255061 -31830471 - L1MA8 LINE L1 -107 6184 6050 3302 158 32 35 chr5 171255196 171255821 -31829711 - L1MA8 LINE L1 -256 6035 5413 918 284 93 0 chr5 171256511 171256867 -31828665 + L2 LINE L2 2922 3310 -3 536 153 0 181 chr5 171256986 171257130 -31828402 + ORSL DNA AcHobo 1 118 -157 1864 156 53 0 chr5 171257130 171257431 -31828101 + MER7A DNA MER2_type 1 315 -31 320 196 0 0 chr5 171257546 171257597 -31827935 + MER7A DNA MER2_type 287 337 0 215 206 76 76 chr5 171257790 171257882 -31827650 - MER5B DNA MER1_type -86 92 1 1081 181 5 19 chr5 171258229 171258439 -31827093 - MER3 DNA MER1_type 0 209 3 542 289 80 5 chr5 171258667 171258854 -31826678 - MIR SINE MIR -45 217 17 333 293 20 54 chr5 171259205 171259352 -31826180 - MIR SINE MIR -52 210 69 240 223 19 97 chr5 171259951 171260054 -31825478 - MIR SINE MIR -68 140 46 312 244 67 52 chr5 171260207 171260342 -31825190 - L3 LINE CR1 -20 1557 1421 215 301 27 0 chr5 171260326 171260399 -31825133 + L3 LINE CR1 628 702 -875 * 336 219 14 0 chr5 171260576 171260649 -31824883 + MER113 DNA MER1_type? 325 398 -123 1766 161 25 3 chr5 171260704 171260990 -31824542 + AluJo SINE Alu 1 292 -20 2307 113 3 0 chr5 171260995 171261304 -31824228 + AluSg SINE Alu 1 310 0 263 179 0 18 chr5 171261304 171261360 -31824172 + MER113 DNA MER1_type? 397 451 -70 240 281 206 14 chr5 171261423 171261569 -31823963 + MIR3 SINE MIR 27 200 -8 312 231 183 0 chr5 171261596 171261700 -31823832 - L2 LINE L2 0 3313 3191 2205 90 4 7 chr5 171261719 171261997 -31823535 - AluSx SINE Alu -12 300 24 318 351 32 11 chr5 171262188 171262373 -31823159 - MLT1K LTR MaLR -398 190 2 389 270 46 20 chr5 171262521 171262673 -31822859 + MIR SINE MIR 104 259 -3 204 308 26 13 chr5 171263211 171263289 -31822243 + L2 LINE L2 2743 2821 -493 2902 162 28 66 chr5 171263471 171264107 -31821425 + LTR9 LTR ERV1 1 612 0 1555 169 15 32 chr5 171264153 171264491 -31821041 + L1MA4A LINE L1 5971 6302 -1 246 237 17 17 chr5 171264491 171264550 -31820982 - MER102b DNA MER1_type -50 291 233 6460 109 15 8 chr5 171264872 171265843 -31819689 - L1MA3 LINE L1 0 6305 5328 2063 95 0 7 chr5 171265844 171266117 -31819415 - AluSg SINE Alu -1 309 39 9940 152 32 34 chr5 171266117 171267839 -31817693 - L1MA3 LINE L1 -1096 5050 3326 10651 45 9 78 chr5 171267839 171269294 -31816238 - SVA Other Other 0 1386 32 213 39 0 0 chr5 171269298 171269324 -31816208 + (AGGGGG)n Simple_repeat Simple_repeat 3 28 0 9940 152 32 34 chr5 171269324 171269572 -31815960 - L1MA3 LINE L1 -2823 3323 3079 2071 130 7 3 chr5 171269572 171269871 -31815661 - AluSx SINE Alu -12 300 1 842 258 43 29 chr5 171270179 171270636 -31814896 + MLT1J LTR MaLR 3 509 -2 1710 158 32 0 chr5 171270667 171270946 -31814586 - AluJo SINE Alu -19 293 6 392 254 24 8 chr5 171271039 171271165 -31814367 - Charlie1 DNA MER1_type -2 2759 2632 2264 101 0 3 chr5 171271170 171271458 -31814074 + AluSc SINE Alu 3 289 -20 2206 119 0 7 chr5 171271461 171271763 -31813769 + AluSq SINE Alu 1 300 -13 551 204 0 6 chr5 171272201 171272382 -31813150 + GA-rich Low_complexity Low_complexity 1 180 0 545 300 32 36 chr5 171272435 171272688 -31812844 + MLT1J LTR MaLR 1 252 -259 258 244 156 11 chr5 171272884 171272974 -31812558 + MLT1K LTR MaLR 475 577 -11 1903 165 0 0 chr5 171273463 171273748 -31811784 - AluJo SINE Alu -15 297 13 1814 138 45 14 chr5 171273767 171274057 -31811475 - AluJb SINE Alu -13 299 1 3155 97 14 7 chr5 171274761 171275206 -31810326 - MER83 LTR ERV1 0 448 1 288 305 99 14 chr5 171275565 171275706 -31809826 + MIR SINE MIR 7 159 -103 * 316 298 18 9 chr5 171275704 171275818 -31809714 + MIR3 SINE MIR 40 154 -54 234 278 0 0 chr5 171276129 171276183 -31809349 - MIR3 SINE MIR -4 204 151 1272 231 133 46 chr5 171276353 171276811 -31808721 + MLT1J LTR MaLR 1 498 -13 229 237 26 88 chr5 171276915 171277029 -31808503 - L1ME3 LINE L1 -95 6067 5961 351 176 22 140 chr5 171277181 171277245 -31808287 - MIR3 SINE MIR -51 157 116 459 99 0 0 chr5 171277245 171277316 -31808216 - L1MA8 LINE L1 -4 6287 6217 351 176 22 140 chr5 171277316 171277387 -31808145 - MIR3 SINE MIR -92 116 38 2018 142 3 7 chr5 171277949 171278245 -31807287 - AluSx SINE Alu -17 295 1 405 291 12 18 chr5 171278468 171278633 -31806899 - MER103 DNA DNA -1 165 2 470 270 0 7 chr5 171279374 171279522 -31806010 + L1MC4a LINE L1 5679 5825 -1983 609 200 36 0 chr5 171279686 171279796 -31805736 + MER81 DNA DNA 1 114 0 2385 93 0 7 chr5 171279918 171280220 -31805312 - AluSg SINE Alu -10 300 1 1968 122 64 14 chr5 171280660 171280955 -31804577 + AluSx SINE Alu 1 310 -2 755 195 101 0 chr5 171281152 171281301 -31804231 + FRAM SINE Alu 1 159 -17 24 0 0 0 chr5 171281508 171281532 -31804000 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr5 171281634 171281657 -31803875 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 405 0 0 0 chr5 171281656 171281701 -31803831 + (TA)n Simple_repeat Simple_repeat 1 45 0 2195 131 0 0 chr5 171281981 171282279 -31803253 - AluSx SINE Alu -14 298 1 233 308 29 29 chr5 171282371 171282475 -31803057 + L1MC4a LINE L1 7247 7350 -458 1108 215 78 48 chr5 171282485 171282922 -31802610 + L1MC5 LINE L1 7268 7717 -244 1299 143 0 0 chr5 171282933 171283122 -31802410 + AluSg/x SINE Alu 122 310 0 576 223 60 43 chr5 171283145 171283329 -31802203 + L1MC5 LINE L1 7741 7927 -34 2329 95 3 3 chr5 171283353 171283657 -31801875 - AluSq SINE Alu -9 304 1 5040 155 48 59 chr5 171283814 171284897 -31800635 - MER11C LTR ERVK 0 1071 1 1072 232 24 0 chr5 171284904 171285115 -31800417 - MER58A DNA MER1_type -8 216 1 1772 165 11 0 chr5 171285140 171285442 -31800090 - AluJo SINE Alu 0 305 1 244 220 68 0 chr5 171285443 171285502 -31800030 - MIR SINE MIR -57 151 89 480 18 0 0 chr5 171285502 171285559 -31799973 + (CA)n Simple_repeat Simple_repeat 1 57 0 796 220 128 124 chr5 171285696 171285847 -31799685 - MLT1J LTR MaLR 0 511 362 909 205 0 6 chr5 171285847 171286008 -31799524 + FRAM SINE Alu 1 160 -6 796 220 128 124 chr5 171286008 171286333 -31799199 - MLT1J LTR MaLR -149 362 33 2114 83 58 0 chr5 171286334 171286789 -31798743 - AluSp SINE Alu 0 471 1 2256 110 3 3 chr5 171287569 171287869 -31797663 - AluSx SINE Alu -12 300 1 339 234 19 56 chr5 171288163 171288270 -31797262 + MLT1F1 LTR MaLR 36 138 -429 397 224 0 0 chr5 171288285 171288361 -31797171 - L1MD3 LINE L1 -235 7760 7685 2282 181 19 74 chr5 171288393 171288759 -31796773 + L1MD3 LINE L1 7472 7800 -195 1512 120 136 27 chr5 171288759 171288887 -31796645 + AluSg SINE Alu 9 122 -188 2320 104 0 0 chr5 171288887 171289185 -31796347 + AluSc SINE Alu 1 298 -11 1512 120 136 27 chr5 171289185 171289314 -31796218 + AluSg SINE Alu 122 294 -16 2282 181 19 74 chr5 171289314 171289487 -31796045 + L1MD3 LINE L1 7800 7981 -14 853 161 0 15 chr5 171289490 171289627 -31795905 + AluJo SINE Alu 2 136 -176 523 289 22 11 chr5 171289762 171289942 -31795590 - MIR SINE MIR -5 257 76 24 0 0 0 chr5 171290099 171290123 -31795409 + AT_rich Low_complexity Low_complexity 1 24 0 1790 163 0 30 chr5 171290676 171290977 -31794555 + AluJo SINE Alu 1 292 -20 557 122 67 0 chr5 171292084 171292248 -31793284 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 741 239 129 75 chr5 171292596 171293052 -31792480 - L2 LINE L2 0 3313 2833 212 311 16 0 chr5 171293541 171293602 -31791930 + MER5A DNA MER1_type 78 139 -50 2300 118 0 3 chr5 171293660 171293974 -31791558 - AluSq SINE Alu 0 313 1 309 289 53 26 chr5 171294071 171294223 -31791309 + MER5B DNA MER1_type 15 170 -8 814 207 50 0 chr5 171294463 171294642 -31790890 + MER53 DNA DNA 2 189 0 288 229 29 0 chr5 171294674 171294744 -31790788 + MIR3 SINE MIR 112 183 -25 227 186 0 0 chr5 171295363 171295406 -31790126 + (ATG)n Simple_repeat Simple_repeat 2 44 0 214 224 45 15 chr5 171295430 171295497 -31790035 - MIR SINE MIR -83 179 111 240 280 227 0 chr5 171295688 171295820 -31789712 - MER113 DNA MER1_type? 0 521 360 1999 83 90 0 chr5 171295872 171296138 -31789394 + AluSc SINE Alu 1 290 -19 267 140 53 114 chr5 171296161 171296275 -31789257 - MER113 DNA MER1_type? -283 238 132 35 41 0 0 chr5 171296262 171296311 -31789221 + AT_rich Low_complexity Low_complexity 1 49 0 * 259 305 198 28 chr5 171296794 171296971 -31788561 + L2 LINE L2 3107 3313 0 1002 210 19 5 chr5 171297365 171297570 -31787962 + MER3 DNA MER1_type 2 209 0 445 310 81 20 chr5 171297601 171297798 -31787734 + L2 LINE L2 3090 3298 -15 207 0 0 0 chr5 171297800 171297823 -31787709 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 210 217 61 26 chr5 171299565 171299680 -31785852 + (CAGA)n Simple_repeat Simple_repeat 3 121 0 421 308 44 6 chr5 171300029 171300188 -31785344 + MIR3 SINE MIR 23 187 -21 317 243 131 19 chr5 171300735 171300842 -31784690 - MIR3 SINE MIR -9 199 81 421 234 54 27 chr5 171301373 171301484 -31784048 + L2 LINE L2 3193 3306 -7 2080 127 17 3 chr5 171302428 171302728 -31782804 + AluSx SINE Alu 1 304 -8 382 322 21 14 chr5 171302728 171302871 -31782661 + MER5A DNA MER1_type 44 187 -2 382 167 42 0 chr5 171302918 171302990 -31782542 + MER103 DNA DNA 27 101 -65 220 203 34 17 chr5 171303377 171303436 -31782096 + MIR SINE MIR 86 145 -63 2341 119 0 0 chr5 171303824 171304136 -31781396 - AluJb SINE Alu 0 312 1 425 299 68 27 chr5 171305164 171305311 -31780221 - MIR3 SINE MIR -21 187 35 399 321 8 37 chr5 171305523 171305657 -31779875 - MIR SINE MIR -55 153 24 2181 186 45 55 chr5 171305787 171306336 -31779196 + MER68 LTR ERV1 1 544 -18 184 293 17 17 chr5 171306650 171306708 -31778824 + L2 LINE L2 3215 3272 0 644 310 116 14 chr5 171306754 171306970 -31778562 - MIR SINE MIR -5 257 20 309 267 175 8 chr5 171308120 171308240 -31777292 - MIR SINE MIR -110 152 13 596 115 10 10 chr5 171309103 171309199 -31776333 + MER4A LTR ERV1 1 96 -568 2583 106 3 16 chr5 171309201 171309587 -31775945 + MER4A LTR ERV1 263 643 -21 378 0 0 0 chr5 171309650 171309692 -31775840 + (TG)n Simple_repeat Simple_repeat 1 42 0 2241 102 0 13 chr5 171309693 171309997 -31775535 - AluSg SINE Alu -10 300 1 257 289 0 0 chr5 171310663 171310715 -31774817 - MIR3 SINE MIR -48 160 109 470 277 10 72 chr5 171311454 171311649 -31773883 - L3 LINE CR1 -72 1505 1323 1303 217 48 24 chr5 171311962 171312335 -31773197 - MER113 DNA MER1_type? -41 480 99 218 217 0 0 chr5 171312374 171312420 -31773112 + MIR3 SINE MIR 154 199 -9 225 188 0 21 chr5 171312443 171312491 -31773041 + CT-rich Low_complexity Low_complexity 3 49 0 406 258 47 77 chr5 171312913 171313146 -31772386 - L3 LINE CR1 -185 1392 1167 309 316 0 0 chr5 171313229 171313305 -31772227 + MIR3 SINE MIR 97 172 -36 242 320 14 0 chr5 171314239 171314318 -31771214 - MIR SINE MIR -63 145 74 208 255 0 102 chr5 171314962 171315060 -31770472 - MIR SINE MIR -70 138 51 711 247 0 0 chr5 171315647 171315797 -31769735 + MER3 DNA MER1_type 10 159 -50 1985 143 0 29 chr5 171315900 171316215 -31769317 - AluSx SINE Alu -2 310 5 409 119 0 0 chr5 171316219 171316278 -31769254 + MER3 DNA MER1_type 146 204 -5 673 285 14 19 chr5 171316298 171316505 -31769027 + MIR SINE MIR 2 207 -55 210 360 23 0 chr5 171317021 171317107 -31768425 + MIR SINE MIR 34 121 -87 2314 98 0 16 chr5 171317293 171317611 -31767921 + AluSq SINE Alu 1 313 0 442 258 26 82 chr5 171318137 171318331 -31767201 - MER117 DNA MER1_type 0 197 15 315 345 0 0 chr5 171318341 171318425 -31767107 - MIR SINE MIR -60 148 65 234 0 0 0 chr5 171318775 171318801 -31766731 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 300 261 11 43 chr5 171319309 171319401 -31766131 + MIR SINE MIR 65 153 -55 436 265 8 30 chr5 171320130 171320262 -31765270 - MIR3 SINE MIR -6 202 74 321 277 67 45 chr5 171320565 171320741 -31764791 - MIR SINE MIR -50 212 35 258 32 0 0 chr5 171321246 171321277 -31764255 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 324 0 0 0 chr5 171321276 171321312 -31764220 + (CA)n Simple_repeat Simple_repeat 1 36 0 214 337 79 11 chr5 171321415 171321504 -31764028 - MIR3 SINE MIR -31 177 83 215 114 0 68 chr5 171322863 171322907 -31762625 + (TCC)n Simple_repeat Simple_repeat 1 41 0 298 325 115 6 chr5 171323023 171323180 -31762352 - MIR3 SINE MIR -8 200 27 368 256 72 24 chr5 171323506 171323631 -31761901 - MIR SINE MIR -76 186 56 2167 119 0 22 chr5 171323780 171324099 -31761433 - AluSx SINE Alu 0 312 1 461 114 91 0 chr5 171324137 171324225 -31761307 - HY1 scRNA scRNA -2 110 15 715 284 196 24 chr5 171324430 171324547 -31760985 + L2 LINE L2 2818 2913 -400 2243 122 0 0 chr5 171324547 171324843 -31760689 - AluSx SINE Alu -14 298 3 715 284 196 24 chr5 171324843 171325148 -31760384 + L2 LINE L2 2913 3313 0 563 248 9 0 chr5 171325368 171325514 -31760018 + FLAM_A SINE Alu 1 147 0 2097 130 0 10 chr5 171325514 171325815 -31759717 + AluSx SINE Alu 1 298 -14 2295 96 13 13 chr5 171326238 171326551 -31758981 + AluSq SINE Alu 1 313 0 287 206 41 72 chr5 171326663 171326760 -31758772 + MIR SINE MIR 20 113 -95 802 177 0 27 chr5 171326770 171326917 -31758615 - FLAM_C SINE Alu 0 143 1 802 279 82 16 chr5 171326963 171327207 -31758325 - MIR SINE MIR 0 262 3 643 273 216 14 chr5 171327541 171327907 -31757625 - L2 LINE L2 -1 3312 2873 210 171 0 0 chr5 171328134 171328169 -31757363 - MIR SINE MIR -141 67 33 2009 176 85 56 chr5 171328734 171328899 -31756633 - MLT1D LTR MaLR -8 497 338 2215 123 3 0 chr5 171328899 171329207 -31756325 - AluSp SINE Alu -4 309 1 2009 176 85 56 chr5 171329207 171329524 -31756008 - MLT1D LTR MaLR -167 338 1 380 302 79 0 chr5 171329524 171329650 -31755882 - MIR SINE MIR -99 163 28 198 346 223 0 chr5 171329788 171329918 -31755614 - MIR3 SINE MIR -21 187 29 2239 116 0 7 chr5 171330313 171330614 -31754918 - AluSg SINE Alu -11 299 1 266 312 54 32 chr5 171330723 171330816 -31754716 - MIR3 SINE MIR -106 102 8 915 179 39 7 chr5 171330952 171331304 -31754228 - MSTD LTR MaLR -1 395 1 299 275 0 34 chr5 171331392 171331506 -31754026 + MIR SINE MIR 86 145 -63 496 291 139 26 chr5 171331529 171331759 -31753773 + MIR SINE MIR 3 258 -4 344 276 24 16 chr5 171331855 171331982 -31753550 - MER103 DNA DNA -10 156 29 540 297 32 13 chr5 171332057 171332212 -31753320 - MIR3 SINE MIR -46 162 5 207 94 38 38 chr5 171333108 171333161 -31752371 + T-rich Low_complexity Low_complexity 1 53 0 409 70 0 0 chr5 171333180 171333237 -31752295 - U3 snRNA snRNA -160 57 1 215 345 0 24 chr5 171333296 171333380 -31752152 - MIR3 SINE MIR -46 162 81 1791 157 14 3 chr5 171333585 171333878 -31751654 + AluJo SINE Alu 1 296 -16 2180 123 3 0 chr5 171333880 171334164 -31751368 + AluSx SINE Alu 2 289 -23 330 26 0 0 chr5 171334164 171334203 -31751329 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 313 252 101 93 chr5 171334211 171334308 -31751224 + MIR3 SINE MIR 24 124 -84 2451 98 3 0 chr5 171334308 171334613 -31750919 - AluSq SINE Alu -7 306 1 313 252 101 93 chr5 171334613 171334654 -31750878 + MIR3 SINE MIR 124 163 -45 2148 142 0 0 chr5 171335548 171335859 -31749673 + AluSx SINE Alu 1 311 -1 2192 78 44 30 chr5 171335863 171336158 -31749374 + AluSc SINE Alu 1 299 -10 332 231 192 54 chr5 171336180 171336221 -31749311 + L1M4c LINE L1 1011 1045 -5339 1537 208 65 59 chr5 171336221 171336682 -31748850 + LTR37B LTR ERV1 5 468 0 332 231 192 54 chr5 171336682 171336900 -31748632 + L1M4c LINE L1 1045 1306 -5078 21 0 0 0 chr5 171336995 171337016 -31748516 + AT_rich Low_complexity Low_complexity 1 21 0 887 144 0 14 chr5 171337029 171337168 -31748364 - FLAM_C SINE Alu 0 143 7 1909 150 6 34 chr5 171337215 171337535 -31747997 - AluJb SINE Alu -1 311 1 441 266 9 26 chr5 171337830 171337943 -31747589 - L2 LINE L2 -44 3269 3159 2278 95 0 14 chr5 171337955 171338251 -31747281 - AluSg SINE Alu -18 292 1 359 231 142 0 chr5 171338711 171338845 -31746687 + MER113 DNA MER1_type? 1 153 -368 1069 264 129 16 chr5 171338886 171339336 -31746196 + LTR33 LTR ERVL 21 521 0 353 236 96 70 chr5 171339399 171339628 -31745904 + L1MC4a LINE L1 5809 6043 -1765 574 99 0 11 chr5 171339708 171339799 -31745733 - LTR23 LTR ERV1 -187 250 161 580 197 33 40 chr5 171339872 171340024 -31745508 - LTR23 LTR ERV1 -286 151 1 237 217 33 0 chr5 171340061 171340121 -31745411 + L1MC5 LINE L1 7153 7214 -747 749 157 4 187 chr5 171340196 171340431 -31745101 - 7SK RNA RNA 0 193 2 826 167 0 0 chr5 171340779 171340905 -31744627 - FRAM SINE Alu -56 120 1 199 154 0 185 chr5 171340915 171340980 -31744552 - MIR SINE MIR -154 108 56 539 235 90 30 chr5 171341518 171341684 -31743848 - MIR SINE MIR -74 188 13 969 190 0 0 chr5 171341726 171341889 -31743643 + FRAM SINE Alu 1 163 -3 989 204 145 31 chr5 171342030 171342413 -31743119 + L1ME1 LINE L1 5722 6120 -46 234 0 0 0 chr5 171342355 171342381 -31743151 + (TG)n Simple_repeat Simple_repeat 2 27 0 352 183 10 173 chr5 171342381 171342508 -31743024 + L1MA10 LINE L1 6249 6334 0 1822 171 13 16 chr5 171342513 171342818 -31742714 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr5 171342820 171342854 -31742678 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 267 0 0 chr5 171343251 171343296 -31742236 - L2 LINE L2 -13 3259 3215 185 309 72 31 chr5 171344397 171344494 -31741038 - MIR SINE MIR -65 143 43 419 260 147 17 chr5 171344558 171344735 -31740797 + Charlie1 DNA MER1_type 40 239 -2522 304 92 174 92 chr5 171344719 171344788 -31740744 + Charlie1 DNA MER1_type 2620 2701 -60 * 2292 104 0 10 chr5 171344788 171345086 -31740446 - AluSx SINE Alu -17 295 1 304 92 174 92 chr5 171345086 171345114 -31740418 + Charlie1 DNA MER1_type 2701 2725 -36 631 157 0 0 chr5 171345120 171345209 -31740323 + FRAM SINE Alu 34 122 -54 587 139 0 0 chr5 171345298 171345384 -31740148 + AluS SINE Alu 1 86 -226 1670 163 0 35 chr5 171345384 171345666 -31739866 + AluJb SINE Alu 37 308 -4 535 266 142 26 chr5 171345668 171345894 -31739638 - MIR SINE MIR -3 259 8 444 218 117 58 chr5 171345978 171346119 -31739413 - MIR3 SINE MIR -42 166 18 419 200 0 0 chr5 171346923 171346998 -31738534 + L1MC5 LINE L1 7724 7798 -163 250 118 0 0 chr5 171346999 171347033 -31738499 + L1MC5 LINE L1 7751 7784 -177 483 284 37 23 chr5 171347291 171347506 -31738026 + L1ME2 LINE L1 5767 5984 -180 1695 204 19 19 chr5 171347317 171347655 -31737877 + L1MB5 LINE L1 5790 6130 -44 843 101 78 0 chr5 171347655 171347784 -31737748 - MER85 DNA T2_type 0 139 1 1695 204 19 19 chr5 171347784 171347822 -31737710 + L1MB5 LINE L1 6129 6166 -8 276 267 30 10 chr5 171348651 171348752 -31736780 + MIR SINE MIR 30 132 -76 865 236 0 0 chr5 171349143 171349300 -31736232 + FAM SINE Alu 1 157 -18 559 211 0 3 chr5 171349934 171350093 -31735439 - MER58C DNA MER1_type 0 215 18 2083 139 0 0 chr5 171350114 171350401 -31735131 - AluSx SINE Alu -25 287 1 1798 174 4 0 chr5 171350637 171350952 -31734580 - AluJo SINE Alu 0 316 1 2138 119 7 13 chr5 171350954 171351256 -31734276 - AluSx SINE Alu -12 300 1 683 299 34 17 chr5 171351264 171351562 -31733970 - L1ME LINE L1 -302 5819 5517 303 264 11 98 chr5 171351610 171351784 -31733748 + MIR3 SINE MIR 50 208 0 2184 110 3 0 chr5 171351947 171352252 -31733280 + AluSx SINE Alu 1 306 0 1007 126 44 60 chr5 171352264 171352446 -31733086 + AluJo SINE Alu 85 263 -49 2310 101 3 0 chr5 171352571 171352869 -31732663 + AluSp SINE Alu 1 299 -14 1176 74 11 58 chr5 171352869 171353058 -31732474 + AluSq SINE Alu 134 313 0 226 184 20 0 chr5 171353237 171353286 -31732246 + MIR SINE MIR 70 119 -89 344 258 35 25 chr5 171353489 171353608 -31731924 + MIR3 SINE MIR 43 163 -45 1362 134 202 24 chr5 171353643 171353896 -31731636 + AluSg1 SINE Alu 1 298 -11 25 0 0 0 chr5 171353914 171353939 -31731593 + AT_rich Low_complexity Low_complexity 1 25 0 1911 160 0 19 chr5 171354002 171354320 -31731212 - AluJb SINE Alu 0 312 1 2335 88 3 0 chr5 171354352 171354647 -31730885 + AluSp SINE Alu 11 306 -7 578 291 0 48 chr5 171354764 171354974 -31730558 + MIR SINE MIR 57 256 -6 263 254 154 0 chr5 171355290 171355400 -31730132 + MIR SINE MIR 110 236 -26 202 247 113 21 chr5 171355607 171355704 -31729828 - MER5A DNA MER1_type -76 113 8 420 263 53 0 chr5 171355848 171355962 -31729570 + L2 LINE L2 3194 3313 0 382 266 53 9 chr5 171356063 171356176 -31729356 + MIR SINE MIR 32 149 -113 2428 202 43 30 chr5 171356228 171356758 -31728774 + MLT1F LTR MaLR 6 542 0 233 347 50 8 chr5 171357026 171357147 -31728385 - MER5A DNA MER1_type -6 183 58 478 260 149 0 chr5 171357509 171357663 -31727869 + MER5A DNA MER1_type 6 182 -7 1432 148 0 19 chr5 171357694 171357910 -31727622 + AluSq SINE Alu 1 212 -101 229 164 0 115 chr5 171357910 171357971 -31727561 + FLAM_A SINE Alu 77 130 -3 2356 89 3 3 chr5 171358070 171358373 -31727159 + AluSc SINE Alu 1 303 -6 535 219 0 18 chr5 171358409 171358523 -31727009 + MER58B DNA MER1_type 230 341 0 222 297 123 33 chr5 171358609 171358821 -31726711 - MIR SINE MIR -1 261 31 2299 98 0 7 chr5 171359303 171359609 -31725923 - AluSg SINE Alu -6 304 1 300 318 101 0 chr5 171359609 171359738 -31725794 - MIR SINE MIR -108 154 13 197 24 95 0 chr5 171359781 171359823 -31725709 + CT-rich Low_complexity Low_complexity 5 50 0 2142 118 0 23 chr5 171359835 171360141 -31725391 - AluJb SINE Alu -13 299 1 473 292 75 31 chr5 171360186 171360412 -31725120 - MIR SINE MIR -6 256 21 413 220 101 9 chr5 171362516 171362625 -31722907 - MLT1B LTR MaLR -267 123 5 660 267 48 19 chr5 171362646 171362762 -31722770 + MIR SINE MIR 36 162 -100 544 224 64 0 chr5 171362762 171362887 -31722645 + MER94 DNA DNA 1 133 -1 660 267 48 19 chr5 171362887 171362980 -31722552 + MIR SINE MIR 162 251 -11 235 163 41 0 chr5 171363671 171363720 -31721812 - L1ME LINE L1 -208 5913 5863 1986 168 0 0 chr5 171363736 171364039 -31721493 + AluJb SINE Alu 1 303 -9 2240 92 0 41 chr5 171364068 171364383 -31721149 - AluSg SINE Alu 0 310 9 263 330 21 0 chr5 171364834 171364931 -31720601 + Charlie8 DNA MER1_type 1 99 -2318 649 133 0 0 chr5 171364939 171365044 -31720488 + L1MB3 LINE L1 6077 6181 -2 1140 177 73 0 chr5 171365046 171365238 -31720294 + AluJo SINE Alu 5 210 -102 1684 144 45 17 chr5 171365434 171365725 -31719807 - AluJo SINE Alu -13 299 1 2296 81 3 0 chr5 171365750 171366034 -31719498 + AluSq SINE Alu 1 285 -28 488 267 31 87 chr5 171366229 171366424 -31719108 - MLT1I LTR MaLR -9 400 217 * 941 173 25 51 chr5 171366419 171366616 -31718916 + MLT1A1 LTR MaLR 6 197 -168 263 269 26 0 chr5 171366809 171366887 -31718645 + MIR SINE MIR 102 181 -81 2027 135 0 56 chr5 171366899 171367218 -31718314 - AluSx SINE Alu -9 303 3 2322 113 0 0 chr5 171367415 171367716 -31717816 - AluSg SINE Alu -9 301 1 33 25 0 0 chr5 171367806 171367846 -31717686 + AT_rich Low_complexity Low_complexity 1 40 0 688 285 103 48 chr5 171367862 171368213 -31717319 - L1MD2 LINE L1 -302 5819 5470 670 124 0 0 chr5 171368813 171368918 -31716614 + L1MB3 LINE L1 6077 6181 -2 199 241 19 19 chr5 171369749 171369803 -31715729 + MIR SINE MIR 91 144 -118 2127 111 10 13 chr5 171369823 171370121 -31715411 - AluSx SINE Alu -15 297 1 454 258 170 0 chr5 171370196 171370378 -31715154 + MIR SINE MIR 47 259 -3 450 224 200 24 chr5 171370644 171370849 -31714683 + MIR SINE MIR 2 242 -20 30 0 0 0 chr5 171370961 171370991 -31714541 + AT_rich Low_complexity Low_complexity 1 30 0 1990 119 41 14 chr5 171370991 171371284 -31714248 - AluSx SINE Alu -11 301 1 1893 173 0 0 chr5 171371393 171371688 -31713844 + AluJo SINE Alu 1 295 -17 1638 185 38 0 chr5 171371861 171372148 -31713384 + AluJo SINE Alu 1 298 -14 573 267 32 53 chr5 171372374 171372621 -31712911 - L1MC4a LINE L1 -1873 5935 5694 284 307 123 43 chr5 171372781 171372993 -31712539 - L1MC4a LINE L1 -2000 5808 5567 2402 63 0 10 chr5 171372993 171373294 -31712238 + AluSx SINE Alu 2 299 -13 284 307 123 43 chr5 171373294 171373358 -31712174 - L1MC4a LINE L1 -2241 5567 5510 21 71 0 0 chr5 171375332 171375374 -31710158 + GC_rich Low_complexity Low_complexity 1 42 0 1235 174 157 7 chr5 171378904 171379185 -31706347 - L1MD3 LINE L1 -19 7976 7654 576 149 182 19 chr5 171379191 171379345 -31706187 - L1MD3 LINE L1 -382 7613 7435 585 190 19 17 chr5 171379355 171379482 -31706050 - MLT1F1 LTR MaLR -446 121 5 875 209 127 8 chr5 171379488 171379747 -31705785 - L1MD3 LINE L1 -729 7266 6977 30 27 0 0 chr5 171379759 171379796 -31705736 + AT_rich Low_complexity Low_complexity 1 37 0 620 151 11 0 chr5 171379796 171379889 -31705643 - AluJ/FLAM SINE Alu -212 100 7 599 227 54 22 chr5 171379898 171380083 -31705449 - L1MD3 LINE L1 -1020 6975 6785 296 225 50 0 chr5 171380548 171380628 -31704904 - L1MA10 LINE L1 0 6334 6251 737 146 39 31 chr5 171380633 171380763 -31704769 + FRAM SINE Alu 23 153 -23 397 219 37 45 chr5 171380765 171380959 -31704573 - L1MA10 LINE L1 -81 6244 5891 * 1929 198 86 35 chr5 171380952 171381476 -31704056 - L1ME LINE L1 -347 5819 5280 2192 100 0 0 chr5 171381476 171381756 -31703776 - AluSq SINE Alu -18 295 16 1929 198 86 35 chr5 171381756 171381804 -31703728 - L1ME LINE L1 -886 5280 5236 1799 119 36 0 chr5 171381930 171382181 -31703351 + AluSx SINE Alu 35 294 -18 1267 191 96 58 chr5 171382197 171382646 -31702886 - L1ME LINE L1 -900 5246 4781 423 232 42 0 chr5 171382802 171382897 -31702635 - MER94 DNA DNA 0 134 36 371 276 105 60 chr5 171382927 171383441 -31702091 - L1ME LINE L1 -363 5799 5263 1942 114 4 11 chr5 171383652 171383933 -31701599 - AluY SINE Alu -32 279 1 3995 141 45 26 chr5 171384070 171384800 -31700732 + Tigger2 DNA MER2_type 1 744 -1974 873 181 157 0 chr5 171384865 171385069 -31700463 + Tigger2 DNA MER2_type 2483 2718 0 274 272 37 0 chr5 171385306 171385387 -31700145 - MIR SINE MIR -109 153 70 2391 88 0 3 chr5 171385971 171386277 -31699255 - AluSg SINE Alu -5 305 1 1705 135 67 4 chr5 171386531 171386798 -31698734 - AluSx SINE Alu -15 297 14 2171 108 0 7 chr5 171386887 171387182 -31698350 - AluSc SINE Alu -16 293 1 30 0 0 0 chr5 171387185 171387215 -31698317 + AT_rich Low_complexity Low_complexity 1 30 0 1096 186 4 44 chr5 171387223 171387449 -31698083 - AluJo SINE Alu -19 293 77 468 95 0 0 chr5 171388209 171388272 -31697260 - Alu SINE Alu -254 64 2 2121 103 17 0 chr5 171389134 171389425 -31696107 + AluSg SINE Alu 3 298 -12 2012 120 0 52 chr5 171389971 171390279 -31695253 - AluSx SINE Alu -20 292 1 291 54 0 0 chr5 171390984 171391021 -31694511 + (TG)n Simple_repeat Simple_repeat 1 37 0 1540 151 46 0 chr5 171391048 171391287 -31694245 - AluJo SINE Alu -46 266 17 1187 181 9 125 chr5 171391491 171391660 -31693872 - AluJb SINE Alu -3 299 187 405 0 0 0 chr5 171391660 171391705 -31693827 + (TG)n Simple_repeat Simple_repeat 2 46 0 1187 181 9 125 chr5 171391705 171391872 -31693660 - AluJb SINE Alu -115 187 2 1424 126 14 0 chr5 171391874 171392081 -31693451 - AluSp SINE Alu -18 295 86 1027 167 21 16 chr5 171392722 171392908 -31692624 + AluJo SINE Alu 1 187 -125 281 59 176 0 chr5 171392909 171392960 -31692572 + AluSp/q SINE Alu 240 299 -4 624 118 0 0 chr5 171392991 171393076 -31692456 + AluJ/FRAM SINE Alu 214 298 -14 189 0 0 0 chr5 171393689 171393710 -31691822 + (TTA)n Simple_repeat Simple_repeat 2 22 0 346 236 75 0 chr5 171393979 171394085 -31691447 - L1MC4 LINE L1 -15 8027 7914 845 229 116 27 chr5 171394086 171394378 -31691154 - L1MC4 LINE L1 -196 7846 7529 1909 158 10 0 chr5 171394480 171394783 -31690749 - AluSx SINE Alu -6 306 1 443 166 47 60 chr5 171394826 171394952 -31690580 - L1MC4 LINE L1 -974 6898 6718 1401 184 19 55 chr5 171395433 171395743 -31689789 - AluJo SINE Alu -13 299 1 2062 132 0 0 chr5 171395946 171396233 -31689299 - AluSx SINE Alu -21 291 5 774 162 62 124 chr5 171396399 171396540 -31688992 - MER20 DNA MER1_type -6 213 88 1459 173 13 63 chr5 171396540 171396841 -31688691 + AluJb SINE Alu 1 286 -26 774 162 62 124 chr5 171396841 171396909 -31688623 - MER20 DNA MER1_type -131 88 17 1322 221 160 15 chr5 171397205 171397598 -31687934 - LTR40b LTR ERVL -10 452 3 232 259 0 17 chr5 171397719 171397777 -31687755 - MIR SINE MIR -160 102 46 2477 66 3 7 chr5 171397822 171398126 -31687406 + AluY SINE Alu 1 303 -8 341 265 88 83 chr5 171398968 171399091 -31686441 + MER5A DNA MER1_type 2 128 -61 2052 121 3 0 chr5 171399091 171399381 -31686151 - AluSx SINE Alu -8 304 14 341 265 88 83 chr5 171399381 171399438 -31686094 + MER5A DNA MER1_type 128 183 -6 428 155 19 203 chr5 171399462 171399727 -31685805 - L1MB2 LINE L1 -9 6162 5982 207 344 86 23 chr5 171400867 171400995 -31684537 - L2 LINE L2 0 3313 3178 985 190 6 0 chr5 171401023 171401186 -31684346 + AluJb SINE Alu 129 292 -20 313 306 177 16 chr5 171401227 171401475 -31684057 - L2 LINE L2 -677 2637 2350 1729 180 14 3 chr5 171401509 171401798 -31683734 + AluJo SINE Alu 1 292 -20 1797 176 3 7 chr5 171402229 171402524 -31683008 + AluJb SINE Alu 1 294 -18 22 35 0 0 chr5 171402899 171402928 -31682604 + AT_rich Low_complexity Low_complexity 1 29 0 1048 139 123 81 chr5 171403219 171403528 -31682004 - MER33 DNA MER1_type -1 323 2 23 0 0 0 chr5 171403717 171403740 -31681792 + AT_rich Low_complexity Low_complexity 1 23 0 308 292 35 0 chr5 171404042 171404155 -31681377 - MER94 DNA DNA -17 117 1 828 189 94 14 chr5 171404337 171404549 -31680983 - L1MB5 LINE L1 0 6174 5946 2170 135 0 6 chr5 171404631 171404943 -31680589 - AluSx SINE Alu -2 310 1 522 261 112 19 chr5 171405314 171405475 -31680057 + MIR SINE MIR 31 206 -56 1942 46 46 31 chr5 171405478 171405739 -31679793 + AluY SINE Alu 1 265 -46 1164 68 0 7 chr5 171405843 171406010 -31679522 + AluY SINE Alu 139 304 0 733 119 0 0 chr5 171406344 171406453 -31679079 - AluSg/x SINE Alu -5 305 197 294 119 34 34 chr5 171406453 171406512 -31679020 + AluSp/q SINE Alu 244 302 -1 2175 114 0 10 chr5 171406550 171406848 -31678684 - AluSg SINE Alu -15 295 1 577 215 66 0 chr5 171409556 171409677 -31675855 - FLAM_A SINE Alu -4 129 1 214 308 42 42 chr5 171409948 171410068 -31675464 - MIR SINE MIR -75 187 68 21 0 0 0 chr5 171410369 171410390 -31675142 + AT_rich Low_complexity Low_complexity 1 21 0 1868 166 3 7 chr5 171411651 171411959 -31673573 + AluJo SINE Alu 5 311 -1 230 350 98 24 chr5 171412912 171413035 -31672497 + L2 LINE L2 3097 3228 -44 240 213 222 9 chr5 171413355 171413463 -31672069 + L2 LINE L2 2397 2527 -787 197 298 53 32 chr5 171413504 171413598 -31671934 + L2 LINE L2 2633 2728 -586 368 231 259 0 chr5 171413608 171413716 -31671816 + L2 LINE L2 3137 3272 0 192 77 0 0 chr5 171415743 171415769 -31669763 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 724 197 16 0 chr5 171416267 171416394 -31669138 + FLAM_A SINE Alu 5 133 0 268 308 51 0 chr5 171416568 171416646 -31668886 - MER91C DNA MER1_type -25 115 34 353 264 204 36 chr5 171417069 171417289 -31668243 + Charlie8 DNA MER1_type 4 260 -2157 181 317 211 28 chr5 171417427 171417569 -31667963 + L3 LINE CR1 1337 1504 -73 203 0 0 36 chr5 171418106 171418134 -31667398 + (TAAAAA)n Simple_repeat Simple_repeat 3 29 0 235 156 89 0 chr5 171418283 171418328 -31667204 - L2 LINE L2 -4 3268 3220 195 356 14 0 chr5 171418379 171418452 -31667080 - L2 LINE L2 0 3313 3240 547 315 85 85 chr5 171418515 171419133 -31666399 - L2 LINE L2 -3 3269 2648 826 130 15 8 chr5 171419133 171419264 -31666268 + FLAM_C SINE Alu 1 132 -11 417 252 15 0 chr5 171420182 171420292 -31665240 - MIR SINE MIR -84 124 11 387 295 144 23 chr5 171423515 171423688 -31661844 + MIR3 SINE MIR 14 207 -1 2329 99 0 10 chr5 171425122 171425426 -31660106 + AluSq SINE Alu 1 301 -12 244 382 38 8 chr5 171426660 171426791 -31658741 + MIR3 SINE MIR 39 173 -35 233 356 23 0 chr5 171477795 171477882 -31607650 - MIR SINE MIR -77 131 43 1434 176 63 30 chr5 171478200 171478563 -31606969 + MER113 DNA MER1_type? 29 403 -118 248 257 28 9 chr5 171479327 171479436 -31606096 + (TATG)n Simple_repeat Simple_repeat 4 114 0 446 211 65 41 chr5 171479613 171479736 -31605796 + MIR3 SINE MIR 81 206 -2 185 254 32 103 chr5 171480383 171480509 -31605023 - L2 LINE L2 -212 3060 2944 678 295 72 41 chr5 171480858 171481102 -31604430 + L1MC/D LINE L1 4358 4593 -1553 2618 49 0 13 chr5 171481102 171481409 -31604123 - AluY SINE Alu -8 303 1 678 295 72 41 chr5 171481409 171481819 -31603713 + L1MC/D LINE L1 4593 5032 -1114 875 264 93 48 chr5 171481840 171482261 -31603271 + L1MC/D LINE L1 5375 5814 -1994 21 36 0 0 chr5 171482291 171482319 -31603213 + AT_rich Low_complexity Low_complexity 1 28 0 2277 92 7 23 chr5 171482924 171483228 -31602304 + AluSx SINE Alu 1 299 -13 765 162 0 7 chr5 171483358 171483500 -31602032 - L1PA16 LINE L1 0 6166 6026 257 238 220 33 chr5 171483514 171483728 -31601804 + L3 LINE CR1 1095 1348 -229 668 183 8 0 chr5 171483818 171483938 -31601594 + L1PA16 LINE L1 6026 6146 -20 280 297 81 9 chr5 171483938 171484049 -31601483 + L3 LINE CR1 1422 1540 -37 * 533 278 160 27 chr5 171484047 171484378 -31601154 - L2 LINE L2 -9 3304 2930 292 366 27 14 chr5 171484382 171484603 -31600929 - L2 LINE L2 -561 2753 2530 1640 190 0 11 chr5 171484741 171485020 -31600512 - AluJo SINE Alu -36 276 1 711 101 0 0 chr5 171485150 171485239 -31600293 - 5S rRNA rRNA -32 89 1 453 286 24 0 chr5 171485384 171485510 -31600022 + MIR SINE MIR 16 144 -118 185 254 17 17 chr5 171485875 171485934 -31599598 - L2 LINE L2 -567 2747 2689 269 259 141 0 chr5 171486189 171486274 -31599258 + MLT1I LTR MaLR 47 143 -266 1900 175 51 3 chr5 171486303 171486478 -31599054 + MLT1B LTR MaLR 1 166 -224 210 37 0 0 chr5 171486478 171486505 -31599027 + (TC)n Simple_repeat Simple_repeat 2 28 0 1900 175 51 3 chr5 171486505 171486701 -31598831 + MLT1B LTR MaLR 166 390 0 319 238 78 58 chr5 171486777 171486916 -31598616 + MLT1I LTR MaLR 284 396 -13 263 50 33 50 chr5 171487024 171487084 -31598448 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 2140 122 80 21 chr5 171487114 171487451 -31598081 + THE1B LTR MaLR 8 364 0 11760 87 7 28 chr5 171487451 171488879 -31596653 + THE1B-int LTR MaLR 1 1393 -187 2024 122 12 40 chr5 171488879 171489200 -31596332 - AluSx SINE Alu 0 312 1 11760 87 7 28 chr5 171489200 171489385 -31596147 + THE1B-int LTR MaLR 1393 1580 0 2132 129 51 28 chr5 171489385 171489741 -31595791 + THE1B LTR MaLR 1 364 0 244 236 18 0 chr5 171489892 171489947 -31595585 - MIR SINE MIR -132 76 21 231 61 0 0 chr5 171490142 171490175 -31595357 + (TC)n Simple_repeat Simple_repeat 1 33 0 265 331 0 16 chr5 171490291 171490418 -31595114 + (CATATA)n Simple_repeat Simple_repeat 3 127 0 242 309 0 10 chr5 171490490 171490587 -31594945 + (CATATA)n Simple_repeat Simple_repeat 6 101 0 1794 152 6 55 chr5 171490852 171491180 -31594352 - AluJb SINE Alu 0 312 1 335 248 70 70 chr5 171491528 171491657 -31593875 + MIR3 SINE MIR 9 137 -71 612 265 17 33 chr5 171491758 171491972 -31593560 + MIR SINE MIR 40 249 -13 258 364 10 0 chr5 171492174 171492273 -31593259 + MIR3 SINE MIR 78 177 -31 800 199 99 6 chr5 171492383 171492564 -31592968 + MER6B DNA MER2_type 4 201 -9 256 326 128 0 chr5 171492950 171493113 -31592419 + MIR SINE MIR 2 181 -62 412 225 106 14 chr5 171493211 171493353 -31592179 - MIR SINE MIR -29 233 79 327 261 75 30 chr5 171494078 171494212 -31591320 - L2 LINE L2 -1 3312 3173 407 293 130 38 chr5 171494433 171494825 -31590707 - L2 LINE L2 -344 2970 2543 301 241 28 48 chr5 171494972 171495117 -31590415 - L1ME4a LINE L1 -21 6100 5959 547 314 43 19 chr5 171496318 171496528 -31589004 - MIR SINE MIR -43 219 5 310 315 83 0 chr5 171496892 171497000 -31588532 - MIR SINE MIR -109 153 37 265 298 11 0 chr5 171497174 171497268 -31588264 + MIR SINE MIR 40 134 -74 468 294 16 22 chr5 171497418 171497602 -31587930 + MER5A DNA MER1_type 7 189 0 486 265 8 8 chr5 171497632 171497764 -31587768 - L3 LINE CR1 -115 1462 1331 255 287 124 16 chr5 171498203 171498332 -31587200 - MIR3 SINE MIR -12 196 54 194 88 0 29 chr5 171498932 171498966 -31586566 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 196 312 143 13 chr5 171498989 171499066 -31586466 + MIR SINE MIR 37 123 -139 223 319 14 0 chr5 171499089 171499158 -31586374 - L2 LINE L2 0 3272 3203 727 281 99 19 chr5 171499311 171499624 -31585908 + MER102b DNA MER1_type 1 338 -3 761 256 94 75 chr5 171500219 171500539 -31584993 + MER102a DNA MER1_type 2 327 -3 370 281 0 26 chr5 171500755 171500869 -31584663 - MIR SINE MIR -55 153 43 373 283 38 0 chr5 171500971 171501077 -31584455 + MER117 DNA MER1_type 84 193 -4 729 0 0 0 chr5 171502129 171502210 -31583322 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 4853 47 0 0 chr5 171502211 171502786 -31582746 - L1PA8 LINE L1 -20 6152 5578 237 65 0 0 chr5 171502985 171503016 -31582516 + (TG)n Simple_repeat Simple_repeat 2 32 0 323 330 92 26 chr5 171503056 171503402 -31582130 + L2 LINE L2 2124 2492 -822 272 258 56 34 chr5 171503492 171503581 -31581951 + L2 LINE L2 3182 3272 0 208 275 28 18 chr5 171503849 171503958 -31581574 + (TATG)n Simple_repeat Simple_repeat 1 110 0 552 270 194 14 chr5 171504229 171504440 -31581092 + MIR SINE MIR 1 249 -13 282 29 0 0 chr5 171504460 171504495 -31581037 + (TG)n Simple_repeat Simple_repeat 1 35 0 847 191 96 0 chr5 171505585 171505742 -31579790 - MER96 DNA MER1_type -3 172 1 391 218 68 53 chr5 171505897 171506030 -31579502 - MIR SINE MIR -11 251 117 333 167 0 0 chr5 171506325 171506379 -31579153 + L2 LINE L2 3217 3270 -2 492 265 106 16 chr5 171507227 171507416 -31578116 - MIR SINE MIR -55 207 2 558 273 40 28 chr5 171508153 171508329 -31577203 - MIR SINE MIR 0 262 85 242 191 59 44 chr5 171508998 171509066 -31576466 - MIR SINE MIR -109 153 85 * 395 314 64 32 chr5 171509064 171509252 -31576280 - MIR SINE MIR -7 255 62 273 270 43 43 chr5 171509734 171509849 -31575683 + MIR SINE MIR 34 138 -70 608 280 98 8 chr5 171509915 171510158 -31575374 + MIR SINE MIR 10 256 -6 362 225 120 21 chr5 171510508 171510650 -31574882 - L1ME4a LINE L1 -1 6120 5965 599 227 140 67 chr5 171510656 171510956 -31574576 - L1ME4a LINE L1 -204 5917 5596 568 245 85 21 chr5 171511410 171511598 -31573934 + MIR SINE MIR 63 262 0 433 349 15 0 chr5 171511755 171511887 -31573645 + L3 LINE CR1 1071 1204 -373 318 269 96 44 chr5 171512052 171512290 -31573242 - MIR SINE MIR -2 260 11 491 279 87 29 chr5 171512294 171512466 -31573066 + L3 LINE CR1 1290 1471 -106 350 258 75 0 chr5 171512509 171512602 -31572930 + MIR SINE MIR 49 148 -114 200 151 0 38 chr5 171513438 171513491 -31572041 + GA-rich Low_complexity Low_complexity 1 51 0 294 306 168 29 chr5 171513886 171514059 -31571473 - MIR3 SINE MIR -8 200 4 556 275 7 0 chr5 171514411 171514553 -31570979 + MIR SINE MIR 116 258 -4 25 0 0 0 chr5 171514562 171514587 -31570945 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 171515008 171515038 -31570494 + AT_rich Low_complexity Low_complexity 1 30 0 297 296 118 0 chr5 171515198 171515333 -31570199 + MIR3 SINE MIR 43 193 -15 21 0 0 0 chr5 171515716 171515737 -31569795 + AT_rich Low_complexity Low_complexity 1 21 0 315 302 70 28 chr5 171515747 171515962 -31569570 - L1ME4a LINE L1 -16 6105 5882 367 241 0 13 chr5 171516032 171516111 -31569421 + MIR SINE MIR 62 139 -69 522 279 35 15 chr5 171516238 171516439 -31569093 + L2 LINE L2 3108 3312 -1 395 244 15 37 chr5 171516864 171516999 -31568533 - MIR SINE MIR -74 188 57 2461 68 0 10 chr5 171517032 171517339 -31568193 - AluY SINE Alu -7 304 1 452 260 16 24 chr5 171518622 171518745 -31566787 - MIR SINE MIR -110 152 31 241 265 120 8 chr5 171518999 171519116 -31566416 + L1MC4a LINE L1 5805 5934 -1874 715 258 133 9 chr5 171519125 171519358 -31566174 + MIR SINE MIR 1 262 0 724 285 23 43 chr5 171520411 171520667 -31564865 + MIR SINE MIR 12 262 0 596 296 46 36 chr5 171520748 171521090 -31564442 + L1MC4a LINE L1 5576 5920 -244 247 146 36 0 chr5 171521114 171521169 -31564363 + (TA)n Simple_repeat Simple_repeat 2 58 0 315 248 15 136 chr5 171521536 171521734 -31563798 + MIR SINE MIR 35 208 -54 192 282 254 0 chr5 171522494 171522565 -31562967 + MIR SINE MIR 64 152 -56 488 210 210 7 chr5 171522620 171522763 -31562769 + MER5A DNA MER1_type 18 189 0 215 286 24 24 chr5 171522774 171522858 -31562674 - MER5A DNA MER1_type -44 145 62 917 168 39 95 chr5 171522869 171523101 -31562431 - L1MA10 LINE L1 -1 6333 6115 547 286 26 69 chr5 171524163 171524394 -31561138 - L3 LINE CR1 -72 1505 1285 481 328 65 16 chr5 171525073 171525259 -31560273 - MIR3 SINE MIR -10 198 4 190 448 11 11 chr5 171525651 171525832 -31559700 - MIR3 SINE MIR -19 189 9 885 179 82 53 chr5 171526779 171526986 -31558546 + MER20 DNA MER1_type 3 215 -4 194 270 63 0 chr5 171527899 171527962 -31557570 - L3b LINE CR1 -198 1385 1319 236 288 0 15 chr5 171528260 171528326 -31557206 + L3 LINE CR1 1390 1454 -123 600 274 43 6 chr5 171528612 171528776 -31556756 - MIR SINE MIR -79 183 14 190 107 0 0 chr5 171529313 171529341 -31556191 - MIR SINE MIR -117 145 118 184 128 26 26 chr5 171529972 171530011 -31555521 + L2 LINE L2 3274 3312 -1 548 101 0 13 chr5 171530810 171530889 -31554643 - MADE1 DNA Mariner -2 78 1 284 272 95 34 chr5 171531204 171531351 -31554181 + MIR SINE MIR 6 161 -101 22 56 0 0 chr5 171532161 171532197 -31553335 + AT_rich Low_complexity Low_complexity 1 36 0 696 286 33 29 chr5 171532212 171532457 -31553075 - MIR SINE MIR -11 251 6 289 320 10 0 chr5 171532505 171532605 -31552927 - MIR SINE MIR -13 249 149 399 289 23 31 chr5 171533206 171533334 -31552198 - MIR SINE MIR -63 145 19 315 297 24 24 chr5 171533800 171533965 -31551567 + L1ME3A LINE L1 5793 5957 -213 33 0 0 0 chr5 171534222 171534255 -31551277 + AT_rich Low_complexity Low_complexity 1 33 0 2463 78 0 3 chr5 171534265 171534571 -31550961 + AluY SINE Alu 1 305 -6 254 268 31 41 chr5 171534903 171535000 -31550532 + MLT1K LTR MaLR 160 255 -333 800 204 67 44 chr5 171535226 171535451 -31550081 + LTR67 LTR ERVL 320 549 -8 235 350 68 34 chr5 171535765 171535882 -31549650 - MIR SINE MIR -63 145 25 1103 259 68 0 chr5 171535919 171536155 -31549377 - MIR SINE MIR -4 258 7 488 179 38 0 chr5 171537430 171537536 -31547996 + L1MB7 LINE L1 6072 6181 -3 384 310 175 5 chr5 171537808 171538008 -31547524 + MIR SINE MIR 20 253 -9 404 336 42 7 chr5 171538586 171538729 -31546803 + MIR3 SINE MIR 18 165 -43 1219 266 39 12 chr5 171539134 171539465 -31546067 + MLT1C LTR MaLR 125 464 -3 527 255 131 7 chr5 171539480 171539633 -31545899 + MER117 DNA MER1_type 25 196 -1 198 295 219 31 chr5 171540676 171540900 -31544632 + L2 LINE L2 2537 2802 -512 422 230 267 0 chr5 171540940 171541127 -31544405 - MER5C DNA MER1_type -87 237 1 328 292 40 121 chr5 171541237 171541658 -31543874 + L2 LINE L2 2920 3306 -7 295 273 71 0 chr5 171542271 171542370 -31543162 + MIR3 SINE MIR 70 175 -33 291 272 130 0 chr5 171542453 171542545 -31542987 - L2 LINE L2 0 3272 3169 337 235 165 0 chr5 171542936 171543051 -31542481 + L2 LINE L2 3180 3313 0 218 310 121 0 chr5 171543984 171544042 -31541490 + L2 LINE L2 3208 3272 -41 464 356 113 0 chr5 171544131 171544353 -31541179 - MIR SINE MIR -8 254 8 519 258 23 135 chr5 171544509 171544769 -31540763 + L2 LINE L2 3028 3258 -14 259 200 0 0 chr5 171545584 171545629 -31539903 + MIR SINE MIR 41 85 -123 586 172 0 0 chr5 171545715 171545802 -31539730 + AluJ/FLAM SINE Alu 2 88 -224 975 327 98 55 chr5 171545827 171546833 -31538699 - L2 LINE L2 -2 3270 2218 355 247 93 10 chr5 171547059 171547156 -31538376 - MIR SINE MIR -113 149 45 219 265 214 0 chr5 171547531 171547629 -31537903 + MIR SINE MIR 71 189 -73 292 253 0 36 chr5 171548069 171548152 -31537380 - MIR SINE MIR -3 259 180 463 315 50 29 chr5 171548488 171548726 -31536806 - MIR SINE MIR -5 257 15 187 250 0 45 chr5 171548714 171548758 -31536774 - L3 LINE CR1 -30 1547 1506 * 399 90 0 60 chr5 171548833 171548900 -31536632 - L1PA7 LINE L1 0 6154 6092 419 234 0 11 chr5 171549283 171549377 -31536155 + MIR3 SINE MIR 106 198 -10 847 313 60 24 chr5 171549862 171550277 -31535255 + MLT1K LTR MaLR 159 588 0 877 296 113 35 chr5 171550665 171551379 -31534153 + L2 LINE L2 2531 3313 0 301 271 115 21 chr5 171552091 171552187 -31533345 + L2 LINE L2 3160 3264 -49 281 349 33 26 chr5 171552533 171552685 -31532847 + MIR3 SINE MIR 54 206 -2 523 265 245 15 chr5 171552849 171553053 -31532479 + MIR SINE MIR 7 257 -5 552 279 34 22 chr5 171553331 171553510 -31532022 - MIR3 SINE MIR -15 193 13 1030 187 8 51 chr5 171553532 171553595 -31531937 + MER97b DNA MER1_type? 27 91 -962 2134 109 3 7 chr5 171553595 171553931 -31531601 - AluSx SINE Alu 0 335 1 1030 187 8 51 chr5 171553931 171554101 -31531431 + MER97b DNA MER1_type? 91 251 -802 1852 224 73 48 chr5 171554117 171554468 -31531064 + MER97a DNA MER1_type? 364 734 -160 891 194 0 19 chr5 171554468 171554623 -31530909 + FRAM SINE Alu 2 153 -13 1852 224 73 48 chr5 171554623 171554789 -31530743 + MER97a DNA MER1_type? 734 894 0 652 294 72 21 chr5 171555355 171555590 -31529942 - MIR SINE MIR -7 255 9 386 273 28 28 chr5 171556203 171556346 -31529186 + MIR SINE MIR 112 254 -8 212 353 39 49 chr5 171556456 171556558 -31528974 + MIR SINE MIR 33 133 -75 217 259 36 80 chr5 171556672 171556784 -31528748 - MIR SINE MIR -72 136 30 507 239 168 13 chr5 171557097 171557252 -31528280 - MER5A DNA MER1_type -2 187 9 360 271 42 10 chr5 171557512 171557608 -31527924 + MIR3 SINE MIR 10 108 -100 282 234 280 9 chr5 171558155 171558262 -31527270 + MIR3 SINE MIR 11 146 -62 372 262 113 0 chr5 171558264 171558405 -31527127 - MIR SINE MIR 0 262 106 864 153 0 29 chr5 171558442 171558579 -31526953 - FLAM_A SINE Alu 0 133 1 214 334 0 25 chr5 171559774 171559854 -31525678 + MIR SINE MIR 75 151 -65 * 222 305 0 0 chr5 171559851 171559910 -31525622 - MIR SINE MIR -1 261 203 275 310 48 55 chr5 171559919 171560064 -31525468 + L3 LINE CR1 1170 1313 -264 527 300 82 5 chr5 171560068 171560288 -31525244 + MIR SINE MIR 20 256 -6 283 362 32 0 chr5 171560599 171560693 -31524839 + L2 LINE L2 3157 3253 -19 610 270 65 84 chr5 171560811 171561166 -31524366 + L2 LINE L2 2187 2534 -780 514 179 0 42 chr5 171561168 171561263 -31524269 + MER2 DNA MER2_type 2 92 -253 1590 170 91 0 chr5 171561268 171561544 -31523988 + AluJb SINE Alu 1 301 -11 5680 137 44 65 chr5 171561544 171562632 -31522900 + L1PB1 LINE L1 7 1071 -5792 15418 189 13 8 chr5 171562634 171566687 -31518845 + L1PB1 LINE L1 2454 6510 -357 420 71 0 0 chr5 171566687 171566743 -31518789 + (CA)n Simple_repeat Simple_repeat 2 57 0 15418 189 13 8 chr5 171566743 171566864 -31518668 + L1PB1 LINE L1 6510 6629 -238 241 270 0 0 chr5 171569401 171569464 -31516068 + G-rich Low_complexity Low_complexity 1 63 0 192 77 0 0 chr5 171569973 171569999 -31515533 + (T)n Simple_repeat Simple_repeat 1 26 0 211 263 129 74 chr5 171571171 171571307 -31514225 - MIR3 SINE MIR -67 141 9 26 50 0 0 chr5 171571786 171571826 -31513706 + AT_rich Low_complexity Low_complexity 1 40 0 257 235 88 29 chr5 171571832 171571934 -31513598 - MIR SINE MIR -3 259 152 207 344 0 0 chr5 171572051 171572141 -31513391 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 1621 249 68 29 chr5 171573068 171573557 -31511975 - L2 LINE L2 -1 3312 2805 252 217 33 0 chr5 171573589 171573649 -31511883 - L2 LINE L2 -655 2659 2598 251 273 132 33 chr5 171573650 171573771 -31511761 - MIR3 SINE MIR -38 170 38 253 325 18 18 chr5 171573845 171573959 -31511573 + L2 LINE L2 3200 3313 0 180 0 0 0 chr5 171574340 171574360 -31511172 + (T)n Simple_repeat Simple_repeat 1 20 0 190 354 125 10 chr5 171574503 171574599 -31510933 - MIR3 SINE MIR -87 121 15 1951 136 30 0 chr5 171574878 171575179 -31510353 - AluSq SINE Alu -1 312 3 215 258 0 65 chr5 171575300 171575362 -31510170 - L2 LINE L2 -1 3271 3214 198 238 0 0 chr5 171575390 171575432 -31510100 - L2 LINE L2 -9 3304 3263 331 215 123 54 chr5 171575586 171575716 -31509816 - L1ME3 LINE L1 -110 6052 5914 671 310 82 4 chr5 171575721 171576272 -31509260 - L1MEc LINE L1 -2420 3795 3202 450 264 7 7 chr5 171576363 171576511 -31509021 - L1MEc LINE L1 -3137 3078 2931 * 535 266 84 69 chr5 171576505 171577276 -31508256 - L1MEc LINE L1 -4828 1568 786 2317 160 121 25 chr5 171577691 171578172 -31507360 - L1MD3 LINE L1 -60 7935 7409 469 165 12 24 chr5 171578177 171578262 -31507270 - MLT1F1 LTR MaLR -442 125 42 489 356 130 7 chr5 171579078 171579362 -31506170 + L2 LINE L2 2976 3294 -19 413 310 65 19 chr5 171579375 171579587 -31505945 - MIR SINE MIR -9 253 30 782 320 83 63 chr5 171579797 171580366 -31505166 + MLT1K LTR MaLR 9 588 0 219 323 0 42 chr5 171581023 171581119 -31504413 - MIR SINE MIR -72 190 99 752 164 0 55 chr5 171581232 171581360 -31504172 + FLAM_C SINE Alu 1 121 -12 194 0 39 0 chr5 171581484 171581510 -31504022 + (TTTTTA)n Simple_repeat Simple_repeat 3 29 0 3218 14 0 0 chr5 171581514 171581859 -31503673 - L1PA2 LINE L1 -6 6149 5805 1391 96 0 0 chr5 171581859 171582057 -31503475 + L1P LINE L1 1172 1369 -4777 699 286 102 34 chr5 171582227 171582552 -31502980 + L3 LINE CR1 1214 1560 -17 730 267 160 0 chr5 171582656 171582881 -31502651 + MIR SINE MIR 2 262 0 322 263 162 0 chr5 171583668 171583767 -31501765 - MIR SINE MIR -95 167 53 21 57 0 0 chr5 171583845 171583880 -31501652 + AT_rich Low_complexity Low_complexity 1 35 0 264 307 51 29 chr5 171583951 171584088 -31501444 - MIR SINE MIR -73 189 50 442 316 102 5 chr5 171584739 171584935 -31500597 + MIR SINE MIR 7 221 -41 269 262 0 0 chr5 171585010 171585071 -31500461 + L2 LINE L2 3227 3287 -26 620 283 17 51 chr5 171585092 171585329 -31500203 - MIR SINE MIR -12 250 22 254 338 0 0 chr5 171585349 171585429 -31500103 - L2 LINE L2 0 3272 3193 2407 130 5 23 chr5 171585430 171585814 -31499718 + L1PA8 LINE L1 5794 6170 -2 2496 65 7 0 chr5 171587363 171587672 -31497860 - AluY SINE Alu 0 311 1 2321 108 0 0 chr5 171587672 171587969 -31497563 - AluSx SINE Alu -15 297 1 1072 268 59 59 chr5 171588347 171588859 -31496673 - MER113 DNA MER1_type? -6 515 4 1650 203 59 0 chr5 171588950 171589271 -31496261 + MER58B DNA MER1_type 1 340 -1 557 302 13 0 chr5 171589289 171589438 -31496094 + MIR SINE MIR 34 184 -78 2682 68 6 0 chr5 171589628 171589954 -31495578 - L1PA6 LINE L1 0 6154 5827 536 321 26 5 chr5 171590382 171590572 -31494960 - MIR SINE MIR -12 250 57 592 299 53 37 chr5 171590623 171590867 -31494665 + L2 LINE L2 3025 3272 0 1890 215 52 9 chr5 171591120 171591586 -31493946 + MER113 DNA MER1_type? 1 486 -35 286 325 166 10 chr5 171592355 171592575 -31492957 - MIR SINE MIR -8 254 1 264 254 91 27 chr5 171593335 171593445 -31492087 + MIR3 SINE MIR 42 158 -50 565 254 127 24 chr5 171593958 171594171 -31491361 + MIR SINE MIR 14 248 -14 2007 191 28 3 chr5 171594484 171594840 -31490692 + MLT1A1 LTR MaLR 1 365 0 460 261 0 55 chr5 171594904 171595065 -31490467 + MIR SINE MIR 15 162 -46 343 256 176 8 chr5 171595481 171595606 -31489926 - MIR3 SINE MIR -49 159 14 207 257 184 28 chr5 171596317 171596426 -31489106 - L2 LINE L2 -4 3309 3184 184 304 89 0 chr5 171596488 171596544 -31488988 - L2 LINE L2 -4 3309 3249 308 254 119 18 chr5 171596697 171596828 -31488704 - MIR SINE MIR -58 150 30 241 281 183 12 chr5 171597164 171597328 -31488204 + MIR SINE MIR 65 256 -6 722 238 128 74 chr5 171597645 171598238 -31487294 - L1MC5 LINE L1 -35 7926 7302 326 287 9 0 chr5 171598365 171598473 -31487059 - L1MC4 LINE L1 -794 7248 7140 183 344 89 0 chr5 171598603 171598693 -31486839 + MER5A DNA MER1_type 24 121 -68 229 256 67 56 chr5 171599249 171599339 -31486193 - MER5A DNA MER1_type -43 146 56 201 274 0 0 chr5 171599502 171599553 -31485979 + MIR3 SINE MIR 151 201 -7 264 291 13 0 chr5 171599607 171599686 -31485846 + MLT1K LTR MaLR 151 230 -358 206 328 129 35 chr5 171599933 171600049 -31485483 - L2 LINE L2 -31 3241 3115 901 283 60 52 chr5 171600236 171600639 -31484893 - MLT1K LTR MaLR -32 556 151 299 65 22 0 chr5 171600813 171600859 -31484673 + (CA)n Simple_repeat Simple_repeat 1 47 0 674 283 54 17 chr5 171601989 171602229 -31483303 + MIR SINE MIR 8 256 -6 1137 180 5 32 chr5 171602440 171602657 -31482875 + AluJb SINE Alu 87 297 -15 450 285 51 7 chr5 171602659 171602796 -31482736 + MIR3 SINE MIR 26 168 -40 2514 80 17 20 chr5 171603787 171604136 -31481396 + THE1B LTR MaLR 17 364 0 401 301 108 0 chr5 171604169 171604335 -31481197 + MIR SINE MIR 79 262 0 923 307 100 39 chr5 171604599 171605023 -31480509 + L3 LINE CR1 898 1363 -214 1599 75 0 10 chr5 171605023 171605222 -31480310 - MER107 DNA MER1_type 0 197 1 923 307 100 39 chr5 171605222 171605337 -31480195 + L3 LINE CR1 1363 1470 -107 305 293 176 11 chr5 171605348 171605536 -31479996 + MIR SINE MIR 2 220 -42 352 309 131 24 chr5 171606022 171606190 -31479342 - MIR3 SINE MIR -7 201 16 323 283 101 23 chr5 171606188 171606376 -31479156 + MIR SINE MIR 33 238 -24 * 540 150 0 0 chr5 171606543 171606623 -31478909 + MADE1 DNA Mariner 1 80 0 1276 147 27 49 chr5 171606939 171607163 -31478369 + MER20 DNA MER1_type 1 219 0 229 274 143 0 chr5 171607309 171607393 -31478139 + MER117 DNA MER1_type 34 129 -68 798 236 11 11 chr5 171607393 171607575 -31477957 + MIR SINE MIR 56 237 -25 744 256 65 13 chr5 171608056 171608286 -31477246 + MER102b DNA MER1_type 50 291 -50 283 299 41 10 chr5 171608483 171608580 -31476952 - MIR SINE MIR -109 153 54 602 348 6 0 chr5 171609414 171609595 -31475937 + MIR3 SINE MIR 19 200 -8 406 286 142 37 chr5 171610149 171610398 -31475134 - L3 LINE CR1 -109 1468 1176 2584 40 0 7 chr5 171610398 171610699 -31474833 - AluY SINE Alu -12 299 1 406 286 142 37 chr5 171610699 171610774 -31474758 - L3 LINE CR1 -401 1176 1110 383 297 40 0 chr5 171610776 171610877 -31474655 - L2 LINE L2 0 3272 3168 520 326 48 35 chr5 171610912 171611142 -31474390 + MIR SINE MIR 30 262 0 658 264 40 44 chr5 171611215 171611533 -31473999 - L2 LINE L2 -214 3058 2741 4219 109 11 32 chr5 171611533 171611991 -31473541 - MER4B LTR ERV1 0 610 167 2156 131 0 0 chr5 171611991 171612289 -31473243 - AluSx SINE Alu -14 298 1 4219 109 11 32 chr5 171612289 171612453 -31473079 - MER4B LTR ERV1 -443 167 1 658 264 40 44 chr5 171612453 171612514 -31473018 - L2 LINE L2 -531 2741 2681 307 376 23 0 chr5 171612510 171612643 -31472889 - L3 LINE CR1 -505 1072 937 * 4957 153 18 20 chr5 171613383 171614230 -31471302 - L1MA9 LINE L1 -15 6297 5453 429 212 227 8 chr5 171614366 171614498 -31471034 + MER5A DNA MER1_type 26 186 -3 288 352 63 21 chr5 171615042 171615184 -31470348 - L2 LINE L2 0 3272 3125 2365 95 0 0 chr5 171615437 171615741 -31469791 - AluSc SINE Alu -5 304 1 282 269 0 0 chr5 171615934 171616001 -31469531 + CT-rich Low_complexity Low_complexity 2 68 0 510 310 72 83 chr5 171616001 171616632 -31468900 - L2 LINE L2 -49 3223 2592 2408 65 3 0 chr5 171617137 171617428 -31468104 + AluY SINE Alu 1 292 -19 269 241 207 48 chr5 171617595 171617740 -31467792 - MIR3 SINE MIR -3 205 38 203 307 45 11 chr5 171618241 171618329 -31467203 + MIR SINE MIR 153 243 -19 763 286 44 7 chr5 171618399 171618648 -31466884 - MIR SINE MIR -12 250 5 648 186 21 112 chr5 171618704 171618892 -31466640 - MER5B DNA MER1_type 0 178 8 571 300 99 8 chr5 171619108 171619351 -31466181 - Charlie8 DNA MER1_type -2152 265 1 338 317 39 10 chr5 171619617 171619721 -31465811 - MER5A DNA MER1_type -40 149 43 270 333 39 23 chr5 171619618 171619747 -31465785 + MER5A DNA MER1_type 52 182 -7 * 402 296 89 35 chr5 171619913 171620261 -31465271 - L1ME LINE L1 -461 5660 5294 553 315 98 32 chr5 171620794 171621292 -31464240 - L1ME LINE L1 -3012 3134 2604 24 32 0 0 chr5 171621452 171621483 -31464049 + AT_rich Low_complexity Low_complexity 1 31 0 1632 176 3 17 chr5 171621483 171621778 -31463754 - AluJb SINE Alu -21 291 1 5381 137 17 35 chr5 171622343 171623285 -31462247 - L1MA5 LINE L1 -2 7360 6436 * 15145 201 17 13 chr5 171623283 171628071 -31457461 - L1PB1 LINE L1 -2 6865 1937 8033 32 7 9 chr5 171628071 171629259 -31456273 - L1PA4 LINE L1 0 6155 4969 15145 201 17 13 chr5 171629259 171629889 -31455643 - L1PB1 LINE L1 -4930 1937 1311 3860 229 66 19 chr5 171629895 171630016 -31455516 - L1PB1 LINE L1 -5709 1154 1040 2280 114 10 0 chr5 171630016 171630324 -31455208 - AluSx SINE Alu 0 312 2 3860 229 66 19 chr5 171630324 171631300 -31454232 - L1PB1 LINE L1 -5823 1040 6 9529 169 64 21 chr5 171631337 171632072 -31453460 - L1MA5 LINE L1 -759 6449 5747 1632 196 21 7 chr5 171632072 171632363 -31453169 - AluJo SINE Alu -17 295 1 9529 169 64 21 chr5 171632363 171633337 -31452195 - L1MA5 LINE L1 -1461 5747 4632 2020 123 0 0 chr5 171633337 171633613 -31451919 + AluSg SINE Alu 20 295 -15 9529 169 64 21 chr5 171633613 171633995 -31451537 - L1MA5 LINE L1 -2576 4632 4268 44527 45 4 0 chr5 171634005 171640138 -31445394 + L1PA4 LINE L1 3 6152 -3 6196 201 39 39 chr5 171640154 171640568 -31444964 - L1MA5 LINE L1 -2951 4257 3844 306 107 36 36 chr5 171640568 171640624 -31444908 - MER41A LTR ERV1 -99 455 400 6196 201 39 39 chr5 171640624 171642754 -31442778 - L1MA5 LINE L1 -3364 3844 1616 1418 314 52 15 chr5 171642971 171643570 -31441962 - L1MA5 LINE L1 -6204 1005 208 1640 193 3 7 chr5 171644016 171644306 -31441226 + AluJb SINE Alu 1 289 -23 1009 198 63 24 chr5 171645314 171645521 -31440011 + MER20 DNA MER1_type 1 215 -4 1996 161 52 73 chr5 171645738 171646179 -31439353 - MSTB1 LTR MaLR 0 432 1 507 313 31 6 chr5 171647674 171647837 -31437695 + MIR3 SINE MIR 10 176 -32 256 250 0 0 chr5 171648205 171648265 -31437267 - MIR SINE MIR 0 262 203 198 253 11 84 chr5 171648280 171648375 -31437157 - MIR SINE MIR 0 262 175 218 283 0 0 chr5 171648383 171648429 -31437103 - MIR SINE MIR -205 57 12 437 301 77 26 chr5 171648458 171648614 -31436918 - MIR SINE MIR -88 174 11 200 271 54 36 chr5 171648639 171648734 -31436798 - MIR SINE MIR -83 179 82 537 278 94 21 chr5 171650624 171650815 -31434717 - MIR SINE MIR -14 248 44 197 191 95 0 chr5 171650824 171650866 -31434666 - MIR SINE MIR -109 99 54 * 416 366 21 16 chr5 171650861 171651047 -31434485 - MIR3 SINE MIR -6 202 16 991 190 6 6 chr5 171651537 171651711 -31433821 + FAM SINE Alu 1 174 -1 274 342 84 19 chr5 171652486 171652641 -31432891 + MIR3 SINE MIR 28 192 -16 684 228 14 116 chr5 171654145 171654439 -31431093 - L1ME1 LINE L1 -5 6230 5967 3194 146 69 50 chr5 171654450 171655203 -31430329 - L1MA4 LINE L1 0 6300 5534 745 214 104 9 chr5 171655219 171655439 -31430093 - L1ME1 LINE L1 -280 5955 5715 * 3842 230 67 39 chr5 171655431 171656959 -31428573 - L1ME1 LINE L1 -2329 3886 2315 3071 169 46 25 chr5 171657003 171657718 -31427814 - L1MB7 LINE L1 -9 6175 5446 249 158 158 49 chr5 171657735 171657817 -31427715 - MER113 DNA MER1_type? -211 310 220 291 172 0 0 chr5 171657827 171657891 -31427641 + MER20B DNA MER1_type 603 666 -117 854 246 4 43 chr5 171657898 171658154 -31427378 - L1MB8 LINE L1 -12 6166 5921 296 196 101 43 chr5 171658168 171658306 -31427226 - MER113 DNA MER1_type? -345 176 31 1606 231 80 80 chr5 171658481 171658494 -31427038 - L1ME1 LINE L1 -4027 2369 2357 659 159 79 0 chr5 171658494 171658620 -31426912 - L1PA15 LINE L1 -5 6160 6025 1606 231 80 80 chr5 171658620 171658655 -31426877 - L1ME1 LINE L1 -4039 2357 2323 2303 81 14 7 chr5 171658655 171658675 -31426857 - AluSc SINE Alu -10 299 281 288 0 0 0 chr5 171658675 171658707 -31426825 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 81 14 7 chr5 171658707 171658983 -31426549 - AluSc SINE Alu -28 281 1 1606 231 80 80 chr5 171658983 171659667 -31425865 - L1ME1 LINE L1 -4073 2323 1633 1913 161 0 3 chr5 171659667 171659958 -31425574 - AluSx SINE Alu -22 290 1 1606 231 80 80 chr5 171659958 171660110 -31425422 - L1ME1 LINE L1 -4762 1634 1483 299 148 0 16 chr5 171660130 171660191 -31425341 + (TA)n Simple_repeat Simple_repeat 1 60 0 311 304 0 11 chr5 171660210 171660302 -31425230 - L1MC4 LINE L1 -1338 6704 6614 3118 247 69 31 chr5 171660329 171660440 -31425092 - L1ME1 LINE L1 -4813 1402 1297 2324 196 31 0 chr5 171660440 171660893 -31424639 + MLT1C LTR MaLR 1 467 0 3118 247 69 31 chr5 171660893 171662131 -31423401 - L1ME1 LINE L1 -4918 1297 37 335 315 45 18 chr5 171662540 171662651 -31422881 + MIR SINE MIR 30 143 -65 461 243 128 105 chr5 171663115 171663286 -31422246 + Charlie8 DNA MER1_type 45 211 -2206 2496 73 0 16 chr5 171663286 171663601 -31421931 + AluY SINE Alu 1 310 -1 461 243 128 105 chr5 171663601 171663837 -31421695 + Charlie8 DNA MER1_type 211 461 -1956 182 244 0 141 chr5 171663940 171664018 -31421514 - MIR3 SINE MIR -36 172 106 27 0 0 0 chr5 171664041 171664068 -31421464 + AT_rich Low_complexity Low_complexity 1 27 0 670 299 106 34 chr5 171664392 171664794 -31420738 + HAL1b LINE L1 505 877 -471 2298 74 0 7 chr5 171664794 171665091 -31420441 - AluY SINE Alu -16 295 1 670 299 106 34 chr5 171665091 171665451 -31420081 + HAL1b LINE L1 877 1322 -26 21 36 0 0 chr5 171665461 171665489 -31420043 + AT_rich Low_complexity Low_complexity 1 28 0 28957 113 9 62 chr5 171665776 171670706 -31414826 - L1PA7 LINE L1 -3 6151 1657 2165 117 3 0 chr5 171670706 171670996 -31414536 - AluSg SINE Alu -19 291 1 28957 113 9 62 chr5 171670996 171672559 -31412973 - L1PA7 LINE L1 -4497 1657 12 246 281 42 0 chr5 171672577 171672673 -31412859 - L1ME LINE L1 -463 5658 5559 3660 151 93 4 chr5 171672915 171673646 -31411886 - L1MA5A LINE L1 -4 6293 5498 2077 127 10 0 chr5 171673648 171673939 -31411593 - AluSx SINE Alu -18 294 1 1347 170 25 7 chr5 171673940 171674223 -31411309 - L1M2 LINE L1 -4379 2470 2183 495 275 91 67 chr5 171674367 171674996 -31410536 - HAL1b LINE L1 -701 647 4 221 277 31 0 chr5 171676288 171676353 -31409179 + L2 LINE L2 3000 3066 -206 222 295 86 38 chr5 171676403 171676508 -31409024 - L2 LINE L2 -15 3298 3189 270 270 11 34 chr5 171676585 171676674 -31408858 + L2 LINE L2 3227 3313 0 2244 105 3 6 chr5 171677942 171678255 -31407277 - AluSx SINE Alu 0 312 1 29795 105 14 59 chr5 171678413 171684859 -31400673 - L1PA7 LINE L1 -2 6152 12 570 307 118 36 chr5 171685103 171685543 -31399989 - MLT1H1 LTR MaLR -42 513 38 181 304 29 14 chr5 171685604 171685673 -31399859 - MIR SINE MIR -142 120 51 542 288 36 24 chr5 171685862 171686192 -31399340 + L1ME3A LINE L1 4370 4703 -1443 321 270 37 79 chr5 171686190 171686405 -31399127 + L1ME3A LINE L1 5679 5884 -286 * 294 29 0 0 chr5 171687251 171687286 -31398246 + (CA)n Simple_repeat Simple_repeat 2 36 0 1062 69 8 0 chr5 171687431 171687561 -31397971 + AluSp SINE Alu 1 131 -182 1532 144 179 13 chr5 171687817 171688130 -31397402 - MLT1A1 LTR MaLR 0 365 1 1712 195 10 10 chr5 171688182 171688531 -31397001 + MLT2C1 LTR ERVL 5 468 -50 240 169 34 34 chr5 171688540 171688599 -31396933 + (CATA)n Simple_repeat Simple_repeat 2 60 0 238 105 0 0 chr5 171688604 171688642 -31396890 + MLT2C1 LTR ERVL 358 395 -2 389 345 44 0 chr5 171688726 171688839 -31396693 + L2 LINE L2 3155 3272 0 207 225 56 56 chr5 171688858 171688929 -31396603 + MIR3 SINE MIR 111 181 -27 402 278 9 19 chr5 171688930 171689038 -31396494 + MIR SINE MIR 3 109 -153 361 305 99 47 chr5 171689657 171689870 -31395662 + L2 LINE L2 3090 3313 0 266 289 63 81 chr5 171690282 171690406 -31395126 + MIR SINE MIR 23 145 -63 * 511 327 103 38 chr5 171690382 171690913 -31394619 - L2 LINE L2 -5 3308 2748 2297 253 183 28 chr5 171690933 171691983 -31393549 + L2 LINE L2 2087 3311 -2 421 345 60 5 chr5 171691983 171692183 -31393349 - L2 LINE L2 -570 2744 2534 1288 149 65 12 chr5 171692183 171692431 -31393101 - MER2 DNA MER2_type 0 345 85 13977 206 11 9 chr5 171692433 171692791 -31392741 - L1PB1 LINE L1 -5 6862 6506 330 87 0 0 chr5 171692791 171692837 -31392695 + (TG)n Simple_repeat Simple_repeat 2 47 0 13977 206 11 9 chr5 171692837 171696882 -31388650 - L1PB1 LINE L1 -361 6506 2459 5232 139 44 65 chr5 171696890 171697978 -31387554 - L1PB1 LINE L1 -5792 1071 7 1605 170 91 0 chr5 171697978 171698254 -31387278 - AluJb SINE Alu -11 301 1 478 179 0 42 chr5 171698259 171698354 -31387178 - MER2 DNA MER2_type -253 92 2 639 270 65 84 chr5 171698356 171698711 -31386821 - L2 LINE L2 -780 2534 2187 284 362 32 0 chr5 171698829 171698923 -31386609 - L2 LINE L2 -19 3253 3157 545 300 82 5 chr5 171699239 171699459 -31386073 - MIR SINE MIR -6 256 20 300 333 83 8 chr5 171699472 171699604 -31385928 - L3 LINE CR1 -266 1311 1170 221 305 0 0 chr5 171699613 171699672 -31385860 + MIR SINE MIR 203 261 -1 217 334 0 25 chr5 171699669 171699749 -31385783 - MIR SINE MIR -65 143 75 * 920 150 0 8 chr5 171700943 171701076 -31384456 + FLAM_A SINE Alu 1 132 -1 387 262 113 0 chr5 171701113 171701254 -31384278 + MIR SINE MIR 106 262 0 282 234 280 9 chr5 171701256 171701363 -31384169 - MIR3 SINE MIR -62 146 11 360 271 42 10 chr5 171701910 171702006 -31383526 - MIR3 SINE MIR -100 108 10 507 239 168 13 chr5 171702266 171702421 -31383111 + MER5A DNA MER1_type 9 187 -2 217 259 36 80 chr5 171702734 171702846 -31382686 + MIR SINE MIR 30 136 -72 212 353 39 49 chr5 171702960 171703062 -31382470 - MIR SINE MIR -75 133 33 386 273 28 28 chr5 171703172 171703315 -31382217 - MIR SINE MIR -8 254 112 652 294 72 21 chr5 171703928 171704163 -31381369 + MIR SINE MIR 9 255 -7 1852 224 73 48 chr5 171704730 171704896 -31380636 - MER97a DNA MER1_type? 0 894 734 887 194 0 19 chr5 171704896 171705051 -31380481 - FRAM SINE Alu -13 153 2 1852 224 73 48 chr5 171705051 171705402 -31380130 - MER97a DNA MER1_type? -160 734 364 1032 187 8 51 chr5 171705418 171705588 -31379944 - MER97c DNA MER1_type? -839 251 91 2135 109 3 7 chr5 171705588 171705928 -31379604 + AluSx SINE Alu 1 339 0 1032 187 8 51 chr5 171705928 171705991 -31379541 - MER97c DNA MER1_type? -999 91 27 552 279 34 22 chr5 171706013 171706192 -31379340 + MIR3 SINE MIR 13 193 -15 575 270 240 10 chr5 171706470 171706674 -31378858 - MIR SINE MIR -5 257 7 289 349 33 26 chr5 171706838 171706990 -31378542 - MIR3 SINE MIR -2 206 54 301 271 115 21 chr5 171707336 171707432 -31378100 - L2 LINE L2 -49 3264 3160 877 299 111 35 chr5 171708143 171708858 -31376674 - L2 LINE L2 0 3313 2531 847 313 60 24 chr5 171709246 171709661 -31375871 - MLT1K LTR MaLR 0 588 159 419 234 0 11 chr5 171710146 171710240 -31375292 - MIR3 SINE MIR -10 198 106 348 98 24 98 chr5 171710609 171710691 -31374841 + L1PA10 LINE L1 6093 6168 0 187 250 0 45 chr5 171710766 171710810 -31374722 + L3 LINE CR1 1506 1547 -30 * 488 311 50 29 chr5 171710798 171711036 -31374496 + MIR SINE MIR 15 257 -5 292 253 0 36 chr5 171711372 171711455 -31374077 + MIR SINE MIR 180 259 -3 219 265 214 0 chr5 171711895 171711993 -31373539 - MIR SINE MIR -73 189 71 359 294 71 16 chr5 171712339 171712465 -31373067 + MIR SINE MIR 17 149 -113 973 327 98 55 chr5 171712691 171713697 -31371835 + L2 LINE L2 2218 3270 -2 586 172 0 0 chr5 171713722 171713809 -31371723 - AluJ/FLAM SINE Alu -224 88 2 259 200 0 0 chr5 171713895 171713940 -31371592 - MIR SINE MIR -123 85 41 534 258 23 135 chr5 171714755 171715015 -31370517 - L2 LINE L2 -14 3258 3028 464 356 113 0 chr5 171715171 171715393 -31370139 + MIR SINE MIR 8 254 -8 218 310 121 0 chr5 171715482 171715540 -31369992 - L2 LINE L2 -41 3272 3208 337 235 165 0 chr5 171716473 171716588 -31368944 - L2 LINE L2 0 3313 3180 291 272 130 0 chr5 171716979 171717071 -31368461 + L2 LINE L2 3169 3272 0 295 273 71 0 chr5 171717154 171717253 -31368279 - MIR3 SINE MIR -33 175 70 328 292 40 121 chr5 171717866 171718287 -31367245 - L2 LINE L2 -7 3306 2920 422 230 267 0 chr5 171718397 171718584 -31366948 + MER5C DNA MER1_type 1 237 -87 185 299 219 31 chr5 171718624 171718848 -31366684 - L2 LINE L2 -512 2802 2537 511 261 131 7 chr5 171719891 171720044 -31365488 - MER117 DNA MER1_type -1 196 25 1214 266 39 12 chr5 171720059 171720390 -31365142 - MLT1C LTR MaLR -3 464 125 409 357 35 0 chr5 171720795 171720938 -31364594 - MIR3 SINE MIR -43 165 18 384 309 170 5 chr5 171721528 171721716 -31363816 - MIR SINE MIR -24 238 20 43850 28 22 2 chr5 171721966 171727968 -31357564 + L1HS LINE L1 32 6155 0 473 181 38 0 chr5 171728023 171728128 -31357404 - L1MB7 LINE L1 -3 6181 6073 1117 254 68 0 chr5 171729404 171729640 -31355892 + MIR SINE MIR 7 258 -4 238 325 77 43 chr5 171729677 171729794 -31355738 + MIR SINE MIR 25 145 -63 800 204 67 44 chr5 171730108 171730333 -31355199 - LTR67 LTR ERVL -8 549 320 254 268 31 41 chr5 171730559 171730656 -31354876 - MLT1K LTR MaLR -333 255 160 2492 72 0 3 chr5 171730987 171731292 -31354240 - AluY SINE Alu -7 304 1 34 0 0 0 chr5 171731302 171731336 -31354196 + AT_rich Low_complexity Low_complexity 1 34 0 315 297 24 24 chr5 171731593 171731758 -31353774 - L1ME3A LINE L1 -213 5957 5793 399 289 23 31 chr5 171732224 171732352 -31353180 + MIR SINE MIR 19 145 -63 207 0 0 0 chr5 171732898 171732921 -31352611 + (T)n Simple_repeat Simple_repeat 1 23 0 289 320 10 0 chr5 171732963 171733063 -31352469 + MIR SINE MIR 149 249 -13 721 279 37 29 chr5 171733111 171733355 -31352177 + MIR SINE MIR 6 251 -11 22 56 0 0 chr5 171733370 171733406 -31352126 + AT_rich Low_complexity Low_complexity 1 36 0 284 272 95 34 chr5 171734216 171734363 -31351169 - MIR SINE MIR -101 161 6 548 101 0 13 chr5 171734678 171734757 -31350775 + MADE1 DNA Mariner 1 78 -2 184 128 26 26 chr5 171735556 171735595 -31349937 - L2 LINE L2 -1 3312 3274 190 107 0 0 chr5 171736225 171736253 -31349279 + MIR SINE MIR 118 145 -117 600 274 43 6 chr5 171736791 171736955 -31348577 + MIR SINE MIR 14 183 -79 236 288 0 15 chr5 171737241 171737307 -31348225 - L3 LINE CR1 -123 1454 1390 194 270 63 0 chr5 171737604 171737667 -31347865 + L3b LINE CR1 1319 1385 -198 261 374 0 0 chr5 171738537 171738620 -31346912 - L2 LINE L2 0 3272 3190 581 247 133 6 chr5 171738727 171738893 -31346639 - MER5A DNA MER1_type -1 188 2 218 284 68 0 chr5 171738893 171738963 -31346569 + L2 LINE L2 2870 2944 -370 443 282 13 34 chr5 171739540 171739689 -31345843 + L2 LINE L2 3151 3296 -17 849 55 0 0 chr5 171740519 171740628 -31344904 - AluY SINE Alu -8 303 195 429 320 126 65 chr5 171740695 171740886 -31344646 - L2 LINE L2 0 3313 3135 2068 115 49 0 chr5 171740886 171741173 -31344359 + AluSx SINE Alu 1 301 -11 429 320 126 65 chr5 171741173 171741459 -31344073 - L2 LINE L2 -178 3135 2807 232 333 119 0 chr5 171741540 171741624 -31343908 - MER5A DNA MER1_type -3 186 93 316 269 41 69 chr5 171741636 171741781 -31343751 - MLT1K LTR MaLR -9 579 439 1081 0 0 0 chr5 171741781 171741898 -31343634 + L1HS LINE L1 6033 6149 -6 398 310 34 59 chr5 171741898 171742137 -31343395 - MLT1K LTR MaLR -140 448 216 1006 278 95 48 chr5 171742679 171743887 -31341645 - L1M4 LINE L1 -1511 4635 3371 480 297 63 50 chr5 171744026 171744645 -31340887 - L1M4 LINE L1 -2980 3166 2540 277 284 18 46 chr5 171744956 171745065 -31340467 + MIR3 SINE MIR 97 202 -6 219 204 41 0 chr5 171745051 171745100 -31340432 - L2 LINE L2 0 3313 3263 * 518 290 55 21 chr5 171745258 171745403 -31340129 + MIR SINE MIR 12 161 -101 222 186 23 0 chr5 171745398 171745441 -31340091 + L2 LINE L2 3254 3297 -16 * 304 244 18 2 chr5 171746061 171746139 -31339393 + MIR3 SINE MIR 90 154 -54 546 365 37 12 chr5 171746157 171746398 -31339134 - MIR SINE MIR -7 255 9 400 314 55 19 chr5 171746640 171746911 -31338621 - L1ME4a LINE L1 -196 5925 5645 219 292 15 0 chr5 171747111 171747176 -31338356 - MIR SINE MIR -42 220 155 400 265 118 0 chr5 171747197 171747367 -31338165 - L1ME4a LINE L1 -456 5665 5476 2929 66 13 19 chr5 171748045 171748422 -31337110 + THE1C LTR MaLR 1 375 0 410 283 25 12 chr5 171748611 171748818 -31336714 - L1ME4a LINE L1 -234 5887 5726 320 203 114 0 chr5 171749080 171749159 -31336373 - MIR SINE MIR -112 150 63 388 203 301 0 chr5 171749958 171750091 -31335441 - MIR SINE MIR -4 258 86 413 180 213 0 chr5 171750140 171750262 -31335270 - MER104 DNA Tc2 -25 155 8 212 206 0 0 chr5 171750264 171750298 -31335234 - MIR SINE MIR -185 77 44 309 253 60 12 chr5 171750429 171750512 -31335020 + MER103 DNA DNA 2 88 -78 2576 71 0 0 chr5 171750515 171750826 -31334706 - AluY SINE Alu 0 311 1 189 0 0 0 chr5 171750879 171750900 -31334632 + (T)n Simple_repeat Simple_repeat 1 21 0 584 269 139 67 chr5 171751386 171751732 -31333800 - MLT1L LTR MaLR -14 601 231 1031 178 16 26 chr5 171751808 171751999 -31333533 + MER5A DNA MER1_type 1 189 0 255 212 41 0 chr5 171752233 171752288 -31333244 + MIR SINE MIR 73 130 -78 222 91 0 0 chr5 171753484 171753517 -31332015 + (T)n Simple_repeat Simple_repeat 1 33 0 757 300 65 45 chr5 171753830 171754574 -31330958 - L2 LINE L2 0 3313 2544 15557 128 29 18 chr5 171754689 171755021 -31330511 - Tigger1 DNA MER2_type 0 2418 2091 2147 103 0 10 chr5 171755021 171755321 -31330211 - AluY SINE Alu -14 297 1 15557 128 29 18 chr5 171755321 171755490 -31330042 - Tigger1 DNA MER2_type -327 2091 1925 501 17 0 0 chr5 171755490 171755548 -31329984 + (TA)n Simple_repeat Simple_repeat 1 58 0 15557 128 29 18 chr5 171755548 171757434 -31328098 - Tigger1 DNA MER2_type -493 1925 2 348 285 88 11 chr5 171757583 171757776 -31327756 - MIR SINE MIR 0 262 48 2040 123 10 0 chr5 171757819 171758112 -31327420 - AluSx SINE Alu -16 296 1 1042 97 8 0 chr5 171758112 171758246 -31327286 - AluSq/x SINE Alu -177 135 1 265 352 60 34 chr5 171758766 171758999 -31326533 + MIR SINE MIR 5 243 -19 227 297 125 0 chr5 171759270 171759334 -31326198 - L2 LINE L2 0 3272 3201 250 320 39 13 chr5 171759344 171759422 -31326110 + L3 LINE CR1 1430 1509 -68 275 234 32 106 chr5 171759482 171759576 -31325956 - MIR3 SINE MIR -6 202 116 228 269 149 37 chr5 171759760 171759894 -31325638 + MIR SINE MIR 1 149 -113 808 266 81 101 chr5 171759896 171760412 -31325120 - MLT1J LTR MaLR -5 506 1 409 219 10 10 chr5 171760419 171760515 -31325017 + MIR SINE MIR 148 243 -19 291 321 98 26 chr5 171760691 171760884 -31324648 - MIR SINE MIR -8 254 48 242 317 122 24 chr5 171760908 171761031 -31324501 + MIR3 SINE MIR 49 183 -25 1180 112 0 18 chr5 171761251 171761420 -31324112 + AluSp SINE Alu 143 308 -5 1698 189 72 15 chr5 171761575 171761976 -31323556 - LTR37A LTR ERV1 -2 424 1 186 265 44 73 chr5 171762236 171762304 -31323228 + MIR SINE MIR 65 130 -78 2239 118 16 12 chr5 171762428 171762751 -31322781 - L1PA10 LINE L1 0 6168 5845 4041 127 26 18 chr5 171762751 171763358 -31322174 + LTR9 LTR ERV1 1 612 0 241 211 178 66 chr5 171763360 171763491 -31322041 + MIR SINE MIR 17 161 -101 1115 264 184 23 chr5 171763491 171763926 -31321606 + MLT1D LTR MaLR 1 505 0 241 211 178 66 chr5 171763926 171763985 -31321547 + MIR SINE MIR 161 212 -50 486 297 154 41 chr5 171764870 171765471 -31320061 - L2 LINE L2 -25 3288 2619 240 250 13 40 chr5 171765506 171765582 -31319950 - MIR SINE MIR -90 118 45 416 274 140 34 chr5 171765817 171766045 -31319487 + MIR SINE MIR 3 252 -10 184 191 0 64 chr5 171766015 171766062 -31319470 + L2 LINE L2 3268 3311 -2 * 489 245 126 72 chr5 171766483 171766749 -31318783 - L1ME4a LINE L1 -11 6110 5860 189 0 0 0 chr5 171766749 171766770 -31318762 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2908 39 6 0 chr5 171766775 171767110 -31318422 - L1PA4 LINE L1 -4 6151 5815 489 245 126 72 chr5 171767110 171767322 -31318210 - L1ME4a LINE L1 -264 5857 5600 539 243 18 53 chr5 171767499 171767668 -31317864 - MIR SINE MIR -50 212 50 588 350 27 0 chr5 171768006 171768263 -31317269 + Charlie8 DNA MER1_type 1 264 -2153 410 320 132 18 chr5 171769360 171769579 -31315953 + MIR SINE MIR 5 248 -14 309 316 58 7 chr5 171770588 171770743 -31314789 + MIR3 SINE MIR 41 203 -5 423 345 66 18 chr5 171772214 171772265 -31313267 + L3 LINE CR1 1329 1376 -201 2345 88 0 7 chr5 171772265 171772562 -31312970 - AluY SINE Alu -16 295 1 423 345 66 18 chr5 171772562 171772736 -31312796 + L3 LINE CR1 1376 1565 -12 337 299 0 28 chr5 171773041 171773148 -31312384 + L2 LINE L2 3178 3281 -32 182 381 42 12 chr5 171773770 171773938 -31311594 + L2 LINE L2 1242 1414 -1900 234 128 0 0 chr5 171774026 171774065 -31311467 + (GA)n Simple_repeat Simple_repeat 2 40 0 330 342 135 58 chr5 171774235 171774547 -31310985 + L2 LINE L2 1728 2014 -1300 991 170 80 11 chr5 171774547 171774735 -31310797 - MER105 DNA DNA -1 203 3 330 342 135 58 chr5 171774735 171775457 -31310075 + L2 LINE L2 2014 2842 -472 252 372 80 7 chr5 171775642 171775779 -31309753 + L2 LINE L2 3161 3307 -6 263 352 19 37 chr5 171775840 171775948 -31309584 + MIR SINE MIR 17 122 -86 843 178 0 122 chr5 171775948 171776178 -31309354 - MLT1A1 LTR MaLR 0 365 164 517 188 0 0 chr5 171776402 171776482 -31309050 - MLT1A1 LTR MaLR -316 80 1 7454 210 60 46 chr5 171776482 171776800 -31308732 - MLT1A1-int LTR MaLR 0 1735 1423 2431 94 0 3 chr5 171776800 171777108 -31308424 - AluSc SINE Alu -2 307 1 7454 210 60 46 chr5 171777108 171778500 -31307032 - MLT1A1-int LTR MaLR -312 1423 1 957 242 78 61 chr5 171778500 171778859 -31306673 - MLT1A1 LTR MaLR 0 365 1 213 178 0 22 chr5 171778859 171778904 -31306628 + MIR SINE MIR 117 160 -102 180 303 48 87 chr5 171779724 171779932 -31305600 + MIR SINE MIR 50 249 -13 2165 234 41 22 chr5 171780424 171780933 -31304599 + LTR40a LTR ERVL 1 519 0 400 351 53 31 chr5 171781064 171781504 -31304028 + L2 LINE L2 2613 3060 -212 224 378 9 18 chr5 171781688 171781799 -31303733 - MIR SINE MIR -66 142 33 306 116 0 0 chr5 171783507 171783550 -31301982 - 5S rRNA rRNA -78 43 1 342 314 79 21 chr5 171783613 171783753 -31301779 + MIR3 SINE MIR 50 197 -11 1405 246 50 13 chr5 171784156 171784612 -31300920 - MER113 DNA MER1_type? -48 473 1 339 250 0 12 chr5 171784620 171784700 -31300832 + MIR SINE MIR 17 95 -167 250 304 234 10 chr5 171784955 171785156 -31300376 + MIR SINE MIR 5 250 -12 412 200 32 21 chr5 171785602 171785697 -31299835 - MLT1K LTR MaLR -61 527 432 387 311 8 17 chr5 171786032 171786151 -31299381 - MIR SINE MIR -59 149 32 1856 164 11 3 chr5 171786166 171786452 -31299080 - AluSx SINE Alu -24 288 1 312 287 33 33 chr5 171786960 171787082 -31298450 - MIR3 SINE MIR -19 189 68 236 98 0 98 chr5 171787306 171787347 -31298185 - MLT1B LTR MaLR -353 37 1 319 303 98 8 chr5 171788482 171788604 -31296928 - MIR3 SINE MIR -61 147 15 676 272 140 25 chr5 171788627 171788862 -31296670 + MIR SINE MIR 1 262 0 538 264 81 30 chr5 171790050 171790247 -31295285 + MER102a DNA MER1_type 108 314 -16 279 325 0 0 chr5 171790277 171790357 -31295175 - MIR3 SINE MIR -48 160 81 183 282 127 0 chr5 171790699 171790770 -31294762 + MIR SINE MIR 112 191 -71 247 273 27 45 chr5 171790984 171791094 -31294438 - HAL1 LINE L1 -77 2430 2323 236 339 26 0 chr5 171791102 171791217 -31294315 - L1MC4a LINE L1 -1879 5929 5812 576 202 10 129 chr5 171791275 171791468 -31294064 - MER58C DNA MER1_type -18 197 28 339 255 52 25 chr5 171791494 171791652 -31293880 - L1MC4a LINE L1 -396 5725 5570 265 316 94 26 chr5 171791653 171791770 -31293762 - MIR SINE MIR -68 140 16 2762 111 16 0 chr5 171791787 171792156 -31293376 + THE1C LTR MaLR 1 375 0 475 269 85 30 chr5 171792423 171792624 -31292908 - MLT1L LTR MaLR -10 605 394 381 284 63 8 chr5 171792688 171792815 -31292717 - MLT1L LTR MaLR -333 282 149 203 323 0 16 chr5 171793149 171793211 -31292321 + MIR SINE MIR 23 83 -179 2165 121 3 0 chr5 171793689 171793987 -31291545 + AluSq SINE Alu 1 299 -14 26 0 0 0 chr5 171794029 171794055 -31291477 + AT_rich Low_complexity Low_complexity 1 26 0 426 289 74 7 chr5 171794391 171794526 -31291006 + MIR SINE MIR 57 200 -62 901 213 47 25 chr5 171794537 171794772 -31290760 + MIR SINE MIR 9 248 -14 305 262 30 47 chr5 171795157 171795300 -31290232 + MIR SINE MIR 17 157 -63 752 228 110 72 chr5 171795327 171795617 -31289915 + MER102b DNA MER1_type 41 341 0 321 370 36 7 chr5 171795945 171796083 -31289449 - MIR SINE MIR -105 157 16 545 354 97 17 chr5 171796504 171796908 -31288624 - L3 LINE CR1 -7 1570 1135 378 300 49 52 chr5 171796923 171797388 -31288144 + LTR33A LTR ERVL 14 517 -4 266 286 38 38 chr5 171797462 171797567 -31287965 - L3 LINE CR1 -576 1001 897 727 281 41 18 chr5 171797587 171797808 -31287724 + MIR SINE MIR 31 256 -6 507 243 171 13 chr5 171797975 171798127 -31287405 + MER5A DNA MER1_type 14 189 0 250 272 37 25 chr5 171798419 171798500 -31287032 + MIR SINE MIR 151 232 -30 428 246 100 15 chr5 171798996 171799126 -31286406 + MIR SINE MIR 24 164 -98 20484 104 10 21 chr5 171799390 171805861 -31279671 - L1PA8 LINE L1 -1 6486 11 281 277 50 30 chr5 171805990 171806091 -31279441 - MIR SINE MIR -1 261 159 2000 222 50 24 chr5 171806092 171806597 -31278935 - MLT1F LTR MaLR 0 542 25 418 296 12 83 chr5 171806598 171806767 -31278765 - MIR SINE MIR -105 157 1 210 305 39 62 chr5 171807108 171807236 -31278296 + L2 LINE L2 3177 3301 -12 1534 167 16 16 chr5 171808088 171808346 -31277186 - AluJo SINE Alu -19 293 36 215 207 69 0 chr5 171808587 171808645 -31276887 + MIR SINE MIR 32 93 -115 184 250 19 19 chr5 171808697 171808749 -31276783 - L2 LINE L2 -12 3260 3209 265 320 196 61 chr5 171808749 171809112 -31276420 + L2 LINE L2 2809 3220 -52 630 316 31 4 chr5 171809118 171809346 -31276186 - MIR SINE MIR 0 262 29 1987 157 15 32 chr5 171809460 171809803 -31275729 + MER1B DNA MER1_type 1 337 0 573 234 21 0 chr5 171809813 171809958 -31275574 + L1MA10 LINE L1 6180 6327 -7 308 302 57 39 chr5 171811592 171811738 -31273794 - MIR3 SINE MIR -51 157 3 1782 236 39 63 chr5 171812131 171812746 -31272786 - L1ME3 LINE L1 -8 6154 5555 601 236 0 20 chr5 171812782 171812961 -31272571 + MER4E LTR ERV1 1 284 -588 * 1576 200 20 14 chr5 171812959 171813314 -31272218 + MER4D LTR ERV1 547 903 0 180 261 33 76 chr5 171813470 171813562 -31271970 - MIR3 SINE MIR -28 180 93 712 224 151 58 chr5 171813759 171814224 -31271308 - MER113 DNA MER1_type? -1 520 13 787 263 49 22 chr5 171815015 171815239 -31270293 - MIR SINE MIR -31 231 2 829 271 54 45 chr5 171816420 171816860 -31268672 - L1MC4a LINE L1 -362 5800 5461 453 214 0 39 chr5 171817449 171817552 -31267980 + MIR3 SINE MIR 69 167 -41 3292 268 41 42 chr5 171817713 171819278 -31266254 - HAL1 LINE L1 -167 2340 778 326 234 0 56 chr5 171819308 171819415 -31266117 + MER112 DNA MER1_type 148 248 -12 197 239 84 0 chr5 171819634 171819705 -31265827 + L2 LINE L2 2632 2708 -606 225 0 0 0 chr5 171819762 171819787 -31265745 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 5485 56 3 0 chr5 171820027 171820707 -31264825 - L1PA7 LINE L1 0 6154 5473 506 342 109 12 chr5 171820722 171821044 -31264488 - HAL1 LINE L1 -1786 721 369 552 268 49 45 chr5 171821150 171821396 -31264136 - HAL1 LINE L1 -2137 370 124 249 314 32 90 chr5 171821492 171821680 -31263852 + L2 LINE L2 3000 3176 -96 579 322 38 0 chr5 171821718 171821929 -31263603 - MIR SINE MIR -15 247 29 216 220 40 0 chr5 171822267 171822317 -31263215 + L2 LINE L2 3205 3256 -16 217 268 268 0 chr5 171822994 171823076 -31262456 + L2 LINE L2 3205 3308 -5 1007 125 24 0 chr5 171823846 171824014 -31261518 + L1MA4A LINE L1 6131 6302 -1 1795 145 42 55 chr5 171824152 171824531 -31261001 - THE1C LTR MaLR 0 375 2 9180 122 31 41 chr5 171824537 171826125 -31259407 - THE1C-int LTR MaLR -7 1573 1 1907 162 47 6 chr5 171826126 171826485 -31259047 - THE1C LTR MaLR -1 374 1 328 329 63 28 chr5 171826621 171826764 -31258768 - L2 LINE L2 -287 3026 2879 394 260 107 40 chr5 171826866 171827016 -31258516 - MIR SINE MIR -31 231 72 224 274 124 18 chr5 171827306 171827419 -31258113 + MIR SINE MIR 19 143 -65 294 274 204 25 chr5 171827484 171827641 -31257891 - MIR SINE MIR -6 256 72 224 314 89 41 chr5 171827648 171827817 -31257715 + L2 LINE L2 2763 2939 -375 259 194 48 0 chr5 171827862 171827924 -31257608 + MLT1H1 LTR MaLR 484 548 -7 279 280 24 71 chr5 171827954 171828122 -31257410 + L2 LINE L2 3088 3247 -66 504 269 78 62 chr5 171828238 171828494 -31257038 - MLT1L LTR MaLR -150 465 206 1449 258 40 42 chr5 171828494 171828975 -31256557 + MER68 LTR ERV1 3 482 -80 590 283 16 27 chr5 171830021 171830205 -31255327 - MIR3 SINE MIR -8 200 19 517 281 34 48 chr5 171830452 171830663 -31254869 - MLT1L LTR MaLR -10 605 293 411 278 43 12 chr5 171830727 171830889 -31254643 - MLT1L LTR MaLR -341 274 108 335 277 9 71 chr5 171830899 171831011 -31254521 - MIR SINE MIR -102 106 2 393 294 6 50 chr5 171831348 171831508 -31254024 - MIR3 SINE MIR -7 201 49 402 307 65 14 chr5 171832106 171832321 -31253211 + L2 LINE L2 3087 3312 -1 233 318 68 0 chr5 171832324 171832412 -31253120 - MIR SINE MIR -84 178 85 566 285 48 43 chr5 171832426 171832849 -31252683 - MLT1L LTR MaLR -17 598 72 265 227 15 15 chr5 171832790 171832856 -31252676 - LTR67 LTR ERVL -384 173 108 * 1982 145 137 2 chr5 171832862 171833256 -31252276 - Tigger2 DNA MER2_type -5 2713 2267 288 215 62 0 chr5 171833240 171833305 -31252227 - Tigger2 DNA MER2_type -2649 69 1 * 304 289 12 12 chr5 171833392 171833475 -31252057 - MIR SINE MIR -168 94 12 295 341 11 0 chr5 171833545 171833636 -31251896 + MIR3 SINE MIR 113 204 -4 496 314 0 45 chr5 171834066 171834222 -31251310 + MIR3 SINE MIR 43 191 -17 508 313 65 13 chr5 171834502 171834732 -31250800 + MIR SINE MIR 20 261 -1 198 354 0 0 chr5 171834946 171835028 -31250504 + MIR SINE MIR 66 147 -115 3902 221 49 12 chr5 171835321 171835648 -31249884 - L1MD2 LINE L1 -210 6149 5835 1867 166 30 0 chr5 171835648 171835986 -31249546 + MER7A DNA MER2_type 1 346 0 3902 221 49 12 chr5 171835986 171837711 -31247821 - L1MD2 LINE L1 -524 5835 4024 312 325 44 6 chr5 171837755 171837915 -31247617 - L1MC/D LINE L1 -2010 5798 5633 1893 296 101 28 chr5 171837917 171838996 -31246536 + L2 LINE L2 2144 3309 -4 315 216 55 40 chr5 171839000 171839131 -31246401 - L1MC/D LINE L1 -484 5637 5513 279 0 0 0 chr5 171839476 171839507 -31246025 + (T)n Simple_repeat Simple_repeat 1 31 0 323 164 25 107 chr5 171839926 171840048 -31245484 + MER103 DNA DNA 45 156 -10 461 287 101 43 chr5 171840870 171841198 -31244334 + L1ME4a LINE L1 5770 6116 -5 335 284 0 0 chr5 171841617 171841691 -31243841 + MIR3 SINE MIR 125 198 -10 363 277 92 23 chr5 171841796 171841926 -31243606 + MIR3 SINE MIR 12 150 -58 983 223 14 19 chr5 171842053 171842268 -31243264 - MER20 DNA MER1_type 0 219 6 2209 126 3 0 chr5 171842727 171843036 -31242496 - AluSg SINE Alu 0 310 1 210 300 0 0 chr5 171843055 171843115 -31242417 + MIR SINE MIR 75 134 -128 263 317 77 10 chr5 171843197 171843301 -31242231 - MIR SINE MIR -45 217 107 306 329 66 12 chr5 171843636 171843803 -31241729 - MIR3 SINE MIR -3 205 30 640 192 11 99 chr5 171843903 171844085 -31241447 + MIR SINE MIR 97 262 0 24 0 0 0 chr5 171844085 171844109 -31241423 + AT_rich Low_complexity Low_complexity 1 24 0 3236 224 23 39 chr5 171844172 171845425 -31240107 - L1ME1 LINE L1 -20 6146 4921 185 208 167 0 chr5 171845588 171845636 -31239896 - L2 LINE L2 -5 3308 3253 449 276 7 62 chr5 171846364 171846509 -31239023 - L2 LINE L2 0 3272 3136 431 147 13 0 chr5 171846653 171846728 -31238804 - L1ME LINE L1 -546 5620 5545 272 370 50 0 chr5 171847580 171847680 -31237852 - MIR SINE MIR -75 133 29 31 58 0 0 chr5 171848096 171848148 -31237384 + AT_rich Low_complexity Low_complexity 1 52 0 437 216 82 0 chr5 171848383 171848517 -31237015 + L1MB7 LINE L1 6040 6184 0 305 324 68 51 chr5 171848616 171848980 -31236552 - L2 LINE L2 -224 3048 2678 1892 133 14 0 chr5 171849145 171849423 -31236109 + AluSx SINE Alu 1 282 -30 301 141 0 26 chr5 171849440 171849518 -31236014 + (TA)n Simple_repeat Simple_repeat 2 77 0 539 377 27 27 chr5 171849622 171849951 -31235581 - L2 LINE L2 -852 2462 2134 488 258 115 22 chr5 171849940 171850073 -31235459 - L2 LINE L2 -70 3243 3087 * 2465 82 0 3 chr5 171850073 171850379 -31235153 + AluSg SINE Alu 1 305 -5 488 258 115 22 chr5 171850379 171850427 -31235105 - L2 LINE L2 -226 3087 3045 707 330 39 50 chr5 171850445 171850991 -31234541 - L2 LINE L2 -1178 2136 1597 216 333 126 28 chr5 171851026 171851281 -31234251 - L2 LINE L2 -1927 1387 1108 1117 294 117 11 chr5 171851593 171852348 -31233184 - L2 LINE L2 -10 3303 2470 38500 33 26 2 chr5 171852393 171858423 -31227109 + L1PA2 LINE L1 1 6155 0 950 317 27 22 chr5 171858465 171858869 -31226663 - L2 LINE L2 -905 2409 2004 188 277 92 0 chr5 171859204 171859269 -31226263 - L2 LINE L2 -293 2979 2909 555 301 155 5 chr5 171859913 171860132 -31225400 - MIR SINE MIR -2 260 9 293 354 63 30 chr5 171860508 171860745 -31224787 + L2 LINE L2 1177 1421 -1893 359 246 21 134 chr5 171860824 171860930 -31224602 - MIR SINE MIR -11 251 173 3768 148 58 20 chr5 171860930 171861671 -31223861 - L1MA8 LINE L1 -1 6290 5522 359 246 21 134 chr5 171861671 171861751 -31223781 - MIR SINE MIR -89 173 86 238 331 138 30 chr5 171861741 171862010 -31223522 + L2 LINE L2 2128 2425 -889 * 204 283 0 0 chr5 171862758 171862804 -31222728 + MIR SINE MIR 104 149 -113 184 314 47 47 chr5 171862962 171863048 -31222484 + L2 LINE L2 2427 2512 -802 228 239 206 0 chr5 171863108 171863200 -31222332 - MIR3 SINE MIR -88 120 10 484 249 75 55 chr5 171863235 171863387 -31222145 + MIR SINE MIR 48 206 -56 1633 195 45 57 chr5 171863387 171863859 -31221673 - MLT1C LTR MaLR -1 466 1 484 249 75 55 chr5 171863859 171863907 -31221625 + MIR SINE MIR 206 252 -10 187 255 92 71 chr5 171864100 171864198 -31221334 + L3b LINE CR1 1439 1538 -45 * 585 320 17 0 chr5 171864189 171864367 -31221165 - MIR3 SINE MIR -7 201 21 721 189 88 34 chr5 171864482 171864564 -31220968 - MER33 DNA MER1_type -2261 363 287 720 136 0 0 chr5 171864564 171864682 -31220850 + L1PB4 LINE L1 6037 6154 -2 721 189 88 34 chr5 171864682 171864837 -31220695 - MER33 DNA MER1_type -2337 287 113 186 43 0 0 chr5 171864847 171864870 -31220662 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 1455 76 0 0 chr5 171864870 171865067 -31220465 - L1PA8 LINE L1 -24 6148 5952 308 258 65 11 chr5 171865067 171865160 -31220372 - MER33 DNA MER1_type -226 98 1 2381 61 3 7 chr5 171865609 171865903 -31219629 + AluY SINE Alu 1 293 -18 887 318 72 46 chr5 171866261 171866759 -31218773 + L2 LINE L2 2766 3271 -1 219 333 67 0 chr5 171866995 171867070 -31218462 + MIR SINE MIR 32 111 -97 272 333 81 46 chr5 171867522 171867696 -31217836 + MIR3 SINE MIR 1 180 -28 256 273 29 0 chr5 171867847 171867928 -31217604 + MIR SINE MIR 94 177 -63 230 407 28 28 chr5 171868052 171868197 -31217335 - L2 LINE L2 -20 3252 3108 885 218 107 23 chr5 171868206 171868422 -31217110 - MIR SINE MIR -17 245 12 215 339 36 76 chr5 171868438 171868662 -31216870 - L2 LINE L2 -166 3106 2892 * 541 271 27 50 chr5 171868605 171868826 -31216706 + L2 LINE L2 2761 2976 -338 451 282 6 39 chr5 171868828 171868984 -31216548 + L2 LINE L2 3161 3311 -2 433 254 56 56 chr5 171869094 171869291 -31216241 + MER20 DNA MER1_type 1 197 -22 369 153 0 0 chr5 171869672 171869744 -31215788 + (TCCA)n Simple_repeat Simple_repeat 3 74 0 277 317 73 0 chr5 171869758 171869840 -31215692 - MIR SINE MIR -102 106 19 322 167 0 48 chr5 171869913 171869997 -31215535 - MADE1 DNA Mariner 0 80 1 383 250 50 69 chr5 171870003 171870163 -31215369 - MIR SINE MIR -51 211 55 678 328 112 28 chr5 171870439 171870902 -31214630 - L3 LINE CR1 -9 1568 1067 450 0 0 0 chr5 171871663 171871713 -31213819 + (CA)n Simple_repeat Simple_repeat 2 51 0 359 250 10 10 chr5 171872024 171872128 -31213404 + Charlie8 DNA MER1_type 74 177 -2240 943 273 84 25 chr5 171872545 171872822 -31212710 - MLT1K LTR MaLR 0 588 278 279 0 0 0 chr5 171872822 171872853 -31212679 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 943 273 84 25 chr5 171872853 171872978 -31212554 - MLT1K LTR MaLR -310 278 162 2071 143 0 7 chr5 171873076 171873383 -31212149 - AluJb SINE Alu -7 305 1 213 314 69 39 chr5 171873485 171873587 -31211945 - MIR3 SINE MIR -17 191 87 454 290 21 32 chr5 171873686 171873872 -31211660 - MIR SINE MIR -46 216 33 342 390 6 12 chr5 171874126 171874295 -31211237 - MIR3 SINE MIR -6 202 35 733 244 73 75 chr5 171874383 171874903 -31210629 - MER113 DNA MER1_type? -2 519 1 540 304 91 14 chr5 171874944 171875164 -31210368 + MIR SINE MIR 20 256 -6 674 149 8 0 chr5 171875641 171875762 -31209770 - MER96B DNA MER1_type? -295 122 1 235 294 206 65 chr5 171875791 171876053 -31209479 + L3 LINE CR1 1272 1570 -7 224 297 0 16 chr5 171876220 171876284 -31209248 - MIR SINE MIR -6 256 194 1943 216 102 50 chr5 171876297 171876314 -31209218 - L1ME2 LINE L1 -12 6152 6137 1933 142 9 26 chr5 171876314 171876659 -31208873 + MER44D DNA MER2_type 1 609 0 1943 216 102 50 chr5 171876659 171877321 -31208211 - L1ME2 LINE L1 -27 6137 5438 752 236 16 45 chr5 171877352 171877594 -31207938 - L1ME1 LINE L1 -18 6148 5914 987 184 60 17 chr5 171877594 171877828 -31207704 - MLT1A1 LTR MaLR -121 244 1 1218 192 42 63 chr5 171877850 171877959 -31207573 - L1ME1 LINE L1 -551 5615 5505 1663 243 35 13 chr5 171877959 171878416 -31207116 + MLT1C LTR MaLR 1 467 0 1218 192 42 63 chr5 171878416 171878705 -31206827 - L1ME1 LINE L1 -661 5505 5243 1939 126 0 21 chr5 171878705 171879015 -31206517 - AluSc SINE Alu 0 304 1 1218 192 42 63 chr5 171879015 171879205 -31206327 - L1ME1 LINE L1 -923 5243 5050 473 75 45 0 chr5 171879316 171879383 -31206149 - Tigger1 DNA MER2_type -398 2020 1951 11376 136 17 7 chr5 171879571 171881464 -31204068 - Tigger1 DNA MER2_type -506 1912 1 564 296 34 67 chr5 171881836 171882342 -31203190 - L1ME LINE L1 -5576 494 6 272 333 32 9 chr5 171882373 171882505 -31203027 - MIR SINE MIR -67 141 47 1225 236 75 17 chr5 171882908 171883255 -31202277 - MLT1A2 LTR MaLR -4 370 4 362 315 42 14 chr5 171883727 171883870 -31201662 + MIR SINE MIR 112 258 -4 285 29 0 0 chr5 171883870 171883904 -31201628 + (ATG)n Simple_repeat Simple_repeat 2 35 0 4631 161 13 32 chr5 171884093 171885113 -31200419 + L1MB4 LINE L1 5186 6179 -1 5905 57 37 6 chr5 171885437 171886215 -31199317 + L1PA7 LINE L1 5353 6154 0 21 0 0 0 chr5 171886319 171886340 -31199192 + AT_rich Low_complexity Low_complexity 1 21 0 195 140 18 35 chr5 171887115 171887172 -31198360 + CT-rich Low_complexity Low_complexity 2 57 0 21 36 0 0 chr5 171887953 171887981 -31197551 + AT_rich Low_complexity Low_complexity 1 28 0 282 200 160 0 chr5 171888009 171888084 -31197448 + L2 LINE L2 3227 3313 0 332 367 9 9 chr5 171889038 171889147 -31196385 + MIR SINE MIR 37 145 -63 21 0 0 0 chr5 171889617 171889638 -31195894 + AT_rich Low_complexity Low_complexity 1 21 0 233 311 47 28 chr5 171889811 171889917 -31195615 - L2 LINE L2 -5 3267 3160 608 308 113 35 chr5 171890187 171890587 -31194945 - L2 LINE L2 -410 2904 2474 217 306 198 8 chr5 171890610 171890731 -31194801 + L2 LINE L2 3170 3313 0 196 267 53 40 chr5 171891875 171891950 -31193582 - MIR SINE MIR -78 130 55 426 346 31 40 chr5 171892635 171892863 -31192669 + MIR SINE MIR 33 258 -4 212 348 97 34 chr5 171893860 171894067 -31191465 - L3 LINE CR1 -9 1568 1349 512 338 50 10 chr5 171894100 171894301 -31191231 - MIR SINE MIR -34 228 20 993 110 0 0 chr5 171894359 171894505 -31191027 + L1PA8 LINE L1 6025 6170 -2 38 0 0 0 chr5 171894688 171894726 -31190806 + AT_rich Low_complexity Low_complexity 1 38 0 410 314 17 35 chr5 171894785 171894957 -31190575 - MIR SINE MIR -16 246 78 733 259 18 61 chr5 171895035 171895313 -31190219 + MER46C DNA MER2_type 73 338 0 24 0 0 0 chr5 171895395 171895419 -31190113 + AT_rich Low_complexity Low_complexity 1 24 0 1787 78 39 8 chr5 171895419 171895677 -31189855 - L1PA10 LINE L1 -11 6157 5892 24 0 0 0 chr5 171895750 171895774 -31189758 + AT_rich Low_complexity Low_complexity 1 24 0 249 333 10 21 chr5 171895883 171895979 -31189553 + MIR SINE MIR 2 96 -166 2651 58 0 0 chr5 171896241 171896552 -31188980 - AluY SINE Alu 0 311 1 2262 114 0 0 chr5 171896815 171897114 -31188418 + AluSq SINE Alu 1 299 -14 397 260 48 10 chr5 171897288 171897392 -31188140 - MER5A DNA MER1_type -21 168 61 1038 240 40 17 chr5 171897415 171897761 -31187771 - L1MA9 LINE L1 -45 6267 5914 1668 173 12 77 chr5 171898152 171898569 -31186963 - L1MB1 LINE L1 -3 6165 5776 2079 175 11 85 chr5 171898607 171899260 -31186272 - L1MB1 LINE L1 -363 5805 5206 263 200 0 14 chr5 171899715 171899785 -31185747 + (TAA)n Simple_repeat Simple_repeat 3 71 0 2309 116 7 0 chr5 171899905 171900215 -31185317 - AluSx SINE Alu 0 312 1 187 393 37 9 chr5 171900399 171900506 -31185026 - MIR3 SINE MIR -84 124 15 328 255 65 59 chr5 171900929 171901082 -31184450 - MIR3 SINE MIR -7 201 48 * 582 249 138 40 chr5 171901076 171901329 -31184203 + L2 LINE L2 3035 3312 -1 299 309 21 21 chr5 171902318 171902415 -31183117 - MIR3 SINE MIR -36 172 76 260 122 0 0 chr5 171902801 171902842 -31182690 - LTR67 LTR ERVL -9 548 508 1846 144 26 93 chr5 171902844 171903261 -31182271 - MLT1B LTR MaLR 0 390 2 325 197 13 13 chr5 171903458 171903534 -31181998 + L3 LINE CR1 798 873 -704 187 257 0 0 chr5 171903703 171903738 -31181794 - L2 LINE L2 -28 3285 3251 * 764 234 13 6 chr5 171903709 171903867 -31181665 - MIR SINE MIR -28 234 76 461 157 128 20 chr5 171903876 171903978 -31181554 - MIR SINE MIR -127 135 23 310 261 44 94 chr5 171903981 171904161 -31181371 + L3 LINE CR1 1212 1382 -195 281 141 14 0 chr5 171910194 171910265 -31175267 + (ATTG)n Simple_repeat Simple_repeat 3 74 0 21 0 0 0 chr5 171915192 171915213 -31170319 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 171923965 171923987 -31161545 + GC_rich Low_complexity Low_complexity 1 22 0 2182 121 3 0 chr5 171926510 171926808 -31158724 + AluSq SINE Alu 1 299 -14 26 0 0 0 chr5 171926850 171926876 -31158656 + AT_rich Low_complexity Low_complexity 1 26 0 388 291 79 8 chr5 171927212 171927339 -31158193 + MIR SINE MIR 57 192 -70 823 213 47 25 chr5 171927358 171927593 -31157939 + MIR SINE MIR 9 248 -14 279 205 36 48 chr5 171928038 171928121 -31157411 + MIR SINE MIR 76 157 -105 743 228 110 72 chr5 171928148 171928438 -31157094 + MER102a DNA MER1_type 30 330 0 281 370 36 7 chr5 171928766 171928904 -31156628 - MIR SINE MIR -105 157 16 436 356 97 17 chr5 171929325 171929729 -31155803 - L3 LINE CR1 -7 1570 1135 383 304 47 50 chr5 171929744 171930209 -31155323 + LTR33A LTR ERVL 14 517 -4 239 286 38 38 chr5 171930283 171930388 -31155144 - L3 LINE CR1 -576 1001 897 663 281 41 18 chr5 171930408 171930629 -31154903 + MIR SINE MIR 31 256 -6 455 243 171 13 chr5 171930796 171930948 -31154584 + MER5A DNA MER1_type 14 189 0 231 276 26 26 chr5 171931245 171931321 -31154211 + MIR SINE MIR 157 232 -30 385 246 100 15 chr5 171931817 171931947 -31153585 + MIR SINE MIR 24 164 -98 37685 80 31 2 chr5 171932211 171938181 -31147351 - L1PA8 LINE L1 -1 6171 32 329 309 170 5 chr5 171938431 171938619 -31146913 + MIR SINE MIR 20 238 -24 365 357 35 0 chr5 171939209 171939352 -31146180 + MIR3 SINE MIR 18 165 -43 1209 266 39 12 chr5 171939757 171940088 -31145444 + MLT1C LTR MaLR 125 464 -3 510 261 131 7 chr5 171940103 171940256 -31145276 + MER117 DNA MER1_type 25 196 -1 374 230 267 0 chr5 171941563 171941750 -31143782 - MER5C DNA MER1_type -87 237 1 333 276 0 60 chr5 171941855 171941971 -31143561 + L2 LINE L2 2914 3022 -250 269 273 71 0 chr5 171942894 171942993 -31142539 + MIR3 SINE MIR 70 175 -33 261 272 130 0 chr5 171943076 171943168 -31142364 - L2 LINE L2 0 3272 3169 300 235 165 0 chr5 171943559 171943674 -31141858 + L2 LINE L2 3180 3313 0 200 310 121 0 chr5 171944607 171944665 -31140867 + L2 LINE L2 3208 3272 -41 398 356 113 0 chr5 171944754 171944976 -31140556 - MIR SINE MIR -8 254 8 472 281 31 0 chr5 171945264 171945392 -31140140 + L2 LINE L2 3127 3258 -14 240 200 0 0 chr5 171946219 171946264 -31139268 + MIR SINE MIR 41 85 -123 551 172 0 0 chr5 171946350 171946437 -31139095 + AluJ/FLAM SINE Alu 2 88 -224 775 326 99 56 chr5 171946462 171947468 -31138064 - L2 LINE L2 -2 3270 2218 319 294 71 16 chr5 171947694 171947820 -31137712 - MIR SINE MIR -113 149 17 194 265 214 0 chr5 171948166 171948264 -31137268 + MIR SINE MIR 71 189 -73 271 253 0 36 chr5 171948704 171948787 -31136745 - MIR SINE MIR -3 259 180 422 311 50 29 chr5 171949123 171949361 -31136171 - MIR SINE MIR -5 257 15 314 107 13 93 chr5 171949468 171949543 -31135989 - L1PA10 LINE L1 0 6168 6100 388 234 0 11 chr5 171949917 171950011 -31135521 + MIR3 SINE MIR 106 198 -10 840 313 60 24 chr5 171950496 171950911 -31134621 + MLT1K LTR MaLR 159 588 0 731 298 112 35 chr5 171951299 171952013 -31133519 + L2 LINE L2 2531 3313 0 274 271 115 21 chr5 171952724 171952820 -31132712 + L2 LINE L2 3160 3264 -49 249 349 33 26 chr5 171953166 171953318 -31132214 + MIR3 SINE MIR 54 206 -2 512 270 240 10 chr5 171953482 171953686 -31131846 + MIR SINE MIR 7 257 -5 552 279 34 22 chr5 171953964 171954143 -31131389 - MIR3 SINE MIR -15 193 13 1032 187 8 51 chr5 171954165 171954228 -31131304 + MER97b DNA MER1_type? 27 91 -962 435 18 18 0 chr5 171954228 171954283 -31131249 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2157 109 3 7 chr5 171954283 171954568 -31130964 - AluSx SINE Alu -28 284 1 1032 187 8 51 chr5 171954568 171954738 -31130794 + MER97b DNA MER1_type? 89 251 -802 1852 224 73 48 chr5 171954754 171955105 -31130427 + MER97a DNA MER1_type? 364 734 -160 887 194 0 19 chr5 171955105 171955260 -31130272 + FRAM SINE Alu 2 153 -13 1852 224 73 48 chr5 171955260 171955426 -31130106 + MER97a DNA MER1_type? 734 894 0 652 294 72 21 chr5 171955993 171956228 -31129304 - MIR SINE MIR -7 255 9 386 273 28 28 chr5 171956841 171956984 -31128548 + MIR SINE MIR 112 254 -8 212 353 39 49 chr5 171957094 171957196 -31128336 + MIR SINE MIR 33 133 -75 217 259 36 80 chr5 171957310 171957422 -31128110 - MIR SINE MIR -72 136 30 507 239 168 13 chr5 171957735 171957890 -31127642 - MER5A DNA MER1_type -2 187 9 360 271 42 10 chr5 171958150 171958246 -31127286 + MIR3 SINE MIR 10 108 -100 282 234 280 9 chr5 171958793 171958900 -31126632 + MIR3 SINE MIR 11 146 -62 372 262 113 0 chr5 171958902 171959043 -31126489 - MIR SINE MIR 0 262 106 920 150 0 8 chr5 171959080 171959213 -31126319 - FLAM_A SINE Alu -1 132 1 214 334 0 25 chr5 171960408 171960488 -31125044 + MIR SINE MIR 75 151 -65 * 222 305 0 0 chr5 171960485 171960544 -31124988 - MIR SINE MIR -1 261 203 273 298 78 57 chr5 171960553 171960694 -31124838 + L3 LINE CR1 1170 1313 -264 527 300 82 5 chr5 171960698 171960918 -31124614 + MIR SINE MIR 20 256 -6 283 362 32 0 chr5 171961234 171961328 -31124204 + L2 LINE L2 3157 3253 -19 610 270 65 84 chr5 171961446 171961801 -31123731 + L2 LINE L2 2187 2534 -780 514 179 0 42 chr5 171961803 171961898 -31123634 + MER2 DNA MER2_type 2 92 -253 1590 170 91 0 chr5 171961903 171962179 -31123353 + AluJb SINE Alu 1 301 -11 5650 137 44 66 chr5 171962179 171963268 -31122264 + L1PBa LINE L1 7 1071 -5792 3688 135 53 2 chr5 171963265 171964391 -31121141 + L1PBa LINE L1 2387 3572 -3290 * 2622 218 91 48 chr5 171964493 171965514 -31120018 - L1M4c LINE L1 -4741 1905 840 267 79 0 0 chr5 171965542 171965580 -31119952 + (GA)n Simple_repeat Simple_repeat 1 38 0 2343 55 3 3 chr5 171965753 171966044 -31119488 + AluY SINE Alu 1 291 -20 1043 295 70 16 chr5 171966510 171966880 -31118652 + L1MEc LINE L1 362 751 -5970 1163 219 42 11 chr5 171966980 171967240 -31118292 - MSTA LTR MaLR -160 268 1 655 260 87 59 chr5 171967259 171967732 -31117800 + L1MEc LINE L1 1635 2163 -4517 3184 131 10 12 chr5 171968300 171968812 -31116720 - MER41B LTR ERV1 -124 511 1 463 317 127 5 chr5 171968820 171969041 -31116491 - L2 LINE L2 -383 2931 2684 518 338 6 6 chr5 171969165 171969325 -31116207 - MIR SINE MIR -98 164 5 1239 112 0 28 chr5 171969607 171969786 -31115746 - AluSq SINE Alu -139 174 1 1209 253 30 48 chr5 171971311 171971749 -31113783 - MLT1C LTR MaLR 0 467 38 208 385 86 0 chr5 171972741 171972858 -31112674 + L2 LINE L2 3142 3268 -4 272 297 0 0 chr5 171972959 171973033 -31112499 + CT-rich Low_complexity Low_complexity 3 76 0 186 271 14 125 chr5 171973519 171973663 -31111869 + MER5B DNA MER1_type 18 145 -33 301 291 70 45 chr5 171973762 171973961 -31111571 - MLT1K LTR MaLR -71 517 314 234 203 29 0 chr5 171974180 171974249 -31111283 + (TA)n Simple_repeat Simple_repeat 2 72 0 28 29 0 0 chr5 171974252 171974287 -31111245 + AT_rich Low_complexity Low_complexity 1 35 0 428 264 6 51 chr5 171974488 171974666 -31110866 + L1ME3A LINE L1 5782 5951 -219 2110 115 0 0 chr5 171974976 171975264 -31110268 + AluSg SINE Alu 1 288 -22 259 289 67 0 chr5 171976284 171976374 -31109158 + MLT1L LTR MaLR 440 535 -80 392 293 33 13 chr5 171976436 171976586 -31108946 + L3 LINE CR1 1420 1572 -5 621 300 14 14 chr5 171977668 171977878 -31107654 - MIR SINE MIR -13 249 40 239 302 180 58 chr5 171977963 171978135 -31107397 + MIR SINE MIR 20 212 -50 247 302 20 43 chr5 171978168 171978337 -31107195 + MIR SINE MIR 33 196 -61 24 32 0 0 chr5 171978539 171978570 -31106962 + AT_rich Low_complexity Low_complexity 1 31 0 579 209 164 53 chr5 171978651 171978876 -31106656 - MIR SINE MIR 0 262 13 194 158 79 0 chr5 171979318 171979356 -31106176 + MIR SINE MIR 112 152 -110 357 291 0 47 chr5 171980876 171981003 -31104529 - MER5A DNA MER1_type 0 189 69 212 313 90 15 chr5 171982119 171982186 -31103346 + MIR SINE MIR 1 72 -190 244 303 50 0 chr5 171982504 171982603 -31102929 + L3 LINE CR1 1422 1525 -52 211 154 26 0 chr5 171982649 171982688 -31102844 + (TTA)n Simple_repeat Simple_repeat 2 41 0 568 264 42 18 chr5 171982699 171982866 -31102666 - MIR SINE MIR -57 205 35 240 301 108 11 chr5 171983205 171983298 -31102234 - MIR3 SINE MIR -6 202 101 871 252 103 13 chr5 171983335 171983569 -31101963 + MIR SINE MIR 8 262 0 548 308 96 24 chr5 171983779 171983987 -31101545 + MIR SINE MIR 28 250 -12 400 358 16 32 chr5 171984174 171984361 -31101171 + MER5A DNA MER1_type 4 187 -2 198 167 0 0 chr5 171984416 171984452 -31101080 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 557 200 74 7 chr5 171985196 171985331 -31100201 - MER113 DNA MER1_type? -76 445 302 358 40 0 0 chr5 171985337 171985387 -31100145 - L1MA7 LINE L1 -1 6290 6241 2298 168 9 0 chr5 171985462 171985796 -31099736 - MER1B DNA MER1_type 0 337 1 507 217 0 0 chr5 171985796 171985879 -31099653 + Tigger3(Golem) DNA MER2_type 2947 3029 0 444 216 131 21 chr5 171986597 171986833 -31098699 + MER113 DNA MER1_type? 5 266 -255 333 330 115 22 chr5 171986861 171987131 -31098401 + MLT1H LTR MaLR 30 324 -225 260 210 130 20 chr5 171987160 171987260 -31098272 + MLT1H LTR MaLR 400 510 -39 393 119 90 0 chr5 171987296 171987363 -31098169 + MER113 DNA MER1_type? 246 318 -203 2201 164 24 0 chr5 171987365 171987694 -31097838 + MER1B DNA MER1_type 1 337 0 1678 130 24 0 chr5 171987694 171987947 -31097585 - MER7A DNA MER2_type -75 271 15 247 175 35 0 chr5 171987957 171988014 -31097518 + (TA)n Simple_repeat Simple_repeat 2 60 0 319 284 95 17 chr5 171988015 171988131 -31097401 - L3 LINE CR1 -67 1510 1386 494 243 79 14 chr5 171988932 171989072 -31096460 + MLT1J LTR MaLR 246 394 -117 422 260 160 11 chr5 171989154 171989335 -31096197 + L2 LINE L2 2291 2498 -816 462 276 37 84 chr5 171989460 171989757 -31095775 + L2 LINE L2 3031 3313 0 242 203 0 16 chr5 171990159 171990223 -31095309 + GA-rich Low_complexity Low_complexity 3 65 0 242 328 0 0 chr5 171990357 171990421 -31095111 + polypyrimidine Low_complexity Low_complexity 1 64 0 491 271 36 0 chr5 171990633 171990773 -31094759 + L2 LINE L2 2692 2836 -478 1353 149 97 53 chr5 171990775 171991180 -31094352 - L1MA6 LINE L1 0 6300 5874 4282 145 13 8 chr5 171991180 171991892 -31093640 - L1MA8 LINE L1 -323 5968 5254 2341 190 7 0 chr5 171991903 171992330 -31093202 + L1MA8 LINE L1 4826 5255 -891 235 281 98 126 chr5 171992334 171992580 -31092952 + L2 LINE L2 2825 3063 -250 188 330 226 0 chr5 171993056 171993171 -31092361 + MIR SINE MIR 116 256 -6 482 289 16 0 chr5 171993359 171993487 -31092045 - MIR SINE MIR -60 202 73 241 299 0 15 chr5 171994716 171994783 -31090749 + L2 LINE L2 2998 3063 -209 669 305 54 5 chr5 171995085 171995308 -31090224 + MIR SINE MIR 29 262 0 25 0 0 0 chr5 171995532 171995557 -31089975 + AT_rich Low_complexity Low_complexity 1 25 0 1653 218 84 34 chr5 171995845 171996331 -31089201 + MLT1F1 LTR MaLR 1 567 0 745 301 9 14 chr5 171996525 171996738 -31088794 - LTR16A LTR ERVL -105 345 134 273 98 0 0 chr5 171996888 171996929 -31088603 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 867 282 128 30 chr5 171996981 171997378 -31088154 - MLT1K LTR MaLR -113 475 40 215 221 331 39 chr5 171998008 171998135 -31087397 + MIR3 SINE MIR 20 183 -25 451 195 32 71 chr5 171998823 171998977 -31086555 - MER103 DNA DNA -18 148 1 515 204 13 70 chr5 171999751 171999908 -31085624 - MER103 DNA DNA -18 148 1 1737 187 106 8 chr5 172000133 172000492 -31085040 + MSTD LTR MaLR 2 395 -1 439 302 41 18 chr5 172000509 172000678 -31084854 + L2 LINE L2 2584 2756 -558 597 256 103 22 chr5 172000985 172001208 -31084324 + MIR SINE MIR 12 252 -10 389 245 47 0 chr5 172001347 172001453 -31084079 - L2 LINE L2 -9 3263 3153 323 288 51 17 chr5 172002666 172002784 -31082748 + MIR3 SINE MIR 79 200 -8 270 0 0 0 chr5 172002944 172002974 -31082558 + (TG)n Simple_repeat Simple_repeat 2 31 0 279 229 114 57 chr5 172003028 172003168 -31082364 - MER117 DNA MER1_type 0 197 50 234 239 0 0 chr5 172003157 172003203 -31082329 - LTR6B LTR ERV1 -415 143 98 * 364 212 66 102 chr5 172003287 172003424 -31082108 - L2 LINE L2 0 3313 3182 11093 127 13 2 chr5 172003456 172003518 -31082014 + Tigger1 DNA MER2_type 1 61 -2357 2939 60 8 16 chr5 172003518 172003888 -31081644 - L1PA8 LINE L1 -3 6169 5803 336 48 0 0 chr5 172003888 172003930 -31081602 + (TG)n Simple_repeat Simple_repeat 2 43 0 11093 127 13 2 chr5 172003930 172006260 -31079272 + Tigger1 DNA MER2_type 60 2418 0 188 325 38 0 chr5 172007274 172007354 -31078178 - MIR SINE MIR -94 114 32 180 176 0 0 chr5 172008045 172008079 -31077453 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 294 295 94 47 chr5 172008114 172008263 -31077269 - MIR3 SINE MIR -30 178 23 642 292 58 25 chr5 172008432 172008672 -31076860 + MIR SINE MIR 15 262 0 397 352 6 6 chr5 172008784 172008946 -31076586 - L3 LINE CR1 -26 1551 1390 309 250 188 19 chr5 172009286 172009446 -31076086 - L2 LINE L2 -962 2352 2166 224 381 39 17 chr5 172009727 172009908 -31075624 - L2 LINE L2 -174 3098 2914 259 347 68 27 chr5 172010351 172010498 -31075034 - MIR3 SINE MIR -53 155 3 1701 158 60 14 chr5 172010722 172011070 -31074462 - MER31A LTR ERV1 0 485 122 424 284 137 56 chr5 172012124 172012409 -31073123 + L2 LINE L2 3006 3313 0 224 345 17 17 chr5 172012445 172012561 -31072971 + MIR SINE MIR 101 216 -46 204 229 189 66 chr5 172013037 172013159 -31072373 + MIR SINE MIR 49 185 -77 2355 97 10 0 chr5 172013838 172014147 -31071385 - AluSx SINE Alu 0 312 1 197 267 67 76 chr5 172014305 172014410 -31071122 + MIR SINE MIR 38 141 -67 456 284 28 28 chr5 172014685 172014826 -31070706 + L2 LINE L2 3172 3312 -1 292 238 16 0 chr5 172015185 172015248 -31070284 + L2 LINE L2 3192 3255 -17 341 349 37 0 chr5 172015515 172015624 -31069908 - L2 LINE L2 0 3313 3201 620 256 102 0 chr5 172015899 172016075 -31069457 + MIR SINE MIR 63 256 -6 485 205 0 0 chr5 172016179 172016301 -31069231 - L1MA4 LINE L1 -4 6296 6175 337 325 35 49 chr5 172016381 172016584 -31068948 + MIR3 SINE MIR 3 202 -6 182 233 23 0 chr5 172017111 172017154 -31068378 + L2 LINE L2 3215 3258 -14 218 239 23 34 chr5 172017179 172017267 -31068265 + GA-rich Low_complexity Low_complexity 1 87 0 340 181 138 0 chr5 172017838 172017932 -31067600 - L1MA9 LINE L1 -38 6274 6168 450 178 75 20 chr5 172017943 172018089 -31067443 - MER113 DNA MER1_type? -316 205 52 460 301 57 16 chr5 172018134 172018257 -31067275 - MIR3 SINE MIR -49 159 32 817 225 17 0 chr5 172018257 172018435 -31067097 - MSTD LTR MaLR 0 396 216 372 167 71 0 chr5 172018510 172018594 -31066938 - MSTD LTR MaLR -306 90 1 315 337 6 61 chr5 172019007 172019170 -31066362 + MIR3 SINE MIR 32 185 -23 1850 196 47 13 chr5 172019626 172020009 -31065523 - MSTD LTR MaLR 0 396 1 313 261 0 0 chr5 172020295 172020360 -31065172 + MER5B DNA MER1_type 61 125 -53 2990 182 11 22 chr5 172020360 172020992 -31064540 - MER49 LTR ERV1 0 923 299 4630 30 0 0 chr5 172020992 172021532 -31064000 - L1PA3 LINE L1 0 6155 5616 6131 22 0 0 chr5 172021532 172022525 -31063007 + L1PA3 LINE L1 4628 5620 -535 1522 176 56 20 chr5 172022525 172022827 -31062705 - MER49 LTR ERV1 -610 313 1 190 250 0 0 chr5 172022831 172022875 -31062657 - MER5B DNA MER1_type -127 51 8 374 250 30 30 chr5 172023053 172023185 -31062347 - LTR16A LTR ERVL 0 450 319 754 122 31 75 chr5 172023320 172023604 -31061928 - MER1B DNA MER1_type 0 339 1 799 304 119 27 chr5 172023704 172024335 -31061197 + L2 LINE L2 2348 3041 -231 653 277 85 13 chr5 172024433 172024657 -31060875 - MIR SINE MIR -2 260 21 253 357 14 14 chr5 172025175 172025318 -31060214 - MIR3 SINE MIR -52 156 11 969 182 39 13 chr5 172025633 172025864 -31059668 + L1MB4 LINE L1 5944 6180 0 639 257 118 30 chr5 172026078 172026315 -31059217 + MIR SINE MIR 1 258 -4 214 351 0 0 chr5 172026315 172026392 -31059140 + C-rich Low_complexity Low_complexity 6 82 0 322 210 214 47 chr5 172026548 172026684 -31058848 - MIR SINE MIR -62 146 41 1873 164 0 23 chr5 172026769 172027074 -31058458 + AluSx SINE Alu 1 298 -14 216 300 57 0 chr5 172027161 172027231 -31058301 + MIR3 SINE MIR 2 75 -133 311 148 0 45 chr5 172027289 172027377 -31058155 + (TCCCC)n Simple_repeat Simple_repeat 5 88 0 2852 91 21 30 chr5 172028212 172028289 -31057243 + L1PA11 LINE L1 5749 5825 -349 2138 108 3 3 chr5 172028289 172028576 -31056956 + AluSq SINE Alu 1 287 -26 2852 91 21 30 chr5 172028576 172028928 -31056604 + L1PA11 LINE L1 5825 6174 0 182 269 19 0 chr5 172029043 172029095 -31056437 - L2 LINE L2 -206 3066 3014 6272 192 41 44 chr5 172029911 172031560 -31053972 - L1MC3 LINE L1 -1 7784 6141 1161 204 9 4 chr5 172031560 172031790 -31053742 - MER68 LTR ERV1 -331 231 1 2526 186 66 28 chr5 172031790 172032821 -31052711 - L1MC3 LINE L1 -791 5355 4850 2191 126 3 0 chr5 172032821 172033115 -31052417 + AluSx SINE Alu 1 295 -17 2526 186 66 28 chr5 172033115 172033229 -31052303 - L1MC3 LINE L1 -1296 4850 4742 22 0 0 0 chr5 172033778 172033800 -31051732 + AT_rich Low_complexity Low_complexity 1 22 0 859 223 142 45 chr5 172034409 172034456 -31051076 + MLT1D LTR MaLR 1 42 -463 2077 166 0 0 chr5 172034456 172034764 -31050768 + AluSx SINE Alu 3 310 -2 859 223 142 45 chr5 172034764 172035169 -31050363 + MLT1D LTR MaLR 42 478 -27 653 75 66 0 chr5 172035164 172035270 -31050262 + MER2 DNA MER2_type 98 210 -135 * 29 70 0 0 chr5 172035276 172035333 -31050199 + AT_rich Low_complexity Low_complexity 1 57 0 649 169 41 151 chr5 172035869 172036088 -31049444 - MER20 DNA MER1_type -24 195 1 274 281 157 0 chr5 172036121 172036210 -31049322 + MER91B DNA MER1_type 1 103 -87 2534 337 101 21 chr5 172036392 172036442 -31049090 + L2 LINE L2 745 790 -2524 1309 143 35 13 chr5 172036442 172036673 -31048859 + MER46A DNA MER2_type 1 236 0 2534 337 101 21 chr5 172036673 172038284 -31047248 + L2 LINE L2 790 2539 -775 364 303 36 62 chr5 172038294 172038489 -31047043 - MER67A LTR ERV1 0 543 395 250 246 0 14 chr5 172038611 172038680 -31046852 - MER67B LTR ERV1 -547 114 47 230 347 71 0 chr5 172038713 172038811 -31046721 + L2 LINE L2 2554 2658 -656 1434 125 45 35 chr5 172038834 172039121 -31046411 + L1M4 LINE L1 5410 5699 -485 524 328 96 4 chr5 172039147 172039397 -31046135 - MLT1I LTR MaLR -118 291 19 611 308 42 62 chr5 172039411 172039817 -31045715 + L2 LINE L2 2916 3313 0 989 284 123 31 chr5 172040143 172040827 -31044705 - L2 LINE L2 -8 3305 2545 687 275 95 15 chr5 172040831 172041104 -31044428 - L2 LINE L2 -1278 2036 1742 1044 197 4 94 chr5 172041748 172041992 -31043540 + MER58A DNA MER1_type 1 222 -2 244 251 135 116 chr5 172043561 172043776 -31041756 + L3 LINE CR1 1349 1567 -10 21 36 0 0 chr5 172044191 172044219 -31041313 + AT_rich Low_complexity Low_complexity 1 28 0 815 208 31 51 chr5 172044305 172044537 -31040995 - MLT1F1 LTR MaLR -2 652 340 519 198 32 117 chr5 172044531 172044648 -31040884 - MLT1E LTR MaLR -328 239 156 * 2125 108 7 13 chr5 172044648 172044953 -31040579 + AluSg SINE Alu 1 303 -7 519 198 32 117 chr5 172044953 172045097 -31040435 - MLT1E LTR MaLR -411 156 1 258 408 32 0 chr5 172045216 172045373 -31040159 + MIR3 SINE MIR 32 193 -15 580 203 203 0 chr5 172045430 172045573 -31039959 - MER20 DNA MER1_type 0 219 48 2840 0 0 0 chr5 172045684 172045988 -31039544 - AluYa5 SINE Alu -7 304 1 5951 102 29 0 chr5 172046233 172047183 -31038349 - L1PA10 LINE L1 -4 6164 5190 4015 121 0 8 chr5 172047183 172047828 -31037704 - L1PA10 LINE L1 -1525 4621 3982 1506 228 89 24 chr5 172047836 172048252 -31037280 + MLT2B1 LTR ERVL 1 443 -77 440 167 22 0 chr5 172048255 172048345 -31037187 + CT-rich Low_complexity Low_complexity 3 94 0 616 206 15 0 chr5 172048562 172048693 -31036839 + MER31B LTR ERV1 1 133 -333 589 218 36 31 chr5 172048775 172048968 -31036564 + MER31B LTR ERV1 273 466 0 26 30 0 0 chr5 172049269 172049302 -31036230 + AT_rich Low_complexity Low_complexity 1 33 0 193 398 48 0 chr5 172049363 172049446 -31036086 + MIR SINE MIR 38 124 -84 581 273 84 38 chr5 172049453 172049691 -31035841 + MIR SINE MIR 4 252 -10 609 263 91 35 chr5 172050310 172050508 -31035024 + MER63A DNA MER1_type 2 210 0 1573 171 41 35 chr5 172050943 172051288 -31034244 - MER7A DNA MER2_type 0 346 2 282 320 88 50 chr5 172052794 172052975 -31032557 - L2 LINE L2 -216 3056 2869 13833 133 39 9 chr5 172053474 172055821 -31029711 - Tigger1 DNA MER2_type 0 2418 1 317 287 115 51 chr5 172057240 172057397 -31028135 + MIR SINE MIR 23 189 -73 227 272 62 12 chr5 172057586 172057667 -31027865 - L2 LINE L2 -1 3312 3228 180 0 0 0 chr5 172058930 172058950 -31026582 + (T)n Simple_repeat Simple_repeat 1 20 0 269 301 48 10 chr5 172058951 172059054 -31026478 - MIR SINE MIR -119 143 37 252 0 0 0 chr5 172060283 172060311 -31025221 + (CA)n Simple_repeat Simple_repeat 2 29 0 511 276 0 24 chr5 172060353 172060523 -31025009 + L1MC5 LINE L1 7746 7911 -50 1861 106 49 0 chr5 172060708 172061003 -31024529 + AluSx SINE Alu 4 311 0 233 267 20 89 chr5 172061759 172061860 -31023672 - MIR SINE MIR -57 151 58 225 346 89 10 chr5 172062314 172062415 -31023117 - MIR SINE MIR -63 145 37 319 210 0 0 chr5 172062675 172062737 -31022795 + MER103 DNA DNA 59 120 -46 192 246 33 16 chr5 172063218 172063279 -31022253 + L3 LINE CR1 1198 1259 -318 406 320 51 39 chr5 172063328 172063506 -31022026 + MLT1K LTR MaLR 27 206 -382 229 342 76 40 chr5 172063668 172063893 -31021639 + MLT1K LTR MaLR 353 585 -3 395 333 72 11 chr5 172063896 172064076 -31021456 + L3 LINE CR1 1260 1450 -127 219 268 84 0 chr5 172064407 172064478 -31021054 + MIR SINE MIR 186 262 0 183 322 95 59 chr5 172066128 172066432 -31019100 - L2 LINE L2 -70 3243 2929 445 308 38 13 chr5 172067280 172067439 -31018093 - MIR3 SINE MIR -8 200 38 257 141 47 0 chr5 172067811 172067896 -31017636 + (TA)n Simple_repeat Simple_repeat 2 90 0 335 301 117 25 chr5 172068104 172068267 -31017265 + MER5A DNA MER1_type 8 185 -4 240 143 0 0 chr5 172069290 172069332 -31016200 + (A)n Simple_repeat Simple_repeat 1 42 0 906 330 113 22 chr5 172070054 172070598 -31014934 - L2 LINE L2 0 3313 2721 206 254 0 79 chr5 172070809 172070872 -31014660 - MIR SINE MIR -60 148 91 981 337 33 18 chr5 172070885 172071280 -31014252 - MLT1I LTR MaLR -8 401 1 2133 156 11 0 chr5 172071509 172071867 -31013665 - L1PB1 LINE L1 -8 6143 5782 499 81 78 12 chr5 172071872 172072101 -31013431 + (TA)n Simple_repeat Simple_repeat 1 244 0 4076 163 13 1 chr5 172072103 172073423 -31012109 - L1PB1 LINE L1 -363 5788 4457 1486 106 0 249 chr5 172073427 172073813 -31011719 - AluSx SINE Alu -22 290 1 592 277 28 17 chr5 172073944 172074121 -31011411 + MIR SINE MIR 11 189 -73 31 44 0 0 chr5 172074144 172074189 -31011343 + AT_rich Low_complexity Low_complexity 1 45 0 235 254 103 71 chr5 172074434 172074560 -31010972 + L3 LINE CR1 1135 1264 -313 364 367 20 13 chr5 172074706 172074856 -31010676 - LTR16C LTR ERVL -260 231 81 370 252 34 25 chr5 172075005 172075124 -31010408 - MIR SINE MIR 0 262 143 937 305 97 5 chr5 172075173 172075543 -31009989 - MLT1I LTR MaLR 0 409 6 333 152 59 45 chr5 172075907 172075995 -31009537 - MLT1I LTR MaLR -6 416 326 202 329 0 53 chr5 172076431 172076507 -31009025 + L3 LINE CR1 968 1039 -538 558 198 9 2 chr5 172076551 172076684 -31008848 - L1M LINE L1 -761 5406 5270 589 250 14 71 chr5 172077319 172077531 -31008001 - MIR SINE MIR -39 223 24 212 327 0 27 chr5 172078110 172078220 -31007312 - L2 LINE L2 -286 2986 2880 2491 107 4 34 chr5 172078220 172078780 -31006752 + MER51A LTR ERV1 1 634 0 606 302 102 22 chr5 172078782 172079057 -31006475 - L2 LINE L2 -473 2841 2545 331 240 67 19 chr5 172079070 172079174 -31006358 + MIR SINE MIR 37 145 -117 5521 157 19 25 chr5 172079177 172081094 -31004438 + L1PA7 LINE L1 4263 6164 0 1201 139 56 0 chr5 172081133 172081348 -31004184 + L1PA13 LINE L1 5933 6159 -4 1232 203 7 1 chr5 172081564 172081874 -31003658 + MER2 DNA MER2_type 1 345 0 1393 155 0 0 chr5 172082238 172082445 -31003087 + AluSx SINE Alu 1 207 -105 452 252 168 0 chr5 172082536 172082691 -31002841 + MER5A DNA MER1_type 9 189 0 181 241 0 37 chr5 172082691 172082743 -31002789 + L3 LINE CR1 1526 1575 -2 376 252 48 19 chr5 172082926 172083029 -31002503 - MIR3 SINE MIR -16 192 87 243 183 21 11 chr5 172083082 172083175 -31002357 + CT-rich Low_complexity Low_complexity 1 94 0 309 26 0 0 chr5 172083182 172083220 -31002312 + (CA)n Simple_repeat Simple_repeat 1 38 0 196 328 0 15 chr5 172083540 172083607 -31001925 + MIR SINE MIR 8 73 -189 278 352 31 23 chr5 172083756 172083884 -31001648 + L2 LINE L2 3116 3244 -28 770 263 45 16 chr5 172084094 172084337 -31001195 + MIR SINE MIR 7 256 -6 260 279 19 0 chr5 172084573 172084677 -31000855 - L1M4 LINE L1 -3365 2781 2676 678 358 74 32 chr5 172085626 172086594 -30998938 - L2 LINE L2 -211 3061 2053 248 275 184 9 chr5 172086893 172087002 -30998530 - L2 LINE L2 -3 3269 3142 339 379 34 5 chr5 172087316 172087522 -30998010 - L2 LINE L2 -2392 922 711 585 42 0 0 chr5 172088159 172088231 -30997301 + (TCCA)n Simple_repeat Simple_repeat 1 72 0 199 307 27 13 chr5 172088231 172088296 -30997236 - L2 LINE L2 -11 3261 3193 319 294 24 0 chr5 172089345 172089430 -30996102 - Tigger5 DNA MER2_type -2235 88 2 283 317 87 49 chr5 172089430 172089613 -30995919 - MIR3 SINE MIR -18 190 1 722 309 64 78 chr5 172090753 172091254 -30994278 + L2 LINE L2 2820 3313 0 205 329 44 51 chr5 172091487 172091624 -30993908 + MIR SINE MIR 11 146 -116 409 275 153 18 chr5 172092175 172092404 -30993128 + MIR SINE MIR 3 262 0 208 246 43 0 chr5 172092495 172092564 -30992968 + MIR3 SINE MIR 119 190 -18 263 352 11 11 chr5 172093221 172093309 -30992223 - MIR SINE MIR -57 151 64 27 29 0 0 chr5 172093364 172093398 -30992134 + AT_rich Low_complexity Low_complexity 1 34 0 2957 304 77 44 chr5 172093564 172095117 -30990415 - L2 LINE L2 -1354 1960 358 393 318 166 7 chr5 172095275 172095426 -30990106 - MER5A DNA MER1_type -8 181 7 254 324 77 33 chr5 172095744 172095926 -30989606 + MIR SINE MIR 11 200 -62 610 275 0 0 chr5 172096677 172096815 -30988717 + MIR SINE MIR 50 187 -75 3162 230 31 47 chr5 172096879 172096920 -30988612 + L1ME1 LINE L1 5255 5295 -871 212 0 36 0 chr5 172096920 172096948 -30988584 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3162 230 31 47 chr5 172096948 172097827 -30987705 + L1ME1 LINE L1 5295 6161 -5 392 394 0 0 chr5 172097960 172098102 -30987430 - L2 LINE L2 -5 3267 3126 3042 145 37 27 chr5 172098141 172098741 -30986791 - L1PB4 LINE L1 -5 6151 5546 500 268 180 0 chr5 172098954 172099148 -30986384 + MIR SINE MIR 16 244 -18 193 276 105 29 chr5 172100633 172100738 -30984794 + MIR3 SINE MIR 82 194 -14 426 304 32 32 chr5 172100790 172100948 -30984584 - MIR SINE MIR -71 191 34 400 240 56 80 chr5 172101027 172101091 -30984441 + MIR SINE MIR 6 67 -195 2352 88 0 7 chr5 172101091 172101399 -30984133 - AluY SINE Alu -5 306 1 400 240 56 80 chr5 172101399 172101459 -30984073 + MIR SINE MIR 67 127 -135 400 259 70 90 chr5 172101729 172101930 -30983602 - MIR SINE MIR -65 197 1 237 65 0 0 chr5 172101971 172102002 -30983530 + (TA)n Simple_repeat Simple_repeat 1 31 0 207 209 75 15 chr5 172102722 172102789 -30982743 + L2 LINE L2 3176 3246 -67 317 298 183 0 chr5 172102811 172102915 -30982617 - L2 LINE L2 -5 3267 3145 256 259 157 61 chr5 172103302 172103449 -30982083 + MIR SINE MIR 32 192 -70 195 129 0 0 chr5 172103465 172103496 -30982036 + (CCA)n Simple_repeat Simple_repeat 1 31 0 792 256 57 9 chr5 172103497 172103727 -30981805 - MIR SINE MIR -8 254 14 2328 56 3 26 chr5 172104987 172105289 -30980243 - AluY SINE Alu -16 295 1 2850 209 17 57 chr5 172106784 172107491 -30978041 + LTR8 LTR ERV1 13 691 0 363 339 100 0 chr5 172107682 172107812 -30977720 - MIR3 SINE MIR -8 200 58 230 352 56 9 chr5 172108297 172108405 -30977127 + MIR SINE MIR 29 141 -121 517 282 55 17 chr5 172108471 172108652 -30976880 + MER5A DNA MER1_type 1 188 -1 302 316 43 26 chr5 172109982 172110099 -30975433 + MIR3 SINE MIR 42 160 -48 189 0 0 0 chr5 172110597 172110618 -30974914 + (TTAAA)n Simple_repeat Simple_repeat 1 21 0 3991 86 48 0 chr5 172110618 172111177 -30974355 - L1PA10 LINE L1 -8 6160 5575 1492 83 26 9 chr5 172111177 172111542 -30973990 + L1P4 LINE L1 5123 5489 -679 1846 113 4 8 chr5 172111888 172112191 -30973341 + AluSg SINE Alu 37 310 0 248 258 31 62 chr5 172112722 172112819 -30972713 + MIR SINE MIR 110 203 -59 832 288 118 42 chr5 172113141 172113367 -30972165 - L2 LINE L2 -4 3309 3102 1090 267 156 10 chr5 172113367 172113772 -30971760 + LTR16B LTR ERVL 1 464 0 832 288 118 42 chr5 172113772 172114097 -30971435 - L2 LINE L2 -211 3102 2712 274 322 25 34 chr5 172114851 172114969 -30970563 - L2 LINE L2 -15 3298 3182 320 335 25 43 chr5 172114995 172115156 -30970376 + MIR SINE MIR 41 198 -64 200 192 39 51 chr5 172115184 172115262 -30970270 + T-rich Low_complexity Low_complexity 2 78 0 4035 73 11 0 chr5 172115270 172115816 -30969716 - L1PA8 LINE L1 0 6172 5621 8799 184 26 49 chr5 172115832 172117042 -30968490 - L1MC3 LINE L1 -6 7779 6640 1637 144 58 76 chr5 172117042 172117424 -30968108 + THE1C LTR MaLR 1 375 0 8799 184 26 49 chr5 172117424 172118384 -30967148 - L1MC3 LINE L1 -1145 6640 5659 211 277 0 0 chr5 172118496 172118543 -30966989 - MIR SINE MIR -163 99 53 25 31 0 0 chr5 172118894 172118926 -30966606 + AT_rich Low_complexity Low_complexity 1 32 0 758 258 70 8 chr5 172118930 172119133 -30966399 - MIR SINE MIR -1 261 48 451 318 34 34 chr5 172120069 172120157 -30965375 - L2 LINE L2 0 3272 3182 1868 175 3 0 chr5 172120157 172120454 -30965078 - AluJo SINE Alu -14 298 1 451 318 34 34 chr5 172120454 172120513 -30965019 - L2 LINE L2 -89 3183 3125 4380 203 79 100 chr5 172121162 172121753 -30963779 - L1MC3 LINE L1 -2 7783 7181 301 247 11 43 chr5 172121753 172121846 -30963686 - MLT1F1 LTR MaLR -443 124 35 4380 203 79 100 chr5 172121846 172122219 -30963313 - L1MC3 LINE L1 -604 7181 6801 1468 92 0 68 chr5 172122219 172122468 -30963064 - L1MA1 LINE L1 0 6302 6071 4380 203 79 100 chr5 172122468 172123479 -30962053 - L1MC3 LINE L1 -984 6801 5849 27 62 0 37 chr5 172123667 172123748 -30961784 + AT_rich Low_complexity Low_complexity 1 78 0 305 321 42 12 chr5 172124044 172124209 -30961323 + MLT1J LTR MaLR 342 511 0 21 57 0 0 chr5 172124526 172124561 -30960971 + AT_rich Low_complexity Low_complexity 1 35 0 425 277 125 22 chr5 172124571 172124755 -30960777 - MIR SINE MIR -26 236 34 357 233 56 0 chr5 172125660 172125750 -30959782 - L2 LINE L2 -1 3312 3218 324 70 0 0 chr5 172125931 172125974 -30959558 + (TG)n Simple_repeat Simple_repeat 2 44 0 321 299 80 53 chr5 172126082 172126209 -30959323 - L2 LINE L2 -13 3300 3165 852 247 188 18 chr5 172126209 172126602 -30958930 - LTR16B LTR ERVL -4 460 1 321 299 80 53 chr5 172126602 172126661 -30958871 - L2 LINE L2 -148 3165 3109 204 330 50 111 chr5 172126713 172127092 -30958440 - L2 LINE L2 -337 2977 2622 363 385 42 0 chr5 172127198 172127364 -30958168 + MIR SINE MIR 60 232 -30 532 263 9 18 chr5 172128082 172128244 -30957288 - MER5A DNA MER1_type -4 185 20 * 612 185 172 13 chr5 172128238 172128389 -30957143 + MER5A DNA MER1_type 15 189 0 832 179 75 42 chr5 172128397 172128609 -30956923 + MER20 DNA MER1_type 1 219 0 337 294 12 0 chr5 172128737 172128822 -30956710 + MIR SINE MIR 12 97 -165 2219 182 60 28 chr5 172128824 172129356 -30956176 - MER89 LTR ERV1 0 559 11 351 290 107 15 chr5 172129356 172129487 -30956045 + MIR SINE MIR 110 252 -10 380 280 157 14 chr5 172129693 172129908 -30955624 + MIR SINE MIR 13 262 0 200 348 34 11 chr5 172130076 172130165 -30955367 + MER5A DNA MER1_type 95 185 -4 271 281 18 41 chr5 172131415 172131586 -30953946 + CT-rich Low_complexity Low_complexity 4 170 0 1586 187 11 7 chr5 172133024 172133297 -30952235 + AluJb SINE Alu 21 294 -18 216 0 0 0 chr5 172133949 172133973 -30951559 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 311 208 22 34 chr5 172134453 172134631 -30950901 + CT-rich Low_complexity Low_complexity 1 176 0 265 204 34 11 chr5 172134652 172134740 -30950792 + T-rich Low_complexity Low_complexity 3 92 0 1660 186 92 82 chr5 172136079 172136525 -30949007 + MLT1D LTR MaLR 1 454 -51 261 0 0 0 chr5 172136525 172136554 -30948978 + (TG)n Simple_repeat Simple_repeat 1 29 0 1660 186 92 82 chr5 172136554 172136607 -30948925 + MLT1D LTR MaLR 454 505 0 322 325 123 0 chr5 172137706 172137869 -30947663 + MIR SINE MIR 17 199 -63 403 260 10 20 chr5 172137871 172137971 -30947561 - MER5B DNA MER1_type -3 175 77 430 303 83 9 chr5 172138305 172138533 -30946999 - L1ME LINE L1 -310 5811 5567 313 310 49 43 chr5 172138549 172138733 -30946799 - MLT1L LTR MaLR -2 613 429 668 178 83 39 chr5 172139592 172139772 -30945760 - MER5A DNA MER1_type -1 188 1 374 315 67 24 chr5 172139802 172139967 -30945565 + MIR SINE MIR 13 184 -78 257 245 52 136 chr5 172140129 172140284 -30945248 + L2 LINE L2 3171 3312 -1 574 212 55 12 chr5 172142291 172142456 -30943076 - L1MCc LINE L1 -5459 964 793 337 293 125 31 chr5 172142629 172143021 -30942511 + L1MC4a LINE L1 5454 5882 -1926 1336 165 22 84 chr5 172143056 172143507 -30942025 + MLT2C1 LTR ERVL 5 397 0 21 36 0 0 chr5 172143822 172143850 -30941682 + AT_rich Low_complexity Low_complexity 1 28 0 352 276 111 63 chr5 172143921 172144318 -30941214 - L1ME3A LINE L1 -310 5860 5444 354 304 89 0 chr5 172144468 172144603 -30940929 - L1MEd LINE L1 -5326 793 647 1346 184 92 37 chr5 172144629 172144901 -30940631 - AluJo SINE Alu -13 289 3 10148 35 3 149 chr5 172144938 172146561 -30938971 - SVA Other Other 0 1386 1 407 295 18 9 chr5 172146563 172146675 -30938857 + (TTAGGG)n Simple_repeat Simple_repeat 6 118 0 754 328 78 25 chr5 172146679 172147246 -30938286 - L1MEd LINE L1 -5503 616 20 202 159 0 63 chr5 172147289 172147352 -30938180 + T-rich Low_complexity Low_complexity 1 59 0 24 32 0 0 chr5 172148583 172148614 -30936918 + AT_rich Low_complexity Low_complexity 1 31 0 6604 66 17 5 chr5 172148751 172150094 -30935438 + L1PA7 LINE L1 4799 6152 -2 253 333 0 0 chr5 172150353 172150422 -30935110 + L2 LINE L2 2992 3060 -212 348 342 62 12 chr5 172150674 172150835 -30934697 - MIR3 SINE MIR -21 187 19 240 302 115 22 chr5 172150868 172151007 -30934525 - MIR SINE MIR -17 245 94 2609 119 33 12 chr5 172151742 172152161 -30933371 + L1PA16 LINE L1 5729 6156 -10 464 263 42 0 chr5 172152273 172152391 -30933141 - MIR SINE MIR -62 200 78 300 223 115 51 chr5 172153049 172153206 -30932326 - L1ME LINE L1 -425 5696 5530 2072 120 0 54 chr5 172153908 172154225 -30931307 + AluSc SINE Alu 1 300 -9 1543 213 113 91 chr5 172154537 172155172 -30930360 - MLT1E1 LTR MaLR 0 654 6 655 204 24 57 chr5 172155811 172156022 -30929510 - L1MC4 LINE L1 -25 8017 7814 749 289 71 6 chr5 172156028 172156392 -30929140 - L1MDb LINE L1 -2391 4253 3866 3927 215 109 55 chr5 172156425 172156895 -30928637 - L1MC4 LINE L1 0 8042 7599 1699 176 58 9 chr5 172156895 172157224 -30928308 + MER7A DNA MER2_type 1 343 -3 3927 215 109 55 chr5 172157224 172158350 -30927182 - L1MC4 LINE L1 -443 7599 6359 450 226 91 5 chr5 172158452 172158673 -30926859 - L1MDb LINE L1 -2845 3799 3560 1150 254 41 65 chr5 172158685 172159383 -30926149 - L1MDb LINE L1 -3196 3448 2768 2742 130 22 0 chr5 172159383 172159798 -30925734 - MSTA LTR MaLR -2 426 3 1150 254 41 65 chr5 172159798 172159848 -30925684 - L1MDb LINE L1 -3876 2768 2718 772 189 136 42 chr5 172159849 172160037 -30925495 - MER2 DNA MER2_type -1 344 122 1763 164 29 15 chr5 172160037 172160378 -30925154 + MER7A DNA MER2_type 2 345 -1 772 189 136 42 chr5 172160378 172160453 -30925079 - MER2 DNA MER2_type -223 122 56 612 273 156 39 chr5 172160473 172161291 -30924241 - L1MDb LINE L1 -4226 2599 1674 310 228 44 7 chr5 172161745 172161850 -30923682 - L1MDb LINE L1 -5017 1614 1428 559 305 75 53 chr5 172161886 172162825 -30922707 - L1MDb LINE L1 -5105 1529 571 643 250 91 8 chr5 172162859 172163111 -30922421 - Charlie5 DNA MER1_type 0 2624 2352 * 668 225 70 5 chr5 172163110 172163297 -30922235 - Charlie5 DNA MER1_type -2413 199 1 24 53 0 0 chr5 172163363 172163401 -30922131 + AT_rich Low_complexity Low_complexity 1 38 0 199 333 177 0 chr5 172164293 172164389 -30921143 - L2 LINE L2 -14 3258 3146 329 322 87 39 chr5 172164394 172164602 -30920930 - MIR SINE MIR -34 228 11 301 313 73 28 chr5 172164923 172165102 -30920430 - MIR3 SINE MIR -13 195 9 1880 149 49 6 chr5 172165151 172165480 -30920052 - MER61A LTR ERV1 0 343 1 214 194 0 0 chr5 172166059 172166095 -30919437 - L3 LINE CR1 -113 1464 1429 439 377 3 39 chr5 172166096 172166380 -30919152 - L3 LINE CR1 -123 1454 1181 201 74 0 0 chr5 172166751 172166778 -30918754 + (A)n Simple_repeat Simple_repeat 1 27 0 725 202 77 30 chr5 172166895 172167063 -30918469 + FRAM SINE Alu 1 176 0 2350 67 0 0 chr5 172167326 172167646 -30917886 - AluY SINE Alu 0 320 1 669 236 130 75 chr5 172168860 172169275 -30916257 - LTR16A1 LTR ERVL 0 457 20 2453 97 0 0 chr5 172169403 172169714 -30915818 - AluSx SINE Alu -1 311 1 359 336 9 50 chr5 172170040 172170260 -30915272 - HERV16 LTR ERVL -2469 2527 2317 1636 167 8 0 chr5 172170273 172170530 -30915002 - AluJo SINE Alu -30 282 24 912 273 42 73 chr5 172170574 172171475 -30914057 - HERV16 LTR ERVL -2939 2057 1386 694 327 43 9 chr5 172171545 172171869 -30913663 - HERV16 LTR ERVL -3724 1272 938 596 329 76 48 chr5 172171971 172172390 -30913142 - HERV16 LTR ERVL -4182 814 384 185 374 42 48 chr5 172172844 172173010 -30912522 + MER5A DNA MER1_type 18 182 -7 916 280 44 110 chr5 172173593 172174238 -30911294 + L2 LINE L2 2462 3070 -243 933 90 15 0 chr5 172174278 172174412 -30911120 - AluY SINE Alu -2 309 174 248 235 17 96 chr5 172174419 172174534 -30910998 + L2 LINE L2 3111 3216 -97 384 288 65 24 chr5 172174775 172174945 -30910587 - MIR3 SINE MIR -26 182 6 2625 134 17 0 chr5 172175094 172175504 -30910028 - HSMAR1 DNA Mariner 0 1287 871 1289 197 4 4 chr5 172175509 172175737 -30909795 - AluJo SINE Alu -44 268 41 393 234 28 0 chr5 172176062 172176169 -30909363 - MER103 DNA DNA -1 165 56 1172 195 36 17 chr5 172176326 172176659 -30908873 + MSTD LTR MaLR 1 396 0 1964 171 0 0 chr5 172177638 172177947 -30907585 + AluSx SINE Alu 2 310 -2 2405 100 3 0 chr5 172179113 172179424 -30906108 - AluSx SINE Alu 0 312 1 318 324 94 18 chr5 172179739 172179909 -30905623 + MIR SINE MIR 18 200 -62 523 244 182 0 chr5 172180035 172180244 -30905288 - MIR SINE MIR 0 262 16 1088 300 111 34 chr5 172180832 172181699 -30903833 - L2 LINE L2 -43 3270 2336 482 309 29 54 chr5 172181711 172181915 -30903617 + MIR3 SINE MIR 4 202 -6 763 243 29 0 chr5 172182201 172182374 -30903158 - MER5B DNA MER1_type 0 178 1 2312 116 41 8 chr5 172182531 172182894 -30902638 - THE1C LTR MaLR 0 375 1 1869 139 0 14 chr5 172183080 172183360 -30902172 - AluSx SINE Alu -18 294 19 262 254 154 18 chr5 172183388 172183498 -30902034 - MER117 DNA MER1_type -36 161 37 204 67 0 0 chr5 172183540 172183570 -30901962 + (TG)n Simple_repeat Simple_repeat 2 31 0 266 274 94 17 chr5 172184317 172184434 -30901098 + MIR SINE MIR 2 127 -135 418 321 36 25 chr5 172185250 172185445 -30900087 - MIR3 SINE MIR -6 202 3 642 278 145 4 chr5 172186079 172186306 -30899226 - MIR SINE MIR 0 262 4 4404 59 0 0 chr5 172187178 172187724 -30897808 + L1PA5 LINE L1 5609 6154 0 203 340 31 10 chr5 172188348 172188445 -30897087 + L2 LINE L2 2657 2755 -559 933 199 31 5 chr5 172188457 172188653 -30896879 + MER58A DNA MER1_type 24 224 0 2236 246 105 29 chr5 172188819 172189766 -30895766 - L1ME3A LINE L1 -8 6162 5111 2814 13 0 0 chr5 172189766 172190077 -30895455 - AluY SINE Alu 0 311 1 2236 246 105 29 chr5 172190077 172190281 -30895251 - L1ME3A LINE L1 -1059 5111 4924 370 261 17 9 chr5 172190297 172190412 -30895120 - L1PA16 LINE L1 -9 6157 6042 4073 146 14 18 chr5 172190412 172191126 -30894406 - MER50 LTR ERV1 -23 711 1 7038 184 20 8 chr5 172191138 172193516 -30892016 - L1PA16 LINE L1 -124 6042 3638 227 200 17 0 chr5 172193727 172193787 -30891745 + L1MC4 LINE L1 6640 6700 -1342 218 170 19 19 chr5 172193787 172193840 -30891692 + (TA)n Simple_repeat Simple_repeat 1 53 0 1030 279 55 20 chr5 172193917 172194477 -30891055 - L1ME3A LINE L1 -1480 4666 4087 466 336 88 0 chr5 172194755 172194972 -30890560 - MIR SINE MIR -5 257 22 423 350 137 44 chr5 172194990 172195356 -30890176 - L3 LINE CR1 -208 1369 970 395 298 15 53 chr5 172195357 172195488 -30890044 + MIR SINE MIR 24 149 -113 191 237 0 0 chr5 172195587 172195625 -30889907 - L3 LINE CR1 -607 970 933 440 283 35 41 chr5 172196493 172196638 -30888894 + MER5A DNA MER1_type 46 189 0 197 269 19 102 chr5 172196644 172196698 -30888834 - MIR3 SINE MIR -2 206 164 787 223 17 6 chr5 172196698 172196873 -30888659 + MER5B DNA MER1_type 1 177 -1 197 269 19 102 chr5 172196873 172196926 -30888606 - MIR3 SINE MIR -44 164 108 272 234 0 31 chr5 172197393 172197457 -30888075 + L2 LINE L2 3209 3270 -2 475 322 55 89 chr5 172198039 172198455 -30887077 - L2 LINE L2 -6 3266 2865 228 200 0 0 chr5 172198649 172198689 -30886843 - L2 LINE L2 -9 3304 3265 397 349 60 6 chr5 172198791 172198957 -30886575 + MIR SINE MIR 82 256 -6 183 100 0 0 chr5 172199821 172199851 -30885681 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 291 237 21 32 chr5 172200834 172200927 -30884605 + MIR3 SINE MIR 78 169 -39 484 250 162 0 chr5 172200938 172201086 -30884446 + MIR3 SINE MIR 16 187 -21 259 313 207 60 chr5 172201418 172202032 -30883500 + L3 LINE CR1 866 1569 -8 472 227 34 103 chr5 172202053 172202229 -30883303 + MIR SINE MIR 45 206 -56 740 303 17 13 chr5 172202318 172202556 -30882976 + MIR SINE MIR 4 242 -20 933 183 43 32 chr5 172203657 172204009 -30881523 + MSTD LTR MaLR 1 396 0 452 262 55 49 chr5 172204143 172204307 -30881225 - MIR3 SINE MIR -6 202 38 295 219 110 0 chr5 172205248 172205321 -30880211 - MIR SINE MIR -107 155 75 222 164 0 0 chr5 172206175 172206230 -30879302 + T-rich Low_complexity Low_complexity 1 55 0 43339 30 18 4 chr5 172206230 172212272 -30873260 - L1PA2 LINE L1 0 6155 1 626 272 33 62 chr5 172212324 172212567 -30872965 - MIR SINE MIR -1 261 26 366 330 26 16 chr5 172213033 172213227 -30872305 + MIR SINE MIR 2 197 -65 683 274 9 37 chr5 172213512 172213727 -30871805 - MER63A DNA MER1_type -1 209 1 644 271 106 5 chr5 172213762 172213804 -30871728 - MIR SINE MIR -24 238 202 368 91 0 202 chr5 172213804 172213903 -30871629 + MADE1 DNA Mariner 2 80 0 644 271 106 5 chr5 172213903 172214067 -30871465 - MIR SINE MIR -60 202 11 328 240 62 10 chr5 172214071 172214167 -30871365 + MIR SINE MIR 162 262 0 306 0 0 0 chr5 172214274 172214308 -30871224 + (CA)n Simple_repeat Simple_repeat 2 35 0 298 379 48 24 chr5 172214358 172214609 -30870923 - L3 LINE CR1 -241 1336 1080 309 51 0 0 chr5 172214767 172214806 -30870726 + (CA)n Simple_repeat Simple_repeat 1 39 0 2366 111 14 51 chr5 172214940 172215290 -30870242 - MER1B DNA MER1_type 0 337 1 492 235 191 22 chr5 172215399 172215582 -30869950 - MIR SINE MIR 0 262 49 547 264 90 25 chr5 172216539 172216740 -30868792 - MIR SINE MIR -18 244 31 2190 99 0 45 chr5 172216902 172217214 -30868318 + AluSx SINE Alu 1 298 -14 328 305 156 0 chr5 172217462 172217590 -30867942 + MIR SINE MIR 87 234 -28 306 253 103 0 chr5 172218410 172218497 -30867035 - MER5A DNA MER1_type -3 186 91 1689 216 59 6 chr5 172218512 172218923 -30866609 - L1MB5 LINE L1 0 6174 5738 253 327 0 20 chr5 172219149 172219250 -30866282 + MIR SINE MIR 135 233 -29 365 331 102 0 chr5 172219579 172219706 -30865826 + L2 LINE L2 3132 3271 -1 575 278 76 21 chr5 172219823 172220114 -30865418 + L1ME4a LINE L1 5592 5898 -223 211 296 0 0 chr5 172221138 172221192 -30864340 - MIR SINE MIR -10 252 199 1848 229 13 83 chr5 172221197 172221239 -30864293 - MLT2B1 LTR ERVL -8 512 469 285 51 0 0 chr5 172221239 172221278 -30864254 + (TG)n Simple_repeat Simple_repeat 1 39 0 1848 229 13 83 chr5 172221278 172221786 -30863746 - MLT2B1 LTR ERVL -51 469 1 282 338 238 0 chr5 172221786 172221946 -30863586 - MIR SINE MIR -60 202 5 438 243 194 48 chr5 172224373 172224399 -30861133 - MLT1I LTR MaLR -63 346 325 7746 48 26 0 chr5 172224399 172225273 -30860259 + MER11D LTR ERVK 1 897 0 438 243 194 48 chr5 172225273 172225514 -30860018 - MLT1I LTR MaLR -84 325 40 343 273 68 0 chr5 172225536 172225624 -30859908 + L2 LINE L2 3215 3308 -5 182 333 17 42 chr5 172226549 172226669 -30858863 + MIR SINE MIR 133 249 -13 294 359 57 6 chr5 172226944 172227103 -30858429 - L1MEc LINE L1 -6013 383 217 2256 201 88 11 chr5 172227103 172227537 -30857995 + MLT2B1 LTR ERVL 11 485 -35 798 109 0 0 chr5 172227537 172227656 -30857876 + (TCCA)n Simple_repeat Simple_repeat 3 121 0 2256 201 88 11 chr5 172227656 172227688 -30857844 + MLT2B1 LTR ERVL 485 513 -7 267 288 131 20 chr5 172227689 172227842 -30857690 - L1MEc LINE L1 -6190 206 37 706 160 0 19 chr5 172228214 172228320 -30857212 - FRAM SINE Alu -14 162 59 187 184 79 0 chr5 172228459 172228497 -30857035 + L3 LINE CR1 1245 1285 -292 537 184 0 10 chr5 172228623 172228726 -30856806 + MER58 DNA MER1_type 2318 2419 -1 214 358 33 42 chr5 172229456 172229576 -30855956 - L2 LINE L2 -186 3086 2968 208 343 114 32 chr5 172229635 172229915 -30855617 - L2 LINE L2 -459 2855 2553 469 83 0 0 chr5 172329916 172329976 -30755556 - THE1A LTR MaLR -295 60 1 1097 224 18 5 chr5 172330790 172331009 -30754523 - MER58A DNA MER1_type 0 224 3 188 283 100 0 chr5 172332032 172332092 -30753440 + L2 LINE L2 3198 3263 -9 723 184 24 65 chr5 172332112 172332316 -30753216 - MLT1E2 LTR MaLR -300 205 5 1738 178 10 10 chr5 172332368 172332672 -30752860 + AluSx SINE Alu 1 304 -8 415 273 214 41 chr5 172332713 172332933 -30752599 + MIR SINE MIR 5 262 0 207 167 0 0 chr5 172332934 172332976 -30752556 + (TA)n Simple_repeat Simple_repeat 1 42 0 12034 134 42 12 chr5 172332976 172334963 -30750569 + Tigger1 DNA MER2_type 1 2048 -370 201 182 0 0 chr5 172335296 172335329 -30750203 + (TTA)n Simple_repeat Simple_repeat 2 34 0 281 329 53 35 chr5 172335396 172335566 -30749966 + MIR SINE MIR 73 245 -17 1637 189 97 42 chr5 172336280 172336755 -30748777 + MLT2B3 LTR ERVL 1 413 -40 220 299 0 0 chr5 172336755 172336822 -30748710 + (TA)n Simple_repeat Simple_repeat 1 67 0 273 163 0 0 chr5 172336822 172336871 -30748661 + (TG)n Simple_repeat Simple_repeat 2 50 0 314 94 75 0 chr5 172336873 172336926 -30748606 + MLT2B3 LTR ERVL 397 453 0 560 236 60 60 chr5 172337047 172337229 -30748303 - MIR SINE MIR -4 258 77 1449 281 111 26 chr5 172337555 172338474 -30747058 - HAL1 LINE L1 -1 2506 1510 236 196 110 61 chr5 172338621 172338784 -30746748 - HAL1 LINE L1 -1240 1267 1097 636 240 97 10 chr5 172338813 172339009 -30746523 + MIR SINE MIR 29 241 -21 38 61 0 0 chr5 172339065 172339131 -30746401 + AT_rich Low_complexity Low_complexity 1 66 0 235 333 45 38 chr5 172339353 172339485 -30746047 + L3 LINE CR1 1120 1252 -325 229 202 202 0 chr5 172339919 172340023 -30745509 + LTR48 LTR ERV1 654 778 -9 781 244 156 35 chr5 172340109 172340531 -30745001 + MLT1K LTR MaLR 1 473 -3 644 322 29 10 chr5 172340925 172341133 -30744399 + MIR SINE MIR 19 230 -32 2252 103 0 7 chr5 172341527 172341827 -30743705 + AluSc SINE Alu 1 298 -11 279 0 0 0 chr5 172341843 172341874 -30743658 + (TG)n Simple_repeat Simple_repeat 2 32 0 276 100 0 0 chr5 172341885 172341925 -30743607 + (TA)n Simple_repeat Simple_repeat 1 40 0 27 0 0 0 chr5 172342019 172342046 -30743486 + AT_rich Low_complexity Low_complexity 1 27 0 773 174 13 7 chr5 172342138 172342293 -30743239 + L1MB8 LINE L1 6022 6177 -1 477 330 122 14 chr5 172342393 172342614 -30742918 - MIR SINE MIR -6 256 12 232 345 24 0 chr5 172343081 172343165 -30742367 - MIR3 SINE MIR -14 194 109 396 372 28 0 chr5 172344149 172344294 -30741238 + MER5B DNA MER1_type 1 149 -29 190 320 20 40 chr5 172345089 172345189 -30740343 - L2 LINE L2 -94 3219 3122 367 353 27 21 chr5 172345327 172345514 -30740018 - L2 LINE L2 -419 2895 2708 716 319 118 28 chr5 172345554 172346011 -30739521 - L2 LINE L2 -2 3311 2814 526 266 9 0 chr5 172346193 172346306 -30739226 - MER81 DNA DNA 0 114 1 2039 227 59 27 chr5 172346506 172347031 -30738501 - MLT1F LTR MaLR 0 542 1 455 285 166 13 chr5 172347539 172347774 -30737758 - L2 LINE L2 -369 2945 2675 678 278 130 25 chr5 172347797 172348121 -30737411 + L2 LINE L2 2956 3313 0 336 358 14 0 chr5 172348495 172348643 -30736889 + MIR SINE MIR 107 256 -6 188 339 61 35 chr5 172349566 172349681 -30735851 - L2 LINE L2 -23 3290 3173 576 319 69 17 chr5 172349743 172349975 -30735557 + MIR SINE MIR 2 245 -17 274 311 126 94 chr5 172349977 172350327 -30735205 - L2 LINE L2 0 3313 2953 536 268 33 13 chr5 172350565 172350718 -30734814 + MER58B DNA MER1_type 186 341 0 187 119 24 71 chr5 172351013 172351055 -30734477 - MIR SINE MIR -139 69 30 207 287 35 70 chr5 172352043 172352157 -30733375 + MIR SINE MIR 12 120 -103 531 180 8 0 chr5 172352194 172352322 -30733210 + L1MA7 LINE L1 6159 6287 -4 606 359 40 55 chr5 172352549 172352897 -30732635 - L2 LINE L2 0 3272 2930 187 313 170 0 chr5 172352908 172353020 -30732512 - L2 LINE L2 0 3313 3183 181 286 14 14 chr5 172353026 172353096 -30732436 + MIR SINE MIR 191 260 -2 32 0 0 0 chr5 172353504 172353536 -30731996 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 172353764 172353787 -30731745 + AT_rich Low_complexity Low_complexity 1 23 0 1901 150 3 0 chr5 172354837 172355124 -30730408 - AluY SINE Alu -23 288 1 1222 200 78 103 chr5 172355282 172355757 -30729775 + MER4C LTR ERV1 1 463 -2 2664 13 0 22 chr5 172355843 172356154 -30729378 - AluY SINE Alu -7 304 1 705 214 71 50 chr5 172356687 172356869 -30728663 + MER5A DNA MER1_type 4 189 0 282 254 184 9 chr5 172357050 172357164 -30728368 - MIR SINE MIR -75 187 54 569 299 55 28 chr5 172357725 172357979 -30727553 - MIR SINE MIR 0 262 2 1243 113 64 198 chr5 172358310 172358683 -30726849 - Tigger7 DNA MER2_type -3 2584 2262 4213 183 23 18 chr5 172358734 172359526 -30726006 - Tigger7 DNA MER2_type -1691 796 1 182 62 31 0 chr5 172360226 172360258 -30725274 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 355 270 34 40 chr5 172360331 172360479 -30725053 + L1MC/D LINE L1 5378 5524 -2284 403 338 58 33 chr5 172360561 172360801 -30724731 + L1MC/D LINE L1 5542 5787 -2021 637 203 163 0 chr5 172360804 172360957 -30724575 - MER58A DNA MER1_type 0 224 47 2916 223 33 2 chr5 172361515 172362148 -30723384 - MER82 DNA MER2_type 0 653 1 26 0 0 0 chr5 172362535 172362561 -30722971 + AT_rich Low_complexity Low_complexity 1 26 0 229 299 10 10 chr5 172362888 172362985 -30722547 + L1MC/D LINE L1 5814 5910 -1898 846 261 110 52 chr5 172362986 172363331 -30722201 + MLT1A1 LTR MaLR 1 365 0 3666 237 44 44 chr5 172363331 172364307 -30721225 + MLT1A1-int LTR MaLR 1 976 -759 2058 206 93 62 chr5 172364315 172364747 -30720785 + MLT1A1-int LTR MaLR 1191 1643 -92 378 0 0 0 chr5 172364747 172364789 -30720743 + (TA)n Simple_repeat Simple_repeat 2 43 0 2058 206 93 62 chr5 172364789 172364885 -30720647 + MLT1A1-int LTR MaLR 1643 1735 0 604 224 139 100 chr5 172364885 172365215 -30720317 + MLT1A1 LTR MaLR 1 343 -22 274 287 37 65 chr5 172365276 172365384 -30720148 + L2 LINE L2 3163 3267 -5 313 353 0 25 chr5 172366988 172367041 -30718491 - MIR SINE MIR -58 150 97 2132 138 44 8 chr5 172367041 172367403 -30718129 - THE1C LTR MaLR 0 375 1 313 353 0 25 chr5 172367403 172367468 -30718064 - MIR SINE MIR -111 97 35 227 224 90 15 chr5 172368756 172368823 -30716709 + L2 LINE L2 3241 3312 -1 191 364 25 25 chr5 172368832 172368950 -30716582 - L3 LINE CR1 -85 1492 1375 10393 28 15 0 chr5 172368950 172370944 -30714588 + L1PA4 LINE L1 4144 6152 -3 289 247 11 0 chr5 172371216 172371305 -30714227 + L1ME LINE L1 5650 5739 -425 2109 259 67 83 chr5 172371306 172372330 -30713202 + L1M3d LINE L1 3 1010 -4881 180 0 0 0 chr5 172372331 172372351 -30713181 + (TA)n Simple_repeat Simple_repeat 1 20 0 286 268 0 0 chr5 172372495 172372592 -30712940 + (TA)n Simple_repeat Simple_repeat 2 98 0 1948 273 67 57 chr5 172372600 172373438 -30712094 + L1M3 LINE L1 1055 1975 -4407 941 229 5 0 chr5 172373554 172373759 -30711773 - MER2 DNA MER2_type -136 209 4 9825 226 61 29 chr5 172373800 172376066 -30709466 + L1M3 LINE L1 2043 4506 -2042 2799 19 0 0 chr5 172376066 172376377 -30709155 + AluYb8 SINE Alu 1 311 -7 9825 226 61 29 chr5 172376377 172377714 -30707818 + L1M3 LINE L1 4506 5798 -750 5669 253 99 32 chr5 172378049 172379893 -30705639 + L1M2a LINE L1 1621 3340 -3827 1684 154 66 0 chr5 172379893 172380166 -30705366 + AluJb SINE Alu 1 291 -21 5669 253 99 32 chr5 172380166 172381941 -30703591 + L1M2a LINE L1 3340 5219 -1948 1339 144 62 0 chr5 172381941 172382198 -30703334 + L1MA3 LINE L1 6032 6304 -1 5669 253 99 32 chr5 172382198 172382359 -30703173 + L1M2a LINE L1 5219 5368 -1799 5208 34 3 0 chr5 172382362 172383006 -30702526 - L1PA3 LINE L1 -786 5360 4715 4616 21 0 0 chr5 172383005 172383538 -30701994 + L1PA3 LINE L1 5361 5893 -262 * 3652 204 28 5 chr5 172383547 172384347 -30701185 + L1M2a LINE L1 5379 6196 -971 270 175 0 0 chr5 172384357 172384414 -30701118 + L1MA10 LINE L1 6271 6327 -7 * 7072 39 13 0 chr5 172384411 172385281 -30700251 - L1PA4 LINE L1 -3 6152 5272 2214 224 61 47 chr5 172385439 172386246 -30699286 + L1M4 LINE L1 3175 3992 -2154 22 56 0 0 chr5 172386668 172386704 -30698828 + AT_rich Low_complexity Low_complexity 1 36 0 239 266 158 7 chr5 172386883 172387022 -30698510 + MIR SINE MIR 103 262 0 389 306 142 42 chr5 172387206 172387664 -30697868 - L2 LINE L2 -6 3307 2804 195 303 76 17 chr5 172388652 172388771 -30696761 + L2 LINE L2 3120 3245 -68 231 265 0 0 chr5 172389141 172389190 -30696342 + GA-rich Low_complexity Low_complexity 5 53 0 344 300 100 0 chr5 172389586 172389716 -30695816 - MIR SINE MIR -118 144 2 252 0 0 0 chr5 172389725 172389753 -30695779 + (A)n Simple_repeat Simple_repeat 1 28 0 315 328 59 43 chr5 172389882 172390138 -30695394 + L2 LINE L2 2718 2977 -337 2228 70 0 3 chr5 172390188 172390511 -30695021 + AluY SINE Alu 1 322 0 412 250 24 32 chr5 172390618 172390742 -30694790 + L2 LINE L2 3159 3281 -32 349 272 11 0 chr5 172391661 172391753 -30693779 - L2 LINE L2 -27 3245 3153 318 299 171 21 chr5 172392036 172392223 -30693309 - MIR SINE MIR -47 215 1 195 302 49 49 chr5 172392287 172392396 -30693136 - MIR SINE MIR -75 133 43 1118 195 55 28 chr5 172393185 172393502 -30692030 + MER33 DNA MER1_type 1 323 -1 184 418 10 0 chr5 172393512 172393610 -30691922 - L3 LINE CR1 -88 1489 1391 197 415 37 0 chr5 172393731 172393866 -30691666 - L3 LINE CR1 -342 1235 1096 1538 179 67 63 chr5 172393963 172394393 -30691139 + MSTB1 LTR MaLR 1 432 0 505 224 105 92 chr5 172394716 172394870 -30690662 + MLT1K LTR MaLR 355 514 -74 225 108 0 0 chr5 172394870 172394907 -30690625 + (CA)n Simple_repeat Simple_repeat 2 38 0 505 224 105 92 chr5 172394907 172394980 -30690552 + MLT1K LTR MaLR 514 585 -3 450 273 38 38 chr5 172395873 172396056 -30689476 - MIR SINE MIR -75 187 5 673 190 66 0 chr5 172396159 172396296 -30689236 + L1M4 LINE L1 5523 5668 -516 913 296 38 22 chr5 172396301 172396615 -30688917 - MLT2F LTR ERVL -325 338 20 971 221 33 9 chr5 172396773 172396986 -30688546 - MER20 DNA MER1_type 0 219 2 289 213 0 0 chr5 172397076 172397123 -30688409 + AluJ/monomer SINE Alu 236 282 -20 245 167 0 0 chr5 172397091 172397127 -30688405 + Alu SINE Alu 85 120 -182 * 1729 166 7 20 chr5 172397523 172397819 -30687713 + AluJo SINE Alu 1 292 -20 3325 154 6 6 chr5 172397974 172398501 -30687031 + MER1A DNA MER1_type 1 527 0 219 192 39 0 chr5 172398827 172398905 -30686627 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 4478 184 62 55 chr5 172399128 172399590 -30685942 + L1MA7 LINE L1 4166 4623 -1668 354 23 0 0 chr5 172399590 172399633 -30685899 + (CA)n Simple_repeat Simple_repeat 1 43 0 4478 184 62 55 chr5 172399633 172401161 -30684371 + L1MA7 LINE L1 4623 6181 -110 374 313 15 10 chr5 172401172 172401303 -30684229 - MIR SINE MIR -77 131 20 2185 54 0 14 chr5 172401872 172402148 -30683384 - AluY SINE Alu -18 293 22 222 281 76 103 chr5 172402431 172402616 -30682916 + L2 LINE L2 2503 2682 -632 383 303 119 55 chr5 172402622 172403001 -30682531 + MLT1J LTR MaLR 1 403 -108 207 176 0 0 chr5 172403011 172403045 -30682487 + CT-rich Low_complexity Low_complexity 1 34 0 1169 133 0 6 chr5 172403147 172403312 -30682220 - AluSp SINE Alu -149 164 1 308 325 0 0 chr5 172404154 172404231 -30681301 + MIR SINE MIR 20 96 -166 2084 115 14 3 chr5 172404434 172404720 -30680812 - AluSq SINE Alu -24 289 1 215 291 87 47 chr5 172404895 172405009 -30680523 - L2 LINE L2 -22 3291 3170 2476 73 0 0 chr5 172405009 172405310 -30680222 - AluY SINE Alu -10 301 1 215 291 87 47 chr5 172405310 172405322 -30680210 - L2 LINE L2 -143 3170 3160 2294 11 0 0 chr5 172405326 172405588 -30679944 - L1PA2 LINE L1 -1 6154 5893 21 0 0 0 chr5 172405996 172406017 -30679515 + AT_rich Low_complexity Low_complexity 1 21 0 251 309 117 43 chr5 172406348 172406510 -30679022 + MIR SINE MIR 1 174 -88 3250 162 11 8 chr5 172409201 172409726 -30675806 - MER1A DNA MER1_type 0 527 1 746 209 166 35 chr5 172409777 172410151 -30675381 - LTR37A LTR ERV1 0 426 4 387 232 101 48 chr5 172411470 172411677 -30673855 + LTR68 LTR ERV1 216 433 -307 716 183 0 51 chr5 172411993 172412168 -30673364 + MER20 DNA MER1_type 54 219 0 372 273 38 76 chr5 172412222 172412460 -30673072 + LTR16A1 LTR ERVL 1 229 -228 1043 281 49 34 chr5 172412566 172413096 -30672436 + Charlie7 DNA MER1_type 180 717 -1895 1620 214 64 25 chr5 172413102 172413583 -30671949 + MLT1D LTR MaLR 6 505 0 367 265 83 0 chr5 172413755 172413887 -30671645 + Charlie8 DNA MER1_type 42 184 -2233 232 329 36 64 chr5 172414269 172414409 -30671123 + MIR3 SINE MIR 19 154 -54 394 329 40 41 chr5 172414700 172415010 -30670522 + L2 LINE L2 2706 3014 -258 1202 173 107 28 chr5 172415377 172415695 -30669837 - MER2 DNA MER2_type -1 344 2 387 289 53 37 chr5 172416072 172416262 -30669270 + MIR SINE MIR 1 193 -69 2040 233 37 49 chr5 172416869 172417626 -30667906 + L1M4 LINE L1 3362 4109 -2037 1948 161 64 0 chr5 172417627 172417988 -30667544 + L1MC1 LINE L1 5931 6314 -19 199 263 23 135 chr5 172418132 172418265 -30667267 + L2 LINE L2 2717 2834 -480 1705 194 91 42 chr5 172418565 172419039 -30666493 - MLT1D LTR MaLR -3 502 6 234 318 45 18 chr5 172419508 172419618 -30665914 + MIR SINE MIR 32 144 -64 465 299 85 6 chr5 172420490 172420654 -30664878 - MIR SINE MIR -27 235 59 1520 201 53 25 chr5 172420656 172421015 -30664517 + MLT1A2 LTR MaLR 1 369 -5 750 117 0 0 chr5 172421814 172421925 -30663607 + AluSg/x SINE Alu 194 304 -5 4277 47 11 0 chr5 172421925 172422474 -30663058 - LTR10C LTR ERV1 -36 555 1 736 261 50 0 chr5 172423240 172423401 -30662131 - MER45A DNA AcHobo 0 178 10 333 226 124 27 chr5 172423399 172423512 -30662020 + MLT1I LTR MaLR 284 549 0 * 320 294 43 74 chr5 172423563 172423794 -30661738 - Charlie8 DNA MER1_type -2152 265 42 1768 149 23 30 chr5 172424079 172424380 -30661152 + AluSx SINE Alu 1 299 -13 213 94 0 0 chr5 172424464 172424496 -30661036 + (CA)n Simple_repeat Simple_repeat 2 33 0 315 267 83 25 chr5 172424574 172424694 -30660838 + MIR SINE MIR 110 236 -26 227 267 128 23 chr5 172424719 172424805 -30660727 + L2 LINE L2 3212 3306 -7 653 252 18 90 chr5 172424966 172425244 -30660288 + MLT1L LTR MaLR 32 289 -326 6375 30 0 6 chr5 172425273 172425998 -30659534 + SVA Other Other 665 1385 -1 249 33 0 0 chr5 172426003 172426033 -30659499 + (A)n Simple_repeat Simple_repeat 1 30 0 306 223 39 19 chr5 172426208 172426311 -30659221 + MLT1L LTR MaLR 509 613 -2 313 202 184 44 chr5 172426717 172426831 -30658701 + L3 LINE CR1 1386 1515 -62 298 374 65 26 chr5 172427176 172427406 -30658126 + MIR SINE MIR 4 242 -20 209 211 0 0 chr5 172427638 172427676 -30657856 + GA-rich Low_complexity Low_complexity 1 38 0 195 307 139 15 chr5 172427689 172427826 -30657706 - MIR SINE MIR -18 244 91 187 238 0 0 chr5 172427915 172427957 -30657575 + L3 LINE CR1 1535 1576 -1 * 227 118 0 0 chr5 172427924 172427958 -30657574 + MIR3 SINE MIR 171 204 -4 397 229 224 29 chr5 172428429 172428599 -30656933 + MIR SINE MIR 8 210 -52 4934 101 1 3 chr5 172428633 172429324 -30656208 + L1PA8A LINE L1 5436 6125 -6 22 35 0 0 chr5 172429812 172429841 -30655691 + AT_rich Low_complexity Low_complexity 1 29 0 10448 77 13 2 chr5 172430115 172432330 -30653202 - L1PA7 LINE L1 -2 6152 3917 879 346 33 22 chr5 172432558 172433050 -30652482 - L2 LINE L2 -314 2999 2504 320 299 55 53 chr5 172433050 172433266 -30652266 + MIR SINE MIR 1 218 -44 543 335 85 20 chr5 172433299 172433592 -30651940 - L2 LINE L2 -876 2438 2127 421 240 70 85 chr5 172434110 172434310 -30651222 + MIR SINE MIR 22 218 -44 231 271 17 0 chr5 172434903 172434962 -30650570 + CT-rich Low_complexity Low_complexity 1 60 0 2558 174 64 96 chr5 172435042 172436014 -30649518 - Charlie1a DNA MER1_type -1 1454 514 2496 112 0 3 chr5 172436014 172436372 -30649160 + THE1B LTR MaLR 1 357 -7 1572 213 46 23 chr5 172436378 172436814 -30648718 - Charlie1a DNA MER1_type -937 518 73 436 298 122 5 chr5 172437145 172437333 -30648199 - MIR SINE MIR -25 237 28 191 290 11 75 chr5 172437411 172437504 -30648028 - L3 LINE CR1 -57 1520 1434 357 294 62 14 chr5 172437805 172437951 -30647581 + L2 LINE L2 2932 3084 -188 4513 164 46 16 chr5 172438010 172438880 -30646652 + MER4D LTR ERV1 1 896 -7 205 380 51 0 chr5 172438894 172438973 -30646559 + L2 LINE L2 3137 3219 -53 186 366 81 8 chr5 172439397 172439520 -30646012 + L2 LINE L2 3137 3268 -4 310 250 82 26 chr5 172439731 172439913 -30645619 - MIR SINE MIR -12 250 21 233 208 233 17 chr5 172440403 172440523 -30645009 + L1ME4a LINE L1 5974 6119 -2 246 299 35 51 chr5 172440556 172440743 -30644789 + MIR SINE MIR 29 212 -50 1605 150 19 61 chr5 172441306 172441619 -30643913 + AluJo SINE Alu 1 300 -12 666 168 28 5 chr5 172441806 172442020 -30643512 - L1MA5 LINE L1 -7 6293 5955 2801 179 63 48 chr5 172442441 172443134 -30642398 - L1MB3 LINE L1 -1 6182 5479 224 353 79 11 chr5 172443525 172443715 -30641817 + L2 LINE L2 2772 2974 -340 187 267 44 0 chr5 172444635 172444680 -30640852 - L3 LINE CR1 -12 1565 1519 1594 182 3 25 chr5 172444928 172445214 -30640318 + AluJo SINE Alu 14 293 -19 1080 254 10 23 chr5 172445416 172445719 -30639813 + AluJo SINE Alu 14 312 0 331 295 145 10 chr5 172446053 172446260 -30639272 - MIR SINE MIR -27 235 1 400 189 67 0 chr5 172447447 172447537 -30637995 - MIR SINE MIR -82 180 85 189 211 26 0 chr5 172447887 172447925 -30637607 + L2 LINE L2 3214 3252 -20 4122 183 30 14 chr5 172448656 172449427 -30636105 + LTR39 LTR ERV1 1 783 0 207 278 124 52 chr5 172449965 172450062 -30635470 + MIR3 SINE MIR 84 187 -21 227 265 106 23 chr5 172450090 172450222 -30635310 - MIR SINE MIR -7 255 113 200 71 0 0 chr5 172450298 172450326 -30635206 + MIR SINE MIR 124 151 -111 311 359 57 0 chr5 172450608 172450714 -30634818 + MIR SINE MIR 2 113 -149 270 281 94 47 chr5 172450839 172450967 -30634565 + MIR SINE MIR 96 229 -33 197 313 0 15 chr5 172451011 172451078 -30634454 + MIR SINE MIR 88 153 -55 1905 171 0 0 chr5 172451093 172451379 -30634153 - AluSx SINE Alu -24 288 3 1072 221 95 0 chr5 172451386 172451648 -30633884 - LTR53 LTR ERVL -11 508 222 473 213 315 14 chr5 172452575 172452791 -30632741 + MLT1C LTR MaLR 187 467 0 261 294 40 56 chr5 172452868 172452994 -30632538 + L2 LINE L2 2945 3068 -204 3848 149 29 33 chr5 172454024 172454754 -30630778 - LTR8A LTR ERV1 0 727 1 379 242 225 0 chr5 172455122 172455242 -30630290 - MER5A DNA MER1_type -1 188 42 344 300 0 0 chr5 172455381 172455481 -30630051 + HsTC2 DNA Tc2 6 105 -1793 1443 231 142 2 chr5 172455540 172456077 -30629455 + HsTC2 DNA Tc2 1282 1893 -5 218 304 38 13 chr5 172456211 172456290 -30629242 - MIR SINE MIR -110 152 72 562 269 122 25 chr5 172457097 172457294 -30628238 - MIR SINE MIR -13 249 34 189 333 144 20 chr5 172458099 172458252 -30627280 - L3 LINE CR1 -390 1187 1016 460 245 180 14 chr5 172458442 172458581 -30626951 - MER5A DNA MER1_type -2 187 26 418 264 27 9 chr5 172458617 172458727 -30626805 + MER5B DNA MER1_type 14 125 -53 228 323 11 21 chr5 172458744 172458837 -30626695 + MIR SINE MIR 168 259 -3 651 163 78 30 chr5 172459011 172459177 -30626355 - L1MC/D LINE L1 -518 5724 5551 22 0 0 0 chr5 172459179 172459201 -30626331 + AT_rich Low_complexity Low_complexity 1 22 0 39639 32 17 1 chr5 172459201 172465228 -30620304 - L1HS LINE L1 0 6155 7 522 194 9 0 chr5 172465231 172465339 -30620193 - L1MC/D LINE L1 -797 5562 5454 188 384 112 33 chr5 172466576 172466818 -30618714 + L2 LINE L2 2977 3237 -35 3799 101 21 2 chr5 172467688 172468250 -30617282 + MER41B LTR ERV1 1 573 -62 2372 81 0 24 chr5 172468251 172468586 -30616946 - L1PA6 LINE L1 -2 6152 5826 799 11 0 0 chr5 172468588 172468683 -30616849 + L1P2 LINE L1 5693 5787 -367 519 91 0 16 chr5 172468683 172468778 -30616754 + MER41A LTR ERV1 467 554 0 241 299 84 9 chr5 172469104 172469211 -30616321 - MIR SINE MIR -67 141 27 311 292 26 9 chr5 172470218 172470331 -30615201 + GA-rich Low_complexity Low_complexity 1 115 0 252 0 0 0 chr5 172471074 172471102 -30614430 + (T)n Simple_repeat Simple_repeat 1 28 0 515 306 32 0 chr5 172471428 172471647 -30613885 - L1ME LINE L1 -372 5790 5565 669 270 56 19 chr5 172471807 172472022 -30613510 + MIR SINE MIR 29 251 -11 392 289 51 32 chr5 172473257 172473413 -30612119 + MIR SINE MIR 104 262 0 387 226 104 0 chr5 172473443 172473558 -30611974 - MIR3 SINE MIR -1 207 81 227 236 42 0 chr5 172473921 172473993 -30611539 + GA-rich Low_complexity Low_complexity 2 76 0 940 152 0 6 chr5 172474495 172474666 -30610866 - L1MA4 LINE L1 -9 6291 6122 23 0 0 0 chr5 172475111 172475134 -30610398 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr5 172475364 172475386 -30610146 + (T)n Simple_repeat Simple_repeat 1 22 0 1195 198 82 72 chr5 172475629 172476034 -30609498 - MLT1C LTR MaLR 0 467 59 234 257 67 0 chr5 172476404 172476509 -30609023 + MLT1K LTR MaLR 454 565 -23 385 317 75 0 chr5 172476541 172476661 -30608871 - L2 LINE L2 -1 3271 3143 526 340 145 29 chr5 172477265 172477756 -30607776 + LTR67 LTR ERVL 4 551 -6 207 0 0 0 chr5 172478592 172478615 -30606917 + (A)n Simple_repeat Simple_repeat 1 23 0 2097 133 0 7 chr5 172480200 172480501 -30605031 + AluSx SINE Alu 1 299 -13 1792 175 3 19 chr5 172480742 172481051 -30604481 + AluSx SINE Alu 1 304 -8 244 271 0 0 chr5 172481223 172481282 -30604250 + G-rich Low_complexity Low_complexity 2 60 0 247 269 72 47 chr5 172481359 172481638 -30603894 + L1MDa LINE L1 1541 1826 -4714 825 265 126 75 chr5 172481894 172482066 -30603466 + L1MC4 LINE L1 7098 7260 -782 1483 204 87 23 chr5 172482066 172482459 -30603073 + LTR52 LTR ERVL 1 418 -3 825 265 126 75 chr5 172482459 172483185 -30602347 + L1MC4 LINE L1 7260 8042 0 625 248 174 46 chr5 172483407 172483839 -30601693 + L1MDa LINE L1 3172 3658 -2882 272 332 13 75 chr5 172486317 172486543 -30598989 + LTR67 LTR ERVL 15 226 -331 467 296 20 25 chr5 172486546 172486749 -30598783 + LTR67 LTR ERVL 348 549 -8 2739 160 15 93 chr5 172486820 172487484 -30598048 + LTR9 LTR ERV1 1 612 0 205 301 14 14 chr5 172487838 172487911 -30597621 + MER5A DNA MER1_type 8 80 -109 346 192 0 77 chr5 172487963 172488041 -30597491 - THE1C-int LTR MaLR -816 764 693 2730 105 93 95 chr5 172488042 172488622 -30596910 - THE1C-int LTR MaLR -1001 579 1 1874 115 61 61 chr5 172488622 172488997 -30596535 - THE1C LTR MaLR 0 375 1 1782 162 7 0 chr5 172489430 172489708 -30595824 + AluJo SINE Alu 1 280 -32 375 23 0 0 chr5 172489709 172489753 -30595779 + (CA)n Simple_repeat Simple_repeat 1 44 0 780 270 181 26 chr5 172490077 172490459 -30595073 - MLT1D LTR MaLR -1 504 64 1496 216 85 0 chr5 172490494 172490823 -30594709 + MLT1A1 LTR MaLR 5 361 -4 305 174 0 72 chr5 172490822 172490891 -30594641 - MLT1D LTR MaLR -440 65 2 * 189 107 0 0 chr5 172491996 172492024 -30593508 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 190 263 18 97 chr5 172492632 172492746 -30592786 + MIR3 SINE MIR 58 162 -46 393 303 19 65 chr5 172492753 172492908 -30592624 + MIR SINE MIR 5 152 -110 209 361 0 0 chr5 172493162 172493234 -30592298 + MER5B DNA MER1_type 9 80 -98 563 216 128 0 chr5 172494777 172494925 -30590607 - MER5A DNA MER1_type -7 182 16 500 284 107 12 chr5 172495079 172495248 -30590284 + MER5A DNA MER1_type 4 188 -1 222 118 0 0 chr5 172495626 172495660 -30589872 + (TA)n Simple_repeat Simple_repeat 1 34 0 183 42 0 0 chr5 172495667 172495691 -30589841 + (TG)n Simple_repeat Simple_repeat 2 25 0 850 228 10 5 chr5 172495694 172495896 -30589636 - MLT2D LTR ERVL -211 203 1 202 232 0 73 chr5 172495902 172495984 -30589548 + L2 LINE L2 3142 3217 -96 353 281 35 9 chr5 172495990 172496104 -30589428 + L2 LINE L2 3192 3308 -5 395 273 108 5 chr5 172496688 172496882 -30588650 + L1ME LINE L1 5559 5772 -349 389 302 24 0 chr5 172497336 172497462 -30588070 + MER94 DNA DNA 1 129 -5 1718 180 7 0 chr5 172498243 172498527 -30587005 - AluJb SINE Alu -26 286 1 10767 201 92 42 chr5 172499460 172502194 -30583338 + L1M2 LINE L1 3 2875 -3974 1806 241 33 18 chr5 172502193 172502745 -30582787 + L1M2 LINE L1 2832 3391 -3457 * 10239 43 2 1 chr5 172502886 172504207 -30581325 - L1P LINE L1 -1420 4726 3404 7075 146 66 15 chr5 172504205 172506138 -30579394 + L1P LINE L1 2347 4511 -1635 * 521 169 4 39 chr5 172506123 172506267 -30579265 + L1 LINE L1 5180 5318 -838 * 10609 153 20 3 chr5 172506295 172508155 -30577377 + L1PA15-16 LINE L1 891 2782 -4067 234 327 39 32 chr5 172508308 172508464 -30577068 + MER5B DNA MER1_type 15 171 -7 847 304 103 50 chr5 172509066 172509760 -30575772 - L2 LINE L2 -1 3312 2584 433 302 95 34 chr5 172509997 172510012 -30575520 - MIR3 SINE MIR -1 207 194 1603 152 82 12 chr5 172510012 172510341 -30575191 - L1MA9 LINE L1 0 6312 5961 433 302 95 34 chr5 172510341 172510504 -30575028 - MIR3 SINE MIR -14 194 18 394 244 38 69 chr5 172511277 172511408 -30574124 + L2 LINE L2 3136 3262 -10 477 314 145 6 chr5 172511448 172511607 -30573925 + MER5A DNA MER1_type 9 189 0 393 306 29 10 chr5 172511607 172511762 -30573770 - MIR3 SINE MIR -47 161 3 436 312 83 32 chr5 172512173 172512426 -30573106 + MLT1I LTR MaLR 5 270 -139 492 264 61 7 chr5 172512697 172512845 -30572687 + MIR SINE MIR 92 247 -15 362 337 40 20 chr5 172513441 172513643 -30571889 - MIR SINE MIR -37 225 20 638 262 18 6 chr5 172515727 172515891 -30569641 + MIR SINE MIR 91 256 -6 24 0 0 0 chr5 172515915 172515939 -30569593 + AT_rich Low_complexity Low_complexity 1 24 0 333 235 49 0 chr5 172515939 172516020 -30569512 + MSTD LTR MaLR 1 85 -343 1236 77 0 0 chr5 172516020 172516176 -30569356 + AluSc SINE Alu 144 299 -10 1200 228 52 55 chr5 172516176 172516505 -30569027 + MSTD LTR MaLR 68 395 -1 275 294 7 63 chr5 172516578 172516721 -30568811 + L2 LINE L2 3171 3305 -8 657 291 122 6 chr5 172517061 172517415 -30568117 + L1ME4a LINE L1 5502 5896 -225 207 139 0 0 chr5 172517436 172517472 -30568060 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 343 342 127 6 chr5 172519049 172519207 -30566325 + MIR SINE MIR 11 187 -75 2054 110 3 10 chr5 172519230 172519521 -30566011 + AluSg SINE Alu 1 289 -21 927 307 117 30 chr5 172519762 172519968 -30565564 + LTR16C LTR ERVL 17 204 -287 1016 171 16 11 chr5 172519968 172520155 -30565377 - MER5A DNA MER1_type -1 188 1 927 307 117 30 chr5 172520155 172520197 -30565335 + LTR16C LTR ERVL 204 241 -250 1867 163 30 67 chr5 172520197 172520601 -30564931 - MLT1B LTR MaLR -1 389 1 927 307 117 30 chr5 172520601 172520788 -30564744 + LTR16C LTR ERVL 241 491 0 245 280 30 30 chr5 172521020 172521120 -30564412 - LTR67 LTR ERVL 0 557 458 342 0 0 0 chr5 172521887 172521925 -30563607 + (CA)n Simple_repeat Simple_repeat 2 39 0 1452 227 0 10 chr5 172522125 172522420 -30563112 - AluJo SINE Alu -20 292 1 272 272 37 12 chr5 172522716 172522797 -30562735 + MIR3 SINE MIR 78 160 -48 189 107 0 0 chr5 172523556 172523584 -30561948 + (TC)n Simple_repeat Simple_repeat 1 28 0 390 289 91 83 chr5 172523734 172523987 -30561545 + L1MEc LINE L1 35 289 -6107 186 43 0 0 chr5 172524006 172524029 -30561503 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 5252 83 8 4 chr5 172524030 172524750 -30560782 - L1PB1 LINE L1 -43 6108 5386 731 290 65 56 chr5 172524773 172525128 -30560404 + L1MEc LINE L1 278 635 -5761 2254 96 0 0 chr5 172525155 172525464 -30560068 - AluSc SINE Alu 0 309 1 7618 190 91 29 chr5 172525464 172525549 -30559983 - L1MA9 LINE L1 -60 6252 6174 183 100 0 0 chr5 172525549 172525579 -30559953 + (TG)n Simple_repeat Simple_repeat 2 31 0 7618 190 91 29 chr5 172525579 172526437 -30559095 - L1MA9 LINE L1 -138 6174 5371 198 0 0 0 chr5 172526437 172526459 -30559073 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 7618 190 91 29 chr5 172526459 172527259 -30558273 - L1MA9 LINE L1 -941 5371 4623 1712 181 3 14 chr5 172527259 172527604 -30557928 + AluSx SINE Alu 1 342 0 7618 190 91 29 chr5 172527604 172528711 -30556821 - L1MA9 LINE L1 -1689 4623 3222 2433 192 44 9 chr5 172528710 172529381 -30556151 + L1P3 LINE L1 4792 5475 -691 * 8321 42 5 1 chr5 172529670 172530746 -30554786 - L1PA4 LINE L1 -2718 3428 2349 16191 40 2 0 chr5 172530746 172533483 -30552049 + L1PA4 LINE L1 3404 6145 -10 245 319 26 17 chr5 172533496 172533612 -30551920 + LTR16A1 LTR ERVL 74 190 -267 295 248 59 20 chr5 172533698 172533799 -30551733 + LTR16A1 LTR ERVL 353 457 0 314 232 39 21 chr5 172533799 172533917 -30551615 + L1P3 LINE L1 5668 5786 -335 670 281 135 64 chr5 172534657 172535190 -30550342 + MLT1G1 LTR MaLR 8 578 -17 21 57 0 0 chr5 172535514 172535549 -30549983 + AT_rich Low_complexity Low_complexity 1 35 0 259 372 155 12 chr5 172536048 172536306 -30549226 + L3 LINE CR1 1192 1486 -91 324 299 7 69 chr5 172536329 172536473 -30549059 + L2 LINE L2 3138 3272 0 22 35 0 0 chr5 172536775 172536804 -30548728 + AT_rich Low_complexity Low_complexity 1 29 0 899 223 57 9 chr5 172536994 172537205 -30548327 - MER58A DNA MER1_type -3 221 1 284 363 15 15 chr5 172537258 172537422 -30548110 - MIR SINE MIR -59 203 40 2156 120 45 25 chr5 172537666 172538023 -30547509 - THE1B LTR MaLR 0 364 1 859 331 51 49 chr5 172538095 172538585 -30546947 - MLT1K LTR MaLR -71 517 27 450 257 22 15 chr5 172539158 172539294 -30546238 + MLT1J LTR MaLR 373 509 -2 2012 66 26 0 chr5 172541027 172541300 -30544232 + L1PA7 LINE L1 5874 6153 -1 976 243 47 0 chr5 172541713 172541948 -30543584 + MIR SINE MIR 11 256 -6 1903 204 85 65 chr5 172541966 172542509 -30543023 + MLT2B3 LTR ERVL 1 554 0 252 309 65 0 chr5 172542766 172542889 -30542643 - L1MC/D LINE L1 -1988 5820 5690 1936 154 27 62 chr5 172542922 172543324 -30542208 + MLT1B LTR MaLR 3 390 0 237 199 28 23 chr5 172543360 172543452 -30542080 - L1MC/D LINE L1 -541 5580 5492 1944 145 10 0 chr5 172543562 172543884 -30541648 - AluSx SINE Alu 0 325 1 406 390 11 11 chr5 172545435 172545617 -30539915 + MIR3 SINE MIR 20 201 -7 386 319 103 0 chr5 172545730 172545915 -30539617 + MIR SINE MIR 59 262 0 240 271 12 35 chr5 172546594 172546679 -30538853 + L3 LINE CR1 1114 1196 -381 280 294 11 11 chr5 172546691 172546783 -30538749 - MIR SINE MIR 0 262 171 270 247 82 0 chr5 172546912 172546985 -30538547 + L3 LINE CR1 1196 1274 -303 726 378 6 0 chr5 172547908 172548220 -30537312 + L3 LINE CR1 517 830 -747 870 284 32 77 chr5 172548387 172548869 -30536663 + L2 LINE L2 2550 3008 -264 2471 123 8 3 chr5 172548978 172549352 -30536180 + L1PA11 LINE L1 5799 6174 0 332 287 16 33 chr5 172549354 172549476 -30536056 + L2 LINE L2 3193 3312 -1 346 343 97 61 chr5 172550626 172551259 -30534273 - L2 LINE L2 -5 3267 2560 1052 196 25 0 chr5 172551458 172551657 -30533875 - MER20 DNA MER1_type -14 205 2 380 359 143 5 chr5 172551765 172551982 -30533550 + MIR SINE MIR 15 261 -1 2074 134 0 28 chr5 172552235 172552556 -30532976 + AluSx SINE Alu 1 312 0 199 216 0 0 chr5 172553198 172553235 -30532297 + L2 LINE L2 3268 3304 -9 235 299 47 3 chr5 172553238 172553320 -30532212 + MIR SINE MIR 63 148 -60 180 216 98 0 chr5 172553553 172553604 -30531928 + MIR3 SINE MIR 151 206 -2 * 274 228 38 25 chr5 172553602 172553681 -30531851 + L3b LINE CR1 1302 1381 -202 240 371 81 0 chr5 172554211 172554335 -30531197 + MLT1I LTR MaLR 9 142 -267 782 107 69 8 chr5 172554470 172554601 -30530931 + MER30 DNA MER1_type 2 140 -90 720 88 59 7 chr5 172554601 172554737 -30530795 - L1PA2 LINE L1 -4 6151 6009 1909 23 0 0 chr5 172554848 172555065 -30530467 - L1PA3 LINE L1 -28 6127 5911 537 88 0 0 chr5 172555065 172555133 -30530399 + MER30 DNA MER1_type 127 194 -36 1687 256 72 30 chr5 172555193 172555752 -30529780 + MLT1E LTR MaLR 4 589 -4 306 50 0 0 chr5 172556549 172556589 -30528943 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 1234 220 32 0 chr5 172556589 172556839 -30528693 - AluSq SINE Alu -55 258 1 323 268 134 61 chr5 172557196 172557427 -30528105 + MLT1K LTR MaLR 322 569 -19 346 280 32 41 chr5 172558202 172558420 -30527112 + HAL1 LINE L1 2272 2487 -20 291 54 0 0 chr5 172558431 172558468 -30527064 + (CA)n Simple_repeat Simple_repeat 2 38 0 534 316 93 13 chr5 172558542 172558767 -30526765 - MIR SINE MIR -18 244 2 334 271 159 32 chr5 172559744 172560021 -30525511 + L2 LINE L2 2814 3125 -188 1665 222 41 22 chr5 172560253 172560712 -30524820 + MER110A LTR ERV1 1 468 0 389 304 89 0 chr5 172560737 172560849 -30524683 + MIR3 SINE MIR 70 191 -17 21 36 0 0 chr5 172561700 172561728 -30523804 + AT_rich Low_complexity Low_complexity 1 28 0 494 339 91 5 chr5 172562679 172562900 -30522632 + MIR SINE MIR 11 250 -12 206 258 113 0 chr5 172562952 172563014 -30522518 + MIR SINE MIR 24 92 -116 253 238 16 16 chr5 172563323 172563386 -30522146 - L2 LINE L2 0 3313 3251 249 325 32 8 chr5 172563611 172563734 -30521798 - L2 LINE L2 -340 2973 2848 315 140 35 18 chr5 172563775 172563832 -30521700 - L2 LINE L2 0 3313 3256 31 0 0 0 chr5 172563895 172563926 -30521606 + AT_rich Low_complexity Low_complexity 1 31 0 270 276 243 0 chr5 172563938 172564119 -30521413 - L2 LINE L2 -1087 2227 2003 25914 144 15 22 chr5 172564120 172566617 -30518915 + L1PA8 LINE L1 3 2517 -3970 2165 98 20 14 chr5 172566617 172566914 -30518618 + AluSx SINE Alu 3 301 -11 25914 144 15 22 chr5 172566914 172570882 -30514650 + L1PA8 LINE L1 2517 6487 0 413 291 16 8 chr5 172571659 172571786 -30513746 - Charlie8 DNA MER1_type -2152 265 138 195 226 226 11 chr5 172571933 172572026 -30513506 - L2 LINE L2 -1070 2244 2132 245 319 29 0 chr5 172572081 172572150 -30513382 - Charlie8 DNA MER1_type -2346 71 1 350 21 0 21 chr5 172572151 172572199 -30513333 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 330 326 40 76 chr5 172572354 172572578 -30512954 - MIR SINE MIR -32 230 15 567 301 92 34 chr5 172573709 172573948 -30511584 - MIR SINE MIR 0 262 10 486 170 30 20 chr5 172574019 172574119 -30511413 + MER5A DNA MER1_type 12 112 -77 26 30 0 0 chr5 172574933 172574966 -30510566 + AT_rich Low_complexity Low_complexity 1 33 0 2339 212 114 50 chr5 172574966 172575908 -30509624 - L1MC5 LINE L1 -42 7919 6918 249 205 0 0 chr5 172575897 172575936 -30509596 - L1MC4 LINE L1 -1055 6987 6949 * 202 71 24 24 chr5 172575936 172575978 -30509554 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5476 126 22 22 chr5 172576019 172577044 -30508488 - L1PA15 LINE L1 0 6165 5128 3841 52 2 0 chr5 172577176 172577656 -30507876 - L1PA5 LINE L1 -1686 4460 3980 7399 48 0 0 chr5 172577656 172579334 -30506198 + L1PA5 LINE L1 4464 6141 -13 323 291 83 52 chr5 172579349 172579571 -30505961 - L1M4 LINE L1 -2751 3395 3181 1480 143 0 0 chr5 172579571 172579801 -30505731 - L1PA14 LINE L1 0 6161 5932 323 291 83 52 chr5 172579801 172580465 -30505067 - L1M4 LINE L1 -2965 3181 2481 23 0 0 0 chr5 172580565 172580588 -30504944 + AT_rich Low_complexity Low_complexity 1 23 0 291 93 0 0 chr5 172580948 172580991 -30504541 + (TG)n Simple_repeat Simple_repeat 2 44 0 618 248 117 18 chr5 172581404 172581626 -30503906 - MIR SINE MIR -2 260 17 491 272 0 25 chr5 172582073 172582235 -30503297 - Charlie8 DNA MER1_type -2189 228 71 456 304 36 101 chr5 172582383 172582659 -30502873 - L2 LINE L2 -20 3252 2995 2222 110 7 0 chr5 172582739 172583083 -30502449 - AluSx SINE Alu 0 346 1 280 331 124 16 chr5 172583096 172583217 -30502315 - MIR SINE MIR -105 157 24 713 266 97 22 chr5 172583249 172583475 -30502057 - MIR SINE MIR -11 251 9 575 313 50 0 chr5 172585044 172585242 -30500290 - MIR SINE MIR 0 262 55 606 244 18 74 chr5 172585242 172585471 -30500061 - L2 LINE L2 -1 3312 3097 1851 143 54 43 chr5 172585538 172585908 -30499624 + THE1C LTR MaLR 2 375 0 262 322 35 35 chr5 172585954 172586125 -30499407 - LTR16C LTR ERVL -13 478 308 242 319 104 28 chr5 172586165 172586309 -30499223 - LTR16C LTR ERVL -236 255 101 347 276 31 55 chr5 172586451 172586614 -30498918 - LTR50 LTR ERVL -636 159 1 754 269 127 8 chr5 172586614 172586882 -30498650 - L2 LINE L2 -995 2319 2020 605 296 153 13 chr5 172586882 172587183 -30498349 - L2 LINE L2 -2168 1146 804 2497 214 30 52 chr5 172588534 172589132 -30496400 - MER77 LTR ERV1 -20 585 1 644 291 70 29 chr5 172589313 172589557 -30495975 + MIR SINE MIR 8 261 -1 1865 169 0 3 chr5 172590087 172590389 -30495143 + AluJb SINE Alu 4 304 -8 337 226 96 68 chr5 172590597 172590743 -30494789 - Charlie7 DNA MER1_type -276 2336 2187 1044 205 0 5 chr5 172591232 172591422 -30494110 + MER5A DNA MER1_type 1 189 0 404 262 16 0 chr5 172591430 172591556 -30493976 - Charlie7 DNA MER1_type -1866 746 619 203 105 0 53 chr5 172591572 172591610 -30493922 + MER5B DNA MER1_type 137 172 -6 325 214 125 62 chr5 172591906 172592018 -30493514 + MER103 DNA DNA 32 150 -16 763 203 96 0 chr5 172592277 172592454 -30493078 + MER105 DNA DNA 11 204 0 281 306 50 0 chr5 172592602 172592723 -30492809 + LTR67 LTR ERVL 410 536 -21 22 0 0 0 chr5 172593392 172593414 -30492118 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 172594436 172594458 -30491074 + AT_rich Low_complexity Low_complexity 1 22 0 13886 186 53 2 chr5 172594458 172594805 -30490727 - L1PB1 LINE L1 0 6867 6539 351 0 0 0 chr5 172594805 172594844 -30490688 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 13886 186 53 2 chr5 172594844 172598458 -30487074 - L1PB1 LINE L1 -328 6539 2716 279 0 0 0 chr5 172598458 172598489 -30487043 + (TTG)n Simple_repeat Simple_repeat 3 33 0 13886 186 53 2 chr5 172598489 172598683 -30486849 - L1PB1 LINE L1 -4151 2716 2533 2305 215 55 20 chr5 172598696 172598884 -30486648 - L1 LINE L1 -2452 4654 4474 198 0 0 0 chr5 172598884 172598906 -30486626 + (TGG)n Simple_repeat Simple_repeat 1 22 0 2305 215 55 20 chr5 172598906 172599414 -30486118 - L1 LINE L1 -2632 4474 3934 2012 98 29 0 chr5 172599422 172599733 -30485799 - AluSg1 SINE Alu 0 319 1 479 99 0 0 chr5 172599777 172599848 -30485684 - L1MA5A LINE L1 -5 6292 6222 189 0 0 0 chr5 172599888 172599909 -30485623 + (TAA)n Simple_repeat Simple_repeat 1 21 0 190 0 67 0 chr5 172600005 172600035 -30485497 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 301 267 30 0 chr5 172600145 172600246 -30485286 - L1 LINE L1 -3280 3826 3723 348 189 0 0 chr5 172600259 172600333 -30485199 + (CA)n Simple_repeat Simple_repeat 2 75 0 911 209 14 58 chr5 172600336 172600569 -30484963 - L1 LINE L1 -3705 3401 3180 2679 33 0 0 chr5 172600569 172600875 -30484657 - AluY SINE Alu -5 306 1 911 209 14 58 chr5 172600875 172600918 -30484614 - L1 LINE L1 -3926 3180 3137 2652 246 68 39 chr5 172601024 172601174 -30484358 - L1 LINE L1 -4171 2936 2792 1616 172 35 41 chr5 172601174 172601464 -30484068 - AluJb SINE Alu -22 290 3 2652 246 68 39 chr5 172601464 172601933 -30483599 - L1 LINE L1 -4315 2792 2338 2335 160 35 21 chr5 172601933 172602359 -30483173 - MSTB1 LTR MaLR 0 432 1 2652 246 68 39 chr5 172602359 172602555 -30482977 - L1 LINE L1 -4769 2338 2149 2398 80 0 0 chr5 172602555 172602857 -30482675 + AluY SINE Alu 1 302 -9 2652 246 68 39 chr5 172602857 172604092 -30481440 - L1 LINE L1 -4958 2149 1 568 262 105 5 chr5 172604339 172604530 -30481002 + MER63A DNA MER1_type 1 210 0 206 197 113 28 chr5 172604985 172605056 -30480476 + MIR3 SINE MIR 115 191 -17 211 292 0 28 chr5 172605713 172605785 -30479747 + MIR3 SINE MIR 133 202 -6 481 307 74 0 chr5 172606077 172606253 -30479279 - MIR SINE MIR -61 201 13 312 339 121 29 chr5 172606737 172606911 -30478621 - MIR SINE MIR -60 202 13 347 206 33 76 chr5 172607451 172607543 -30477989 - MIR SINE MIR -59 203 116 626 280 43 0 chr5 172609439 172609625 -30475907 - MIR SINE MIR -2 260 67 21 0 0 0 chr5 172609858 172609879 -30475653 + AT_rich Low_complexity Low_complexity 1 21 0 304 352 141 9 chr5 172609892 172610105 -30475427 - L2 LINE L2 -37 3235 2995 * 390 337 72 30 chr5 172610097 172610361 -30475171 - L2 LINE L2 -837 2477 2203 207 0 0 0 chr5 172610428 172610451 -30475081 + (CA)n Simple_repeat Simple_repeat 2 24 0 326 311 29 24 chr5 172610548 172610757 -30474775 - L2 LINE L2 -1155 2159 1950 689 213 18 0 chr5 172610803 172610972 -30474560 + L1ME3A LINE L1 5767 5938 -232 213 282 8 17 chr5 172611123 172611240 -30474292 + A-rich Low_complexity Low_complexity 2 117 0 * 231 203 14 27 chr5 172611168 172611242 -30474290 + (TAA)n Simple_repeat Simple_repeat 2 74 0 2352 257 88 24 chr5 172611407 172612846 -30472686 + L1ME3A LINE L1 4625 6157 -13 326 302 60 9 chr5 172613059 172613175 -30472357 - L2 LINE L2 0 3313 3192 297 0 0 0 chr5 172613969 172614002 -30471530 + (GA)n Simple_repeat Simple_repeat 2 34 0 254 307 30 50 chr5 172614016 172614117 -30471415 - MIR SINE MIR -93 115 17 891 327 21 6 chr5 172614155 172614488 -30471044 - LTR16A LTR ERVL 0 450 113 2322 86 7 0 chr5 172616167 172616471 -30469061 + AluSx SINE Alu 5 310 -2 275 298 72 7 chr5 172616882 172617172 -30468360 - L1MDb LINE L1 -5043 1341 1029 2793 230 49 16 chr5 172617226 172617934 -30467598 + MER44D DNA MER2_type 2 605 0 804 303 29 4 chr5 172618628 172618869 -30466663 + MIR SINE MIR 2 248 -14 383 295 54 0 chr5 172619234 172619346 -30466186 - MIR3 SINE MIR -38 170 53 1663 175 9 32 chr5 172619575 172619912 -30465620 + AluJo SINE Alu 1 312 0 254 150 0 0 chr5 172620158 172620198 -30465334 + L1PA16 LINE L1 6118 6157 -9 2059 105 0 3 chr5 172620613 172620899 -30464633 - AluSx SINE Alu -27 285 1 564 194 55 18 chr5 172621534 172621699 -30463833 - L1MB8 LINE L1 -9 6169 5999 219 304 78 29 chr5 172622795 172622897 -30462635 + MIR SINE MIR 156 262 0 191 274 39 0 chr5 172623307 172623358 -30462174 + MIR SINE MIR 93 145 -63 356 291 37 26 chr5 172623884 172624076 -30461456 + MIR SINE MIR 15 212 -50 306 73 0 0 chr5 172624216 172624257 -30461275 + (CA)n Simple_repeat Simple_repeat 1 41 0 1295 107 28 0 chr5 172624847 172625024 -30460508 + AluSp SINE Alu 120 301 -12 264 311 22 44 chr5 172626269 172626359 -30459173 + MIR3 SINE MIR 81 168 -40 26 30 0 0 chr5 172626478 172626511 -30459021 + AT_rich Low_complexity Low_complexity 1 33 0 2262 136 0 0 chr5 172626517 172626825 -30458707 + AluSx SINE Alu 1 308 -4 180 0 0 0 chr5 172626825 172626845 -30458687 + (TA)n Simple_repeat Simple_repeat 2 21 0 312 274 42 11 chr5 172626913 172627008 -30458524 - L2 LINE L2 0 3272 3175 343 332 27 50 chr5 172628278 172628498 -30457034 + MIR SINE MIR 18 232 -30 26 0 0 0 chr5 172628967 172628993 -30456539 + AT_rich Low_complexity Low_complexity 1 26 0 285 75 0 0 chr5 172629142 172629182 -30456350 + (CA)n Simple_repeat Simple_repeat 1 40 0 963 193 11 6 chr5 172629213 172629394 -30456138 + MER5A DNA MER1_type 2 183 -6 234 245 59 45 chr5 172629454 172629543 -30455989 + MIR SINE MIR 61 149 -65 681 284 130 22 chr5 172629582 172629997 -30455535 + LTR16B LTR ERVL 5 464 0 320 349 146 10 chr5 172630491 172630683 -30454849 + MIR SINE MIR 45 262 0 207 0 0 0 chr5 172631093 172631116 -30454416 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1964 133 39 0 chr5 172631119 172631398 -30454134 - AluSg SINE Alu -19 291 2 2006 165 11 6 chr5 172631553 172631904 -30453628 - THE1A LTR MaLR -2 353 1 27408 128 12 62 chr5 172632273 172632685 -30452847 + L1PA7 LINE L1 1 432 -5722 455 0 18 0 chr5 172632685 172632740 -30452792 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 27408 128 12 62 chr5 172632740 172638664 -30446868 + L1PA7 LINE L1 432 6008 -146 771 183 0 0 chr5 172638767 172638887 -30446645 + AluSg/x SINE Alu 138 257 -55 242 306 0 9 chr5 172638952 172639063 -30446469 + L1ME LINE L1 5775 5884 -237 2173 113 3 7 chr5 172639129 172639429 -30446103 - AluSp SINE Alu -6 307 9 599 159 19 0 chr5 172639444 172639551 -30445981 - L1PA10 LINE L1 -5 6163 6055 273 356 75 6 chr5 172639671 172639831 -30445701 + MIR3 SINE MIR 36 206 -2 27 62 0 0 chr5 172640135 172640183 -30445349 + AT_rich Low_complexity Low_complexity 1 48 0 30759 38 2 3 chr5 172640183 172644922 -30440610 - L1PA3 LINE L1 -3 6152 1422 6437 73 25 55 chr5 172645127 172647373 -30438159 - SVA Other Other -520 1386 1 21 0 0 0 chr5 172647429 172647450 -30438082 + AT_rich Low_complexity Low_complexity 1 21 0 619 301 11 6 chr5 172648081 172648257 -30437275 + MER5A DNA MER1_type 7 183 -6 537 243 118 24 chr5 172648825 172648994 -30436538 + MIR3 SINE MIR 13 197 -11 264 59 0 0 chr5 172649526 172649560 -30435972 + (A)n Simple_repeat Simple_repeat 1 34 0 180 307 18 97 chr5 172649851 172649965 -30435567 + MIR SINE MIR 26 130 -78 41168 46 5 1 chr5 172649975 172656105 -30429427 - L1PA3 LINE L1 -3 6152 2 2161 164 53 11 chr5 172656179 172656806 -30428726 + MER39 LTR ERV1 1 707 0 1167 185 36 39 chr5 172656815 172657129 -30428403 - MER31A LTR ERV1 -30 436 114 412 283 23 98 chr5 172657235 172657500 -30428032 - L1ME3A LINE L1 0 6170 5926 1071 222 83 39 chr5 172657563 172657923 -30427609 - L1MB8 LINE L1 -19 6159 5784 413 162 0 0 chr5 172657923 172657991 -30427541 + Tigger1 DNA MER2_type 1 68 -2350 4307 242 79 17 chr5 172657991 172659149 -30426383 - L1M4b LINE L1 -5619 1240 11 398 267 28 18 chr5 172659167 172659382 -30426150 - L1ME3A LINE L1 -204 5958 5742 342 147 0 0 chr5 172659990 172660058 -30425474 + (GA)n Simple_repeat Simple_repeat 1 68 0 1624 300 73 24 chr5 172660302 172662310 -30423222 - L1ME3A LINE L1 -540 5630 3520 1062 238 84 6 chr5 172662384 172662695 -30422837 - MER46C DNA MER2_type 0 338 4 277 258 81 8 chr5 172663763 172663887 -30421645 + L1ME LINE L1 5530 5662 -459 313 303 229 20 chr5 172663921 172664165 -30421367 - L2 LINE L2 -5 3308 3014 1360 315 130 11 chr5 172664303 172664914 -30420618 + L2 LINE L2 2316 2992 -321 2460 93 54 84 chr5 172664964 172665405 -30420127 - LTR12 LTR ERV1 -234 480 53 248 231 0 0 chr5 172665405 172665457 -30420075 - LTR30 LTR ERV1 -670 52 1 476 239 72 43 chr5 172665514 172665652 -30419880 + L2 LINE L2 3172 3313 0 282 281 22 22 chr5 172666000 172666089 -30419443 + L3 LINE CR1 877 965 -612 605 304 95 49 chr5 172666468 172666794 -30418738 + L3 LINE CR1 1230 1570 -7 2127 112 44 0 chr5 172666945 172667240 -30418292 - AluSx SINE Alu -4 308 1 926 229 104 17 chr5 172667338 172667635 -30417897 - MER2 DNA MER2_type -22 323 1 201 74 0 0 chr5 172668351 172668378 -30417154 + (TG)n Simple_repeat Simple_repeat 2 28 0 771 258 79 17 chr5 172668451 172668691 -30416841 + MIR SINE MIR 8 262 0 250 224 0 0 chr5 172668700 172668758 -30416774 + MIR SINE MIR 72 129 -79 22 0 0 0 chr5 172668918 172668940 -30416592 + AT_rich Low_complexity Low_complexity 1 22 0 447 325 108 52 chr5 172669892 172670041 -30415491 - L3 LINE CR1 -24 1553 1385 2183 122 3 3 chr5 172670041 172670344 -30415188 - AluSc SINE Alu -6 303 1 447 325 108 52 chr5 172670344 172670425 -30415107 - L3 LINE CR1 -192 1385 1310 414 94 0 0 chr5 172670937 172671001 -30414531 + (TG)n Simple_repeat Simple_repeat 2 65 0 24 77 0 0 chr5 172671642 172671694 -30413838 + AT_rich Low_complexity Low_complexity 1 52 0 274 37 0 93 chr5 172671750 172671804 -30413728 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 207 218 26 58 chr5 172671940 172672096 -30413436 + (TATATG)n Simple_repeat Simple_repeat 3 153 0 264 245 233 12 chr5 172673248 172673355 -30412177 + MIR SINE MIR 30 150 -63 675 261 118 53 chr5 172673428 172673549 -30411983 + LTR16C LTR ERVL 89 201 -290 2049 116 4 4 chr5 172673549 172673826 -30411706 - AluSq SINE Alu -36 277 1 675 261 118 53 chr5 172673826 172674061 -30411471 + LTR16C LTR ERVL 201 468 -23 420 288 59 17 chr5 172674127 172674245 -30411287 + L2 LINE L2 3150 3272 0 39597 43 26 1 chr5 172674860 172680863 -30404669 + L1PA2 LINE L1 1 6152 -3 188 35 35 0 chr5 172680879 172680908 -30404624 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 2132 113 0 0 chr5 172681116 172681400 -30404132 - AluSx SINE Alu -27 285 2 384 285 46 15 chr5 172681403 172681533 -30403999 - MIR SINE MIR -59 149 16 191 260 78 39 chr5 172681947 172682024 -30403508 + L2 LINE L2 3193 3272 0 205 226 20 49 chr5 172682204 172682306 -30403226 + (TTCA)n Simple_repeat Simple_repeat 3 101 0 19870 115 8 18 chr5 172682650 172683445 -30402087 - L1PA7 LINE L1 -1 6153 5351 2369 90 13 0 chr5 172683445 172683744 -30401788 - AluSp SINE Alu -10 303 1 19870 115 8 18 chr5 172683744 172687195 -30398337 - L1PA7 LINE L1 -803 5351 1944 8803 144 19 32 chr5 172687494 172689817 -30395715 - L1P3 LINE L1 -3456 3005 717 414 151 0 0 chr5 172692092 172692165 -30393367 + (CA)n Simple_repeat Simple_repeat 2 74 0 283 213 7 136 chr5 172692192 172692347 -30393185 + L1ME4a LINE L1 5689 5823 -298 316 153 12 82 chr5 172692648 172692733 -30392799 + L1ME4a LINE L1 6017 6095 -26 198 42 62 42 chr5 172692741 172692789 -30392743 + T-rich Low_complexity Low_complexity 2 50 0 185 222 0 19 chr5 172693019 172693073 -30392459 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 417 241 35 21 chr5 172693475 172693620 -30391912 - LTR33 LTR ERVL -10 511 365 705 238 95 39 chr5 172693623 172694109 -30391423 - MER69 DNA AcHobo -2 2524 2010 * 938 238 156 71 chr5 172694107 172694489 -30391043 - MER69 DNA AcHobo -1958 568 133 1872 239 96 28 chr5 172694489 172695071 -30390461 - MLT1E2 LTR MaLR -4 622 1 938 238 156 71 chr5 172695071 172695183 -30390349 - MER69 DNA AcHobo -2393 133 32 611 280 80 12 chr5 172695271 172695521 -30390011 - LTR33 LTR ERVL -254 267 1 335 356 71 46 chr5 172695756 172696304 -30389228 + L2 LINE L2 2298 2859 -455 687 222 69 0 chr5 172696401 172696545 -30388987 + MER63A DNA MER1_type 57 210 0 486 317 49 11 chr5 172697155 172697338 -30388194 + MIR SINE MIR 32 221 -41 838 206 0 38 chr5 172698336 172698520 -30387012 + MER5B DNA MER1_type 1 177 -1 863 209 166 74 chr5 172698642 172699034 -30386498 + MLT1F1 LTR MaLR 67 494 -73 230 232 0 43 chr5 172699040 172699109 -30386423 + GA-rich Low_complexity Low_complexity 2 67 0 404 366 77 0 chr5 172699350 172699544 -30385988 - MIR SINE MIR -6 256 48 21 0 0 0 chr5 172699606 172699627 -30385905 + AT_rich Low_complexity Low_complexity 1 21 0 383 292 67 8 chr5 172699666 172699786 -30385746 - MIR3 SINE MIR -21 187 61 808 285 63 39 chr5 172699879 172700289 -30385243 - L2 LINE L2 0 3313 2894 273 250 13 26 chr5 172700287 172700363 -30385169 + MIR SINE MIR 70 144 -64 * 291 216 0 0 chr5 172700379 172700430 -30385102 + L2 LINE L2 3220 3270 -2 422 266 203 37 chr5 172701050 172701321 -30384211 - L2 LINE L2 -3 3310 2995 717 211 13 7 chr5 172701511 172701663 -30383869 - MER20 DNA MER1_type -1 218 66 625 182 10 131 chr5 172701827 172701955 -30383577 + MER69A DNA AcHobo 4 101 -2425 2274 102 23 0 chr5 172701955 172702259 -30383273 - AluSp SINE Alu -2 311 1 625 182 10 131 chr5 172702259 172702328 -30383204 + MER69A DNA AcHobo 101 177 0 219 298 84 61 chr5 172702516 172702647 -30382885 + L2 LINE L2 3179 3312 -1 938 220 11 0 chr5 172702679 172702865 -30382667 + MER5A DNA MER1_type 1 188 -1 376 326 31 62 chr5 172702885 172703078 -30382454 - MIR SINE MIR -56 206 20 183 337 12 12 chr5 172704242 172704328 -30381204 + MER5B DNA MER1_type 63 148 -30 857 158 37 56 chr5 172704396 172704740 -30380792 + MER96B DNA MER1_type? 10 402 -15 695 226 35 4 chr5 172706102 172706328 -30379204 - Charlie4a DNA MER1_type -9 499 267 756 213 102 0 chr5 172706436 172706652 -30378880 - Charlie4a DNA MER1_type -246 262 25 565 222 57 17 chr5 172706838 172707014 -30378518 + L1ME LINE L1 5519 5701 -420 689 353 57 22 chr5 172707387 172707893 -30377639 - L2 LINE L2 -35 3278 2752 293 272 112 73 chr5 172707981 172708344 -30377188 + MLT1H LTR MaLR 114 549 0 580 340 20 10 chr5 172708351 172708554 -30376978 - L2 LINE L2 -556 2758 2554 425 348 59 30 chr5 172708591 172708861 -30376671 - L3 LINE CR1 -125 1452 1175 219 317 77 10 chr5 172708935 172709039 -30376493 + L2 LINE L2 3161 3271 -1 244 122 0 41 chr5 172709040 172709089 -30376443 - L3 LINE CR1 -318 1259 1213 330 245 20 10 chr5 172710329 172710427 -30375105 + GA-rich Low_complexity Low_complexity 2 100 0 311 256 76 98 chr5 172710644 172710821 -30374711 - MIR SINE MIR -56 206 23 188 310 40 20 chr5 172711044 172711144 -30374388 - L2 LINE L2 -249 3023 2922 435 297 83 16 chr5 172711179 172711371 -30374161 + L2 LINE L2 2514 2718 -596 299 359 7 14 chr5 172711390 172711532 -30374000 + L2 LINE L2 2845 2985 -328 376 264 38 0 chr5 172711592 172711698 -30373834 + MIR SINE MIR 7 116 -146 286 430 9 9 chr5 172711936 172712050 -30373482 + L2 LINE L2 3136 3249 -23 3308 202 48 25 chr5 172713433 172714340 -30371192 + MER63C DNA MER1_type 3 930 0 350 341 60 0 chr5 172714456 172714673 -30370859 + LTR16A LTR ERVL 145 374 -76 272 247 14 14 chr5 172715146 172715219 -30370313 - L2 LINE L2 -213 3059 2987 217 217 203 0 chr5 172715719 172715788 -30369744 + L2 LINE L2 3227 3309 -4 313 294 163 0 chr5 172716042 172716195 -30369337 + MIR SINE MIR 75 252 -10 319 269 77 48 chr5 172716365 172716469 -30369063 + MIR3 SINE MIR 4 110 -98 * 685 277 130 72 chr5 172716457 172716969 -30368563 - L2 LINE L2 -3 3310 2755 542 299 86 14 chr5 172717214 172717435 -30368097 + MIR SINE MIR 16 252 -10 281 231 149 43 chr5 172718642 172718765 -30366767 + L1MC5 LINE L1 7629 7738 -223 2428 116 34 3 chr5 172718765 172719118 -30366414 - THE1B LTR MaLR 0 364 1 281 231 149 43 chr5 172719118 172719249 -30366283 + L1MC5 LINE L1 7738 7910 -51 794 347 106 19 chr5 172719649 172720376 -30365156 + L3 LINE CR1 622 1411 -166 818 146 62 31 chr5 172720438 172720518 -30365014 + MER33 DNA MER1_type 26 102 -2483 1418 233 77 29 chr5 172720518 172720896 -30364636 + MSTD LTR MaLR 1 396 0 818 146 62 31 chr5 172720896 172721007 -30364525 + MER33 DNA MER1_type 102 223 -101 952 161 0 62 chr5 172721007 172721199 -30364333 + AluJo SINE Alu 86 265 -47 333 0 0 0 chr5 172721215 172721252 -30364280 + (TG)n Simple_repeat Simple_repeat 2 38 0 234 121 69 0 chr5 172721265 172721323 -30364209 + (TA)n Simple_repeat Simple_repeat 2 63 0 386 164 62 39 chr5 172721338 172721466 -30364066 + MER33 DNA MER1_type 194 324 0 502 271 66 6 chr5 172721559 172721725 -30363807 + MIR3 SINE MIR 30 205 -3 231 328 120 8 chr5 172721981 172722106 -30363426 - MIR SINE MIR -5 257 119 774 266 36 40 chr5 172722606 172722858 -30362674 - MIR SINE MIR 0 262 12 453 103 0 0 chr5 172722868 172722936 -30362596 + (TGGA)n Simple_repeat Simple_repeat 4 71 0 233 315 133 39 chr5 172724270 172724473 -30361059 + L2 LINE L2 2836 3057 -215 225 351 71 26 chr5 172724566 172724720 -30360812 + L2 LINE L2 3107 3267 -5 208 130 43 0 chr5 172724766 172724812 -30360720 + GA-rich Low_complexity Low_complexity 2 49 0 419 278 15 116 chr5 172724977 172725175 -30360357 - MER5A DNA MER1_type 0 189 12 200 357 107 0 chr5 172725789 172725929 -30359603 + L2 LINE L2 1932 2086 -1228 304 271 12 90 chr5 172726211 172726377 -30359155 + MIR SINE MIR 106 258 -4 180 176 0 0 chr5 172726407 172726441 -30359091 + (CAT)n Simple_repeat Simple_repeat 2 35 0 817 179 92 49 chr5 172726547 172726934 -30358598 + LTR53 LTR ERVL 1 508 -11 297 0 0 0 chr5 172727702 172727735 -30357797 + (TG)n Simple_repeat Simple_repeat 1 33 0 2622 23 0 10 chr5 172728266 172728570 -30356962 - AluYa5 SINE Alu -10 301 1 303 308 27 39 chr5 172729038 172729302 -30356230 - LTR16C LTR ERVL 0 491 181 236 335 113 81 chr5 172729447 172729761 -30355771 - L3 LINE CR1 -4 1573 1238 2464 213 63 4 chr5 172729761 172730272 -30355260 + MLT1F LTR MaLR 1 541 -1 236 335 113 81 chr5 172730272 172730416 -30355116 - L3 LINE CR1 -339 1238 1100 337 249 70 75 chr5 172730425 172730638 -30354894 - MLT1K LTR MaLR 0 588 377 626 331 31 23 chr5 172731450 172731707 -30353825 + MIR SINE MIR 1 259 -3 42173 38 1 2 chr5 172732000 172738145 -30347387 + L1PA4 LINE L1 13 6152 -3 22 0 0 0 chr5 172738556 172738578 -30346954 + AT_rich Low_complexity Low_complexity 1 22 0 280 306 129 0 chr5 172738745 172738869 -30346663 - MER117 DNA MER1_type -49 148 9 2216 172 76 24 chr5 172739107 172739244 -30346288 - L1MB7 LINE L1 -21 6163 6027 1774 244 62 4 chr5 172739244 172740187 -30345345 - L1MD3 LINE L1 -743 5403 4999 370 161 32 65 chr5 172740181 172740305 -30345227 - L1M4c LINE L1 -4240 2406 2287 * 2069 208 49 64 chr5 172740342 172740787 -30344745 - L1M4c LINE L1 -5053 1489 1039 1853 156 3 45 chr5 172740787 172741101 -30344431 + AluJb SINE Alu 3 303 -9 2069 208 49 64 chr5 172741101 172742026 -30343506 - L1M4c LINE L1 -5503 1039 2 732 342 57 50 chr5 172742081 172742610 -30342922 + L2 LINE L2 2770 3311 -2 315 281 31 31 chr5 172742831 172742927 -30342605 + MIR3 SINE MIR 85 180 -28 1123 187 9 14 chr5 172744024 172744243 -30341289 - MER20 DNA MER1_type 0 219 2 277 250 0 0 chr5 172744441 172744501 -30341031 - MIR SINE MIR -43 219 160 582 286 100 43 chr5 172744613 172744844 -30340688 + MIR SINE MIR 1 244 -18 2219 114 30 0 chr5 172745001 172745298 -30340234 - AluSg SINE Alu -4 306 1 225 382 39 0 chr5 172745367 172745469 -30340063 - MIR SINE MIR -61 147 42 342 0 0 0 chr5 172746065 172746103 -30339429 + (CA)n Simple_repeat Simple_repeat 2 39 0 678 279 91 69 chr5 172746442 172746894 -30338638 + MLT1J LTR MaLR 1 462 -49 2220 113 7 3 chr5 172746938 172747248 -30338284 + AluSq SINE Alu 1 311 -2 191 32 65 0 chr5 172747253 172747284 -30338248 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 267 319 0 0 chr5 172747679 172747748 -30337784 - L3 LINE CR1 -948 629 561 303 28 0 0 chr5 172747828 172747864 -30337668 + (CA)n Simple_repeat Simple_repeat 1 36 0 1031 216 9 22 chr5 172747942 172748169 -30337363 + MER58A DNA MER1_type 1 224 0 548 217 71 96 chr5 172748178 172748418 -30337114 - MER106A DNA MER1_type -1 235 2 928 214 18 40 chr5 172748427 172748651 -30336881 - MER20 DNA MER1_type 0 219 1 189 0 0 0 chr5 172749100 172749121 -30336411 + (A)n Simple_repeat Simple_repeat 1 21 0 312 327 0 47 chr5 172750077 172750184 -30335348 + MIR SINE MIR 30 131 -77 420 291 150 12 chr5 172750230 172750484 -30335048 - MLT1K LTR MaLR -116 472 184 226 306 35 69 chr5 172751225 172751369 -30334163 + MIR SINE MIR 83 221 -41 4436 198 63 19 chr5 172752004 172752657 -30332875 + Tigger6a DNA MER2_type 1 717 -880 1966 132 54 0 chr5 172752657 172752953 -30332579 + AluSx SINE Alu 1 312 0 4436 198 63 19 chr5 172752953 172753334 -30332198 + Tigger6a DNA MER2_type 717 1080 -3 22 80 0 0 chr5 172753657 172753707 -30331825 + AT_rich Low_complexity Low_complexity 1 50 0 1186 196 9 22 chr5 172754218 172754442 -30331090 + MER58A DNA MER1_type 4 224 0 373 324 0 0 chr5 172756188 172756293 -30329239 + MIR3 SINE MIR 81 185 -23 277 294 37 72 chr5 172756478 172756635 -30328897 - MIR SINE MIR -70 138 28 265 300 62 0 chr5 172757344 172757424 -30328108 + MER5A DNA MER1_type 105 189 0 1338 175 30 10 chr5 172758927 172759230 -30326302 + L1MD3 LINE L1 6801 7109 -886 323 242 11 22 chr5 172759235 172759326 -30326206 + MLT1F1 LTR MaLR 33 122 -445 1147 195 29 107 chr5 172759326 172759737 -30325795 + L1MD3 LINE L1 7402 7780 -215 9921 181 8 4 chr5 172759861 172762967 -30322565 + L1PB1 LINE L1 3001 6119 -32 1165 175 42 23 chr5 172763118 172763381 -30322151 + MER4E LTR ERV1 501 768 -11 465 19 0 0 chr5 172764059 172764113 -30321419 + (TG)n Simple_repeat Simple_repeat 2 55 0 237 159 0 0 chr5 172764538 172764582 -30320950 + GA-rich Low_complexity Low_complexity 2 45 0 219 246 0 0 chr5 172765890 172765947 -30319585 + (CA)n Simple_repeat Simple_repeat 2 58 0 214 283 184 46 chr5 172766157 172766309 -30319223 - MIR SINE MIR -89 173 1 272 267 180 6 chr5 172766345 172766506 -30319026 - L1ME LINE L1 -391 5730 5542 523 394 62 27 chr5 172766733 172767025 -30318507 - L2 LINE L2 0 3272 2971 2339 64 0 3 chr5 172767066 172767377 -30318155 - AluY SINE Alu 0 310 1 538 246 180 62 chr5 172767820 172768064 -30317468 - MLT1H LTR MaLR -127 422 150 1287 211 0 0 chr5 172768182 172768414 -30317118 - AluSx SINE Alu -80 232 1 1965 139 17 0 chr5 172768551 172768846 -30316686 + AluSx SINE Alu 1 300 -12 275 283 65 60 chr5 172768866 172769050 -30316482 + L2 LINE L2 3128 3312 -1 407 125 0 0 chr5 172769069 172769125 -30316407 + AluJ/FLAM SINE Alu 3 58 -254 218 146 0 0 chr5 172769536 172769577 -30315955 + (T)n Simple_repeat Simple_repeat 1 41 0 237 231 19 0 chr5 172770150 172770202 -30315330 + GA-rich Low_complexity Low_complexity 3 55 0 296 24 0 24 chr5 172770245 172770287 -30315245 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1438 193 7 7 chr5 172770441 172770721 -30314811 + AluJb SINE Alu 5 284 -28 2613 59 0 0 chr5 172771302 172771605 -30313927 + AluY SINE Alu 1 303 -8 15510 106 8 14 chr5 172771984 172772624 -30312908 - L1PA7 LINE L1 -165 5989 5347 2358 83 13 7 chr5 172772624 172772924 -30312608 - AluSp SINE Alu -11 302 1 15510 106 8 14 chr5 172772924 172775141 -30310391 - L1PA7 LINE L1 -807 5347 3143 24371 37 10 0 chr5 172775329 172778895 -30306637 + L1PA2 LINE L1 2576 6152 -3 188 35 35 0 chr5 172778911 172778940 -30306592 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 2096 120 0 0 chr5 172779148 172779432 -30306100 - AluSx SINE Alu -27 285 2 383 285 46 15 chr5 172779435 172779565 -30305967 - MIR SINE MIR -59 149 16 185 260 78 39 chr5 172779979 172780056 -30305476 + L2 LINE L2 3193 3272 0 204 295 9 18 chr5 172780210 172780322 -30305210 + (TTTA)n Simple_repeat Simple_repeat 1 111 0 * 212 256 11 22 chr5 172780241 172780331 -30305201 + (TTCA)n Simple_repeat Simple_repeat 1 89 0 3980 96 8 46 chr5 172780736 172781390 -30304142 - L1PA7 LINE L1 0 6154 5526 394 277 9 9 chr5 172782067 172782179 -30303353 - MLT1A2 LTR MaLR -90 284 173 216 264 0 0 chr5 172782179 172782232 -30303300 + GA-rich Low_complexity Low_complexity 2 54 0 771 139 44 44 chr5 172782250 172782408 -30303124 - MLT1A2 LTR MaLR -216 158 1 1726 194 3 11 chr5 172782587 172782938 -30302594 - L1 LINE L1 -3475 2671 2324 34524 108 10 9 chr5 172782948 172788953 -30296579 + L1PA4 LINE L1 11 6154 -1 426 287 69 38 chr5 172790531 172790848 -30294684 + L1M4 LINE L1 3730 4056 -2090 2189 105 13 3 chr5 172791339 172791643 -30293889 - AluSg SINE Alu -3 307 1 1551 183 9 43 chr5 172791647 172791970 -30293562 - AluJo SINE Alu 0 312 1 1917 149 16 7 chr5 172792036 172792345 -30293187 - AluSx SINE Alu 0 312 1 199 311 98 0 chr5 172792402 172792524 -30293008 + L2 LINE L2 3035 3168 -145 1478 188 30 10 chr5 172792683 172792986 -30292546 + AluJo SINE Alu 1 309 -3 5812 155 40 21 chr5 172792986 172793781 -30291751 - MER4-int LTR ERV1 -1478 5120 4293 1534 157 45 11 chr5 172793781 172794067 -30291465 + AluSx SINE Alu 1 296 -16 5812 155 40 21 chr5 172794067 172794398 -30291134 - MER4-int LTR ERV1 -2305 4293 3970 759 172 156 5 chr5 172795099 172795285 -30290247 - L1MB3 LINE L1 -14 6169 5956 23 0 0 0 chr5 172795899 172795922 -30289610 + AT_rich Low_complexity Low_complexity 1 23 0 273 183 46 150 chr5 172796005 172796158 -30289374 + MER104 DNA Tc2 5 141 -39 7671 48 3 30 chr5 172796158 172797739 -30287793 + SVA Other Other 4 1383 -3 213 91 0 152 chr5 172797746 172797767 -30287765 + (A)n Simple_repeat Simple_repeat 1 24 -32 3737 50 9 0 chr5 172797767 172798203 -30287329 + SVA Other Other 944 1383 -3 213 91 0 152 chr5 172798203 172798231 -30287301 + (A)n Simple_repeat Simple_repeat 24 40 -16 3465 65 9 16 chr5 172798231 172798674 -30286858 + SVA Other Other 944 1383 -3 213 91 0 152 chr5 172798674 172798689 -30286843 + (A)n Simple_repeat Simple_repeat 40 56 0 207 0 0 0 chr5 172798847 172798870 -30286662 + (A)n Simple_repeat Simple_repeat 1 23 0 799 186 11 57 chr5 172798905 172799082 -30286450 - LTR26 LTR ERV1 -1 602 434 216 0 0 0 chr5 172799084 172799108 -30286424 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 739 148 0 0 chr5 172799110 172799211 -30286321 - AluSg/x SINE Alu -33 279 179 245 188 0 94 chr5 172799311 172799396 -30286136 + LTR5 LTR ERVK 730 806 -163 207 0 0 0 chr5 172799581 172799604 -30285928 + (A)n Simple_repeat Simple_repeat 1 23 0 3162 164 14 108 chr5 172799639 172799818 -30285714 - LTR26 LTR ERV1 -1 602 408 216 0 0 0 chr5 172799818 172799842 -30285690 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1713 115 50 57 chr5 172799844 172800123 -30285409 - AluSg SINE Alu -33 277 1 3162 164 14 108 chr5 172800123 172800605 -30284927 - LTR26 LTR ERV1 -196 407 1 2442 69 3 0 chr5 172801010 172801313 -30284219 - AluY SINE Alu -7 304 1 206 298 36 24 chr5 172801414 172801498 -30284034 + MIR SINE MIR 38 122 -140 889 259 0 30 chr5 172802150 172802413 -30283119 + AluJo SINE Alu 1 255 -57 3221 165 18 14 chr5 172802413 172802932 -30282600 - LTR26 LTR ERV1 0 603 80 1926 181 77 48 chr5 172802932 172803347 -30282185 + MSTA LTR MaLR 2 428 0 3221 165 18 14 chr5 172803347 172803379 -30282153 - LTR26 LTR ERV1 -523 80 50 1583 220 94 13 chr5 172803379 172803752 -30281780 + MSTB LTR MaLR 1 403 -23 1872 135 138 39 chr5 172803752 172804166 -30281366 - MER4A LTR ERV1 0 664 122 2168 121 3 0 chr5 172804166 172804463 -30281069 - AluSp SINE Alu -15 298 1 1872 135 138 39 chr5 172804463 172804599 -30280933 - MER4A LTR ERV1 -542 122 1 8379 124 42 44 chr5 172804604 172806244 -30279288 - MER4A-int LTR ERV1 -1 6597 4475 247 343 109 15 chr5 172806837 172807209 -30278323 + L2 LINE L2 2611 3024 -248 670 308 16 0 chr5 172807449 172807631 -30277901 + MIR SINE MIR 41 225 -37 217 349 35 0 chr5 172807744 172807830 -30277702 + MIR3 SINE MIR 101 189 -19 318 322 33 0 chr5 172807913 172808003 -30277529 - MIR SINE MIR -71 137 45 287 263 212 0 chr5 172808119 172808218 -30277314 - MIR3 SINE MIR -3 205 86 220 276 35 0 chr5 172808517 172808575 -30276957 - L2 LINE L2 -39 3274 3215 227 279 90 41 chr5 172809049 172809171 -30276361 - MIR3 SINE MIR -79 129 2 580 203 9 19 chr5 172809527 172809757 -30275775 + MLT1H1 LTR MaLR 296 555 0 262 286 16 0 chr5 172809763 172809826 -30275706 + L2 LINE L2 3244 3307 -6 312 262 231 45 chr5 172809854 172810075 -30275457 - MIR SINE MIR 0 262 1 193 309 55 36 chr5 172810599 172810654 -30274878 - L2 LINE L2 -21 3251 3196 389 353 43 46 chr5 172810783 172811086 -30274446 + L2 LINE L2 2554 2855 -459 207 279 108 54 chr5 172811288 172811417 -30274115 - MIR3 SINE MIR -6 202 67 317 232 36 129 chr5 172811645 172811827 -30273705 + L1ME LINE L1 5348 5507 -659 5036 70 23 0 chr5 172811827 172812446 -30273086 - L1PA6 LINE L1 0 6154 5522 317 232 36 129 chr5 172812446 172812487 -30273045 + L1ME LINE L1 5507 5550 -616 724 87 26 9 chr5 172812593 172812708 -30272824 - AluY SINE Alu -76 235 119 221 284 27 14 chr5 172812807 172812881 -30272651 + MIR SINE MIR 47 121 -141 2124 107 4 0 chr5 172813225 172813506 -30272026 + AluSg SINE Alu 1 282 -28 207 88 0 0 chr5 172813506 172813540 -30271992 + (CA)n Simple_repeat Simple_repeat 2 35 0 2095 115 10 0 chr5 172813941 172814236 -30271296 + AluSq SINE Alu 1 298 -15 1530 219 60 31 chr5 172814527 172814986 -30270546 + MER41B LTR ERV1 109 486 0 267 65 87 0 chr5 172815305 172815351 -30270181 + L1MB4 LINE L1 6130 6179 -1 1108 134 10 40 chr5 172816059 172816261 -30269271 + MSTC LTR MaLR 1 196 -232 1233 207 33 4 chr5 172816626 172816897 -30268635 + L1MD3 LINE L1 7717 7995 0 219 246 0 0 chr5 172817512 172817569 -30267963 + (CA)n Simple_repeat Simple_repeat 2 58 0 214 283 184 46 chr5 172817779 172817931 -30267601 - MIR SINE MIR -89 173 1 272 267 180 6 chr5 172817967 172818128 -30267404 - L1ME LINE L1 -391 5730 5542 228 365 47 7 chr5 172818355 172818503 -30267029 - L2 LINE L2 0 3313 3160 2677 26 0 3 chr5 172818694 172818999 -30266533 - AluY SINE Alu -7 304 1 1283 94 86 39 chr5 172819545 172819779 -30265753 - L1P4 LINE L1 -393 5770 5526 2022 124 0 7 chr5 172820079 172820384 -30265148 + AluSg SINE Alu 2 304 0 379 266 46 28 chr5 172820798 172820907 -30264625 - MLT1A2 LTR MaLR -90 284 174 198 209 0 0 chr5 172820908 172820951 -30264581 + GA-rich Low_complexity Low_complexity 2 44 0 658 176 61 34 chr5 172820985 172821133 -30264399 - MLT1A2 LTR MaLR -222 152 1 222 37 0 0 chr5 172821265 172821292 -30264240 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 2218 176 19 24 chr5 172821318 172821739 -30263793 - LTR57-int LTR ERVL -3512 1831 1413 189 0 0 0 chr5 172821915 172821936 -30263596 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1371 184 75 18 chr5 172821981 172822259 -30263273 + L1PA16 LINE L1 5859 6152 -14 216 0 0 0 chr5 172823368 172823392 -30262140 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 279 269 0 0 chr5 172823828 172823895 -30261637 - L1M4 LINE L1 -1840 4306 4240 3758 162 25 31 chr5 172824049 172824851 -30260681 + MER4-int LTR ERV1 4313 5109 -1489 1738 194 3 0 chr5 172824859 172825163 -30260369 - AluJo SINE Alu -7 305 1 184 306 71 60 chr5 172825180 172825363 -30260169 - L2 LINE L2 -1 3312 3128 1965 139 17 0 chr5 172825383 172825678 -30259854 - AluSx SINE Alu -12 300 1 1489 186 10 23 chr5 172825854 172826160 -30259372 + AluSx SINE Alu 11 312 0 655 222 0 22 chr5 172826227 172826362 -30259170 + FLAM_C SINE Alu 1 132 -1 1009 177 79 129 chr5 172826368 172826685 -30258847 + AluJb SINE Alu 2 302 0 1785 178 3 34 chr5 172826869 172827164 -30258368 - MER1B DNA MER1_type -2373 339 55 2407 86 122 0 chr5 172827164 172827500 -30258032 - MER51B LTR ERV1 0 377 1 1785 178 3 34 chr5 172827500 172827553 -30257979 - MER1B DNA MER1_type -2657 55 2 30 59 0 0 chr5 172828364 172828415 -30257117 + AT_rich Low_complexity Low_complexity 1 51 0 1773 125 32 0 chr5 172828567 172828846 -30256686 - L1PA13 LINE L1 -3 6160 5873 1859 148 3 40 chr5 172829575 172829899 -30255633 - AluSx SINE Alu 0 312 1 2186 114 0 3 chr5 172829909 172830206 -30255326 - AluSg SINE Alu -7 303 8 1329 154 202 4 chr5 172832007 172832260 -30253272 + AluSx SINE Alu 2 304 -8 615 326 36 10 chr5 172832386 172832687 -30252845 + L2 LINE L2 1785 2093 -1221 2149 205 14 70 chr5 172832871 172833388 -30252144 - LTR64 LTR ERVK -70 488 1 773 208 30 6 chr5 172833388 172833556 -30251976 + MER3 DNA MER1_type 34 205 -4 23 62 0 0 chr5 172834054 172834086 -30251446 + AT_rich Low_complexity Low_complexity 1 32 0 470 255 102 32 chr5 172834401 172834728 -30250804 - L1 LINE L1 -3336 2810 2450 334 174 3 31 chr5 172834891 172834977 -30250555 - MER4C LTR ERV1 0 610 383 1610 149 57 19 chr5 172835157 172835473 -30250059 - MER4A LTR ERV1 -336 328 1 22 35 0 0 chr5 172835662 172835691 -30249841 + AT_rich Low_complexity Low_complexity 1 29 0 791 249 6 0 chr5 172835730 172835899 -30249633 + MER58B DNA MER1_type 172 341 0 1389 120 5 0 chr5 172836128 172836319 -30249213 + AluSg/x SINE Alu 108 299 -13 392 297 24 36 chr5 172836356 172836521 -30249011 + LTR33 LTR ERVL 3 165 -356 767 181 9 159 chr5 172836604 172836729 -30248803 + AluJo SINE Alu 11 87 -225 2155 100 28 3 chr5 172836729 172837018 -30248514 + AluSq SINE Alu 1 296 -17 767 181 9 159 chr5 172837018 172837124 -30248408 + AluJo SINE Alu 87 207 -105 1015 153 21 168 chr5 172837621 172837954 -30247578 + MLT1A2 LTR MaLR 1 284 -90 4092 136 11 0 chr5 172838624 172839249 -30246283 + L1PA13 LINE L1 5526 6157 -6 29 60 0 0 chr5 172839407 172839457 -30246075 + AT_rich Low_complexity Low_complexity 1 50 0 316 217 0 0 chr5 172840668 172840728 -30244804 + MER75 DNA T2_type 1 60 -454 1978 149 3 10 chr5 172840747 172841055 -30244477 - AluSq SINE Alu -5 308 3 183 389 0 0 chr5 172842030 172842102 -30243430 + L2 LINE L2 3194 3265 -7 220 323 62 23 chr5 172842448 172842578 -30242954 - MIR SINE MIR -119 143 9 1848 164 0 43 chr5 172842595 172842918 -30242614 - AluJb SINE Alu -3 309 1 1956 131 28 0 chr5 172843182 172843473 -30242059 - AluSq SINE Alu -14 299 1 1727 97 4 50 chr5 172843939 172844197 -30241335 + AluSc SINE Alu 1 246 -63 643 189 92 51 chr5 172844321 172844517 -30241015 + AluJb SINE Alu 93 296 -16 1355 173 69 28 chr5 172844563 172844852 -30240680 + L1PA16 LINE L1 5859 6159 -7 2194 103 7 0 chr5 172846065 172846367 -30239165 + AluSq SINE Alu 1 304 -9 2261 271 37 36 chr5 172846687 172847203 -30238329 - L1M4 LINE L1 -1842 4304 3785 2373 69 0 23 chr5 172847203 172847506 -30238026 - AluY SINE Alu -15 296 1 2261 271 37 36 chr5 172847506 172847820 -30237712 - L1M4 LINE L1 -2361 3785 3473 277 217 33 0 chr5 172847931 172847991 -30237541 + AluS SINE Alu 11 72 -231 2029 104 17 0 chr5 172848168 172848455 -30237077 + AluSx SINE Alu 1 292 -20 1660 164 119 18 chr5 172848800 172849211 -30236321 - MER61D LTR ERV1 0 501 1 2113 77 22 0 chr5 172849707 172850001 -30235531 + AluSc SINE Alu 1 300 0 624 265 41 6 chr5 172850723 172850893 -30234639 + MER90 LTR ERV1 439 614 0 2173 69 3 14 chr5 172850998 172851288 -30234244 + AluY SINE Alu 1 287 -24 207 0 0 0 chr5 172851299 172851322 -30234210 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1097 143 0 24 chr5 172851322 172851490 -30234042 + AluSg/x SINE Alu 127 290 -22 261 98 0 0 chr5 172851862 172851903 -30233629 + (A)n Simple_repeat Simple_repeat 1 41 0 219 241 48 41 chr5 172851972 172852117 -30233415 + (CAGAG)n Simple_repeat Simple_repeat 4 149 0 189 250 0 0 chr5 172852140 172852216 -30233316 + A-rich Low_complexity Low_complexity 1 76 0 331 352 0 0 chr5 172852234 172852410 -30233122 + A-rich Low_complexity Low_complexity 1 176 0 1956 121 3 10 chr5 172852521 172852811 -30232721 - AluSx SINE Alu -24 288 1 21 0 0 0 chr5 172853449 172853470 -30232062 + AT_rich Low_complexity Low_complexity 1 21 0 1208 95 4 1 chr5 172854182 172854428 -30231104 + AluSc SINE Alu 2 278 -31 216 0 0 0 chr5 172854429 172854453 -30231079 + (GA)n Simple_repeat Simple_repeat 1 24 0 3685 172 28 18 chr5 172854687 172855473 -30230059 + L1MB3 LINE L1 5181 5976 -207 1236 72 55 0 chr5 172855698 172855879 -30229653 + AluY SINE Alu 119 309 -2 2147 96 38 0 chr5 172855936 172856229 -30229303 - AluSp SINE Alu -8 305 2 702 284 64 23 chr5 172858358 172858700 -30226832 + L1M4 LINE L1 3703 4058 -2088 33586 48 3 1 chr5 172859574 172863743 -30221789 + L1P LINE L1 1059 5233 -913 7743 48 1 2 chr5 172863845 172865054 -30220478 + L1PA3 LINE L1 4943 6152 -3 29 60 0 0 chr5 172865052 172865102 -30220430 + AT_rich Low_complexity Low_complexity 1 50 0 291 350 69 0 chr5 172865406 172865566 -30219966 - MIR3 SINE MIR -2 206 36 622 178 19 0 chr5 172865686 172865793 -30219739 + L1PA10 LINE L1 6055 6163 -5 2138 113 3 10 chr5 172865808 172866109 -30219423 + AluSp SINE Alu 9 307 -6 270 295 83 13 chr5 172866149 172866305 -30219227 - L1ME4a LINE L1 -213 5908 5742 1694 161 4 0 chr5 172866350 172866604 -30218928 - AluSx SINE Alu -55 257 3 200 35 35 0 chr5 172866608 172866637 -30218895 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 8582 101 10 2 chr5 172866637 172868621 -30216911 - L1PA7 LINE L1 -16 6138 4141 12950 113 2 5 chr5 172868621 172870534 -30214998 + L1P LINE L1 2382 4289 -1857 7323 39 7 0 chr5 172870642 172871517 -30214015 + L1PA4 LINE L1 5268 6148 -7 540 256 88 47 chr5 172873078 172873418 -30212114 + L1M3 LINE L1 3705 4058 -2088 290 206 0 43 chr5 172874674 172874766 -30210766 - AluY SINE Alu 0 301 214 1630 176 33 27 chr5 172874904 172875239 -30210293 - MER1B DNA MER1_type 0 337 1 562 122 10 10 chr5 172875475 172875579 -30209953 - L1PA12 LINE L1 -172 5984 5888 680 219 15 0 chr5 172876701 172876838 -30208694 + L1M3 LINE L1 5569 5707 -476 2430 43 11 0 chr5 172876838 172877144 -30208388 - AluY SINE Alu 0 309 1 455 312 74 27 chr5 172878354 172878691 -30206841 - L1M4 LINE L1 -2090 4056 3704 1547 119 9 0 chr5 172880160 172880370 -30205162 + AluSg/x SINE Alu 97 308 -2 198 0 0 0 chr5 172880391 172880413 -30205119 + (CAA)n Simple_repeat Simple_repeat 3 24 0 347 157 83 66 chr5 172880432 172880553 -30204979 + L2 LINE L2 1897 2019 -1295 740 254 57 20 chr5 172880636 172880960 -30204572 + L1MC5 LINE L1 6923 7176 -632 337 212 237 30 chr5 172881050 172881248 -30204284 + L1MC5 LINE L1 7276 7514 -447 1494 199 11 28 chr5 172881260 172881546 -30203986 + AluJo SINE Alu 1 281 -31 357 177 0 0 chr5 172881548 172881627 -30203905 + (TA)n Simple_repeat Simple_repeat 2 80 0 228 284 0 27 chr5 172882025 172882099 -30203433 + L2 LINE L2 3195 3266 -47 307 224 86 43 chr5 172882143 172882259 -30203273 - MIR SINE MIR -61 201 81 323 242 61 61 chr5 172883737 172883935 -30201597 + MIR SINE MIR 65 262 0 357 296 138 5 chr5 172884850 172885053 -30200479 + MIR SINE MIR 33 262 0 402 21 0 0 chr5 172886077 172886124 -30199408 + (TG)n Simple_repeat Simple_repeat 2 48 0 3991 159 17 44 chr5 172887173 172887988 -30197544 - LTR57-int LTR ERVL -3978 1365 573 2490 53 0 10 chr5 172887988 172888289 -30197243 + AluY SINE Alu 1 298 -13 643 242 0 8 chr5 172888413 172888541 -30196991 + LTR57-int LTR ERVL 8 134 -5209 462 349 18 22 chr5 172888557 172888829 -30196703 + L1ME LINE L1 5463 5733 -429 * 578 154 31 33 chr5 172888791 172888957 -30196575 - L1M4 LINE L1 -680 5494 5335 1914 198 81 18 chr5 172888975 172889419 -30196113 + MER70A LTR ERVL 1 472 0 1636 102 18 4 chr5 172889521 172889746 -30195786 - AluSg/x SINE Alu -17 293 66 274 32 0 0 chr5 172889746 172889777 -30195755 + AluY SINE Alu 14 44 -258 237 159 0 0 chr5 172891330 172891374 -30194158 + CT-rich Low_complexity Low_complexity 2 45 0 465 19 0 0 chr5 172891799 172891853 -30193679 + (CA)n Simple_repeat Simple_repeat 2 55 0 2138 179 66 12 chr5 172892513 172892997 -30192535 - MER4B LTR ERV1 -11 768 94 832 97 7 90 chr5 172893002 172893022 -30192510 - AluSg/x SINE Alu -21 291 271 2252 60 39 3 chr5 172893022 172893307 -30192225 - AluY SINE Alu -16 295 1 832 97 7 90 chr5 172893307 172893431 -30192101 - AluSg/x SINE Alu -41 271 159 2091 122 10 3 chr5 172893682 172893985 -30191547 + AluSp SINE Alu 1 305 -8 1260 220 14 4 chr5 172895285 172895562 -30189970 - AluJb SINE Alu -28 284 5 180 245 0 0 chr5 172895769 172895822 -30189710 + CT-rich Low_complexity Low_complexity 3 55 0 210 128 0 0 chr5 172896397 172896436 -30189096 + (A)n Simple_repeat Simple_repeat 1 39 0 674 197 20 7 chr5 172896566 172896713 -30188819 + FRAM SINE Alu 22 170 -6 423 248 48 58 chr5 172896739 172896945 -30188587 + LTR33 LTR ERVL 299 502 -19 2160 99 48 0 chr5 172897346 172897638 -30187894 - AluSx SINE Alu -6 306 1 1884 133 8 0 chr5 172897696 172897960 -30187572 + AluSx SINE Alu 8 273 -39 386 132 9 123 chr5 172898009 172898115 -30187417 - L1MC4 LINE L1 -197 7845 7752 31 58 0 0 chr5 172899138 172899190 -30186342 + AT_rich Low_complexity Low_complexity 1 52 0 184 67 0 67 chr5 172899398 172899443 -30186089 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 2046 83 22 32 chr5 172899825 172900103 -30185429 + AluSq SINE Alu 37 311 -2 1957 110 27 7 chr5 172901684 172901976 -30183556 + AluSx SINE Alu 1 298 -14 1556 157 33 30 chr5 172902115 172902534 -30182998 - AluJo SINE Alu 0 426 7 580 184 32 0 chr5 172903370 172903495 -30182037 + AluJo SINE Alu 109 237 -75 1572 168 3 27 chr5 172903950 172904247 -30181285 + AluJo SINE Alu 15 304 -8 296 226 29 66 chr5 172904290 172904427 -30181105 - MER104 DNA Tc2 -44 136 5 606 121 22 0 chr5 172904545 172904636 -30180896 - AluSc SINE Alu -215 94 2 187 270 40 27 chr5 172904644 172904718 -30180814 - L3 LINE CR1 -193 1384 1310 396 97 0 0 chr5 172905230 172905292 -30180240 + (TG)n Simple_repeat Simple_repeat 2 63 0 24 77 0 0 chr5 172905933 172905985 -30179547 + AT_rich Low_complexity Low_complexity 1 52 0 323 103 0 17 chr5 172906041 172906099 -30179433 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 207 218 26 58 chr5 172906235 172906391 -30179141 + (TATATG)n Simple_repeat Simple_repeat 3 153 0 231 244 244 0 chr5 172907568 172907650 -30177882 + MIR SINE MIR 49 150 -112 808 258 118 53 chr5 172907723 172907844 -30177688 + LTR16C LTR ERVL 89 201 -290 2068 116 4 4 chr5 172907844 172908121 -30177411 - AluSq SINE Alu -36 277 1 808 258 118 53 chr5 172908121 172908356 -30177176 + LTR16C LTR ERVL 201 468 -23 379 266 64 9 chr5 172908431 172908540 -30176992 + L2 LINE L2 3199 3313 0 31879 62 2 0 chr5 172909155 172913188 -30172344 + L1P LINE L1 1 4041 -2105 29 60 0 0 chr5 172913517 172913567 -30171965 + AT_rich Low_complexity Low_complexity 1 50 0 939 156 134 6 chr5 172914147 172914326 -30171206 + AluSq SINE Alu 67 268 -45 396 291 33 46 chr5 172914429 172914580 -30170952 + LTR33 LTR ERVL 17 165 -356 372 22 0 0 chr5 172915266 172915311 -30170221 + (CA)n Simple_repeat Simple_repeat 2 46 0 2659 161 66 23 chr5 172915975 172916554 -30168978 - MER4B LTR ERV1 -11 768 1 2284 75 0 3 chr5 172917016 172917298 -30168234 - AluY SINE Alu -30 281 1 1992 103 41 0 chr5 172917298 172917569 -30167963 - AluSq SINE Alu -8 305 24 2637 59 0 0 chr5 172917971 172918274 -30167258 - AluY SINE Alu -8 303 1 1448 191 7 7 chr5 172918857 172919134 -30166398 - AluJb SINE Alu -31 281 5 296 24 0 24 chr5 172919288 172919330 -30166202 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 196 151 19 19 chr5 172919373 172919426 -30166106 + CT-rich Low_complexity Low_complexity 3 55 0 182 88 0 29 chr5 172920022 172920056 -30165476 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2770 109 53 17 chr5 172971165 172971578 -30113954 - MSTC LTR MaLR 0 428 1 2874 10 0 0 chr5 172971605 172971914 -30113618 - AluYa5 SINE Alu -2 309 1 196 58 101 14 chr5 172972052 172972121 -30113411 + (TA)n Simple_repeat Simple_repeat 2 76 0 24 67 0 0 chr5 172972125 172972170 -30113362 + AT_rich Low_complexity Low_complexity 1 45 0 489 58 0 0 chr5 172972504 172972573 -30112959 + (GA)n Simple_repeat Simple_repeat 1 69 0 247 122 102 0 chr5 172972832 172972881 -30112651 + MIR SINE MIR 112 165 -97 481 254 105 92 chr5 172973236 172973551 -30111981 + L2 LINE L2 2995 3313 0 190 256 0 0 chr5 172974640 172974679 -30110853 + MIR SINE MIR 29 67 -141 196 217 43 14 chr5 172974801 172974870 -30110662 - MIR SINE MIR -7 255 185 26 0 0 0 chr5 172974925 172974951 -30110581 + AT_rich Low_complexity Low_complexity 1 26 0 242 377 131 29 chr5 172974957 172975132 -30110400 + L2 LINE L2 3063 3255 -17 421 191 71 71 chr5 172975154 172975280 -30110252 + L2 LINE L2 3188 3313 0 413 273 47 7 chr5 172976502 172976652 -30108880 - MIR SINE MIR -9 253 98 269 253 120 0 chr5 172976761 172976836 -30108696 + L2 LINE L2 3210 3293 -20 434 292 29 7 chr5 172977320 172977457 -30108075 - MIR SINE MIR -2 260 121 3668 60 0 7 chr5 172977654 172978105 -30107427 - LTR7 LTR ERV1 -2 448 1 2561 88 45 3 chr5 172978105 172978481 -30107051 - HERVH LTR ERV1 0 7713 7322 507 80 13 0 chr5 172978597 172978672 -30106860 - HERVH LTR ERV1 -2026 5687 5612 4409 146 1 1 chr5 172978694 172979354 -30106178 - HERVH LTR ERV1 -2564 5149 4490 3415 115 0 4 chr5 172979358 172979854 -30105678 - HERVH LTR ERV1 -3720 3993 3500 875 155 20 0 chr5 172979853 172980001 -30105531 - HERVH LTR ERV1 -4423 3290 3140 * 20176 98 26 6 chr5 172979995 172982923 -30102609 - HERVH LTR ERV1 -4726 2987 1 3670 64 0 7 chr5 172982938 172983389 -30102143 - LTR7 LTR ERV1 -2 448 1 223 290 0 58 chr5 172985508 172985577 -30099955 - MIR SINE MIR -122 86 22 577 215 52 5 chr5 172985645 172985815 -30099717 - MIR SINE MIR -55 207 33 200 317 32 49 chr5 172985894 172986017 -30099515 - MIR SINE MIR -95 167 47 387 218 203 15 chr5 172986286 172986419 -30099113 - MIR3 SINE MIR -48 160 3 216 346 25 0 chr5 172986920 172987001 -30098531 + MIR SINE MIR 33 115 -93 487 320 113 33 chr5 172987172 172987534 -30097998 + L2 LINE L2 2824 3214 -58 371 214 4 83 chr5 172987536 172987700 -30097832 + L1ME1 LINE L1 5860 5999 -167 798 187 27 0 chr5 172987704 172987854 -30097678 + L1MA10 LINE L1 6169 6322 -12 199 367 0 0 chr5 172989599 172989659 -30095873 - L2 LINE L2 -76 3196 3137 351 329 52 87 chr5 172989789 172990293 -30095239 + L2 LINE L2 2406 2891 -423 430 252 122 8 chr5 172990465 172990588 -30094944 + L2 LINE L2 3175 3311 -2 654 249 104 72 chr5 172990870 172991256 -30094276 - MLT1I LTR MaLR -2 407 10 2025 128 14 0 chr5 172991290 172991586 -30093946 - AluSx SINE Alu -10 302 3 3353 112 94 0 chr5 172991597 172992098 -30093434 - MER41B LTR ERV1 -87 548 1 9167 110 18 27 chr5 172992105 172993587 -30091945 - MER41B-int LTR ERV1 -5 5941 4596 476 269 79 53 chr5 172993729 172993842 -30091690 + L2 LINE L2 707 816 -2498 1856 138 30 16 chr5 172993842 172994146 -30091386 - AluSx SINE Alu -4 308 1 476 269 79 53 chr5 172994146 172994259 -30091273 + L2 LINE L2 816 939 -2375 2121 150 0 0 chr5 172994268 172994574 -30090958 - AluSx SINE Alu -6 306 1 1012 151 73 22 chr5 172994607 172994786 -30090746 - MER21B LTR ERV1 -369 494 307 3887 275 159 32 chr5 172994786 172996890 -30088642 + L2 LINE L2 960 3313 0 555 335 6 11 chr5 172996951 172997127 -30088405 + MIR3 SINE MIR 10 184 -24 1090 307 47 66 chr5 172997278 172998090 -30087442 + L2 LINE L2 2508 3313 0 555 335 6 11 chr5 172998151 172998327 -30087205 + MIR3 SINE MIR 10 184 -24 339 25 0 0 chr5 172999074 172999114 -30086418 + (TC)n Simple_repeat Simple_repeat 1 40 0 380 318 118 57 chr5 172999333 172999682 -30085850 + L2 LINE L2 2921 3290 -23 390 260 31 0 chr5 172999704 172999800 -30085732 + MIR SINE MIR 161 259 -3 215 267 53 13 chr5 173000090 173000165 -30085367 + L2 LINE L2 1329 1406 -1908 2438 83 0 0 chr5 173000288 173000590 -30084942 - L1PA7 LINE L1 -7 6147 5846 513 47 0 0 chr5 173000642 173000706 -30084826 + (TG)n Simple_repeat Simple_repeat 1 64 0 202 211 0 0 chr5 173000728 173000766 -30084766 + CT-rich Low_complexity Low_complexity 1 38 0 654 211 91 29 chr5 173000783 173001025 -30084507 - L1MC5 LINE L1 -53 7908 7652 16549 165 9 7 chr5 173001025 173003372 -30082160 - L1P LINE L1 -1935 4211 1857 2134 107 0 7 chr5 173003372 173003760 -30081772 - AluSc SINE Alu 0 386 1 16549 165 9 7 chr5 173003760 173004330 -30081202 - L1P LINE L1 -4289 1857 1289 21 0 0 0 chr5 173004389 173004410 -30081122 + AT_rich Low_complexity Low_complexity 1 21 0 387 167 26 13 chr5 173004479 173004557 -30080975 - L1MC5 LINE L1 -491 7470 7392 236 231 19 0 chr5 173004994 173005046 -30080486 - L2 LINE L2 -1 3271 3219 440 275 101 108 chr5 173005221 173005647 -30079885 + L2 LINE L2 2850 3272 0 226 323 133 57 chr5 173005653 173006149 -30079383 + L2 LINE L2 1861 2394 -920 303 288 30 38 chr5 173006583 173006715 -30078817 + HAL1 LINE L1 2016 2146 -361 190 259 0 19 chr5 173006879 173006933 -30078599 + L2 LINE L2 2691 2743 -571 1240 118 15 20 chr5 173007008 173007203 -30078329 - MER20 DNA MER1_type -2 217 24 327 25 0 0 chr5 173007241 173007281 -30078251 + (CA)n Simple_repeat Simple_repeat 2 41 0 668 283 124 9 chr5 173007668 173007901 -30077631 - MIR SINE MIR 0 262 3 780 274 47 21 chr5 173008407 173008641 -30076891 - MIR SINE MIR -5 257 18 361 300 64 28 chr5 173011278 173011475 -30074057 + MIR SINE MIR 27 233 -29 192 263 0 0 chr5 173011544 173011582 -30073950 + MIR SINE MIR 194 231 -31 459 268 52 20 chr5 173012349 173012502 -30073030 + MIR3 SINE MIR 44 201 -7 804 256 37 29 chr5 173013057 173013303 -30072229 + MIR SINE MIR 1 248 -14 787 288 203 21 chr5 173013532 173014310 -30071222 - L2 LINE L2 0 3313 2358 342 300 36 29 chr5 173014548 173014688 -30070844 - MIR SINE MIR -55 207 67 24 67 0 0 chr5 173015194 173015239 -30070293 + AT_rich Low_complexity Low_complexity 1 45 0 380 271 99 52 chr5 173015364 173015556 -30069976 - MIR3 SINE MIR -6 202 2 345 294 64 43 chr5 173015557 173015744 -30069788 - MIR3 SINE MIR -5 203 13 204 125 0 0 chr5 173015810 173015842 -30069690 + (TA)n Simple_repeat Simple_repeat 2 33 0 517 253 27 77 chr5 173015842 173016063 -30069469 + MER102b DNA MER1_type 132 341 0 1063 233 14 18 chr5 173016463 173016682 -30068850 - MER20 DNA MER1_type -1 218 1 259 286 83 101 chr5 173016991 173017435 -30068097 + L2 LINE L2 2832 3267 -5 221 209 0 0 chr5 173017920 173017963 -30067569 - L3 LINE CR1 -5 1572 1530 383 311 124 13 chr5 173018043 173018268 -30067264 + MIR SINE MIR 5 254 -8 225 306 124 8 chr5 173018649 173018770 -30066762 + MIR SINE MIR 73 207 -55 180 179 0 0 chr5 173019712 173019751 -30065781 + GA-rich Low_complexity Low_complexity 1 39 0 214 184 0 20 chr5 173019908 173019957 -30065575 + GA-rich Low_complexity Low_complexity 1 48 0 217 261 14 14 chr5 173020494 173020563 -30064969 + (TATG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr5 173021884 173021905 -30063627 + AT_rich Low_complexity Low_complexity 1 21 0 186 286 20 0 chr5 173024332 173024381 -30061151 - MIR SINE MIR -12 250 201 673 273 29 16 chr5 173024405 173024614 -30060918 - MIR SINE MIR -12 250 41 245 324 108 0 chr5 173025551 173025625 -30059907 - L2 LINE L2 -48 3224 3143 548 301 0 0 chr5 173026591 173026714 -30058818 - L2 LINE L2 0 3272 3150 205 363 44 26 chr5 173026716 173026829 -30058703 + MER5B DNA MER1_type 1 115 -63 305 281 136 63 chr5 173027245 173027466 -30058066 + MER102a DNA MER1_type 94 330 0 485 280 25 25 chr5 173027863 173028020 -30057512 + Charlie8 DNA MER1_type 107 263 -2154 309 343 139 10 chr5 173028258 173028459 -30057073 - MIR SINE MIR -4 258 32 2364 107 0 3 chr5 173028497 173028807 -30056725 + AluSc SINE Alu 1 309 0 310 294 22 11 chr5 173029494 173029586 -30055946 - MER117 DNA MER1_type -21 176 84 297 75 0 0 chr5 173029734 173029774 -30055758 + (TC)n Simple_repeat Simple_repeat 2 41 0 330 26 0 0 chr5 173029775 173029814 -30055718 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 335 123 34 chr5 173029972 173030151 -30055381 + MIR3 SINE MIR 2 196 -12 264 281 250 25 chr5 173030342 173030502 -30055030 - L2 LINE L2 0 3313 3118 327 245 39 29 chr5 173030650 173030752 -30054780 - L2 LINE L2 -510 2804 2702 425 244 25 0 chr5 173032196 173032315 -30053217 - L1ME LINE L1 -299 5822 5701 201 256 128 0 chr5 173032456 173032542 -30052990 + MIR SINE MIR 64 160 -102 917 261 51 78 chr5 173032944 173033474 -30052058 - MLT1K LTR MaLR -6 582 17 187 189 14 14 chr5 173033477 173033551 -30051981 + (TA)n Simple_repeat Simple_repeat 2 75 0 334 243 22 24 chr5 173034711 173034822 -30050710 + MLT1G LTR MaLR 434 578 -2 543 306 75 18 chr5 173034835 173035113 -30050419 - L2 LINE L2 -36 3277 2984 432 0 0 0 chr5 173035474 173035522 -30050010 + (TG)n Simple_repeat Simple_repeat 2 49 0 205 286 16 16 chr5 173035536 173035599 -30049933 + L3 LINE CR1 1502 1564 -13 1981 144 3 3 chr5 173036006 173036312 -30049220 + AluSx SINE Alu 5 310 -2 181 294 115 71 chr5 173036623 173037116 -30048416 + L2 LINE L2 2440 2956 -316 474 254 184 33 chr5 173037132 173037376 -30048156 - L2 LINE L2 -23 3290 3010 934 213 5 15 chr5 173037385 173037582 -30047950 + MER3 DNA MER1_type 13 207 -2 281 156 0 109 chr5 173037541 173037605 -30047927 - MER3 DNA MER1_type -119 90 34 * 383 316 228 0 chr5 173037610 173037847 -30047685 - L2 LINE L2 -353 2961 2671 266 171 200 0 chr5 173037879 173037949 -30047583 - MLT1I LTR MaLR 0 409 326 305 278 110 22 chr5 173038165 173038306 -30047226 - MLT1H LTR MaLR -238 174 50 334 331 47 6 chr5 173038337 173038506 -30047026 - L2 LINE L2 -671 2643 2468 578 300 135 0 chr5 173038767 173038997 -30046535 + MIR SINE MIR 2 262 0 26 0 0 0 chr5 173039286 173039312 -30046220 + AT_rich Low_complexity Low_complexity 1 26 0 407 254 63 7 chr5 173040111 173040253 -30045279 + MER103 DNA DNA 2 151 -15 262 350 112 11 chr5 173041490 173041750 -30043782 + L3 LINE CR1 1137 1422 -155 900 217 137 77 chr5 173041959 173042309 -30043223 + MLT1A2 LTR MaLR 3 373 -1 310 333 29 9 chr5 173042712 173042817 -30042715 + MIR SINE MIR 23 129 -79 369 363 26 31 chr5 173042886 173043112 -30042420 + MIR SINE MIR 12 236 -26 3169 169 9 2 chr5 173043377 173043916 -30041616 - L1 LINE L1 -1022 5124 4582 * 5312 158 23 26 chr5 173043914 173044915 -30040617 + L1MA7 LINE L1 5293 6290 -1 2241 116 0 0 chr5 173045097 173045398 -30040134 + AluY SINE Alu 1 301 -10 200 285 64 81 chr5 173045534 173045706 -30039826 - MIR SINE MIR -44 218 50 180 288 50 50 chr5 173045682 173045762 -30039770 + MIR SINE MIR 39 118 -90 * 862 272 120 68 chr5 173046767 173047574 -30037958 + L2 LINE L2 2455 3307 -6 241 337 43 0 chr5 173047614 173047706 -30037826 - L2 LINE L2 -40 3232 3137 511 235 49 91 chr5 173047816 173048059 -30037473 - MIR SINE MIR -18 244 12 855 187 10 84 chr5 173048062 173048140 -30037392 + MER5A DNA MER1_type 1 83 -106 2182 96 10 3 chr5 173048140 173048442 -30037090 + AluY SINE Alu 1 304 -7 855 187 10 84 chr5 173048442 173048566 -30036966 + MER5A DNA MER1_type 83 188 -1 196 333 0 101 chr5 173049764 173049893 -30035639 + MIR SINE MIR 30 145 -63 392 301 124 26 chr5 173049977 173050203 -30035329 - MIR SINE MIR -3 259 12 23 33 0 0 chr5 173051049 173051079 -30034453 + AT_rich Low_complexity Low_complexity 1 30 0 633 253 170 6 chr5 173051259 173051441 -30034091 + MIR SINE MIR 14 225 -37 210 311 0 0 chr5 173051474 173051535 -30033997 - MIR SINE MIR -75 187 127 1073 256 56 47 chr5 173051615 173051974 -30033558 - MLT1I LTR MaLR 0 409 48 229 326 10 0 chr5 173051994 173052092 -30033440 + MIR SINE MIR 160 258 -4 288 0 0 0 chr5 173052174 173052206 -30033326 + (TC)n Simple_repeat Simple_repeat 1 32 0 297 371 36 18 chr5 173052712 173052879 -30032653 + MIR SINE MIR 20 189 -73 426 228 0 11 chr5 173052913 173053005 -30032527 + L2 LINE L2 3223 3313 0 2006 118 0 10 chr5 173053206 173053503 -30032029 + AluSc SINE Alu 1 294 -15 1186 179 18 49 chr5 173054351 173054574 -30030958 + MER20 DNA MER1_type 1 216 -3 413 34 34 0 chr5 173054608 173054667 -30030865 + L1MA1 LINE L1 6242 6302 0 251 175 0 35 chr5 173055250 173055307 -30030225 + MIR SINE MIR 99 153 -109 198 290 212 31 chr5 173055817 173056010 -30029522 - MIR SINE MIR -22 240 13 * 538 253 83 23 chr5 173055937 173056168 -30029364 + MIR SINE MIR 5 243 -19 6737 156 35 31 chr5 173056285 173057526 -30028006 + Ricksha_b DNA DNA 8 1254 0 1185 149 22 0 chr5 173057609 173057790 -30027742 - MER5A DNA MER1_type -4 185 1 218 194 0 113 chr5 173059045 173059107 -30026425 + MIR SINE MIR 81 135 -73 646 304 80 0 chr5 173059233 173059457 -30026075 - MIR SINE MIR -19 243 2 680 374 28 26 chr5 173060007 173060467 -30025065 - L2 LINE L2 -8 3264 2804 206 279 47 35 chr5 173060587 173060673 -30024859 + L2 LINE L2 3162 3248 -24 357 259 130 0 chr5 173060744 173060852 -30024680 + L3 LINE CR1 1370 1491 -86 377 333 79 23 chr5 173060932 173061109 -30024423 - MIR SINE MIR -13 249 63 262 239 104 0 chr5 173061587 173061654 -30023878 + L2 LINE L2 3240 3313 0 324 300 185 35 chr5 173061924 173062014 -30023518 + MIR SINE MIR 29 104 -158 185 0 40 0 chr5 173062014 173062039 -30023493 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 324 300 185 35 chr5 173062039 173062148 -30023384 + MIR SINE MIR 104 258 -4 192 289 0 0 chr5 173062293 173062338 -30023194 + L3 LINE CR1 1530 1574 -3 430 281 88 47 chr5 173062958 173063150 -30022382 - MIR SINE MIR -33 229 30 214 364 40 10 chr5 173063783 173063882 -30021650 + MIR SINE MIR 1 102 -160 1899 151 14 0 chr5 173064068 173064386 -30021146 - AluSx SINE Alu 0 322 1 239 292 56 45 chr5 173065036 173065214 -30020318 + L2 LINE L2 2562 2741 -573 199 234 16 47 chr5 173065701 173065765 -30019767 + L2 LINE L2 3207 3268 -4 501 296 53 13 chr5 173066047 173066199 -30019333 + MIR SINE MIR 14 171 -91 326 179 15 0 chr5 173067432 173067499 -30018033 - L1MB8 LINE L1 -1 6177 6110 786 209 171 23 chr5 173068251 173068643 -30016889 + MER113 DNA MER1_type? 1 450 -71 291 325 122 0 chr5 173068673 173068796 -30016736 + MIR3 SINE MIR 47 184 -24 245 302 17 60 chr5 173068800 173068916 -30016616 + MER5A DNA MER1_type 7 117 -72 763 326 147 5 chr5 173069717 173070177 -30015355 - L2 LINE L2 0 3313 2790 268 314 83 8 chr5 173070528 173070649 -30014883 - MIR SINE MIR -8 254 125 2301 117 0 0 chr5 173070814 173071123 -30014409 + AluSc SINE Alu 1 309 0 199 304 14 14 chr5 173071825 173071894 -30013638 + MIR SINE MIR 55 123 -85 196 328 26 115 chr5 173071861 173072053 -30013479 + L2 LINE L2 2985 3159 -113 * 224 287 35 46 chr5 173072055 173072142 -30013390 + MIR SINE MIR 3 88 -174 185 328 0 31 chr5 173072229 173072293 -30013239 + L2 LINE L2 3221 3282 -31 197 146 21 0 chr5 173072298 173072346 -30013186 + (ATGGTG)n Simple_repeat Simple_repeat 5 53 0 180 200 0 0 chr5 173072416 173072456 -30013076 + (TGG)n Simple_repeat Simple_repeat 1 40 0 423 314 57 38 chr5 173072479 173072689 -30012843 - MIR SINE MIR -3 259 46 183 222 0 0 chr5 173072742 173072787 -30012745 + GA-rich Low_complexity Low_complexity 4 48 0 748 236 173 42 chr5 173072949 173073262 -30012270 - L2 LINE L2 0 3313 2960 207 317 10 58 chr5 173074071 173074175 -30011357 + MIR SINE MIR 38 137 -71 759 175 0 0 chr5 173074796 173074910 -30010622 - MER58A DNA MER1_type 0 224 111 483 212 71 0 chr5 173074963 173075062 -30010470 - MER58A DNA MER1_type -1 106 1 422 315 81 15 chr5 173075696 173075893 -30009639 - MIR SINE MIR -38 224 15 274 258 21 75 chr5 173076057 173076150 -30009382 + L2 LINE L2 3190 3277 -36 1617 99 45 5 chr5 173076232 173076453 -30009079 - MER30 DNA MER1_type 0 230 1 192 314 0 0 chr5 173076535 173076586 -30008946 + L2 LINE L2 3253 3303 -10 314 333 156 4 chr5 173076891 173077116 -30008416 + L3 LINE CR1 1296 1554 -23 261 242 53 63 chr5 173077586 173077681 -30007851 - MIR SINE MIR -65 143 50 479 281 115 17 chr5 173077820 173078169 -30007363 - L1ME4a LINE L1 -5 6116 5734 417 328 48 32 chr5 173079106 173079295 -30006237 + MIR SINE MIR 56 247 -15 279 212 142 53 chr5 173079819 173079932 -30005600 + MIR SINE MIR 75 197 -65 873 183 0 81 chr5 173079936 173080045 -30005487 - MER5A DNA MER1_type -18 171 82 571 0 0 110 chr5 173080045 173080127 -30005405 - L1PA3 LINE L1 -1 6154 6082 873 183 0 81 chr5 173080127 173080203 -30005329 - MER5A DNA MER1_type -107 82 1 428 299 102 96 chr5 173081253 173081588 -30003944 + MER102b DNA MER1_type 1 337 -4 471 241 102 48 chr5 173081654 173081820 -30003712 + MER5B DNA MER1_type 1 175 -3 250 214 36 0 chr5 173081839 173081895 -30003637 - MER5A DNA MER1_type -8 181 124 211 108 27 27 chr5 173081862 173081899 -30003633 + MER5A DNA MER1_type 43 79 -110 * 182 277 200 0 chr5 173081897 173081962 -30003570 - MER5A DNA MER1_type -101 88 11 * 808 184 0 0 chr5 173082104 173082229 -30003303 - FLAM_C SINE Alu -18 125 1 4428 151 27 7 chr5 173082408 173083117 -30002415 - MER50 LTR ERV1 -11 723 1 213 273 64 27 chr5 173083538 173083648 -30001884 + MER5A DNA MER1_type 26 139 -50 2236 108 3 0 chr5 173083662 173083958 -30001574 - AluSq SINE Alu -16 297 1 285 98 0 0 chr5 173085223 173085264 -30000268 + (CA)n Simple_repeat Simple_repeat 1 41 0 4441 203 26 3 chr5 173086225 173087299 -29998233 + L1P4 LINE L1 4381 5479 -686 227 356 62 14 chr5 173087478 173087624 -29997908 - MIR SINE MIR -59 203 51 196 324 38 57 chr5 173087943 173088048 -29997484 + L2 LINE L2 3210 3312 -1 260 350 17 8 chr5 173088064 173088181 -29997351 + MIR3 SINE MIR 85 202 -6 6996 117 33 78 chr5 173088265 173088744 -29996788 - Tigger3b DNA MER2_type -1797 1231 732 718 229 83 6 chr5 173088744 173088901 -29996631 - FAM SINE Alu -6 169 1 6996 117 33 78 chr5 173088901 173089708 -29995824 - Tigger3b DNA MER2_type -2296 732 2 2282 214 23 15 chr5 173089709 173090236 -29995296 - L1ME1 LINE L1 -7 6159 5629 252 304 22 11 chr5 173090262 173090354 -29995178 + Charlie4 DNA MER1_type 1867 1959 -2 193 304 0 63 chr5 173090840 173090919 -29994613 + MIR SINE MIR 42 115 -93 1628 179 25 7 chr5 173090999 173091279 -29994253 - Tigger3(Golem) DNA MER2_type -2743 286 2 465 292 23 8 chr5 173091480 173091610 -29993922 - MIR SINE MIR -116 146 15 2330 116 52 3 chr5 173091871 173092215 -29993317 + THE1B LTR MaLR 1 361 -3 220 264 96 40 chr5 173092903 173093028 -29992504 - MIR SINE MIR -126 136 5 * 354 313 51 51 chr5 173092974 173093188 -29992344 + MIR SINE MIR 33 246 -16 273 98 0 0 chr5 173094150 173094191 -29991341 + (TGAG)n Simple_repeat Simple_repeat 3 43 0 2315 101 0 0 chr5 173094368 173094664 -29990868 + AluSc SINE Alu 1 296 -13 411 216 1 58 chr5 173095868 173095994 -29989538 - MLT1G3 LTR MaLR 0 582 461 447 262 255 0 chr5 173095996 173096137 -29989395 - MLT1G3 LTR MaLR -182 348 172 202 250 158 0 chr5 173096419 173096495 -29989037 - MIR SINE MIR -6 256 169 4866 170 14 51 chr5 173096899 173097776 -29987756 - L1MB8 LINE L1 0 6178 5270 2175 116 10 7 chr5 173097776 173098077 -29987455 - AluSq SINE Alu -11 302 1 4866 170 14 51 chr5 173098077 173098188 -29987344 - L1MB8 LINE L1 -908 5270 5236 2485 80 0 0 chr5 173098188 173098488 -29987044 - AluSq SINE Alu -13 300 1 4866 170 14 51 chr5 173098488 173098611 -29986921 - L1MB8 LINE L1 -942 5236 5110 594 274 83 15 chr5 173098627 173098831 -29986701 - L2 LINE L2 -1 3312 3095 747 163 35 159 chr5 173098885 173099112 -29986420 - MER20 DNA MER1_type -19 200 2 482 301 67 37 chr5 173099120 173099410 -29986122 - L2 LINE L2 -256 3057 2748 316 326 0 11 chr5 173099519 173099608 -29985924 - MIR3 SINE MIR -109 99 12 693 195 169 0 chr5 173099766 173099920 -29985612 + MER5A DNA MER1_type 10 189 0 270 312 124 77 chr5 173100392 173100690 -29984842 + L2 LINE L2 2946 3257 -15 403 269 30 17 chr5 173101255 173101417 -29984115 - MIR SINE MIR -55 153 47 254 215 43 75 chr5 173101699 173101792 -29983740 - MER113 DNA MER1_type? -102 419 330 676 267 50 0 chr5 173102121 173102301 -29983231 + MIR SINE MIR 72 260 -2 878 209 47 33 chr5 173102513 173102728 -29982804 - MER20 DNA MER1_type 0 219 2 1416 180 125 7 chr5 173102798 173103103 -29982429 - MER58B DNA MER1_type 0 341 1 383 273 20 0 chr5 173103940 173104039 -29981493 + MER117 DNA MER1_type 56 156 -41 425 319 5 43 chr5 173104760 173104945 -29980587 + MIR SINE MIR 79 256 -6 309 246 0 0 chr5 173105022 173105079 -29980453 + MIR SINE MIR 51 107 -101 324 328 38 15 chr5 173105110 173105241 -29980291 - L2 LINE L2 -1 3271 3138 253 394 19 19 chr5 173105536 173105691 -29979841 + MIR SINE MIR 8 162 -100 538 224 99 25 chr5 173106235 173106396 -29979136 + MIR3 SINE MIR 30 202 -6 267 31 0 0 chr5 173106661 173106693 -29978839 + (GA)n Simple_repeat Simple_repeat 2 33 0 211 349 35 0 chr5 173107035 173107121 -29978411 - MIR SINE MIR -70 138 50 303 354 8 23 chr5 173107504 173107634 -29977898 + MIR SINE MIR 33 160 -102 23 33 0 0 chr5 173108093 173108123 -29977409 + AT_rich Low_complexity Low_complexity 1 30 0 206 224 20 20 chr5 173108349 173108366 -29977166 + MIR SINE MIR 203 251 -11 219 125 0 0 chr5 173108366 173108398 -29977134 + L2 LINE L2 3265 3296 -17 1326 80 0 0 chr5 173108398 173108673 -29976859 + (TGGA)n Simple_repeat Simple_repeat 1 275 0 473 290 78 85 chr5 173109163 173109349 -29976183 - L2 LINE L2 0 3313 3127 2145 137 7 0 chr5 173109349 173109656 -29975876 + AluSx SINE Alu 3 311 -1 473 290 78 85 chr5 173109656 173110092 -29975440 - L2 LINE L2 -186 3127 2698 2187 95 0 3 chr5 173110105 173110411 -29975121 + AluSg SINE Alu 1 305 0 219 291 75 60 chr5 173111199 173111333 -29974199 - MIR3 SINE MIR -69 139 4 183 114 0 0 chr5 173111351 173111386 -29974146 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 606 266 114 78 chr5 173112735 173113219 -29972313 + L2 LINE L2 2697 3209 -104 1986 145 3 22 chr5 173113219 173113536 -29971996 - AluSx SINE Alu -1 311 1 606 266 114 78 chr5 173113536 173113645 -29971887 + L2 LINE L2 3209 3313 0 201 233 23 0 chr5 173113645 173113688 -29971844 - MIR SINE MIR -56 152 109 223 259 19 0 chr5 173114188 173114242 -29971290 - MER5A DNA MER1_type 0 189 135 1834 173 7 3 chr5 173114269 173114576 -29970956 - AluJo SINE Alu -4 308 1 814 173 0 0 chr5 173114576 173114709 -29970823 - AluJb SINE Alu -177 135 3 1852 217 23 30 chr5 173114733 173115162 -29970370 - MLT1C LTR MaLR 0 467 42 227 316 96 22 chr5 173115272 173115408 -29970124 - MIR3 SINE MIR -60 148 3 230 323 0 0 chr5 173116404 173116466 -29969066 - MIR SINE MIR -64 144 83 201 304 18 0 chr5 173116555 173116611 -29968921 - MIR SINE MIR -3 259 203 291 293 107 53 chr5 173116745 173116778 -29968754 + L2 LINE L2 2817 2847 -425 2356 104 0 0 chr5 173116778 173117087 -29968445 - AluSx SINE Alu -3 309 1 291 293 107 53 chr5 173117087 173117278 -29968254 + L2 LINE L2 2847 3053 -219 793 218 0 45 chr5 173117461 173117617 -29967915 + MER63A DNA MER1_type 57 205 -5 523 304 12 12 chr5 173117626 173117794 -29967738 + L2 LINE L2 3142 3309 -4 733 264 11 16 chr5 173117812 173117994 -29967538 - MIR SINE MIR -77 185 5 2383 165 75 2 chr5 173118551 173118950 -29966582 + MSTA LTR MaLR 1 428 0 432 323 42 131 chr5 173119171 173119667 -29965865 - L2 LINE L2 0 3272 2821 301 350 142 9 chr5 173119991 173120217 -29965315 + MIR SINE MIR 5 260 -2 204 333 79 0 chr5 173120391 173120454 -29965078 + L2 LINE L2 3205 3272 0 297 0 0 0 chr5 173121984 173122017 -29963515 + (TG)n Simple_repeat Simple_repeat 2 34 0 470 345 24 12 chr5 173122966 173123131 -29962401 + L2 LINE L2 3105 3271 -1 455 270 32 8 chr5 173123819 173123945 -29961587 + MIR SINE MIR 23 151 -57 392 232 30 55 chr5 173123999 173124163 -29961369 - HAL1 LINE L1 -14 2493 2334 1208 204 52 73 chr5 173124163 173124448 -29961084 - MLT1A2 LTR MaLR 0 426 116 1856 172 0 3 chr5 173124448 173124744 -29960788 + AluSx SINE Alu 2 296 -16 1208 204 52 73 chr5 173124744 173124858 -29960674 - MLT1A2 LTR MaLR -310 116 1 254 172 35 0 chr5 173124859 173124917 -29960615 - HAL1 LINE L1 -191 2316 2257 1383 291 87 37 chr5 173124924 173126006 -29959526 - HAL1 LINE L1 -341 2166 989 422 293 115 56 chr5 173126193 173126661 -29958871 - HAL1 LINE L1 -1986 521 26 787 133 33 55 chr5 173126700 173126881 -29958651 - L1MC3 LINE L1 -1 7784 7608 278 313 0 0 chr5 173126904 173126984 -29958548 - MLT1F1 LTR MaLR -453 114 35 795 159 6 0 chr5 173126984 173127147 -29958385 - L1MC3 LINE L1 -688 7097 6934 282 21 42 21 chr5 173127198 173127246 -29958286 + (TATAA)n Simple_repeat Simple_repeat 2 50 0 377 276 107 28 chr5 173127881 173128082 -29957450 - MIR3 SINE MIR -50 212 8 532 297 104 27 chr5 173128872 173129094 -29956438 + MIR SINE MIR 18 256 -6 1653 205 0 17 chr5 173129190 173129488 -29956044 + AluJb SINE Alu 1 293 -19 2266 108 0 3 chr5 173130336 173130643 -29954889 - AluY SINE Alu -5 306 1 1140 182 5 0 chr5 173130859 173131068 -29954464 + MER2 DNA MER2_type 1 210 -135 333 219 31 0 chr5 173131096 173131160 -29954372 + MER2 DNA MER2_type 280 345 0 2521 62 0 3 chr5 173131570 173131879 -29953653 + AluY SINE Alu 1 308 -3 384 296 114 0 chr5 173132434 173132566 -29952966 + L3 LINE CR1 1389 1535 -42 520 347 86 0 chr5 173132571 173132793 -29952739 - MIR SINE MIR -3 259 19 213 305 17 0 chr5 173133302 173133361 -29952171 - L2 LINE L2 -4 3268 3209 3958 31 2 0 chr5 173133495 173134022 -29951510 + L1PA3 LINE L1 5643 6170 0 350 259 72 50 chr5 173134038 173134177 -29951355 - MIR3 SINE MIR -25 183 42 3900 31 0 2 chr5 173134484 173134963 -29950569 - L1PA3 LINE L1 -99 6056 5579 271 48 0 0 chr5 173134959 173135001 -29950531 + L1PA3 LINE L1 6114 6155 0 * 485 290 77 11 chr5 173135233 173135416 -29950116 + MIR SINE MIR 68 262 0 202 224 20 0 chr5 173135416 173135465 -29950067 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 247 169 17 17 chr5 173135850 173135909 -29949623 + Charlie8 DNA MER1_type 81 139 -2278 334 270 38 38 chr5 173136185 173136344 -29949188 + L1M4 LINE L1 5055 5213 -933 1769 105 0 0 chr5 173136436 173136664 -29948868 + AluSg/x SINE Alu 69 296 -16 1904 229 53 13 chr5 173136708 173137231 -29948301 - L1ME3A LINE L1 -254 5899 5356 2212 256 98 16 chr5 173137273 173138302 -29947230 - L1ME3A LINE L1 -860 5269 4157 309 295 48 18 chr5 173138318 173138484 -29947048 - L1ME3A LINE L1 -2385 3744 3574 261 0 0 0 chr5 173138505 173138534 -29946998 + (TA)n Simple_repeat Simple_repeat 2 30 0 956 101 0 0 chr5 173138534 173138673 -29946859 - L1P5 LINE L1 -369 5782 5644 247 262 98 42 chr5 173138760 173138974 -29946558 - L1ME3A LINE L1 -2947 3182 2957 327 347 58 41 chr5 173138978 173139272 -29946260 - L1ME3A LINE L1 -4227 2083 1785 436 323 66 18 chr5 173139295 173140063 -29945469 - L1ME3A LINE L1 -4579 1731 927 339 335 29 59 chr5 173140145 173140384 -29945148 - L1ME3A LINE L1 -5299 820 589 359 328 46 10 chr5 173140623 173140856 -29944676 - L1ME LINE L1 -5877 242 2 2447 81 7 0 chr5 173141016 173141324 -29944208 - AluY SINE Alu -1 310 1 955 276 13 17 chr5 173142051 173142290 -29943242 + MIR SINE MIR 11 248 -14 482 279 75 6 chr5 173142487 173142648 -29942884 - MER5B DNA MER1_type -6 172 1 247 191 0 0 chr5 173142684 173142731 -29942801 - MER63 DNA MER1_type -37 1024 978 334 235 176 0 chr5 173142731 173142816 -29942716 - MER63 DNA MER1_type -84 752 27 274 307 52 20 chr5 173143032 173143185 -29942347 + Charlie8 DNA MER1_type 1 158 -2259 394 320 8 16 chr5 173143381 173143506 -29942026 + MIR SINE MIR 29 152 -56 385 295 121 0 chr5 173143888 173144037 -29941495 + MIR SINE MIR 84 250 -12 260 213 0 33 chr5 173145005 173145066 -29940466 + CT-rich Low_complexity Low_complexity 3 61 0 506 91 39 0 chr5 173145075 173145152 -29940380 + MADE1 DNA Mariner 1 80 0 453 264 186 68 chr5 173145396 173145793 -29939739 + L2 LINE L2 2826 3269 -44 900 241 67 36 chr5 173145831 173146084 -29939448 - MIR SINE MIR -1 261 1 275 256 64 0 chr5 173146573 173146651 -29938881 + L2 LINE L2 3231 3313 0 1625 187 0 38 chr5 173146823 173147138 -29938394 + AluJo SINE Alu 1 303 -9 458 325 22 26 chr5 173147145 173147376 -29938156 - MIR SINE MIR -8 254 25 446 329 98 61 chr5 173147601 173147839 -29937693 + L2 LINE L2 2933 3188 -84 1435 96 64 14 chr5 173147839 173148058 -29937474 + MER30 DNA MER1_type 1 230 0 446 329 98 61 chr5 173148058 173148147 -29937385 + L2 LINE L2 3188 3272 0 431 255 143 6 chr5 173148297 173148458 -29937074 + MIR SINE MIR 76 258 -4 354 287 25 114 chr5 173151275 173151477 -29934055 + MIR3 SINE MIR 23 206 -2 190 303 34 22 chr5 173152306 173152395 -29933137 + MIR SINE MIR 52 141 -121 715 217 0 0 chr5 173152786 173152915 -29932617 + FLAM_C SINE Alu 4 132 -11 1099 155 5 26 chr5 173153518 173153711 -29931821 + MER5A DNA MER1_type 1 189 0 492 355 64 20 chr5 173154222 173154473 -29931059 - L2 LINE L2 -42 3230 2969 391 275 28 18 chr5 173154468 173154577 -29930955 - MIR SINE MIR -141 121 12 * 370 298 69 21 chr5 173154580 173154768 -29930764 + MER117 DNA MER1_type 1 197 0 337 242 111 65 chr5 173156699 173156852 -29928680 + MIR3 SINE MIR 33 192 -16 687 330 22 0 chr5 173157217 173157447 -29928085 - MIR SINE MIR -9 253 19 266 266 181 2 chr5 173157487 173157621 -29927911 + MIR SINE MIR 24 180 -65 513 32 0 0 chr5 173157892 173157955 -29927577 + (TG)n Simple_repeat Simple_repeat 2 64 0 459 220 83 30 chr5 173158678 173158810 -29926722 - MIR SINE MIR -35 227 89 366 284 191 9 chr5 173159781 173159996 -29925536 + MIR SINE MIR 9 262 0 309 298 95 48 chr5 173160424 173160592 -29924940 - MIR3 SINE MIR -10 198 23 490 295 119 26 chr5 173161449 173161676 -29923856 + MIR SINE MIR 3 250 -12 267 31 0 0 chr5 173161717 173161749 -29923783 + (CAT)n Simple_repeat Simple_repeat 2 33 0 181 286 0 0 chr5 173162450 173162492 -29923040 - MIR3 SINE MIR -51 157 116 230 312 48 93 chr5 173163338 173163777 -29921755 - L2 LINE L2 -365 2949 2531 259 253 90 90 chr5 173163855 173164063 -29921469 + MIR SINE MIR 3 204 -58 193 303 172 0 chr5 173164052 173164151 -29921381 - MIR SINE MIR -24 238 123 * 466 306 67 91 chr5 173164160 173164579 -29920953 - L2 LINE L2 -9 3263 2855 268 239 130 11 chr5 173165125 173165217 -29920315 - MIR3 SINE MIR -23 185 83 769 293 109 34 chr5 173165284 173165500 -29920032 - L2 LINE L2 0 3313 3115 2514 65 0 7 chr5 173165500 173165807 -29919725 + AluY SINE Alu 1 305 -6 769 293 109 34 chr5 173165807 173166057 -29919475 - L2 LINE L2 -198 3115 2812 1135 192 4 51 chr5 173167838 173168072 -29917460 + MER58A DNA MER1_type 2 224 0 800 268 80 17 chr5 173168072 173168311 -29917221 + MIR SINE MIR 9 262 0 682 310 60 9 chr5 173168366 173168598 -29916934 + MIR SINE MIR 7 250 -12 312 286 0 14 chr5 173169659 173169729 -29915803 + L2 LINE L2 3195 3263 -50 863 299 98 42 chr5 173170716 173171265 -29914267 + L2 LINE L2 2731 3313 0 211 318 30 0 chr5 173171392 173171458 -29914074 - MIR3 SINE MIR -48 160 93 259 282 103 86 chr5 173172174 173172291 -29913241 + L2 LINE L2 3146 3264 -8 479 312 39 76 chr5 173173069 173173479 -29912053 + L2 LINE L2 2878 3272 0 829 161 0 0 chr5 173173911 173174029 -29911503 + AluJo SINE Alu 1 118 -184 616 170 0 0 chr5 173174030 173174130 -29911402 + AluJo SINE Alu 211 310 -2 500 279 30 51 chr5 173174682 173174879 -29910653 - MIR3 SINE MIR -6 202 10 248 216 0 0 chr5 173175008 173175059 -29910473 + CT-rich Low_complexity Low_complexity 2 52 0 820 285 81 57 chr5 173175948 173176566 -29908966 - L2 LINE L2 0 3313 2671 286 323 23 15 chr5 173176679 173176812 -29908720 + L3 LINE CR1 1437 1570 -7 359 260 10 10 chr5 173177000 173177100 -29908432 + MER103 DNA DNA 65 164 -2 303 275 61 53 chr5 173177882 173178059 -29907473 + MIR SINE MIR 31 213 -49 222 220 14 28 chr5 173178181 173178322 -29907210 + (TGGA)n Simple_repeat Simple_repeat 3 141 0 531 243 40 143 chr5 173178891 173179142 -29906390 + MIR SINE MIR 20 244 -18 192 111 0 0 chr5 173179166 173179202 -29906330 + (CAT)n Simple_repeat Simple_repeat 2 37 0 740 206 129 0 chr5 173179921 173180091 -29905441 + MIR SINE MIR 64 255 -7 2129 174 44 60 chr5 173180289 173180790 -29904742 + MLT1D LTR MaLR 13 505 0 210 105 0 0 chr5 173180890 173180928 -29904604 + (TTAG)n Simple_repeat Simple_repeat 3 40 0 2175 101 0 14 chr5 173180928 173181215 -29904317 - AluSq SINE Alu -30 283 1 196 350 0 0 chr5 173181227 173181287 -29904245 - L2 LINE L2 -22 3291 3232 471 329 63 6 chr5 173181375 173181607 -29903925 - MIR SINE MIR -2 260 13 1888 126 0 86 chr5 173182225 173182550 -29902982 + AluSx SINE Alu 2 298 -14 238 310 17 0 chr5 173182600 173182658 -29902874 + MIR SINE MIR 18 76 -186 1032 231 16 33 chr5 173183297 173183539 -29901993 + MIR SINE MIR 2 239 -23 520 346 52 9 chr5 173183778 173184009 -29901523 - MIR SINE MIR -4 258 18 273 357 45 39 chr5 173184171 173184325 -29901207 - MIR3 SINE MIR -23 185 31 396 284 7 34 chr5 173184487 173184635 -29900897 + L2 LINE L2 3169 3312 -1 206 336 105 8 chr5 173184715 173184953 -29900579 - L2 LINE L2 -338 2976 2716 639 257 14 47 chr5 173185071 173185285 -29900247 + L2 LINE L2 3107 3313 0 395 315 49 38 chr5 173185475 173185659 -29899873 + L2 LINE L2 3123 3308 -5 321 241 0 13 chr5 173185720 173185799 -29899733 - MER116 DNA Mariner 0 80 3 424 275 43 7 chr5 173186522 173186660 -29898872 + MIR3 SINE MIR 41 183 -25 208 295 16 0 chr5 173186781 173186842 -29898690 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 433 266 99 54 chr5 173186987 173187209 -29898323 + MIR SINE MIR 31 262 0 28 29 0 0 chr5 173187834 173187869 -29897663 + AT_rich Low_complexity Low_complexity 1 35 0 3426 153 43 16 chr5 173188124 173188731 -29896801 - L1MB8 LINE L1 -1 6177 5555 331 284 82 37 chr5 173189427 173189561 -29895971 - MIR3 SINE MIR -21 187 48 302 61 20 0 chr5 173190406 173190455 -29895077 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 327 282 72 47 chr5 173190455 173190627 -29894905 + MIR SINE MIR 45 220 -42 211 297 0 16 chr5 173190683 173190747 -29894785 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 317 195 23 69 chr5 173191453 173191540 -29893992 - MIR SINE MIR -82 180 98 442 283 120 30 chr5 173191721 173191954 -29893578 - MIR SINE MIR -3 259 6 22 0 0 0 chr5 173192308 173192330 -29893202 + AT_rich Low_complexity Low_complexity 1 22 0 560 295 33 16 chr5 173192694 173192877 -29892655 + MIR SINE MIR 7 192 -70 362 299 37 0 chr5 173192990 173193097 -29892435 + L2 LINE L2 3133 3243 -29 294 29 0 0 chr5 173193111 173193146 -29892386 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 441 363 17 45 chr5 173193269 173193671 -29891861 - L3 LINE CR1 -21 1556 1166 351 346 38 32 chr5 173194039 173194224 -29891308 - MIR3 SINE MIR -20 188 3 216 0 0 0 chr5 173194271 173194295 -29891237 + (CAGAGA)n Simple_repeat Simple_repeat 1 24 0 694 211 78 6 chr5 173194879 173195025 -29890507 + MIR SINE MIR 41 198 -64 220 280 152 38 chr5 173195025 173195157 -29890375 + MIR SINE MIR 4 150 -112 2162 130 0 0 chr5 173245323 173245644 -29839888 - AluSq SINE Alu 0 321 1 1360 193 113 6 chr5 173246029 173246340 -29839192 + MER7A DNA MER2_type 4 345 -1 28 0 0 0 chr5 173246813 173246841 -29838691 + AT_rich Low_complexity Low_complexity 1 28 0 336 329 133 0 chr5 173246905 173247048 -29838484 - MIR SINE MIR -98 164 3 261 0 0 0 chr5 173247230 173247259 -29838273 + (T)n Simple_repeat Simple_repeat 1 29 0 2657 184 23 32 chr5 173247755 173248311 -29837221 - L1PA12 LINE L1 -7021 560 10 839 239 47 55 chr5 173248323 173248636 -29836896 + Charlie7 DNA MER1_type 1488 1799 -813 2589 65 0 0 chr5 173248636 173248944 -29836588 + AluY SINE Alu 1 308 -3 839 239 47 55 chr5 173248944 173248994 -29836538 + Charlie7 DNA MER1_type 1799 1848 -764 314 325 147 13 chr5 173249336 173249493 -29836039 + MIR3 SINE MIR 19 196 -12 219 413 37 0 chr5 173249560 173249669 -29835863 + L2 LINE L2 2970 3082 -190 2329 152 70 8 chr5 173249680 173250081 -29835451 + MSTB LTR MaLR 1 426 0 381 303 56 52 chr5 173250194 173250518 -29835014 + L1ME LINE L1 3 327 -5743 1402 83 0 0 chr5 173250682 173250850 -29834682 - AluSc SINE Alu -141 168 1 232 242 22 77 chr5 173250853 173250944 -29834588 + L2 LINE L2 3182 3267 -5 310 347 168 22 chr5 173251266 173251753 -29833779 - L2 LINE L2 -1 3271 2720 2165 86 11 4 chr5 173251948 173252259 -29833273 + AluSc SINE Alu 1 313 0 300 192 27 27 chr5 173252295 173252368 -29833164 - HAL1b LINE L1 -39 1309 1237 186 103 0 0 chr5 173252374 173252403 -29833129 + (TG)n Simple_repeat Simple_repeat 2 30 0 328 286 29 43 chr5 173252419 173252559 -29832973 - L1MC4a LINE L1 -1896 5912 5775 663 282 142 48 chr5 173252783 173253333 -29832199 - L2 LINE L2 -357 2957 2333 2245 64 0 0 chr5 173253333 173253598 -29831934 - AluY SINE Alu -12 299 35 663 282 142 48 chr5 173253598 173253710 -29831822 - L2 LINE L2 -981 2333 2233 185 119 24 0 chr5 173253867 173253909 -29831623 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 279 237 118 0 chr5 173254694 173254770 -29830762 + MIR SINE MIR 137 221 -41 31 44 0 0 chr5 173254791 173254836 -29830696 + AT_rich Low_complexity Low_complexity 1 45 0 22 35 0 0 chr5 173255284 173255313 -29830219 + AT_rich Low_complexity Low_complexity 1 29 0 380 223 54 0 chr5 173256109 173256221 -29829311 + L1MD1 LINE L1 6125 6242 0 244 304 147 0 chr5 173256233 173256417 -29829115 + HAL1 LINE L1 1328 1538 -969 349 268 62 31 chr5 173256639 173256833 -29828699 + L1M4 LINE L1 2149 2348 -3798 365 282 75 17 chr5 173256900 173257141 -29828391 + L1M4 LINE L1 2362 2616 -3530 23 0 0 0 chr5 173257307 173257330 -29828202 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 173257566 173257596 -29827936 + AT_rich Low_complexity Low_complexity 1 30 0 223 330 34 73 chr5 173257646 173257879 -29827653 - L2 LINE L2 -214 3058 2835 559 237 82 31 chr5 173258771 173259062 -29826470 + L1ME4a LINE L1 5566 5871 -250 841 150 0 24 chr5 173259575 173259702 -29825830 + FLAM_C SINE Alu 6 129 -14 243 0 0 0 chr5 173259708 173259735 -29825797 + (TG)n Simple_repeat Simple_repeat 2 28 0 236 252 37 22 chr5 173260200 173260335 -29825197 + L1ME LINE L1 526 662 -5408 1649 211 11 108 chr5 173260362 173260926 -29824606 - MLT2B1 LTR ERVL -11 509 1 1986 291 62 12 chr5 173260937 173262765 -29822767 + L1ME LINE L1 723 2631 -3449 5060 142 33 10 chr5 173262773 173263735 -29821797 - L1MA6 LINE L1 -1 6299 5316 1484 107 0 0 chr5 173263751 173263975 -29821557 - L1PA13 LINE L1 0 6163 5940 1294 55 12 0 chr5 173264015 173264178 -29821354 - AluY SINE Alu -24 287 123 12758 149 13 15 chr5 173264186 173267179 -29818353 - L1PA13 LINE L1 -250 5913 2910 1965 140 35 88 chr5 173267179 173267596 -29817936 - MLT2A2 LTR ERVL 0 554 162 225 0 0 0 chr5 173267596 173267621 -29817911 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1965 140 35 88 chr5 173267621 173267775 -29817757 - MLT2A2 LTR ERVL -392 162 1 601 200 32 0 chr5 173267775 173267900 -29817632 - L1PA13 LINE L1 -3232 2914 2786 * 1496 176 8 28 chr5 173267891 173268243 -29817289 - L1MA6 LINE L1 -1240 4906 4562 210 326 128 32 chr5 173268359 173268546 -29816986 - L3b LINE CR1 -159 1424 1220 341 256 99 41 chr5 173268890 173269011 -29816521 + MER5A DNA MER1_type 1 128 -61 224 227 45 55 chr5 173270757 173270867 -29814665 - L2 LINE L2 -653 2661 2553 2480 191 24 8 chr5 173271958 173272455 -29813077 - LTR22 LTR ERVK -4 505 1 1313 204 123 49 chr5 173272505 173272975 -29812557 + MLT1D LTR MaLR 1 505 0 205 286 0 0 chr5 173273594 173273643 -29811889 + MIR3 SINE MIR 111 159 -49 388 304 6 36 chr5 173273666 173273834 -29811698 - MIR3 SINE MIR -7 201 39 349 281 89 27 chr5 173274018 173274242 -29811290 - L2 LINE L2 0 3313 3076 1493 276 39 35 chr5 173274866 173275717 -29809815 + L2 LINE L2 2450 3308 -5 962 157 0 7 chr5 173275800 173275953 -29809579 - MLT1B LTR MaLR 0 390 239 230 274 137 0 chr5 173276236 173276338 -29809194 - MLT1I LTR MaLR 0 409 294 836 211 39 72 chr5 173276462 173276759 -29808773 - L1ME2 LINE L1 -106 6058 5808 686 219 61 6 chr5 173277319 173277504 -29808028 - L1ME2 LINE L1 -295 5826 5634 2109 255 63 19 chr5 173277505 173278064 -29807468 - MLT1E LTR MaLR 0 593 6 1025 220 29 33 chr5 173278068 173278309 -29807223 - L1ME2 LINE L1 -527 5637 5398 6911 201 27 22 chr5 173278310 173280804 -29804728 + L1M3f LINE L1 1 2495 -3833 250 139 12 58 chr5 173281141 173281227 -29804305 + GA-rich Low_complexity Low_complexity 5 86 0 236 211 35 0 chr5 173286315 173286372 -29799160 + MIR SINE MIR 20 78 -130 1442 89 10 10 chr5 173286924 173287127 -29798405 - THE1C LTR MaLR 0 375 173 958 130 31 6 chr5 173287140 173287301 -29798231 - AluSg/x SINE Alu -18 292 128 1722 177 49 6 chr5 173289264 173289739 -29795793 + L1MC/D LINE L1 5108 5609 -747 5366 57 13 0 chr5 173289935 173291033 -29794499 - L1PA6 LINE L1 -227 5927 4813 981 107 59 6 chr5 173291196 173291365 -29794167 - AluSq SINE Alu -135 178 1 2501 65 0 0 chr5 173291421 173291712 -29793820 - AluY SINE Alu -20 291 1 236 263 61 35 chr5 173291825 173291939 -29793593 - MIR3 SINE MIR -31 177 61 374 317 117 65 chr5 173292462 173292895 -29792637 + L2 LINE L2 2753 3220 -93 2280 100 3 7 chr5 173292895 173293194 -29792338 - AluSc SINE Alu -11 298 1 374 317 117 65 chr5 173293194 173293288 -29792244 + L2 LINE L2 3220 3308 -5 215 335 108 21 chr5 173293887 173294081 -29791451 - L2 LINE L2 -384 2930 2720 1016 111 25 40 chr5 173294270 173294468 -29791064 + AluSc SINE Alu 1 195 -114 384 59 0 0 chr5 173294586 173294637 -29790895 + (CA)n Simple_repeat Simple_repeat 2 52 0 1940 140 55 0 chr5 173295119 173295411 -29790121 + AluSx SINE Alu 1 308 -4 3281 87 0 0 chr5 173295465 173295889 -29789643 + L1P LINE L1 1 424 -5722 4804 21 7 7 chr5 173295898 173296466 -29789066 + L1PA4 LINE L1 5585 6152 -3 1681 183 46 97 chr5 173296899 173297402 -29788130 - L1MB8 LINE L1 -222 5956 5480 1782 169 0 22 chr5 173297404 173297723 -29787809 - AluJo SINE Alu 0 312 1 446 212 166 1 chr5 173297730 173297907 -29787625 - L1MB8 LINE L1 -824 5322 5101 243 200 0 57 chr5 173298128 173298198 -29787334 + L2 LINE L2 3248 3313 0 775 276 92 32 chr5 173298602 173299036 -29786496 - L1MC4a LINE L1 -1638 6170 5711 777 102 0 116 chr5 173299054 173299201 -29786331 + FLAM_C SINE Alu 3 132 -1 276 276 75 65 chr5 173299401 173299564 -29785968 - L1ME4a LINE L1 -141 5980 5811 2297 74 3 26 chr5 173299564 173299874 -29785658 - AluY SINE Alu -8 303 1 276 276 75 65 chr5 173299874 173300003 -29785529 - L1ME4a LINE L1 -310 5811 5685 2298 110 0 0 chr5 173300022 173300323 -29785209 + AluSx SINE Alu 1 301 -11 1126 93 7 7 chr5 173300350 173300525 -29785007 - AluSx SINE Alu 0 307 133 6435 67 24 2 chr5 173300721 173301779 -29783753 + L1PA6 LINE L1 5063 6154 0 196 30 61 0 chr5 173301785 173301818 -29783714 + A-rich Low_complexity Low_complexity 3 37 0 2681 83 14 0 chr5 173302329 173302679 -29782853 - THE1A LTR MaLR 0 355 1 10071 109 50 3 chr5 173302679 173304172 -29781360 - THE1A-int LTR MaLR 0 1580 18 881 120 16 0 chr5 173304410 173304535 -29780997 - AluSx SINE Alu -185 127 1 22 0 0 0 chr5 173305399 173305421 -29780111 + AT_rich Low_complexity Low_complexity 1 22 0 1277 167 38 126 chr5 173305430 173305748 -29779784 + AluJo SINE Alu 3 292 -20 2100 115 6 34 chr5 173305754 173305889 -29779643 + AluSx SINE Alu 1 138 -174 2334 99 0 10 chr5 173305889 173306201 -29779331 + AluSc SINE Alu 1 309 0 2100 115 6 34 chr5 173306201 173306386 -29779146 + AluSx SINE Alu 138 312 0 2385 93 3 0 chr5 173306393 173306703 -29778829 + AluSp SINE Alu 1 311 -2 2122 120 10 16 chr5 173307244 173307553 -29777979 + AluSg1 SINE Alu 1 307 -2 2358 88 0 7 chr5 173307579 173307876 -29777656 + AluSg SINE Alu 5 299 -11 22 56 0 0 chr5 173307975 173308011 -29777521 + AT_rich Low_complexity Low_complexity 1 36 0 2104 130 0 26 chr5 173309087 173309394 -29776138 - AluSx SINE Alu -13 299 1 365 191 16 0 chr5 173309614 173309677 -29775855 + AluS SINE Alu 3 66 -237 995 192 0 0 chr5 173309683 173309850 -29775682 + AluJb SINE Alu 129 295 -17 1033 151 24 0 chr5 173309975 173310141 -29775391 + L1M3 LINE L1 5634 5803 -368 2155 129 38 14 chr5 173310145 173310510 -29775022 - L1M4 LINE L1 -540 5644 5271 1728 144 48 20 chr5 173311055 173311347 -29774185 - AluJb SINE Alu -12 300 1 2554 41 7 0 chr5 173311645 173311940 -29773592 - AluY SINE Alu -14 297 1 611 220 84 133 chr5 173311959 173312291 -29773241 - MER102b DNA MER1_type 0 341 26 964 179 6 0 chr5 173312525 173312687 -29772845 + FAM SINE Alu 1 163 -12 270 81 0 0 chr5 173313068 173313105 -29772427 + (CA)n Simple_repeat Simple_repeat 2 38 0 1777 120 4 0 chr5 173313637 173313878 -29771654 - AluSg SINE Alu -18 292 51 2332 85 0 0 chr5 173314121 173314414 -29771118 + AluY SINE Alu 1 293 -18 394 117 4 0 chr5 173314505 173314564 -29770968 + FLAM_A SINE Alu 71 123 -10 1305 91 11 0 chr5 173315043 173315229 -29770303 + AluSg/x SINE Alu 117 304 -6 1795 137 3 21 chr5 173316322 173316607 -29768925 + AluJb SINE Alu 9 288 -24 207 0 0 0 chr5 173316607 173316630 -29768902 + (CAT)n Simple_repeat Simple_repeat 2 24 0 587 301 40 13 chr5 173317746 173317972 -29767560 + MIR SINE MIR 4 235 -27 192 163 0 0 chr5 173318177 173318220 -29767312 + (GCTG)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr5 173318708 173318745 -29766787 + GC_rich Low_complexity Low_complexity 1 37 0 2228 88 0 16 chr5 173319963 173320268 -29765264 + AluSx SINE Alu 1 300 -12 2590 45 0 10 chr5 173320344 173320657 -29764875 - AluY SINE Alu -1 310 1 2349 75 0 13 chr5 173320948 173321253 -29764279 - AluY SINE Alu -10 301 1 557 202 0 70 chr5 173321434 173321563 -29763969 - FLAM_A SINE Alu -13 120 1 1988 86 14 0 chr5 173321632 173321934 -29763598 - AluSp SINE Alu 0 313 24 1142 112 56 0 chr5 173322138 173322317 -29763215 - MER30 DNA MER1_type -41 189 1 199 266 151 75 chr5 173322338 173322537 -29762995 - L2 LINE L2 -112 3201 2988 286 267 200 7 chr5 173322553 173322703 -29762829 + MIR SINE MIR 84 262 0 745 289 65 4 chr5 173324163 173324395 -29761137 + MIR SINE MIR 12 257 -5 347 276 201 15 chr5 173324791 173324990 -29760542 - L2 LINE L2 -8 3264 3029 230 254 222 16 chr5 173326067 173326193 -29759339 - MIR SINE MIR -2 260 109 183 270 68 54 chr5 173326323 173326397 -29759135 - MIR3 SINE MIR -5 203 129 2230 72 10 3 chr5 173326666 173326957 -29758575 - AluSq SINE Alu -20 293 1 320 225 271 8 chr5 173327361 173327490 -29758042 + MIR3 SINE MIR 35 197 -11 2127 115 3 3 chr5 173327490 173327795 -29757737 - AluSp SINE Alu -8 305 1 2044 111 3 0 chr5 173329546 173329835 -29755697 + AluSx SINE Alu 1 290 -22 2269 80 7 3 chr5 173329836 173330137 -29755395 - AluSx SINE Alu -10 302 1 510 252 86 6 chr5 173330166 173330372 -29755160 - L1MC/D LINE L1 -350 5771 5615 2039 130 3 0 chr5 173331426 173331733 -29753799 - AluSq SINE Alu -5 308 1 854 110 0 0 chr5 173331741 173331857 -29753675 - AluSg/x SINE Alu -2 308 190 1872 116 19 0 chr5 173331857 173332125 -29753407 - AluSx SINE Alu -39 273 1 1219 214 5 5 chr5 173332267 173332487 -29753045 + MER8 DNA MER2_type 20 239 0 520 270 103 32 chr5 173332489 173332674 -29752858 - MIR SINE MIR -57 205 8 191 321 0 0 chr5 173333083 173333139 -29752393 - L3 LINE CR1 -14 1563 1508 359 261 33 0 chr5 173333632 173333724 -29751808 - MLT1J LTR MaLR -40 471 377 302 278 103 24 chr5 173333898 173334024 -29751508 - MLT1J LTR MaLR -375 136 1 188 269 45 30 chr5 173334034 173334101 -29751431 - MIR SINE MIR -55 153 86 559 302 73 44 chr5 173335176 173335424 -29750108 - MIR SINE MIR -7 255 1 972 192 74 59 chr5 173336114 173336453 -29749079 - L1MC5 LINE L1 -44 7917 7574 316 250 10 52 chr5 173336456 173336552 -29748980 - L1MC4 LINE L1 -1339 6703 6612 329 310 55 69 chr5 173336556 173336830 -29748702 - L1M4 LINE L1 -3660 2486 2217 825 148 16 0 chr5 173336862 173336984 -29748548 + FLAM_C SINE Alu 2 125 -18 1325 189 117 93 chr5 173337002 173337637 -29747895 - L1MC5 LINE L1 -436 7525 6876 667 199 13 26 chr5 173337640 173337791 -29747741 - L1MC5 LINE L1 -1170 6791 6643 2377 87 3 0 chr5 173337846 173338156 -29747376 - AluSq SINE Alu -2 311 1 1529 158 30 27 chr5 173338304 173338602 -29746930 - AluJo SINE Alu -8 304 6 451 188 7 81 chr5 173338996 173339145 -29746387 - L1MC5 LINE L1 -1925 5883 5746 1218 204 118 15 chr5 173339147 173339417 -29746115 - AluJo SINE Alu -4 298 1 1980 108 4 4 chr5 173339468 173339785 -29745747 - AluSc SINE Alu 0 317 1 294 234 32 53 chr5 173341377 173341471 -29744061 + MIR SINE MIR 57 148 -60 197 344 163 44 chr5 173342087 173342430 -29743102 + L2 LINE L2 2888 3271 -1 * 267 348 110 8 chr5 173342404 173342522 -29743010 - L2 LINE L2 0 3272 3143 220 299 78 39 chr5 173342555 173342632 -29742900 - L2 LINE L2 -22 3250 3171 243 328 92 23 chr5 173344910 173345041 -29740491 + MIR SINE MIR 72 211 -51 195 311 40 0 chr5 173345635 173345709 -29739823 + MER5A DNA MER1_type 61 137 -52 1491 120 105 148 chr5 173345851 173346118 -29739414 - Tigger2 DNA MER2_type 0 2718 2472 397 164 0 0 chr5 173346118 173346179 -29739353 + L1PA15 LINE L1 6090 6156 -9 1491 120 105 148 chr5 173346179 173346311 -29739221 - Tigger2 DNA MER2_type -246 2472 2336 1009 84 22 89 chr5 173346296 173346475 -29739057 - Tigger2a DNA MER2_type -267 167 1 * 304 264 42 0 chr5 173346566 173346638 -29738894 + MIR SINE MIR 67 141 -67 730 260 109 0 chr5 173347338 173347530 -29738002 + MER58C DNA MER1_type 1 213 -2 365 267 40 0 chr5 173347741 173347842 -29737690 - L1MB7 LINE L1 -7 6177 6073 330 176 0 0 chr5 173347957 173348008 -29737524 - AluY SINE Alu -117 184 134 258 151 57 0 chr5 173348114 173348167 -29737365 + L1ME4a LINE L1 5530 5585 -536 514 249 163 48 chr5 173348239 173348604 -29736928 + L1ME4a LINE L1 5682 6096 -25 1859 65 79 4 chr5 173348604 173348883 -29736649 - AluY SINE Alu -11 300 1 514 249 163 48 chr5 173348883 173348910 -29736622 + L1ME4a LINE L1 6096 6119 -2 2054 104 3 3 chr5 173349421 173349708 -29735824 - AluSx SINE Alu -14 298 12 2018 129 0 26 chr5 173349727 173350036 -29735496 - AluSx SINE Alu -11 301 1 2028 109 10 10 chr5 173350048 173350350 -29735182 - AluSg SINE Alu -8 302 1 223 120 80 13 chr5 173350403 173350478 -29735054 + (TA)n Simple_repeat Simple_repeat 1 80 0 280 308 19 56 chr5 173350606 173350713 -29734819 - L2 LINE L2 -10 3262 3160 616 180 137 14 chr5 173351668 173351807 -29733725 + MER5B DNA MER1_type 16 171 -7 2350 66 0 3 chr5 173351959 173352263 -29733269 - AluY SINE Alu -8 303 1 1854 137 16 22 chr5 173352266 173352580 -29732952 - AluSx SINE Alu 0 312 1 1798 126 6 74 chr5 173353031 173353357 -29732175 - AluSx SINE Alu -8 304 1 285 51 0 0 chr5 173353654 173353693 -29731839 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 566 178 0 0 chr5 173353712 173353802 -29731730 - AluJ/FLAM SINE Alu -213 99 10 397 117 4 0 chr5 173354834 173354893 -29730639 - FLAM_A SINE Alu -10 123 71 2134 60 4 0 chr5 173354982 173355249 -29730283 - AluY SINE Alu -13 298 31 2048 129 0 3 chr5 173355426 173355735 -29729797 + AluSx SINE Alu 1 308 -4 1690 176 6 16 chr5 173355744 173356057 -29729475 + AluJb SINE Alu 1 310 -2 23 0 0 0 chr5 173356134 173356157 -29729375 + AT_rich Low_complexity Low_complexity 1 23 0 257 254 97 8 chr5 173356202 173356336 -29729196 - MER117 DNA MER1_type -50 147 2 407 271 90 19 chr5 173356341 173356496 -29729036 - MIR3 SINE MIR -5 203 38 31 0 0 0 chr5 173356626 173356657 -29728875 + AT_rich Low_complexity Low_complexity 1 31 0 362 219 8 12 chr5 173356667 173356765 -29728767 - AluJ/FLAM SINE Alu -227 75 14 831 136 0 57 chr5 173356766 173356906 -29728626 - FLAM_A SINE Alu -1 132 1 1734 154 0 69 chr5 173356916 173357234 -29728298 - AluJb SINE Alu -16 296 1 289 303 137 29 chr5 173357247 173357422 -29728110 + L3b LINE CR1 1201 1394 -189 2080 106 7 7 chr5 173358120 173358421 -29727111 - AluSx SINE Alu -11 301 1 2024 100 0 28 chr5 173358559 173358887 -29726645 - AluSg SINE Alu 0 320 1 2276 88 0 28 chr5 173358896 173359213 -29726319 - AluSg SINE Alu -2 308 1 667 136 7 107 chr5 173359214 173359354 -29726178 - AluJo/FLAM SINE Alu -175 127 2 265 303 40 0 chr5 173359741 173359817 -29725715 - L2 LINE L2 0 3272 3194 1318 132 184 49 chr5 173360227 173360320 -29725212 + AluJo SINE Alu 1 80 -222 1974 113 14 3 chr5 173360320 173360611 -29724921 + AluSx SINE Alu 1 294 -18 1318 132 184 49 chr5 173360611 173360783 -29724749 + AluJo SINE Alu 80 302 0 609 203 127 44 chr5 173361855 173362013 -29723519 + AluJo SINE Alu 3 173 -139 330 316 0 73 chr5 173362065 173362170 -29723362 - MIR3 SINE MIR -25 183 89 2188 77 0 58 chr5 173362170 173362482 -29723050 - AluSc SINE Alu -15 294 1 330 316 0 73 chr5 173362482 173362512 -29723020 - MIR3 SINE MIR -119 89 58 270 0 0 0 chr5 173362650 173362680 -29722852 + (TG)n Simple_repeat Simple_repeat 2 31 0 223 244 198 12 chr5 173362715 173362801 -29722731 - L2 LINE L2 -2 3270 3169 944 118 0 15 chr5 173362930 173363065 -29722467 - FLAM_C SINE Alu 0 133 1 816 152 23 0 chr5 173363143 173363275 -29722257 - AluJb SINE Alu -9 303 169 1501 185 30 7 chr5 173363340 173363637 -29721895 - AluJo SINE Alu -8 304 1 2074 105 10 13 chr5 173363855 173364168 -29721364 - AluSq SINE Alu -1 312 1 651 185 34 62 chr5 173364256 173364402 -29721130 - MER58B DNA MER1_type 0 341 200 187 247 164 27 chr5 173364526 173364599 -29720933 - MIR SINE MIR -59 203 121 277 293 89 41 chr5 173365058 173365181 -29720351 + MIR SINE MIR 20 148 -60 2637 80 2 73 chr5 173365685 173365905 -29719627 - THE1C LTR MaLR 0 375 194 2224 89 3 0 chr5 173365905 173366196 -29719336 - AluSg SINE Alu -18 292 1 2637 80 2 73 chr5 173366196 173366374 -29719158 - THE1C LTR MaLR -181 194 5 242 203 234 0 chr5 173366391 173366455 -29719077 - MIR SINE MIR -6 256 178 525 338 94 0 chr5 173366918 173367131 -29718401 + MIR SINE MIR 15 247 -15 204 40 0 0 chr5 173367747 173367772 -29717760 + (TA)n Simple_repeat Simple_repeat 2 26 0 231 284 0 0 chr5 173368233 173368307 -29717225 + A-rich Low_complexity Low_complexity 1 74 0 273 29 0 0 chr5 173369914 173369948 -29715584 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 219 294 154 0 chr5 173373975 173374118 -29711414 + MER5A DNA MER1_type 24 188 -1 502 323 0 24 chr5 173374153 173374317 -29711215 - MER5A DNA MER1_type -23 166 7 302 286 88 23 chr5 173374967 173375049 -29710483 + MIR SINE MIR 81 156 -106 1602 137 3 113 chr5 173375049 173375193 -29710339 + AluJo SINE Alu 2 90 -212 2058 109 4 4 chr5 173375193 173375468 -29710064 + AluSg SINE Alu 1 275 -35 1602 137 3 113 chr5 173375468 173375658 -29709874 + AluJo SINE Alu 90 299 -3 302 286 88 23 chr5 173375658 173375746 -29709786 + MIR SINE MIR 156 262 0 1985 149 3 10 chr5 173376396 173376697 -29708835 - AluJb SINE Alu -13 299 1 527 261 48 18 chr5 173378025 173378190 -29707342 - L2 LINE L2 0 3313 3144 1328 166 137 29 chr5 173378190 173378467 -29707065 + AluJo SINE Alu 1 307 -5 2181 110 0 14 chr5 173378468 173378760 -29706772 + AluSc SINE Alu 1 288 -21 2465 76 23 0 chr5 173378764 173379067 -29706465 + AluSg SINE Alu 1 310 0 2335 223 67 45 chr5 173379075 173379652 -29705880 - L2 LINE L2 -696 2618 2018 2358 93 6 3 chr5 173379652 173379963 -29705569 + AluSx SINE Alu 1 312 0 2335 223 67 45 chr5 173379963 173380161 -29705371 - L2 LINE L2 -1296 2018 1826 262 250 93 88 chr5 173380161 173380377 -29705155 + L1MC4 LINE L1 7803 8019 -23 2240 94 7 10 chr5 173380429 173380727 -29704805 + AluSx SINE Alu 1 297 -15 195 288 61 15 chr5 173380744 173380810 -29704722 - L2 LINE L2 -1485 1829 1761 337 136 0 17 chr5 173380816 173380828 -29704704 - Alu SINE Alu 0 302 291 369 43 0 0 chr5 173380828 173380875 -29704657 + (TG)n Simple_repeat Simple_repeat 2 48 0 337 136 0 17 chr5 173380875 173380921 -29704611 - Alu SINE Alu -11 291 245 1439 167 0 49 chr5 173381008 173381254 -29704278 - AluJo SINE Alu -78 234 1 1878 171 3 0 chr5 173381256 173381555 -29703977 - AluJo SINE Alu -12 300 1 711 195 8 0 chr5 173381566 173381694 -29703838 - FLAM_C SINE Alu -2 131 3 266 0 29 0 chr5 173381698 173381732 -29703800 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 627 262 143 76 chr5 173381734 173381997 -29703535 - L2 LINE L2 -1619 1695 1451 1825 170 0 13 chr5 173381997 173382303 -29703229 - AluJo SINE Alu -6 306 5 627 262 143 76 chr5 173382303 173382316 -29703216 - L2 LINE L2 -1863 1451 1440 1963 117 96 0 chr5 173382316 173382597 -29702935 - AluSx SINE Alu -2 310 3 627 262 143 76 chr5 173382597 173382754 -29702778 - L2 LINE L2 -1874 1440 1232 288 265 68 17 chr5 173382855 173382972 -29702560 + MIR SINE MIR 9 131 -131 240 282 48 78 chr5 173383968 173384071 -29701461 + MIR SINE MIR 23 122 -86 459 170 0 20 chr5 173384843 173384943 -29700589 - AluJ/FRAM SINE Alu 0 312 215 1816 88 0 0 chr5 173385043 173385269 -29700263 + AluSg/x SINE Alu 76 301 -9 2355 106 0 0 chr5 173385279 173385582 -29699950 + AluSx SINE Alu 1 303 -9 357 305 53 0 chr5 173385687 173385818 -29699714 + L2 LINE L2 3174 3311 -2 331 230 31 138 chr5 173387657 173387735 -29697797 - L1MC4a LINE L1 -1874 5934 5849 995 200 112 74 chr5 173387735 173387875 -29697657 + AluJo SINE Alu 1 134 -168 1866 170 3 3 chr5 173387875 173388181 -29697351 + AluJo SINE Alu 1 306 -6 995 200 112 74 chr5 173388181 173388243 -29697289 + AluJo SINE Alu 134 192 -110 2235 104 0 32 chr5 173388243 173388552 -29696980 - AluSg SINE Alu -11 299 1 995 200 112 74 chr5 173388552 173388633 -29696899 + AluJo SINE Alu 192 296 -6 331 230 31 138 chr5 173388633 173388750 -29696782 - L1MC4a LINE L1 -1959 5849 5760 1553 107 67 128 chr5 173389052 173389379 -29696153 - AluSx SINE Alu -5 307 1 2435 57 3 17 chr5 173389397 173389696 -29695836 + AluSc SINE Alu 1 295 -14 1589 165 28 31 chr5 173389696 173389987 -29695545 - AluJo SINE Alu -22 290 1 664 166 0 119 chr5 173390184 173390335 -29695197 - FLAM_C SINE Alu 0 133 1 2240 122 0 0 chr5 173390575 173390878 -29694654 - AluSx SINE Alu -9 303 1 1467 99 90 18 chr5 173390930 173391153 -29694379 - AluSc SINE Alu -8 301 63 350 290 105 46 chr5 173391272 173391662 -29693870 - L1ME LINE L1 -317 5804 5392 31427 33 2 1 chr5 173391872 173396398 -29689134 - L1PA4 LINE L1 -3 6152 1622 5583 81 1 6 chr5 173396395 173397127 -29688405 - L1PA4 LINE L1 -5417 729 1 * 1885 147 55 0 chr5 173397181 173397473 -29688059 - AluSx SINE Alu -4 308 1 294 73 0 0 chr5 173397954 173397995 -29687537 + (TG)n Simple_repeat Simple_repeat 2 42 0 210 352 19 9 chr5 173398001 173398109 -29687423 + L2 LINE L2 3160 3268 -4 2582 92 20 0 chr5 173398463 173398811 -29686721 + THE1A LTR MaLR 1 355 0 10991 98 40 3 chr5 173398811 173400334 -29685198 + THE1A-int LTR MaLR 1 1580 0 2696 80 14 0 chr5 173400334 173400684 -29684848 + THE1A LTR MaLR 1 355 0 196 30 61 0 chr5 173401202 173401235 -29684297 + T-rich Low_complexity Low_complexity 3 37 0 7067 58 44 0 chr5 173401241 173402267 -29683265 - L1PA6 LINE L1 0 6154 5119 539 110 40 30 chr5 173402367 173402467 -29683065 + MER53 DNA DNA 87 187 -2 235 337 0 0 chr5 173402973 173403059 -29682473 - L2 LINE L2 -1 3271 3186 3864 92 13 29 chr5 173403297 173403853 -29681679 - LTR10B LTR ERV1 0 547 1 2814 122 84 29 chr5 173404042 173404624 -29680908 - MER4B LTR ERV1 0 779 1 347 288 30 15 chr5 173404902 173405034 -29680498 - MIR3 SINE MIR -2 206 73 1608 163 67 49 chr5 173407172 173407888 -29677644 + LTR1B LTR ERV1 1 826 0 2401 172 79 82 chr5 173408004 173408563 -29676969 + MER68 LTR ERV1 1 557 -5 1228 148 5 0 chr5 173408920 173409116 -29676416 + MLT2B1 LTR ERVL 3 199 -321 2712 86 11 0 chr5 173409126 173409477 -29676055 + THE1A LTR MaLR 1 355 0 11277 97 30 3 chr5 173409477 173411016 -29674516 + THE1A-int LTR MaLR 1 1580 0 2672 96 3 0 chr5 173411016 173411370 -29674162 + THE1A LTR MaLR 1 355 0 2525 70 7 0 chr5 173411383 173411685 -29673847 - AluSc SINE Alu -5 304 1 448 255 31 120 chr5 173412388 173412580 -29672952 - MER5A DNA MER1_type -3 186 12 2658 32 3 7 chr5 173413290 173413598 -29671934 + AluY SINE Alu 1 307 -4 603 154 51 63 chr5 173413750 173413925 -29671607 - MER33 DNA MER1_type -5 319 147 356 137 145 0 chr5 173413946 173414063 -29671469 - MER33 DNA MER1_type -100 263 130 10452 143 15 14 chr5 173414082 173416688 -29668844 - L1MA2 LINE L1 0 7723 5113 2243 123 0 13 chr5 173416688 173417004 -29668528 - AluSx SINE Alu 0 312 1 10452 143 15 14 chr5 173417004 173417288 -29668244 - L1MA2 LINE L1 -2610 5113 4831 6271 171 26 6 chr5 173417290 173418344 -29667188 - L1MA2 LINE L1 -6469 1096 22 538 213 0 0 chr5 173418360 173418454 -29667078 - MER33 DNA MER1_type -230 94 1 657 211 64 23 chr5 173418721 173418939 -29666593 - L2 LINE L2 -7 3306 3080 336 289 33 16 chr5 173419405 173419526 -29666006 - MLT1K LTR MaLR -16 572 450 2155 131 0 6 chr5 173419555 173419869 -29665663 - AluSx SINE Alu 0 312 1 6233 100 12 77 chr5 173419939 173421055 -29664477 - L1MA3 LINE L1 0 6305 5262 505 289 33 0 chr5 173422320 173422441 -29663091 - L2 LINE L2 -1 3312 3188 425 310 127 61 chr5 173422684 173423145 -29662387 + L2 LINE L2 2730 3229 -84 1861 146 3 17 chr5 173423146 173423447 -29662085 - AluSx SINE Alu -11 301 5 212 358 0 0 chr5 173423529 173423596 -29661936 + MIR3 SINE MIR 111 177 -31 360 292 125 0 chr5 173423696 173423816 -29661716 - MIR SINE MIR -127 135 1 207 186 0 0 chr5 173424020 173424063 -29661469 + (TG)n Simple_repeat Simple_repeat 2 44 0 246 281 12 12 chr5 173424228 173424310 -29661222 - MIR3 SINE MIR -31 177 96 724 260 39 26 chr5 173424406 173424648 -29660884 - MIR SINE MIR 0 262 23 449 128 13 0 chr5 173425117 173425195 -29660337 - AluSq SINE Alu -2 311 233 1174 90 0 0 chr5 173425195 173425339 -29660193 - AluSq SINE Alu -168 144 1 368 298 48 0 chr5 173425608 173425692 -29659840 + MIR3 SINE MIR 96 183 -25 369 276 182 0 chr5 173425842 173426012 -29659520 - MIR SINE MIR -9 253 53 728 284 97 43 chr5 173426863 173426878 -29658654 + L2 LINE L2 2921 2934 -379 2303 114 0 0 chr5 173426878 173427185 -29658347 - AluSx SINE Alu -5 307 1 728 284 97 43 chr5 173427185 173427542 -29657990 + L2 LINE L2 2934 3313 0 242 233 136 19 chr5 173428582 173428685 -29656847 - MLT1J1 LTR MaLR -30 416 302 716 250 40 23 chr5 173428704 173428880 -29656652 - MLT1J2 LTR MaLR -243 207 29 1321 189 23 4 chr5 173429419 173429678 -29655854 - MER4C LTR ERV1 -201 264 1 483 310 82 40 chr5 173429678 173430007 -29655525 + L3 LINE CR1 1149 1491 -86 1147 295 28 66 chr5 173430086 173430182 -29655350 - L1MEc LINE L1 -5629 767 669 2139 148 0 0 chr5 173430182 173430493 -29655039 - AluSx SINE Alu -1 311 1 1147 295 28 66 chr5 173430493 173431170 -29654362 - L1MEc LINE L1 -5727 669 23 327 196 13 111 chr5 173431326 173431479 -29654053 - L1ME1 LINE L1 0 6184 6041 795 253 11 11 chr5 173431531 173431709 -29653823 - L1ME1 LINE L1 -102 6064 5887 2118 194 123 52 chr5 173432512 173433161 -29652371 - L1ME3A LINE L1 -1 6169 5475 207 0 0 0 chr5 173433626 173433649 -29651883 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2066 133 0 0 chr5 173433723 173434008 -29651524 + AluSx SINE Alu 1 285 -27 4668 176 113 47 chr5 173435717 173436868 -29648664 + Charlie1a DNA MER1_type 11 1237 -218 3761 227 145 59 chr5 173437004 173438520 -29647012 - L1MC4 LINE L1 -10 8032 6148 1973 139 21 95 chr5 173438520 173438909 -29646623 - MER46B DNA MER2_type -1 235 1 3761 227 145 59 chr5 173438909 173439216 -29646316 - L1MC4 LINE L1 -1894 6148 5869 29 28 0 0 chr5 173439228 173439264 -29646268 + AT_rich Low_complexity Low_complexity 1 36 0 610 213 115 22 chr5 173439329 173439512 -29646020 + MIR SINE MIR 53 252 -10 187 277 200 0 chr5 173439584 173439649 -29645883 - L2 LINE L2 -9 3263 3186 339 280 15 90 chr5 173439839 173440039 -29645493 + MIR3 SINE MIR 2 186 -22 2284 104 0 0 chr5 173440218 173440515 -29645017 + AluSg SINE Alu 1 297 -13 603 294 276 3 chr5 173440735 173441119 -29644413 + L2 LINE L2 2824 3312 -1 1250 290 85 62 chr5 173441562 173442106 -29643426 - MLT1K LTR MaLR -9 579 24 504 347 150 18 chr5 173442331 173443069 -29642463 - L2 LINE L2 -453 2861 2026 723 237 84 12 chr5 173443071 173443128 -29642404 + L1ME3 LINE L1 5724 5775 -387 2022 149 105 0 chr5 173443128 173443443 -29642089 - MER7A DNA MER2_type 0 346 1 723 237 84 12 chr5 173443443 173443634 -29641898 + L1ME3 LINE L1 5775 5990 -172 709 190 232 51 chr5 173444379 173444773 -29640759 + LTR50 LTR ERVL 101 422 -373 2289 81 0 3 chr5 173444773 173445096 -29640436 - AluSq SINE Alu 0 323 2 709 190 232 51 chr5 173445096 173445182 -29640350 + LTR50 LTR ERVL 422 795 0 1553 253 88 59 chr5 173445256 173446164 -29639368 - L1ME3 LINE L1 -227 6004 5066 3257 264 69 19 chr5 173446199 173447550 -29637982 - L1ME3 LINE L1 -1894 4321 2904 682 242 57 34 chr5 173447543 173447841 -29637691 - L1ME3 LINE L1 -3699 2516 2212 * 186 43 0 0 chr5 173447978 173448001 -29637531 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 955 175 40 72 chr5 173448040 173448291 -29637241 - L1MB8 LINE L1 -21 6157 5915 2152 110 35 0 chr5 173448302 173448592 -29636940 - AluSx SINE Alu -12 300 1 530 285 46 65 chr5 173448625 173448963 -29636569 - L1ME3 LINE L1 -4584 1812 1480 2388 100 3 0 chr5 173448963 173449274 -29636258 + AluSp SINE Alu 1 312 -1 530 285 46 65 chr5 173449274 173449303 -29636229 - L1ME3 LINE L1 -4916 1480 1452 922 199 0 23 chr5 173449688 173449864 -29635668 - FRAM SINE Alu -5 171 1 314 296 67 39 chr5 173449866 173450045 -29635487 + L2 LINE L2 3104 3287 -26 257 313 152 77 chr5 173450041 173450456 -29635076 + L2 LINE L2 2827 3272 0 * 279 321 68 37 chr5 173450611 173450773 -29634759 + MIR SINE MIR 82 248 -14 242 214 71 0 chr5 173451996 173452052 -29633480 - L2 LINE L2 0 3313 3254 330 275 0 0 chr5 173452058 173452127 -29633405 - MER2 DNA MER2_type -7 338 270 674 111 28 0 chr5 173452157 173452265 -29633267 - MER2 DNA MER2_type -139 206 96 1059 107 17 6 chr5 173452266 173452444 -29633088 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 418 107 13 13 chr5 173452444 173452459 -29633073 + (TTCC)n Simple_repeat Simple_repeat 1 15 -60 2264 118 0 6 chr5 173452459 173452773 -29632759 - AluSx SINE Alu 0 312 1 418 107 13 13 chr5 173452773 173452832 -29632700 + (TTCC)n Simple_repeat Simple_repeat 14 75 0 1759 150 0 74 chr5 173452832 173453158 -29632374 - AluJo SINE Alu -4 308 7 489 188 12 0 chr5 173453172 173453252 -29632280 - MER2 DNA MER2_type -264 81 1 2082 233 108 10 chr5 173453300 173453802 -29631730 - MLT1E LTR MaLR 0 593 43 1752 168 0 7 chr5 173454086 173454403 -29631129 + AluJb SINE Alu 1 315 0 665 241 41 12 chr5 173454445 173454615 -29630917 - MER5B DNA MER1_type -3 175 1 2298 108 3 10 chr5 173454673 173454987 -29630545 + AluSx SINE Alu 1 312 0 327 280 50 10 chr5 173455106 173455206 -29630326 + MIR3 SINE MIR 100 203 -5 198 242 32 48 chr5 173455920 173455982 -29629550 + L2 LINE L2 3204 3264 -8 351 276 103 17 chr5 173456070 173456186 -29629346 - L2 LINE L2 0 3313 3188 575 245 16 48 chr5 173456244 173456432 -29629100 - MIR SINE MIR -79 183 2 1232 140 0 0 chr5 173456680 173456851 -29628681 + AluSg/x SINE Alu 134 304 -8 1761 168 10 7 chr5 173456970 173457261 -29628271 + AluJb SINE Alu 1 292 -20 597 188 29 9 chr5 173457714 173457858 -29627674 - MIR SINE MIR -62 146 17 611 295 73 79 chr5 173458083 173458412 -29627120 + L2 LINE L2 2946 3272 0 2388 192 38 26 chr5 173458793 173459292 -29626240 + MLT1D LTR MaLR 1 505 0 419 250 0 10 chr5 173459353 173459449 -29626083 - MER117 DNA MER1_type -102 95 1 202 317 99 37 chr5 173460083 173460244 -29625288 + L2 LINE L2 2715 2885 -429 467 228 62 49 chr5 173460503 173460665 -29624867 + MIR3 SINE MIR 37 200 -8 401 336 52 68 chr5 173460877 173461201 -29624331 - L2 LINE L2 -3 3269 2951 331 318 127 0 chr5 173461595 173461721 -29623811 + MIR SINE MIR 117 258 -4 752 161 8 8 chr5 173461741 173461865 -29623667 - L2 LINE L2 -3 3310 3187 554 231 61 7 chr5 173461867 173462014 -29623518 - MIR SINE MIR -70 192 38 507 195 106 26 chr5 173462423 173462536 -29622996 - L2 LINE L2 -10 3262 3141 285 287 11 0 chr5 173463067 173463154 -29622378 + MIR3 SINE MIR 15 102 -106 2407 97 0 3 chr5 173463227 173463538 -29621994 - AluSg SINE Alu 0 310 1 1452 162 52 65 chr5 173463542 173463850 -29621682 - AluJo SINE Alu -8 304 1 398 212 0 24 chr5 173463850 173463935 -29621597 + MIR3 SINE MIR 123 205 -3 186 43 0 0 chr5 173464038 173464061 -29621471 + (TG)n Simple_repeat Simple_repeat 2 24 0 452 239 119 34 chr5 173464360 173464506 -29621026 - L2 LINE L2 0 3313 3153 714 288 86 8 chr5 173464506 173464749 -29620783 + MIR SINE MIR 1 262 0 41 36 0 0 chr5 173465217 173465272 -29620260 + AT_rich Low_complexity Low_complexity 1 55 0 1787 179 88 42 chr5 173465285 173465692 -29619840 - MER31B LTR ERV1 -40 426 1 191 264 28 14 chr5 173465895 173465967 -29619565 - MER5A DNA MER1_type 0 189 117 330 307 0 0 chr5 173466192 173466280 -29619252 + (TG)n Simple_repeat Simple_repeat 1 88 0 616 242 109 0 chr5 173467120 173467285 -29618247 + MIR SINE MIR 20 202 -60 329 321 91 5 chr5 173467287 173467474 -29618058 - MER102b DNA MER1_type -1 340 138 309 109 0 0 chr5 173468098 173468144 -29617388 + (TG)n Simple_repeat Simple_repeat 2 47 0 233 241 37 0 chr5 173468178 173468232 -29617300 + CT-rich Low_complexity Low_complexity 4 59 0 567 266 105 53 chr5 173468688 173469203 -29616329 + L2 LINE L2 2594 3181 -132 359 298 35 98 chr5 173469229 173469916 -29615616 - L1MEc LINE L1 -5516 880 237 458 249 47 47 chr5 173470239 173470452 -29615080 - L1MC4a LINE L1 -1808 6000 5788 347 172 17 0 chr5 173470452 173470510 -29615022 - MER81 DNA DNA -1 113 55 1741 293 56 24 chr5 173470538 173471770 -29613762 - L1MC4a LINE L1 -748 5398 4513 269 357 115 11 chr5 173471859 173472041 -29613491 + L2 LINE L2 3004 3204 -68 359 238 14 91 chr5 173472164 173472258 -29613274 + Charlie8 DNA MER1_type 62 143 -2274 1891 155 16 13 chr5 173472258 173472568 -29612964 + AluJb SINE Alu 1 311 -1 359 238 14 91 chr5 173472568 173472616 -29612916 + Charlie8 DNA MER1_type 143 193 -2224 1159 130 50 92 chr5 173472636 173472897 -29612635 - Tigger1 DNA MER2_type 0 2418 2169 32548 105 10 65 chr5 173472898 173473617 -29611915 - L1PA7 LINE L1 -2 6152 5395 2358 86 3 0 chr5 173473617 173473909 -29611623 - AluSc SINE Alu -16 293 1 32548 105 10 65 chr5 173473909 173475618 -29609914 - L1PA7 LINE L1 -759 5395 3594 2366 78 0 14 chr5 173475618 173475913 -29609619 - AluY SINE Alu -20 291 1 32548 105 10 65 chr5 173475913 173475974 -29609558 - L1PA7 LINE L1 -2560 3594 3531 441 0 0 0 chr5 173475974 173476023 -29609509 + (TG)n Simple_repeat Simple_repeat 2 50 0 32548 105 10 65 chr5 173476023 173480038 -29605494 - L1PA7 LINE L1 -2623 3531 12 6296 180 76 110 chr5 173480062 173480659 -29604873 - Tigger1 DNA MER2_type -236 2182 1566 2114 125 20 0 chr5 173480659 173480954 -29604578 - AluSg SINE Alu -9 301 1 1131 165 0 0 chr5 173480956 173481126 -29604406 - FAM SINE Alu -15 170 1 6296 180 76 110 chr5 173481126 173482615 -29602917 - Tigger1 DNA MER2_type -853 1565 1 282 146 0 0 chr5 173482743 173482791 -29602741 + L2 LINE L2 3266 3313 0 184 280 21 32 chr5 173482806 173482899 -29602633 - MIR SINE MIR -87 121 29 771 148 0 0 chr5 173483322 173483437 -29602095 + Tigger1 DNA MER2_type 1 115 -2303 372 309 146 34 chr5 173483532 173483949 -29601583 - L2 LINE L2 -5 3267 2804 362 171 184 13 chr5 173484256 173484332 -29601200 + FAM SINE Alu 45 133 -42 420 311 18 18 chr5 173485501 173485668 -29599864 - MIR SINE MIR -65 197 31 223 313 60 0 chr5 173485740 173485807 -29599725 - L3 LINE CR1 -112 1465 1395 234 228 0 18 chr5 173485862 173485919 -29599613 - L2 LINE L2 -3 3310 3255 262 157 20 0 chr5 173485980 173486031 -29599501 - MIR SINE MIR -130 132 81 372 208 167 0 chr5 173486607 173486703 -29598829 + MIR SINE MIR 46 157 -105 279 347 0 16 chr5 173486816 173486940 -29598592 - L2 LINE L2 -252 3061 2940 940 248 5 0 chr5 173487300 173487506 -29598026 + MER63A DNA MER1_type 1 207 -3 630 277 96 0 chr5 173487552 173487772 -29597760 - MIR SINE MIR 0 262 22 1429 254 48 14 chr5 173487819 173488236 -29597296 - L1ME3 LINE L1 -1 6161 5731 1263 182 76 20 chr5 173488348 173488780 -29596752 - MLT1D LTR MaLR 0 505 1 423 278 51 28 chr5 173488820 173488996 -29596536 + MIR3 SINE MIR 23 202 -6 681 301 77 37 chr5 173489729 173490104 -29595428 - L2 LINE L2 -4 3309 2920 1639 200 0 10 chr5 173490189 173490499 -29595033 - AluJo SINE Alu -5 307 1 327 321 29 0 chr5 173490543 173490680 -29594852 + MIR SINE MIR 120 260 -2 426 221 66 29 chr5 173491292 173491428 -29594104 + MIR3 SINE MIR 62 202 -6 285 278 65 9 chr5 173491680 173491788 -29593744 + MIR3 SINE MIR 83 196 -12 479 215 27 47 chr5 173491946 173492095 -29593437 + MIR SINE MIR 2 147 -115 665 274 127 4 chr5 173492259 173492504 -29593028 - Charlie8 DNA MER1_type -2141 276 2 524 265 16 87 chr5 173492524 173492709 -29592823 - MIR3 SINE MIR -28 180 9 2366 92 0 0 chr5 173493226 173493520 -29592012 - AluY SINE Alu -17 294 1 246 267 122 30 chr5 173494591 173494722 -29590810 + MLT1H LTR MaLR 20 162 -387 433 179 24 98 chr5 173494909 173495032 -29590500 + MLT1H LTR MaLR 436 549 0 1895 176 7 0 chr5 173495067 173495373 -29590159 + AluJo SINE Alu 1 308 -4 1016 261 14 24 chr5 173495922 173495951 -29589581 + LTR16C LTR ERVL 204 232 -259 2650 107 6 3 chr5 173495951 173496314 -29589218 + THE1B LTR MaLR 1 364 0 1016 261 14 24 chr5 173496314 173496575 -29588957 + LTR16C LTR ERVL 232 491 0 202 304 0 0 chr5 173496580 173496636 -29588896 + (TATG)n Simple_repeat Simple_repeat 3 58 0 511 273 0 0 chr5 173497058 173497190 -29588342 - L2 LINE L2 0 3313 3182 1959 113 0 0 chr5 173497250 173497563 -29587969 + AluSx SINE Alu 38 350 0 1869 147 3 60 chr5 173497728 173498047 -29587485 - AluJb SINE Alu -11 301 1 192 298 0 0 chr5 173498108 173498165 -29587367 - MIR SINE MIR -122 140 84 279 173 58 0 chr5 173498869 173498921 -29586611 - L2 LINE L2 -9 3263 3209 21 57 0 0 chr5 173499167 173499202 -29586330 + AT_rich Low_complexity Low_complexity 1 35 0 214 255 0 0 chr5 173499312 173499363 -29586169 + MIR SINE MIR 179 229 -33 2148 108 31 0 chr5 173499622 173499909 -29585623 - AluSx SINE Alu -16 296 1 1890 148 14 3 chr5 173499911 173500202 -29585330 - AluJb SINE Alu -18 294 1 242 185 15 15 chr5 173500610 173500675 -29584857 + (TA)n Simple_repeat Simple_repeat 2 66 0 240 35 0 0 chr5 173500680 173500709 -29584823 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 486 49 0 0 chr5 173500708 173500769 -29584763 + (TA)n Simple_repeat Simple_repeat 1 61 0 300 236 34 22 chr5 173501335 173501424 -29584108 + L2 LINE L2 2902 2991 -281 632 261 91 9 chr5 173501583 173501913 -29583619 + MLT1H LTR MaLR 119 549 0 1166 263 109 59 chr5 173501948 173502470 -29583062 + MLT1K LTR MaLR 41 588 0 416 273 96 35 chr5 173502541 173502739 -29582793 + MIR SINE MIR 9 218 -44 1236 219 123 96 chr5 173503210 173503773 -29581759 + MLT1K LTR MaLR 3 580 -8 198 231 39 0 chr5 173503775 173503827 -29581705 + MIR SINE MIR 106 159 -103 348 321 12 36 chr5 173504924 173505089 -29580443 - MIR SINE MIR -16 246 86 310 305 14 28 chr5 173505324 173505465 -29580067 + L3 LINE CR1 1428 1566 -11 395 281 125 5 chr5 173506391 173506583 -29578949 - MIR SINE MIR -8 254 40 2804 142 42 55 chr5 173506614 173507192 -29578340 - L1MC2 LINE L1 -10 6334 5765 230 328 0 0 chr5 173507833 173507894 -29577638 - L2 LINE L2 -4 3309 3249 496 203 187 0 chr5 173508444 173508567 -29576965 - MER5A DNA MER1_type -6 183 38 379 260 66 58 chr5 173508807 173509065 -29576467 - L2 LINE L2 0 3313 3054 1057 147 6 0 chr5 173509065 173509228 -29576304 - MLT1D LTR MaLR 0 505 342 387 296 112 15 chr5 173509356 173509552 -29575980 - MIR SINE MIR -8 254 40 299 67 0 0 chr5 173509578 173509623 -29575909 - L1MC2 LINE L1 -10 6334 6290 1508 199 104 31 chr5 173509627 173509953 -29575579 - MLT1D LTR MaLR -155 350 1 391 314 99 9 chr5 173509956 173510270 -29575262 - L2 LINE L2 -258 3055 2709 541 246 29 22 chr5 173510271 173510409 -29575123 - Charlie8 DNA MER1_type -2187 230 92 2293 82 4 0 chr5 173510421 173510740 -29574792 + AluSc SINE Alu 1 320 0 1155 127 6 0 chr5 173510740 173510905 -29574627 + AluSg/x SINE Alu 132 297 -13 548 240 60 55 chr5 173510988 173511171 -29574361 + MIR SINE MIR 63 246 -16 208 268 0 36 chr5 173511217 173511273 -29574259 + L3 LINE CR1 1518 1571 -6 248 283 30 30 chr5 173512534 173512633 -29572899 - MLT1K LTR MaLR -485 103 5 452 69 125 14 chr5 173512726 173512798 -29572734 + MADE1 DNA Mariner 1 80 0 23 0 0 0 chr5 173514276 173514299 -29571233 + AT_rich Low_complexity Low_complexity 1 23 0 186 208 0 0 chr5 173515837 173515885 -29569647 + GA-rich Low_complexity Low_complexity 2 49 0 608 302 53 9 chr5 173515897 173516122 -29569410 - MIR SINE MIR -13 249 15 462 356 27 14 chr5 173516203 173516425 -29569107 - MIR SINE MIR -15 247 23 249 333 21 0 chr5 173518279 173518375 -29567157 + MIR SINE MIR 13 110 -152 488 292 39 39 chr5 173518422 173518470 -29567062 - MLT1I LTR MaLR 0 409 362 2654 151 28 22 chr5 173518470 173518671 -29566861 + MLT1C LTR MaLR 1 199 -268 225 0 0 0 chr5 173518671 173518696 -29566836 + (CA)n Simple_repeat Simple_repeat 2 26 0 2654 151 28 22 chr5 173518696 173518958 -29566574 + MLT1C LTR MaLR 199 467 0 488 292 39 39 chr5 173518958 173519087 -29566445 - MLT1I LTR MaLR -46 363 232 1009 245 68 60 chr5 173519747 173520200 -29565332 - LTR16A1 LTR ERVL 0 457 1 349 263 148 13 chr5 173520582 173520734 -29564798 + MIR SINE MIR 14 183 -62 279 315 63 35 chr5 173521475 173521618 -29563914 - MIR3 SINE MIR -39 169 23 2312 127 0 0 chr5 173521646 173521954 -29563578 - AluSx SINE Alu -4 308 1 604 279 118 58 chr5 173521958 173522409 -29563123 + MER113 DNA MER1_type? 17 494 -27 662 283 52 0 chr5 173522467 173522658 -29562874 + MIR SINE MIR 43 243 -19 786 251 34 5 chr5 173522717 173522924 -29562608 - MER58A DNA MER1_type 0 224 12 376 250 0 0 chr5 173523225 173523305 -29562227 - MIR SINE MIR -111 151 72 602 258 141 5 chr5 173523599 173523812 -29561720 - MIR SINE MIR -1 261 20 574 290 12 18 chr5 173523953 173524122 -29561410 - MIR SINE MIR -77 185 18 601 132 33 0 chr5 173524122 173524213 -29561319 + MER94 DNA DNA 1 94 -40 308 266 148 53 chr5 173525169 173525338 -29560194 + MIR3 SINE MIR 5 189 -19 208 236 36 18 chr5 173525742 173525797 -29559735 + MIR SINE MIR 93 148 -114 438 281 70 22 chr5 173525806 173525991 -29559541 - MIR SINE MIR -7 255 62 2558 76 0 0 chr5 173525991 173526295 -29559237 + AluSx SINE Alu 1 304 -8 647 234 105 14 chr5 173526458 173526667 -29558865 + MIR SINE MIR 35 262 0 21 0 0 31 chr5 173526667 173526683 -29558849 + AT_rich Low_complexity Low_complexity 1 16 -15 2172 106 7 0 chr5 173526683 173526975 -29558557 - AluSx SINE Alu -18 294 1 21 0 0 31 chr5 173526975 173526990 -29558542 + AT_rich Low_complexity Low_complexity 16 31 0 1118 163 31 125 chr5 173527135 173527423 -29558109 + AluJo SINE Alu 22 282 -30 324 0 0 0 chr5 173527440 173527476 -29558056 + (CA)n Simple_repeat Simple_repeat 1 36 0 883 145 0 0 chr5 173527638 173527762 -29557770 - FLAM_C SINE Alu -19 124 1 240 235 0 0 chr5 173527884 173527952 -29557580 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 8178 32 7 0 chr5 173527967 173528858 -29556674 + MER11D LTR ERVK 1 897 0 453 222 50 0 chr5 173529426 173529525 -29556007 - L2 LINE L2 -1 3312 3209 385 235 143 0 chr5 173529552 173529650 -29555882 - L2 LINE L2 -508 2806 2695 696 185 15 23 chr5 173529655 173529785 -29555747 - MER5B DNA MER1_type -48 130 2 * 2914 233 142 17 chr5 173529785 173530724 -29554808 - L2 LINE L2 -625 2689 1633 337 211 47 62 chr5 173530737 173530865 -29554667 - MIR SINE MIR 0 262 137 1943 107 37 79 chr5 173530869 173531119 -29554413 - L1MA2 LINE L1 0 6304 6072 1924 139 7 3 chr5 173531119 173531406 -29554126 - AluSx SINE Alu -24 288 1 1943 107 37 79 chr5 173531406 173531509 -29554023 - L1MA2 LINE L1 -232 6072 5966 3568 74 18 2 chr5 173531554 173532002 -29553530 + LTR22A LTR ERVK 1 455 -3 1761 175 0 0 chr5 173532002 173532276 -29553256 - AluSx SINE Alu -38 274 1 925 68 0 0 chr5 173532276 173532394 -29553138 - L1MA3 LINE L1 -324 5981 5864 330 340 27 7 chr5 173532395 173532542 -29552990 - MIR SINE MIR -96 166 17 1927 204 56 31 chr5 173533046 173533493 -29552039 + MLT1C LTR MaLR 6 463 -4 2005 113 36 0 chr5 173533615 173533924 -29551608 + AluSx SINE Alu 1 319 0 479 295 0 0 chr5 173533965 173534094 -29551438 - MIR3 SINE MIR -12 196 68 386 233 12 12 chr5 173534105 173534191 -29551341 + L2 LINE L2 3228 3313 0 207 238 95 36 chr5 173534615 173534699 -29550833 - MIR SINE MIR -2 260 172 294 221 76 63 chr5 173534848 173535142 -29550390 + L1ME4a LINE L1 5631 5953 -168 201 138 0 0 chr5 173535213 173535242 -29550290 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 21 71 0 0 chr5 173535379 173535421 -29550111 + AT_rich Low_complexity Low_complexity 1 42 0 205 282 223 0 chr5 173535905 173536008 -29549524 - MIR SINE MIR -74 188 63 247 268 42 0 chr5 173536099 173536170 -29549362 - MIR3 SINE MIR -132 76 3 397 318 150 56 chr5 173536475 173536957 -29548575 + L2 LINE L2 2698 3270 -2 2046 117 55 0 chr5 173537383 173537673 -29547859 + AluSx SINE Alu 1 306 -6 1951 106 12 94 chr5 173537673 173538012 -29547520 + AluSx SINE Alu 1 311 -1 1936 267 46 68 chr5 173538266 173538640 -29546892 - L2 LINE L2 -8 3305 2924 2301 64 6 70 chr5 173538640 173538969 -29546563 - AluSc SINE Alu -1 308 1 1936 267 46 68 chr5 173538969 173539761 -29545771 - L2 LINE L2 -389 2924 2156 181 225 138 25 chr5 173540156 173540236 -29545296 + L2 LINE L2 2962 3050 -222 202 335 29 110 chr5 173540458 173540667 -29544865 + L2 LINE L2 3020 3211 -61 2100 130 36 0 chr5 173541178 173541479 -29544053 + AluSx SINE Alu 1 312 0 255 61 0 0 chr5 173541512 173541545 -29543987 + (T)n Simple_repeat Simple_repeat 1 33 0 245 266 224 10 chr5 173541715 173541907 -29543625 + L2 LINE L2 2824 3056 -257 270 299 26 0 chr5 173541940 173542017 -29543515 + L2 LINE L2 3235 3313 0 882 229 70 94 chr5 173542244 173542556 -29542976 + MLT1J LTR MaLR 3 300 -211 1901 213 62 40 chr5 173542556 173543036 -29542496 + LTR16C LTR ERVL 1 491 0 882 229 70 94 chr5 173543036 173543234 -29542298 + MLT1J LTR MaLR 300 501 -10 252 234 16 16 chr5 173543251 173543315 -29542217 + L3 LINE CR1 916 979 -598 331 323 146 0 chr5 173543382 173543512 -29542020 - MIR SINE MIR -73 189 41 1370 187 28 31 chr5 173544009 173544298 -29541234 + AluJo SINE Alu 2 289 -23 1605 159 4 15 chr5 173545926 173546196 -29539336 + AluJo SINE Alu 1 267 -45 275 333 160 7 chr5 173547717 173547861 -29537671 - MIR3 SINE MIR -23 185 20 190 325 0 77 chr5 173549834 173549951 -29535581 + L3 LINE CR1 1382 1489 -88 189 0 0 0 chr5 173551188 173551209 -29534323 + (A)n Simple_repeat Simple_repeat 1 21 0 326 250 60 0 chr5 173551427 173551511 -29534021 + MER91C DNA MER1_type 52 140 0 190 335 53 47 chr5 173551513 173551683 -29533849 - L3b LINE CR1 -260 1323 1153 882 238 22 5 chr5 173552418 173552603 -29532929 + MIR3 SINE MIR 16 203 -5 272 191 0 0 chr5 173553785 173553832 -29531700 - L2 LINE L2 -16 3256 3210 670 230 124 39 chr5 173554010 173554293 -29531239 + MER113 DNA MER1_type? 1 307 -214 207 191 24 0 chr5 173554418 173554460 -29531072 - L2 LINE L2 -1 3312 3270 184 342 56 41 chr5 173554832 173555028 -29530504 - L2 LINE L2 -2469 845 647 425 301 32 39 chr5 173555680 173555836 -29529696 + MER5A DNA MER1_type 13 167 -22 194 350 97 0 chr5 173555880 173555983 -29529549 - L3 LINE CR1 -73 1504 1392 570 294 62 9 chr5 173556011 173556243 -29529289 + MIR SINE MIR 23 262 0 225 267 12 23 chr5 173556723 173556809 -29528723 + GA-rich Low_complexity Low_complexity 5 89 0 264 164 36 18 chr5 173557508 173557563 -29527969 + MLT1K LTR MaLR 515 570 -18 29 0 0 0 chr5 173558066 173558095 -29527437 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr5 173558251 173558271 -29527261 + (TG)n Simple_repeat Simple_repeat 1 20 0 2255 82 0 4 chr5 173558271 173558552 -29526980 - AluSp SINE Alu -33 280 1 210 322 61 17 chr5 173559635 173559750 -29525782 + L2 LINE L2 2329 2448 -866 377 277 181 17 chr5 173559757 173559934 -29525598 + MIR SINE MIR 1 206 -56 356 341 39 8 chr5 173561026 173561155 -29524377 + MER5A DNA MER1_type 7 139 -50 1801 186 153 7 chr5 173561237 173561688 -29523844 + Charlie1b DNA MER1_type 7 523 0 210 207 69 35 chr5 173561835 173561893 -29523639 - MER5B DNA MER1_type -118 60 1 256 258 155 10 chr5 173562008 173562105 -29523427 + MIR3 SINE MIR 94 204 -4 897 284 239 12 chr5 173562156 173562667 -29522865 + L2 LINE L2 2686 3308 -5 416 253 247 0 chr5 173563322 173563516 -29522016 - MIR SINE MIR -19 243 2 812 133 0 55 chr5 173563969 173564097 -29521435 + FLAM_C SINE Alu 2 122 -21 257 243 40 54 chr5 173564351 173564425 -29521107 + L2 LINE L2 3200 3272 0 1347 235 29 32 chr5 173564741 173565082 -29520450 - MER102b DNA MER1_type 0 341 2 5786 162 57 14 chr5 173565611 173566795 -29518737 + L1MD2 LINE L1 5108 6349 -10 188 268 38 102 chr5 173568216 173568373 -29517159 + MIR SINE MIR 110 256 -6 459 302 150 43 chr5 173568883 173569257 -29516275 - MLT1L LTR MaLR 0 615 202 1033 222 182 20 chr5 173569551 173569935 -29515597 - Charlie7 DNA MER1_type -353 2259 1790 2395 65 10 7 chr5 173569935 173570241 -29515291 - AluY SINE Alu -4 307 1 1033 222 182 20 chr5 173570241 173570306 -29515226 - Charlie7 DNA MER1_type -822 1790 1737 12748 167 20 19 chr5 173570606 173576451 -29509081 + L1PA11 LINE L1 8 7607 -5 710 264 70 31 chr5 173576595 173576853 -29508679 - Charlie7 DNA MER1_type -2291 321 54 293 272 39 19 chr5 173576885 173576988 -29508544 + MIR3 SINE MIR 97 201 -7 289 195 26 133 chr5 173577202 173577282 -29508250 + MIR3 SINE MIR 87 174 -34 2232 102 7 0 chr5 173577282 173577628 -29507904 - AluSx SINE Alu 0 312 1 3075 66 0 0 chr5 173577638 173578004 -29507528 - L1PA5 LINE L1 0 6154 5789 289 195 26 133 chr5 173578004 173578025 -29507507 + MIR3 SINE MIR 165 187 -21 656 238 67 71 chr5 173578170 173578410 -29507122 + MIR SINE MIR 10 248 -14 492 304 98 26 chr5 173579480 173579712 -29505820 + MIR SINE MIR 17 261 -1 402 226 108 66 chr5 173580022 173580071 -29505461 - MIR3 SINE MIR -9 199 154 578 266 10 59 chr5 173580071 173580274 -29505258 - MER117 DNA MER1_type -3 194 2 402 226 108 66 chr5 173580274 173580376 -29505156 - MIR3 SINE MIR -54 154 41 539 277 32 48 chr5 173581182 173581370 -29504162 + MIR SINE MIR 76 260 -2 412 219 8 78 chr5 173581579 173581707 -29503825 - MIR3 SINE MIR -23 185 67 639 279 83 15 chr5 173581816 173582020 -29503512 + MIR SINE MIR 36 253 -9 182 301 27 14 chr5 173582301 173582374 -29503158 - L2 LINE L2 -4 3268 3195 947 301 99 36 chr5 173583261 173583785 -29501747 - MLT1K LTR MaLR -8 580 24 399 241 62 9 chr5 173583964 173584076 -29501456 - MIR3 SINE MIR -86 122 5 347 246 138 36 chr5 173584400 173584538 -29500994 + MIR3 SINE MIR 3 154 -54 282 170 0 0 chr5 173584723 173584770 -29500762 + L2 LINE L2 3267 3313 0 713 306 62 17 chr5 173585274 173585693 -29499839 - L1ME2 LINE L1 -205 5959 5522 628 271 23 63 chr5 173585911 173586132 -29499400 + MIR SINE MIR 49 260 -2 217 265 20 0 chr5 173586505 173586554 -29498978 - MIR3 SINE MIR -48 160 111 947 212 126 52 chr5 173586650 173587168 -29498364 - MLT1F LTR MaLR -1 541 52 24 0 0 0 chr5 173587403 173587427 -29498105 + AT_rich Low_complexity Low_complexity 1 24 0 297 284 170 36 chr5 173587856 173588050 -29497482 + MIR SINE MIR 14 233 -29 1063 213 93 0 chr5 173588056 173588272 -29497260 + MER46A DNA MER2_type 1 236 0 1972 204 53 91 chr5 173588664 173589310 -29496222 + MLT1E3 LTR MaLR 1 621 -3 287 315 34 62 chr5 173589410 173589588 -29495944 - MER5A DNA MER1_type 0 189 17 262 309 111 51 chr5 173589714 173589931 -29495601 - MIR SINE MIR -21 241 12 232 316 0 38 chr5 173589962 173590041 -29495491 + L2 LINE L2 3234 3309 -4 201 278 24 101 chr5 173590903 173591072 -29494460 - MIR SINE MIR -1 261 106 2328 238 101 6 chr5 173591316 173591859 -29493673 + MLT1G1 LTR MaLR 1 595 0 21 36 0 0 chr5 173591940 173591968 -29493564 + AT_rich Low_complexity Low_complexity 1 28 0 481 244 74 0 chr5 173592003 173592138 -29493394 - MIR SINE MIR -14 248 104 194 366 116 0 chr5 173592603 173592715 -29492817 - MIR SINE MIR -111 151 27 238 243 75 28 chr5 173593423 173593530 -29492002 - L2 LINE L2 -87 3226 3115 423 188 45 80 chr5 173593921 173594007 -29491525 + MIR3 SINE MIR 72 155 -53 973 193 50 6 chr5 173594007 173594188 -29491344 + MER5A DNA MER1_type 1 189 0 423 188 45 80 chr5 173594188 173594213 -29491319 + MIR3 SINE MIR 155 179 -29 5716 115 16 13 chr5 173595035 173595414 -29490118 - L1MA4A LINE L1 0 6303 5927 1917 148 3 25 chr5 173595414 173595731 -29489801 - AluJb SINE Alu -2 310 1 5716 115 16 13 chr5 173595731 173596220 -29489312 - L1MA4A LINE L1 -376 5927 5293 337 347 144 43 chr5 173596826 173597172 -29488360 + L2 LINE L2 2866 3246 -26 455 259 155 36 chr5 173597503 173597696 -29487836 - MIR SINE MIR 0 262 47 1073 269 93 29 chr5 173597976 173598429 -29487103 + L2 LINE L2 2830 3311 -2 351 291 0 77 chr5 173598504 173598578 -29486954 + MIR3 SINE MIR 87 150 -58 1074 205 71 5 chr5 173598578 173598788 -29486744 - MER58A DNA MER1_type 0 224 1 351 291 0 77 chr5 173598788 173598830 -29486702 + MIR3 SINE MIR 150 194 -14 194 331 79 24 chr5 173599236 173599363 -29486169 + L2 LINE L2 3170 3303 -10 266 318 39 84 chr5 173599641 173599795 -29485737 + MIR3 SINE MIR 22 168 -40 1181 238 189 21 chr5 173599853 173600494 -29485038 + L2 LINE L2 2588 3311 -2 363 279 82 38 chr5 173600696 173600854 -29484678 + MIR SINE MIR 72 236 -26 263 266 133 9 chr5 173601103 173601216 -29484316 + MIR3 SINE MIR 60 186 -22 621 256 108 5 chr5 173602035 173602230 -29483302 - MIR SINE MIR -13 249 35 339 25 0 0 chr5 173602310 173602350 -29483182 + (CTG)n Simple_repeat Simple_repeat 2 41 0 566 271 110 38 chr5 173602694 173602930 -29482602 - MER112 DNA MER1_type 0 260 8 196 292 77 0 chr5 173602944 173603009 -29482523 + L3 LINE CR1 1507 1576 -1 526 208 28 0 chr5 173603558 173603571 -29481961 + MER5A DNA MER1_type 4 19 -170 188 267 250 8 chr5 173603571 173603691 -29481841 - MER5A DNA MER1_type -2 187 39 399 306 80 5 chr5 173603707 173603906 -29481626 + MIR SINE MIR 22 235 -27 487 240 80 46 chr5 173604534 173604709 -29480823 - L3 LINE CR1 -35 1542 1362 710 290 68 93 chr5 173604896 173605662 -29479870 - L2 LINE L2 -2 3311 2557 2113 123 3 0 chr5 173605662 173605955 -29479577 - AluSg SINE Alu -16 294 1 710 290 68 93 chr5 173605955 173606035 -29479497 - L2 LINE L2 -756 2557 2477 512 276 96 35 chr5 173606436 173606697 -29478835 + L3 LINE CR1 1290 1566 -11 238 325 13 13 chr5 173606749 173606826 -29478706 - L2 LINE L2 -62 3210 3134 457 280 218 9 chr5 173607796 173608007 -29477525 + MIR SINE MIR 7 261 -1 21 71 0 0 chr5 173608425 173608467 -29477065 + AT_rich Low_complexity Low_complexity 1 42 0 506 278 107 19 chr5 173608810 173609026 -29476506 - MLT1L LTR MaLR -234 381 147 1165 191 6 0 chr5 173609028 173609211 -29476321 - MER5A DNA MER1_type -3 186 3 457 218 54 34 chr5 173609423 173609570 -29475962 - L1ME LINE L1 -347 5774 5625 942 245 123 11 chr5 173609909 173610284 -29475248 + MER113 DNA MER1_type? 3 419 -102 292 252 119 101 chr5 173610362 173610521 -29475011 - MER5A DNA MER1_type -26 163 2 370 201 64 57 chr5 173610538 173610682 -29474850 - L1MD3 LINE L1 0 8041 7907 22 35 0 0 chr5 173610737 173610766 -29474766 + AT_rich Low_complexity Low_complexity 1 29 0 1812 241 33 59 chr5 173610769 173611444 -29474088 - L1MC4 LINE L1 -137 7905 7249 200 300 43 29 chr5 173611471 173611541 -29473991 - L2 LINE L2 -640 2674 2604 389 283 46 17 chr5 173611778 173612151 -29473381 - L1MEc LINE L1 -3526 2554 2036 186 43 0 0 chr5 173612176 173612199 -29473333 + (CTATT)n Simple_repeat Simple_repeat 5 27 0 311 296 23 35 chr5 173612212 173612384 -29473148 - L1MEc LINE L1 -4309 1952 1783 306 277 51 0 chr5 173612553 173612690 -29472842 - L1MEc LINE L1 -4958 604 461 311 325 55 12 chr5 173613150 173613313 -29472219 - L1MEc LINE L1 -5713 357 188 820 141 41 35 chr5 173613322 173613519 -29472013 + MSTC LTR MaLR 1 189 -176 1229 198 0 0 chr5 173613623 173613835 -29471697 + AluSx SINE Alu 1 212 -100 462 88 0 0 chr5 173613836 173613893 -29471639 + AluSg/x SINE Alu 77 133 -177 2121 125 3 0 chr5 173613893 173614188 -29471344 + AluSx SINE Alu 1 296 -16 698 245 20 26 chr5 173614188 173614341 -29471191 + MLT1A1 LTR MaLR 227 365 0 291 321 29 0 chr5 173614372 173614512 -29471020 - L1MEc LINE L1 -5925 145 2 588 255 28 7 chr5 173614512 173614657 -29470875 - MIR SINE MIR -114 148 1 275 248 117 22 chr5 173614667 173614804 -29470728 - MIR SINE MIR -2 260 111 13265 67 6 3 chr5 173615547 173617278 -29468254 - L1P LINE L1 -1724 4422 2687 12722 179 59 10 chr5 173617262 173619659 -29465873 - L1PBa LINE L1 -1170 5692 3413 * 2467 81 3 0 chr5 173619659 173619968 -29465564 - AluSp SINE Alu -3 310 1 12722 179 59 10 chr5 173619968 173622843 -29462689 - L1PBa LINE L1 -3449 3413 6 751 204 139 13 chr5 173623035 173623265 -29462267 + MIR SINE MIR 2 260 -2 268 161 18 54 chr5 173624100 173624212 -29461320 - Charlie7 DNA MER1_type -65 2547 2440 467 317 142 10 chr5 173624992 173625394 -29460138 + L2 LINE L2 2590 3044 -228 263 327 101 12 chr5 173625473 173625638 -29459894 + MIR SINE MIR 23 206 -56 189 245 0 0 chr5 173625677 173625726 -29459806 + (CTA)n Simple_repeat Simple_repeat 2 50 0 367 258 17 8 chr5 173626810 173626930 -29458602 - L1MC4 LINE L1 0 8042 7922 492 194 31 0 chr5 173627354 173627452 -29458080 - MER7A DNA MER2_type -247 99 1 1173 200 72 64 chr5 173627455 173627815 -29457717 + L1ME3 LINE L1 5789 6151 -11 2555 70 0 0 chr5 173627839 173628139 -29457393 + AluSq SINE Alu 1 300 -13 401 272 80 66 chr5 173628529 173628840 -29456692 - MLT1J LTR MaLR -144 367 1 204 97 0 0 chr5 173628884 173628915 -29456617 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 262 282 185 26 chr5 173629367 173629562 -29455970 - MIR SINE MIR 0 262 37 433 253 85 47 chr5 173629902 173630239 -29455293 + L2 LINE L2 2945 3257 -56 322 264 46 0 chr5 173630306 173630393 -29455139 + MIR SINE MIR 157 247 -15 917 170 7 0 chr5 173630667 173630814 -29454718 - MER44D DNA MER2_type 0 605 586 5196 111 62 76 chr5 173630825 173631667 -29453865 - L1MA4A LINE L1 -7 6296 5490 2231 112 10 0 chr5 173631667 173631963 -29453569 - AluSx SINE Alu -13 299 1 5196 111 62 76 chr5 173631963 173632221 -29453311 - L1MA4A LINE L1 -813 5490 5230 1582 137 38 0 chr5 173632223 173632485 -29453047 - MER44D DNA MER2_type -109 596 325 655 158 0 0 chr5 173632487 173632588 -29452944 - MSTB2 LTR MaLR 0 457 357 1106 204 167 54 chr5 173632589 173632942 -29452590 - MSTB2 LTR MaLR -17 440 48 316 189 0 0 chr5 173633077 173633130 -29452402 - MER44D DNA MER2_type -652 53 1 21 36 0 0 chr5 173633202 173633230 -29452302 + AT_rich Low_complexity Low_complexity 1 28 0 3896 186 46 28 chr5 173633388 173634115 -29451417 - L1MB7 LINE L1 -29 6155 5442 2196 114 19 7 chr5 173634115 173634423 -29451109 - AluSq SINE Alu 0 313 2 3896 186 46 28 chr5 173634423 173635105 -29450427 - L1MB7 LINE L1 -742 5442 4622 29 0 0 0 chr5 173635499 173635528 -29450004 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 173637039 173637060 -29448472 + AT_rich Low_complexity Low_complexity 1 21 0 274 293 197 7 chr5 173637078 173637225 -29448307 + MIR3 SINE MIR 3 177 -31 22 0 0 0 chr5 173640041 173640063 -29445469 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr5 173641037 173641061 -29444471 + (TG)n Simple_repeat Simple_repeat 1 24 0 2249 82 4 4 chr5 173641061 173641341 -29444191 - AluSp SINE Alu -33 280 1 317 271 94 0 chr5 173643021 173643106 -29442426 + L2 LINE L2 3179 3271 -1 482 306 17 11 chr5 173643208 173643388 -29442144 - MIR3 SINE MIR -12 196 16 198 303 46 46 chr5 173643414 173643523 -29442009 - L2 LINE L2 -17 3255 3147 1437 181 89 32 chr5 173643655 173644043 -29441489 + MER66A LTR ERV1 169 478 0 310 194 129 0 chr5 173644295 173644357 -29441175 + MER66B LTR ERV1 417 486 0 565 290 34 0 chr5 173644753 173644929 -29440603 + MIR SINE MIR 56 237 -25 1058 221 4 46 chr5 173644959 173645199 -29440333 - MIR SINE MIR -32 230 1 298 261 30 67 chr5 173645239 173645373 -29440159 - MIR SINE MIR -64 144 16 1907 158 72 61 chr5 173645630 173646074 -29439458 + L1MD2 LINE L1 5703 6151 -208 25 0 0 0 chr5 173646092 173646117 -29439415 + AT_rich Low_complexity Low_complexity 1 25 0 938 155 43 0 chr5 173646266 173646427 -29439105 + L1MD2 LINE L1 6167 6334 -25 457 332 70 4 chr5 173646899 173647143 -29438389 - MIR SINE MIR -1 261 2 529 242 103 6 chr5 173647943 173648108 -29437424 + MIR SINE MIR 2 182 -80 199 206 59 59 chr5 173648284 173648352 -29437180 + MIR SINE MIR 98 165 -97 239 219 203 24 chr5 173648477 173648600 -29436932 + MIR SINE MIR 90 234 -28 234 290 72 24 chr5 173649148 173649277 -29436255 - MIR SINE MIR -22 186 51 420 247 105 31 chr5 173649526 173649688 -29435844 + MIR SINE MIR 5 178 -84 768 238 151 0 chr5 173649688 173649763 -29435769 - MER45C DNA AcHobo -631 950 888 1792 147 0 46 chr5 173649763 173650070 -29435462 + AluJb SINE Alu 5 297 -15 768 238 151 0 chr5 173650070 173650200 -29435332 - MER45C DNA AcHobo -693 888 714 834 245 30 5 chr5 173650210 173650410 -29435122 - MER45C DNA AcHobo -748 205 1 216 239 0 0 chr5 173650421 173650467 -29435065 + MIR SINE MIR 204 249 -13 248 284 11 18 chr5 173650582 173650713 -29434819 - MIR SINE MIR -67 141 25 332 211 101 29 chr5 173650894 173651102 -29434430 - L1ME4a LINE L1 -175 5946 5724 365 261 268 0 chr5 173651133 173651290 -29434242 + MIR SINE MIR 18 216 -46 197 272 86 25 chr5 173652149 173652230 -29433302 - MER5A DNA MER1_type -97 92 7 735 290 0 0 chr5 173652256 173652439 -29433093 - L3 LINE CR1 -118 1459 1277 1864 165 10 0 chr5 173652556 173652859 -29432673 - AluJb SINE Alu 0 312 7 238 259 129 17 chr5 173653020 173653136 -29432396 + MIR3 SINE MIR 11 139 -69 315 255 49 10 chr5 173653663 173653765 -29431767 + MIR SINE MIR 69 174 -88 341 263 19 66 chr5 173654437 173654629 -29430903 + MIR SINE MIR 30 212 -50 269 234 43 11 chr5 173656022 173656116 -29429416 - MIR SINE MIR -79 129 33 230 284 29 20 chr5 173656176 173656278 -29429254 - MIR SINE MIR -90 118 16 187 266 25 25 chr5 173656418 173656497 -29429035 + MIR SINE MIR 60 138 -70 361 224 182 71 chr5 173656810 173656980 -29428552 - MIR3 SINE MIR -17 191 3 243 0 0 0 chr5 173657687 173657714 -29427818 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6479 20 7 0 chr5 173657732 173658463 -29427069 - L1PA4 LINE L1 -11 6144 5409 209 330 18 9 chr5 173658595 173658704 -29426828 - L3 LINE CR1 -93 1484 1375 216 286 88 11 chr5 173658761 173658852 -29426680 + MER5A DNA MER1_type 90 187 -2 2284 106 0 13 chr5 173659002 173659305 -29426227 - AluSx SINE Alu -13 299 1 190 361 106 17 chr5 173659330 173659510 -29426022 - MIR3 SINE MIR -10 198 3 268 275 18 24 chr5 173659774 173659941 -29425591 + (CAGAGA)n Simple_repeat Simple_repeat 2 167 0 279 298 0 23 chr5 173659982 173660113 -29425419 + GA-rich Low_complexity Low_complexity 2 129 0 264 304 0 12 chr5 173660928 173661038 -29424494 - MIR SINE MIR -68 140 35 204 83 56 0 chr5 173661120 173661156 -29424376 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 241 309 146 6 chr5 173662762 173662927 -29422605 + MIR SINE MIR 20 207 -55 211 322 0 0 chr5 173663148 173663207 -29422325 + MIR SINE MIR 86 144 -118 1917 166 82 46 chr5 173663287 173663549 -29421983 + Tigger2a DNA MER2_type 5 289 -2419 2185 113 3 0 chr5 173663549 173663841 -29421691 + AluSg SINE Alu 1 293 -17 1917 166 82 46 chr5 173663841 173663993 -29421539 + Tigger2a DNA MER2_type 289 434 0 239 278 28 0 chr5 173664384 173664456 -29421076 - L3 LINE CR1 -2 1575 1502 207 308 19 37 chr5 173664507 173664614 -29420918 + MIR SINE MIR 81 185 -77 262 327 62 31 chr5 173665326 173665488 -29420044 - MER5A DNA MER1_type -4 185 19 472 302 19 6 chr5 173665613 173665767 -29419765 - MIR SINE MIR -63 145 1 473 262 17 68 chr5 173666166 173666403 -29419129 - MIR SINE MIR -30 232 8 187 263 18 18 chr5 173666398 173666455 -29419077 - MIR SINE MIR -58 150 94 * 266 255 61 0 chr5 173666697 173666795 -29418737 + L2 LINE L2 3156 3259 -13 1004 215 54 41 chr5 173667442 173667758 -29417774 - L1MB7 LINE L1 -16 6168 5849 287 216 48 57 chr5 173667759 173667891 -29417641 - MIR SINE MIR -63 145 14 1451 166 38 95 chr5 173668294 173668596 -29416936 + MLT1A1 LTR MaLR 17 335 -30 5290 60 3 3 chr5 173668596 173669261 -29416271 + L1PA8 LINE L1 5495 6159 -13 4067 32 18 8 chr5 173669261 173669750 -29415782 + L1PA4 LINE L1 5650 6155 0 1451 166 38 95 chr5 173669750 173669814 -29415718 + MLT1A1 LTR MaLR 333 363 -2 550 252 23 0 chr5 173669816 173669947 -29415585 + MIR SINE MIR 81 214 -48 423 288 54 58 chr5 173670956 173671161 -29414371 + Charlie8 DNA MER1_type 87 290 -2127 324 172 31 0 chr5 173671338 173671402 -29414130 - L2 LINE L2 -341 2973 2908 448 361 13 0 chr5 173672461 173672616 -29412916 + MIR SINE MIR 30 186 -76 270 265 75 48 chr5 173673558 173673705 -29411827 - L1MB7 LINE L1 -382 5739 5589 212 259 69 0 chr5 173674987 173675045 -29410487 - L2 LINE L2 -5 3267 3206 1403 223 141 26 chr5 173675110 173675563 -29409969 + MLT1D LTR MaLR 1 505 0 1712 184 47 37 chr5 173676314 173676694 -29408838 + MLT1B LTR MaLR 3 386 -4 397 250 77 48 chr5 173677377 173677545 -29407987 - MIR3 SINE MIR -7 201 29 386 315 144 4 chr5 173678086 173678343 -29407189 + L3b LINE CR1 1102 1394 -189 300 314 65 8 chr5 173678408 173678532 -29407000 + MIR SINE MIR 61 191 -71 1300 180 26 6 chr5 173678952 173679219 -29406313 + MER44D DNA MER2_type 18 558 -51 234 0 0 0 chr5 173679500 173679526 -29406006 + (CA)n Simple_repeat Simple_repeat 2 27 0 227 228 22 0 chr5 173679527 173679664 -29405868 + CT-rich Low_complexity Low_complexity 1 140 0 294 338 7 35 chr5 173680229 173680374 -29405158 - MIR SINE MIR -109 153 13 327 287 101 23 chr5 173680531 173680660 -29404872 + MER5A DNA MER1_type 45 183 -6 694 231 95 21 chr5 173684381 173684624 -29400908 + MIR SINE MIR 2 262 0 251 301 70 63 chr5 173685336 173685479 -29400053 + L2 LINE L2 2918 3061 -211 379 233 176 36 chr5 173685532 173685811 -29399721 - L1MEd LINE L1 -4862 1257 1018 400 247 192 11 chr5 173685914 173686096 -29399436 - L1MEd LINE L1 -5903 216 2 468 313 45 30 chr5 173686098 173686299 -29399233 + L2 LINE L2 3069 3272 0 237 211 40 92 chr5 173686470 173686605 -29398927 - MIR SINE MIR -40 222 95 203 302 52 26 chr5 173687667 173687783 -29397749 - L2 LINE L2 -468 2846 2728 439 318 98 16 chr5 173687978 173688233 -29397299 + L3 LINE CR1 1258 1533 -44 597 221 9 0 chr5 173689674 173689787 -29395745 - MER81 DNA DNA 0 114 1 316 272 0 48 chr5 173689788 173689913 -29395619 + MIR SINE MIR 113 231 -31 231 281 31 0 chr5 173690180 173690244 -29395288 + L2 LINE L2 3207 3272 0 497 274 135 42 chr5 173691439 173691612 -29393920 + Charlie8 DNA MER1_type 109 315 -2102 1068 214 8 41 chr5 173691612 173691879 -29393653 + MIR SINE MIR 5 262 0 497 274 135 42 chr5 173691879 173691964 -29393568 + Charlie8 DNA MER1_type 315 391 -2026 548 252 62 49 chr5 173693339 173693565 -29391967 - MIR SINE MIR -4 258 30 199 315 0 0 chr5 173693581 173693635 -29391897 - MIR SINE MIR -162 100 47 2190 106 10 7 chr5 173694093 173694395 -29391137 + AluSq SINE Alu 5 307 -6 210 326 107 25 chr5 173694626 173694822 -29390710 + MIR SINE MIR 20 231 -31 372 43 0 0 chr5 173695245 173695291 -29390241 + (TG)n Simple_repeat Simple_repeat 1 46 0 199 302 73 0 chr5 173695425 173695521 -29390011 + MIR SINE MIR 140 242 -20 349 346 10 0 chr5 173695673 173695777 -29389755 + L2 LINE L2 3144 3248 -24 821 279 116 25 chr5 173695824 173696308 -29389224 - L3 LINE CR1 -57 1520 993 232 138 23 35 chr5 173696310 173696397 -29389135 + (TA)n Simple_repeat Simple_repeat 1 86 0 358 267 52 0 chr5 173696727 173696838 -29388694 - MIR SINE MIR -67 141 37 213 39 0 0 chr5 173696876 173696902 -29388630 + (TTG)n Simple_repeat Simple_repeat 2 27 0 228 284 25 91 chr5 173696920 173697117 -29388415 - MIR SINE MIR -48 214 31 844 127 8 15 chr5 173698145 173698279 -29387253 + FLAM_C SINE Alu 1 133 0 356 275 23 38 chr5 173698609 173698740 -29386792 + MIR SINE MIR 129 257 -5 383 123 0 14 chr5 173699669 173699742 -29385790 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 260 155 0 17 chr5 173699743 173699801 -29385731 + GA-rich Low_complexity Low_complexity 1 57 0 192 97 0 0 chr5 173702992 173703023 -29382509 + (T)n Simple_repeat Simple_repeat 1 31 0 1154 238 106 21 chr5 173703277 173703702 -29381830 + MER113 DNA MER1_type? 54 514 -7 423 312 98 5 chr5 173705026 173705231 -29380301 - L3 LINE CR1 -35 1542 1319 23 0 0 0 chr5 173708941 173708964 -29376568 + GC_rich Low_complexity Low_complexity 1 23 0 201 243 0 0 chr5 173709311 173709348 -29376184 + polypyrimidine Low_complexity Low_complexity 3 39 0 846 339 94 15 chr5 173709775 173710359 -29375173 + L3 LINE CR1 941 1570 -7 651 305 20 20 chr5 173711590 173711705 -29373827 + MIR SINE MIR 1 115 -147 2147 120 0 0 chr5 173711705 173712030 -29373502 - AluSx SINE Alu 0 325 1 651 305 20 20 chr5 173712030 173712162 -29373370 + MIR SINE MIR 114 249 -13 2102 107 3 14 chr5 173713221 173713541 -29371991 - AluSc SINE Alu 0 309 1 224 244 24 24 chr5 173713642 173713724 -29371808 + GA-rich Low_complexity Low_complexity 1 82 0 255 289 37 52 chr5 173713788 173713923 -29371609 - MIR SINE MIR -110 152 20 429 308 21 0 chr5 173714194 173714337 -29371195 - L2 LINE L2 -3 3310 3165 757 191 71 24 chr5 173715505 173715673 -29369859 + MER5B DNA MER1_type 3 178 0 217 382 18 27 chr5 173717533 173717643 -29367889 - MIR SINE MIR -64 144 36 211 336 36 9 chr5 173717724 173717834 -29367698 - MIR3 SINE MIR -9 199 87 338 287 69 0 chr5 173721785 173721886 -29363646 - MIR SINE MIR -124 138 31 2192 131 3 6 chr5 173722777 173723089 -29362443 + AluSx SINE Alu 1 311 -1 518 162 51 152 chr5 173723269 173723466 -29362066 + MER5B DNA MER1_type 1 177 -1 396 297 164 0 chr5 173724235 173724430 -29361102 - MIR SINE MIR -6 256 30 370 329 0 47 chr5 173724478 173724648 -29360884 + MIR3 SINE MIR 13 174 -34 1286 179 5 0 chr5 173724655 173724873 -29360659 + MER20 DNA MER1_type 1 219 0 630 280 184 22 chr5 173725577 173725991 -29359541 + L2 LINE L2 2833 3313 0 396 254 48 24 chr5 173726241 173726367 -29359165 - MIR SINE MIR -22 240 112 225 275 38 76 chr5 173726610 173726663 -29358869 + MER117 DNA MER1_type 68 121 -76 2367 72 3 3 chr5 173726663 173726956 -29358576 + AluY SINE Alu 1 293 -18 225 275 38 76 chr5 173726956 173727033 -29358499 + MER117 DNA MER1_type 121 193 -4 357 243 40 98 chr5 173727445 173727618 -29357914 - MIR3 SINE MIR -23 185 23 2155 111 4 0 chr5 173728045 173728352 -29357180 + AluSg SINE Alu 1 308 0 432 343 93 43 chr5 173729079 173729499 -29356033 + MLT1K LTR MaLR 140 580 -8 345 324 103 7 chr5 173730383 173730528 -29355004 - MIR3 SINE MIR -40 168 10 363 292 88 21 chr5 173731044 173731236 -29354296 - MIR SINE MIR -26 236 32 917 201 0 17 chr5 173731293 173731467 -29354065 + FAM SINE Alu 1 171 -4 381 205 27 71 chr5 173731624 173731736 -29353796 - MIR SINE MIR -70 192 86 625 195 73 8 chr5 173732600 173732723 -29352809 + FLAM_A SINE Alu 1 131 -2 469 323 18 18 chr5 173733061 173733121 -29352411 - MIR SINE MIR -41 221 162 2261 89 27 0 chr5 173733121 173733413 -29352119 + AluY SINE Alu 1 300 -11 469 323 18 18 chr5 173733413 173733569 -29351963 - MIR SINE MIR -99 163 5 513 275 142 26 chr5 173733987 173734220 -29351312 + MIR SINE MIR 2 261 -1 278 257 21 38 chr5 173734393 173734497 -29351035 - MIR3 SINE MIR -53 155 52 1540 246 133 39 chr5 173734876 173735409 -29350123 - MLT1G LTR MaLR 0 590 8 204 299 52 0 chr5 173735635 173735732 -29349800 + L2 LINE L2 2470 2571 -743 725 271 179 14 chr5 173735744 173736252 -29349280 + L2 LINE L2 2712 3311 -2 388 263 53 26 chr5 173736401 173736515 -29349017 - MIR3 SINE MIR -7 201 85 1751 128 0 0 chr5 173737391 173737633 -29347899 - AluSx SINE Alu -13 299 58 1741 170 22 5 chr5 173738620 173738938 -29346594 + MER44D DNA MER2_type 18 609 0 331 281 87 64 chr5 173739709 173740007 -29345525 - L1ME4a LINE L1 -11 6110 5820 2201 112 3 0 chr5 173740007 173740293 -29345239 - AluSx SINE Alu -19 293 7 331 281 87 64 chr5 173740293 173740606 -29344926 - L1ME4a LINE L1 -301 5820 5485 260 198 57 94 chr5 173740834 173740940 -29344592 - L1ME4a LINE L1 -44 6077 5976 887 125 0 22 chr5 173740942 173741078 -29344454 - FLAM_C SINE Alu 0 133 1 2296 30 0 8 chr5 173741144 173741408 -29344124 + AluY SINE Alu 1 262 -49 324 172 31 0 chr5 173741582 173741646 -29343886 + L2 LINE L2 2907 2972 -341 3846 63 2 14 chr5 173742630 173743139 -29342393 - L1PA4 LINE L1 -3 6152 5650 5174 66 3 5 chr5 173743139 173743793 -29341739 - L1PA8 LINE L1 -13 6159 5495 1582 191 16 29 chr5 173743793 173744107 -29341425 - MLT1A1 LTR MaLR -55 310 1 308 329 0 0 chr5 173744111 173744190 -29341342 - MIR SINE MIR -181 81 3 1950 118 7 4 chr5 173744331 173744610 -29340922 - AluSp SINE Alu -33 280 1 7116 65 0 1 chr5 173745910 173746803 -29338729 + L1PA6 LINE L1 5257 6148 -6 3054 114 12 21 chr5 173746815 173747297 -29338235 + L1PB1 LINE L1 5674 6151 0 410 222 88 52 chr5 173747712 173747906 -29337626 - Charlie1 DNA MER1_type -6 2755 2555 600 132 103 126 chr5 173748021 173748195 -29337337 + L1MD2 LINE L1 5981 6150 -209 938 155 43 0 chr5 173748376 173748537 -29336995 + L1MD2 LINE L1 6167 6334 -25 457 332 70 4 chr5 173749009 173749253 -29336279 - MIR SINE MIR -1 261 2 533 255 142 5 chr5 173750293 173750505 -29335027 + MIR SINE MIR 21 261 -1 351 250 0 0 chr5 173750799 173750879 -29334653 + MIR SINE MIR 72 151 -111 773 256 34 5 chr5 173751180 173751387 -29334145 + MER58A DNA MER1_type 12 224 0 662 283 52 0 chr5 173751446 173751637 -29333895 - MIR SINE MIR -19 243 43 574 279 117 60 chr5 173751695 173752147 -29333385 - MER113 DNA MER1_type? -27 494 17 2330 123 0 0 chr5 173752151 173752459 -29333073 + AluSx SINE Alu 1 308 -4 281 310 70 35 chr5 173752487 173752629 -29332903 + MIR3 SINE MIR 23 169 -39 360 262 148 13 chr5 173753371 173753523 -29332009 - MIR SINE MIR -61 147 14 989 247 68 60 chr5 173753905 173754358 -29331174 + LTR16A1 LTR ERVL 1 457 0 488 292 39 39 chr5 173755018 173755147 -29330385 + MLT1I LTR MaLR 232 363 -46 2670 149 28 22 chr5 173755147 173755409 -29330123 - MLT1C LTR MaLR 0 467 199 225 0 0 0 chr5 173755409 173755434 -29330098 + (TG)n Simple_repeat Simple_repeat 2 26 0 2670 149 28 22 chr5 173755434 173755635 -29329897 - MLT1C LTR MaLR -268 199 1 488 292 39 39 chr5 173755635 173755683 -29329849 + MLT1I LTR MaLR 362 409 0 249 333 21 0 chr5 173755730 173755826 -29329706 - MIR SINE MIR -152 110 13 462 356 27 14 chr5 173757682 173757904 -29327628 + MIR SINE MIR 23 247 -15 588 307 53 9 chr5 173757985 173758210 -29327322 + MIR SINE MIR 15 249 -13 186 208 0 0 chr5 173758222 173758270 -29327262 + CT-rich Low_complexity Low_complexity 2 49 0 23 0 0 0 chr5 173759808 173759831 -29325701 + AT_rich Low_complexity Low_complexity 1 23 0 434 83 125 14 chr5 173761308 173761380 -29324152 - MADE1 DNA Mariner 0 80 1 248 283 30 30 chr5 173761473 173761572 -29323960 + MLT1K LTR MaLR 5 103 -485 208 268 0 36 chr5 173762833 173762889 -29322643 - L3 LINE CR1 -6 1571 1518 548 240 60 55 chr5 173762935 173763118 -29322414 - MIR SINE MIR -16 246 63 1155 127 6 0 chr5 173763201 173763366 -29322166 - AluSg/x SINE Alu -13 299 134 217 25 0 75 chr5 173763366 173763406 -29322126 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 2278 86 4 0 chr5 173763406 173763685 -29321847 - AluSc SINE Alu -29 280 1 541 246 29 22 chr5 173763697 173763835 -29321697 + Charlie8 DNA MER1_type 92 230 -2187 391 314 99 9 chr5 173763836 173764150 -29321382 + L2 LINE L2 2709 3055 -258 1495 203 104 31 chr5 173764153 173764479 -29321053 + MLT1D LTR MaLR 1 350 -155 299 67 0 0 chr5 173764483 173764528 -29321004 + L1MC2 LINE L1 6290 6334 -10 387 296 112 15 chr5 173764554 173764750 -29320782 + MIR SINE MIR 40 254 -8 1057 147 6 0 chr5 173764878 173765041 -29320491 + MLT1D LTR MaLR 342 505 0 379 260 66 58 chr5 173765041 173765299 -29320233 + L2 LINE L2 3054 3313 0 496 203 187 0 chr5 173765539 173765662 -29319870 + MER5A DNA MER1_type 38 183 -6 230 328 0 0 chr5 173766211 173766272 -29319260 + L2 LINE L2 3249 3309 -4 2892 150 37 42 chr5 173766913 173767486 -29318046 + L1MC2 LINE L1 5765 6334 -10 456 275 119 5 chr5 173767517 173767710 -29317822 + MIR SINE MIR 40 254 -8 310 305 14 28 chr5 173768610 173768751 -29316781 - L3 LINE CR1 -11 1566 1428 348 321 12 36 chr5 173768986 173769151 -29316381 + MIR SINE MIR 86 246 -16 198 231 39 0 chr5 173770249 173770301 -29315231 - MIR SINE MIR -103 159 106 1236 219 123 96 chr5 173770303 173770866 -29314666 - MLT1K LTR MaLR -8 580 3 405 278 96 35 chr5 173771337 173771535 -29313997 - MIR SINE MIR -44 218 9 1166 263 109 59 chr5 173771606 173772128 -29313404 - MLT1K LTR MaLR 0 588 41 378 204 43 0 chr5 173772162 173772255 -29313277 - MLT1H LTR MaLR 0 549 453 618 276 114 9 chr5 173772285 173772495 -29313037 - MLT1H LTR MaLR -199 350 119 300 236 34 22 chr5 173772654 173772743 -29312789 - L2 LINE L2 -281 2991 2902 486 49 0 0 chr5 173773315 173773376 -29312156 + (TA)n Simple_repeat Simple_repeat 1 61 0 240 35 0 0 chr5 173773375 173773404 -29312128 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 242 185 15 15 chr5 173773409 173773474 -29312058 + (TA)n Simple_repeat Simple_repeat 1 65 0 469 98 158 12 chr5 173776388 173776470 -29309062 - MER51A LTR ERV1 -540 94 1 3935 125 22 16 chr5 173776470 173777093 -29308439 - L1MC1 LINE L1 -291 6042 5416 803 115 26 0 chr5 173777093 173777206 -29308326 + MER4B LTR ERV1 495 610 0 2128 113 0 0 chr5 173777239 173777532 -29308000 + AluSg SINE Alu 3 295 -15 639 143 9 9 chr5 173777561 173777673 -29307859 - MER4A LTR ERV1 -552 112 1 414 250 0 11 chr5 173777680 173777772 -29307760 + L2 LINE L2 3223 3313 0 300 282 0 13 chr5 173777975 173778053 -29307479 + MIR SINE MIR 61 137 -71 243 313 0 30 chr5 173778113 173778180 -29307352 + MIR3 SINE MIR 135 199 -9 2053 132 82 40 chr5 173778311 173778712 -29306820 - LTR48 LTR ERV1 0 787 370 251 83 0 21 chr5 173778831 173778879 -29306653 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 804 220 127 39 chr5 173778881 173779164 -29306368 + L2 LINE L2 2676 2980 -292 2395 154 17 41 chr5 173779216 173779548 -29305984 - L1MB3 LINE L1 -31 6152 5833 1600 149 6 72 chr5 173779548 173779869 -29305663 - AluJo SINE Alu -12 300 1 2395 154 17 41 chr5 173779869 173780004 -29305528 - L1MB3 LINE L1 -350 5833 5696 612 277 178 37 chr5 173780584 173780960 -29304572 + L2 LINE L2 2829 3257 -56 1981 167 20 3 chr5 173780974 173781315 -29304217 + MER7A DNA MER2_type 2 346 0 241 233 0 0 chr5 173781484 173781527 -29304005 + L2 LINE L2 3266 3308 -5 227 259 25 37 chr5 173781918 173781999 -29303533 + MIR SINE MIR 162 241 -21 1134 273 81 42 chr5 173782081 173782561 -29302971 + L2 LINE L2 2809 3307 -6 297 144 128 119 chr5 173782879 173783022 -29302510 + MIR3 SINE MIR 12 153 -63 394 267 26 123 chr5 173783167 173783362 -29302170 + L2 LINE L2 3017 3192 -80 1764 154 10 3 chr5 173783372 173783664 -29301868 - L1MC1 LINE L1 -1 6332 6039 1648 86 32 0 chr5 173783664 173783885 -29301647 - MER51A LTR ERV1 0 634 407 249 231 50 58 chr5 173784152 173784273 -29301259 - LTR48 LTR ERV1 -438 349 230 638 143 9 9 chr5 173784280 173784385 -29301147 - MER39 LTR ERV1 -602 105 1 754 198 111 12 chr5 173784916 173785078 -29300454 + MER5B DNA MER1_type 1 178 0 985 161 0 6 chr5 173785370 173785538 -29299994 + AluSg/x SINE Alu 137 303 -9 356 292 106 31 chr5 173785756 173785917 -29299615 + MLT1K LTR MaLR 158 330 -258 1088 259 86 18 chr5 173785952 173786392 -29299140 + LTR33 LTR ERVL 46 515 -6 271 329 132 21 chr5 173787316 173787649 -29297883 + L2 LINE L2 2588 3036 -236 690 258 37 11 chr5 173787774 173787964 -29297568 - MIR SINE MIR -8 254 60 762 134 25 32 chr5 173787993 173788150 -29297382 - L1MB8 LINE L1 -5 6173 6018 246 309 37 12 chr5 173788159 173788240 -29297292 + L2 LINE L2 3231 3313 0 1486 173 47 40 chr5 173788362 173788662 -29296870 - AluJo SINE Alu 0 302 1 1172 160 30 0 chr5 173788694 173788894 -29296638 - L1M3f LINE L1 -5109 219 14 303 317 71 49 chr5 173788906 173789036 -29296496 - MIR SINE MIR -8 254 117 1700 199 80 20 chr5 173789036 173789382 -29296150 - MSTB LTR MaLR 0 426 51 2206 101 0 3 chr5 173789382 173789690 -29295842 - AluSc SINE Alu -2 307 1 1700 199 80 20 chr5 173789690 173789744 -29295788 - MSTB LTR MaLR -375 51 2 303 317 71 49 chr5 173789744 173789796 -29295736 - MIR SINE MIR -145 117 68 489 289 86 0 chr5 173789895 173790023 -29295509 - L2 LINE L2 0 3272 3134 180 274 16 16 chr5 173790088 173790150 -29295382 - MIR SINE MIR -130 78 17 1247 237 126 6 chr5 173790418 173790786 -29294746 - L1MC4a LINE L1 -610 5558 5484 423 195 0 148 chr5 173790795 173790855 -29294677 + Charlie8 DNA MER1_type 118 151 -190 396 0 0 0 chr5 173790855 173790899 -29294633 + (CA)n Simple_repeat Simple_repeat 2 45 0 423 195 0 148 chr5 173790899 173790966 -29294566 + Charlie8 DNA MER1_type 151 226 -115 207 333 78 0 chr5 173791250 173791340 -29294192 + L3b LINE CR1 1273 1369 -214 * 324 316 89 74 chr5 173791338 173791674 -29293858 - L2 LINE L2 0 3272 2932 709 216 187 137 chr5 173791679 173792203 -29293329 - MLT1K LTR MaLR -29 559 10 388 333 25 8 chr5 173792255 173792375 -29293157 - MIR SINE MIR -57 151 30 314 262 35 83 chr5 173792822 173792967 -29292565 - HAL1 LINE L1 -5 2502 2365 769 281 87 17 chr5 173792972 173793203 -29292329 - MIR SINE MIR -8 254 8 306 206 29 0 chr5 173793233 173793301 -29292231 - HAL1 LINE L1 -193 2314 2245 227 257 122 14 chr5 173793476 173793550 -29291982 + L2 LINE L2 3232 3313 0 865 286 5 113 chr5 173794007 173794405 -29291127 + L2 LINE L2 2917 3271 -1 296 296 155 21 chr5 173794701 173794843 -29290689 + MER5B DNA MER1_type 1 161 -17 2025 161 83 22 chr5 173795285 173795696 -29289836 - MER31B LTR ERV1 -30 436 1 229 326 163 0 chr5 173795802 173795894 -29289638 + L2 LINE L2 3125 3231 -41 831 213 53 0 chr5 173795985 173796154 -29289378 - MER5A DNA MER1_type 0 189 12 2123 118 3 0 chr5 173796167 173796472 -29289060 - AluSp SINE Alu -7 306 1 1403 215 103 30 chr5 173796975 173797343 -29288189 + MER115 DNA AcHobo 299 693 0 572 149 6 149 chr5 173797617 173797791 -29287741 + MER4C LTR ERV1 1 149 -316 263 292 208 0 chr5 173797864 173798018 -29287514 + MIR SINE MIR 77 262 0 388 257 29 9 chr5 173798223 173798328 -29287204 - MER5A DNA MER1_type -48 141 35 373 295 39 47 chr5 173798225 173798354 -29287178 + MER5A DNA MER1_type 62 189 0 * 535 332 84 40 chr5 173798376 173798429 -29287103 + L3 LINE CR1 1314 1363 -214 1950 125 16 0 chr5 173798429 173798443 -29287089 - AluSg SINE Alu -1 309 297 1202 90 11 0 chr5 173798443 173798620 -29286912 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1950 125 16 0 chr5 173798620 173798909 -29286623 - AluSg SINE Alu -13 297 1 535 332 84 40 chr5 173798909 173799081 -29286451 + L3 LINE CR1 1363 1549 -28 520 240 123 0 chr5 173800098 173800244 -29285288 - MIR SINE MIR -12 250 87 396 276 63 8 chr5 173800292 173800419 -29285113 + MIR SINE MIR 22 155 -107 2093 120 0 0 chr5 173800427 173800728 -29284804 + AluSx SINE Alu 12 312 0 500 202 0 0 chr5 173800770 173800854 -29284678 + MLT1D LTR MaLR 1 84 -421 201 74 0 0 chr5 173800887 173800914 -29284618 + (TAA)n Simple_repeat Simple_repeat 2 28 0 403 220 83 28 chr5 173801604 173801713 -29283819 - L2 LINE L2 0 3272 3158 475 229 0 0 chr5 173802013 173802109 -29283423 + MIR SINE MIR 49 144 -118 487 226 127 44 chr5 173802228 173802409 -29283123 + L2 LINE L2 3118 3313 0 480 187 24 0 chr5 173803172 173803295 -29282237 + CT-rich Low_complexity Low_complexity 4 129 0 194 125 167 0 chr5 173803342 173803390 -29282142 + L3 LINE CR1 1228 1283 -294 683 260 103 5 chr5 173804194 173804398 -29281134 + MIR SINE MIR 7 230 -32 911 135 6 19 chr5 173804732 173804888 -29280644 - AluSg/x SINE Alu -19 291 138 413 77 0 0 chr5 173805083 173805135 -29280397 - Alu SINE Alu -241 70 19 445 256 80 0 chr5 173805149 173805274 -29280258 + MIR SINE MIR 128 262 0 259 306 54 41 chr5 173805311 173805458 -29280074 - L2 LINE L2 -213 3059 2911 228 35 0 0 chr5 173805477 173805506 -29280026 + (CAGGG)n Simple_repeat Simple_repeat 1 29 0 319 253 84 0 chr5 173806004 173806099 -29279433 + L2 LINE L2 3160 3262 -10 438 203 176 47 chr5 173807622 173807770 -29277762 + MIR3 SINE MIR 37 203 -5 482 238 16 8 chr5 173809698 173809820 -29275712 + MIR SINE MIR 24 146 -62 301 292 100 8 chr5 173809840 173809960 -29275572 - MER117 DNA MER1_type -7 190 60 434 288 100 29 chr5 173810692 173810862 -29274670 - MIR3 SINE MIR -8 200 19 2286 91 3 3 chr5 173811054 173811363 -29274169 - AluSp SINE Alu -4 309 1 584 259 142 109 chr5 173811516 173812037 -29273495 - MLT1K LTR MaLR -14 574 37 194 278 167 11 chr5 173812170 173812260 -29273272 + MIR SINE MIR 24 127 -81 380 272 267 5 chr5 173812872 173813074 -29272458 - MIR SINE MIR 0 262 8 489 292 169 0 chr5 173813320 173813515 -29272017 + MIR SINE MIR 31 258 -4 203 327 26 53 chr5 173813786 173813899 -29271633 + L2 LINE L2 2955 3064 -208 193 247 25 86 chr5 173813919 173814000 -29271532 + MIR3 SINE MIR 104 179 -29 311 243 161 21 chr5 173814899 173815075 -29270457 + MIR SINE MIR 1 196 -63 402 289 14 2 chr5 173815078 173815203 -29270329 - MIR SINE MIR -71 137 8 332 261 0 0 chr5 173815937 173816006 -29269526 + Charlie8 DNA MER1_type 3 71 -2346 207 0 0 0 chr5 173816115 173816138 -29269394 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 285 226 131 0 chr5 173816184 173816268 -29269264 + Charlie8 DNA MER1_type 187 281 -2136 262 291 25 0 chr5 173816421 173816500 -29269032 - MIR SINE MIR -110 152 72 207 0 0 0 chr5 173816715 173816738 -29268794 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2171 118 0 0 chr5 173816789 173817095 -29268437 + AluSg SINE Alu 1 306 -4 708 308 107 4 chr5 173817545 173817779 -29267753 - MIR SINE MIR -3 259 2 295 226 16 0 chr5 173817783 173817845 -29267687 + MIR SINE MIR 89 151 -111 281 284 42 11 chr5 173818515 173818610 -29266922 - L3 LINE CR1 -54 1523 1426 226 273 34 45 chr5 173818666 173818754 -29266778 + L2 LINE L2 2985 3071 -201 968 181 40 6 chr5 173819016 173819193 -29266339 - MER58A DNA MER1_type -40 184 2 226 341 45 34 chr5 173819211 173819387 -29266145 + MIR3 SINE MIR 20 197 -11 1259 271 138 13 chr5 173819410 173820120 -29265412 + L2 LINE L2 2517 3313 0 1785 220 51 26 chr5 173820679 173821133 -29264399 + MLT1C LTR MaLR 3 467 0 194 105 26 0 chr5 173821161 173821199 -29264333 + (TG)n Simple_repeat Simple_repeat 2 40 0 208 285 191 26 chr5 173821807 173822074 -29263458 - L2 LINE L2 -386 2928 2618 465 245 0 0 chr5 173822206 173822308 -29263224 - MIR SINE MIR -34 228 127 186 282 42 28 chr5 173822527 173822598 -29262934 - MIR SINE MIR -96 112 41 221 272 79 54 chr5 173823346 173823515 -29262017 - MIR SINE MIR -2 260 23 30 0 0 0 chr5 173824957 173824987 -29260545 + AT_rich Low_complexity Low_complexity 1 30 0 361 265 31 99 chr5 173825657 173825712 -29259820 + L3 LINE CR1 1425 1482 -95 2356 64 3 10 chr5 173825712 173826023 -29259509 - AluY SINE Alu 0 311 3 361 265 31 99 chr5 173826023 173826129 -29259403 + L3 LINE CR1 1482 1575 -2 362 265 41 54 chr5 173826231 173826378 -29259154 - MIR SINE MIR -50 212 68 196 366 0 0 chr5 173827268 173827339 -29258193 - MIR SINE MIR -110 152 82 1515 172 26 8 chr5 173827344 173827611 -29257921 + AluJo SINE Alu 1 272 -40 438 242 75 8 chr5 173828122 173828242 -29257290 - MIR SINE MIR -113 149 22 2436 67 0 7 chr5 173828242 173828539 -29256993 - AluY SINE Alu -14 297 3 278 258 169 11 chr5 173829088 173829177 -29256355 - MIR SINE MIR -92 116 13 238 246 11 126 chr5 173829298 173829473 -29256059 - L2 LINE L2 -213 3059 2905 752 246 9 45 chr5 173830100 173830324 -29255208 + MIR SINE MIR 34 249 -13 2384 228 83 46 chr5 173830401 173831138 -29254394 - LTR41 LTR ERVL -6 767 4 1710 186 9 20 chr5 173831138 173831482 -29254050 - MLT1A1 LTR MaLR 0 365 26 895 214 99 15 chr5 173831514 173831776 -29253756 - MER46C DNA MER2_type -54 284 1 227 262 336 13 chr5 173831794 173832023 -29253509 + L2 LINE L2 2672 2974 -340 354 171 0 0 chr5 173832051 173832121 -29253411 + (CA)n Simple_repeat Simple_repeat 1 70 0 285 350 51 34 chr5 173832278 173832395 -29253137 + L2 LINE L2 3121 3239 -33 1351 185 86 47 chr5 173832424 173832810 -29252722 + L1MC4 LINE L1 7654 7995 0 1919 226 117 14 chr5 173833247 173833760 -29251772 - MLT1F1 LTR MaLR -1 566 1 202 286 0 14 chr5 173834278 173834348 -29251184 - MIR SINE MIR -123 139 71 493 65 0 0 chr5 173834395 173834457 -29251075 + Alu SINE Alu 2 63 -247 240 86 0 0 chr5 173837346 173837381 -29248151 + (GGGGA)n Simple_repeat Simple_repeat 4 38 0 310 287 11 0 chr5 173837563 173837650 -29247882 + MIR SINE MIR 61 148 -60 266 348 11 0 chr5 173837753 173837842 -29247690 - MER117 DNA MER1_type -11 186 97 767 165 31 0 chr5 173838102 173838229 -29247303 + FLAM_C SINE Alu 1 131 -2 382 232 79 47 chr5 173838279 173838478 -29247054 + MLT1L LTR MaLR 376 615 0 312 309 18 18 chr5 173838478 173838588 -29246944 - MER117 DNA MER1_type -87 110 1 212 79 53 0 chr5 173838693 173838731 -29246801 + A-rich Low_complexity Low_complexity 5 44 0 225 0 0 0 chr5 173839488 173839513 -29246019 + (A)n Simple_repeat Simple_repeat 1 25 0 2615 29 32 6 chr5 173839673 173839988 -29245544 - L1PA4 LINE L1 -1 6154 5832 354 320 62 16 chr5 173841117 173841361 -29244171 + L2 LINE L2 2622 2876 -438 281 305 14 99 chr5 173841434 173841726 -29243806 + L2 LINE L2 2985 3251 -21 316 238 49 67 chr5 173841769 173841933 -29243599 + MER5A DNA MER1_type 28 188 -1 258 56 0 0 chr5 173842015 173842051 -29243481 + (TC)n Simple_repeat Simple_repeat 2 37 0 243 0 0 0 chr5 173842051 173842078 -29243454 + (CA)n Simple_repeat Simple_repeat 1 27 0 373 312 188 10 chr5 173842596 173843000 -29242532 + L3 LINE CR1 1092 1567 -10 569 199 43 57 chr5 173843037 173843178 -29242354 - Charlie8 DNA MER1_type -2190 227 89 183 352 0 0 chr5 173843298 173843369 -29242163 - MIR SINE MIR -95 167 97 3691 204 55 15 chr5 173844174 173845122 -29240410 - L1ME1 LINE L1 -9 6157 5184 568 253 69 6 chr5 173845472 173845646 -29239886 - MIR SINE MIR -76 186 2 180 298 0 0 chr5 173845746 173845793 -29239739 - L2 LINE L2 -224 3048 3002 2215 123 0 0 chr5 173845847 173846148 -29239384 + AluSx SINE Alu 1 301 -11 246 212 15 30 chr5 173846785 173846851 -29238681 + (TTCA)n Simple_repeat Simple_repeat 1 65 0 349 183 38 153 chr5 173846854 173846985 -29238547 - L2 LINE L2 0 3272 3157 2258 118 0 3 chr5 173846985 173847291 -29238241 - AluSx SINE Alu -7 305 1 2468 73 0 3 chr5 173847300 173847602 -29237930 - AluY SINE Alu -10 301 1 1972 145 0 42 chr5 173847602 173847913 -29237619 - AluJo SINE Alu -14 298 1 2007 76 0 4 chr5 173848092 173848356 -29237176 + L1PA4 LINE L1 5893 6155 0 22 0 0 0 chr5 173848387 173848409 -29237123 + AT_rich Low_complexity Low_complexity 1 22 0 532 323 84 3 chr5 173848550 173848860 -29236672 - L1MEc LINE L1 -4653 1743 1409 546 222 23 23 chr5 173848863 173848887 -29236645 - L1MA10 LINE L1 0 6334 6311 3011 206 46 40 chr5 173848887 173850053 -29235479 - L1ME2 LINE L1 -16 6148 4971 2661 112 58 15 chr5 173850053 173850463 -29235069 + MSTA LTR MaLR 1 428 0 3011 206 46 40 chr5 173850463 173850608 -29234924 - L1ME2 LINE L1 -1193 4971 4828 826 286 136 56 chr5 173850605 173851246 -29234286 - L1MEc LINE L1 -5424 781 90 * 2362 80 0 17 chr5 173851656 173851956 -29233576 + AluY SINE Alu 2 296 -15 273 339 17 17 chr5 173851958 173852073 -29233459 + L2 LINE L2 3199 3313 0 298 317 32 32 chr5 173852133 173852256 -29233276 - L2 LINE L2 -9 3263 3141 204 329 59 0 chr5 173853224 173853309 -29232223 + MIR3 SINE MIR 70 159 -49 256 291 20 47 chr5 173854370 173854518 -29231014 + MIR SINE MIR 60 203 -59 581 275 203 34 chr5 173854579 173854964 -29230568 - L2 LINE L2 0 3313 2864 612 231 10 77 chr5 173855146 173855354 -29230178 + MIR SINE MIR 13 206 -56 267 254 110 34 chr5 173855887 173856005 -29229527 - L2 LINE L2 -3 3269 3143 943 181 176 0 chr5 173856165 173856381 -29229151 + MER69 DNA AcHobo 35 288 -938 522 237 53 13 chr5 173856682 173856834 -29228698 - MIR SINE MIR -9 253 96 268 265 0 15 chr5 173856866 173856934 -29228598 + MER45 DNA AcHobo 1 67 -886 317 320 17 66 chr5 173857004 173857185 -29228347 + L3 LINE CR1 1403 1574 -3 255 261 0 87 chr5 173857825 173857958 -29227574 + MIR SINE MIR 59 178 -57 195 219 24 0 chr5 173858060 173858101 -29227431 - MIR SINE MIR -111 151 110 658 336 9 5 chr5 173858318 173858541 -29226991 + MIR SINE MIR 7 230 -32 234 242 11 63 chr5 173859391 173859486 -29226046 + MIR3 SINE MIR 95 184 -24 1917 178 72 5 chr5 173859797 173860173 -29225359 - L1MC3 LINE L1 -237 7548 7148 242 430 6 6 chr5 173860206 173860364 -29225168 - L2 LINE L2 0 3272 3115 402 274 149 19 chr5 173861055 173861270 -29224262 - MIR SINE MIR -1 261 19 1386 142 117 26 chr5 173861543 173861852 -29223680 + MER1B DNA MER1_type 1 337 0 201 276 105 0 chr5 173861890 173861966 -29223566 - L2 LINE L2 -53 3219 3136 300 358 23 14 chr5 173862036 173862251 -29223281 - MIR SINE MIR -14 248 32 416 256 35 47 chr5 173862453 173862625 -29222907 + MIR SINE MIR 86 255 -7 355 277 87 44 chr5 173863028 173863234 -29222298 + MIR SINE MIR 36 250 -12 438 279 112 57 chr5 173863575 173863753 -29221779 - L1ME4a LINE L1 -31 6090 5923 393 103 29 0 chr5 173863753 173863821 -29221711 + L1MA7 LINE L1 6222 6291 0 438 279 112 57 chr5 173863821 173864080 -29221452 - L1ME4a LINE L1 -198 5923 5629 308 285 0 77 chr5 173864299 173864429 -29221103 - MIR SINE MIR -114 148 29 575 258 20 13 chr5 173865199 173865350 -29220182 + MIR SINE MIR 17 168 -94 927 269 19 0 chr5 173865687 173865943 -29219589 + MIR SINE MIR 2 262 0 408 225 29 22 chr5 173866124 173866262 -29219270 - MIR3 SINE MIR -18 190 52 799 171 0 0 chr5 173866496 173866619 -29218913 + FLAM_C SINE Alu 1 123 -10 25 31 0 0 chr5 173866619 173866651 -29218881 + AT_rich Low_complexity Low_complexity 1 32 0 197 298 24 24 chr5 173866677 173866761 -29218771 + L3 LINE CR1 1251 1334 -243 459 230 77 56 chr5 173867553 173867749 -29217783 - MIR SINE MIR -17 245 46 18524 32 2 1 chr5 173868020 173870991 -29214541 - L1PA4 LINE L1 -1 6154 3183 242 340 82 0 chr5 173871248 173871345 -29214187 + MIR SINE MIR 17 121 -87 737 169 8 0 chr5 173871396 173871526 -29214006 - MER5A DNA MER1_type -45 144 14 510 322 62 31 chr5 173872547 173872805 -29212727 - MLT1L LTR MaLR 0 615 350 233 132 0 0 chr5 173872835 173872873 -29212659 - MLT1L LTR MaLR -537 78 41 397 275 66 24 chr5 173873255 173873422 -29212110 - L1ME3A LINE L1 -7 6163 5990 782 259 97 12 chr5 173873536 173873795 -29211737 - L1MC5 LINE L1 -435 7526 7246 1055 272 21 10 chr5 173873827 173874117 -29211415 - L1MC4 LINE L1 -1063 6979 6687 344 290 59 88 chr5 173874554 173875134 -29210398 - HAL1b LINE L1 -731 617 55 206 180 16 16 chr5 173875177 173875238 -29210294 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 2615 29 32 6 chr5 173875443 173875758 -29209774 + L1PA4 LINE L1 5832 6154 -1 225 0 0 0 chr5 173875918 173875943 -29209589 + (T)n Simple_repeat Simple_repeat 1 25 0 212 79 53 0 chr5 173876700 173876738 -29208794 + T-rich Low_complexity Low_complexity 5 44 0 312 309 18 18 chr5 173876843 173876953 -29208579 + MER117 DNA MER1_type 1 110 -87 382 232 79 47 chr5 173876953 173877152 -29208380 - MLT1L LTR MaLR 0 615 376 767 165 31 0 chr5 173877202 173877329 -29208203 - FLAM_C SINE Alu -2 131 1 266 348 11 0 chr5 173877581 173877670 -29207862 + MER117 DNA MER1_type 97 186 -11 310 287 11 0 chr5 173877773 173877860 -29207672 - MIR SINE MIR -60 148 61 357 109 0 0 chr5 173878042 173878097 -29207435 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 241 124 12 0 chr5 173878116 173878192 -29207340 - L1MB7 LINE L1 -6 6178 6071 482 286 12 58 chr5 173878306 173878547 -29206985 - MER102b DNA MER1_type -9 332 103 219 154 77 26 chr5 173878636 173878714 -29206818 + (CATTT)n Simple_repeat Simple_repeat 3 84 0 255 266 56 73 chr5 173879106 173879200 -29206332 - MIR SINE MIR -39 223 133 813 148 0 30 chr5 173879200 173879335 -29206197 + FLAM_C SINE Alu 1 131 -2 255 266 56 73 chr5 173879335 173879423 -29206109 - MIR SINE MIR -129 133 45 526 193 0 0 chr5 173879655 173879743 -29205789 - MLT1K LTR MaLR -8 580 493 1149 114 0 24 chr5 173879743 173879910 -29205622 + AluSc SINE Alu 144 306 -3 21 0 0 0 chr5 173880281 173880302 -29205230 + AT_rich Low_complexity Low_complexity 1 21 0 2437 186 79 18 chr5 173881130 173881728 -29203804 - L1MC4a LINE L1 -1 7807 7174 252 319 55 0 chr5 173882073 173882164 -29203368 - L2 LINE L2 -7 3265 3170 192 312 43 32 chr5 173883455 173883548 -29201984 - MIR3 SINE MIR -11 197 104 296 335 12 56 chr5 173883948 173884109 -29201423 + L2 LINE L2 3160 3313 0 498 261 0 3 chr5 173885053 173885179 -29200353 + L1MC4 LINE L1 7482 7672 -204 4123 147 12 13 chr5 173885194 173885729 -29199803 + L1MB7 LINE L1 5478 6013 -171 2086 165 43 6 chr5 173885729 173886081 -29199451 - MLT1A1 LTR MaLR 0 365 1 4123 147 12 13 chr5 173886081 173886232 -29199300 + L1MB7 LINE L1 6013 6163 -21 2158 139 0 0 chr5 173886242 173886543 -29198989 + AluSx SINE Alu 1 301 -11 791 260 99 10 chr5 173886552 173886856 -29198676 + L1MC4 LINE L1 7707 8037 -5 328 273 124 87 chr5 173888153 173888601 -29196931 + L1ME4a LINE L1 5564 6035 -86 554 141 0 10 chr5 173888601 173888700 -29196832 - L1MD1 LINE L1 0 6242 6145 328 273 124 87 chr5 173888700 173888757 -29196775 + L1ME4a LINE L1 6035 6088 -33 1568 181 4 25 chr5 173888807 173889088 -29196444 + AluJo SINE Alu 3 277 -35 23 33 0 0 chr5 173889355 173889385 -29196147 + AT_rich Low_complexity Low_complexity 1 30 0 214 416 34 0 chr5 173889778 173889927 -29195605 + MIR3 SINE MIR 34 187 -21 879 114 0 30 chr5 173891067 173891198 -29194334 + FLAM_C SINE Alu 1 127 -16 1560 87 5 5 chr5 173891257 173891463 -29194069 - AluSc SINE Alu -70 239 34 2008 147 10 0 chr5 173892925 173893225 -29192307 + AluSx SINE Alu 1 303 -9 2136 108 3 0 chr5 173893418 173893704 -29191828 + AluSq SINE Alu 22 308 -5 438 184 104 24 chr5 173894879 173895004 -29190528 + MIR SINE MIR 120 254 -8 539 146 0 0 chr5 173895061 173895143 -29190389 - AluJo SINE Alu -20 292 211 310 154 107 141 chr5 173895806 173895955 -29189577 + L1ME4a LINE L1 5967 6110 -11 408 298 101 6 chr5 173896587 173896765 -29188767 + MIR SINE MIR 67 261 -1 185 237 40 26 chr5 173896799 173896875 -29188657 + MIR SINE MIR 63 139 -123 513 234 202 32 chr5 173896895 173897113 -29188419 + Charlie8 DNA MER1_type 1 255 -2162 305 354 8 31 chr5 173897204 173897334 -29188198 + MIR3 SINE MIR 30 156 -52 226 253 12 36 chr5 173897362 173897445 -29188087 - L2 LINE L2 -4 3268 3188 277 306 47 0 chr5 173897490 173897575 -29187957 + MER5C DNA MER1_type 36 124 -200 1862 222 149 28 chr5 173897689 173898220 -29187312 - MLT1G1 LTR MaLR 0 595 1 1903 214 167 74 chr5 173898231 173898829 -29186703 - MLT1E2 LTR MaLR 0 626 1 180 171 29 0 chr5 173898860 173898895 -29186637 + MER5C DNA MER1_type 288 323 -1 1627 207 77 75 chr5 173899232 173899753 -29185779 - MLT1H LTR MaLR -16 533 12 198 167 0 0 chr5 173900233 173900269 -29185263 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 655 189 8 0 chr5 173900576 173900703 -29184829 + MER103 DNA DNA 8 135 -31 3604 186 44 23 chr5 173900757 173901484 -29184048 - L1MB4 LINE L1 0 6180 5470 242 29 29 0 chr5 173901484 173901519 -29184013 + (TTG)n Simple_repeat Simple_repeat 2 37 0 2367 91 3 0 chr5 173901519 173901815 -29183717 - AluSq SINE Alu -16 297 1 3604 186 44 23 chr5 173901815 173901855 -29183677 - L1MB4 LINE L1 -709 5471 5396 924 144 0 46 chr5 173901864 173902017 -29183515 - AluJo SINE Alu -83 229 84 4837 101 28 1 chr5 173902069 173902772 -29182760 + L1MA5 LINE L1 5576 6297 -3 2999 228 133 7 chr5 173902782 173903705 -29181827 - L1MB4 LINE L1 -902 5244 4205 188 362 21 0 chr5 173903706 173903800 -29181732 - MIR SINE MIR -108 154 59 1041 257 92 65 chr5 173903924 173904190 -29181342 - MLT1J LTR MaLR -52 459 175 1658 232 42 3 chr5 173904190 173904569 -29180963 - MSTD LTR MaLR -2 394 1 1041 257 92 65 chr5 173904569 173904749 -29180783 - MLT1J LTR MaLR -336 175 1 200 35 35 0 chr5 173905030 173905059 -29180473 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1676 170 0 40 chr5 173905374 173905697 -29179835 + AluJo SINE Alu 1 310 -2 333 351 38 0 chr5 173906087 173906218 -29179314 + MER117 DNA MER1_type 7 142 -55 677 274 39 12 chr5 173906307 173906562 -29178970 - MIR SINE MIR 0 262 1 202 286 0 0 chr5 173907085 173907134 -29178398 + MIR SINE MIR 109 157 -105 275 331 153 11 chr5 173907832 173908191 -29177341 + L2 LINE L2 2560 2969 -345 317 270 14 0 chr5 173908398 173908472 -29177060 + L2 LINE L2 3155 3229 -43 186 133 0 0 chr5 173908508 173908538 -29176994 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 295 300 52 97 chr5 173909468 173909951 -29175581 + L2 LINE L2 2812 3272 0 282 171 0 0 chr5 173910104 173910174 -29175358 + (TG)n Simple_repeat Simple_repeat 1 70 0 315 0 0 0 chr5 173910622 173910657 -29174875 + (TG)n Simple_repeat Simple_repeat 2 36 0 181 259 107 45 chr5 173911410 173911522 -29174010 - MIR SINE MIR -25 237 119 273 293 151 0 chr5 173911621 173911727 -29173805 - L2 LINE L2 0 3313 3192 320 304 51 22 chr5 173911736 173911874 -29173658 + MIR3 SINE MIR 44 185 -23 * 408 291 0 54 chr5 173911860 173912008 -29173524 - MER5A DNA MER1_type -4 185 46 284 277 24 0 chr5 173912066 173912149 -29173383 + L2 LINE L2 3178 3262 -10 2036 123 9 63 chr5 173912305 173912622 -29172910 - AluSx SINE Alu -12 300 1 182 333 48 0 chr5 173912861 173912945 -29172587 - MIR SINE MIR -92 170 83 313 260 94 8 chr5 173912974 173913101 -29172431 + MIR3 SINE MIR 33 170 -38 618 174 174 13 chr5 173913552 173913707 -29171825 + MER5A DNA MER1_type 9 188 -1 534 191 114 100 chr5 173914019 173914239 -29171293 - MER102b DNA MER1_type -14 327 105 921 218 0 11 chr5 173914418 173914606 -29170926 - MER5A DNA MER1_type 0 189 4 180 0 0 0 chr5 173915808 173915828 -29169704 + (TA)n Simple_repeat Simple_repeat 2 21 0 939 156 122 119 chr5 173916168 173916271 -29169261 + MER33 DNA MER1_type 27 128 -2457 1616 170 25 4 chr5 173916271 173916547 -29168985 + AluJo SINE Alu 1 282 -30 939 156 122 119 chr5 173916547 173916738 -29168794 + MER33 DNA MER1_type 128 322 -2 201 286 127 48 chr5 173916783 173916909 -29168623 + L2 LINE L2 3137 3272 0 330 67 0 0 chr5 173917190 173917235 -29168297 + (TG)n Simple_repeat Simple_repeat 2 46 0 269 260 168 25 chr5 173917495 173917691 -29167841 - MIR SINE MIR 0 262 39 203 276 143 29 chr5 173917866 173917971 -29167561 + MIR SINE MIR 21 137 -71 1989 131 0 31 chr5 173918286 173918609 -29166923 - AluSx SINE Alu 0 314 1 412 300 95 21 chr5 173918730 173918973 -29166559 - MIR SINE MIR 0 262 2 344 300 173 23 chr5 173920740 173920960 -29164572 - MIR SINE MIR -8 254 2 786 216 45 0 chr5 173921021 173921197 -29164335 - MER5A DNA MER1_type -5 184 1 970 241 39 35 chr5 173921297 173921351 -29164181 - MIR SINE MIR 0 262 210 1186 155 11 0 chr5 173921351 173921538 -29163994 + MER5A DNA MER1_type 1 189 0 970 241 39 35 chr5 173921538 173921740 -29163792 - MIR SINE MIR -52 210 5 216 258 0 45 chr5 173921843 173921909 -29163623 - MIR SINE MIR -70 192 130 2057 148 0 3 chr5 173922045 173922349 -29163183 - AluJo SINE Alu -9 303 1 566 268 67 6 chr5 173922584 173922748 -29162784 + MER5B DNA MER1_type 5 178 0 240 320 40 101 chr5 173922821 173923199 -29162333 - L2 LINE L2 -1 3271 2917 680 246 146 4 chr5 173923348 173923588 -29161944 + Charlie4a DNA MER1_type 28 301 -207 693 191 0 0 chr5 173923607 173923743 -29161789 - L1MA3 LINE L1 -1 6304 6169 864 118 0 0 chr5 173923768 173923887 -29161645 - FLAM_A SINE Alu -4 138 20 573 217 60 12 chr5 173923895 173924061 -29161471 + Charlie4a DNA MER1_type 335 508 0 6727 225 74 23 chr5 173925273 173927235 -29158297 + L1MEc LINE L1 49 1910 -4305 1564 211 30 10 chr5 173927235 173927538 -29157994 + AluJo SINE Alu 3 311 -1 6727 225 74 23 chr5 173927538 173927949 -29157583 + L1MEc LINE L1 1910 2299 -3916 2217 125 0 0 chr5 173927949 173928253 -29157279 + AluSx SINE Alu 1 304 -8 6727 225 74 23 chr5 173928253 173928960 -29156572 + L1MEc LINE L1 2299 3268 -2947 857 202 21 16 chr5 173928935 173929178 -29156354 + L1MEc LINE L1 2542 2785 -3430 * 1914 246 22 4 chr5 173929178 173929541 -29155991 + L1MEc LINE L1 3276 3652 -2563 2531 58 0 35 chr5 173929541 173929854 -29155678 + AluY SINE Alu 1 302 -9 1914 246 22 4 chr5 173929854 173929994 -29155538 + L1MEc LINE L1 3652 3788 -2427 254 164 148 0 chr5 173930134 173930195 -29155337 + L1MEc LINE L1 1566 1635 -4761 313 236 67 0 chr5 173930297 173930386 -29155146 + L1MEc LINE L1 1767 1861 -4535 2045 243 85 28 chr5 173931050 173932049 -29153483 - L2 LINE L2 0 3313 2279 324 64 0 0 chr5 173932647 173932694 -29152838 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2232 90 7 14 chr5 173932696 173932985 -29152547 - AluSx SINE Alu -25 287 1 294 347 87 0 chr5 173933605 173933755 -29151777 - MIR SINE MIR -80 182 20 1988 152 3 3 chr5 173933827 173934123 -29151409 - AluSx SINE Alu -14 298 3 303 282 205 0 chr5 173934749 173934944 -29150588 - L1ME4a LINE L1 -234 5887 5653 2158 116 14 3 chr5 173935240 173935533 -29149999 + AluSx SINE Alu 1 296 -16 458 285 81 6 chr5 173936320 173936492 -29149040 - MIR SINE MIR -30 232 48 278 266 73 24 chr5 173936617 173936741 -29148791 + MIR3 SINE MIR 78 207 -1 262 200 77 0 chr5 173938132 173938197 -29147335 - MIR SINE MIR -119 143 74 358 273 39 31 chr5 173938835 173938963 -29146569 + L2 LINE L2 3144 3272 0 504 256 110 26 chr5 173939217 173939408 -29146124 - MIR SINE MIR -54 208 2 1255 220 54 22 chr5 173939919 173940233 -29145299 - MLT1K LTR MaLR -3 585 262 25 31 0 0 chr5 173940646 173940678 -29144854 + AT_rich Low_complexity Low_complexity 1 32 0 598 288 44 0 chr5 173940684 173940889 -29144643 + MIR SINE MIR 49 262 0 226 228 53 18 chr5 173940902 173941016 -29144516 - L1MC/D LINE L1 -1979 5829 5712 32 0 0 0 chr5 173941634 173941666 -29143866 + AT_rich Low_complexity Low_complexity 1 32 0 237 185 20 0 chr5 173941690 173941745 -29143787 + MIR SINE MIR 96 146 -62 226 222 14 14 chr5 173943238 173943310 -29142222 - L1MC4 LINE L1 -2 8040 7969 1612 160 19 64 chr5 173943524 173943837 -29141695 - AluJb SINE Alu -13 299 1 521 266 82 6 chr5 173944014 173944172 -29141360 - Charlie8 DNA MER1_type -2170 247 78 1610 210 112 81 chr5 173944213 173944818 -29140714 - MLT1E2 LTR MaLR 0 626 3 448 175 279 7 chr5 173945129 173945283 -29140249 - L2 LINE L2 0 3313 3118 526 130 0 0 chr5 173945307 173945384 -29140148 - MER58 DNA MER1_type -1 2419 2343 1084 189 0 0 chr5 173945423 173945598 -29139934 + AluJo SINE Alu 121 295 -17 416 181 60 24 chr5 173945598 173945681 -29139851 - MER58 DNA MER1_type -2334 86 1 306 310 77 7 chr5 173946246 173946401 -29139131 + MIR SINE MIR 8 173 -89 637 280 133 26 chr5 173946447 173946793 -29138739 + LTR16A LTR ERVL 59 441 -9 751 174 20 20 chr5 173946827 173946976 -29138556 - MER5A DNA MER1_type -1 188 40 322 233 96 34 chr5 173946849 173946995 -29138537 + MER5A DNA MER1_type 35 189 0 * 25 0 0 0 chr5 173947265 173947290 -29138242 + AT_rich Low_complexity Low_complexity 1 25 0 4404 186 40 19 chr5 173947603 173949122 -29136410 + L1MB7 LINE L1 3657 6166 -18 1379 133 14 14 chr5 173949230 173949448 -29136084 + AluJb SINE Alu 84 301 -11 2738 239 64 54 chr5 173949465 173950500 -29135032 + L1MC5 LINE L1 6637 7681 -280 2081 164 116 32 chr5 173950666 173951364 -29134168 - MER21B LTR ERV1 -2 861 19 402 139 20 129 chr5 173951386 173951487 -29134045 - MER21B LTR ERV1 -773 90 1 199 277 62 0 chr5 173952080 173952145 -29133387 - MIR SINE MIR -52 210 142 319 217 189 75 chr5 173952283 173952564 -29132968 - MLT1J LTR MaLR -112 399 87 455 226 57 8 chr5 173952641 173952765 -29132767 - MIR SINE MIR -119 143 14 453 19 0 0 chr5 173953122 173953176 -29132356 + (TG)n Simple_repeat Simple_repeat 2 55 0 296 248 120 26 chr5 173953329 173953446 -29132086 + L2 LINE L2 3136 3263 -9 764 203 10 36 chr5 173953637 173953829 -29131703 + MIR SINE MIR 58 244 -18 195 282 155 0 chr5 173954111 173954214 -29131318 - MIR SINE MIR -60 202 84 340 327 0 0 chr5 173955425 173955538 -29129994 - MIR3 SINE MIR -51 157 45 198 357 28 28 chr5 173957636 173957779 -29127753 - L2 LINE L2 -220 3052 2910 315 194 16 0 chr5 173957861 173957923 -29127609 - L1MC1 LINE L1 0 6333 6271 274 167 0 0 chr5 173957928 173957970 -29127562 + 5S rRNA rRNA 1 42 -79 5849 120 10 9 chr5 173957982 173958856 -29126676 - L1MC1 LINE L1 -106 6227 5353 365 292 77 0 chr5 173959158 173959288 -29126244 - MIR SINE MIR -105 157 18 330 333 0 18 chr5 173959881 173960049 -29125483 + (CCA)n Simple_repeat Simple_repeat 1 165 0 539 125 0 0 chr5 173962259 173962339 -29123193 + MADE1 DNA Mariner 1 80 0 273 187 0 80 chr5 173962484 173962559 -29122973 - MIR SINE MIR 0 262 194 25 51 0 0 chr5 173963138 173963177 -29122355 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 173963490 173963512 -29122020 + AT_rich Low_complexity Low_complexity 1 22 0 259 271 79 36 chr5 173964062 173964202 -29121330 + MLT1K LTR MaLR 413 558 -30 519 303 13 7 chr5 173964609 173964761 -29120771 - MER5A DNA MER1_type 0 189 37 412 311 44 11 chr5 173965266 173965449 -29120083 - MER5A DNA MER1_type 0 189 1 236 274 71 0 chr5 173965519 173965603 -29119929 - MIR SINE MIR -56 152 63 2414 96 0 13 chr5 173966423 173966735 -29118797 - AluSg SINE Alu -2 308 1 2880 123 32 4 chr5 173967387 173967851 -29117681 - L1MA9 LINE L1 -13 6299 5823 1950 137 0 35 chr5 173967854 173968168 -29117364 - AluJb SINE Alu -6 306 4 21 0 0 0 chr5 173968170 173968191 -29117341 + AT_rich Low_complexity Low_complexity 1 21 0 991 104 0 8 chr5 173968191 173968325 -29117207 - AluJb SINE Alu -179 133 1 1799 111 15 11 chr5 173968325 173968357 -29117175 - L1MA9 LINE L1 -484 5828 5798 258 32 0 0 chr5 173968357 173968388 -29117144 + (TG)n Simple_repeat Simple_repeat 1 31 0 1799 111 15 11 chr5 173968388 173968625 -29116907 - L1MA9 LINE L1 -514 5798 5558 310 208 192 0 chr5 173969042 173969167 -29116365 + MIR SINE MIR 87 235 -27 2005 141 7 0 chr5 173969595 173969879 -29115653 - AluJo SINE Alu -18 294 9 471 290 93 25 chr5 173970830 173970992 -29114540 + MIR3 SINE MIR 34 206 -2 30 0 0 0 chr5 173971326 173971356 -29114176 + AT_rich Low_complexity Low_complexity 1 30 0 180 220 17 34 chr5 173971387 173971446 -29114086 - L2 LINE L2 -335 2978 2921 2205 139 3 0 chr5 173971654 173971963 -29113569 + 7SLRNA srpRNA srpRNA 2 311 -9 908 177 149 0 chr5 173972115 173972296 -29113236 - MER3 DNA MER1_type 0 209 2 394 132 15 0 chr5 173972348 173972416 -29113116 + MER41A LTR ERV1 400 468 -86 758 254 92 53 chr5 173972580 173972803 -29112729 + L1ME4a LINE L1 5506 5746 -375 830 212 88 5 chr5 173972803 173972996 -29112536 + MER63A DNA MER1_type 1 209 -1 758 254 92 53 chr5 173972996 173973075 -29112457 + L1ME4a LINE L1 5746 5820 -301 748 181 20 7 chr5 173973086 173973235 -29112297 - MER5A DNA MER1_type 0 189 39 544 307 67 17 chr5 173973320 173973558 -29111974 - MIR SINE MIR 0 262 13 435 213 102 8 chr5 173973625 173973752 -29111780 + L1ME4a LINE L1 5981 6119 -2 345 303 25 34 chr5 173973937 173974056 -29111476 - MIR SINE MIR -67 195 78 400 269 127 25 chr5 173974127 173974324 -29111208 - MIR SINE MIR -3 259 43 667 257 22 0 chr5 173974619 173974798 -29110734 - MIR SINE MIR -21 241 59 301 277 12 0 chr5 173975794 173975877 -29109655 - L2 LINE L2 -20 3252 3169 200 300 88 0 chr5 173976152 173976232 -29109300 + L2 LINE L2 3227 3313 0 299 269 13 96 chr5 173978037 173978193 -29107339 - MIR3 SINE MIR -65 143 1 306 296 76 35 chr5 173978620 173978792 -29106740 + MIR3 SINE MIR 1 179 -29 321 164 75 0 chr5 173979595 173979662 -29105870 + L1ME4a LINE L1 5984 6055 -66 428 293 84 33 chr5 173980574 173980789 -29104743 - MIR SINE MIR 0 262 37 186 356 14 0 chr5 173980967 173981040 -29104492 - MIR SINE MIR -58 150 77 195 184 0 0 chr5 173981762 173981800 -29103732 + A-rich Low_complexity Low_complexity 1 38 0 791 293 30 38 chr5 173982092 173982393 -29103139 + L1ME4a LINE L1 5516 5815 -306 2463 94 0 3 chr5 173982393 173982702 -29102830 + AluSq SINE Alu 1 308 -5 791 293 30 38 chr5 173982702 173982904 -29102628 + L1ME4a LINE L1 5815 6017 -104 850 296 62 4 chr5 173983471 173983714 -29101818 + MIR SINE MIR 3 259 -3 704 365 22 7 chr5 173984858 173985135 -29100397 - L3 LINE CR1 -2 1575 1295 261 0 0 0 chr5 173985718 173985747 -29099785 + (A)n Simple_repeat Simple_repeat 1 29 0 198 39 0 0 chr5 173985805 173985831 -29099701 + L2 LINE L2 2923 2948 -365 1277 239 119 7 chr5 173988204 173988631 -29096901 + MER20B DNA MER1_type 309 783 0 22 0 0 0 chr5 173988659 173988681 -29096851 + AT_rich Low_complexity Low_complexity 1 22 0 331 298 36 60 chr5 173989152 173989219 -29096313 + MER5A DNA MER1_type 26 93 -96 665 207 92 72 chr5 173989219 173989470 -29096062 - MER112 DNA MER1_type 0 256 1 331 298 36 60 chr5 173989470 173989570 -29095962 + MER5A DNA MER1_type 93 189 0 2374 80 0 13 chr5 173989798 173990098 -29095434 + AluY SINE Alu 1 296 -15 835 212 50 11 chr5 173990266 173990445 -29095087 - MER5A DNA MER1_type -3 186 1 242 196 36 18 chr5 173990467 173990523 -29095009 + L2 LINE L2 3211 3267 -5 439 96 0 27 chr5 173990610 173990683 -29094849 + L1MB8 LINE L1 6108 6178 0 193 233 0 0 chr5 173990809 173990852 -29094680 + MIR3 SINE MIR 155 197 -11 344 303 43 71 chr5 173991156 173991331 -29094201 + MIR SINE MIR 15 182 -80 2201 131 0 13 chr5 173991331 173991643 -29093889 + AluSx SINE Alu 1 308 -4 344 303 43 71 chr5 173991643 173991721 -29093811 + MIR SINE MIR 182 261 -1 239 312 129 53 chr5 173992272 173992442 -29093090 + MIR SINE MIR 10 192 -70 426 283 65 85 chr5 173992471 173993068 -29092464 - L2 LINE L2 -51 3221 2652 2033 184 69 5 chr5 173993196 173993631 -29091901 - MLT1C LTR MaLR -4 463 1 234 0 0 0 chr5 173993753 173993763 -29091769 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr5 173993763 173993789 -29091743 + (TG)n Simple_repeat Simple_repeat 2 27 0 330 289 83 2 chr5 173993833 173993970 -29091562 + MIR SINE MIR 17 164 -60 945 231 52 16 chr5 173994312 173994563 -29090969 + MIR SINE MIR 3 262 0 606 239 62 58 chr5 173994679 173994938 -29090594 - LTR16C LTR ERVL -2 489 230 228 288 72 40 chr5 173995074 173995199 -29090333 - L3 LINE CR1 -72 1505 1377 338 296 37 0 chr5 173995303 173995438 -29090094 - MER117 DNA MER1_type -57 140 1 267 342 45 18 chr5 173995486 173995597 -29089935 + MIR3 SINE MIR 46 159 -49 199 244 0 0 chr5 173995872 173995913 -29089619 + MIR3 SINE MIR 165 205 -3 213 39 0 0 chr5 173996706 173996732 -29088800 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 830 153 30 0 chr5 173996732 173996857 -29088675 - AluJb SINE Alu -30 282 154 814 243 116 48 chr5 173996897 173997337 -29088195 - MER113 DNA MER1_type? -49 472 3 590 242 62 0 chr5 173997397 173997558 -29087974 - L1M4 LINE L1 -1964 4182 4012 1225 273 59 58 chr5 173997692 173998248 -29087284 - MLT1K LTR MaLR -31 557 1 193 286 0 48 chr5 173998291 173998354 -29087178 + MIR SINE MIR 100 159 -103 442 224 47 0 chr5 173998855 173998940 -29086592 - MIR3 SINE MIR -39 169 81 199 274 246 17 chr5 173999083 173999258 -29086274 - MIR SINE MIR -28 234 20 960 178 29 0 chr5 173999660 173999834 -29085698 - MER5A DNA MER1_type -10 179 1 258 32 0 0 chr5 174000543 174000574 -29084958 + (CAT)n Simple_repeat Simple_repeat 2 32 0 247 247 21 86 chr5 174000607 174000700 -29084832 - MIR SINE MIR -65 197 111 641 318 9 23 chr5 174000772 174000986 -29084546 - MIR SINE MIR -19 243 33 361 273 80 23 chr5 174001166 174001328 -29084204 - MER5B DNA MER1_type -4 174 16 459 234 83 95 chr5 174001350 174001602 -29083930 + MER112 DNA MER1_type 1 249 -11 437 269 88 56 chr5 174001905 174002121 -29083411 - L3 LINE CR1 -2 1575 1353 336 320 70 35 chr5 174002342 174002514 -29083018 - MIR SINE MIR -38 224 47 410 272 99 0 chr5 174003156 174003318 -29082214 - MIR SINE MIR 0 262 85 251 198 125 31 chr5 174003456 174003552 -29081980 - MIR3 SINE MIR 0 208 104 2315 149 17 94 chr5 174003735 174004265 -29081267 - MLT1D LTR MaLR 0 505 17 205 265 36 12 chr5 174004422 174004505 -29081027 - L2 LINE L2 -337 2935 2851 265 257 162 29 chr5 174004816 174004921 -29080611 - MIR SINE MIR -61 147 32 187 221 338 0 chr5 174005027 174005095 -29080437 - MIR SINE MIR -107 155 65 187 180 50 170 chr5 174005110 174005165 -29080367 + MIR3 SINE MIR 113 152 -56 688 243 53 0 chr5 174005165 174005334 -29080198 + MER5B DNA MER1_type 1 178 0 187 180 50 170 chr5 174005334 174005378 -29080154 + MIR3 SINE MIR 152 200 -8 192 308 126 42 chr5 174005518 174005661 -29079871 + MIR SINE MIR 1 155 -107 2714 109 5 8 chr5 174006079 174006455 -29079077 - THE1C LTR MaLR 0 375 1 203 273 21 97 chr5 174006464 174006529 -29079003 - MIR SINE MIR -58 150 127 1345 191 90 7 chr5 174006529 174006828 -29078704 - MER33 DNA MER1_type 0 324 1 203 273 21 97 chr5 174006828 174006920 -29078612 - MIR SINE MIR -81 127 30 631 324 54 12 chr5 174006966 174007207 -29078325 + MIR SINE MIR 2 252 -10 294 294 18 34 chr5 174008051 174008184 -29077348 - MER5A DNA MER1_type -41 148 8 794 292 9 5 chr5 174009138 174009354 -29076178 + MIR SINE MIR 46 262 0 622 261 24 39 chr5 174009738 174009945 -29075587 + MIR SINE MIR 9 212 -50 2177 111 47 0 chr5 174010120 174010417 -29075115 - AluSq SINE Alu -2 311 1 597 294 90 20 chr5 174010632 174010833 -29074699 - MIR SINE MIR -37 225 11 610 146 0 19 chr5 174011033 174011136 -29074396 + FLAM_C SINE Alu 42 142 -1 344 164 0 14 chr5 174011136 174011209 -29074323 + GA-rich Low_complexity Low_complexity 1 72 0 393 232 9 36 chr5 174011213 174011325 -29074207 + MER117 DNA MER1_type 9 117 -80 41 78 0 0 chr5 174011432 174011522 -29074010 + AT_rich Low_complexity Low_complexity 1 90 0 1723 122 0 0 chr5 174011600 174011829 -29073703 + AluSg/x SINE Alu 74 302 -8 30 89 0 0 chr5 174011956 174012035 -29073497 + AT_rich Low_complexity Low_complexity 1 79 0 2859 160 69 2 chr5 174012350 174012830 -29072702 + LTR64 LTR ERVK 2 513 0 659 260 74 41 chr5 174013848 174014314 -29071218 - MLT1K LTR MaLR 0 588 2 200 244 189 22 chr5 174014363 174014453 -29071079 + L2 LINE L2 2921 3025 -247 230 267 178 11 chr5 174014503 174014593 -29070939 + L2 LINE L2 3155 3259 -13 385 334 117 2 chr5 174015020 174015262 -29070270 + L1ME LINE L1 5540 5747 -374 189 0 0 0 chr5 174015283 174015304 -29070228 + (A)n Simple_repeat Simple_repeat 1 21 0 1762 175 0 3 chr5 174015308 174015599 -29069933 - AluJo SINE Alu -22 290 1 1698 185 3 35 chr5 174015776 174016095 -29069437 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr5 174016542 174016563 -29068969 + AT_rich Low_complexity Low_complexity 1 21 0 268 282 18 18 chr5 174016679 174016789 -29068743 - MIR3 SINE MIR -88 120 11 371 345 55 0 chr5 174017331 174017476 -29068056 + MIR SINE MIR 107 259 -3 583 286 69 12 chr5 174017502 174017747 -29067785 + MIR SINE MIR 2 260 -2 884 209 28 0 chr5 174018021 174018203 -29067329 + MER5A DNA MER1_type 1 187 -2 273 29 0 0 chr5 174018423 174018457 -29067075 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 387 212 85 109 chr5 174018777 174018942 -29066590 + MIR SINE MIR 47 207 -55 2309 105 0 0 chr5 174019070 174019366 -29066166 + AluSx SINE Alu 1 296 -16 484 236 185 6 chr5 174019654 174019832 -29065700 - MIR SINE MIR -47 215 6 190 351 108 0 chr5 174021028 174021102 -29064430 + MIR SINE MIR 65 146 -62 405 340 115 0 chr5 174021193 174021402 -29064130 - MIR SINE MIR -3 259 27 320 346 10 0 chr5 174021937 174022041 -29063491 - L2 LINE L2 -23 3249 3145 1732 182 20 3 chr5 174022086 174022383 -29063149 + AluJo SINE Alu 1 302 -10 316 254 99 28 chr5 174022446 174022588 -29062944 - MLT1K LTR MaLR -107 481 330 233 214 71 0 chr5 174022929 174022999 -29062533 - L2 LINE L2 -222 3050 2976 524 295 159 11 chr5 174024173 174024630 -29060902 + L2 LINE L2 2527 3055 -258 1621 231 88 18 chr5 174024728 174025225 -29060307 - MLT1F LTR MaLR -2 540 9 505 254 170 6 chr5 174025255 174025420 -29060112 - MIR SINE MIR -25 237 46 272 249 10 15 chr5 174025410 174025499 -29060033 - MIR SINE MIR -81 127 40 * 269 244 37 12 chr5 174025839 174025921 -29059611 - MER117 DNA MER1_type -53 144 61 738 269 67 13 chr5 174025921 174026159 -29059373 + MIR SINE MIR 12 262 0 357 352 28 0 chr5 174026592 174026734 -29058798 + MIR SINE MIR 54 199 -63 1098 140 30 0 chr5 174027912 174028076 -29057456 + AluJb SINE Alu 121 289 -23 213 39 0 0 chr5 174028078 174028104 -29057428 + (TTG)n Simple_repeat Simple_repeat 2 27 0 237 255 324 14 chr5 174028230 174028375 -29057157 - MIR SINE MIR -35 227 38 2295 102 0 0 chr5 174028740 174029035 -29056497 + AluSx SINE Alu 1 295 -17 216 313 0 0 chr5 174029534 174029601 -29055931 + L3 LINE CR1 790 856 -721 1168 161 165 16 chr5 174030194 174030449 -29055083 + MER58B DNA MER1_type 38 330 -11 1439 244 101 50 chr5 174031006 174031560 -29053972 - MLT1K LTR MaLR -4 584 3 3008 206 51 23 chr5 174032002 174032479 -29053053 - MER45B DNA AcHobo -541 1040 537 1578 149 3 52 chr5 174032479 174032787 -29052745 + AluJo SINE Alu 1 293 -19 3008 206 51 23 chr5 174032787 174032995 -29052537 - MER45B DNA AcHobo -1044 537 336 987 171 45 0 chr5 174033034 174033210 -29052322 - MER45B DNA AcHobo -849 191 8 750 239 236 46 chr5 174033354 174033815 -29051717 - MLT1K LTR MaLR -33 555 7 1214 265 121 2 chr5 174033973 174034388 -29051144 - LTR16B LTR ERVL 0 464 1 238 274 0 0 chr5 174034455 174034506 -29051026 + L2 LINE L2 3252 3302 -11 231 339 142 0 chr5 174034719 174034846 -29050686 + MER5A DNA MER1_type 6 150 -39 328 287 21 0 chr5 174035419 174035513 -29050019 - MLT1K LTR MaLR -3 585 490 273 289 0 13 chr5 174035543 174035619 -29049913 - MLT1K LTR MaLR -183 405 331 417 227 118 0 chr5 174035873 174035983 -29049549 + FRAM SINE Alu 13 135 -31 3026 197 125 38 chr5 174035985 174036998 -29048534 + L1ME1 LINE L1 5072 6177 -1 2072 120 3 0 chr5 174037070 174037371 -29048161 + AluSq SINE Alu 4 305 -8 422 220 56 98 chr5 174037448 174037570 -29047962 + L1MC5 LINE L1 7721 7832 -129 1786 126 35 7 chr5 174037570 174037855 -29047677 - AluSx SINE Alu -19 293 1 422 220 56 98 chr5 174037855 174037946 -29047586 + L1MC5 LINE L1 7832 7925 -36 428 208 62 0 chr5 174038278 174038374 -29047158 - Charlie8 DNA MER1_type -2255 162 61 2097 115 23 0 chr5 174038383 174038688 -29046844 + AluSx SINE Alu 1 312 0 366 23 0 0 chr5 174038701 174038744 -29046788 + (CA)n Simple_repeat Simple_repeat 1 43 0 640 207 41 6 chr5 174038772 174038941 -29046591 - MLT1J2 LTR MaLR -266 184 10 454 196 45 30 chr5 174043449 174043582 -29041950 - L2 LINE L2 -296 3017 2883 1678 163 14 3 chr5 174043672 174043961 -29041571 - AluJo SINE Alu -20 292 1 239 248 194 8 chr5 174044057 174044186 -29041346 + MIR3 SINE MIR 55 207 -1 283 250 0 0 chr5 174044521 174044573 -29040959 - L2 LINE L2 -6 3266 3215 1250 258 75 17 chr5 174044766 174045111 -29040421 - LTR33 LTR ERVL -30 491 127 4064 200 42 54 chr5 174045118 174046752 -29038780 + L1MEc LINE L1 1760 3329 -2886 2821 208 52 49 chr5 174046747 174046812 -29038720 + L1M4 LINE L1 4316 4379 -1767 * 1710 173 10 7 chr5 174046812 174047119 -29038413 + AluJo SINE Alu 1 308 -4 2821 208 52 49 chr5 174047119 174047337 -29038195 + L1M4 LINE L1 4379 4595 -1551 2039 122 0 0 chr5 174047337 174047632 -29037900 + AluSx SINE Alu 1 295 -17 2821 208 52 49 chr5 174047632 174047940 -29037592 + L1M4 LINE L1 4595 4914 -1232 2103 110 0 10 chr5 174047940 174048239 -29037293 + AluSx SINE Alu 1 296 -16 2821 208 52 49 chr5 174048239 174048487 -29037045 + L1M4 LINE L1 4914 5160 -986 216 120 87 76 chr5 174048501 174048527 -29037005 + (TTAAA)n Simple_repeat Simple_repeat 5 29 -68 2021 113 0 3 chr5 174048527 174048849 -29036683 - AluSc SINE Alu 0 321 1 216 120 87 76 chr5 174048849 174048913 -29036619 + (TTAAA)n Simple_repeat Simple_repeat 29 97 0 423 159 103 129 chr5 174048915 174048982 -29036550 + L1M4 LINE L1 5128 5195 -951 2056 142 0 0 chr5 174048982 174049292 -29036240 + AluSx SINE Alu 1 310 -2 423 159 103 129 chr5 174049292 174049457 -29036075 + L1M4 LINE L1 5195 5354 -792 * 2495 175 20 2 chr5 174049444 174049774 -29035758 + L1PB4 LINE L1 4835 5158 -998 2334 87 0 0 chr5 174049774 174050084 -29035448 + AluSg SINE Alu 1 310 0 2495 175 20 2 chr5 174050084 174050487 -29035045 + L1PB4 LINE L1 5158 5581 -575 231 215 50 36 chr5 174050508 174050620 -29034912 + L1MC4 LINE L1 6614 6710 -1332 1666 179 13 57 chr5 174050626 174051011 -29034521 + L1PB4 LINE L1 5785 6152 -4 694 75 0 0 chr5 174051025 174051118 -29034414 + L1MB7 LINE L1 6069 6161 -23 1909 100 35 0 chr5 174051129 174051389 -29034143 - AluSx SINE Alu -30 282 14 21 0 0 0 chr5 174051400 174051421 -29034111 + AT_rich Low_complexity Low_complexity 1 21 0 449 287 122 24 chr5 174051694 174051941 -29033591 - L2 LINE L2 -338 2976 2706 234 0 0 0 chr5 174052238 174052264 -29033268 + (TGG)n Simple_repeat Simple_repeat 3 28 0 224 234 0 0 chr5 174052368 174052415 -29033117 + L2 LINE L2 3267 3313 0 437 260 128 10 chr5 174053679 174053883 -29031649 + L2 LINE L2 2923 3150 -163 2918 167 18 4 chr5 174053883 174054385 -29031147 + MER82 DNA MER2_type 1 509 -144 1769 169 58 9 chr5 174054387 174054713 -29030819 - MLT1A1 LTR MaLR -14 351 10 1587 184 11 0 chr5 174054800 174055083 -29030449 + AluJo SINE Alu 1 286 -26 2264 88 0 0 chr5 174055117 174055414 -29030118 - AluSx SINE Alu -15 297 1 323 160 53 13 chr5 174055417 174055492 -29030040 + MER82 DNA MER2_type 570 647 -6 240 268 113 0 chr5 174055548 174055619 -29029913 + L2 LINE L2 3142 3220 -52 742 279 130 6 chr5 174056001 174056317 -29029215 - Tigger8 DNA MER2_type -2 664 310 4699 150 26 47 chr5 174056329 174056904 -29028628 - L1MB8 LINE L1 -12 6166 5617 2076 103 21 0 chr5 174056904 174057194 -29028338 + AluSq SINE Alu 1 296 -17 4699 150 26 47 chr5 174057194 174057551 -29027981 - L1MB8 LINE L1 -561 5617 5254 1882 129 3 62 chr5 174057639 174057948 -29027584 + MER1B DNA MER1_type 49 339 0 327 140 0 0 chr5 174057952 174058009 -29027523 - L1MB8 LINE L1 -904 5242 5186 512 289 128 16 chr5 174058010 174058259 -29027273 - Tigger8 DNA MER2_type -342 324 48 972 247 53 8 chr5 174058259 174058502 -29027030 - MIR SINE MIR -2 260 7 225 263 0 0 chr5 174058917 174058974 -29026558 - L1ME LINE L1 -244 5926 5870 830 303 195 46 chr5 174058997 174059412 -29026120 - L2 LINE L2 0 3313 2961 1568 165 0 34 chr5 174059412 174059733 -29025799 + AluJo SINE Alu 1 311 0 830 303 195 46 chr5 174059733 174059745 -29025787 - L2 LINE L2 -352 2961 2952 1700 151 4 4 chr5 174059745 174060024 -29025508 + AluJo SINE Alu 17 295 -17 830 303 195 46 chr5 174060024 174060302 -29025230 - L2 LINE L2 -361 2952 2717 2223 81 0 0 chr5 174060302 174060586 -29024946 + AluSc SINE Alu 1 284 -25 231 36 0 0 chr5 174060589 174060617 -29024915 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 830 303 195 46 chr5 174060617 174060835 -29024697 - L2 LINE L2 -597 2716 2227 217 306 107 8 chr5 174061824 174061945 -29023587 + MIR3 SINE MIR 70 202 -6 357 235 22 132 chr5 174062081 174062268 -29023264 - MER5A DNA MER1_type -7 182 5 2102 110 3 0 chr5 174062370 174062662 -29022870 + AluSx SINE Alu 7 299 -13 277 30 0 0 chr5 174062741 174062774 -29022758 - MLT2B1 LTR ERVL -3 517 485 1079 235 147 52 chr5 174062829 174063293 -29022239 + MLT1J LTR MaLR 1 508 -3 853 244 39 27 chr5 174063302 174063560 -29021972 - MIR SINE MIR 0 262 2 286 232 274 11 chr5 174063599 174063694 -29021838 - L2 LINE L2 0 3272 3153 2716 85 24 34 chr5 174063703 174064118 -29021414 + MER4A LTR ERV1 1 527 -172 2315 89 13 0 chr5 174064118 174064422 -29021110 + MER4A LTR ERV1 355 662 -2 251 339 35 4 chr5 174065121 174065310 -29020222 - MIR SINE MIR -1 261 1 2327 84 3 0 chr5 174065431 174065741 -29019791 + AluSp SINE Alu 1 311 -2 180 0 0 0 chr5 174065778 174065798 -29019734 + (CA)n Simple_repeat Simple_repeat 1 20 0 702 147 13 168 chr5 174065820 174066052 -29019480 - LTR41 LTR ERVL -8 765 570 311 246 62 118 chr5 174066434 174066935 -29018597 - L1ME4a LINE L1 -53 6068 5596 25 51 0 0 chr5 174068239 174068278 -29017254 + GC_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr5 174068868 174068904 -29016628 + GC_rich Low_complexity Low_complexity 1 36 0 190 172 109 31 chr5 174070000 174070064 -29015468 - MIR SINE MIR -59 149 81 2330 96 0 0 chr5 174070191 174070503 -29015029 - AluSx SINE Alu 0 312 1 377 203 23 105 chr5 174071567 174071700 -29013832 + MIR3 SINE MIR 82 203 -5 255 232 147 32 chr5 174073578 174073673 -29011859 - MIR3 SINE MIR 0 208 103 866 226 23 23 chr5 174073960 174074177 -29011355 - MER20 DNA MER1_type -2 217 1 419 288 16 32 chr5 174075905 174076030 -29009502 - MIR SINE MIR -62 146 24 1380 202 35 3 chr5 174076061 174076348 -29009184 - AluJb SINE Alu -16 296 1 251 225 157 0 chr5 174076657 174076746 -29008786 - L1ME4a LINE L1 -53 6068 5966 1908 142 7 0 chr5 174077152 174077448 -29008084 - AluSx SINE Alu -14 298 1 1598 163 53 3 chr5 174077456 174077739 -29007793 - AluJb SINE Alu -15 297 1 211 271 0 0 chr5 174078770 174078818 -29006714 + L2 LINE L2 3264 3311 -2 23 0 0 0 chr5 174079930 174079953 -29005579 + AT_rich Low_complexity Low_complexity 1 23 0 594 264 183 24 chr5 174081436 174081682 -29003850 - L3 LINE CR1 -2 1575 1291 252 299 119 0 chr5 174082176 174082243 -29003289 - MIR3 SINE MIR -53 155 81 211 301 60 60 chr5 174083490 174083623 -29001909 + MIR SINE MIR 20 152 -56 545 275 25 0 chr5 174083656 174083816 -29001716 - Charlie8 DNA MER1_type -2165 252 89 311 151 0 68 chr5 174083891 174083964 -29001568 + MER5A DNA MER1_type 42 109 -80 2551 62 23 0 chr5 174084543 174084847 -29000685 - AluY SINE Alu 0 311 1 2212 61 19 0 chr5 174085138 174085400 -29000132 + AluSc SINE Alu 26 292 -17 433 276 20 20 chr5 174085426 174085578 -28999954 + MER5A DNA MER1_type 36 187 -2 203 331 128 38 chr5 174085614 174085747 -28999785 + MER5A DNA MER1_type 27 171 -18 1951 109 14 18 chr5 174085767 174086042 -28999490 + AluSx SINE Alu 23 296 -16 566 280 28 52 chr5 174086363 174086613 -28998919 - MIR SINE MIR -3 259 16 318 250 28 19 chr5 174087034 174087142 -28998390 + HAL1b LINE L1 1233 1341 -7 570 211 143 27 chr5 174087436 174087583 -28997949 - MIR SINE MIR -14 248 85 288 226 0 0 chr5 174087669 174087731 -28997801 + L1MC/D LINE L1 5704 5765 -2043 225 223 9 18 chr5 174087812 174087924 -28997608 + (TA)n Simple_repeat Simple_repeat 2 112 0 1950 128 3 39 chr5 174087946 174088251 -28997281 - AluJb SINE Alu -18 294 1 222 302 104 0 chr5 174088364 174088470 -28997062 - L2 LINE L2 -211 3061 2945 605 315 108 5 chr5 174089345 174089548 -28995984 - MIR SINE MIR -4 258 35 263 270 264 14 chr5 174090208 174090356 -28995176 - MIR3 SINE MIR -7 201 17 2338 101 0 22 chr5 174090636 174090952 -28994580 - AluSg SINE Alu -1 309 1 238 224 45 30 chr5 174090958 174091025 -28994507 - MIR SINE MIR -116 146 79 2303 112 0 0 chr5 174091135 174091430 -28994102 - AluSx SINE Alu -17 295 1 302 280 108 0 chr5 174091497 174091590 -28993942 - MIR SINE MIR -108 154 52 291 276 13 26 chr5 174091671 174091747 -28993785 + MIR SINE MIR 13 87 -175 1856 147 31 3 chr5 174091751 174092043 -28993489 + AluSq SINE Alu 1 300 -13 963 114 35 20 chr5 174092046 174092248 -28993284 + Charlie5 DNA MER1_type 2362 2566 -46 228 289 17 110 chr5 174092345 174092518 -28993014 + MIR SINE MIR 42 198 -64 466 278 15 15 chr5 174092528 174092661 -28992871 - MIR SINE MIR -34 228 96 278 204 20 92 chr5 174092791 174092889 -28992643 + MIR3 SINE MIR 85 175 -33 305 242 86 39 chr5 174093383 174093511 -28992021 + MIR SINE MIR 53 137 -71 215 240 90 40 chr5 174093627 174093727 -28991805 - MIR3 SINE MIR 0 208 104 270 0 0 0 chr5 174093864 174093894 -28991638 + (CA)n Simple_repeat Simple_repeat 2 31 0 326 329 181 7 chr5 174093924 174094073 -28991459 + MIR SINE MIR 28 202 -60 305 196 0 0 chr5 174094253 174094304 -28991228 + L2 LINE L2 3219 3269 -3 562 241 119 49 chr5 174094347 174094757 -28990775 - L1ME4a LINE L1 -6 6115 5677 22 70 0 0 chr5 174094813 174094856 -28990676 + AT_rich Low_complexity Low_complexity 1 43 0 228 121 0 86 chr5 174095625 174095683 -28989849 + (GAAA)n Simple_repeat Simple_repeat 4 56 0 220 217 17 50 chr5 174096254 174096314 -28989218 + MIR SINE MIR 205 262 0 181 194 16 16 chr5 174097394 174097456 -28988076 + GA-rich Low_complexity Low_complexity 4 65 0 272 250 0 42 chr5 174099223 174099295 -28986237 + MIR3 SINE MIR 109 177 -31 26 0 0 0 chr5 174100039 174100065 -28985467 + GC_rich Low_complexity Low_complexity 1 26 0 247 304 65 11 chr5 174100783 174100875 -28984657 - MIR3 SINE MIR -8 200 104 273 50 25 0 chr5 174101963 174102003 -28983529 - L2 LINE L2 -3 3310 3270 255 316 58 0 chr5 174102037 174102141 -28983391 - MIR3 SINE MIR -52 156 47 225 320 104 24 chr5 174103680 174103805 -28981727 + MIR3 SINE MIR 31 165 -43 332 246 167 16 chr5 174104218 174104344 -28981188 + MIR SINE MIR 112 256 -6 349 186 62 21 chr5 174105264 174105361 -28980171 - MIR SINE MIR -68 140 40 195 176 0 20 chr5 174105555 174105606 -28979926 - MIR SINE MIR -81 127 78 187 326 76 22 chr5 174107055 174107147 -28978385 + L3 LINE CR1 59 155 -1422 211 255 235 27 chr5 174109186 174109335 -28976197 - MER5A DNA MER1_type -3 186 7 312 244 64 0 chr5 174109443 174109521 -28976011 - L1ME4a LINE L1 -15 6106 6024 214 348 77 26 chr5 174109524 174109679 -28975853 + L2 LINE L2 3146 3308 -5 203 256 0 0 chr5 174109700 174109743 -28975789 + L3 LINE CR1 1526 1568 -9 342 286 270 5 chr5 174110130 174110326 -28975206 - MIR SINE MIR -3 259 12 288 0 0 0 chr5 174110337 174110369 -28975163 + (TG)n Simple_repeat Simple_repeat 2 33 0 2352 101 0 0 chr5 174110449 174110746 -28974786 - AluSx SINE Alu -15 297 1 38 68 0 0 chr5 174110752 174110825 -28974707 + AT_rich Low_complexity Low_complexity 1 73 0 794 176 122 0 chr5 174110927 174111075 -28974457 + FRAM SINE Alu 5 170 -6 534 259 9 0 chr5 174111169 174111285 -28974247 + L2 LINE L2 3197 3313 0 1102 204 15 15 chr5 174111529 174111794 -28973738 - L1MD3 LINE L1 -1 7994 7730 330 279 184 7 chr5 174112319 174112455 -28973077 + L1ME4a LINE L1 5956 6115 -6 734 314 33 0 chr5 174112592 174112802 -28972730 - MIR SINE MIR -5 257 41 409 233 200 8 chr5 174112917 174113037 -28972495 + MER5A DNA MER1_type 41 183 -6 22 0 0 30 chr5 174113068 174113079 -28972453 + AT_rich Low_complexity Low_complexity 1 11 -21 198 103 0 0 chr5 174113079 174113108 -28972424 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 30 chr5 174113108 174113129 -28972403 + AT_rich Low_complexity Low_complexity 11 32 0 536 255 90 15 chr5 174113183 174113383 -28972149 - MER112 DNA MER1_type -1 259 45 2128 119 3 10 chr5 174113471 174113773 -28971759 - AluSx SINE Alu 0 312 13 2629 59 0 0 chr5 174113778 174114082 -28971450 - AluY SINE Alu -7 304 1 354 248 119 0 chr5 174114196 174114297 -28971235 - MIR3 SINE MIR -38 170 58 1973 150 0 43 chr5 174114895 174115221 -28970311 + AluJo SINE Alu 1 312 0 330 112 101 101 chr5 174115421 174115510 -28970022 + L1MC5 LINE L1 7631 7719 -242 2028 108 54 0 chr5 174117307 174117586 -28967946 - AluSp SINE Alu -19 294 1 586 176 53 0 chr5 174118950 174119081 -28966451 + L1MC5 LINE L1 7712 7849 -112 26 0 0 0 chr5 174119368 174119394 -28966138 + AT_rich Low_complexity Low_complexity 1 26 0 695 204 0 30 chr5 174119474 174119606 -28965926 - FLAM_A SINE Alu -9 133 6 24 0 0 0 chr5 174119618 174119642 -28965890 + AT_rich Low_complexity Low_complexity 1 24 0 22 25 0 25 chr5 174119670 174119687 -28965845 + AT_rich Low_complexity Low_complexity 1 17 -22 1853 173 0 7 chr5 174119687 174119976 -28965556 - AluJb SINE Alu -25 287 1 22 25 0 25 chr5 174119976 174119998 -28965534 + AT_rich Low_complexity Low_complexity 17 39 0 225 260 22 53 chr5 174120041 174120124 -28965408 + MIR3 SINE MIR 76 162 -46 670 224 54 79 chr5 174120335 174120516 -28965016 + MIR SINE MIR 28 203 -59 1885 156 3 13 chr5 174120516 174120830 -28964702 + AluJo SINE Alu 1 311 -1 670 224 54 79 chr5 174120830 174120889 -28964643 + MIR SINE MIR 203 262 0 317 258 11 21 chr5 174121232 174121325 -28964207 + MIR3 SINE MIR 115 206 -2 1398 166 68 108 chr5 174122651 174123031 -28962501 - MLT1A1 LTR MaLR 0 365 1 2043 111 7 35 chr5 174123163 174123497 -28962035 + AluSx SINE Alu 1 326 0 1213 196 152 42 chr5 174123888 174124296 -28961236 + LTR16A1 LTR ERVL 1 453 -4 583 265 30 60 chr5 174124576 174124776 -28960756 - MIR SINE MIR -56 206 13 759 290 69 0 chr5 174124902 174125133 -28960399 + MIR SINE MIR 16 262 0 658 236 113 14 chr5 174125354 174125566 -28959966 - Charlie8 DNA MER1_type -2184 233 1 1398 155 0 0 chr5 174125613 174125820 -28959712 + AluSg/x SINE Alu 84 290 -22 213 246 0 0 chr5 174126091 174126156 -28959376 + (TG)n Simple_repeat Simple_repeat 2 66 0 2097 137 23 0 chr5 174126273 174126572 -28958960 - AluSx SINE Alu -6 306 1 237 204 0 0 chr5 174126639 174126688 -28958844 + L1MC/D LINE L1 5856 5904 -1904 1791 168 30 16 chr5 174126952 174127255 -28958277 - AluJb SINE Alu -5 307 1 321 229 239 0 chr5 174127369 174127478 -28958054 - L1ME4a LINE L1 -23 6098 5964 375 266 32 24 chr5 174127595 174127719 -28957813 - MER5A DNA MER1_type -56 133 9 191 265 77 43 chr5 174127766 174127883 -28957649 - MIR SINE MIR -71 137 17 254 286 14 0 chr5 174128234 174128304 -28957228 - MIR SINE MIR -73 135 65 401 226 47 19 chr5 174128574 174128680 -28956852 - MIR3 SINE MIR -18 190 82 190 245 38 94 chr5 174128863 174128969 -28956563 + L3 LINE CR1 1226 1325 -252 832 271 164 7 chr5 174129038 174129477 -28956055 + L2 LINE L2 2806 3313 0 290 234 53 32 chr5 174129477 174129571 -28955961 + L3 LINE CR1 1404 1499 -78 793 178 0 0 chr5 174129617 174129735 -28955797 + AluSq/x SINE Alu 2 119 -194 502 155 60 43 chr5 174129736 174129852 -28955680 - LTR7 LTR ERV1 -7 443 326 198 39 0 0 chr5 174130965 174130991 -28954541 - L2 LINE L2 -365 2949 2924 252 0 0 0 chr5 174131049 174131077 -28954455 + (T)n Simple_repeat Simple_repeat 1 28 0 707 365 22 7 chr5 174131661 174131938 -28953594 + L3 LINE CR1 1295 1575 -2 843 294 63 4 chr5 174133082 174133320 -28952212 - MIR SINE MIR -3 259 8 268 258 21 75 chr5 174133892 174134078 -28951454 - L1ME4a LINE L1 -104 6017 5842 1912 141 0 7 chr5 174134093 174134399 -28951133 - AluSq SINE Alu -6 307 4 935 104 0 8 chr5 174134421 174134555 -28950977 - AluJb SINE Alu -179 133 1 1787 111 15 11 chr5 174134555 174134587 -28950945 - L1MA9 LINE L1 -484 5828 5798 258 32 0 0 chr5 174134587 174134618 -28950914 + (TG)n Simple_repeat Simple_repeat 1 31 0 1787 111 15 11 chr5 174134618 174134855 -28950677 - L1MA9 LINE L1 -514 5798 5558 365 208 192 0 chr5 174135272 174135397 -28950135 + MIR SINE MIR 87 235 -27 195 243 190 138 chr5 174135536 174135783 -28949749 - MIR SINE MIR 0 262 3 1886 141 7 0 chr5 174135825 174136109 -28949423 - AluJo SINE Alu -18 294 9 534 290 93 25 chr5 174137060 174137222 -28948310 + MIR3 SINE MIR 34 206 -2 30 0 0 0 chr5 174137556 174137586 -28947946 + AT_rich Low_complexity Low_complexity 1 30 0 196 220 17 34 chr5 174137617 174137676 -28947856 - L2 LINE L2 -335 2978 2921 2055 142 3 0 chr5 174137884 174138193 -28947339 + 7SLRNA srpRNA srpRNA 2 311 -9 922 176 148 0 chr5 174138345 174138527 -28947005 - MER3 DNA MER1_type 0 209 1 391 132 15 0 chr5 174138578 174138646 -28946886 + MER41A LTR ERV1 400 468 -86 739 254 92 53 chr5 174138810 174139033 -28946499 + L1ME4a LINE L1 5506 5746 -375 836 212 88 5 chr5 174139033 174139226 -28946306 + MER63A DNA MER1_type 1 209 -1 739 254 92 53 chr5 174139226 174139305 -28946227 + L1ME4a LINE L1 5746 5820 -301 713 194 7 32 chr5 174139316 174139471 -28946061 - MER5A DNA MER1_type 0 189 39 625 311 67 17 chr5 174139559 174139797 -28945735 - MIR SINE MIR 0 262 13 426 213 102 8 chr5 174139864 174139991 -28945541 + L1ME4a LINE L1 5981 6119 -2 530 188 10 20 chr5 174140751 174140852 -28944680 + LTR7 LTR ERV1 349 448 -2 1232 146 5 0 chr5 174140856 174141055 -28944477 + AluSg/x SINE Alu 109 308 -2 692 292 10 0 chr5 174141076 174141268 -28944264 + MIR SINE MIR 65 258 -4 314 316 60 37 chr5 174141475 174141693 -28943839 - L2 LINE L2 -125 3147 2925 755 279 105 41 chr5 174141702 174141734 -28943798 - L2 LINE L2 0 3272 3243 2049 181 20 15 chr5 174141734 174142126 -28943406 + MSTD LTR MaLR 3 396 0 755 279 105 41 chr5 174142126 174142726 -28942806 - L2 LINE L2 -29 3243 2590 533 328 70 9 chr5 174142961 174143190 -28942342 - L2 LINE L2 -9 3304 3062 1910 142 28 9 chr5 174143242 174143560 -28941972 - L1MB8 LINE L1 0 6178 5855 2244 106 0 3 chr5 174144158 174144470 -28941062 - AluSx SINE Alu -1 311 1 249 300 171 0 chr5 174144630 174144800 -28940732 + MIR3 SINE MIR 4 202 -6 23 33 0 0 chr5 174144916 174144946 -28940586 + AT_rich Low_complexity Low_complexity 1 30 0 244 243 14 14 chr5 174144949 174145023 -28940509 - L1MC5 LINE L1 -220 7741 7668 692 269 95 28 chr5 174145168 174145451 -28940081 - MLT1H LTR MaLR -237 312 11 483 225 17 29 chr5 174145559 174145695 -28939837 - L1MC5 LINE L1 -1093 6949 6740 1920 95 64 7 chr5 174145706 174146001 -28939531 + AluSq SINE Alu 2 313 0 312 287 28 70 chr5 174146005 174146148 -28939384 - HAL1 LINE L1 -13 2494 2358 21 57 0 0 chr5 174146483 174146518 -28939014 + AT_rich Low_complexity Low_complexity 1 35 0 319 288 128 0 chr5 174146770 174146895 -28938637 + MLT2E LTR ERVL 483 623 -5 2294 173 47 7 chr5 174146931 174147376 -28938156 - L1MB2 LINE L1 -6 6165 5703 237 267 38 67 chr5 174147413 174147518 -28938014 + MIR SINE MIR 1 102 -160 280 386 31 0 chr5 174148038 174148165 -28937367 + MIR SINE MIR 23 153 -55 205 191 0 0 chr5 174148289 174148331 -28937201 + T-rich Low_complexity Low_complexity 1 42 0 2206 110 0 0 chr5 174148394 174148702 -28936830 + AluSg1 SINE Alu 1 308 -1 505 161 2 53 chr5 174148754 174148861 -28936671 + MER20 DNA MER1_type 5 107 -112 782 118 0 0 chr5 174148874 174148984 -28936548 - AluSq/x SINE Alu -201 111 2 1044 133 0 6 chr5 174149050 174149216 -28936316 - AluSg/x SINE Alu -11 299 135 2030 106 0 0 chr5 174149293 174149611 -28935921 - AluSq SINE Alu 0 318 1 443 296 122 0 chr5 174149611 174149726 -28935806 + MIR SINE MIR 41 169 -93 278 268 58 21 chr5 174149789 174149896 -28935636 - MIR SINE MIR -63 145 44 1803 165 0 0 chr5 174149939 174150230 -28935302 + AluJb SINE Alu 1 291 -21 316 340 6 48 chr5 174150714 174150881 -28934651 - MIR SINE MIR -63 145 34 200 289 39 21 chr5 174150908 174151012 -28934520 + MIR SINE MIR 45 149 -68 366 229 46 85 chr5 174151067 174151220 -28934312 + MIR SINE MIR 3 149 -59 197 250 23 0 chr5 174151247 174151291 -28934241 + MIR SINE MIR 218 262 0 438 121 0 0 chr5 174151353 174151419 -28934113 + MIR SINE MIR 80 145 -117 423 256 114 68 chr5 174151890 174152023 -28933509 + L2 LINE L2 2641 2767 -547 1980 126 0 7 chr5 174152023 174152316 -28933216 + AluSx SINE Alu 1 291 -21 423 256 114 68 chr5 174152316 174152490 -28933042 + L2 LINE L2 2767 2962 -352 374 244 0 0 chr5 174152652 174152730 -28932802 + L2 LINE L2 3195 3272 0 322 262 29 19 chr5 174153019 174153122 -28932410 + MIR SINE MIR 88 191 -71 770 199 0 13 chr5 174153234 174153385 -28932147 - FAM SINE Alu -10 175 27 236 258 106 0 chr5 174153475 174153541 -28931991 - L1MC4 LINE L1 -8 8034 7962 1029 256 190 0 chr5 174153543 174153906 -28931626 - L1MC4 LINE L1 -157 7885 7454 211 236 146 34 chr5 174154473 174154562 -28930970 + MIR SINE MIR 31 129 -79 2140 79 0 3 chr5 174154584 174154874 -28930658 + AluSg1 SINE Alu 1 289 -20 202 270 104 43 chr5 174155243 174155358 -28930174 + MIR SINE MIR 23 144 -118 272 220 11 77 chr5 174155638 174155729 -28929803 - MIR SINE MIR -58 150 66 437 220 153 17 chr5 174155771 174155889 -28929643 + MIR SINE MIR 58 191 -71 321 298 0 0 chr5 174156068 174156162 -28929370 + L2 LINE L2 3140 3233 -39 472 287 42 18 chr5 174156170 174156337 -28929195 - MIR SINE MIR 0 262 92 250 281 67 37 chr5 174157129 174157264 -28928268 + MIR SINE MIR 90 228 -34 257 244 134 63 chr5 174157326 174157453 -28928079 + MIR3 SINE MIR 15 150 -58 259 333 0 0 chr5 174157507 174157597 -28927935 + MIR SINE MIR 3 92 -170 778 107 8 0 chr5 174157598 174157719 -28927813 - LTR43 LTR ERV1 0 602 481 1454 138 43 0 chr5 174157719 174157950 -28927582 + AluSx SINE Alu 52 292 -20 2086 116 12 27 chr5 174158100 174158429 -28927103 - LTR43 LTR ERV1 -160 442 119 1105 78 0 0 chr5 174158434 174158575 -28926957 - AluSc SINE Alu -168 141 1 746 165 24 37 chr5 174158655 174158819 -28926713 + MIR SINE MIR 73 234 -28 2355 90 0 0 chr5 174158836 174159137 -28926395 - AluSx SINE Alu -11 301 1 193 300 50 33 chr5 174159265 174159385 -28926147 + MIR3 SINE MIR 54 175 -33 2026 136 43 40 chr5 174159965 174160339 -28925193 + THE1C LTR MaLR 1 375 0 266 164 0 0 chr5 174160488 174160543 -28924989 - MER113 DNA MER1_type? -421 100 46 396 233 52 53 chr5 174160653 174160818 -28924714 + MIR SINE MIR 24 181 -59 254 229 0 16 chr5 174160861 174160922 -28924610 - MIR SINE MIR -129 79 20 215 294 54 65 chr5 174161006 174161098 -28924434 - L2 LINE L2 0 3272 3182 490 292 79 36 chr5 174161185 174161518 -28924014 - L2 LINE L2 -208 3064 2719 399 267 70 43 chr5 174161542 174161831 -28923701 + L1MC4a LINE L1 4680 4976 -1170 1293 51 0 0 chr5 174161836 174161994 -28923538 + L1PA5 LINE L1 5994 6151 -3 3020 170 7 4 chr5 174162221 174162768 -28922764 - L1MB8 LINE L1 -6 6172 5624 2104 107 0 19 chr5 174162775 174163085 -28922447 - AluSg SINE Alu -6 304 1 650 226 79 34 chr5 174163087 174163264 -28922268 + MER58A DNA MER1_type 40 224 0 2349 88 3 0 chr5 174163309 174163617 -28921915 + AluSx SINE Alu 1 309 -3 1806 118 49 3 chr5 174163618 174163905 -28921627 + AluSg SINE Alu 9 308 -2 834 308 118 13 chr5 174164076 174164534 -28920998 - LTR33 LTR ERVL -13 508 3 2030 105 0 18 chr5 174164683 174164998 -28920534 - AluSx SINE Alu 0 310 1 382 260 0 2 chr5 174165029 174165137 -28920395 + L1MC4a LINE L1 5486 5595 -583 2153 101 0 10 chr5 174165164 174165462 -28920070 + AluSx SINE Alu 1 295 -17 323 270 27 0 chr5 174165616 174165690 -28919842 + LTR67 LTR ERVL 116 191 -366 517 267 19 57 chr5 174165954 174166019 -28919513 + L1MC4a LINE L1 5701 5767 -2041 1726 167 20 3 chr5 174166019 174166318 -28919214 + AluJo SINE Alu 1 304 -8 517 267 19 57 chr5 174166318 174166462 -28919070 + L1MC4a LINE L1 5767 5902 -1906 2027 111 3 0 chr5 174166812 174167144 -28918388 - AluSx SINE Alu 0 333 1 894 143 39 0 chr5 174167147 174167301 -28918231 - FRAM SINE Alu -17 159 1 493 321 14 14 chr5 174167340 174167552 -28917980 - L2 LINE L2 -655 2659 2448 251 239 102 23 chr5 174167574 174167662 -28917870 + MIR SINE MIR 119 213 -49 2031 121 0 6 chr5 174168262 174168576 -28916956 - AluSx SINE Alu 0 312 1 240 208 111 97 chr5 174168773 174168917 -28916615 + L2 LINE L2 3162 3307 -6 406 302 104 6 chr5 174169107 174169289 -28916243 - MIR SINE MIR -13 249 50 708 100 0 2 chr5 174169486 174169765 -28915767 + AluSx SINE Alu 1 327 0 3291 129 15 69 chr5 174169772 174170465 -28915067 - L1MA9 LINE L1 -422 5890 5229 2303 154 20 2 chr5 174170465 174170858 -28914674 + L1MA9 LINE L1 5908 6311 -1 1051 289 57 34 chr5 174170993 174171040 -28914492 - MER70A LTR ERVL -43 429 385 2390 69 0 3 chr5 174171040 174171343 -28914189 + AluY SINE Alu 1 302 -9 1051 289 57 34 chr5 174171343 174171713 -28913819 - MER70A LTR ERVL -87 385 2 572 251 159 5 chr5 174171888 174172085 -28913447 - MIR SINE MIR -16 246 20 803 199 0 0 chr5 174172473 174172609 -28912923 + FRAM SINE Alu 11 146 -30 1935 140 0 0 chr5 174172631 174172916 -28912616 + AluSx SINE Alu 1 285 -27 240 35 0 0 chr5 174172916 174172945 -28912587 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 1810 178 0 0 chr5 174172945 174173254 -28912278 + AluSx SINE Alu 1 309 -3 198 0 0 0 chr5 174173278 174173300 -28912232 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 593 208 48 8 chr5 174173822 174173947 -28911585 + MIR SINE MIR 57 186 -76 418 231 29 0 chr5 174173998 174174102 -28911430 + MIR3 SINE MIR 54 160 -48 232 186 136 0 chr5 174174102 174174161 -28911371 - MER113 DNA MER1_type? 0 521 455 255 235 24 24 chr5 174174270 174174355 -28911177 - MER113 DNA MER1_type? -406 115 31 493 293 52 44 chr5 174175038 174175267 -28910265 - MIR SINE MIR -31 231 1 232 328 0 0 chr5 174175489 174175556 -28909976 + CT-rich Low_complexity Low_complexity 2 68 0 263 290 172 12 chr5 174175592 174175761 -28909771 - L3 LINE CR1 -248 1329 1134 242 278 98 3 chr5 174175898 174176002 -28909530 + MIR SINE MIR 45 157 -66 232 300 122 22 chr5 174176018 174176198 -28909334 + MLT1K LTR MaLR 24 221 -367 * 265 288 137 41 chr5 174176188 174176333 -28909199 + MLT1K LTR MaLR 363 521 -67 1508 226 89 36 chr5 174176333 174176748 -28908784 + MLT1H LTR MaLR 1 437 -112 1098 118 12 0 chr5 174176785 174176955 -28908577 - AluSg SINE Alu -13 299 128 285 234 16 0 chr5 174176956 174177020 -28908512 + MLT1H LTR MaLR 477 541 -8 239 340 68 0 chr5 174177100 174177203 -28908329 + MIR SINE MIR 153 262 0 612 264 37 46 chr5 174177438 174177490 -28908042 + MIR SINE MIR 28 79 -183 2011 170 0 80 chr5 174177490 174177914 -28907618 + MLT1B LTR MaLR 1 390 0 612 264 37 46 chr5 174177914 174178096 -28907436 + MIR SINE MIR 79 254 -8 2275 90 0 3 chr5 174178349 174178659 -28906873 - AluSg SINE Alu 0 310 2 648 254 97 44 chr5 174179288 174179516 -28906016 + MIR SINE MIR 9 248 -14 378 0 0 0 chr5 174179519 174179561 -28905971 + (TG)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr5 174179852 174179875 -28905657 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 340 377 50 4 chr5 174179875 174180107 -28905425 - L1MB8 LINE L1 -298 5880 5635 3922 103 108 5 chr5 174180107 174180717 -28904815 + L1PA16 LINE L1 5485 6157 -9 36 0 0 0 chr5 174180717 174180753 -28904779 + AT_rich Low_complexity Low_complexity 1 36 0 712 191 55 16 chr5 174181117 174181300 -28904232 - L1ME2 LINE L1 -11 6153 5964 992 122 0 0 chr5 174181518 174181649 -28903883 - AluSg SINE Alu -179 131 1 1906 151 0 26 chr5 174181650 174181955 -28903577 - AluJo SINE Alu -15 297 1 1375 166 32 76 chr5 174181960 174182385 -28903147 - L1MB8 LINE L1 -556 5608 5166 2075 118 35 0 chr5 174182385 174182672 -28902860 - AluSp SINE Alu -15 298 2 1375 166 32 76 chr5 174182672 174182687 -28902845 - L1MB8 LINE L1 -998 5166 5152 1860 148 20 7 chr5 174182687 174182985 -28902547 - AluSq SINE Alu -11 302 1 1375 166 32 76 chr5 174182985 174183049 -28902483 - L1MB8 LINE L1 -1012 5152 5127 * 6151 187 45 70 chr5 174183045 174183703 -28901829 - L1MC1 LINE L1 0 6402 5729 405 0 0 0 chr5 174183703 174183748 -28901784 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 2120 119 0 0 chr5 174183750 174184027 -28901505 - AluSx SINE Alu -35 277 1 6151 187 45 70 chr5 174184027 174185178 -28900354 - L1MC1 LINE L1 -674 5728 4549 2258 101 0 33 chr5 174185178 174185485 -28900047 + AluSq SINE Alu 1 297 -16 6151 187 45 70 chr5 174185485 174185897 -28899635 - L1MC1 LINE L1 -1853 4549 4128 1755 181 7 3 chr5 174185897 174186190 -28899342 - AluJo SINE Alu -18 294 1 6151 187 45 70 chr5 174186190 174186315 -28899217 - L1MC1 LINE L1 -2274 4128 4001 1693 201 0 22 chr5 174186315 174186633 -28898899 - AluJo SINE Alu -1 311 1 6151 187 45 70 chr5 174186633 174186916 -28898616 - L1MC1 LINE L1 -2401 4001 3844 2830 83 0 3 chr5 174186956 174187329 -28898203 - L1PB1 LINE L1 -1 6150 5779 437 118 5 123 chr5 174187331 174187534 -28897998 + (TA)n Simple_repeat Simple_repeat 1 179 0 317 93 0 0 chr5 174187540 174187583 -28897949 - L1PB1 LINE L1 -361 5790 5748 2166 133 33 41 chr5 174187583 174187950 -28897582 + THE1B LTR MaLR 1 364 0 3532 136 5 6 chr5 174187962 174188822 -28896710 + L1P5 LINE L1 4873 5732 -419 * 4262 235 63 49 chr5 174188819 174189041 -28896491 - L1MC1 LINE L1 -2354 3861 3644 2987 6 0 0 chr5 174189041 174189358 -28896174 - AluYb8 SINE Alu -1 317 1 4262 235 63 49 chr5 174189358 174189369 -28896163 - L1MC1 LINE L1 -2571 3644 3635 2026 152 0 7 chr5 174189369 174189672 -28895860 - AluJb SINE Alu -11 301 1 4262 235 63 49 chr5 174189672 174190060 -28895472 - L1MC1 LINE L1 -2580 3635 3254 425 60 60 0 chr5 174190060 174190127 -28895405 - L1MA3 LINE L1 0 6305 6235 4262 235 63 49 chr5 174190127 174191155 -28894377 - L1MC1 LINE L1 -2961 3254 2234 2018 149 7 0 chr5 174191155 174191443 -28894089 + AluSx SINE Alu 1 290 -22 4262 235 63 49 chr5 174191443 174191588 -28893944 - L1MC1 LINE L1 -3981 2234 2093 381 43 0 0 chr5 174191596 174191643 -28893889 + (TA)n Simple_repeat Simple_repeat 1 47 0 2358 52 3 10 chr5 174191866 174192154 -28893378 - AluY SINE Alu -5 306 21 258 105 0 0 chr5 174192506 174192544 -28892988 + (GGA)n Simple_repeat Simple_repeat 2 39 0 195 162 0 0 chr5 174192581 174192618 -28892914 + T-rich Low_complexity Low_complexity 2 38 0 1370 240 42 92 chr5 174193404 174193459 -28892073 - L1MC1 LINE L1 -4315 2081 2025 2167 121 7 0 chr5 174193459 174193766 -28891766 - AluSx SINE Alu -3 309 1 1370 240 42 92 chr5 174193766 174194177 -28891355 - L1MC1 LINE L1 -4371 2025 1595 2107 95 10 20 chr5 174194177 174194472 -28891060 + AluSx SINE Alu 1 292 -20 2838 20 0 0 chr5 174194479 174194784 -28890748 + AluY SINE Alu 1 305 -6 1370 240 42 92 chr5 174194784 174194992 -28890540 - L1MC1 LINE L1 -4807 1589 1432 967 122 0 0 chr5 174195017 174195148 -28890384 - AluJb SINE Alu -179 133 3 1004 280 43 63 chr5 174195479 174196018 -28889514 - L1MC1 LINE L1 -5540 665 138 595 262 77 103 chr5 174196022 174196736 -28888796 - L1M4 LINE L1 -1074 5072 4376 1583 176 14 24 chr5 174196736 174196917 -28888615 - AluJb SINE Alu -26 286 108 2294 97 0 10 chr5 174196917 174197217 -28888315 + AluSg SINE Alu 1 297 -13 1583 176 14 24 chr5 174197217 174197324 -28888208 - AluJb SINE Alu -204 108 1 595 262 77 103 chr5 174197324 174197345 -28888187 - L1M4 LINE L1 -1770 4376 4356 232 252 126 22 chr5 174197522 174197657 -28887875 - L2 LINE L2 -7 3306 3158 2135 117 0 23 chr5 174197660 174197968 -28887564 + AluSg SINE Alu 4 304 -6 1309 246 104 27 chr5 174198055 174198317 -28887215 - L2 LINE L2 -141 3172 2931 1767 114 20 62 chr5 174198317 174198623 -28886909 + AluSx SINE Alu 1 293 -19 1309 246 104 27 chr5 174198623 174198966 -28886566 - L2 LINE L2 -382 2931 2517 863 232 69 5 chr5 174198984 174199439 -28886093 + LTR33 LTR ERVL 6 519 -2 219 243 144 36 chr5 174199668 174199779 -28885753 + MIR SINE MIR 20 142 -66 240 217 174 0 chr5 174199914 174199983 -28885549 + MIR SINE MIR 74 154 -108 2633 143 27 2 chr5 174199997 174200402 -28885130 - MSTB LTR MaLR -11 415 1 809 100 108 15 chr5 174200741 174200871 -28884661 + FRAM SINE Alu 21 162 -14 314 77 0 0 chr5 174200873 174200912 -28884620 + Alu SINE Alu 1 39 -263 1328 101 6 6 chr5 174200914 174201130 -28884402 + AluSg/x SINE Alu 104 319 0 462 281 182 13 chr5 174201130 174201369 -28884163 - L1ME3A LINE L1 -239 5931 5663 496 212 9 0 chr5 174201771 174201884 -28883648 + MIR SINE MIR 33 146 -62 710 222 96 30 chr5 174201898 174201928 -28883604 + MIR SINE MIR 5 32 -230 2132 128 3 3 chr5 174201928 174202226 -28883306 + AluSx SINE Alu 1 298 -14 710 222 96 30 chr5 174202226 174202425 -28883107 + MIR SINE MIR 32 249 -13 2304 93 14 0 chr5 174202708 174202997 -28882535 - AluSx SINE Alu -17 295 3 439 298 19 6 chr5 174203033 174203191 -28882341 - MIR SINE MIR -6 256 97 399 41 0 0 chr5 174203722 174203771 -28881761 + (CA)n Simple_repeat Simple_repeat 2 50 0 1247 177 10 0 chr5 174204016 174204225 -28881307 - AluJb SINE Alu -15 297 87 344 229 229 0 chr5 174204321 174204443 -28881089 - MER5A DNA MER1_type -22 167 18 208 279 64 14 chr5 174204541 174204681 -28880851 - MIR3 SINE MIR -20 188 42 258 319 49 12 chr5 174204795 174204979 -28880553 - MIR SINE MIR -20 242 55 696 158 69 165 chr5 174205070 174205256 -28880276 + MER113 DNA MER1_type? 157 307 -214 1766 149 0 4 chr5 174205256 174205518 -28880014 + AluJo SINE Alu 26 286 -26 696 158 69 165 chr5 174205518 174205622 -28879910 + MER113 DNA MER1_type? 307 419 -102 2256 99 0 0 chr5 174206383 174206688 -28878844 + AluSx SINE Alu 1 305 0 1370 214 111 16 chr5 174207107 174207477 -28878055 - MLT1C LTR MaLR -9 458 54 * 1506 209 62 3 chr5 174207474 174207814 -28877718 + MLT1A1 LTR MaLR 6 365 0 194 361 21 0 chr5 174207935 174208032 -28877500 + MIR SINE MIR 64 162 -100 254 179 18 0 chr5 174208217 174208273 -28877259 + CT-rich Low_complexity Low_complexity 3 59 0 518 233 0 0 chr5 174208346 174208466 -28877066 - MIR SINE MIR -37 225 106 235 299 152 35 chr5 174208475 174208706 -28876826 + L3 LINE CR1 1308 1565 -12 298 269 30 52 chr5 174208900 174209034 -28876498 - MIR SINE MIR -19 243 113 355 125 0 0 chr5 174209260 174209316 -28876216 + L2 LINE L2 3255 3310 -3 253 225 80 97 chr5 174209816 174209970 -28875562 + MIR3 SINE MIR 27 186 -22 32 0 0 0 chr5 174210225 174210257 -28875275 + AT_rich Low_complexity Low_complexity 1 32 0 431 215 54 0 chr5 174210628 174210721 -28874811 + L2 LINE L2 3198 3295 -18 219 114 0 0 chr5 174210722 174210757 -28874775 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 2234 115 0 0 chr5 174210821 174211109 -28874423 + AluSx SINE Alu 1 288 -24 203 294 8 67 chr5 174211228 174211347 -28874185 - MIR3 SINE MIR -39 169 58 189 228 139 30 chr5 174211555 174211656 -28873876 + MIR SINE MIR 108 219 -43 1689 134 0 0 chr5 174211704 174211943 -28873589 + AluSx SINE Alu 1 239 -73 1836 139 13 26 chr5 174211991 174212294 -28873238 + AluJb SINE Alu 1 299 -13 268 263 21 0 chr5 174212342 174212437 -28873095 + (TA)n Simple_repeat Simple_repeat 2 98 0 2222 118 3 6 chr5 174212497 174212810 -28872722 - AluSx SINE Alu 0 312 1 290 246 85 49 chr5 174212894 174213118 -28872414 + L1ME LINE L1 5266 5497 -624 355 295 98 6 chr5 174213586 174213759 -28871773 - MIR3 SINE MIR -13 195 7 1592 185 0 36 chr5 174213959 174214261 -28871271 - AluJo SINE Alu -20 292 2 1317 158 42 33 chr5 174214291 174214566 -28870966 + AluJo SINE Alu 40 316 0 43 35 0 0 chr5 174214587 174214644 -28870888 + AT_rich Low_complexity Low_complexity 1 57 0 956 262 9 0 chr5 174214928 174215149 -28870383 - MER58A DNA MER1_type -1 223 1 236 254 155 0 chr5 174215149 174215220 -28870312 + MIR SINE MIR 17 98 -164 194 258 0 164 chr5 174215367 174215385 -28870147 + MIR SINE MIR 42 61 -147 1957 151 0 7 chr5 174215385 174215683 -28869849 - AluJb SINE Alu -12 300 5 194 258 0 164 chr5 174215683 174215792 -28869740 + MIR SINE MIR 61 148 -60 413 285 119 27 chr5 174215815 174216009 -28869523 - MIR SINE MIR -55 207 3 2377 99 3 6 chr5 174216031 174216344 -28869188 + AluSp SINE Alu 1 312 -1 708 54 45 9 chr5 174216344 174216456 -28869076 + (GAGAA)n Simple_repeat Simple_repeat 3 118 0 326 295 50 7 chr5 174217216 174217355 -28868177 + MIR3 SINE MIR 12 156 -52 461 206 71 14 chr5 174217377 174217518 -28868014 + MIR SINE MIR 4 152 -110 632 215 138 32 chr5 174217978 174218225 -28867307 - ORSL DNA AcHobo -2 273 1 270 283 30 30 chr5 174218262 174218361 -28867171 + L2 LINE L2 3124 3222 -50 1470 127 90 107 chr5 174218639 174218777 -28866755 + AluJb SINE Alu 6 145 -167 2348 95 0 7 chr5 174218777 174219081 -28866451 + AluSq SINE Alu 1 302 -11 2149 98 16 13 chr5 174219089 174219394 -28866138 + AluSq SINE Alu 7 312 -1 1470 127 90 107 chr5 174219394 174219546 -28865986 + AluJb SINE Alu 152 300 -12 312 271 57 25 chr5 174219665 174219787 -28865745 - MIR3 SINE MIR -15 193 68 1638 116 0 0 chr5 174219833 174220049 -28865483 + AluSc SINE Alu 1 216 -93 595 138 9 9 chr5 174220049 174220165 -28865367 + GA-rich Low_complexity Low_complexity 2 117 0 207 0 0 0 chr5 174220287 174220310 -28865222 + (CA)n Simple_repeat Simple_repeat 2 24 0 2225 92 17 3 chr5 174221630 174221925 -28863607 + AluSc SINE Alu 1 299 -10 195 236 18 18 chr5 174221929 174221984 -28863548 + MIR SINE MIR 136 190 -72 7479 28 7 2 chr5 174223628 174224672 -28860860 + L1PA3 LINE L1 5102 6152 -3 1730 126 36 0 chr5 174225003 174225280 -28860252 - AluSx SINE Alu -25 287 1 584 181 0 68 chr5 174225286 174225419 -28860113 - FRAM SINE Alu 0 176 53 2171 105 3 0 chr5 174225441 174225726 -28859806 - AluSx SINE Alu -26 286 1 398 274 149 29 chr5 174225743 174225951 -28859581 - MIR SINE MIR 0 262 30 3297 98 21 8 chr5 174226219 174226830 -28858702 + L1P5 LINE L1 5109 5732 -419 377 274 67 17 chr5 174226837 174227016 -28858516 - L1M4 LINE L1 -2365 3781 3594 2667 21 0 0 chr5 174227039 174227330 -28858202 - AluYb8 SINE Alu 0 318 28 260 235 0 29 chr5 174227706 174227842 -28857690 + C-rich Low_complexity Low_complexity 5 136 0 203 183 49 12 chr5 174228012 174228094 -28857438 + CT-rich Low_complexity Low_complexity 1 85 0 368 155 17 0 chr5 174228094 174228152 -28857380 - AluJ/FLAM SINE Alu -242 60 2 405 274 77 106 chr5 174228153 174228441 -28857091 - L1MC/D LINE L1 -2042 5766 5488 788 154 15 37 chr5 174228441 174228577 -28856955 - FLAM_C SINE Alu 0 133 1 405 274 77 106 chr5 174228577 174228627 -28856905 - L1MC/D LINE L1 -2320 5488 5438 2147 109 14 0 chr5 174228627 174228920 -28856612 - AluSp SINE Alu -14 299 3 2344 156 8 0 chr5 174229175 174229567 -28855965 - L1MB4 LINE L1 -3 6177 5783 1225 203 9 5 chr5 174229567 174229784 -28855748 + Tigger7 DNA MER2_type 3 220 -513 579 154 11 0 chr5 174229948 174230039 -28855493 + Tigger7 DNA MER2_type 2495 2586 -1 2675 151 2 43 chr5 174230040 174230523 -28855009 - L1MB4 LINE L1 -394 5786 5324 994 190 0 44 chr5 174230529 174230734 -28854798 - AluJo SINE Alu -10 302 107 367 139 93 0 chr5 174230741 174230827 -28854705 + AluS SINE Alu 3 96 -206 452 283 42 71 chr5 174231022 174231456 -28854076 - L1MC5 LINE L1 -32 7929 7509 243 207 0 69 chr5 174231528 174231586 -28853946 - L2 LINE L2 -9 3263 3210 2223 111 7 0 chr5 174231590 174231897 -28853635 - AluSp SINE Alu -4 309 1 482 155 31 70 chr5 174231903 174232032 -28853500 - FRAM SINE Alu 0 176 53 862 128 15 15 chr5 174232266 174232399 -28853133 - FLAM_C SINE Alu 0 133 1 352 284 118 85 chr5 174232724 174232793 -28852739 - MIR SINE MIR -25 237 172 2221 104 0 0 chr5 174232793 174233080 -28852452 - AluSx SINE Alu -25 287 1 352 284 118 85 chr5 174233080 174233221 -28852311 - MIR SINE MIR -90 172 20 1976 193 21 30 chr5 174233601 174233842 -28851690 - L1MB4 LINE L1 -821 5325 5088 2546 79 0 0 chr5 174233842 174234147 -28851385 + AluSp SINE Alu 1 305 -8 1976 193 21 30 chr5 174234147 174234371 -28851161 - L1MB4 LINE L1 -1058 5088 4864 267 129 113 0 chr5 174235024 174235086 -28850446 + AluJ/FLAM SINE Alu 1 69 -233 456 180 26 144 chr5 174235198 174235392 -28850140 + MIR SINE MIR 92 262 0 237 365 41 28 chr5 174235691 174235836 -28849696 + L2 LINE L2 3126 3272 0 731 122 5 48 chr5 174235839 174236027 -28849505 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 645 168 0 0 chr5 174236083 174236214 -28849318 + (TGGA)n Simple_repeat Simple_repeat 1 131 0 1011 284 88 42 chr5 174236271 174236648 -28848884 + L2 LINE L2 2919 3312 -1 2316 102 7 3 chr5 174236951 174237256 -28848276 + AluSg SINE Alu 1 306 -4 352 238 57 19 chr5 174237332 174237437 -28848095 - MIR SINE MIR -96 166 58 494 159 79 24 chr5 174237465 174237591 -28847941 - FLAM_C SINE Alu 0 133 1 450 273 48 22 chr5 174237769 174237929 -28847603 + L2 LINE L2 2892 3057 -215 553 220 258 11 chr5 174238409 174238595 -28846937 + MIR SINE MIR 26 257 -5 477 303 82 19 chr5 174238906 174239114 -28846418 + MIR SINE MIR 36 256 -6 664 256 23 13 chr5 174239164 174239333 -28846199 + MLT1H1 LTR MaLR 1 168 -422 1942 178 0 0 chr5 174239333 174239637 -28845895 + AluJo SINE Alu 1 304 -8 664 256 23 13 chr5 174239637 174239681 -28845851 + MLT1H1 LTR MaLR 168 210 -380 1094 138 6 0 chr5 174240351 174240510 -28845022 - AluSx SINE Alu -152 160 1 552 238 106 94 chr5 174240537 174240752 -28844780 - L1MB4 LINE L1 -1367 4779 4568 1975 133 10 20 chr5 174240752 174241053 -28844479 - AluSx SINE Alu -14 298 1 552 238 106 94 chr5 174241053 174241107 -28844425 - L1MB4 LINE L1 -1578 4568 4516 1987 119 10 36 chr5 174241107 174241409 -28844123 - AluSg SINE Alu -16 294 1 2324 96 7 10 chr5 174241416 174241719 -28843813 - AluSp SINE Alu -11 302 1 552 238 106 94 chr5 174241719 174241844 -28843688 - L1MB4 LINE L1 -1635 4511 4371 858 167 0 8 chr5 174241870 174242002 -28843530 - FLAM_C SINE Alu 0 133 3 298 316 47 20 chr5 174242034 174242287 -28843245 - L1MB4 LINE L1 -1815 4331 4072 742 140 84 0 chr5 174242469 174242612 -28842920 + MER3 DNA MER1_type 12 166 -43 996 152 29 5 chr5 174242619 174242829 -28842703 + MER3 DNA MER1_type 2236 2450 0 337 225 254 14 chr5 174243378 174243520 -28842012 + MIR3 SINE MIR 6 181 -27 574 273 193 27 chr5 174243617 174243954 -28841578 + L2 LINE L2 2920 3312 -1 192 125 0 0 chr5 174243956 174243988 -28841544 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 248 250 0 42 chr5 174244018 174244090 -28841442 + CT-rich Low_complexity Low_complexity 4 72 0 2382 89 3 0 chr5 174244711 174245014 -28840518 - AluSp SINE Alu -9 304 1 246 80 60 0 chr5 174245169 174245219 -28840313 + (CA)n Simple_repeat Simple_repeat 2 54 0 186 103 0 0 chr5 174245279 174245308 -28840224 + (TG)n Simple_repeat Simple_repeat 2 30 0 2191 111 10 0 chr5 174245312 174245600 -28839932 - AluSq SINE Alu -22 291 1 3058 69 19 7 chr5 174245603 174246026 -28839506 - L1PA8 LINE L1 -14 6158 5731 432 206 11 0 chr5 174246405 174246497 -28839035 - AluJ/FRAM SINE Alu -1 311 219 754 173 0 0 chr5 174246513 174246646 -28838886 - FLAM_C SINE Alu 0 133 1 228 317 98 8 chr5 174246850 174246973 -28838559 + MIR3 SINE MIR 1 134 -74 2154 93 20 27 chr5 174247209 174247509 -28838023 - AluSx SINE Alu -14 298 1 346 261 174 18 chr5 174247509 174247727 -28837805 + MER102b DNA MER1_type 90 341 0 285 288 0 0 chr5 174247760 174247833 -28837699 + L2 LINE L2 3241 3313 0 281 227 198 51 chr5 174247999 174248156 -28837376 - MIR3 SINE MIR -72 190 13 294 292 11 0 chr5 174248320 174248409 -28837123 + MER5A DNA MER1_type 100 189 0 194 244 12 85 chr5 174248338 174248420 -28837112 - MER5A DNA MER1_type -107 82 7 * 246 235 136 0 chr5 174248534 174248615 -28836917 - L2 LINE L2 -44 3228 3137 1801 201 116 16 chr5 174248803 174249241 -28836291 - MLT2B1 LTR ERVL -38 482 1 214 239 45 68 chr5 174249916 174250004 -28835528 + MIR SINE MIR 3 88 -174 288 318 9 19 chr5 174250489 174250535 -28834997 + CT-rich Low_complexity Low_complexity 4 49 -60 2013 139 7 7 chr5 174250535 174250823 -28834709 - AluSx SINE Alu -22 290 3 288 318 9 19 chr5 174250823 174250883 -28834649 + CT-rich Low_complexity Low_complexity 49 109 0 2468 97 0 0 chr5 174250905 174251244 -28834288 - AluSx SINE Alu 0 339 1 579 228 53 101 chr5 174251389 174251617 -28833915 - MLT1J LTR MaLR -72 439 223 2338 99 0 0 chr5 174251624 174251916 -28833616 + AluY SINE Alu 3 294 -17 234 235 0 0 chr5 174252679 174252730 -28832802 - MIR SINE MIR -13 249 199 338 259 37 0 chr5 174252732 174252813 -28832719 - L2 LINE L2 -5 3308 3225 236 269 19 0 chr5 174252991 174253043 -28832489 - MIR3 SINE MIR -53 155 103 207 0 0 0 chr5 174253752 174253775 -28831757 + (TG)n Simple_repeat Simple_repeat 2 24 0 862 164 57 0 chr5 174253775 174253915 -28831617 - AluJb SINE Alu -27 285 138 3274 140 37 3 chr5 174254017 174254589 -28830943 - HERVK LTR ERVK -6652 591 1 3650 213 18 72 chr5 174254589 174255614 -28829918 - LTR5 LTR ERVK 0 969 1 10086 195 11 18 chr5 174255616 174257860 -28827672 - HERVK LTR ERVK -2 7392 5188 608 100 0 0 chr5 174257860 174257940 -28827592 + AluSg/x SINE Alu 212 291 -19 6163 72 27 35 chr5 174257949 174259177 -28826355 + SVA Other Other 5 935 -451 507 125 101 12 chr5 174259314 174259482 -28826050 + SVA Other Other 684 866 -520 6788 64 17 46 chr5 174259494 174260480 -28825052 + SVA Other Other 429 1386 0 396 186 0 0 chr5 174260483 174260601 -28824931 + A-rich Low_complexity Low_complexity 1 118 0 5424 101 38 14 chr5 174260601 174261427 -28824105 - HERVK LTR ERVK -1934 5309 4465 * 15369 177 15 6 chr5 174261424 174264210 -28821322 - HERVK LTR ERVK -3691 3552 743 4276 153 26 8 chr5 174264278 174265040 -28820492 - HERVK LTR ERVK -6467 776 1 3393 204 23 59 chr5 174265040 174265909 -28819623 - LTR5 LTR ERVK 0 969 132 450 264 39 0 chr5 174265933 174266062 -28819470 - SVA Other Other -314 1072 939 635 159 49 0 chr5 174266066 174266229 -28819303 + Charlie5 DNA MER1_type 2410 2580 -32 252 0 0 0 chr5 174266340 174266368 -28819164 + (A)n Simple_repeat Simple_repeat 1 28 0 187 283 19 0 chr5 174266387 174266440 -28819092 + MIR SINE MIR 155 208 -54 677 280 85 0 chr5 174266485 174266696 -28818836 - MIR SINE MIR -18 244 16 2265 110 0 7 chr5 174266767 174267077 -28818455 + AluSq SINE Alu 1 308 -5 481 261 85 20 chr5 174267359 174267512 -28818020 - MIR3 SINE MIR -24 184 22 471 324 29 57 chr5 174267686 174267780 -28817752 - MIR SINE MIR -13 249 154 2015 97 0 4 chr5 174267780 174268039 -28817493 - AluSg SINE Alu -18 292 35 471 324 29 57 chr5 174268039 174268154 -28817378 - MIR SINE MIR -108 154 46 478 310 1 4 chr5 174268293 174268418 -28817114 + MIR SINE MIR 8 130 -78 1224 215 129 30 chr5 174268546 174269025 -28816507 - L1ME1 LINE L1 0 6164 5618 2228 115 3 0 chr5 174269119 174269415 -28816117 - AluSq SINE Alu -10 303 7 1452 204 3 28 chr5 174269500 174269784 -28815748 - AluJo SINE Alu -31 281 5 1643 208 15 29 chr5 174269793 174269948 -28815584 - L1ME1 LINE L1 -545 5621 5465 2407 104 3 0 chr5 174269948 174270256 -28815276 - AluSp SINE Alu -4 309 1 1643 208 15 29 chr5 174270256 174270587 -28814945 - L1ME1 LINE L1 -701 5465 5140 2129 143 0 7 chr5 174270587 174270888 -28814644 - AluSx SINE Alu -13 299 1 1643 208 15 29 chr5 174270888 174270951 -28814581 - L1ME1 LINE L1 -1026 5140 5078 463 319 56 0 chr5 174270951 174271095 -28814437 + MIR3 SINE MIR 43 194 -14 495 250 101 39 chr5 174271136 174271344 -28814188 - MIR SINE MIR -1 261 41 31 76 0 0 chr5 174271903 174271969 -28813563 + AT_rich Low_complexity Low_complexity 1 66 0 214 325 0 25 chr5 174272824 174272843 -28812689 - MIR SINE MIR -137 125 107 2542 71 0 0 chr5 174272843 174273151 -28812381 - AluSc SINE Alu -1 308 1 214 325 0 25 chr5 174273151 174273211 -28812321 - MIR SINE MIR -155 107 48 666 281 177 17 chr5 174273900 174274442 -28811090 - L2 LINE L2 0 3313 2681 461 229 115 16 chr5 174274821 174274943 -28810589 - MER69A DNA AcHobo -42 135 2 191 175 50 0 chr5 174274962 174275002 -28810530 - MIR SINE MIR -57 151 110 855 120 0 0 chr5 174275296 174275413 -28810119 - AluSq SINE Alu -8 305 189 612 96 0 0 chr5 174275414 174275497 -28810035 + AluY SINE Alu 219 301 -10 1533 105 5 0 chr5 174275499 174275699 -28809833 - AluSq SINE Alu -112 201 1 431 274 26 33 chr5 174275730 174275883 -28809649 + MER5A DNA MER1_type 10 161 -28 231 331 51 19 chr5 174275752 174275909 -28809623 - MER5B DNA MER1_type -16 162 1 * 505 309 15 15 chr5 174276318 174276454 -28809078 - MIR SINE MIR -126 136 1 603 301 36 0 chr5 174276711 174276877 -28808655 - MER5A DNA MER1_type -10 179 8 971 212 157 21 chr5 174277266 174277537 -28807995 + MLT1I LTR MaLR 41 365 -44 2073 95 39 0 chr5 174277537 174277820 -28807712 - AluSx SINE Alu -18 294 1 971 212 157 21 chr5 174277820 174277873 -28807659 + MLT1I LTR MaLR 365 409 0 292 250 167 0 chr5 174277971 174278079 -28807453 - MIR SINE MIR -12 250 125 241 253 84 12 chr5 174278187 174278270 -28807262 + MIR SINE MIR 92 180 -82 668 296 32 29 chr5 174278468 174278690 -28806842 - MIR SINE MIR -13 249 29 190 227 0 91 chr5 174278736 174278802 -28806730 - MIR SINE MIR -133 75 16 538 281 84 22 chr5 174279351 174279529 -28806003 - MIR SINE MIR 0 262 74 543 289 108 0 chr5 174279545 174279739 -28805793 - MIR SINE MIR 0 262 48 234 81 27 0 chr5 174279743 174279780 -28805752 + HY4 scRNA scRNA 56 93 0 1099 216 58 75 chr5 174280544 174280892 -28804640 - MLT2D LTR ERVL -7 407 66 997 200 0 0 chr5 174280893 174281058 -28804474 - FRAM SINE Alu -13 163 1 290 159 79 0 chr5 174281059 174281107 -28804425 - MLT2D LTR ERVL -396 68 12 1491 187 27 3 chr5 174281107 174281407 -28804125 + L1MB3 LINE L1 5877 6183 0 290 159 79 0 chr5 174281407 174281421 -28804111 - MLT2D LTR ERVL -452 12 1 2112 130 10 0 chr5 174281435 174281743 -28803789 + AluSx SINE Alu 1 311 -1 239 191 117 96 chr5 174281813 174281907 -28803625 - L2 LINE L2 -6 3307 3212 * 520 297 13 11 chr5 174281903 174282106 -28803426 - MIR SINE MIR -34 228 25 228 343 50 0 chr5 174282153 174282252 -28803280 - L2 LINE L2 -1529 1785 1682 539 160 21 3 chr5 174482271 174482398 -28603134 - HUERS-P2 LTR ERV1 -455 2633 2468 2909 214 21 12 chr5 174482399 174483005 -28602527 - HUERS-P2 LTR ERV1 -1708 1380 769 733 250 16 5 chr5 174483005 174483189 -28602343 - HUERS-P2 LTR ERV1 -2281 807 622 508 200 7 71 chr5 174483167 174483307 -28602225 - HUERS-P2 LTR ERV1 -2953 135 5 * 463 203 125 39 chr5 174483398 174483581 -28601951 - LTR1B LTR ERV1 -329 497 343 427 278 110 17 chr5 174483680 174483853 -28601679 - LTR1 LTR ERV1 -569 216 28 6595 154 77 7 chr5 174483853 174486210 -28599322 + L1MA4A LINE L1 3788 6299 0 3467 153 49 20 chr5 174486210 174486562 -28598970 + L1MA5 LINE L1 5593 5933 -367 8624 118 8 14 chr5 174486562 174487854 -28597678 + HSMAR1 DNA Mariner 2 1286 -1 3467 153 49 20 chr5 174487854 174488184 -28597348 + L1MA5 LINE L1 5933 6300 0 285 98 0 0 chr5 174488532 174488573 -28596959 + (TG)n Simple_repeat Simple_repeat 2 42 0 496 317 75 27 chr5 174488655 174488938 -28596594 - L1MC4a LINE L1 -1919 5889 5586 1979 143 51 11 chr5 174488938 174489288 -28596244 - THE1B LTR MaLR 0 364 1 496 317 75 27 chr5 174489288 174489335 -28596197 - L1MC4a LINE L1 -2222 5586 5543 3117 207 63 6 chr5 174489421 174490111 -28595421 - L1MA9 LINE L1 -149 6163 5514 499 138 0 0 chr5 174490111 174490191 -28595341 + MADE1 DNA Mariner 1 80 0 3117 207 63 6 chr5 174490191 174490837 -28594695 - L1MA9 LINE L1 -798 5514 4744 203 182 23 0 chr5 174490879 174490923 -28594609 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 205 397 43 14 chr5 174491078 174491219 -28594313 + MIR SINE MIR 8 152 -110 608 217 14 7 chr5 174492180 174492323 -28593209 + MIR SINE MIR 90 233 -29 238 333 26 0 chr5 174492411 174492489 -28593043 - MIR SINE MIR -117 145 66 266 224 27 109 chr5 174492709 174492856 -28592676 - L2 LINE L2 -75 3238 3104 885 201 221 0 chr5 174492892 174493091 -28592441 + MIR SINE MIR 8 250 -12 2224 133 0 0 chr5 174493131 174493432 -28592100 + AluSx SINE Alu 1 301 -11 503 303 26 0 chr5 174493433 174493585 -28591947 - L2 LINE L2 -333 2980 2825 1075 245 180 21 chr5 174494645 174495078 -28590454 - MLT1H1 LTR MaLR -53 502 1 283 216 102 23 chr5 174495362 174495450 -28590082 - MIR3 SINE MIR -54 154 60 24 85 0 0 chr5 174496179 174496238 -28589294 + AT_rich Low_complexity Low_complexity 1 59 0 263 264 83 0 chr5 174496252 174496324 -28589208 - MIR3 SINE MIR -11 197 120 355 301 15 44 chr5 174496352 174496488 -28589044 + MIR SINE MIR 81 212 -50 539 240 55 14 chr5 174497374 174497520 -28588012 - MIR SINE MIR -1 261 110 869 171 46 0 chr5 174497721 174497896 -28587636 - MER20 DNA MER1_type 0 219 37 625 265 137 52 chr5 174498079 174498501 -28587031 + L2 LINE L2 2856 3313 0 313 329 20 46 chr5 174498591 174498743 -28586789 + MER5A DNA MER1_type 5 152 -37 201 279 51 25 chr5 174499026 174499105 -28586427 - MIR SINE MIR -99 163 83 604 278 159 18 chr5 174499293 174499520 -28586012 + MIR SINE MIR 4 262 0 214 356 129 10 chr5 174499537 174499638 -28585894 + L2 LINE L2 3158 3270 -2 * 243 266 63 13 chr5 174499636 174499715 -28585817 - MIR SINE MIR -129 133 51 231 36 0 0 chr5 174499722 174499750 -28585782 + (T)n Simple_repeat Simple_repeat 1 28 0 29403 27 0 0 chr5 174499775 174504235 -28581297 - L1PA2 LINE L1 0 6155 1694 970 106 0 0 chr5 174504593 174504735 -28580797 - L1MA6 LINE L1 -1 6299 6158 317 339 8 8 chr5 174505225 174505343 -28580189 - MIR3 SINE MIR -7 201 84 240 86 0 0 chr5 174505883 174505918 -28579614 + (CA)n Simple_repeat Simple_repeat 2 36 0 664 289 66 5 chr5 174506331 174506542 -28578990 - MIR SINE MIR -14 248 25 2140 247 65 2 chr5 174506644 174507275 -28578257 - L1MD2 LINE L1 -239 6120 5450 320 242 0 11 chr5 174507313 174507408 -28578124 - L1MD2 LINE L1 -1022 5124 5031 4806 107 8 29 chr5 174507409 174508206 -28577326 + L1PA16 LINE L1 5387 6166 0 699 204 28 6 chr5 174508222 174508403 -28577129 - L1MD2 LINE L1 -1106 5040 4856 752 231 15 5 chr5 174508417 174508616 -28576916 + L1MB7 LINE L1 5984 6184 0 278 231 9 19 chr5 174508670 174508778 -28576754 + (TA)n Simple_repeat Simple_repeat 1 107 0 349 310 0 10 chr5 174509029 174509129 -28576403 + L2 LINE L2 2574 2672 -642 3672 207 46 5 chr5 174509139 174510470 -28575062 - L1MB8 LINE L1 -9 6169 4788 357 282 153 21 chr5 174510473 174510714 -28574818 + L2 LINE L2 2664 2936 -378 412 240 146 53 chr5 174510807 174510978 -28574554 + L2 LINE L2 3119 3305 -8 459 272 49 25 chr5 174511670 174511832 -28573700 + MIR SINE MIR 6 171 -91 631 225 51 34 chr5 174511925 174512103 -28573429 - MIR SINE MIR -64 198 18 314 323 11 11 chr5 174512257 174512350 -28573182 - L2 LINE L2 -34 3238 3146 191 322 0 0 chr5 174512345 174512404 -28573128 + MIR SINE MIR 177 235 -27 * 729 78 0 0 chr5 174512631 174512734 -28572798 + AluY SINE Alu 206 308 -3 1878 148 32 9 chr5 174513872 174514210 -28571322 + MER7A DNA MER2_type 2 345 -1 22 35 0 0 chr5 174514266 174514295 -28571237 + AT_rich Low_complexity Low_complexity 1 29 0 444 261 124 20 chr5 174514305 174514458 -28571074 - MIR SINE MIR -82 180 12 1914 243 75 14 chr5 174514467 174515055 -28570477 + MLT1E3 LTR MaLR 1 624 0 507 280 119 43 chr5 174515055 174515826 -28569706 - L1ME4a LINE L1 -27 6094 5265 1458 259 27 85 chr5 174517071 174517372 -28568160 - MLT1G LTR MaLR -29 561 309 489 34 0 0 chr5 174517372 174517431 -28568101 + (TA)n Simple_repeat Simple_repeat 1 59 0 1458 259 27 85 chr5 174517431 174517715 -28567817 - MLT1G LTR MaLR -281 309 10 1067 296 80 14 chr5 174517722 174518161 -28567371 - LTR16C LTR ERVL -20 471 4 297 378 18 0 chr5 174518217 174518328 -28567204 + L2 LINE L2 3129 3241 -31 256 351 105 21 chr5 174518466 174518705 -28566827 + L2 LINE L2 2380 2638 -676 3052 91 2 0 chr5 174518826 174519279 -28566253 + L1P LINE L1 4886 5339 -807 192 343 47 47 chr5 174519389 174519561 -28565971 + L2 LINE L2 2899 3070 -202 222 242 30 15 chr5 174520762 174520804 -28564728 + GA-rich Low_complexity Low_complexity 2 47 -21 7426 34 2 9 chr5 174520804 174521872 -28563660 + L1PA5 LINE L1 5091 6152 -2 222 242 30 15 chr5 174521872 174521895 -28563637 + GA-rich Low_complexity Low_complexity 47 68 0 2220 265 38 31 chr5 174522129 174522996 -28562536 - L1ME LINE L1 -5177 893 21 21 0 0 0 chr5 174523420 174523441 -28562091 + AT_rich Low_complexity Low_complexity 1 21 0 239 212 71 24 chr5 174524329 174524414 -28561118 + MER102b DNA MER1_type 248 336 -5 1852 170 7 0 chr5 174525147 174525435 -28560097 - AluSx SINE Alu -12 300 11 400 266 29 7 chr5 174525605 174525744 -28559788 + L1ME LINE L1 5660 5801 -320 244 359 0 0 chr5 174525830 174525908 -28559624 - L2 LINE L2 -560 2754 2677 347 280 30 71 chr5 174526794 174526873 -28558659 + MIR SINE MIR 21 102 -147 6122 146 64 50 chr5 174526873 174528133 -28557399 - MER52C LTR ERV1 0 1278 1 347 280 30 71 chr5 174528133 174528218 -28557314 + MIR SINE MIR 102 188 -61 1866 153 13 22 chr5 174528230 174528544 -28556988 - AluJb SINE Alu -1 311 1 1921 151 20 3 chr5 174528554 174528846 -28556686 - AluSx SINE Alu -15 297 1 213 385 10 0 chr5 174530452 174530548 -28554984 + MIR SINE MIR 21 117 -91 3280 225 48 31 chr5 174530562 174531405 -28554127 + L1ME1 LINE L1 4739 5614 -552 1489 193 43 7 chr5 174531405 174531706 -28553826 - AluJo SINE Alu 0 312 1 3280 225 48 31 chr5 174531706 174532264 -28553268 + L1ME1 LINE L1 5614 6161 -5 2256 105 7 0 chr5 174532370 174532674 -28552858 - AluSp SINE Alu -7 306 1 903 236 61 18 chr5 174532675 174532904 -28552628 - LTR40a LTR ERVL -269 250 12 262 333 99 23 chr5 174532951 174533122 -28552410 + MIR SINE MIR 29 212 -50 804 221 27 101 chr5 174534930 174535228 -28550304 + Charlie8 DNA MER1_type 1 276 -2141 374 249 10 15 chr5 174536377 174536591 -28548941 + CT-rich Low_complexity Low_complexity 1 212 0 183 260 180 0 chr5 174537241 174537291 -28548241 - MER5B DNA MER1_type -61 117 59 337 328 40 24 chr5 174538240 174538365 -28547167 - L2 LINE L2 -4 3268 3142 2172 228 64 58 chr5 174538592 174538815 -28546717 + L1ME1 LINE L1 5398 5618 -548 1665 180 17 7 chr5 174538815 174539110 -28546422 + AluJo SINE Alu 1 298 -14 2172 228 64 58 chr5 174539110 174539605 -28545927 + L1ME1 LINE L1 5618 6120 -46 251 207 253 0 chr5 174539549 174539636 -28545896 + L1MA10 LINE L1 6224 6332 -2 * 316 310 18 58 chr5 174539692 174539863 -28545669 + MIR SINE MIR 20 183 -79 410 341 97 77 chr5 174540399 174540830 -28544702 + L2 LINE L2 2813 3252 -20 667 264 0 0 chr5 174540928 174541083 -28544449 - MIR SINE MIR -93 169 15 190 255 0 0 chr5 174541113 174541160 -28544372 + MIR3 SINE MIR 160 206 -2 202 234 0 0 chr5 174541725 174541772 -28543760 + T-rich Low_complexity Low_complexity 1 47 0 1850 164 0 0 chr5 174541804 174542078 -28543454 - AluJo SINE Alu -38 274 1 460 268 170 10 chr5 174542157 174542351 -28543181 - MIR SINE MIR -9 253 29 357 342 25 0 chr5 174542493 174542613 -28542919 + MER5C DNA MER1_type 1 123 -201 210 241 0 0 chr5 174542643 174542697 -28542835 + MER5C DNA MER1_type 220 273 -51 508 276 144 0 chr5 174542851 174543025 -28542507 + MIR SINE MIR 54 252 -10 851 213 27 22 chr5 174543453 174543636 -28541896 + MIR SINE MIR 7 190 -72 218 219 16 0 chr5 174543796 174543860 -28541672 + (CATA)n Simple_repeat Simple_repeat 4 68 0 566 211 60 21 chr5 174544402 174544561 -28540971 + L1MD3 LINE L1 6678 6888 -1107 2974 190 30 13 chr5 174544573 174545173 -28540359 + L1MA4 LINE L1 5685 6294 -6 229 317 24 12 chr5 174545285 174545367 -28540165 - L3b LINE CR1 -115 1468 1386 3432 228 25 22 chr5 174545511 174546403 -28539129 + L1MC3 LINE L1 6872 7765 -20 234 0 0 0 chr5 174546408 174546434 -28539098 + (TA)n Simple_repeat Simple_repeat 2 27 0 3302 241 125 31 chr5 174546987 174547980 -28537552 + L2 LINE L2 1944 3075 -238 615 163 169 30 chr5 174547980 174548146 -28537386 - MER53 DNA DNA 0 189 1 3302 241 125 31 chr5 174548146 174548410 -28537122 + L2 LINE L2 3075 3313 0 339 248 139 2 chr5 174548474 174548606 -28536926 - MIR SINE MIR -78 184 37 2765 223 13 27 chr5 174548720 174549431 -28536101 - L1MC3 LINE L1 -246 7539 6872 552 311 77 8 chr5 174550168 174550403 -28535129 + MIR SINE MIR 3 253 -9 185 318 0 16 chr5 174550709 174550772 -28534760 + MIR SINE MIR 90 151 -111 399 305 68 34 chr5 174552267 174552558 -28532974 + L2 LINE L2 2758 3058 -255 260 274 0 14 chr5 174552641 174552714 -28532818 + MER20 DNA MER1_type 1 72 -147 320 281 36 72 chr5 174552863 174552891 -28532641 + L2 LINE L2 3139 3166 -106 2158 188 137 7 chr5 174552891 174553338 -28532194 - MLT1D LTR MaLR 0 505 1 320 281 36 72 chr5 174553338 174553448 -28532084 + L2 LINE L2 3166 3272 0 1637 206 5 86 chr5 174553862 174554259 -28531273 - MLT1A1 LTR MaLR 0 365 1 221 348 34 56 chr5 174555409 174555587 -28529945 + MIR3 SINE MIR 4 177 -31 558 220 126 51 chr5 174555781 174555947 -28529585 + MIR SINE MIR 29 216 -46 14362 144 54 6 chr5 174555947 174558253 -28527279 + Tigger1 DNA MER2_type 1 2417 -1 558 220 126 51 chr5 174558253 174558300 -28527232 + MIR SINE MIR 216 258 -4 359 322 42 59 chr5 174558347 174558636 -28526896 + MLT1K LTR MaLR 282 565 -23 199 367 0 0 chr5 174558645 174558705 -28526827 + L3 LINE CR1 1518 1577 0 676 269 51 55 chr5 174558945 174559308 -28526224 + L1ME LINE L1 5385 5743 -421 24 53 0 0 chr5 174559376 174559414 -28526118 + AT_rich Low_complexity Low_complexity 1 38 0 770 167 0 6 chr5 174559442 174559604 -28525928 + GA-rich Low_complexity Low_complexity 1 161 0 257 164 0 18 chr5 174559925 174559980 -28525552 + (TG)n Simple_repeat Simple_repeat 2 55 0 718 270 69 33 chr5 174560027 174560331 -28525201 - L2 LINE L2 -472 2842 2528 2808 116 3 11 chr5 174560370 174560748 -28524784 - THE1C LTR MaLR 0 375 1 535 299 39 26 chr5 174563202 174563433 -28522099 + MIR SINE MIR 27 260 -2 204 343 111 0 chr5 174563466 174563565 -28521967 + L2 LINE L2 3138 3247 -25 21 57 0 0 chr5 174564531 174564566 -28520966 + AT_rich Low_complexity Low_complexity 1 35 0 700 298 71 62 chr5 174564887 174565437 -28520095 - LTR67 LTR ERVL 0 557 3 522 307 7 20 chr5 174565531 174565681 -28519851 + MIR SINE MIR 9 156 -106 1111 273 125 25 chr5 174565796 174566228 -28519304 + MLT1K LTR MaLR 1 475 -1 654 277 95 17 chr5 174567094 174567325 -28518207 - MIR SINE MIR -2 260 12 787 287 84 42 chr5 174567980 174568548 -28516984 - L2 LINE L2 -25 3288 2707 589 276 25 20 chr5 174568977 174569176 -28516356 + MIR SINE MIR 20 219 -43 1555 209 33 0 chr5 174569347 174569649 -28515883 + MER58B DNA MER1_type 29 340 -1 573 335 30 0 chr5 174570506 174570703 -28514829 - MIR SINE MIR -25 237 35 2386 213 106 0 chr5 174571240 174571447 -28514085 - L1ME2 LINE L1 -9 6155 5949 693 322 116 7 chr5 174571447 174571860 -28513672 - L1MA5A LINE L1 -370 5927 5470 1821 177 3 3 chr5 174572646 174572951 -28512581 - AluJb SINE Alu -7 305 1 310 313 88 62 chr5 174573328 174573520 -28512012 - MIR SINE MIR -2 260 64 222 37 0 0 chr5 174573761 174573788 -28511744 + (TG)n Simple_repeat Simple_repeat 2 28 0 278 259 9 56 chr5 174573789 174573897 -28511635 - MIR SINE MIR -67 195 93 5179 115 138 97 chr5 174573987 174575509 -28510023 + pTR5 LTR ERV1 375 2438 0 210 162 0 0 chr5 174575571 174575608 -28509924 + (TAA)n Simple_repeat Simple_repeat 1 37 0 324 244 0 23 chr5 174575621 174575707 -28509825 - MIR SINE MIR -77 185 102 23 0 0 0 chr5 174575986 174576009 -28509523 + AT_rich Low_complexity Low_complexity 1 23 0 394 217 33 0 chr5 174576368 174576460 -28509072 - MER53 DNA DNA -94 95 1 528 243 68 94 chr5 174576462 174576697 -28508835 + MIR SINE MIR 32 260 -2 491 318 24 58 chr5 174576867 174577122 -28508410 - MIR3 SINE MIR -5 257 14 190 304 18 0 chr5 174577144 174577200 -28508332 - L2 LINE L2 -86 3227 3171 267 209 0 121 chr5 174577850 174577941 -28507591 + MIR3 SINE MIR 124 203 -5 2618 174 78 9 chr5 174578025 174578549 -28506983 - L1MB4 LINE L1 -34 6146 5587 582 347 38 30 chr5 174578644 174578906 -28506626 - L2 LINE L2 -15 3257 2994 936 239 60 0 chr5 174578911 174579112 -28506420 + MER58A DNA MER1_type 6 218 -6 638 107 19 10 chr5 174579234 174579337 -28506195 + L1MB4 LINE L1 5799 5902 -278 1165 245 76 51 chr5 174579338 174579769 -28505763 - MLT1C LTR MaLR -19 481 1 196 356 34 8 chr5 174579769 174579887 -28505645 - L2 LINE L2 -404 2910 2790 241 322 72 33 chr5 174581798 174581885 -28503647 - L2 LINE L2 -19 3253 3156 960 200 85 0 chr5 174581885 174582085 -28503447 - MER20 DNA MER1_type 0 219 3 241 322 72 33 chr5 174582085 174582149 -28503383 - L2 LINE L2 -116 3156 3096 219 340 160 0 chr5 174582320 174582414 -28503118 - L2 LINE L2 -1 3271 3163 850 264 16 24 chr5 174582432 174582678 -28502854 + MIR SINE MIR 18 261 -1 624 251 46 17 chr5 174583127 174583302 -28502230 + L3b LINE CR1 1202 1381 -202 1105 199 9 5 chr5 174583569 174583785 -28501747 + MER20 DNA MER1_type 2 218 -1 668 260 99 5 chr5 174583883 174584075 -28501457 + MLT1I LTR MaLR 1 210 -199 618 307 98 4 chr5 174584268 174584493 -28501039 + MIR SINE MIR 8 253 -9 * 854 249 57 9 chr5 174584443 174584672 -28500860 - MIR SINE MIR -17 245 6 1698 132 21 94 chr5 174586146 174586486 -28499046 - AluYb8 SINE Alu -2 316 2 201 312 91 26 chr5 174586556 174586633 -28498899 + L2 LINE L2 3099 3180 -92 199 295 95 0 chr5 174587669 174587764 -28497768 - MIR3 SINE MIR -14 194 91 228 329 13 0 chr5 174588111 174588187 -28497345 + L1ME LINE L1 366 442 -5954 330 388 12 0 chr5 174588459 174588624 -28496908 + L1ME LINE L1 764 930 -5466 321 293 65 8 chr5 174588856 174588979 -28496553 + L1ME LINE L1 1168 1297 -5112 503 255 62 76 chr5 174589056 174589294 -28496238 + L1ME LINE L1 1450 1690 -4897 1491 154 14 57 chr5 174589294 174589574 -28495958 + AluSx SINE Alu 33 300 -12 503 255 62 76 chr5 174589574 174589749 -28495783 + L1ME LINE L1 1690 1856 -4731 2902 13 0 0 chr5 174589749 174590067 -28495465 + AluYb8 SINE Alu 1 318 0 503 255 62 76 chr5 174590067 174590204 -28495328 + L1ME LINE L1 1856 1993 -4594 270 170 248 71 chr5 174590521 174590662 -28494870 - MLT1H LTR MaLR -245 304 139 209 325 26 0 chr5 174590681 174590758 -28494774 - L2 LINE L2 -1000 2314 2236 4944 118 36 37 chr5 174590763 174590794 -28494738 + L1PA16 LINE L1 5304 5334 -832 2355 74 10 19 chr5 174590794 174591105 -28494427 + AluY SINE Alu 1 308 -3 4944 118 36 37 chr5 174591105 174591437 -28494095 + L1PA16 LINE L1 5334 5665 -501 2926 123 12 2 chr5 174591437 174591861 -28493671 + MSTA LTR MaLR 1 428 0 4944 118 36 37 chr5 174591861 174592351 -28493181 + L1PA16 LINE L1 5665 6157 -9 183 100 0 0 chr5 174592353 174592383 -28493149 + (CATA)n Simple_repeat Simple_repeat 2 31 0 292 305 33 16 chr5 174592574 174592699 -28492833 + MIR SINE MIR 56 185 -67 627 161 19 180 chr5 174593019 174593082 -28492450 - MIR SINE MIR -72 190 119 6993 172 16 19 chr5 174593082 174593900 -28491632 - L1PA15 LINE L1 -3 6162 5343 1972 153 0 3 chr5 174593900 174594195 -28491337 + AluJb SINE Alu 3 296 -16 6993 172 16 19 chr5 174594195 174595576 -28489956 - L1PA15 LINE L1 -822 5343 3955 627 161 19 180 chr5 174595576 174595723 -28489809 - MIR SINE MIR -143 119 14 1220 145 115 75 chr5 174596259 174596706 -28488826 - MER51A LTR ERV1 0 634 2 967 225 83 70 chr5 174596707 174596986 -28488546 - MER113 DNA MER1_type? -52 469 179 1766 156 29 0 chr5 174596986 174597281 -28488251 - AluSx SINE Alu 0 303 1 967 225 83 70 chr5 174597281 174597457 -28488075 - MER113 DNA MER1_type? -342 179 7 210 372 131 29 chr5 174597508 174597852 -28487680 + L3 LINE CR1 1041 1419 -158 203 321 44 57 chr5 174597841 174598000 -28487532 + MIR3 SINE MIR 6 162 -46 * 1451 165 71 3 chr5 174599229 174599526 -28486006 + MER33 DNA MER1_type 1 317 -7 323 328 15 8 chr5 174599543 174599677 -28485855 - MIR3 SINE MIR -41 167 33 207 283 115 21 chr5 174599711 174599878 -28485654 + MIR SINE MIR 20 203 -59 267 31 0 0 chr5 174599980 174600012 -28485520 + (CCA)n Simple_repeat Simple_repeat 1 32 0 612 208 139 0 chr5 174600018 174600162 -28485370 + MIR SINE MIR 99 262 0 558 147 17 9 chr5 174600860 174600976 -28484556 + CT-rich Low_complexity Low_complexity 3 119 0 228 303 15 0 chr5 174601085 174601151 -28484381 + CT-rich Low_complexity Low_complexity 2 68 0 280 331 200 0 chr5 174601332 174601462 -28484070 + MIR SINE MIR 46 201 -61 1378 73 0 6 chr5 174601465 174601710 -28483822 + AluY SINE Alu 1 291 -20 232 379 45 8 chr5 174602192 174602324 -28483208 + L2 LINE L2 2805 2941 -373 459 308 72 0 chr5 174602522 174602717 -28482815 + MIR SINE MIR 2 210 -52 4671 182 20 7 chr5 174602723 174603023 -28482509 + L1MB7 LINE L1 5184 5479 -705 785 145 15 15 chr5 174603023 174603154 -28482378 + FLAM_C SINE Alu 3 133 0 4671 182 20 7 chr5 174603154 174603821 -28481711 + L1MB7 LINE L1 5479 6162 -22 242 345 35 28 chr5 174604425 174604567 -28480965 + MIR SINE MIR 36 178 -84 28 0 0 0 chr5 174604831 174604859 -28480673 + AT_rich Low_complexity Low_complexity 1 28 0 827 307 89 43 chr5 174604948 174605998 -28479534 + L1M4 LINE L1 3504 4602 -1544 463 271 123 38 chr5 174606034 174606326 -28479206 + L1M4 LINE L1 4768 5084 -1062 582 219 68 162 chr5 174606388 174606653 -28478879 - MLT1E LTR MaLR -353 240 1 407 283 78 25 chr5 174607303 174607547 -28477985 - MIR SINE MIR -2 260 4 192 226 60 135 chr5 174607676 174607725 -28477807 + MIR SINE MIR 66 117 -145 366 23 0 0 chr5 174607725 174607768 -28477764 + (TC)n Simple_repeat Simple_repeat 2 44 0 444 285 0 49 chr5 174607768 174607891 -28477641 - FLAM_A SINE Alu -15 118 2 192 226 60 135 chr5 174607891 174607973 -28477559 + MIR SINE MIR 115 188 -74 519 299 40 61 chr5 174608877 174609608 -28475924 + L1MEd LINE L1 527 1281 -4876 299 282 124 52 chr5 174609631 174609922 -28475610 + L1MEd LINE L1 87 398 -6025 2143 129 13 0 chr5 174610013 174610315 -28475217 + AluSq SINE Alu 1 306 -7 8429 196 62 39 chr5 174610329 174611788 -28473744 + L1PA16 LINE L1 2506 3931 -2235 2226 80 3 14 chr5 174611788 174612077 -28473455 + AluY SINE Alu 1 286 -25 341 21 0 21 chr5 174612080 174612127 -28473405 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 8429 196 62 39 chr5 174612127 174614105 -28471427 + L1PA16 LINE L1 3932 6030 -136 2395 80 10 13 chr5 174614105 174614417 -28471115 + AluY SINE Alu 1 311 0 8429 196 62 39 chr5 174614417 174614557 -28470975 + L1PA16 LINE L1 6030 6165 -1 344 266 113 0 chr5 174614550 174614824 -28470708 + L1MEd LINE L1 3876 4180 -2761 * 2592 163 30 7 chr5 174614845 174615280 -28470252 + MER54A LTR ERVL 1 445 -456 387 271 89 21 chr5 174615306 174615708 -28469824 + L1MEd LINE L1 4187 4638 -2303 677 154 29 7 chr5 174615714 174615850 -28469682 + L1MD3 LINE L1 7845 7983 -12 681 311 52 23 chr5 174615860 174616308 -28469224 + L1MEd LINE L1 4646 5110 -1831 2447 57 0 13 chr5 174616308 174616606 -28468926 - AluY SINE Alu -15 296 3 681 311 52 23 chr5 174616606 174616639 -28468893 + L1MEd LINE L1 5110 5141 -1800 1051 267 77 3 chr5 174616660 174617050 -28468482 + L1MEd LINE L1 5192 5610 -1331 296 324 55 50 chr5 174617393 174617575 -28467957 + LTR16C LTR ERVL 309 491 0 2066 255 36 20 chr5 174617594 174618650 -28466882 + L1MEd LINE L1 5681 6757 -208 260 209 90 0 chr5 174618771 174618838 -28466694 + L1ME3A LINE L1 6816 6888 -77 1170 146 32 139 chr5 174618842 174619239 -28466293 - Tigger7 DNA MER2_type 0 2587 183 1143 231 77 90 chr5 174619440 174619972 -28465560 - LTR1B LTR ERV1 -301 525 1 738 196 26 26 chr5 174619982 174620135 -28465397 - Tigger7 DNA MER2_type -580 153 1 1175 178 73 41 chr5 174621362 174621676 -28463856 - MER33 DNA MER1_type 0 324 1 295 262 24 12 chr5 174621732 174621816 -28463716 + MIR SINE MIR 178 262 0 226 184 0 20 chr5 174621816 174621865 -28463667 + (TTA)n Simple_repeat Simple_repeat 2 49 0 231 229 76 25 chr5 174622016 174622134 -28463398 + MER113 DNA MER1_type? 1 124 -397 25 51 0 0 chr5 174622218 174622257 -28463275 + AT_rich Low_complexity Low_complexity 1 39 0 618 264 48 0 chr5 174622341 174622508 -28463024 + MIR SINE MIR 52 226 -36 285 341 123 12 chr5 174622588 174622758 -28462774 - MIR SINE MIR -72 190 2 208 135 0 0 chr5 174623506 174623543 -28461989 + (TATAA)n Simple_repeat Simple_repeat 1 37 0 1476 199 40 57 chr5 174623896 174624076 -28461456 + MLT1A1 LTR MaLR 1 182 -183 351 0 0 0 chr5 174624076 174624115 -28461417 + (TC)n Simple_repeat Simple_repeat 1 39 0 1476 199 40 57 chr5 174624115 174624305 -28461227 + MLT1A1 LTR MaLR 182 365 0 23 0 0 0 chr5 174624841 174624864 -28460668 + AT_rich Low_complexity Low_complexity 1 23 0 2143 112 0 0 chr5 174624864 174625142 -28460390 - AluSg SINE Alu -32 278 1 1823 152 43 12 chr5 174625500 174625822 -28459710 + MER2 DNA MER2_type 14 345 0 183 241 19 37 chr5 174625949 174626003 -28459529 - L3 LINE CR1 -11 1566 1514 208 301 0 72 chr5 174626039 174626078 -28459454 - L3 LINE CR1 -450 1127 1096 730 156 126 0 chr5 174626078 174626245 -28459287 + MER53 DNA DNA 1 188 -1 208 301 0 72 chr5 174626245 174626288 -28459244 - L3 LINE CR1 -481 1096 1051 261 339 42 25 chr5 174626423 174626541 -28458991 - MIR SINE MIR -136 126 7 343 302 79 43 chr5 174626816 174626955 -28458577 + L2 LINE L2 3127 3270 -2 254 279 108 27 chr5 174627484 174627595 -28457937 + MIR3 SINE MIR 40 159 -49 327 281 16 47 chr5 174627674 174627802 -28457730 + MER103 DNA DNA 3 126 -40 225 236 55 0 chr5 174627803 174627858 -28457674 + MIR SINE MIR 156 213 -49 207 100 0 0 chr5 174628379 174628409 -28457123 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 257 339 65 77 chr5 174628410 174628670 -28456862 - L2 LINE L2 -12 3260 3004 183 306 122 31 chr5 174628788 174628886 -28456646 + MIR SINE MIR 47 153 -109 323 281 0 0 chr5 174628906 174628995 -28456537 - MIR SINE MIR -2 260 172 497 259 7 43 chr5 174629109 174629248 -28456284 - MIR SINE MIR -111 151 18 186 283 0 22 chr5 174629302 174629348 -28456184 - L2 LINE L2 -11 3302 3258 * 742 278 107 19 chr5 174629321 174629537 -28455995 - MIR SINE MIR -23 239 5 2520 59 0 19 chr5 174629848 174630155 -28455377 + AluY SINE Alu 1 301 -10 432 300 101 13 chr5 174630937 174631174 -28454358 - MIR SINE MIR 0 262 5 1048 261 83 20 chr5 174631586 174632045 -28453487 + MLT1K LTR MaLR 22 580 -8 2075 103 3 43 chr5 174632616 174632916 -28452616 + AluSc SINE Alu 1 288 -21 210 71 0 0 chr5 174633516 174633544 -28451988 + (CA)n Simple_repeat Simple_repeat 1 28 0 2109 93 7 0 chr5 174634579 174634883 -28450649 + AluY SINE Alu 1 306 0 523 268 115 66 chr5 174635245 174635407 -28450125 - MIR SINE MIR 0 262 83 1778 178 0 7 chr5 174635407 174635694 -28449838 - AluJo SINE Alu -21 291 7 523 268 115 66 chr5 174635694 174635774 -28449758 - MIR SINE MIR -179 83 8 258 340 0 0 chr5 174635939 174636036 -28449496 + MER103 DNA DNA 8 104 -62 2204 110 7 0 chr5 174636489 174636788 -28448744 - AluSx SINE Alu -11 301 1 197 387 32 0 chr5 174636789 174636882 -28448650 + L2 LINE L2 3177 3272 0 9630 164 83 16 chr5 174637114 174638841 -28446691 + L1MA3 LINE L1 11 1853 -5712 15980 152 17 9 chr5 174638846 174643319 -28442213 + L1MA3 LINE L1 3208 7724 0 1624 184 0 4 chr5 174643464 174643730 -28441802 + AluJb SINE Alu 3 267 -45 1660 194 115 10 chr5 174643889 174644307 -28441225 + MLT1C LTR MaLR 6 467 0 929 304 46 35 chr5 174644307 174644663 -28440869 - LTR16B LTR ERVL -40 424 65 690 258 36 89 chr5 174644779 174645027 -28440505 + MIR SINE MIR 1 235 -27 200 167 0 19 chr5 174645061 174645115 -28440417 + (TTA)n Simple_repeat Simple_repeat 3 55 0 2346 152 12 8 chr5 174645358 174645759 -28439773 + MER57A LTR ERV1 1 403 0 275 337 39 45 chr5 174645796 174646046 -28439486 + L2 LINE L2 2786 3047 -225 263 259 49 0 chr5 174646049 174646130 -28439402 + L2 LINE L2 2304 2388 -926 381 288 8 0 chr5 174646253 174646371 -28439161 + MLT1K LTR MaLR 470 588 0 213 94 0 0 chr5 174646374 174646406 -28439126 + (CAT)n Simple_repeat Simple_repeat 2 33 0 869 280 53 50 chr5 174646878 174647256 -28438276 + MLT1K LTR MaLR 191 569 -19 302 233 67 33 chr5 174647657 174647807 -28437725 - L1ME4a LINE L1 -200 5921 5767 630 37 0 12 chr5 174648559 174648641 -28436891 - L1PA5 LINE L1 -2 6152 6072 244 159 23 0 chr5 174650073 174650117 -28435415 - MADE1 DNA Mariner -33 47 3 26 0 0 0 chr5 174650586 174650612 -28434920 + AT_rich Low_complexity Low_complexity 1 26 0 551 324 77 5 chr5 174650879 174651101 -28434431 - MIR SINE MIR -23 239 2 343 274 36 0 chr5 174651892 174651976 -28433556 + MIR SINE MIR 57 143 -65 477 290 107 31 chr5 174652917 174653141 -28432391 + Charlie8 DNA MER1_type 4 244 -2173 518 279 0 45 chr5 174653245 174653424 -28432108 + Charlie8 DNA MER1_type 373 543 -1874 188 234 172 16 chr5 174653489 174653553 -28431979 - MIR3 SINE MIR -50 158 85 1509 204 48 20 chr5 174654064 174654241 -28431291 - MLT1A2 LTR MaLR -11 363 192 306 0 0 0 chr5 174654241 174654275 -28431257 + (GA)n Simple_repeat Simple_repeat 2 35 0 1509 204 48 20 chr5 174654275 174654450 -28431082 - MLT1A2 LTR MaLR -182 192 1 291 188 38 25 chr5 174654474 174654554 -28430978 + LTR16C LTR ERVL 411 491 0 349 267 11 0 chr5 174655131 174655221 -28430311 + MIR SINE MIR 57 147 -61 322 385 40 6 chr5 174655223 174655397 -28430135 - L3 LINE CR1 -10 1567 1388 195 129 0 0 chr5 174655450 174655481 -28430051 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 1945 138 29 35 chr5 174655881 174656258 -28429274 + THE1C LTR MaLR 1 375 0 1394 295 138 21 chr5 174657232 174658321 -28427211 - L1MEd LINE L1 -1831 4298 3083 821 276 80 21 chr5 174658375 174658506 -28427026 - L1MEd LINE L1 -3568 2561 2439 1302 236 7 20 chr5 174658506 174658802 -28426730 - AluJo SINE Alu -20 292 1 821 276 80 21 chr5 174658802 174659192 -28426340 - L1MEd LINE L1 -3690 2439 2057 387 274 64 98 chr5 174659417 174659678 -28425854 - L1MEd LINE L1 -4614 1696 1428 787 280 28 5 chr5 174659678 174659896 -28425636 + MER58A DNA MER1_type 1 223 -1 387 274 64 98 chr5 174659896 174660087 -28425445 - L1MEd LINE L1 -4882 1428 1232 1663 239 79 26 chr5 174660087 174660619 -28424913 - MLT1F1 LTR MaLR -4 563 4 2038 151 0 0 chr5 174660621 174660920 -28424612 - AluSx SINE Alu -11 301 3 387 274 64 98 chr5 174660920 174661437 -28424095 - L1MEd LINE L1 -5079 1231 709 600 297 67 58 chr5 174662816 174663351 -28422181 + MER34 LTR ERV1 3 542 0 217 345 181 0 chr5 174663660 174663776 -28421756 + MIR SINE MIR 1 137 -125 344 354 9 9 chr5 174663901 174664014 -28421518 - MIR3 SINE MIR -54 154 42 404 286 70 42 chr5 174664792 174665051 -28420481 + L1ME LINE L1 5554 5819 -302 441 323 26 42 chr5 174665618 174665810 -28419722 + L3 LINE CR1 1386 1574 -3 3555 154 25 15 chr5 174666747 174667427 -28418105 - L1MA4 LINE L1 -3 6297 5611 311 179 0 36 chr5 174667427 174667511 -28418021 + L1M1 LINE L1 3213 3293 -4272 198 103 0 0 chr5 174669060 174669089 -28416443 + (TC)n Simple_repeat Simple_repeat 2 30 0 1626 181 58 44 chr5 174670196 174670552 -28414980 + L1M1 LINE L1 3270 3645 -3920 219 69 0 0 chr5 174670552 174670581 -28414951 + (CA)n Simple_repeat Simple_repeat 2 30 0 1626 181 58 44 chr5 174670581 174670815 -28414717 + L1M1 LINE L1 3645 3874 -3691 24 0 0 0 chr5 174670872 174670896 -28414636 + AT_rich Low_complexity Low_complexity 1 24 0 249 272 11 0 chr5 174670904 174670996 -28414536 + L1ME LINE L1 4573 4665 -1481 735 154 7 29 chr5 174671023 174671159 -28414373 - MER89 LTR ERV1 -5 554 422 1148 248 27 3 chr5 174671160 174671458 -28414074 + L1ME LINE L1 5453 5757 -409 651 101 0 20 chr5 174671464 174671563 -28413969 + MER4A LTR ERV1 1 97 -567 1905 128 6 22 chr5 174671564 174671913 -28413619 + MER4A LTR ERV1 263 664 0 2228 210 23 4 chr5 174672023 174672543 -28412989 + L1M1 LINE L1 4117 4646 -2919 1802 198 37 3 chr5 174672753 174673106 -28412426 - MLT1A1 LTR MaLR 0 365 1 470 298 60 44 chr5 174673221 174673695 -28411837 + L1M2 LINE L1 5335 5714 -577 307 282 104 71 chr5 174673767 174674159 -28411373 - MLT1L LTR MaLR -2 522 186 22 94 0 0 chr5 174674234 174674298 -28411234 + AT_rich Low_complexity Low_complexity 1 64 0 31 26 0 0 chr5 174674492 174674530 -28411002 + AT_rich Low_complexity Low_complexity 1 38 0 622 249 65 0 chr5 174674631 174674816 -28410716 - MIR SINE MIR 0 262 66 1399 36 0 0 chr5 174674837 174675005 -28410527 + L1PA4 LINE L1 5985 6152 -3 385 308 53 8 chr5 174676928 174677061 -28408471 - MIR SINE MIR -110 152 14 208 253 23 46 chr5 174677136 174677223 -28408309 + GA-rich Low_complexity Low_complexity 6 90 0 387 98 0 0 chr5 174678253 174678314 -28407218 + (TC)n Simple_repeat Simple_repeat 2 62 0 583 14 0 0 chr5 174678409 174678481 -28407051 + L1PA3 LINE L1 6081 6152 -3 4996 158 40 9 chr5 174678542 174679508 -28406024 - L1MC1 LINE L1 -17 6316 5321 226 292 292 10 chr5 174680941 174681133 -28404399 + MIR SINE MIR 7 252 -10 252 406 0 8 chr5 174681232 174681365 -28404167 + L3 LINE CR1 677 808 -769 187 369 38 51 chr5 174681386 174681470 -28404062 - L2 LINE L2 -43 3229 3146 2209 167 50 19 chr5 174681470 174681889 -28403643 - MSTB1 LTR MaLR 0 432 1 187 369 38 51 chr5 174681889 174681961 -28403571 - L2 LINE L2 -126 3146 3075 684 320 88 51 chr5 174682230 174682717 -28402815 - L2 LINE L2 -5 3308 2804 1711 273 48 18 chr5 174682829 174683495 -28402037 + MER20B DNA MER1_type 97 782 -1 359 355 43 14 chr5 174683496 174683707 -28401825 - L2 LINE L2 -517 2797 2581 323 324 0 0 chr5 174683753 174683858 -28401674 - L3 LINE CR1 -308 1269 1165 249 139 0 0 chr5 174683858 174683894 -28401638 - U2 snRNA snRNA -152 36 1 424 353 77 27 chr5 174683895 174684156 -28401376 - L3 LINE CR1 -403 1174 901 204 222 19 19 chr5 174684592 174684646 -28400886 + MIR3 SINE MIR 154 207 -1 1906 234 63 40 chr5 174684731 174685282 -28400250 - MLT1G LTR MaLR 0 590 38 464 259 209 23 chr5 174686283 174686503 -28399029 - MIR SINE MIR 0 262 2 226 375 78 31 chr5 174686526 174686654 -28398878 - L2 LINE L2 -196 3076 2943 1591 176 24 39 chr5 174686655 174686985 -28398547 + L1MC1 LINE L1 5992 6316 -17 759 154 42 7 chr5 174686985 174687127 -28398405 + L1PB4 LINE L1 6008 6155 -1 246 265 145 0 chr5 174687191 174687274 -28398258 + L2 LINE L2 3191 3285 -28 417 277 123 45 chr5 174687287 174687507 -28398025 + MIR SINE MIR 8 244 -18 1556 185 35 0 chr5 174687830 174688117 -28397415 + MER7A DNA MER2_type 12 306 -40 185 354 118 8 chr5 174688150 174688277 -28397255 - MIR SINE MIR -113 149 9 295 224 188 0 chr5 174688703 174688788 -28396744 + MLT1J2 LTR MaLR 82 182 -268 252 176 122 54 chr5 174688921 174688995 -28396537 + MLT1J1 LTR MaLR 364 442 -4 263 356 103 0 chr5 174689161 174689248 -28396284 + L2 LINE L2 3198 3293 -20 322 239 7 187 chr5 174689427 174689582 -28395950 - L2 LINE L2 0 3313 3187 378 270 100 8 chr5 174690221 174690450 -28395082 - L2 LINE L2 -4 3309 3000 1183 173 96 110 chr5 174690450 174690930 -28394602 - MLT1E1 LTR MaLR -2 652 180 2723 140 9 4 chr5 174690999 174691455 -28394077 + LTR32 LTR ERVL 14 471 0 292 183 0 42 chr5 174691455 174691525 -28394007 - MLT1E1 LTR MaLR -583 71 5 232 280 13 0 chr5 174693204 174693279 -28392253 + (TA)n Simple_repeat Simple_repeat 2 77 0 22 56 0 0 chr5 174693566 174693602 -28391930 + AT_rich Low_complexity Low_complexity 1 36 0 761 299 151 9 chr5 174693647 174693965 -28391567 - L2 LINE L2 -7 3306 2944 667 257 6 0 chr5 174694019 174694194 -28391338 + L1MEc LINE L1 49 224 -6172 750 299 105 23 chr5 174694194 174694586 -28390946 - L2 LINE L2 -375 2939 2516 3245 246 74 34 chr5 174695268 174696607 -28388925 + L1MEc LINE L1 64 1456 -4940 496 223 10 10 chr5 174696667 174696770 -28388762 - MER5A DNA MER1_type -83 106 4 440 333 104 8 chr5 174697001 174697250 -28388282 + MLT1K LTR MaLR 14 286 -302 213 301 194 0 chr5 174698072 174698165 -28387367 + MIR3 SINE MIR 93 203 -5 403 313 60 53 chr5 174699848 174699998 -28385534 - L2 LINE L2 0 3272 3122 345 276 121 64 chr5 174700035 174700299 -28385233 + L2 LINE L2 3035 3313 0 329 343 30 0 chr5 174701714 174701848 -28383684 + MIR SINE MIR 125 262 0 1128 257 56 32 chr5 174701874 174702282 -28383250 - LTR16A LTR ERVL 0 450 33 258 333 32 21 chr5 174702335 174702428 -28383104 - MIR SINE MIR -92 116 23 432 0 0 0 chr5 174702682 174702730 -28382802 + (CA)n Simple_repeat Simple_repeat 2 49 0 428 278 60 8 chr5 174702738 174702871 -28382661 + MER5A DNA MER1_type 50 189 0 283 304 143 24 chr5 174702953 174703121 -28382411 - MIR3 SINE MIR -6 202 15 1747 133 50 56 chr5 174703393 174703770 -28381762 - THE1C LTR MaLR 0 375 1 1907 151 23 0 chr5 174704627 174704926 -28380606 + AluJb SINE Alu 6 311 -1 191 316 36 72 chr5 174705924 174706063 -28379469 - L2 LINE L2 -51 3221 3088 513 305 107 24 chr5 174706221 174706463 -28379069 - MIR SINE MIR -3 259 2 481 289 57 30 chr5 174706827 174707090 -28378442 + MLT1K LTR MaLR 313 582 -6 611 336 48 45 chr5 174707802 174708341 -28377191 - L2 LINE L2 -10 3303 2740 477 280 32 8 chr5 174708364 174708489 -28377043 - L2 LINE L2 -2 3311 3184 294 50 0 0 chr5 174708686 174708726 -28376806 + (T)n Simple_repeat Simple_repeat 1 40 0 441 0 0 0 chr5 174709073 174709122 -28376410 + (CA)n Simple_repeat Simple_repeat 2 50 0 580 282 90 26 chr5 174709510 174709744 -28375788 + MIR SINE MIR 2 250 -12 2480 146 44 7 chr5 174710410 174710821 -28374711 + MSTB LTR MaLR 1 426 0 8543 190 32 2 chr5 174710821 174712425 -28373107 + MSTB-int LTR MaLR 1 1651 0 2334 133 78 12 chr5 174712425 174712825 -28372707 + MSTB LTR MaLR 1 426 0 7015 28 0 0 chr5 174713664 174714486 -28371046 + L1PA4 LINE L1 5333 6154 -1 1709 220 13 46 chr5 174714519 174714819 -28370713 + L1ME1 LINE L1 5211 5519 -815 2133 184 76 5 chr5 174714819 174715255 -28370277 - MLT1C LTR MaLR 0 467 1 1709 220 13 46 chr5 174715255 174715818 -28369714 + L1ME1 LINE L1 5519 6333 -1 232 322 161 25 chr5 174716151 174716269 -28369263 - L2 LINE L2 -2 3270 3137 486 284 65 5 chr5 174716834 174717022 -28368510 + MIR SINE MIR 16 217 -45 249 325 158 53 chr5 174717218 174717630 -28367902 - L2 LINE L2 -6 3266 2812 198 0 0 0 chr5 174717845 174717867 -28367665 + (CA)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr5 174719803 174719825 -28365707 + AT_rich Low_complexity Low_complexity 1 22 0 259 306 102 19 chr5 174719881 174719989 -28365543 - L2 LINE L2 0 3272 3156 316 324 137 0 chr5 174720946 174721048 -28364484 - L2 LINE L2 0 3272 3157 423 315 22 28 chr5 174721311 174721489 -28364043 - MIR3 SINE MIR -14 194 18 511 320 20 65 chr5 174721616 174721957 -28363575 + MLT1K LTR MaLR 97 422 -166 472 239 254 33 chr5 174722278 174722491 -28363041 + MIR SINE MIR 3 262 0 1552 199 103 3 chr5 174722541 174722872 -28362660 - MLT1A1 LTR MaLR 0 365 2 1794 182 83 0 chr5 174722884 174723269 -28362263 - MLT1A1-int LTR MaLR -5 1730 1314 3029 227 39 70 chr5 174723402 174724349 -28361183 - MLT1A1-int LTR MaLR -725 1010 93 1011 166 0 5 chr5 174724349 174724542 -28360990 + L1MA4 LINE L1 6087 6278 -22 240 83 62 21 chr5 174724599 174724647 -28360885 + MLT1J1 LTR MaLR 386 435 -11 1769 151 15 87 chr5 174724664 174725055 -28360477 - MLT1A1 LTR MaLR -2 363 1 7717 22 1 0 chr5 174725177 174726075 -28359457 + L1PA3 LINE L1 5254 6152 -3 256 321 50 21 chr5 174726327 174726467 -28359065 - MIR3 SINE MIR -16 192 49 394 158 40 50 chr5 174727764 174727865 -28357667 - MIR3 SINE MIR -8 200 101 569 215 186 41 chr5 174727938 174728110 -28357422 + MIR SINE MIR 53 249 -13 637 286 11 22 chr5 174728248 174728433 -28357099 + MIR3 SINE MIR 25 207 -1 2505 178 2 9 chr5 174728749 174729176 -28356356 - MSTB LTR MaLR -2 424 1 404 281 8 33 chr5 174729399 174729520 -28356012 - MIR SINE MIR -31 231 114 2168 175 113 29 chr5 174730035 174730076 -28355456 - MLT2B1 LTR ERVL 0 520 484 276 100 0 0 chr5 174730076 174730116 -28355416 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 2168 175 113 29 chr5 174730116 174730494 -28355038 - MLT2B1 LTR ERVL -36 484 54 2297 126 36 14 chr5 174730494 174730850 -28354682 - THE1B LTR MaLR 0 364 1 2168 175 113 29 chr5 174730850 174730909 -28354623 - MLT2B1 LTR ERVL -466 54 1 6332 148 10 2 chr5 174731876 174733010 -28352522 + L1MC1 LINE L1 5186 6328 -5 314 335 29 0 chr5 174733180 174733353 -28352179 + L1MC/D LINE L1 5613 5790 -2018 1025 200 25 0 chr5 174734731 174734931 -28350601 + MER20 DNA MER1_type 4 208 -11 610 323 178 30 chr5 174734965 174735335 -28350197 + L2 LINE L2 1749 2063 -1251 1872 205 52 46 chr5 174735335 174735837 -28349695 - MLT1D LTR MaLR 0 505 1 610 323 178 30 chr5 174735837 174736122 -28349410 + L2 LINE L2 2063 2501 -813 628 323 76 58 chr5 174736126 174736706 -28348826 + L2 LINE L2 2670 3272 0 589 282 83 24 chr5 174738556 174738893 -28346639 + L1ME LINE L1 5273 5629 -541 745 194 56 28 chr5 174738960 174739140 -28346392 + MER20 DNA MER1_type 32 216 -3 929 226 148 64 chr5 174739155 174739607 -28345925 + MLT1D LTR MaLR 16 505 0 1146 236 163 62 chr5 174739760 174740357 -28345175 + L1MA9 LINE L1 5618 6274 -38 1508 126 51 27 chr5 174740400 174740694 -28344838 + L1MA9 LINE L1 6002 6302 -10 241 276 78 9 chr5 174740810 174740926 -28344606 + L1ME LINE L1 5766 5889 -281 30 59 0 0 chr5 174740946 174740997 -28344535 + AT_rich Low_complexity Low_complexity 1 51 0 222 105 0 0 chr5 174742547 174742585 -28342947 + (TA)n Simple_repeat Simple_repeat 1 38 0 328 227 18 73 chr5 174742653 174742733 -28342799 + L2 LINE L2 3166 3240 -32 1498 184 34 87 chr5 174742733 174743145 -28342387 + MLT1B LTR MaLR 1 390 0 328 227 18 73 chr5 174743145 174743174 -28342358 + L2 LINE L2 3240 3269 -3 21 0 0 0 chr5 174743321 174743342 -28342190 + AT_rich Low_complexity Low_complexity 1 21 0 477 0 0 0 chr5 174743633 174743686 -28341846 + (TG)n Simple_repeat Simple_repeat 2 54 0 489 287 16 37 chr5 174743755 174743943 -28341589 + L2 LINE L2 3128 3311 -2 353 315 30 25 chr5 174745244 174745545 -28339987 + MLT1K LTR MaLR 175 510 -78 370 291 205 8 chr5 174745686 174745813 -28339719 - MIR SINE MIR -98 164 13 251 125 0 36 chr5 174745862 174745918 -28339614 - MLT2D LTR ERVL -12 508 455 219 250 0 0 chr5 174745920 174745980 -28339552 + GA-rich Low_complexity Low_complexity 2 61 0 1680 197 25 27 chr5 174745980 174746346 -28339186 - MLT2D LTR ERVL -48 366 2 393 260 174 9 chr5 174748680 174748899 -28336633 + MLT1L LTR MaLR 22 276 -339 450 239 78 72 chr5 174748902 174749069 -28336463 + MLT1L LTR MaLR 440 607 -8 269 50 0 25 chr5 174750559 174750599 -28334933 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1952 109 80 0 chr5 174750990 174751264 -28334268 + AluSx SINE Alu 1 296 -16 289 284 86 9 chr5 174751308 174751424 -28334108 + MIR3 SINE MIR 60 184 -24 311 333 75 55 chr5 174751840 174752041 -28333491 - MIR SINE MIR -56 206 2 403 285 75 55 chr5 174752119 174752372 -28333160 + MIR SINE MIR 4 261 -1 522 123 0 75 chr5 174752890 174752996 -28332536 - MER5C DNA MER1_type 0 324 227 264 156 313 21 chr5 174753007 174753103 -28332429 - MER5C DNA MER1_type -200 124 1 789 185 123 18 chr5 174753222 174753449 -28332083 - MER33 DNA MER1_type -72 252 2 1033 72 7 0 chr5 174753463 174753602 -28331930 - L1PB1 LINE L1 0 6151 6012 11391 150 51 4 chr5 174753602 174758157 -28327375 - L1PBa LINE L1 -1315 5547 636 1238 121 5 0 chr5 174758159 174758358 -28327174 - L1PBa LINE L1 -6663 200 1 290 244 213 31 chr5 174758868 174758995 -28326537 - L2 LINE L2 0 3313 3164 828 176 0 13 chr5 174759071 174759224 -28326308 - AluJb SINE Alu -1 311 161 1792 102 109 0 chr5 174759263 174759537 -28325995 + AluY SINE Alu 1 304 -7 2031 118 0 24 chr5 174759708 174760039 -28325493 - AluSx SINE Alu 0 324 1 727 170 121 0 chr5 174760041 174760182 -28325350 - AluJb SINE Alu -13 299 142 324 0 0 0 chr5 174760186 174760222 -28325310 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2015 129 0 0 chr5 174760225 174760505 -28325027 - AluSx SINE Alu -32 280 1 455 318 178 33 chr5 174760537 174761027 -28324505 - L2 LINE L2 -339 2975 2415 2222 97 3 16 chr5 174761611 174761921 -28323611 - AluSx SINE Alu -1 311 6 431 190 0 0 chr5 174762153 174762232 -28323300 + FRAM/FAM SINE Alu 1 78 -98 2218 145 74 20 chr5 174763287 174763693 -28321839 + MSTA LTR MaLR 1 428 0 278 77 0 0 chr5 174764085 174764124 -28321408 + Alu SINE Alu 254 292 -10 422 284 86 53 chr5 174764176 174764479 -28321053 - L1ME4a LINE L1 -118 6003 5691 201 287 248 0 chr5 174764904 174765033 -28320499 + L2 LINE L2 3112 3272 0 560 329 63 25 chr5 174765164 174765401 -28320131 - MIR SINE MIR -4 258 13 1711 197 17 11 chr5 174765405 174765755 -28319777 - MLT1A1 LTR MaLR -4 361 10 270 330 82 26 chr5 174765783 174765977 -28319555 - L3 LINE CR1 -192 1385 1181 514 264 9 0 chr5 174766171 174766277 -28319255 + MIR SINE MIR 6 112 -150 709 254 105 9 chr5 174766398 174766626 -28318906 - MIR SINE MIR -11 251 2 267 385 0 0 chr5 174767349 174767471 -28318061 + MIR SINE MIR 30 151 -57 274 302 9 38 chr5 174767842 174767948 -28317584 + CT-rich Low_complexity Low_complexity 2 104 0 231 231 51 0 chr5 174768063 174768141 -28317391 - L1MC4 LINE L1 -1346 6696 6615 405 102 0 0 chr5 174768172 174768231 -28317301 + (TG)n Simple_repeat Simple_repeat 2 60 0 516 291 23 17 chr5 174768402 174768577 -28316955 - MIR3 SINE MIR -18 190 15 722 271 81 30 chr5 174768838 174769074 -28316458 - MIR SINE MIR -13 249 2 180 279 0 0 chr5 174769074 174769111 -28316421 + L2 LINE L2 3267 3303 -10 362 339 43 27 chr5 174769227 174769413 -28316119 - MER5A DNA MER1_type 0 189 1 319 274 75 0 chr5 174770105 174770211 -28315321 - L2 LINE L2 -15 3257 3144 244 195 0 46 chr5 174770360 174770447 -28315085 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 249 191 21 0 chr5 174770503 174770550 -28314982 - L2 LINE L2 -10 3303 3256 273 333 11 0 chr5 174771932 174772022 -28313510 - MIR3 SINE MIR -9 199 109 237 252 28 93 chr5 174772356 174772463 -28313069 - L3 LINE CR1 -2 1575 1476 1460 247 42 8 chr5 174772958 174773335 -28312197 + LTR16A LTR ERVL 61 450 0 480 240 0 0 chr5 174773392 174773488 -28312044 + MER58A DNA MER1_type 32 127 0 232 250 0 17 chr5 174773503 174773563 -28311969 + MER58A DNA MER1_type 162 220 -4 247 286 42 0 chr5 174773889 174773964 -28311568 - MIR SINE MIR -53 155 79 194 286 0 18 chr5 174774152 174774208 -28311324 - MER5B DNA MER1_type -117 61 7 504 65 39 0 chr5 174774246 174774323 -28311209 - MADE1 DNA Mariner 0 80 1 609 376 54 22 chr5 174774406 174774929 -28310603 - L2 LINE L2 -2 3270 2737 2457 225 47 8 chr5 174775863 174776670 -28308862 - L1MDa LINE L1 -3280 3260 2430 649 172 0 0 chr5 174776665 174776781 -28308751 + L1MD2 LINE L1 4109 4224 -1922 * 334 174 14 14 chr5 174776786 174776855 -28308677 + L1MD2 LINE L1 5494 5562 -680 * 914 241 67 19 chr5 174776854 174777124 -28308408 + L1MD2 LINE L1 6068 6350 -9 332 284 187 13 chr5 174777414 174777569 -28307963 - MER5A DNA MER1_type -3 186 5 383 220 132 0 chr5 174777581 174777672 -28307860 + MIR SINE MIR 49 151 -111 305 160 10 130 chr5 174778717 174778817 -28306715 + L2 LINE L2 3226 3313 0 193 225 0 25 chr5 174778822 174778862 -28306670 - MIR SINE MIR -219 43 5 * 351 338 31 48 chr5 174778838 174779066 -28306466 - MIR SINE MIR -32 230 7 182 320 117 8 chr5 174780745 174780873 -28304659 + L2 LINE L2 2942 3083 -189 2283 104 3 0 chr5 174781327 174781624 -28303908 + AluSp SINE Alu 1 298 -15 181 150 25 25 chr5 174781966 174782006 -28303526 - L2 LINE L2 -590 2724 2685 408 229 49 137 chr5 174782723 174782906 -28302626 + MIR3 SINE MIR 36 202 -6 404 149 0 0 chr5 174783164 174783238 -28302294 + L1PA10 LINE L1 5098 5171 -975 16438 32 1 3 chr5 174783238 174786010 -28299522 + L1PA4 LINE L1 3399 6171 0 6338 79 27 2 chr5 174786010 174786989 -28298543 + L1PA10 LINE L1 5159 6159 -9 388 306 83 54 chr5 174787059 174787431 -28298101 + L1ME4a LINE L1 4182 4564 -1582 2278 109 3 0 chr5 174787451 174787755 -28297777 - AluSq SINE Alu -8 305 1 21 57 0 0 chr5 174787755 174787790 -28297742 + AT_rich Low_complexity Low_complexity 1 35 0 2710 287 65 13 chr5 174787931 174789005 -28296527 + L1MEc LINE L1 35 1164 -5232 508 238 27 0 chr5 174789014 174789161 -28296371 + L1MEc LINE L1 1565 1715 -4681 3321 221 80 21 chr5 174789309 174790400 -28295132 - L1MEc LINE L1 -2933 3282 2171 517 188 74 60 chr5 174790396 174790545 -28294987 - L1MEc LINE L1 -6210 186 36 * 1779 220 28 17 chr5 174790549 174791009 -28294523 + L1ME1 LINE L1 5697 6161 -5 390 261 223 24 chr5 174791194 174791531 -28294001 + L1ME4a LINE L1 5477 5880 -241 279 79 0 0 chr5 174791578 174791616 -28293916 + (TG)n Simple_repeat Simple_repeat 2 39 0 314 237 43 0 chr5 174791624 174791717 -28293815 + L1ME4a LINE L1 5974 6070 -51 623 332 142 18 chr5 174792150 174792602 -28292930 - L2 LINE L2 -2 3311 2804 195 227 185 34 chr5 174792748 174792867 -28292665 + MIR SINE MIR 80 216 -46 317 270 155 7 chr5 174793794 174793942 -28291590 - MIR SINE MIR 0 262 93 1445 204 29 19 chr5 174794190 174794499 -28291033 + MER58B DNA MER1_type 30 341 0 408 227 101 17 chr5 174796139 174796258 -28289274 - MER103 DNA DNA -16 150 22 649 226 138 6 chr5 174796446 174796605 -28288927 - MER5A DNA MER1_type 0 189 10 7786 114 19 6 chr5 174798658 174799795 -28285737 + Tigger1 DNA MER2_type 24 1175 -1243 980 123 7 0 chr5 174799798 174799936 -28285596 + FRAM SINE Alu 22 160 -16 6455 113 10 6 chr5 174799942 174800901 -28284631 + Tigger1 DNA MER2_type 1201 2163 -255 2443 158 15 0 chr5 174800901 174801306 -28284226 - L1MC1 LINE L1 -490 6123 5713 8541 206 12 2 chr5 174801307 174801871 -28283661 - L1PA15 LINE L1 0 6816 6259 2184 120 7 3 chr5 174801871 174802180 -28283352 - AluSx SINE Alu -2 310 1 8541 206 12 2 chr5 174802180 174804205 -28281327 - L1PA15 LINE L1 -557 6259 4217 1383 163 37 0 chr5 174804205 174804448 -28281084 - L1PA13 LINE L1 -1 6162 5909 6926 243 29 48 chr5 174804451 174804726 -28280806 - L1PA15 LINE L1 -2570 4227 3948 1675 57 0 0 chr5 174804726 174804938 -28280594 - L1PA4 LINE L1 0 6155 5944 6926 243 29 48 chr5 174804938 174806745 -28278787 - L1PA15 LINE L1 -2849 3948 2109 2107 125 0 0 chr5 174806745 174807045 -28278487 - AluSc SINE Alu 0 300 1 6926 243 29 48 chr5 174807045 174807191 -28278341 - L1PA15 LINE L1 -4688 2109 1962 2293 82 7 0 chr5 174807191 174807484 -28278048 + AluY SINE Alu 1 295 -16 6926 243 29 48 chr5 174807484 174809092 -28276440 - L1PA15 LINE L1 -4835 1962 1 495 205 41 0 chr5 174809105 174809227 -28276305 - L1MC1 LINE L1 -892 5721 5595 243 136 0 0 chr5 174809260 174809304 -28276228 + L1M LINE L1 5334 5377 -956 7213 225 33 24 chr5 174809314 174809889 -28275643 - L1MC1 LINE L1 -837 5589 5021 2335 88 0 7 chr5 174809889 174810195 -28275337 + AluY SINE Alu 1 304 -7 7213 225 33 24 chr5 174810195 174811570 -28273962 - L1MC1 LINE L1 -1405 5021 3620 3106 172 53 72 chr5 174811566 174812270 -28273262 - L1MC1 LINE L1 -5718 708 19 * 883 203 117 17 chr5 174812272 174812572 -28272960 - L1ME LINE L1 -553 5592 5263 413 305 139 35 chr5 174812666 174813012 -28272520 - L1ME LINE L1 -938 5191 4768 4880 42 3 3 chr5 174813012 174813603 -28271929 - LTR10C LTR ERV1 0 591 1 413 305 139 35 chr5 174813603 174813797 -28271735 - L1ME LINE L1 -1361 4768 4595 1771 257 50 35 chr5 174814079 174814596 -28270936 + L1MC4a LINE L1 6444 6968 -840 2362 221 79 8 chr5 174814598 174815209 -28270323 + L1MC4 LINE L1 7259 7912 -130 1082 288 108 9 chr5 174815292 174815937 -28269595 - L1ME LINE L1 -1530 4599 3891 1233 298 72 80 chr5 174815955 174816792 -28268740 - L1ME LINE L1 -5288 831 2 194 152 43 43 chr5 174816796 174816842 -28268690 + MIR SINE MIR 107 152 -110 639 298 21 28 chr5 174816945 174817230 -28268302 - L1ME LINE L1 -383 5738 5456 588 256 52 12 chr5 174817476 174817648 -28267884 - MER117 DNA MER1_type -4 193 15 288 0 0 0 chr5 174818908 174818940 -28266592 + (CA)n Simple_repeat Simple_repeat 2 33 0 960 209 0 0 chr5 174819121 174819293 -28266239 + FAM SINE Alu 2 173 -2 240 308 97 88 chr5 174819496 174819827 -28265705 + L2 LINE L2 2939 3272 0 340 291 93 46 chr5 174819862 174820013 -28265519 - MIR3 SINE MIR -9 199 42 231 302 123 0 chr5 174820057 174820163 -28265369 - L2 LINE L2 -12 3260 3142 788 152 18 23 chr5 174820257 174820428 -28265104 - MER96B DNA MER1_type? -239 178 9 217 326 95 11 chr5 174821182 174821277 -28264255 + MIR SINE MIR 23 125 -83 464 272 99 16 chr5 174821641 174821832 -28263700 + MIR SINE MIR 44 250 -12 268 229 72 36 chr5 174821870 174821953 -28263579 + L2 LINE L2 3185 3270 -2 218 217 0 50 chr5 174821980 174822040 -28263492 + GA-rich Low_complexity Low_complexity 4 60 0 835 309 80 31 chr5 174822047 174822559 -28262973 - HERV16 LTR ERVL -1844 3920 3384 * 4394 300 37 26 chr5 174822557 174824280 -28261252 - HERV16 LTR ERVL -1900 3096 1590 262 341 8 0 chr5 174824348 174824474 -28261058 - HERV16 LTR ERVL -3569 1427 1301 1171 278 65 35 chr5 174825148 174825669 -28259863 - MER34 LTR ERV1 -5 537 1 214 136 0 45 chr5 174825968 174826012 -28259520 + (CAGAGA)n Simple_repeat Simple_repeat 5 46 0 1733 152 76 0 chr5 174826746 174827036 -28258496 - AluJo SINE Alu 0 312 1 300 258 0 0 chr5 174827128 174827190 -28258342 + L2 LINE L2 3249 3310 -3 209 173 19 19 chr5 174827417 174827469 -28258063 + (TA)n Simple_repeat Simple_repeat 1 52 0 391 251 80 50 chr5 174827634 174827833 -28257699 - LTR16A1 LTR ERVL -1 456 252 520 241 23 23 chr5 174828508 174828641 -28256891 - MIR SINE MIR -4 258 126 2349 83 0 0 chr5 174828661 174828950 -28256582 + AluSc SINE Alu 1 289 -20 244 246 0 0 chr5 174828950 174829007 -28256525 + L1ME LINE L1 5607 5663 -458 2719 105 22 70 chr5 174829025 174829471 -28256061 + LTR8 LTR ERV1 1 425 -266 2118 92 11 7 chr5 174829472 174829782 -28255750 + AluSx SINE Alu 1 311 0 1108 157 0 0 chr5 174829816 174829975 -28255557 + AluSg/x SINE Alu 138 296 -16 225 133 0 0 chr5 174829976 174830006 -28255526 + LTR8 LTR ERV1 528 557 -134 631 110 12 0 chr5 174830006 174830088 -28255444 - AluSg/x SINE Alu -59 253 171 277 156 156 26 chr5 174830093 174830170 -28255362 - L1MC4 LINE L1 -1026 7016 6930 1254 125 45 0 chr5 174832140 174832340 -28253192 + Tigger7 DNA MER2_type 2279 2487 0 309 109 0 0 chr5 174832448 174832494 -28253038 + (T)n Simple_repeat Simple_repeat 1 46 0 192 288 288 22 chr5 174832533 174832672 -28252860 - MIR3 SINE MIR -21 187 12 1819 165 3 7 chr5 174832820 174833117 -28252415 + AluSx SINE Alu 1 296 -16 232 302 24 103 chr5 174833513 174833639 -28251893 + MIR3 SINE MIR 88 203 -5 5965 101 15 9 chr5 174834234 174834885 -28250647 - L1PA10 LINE L1 -1 6167 5508 2416 77 3 0 chr5 174834885 174835183 -28250349 + AluSg SINE Alu 5 303 -7 5965 101 15 9 chr5 174835183 174835390 -28250142 - L1PA10 LINE L1 -660 5508 5304 1364 149 21 0 chr5 174835390 174835625 -28249907 + L1PA10 LINE L1 5061 5300 -846 299 211 0 0 chr5 174835625 174835682 -28249850 + MIR SINE MIR 101 157 -105 1018 200 0 35 chr5 174835718 174835973 -28249559 + SVA Other Other 433 678 -708 22 0 0 0 chr5 174836087 174836109 -28249423 + AT_rich Low_complexity Low_complexity 1 22 0 197 229 33 33 chr5 174836111 174836172 -28249360 + MIR SINE MIR 191 251 -11 388 290 19 9 chr5 174836803 174836910 -28248622 - MIR SINE MIR -90 172 65 201 280 80 80 chr5 174836902 174836952 -28248580 + L2 LINE L2 3212 3261 -52 * 2049 179 5 42 chr5 174836952 174837331 -28248201 - MLT1A1 LTR MaLR 0 365 1 201 280 80 80 chr5 174837331 174837380 -28248152 + L2 LINE L2 3260 3311 -2 639 241 176 14 chr5 174837555 174837771 -28247761 - MIR SINE MIR 0 262 12 359 313 62 14 chr5 174838875 174839019 -28246513 - MIR SINE MIR -94 168 18 187 287 131 57 chr5 174839061 174839183 -28246349 + L2 LINE L2 3140 3270 -2 220 264 16 36 chr5 174839183 174839266 -28246266 + GA-rich Low_complexity Low_complexity 1 81 0 335 313 106 23 chr5 174839812 174840029 -28245503 - L1ME4a LINE L1 -177 5944 5710 1887 157 3 3 chr5 174840033 174840332 -28245200 + AluJb SINE Alu 1 299 -13 314 274 71 16 chr5 174840473 174840620 -28244912 - L1ME4a LINE L1 -463 5658 5536 1589 270 38 32 chr5 174842118 174842934 -28242598 + L1ME3A LINE L1 5135 5951 -219 370 336 110 0 chr5 174843485 174843631 -28241901 - MIR SINE MIR -72 190 29 499 157 0 0 chr5 174843942 174844025 -28241507 - L1MB1 LINE L1 -55 6134 6052 1128 146 4 67 chr5 174844027 174844266 -28241266 + L1MA10 LINE L1 6109 6332 -2 660 259 0 14 chr5 174844896 174845043 -28240489 + MIR SINE MIR 18 162 -100 243 344 10 31 chr5 174845156 174845252 -28240280 - MIR SINE MIR -65 143 50 202 366 0 14 chr5 174846240 174846311 -28239221 + L2 LINE L2 2994 3063 -209 793 201 45 0 chr5 174846920 174847074 -28238458 + LTR8 LTR ERV1 1 161 -530 900 203 6 0 chr5 174847077 174847235 -28238297 - MER72 LTR ERV1 -199 523 365 937 204 129 31 chr5 174847354 174847609 -28237923 + LTR8A LTR ERV1 319 598 -129 534 266 122 63 chr5 174847604 174847875 -28237657 + MLT1K LTR MaLR 302 588 0 * 220 288 51 0 chr5 174847898 174847957 -28237575 + L2 LINE L2 3193 3254 -59 5015 139 6 8 chr5 174847957 174848681 -28236851 + MER72 LTR ERV1 1 722 0 249 337 64 35 chr5 174849924 174850126 -28235406 + L2 LINE L2 2686 2893 -421 457 282 34 126 chr5 174850171 174850497 -28235035 + L2 LINE L2 2977 3272 0 219 36 0 0 chr5 174850580 174850608 -28234924 + (GA)n Simple_repeat Simple_repeat 2 29 0 1236 257 79 45 chr5 174850686 174851129 -28234403 - L3 LINE CR1 -1 1576 1119 568 344 5 11 chr5 174851186 174851372 -28234160 - MER5A DNA MER1_type -3 186 2 1597 159 0 71 chr5 174851898 174852207 -28233325 + AluJo SINE Alu 11 297 -15 550 314 61 15 chr5 174852274 174852465 -28233067 + MIR SINE MIR 3 191 -63 192 184 0 0 chr5 174852509 174852558 -28232974 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 183 259 74 0 chr5 174852602 174852656 -28232876 - MIR SINE MIR -106 156 99 206 223 202 75 chr5 174852864 174852958 -28232574 - L2 LINE L2 -1 3271 3166 * 770 247 123 23 chr5 174852937 174853245 -28232287 + L2 LINE L2 2975 3313 0 371 304 52 0 chr5 174854746 174854881 -28230651 + MIR SINE MIR 108 249 -13 2549 52 0 0 chr5 174855001 174855292 -28230240 - AluY SINE Alu -20 291 1 599 278 139 0 chr5 174855867 174856054 -28229478 - MIR SINE MIR 0 262 50 723 267 38 14 chr5 174856066 174856276 -28229256 - MIR SINE MIR 0 262 48 909 240 0 6 chr5 174856584 174856759 -28228773 - MER5A DNA MER1_type -10 179 6 235 266 104 104 chr5 174856985 174857099 -28228433 + L2 LINE L2 3036 3152 -120 2264 188 150 2 chr5 174857099 174857551 -28227981 + LTR53 LTR ERVL 1 519 0 235 266 104 104 chr5 174857551 174857628 -28227904 + L2 LINE L2 3151 3227 -45 1922 137 30 13 chr5 174858296 174858475 -28227057 - AluJo SINE Alu -7 305 118 242 0 61 0 chr5 174858475 174858508 -28227024 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1922 137 30 13 chr5 174858508 174858628 -28226904 - AluJo SINE Alu -194 118 1 336 286 41 58 chr5 174858630 174858801 -28226731 - MIR SINE MIR -72 190 23 469 241 48 28 chr5 174859177 174859322 -28226210 - MIR SINE MIR -12 250 103 462 195 88 146 chr5 174859329 174859590 -28225942 - MER112 DNA MER1_type -13 247 2 340 294 24 0 chr5 174859590 174859675 -28225857 - MIR SINE MIR -164 98 12 944 157 32 149 chr5 174859678 174859785 -28225747 - MER33 DNA MER1_type -2261 324 206 2112 120 3 0 chr5 174859785 174860077 -28225455 + AluSc SINE Alu 1 293 -16 944 157 32 149 chr5 174860077 174860100 -28225432 - MER33 DNA MER1_type -2379 206 182 1748 84 22 0 chr5 174860100 174860326 -28225206 + L1PA12 LINE L1 5937 6167 -1 944 157 32 149 chr5 174860326 174860569 -28224963 - MER33 DNA MER1_type -2403 182 1 336 48 0 0 chr5 174860643 174860685 -28224847 + (TA)n Simple_repeat Simple_repeat 2 43 0 2454 91 0 3 chr5 174860685 174860993 -28224539 - AluSq SINE Alu -6 307 1 2226 164 3 3 chr5 174862707 174863074 -28222458 + L1MB5 LINE L1 5710 6076 -98 230 245 113 139 chr5 174864088 174864124 -28221408 - MIR SINE MIR -111 151 116 2912 19 0 0 chr5 174864124 174864442 -28221090 + AluYb8 SINE Alu 1 318 0 230 245 113 139 chr5 174864442 174864556 -28220976 - MIR SINE MIR -146 116 5 387 325 14 48 chr5 174865094 174865303 -28220229 + MLT1K LTR MaLR 43 244 -344 381 281 118 13 chr5 174865358 174865511 -28220021 + MLT1K LTR MaLR 420 588 0 587 177 111 111 chr5 174865511 174865709 -28219823 - MIR SINE MIR -51 211 14 235 149 164 15 chr5 174866499 174866566 -28218966 + MIR SINE MIR 20 96 -112 562 323 36 9 chr5 174866633 174866853 -28218679 + MIR SINE MIR 5 230 -32 2212 79 7 0 chr5 174867520 174867824 -28217708 + AluY SINE Alu 1 306 0 444 347 74 12 chr5 174868283 174868525 -28217007 + LTR16B LTR ERVL 134 390 -74 1254 125 45 0 chr5 174869787 174869987 -28215545 + Tigger7 DNA MER2_type 2279 2487 0 336 102 0 0 chr5 174870094 174870143 -28215389 + (T)n Simple_repeat Simple_repeat 1 49 0 1652 186 3 7 chr5 174870470 174870766 -28214766 + AluSx SINE Alu 1 295 -17 488 287 25 13 chr5 174871025 174871233 -28214299 - MIR SINE MIR -14 248 42 224 344 42 0 chr5 174871247 174871343 -28214189 + L2 LINE L2 3158 3257 -15 2260 107 3 0 chr5 174872153 174872451 -28213081 + AluSp SINE Alu 1 299 -14 222 304 122 51 chr5 174872648 174872862 -28212670 + MIR SINE MIR 20 248 -14 524 282 100 9 chr5 174872996 174873216 -28212316 + MIR SINE MIR 11 250 -12 257 328 116 19 chr5 174874947 174875148 -28210384 - MIR3 SINE MIR -40 222 4 655 279 153 3 chr5 174875160 174875588 -28209944 + LTR33 LTR ERVL 3 513 -8 274 237 66 26 chr5 174876371 174876447 -28209085 + L2 LINE L2 3194 3272 0 485 292 129 19 chr5 174877621 174877830 -28207702 + MIR SINE MIR 10 241 -21 901 219 153 62 chr5 174877905 174878356 -28207176 - MER34C LTR ERV1 -81 504 13 761 246 18 40 chr5 174878695 174878923 -28206609 - MLT1K LTR MaLR -2 586 364 1704 200 3 13 chr5 174881499 174881804 -28203728 + AluJb SINE Alu 1 302 -10 186 328 104 30 chr5 174882347 174882481 -28203051 + L2 LINE L2 2895 3038 -275 252 235 0 0 chr5 174883052 174883120 -28202412 + (CA)n Simple_repeat Simple_repeat 1 68 0 482 309 24 6 chr5 174883288 174883456 -28202076 + MIR SINE MIR 20 190 -72 338 235 0 0 chr5 174884256 174884324 -28201208 - L2 LINE L2 0 3313 3246 222 156 0 0 chr5 174884391 174884436 -28201096 + (TG)n Simple_repeat Simple_repeat 2 46 0 2329 96 0 0 chr5 174884547 174884839 -28200693 + AluSq SINE Alu 1 292 -21 223 368 111 0 chr5 174884868 174884985 -28200547 - L2 LINE L2 -217 3096 2967 288 259 25 25 chr5 174885287 174885368 -28200164 + (CATA)n Simple_repeat Simple_repeat 2 82 0 369 62 0 0 chr5 174886831 174886879 -28198653 + (TC)n Simple_repeat Simple_repeat 1 48 0 264 281 58 16 chr5 174886898 174887019 -28198513 + MIR SINE MIR 127 252 -10 623 294 28 32 chr5 174887509 174887757 -28197775 + MIR SINE MIR 3 249 -13 272 263 105 15 chr5 174888826 174888959 -28196573 - MIR SINE MIR -52 210 66 2498 96 0 0 chr5 174889158 174889470 -28196062 - AluSx SINE Alu 0 312 1 2465 77 3 0 chr5 174889497 174889794 -28195738 - AluSp SINE Alu -15 298 1 399 350 20 29 chr5 174889794 174889843 -28195689 - MIR SINE MIR 0 262 214 2247 118 32 97 chr5 174889843 174890274 -28195258 + MER57A LTR ERV1 1 403 0 399 350 20 29 chr5 174890274 174890470 -28195062 - MIR SINE MIR -48 214 19 744 251 72 13 chr5 174892327 174892562 -28192970 - MIR SINE MIR -3 259 11 414 170 28 142 chr5 174892685 174892826 -28192706 - L2 LINE L2 -4 3268 3144 184 256 49 24 chr5 174892930 174893012 -28192520 + MIR SINE MIR 17 100 -108 770 286 0 16 chr5 174893243 174893431 -28192101 - MER82 DNA MER2_type 0 653 469 502 148 244 0 chr5 174893431 174893546 -28191986 + MER39 LTR ERV1 3 145 -562 250 297 77 0 chr5 174893550 174893641 -28191891 + MIR SINE MIR 95 192 -70 1213 221 82 75 chr5 174893643 174893709 -28191823 - LTR16B LTR ERVL 0 464 400 862 186 12 0 chr5 174893709 174893881 -28191651 + L1MB4 LINE L1 6001 6174 -6 1213 221 82 75 chr5 174893881 174894267 -28191265 - LTR16B LTR ERVL -64 400 9 2767 66 33 3 chr5 174894803 174895167 -28190365 - L1PA13 LINE L1 -365 5803 5429 2227 105 0 18 chr5 174895167 174895496 -28190036 + L1PA13 LINE L1 5836 6161 -2 2869 0 0 3 chr5 174895503 174895807 -28189725 + AluYa5 SINE Alu 1 303 -8 246 146 36 55 chr5 174895807 174895862 -28189670 - L1MC/D LINE L1 -2246 5749 5696 667 307 147 44 chr5 174899027 174900112 -28185420 - L2 LINE L2 -201 3071 1862 181 275 0 0 chr5 174900723 174900763 -28184769 - MIR SINE MIR -3 259 220 526 175 87 32 chr5 174900944 174901070 -28184462 + FLAM_C SINE Alu 1 133 0 351 0 0 0 chr5 174901179 174901218 -28184314 + (TG)n Simple_repeat Simple_repeat 2 40 0 2146 240 70 61 chr5 174901515 174902272 -28183260 + LTR41 LTR ERVL 3 766 -7 198 71 0 0 chr5 174902298 174902326 -28183206 + (CA)n Simple_repeat Simple_repeat 1 28 0 395 278 26 0 chr5 174902416 174902531 -28183001 - MIR SINE MIR -61 201 84 868 192 0 6 chr5 174902573 174902729 -28182803 - LTR32 LTR ERVL 0 471 317 2006 158 25 6 chr5 174902825 174903147 -28182385 - LTR32 LTR ERVL -122 349 22 2132 95 0 30 chr5 174903229 174903534 -28181998 - AluSq SINE Alu 0 313 18 180 344 66 0 chr5 174903550 174903611 -28181921 - MIR SINE MIR -194 68 4 233 229 219 10 chr5 174905355 174905451 -28180081 - MIR SINE MIR -108 154 39 2058 139 7 0 chr5 174906071 174906366 -28179166 - AluSg SINE Alu -13 297 1 1805 202 83 9 chr5 174906462 174906897 -28178635 + MLT1C LTR MaLR 1 467 0 923 178 86 0 chr5 174906921 174907095 -28178437 - MER5A DNA MER1_type 0 189 1 298 270 66 15 chr5 174907339 174907476 -28178056 + MIR SINE MIR 119 262 0 294 330 9 9 chr5 174907992 174908098 -28177434 - L2 LINE L2 -9 3304 3199 1221 129 0 0 chr5 174908472 174908642 -28176890 + AluSg/x SINE Alu 140 309 -3 192 303 118 34 chr5 174909504 174909682 -28175850 - L2 LINE L2 -25 3288 3096 538 314 68 5 chr5 174911128 174911335 -28174197 + MIR SINE MIR 19 238 -24 2098 49 0 8 chr5 174912498 174912743 -28172789 + AluY SINE Alu 54 296 -15 353 263 0 0 chr5 174912862 174912942 -28172590 - MER5A DNA MER1_type -84 105 26 191 290 82 58 chr5 174913275 174913482 -28172050 + L2 LINE L2 2501 2712 -602 1535 247 48 16 chr5 174913489 174913930 -28171602 + L1MEc LINE L1 41 495 -5901 566 183 26 17 chr5 174913960 174914075 -28171457 + MER5A DNA MER1_type 74 189 0 2513 24 7 0 chr5 174914223 174914510 -28171022 - AluYb8 SINE Alu 0 318 30 346 216 0 14 chr5 174914510 174914584 -28170948 - MER5A DNA MER1_type -113 76 4 234 388 37 8 chr5 174914706 174914840 -28170692 - L3 LINE CR1 -117 1460 1323 1686 145 35 19 chr5 174915067 174915377 -28170155 + L1PB2 LINE L1 1 315 -6548 2352 231 79 25 chr5 174915378 174916062 -28169470 - MER50 LTR ERV1 0 734 14 731 218 0 0 chr5 174916068 174916210 -28169322 + L1PB2 LINE L1 313 454 -6409 14801 191 16 8 chr5 174916225 174918315 -28167217 + L1PB2 LINE L1 2423 4497 -2370 2637 98 8 16 chr5 174918315 174918693 -28166839 + THE1C LTR MaLR 1 375 0 14801 191 16 8 chr5 174918693 174921018 -28164514 + L1PB2 LINE L1 4497 6867 0 374 192 13 26 chr5 174921053 174921131 -28164401 - MER5A DNA MER1_type -50 139 63 288 348 154 14 chr5 174921562 174921783 -28163749 - MIR SINE MIR -3 259 8 242 317 0 37 chr5 174922334 174922495 -28163037 + GA-rich Low_complexity Low_complexity 3 157 0 266 256 70 31 chr5 174922573 174922702 -28162830 - MIR3 SINE MIR -47 161 28 281 328 91 44 chr5 174925541 174925820 -28159712 + L2 LINE L2 2549 2854 -460 1965 157 0 10 chr5 174925820 174926125 -28159407 - AluJo SINE Alu -10 302 1 281 328 91 44 chr5 174926125 174926253 -28159279 + L2 LINE L2 2854 2975 -339 883 313 30 4 chr5 174926993 174927261 -28158271 - MLT1I LTR MaLR 0 409 135 231 275 58 0 chr5 174927380 174927449 -28158083 - Charlie8 DNA MER1_type -5 2412 2340 2052 109 20 14 chr5 174927587 174927880 -28157652 - AluSx SINE Alu -17 295 1 552 256 53 43 chr5 174929363 174929570 -28155962 - L2 LINE L2 -1 3312 3104 1328 145 33 9 chr5 174929626 174929840 -28155692 - MER20 DNA MER1_type 0 219 1 333 307 80 20 chr5 174929908 174930058 -28155474 + MIR SINE MIR 60 218 -44 243 341 141 12 chr5 174930117 174930287 -28155245 - MIR SINE MIR -67 195 4 1673 193 0 3 chr5 174931178 174931468 -28154064 + AluJo SINE Alu 1 289 -23 815 286 128 23 chr5 174931682 174932080 -28153452 + L1MC4a LINE L1 5506 5945 -1863 255 292 0 0 chr5 174932088 174932172 -28153360 + (CATA)n Simple_repeat Simple_repeat 1 84 0 281 369 89 14 chr5 174932803 174933017 -28152515 + L2 LINE L2 3038 3267 -5 281 336 65 0 chr5 174933167 174933274 -28152258 + MIR SINE MIR 78 191 -71 1012 182 94 0 chr5 174933302 174933494 -28152038 + Ricksha DNA DNA 90 299 -2947 * 2859 169 35 19 chr5 174933487 174934007 -28151525 + Ricksha DNA DNA 1824 2351 -895 406 119 17 0 chr5 174934003 174934062 -28151470 - Ricksha DNA DNA -1156 98 39 * 551 277 68 32 chr5 174934227 174934481 -28151051 + MIR SINE MIR 5 262 0 245 312 165 3 chr5 174934773 174934931 -28150601 - MIR SINE MIR -62 146 4 931 216 178 30 chr5 174934994 174935393 -28150139 - LTR37B LTR ERV1 -2 466 9 705 243 30 84 chr5 174935398 174935507 -28150025 - MIR SINE MIR -11 251 138 19167 51 0 0 chr5 174935507 174938518 -28147014 - L1PA6 LINE L1 -6 6148 3138 705 243 30 84 chr5 174938518 174938671 -28146861 - MIR SINE MIR -124 138 3 248 200 133 67 chr5 174938691 174938781 -28146751 + L2 LINE L2 3163 3258 -14 198 176 29 0 chr5 174938833 174938867 -28146665 - L2 LINE L2 -21 3292 3258 219 182 45 0 chr5 174938938 174938982 -28146550 - L2 LINE L2 -86 3186 3141 245 343 0 29 chr5 174940002 174940107 -28145425 + L2 LINE L2 3155 3256 -16 1040 175 23 0 chr5 174940815 174940992 -28144540 + MER58A DNA MER1_type 44 224 0 441 297 82 16 chr5 174941719 174941901 -28143631 - L2 LINE L2 -1 3312 3119 188 293 0 0 chr5 174941944 174941985 -28143547 + L2 LINE L2 3204 3244 -28 615 310 52 9 chr5 174942245 174942477 -28143055 + MIR SINE MIR 13 254 -8 662 231 31 12 chr5 174942479 174942639 -28142893 + MIR SINE MIR 100 262 0 333 259 47 0 chr5 174943047 174943132 -28142400 + L2 LINE L2 3183 3271 -42 375 309 100 19 chr5 174943236 174943495 -28142037 + MLT1K LTR MaLR 143 422 -166 615 213 55 18 chr5 174943720 174943884 -28141648 + Ricksha DNA DNA 1 170 -1876 * 8348 153 28 7 chr5 174943781 174945164 -28140368 - Ricksha DNA DNA -13 3233 1821 1054 149 0 6 chr5 174945162 174945330 -28140202 - Ricksha DNA DNA -2957 289 123 * 603 264 14 7 chr5 174945332 174945480 -28140052 - MIR SINE MIR -85 177 29 449 280 45 8 chr5 174945509 174945641 -28139891 + MER5A DNA MER1_type 8 144 -45 240 35 0 0 chr5 174946512 174946541 -28138991 + (TTG)n Simple_repeat Simple_repeat 2 30 0 627 267 31 58 chr5 174948626 174948813 -28136719 - MIR SINE MIR -10 252 72 1809 166 3 23 chr5 174948813 174949115 -28136417 + AluJb SINE Alu 3 298 -14 627 267 31 58 chr5 174949115 174949185 -28136347 - MIR SINE MIR -190 72 2 502 191 130 0 chr5 174949586 174949701 -28135831 - MER5A DNA MER1_type -1 188 59 921 146 23 58 chr5 174949709 174949880 -28135652 + FRAM SINE Alu 10 174 -2 352 236 14 0 chr5 174949894 174949966 -28135566 - MER5A DNA MER1_type -113 76 4 327 284 12 0 chr5 174950027 174950108 -28135424 - MIR3 SINE MIR -51 157 76 303 28 0 0 chr5 174950170 174950206 -28135326 + (TA)n Simple_repeat Simple_repeat 1 36 0 * 381 75 0 0 chr5 174950205 174950258 -28135274 + (CA)n Simple_repeat Simple_repeat 2 54 0 227 262 87 68 chr5 174950590 174950693 -28134839 + MIR3 SINE MIR 90 194 -14 23 54 0 0 chr5 174950989 174951026 -28134506 + AT_rich Low_complexity Low_complexity 1 37 0 826 124 12 62 chr5 174952156 174952317 -28133215 - MER39B LTR ERV1 0 653 501 1616 138 67 4 chr5 174952317 174952585 -28132947 + MER49 LTR ERV1 1 285 -638 1208 207 0 9 chr5 174952647 174952879 -28132653 + MER4D LTR ERV1 549 778 -125 1612 195 0 20 chr5 174952879 174953181 -28132351 + AluJb SINE Alu 1 296 -16 50 80 0 0 chr5 174953186 174953299 -28132233 + AT_rich Low_complexity Low_complexity 1 113 0 2471 131 11 0 chr5 174953326 174953684 -28131848 - L1PB1 LINE L1 -8 6859 6498 325 53 32 53 chr5 174953695 174953790 -28131742 + (TA)n Simple_repeat Simple_repeat 2 94 0 12019 185 9 18 chr5 174953790 174954811 -28130721 - L1PB1 LINE L1 -360 6507 5478 2361 117 0 0 chr5 174954811 174955119 -28130413 - AluSx SINE Alu -2 310 3 12019 185 9 18 chr5 174955119 174957158 -28128374 - L1PB1 LINE L1 -1389 5478 3477 1176 84 13 0 chr5 174957177 174957331 -28128201 - L1PA7 LINE L1 -86 6068 5913 1885 156 44 6 chr5 174957928 174958267 -28127265 - L1PB1 LINE L1 -3375 3487 3136 7823 135 45 13 chr5 174958740 174960186 -28125346 - L1PB1 LINE L1 -3735 3127 1629 3451 125 183 141 chr5 174960186 174961223 -28124309 + pTR5 LTR ERV1 375 2427 -11 1662 219 86 12 chr5 174961224 174962626 -28122906 - L1PB1 LINE L1 -5203 1660 6 696 203 14 21 chr5 174962657 174962800 -28122732 + MER4D LTR ERV1 762 903 0 3282 133 14 6 chr5 174962804 174963300 -28122232 - MER39B LTR ERV1 -153 500 1 2618 158 39 2 chr5 174963402 174963813 -28121719 - MSTB LTR MaLR 0 426 1 2058 96 0 0 chr5 174964396 174964657 -28120875 - AluSq SINE Alu -15 298 38 367 193 45 23 chr5 174964755 174964843 -28120689 + MER88 LTR ERVL 79 168 -296 * 1216 252 61 35 chr5 174964767 174965191 -28120341 - MER74A LTR ERVL -70 488 54 1572 168 128 31 chr5 174965205 174965436 -28120096 - MLT1A1 LTR MaLR 0 365 91 2491 127 72 12 chr5 174965436 174965837 -28119695 - MSTB LTR MaLR 0 426 2 1572 168 128 31 chr5 174965837 174965932 -28119600 - MLT1A1 LTR MaLR -274 91 7 1124 142 100 0 chr5 174966590 174966780 -28118752 - MER3 DNA MER1_type 0 209 1 222 353 76 8 chr5 174966935 174967054 -28118478 + MIR SINE MIR 10 136 -126 516 281 103 50 chr5 174967176 174967514 -28118018 + MLT1L LTR MaLR 210 486 -25 1161 269 25 72 chr5 174967553 174968070 -28117462 - MLT1J LTR MaLR -10 501 9 380 207 228 7 chr5 174968231 174968376 -28117156 + MER113 DNA MER1_type? 1 177 -344 245 252 30 92 chr5 174968955 174969086 -28116446 + MIR SINE MIR 99 221 -41 923 239 83 0 chr5 174969138 174969368 -28116164 + MIR SINE MIR 13 261 -1 516 232 268 0 chr5 174969792 174969930 -28115602 + MER96 DNA MER1_type 1 175 0 1645 142 70 67 chr5 174970992 174971366 -28114166 + THE1C LTR MaLR 1 375 0 1731 240 33 4 chr5 174971445 174971958 -28113574 + L1MB7 LINE L1 5654 6181 -3 315 49 0 0 chr5 174972004 174972045 -28113487 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 109 22 65 chr5 174972045 174972091 -28113441 + MIR SINE MIR 219 262 0 1053 139 92 0 chr5 174973257 174973430 -28112102 + MER5A DNA MER1_type 1 189 0 4107 145 23 6 chr5 174973872 174974829 -28110703 + L1MA4 LINE L1 4588 5575 -725 1805 133 21 11 chr5 174974829 174975156 -28110376 + AluSx SINE Alu 1 330 0 4107 145 23 6 chr5 174975156 174975607 -28109925 + L1MA4 LINE L1 5575 6017 -283 348 153 71 0 chr5 174975625 174975710 -28109822 + L1MB3 LINE L1 6091 6181 -2 21 0 0 0 chr5 174975796 174975817 -28109715 + AT_rich Low_complexity Low_complexity 1 21 0 1320 218 99 84 chr5 174976066 174976793 -28108739 + L2 LINE L2 2557 3311 -2 189 232 161 0 chr5 174976813 174976869 -28108663 - L2 LINE L2 -50 3222 3158 2299 89 58 19 chr5 174978833 174979194 -28106338 - THE1C LTR MaLR 0 375 1 218 196 59 10 chr5 174979216 174979318 -28106214 + (TA)n Simple_repeat Simple_repeat 1 107 0 517 303 87 15 chr5 174979712 174979907 -28105625 + MIR SINE MIR 17 225 -37 251 335 19 43 chr5 174981046 174981207 -28104325 - MLT1K LTR MaLR -329 259 103 182 317 33 17 chr5 174981525 174981585 -28103947 + L2 LINE L2 2785 2845 -469 2242 119 0 0 chr5 174981683 174981986 -28103546 - AluSc SINE Alu -2 307 5 1247 257 74 74 chr5 174982012 174982490 -28103042 - L1MCc LINE L1 -4259 2863 2386 180 0 0 0 chr5 174982490 174982510 -28103022 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1558 138 9 0 chr5 174982517 174982748 -28102784 - AluSx SINE Alu -75 237 5 1247 257 74 74 chr5 174982748 174983718 -28101814 - L1MCc LINE L1 -4742 2380 1199 1402 295 33 23 chr5 174983806 174984379 -28101153 - L1MCc LINE L1 -5812 611 33 1622 170 26 85 chr5 174984379 174984767 -28100765 - MLT1A1 LTR MaLR 0 365 1 644 289 137 0 chr5 174984795 174984999 -28100533 - MIR SINE MIR 0 262 31 252 303 37 28 chr5 174985030 174985139 -28100393 + L2 LINE L2 3163 3272 0 2390 106 0 0 chr5 174985141 174985444 -28100088 + AluSg SINE Alu 1 303 -7 210 171 0 0 chr5 174985594 174985635 -28099897 + T-rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr5 174986439 174986479 -28099053 + AT_rich Low_complexity Low_complexity 1 40 0 607 246 50 17 chr5 174986498 174986677 -28098855 - MIR SINE MIR -64 198 14 214 310 129 0 chr5 174986767 174986883 -28098649 + L2 LINE L2 2132 2262 -1052 421 273 101 0 chr5 174986912 174987051 -28098481 - L2 LINE L2 -3 3310 3158 754 292 20 10 chr5 174987073 174987374 -28098158 - L1MC/D LINE L1 -2004 5804 5501 2150 35 15 0 chr5 174987459 174987718 -28097814 + L1PA5 LINE L1 5886 6148 -6 2235 106 0 16 chr5 174987892 174988204 -28097328 + AluSc SINE Alu 1 307 -2 37 0 0 0 chr5 174988326 174988363 -28097169 + AT_rich Low_complexity Low_complexity 1 37 0 42178 39 2 1 chr5 174988363 174994513 -28091019 - L1PA3 LINE L1 -3 6152 2 560 150 83 0 chr5 174994520 174994640 -28090892 - L1MA4 LINE L1 -6 6294 6165 1113 248 162 39 chr5 174994828 174995323 -28090209 - MLT1G1 LTR MaLR 0 595 1 352 328 35 23 chr5 174995921 174996092 -28089440 - MIR SINE MIR -56 206 34 188 217 116 43 chr5 174996087 174996156 -28089376 - MIR3 SINE MIR -48 160 87 * 675 296 41 75 chr5 174996737 174997203 -28088329 + LTR67 LTR ERVL 97 546 -11 413 152 0 0 chr5 174997523 174997589 -28087943 + THE1C LTR MaLR 1 66 -309 344 137 32 63 chr5 174997556 174997651 -28087881 + THE1B LTR MaLR 271 362 -2 * 297 388 117 5 chr5 174997752 174997966 -28087566 + L2 LINE L2 2596 2833 -481 30 0 0 0 chr5 174998045 174998075 -28087457 + AT_rich Low_complexity Low_complexity 1 30 0 1613 195 14 0 chr5 174998075 174998357 -28087175 - AluJo SINE Alu -26 286 1 2238 114 0 0 chr5 174998360 174998650 -28086882 - AluSc SINE Alu -19 290 1 809 144 30 15 chr5 174998716 174998848 -28086684 + FRAM SINE Alu 36 169 -7 378 375 38 0 chr5 174998944 174999104 -28086428 - MIR SINE MIR -16 246 81 41354 45 3 2 chr5 174999107 175005256 -28080276 + L1PA4 LINE L1 1 6154 -1 32 0 0 0 chr5 175005257 175005289 -28080243 + AT_rich Low_complexity Low_complexity 1 32 0 285 350 15 29 chr5 175005532 175005669 -28079863 - MER5A DNA MER1_type -27 162 28 255 329 51 15 chr5 175005910 175006047 -28079485 + MER117 DNA MER1_type 20 161 -36 738 256 35 16 chr5 175006680 175006934 -28078598 + MIR SINE MIR 2 260 -2 279 218 209 45 chr5 175006960 175007070 -28078462 + MIR3 SINE MIR 45 172 -36 297 310 60 69 chr5 175008071 175008303 -28077229 + MLT1H LTR MaLR 125 354 -195 226 385 45 6 chr5 175009229 175009385 -28076147 + L1MEc LINE L1 221 382 -6014 234 228 76 35 chr5 175009854 175009999 -28075533 + L1MEc LINE L1 653 803 -5402 1509 229 79 30 chr5 175010034 175010427 -28075105 + L1ME1 LINE L1 5631 6057 -109 2080 108 7 0 chr5 175010427 175010732 -28074800 + AluSx SINE Alu 1 307 0 1509 229 79 30 chr5 175010732 175010828 -28074704 + L1ME1 LINE L1 6057 6147 -19 1148 259 94 56 chr5 175010879 175011528 -28074004 + L1MC4a LINE L1 5277 5945 -1863 270 251 29 103 chr5 175012193 175012368 -28073164 - MIR SINE MIR 0 262 101 362 256 45 60 chr5 175012394 175012527 -28073005 - MIR SINE MIR -119 143 13 642 270 154 12 chr5 175012544 175012863 -28072669 - L3 LINE CR1 -5 1572 1209 29 0 0 0 chr5 175012928 175012957 -28072575 + AT_rich Low_complexity Low_complexity 1 29 0 1150 190 85 23 chr5 175012992 175013299 -28072233 - L1ME2 LINE L1 -9 6155 5830 259 188 16 47 chr5 175013301 175013365 -28072167 - Tigger5 DNA MER2_type 0 2323 2262 383 225 22 0 chr5 175013414 175013503 -28072029 - Tigger5 DNA MER2_type -2231 92 2 727 196 54 5 chr5 175013574 175013758 -28071774 - L1ME2 LINE L1 -377 5787 5595 389 231 29 10 chr5 175013800 175013904 -28071628 + L1ME LINE L1 5414 5519 -645 336 273 191 24 chr5 175013935 175014144 -28071388 - L3 LINE CR1 -504 1073 830 337 337 34 51 chr5 175014384 175014559 -28070973 - MIR SINE MIR -71 191 20 553 249 173 10 chr5 175014845 175015042 -28070490 + MIR SINE MIR 22 250 -12 279 79 0 0 chr5 175015050 175015088 -28070444 + (CAT)n Simple_repeat Simple_repeat 2 39 0 907 192 17 17 chr5 175016654 175016831 -28068701 + MER45A DNA AcHobo 2 178 0 297 75 0 0 chr5 175016841 175016881 -28068651 + (CA)n Simple_repeat Simple_repeat 2 41 0 442 286 231 0 chr5 175016945 175017148 -28068384 + MIR SINE MIR 6 255 -7 357 233 75 7 chr5 175017310 175017456 -28068076 + MER113 DNA MER1_type? 1 156 -365 373 310 0 9 chr5 175017845 175017958 -28067574 + MER5A DNA MER1_type 1 112 -77 362 290 61 3 chr5 175018027 175018221 -28067311 - MIR SINE MIR 0 262 3 402 351 13 7 chr5 175018596 175018747 -28066785 + L3 LINE CR1 1425 1576 -1 303 209 29 9 chr5 175018803 175018908 -28066624 + GA-rich Low_complexity Low_complexity 2 108 0 23 33 0 0 chr5 175019219 175019249 -28066283 + AT_rich Low_complexity Low_complexity 1 30 0 2442 135 14 49 chr5 175019609 175020054 -28065478 + MSTB1 LTR MaLR 1 429 -3 2319 84 0 43 chr5 175020143 175020466 -28065066 - AluY SINE Alu -2 309 1 2078 121 13 3 chr5 175020809 175021116 -28064416 - AluSx SINE Alu 0 312 3 302 351 77 40 chr5 175021161 175021514 -28064018 - HAL1 LINE L1 -1047 1460 1095 354 356 14 14 chr5 175021879 175022025 -28063507 - Charlie8 DNA MER1_type -2271 146 1 305 219 12 0 chr5 175022392 175022474 -28063058 - Charlie5 DNA MER1_type -164 2448 2366 2302 103 0 3 chr5 175022535 175022835 -28062697 - AluSx SINE Alu -13 299 1 845 179 71 5 chr5 175023566 175023778 -28061754 + MER33 DNA MER1_type 23 248 -76 731 266 135 25 chr5 175024161 175024606 -28060926 + L1ME4a LINE L1 5354 5847 -274 211 299 75 51 chr5 175024620 175024914 -28060618 + L2 LINE L2 2644 2944 -370 180 298 0 0 chr5 175025178 175025225 -28060307 + L2 LINE L2 3226 3272 0 232 196 155 41 chr5 175025326 175025423 -28060109 + L1ME4a LINE L1 5961 6068 -53 25 0 0 28 chr5 175025451 175025473 -28060059 + AT_rich Low_complexity Low_complexity 1 23 -12 2561 89 14 3 chr5 175025473 175025820 -28059712 + L1PA13 LINE L1 5813 6163 0 25 0 0 28 chr5 175025820 175025833 -28059699 + AT_rich Low_complexity Low_complexity 23 35 0 295 323 32 48 chr5 175026531 175026655 -28058877 - L2 LINE L2 -2 3270 3149 1927 142 45 3 chr5 175026743 175027032 -28058500 - AluSx SINE Alu -11 301 1 321 259 27 147 chr5 175027641 175027756 -28057776 + L3 LINE CR1 1176 1253 -324 4173 98 11 2 chr5 175027756 175028325 -28057207 + L1PA11 LINE L1 5599 6172 -2 321 259 27 147 chr5 175028325 175028433 -28057099 + L3 LINE CR1 1253 1372 -205 197 205 0 0 chr5 175028934 175028973 -28056559 + L2 LINE L2 3216 3254 -18 400 328 109 30 chr5 175029639 175029968 -28055564 - L3 LINE CR1 -12 1565 1211 24 77 0 0 chr5 175031019 175031071 -28054461 + AT_rich Low_complexity Low_complexity 1 52 0 3203 129 62 6 chr5 175031142 175031654 -28053878 + LTR1B LTR ERV1 1 541 -285 742 180 0 16 chr5 175031654 175031782 -28053750 + LTR1B LTR ERV1 701 826 0 248 354 0 0 chr5 175033140 175033219 -28052313 - L2 LINE L2 0 3313 3235 652 284 35 26 chr5 175033441 175033673 -28051859 + MIR SINE MIR 17 250 -12 249 296 122 0 chr5 175033694 175033809 -28051723 - L2 LINE L2 -317 2955 2827 627 244 45 11 chr5 175034608 175034784 -28050748 + MIR SINE MIR 16 197 -65 1692 197 50 64 chr5 175034785 175035303 -28050229 + MER113 DNA MER1_type? 11 521 0 3840 171 32 14 chr5 175035665 175036414 -28049118 + LTR1B LTR ERV1 1 783 -2 289 263 121 10 chr5 175036533 175036632 -28048900 + L2 LINE L2 3099 3208 -64 431 111 0 12 chr5 175036681 175036762 -28048770 + (GGAA)n Simple_repeat Simple_repeat 4 83 0 261 228 119 5 chr5 175038021 175038155 -28047377 + MIR SINE MIR 104 256 -6 9441 25 2 3 chr5 175038183 175039285 -28046247 - L1PA3 LINE L1 -1419 4727 3627 7832 17 3 1 chr5 175039285 175040719 -28044813 + L1PA3 LINE L1 4750 6185 0 2051 108 50 0 chr5 175040917 175041195 -28044337 + AluSg SINE Alu 1 292 -18 738 155 95 40 chr5 175041200 175041348 -28044184 + MER97c DNA MER1_type? 21 176 -914 325 229 0 11 chr5 175041893 175041996 -28043536 - MIR SINE MIR -69 139 40 262 294 0 0 chr5 175042143 175042211 -28043321 + L2 LINE L2 3246 3313 0 202 266 53 75 chr5 175042218 175042312 -28043220 - L3 LINE CR1 -88 1489 1398 22 0 0 0 chr5 175042497 175042519 -28043013 + AT_rich Low_complexity Low_complexity 1 22 0 2075 107 0 11 chr5 175042905 175043185 -28042347 + AluSx SINE Alu 25 301 -11 193 330 23 0 chr5 175043190 175043278 -28042254 - MIR SINE MIR -65 197 108 377 342 36 25 chr5 175043334 175043530 -28042002 - L2 LINE L2 -31 3241 3044 659 166 97 41 chr5 175043567 175043712 -28041820 + MER97c DNA MER1_type? 21 173 -917 192 182 0 0 chr5 175043794 175043838 -28041694 + (CA)n Simple_repeat Simple_repeat 1 44 0 1975 183 107 38 chr5 175044370 175044790 -28040742 - MLT2B1 LTR ERVL -71 449 1 1950 124 33 4 chr5 175044790 175045064 -28040468 + AluSx SINE Alu 1 282 -30 234 62 0 0 chr5 175045066 175045098 -28040434 + (TTAAA)n Simple_repeat Simple_repeat 3 34 0 394 331 87 0 chr5 175045813 175045985 -28039547 + L2 LINE L2 3121 3307 -6 6078 146 190 35 chr5 175046855 175048217 -28037315 - pTR5 LTR ERV1 -143 2295 723 792 206 15 40 chr5 175048257 175048456 -28037076 - MER117 DNA MER1_type -3 194 1 714 224 98 23 chr5 175049681 175049895 -28035637 - MIR SINE MIR -12 250 21 1932 156 13 3 chr5 175050210 175050511 -28035021 - AluJo SINE Alu -8 304 1 2312 97 0 3 chr5 175050903 175051201 -28034331 + AluSx SINE Alu 1 297 -15 486 290 49 82 chr5 175051756 175052121 -28033411 + LTR67 LTR ERVL 179 531 -26 3882 119 81 0 chr5 175052361 175052965 -28032567 + MER39B LTR ERV1 1 653 0 290 282 64 0 chr5 175053393 175053471 -28032061 - L2 LINE L2 -27 3245 3163 2117 112 169 8 chr5 175054275 175054642 -28030890 - MSTA LTR MaLR 0 428 3 218 306 0 0 chr5 175055110 175055172 -28030360 + L2 LINE L2 3205 3266 -47 197 0 71 0 chr5 175055192 175055220 -28030312 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2005 106 0 4 chr5 175055221 175055486 -28030046 - AluSq SINE Alu -49 264 1 373 296 156 15 chr5 175055510 175055709 -28029823 - MIR SINE MIR -34 228 2 347 352 47 14 chr5 175055830 175056043 -28029489 + L2 LINE L2 2566 2785 -529 238 243 14 0 chr5 175056039 175056113 -28029419 + MER5A DNA MER1_type 22 96 -93 * 254 296 62 0 chr5 175056578 175056659 -28028873 + L2 LINE L2 3208 3293 -20 1837 101 40 4 chr5 175057051 175057325 -28028207 + AluSg SINE Alu 25 307 0 306 326 82 16 chr5 175057782 175057966 -28027566 - MER117 DNA MER1_type -1 196 1 253 352 9 9 chr5 175058261 175058369 -28027163 - MIR SINE MIR -78 130 23 233 29 29 0 chr5 175058474 175058508 -28027024 + (CA)n Simple_repeat Simple_repeat 2 36 0 526 89 0 25 chr5 175058691 175058770 -28026762 + L1MA1 LINE L1 6219 6295 -7 24 0 0 0 chr5 175058823 175058847 -28026685 + AT_rich Low_complexity Low_complexity 1 24 0 2349 91 0 3 chr5 175058858 175059154 -28026378 + AluSx SINE Alu 1 295 -17 255 245 7 0 chr5 175059176 175059332 -28026200 + (CA)n Simple_repeat Simple_repeat 1 157 0 677 273 39 60 chr5 175059976 175060258 -28025274 + MLT1L LTR MaLR 5 280 -335 1259 144 62 10 chr5 175060318 175060513 -28025019 - AluJb SINE Alu -22 290 86 1593 184 102 105 chr5 175060566 175061157 -28024375 + MLT1G LTR MaLR 2 590 0 485 241 51 15 chr5 175061158 175061295 -28024237 + MLT1L LTR MaLR 427 568 -47 762 162 104 2 chr5 175061304 175061457 -28024075 - MLT1B LTR MaLR -2 386 203 491 179 108 38 chr5 175061454 175061616 -28023916 + MLT1L LTR MaLR 242 432 -158 * 1084 171 0 34 chr5 175061641 175061846 -28023686 - MLT1B LTR MaLR -192 198 1 1727 145 64 14 chr5 175062057 175062340 -28023192 - AluJb SINE Alu -15 297 1 302 269 108 0 chr5 175062820 175062950 -28022582 + L1MC4a LINE L1 5770 5913 -1895 1335 263 127 6 chr5 175063105 175063765 -28021767 + L1MDa LINE L1 1366 2207 -4383 905 188 6 6 chr5 175064650 175064810 -28020722 + FRAM SINE Alu 1 160 -6 2582 57 0 0 chr5 175065079 175065378 -28020154 - AluY SINE Alu -10 301 3 269 254 0 0 chr5 175066415 175066478 -28019054 - MIR SINE MIR 0 262 200 197 250 0 0 chr5 175066492 175066532 -28019000 + MIR3 SINE MIR 120 159 -49 1019 196 50 50 chr5 175066537 175066756 -28018776 + MER58A DNA MER1_type 6 224 0 1764 106 31 75 chr5 175067128 175067261 -28018271 - L1PA14 LINE L1 -2 6159 6022 2257 123 7 0 chr5 175067261 175067571 -28017961 - AluSx SINE Alu 0 312 1 1764 106 31 75 chr5 175067571 175067759 -28017773 - L1PA14 LINE L1 -139 6022 5852 791 168 0 28 chr5 175068727 175068870 -28016662 - FAM SINE Alu -5 44 1 365 191 29 57 chr5 175069339 175069444 -28016088 - MIR SINE MIR -48 214 113 198 0 0 0 chr5 175069902 175069924 -28015608 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 496 131 12 0 chr5 175071754 175071838 -28013694 - L1MB8 LINE L1 -1 6177 6093 2030 155 9 77 chr5 175071844 175072019 -28013513 - L1MB4 LINE L1 0 6180 5995 2156 133 0 0 chr5 175072019 175072312 -28013220 - AluSq SINE Alu -20 293 1 2030 155 9 77 chr5 175072312 175072601 -28012931 - L1MB4 LINE L1 -185 5995 5748 292 280 0 40 chr5 175073012 175073112 -28012420 + MIR3 SINE MIR 74 169 -39 2108 130 10 0 chr5 175073214 175073507 -28012025 + AluSx SINE Alu 1 296 -16 535 312 82 4 chr5 175074199 175074430 -28011102 + L2 LINE L2 2362 2610 -704 473 286 126 61 chr5 175074478 175074848 -28010684 + L3 LINE CR1 737 1144 -433 240 35 0 0 chr5 175074848 175074877 -28010655 + (TA)n Simple_repeat Simple_repeat 2 30 0 473 286 126 61 chr5 175074877 175074968 -28010564 + L3 LINE CR1 1144 1228 -349 602 301 70 27 chr5 175075089 175075388 -28010144 + L2 LINE L2 3002 3313 0 991 155 19 0 chr5 175075966 175076127 -28009405 + AluSg/x SINE Alu 135 298 -12 324 252 168 8 chr5 175076212 175076350 -28009182 - MIR SINE MIR -62 146 40 568 200 170 0 chr5 175076524 175076659 -28008873 + MER5A DNA MER1_type 32 189 0 793 245 48 39 chr5 175076907 175077115 -28008417 + MER63A DNA MER1_type 1 210 0 552 311 12 29 chr5 175077710 175077951 -28007581 - MIR SINE MIR -5 257 21 208 371 19 9 chr5 175078194 175078299 -28007233 + L3 LINE CR1 1065 1170 -407 971 256 124 28 chr5 175078354 175078709 -28006823 + MLT1J2 LTR MaLR 6 394 -56 213 294 72 72 chr5 175078730 175078782 -28006750 + L3 LINE CR1 1187 1238 -339 2675 133 10 0 chr5 175078782 175079181 -28006351 + MER57A LTR ERV1 1 403 0 213 294 72 72 chr5 175079181 175079279 -28006253 + L3 LINE CR1 1238 1340 -237 2120 130 21 26 chr5 175079279 175079656 -28005876 + THE1C LTR MaLR 1 375 0 213 294 72 72 chr5 175079656 175079725 -28005807 + L3 LINE CR1 1339 1407 -170 184 333 7 48 chr5 175079723 175079870 -28005662 + L2 LINE L2 2840 2980 -292 * 1135 230 24 115 chr5 175079889 175080429 -28005103 - L2 LINE L2 -5 3308 2818 330 303 42 106 chr5 175080440 175080614 -28004918 + L2 LINE L2 3015 3168 -104 3294 149 33 81 chr5 175080614 175081340 -28004192 + LTR8 LTR ERV1 1 691 0 330 303 42 106 chr5 175081340 175081429 -28004103 + L2 LINE L2 3168 3261 -11 276 268 0 12 chr5 175082046 175082129 -28003403 + MIR SINE MIR 75 155 -62 291 300 181 48 chr5 175082291 175082445 -28003087 + L2 LINE L2 2869 3001 -312 1954 179 14 8 chr5 175082445 175082808 -28002724 + MLT1A1 LTR MaLR 1 365 0 291 300 181 48 chr5 175082808 175083046 -28002486 + L2 LINE L2 3001 3313 0 5468 35 0 5 chr5 175083467 175084100 -28001432 - L1PA5 LINE L1 -1 6153 5524 2221 163 37 113 chr5 175084687 175085287 -28000245 + MLT2B3 LTR ERVL 1 554 0 550 279 69 21 chr5 175085509 175085742 -27999790 + MIR SINE MIR 2 245 -17 314 291 0 0 chr5 175087101 175087180 -27998352 - MIR3 SINE MIR -21 187 109 190 178 200 0 chr5 175087256 175087301 -27998231 + MIR SINE MIR 119 172 -90 181 333 0 0 chr5 175087590 175087641 -27997891 - L2 LINE L2 -16 3256 3206 * 292 303 20 10 chr5 175087634 175087733 -27997799 - MIR SINE MIR -138 124 25 4167 103 48 8 chr5 175088042 175088670 -27996862 + MER39B LTR ERV1 1 653 0 249 254 42 76 chr5 175088705 175088823 -27996709 - MIR SINE MIR -96 166 53 214 303 135 0 chr5 175088830 175088919 -27996613 + MIR3 SINE MIR 88 188 -20 2714 86 8 8 chr5 175089128 175089490 -27996042 + THE1B LTR MaLR 3 364 0 2651 110 0 0 chr5 175089511 175089866 -27995666 + THE1A LTR MaLR 1 355 0 12012 91 8 0 chr5 175089867 175091433 -27994099 + THE1A-int LTR MaLR 2 1580 0 2807 73 3 3 chr5 175091433 175091788 -27993744 + THE1A LTR MaLR 1 355 0 946 217 98 45 chr5 175091902 175092261 -27993271 - L2 LINE L2 -1 3312 2935 386 253 126 26 chr5 175092347 175092537 -27992995 - L2 LINE L2 -568 2746 2538 2295 147 114 50 chr5 175092694 175092781 -27992751 - MLT1D LTR MaLR 0 505 425 2103 94 4 4 chr5 175092781 175093048 -27992484 + AluJb SINE Alu 15 281 -31 285 75 0 0 chr5 175093049 175093089 -27992443 + (CA)n Simple_repeat Simple_repeat 2 41 0 2295 147 114 50 chr5 175093089 175093474 -27992058 - MLT1D LTR MaLR -79 426 1 1865 148 47 0 chr5 175094190 175094528 -27991004 + L1MA8 LINE L1 5931 6284 -7 1623 167 36 18 chr5 175094555 175094836 -27990696 + AluJo SINE Alu 1 286 -26 608 236 0 58 chr5 175094860 175095051 -27990481 + MIR SINE MIR 56 235 -27 572 288 14 36 chr5 175095908 175096127 -27989405 - MIR SINE MIR -47 215 2 2010 118 71 0 chr5 175096623 175096792 -27988740 + L1PA16 LINE L1 5806 5962 -204 2088 116 25 0 chr5 175096792 175097076 -27988456 + AluSx SINE Alu 1 291 -21 2010 118 71 0 chr5 175097076 175097228 -27988304 + L1PA16 LINE L1 5962 6150 -16 493 171 0 0 chr5 175097580 175097668 -27987864 + L1MA5A LINE L1 6208 6295 -2 458 275 29 53 chr5 175097695 175097866 -27987666 + MIR SINE MIR 26 192 -70 336 300 86 43 chr5 175098649 175099074 -27986458 - MLT1J2 LTR MaLR 0 446 3 745 291 27 58 chr5 175099338 175099868 -27985664 + L1ME4a LINE L1 5549 6121 0 2370 104 7 0 chr5 175099897 175100204 -27985328 + AluSx SINE Alu 2 310 -2 268 176 37 120 chr5 175100503 175100611 -27984921 + MER91C DNA MER1_type 24 122 -18 235 310 38 51 chr5 175100760 175100918 -27984614 - L2 LINE L2 -560 2754 2599 752 293 29 4 chr5 175101002 175101241 -27984291 - MIR SINE MIR -11 251 7 4266 121 3 2 chr5 175101306 175101936 -27983596 + L1PA13 LINE L1 5526 6156 -7 9959 36 2 0 chr5 175102026 175103987 -27981545 + L1PA3 LINE L1 4186 6155 0 834 255 88 21 chr5 175104284 175104523 -27981009 - MIR SINE MIR -6 256 2 612 222 136 0 chr5 175104534 175104696 -27980836 - MIR SINE MIR -3 259 76 876 237 69 47 chr5 175104912 175105186 -27980346 + MLT1I LTR MaLR 57 336 -73 258 286 34 42 chr5 175105246 175105365 -27980167 - MIR SINE MIR -75 133 16 187 293 38 19 chr5 175106032 175106138 -27979394 + L2 LINE L2 2957 3064 -208 484 235 10 100 chr5 175106254 175106335 -27979197 + MER117 DNA MER1_type 12 99 -98 1475 159 81 44 chr5 175106335 175106480 -27979052 + AluJo SINE Alu 1 139 -173 2210 111 3 19 chr5 175106480 175106795 -27978737 + AluSq SINE Alu 1 310 -3 1475 159 81 44 chr5 175106795 175106944 -27978588 + AluJo SINE Alu 139 306 -6 484 235 10 100 chr5 175106944 175107062 -27978470 + MER117 DNA MER1_type 99 193 -4 367 228 168 10 chr5 175107666 175107767 -27977765 + MER103 DNA DNA 3 119 -47 547 297 106 4 chr5 175107856 175108092 -27977440 + MIR SINE MIR 3 262 0 1135 242 107 0 chr5 175108145 175108455 -27977077 - LTR16A LTR ERVL -5 445 103 226 140 175 0 chr5 175108648 175108705 -27976827 - L2 LINE L2 0 3313 3247 2615 157 60 60 chr5 175109395 175109980 -27975552 + MER34C LTR ERV1 1 585 0 236 221 134 18 chr5 175110066 175110196 -27975336 - MIR SINE MIR -79 129 40 1748 184 11 28 chr5 175110546 175110558 -27974974 - MER4D LTR ERV1 -8 895 884 1836 149 14 0 chr5 175110558 175110839 -27974693 - AluJb SINE Alu -27 285 1 1748 184 11 28 chr5 175110839 175111179 -27974353 - MER4D LTR ERV1 -19 884 549 1570 170 57 14 chr5 175111214 175111322 -27974210 - MER49 LTR ERV1 -629 294 192 2494 77 6 0 chr5 175111322 175111633 -27973899 + AluSp SINE Alu 1 313 0 1570 170 57 14 chr5 175111633 175111806 -27973726 - MER49 LTR ERV1 -731 192 1 443 273 16 8 chr5 175111940 175112061 -27973471 - L2 LINE L2 -5 3267 3146 393 294 15 34 chr5 175112120 175112324 -27973208 + L1ME LINE L1 5529 5728 -393 455 0 0 18 chr5 175112334 175112390 -27973142 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 685 211 5 18 chr5 175112412 175112594 -27972938 - MER93b LTR ERV1 -38 335 124 571 209 115 14 chr5 175112577 175112725 -27972807 - MLT1A1 LTR MaLR -202 163 1 * 216 344 238 0 chr5 175113157 175113308 -27972224 + MIR SINE MIR 1 187 -75 741 218 27 27 chr5 175113742 175113930 -27971602 - MER5A DNA MER1_type 0 189 2 1750 128 89 45 chr5 175114748 175115107 -27970425 + THE1C LTR MaLR 1 375 0 185 318 0 0 chr5 175115180 175115246 -27970286 - L2 LINE L2 -5 3308 3243 508 120 98 0 chr5 175115369 175115461 -27970071 - MIR SINE MIR -13 249 149 191 138 0 0 chr5 175116224 175116253 -27969279 + MIR SINE MIR 119 147 -115 400 279 82 72 chr5 175116281 175116513 -27969019 - MIR SINE MIR -9 253 18 5129 129 35 18 chr5 175117284 175118167 -27967365 - MER4D LTR ERV1 -5 898 1 470 187 0 65 chr5 175118225 175118302 -27967230 + L2 LINE L2 3192 3262 -51 2803 94 3 0 chr5 175118302 175118665 -27966867 + THE1B LTR MaLR 1 364 0 470 187 0 65 chr5 175118665 175118694 -27966838 + L2 LINE L2 3262 3291 -22 249 192 0 19 chr5 175118726 175118778 -27966754 + MLT1E LTR MaLR 1 51 -603 * 1987 172 85 30 chr5 175118777 175119280 -27966252 - LTR49 LTR ERV1 -35 560 81 1078 255 90 21 chr5 175119280 175119613 -27965919 + MLT1E LTR MaLR 44 399 -194 1313 213 40 41 chr5 175119621 175119953 -27965579 + L1M4c LINE L1 2079 2410 -3972 811 234 6 0 chr5 175119953 175120120 -27965412 + FAM SINE Alu 1 168 -7 1313 213 40 41 chr5 175120120 175120462 -27965070 + L1M4c LINE L1 2410 2758 -3624 986 195 109 52 chr5 175120465 175120849 -27964683 + L1MC5 LINE L1 7507 7912 -49 1888 150 7 3 chr5 175120865 175121158 -27964374 - AluJb SINE Alu -18 294 1 214 250 0 0 chr5 175121228 175121280 -27964252 - L2 LINE L2 0 3313 3262 274 296 111 0 chr5 175121418 175121526 -27964006 - MIR3 SINE MIR -8 200 81 703 303 68 0 chr5 175121540 175121774 -27963758 - MIR SINE MIR -5 257 8 180 77 0 0 chr5 175121834 175121860 -27963672 + (GA)n Simple_repeat Simple_repeat 2 27 0 557 239 0 30 chr5 175122247 175122381 -27963151 + MIR3 SINE MIR 33 162 -46 1606 163 58 32 chr5 175122541 175122885 -27962647 + MLT1A1 LTR MaLR 1 353 -12 6436 129 13 9 chr5 175123700 175124743 -27960789 + Tigger1 DNA MER2_type 1 1048 -1370 819 136 0 0 chr5 175124744 175124876 -27960656 + L1 LINE L1 4795 4926 -1220 * 13558 192 17 7 chr5 175124869 175129107 -27956425 + L1P5 LINE L1 2191 6503 -364 2206 141 0 3 chr5 175129107 175129420 -27956112 + AluSx SINE Alu 1 312 0 256 198 12 12 chr5 175129427 175129508 -27956024 + (TA)n Simple_repeat Simple_repeat 2 82 0 324 264 11 11 chr5 175129510 175129597 -27955935 - L1MC4 LINE L1 -1340 6702 6616 1956 118 71 0 chr5 175130079 175130248 -27955284 + L1PA16 LINE L1 5806 5962 -204 2063 116 25 0 chr5 175130248 175130532 -27955000 + AluSx SINE Alu 1 291 -21 1956 118 71 0 chr5 175130532 175130684 -27954848 + L1PA16 LINE L1 5962 6150 -16 465 171 0 0 chr5 175131038 175131126 -27954406 + L1MA5A LINE L1 6208 6295 -2 507 257 29 57 chr5 175131149 175131324 -27954208 + MIR SINE MIR 23 192 -70 289 266 62 26 chr5 175132157 175132270 -27953262 - MLT1J2 LTR MaLR -43 407 291 608 294 19 45 chr5 175132804 175133269 -27952263 + L1ME4a LINE L1 5554 6052 -69 2363 104 7 0 chr5 175133355 175133662 -27951870 + AluSx SINE Alu 2 310 -2 297 176 37 120 chr5 175133961 175134069 -27951463 - MER91C DNA MER1_type -23 117 19 257 316 38 51 chr5 175134218 175134376 -27951156 - L2 LINE L2 -560 2754 2599 837 293 29 4 chr5 175134460 175134699 -27950833 - MIR SINE MIR -11 251 7 4157 121 3 2 chr5 175134764 175135394 -27950138 + L1PA13 LINE L1 5526 6156 -7 9812 25 0 7 chr5 175135516 175137453 -27948079 + L1PA4 LINE L1 4225 6154 -1 32 0 0 0 chr5 175137454 175137486 -27948046 + AT_rich Low_complexity Low_complexity 1 32 0 285 350 15 29 chr5 175137729 175137866 -27947666 - MER5A DNA MER1_type -27 162 28 255 329 51 15 chr5 175138107 175138244 -27947288 + MER117 DNA MER1_type 20 161 -36 738 256 35 16 chr5 175138877 175139131 -27946401 + MIR SINE MIR 2 260 -2 279 218 209 45 chr5 175139157 175139267 -27946265 + MIR3 SINE MIR 45 172 -36 297 310 60 69 chr5 175140268 175140500 -27945032 + MLT1H LTR MaLR 125 354 -195 226 385 45 6 chr5 175141426 175141582 -27943950 + L1MEc LINE L1 221 382 -6014 234 228 76 35 chr5 175142051 175142196 -27943336 + L1MEc LINE L1 653 803 -5402 1509 229 79 30 chr5 175142231 175142624 -27942908 + L1ME1 LINE L1 5631 6057 -109 2080 108 7 0 chr5 175142624 175142929 -27942603 + AluSx SINE Alu 1 307 0 1509 229 79 30 chr5 175142929 175143025 -27942507 + L1ME1 LINE L1 6057 6147 -19 1148 259 94 56 chr5 175143076 175143725 -27941807 + L1MC4a LINE L1 5277 5945 -1863 270 251 29 103 chr5 175144390 175144565 -27940967 - MIR SINE MIR 0 262 101 362 256 45 60 chr5 175144591 175144724 -27940808 - MIR SINE MIR -119 143 13 642 270 154 12 chr5 175144741 175145060 -27940472 - L3 LINE CR1 -5 1572 1209 29 0 0 0 chr5 175145125 175145154 -27940378 + AT_rich Low_complexity Low_complexity 1 29 0 1150 190 85 23 chr5 175145189 175145496 -27940036 - L1ME2 LINE L1 -9 6155 5830 259 188 16 47 chr5 175145498 175145562 -27939970 - Tigger5 DNA MER2_type 0 2323 2262 383 225 22 0 chr5 175145611 175145700 -27939832 - Tigger5 DNA MER2_type -2231 92 2 727 196 54 5 chr5 175145771 175145955 -27939577 - L1ME2 LINE L1 -377 5787 5595 389 231 29 10 chr5 175145997 175146101 -27939431 + L1ME LINE L1 5414 5519 -643 336 273 191 24 chr5 175146132 175146341 -27939191 - L3 LINE CR1 -504 1073 830 337 337 34 51 chr5 175146581 175146756 -27938776 - MIR SINE MIR -71 191 20 553 249 173 10 chr5 175147042 175147239 -27938293 + MIR SINE MIR 22 250 -12 279 79 0 0 chr5 175147247 175147285 -27938247 + (CAT)n Simple_repeat Simple_repeat 2 39 0 907 192 17 17 chr5 175148851 175149028 -27936504 + MER45A DNA AcHobo 2 178 0 297 75 0 0 chr5 175149038 175149078 -27936454 + (CA)n Simple_repeat Simple_repeat 2 41 0 442 286 231 0 chr5 175149142 175149345 -27936187 + MIR SINE MIR 6 255 -7 357 233 75 7 chr5 175149507 175149653 -27935879 + MER113 DNA MER1_type? 1 156 -365 373 310 0 9 chr5 175150042 175150155 -27935377 + MER5A DNA MER1_type 1 112 -77 362 290 61 3 chr5 175150224 175150418 -27935114 - MIR SINE MIR 0 262 3 402 351 13 7 chr5 175150793 175150944 -27934588 + L3 LINE CR1 1425 1576 -1 303 209 29 9 chr5 175151000 175151105 -27934427 + GA-rich Low_complexity Low_complexity 2 108 0 23 33 0 0 chr5 175151416 175151446 -27934086 + AT_rich Low_complexity Low_complexity 1 30 0 2395 135 14 49 chr5 175151806 175152251 -27933281 + MSTB1 LTR MaLR 1 429 -3 2297 84 0 43 chr5 175152340 175152663 -27932869 - AluY SINE Alu -2 309 1 2065 121 13 3 chr5 175153006 175153313 -27932219 - AluSx SINE Alu 0 312 3 379 313 78 60 chr5 175153358 175153801 -27931731 - L1M4c LINE L1 -1047 1696 1047 304 356 14 14 chr5 175154076 175154222 -27931310 - Charlie8 DNA MER1_type -2271 146 1 264 213 12 0 chr5 175154591 175154671 -27930861 - Charlie5 DNA MER1_type -166 2446 2366 2276 103 0 3 chr5 175154732 175155032 -27930500 - AluSx SINE Alu -13 299 1 753 179 71 5 chr5 175155763 175155975 -27929557 + MER33 DNA MER1_type 23 248 -76 584 281 132 19 chr5 175156387 175156803 -27928729 + L1ME4a LINE L1 5385 5847 -274 299 334 77 42 chr5 175156817 175157422 -27928110 + L2 LINE L2 2644 3272 0 25 0 0 28 chr5 175157648 175157670 -27927862 + AT_rich Low_complexity Low_complexity 1 23 -12 2498 89 14 3 chr5 175157670 175158017 -27927515 + L1PA13 LINE L1 5813 6163 0 25 0 0 28 chr5 175158017 175158030 -27927502 + AT_rich Low_complexity Low_complexity 23 35 0 339 314 32 48 chr5 175158728 175158852 -27926680 - L2 LINE L2 -2 3270 3149 1929 142 45 3 chr5 175158940 175159229 -27926303 - AluSx SINE Alu -11 301 1 188 283 198 9 chr5 175159288 175159394 -27926138 + L2 LINE L2 3186 3311 -2 377 269 68 133 chr5 175159813 175159953 -27925579 + L3 LINE CR1 1140 1259 -318 4082 98 11 2 chr5 175159953 175160522 -27925010 + L1PA11 LINE L1 5599 6172 -2 377 269 68 133 chr5 175160522 175160630 -27924902 + L3 LINE CR1 1259 1372 -205 211 274 0 0 chr5 175161119 175161170 -27924362 + L2 LINE L2 3204 3254 -18 514 332 116 28 chr5 175161836 175162197 -27923335 - L3 LINE CR1 -12 1565 1173 24 77 0 0 chr5 175163217 175163269 -27922263 + AT_rich Low_complexity Low_complexity 1 52 0 2949 133 63 4 chr5 175163340 175163851 -27921681 + LTR1B LTR ERV1 1 541 -285 684 180 0 16 chr5 175163852 175163980 -27921552 + LTR1B LTR ERV1 701 826 0 272 360 115 47 chr5 175165338 175165616 -27919916 - L2 LINE L2 0 3272 2976 721 284 35 26 chr5 175165639 175165871 -27919661 + MIR SINE MIR 17 250 -12 285 296 122 0 chr5 175165892 175166007 -27919525 - L2 LINE L2 -317 2955 2827 201 314 152 0 chr5 175166315 175166420 -27919112 + MIR SINE MIR 4 124 -138 686 244 45 11 chr5 175166806 175166982 -27918550 + MIR SINE MIR 16 197 -65 1724 197 50 64 chr5 175166983 175167501 -27918031 + MER113 DNA MER1_type? 11 521 0 1294 168 0 10 chr5 175167863 175168071 -27917461 + LTR1B LTR ERV1 1 206 -620 278 174 22 6 chr5 175168259 175168332 -27917200 - AluJ/FLAM SINE Alu -243 59 1 786 233 156 37 chr5 175169534 175169886 -27915646 + L1ME4a LINE L1 5725 6118 -3 23 33 0 0 chr5 175169892 175169922 -27915610 + AT_rich Low_complexity Low_complexity 1 30 0 276 233 0 17 chr5 175169970 175170030 -27915502 - MIR3 SINE MIR 0 208 150 2042 110 7 0 chr5 175170037 175170313 -27915219 + AluSc SINE Alu 1 279 -25 191 61 30 0 chr5 175170313 175170346 -27915186 + (CAAAC)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr5 175170351 175170372 -27915160 + AT_rich Low_complexity Low_complexity 1 21 0 1956 143 7 7 chr5 175170437 175170731 -27914801 - AluSx SINE Alu -18 294 1 372 273 0 10 chr5 175170763 175170862 -27914670 - MLT1L LTR MaLR -4 611 514 409 333 8 0 chr5 175171120 175171246 -27914286 + MIR3 SINE MIR 79 205 -3 7445 39 8 0 chr5 175171750 175173344 -27912188 - L1PA7 LINE L1 -5 6149 4549 225 293 40 0 chr5 175173399 175173474 -27912058 + MIR3 SINE MIR 82 159 -49 2067 125 0 20 chr5 175173577 175173882 -27911650 - AluSx SINE Alu -13 299 1 2315 103 0 3 chr5 175173998 175174309 -27911223 - AluSx SINE Alu -2 310 1 1509 182 24 34 chr5 175174310 175174466 -27911066 - AluJb SINE Alu -18 294 141 2100 87 56 0 chr5 175174466 175174754 -27910778 - AluY SINE Alu -7 304 1 1509 182 24 34 chr5 175174754 175174894 -27910638 - AluJb SINE Alu -171 141 1 763 229 86 89 chr5 175174902 175175229 -27910303 + MLT1C LTR MaLR 142 467 0 2154 84 3 14 chr5 175175443 175175750 -27909782 + AluY SINE Alu 1 304 0 191 376 66 23 chr5 175175757 175176015 -27909517 + L2 LINE L2 2578 2846 -468 1074 202 5 0 chr5 175176147 175176335 -27909197 - MLT1B LTR MaLR 0 390 202 983 163 60 0 chr5 175176336 175176502 -27909030 - AluJb SINE Alu -17 295 120 2118 115 13 0 chr5 175176520 175176825 -27908707 + AluSx SINE Alu 1 309 -3 2185 89 4 4 chr5 175177146 175177426 -27908106 + AluSq SINE Alu 1 280 -33 612 209 17 6 chr5 175177429 175177601 -27907931 + GA-rich Low_complexity Low_complexity 2 175 0 607 272 103 30 chr5 175178036 175178268 -27907264 - MIR SINE MIR -1 261 13 1488 152 29 0 chr5 175178493 175178736 -27906796 - L1MB5 LINE L1 -9 6165 5916 189 294 119 24 chr5 175179435 175179473 -27906059 - MIR SINE MIR -12 250 217 2495 73 0 0 chr5 175179473 175179776 -27905756 - AluY SINE Alu -8 303 1 189 294 119 24 chr5 175179776 175179863 -27905669 - MIR SINE MIR -45 217 113 2099 114 24 7 chr5 175179959 175180257 -27905275 - AluSx SINE Alu -9 303 1 264 163 102 0 chr5 175180600 175180649 -27904883 + MIR SINE MIR 111 164 -98 1034 255 34 85 chr5 175180673 175180822 -27904710 + MLT1J LTR MaLR 22 177 -334 676 132 33 160 chr5 175180822 175180923 -27904609 - MER53 DNA DNA -3 186 74 306 0 0 0 chr5 175180923 175180957 -27904575 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 0 0 0 chr5 175180956 175180982 -27904550 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 676 132 33 160 chr5 175180957 175180984 -27904548 - MER53 DNA DNA -115 74 45 1983 91 45 0 chr5 175180984 175181248 -27904284 - AluSx SINE Alu -36 276 1 676 132 33 160 chr5 175181248 175181356 -27904176 - MER53 DNA DNA -144 45 1 1034 255 34 85 chr5 175181356 175181677 -27903855 + MLT1J LTR MaLR 177 468 -43 1840 136 0 4 chr5 175181856 175182120 -27903412 - AluJo SINE Alu -8 304 42 608 254 7 0 chr5 175182241 175182383 -27903149 + L2 LINE L2 3171 3313 0 397 164 0 0 chr5 175182806 175182879 -27902653 + L1MB2 LINE L1 6097 6169 -2 221 281 31 62 chr5 175182909 175183005 -27902527 - MIR SINE MIR -109 153 61 1478 126 9 0 chr5 175183020 175183235 -27902297 - AluJb SINE Alu -9 303 87 2210 113 3 0 chr5 175183777 175184069 -27901463 + AluSp SINE Alu 1 293 -20 312 228 139 0 chr5 175184212 175184291 -27901241 + MER117 DNA MER1_type 2 91 -106 1005 226 63 8 chr5 175184445 175184684 -27900848 + MIR SINE MIR 9 260 -2 184 279 0 16 chr5 175184689 175184750 -27900782 + L2 LINE L2 3201 3260 -12 402 229 0 31 chr5 175184809 175184905 -27900627 - MIR SINE MIR 0 262 170 778 190 117 0 chr5 175185051 175185188 -27900344 + AluJb SINE Alu 130 282 -30 497 320 11 6 chr5 175185426 175185601 -27899931 - MIR SINE MIR -3 259 84 1818 174 0 0 chr5 175186858 175187146 -27898386 - AluJb SINE Alu -10 302 15 237 282 0 28 chr5 175187213 175187284 -27898248 + L2 LINE L2 2255 2323 -991 3132 171 23 80 chr5 175187299 175187482 -27898050 + L1MB2 LINE L1 5431 5623 -548 1645 129 7 26 chr5 175187482 175187753 -27897779 + L1MA7 LINE L1 6014 6279 -12 2293 93 0 0 chr5 175187753 175188043 -27897489 - AluSc SINE Alu -19 290 1 3132 171 23 80 chr5 175188043 175188605 -27896927 + L1MB2 LINE L1 5621 6134 -37 923 125 7 29 chr5 175188628 175188764 -27896768 - FLAM_C SINE Alu 0 133 1 290 93 0 0 chr5 175188764 175188807 -27896725 + L1MB4 LINE L1 6135 6177 -3 717 332 88 32 chr5 175188829 175189042 -27896490 + L2 LINE L2 2375 2575 -697 2227 69 9 50 chr5 175189042 175189360 -27896172 - AluSq SINE Alu -8 305 1 717 332 88 32 chr5 175189360 175190000 -27895532 + L2 LINE L2 2575 3271 -1 24 53 0 0 chr5 175190608 175190646 -27894886 + AT_rich Low_complexity Low_complexity 1 38 0 266 203 14 29 chr5 175191124 175191193 -27894339 - Charlie8 DNA MER1_type -1918 499 432 3357 219 64 8 chr5 175191206 175192048 -27893484 + L1MC4 LINE L1 6854 7742 -300 345 273 0 0 chr5 175192042 175192119 -27893413 + L1MC4a LINE L1 7730 7806 -2 * 2171 115 0 3 chr5 175192121 175192417 -27893115 - AluSx SINE Alu -17 295 1 2564 116 8 6 chr5 175192680 175193034 -27892498 - THE1A LTR MaLR 0 355 1 2291 98 3 3 chr5 175193108 175193414 -27892118 - AluSc SINE Alu -3 306 1 4498 152 29 14 chr5 175193430 175193874 -27891658 + L1MB3 LINE L1 5380 5843 -340 2248 109 0 0 chr5 175193874 175194168 -27891364 + AluSx SINE Alu 1 294 -18 4498 152 29 14 chr5 175194168 175194515 -27891017 + L1MB3 LINE L1 5843 6183 0 687 251 80 40 chr5 175194519 175194718 -27890814 + MIR SINE MIR 27 233 -29 6552 67 18 42 chr5 175194718 175195565 -27889967 + LTR12 LTR ERV1 1 826 0 202 238 95 83 chr5 175195695 175195779 -27889753 - L2 LINE L2 -506 2808 2724 1177 87 0 1 chr5 175196007 175196247 -27889285 + AluSx SINE Alu 2 274 -38 204 206 0 0 chr5 175196247 175196281 -27889251 + polypurine Low_complexity Low_complexity 1 34 0 266 273 27 9 chr5 175196796 175196906 -27888626 - L1ME4a LINE L1 -2 6119 6008 805 251 71 14 chr5 175197335 175197618 -27887914 - L1MCc LINE L1 -6102 321 23 500 307 86 14 chr5 175197861 175198071 -27887461 - L1M4 LINE L1 -1605 4541 4348 571 164 78 43 chr5 175198071 175198187 -27887345 + FLAM_A SINE Alu 1 120 -13 474 18 0 0 chr5 175198190 175198245 -27887287 + (TG)n Simple_repeat Simple_repeat 1 55 0 500 307 86 14 chr5 175198245 175198518 -27887014 - L1M4 LINE L1 -1799 4347 4019 2388 203 55 9 chr5 175198573 175199119 -27886413 + MER90 LTR ERV1 5 575 0 357 252 54 9 chr5 175199390 175199501 -27886031 + LTR67 LTR ERVL 397 512 -45 448 176 66 11 chr5 175199599 175199690 -27885842 - MLT2E LTR ERVL -495 133 38 2065 223 72 32 chr5 175200106 175200604 -27884928 - MLT1H LTR MaLR -12 537 20 23 0 0 0 chr5 175200871 175200894 -27884638 + AT_rich Low_complexity Low_complexity 1 23 0 1957 153 3 0 chr5 175200958 175201258 -27884274 + AluJb SINE Alu 6 306 -6 273 305 144 8 chr5 175201430 175201548 -27883984 + L2 LINE L2 3179 3312 -1 317 273 64 29 chr5 175201596 175201768 -27883764 + L1ME3A LINE L1 5988 6165 -5 1938 114 69 77 chr5 175201854 175202232 -27883300 - THE1C LTR MaLR 0 375 1 224 286 78 0 chr5 175202332 175202409 -27883123 + MIR SINE MIR 180 262 0 478 246 36 36 chr5 175202672 175202810 -27882722 - MER5A DNA MER1_type -14 175 38 232 320 82 41 chr5 175202824 175202971 -27882561 - MIR3 SINE MIR -41 167 15 437 303 99 24 chr5 175203110 175203321 -27882211 + MIR SINE MIR 36 262 0 450 237 81 75 chr5 175203378 175203551 -27881981 + MER5A DNA MER1_type 7 180 -9 1244 282 78 23 chr5 175204764 175205295 -27880237 - L2 LINE L2 -12 3301 2742 335 282 30 38 chr5 175205296 175205313 -27880219 + MER5A DNA MER1_type 1 16 -173 414 269 42 17 chr5 175205313 175205432 -27880100 - MER5A DNA MER1_type -3 186 65 2037 116 20 7 chr5 175205590 175205884 -27879648 + AluSx SINE Alu 1 298 -14 413 229 8 66 chr5 175207017 175207139 -27878393 - L2 LINE L2 0 3272 3158 2136 113 3 0 chr5 175208073 175208384 -27877148 + AluSx SINE Alu 1 312 0 353 282 9 36 chr5 175208966 175209076 -27876456 - MER5A DNA MER1_type -43 146 40 1719 185 0 3 chr5 175209335 175209632 -27875900 + AluJo SINE Alu 12 307 -5 24 0 0 0 chr5 175210871 175210895 -27874637 + AT_rich Low_complexity Low_complexity 1 24 0 1572 193 14 24 chr5 175211661 175211956 -27873576 + AluSx SINE Alu 1 292 -20 1473 179 84 4 chr5 175212002 175212276 -27873256 + AluJb SINE Alu 1 296 -16 2283 101 0 10 chr5 175212467 175212773 -27872759 + AluSc SINE Alu 1 303 -6 2406 84 0 7 chr5 175213093 175213403 -27872129 + AluSx SINE Alu 1 308 -4 600 264 46 17 chr5 175213492 175213666 -27871866 - MIR3 SINE MIR -21 187 9 189 175 0 0 chr5 175213765 175213805 -27871727 + (CA)n Simple_repeat Simple_repeat 2 41 0 787 263 105 18 chr5 175215367 175215595 -27869937 + MIR SINE MIR 15 262 0 357 291 142 7 chr5 175215650 175215791 -27869741 - MIR SINE MIR -50 212 53 2128 66 23 20 chr5 175216218 175216521 -27869011 + AluY SINE Alu 1 304 -7 185 246 82 33 chr5 175216779 175216840 -27868692 + MIR SINE MIR 16 79 -129 21 36 0 0 chr5 175216942 175216970 -27868562 + AT_rich Low_complexity Low_complexity 1 28 0 2131 141 0 0 chr5 175217018 175217316 -27868216 + AluJb SINE Alu 1 298 -14 2128 129 3 0 chr5 175217322 175217625 -27867907 + AluSx SINE Alu 1 304 -8 2245 107 10 10 chr5 175217918 175218228 -27867304 - AluSg SINE Alu 0 310 1 2504 57 3 0 chr5 175219124 175219422 -27866110 + AluY SINE Alu 1 299 -12 1606 114 4 0 chr5 175219548 175219776 -27865756 + AluSg/x SINE Alu 79 307 -3 248 0 31 0 chr5 175219949 175219981 -27865551 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1730 149 66 30 chr5 175220967 175221329 -27864203 + THE1C LTR MaLR 1 375 0 195 257 120 91 chr5 175221750 175221925 -27863607 + L2 LINE L2 2570 2749 -565 2557 210 76 61 chr5 175222052 175222956 -27862576 + L1MC5 LINE L1 6633 7550 -411 390 201 142 12 chr5 175223020 175223189 -27862343 + L1MC5 LINE L1 7711 7901 -60 187 302 75 0 chr5 175223623 175223676 -27861856 + L2 LINE L2 3242 3298 -15 654 281 108 4 chr5 175223991 175224222 -27861310 + MIR SINE MIR 8 262 0 227 286 153 0 chr5 175224220 175224318 -27861214 + MIR SINE MIR 129 241 -21 * 711 188 0 0 chr5 175224351 175224468 -27861064 + AluJo/FLAM SINE Alu 1 117 -195 2287 95 0 26 chr5 175224469 175224774 -27860758 - AluSx SINE Alu -12 300 4 377 264 35 0 chr5 175224975 175225062 -27860470 + MIR3 SINE MIR 106 195 -13 226 273 76 0 chr5 175225149 175225215 -27860317 + L2 LINE L2 3238 3308 -5 3336 228 114 24 chr5 175225509 175226797 -27858735 + L2 LINE L2 1930 3312 -1 763 161 0 8 chr5 175226918 175227042 -27858490 + FLAM_A SINE Alu 3 125 -8 1225 136 0 0 chr5 175227051 175227220 -27858312 + AluSx SINE Alu 1 169 -143 220 319 110 11 chr5 175227231 175227322 -27858210 + MIR3 SINE MIR 55 154 -54 1455 185 46 0 chr5 175227370 175227630 -27857902 + AluJo SINE Alu 25 296 -16 306 312 21 0 chr5 175227630 175227723 -27857809 + L1MC4 LINE L1 6609 6703 -1339 301 333 0 0 chr5 175227647 175227737 -27857795 - L1MC4 LINE L1 -1339 6703 6614 * 1495 141 144 0 chr5 175227914 175228170 -27857362 + AluJo SINE Alu 11 303 -9 234 308 6 96 chr5 175228290 175228446 -27857086 - MIR3 SINE MIR 0 208 67 287 346 173 42 chr5 175228474 175228827 -27856705 - L2 LINE L2 -49 3223 2825 22 0 0 0 chr5 175228935 175228957 -27856575 + AT_rich Low_complexity Low_complexity 1 22 0 612 211 15 15 chr5 175229071 175229204 -27856328 + FLAM_C SINE Alu 11 143 0 317 321 75 25 chr5 175229212 175229371 -27856161 - MIR SINE MIR -89 173 7 498 267 75 0 chr5 175229527 175229673 -27855859 + MIR SINE MIR 73 229 -33 260 269 39 0 chr5 175229899 175229977 -27855555 + L2 LINE L2 3169 3249 -23 195 248 171 29 chr5 175230487 175230592 -27854940 + MIR SINE MIR 89 208 -54 1743 154 14 3 chr5 175230594 175230879 -27854653 - AluJb SINE Alu -13 299 12 336 312 156 19 chr5 175230978 175231183 -27854349 - MIR SINE MIR -11 251 19 593 139 20 0 chr5 175231528 175231629 -27853903 - AluJb SINE Alu -8 304 202 4432 43 7 11 chr5 175231634 175232194 -27853338 + LTR6B LTR ERV1 1 558 0 1029 86 0 0 chr5 175232226 175232365 -27853167 - AluSg/x SINE Alu -3 307 169 209 238 48 60 chr5 175232375 175232388 -27853144 + L2 LINE L2 3174 3186 -86 2086 75 6 60 chr5 175232388 175232706 -27852826 - AluSg SINE Alu -9 301 1 209 238 48 60 chr5 175232706 175232776 -27852756 + L2 LINE L2 3186 3256 -16 187 205 77 64 chr5 175233408 175233486 -27852046 - MIR3 SINE MIR -54 154 76 213 213 64 0 chr5 175233712 175233759 -27851773 + MIR3 SINE MIR 126 175 -33 260 263 228 0 chr5 175233876 175233990 -27851542 - MIR SINE MIR -64 144 26 775 198 38 0 chr5 175234483 175234640 -27850892 + MER58A DNA MER1_type 45 207 -17 1790 63 0 5 chr5 175234863 175235086 -27850446 - AluY SINE Alu -89 222 1 773 305 176 41 chr5 175235899 175236609 -27848923 - L2 LINE L2 -1431 1883 1019 2190 98 3 14 chr5 175236609 175236744 -27848788 + AluSx SINE Alu 1 136 -176 2104 112 34 0 chr5 175236744 175237038 -27848494 + AluSp SINE Alu 1 304 -9 2190 98 3 14 chr5 175237038 175237197 -27848335 + AluSx SINE Alu 136 292 -20 773 305 176 41 chr5 175237197 175237406 -27848126 - L2 LINE L2 -2295 1019 840 24 0 0 0 chr5 175237520 175237544 -27847988 + AT_rich Low_complexity Low_complexity 1 24 0 465 270 153 25 chr5 175237585 175237944 -27847588 + L1ME2 LINE L1 5543 5947 -217 1701 148 11 19 chr5 175238356 175238626 -27846906 + AluJb SINE Alu 1 268 -44 2293 74 34 0 chr5 175239191 175239488 -27846044 - AluSp SINE Alu -6 307 1 1530 169 138 11 chr5 175240389 175240767 -27844765 - L1MB3 LINE L1 -1 6182 5757 1728 158 38 37 chr5 175240784 175241255 -27844277 - LTR10A LTR ERV1 -62 547 13 357 150 30 0 chr5 175241259 175241333 -27844199 - L1MB3 LINE L1 -430 5753 5687 585 335 0 12 chr5 175241585 175241758 -27843774 + MER5B DNA MER1_type 2 172 -6 2446 55 0 3 chr5 175241987 175242279 -27843253 - AluY SINE Alu -20 291 1 473 299 49 24 chr5 175242873 175243037 -27842495 + MIR SINE MIR 3 170 -92 1855 172 7 3 chr5 175243215 175243511 -27842021 - AluJo SINE Alu -15 297 1 600 103 0 103 chr5 175244123 175244156 -27841376 - MER30B DNA MER1_type -85 105 70 2179 99 0 20 chr5 175244156 175244458 -27841074 - AluY SINE Alu -15 296 1 600 103 0 103 chr5 175244458 175244541 -27840991 - MER30B DNA MER1_type -120 70 1 256 261 193 11 chr5 175244858 175244946 -27840586 + MIR3 SINE MIR 15 118 -90 233 347 32 0 chr5 175245554 175245678 -27839854 + L1ME LINE L1 5696 5823 -298 2466 35 0 0 chr5 175246196 175246514 -27839018 - AluY SINE Alu 0 318 1 280 85 21 0 chr5 175246768 175246815 -27838717 - MER30B DNA MER1_type -182 48 1 284 268 33 48 chr5 175246816 175246993 -27838539 - L1MC4 LINE L1 -432 7610 7337 1085 179 49 49 chr5 175246993 175247317 -27838215 + MER33 DNA MER1_type 1 324 0 284 268 33 48 chr5 175247317 175247339 -27838193 - L1MC4 LINE L1 -705 7337 7316 689 201 82 0 chr5 175247344 175247503 -27838029 - MER3 DNA MER1_type 0 209 38 1116 212 100 0 chr5 175247517 175247776 -27837756 + MER58B DNA MER1_type 57 341 0 2134 105 14 14 chr5 175247830 175248124 -27837408 - AluSp SINE Alu -19 294 1 2282 95 10 0 chr5 175248226 175248521 -27837011 + AluY SINE Alu 1 298 -13 2217 82 41 0 chr5 175248764 175249057 -27836475 + AluY SINE Alu 1 305 -6 30 59 0 0 chr5 175249578 175249629 -27835903 + AT_rich Low_complexity Low_complexity 1 51 0 311 250 96 0 chr5 175251701 175251805 -27833727 - L1MC4 LINE L1 -9 8033 7920 1709 133 0 12 chr5 175251875 175252131 -27833401 - AluSx SINE Alu -18 294 42 1867 138 18 7 chr5 175252152 175252457 -27833075 - AluSx SINE Alu 0 308 1 293 308 135 17 chr5 175252639 175252876 -27832656 - L2 LINE L2 -1019 2295 2031 22 35 0 0 chr5 175253780 175253809 -27831723 + AT_rich Low_complexity Low_complexity 1 29 0 1558 192 13 32 chr5 175254424 175254732 -27830800 + AluJo SINE Alu 1 302 -10 877 149 15 0 chr5 175255031 175255165 -27830367 + AluJo SINE Alu 1 136 -176 594 289 72 8 chr5 175255187 175255450 -27830082 - L1ME LINE L1 -321 5800 5521 533 277 31 67 chr5 175255494 175255689 -27829843 - MIR SINE MIR -72 190 3 395 224 51 45 chr5 175256223 175256379 -27829153 - L1MC4 LINE L1 0 8042 7886 369 224 0 0 chr5 175256474 175256541 -27828991 + AluJ/FLAM SINE Alu 1 67 -235 817 179 29 23 chr5 175256541 175256714 -27828818 + AluJo/FRAM SINE Alu 133 306 -6 418 179 0 37 chr5 175256730 175256880 -27828652 - L1MC4 LINE L1 -169 7782 7507 2280 99 3 0 chr5 175256897 175257191 -27828341 + AluSx SINE Alu 1 295 -17 906 221 0 0 chr5 175257202 175257365 -27828167 - FRAM SINE Alu -15 161 1 1710 178 36 7 chr5 175257371 175257674 -27827858 - AluJb SINE Alu 0 312 1 396 265 15 8 chr5 175257699 175257831 -27827701 - L1MC4 LINE L1 -473 7569 7437 955 44 0 96 chr5 175257921 175258056 -27827476 + AluSp/q SINE Alu 172 293 -20 271 316 118 41 chr5 175258815 175259204 -27826328 + L1MEd LINE L1 307 725 -5394 590 181 7 81 chr5 175259633 175259693 -27825839 + L1MC4 LINE L1 6725 6788 -1254 1941 148 10 7 chr5 175259693 175259984 -27825548 - AluSx SINE Alu -20 292 1 590 181 7 81 chr5 175259984 175260072 -27825460 + L1MC4 LINE L1 6788 6862 -1180 1052 69 14 24 chr5 175260214 175260642 -27824890 + (TA)n Simple_repeat Simple_repeat 1 423 0 1524 132 0 11 chr5 175260645 175260951 -27824581 + L1PB1 LINE L1 5801 6148 -3 2755 182 4 60 chr5 175261000 175261590 -27823942 + L1 LINE L1 3440 4061 -2085 2203 118 3 0 chr5 175261590 175261896 -27823636 + AluSx SINE Alu 3 309 -3 2474 68 3 0 chr5 175261903 175262213 -27823319 + AluY SINE Alu 1 311 0 2755 182 4 60 chr5 175262213 175262333 -27823199 + L1 LINE L1 4067 4118 -2028 * 6050 206 42 18 chr5 175262316 175262748 -27822784 - L1 LINE L1 -3814 2514 2094 2210 125 0 0 chr5 175262748 175263052 -27822480 + AluSx SINE Alu 1 304 -8 6050 206 42 18 chr5 175263052 175265055 -27820477 - L1 LINE L1 -4234 2094 3 2339 243 62 61 chr5 175265070 175265793 -27819739 - L1M3d LINE L1 -5010 881 633 2235 104 16 3 chr5 175265793 175266100 -27819432 + AluSx SINE Alu 2 312 0 2339 243 62 61 chr5 175266100 175266725 -27818807 - L1M3d LINE L1 -5258 633 10 303 335 26 52 chr5 175266749 175267018 -27818514 - L2 LINE L2 -5 3308 3047 271 264 33 25 chr5 175267018 175267139 -27818393 + L1MC1 LINE L1 5873 5994 -339 * 1091 191 73 8 chr5 175267051 175267297 -27818235 + L1MB8 LINE L1 5907 6168 -10 315 324 121 0 chr5 175267607 175267780 -27817752 - L2 LINE L2 -339 2975 2782 593 103 0 0 chr5 175267845 175267923 -27817609 + MADE1 DNA Mariner 1 78 -2 205 276 152 19 chr5 175267999 175268104 -27817428 - MIR SINE MIR -70 192 74 596 321 106 30 chr5 175268194 175268533 -27816999 - MLT1H LTR MaLR 0 549 185 1283 165 0 0 chr5 175268533 175268727 -27816805 + AluJo SINE Alu 1 194 -118 295 234 78 0 chr5 175268768 175268845 -27816687 - MLT1H LTR MaLR -350 199 117 2044 192 83 2 chr5 175269167 175269588 -27815944 - MLT1C LTR MaLR -7 460 6 267 31 0 0 chr5 175269805 175269837 -27815695 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 1347 314 51 6 chr5 175270500 175270968 -27814564 + LTR67 LTR ERVL 69 557 0 2570 198 9 14 chr5 175271854 175272362 -27813170 + L1ME3 LINE L1 5320 5826 -338 7101 114 48 48 chr5 175272362 175273641 -27811891 + MER52C LTR ERV1 1 1278 0 2570 198 9 14 chr5 175273641 175273687 -27811845 + L1ME3 LINE L1 5826 5871 -293 1973 199 41 5 chr5 175273731 175274148 -27811384 + L1ME4a LINE L1 3777 4208 -1938 2166 129 0 3 chr5 175274151 175274454 -27811078 + AluSx SINE Alu 1 302 -10 189 107 0 0 chr5 175275579 175275607 -27809925 + (CACCAT)n Simple_repeat Simple_repeat 4 31 0 4297 205 15 19 chr5 175279000 175280267 -27805265 + L1ME4a LINE L1 4252 5511 -743 1275 151 64 0 chr5 175280267 175280479 -27805053 + L1MC1 LINE L1 6101 6333 0 817 231 33 73 chr5 175280488 175280791 -27804741 + L1ME3 LINE L1 5871 6161 -1 195 139 23 23 chr5 175280912 175280955 -27804577 + L3b LINE CR1 1530 1572 -11 1816 143 3 55 chr5 175281298 175281627 -27803905 - AluJb SINE Alu 0 312 1 277 115 16 16 chr5 175281918 175281979 -27803553 + (GA)n Simple_repeat Simple_repeat 2 62 0 603 263 122 18 chr5 175282312 175282647 -27802885 + L1ME4a LINE L1 5647 6016 -105 2086 252 69 4 chr5 175283488 175283996 -27801536 + Zaphod DNA AcHobo 2 542 -3489 1017 66 0 0 chr5 175284136 175284257 -27801275 + AluSp SINE Alu 14 134 -179 241 133 50 0 chr5 175284757 175284817 -27800715 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 247 231 0 0 chr5 175285561 175285613 -27799919 + L2 LINE L2 3262 3313 0 4102 52 36 39 chr5 175285621 175285813 -27799719 + L1PA7 LINE L1 5597 5788 -366 2349 104 0 9 chr5 175285813 175286129 -27799403 + AluSp SINE Alu 1 313 0 4102 52 36 39 chr5 175286129 175286496 -27799036 + L1PA7 LINE L1 5788 6154 0 422 238 117 42 chr5 175287331 175287545 -27797987 + L2 LINE L2 2920 3149 -164 2317 199 187 28 chr5 175287616 175288424 -27797108 + LTR28 LTR ERV1 2 1020 0 344 286 12 0 chr5 175288425 175288509 -27797023 + L2 LINE L2 3214 3298 -15 562 231 8 8 chr5 175288579 175288709 -27796823 - MIR SINE MIR -63 145 16 281 325 26 13 chr5 175288777 175288928 -27796604 - L2 LINE L2 0 3313 3161 709 204 0 20 chr5 175288959 175289106 -27796426 + MLT1B LTR MaLR 1 144 -246 * 1263 195 116 7 chr5 175289105 175289208 -27796324 + MLT1B LTR MaLR 67 157 -233 1438 185 26 46 chr5 175289208 175289324 -27796208 + AluJo SINE Alu 1 118 -194 2416 99 0 0 chr5 175289324 175289627 -27795905 - AluSx SINE Alu -9 303 1 1438 185 26 46 chr5 175289627 175289812 -27795720 + AluJo SINE Alu 118 296 -16 1263 195 116 7 chr5 175289812 175290000 -27795532 + MLT1B LTR MaLR 157 390 0 2176 80 3 17 chr5 175290398 175290706 -27794826 - AluY SINE Alu 0 304 1 790 232 83 86 chr5 175290920 175291256 -27794276 - MLT1C LTR MaLR 0 467 133 1485 182 27 34 chr5 175291256 175291395 -27794137 + AluJb SINE Alu 1 139 -173 2235 79 48 0 chr5 175291395 175291685 -27793847 + AluY SINE Alu 1 304 -7 1485 182 27 34 chr5 175291685 175291841 -27793691 + AluJb SINE Alu 139 294 -18 2331 103 0 3 chr5 175291842 175292153 -27793379 + AluSx SINE Alu 1 310 -2 2088 125 0 20 chr5 175292270 175292575 -27792957 + AluSx SINE Alu 1 299 -13 201 293 40 0 chr5 175292678 175292753 -27792779 - MIR3 SINE MIR -49 159 82 7107 39 16 9 chr5 175292808 175294402 -27791130 + L1PA7 LINE L1 4549 6149 -5 376 333 8 0 chr5 175294904 175295030 -27790502 - MIR3 SINE MIR -3 205 79 367 273 0 10 chr5 175295288 175295387 -27790145 + MLT1L LTR MaLR 514 611 -4 1973 143 7 7 chr5 175295419 175295713 -27789819 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr5 175295778 175295799 -27789733 + AT_rich Low_complexity Low_complexity 1 21 0 191 61 30 0 chr5 175295804 175295837 -27789695 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 2127 105 0 3 chr5 175295837 175296116 -27789416 - AluSc SINE Alu -31 278 1 258 233 0 17 chr5 175296123 175296183 -27789349 + MIR3 SINE MIR 150 208 0 23 33 0 0 chr5 175296231 175296261 -27789271 + AT_rich Low_complexity Low_complexity 1 30 0 773 232 153 37 chr5 175296267 175296620 -27788912 - L1ME4a LINE L1 -3 6118 5725 2121 132 0 3 chr5 175297840 175298150 -27787382 + AluSx SINE Alu 1 309 -3 2136 90 4 7 chr5 175298471 175298750 -27786782 + AluSq SINE Alu 1 278 -35 192 167 0 0 chr5 175298755 175298803 -27786729 + GA-rich Low_complexity Low_complexity 2 49 0 242 256 244 0 chr5 175348940 175349018 -27736514 - MER5A DNA MER1_type -83 106 10 29 28 0 0 chr5 175349180 175349216 -27736316 + AT_rich Low_complexity Low_complexity 1 36 0 1053 87 214 41 chr5 175349281 175349386 -27736146 + MER30 DNA MER1_type 1 86 -144 324 0 0 0 chr5 175349386 175349422 -27736110 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 1053 87 214 41 chr5 175349422 175349512 -27736020 + MER30 DNA MER1_type 86 230 0 667 183 34 29 chr5 175349582 175349757 -27735775 - L1MA5 LINE L1 -2 6298 6123 2536 225 89 23 chr5 175350077 175351383 -27734149 - LTR10B-int LTR ERV1 -5549 1218 5 1357 177 68 19 chr5 175351384 175351649 -27733883 - LTR10B LTR ERV1 -1 546 269 2337 82 23 0 chr5 175351711 175352015 -27733517 - AluY SINE Alu 0 311 1 2971 258 63 41 chr5 175352015 175352996 -27732536 - BaEV-int LTR ERV1 -3184 3465 2685 * 3338 250 60 13 chr5 175352984 175353849 -27731683 - BaEV-int LTR ERV1 -4910 1739 834 22 0 0 0 chr5 175354021 175354043 -27731489 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 175354675 175354704 -27730828 + AT_rich Low_complexity Low_complexity 1 29 0 518 174 33 33 chr5 175354751 175354843 -27730689 + FLAM_A SINE Alu 37 128 -14 829 215 0 12 chr5 175356406 175356569 -27728963 + FAM SINE Alu 12 172 -13 1837 151 3 43 chr5 175356569 175356894 -27728638 + AluJb SINE Alu 1 312 0 1279 165 0 24 chr5 175357430 175357636 -27727896 - AluJo SINE Alu -111 201 1 1152 291 147 23 chr5 175357669 175358316 -27727216 - L1MEc LINE L1 -5634 762 36 3102 189 104 35 chr5 175358419 175359188 -27726344 - Charlie1a DNA MER1_type -633 822 1 2014 97 47 7 chr5 175360486 175360786 -27724746 + AluSx SINE Alu 1 312 0 1455 167 17 0 chr5 175360957 175361197 -27724335 + AluSx SINE Alu 56 299 -13 815 166 96 0 chr5 175362797 175362954 -27722578 - AluSc SINE Alu -11 298 127 832 120 56 0 chr5 175363338 175363463 -27722069 - FLAM_C SINE Alu 0 133 2 1214 168 17 99 chr5 175363527 175363574 -27721958 + L1ME1 LINE L1 5549 5598 -566 2151 119 0 19 chr5 175363574 175363756 -27721776 - AluSq SINE Alu 0 313 138 2189 99 0 7 chr5 175363756 175364059 -27721473 - AluSg SINE Alu -9 301 1 2151 119 0 19 chr5 175364059 175364195 -27721337 - AluSq SINE Alu -175 138 1 1214 168 17 99 chr5 175364195 175364439 -27721093 + L1ME1 LINE L1 5598 5819 -345 1795 169 0 0 chr5 175364439 175364747 -27720785 + AluSx SINE Alu 1 308 -4 1244 103 0 0 chr5 175364773 175364948 -27720584 + AluY SINE Alu 133 307 -4 886 221 120 5 chr5 175364949 175365206 -27720326 + L1ME1 LINE L1 5844 6134 -28 1285 122 150 63 chr5 175365227 175365514 -27720018 - AluSx SINE Alu 0 312 1 2183 116 0 0 chr5 175365558 175365868 -27719664 - AluSg SINE Alu 0 310 1 831 152 8 0 chr5 175367490 175367622 -27717910 + FLAM_C SINE Alu 1 133 0 1913 132 28 0 chr5 175367633 175367921 -27717611 + AluSx SINE Alu 3 298 -14 1495 147 61 38 chr5 175367925 175368218 -27717314 + AluJo SINE Alu 3 302 0 324 114 143 29 chr5 175368259 175368329 -27717203 + MER4D LTR ERV1 723 800 -72 31 0 0 0 chr5 175368334 175368365 -27717167 + AT_rich Low_complexity Low_complexity 1 31 0 4088 165 87 26 chr5 175368385 175369205 -27716327 + L1MB2 LINE L1 5301 6170 -1 2126 63 0 63 chr5 175369511 175369841 -27715691 + AluY SINE Alu 1 311 0 24 32 0 0 chr5 175370918 175370949 -27714583 + AT_rich Low_complexity Low_complexity 1 31 0 575 196 10 0 chr5 175372057 175372154 -27713378 + AluJ/FLAM SINE Alu 3 100 -212 593 207 9 0 chr5 175372224 175372340 -27713192 + FLAM_A SINE Alu 1 117 -25 1271 107 0 0 chr5 175372373 175372542 -27712990 + AluSx SINE Alu 1 169 -143 1444 189 25 29 chr5 175372542 175372822 -27712710 - LTR10B LTR ERV1 0 547 269 311 232 122 0 chr5 175372883 175372965 -27712567 - LTR10B LTR ERV1 -262 285 194 12627 273 40 36 chr5 175373055 175374458 -27711074 - LTR10B-int LTR ERV1 -1 7784 6387 2146 105 13 0 chr5 175374458 175374763 -27710769 - AluSc SINE Alu 0 309 1 12627 273 40 36 chr5 175374763 175376622 -27708910 - LTR10B-int LTR ERV1 -1398 6387 4502 2391 70 3 0 chr5 175376622 175376923 -27708609 - AluY SINE Alu -9 302 1 12627 273 40 36 chr5 175376923 175377904 -27707628 - LTR10B-int LTR ERV1 -3283 4502 3526 3407 232 76 18 chr5 175377892 175379814 -27705718 - LTR10B-int LTR ERV1 -4910 1739 5 * 1360 151 75 26 chr5 175379815 175380080 -27705452 - LTR10B LTR ERV1 -1 546 269 2255 85 20 0 chr5 175380142 175380447 -27705085 - AluY SINE Alu 0 311 1 334 195 122 0 chr5 175380474 175380556 -27704976 - LTR10B LTR ERV1 -262 285 194 1162 68 0 0 chr5 175380642 175380789 -27704743 + AluSg/x SINE Alu 166 312 0 1258 158 154 8 chr5 175380802 175381042 -27704490 + AluSx SINE Alu 7 281 -31 1919 138 0 3 chr5 175383476 175383773 -27701759 + AluSx SINE Alu 1 296 -16 2111 112 0 3 chr5 175383860 175384156 -27701376 + AluSg1 SINE Alu 1 295 -14 1703 101 4 0 chr5 175384170 175384398 -27701134 - AluSx SINE Alu -83 229 1 292 212 179 70 chr5 175384542 175384704 -27700828 + MIR SINE MIR 16 212 -50 732 218 122 10 chr5 175384704 175384901 -27700631 - MER20 DNA MER1_type 0 219 1 292 212 179 70 chr5 175384901 175384929 -27700603 + MIR SINE MIR 212 236 -26 21 0 0 0 chr5 175385200 175385221 -27700311 + AT_rich Low_complexity Low_complexity 1 21 0 1065 68 0 0 chr5 175385487 175385620 -27699912 + AluSq/x SINE Alu 1 133 -179 2070 109 0 0 chr5 175385624 175385941 -27699591 + AluSx SINE Alu 1 317 0 2258 102 0 3 chr5 175387108 175387413 -27698119 - AluSx SINE Alu -8 304 1 22 0 0 0 chr5 175388277 175388299 -27697233 + AT_rich Low_complexity Low_complexity 1 22 0 1278 170 38 126 chr5 175388308 175388626 -27696906 + AluJo SINE Alu 3 292 -10 1971 115 6 34 chr5 175388632 175388767 -27696765 + AluSx SINE Alu 1 138 -174 2209 99 0 10 chr5 175388767 175389079 -27696453 + AluSc SINE Alu 1 309 0 1971 115 6 34 chr5 175389079 175389264 -27696268 + AluSx SINE Alu 138 312 0 2256 93 3 0 chr5 175389271 175389581 -27695951 + AluSp SINE Alu 1 311 -2 1998 120 10 16 chr5 175390122 175390431 -27695101 + AluSg1 SINE Alu 1 307 -2 2231 88 0 7 chr5 175390457 175390754 -27694778 + AluSg SINE Alu 5 299 -11 22 56 0 0 chr5 175390853 175390889 -27694643 + AT_rich Low_complexity Low_complexity 1 36 0 1966 128 3 26 chr5 175391761 175392067 -27693465 - AluSx SINE Alu -13 299 1 370 191 16 0 chr5 175392287 175392350 -27693182 + AluS SINE Alu 3 66 -237 935 192 0 0 chr5 175392356 175392523 -27693009 + AluJb SINE Alu 129 295 -17 1028 151 24 0 chr5 175392648 175392814 -27692718 + L1M3 LINE L1 5634 5803 -368 2175 129 39 11 chr5 175392818 175393182 -27692350 - L1M4 LINE L1 -540 5644 5271 1615 144 48 20 chr5 175393626 175393918 -27691614 - AluJb SINE Alu -12 300 1 2421 41 7 0 chr5 175394216 175394511 -27691021 - AluY SINE Alu -14 297 1 619 223 84 133 chr5 175394530 175394862 -27690670 - MER102b DNA MER1_type 0 341 26 976 179 6 0 chr5 175395096 175395258 -27690274 + FAM SINE Alu 1 163 -12 270 81 0 0 chr5 175395639 175395676 -27689856 + (CA)n Simple_repeat Simple_repeat 2 38 0 1678 120 4 0 chr5 175396208 175396449 -27689083 - AluSg SINE Alu -18 292 51 2186 95 0 0 chr5 175396692 175396997 -27688535 + AluY SINE Alu 1 305 -6 1680 137 3 21 chr5 175398090 175398375 -27687157 + AluJb SINE Alu 9 288 -24 207 0 0 0 chr5 175398375 175398398 -27687134 + (CAT)n Simple_repeat Simple_repeat 2 24 0 677 301 40 13 chr5 175399514 175399740 -27685792 + MIR SINE MIR 4 235 -27 192 163 0 0 chr5 175399945 175399988 -27685544 + (GCTG)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr5 175400478 175400513 -27685019 + GC_rich Low_complexity Low_complexity 1 35 0 231 280 104 16 chr5 175401567 175401692 -27683840 + MIR SINE MIR 115 250 -12 2098 88 0 16 chr5 175401731 175402036 -27683496 + AluSx SINE Alu 1 300 -12 2404 51 0 10 chr5 175402113 175402424 -27683108 - AluY SINE Alu -3 308 1 2217 75 0 13 chr5 175402715 175403020 -27682512 - AluY SINE Alu -10 301 1 557 202 0 70 chr5 175403201 175403330 -27682202 - FLAM_A SINE Alu -13 120 1 1612 172 4 4 chr5 175404140 175404419 -27681113 - AluJo SINE Alu -33 279 1 760 188 8 0 chr5 175404430 175404558 -27680974 - FLAM_A SINE Alu -4 129 1 262 221 65 0 chr5 175404560 175404637 -27680895 + L1MC4a LINE L1 5853 5934 -1874 414 305 53 0 chr5 175406480 175406611 -27678921 - L2 LINE L2 -2 3311 3174 2226 106 0 0 chr5 175406716 175407019 -27678513 - AluSx SINE Alu -9 303 1 2310 89 0 0 chr5 175407029 175407332 -27678200 - AluSx SINE Alu -9 303 1 278 263 61 35 chr5 175407651 175407765 -27677767 + MIR3 SINE MIR 61 177 -31 2369 65 0 0 chr5 175407878 175408169 -27677363 + AluY SINE Alu 1 291 -20 2298 95 0 9 chr5 175408226 175408541 -27676991 + AluSq SINE Alu 1 312 -1 648 148 78 9 chr5 175408761 175408876 -27676656 + FLAM_C SINE Alu 2 124 -19 1982 101 0 12 chr5 175408977 175409234 -27676298 - AluSx SINE Alu -58 254 1 22 80 0 0 chr5 175409245 175409295 -27676237 + AT_rich Low_complexity Low_complexity 1 50 0 1722 188 3 10 chr5 175409273 175409582 -27675950 - AluJo SINE Alu -5 307 1 781 188 8 0 chr5 175409593 175409721 -27675811 - FLAM_A SINE Alu -4 129 1 249 221 65 0 chr5 175409723 175409800 -27675732 + L1MC4a LINE L1 5853 5934 -1874 417 305 53 0 chr5 175411643 175411774 -27673758 - L2 LINE L2 -2 3311 3174 2348 97 0 10 chr5 175411874 175412183 -27673349 - AluSg SINE Alu -4 306 1 189 343 65 28 chr5 175412467 175412575 -27672957 - MIR SINE MIR -149 113 2 533 236 79 45 chr5 175412912 175413090 -27672442 - MIR SINE MIR -47 215 32 461 239 106 9 chr5 175413770 175413883 -27671649 - MIR3 SINE MIR -52 156 33 265 317 48 28 chr5 175414508 175414653 -27670879 - MIR SINE MIR -35 227 80 244 195 132 26 chr5 175414745 175414836 -27670696 + MIR3 SINE MIR 70 168 -40 950 304 104 24 chr5 175414920 175415335 -27670197 - L2 LINE L2 0 3313 2866 2506 74 0 0 chr5 175415648 175415944 -27669588 + AluSg SINE Alu 3 298 -12 396 235 68 140 chr5 175416159 175416321 -27669211 + L1MC4a LINE L1 6414 6586 -1222 2431 89 0 3 chr5 175416321 175416624 -27668908 - AluSg SINE Alu -8 302 1 847 172 0 0 chr5 175416628 175416756 -27668776 - FLAM_C SINE Alu -5 128 1 396 235 68 140 chr5 175416756 175416852 -27668680 + L1MC4a LINE L1 6589 6658 -1150 5920 90 71 19 chr5 175416865 175417743 -27667789 + Charlie3 DNA MER1_type 1 923 -1787 2231 101 6 31 chr5 175417845 175418163 -27667369 - AluSq SINE Alu -3 310 1 527 150 0 0 chr5 175418164 175418244 -27667288 + FLAM SINE Alu 51 130 -13 305 307 9 9 chr5 175418247 175418361 -27667171 - L1MC4a LINE L1 -1935 5873 5760 1583 113 67 125 chr5 175418663 175418991 -27666541 - AluSx SINE Alu -3 309 1 2445 57 3 17 chr5 175419009 175419308 -27666224 + AluSc SINE Alu 1 295 -14 1629 182 10 14 chr5 175419308 175419599 -27665933 - AluJo SINE Alu -22 290 1 686 166 0 119 chr5 175419796 175419947 -27665585 - FLAM_C SINE Alu 0 133 1 2266 122 0 0 chr5 175420187 175420490 -27665042 - AluSx SINE Alu -9 303 1 2294 112 3 0 chr5 175420542 175420847 -27664685 - AluSx SINE Alu -6 306 1 2455 97 0 0 chr5 175420850 175421160 -27664372 - AluSx SINE Alu -2 310 1 281 263 61 35 chr5 175421479 175421593 -27663939 + MIR3 SINE MIR 61 177 -31 2509 65 0 0 chr5 175421706 175421997 -27663535 + AluY SINE Alu 1 291 -20 2453 95 0 9 chr5 175422054 175422369 -27663163 + AluSq SINE Alu 1 312 -1 1653 185 30 7 chr5 175422588 175422885 -27662647 + AluJo SINE Alu 1 304 -8 840 152 23 0 chr5 175422950 175423082 -27662450 + AluJb SINE Alu 169 303 -9 960 118 0 15 chr5 175423160 175423295 -27662237 + FLAM_C SINE Alu 1 133 0 247 247 200 0 chr5 175423425 175423510 -27662022 + L2 LINE L2 3169 3270 -2 270 0 0 0 chr5 175423545 175423575 -27661957 + (CA)n Simple_repeat Simple_repeat 2 31 0 329 316 0 73 chr5 175423713 175423743 -27661789 + MIR3 SINE MIR 58 89 -119 2334 77 0 58 chr5 175423743 175424055 -27661477 + AluSc SINE Alu 1 294 -15 329 316 0 73 chr5 175424055 175424160 -27661372 + MIR3 SINE MIR 89 183 -25 634 203 127 44 chr5 175424212 175424370 -27661162 - AluJo SINE Alu -139 173 3 1345 132 184 49 chr5 175425443 175425615 -27659917 - AluJo SINE Alu 0 302 155 2258 119 3 0 chr5 175425615 175425908 -27659624 - AluSx SINE Alu -18 294 1 1345 132 184 49 chr5 175425908 175426001 -27659531 - AluJo SINE Alu -147 155 1 262 303 40 0 chr5 175426411 175426487 -27659045 + L2 LINE L2 3194 3272 0 683 136 7 107 chr5 175426874 175427014 -27658518 + AluJo/FLAM SINE Alu 2 127 -175 2423 89 0 29 chr5 175427015 175427331 -27658201 + AluSg SINE Alu 1 307 -3 2163 100 0 28 chr5 175427341 175427669 -27657863 + AluSg SINE Alu 1 320 0 2225 106 7 7 chr5 175427807 175428108 -27657424 + AluSx SINE Alu 1 301 -11 299 303 137 29 chr5 175428806 175428981 -27656551 - L3b LINE CR1 -189 1394 1201 1885 154 0 69 chr5 175428994 175429312 -27656220 + AluJb SINE Alu 1 296 -16 851 136 0 57 chr5 175429322 175429462 -27656070 + FLAM_A SINE Alu 1 132 -1 337 210 0 0 chr5 175429463 175429525 -27656007 + AluJ/FLAM SINE Alu 14 75 -227 31 0 0 0 chr5 175429571 175429602 -27655930 + AT_rich Low_complexity Low_complexity 1 31 0 414 271 90 19 chr5 175429732 175429887 -27655645 + MIR3 SINE MIR 38 203 -5 226 261 97 8 chr5 175429892 175430026 -27655506 + MER117 DNA MER1_type 2 147 -50 23 0 0 0 chr5 175430071 175430094 -27655438 + AT_rich Low_complexity Low_complexity 1 23 0 1844 176 6 16 chr5 175430171 175430484 -27655048 - AluJb SINE Alu -2 310 1 2228 126 0 3 chr5 175430493 175430802 -27654730 - AluSx SINE Alu -4 308 1 2262 60 4 0 chr5 175430978 175431245 -27654287 + AluY SINE Alu 31 298 -13 377 117 4 0 chr5 175431334 175431393 -27654139 + FLAM_A SINE Alu 71 123 -10 580 178 0 0 chr5 175432425 175432515 -27653017 + AluJ/FLAM SINE Alu 10 99 -213 285 51 0 0 chr5 175432534 175432573 -27652959 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1950 126 6 74 chr5 175432870 175433196 -27652336 + AluSx SINE Alu 1 304 -8 2006 137 16 22 chr5 175433647 175433961 -27651571 + AluSx SINE Alu 1 312 0 2483 66 0 3 chr5 175433964 175434268 -27651264 + AluY SINE Alu 1 303 -8 610 187 137 14 chr5 175434420 175434559 -27650973 - MER5B DNA MER1_type -7 171 16 280 308 19 56 chr5 175435514 175435621 -27649911 + L2 LINE L2 3160 3262 -10 223 120 80 13 chr5 175435749 175435824 -27649708 + (TA)n Simple_repeat Simple_repeat 1 80 0 2176 109 10 10 chr5 175435877 175436179 -27649353 + AluSg SINE Alu 1 302 -8 2169 129 0 26 chr5 175436191 175436500 -27649032 + AluSx SINE Alu 1 301 -11 2197 104 3 3 chr5 175436519 175436806 -27648726 + AluSx SINE Alu 12 298 -14 498 253 165 36 chr5 175437317 175437344 -27648188 - L1ME4a LINE L1 -2 6119 6097 2359 68 41 0 chr5 175437344 175437638 -27647894 + AluY SINE Alu 1 306 -5 498 253 165 36 chr5 175437638 175437998 -27647534 - L1ME4a LINE L1 -24 6097 5682 242 156 22 0 chr5 175438070 175438115 -27647417 - L1ME4a LINE L1 -536 5585 5540 1014 190 0 6 chr5 175438229 175438408 -27647124 + AluJb SINE Alu 135 312 0 279 282 48 78 chr5 175439180 175439283 -27646249 - MIR SINE MIR -86 122 23 342 265 68 17 chr5 175440279 175440396 -27645136 - MIR SINE MIR -131 131 9 815 262 143 76 chr5 175440497 175440654 -27644878 + L2 LINE L2 1232 1377 -1937 1991 117 96 0 chr5 175440654 175440935 -27644597 + AluSx SINE Alu 3 310 -2 815 262 143 76 chr5 175440935 175440948 -27644584 + L2 LINE L2 1377 1388 -1926 1863 170 0 13 chr5 175440948 175441254 -27644278 + AluJo SINE Alu 5 306 -6 815 262 143 76 chr5 175441254 175441517 -27644015 + L2 LINE L2 1388 1695 -1619 266 0 29 0 chr5 175441519 175441553 -27643979 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 763 244 82 52 chr5 175441557 175441696 -27643836 + AluJo SINE Alu 3 136 -166 1915 171 3 0 chr5 175441696 175441995 -27643537 + AluJo SINE Alu 1 300 -12 1462 164 0 49 chr5 175441997 175442241 -27643291 + AluJo SINE Alu 1 232 -80 763 244 82 52 chr5 175442241 175442376 -27643156 + AluJo SINE Alu 136 292 -10 369 43 0 0 chr5 175442376 175442423 -27643109 + (CA)n Simple_repeat Simple_repeat 2 48 0 763 244 82 52 chr5 175442423 175442435 -27643097 + AluJo SINE Alu 292 302 0 216 288 61 15 chr5 175442441 175442507 -27643025 + L2 LINE L2 1761 1829 -1485 2258 101 7 10 chr5 175442515 175442822 -27642710 - AluSx SINE Alu -6 306 1 465 242 87 95 chr5 175442853 175443084 -27642448 - L1MC4 LINE L1 -5 8037 7809 2660 223 67 45 chr5 175443085 175443288 -27642244 + L2 LINE L2 1821 2018 -1296 2383 93 6 3 chr5 175443288 175443599 -27641933 - AluSx SINE Alu 0 312 1 2660 223 67 45 chr5 175443599 175444176 -27641356 + L2 LINE L2 2018 2618 -696 2379 79 24 0 chr5 175444176 175444467 -27641065 - AluSg SINE Alu -12 298 1 2129 107 7 17 chr5 175444471 175444762 -27640770 - AluSc SINE Alu -21 288 1 1346 167 138 29 chr5 175444763 175445038 -27640494 - AluJo SINE Alu -7 305 1 582 254 48 18 chr5 175445038 175445203 -27640329 + L2 LINE L2 3144 3313 0 2017 149 3 10 chr5 175446531 175446832 -27638700 + AluJb SINE Alu 1 299 -13 210 347 42 11 chr5 175447048 175447143 -27638389 - MIR SINE MIR -118 144 47 369 286 88 23 chr5 175447482 175447570 -27637962 - MIR SINE MIR 0 262 181 1656 137 3 113 chr5 175447570 175447760 -27637772 - AluJo SINE Alu -3 299 160 2068 109 4 4 chr5 175447760 175448035 -27637497 - AluSg SINE Alu -35 275 1 1656 137 3 113 chr5 175448035 175448179 -27637353 - AluJo SINE Alu -142 160 2 369 286 88 23 chr5 175448179 175448261 -27637271 - MIR SINE MIR -81 181 81 469 324 57 28 chr5 175448921 175449097 -27636435 - MER5A DNA MER1_type -2 187 7 282 294 154 0 chr5 175449110 175449253 -27636279 - MER5A DNA MER1_type -1 188 24 273 29 0 0 chr5 175453280 175453314 -27632218 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 231 284 0 0 chr5 175454921 175454995 -27630537 + T-rich Low_complexity Low_complexity 1 74 0 204 40 0 0 chr5 175455456 175455481 -27630051 + (TA)n Simple_repeat Simple_repeat 1 25 0 528 338 94 0 chr5 175456097 175456310 -27629222 - MIR SINE MIR -15 247 15 236 203 234 0 chr5 175456769 175456833 -27628699 + MIR SINE MIR 178 256 -6 2649 80 2 75 chr5 175456850 175457028 -27628504 + THE1C LTR MaLR 5 140 -235 2369 89 3 0 chr5 175457028 175457319 -27628213 + AluSg SINE Alu 1 292 -18 2649 80 2 75 chr5 175457319 175457540 -27627992 + THE1C LTR MaLR 140 375 0 277 293 89 41 chr5 175458045 175458168 -27627364 - MIR SINE MIR -60 148 20 187 247 164 27 chr5 175458627 175458700 -27626832 + MIR SINE MIR 121 203 -59 651 185 34 62 chr5 175458824 175458970 -27626562 + MER58B DNA MER1_type 200 341 0 2130 119 3 3 chr5 175459058 175459370 -27626162 + AluSx SINE Alu 1 312 0 302 320 20 30 chr5 175459372 175459472 -27626060 - MIR SINE MIR -93 115 17 785 186 0 0 chr5 175459491 175459609 -27625923 + FLAM_C SINE Alu 1 118 -15 1709 126 35 0 chr5 175459730 175460015 -27625517 - MER44D DNA MER2_type -41 568 4 324 337 0 0 chr5 175460095 175460196 -27625336 - MIR SINE MIR -11 251 151 277 231 0 31 chr5 175460188 175460253 -27625279 - L2 LINE L2 -2 3270 3208 * 201 368 26 45 chr5 175460258 175460413 -27625119 - MIR SINE MIR -110 152 1 1638 155 49 18 chr5 175460688 175460807 -27624725 + AluJb SINE Alu 1 115 -197 180 0 0 0 chr5 175460807 175460827 -27624705 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1638 155 49 18 chr5 175460827 175460991 -27624541 + AluJb SINE Alu 115 293 -19 1663 161 0 7 chr5 175461029 175461308 -27624224 + AluJb SINE Alu 1 277 -35 522 195 0 0 chr5 175461308 175461419 -27624113 + AluJb SINE Alu 197 307 0 238 239 155 0 chr5 175462114 175462185 -27623347 - MIR SINE MIR -70 192 111 427 297 18 0 chr5 175462581 175462692 -27622840 - L2 LINE L2 -1 3312 3200 596 229 164 28 chr5 175462737 175462951 -27622581 + MIR SINE MIR 5 247 -15 281 358 68 7 chr5 175462956 175463104 -27622428 + L2 LINE L2 2933 3089 -183 200 330 80 40 chr5 175463200 175463300 -27622232 + L2 LINE L2 3169 3272 0 1304 182 44 18 chr5 175463451 175463726 -27621806 + AluJo SINE Alu 1 282 -30 1861 72 0 24 chr5 175463726 175463886 -27621646 - AluSx SINE Alu -19 293 137 2041 75 34 20 chr5 175463886 175464179 -27621353 - AluSp SINE Alu -16 297 1 1861 72 0 24 chr5 175464179 175464260 -27621272 - AluSx SINE Alu -175 137 56 1631 153 19 53 chr5 175464267 175464451 -27621081 - AluSx SINE Alu -2 310 140 2010 111 17 0 chr5 175464451 175464748 -27620784 - AluSx SINE Alu -10 302 1 1631 153 19 53 chr5 175464748 175464884 -27620648 - AluSx SINE Alu -172 140 1 356 240 95 10 chr5 175464950 175465066 -27620466 - MIR SINE MIR -72 136 31 2082 116 0 13 chr5 175465503 175465806 -27619726 + AluSc SINE Alu 1 299 -10 549 260 6 41 chr5 175465810 175465979 -27619553 + MIR SINE MIR 49 211 -51 * 1091 216 19 10 chr5 175465976 175466184 -27619348 + MIR SINE MIR 52 261 -1 439 238 16 13 chr5 175466228 175466358 -27619174 - MIR SINE MIR -62 146 53 2094 98 0 3 chr5 175466375 175466662 -27618870 + AluSc SINE Alu 1 286 -23 2748 3 0 0 chr5 175466664 175466968 -27618564 + AluYa5 SINE Alu 1 304 -7 228 250 77 0 chr5 175467056 175467108 -27618424 + Charlie8 DNA MER1_type 25 80 -2337 198 337 11 32 chr5 175467306 175467401 -27618131 - L2 LINE L2 -214 3058 2966 1961 131 0 0 chr5 175467680 175467987 -27617545 + AluSx SINE Alu 1 307 0 2339 89 0 0 chr5 175467991 175468304 -27617228 + AluSq SINE Alu 1 313 0 488 263 66 0 chr5 175468470 175468622 -27616910 + MER103 DNA DNA 4 165 -1 1248 150 0 83 chr5 175468841 175469036 -27616496 - AluJb SINE Alu -1 311 140 1789 141 21 0 chr5 175469036 175469320 -27616212 - AluSx SINE Alu -22 290 1 1248 150 0 83 chr5 175469320 175469377 -27616155 - AluJb SINE Alu -172 140 80 405 296 228 33 chr5 175469875 175470274 -27615258 + L2 LINE L2 2834 3310 -3 309 320 8 33 chr5 175470273 175470395 -27615137 + MIR3 SINE MIR 81 199 -9 * 206 310 69 23 chr5 175470814 175470901 -27614631 - L3 LINE CR1 -113 1464 1374 690 239 71 5 chr5 175470928 175471112 -27614420 + MIR SINE MIR 2 197 -65 2312 82 0 3 chr5 175471186 175471490 -27614042 - AluSp SINE Alu -10 303 1 23 0 0 0 chr5 175471490 175471513 -27614019 + AT_rich Low_complexity Low_complexity 1 23 0 787 156 0 0 chr5 175471561 175471683 -27613849 - FLAM_C SINE Alu -21 122 1 222 319 14 14 chr5 175471791 175471863 -27613669 + MIR SINE MIR 78 149 -59 838 164 0 0 chr5 175471901 175472029 -27613503 + FLAM_C SINE Alu 1 128 -15 2132 74 0 18 chr5 175472280 175472589 -27612943 + AluY SINE Alu 1 304 0 27 0 0 0 chr5 175472621 175472648 -27612884 + AT_rich Low_complexity Low_complexity 1 27 0 865 218 0 0 chr5 175472648 175472827 -27612705 - FRAM SINE Alu 0 176 1 2036 99 27 7 chr5 175472990 175473284 -27612248 - AluSx SINE Alu -12 300 1 1706 99 4 8 chr5 175473927 175474170 -27611362 + AluSg/x SINE Alu 69 310 0 1135 128 2 17 chr5 175474236 175474259 -27611273 + L1MB2 LINE L1 5416 5438 -733 2154 117 0 0 chr5 175474259 175474559 -27610973 + AluSx SINE Alu 1 300 -12 1135 128 2 17 chr5 175474559 175474734 -27610798 + L1MB2 LINE L1 5438 5608 -563 1904 142 0 0 chr5 175474734 175475063 -27610469 + AluSx SINE Alu 1 329 0 1560 154 0 29 chr5 175475067 175475205 -27610327 + AluJo SINE Alu 1 129 -183 2085 127 3 0 chr5 175475205 175475512 -27610020 + AluSq SINE Alu 2 309 -4 1560 154 0 29 chr5 175475512 175475652 -27609880 + AluJo SINE Alu 129 271 -41 22 80 0 0 chr5 175475668 175475718 -27609814 + AT_rich Low_complexity Low_complexity 1 50 0 2120 100 0 10 chr5 175475729 175476059 -27609473 + AluSq SINE Alu 1 327 0 342 61 0 0 chr5 175476271 175476320 -27609212 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 3433 126 12 37 chr5 175476320 175476391 -27609141 + L1MB2 LINE L1 5604 5675 -496 2110 97 10 3 chr5 175476391 175476681 -27608851 - AluSx SINE Alu -20 292 1 3433 126 12 37 chr5 175476681 175477182 -27608350 + L1MB2 LINE L1 5675 6162 -9 247 182 0 0 chr5 175477348 175477392 -27608140 + L1ME4a LINE L1 5979 6022 -99 356 240 64 165 chr5 175477595 175477672 -27607860 - MIR SINE MIR -21 241 158 1922 108 0 4 chr5 175477672 175477941 -27607591 - AluSq SINE Alu -16 297 30 356 240 64 165 chr5 175477941 175477991 -27607541 - MIR SINE MIR -104 158 105 2033 137 0 0 chr5 175477991 175478298 -27607234 + AluSx SINE Alu 1 307 -5 356 240 64 165 chr5 175478298 175478358 -27607174 - MIR SINE MIR -157 105 85 769 187 0 8 chr5 175478358 175478492 -27607040 + FLAM_C SINE Alu 1 133 0 356 240 64 165 chr5 175478492 175478569 -27606963 - MIR SINE MIR -177 85 2 458 326 90 0 chr5 175479261 175479439 -27606093 - MER117 DNA MER1_type 0 197 4 238 366 24 32 chr5 175479473 175479596 -27605936 - MIR3 SINE MIR -72 136 15 285 51 0 0 chr5 175479645 175479684 -27605848 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 805 75 0 0 chr5 175479689 175479795 -27605737 - AluSg/x SINE Alu -36 276 171 2119 78 21 0 chr5 175479812 175480094 -27605438 - AluSc SINE Alu -15 294 7 253 322 0 11 chr5 175480129 175480219 -27605313 + MIR SINE MIR 65 153 -109 220 216 39 0 chr5 175480437 175480488 -27605044 - L2 LINE L2 -225 3047 2995 1631 104 166 8 chr5 175480723 175480982 -27604550 + AluSg SINE Alu 1 300 0 465 214 159 44 chr5 175480982 175481076 -27604456 + L1ME3A LINE L1 5965 6047 -123 2083 107 0 7 chr5 175481076 175481374 -27604158 + AluSg SINE Alu 1 296 -14 465 214 159 44 chr5 175481374 175481461 -27604071 + L1ME3A LINE L1 6047 6167 -3 1045 82 0 0 chr5 175481515 175481650 -27603882 + AluSg/x SINE Alu 157 291 -21 493 176 69 82 chr5 175481746 175481944 -27603588 - MLT1H LTR MaLR -7 548 348 692 205 20 13 chr5 175481944 175482095 -27603437 + LTR41 LTR ERVL 1 152 -621 1959 232 111 38 chr5 175482656 175483234 -27602298 + LTR41 LTR ERVL 152 771 -2 877 254 187 55 chr5 175483237 175483580 -27601952 - MLT1H LTR MaLR -203 392 5 311 320 75 27 chr5 175483592 175483739 -27601793 + MER5A DNA MER1_type 35 188 -1 1929 134 0 0 chr5 175483758 175484042 -27601490 - AluSx SINE Alu -8 304 21 1515 158 42 42 chr5 175484065 175484400 -27601132 - L1MA8 LINE L1 -5 6286 5952 459 277 162 65 chr5 175484412 175484733 -27600799 - L1MCc LINE L1 -4782 2161 1810 1900 145 64 17 chr5 175484787 175485145 -27600387 + THE1C LTR MaLR 1 375 0 263 303 57 35 chr5 175485145 175485576 -27599956 - L1MCc LINE L1 -4939 1484 1221 2062 119 3 0 chr5 175485708 175486010 -27599522 + AluSx SINE Alu 1 303 -9 1489 156 120 33 chr5 175486280 175486440 -27599092 - AluJo SINE Alu -2 300 155 2206 107 0 0 chr5 175486440 175486738 -27598794 - AluSg1 SINE Alu -11 298 1 1489 156 120 33 chr5 175486738 175486852 -27598680 - AluJo SINE Alu -147 155 2 1933 144 3 3 chr5 175486882 175487181 -27598351 + AluJb SINE Alu 1 299 -13 348 259 9 60 chr5 175487513 175487629 -27597903 + MIR SINE MIR 117 226 -36 742 246 32 27 chr5 175488028 175488215 -27597317 + MIR SINE MIR 5 192 -70 498 230 9 143 chr5 175488713 175488867 -27596665 + MIR3 SINE MIR 18 136 -72 2281 99 0 0 chr5 175488867 175489169 -27596363 + AluSx SINE Alu 1 302 -10 498 230 9 143 chr5 175489169 175489231 -27596301 + MIR3 SINE MIR 136 205 -3 215 292 213 12 chr5 175490112 175490235 -27595297 - MIR3 SINE MIR -67 141 9 210 282 48 58 chr5 175490333 175490436 -27595096 + MIR3 SINE MIR 61 162 -46 1851 148 3 16 chr5 175490476 175490786 -27594746 - AluJb SINE Alu -5 307 2 1952 171 48 73 chr5 175491046 175491110 -27594422 + Charlie4a DNA MER1_type 1 65 -1896 1755 187 10 0 chr5 175491110 175491415 -27594117 - AluJo SINE Alu -4 308 1 1952 171 48 73 chr5 175491415 175491617 -27593915 + Charlie4a DNA MER1_type 65 271 -1690 2019 117 3 0 chr5 175491617 175491938 -27593594 - AluSx SINE Alu 0 322 1 1952 171 48 73 chr5 175491938 175491969 -27593563 + Charlie4a DNA MER1_type 271 301 -1660 2129 120 0 0 chr5 175491969 175492268 -27593264 - AluSx SINE Alu -13 299 1 1952 171 48 73 chr5 175492268 175492488 -27593044 + Charlie4a DNA MER1_type 301 508 0 350 338 69 14 chr5 175492813 175492958 -27592574 + MIR3 SINE MIR 1 153 -55 381 311 117 22 chr5 175492964 175493144 -27592388 - MER117 DNA MER1_type 0 197 1 1862 151 6 42 chr5 175493158 175493490 -27592042 + 7SLRNA srpRNA srpRNA 1 320 0 1513 174 3 20 chr5 175493632 175493931 -27591601 + AluJo SINE Alu 6 299 -13 192 77 0 0 chr5 175493955 175493981 -27591551 + (TG)n Simple_repeat Simple_repeat 2 27 0 229 306 28 0 chr5 175494407 175494479 -27591053 - MIR SINE MIR -86 122 49 655 194 39 186 chr5 175494507 175494759 -27590773 - MER102a DNA MER1_type -1087 330 43 1579 186 6 6 chr5 175494759 175495070 -27590462 - AluJb SINE Alu -1 311 1 655 194 39 186 chr5 175495070 175495099 -27590433 - MER102a DNA MER1_type -1374 43 11 2082 114 0 7 chr5 175495099 175495397 -27590135 + AluSx SINE Alu 1 296 -16 655 194 39 186 chr5 175495397 175495427 -27590105 - MER102a DNA MER1_type -1406 11 82 1926 141 0 3 chr5 175495427 175495726 -27589806 + AluSx SINE Alu 1 298 -14 655 194 39 186 chr5 175495726 175495799 -27589733 - MER102a DNA MER1_type -1334 83 1 450 370 62 9 chr5 175495806 175496030 -27589502 + MIR SINE MIR 16 251 -11 1947 72 93 0 chr5 175496305 175496583 -27588949 + AluSp SINE Alu 1 304 -9 1842 113 0 0 chr5 175496741 175496998 -27588534 - AluSx SINE Alu -55 257 1 251 272 75 68 chr5 175497017 175497146 -27588386 + L1ME4a LINE L1 5685 5812 -309 2167 74 3 26 chr5 175497146 175497456 -27588076 + AluY SINE Alu 1 303 -8 251 272 75 68 chr5 175497456 175497620 -27587912 + L1ME4a LINE L1 5812 5980 -141 783 102 0 116 chr5 175497820 175497967 -27587565 - FLAM_C SINE Alu -1 132 3 767 279 92 32 chr5 175497985 175498419 -27587113 + L1MC4a LINE L1 5711 6170 -1638 276 200 0 57 chr5 175498823 175498893 -27586639 - L2 LINE L2 0 3313 3248 434 212 166 1 chr5 175499114 175499291 -27586241 + L1MB8 LINE L1 5101 5322 -824 1663 169 0 22 chr5 175499298 175499617 -27585915 + AluJo SINE Alu 1 312 0 2509 181 39 97 chr5 175499619 175500355 -27585177 + L1MB8 LINE L1 5480 6173 -5 730 260 109 0 chr5 175500568 175500760 -27584772 - MER58C DNA MER1_type -2 213 1 304 264 42 0 chr5 175501460 175501532 -27584000 - MIR SINE MIR -67 141 67 1009 84 22 89 chr5 175501623 175501802 -27583730 + Tigger2a DNA MER2_type 1 167 -267 * 1527 122 107 134 chr5 175501787 175501919 -27583613 + Tigger2 DNA MER2_type 2336 2470 -248 397 164 0 0 chr5 175501919 175501986 -27583546 - L1PA15 LINE L1 -9 6156 6090 1527 122 107 134 chr5 175501986 175502247 -27583285 + Tigger2 DNA MER2_type 2470 2718 0 195 311 40 0 chr5 175502389 175502463 -27583069 - MER5A DNA MER1_type -52 137 61 243 328 92 23 chr5 175503057 175503188 -27582344 - MIR SINE MIR -51 211 72 220 299 78 39 chr5 175505406 175505483 -27580049 + L2 LINE L2 3171 3250 -22 267 348 110 8 chr5 175505516 175505634 -27579898 + L2 LINE L2 3143 3272 0 218 336 176 32 chr5 175505608 175505954 -27579578 - L2 LINE L2 -1 3271 2888 * 300 234 32 53 chr5 175506570 175506664 -27578868 - MIR SINE MIR -60 148 57 250 272 46 84 chr5 175507743 175507982 -27577550 + L1MC5 LINE L1 5588 5817 -1991 2118 108 4 4 chr5 175507990 175508307 -27577225 + AluSc SINE Alu 1 317 0 1243 200 118 15 chr5 175508358 175508628 -27576904 + AluJo SINE Alu 1 298 -14 418 188 7 81 chr5 175508630 175508779 -27576753 + L1MC5 LINE L1 5746 5883 -1925 1678 158 30 27 chr5 175509173 175509471 -27576061 + AluJo SINE Alu 6 304 -8 2543 87 3 0 chr5 175509619 175509930 -27575602 + AluSq SINE Alu 1 312 -1 629 199 13 26 chr5 175509985 175510136 -27575396 + L1MC5 LINE L1 6643 6791 -1170 1209 197 117 93 chr5 175510139 175510774 -27574758 + L1MC5 LINE L1 6876 7525 -436 854 146 16 0 chr5 175510792 175510915 -27574617 - FLAM_C SINE Alu -18 125 1 313 245 76 86 chr5 175510915 175510949 -27574583 + L1MC5 LINE L1 7462 7495 -466 211 71 48 0 chr5 175510949 175510991 -27574541 + (TA)n Simple_repeat Simple_repeat 1 44 0 313 245 76 86 chr5 175510991 175511295 -27574237 + L1MC5 LINE L1 7495 7757 -204 883 189 69 74 chr5 175511304 175511654 -27573878 + L1MC5 LINE L1 7570 7917 -44 551 302 73 44 chr5 175512344 175512592 -27572940 + MIR SINE MIR 1 255 -7 190 269 45 30 chr5 175513667 175513734 -27571798 + MIR SINE MIR 86 153 -55 274 278 103 24 chr5 175513744 175513870 -27571662 + MLT1J LTR MaLR 1 136 -375 334 261 33 0 chr5 175514044 175514136 -27571396 + MLT1J LTR MaLR 377 471 -40 192 321 0 0 chr5 175514629 175514685 -27570847 + L3 LINE CR1 1508 1563 -14 526 270 103 32 chr5 175515094 175515279 -27570253 + MIR SINE MIR 8 205 -57 1143 211 0 5 chr5 175515281 175515494 -27570038 - MER8 DNA MER2_type 0 239 28 2005 116 19 0 chr5 175515643 175515911 -27569621 + AluSx SINE Alu 1 273 -39 918 110 0 0 chr5 175515911 175516027 -27569505 + AluSg/x SINE Alu 190 308 -2 2189 130 3 0 chr5 175516035 175516342 -27569190 + AluSq SINE Alu 1 308 -5 481 238 54 7 chr5 175517396 175517543 -27567989 + L1ME LINE L1 5618 5771 -350 651 156 0 0 chr5 175517630 175517726 -27567806 - AluS SINE Alu -216 96 1 2281 115 3 3 chr5 175519477 175519782 -27565750 + AluSp SINE Alu 1 305 -8 325 225 271 8 chr5 175519782 175519911 -27565621 - MIR3 SINE MIR -11 197 35 2371 72 10 3 chr5 175520315 175520606 -27564926 + AluSq SINE Alu 1 293 -20 184 270 68 54 chr5 175520875 175520949 -27564583 + MIR3 SINE MIR 129 203 -5 226 254 222 16 chr5 175521079 175521205 -27564327 + MIR SINE MIR 109 260 -2 366 276 201 15 chr5 175522282 175522481 -27563051 + L2 LINE L2 3029 3264 -8 736 289 65 4 chr5 175522877 175523109 -27562423 - MIR SINE MIR -5 257 12 282 267 200 7 chr5 175524402 175524552 -27560980 - MIR SINE MIR 0 262 84 207 266 151 75 chr5 175524568 175524767 -27560765 + L2 LINE L2 2988 3201 -112 1081 112 56 0 chr5 175524788 175524967 -27560565 + MER30 DNA MER1_type 1 189 -41 2363 66 3 17 chr5 175525030 175525331 -27560201 - AluY SINE Alu -1 310 14 2236 99 0 23 chr5 175525573 175525876 -27559656 - AluSx SINE Alu -16 296 1 361 212 248 22 chr5 175526001 175526138 -27559394 - MIR3 SINE MIR -20 188 21 2502 87 3 0 chr5 175526848 175527157 -27558375 + AluSp SINE Alu 1 310 -3 219 235 198 0 chr5 175527465 175527546 -27557986 + MIR SINE MIR 102 198 -64 774 120 84 30 chr5 175527644 175527811 -27557721 + MER53 DNA DNA 2 177 -12 315 333 25 54 chr5 175527870 175528074 -27557458 + MIR3 SINE MIR 6 203 -5 365 253 72 45 chr5 175528133 175528256 -27557276 - MER5A DNA MER1_type -15 163 24 2515 58 3 0 chr5 175528378 175528672 -27556860 - AluY SINE Alu -12 299 5 302 181 139 14 chr5 175528703 175528775 -27556757 + Tigger3(Golem) DNA MER2_type 2 82 -2947 22 0 0 0 chr5 175528794 175528816 -27556716 + AT_rich Low_complexity Low_complexity 1 22 0 1236 92 71 0 chr5 175528816 175529012 -27556520 - L1MA3 LINE L1 0 6305 6096 22 35 0 0 chr5 175529019 175529048 -27556484 + AT_rich Low_complexity Low_complexity 1 29 0 1345 154 63 46 chr5 175529084 175529124 -27556408 + Tigger3(Golem) DNA MER2_type 2740 2778 -251 1999 115 0 64 chr5 175529124 175529437 -27556095 - AluSx SINE Alu -19 293 1 1345 154 63 46 chr5 175529437 175529681 -27555851 + Tigger3(Golem) DNA MER2_type 2778 3029 0 736 168 0 8 chr5 175530510 175530629 -27554903 - FLAM_C SINE Alu -15 118 1 315 298 141 45 chr5 175530657 175530855 -27554677 - MIR SINE MIR 0 262 46 1186 164 0 6 chr5 175531146 175531323 -27554209 - AluJb SINE Alu -14 298 123 1480 196 43 11 chr5 175531349 175531629 -27553903 - AluJo SINE Alu -23 289 1 278 231 162 43 chr5 175532990 175533107 -27552425 + MIR3 SINE MIR 1 131 -77 308 198 58 23 chr5 175533410 175533496 -27552036 + MER44D DNA MER2_type 33 391 -218 207 0 0 0 chr5 175533654 175533677 -27551855 + (A)n Simple_repeat Simple_repeat 1 23 0 2205 111 24 0 chr5 175533677 175533974 -27551558 + AluSp SINE Alu 1 304 -9 1316 130 65 9 chr5 175533974 175534204 -27551328 + MER44D DNA MER2_type 462 704 -1 712 166 294 13 chr5 175534275 175534510 -27551022 + MER33 DNA MER1_type 2 302 -22 637 236 30 36 chr5 175535141 175535306 -27550226 + MIR SINE MIR 24 187 -75 2245 106 3 0 chr5 175535526 175535827 -27549705 - AluSx SINE Alu -10 302 1 198 282 107 19 chr5 175535854 175535957 -27549575 - MIR3 SINE MIR -94 114 3 412 246 139 82 chr5 175536442 175536759 -27548773 + L2 LINE L2 2570 2904 -410 283 167 33 0 chr5 175537458 175537518 -27548014 - L1MB8 LINE L1 -5 6173 6112 1622 134 17 4 chr5 175537519 175537757 -27547775 + AluSx SINE Alu 1 241 -71 2283 89 0 4 chr5 175537777 175538100 -27547432 + AluSg SINE Alu 1 322 0 201 284 181 9 chr5 175538262 175538378 -27547154 + L2 LINE L2 3137 3272 0 * 254 315 182 32 chr5 175538354 175538694 -27546838 - L3 LINE CR1 -7 1570 1180 393 314 145 14 chr5 175539367 175539574 -27545958 - MIR SINE MIR -26 236 3 417 324 34 7 chr5 175539620 175539768 -27545764 + MIR3 SINE MIR 54 205 -3 212 312 110 7 chr5 175540354 175540508 -27545024 + L2 LINE L2 2682 2851 -463 277 143 312 0 chr5 175540736 175540813 -27544719 + L2 LINE L2 3213 3313 0 661 245 228 80 chr5 175540830 175540964 -27544568 - L2 LINE L2 0 3313 3200 1766 176 0 11 chr5 175540964 175541248 -27544284 + AluJb SINE Alu 1 281 -31 661 245 228 80 chr5 175541248 175541723 -27543809 - L2 LINE L2 -113 3200 2797 2305 119 0 0 chr5 175541723 175542035 -27543497 - AluSx SINE Alu 0 312 1 1657 157 80 7 chr5 175542037 175542323 -27543209 - AluJo SINE Alu -5 307 1 2464 81 0 3 chr5 175542333 175542629 -27542903 - AluSx SINE Alu -15 297 3 1739 151 7 43 chr5 175542634 175542938 -27542594 - AluJo SINE Alu -19 293 1 661 245 228 80 chr5 175542938 175543002 -27542530 - L2 LINE L2 -526 2787 2734 921 196 0 6 chr5 175543002 175543160 -27542372 - FRAM SINE Alu -9 157 1 661 245 228 80 chr5 175543160 175543236 -27542296 - L2 LINE L2 -579 2734 2414 338 331 43 25 chr5 175543222 175543296 -27542236 + MIR SINE MIR 93 164 -98 * 2336 94 10 3 chr5 175543296 175543603 -27541929 + AluSp SINE Alu 1 309 -4 338 331 43 25 chr5 175543603 175543691 -27541841 + MIR SINE MIR 164 258 -4 2287 104 0 13 chr5 175544388 175544697 -27540835 - AluSg SINE Alu -4 306 2 265 86 0 0 chr5 175545565 175545600 -27539932 + U2 snRNA snRNA 1 35 -153 250 209 198 51 chr5 175545687 175545864 -27539668 - L1MC5 LINE L1 -268 7693 7491 312 347 20 34 chr5 175546268 175546415 -27539117 - MIR3 SINE MIR -15 193 49 2137 78 14 18 chr5 175546415 175546739 -27538793 + AluSx SINE Alu 1 323 0 1391 144 36 16 chr5 175546739 175546989 -27538543 - MER47A DNA MER2_type -111 255 1 192 156 0 44 chr5 175547328 175547373 -27538159 - MIR SINE MIR -55 153 111 698 248 50 20 chr5 175547408 175547606 -27537926 - MIR SINE MIR -29 233 30 399 199 0 46 chr5 175548729 175548880 -27536652 + G-rich Low_complexity Low_complexity 3 146 0 28 102 0 0 chr5 175549552 175549650 -27535882 + GC_rich Low_complexity Low_complexity 1 98 0 22 0 0 0 chr5 175550557 175550579 -27534953 + GC_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 175551223 175551250 -27534282 + GC_rich Low_complexity Low_complexity 1 27 0 33 107 0 0 chr5 175551322 175551453 -27534079 + GC_rich Low_complexity Low_complexity 1 131 0 320 292 71 9 chr5 175552173 175552286 -27533246 + MIR SINE MIR 30 149 -59 483 231 164 51 chr5 175552319 175552575 -27532957 - L2 LINE L2 -3 3310 3026 259 260 144 29 chr5 175552548 175552652 -27532880 - MER5A DNA MER1_type -38 151 36 * 861 156 0 14 chr5 175553227 175553368 -27532164 - FRAM SINE Alu -45 131 1 2238 98 21 0 chr5 175553715 175554002 -27531530 - AluSx SINE Alu -19 293 1 298 275 110 46 chr5 175554019 175554128 -27531404 - MIR3 SINE MIR -11 197 82 252 143 0 0 chr5 175755195 175755237 -27330295 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 97 0 0 chr5 175755723 175755754 -27329778 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 195 317 79 40 chr5 175755865 175755966 -27329566 - L2 LINE L2 -27 3245 3141 185 375 125 0 chr5 175756066 175756194 -27329338 - L2 LINE L2 -270 3043 2900 245 235 88 81 chr5 175756411 175756547 -27328985 + L2 LINE L2 3075 3211 -102 708 288 63 24 chr5 175756706 175757223 -27328309 - MLT1H1 LTR MaLR 0 590 1 554 296 45 31 chr5 175757297 175757520 -27328012 + MIR SINE MIR 18 243 -19 746 22 0 0 chr5 175759132 175759223 -27326309 - 5S rRNA rRNA -30 91 1 2276 57 3 0 chr5 175759496 175759779 -27325753 + L1PA7 LINE L1 5868 6151 -3 297 0 0 0 chr5 175760203 175760236 -27325296 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr5 175760362 175760398 -27325134 + AT_rich Low_complexity Low_complexity 1 36 0 2149 132 0 0 chr5 175761992 175762287 -27323245 - AluSc SINE Alu -14 295 1 376 278 53 70 chr5 175762333 175762520 -27323012 - MLT1K LTR MaLR -41 547 364 806 244 35 8 chr5 175762960 175763218 -27322314 + L1MC3 LINE L1 5259 5523 -2285 942 152 43 5 chr5 175763287 175763471 -27322061 + MER39B LTR ERV1 463 653 0 433 156 0 180 chr5 175763471 175763555 -27321977 + L1MC3 LINE L1 6655 6710 -1075 2273 121 3 0 chr5 175763555 175763860 -27321672 - AluSx SINE Alu -6 306 1 433 156 0 180 chr5 175763860 175763903 -27321629 + L1MC3 LINE L1 6710 6759 -1026 747 161 146 20 chr5 175764003 175764076 -27321456 + L1MC3 LINE L1 6763 6825 -960 198 0 0 0 chr5 175764076 175764098 -27321434 + (CA)n Simple_repeat Simple_repeat 1 22 0 2048 67 0 142 chr5 175764098 175764457 -27321075 + AluSc SINE Alu 1 308 -1 747 161 146 20 chr5 175764457 175764581 -27320951 + L1MC3 LINE L1 6824 6986 -799 262 137 27 14 chr5 175764995 175765068 -27320464 + L1MD3 LINE L1 7000 7073 -922 1386 197 39 37 chr5 175765084 175765131 -27320401 - Charlie1b DNA MER1_type -2378 383 338 3794 133 36 22 chr5 175765131 175765820 -27319712 + LTR34 LTR ERV1 1 699 0 1386 197 39 37 chr5 175765820 175766153 -27319379 - Charlie1b DNA MER1_type -2423 338 2 1386 200 36 48 chr5 175766154 175766628 -27318904 + L1MC5 LINE L1 7330 7797 -164 22 0 0 30 chr5 175767211 175767227 -27318305 + AT_rich Low_complexity Low_complexity 1 16 -16 2129 143 0 0 chr5 175767227 175767535 -27317997 + AluSx SINE Alu 1 308 -4 22 0 0 30 chr5 175767535 175767551 -27317981 + AT_rich Low_complexity Low_complexity 16 32 0 645 160 0 0 chr5 175768624 175768730 -27316802 - Tigger7 DNA MER2_type 0 2587 2482 949 221 52 5 chr5 175768731 175768944 -27316588 - Tigger7 DNA MER2_type -2253 234 12 499 176 184 0 chr5 175769021 175769157 -27316375 + L1MA9 LINE L1 6119 6279 -33 2352 99 3 3 chr5 175769377 175769689 -27315843 + AluSx SINE Alu 1 312 0 1153 156 0 0 chr5 175769693 175769866 -27315666 + AluSg/x SINE Alu 129 301 -11 254 293 99 38 chr5 175770396 175770608 -27314924 - L2 LINE L2 0 3313 3089 1837 115 26 69 chr5 175771466 175771770 -27313762 - AluSg SINE Alu -19 291 1 27 73 0 0 chr5 175771882 175771937 -27313595 + AT_rich Low_complexity Low_complexity 1 55 0 364 422 44 4 chr5 175772048 175772318 -27313214 - L2 LINE L2 -103 3169 2889 256 239 0 0 chr5 175772401 175772447 -27313085 - L3 LINE CR1 -14 1563 1518 393 365 108 14 chr5 175773513 175773735 -27311797 + MIR SINE MIR 7 249 -13 1539 218 37 13 chr5 175774191 175774572 -27310960 + MLT1B LTR MaLR 1 390 0 505 308 16 53 chr5 175774582 175774809 -27310723 + MIR SINE MIR 33 252 -10 219 260 118 88 chr5 175775709 175775817 -27309715 + L3b LINE CR1 1219 1322 -261 182 37 37 0 chr5 175775817 175775844 -27309688 + (TAA)n Simple_repeat Simple_repeat 2 29 0 219 260 118 88 chr5 175775844 175775857 -27309675 + L3b LINE CR1 1322 1333 -250 2203 109 0 10 chr5 175775857 175776151 -27309381 + AluSx SINE Alu 21 311 -1 219 260 118 88 chr5 175776151 175776232 -27309300 + L3b LINE CR1 1333 1428 -155 259 236 321 21 chr5 175776443 175776583 -27308949 + MIR SINE MIR 3 184 -78 191 313 16 117 chr5 175776617 175776745 -27308787 - MIR SINE MIR -87 175 61 2409 87 0 50 chr5 175776833 175777156 -27308376 + AluSp SINE Alu 1 307 -6 501 199 36 169 chr5 175777306 175777638 -27307894 + MLT1J LTR MaLR 221 508 -3 274 200 0 18 chr5 175777691 175777746 -27307786 - MER81 DNA DNA -55 59 6 1042 332 87 32 chr5 175777989 175778708 -27306824 - L2 LINE L2 0 3272 2496 2234 124 0 3 chr5 175778776 175779104 -27306428 + AluSx SINE Alu 1 312 0 25 0 0 0 chr5 175779881 175779906 -27305626 + AT_rich Low_complexity Low_complexity 1 25 0 21 21 0 64 chr5 175780299 175780346 -27305186 + AT_rich Low_complexity Low_complexity 1 44 0 370 279 137 2 chr5 175780425 175780612 -27304920 - MIR SINE MIR 0 262 9 1037 259 150 10 chr5 175781270 175781683 -27303849 + MLT2B1 LTR ERVL 3 473 -47 468 130 0 0 chr5 175781685 175781777 -27303755 + (TAGA)n Simple_repeat Simple_repeat 1 92 0 287 309 184 0 chr5 175782386 175782522 -27303010 + MER91A DNA MER1_type 1 161 -35 339 343 52 0 chr5 175782662 175782796 -27302736 + L2 LINE L2 3123 3263 -9 248 184 11 126 chr5 175782872 175782959 -27302573 - MIR SINE MIR -60 202 126 22 35 0 0 chr5 175782975 175783004 -27302528 + AT_rich Low_complexity Low_complexity 1 29 0 423 289 48 44 chr5 175783051 175783200 -27302332 - L1ME4a LINE L1 -262 5859 5707 2273 100 0 7 chr5 175783200 175783501 -27302031 + AluY SINE Alu 1 299 -12 423 289 48 44 chr5 175783501 175783624 -27301908 - L1ME4a LINE L1 -414 5707 5586 255 320 60 0 chr5 175783758 175783858 -27301674 - MIR SINE MIR 0 262 157 1624 199 30 0 chr5 175784091 175784266 -27301266 - AluJb SINE Alu -5 307 118 306 106 0 0 chr5 175784266 175784313 -27301219 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1624 199 30 0 chr5 175784313 175784433 -27301099 - AluJb SINE Alu -194 118 3 767 273 88 21 chr5 175785102 175785340 -27300192 + MIR SINE MIR 9 262 0 533 256 106 6 chr5 175785635 175785795 -27299737 - MIR3 SINE MIR -15 193 18 1710 202 0 0 chr5 175785992 175786289 -27299243 + AluJb SINE Alu 1 297 -15 334 337 53 37 chr5 175787217 175787460 -27298072 + L1ME4a LINE L1 5317 5563 -2245 368 307 58 23 chr5 175787481 175787823 -27297709 + L1ME4a LINE L1 5591 5944 -177 2098 153 48 25 chr5 175788206 175788606 -27296926 + Tigger2a DNA MER2_type 1 409 -25 196 286 52 52 chr5 175788750 175788827 -27296705 + L2 LINE L2 3195 3271 -1 2146 131 131 8 chr5 175788950 175789331 -27296201 + MSTA LTR MaLR 1 428 0 352 348 79 57 chr5 175790200 175790691 -27294841 - L2 LINE L2 0 3313 2812 199 232 58 116 chr5 175790815 175790884 -27294648 + L2 LINE L2 3208 3272 0 197 310 35 11 chr5 175791508 175791595 -27293937 + L2 LINE L2 2697 2785 -529 223 259 0 0 chr5 175792323 175792381 -27293151 + MIR SINE MIR 4 61 -201 242 266 116 58 chr5 175792389 175792562 -27292970 + L2 LINE L2 3130 3312 -1 21 0 0 0 chr5 175793727 175793748 -27291784 + AT_rich Low_complexity Low_complexity 1 21 0 801 214 0 12 chr5 175794677 175794845 -27290687 - MER20 DNA MER1_type -51 168 3 303 371 69 26 chr5 175795308 175795540 -27289992 - MIR SINE MIR -11 251 10 1541 249 48 14 chr5 175795575 175796017 -27289515 + LTR16C LTR ERVL 32 488 -3 21 0 0 0 chr5 175796114 175796135 -27289397 + AT_rich Low_complexity Low_complexity 1 21 0 504 276 55 6 chr5 175796207 175796370 -27289162 + L1ME1 LINE L1 213 383 -6013 552 253 52 28 chr5 175796387 175796636 -27288896 + L1ME1 LINE L1 910 1164 -5232 207 200 60 0 chr5 175796660 175796710 -27288822 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1013 208 42 16 chr5 175796711 175797023 -27288509 + L1ME1 LINE L1 2051 2370 -4026 2173 230 48 35 chr5 175797038 175797458 -27288074 + L1ME1 LINE L1 5241 5654 -581 1959 146 0 10 chr5 175797458 175797760 -27287772 + AluSx SINE Alu 1 299 -13 2173 230 48 35 chr5 175797760 175798154 -27287378 + L1ME1 LINE L1 5654 6067 -168 911 239 44 16 chr5 175798272 175798590 -27286942 - L1MEc LINE L1 -4019 2377 2051 455 265 7 0 chr5 175798655 175798802 -27286730 - L1MEc LINE L1 -5232 1164 1017 386 283 43 0 chr5 175798795 175798933 -27286599 + L1MA10 LINE L1 6188 6331 -3 * 409 254 91 9 chr5 175799255 175799365 -27286167 + MER5A DNA MER1_type 10 128 -61 1583 167 80 0 chr5 175799561 175799727 -27285805 - AluJb SINE Alu 0 308 157 189 74 0 0 chr5 175799727 175799754 -27285778 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1583 167 80 0 chr5 175799754 175799874 -27285658 - AluJb SINE Alu -151 157 1 806 246 125 37 chr5 175799888 175800241 -27285291 - L1ME2 LINE L1 -10 6154 5771 207 261 0 0 chr5 175801599 175801645 -27283887 - L2 LINE L2 -2 3311 3266 2175 101 3 55 chr5 175801928 175802254 -27283278 + AluSc SINE Alu 1 309 0 1355 184 34 41 chr5 175802872 175803138 -27282394 - AluJo SINE Alu -48 264 1 245 296 111 15 chr5 175803193 175803328 -27282204 - MIR SINE MIR -58 204 57 2818 6 0 3 chr5 175804122 175804434 -27281098 + AluYa5 SINE Alu 1 311 0 722 302 145 28 chr5 175804657 175805317 -27280215 - L2 LINE L2 0 3313 2581 412 290 61 15 chr5 175805714 175805807 -27279725 - MIR SINE MIR -6 256 154 5756 195 33 53 chr5 175805807 175805905 -27279627 - Charlie1a DNA MER1_type -1306 1455 1357 531 0 0 0 chr5 175805905 175805964 -27279568 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 5756 195 33 53 chr5 175805964 175807349 -27278183 - Charlie1a DNA MER1_type -1404 1357 1 412 290 61 15 chr5 175807349 175807386 -27278146 - MIR SINE MIR -108 154 120 302 263 25 12 chr5 175807558 175807638 -27277894 - MIR SINE MIR -156 106 26 472 316 117 5 chr5 175808566 175808772 -27276760 - MIR SINE MIR -1 261 33 2004 159 0 0 chr5 175808886 175809181 -27276351 - AluSx SINE Alu -17 295 1 631 200 0 57 chr5 175809194 175809334 -27276198 - FLAM_C SINE Alu 0 133 2 278 284 20 81 chr5 175810010 175810158 -27275374 + L2 LINE L2 3175 3313 0 308 227 0 27 chr5 175810273 175810348 -27275184 - MIR SINE MIR -70 192 120 227 278 18 142 chr5 175810365 175810534 -27274998 + MIR SINE MIR 1 148 -114 1948 104 11 14 chr5 175810549 175810858 -27274674 + AluSc SINE Alu 1 308 0 938 190 181 0 chr5 175810953 175811169 -27274363 + MIR SINE MIR 2 256 -6 320 250 76 38 chr5 175813038 175813170 -27272362 + MIR SINE MIR 117 253 -9 315 0 0 0 chr5 175813182 175813217 -27272315 + (CA)n Simple_repeat Simple_repeat 1 35 0 362 170 134 15 chr5 175814116 175814213 -27271319 + L1PB3 LINE L1 5813 5919 -235 1504 157 18 21 chr5 175814225 175814505 -27271027 + L1PB4 LINE L1 5865 6143 -13 2761 227 74 35 chr5 175815159 175816241 -27269291 + L1ME2 LINE L1 5032 6154 -10 1948 9 0 0 chr5 175816879 175817101 -27268431 - L1PA2 LINE L1 0 6155 5934 22 0 0 0 chr5 175817212 175817234 -27268298 + AT_rich Low_complexity Low_complexity 1 22 0 279 244 278 0 chr5 175818287 175818402 -27267130 + MIR SINE MIR 109 255 -7 401 224 67 52 chr5 175818581 175818715 -27266817 + MER103 DNA DNA 1 136 -30 1061 286 89 55 chr5 175818966 175819551 -27265981 - MLT1L LTR MaLR -10 605 1 203 317 110 0 chr5 175820604 175820686 -27264846 - MIR SINE MIR -78 184 94 320 336 109 14 chr5 175820909 175821129 -27264403 + MIR SINE MIR 18 258 -4 281 366 0 0 chr5 175821857 175821950 -27263582 - MIR3 SINE MIR -25 183 91 12995 139 58 22 chr5 175822073 175822126 -27263406 - Tigger1 DNA MER2_type 0 2418 2368 279 0 0 0 chr5 175822126 175822157 -27263375 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 12995 139 58 22 chr5 175822157 175822942 -27262590 - Tigger1 DNA MER2_type -50 2368 1613 1212 165 131 22 chr5 175822942 175823209 -27262323 - AluJo SINE Alu -16 296 1 12995 139 58 22 chr5 175823209 175824700 -27260832 - Tigger1 DNA MER2_type -805 1613 3 351 287 78 17 chr5 175824704 175824819 -27260713 - MIR SINE MIR -67 141 20 654 293 45 27 chr5 175825498 175825720 -27259812 + MIR SINE MIR 24 249 -13 259 341 70 39 chr5 175826000 175826129 -27259403 - L2 LINE L2 -6 3266 3134 230 290 14 0 chr5 175826947 175827016 -27258516 - MLT1K LTR MaLR 0 588 519 339 203 0 0 chr5 175827310 175827384 -27258148 + (TG)n Simple_repeat Simple_repeat 1 74 0 613 262 151 0 chr5 175828337 175828543 -27256989 + MIR SINE MIR 25 261 -1 643 287 98 29 chr5 175828667 175828911 -27256621 - MIR SINE MIR 0 262 2 988 241 74 59 chr5 175829199 175829655 -27255877 - MER39 LTR ERV1 0 707 53 262 305 102 39 chr5 175829889 175830017 -27255515 + L2 LINE L2 3112 3247 -25 206 306 56 14 chr5 175830826 175830898 -27254634 - MER5A DNA MER1_type -18 171 97 1581 152 72 4 chr5 175831171 175831435 -27254097 + AluJb SINE Alu 1 282 -30 623 78 11 0 chr5 175831435 175831525 -27254007 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 274 26 34 chr5 175832155 175832272 -27253260 + MIR3 SINE MIR 60 175 -33 225 0 0 0 chr5 175832392 175832417 -27253115 + (T)n Simple_repeat Simple_repeat 1 25 0 769 272 31 35 chr5 175832959 175833015 -27252517 - MER102a DNA MER1_type -1088 329 274 2339 105 3 0 chr5 175833015 175833321 -27252211 + AluSc SINE Alu 1 307 -2 769 272 31 35 chr5 175833321 175833518 -27252014 - MER102a DNA MER1_type -1143 274 77 806 112 14 35 chr5 175833531 175833674 -27251858 - L1MA6 LINE L1 -427 5873 5734 2116 186 9 25 chr5 175833674 175834108 -27251424 + L1MA6 LINE L1 5872 6300 0 235 328 112 15 chr5 175834420 175834554 -27250978 + MIR SINE MIR 46 192 -70 3088 114 40 22 chr5 175834560 175835060 -27250472 - Tigger3(Golem) DNA MER2_type -1 3028 2520 782 223 20 0 chr5 175835079 175835227 -27250305 - Tigger3(Golem) DNA MER2_type -2877 152 2 3192 131 30 27 chr5 175835305 175835830 -27249702 + MER1A DNA MER1_type 1 527 0 190 338 0 27 chr5 175837019 175837093 -27248439 + MIR SINE MIR 16 87 -121 249 62 0 104 chr5 175837180 175837228 -27248304 + AluJb SINE Alu 27 69 -234 1490 146 0 34 chr5 175837252 175837491 -27248041 + AluJb SINE Alu 64 294 -18 28 29 0 0 chr5 175837494 175837529 -27248003 + AT_rich Low_complexity Low_complexity 1 35 0 3839 141 53 22 chr5 175837875 175838606 -27246926 - Tigger3(Golem) DNA MER2_type -3 3026 2273 499 252 0 27 chr5 175838592 175838703 -27246829 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 418 308 39 0 chr5 175838716 175838846 -27246686 + L2 LINE L2 3179 3313 0 265 191 206 53 chr5 175839449 175839580 -27245952 - MLT1L LTR MaLR -104 511 361 267 334 48 43 chr5 175839760 175839996 -27245536 - L2 LINE L2 -248 3024 2778 2130 24 0 0 chr5 175841257 175841504 -27244028 - L1PA3 LINE L1 0 6155 5909 472 200 61 9 chr5 175841655 175841770 -27243762 - L1MA10 LINE L1 -18 6316 6196 2050 123 7 3 chr5 175841864 175842164 -27243368 + AluSq SINE Alu 1 301 -12 218 354 13 0 chr5 175842324 175842403 -27243129 - MIR SINE MIR -79 129 50 264 264 60 72 chr5 175842938 175843105 -27242427 + MIR SINE MIR 41 205 -57 211 398 49 0 chr5 175843241 175843364 -27242168 - MIR3 SINE MIR -13 195 67 350 333 126 17 chr5 175843412 175843586 -27241946 + MIR SINE MIR 56 248 -14 457 219 0 0 chr5 175845180 175845276 -27240256 - L1MB5 LINE L1 -6 6168 6073 24 67 0 0 chr5 175845352 175845397 -27240135 + AT_rich Low_complexity Low_complexity 1 45 0 253 313 12 12 chr5 175845725 175845808 -27239724 + MIR SINE MIR 68 150 -58 202 253 228 0 chr5 175845814 175845893 -27239639 - L2 LINE L2 -7 3265 3169 269 271 125 10 chr5 175845957 175846053 -27239479 - MLT2F LTR ERVL -547 116 10 13867 148 30 16 chr5 175846395 175846431 -27239101 + Tigger1 DNA MER2_type 3 37 -2381 2734 88 3 0 chr5 175846431 175846785 -27238747 + THE1A LTR MaLR 1 355 0 13867 148 30 16 chr5 175846785 175849132 -27236400 + Tigger1 DNA MER2_type 37 2418 0 228 293 104 47 chr5 175849155 175849261 -27236271 + L2 LINE L2 3200 3311 -2 318 303 112 26 chr5 175849264 175849416 -27236116 - MIR SINE MIR -49 213 49 221 208 0 21 chr5 175849710 175849758 -27235774 + L2 LINE L2 3265 3311 -2 282 56 0 0 chr5 175852122 175852158 -27233374 + (TG)n Simple_repeat Simple_repeat 2 37 0 287 275 6 50 chr5 175853574 175853756 -27231776 + CT-rich Low_complexity Low_complexity 3 176 0 270 320 93 7 chr5 175854080 175854230 -27231302 + L3 LINE CR1 1187 1349 -228 21 57 0 0 chr5 175854574 175854609 -27230923 + AT_rich Low_complexity Low_complexity 1 35 0 530 254 42 58 chr5 175854819 175855008 -27230524 - MIR3 SINE MIR -4 204 19 269 246 0 31 chr5 175855180 175855245 -27230287 - L2 LINE L2 -3 3310 3248 705 222 48 22 chr5 175855988 175856218 -27229314 - MER106A DNA MER1_type 0 236 1 297 312 19 52 chr5 175858134 175858288 -27227244 + MIR SINE MIR 114 262 0 2138 139 0 0 chr5 175859121 175859430 -27226102 + AluSx SINE Alu 2 310 -2 447 353 0 0 chr5 175859997 175860133 -27225399 - MIR3 SINE MIR -14 194 59 270 289 149 26 chr5 175860642 175860756 -27224776 - L2 LINE L2 -4 3309 3182 356 366 118 8 chr5 175860998 175861252 -27224280 - L2 LINE L2 -679 2635 2354 545 286 62 60 chr5 175861289 175861733 -27223799 - LTR16A LTR ERVL -13 437 2 446 316 110 44 chr5 175861772 175862383 -27223149 - L2 LINE L2 -1055 2259 1609 190 270 127 0 chr5 175862947 175863010 -27222522 + MIR SINE MIR 73 143 -65 285 226 58 44 chr5 175864040 175864177 -27221355 + Charlie7 DNA MER1_type 2469 2607 -5 990 230 28 35 chr5 175866130 175866413 -27219119 - MLT1C LTR MaLR 0 467 187 1829 176 0 3 chr5 175866453 175866749 -27218783 - AluJo SINE Alu -9 303 9 812 191 0 0 chr5 175866762 175866903 -27218629 - FLAM_C SINE Alu -2 141 1 605 200 23 0 chr5 175866904 175867034 -27218498 - MLT1C LTR MaLR -280 187 55 354 292 45 39 chr5 175867398 175867706 -27217826 + L1ME4a LINE L1 5611 5920 -201 859 244 24 10 chr5 175867716 175867925 -27217607 + MER20 DNA MER1_type 1 212 -7 449 298 13 7 chr5 175867955 175868106 -27217426 + MIR SINE MIR 110 261 -1 1993 239 62 11 chr5 175868178 175868725 -27216807 - MER90 LTR ERV1 0 575 1 2261 114 3 16 chr5 175869226 175869542 -27215990 + AluSx SINE Alu 1 312 0 22 88 0 0 chr5 175869791 175869848 -27215684 + AT_rich Low_complexity Low_complexity 1 57 0 2320 98 3 0 chr5 175870717 175871022 -27214510 - AluSx SINE Alu -6 306 1 271 320 62 10 chr5 175871293 175871390 -27214142 + MIR SINE MIR 19 120 -88 281 291 55 0 chr5 175871410 175871520 -27214012 - MER117 DNA MER1_type -7 190 75 1746 158 21 63 chr5 175871880 175872259 -27213273 + MER47A DNA MER2_type 2 364 -2 755 319 101 5 chr5 175872686 175873113 -27212419 + MLT1K LTR MaLR 114 581 -7 199 281 31 31 chr5 175874972 175875036 -27210496 + L3 LINE CR1 1509 1572 -5 212 281 31 31 chr5 175875984 175876048 -27209484 + MIR SINE MIR 37 100 -162 1870 189 25 6 chr5 175876051 175876406 -27209126 - MLT1A1 LTR MaLR -3 362 1 430 266 65 58 chr5 175877196 175877350 -27208182 - MIR3 SINE MIR -10 198 44 336 353 93 57 chr5 175877357 175877810 -27207722 + L2 LINE L2 2804 3272 0 459 316 80 17 chr5 175877841 175878078 -27207454 + MIR SINE MIR 9 260 -2 783 271 61 95 chr5 175878900 175879471 -27206061 + LTR67 LTR ERVL 2 553 -4 448 307 124 45 chr5 175879561 175879939 -27205593 - L2 LINE L2 0 3313 2906 7230 184 41 21 chr5 175879958 175881585 -27203947 - MER52A LTR ERV1 0 1755 1 188 432 0 0 chr5 175881585 175881666 -27203866 - MIR SINE MIR -171 91 11 235 293 37 49 chr5 175881904 175881986 -27203546 - L2 LINE L2 -58 3214 3134 204 216 0 39 chr5 175882088 175882139 -27203393 - L2 LINE L2 -251 3062 3014 256 283 29 94 chr5 175882148 175882286 -27203246 - MIR3 SINE MIR -71 137 9 570 268 16 44 chr5 175882984 175883167 -27202365 - MIR SINE MIR -33 229 52 1644 148 34 12 chr5 175883286 175883610 -27201922 + L1MA8 LINE L1 5956 6286 -5 2180 126 0 19 chr5 175883618 175883936 -27201596 + AluSx SINE Alu 1 312 0 1993 131 13 17 chr5 175884098 175884396 -27201136 - AluSx SINE Alu -15 297 1 625 305 15 10 chr5 175884597 175884794 -27200738 + MIR SINE MIR 11 208 -54 2162 114 3 7 chr5 175884823 175885145 -27200387 + AluSg SINE Alu 1 321 0 2200 180 8 18 chr5 175885194 175885594 -27199938 - MSTD LTR MaLR 0 396 1 258 265 30 18 chr5 175885694 175885905 -27199627 + (TTA)n Simple_repeat Simple_repeat 1 213 0 1005 252 89 87 chr5 175886310 175886534 -27198998 + L1ME LINE L1 21 243 -5827 513 110 0 0 chr5 175886534 175886625 -27198907 + (TATG)n Simple_repeat Simple_repeat 2 92 0 1005 252 89 87 chr5 175886625 175887178 -27198354 + L1ME LINE L1 243 799 -5271 209 352 95 29 chr5 175887241 175887346 -27198186 - MIR SINE MIR -116 146 35 238 297 302 10 chr5 175887360 175887552 -27197980 + MIR SINE MIR 10 257 -5 212 341 0 23 chr5 175887679 175887767 -27197765 - L2 LINE L2 -1 3271 3186 23 0 0 0 chr5 175887797 175887820 -27197712 + AT_rich Low_complexity Low_complexity 1 23 0 632 291 88 33 chr5 175888154 175888460 -27197072 - L3 LINE CR1 -155 1422 1100 335 353 110 0 chr5 175888866 175889002 -27196530 - L2 LINE L2 -1 3271 3121 21 0 0 0 chr5 175889171 175889192 -27196340 + AT_rich Low_complexity Low_complexity 1 21 0 347 326 56 21 chr5 175889572 175889716 -27195816 + L3 LINE CR1 1329 1477 -100 626 310 142 38 chr5 175889845 175890724 -27194808 - L2 LINE L2 -2 3311 2325 619 287 25 13 chr5 175890710 175890941 -27194591 - MIR SINE MIR -13 249 16 * 209 299 124 51 chr5 175891429 175891566 -27193966 - MIR3 SINE MIR -52 156 10 307 280 32 11 chr5 175891684 175891777 -27193755 - MIR SINE MIR -54 208 114 405 0 0 0 chr5 175891809 175891854 -27193678 + (TG)n Simple_repeat Simple_repeat 2 46 0 414 277 57 14 chr5 175892011 175892152 -27193380 + MIR SINE MIR 25 171 -91 365 328 35 18 chr5 175892319 175892490 -27193042 + MIR SINE MIR 12 185 -77 866 181 7 0 chr5 175892654 175892803 -27192729 + AluSg/x SINE Alu 133 282 -28 23 0 0 0 chr5 175892815 175892838 -27192694 + AT_rich Low_complexity Low_complexity 1 23 0 537 337 35 0 chr5 175893881 175894080 -27191452 - MIR SINE MIR -17 245 40 1206 216 12 0 chr5 175894106 175894360 -27191172 + MER58B DNA MER1_type 75 331 -10 335 278 33 26 chr5 175894570 175894721 -27190811 - MLT1K LTR MaLR -17 571 420 306 329 47 13 chr5 175894948 175895097 -27190435 - MLT1K LTR MaLR -333 255 102 1185 263 103 7 chr5 175895733 175896170 -27189362 + L1ME3A LINE L1 5669 6147 -23 222 338 35 75 chr5 175897603 175897831 -27187701 + L2 LINE L2 2862 3080 -192 586 301 13 0 chr5 175897841 175897997 -27187535 + MER58A DNA MER1_type 19 176 -48 303 299 34 34 chr5 175898030 175898147 -27187385 + L2 LINE L2 3137 3253 -19 231 349 72 24 chr5 175898427 175898593 -27186939 - MIR SINE MIR -5 257 84 232 247 37 49 chr5 175899114 175899195 -27186337 + L2 LINE L2 3190 3269 -44 240 163 0 0 chr5 175899210 175899253 -27186279 - MLT2C2 LTR ERVL -2 462 420 1635 246 9 60 chr5 175899258 175899787 -27185745 - MLT2B1 LTR ERVL -18 502 1 1187 212 119 47 chr5 175901041 175901470 -27184062 - MLT1C LTR MaLR -2 465 6 394 277 48 43 chr5 175901542 175901730 -27183802 - L2 LINE L2 -185 3128 2940 533 241 96 45 chr5 175901757 175901977 -27183555 + LTR16A LTR ERVL 18 248 -202 * 1490 194 53 66 chr5 175901962 175902399 -27183133 - MLT1D LTR MaLR -74 431 1 611 311 155 0 chr5 175902399 175902650 -27182882 - L2 LINE L2 -1780 1534 1245 739 312 24 12 chr5 175902756 175903003 -27182529 - MIR SINE MIR -11 251 2 536 268 103 42 chr5 175903176 175903389 -27182143 + MIR SINE MIR 34 259 -3 551 249 37 91 chr5 175904264 175904505 -27181027 - MIR SINE MIR -19 243 16 186 219 12 24 chr5 175904635 175904717 -27180815 + CT-rich Low_complexity Low_complexity 5 85 0 539 284 84 28 chr5 175906529 175906744 -27178788 - MIR SINE MIR -33 229 3 464 294 136 27 chr5 175907353 175907683 -27177849 + MARNA DNA Mariner 52 417 -169 592 309 11 17 chr5 175908042 175908274 -27177258 - MIR SINE MIR -10 252 25 24 91 0 0 chr5 175908300 175908366 -27177166 + AT_rich Low_complexity Low_complexity 1 66 0 1863 130 47 0 chr5 175908874 175909151 -27176381 - AluSx SINE Alu -22 290 1 233 286 126 25 chr5 175909187 175909306 -27176226 - MIR SINE MIR -62 146 16 2824 123 7 2 chr5 175910008 175910437 -27175095 + LTR3 LTR ERVK 1 431 -1 431 346 17 6 chr5 175910826 175911005 -27174527 + MIR SINE MIR 48 228 -34 534 250 29 52 chr5 175911084 175911256 -27174276 + MIR SINE MIR 24 191 -71 615 108 0 0 chr5 175911460 175911553 -27173979 + (TG)n Simple_repeat Simple_repeat 2 94 0 1943 155 15 12 chr5 175912904 175913240 -27172292 + MER44D DNA MER2_type 1 607 -2 350 248 103 30 chr5 175913650 175913884 -27171648 - L1MC4a LINE L1 -1913 5895 5645 22 0 0 0 chr5 175914146 175914168 -27171364 + AT_rich Low_complexity Low_complexity 1 22 0 299 332 96 15 chr5 175914311 175914510 -27171022 + MIR SINE MIR 32 246 -16 400 275 118 50 chr5 175915136 175915398 -27170134 - L2 LINE L2 -34 3279 3000 239 221 103 0 chr5 175915462 175915530 -27170002 - MIR SINE MIR -88 174 100 505 325 96 45 chr5 175916877 175917366 -27168166 - L1ME4a LINE L1 -5 6116 5603 370 306 68 25 chr5 175917396 175917631 -27167901 - L1ME4a LINE L1 -2267 5541 5297 359 344 38 8 chr5 175918404 175918535 -27166997 + MIR SINE MIR 29 163 -99 265 282 186 16 chr5 175918912 175919036 -27166496 - MIR3 SINE MIR -7 201 57 186 233 0 0 chr5 175920071 175920131 -27165401 + (CAT)n Simple_repeat Simple_repeat 3 62 0 849 159 203 6 chr5 175920202 175920384 -27165148 + MER20 DNA MER1_type 1 218 -1 260 123 49 49 chr5 175920427 175920508 -27165024 - L1M4 LINE L1 -2190 3956 3876 2493 89 0 0 chr5 175920521 175920834 -27164698 - AluSq SINE Alu 0 313 1 432 346 0 0 chr5 175921404 175921534 -27163998 - MIR SINE MIR -24 238 109 210 250 128 47 chr5 175921949 175922097 -27163435 + L2 LINE L2 2858 3017 -255 411 280 34 0 chr5 175922307 175922425 -27163107 + L2 LINE L2 3192 3313 0 1596 181 10 10 chr5 175922718 175923011 -27162521 + AluSc SINE Alu 1 293 -16 21 57 0 0 chr5 175923143 175923178 -27162354 + AT_rich Low_complexity Low_complexity 1 35 0 277 296 43 43 chr5 175923275 175923390 -27162142 - MER5A DNA MER1_type -5 184 70 274 54 27 0 chr5 175924369 175924406 -27161126 + L2 LINE L2 3217 3254 -18 887 266 25 7 chr5 175924480 175924853 -27160679 - LTR16A LTR ERVL -14 436 19 883 235 48 61 chr5 175924915 175925294 -27160238 + MLT1A2 LTR MaLR 1 374 0 2415 76 0 10 chr5 175925355 175925689 -27159843 + AluY SINE Alu 1 331 0 293 288 144 0 chr5 175928249 175928360 -27157172 - MIR SINE MIR -89 173 47 2014 129 0 4 chr5 175928372 175928651 -27156881 - AluSx SINE Alu -34 278 1 24 0 0 0 chr5 175928766 175928790 -27156742 + AT_rich Low_complexity Low_complexity 1 24 0 266 328 101 66 chr5 175929668 175930076 -27155456 + L2 LINE L2 2892 3313 0 943 217 174 158 chr5 175930137 175930631 -27154901 - MLT1E2 LTR MaLR -3 623 1 203 262 98 0 chr5 175931888 175931949 -27153583 - L2 LINE L2 -12 3301 3235 278 349 54 0 chr5 175932053 175932202 -27153330 + L3b LINE CR1 1241 1397 -186 401 353 69 39 chr5 175932267 175932675 -27152857 + L2 LINE L2 2400 2819 -495 249 284 75 60 chr5 175932739 175932873 -27152659 + L2 LINE L2 2917 3052 -220 576 287 83 9 chr5 175932963 175933179 -27152353 - MIR SINE MIR 0 262 31 239 315 38 49 chr5 175933262 175933446 -27152086 - MLT1L LTR MaLR -224 391 210 384 292 66 15 chr5 175933778 175933915 -27151617 + MIR SINE MIR 94 237 -25 982 241 153 10 chr5 175934220 175934515 -27151017 - MER58B DNA MER1_type 0 341 5 480 295 154 9 chr5 175935737 175935964 -27149568 - MIR SINE MIR 0 262 3 582 216 142 19 chr5 175935991 175936153 -27149379 - MER5A DNA MER1_type 0 189 8 668 200 177 0 chr5 175937686 175937861 -27147671 - MLT1G1 LTR MaLR -6 584 379 1799 231 66 23 chr5 175937861 175938375 -27147157 + MER74A LTR ERVL 1 536 -22 2068 134 3 16 chr5 175938389 175938696 -27146836 - AluSx SINE Alu -9 303 1 1548 231 63 6 chr5 175938731 175939095 -27146437 - MLT1G1 LTR MaLR -207 388 4 518 289 75 0 chr5 175939267 175939440 -27146092 + MIR SINE MIR 77 262 0 194 351 0 39 chr5 175939610 175939687 -27145845 + MIR SINE MIR 40 113 -149 262 290 160 0 chr5 175939972 175940072 -27145460 - MIR SINE MIR -142 120 5 274 287 62 33 chr5 175940353 175940597 -27144935 + L1ME2 LINE L1 1869 2119 -4277 764 256 129 25 chr5 175940602 175941036 -27144496 + L1ME2 LINE L1 5744 6222 -11 227 48 0 71 chr5 175941038 175941080 -27144452 + (A)n Simple_repeat Simple_repeat 1 39 0 1133 139 5 45 chr5 175941163 175941386 -27144146 - L1PA15 LINE L1 -2 6163 5950 2195 134 0 3 chr5 175941547 175941860 -27143672 + AluSx SINE Alu 1 312 0 627 130 0 0 chr5 175941907 175942007 -27143525 + (TAGA)n Simple_repeat Simple_repeat 3 102 0 367 269 76 0 chr5 175942196 175942315 -27143217 - MIR SINE MIR -15 247 120 493 252 0 59 chr5 175944528 175944647 -27140885 - L2 LINE L2 -1 3312 3201 1119 301 121 42 chr5 175944907 175945509 -27140023 - MER115 DNA AcHobo 0 693 44 246 194 32 32 chr5 175945774 175945836 -27139696 - MER5A DNA MER1_type 0 189 128 640 186 25 0 chr5 175945876 175945994 -27139538 - MER5A DNA MER1_type -68 121 1 200 307 53 40 chr5 175946947 175947022 -27138510 - MER5A DNA MER1_type -110 79 4 1979 177 8 25 chr5 175947101 175947497 -27138035 + MLT1B LTR MaLR 2 390 0 370 344 50 12 chr5 175947716 175947876 -27137656 - MER5A DNA MER1_type -14 175 10 208 354 110 0 chr5 175947998 175948080 -27137452 + L2 LINE L2 2720 2810 -504 454 310 39 44 chr5 175948208 175948411 -27137121 + L2 LINE L2 3111 3312 -1 372 351 101 13 chr5 175949448 175949676 -27135856 - MIR SINE MIR -14 248 1 180 288 61 30 chr5 175949852 175949918 -27135614 + L2 LINE L2 2864 2931 -341 2352 64 0 0 chr5 175950476 175950801 -27134731 - AluY SINE Alu 0 325 1 533 295 72 38 chr5 175950959 175951196 -27134336 + MIR SINE MIR 18 262 0 894 238 13 50 chr5 175952944 175953137 -27132395 + LTR37B LTR ERV1 176 356 -112 1577 229 43 43 chr5 175953137 175953420 -27132112 - MLT1C LTR MaLR 0 467 182 1673 215 0 0 chr5 175953420 175953727 -27131805 - AluJo SINE Alu -5 307 1 1577 229 43 43 chr5 175953727 175953910 -27131622 - MLT1C LTR MaLR -284 183 1 894 238 13 50 chr5 175953910 175954019 -27131513 + LTR37B LTR ERV1 356 467 -1 582 336 0 59 chr5 175955690 175955928 -27129604 - MIR SINE MIR -37 225 2 345 227 0 23 chr5 175956284 175956372 -27129160 - MER46C DNA MER2_type -8 330 245 1729 149 7 3 chr5 175956501 175956789 -27128743 - AluSg1 SINE Alu -20 289 1 2276 89 21 0 chr5 175957666 175957957 -27127575 - AluY SINE Alu -14 297 1 210 116 47 0 chr5 175957992 175958035 -27127497 + (TA)n Simple_repeat Simple_repeat 1 45 0 2293 100 3 0 chr5 175958076 175958376 -27127156 - AluSx SINE Alu -11 301 1 575 323 72 45 chr5 175958401 175958776 -27126756 - L1ME LINE L1 -463 5658 5274 2794 255 98 54 chr5 175959358 175960726 -27124806 - L1MC4 LINE L1 -1 8041 6614 228 35 0 0 chr5 175960841 175960870 -27124662 + (CA)n Simple_repeat Simple_repeat 2 30 0 198 141 31 16 chr5 175960906 175960970 -27124562 + (TA)n Simple_repeat Simple_repeat 2 66 0 2671 252 92 49 chr5 175961112 175962241 -27123291 - L1MC4a LINE L1 -1291 6517 5340 310 273 43 74 chr5 175962304 175962535 -27122997 - L1MC4a LINE L1 -914 5232 5009 * 318 267 67 28 chr5 175962521 175962701 -27122831 - L1MC4a LINE L1 -1653 4493 4307 1777 165 14 0 chr5 175962929 175963266 -27122266 + AluJo SINE Alu 1 341 0 189 337 79 44 chr5 175964848 175965100 -27120432 + L2 LINE L2 2715 2975 -339 308 277 63 78 chr5 175965466 175965672 -27119860 - L1MC4 LINE L1 -1980 5828 5626 267 239 98 22 chr5 175965800 175965892 -27119640 - MIR SINE MIR -35 227 129 241 314 0 0 chr5 175966309 175966379 -27119153 - L2 LINE L2 -2 3311 3242 954 199 0 0 chr5 175966421 175966582 -27118950 + AluJb SINE Alu 133 293 -19 1649 141 68 20 chr5 175966917 175967271 -27118261 - L1MB8 LINE L1 -5 6173 5803 21 36 0 0 chr5 175967756 175967784 -27117748 + AT_rich Low_complexity Low_complexity 1 28 0 584 304 39 46 chr5 175968040 175968300 -27117232 + MIR SINE MIR 3 260 -2 184 290 97 0 chr5 175968451 175968513 -27117019 + L2 LINE L2 3190 3257 -56 2095 100 45 3 chr5 175969739 175970028 -27115504 + AluSx SINE Alu 1 301 -11 364 344 116 28 chr5 175970091 175970478 -27115054 - MLT1J2 LTR MaLR -28 422 2 825 241 68 10 chr5 175971865 175972072 -27113460 - MER58A DNA MER1_type 0 224 6 26 30 0 0 chr5 175972818 175972851 -27112681 + AT_rich Low_complexity Low_complexity 1 33 0 540 234 73 147 chr5 175972886 175973172 -27112360 - MLT1A1 LTR MaLR -100 265 1 573 276 26 60 chr5 175973389 175973657 -27111875 + MIR SINE MIR 3 261 -1 260 326 126 0 chr5 175974463 175974558 -27110974 - L2 LINE L2 0 3272 3166 1719 190 118 19 chr5 175975252 175975667 -27109865 + MLT1C LTR MaLR 8 463 -4 917 212 56 0 chr5 175976169 175976348 -27109184 - MER5A DNA MER1_type 0 189 1 459 320 162 5 chr5 175976706 175976928 -27108604 - MIR SINE MIR 0 262 6 225 319 14 43 chr5 175977014 175977155 -27108377 - L1ME4a LINE L1 -47 6074 5938 294 313 22 0 chr5 175977203 175977337 -27108195 - L1ME4a LINE L1 -244 5877 5741 2286 83 37 0 chr5 175977488 175977788 -27107744 + AluY SINE Alu 1 311 0 1684 182 0 24 chr5 175977844 175978141 -27107391 + AluJo SINE Alu 6 295 -17 1664 177 0 0 chr5 175978296 175978579 -27106953 - L1PB4 LINE L1 -7 6149 5867 303 333 35 0 chr5 175978639 175978726 -27106806 - MIR3 SINE MIR -26 182 93 439 175 9 53 chr5 175978764 175978878 -27106654 - L2 LINE L2 -2 3311 3203 406 296 0 28 chr5 175979648 175979756 -27105776 + MER81 DNA DNA 5 109 -5 444 290 161 0 chr5 175979785 175979909 -27105623 + L2 LINE L2 3126 3269 -3 217 282 128 0 chr5 175979911 175979989 -27105543 + MIR SINE MIR 164 251 -11 1622 186 10 22 chr5 175980378 175980690 -27104842 + AluJo SINE Alu 1 308 -4 209 345 115 14 chr5 175981056 175981195 -27104337 - MIR SINE MIR -52 210 58 920 213 36 36 chr5 175981195 175981416 -27104116 - LTR39 LTR ERV1 0 783 563 * 1983 178 16 60 chr5 175981415 175981848 -27103684 - LTR39 LTR ERV1 -365 418 5 350 320 32 24 chr5 175981915 175982040 -27103492 - L2 LINE L2 -2 3270 3145 255 275 47 21 chr5 175982293 175982413 -27103119 - L2 LINE L2 -285 2987 2867 2014 195 40 16 chr5 175983217 175983642 -27101890 + L1MD3 LINE L1 7550 7984 -11 229 299 143 32 chr5 175983947 175984101 -27101431 + L2 LINE L2 2769 2939 -375 221 319 42 0 chr5 175984544 175984616 -27100916 + L2 LINE L2 3234 3308 -5 735 207 59 12 chr5 175985315 175985484 -27100048 + MER69A DNA AcHobo 1 177 0 217 208 94 0 chr5 175986616 175986669 -27098863 - L2 LINE L2 -2 3311 3254 220 344 22 66 chr5 175986922 175987105 -27098427 - L2 LINE L2 -242 3030 2856 411 248 32 24 chr5 175987330 175987455 -27098077 - MIR SINE MIR -120 142 17 3644 129 58 71 chr5 175987461 175988197 -27097335 - LTR8A LTR ERV1 0 727 1 209 345 73 41 chr5 175989131 175989351 -27096181 - L2 LINE L2 -188 3084 2858 249 208 208 40 chr5 175989775 175989924 -27095608 - L1ME4a LINE L1 -12 6109 5936 1196 217 89 52 chr5 175989948 175990330 -27095202 - MSTD LTR MaLR 0 396 1 1313 218 8 80 chr5 175990589 175990975 -27094557 - MLT1A2 LTR MaLR -16 358 1 23 0 0 0 chr5 175991034 175991057 -27094475 + AT_rich Low_complexity Low_complexity 1 23 0 8543 160 14 12 chr5 175991411 175992868 -27092664 + Tigger1 DNA MER2_type 1 1460 -958 7709 38 1 0 chr5 175992877 175994583 -27090949 - L1PA4 LINE L1 -1 6154 4447 473 60 15 0 chr5 175994583 175994650 -27090882 + L1P LINE L1 1988 2055 -4091 6056 136 17 4 chr5 175994650 175995605 -27089927 + Tigger1 DNA MER2_type 1451 2417 -1 2059 205 114 0 chr5 175995649 175996098 -27089434 - MLT1D LTR MaLR -5 500 1 1911 127 60 27 chr5 175996989 175997321 -27088211 - MER61A LTR ERV1 0 343 1 2213 269 61 26 chr5 175997702 175998309 -27087223 - MER45C DNA AcHobo 0 953 326 1330 263 53 6 chr5 175998367 175998687 -27086845 - MER45C DNA AcHobo -617 336 2 1695 197 37 6 chr5 175998778 175999129 -27086403 - MLT1A1 LTR MaLR -3 362 1 219 304 0 0 chr5 175999142 175999198 -27086334 - L2 LINE L2 -992 2322 2267 2594 49 0 0 chr5 175999328 175999636 -27085896 - AluY SINE Alu -3 308 1 207 162 0 0 chr5 176000244 176000281 -27085251 + T-rich Low_complexity Low_complexity 1 37 0 212 244 0 0 chr5 176000747 176000792 -27084740 + L2 LINE L2 3215 3259 -13 2820 168 58 81 chr5 176001187 176001879 -27083653 + LTR8 LTR ERV1 16 691 0 302 322 0 0 chr5 176002135 176002225 -27083307 + L1ME4a LINE L1 5793 5882 -239 515 247 32 19 chr5 176002255 176002413 -27083119 + L1ME4a LINE L1 5598 5757 -2051 1497 229 65 82 chr5 176002637 176003431 -27082101 + L1MC5 LINE L1 6741 7521 -440 454 219 189 55 chr5 176003437 176003601 -27081931 - MER5A DNA MER1_type 0 189 4 1081 257 25 27 chr5 176003601 176004006 -27081526 + L1MC5 LINE L1 7512 7915 -46 315 190 233 43 chr5 176004008 176004171 -27081361 + L1ME4a LINE L1 5928 6121 0 374 324 24 29 chr5 176004619 176004789 -27080743 + MIR SINE MIR 6 174 -88 197 316 77 26 chr5 176005273 176005390 -27080142 - L2 LINE L2 -480 2834 2712 22 94 0 0 chr5 176005821 176005885 -27079647 + AT_rich Low_complexity Low_complexity 1 64 0 28749 29 16 1 chr5 176006983 176013018 -27072514 - L1HS LINE L1 0 6155 1 332 22 0 22 chr5 176013151 176013197 -27072335 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 32904 37 0 1 chr5 176013197 176018166 -27067366 - L1PA3 LINE L1 -24 6131 1167 1636 194 0 17 chr5 176018342 176018630 -27066902 + AluJb SINE Alu 16 298 -14 4276 141 36 30 chr5 176019364 176019491 -27066041 - Ricksha DNA DNA -7 3239 3114 1742 140 8 0 chr5 176019491 176019748 -27065784 + AluSg SINE Alu 39 297 -13 4276 141 36 30 chr5 176019748 176020498 -27065034 - Ricksha DNA DNA -132 3114 2356 338 67 0 0 chr5 176020496 176020541 -27064991 - Ricksha DNA DNA -3158 88 44 * 231 232 0 18 chr5 176021319 176021375 -27064157 + T-rich Low_complexity Low_complexity 4 58 0 199 362 0 0 chr5 176022274 176022343 -27063189 + L2 LINE L2 2987 3055 -217 279 125 62 0 chr5 176023218 176023282 -27062250 - L1MD2 LINE L1 0 6359 6292 2094 128 10 0 chr5 176023284 176023573 -27061959 + AluSx SINE Alu 2 293 -19 498 109 0 0 chr5 176023573 176023665 -27061867 + (TA)n Simple_repeat Simple_repeat 1 92 0 227 276 23 0 chr5 176023672 176023759 -27061773 - L1MC4 LINE L1 -1340 6702 6614 * 236 233 27 0 chr5 176023687 176023760 -27061772 + L1MC4 LINE L1 6618 6692 -1350 * 4058 238 33 76 chr5 176023755 176024014 -27061518 - L1MD2 LINE L1 -63 6556 6287 1454 163 165 65 chr5 176024014 176024401 -27061131 - MSTB LTR MaLR 0 426 1 8368 191 26 4 chr5 176024401 176026015 -27059517 - MSTB-int LTR MaLR 0 1651 2 2108 185 11 28 chr5 176026016 176026449 -27059083 - MSTB LTR MaLR 0 426 1 1685 156 20 20 chr5 176026450 176026745 -27058787 - AluJo SINE Alu -17 295 1 4058 238 33 76 chr5 176026745 176026782 -27058750 - L1MD2 LINE L1 -331 6288 6251 1720 186 81 97 chr5 176026782 176027433 -27058099 - LTR48B LTR ERV1 0 644 4 4058 238 33 76 chr5 176027433 176028339 -27057193 - L1MD2 LINE L1 -368 6251 5307 2314 104 16 0 chr5 176028339 176028646 -27056886 - AluSp SINE Alu -1 312 1 4058 238 33 76 chr5 176028646 176028843 -27056689 - L1MD2 LINE L1 -1312 5307 5103 230 0 33 0 chr5 176028843 176028873 -27056659 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4058 238 33 76 chr5 176028873 176029498 -27056034 - L1MD2 LINE L1 -1516 5103 4452 522 169 0 0 chr5 176029498 176029587 -27055945 - 5S rRNA rRNA -31 90 2 4058 238 33 76 chr5 176029587 176030216 -27055316 - L1MD2 LINE L1 -2167 4452 3797 207 0 0 0 chr5 176030216 176030239 -27055293 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4058 238 33 76 chr5 176030239 176030278 -27055254 - L1MD2 LINE L1 -2822 3797 3900 2224 146 69 17 chr5 176030278 176030683 -27054849 + MSTB LTR MaLR 1 426 0 4058 238 33 76 chr5 176030683 176030800 -27054732 - L1MD2 LINE L1 -2718 3901 3780 301 231 15 71 chr5 176030813 176030969 -27054563 + L1MB8 LINE L1 5981 6137 -47 452 264 94 16 chr5 176030980 176031234 -27054298 - L1MD2 LINE L1 -4060 2346 2073 331 311 42 0 chr5 176031238 176031357 -27054175 - L1MD2 LINE L1 -4373 2033 1910 746 243 78 57 chr5 176031378 176031901 -27053631 - LTR38 LTR ERV1 -20 590 1 1505 335 38 35 chr5 176031953 176032408 -27053124 - LTR38-int LTR ERV1 -87 7035 6583 2381 95 0 3 chr5 176032408 176032713 -27052819 + AluSq SINE Alu 1 304 -9 1505 335 38 35 chr5 176032713 176033531 -27052001 - LTR38-int LTR ERV1 -539 6583 5730 988 222 42 0 chr5 176033542 176033722 -27051810 - AluJo SINE Alu 0 309 118 207 69 0 0 chr5 176033722 176033751 -27051781 + (TTA)n Simple_repeat Simple_repeat 2 30 0 988 222 42 0 chr5 176033751 176033786 -27051746 - AluJo SINE Alu -191 118 86 1589 347 46 49 chr5 176033944 176035314 -27050218 - LTR38-int LTR ERV1 -1663 5459 4099 4628 159 51 59 chr5 176035314 176036394 -27049138 - MER11C LTR ERVK 0 1071 1 1589 347 46 49 chr5 176036394 176037656 -27047876 - LTR38-int LTR ERV1 -3023 4099 2835 290 359 19 0 chr5 176037706 176037862 -27047670 - LTR38-int LTR ERV1 -4756 2366 2208 1829 308 50 48 chr5 176037975 176039136 -27046396 - LTR38-int LTR ERV1 -5035 2087 925 2199 107 24 0 chr5 176039772 176040062 -27045470 + AluSc SINE Alu 1 297 -12 771 289 96 46 chr5 176040909 176041324 -27044208 - LTR38-int LTR ERV1 -1348 438 3 708 259 97 49 chr5 176041339 176041771 -27043761 - LTR38 LTR ERV1 -11 545 93 3229 219 44 30 chr5 176041859 176043119 -27042413 - L1MD2 LINE L1 -4483 1923 654 189 121 0 0 chr5 176043645 176043678 -27041854 + (TA)n Simple_repeat Simple_repeat 1 33 0 225 0 0 0 chr5 176043691 176043716 -27041816 + (CA)n Simple_repeat Simple_repeat 2 26 0 1259 283 63 34 chr5 176043848 176044342 -27041190 - L1MD2 LINE L1 -5893 516 9 2046 154 0 0 chr5 176044461 176044766 -27040766 - AluSx SINE Alu -7 305 1 25 0 0 0 chr5 176044834 176044859 -27040673 + AT_rich Low_complexity Low_complexity 1 25 0 385 143 57 0 chr5 176044859 176044929 -27040603 + MLT1E LTR MaLR 520 593 0 1074 198 65 53 chr5 176045936 176046259 -27039273 + MLT1A1 LTR MaLR 13 339 -26 360 0 0 0 chr5 176046954 176046994 -27038538 + (TG)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr5 176046993 176047021 -27038511 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 208 188 31 0 chr5 176047896 176047960 -27037572 + (CATA)n Simple_repeat Simple_repeat 3 68 0 296 262 155 43 chr5 176049772 176049959 -27035573 + MIR SINE MIR 1 208 -54 1777 57 4 0 chr5 176049980 176050209 -27035323 + L1PA5 LINE L1 5923 6152 -2 2384 101 0 0 chr5 176050883 176051191 -27034341 + AluSg1 SINE Alu 1 308 -1 31 26 0 0 chr5 176053258 176053296 -27032236 + AT_rich Low_complexity Low_complexity 1 38 0 357 265 68 15 chr5 176053409 176053541 -27031991 + MIR SINE MIR 66 204 -58 333 272 0 0 chr5 176054061 176054142 -27031390 + MER63 DNA MER1_type 672 752 -310 290 224 75 0 chr5 176054133 176054200 -27031332 + MER63 DNA MER1_type 965 1036 -26 * 467 285 198 6 chr5 176055160 176055332 -27030200 + MIR SINE MIR 2 206 -56 684 348 32 20 chr5 176056271 176056619 -27028913 - L2 LINE L2 -376 2938 2587 2161 111 0 4 chr5 176056831 176057110 -27028422 - AluSx SINE Alu -13 299 22 262 287 118 45 chr5 176057687 176057830 -27027702 - MIR SINE MIR -59 149 26 410 280 68 0 chr5 176058392 176058510 -27027022 - L2 LINE L2 0 3313 3188 3607 169 39 22 chr5 176058626 176059389 -27026143 + L1MC1 LINE L1 5558 6333 0 239 325 94 31 chr5 176059550 176059710 -27025822 + MIR3 SINE MIR 14 183 -25 26 74 0 0 chr5 176059999 176060053 -27025479 + AT_rich Low_complexity Low_complexity 1 54 0 1578 240 102 58 chr5 176060377 176061382 -27024150 - L1MC5 LINE L1 -30 7931 6883 305 323 89 13 chr5 176061382 176061540 -27023992 - L1MC5 LINE L1 -2384 5424 5255 567 247 141 22 chr5 176061675 176061902 -27023630 + MIR SINE MIR 3 256 -6 194 315 11 45 chr5 176062292 176062381 -27023151 - MIR SINE MIR -64 198 113 567 243 173 5 chr5 176062644 176062829 -27022703 - MIR SINE MIR -36 226 11 386 281 70 9 chr5 176064373 176064487 -27021045 + MIR SINE MIR 31 151 -111 304 390 0 0 chr5 176065517 176065640 -27019892 + L2 LINE L2 3188 3310 -3 189 333 0 13 chr5 176066132 176066210 -27019322 + L3 LINE CR1 1119 1195 -382 526 322 87 17 chr5 176066316 176066546 -27018986 - MIR SINE MIR -14 248 3 186 353 0 78 chr5 176066673 176066789 -27018743 - MIR SINE MIR -81 127 21 354 273 83 23 chr5 176067140 176067272 -27018260 + MIR SINE MIR 2 141 -121 * 1666 293 115 36 chr5 176067253 176068496 -27017036 - L2 LINE L2 0 3313 1986 335 351 23 0 chr5 176068584 176068715 -27016817 + MIR3 SINE MIR 64 197 -11 180 158 0 0 chr5 176069678 176069716 -27015816 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 251 300 0 0 chr5 176069735 176069795 -27015737 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 224 291 39 39 chr5 176069848 176069951 -27015581 - MIR SINE MIR -6 256 154 477 0 0 0 chr5 176070891 176070944 -27014588 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1949 126 3 11 chr5 176070947 176071232 -27014300 - AluSq SINE Alu -30 283 1 606 237 26 79 chr5 176071870 176072060 -27013472 + MER5A DNA MER1_type 10 189 0 226 231 0 46 chr5 176072154 176072219 -27013313 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 21 36 0 0 chr5 176072293 176072321 -27013211 + AT_rich Low_complexity Low_complexity 1 28 0 1377 225 3 45 chr5 176072375 176072686 -27012846 + AluJo SINE Alu 3 300 -2 871 265 28 59 chr5 176072687 176073148 -27012384 + L1ME2 LINE L1 4802 5248 -898 2284 224 94 13 chr5 176073224 176073570 -27011962 + L1ME2 LINE L1 5431 5747 -417 1551 159 81 26 chr5 176073570 176073915 -27011617 + THE1B LTR MaLR 1 364 0 2284 224 94 13 chr5 176073915 176074245 -27011287 + L1ME2 LINE L1 5747 6162 -2 712 293 70 9 chr5 176074272 176074501 -27011031 - MIR SINE MIR -17 245 3 6118 102 34 25 chr5 176074532 176075646 -27009886 - L1PA14 LINE L1 0 6161 5047 2194 121 0 10 chr5 176075766 176076080 -27009452 - AluSq SINE Alu -2 311 1 571 326 36 9 chr5 176076303 176076524 -27009008 + MIR SINE MIR 28 254 -8 239 70 0 23 chr5 176077284 176077327 -27008205 + (TG)n Simple_repeat Simple_repeat 2 43 0 2659 42 0 0 chr5 176077510 176077819 -27007713 - AluY SINE Alu -2 309 1 228 290 178 0 chr5 176078069 176078176 -27007356 + MIR3 SINE MIR 37 162 -46 315 268 28 0 chr5 176078505 176078576 -27006956 - MIR SINE MIR -113 149 77 333 0 0 0 chr5 176078966 176079003 -27006529 + (CA)n Simple_repeat Simple_repeat 2 38 0 186 280 20 60 chr5 176079259 176079359 -27006173 + MIR SINE MIR 121 216 -46 1964 62 4 4 chr5 176079637 176079893 -27005639 + L1PA5 LINE L1 5892 6147 -7 325 349 82 7 chr5 176080024 176080170 -27005362 + L2 LINE L2 3116 3272 0 377 215 259 13 chr5 176080435 176080593 -27004939 - MER117 DNA MER1_type 0 197 1 1412 224 7 3 chr5 176081147 176081442 -27004090 - AluJo SINE Alu -4 308 13 181 314 39 0 chr5 176082332 176082383 -27003149 - L2 LINE L2 -95 3177 3125 248 111 0 0 chr5 176082796 176082832 -27002700 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 253 286 42 8 chr5 176082942 176082970 -27002562 - L1MA10 LINE L1 0 6334 6307 2491 233 60 11 chr5 176082970 176083159 -27002373 - L1ME2 LINE L1 -20 6144 5966 2108 114 4 4 chr5 176083159 176083471 -27002061 + AluSx SINE Alu 1 312 0 2491 233 60 11 chr5 176083471 176084389 -27001143 - L1ME2 LINE L1 -198 5966 4977 997 219 21 99 chr5 176084813 176085196 -27000336 + MLT1A1 LTR MaLR 1 353 -12 4743 239 42 39 chr5 176085207 176086604 -26998928 + MLT1A1-int LTR MaLR 1 1401 -334 254 346 8 15 chr5 176086862 176086995 -26998537 + HAL1 LINE L1 1450 1581 -926 2514 119 62 2 chr5 176086995 176087399 -26998133 + MSTA LTR MaLR 1 428 0 8482 179 26 11 chr5 176087399 176088777 -26996755 + MSTA-int LTR MaLR 1 1408 -243 7431 34 20 7 chr5 176088777 176089824 -26995708 - L1PA4 LINE L1 0 6155 5104 8482 179 26 11 chr5 176089824 176090072 -26995460 + MSTA-int LTR MaLR 1408 1651 0 2740 143 12 0 chr5 176090072 176090491 -26995041 + MSTA LTR MaLR 1 424 -4 25 31 0 0 chr5 176090597 176090629 -26994903 + AT_rich Low_complexity Low_complexity 1 32 0 2438 77 0 0 chr5 176090970 176091270 -26994262 + AluY SINE Alu 1 300 -11 809 252 97 24 chr5 176091994 176092418 -26993114 - LTR37B LTR ERV1 0 468 14 24 0 0 0 chr5 176093583 176093607 -26991925 + AT_rich Low_complexity Low_complexity 1 24 0 1038 225 38 32 chr5 176093622 176093938 -26991594 - PABL_B LTR ERV1 -1 666 349 332 305 40 23 chr5 176093992 176094169 -26991363 - PABL_B LTR ERV1 -487 180 1 1534 113 13 0 chr5 176094169 176094408 -26991124 - L1MA2 LINE L1 -14 6290 6049 587 348 86 49 chr5 176094992 176095627 -26989905 + L2 LINE L2 2621 3262 -10 22 0 0 0 chr5 176096519 176096541 -26988991 + AT_rich Low_complexity Low_complexity 1 22 0 617 142 59 156 chr5 176097454 176097811 -26987721 + Charlie5 DNA MER1_type 7 2624 0 397 281 60 12 chr5 176098766 176098933 -26986599 + MER5B DNA MER1_type 4 178 0 340 268 134 7 chr5 176099599 176099741 -26985791 - MIR SINE MIR -2 260 101 243 241 17 0 chr5 176099990 176100048 -26985484 - Charlie8 DNA MER1_type -1009 1408 1350 249 108 0 0 chr5 176100229 176100266 -26985266 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 431 270 118 15 chr5 176100324 176100528 -26985004 - Charlie8 DNA MER1_type -2152 265 41 403 311 68 11 chr5 176101153 176101330 -26984202 - MIR3 SINE MIR 0 208 22 2019 140 18 0 chr5 176101383 176101668 -26983864 + AluSx SINE Alu 1 290 -22 337 300 12 0 chr5 176101700 176101780 -26983752 + MER5A DNA MER1_type 83 163 -26 403 255 87 43 chr5 176102247 176102455 -26983077 - MIR SINE MIR -13 249 33 195 330 0 55 chr5 176103211 176103302 -26982230 + MIR3 SINE MIR 112 197 -11 543 305 30 10 chr5 176103546 176103746 -26981786 - LTR33 LTR ERVL -308 213 10 207 297 194 48 chr5 176104107 176104272 -26981260 + MIR SINE MIR 74 262 0 872 223 21 0 chr5 176105895 176106083 -26979449 - MER58A DNA MER1_type -1 223 32 401 316 151 13 chr5 176106435 176106660 -26978872 - MIR SINE MIR 0 262 7 2609 46 0 10 chr5 176108775 176109082 -26976450 + AluY SINE Alu 1 304 -7 370 281 39 8 chr5 176109965 176110093 -26975439 + MIR SINE MIR 118 249 -13 2261 91 0 13 chr5 176111358 176111656 -26973876 - AluY SINE Alu -17 294 1 335 260 39 116 chr5 176112113 176112475 -26973057 + L2 LINE L2 2953 3286 -27 2078 150 62 91 chr5 176112497 176112936 -26972596 + MSTB LTR MaLR 1 426 0 392 281 144 0 chr5 176113018 176113164 -26972368 + MIR SINE MIR 70 236 -26 996 161 25 0 chr5 176113423 176113585 -26971947 + AluJo SINE Alu 91 256 -56 200 324 48 19 chr5 176113690 176113795 -26971737 - MIR SINE MIR -61 201 94 239 235 0 20 chr5 176113796 176113847 -26971685 - L2 LINE L2 -4 3268 3219 261 266 37 55 chr5 176114427 176114536 -26970996 + MIR SINE MIR 71 177 -85 601 289 90 25 chr5 176114537 176115026 -26970506 - L2 LINE L2 -73 3240 2710 937 183 18 73 chr5 176116504 176116778 -26968754 + L1MD3 LINE L1 7729 7987 -8 292 311 22 0 chr5 176116944 176117034 -26968498 - MIR SINE MIR -85 177 86 2219 112 3 3 chr5 176117037 176117350 -26968182 + AluSq SINE Alu 1 313 0 488 321 36 18 chr5 176117433 176117601 -26967931 + MIR3 SINE MIR 35 205 -3 28 29 0 0 chr5 176117822 176117857 -26967675 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 176118151 176118180 -26967352 + AT_rich Low_complexity Low_complexity 1 29 0 197 333 36 0 chr5 176118936 176119020 -26966512 + MIR SINE MIR 67 153 -109 388 283 248 15 chr5 176119117 176119516 -26966016 - L2 LINE L2 -18 3295 2804 327 65 0 0 chr5 176121156 176121202 -26964330 + (TG)n Simple_repeat Simple_repeat 1 46 0 2267 105 0 3 chr5 176122031 176122336 -26963196 - AluSc SINE Alu -5 304 1 635 266 36 45 chr5 176122610 176122832 -26962700 - L1ME1 LINE L1 -7 6159 5940 1649 175 21 19 chr5 176122968 176123293 -26962239 - MER47A DNA MER2_type -40 326 1 1646 104 45 0 chr5 176123682 176123902 -26961630 - AluSx SINE Alu -82 230 1 415 296 80 15 chr5 176124355 176124619 -26960913 - L1ME1 LINE L1 -301 5820 5540 2099 130 0 7 chr5 176124657 176124958 -26960574 - AluSx SINE Alu -11 301 3 527 283 68 32 chr5 176125198 176125537 -26959995 + L1M4 LINE L1 3939 4289 -1857 21 71 0 0 chr5 176125561 176125603 -26959929 + AT_rich Low_complexity Low_complexity 1 42 0 1668 186 103 48 chr5 176125603 176126251 -26959281 - LTR48 LTR ERV1 0 787 3 1247 266 27 34 chr5 176126252 176126446 -26959086 + L1M4 LINE L1 4389 4583 -1563 2377 184 24 82 chr5 176126446 176127119 -26958413 - MER92B LTR ERV1 -2 634 1 1247 266 27 34 chr5 176127119 176127346 -26958186 + L1M4 LINE L1 4583 4809 -1337 1799 161 3 20 chr5 176127346 176127650 -26957882 + AluJb SINE Alu 1 299 -13 1247 266 27 34 chr5 176127650 176127705 -26957827 + L1M4 LINE L1 4809 4863 -1283 486 260 47 27 chr5 176127723 176127873 -26957659 + MLT1H LTR MaLR 22 174 -375 1096 128 0 0 chr5 176128034 176128183 -26957349 + AluSq/x SINE Alu 1 149 -163 337 266 31 8 chr5 176128327 176128455 -26957077 + HAL1 LINE L1 2046 2176 -331 1925 153 3 0 chr5 176128456 176128738 -26956794 - AluSx SINE Alu -24 288 6 731 272 38 52 chr5 176128779 176128969 -26956563 + HAL1 LINE L1 2161 2345 -162 2106 155 17 3 chr5 176128969 176129330 -26956202 - MER47A DNA MER2_type 0 366 1 731 272 38 52 chr5 176129330 176129485 -26956047 + HAL1 LINE L1 2345 2501 -6 24 0 0 0 chr5 176129485 176129509 -26956023 + AT_rich Low_complexity Low_complexity 1 24 0 2580 62 0 0 chr5 176130244 176130550 -26954982 - AluY SINE Alu -5 306 1 201 147 0 0 chr5 176130853 176130887 -26954645 + (TA)n Simple_repeat Simple_repeat 2 35 0 324 0 0 0 chr5 176130887 176130923 -26954609 + (GA)n Simple_repeat Simple_repeat 2 37 0 797 220 60 5 chr5 176132515 176132715 -26952817 + MIR SINE MIR 31 241 -21 214 312 35 88 chr5 176132864 176133015 -26952517 - MER5A DNA MER1_type 0 189 46 640 248 89 0 chr5 176133015 176133172 -26952360 + MER96 DNA MER1_type 5 175 0 214 312 35 88 chr5 176133172 176133190 -26952342 - MER5A DNA MER1_type -143 46 29 709 266 34 49 chr5 176133211 176133478 -26952054 - L2 LINE L2 -1 3312 3050 1009 160 132 45 chr5 176133620 176134131 -26951401 + LTR29 LTR ERV1 1 590 -5 231 139 0 23 chr5 176134454 176134497 -26951035 - MIR3 SINE MIR -11 197 156 217 250 0 0 chr5 176135304 176135348 -26950184 + L2 LINE L2 3223 3266 -6 549 292 5 56 chr5 176135591 176135786 -26949746 - L2 LINE L2 -31 3282 3098 231 36 0 0 chr5 176136952 176136980 -26948552 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2730 103 27 20 chr5 176137367 176137813 -26947719 + L1MA4A LINE L1 5852 6300 -3 1206 186 88 0 chr5 176137871 176138134 -26947398 - MER58B DNA MER1_type 0 341 56 27 0 0 0 chr5 176139056 176139083 -26946449 + AT_rich Low_complexity Low_complexity 1 27 0 1829 178 0 9 chr5 176139131 176139446 -26946086 + AluJb SINE Alu 1 312 0 22 0 0 0 chr5 176139684 176139706 -26945826 + AT_rich Low_complexity Low_complexity 1 22 0 391 343 57 20 chr5 176139745 176139990 -26945542 + MIR SINE MIR 5 258 -4 195 100 0 0 chr5 176139995 176140025 -26945507 + (ATG)n Simple_repeat Simple_repeat 3 32 0 311 254 71 32 chr5 176140544 176140670 -26944862 - L1ME4a LINE L1 -45 6076 5946 724 268 154 23 chr5 176140679 176141288 -26944244 + LTR50 LTR ERVL 9 753 -42 1030 290 79 34 chr5 176141322 176141878 -26943654 + Tigger8 DNA MER2_type 6 586 -80 666 284 103 32 chr5 176141950 176142358 -26943174 - L1ME4a LINE L1 -186 5935 5499 22 0 0 0 chr5 176142375 176142397 -26943135 + AT_rich Low_complexity Low_complexity 1 22 0 654 120 34 0 chr5 176142847 176142964 -26942568 - L1MA7 LINE L1 -6 6285 6165 589 322 122 0 chr5 176143399 176143629 -26941903 - MIR SINE MIR 0 262 5 26 0 0 0 chr5 176143884 176143910 -26941622 + AT_rich Low_complexity Low_complexity 1 26 0 650 227 8 0 chr5 176143912 176144031 -26941501 - FLAM_A SINE Alu -13 120 1 199 324 57 38 chr5 176144392 176144497 -26941035 + MIR SINE MIR 144 250 -12 212 266 78 70 chr5 176144720 176144848 -26940684 + L2 LINE L2 3167 3295 -18 2487 237 27 6 chr5 176145042 176145680 -26939852 + L1MB2 LINE L1 4472 5122 -1024 2815 181 37 22 chr5 176145693 176146291 -26939241 + L1MB2 LINE L1 5563 6169 -2 22 35 0 0 chr5 176147791 176147820 -26937712 + AT_rich Low_complexity Low_complexity 1 29 0 236 283 188 0 chr5 176147974 176148112 -26937420 + MER103 DNA DNA 3 166 0 238 305 0 24 chr5 176148571 176148653 -26936879 - L2 LINE L2 0 3272 3193 247 323 40 20 chr5 176148777 176148878 -26936654 - MIR SINE MIR -100 108 5 315 49 0 0 chr5 176149501 176149542 -26935990 + (CA)n Simple_repeat Simple_repeat 2 42 0 430 237 44 18 chr5 176149622 176149736 -26935796 + MIR SINE MIR 79 195 -67 192 285 174 35 chr5 176150852 176150996 -26934536 + MIR3 SINE MIR 33 196 -12 276 88 53 0 chr5 176151002 176151059 -26934473 + (TA)n Simple_repeat Simple_repeat 2 61 0 946 324 47 22 chr5 176151096 176151603 -26933929 - L1MC4a LINE L1 -1846 5962 5443 300 288 24 56 chr5 176152375 176152500 -26933032 + MIR3 SINE MIR 82 202 -6 495 82 82 0 chr5 176152616 176152689 -26932843 + MADE1 DNA Mariner 2 80 0 21 36 0 0 chr5 176152847 176152875 -26932657 + AT_rich Low_complexity Low_complexity 1 28 0 14446 213 79 23 chr5 176153815 176156363 -26929169 + L1MA8 LINE L1 3 2407 -4844 2511 40 0 3 chr5 176156363 176156662 -26928870 + AluY SINE Alu 1 298 -13 14446 213 79 23 chr5 176156662 176160034 -26925498 + L1MA8 LINE L1 2407 6087 -1164 1207 146 43 39 chr5 176160034 176160267 -26925265 + MER46A DNA MER2_type 1 234 -2 14446 213 79 23 chr5 176160267 176161498 -26924034 + L1MA8 LINE L1 6087 7248 -3 2131 110 7 0 chr5 176161834 176162144 -26923388 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 176162748 176162771 -26922761 + AT_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr5 176162835 176162861 -26922671 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1921 112 81 7 chr5 176163031 176163316 -26922216 + AluSx SINE Alu 3 308 -4 188 213 16 66 chr5 176163916 176163977 -26921555 + L2 LINE L2 3185 3242 -30 223 271 0 0 chr5 176164389 176164437 -26921095 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 348 229 107 49 chr5 176165952 176166074 -26919458 + L3 LINE CR1 1293 1421 -156 749 169 17 0 chr5 176166162 176166307 -26919225 - MSTD LTR MaLR -19 438 255 487 323 72 6 chr5 176166425 176166592 -26918940 + MIR SINE MIR 15 192 -70 21 36 0 0 chr5 176166666 176166694 -26918838 + AT_rich Low_complexity Low_complexity 1 28 0 248 288 128 8 chr5 176166804 176166929 -26918603 - MIR SINE MIR -47 215 76 612 323 151 17 chr5 176166967 176167317 -26918215 + L3 LINE CR1 1169 1565 -12 21 57 0 0 chr5 176167781 176167816 -26917716 + AT_rich Low_complexity Low_complexity 1 35 0 561 328 73 17 chr5 176169101 176169333 -26916199 - MIR SINE MIR 0 262 18 226 302 47 23 chr5 176170064 176170150 -26915382 + MIR SINE MIR 92 179 -83 22 0 0 0 chr5 176170864 176170886 -26914646 + AT_rich Low_complexity Low_complexity 1 22 0 5705 153 4 27 chr5 176171130 176172745 -26912787 - L1PB1 LINE L1 -2 6865 5287 * 8273 150 40 21 chr5 176172742 176173902 -26911630 - L1PB1 LINE L1 -3039 3823 2686 2897 105 40 5 chr5 176173902 176174280 -26911252 + MLT2A1 LTR ERVL 1 397 -47 672 102 0 0 chr5 176174280 176174378 -26911154 + (TA)n Simple_repeat Simple_repeat 1 98 0 2897 105 40 5 chr5 176174378 176174428 -26911104 + MLT2A1 LTR ERVL 397 444 0 8273 150 40 21 chr5 176174428 176175661 -26909871 - L1PB1 LINE L1 -4176 2686 1387 818 234 5 0 chr5 176175661 176175849 -26909683 - L1PB1 LINE L1 -6669 194 6 240 324 0 56 chr5 176175888 176175959 -26909573 + L2 LINE L2 3206 3272 0 1929 136 4 4 chr5 176176351 176176666 -26908866 + AluSx SINE Alu 3 317 0 351 311 75 44 chr5 176177401 176177629 -26907903 - L3 LINE CR1 -113 1464 1230 813 200 0 0 chr5 176178834 176178979 -26906553 + FRAM SINE Alu 1 145 -31 1804 170 36 0 chr5 176179047 176179445 -26906087 - L1MC/D LINE L1 -744 5402 5186 23 0 0 0 chr5 176179461 176179484 -26906048 + AT_rich Low_complexity Low_complexity 1 23 0 424 310 91 35 chr5 176179720 176180059 -26905473 + MLT1K LTR MaLR 171 588 0 2447 64 3 0 chr5 176181555 176181851 -26903681 - AluY SINE Alu -14 297 1 1876 165 7 3 chr5 176181941 176182238 -26903294 - AluSx SINE Alu -14 298 1 1901 155 7 0 chr5 176182446 176182750 -26902782 + AluSx SINE Alu 1 306 -6 267 333 20 0 chr5 176182751 176182853 -26902679 + MER94 DNA DNA 31 134 0 296 185 222 0 chr5 176182888 176182969 -26902563 - L2 LINE L2 -3 3269 3171 1667 192 17 0 chr5 176183055 176183346 -26902186 - AluJo SINE Alu -16 296 1 252 271 84 9 chr5 176183458 176183565 -26901967 + LTR16A1 LTR ERVL 30 144 -313 539 198 124 0 chr5 176183653 176183774 -26901758 + MER3 DNA MER1_type 73 208 -1 2308 110 0 0 chr5 176184221 176184529 -26901003 + AluSx SINE Alu 1 308 -4 228 241 145 12 chr5 176184810 176184893 -26900639 + MIR SINE MIR 70 163 -99 347 299 79 12 chr5 176185066 176185230 -26900302 - MER102a DNA MER1_type 0 330 156 22 0 0 0 chr5 176185577 176185599 -26899933 + AT_rich Low_complexity Low_complexity 1 22 0 984 209 19 129 chr5 176185637 176186000 -26899532 + MER5C DNA MER1_type 2 324 0 396 59 0 0 chr5 176186359 176186410 -26899122 + (TG)n Simple_repeat Simple_repeat 1 51 0 249 257 14 54 chr5 176186829 176186903 -26898629 - L2 LINE L2 -1 3271 3201 2492 223 72 14 chr5 176187147 176187798 -26897734 + L1MD2 LINE L1 5671 6359 0 1502 276 57 26 chr5 176188508 176189037 -26896495 + L1MC4a LINE L1 6452 6996 -812 1207 217 148 80 chr5 176189055 176189631 -26895901 + L1MC4 LINE L1 7248 7862 -180 421 183 117 29 chr5 176189953 176190090 -26895442 - L1MC5 LINE L1 -99 7862 7714 588 251 53 15 chr5 176190365 176190579 -26894953 + L1MC5 LINE L1 7022 7242 -738 559 242 95 19 chr5 176190727 176190938 -26894594 + L1MC5 LINE L1 7304 7530 -431 356 335 88 42 chr5 176192511 176192750 -26892782 - L2 LINE L2 -606 2708 2459 203 264 42 14 chr5 176192916 176192988 -26892544 - L2 LINE L2 0 3313 3240 808 336 151 31 chr5 176193273 176193350 -26892182 - L2 LINE L2 -338 2976 2910 2218 104 3 0 chr5 176193350 176193647 -26891885 + AluSc SINE Alu 1 298 -11 808 336 151 31 chr5 176193647 176194549 -26890983 - L2 LINE L2 -404 2910 1879 311 316 90 47 chr5 176194677 176194889 -26890643 + MIR SINE MIR 28 248 -14 239 267 147 43 chr5 176195560 176195676 -26889856 + MIR3 SINE MIR 3 130 -78 2151 96 0 3 chr5 176196633 176196924 -26888608 - AluSc SINE Alu -19 290 1 2159 93 3 35 chr5 176197174 176197486 -26888046 - AluSp SINE Alu -10 303 2 25 0 0 0 chr5 176198917 176198942 -26886590 + AT_rich Low_complexity Low_complexity 1 25 0 437 261 117 98 chr5 176199074 176199349 -26886183 - L1M4 LINE L1 -1854 4292 4024 1118 49 7 0 chr5 176199349 176199491 -26886041 - L1PA4 LINE L1 -13 6142 6000 437 261 117 98 chr5 176199491 176199678 -26885854 - L1M4 LINE L1 -2122 4024 3842 1650 189 7 0 chr5 176199678 176199958 -26885574 + AluJo SINE Alu 1 282 -30 437 261 117 98 chr5 176199958 176200017 -26885515 - L1M4 LINE L1 -2304 3842 3786 1822 157 74 3 chr5 176200017 176200354 -26885178 + MER46B DNA MER2_type 1 236 0 437 261 117 98 chr5 176200354 176201062 -26884470 - L1M4 LINE L1 -2360 3786 3038 185 308 0 0 chr5 176201177 176201229 -26884303 - L2 LINE L2 0 3313 3262 1258 271 86 16 chr5 176201329 176201839 -26883693 - L1ME2 LINE L1 -25 6139 5594 4019 221 129 27 chr5 176201845 176202008 -26883524 + Charlie1a DNA MER1_type 5 150 -2611 1521 178 19 8 chr5 176202008 176202266 -26883266 + AluJo SINE Alu 1 261 -51 243 0 0 0 chr5 176202276 176202303 -26883229 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2369 53 0 0 chr5 176202304 176202605 -26882927 + AluY SINE Alu 1 301 0 4019 221 129 27 chr5 176202605 176202693 -26882839 + Charlie1a DNA MER1_type 158 236 -2525 2069 117 0 0 chr5 176202693 176202998 -26882534 + AluSx SINE Alu 1 305 0 4019 221 129 27 chr5 176202998 176204032 -26881500 + Charlie1a DNA MER1_type 236 1439 -16 897 250 106 5 chr5 176204123 176204226 -26881306 - L1ME2 LINE L1 -568 5596 5505 459 0 0 0 chr5 176204226 176204277 -26881255 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 897 250 106 5 chr5 176204277 176204766 -26880766 - L1ME2 LINE L1 -659 5505 4943 945 215 72 59 chr5 176204772 176205149 -26880383 + MSTC LTR MaLR 1 428 0 2362 250 107 12 chr5 176205196 176206300 -26879232 - L1ME2 LINE L1 -1314 4832 3624 6172 142 68 19 chr5 176206481 176207612 -26877920 + Tigger3b DNA MER2_type 1 1186 -45 5800 130 21 38 chr5 176207662 176208021 -26877511 - L1PB1 LINE L1 0 6151 5787 234 0 0 0 chr5 176208021 176208047 -26877485 + (TG)n Simple_repeat Simple_repeat 2 27 0 5800 130 21 38 chr5 176208047 176209086 -26876446 - L1PB1 LINE L1 -364 5787 4782 253 214 71 0 chr5 176209282 176209352 -26876180 + L1MEd LINE L1 1160 1234 -4885 480 210 65 32 chr5 176209892 176210016 -26875516 + L2 LINE L2 3186 3313 0 42 48 0 0 chr5 176210731 176210794 -26874738 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr5 176211265 176211294 -26874238 + AT_rich Low_complexity Low_complexity 1 29 0 1499 173 25 7 chr5 176211620 176211897 -26873635 - AluJo SINE Alu -26 286 5 401 236 105 11 chr5 176212155 176212338 -26873194 + MIR SINE MIR 49 256 -6 4626 110 29 40 chr5 176212964 176213690 -26871842 - L1PA14 LINE L1 -1 6160 5427 339 25 0 0 chr5 176213690 176213730 -26871802 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 2099 122 0 3 chr5 176213731 176214017 -26871515 - AluSp SINE Alu -26 287 3 4626 110 29 40 chr5 176214017 176214108 -26871424 - L1PA14 LINE L1 -734 5427 5336 2407 99 0 73 chr5 176214108 176214313 -26871219 - THE1A LTR MaLR 0 355 189 2324 84 7 10 chr5 176214313 176214623 -26870909 + AluY SINE Alu 3 311 0 2407 99 0 73 chr5 176214623 176214800 -26870732 - THE1A LTR MaLR -166 189 1 4626 110 29 40 chr5 176214800 176215512 -26870020 - L1PA14 LINE L1 -825 5336 4631 248 314 97 32 chr5 176215615 176215739 -26869793 - MIR3 SINE MIR -24 184 53 380 328 62 16 chr5 176215779 176215971 -26869561 + MIR SINE MIR 29 229 -33 21 0 0 0 chr5 176216609 176216630 -26868902 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 176216746 176216770 -26868762 + (TG)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr5 176217117 176217142 -26868390 + AT_rich Low_complexity Low_complexity 1 25 0 3276 108 4 20 chr5 176217142 176217643 -26867889 - L1PB2 LINE L1 -2 6149 5657 920 154 5 109 chr5 176217903 176218123 -26867409 + MER58A DNA MER1_type 27 223 -1 23 54 0 0 chr5 176219343 176219380 -26866152 + AT_rich Low_complexity Low_complexity 1 37 0 313 290 274 12 chr5 176219996 176220244 -26865288 - MER102b DNA MER1_type -1 340 28 334 200 75 0 chr5 176220489 176220569 -26864963 + Charlie7 DNA MER1_type 2480 2565 -47 346 323 57 6 chr5 176221014 176221172 -26864360 - MIR SINE MIR -5 257 92 21 36 0 0 chr5 176221449 176221477 -26864055 + AT_rich Low_complexity Low_complexity 1 28 0 220 281 0 0 chr5 176221753 176221810 -26863722 - L2 LINE L2 -1 3312 3256 21 36 0 0 chr5 176221886 176221914 -26863618 + AT_rich Low_complexity Low_complexity 1 28 0 303 302 24 0 chr5 176221955 176222081 -26863451 - L1ME LINE L1 -317 5804 5676 208 298 36 24 chr5 176222147 176222231 -26863301 + L3 LINE CR1 1491 1575 -2 575 357 141 22 chr5 176222978 176223671 -26861861 - L2 LINE L2 -56 3257 2494 1122 191 59 0 chr5 176224042 176224246 -26861286 + MER20 DNA MER1_type 1 216 -3 225 257 26 44 chr5 176224613 176224726 -26860806 + L1P LINE L1 5305 5415 -751 264 77 0 0 chr5 176225096 176225135 -26860397 + (CA)n Simple_repeat Simple_repeat 2 40 0 444 286 32 86 chr5 176226626 176226846 -26858686 - L2 LINE L2 0 3313 3106 373 183 19 67 chr5 176226868 176226972 -26858560 - MLT1K LTR MaLR -94 494 396 710 82 0 0 chr5 176227069 176227166 -26858366 + AluY SINE Alu 197 293 -18 296 99 33 0 chr5 176227870 176227921 -26857611 + MADE1 DNA Mariner 1 46 -34 22 70 0 0 chr5 176227973 176228016 -26857516 + AT_rich Low_complexity Low_complexity 1 43 0 704 222 99 0 chr5 176228776 176228947 -26856585 - MER5A DNA MER1_type -1 188 1 16203 38 1 0 chr5 176229222 176231958 -26853574 + L1PA4 LINE L1 3415 6153 -2 383 247 151 24 chr5 176232058 176232224 -26853308 - L2 LINE L2 -1 3312 3126 337 344 46 26 chr5 176232296 176232447 -26853085 - MER5A DNA MER1_type -1 188 35 225 329 79 40 chr5 176232318 176232470 -26853062 + MER5A DNA MER1_type 32 189 0 * 372 43 0 0 chr5 176232752 176232798 -26852734 + (TG)n Simple_repeat Simple_repeat 1 46 0 852 219 0 0 chr5 176232876 176233031 -26852501 + FRAM SINE Alu 1 155 -21 265 250 67 29 chr5 176234255 176234359 -26851173 - MER103 DNA DNA -14 152 45 1672 88 28 4 chr5 176234423 176234672 -26850860 - L1PA10 LINE L1 -3 6165 5911 196 27 54 27 chr5 176234700 176234737 -26850795 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 596 212 0 30 chr5 176234807 176234939 -26850593 - FLAM_A SINE Alu -14 128 1 183 326 0 0 chr5 176234948 176234994 -26850538 - L2 LINE L2 -8 3264 3219 715 255 108 0 chr5 176235226 176235438 -26850094 - MIR SINE MIR -21 241 7 516 325 35 10 chr5 176235550 176235753 -26849779 + MIR SINE MIR 48 255 -7 333 164 45 0 chr5 176235993 176236060 -26849472 - MER58A DNA MER1_type -10 214 145 344 257 14 0 chr5 176236065 176236139 -26849393 + MER2 DNA MER2_type 2 76 -269 479 233 12 129 chr5 176236190 176236245 -26849287 - MER58A DNA MER1_type -193 148 88 1570 141 4 4 chr5 176236245 176236522 -26849010 + L1MA4A LINE L1 6025 6301 -2 479 233 12 129 chr5 176236522 176236629 -26848903 - MER58A DNA MER1_type -253 88 5 256 154 0 0 chr5 176236703 176236755 -26848777 - L1MB4 LINE L1 -3 6177 6126 2353 116 84 2 chr5 176236864 176237270 -26848262 - L1MA8 LINE L1 -4 6287 5849 3952 183 43 12 chr5 176237270 176238178 -26847354 - L1MB3 LINE L1 -46 6137 5201 810 210 0 25 chr5 176238178 176238340 -26847192 - FAM SINE Alu -7 42 1 7369 225 28 36 chr5 176238361 176239437 -26846095 - L1MB3 LINE L1 -933 5213 4164 676 197 15 15 chr5 176239437 176239569 -26845963 + FLAM_C SINE Alu 2 133 0 7369 225 28 36 chr5 176239569 176240654 -26844878 - L1MB3 LINE L1 -1982 4164 3071 3886 214 21 89 chr5 176240666 176241630 -26843902 + MER54A LTR ERVL 4 901 0 1071 259 159 1 chr5 176241635 176242113 -26843419 - L1MB3 LINE L1 -3085 3061 2478 283 236 0 45 chr5 176242113 176242202 -26843330 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 1046 116 5 30 chr5 176242220 176242418 -26843114 - L1MA3 LINE L1 0 7724 7532 4837 22 2 12 chr5 176242419 176243054 -26842478 + L1PA2 LINE L1 5554 6182 0 4331 137 36 15 chr5 176243054 176243797 -26841735 - L1MA3 LINE L1 -195 7529 6771 729 132 0 107 chr5 176243798 176243957 -26841575 - FLAM_C SINE Alu -1 142 1 7020 183 16 3 chr5 176243973 176245415 -26840117 - L1MA3 LINE L1 -792 6773 5314 18233 171 44 11 chr5 176245466 176249471 -26836061 - L1MA3 LINE L1 -3114 4451 326 2158 130 48 20 chr5 176249471 176249825 -26835707 + THE1B LTR MaLR 1 364 0 8885 172 86 4 chr5 176249826 176251285 -26834247 + THE1B-int LTR MaLR 2 1580 0 * 2129 136 48 20 chr5 176251286 176251639 -26833893 + THE1B LTR MaLR 2 364 0 1516 220 25 6 chr5 176251639 176251953 -26833579 - L1MA3 LINE L1 -7232 333 14 9831 167 42 100 chr5 176251960 176252152 -26833380 - L1M4 LINE L1 -3660 2722 2520 1734 178 20 20 chr5 176252152 176252456 -26833076 - AluJb SINE Alu -7 305 2 9831 167 42 100 chr5 176252456 176253215 -26832317 - L1M4 LINE L1 -3862 2520 1719 1629 153 50 68 chr5 176253215 176253417 -26832115 - THE1C LTR MaLR 0 375 182 2408 77 0 0 chr5 176253417 176253714 -26831818 - AluY SINE Alu -14 297 1 1629 153 50 68 chr5 176253714 176253891 -26831641 - THE1C LTR MaLR -193 182 3 9831 167 42 100 chr5 176253891 176254721 -26830811 - L1M4 LINE L1 -4663 1719 842 515 96 0 0 chr5 176254721 176254794 -26830738 - Alu SINE Alu -13 297 225 878 93 0 0 chr5 176254794 176254901 -26830631 - AluSg SINE Alu -199 111 5 9831 167 42 100 chr5 176254901 176255824 -26829708 - L1M4 LINE L1 -5538 844 5 280 350 102 60 chr5 176255848 176256182 -26829350 - L2 LINE L2 -25 3247 2900 362 250 218 51 chr5 176256913 176257069 -26828463 - MER63A DNA MER1_type -1 209 28 267 326 137 23 chr5 176257221 176257396 -26828136 - MIR SINE MIR -12 250 56 888 266 31 35 chr5 176257681 176257937 -26827595 + MIR SINE MIR 2 256 -6 208 271 62 0 chr5 176258572 176258620 -26826912 + MIR SINE MIR 211 261 -1 428 329 30 12 chr5 176259632 176259799 -26825733 - L2 LINE L2 -1 3271 3102 5080 175 32 17 chr5 176260016 176261083 -26824449 - L1MA9 LINE L1 0 6312 5232 3555 199 28 9 chr5 176261082 176261861 -26823671 + L1 LINE L1 4130 4923 -1223 * 189 324 69 69 chr5 176262357 176262502 -26823030 - MIR SINE MIR -19 243 99 218 296 74 37 chr5 176263511 176263592 -26821940 + L2 LINE L2 3181 3264 -49 2157 116 0 13 chr5 176263810 176264112 -26821420 - AluSx SINE Alu -14 298 1 342 400 0 0 chr5 176264895 176265025 -26820507 + MIR3 SINE MIR 33 162 -46 276 160 60 0 chr5 176265162 176265212 -26820320 - L2 LINE L2 -16 3297 3245 333 0 0 0 chr5 176265314 176265351 -26820181 + (TG)n Simple_repeat Simple_repeat 2 38 0 221 57 29 0 chr5 176266319 176266354 -26819178 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2257 75 0 4 chr5 176266354 176266632 -26818900 + AluY SINE Alu 1 277 -34 345 47 0 0 chr5 176266637 176266680 -26818852 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 271 313 107 49 chr5 176266942 176267185 -26818347 + MLT1K LTR MaLR 324 580 -8 351 289 53 53 chr5 176267571 176267758 -26817774 - L2 LINE L2 0 3313 3127 215 323 168 0 chr5 176268092 176268253 -26817279 - L2 LINE L2 -443 2871 2684 548 237 65 53 chr5 176268259 176268428 -26817104 - MER5B DNA MER1_type -7 171 1 504 321 61 53 chr5 176268474 176268835 -26816697 + L3 LINE CR1 911 1274 -303 411 283 58 8 chr5 176268831 176268951 -26816581 - L2 LINE L2 -2 3311 3186 * 317 282 12 0 chr5 176269268 176269353 -26816179 - MIR SINE MIR -18 244 159 994 175 75 100 chr5 176269365 176269766 -26815766 - LTR37B LTR ERV1 0 468 78 702 251 50 0 chr5 176270859 176271038 -26814494 - MIR SINE MIR -38 224 37 517 265 45 65 chr5 176271071 176271271 -26814261 + MIR3 SINE MIR 12 207 -1 22 35 0 0 chr5 176275161 176275190 -26810342 + AT_rich Low_complexity Low_complexity 1 29 0 2497 69 0 0 chr5 176275195 176275500 -26810032 + AluY SINE Alu 1 305 -6 959 155 6 0 chr5 176275539 176275700 -26809832 + MER46A DNA MER2_type 4 165 -71 560 245 75 19 chr5 176276243 176276402 -26809130 + MIR SINE MIR 77 244 -18 486 208 188 0 chr5 176277876 176278030 -26807502 - MER105 DNA DNA -14 190 8 561 301 10 0 chr5 176278144 176278340 -26807192 + L1ME3 LINE L1 5958 6155 -7 507 296 107 21 chr5 176278900 176279133 -26806399 + MIR SINE MIR 7 259 -3 333 0 0 0 chr5 176279164 176279201 -26806331 + (T)n Simple_repeat Simple_repeat 1 37 0 358 312 11 91 chr5 176279275 176279461 -26806071 + MIR3 SINE MIR 16 186 -22 216 111 0 0 chr5 176279985 176280021 -26805511 + (T)n Simple_repeat Simple_repeat 1 36 0 303 239 37 80 chr5 176280031 176280194 -26805338 + L2 LINE L2 3116 3271 -42 316 323 23 31 chr5 176280351 176280481 -26805051 + MIR SINE MIR 46 174 -88 861 268 62 85 chr5 176280811 176281782 -26803750 + L2 LINE L2 2195 3141 -172 312 281 208 73 chr5 176282896 176283238 -26802294 + L2 LINE L2 2926 3313 0 210 163 0 61 chr5 176284870 176284919 -26800613 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 683 163 78 0 chr5 176284958 176285111 -26800421 - Tigger1 DNA MER2_type -44 2374 2210 2350 260 136 16 chr5 176285120 176286139 -26799393 - MER69B DNA AcHobo -58 1168 27 254 323 54 21 chr5 176286495 176286588 -26798944 + MIR SINE MIR 41 136 -72 221 56 0 28 chr5 176286700 176286736 -26798796 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 541 287 11 50 chr5 176286966 176287085 -26798447 - MER5B DNA MER1_type 0 178 67 2215 111 3 7 chr5 176287085 176287392 -26798140 - AluSq SINE Alu -7 306 1 541 287 11 50 chr5 176287392 176287453 -26798079 - MER5B DNA MER1_type -111 67 5 250 284 87 47 chr5 176288261 176288388 -26797144 - L2 LINE L2 0 3272 3141 181 214 48 0 chr5 176288357 176288399 -26797133 + L3b LINE CR1 1347 1390 -193 * 26 0 0 0 chr5 176288899 176288925 -26796607 + AT_rich Low_complexity Low_complexity 1 26 0 702 190 9 0 chr5 176290902 176291073 -26794459 + FLAM_C SINE Alu 1 172 0 1436 241 0 3 chr5 176291675 176291957 -26793575 - AluJo SINE Alu -31 281 1 2481 84 0 0 chr5 176292143 176292454 -26793078 - AluY SINE Alu 0 311 1 4982 172 25 10 chr5 176293586 176295604 -26789928 + L1PB3 LINE L1 4114 6154 0 201 182 0 0 chr5 176295605 176295638 -26789894 + (TA)n Simple_repeat Simple_repeat 1 33 0 396 299 166 6 chr5 176296130 176296315 -26789217 - MIR SINE MIR -6 256 44 292 207 61 24 chr5 176296608 176296690 -26788842 + MIR SINE MIR 153 237 -25 827 272 99 9 chr5 176296731 176296963 -26788569 + MIR SINE MIR 6 258 -4 414 0 0 0 chr5 176296971 176297017 -26788515 + (CAT)n Simple_repeat Simple_repeat 3 48 0 490 282 119 31 chr5 176297017 176297244 -26788288 - MIR SINE MIR -15 247 1 220 328 0 0 chr5 176297646 176297704 -26787828 - MIR3 SINE MIR -32 176 119 723 280 5 0 chr5 176298090 176298279 -26787253 - MIR SINE MIR -71 191 2 223 214 0 0 chr5 176298565 176298607 -26786925 + L2 LINE L2 3230 3271 -1 403 238 50 0 chr5 176300402 176300503 -26785029 - MER3 DNA MER1_type -89 120 15 226 302 16 0 chr5 176300932 176300995 -26784537 + MIR3 SINE MIR 111 174 -34 1731 151 0 0 chr5 176301010 176301268 -26784264 - AluSx SINE Alu -15 297 40 1757 251 61 26 chr5 176301487 176302025 -26783507 - MLT1G1 LTR MaLR 0 595 39 779 224 158 59 chr5 176302025 176302450 -26783082 + MLT1D LTR MaLR 1 467 0 522 323 76 9 chr5 176302531 176302754 -26782778 - MIR SINE MIR -7 255 18 467 318 8 8 chr5 176303880 176304006 -26781526 - L2 LINE L2 -5 3267 3142 724 304 47 5 chr5 176304727 176304941 -26780591 - MIR SINE MIR -10 252 30 4668 160 109 40 chr5 176305407 176305617 -26779915 + LTR28 LTR ERV1 1 195 -825 2238 103 0 0 chr5 176305617 176305899 -26779633 - AluSq SINE Alu -11 302 21 4668 160 109 40 chr5 176305899 176306642 -26778890 + LTR28 LTR ERV1 195 1020 0 261 389 45 13 chr5 176306711 176306868 -26778664 + MIR SINE MIR 27 188 -74 346 319 56 14 chr5 176307272 176307416 -26778116 - L2 LINE L2 -236 3077 2928 2186 119 0 3 chr5 176307736 176308039 -26777493 + AluSc SINE Alu 1 302 -7 275 280 17 8 chr5 176309256 176309374 -26776158 - MLT1L LTR MaLR -347 268 150 306 328 35 36 chr5 176310280 176310457 -26775075 + MIR3 SINE MIR 28 206 -2 756 177 30 0 chr5 176310495 176310659 -26774873 + L1M4 LINE L1 5291 5459 -719 209 185 37 0 chr5 176311023 176311077 -26774455 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 203 318 0 0 chr5 176311080 176311143 -26774389 + (TATG)n Simple_repeat Simple_repeat 3 65 0 254 256 23 12 chr5 176311146 176311232 -26774300 - L1MC4 LINE L1 -1341 6701 6615 336 281 0 0 chr5 176311248 176311387 -26774145 + (TA)n Simple_repeat Simple_repeat 2 140 0 2203 109 0 10 chr5 176313519 176313821 -26771711 - AluSg1 SINE Alu -10 299 1 2643 96 75 0 chr5 176314022 176314435 -26771097 + MER1A DNA MER1_type 86 533 0 265 316 128 8 chr5 176314752 176314869 -26770663 + MIR3 SINE MIR 30 160 -48 402 299 41 14 chr5 176315763 176315910 -26769622 - MIR SINE MIR -20 242 92 497 264 94 5 chr5 176317487 176317699 -26767833 + Tigger8 DNA MER2_type 306 536 -130 400 288 106 35 chr5 176319385 176319583 -26765949 - L2 LINE L2 -1494 1820 1609 940 45 0 0 chr5 176320126 176320236 -26765296 - AluY SINE Alu -13 298 189 353 257 38 0 chr5 176320476 176320581 -26764951 - L1MC4 LINE L1 -15 8027 7919 206 306 0 28 chr5 176320585 176320657 -26764875 + CT-rich Low_complexity Low_complexity 1 70 0 692 202 6 18 chr5 176320691 176320859 -26764673 - L1MC4 LINE L1 -188 7854 7689 198 0 0 0 chr5 176320859 176320881 -26764651 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr5 176321357 176321380 -26764152 + AT_rich Low_complexity Low_complexity 1 23 0 669 307 117 3 chr5 176321524 176321850 -26763682 - MLT1J1 LTR MaLR -15 431 69 25 65 0 0 chr5 176322284 176322330 -26763202 + AT_rich Low_complexity Low_complexity 1 46 0 329 280 26 58 chr5 176322865 176323054 -26762478 + L2 LINE L2 3101 3283 -30 1788 340 56 2 chr5 176323436 176323974 -26761558 + L1MB3 LINE L1 5617 6183 0 1110 264 120 36 chr5 176324515 176325312 -26760220 - L2 LINE L2 0 3313 2440 359 309 70 30 chr5 176326052 176326253 -26759279 + MIR SINE MIR 18 226 -36 183 250 0 0 chr5 176327137 176327177 -26758355 - MIR3 SINE MIR -1 207 168 702 299 83 4 chr5 176327205 176327446 -26758086 + MIR SINE MIR 3 262 0 287 278 142 45 chr5 176327461 176327637 -26757895 - MIR SINE MIR -56 206 14 2171 121 3 10 chr5 176328678 176328992 -26756540 + AluSx SINE Alu 1 312 0 250 304 112 16 chr5 176328993 176329118 -26756414 + MIR3 SINE MIR 23 159 -49 316 370 37 76 chr5 176329620 176330028 -26755504 + L2 LINE L2 2881 3272 0 418 344 15 8 chr5 176330580 176330711 -26754821 + MIR SINE MIR 16 147 -61 229 248 75 93 chr5 176331055 176331216 -26754316 - L2 LINE L2 -189 3083 2926 263 316 83 42 chr5 176331272 176331465 -26754067 - MIR SINE MIR -12 250 50 231 322 174 9 chr5 176331699 176331814 -26753718 + MIR SINE MIR 16 149 -113 24 32 0 0 chr5 176331822 176331853 -26753679 + AT_rich Low_complexity Low_complexity 1 31 0 463 107 0 180 chr5 176334929 176335051 -26750481 - MER1B DNA MER1_type -3 336 237 * 707 204 8 0 chr5 176335047 176335179 -26750353 - MER1B DNA MER1_type -164 133 1 324 227 136 3 chr5 176335181 176335316 -26750216 + MIR SINE MIR 4 191 -71 5287 163 39 68 chr5 176335366 176335938 -26749594 + Tigger3b DNA MER2_type 41 628 -2400 2056 122 7 14 chr5 176335938 176336232 -26749300 + AluSq SINE Alu 5 296 -17 5287 163 39 68 chr5 176336232 176336885 -26748647 + Tigger3b DNA MER2_type 628 1231 0 1944 159 8 31 chr5 176336891 176337242 -26748290 - MER2 DNA MER2_type 0 344 2 255 313 223 0 chr5 176337691 176337803 -26747729 - L2 LINE L2 0 3272 3136 3948 142 68 34 chr5 176337839 176338598 -26746934 - LTR1 LTR ERV1 0 785 1 1581 196 82 22 chr5 176338807 176339209 -26746323 - MER63B DNA MER1_type -2 434 9 279 333 10 10 chr5 176339291 176339387 -26746145 + MIR3 SINE MIR 14 109 -99 769 220 44 52 chr5 176340043 176340293 -26745239 + ORSL DNA AcHobo 28 275 0 2699 152 44 9 chr5 176340566 176341106 -26744426 - MER89 LTR ERV1 0 559 1 316 265 233 26 chr5 176341108 176341297 -26744235 - MIR SINE MIR -31 231 4 253 290 14 14 chr5 176341298 176341367 -26744165 + MIR3 SINE MIR 116 184 -24 391 345 111 0 chr5 176342211 176342446 -26743086 - MIR SINE MIR 0 262 2 708 281 24 20 chr5 176342889 176343135 -26742397 + MLT1J1 LTR MaLR 50 296 -150 811 146 124 28 chr5 176343154 176343332 -26742200 - MER3 DNA MER1_type -6 203 9 285 340 20 0 chr5 176343462 176343562 -26741970 - L2 LINE L2 -13 3300 3199 305 288 126 9 chr5 176344075 176344186 -26741346 + L2 LINE L2 3137 3260 -12 873 204 30 0 chr5 176344409 176344576 -26740956 - MER5A DNA MER1_type 0 189 18 233 271 34 93 chr5 176345484 176345616 -26739916 + MER5A DNA MER1_type 50 174 -4 425 287 46 0 chr5 176345928 176346036 -26739496 - L2 LINE L2 -15 3298 3186 2593 181 45 2 chr5 176346085 176346615 -26738917 - L1MB3 LINE L1 -7 6176 5624 2141 151 22 69 chr5 176346623 176347132 -26738400 - LTR43 LTR ERV1 -13 589 105 221 311 79 55 chr5 176347648 176347812 -26737720 + MIR SINE MIR 16 183 -79 2020 153 3 3 chr5 176348116 176348417 -26737115 - AluSx SINE Alu -11 301 1 21 82 0 0 chr5 176349011 176349060 -26736472 + AT_rich Low_complexity Low_complexity 1 49 0 1026 243 58 7 chr5 176349102 176349378 -26736154 + MLT1E1 LTR MaLR 3 292 -362 322 315 107 0 chr5 176349478 176349627 -26735905 + MLT1E1 LTR MaLR 490 654 0 204 40 0 0 chr5 176350706 176350731 -26734801 + (TCTCC)n Simple_repeat Simple_repeat 3 27 0 342 254 70 26 chr5 176350917 176351031 -26734501 - MIR SINE MIR -49 213 95 262 54 71 89 chr5 176351031 176351087 -26734445 - MLT2A1 LTR ERVL 0 453 399 198 0 0 0 chr5 176351102 176351124 -26734408 + (CA)n Simple_repeat Simple_repeat 2 23 0 2673 93 20 8 chr5 176351124 176351523 -26734009 - MLT2A1 LTR ERVL -40 404 1 253 267 63 105 chr5 176351629 176351820 -26733712 + L2 LINE L2 3071 3253 -19 2272 103 0 3 chr5 176352641 176352942 -26732590 - AluSq SINE Alu -13 300 1 287 253 12 48 chr5 176353125 176353208 -26732324 + MIR SINE MIR 72 151 -111 461 321 18 18 chr5 176353856 176354024 -26731508 + MIR SINE MIR 30 197 -65 354 365 56 15 chr5 176354289 176354383 -26731149 + MIR SINE MIR 46 135 -127 2980 99 55 0 chr5 176354383 176354816 -26730716 + L1PA16 LINE L1 5701 6157 -9 354 365 56 15 chr5 176354816 176354918 -26730614 + MIR SINE MIR 135 250 -12 629 280 51 9 chr5 176355767 176355981 -26729551 + MIR SINE MIR 13 235 -27 323 322 11 58 chr5 176356757 176356931 -26728601 - MIR SINE MIR -68 194 29 420 289 67 79 chr5 176356972 176357068 -26728464 - L2 LINE L2 0 3313 3217 2771 19 0 6 chr5 176357068 176357380 -26728152 - AluYb8 SINE Alu -8 310 1 420 289 67 79 chr5 176357380 176357612 -26727920 - L2 LINE L2 -96 3217 2989 1111 154 0 32 chr5 176357775 176357963 -26727569 - AluJo SINE Alu -27 285 104 1140 174 46 36 chr5 176358768 176358987 -26726545 - MER58A DNA MER1_type -1 223 3 2843 96 12 2 chr5 176360403 176360808 -26724724 + L1PB1 LINE L1 5743 6151 0 278 323 48 16 chr5 176361055 176361179 -26724353 - MIR SINE MIR -57 151 24 204 67 0 0 chr5 176364056 176364086 -26721446 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 213 274 78 78 chr5 176364331 176364433 -26721099 + MIR SINE MIR 42 143 -119 198 0 0 0 chr5 176365312 176365334 -26720198 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 832 209 32 36 chr5 176365630 176365850 -26719682 - MER20 DNA MER1_type 0 219 1 337 113 0 25 chr5 176366125 176366205 -26719327 + (TTATA)n Simple_repeat Simple_repeat 1 78 0 853 117 4 17 chr5 176366219 176366459 -26719073 + (TTATA)n Simple_repeat Simple_repeat 1 237 0 29 0 0 0 chr5 176366459 176366488 -26719044 + AT_rich Low_complexity Low_complexity 1 29 0 346 266 43 87 chr5 176366732 176366892 -26718640 + MIR SINE MIR 48 201 -61 1977 217 87 8 chr5 176367651 176368158 -26717374 - MER68 LTR ERV1 -10 552 6 256 269 164 0 chr5 176368199 176368303 -26717229 - MIR SINE MIR -103 159 39 12654 191 43 14 chr5 176368564 176374604 -26710928 - L1PB2 LINE L1 -3 6205 8 5228 195 15 26 chr5 176374576 176374696 -26710836 - L1PBa LINE L1 -5224 980 860 * 191 0 103 0 chr5 176374696 176374725 -26710807 + T-rich Low_complexity Low_complexity 2 33 0 2116 121 0 0 chr5 176374728 176375009 -26710523 - AluSq SINE Alu -32 281 1 5228 195 15 26 chr5 176375009 176376057 -26709475 - L1PBa LINE L1 -5346 858 -179 181 268 113 0 chr5 176376281 176376352 -26709180 - MIR SINE MIR -182 80 2 212 350 55 55 chr5 176376425 176376625 -26708907 + MIR SINE MIR 20 219 -43 403 302 77 69 chr5 176376756 176377160 -26708372 - MLT1K LTR MaLR -140 448 42 422 305 17 0 chr5 176378128 176378246 -26707286 - MIR3 SINE MIR -8 200 81 385 313 35 79 chr5 176378872 176379099 -26706433 + L2 LINE L2 2935 3151 -121 186 43 0 0 chr5 176379341 176379364 -26706168 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 410 298 96 27 chr5 176379491 176379677 -26705855 - MIR3 SINE MIR 0 208 3 414 282 124 39 chr5 176381829 176382063 -26703469 - MIR SINE MIR -1 261 8 525 299 35 5 chr5 176382089 176382286 -26703246 - MIR SINE MIR 0 262 60 554 168 5 147 chr5 176382445 176382635 -26702897 - MER106B DNA MER1_type -1 1058 896 4101 179 47 17 chr5 176382957 176384010 -26701522 - L1MB5 LINE L1 0 6174 5092 399 292 97 36 chr5 176384230 176384425 -26701107 + MIR SINE MIR 3 209 -53 282 319 85 14 chr5 176385298 176385439 -26700093 + MIR3 SINE MIR 1 151 -57 356 337 95 37 chr5 176385714 176385957 -26699575 - L2 LINE L2 -1 3312 3056 2186 114 14 0 chr5 176385987 176386276 -26699256 - AluSx SINE Alu -19 293 1 406 236 16 32 chr5 176386626 176386749 -26698783 + MIR SINE MIR 30 150 -58 306 73 0 0 chr5 176387042 176387083 -26698449 + (TC)n Simple_repeat Simple_repeat 1 41 0 721 323 13 9 chr5 176388511 176388740 -26696792 + MIR SINE MIR 7 236 -26 300 158 0 0 chr5 176388754 176388811 -26696721 + (CA)n Simple_repeat Simple_repeat 1 57 0 243 341 11 0 chr5 176388852 176388940 -26696592 - L2 LINE L2 0 3313 3225 188 355 79 0 chr5 176388966 176389042 -26696490 + L2 LINE L2 3193 3274 -39 585 304 13 0 chr5 176389782 176389940 -26695592 - MIR3 SINE MIR -5 203 44 1621 113 25 0 chr5 176390533 176390773 -26694759 + L1PA10 LINE L1 5912 6157 -11 656 250 49 66 chr5 176390793 176391037 -26694495 - MIR SINE MIR -15 247 8 224 328 56 31 chr5 176391046 176391241 -26694291 - L3 LINE CR1 -70 1507 1308 2084 124 3 40 chr5 176391691 176392013 -26693519 - AluSx SINE Alu -2 310 1 265 329 107 21 chr5 176392262 176392402 -26693130 + L2 LINE L2 3121 3272 0 288 130 0 58 chr5 176392512 176392581 -26692951 + AluS SINE Alu 1 65 -238 1206 139 0 6 chr5 176392685 176392865 -26692667 + AluSq SINE Alu 129 307 -6 201 74 0 0 chr5 176393524 176393551 -26691981 + (A)n Simple_repeat Simple_repeat 1 27 0 381 117 0 0 chr5 176394031 176394091 -26691441 + (TCCCC)n Simple_repeat Simple_repeat 2 61 0 895 226 25 0 chr5 176394150 176394354 -26691178 + L3 LINE CR1 399 607 -970 791 265 26 4 chr5 176394860 176395094 -26690438 - MIR SINE MIR -14 248 10 1073 344 146 29 chr5 176395608 176396425 -26689107 + L3 LINE CR1 600 1511 -66 1379 223 58 77 chr5 176396429 176396513 -26689019 + L1ME1 LINE L1 5686 5770 -396 934 182 101 5 chr5 176396513 176396711 -26688821 + MER20 DNA MER1_type 1 217 -2 1379 223 58 77 chr5 176396711 176397107 -26688425 + L1ME1 LINE L1 5770 6157 -9 304 236 124 43 chr5 176398009 176398170 -26687362 - LTR41 LTR ERVL -599 174 1 1086 206 19 27 chr5 176398222 176398479 -26687053 + MER76 LTR ERV 52 306 -382 2342 183 60 4 chr5 176398648 176399166 -26686366 + MLT1-int LTR MaLR 4 550 -821 572 263 28 22 chr5 176399180 176399359 -26686173 + MLT1C LTR MaLR 288 467 0 250 281 0 0 chr5 176400335 176400392 -26685140 + MIR SINE MIR 41 97 -111 180 77 0 0 chr5 176400626 176400652 -26684880 + (CAGG)n Simple_repeat Simple_repeat 4 29 0 246 291 73 9 chr5 176401031 176401141 -26684391 + MIR SINE MIR 91 207 -55 227 300 62 25 chr5 176401680 176401760 -26683772 - L2 LINE L2 -23 3290 3208 284 224 17 0 chr5 176401845 176401903 -26683629 - MER5A DNA MER1_type 0 189 131 189 159 0 0 chr5 176403077 176403121 -26682411 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 420 275 38 12 chr5 176403274 176403434 -26682098 + MER103 DNA DNA 1 164 -2 192 356 10 39 chr5 176404865 176404969 -26680563 - MIR3 SINE MIR -10 198 98 579 88 0 0 chr5 176405252 176405332 -26680200 + MADE1 DNA Mariner 1 80 0 1266 161 165 8 chr5 176406061 176406328 -26679204 + AluJo SINE Alu 1 305 0 850 293 36 4 chr5 176406373 176406566 -26678966 - MIR SINE MIR -26 236 34 2184 132 0 3 chr5 176406566 176406869 -26678663 - AluSg SINE Alu -8 302 1 850 293 36 4 chr5 176406869 176406900 -26678632 - MIR SINE MIR -228 34 5 262 154 491 18 chr5 176407580 176407690 -26677842 - MER5A DNA MER1_type -2 187 26 254 333 74 30 chr5 176408882 176409017 -26676515 + MIR SINE MIR 4 144 -118 846 197 137 4 chr5 176409051 176409284 -26676248 - ORSL DNA AcHobo -1 274 11 187 262 0 0 chr5 176409295 176409337 -26676195 + L2 LINE L2 3201 3242 -30 1013 205 26 0 chr5 176409357 176409552 -26675980 - MER58A DNA MER1_type -23 201 2 258 305 56 76 chr5 176410315 176410414 -26675118 + MIR SINE MIR 57 152 -110 1763 182 27 3 chr5 176410414 176410710 -26674822 + AluJo SINE Alu 1 303 -9 258 305 56 76 chr5 176410710 176410807 -26674725 + MIR SINE MIR 152 249 -13 257 351 52 8 chr5 176410913 176411047 -26674485 + MIR SINE MIR 50 189 -73 2068 142 0 0 chr5 176411057 176411345 -26674187 + AluSx SINE Alu 1 288 -24 227 197 30 45 chr5 176411995 176412061 -26673471 - MIR SINE MIR -50 212 148 2252 44 0 0 chr5 176412709 176412982 -26672550 - L1PA3 LINE L1 -14 6141 5869 2166 224 95 23 chr5 176413511 176414773 -26670759 + L1ME2 LINE L1 4488 5896 -266 2085 133 0 17 chr5 176414773 176415075 -26670457 - AluSx SINE Alu -15 297 1 2166 224 95 23 chr5 176415075 176415363 -26670169 + L1ME2 LINE L1 5896 6162 0 461 169 0 0 chr5 176415552 176415629 -26669903 - Tigger7 DNA MER2_type -6 2481 2405 501 216 0 0 chr5 176415629 176415740 -26669792 - Tigger5 DNA MER2_type 0 2323 2213 989 205 50 0 chr5 176415742 176415942 -26669590 - Tigger7 DNA MER2_type -523 210 1 410 353 82 6 chr5 176416006 176416176 -26669356 - MER5A DNA MER1_type 0 189 7 670 194 73 26 chr5 176416420 176416611 -26668921 + MER20 DNA MER1_type 16 215 -4 636 280 19 38 chr5 176417188 176417399 -26668133 + MIR SINE MIR 54 260 -2 183 156 0 0 chr5 176419391 176419423 -26666109 + A-rich Low_complexity Low_complexity 1 32 0 181 208 83 0 chr5 176420457 176420505 -26665027 + MIR SINE MIR 124 175 -87 2173 125 0 0 chr5 176420937 176421233 -26664299 - AluSx SINE Alu -16 296 1 2249 107 7 10 chr5 176421438 176421748 -26663784 - AluSx SINE Alu -3 309 1 338 224 120 24 chr5 176421775 176421900 -26663632 + MER102a DNA MER1_type 194 330 0 361 233 65 73 chr5 176422667 176422899 -26662633 - MLT1K LTR MaLR -187 401 172 246 312 26 45 chr5 176423373 176423527 -26662005 + MIR SINE MIR 91 241 -21 362 301 155 9 chr5 176423716 176423929 -26661603 - MER102a DNA MER1_type -86 244 1 213 226 0 65 chr5 176423972 176424034 -26661498 + MIR SINE MIR 126 183 -79 225 160 20 20 chr5 176424645 176424695 -26660837 + MER3 DNA MER1_type 31 80 -129 225 0 0 0 chr5 176425170 176425195 -26660337 + (T)n Simple_repeat Simple_repeat 1 25 0 806 214 6 0 chr5 176425235 176425403 -26660129 - MER20 DNA MER1_type -2 217 49 719 266 34 6 chr5 176425415 176425592 -26659940 - L2 LINE L2 -266 3047 2866 184 394 0 0 chr5 176426651 176426717 -26658815 - L2 LINE L2 -16 3256 3191 * 324 278 11 22 chr5 176426716 176426806 -26658726 - MIR SINE MIR -121 141 53 10877 210 45 48 chr5 176427712 176427737 -26657795 + L1M2 LINE L1 3 27 -6821 1973 134 28 3 chr5 176427737 176428028 -26657504 + AluSx SINE Alu 1 298 -14 10877 210 45 48 chr5 176428028 176429864 -26655668 + L1M2 LINE L1 27 1867 -4981 2499 94 0 0 chr5 176429864 176430173 -26655359 + AluSg SINE Alu 1 309 -1 10877 210 45 48 chr5 176430173 176430311 -26655221 + L1M2 LINE L1 1867 2004 -4844 203 0 37 0 chr5 176430311 176430338 -26655194 + (TA)n Simple_repeat Simple_repeat 2 29 0 10877 210 45 48 chr5 176430338 176433917 -26651615 + L1M2 LINE L1 2004 5564 -1284 708 236 6 28 chr5 176434604 176434786 -26650746 - MLT2B1 LTR ERVL -13 507 330 860 162 53 53 chr5 176434867 176434917 -26650615 - L1MA8 LINE L1 -6 6285 6236 4848 45 2 7 chr5 176434917 176435514 -26650018 - L1PA7 LINE L1 -3 6151 5558 860 162 53 53 chr5 176435514 176435710 -26649822 - L1MA8 LINE L1 -54 6237 6039 347 184 13 0 chr5 176435710 176435786 -26649746 - MLT2B2 LTR ERVL -438 77 1 382 297 34 122 chr5 176436920 176437240 -26648292 + L2 LINE L2 2665 2956 -358 248 257 81 59 chr5 176438970 176439106 -26646426 - MLT1I LTR MaLR -169 240 102 517 256 111 12 chr5 176439144 176439316 -26646216 + MLT1I LTR MaLR 217 405 -4 252 351 0 0 chr5 176439413 176439487 -26646045 - MIR SINE MIR -182 80 7 246 179 0 0 chr5 176439492 176439548 -26645984 + CT-rich Low_complexity Low_complexity 2 57 0 204 40 0 0 chr5 176439962 176439987 -26645545 + (TC)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr5 176439986 176440006 -26645526 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 189 363 135 12 chr5 176440178 176440423 -26645109 - L3b LINE CR1 -38 1545 1271 2480 225 48 2 chr5 176440637 176441263 -26644269 - L1MB7 LINE L1 -30 6154 5500 255 103 0 0 chr5 176441277 176441316 -26644216 + (TG)n Simple_repeat Simple_repeat 2 40 0 203 302 0 0 chr5 176441371 176441414 -26644118 + L2 LINE L2 3208 3250 -22 216 263 50 25 chr5 176441470 176441550 -26643982 + MIR SINE MIR 112 193 -69 275 285 59 43 chr5 176442303 176442489 -26643043 - MER106A DNA MER1_type -46 190 2 527 238 0 8 chr5 176442590 176442716 -26642816 - L2 LINE L2 0 3313 3189 2452 85 0 0 chr5 176444370 176444677 -26640855 - AluY SINE Alu -4 307 1 1312 217 54 7 chr5 176444689 176444966 -26640566 - AluJo SINE Alu -22 290 1 512 346 71 12 chr5 176445914 176446154 -26639378 + MIR SINE MIR 7 260 -2 399 272 97 114 chr5 176446230 176446255 -26639277 - L1ME4a LINE L1 -33 6088 6064 2225 120 0 10 chr5 176446255 176446554 -26638978 + AluSq SINE Alu 3 298 -15 399 272 97 114 chr5 176446554 176446724 -26638808 - L1ME4a LINE L1 -57 6064 5893 330 98 0 0 chr5 176446724 176446775 -26638757 + (TA)n Simple_repeat Simple_repeat 1 51 0 399 272 97 114 chr5 176446775 176447041 -26638491 - L1ME4a LINE L1 -228 5893 5634 422 273 60 37 chr5 176447829 176448045 -26637487 - MER102a DNA MER1_type -22 308 88 216 0 0 0 chr5 176448112 176448136 -26637396 + (CA)n Simple_repeat Simple_repeat 2 25 0 430 340 103 46 chr5 176448148 176448672 -26636860 + L1MC4a LINE L1 6043 6596 -1212 294 50 0 0 chr5 176448676 176448716 -26636816 + (CA)n Simple_repeat Simple_repeat 2 41 0 1218 208 54 75 chr5 176448740 176449366 -26636166 + L1MC5 LINE L1 6652 7264 -697 1497 193 74 49 chr5 176449406 176449877 -26635655 + MLT1D LTR MaLR 23 505 0 662 194 36 0 chr5 176449894 176450033 -26635499 + L1MC5 LINE L1 7289 7432 -529 372 221 46 42 chr5 176450169 176450429 -26635103 + L1MC5 LINE L1 7558 7901 -60 22 0 0 0 chr5 176450443 176450465 -26635067 + AT_rich Low_complexity Low_complexity 1 22 0 2103 134 3 0 chr5 176451474 176451765 -26633767 + AluSx SINE Alu 1 292 -20 354 322 46 33 chr5 176451805 176451957 -26633575 - MIR SINE MIR -3 259 106 308 89 0 0 chr5 176452880 176452925 -26632607 - MER58 DNA MER1_type -5 2415 2371 254 295 26 0 chr5 176452938 176453016 -26632516 - MER58 DNA MER1_type -98 117 38 518 333 92 14 chr5 176453597 176453891 -26631641 + L2 LINE L2 2502 2818 -496 274 325 121 56 chr5 176453908 176454157 -26631375 + L2 LINE L2 2994 3258 -14 2153 130 7 0 chr5 176454244 176454544 -26630988 + AluSg SINE Alu 1 302 -8 1455 168 66 14 chr5 176454627 176454913 -26630619 + MER7A DNA MER2_type 47 345 -1 21 57 0 0 chr5 176454919 176454954 -26630578 + AT_rich Low_complexity Low_complexity 1 35 0 312 279 142 0 chr5 176454978 176455168 -26630364 - L1ME1 LINE L1 -48 6118 5902 295 304 0 9 chr5 176455513 176455628 -26629904 - MLT1L LTR MaLR -499 116 3 331 322 72 47 chr5 176457021 176457257 -26628275 + MIR SINE MIR 13 254 -8 373 271 126 26 chr5 176457312 176457463 -26628069 - L3 LINE CR1 -42 1535 1370 250 277 0 36 chr5 176457536 176457619 -26627913 + L1ME LINE L1 5551 5630 -491 21693 171 36 29 chr5 176457693 176459045 -26626487 + L1PA6 LINE L1 10 1351 -5118 2029 144 0 3 chr5 176459045 176459351 -26626181 + AluSx SINE Alu 1 305 -7 21693 171 36 29 chr5 176459351 176461677 -26623855 + L1PA6 LINE L1 1351 3659 -2810 237 33 0 0 chr5 176461677 176461707 -26623825 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 21693 171 36 29 chr5 176461707 176463066 -26622466 + L1PA6 LINE L1 3659 5007 -1462 2339 101 0 0 chr5 176463066 176463372 -26622160 + AluY SINE Alu 1 306 -5 21693 171 36 29 chr5 176463372 176464682 -26620850 + L1PA6 LINE L1 5007 6465 -4 2536 110 18 0 chr5 176464691 176465074 -26620458 + L1PA10 LINE L1 5769 6158 -10 220 318 159 16 chr5 176465396 176465522 -26620010 - MIR3 SINE MIR -16 192 49 290 261 68 62 chr5 176465846 176466007 -26619525 + Charlie8 DNA MER1_type 1 162 -2255 1006 234 0 0 chr5 176466213 176466422 -26619110 + MER6B DNA MER2_type 1 209 -1 505 147 8 8 chr5 176466422 176466551 -26618981 + (TA)n Simple_repeat Simple_repeat 1 129 0 237 113 14 28 chr5 176466562 176466633 -26618899 + (TA)n Simple_repeat Simple_repeat 2 71 0 5207 177 19 16 chr5 176466768 176468373 -26617159 - L1MA9 LINE L1 -9 6303 4695 363 252 126 27 chr5 176469835 176469946 -26615586 + MIR SINE MIR 19 140 -68 439 321 72 10 chr5 176470218 176470427 -26615105 + L2 LINE L2 2998 3219 -94 997 231 29 12 chr5 176470437 176470679 -26614853 + MIR SINE MIR 2 247 -15 232 291 76 13 chr5 176470728 176470807 -26614725 + L2 LINE L2 3230 3313 0 2261 104 3 0 chr5 176471472 176471771 -26613761 + AluSc SINE Alu 1 300 -9 2225 120 3 3 chr5 176472895 176473204 -26612328 - AluSg SINE Alu -1 309 1 1132 177 30 126 chr5 176473301 176473717 -26611815 + MLT1A1 LTR MaLR 1 428 0 2351 102 0 3 chr5 176474153 176474457 -26611075 + AluSq SINE Alu 1 303 -10 250 305 12 12 chr5 176474614 176474696 -26610836 + MIR SINE MIR 171 252 -10 2133 122 0 3 chr5 176474781 176475077 -26610455 - AluY SINE Alu -6 305 11 191 330 34 34 chr5 176475192 176475280 -26610252 - MIR SINE MIR -67 195 108 579 216 94 11 chr5 176475919 176476100 -26609432 - MER105 DNA DNA -5 199 4 642 272 87 59 chr5 176476944 176477198 -26608334 + MIR SINE MIR 2 262 0 383 273 123 5 chr5 176478463 176478650 -26606882 - MIR SINE MIR -7 255 47 261 0 0 0 chr5 176478916 176478945 -26606587 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 432 0 0 0 chr5 176479786 176479834 -26605698 + (CA)n Simple_repeat Simple_repeat 1 48 0 180 363 33 11 chr5 176480973 176481064 -26604468 + L2 LINE L2 3176 3268 -4 21 0 0 0 chr5 176481571 176481592 -26603940 + AT_rich Low_complexity Low_complexity 1 21 0 3670 102 4 2 chr5 176481592 176482123 -26603409 - L1PB2 LINE L1 0 6151 5620 189 321 0 0 chr5 176482222 176482278 -26603254 + MIR SINE MIR 93 148 -114 386 318 87 10 chr5 176483142 176483337 -26602195 - L2 LINE L2 -3 3310 3101 637 345 134 25 chr5 176483406 176483885 -26601647 - L2 LINE L2 -341 2973 2443 458 299 78 37 chr5 176483996 176484240 -26601292 - MIR SINE MIR -8 254 1 522 301 99 33 chr5 176484875 176485088 -26600444 - MIR SINE MIR -34 228 2 568 206 89 20 chr5 176485452 176485598 -26599934 - MER20 DNA MER1_type 0 219 64 403 309 98 5 chr5 176485810 176486014 -26599518 + MIR SINE MIR 21 243 -19 194 340 110 10 chr5 176486550 176486650 -26598882 + MIR SINE MIR 6 115 -147 276 310 0 0 chr5 176487180 176487272 -26598260 - MIR SINE MIR -64 144 63 195 366 11 11 chr5 176487339 176487432 -26598100 + MIR3 SINE MIR 109 201 -7 261 304 35 52 chr5 176487613 176487728 -26597804 + MIR SINE MIR 23 135 -73 1865 130 43 69 chr5 176487732 176488078 -26597454 - MER1B DNA MER1_type 0 337 1 204 259 0 52 chr5 176488277 176488335 -26597197 + MIR3 SINE MIR 115 169 -39 259 230 54 0 chr5 176488434 176488508 -26597024 - MER103 DNA DNA -87 79 2 944 168 13 66 chr5 176489478 176489704 -26595828 - MER20 DNA MER1_type -4 215 2 2321 84 0 0 chr5 176489769 176490056 -26595476 - AluY SINE Alu -11 300 14 348 310 35 25 chr5 176490148 176490351 -26595181 - MLT1L LTR MaLR 0 615 411 377 323 32 43 chr5 176490870 176491056 -26594476 + MIR SINE MIR 46 229 -33 191 371 0 16 chr5 176492066 176492128 -26593404 - MIR SINE MIR -164 98 38 325 300 51 71 chr5 176492294 176492492 -26593040 - MIR SINE MIR -54 208 18 396 307 198 3 chr5 176493365 176493678 -26591854 + L2 LINE L2 2806 3179 -134 255 328 60 0 chr5 176493854 176493921 -26591611 + L2 LINE L2 3242 3312 -1 252 279 0 15 chr5 176493923 176493991 -26591541 + GA-rich Low_complexity Low_complexity 2 68 0 226 241 52 0 chr5 176494203 176494261 -26591271 + L2 LINE L2 2994 3054 -218 373 317 21 11 chr5 176494580 176494766 -26590766 + MER117 DNA MER1_type 9 196 -1 209 222 0 0 chr5 176495031 176495076 -26590456 + (TAA)n Simple_repeat Simple_repeat 3 47 0 2315 138 56 10 chr5 176495227 176495639 -26589893 - MSTB1 LTR MaLR -1 431 1 2614 182 17 4 chr5 176495782 176496299 -26589233 - L1MB7 LINE L1 -19 6165 5642 1060 189 33 29 chr5 176496299 176496401 -26589131 + MER44D DNA MER2_type 2 102 -2389 2204 127 3 0 chr5 176496401 176496700 -26588832 + AluSx SINE Alu 1 300 -12 1060 189 33 29 chr5 176496700 176496841 -26588691 + MER44D DNA MER2_type 102 516 -93 261 176 40 0 chr5 176496905 176496979 -26588553 + (TA)n Simple_repeat Simple_repeat 1 77 0 435 206 0 41 chr5 176496979 176497076 -26588456 + MER44D DNA MER2_type 517 609 0 3120 209 60 9 chr5 176497076 176498283 -26587249 - L1MB7 LINE L1 -530 5644 4372 628 257 21 0 chr5 176499788 176499928 -26585604 + MER58A DNA MER1_type 2 144 0 258 214 145 60 chr5 176500267 176500384 -26585148 + L2 LINE L2 3187 3313 0 252 0 0 0 chr5 176500416 176500444 -26585088 + (TA)n Simple_repeat Simple_repeat 2 29 0 465 345 56 8 chr5 176500465 176500714 -26584818 + MIR SINE MIR 2 262 0 375 308 75 0 chr5 176501364 176501484 -26584048 + MIR SINE MIR 49 177 -85 437 270 162 11 chr5 176501850 176502035 -26583497 + MIR SINE MIR 13 225 -37 263 323 59 67 chr5 176503049 176503303 -26582229 + MIR SINE MIR 1 252 -10 333 264 28 9 chr5 176503514 176503620 -26581912 + MIR3 SINE MIR 88 195 -13 379 359 68 23 chr5 176504107 176504327 -26581205 + MIR SINE MIR 20 249 -13 977 274 84 46 chr5 176504347 176505104 -26580428 - L2 LINE L2 0 3313 2524 41 66 0 0 chr5 176505121 176505197 -26580335 + AT_rich Low_complexity Low_complexity 1 76 0 2086 103 0 14 chr5 176505309 176505600 -26579932 - AluSq SINE Alu -26 287 1 406 354 0 0 chr5 176505646 176505793 -26579739 - MIR SINE MIR -85 177 31 2326 71 0 4 chr5 176506486 176506790 -26578742 + AluY SINE Alu 1 303 0 2091 164 19 12 chr5 176506805 176507221 -26578311 - L1MB3 LINE L1 -14 6169 5751 25 31 0 0 chr5 176507827 176507859 -26577673 + AT_rich Low_complexity Low_complexity 1 32 0 3741 53 0 2 chr5 176507871 176508341 -26577191 - L1PA7 LINE L1 -6 6148 5680 1528 74 65 0 chr5 176508341 176508572 -26576960 + L1P3 LINE L1 5317 5562 -592 404 284 91 14 chr5 176508839 176509269 -26576263 + MER113 DNA MER1_type? 6 518 -3 453 279 150 44 chr5 176509281 176509507 -26576025 - L3 LINE CR1 -162 1415 1166 253 146 0 0 chr5 176509558 176509599 -26575933 - MLT2D LTR ERVL -4 393 353 225 94 0 0 chr5 176509603 176509635 -26575897 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 270 95 0 0 chr5 176509641 176509683 -26575849 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 561 30 0 0 chr5 176509683 176509750 -26575782 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 1044 239 16 12 chr5 176509752 176510003 -26575529 - MLT2D LTR ERVL -72 342 91 543 310 38 24 chr5 176510213 176510426 -26575106 - MIR SINE MIR 0 262 47 2074 120 31 0 chr5 176510426 176510718 -26574814 + AluSx SINE Alu 1 301 -11 382 294 166 6 chr5 176511315 176511478 -26574054 - L3 LINE CR1 -459 1118 930 943 280 116 36 chr5 176511482 176511628 -26573904 - L2 LINE L2 0 3313 3180 2245 84 0 48 chr5 176511628 176511939 -26573593 + AluSx SINE Alu 1 296 -16 943 280 116 36 chr5 176511939 176512423 -26573109 - L2 LINE L2 -133 3180 2631 870 321 71 28 chr5 176512440 176512955 -26572577 - L1M4 LINE L1 -3277 2869 2320 1401 83 25 29 chr5 176512955 176513159 -26572373 - L1PA12 LINE L1 -2 6166 5964 870 321 71 28 chr5 176513159 176513278 -26572254 - L1M4 LINE L1 -3826 2320 2208 2094 121 3 10 chr5 176513351 176513665 -26571867 - AluSx SINE Alu 0 312 1 3570 182 23 10 chr5 176514068 176514776 -26570756 - L1MB5 LINE L1 -10 6164 5448 1788 179 3 13 chr5 176516000 176516307 -26569225 - AluJo SINE Alu -4 308 5 418 270 147 33 chr5 176516347 176516558 -26568974 - MIR SINE MIR -16 246 12 197 309 123 25 chr5 176516676 176516757 -26568775 - MIR SINE MIR -37 225 137 323 276 150 8 chr5 176516757 176516884 -26568648 - MIR SINE MIR -104 158 14 286 297 85 17 chr5 176517775 176517893 -26567639 + MIR SINE MIR 50 175 -87 265 264 45 26 chr5 176518081 176518236 -26567296 + MER103 DNA DNA 7 164 -2 35783 87 11 7 chr5 176518251 176524372 -26561160 - L1PA6 LINE L1 -6 6148 11 25 0 0 0 chr5 176524389 176524414 -26561118 + AT_rich Low_complexity Low_complexity 1 25 0 279 234 0 0 chr5 176525093 176525170 -26560362 + (CA)n Simple_repeat Simple_repeat 2 78 0 609 292 121 66 chr5 176525532 176525987 -26559545 + L2 LINE L2 2324 2803 -511 293 297 116 21 chr5 176526004 176526428 -26559104 + L1M4 LINE L1 4723 5186 -960 207 369 11 20 chr5 176526450 176526596 -26558936 + L2 LINE L2 2854 3060 -253 280 273 13 13 chr5 176527234 176527311 -26558221 - L2 LINE L2 0 3313 3237 230 333 101 10 chr5 176527996 176528095 -26557437 + L3 LINE CR1 1338 1445 -132 3949 183 68 30 chr5 176528183 176529166 -26556366 - L1MC3 LINE L1 -7 7778 6758 339 324 29 44 chr5 176529287 176529423 -26556109 - MIR SINE MIR -113 149 16 220 314 69 49 chr5 176530219 176530321 -26555211 + L2 LINE L2 3186 3289 -24 747 262 11 92 chr5 176530486 176530856 -26554676 + MER58B DNA MER1_type 1 340 -1 342 0 0 0 chr5 176531307 176531345 -26554187 + (TG)n Simple_repeat Simple_repeat 1 38 0 478 311 28 28 chr5 176533076 176533256 -26552276 + CT-rich Low_complexity Low_complexity 1 180 0 204 40 0 0 chr5 176533366 176533391 -26552141 + (CA)n Simple_repeat Simple_repeat 2 26 0 401 262 40 66 chr5 176535386 176535561 -26549971 - MIR SINE MIR -66 142 27 2140 208 58 30 chr5 176535568 176536122 -26549410 + MER90 LTR ERV1 1 611 -3 21 0 0 0 chr5 176536512 176536533 -26548999 + AT_rich Low_complexity Low_complexity 1 21 0 397 339 24 18 chr5 176536786 176536954 -26548578 + L3 LINE CR1 1328 1496 -81 274 74 37 0 chr5 176537198 176537252 -26548280 + (TC)n Simple_repeat Simple_repeat 1 56 0 1476 177 49 26 chr5 176537442 176537795 -26547737 + MLT1A1 LTR MaLR 1 365 0 236 350 19 29 chr5 176538037 176538140 -26547392 + MER5B DNA MER1_type 1 102 -76 522 285 88 26 chr5 176538261 176538489 -26547043 + MIR SINE MIR 7 248 -14 232 254 0 0 chr5 176538496 176538551 -26546981 + (CTA)n Simple_repeat Simple_repeat 2 56 0 616 299 60 24 chr5 176538576 176538827 -26546705 + MIR SINE MIR 2 261 -1 203 383 0 11 chr5 176539380 176539474 -26546058 + MIR SINE MIR 55 147 -61 2193 139 37 6 chr5 176539600 176539952 -26545580 - THE1B LTR MaLR 0 364 2 338 294 130 56 chr5 176540088 176540319 -26545213 - MIR SINE MIR -14 248 1 229 250 48 36 chr5 176540354 176540438 -26545094 - MIR SINE MIR -164 98 14 2067 151 0 0 chr5 176540584 176540889 -26544643 + AluSg SINE Alu 1 305 -5 197 345 35 0 chr5 176541607 176541694 -26543838 + MIR SINE MIR 49 138 -70 204 333 0 0 chr5 176541919 176541982 -26543550 + L3 LINE CR1 1106 1168 -409 333 333 104 22 chr5 176542112 176542334 -26543198 + MIR SINE MIR 13 252 -10 12607 190 44 17 chr5 176542353 176543997 -26541535 - L1MA6 LINE L1 0 7719 6121 2236 88 7 0 chr5 176543997 176544303 -26541229 - AluY SINE Alu -3 308 1 12607 190 44 17 chr5 176544303 176546904 -26538628 - L1MA6 LINE L1 -1598 6121 3314 503 157 47 12 chr5 176547034 176547206 -26538326 + (TA)n Simple_repeat Simple_repeat 2 179 0 40763 51 3 1 chr5 176547377 176553511 -26532021 - L1PA4 LINE L1 -6 6149 2 4032 237 58 6 chr5 176553509 176554743 -26530789 - L1MA6 LINE L1 -4154 3412 2114 * 1357 308 64 32 chr5 176554946 176555569 -26529963 - L1MA6 LINE L1 -6134 1432 790 685 239 31 12 chr5 176555886 176556049 -26529483 + MER5A DNA MER1_type 1 166 -23 836 232 4 69 chr5 176556156 176556271 -26529261 - MIR SINE MIR -4 258 137 222 37 0 0 chr5 176556271 176556298 -26529234 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1803 157 8 0 chr5 176556299 176556566 -26528966 - AluSx SINE Alu -43 269 1 836 232 4 69 chr5 176556566 176556681 -26528851 - MIR SINE MIR -124 138 41 228 257 79 59 chr5 176557959 176558060 -26527472 - L2 LINE L2 -33 3239 3137 471 261 93 0 chr5 176558280 176558441 -26527091 - MLT1K LTR MaLR -2 586 411 501 281 135 27 chr5 176558570 176558755 -26526777 - MLT1K LTR MaLR -358 230 26 1035 271 113 43 chr5 176558894 176559097 -26526435 + L2 LINE L2 2887 3074 -239 1030 198 40 31 chr5 176559097 176559319 -26526213 + MER58A DNA MER1_type 1 224 0 1035 271 113 43 chr5 176559319 176559514 -26526018 + L2 LINE L2 3074 3313 0 252 358 89 54 chr5 176559569 176559974 -26525558 - L2 LINE L2 -667 2647 2229 230 250 19 0 chr5 176560341 176560393 -26525139 + CT-rich Low_complexity Low_complexity 2 54 0 180 0 0 0 chr5 176560914 176560934 -26524598 + (A)n Simple_repeat Simple_repeat 1 20 0 2300 83 3 0 chr5 176561345 176561645 -26523887 - AluY SINE Alu -10 301 1 393 307 79 0 chr5 176562400 176562527 -26523005 + MIR SINE MIR 22 158 -104 222 353 160 17 chr5 176563396 176563515 -26522017 - L2 LINE L2 0 3272 3137 2133 135 0 3 chr5 176563515 176563812 -26521720 - AluSg SINE Alu -14 296 1 199 220 60 0 chr5 176563924 176563974 -26521558 - L2 LINE L2 -216 3056 3004 534 359 85 9 chr5 176564133 176564356 -26521176 - MIR SINE MIR -2 260 21 248 123 108 15 chr5 176564372 176564437 -26521095 - L1MB8 LINE L1 -13 6165 6095 2003 147 0 0 chr5 176564472 176564802 -26520730 + AluSx SINE Alu 1 330 0 1224 184 37 42 chr5 176564844 176565190 -26520342 - MER39 LTR ERV1 -57 650 175 285 238 5 10 chr5 176565223 176565333 -26520199 - LTR48B LTR ERV1 -503 82 1 266 194 39 16 chr5 176565345 176565474 -26520058 + (TA)n Simple_repeat Simple_repeat 2 133 0 184 330 60 10 chr5 176565534 176565634 -26519898 - L2 LINE L2 -509 2805 2701 2407 92 0 0 chr5 176566621 176566927 -26518605 + AluY SINE Alu 1 306 -5 539 242 53 21 chr5 176567523 176567713 -26517819 - Charlie4 DNA MER1_type 0 1961 1766 * 833 242 31 11 chr5 176567710 176567970 -26517562 - Charlie4 DNA MER1_type -1683 278 14 246 181 42 69 chr5 176568021 176568093 -26517439 - L2 LINE L2 -18 3295 3226 774 191 34 57 chr5 176568291 176568500 -26517032 + MER20 DNA MER1_type 16 219 0 209 337 75 48 chr5 176569899 176570086 -26515446 - MIR SINE MIR -70 192 1 2703 138 21 0 chr5 176570234 176570653 -26514879 - MSTA LTR MaLR 0 428 1 306 321 110 29 chr5 176571153 176571362 -26514170 + MIR SINE MIR 37 262 0 337 272 78 0 chr5 176571369 176571472 -26514060 + MIR SINE MIR 104 214 -48 1134 193 5 0 chr5 176571951 176572148 -26513384 - MER58A DNA MER1_type -26 198 1 2403 99 0 3 chr5 176572170 176572483 -26513049 - AluSq SINE Alu -1 312 1 423 281 88 9 chr5 176572549 176572663 -26512869 + L2 LINE L2 3150 3272 0 527 211 9 9 chr5 176572757 176572871 -26512661 - MIR SINE MIR 0 262 149 266 310 0 0 chr5 176573192 176573263 -26512269 + L2 LINE L2 3190 3260 -12 24 0 0 0 chr5 176573781 176573805 -26511727 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 176574309 176574333 -26511199 + AT_rich Low_complexity Low_complexity 1 24 0 334 237 44 67 chr5 176574507 176574642 -26510890 - MLT1K LTR MaLR -343 245 114 614 250 195 5 chr5 176575794 176575994 -26509538 + MIR SINE MIR 17 254 -8 1080 117 46 51 chr5 176576570 176576766 -26508766 + L1PA11 LINE L1 5977 6171 -3 240 35 0 0 chr5 176576774 176576803 -26508729 + (CAA)n Simple_repeat Simple_repeat 2 30 0 641 239 57 25 chr5 176576811 176577094 -26508438 + L1ME1 LINE L1 5861 6112 -54 1558 203 11 7 chr5 176577262 176577548 -26507984 + AluJb SINE Alu 1 287 -25 3190 38 0 0 chr5 176577572 176577972 -26507560 + L1P2 LINE L1 5359 5758 -397 7053 37 0 2 chr5 176580790 176581637 -26503895 + L1PA4 LINE L1 5311 6155 0 26 30 0 0 chr5 176582648 176582681 -26502851 + AT_rich Low_complexity Low_complexity 1 33 0 399 226 11 0 chr5 176583992 176584085 -26501447 + L1MD3 LINE L1 7839 7932 -63 1645 161 36 18 chr5 176584992 176585266 -26500266 + AluJb SINE Alu 19 297 -15 1337 145 13 59 chr5 176585268 176585572 -26499960 + AluSq SINE Alu 1 290 -23 306 0 0 0 chr5 176585583 176585617 -26499915 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 881 191 6 35 chr5 176586300 176586473 -26499059 + AluJo SINE Alu 114 281 -31 3607 208 31 14 chr5 176586506 176587430 -26498102 - L1 LINE L1 -1914 4232 3293 270 0 0 0 chr5 176587471 176587501 -26498031 + (T)n Simple_repeat Simple_repeat 1 30 0 1639 188 60 103 chr5 176588009 176588639 -26496893 - LTR48B LTR ERV1 0 644 1 566 204 7 15 chr5 176588743 176588880 -26496652 - L1MC4a LINE L1 -6 7802 7667 26 30 0 0 chr5 176590192 176590225 -26495307 + AT_rich Low_complexity Low_complexity 1 33 0 1703 42 0 5 chr5 176591238 176591452 -26494080 - L1PA4 LINE L1 -3 6152 5940 1625 110 4 9 chr5 176591469 176591696 -26493836 + AluSx SINE Alu 1 226 -86 8261 55 2 0 chr5 176591699 176592663 -26492869 - LTR5 LTR ERVK -3 966 1 432 126 21 63 chr5 176592663 176592758 -26492774 + AluSx SINE Alu 219 309 0 1285 175 35 0 chr5 176592763 176592991 -26492541 + MER46A DNA MER2_type 1 236 0 309 313 18 9 chr5 176593386 176593498 -26492034 + MIR SINE MIR 1 113 -149 23937 43 9 0 chr5 176594779 176598557 -26486975 + L1PA4 LINE L1 2361 6152 -3 302 331 29 7 chr5 176599070 176599209 -26486323 - L2 LINE L2 -213 3059 2918 2658 97 11 8 chr5 176599495 176599866 -26485666 + THE1C LTR MaLR 1 372 -3 289 216 59 26 chr5 176600082 176600226 -26485306 - MLT1J2 LTR MaLR -312 138 27 267 248 93 62 chr5 176600346 176600636 -26484896 - Tigger7 DNA MER2_type -629 1858 1560 247 186 0 29 chr5 176601625 176601695 -26483837 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 512 248 26 0 chr5 176601699 176601816 -26483716 - MIR SINE MIR -59 203 84 582 297 66 53 chr5 176602078 176602566 -26482966 + L2 LINE L2 1776 2269 -1045 457 199 15 53 chr5 176602632 176602763 -26482769 - MER106A DNA MER1_type -4 232 107 232 256 0 12 chr5 176602773 176602855 -26482677 + (TA)n Simple_repeat Simple_repeat 1 81 0 380 216 0 14 chr5 176602856 176602930 -26482602 - MER106A DNA MER1_type -163 73 1 46 62 0 0 chr5 176602936 176603017 -26482515 + AT_rich Low_complexity Low_complexity 1 81 0 217 136 114 0 chr5 176603251 176603295 -26482237 + L2 LINE L2 3265 3313 0 417 281 124 45 chr5 176604314 176604479 -26481053 + L2 LINE L2 2494 2685 -629 1611 205 30 19 chr5 176604479 176604849 -26480683 - MLT1A2 LTR MaLR 0 374 1 417 281 124 45 chr5 176604849 176604925 -26480607 + L2 LINE L2 2685 2754 -560 2160 132 3 0 chr5 176605015 176605318 -26480214 - AluSg SINE Alu -6 304 1 2415 96 3 0 chr5 176605571 176605883 -26479649 - AluSp SINE Alu 0 313 1 272 284 156 28 chr5 176607223 176607364 -26478168 - MIR3 SINE MIR -11 197 39 394 282 153 24 chr5 176608230 176608400 -26477132 + MIR SINE MIR 65 256 -6 358 343 30 18 chr5 176608491 176608660 -26476872 - MIR SINE MIR -70 192 22 7095 34 0 0 chr5 176611581 176612418 -26473114 + L1PA4 LINE L1 5311 6147 -8 7037 186 49 33 chr5 176612880 176614751 -26470781 - L1PA16 LINE L1 -1 6165 4242 1584 188 3 28 chr5 176614751 176615039 -26470493 + AluJo SINE Alu 1 281 -31 7037 186 49 33 chr5 176615039 176616005 -26469527 - L1PA16 LINE L1 -1924 4242 3293 1665 185 60 103 chr5 176616569 176617199 -26468333 - LTR48B LTR ERV1 0 644 1 566 204 7 15 chr5 176617303 176617440 -26468092 - L1MC4a LINE L1 -6 7802 7667 26 30 0 0 chr5 176618752 176618785 -26466747 + AT_rich Low_complexity Low_complexity 1 33 0 1733 42 0 0 chr5 176619801 176620014 -26465518 - L1PA4 LINE L1 -3 6152 5940 1625 110 4 9 chr5 176620031 176620258 -26465274 + AluSx SINE Alu 1 226 -86 8280 56 1 0 chr5 176620261 176621226 -26464306 - LTR5 LTR ERVK -3 966 1 419 74 11 168 chr5 176621226 176621321 -26464211 - SVA Other Other -450 936 857 62192 3 0 0 chr5 176621321 176628470 -26457062 - HERVK LTR ERVK -95 7148 1 8291 56 1 0 chr5 176628473 176629438 -26456094 - LTR5 LTR ERVK -3 966 1 432 126 21 63 chr5 176629438 176629533 -26455999 + AluSx SINE Alu 219 309 0 1285 175 35 0 chr5 176629538 176629766 -26455766 + MER46A DNA MER2_type 1 236 0 309 313 18 9 chr5 176630161 176630273 -26455259 + MIR SINE MIR 1 113 -149 1228 289 104 69 chr5 176633545 176633822 -26451710 - HAL1 LINE L1 -1386 1121 855 2334 102 0 3 chr5 176633822 176634126 -26451406 - AluSx SINE Alu -9 303 1 1228 289 104 69 chr5 176634126 176634248 -26451284 - HAL1 LINE L1 -1652 855 739 1874 208 56 15 chr5 176634248 176634657 -26450875 - MSTB LTR MaLR 0 426 1 1228 289 104 69 chr5 176634657 176635339 -26450193 - HAL1 LINE L1 -1768 739 1 302 333 35 43 chr5 176635397 176635538 -26449994 + L2 LINE L2 2924 3063 -209 747 261 65 40 chr5 176637610 176637858 -26447674 + MIR SINE MIR 2 256 -6 436 296 64 0 chr5 176639371 176639496 -26446036 - L2 LINE L2 0 3272 3140 315 298 12 50 chr5 176639515 176639676 -26445856 - MIR SINE MIR -5 257 103 4074 43 2 49 chr5 176639700 176640253 -26445279 + L1PA5 LINE L1 5625 6151 -3 661 257 0 55 chr5 176640551 176640734 -26444798 + MER5B DNA MER1_type 1 173 -5 436 263 10 0 chr5 176641825 176641924 -26443608 - MER91B DNA MER1_type -1 189 90 228 204 98 114 chr5 176641941 176642073 -26443459 - MER91B DNA MER1_type -60 130 1 610 289 28 17 chr5 176642671 176642851 -26442681 - MIR3 SINE MIR -9 199 18 302 263 246 18 chr5 176642919 176643033 -26442499 + MIR SINE MIR 15 154 -108 321 237 25 42 chr5 176643397 176643515 -26442017 - LTR28 LTR ERV1 0 1020 905 615 269 112 55 chr5 176643663 176644135 -26441397 - LTR1B LTR ERV1 -298 528 30 336 255 78 20 chr5 176645888 176645990 -26439542 + L2 LINE L2 3200 3307 -6 314 311 38 23 chr5 176646246 176646378 -26439154 + MIR SINE MIR 47 180 -82 422 289 39 26 chr5 176646531 176646687 -26438845 + L2 LINE L2 3156 3313 0 344 326 84 47 chr5 176646950 176647165 -26438367 + L2 LINE L2 2850 3072 -200 878 133 210 15 chr5 176648402 176648597 -26436935 + L1PA13 LINE L1 5926 6158 -5 729 267 42 21 chr5 176648639 176648830 -26436702 - MIR SINE MIR -21 241 47 998 81 40 0 chr5 176650619 176650767 -26434765 - L1PA13 LINE L1 -6 6157 6004 216 194 0 97 chr5 176650904 176650966 -26434566 - MIR SINE MIR -37 225 170 242 324 29 0 chr5 176650999 176651104 -26434428 - LTR67 LTR ERVL -10 547 440 191 344 96 8 chr5 176651385 176651510 -26434022 - MIR SINE MIR -107 155 20 1240 150 22 47 chr5 176651564 176651838 -26433694 + L1MD3 LINE L1 7729 7995 0 881 270 25 21 chr5 176652612 176652849 -26432683 - MIR SINE MIR -10 252 15 198 325 58 32 chr5 176653235 176653389 -26432143 - L2 LINE L2 -1261 2053 1896 2311 116 0 0 chr5 176653477 176653779 -26431753 + AluSx SINE Alu 1 302 -10 521 204 166 0 chr5 176653825 176653982 -26431550 - MER3 DNA MER1_type -21 188 6 1439 194 83 3 chr5 176653996 176654310 -26431222 - MER58B DNA MER1_type -1 340 2 314 267 6 9 chr5 176654790 176654940 -26430592 + MER117 DNA MER1_type 12 197 0 632 137 109 51 chr5 176655021 176655196 -26430336 - L1MC5 LINE L1 -32 7929 7745 202 325 175 0 chr5 176655471 176655631 -26429901 - MIR SINE MIR -12 250 63 207 268 98 12 chr5 176656205 176656287 -26429245 + MIR3 SINE MIR 68 156 -52 411 38 0 0 chr5 176657659 176657712 -26427820 + (TG)n Simple_repeat Simple_repeat 2 54 0 1731 144 127 8 chr5 176657712 176658036 -26427496 + MLT2D LTR ERVL 6 379 -35 771 11 0 0 chr5 176658036 176658124 -26427408 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1731 144 127 8 chr5 176658124 176658160 -26427372 + MLT2D LTR ERVL 379 409 -5 621 196 49 31 chr5 176658235 176658398 -26427134 - MER58B DNA MER1_type -9 332 167 1955 159 0 0 chr5 176659066 176659362 -26426170 - AluSx SINE Alu -16 296 1 455 0 18 0 chr5 176659461 176659516 -26426016 + (CA)n Simple_repeat Simple_repeat 2 57 0 734 217 12 6 chr5 176659653 176659819 -26425713 + L1MB8 LINE L1 6003 6169 -9 269 362 53 56 chr5 176659924 176660280 -26425252 + L2 LINE L2 2864 3218 -54 531 101 0 0 chr5 176660290 176660369 -26425163 + (TGGA)n Simple_repeat Simple_repeat 1 79 0 298 319 54 60 chr5 176661025 176661210 -26424322 - L3 LINE CR1 -21 1556 1373 503 314 109 22 chr5 176661215 176661393 -26424139 + MIR SINE MIR 8 212 -50 369 0 0 0 chr5 176661393 176661434 -26424098 + (CA)n Simple_repeat Simple_repeat 2 42 0 503 314 109 22 chr5 176661434 176661484 -26424048 + MIR SINE MIR 212 256 -6 1600 316 50 23 chr5 176662606 176663215 -26422317 + L2 LINE L2 1075 1705 -1609 1929 177 3 0 chr5 176663215 176663525 -26422007 + AluJo SINE Alu 2 312 0 1600 316 50 23 chr5 176663525 176663580 -26421952 + L2 LINE L2 1705 1757 -1557 1115 292 159 10 chr5 176663586 176663837 -26421695 + L2 LINE L2 2179 2391 -923 180 0 0 0 chr5 176663837 176663857 -26421675 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1115 292 159 10 chr5 176663857 176664101 -26421431 + L2 LINE L2 2391 2748 -566 230 358 56 25 chr5 176664108 176664270 -26421262 - L2 LINE L2 -454 2860 2694 25 0 0 0 chr5 176665243 176665268 -26420264 + AT_rich Low_complexity Low_complexity 1 25 0 2198 209 23 21 chr5 176665288 176665800 -26419732 + LTR40a LTR ERVL 4 516 -3 213 132 0 0 chr5 176665917 176665955 -26419577 + (T)n Simple_repeat Simple_repeat 1 38 0 266 288 12 25 chr5 176666171 176666251 -26419281 - L2 LINE L2 0 3272 3194 867 359 37 19 chr5 176666662 176667125 -26418407 - MLT1K LTR MaLR -115 473 3 364 291 8 24 chr5 176667904 176668031 -26417501 + MLT1I LTR MaLR 102 226 -183 24 0 0 0 chr5 176669727 176669751 -26415781 + AT_rich Low_complexity Low_complexity 1 24 0 255 325 167 17 chr5 176670345 176670465 -26415067 + MIR3 SINE MIR 20 157 -51 696 249 152 18 chr5 176670468 176670810 -26414722 - MER113 DNA MER1_type? 0 521 134 752 230 74 108 chr5 176671310 176671754 -26413778 - MER34B LTR ERV1 -130 412 1 4603 146 68 7 chr5 176672961 176673804 -26411728 - MER4D LTR ERV1 -9 894 1 3844 93 34 0 chr5 176674284 176674820 -26410712 - MER41A LTR ERV1 0 554 1 402 302 122 28 chr5 176675323 176675578 -26409954 + L2 LINE L2 3031 3309 -4 1303 157 109 134 chr5 176675787 176676347 -26409185 - LTR49 LTR ERV1 -49 546 1 2910 203 22 30 chr5 176676608 176677252 -26408280 - MER82 DNA MER2_type -8 645 7 701 305 30 13 chr5 176678152 176678385 -26407147 + MIR SINE MIR 5 241 -21 230 225 135 22 chr5 176678812 176678901 -26406631 - MIR SINE MIR -54 208 110 460 231 88 54 chr5 176679046 176679193 -26406339 + MIR SINE MIR 111 262 0 1864 194 26 34 chr5 176680036 176680504 -26405028 + MER74A LTR ERVL 5 468 -90 190 363 121 0 chr5 176680693 176680784 -26404748 + L2 LINE L2 3133 3234 -38 291 284 32 32 chr5 176680956 176681051 -26404481 + MIR SINE MIR 57 151 -111 934 99 0 8 chr5 176681051 176681182 -26404350 + FLAM_C SINE Alu 1 130 -3 195 224 61 0 chr5 176681195 176681244 -26404288 + MIR SINE MIR 138 189 -73 976 147 5 87 chr5 176681244 176681428 -26404104 + AluJo SINE Alu 5 173 -139 22 0 0 0 chr5 176681429 176681451 -26404081 + AT_rich Low_complexity Low_complexity 1 22 0 259 367 8 8 chr5 176681467 176681595 -26403937 + L2 LINE L2 2924 3051 -221 1527 204 28 6 chr5 176681659 176681922 -26403610 - MLT2D LTR ERVL -47 367 92 187 30 30 30 chr5 176681922 176681955 -26403577 + (TA)n Simple_repeat Simple_repeat 1 33 0 1527 204 28 6 chr5 176681955 176682048 -26403484 - MLT2D LTR ERVL -322 92 3 685 311 109 14 chr5 176682809 176683202 -26402330 - L2 LINE L2 -166 3147 2719 2175 244 247 21 chr5 176683369 176684453 -26401079 - L2 LINE L2 -621 2693 1365 402 307 208 13 chr5 176685186 176685417 -26400115 - L3 LINE CR1 -9 1568 1293 180 343 15 0 chr5 176685848 176685915 -26399617 - L2 LINE L2 -14 3258 3191 774 301 54 52 chr5 176685922 176686405 -26399127 - L2 LINE L2 0 3313 2719 240 35 0 0 chr5 176686405 176686434 -26399098 + (TG)n Simple_repeat Simple_repeat 1 29 0 774 301 54 52 chr5 176686434 176686680 -26398852 - L2 LINE L2 -594 2719 2475 2364 79 0 10 chr5 176686877 176687181 -26398351 + AluY SINE Alu 3 303 -8 386 293 77 28 chr5 176687588 176687769 -26397763 - L2 LINE L2 -876 2438 2249 236 184 237 13 chr5 176687832 176687908 -26397624 + L3 LINE CR1 1480 1572 -5 578 256 15 7 chr5 176689360 176689497 -26396035 + MIR SINE MIR 23 160 -102 1694 135 132 10 chr5 176689596 176689982 -26395550 - MER31A LTR ERV1 -52 433 1 493 266 8 0 chr5 176690526 176690650 -26394882 - MIR SINE MIR -32 230 106 1570 114 18 0 chr5 176690863 176691090 -26394442 + AluSg/x SINE Alu 82 312 0 344 333 9 0 chr5 176692019 176692130 -26393402 + MIR SINE MIR 141 252 -10 15759 176 94 16 chr5 176692777 176698813 -26386719 - L1PA13 LINE L1 -3 7598 5 293 289 99 26 chr5 176699146 176699298 -26386234 + MIR SINE MIR 18 180 -82 21 36 0 0 chr5 176699648 176699676 -26385856 + AT_rich Low_complexity Low_complexity 1 28 0 303 250 216 9 chr5 176699831 176699947 -26385585 + MIR SINE MIR 18 157 -105 216 254 51 76 chr5 176700341 176700459 -26385073 - MIR3 SINE MIR -7 201 87 198 376 74 30 chr5 176701335 176701537 -26383995 - MIR SINE MIR -49 213 3 253 266 54 118 chr5 176701690 176701893 -26383639 + L3 LINE CR1 930 1119 -458 198 246 110 51 chr5 176702324 176702442 -26383090 + MIR3 SINE MIR 36 160 -48 240 191 132 0 chr5 176703329 176703397 -26382135 - MER5B DNA MER1_type -75 103 27 2437 79 0 3 chr5 176704432 176704735 -26380797 - AluY SINE Alu -9 302 1 220 280 65 11 chr5 176705032 176705125 -26380407 + L2 LINE L2 2565 2662 -652 1330 239 107 23 chr5 176705145 176705586 -26379946 - MLT2B2 LTR ERVL -20 534 1 2351 99 3 3 chr5 176705668 176705971 -26379561 - AluSq SINE Alu -10 303 1 682 148 61 9 chr5 176706602 176706717 -26378815 + FLAM_A SINE Alu 1 121 -12 572 286 84 5 chr5 176706751 176707035 -26378497 + MLT2F LTR ERVL 10 339 -324 * 846 218 36 30 chr5 176707028 176707273 -26378259 + MLT2F LTR ERVL 176 655 -8 790 291 65 75 chr5 176707616 176708445 -26377087 + L1ME2 LINE L1 246 1066 -5053 603 325 59 55 chr5 176708475 176708982 -26376550 + L1ME2 LINE L1 1121 1630 -4500 1888 243 67 21 chr5 176709112 176709825 -26375707 + L1ME2 LINE L1 4798 5636 -511 1512 269 61 31 chr5 176709825 176710401 -26375131 - MLT1E LTR MaLR 0 593 1 1888 243 67 21 chr5 176710401 176710929 -26374603 + L1ME2 LINE L1 5636 6138 -9 770 268 148 56 chr5 176710976 176711355 -26374177 + L1MEd LINE L1 2236 2579 -3550 1724 139 105 0 chr5 176711355 176711622 -26373910 - AluSx SINE Alu -15 297 3 770 268 148 56 chr5 176711622 176712099 -26373433 + L1MEd LINE L1 2579 3262 -2867 21 0 0 0 chr5 176712144 176712165 -26373367 + AT_rich Low_complexity Low_complexity 1 21 0 726 273 55 49 chr5 176712452 176712946 -26372586 + L1MEd LINE L1 3648 4144 -1985 1664 122 153 0 chr5 176712964 176713226 -26372306 + AluSq SINE Alu 2 303 0 839 277 124 31 chr5 176713515 176714727 -26370805 + L1MEd LINE L1 4557 5884 -269 2101 122 3 3 chr5 176714949 176715252 -26370280 - AluSx SINE Alu -9 303 1 24 0 0 0 chr5 176715273 176715297 -26370235 + AT_rich Low_complexity Low_complexity 1 24 0 962 140 50 11 chr5 176715583 176715762 -26369770 + MER5A DNA MER1_type 3 188 -1 2558 86 24 16 chr5 176716083 176716455 -26369077 - THE1C LTR MaLR 0 375 1 516 273 75 12 chr5 176717176 176717337 -26368195 + MIR SINE MIR 31 201 -61 1695 184 27 10 chr5 176718828 176719121 -26366411 + AluJo SINE Alu 5 302 -10 408 187 187 30 chr5 176719269 176719435 -26366097 - L1ME1 LINE L1 -21 6145 5954 248 248 46 118 chr5 176719523 176719732 -26365800 - MIR SINE MIR 0 262 2 243 0 0 0 chr5 176719825 176719852 -26365680 + (A)n Simple_repeat Simple_repeat 1 27 0 353 243 103 0 chr5 176721381 176721517 -26364015 - MER103 DNA DNA -16 150 1 375 297 45 9 chr5 176721582 176721693 -26363839 + L2 LINE L2 3191 3305 -8 207 204 0 0 chr5 176722058 176722112 -26363420 + (TG)n Simple_repeat Simple_repeat 1 54 0 228 100 0 0 chr5 176722113 176722153 -26363379 + (TA)n Simple_repeat Simple_repeat 2 41 0 900 271 28 0 chr5 176725161 176725379 -26360153 + MER58A DNA MER1_type 1 224 0 749 243 146 4 chr5 176728122 176728348 -26357184 - MIR SINE MIR 0 262 5 276 216 95 0 chr5 176729012 176729086 -26356446 - MER117 DNA MER1_type -110 87 7 180 0 0 0 chr5 176730048 176730068 -26355464 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 176730270 176730298 -26355234 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 176730312 176730335 -26355197 + AT_rich Low_complexity Low_complexity 1 23 0 188 289 87 67 chr5 176730348 176730497 -26355035 + L2 LINE L2 2454 2605 -709 207 0 0 0 chr5 176731488 176731511 -26354021 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 251 323 63 24 chr5 176733775 176733889 -26351643 + L2 LINE L2 2932 3053 -219 2530 40 0 0 chr5 176733889 176734186 -26351346 + AluY SINE Alu 1 297 -14 251 323 63 24 chr5 176734186 176734198 -26351334 + L2 LINE L2 3053 3063 -209 1990 148 0 16 chr5 176735052 176735355 -26350177 - AluSx SINE Alu -14 298 1 341 274 108 19 chr5 176735816 176735973 -26349559 - MIR SINE MIR -28 234 64 441 290 62 43 chr5 176736073 176736397 -26349135 + L1ME4a LINE L1 5550 5879 -242 1420 202 53 12 chr5 176736810 176737152 -26348380 - MLT1A1 LTR MaLR 0 365 10 2727 84 14 3 chr5 176738278 176738649 -26346883 - THE1C LTR MaLR 0 375 1 1957 143 7 3 chr5 176738990 176739283 -26346249 - AluJb SINE Alu -18 294 1 336 132 0 0 chr5 176739894 176739947 -26345585 + MSTC LTR MaLR 1 53 -375 638 173 173 0 chr5 176740007 176740146 -26345386 + MSTC LTR MaLR 50 212 -216 822 137 0 78 chr5 176740156 176740309 -26345223 + AluJb SINE Alu 172 312 0 206 61 0 30 chr5 176740314 176740347 -26345185 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1065 149 44 48 chr5 176740351 176740579 -26344953 + MSTC LTR MaLR 197 423 -5 225 371 31 0 chr5 176740793 176740890 -26344642 - MIR SINE MIR -120 142 43 290 241 121 24 chr5 176741028 176741111 -26344421 + MIR3 SINE MIR 112 202 -6 468 281 281 17 chr5 176741176 176741471 -26344061 - L2 LINE L2 0 3313 2941 2183 88 6 50 chr5 176742667 176742984 -26342548 + AluSg SINE Alu 1 303 -7 505 324 78 36 chr5 176743036 176743482 -26342050 + L1MEd LINE L1 901 1463 -1027 22 0 0 0 chr5 176743844 176743866 -26341666 + AT_rich Low_complexity Low_complexity 1 22 0 315 342 8 0 chr5 176743890 176744007 -26341525 - L1MC4 LINE L1 -1339 6703 6586 213 267 0 0 chr5 176744018 176744063 -26341469 + (TA)n Simple_repeat Simple_repeat 1 45 0 326 292 11 0 chr5 176744063 176744152 -26341380 - L1MC4 LINE L1 -1339 6703 6614 195 129 0 0 chr5 176744156 176744187 -26341345 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 549 280 48 44 chr5 176744194 176744715 -26340817 + L1MEd LINE L1 2208 2730 -3399 363 62 31 16 chr5 176744748 176744812 -26340720 + (TA)n Simple_repeat Simple_repeat 1 65 0 991 83 14 7 chr5 176744917 176745062 -26340470 - L1PA13 LINE L1 -11 6152 6007 881 174 5 38 chr5 176745062 176745274 -26340258 - L1P LINE L1 -987 5159 4955 233 139 0 0 chr5 176745337 176745373 -26340159 + L1M4 LINE L1 4904 4939 -1207 33320 100 15 13 chr5 176745386 176751508 -26334024 + L1PA6 LINE L1 2 6136 -18 198 0 0 0 chr5 176751509 176751531 -26334001 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 327 49 0 0 chr5 176751530 176751571 -26333961 + (CA)n Simple_repeat Simple_repeat 2 42 0 13496 78 3 6 chr5 176751572 176754193 -26331339 + L1PA6 LINE L1 3515 6147 -7 1421 178 38 48 chr5 176754204 176754842 -26330690 + L1M4 LINE L1 4957 5591 -587 7904 117 18 11 chr5 176754861 176756091 -26329441 + HSMAR1 DNA Mariner 46 1284 -3 2030 107 31 21 chr5 176756136 176756425 -26329107 + AluSx SINE Alu 2 293 -19 444 278 69 49 chr5 176756460 176756705 -26328827 + L1MC/D LINE L1 5254 5503 -739 1949 145 10 10 chr5 176758451 176758755 -26326777 + AluSx SINE Alu 1 304 -8 338 185 12 0 chr5 176758793 176758874 -26326658 + GA-rich Low_complexity Low_complexity 1 82 0 292 308 96 35 chr5 176759173 176759371 -26326161 + MLT1K LTR MaLR 76 285 -303 180 0 0 0 chr5 176759478 176759498 -26326034 + (A)n Simple_repeat Simple_repeat 1 20 0 188 369 73 45 chr5 176760036 176760391 -26325141 + L2 LINE L2 2830 3194 -78 297 103 35 17 chr5 176760538 176760596 -26324936 - MER110A LTR ERV1 -2 466 408 35 24 0 0 chr5 176760600 176760642 -26324890 + AT_rich Low_complexity Low_complexity 1 42 0 1021 221 86 14 chr5 176760678 176760958 -26324574 - LTR49 LTR ERV1 -25 570 271 1193 138 0 10 chr5 176761032 176761228 -26324304 + L1PA8 LINE L1 5979 6172 0 577 123 9 9 chr5 176761234 176761340 -26324192 - LTR49 LTR ERV1 -489 106 1 295 218 13 0 chr5 176761340 176761418 -26324114 - MER110A LTR ERV1 -365 103 25 251 281 52 0 chr5 176761802 176761898 -26323634 + MER117 DNA MER1_type 59 159 -38 183 28 83 0 chr5 176762126 176762162 -26323370 + T-rich Low_complexity Low_complexity 2 40 0 976 132 0 0 chr5 176762189 176762318 -26323214 - AluJb SINE Alu -181 131 3 1072 63 0 0 chr5 176762535 176762677 -26322855 + L1PA4 LINE L1 6012 6153 -2 27 0 0 0 chr5 176762677 176762704 -26322828 + AT_rich Low_complexity Low_complexity 1 27 0 327 125 54 0 chr5 176762956 176763012 -26322520 + MLT1K LTR MaLR 481 539 -49 1081 164 21 125 chr5 176763299 176763635 -26321897 - MER4C LTR ERV1 0 465 165 703 167 107 71 chr5 176763604 176763912 -26321620 - MER4C LTR ERV1 -316 348 1 * 296 297 95 74 chr5 176765903 176766078 -26319454 - MIR SINE MIR -60 148 14 274 314 117 7 chr5 176766106 176766243 -26319289 + L3 LINE CR1 1143 1294 -283 321 325 30 54 chr5 176766327 176766493 -26319039 + L1ME LINE L1 506 667 -5863 304 309 0 71 chr5 176766625 176766697 -26318835 + L1ME LINE L1 1912 1973 -4567 4060 97 9 0 chr5 176766697 176767246 -26318286 - MER41A LTR ERV1 0 554 1 304 309 0 71 chr5 176767246 176767299 -26318233 + L1ME LINE L1 1973 2028 -4512 22 0 0 0 chr5 176767409 176767431 -26318101 + AT_rich Low_complexity Low_complexity 1 22 0 1298 203 24 12 chr5 176767631 176767882 -26317650 + AluJb SINE Alu 47 300 -12 656 269 88 29 chr5 176767949 176768434 -26317098 + L1ME LINE L1 2504 2984 -3556 23548 110 11 12 chr5 176768441 176770299 -26315233 + L1P LINE L1 13 1871 -4275 2351 77 0 13 chr5 176770299 176770598 -26314934 + AluY SINE Alu 2 296 -15 23548 110 11 12 chr5 176770598 176772508 -26313024 + L1P LINE L1 1871 3777 -2369 2208 85 16 47 chr5 176822675 176822992 -26262540 - AluSp SINE Alu -6 307 1 215 269 75 15 chr5 176823307 176823374 -26262158 - MIR SINE MIR -189 73 3 2056 108 17 0 chr5 176823661 176823948 -26261584 - AluSx SINE Alu 0 312 21 23 0 0 0 chr5 176823964 176823987 -26261545 + AT_rich Low_complexity Low_complexity 1 23 0 483 310 22 41 chr5 176824860 176825078 -26260454 - MIR SINE MIR -15 247 33 1304 202 70 24 chr5 176825088 176825460 -26260072 - MLT1B LTR MaLR 0 390 2 310 236 0 0 chr5 176825673 176825728 -26259804 + C-rich Low_complexity Low_complexity 1 55 0 1480 240 88 4 chr5 176825854 176826367 -26259165 - L1ME2 LINE L1 -10 6137 5582 1092 240 79 67 chr5 176826371 176826934 -26258598 + MLT1F1 LTR MaLR 1 567 0 233 241 17 0 chr5 176826939 176826997 -26258535 - L1ME2 LINE L1 -768 5574 5516 1324 235 79 25 chr5 176827006 176827635 -26257897 - L1ME2 LINE L1 -691 5466 4798 626 324 63 47 chr5 176827802 176828249 -26257283 - L1ME2 LINE L1 -4680 1630 1177 643 274 87 76 chr5 176828304 176829018 -26256514 - L1ME2 LINE L1 -5069 1050 329 756 249 37 19 chr5 176829437 176829811 -26255721 - MLT2F LTR ERVL -8 655 196 257 182 36 0 chr5 176829894 176829949 -26255583 - MLT2F LTR ERVL -597 66 10 615 142 80 9 chr5 176829982 176830095 -26255437 - FLAM_A SINE Alu -12 121 1 896 161 40 125 chr5 176830788 176831117 -26254415 - MER4C LTR ERV1 0 465 165 617 167 123 70 chr5 176831087 176831387 -26254145 - MER4C LTR ERV1 -316 348 3 * 256 347 126 18 chr5 176833313 176833480 -26252052 - MIR SINE MIR -44 218 34 184 284 157 22 chr5 176833539 176833673 -26251859 + L3 LINE CR1 1143 1294 -283 230 272 8 64 chr5 176834058 176834118 -26251414 + L1MEc LINE L1 1639 1690 -4706 3704 89 30 0 chr5 176834118 176834656 -26250876 - MER41A LTR ERV1 0 554 1 230 272 8 64 chr5 176834656 176834720 -26250812 + L1MEc LINE L1 1690 1756 -4640 21 0 0 0 chr5 176834816 176834837 -26250695 + AT_rich Low_complexity Low_complexity 1 21 0 1151 207 41 8 chr5 176835033 176835279 -26250253 + AluJb SINE Alu 47 300 -12 438 247 100 24 chr5 176835345 176835820 -26249712 + L1MEc LINE L1 2179 2659 -3556 31775 93 26 9 chr5 176835827 176837648 -26247884 + L1PA6 LINE L1 13 1801 -4353 2094 78 20 14 chr5 176837648 176837941 -26247591 + AluY SINE Alu 2 296 -15 31775 93 26 9 chr5 176837941 176840000 -26245532 + L1PA6 LINE L1 1801 4022 -2132 1961 115 21 0 chr5 176840000 176840287 -26245245 + AluY SINE Alu 1 293 -18 31775 93 26 9 chr5 176840287 176842004 -26243528 + L1PA6 LINE L1 4022 5708 -446 890 36 9 0 chr5 176842004 176842113 -26243419 + L1PA8 LINE L1 6049 6159 -13 30 0 0 0 chr5 176842115 176842145 -26243387 + AT_rich Low_complexity Low_complexity 1 30 0 227 208 13 58 chr5 176842149 176842211 -26243321 + A-rich Low_complexity Low_complexity 1 64 -409 2846 74 27 0 chr5 176842211 176842614 -26242918 + L1PA6 LINE L1 5738 6151 -3 227 208 13 58 chr5 176842614 176842645 -26242887 + A-rich Low_complexity Low_complexity 64 473 0 399 197 26 17 chr5 176842651 176842768 -26242764 + L1MEc LINE L1 2679 2796 -3419 638 239 167 5 chr5 176843118 176843340 -26242192 + MIR SINE MIR 5 262 0 802 262 47 0 chr5 176846025 176846239 -26239293 - MER58A DNA MER1_type 0 224 1 228 100 0 0 chr5 176849187 176849227 -26236305 + (TA)n Simple_repeat Simple_repeat 2 41 0 240 213 0 0 chr5 176849231 176849278 -26236254 + (CA)n Simple_repeat Simple_repeat 1 47 0 303 303 64 9 chr5 176849638 176849747 -26235785 - L2 LINE L2 -8 3305 3191 316 216 128 0 chr5 176849819 176849944 -26235588 + MER103 DNA DNA 10 150 -16 252 0 0 0 chr5 176851442 176851470 -26234062 + (T)n Simple_repeat Simple_repeat 1 28 0 221 221 65 149 chr5 176851561 176851715 -26233817 + MIR SINE MIR 2 142 -120 376 184 203 25 chr5 176851852 176852015 -26233517 + L1ME1 LINE L1 5954 6145 -21 1529 186 46 3 chr5 176852160 176852445 -26233087 - AluJo SINE Alu -11 301 5 474 258 144 26 chr5 176853870 176854064 -26231468 - MIR SINE MIR -15 247 31 2322 90 41 14 chr5 176854770 176855135 -26230397 + THE1C LTR MaLR 1 375 0 931 121 69 12 chr5 176855452 176855625 -26229907 - MER5A DNA MER1_type -4 185 3 24 0 0 0 chr5 176855905 176855929 -26229603 + AT_rich Low_complexity Low_complexity 1 24 0 1881 121 20 3 chr5 176855949 176856246 -26229286 + AluSx SINE Alu 1 302 -10 646 266 146 28 chr5 176856490 176857652 -26227880 - L1ME3A LINE L1 -294 5876 4574 1545 116 171 0 chr5 176857934 176858192 -26227340 - AluSq SINE Alu 0 303 2 545 253 81 55 chr5 176858209 176858680 -26226852 - L1ME3A LINE L1 -1985 4161 3679 313 231 108 23 chr5 176859039 176859169 -26226363 - L1ME3A LINE L1 -2867 3279 3139 449 240 150 87 chr5 176859217 176859507 -26226025 - L1ME3A LINE L1 -3093 3053 2734 1492 142 126 0 chr5 176859507 176859768 -26225764 + AluSx SINE Alu 3 296 -16 449 240 150 87 chr5 176859768 176859843 -26225689 - L1ME3A LINE L1 -3412 2734 2665 23 0 0 0 chr5 176860140 176860163 -26225369 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 176862222 176862246 -26223286 + AT_rich Low_complexity Low_complexity 1 24 0 210 185 0 37 chr5 176863101 176863155 -26222377 + (CATA)n Simple_repeat Simple_repeat 4 55 0 242 303 84 25 chr5 176863532 176863644 -26221888 + L2 LINE L2 2932 3053 -219 2298 38 21 0 chr5 176863644 176863935 -26221597 + AluY SINE Alu 1 297 -14 1763 145 20 17 chr5 176864782 176865079 -26220453 - AluSx SINE Alu -14 298 1 320 250 116 0 chr5 176865573 176865685 -26219847 - MIR SINE MIR -74 188 64 336 289 95 51 chr5 176865783 176866077 -26219455 + L1ME4a LINE L1 5550 5856 -265 1205 197 75 12 chr5 176866505 176866840 -26218692 - MLT1A1 LTR MaLR 0 365 10 26 0 0 0 chr5 176867010 176867036 -26218496 + AT_rich Low_complexity Low_complexity 1 26 0 2425 85 36 3 chr5 176867944 176868307 -26217225 - THE1C LTR MaLR 0 375 1 1792 143 24 3 chr5 176868642 176868929 -26216603 - AluJb SINE Alu -19 293 1 324 135 0 0 chr5 176869527 176869579 -26215953 + MSTC LTR MaLR 1 52 -376 554 172 194 0 chr5 176869638 176869772 -26215760 + MSTC LTR MaLR 50 209 -219 736 126 13 80 chr5 176869784 176869935 -26215597 + FRAM SINE Alu 1 40 0 197 62 0 31 chr5 176869939 176869971 -26215561 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 943 143 62 49 chr5 176869975 176870199 -26215333 + MSTC LTR MaLR 197 423 -5 181 306 20 0 chr5 176870410 176870459 -26215073 - MIR SINE MIR -67 141 92 283 235 136 12 chr5 176870639 176870720 -26214812 + MIR3 SINE MIR 112 202 -6 383 298 298 7 chr5 176870784 176871073 -26214459 - L2 LINE L2 0 3313 2941 1979 87 22 48 chr5 176872245 176872556 -26212976 + AluSg SINE Alu 1 303 -7 369 316 136 58 chr5 176872615 176873065 -26212467 + L1M4c LINE L1 1047 1531 -4853 340 233 34 0 chr5 176873409 176873555 -26211977 + (TA)n Simple_repeat Simple_repeat 2 152 0 319 299 34 0 chr5 176873599 176873716 -26211816 - L1MC4 LINE L1 -1339 6703 6583 428 266 73 45 chr5 176873742 176874249 -26211283 + L1M4c LINE L1 2463 2983 -3399 344 47 47 16 chr5 176874280 176874344 -26211188 + (TA)n Simple_repeat Simple_repeat 2 67 0 910 92 28 0 chr5 176874447 176874589 -26210943 - L1PA13 LINE L1 -11 6152 6007 846 173 14 29 chr5 176874589 176874797 -26210735 - L1P LINE L1 -987 5159 4955 28266 95 33 14 chr5 176874907 176880905 -26204627 + L1PA6 LINE L1 2 6136 -18 198 0 0 0 chr5 176880906 176880928 -26204604 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 278 50 25 0 chr5 176880927 176880967 -26204565 + (CA)n Simple_repeat Simple_repeat 2 42 0 12234 77 22 3 chr5 176880968 176883536 -26201996 + L1PA6 LINE L1 3515 6147 -7 1210 178 52 42 chr5 176883546 176884172 -26201360 + L1M4 LINE L1 4957 5591 -593 7060 119 37 10 chr5 176884190 176885396 -26200136 + HSMAR1 DNA Mariner 46 1284 -3 1812 102 53 21 chr5 176885440 176885723 -26199809 + AluSx SINE Alu 2 293 -19 381 279 69 47 chr5 176885757 176885990 -26199542 + L1MC/D LINE L1 5254 5491 -868 1723 145 27 10 chr5 176887708 176888005 -26197527 + AluSx SINE Alu 1 302 -10 282 165 38 0 chr5 176888043 176888122 -26197410 + GA-rich Low_complexity Low_complexity 1 82 0 248 276 19 38 chr5 176888504 176888609 -26196923 + MLT1K LTR MaLR 183 285 -303 198 0 0 0 chr5 176888714 176888736 -26196796 + (A)n Simple_repeat Simple_repeat 1 22 0 207 363 6 19 chr5 176889030 176889190 -26196342 + GA-rich Low_complexity Low_complexity 6 163 0 204 40 0 0 chr5 176889601 176889626 -26195906 + (T)n Simple_repeat Simple_repeat 1 25 0 258 105 53 18 chr5 176889755 176889812 -26195720 - MER110A LTR ERV1 -2 466 408 35 24 0 0 chr5 176889815 176889857 -26195675 + AT_rich Low_complexity Low_complexity 1 42 0 910 219 106 11 chr5 176889892 176890166 -26195366 - LTR49 LTR ERV1 -25 570 271 1090 112 27 16 chr5 176890239 176890427 -26195105 + L1PA10 LINE L1 5979 6168 0 499 125 29 10 chr5 176890437 176890541 -26194991 - LTR49 LTR ERV1 -489 106 1 258 197 40 0 chr5 176890541 176890617 -26194915 - MER110A LTR ERV1 -365 103 25 242 261 169 14 chr5 176890951 176891093 -26194439 + MER117 DNA MER1_type 1 164 -33 205 186 0 0 chr5 176891306 176891349 -26194183 + T-rich Low_complexity Low_complexity 1 43 0 842 135 24 0 chr5 176891373 176891499 -26194033 - AluJb SINE Alu -181 131 3 957 65 22 0 chr5 176891712 176891851 -26193681 + L1PA4 LINE L1 6012 6153 -2 26 0 0 0 chr5 176891851 176891877 -26193655 + AT_rich Low_complexity Low_complexity 1 26 0 314 127 73 0 chr5 176892124 176892179 -26193353 + MLT1K LTR MaLR 481 539 -49 364 272 25 56 chr5 176892720 176892882 -26192650 + L1M4 LINE L1 3178 3334 -2812 611 118 39 0 chr5 176893549 176893651 -26191881 + U6 snRNA snRNA 1 106 -1 2429 59 21 12 chr5 176893651 176893990 -26191542 + L1PA8 LINE L1 5818 6159 -13 36 23 0 0 chr5 176893990 176894033 -26191499 + AT_rich Low_complexity Low_complexity 1 43 0 618 268 68 45 chr5 176894075 176894426 -26191106 + L1M4c LINE L1 769 1256 -5116 693 202 31 0 chr5 176894583 176894712 -26190820 + FLAM_A SINE Alu 1 133 0 228 216 95 0 chr5 176894716 176894790 -26190742 + L1M4c LINE L1 1543 1623 -4761 351 296 28 9 chr5 176894843 176894951 -26190581 + L1M4c LINE L1 1886 1995 -4568 1445 198 23 13 chr5 176894988 176895291 -26190241 + AluJb SINE Alu 7 312 0 383 275 45 55 chr5 176895294 176895494 -26190038 + L1M4c LINE L1 2036 2233 -4330 1981 177 38 73 chr5 176895670 176896191 -26189341 + MLT1D LTR MaLR 3 505 0 529 260 19 7 chr5 176896241 176896395 -26189137 + ERVL LTR ERVL 1554 1709 -4055 420 226 11 22 chr5 176896473 176896580 -26188952 + (TA)n Simple_repeat Simple_repeat 2 108 -72 1952 159 41 10 chr5 176896580 176896971 -26188561 - MER57A LTR ERV1 0 403 1 420 226 11 22 chr5 176896971 176897044 -26188488 + (TA)n Simple_repeat Simple_repeat 108 180 0 3210 129 48 19 chr5 176897313 176897942 -26187590 + MER39B LTR ERV1 1 647 -6 471 271 72 58 chr5 176897954 176898369 -26187163 + L2 LINE L2 1 3293 -20 426 232 72 106 chr5 176898924 176899161 -26186371 - L2 LINE L2 -6 3307 3079 434 252 194 0 chr5 176899220 176899375 -26186157 + MER5A DNA MER1_type 4 188 -1 184 230 191 34 chr5 176899704 176899913 -26185619 - L2 LINE L2 -260 3053 2812 3016 106 53 71 chr5 176900228 176900706 -26184826 + MER39B LTR ERV1 1 486 -167 2140 75 19 50 chr5 176900706 176901025 -26184507 + AluY SINE Alu 1 309 -2 3016 106 53 71 chr5 176901025 176901122 -26184410 + MER39B LTR ERV1 486 565 -88 1045 158 181 68 chr5 176901122 176901388 -26184144 + AluJo SINE Alu 2 297 -5 3016 106 53 71 chr5 176901388 176901455 -26184077 + MER39B LTR ERV1 565 632 -21 181 180 45 135 chr5 176901534 176901623 -26183909 - L2 LINE L2 -1 3271 3191 1681 90 29 0 chr5 176901929 176902173 -26183359 - AluSp SINE Alu -4 309 59 325 275 55 9 chr5 176902446 176902555 -26182977 - L3b LINE CR1 -140 1443 1330 238 266 91 34 chr5 176902932 176903050 -26182482 + MIR3 SINE MIR 56 179 -29 271 130 0 0 chr5 176903567 176903613 -26181919 + Charlie8 DNA MER1_type 109 154 -2263 1631 171 16 16 chr5 176905823 176906133 -26179399 + AluJo SINE Alu 1 310 -2 392 215 78 34 chr5 176906207 176906412 -26179120 + HAL1b LINE L1 605 818 -530 282 213 106 64 chr5 176906511 176906605 -26178927 - L2 LINE L2 -7 3265 3168 289 266 64 0 chr5 176906708 176906802 -26178730 - MIR SINE MIR -38 224 125 209 206 0 16 chr5 176906885 176906948 -26178584 + GA-rich Low_complexity Low_complexity 3 64 0 4573 149 30 7 chr5 176906984 176907935 -26177597 + L1PA13 LINE L1 4391 5363 -783 839 77 17 8 chr5 176907938 176908055 -26177477 + AluSc SINE Alu 172 289 -20 4858 92 25 5 chr5 176908056 176908845 -26176687 + L1PA13 LINE L1 5359 6163 0 946 275 83 29 chr5 176908900 176909380 -26176152 + MLT1J LTR MaLR 6 511 0 188 322 122 0 chr5 176909964 176910054 -26175478 - L2 LINE L2 -3 3269 3169 350 306 83 0 chr5 176910142 176910299 -26175233 - MIR SINE MIR -25 237 68 186 239 15 75 chr5 176910692 176910759 -26174773 - L2 LINE L2 -338 2975 2913 338 271 66 0 chr5 176911321 176911472 -26174060 + L1MC2 LINE L1 5504 5664 -457 723 173 92 27 chr5 176911474 176911659 -26173873 + AluJo SINE Alu 1 197 -115 1670 152 24 14 chr5 176911843 176912139 -26173393 + AluJb SINE Alu 6 304 -8 922 230 75 0 chr5 176912864 176913186 -26172346 + L1MA7 LINE L1 5946 6291 0 234 91 0 0 chr5 176913279 176913312 -26172220 + (CA)n Simple_repeat Simple_repeat 2 34 0 2027 125 23 0 chr5 176913327 176913630 -26171902 - AluSx SINE Alu -2 310 1 1102 269 70 33 chr5 176914270 176915047 -26170485 + L2 LINE L2 2478 3284 -29 206 132 0 26 chr5 176915143 176915181 -26170351 + (TCC)n Simple_repeat Simple_repeat 3 39 0 2020 90 45 3 chr5 176915469 176915758 -26169774 - AluSq SINE Alu -4 309 9 1178 153 46 161 chr5 176916145 176916255 -26169277 + L1MC2 LINE L1 5857 5978 -366 402 104 65 0 chr5 176916255 176916330 -26169202 + L1MB4 LINE L1 6092 6173 -7 1283 152 27 118 chr5 176916330 176916659 -26168873 - AluSx SINE Alu -2 300 2 1178 153 46 161 chr5 176916659 176916903 -26168629 + L1MC2 LINE L1 5977 6134 -210 1797 135 21 3 chr5 176916903 176917225 -26168307 + AluJb SINE Alu 1 327 0 1178 153 46 161 chr5 176917225 176917407 -26168125 + L1MC2 LINE L1 6134 6335 -9 828 291 137 26 chr5 176918390 176919044 -26166488 - L2 LINE L2 -7 3306 2580 212 279 13 63 chr5 176919100 176919179 -26166353 + MER91 DNA MER1_type 66 140 -56 393 308 101 15 chr5 176919300 176919498 -26166034 - L2 LINE L2 -785 2529 2315 802 179 14 0 chr5 176920118 176920258 -26165274 - FLAM_C SINE Alu -1 142 1 279 228 141 11 chr5 176920463 176920555 -26164977 + MIR SINE MIR 45 148 -60 1191 130 31 55 chr5 176920823 176920889 -26164643 + L1MC2 LINE L1 6088 6154 -190 1945 137 3 3 chr5 176920889 176921217 -26164315 + AluJb SINE Alu 1 328 0 1191 130 31 55 chr5 176921217 176921403 -26164129 + L1MC2 LINE L1 6154 6335 -9 189 350 38 0 chr5 176921619 176921699 -26163833 - L2 LINE L2 -13 3300 3218 972 293 119 29 chr5 176922406 176923073 -26162459 - L2 LINE L2 -7 3306 2580 201 275 12 75 chr5 176923131 176923211 -26162321 + MER91 DNA MER1_type 66 140 -56 418 270 116 42 chr5 176923296 176923537 -26161995 - L2 LINE L2 -741 2573 2315 875 147 0 47 chr5 176924162 176924312 -26161220 - FLAM_C SINE Alu 0 143 1 330 223 117 11 chr5 176924521 176924615 -26160917 + MIR SINE MIR 45 148 -60 361 255 71 0 chr5 176924891 176924989 -26160543 - MIR3 SINE MIR -27 181 77 247 273 0 0 chr5 176924987 176925042 -26160490 + MIR3 SINE MIR 108 162 -46 * 419 271 49 14 chr5 176925520 176925664 -26159868 - MLT1J LTR MaLR -44 467 319 3617 275 126 17 chr5 176925895 176927214 -26158318 - L2 LINE L2 -913 2401 921 1771 144 63 44 chr5 176927214 176927581 -26157951 - THE1C LTR MaLR -1 374 1 3617 275 126 17 chr5 176927581 176927773 -26157759 - L2 LINE L2 -2393 921 751 1502 193 65 24 chr5 176928038 176928375 -26157157 + MLT1A2 LTR MaLR 23 373 -1 227 133 44 22 chr5 176928376 176928421 -26157111 + L2 LINE L2 776 821 -2493 327 335 90 7 chr5 176928534 176928689 -26156843 + MIR SINE MIR 47 214 -48 1876 149 21 3 chr5 176928697 176928986 -26156546 - AluSx SINE Alu -18 294 1 1526 177 3 28 chr5 176929039 176929321 -26156211 + AluJo SINE Alu 1 275 -37 555 66 0 0 chr5 176929321 176929397 -26156135 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 224 200 75 100 chr5 176929444 176929478 -26156054 + MIR SINE MIR 170 203 -59 1066 219 23 0 chr5 176929478 176929697 -26155835 + MER58A DNA MER1_type 1 224 0 224 200 75 100 chr5 176929697 176929742 -26155790 + MIR SINE MIR 203 247 -15 6034 195 34 30 chr5 176930115 176931214 -26154318 + L1M3f LINE L1 88 1181 -4998 1470 193 62 0 chr5 176931214 176931331 -26154201 + AluJb SINE Alu 1 109 -203 531 31 0 0 chr5 176931331 176931396 -26154136 + (CA)n Simple_repeat Simple_repeat 2 66 0 1470 193 62 0 chr5 176931396 176931606 -26153926 + AluJb SINE Alu 109 312 0 6034 195 34 30 chr5 176931606 176931617 -26153915 + L1M3f LINE L1 1181 1190 -4989 1634 169 0 4 chr5 176931617 176931883 -26153649 + AluSx SINE Alu 37 301 -11 6034 195 34 30 chr5 176931883 176932455 -26153077 + L1M3f LINE L1 1190 1758 -4421 2186 128 3 0 chr5 176932455 176932751 -26152781 - AluSx SINE Alu -10 302 6 6034 195 34 30 chr5 176932751 176932777 -26152755 + L1M3f LINE L1 1758 1782 -4397 183 80 0 0 chr5 176932777 176932802 -26152730 + (CCA)n Simple_repeat Simple_repeat 1 25 0 6034 195 34 30 chr5 176932802 176933047 -26152485 + L1M3f LINE L1 1782 2047 -4132 29 0 0 0 chr5 176935543 176935572 -26149960 + AT_rich Low_complexity Low_complexity 1 29 0 6156 200 63 18 chr5 176936512 176938556 -26146976 + L1M3f LINE L1 2143 4281 -2047 3608 205 39 5 chr5 176938721 176939771 -26145761 - L1 LINE L1 -3093 4472 3384 29 0 0 0 chr5 176940740 176940769 -26144763 + AT_rich Low_complexity Low_complexity 1 29 0 5715 168 45 31 chr5 176941224 176942531 -26143001 + L1 LINE L1 3127 4451 -1695 999 223 13 9 chr5 176942532 176942756 -26142776 - MER82 DNA MER2_type -427 226 2 197 159 23 0 chr5 176942756 176942800 -26142732 + (TA)n Simple_repeat Simple_repeat 1 45 0 643 210 42 0 chr5 176942814 176942957 -26142575 - Charlie1a DNA MER1_type -1230 225 77 1874 155 10 0 chr5 176943029 176943325 -26142207 + AluSx SINE Alu 3 301 -11 1110 163 71 46 chr5 176943677 176943960 -26141572 + L1M3f LINE L1 4344 4633 -1695 750 237 36 9 chr5 176943961 176944180 -26141352 - MER82 DNA MER2_type -427 226 2 206 211 18 18 chr5 176944180 176944237 -26141295 + (TA)n Simple_repeat Simple_repeat 1 57 0 524 214 64 0 chr5 176944237 176944377 -26141155 - Charlie1a DNA MER1_type -1230 225 77 1630 159 31 0 chr5 176944448 176944738 -26140794 + AluSx SINE Alu 3 301 -11 1640 142 16 54 chr5 176944928 176945302 -26140230 - AluJb SINE Alu 0 370 9 22 0 0 0 chr5 176945519 176945541 -26139991 + AT_rich Low_complexity Low_complexity 1 22 0 200 324 88 64 chr5 176947070 176947165 -26138367 + L3 LINE CR1 1253 1344 -233 1796 108 23 49 chr5 176947165 176947472 -26138060 + AluSq SINE Alu 1 299 -14 200 324 88 64 chr5 176947472 176947580 -26137952 + L3 LINE CR1 1344 1461 -116 230 0 33 0 chr5 176948129 176948159 -26137373 + (TG)n Simple_repeat Simple_repeat 1 31 0 197 33 33 0 chr5 176948161 176948191 -26137341 + (GA)n Simple_repeat Simple_repeat 2 32 0 237 33 0 0 chr5 176948191 176948221 -26137311 + (TG)n Simple_repeat Simple_repeat 2 31 0 481 313 121 51 chr5 176948265 176948777 -26136755 + HAL1b LINE L1 66 613 -735 249 229 18 119 chr5 176948800 176948865 -26136667 + MER5A DNA MER1_type 12 63 -126 1824 138 30 0 chr5 176948865 176949162 -26136370 + AluSx SINE Alu 1 306 -6 249 229 18 119 chr5 176949162 176949205 -26136327 + MER5A DNA MER1_type 63 109 -80 485 338 102 27 chr5 176949606 176950195 -26135337 + L1 LINE L1 2201 2833 -3313 766 144 14 22 chr5 176950332 176950471 -26135061 + FLAM_C SINE Alu 1 138 -5 227 151 0 103 chr5 176950593 176950719 -26134813 + A-rich Low_complexity Low_complexity 6 118 0 351 241 55 72 chr5 176950721 176950944 -26134588 + L1 LINE L1 3071 3290 -2856 618 210 17 0 chr5 176950953 176951072 -26134460 + AluJb SINE Alu 12 132 -180 1581 185 17 0 chr5 176951711 176952009 -26133523 + AluJo SINE Alu 1 303 -9 451 249 118 6 chr5 176952111 176952280 -26133252 - L2 LINE L2 -211 3102 2915 1134 197 77 36 chr5 176953192 176953508 -26132024 - AluJo SINE Alu 0 327 1 981 259 96 24 chr5 176953522 176954024 -26131508 + L1MC4a LINE L1 5350 5887 -1921 231 330 33 22 chr5 176954143 176954234 -26131298 - MIR SINE MIR -166 96 5 1638 152 0 53 chr5 176955006 176955289 -26130243 - AluJb SINE Alu -36 276 9 23 0 0 0 chr5 176955510 176955533 -26129999 + AT_rich Low_complexity Low_complexity 1 23 0 297 344 26 11 chr5 176957069 176957258 -26128274 + HAL1b LINE L1 422 613 -735 207 0 0 0 chr5 176957291 176957314 -26128218 + (CAG)n Simple_repeat Simple_repeat 1 23 0 2035 142 10 0 chr5 176957347 176957650 -26127882 + AluSx SINE Alu 1 306 -6 207 250 0 0 chr5 176957650 176957694 -26127838 + MER5A DNA MER1_type 66 109 -80 231 253 134 35 chr5 176958106 176958308 -26127224 + L1P LINE L1 2202 2423 -3723 830 125 0 31 chr5 176958844 176958972 -26126560 + AluJb SINE Alu 1 124 -188 1810 171 0 16 chr5 176961614 176961930 -26123602 + AluJo SINE Alu 1 311 -1 494 232 53 34 chr5 176962004 176962211 -26123321 + HAL1b LINE L1 603 813 -535 258 158 95 42 chr5 176962225 176962320 -26123212 + HAL1b LINE L1 879 978 -370 285 235 111 0 chr5 176962330 176962411 -26123121 - L2 LINE L2 -15 3257 3168 320 281 42 0 chr5 176962517 176962613 -26122919 - MIR SINE MIR -38 224 125 189 107 0 0 chr5 176962731 176962759 -26122773 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 5416 152 11 8 chr5 176962798 176963768 -26121764 + L1PA13 LINE L1 4391 5363 -783 924 76 0 8 chr5 176963771 176963890 -26121642 + AluSc SINE Alu 172 289 -20 5623 97 4 6 chr5 176963891 176964698 -26120834 + L1PA13 LINE L1 5359 6163 0 1215 285 67 25 chr5 176964766 176965243 -26120289 + MLT1J LTR MaLR 15 511 0 188 316 95 11 chr5 176965839 176965934 -26119598 - L2 LINE L2 -3 3310 3208 439 301 40 0 chr5 176966451 176966624 -26118908 + L1ME LINE L1 5485 5664 -457 850 191 63 21 chr5 176966626 176966815 -26118717 + AluJo SINE Alu 1 197 -115 1859 156 7 13 chr5 176966998 176967305 -26118227 + AluJb SINE Alu 1 305 -7 208 269 0 0 chr5 176967324 176967376 -26118156 + (TA)n Simple_repeat Simple_repeat 1 52 0 1194 231 52 0 chr5 176968044 176968373 -26117159 + L1MA7 LINE L1 5946 6291 0 249 159 0 0 chr5 176968468 176968512 -26117020 + (CA)n Simple_repeat Simple_repeat 2 45 0 2173 137 3 0 chr5 176968517 176968823 -26116709 - AluSx SINE Alu -2 310 4 308 271 101 50 chr5 176968960 176969159 -26116373 + MLT1J LTR MaLR 303 511 0 1195 279 56 33 chr5 176969479 176970272 -26115260 + L2 LINE L2 2478 3284 -29 2201 108 27 0 chr5 176970707 176971004 -26114528 - AluSq SINE Alu -8 305 1 567 140 61 0 chr5 176971394 176971508 -26114024 + L1MC3 LINE L1 5857 5977 -1808 436 104 52 0 chr5 176971508 176971583 -26113949 + L1MB4 LINE L1 6093 6173 -7 1234 183 9 108 chr5 176971583 176971916 -26113616 - AluJo SINE Alu -12 300 1 24 32 0 0 chr5 176972191 176972222 -26113310 + AT_rich Low_complexity Low_complexity 1 31 0 416 261 74 28 chr5 176972322 176972498 -26113034 + L1MC4a LINE L1 3086 3269 -2877 695 207 0 0 chr5 176972539 176972660 -26112872 + AluJb SINE Alu 12 132 -180 189 74 0 0 chr5 176973149 176973176 -26112356 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1756 189 0 0 chr5 176973313 176973614 -26111918 + AluJb SINE Alu 1 301 -11 522 243 98 12 chr5 176973721 176973894 -26111638 - L2 LINE L2 -211 3102 2915 315 285 201 40 chr5 176974358 176974712 -26110820 + L1MC4a LINE L1 4795 5205 -941 1212 209 58 36 chr5 176974825 176975147 -26110385 - AluJo SINE Alu 0 328 1 1113 275 81 30 chr5 176975165 176975674 -26109858 + L1MC4a LINE L1 5353 5887 -1921 291 366 0 11 chr5 176975795 176975888 -26109644 - MIR SINE MIR -166 96 5 3532 125 77 27 chr5 176976409 176976463 -26109069 - MER39B LTR ERV1 0 653 603 1729 161 29 14 chr5 176976463 176976772 -26108760 + AluJo SINE Alu 1 313 0 3532 125 77 27 chr5 176976772 176977338 -26108194 - MER39B LTR ERV1 -50 603 1 241 200 18 0 chr5 176977816 176977871 -26107661 + MLT1L LTR MaLR 23 78 -537 756 274 52 49 chr5 176977893 176978222 -26107310 + MLT1J LTR MaLR 109 438 -73 2625 144 36 7 chr5 176978226 176978642 -26106890 + MSTA LTR MaLR 1 428 0 2173 109 0 0 chr5 176978876 176979209 -26106323 + AluY SINE Alu 1 333 0 469 247 84 57 chr5 176979494 176979721 -26105811 - MIR SINE MIR -12 250 18 237 275 29 14 chr5 176980135 176980204 -26105328 + MLT1-int LTR MaLR 1040 1109 -262 408 264 130 59 chr5 176980596 176980835 -26104697 + L1MEd LINE L1 551 806 -5313 297 261 43 117 chr5 176981135 176981595 -26103937 + L1MEd LINE L1 701 1126 -4993 282 310 157 19 chr5 176981654 176981915 -26103617 + L1M4 LINE L1 3865 4161 -1985 1575 260 125 52 chr5 176981921 176982687 -26102845 + L1MC4 LINE L1 6711 7532 -510 7503 46 16 0 chr5 176982706 176984003 -26101529 - L1PA7 LINE L1 -2 6152 4845 2598 101 44 0 chr5 176984003 176984390 -26101142 + L1PA7 LINE L1 4459 4862 -1284 1119 188 15 70 chr5 176984434 176984666 -26100866 + L1MD3 LINE L1 7730 7946 -49 1871 169 3 0 chr5 176984666 176984961 -26100571 - AluSx SINE Alu -16 296 1 1119 188 15 70 chr5 176984961 176985000 -26100532 + L1MD3 LINE L1 7946 7986 -9 855 259 70 4 chr5 176985035 176985305 -26100227 + L1MC4 LINE L1 7563 7850 -192 615 249 31 67 chr5 176985392 176985617 -26099915 - MER21A LTR ERV1 -137 794 578 1079 170 62 5 chr5 176985638 176985832 -26099700 - MER2 DNA MER2_type -139 206 2 806 260 28 108 chr5 176985855 176986320 -26099212 - MER21B LTR ERV1 -415 448 21 292 346 13 13 chr5 176986806 176986959 -26098573 + L1M4 LINE L1 4641 4793 -1353 811 258 93 16 chr5 176986979 176987227 -26098305 - MLT1L LTR MaLR 0 615 349 231 255 0 0 chr5 176987345 176987396 -26098136 - MLT1L LTR MaLR -423 192 142 285 327 173 0 chr5 176987601 176987769 -26097763 - MIR SINE MIR -6 256 60 507 242 8 183 chr5 176989132 176989235 -26096297 - MIR SINE MIR -7 255 167 303 109 0 0 chr5 176989235 176989281 -26096251 + MADE1 DNA Mariner 35 80 0 507 242 8 183 chr5 176989281 176989384 -26096148 - MIR SINE MIR -95 167 48 188 278 84 89 chr5 176989500 176989691 -26095841 + MIR SINE MIR 31 220 -42 2348 112 0 0 chr5 176989901 176990213 -26095319 + AluSx SINE Alu 1 312 0 24 32 0 0 chr5 176990783 176990814 -26094718 + AT_rich Low_complexity Low_complexity 1 31 0 2167 95 3 0 chr5 176990865 176991171 -26094361 + AluY SINE Alu 2 308 0 639 294 68 35 chr5 176991425 176992018 -26093514 - L2 LINE L2 -74 3239 2628 937 246 30 0 chr5 176992020 176992223 -26093309 + MER58A DNA MER1_type 1 209 -15 205 233 23 0 chr5 176992294 176992337 -26093195 - L2 LINE L2 -3 3310 3267 288 273 116 97 chr5 176992680 176993094 -26092438 + MLT1K LTR MaLR 157 578 -10 2846 152 113 14 chr5 176993194 176993707 -26091825 + MER34B LTR ERV1 1 564 -1 193 284 230 0 chr5 176993889 176993963 -26091569 + MIR3 SINE MIR 66 156 -52 1583 172 44 27 chr5 176994444 176994741 -26090791 + AluJo SINE Alu 1 302 -10 355 261 94 57 chr5 176994834 176995030 -26090502 - MER20 DNA MER1_type 0 219 15 335 326 23 23 chr5 176995038 176995170 -26090362 - MIR SINE MIR -61 147 16 181 54 0 54 chr5 176997066 176997103 -26088429 + (CAA)n Simple_repeat Simple_repeat 2 36 0 270 0 0 0 chr5 176997233 176997263 -26088269 + (TG)n Simple_repeat Simple_repeat 2 31 0 198 0 0 0 chr5 176997661 176997683 -26087849 + (T)n Simple_repeat Simple_repeat 1 22 0 1461 194 0 35 chr5 176997757 176998040 -26087492 + AluJo SINE Alu 1 273 -39 2015 122 22 19 chr5 176998060 176998371 -26087161 + AluSx SINE Alu 1 312 0 1332 172 228 0 chr5 176998380 176998648 -26086884 + LTR69 LTR ERVL 34 362 -226 2660 78 33 11 chr5 176998648 176999008 -26086524 + L1PA11 LINE L1 5807 6174 0 196 274 131 70 chr5 176999164 176999492 -26086040 - L2 LINE L2 -423 2891 2544 296 304 69 10 chr5 177000259 177000463 -26085069 + L1MC4a LINE L1 5722 5937 -1871 2090 121 0 32 chr5 177001046 177001360 -26084172 + AluSx SINE Alu 1 304 -8 311 205 231 17 chr5 177001690 177001807 -26083725 + MER5A DNA MER1_type 40 181 -8 188 264 11 55 chr5 177002113 177002204 -26083328 + MIR3 SINE MIR 95 181 -27 219 356 163 9 chr5 177002647 177002880 -26082652 - L3 LINE CR1 -8 1569 1301 2324 84 3 0 chr5 177002962 177003260 -26082272 - AluY SINE Alu -12 299 1 727 289 66 0 chr5 177004409 177004651 -26080881 + MIR SINE MIR 4 261 -1 1955 158 26 3 chr5 177004989 177005292 -26080240 - AluSx SINE Alu -2 310 1 1950 118 4 4 chr5 177005575 177005845 -26079687 + AluSp SINE Alu 1 270 -43 222 352 64 8 chr5 177005954 177006079 -26079453 - L3 LINE CR1 -19 1558 1427 639 255 125 82 chr5 177006083 177006499 -26079033 - MLT1K LTR MaLR -4 584 151 2159 108 0 65 chr5 177006573 177006898 -26078634 + AluSx SINE Alu 1 304 -8 527 276 21 7 chr5 177007010 177007155 -26078377 - L3 LINE CR1 -228 1349 1203 1674 177 47 7 chr5 177007242 177007541 -26077991 - AluJb SINE Alu -1 311 1 28 0 0 0 chr5 177007611 177007639 -26077893 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr5 177007761 177007807 -26077725 + AT_rich Low_complexity Low_complexity 1 46 0 300 292 29 81 chr5 177008157 177008366 -26077166 + L1MC4a LINE L1 596 793 -5326 4562 175 29 62 chr5 177008568 177008622 -26076910 + L1MB4 LINE L1 4918 4972 -1208 387 0 0 0 chr5 177008622 177008665 -26076867 + (TG)n Simple_repeat Simple_repeat 2 44 0 2144 109 3 30 chr5 177008667 177008970 -26076562 - AluSx SINE Alu -17 295 1 4562 175 29 62 chr5 177008970 177009530 -26076002 + L1MB4 LINE L1 4973 5550 -630 2112 142 6 10 chr5 177009530 177009841 -26075691 + AluSx SINE Alu 3 312 0 4562 175 29 62 chr5 177009841 177010513 -26075019 + L1MB4 LINE L1 5550 6153 -27 1134 271 106 46 chr5 177010572 177010762 -26074770 + L1MC4a LINE L1 895 1072 -5238 1708 160 45 4 chr5 177010762 177011030 -26074502 + AluSx SINE Alu 2 280 -32 1037 77 24 12 chr5 177011030 177011200 -26074332 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 1134 271 106 46 chr5 177011200 177011687 -26073845 + L1MC4a LINE L1 1072 1529 -4781 1885 185 0 0 chr5 177011687 177011995 -26073537 + AluJb SINE Alu 5 312 0 1134 271 106 46 chr5 177011995 177012127 -26073405 + L1MC4a LINE L1 1529 1652 -4658 2630 42 3 6 chr5 177012127 177012439 -26073093 + AluY SINE Alu 1 311 0 1134 271 106 46 chr5 177012439 177012879 -26072653 + L1MC4a LINE L1 1652 2262 -4048 634 283 91 66 chr5 177012875 177013359 -26072173 + L1MC4a LINE L1 5493 5988 -1803 * 2039 114 32 41 chr5 177013541 177013856 -26071676 + AluSx SINE Alu 1 312 0 222 62 0 0 chr5 177013918 177013950 -26071582 + (CA)n Simple_repeat Simple_repeat 2 33 0 356 78 20 0 chr5 177014317 177014368 -26071164 + AluSp/q SINE Alu 154 205 -98 224 326 39 47 chr5 177014398 177014423 -26071109 + L3 LINE CR1 884 908 -669 1444 184 69 24 chr5 177014423 177014711 -26070821 - AluJo SINE Alu -11 301 1 224 326 39 47 chr5 177014711 177014814 -26070718 + L3 LINE CR1 908 1011 -566 779 185 0 23 chr5 177014872 177015002 -26070530 + FLAM_C SINE Alu 1 127 -6 894 219 15 15 chr5 177015022 177015227 -26070305 - L1MB8 LINE L1 -1 6177 5973 909 205 0 6 chr5 177015231 177015397 -26070135 - AluJb SINE Alu -11 301 137 1873 214 136 22 chr5 177015424 177015540 -26069992 - L1ME3A LINE L1 -221 5949 5848 207 0 0 0 chr5 177015540 177015563 -26069969 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 2174 99 0 14 chr5 177015563 177015847 -26069685 - AluSx SINE Alu -32 280 1 1873 214 136 22 chr5 177015847 177016319 -26069213 - L1ME3A LINE L1 -321 5849 5293 708 321 137 10 chr5 177016320 177016713 -26068819 + L3 LINE CR1 1088 1530 -47 1998 131 3 0 chr5 177016750 177017032 -26068500 + AluSx SINE Alu 1 283 -29 663 301 65 9 chr5 177017331 177017547 -26067985 - MIR SINE MIR -15 247 20 192 152 0 0 chr5 177018090 177018123 -26067409 + CT-rich Low_complexity Low_complexity 2 34 0 1688 132 99 4 chr5 177018280 177018403 -26067129 + AluJb SINE Alu 1 111 -201 222 37 0 0 chr5 177018403 177018430 -26067102 + (CA)n Simple_repeat Simple_repeat 2 28 0 1688 132 99 4 chr5 177018430 177018578 -26066954 + AluJb SINE Alu 111 298 -14 4233 123 50 0 chr5 177018682 177019265 -26066267 + LTR9 LTR ERV1 1 612 0 502 281 14 14 chr5 177019457 177019625 -26065907 + MIR SINE MIR 95 261 -1 307 238 119 20 chr5 177019713 177019814 -26065718 + MIR SINE MIR 36 146 -62 362 263 25 25 chr5 177020208 177020326 -26065206 + L2 LINE L2 3153 3270 -2 253 243 135 45 chr5 177020407 177020518 -26065014 + MLT1L LTR MaLR 126 246 -369 1268 172 9 18 chr5 177020600 177020827 -26064705 - AluJo SINE Alu -1 311 87 362 289 193 12 chr5 177020831 177021080 -26064452 + MLT1L LTR MaLR 322 615 0 469 205 19 176 chr5 177021548 177021681 -26063851 + MER5B DNA MER1_type 6 158 -20 2195 126 0 0 chr5 177021681 177021991 -26063541 - AluSq SINE Alu -3 310 1 407 61 61 0 chr5 177021995 177022061 -26063471 - L1MA7 LINE L1 -1 6290 6221 469 205 19 176 chr5 177022061 177022127 -26063405 + MER5B DNA MER1_type 161 178 0 517 264 129 7 chr5 177022141 177022296 -26063236 - MER5A DNA MER1_type -6 183 10 246 246 98 0 chr5 177022510 177022571 -26062961 + LTR8 LTR ERV1 2 68 -623 1671 182 92 50 chr5 177022632 177023055 -26062477 + LTR8A LTR ERV1 287 727 0 537 208 10 0 chr5 177023055 177023151 -26062381 + MER81 DNA DNA 18 114 0 381 252 49 41 chr5 177023388 177023511 -26062021 + MIR3 SINE MIR 38 161 -47 640 302 53 20 chr5 177024254 177024499 -26061033 + MIR SINE MIR 3 255 -7 1331 94 52 5 chr5 177024563 177024754 -26060778 - MER30 DNA MER1_type -30 200 1 2099 123 3 13 chr5 177024880 177025189 -26060343 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 177025394 177025415 -26060117 + AT_rich Low_complexity Low_complexity 1 21 0 211 398 49 0 chr5 177025729 177025852 -26059680 - L2 LINE L2 -602 2712 2584 982 210 11 0 chr5 177025995 177026176 -26059356 - MER5A DNA MER1_type -6 183 1 679 215 45 45 chr5 177026184 177026361 -26059171 + MER5B DNA MER1_type 1 177 -1 197 217 65 0 chr5 177026687 177026733 -26058799 - MIR3 SINE MIR -47 161 113 32 0 0 0 chr5 177026842 177026874 -26058658 + AT_rich Low_complexity Low_complexity 1 32 0 2132 124 3 9 chr5 177026875 177027190 -26058342 + AluSq SINE Alu 1 313 0 245 313 0 30 chr5 177027447 177027546 -26057986 - MARNA DNA Mariner -92 494 399 1938 136 7 13 chr5 177027953 177028255 -26057277 + AluSx SINE Alu 1 300 -12 242 238 0 32 chr5 177028520 177028583 -26056949 + MARNA DNA Mariner 431 491 -95 496 301 82 18 chr5 177028736 177028955 -26056577 + L3 LINE CR1 1319 1551 -26 315 221 29 0 chr5 177029272 177029340 -26056192 - MIR3 SINE MIR -21 187 118 191 329 168 0 chr5 177029731 177029892 -26055640 - L3 LINE CR1 -404 1173 986 2156 124 13 0 chr5 177030980 177031287 -26054245 + AluSx SINE Alu 2 312 0 196 292 52 10 chr5 177031400 177031496 -26054036 + MIR SINE MIR 151 250 -12 1271 150 44 114 chr5 177032277 177032637 -26052895 + Charlie1b DNA MER1_type 56 390 -133 393 74 0 0 chr5 177032643 177032697 -26052835 + L1PA15 LINE L1 6103 6156 -9 350 101 0 87 chr5 177032698 177032767 -26052765 - FLAM_A SINE Alu 0 133 71 2237 125 0 0 chr5 177032784 177033089 -26052443 - AluSx SINE Alu -7 305 1 1836 134 17 27 chr5 177033180 177033472 -26052060 - AluJo SINE Alu -12 300 12 1107 171 0 46 chr5 177033488 177033704 -26051828 - AluJb SINE Alu -22 290 85 1994 149 7 3 chr5 177034667 177034956 -26050576 + AluSx SINE Alu 1 290 -22 184 29 29 29 chr5 177035527 177035561 -26049971 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1922 157 4 0 chr5 177035563 177035844 -26049688 - AluSx SINE Alu -30 282 1 236 229 0 0 chr5 177036289 177036337 -26049195 - L2 LINE L2 -10 3262 3215 357 300 64 18 chr5 177036584 177036694 -26048838 - L2 LINE L2 -22 3250 3136 337 282 100 0 chr5 177036805 177036915 -26048617 + L2 LINE L2 3187 3307 -6 257 284 98 16 chr5 177036920 177037114 -26048418 - L2 LINE L2 -254 3018 2809 377 285 90 71 chr5 177037292 177037667 -26047865 - L2 LINE L2 -768 2546 2156 1974 106 41 20 chr5 177037667 177037959 -26047573 + AluSc SINE Alu 3 300 -9 377 285 90 71 chr5 177037959 177038130 -26047402 - L2 LINE L2 -1158 2156 1990 1425 204 86 40 chr5 177039036 177039433 -26046099 + MLT1C LTR MaLR 53 467 0 1867 145 35 0 chr5 177039613 177039902 -26045630 - AluSx SINE Alu -13 299 1 386 269 69 8 chr5 177039913 177040043 -26045489 - MIR SINE MIR -73 189 52 259 266 64 0 chr5 177040196 177040290 -26045242 + Charlie7 DNA MER1_type 1 100 -2512 2208 167 71 52 chr5 177040468 177040964 -26044568 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr5 177041099 177041120 -26044412 + AT_rich Low_complexity Low_complexity 1 21 0 297 327 10 0 chr5 177041466 177041570 -26043962 + MIR3 SINE MIR 78 182 -26 554 242 19 6 chr5 177042187 177042344 -26043188 + L1MD3 LINE L1 7821 7979 -16 2129 111 11 0 chr5 177042366 177042677 -26042855 + AluSx SINE Alu 1 314 0 401 194 0 27 chr5 177042884 177043095 -26042437 + AluJo SINE Alu 9 282 -20 1947 102 51 22 chr5 177043186 177043496 -26042036 - AluSx SINE Alu 0 318 1 264 108 0 0 chr5 177043496 177043533 -26041999 + MER58 DNA MER1_type 2383 2419 -1 478 251 105 32 chr5 177043824 177043900 -26041632 - MIR SINE MIR -11 251 182 1554 171 21 38 chr5 177043900 177044067 -26041465 - AluJb SINE Alu -30 282 121 218 0 95 0 chr5 177044067 177044109 -26041423 + T-rich Low_complexity Low_complexity 1 46 0 1554 171 21 38 chr5 177044109 177044228 -26041304 - AluJb SINE Alu -191 121 1 478 251 105 32 chr5 177044228 177044370 -26041162 - MIR SINE MIR -80 182 17 214 324 14 103 chr5 177044752 177044897 -26040635 - MIR3 SINE MIR 0 208 77 1926 150 3 0 chr5 177045594 177045894 -26039638 + AluJo SINE Alu 1 301 -11 561 335 31 16 chr5 177045973 177046227 -26039305 - MIR SINE MIR 0 262 5 2072 100 3 51 chr5 177046282 177046593 -26038939 + AluSx SINE Alu 12 307 -5 313 300 48 43 chr5 177046709 177046919 -26038613 - MIR SINE MIR -50 212 2 259 191 0 0 chr5 177047864 177047911 -26037621 + MIR3 SINE MIR 111 157 -51 301 287 78 31 chr5 177047950 177048079 -26037453 - MER5A DNA MER1_type -16 162 28 301 291 55 42 chr5 177048848 177049013 -26036519 + MIR SINE MIR 92 258 -4 10248 74 13 27 chr5 177049584 177050972 -26034560 + SVA Other Other 17 1384 -2 185 343 10 0 chr5 177051962 177052061 -26033471 + MIR SINE MIR 36 135 -73 316 267 0 0 chr5 177052148 177052252 -26033280 + MIR SINE MIR 50 120 -88 363 275 114 42 chr5 177052883 177053050 -26032482 - MIR SINE MIR -2 260 82 2255 106 0 34 chr5 177053406 177053727 -26031805 + AluSg SINE Alu 1 310 0 2599 58 0 3 chr5 177054132 177054441 -26031091 - AluY SINE Alu -3 308 1 332 93 0 0 chr5 177054441 177054484 -26031048 - Alu SINE Alu -258 44 2 240 294 0 15 chr5 177054487 177054555 -26030977 + MIR SINE MIR 81 147 -61 267 263 32 45 chr5 177054663 177054819 -26030713 + L3 LINE CR1 1173 1326 -251 234 238 0 109 chr5 177054917 177055018 -26030514 + MIR SINE MIR 133 222 -40 465 257 28 35 chr5 177055055 177055199 -26030333 + MIR SINE MIR 110 252 -10 2327 74 3 29 chr5 177056114 177056424 -26029108 - AluY SINE Alu -9 302 1 635 283 79 50 chr5 177056515 177056557 -26028975 + L1ME4a LINE L1 5392 5431 -690 2007 142 7 3 chr5 177056557 177056866 -26028666 + AluSx SINE Alu 3 312 0 635 283 79 50 chr5 177056866 177057381 -26028151 + L1ME4a LINE L1 5431 5965 -156 644 135 0 10 chr5 177057873 177057977 -26027555 + AluJb SINE Alu 31 133 -179 23 0 0 0 chr5 177057990 177058013 -26027519 + AT_rich Low_complexity Low_complexity 1 23 0 182 37 37 0 chr5 177058013 177058040 -26027492 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 207 0 0 0 chr5 177058235 177058258 -26027274 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 615 284 68 22 chr5 177058259 177058481 -26027051 - MIR SINE MIR -30 232 1 299 203 25 13 chr5 177058581 177058660 -26026872 - MIR SINE MIR -19 243 164 339 25 0 0 chr5 177059057 177059097 -26026435 + (TCC)n Simple_repeat Simple_repeat 2 41 0 2000 142 3 3 chr5 177059468 177059756 -26025776 - AluSx SINE Alu -24 288 1 624 213 0 29 chr5 177059758 177059894 -26025638 - FLAM_A SINE Alu -1 141 10 216 0 0 0 chr5 177060646 177060670 -26024862 + (CA)n Simple_repeat Simple_repeat 2 25 0 1862 164 92 6 chr5 177060680 177061039 -26024493 + MLT1B LTR MaLR 1 390 0 533 322 99 46 chr5 177061490 177061646 -26023886 + L2 LINE L2 2531 2677 -636 2392 104 0 0 chr5 177061646 177061944 -26023588 + AluSx SINE Alu 1 298 -14 533 322 99 46 chr5 177061944 177062519 -26023013 + L2 LINE L2 2677 3313 0 203 287 122 111 chr5 177062957 177063012 -26022520 - MER5A DNA MER1_type 0 189 136 2360 96 10 0 chr5 177063012 177063314 -26022218 + AluSq SINE Alu 1 305 -8 203 287 122 111 chr5 177063314 177063439 -26022093 - MER5A DNA MER1_type -53 136 7 386 306 184 12 chr5 177063626 177063881 -26021651 + MER102b DNA MER1_type 1 299 -42 1355 149 9 9 chr5 177064509 177064730 -26020802 - AluJb SINE Alu -5 307 87 2482 72 0 0 chr5 177065013 177065306 -26020226 + AluY SINE Alu 1 293 -18 2357 126 28 35 chr5 177065477 177065907 -26019625 - L1MA7 LINE L1 -1 6290 5864 297 245 73 98 chr5 177066052 177066232 -26019300 + MER5A DNA MER1_type 2 188 -1 572 121 24 0 chr5 177066672 177066755 -26018777 - AluSg/x SINE Alu -14 298 214 2350 106 3 0 chr5 177066870 177067181 -26018351 + AluSx SINE Alu 1 312 0 1117 147 16 16 chr5 177067306 177067490 -26018042 + AluJo SINE Alu 122 305 -7 2077 93 0 42 chr5 177067630 177067919 -26017613 + AluSg SINE Alu 1 277 -33 195 42 0 0 chr5 177067919 177067943 -26017589 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 765 0 0 0 chr5 177067944 177068029 -26017503 + (GGAAA)n Simple_repeat Simple_repeat 4 88 0 225 311 44 0 chr5 177068102 177068192 -26017340 + L1ME LINE L1 5454 5547 -786 337 274 143 69 chr5 177068238 177068483 -26017049 + L1ME LINE L1 5539 5707 -459 222 318 88 40 chr5 177069200 177069348 -26016184 + MIR3 SINE MIR 47 201 -7 2149 111 0 40 chr5 177069396 177069720 -26015812 + AluSx SINE Alu 1 311 -1 2312 105 3 16 chr5 177070029 177070344 -26015188 - AluSx SINE Alu -1 311 1 250 323 31 0 chr5 177070351 177070447 -26015085 - L2 LINE L2 -18 3295 3197 5187 132 13 78 chr5 177070735 177071158 -26014374 + L1MA4 LINE L1 5360 5809 -491 2279 98 3 19 chr5 177071158 177071474 -26014058 + AluSq SINE Alu 1 311 -2 5187 132 13 78 chr5 177071474 177072056 -26013476 + L1MA4 LINE L1 5809 6299 -1 790 138 0 0 chr5 177073358 177073474 -26012058 + FLAM_C SINE Alu 1 116 -17 43 20 0 0 chr5 177073474 177073524 -26012008 + AT_rich Low_complexity Low_complexity 1 50 0 659 268 57 36 chr5 177073915 177074195 -26011337 + HAL1 LINE L1 641 926 -1581 1303 253 45 45 chr5 177074351 177074679 -26010853 + HAL1 LINE L1 1233 1563 -944 1795 164 0 32 chr5 177074679 177074795 -26010737 + AluJb SINE Alu 1 119 -193 2119 136 10 0 chr5 177074795 177075104 -26010428 + AluSx SINE Alu 1 312 0 1795 164 0 32 chr5 177075104 177075297 -26010235 + AluJb SINE Alu 119 300 -12 1303 253 45 45 chr5 177075297 177075522 -26010010 + HAL1 LINE L1 1562 1786 -721 331 234 149 0 chr5 177075572 177075666 -26009866 - MLT1G LTR MaLR -18 531 424 697 275 30 71 chr5 177075767 177076114 -26009418 - MLT1G LTR MaLR -223 367 26 1194 168 0 5 chr5 177076373 177076558 -26008974 - AluSg SINE Alu -126 184 1 1260 76 25 0 chr5 177076791 177076948 -26008584 + AluSg SINE Alu 1 161 -149 25 0 0 0 chr5 177076948 177076973 -26008559 + AT_rich Low_complexity Low_complexity 1 25 0 2962 10 0 0 chr5 177077234 177077548 -26007984 - AluYb8 SINE Alu -4 314 1 398 348 66 39 chr5 177077749 177077883 -26007649 - L1ME3A LINE L1 -280 5890 5761 2261 103 0 0 chr5 177077883 177078175 -26007357 - AluSx SINE Alu -16 296 5 398 348 66 39 chr5 177078175 177078624 -26006908 - L1ME3A LINE L1 -409 5761 5313 280 268 28 0 chr5 177078624 177078695 -26006837 + CT-rich Low_complexity Low_complexity 4 76 0 484 292 69 70 chr5 177078770 177078878 -26006654 - L1ME3A LINE L1 -964 5182 5075 1655 174 10 29 chr5 177078878 177079189 -26006343 + AluJo SINE Alu 1 305 -7 484 292 69 70 chr5 177079189 177079960 -26005572 - L1ME3A LINE L1 -1071 5075 4304 1819 132 0 0 chr5 177080637 177080921 -26004611 + AluSx SINE Alu 30 313 0 798 239 60 65 chr5 177080921 177081065 -26004467 + HAL1 LINE L1 2031 2174 -333 1999 125 6 53 chr5 177081065 177081385 -26004147 - AluSx SINE Alu -3 309 5 798 239 60 65 chr5 177081385 177081591 -26003941 + HAL1 LINE L1 2174 2379 -128 2085 117 7 0 chr5 177081672 177081984 -26003548 + AluSx SINE Alu 1 314 0 2029 143 215 191 chr5 177081999 177082442 -26003090 + L1MC3 LINE L1 6700 7131 -654 342 293 40 0 chr5 177082442 177082541 -26002991 + MLT1F1 LTR MaLR 35 137 -430 2029 143 215 191 chr5 177082541 177082723 -26002809 + L1MC3 LINE L1 7131 7307 -478 872 144 0 0 chr5 177082723 177082841 -26002691 + FLAM_C SINE Alu 1 118 -15 2029 143 215 191 chr5 177082841 177083027 -26002505 + L1MC3 LINE L1 7307 7487 -298 2192 111 0 3 chr5 177083027 177083316 -26002216 - AluSx SINE Alu -24 288 1 2029 143 215 191 chr5 177083316 177083464 -26002068 + L1MC3 LINE L1 7487 7785 0 652 295 97 38 chr5 177083717 177084122 -26001410 + MLT1K LTR MaLR 70 567 -21 1957 155 0 0 chr5 177084214 177084510 -26001022 + AluJb SINE Alu 1 296 -16 191 348 85 68 chr5 177084588 177084706 -26000826 - L2 LINE L2 -1 3271 3152 245 292 75 50 chr5 177084900 177084927 -26000605 - L2 LINE L2 0 3272 3247 1030 230 38 0 chr5 177084927 177085140 -26000392 + MER58A DNA MER1_type 1 221 -3 245 292 75 50 chr5 177085140 177085232 -26000300 - L2 LINE L2 -25 3247 3150 235 289 0 0 chr5 177085253 177085305 -26000227 - L2 LINE L2 -12 3260 3209 441 251 117 12 chr5 177086015 177086186 -25999346 - MLT1L LTR MaLR -3 612 424 6158 98 33 10 chr5 177086415 177087475 -25998057 - L1PB1 LINE L1 -1 6150 5090 249 285 62 49 chr5 177087476 177087620 -25997912 - MLT1L LTR MaLR -458 157 12 881 184 11 56 chr5 177088239 177088459 -25997073 + AluJb SINE Alu 142 353 0 198 0 0 0 chr5 177088459 177088481 -25997051 + (GGGA)n Simple_repeat Simple_repeat 2 23 0 2510 54 0 10 chr5 177089073 177089387 -25996145 + AluY SINE Alu 1 311 0 394 276 40 33 chr5 177089677 177089829 -25995703 + MIR SINE MIR 13 165 -97 2189 120 3 0 chr5 177090186 177090485 -25995047 + AluSq SINE Alu 1 300 -13 1620 148 36 36 chr5 177090495 177090799 -25994733 + AluJo SINE Alu 2 305 -7 311 324 138 26 chr5 177090950 177091011 -25994521 + L2 LINE L2 2703 2756 -557 243 0 0 0 chr5 177091011 177091038 -25994494 + (TAA)n Simple_repeat Simple_repeat 2 28 0 311 324 138 26 chr5 177091038 177091360 -25994172 + L2 LINE L2 2756 3119 -194 484 254 36 0 chr5 177091575 177091685 -25993847 + MER3 DNA MER1_type 9 122 -87 820 169 0 15 chr5 177091687 177091817 -25993715 - AluSg/x SINE Alu -11 301 174 756 158 102 0 chr5 177091961 177092088 -25993444 + FLAM_C SINE Alu 3 142 -1 2008 161 3 7 chr5 177092374 177092760 -25992772 - AluJb SINE Alu 0 385 1 5149 107 2 49 chr5 177093527 177093908 -25991624 + L1PA13 LINE L1 5400 5726 -437 2246 93 36 7 chr5 177093908 177094210 -25991322 + AluSx SINE Alu 1 311 -1 5149 107 2 49 chr5 177094210 177094625 -25990907 + L1PA13 LINE L1 5726 6159 -4 262 250 37 37 chr5 177094766 177094902 -25990630 + L1ME4a LINE L1 5952 6087 -34 1753 188 0 3 chr5 177094905 177095198 -25990334 - AluSx SINE Alu -20 292 1 482 213 68 0 chr5 177095198 177095312 -25990220 + L1ME1 LINE L1 6050 6177 -7 32199 106 13 59 chr5 177095445 177100175 -25985357 + L1PA7 LINE L1 12 4366 -1788 2189 103 0 0 chr5 177100175 177100483 -25985049 - AluSg SINE Alu 0 308 1 32199 106 13 59 chr5 177100483 177102190 -25983342 + L1PA7 LINE L1 4366 6149 -5 1878 142 23 13 chr5 177102558 177102867 -25982665 - AluJo SINE Alu 0 312 1 2072 116 7 10 chr5 177103421 177103775 -25981757 + AluSx SINE Alu 1 312 0 1875 141 3 23 chr5 177104266 177104570 -25980962 - AluJb SINE Alu -14 298 1 829 196 0 0 chr5 177104581 177104714 -25980818 - FLAM_C SINE Alu 0 133 1 25 0 0 0 chr5 177104937 177104962 -25980570 + AT_rich Low_complexity Low_complexity 1 25 0 206 23 68 23 chr5 177105187 177105231 -25980301 + T-rich Low_complexity Low_complexity 4 49 0 2026 127 0 3 chr5 177105238 177105521 -25980011 - AluSx SINE Alu -30 282 1 734 274 14 0 chr5 177105679 177105891 -25979641 - L1MC5 LINE L1 -51 7910 7696 314 116 0 0 chr5 177105901 177105944 -25979588 - MER4D LTR ERV1 -74 829 787 1286 204 90 64 chr5 177105944 177106443 -25979089 - L1MC5 LINE L1 -258 7703 7192 31 26 0 0 chr5 177106451 177106489 -25979043 + AT_rich Low_complexity Low_complexity 1 38 0 2017 106 0 0 chr5 177106717 177106981 -25978551 - AluSx SINE Alu -7 305 42 1279 196 0 13 chr5 177106981 177107216 -25978316 + AluJb SINE Alu 73 304 -8 1617 185 45 0 chr5 177107218 177107505 -25978027 + AluJb SINE Alu 1 300 -12 3242 156 17 81 chr5 177107506 177108226 -25977306 - L1 LINE L1 -1813 4333 3660 5040 229 32 55 chr5 177108227 177109092 -25976440 + L1MC/D LINE L1 3639 4523 -1719 836 191 0 0 chr5 177109092 177109223 -25976309 + FLAM_C SINE Alu 1 131 -2 5040 229 32 55 chr5 177109223 177109601 -25975931 + L1MC/D LINE L1 4523 4908 -1334 479 111 136 0 chr5 177109601 177109682 -25975850 - L1MA4A LINE L1 -8 6295 6204 5040 229 32 55 chr5 177109682 177110027 -25975505 + L1MC/D LINE L1 4908 5259 -983 2144 125 7 3 chr5 177110027 177110332 -25975200 + AluSx SINE Alu 1 306 -6 5040 229 32 55 chr5 177110332 177110576 -25974956 + L1MC/D LINE L1 5259 5507 -735 1676 166 3 11 chr5 177110576 177110860 -25974672 + AluJb SINE Alu 1 282 -30 365 53 0 18 chr5 177110864 177110921 -25974611 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 5040 229 32 55 chr5 177110921 177111110 -25974422 + L1MC/D LINE L1 5510 5602 -640 4922 97 38 4 chr5 177111191 177111881 -25973651 - L1PB1 LINE L1 -3 6148 5436 4771 111 7 14 chr5 177112089 177112701 -25972831 + L1P4 LINE L1 4622 5221 -947 2113 119 37 0 chr5 177112701 177112995 -25972537 - AluSx SINE Alu -7 305 1 4771 111 7 14 chr5 177112995 177113355 -25972177 + L1P4 LINE L1 5221 5582 -586 931 194 11 11 chr5 177113414 177113600 -25971932 + MER3 DNA MER1_type 24 209 0 270 364 71 14 chr5 177113600 177113740 -25971792 + MIR SINE MIR 31 178 -84 213 306 194 6 chr5 177114185 177114345 -25971187 - L2 LINE L2 -97 3216 3027 2148 206 72 11 chr5 177114345 177114787 -25970745 + MLT2B1 LTR ERVL 1 469 -51 324 349 18 10 chr5 177114793 177114948 -25970584 - L2 LINE L2 -270 3002 2847 569 160 250 0 chr5 177115159 177115259 -25970273 + FLAM_C SINE Alu 2 126 -17 994 243 84 91 chr5 177115315 177115694 -25969838 - MLT1H1 LTR MaLR -2 553 178 2279 113 0 0 chr5 177115694 177115986 -25969546 - AluSq SINE Alu -21 292 1 994 243 84 91 chr5 177115986 177116120 -25969412 - MLT1H1 LTR MaLR -377 178 44 1524 221 73 75 chr5 177116129 177116685 -25968847 - MLT1E LTR MaLR 0 593 1 418 246 43 36 chr5 177116761 177116899 -25968633 - L2 LINE L2 0 3272 3134 944 131 0 0 chr5 177116949 177117079 -25968453 + FLAM_C SINE Alu 1 130 -3 322 316 124 63 chr5 177117404 177117894 -25967638 - L2 LINE L2 -571 2743 2224 2473 168 52 2 chr5 177118012 177118418 -25967114 - MSTB LTR MaLR 0 426 1 5183 207 118 51 chr5 177118418 177119367 -25966165 - MSTB-int LTR MaLR 0 1580 494 2193 109 7 13 chr5 177119367 177119670 -25965862 + AluSq SINE Alu 1 301 -12 5183 207 118 51 chr5 177119670 177120198 -25965334 - MSTB-int LTR MaLR -1086 494 3 2190 181 42 15 chr5 177120200 177120608 -25964924 - MSTB LTR MaLR 0 426 8 930 88 22 36 chr5 177120611 177120748 -25964784 + AluJo SINE Alu 1 135 -177 329 287 7 40 chr5 177120769 177120919 -25964613 - L2 LINE L2 -1254 2060 1916 3263 217 48 45 chr5 177121041 177121841 -25963691 - L1MB7 LINE L1 -13 6171 5367 2054 134 0 3 chr5 177121841 177122139 -25963393 - AluSx SINE Alu -15 297 1 3263 217 48 45 chr5 177122139 177122240 -25963292 - L1MB7 LINE L1 -817 5367 5268 27 0 0 0 chr5 177122240 177122267 -25963265 + AT_rich Low_complexity Low_complexity 1 27 0 792 188 8 0 chr5 177122267 177122395 -25963137 - FLAM_C SINE Alu -13 130 2 533 175 6 88 chr5 177122395 177122434 -25963098 - L1MB7 LINE L1 -864 5282 5241 10338 68 0 50 chr5 177122434 177123362 -25962170 + L1PA6 LINE L1 4088 5061 -1093 2349 99 3 0 chr5 177123362 177123665 -25961867 + AluY SINE Alu 1 304 -7 10338 68 0 50 chr5 177123665 177123678 -25961854 + L1PA6 LINE L1 5061 5073 -1081 2041 108 0 18 chr5 177123678 177123957 -25961575 + AluSc SINE Alu 3 276 -33 258 56 0 0 chr5 177123957 177123993 -25961539 + (CAA)n Simple_repeat Simple_repeat 1 36 0 10338 68 0 50 chr5 177123993 177124792 -25960740 + L1PA6 LINE L1 5072 5754 -400 7154 84 46 27 chr5 177124792 177126342 -25959190 + SVA Other Other 2 1384 -2 10338 68 0 50 chr5 177126342 177126711 -25958821 + L1PA6 LINE L1 5754 6140 -14 186 71 0 0 chr5 177126711 177126739 -25958793 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 533 175 6 88 chr5 177126739 177126858 -25958674 - L1MB7 LINE L1 -903 5243 5136 851 134 0 35 chr5 177126890 177127032 -25958500 + FLAM_C SINE Alu 7 143 0 377 200 21 100 chr5 177127036 177127124 -25958408 - L1MB7 LINE L1 -979 5167 5092 4077 51 30 18 chr5 177127124 177127653 -25957879 + L1PA5 LINE L1 5642 6154 0 377 200 21 100 chr5 177127653 177127704 -25957828 - L1MB7 LINE L1 -1054 5092 5039 2231 128 0 6 chr5 177127805 177128118 -25957414 + AluSx SINE Alu 1 311 -1 2035 144 0 7 chr5 177128158 177128457 -25957075 + AluSq SINE Alu 1 297 -16 1978 138 10 3 chr5 177128463 177128761 -25956771 + AluJb SINE Alu 1 300 -12 1297 182 13 17 chr5 177128820 177129051 -25956481 + AluSx SINE Alu 34 263 -49 1350 132 0 0 chr5 177129106 177129295 -25956237 - AluSg/x SINE Alu -2 310 122 5554 204 43 19 chr5 177129305 177131575 -25953957 + L1MC1 LINE L1 4006 6327 -6 842 187 0 0 chr5 177131630 177131769 -25953763 + FAM SINE Alu 16 154 -31 577 223 74 57 chr5 177132261 177132305 -25953227 - MER5B DNA MER1_type 0 178 136 1660 163 28 0 chr5 177132305 177132593 -25952939 + AluJo SINE Alu 1 296 -16 577 223 74 57 chr5 177132593 177132723 -25952809 - MER5B DNA MER1_type -42 136 1 1935 142 7 10 chr5 177132856 177133195 -25952337 - AluSx SINE Alu 0 312 1 295 309 24 32 chr5 177133382 177133505 -25952027 + MER91A DNA MER1_type 75 196 0 1304 138 5 41 chr5 177134285 177134503 -25951029 + AluJo SINE Alu 87 296 -16 2170 133 3 0 chr5 177134578 177134887 -25950645 + AluJb SINE Alu 1 310 -2 2444 69 0 0 chr5 177135102 177135390 -25950142 + AluSq SINE Alu 1 288 -25 333 293 30 0 chr5 177135596 177135695 -25949837 + MER5A DNA MER1_type 63 164 -25 864 152 8 0 chr5 177136290 177136422 -25949110 - FLAM_C SINE Alu -10 133 1 308 291 116 17 chr5 177136537 177136709 -25948823 + L2 LINE L2 2899 3087 -226 734 147 119 0 chr5 177136753 177136896 -25948636 + MER20 DNA MER1_type 57 216 -3 1926 143 39 0 chr5 177137683 177137969 -25947563 + AluSx SINE Alu 1 297 -15 226 281 116 8 chr5 177138502 177138623 -25946909 - Charlie8 DNA MER1_type -2229 188 55 2222 110 27 3 chr5 177138778 177139079 -25946453 + AluSq SINE Alu 1 308 -5 875 122 0 8 chr5 177139257 177139380 -25946152 - AluSp SINE Alu -191 122 1 180 0 0 0 chr5 177139484 177139504 -25946028 + (A)n Simple_repeat Simple_repeat 1 20 0 842 134 0 35 chr5 177139561 177139703 -25945829 - FLAM_C SINE Alu 0 143 7 2201 119 0 10 chr5 177139955 177140258 -25945274 + AluSq SINE Alu 1 300 -13 1434 150 110 40 chr5 177141628 177141901 -25943631 + AluSx SINE Alu 2 293 -19 271 248 74 94 chr5 177142356 177142505 -25943027 + MIR SINE MIR 84 229 -33 201 342 13 0 chr5 177142461 177142540 -25942992 - MIR SINE MIR 0 262 183 * 1879 113 109 0 chr5 177142785 177143060 -25942472 + AluSq SINE Alu 1 305 -8 268 267 17 0 chr5 177143098 177143158 -25942374 - Charlie8 DNA MER1_type -8 2409 2349 220 217 14 29 chr5 177143196 177143265 -25942267 + L2 LINE L2 2913 2980 -333 265 132 0 0 chr5 177143439 177143477 -25942055 + AluSq/x SINE Alu 96 133 -169 2235 105 3 0 chr5 177143480 177143774 -25941758 + AluSp SINE Alu 1 295 -18 232 132 53 0 chr5 177144620 177144658 -25940874 + MER39B LTR ERV1 1 40 -613 274 298 25 2 chr5 177144699 177144793 -25940739 + LTR48B LTR ERV1 129 214 -430 786 133 37 7 chr5 177144889 177145024 -25940508 + LTR48 LTR ERV1 477 615 -172 1605 104 41 5 chr5 177145024 177145244 -25940288 + AluSg SINE Alu 1 228 -82 231 196 39 0 chr5 177145257 177145308 -25940224 - LTR5 LTR ERVK -14 955 903 4591 156 23 42 chr5 177145492 177146392 -25939140 - LTR5 LTR ERVK -83 886 4 467 143 0 26 chr5 177146396 177146473 -25939059 + AluSg SINE Alu 225 299 -11 439 160 130 0 chr5 177146473 177146573 -25938959 + LTR48 LTR ERV1 606 718 -69 523 202 0 40 chr5 177147013 177147137 -25938395 + MER106B DNA MER1_type 20 138 -921 1359 203 105 9 chr5 177147137 177147452 -25938080 - MER2 DNA MER2_type 0 345 1 1074 104 0 0 chr5 177147467 177147602 -25937930 + AluSq/x SINE Alu 1 135 -177 2320 76 0 7 chr5 177147603 177147893 -25937639 + AluY SINE Alu 1 288 -23 184 175 0 75 chr5 177147975 177148015 -25937517 + L2 LINE L2 3186 3222 -91 976 144 98 180 chr5 177148108 177148435 -25937097 - AluJo SINE Alu -1 301 2 242 345 92 40 chr5 177148437 177148611 -25936921 - MIR SINE MIR -43 219 37 398 200 127 0 chr5 177148971 177149081 -25936451 + L1ME2 LINE L1 6034 6157 -7 1981 113 55 0 chr5 177149148 177149439 -25936093 + AluSx SINE Alu 2 308 -4 325 293 60 23 chr5 177149840 177149973 -25935559 + MIR SINE MIR 47 184 -78 1614 173 40 4 chr5 177150263 177150541 -25934991 + AluJb SINE Alu 10 297 -15 434 250 57 113 chr5 177150541 177150786 -25934746 - L1ME4a LINE L1 -90 6031 5823 2109 97 4 0 chr5 177150786 177151055 -25934477 - AluSq SINE Alu -43 270 1 434 250 57 113 chr5 177151055 177151269 -25934263 - L1ME4a LINE L1 -298 5823 5598 2429 84 3 7 chr5 177151421 177151731 -25933801 + AluSp SINE Alu 1 309 -4 2061 133 0 10 chr5 177152023 177152344 -25933188 + AluSq SINE Alu 1 313 0 2139 142 7 0 chr5 177152622 177152932 -25932600 + AluSx SINE Alu 1 312 0 2312 94 0 0 chr5 177153181 177153467 -25932065 + AluSx SINE Alu 3 288 -24 2240 47 0 0 chr5 177153609 177153864 -25931668 + AluY SINE Alu 47 301 -10 1779 151 3 14 chr5 177154785 177155077 -25930455 + AluSx SINE Alu 1 289 -23 1912 149 4 4 chr5 177155452 177155727 -25929805 + AluSx SINE Alu 1 275 -37 1128 90 11 6 chr5 177155728 177155736 -25929796 + (GGAA)n Simple_repeat Simple_repeat 1 7 -214 186 43 0 0 chr5 177155736 177155759 -25929773 + (GGGAA)n Simple_repeat Simple_repeat 2 24 0 1128 90 11 6 chr5 177155759 177155771 -25929761 + (GGAA)n Simple_repeat Simple_repeat 7 221 0 1128 90 11 6 chr5 177155771 177155948 -25929584 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 213 94 0 0 chr5 177156355 177156387 -25929145 + (TG)n Simple_repeat Simple_repeat 2 33 0 1439 154 114 10 chr5 177156390 177156696 -25928836 - MER44D DNA MER2_type 0 609 2 182 279 44 0 chr5 177156736 177156804 -25928728 + MIR SINE MIR 147 217 -45 209 257 27 27 chr5 177157077 177157151 -25928381 + MIR3 SINE MIR 131 204 -4 1011 186 82 58 chr5 177157970 177158351 -25927181 - MLT1A1 LTR MaLR 0 365 22 1046 171 72 68 chr5 177158378 177158641 -25926891 + MER21A LTR ERV1 1 264 -667 2987 157 45 45 chr5 177158647 177158671 -25926861 + MER21A LTR ERV1 377 400 -531 2127 114 7 14 chr5 177158671 177158968 -25926564 + AluSx SINE Alu 1 295 -17 2987 157 45 45 chr5 177158968 177159492 -25926040 + MER21A LTR ERV1 399 925 -6 276 303 88 55 chr5 177159825 177159951 -25925581 - MIR SINE MIR 0 262 142 2428 68 0 0 chr5 177159951 177160247 -25925285 + AluY SINE Alu 1 296 -15 198 0 0 0 chr5 177160247 177160269 -25925263 + (CA)n Simple_repeat Simple_repeat 2 23 0 276 303 88 55 chr5 177160269 177160379 -25925153 - MIR SINE MIR -119 143 17 1082 168 287 8 chr5 177162932 177163176 -25922356 - AluJb SINE Alu 0 312 1 1028 156 11 34 chr5 177164328 177164507 -25921025 - AluJo SINE Alu -23 289 115 1657 169 36 23 chr5 177164507 177164808 -25920724 + AluJb SINE Alu 1 305 -7 2357 103 0 0 chr5 177164990 177165290 -25920242 + AluSx SINE Alu 1 300 -12 1911 157 0 31 chr5 177165301 177165620 -25919912 + AluJb SINE Alu 1 309 -3 2099 131 6 16 chr5 177165620 177165932 -25919600 + AluSx SINE Alu 1 309 -3 1751 174 12 20 chr5 177166041 177166385 -25919147 - MER2 DNA MER2_type -3 341 1 1725 136 32 25 chr5 177166986 177167266 -25918266 + AluSx SINE Alu 1 282 -30 633 245 201 10 chr5 177167411 177167814 -25917718 - L2 LINE L2 -269 3044 2559 1087 145 44 84 chr5 177167843 177168070 -25917462 + AluJo SINE Alu 1 218 -94 697 243 155 65 chr5 177168070 177168197 -25917335 - L2 LINE L2 -786 2528 2414 2203 129 0 3 chr5 177168197 177168508 -25917024 + AluSx SINE Alu 1 310 -2 697 243 155 65 chr5 177168508 177168658 -25916874 - L2 LINE L2 -900 2414 2279 2191 58 73 0 chr5 177168658 177168932 -25916600 + AluY SINE Alu 1 294 -17 697 243 155 65 chr5 177168932 177169052 -25916480 - L2 LINE L2 -1035 2279 2094 721 172 0 8 chr5 177169055 177169177 -25916355 + AluSq/x SINE Alu 7 127 -185 2240 119 0 0 chr5 177169185 177169478 -25916054 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr5 177169478 177169500 -25916032 + AT_rich Low_complexity Low_complexity 1 22 0 1542 35 0 0 chr5 177169516 177169689 -25915843 + AluY SINE Alu 130 302 -9 338 240 153 6 chr5 177169693 177169876 -25915656 - L2 LINE L2 -1211 2103 1894 869 151 7 20 chr5 177169988 177170134 -25915398 + FRAM SINE Alu 18 161 -15 317 248 296 32 chr5 177170168 177170417 -25915115 - L2 LINE L2 -1607 1707 1525 1845 87 4 0 chr5 177170417 177170646 -25914886 + AluSp SINE Alu 1 230 -83 317 248 296 32 chr5 177170646 177170707 -25914825 - L2 LINE L2 -1789 1525 1315 955 201 15 29 chr5 177171075 177171279 -25914253 + AluJo SINE Alu 82 282 -30 2090 111 40 3 chr5 177171289 177171587 -25913945 - AluSq SINE Alu -2 311 3 1871 137 0 7 chr5 177171624 177171902 -25913630 + AluSx SINE Alu 24 299 -13 1841 145 14 24 chr5 177171913 177172202 -25913330 + AluJo SINE Alu 1 286 -26 1238 171 144 11 chr5 177172255 177172518 -25913014 - AluJo SINE Alu 0 302 5 21 36 0 0 chr5 177172520 177172548 -25912984 + AT_rich Low_complexity Low_complexity 1 28 0 2053 121 3 16 chr5 177173245 177173558 -25911974 - AluSx SINE Alu -3 309 1 217 356 51 28 chr5 177173634 177173811 -25911721 - MIR3 SINE MIR -16 192 12 222 37 0 0 chr5 177173871 177173898 -25911634 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 843 132 0 0 chr5 177173902 177174016 -25911516 - AluJb SINE Alu -31 281 168 380 194 0 0 chr5 177174016 177174083 -25911449 - AluJ/FLAM SINE Alu -235 67 1 262 191 0 0 chr5 177174147 177174194 -25911338 - L1 LINE L1 -1263 4883 4837 1393 190 3 83 chr5 177174489 177174608 -25910924 + AluSx SINE Alu 1 128 -184 2214 131 0 0 chr5 177174608 177174914 -25910618 - AluSx SINE Alu -6 306 1 1393 190 3 83 chr5 177174914 177175120 -25910412 + AluSx SINE Alu 128 300 -12 1195 121 6 6 chr5 177175138 177175320 -25910212 + FRAM SINE Alu 1 176 0 1067 185 22 0 chr5 177175342 177175526 -25910006 + AluJo SINE Alu 8 195 -117 183 80 0 0 chr5 177175623 177175648 -25909884 + (TATATG)n Simple_repeat Simple_repeat 5 29 0 2179 99 7 0 chr5 177175771 177176075 -25909457 - AluSp SINE Alu 0 306 1 1533 181 23 26 chr5 177176212 177176515 -25909017 - AluJo SINE Alu -10 302 1 1986 121 65 211 chr5 177176761 177177180 -25908352 + Tigger2 DNA MER2_type 2 481 -2237 1765 184 20 0 chr5 177177180 177177474 -25908058 + AluJb SINE Alu 3 302 -10 1986 121 65 211 chr5 177177474 177177560 -25907972 + Tigger2 DNA MER2_type 481 2717 -1 254 137 0 59 chr5 177177611 177177662 -25907870 - L2 LINE L2 -1 3271 3224 221 139 0 70 chr5 177177630 177177673 -25907859 - MIR SINE MIR -11 251 212 * 45 34 0 0 chr5 177177787 177177846 -25907686 + AT_rich Low_complexity Low_complexity 1 59 0 278 297 135 83 chr5 177178049 177178303 -25907229 - L2 LINE L2 0 3313 3074 2232 100 3 16 chr5 177178303 177178612 -25906920 + AluSx SINE Alu 1 305 -7 278 297 135 83 chr5 177178612 177178815 -25906717 - L2 LINE L2 -239 3074 2832 2260 96 3 22 chr5 177178902 177179215 -25906317 + AluSg SINE Alu 4 310 0 220 244 13 64 chr5 177179231 177179309 -25906223 - L2 LINE L2 -622 2692 2619 213 154 0 0 chr5 177179333 177179372 -25906160 + GA-rich Low_complexity Low_complexity 1 39 0 1961 142 7 0 chr5 177179418 177179706 -25905826 + AluJb SINE Alu 5 294 -18 236 296 70 42 chr5 177179957 177180244 -25905288 + L1ME2 LINE L1 5609 5903 -218 567 184 0 46 chr5 177180384 177180493 -25905039 + AluJo/FLAM SINE Alu 24 127 -185 2182 139 0 0 chr5 177180494 177180804 -25904728 + AluSx SINE Alu 1 310 -2 183 42 0 0 chr5 177180809 177180833 -25904699 + (GA)n Simple_repeat Simple_repeat 1 24 0 1073 153 28 81 chr5 177180851 177181009 -25904523 + MER33 DNA MER1_type 1 143 -2442 1763 184 3 7 chr5 177181009 177181303 -25904229 - AluJb SINE Alu -19 293 1 1073 153 28 81 chr5 177181303 177181392 -25904140 + MER33 DNA MER1_type 143 235 -89 2152 115 3 7 chr5 177181393 177181689 -25903843 + AluSg SINE Alu 1 295 -15 29 0 0 0 chr5 177181689 177181718 -25903814 + AT_rich Low_complexity Low_complexity 1 29 0 610 113 0 0 chr5 177181944 177182024 -25903508 + MADE1 DNA Mariner 1 80 0 311 172 31 0 chr5 177182361 177182425 -25903107 + L1ME2 LINE L1 6026 6091 -73 2288 122 0 0 chr5 177182442 177182753 -25902779 - AluSq SINE Alu 0 313 3 1930 137 7 7 chr5 177182798 177183098 -25902434 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr5 177183161 177183185 -25902347 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 2630 55 0 0 chr5 177183188 177183496 -25902036 + AluY SINE Alu 1 308 -3 23 0 0 0 chr5 177183809 177183832 -25901700 + AT_rich Low_complexity Low_complexity 1 23 0 2337 92 3 7 chr5 177184232 177184537 -25900995 - AluSq SINE Alu -9 304 1 488 252 18 9 chr5 177185021 177185132 -25900400 + L2 LINE L2 3195 3306 -7 2084 123 3 28 chr5 177185134 177185452 -25900080 + AluSx SINE Alu 3 312 0 455 83 0 69 chr5 177185538 177185683 -25899849 + (TA)n Simple_repeat Simple_repeat 1 135 0 460 247 0 0 chr5 177185762 177185855 -25899677 + L2 LINE L2 3211 3303 -10 2029 138 0 7 chr5 177186115 177186405 -25899127 + AluSx SINE Alu 1 288 -24 2138 133 0 0 chr5 177186829 177187130 -25898402 + AluSg SINE Alu 1 301 -9 1687 167 0 4 chr5 177187275 177187551 -25897981 + AluJb SINE Alu 3 277 -35 441 0 0 0 chr5 177187552 177187601 -25897931 + (TTA)n Simple_repeat Simple_repeat 3 51 0 7410 39 0 0 chr5 177187601 177188465 -25897067 - L1PA3 LINE L1 -18 6137 5274 * 8113 23 2 10 chr5 177188463 177189430 -25896102 + L1P LINE L1 4351 5309 -837 338 300 45 0 chr5 177189445 177189555 -25895977 - L2 LINE L2 -12 3301 3187 2267 107 0 3 chr5 177189971 177190270 -25895262 + AluSg SINE Alu 1 298 -12 253 267 191 58 chr5 177190975 177191200 -25894332 + L1MC4 LINE L1 7621 7875 -167 2307 81 7 3 chr5 177191228 177191525 -25894007 + AluSg SINE Alu 1 298 -12 607 209 0 0 chr5 177191561 177191676 -25893856 - AluJ SINE Alu -11 301 187 930 130 0 7 chr5 177191676 177191814 -25893718 - AluJ SINE Alu -175 137 1 670 268 30 12 chr5 177191976 177192144 -25893388 - MER5B DNA MER1_type -1 177 7 241 253 63 25 chr5 177192169 177192248 -25893284 + L2 LINE L2 3168 3249 -23 406 289 90 78 chr5 177192780 177192938 -25892594 - L2 LINE L2 -6 3307 3152 1812 77 4 0 chr5 177192938 177193171 -25892361 + AluSp SINE Alu 80 313 0 406 289 90 78 chr5 177193171 177193556 -25891976 - L2 LINE L2 -161 3152 2702 370 194 145 57 chr5 177193565 177193689 -25891843 - MLT1E1 LTR MaLR -41 613 479 1622 188 33 10 chr5 177193722 177193918 -25891614 - AluJo SINE Alu 0 312 105 1746 153 8 0 chr5 177193918 177194179 -25891353 + AluJb SINE Alu 1 263 -49 1622 188 33 10 chr5 177194179 177194285 -25891247 - AluJo SINE Alu -207 105 3 906 166 19 32 chr5 177194455 177194612 -25890920 - FRAM SINE Alu -21 155 1 358 283 165 25 chr5 177194633 177194767 -25890765 - L2 LINE L2 -1220 2094 1980 2200 108 3 7 chr5 177194767 177195072 -25890460 + AluSq SINE Alu 1 304 -9 358 283 165 25 chr5 177195072 177195259 -25890273 - L2 LINE L2 -1334 1980 1728 251 283 156 17 chr5 177195403 177195576 -25889956 - L2 LINE L2 -1950 1364 1168 309 109 0 0 chr5 177195743 177195789 -25889743 + (TA)n Simple_repeat Simple_repeat 1 46 0 802 214 0 0 chr5 177195920 177196037 -25889495 + FLAM_C SINE Alu 2 118 -25 2205 116 3 0 chr5 177196058 177196350 -25889182 - AluSp SINE Alu -20 293 1 1492 147 0 107 chr5 177196376 177196676 -25888856 + AluSx SINE Alu 17 284 -28 315 104 0 0 chr5 177196681 177196729 -25888803 + (TA)n Simple_repeat Simple_repeat 2 49 0 473 263 134 20 chr5 177196830 177197009 -25888523 + MIR SINE MIR 17 214 -48 398 263 35 35 chr5 177197029 177197143 -25888389 - MER81 DNA DNA 0 114 1 1882 123 0 0 chr5 177197269 177197522 -25888010 + AluSc SINE Alu 1 253 -56 295 260 73 0 chr5 177197538 177197634 -25887898 + L1ME1 LINE L1 6008 6110 -56 1603 167 26 36 chr5 177197643 177197949 -25887583 - AluJo SINE Alu -9 303 1 2206 111 10 0 chr5 177197953 177198287 -25887245 - AluSx SINE Alu 0 337 1 708 302 54 18 chr5 177198549 177198771 -25886761 + MIR SINE MIR 33 262 0 21 0 0 0 chr5 177199310 177199331 -25886201 + AT_rich Low_complexity Low_complexity 1 21 0 354 290 22 14 chr5 177199486 177199548 -25885984 + MIR SINE MIR 11 71 -191 2219 110 0 13 chr5 177199548 177199856 -25885676 + AluSx SINE Alu 1 304 -8 354 290 22 14 chr5 177199856 177199985 -25885547 + MIR SINE MIR 71 262 0 2237 95 7 0 chr5 177200101 177200413 -25885119 + AluSq SINE Alu 1 314 0 693 160 28 0 chr5 177200426 177200532 -25885000 + AluJb SINE Alu 14 122 -190 333 0 0 0 chr5 177200532 177200569 -25884963 + (CA)n Simple_repeat Simple_repeat 2 38 0 2152 96 0 0 chr5 177200929 177201200 -25884332 - AluSx SINE Alu -36 276 6 427 331 41 17 chr5 177201367 177201539 -25883993 - MIR SINE MIR -72 190 15 250 310 0 11 chr5 177201667 177201754 -25883778 - L2 LINE L2 -36 3277 3192 22 0 0 0 chr5 177201997 177202019 -25883513 + AT_rich Low_complexity Low_complexity 1 22 0 2294 84 3 7 chr5 177202024 177202320 -25883212 + AluSc SINE Alu 1 295 -14 182 286 0 0 chr5 177202544 177202593 -25882939 + L3 LINE CR1 1181 1229 -348 797 242 79 9 chr5 177202652 177202867 -25882665 - MIR SINE MIR -2 260 31 1915 140 0 19 chr5 177202981 177203151 -25882381 - AluJb SINE Alu -10 302 139 1682 167 33 13 chr5 177203151 177203450 -25882082 - AluSx SINE Alu -7 305 1 1915 140 0 19 chr5 177203450 177203587 -25881945 - AluJb SINE Alu -173 139 1 807 285 52 0 chr5 177204209 177204458 -25881074 - MIR SINE MIR 0 262 1 199 206 14 82 chr5 177204582 177204655 -25880877 - MIR SINE MIR -90 172 105 735 151 196 123 chr5 177205589 177205646 -25879886 - MER46A DNA MER2_type -2495 236 185 2432 87 3 0 chr5 177205646 177205944 -25879588 - AluSp SINE Alu -14 299 1 735 151 196 123 chr5 177205944 177206105 -25879427 - MER46A DNA MER2_type -2546 185 2 445 287 85 12 chr5 177206124 177206288 -25879244 - MIR SINE MIR -64 198 23 320 252 0 76 chr5 177206333 177206452 -25879080 - MER5B DNA MER1_type 0 178 69 744 209 0 29 chr5 177206452 177206591 -25878941 - FLAM_C SINE Alu -7 136 2 237 216 20 0 chr5 177206602 177206653 -25878879 - MER5B DNA MER1_type -126 52 1 2121 136 7 3 chr5 177206700 177207008 -25878524 - AluSq SINE Alu -2 311 3 206 331 65 32 chr5 177207055 177207179 -25878353 + MER5A DNA MER1_type 40 167 -22 941 239 5 0 chr5 177207680 177207868 -25877664 - MER5A DNA MER1_type 0 189 1 1006 153 61 52 chr5 177208125 177208423 -25877109 + MER4A LTR ERV1 1 342 -322 493 169 226 8 chr5 177208483 177208607 -25876925 + MER4C LTR ERV1 296 446 -19 28 86 0 0 chr5 177208638 177208708 -25876824 + AT_rich Low_complexity Low_complexity 1 70 0 2090 125 0 28 chr5 177208779 177209128 -25876404 + AluSx SINE Alu 1 340 0 552 250 109 30 chr5 177209230 177209493 -25876039 - L1MC4a LINE L1 -353 5802 5639 270 274 95 0 chr5 177210039 177210123 -25875409 - L2 LINE L2 -14 3299 3208 239 234 32 117 chr5 177210201 177210295 -25875237 + MIR3 SINE MIR 108 193 -15 270 293 113 67 chr5 177210781 177210830 -25874702 - MIR3 SINE MIR -12 196 151 2270 67 11 0 chr5 177210830 177211151 -25874381 - AluSp SINE Alu 0 324 1 270 293 113 67 chr5 177211151 177211250 -25874282 - MIR3 SINE MIR -57 151 40 2404 103 0 0 chr5 177211441 177211752 -25873780 - AluSx SINE Alu 0 312 2 232 250 195 34 chr5 177211973 177212081 -25873451 - L1MC4a LINE L1 -1659 6149 6060 2204 126 0 0 chr5 177212081 177212382 -25873150 - AluSg SINE Alu -9 301 1 232 250 195 34 chr5 177212382 177212509 -25873023 - L1MC4a LINE L1 -1748 6060 5876 1786 126 88 0 chr5 177212543 177212853 -25872679 - AluSq SINE Alu 0 333 1 953 90 0 42 chr5 177212858 177213002 -25872530 - FLAM_C SINE Alu 0 143 6 231 267 0 81 chr5 177213006 177213092 -25872440 - L1MC5 LINE L1 -175 7786 7708 2222 96 0 7 chr5 177213103 177213396 -25872136 + AluSq SINE Alu 1 291 -22 739 253 71 55 chr5 177213409 177213848 -25871684 - L1MC5 LINE L1 -248 7713 7268 1976 143 27 3 chr5 177213917 177214210 -25871322 - AluSx SINE Alu -12 300 1 2268 59 4 0 chr5 177214260 177214531 -25871001 - AluY SINE Alu -39 272 1 266 234 80 44 chr5 177215046 177215183 -25870349 - L1ME4a LINE L1 -11 6110 5969 928 143 0 8 chr5 177215183 177215316 -25870216 - FLAM_C SINE Alu 0 133 2 475 217 80 29 chr5 177215579 177215717 -25869815 - MLT1K LTR MaLR -22 566 422 290 271 12 12 chr5 177215870 177215955 -25869577 - MLT1K LTR MaLR -358 230 146 575 189 0 0 chr5 177216417 177216507 -25869025 - FRAM SINE Alu -25 151 62 1122 162 5 5 chr5 177216716 177216901 -25868631 - AluJo SINE Alu -127 185 1 201 39 0 0 chr5 177217339 177217365 -25868167 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 870 226 128 0 chr5 177217791 177217986 -25867546 + AluJo SINE Alu 1 220 -92 248 152 22 0 chr5 177217986 177218032 -25867500 + Alu SINE Alu 90 136 -166 1081 276 60 61 chr5 177218138 177218326 -25867206 - L1ME4a LINE L1 -220 5950 5763 1954 131 3 7 chr5 177218326 177218630 -25866902 - AluSx SINE Alu 0 303 1 1081 276 60 61 chr5 177218630 177219007 -25866525 - L1ME4a LINE L1 -407 5763 5387 2170 131 0 10 chr5 177219007 177219320 -25866212 - AluSx SINE Alu -2 310 1 2230 131 0 0 chr5 177219321 177219619 -25865913 - AluSx SINE Alu -14 298 1 1081 276 60 61 chr5 177219619 177219823 -25865709 - L1ME4a LINE L1 -782 5388 5188 7277 214 37 30 chr5 177220167 177223461 -25862071 + L1M2c LINE L1 75 2996 -3852 454 211 57 0 chr5 177223536 177223659 -25861873 + L1M2c LINE L1 2643 2772 -4077 2291 213 84 6 chr5 177223668 177224084 -25861448 + L1M2c LINE L1 3009 3391 -3457 1769 124 4 34 chr5 177224084 177224351 -25861181 - AluSq SINE Alu -54 259 1 2291 213 84 6 chr5 177224351 177224516 -25861016 + L1M2c LINE L1 3391 3542 -3306 1557 159 43 7 chr5 177224516 177224818 -25860714 - AluJo SINE Alu 0 312 1 2291 213 84 6 chr5 177224818 177224912 -25860620 + L1M2c LINE L1 3542 3738 -3110 2253 106 0 7 chr5 177224922 177225214 -25860318 + AluSx SINE Alu 1 290 -22 231 36 0 0 chr5 177225214 177225242 -25860290 + (TA)n Simple_repeat Simple_repeat 2 29 0 398 205 0 0 chr5 177225252 177225330 -25860202 + L1M2 LINE L1 3628 3705 -3143 569 120 0 70 chr5 177225330 177225430 -25860102 - AluSg/x SINE Alu -5 305 213 315 179 0 15 chr5 177225430 177225483 -25860049 + L1M2 LINE L1 3693 3746 -3102 1578 159 18 61 chr5 177225483 177225809 -25859723 + AluJo SINE Alu 1 312 0 315 179 0 15 chr5 177225809 177225822 -25859710 + L1M2 LINE L1 3746 3758 -3090 978 137 73 213 chr5 177225867 177226153 -25859379 + L1M2 LINE L1 3730 4054 -2794 746 182 0 53 chr5 177226153 177226285 -25859247 + FLAM_C SINE Alu 2 126 -7 978 137 73 213 chr5 177226285 177226304 -25859228 + L1M2 LINE L1 4054 4074 -2774 2098 130 3 0 chr5 177226304 177226604 -25858928 - AluSq SINE Alu -12 301 1 978 137 73 213 chr5 177226604 177226846 -25858686 + L1M2 LINE L1 4074 4201 -2647 659 252 0 8 chr5 177226859 177226990 -25858542 + FLAM_C SINE Alu 3 132 -11 334 55 0 36 chr5 177227018 177227073 -25858459 + (GGGGA)n Simple_repeat Simple_repeat 1 53 0 5446 158 36 29 chr5 177227077 177227560 -25857972 + L1M2 LINE L1 4204 4682 -2282 1589 184 34 10 chr5 177227560 177227854 -25857678 + AluJo SINE Alu 1 301 -11 5446 158 36 29 chr5 177227854 177228331 -25857201 + L1M2 LINE L1 4682 5154 -1810 2332 97 0 3 chr5 177228331 177228639 -25856893 - AluY SINE Alu -4 307 1 5446 158 36 29 chr5 177228639 177229163 -25856369 + L1M2 LINE L1 5154 5673 -1291 2199 128 0 0 chr5 177229163 177229469 -25856063 + AluSx SINE Alu 1 306 -6 5446 158 36 29 chr5 177229469 177229735 -25855797 + L1M2 LINE L1 5673 5936 -1028 1448 152 156 11 chr5 177229735 177229998 -25855534 + AluSg1 SINE Alu 3 303 -6 5446 158 36 29 chr5 177229998 177230091 -25855441 + L1M2 LINE L1 5936 6221 -743 1142 127 0 0 chr5 177230096 177230254 -25855278 - AluSp SINE Alu -20 293 136 1180 264 112 44 chr5 177230258 177230666 -25854866 - L1M4 LINE L1 -1779 4367 3904 1951 130 0 24 chr5 177230666 177230982 -25854550 - AluSx SINE Alu 0 309 1 1180 264 112 44 chr5 177230982 177231160 -25854372 - L1M4 LINE L1 -2242 3904 3740 334 254 70 18 chr5 177231161 177231237 -25854295 - L1M4 LINE L1 -2499 3647 3562 222 105 0 0 chr5 177231237 177231275 -25854257 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 334 254 70 18 chr5 177231275 177231312 -25854220 - L1M4 LINE L1 -2584 3562 3528 210 122 0 49 chr5 177231312 177231353 -25854179 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 285 323 39 8 chr5 177231371 177231501 -25854031 - L1M4 LINE L1 -2595 3551 3418 540 60 36 36 chr5 177231812 177231896 -25853636 + L1PA7 LINE L1 6071 6154 0 2131 106 0 20 chr5 177232011 177232174 -25853358 - AluSq SINE Alu -17 296 140 1946 45 0 0 chr5 177232174 177232397 -25853135 - AluY SINE Alu -11 300 78 2131 106 0 20 chr5 177232397 177232534 -25852998 - AluSq SINE Alu -173 140 2 251 253 116 53 chr5 177232595 177232690 -25852842 - MER21B LTR ERV1 -81 782 682 356 92 123 0 chr5 177232871 177232936 -25852596 + L1MA7 LINE L1 6219 6291 0 1239 207 102 0 chr5 177233080 177233375 -25852157 + MER58B DNA MER1_type 17 341 0 214 222 189 11 chr5 177233388 177233478 -25852054 + MIR SINE MIR 90 195 -67 245 371 22 11 chr5 177233585 177233674 -25851858 + MIR SINE MIR 2 91 -171 726 302 9 9 chr5 177233700 177233922 -25851610 + MIR SINE MIR 2 223 -39 234 268 0 0 chr5 177233962 177234018 -25851514 + MIR SINE MIR 162 217 -45 1542 205 14 3 chr5 177234343 177234636 -25850896 - AluJo SINE Alu -15 297 2 876 138 46 23 chr5 177234669 177234799 -25850733 + FLAM_C SINE Alu 1 133 0 2417 86 0 16 chr5 177234805 177235119 -25850413 + AluSc SINE Alu 1 309 0 722 222 0 0 chr5 177235941 177236058 -25849474 - FLAM_C SINE Alu -16 117 1 296 233 22 33 chr5 177236060 177236077 -25849455 + LTR67 LTR ERVL 469 557 0 303 233 55 0 chr5 177236077 177236150 -25849382 + MLT1K LTR MaLR 512 588 0 391 261 49 42 chr5 177236153 177236295 -25849237 + MER5B DNA MER1_type 7 149 -29 853 157 0 8 chr5 177236519 177236653 -25848879 - FLAM_C SINE Alu -10 133 1 219 139 0 0 chr5 177237120 177237156 -25848376 + (CATA)n Simple_repeat Simple_repeat 1 36 0 2125 109 11 0 chr5 177237156 177237439 -25848093 - AluSq SINE Alu -27 286 1 2233 101 7 3 chr5 177237579 177237876 -25847656 - AluSp SINE Alu -15 298 1 724 147 13 207 chr5 177237877 177238109 -25847423 - MER5A DNA MER1_type 0 189 3 628 247 101 87 chr5 177238219 177238575 -25846957 - MLT1J1 LTR MaLR -83 363 3 249 252 126 16 chr5 177240240 177240367 -25845165 + L2 LINE L2 1637 1777 -1537 2066 109 10 26 chr5 177240591 177240893 -25844639 - AluSx SINE Alu -15 297 1 1543 136 9 0 chr5 177241199 177241419 -25844113 - AluJb SINE Alu -88 224 3 653 184 296 14 chr5 177241431 177241654 -25843878 - L1MC4 LINE L1 -6 8036 7751 2272 88 0 0 chr5 177241664 177241958 -25843574 - AluY SINE Alu -16 295 2 2083 116 0 7 chr5 177242162 177242464 -25843068 - AluSx SINE Alu -6 306 7 404 320 13 13 chr5 177242467 177242617 -25842915 - MIR SINE MIR -92 170 21 277 293 69 43 chr5 177242845 177242961 -25842571 - MER5B DNA MER1_type -59 119 1 328 186 142 44 chr5 177243030 177243143 -25842389 - MIR SINE MIR -61 147 24 1605 146 54 27 chr5 177243963 177244257 -25841275 - AluSx SINE Alu -8 304 3 364 203 203 8 chr5 177244328 177244446 -25841086 + L2 LINE L2 1844 1984 -1330 198 189 0 0 chr5 177244447 177244484 -25841048 + L2 LINE L2 2120 2156 -1158 731 264 117 86 chr5 177244572 177245028 -25840504 + L2 LINE L2 2395 2835 -478 2613 55 0 3 chr5 177245028 177245340 -25840192 - AluY SINE Alu 0 311 1 731 264 117 86 chr5 177245340 177245673 -25839859 + L2 LINE L2 2835 3307 -6 243 253 25 38 chr5 177245824 177245903 -25839629 - L1MC/D LINE L1 -2120 5688 5611 267 295 0 16 chr5 177245916 177245977 -25839555 - MIR SINE MIR -129 79 20 394 282 135 76 chr5 177246139 177246597 -25838935 - L2 LINE L2 -6 3307 2823 3411 212 46 22 chr5 177246713 177247940 -25837592 - L1ME1 LINE L1 -5 6161 4904 589 152 304 36 chr5 177248090 177248228 -25837304 + FAM SINE Alu 1 175 0 2293 98 19 0 chr5 177248232 177248539 -25836993 + AluSp SINE Alu 1 313 0 1647 153 4 0 chr5 177248617 177248866 -25836666 - AluSx SINE Alu -10 302 53 1707 218 42 47 chr5 177248866 177249275 -25836257 - LTR2 LTR ERV1 -2 447 41 446 167 71 12 chr5 177249325 177249409 -25836123 - AluY SINE Alu -228 90 2 2200 118 0 0 chr5 177249912 177250209 -25835323 + AluSx SINE Alu 1 297 -15 427 189 56 0 chr5 177250640 177250730 -25834802 - MER96B DNA MER1_type? 0 417 323 1211 120 0 0 chr5 177250732 177250899 -25834633 + AluSp SINE Alu 137 303 -10 292 118 27 173 chr5 177250899 177250973 -25834559 + MER96B DNA MER1_type? 90 145 -272 1758 107 9 0 chr5 177250973 177251206 -25834326 - AluSp SINE Alu -78 235 1 292 118 27 173 chr5 177251206 177251241 -25834291 + MER96B DNA MER1_type? 145 183 -234 240 147 70 6 chr5 177251377 177251533 -25833999 + (TA)n Simple_repeat Simple_repeat 2 167 0 1281 134 15 10 chr5 177251593 177251794 -25833738 - AluJb SINE Alu -26 286 85 273 290 0 0 chr5 177251794 177251863 -25833669 - L2 LINE L2 -7 3265 3197 26 0 0 0 chr5 177252455 177252481 -25833051 + AT_rich Low_complexity Low_complexity 1 26 0 2002 121 61 0 chr5 177252748 177253028 -25832504 - AluSx SINE Alu -15 297 1 863 127 0 0 chr5 177253047 177253165 -25832367 - AluJb SINE Alu -194 118 1 1931 168 48 6 chr5 177253181 177253538 -25831994 - L1MC1 LINE L1 0 6727 6356 844 205 39 48 chr5 177253552 177253781 -25831751 - AluJo SINE Alu 0 312 86 494 214 0 0 chr5 177253782 177253866 -25831666 - AluJb SINE Alu -62 250 167 1776 107 0 8 chr5 177253866 177254109 -25831423 + AluSg/x SINE Alu 65 305 -5 1494 194 27 50 chr5 177254109 177254749 -25830783 - L1MC1 LINE L1 -656 5980 5360 2087 155 0 0 chr5 177254753 177255063 -25830469 + AluSx SINE Alu 1 310 -2 824 257 27 6 chr5 177255156 177255339 -25830193 - AluJo SINE Alu -8 304 118 4074 189 59 14 chr5 177255402 177256846 -25828686 - L1MC1 LINE L1 -3296 3244 1739 1400 157 38 46 chr5 177256858 177257119 -25828413 - AluJb SINE Alu -8 304 46 3239 208 84 36 chr5 177257123 177258253 -25827279 - L1MC1 LINE L1 -4814 1726 284 275 0 0 28 chr5 177258253 177258289 -25827243 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3239 208 84 36 chr5 177258289 177258565 -25826967 - L1MC1 LINE L1 -6256 284 23 1251 310 81 2 chr5 177258803 177259213 -25826319 - LTR16A LTR ERVL 0 450 9 2234 99 10 0 chr5 177259229 177259531 -25826001 - AluSx SINE Alu -7 305 1 536 282 139 19 chr5 177259665 177259931 -25825601 + L2 LINE L2 2678 2975 -339 573 193 79 7 chr5 177261234 177261374 -25824158 - HsTC2 DNA Tc2 -99 1799 1650 238 264 60 64 chr5 177261564 177261747 -25823785 - L1MC4a LINE L1 -228 5942 5848 1957 159 0 3 chr5 177261747 177262048 -25823484 + AluSx SINE Alu 1 300 -12 238 264 60 64 chr5 177262048 177262262 -25823270 - L1MC4a LINE L1 -322 5848 5635 1101 227 23 5 chr5 177262283 177262503 -25823029 - MER58A DNA MER1_type 0 224 1 2000 148 0 19 chr5 177264352 177264670 -25820862 + AluSx SINE Alu 1 312 0 2229 115 0 6 chr5 177264718 177265030 -25820502 - AluSx SINE Alu -2 310 1 209 309 49 0 chr5 177265045 177265126 -25820406 - L3 LINE CR1 -56 1521 1437 243 288 15 15 chr5 177265186 177265252 -25820280 - L1MC4a LINE L1 -2154 5654 5589 202 304 0 0 chr5 177265310 177265366 -25820166 + L3 LINE CR1 1326 1381 -196 1387 104 5 45 chr5 177265405 177265607 -25819925 + AluSq SINE Alu 99 292 -21 1059 159 53 6 chr5 177265638 177265808 -25819724 + L1PB4 LINE L1 5976 6153 -3 303 286 99 0 chr5 177265845 177265936 -25819596 + L3 LINE CR1 1450 1549 -28 279 286 41 34 chr5 177267066 177267213 -25818319 - L1ME LINE L1 -341 5780 5633 277 196 122 65 chr5 177267217 177267324 -25818208 + L2 LINE L2 3157 3269 -3 2084 122 7 10 chr5 177267437 177267733 -25817799 - AluSq SINE Alu -18 295 1 184 220 160 0 chr5 177267758 177267808 -25817724 - MIR SINE MIR -64 144 87 183 80 0 0 chr5 177268091 177268116 -25817416 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 266 196 0 18 chr5 177268248 177268304 -25817228 + L2 LINE L2 3201 3255 -17 822 211 91 23 chr5 177268716 177268891 -25816641 + AluJo SINE Alu 2 188 -124 26 0 0 0 chr5 177268898 177268924 -25816608 + AT_rich Low_complexity Low_complexity 1 26 0 1512 158 54 14 chr5 177268981 177269260 -25816272 - AluJb SINE Alu -22 290 1 1862 156 0 23 chr5 177269314 177269621 -25815911 + AluJb SINE Alu 5 304 -8 1178 257 52 101 chr5 177269773 177270111 -25815421 - L2 LINE L2 0 3313 2960 8153 94 5 19 chr5 177270111 177271193 -25814339 + MER11C LTR ERVK 1 1067 -4 1528 190 0 11 chr5 177271198 177271467 -25814065 - AluJo SINE Alu -46 266 1 1178 257 52 101 chr5 177271467 177271962 -25813570 - L2 LINE L2 -357 2956 2502 315 104 0 0 chr5 177272093 177272141 -25813391 + (TG)n Simple_repeat Simple_repeat 2 49 0 643 191 21 21 chr5 177272266 177272407 -25813125 + L1MB7 LINE L1 6034 6174 -10 502 242 0 32 chr5 177272464 177272588 -25812944 - LTR37B LTR ERV1 -343 125 6 2104 113 3 0 chr5 177273723 177274014 -25811518 + AluSx SINE Alu 1 292 -20 319 248 150 8 chr5 177274103 177274236 -25811296 + L1ME4a LINE L1 5965 6116 -5 479 248 101 85 chr5 177274582 177274772 -25810760 - L1MC4a LINE L1 -216 5905 5708 2313 93 0 3 chr5 177274772 177275072 -25810460 + AluSc SINE Alu 1 299 -10 479 248 101 85 chr5 177275072 177275139 -25810393 - L1MC4a LINE L1 -413 5708 5644 239 368 66 0 chr5 177275211 177275347 -25810185 + L3 LINE CR1 1083 1227 -350 767 222 96 111 chr5 177275457 177275800 -25809732 + MLT1K LTR MaLR 18 355 -233 2161 133 0 0 chr5 177276430 177276730 -25808802 - AluSx SINE Alu -12 300 1 822 185 0 15 chr5 177276732 177276867 -25808665 - AluJo/FLAM SINE Alu -169 133 1 2236 101 7 10 chr5 177277372 177277697 -25807835 - AluSq SINE Alu 0 313 1 2053 195 56 139 chr5 177277715 177277967 -25807565 - L1MC5 LINE L1 -36 7925 7654 2237 123 0 0 chr5 177277967 177278267 -25807265 - AluSx SINE Alu -12 300 1 2053 195 56 139 chr5 177278267 177278453 -25807079 - L1MC5 LINE L1 -307 7654 7454 1826 162 30 0 chr5 177278453 177278755 -25806777 - AluJb SINE Alu -1 311 1 2053 195 56 139 chr5 177278755 177279489 -25806043 - L1MC5 LINE L1 -507 7454 6876 1779 253 71 6 chr5 177279854 177280320 -25805212 - MLT1J LTR MaLR -15 496 1 21 36 0 0 chr5 177280545 177280573 -25804959 + AT_rich Low_complexity Low_complexity 1 28 0 401 267 23 46 chr5 177280747 177280878 -25804654 - MIR SINE MIR -133 129 2 400 278 0 37 chr5 177281077 177281185 -25804347 - L2 LINE L2 -4 3268 3165 198 344 0 0 chr5 177282094 177282158 -25803374 - MIR3 SINE MIR -42 166 103 299 342 123 32 chr5 177282467 177282654 -25802878 + MIR3 SINE MIR 1 204 -4 30 83 0 0 chr5 177283672 177283744 -25801788 + AT_rich Low_complexity Low_complexity 1 72 0 273 173 39 0 chr5 177283908 177283960 -25801572 + MIR SINE MIR 117 170 -92 726 235 65 55 chr5 177284792 177284992 -25800540 + MER63A DNA MER1_type 5 206 -4 391 254 51 0 chr5 177285189 177285307 -25800225 + MIR SINE MIR 69 192 -70 250 310 80 10 chr5 177285702 177285802 -25799730 + MIR SINE MIR 12 118 -144 2100 121 3 14 chr5 177285821 177286118 -25799414 - AluSg SINE Alu -16 294 1 1821 169 7 0 chr5 177286142 177286437 -25799095 + AluJb SINE Alu 1 297 -15 655 279 41 0 chr5 177286504 177286676 -25798856 - MIR SINE MIR -1 261 83 2104 122 0 3 chr5 177286974 177287261 -25798271 + AluSq SINE Alu 4 289 -24 252 0 0 0 chr5 177287261 177287289 -25798243 + (GA)n Simple_repeat Simple_repeat 2 29 0 265 300 24 147 chr5 177287628 177287961 -25797571 + L2 LINE L2 2980 3271 -1 1662 173 30 33 chr5 177288378 177288678 -25796854 - AluJb SINE Alu -13 299 1 510 309 99 30 chr5 177288767 177289071 -25796461 + L2 LINE L2 2618 2942 -372 334 143 299 0 chr5 177289071 177289148 -25796384 + MER96 DNA MER1_type? 1 100 -75 792 197 95 0 chr5 177289193 177289355 -25796177 - AluJb SINE Alu 0 306 132 494 250 0 77 chr5 177289442 177289598 -25795934 + L2 LINE L2 3169 3312 -1 2037 156 0 3 chr5 177289976 177290283 -25795249 + AluSx SINE Alu 3 308 -4 356 313 0 0 chr5 177290962 177291045 -25794487 - L2 LINE L2 0 3272 3190 277 111 270 0 chr5 177291059 177291122 -25794410 - MADE1 DNA Mariner 0 80 1 486 298 105 42 chr5 177291123 177291637 -25793895 - L2 LINE L2 -109 3163 2610 609 69 0 0 chr5 177291692 177291804 -25793728 - AluSg/x SINE Alu 0 322 211 320 297 72 36 chr5 177292356 177292551 -25792981 - L1ME LINE L1 -363 5758 5557 213 286 91 13 chr5 177293104 177293181 -25792351 + MIR3 SINE MIR 82 164 -44 26 30 0 0 chr5 177293192 177293225 -25792307 + AT_rich Low_complexity Low_complexity 1 33 0 309 234 39 13 chr5 177293430 177293507 -25792025 + MIR3 SINE MIR 106 184 -24 1623 174 4 22 chr5 177293522 177293797 -25791735 + AluJo SINE Alu 13 282 -30 433 292 16 38 chr5 177294029 177294214 -25791318 - MIR SINE MIR 0 262 82 222 309 57 32 chr5 177294498 177294621 -25790911 - MIR SINE MIR -48 214 89 470 265 25 12 chr5 177295321 177295483 -25790049 - MER113 DNA MER1_type? -357 164 1 282 95 0 0 chr5 177295619 177295661 -25789871 - MADE1 DNA Mariner 0 80 39 21 0 0 0 chr5 177296045 177296066 -25789466 + AT_rich Low_complexity Low_complexity 1 21 0 1612 275 70 29 chr5 177296142 177296348 -25789184 - L1MC4a LINE L1 -1746 6062 5857 560 301 134 28 chr5 177296348 177296529 -25789003 - L1MB4 LINE L1 -323 5857 5696 1399 173 14 0 chr5 177296529 177296743 -25788789 + MER20 DNA MER1_type 1 217 -2 560 301 134 28 chr5 177296743 177297092 -25788440 - L1MB4 LINE L1 -484 5696 5271 386 211 26 59 chr5 177298344 177298496 -25787036 - L1ME LINE L1 -331 5790 5644 232 217 0 14 chr5 177298542 177298611 -25786921 - L1ME4a LINE L1 -11 6110 6043 652 189 0 0 chr5 177298611 177298722 -25786810 + FLAM_C SINE Alu 33 143 0 233 146 21 0 chr5 177298863 177298911 -25786621 + T-rich Low_complexity Low_complexity 2 50 0 1533 188 19 7 chr5 177299334 177299633 -25785899 - AluJb SINE Alu 0 310 9 371 356 45 17 chr5 177299670 177299847 -25785685 - MIR SINE MIR -77 185 4 298 259 264 10 chr5 177300185 177300378 -25785154 + MIR SINE MIR 8 249 -13 299 211 0 13 chr5 177300628 177300704 -25784828 + GA-rich Low_complexity Low_complexity 2 76 0 452 159 156 113 chr5 177301391 177301566 -25783966 + MER33 DNA MER1_type 1 171 -88 1220 265 33 46 chr5 177301573 177301877 -25783655 + L1M4 LINE L1 3782 4077 -2069 2194 122 14 0 chr5 177301877 177302173 -25783359 - AluSx SINE Alu -12 300 1 1220 265 33 46 chr5 177302173 177302412 -25783120 + L1M4 LINE L1 4077 4318 -1828 3817 133 28 12 chr5 177302416 177302783 -25782749 - L1PA15 LINE L1 -6 6159 5799 216 0 0 0 chr5 177302783 177302807 -25782725 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2025 138 3 0 chr5 177302807 177303089 -25782443 - AluSx SINE Alu -29 283 1 3817 133 28 12 chr5 177303089 177303293 -25782239 - L1PA15 LINE L1 -365 5800 5578 689 148 35 14 chr5 177303296 177303438 -25782094 + MER33 DNA MER1_type 174 318 -6 460 324 139 53 chr5 177303508 177303882 -25781650 + L2 LINE L2 2867 3272 0 223 314 93 34 chr5 177303951 177304069 -25781463 - L2 LINE L2 -23 3249 3125 1262 204 25 21 chr5 177304575 177304855 -25780677 - AluJo SINE Alu -5 307 27 930 121 8 0 chr5 177304855 177304987 -25780545 + AluSq/x SINE Alu 1 133 -180 2263 109 0 0 chr5 177305000 177305302 -25780230 + AluY SINE Alu 7 308 -3 432 241 68 82 chr5 177305702 177305922 -25779610 - MIR SINE MIR -39 223 7 1793 131 10 13 chr5 177305958 177306256 -25779276 - Ricksha DNA DNA -25 2829 2533 5107 168 17 17 chr5 177306256 177306552 -25778980 - L1P LINE L1 -2069 4077 3782 1709 136 86 4 chr5 177306552 177306831 -25778701 - AluJb SINE Alu -10 302 1 5107 168 17 17 chr5 177306831 177307490 -25778042 - L1P LINE L1 -2363 3783 3122 509 208 68 0 chr5 177307491 177307612 -25777920 + L1ME1 LINE L1 6048 6183 -1 475 169 0 13 chr5 177307665 177307742 -25777790 - Ricksha DNA DNA -378 2876 2801 * 2717 180 9 34 chr5 177307731 177307954 -25777578 - Ricksha DNA DNA -2641 605 378 2207 96 23 0 chr5 177307954 177308256 -25777276 - AluSx SINE Alu -3 309 1 2717 180 9 34 chr5 177308256 177308560 -25776972 - Ricksha DNA DNA -2868 378 91 2123 102 20 3 chr5 177309630 177309923 -25775609 + AluSg SINE Alu 1 298 -12 814 246 50 10 chr5 177310320 177310504 -25775028 - MER3 DNA MER1_type -2 207 13 2077 95 0 0 chr5 177310504 177310768 -25774764 - AluSg SINE Alu -14 296 33 814 246 50 10 chr5 177310768 177310782 -25774750 - MER3 DNA MER1_type -196 13 1 777 193 28 80 chr5 177311047 177311124 -25774408 + L1MD3 LINE L1 7794 7873 -122 2227 8 0 0 chr5 177311124 177311360 -25774172 - L1PA2 LINE L1 -4 6151 5916 777 193 28 80 chr5 177311360 177311494 -25774038 + L1MD3 LINE L1 7873 7994 -1 593 156 10 0 chr5 177312203 177312299 -25773233 + MER58 DNA MER1_type 2323 2419 -1 547 256 44 56 chr5 177312300 177312480 -25773052 + MIR SINE MIR 4 181 -81 580 260 160 18 chr5 177312609 177312828 -25772704 + MIR SINE MIR 13 262 0 332 247 22 107 chr5 177312843 177313021 -25772511 + MIR SINE MIR 33 195 -67 1477 129 39 126 chr5 177313115 177313448 -25772084 + AluJb SINE Alu 1 304 -8 196 224 0 82 chr5 177313509 177313558 -25771974 - MIR3 SINE MIR -12 196 152 2162 135 26 35 chr5 177313596 177313973 -25771559 - THE1C LTR MaLR 0 375 2 1846 153 0 14 chr5 177313973 177314254 -25771278 - AluJo SINE Alu -31 281 5 278 308 63 56 chr5 177314432 177314575 -25770957 - MIR3 SINE MIR -31 177 34 579 229 159 6 chr5 177315094 177315251 -25770281 + MER5A DNA MER1_type 9 189 0 397 281 29 82 chr5 177316231 177316402 -25769130 + MIR3 SINE MIR 38 199 -9 276 252 93 73 chr5 177316877 177317028 -25768504 + MIR SINE MIR 105 258 -4 215 288 100 0 chr5 177317269 177317349 -25768183 - MIR SINE MIR -89 119 32 328 318 78 26 chr5 177317476 177317630 -25767902 - L3 LINE CR1 -64 1513 1352 248 121 72 12 chr5 177317746 177317829 -25767703 + GA-rich Low_complexity Low_complexity 2 89 0 208 191 0 43 chr5 177317835 177317882 -25767650 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 1893 143 3 17 chr5 177318803 177319104 -25766428 + AluJo SINE Alu 6 302 -10 206 316 0 13 chr5 177319248 177319324 -25766208 - MIR SINE MIR -63 145 71 907 196 0 12 chr5 177319363 177319531 -25766001 + MER5A DNA MER1_type 3 168 -21 2321 117 0 0 chr5 177319680 177319988 -25765544 - AluSq SINE Alu -5 308 1 564 208 0 8 chr5 177321294 177321419 -25764113 - MER20B DNA MER1_type -1 782 659 1057 156 0 0 chr5 177321438 177321611 -25763921 - AluJo SINE Alu -16 296 124 1568 197 130 48 chr5 177321613 177322075 -25763457 - MER20B DNA MER1_type -111 672 173 995 92 0 23 chr5 177322445 177322575 -25762957 + FLAM_C SINE Alu 2 128 -5 363 255 38 9 chr5 177322946 177323052 -25762480 + MIR3 SINE MIR 92 200 -8 396 289 66 5 chr5 177324193 177324390 -25761142 - L1ME4a LINE L1 -235 5886 5678 2125 128 0 0 chr5 177324577 177324874 -25760658 + AluSx SINE Alu 1 297 -15 288 243 48 176 chr5 177324966 177325069 -25760463 - L1MC4a LINE L1 -1910 5898 5783 2143 96 0 17 chr5 177325069 177325361 -25760171 + AluSx SINE Alu 1 287 -25 288 243 48 176 chr5 177325361 177325569 -25759963 - L1MC4a LINE L1 -2025 5783 5656 1762 199 0 3 chr5 177325569 177325871 -25759661 - AluJb SINE Alu -11 301 1 288 243 48 176 chr5 177325871 177325995 -25759537 - L1MC4a LINE L1 -2152 5656 5518 269 246 49 57 chr5 177326743 177326865 -25758667 + MIR SINE MIR 92 212 -50 355 268 78 42 chr5 177327040 177327182 -25758350 + MER117 DNA MER1_type 2 148 -49 1709 148 3 69 chr5 177327363 177327695 -25757837 - AluJb SINE Alu 0 312 1 220 325 26 0 chr5 177327747 177327824 -25757708 - MIR3 SINE MIR -35 173 95 2371 82 0 32 chr5 177328398 177328714 -25756818 - AluSg SINE Alu -4 306 1 4366 201 64 68 chr5 177329037 177329205 -25756327 + L1MC4 LINE L1 6744 6911 -1131 1760 172 30 7 chr5 177329205 177329501 -25756031 - AluJb SINE Alu -7 305 3 4366 201 64 68 chr5 177329501 177330207 -25755325 + L1MC4 LINE L1 6911 7613 -429 2134 113 3 3 chr5 177330207 177330498 -25755034 + AluSp SINE Alu 1 291 -22 4366 201 64 68 chr5 177330498 177330927 -25754605 + L1MC4 LINE L1 7613 8042 0 280 287 65 19 chr5 177331707 177331815 -25753717 + MIR3 SINE MIR 50 162 -46 236 221 44 29 chr5 177331923 177331991 -25753541 - MER117 DNA MER1_type -116 81 13 433 216 82 8 chr5 177332538 177332672 -25752860 - L1MC5 LINE L1 -8 7953 7810 21 57 0 0 chr5 177332770 177332805 -25752727 + AT_rich Low_complexity Low_complexity 1 35 0 868 233 39 11 chr5 177332984 177333164 -25752368 + AluJo SINE Alu 109 293 -19 213 39 0 0 chr5 177333166 177333192 -25752340 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 383 324 44 0 chr5 177333647 177333783 -25751749 + MIR3 SINE MIR 16 157 -51 468 256 45 28 chr5 177334053 177334212 -25751320 + MER5A DNA MER1_type 16 163 -15 303 28 0 0 chr5 177334504 177334540 -25750992 + (TA)n Simple_repeat Simple_repeat 2 37 0 2277 121 0 3 chr5 177334544 177334857 -25750675 - AluSx SINE Alu 0 312 1 619 40 0 0 chr5 177335096 177335171 -25750361 - L1PA7 LINE L1 -363 5809 5735 2515 74 0 34 chr5 177335171 177335522 -25750010 + L1PA7 LINE L1 5816 6154 0 355 241 23 0 chr5 177335609 177335696 -25749836 + L2 LINE L2 3225 3313 0 297 270 57 11 chr5 177335752 177335850 -25749682 + MER5A DNA MER1_type 15 125 -62 227 67 0 0 chr5 177336605 177336635 -25748897 - MIR SINE MIR -64 144 115 2139 134 0 3 chr5 177336667 177336965 -25748567 + AluSx SINE Alu 1 297 -15 3383 153 58 10 chr5 177337514 177338121 -25747411 + L1PA16 LINE L1 5518 6153 -13 291 276 57 9 chr5 177338256 177338361 -25747171 + MIR SINE MIR 45 154 -108 220 240 215 16 chr5 177339142 177339263 -25746269 - MIR SINE MIR -5 257 113 2888 168 57 2 chr5 177339718 177340249 -25745283 - MER68 LTR ERV1 0 562 3 628 268 21 10 chr5 177340337 177340531 -25745001 - MER117 DNA MER1_type -1 196 1 1884 120 25 11 chr5 177340791 177341074 -25744458 + MER1B DNA MER1_type 53 339 0 2130 138 37 105 chr5 177341101 177341503 -25744029 - MSTB LTR MaLR 0 426 57 2292 119 0 0 chr5 177341503 177341813 -25743719 - AluSx SINE Alu -2 310 1 2130 138 37 105 chr5 177341813 177341867 -25743665 - MSTB LTR MaLR -369 57 1 34 65 0 0 chr5 177341926 177341988 -25743544 + AT_rich Low_complexity Low_complexity 1 62 0 195 310 0 0 chr5 177342528 177342586 -25742946 - L2 LINE L2 -5 3308 3251 307 161 32 145 chr5 177342752 177342876 -25742656 + MER102b DNA MER1_type 232 341 0 458 255 41 87 chr5 177342940 177343060 -25742472 - MER5A DNA MER1_type -2 187 78 1749 128 69 11 chr5 177343060 177343334 -25742198 - AluJo SINE Alu -22 290 1 458 255 41 87 chr5 177343334 177343409 -25742123 - MER5A DNA MER1_type -111 78 1 224 216 59 0 chr5 177343420 177343471 -25742061 + L2 LINE L2 3238 3291 -22 290 292 11 0 chr5 177343594 177343683 -25741849 - MIR3 SINE MIR -6 202 113 266 222 0 0 chr5 177343690 177343744 -25741788 - L2 LINE L2 -4 3268 3215 397 243 49 32 chr5 177344461 177344646 -25740886 + L2 LINE L2 2725 2912 -402 221 103 46 23 chr5 177345318 177345366 -25740166 + MIR SINE MIR 103 152 -56 294 289 0 12 chr5 177345431 177345514 -25740018 + MER5A DNA MER1_type 101 182 -7 2250 109 0 3 chr5 177345519 177345821 -25739711 + AluSg SINE Alu 1 301 -9 205 274 78 0 chr5 177346862 177346913 -25738619 + L2 LINE L2 3156 3210 -62 757 256 27 127 chr5 177346942 177347431 -25738101 - L2 LINE L2 0 3313 2874 366 295 0 9 chr5 177348601 177348713 -25736819 - MER5A DNA MER1_type -72 117 7 404 253 161 73 chr5 177348905 177349178 -25736354 + MER102a DNA MER1_type 33 329 -1 3985 167 47 106 chr5 177350533 177351094 -25734438 - L1MC1 LINE L1 -49 6284 5692 1581 170 56 7 chr5 177351094 177351364 -25734168 - AluSx SINE Alu -14 298 16 3985 167 47 106 chr5 177351364 177352854 -25732678 - L1MC1 LINE L1 -641 5692 4353 805 239 5 5 chr5 177352855 177353039 -25732493 - MIR SINE MIR -67 195 12 444 324 29 6 chr5 177354516 177354686 -25730846 - MIR SINE MIR -87 175 2 22 0 0 0 chr5 177355147 177355169 -25730363 + AT_rich Low_complexity Low_complexity 1 22 0 513 177 171 11 chr5 177356145 177356302 -25729230 + MER5A DNA MER1_type 4 189 0 441 0 0 0 chr5 177356472 177356521 -25729011 + (TG)n Simple_repeat Simple_repeat 2 50 0 1189 257 103 37 chr5 177357701 177357844 -25727688 - LTR33 LTR ERVL -3 518 386 1888 194 14 30 chr5 177357844 177358215 -25727317 + MLT1A1 LTR MaLR 1 365 0 1189 257 103 37 chr5 177358215 177358557 -25726975 - LTR33 LTR ERVL -135 386 1 2731 204 73 35 chr5 177358619 177358915 -25726617 - MER82 DNA MER2_type 0 653 370 1924 141 0 14 chr5 177358915 177359198 -25726334 + AluSx SINE Alu 1 279 -33 405 0 0 0 chr5 177359198 177359243 -25726289 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2731 204 73 35 chr5 177359243 177359573 -25725959 - MER82 DNA MER2_type -282 371 2 290 315 31 31 chr5 177359656 177359783 -25725749 - L2 LINE L2 -211 3061 2935 14697 120 31 26 chr5 177359898 177362200 -25723332 - Tigger2 DNA MER2_type 0 2718 406 2291 106 0 0 chr5 177362201 177362493 -25723039 + AluSx SINE Alu 1 292 -20 293 238 79 0 chr5 177362497 177362598 -25722934 - MIR SINE MIR 0 262 154 249 33 0 0 chr5 177362599 177362629 -25722903 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 566 179 0 0 chr5 177362631 177362726 -25722806 - AluSg/x SINE Alu -33 279 185 220 252 97 29 chr5 177363130 177363233 -25722299 + MIR SINE MIR 88 197 -65 582 280 17 0 chr5 177363369 177363544 -25721988 - AluSq SINE Alu -16 297 120 2152 88 11 4 chr5 177363712 177363984 -25721548 - AluSq SINE Alu -16 297 24 417 342 60 60 chr5 177364194 177364513 -25721019 - L2 LINE L2 -5 3267 2949 331 289 125 8 chr5 177364786 177364914 -25720618 - MIR3 SINE MIR -32 176 34 194 272 16 80 chr5 177365617 177365742 -25719790 - MIR SINE MIR -90 172 56 480 130 0 30 chr5 177365786 177365886 -25719646 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 1798 159 0 27 chr5 177365906 177366207 -25719325 - AluJo SINE Alu -11 301 9 278 321 28 0 chr5 177366581 177366690 -25718842 + L2 LINE L2 3200 3311 -2 320 209 11 22 chr5 177366956 177367047 -25718485 + (CGGGG)n Simple_repeat Simple_repeat 5 94 0 183 250 23 0 chr5 177369874 177369918 -25715614 + MIR SINE MIR 197 241 -21 224 407 23 0 chr5 177371205 177371382 -25714150 - L2 LINE L2 -1900 1414 1234 1198 248 95 10 chr5 177373337 177373748 -25711784 - HAL1 LINE L1 -4 2503 2058 2134 109 3 3 chr5 177373780 177374087 -25711445 - AluSq SINE Alu 0 307 1 382 246 164 0 chr5 177374160 177374282 -25711250 + MIR3 SINE MIR 53 194 -14 5637 183 82 35 chr5 177375087 177375151 -25710381 - L1MB8 LINE L1 -5 6173 6113 2239 108 17 0 chr5 177375151 177375448 -25710084 + AluSq SINE Alu 1 302 -11 5637 183 82 35 chr5 177375448 177376248 -25709284 - L1MB8 LINE L1 -65 6113 5352 802 146 24 0 chr5 177376248 177376371 -25709161 - FLAM_C SINE Alu -7 126 1 5637 183 82 35 chr5 177376371 177377825 -25707707 - L1MB8 LINE L1 -826 5352 3753 718 230 88 10 chr5 177377834 177378038 -25707494 - MIR SINE MIR -7 255 36 489 234 76 23 chr5 177378116 177378287 -25707245 - MER113 DNA MER1_type? -293 228 49 2235 121 10 0 chr5 177378323 177378629 -25706903 - AluSx SINE Alu -3 309 1 626 262 6 12 chr5 177378929 177379101 -25706431 + MER117 DNA MER1_type 1 171 -26 1882 112 37 7 chr5 177379127 177379396 -25706136 - MER7A DNA MER2_type -71 275 1 33 25 0 0 chr5 177379430 177379470 -25706062 + AT_rich Low_complexity Low_complexity 1 40 0 224 210 0 16 chr5 177379480 177379542 -25705990 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 350 339 8 8 chr5 177379744 177379868 -25705664 + MIR3 SINE MIR 9 132 -76 685 115 29 0 chr5 177380056 177380160 -25705372 + LTR54B LTR ERV1 1 107 -391 974 163 101 12 chr5 177380162 177380420 -25705112 + LTR54B LTR ERV1 216 496 -2 436 250 44 39 chr5 177380426 177380606 -25704926 - MIR SINE MIR -34 228 48 21 0 0 0 chr5 177381038 177381059 -25704473 + AT_rich Low_complexity Low_complexity 1 21 0 2040 92 0 88 chr5 177381747 177382052 -25703480 - AluSq SINE Alu -32 281 4 2021 225 108 46 chr5 177382167 177383057 -25702475 - L1MC5 LINE L1 -48 7913 6969 1811 283 94 19 chr5 177383190 177383608 -25701924 - L1MC4a LINE L1 -1582 6226 5841 2653 128 21 30 chr5 177383608 177384038 -25701494 - MSTB LTR MaLR 0 426 1 1811 283 94 19 chr5 177384038 177384410 -25701122 - L1MC4a LINE L1 -1967 5841 5377 530 261 96 14 chr5 177384628 177384846 -25700686 + MIR SINE MIR 27 262 0 24 0 0 0 chr5 177385576 177385600 -25699932 + AT_rich Low_complexity Low_complexity 1 24 0 331 294 39 59 chr5 177385600 177385780 -25699752 - L1MC4a LINE L1 -2912 3234 3035 338 295 34 60 chr5 177385819 177386168 -25699364 - L1MC4a LINE L1 -3203 2943 2604 208 268 54 80 chr5 177386557 177386669 -25698863 + MIR SINE MIR 92 200 -62 25 51 0 0 chr5 177387740 177387779 -25697753 + AT_rich Low_complexity Low_complexity 1 39 0 248 203 0 0 chr5 177387861 177387920 -25697612 + L1MC4 LINE L1 6650 6708 -1334 * 318 274 49 53 chr5 177387886 177388080 -25697452 - L1ME4a LINE L1 -157 5964 5770 240 35 0 0 chr5 177388080 177388109 -25697423 + (TA)n Simple_repeat Simple_repeat 1 29 0 318 274 49 53 chr5 177388109 177388199 -25697333 - L1ME4a LINE L1 -351 5770 5681 1691 186 75 49 chr5 177389267 177389339 -25696193 - MSTD LTR MaLR 0 396 327 1886 152 0 0 chr5 177389339 177389628 -25695904 + AluJo SINE Alu 1 289 -23 1691 186 75 49 chr5 177389628 177389941 -25695591 - MSTD LTR MaLR -69 327 1 202 217 202 93 chr5 177389984 177390113 -25695419 - L2 LINE L2 -2 3270 3128 * 688 281 44 35 chr5 177390107 177390335 -25695197 - MIR SINE MIR -24 238 9 528 282 29 30 chr5 177390519 177390713 -25694819 - MIR SINE MIR -50 212 19 2191 151 5 56 chr5 177390911 177391322 -25694210 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr5 177391333 177391355 -25694177 + AT_rich Low_complexity Low_complexity 1 22 0 2337 185 48 42 chr5 177391674 177392171 -25693361 - MLT1D LTR MaLR -1 504 5 250 236 18 0 chr5 177392550 177392605 -25692927 - MIR3 SINE MIR -1 207 152 571 279 76 6 chr5 177392613 177392771 -25692761 - MER5B DNA MER1_type -9 169 1 187 331 191 29 chr5 177392771 177392904 -25692628 - MIR3 SINE MIR -48 160 6 309 331 90 24 chr5 177392900 177393066 -25692466 + L2 LINE L2 3096 3272 0 22 80 0 0 chr5 177393357 177393407 -25692125 + AT_rich Low_complexity Low_complexity 1 50 0 2295 155 72 108 chr5 177393460 177393735 -25691797 - L1MB7 LINE L1 -52 6132 5849 2316 99 3 0 chr5 177393735 177394047 -25691485 - AluSp SINE Alu 0 313 1 2295 155 72 108 chr5 177394047 177394410 -25691122 - L1MB7 LINE L1 -335 5849 5517 365 273 76 30 chr5 177394410 177394542 -25690990 - MIR SINE MIR -77 185 48 492 18 0 0 chr5 177394543 177394600 -25690932 + (TATG)n Simple_repeat Simple_repeat 4 60 0 1920 141 0 0 chr5 177394600 177394884 -25690648 - AluSx SINE Alu -28 284 1 2636 167 110 73 chr5 177395204 177395903 -25689629 - LTR8A LTR ERV1 0 727 3 449 291 159 7 chr5 177396076 177396227 -25689305 - MER5A DNA MER1_type -1 188 15 22 70 0 0 chr5 177396783 177396826 -25688706 + AT_rich Low_complexity Low_complexity 1 43 0 228 246 46 0 chr5 177397014 177397079 -25688453 - L1ME4a LINE L1 -93 6028 5961 238 310 52 32 chr5 177397186 177397341 -25688191 - L1ME4a LINE L1 -1969 5839 5682 405 168 19 93 chr5 177397761 177397837 -25687695 + MER94 DNA DNA 1 68 -66 1857 162 3 0 chr5 177397837 177398140 -25687392 + AluJb SINE Alu 1 304 -8 405 168 19 93 chr5 177398140 177398170 -25687362 + MER94 DNA DNA 68 99 -35 358 258 151 103 chr5 177398387 177398832 -25686700 - L2 LINE L2 0 3313 2848 415 298 111 25 chr5 177398847 177399082 -25686450 + MIR SINE MIR 8 262 0 276 246 0 0 chr5 177399217 177399231 -25686301 + MER3 DNA MER1_type 34 47 -162 315 164 36 0 chr5 177399231 177399286 -25686246 - MER3 DNA MER1_type 0 209 153 205 77 51 26 chr5 177399302 177399341 -25686191 + A-rich Low_complexity Low_complexity 2 41 0 624 231 28 0 chr5 177399374 177399517 -25686015 - MER3 DNA MER1_type -55 154 8 207 217 67 0 chr5 177399634 177399694 -25685838 + CT-rich Low_complexity Low_complexity 2 65 0 839 182 5 75 chr5 177399747 177399868 -25685664 - L1MB8 LINE L1 0 6178 6077 1827 133 3 44 chr5 177399868 177400185 -25685347 - AluSx SINE Alu -8 304 1 839 182 5 75 chr5 177400185 177400277 -25685255 - L1MB8 LINE L1 -101 6077 5980 1049 197 32 0 chr5 177400392 177400610 -25684922 - L1MB8 LINE L1 -383 5795 5571 815 255 137 61 chr5 177400614 177401078 -25684454 + L2 LINE L2 2666 3188 -125 1998 111 7 4 chr5 177401078 177401383 -25684149 + AluSx SINE Alu 1 306 0 815 255 137 61 chr5 177401383 177401518 -25684014 + L2 LINE L2 3188 3311 -2 225 277 0 0 chr5 177401574 177401621 -25683911 - L2 LINE L2 -39 3274 3228 187 133 0 0 chr5 177401626 177401656 -25683876 + L2 LINE L2 3243 3272 0 2224 103 0 13 chr5 177401710 177402021 -25683511 + AluSc SINE Alu 1 307 -2 659 260 168 38 chr5 177402681 177403050 -25682482 - MLT1K LTR MaLR -3 585 169 644 190 9 0 chr5 177403107 177403223 -25682309 + FLAM_C SINE Alu 1 117 -26 632 264 50 77 chr5 177404590 177404851 -25680681 + MIR SINE MIR 9 262 0 280 289 207 7 chr5 177405414 177405549 -25679983 + L3 LINE CR1 1356 1517 -60 493 277 157 19 chr5 177405938 177406205 -25679327 - L1ME4a LINE L1 -204 5917 5614 3643 124 25 5 chr5 177406223 177406787 -25678745 - L1PB2 LINE L1 0 6151 5577 321 200 47 100 chr5 177406879 177406974 -25678558 - L1ME4a LINE L1 -25 6096 6010 1720 168 0 14 chr5 177406974 177407271 -25678261 - AluJo SINE Alu -19 293 1 321 200 47 100 chr5 177407271 177407325 -25678207 - L1ME4a LINE L1 -111 6010 5955 1789 123 7 50 chr5 177408066 177408366 -25677166 + AluJb SINE Alu 12 298 -14 285 280 65 0 chr5 177408385 177408478 -25677054 - MIR3 SINE MIR -29 179 81 488 264 89 8 chr5 177408797 177408987 -25676545 + MIR SINE MIR 39 249 -13 420 20 0 0 chr5 177409093 177409142 -25676390 + (TG)n Simple_repeat Simple_repeat 1 49 0 432 290 26 13 chr5 177410330 177410485 -25675047 + MIR SINE MIR 46 202 -60 660 269 35 25 chr5 177410494 177410695 -25674837 + MIR SINE MIR 47 249 -13 278 143 20 0 chr5 177410943 177410992 -25674540 + MIR SINE MIR 81 130 -78 273 263 26 0 chr5 177412511 177412587 -25672945 + GA-rich Low_complexity Low_complexity 2 79 0 643 254 79 6 chr5 177413360 177413537 -25671995 + MIR SINE MIR 2 191 -71 21 0 0 0 chr5 177414324 177414345 -25671187 + AT_rich Low_complexity Low_complexity 1 21 0 806 176 8 0 chr5 177414345 177414476 -25671056 - FLAM_C SINE Alu -1 132 1 248 265 0 15 chr5 177414556 177414563 -25670969 + (TA)n Simple_repeat Simple_repeat 2 8 -60 2971 189 86 7 chr5 177414563 177415166 -25670366 + MER82 DNA MER2_type 3 653 0 248 265 0 15 chr5 177415166 177415226 -25670306 + (TA)n Simple_repeat Simple_repeat 8 68 0 328 207 132 33 chr5 177415278 177415399 -25670133 - MER112 DNA MER1_type -29 231 99 859 127 48 0 chr5 177415410 177415536 -25669996 + FLAM_C SINE Alu 1 132 -1 425 203 188 14 chr5 177415638 177415776 -25669756 + MIR SINE MIR 72 233 -29 1971 176 81 7 chr5 177416004 177416424 -25669108 - L1MB8 LINE L1 -1 6177 5727 894 309 61 25 chr5 177416741 177417277 -25668255 + L1ME4a LINE L1 5279 5800 -321 2032 125 0 13 chr5 177417277 177417581 -25667951 + AluSx SINE Alu 13 312 0 894 309 61 25 chr5 177417581 177417691 -25667841 + L1ME4a LINE L1 5800 5905 -216 222 291 12 0 chr5 177417698 177417784 -25667748 + (TA)n Simple_repeat Simple_repeat 2 88 0 374 175 193 28 chr5 177418082 177418242 -25667290 + MIR SINE MIR 23 207 -55 1473 259 59 43 chr5 177418835 177419484 -25666048 - HAL1 LINE L1 -110 2397 1739 1097 204 52 16 chr5 177419464 177419773 -25665759 - L1MB8 LINE L1 -775 5371 5052 * 194 232 196 0 chr5 177420875 177420931 -25664601 + MER5C DNA MER1_type 7 73 -251 626 266 62 6 chr5 177421556 177421749 -25663783 + MIR SINE MIR 62 261 -1 347 369 18 6 chr5 177421865 177422033 -25663499 - MER5A DNA MER1_type -5 184 15 369 250 112 9 chr5 177422425 177422541 -25662991 + MIR SINE MIR 19 146 -62 416 289 0 0 chr5 177422685 177422782 -25662750 + MIR3 SINE MIR 64 160 -48 735 230 17 0 chr5 177423597 177423775 -25661757 - MIR3 SINE MIR -5 203 23 269 89 22 0 chr5 177424309 177424354 -25661178 + (TC)n Simple_repeat Simple_repeat 1 46 0 200 311 44 22 chr5 177424485 177424575 -25660957 + L3b LINE CR1 1480 1571 -12 788 192 17 29 chr5 177424857 177425029 -25660503 - MIR3 SINE MIR -15 193 24 723 94 0 0 chr5 177426206 177426302 -25659230 - AluSg/x SINE Alu -14 295 200 1334 144 0 116 chr5 177426302 177426594 -25658938 - AluJb SINE Alu -54 258 1 838 291 145 15 chr5 177427901 177428300 -25657232 - MER115 DNA AcHobo -241 452 2 2272 95 0 0 chr5 177428737 177429033 -25656499 + AluSx SINE Alu 1 296 -16 455 297 53 112 chr5 177429632 177429965 -25655567 - L2 LINE L2 -54 3218 2881 216 213 16 49 chr5 177429965 177430026 -25655506 + MIR SINE MIR 145 203 -59 455 297 53 112 chr5 177430026 177430296 -25655236 - L2 LINE L2 -391 2881 2597 1477 161 75 0 chr5 177430997 177431277 -25654255 - MER33 DNA MER1_type -22 302 2 362 382 25 25 chr5 177431282 177431486 -25654046 + L2 LINE L2 2714 2917 -397 249 271 248 0 chr5 177431611 177431695 -25653837 + MIR SINE MIR 96 158 -104 426 20 0 0 chr5 177431695 177431746 -25653786 + (TG)n Simple_repeat Simple_repeat 2 52 0 249 271 248 0 chr5 177431746 177431794 -25653738 + MIR SINE MIR 158 261 -1 * 409 241 129 71 chr5 177431783 177431953 -25653579 + L2 LINE L2 3133 3312 -1 250 200 20 20 chr5 177433317 177433367 -25652165 + L2 LINE L2 3212 3261 -11 644 204 101 139 chr5 177433674 177434090 -25651442 - L1MC4 LINE L1 -17 8025 7626 1486 149 0 8 chr5 177434100 177434348 -25651184 - AluJo SINE Alu -14 298 53 1784 157 51 24 chr5 177434348 177434680 -25650852 - MER61A LTR ERV1 -2 341 1 402 140 0 0 chr5 177434680 177434737 -25650795 - AluJo SINE Alu -254 58 2 599 219 179 7 chr5 177435225 177435376 -25650156 + MER45A DNA AcHobo 2 178 0 406 216 78 0 chr5 177435534 177435636 -25649896 + L1MD3 LINE L1 7116 7225 -770 * 1114 166 141 17 chr5 177435606 177435881 -25649651 + L1MB3 LINE L1 5877 6173 -10 2459 204 102 7 chr5 177435900 177436487 -25649045 + L1MC4a LINE L1 7164 7806 -2 752 253 37 20 chr5 177436507 177436720 -25648812 + MIR SINE MIR 3 215 -47 2023 107 0 0 chr5 177436720 177436990 -25648542 - AluSg SINE Alu -2 308 39 752 253 37 20 chr5 177436990 177437035 -25648497 + MIR SINE MIR 215 258 -4 260 206 149 28 chr5 177437222 177437329 -25648203 + HAL1b LINE L1 1229 1348 0 530 279 174 6 chr5 177437741 177438020 -25647512 + Charlie8 DNA MER1_type 3 1428 -989 423 223 27 125 chr5 177438758 177438982 -25646550 + MER102a DNA MER1_type 128 329 -1 375 225 103 7 chr5 177439321 177439470 -25646062 + MIR SINE MIR 10 147 -61 470 278 222 0 chr5 177439874 177440036 -25645496 + MIR SINE MIR 11 208 -54 197 352 66 0 chr5 177440851 177440942 -25644590 - MIR3 SINE MIR -107 101 5 220 373 0 29 chr5 177441168 177441270 -25644262 - L2 LINE L2 -219 3053 2955 224 294 126 28 chr5 177441317 177441460 -25644072 - L2 LINE L2 -464 2850 2694 1505 207 62 6 chr5 177441864 177442187 -25643345 + MER58B DNA MER1_type 1 341 0 1445 187 30 33 chr5 177442715 177443015 -25642517 + AluJo SINE Alu 1 299 -13 1703 222 32 28 chr5 177443360 177443829 -25641703 - MER113 DNA MER1_type? -49 472 2 267 353 75 0 chr5 177445075 177445208 -25640324 - MIR SINE MIR -96 166 24 206 275 109 43 chr5 177445708 177445846 -25639686 - MIR SINE MIR -2 260 114 1468 220 92 32 chr5 177447733 177448169 -25637363 + MLT1C LTR MaLR 6 467 0 386 260 0 47 chr5 177448169 177448294 -25637238 - MER117 DNA MER1_type -78 119 1 766 200 0 0 chr5 177448640 177448770 -25636762 + FLAM_A SINE Alu 8 137 -5 862 130 0 15 chr5 177449733 177449864 -25635668 - AluJb SINE Alu -52 260 132 2232 104 0 0 chr5 177449871 177450158 -25635374 - AluSx SINE Alu -25 287 1 241 158 0 0 chr5 177450159 177450197 -25635335 - AluJb SINE Alu -158 144 107 562 103 0 0 chr5 177450333 177450411 -25635121 + AluY SINE Alu 219 296 -15 705 126 0 0 chr5 177450423 177450526 -25635006 - AluJb SINE Alu -208 104 2 225 65 0 0 chr5 177450539 177450570 -25634962 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6285 158 55 5 chr5 177450574 177451407 -25634125 - L1PB1 LINE L1 0 6151 5361 198 0 0 0 chr5 177451407 177451429 -25634103 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6285 158 55 5 chr5 177451429 177452601 -25632931 - L1PB1 LINE L1 -790 5361 4048 211 299 47 28 chr5 177452934 177453041 -25632491 - MIR SINE MIR -46 216 108 191 271 0 17 chr5 177454047 177454106 -25631426 + MIR SINE MIR 89 146 -62 1441 221 73 40 chr5 177454134 177454610 -25630922 + MLT1D LTR MaLR 7 498 -7 292 132 57 0 chr5 177455430 177455483 -25630049 + L1MB4 LINE L1 6120 6175 -5 214 346 105 0 chr5 177456517 177456650 -25628882 - L3 LINE CR1 -122 1455 1309 625 307 41 5 chr5 177456832 177457050 -25628482 - MIR SINE MIR -14 248 23 1745 174 15 35 chr5 177457510 177457850 -25627682 - MLT1A1 LTR MaLR 0 365 33 728 161 21 88 chr5 177457898 177458090 -25627442 - L1ME2 LINE L1 -25 6139 5961 2161 125 7 7 chr5 177458993 177459297 -25626235 + AluSx SINE Alu 1 304 -8 406 268 63 0 chr5 177459441 177459568 -25625964 + MIR SINE MIR 113 247 -15 253 203 54 14 chr5 177459868 177459942 -25625590 - MIR3 SINE MIR -51 157 81 347 191 24 36 chr5 177460939 177461023 -25624509 - MER117 DNA MER1_type -7 190 108 442 270 59 20 chr5 177461225 177461377 -25624155 + MER117 DNA MER1_type 1 158 -39 523 232 158 5 chr5 177462404 177462594 -25622938 + MIR SINE MIR 38 256 -6 273 128 0 0 chr5 177462658 177462705 -25622827 + (TG)n Simple_repeat Simple_repeat 2 48 0 4801 134 12 31 chr5 177463258 177464056 -25621476 - LTR39 LTR ERV1 0 783 1 238 296 45 11 chr5 177465317 177465405 -25620127 + MIR3 SINE MIR 65 155 -53 423 217 36 65 chr5 177465954 177466092 -25619440 - MIR3 SINE MIR -48 160 27 232 274 0 0 chr5 177466717 177466790 -25618742 - HAL1b LINE L1 -3 1345 1273 1412 240 115 27 chr5 177467037 177467517 -25618015 - L1ME3 LINE L1 -2 6160 5639 752 224 166 7 chr5 177467529 177467827 -25617705 - L1ME3 LINE L1 -580 5582 5237 870 210 108 5 chr5 177468685 177468880 -25616652 - MER20 DNA MER1_type -3 216 2 294 267 89 0 chr5 177468880 177468981 -25616551 - MIR3 SINE MIR -47 161 52 2470 92 0 10 chr5 177469241 177469547 -25615985 - AluSx SINE Alu -9 303 1 2233 132 3 0 chr5 177470378 177470688 -25614844 - AluSx SINE Alu -1 311 1 354 282 58 35 chr5 177471262 177471371 -25614161 - MER5B DNA MER1_type 0 178 62 2277 107 3 0 chr5 177471371 177471670 -25613862 - AluSg SINE Alu -10 300 1 354 282 58 35 chr5 177471670 177471734 -25613798 - MER5B DNA MER1_type -116 62 1 1084 227 128 21 chr5 177471792 177472175 -25613357 + MER113 DNA MER1_type? 38 461 -60 511 262 155 23 chr5 177473640 177473949 -25611583 + L1MC4 LINE L1 7689 8038 -4 189 74 0 0 chr5 177474388 177474415 -25611117 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 330 86 24 chr5 177474516 177474725 -25610807 + L2 LINE L2 2673 2894 -420 15865 70 17 6 chr5 177475212 177477412 -25608120 + L1P LINE L1 2581 4805 -1341 17190 107 15 7 chr5 177477528 177480013 -25605519 - L1P LINE L1 -3502 2644 141 9354 107 20 2 chr5 177480131 177481448 -25604084 - THE1A-int LTR MaLR -240 1340 1 2759 78 0 11 chr5 177481448 177481807 -25603725 - THE1A LTR MaLR 0 355 1 1793 172 27 73 chr5 177482066 177482299 -25603233 - MLT1B LTR MaLR -1 389 182 2022 122 0 37 chr5 177482299 177482595 -25602937 - AluSg1 SINE Alu -24 285 1 1793 172 27 73 chr5 177482595 177482769 -25602763 - MLT1B LTR MaLR -208 182 1 3803 164 73 59 chr5 177482884 177483728 -25601804 + L1M4c LINE L1 16 871 -5513 232 215 185 0 chr5 177483871 177483936 -25601596 - Zaphod DNA AcHobo -243 3788 3712 3038 206 105 64 chr5 177483952 177484128 -25601404 - Zaphod DNA AcHobo -481 3550 3383 883 157 86 25 chr5 177484128 177484326 -25601206 + MER6B DNA MER2_type 1 210 0 3038 206 105 64 chr5 177484326 177485283 -25600249 - Zaphod DNA AcHobo -648 3383 2371 1023 290 39 7 chr5 177485297 177485580 -25599952 - Zaphod DNA AcHobo -3653 378 87 485 247 174 27 chr5 177485917 177486136 -25599396 + MIR SINE MIR 12 262 0 4491 176 61 19 chr5 177486244 177486288 -25599244 - L1MB3 LINE L1 0 6183 6142 2547 60 0 22 chr5 177486288 177486606 -25598926 - AluY SINE Alu 0 311 1 4491 176 61 19 chr5 177486606 177487922 -25597610 - L1MB3 LINE L1 -41 6142 4832 1415 150 77 0 chr5 177488074 177488321 -25597211 - MLT1C LTR MaLR -201 266 1 802 157 0 33 chr5 177488333 177488486 -25597046 + L1MB8 LINE L1 6031 6178 0 6437 109 56 31 chr5 177488796 177488916 -25596616 + L1MA1 LINE L1 4894 5010 -1292 2046 138 3 28 chr5 177488916 177489236 -25596296 + AluSx SINE Alu 1 312 0 6437 109 56 31 chr5 177489236 177489665 -25595867 + L1MA1 LINE L1 5010 5427 -875 1784 139 43 32 chr5 177489665 177489975 -25595557 + AluSx SINE Alu 1 313 0 6437 109 56 31 chr5 177489975 177490163 -25595369 + L1MA1 LINE L1 5427 5609 -693 2051 98 3 95 chr5 177490163 177490500 -25595032 + AluSx SINE Alu 1 306 -6 6437 109 56 31 chr5 177490500 177491131 -25594401 + L1MA1 LINE L1 5609 6302 0 612 284 52 71 chr5 177491309 177491690 -25593842 + L1MC4a LINE L1 5543 5916 -1892 276 241 45 18 chr5 177491795 177491907 -25593625 + L1ME4a LINE L1 5853 5967 -154 3504 160 99 5 chr5 177492252 177493002 -25592530 + L1M4c LINE L1 783 1602 -4782 15209 182 51 17 chr5 177493046 177493694 -25591838 + L1MA4A LINE L1 1 626 -6222 1404 229 17 13 chr5 177493694 177493995 -25591537 + AluJo SINE Alu 5 306 -6 15209 182 51 17 chr5 177493995 177497188 -25588344 + L1MA4A LINE L1 626 3973 -2875 18957 158 46 22 chr5 177497221 177497390 -25588142 + L1P4 LINE L1 1 164 -7437 2028 96 92 3 chr5 177497390 177497672 -25587860 + AluY SINE Alu 1 307 -4 18957 158 46 22 chr5 177497672 177500144 -25585388 + L1P4 LINE L1 164 2575 -5026 2890 3 0 0 chr5 177500144 177500448 -25585084 + AluYa5 SINE Alu 1 304 -7 18957 158 46 22 chr5 177500448 177502383 -25583149 + L1P4 LINE L1 2575 4462 -3139 2109 147 0 3 chr5 177502383 177502696 -25582836 + AluSx SINE Alu 1 312 0 18957 158 46 22 chr5 177502696 177504879 -25580653 + L1P4 LINE L1 4462 6926 -675 6478 162 42 8 chr5 177505006 177505184 -25580348 + L1MA4A LINE L1 4697 4868 -2137 2088 123 7 10 chr5 177505184 177505485 -25580047 + AluSx SINE Alu 1 300 -12 6478 162 42 8 chr5 177505485 177507027 -25578505 + L1MA4A LINE L1 4868 6505 -500 276 30 0 0 chr5 177507027 177507060 -25578472 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 6478 162 42 8 chr5 177507060 177507567 -25577965 + L1MA4A LINE L1 6505 6994 -11 322 175 0 0 chr5 177507577 177507634 -25577898 + L1M4c LINE L1 1604 1660 -4724 * 1680 105 4 0 chr5 177507632 177507870 -25577662 - L1PB1 LINE L1 -130 6021 5783 688 153 11 32 chr5 177507875 177508158 -25577374 + (TA)n Simple_repeat Simple_repeat 1 277 0 311 111 0 37 chr5 177508160 177508214 -25577318 - L1PB1 LINE L1 -357 5794 5743 413 103 90 0 chr5 177508214 177508292 -25577240 + L1PB1 LINE L1 6066 6150 -1 10184 109 9 1 chr5 177508320 177509744 -25575788 + L1P LINE L1 11 1446 -4700 5278 110 32 17 chr5 177509747 177510582 -25574950 + SVA Other Other 19 866 -520 6269 23 1 10 chr5 177511364 177512050 -25573482 + SVA Other Other 707 1386 0 955 157 14 60 chr5 177512145 177512362 -25573170 + L1PA16 LINE L1 5955 6161 -5 7319 65 5 2 chr5 177512390 177513343 -25572189 + L1P LINE L1 1400 2355 -3791 1838 33 0 0 chr5 177513343 177513554 -25571978 + L1PA5 LINE L1 5937 6151 -3 734 251 38 0 chr5 177513574 177513757 -25571775 + MER58 DNA MER1_type 1 190 -151 227 86 0 0 chr5 177513763 177513798 -25571734 + L1M4 LINE L1 1643 1677 -4707 1592 131 40 11 chr5 177514310 177514584 -25570948 + L1M4 LINE L1 1653 1934 -4450 331 121 152 101 chr5 177514584 177514624 -25570908 + Tigger2 DNA MER2_type 1 38 -2680 1976 156 3 10 chr5 177514624 177514932 -25570600 - AluJb SINE Alu -6 306 1 331 121 152 101 chr5 177514932 177514990 -25570542 + Tigger2 DNA MER2_type 38 104 -2614 469 150 12 0 chr5 177515148 177515228 -25570304 + L1M4 LINE L1 4027 4107 -2275 1137 92 0 0 chr5 177515377 177515519 -25570013 + AluSx SINE Alu 1 142 -171 1214 137 0 6 chr5 177515809 177515992 -25569540 + AluSx SINE Alu 121 302 -10 197 290 0 16 chr5 177516240 177516302 -25569230 - L3 LINE CR1 -2 1575 1515 780 252 65 9 chr5 177516738 177516968 -25568564 - MIR SINE MIR -1 261 19 29 0 0 0 chr5 177517448 177517477 -25568055 + AT_rich Low_complexity Low_complexity 1 29 0 194 180 120 0 chr5 177517500 177517550 -25567982 - L3 LINE CR1 -155 1422 1367 407 259 46 63 chr5 177517838 177518012 -25567520 - MIR3 SINE MIR -27 181 11 368 297 119 17 chr5 177518106 177518406 -25567126 + L1MC/D LINE L1 5592 5915 -247 2481 82 0 0 chr5 177519102 177519408 -25566124 + AluSx SINE Alu 1 306 -6 1306 167 0 9 chr5 177520664 177520880 -25564652 - AluJb SINE Alu -14 298 85 294 325 94 16 chr5 177520888 177521079 -25564453 + L1ME LINE L1 5492 5697 -424 2284 110 0 10 chr5 177521082 177521392 -25564140 + AluSx SINE Alu 1 307 -5 473 202 86 6 chr5 177523134 177523267 -25562265 + MIR SINE MIR 84 225 -37 225 171 0 0 chr5 177523297 177523338 -25562194 + (TAG)n Simple_repeat Simple_repeat 1 41 0 204 254 0 32 chr5 177524900 177524963 -25560569 + CT-rich Low_complexity Low_complexity 1 61 0 4310 168 89 15 chr5 177525734 177527088 -25558444 - L1MB3 LINE L1 -1 6182 4731 524 260 0 8 chr5 177529382 177529509 -25556023 + MER5A DNA MER1_type 64 189 0 199 132 309 0 chr5 177530668 177530736 -25554796 + MIR3 SINE MIR 114 202 -6 236 190 304 0 chr5 177530894 177530973 -25554559 - MER103 DNA DNA -1 165 63 635 172 33 0 chr5 177531016 177531138 -25554394 - THE1A LTR MaLR -2 353 228 204 280 0 0 chr5 177531388 177531438 -25554094 + C-rich Low_complexity Low_complexity 2 51 0 216 322 56 0 chr5 177531612 177531702 -25553830 + L2 LINE L2 3174 3268 -4 406 230 178 29 chr5 177531964 177532181 -25553351 + MIR SINE MIR 17 253 -9 185 0 0 39 chr5 177532781 177532807 -25552725 + (TAAAAA)n Simple_repeat Simple_repeat 2 26 0 230 325 0 0 chr5 177532857 177532937 -25552595 + MIR3 SINE MIR 125 204 -4 1144 212 67 39 chr5 177533225 177533678 -25551854 - MLT1D LTR MaLR -7 498 3 337 275 106 56 chr5 177533695 177533979 -25551553 + L1MC4a LINE L1 5607 5904 -1904 2035 143 3 0 chr5 177534164 177534465 -25551067 + AluSx SINE Alu 1 302 -10 545 233 23 0 chr5 177534489 177534622 -25550910 + L1ME3 LINE L1 6026 6161 -1 261 268 54 9 chr5 177535582 177535694 -25549838 + MIR SINE MIR 49 165 -97 2607 149 47 38 chr5 177535752 177535860 -25549672 - L1MB7 LINE L1 -19 6165 6060 2448 74 3 3 chr5 177535860 177536159 -25549373 - AluSg SINE Alu -11 299 1 2607 149 47 38 chr5 177536159 177536580 -25548952 - L1MB7 LINE L1 -124 6060 5631 1041 266 119 23 chr5 177536580 177537009 -25548523 + L2 LINE L2 2833 3302 -11 659 295 5 5 chr5 177537009 177537199 -25548333 - MIR SINE MIR -71 191 2 640 318 21 8 chr5 177537548 177537790 -25547742 - MIR SINE MIR -16 246 2 206 241 81 69 chr5 177537835 177537922 -25547610 + MIR SINE MIR 66 153 -109 501 252 15 7 chr5 177537981 177538116 -25547416 + MER103 DNA DNA 30 165 -1 1894 157 0 26 chr5 177538177 177538483 -25547049 + AluJo SINE Alu 1 298 -14 282 223 75 11 chr5 177538645 177538739 -25546793 - MIR SINE MIR -12 250 151 726 308 20 28 chr5 177538749 177538996 -25546536 + MIR SINE MIR 3 247 -15 2284 75 4 0 chr5 177539010 177539314 -25546218 + AluSp SINE Alu 2 306 0 390 280 25 20 chr5 177539344 177539477 -25546055 - MIR SINE MIR -67 141 13 216 0 0 0 chr5 177540021 177540045 -25545487 + (A)n Simple_repeat Simple_repeat 1 24 0 278 333 51 0 chr5 177540061 177540178 -25545354 - MIR3 SINE MIR -48 160 38 306 0 0 0 chr5 177540218 177540252 -25545280 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 492 252 22 82 chr5 177540491 177540748 -25544784 + MIR SINE MIR 21 259 -3 711 262 73 0 chr5 177540963 177541154 -25544378 + MIR SINE MIR 20 224 -38 2300 136 0 0 chr5 177541236 177541546 -25543986 + AluSx SINE Alu 1 310 -2 473 303 59 13 chr5 177541564 177541716 -25543816 + MIR3 SINE MIR 30 188 -20 507 312 79 0 chr5 177541848 177542037 -25543495 + MIR SINE MIR 15 218 -44 349 223 32 32 chr5 177542505 177542599 -25542933 + MIR SINE MIR 108 201 -61 1004 117 0 7 chr5 177542747 177542901 -25542631 - LTR32 LTR ERVL 0 471 319 1816 201 21 0 chr5 177543027 177543361 -25542171 - LTR32 LTR ERVL -116 355 15 239 286 33 0 chr5 177543367 177543458 -25542074 + MIR SINE MIR 38 131 -77 983 152 37 9 chr5 177543464 177543681 -25541851 - MER33 DNA MER1_type 0 363 141 742 149 98 98 chr5 177543681 177543875 -25541657 + MER20 DNA MER1_type 2 195 -24 460 240 0 0 chr5 177543882 177543978 -25541554 - MER33 DNA MER1_type -228 96 1 207 229 0 0 chr5 177544381 177544429 -25541103 - MIR3 SINE MIR -53 155 108 584 236 67 11 chr5 177544538 177544716 -25540816 + Zaphod DNA AcHobo 1 188 -3843 767 174 12 12 chr5 177544775 177544936 -25540596 + L1MA9 LINE L1 6152 6312 0 990 282 32 9 chr5 177544942 177545258 -25540274 + Zaphod DNA AcHobo 197 519 -3512 3033 122 67 33 chr5 177545363 177545432 -25540100 - LTR64 LTR ERVK 0 558 493 2253 92 0 0 chr5 177545432 177545714 -25539818 + AluSx SINE Alu 23 304 -8 3033 122 67 33 chr5 177545714 177546184 -25539348 - LTR64 LTR ERVK -65 493 1 215 283 76 54 chr5 177546251 177546343 -25539189 - MIR SINE MIR -65 143 50 267 310 20 20 chr5 177546376 177546476 -25539056 + MIR SINE MIR 1 100 -162 612 149 44 0 chr5 177546512 177546626 -25538906 + L1MD3 LINE L1 7877 7995 0 374 308 68 15 chr5 177546629 177546762 -25538770 + MIR SINE MIR 121 260 -2 609 281 70 10 chr5 177546896 177547095 -25538437 + MIR SINE MIR 42 252 -10 197 214 0 24 chr5 177547250 177547292 -25538240 + L2 LINE L2 3179 3219 -94 232 248 0 18 chr5 177547486 177547595 -25537937 + GA-rich Low_complexity Low_complexity 2 108 0 614 238 5 88 chr5 177548589 177548782 -25536750 - MIR SINE MIR -16 246 70 416 260 75 14 chr5 177549510 177549656 -25535876 + MIR3 SINE MIR 50 204 -4 773 259 42 13 chr5 177549876 177550112 -25535420 - MER102a DNA MER1_type 0 330 88 850 154 7 7 chr5 177550135 177550278 -25535254 + FLAM_C SINE Alu 1 143 0 375 336 15 30 chr5 177550326 177550460 -25535072 + MIR SINE MIR 9 140 -122 773 298 130 44 chr5 177551651 177552197 -25533335 - L2 LINE L2 0 3272 2690 660 240 20 73 chr5 177552332 177552536 -25532996 + MIR SINE MIR 48 240 -22 653 243 212 36 chr5 177552524 177552746 -25532786 - MIR SINE MIR 0 262 2 * 258 324 48 0 chr5 177553460 177553565 -25531967 + L3 LINE CR1 1146 1255 -322 462 351 57 32 chr5 177553569 177553817 -25531715 + MIR SINE MIR 9 262 0 447 384 90 8 chr5 177553841 177554107 -25531425 + L3 LINE CR1 1271 1558 -19 718 236 231 0 chr5 177554320 177554519 -25531013 + MIR SINE MIR 2 246 -16 499 286 12 25 chr5 177554529 177554690 -25530842 - MIR SINE MIR -22 240 82 837 286 33 9 chr5 177555200 177555443 -25530089 - MIR SINE MIR -15 247 2 189 0 0 0 chr5 177556544 177556565 -25528967 + (TTG)n Simple_repeat Simple_repeat 2 22 0 324 208 254 52 chr5 177558103 177558276 -25527256 - MIR SINE MIR -19 243 36 637 148 0 0 chr5 177558311 177558412 -25527120 - AluJo SINE Alu -11 301 201 674 202 0 8 chr5 177558414 177558533 -25526999 - AluJo SINE Alu -189 123 6 309 246 110 34 chr5 177558538 177558656 -25526876 + L2 LINE L2 3137 3263 -50 254 247 192 34 chr5 177558885 177559031 -25526501 - MIR SINE MIR -87 175 7 516 124 45 34 chr5 177559225 177559295 -25526237 + AluSx SINE Alu 2 75 -238 1485 89 21 0 chr5 177559295 177559486 -25526046 + AluSg/x SINE Alu 109 303 -7 516 124 45 34 chr5 177559486 177559504 -25526028 + AluSx SINE Alu 75 91 -222 189 286 0 82 chr5 177559504 177559586 -25525946 + MIR SINE MIR 163 237 -25 1571 166 99 0 chr5 177559586 177559899 -25525633 + MER2 DNA MER2_type 1 344 0 189 286 0 82 chr5 177559899 177559914 -25525618 + MIR SINE MIR 237 252 -10 440 159 0 230 chr5 177560916 177561155 -25524377 - MER92B LTR ERV1 0 636 453 634 203 118 11 chr5 177561156 177561343 -25524189 - MER67C LTR ERV1 -363 347 141 1096 186 88 96 chr5 177561347 177561744 -25523788 + MER92B LTR ERV1 243 636 0 348 273 72 29 chr5 177564614 177564753 -25520779 - MIR SINE MIR -69 193 49 3671 61 4 0 chr5 177565334 177565839 -25519693 - L1P LINE L1 -743 5403 4897 4604 50 0 7 chr5 177565839 177566398 -25519134 + L1PA7 LINE L1 5594 6149 -5 514 309 82 11 chr5 177566398 177566680 -25518852 + L1MC4a LINE L1 5596 5897 -1911 2298 108 3 0 chr5 177566818 177567113 -25518419 - AluSx SINE Alu -16 296 1 745 244 30 95 chr5 177567286 177567581 -25517951 + L2 LINE L2 3028 3303 -10 393 232 51 40 chr5 177568463 177568640 -25516892 - L1ME3A LINE L1 0 6170 5992 584 323 86 51 chr5 177568664 177569161 -25516371 + L2 LINE L2 2688 3202 -70 347 283 23 11 chr5 177569342 177569479 -25516053 + MIR SINE MIR 44 183 -79 1791 166 48 68 chr5 177569944 177570342 -25515190 + MLT1B LTR MaLR 1 390 0 183 197 14 28 chr5 177570342 177570407 -25515125 + CT-rich Low_complexity Low_complexity 22 85 0 416 286 103 16 chr5 177571017 177571202 -25514330 - L2 LINE L2 -212 3060 2860 2408 72 3 0 chr5 177571930 177572221 -25513311 + AluY SINE Alu 1 292 -19 446 154 11 11 chr5 177572793 177572884 -25512648 + L1 LINE L1 2303 2393 -3753 2343 109 0 3 chr5 177572884 177573187 -25512345 + AluSq SINE Alu 1 302 -11 404 260 116 33 chr5 177573209 177573390 -25512142 + MER117 DNA MER1_type 2 197 0 2380 107 0 3 chr5 177573792 177574102 -25511430 + AluSc SINE Alu 1 309 0 2321 105 0 0 chr5 177575190 177575484 -25510048 + AluSx SINE Alu 1 294 -18 233 283 20 61 chr5 177575764 177575863 -25509669 - MIR SINE MIR -27 235 141 263 330 34 42 chr5 177575931 177576049 -25509483 - MIR SINE MIR -35 227 111 213 364 132 0 chr5 177576633 177576891 -25508641 + L2 LINE L2 2392 2683 -631 208 358 74 55 chr5 177576938 177577209 -25508323 + L2 LINE L2 2807 3082 -190 190 333 0 0 chr5 177577252 177577303 -25508229 + MIR SINE MIR 207 257 -5 831 160 17 0 chr5 177577328 177577503 -25508029 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 249 83 0 0 chr5 177577510 177577546 -25507986 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 2042 117 0 46 chr5 177578175 177578482 -25507050 - AluSg1 SINE Alu -16 293 1 2338 113 0 0 chr5 177578814 177579115 -25506417 - AluSx SINE Alu -11 301 1 978 137 37 19 chr5 177579115 177579276 -25506256 - AluJo/FRAM SINE Alu -3 309 146 281 200 0 0 chr5 177579279 177579329 -25506203 - AluSg/x SINE Alu -117 185 136 627 263 79 4 chr5 177579333 177579573 -25505959 - L1MC4a LINE L1 -1895 5913 5656 185 94 31 0 chr5 177579655 177579687 -25505845 + (TTA)n Simple_repeat Simple_repeat 3 35 0 474 236 81 0 chr5 177579690 177579851 -25505681 - L1MC4a LINE L1 -2328 5480 5307 386 264 101 16 chr5 177580606 177580735 -25504797 - MIR SINE MIR -58 204 65 261 0 0 0 chr5 177580752 177580781 -25504751 + (CA)n Simple_repeat Simple_repeat 2 30 0 366 304 17 17 chr5 177580841 177580956 -25504576 - MIR SINE MIR -28 234 120 374 238 29 29 chr5 177580989 177581094 -25504438 - MIR SINE MIR -81 181 77 365 275 159 24 chr5 177581522 177581729 -25503803 + MIR SINE MIR 20 254 -8 276 212 0 0 chr5 177581827 177581893 -25503639 + (TA)n Simple_repeat Simple_repeat 2 67 0 795 216 87 37 chr5 177581921 177582162 -25503370 - MER46C DNA MER2_type -80 258 6 583 336 43 0 chr5 177582222 177582430 -25503102 + MIR SINE MIR 35 251 -11 2165 134 0 7 chr5 177582954 177583259 -25502273 - AluSx SINE Alu -9 303 1 578 154 0 0 chr5 177583392 177583483 -25502049 - AluSc SINE Alu -86 223 133 261 309 75 0 chr5 177584063 177584157 -25501375 - MIR SINE MIR -79 183 83 423 324 96 54 chr5 177584318 177584726 -25500806 + L2 LINE L2 2842 3266 -6 1898 135 0 29 chr5 177584947 177585228 -25500304 + AluSx SINE Alu 1 273 -39 189 343 9 37 chr5 177585497 177585605 -25499927 - L3 LINE CR1 -297 1280 1176 2722 48 0 3 chr5 177586353 177586686 -25498846 + L1PA5 LINE L1 5823 6154 0 1939 113 0 25 chr5 177587418 177587693 -25497839 - AluSx SINE Alu -6 306 39 2591 57 0 0 chr5 177588109 177588405 -25497127 + AluY SINE Alu 7 302 -9 339 280 187 22 chr5 177589610 177589792 -25495740 - MIR SINE MIR -50 212 1 326 323 89 24 chr5 177591194 177591318 -25494214 + L2 LINE L2 3133 3264 -8 1971 120 37 3 chr5 177591592 177591891 -25493641 + AluSx SINE Alu 1 309 -3 206 163 0 20 chr5 177592822 177592871 -25492661 + A-rich Low_complexity Low_complexity 5 52 0 409 259 112 29 chr5 177593037 177593207 -25492325 + L3 LINE CR1 1219 1402 -175 1397 218 56 37 chr5 177593348 177593459 -25492073 - L1MB8 LINE L1 0 6178 6071 2246 89 10 0 chr5 177593459 177593763 -25491769 + AluSp SINE Alu 1 307 -6 1397 218 56 37 chr5 177593763 177594059 -25491473 - L1MB8 LINE L1 -107 6071 5763 181 361 31 21 chr5 177594181 177594278 -25491254 + L3 LINE CR1 1479 1576 -1 360 242 55 55 chr5 177594579 177594707 -25490825 - MIR SINE MIR -122 140 13 298 301 110 29 chr5 177596877 177597013 -25488519 + L2 LINE L2 3109 3255 -17 253 197 0 132 chr5 177597196 177597272 -25488260 - L2 LINE L2 -6 3266 3201 375 250 18 150 chr5 177597488 177597590 -25487942 + MER117 DNA MER1_type 7 66 -131 2315 82 10 0 chr5 177597590 177597894 -25487638 - AluSq SINE Alu -6 307 1 375 250 18 150 chr5 177597894 177598011 -25487521 + MER117 DNA MER1_type 66 197 0 704 194 63 118 chr5 177598691 177598928 -25486604 - MER58A DNA MER1_type 0 224 1 2186 92 3 0 chr5 177599945 177600239 -25485293 - AluSq SINE Alu -18 295 1 1425 143 162 8 chr5 177600881 177601140 -25484392 - AluJo SINE Alu -3 299 1 227 223 43 64 chr5 177601698 177601792 -25483740 - Charlie4 DNA MER1_type -4 1957 1866 365 335 33 28 chr5 177602046 177602225 -25483307 + MIR3 SINE MIR 4 139 -69 233 234 43 0 chr5 177602432 177602479 -25483053 - L2 LINE L2 -86 3186 3138 474 263 0 0 chr5 177602481 177602580 -25482952 - L2 LINE L2 -13 3259 3161 236 336 101 0 chr5 177602620 177602739 -25482793 + MER117 DNA MER1_type 1 131 -66 499 291 103 0 chr5 177603666 177603841 -25481691 - MIR SINE MIR -15 247 55 851 92 42 0 chr5 177603848 177603968 -25481564 - L1PA11 LINE L1 0 6174 6050 188 231 26 0 chr5 177603970 177604009 -25481523 - MIR SINE MIR -195 67 28 2214 98 0 0 chr5 177604059 177604356 -25481176 + AluSx SINE Alu 1 297 -15 540 296 82 15 chr5 177604510 177604716 -25480816 - MIR SINE MIR -12 250 31 2508 126 35 35 chr5 177604887 177605316 -25480216 + MSTB1 LTR MaLR 4 432 0 192 268 0 0 chr5 177606282 177606323 -25479209 + MIR SINE MIR 47 87 -175 383 245 66 0 chr5 177606485 177606591 -25478941 - L2 LINE L2 -7 3306 3194 329 291 39 10 chr5 177606623 177606726 -25478806 - MIR SINE MIR -108 154 49 420 243 88 34 chr5 177606957 177607105 -25478427 - MIR3 SINE MIR -30 178 23 327 194 231 30 chr5 177607571 177607705 -25477827 + L1ME4a LINE L1 5783 5943 -178 186 43 0 0 chr5 177607707 177607730 -25477802 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 261 0 0 0 chr5 177607729 177607758 -25477774 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 48 0 0 chr5 177607929 177607971 -25477561 + AT_rich Low_complexity Low_complexity 1 42 0 2124 122 0 0 chr5 177608180 177608476 -25477056 - AluSx SINE Alu -16 296 1 2010 110 59 56 chr5 177608563 177608761 -25476771 - THE1C LTR MaLR 0 375 174 2386 79 0 0 chr5 177608761 177609065 -25476467 - AluY SINE Alu -7 304 1 2010 110 59 56 chr5 177609065 177609240 -25476292 - THE1C LTR MaLR -201 174 1 795 262 6 0 chr5 177610544 177610716 -25474816 - MER63A DNA MER1_type -11 199 27 534 257 158 0 chr5 177611047 177611199 -25474333 - MER5A DNA MER1_type -10 179 4 340 288 201 16 chr5 177611211 177611395 -25474137 - MIR SINE MIR -14 248 31 2860 174 22 13 chr5 177611599 177612150 -25473382 + MER74A LTR ERVL 3 558 0 389 272 94 42 chr5 177612541 177612732 -25472800 - MIR SINE MIR -5 257 57 1736 176 75 59 chr5 177612836 177612940 -25472592 + MLT1C LTR MaLR 5 106 -361 2178 124 0 0 chr5 177612940 177613246 -25472286 + AluSx SINE Alu 1 306 -6 1736 176 75 59 chr5 177613246 177613596 -25471936 + MLT1C LTR MaLR 106 466 -1 304 299 17 81 chr5 177613726 177613900 -25471632 - L2 LINE L2 0 3272 3110 2058 105 3 13 chr5 177615240 177615544 -25469988 + AluSc SINE Alu 1 301 -8 1896 145 0 0 chr5 177615741 177616047 -25469485 + AluSx SINE Alu 1 306 0 838 177 13 13 chr5 177616065 177616223 -25469309 + FRAM SINE Alu 1 156 -20 505 282 165 19 chr5 177616224 177616430 -25469102 - MIR SINE MIR -6 256 21 505 227 27 0 chr5 177616503 177616613 -25468919 + MIR3 SINE MIR 42 154 -54 337 331 73 9 chr5 177616641 177616816 -25468716 - MIR SINE MIR -64 198 16 933 87 48 0 chr5 177618118 177618244 -25467288 + AluSq/x SINE Alu 1 132 -180 2021 118 0 0 chr5 177618246 177618525 -25467007 + AluSx SINE Alu 1 279 -33 180 0 0 0 chr5 177618525 177618545 -25466987 + (CA)n Simple_repeat Simple_repeat 1 20 0 682 163 158 94 chr5 177618900 177619103 -25466429 - MER20 DNA MER1_type 0 219 4 33 25 0 0 chr5 177620061 177620101 -25465431 + AT_rich Low_complexity Low_complexity 1 40 0 2012 123 40 0 chr5 177620783 177621083 -25464449 + AluSq SINE Alu 1 312 -1 191 209 23 0 chr5 177621346 177621389 -25464143 + L3 LINE CR1 1528 1571 -6 238 303 92 18 chr5 177621697 177621806 -25463726 + L2 LINE L2 3197 3313 0 593 309 56 24 chr5 177621818 177622070 -25463462 + MIR SINE MIR 2 261 -1 234 191 0 0 chr5 177622418 177622460 -25463072 - MIR3 SINE MIR -21 187 146 * 309 198 147 35 chr5 177622456 177622572 -25462960 + L2 LINE L2 3144 3272 0 407 314 173 12 chr5 177622593 177622848 -25462684 - L3 LINE CR1 -53 1524 1229 * 575 199 46 30 chr5 177622818 177622949 -25462583 + MER5A DNA MER1_type 21 153 -36 251 148 56 37 chr5 177624360 177624414 -25461118 + LTR37B LTR ERV1 17 71 -397 1823 125 21 0 chr5 177624428 177624708 -25460824 + AluSx SINE Alu 1 286 -26 977 152 30 95 chr5 177624907 177625170 -25460362 + LTR37B LTR ERV1 198 443 -25 210 286 22 44 chr5 177625188 177625279 -25460253 + MIR SINE MIR 118 206 -56 * 446 268 202 18 chr5 177625273 177625441 -25460091 + MIR SINE MIR 53 251 -11 296 218 35 11 chr5 177625534 177625621 -25459911 + L1MC5 LINE L1 7832 7920 -41 188 347 40 0 chr5 177625626 177625701 -25459831 + MIR SINE MIR 76 153 -109 271 309 0 21 chr5 177627129 177627223 -25458309 + MLT1K LTR MaLR 2 93 -495 249 188 53 65 chr5 177627527 177627604 -25457928 - MIR SINE MIR -53 155 79 230 258 43 54 chr5 177627777 177627870 -25457662 + MIR SINE MIR 33 124 -84 293 269 21 21 chr5 177627908 177628001 -25457531 - L2 LINE L2 -10 3262 3170 857 266 36 13 chr5 177678626 177678904 -25406628 - MLT-int LTR MaLR -198 1505 955 1818 189 83 2 chr5 177679090 177679472 -25406060 - MLT1-int LTR MaLR -487 884 379 1588 142 132 10 chr5 177679479 177679790 -25405742 - MER21A LTR ERV1 -6 925 577 1507 136 54 112 chr5 177679797 177679876 -25405656 - MER21A LTR ERV1 -619 312 230 512 190 40 0 chr5 177679876 177679976 -25405556 + U6 snRNA snRNA 3 106 -1 1507 136 54 112 chr5 177679976 177680227 -25405305 - MER21A LTR ERV1 -701 230 1 506 116 0 58 chr5 177680228 177680263 -25405269 - MLT1-int LTR MaLR -1373 362 327 2409 206 89 12 chr5 177680263 177680861 -25404671 + LTR48B LTR ERV1 1 644 0 506 116 0 58 chr5 177680861 177680911 -25404621 - MLT1-int LTR MaLR -1408 327 282 2273 88 10 3 chr5 177681273 177681568 -25403964 - AluSp SINE Alu -16 297 1 1975 152 7 0 chr5 177681629 177681925 -25403607 - AluJb SINE Alu -14 298 1 2108 148 3 0 chr5 177682296 177682607 -25402925 - AluSx SINE Alu 0 312 1 559 165 220 0 chr5 177683036 177683145 -25402387 + FLAM_C SINE Alu 1 133 0 465 287 11 33 chr5 177683617 177683798 -25401734 - L2 LINE L2 -644 2670 2494 323 104 0 0 chr5 177685902 177685950 -25399582 - AluSc SINE Alu 0 299 252 2320 89 3 7 chr5 177686240 177686542 -25398990 - AluSx SINE Alu -11 301 1 1624 132 43 4 chr5 177686619 177686900 -25398632 + L1MA4A LINE L1 6011 6302 -1 700 264 52 36 chr5 177687238 177687488 -25398044 - MIR SINE MIR 0 262 9 223 315 37 19 chr5 177687492 177687600 -25397932 + MIR SINE MIR 44 153 -109 3094 210 35 22 chr5 177687703 177688427 -25397105 - L1M4 LINE L1 -5199 1343 611 668 68 47 21 chr5 177688431 177688671 -25396861 + (TA)n Simple_repeat Simple_repeat 1 246 0 21 36 0 0 chr5 177688676 177688704 -25396828 + AT_rich Low_complexity Low_complexity 1 28 0 451 177 51 0 chr5 177688704 177688783 -25396749 - FRAM SINE Alu -30 146 64 1013 117 0 0 chr5 177688888 177689025 -25396507 - AluSq/x SINE Alu -176 137 1 1881 153 0 38 chr5 177689614 177689928 -25395604 + AluJb SINE Alu 1 302 -10 394 214 8 92 chr5 177689960 177690071 -25395461 - L2 LINE L2 -6 3307 3207 1612 104 8 77 chr5 177690071 177690331 -25395201 - AluSq SINE Alu -71 242 1 394 214 8 92 chr5 177690331 177690350 -25395182 - L2 LINE L2 -106 3207 3188 461 305 85 5 chr5 177690587 177690787 -25394745 + MIR SINE MIR 24 239 -23 360 218 0 0 chr5 177691365 177691452 -25394080 + CT-rich Low_complexity Low_complexity 3 89 0 372 43 0 0 chr5 177691457 177691503 -25394029 + (A)n Simple_repeat Simple_repeat 1 46 0 180 188 24 35 chr5 177691527 177691612 -25393920 + GA-rich Low_complexity Low_complexity 2 85 0 402 71 18 0 chr5 177691746 177691802 -25393730 - Alu SINE Alu -243 57 1 281 71 71 0 chr5 177691802 177691843 -25393689 - MLT1D LTR MaLR -385 120 77 344 290 148 7 chr5 177691965 177692120 -25393412 + MIR SINE MIR 36 212 -50 1596 153 0 89 chr5 177692178 177692491 -25393041 - AluJb SINE Alu -27 285 1 244 295 48 0 chr5 177692509 177692614 -25392918 - MIR SINE MIR -125 137 28 1881 193 8 6 chr5 177692840 177693202 -25392330 - MLT1A1 LTR MaLR -2 363 1 2119 113 7 0 chr5 177695216 177695529 -25390003 - AluSq SINE Alu 0 315 1 1506 181 0 60 chr5 177695556 177695855 -25389677 - AluJb SINE Alu -31 281 1 742 145 0 62 chr5 177696038 177696183 -25389349 - FLAM_C SINE Alu -6 137 2 2477 67 0 0 chr5 177696209 177696508 -25389024 - AluY SINE Alu -12 299 1 1584 145 0 57 chr5 177697048 177697142 -25388390 + AluJo SINE Alu 1 99 -213 3755 196 51 50 chr5 177697142 177698110 -25387422 + LTR5 LTR ERVK 1 969 0 1584 145 0 57 chr5 177698110 177698297 -25387235 + AluJo SINE Alu 99 266 -46 1862 139 10 7 chr5 177698889 177699190 -25386342 + AluSx SINE Alu 11 312 0 233 257 59 37 chr5 177699213 177699349 -25386183 - L1ME4a LINE L1 -105 6016 5878 2106 116 10 3 chr5 177699476 177699769 -25385763 - AluSx SINE Alu -17 295 1 2058 134 7 0 chr5 177700314 177700612 -25384920 + AluSx SINE Alu 5 304 -8 208 226 67 14 chr5 177701100 177701203 -25384329 - MIR SINE MIR -14 194 88 1185 118 0 0 chr5 177701346 177701499 -25384033 + AluSq SINE Alu 1 153 -160 225 133 0 0 chr5 177701508 177701553 -25383979 + Alu SINE Alu 255 299 0 201 62 62 0 chr5 177701628 177701660 -25383872 - MIR SINE MIR -112 150 117 279 270 11 0 chr5 177701751 177701840 -25383692 - L2 LINE L2 0 3272 3183 1554 112 18 0 chr5 177701901 177702125 -25383407 - AluSq SINE Alu -16 297 70 1952 144 0 0 chr5 177702748 177703026 -25382506 + AluSx SINE Alu 6 283 -29 2605 63 0 0 chr5 177703224 177703527 -25382005 - AluY SINE Alu -8 303 1 2159 126 0 13 chr5 177703619 177703921 -25381611 + AluSx SINE Alu 1 298 -14 251 183 0 108 chr5 177703988 177704081 -25381451 + MER5A DNA MER1_type 103 185 -4 219 321 95 15 chr5 177704197 177704334 -25381198 - MER5A DNA MER1_type -5 184 37 2099 142 0 13 chr5 177704369 177704678 -25380854 - AluSx SINE Alu -7 305 1 2099 94 54 3 chr5 177704695 177704993 -25380539 - AluSp SINE Alu 0 313 1 649 216 26 0 chr5 177705081 177705197 -25380335 - MER20 DNA MER1_type 0 219 101 1963 173 0 3 chr5 177705211 177705524 -25380008 + AluJb SINE Alu 1 312 0 203 283 50 0 chr5 177705723 177705783 -25379749 - MIR SINE MIR -118 144 82 717 91 10 0 chr5 177706008 177706107 -25379425 + AluS SINE Alu 2 101 -212 267 195 0 0 chr5 177706224 177706265 -25379267 - Tigger3(Golem) DNA MER2_type -2987 42 2 391 297 178 5 chr5 177706522 177706707 -25378825 + MIR SINE MIR 38 254 -8 21 71 0 0 chr5 177706966 177707008 -25378524 + AT_rich Low_complexity Low_complexity 1 42 0 2609 231 62 7 chr5 177707154 177707834 -25377698 - L1ME1 LINE L1 -5 6161 5445 272 204 19 0 chr5 177708051 177708105 -25377427 - L2 LINE L2 -2 3270 3216 185 321 0 0 chr5 177708331 177708387 -25377145 - MIR SINE MIR -45 217 162 317 263 0 0 chr5 177708392 177708468 -25377064 - MER116 DNA Mariner 0 80 5 270 205 295 27 chr5 177708473 177708585 -25376947 - MIR SINE MIR 0 262 121 187 182 91 0 chr5 177708723 177708767 -25376765 - MIR SINE MIR -71 137 90 5761 199 45 52 chr5 177708989 177709730 -25375802 - L1MC1 LINE L1 0 6613 5868 2287 120 0 0 chr5 177709730 177710038 -25375494 + AluSx SINE Alu 5 312 0 5761 199 45 52 chr5 177710038 177710463 -25375069 - L1MC1 LINE L1 -745 5868 5441 1483 205 3 35 chr5 177710463 177710780 -25374752 - AluJb SINE Alu -5 307 1 5761 199 45 52 chr5 177710780 177711366 -25374166 - L1MC1 LINE L1 -1172 5441 4852 2014 130 7 33 chr5 177711366 177711667 -25373865 - AluSx SINE Alu -19 293 1 5761 199 45 52 chr5 177711667 177711882 -25373650 - L1MC1 LINE L1 -1761 4852 4662 2265 147 81 2 chr5 177711882 177712276 -25373256 - MSTC LTR MaLR -1 427 3 5761 199 45 52 chr5 177712276 177712402 -25373130 - L1MC1 LINE L1 -1951 4662 4537 2047 141 3 10 chr5 177712436 177712742 -25372790 - AluSx SINE Alu -6 306 3 5945 195 111 53 chr5 177712746 177713965 -25371567 - L1MC1 LINE L1 -3270 3156 2009 2136 78 71 3 chr5 177713965 177714248 -25371284 + AluSc SINE Alu 1 302 -7 5945 195 111 53 chr5 177714248 177714322 -25371210 - L1MC1 LINE L1 -4417 2009 1941 2093 138 0 13 chr5 177714322 177714633 -25370899 - AluSx SINE Alu -5 307 1 5945 195 111 53 chr5 177714633 177715396 -25370136 - L1MC1 LINE L1 -4485 1941 924 1015 116 7 7 chr5 177715409 177715547 -25369985 + AluSq/x SINE Alu 1 138 -174 1466 175 48 0 chr5 177715548 177715817 -25369715 - L1MC1 LINE L1 -6125 301 20 322 259 60 17 chr5 177715987 177716103 -25369429 - MIR SINE MIR -65 197 77 494 158 21 0 chr5 177716344 177716439 -25369093 + MER5A DNA MER1_type 13 109 -80 198 0 0 0 chr5 177716456 177716478 -25369054 + (A)n Simple_repeat Simple_repeat 1 22 0 724 213 149 4 chr5 177717139 177717374 -25368158 - LTR37B LTR ERV1 -3 465 197 713 220 92 0 chr5 177717574 177717747 -25367785 - MER5A DNA MER1_type 0 189 1 317 179 0 0 chr5 177717765 177717821 -25367711 - LTR37B LTR ERV1 -406 62 7 * 398 270 63 31 chr5 177717804 177717963 -25367569 + Charlie8 DNA MER1_type 73 236 -2181 896 243 0 6 chr5 177718126 177718299 -25367233 + MER45A DNA AcHobo 1 172 -6 272 246 16 119 chr5 177718379 177718505 -25367027 - MIR3 SINE MIR -9 199 87 5600 88 14 5 chr5 177718916 177719674 -25365858 + L1PA16 LINE L1 5393 6157 -9 663 306 58 27 chr5 177719976 177720237 -25365295 + MLT1K LTR MaLR 195 463 -125 398 302 34 7 chr5 177720722 177720871 -25364661 + L1ME LINE L1 5565 5717 -404 2605 223 59 55 chr5 177720872 177720921 -25364611 - L1ME3A LINE L1 0 6170 6123 2379 84 0 3 chr5 177720921 177721218 -25364314 + AluSx SINE Alu 1 296 -16 2605 223 59 55 chr5 177721218 177722144 -25363388 - L1ME3A LINE L1 -47 6123 5191 1248 170 142 12 chr5 177722234 177722509 -25363023 + AluSg1 SINE Alu 1 307 0 444 243 56 7 chr5 177722512 177722656 -25362876 - L1ME3A LINE L1 -1062 5084 4934 2483 207 54 39 chr5 177722656 177723133 -25362399 + MER119 DNA MER1_type 1 490 -93 2060 104 14 21 chr5 177723133 177723421 -25362111 - AluSx SINE Alu -1 311 26 2483 207 54 39 chr5 177723421 177723514 -25362018 + MER119 DNA MER1_type 490 580 -3 1578 243 23 76 chr5 177723517 177723975 -25361557 + MLT1E LTR MaLR 1 425 -168 1756 181 7 0 chr5 177723975 177724267 -25361265 - AluJo SINE Alu -18 294 1 1578 243 23 76 chr5 177724267 177724376 -25361156 + MLT1E LTR MaLR 425 538 -55 330 234 0 0 chr5 177725136 177725200 -25360332 + MER112 DNA MER1_type 1 64 -196 2107 85 0 7 chr5 177726307 177726646 -25358886 - AluSq SINE Alu 0 352 16 1130 73 0 0 chr5 177727034 177727170 -25358362 + AluSq/x SINE Alu 1 136 -176 1821 120 7 14 chr5 177727170 177727445 -25358087 + AluSx SINE Alu 1 273 -39 256 296 12 12 chr5 177729166 177729247 -25356285 + MIR3 SINE MIR 81 161 -47 370 238 41 0 chr5 177729503 177729625 -25355907 - MIR SINE MIR 0 262 136 481 282 26 0 chr5 177729638 177729755 -25355777 + L2 LINE L2 3117 3236 -36 1924 133 0 11 chr5 177730178 177730510 -25355022 + AluSx SINE Alu 1 329 0 1923 134 33 0 chr5 177730516 177730791 -25354741 + AluSx SINE Alu 5 288 -24 327 283 28 35 chr5 177731072 177731217 -25354315 + MIR3 SINE MIR 41 184 -24 756 145 0 0 chr5 177731388 177731519 -25354013 + (TGGA)n Simple_repeat Simple_repeat 4 134 0 336 264 186 8 chr5 177731988 177732117 -25353415 + MIR SINE MIR 97 248 -14 351 113 0 0 chr5 177732201 177732254 -25353278 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1996 118 0 21 chr5 177732256 177732545 -25352987 - AluSx SINE Alu -29 283 1 2238 124 0 0 chr5 177732990 177733288 -25352244 + AluSx SINE Alu 1 298 -14 415 256 66 0 chr5 177733288 177733409 -25352123 + MIR SINE MIR 127 255 -7 450 0 0 0 chr5 177733467 177733517 -25352015 + (TG)n Simple_repeat Simple_repeat 2 51 0 1526 165 12 50 chr5 177733541 177733863 -25351669 + AluJo SINE Alu 3 312 0 507 127 0 0 chr5 177734026 177734105 -25351427 + AluS SINE Alu 224 302 -8 333 260 58 10 chr5 177734124 177734228 -25351304 + MIR SINE MIR 39 147 -61 231 213 46 0 chr5 177734275 177734383 -25351149 + (TA)n Simple_repeat Simple_repeat 1 113 0 207 0 0 0 chr5 177734383 177734406 -25351126 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 14370 50 12 8 chr5 177734406 177737022 -25348510 - L1PA4 LINE L1 -11 6144 3523 1208 168 152 20 chr5 177737167 177737470 -25348062 - MER4B LTR ERV1 -267 343 1 2432 238 112 91 chr5 177737472 177738434 -25347098 + L1M4 LINE L1 2894 3834 -2312 1139 200 19 0 chr5 177738434 177738644 -25346888 + MER58A DNA MER1_type 10 223 -1 2432 238 112 91 chr5 177738644 177739393 -25346139 + L1M4 LINE L1 3834 4798 -1348 241 234 4 18 chr5 177739402 177739473 -25346059 + AluJ/monomer SINE Alu 244 302 0 3461 143 6 43 chr5 177739478 177739546 -25345986 + MER4B LTR ERV1 1 70 -540 1722 194 0 3 chr5 177739546 177739911 -25345621 - AluJb SINE Alu 0 364 1 3461 143 6 43 chr5 177739911 177740469 -25345063 + MER4B LTR ERV1 70 606 -4 312 213 0 0 chr5 177740495 177740556 -25344976 + L1M4 LINE L1 4805 4865 -1281 416 101 58 0 chr5 177740740 177740809 -25344723 - MER41A LTR ERV1 -481 73 1 1522 97 4 61 chr5 177740809 177741056 -25344476 - MER41A-int LTR ERV1 -3 5943 5711 * 9727 133 38 25 chr5 177741043 177743808 -25341724 - MER41A-int LTR ERV1 -412 5534 137 405 100 86 14 chr5 177743935 177744005 -25341527 - MER41A-int LTR ERV1 -5757 1780 1706 * 2648 171 84 45 chr5 177743996 177744593 -25340939 - MER41A-int LTR ERV1 -5326 620 1 4220 98 0 0 chr5 177744660 177745213 -25340319 - MER41A LTR ERV1 -1 553 1 630 198 90 82 chr5 177745280 177745569 -25339963 + Charlie1 DNA MER1_type 1 286 -2475 2463 74 7 0 chr5 177745569 177745866 -25339666 - AluSx SINE Alu -13 299 1 630 198 90 82 chr5 177745866 177745929 -25339603 + Charlie1 DNA MER1_type 286 2761 0 231 235 0 44 chr5 177746181 177746249 -25339283 + MIR SINE MIR 198 262 0 477 319 110 57 chr5 177746281 177746664 -25338868 - L2 LINE L2 0 3272 2870 313 50 0 0 chr5 177746682 177746722 -25338810 + MADE1 DNA Mariner 41 80 0 667 269 111 33 chr5 177746729 177747063 -25338469 - L2 LINE L2 -461 2853 2494 26 74 0 0 chr5 177749558 177749612 -25335920 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr5 177749696 177749717 -25335815 + AT_rich Low_complexity Low_complexity 1 21 0 519 148 12 0 chr5 177749728 177749809 -25335723 - AluJ/FLAM SINE Alu -223 89 8 2215 111 0 0 chr5 177749953 177750242 -25335290 - AluSx SINE Alu -23 289 1 2329 75 3 20 chr5 177751892 177752186 -25333346 + AluY SINE Alu 1 289 -22 2360 81 3 3 chr5 177752391 177752689 -25332843 + AluSg SINE Alu 1 298 -12 872 147 80 6 chr5 177753443 177753606 -25331926 - AluSx SINE Alu -135 177 3 288 0 0 0 chr5 177753616 177753648 -25331884 + (TTG)n Simple_repeat Simple_repeat 3 34 0 213 94 0 0 chr5 177754058 177754090 -25331442 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2270 119 0 0 chr5 177754411 177754714 -25330818 - AluSx SINE Alu -9 303 1 2202 115 3 0 chr5 177755129 177755415 -25330117 - AluSx SINE Alu -24 288 2 819 180 0 0 chr5 177755508 177755636 -25329896 - FLAM_C SINE Alu -1 132 5 469 235 60 80 chr5 177755665 177756011 -25329521 - LTR35 LTR ERV1 0 671 342 362 186 59 68 chr5 177756191 177756309 -25329223 - LTR35 LTR ERV1 -500 118 2 22 35 0 0 chr5 177757436 177757465 -25328067 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 177757591 177757620 -25327912 + AT_rich Low_complexity Low_complexity 1 29 0 535 291 102 28 chr5 177757682 177757936 -25327596 - L2 LINE L2 -1 3312 3040 402 276 164 0 chr5 177758640 177758756 -25326776 - MER102b DNA MER1_type -26 315 181 2016 120 42 3 chr5 177758761 177759044 -25326488 + AluSx SINE Alu 9 302 -10 356 244 49 63 chr5 177759152 177759334 -25326198 - MER5A DNA MER1_type -7 182 4 2327 89 0 22 chr5 177759590 177759904 -25325628 - AluSp SINE Alu -6 307 1 203 311 156 8 chr5 177760668 177760790 -25324742 - MIR SINE MIR -76 186 47 2341 114 0 0 chr5 177761097 177761404 -25324128 - AluSx SINE Alu -1 311 5 2181 105 0 0 chr5 177761802 177762078 -25323454 + AluSq SINE Alu 1 276 -37 215 178 22 0 chr5 177762163 177762208 -25323324 + (TA)n Simple_repeat Simple_repeat 2 47 0 1797 163 0 17 chr5 177762231 177762531 -25323001 + AluJb SINE Alu 1 295 -17 247 214 29 29 chr5 177763064 177763134 -25322398 - Charlie4 DNA MER1_type -9 1952 1883 528 174 184 0 chr5 177763423 177763532 -25322000 + FLAM_A SINE Alu 12 140 -2 230 234 0 78 chr5 177763597 177763661 -25321871 + L1MEd LINE L1 378 436 -5769 1702 147 90 0 chr5 177763663 177763942 -25321590 - AluSx SINE Alu -8 304 1 1442 93 26 0 chr5 177764123 177764316 -25321216 - AluSq SINE Alu -15 298 101 1412 222 88 58 chr5 177764324 177764672 -25320860 + L1MEd LINE L1 307 643 -5753 1660 141 83 28 chr5 177764672 177764962 -25320570 - AluJo SINE Alu -2 310 5 2323 79 3 16 chr5 177764965 177765270 -25320262 - AluSx SINE Alu -11 301 1 1412 222 88 58 chr5 177765270 177765381 -25320151 + L1MEd LINE L1 644 784 -5612 574 209 27 0 chr5 177765393 177765503 -25320029 + L1M4b LINE L1 8 120 -6739 555 156 22 0 chr5 177765503 177765593 -25319939 + FRAM SINE Alu 1 92 -84 513 258 5 68 chr5 177765700 177765890 -25319642 - L2 LINE L2 -208 3105 2928 417 217 172 38 chr5 177766395 177766552 -25318980 + MIR SINE MIR 47 224 -38 208 320 0 13 chr5 177767083 177767161 -25318371 + MIR3 SINE MIR 109 185 -23 2942 3 0 0 chr5 177767166 177767475 -25318057 - AluYa5 SINE Alu -2 309 1 2379 95 0 3 chr5 177767800 177768106 -25317426 - AluSc SINE Alu -4 305 1 26 30 0 0 chr5 177769421 177769454 -25316078 + AT_rich Low_complexity Low_complexity 1 33 0 459 206 96 15 chr5 177771189 177771325 -25314207 - MER103 DNA DNA -7 159 13 13535 76 2 0 chr5 177771584 177774122 -25311410 - L1PA7 LINE L1 -6 6148 3603 2278 100 0 16 chr5 177774794 177775103 -25310429 - AluSq SINE Alu -9 304 1 180 0 0 0 chr5 177775109 177775129 -25310403 + (TCCCC)n Simple_repeat Simple_repeat 1 20 0 2157 110 6 22 chr5 177775149 177775466 -25310066 - AluSx SINE Alu 0 312 1 680 301 32 0 chr5 177776846 177777065 -25308467 + MIR SINE MIR 36 261 -1 439 296 60 86 chr5 177777429 177777533 -25307999 + L1ME4a LINE L1 5513 5618 -503 2248 76 31 7 chr5 177777533 177777821 -25307711 + AluSg SINE Alu 1 295 -15 439 296 60 86 chr5 177777821 177777922 -25307610 + L1ME4a LINE L1 5618 5710 -411 2424 91 3 0 chr5 177777922 177778220 -25307312 + AluSx SINE Alu 1 299 -13 439 296 60 86 chr5 177778220 177778327 -25307205 + L1ME4a LINE L1 5710 5818 -303 23 0 0 0 chr5 177778681 177778704 -25306828 + AT_rich Low_complexity Low_complexity 1 23 0 1648 150 62 11 chr5 177778789 177779063 -25306469 - AluJb SINE Alu -23 289 2 2426 93 3 0 chr5 177779608 177779920 -25305612 + AluSp SINE Alu 1 313 0 2050 119 10 3 chr5 177780073 177780366 -25305166 - AluSx SINE Alu -17 295 1 1682 170 0 62 chr5 177781391 177781715 -25303817 - AluJo SINE Alu -8 304 1 1895 153 0 0 chr5 177782138 177782465 -25303067 + AluSx SINE Alu 5 312 0 1032 279 88 37 chr5 177783264 177783976 -25301556 - L2 LINE L2 -28 3285 2518 246 273 0 52 chr5 177783997 177784074 -25301458 + MIR SINE MIR 117 189 -73 1619 52 0 5 chr5 177784246 177784438 -25301094 - AluY SINE Alu -15 296 106 295 260 0 70 chr5 177784819 177784919 -25300613 - L2 LINE L2 0 3272 3180 1930 125 57 4 chr5 177784924 177785205 -25300327 + AluSx SINE Alu 1 296 -16 1024 191 73 143 chr5 177785372 177785621 -25299911 + LTR37B LTR ERV1 1 201 -267 2195 116 13 0 chr5 177785621 177785924 -25299608 + AluSx SINE Alu 1 307 -5 1024 191 73 143 chr5 177785924 177786165 -25299367 + LTR37B LTR ERV1 201 457 -11 405 263 134 11 chr5 177786168 177786347 -25299185 + L1ME4a LINE L1 5803 6003 -118 234 226 0 0 chr5 177786975 177787028 -25298504 - MIR3 SINE MIR -47 161 109 379 262 21 21 chr5 177787054 177787195 -25298337 + MIR3 SINE MIR 44 184 -24 339 25 0 0 chr5 177788598 177788638 -25296894 + (T)n Simple_repeat Simple_repeat 1 40 0 243 282 36 55 chr5 177788936 177789046 -25296486 - MIR SINE MIR -1 261 154 * 622 261 34 6 chr5 177789044 177789220 -25296312 - MIR SINE MIR -55 207 27 329 293 47 27 chr5 177789217 177789367 -25296165 - MIR3 SINE MIR -50 158 6 * 884 169 62 34 chr5 177789542 177789557 -25295975 - MLT1-int LTR MaLR -19 1716 1703 4266 92 7 39 chr5 177789557 177790081 -25295451 - MER4A LTR ERV1 0 600 98 2252 107 10 10 chr5 177790081 177790391 -25295141 + AluSx SINE Alu 1 310 -2 4266 92 7 39 chr5 177790391 177790486 -25295046 - MER4A LTR ERV1 -502 98 1 884 169 62 34 chr5 177790486 177790647 -25294885 - MLT1-int LTR MaLR -32 1703 1180 344 152 114 0 chr5 177790799 177790878 -25294654 + AluSc SINE Alu 212 299 0 250 214 7 186 chr5 177790964 177791104 -25294428 + L1ME LINE L1 4892 5006 -1140 1205 167 5 5 chr5 177791176 177791368 -25294164 - AluJo SINE Alu -120 192 1 2529 136 40 56 chr5 177791377 177791710 -25293822 + LTR24B LTR ERV1 47 363 -213 1576 211 27 0 chr5 177791710 177792004 -25293528 + AluJb SINE Alu 1 302 -10 2529 136 40 56 chr5 177792004 177792208 -25293324 + LTR24B LTR ERV1 363 569 -7 1338 214 7 45 chr5 177792210 177792663 -25292869 + L1ME LINE L1 5014 5450 -712 482 100 144 56 chr5 177792677 177792767 -25292765 + L1ME LINE L1 5566 5663 -501 223 209 44 66 chr5 177792801 177792892 -25292640 + MIR3 SINE MIR 72 160 -48 1370 215 117 37 chr5 177793071 177793466 -25292066 + L1ME1 LINE L1 5664 6103 -63 2127 121 10 0 chr5 177793466 177793764 -25291768 + AluSx SINE Alu 1 301 -11 1370 215 117 37 chr5 177793764 177793829 -25291703 + L1ME1 LINE L1 6103 6161 -5 472 242 132 21 chr5 177795122 177795312 -25290220 + L1ME LINE L1 5566 5776 -345 1937 101 10 10 chr5 177795408 177795704 -25289828 - L1MA4 LINE L1 -6 6294 5999 1916 113 17 63 chr5 177795754 177796056 -25289476 - AluSx SINE Alu -24 288 1 182 242 44 66 chr5 177796434 177796525 -25289007 + MIR3 SINE MIR 72 160 -48 489 261 55 24 chr5 177798669 177798834 -25286698 - MIR SINE MIR -62 200 31 213 121 0 0 chr5 177798894 177798927 -25286605 + (TTC)n Simple_repeat Simple_repeat 2 34 0 502 332 50 9 chr5 177799732 177799952 -25285580 + MIR SINE MIR 20 248 -14 401 332 26 5 chr5 177799967 177800160 -25285372 - L2 LINE L2 -4 3309 3113 1992 149 3 3 chr5 177800161 177800463 -25285069 - AluJb SINE Alu -10 302 1 2393 101 0 0 chr5 177800727 177801024 -25284508 - AluSg SINE Alu -13 297 1 208 307 13 13 chr5 177801064 177801139 -25284393 - MER5B DNA MER1_type -30 148 74 191 258 68 5 chr5 177801337 177801451 -25284081 - L2 LINE L2 -99 3214 3109 1554 266 92 6 chr5 177801451 177801918 -25283614 - MLT1J LTR MaLR 0 511 5 191 258 68 5 chr5 177801918 177801958 -25283574 - L2 LINE L2 -204 3109 2979 1234 164 5 5 chr5 177802088 177802296 -25283236 + AluSg/x SINE Alu 96 303 -6 468 285 61 12 chr5 177802871 177803036 -25282496 - MER5A DNA MER1_type -16 173 1 2258 98 3 23 chr5 177803132 177803438 -25282094 + AluSq SINE Alu 1 300 -13 2965 173 55 31 chr5 177803831 177804450 -25281082 - LTR27 LTR ERV1 0 636 3 602 144 8 96 chr5 177804451 177804576 -25280956 - MER81 DNA DNA 0 114 1 366 23 0 0 chr5 177804707 177804750 -25280782 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1434 113 0 30 chr5 177804750 177804980 -25280552 - AluSc SINE Alu -24 285 63 9161 56 4 52 chr5 177855116 177857063 -25228469 + L1PA6 LINE L1 4249 6154 0 4884 147 75 13 chr5 177857665 177858511 -25227021 + MER4D LTR ERV1 1 898 -5 460 227 145 68 chr5 177858639 177858935 -25226597 + MLT1L LTR MaLR 208 437 -74 881 164 26 0 chr5 177859048 177859200 -25226332 + FRAM SINE Alu 1 155 -21 799 141 16 0 chr5 177859224 177859352 -25226180 - THE1C LTR MaLR 0 375 246 14767 67 3 19 chr5 177859529 177861556 -25223976 + L1P LINE L1 53 2048 -4098 1258 163 38 100 chr5 177861770 177862090 -25223442 + AluJb SINE Alu 3 302 0 253 310 60 0 chr5 177862328 177862428 -25223104 + MIR SINE MIR 157 262 0 538 291 47 44 chr5 177862560 177862685 -25222847 + L1ME4a LINE L1 5584 5707 -414 2275 100 0 7 chr5 177862685 177862986 -25222546 - AluY SINE Alu -12 299 1 538 291 47 44 chr5 177862986 177863135 -25222397 + L1ME4a LINE L1 5707 5859 -262 22 35 0 0 chr5 177863182 177863211 -25222321 + AT_rich Low_complexity Low_complexity 1 29 0 243 184 11 126 chr5 177863227 177863314 -25222218 + MIR SINE MIR 126 202 -60 326 343 52 0 chr5 177863390 177863524 -25222008 - L2 LINE L2 -9 3263 3123 292 309 184 0 chr5 177863664 177863800 -25221732 - MER91A DNA MER1_type -35 161 1 183 368 0 0 chr5 177865391 177865448 -25220084 - MIR SINE MIR -1 261 205 238 276 0 26 chr5 177865536 177865612 -25219920 + MLT1H LTR MaLR 95 168 -381 3212 82 28 60 chr5 177865841 177866342 -25219190 + L1PB2 LINE L1 5666 6150 -1 475 221 15 90 chr5 177866528 177866795 -25218737 - THE1C LTR MaLR -128 247 1 370 188 34 51 chr5 177866985 177867102 -25218430 + Charlie8 DNA MER1_type 88 202 -2215 2316 171 58 18 chr5 177867930 177868375 -25217157 + MLT1C LTR MaLR 1 463 -4 729 45 0 0 chr5 177869102 177869190 -25216342 - L1MA1 LINE L1 -4 6298 6211 1770 136 50 19 chr5 177869290 177869607 -25215925 - THE1C LTR MaLR -48 327 1 2260 125 0 0 chr5 177870105 177870408 -25215124 - AluSx SINE Alu -9 303 1 4581 179 21 18 chr5 177870992 177871878 -25213654 + L1P LINE L1 5 893 -5253 363 279 137 2 chr5 177872068 177872255 -25213277 + MIR SINE MIR 9 262 0 21 21 0 64 chr5 177872334 177872381 -25213151 + AT_rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chr5 177872774 177872799 -25212733 + AT_rich Low_complexity Low_complexity 1 25 0 2145 107 0 10 chr5 177873630 177873921 -25211611 - AluSx SINE Alu -24 288 1 1067 184 9 19 chr5 177873946 177874158 -25211374 + AluJo SINE Alu 1 210 -102 212 261 29 14 chr5 177874267 177874336 -25211196 + (CA)n Simple_repeat Simple_repeat 2 71 0 292 230 15 37 chr5 177874780 177874915 -25210617 + T-rich Low_complexity Low_complexity 3 134 0 2122 136 0 0 chr5 177876485 177876780 -25208752 - AluSc SINE Alu -14 295 1 440 278 52 67 chr5 177876820 177877014 -25208518 - MLT1K LTR MaLR -34 554 364 1006 122 43 129 chr5 177877716 177877971 -25207561 - L1MA7 LINE L1 -303 5988 5756 2123 52 0 26 chr5 177877971 177878240 -25207292 + AluY SINE Alu 1 262 -49 480 35 0 0 chr5 177878433 177878491 -25207041 + (GA)n Simple_repeat Simple_repeat 1 58 0 259 288 92 65 chr5 177878494 177878647 -25206885 - MIR3 SINE MIR -36 172 16 538 232 40 73 chr5 177878896 177878991 -25206541 + MIR SINE MIR 91 179 -83 1826 65 119 8 chr5 177878991 177879252 -25206280 + AluSc SINE Alu 1 290 -19 538 232 40 73 chr5 177879252 177879333 -25206199 + MIR SINE MIR 179 261 -1 198 0 0 0 chr5 177879452 177879474 -25206058 + (A)n Simple_repeat Simple_repeat 1 22 0 204 346 0 0 chr5 177879666 177879718 -25205814 + L2 LINE L2 2578 2629 -685 292 275 87 58 chr5 177880323 177880461 -25205071 + MIR3 SINE MIR 34 175 -33 27 0 0 0 chr5 177881225 177881252 -25204280 + AT_rich Low_complexity Low_complexity 1 27 0 372 22 0 0 chr5 177881426 177881471 -25204061 + (TA)n Simple_repeat Simple_repeat 1 45 0 1045 172 0 0 chr5 177881474 177881637 -25203895 + FRAM SINE Alu 1 159 -17 434 211 266 0 chr5 177881667 177881776 -25203756 - MER82 DNA MER2_type -6 647 510 1860 129 6 28 chr5 177881804 177882121 -25203411 - AluSx SINE Alu -2 310 1 583 220 53 8 chr5 177882129 177882261 -25203271 - MER82 DNA MER2_type -222 431 294 1409 198 31 42 chr5 177882390 177882744 -25202788 + L1ME2 LINE L1 5670 6019 -145 603 175 132 9 chr5 177882746 177882860 -25202672 - MER5A DNA MER1_type -59 130 3 671 218 40 17 chr5 177883112 177883286 -25202246 + LTR16C LTR ERVL 299 476 -15 2640 110 31 6 chr5 177883349 177883704 -25201828 - THE1B LTR MaLR 0 364 1 584 105 13 0 chr5 177883967 177884043 -25201489 - FRAM SINE Alu -30 146 70 490 275 147 63 chr5 177885753 177886135 -25199397 + MLT1G LTR MaLR 142 590 0 256 223 62 80 chr5 177886294 177886406 -25199126 - L2 LINE L2 -102 3211 3102 195 317 79 40 chr5 177886875 177886976 -25198556 + L2 LINE L2 3141 3245 -27 192 97 0 0 chr5 177887087 177887118 -25198414 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 231 167 0 0 chr5 177887605 177887647 -25197885 + (CA)n Simple_repeat Simple_repeat 1 42 0 243 79 0 0 chr5 177888583 177888621 -25196911 + (GA)n Simple_repeat Simple_repeat 2 39 0 249 330 53 11 chr5 177888988 177889082 -25196450 - L2 LINE L2 -61 3211 3114 254 246 0 0 chr5 177889998 177890059 -25195473 + MIR SINE MIR 1 61 -201 235 266 116 58 chr5 177890067 177890240 -25195292 + L2 LINE L2 3130 3312 -1 270 341 58 3 chr5 177891755 177891903 -25193629 - MIR3 SINE MIR -6 202 47 184 369 78 19 chr5 177892723 177892826 -25192706 - L2 LINE L2 -38 3234 3126 22 35 0 0 chr5 177893586 177893615 -25191917 + AT_rich Low_complexity Low_complexity 1 29 0 376 335 13 24 chr5 177893768 177893941 -25191591 - MIR SINE MIR -65 143 23 6559 161 16 10 chr5 177895366 177897455 -25188077 + L1PA16 LINE L1 4061 6161 -5 626 109 0 22 chr5 177897581 177897673 -25187859 - AluSg/x SINE Alu -9 301 212 314 265 0 0 chr5 177898251 177898319 -25187213 + MIR3 SINE MIR 110 177 -31 1846 156 10 13 chr5 177899948 177900250 -25185282 - AluSx SINE Alu -11 301 1 2103 141 7 0 chr5 177900368 177900674 -25184858 - AluSx SINE Alu -4 308 1 233 250 106 39 chr5 177900928 177901032 -25184500 + L1MEc LINE L1 1628 1738 -4658 360 245 126 53 chr5 177901292 177901708 -25183824 + L1MEc LINE L1 2025 2439 -3776 1621 277 49 25 chr5 177901754 177902351 -25183181 + L1MEc LINE L1 2513 3137 -3078 2429 85 0 7 chr5 177902351 177902656 -25182876 + AluSp SINE Alu 1 303 -10 1621 277 49 25 chr5 177902656 177902875 -25182657 + L1MEc LINE L1 3137 3349 -2866 265 250 193 21 chr5 177902922 177903114 -25182418 + L1MEc LINE L1 3438 3662 -2553 395 337 17 11 chr5 177904220 177904398 -25181134 - L1ME LINE L1 -429 5692 5514 1010 172 50 10 chr5 177904801 177904999 -25180533 + AluJo SINE Alu 107 312 0 363 186 0 12 chr5 177905022 177905108 -25180424 - L1MA7 LINE L1 0 6291 6207 671 142 42 0 chr5 177905336 177905456 -25180076 - L1MA6 LINE L1 -80 6220 6096 325 254 111 56 chr5 177905519 177905645 -25179887 - MER5A DNA MER1_type -56 133 1 468 293 25 13 chr5 177905911 177906068 -25179464 - MLT1G1 LTR MaLR -7 588 430 531 260 32 13 chr5 177906163 177906317 -25179215 - MLT1H1 LTR MaLR -367 188 32 27 49 0 0 chr5 177906461 177906502 -25179030 + AT_rich Low_complexity Low_complexity 1 41 0 2267 120 0 0 chr5 177909002 177909311 -25176221 - AluSq SINE Alu -4 309 1 550 205 8 17 chr5 177909516 177909633 -25175899 + MLT1F LTR MaLR 1 116 -426 417 285 13 7 chr5 177909739 177909890 -25175642 + MER103 DNA DNA 13 164 -2 2217 111 0 7 chr5 177909970 177910268 -25175264 + AluSx SINE Alu 1 296 -16 194 353 15 0 chr5 177910274 177910342 -25175190 - L3 LINE CR1 -459 1118 1050 25 75 0 0 chr5 177910549 177910602 -25174930 + AT_rich Low_complexity Low_complexity 1 53 0 28 29 0 0 chr5 177910751 177910786 -25174746 + AT_rich Low_complexity Low_complexity 1 35 0 346 229 0 64 chr5 177910786 177910895 -25174637 - AluJb SINE Alu -1 301 200 856 195 71 148 chr5 177911046 177911384 -25174148 - LTR8 LTR ERV1 -415 312 1 4490 114 86 121 chr5 177911876 177913296 -25172236 + pTR5 LTR ERV1 743 2435 -3 236 182 0 18 chr5 177913704 177913759 -25171773 - MER115 DNA AcHobo -43 650 597 1940 138 3 23 chr5 177914827 177915131 -25170401 + AluSx SINE Alu 1 298 -14 2816 164 39 30 chr5 177915699 177916085 -25169447 - MER89 LTR ERV1 -9 550 156 1861 157 7 10 chr5 177916085 177916378 -25169154 + AluJb SINE Alu 1 292 -20 2816 164 39 30 chr5 177916378 177916533 -25168999 - MER89 LTR ERV1 -403 156 4 439 271 129 39 chr5 177916607 177916762 -25168770 - MER5A DNA MER1_type -5 184 16 216 0 0 0 chr5 177916944 177916968 -25168564 + (CA)n Simple_repeat Simple_repeat 1 24 0 372 163 133 10 chr5 177917167 177917265 -25168267 + L1 LINE L1 4785 4894 -1252 920 253 38 7 chr5 177917433 177917737 -25167795 + L1MC/D LINE L1 5210 5523 -745 1033 152 43 5 chr5 177917806 177917990 -25167542 + MER39B LTR ERV1 463 653 0 1327 158 91 82 chr5 177917990 177918074 -25167458 + L1MC3 LINE L1 6655 6737 -1048 2266 121 3 0 chr5 177918074 177918380 -25167152 - AluSx SINE Alu -5 307 1 1327 158 91 82 chr5 177918380 177918499 -25167033 + L1MC3 LINE L1 6737 6853 -932 234 0 0 0 chr5 177918499 177918525 -25167007 + (CA)n Simple_repeat Simple_repeat 1 26 0 2047 63 0 152 chr5 177918525 177918888 -25166644 + AluSc SINE Alu 1 308 -1 1327 158 91 82 chr5 177918888 177919011 -25166521 + L1MC3 LINE L1 6852 6986 -799 281 139 28 14 chr5 177919426 177919498 -25166034 + L1MD3 LINE L1 7000 7072 -923 1521 201 33 38 chr5 177919498 177919562 -25165970 - Charlie1b DNA MER1_type -2363 398 335 4118 136 36 22 chr5 177919562 177920251 -25165281 + LTR34 LTR ERV1 1 699 0 1521 201 33 38 chr5 177920251 177920585 -25164947 - Charlie1b DNA MER1_type -2426 335 2 1628 213 92 44 chr5 177920586 177921160 -25164372 + L1MC5 LINE L1 7330 7931 -30 22 0 0 30 chr5 177921642 177921658 -25163874 + AT_rich Low_complexity Low_complexity 1 16 -16 2089 146 0 0 chr5 177921658 177921966 -25163566 + AluSx SINE Alu 1 308 -4 22 0 0 30 chr5 177921966 177921982 -25163550 + AT_rich Low_complexity Low_complexity 16 32 0 694 160 0 0 chr5 177923053 177923159 -25162373 - Tigger7 DNA MER2_type 0 2587 2482 1038 221 52 5 chr5 177923160 177923373 -25162159 - Tigger7 DNA MER2_type -499 234 12 566 176 184 0 chr5 177923450 177923586 -25161946 + L1MA9 LINE L1 6119 6279 -33 2328 97 3 3 chr5 177923806 177924114 -25161418 + AluSx SINE Alu 1 308 -4 1101 161 0 0 chr5 177924114 177924282 -25161250 + AluSg/x SINE Alu 134 301 -11 260 333 85 33 chr5 177924812 177924965 -25160567 - L2 LINE L2 0 3272 3112 1870 104 26 78 chr5 177925883 177926190 -25159342 - AluSg SINE Alu -19 291 1 814 153 8 8 chr5 177926371 177926502 -25159030 + AluJo SINE Alu 94 224 -88 351 194 0 0 chr5 177926520 177926582 -25158950 + MLT1G1 LTR MaLR 534 595 0 230 257 79 30 chr5 177926624 177926725 -25158807 + LTR33 LTR ERVL 416 521 0 354 279 58 96 chr5 177927300 177927533 -25157999 + L1MC4a LINE L1 5446 5668 -453 2138 99 0 3 chr5 177927533 177927815 -25157717 - AluSx SINE Alu -19 293 13 354 279 58 96 chr5 177927815 177927890 -25157642 + L1MC4a LINE L1 5668 5744 -377 668 174 83 0 chr5 177927893 177928002 -25157530 + FLAM_C SINE Alu 1 118 -15 2295 97 7 0 chr5 177928039 177928349 -25157183 + AluSx SINE Alu 1 312 0 423 236 29 60 chr5 177928363 177928570 -25156962 + L1MC4a LINE L1 5737 5951 -170 745 242 0 0 chr5 177928703 177928835 -25156697 - FLAM_A SINE Alu -1 132 1 2110 131 0 10 chr5 177928840 177929145 -25156387 - AluSx SINE Alu -9 303 2 335 286 29 48 chr5 177930087 177930281 -25155251 - MIR SINE MIR -27 181 23 292 148 0 123 chr5 177930370 177930413 -25155119 - MIR SINE MIR -68 194 164 2368 95 3 0 chr5 177930413 177930718 -25154814 - AluSq SINE Alu -7 306 1 292 148 0 123 chr5 177930718 177930755 -25154777 - MIR SINE MIR -98 164 124 1117 181 5 0 chr5 177930981 177931186 -25154346 + L1M4 LINE L1 4843 5048 -1098 1183 158 41 14 chr5 177931222 177931443 -25154089 - pTR5 LTR ERV1 -2044 394 168 377 159 53 74 chr5 177931448 177931543 -25153989 - LTR30 LTR ERV1 -75 624 228 987 39 6 157 chr5 177931543 177931721 -25153811 - pTR5 LTR ERV1 -416 2022 1872 248 309 67 50 chr5 177931941 177932342 -25153190 - HAL1 LINE L1 -972 1535 1128 241 362 101 0 chr5 177933205 177933343 -25152189 + MIR SINE MIR 5 156 -106 863 274 142 32 chr5 177934599 177935070 -25150462 - LTR33A LTR ERVL 0 523 1 296 281 66 8 chr5 177935269 177935390 -25150142 + MER20 DNA MER1_type 88 215 -4 579 284 36 45 chr5 177935620 177935842 -25149690 - MIR SINE MIR -7 255 36 224 193 35 18 chr5 177936273 177936330 -25149202 - L2 LINE L2 -1 3312 3255 976 162 7 0 chr5 177936400 177936554 -25148978 + MER3 DNA MER1_type 47 201 -8 232 321 175 69 chr5 177936605 177936879 -25148653 - L2 LINE L2 -16 3256 2954 996 175 21 113 chr5 177936882 177937122 -25148410 - MER20 DNA MER1_type -1 218 1 2105 119 0 0 chr5 177937627 177937905 -25147627 - AluSg SINE Alu -32 278 1 295 300 9 18 chr5 177941024 177941134 -25144398 + GA-rich Low_complexity Low_complexity 2 110 0 189 0 0 0 chr5 177941944 177941965 -25143567 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2930 3 0 0 chr5 177942247 177942558 -25142974 - AluYa5 SINE Alu 0 311 1 216 0 0 0 chr5 177942724 177942748 -25142784 + (CAA)n Simple_repeat Simple_repeat 1 24 0 8186 35 2 1 chr5 177943055 177943951 -25141581 - MER11D LTR ERVK 0 897 1 180 0 0 0 chr5 177945341 177945361 -25140171 + (A)n Simple_repeat Simple_repeat 1 20 0 2304 74 0 3 chr5 177945362 177945646 -25139886 + AluSq SINE Alu 1 283 -30 208 0 0 0 chr5 177945646 177945669 -25139863 + (TAAA)n Simple_repeat Simple_repeat 2 148 0 490 226 117 22 chr5 177946883 177947020 -25138512 - MLT1H LTR MaLR -306 243 94 1287 104 0 0 chr5 177947928 177948111 -25137421 - AluSp SINE Alu -3 310 128 961 211 4 52 chr5 177948258 177948509 -25137023 - AluJo SINE Alu -14 298 60 180 239 239 39 chr5 177948523 177948653 -25136879 + L2 LINE L2 2706 2861 -453 1992 244 71 25 chr5 177948686 177949195 -25136337 + MLT1H LTR MaLR 18 549 0 289 398 0 50 chr5 177949201 177949440 -25136092 + L2 LINE L2 2850 3076 -196 425 246 71 48 chr5 177949445 177949571 -25135961 + MER31B LTR ERV1 1 129 -337 2368 150 34 3 chr5 177949576 177949763 -25135769 + MSTD LTR MaLR 6 186 -210 1957 108 3 62 chr5 177949763 177950086 -25135446 + AluSx SINE Alu 1 304 -8 2368 150 34 3 chr5 177950086 177950208 -25135324 + MSTD LTR MaLR 186 332 -64 1897 160 3 10 chr5 177950208 177950520 -25135012 - AluJo SINE Alu -2 310 1 2368 150 34 3 chr5 177950520 177950588 -25134944 + MSTD LTR MaLR 332 396 0 1031 171 171 39 chr5 177950614 177950871 -25134661 + MER31A LTR ERV1 195 485 0 3509 153 15 70 chr5 177950877 177951608 -25133924 - LTR8 LTR ERV1 0 691 1 4121 137 26 8 chr5 177951708 177952357 -25133175 - MER50 LTR ERV1 -73 661 1 189 351 65 0 chr5 177952379 177952456 -25133076 + L2 LINE L2 3201 3282 -31 2039 192 61 25 chr5 177952456 177952899 -25132633 - LTR2B LTR ERV1 0 490 32 256 289 53 13 chr5 177952926 177953002 -25132530 + MIR SINE MIR 72 150 -58 442 346 22 0 chr5 177953012 177953197 -25132335 + MER117 DNA MER1_type 3 191 -6 375 248 109 90 chr5 177953335 177953482 -25132050 + MLT1J2 LTR MaLR 1 144 -306 3688 154 19 77 chr5 177953482 177953657 -25131875 - LTR8A LTR ERV1 0 727 544 2149 104 3 0 chr5 177953657 177953966 -25131566 - AluSq SINE Alu -3 310 1 3688 154 19 77 chr5 177953966 177954185 -25131347 - LTR8A LTR ERV1 -183 544 314 1689 124 91 4 chr5 177954185 177954460 -25131072 - AluSg SINE Alu -11 299 1 3688 154 19 77 chr5 177954460 177954835 -25130697 - LTR8A LTR ERV1 -413 314 1 375 248 109 90 chr5 177954835 177954953 -25130579 + MLT1J2 LTR MaLR 144 271 -179 1682 186 167 34 chr5 177954983 177955487 -25130045 - LTR49 LTR ERV1 0 595 25 2119 97 7 7 chr5 177955488 177955788 -25129744 + AluSq SINE Alu 1 300 -13 706 157 9 17 chr5 177955834 177955949 -25129583 - AluJb SINE Alu -196 116 3 2146 98 0 0 chr5 177956200 177956485 -25129047 + AluSq SINE Alu 1 285 -28 308 186 57 14 chr5 177956509 177956579 -25128953 - L1MCa LINE L1 -4358 2068 1996 * 343 333 0 0 chr5 177956562 177956652 -25128880 - L1MC4 LINE L1 -1339 6703 6614 204 235 0 0 chr5 177957812 177957863 -25127669 + T-rich Low_complexity Low_complexity 1 51 0 316 252 210 9 chr5 177957950 177958115 -25127417 - MIR SINE MIR -11 251 44 4562 107 14 0 chr5 177958438 177958555 -25126977 - MER41B LTR ERV1 -1 634 520 2050 135 0 6 chr5 177958555 177958867 -25126665 + AluSg SINE Alu 1 310 0 4562 107 14 0 chr5 177958867 177959374 -25126158 - MER41B LTR ERV1 -115 520 1 1054 145 36 6 chr5 177960755 177960921 -25124611 - MER20 DNA MER1_type -17 202 32 269 108 0 0 chr5 177960924 177960961 -25124571 + MER53 DNA DNA 1 37 -152 2242 69 0 0 chr5 177960961 177961250 -25124282 + AluY SINE Alu 1 289 -22 279 129 0 65 chr5 177961267 177961329 -25124203 + MER53 DNA DNA 15 72 -117 2055 116 0 10 chr5 177961329 177961631 -25123901 - AluSx SINE Alu -13 299 1 2404 47 10 0 chr5 177961733 177962034 -25123498 - AluY SINE Alu -7 304 1 282 94 0 57 chr5 177962112 177962165 -25123367 - AluSq/x SINE Alu -166 136 87 1380 143 0 13 chr5 177962267 177962491 -25123041 - AluSx SINE Alu -91 221 1 1481 230 91 9 chr5 177962539 177962869 -25122663 - LTR18A LTR ERVL 0 357 1 1872 144 0 13 chr5 177963140 177963438 -25122094 + AluSx SINE Alu 1 294 -18 719 221 90 14 chr5 177963929 177964218 -25121314 - L1MEc LINE L1 -4004 2392 2082 1769 96 0 4 chr5 177964236 177964476 -25121056 + AluSc SINE Alu 1 239 -70 287 367 70 0 chr5 177964643 177964771 -25120761 - L2 LINE L2 -13 3259 3123 1750 165 38 0 chr5 177965438 177965729 -25119803 + AluJb SINE Alu 1 302 -10 1251 244 3 7 chr5 177965731 177966030 -25119502 + AluSx SINE Alu 1 298 -4 673 151 8 8 chr5 177966280 177966399 -25119133 - L1MB3 LINE L1 -60 6123 6005 673 188 16 0 chr5 177966396 177966524 -25119008 + L1MC2 LINE L1 5649 5778 -555 561 157 19 9 chr5 177966616 177966724 -25118808 + L1MC2 LINE L1 5772 5880 -464 418 257 18 0 chr5 177966835 177966944 -25118588 + L1MDa LINE L1 1806 1916 -4624 678 225 14 0 chr5 177966964 177967106 -25118426 + MLT1F1 LTR MaLR 12 155 -412 * 2308 175 48 5 chr5 177967102 177967537 -25117995 + Tigger6a DNA MER2_type 38 491 -592 1245 80 11 32 chr5 177968295 177968483 -25117049 + THE1C-int LTR MaLR 1397 1580 0 756 149 15 15 chr5 177968483 177968617 -25116915 + THE1C LTR MaLR 1 134 -241 1341 147 35 124 chr5 177969532 177969702 -25115830 + LTR8A LTR ERV1 412 537 -190 2161 101 3 0 chr5 177969702 177970010 -25115522 + AluSq SINE Alu 1 309 -4 1341 147 35 124 chr5 177970010 177970186 -25115346 + LTR8A LTR ERV1 537 727 0 320 220 71 85 chr5 177970187 177970328 -25115204 - MLT1J2 LTR MaLR -304 146 8 1666 81 0 9 chr5 177970991 177971214 -25114318 + AluSx SINE Alu 1 221 -91 440 212 53 0 chr5 177971351 177971483 -25114049 + L1MDa LINE L1 2360 2498 -4042 845 130 0 43 chr5 177971486 177971624 -25113908 + FLAM_C SINE Alu 1 132 -11 471 280 11 5 chr5 177971625 177971814 -25113718 + L1MDa LINE L1 2529 2718 -4003 1121 79 0 67 chr5 177971814 177971979 -25113553 + AluSq SINE Alu 2 155 -158 3662 170 15 11 chr5 177972262 177972914 -25112618 + Tigger1 DNA MER2_type 2 656 -1762 504 123 0 0 chr5 177972915 177972988 -25112544 + AluS SINE Alu 2 74 -239 425 244 7 12 chr5 177973156 177973289 -25112243 + L1MC4a LINE L1 6611 6713 -1095 914 114 38 0 chr5 177973289 177973420 -25112112 + AluSq/x SINE Alu 1 136 -176 1968 132 0 3 chr5 177973421 177973710 -25111822 + AluSx SINE Alu 1 288 -24 366 202 22 115 chr5 177973712 177973867 -25111665 + L1MC5 LINE L1 7138 7275 -686 2397 155 10 0 chr5 177973867 177974253 -25111279 - MLT1B LTR MaLR 0 390 1 366 202 22 115 chr5 177974253 177974280 -25111252 + L1MC5 LINE L1 7275 7303 -658 1997 110 11 0 chr5 177974291 177974573 -25110959 + AluSq SINE Alu 1 285 -28 308 186 57 14 chr5 177974597 177974667 -25110865 - L1MCa LINE L1 -4358 2068 1996 * 343 333 0 0 chr5 177974650 177974740 -25110792 - L1MC4 LINE L1 -1339 6703 6614 1896 115 4 4 chr5 177975078 177975356 -25110176 - AluSx SINE Alu -34 278 1 217 146 0 36 chr5 177975751 177975806 -25109726 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1697 157 46 0 chr5 177976304 177976585 -25108947 - AluJb SINE Alu -18 294 1 231 281 101 11 chr5 177976622 177976711 -25108821 + MLT1F LTR MaLR 1 97 -445 2085 98 0 3 chr5 177976862 177977148 -25108384 - AluSq SINE Alu -28 285 1 2142 107 0 0 chr5 177977327 177977636 -25107896 - AluSq SINE Alu -4 309 1 1821 147 37 7 chr5 177977946 177978245 -25107287 + AluSx SINE Alu 1 308 -4 1934 124 24 7 chr5 177978247 177978537 -25106995 + AluSg SINE Alu 16 310 0 2073 111 0 0 chr5 177978543 177978862 -25106670 + AluSx SINE Alu 1 312 0 2257 94 28 3 chr5 177979137 177979235 -25106297 - L1PA10 LINE L1 -138 6030 5933 661 226 41 38 chr5 177979235 177979456 -25106076 - L1MB5 LINE L1 -249 5925 5706 1697 157 20 10 chr5 177979456 177979750 -25105782 + AluSx SINE Alu 1 297 -15 661 226 41 38 chr5 177979750 177979855 -25105677 - L1MB5 LINE L1 -468 5706 5293 253 0 0 0 chr5 177979857 177979886 -25105646 - U7 snRNA snRNA -33 30 2 747 180 11 11 chr5 177979887 177980065 -25105467 - L1MB5 LINE L1 -840 5306 5129 2023 97 10 0 chr5 177980072 177980362 -25105170 - AluY SINE Alu -18 293 1 24 0 0 0 chr5 177980381 177980405 -25105127 + AT_rich Low_complexity Low_complexity 1 24 0 1882 139 3 10 chr5 177980458 177980752 -25104780 + AluSx SINE Alu 1 292 -20 1682 188 0 13 chr5 177980755 177981059 -25104473 + AluJo SINE Alu 1 300 -12 2503 190 12 88 chr5 177981076 177981124 -25104408 - MLT2B3 LTR ERVL 0 554 504 450 0 0 0 chr5 177981124 177981174 -25104358 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 2503 190 12 88 chr5 177981174 177981523 -25104009 - MLT2B3 LTR ERVL -50 504 216 2416 74 3 0 chr5 177981523 177981835 -25103697 - AluSp SINE Alu 0 313 1 2503 190 12 88 chr5 177981835 177982036 -25103496 - MLT2B3 LTR ERVL -338 216 1 2109 107 0 13 chr5 177982046 177982355 -25103177 - AluSg SINE Alu -5 305 1 1935 128 3 13 chr5 177982356 177982654 -25102878 - AluSx SINE Alu -17 295 1 369 103 138 92 chr5 177982654 177982731 -25102801 - L1MB5 LINE L1 -1093 5053 4967 400 303 54 4 chr5 177982881 177983122 -25102410 - L1M4 LINE L1 -1890 4256 4004 * 1889 214 39 19 chr5 177983121 177983537 -25101995 - L1MC4a LINE L1 -944 6864 6441 208 179 54 18 chr5 177983582 177983638 -25101894 + GA-rich Low_complexity Low_complexity 4 61 0 1915 179 31 52 chr5 177983860 177984336 -25101196 - MER31B LTR ERV1 0 466 1 1148 109 56 204 chr5 177984846 177984994 -25100538 + MLT1B LTR MaLR 3 69 -321 2143 102 24 0 chr5 177984994 177985288 -25100244 - AluSx SINE Alu -11 301 1 1148 109 56 204 chr5 177985288 177985497 -25100035 + MLT1B LTR MaLR 69 307 -83 1743 136 0 0 chr5 177985637 177985902 -25099630 - AluSq SINE Alu -14 299 35 485 167 24 0 chr5 177986062 177986146 -25099386 + Alu SINE Alu 212 297 -13 262 170 38 0 chr5 177986442 177986495 -25099037 - MER117 DNA MER1_type -36 161 107 1789 137 14 14 chr5 177986752 177987045 -25098487 - AluSx SINE Alu -19 293 1 283 264 86 79 chr5 177987575 177987715 -25097817 - MIR3 SINE MIR -64 144 4 319 366 99 30 chr5 177988113 177988345 -25097187 - L2 LINE L2 -1027 2287 2040 319 264 0 0 chr5 177988394 177988466 -25097066 + L2 LINE L2 3242 3313 0 222 313 26 43 chr5 177988654 177988769 -25096763 + MIR SINE MIR 131 243 -19 489 275 135 33 chr5 177988770 177989014 -25096518 - L2 LINE L2 0 3313 3045 364 284 43 35 chr5 177989496 177989637 -25095895 + MIR SINE MIR 71 212 -50 695 122 17 44 chr5 177989848 177990029 -25095503 + CT-rich Low_complexity Low_complexity 4 179 0 740 146 0 7 chr5 177990040 177990062 -25095470 + (TTCC)n Simple_repeat Simple_repeat 1 22 -121 3605 53 0 7 chr5 177990062 177990513 -25095019 + LTR7 LTR ERV1 1 448 -2 740 146 0 7 chr5 177990513 177990634 -25094898 + (TTCC)n Simple_repeat Simple_repeat 22 143 0 956 180 21 5 chr5 177990634 177990823 -25094709 - AluJb SINE Alu -3 309 118 25 0 0 0 chr5 177990823 177990848 -25094684 + AT_rich Low_complexity Low_complexity 1 25 0 2148 123 0 0 chr5 177990852 177991162 -25094370 - AluSg SINE Alu 0 310 1 2101 95 14 0 chr5 177991169 177991454 -25094078 - AluSq SINE Alu -24 289 1 675 203 17 0 chr5 177991461 177991579 -25093953 - AluSq/x SINE Alu -189 124 5 2123 112 0 0 chr5 177991584 177991888 -25093644 - AluSx SINE Alu -2 310 7 1594 153 3 52 chr5 177991902 177992210 -25093322 - AluJb SINE Alu -19 293 1 1465 180 9 46 chr5 177992580 177992907 -25092625 + MER33 DNA MER1_type 10 324 0 229 254 0 0 chr5 177992907 177992961 -25092571 - MER117 DNA MER1_type -107 90 37 2054 101 47 3 chr5 177993056 177993354 -25092178 + AluSx SINE Alu 2 312 0 336 279 66 38 chr5 177993379 177993562 -25091970 - MER5A DNA MER1_type -1 188 1 215 295 26 26 chr5 177993592 177993670 -25091862 - MIR SINE MIR -106 102 25 252 59 0 0 chr5 177994009 177994043 -25091489 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 1241 142 30 109 chr5 177994045 177994348 -25091184 - AluJo SINE Alu -33 279 1 332 202 44 0 chr5 177994357 177994425 -25091107 + MIR SINE MIR 87 147 -61 261 269 104 0 chr5 177994493 177994560 -25090972 - MIR SINE MIR -103 105 32 246 330 53 0 chr5 177994721 177994815 -25090717 - L2 LINE L2 0 3272 3174 298 318 0 0 chr5 177994916 177995001 -25090531 - MIR SINE MIR 0 262 178 319 95 0 0 chr5 177995003 177995045 -25090487 - Alu SINE Alu -260 42 1 397 301 55 51 chr5 177995210 177995324 -25090208 + L1ME4a LINE L1 5819 5931 -190 1617 143 34 17 chr5 177995324 177995617 -25089915 + AluSx SINE Alu 1 298 -14 2166 97 3 0 chr5 177995617 177995915 -25089617 + AluY SINE Alu 1 299 -12 397 301 55 51 chr5 177995915 177996055 -25089477 + L1ME4a LINE L1 5930 6075 -46 385 241 37 107 chr5 177996083 177996135 -25089397 - L1MC4 LINE L1 -5 8037 7983 2124 112 13 3 chr5 177996135 177996436 -25089096 + AluSp SINE Alu 6 304 -9 385 241 37 107 chr5 177996436 177996599 -25088933 - L1MC4 LINE L1 -59 7983 7837 345 247 24 0 chr5 177996643 177996728 -25088804 - L1ME2 LINE L1 -10 6154 6068 465 133 0 0 chr5 177996749 177996824 -25088708 + (TCCCC)n Simple_repeat Simple_repeat 5 79 0 264 191 0 0 chr5 177996824 177996871 -25088661 - MER66A LTR ERV1 -145 333 287 2241 212 38 21 chr5 177996873 177997407 -25088125 - L1ME2 LINE L1 -189 5975 5433 2525 87 3 0 chr5 177997722 177998033 -25087499 + AluSp SINE Alu 1 312 -1 230 269 127 52 chr5 177998045 177998179 -25087353 + MIR3 SINE MIR 44 187 -21 400 310 0 9 chr5 177998366 177998482 -25087050 + MIR SINE MIR 37 151 -111 1047 100 0 3 chr5 177998676 177998885 -25086647 + AluSx SINE Alu 2 280 -32 267 152 0 0 chr5 177998885 177998931 -25086601 + (TA)n Simple_repeat Simple_repeat 2 47 0 297 311 128 14 chr5 177998931 177999079 -25086453 - MIR3 SINE MIR -13 195 31 2466 85 0 3 chr5 177999317 177999623 -25085909 + AluSx SINE Alu 1 305 -7 2062 150 10 0 chr5 178000178 178000484 -25085048 + AluSx SINE Alu 1 309 -3 692 106 15 23 chr5 178000723 178000855 -25084677 + (TTCC)n Simple_repeat Simple_repeat 1 131 0 1942 127 27 7 chr5 178000855 178001155 -25084377 - AluSq SINE Alu -7 306 1 199 250 0 0 chr5 178002000 178002048 -25083484 + MIR SINE MIR 150 197 -65 351 0 0 0 chr5 178002578 178002617 -25082915 + (TG)n Simple_repeat Simple_repeat 1 39 0 1734 157 0 7 chr5 178002673 178002947 -25082585 + AluJb SINE Alu 3 274 -38 252 59 0 0 chr5 178002974 178003008 -25082524 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1573 206 3 3 chr5 178003012 178003299 -25082233 - AluJo SINE Alu -25 287 1 241 343 131 0 chr5 178003307 178003406 -25082126 - L2 LINE L2 -6 3266 3155 1088 181 23 9 chr5 178003422 178003637 -25081895 + MLT1D LTR MaLR 1 218 -287 265 136 23 0 chr5 178003639 178003683 -25081849 + Alu SINE Alu 2 46 -255 557 261 39 0 chr5 178003885 178004015 -25081517 + L2 LINE L2 3138 3272 0 764 206 54 36 chr5 178004371 178004594 -25080938 - Charlie1 DNA MER1_type 0 2761 2535 500 217 133 0 chr5 178004602 178004722 -25080810 - Charlie1 DNA MER1_type -2623 138 3 1945 99 8 0 chr5 178004800 178005062 -25080470 + MER41A LTR ERV1 1 264 -290 4686 119 88 85 chr5 178005062 178006439 -25079093 + pTR5 LTR ERV1 743 2438 0 1491 67 20 2 chr5 178006440 178006689 -25078843 + MER41A LTR ERV1 259 554 0 4003 139 22 0 chr5 178006841 178007437 -25078095 + MER41A-int LTR ERV1 1 609 -5337 180 0 0 0 chr5 178007438 178007458 -25078074 + (TC)n Simple_repeat Simple_repeat 2 21 0 10380 151 34 54 chr5 178007458 178007860 -25077672 + MER41A-int LTR ERV1 1093 1501 -3514 2316 102 0 0 chr5 178007860 178008154 -25077378 - AluSq SINE Alu -17 296 3 10380 151 34 54 chr5 178008154 178008241 -25077291 + MER41A-int LTR ERV1 1501 1588 -3427 2040 128 3 3 chr5 178008241 178008530 -25077002 + AluSg SINE Alu 3 291 -19 10380 151 34 54 chr5 178008530 178009303 -25076229 + MER41A-int LTR ERV1 1588 2375 -2640 1546 66 31 10 chr5 178009303 178009499 -25076033 - AluSc SINE Alu -16 293 94 10380 151 34 54 chr5 178009499 178010886 -25074646 + MER41A-int LTR ERV1 2375 4514 -501 2030 139 13 0 chr5 178010886 178011188 -25074344 + AluSx SINE Alu 1 306 -6 2007 125 12 37 chr5 178011503 178011824 -25073708 + AluSq SINE Alu 1 313 0 2004 161 0 0 chr5 178011889 178012188 -25073344 + AluSx SINE Alu 1 299 -13 986 200 0 0 chr5 178012188 178012358 -25073174 + AluSg/x SINE Alu 132 301 -9 1619 234 57 30 chr5 178012493 178013251 -25072281 - L1M4 LINE L1 -1348 4798 4062 1053 239 23 0 chr5 178013251 178013469 -25072063 - MER58A DNA MER1_type -1 223 1 1619 234 57 30 chr5 178013469 178014247 -25071285 - L1M4 LINE L1 -2084 4062 3047 2106 129 0 0 chr5 178014279 178014574 -25070958 - AluSg SINE Alu -15 295 1 1921 199 86 29 chr5 178014761 178015203 -25070329 + MLT1C LTR MaLR 1 467 0 463 331 0 0 chr5 178015331 178015452 -25070080 - L2 LINE L2 0 3313 3193 1381 213 116 39 chr5 178015542 178015903 -25069629 + MLT1B LTR MaLR 2 390 0 2010 246 39 8 chr5 178016225 178016709 -25068823 - MLT1D LTR MaLR 0 505 7 2077 108 3 14 chr5 178016998 178017324 -25068208 - AluSx SINE Alu 0 312 1 717 202 12 46 chr5 178017332 178017505 -25068027 - L1MB7 LINE L1 -54 6130 5964 903 145 0 0 chr5 178017505 178017643 -25067889 - AluSg/x SINE Alu -5 305 168 662 278 87 54 chr5 178017670 178018059 -25067473 - L1MB7 LINE L1 -395 5775 5400 1525 184 16 16 chr5 178018059 178018189 -25067343 + AluJb SINE Alu 1 130 -182 246 32 0 0 chr5 178018189 178018220 -25067312 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1525 184 16 16 chr5 178018220 178018398 -25067134 + AluJb SINE Alu 129 309 -3 662 278 87 54 chr5 178018398 178018827 -25066705 - L1MB7 LINE L1 -770 5400 4915 1147 167 71 136 chr5 178018863 178019127 -25066405 + MLT1F LTR MaLR 213 493 -49 1854 133 45 3 chr5 178019127 178019413 -25066119 - AluSq SINE Alu -10 303 6 216 0 0 0 chr5 178019418 178019442 -25066090 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2063 115 0 14 chr5 178019444 178019730 -25065802 - AluSx SINE Alu -30 282 1 1147 167 71 136 chr5 178019730 178019744 -25065788 + MLT1F LTR MaLR 498 511 -31 2380 112 0 0 chr5 178019744 178020056 -25065476 - AluSx SINE Alu 0 312 1 1147 167 71 136 chr5 178020056 178020120 -25065412 + MLT1F LTR MaLR 511 542 0 353 269 11 21 chr5 178020619 178020712 -25064820 + L2 LINE L2 2977 3068 -204 741 280 68 61 chr5 178020792 178021310 -25064222 + MLT1L LTR MaLR 18 612 -3 210 150 0 0 chr5 178021531 178021571 -25063961 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 583 285 113 0 chr5 178021619 178021840 -25063692 + MIR SINE MIR 17 262 0 324 200 0 0 chr5 178023050 178023125 -25062407 + T-rich Low_complexity Low_complexity 4 78 0 2034 121 3 35 chr5 178023243 178023557 -25061975 - AluSx SINE Alu -5 307 4 788 182 0 78 chr5 178023649 178023803 -25061729 - FLAM_C SINE Alu 0 143 2 414 252 10 10 chr5 178023964 178024067 -25061465 - L2 LINE L2 -2 3311 3209 569 299 189 8 chr5 178024071 178024335 -25061197 - MLT1K LTR MaLR -87 501 190 502 299 116 0 chr5 178024352 178024499 -25061033 + MER91A DNA MER1_type 8 171 -25 388 299 97 39 chr5 178024507 178024661 -25060871 - MLT1K LTR MaLR -424 164 2 398 310 49 30 chr5 178024684 178024864 -25060668 + MIR3 SINE MIR 3 181 -62 438 343 91 24 chr5 178025268 178025522 -25060010 + L2 LINE L2 3000 3270 -2 21 0 0 0 chr5 178026173 178026194 -25059338 + AT_rich Low_complexity Low_complexity 1 21 0 3817 147 8 36 chr5 178026243 178026807 -25058725 - L1MB2 LINE L1 -2 6169 5591 180 0 0 0 chr5 178026807 178026827 -25058705 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2047 122 0 0 chr5 178026827 178027105 -25058427 - AluSg SINE Alu -31 279 2 3817 147 8 36 chr5 178027105 178027117 -25058415 - L1MB2 LINE L1 -579 5592 5581 831 194 0 0 chr5 178027117 178027246 -25058286 - FLAM_C SINE Alu -4 129 1 3817 147 8 36 chr5 178027246 178027312 -25058220 - L1MB2 LINE L1 -590 5581 5543 234 244 0 0 chr5 178027671 178027716 -25057816 + L2 LINE L2 3201 3245 -27 547 180 80 0 chr5 178028105 178028205 -25057327 - AluSc SINE Alu -25 284 177 1046 198 82 41 chr5 178028212 178028480 -25057052 - MLT1C LTR MaLR -188 279 1 281 238 24 0 chr5 178028483 178028567 -25056965 - L1MC4 LINE L1 -29 8013 7928 329 293 40 0 chr5 178028911 178029010 -25056522 + MLT1I LTR MaLR 279 381 -28 353 216 27 0 chr5 178029052 178029126 -25056406 - L1MC4 LINE L1 -370 7672 7597 2021 141 10 0 chr5 178029141 178029445 -25056087 - AluSx SINE Alu -5 307 1 1088 131 0 0 chr5 178029629 178029782 -25055750 - AluSp/q SINE Alu -7 306 154 1226 251 61 0 chr5 178029804 178030115 -25055417 - L1MC4 LINE L1 -1014 7028 6699 1723 162 14 3 chr5 178030116 178030406 -25055126 - AluSx SINE Alu -19 293 1 594 179 94 0 chr5 178030440 178030546 -25054986 + AluJb SINE Alu 2 117 -195 2945 138 35 27 chr5 178030569 178031061 -25054471 - LTR9B LTR ERV1 -84 560 62 2376 73 0 38 chr5 178031061 178031377 -25054155 + AluY SINE Alu 1 304 -7 2945 138 35 27 chr5 178031377 178031399 -25054133 - LTR9B LTR ERV1 -582 62 42 4411 124 6 29 chr5 178031400 178031806 -25053726 - HUERS-P3b LTR ERV1 -1 7417 7030 2264 107 0 3 chr5 178031806 178032104 -25053428 - AluSq SINE Alu -16 297 1 4411 124 6 29 chr5 178032104 178032349 -25053183 - HUERS-P3b LTR ERV1 -388 7030 6781 38778 83 8 13 chr5 178032360 178038532 -25047000 + L1PA6 LINE L1 11 6150 -4 23 33 0 0 chr5 178038549 178038579 -25046953 + AT_rich Low_complexity Low_complexity 1 30 0 12201 80 29 14 chr5 178038580 178039154 -25046378 - HUERS-P3b LTR ERV1 -624 6794 6230 2207 123 0 0 chr5 178039154 178039455 -25046077 - AluSx SINE Alu -11 301 1 12201 80 29 14 chr5 178039455 178040856 -25044676 - HUERS-P3b LTR ERV1 -1188 6230 4713 970 115 0 0 chr5 178040847 178040977 -25044555 - HUERS-P3b LTR ERV1 -3544 3874 3745 * 1120 175 19 14 chr5 178040977 178041188 -25044344 + AluJb SINE Alu 99 310 -2 216 316 92 13 chr5 178041387 178041463 -25044069 + MIR SINE MIR 59 140 -68 1635 169 14 7 chr5 178041686 178041982 -25043550 - AluJo SINE Alu -14 298 1 357 270 107 52 chr5 178042142 178042375 -25043157 + L1ME4a LINE L1 5753 5998 -123 207 0 0 0 chr5 178042514 178042537 -25042995 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 178042611 178042632 -25042900 + AT_rich Low_complexity Low_complexity 1 21 0 260 103 0 0 chr5 178043522 178043561 -25041971 + AluJ/FLAM SINE Alu 49 87 -215 202 143 24 0 chr5 178043562 178043604 -25041928 + T-rich Low_complexity Low_complexity 1 43 0 354 215 0 0 chr5 178043619 178043698 -25041834 + A-rich Low_complexity Low_complexity 1 79 0 1021 147 6 0 chr5 178043701 178043858 -25041674 + AluJb SINE Alu 132 289 -23 483 221 103 7 chr5 178043932 178044068 -25041464 - MIR SINE MIR -1 261 113 885 156 0 15 chr5 178044899 178045034 -25040498 - FLAM_C SINE Alu 0 133 1 1726 180 3 0 chr5 178045097 178045391 -25040141 + AluJo SINE Alu 4 298 -14 2245 124 0 0 chr5 178045509 178045808 -25039724 + AluSx SINE Alu 1 299 -13 432 200 59 157 chr5 178046268 178046343 -25039189 + MER102b DNA MER1_type 67 148 -1280 2298 94 3 3 chr5 178046343 178046641 -25038891 - AluSp SINE Alu -15 298 1 432 200 59 157 chr5 178046641 178046870 -25038662 + MER102b DNA MER1_type 148 341 0 188 371 0 0 chr5 178047485 178047555 -25037977 + MIR SINE MIR 63 132 -76 318 240 73 83 chr5 178047556 178047655 -25037877 + MER102b DNA MER1_type 152 250 -1178 2147 118 0 26 chr5 178047655 178047961 -25037571 - AluSx SINE Alu -14 298 1 318 240 73 83 chr5 178047961 178048053 -25037479 + MER102b DNA MER1_type 250 341 0 559 247 32 0 chr5 178048132 178048286 -25037246 + MIR SINE MIR 104 262 0 775 171 0 0 chr5 178048371 178048500 -25037032 - FLAM_A SINE Alu -4 129 1 185 289 0 0 chr5 178048511 178048556 -25036976 + L2 LINE L2 3215 3259 -13 1961 130 32 3 chr5 178048612 178048897 -25036635 + AluSx SINE Alu 1 293 -19 734 122 0 0 chr5 178050228 178050335 -25035197 - AluSx SINE Alu -12 298 192 1114 108 0 0 chr5 178050336 178050475 -25035057 - AluSx SINE Alu -172 141 3 227 211 0 28 chr5 178050536 178050607 -25034925 - L1MC4 LINE L1 -1339 6703 6635 2296 94 7 7 chr5 178052023 178052322 -25033210 + AluSp SINE Alu 1 299 -14 1969 151 7 0 chr5 178052327 178052618 -25032914 + AluSx SINE Alu 1 293 -19 182 279 198 18 chr5 178052954 178053065 -25032467 + MER5A DNA MER1_type 1 131 -58 1998 87 108 11 chr5 178053065 178053342 -25032190 - AluSg SINE Alu -6 304 1 2490 56 0 7 chr5 178053785 178054088 -25031444 - AluSg1 SINE Alu -8 301 1 23 54 0 0 chr5 178055187 178055224 -25030308 + GC_rich Low_complexity Low_complexity 1 37 0 42 20 0 0 chr5 178055354 178055403 -25030129 + GC_rich Low_complexity Low_complexity 1 49 0 1008 151 5 38 chr5 178057313 178057499 -25028033 + L1PA15 LINE L1 5985 6164 -1 21 0 0 0 chr5 178057530 178057551 -25027981 + AT_rich Low_complexity Low_complexity 1 21 0 1659 143 0 0 chr5 178058031 178058268 -25027264 + AluSx SINE Alu 1 237 -75 315 0 0 0 chr5 178059397 178059432 -25026100 + (TG)n Simple_repeat Simple_repeat 2 36 0 2220 121 80 0 chr5 178059753 178060092 -25025440 + LTR47A LTR ERVL 1 366 -86 221 299 75 9 chr5 178060801 178060908 -25024624 - MIR SINE MIR -73 189 76 300 188 0 0 chr5 178060965 178061029 -25024503 + (CA)n Simple_repeat Simple_repeat 2 65 0 953 143 13 7 chr5 178061510 178061664 -25023868 + AluJb SINE Alu 140 294 -18 2324 97 0 0 chr5 178062197 178062485 -25023047 - AluSx SINE Alu -24 288 1 1012 193 22 49 chr5 178063118 178063341 -25022191 + MER20 DNA MER1_type 1 217 -2 1895 86 116 11 chr5 178063566 178063833 -25021699 - AluSg1 SINE Alu -14 295 1 2249 102 10 3 chr5 178063967 178064272 -25021260 + AluSx SINE Alu 1 307 -5 586 254 123 18 chr5 178064382 178064602 -25020930 - MIR SINE MIR -8 254 12 363 255 41 20 chr5 178064604 178064702 -25020830 + MIR SINE MIR 50 149 -113 465 307 34 22 chr5 178064973 178065152 -25020380 + MER5A DNA MER1_type 2 182 -7 2446 83 3 0 chr5 178065815 178066117 -25019415 + AluY SINE Alu 1 303 -8 2529 63 3 0 chr5 178068289 178068591 -25016941 + AluY SINE Alu 1 303 -8 1916 121 52 3 chr5 178069519 178069809 -25015723 - AluSq SINE Alu -9 304 1 2098 128 0 0 chr5 178072285 178072583 -25012949 + AluSx SINE Alu 2 299 -13 1297 106 0 11 chr5 178072583 178072763 -25012769 + AluSg/x SINE Alu 135 312 0 311 280 95 13 chr5 178074475 178074649 -25010883 - MIR SINE MIR -43 219 34 2091 98 6 70 chr5 178074779 178075095 -25010437 + AluSg SINE Alu 1 296 -14 246 235 29 15 chr5 178076142 178076210 -25009322 + tRNA-Ile-ATT tRNA tRNA 6 74 -3 356 151 32 111 chr5 178076355 178076481 -25009051 + MER113 DNA MER1_type? 1 116 -405 257 207 49 24 chr5 178076552 178076634 -25008898 + MER113 DNA MER1_type? 133 216 -305 704 214 6 0 chr5 178077993 178078166 -25007366 + (CA)n Simple_repeat Simple_repeat 1 174 0 1031 214 0 0 chr5 178079356 178079534 -25005998 - MER45A DNA AcHobo 0 178 1 2668 39 0 23 chr5 178079989 178080299 -25005233 + AluY SINE Alu 1 303 -8 2309 95 0 7 chr5 178080378 178080673 -25004859 + AluSx SINE Alu 7 299 -13 2215 102 0 3 chr5 178080697 178080982 -25004550 + AluSc SINE Alu 1 284 -25 29 0 0 0 chr5 178080982 178081011 -25004521 + AT_rich Low_complexity Low_complexity 1 29 0 286 269 59 25 chr5 178081359 178081478 -25004054 + MIR SINE MIR 140 262 0 739 239 178 81 chr5 178081723 178081899 -25003633 - MLT1L LTR MaLR -4 611 454 1906 155 0 3 chr5 178081899 178082189 -25003343 - AluJb SINE Alu -23 289 1 739 239 178 81 chr5 178082189 178082557 -25002975 - MLT1L LTR MaLR -161 454 14 366 270 108 0 chr5 178082822 178082933 -25002599 + L2 LINE L2 3191 3313 0 2166 107 31 3 chr5 178084083 178084372 -25001160 - AluSx SINE Alu -15 297 1 1774 176 0 13 chr5 178084402 178084703 -25000829 + AluJo SINE Alu 1 297 -15 587 262 70 49 chr5 178084882 178085087 -25000445 - L2 LINE L2 0 3313 3099 2388 90 7 0 chr5 178085087 178085388 -25000144 + AluSq SINE Alu 1 303 -10 587 262 70 49 chr5 178085388 178085468 -25000064 - L2 LINE L2 -214 3099 3022 942 124 108 203 chr5 178086321 178086557 -24998975 - MER2 DNA MER2_type 0 344 156 2148 121 0 7 chr5 178086557 178086854 -24998678 + AluSx SINE Alu 1 295 -17 942 124 108 203 chr5 178086854 178086997 -24998535 - MER2 DNA MER2_type -188 156 1 2224 122 0 0 chr5 178087254 178087548 -24997984 - AluSg SINE Alu -16 294 1 1486 133 0 144 chr5 178087709 178088062 -24997470 - AluJo SINE Alu -10 302 1 225 242 32 0 chr5 178088420 178088482 -24997050 - Charlie7 DNA MER1_type -2 2610 2547 1958 92 0 104 chr5 178088509 178088825 -24996707 + AluSx SINE Alu 9 291 -21 1472 180 4 11 chr5 178088847 178089108 -24996424 + AluJo SINE Alu 1 259 -53 210 105 0 53 chr5 178089109 178089123 -24996409 + (GAAAA)n Simple_repeat Simple_repeat 2 15 -22 2478 75 0 0 chr5 178089123 178089429 -24996103 + AluSg1 SINE Alu 1 306 -3 210 105 0 53 chr5 178089429 178089452 -24996080 + (GAAAA)n Simple_repeat Simple_repeat 15 37 0 2007 137 0 19 chr5 178090102 178090415 -24995117 + AluJb SINE Alu 6 312 0 1062 121 0 0 chr5 178090417 178090558 -24994974 + AluSg/x SINE Alu 135 275 -37 1837 125 72 9 chr5 178090562 178090907 -24994625 + L1MB3 LINE L1 5811 6177 -6 22 56 0 0 chr5 178092182 178092218 -24993314 + AT_rich Low_complexity Low_complexity 1 36 0 260 209 22 99 chr5 178093134 178093225 -24992307 + MIR SINE MIR 103 186 -76 483 250 17 0 chr5 178094286 178094399 -24991133 + Charlie1 DNA MER1_type 2348 2462 -299 434 110 68 0 chr5 178094399 178094472 -24991060 - MADE1 DNA Mariner 0 80 3 871 167 132 23 chr5 178094474 178094731 -24990801 + Charlie1 DNA MER1_type 2461 2745 -16 895 166 0 14 chr5 178094839 178094984 -24990548 + FLAM_C SINE Alu 1 143 0 1482 199 17 3 chr5 178095255 178095546 -24989986 + AluJo SINE Alu 1 295 -17 202 303 13 13 chr5 178096160 178096236 -24989296 - MIR SINE MIR -131 131 56 32 0 0 0 chr5 178097578 178097610 -24987922 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr5 178098168 178098194 -24987338 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr5 178098552 178098576 -24986956 + AT_rich Low_complexity Low_complexity 1 24 0 243 196 278 22 chr5 178099783 178100053 -24985479 + L1ME LINE L1 5582 5920 -201 2312 113 3 0 chr5 178100086 178100395 -24985137 + AluSx SINE Alu 1 310 -2 2175 117 3 3 chr5 178101319 178101618 -24983914 + AluSx SINE Alu 1 299 -13 2426 88 0 0 chr5 178102453 178102758 -24982774 - AluY SINE Alu -6 305 1 260 209 22 99 chr5 178104189 178104280 -24981252 - MIR SINE MIR -76 186 103 22 56 0 0 chr5 178105196 178105232 -24980300 + AT_rich Low_complexity Low_complexity 1 36 0 3272 125 50 26 chr5 178106507 178106840 -24978692 - L1MB3 LINE L1 -6 6177 5823 1919 121 7 46 chr5 178106840 178107002 -24978530 - AluSx SINE Alu -19 293 147 2181 112 0 37 chr5 178107002 178107324 -24978208 - AluY SINE Alu -1 310 1 1919 121 7 46 chr5 178107324 178107466 -24978066 - AluSx SINE Alu -165 147 1 3272 125 50 26 chr5 178107466 178107716 -24977816 - L1MB3 LINE L1 -360 5823 5580 2431 82 3 10 chr5 178107723 178108029 -24977503 - AluSp SINE Alu -9 304 1 2390 84 10 0 chr5 178108641 178108939 -24976593 + AluSg SINE Alu 1 301 -9 1929 160 7 0 chr5 178109022 178109329 -24976203 - AluSq SINE Alu -4 309 1 596 184 83 0 chr5 178109366 178109475 -24976057 - FLAM_C SINE Alu -15 118 1 337 274 86 83 chr5 178109478 178109542 -24975990 - L1MC/D LINE L1 -377 5744 5682 2169 112 0 3 chr5 178109542 178109836 -24975696 + AluSx SINE Alu 1 293 -19 337 274 86 83 chr5 178109836 178110069 -24975463 - L1MC/D LINE L1 -439 5682 5446 228 257 79 30 chr5 178110644 178110745 -24974787 - LTR33 LTR ERVL 0 521 416 346 194 0 0 chr5 178110787 178110849 -24974683 - MLT1G1 LTR MaLR 0 595 534 1487 147 5 5 chr5 178110867 178111091 -24974441 - AluJo SINE Alu -88 224 1 320 351 18 0 chr5 178111105 178111219 -24974313 + L2 LINE L2 3137 3252 -20 532 122 75 19 chr5 178111611 178111718 -24973814 - L1MB7 LINE L1 -19 6165 6053 350 177 16 0 chr5 178111742 178111804 -24973728 - AluJ/FLAM SINE Alu -202 100 38 1906 148 17 126 chr5 178111805 178112077 -24973455 - L1MB7 LINE L1 -155 6029 5729 2546 69 0 0 chr5 178112077 178112380 -24973152 - AluY SINE Alu -8 303 1 1962 138 0 43 chr5 178112388 178112693 -24972839 - AluSx SINE Alu -16 296 5 1906 148 17 126 chr5 178112693 178112732 -24972800 - L1MB7 LINE L1 -462 5722 5680 1352 167 26 90 chr5 178112732 178113043 -24972489 - AluJo SINE Alu -21 291 1 1906 148 17 126 chr5 178113043 178113199 -24972333 - L1MB7 LINE L1 -504 5680 5604 597 178 0 0 chr5 178113199 178113300 -24972232 - FLAM_A SINE Alu -6 136 36 656 179 2 110 chr5 178113300 178113595 -24971937 - L1MB7 LINE L1 -570 5608 5363 1985 125 36 0 chr5 178113596 178113875 -24971657 - AluSp SINE Alu -20 293 5 2022 155 0 0 chr5 178113884 178114175 -24971357 - AluSx SINE Alu -21 291 1 285 29 0 0 chr5 178114188 178114222 -24971310 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1819 144 0 7 chr5 178114262 178114533 -24970999 - AluSx SINE Alu -13 299 31 27202 119 31 40 chr5 178114533 178120841 -24964691 + Harlequin LTR ERV1 17 5043 -130 788 133 17 127 chr5 178120835 178121182 -24964350 + Harlequin LTR ERV1 833 1141 -5755 * 6939 106 92 80 chr5 178121180 178123377 -24962155 + Harlequin LTR ERV1 36 8399 0 1099 181 5 0 chr5 178123415 178123620 -24961912 - L1MB7 LINE L1 -1098 5048 4843 272 148 0 123 chr5 178123846 178123883 -24961649 + MIR SINE MIR 124 147 -115 2385 95 3 0 chr5 178123883 178124188 -24961344 + AluSq SINE Alu 1 306 -7 272 148 0 123 chr5 178124188 178124231 -24961301 + MIR SINE MIR 147 194 -68 296 283 28 48 chr5 178124320 178124514 -24961018 + MIR SINE MIR 23 218 -44 2146 110 3 3 chr5 178125457 178125777 -24959755 + AluSp SINE Alu 2 321 0 189 0 0 0 chr5 178125782 178125803 -24959729 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 251 120 107 93 chr5 178125993 178126068 -24959464 + MIR SINE MIR 98 173 -89 2204 111 30 40 chr5 178126099 178126621 -24958911 - MER51A LTR ERV1 -18 616 3 199 171 8 219 chr5 178126623 178126746 -24958786 + MIR SINE MIR 166 262 0 2421 81 3 0 chr5 178126958 178127255 -24958277 + AluSc SINE Alu 1 298 -11 190 56 56 0 chr5 178127463 178127499 -24958033 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2222 110 3 0 chr5 178127512 178127794 -24957738 - AluSx SINE Alu -25 287 5 1127 139 0 0 chr5 178127853 178128018 -24957514 - AluJo/FRAM SINE Alu -2 310 146 372 173 0 6 chr5 178128018 178128085 -24957447 - Alu SINE Alu -247 54 1 1326 168 0 18 chr5 178128806 178129032 -24956500 + AluSx SINE Alu 14 235 -77 663 196 0 29 chr5 178129032 178129214 -24956318 + AluJb SINE Alu 149 326 0 1036 206 38 52 chr5 178129768 178130112 -24955420 - L1MC5 LINE L1 -37 7924 7586 2412 56 0 17 chr5 178130127 178130442 -24955090 + AluSp SINE Alu 2 311 0 1269 98 12 0 chr5 178130447 178130610 -24954922 + AluSp SINE Alu 134 298 -15 1898 187 29 155 chr5 178130612 178130715 -24954817 - L1MC5 LINE L1 -383 7578 7464 2041 141 10 16 chr5 178130715 178131027 -24954505 - AluSx SINE Alu -2 310 1 1898 187 29 155 chr5 178131027 178131211 -24954321 - L1MC5 LINE L1 -497 7464 7258 186 43 0 0 chr5 178131211 178131234 -24954298 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2048 123 4 0 chr5 178131235 178131512 -24954020 - AluSg SINE Alu -32 278 1 1898 187 29 155 chr5 178131512 178131550 -24953982 - L1MC5 LINE L1 -703 7258 7217 2417 155 8 3 chr5 178131550 178131938 -24953594 + MLT1B LTR MaLR 1 390 0 1898 187 29 155 chr5 178131938 178132095 -24953437 - L1MC5 LINE L1 -744 7217 7042 1835 167 3 3 chr5 178132095 178132383 -24953149 - AluSx SINE Alu -24 288 1 1898 187 29 155 chr5 178132383 178132750 -24952782 - L1MC5 LINE L1 -919 7042 6630 2200 73 7 0 chr5 178132750 178133022 -24952510 + AluSp SINE Alu 1 274 -39 246 32 0 0 chr5 178133022 178133053 -24952479 + (TC)n Simple_repeat Simple_repeat 1 31 0 288 0 0 0 chr5 178133054 178133086 -24952446 + (TA)n Simple_repeat Simple_repeat 2 33 0 1898 187 29 155 chr5 178133086 178133164 -24952368 - L1MC5 LINE L1 -1330 6631 6748 1973 131 16 42 chr5 178133164 178133343 -24952189 - AluSx SINE Alu -8 304 135 2122 112 0 50 chr5 178133343 178133665 -24951867 - AluSx SINE Alu -6 306 1 1973 131 16 42 chr5 178133665 178133797 -24951735 - AluSx SINE Alu -177 135 1 1898 187 29 155 chr5 178133797 178134051 -24951481 - L1MC5 LINE L1 -1212 6749 6465 1619 194 0 0 chr5 178134058 178134331 -24951201 + AluJo SINE Alu 1 273 -39 221 300 25 0 chr5 178134743 178134823 -24950709 + (TA)n Simple_repeat Simple_repeat 2 83 0 2185 129 3 0 chr5 178134824 178135119 -24950413 - AluSq SINE Alu -17 296 1 973 269 141 52 chr5 178135135 178135410 -24950122 - L1MC5 LINE L1 -1888 5920 5671 1358 119 109 144 chr5 178135410 178135722 -24949810 - AluSx SINE Alu 0 302 2 973 269 141 52 chr5 178135722 178136044 -24949488 - L1MC5 LINE L1 -2137 5671 5270 2040 139 3 0 chr5 178136446 178136740 -24948792 - AluSg SINE Alu -15 295 1 533 324 54 41 chr5 178137062 178137451 -24948081 + L2 LINE L2 2920 3313 0 610 144 6 156 chr5 178137464 178137624 -24947908 + AluJo SINE Alu 1 136 -176 413 361 18 0 chr5 178137782 178137951 -24947581 + MIR3 SINE MIR 30 201 -7 1735 162 13 26 chr5 178139154 178139456 -24946076 - AluJb SINE Alu -5 307 10 2114 120 19 10 chr5 178139503 178139812 -24945720 + AluSq SINE Alu 1 312 -1 1506 39 0 0 chr5 178139825 178140003 -24945529 + L1PA8 LINE L1 5993 6170 -2 2198 122 0 6 chr5 178140255 178140566 -24944966 + AluSg SINE Alu 1 309 -1 1804 176 3 3 chr5 178140628 178140923 -24944609 + AluJo SINE Alu 1 295 -17 759 157 0 9 chr5 178140953 178141068 -24944464 - FLAM_C SINE Alu -25 118 5 23 33 0 0 chr5 178141078 178141108 -24944424 + AT_rich Low_complexity Low_complexity 1 30 0 676 221 11 114 chr5 178141197 178141337 -24944195 + MIR SINE MIR 28 181 -81 2195 103 13 0 chr5 178141337 178141637 -24943895 + AluSp SINE Alu 1 304 -9 676 221 11 114 chr5 178141637 178141693 -24943839 + MIR SINE MIR 181 193 -69 2011 133 17 3 chr5 178141693 178141986 -24943546 + AluSx SINE Alu 1 297 -15 676 221 11 114 chr5 178141986 178142050 -24943482 + MIR SINE MIR 193 262 0 2340 88 7 0 chr5 178142115 178142410 -24943122 + AluY SINE Alu 1 297 -14 956 144 16 37 chr5 178142646 178142833 -24942699 - MER5A DNA MER1_type -6 183 1 274 265 0 0 chr5 178142943 178143011 -24942521 - L2 LINE L2 -1 3271 3204 872 139 0 0 chr5 178143028 178143157 -24942375 + FLAM_C SINE Alu 1 129 -4 24 0 0 0 chr5 178143325 178143349 -24942183 + AT_rich Low_complexity Low_complexity 1 24 0 195 337 81 47 chr5 178143379 178143551 -24941981 - MIR SINE MIR -65 197 20 226 359 24 29 chr5 178143934 178144140 -24941392 - L2 LINE L2 -178 3094 2890 1177 136 6 0 chr5 178144308 178144477 -24941055 - AluSp SINE Alu -18 295 126 1194 75 0 7 chr5 178144505 178144651 -24940881 - AluSq/x SINE Alu -162 151 7 475 300 72 0 chr5 178144653 178144833 -24940699 + MIR SINE MIR 38 230 -32 1123 157 0 81 chr5 178144972 178145208 -24940324 + AluJb SINE Alu 87 303 -9 2190 98 13 25 chr5 178145315 178145631 -24939901 - AluSx SINE Alu 0 312 1 2153 103 13 20 chr5 178145837 178146138 -24939394 - AluSc SINE Alu -10 299 1 1863 152 18 0 chr5 178146142 178146425 -24939107 - AluSx SINE Alu -24 288 1 385 338 85 37 chr5 178146818 178147090 -24938442 + L2 LINE L2 2368 2652 -662 2092 132 0 0 chr5 178147211 178147506 -24938026 + AluSx SINE Alu 1 295 -17 350 240 171 23 chr5 178147606 178147735 -24937797 + L2 LINE L2 2929 3076 -196 1927 132 14 10 chr5 178147808 178148096 -24937436 + AluJb SINE Alu 6 294 -18 1710 107 35 104 chr5 178148202 178148519 -24937013 + AluSx SINE Alu 1 295 -17 2993 209 49 18 chr5 178149028 178149639 -24935893 - MER82 DNA MER2_type -1 652 23 997 170 69 0 chr5 178150342 178150530 -24935002 - MIR SINE MIR -31 231 31 245 287 221 31 chr5 178150780 178151069 -24934463 + L2 LINE L2 2853 3196 -117 1284 164 118 0 chr5 178151284 178151522 -24934010 + AluJo SINE Alu 23 288 -24 234 62 0 0 chr5 178151554 178151586 -24933946 + (CA)n Simple_repeat Simple_repeat 2 33 0 2284 78 0 0 chr5 178151786 178152067 -24933465 - AluSc SINE Alu -8 301 21 2286 110 0 7 chr5 178152260 178152568 -24932964 - AluSx SINE Alu -6 306 1 1879 161 20 7 chr5 178153100 178153405 -24932127 + AluJb SINE Alu 3 311 -1 2034 125 13 13 chr5 178153464 178153776 -24931756 + AluSx SINE Alu 1 312 0 306 0 0 0 chr5 178153866 178153900 -24931632 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 527 194 28 56 chr5 178153932 178154076 -24931456 + L1MC4 LINE L1 6789 6928 -1114 1537 139 125 11 chr5 178154076 178154356 -24931176 + AluSx SINE Alu 1 312 0 563 222 68 18 chr5 178154399 178154720 -24930812 + L1MC4 LINE L1 7535 7914 -128 288 248 51 8 chr5 178154767 178154884 -24930648 + L1MC4 LINE L1 7921 8042 0 2100 112 0 3 chr5 178154897 178155182 -24930350 + AluY SINE Alu 6 289 -22 27 0 0 0 chr5 178156904 178156931 -24928601 + AT_rich Low_complexity Low_complexity 1 27 0 805 244 56 28 chr5 178157973 178158260 -24927272 + L1MC4 LINE L1 7629 7923 -119 1563 168 18 11 chr5 178158372 178158657 -24926875 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr5 178158666 178158686 -24926846 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 210 71 0 0 chr5 178159506 178159534 -24925998 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 36 0 0 chr5 178159908 178159936 -24925596 + AT_rich Low_complexity Low_complexity 1 28 0 2081 137 7 0 chr5 178160004 178160310 -24925222 - AluSq SINE Alu -3 310 3 308 279 233 0 chr5 178161286 178161415 -24924117 + L1ME LINE L1 5320 5478 -2330 257 290 71 6 chr5 178161440 178161609 -24923923 + L1ME LINE L1 5725 5904 -217 1472 164 101 11 chr5 178162323 178162609 -24922923 - MER7A DNA MER2_type -1 345 36 32 0 0 0 chr5 178163113 178163145 -24922387 + AT_rich Low_complexity Low_complexity 1 32 0 2204 130 0 0 chr5 178163851 178164158 -24921374 + AluSx SINE Alu 1 307 -5 2152 91 0 14 chr5 178164856 178165153 -24920379 + AluY SINE Alu 3 295 -16 2458 72 0 3 chr5 178165180 178165486 -24920046 + AluY SINE Alu 1 305 -6 366 226 63 109 chr5 178165756 178165977 -24919555 - MER34 LTR ERV1 0 542 347 342 96 41 0 chr5 178166108 178166181 -24919351 + (TA)n Simple_repeat Simple_repeat 2 77 0 768 131 0 0 chr5 178166216 178166323 -24919209 - FLAM_C SINE Alu -36 107 1 246 252 32 81 chr5 178166540 178166663 -24918869 - MER34B LTR ERV1 -448 117 1 701 256 33 42 chr5 178166722 178166947 -24918585 + MIR SINE MIR 3 226 -36 733 278 132 52 chr5 178167035 178167496 -24918036 - L2 LINE L2 -1 3312 2815 372 262 115 47 chr5 178167503 178167940 -24917592 + LTR33 LTR ERVL 17 521 0 181 288 0 0 chr5 178168038 178168097 -24917435 + L2 LINE L2 1712 1770 -1544 284 309 158 12 chr5 178168145 178168310 -24917222 + L2 LINE L2 1974 2162 -1152 2036 143 7 0 chr5 178168387 178168680 -24916852 - AluSx SINE Alu -15 297 3 229 261 126 36 chr5 178168690 178168801 -24916731 + L2 LINE L2 2696 2816 -498 843 122 79 0 chr5 178168907 178169043 -24916489 - MER44D DNA MER2_type 0 705 559 2420 103 16 43 chr5 178169043 178169349 -24916183 + THE1B LTR MaLR 1 297 -67 1893 157 0 0 chr5 178169349 178169636 -24915896 + AluSx SINE Alu 2 288 -24 2420 103 16 43 chr5 178169636 178169697 -24915835 + THE1B LTR MaLR 297 358 -6 2267 121 3 0 chr5 178169698 178170005 -24915527 + AluSp SINE Alu 1 308 -5 3097 125 14 103 chr5 178170014 178170060 -24915472 - MER44D DNA MER2_type -2020 567 519 1777 164 0 14 chr5 178170060 178170352 -24915180 + AluJb SINE Alu 1 288 -24 3097 125 14 103 chr5 178170352 178170445 -24915087 - MER44D DNA MER2_type -2068 519 419 809 143 8 0 chr5 178170445 178170571 -24914961 + FLAM_C SINE Alu 1 127 -6 3097 125 14 103 chr5 178170571 178171052 -24914480 - MER44D DNA MER2_type -2168 419 1 1197 198 20 4 chr5 178171718 178171970 -24913562 + L1ME2 LINE L1 5604 5859 -305 1931 118 51 7 chr5 178171991 178172287 -24913245 + AluSx SINE Alu 1 309 -3 1301 99 11 0 chr5 178172294 178172476 -24913056 + AluSq SINE Alu 118 301 -12 270 233 105 0 chr5 178172477 178172563 -24912969 + L1ME2 LINE L1 5873 5967 -197 2242 118 0 3 chr5 178172627 178172931 -24912601 + AluSx SINE Alu 1 303 -9 665 242 0 0 chr5 178172936 178173056 -24912476 + FLAM_A SINE Alu 1 120 -13 405 231 0 54 chr5 178173261 178173408 -24912124 - L1MC4a LINE L1 -1933 5875 5737 1704 98 8 0 chr5 178173422 178173658 -24911874 - AluSg/x SINE Alu 0 310 73 2122 114 0 3 chr5 178173826 178174116 -24911416 + AluY SINE Alu 1 289 -22 27 0 0 0 chr5 178175838 178175865 -24909667 + AT_rich Low_complexity Low_complexity 1 27 0 805 244 56 28 chr5 178176907 178177194 -24908338 + L1MC4 LINE L1 7629 7923 -119 1563 168 18 11 chr5 178177306 178177591 -24907941 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr5 178177600 178177620 -24907912 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 210 71 0 0 chr5 178178440 178178468 -24907064 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 36 0 0 chr5 178178842 178178870 -24906662 + AT_rich Low_complexity Low_complexity 1 28 0 2081 137 7 0 chr5 178178938 178179244 -24906288 - AluSq SINE Alu -3 310 3 308 279 233 0 chr5 178180220 178180349 -24905183 + L1ME LINE L1 5320 5478 -2330 257 290 71 6 chr5 178180374 178180543 -24904989 + L1ME LINE L1 5725 5904 -217 1472 164 101 11 chr5 178181257 178181543 -24903989 - MER7A DNA MER2_type -1 345 36 32 0 0 0 chr5 178182047 178182079 -24903453 + AT_rich Low_complexity Low_complexity 1 32 0 2245 112 3 0 chr5 178182785 178183090 -24902442 + AluSq SINE Alu 1 306 -7 1582 108 0 0 chr5 178183111 178183315 -24902217 + AluSq SINE Alu 1 204 -109 2152 122 0 3 chr5 178183458 178183754 -24901778 - AluSx SINE Alu -17 295 1 2325 86 0 7 chr5 178184106 178184407 -24901125 - AluSq SINE Alu -14 299 1 250 247 253 45 chr5 178184467 178184621 -24900911 + L2 LINE L2 3128 3313 0 189 0 0 0 chr5 178185599 178185620 -24899912 + (A)n Simple_repeat Simple_repeat 1 21 0 2440 74 0 13 chr5 178186205 178186516 -24899016 + AluSp SINE Alu 2 308 -5 357 62 0 0 chr5 178188525 178188573 -24896959 + (GA)n Simple_repeat Simple_repeat 1 48 0 24 32 0 0 chr5 178188795 178188826 -24896706 + AT_rich Low_complexity Low_complexity 1 31 0 244 233 0 41 chr5 178189306 178189379 -24896153 + A-rich Low_complexity Low_complexity 5 74 0 208 320 77 13 chr5 178189431 178189509 -24896023 - MIR SINE MIR -68 140 58 186 325 32 41 chr5 178189984 178190107 -24895425 + MIR SINE MIR 70 191 -71 573 209 0 0 chr5 178190659 178190764 -24894768 + U6 snRNA snRNA 1 105 -2 1329 159 88 20 chr5 178190766 178191061 -24894471 + L1MC2 LINE L1 6019 6333 -11 2080 110 40 0 chr5 178192821 178193121 -24892411 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 178194009 178194032 -24891500 + AT_rich Low_complexity Low_complexity 1 23 0 2045 127 7 7 chr5 178196310 178196609 -24888923 + AluSx SINE Alu 1 299 -13 303 28 0 0 chr5 178196675 178196711 -24888821 + (CA)n Simple_repeat Simple_repeat 1 36 0 939 189 13 0 chr5 178196713 178196872 -24888660 + AluJb SINE Alu 135 295 -17 596 207 25 0 chr5 178196921 178197042 -24888490 + L1MB7 LINE L1 6006 6129 -55 1818 179 29 9 chr5 178197185 178197525 -24888007 - MER7A DNA MER2_type 0 346 2 22 56 0 0 chr5 178198483 178198519 -24887013 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 178198609 178198639 -24886893 + AT_rich Low_complexity Low_complexity 1 30 0 264 191 95 0 chr5 178199633 178199717 -24885815 - L1ME LINE L1 -236 5885 5794 471 271 205 14 chr5 178199763 178199973 -24885559 + MIR SINE MIR 13 262 0 1094 177 0 69 chr5 178199995 178200227 -24885305 + AluJo SINE Alu 84 299 -13 1351 186 0 4 chr5 178201727 178201958 -24883574 + AluJb SINE Alu 1 230 -82 23 0 0 0 chr5 178202294 178202317 -24883215 + AT_rich Low_complexity Low_complexity 1 23 0 2299 93 16 49 chr5 178203609 178203776 -24881756 + THE1A LTR MaLR 1 172 -183 898 76 114 0 chr5 178203776 178203908 -24881624 - L1PA5 LINE L1 0 6154 6008 2299 93 16 49 chr5 178203908 178204107 -24881425 + THE1A LTR MaLR 172 355 0 2053 130 76 13 chr5 178205327 178205643 -24879889 + MER1B DNA MER1_type 2 337 0 190 361 103 21 chr5 178206304 178206401 -24879131 - MIR SINE MIR -157 105 1 21 0 0 0 chr5 178207275 178207296 -24878236 + AT_rich Low_complexity Low_complexity 1 21 0 336 321 139 5 chr5 178209464 178209651 -24875881 + MIR SINE MIR 3 214 -48 31 0 0 0 chr5 178210160 178210191 -24875341 + AT_rich Low_complexity Low_complexity 1 31 0 1965 126 0 43 chr5 178210371 178210703 -24874829 + AluSx SINE Alu 1 312 0 321 254 82 30 chr5 178210993 178211096 -24874436 + MER103 DNA DNA 17 130 -36 1658 135 6 74 chr5 178211096 178211407 -24874125 - AluJb SINE Alu -22 290 1 321 254 82 30 chr5 178211407 178211437 -24874095 + MER103 DNA DNA 130 157 -9 1991 152 3 0 chr5 178211515 178211812 -24873720 - AluJb SINE Alu -14 298 1 810 148 0 0 chr5 178212163 178212278 -24873254 + FLAM_C SINE Alu 6 120 -23 459 130 0 0 chr5 178212284 178212361 -24873171 + (TC)n Simple_repeat Simple_repeat 1 77 0 180 0 0 0 chr5 178212361 178212381 -24873151 + (TA)n Simple_repeat Simple_repeat 1 20 0 1137 155 0 80 chr5 178212393 178212632 -24872900 + AluJb SINE Alu 87 306 -6 2172 98 13 25 chr5 178212736 178213052 -24872480 - AluSx SINE Alu 0 312 1 2143 103 13 20 chr5 178213258 178213560 -24871972 - AluSc SINE Alu -9 300 1 1844 152 18 0 chr5 178213564 178213847 -24871685 - AluSx SINE Alu -24 288 1 445 347 87 35 chr5 178214240 178214528 -24871004 + L2 LINE L2 2368 2670 -644 2070 132 0 0 chr5 178214633 178214928 -24870604 + AluSx SINE Alu 1 295 -17 393 240 171 23 chr5 178215028 178215157 -24870375 + L2 LINE L2 2929 3076 -196 1902 132 14 10 chr5 178215230 178215518 -24870014 + AluJb SINE Alu 6 294 -18 1687 107 35 104 chr5 178215624 178215941 -24869591 + AluSx SINE Alu 1 295 -17 3012 209 49 18 chr5 178216450 178217061 -24868471 - MER82 DNA MER2_type -1 652 23 1000 170 69 0 chr5 178217764 178217952 -24867580 - MIR SINE MIR -31 231 31 242 288 152 67 chr5 178218014 178218491 -24867041 + L2 LINE L2 2644 3196 -117 1280 164 118 0 chr5 178218706 178218944 -24866588 + AluJo SINE Alu 23 288 -24 267 31 0 0 chr5 178218976 178219008 -24866524 + (CA)n Simple_repeat Simple_repeat 2 33 0 2273 79 0 0 chr5 178219208 178219486 -24866046 - AluSc SINE Alu -11 298 21 2306 110 0 7 chr5 178219679 178219987 -24865545 - AluSx SINE Alu -6 306 1 1887 163 19 7 chr5 178220517 178220824 -24864708 + AluJb SINE Alu 1 311 -1 2045 131 13 13 chr5 178220883 178221195 -24864337 + AluSx SINE Alu 1 312 0 414 0 0 0 chr5 178221285 178221331 -24864201 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 540 194 28 56 chr5 178221363 178221507 -24864025 + L1MC4 LINE L1 6789 6928 -1114 1534 143 125 11 chr5 178221507 178221786 -24863746 + AluSx SINE Alu 1 311 -1 922 204 144 97 chr5 178221826 178222311 -24863221 + L1MC4 LINE L1 7535 8042 0 828 149 0 52 chr5 178222324 178222458 -24863074 + FLAM_C SINE Alu 6 132 -11 1596 190 3 20 chr5 178222544 178222849 -24862683 + AluJb SINE Alu 1 300 -12 2225 112 3 3 chr5 178222849 178223152 -24862380 + AluSx SINE Alu 1 303 -9 1498 176 13 49 chr5 178223189 178223496 -24862036 - AluJb SINE Alu -16 296 1 748 106 10 0 chr5 178223909 178224013 -24861519 + AluY SINE Alu 172 276 -35 24 0 0 0 chr5 178224723 178224747 -24860785 + AT_rich Low_complexity Low_complexity 1 24 0 2267 102 0 0 chr5 178226635 178226948 -24858584 + AluSx SINE Alu 3 315 0 13433 121 74 35 chr5 178227034 178227120 -24858412 + Tigger1 DNA MER2_type 3 84 -2334 2584 40 0 10 chr5 178227120 178227420 -24858112 - AluY SINE Alu -14 297 1 13433 121 74 35 chr5 178227420 178228791 -24856741 + Tigger1 DNA MER2_type 84 1401 -1017 1920 130 13 27 chr5 178228791 178229091 -24856441 + AluSx SINE Alu 1 296 -16 13433 121 74 35 chr5 178229091 178229380 -24856152 + Tigger1 DNA MER2_type 1401 1677 -741 1784 171 24 0 chr5 178229380 178229672 -24855860 - AluJb SINE Alu -13 299 1 1880 138 28 0 chr5 178229680 178229963 -24855569 - AluSx SINE Alu -21 291 1 13433 121 74 35 chr5 178229963 178230075 -24855457 + Tigger1 DNA MER2_type 1683 1789 -629 2031 122 3 30 chr5 178230075 178230241 -24855291 - AluSx SINE Alu -17 295 139 2117 129 0 0 chr5 178230241 178230528 -24855004 - AluSx SINE Alu -25 287 1 2031 122 3 30 chr5 178230528 178230664 -24854868 - AluSx SINE Alu -173 139 1 13433 121 74 35 chr5 178230664 178231119 -24854413 + Tigger1 DNA MER2_type 1789 2418 0 235 319 55 8 chr5 178231159 178231353 -24854179 + MIR SINE MIR 7 262 0 582 177 69 15 chr5 178231413 178231543 -24853989 - L2 LINE L2 0 3313 3177 405 251 231 26 chr5 178231609 178231804 -24853728 - L2 LINE L2 -421 2893 2659 1827 145 33 16 chr5 178231902 178232206 -24853326 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr5 178232349 178232371 -24853161 + AT_rich Low_complexity Low_complexity 1 22 0 1827 157 17 7 chr5 178232371 178232658 -24852874 - AluJo SINE Alu -22 290 1 180 0 0 0 chr5 178232705 178232725 -24852807 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 178232873 178232901 -24852631 + AT_rich Low_complexity Low_complexity 1 28 0 1574 182 36 30 chr5 178232973 178233275 -24852257 + AluJb SINE Alu 1 304 -8 198 282 259 23 chr5 178234114 178234288 -24851244 - MIR SINE MIR 0 262 48 1930 137 30 13 chr5 178234632 178234932 -24850600 + AluSx SINE Alu 1 305 -7 2411 96 0 3 chr5 178235061 178235374 -24850158 + AluSx SINE Alu 1 312 0 468 189 12 14 chr5 178235868 178236122 -24849410 + AluJo SINE Alu 1 304 -8 1944 147 14 0 chr5 178236428 178236721 -24848811 + AluSq SINE Alu 1 297 -16 1855 132 0 0 chr5 178237253 178237518 -24848014 + AluSq SINE Alu 35 299 -14 308 272 54 83 chr5 178237841 178237992 -24847540 - MIR3 SINE MIR -21 187 35 791 169 141 0 chr5 178238667 178238809 -24846723 + FRAM SINE Alu 1 162 -4 501 219 34 68 chr5 178239137 178239283 -24846249 - MIR SINE MIR -43 219 79 712 153 8 8 chr5 178240882 178241000 -24844532 + MER5A DNA MER1_type 72 189 0 281 210 130 20 chr5 178241139 178241239 -24844293 + MIR3 SINE MIR 97 207 -1 224 146 0 0 chr5 178241533 178241574 -24843958 - L2 LINE L2 -5 3308 3268 1834 157 68 47 chr5 178241674 178242056 -24843476 - LTR8A LTR ERV1 0 727 338 915 169 0 121 chr5 178242064 178242295 -24843237 + AluJo SINE Alu 1 203 -109 791 146 0 8 chr5 178242430 178242553 -24842979 - FLAM_A SINE Alu 0 142 21 1935 80 4 0 chr5 178243477 178243715 -24841817 + AluSp SINE Alu 1 239 -74 1297 279 48 45 chr5 178243877 178244340 -24841192 + LTR16B LTR ERVL 1 464 0 2414 93 0 3 chr5 178244436 178244746 -24840786 - AluSx SINE Alu -3 309 1 1127 68 0 0 chr5 178244753 178244886 -24840646 - AluSq/x SINE Alu -180 133 1 237 310 40 50 chr5 178244917 178245017 -24840515 - MLT1K LTR MaLR -290 298 200 2259 121 0 0 chr5 178245322 178245628 -24839904 + AluSx SINE Alu 1 306 -6 2299 58 6 38 chr5 178246326 178246639 -24838893 + AluY SINE Alu 3 305 -6 1568 162 68 4 chr5 178246654 178246932 -24838600 + AluJb SINE Alu 1 296 -16 2456 75 0 3 chr5 178246959 178247265 -24838267 + AluY SINE Alu 1 305 -6 395 226 63 109 chr5 178247535 178247756 -24837776 - MER34 LTR ERV1 0 542 347 279 106 45 0 chr5 178247887 178247953 -24837579 + (TA)n Simple_repeat Simple_repeat 1 69 0 833 124 0 110 chr5 178247953 178248098 -24837434 - FLAM_C SINE Alu -14 129 1 258 252 32 81 chr5 178248315 178248438 -24837094 - MER34B LTR ERV1 -448 117 1 715 277 44 5 chr5 178248516 178248722 -24836810 + MIR SINE MIR 13 226 -36 718 283 136 45 chr5 178248822 178249271 -24836261 - L2 LINE L2 -9 3304 2815 396 287 90 19 chr5 178249278 178249715 -24835817 + LTR33 LTR ERVL 17 521 0 191 288 0 0 chr5 178249813 178249872 -24835660 + L2 LINE L2 1712 1770 -1544 288 309 158 12 chr5 178249920 178250085 -24835447 + L2 LINE L2 1974 2162 -1152 2011 140 10 0 chr5 178250162 178250454 -24835078 - AluSx SINE Alu -15 297 3 261 297 14 0 chr5 178250464 178250538 -24834994 + L2 LINE L2 2696 2770 -544 865 122 79 0 chr5 178250680 178250816 -24834716 - Tigger7 DNA MER2_type 0 2491 2345 2445 106 16 43 chr5 178250816 178251122 -24834410 + THE1B LTR MaLR 1 297 -67 1876 160 0 0 chr5 178251122 178251409 -24834123 + AluSx SINE Alu 2 288 -24 2445 106 16 43 chr5 178251409 178251470 -24834062 + THE1B LTR MaLR 297 358 -6 2268 124 3 0 chr5 178251471 178251778 -24833754 + AluSp SINE Alu 1 308 -5 599 77 43 60 chr5 178251787 178251820 -24833712 - Tigger7 DNA MER2_type -138 2353 2321 307 146 0 0 chr5 178251820 178251833 -24833699 + AluSp SINE Alu 123 135 -168 1677 169 0 22 chr5 178251833 178252147 -24833385 + AluJb SINE Alu 1 307 -5 599 77 43 60 chr5 178251868 178252217 -24833315 - Tigger7 DNA MER2_type -170 2321 2239 828 141 7 15 chr5 178252219 178252354 -24833178 + FLAM_C SINE Alu 2 135 -8 2755 151 19 32 chr5 178252354 178252825 -24832707 - MER44D DNA MER2_type -240 465 1 1213 198 20 4 chr5 178253491 178253743 -24831789 + L1ME3A LINE L1 5604 5859 -305 1845 120 50 7 chr5 178253764 178254063 -24831469 + AluSx SINE Alu 1 312 0 1257 98 11 0 chr5 178254067 178254250 -24831282 + AluSq SINE Alu 118 302 -11 282 207 119 0 chr5 178254251 178254337 -24831195 + L1ME3A LINE L1 5873 5967 -197 2152 118 0 3 chr5 178254402 178254706 -24830826 + AluSx SINE Alu 1 303 -9 698 242 0 0 chr5 178254711 178254843 -24830689 + FLAM_A SINE Alu 1 132 -1 313 192 0 0 chr5 178256236 178256288 -24829244 + L1MC4 LINE L1 6652 6703 -1339 * 382 329 0 0 chr5 178256267 178256412 -24829120 - L1MC4 LINE L1 -1339 6703 6614 2308 76 3 0 chr5 178256425 178256716 -24828816 - AluSp SINE Alu -19 294 3 1919 121 18 0 chr5 178256727 178257009 -24828523 - AluSq SINE Alu -26 287 1 579 216 73 48 chr5 178257097 178257326 -24828206 - LTR45B LTR ERV1 0 518 302 1058 160 0 16 chr5 178257893 178258081 -24827451 + AluJb SINE Alu 127 311 -1 997 210 74 86 chr5 178258083 178258407 -24827125 - MSTD LTR MaLR -76 320 1 1696 131 0 8 chr5 178258439 178258698 -24826834 + AluSx SINE Alu 11 267 -45 1096 140 6 0 chr5 178259071 178259250 -24826282 - AluSx SINE Alu -12 298 119 1021 96 0 0 chr5 178259702 178259837 -24825695 - AluSx SINE Alu -177 135 1 2228 97 0 3 chr5 178259846 178260155 -24825377 - AluSg SINE Alu -1 309 2 1457 173 24 41 chr5 178260423 178260718 -24824814 - AluJo SINE Alu -22 290 1 297 316 43 36 chr5 178261133 178261272 -24824260 + MIR3 SINE MIR 20 159 -49 386 319 38 12 chr5 178261274 178261434 -24824098 + MER117 DNA MER1_type 1 164 -33 454 258 85 73 chr5 178261799 178261966 -24823566 + L1ME LINE L1 5124 5288 -918 2161 94 3 0 chr5 178261966 178262280 -24823252 + AluSp SINE Alu 1 315 0 454 258 85 73 chr5 178262280 178262439 -24823093 + L1ME LINE L1 5288 5463 -743 247 299 54 34 chr5 178262529 178262609 -24822923 + L1ME LINE L1 5542 5628 -493 3012 184 35 70 chr5 178262609 178263325 -24822207 - LTR8 LTR ERV1 0 691 1 247 299 54 34 chr5 178263325 178263391 -24822141 + L1ME LINE L1 5628 5691 -430 1445 136 115 57 chr5 178264234 178264513 -24821019 + AluSx SINE Alu 1 295 -17 2319 71 7 0 chr5 178264529 178264823 -24820709 - AluY SINE Alu -15 296 1 294 339 78 51 chr5 178264888 178265336 -24820196 + L2 LINE L2 2767 3221 -51 358 279 199 37 chr5 178266098 178266259 -24819273 + L2 LINE L2 3082 3268 -4 874 245 120 84 chr5 178266391 178266784 -24818748 - MLT1G LTR MaLR -1 589 211 2055 124 0 3 chr5 178266784 178267083 -24818449 - AluSx SINE Alu -14 298 1 1759 164 38 0 chr5 178267084 178267376 -24818156 - AluJb SINE Alu -9 303 1 874 245 120 84 chr5 178267376 178267540 -24817992 - MLT1G LTR MaLR -378 212 10 181 302 23 0 chr5 178267606 178267649 -24817883 - L2 LINE L2 -531 2783 2740 588 38 13 13 chr5 178267660 178267739 -24817793 + MADE1 DNA Mariner 1 79 -1 606 219 12 61 chr5 178268022 178268186 -24817346 + MLT2E LTR ERVL 469 624 -4 2209 100 3 0 chr5 178268199 178268510 -24817022 + AluSx SINE Alu 1 312 0 1845 152 27 28 chr5 178268654 178268691 -24816841 - MER4D LTR ERV1 -539 313 277 2005 95 11 7 chr5 178268691 178268975 -24816557 + AluSx SINE Alu 1 285 -27 180 0 0 0 chr5 178268975 178268995 -24816537 + (TA)n Simple_repeat Simple_repeat 2 21 0 1845 152 27 28 chr5 178268995 178269307 -24816225 - MER4D LTR ERV1 -573 279 1 482 245 0 0 chr5 178269307 178269402 -24816130 - MER58A DNA MER1_type -8 99 5 4052 115 48 7 chr5 178269888 178270506 -24815026 + LTR9B LTR ERV1 1 644 0 6340 55 8 14 chr5 178270980 178271765 -24813767 + LTR17 LTR ERV1 1 780 0 2024 131 3 0 chr5 178271927 178272224 -24813308 + AluSx SINE Alu 9 306 -6 1317 107 0 0 chr5 178272508 178272720 -24812812 - AluSg SINE Alu 0 320 109 2076 99 35 8 chr5 178272720 178273109 -24812423 + LTR7 LTR ERV1 1 450 0 767 99 0 18 chr5 178273109 178273220 -24812312 - AluSg SINE Alu -199 111 3 1704 183 7 0 chr5 178273317 178273617 -24811915 + AluJb SINE Alu 9 310 -2 339 325 74 12 chr5 178273800 178273963 -24811569 + MIR SINE MIR 2 174 -88 712 246 34 75 chr5 178273968 178274034 -24811498 + MIR SINE MIR 3 70 -192 2200 90 3 0 chr5 178274034 178274322 -24811210 - AluSg SINE Alu -21 289 1 712 246 34 75 chr5 178274322 178274446 -24811086 + MIR SINE MIR 70 181 -81 2114 119 0 16 chr5 178274446 178274756 -24810776 - AluSx SINE Alu -7 305 1 712 246 34 75 chr5 178274756 178274832 -24810700 + MIR SINE MIR 181 259 -3 2323 42 3 0 chr5 178275074 178275396 -24810136 + AluY SINE Alu 1 311 0 1069 275 148 13 chr5 178275403 178275857 -24809675 - MLT1G1 LTR MaLR 0 595 81 1266 169 156 43 chr5 178275901 178276227 -24809305 - MLT1F LTR MaLR 0 542 180 268 220 27 107 chr5 178276262 178276412 -24809120 - MLT1F LTR MaLR -341 201 64 1224 128 0 5 chr5 178276530 178276718 -24808814 + AluSg/x SINE Alu 123 309 -3 2205 105 0 3 chr5 178276920 178277224 -24808308 - AluSp SINE Alu -10 303 1 260 333 11 11 chr5 178277344 178277437 -24808095 - L2 LINE L2 -204 3068 2976 901 202 0 0 chr5 178278605 178278773 -24806759 + FRAM SINE Alu 1 168 -8 365 175 0 12 chr5 178278779 178278859 -24806673 + GA-rich Low_complexity Low_complexity 3 81 0 323 310 163 16 chr5 178279130 178279314 -24806218 - MIR SINE MIR -49 213 3 3976 131 21 81 chr5 178279316 178279411 -24806121 + MER39 LTR ERV1 1 100 -607 1434 97 0 0 chr5 178279411 178279596 -24805936 - U2 snRNA snRNA -3 185 1 3976 131 21 81 chr5 178279596 178280074 -24805458 + MER39 LTR ERV1 100 521 -186 2283 100 3 0 chr5 178280074 178280385 -24805147 + AluSq SINE Alu 2 313 0 3976 131 21 81 chr5 178280385 178280561 -24804971 + MER39 LTR ERV1 521 706 -1 243 0 0 0 chr5 178281160 178281187 -24804345 + (TC)n Simple_repeat Simple_repeat 2 28 0 222 171 0 0 chr5 178281187 178281228 -24804304 + (TATG)n Simple_repeat Simple_repeat 3 43 0 2256 79 3 0 chr5 178281228 178281520 -24804012 - AluY SINE Alu -17 294 2 887 185 12 12 chr5 178281523 178281696 -24803836 - FRAM SINE Alu -3 173 1 194 62 31 0 chr5 178282018 178282050 -24803482 + (TTA)n Simple_repeat Simple_repeat 1 33 0 722 188 8 0 chr5 178282050 178282167 -24803365 - FLAM_C SINE Alu -24 119 2 1791 151 0 17 chr5 178282430 178282728 -24802804 + AluSx SINE Alu 11 303 -9 309 265 50 49 chr5 178282811 178282933 -24802599 + MLT1H1 LTR MaLR 338 471 -96 2067 117 7 0 chr5 178282933 178283224 -24802308 + AluSq SINE Alu 1 293 -20 309 265 50 49 chr5 178283224 178283319 -24802213 + MLT1H1 LTR MaLR 471 564 -3 563 259 127 0 chr5 178283368 178283565 -24801967 + MER58A DNA MER1_type 2 223 -1 240 35 0 0 chr5 178283602 178283631 -24801901 + (T)n Simple_repeat Simple_repeat 1 29 0 487 178 0 0 chr5 178283641 178283714 -24801818 - AluJ/FLAM SINE Alu -238 74 2 499 250 39 39 chr5 178283721 178283754 -24801778 - L1 LINE L1 -1089 5057 5025 2305 54 0 0 chr5 178283754 178284031 -24801501 + AluY SINE Alu 24 300 -11 499 250 39 39 chr5 178284031 178284253 -24801279 - L1 LINE L1 -1120 5026 4802 647 250 109 36 chr5 178284420 178284832 -24800700 - L1 LINE L1 -1380 4766 4325 294 197 49 0 chr5 178284856 178284917 -24800615 - L1MC4 LINE L1 -1166 6876 6813 * 2768 135 18 7 chr5 178284915 178285358 -24800174 + L1MA4 LINE L1 5575 6022 -278 394 287 28 21 chr5 178335540 178335683 -24749849 + MIR3 SINE MIR 24 167 -41 323 257 20 10 chr5 178335823 178335924 -24749608 - L2 LINE L2 -2 3270 3169 26 0 0 0 chr5 178335968 178335994 -24749538 + AT_rich Low_complexity Low_complexity 1 26 0 2743 3 0 0 chr5 178336059 178336385 -24749147 - AluYb8 SINE Alu 0 326 1 22 0 0 0 chr5 178336386 178336408 -24749124 + AT_rich Low_complexity Low_complexity 1 22 0 418 346 49 5 chr5 178337921 178338126 -24747406 - MIR SINE MIR -36 226 13 279 0 0 0 chr5 178338876 178338907 -24746625 + (TG)n Simple_repeat Simple_repeat 2 32 0 29 0 0 0 chr5 178339236 178339265 -24746267 + AT_rich Low_complexity Low_complexity 1 29 0 250 308 0 3 chr5 178339723 178339819 -24745713 - MIR SINE MIR -58 150 54 1001 77 36 6 chr5 178339838 178340006 -24745526 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 212 133 44 0 chr5 178340007 178340052 -24745480 + CT-rich Low_complexity Low_complexity 2 48 0 1283 161 189 16 chr5 178340056 178340304 -24745228 - AluJo SINE Alu -11 291 1 1904 169 6 13 chr5 178340698 178341012 -24744520 - AluJb SINE Alu 0 312 1 530 28 28 0 chr5 178341939 178342010 -24743522 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 2450 90 15 0 chr5 178342010 178342343 -24743189 - L1PA8 LINE L1 -21 6151 5814 939 204 0 15 chr5 178343147 178343343 -24742189 - L1MB8 LINE L1 -1 6177 5985 198 239 43 130 chr5 178343453 178343591 -24741941 + MIR SINE MIR 107 232 -30 294 167 0 0 chr5 178343591 178343639 -24741893 - 5S rRNA rRNA -73 48 1 787 130 0 0 chr5 178344656 178344771 -24740761 + AluJo SINE Alu 1 115 -187 1877 145 55 30 chr5 178344771 178345136 -24740396 + THE1C LTR MaLR 1 375 0 9790 125 27 35 chr5 178345138 178346687 -24738845 + THE1C-int LTR MaLR 3 1538 -42 37 0 0 0 chr5 178346701 178346738 -24738794 + AT_rich Low_complexity Low_complexity 1 37 0 9285 52 6 168 chr5 178346738 178348375 -24737157 - SVA Other Other -6 1380 10 1018 104 0 0 chr5 178348446 178348580 -24736952 - LTR10D LTR ERV1 0 513 380 1813 161 55 11 chr5 178348583 178348930 -24736602 + THE1C LTR MaLR 14 375 0 604 200 123 47 chr5 178348932 178349102 -24736430 + AluJo SINE Alu 112 294 -18 1892 269 56 21 chr5 178349405 178349797 -24735735 - L2 LINE L2 -8 3305 2928 444 19 0 0 chr5 178349797 178349850 -24735682 + (TG)n Simple_repeat Simple_repeat 2 54 0 1892 269 56 21 chr5 178349850 178350422 -24735110 - L2 LINE L2 -385 2928 2311 2077 108 4 0 chr5 178350766 178351034 -24734498 - AluSc SINE Alu -40 269 1 182 286 16 16 chr5 178351128 178351191 -24734341 - L2 LINE L2 0 3272 3210 1822 120 42 45 chr5 178351326 178351635 -24733897 - AluSx SINE Alu -4 308 1 422 215 81 40 chr5 178351768 178351917 -24733615 - L1ME4a LINE L1 -1 6120 5966 225 94 0 0 chr5 178352811 178352843 -24732689 + (T)n Simple_repeat Simple_repeat 1 32 0 1042 305 60 32 chr5 178353415 178353880 -24731652 + MLT1K LTR MaLR 89 566 -22 1121 249 103 26 chr5 178353979 178354329 -24731203 - LTR16C LTR ERVL -4 487 111 217 225 0 0 chr5 178354330 178354370 -24731162 + polypurine Low_complexity Low_complexity 1 40 0 616 229 23 0 chr5 178354416 178354547 -24730985 + MER103 DNA DNA 32 165 -1 1890 95 11 11 chr5 178354653 178354851 -24730681 + L1PB1 LINE L1 5888 6088 -63 2858 85 11 16 chr5 178354851 178355228 -24730304 + THE1C LTR MaLR 1 375 0 1890 95 11 11 chr5 178355228 178355293 -24730239 + L1PB1 LINE L1 6087 6151 0 23 0 0 0 chr5 178355372 178355395 -24730137 + AT_rich Low_complexity Low_complexity 1 23 0 1620 193 13 17 chr5 178355401 178355702 -24729830 + AluJb SINE Alu 1 300 -12 1258 160 141 8 chr5 178356226 178356365 -24729167 - L1 LINE L1 -850 5296 5177 198 0 0 0 chr5 178356365 178356387 -24729145 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1258 160 141 8 chr5 178356387 178356609 -24728923 - L1 LINE L1 -969 5177 4887 292 263 85 29 chr5 178356989 178357161 -24728371 + MLT1K LTR MaLR 421 583 -5 1042 212 101 50 chr5 178358693 178359051 -24726481 + L2 LINE L2 2937 3312 -1 2780 73 8 14 chr5 178359165 178359522 -24726010 - THE1A LTR MaLR 0 355 1 642 24 12 0 chr5 178359522 178359606 -24725926 - THE1A-int LTR MaLR 0 1580 1496 844 106 2 7 chr5 178359709 178359845 -24725687 + pTR5 LTR ERV1 125 392 -2046 292 357 24 0 chr5 178360733 178360817 -24724715 - L2 LINE L2 0 3272 3187 1305 153 19 5 chr5 178360969 178361178 -24724354 + AluJo SINE Alu 93 304 -8 782 224 98 23 chr5 178361493 178361707 -24723825 + MIR SINE MIR 21 250 -12 2168 116 7 7 chr5 178363966 178364267 -24721265 - AluSx SINE Alu -9 303 3 487 304 30 59 chr5 178364588 178364825 -24720707 + MIR SINE MIR 3 232 -30 325 240 0 107 chr5 178364857 178364962 -24720570 + MIR SINE MIR 116 202 -60 2192 112 0 3 chr5 178364962 178365256 -24720276 + AluSx SINE Alu 1 293 -19 325 240 0 107 chr5 178365256 178365300 -24720232 + MIR SINE MIR 202 249 -13 866 249 114 42 chr5 178366401 178366779 -24718753 + MLT1J2 LTR MaLR 44 448 -2 225 287 148 20 chr5 178367883 178367984 -24717548 + L2 LINE L2 3153 3266 -6 1226 289 89 42 chr5 178368453 178368796 -24716736 - MLT1L LTR MaLR 0 615 233 2395 98 0 7 chr5 178368796 178369103 -24716429 + AluSx SINE Alu 1 305 -7 1226 289 89 42 chr5 178369103 178369329 -24716203 - MLT1L LTR MaLR -382 233 19 1297 149 28 104 chr5 178369468 178369636 -24715896 - MER1B DNA MER1_type -2445 267 129 1953 156 10 0 chr5 178369636 178369937 -24715595 + AluSx SINE Alu 1 304 -8 1297 149 28 104 chr5 178369937 178370057 -24715475 - MER1B DNA MER1_type -2583 129 1 477 243 79 14 chr5 178372053 178372193 -24713339 + MIR SINE MIR 40 188 -74 1707 197 33 0 chr5 178373119 178373449 -24712083 + MER58B DNA MER1_type 1 341 0 267 357 53 23 chr5 178373730 178373901 -24711631 + L2 LINE L2 2556 2731 -583 * 343 239 120 21 chr5 178373894 178374036 -24711496 + L2 LINE L2 2969 3124 -189 1271 159 62 26 chr5 178374048 178374274 -24711258 - AluJb SINE Alu -78 234 1 383 348 19 7 chr5 178374274 178374429 -24711103 + L2 LINE L2 3101 3257 -56 640 274 62 49 chr5 178374893 178375200 -24710332 + LTR16A1 LTR ERVL 147 457 0 357 291 116 25 chr5 178376480 178376679 -24708853 + MIR SINE MIR 38 252 -10 192 308 0 121 chr5 178376697 178376788 -24708744 - MIR SINE MIR -112 96 17 866 210 6 13 chr5 178377341 178377498 -24708034 + AluJb SINE Alu 137 292 -20 468 284 142 25 chr5 178377653 178377850 -24707682 - MIR SINE MIR -15 247 28 374 206 117 31 chr5 178377879 178378035 -24707497 + MIR SINE MIR 42 208 -54 396 306 19 0 chr5 178378059 178378167 -24707365 - MER81 DNA DNA 0 114 5 490 272 178 6 chr5 178378572 178378752 -24706780 + MIR SINE MIR 49 259 -3 390 230 46 0 chr5 178378805 178378956 -24706576 + MER53 DNA DNA 4 189 0 363 279 19 19 chr5 178378971 178379075 -24706457 + MER81 DNA DNA 11 114 0 1269 280 48 34 chr5 178379818 178380364 -24705168 - L1ME LINE L1 -347 5823 5266 400 211 98 68 chr5 178380445 178380578 -24704954 + L2 LINE L2 3161 3297 -16 604 236 115 28 chr5 178380676 178380918 -24704614 + MIR SINE MIR 3 261 -1 966 97 0 58 chr5 178382548 178382702 -24702830 + MER39-int LTR ERV1 5743 5887 -444 1681 127 11 32 chr5 178382703 178382986 -24702546 - LTR23 LTR ERV1 0 437 161 651 153 88 29 chr5 178383059 178383196 -24702336 - LTR23 LTR ERV1 -286 151 7 1807 115 3 72 chr5 178383197 178383311 -24702221 + MER39-int LTR ERV1 5885 6005 -326 2590 141 47 5 chr5 178383311 178383716 -24701816 - MSTB LTR MaLR -1 425 4 1807 115 3 72 chr5 178383716 178383905 -24701627 + MER39-int LTR ERV1 6005 6167 -164 369 171 400 0 chr5 178384006 178384111 -24701421 + MER39 LTR ERV1 1 147 -560 * 944 205 142 63 chr5 178384089 178384469 -24701063 + LTR29 LTR ERV1 140 549 -73 2364 108 0 0 chr5 178384787 178385084 -24700448 - AluSg SINE Alu -13 297 1 646 261 166 14 chr5 178385476 178385687 -24699845 - MIR SINE MIR -2 260 18 225 0 0 0 chr5 178386081 178386106 -24699426 + (T)n Simple_repeat Simple_repeat 1 25 0 775 266 106 27 chr5 178386720 178387021 -24698511 - MER102a DNA MER1_type -1 329 5 994 296 102 45 chr5 178387644 178388175 -24697357 - MLT1K LTR MaLR -18 570 10 4250 99 46 14 chr5 178388531 178389156 -24696376 + L1MA2 LINE L1 5660 6304 0 237 259 196 0 chr5 178389299 178389411 -24696121 + MIR SINE MIR 129 262 0 202 333 44 0 chr5 178389433 178389523 -24696009 - MIR SINE MIR -49 213 120 339 238 40 0 chr5 178389976 178390077 -24695455 - MIR SINE MIR -9 253 149 618 309 83 18 chr5 178390118 178390335 -24695197 - MIR SINE MIR -20 242 12 636 237 46 12 chr5 178390542 178390715 -24694817 + MIR SINE MIR 69 247 -15 2334 108 0 0 chr5 178390807 178391114 -24694418 - AluSq SINE Alu -6 307 1 190 347 24 57 chr5 178391157 178391281 -24694251 + L2 LINE L2 3111 3230 -42 324 379 30 0 chr5 178393123 178393255 -24692277 - L2 LINE L2 0 3272 3137 242 191 21 0 chr5 178393255 178393302 -24692230 - L2 LINE L2 0 3313 3266 228 260 16 81 chr5 178393514 178393637 -24691895 + MIR SINE MIR 98 212 -50 2864 173 27 6 chr5 178394082 178394603 -24690929 - L1MA5 LINE L1 0 6300 5769 1493 160 35 31 chr5 178396616 178396904 -24688628 + AluJb SINE Alu 17 305 -7 1329 276 156 23 chr5 178397744 178398539 -24686993 - L1MC4a LINE L1 -1644 6164 5264 317 348 32 24 chr5 178398637 178398884 -24686648 - L1MC4a LINE L1 -989 5157 4909 409 331 28 28 chr5 178399839 178400020 -24685512 - MER5A DNA MER1_type 0 189 9 727 253 56 6 chr5 178400458 178400636 -24684896 - MER58A DNA MER1_type -2 222 36 279 218 0 0 chr5 178400717 178400772 -24684760 + MER117 DNA MER1_type 20 74 -123 193 370 103 0 chr5 178400994 178401140 -24684392 - MIR SINE MIR -85 177 17 198 150 0 0 chr5 178401354 178401394 -24684138 + (TG)n Simple_repeat Simple_repeat 2 41 0 668 200 0 0 chr5 178401554 178401679 -24683853 - L1MA10 LINE L1 -40 6294 6170 317 279 12 0 chr5 178401680 178401766 -24683766 + CT-rich Low_complexity Low_complexity 2 88 0 5111 154 33 14 chr5 178401770 178403028 -24682504 - L1MA9 LINE L1 -149 6163 4887 355 252 76 28 chr5 178403410 178403583 -24681949 + MLT1K LTR MaLR 421 583 -5 340 209 191 130 chr5 178403840 178404117 -24681415 + L2 LINE L2 3020 3313 0 3980 71 4 8 chr5 178404288 178404784 -24680748 - L1PA10 LINE L1 -15 6153 5660 1916 148 21 3 chr5 178405288 178405579 -24679953 - AluJb SINE Alu -16 296 1 1983 120 0 37 chr5 178405788 178406087 -24679445 - AluSx SINE Alu -24 288 1 261 234 181 84 chr5 178406233 178406320 -24679212 - MIR SINE MIR 0 262 185 207 0 0 0 chr5 178406320 178406343 -24679189 + (TTA)n Simple_repeat Simple_repeat 1 23 0 2243 84 7 0 chr5 178406352 178406636 -24678896 - AluSg SINE Alu -24 286 1 261 234 181 84 chr5 178406636 178406766 -24678766 - MIR SINE MIR -84 178 22 283 273 34 0 chr5 178407472 178407560 -24677972 - MIR3 SINE MIR -8 200 110 1060 223 110 28 chr5 178407634 178407998 -24677534 + LTR37A LTR ERV1 16 409 -17 1433 229 75 28 chr5 178408015 178408452 -24677080 + MER113 DNA MER1_type? 30 487 -34 464 346 161 17 chr5 178408899 178409304 -24676228 + L2 LINE L2 2212 2674 -640 3119 257 87 58 chr5 178409468 178409694 -24675838 + L2 LINE L2 1441 1659 -1654 1548 159 35 21 chr5 178409694 178409977 -24675555 - AluJb SINE Alu -25 287 1 182 37 37 0 chr5 178409980 178410007 -24675525 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3119 257 87 58 chr5 178410007 178410246 -24675286 + L2 LINE L2 1660 1891 -1422 207 0 0 0 chr5 178410246 178410269 -24675263 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1761 161 3 20 chr5 178410271 178410570 -24674962 - AluJb SINE Alu -18 294 1 3119 257 87 58 chr5 178410570 178411496 -24674036 + L2 LINE L2 1891 3176 -137 423 269 135 7 chr5 178411887 178412028 -24673504 + MIR SINE MIR 3 161 -101 365 345 7 14 chr5 178412699 178412841 -24672691 + MIR SINE MIR 13 153 -109 382 311 126 26 chr5 178412917 178413107 -24672425 + MIR SINE MIR 17 225 -37 898 269 65 28 chr5 178413686 178414151 -24671381 - L1M4 LINE L1 -1712 4434 3953 866 264 67 10 chr5 178415037 178415336 -24670196 - LTR16A LTR ERVL -1 449 134 214 268 62 80 chr5 178415416 178415528 -24670004 + L2 LINE L2 3159 3268 -4 324 48 0 0 chr5 178416036 178416078 -24669454 + (TG)n Simple_repeat Simple_repeat 1 42 0 436 310 19 13 chr5 178417204 178417381 -24668151 - MER5A DNA MER1_type 0 189 1 183 328 30 60 chr5 178417389 178417523 -24668009 + MIR3 SINE MIR 33 162 -46 30 27 0 0 chr5 178417632 178417669 -24667863 + AT_rich Low_complexity Low_complexity 1 37 0 480 297 33 42 chr5 178418029 178418241 -24667291 - L2 LINE L2 -30 3242 3033 260 369 59 31 chr5 178418546 178418768 -24666764 + L2 LINE L2 2451 2678 -636 626 201 0 92 chr5 178419422 178419545 -24665987 - MIR SINE MIR -6 256 154 2446 144 0 0 chr5 178419545 178419907 -24665625 - L1PA14 LINE L1 -9 6152 5791 626 201 0 92 chr5 178419907 178419967 -24665565 - MIR SINE MIR -108 154 90 22 0 0 0 chr5 178420475 178420497 -24665035 + AT_rich Low_complexity Low_complexity 1 22 0 339 281 103 4 chr5 178420599 178420880 -24664652 + L1ME4a LINE L1 5665 5973 -148 182 62 31 0 chr5 178420900 178420932 -24664600 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2056 121 4 0 chr5 178420935 178421216 -24664316 - AluSx SINE Alu -30 282 1 227 133 22 0 chr5 178421467 178421512 -24664020 + (TA)n Simple_repeat Simple_repeat 1 46 0 298 220 66 0 chr5 178421571 178421662 -24663870 + L1ME4a LINE L1 6020 6116 -5 270 313 76 73 chr5 178421758 178422046 -24663486 + L2 LINE L2 2997 3288 -25 2340 102 3 0 chr5 178422046 178422351 -24663181 - AluSq SINE Alu -7 306 1 270 313 76 73 chr5 178422351 178422378 -24663154 + L2 LINE L2 3288 3313 0 281 307 51 15 chr5 178422796 178422933 -24662599 + MIR3 SINE MIR 36 177 -31 472 208 63 145 chr5 178423180 178423301 -24662231 + MIR SINE MIR 45 142 -120 2084 76 3 69 chr5 178423301 178423604 -24661928 - AluSp SINE Alu -30 283 1 472 208 63 145 chr5 178423604 178423703 -24661829 + MIR SINE MIR 142 247 -15 278 290 172 11 chr5 178423969 178424155 -24661377 - MIR SINE MIR -46 216 1 620 292 29 19 chr5 178424986 178425195 -24660337 - MIR SINE MIR -19 243 33 198 280 149 28 chr5 178425206 178425313 -24660219 - MIR3 SINE MIR -86 122 3 479 164 207 0 chr5 178425490 178425606 -24659926 - L1ME4a LINE L1 0 6121 5982 332 279 110 32 chr5 178426298 178426452 -24659080 - MIR3 SINE MIR -27 181 16 2188 135 0 0 chr5 178426594 178426890 -24658642 - AluSx SINE Alu -11 301 6 243 343 243 0 chr5 178427038 178427248 -24658284 - MIR SINE MIR 0 262 2 1393 217 0 4 chr5 178427326 178427566 -24657966 - MER8 DNA MER2_type 0 239 1 273 375 48 30 chr5 178428937 178429105 -24656427 + MIR3 SINE MIR 20 190 -18 411 242 78 8 chr5 178429968 178430096 -24655436 - L1ME4a LINE L1 -6 6115 5979 264 263 106 28 chr5 178430102 178430281 -24655251 - L2 LINE L2 -431 2883 2691 24 32 0 0 chr5 178430700 178430731 -24654801 + AT_rich Low_complexity Low_complexity 1 31 0 259 294 40 16 chr5 178430765 178430891 -24654641 - L1MC5 LINE L1 -51 7910 7782 1111 149 56 33 chr5 178431064 178431278 -24654254 + THE1C LTR MaLR 157 375 0 395 331 47 0 chr5 178432139 178432287 -24653245 - MIR SINE MIR -56 206 52 180 240 20 20 chr5 178432586 178432636 -24652896 + L2 LINE L2 3248 3297 -16 208 277 117 11 chr5 178432869 178432963 -24652569 + L2 LINE L2 3169 3272 0 680 271 54 29 chr5 178432988 178433228 -24652304 + MIR SINE MIR 9 254 -8 28 61 0 0 chr5 178433730 178433779 -24651753 + AT_rich Low_complexity Low_complexity 1 49 0 1652 189 0 17 chr5 178433829 178434131 -24651401 - AluJo SINE Alu -15 297 1 655 319 79 27 chr5 178434219 178434548 -24650984 - L2 LINE L2 -164 3149 2804 3345 207 71 29 chr5 178434587 178435486 -24650046 + Zaphod DNA AcHobo 52 988 -3043 886 209 122 88 chr5 178435487 178435898 -24649634 + Zaphod DNA AcHobo 3596 4020 -11 730 260 140 23 chr5 178435911 178436261 -24649271 - L2 LINE L2 -516 2798 2408 392 248 0 40 chr5 178436262 178436363 -24649169 + MIR SINE MIR 158 254 -8 217 360 44 7 chr5 178436384 178436520 -24649012 - MIR SINE MIR -70 192 52 787 290 24 10 chr5 178436851 178437058 -24648474 - MIR SINE MIR -8 254 45 410 293 53 8 chr5 178437075 178437208 -24648324 - MIR3 SINE MIR -54 154 16 2011 114 0 35 chr5 178437785 178438098 -24647434 - AluSc SINE Alu 0 303 1 222 118 0 0 chr5 178438828 178438862 -24646670 + (T)n Simple_repeat Simple_repeat 1 34 0 352 262 90 0 chr5 178439827 178439949 -24645583 - MER94 DNA DNA -1 133 1 1032 156 69 0 chr5 178439952 178440125 -24645407 + MER5A DNA MER1_type 1 185 -4 202 288 173 3 chr5 178440135 178440278 -24645254 - MIR SINE MIR -35 227 22 380 284 181 56 chr5 178440847 178441062 -24644470 + MIR SINE MIR 3 244 -18 325 326 0 0 chr5 178441750 178441848 -24643684 + MIR SINE MIR 116 213 -49 216 0 0 0 chr5 178443266 178443290 -24642242 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr5 178443388 178443409 -24642123 + AT_rich Low_complexity Low_complexity 1 21 0 223 235 0 0 chr5 178445122 178445173 -24640359 + (CA)n Simple_repeat Simple_repeat 2 52 0 1773 125 108 46 chr5 178445999 178446201 -24639331 - THE1C LTR MaLR -2 373 137 2101 80 29 4 chr5 178446201 178446508 -24639024 + AluSg SINE Alu 1 314 0 1773 125 108 46 chr5 178446508 178446655 -24638877 - THE1C LTR MaLR -238 137 1 25 51 0 0 chr5 178447329 178447368 -24638164 + AT_rich Low_complexity Low_complexity 1 39 0 849 249 70 8 chr5 178447722 178447979 -24637553 - L1ME LINE L1 -304 5817 5545 410 304 34 14 chr5 178448568 178448716 -24636816 - MIR SINE MIR -111 151 1 1893 135 33 23 chr5 178448732 178449035 -24636497 + AluSx SINE Alu 1 306 -6 1260 184 9 9 chr5 178449233 178449451 -24636081 - MER20 DNA MER1_type 0 219 2 434 335 72 47 chr5 178449801 178450037 -24635495 + MIR SINE MIR 1 242 -20 555 318 79 26 chr5 178450701 178450896 -24634636 + MLT1K LTR MaLR 143 357 -231 2270 116 0 3 chr5 178450896 178451207 -24634325 - AluSq SINE Alu -3 310 1 555 318 79 26 chr5 178451207 178451278 -24634254 + MLT1K LTR MaLR 357 423 -165 493 359 110 17 chr5 178451566 178451976 -24633556 - L2 LINE L2 -8 3264 2817 207 167 0 0 chr5 178451996 178452038 -24633494 + GA-rich Low_complexity Low_complexity 1 42 0 297 292 0 0 chr5 178452906 178452978 -24632554 - L2 LINE L2 0 3272 3201 275 315 11 11 chr5 178453100 178453189 -24632343 - MIR SINE MIR -89 173 85 209 222 16 0 chr5 178453267 178453330 -24632202 + (TA)n Simple_repeat Simple_repeat 2 65 0 354 268 92 39 chr5 178455014 178455167 -24630365 + L2 LINE L2 2913 3073 -199 582 280 108 51 chr5 178455389 178455842 -24629690 + L2 LINE L2 2830 3308 -5 674 233 56 6 chr5 178456141 178456321 -24629211 + MER117 DNA MER1_type 1 189 -8 2027 154 0 3 chr5 178456439 178456750 -24628782 - AluJb SINE Alu -2 310 1 669 275 54 67 chr5 178457521 178457938 -24627594 + L1MC4a LINE L1 5549 5960 -161 1224 264 68 9 chr5 178458298 178458620 -24626912 + MLT1I LTR MaLR 66 406 -3 313 172 0 16 chr5 178458663 178458727 -24626805 + MIR SINE MIR 27 89 -119 835 291 159 48 chr5 178458730 178459252 -24626280 - MLT1L LTR MaLR -2 613 34 233 286 65 0 chr5 178459269 178459346 -24626186 + MIR3 SINE MIR 86 167 -41 298 304 55 55 chr5 178460717 178460918 -24624614 - L1ME3A LINE L1 -5 6165 5965 1607 216 106 45 chr5 178461009 178461565 -24623967 - L1MC5 LINE L1 -430 7531 6942 207 0 0 0 chr5 178462135 178462158 -24623374 + (T)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr5 178462206 178462229 -24623303 + (T)n Simple_repeat Simple_repeat 1 23 0 295 301 6 109 chr5 178463658 178463814 -24621718 + L3 LINE CR1 1430 1569 -8 381 301 60 8 chr5 178464588 178464721 -24620811 - MER117 DNA MER1_type -24 173 34 1800 244 150 22 chr5 178464721 178465310 -24620222 + L2 LINE L2 1814 2506 -808 230 0 0 32 chr5 178465310 178465341 -24620191 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 1800 244 150 22 chr5 178465341 178465443 -24620089 + L2 LINE L2 2506 2594 -720 387 202 30 40 chr5 178465628 178465727 -24619805 + L2 LINE L2 2596 2693 -621 661 304 92 28 chr5 178465748 178466139 -24619393 + L2 LINE L2 2846 3261 -52 380 259 133 51 chr5 178466145 178466520 -24619012 - LTR16A1 LTR ERVL 0 457 52 440 279 78 17 chr5 178467245 178467424 -24618108 - MIR SINE MIR -25 237 48 186 208 42 0 chr5 178467478 178467526 -24618006 - L2 LINE L2 -86 3186 3137 437 266 70 0 chr5 178467658 178467786 -24617746 - MLT1L LTR MaLR -4 611 475 333 68 0 0 chr5 178468015 178468059 -24617473 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 1818 118 7 32 chr5 178468059 178468338 -24617194 - AluSq SINE Alu -41 272 1 393 238 16 48 chr5 178469706 178469832 -24615700 + MIR SINE MIR 141 262 0 277 326 33 54 chr5 178470377 178470498 -24615034 - MIR SINE MIR -6 256 141 414 0 0 0 chr5 178470498 178470544 -24614988 + (CA)n Simple_repeat Simple_repeat 2 47 0 277 326 33 54 chr5 178470544 178470664 -24614868 - MIR SINE MIR -121 141 20 468 235 0 0 chr5 178471002 178471104 -24614428 - MER117 DNA MER1_type -49 148 47 280 359 38 8 chr5 178471551 178471682 -24613850 - MIR SINE MIR -79 183 49 201 258 15 8 chr5 178471789 178471921 -24613611 + (CATA)n Simple_repeat Simple_repeat 4 136 0 354 313 41 14 chr5 178472695 178472842 -24612690 - MIR3 SINE MIR -13 195 45 183 343 61 28 chr5 178473339 178473552 -24611980 + L2 LINE L2 1947 2166 -1148 780 165 47 0 chr5 178473625 178473752 -24611780 - FLAM_C SINE Alu 0 133 1 335 227 93 31 chr5 178473837 178473934 -24611598 + MER63 DNA MER1_type 4 732 -330 532 227 42 150 chr5 178473939 178474292 -24611240 - L2 LINE L2 0 3313 2999 601 245 137 72 chr5 178474328 178474577 -24610955 + MLT1K LTR MaLR 253 517 -71 283 301 7 63 chr5 178474646 178474789 -24610743 + L2 LINE L2 2190 2324 -990 1848 173 73 34 chr5 178475131 178475513 -24610019 - MLT2C1 LTR ERVL 0 397 1 415 260 87 43 chr5 178475716 178475924 -24609608 - MER112 DNA MER1_type -43 217 1 23 0 0 0 chr5 178476439 178476462 -24609070 + AT_rich Low_complexity Low_complexity 1 23 0 377 252 27 61 chr5 178476856 178477003 -24608529 + MIR SINE MIR 15 156 -106 651 277 19 10 chr5 178477010 178477216 -24608316 - MIR SINE MIR -1 261 54 1592 183 16 29 chr5 178477938 178478276 -24607256 - AluJo SINE Alu 0 312 1 264 30 0 0 chr5 178479716 178479749 -24605783 + (T)n Simple_repeat Simple_repeat 1 33 0 925 215 61 67 chr5 178479804 178480180 -24605352 - MER96B DNA MER1_type? -43 374 1 257 271 82 115 chr5 178481382 178481484 -24604048 - MIR SINE MIR -19 243 139 2260 147 0 3 chr5 178481484 178481844 -24603688 - L1PB1 LINE L1 0 6151 5793 257 271 82 115 chr5 178481844 178481985 -24603547 - MIR SINE MIR -123 139 8 2113 121 3 3 chr5 178483286 178483575 -24601957 - AluJo SINE Alu -23 289 1 201 402 27 27 chr5 178483898 178484082 -24601450 - L3b LINE CR1 -188 1395 1212 350 301 20 17 chr5 178484550 178484754 -24600778 + MIR SINE MIR 16 220 -42 497 271 33 0 chr5 178485176 178485298 -24600234 - L2 LINE L2 0 3272 3147 320 318 47 0 chr5 178485636 178485743 -24599789 - MER91C DNA MER1_type -28 112 1 2052 119 7 3 chr5 178485790 178486085 -24599447 - AluSx SINE Alu -16 296 1 403 291 24 6 chr5 178486972 178487137 -24598395 + MIR SINE MIR 84 251 -11 210 143 0 0 chr5 178487154 178487189 -24598343 + (GAA)n Simple_repeat Simple_repeat 3 37 0 365 270 203 0 chr5 178488121 178488269 -24597263 + MIR SINE MIR 64 241 -21 282 272 158 18 chr5 178488385 178488499 -24597033 - MIR SINE MIR -59 149 20 657 279 34 6 chr5 178488878 178489057 -24596475 - MIR SINE MIR -64 198 15 210 298 0 0 chr5 178489776 178489823 -24595709 - L3 LINE CR1 -6 1571 1525 371 296 14 56 chr5 178489823 178489965 -24595567 - MER117 DNA MER1_type -7 190 55 431 227 13 84 chr5 178490146 178490300 -24595232 + MIR3 SINE MIR 39 181 -27 461 259 29 75 chr5 178490429 178490603 -24594929 - MER117 DNA MER1_type -27 170 5 580 171 9 9 chr5 178490603 178490708 -24594824 + MLT1B LTR MaLR 1 105 -285 2557 52 3 10 chr5 178490837 178491146 -24594386 + AluY SINE Alu 1 307 -4 236 296 15 59 chr5 178492102 178492237 -24593295 + G-rich Low_complexity Low_complexity 5 133 0 486 273 50 58 chr5 178493015 178493257 -24592275 + MIR SINE MIR 16 255 -7 511 233 56 0 chr5 178493685 178493831 -24591701 + MER58C DNA MER1_type 60 215 0 449 239 17 94 chr5 178494025 178494205 -24591327 + MIR SINE MIR 67 232 -30 189 171 0 0 chr5 178494877 178494912 -24590620 + A-rich Low_complexity Low_complexity 1 35 0 201 74 0 0 chr5 178495367 178495394 -24590138 + (TG)n Simple_repeat Simple_repeat 1 27 0 1052 252 128 34 chr5 178495956 178496393 -24589139 + LTR33 LTR ERVL 15 492 -29 519 268 89 6 chr5 178496435 178496592 -24588940 + MIR3 SINE MIR 34 203 -5 494 302 57 24 chr5 178496599 178496811 -24588721 + MIR SINE MIR 5 223 -39 2010 142 3 0 chr5 178497367 178497655 -24587877 + AluSx SINE Alu 1 289 -23 2210 109 3 0 chr5 178498683 178498967 -24586565 - AluSc SINE Alu -24 285 1 341 322 52 33 chr5 178499137 178499348 -24586184 - L1ME3A LINE L1 -30 6140 5926 32507 31 1 0 chr5 178499465 178504068 -24581464 + L1PA3 LINE L1 2193 6806 0 2484 87 0 0 chr5 178504563 178504872 -24580660 - AluSc SINE Alu 0 309 1 2115 225 80 80 chr5 178506400 178507352 -24578180 - L1MC5 LINE L1 -430 7531 6563 2558 56 13 0 chr5 178507456 178507758 -24577774 - AluY SINE Alu 0 311 6 912 290 93 36 chr5 178508046 178508574 -24576958 - HAL1b LINE L1 -734 614 57 2093 200 45 53 chr5 178509176 178509567 -24575965 - MLT1D LTR MaLR 0 505 117 3146 126 9 6 chr5 178509567 178510034 -24575498 - L1PA16 LINE L1 -6 6160 5693 2093 200 45 53 chr5 178510034 178510151 -24575381 - MLT1D LTR MaLR -388 117 1 25 0 0 0 chr5 178511683 178511708 -24573824 + AT_rich Low_complexity Low_complexity 1 25 0 2265 163 34 60 chr5 178513031 178513468 -24572064 + MSTB LTR MaLR 1 426 0 409 291 107 21 chr5 178513468 178513704 -24571828 - Charlie8 DNA MER1_type -989 1428 73 221 367 22 0 chr5 178513748 178513838 -24571694 + MIR3 SINE MIR 117 208 0 22 0 0 0 chr5 178514112 178514134 -24571398 + AT_rich Low_complexity Low_complexity 1 22 0 180 373 22 8 chr5 178514676 178514810 -24570722 + L2 LINE L2 3178 3313 0 1975 128 148 63 chr5 178515858 178516257 -24569275 + Tigger2a DNA MER2_type 2 434 0 24 32 0 0 chr5 178516349 178516380 -24569152 + AT_rich Low_complexity Low_complexity 1 31 0 250 200 0 0 chr5 178517471 178517511 -24568021 + MER20 DNA MER1_type 30 69 -150 767 192 34 45 chr5 178517512 178517689 -24567843 + MER20 DNA MER1_type 45 219 0 505 261 43 12 chr5 178519858 178520019 -24565513 - MIR SINE MIR -17 245 80 334 289 29 10 chr5 178520231 178520335 -24565197 - MIR SINE MIR -109 153 48 230 225 36 145 chr5 178520336 178520468 -24565064 + L2 LINE L2 3150 3267 0 2162 136 0 3 chr5 178520468 178520769 -24564763 - AluSx SINE Alu -12 300 1 362 253 31 82 chr5 178520846 178521040 -24564492 - MIR SINE MIR 0 262 79 966 222 11 0 chr5 178521053 178521242 -24564290 + MER20 DNA MER1_type 29 219 0 243 222 178 22 chr5 178521243 178521333 -24564199 - MIR SINE MIR -154 108 5 332 283 22 0 chr5 178521861 178521953 -24563579 - MIR SINE MIR -16 246 153 516 262 0 8 chr5 178521959 178522081 -24563451 + MER45A DNA AcHobo 57 177 -1 478 269 58 13 chr5 178522415 178522571 -24562961 - MIR SINE MIR -18 244 82 391 274 104 0 chr5 178522572 178522707 -24562825 + MIR SINE MIR 47 195 -67 269 329 0 13 chr5 178522726 178522802 -24562730 + L2 LINE L2 3208 3282 -31 347 293 120 65 chr5 178522802 178523037 -24562495 - MLT1H LTR MaLR 0 549 280 2686 42 0 0 chr5 178523037 178523347 -24562185 - AluY SINE Alu -1 310 1 347 293 120 65 chr5 178523347 178523528 -24562004 - MLT1H LTR MaLR -269 280 110 232 247 103 41 chr5 178524921 178525018 -24560514 - L2 LINE L2 -8 3305 3203 212 241 52 0 chr5 178525117 178525175 -24560357 - L2 LINE L2 -33 3280 3220 416 225 34 0 chr5 178525433 178525522 -24560010 + MIR SINE MIR 27 118 -90 605 241 75 0 chr5 178526028 178526227 -24559305 + MLT1J2 LTR MaLR 23 236 -214 306 186 17 0 chr5 178526466 178526525 -24559007 - MLT1K LTR MaLR -14 574 515 195 69 0 0 chr5 178526525 178526554 -24558978 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 661 302 82 31 chr5 178526588 178526879 -24558653 - MLT1K LTR MaLR -145 443 138 274 146 21 0 chr5 178527001 178527049 -24558483 - MLT2B3 LTR ERVL 0 554 506 236 196 0 0 chr5 178527049 178527095 -24558437 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 2966 139 65 16 chr5 178527095 178527591 -24557941 - MLT2B3 LTR ERVL -34 520 1 305 239 46 37 chr5 178527591 178527700 -24557832 - MIR SINE MIR -4 258 149 2550 57 0 0 chr5 178527890 178528187 -24557345 + L1PA5 LINE L1 5857 6153 -1 1736 164 58 65 chr5 178528646 178529092 -24556440 + LTR47B LTR ERVL 1 443 0 1015 219 101 94 chr5 178529377 178529824 -24555708 + MLT1J2 LTR MaLR 1 450 0 1107 177 5 55 chr5 178530885 178531105 -24554427 - MER3 DNA MER1_type 0 209 1 504 267 23 30 chr5 178531716 178531847 -24553685 + L2 LINE L2 3183 3312 -1 372 310 54 8 chr5 178532425 178532554 -24552978 + MIR SINE MIR 30 164 -98 3274 83 0 0 chr5 178532644 178533053 -24552479 - L1PA8 LINE L1 -2 6170 5762 689 284 39 5 chr5 178533337 178533541 -24551991 - MIR SINE MIR -3 259 49 244 274 16 0 chr5 178533983 178534045 -24551487 + L2 LINE L2 2599 2661 -653 1643 282 103 29 chr5 178534069 178534795 -24550737 + L2 LINE L2 1755 2534 -780 634 288 64 13 chr5 178535394 178535630 -24549902 - MIR SINE MIR -5 257 10 360 0 0 0 chr5 178537401 178537441 -24548091 + (TG)n Simple_repeat Simple_repeat 1 40 0 707 301 20 15 chr5 178537806 178538009 -24547523 - MIR SINE MIR -53 209 6 312 314 20 0 chr5 178538180 178538282 -24547250 - MIR SINE MIR -3 259 156 228 252 103 19 chr5 178538586 178538693 -24546839 + MER113 DNA MER1_type? 1 116 -405 2166 105 3 45 chr5 178538721 178539035 -24546497 - AluSx SINE Alu -9 303 3 21 0 0 0 chr5 178539064 178539085 -24546447 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr5 178540121 178540148 -24545384 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 252 0 0 0 chr5 178541095 178541123 -24544409 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 2291 90 0 35 chr5 178541123 178541433 -24544099 - AluSx SINE Alu -13 299 1 2351 194 76 8 chr5 178541480 178541953 -24543579 + MLT1D LTR MaLR 1 505 0 301 193 108 24 chr5 178542159 178542242 -24543290 + L2 LINE L2 3221 3310 -3 210 37 0 0 chr5 178542504 178542531 -24543001 + (TC)n Simple_repeat Simple_repeat 2 28 0 360 0 0 0 chr5 178542535 178542575 -24542957 + (TA)n Simple_repeat Simple_repeat 2 41 0 418 309 33 48 chr5 178543429 178543527 -24542005 - MIR SINE MIR -5 257 159 932 234 48 0 chr5 178543527 178543736 -24541796 + MER20 DNA MER1_type 1 219 0 418 309 33 48 chr5 178543736 178543847 -24541685 - MIR SINE MIR -103 159 51 315 0 0 0 chr5 178543854 178543889 -24541643 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3629 36 2 2 chr5 178543929 178544343 -24541189 - L1PA4 LINE L1 -2 6153 5740 363 306 53 12 chr5 178544795 178544965 -24540567 + L2 LINE L2 2915 3091 -181 1134 176 37 16 chr5 178544992 178545236 -24540296 - Charlie5 DNA MER1_type -32 2580 2332 581 161 65 52 chr5 178545237 178545392 -24540140 - Charlie5 DNA MER1_type -2422 190 34 418 315 63 28 chr5 178545435 178545578 -24539954 + L2 LINE L2 3123 3270 -2 14333 26 5 0 chr5 178545675 178548023 -24537509 + L1PA3 LINE L1 3802 6154 -1 381 236 45 9 chr5 178548123 178548233 -24537299 + MER103 DNA DNA 8 121 -45 2509 111 16 27 chr5 178548461 178548829 -24536703 - THE1B LTR MaLR 0 364 1 393 181 14 0 chr5 178549107 178549179 -24536353 + MER116 DNA Mariner 7 79 -1 775 263 111 30 chr5 178549200 178549633 -24535899 + L1ME4a LINE L1 5521 5988 -133 330 303 66 0 chr5 178550042 178550164 -24535368 - MIR SINE MIR -73 189 60 625 310 43 16 chr5 178550300 178550555 -24534977 + MIR SINE MIR 1 262 0 211 232 49 98 chr5 178550569 178550651 -24534881 - MIR SINE MIR -108 154 77 501 303 56 28 chr5 178551282 178551533 -24533999 - MIR SINE MIR 0 262 5 199 273 18 0 chr5 178551547 178551602 -24533930 - MIR SINE MIR -58 150 95 334 284 11 11 chr5 178551625 178551720 -24533812 + MIR SINE MIR 156 250 -12 233 161 214 0 chr5 178552030 178552086 -24533446 - MIR3 SINE MIR -2 206 139 12724 26 5 0 chr5 178552260 178554436 -24531096 + L1PA3 LINE L1 3978 6154 -1 381 236 45 9 chr5 178554537 178554647 -24530885 + MER103 DNA DNA 8 121 -45 2517 106 19 27 chr5 178554875 178555242 -24530290 - THE1B LTR MaLR 0 364 1 393 181 14 0 chr5 178555520 178555592 -24529940 + MER116 DNA Mariner 7 79 -1 775 263 111 30 chr5 178555613 178556046 -24529486 + L1ME4a LINE L1 5521 5988 -133 330 303 66 0 chr5 178556455 178556577 -24528955 - MIR SINE MIR -73 189 60 632 310 43 16 chr5 178556713 178556968 -24528564 + MIR SINE MIR 1 262 0 211 232 49 98 chr5 178556982 178557064 -24528468 - MIR SINE MIR -108 154 77 192 299 134 10 chr5 178557457 178557554 -24527978 + MIR SINE MIR 77 185 -77 241 191 225 0 chr5 178558034 178558123 -24527409 + MER5A DNA MER1_type 6 114 -75 258 306 113 0 chr5 178558176 178558300 -24527232 - MIR SINE MIR -55 153 16 258 231 102 46 chr5 178558305 178558413 -24527119 - LTR67 LTR ERVL -10 547 434 21 57 0 0 chr5 178560728 178560763 -24524769 + AT_rich Low_complexity Low_complexity 1 35 0 613 282 146 9 chr5 178560989 178561202 -24524330 + MIR SINE MIR 2 243 -19 318 256 12 0 chr5 178561251 178561333 -24524199 - MER117 DNA MER1_type -33 164 82 369 198 123 0 chr5 178561708 178561789 -24523743 - MIR3 SINE MIR -28 180 90 201 178 0 0 chr5 178561879 178561924 -24523608 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 207 69 0 0 chr5 178562786 178562815 -24522717 + (TA)n Simple_repeat Simple_repeat 2 30 0 727 280 133 0 chr5 178562831 178563042 -24522490 - MIR SINE MIR -21 241 3 1168 172 60 115 chr5 178563129 178563512 -24522020 - MLT1A1 LTR MaLR -3 362 1 1375 202 28 63 chr5 178563625 178563942 -24521590 - AluJb SINE Alu -3 309 4 1668 203 157 21 chr5 178563969 178564447 -24521085 + MLT1F1 LTR MaLR 23 565 -2 359 319 8 25 chr5 178564756 178564875 -24520657 + L2 LINE L2 3195 3311 -2 284 277 0 0 chr5 178565110 178565175 -24520357 - L2 LINE L2 -2 3270 3206 233 230 53 44 chr5 178565788 178565901 -24519631 + MER117 DNA MER1_type 56 169 -28 216 306 8 37 chr5 178566006 178566140 -24519392 + CT-rich Low_complexity Low_complexity 3 132 0 216 0 0 0 chr5 178566888 178566912 -24518620 + (T)n Simple_repeat Simple_repeat 1 24 0 377 306 0 55 chr5 178567733 178568032 -24517500 + CT-rich Low_complexity Low_complexity 1 282 0 428 321 33 92 chr5 178568123 178568515 -24517017 - MLT1K LTR MaLR -218 370 2 246 128 0 0 chr5 178568955 178568994 -24516538 + (A)n Simple_repeat Simple_repeat 1 39 0 371 297 31 8 chr5 178570236 178570364 -24515168 - MIR SINE MIR -4 258 128 469 281 43 11 chr5 178570372 178570557 -24514975 + LTR33 LTR ERVL 1 191 -330 317 339 26 0 chr5 178570566 178570681 -24514851 + MIR SINE MIR 33 150 -112 247 226 0 0 chr5 178570764 178570826 -24514706 - L1MC4 LINE L1 -1341 6701 6640 261 208 0 0 chr5 178570834 178570906 -24514626 + (TA)n Simple_repeat Simple_repeat 2 73 0 595 297 123 3 chr5 178571181 178571531 -24514001 - L1 LINE L1 -2210 3936 3545 440 293 203 35 chr5 178571613 178571693 -24513839 - L1 LINE L1 -2664 3482 3417 2607 43 0 10 chr5 178571693 178571997 -24513535 + AluY SINE Alu 1 301 -10 440 293 203 35 chr5 178571997 178572398 -24513134 - L1 LINE L1 -2729 3417 2920 231 275 74 7 chr5 178572656 178572805 -24512727 - L1 LINE L1 -1551 4595 4437 544 337 70 23 chr5 178572840 178573267 -24512265 - L1 LINE L1 -1722 4424 3978 248 272 121 23 chr5 178573330 178573587 -24511945 - L1 LINE L1 -2191 3955 3674 322 330 55 103 chr5 178573732 178574023 -24511509 + L2 LINE L2 2983 3259 -13 1551 78 0 0 chr5 178574316 178574520 -24511012 - L1PA8 LINE L1 -2 6170 5967 1359 315 86 27 chr5 178574706 178575443 -24510089 + L3 LINE CR1 791 1570 -7 327 316 95 24 chr5 178575448 178575616 -24509916 + L2 LINE L2 3091 3270 -2 536 227 233 0 chr5 178575823 178575973 -24509559 + MIR SINE MIR 2 186 -76 198 0 0 0 chr5 178575973 178575995 -24509537 + (TG)n Simple_repeat Simple_repeat 1 22 0 1839 161 10 7 chr5 178576158 178576450 -24509082 - AluJb SINE Alu -19 293 1 226 236 112 22 chr5 178576479 178576568 -24508964 + MIR SINE MIR 19 115 -93 692 234 25 30 chr5 178577656 178577857 -24507675 - MIR SINE MIR -8 254 55 370 246 94 105 chr5 178578343 178578620 -24506912 + MLT1L LTR MaLR 29 302 -313 789 288 159 20 chr5 178578715 178579219 -24506313 - MLT1L LTR MaLR -39 576 3 481 251 56 28 chr5 178579260 178579439 -24506093 + MLT1L LTR MaLR 410 593 -22 495 276 0 0 chr5 178579795 178579900 -24505632 - L2 LINE L2 -1 3312 3208 444 309 56 20 chr5 178580089 178580338 -24505194 - MIR SINE MIR 0 262 5 200 273 18 0 chr5 178580352 178580407 -24505125 - MIR SINE MIR -58 150 95 339 284 11 11 chr5 178580430 178580525 -24505007 + MIR SINE MIR 156 250 -12 236 161 214 0 chr5 178580835 178580891 -24504641 - MIR3 SINE MIR -2 206 139 11907 27 8 0 chr5 178581065 178583224 -24502308 + L1PA3 LINE L1 3978 6141 -14 1970 248 26 6 chr5 178583282 178583822 -24501710 - L1ME3A LINE L1 -59 6111 5561 277 239 264 57 chr5 178583951 178584110 -24501422 - L2 LINE L2 -20 3293 3102 321 353 0 35 chr5 178584856 178584972 -24500560 - L2 LINE L2 -1 3271 3160 22 35 0 0 chr5 178586202 178586231 -24499301 + AT_rich Low_complexity Low_complexity 1 29 0 231 333 116 0 chr5 178586628 178586757 -24498775 + MIR SINE MIR 111 254 -8 1927 121 0 8 chr5 178586920 178587185 -24498347 + AluSq SINE Alu 38 300 -13 1017 188 140 17 chr5 178589864 178590228 -24495304 + MER57A LTR ERV1 22 403 0 191 286 0 0 chr5 178590403 178590445 -24495087 + MER5A DNA MER1_type 144 185 -4 453 269 34 20 chr5 178591715 178591864 -24493668 + L2 LINE L2 3162 3312 -1 225 287 69 11 chr5 178591870 178591957 -24493575 + MIR SINE MIR 51 142 -120 551 258 48 36 chr5 178592048 178592215 -24493317 - L2 LINE L2 -5 3308 3140 7220 26 2 0 chr5 178592240 178593132 -24492400 - L1PA4 LINE L1 0 6155 5262 262 298 96 0 chr5 178593145 178593239 -24492293 + L2 LINE L2 3141 3243 -29 231 267 134 31 chr5 178593443 178593594 -24491938 - MIR SINE MIR -58 150 18 969 269 103 56 chr5 178594382 178594549 -24490983 + L2 LINE L2 2806 2964 -349 1087 227 5 0 chr5 178594549 178594765 -24490767 + MER20 DNA MER1_type 2 218 -1 969 269 103 56 chr5 178594765 178595081 -24490451 + L2 LINE L2 2964 3312 -1 22 70 0 0 chr5 178596374 178596417 -24489115 + AT_rich Low_complexity Low_complexity 1 43 0 467 231 38 94 chr5 178598356 178598568 -24486964 + MLT1H LTR MaLR 107 306 -243 763 357 48 43 chr5 178598710 178599380 -24486152 + L2 LINE L2 2004 2676 -638 305 326 45 22 chr5 178600125 178600214 -24485318 - L3b LINE CR1 -26 1557 1467 1667 173 60 0 chr5 178600915 178601233 -24484299 + MER58B DNA MER1_type 4 340 -1 588 257 67 76 chr5 178601234 178601697 -24483835 + MLT1L LTR MaLR 148 606 -9 305 363 128 49 chr5 178601699 178602065 -24483467 - L2 LINE L2 -25 3247 2853 15001 119 35 9 chr5 178602169 178603221 -24482311 + Tigger1 DNA MER2_type 1 1025 -1393 2194 122 0 3 chr5 178603221 178603524 -24482008 - AluSq SINE Alu -11 302 1 15001 119 35 9 chr5 178603524 178604828 -24480704 + Tigger1 DNA MER2_type 1025 2417 -1 549 303 88 1 chr5 178604900 178605110 -24480422 - MIR SINE MIR -12 250 27 180 111 0 0 chr5 178605333 178605360 -24480172 + (CA)n Simple_repeat Simple_repeat 2 28 0 761 227 63 44 chr5 178605741 178605993 -24479539 + MIR SINE MIR 9 262 0 573 340 65 52 chr5 178607030 178607552 -24477980 + L2 LINE L2 2456 2982 -290 515 263 36 15 chr5 178607833 178607970 -24477562 - MIR SINE MIR -93 169 30 393 269 121 0 chr5 178609134 178609210 -24476322 + L1ME LINE L1 5519 5584 -537 180 0 0 0 chr5 178609210 178609230 -24476302 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 393 269 121 0 chr5 178609230 178609302 -24476230 + L1ME LINE L1 5584 5685 -436 1393 160 0 32 chr5 178609394 178609676 -24475856 - L1MA3 LINE L1 -1 6304 6032 356 191 15 0 chr5 178609823 178609891 -24475641 + MLT1K LTR MaLR 143 211 -377 231 36 0 0 chr5 178611138 178611166 -24474366 + (GA)n Simple_repeat Simple_repeat 2 29 0 2095 203 144 37 chr5 178611329 178611925 -24473607 + MLT2F LTR ERVL 4 663 0 428 383 25 25 chr5 178612168 178612411 -24473121 + L2 LINE L2 2816 3058 -255 353 297 0 0 chr5 178612441 178612542 -24472990 + MER117 DNA MER1_type 55 155 -42 235 294 0 47 chr5 178612949 178613034 -24472498 + MIR SINE MIR 58 138 -70 298 282 0 13 chr5 178613983 178614061 -24471471 - MIR SINE MIR -70 192 116 1016 187 20 15 chr5 178614085 178614288 -24471244 - MER20 DNA MER1_type 0 219 16 206 250 58 0 chr5 178614702 178614754 -24470778 + MIR SINE MIR 93 147 -61 270 0 0 0 chr5 178614824 178614854 -24470678 + (TG)n Simple_repeat Simple_repeat 2 31 0 431 205 24 0 chr5 178614929 178615012 -24470520 - MIR SINE MIR -10 252 168 23 54 0 0 chr5 178615405 178615442 -24470090 + AT_rich Low_complexity Low_complexity 1 37 0 391 212 8 25 chr5 178615740 178615858 -24469674 - Charlie7 DNA MER1_type 0 2612 2497 1264 247 50 62 chr5 178616102 178616587 -24468945 - MLT1H LTR MaLR 0 549 71 291 308 0 0 chr5 178616613 178616691 -24468841 - MIR SINE MIR -79 183 106 241 208 0 0 chr5 178616714 178616762 -24468770 - MIR SINE MIR -103 159 112 1087 169 0 11 chr5 178616956 178617133 -24468399 - FRAM SINE Alu -2 174 1 239 232 0 42 chr5 178617162 178617257 -24468275 - Charlie7 DNA MER1_type -3 2609 2519 378 239 29 43 chr5 178617284 178617422 -24468110 - Charlie7 DNA MER1_type -2475 137 2 437 293 98 11 chr5 178617623 178617797 -24467735 + MIR SINE MIR 71 259 -3 261 364 41 0 chr5 178617798 178617919 -24467613 + MER117 DNA MER1_type 25 150 -47 245 208 21 0 chr5 178618208 178618256 -24467276 - MIR3 SINE MIR -45 163 115 22 0 0 0 chr5 178618261 178618283 -24467249 + AT_rich Low_complexity Low_complexity 1 22 0 2128 123 3 0 chr5 178618355 178618648 -24466884 - AluSg SINE Alu -16 294 1 1571 277 74 32 chr5 178619442 178620413 -24465119 + L1MEd LINE L1 585 1638 -4758 2103 130 0 37 chr5 178620413 178620735 -24464797 + AluSx SINE Alu 1 310 -2 1571 277 74 32 chr5 178620735 178620767 -24464765 + L1MEd LINE L1 1638 1667 -4729 595 292 49 57 chr5 178620920 178622005 -24463527 + L1MEd LINE L1 2187 3213 -3002 541 276 132 13 chr5 178622471 178622699 -24462833 - MIR SINE MIR -6 256 2 329 276 98 31 chr5 178623638 178623801 -24461731 - MIR SINE MIR -8 254 81 233 270 0 16 chr5 178624704 178624767 -24460765 - L2 LINE L2 -8 3305 3244 305 282 0 0 chr5 178624990 178625068 -24460464 + MER117 DNA MER1_type 119 196 -1 203 182 0 0 chr5 178625265 178625298 -24460234 - MIR SINE MIR -113 149 117 1322 228 27 48 chr5 178625710 178626083 -24459449 - MLT1A1 LTR MaLR 0 365 1 264 338 0 0 chr5 178626211 178626282 -24459250 - L2 LINE L2 -2 3270 3200 227 178 0 0 chr5 178627772 178627817 -24457715 + C-rich Low_complexity Low_complexity 3 47 0 457 231 111 84 chr5 178628565 178628686 -24456846 - MIR SINE MIR -17 245 114 571 254 50 20 chr5 178628686 178628887 -24456645 - MER63A DNA MER1_type -2 208 2 457 231 111 84 chr5 178628887 178628990 -24456542 - MIR SINE MIR -148 114 15 2406 91 0 0 chr5 178629100 178629407 -24456125 - AluY SINE Alu -4 307 1 2260 131 0 0 chr5 178629449 178629755 -24455777 - AluSq SINE Alu -7 306 1 306 193 167 18 chr5 178629772 178629886 -24455646 - L1ME4a LINE L1 0 6121 5991 246 77 19 39 chr5 178632604 178632656 -24452876 + (TTTCC)n Simple_repeat Simple_repeat 4 54 0 224 269 13 39 chr5 178632656 178632734 -24452798 + CT-rich Low_complexity Low_complexity 3 78 0 341 404 0 0 chr5 178633074 178633168 -24452364 + A-rich Low_complexity Low_complexity 1 94 0 26 0 0 0 chr5 178633168 178633194 -24452338 + AT_rich Low_complexity Low_complexity 1 26 0 1257 77 0 17 chr5 178633260 178633352 -24452180 + (TCCC)n Simple_repeat Simple_repeat 1 453 0 1257 77 0 17 chr5 178633352 178633721 -24451811 + (TCCC)n Simple_repeat Simple_repeat 1 362 0 391 114 0 42 chr5 178634219 178634328 -24451204 + L1P LINE L1 5220 5317 -829 * 589 162 0 0 chr5 178634323 178634422 -24451110 + L1PA15 LINE L1 6041 6139 -26 186 43 0 0 chr5 178634440 178634463 -24451069 + (A)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr5 178634944 178634965 -24450567 + AT_rich Low_complexity Low_complexity 1 21 0 513 310 130 9 chr5 178635948 178636164 -24449368 + MIR SINE MIR 15 256 -6 204 247 161 0 chr5 178636479 178636560 -24448972 + MIR3 SINE MIR 69 162 -46 191 358 74 0 chr5 178637888 178637969 -24447563 - L2 LINE L2 -31 3241 3155 202 326 76 56 chr5 178638263 178638406 -24447126 + L2 LINE L2 2899 3044 -269 754 274 38 46 chr5 178638406 178638643 -24446889 + MIR SINE MIR 2 236 -26 505 271 21 83 chr5 178638679 178638919 -24446613 + L2 LINE L2 3089 3313 0 195 139 0 0 chr5 178640008 178640044 -24445488 + (TG)n Simple_repeat Simple_repeat 2 37 0 1792 141 48 28 chr5 178640380 178640670 -24444862 + AluJo SINE Alu 1 296 -16 489 185 89 45 chr5 178640698 178640855 -24444677 - L1MC3 LINE L1 0 7785 7622 470 246 127 0 chr5 178640856 178640974 -24444558 - MIR SINE MIR -57 151 19 712 290 4 45 chr5 178641676 178641921 -24443611 + MIR SINE MIR 28 262 0 21 0 0 0 chr5 178642093 178642114 -24443418 + AT_rich Low_complexity Low_complexity 1 21 0 1687 162 37 27 chr5 178642205 178642502 -24443030 + AluJo SINE Alu 1 300 -12 2486 61 0 3 chr5 178642519 178642816 -24442716 - AluY SINE Alu -15 296 1 424 246 182 27 chr5 178642843 178643030 -24442502 - L2 LINE L2 -4 3309 3094 243 0 0 0 chr5 178644189 178644216 -24441316 + (T)n Simple_repeat Simple_repeat 1 27 0 572 301 26 21 chr5 178645649 178645842 -24439690 - MIR SINE MIR -6 256 63 714 325 91 19 chr5 178646531 178647165 -24438367 - L2 LINE L2 0 3313 2636 490 331 42 6 chr5 178647251 178647417 -24438115 - MER5B DNA MER1_type -6 172 1 476 301 62 12 chr5 178647417 178647603 -24437929 - MIR SINE MIR -46 216 19 237 290 20 10 chr5 178648072 178648172 -24437360 + LTR67 LTR ERVL 432 532 -25 538 335 67 29 chr5 178648421 178648914 -24436618 + L2 LINE L2 2660 3236 -36 776 304 15 0 chr5 178648956 178649160 -24436372 - MIR SINE MIR -48 214 8 254 139 0 0 chr5 178649170 178649213 -24436319 + L2 LINE L2 3271 3313 0 299 281 40 31 chr5 178650361 178650725 -24434807 - L1ME4a LINE L1 -104 6017 5639 28 29 0 0 chr5 178650820 178650855 -24434677 + AT_rich Low_complexity Low_complexity 1 35 0 432 250 73 20 chr5 178650930 178651134 -24434398 - L1MC4a LINE L1 -1779 6447 6233 4574 174 26 12 chr5 178651195 178652099 -24433433 - L1MC2 LINE L1 -146 6198 5268 1978 96 0 0 chr5 178652099 178652348 -24433184 - AluSq SINE Alu -63 250 2 4574 174 26 12 chr5 178652348 178652640 -24432892 - L1MC2 LINE L1 -1076 5268 4982 2557 234 56 21 chr5 178652873 178653817 -24431715 - L1MC4a LINE L1 -1068 5496 4520 854 234 4 7 chr5 178653817 178654099 -24431433 + MLT1A1 LTR MaLR 1 365 0 2385 262 39 17 chr5 178654099 178654995 -24430537 - L1MC4a LINE L1 -2040 4524 3609 32 0 0 0 chr5 178655104 178655136 -24430396 + AT_rich Low_complexity Low_complexity 1 32 0 371 217 50 8 chr5 178655787 178655907 -24429625 - L1MC4a LINE L1 -3059 3505 3381 * 10600 209 35 19 chr5 178655901 178658675 -24426857 - L1PA15 LINE L1 0 6816 4088 255 31 0 0 chr5 178658675 178658707 -24426825 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 10600 209 35 19 chr5 178658707 178661328 -24424204 - L1PA15 LINE L1 -2728 4088 1311 2314 278 30 30 chr5 178661432 178662156 -24423376 - L1PA15 LINE L1 -6063 724 1 3065 219 27 8 chr5 178662164 178663249 -24422283 - L1MCb LINE L1 -3166 3398 2293 297 0 0 0 chr5 178663262 178663295 -24422237 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 159 16 16 chr5 178663297 178663360 -24422172 - L1MCb LINE L1 -4937 1808 1746 3533 224 45 19 chr5 178663420 178663712 -24421820 - L1MCb LINE L1 -4892 1153 870 2094 125 17 0 chr5 178663712 178664001 -24421531 - AluSx SINE Alu -18 294 1 3533 224 45 19 chr5 178664001 178665073 -24420459 - L1MCb LINE L1 -5175 870 46 915 278 31 39 chr5 178665093 178665551 -24419981 - L1MC/D LINE L1 -487 6652 6198 1745 227 67 54 chr5 178665558 178665936 -24419596 - MLT1E LTR MaLR 0 593 204 5305 112 41 41 chr5 178665936 178666896 -24418636 + L1PA15 LINE L1 5204 6163 -2 1745 227 67 54 chr5 178666896 178667072 -24418460 - MLT1E LTR MaLR -389 204 32 295 283 23 23 chr5 178667112 178667294 -24418238 - L1MC/D LINE L1 -754 6187 6005 695 309 66 74 chr5 178667330 178668272 -24417260 - L1MC/D LINE L1 -980 5961 5028 270 289 51 13 chr5 178668274 178668430 -24417102 - L1P LINE L1 -1906 4240 4079 424 281 30 51 chr5 178668626 178668921 -24416611 - L1MC/D LINE L1 -2169 4772 4484 349 221 189 81 chr5 178669173 178669395 -24416137 - L1MC/D LINE L1 -2694 4247 4002 1953 221 50 69 chr5 178669419 178670663 -24414869 + L1MC4 LINE L1 5925 7171 -871 579 269 94 12 chr5 178671790 178671961 -24413571 + MIR SINE MIR 74 258 -4 1747 152 0 31 chr5 178672192 178672481 -24413051 + AluJb SINE Alu 1 280 -32 243 329 76 19 chr5 178672545 178672703 -24412829 + MER5B DNA MER1_type 1 167 -11 22 56 0 0 chr5 178673627 178673663 -24411869 + AT_rich Low_complexity Low_complexity 1 36 0 585 346 16 12 chr5 178674965 178675219 -24410313 + MIR SINE MIR 2 256 -6 2224 100 0 7 chr5 178675387 178675686 -24409846 + AluSc SINE Alu 1 297 -12 38 22 0 0 chr5 178675755 178675800 -24409732 + AT_rich Low_complexity Low_complexity 1 45 0 271 248 122 108 chr5 178675981 178676195 -24409337 - L2 LINE L2 -219 3053 2837 1699 182 20 0 chr5 178677058 178677354 -24408178 - AluJb SINE Alu -6 306 5 3397 225 66 35 chr5 178677580 178678787 -24406745 - L1MC4a LINE L1 -1 7784 6573 405 214 35 3 chr5 178678776 178678900 -24406632 - L1MC4a LINE L1 -1390 6418 6315 * 1108 260 38 45 chr5 178678903 178680055 -24405477 - L1MCc LINE L1 -4662 2460 1121 372 208 10 21 chr5 178680532 178680628 -24404904 + MER94 DNA DNA 36 130 -4 207 235 0 0 chr5 178680741 178680792 -24404740 + L2 LINE L2 3262 3312 -1 237 139 0 0 chr5 178680898 178680941 -24404591 + (CA)n Simple_repeat Simple_repeat 1 43 0 181 296 0 0 chr5 178681314 178681358 -24404174 - L3 LINE CR1 -1 1576 1533 21 57 0 0 chr5 178681580 178681615 -24403917 + AT_rich Low_complexity Low_complexity 1 35 0 334 363 124 25 chr5 178681690 178681830 -24403702 - L3 LINE CR1 -18 1559 1392 2299 74 3 26 chr5 178681830 178682140 -24403392 - AluY SINE Alu -8 303 1 334 363 124 25 chr5 178682140 178682200 -24403332 - L3 LINE CR1 -185 1392 1339 822 277 0 19 chr5 178682637 178682843 -24402689 + MIR SINE MIR 3 204 -58 2219 105 0 0 chr5 178684324 178684609 -24400923 - AluSx SINE Alu -27 285 1 186 176 0 0 chr5 178684752 178684786 -24400746 + MIR SINE MIR 120 153 -109 198 300 0 0 chr5 178685840 178685890 -24399642 - L3 LINE CR1 -11 1566 1517 294 143 0 0 chr5 178685890 178685939 -24399593 + (TCCCC)n Simple_repeat Simple_repeat 4 52 0 470 235 31 112 chr5 178685943 178686139 -24399393 + LTR16C LTR ERVL 121 300 -191 238 328 62 16 chr5 178686216 178686344 -24399188 + L2 LINE L2 3138 3271 -1 221 193 0 18 chr5 178686618 178686675 -24398857 + CT-rich Low_complexity Low_complexity 1 56 0 442 298 36 60 chr5 178686683 178686834 -24398698 + MLT1K LTR MaLR 301 445 -143 847 178 81 155 chr5 178686834 178687228 -24398304 - MLT1A1 LTR MaLR 0 365 1 442 298 36 60 chr5 178687228 178687328 -24398204 + MLT1K LTR MaLR 445 546 -42 553 272 73 9 chr5 178688235 178688467 -24397065 - MER102a DNA MER1_type -1 329 83 542 275 24 0 chr5 178688705 178688872 -24396660 - MIR SINE MIR -6 256 86 269 208 128 10 chr5 178689088 178689217 -24396315 + LTR16C LTR ERVL 318 491 0 184 371 0 29 chr5 178689220 178689290 -24396242 - MIR3 SINE MIR -133 75 8 542 311 56 53 chr5 178689684 178690096 -24395436 - Charlie8 DNA MER1_type -1950 467 55 2167 127 0 3 chr5 178690104 178690411 -24395121 + AluSq SINE Alu 3 308 -5 21 0 0 0 chr5 178690849 178690870 -24394662 + AT_rich Low_complexity Low_complexity 1 21 0 740 302 21 13 chr5 178691378 178691613 -24393919 + MIR SINE MIR 10 246 -16 258 317 20 10 chr5 178691767 178691868 -24393664 - MIR SINE MIR -71 137 36 261 321 36 12 chr5 178692240 178692324 -24393208 + MIR3 SINE MIR 86 171 -37 222 118 0 0 chr5 178693153 178693187 -24392345 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 218 222 56 0 chr5 178694254 178694308 -24391224 - MIR SINE MIR 0 262 206 759 293 5 5 chr5 178694371 178694562 -24390970 - MIR SINE MIR -70 192 2 334 337 96 12 chr5 178695260 178695426 -24390106 - L1MB8 LINE L1 -1 6177 5998 1661 171 51 3 chr5 178695427 178695778 -24389754 - L1ME1 LINE L1 -239 5927 5560 1118 225 25 12 chr5 178695775 178696095 -24389437 - L1ME1 LINE L1 -883 5263 4940 * 417 210 30 20 chr5 178696101 178696201 -24389331 - MER39 LTR ERV1 -282 425 325 652 181 125 6 chr5 178696227 178696387 -24389145 - MER39 LTR ERV1 -528 179 1 2161 241 11 5 chr5 178696387 178696951 -24388581 - L1ME1 LINE L1 -1563 4583 4017 180 305 179 11 chr5 178697193 178697288 -24388244 + L2 LINE L2 3162 3272 0 2104 203 22 51 chr5 178697416 178697553 -24387979 + L1ME1 LINE L1 5296 5435 -731 2878 3 0 0 chr5 178697553 178697864 -24387668 + AluYa5 SINE Alu 1 311 0 2104 203 22 51 chr5 178697864 178698311 -24387221 + L1ME1 LINE L1 5435 5863 -303 656 220 75 71 chr5 178698475 178698770 -24386762 + L1ME1 LINE L1 5854 6149 -17 608 304 34 5 chr5 178699309 178699516 -24386016 + MIR SINE MIR 35 247 -15 231 226 85 19 chr5 178700972 178701078 -24384454 + L1ME LINE L1 5706 5818 -303 186 43 0 0 chr5 178701139 178701162 -24384370 + (TG)n Simple_repeat Simple_repeat 2 24 0 234 174 0 0 chr5 178701240 178701286 -24384246 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 654 239 63 6 chr5 178702315 178702474 -24383058 + MLT1E LTR MaLR 8 175 -418 209 178 67 0 chr5 178702502 178702547 -24382985 + CT-rich Low_complexity Low_complexity 3 50 0 1277 211 15 0 chr5 178702567 178702832 -24382700 + MLT1E LTR MaLR 325 593 0 269 295 126 39 chr5 178703120 178703374 -24382158 + L1MC/D LINE L1 5293 5568 -553 330 275 37 9 chr5 178703467 178703576 -24381956 + L1MC/D LINE L1 5711 5822 -1986 216 0 0 0 chr5 178703716 178703740 -24381792 + (TG)n Simple_repeat Simple_repeat 2 25 0 23 78 0 0 chr5 178704154 178704205 -24381327 + AT_rich Low_complexity Low_complexity 1 51 0 233 292 146 39 chr5 178704286 178704416 -24381116 - MIR SINE MIR -64 198 55 552 326 115 40 chr5 178704588 178704754 -24380778 - L2 LINE L2 -20 3293 3141 1965 109 7 0 chr5 178704754 178705028 -24380504 - AluSx SINE Alu -1 311 36 552 326 115 40 chr5 178705028 178705697 -24379835 - L2 LINE L2 -172 3141 2393 534 291 252 9 chr5 178705801 178706138 -24379394 + L2 LINE L2 2853 3271 -1 318 284 20 20 chr5 178707007 178707109 -24378423 - MIR SINE MIR -50 212 111 383 294 20 10 chr5 178707234 178707336 -24378196 + MIR SINE MIR 27 129 -133 1352 249 116 39 chr5 178707349 178707807 -24377725 - MLT1H LTR MaLR -13 536 44 342 303 9 9 chr5 178707867 178707976 -24377556 + MIR SINE MIR 127 235 -27 26 64 0 0 chr5 178708888 178708935 -24376597 + AT_rich Low_complexity Low_complexity 1 47 0 731 237 84 80 chr5 178709050 178709297 -24376235 + MLT1J LTR MaLR 100 345 -270 851 281 71 35 chr5 178709297 178709692 -24375840 - MLT1I LTR MaLR 0 409 1 731 237 84 80 chr5 178709692 178709852 -24375680 + MLT1J LTR MaLR 345 610 -5 2498 130 22 8 chr5 178710395 178710765 -24374767 - THE1C LTR MaLR 0 375 1 485 265 66 13 chr5 178710877 178711028 -24374504 - L1ME4a LINE L1 -238 5883 5725 415 257 0 20 chr5 178711107 178711208 -24374324 - FLAM_A SINE Alu -13 129 31 262 100 0 0 chr5 178711628 178711668 -24373864 + L1PA6 LINE L1 6114 6153 -1 599 208 27 20 chr5 178711827 178711976 -24373556 - MER104 DNA Tc2 -3 177 28 1129 106 168 62 chr5 178712037 178712245 -24373287 + MER30 DNA MER1_type 1 230 0 193 241 241 27 chr5 178712374 178712486 -24373046 - MIR SINE MIR -57 151 16 224 355 0 13 chr5 178712597 178712673 -24372859 - MIR SINE MIR -114 94 20 548 286 28 28 chr5 178712711 178712893 -24372639 - MER5A DNA MER1_type -7 182 1 218 239 57 23 chr5 178713762 178713850 -24371682 + L2 LINE L2 2609 2699 -615 1304 199 64 0 chr5 178713920 178714216 -24371316 + MER33 DNA MER1_type 8 322 -2 2210 150 60 34 chr5 178714428 178714946 -24370586 - MLT2A2 LTR ERVL 0 554 1 318 257 14 0 chr5 178715084 178715158 -24370374 + L2 LINE L2 3137 3211 -61 271 354 0 0 chr5 178715198 178715277 -24370255 - MIR SINE MIR -63 145 67 570 285 128 37 chr5 178715934 178716443 -24369089 - L1ME4a LINE L1 -1 6120 5566 924 231 84 5 chr5 178717645 178717848 -24367684 - MER58A DNA MER1_type -5 219 1 258 311 27 0 chr5 178718636 178718710 -24366822 - MIR SINE MIR -70 192 117 186 266 51 25 chr5 178719257 178719336 -24366196 - MIR3 SINE MIR -9 199 119 314 337 163 5 chr5 178719378 178719574 -24365958 - MIR SINE MIR -3 259 33 2121 209 25 25 chr5 178719640 178720110 -24365422 + L1MC3 LINE L1 7310 7779 -6 225 278 139 21 chr5 178720491 178720678 -24364854 - L2 LINE L2 -936 2378 2170 912 235 59 59 chr5 178720882 178721294 -24364238 - L2 LINE L2 -18 3295 35 611 235 34 7 chr5 178721604 178721753 -24363779 + MER103 DNA DNA 11 163 -3 308 310 0 0 chr5 178721827 178721898 -24363634 + MIR SINE MIR 83 153 -55 1436 261 29 26 chr5 178721923 178722341 -24363191 + L3 LINE CR1 607 1025 -552 306 313 67 56 chr5 178722456 178722635 -24362897 + L3 LINE CR1 1312 1492 -85 1999 85 92 11 chr5 178723282 178723565 -24361967 + AluY SINE Alu 1 306 -5 534 255 114 22 chr5 178724112 178724296 -24361236 - MER113 DNA MER1_type? -45 476 276 556 248 22 0 chr5 178724301 178724438 -24361094 + MIR SINE MIR 113 252 -10 344 256 167 39 chr5 178724557 178724713 -24360819 + MER5B DNA MER1_type 3 178 0 292 281 86 16 chr5 178725521 178725649 -24359883 + MIR SINE MIR 100 236 -26 314 366 136 5 chr5 178726429 178726650 -24358882 + MIR SINE MIR 13 262 0 336 257 29 67 chr5 178726945 178727050 -24358482 - MIR SINE MIR -63 145 45 587 112 10 0 chr5 178728399 178728497 -24357035 + (TAGA)n Simple_repeat Simple_repeat 3 101 0 184 371 14 0 chr5 178729575 178729645 -24355887 - MIR SINE MIR -87 121 51 1939 157 7 0 chr5 178729662 178729956 -24355576 + AluSx SINE Alu 5 300 -12 257 222 39 50 chr5 178730765 178730912 -24354620 - HsTC2 DNA Tc2 -34 1864 1 738 82 10 0 chr5 178731529 178731626 -24353906 + THE1B LTR MaLR 1 98 -266 327 303 28 64 chr5 178731873 178732091 -24353441 + L1MC4 LINE L1 5714 5923 -1885 206 406 0 13 chr5 178733305 178733460 -24352072 + MIR SINE MIR 41 193 -69 184 300 67 0 chr5 178733606 178733666 -24351866 - L2 LINE L2 -4 3309 3246 2545 52 3 0 chr5 178733754 178734059 -24351473 + AluY SINE Alu 1 306 -5 26 50 0 0 chr5 178734095 178734135 -24351397 + AT_rich Low_complexity Low_complexity 1 40 0 344 186 0 0 chr5 178734444 178734503 -24351029 - L2 LINE L2 -1 3312 3254 606 199 107 87 chr5 178734659 178734865 -24350667 + MER63A DNA MER1_type 1 210 0 449 245 110 68 chr5 178735103 178735266 -24350266 + MER5B DNA MER1_type 9 178 0 180 111 0 0 chr5 178735397 178735424 -24350108 + (T)n Simple_repeat Simple_repeat 1 27 0 199 372 24 30 chr5 178735851 178736015 -24349517 - MIR SINE MIR -41 221 59 2077 125 0 10 chr5 178736167 178736470 -24349062 + AluSq SINE Alu 2 301 -12 314 131 82 0 chr5 178736531 178736653 -24348879 + (TA)n Simple_repeat Simple_repeat 1 132 0 348 277 77 23 chr5 178736655 178736785 -24348747 + L1MC4 LINE L1 6615 6751 -1291 188 331 179 46 chr5 178737879 178738208 -24347324 + L3 LINE CR1 92 464 -1113 2725 145 0 48 chr5 178738211 178738494 -24347038 + MSTC LTR MaLR 9 265 -163 1784 102 8 8 chr5 178738494 178738738 -24346794 + AluSq SINE Alu 59 302 -11 2725 145 0 48 chr5 178738738 178738895 -24346637 + MSTC LTR MaLR 265 428 0 301 336 98 0 chr5 178738917 178739060 -24346472 + L3 LINE CR1 578 734 -843 242 86 0 0 chr5 178739579 178739614 -24345918 + Alu SINE Alu 1 35 -265 261 345 178 5 chr5 178739951 178740148 -24345384 + L3 LINE CR1 1332 1562 -15 273 29 0 0 chr5 178740153 178740187 -24345345 + (CA)n Simple_repeat Simple_repeat 2 35 0 456 245 27 41 chr5 178740927 178741074 -24344458 - MIR SINE MIR 0 262 118 323 299 13 0 chr5 178741702 178741779 -24343753 + MIR SINE MIR 50 127 -135 947 144 0 13 chr5 178741786 178741939 -24343593 + AluSg/x SINE Alu 119 269 -41 34660 70 2 2 chr5 178742039 178746493 -24339039 - L1P LINE L1 -1692 4454 1 14739 134 18 22 chr5 178746490 178748884 -24336648 - L1P LINE L1 -3753 2393 11 * 789 288 84 66 chr5 178748996 178749544 -24335988 + MLT1K LTR MaLR 16 573 -15 446 200 80 0 chr5 178750126 178750226 -24335306 + MER81 DNA DNA 7 114 0 704 229 23 23 chr5 178750750 178750925 -24334607 + MER5B DNA MER1_type 4 178 0 2424 87 0 3 chr5 178751614 178751924 -24333608 + AluY SINE Alu 1 309 -2 190 300 93 21 chr5 178752583 178752723 -24332809 + L2 LINE L2 2815 2964 -308 2624 53 0 0 chr5 178753470 178753773 -24331759 + AluY SINE Alu 1 303 -8 387 282 80 36 chr5 178753856 178754042 -24331490 - MIR SINE MIR -34 228 34 475 335 106 9 chr5 178754074 178754292 -24331240 + MIR SINE MIR 20 258 -4 213 343 142 8 chr5 178755337 178755471 -24330061 - L2 LINE L2 -15 3257 3106 546 302 75 27 chr5 178755776 178756110 -24329422 - L1ME4a LINE L1 -202 5919 5570 2167 121 6 10 chr5 178756396 178756709 -24328823 - AluSx SINE Alu 0 312 1 195 129 0 0 chr5 178757433 178757464 -24328068 + (GA)n Simple_repeat Simple_repeat 2 32 0 317 249 0 12 chr5 178758020 178758196 -24327336 + CT-rich Low_complexity Low_complexity 1 173 0 327 306 24 32 chr5 178758450 178758574 -24326958 - L2 LINE L2 -1 3271 3149 231 238 95 24 chr5 178758766 178758850 -24326682 + MLT1K LTR MaLR 197 286 -302 374 57 19 0 chr5 178758857 178758910 -24326622 + (TC)n Simple_repeat Simple_repeat 1 54 0 23 33 0 0 chr5 178759253 178759283 -24326249 + AT_rich Low_complexity Low_complexity 1 30 0 308 228 76 0 chr5 178760181 178760260 -24325272 - HsTC2 DNA Tc2 -17 1881 1797 313 109 156 0 chr5 178760671 178760735 -24324797 - HsTC2 DNA Tc2 -1824 74 1 207 0 0 0 chr5 178760804 178760827 -24324705 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 331 276 264 12 chr5 178761005 178761259 -24324273 + L2 LINE L2 2362 2679 -635 1037 131 6 0 chr5 178761267 178761443 -24324089 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 365 281 42 0 chr5 178761451 178761547 -24323985 - L2 LINE L2 -14 3299 3200 390 217 16 38 chr5 178761957 178762141 -24323391 + (TA)n Simple_repeat Simple_repeat 1 180 0 469 235 52 0 chr5 178762634 178762749 -24322783 + L2 LINE L2 3188 3308 -5 253 178 0 0 chr5 178762765 178762810 -24322722 - MER117 DNA MER1_type -152 45 1 240 244 244 30 chr5 178763327 178763462 -24322070 - L2 LINE L2 0 3313 3150 501 243 152 40 chr5 178763484 178763780 -24321752 - L2 LINE L2 -1436 1878 1550 350 293 46 63 chr5 178764983 178765222 -24320310 + L3 LINE CR1 1334 1568 -9 2436 70 0 19 chr5 178766368 178766681 -24318851 - AluY SINE Alu -4 307 1 1805 204 96 3 chr5 178766764 178767127 -24318405 - MLT2C1 LTR ERVL 0 397 1 560 307 78 68 chr5 178767192 178767892 -24317640 + L2 LINE L2 2564 3268 -4 328 296 121 15 chr5 178768209 178768408 -24317124 + MER102b DNA MER1_type 97 316 -25 305 203 16 16 chr5 178771762 178771826 -24313706 - LTR67 LTR ERVL -4 553 490 507 33 0 0 chr5 178774139 178774200 -24311332 + (CA)n Simple_repeat Simple_repeat 2 62 0 358 295 33 8 chr5 178775013 178775135 -24310397 + MER113 DNA MER1_type? 394 518 -3 948 185 12 0 chr5 178775914 178776076 -24309456 + MER5A DNA MER1_type 26 189 0 423 286 109 42 chr5 178776983 178777175 -24308357 - MIR SINE MIR -42 220 16 262 259 107 30 chr5 178778078 178778209 -24307323 - MIR SINE MIR -24 238 98 5767 53 4 1 chr5 178778263 178778940 -24306592 - L1PA7 LINE L1 0 6154 5476 882 246 9 53 chr5 178778947 178779175 -24306357 - MER58A DNA MER1_type 0 224 7 690 260 113 17 chr5 178779189 178779481 -24306051 - MER5C DNA MER1_type 0 324 5 472 282 132 52 chr5 178779526 178779876 -24305656 - MLT1L LTR MaLR -101 479 122 183 349 114 45 chr5 178780180 178780312 -24305220 - MIR3 SINE MIR -66 142 2 392 256 0 35 chr5 178780471 178780612 -24304920 + MER81 DNA DNA 4 114 0 192 255 36 146 chr5 178780948 178781140 -24304392 + MER5A DNA MER1_type 1 171 -18 238 241 37 0 chr5 178781251 178781305 -24304227 + CT-rich Low_complexity Low_complexity 3 58 0 424 326 118 5 chr5 178784581 178784768 -24300764 + MIR SINE MIR 55 262 0 362 255 0 21 chr5 178785772 178785786 -24299746 - L1MC4 LINE L1 -1337 6705 6692 2424 66 0 3 chr5 178785786 178786075 -24299457 + AluY SINE Alu 1 288 -23 362 255 0 21 chr5 178786075 178786154 -24299378 - L1MC4 LINE L1 -1350 6692 6614 * 382 256 0 0 chr5 178786078 178786168 -24299364 + L1MC4 LINE L1 6614 6703 -1339 351 289 0 0 chr5 178786182 178786272 -24299260 + L1MC4 LINE L1 6614 6703 -1339 235 233 0 0 chr5 178786273 178786316 -24299216 + (TATG)n Simple_repeat Simple_repeat 4 46 0 559 309 32 18 chr5 178786423 178786643 -24298889 - MIR SINE MIR -24 238 16 220 296 0 0 chr5 178787724 178787778 -24297754 + L2 LINE L2 3181 3234 -38 24 53 0 0 chr5 178788504 178788542 -24296990 + AT_rich Low_complexity Low_complexity 1 38 0 246 379 0 0 chr5 178788772 178788859 -24296673 + MIR SINE MIR 42 128 -80 319 304 158 13 chr5 178788900 178789058 -24296474 + MIR SINE MIR 3 183 -79 1908 194 40 3 chr5 178789289 178789646 -24295886 - MSTB1 LTR MaLR 0 419 63 468 307 0 0 chr5 178789957 178790071 -24295461 + MER81 DNA DNA 1 114 0 1209 288 80 37 chr5 178790477 178791473 -24294059 + L1MCc LINE L1 1301 2549 -4573 276 233 48 19 chr5 178791474 178791577 -24293955 + L1MCc LINE L1 2588 2693 -4429 356 318 78 33 chr5 178791598 178791840 -24293692 + L1MCc LINE L1 2746 2998 -4124 345 285 15 8 chr5 178791865 178791995 -24293537 + L1MCc LINE L1 3002 3132 -3809 1089 223 27 65 chr5 178791995 178792287 -24293245 - MLT1A1 LTR MaLR 0 365 85 280 229 0 83 chr5 178792395 178792504 -24293028 - MER113 DNA MER1_type? -254 267 168 393 210 24 48 chr5 178792617 178792741 -24292791 - MIR SINE MIR -70 138 18 279 93 0 0 chr5 178794291 178794334 -24291198 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 358 245 149 0 chr5 178794335 178794429 -24291103 - L2 LINE L2 -12 3301 3194 923 203 17 11 chr5 178794436 178794613 -24290919 - MER45A DNA AcHobo 0 178 1 299 246 228 11 chr5 178795583 178795783 -24289749 + MIR SINE MIR 19 262 0 248 309 21 21 chr5 178796099 178796193 -24289339 - MIR SINE MIR -106 156 63 534 274 17 45 chr5 178796560 178796739 -24288793 + MIR SINE MIR 31 204 -58 309 248 115 26 chr5 178797134 178797247 -24288285 + L2 LINE L2 3137 3259 -13 709 269 114 26 chr5 178797424 178797766 -24287766 - L2 LINE L2 -1 3312 2941 23 0 0 0 chr5 178799075 178799098 -24286434 + AT_rich Low_complexity Low_complexity 1 23 0 841 197 0 0 chr5 178799098 178799225 -24286307 - FLAM_C SINE Alu -14 129 3 1961 141 7 10 chr5 178799325 178799631 -24285901 - AluJb SINE Alu -7 305 1 348 190 0 0 chr5 178799647 178799726 -24285806 + CT-rich Low_complexity Low_complexity 4 82 0 246 316 103 17 chr5 178799935 178800052 -24285480 + L2 LINE L2 3146 3272 0 1770 199 120 33 chr5 178800581 178801038 -24284494 - MLT1D LTR MaLR 0 505 9 25 31 0 0 chr5 178801083 178801115 -24284417 + AT_rich Low_complexity Low_complexity 1 32 0 1983 149 7 0 chr5 178801168 178801480 -24284052 + AluSx SINE Alu 1 314 0 538 283 76 5 chr5 178801661 178801845 -24283687 - L1ME3 LINE L1 0 6162 5966 870 216 6 6 chr5 178801853 178802034 -24283498 - L1ME3 LINE L1 -326 5836 5656 361 257 0 48 chr5 178803163 178803268 -24282264 + L2 LINE L2 3210 3309 -4 2134 122 7 0 chr5 178803615 178803911 -24281621 - AluSx SINE Alu -12 300 3 251 143 0 0 chr5 178804018 178804060 -24281472 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 6765 129 13 7 chr5 178806432 178807433 -24278099 + THE1B-int LTR MaLR 574 1580 0 2743 110 6 3 chr5 178807433 178807796 -24277736 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr5 178808509 178808531 -24277001 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 178808903 178808932 -24276600 + AT_rich Low_complexity Low_complexity 1 29 0 407 368 11 11 chr5 178809482 178809672 -24275860 + MIR SINE MIR 3 192 -70 2269 236 24 45 chr5 178809945 178810607 -24274925 - L1ME2 LINE L1 -91 6142 5495 859 210 34 119 chr5 178810626 178810866 -24274666 - L1ME2 LINE L1 -3874 2522 2344 1975 148 0 0 chr5 178810866 178811177 -24274355 - AluY SINE Alu 0 311 1 859 210 34 119 chr5 178811177 178811431 -24274101 - L1ME2 LINE L1 -4052 2344 2070 2517 253 61 42 chr5 178811446 178812316 -24273216 + L2 LINE L2 1932 2817 -497 460 260 76 36 chr5 178812317 178812540 -24272992 + L2 LINE L2 2984 3215 -98 22 0 0 0 chr5 178812676 178812698 -24272834 + AT_rich Low_complexity Low_complexity 1 22 0 1237 124 5 0 chr5 178812698 178812891 -24272641 - L1MA4 LINE L1 -6 6294 6101 1394 158 11 34 chr5 178812892 178813158 -24272374 - L1MA4 LINE L1 -144 6156 5897 201 74 0 0 chr5 178813158 178813185 -24272347 + (TATG)n Simple_repeat Simple_repeat 2 28 0 477 276 40 13 chr5 178815978 178816130 -24269402 + L1ME LINE L1 47 202 -5868 662 298 18 57 chr5 178816541 178816760 -24268772 + L3 LINE CR1 801 1008 -569 923 237 14 24 chr5 178816760 178816971 -24268561 - MER3 DNA MER1_type 0 209 1 662 298 18 57 chr5 178816971 178817030 -24268502 + L3 LINE CR1 1008 1068 -509 286 339 31 15 chr5 178817034 178817164 -24268368 + MLT1K LTR MaLR 2 133 -455 241 329 94 6 chr5 178817278 178817448 -24268084 + MLT1K LTR MaLR 369 553 -35 552 236 11 107 chr5 178818266 178818336 -24267196 - MER5B DNA MER1_type 0 178 103 3232 161 23 7 chr5 178818336 178818909 -24266623 + L1MB4 LINE L1 5599 6180 0 552 236 11 107 chr5 178818909 178819016 -24266516 - MER5B DNA MER1_type -75 103 18 516 312 50 28 chr5 178819018 178819300 -24266232 - MER102b DNA MER1_type -18 323 36 243 213 0 0 chr5 178819393 178819440 -24266092 - MER81 DNA DNA -67 47 1 1010 234 132 43 chr5 178820030 178820401 -24265131 + MLT1I LTR MaLR 2 405 -4 1096 206 0 19 chr5 178820593 178820802 -24264730 + MER3 DNA MER1_type 5 209 0 1626 163 29 7 chr5 178822066 178822372 -24263160 - L1MB4 LINE L1 -107 6073 5761 * 2186 190 20 29 chr5 178822362 178822872 -24262660 - L1MB4 LINE L1 -816 5330 4826 272 161 23 69 chr5 178823150 178823237 -24262295 - L1ME LINE L1 -240 5881 5799 187 212 0 0 chr5 178823358 178823391 -24262141 + L2 LINE L2 3230 3262 -10 197 93 74 0 chr5 178824644 178824698 -24260834 + (TA)n Simple_repeat Simple_repeat 2 59 0 277 288 20 75 chr5 178825123 178825269 -24260263 + L3 LINE CR1 1426 1563 -14 395 198 44 55 chr5 178826017 178826108 -24259424 - MER91A DNA MER1_type -1 195 106 400 290 191 8 chr5 178826113 178826244 -24259288 - MER91A DNA MER1_type -22 174 20 540 282 59 18 chr5 178826319 178826489 -24259043 - MER5A DNA MER1_type -6 183 7 1916 144 18 0 chr5 178827376 178827660 -24257872 + AluSq SINE Alu 1 289 -24 350 293 140 31 chr5 178828312 178828534 -24256998 + MIR SINE MIR 1 246 -16 1090 214 5 0 chr5 178828599 178828791 -24256741 - MER58A DNA MER1_type -1 223 31 907 309 32 25 chr5 178829465 178829866 -24255666 - MLT1K LTR MaLR -17 571 168 204 125 0 0 chr5 178830560 178830592 -24254940 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 234 0 0 0 chr5 178830594 178830620 -24254912 + (TG)n Simple_repeat Simple_repeat 2 27 0 2270 90 3 0 chr5 178830784 178831074 -24254458 + AluY SINE Alu 1 291 -20 467 244 70 19 chr5 178831170 178831326 -24254206 + MER103 DNA DNA 2 165 -1 258 81 0 0 chr5 178831357 178831394 -24254138 + (CA)n Simple_repeat Simple_repeat 2 38 0 710 235 84 50 chr5 178831645 178831883 -24253649 + MLT1L LTR MaLR 2 247 -368 * 1914 227 13 16 chr5 178831856 178832239 -24253293 + MLT1G LTR MaLR 209 590 0 403 267 117 0 chr5 178832959 178833079 -24252453 - L2 LINE L2 0 3313 3180 369 43 0 0 chr5 178833318 178833365 -24252167 + (TG)n Simple_repeat Simple_repeat 1 47 0 854 324 66 32 chr5 178833503 178833913 -24251619 + MLT1K LTR MaLR 3 426 -162 180 259 185 0 chr5 178833993 178834047 -24251485 - L3 LINE CR1 -1234 343 280 1126 139 16 21 chr5 178835512 178835631 -24249901 + L1PA15 LINE L1 5958 6077 -88 1547 117 49 18 chr5 178835631 178835854 -24249678 - MER30 DNA MER1_type 0 230 1 1126 139 16 21 chr5 178835854 178835921 -24249611 + L1PA15 LINE L1 6077 6143 -22 387 0 0 0 chr5 178835921 178835964 -24249568 + (TA)n Simple_repeat Simple_repeat 2 44 0 2582 49 3 3 chr5 178836584 178836891 -24248641 + AluY SINE Alu 1 307 -4 261 294 67 124 chr5 178837050 178837162 -24248370 - L2 LINE L2 -215 3057 2940 766 261 50 0 chr5 178837162 178837342 -24248190 + MER5A DNA MER1_type 1 189 0 1070 164 22 58 chr5 178837349 178837575 -24247957 - MER20 DNA MER1_type 0 219 2 261 294 67 124 chr5 178837575 178837818 -24247714 - L2 LINE L2 -338 2934 2717 2240 137 14 22 chr5 178837883 178838248 -24247284 - Tigger2 DNA MER2_type 0 2718 2357 2122 80 29 4 chr5 178838467 178838741 -24246791 + AluSp SINE Alu 1 281 -32 351 98 0 0 chr5 178838741 178838802 -24246730 + (TG)n Simple_repeat Simple_repeat 2 62 0 280 315 169 22 chr5 178839321 178839505 -24246027 - MIR SINE MIR -13 249 39 236 167 0 19 chr5 178839515 178839569 -24245963 + CT-rich Low_complexity Low_complexity 2 54 0 300 91 0 0 chr5 178839816 178839860 -24245672 + (ATG)n Simple_repeat Simple_repeat 2 45 0 510 307 58 19 chr5 178839860 178840065 -24245467 - MIR SINE MIR -3 259 47 330 301 135 13 chr5 178840260 178840416 -24245116 - MIR SINE MIR -2 260 86 214 290 0 0 chr5 178841141 178841203 -24244329 + L2 LINE L2 3163 3224 -89 500 293 165 7 chr5 178841383 178841601 -24243931 + MIR SINE MIR 11 262 0 2776 188 16 77 chr5 178841617 178842225 -24243307 - MER90 LTR ERV1 -2 573 3 510 315 27 31 chr5 178842243 178842382 -24243150 - MIR SINE MIR 0 262 120 2748 144 31 5 chr5 178842382 178842799 -24242733 + MSTA LTR MaLR 1 428 0 510 315 27 31 chr5 178842799 178842909 -24242623 - MIR SINE MIR -142 120 11 717 322 63 47 chr5 178843100 178843664 -24241868 - L2 LINE L2 0 3313 2722 7669 55 3 0 chr5 178844577 178846204 -24239328 - L1PA6 LINE L1 -10 6144 4515 686 323 25 16 chr5 178846375 178846697 -24238835 + L2 LINE L2 2986 3310 -3 252 86 0 0 chr5 178847629 178847664 -24237868 + (A)n Simple_repeat Simple_repeat 1 35 0 268 238 16 66 chr5 178847697 178847819 -24237713 + CT-rich Low_complexity Low_complexity 4 119 0 502 194 10 10 chr5 178848480 178848578 -24236954 + MER69 DNA AcHobo 2429 2526 0 386 239 58 29 chr5 178848809 178848947 -24236585 - L1ME3 LINE L1 -1 6161 6020 551 299 34 34 chr5 178850059 178850266 -24235266 + MIR SINE MIR 11 217 -45 1664 169 3 29 chr5 178850697 178851004 -24234528 - AluJo SINE Alu 0 312 14 670 308 67 39 chr5 178852025 178852412 -24233120 + L2 LINE L2 2916 3313 0 380 313 21 7 chr5 178853225 178853369 -24232163 + MIR SINE MIR 117 262 0 551 14 0 14 chr5 178854473 178854542 -24230990 + (TTTTA)n Simple_repeat Simple_repeat 1 68 0 2436 81 0 10 chr5 178854820 178855128 -24230404 + AluSg SINE Alu 1 305 -5 347 244 70 0 chr5 178855344 178855430 -24230102 - Zaphod DNA AcHobo -24 4007 3916 1082 296 141 26 chr5 178855441 178855931 -24229601 - MER115 DNA AcHobo -144 549 4 213 216 68 54 chr5 178856119 178856193 -24229339 + L2 LINE L2 3239 3313 0 2378 70 3 0 chr5 178856430 178856729 -24228803 - AluY SINE Alu -11 300 1 880 215 113 11 chr5 178856750 178856936 -24228596 - MER20 DNA MER1_type 0 219 15 23 33 0 0 chr5 178857902 178857932 -24227600 + AT_rich Low_complexity Low_complexity 1 30 0 2014 138 0 0 chr5 178858001 178858327 -24227205 + AluSx SINE Alu 1 326 0 23 0 0 0 chr5 178858356 178858379 -24227153 + AT_rich Low_complexity Low_complexity 1 23 0 253 345 97 0 chr5 178858578 178858691 -24226841 - L2 LINE L2 0 3272 3149 198 329 86 53 chr5 178860044 178860196 -24225336 + MIR SINE MIR 64 220 -42 901 226 32 40 chr5 178860312 178860564 -24224968 - MER113 DNA MER1_type? -73 448 199 1879 147 13 16 chr5 178860578 178860890 -24224642 - AluJb SINE Alu -1 311 1 688 248 25 0 chr5 178860895 178861097 -24224435 - MER113 DNA MER1_type? -307 214 8 356 88 18 0 chr5 178861585 178861642 -24223890 + (TC)n Simple_repeat Simple_repeat 1 58 0 7385 64 3 7 chr5 178862796 178864550 -24220982 - L1PA7 LINE L1 0 6154 4293 484 261 84 0 chr5 178864579 178864721 -24220811 - MIR SINE MIR -69 193 40 345 109 0 0 chr5 178865273 178865328 -24220204 + (CA)n Simple_repeat Simple_repeat 2 56 0 182 319 117 0 chr5 178865730 178865824 -24219708 - MIR SINE MIR -26 236 132 869 171 26 87 chr5 178865864 178866128 -24219404 + Charlie5 DNA MER1_type 2372 2619 0 588 168 0 80 chr5 178866143 178866256 -24219276 + MER58B DNA MER1_type 1 104 -237 215 221 44 59 chr5 178866351 178866419 -24219113 - MIR SINE MIR -186 76 10 183 315 19 0 chr5 178866433 178866487 -24219045 - MIR SINE MIR -27 235 181 279 316 0 2 chr5 178866653 178866728 -24218804 - MIR SINE MIR -95 113 40 836 207 7 0 chr5 178867105 178867255 -24218277 + MER58B DNA MER1_type 190 340 -1 711 240 63 39 chr5 178867907 178868161 -24217371 - MIR SINE MIR -1 261 2 296 294 24 12 chr5 178868264 178868349 -24217183 - L2 LINE L2 0 3272 3187 421 292 86 130 chr5 178869703 178869941 -24215591 + L2 LINE L2 2731 2931 -341 2705 211 28 9 chr5 178869941 178870515 -24215017 - L1MB8 LINE L1 -13 6165 5581 421 292 86 130 chr5 178870515 178870739 -24214793 + L2 LINE L2 2931 3163 -109 332 230 27 0 chr5 178870789 178870863 -24214669 + MLT1F1 LTR MaLR 1 76 -466 489 17 0 0 chr5 178870922 178870980 -24214552 + (TC)n Simple_repeat Simple_repeat 1 58 0 1402 209 31 7 chr5 178870980 178871293 -24214239 + MLT1F1 LTR MaLR 193 559 -8 1418 231 16 54 chr5 178871432 178871818 -24213714 + MLT1A2 LTR MaLR 4 374 0 226 289 36 0 chr5 178871834 178871917 -24213615 - MIR SINE MIR -70 192 107 29 0 0 0 chr5 178872114 178872143 -24213389 + AT_rich Low_complexity Low_complexity 1 29 0 705 117 33 17 chr5 178872143 178872263 -24213269 - L1MB5 LINE L1 0 6174 6053 202 312 28 106 chr5 178872574 178872621 -24212911 + MIR SINE MIR 17 66 -142 1208 226 9 0 chr5 178872621 178872842 -24212690 + MER58A DNA MER1_type 2 224 0 202 312 28 106 chr5 178872842 178872935 -24212597 + MIR SINE MIR 66 146 -62 471 216 52 45 chr5 178873293 178873427 -24212105 + MIR SINE MIR 54 188 -74 249 307 47 20 chr5 178873958 178874108 -24211424 + MIR SINE MIR 28 181 -81 198 254 17 17 chr5 178874112 178874171 -24211361 + L2 LINE L2 3210 3268 -4 287 223 0 17 chr5 178874829 178874927 -24210605 + MLT1J2 LTR MaLR 315 409 0 232 209 0 0 chr5 178875061 178875104 -24210428 - MIR SINE MIR -189 73 31 852 100 0 79 chr5 178875115 178875255 -24210277 - AluSp/q SINE Alu -19 294 166 298 296 0 12 chr5 178875285 178875366 -24210166 - MIR SINE MIR -149 113 34 415 310 75 6 chr5 178875894 178876068 -24209464 - MIR SINE MIR 0 262 77 300 329 60 52 chr5 178876433 178876633 -24208899 + MIR SINE MIR 5 203 -59 473 350 42 13 chr5 178877676 178877913 -24207619 - MIR SINE MIR -6 256 13 363 296 167 41 chr5 178877929 178878606 -24206926 - L2 LINE L2 -2 3311 2535 2329 94 0 0 chr5 178878606 178878892 -24206640 + AluSq SINE Alu 21 306 -7 363 296 167 41 chr5 178878892 178878922 -24206610 - L2 LINE L2 -778 2535 2510 315 183 0 70 chr5 178880143 178880214 -24205318 - MLT1J2 LTR MaLR -23 427 362 410 295 94 7 chr5 178880269 178880418 -24205114 - MLT1J2 LTR MaLR -257 193 32 233 250 17 0 chr5 178880530 178880590 -24204942 + MLT1K LTR MaLR 510 570 -18 218 286 27 18 chr5 178881527 178881639 -24203893 + (TAAA)n Simple_repeat Simple_repeat 2 114 0 498 261 17 8 chr5 178881869 178881988 -24203544 + L2 LINE L2 3193 3312 -1 594 231 58 19 chr5 178882099 178882255 -24203277 + MER117 DNA MER1_type 5 166 -31 1366 240 9 112 chr5 178882671 178883036 -24202496 + MLT1I LTR MaLR 2 403 -6 864 29 0 0 chr5 178883036 178883139 -24202393 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 2242 80 0 0 chr5 178883144 178883418 -24202114 - AluY SINE Alu -37 274 1 1366 240 9 112 chr5 178883418 178883501 -24202031 + MLT1I LTR MaLR 319 409 0 1955 157 43 27 chr5 178884310 178884679 -24200853 + THE1C LTR MaLR 1 375 0 960 209 0 0 chr5 178884783 178884946 -24200586 - MER45A DNA AcHobo -15 163 1 649 232 128 0 chr5 178885958 178886122 -24199410 - MER63A DNA MER1_type 0 210 26 2387 70 0 3 chr5 178886291 178886590 -24198942 + AluY SINE Alu 1 298 -13 206 372 11 11 chr5 178886667 178886761 -24198771 - L2 LINE L2 -42 3230 3137 262 297 0 27 chr5 178886932 178887006 -24198526 + MARNA DNA Mariner 75 146 -440 525 311 14 23 chr5 178887029 178887248 -24198284 - MARNA DNA Mariner -203 383 167 22 0 0 0 chr5 178887528 178887550 -24197982 + AT_rich Low_complexity Low_complexity 1 22 0 243 368 62 14 chr5 178887724 178887868 -24197664 - L2 LINE L2 0 3272 3122 2083 108 0 17 chr5 178887888 178888202 -24197330 - AluY SINE Alu 0 309 1 186 167 0 0 chr5 178888623 178888659 -24196873 + (CA)n Simple_repeat Simple_repeat 1 36 0 282 277 36 36 chr5 178888659 178888771 -24196761 + (CATG)n Simple_repeat Simple_repeat 3 114 0 385 303 72 36 chr5 178889217 178889438 -24196094 + MIR SINE MIR 16 244 -18 975 290 104 32 chr5 178889620 178890152 -24195380 - L2 LINE L2 0 3313 2762 182 259 35 17 chr5 178890362 178890420 -24195112 - L2 LINE L2 -63 3250 3192 1002 221 37 28 chr5 178890423 178890640 -24194892 - MER20 DNA MER1_type 0 219 1 628 229 14 14 chr5 178890761 178890905 -24194627 + MLT1A2 LTR MaLR 1 144 -230 5711 150 24 5 chr5 178891017 178892328 -24193204 - L1M1 LINE L1 -664 7057 5722 2506 87 17 23 chr5 178892344 178892691 -24192841 - L1PB1 LINE L1 -6 6145 5801 2974 97 11 2 chr5 178892695 178893204 -24192328 - L1P LINE L1 -5418 728 2 10884 212 37 12 chr5 178893205 178896059 -24189473 - L1 LINE L1 -1581 4565 1655 4915 191 20 35 chr5 178896055 178897153 -24188379 - L1M1 LINE L1 -2145 5420 4339 * 5791 80 22 55 chr5 178897160 178898278 -24187254 + SVA Other Other 1 866 -520 6395 70 10 58 chr5 178898387 178899435 -24186097 + SVA Other Other 430 1429 0 852 208 6 0 chr5 178899435 178899608 -24185924 - L1M1 LINE L1 -3215 4350 4177 17919 147 58 39 chr5 178899639 178899737 -24185795 - L1M1 LINE L1 -4206 3359 3264 2429 80 0 3 chr5 178899737 178900036 -24185496 + AluSg SINE Alu 1 298 -12 17919 147 58 39 chr5 178900036 178903211 -24182321 - L1M1 LINE L1 -4301 3264 25 242 143 0 0 chr5 178903212 178903247 -24182285 + MER105 DNA DNA 35 69 -135 898 215 11 11 chr5 178903298 178903484 -24182048 - MIR SINE MIR -17 245 60 342 286 163 40 chr5 178903532 178903759 -24181773 + MIR SINE MIR 8 262 0 199 319 14 14 chr5 178903837 178903909 -24181623 + L2 LINE L2 3241 3312 -1 202 128 26 0 chr5 178904967 178905006 -24180526 + (CA)n Simple_repeat Simple_repeat 1 40 0 264 232 316 0 chr5 178905768 178905863 -24179669 - MIR SINE MIR -20 242 118 256 309 135 0 chr5 178908159 178908285 -24177247 - MIR SINE MIR 0 262 120 180 0 0 0 chr5 178908366 178908386 -24177146 + (TA)n Simple_repeat Simple_repeat 1 20 0 3864 85 2 0 chr5 178908386 178908867 -24176665 - L1PA7 LINE L1 -19 6135 5654 660 238 110 26 chr5 178909177 178909404 -24176128 - MIR SINE MIR -10 252 7 1319 266 22 19 chr5 178910206 178910567 -24174965 + MER93a LTR ERV1 37 398 -4 1035 242 0 16 chr5 178910971 178911227 -24174305 + MIR SINE MIR 1 252 -10 231 250 13 53 chr5 178911330 178911406 -24174126 + MIR SINE MIR 12 84 -178 576 291 141 5 chr5 178911453 178911666 -24173866 + MIR SINE MIR 8 249 -13 2415 71 0 29 chr5 178911778 178912087 -24173445 + AluY SINE Alu 2 301 -10 4955 164 12 9 chr5 178912087 178912965 -24172567 - L1MB3 LINE L1 -19 6164 5281 2040 115 3 20 chr5 178913303 178913319 -24172213 + L1MB1 LINE L1 5874 5889 -279 1469 152 68 79 chr5 178913319 178913688 -24171844 - MLT1A1 LTR MaLR 0 365 1 2040 115 3 20 chr5 178913688 178913967 -24171565 + L1MB1 LINE L1 5889 6164 -4 2334 58 44 3 chr5 178914134 178914429 -24171103 - AluY SINE Alu 0 311 1 197 276 83 103 chr5 178915749 178915826 -24169706 + MIR SINE MIR 89 163 -99 596 153 8 57 chr5 178915826 178915950 -24169582 + L1MC1 LINE L1 6216 6333 0 197 276 83 103 chr5 178915950 178916017 -24169515 + MIR SINE MIR 163 230 -32 952 172 13 86 chr5 178916086 178916318 -24169214 - MER20 DNA MER1_type -4 215 1 241 336 52 37 chr5 178916712 178916846 -24168686 - MIR3 SINE MIR -21 187 52 716 209 81 12 chr5 178917086 178917258 -24168274 - MER5A DNA MER1_type -1 188 5 364 304 136 8 chr5 178917266 178917391 -24168141 + MIR SINE MIR 13 153 -109 512 290 57 23 chr5 178919309 178919485 -24166047 + MIR SINE MIR 22 203 -59 227 336 32 96 chr5 178919554 178919679 -24165853 + L2 LINE L2 3150 3266 -6 248 265 104 67 chr5 178920504 178920772 -24164760 - MLT1K LTR MaLR -123 465 188 231 170 64 0 chr5 178921042 178921089 -24164443 - MIR SINE MIR -95 167 118 4334 81 7 0 chr5 178921125 178921716 -24163816 - L1PA13 LINE L1 -3 6160 5566 2361 141 32 35 chr5 178921731 178922165 -24163367 - Tigger2a DNA MER2_type -1 433 1 197 267 0 0 chr5 178922636 178922681 -24162851 - MIR SINE MIR -118 144 100 522 300 44 6 chr5 178923583 178923743 -24161789 + MER5B DNA MER1_type 4 169 -9 503 265 53 12 chr5 178923799 178923969 -24161563 + MIR SINE MIR 34 210 -52 2595 220 41 3 chr5 178924083 178924673 -24160859 + MER90 LTR ERV1 1 612 -2 183 288 150 12 chr5 178924957 178925037 -24160495 - MIR SINE MIR -17 245 155 329 147 53 40 chr5 178926199 178926274 -24159258 - L2 LINE L2 -9 3304 3229 2301 93 0 3 chr5 178928336 178928638 -24156894 - AluY SINE Alu -2 309 9 225 0 0 0 chr5 178929352 178929377 -24156155 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2573 77 0 0 chr5 178929817 178930128 -24155404 + AluY SINE Alu 1 311 0 254 210 65 0 chr5 178930774 178930836 -24154696 + L2 LINE L2 3245 3310 -3 206 415 48 34 chr5 178930849 178930996 -24154536 + L2 LINE L2 3123 3271 -1 4327 107 39 85 chr5 178931297 178932155 -24153377 - L1PA14 LINE L1 -1 6160 5343 2120 111 7 0 chr5 178932162 178932442 -24153090 + AluSx SINE Alu 23 304 -8 993 164 34 0 chr5 178932448 178932656 -24152876 + L1P LINE L1 5129 5343 -803 638 265 97 10 chr5 178933056 178933252 -24152280 + MIR SINE MIR 14 226 -36 1040 179 85 0 chr5 178933338 178933539 -24151993 - MER20 DNA MER1_type -1 218 1 22 0 0 0 chr5 178934474 178934496 -24151036 + AT_rich Low_complexity Low_complexity 1 22 0 652 97 0 0 chr5 178934976 178935069 -24150463 + L1PA10 LINE L1 6066 6158 -10 344 294 50 0 chr5 178936332 178936451 -24149081 - MIR SINE MIR -81 181 57 1647 163 36 39 chr5 178938412 178938718 -24146814 + AluJo SINE Alu 1 305 -7 940 231 5 0 chr5 178940737 178940923 -24144609 - MER5A DNA MER1_type -1 188 2 267 79 0 0 chr5 178942015 178942053 -24143479 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 468 311 39 95 chr5 178942054 178942443 -24143089 - L2 LINE L2 -12 3260 2894 411 291 0 19 chr5 178942420 178942523 -24143009 - MER91A DNA MER1_type -84 112 12 * 1762 305 128 29 chr5 178942533 178943794 -24141738 + L2 LINE L2 1914 3313 0 263 309 178 21 chr5 178944040 178944231 -24141301 + MIR SINE MIR 28 248 -14 210 263 79 13 chr5 178944480 178944556 -24140976 - L2 LINE L2 0 3313 3233 203 393 12 10 chr5 178944707 178944808 -24140724 + MIR SINE MIR 11 113 -95 443 281 36 22 chr5 178946118 178946257 -24139275 + MIR SINE MIR 15 155 -107 420 358 49 28 chr5 178946565 178946889 -24138643 - L2 LINE L2 -435 2879 2549 489 330 54 25 chr5 178947561 178947764 -24137768 - MIR SINE MIR -34 228 20 183 162 0 0 chr5 178948391 178948428 -24137104 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 295 300 85 31 chr5 178948787 178948917 -24136615 + MIR SINE MIR 61 197 -65 279 0 0 0 chr5 178949895 178949926 -24135606 + (CA)n Simple_repeat Simple_repeat 2 32 0 208 125 62 42 chr5 178951046 178951094 -24134438 + (CACCC)n Simple_repeat Simple_repeat 4 52 0 522 300 101 4 chr5 178953034 178953261 -24132271 - MIR SINE MIR -2 260 12 26 82 0 0 chr5 178953944 178954005 -24131527 + AT_rich Low_complexity Low_complexity 1 61 0 440 292 102 27 chr5 178955390 178955722 -24129810 + L1ME4a LINE L1 5751 6107 -14 201 340 58 19 chr5 178956924 178957027 -24128505 + MIR SINE MIR 156 262 0 279 325 86 53 chr5 178957047 178957256 -24128276 + L3 LINE CR1 1011 1226 -351 636 300 126 0 chr5 178957289 178957519 -24128013 - MIR SINE MIR 0 262 4 545 322 101 18 chr5 178957529 178957815 -24127717 + L3 LINE CR1 1257 1566 -11 186 286 0 16 chr5 178958449 178958512 -24127020 + L2 LINE L2 3248 3309 -4 1138 149 17 0 chr5 178958543 178958717 -24126815 + MER5A DNA MER1_type 1 177 -12 548 338 62 48 chr5 178959472 178960219 -24125313 + L2 LINE L2 2551 3307 -6 5337 116 40 1 chr5 178960543 178961929 -24123603 + L1PA13 LINE L1 4736 6163 0 218 244 0 0 chr5 178962579 178962620 -24122912 + L2 LINE L2 3214 3254 -18 675 223 34 17 chr5 178962638 178962813 -24122719 - MER5B DNA MER1_type 0 178 1 21 0 0 0 chr5 178963052 178963073 -24122459 + AT_rich Low_complexity Low_complexity 1 21 0 214 171 0 0 chr5 178963785 178963826 -24121706 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1719 294 56 7 chr5 178963828 178964419 -24121113 + L2 LINE L2 678 1297 -2017 2371 148 39 14 chr5 178964429 178964863 -24120669 + MLT1C LTR MaLR 1 445 -22 3977 242 139 36 chr5 178964871 178965308 -24120224 + L2 LINE L2 1307 1698 -1615 2387 77 0 46 chr5 178965308 178965632 -24119900 - AluY SINE Alu -2 309 1 3977 242 139 36 chr5 178965632 178966828 -24118704 + L2 LINE L2 1698 3106 -207 1220 175 160 52 chr5 178966891 178967234 -24118298 - MLT1B LTR MaLR -10 380 1 374 352 8 0 chr5 178967284 178967412 -24118120 + L2 LINE L2 3185 3313 0 226 293 71 39 chr5 178967464 178967623 -24117909 + MIR SINE MIR 32 204 -58 363 268 41 16 chr5 178967729 178967852 -24117680 - MIR SINE MIR -16 246 121 23 54 0 0 chr5 178968482 178968519 -24117013 + AT_rich Low_complexity Low_complexity 1 37 0 720 308 60 37 chr5 178969405 178969543 -24115989 + L2 LINE L2 2951 3084 -229 1586 202 41 22 chr5 178969543 178969910 -24115622 - MLT1A2 LTR MaLR 0 374 1 720 308 60 37 chr5 178969910 178970122 -24115410 + L2 LINE L2 3084 3309 -4 257 366 11 0 chr5 178970263 178970356 -24115176 - L2 LINE L2 0 3272 3179 298 291 67 97 chr5 178970463 178970731 -24114801 - L2 LINE L2 -346 2968 2709 337 351 79 22 chr5 178971111 178971328 -24114204 + MIR SINE MIR 34 257 -5 202 277 176 8 chr5 178971411 178971530 -24114002 + MIR SINE MIR 124 262 0 195 364 88 19 chr5 178973128 178973436 -24112096 + L2 LINE L2 2641 2969 -345 25 31 0 0 chr5 178973896 178973928 -24111604 + AT_rich Low_complexity Low_complexity 1 32 0 403 292 44 7 chr5 178975360 178975506 -24110026 + MIR SINE MIR 40 189 -68 5646 232 77 33 chr5 178975535 178976667 -24108865 + L1MB7 LINE L1 14 1094 -5552 1891 182 3 10 chr5 178976667 178976980 -24108552 - AluJo SINE Alu -1 311 1 5646 232 77 33 chr5 178976980 178978309 -24107223 + L1MB7 LINE L1 1094 2652 -3994 3139 218 39 8 chr5 178978367 178979239 -24106293 + L1MB7 LINE L1 4768 5666 -978 417 230 0 0 chr5 178979241 178979328 -24106204 - Tigger5 DNA MER2_type 0 2323 2237 282 242 15 0 chr5 178979381 178979447 -24106085 - Tigger5 DNA MER2_type 0 2323 2257 2864 171 60 67 chr5 178979472 178979660 -24105872 + L1MB7 LINE L1 5663 5851 -831 1751 201 0 7 chr5 178979660 178979963 -24105569 + AluJb SINE Alu 1 301 -11 2864 171 60 67 chr5 178979963 178980639 -24104893 + L1MB7 LINE L1 5851 6522 -160 240 211 42 0 chr5 178980656 178980727 -24104805 + (TA)n Simple_repeat Simple_repeat 1 74 0 1577 268 53 42 chr5 178980727 178981654 -24103878 + L1ME3A LINE L1 3488 4424 -2220 881 300 33 69 chr5 178981938 178982388 -24103144 - L2 LINE L2 -542 2772 2339 638 175 13 20 chr5 178982399 178982587 -24102945 + L1ME3A LINE L1 5651 5837 -840 1390 74 53 0 chr5 178982657 178982847 -24102685 - L1PA5 LINE L1 0 6154 5955 429 315 214 6 chr5 178982848 178983175 -24102357 - L2 LINE L2 -966 2348 1954 185 284 108 0 chr5 178983326 178983400 -24102132 - MIR SINE MIR -130 132 51 946 268 28 5 chr5 178983573 178984182 -24101350 + L1ME3A LINE L1 5903 6647 -21 284 261 184 52 chr5 178984372 178984873 -24100659 - L1ME4a LINE L1 -229 5892 5326 298 356 11 0 chr5 178985527 178985617 -24099915 - L2 LINE L2 -26 3246 3156 408 360 23 14 chr5 178986058 178986272 -24099260 - MLT1K LTR MaLR -119 469 254 3804 140 48 60 chr5 178988851 178989646 -24095886 - LTR1 LTR ERV1 0 785 1 388 189 57 81 chr5 178990077 178990203 -24095329 + MER91B DNA MER1_type 1 127 -63 354 317 0 10 chr5 178990220 178990324 -24095208 + MER91B DNA MER1_type 87 189 -1 187 269 0 39 chr5 178995557 178995609 -24089923 - L3 LINE CR1 -1233 344 295 243 304 20 39 chr5 178996337 178996439 -24089093 + MIR SINE MIR 41 140 -68 2145 105 0 17 chr5 178996739 178997072 -24088460 - AluSc SINE Alu 0 309 5 1994 149 0 32 chr5 178997918 178998234 -24087298 - AluSx SINE Alu -6 306 1 795 315 135 17 chr5 178998361 178998969 -24086563 - L2 LINE L2 -14 3299 2628 383 298 99 6 chr5 178999370 178999531 -24086001 + MIR3 SINE MIR 33 208 0 1049 115 3 8 chr5 178999844 179000030 -24085502 - L1M3 LINE L1 -604 5698 5512 362 329 140 63 chr5 179001066 179001510 -24084022 + L2 LINE L2 2758 3229 -43 201 356 27 0 chr5 179002055 179002128 -24083404 - L2 LINE L2 -10 3262 3188 233 214 0 43 chr5 179002389 179002459 -24083073 - MLT1K LTR MaLR -388 161 95 2577 14 0 3 chr5 179003488 179003777 -24081755 + AluYb8 SINE Alu 19 306 -12 257 319 54 54 chr5 179004803 179004969 -24080563 - MIR SINE MIR 0 262 97 1739 177 7 13 chr5 179005215 179005514 -24080018 + AluJb SINE Alu 1 297 -15 727 85 0 0 chr5 179006410 179006504 -24079028 - FRAM SINE Alu -48 128 35 3038 193 92 16 chr5 179006641 179007373 -24078159 + LTR48 LTR ERV1 1 787 0 272 377 75 7 chr5 179007733 179007879 -24077653 + L2 LINE L2 3117 3272 0 598 324 70 7 chr5 179008434 179008718 -24076814 + L2 LINE L2 2417 2718 -596 489 304 114 9 chr5 179008787 179009014 -24076518 - L2 LINE L2 -1479 1835 1585 180 0 0 0 chr5 179009146 179009166 -24076366 + (TTG)n Simple_repeat Simple_repeat 2 21 0 666 216 45 71 chr5 179009496 179009765 -24075767 + Charlie8 DNA MER1_type 1 262 -2155 2330 74 3 10 chr5 179009808 179010106 -24075426 - AluY SINE Alu -15 296 1 297 276 81 0 chr5 179010186 179010273 -24075259 + L2 LINE L2 3171 3264 -8 * 356 332 65 100 chr5 179010266 179010724 -24074808 + L2 LINE L2 2831 3272 0 186 384 134 0 chr5 179010842 179010954 -24074578 + L2 LINE L2 3097 3223 -49 21 0 0 0 chr5 179011960 179011981 -24073551 + AT_rich Low_complexity Low_complexity 1 21 0 267 133 0 0 chr5 179012861 179012906 -24072626 + (T)n Simple_repeat Simple_repeat 1 45 0 288 111 0 0 chr5 179014613 179014658 -24070874 + (T)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 179015290 179015312 -24070220 + AT_rich Low_complexity Low_complexity 1 22 0 226 352 23 0 chr5 179015998 179016086 -24069446 + MIR SINE MIR 167 256 -6 * 327 279 66 49 chr5 179016084 179016267 -24069265 + MIR SINE MIR 44 229 -33 21 0 0 0 chr5 179017325 179017346 -24068186 + AT_rich Low_complexity Low_complexity 1 21 0 336 248 68 49 chr5 179017485 179017693 -24067839 - Charlie8 DNA MER1_type -1002 1415 117 1156 50 0 0 chr5 179018600 179018741 -24066791 + AluY SINE Alu 171 311 0 451 272 83 24 chr5 179019986 179020155 -24065377 + MIR SINE MIR 3 181 -81 1880 134 58 0 chr5 179020956 179021247 -24064285 - AluSx SINE Alu -4 308 1 426 319 106 16 chr5 179022329 179022517 -24063015 + MIR SINE MIR 14 218 -44 501 300 93 25 chr5 179022679 179022916 -24062616 + MIR SINE MIR 4 256 -6 433 299 28 7 chr5 179023020 179023164 -24062368 + MIR SINE MIR 46 192 -70 255 203 0 17 chr5 179024350 179024409 -24061123 - L2 LINE L2 -18 3295 3238 226 265 145 43 chr5 179025320 179025437 -24060095 - MIR3 SINE MIR -76 132 4 376 316 22 7 chr5 179027383 179027519 -24058013 - MIR SINE MIR -29 233 96 988 129 0 14 chr5 179027623 179027770 -24057762 - FRAM SINE Alu -2 174 30 505 295 13 66 chr5 179029176 179029403 -24056129 - MIR SINE MIR -33 229 15 591 297 21 10 chr5 179034509 179034701 -24050831 - MIR SINE MIR -68 194 1 288 315 169 0 chr5 179039272 179039402 -24046130 + MIR SINE MIR 9 160 -102 376 236 0 22 chr5 179039628 179039717 -24045815 + MIR SINE MIR 70 156 -106 192 135 0 0 chr5 179040275 179040312 -24045220 + (GA)n Simple_repeat Simple_repeat 1 37 0 289 286 50 57 chr5 179042735 179042875 -24042657 + MIR SINE MIR 8 146 -116 316 273 166 7 chr5 179042904 179043043 -24042489 - MIR SINE MIR -12 250 90 1291 206 22 11 chr5 179044516 179044793 -24040739 - AluJo SINE Alu -21 291 12 440 243 46 33 chr5 179044819 179044971 -24040561 - MIR SINE MIR -28 234 81 428 266 16 39 chr5 179045104 179045232 -24040300 - MIR SINE MIR -102 160 36 842 233 40 31 chr5 179046609 179046837 -24038695 + MIR SINE MIR 12 241 -21 495 238 143 32 chr5 179049958 179050210 -24035322 + L1ME4a LINE L1 5841 6120 -1 2643 45 0 3 chr5 179053165 179053474 -24032058 - AluY SINE Alu 0 311 4 21 0 0 0 chr5 179053914 179053935 -24031597 + AT_rich Low_complexity Low_complexity 1 21 0 282 307 55 16 chr5 179054485 179054612 -24030920 - MIR SINE MIR -50 212 81 2129 238 27 41 chr5 179056765 179057186 -24028346 - MER119 DNA MER1_type 0 583 170 1832 186 0 0 chr5 179057186 179057487 -24028045 + AluJo SINE Alu 1 301 -11 2129 238 27 41 chr5 179057487 179057625 -24027907 - MER119 DNA MER1_type -413 170 32 844 234 97 9 chr5 179057746 179057973 -24027559 - MIR SINE MIR 0 262 16 200 319 62 44 chr5 179058206 179058319 -24027213 + MIR SINE MIR 33 147 -115 300 296 37 37 chr5 179058397 179058532 -24027000 - L2 LINE L2 -34 3238 3104 21 0 0 0 chr5 179058808 179058829 -24026703 + AT_rich Low_complexity Low_complexity 1 21 0 253 337 72 61 chr5 179058954 179059316 -24026216 - L2 LINE L2 -86 3186 2821 1880 128 70 0 chr5 179059783 179060056 -24025476 + AluSx SINE Alu 1 292 -20 247 221 15 15 chr5 179062180 179062248 -24023284 + L1ME4a LINE L1 5508 5575 -546 199 392 14 0 chr5 179063010 179063084 -24022448 - MIR SINE MIR -87 121 47 247 283 109 11 chr5 179063170 179063262 -24022270 - MIR SINE MIR -45 217 117 435 240 75 60 chr5 179063621 179063821 -24021711 - MIR SINE MIR 0 262 60 605 199 112 59 chr5 179066784 179067140 -24018392 + L1ME4a LINE L1 5734 6108 -13 645 276 110 22 chr5 179067412 179067640 -24017892 + MIR SINE MIR 3 250 -12 237 366 0 0 chr5 179067916 179067998 -24017534 + L2 LINE L2 3186 3267 -5 198 143 0 0 chr5 179075053 179075088 -24010444 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 192 77 0 0 chr5 179075322 179075348 -24010184 + (A)n Simple_repeat Simple_repeat 1 26 0 324 359 43 0 chr5 179075774 179075891 -24009641 + L2 LINE L2 3151 3272 0 839 262 44 0 chr5 179075954 179076179 -24009353 + MIR SINE MIR 20 254 -8 245 311 56 0 chr5 179076222 179076312 -24009220 - L2 LINE L2 -5 3267 3173 319 342 27 32 chr5 179076346 179076533 -24008999 - MIR SINE MIR 0 262 77 429 36 0 0 chr5 179080028 179080084 -24005448 - AluY SINE Alu -9 309 254 314 282 113 62 chr5 179081091 179081286 -24004246 + L2 LINE L2 3109 3313 0 25 0 0 0 chr5 179081924 179081949 -24003583 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr5 179082311 179082333 -24003199 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2322 78 0 0 chr5 179083908 179084214 -24001318 - AluY SINE Alu 0 306 1 423 288 0 0 chr5 179085221 179085332 -24000200 + MIR3 SINE MIR 82 192 -16 656 246 123 14 chr5 179085369 179085580 -23999952 - MIR SINE MIR -1 261 28 267 336 28 49 chr5 179085650 179085793 -23999739 + MIR3 SINE MIR 31 170 -38 469 254 97 38 chr5 179085851 179086036 -23999496 - L2 LINE L2 0 3313 3118 208 292 31 50 chr5 179086220 179086341 -23999191 + MIR SINE MIR 55 171 -62 370 274 45 13 chr5 179088049 179088206 -23997326 + L1ME4a LINE L1 5746 5907 -214 284 287 93 8 chr5 179088566 179088695 -23996837 + L1ME4a LINE L1 5973 6112 -9 293 289 156 16 chr5 179088850 179088978 -23996554 + MIR SINE MIR 23 168 -94 930 322 48 82 chr5 179091535 179092425 -23993107 + L2 LINE L2 2411 3271 -1 319 266 110 18 chr5 179092616 179092725 -23992807 - MIR SINE MIR -20 242 124 382 293 71 14 chr5 179093158 179093298 -23992234 - MIR3 SINE MIR -52 156 9 188 300 0 0 chr5 179093377 179093427 -23992105 - L2 LINE L2 -362 2910 2861 397 311 61 6 chr5 179094236 179094400 -23991132 - MIR SINE MIR -41 221 49 284 336 10 10 chr5 179094455 179094559 -23990973 + GA-rich Low_complexity Low_complexity 2 105 0 22 0 0 0 chr5 179096357 179096379 -23989153 + AT_rich Low_complexity Low_complexity 1 22 0 663 37 0 0 chr5 179097125 179097207 -23988325 + (CA)n Simple_repeat Simple_repeat 2 83 0 198 0 0 0 chr5 179097687 179097709 -23987823 + (GA)n Simple_repeat Simple_repeat 1 22 0 388 182 57 23 chr5 179098023 179098111 -23987421 + MER5A DNA MER1_type 16 106 -83 341 331 17 51 chr5 179101517 179101695 -23983837 - MIR3 SINE MIR -3 205 34 839 200 115 95 chr5 179101785 179102291 -23983241 + MER113 DNA MER1_type? 6 521 0 341 349 120 45 chr5 179102642 179103392 -23982140 + L2 LINE L2 2044 2849 -465 228 329 38 0 chr5 179103507 179103586 -23981946 + L2 LINE L2 2995 3076 -196 1842 152 17 17 chr5 179103754 179104067 -23981465 + AluJb SINE Alu 1 313 0 424 259 81 6 chr5 179104701 179104875 -23980657 + L1ME4a LINE L1 5933 6119 -2 338 317 122 6 chr5 179105471 179105651 -23979881 - MIR SINE MIR -1 261 61 23 33 0 0 chr5 179106398 179106428 -23979104 + AT_rich Low_complexity Low_complexity 1 30 0 488 252 19 63 chr5 179107249 179107408 -23978124 + L2 LINE L2 3162 3313 0 33 25 0 0 chr5 179107771 179107811 -23977721 + AT_rich Low_complexity Low_complexity 1 40 0 567 314 12 39 chr5 179108953 179109208 -23976324 + MIR SINE MIR 15 262 0 219 36 0 0 chr5 179109397 179109425 -23976107 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 214 245 19 0 chr5 179109438 179109491 -23976041 - L2 LINE L2 -6 3266 3213 267 290 69 69 chr5 179110959 179111104 -23974428 + MIR3 SINE MIR 33 177 -31 2271 117 0 0 chr5 179112422 179112721 -23972811 + AluSg SINE Alu 1 299 -11 261 346 28 60 chr5 179112721 179112893 -23972639 - MIR3 SINE MIR -16 192 25 539 322 96 26 chr5 179114409 179114639 -23970893 + MIR SINE MIR 17 262 0 203 208 19 19 chr5 179114797 179114850 -23970682 + (CTA)n Simple_repeat Simple_repeat 3 55 0 606 275 101 0 chr5 179114975 179115164 -23970368 + MIR SINE MIR 52 259 -3 306 331 53 0 chr5 179116717 179116850 -23968682 + MIR SINE MIR 110 249 -13 1396 197 56 14 chr5 179120532 179120816 -23964716 + AluJo SINE Alu 3 298 -14 23 0 0 0 chr5 179120816 179120839 -23964693 + AT_rich Low_complexity Low_complexity 1 23 0 769 307 34 13 chr5 179121105 179121343 -23964189 - Charlie8 DNA MER1_type -2166 251 9 435 294 73 25 chr5 179121389 179121675 -23963857 + L1ME4a LINE L1 5655 5954 -167 22 0 0 0 chr5 179121878 179121900 -23963632 + AT_rich Low_complexity Low_complexity 1 22 0 189 107 0 0 chr5 179123052 179123080 -23962452 + (A)n Simple_repeat Simple_repeat 1 28 0 217 146 0 24 chr5 179125034 179125075 -23960457 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 354 23 0 0 chr5 179125324 179125367 -23960165 + (TG)n Simple_repeat Simple_repeat 1 43 0 1116 160 44 34 chr5 179128291 179128497 -23957035 - MER3 DNA MER1_type -1 208 1 826 293 23 55 chr5 179128627 179128975 -23956557 - MER102b DNA MER1_type -1 340 4 666 245 53 58 chr5 179129867 179130075 -23955457 + MIR SINE MIR 13 219 -43 269 313 0 0 chr5 179130093 179130173 -23955359 + GA-rich Low_complexity Low_complexity 2 81 0 205 270 16 16 chr5 179131636 179131699 -23953833 + MIR SINE MIR 194 256 -6 305 328 31 8 chr5 179132896 179133024 -23952508 + MIR SINE MIR 117 247 -15 216 256 122 67 chr5 179133499 179133589 -23951943 + L2 LINE L2 3178 3272 0 393 188 152 18 chr5 179135035 179135147 -23950385 - MIR3 SINE MIR -21 187 61 1574 145 38 28 chr5 179135452 179135741 -23949791 + AluJo SINE Alu 1 292 -20 531 294 7 7 chr5 179136477 179136623 -23948909 + MIR SINE MIR 13 158 -104 628 285 42 19 chr5 179136685 179136899 -23948633 + MIR SINE MIR 37 255 -7 230 259 148 37 chr5 179137808 179137889 -23947643 + MIR3 SINE MIR 76 165 -43 469 356 114 43 chr5 179138478 179138654 -23946878 + L2 LINE L2 2804 2966 -306 1491 185 144 50 chr5 179138654 179139016 -23946516 + MSTD LTR MaLR 1 396 0 469 356 114 43 chr5 179139016 179139260 -23946272 + L2 LINE L2 2966 3254 -18 253 280 56 32 chr5 179139416 179139541 -23945991 - MIR3 SINE MIR -3 205 78 205 133 22 22 chr5 179139660 179139705 -23945827 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 216 273 0 0 chr5 179140462 179140506 -23945026 + polypurine Low_complexity Low_complexity 4 47 0 449 232 205 62 chr5 179142255 179142514 -23943018 + MER102a DNA MER1_type 1 296 -34 302 282 73 48 chr5 179142552 179142676 -23942856 - MIR3 SINE MIR -52 156 30 798 89 0 0 chr5 179143635 179143747 -23941785 + (TGGA)n Simple_repeat Simple_repeat 1 112 0 659 271 88 0 chr5 179147679 179147871 -23937661 - MER3 DNA MER1_type 0 209 1 527 241 96 37 chr5 179148329 179148516 -23937016 + MIR SINE MIR 58 255 -7 21 36 0 0 chr5 179149248 179149276 -23936256 + AT_rich Low_complexity Low_complexity 1 28 0 454 155 204 0 chr5 179149545 179149648 -23935884 + L1MD2 LINE L1 5788 5911 -448 749 158 140 12 chr5 179149648 179149812 -23935720 + MLT1B LTR MaLR 1 185 -205 1426 221 32 9 chr5 179149816 179150156 -23935376 + L1MD2 LINE L1 6012 6359 0 3077 149 53 37 chr5 179150163 179150574 -23934958 + L1MC2 LINE L1 5736 6162 -182 1678 166 3 30 chr5 179150574 179150869 -23934663 - AluJb SINE Alu -25 287 1 3077 149 53 37 chr5 179150869 179151055 -23934477 + L1MC2 LINE L1 6162 6343 -1 206 314 0 0 chr5 179151131 179151182 -23934350 - MIR3 SINE MIR -7 201 151 276 305 53 30 chr5 179151509 179151640 -23933892 - MIR3 SINE MIR -53 155 22 2033 128 3 3 chr5 179151665 179151954 -23933578 - AluSc SINE Alu -20 289 1 370 308 19 19 chr5 179152649 179152753 -23932779 + MIR SINE MIR 6 109 -153 576 306 47 28 chr5 179152779 179153034 -23932498 - L2 LINE L2 -28 3285 3026 925 143 0 0 chr5 179153053 179153186 -23932346 - AluSq/x SINE Alu -180 133 1 381 298 0 60 chr5 179153226 179153377 -23932155 - L2 LINE L2 -341 2972 2831 200 338 0 0 chr5 179153362 179153433 -23932099 + MIR SINE MIR 179 249 -13 * 213 331 79 24 chr5 179154374 179154501 -23931031 + L2 LINE L2 2936 3069 -244 1286 103 36 26 chr5 179154511 179154706 -23930826 + AluSc SINE Alu 107 303 -6 439 184 88 18 chr5 179154855 179154969 -23930563 + MLT1J2 LTR MaLR 32 153 -297 370 346 28 33 chr5 179155015 179155226 -23930306 + MLT1J2 LTR MaLR 230 439 -11 266 343 0 0 chr5 179155231 179155301 -23930231 + L2 LINE L2 3193 3262 -51 617 278 26 31 chr5 179157100 179157327 -23928205 + MIR SINE MIR 36 261 -1 225 327 151 5 chr5 179157521 179157726 -23927806 - L2 LINE L2 -942 2372 2138 1159 163 8 100 chr5 179158480 179158720 -23926812 + MER20 DNA MER1_type 1 218 -1 228 283 0 0 chr5 179158865 179158918 -23926614 - MIR SINE MIR -61 147 95 2435 86 0 10 chr5 179159549 179159863 -23925669 + AluY SINE Alu 1 311 0 342 248 307 0 chr5 179160319 179160456 -23925076 + MER5A DNA MER1_type 9 187 -2 1611 202 16 16 chr5 179160756 179161068 -23924464 - AluSx SINE Alu 0 312 1 2896 6 0 0 chr5 179162044 179162355 -23923177 - AluYa5 SINE Alu 0 311 1 733 216 0 0 chr5 179162481 179162615 -23922917 - MER94 DNA DNA 0 134 1 540 322 16 22 chr5 179163851 179164034 -23921498 + MIR SINE MIR 4 185 -77 748 271 115 5 chr5 179164106 179164324 -23921208 - MIR SINE MIR -16 246 5 427 269 71 35 chr5 179165894 179166035 -23919497 - MIR3 SINE MIR -31 177 32 201 380 0 13 chr5 179166459 179166538 -23918994 + L2 LINE L2 3194 3271 -1 237 238 63 0 chr5 179166656 179166719 -23918813 + MIR SINE MIR 113 179 -83 756 278 22 6 chr5 179166732 179166912 -23918620 + MIR SINE MIR 57 239 -23 180 315 41 14 chr5 179166904 179166977 -23918555 + L2 LINE L2 3174 3248 -24 * 195 129 0 0 chr5 179167084 179167115 -23918417 + (A)n Simple_repeat Simple_repeat 1 31 0 753 266 83 9 chr5 179169440 179169658 -23915874 - MIR SINE MIR -21 241 8 23 0 0 0 chr5 179169801 179169824 -23915708 + AT_rich Low_complexity Low_complexity 1 23 0 205 313 61 61 chr5 179170657 179170887 -23914645 + L2 LINE L2 2841 3070 -202 249 228 208 40 chr5 179171712 179171813 -23913719 - L2 LINE L2 -6 3266 3149 185 148 0 0 chr5 179171945 179171972 -23913560 + MER5A DNA MER1_type 157 183 -6 2011 122 36 0 chr5 179172110 179172389 -23913143 + AluSx SINE Alu 1 289 -23 1666 131 26 0 chr5 179172484 179172713 -23912819 + AluSx SINE Alu 1 235 -77 354 112 84 28 chr5 179172742 179172849 -23912683 + GA-rich Low_complexity Low_complexity 4 116 0 377 281 144 13 chr5 179173060 179173213 -23912319 - MIR SINE MIR -43 219 47 1583 112 85 68 chr5 179173415 179173710 -23911822 - AluSx SINE Alu -12 300 1 236 361 10 0 chr5 179173879 179173976 -23911556 - MIR SINE MIR -2 260 163 521 313 92 17 chr5 179174379 179174619 -23910913 - MIR SINE MIR -3 259 2 284 267 53 0 chr5 179174989 179175064 -23910468 + L2 LINE L2 3194 3272 0 542 239 17 91 chr5 179175910 179176086 -23909446 - MIR SINE MIR -23 239 77 * 583 311 5 15 chr5 179176083 179176279 -23909253 - L2 LINE L2 -14 3299 3106 323 271 47 19 chr5 179176377 179176484 -23909048 + AluSq/x SINE Alu 1 110 -193 1028 211 50 0 chr5 179176990 179177189 -23908343 - MER3 DNA MER1_type 0 209 1 1524 168 21 7 chr5 179177299 179177584 -23907948 + L1MB7 LINE L1 5542 5830 -354 682 135 0 10 chr5 179177919 179178023 -23907509 + L1M3 LINE L1 5655 5757 -414 1223 191 5 14 chr5 179178025 179178235 -23907297 - AluJo SINE Alu -104 208 1 2318 166 24 98 chr5 179178482 179179025 -23906507 - MLT1D LTR MaLR -2 503 1 233 316 25 0 chr5 179179027 179179106 -23906426 + L2 LINE L2 3153 3233 -39 294 176 95 40 chr5 179179877 179179951 -23905581 + MLT1K LTR MaLR 434 511 -77 454 252 115 22 chr5 179180200 179180339 -23905193 - MIR3 SINE MIR -21 187 36 1464 177 30 20 chr5 179183887 179184187 -23901345 - AluJo SINE Alu -9 303 1 435 165 24 12 chr5 179184190 179184275 -23901257 - FLAM_A SINE Alu -10 132 47 1018 155 0 18 chr5 179184350 179184542 -23900990 - AluJo SINE Alu 0 309 121 2199 122 3 0 chr5 179184543 179184854 -23900678 - AluSx SINE Alu 0 312 1 680 294 52 32 chr5 179184976 179185228 -23900304 - MIR SINE MIR -2 260 4 865 152 0 0 chr5 179185272 179185397 -23900135 - AluJo SINE Alu -187 125 1 184 296 222 9 chr5 179185417 179185525 -23900007 + L2 LINE L2 3183 3313 0 519 233 46 112 chr5 179186018 179186314 -23899218 + MER102a DNA MER1_type 24 317 -13 183 184 0 0 chr5 179186391 179186429 -23899103 + (TG)n Simple_repeat Simple_repeat 1 38 0 442 355 24 68 chr5 179186711 179187049 -23898483 - MLT1K LTR MaLR -246 342 20 405 250 101 48 chr5 179188471 179188659 -23896873 - MIR SINE MIR -34 228 31 337 263 0 0 chr5 179188958 179189034 -23896498 - MIR SINE MIR -65 143 68 207 247 82 31 chr5 179189135 179189232 -23896300 + L2 LINE L2 2991 3092 -221 * 249 264 97 14 chr5 179189226 179189298 -23896234 + L2 LINE L2 3195 3272 0 284 269 50 59 chr5 179190307 179190426 -23895106 - MIR SINE MIR -127 135 18 207 0 0 0 chr5 179190576 179190599 -23894933 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 233 307 80 25 chr5 179192849 179193012 -23892520 + L2 LINE L2 2911 3082 -190 242 317 70 25 chr5 179193218 179193419 -23892113 + L2 LINE L2 2854 3062 -210 498 286 138 9 chr5 179193753 179193970 -23891562 - MIR SINE MIR -12 250 6 385 276 160 13 chr5 179195549 179195774 -23889758 - L1ME4a LINE L1 -249 5872 5615 2208 113 30 3 chr5 179197546 179197847 -23887685 + AluSx SINE Alu 1 309 -3 275 353 10 10 chr5 179198003 179198105 -23887427 - L3 LINE CR1 -7 1570 1469 219 271 159 51 chr5 179198110 179198452 -23887080 - L2 LINE L2 -39 3274 2848 440 326 76 52 chr5 179198516 179198876 -23886656 - L3 LINE CR1 -156 1421 1053 863 279 56 0 chr5 179198876 179199109 -23886423 + MIR SINE MIR 2 247 -15 368 276 134 0 chr5 179199615 179199742 -23885790 - MIR3 SINE MIR -7 201 58 414 57 0 0 chr5 179200408 179200461 -23885071 + (TA)n Simple_repeat Simple_repeat 1 53 0 324 0 0 0 chr5 179203147 179203183 -23882349 + (CA)n Simple_repeat Simple_repeat 2 37 0 1825 177 27 0 chr5 179203966 179204265 -23881267 + AluJb SINE Alu 1 307 -5 482 353 91 15 chr5 179204379 179204719 -23880813 + L3 LINE CR1 1137 1502 -75 23 0 0 0 chr5 179204911 179204934 -23880598 + AT_rich Low_complexity Low_complexity 1 23 0 433 306 90 0 chr5 179205215 179205359 -23880173 - MIR3 SINE MIR 0 208 52 1976 150 0 16 chr5 179205756 179206063 -23879469 - AluSg SINE Alu -8 302 1 234 0 0 0 chr5 179206560 179206586 -23878946 + (T)n Simple_repeat Simple_repeat 1 26 0 1125 249 93 33 chr5 179206959 179207408 -23878124 + MER113 DNA MER1_type? 1 476 -45 465 50 0 0 chr5 179208591 179208651 -23876881 + (CA)n Simple_repeat Simple_repeat 2 61 0 348 350 0 29 chr5 179209556 179209693 -23875839 - MIR3 SINE MIR 0 208 76 25 0 0 0 chr5 179209707 179209732 -23875800 + AT_rich Low_complexity Low_complexity 1 25 0 443 281 56 28 chr5 179209747 179209925 -23875607 - MIR SINE MIR 0 262 80 180 77 0 0 chr5 179211256 179211282 -23874250 + (CA)n Simple_repeat Simple_repeat 2 27 0 552 225 5 91 chr5 179212003 179212190 -23873342 - MIR SINE MIR -10 252 82 2045 138 0 13 chr5 179212209 179212513 -23873019 - AluSx SINE Alu -12 300 1 642 40 0 0 chr5 179213122 179213197 -23872335 - L1P2 LINE L1 -397 5757 5683 745 64 0 0 chr5 179213197 179213291 -23872241 + L1PA5 LINE L1 6061 6154 0 518 302 6 45 chr5 179213485 179213664 -23871868 - MIR3 SINE MIR -14 194 23 224 325 12 0 chr5 179216731 179216811 -23868721 + (TA)n Simple_repeat Simple_repeat 2 82 0 192 152 0 0 chr5 179216863 179216896 -23868636 + (TA)n Simple_repeat Simple_repeat 2 34 0 233 241 72 0 chr5 179216903 179216986 -23868546 - L1MC4 LINE L1 -1339 6703 6615 * 255 241 72 0 chr5 179216914 179216997 -23868535 + L1MC4 LINE L1 6615 6703 -1339 414 304 138 6 chr5 179217150 179217331 -23868201 - MIR SINE MIR -33 229 25 259 317 79 30 chr5 179217366 179217467 -23868065 - L2 LINE L2 -45 3227 3122 180 265 0 0 chr5 179217959 179218008 -23867524 + MIR SINE MIR 103 151 -111 * 290 364 44 47 chr5 179218005 179218280 -23867252 - L2 LINE L2 -4 3268 2995 592 322 54 8 chr5 179218306 179218545 -23866987 - MIR SINE MIR -7 255 6 229 356 118 50 chr5 179218561 179218960 -23866572 - L2 LINE L2 -338 2976 2551 434 353 67 13 chr5 179219144 179219382 -23866150 - MIR SINE MIR -4 258 8 2107 103 35 0 chr5 179220295 179220577 -23864955 + AluSq SINE Alu 1 292 -21 28 61 0 0 chr5 179221101 179221150 -23864382 + AT_rich Low_complexity Low_complexity 1 49 0 272 70 23 0 chr5 179221821 179221864 -23863668 + (TG)n Simple_repeat Simple_repeat 2 45 0 244 267 0 33 chr5 179222735 179222795 -23862737 + L2 LINE L2 3251 3308 -5 22 0 0 0 chr5 179222970 179222992 -23862540 + AT_rich Low_complexity Low_complexity 1 22 0 305 358 88 14 chr5 179223191 179223339 -23862193 - MIR3 SINE MIR -14 194 36 1282 190 109 6 chr5 179223346 179223657 -23861875 - MER2 DNA MER2_type 0 344 2 243 204 0 0 chr5 179225170 179225224 -23860308 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 189 0 0 0 chr5 179225470 179225491 -23860041 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 228 67 0 0 chr5 179225646 179225676 -23859856 + (CA)n Simple_repeat Simple_repeat 1 30 0 225 81 27 230 chr5 179225732 179226078 -23859454 - MER46A DNA MER2_type -81 155 97 1131 146 75 64 chr5 179225741 179225772 -23859760 + MER46B DNA MER2_type 1 30 -2701 1945 150 0 0 chr5 179225772 179226045 -23859487 + AluSx SINE Alu 1 273 -39 1131 146 75 64 chr5 179226045 179226293 -23859239 + MER46B DNA MER2_type 30 158 -78 23 0 0 0 chr5 179226393 179226416 -23859116 + AT_rich Low_complexity Low_complexity 1 23 0 349 300 97 13 chr5 179228214 179228398 -23857134 + MIR SINE MIR 18 212 -50 435 210 0 81 chr5 179228426 179228550 -23856982 - MER46C DNA MER2_type -1 337 224 421 178 14 0 chr5 179228860 179228933 -23856599 + FLAM_A SINE Alu 51 124 -18 395 273 144 0 chr5 179229009 179229148 -23856384 - MIR SINE MIR -11 251 93 221 288 99 18 chr5 179229875 179229986 -23855546 + L2 LINE L2 3188 3307 -6 406 309 181 5 chr5 179229987 179230191 -23855341 - MIR SINE MIR 0 262 23 3704 58 20 4 chr5 179230652 179231148 -23854384 + L1PA12 LINE L1 5665 6168 0 184 295 64 51 chr5 179231286 179231364 -23854168 + MIR SINE MIR 37 115 -93 306 256 103 0 chr5 179231440 179231557 -23853975 + MIR SINE MIR 134 262 0 297 287 253 0 chr5 179234264 179234414 -23851118 - MIR SINE MIR 0 262 75 505 348 136 8 chr5 179234493 179234846 -23850686 - L3 LINE CR1 -5 1572 1175 301 270 175 15 chr5 179234889 179235026 -23850506 + L2 LINE L2 3155 3313 0 212 114 23 23 chr5 179235043 179235087 -23850445 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 418 281 153 43 chr5 179235175 179235371 -23850161 - MIR SINE MIR 0 262 34 2214 116 0 7 chr5 179235371 179235674 -23849858 + AluSx SINE Alu 1 301 -11 418 281 153 43 chr5 179235674 179235712 -23849820 - MIR SINE MIR -228 34 2 1697 160 53 20 chr5 179235973 179236157 -23849375 - AluJo SINE Alu -2 310 111 384 22 0 0 chr5 179236157 179236202 -23849330 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1697 160 53 20 chr5 179236202 179236317 -23849215 - AluJo SINE Alu -201 111 1 341 228 29 96 chr5 179237753 179237889 -23847643 + MIR SINE MIR 117 243 -19 360 310 16 0 chr5 179238039 179238168 -23847364 + Charlie8 DNA MER1_type 71 201 -2216 608 213 12 55 chr5 179240157 179240321 -23845211 - MIR SINE MIR -70 192 36 314 233 44 11 chr5 179240580 179240670 -23844862 + MER81 DNA DNA 17 109 -5 272 302 23 58 chr5 179240687 179240773 -23844759 - L2 LINE L2 -53 3219 3137 204 64 64 21 chr5 179242679 179242726 -23842806 + GA-rich Low_complexity Low_complexity 4 52 0 191 36 36 0 chr5 179242888 179242916 -23842616 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2271 85 0 64 chr5 179243218 179243548 -23841984 + AluSc SINE Alu 1 309 0 196 194 0 0 chr5 179243746 179243782 -23841750 + MIR SINE MIR 111 146 -116 557 286 22 8 chr5 179246024 179246190 -23839342 + MER5A DNA MER1_type 7 186 -3 322 241 0 36 chr5 179246205 179246288 -23839244 - MIR SINE MIR -78 184 105 614 268 79 26 chr5 179250011 179250239 -23835293 - MIR SINE MIR -13 249 10 348 266 36 58 chr5 179251316 179251455 -23834077 - MIR3 SINE MIR -30 178 43 264 360 27 75 chr5 179251837 179252023 -23833509 + MER5A DNA MER1_type 8 184 -5 283 229 0 0 chr5 179252490 179252560 -23832972 + MLT1I LTR MaLR 340 409 0 25 0 0 0 chr5 179252682 179252707 -23832825 + AT_rich Low_complexity Low_complexity 1 25 0 323 143 0 83 chr5 179253303 179253387 -23832145 + L1MB3 LINE L1 6106 6182 -1 338 148 0 16 chr5 179253458 179253519 -23832013 + MIR SINE MIR 80 139 -123 926 185 25 0 chr5 179253553 179253715 -23831817 - FAM SINE Alu -9 166 1 279 250 64 2 chr5 179253799 179253975 -23831557 + MLT1J2 LTR MaLR 42 260 -190 811 214 8 127 chr5 179253979 179254183 -23831349 - MER58A DNA MER1_type -2196 224 54 1903 92 40 0 chr5 179254183 179254433 -23831099 + AluSg SINE Alu 45 304 -6 811 214 8 127 chr5 179254433 179254480 -23831052 - MER58A DNA MER1_type -2366 54 3 339 248 256 0 chr5 179254495 179254620 -23830912 + MLT1J2 LTR MaLR 271 427 -23 2138 113 48 0 chr5 179254948 179255241 -23830291 - AluSq SINE Alu -6 307 1 306 333 34 3 chr5 179255435 179255545 -23829987 - MIR SINE MIR -61 147 34 706 287 62 16 chr5 179255885 179256129 -23829403 - MIR SINE MIR 0 262 8 2272 95 3 0 chr5 179256317 179256613 -23828919 - AluSg SINE Alu -13 297 1 22 70 0 0 chr5 179257142 179257185 -23828347 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 179257212 179257234 -23828298 + AT_rich Low_complexity Low_complexity 1 22 0 339 25 0 0 chr5 179257696 179257736 -23827796 + (CA)n Simple_repeat Simple_repeat 2 41 0 446 266 117 19 chr5 179258181 179258596 -23826936 + L1ME LINE L1 1021 1338 -4867 1854 53 41 4 chr5 179258617 179258860 -23826672 - AluY SINE Alu -29 282 31 5276 100 23 47 chr5 179258860 179260274 -23825258 + pTR5 LTR ERV1 743 2295 -143 304 330 10 0 chr5 179260378 179260475 -23825057 + HAL1 LINE L1 1506 1603 -904 1639 209 88 12 chr5 179260858 179261289 -23824243 - MLT1C LTR MaLR -3 464 1 450 167 12 12 chr5 179261352 179261436 -23824096 + Tigger7 DNA MER2_type 1 84 -255 1621 131 15 0 chr5 179261474 179261742 -23823790 + Tigger7 DNA MER2_type 2220 2491 0 1965 133 3 11 chr5 179261786 179262100 -23823432 + AluSx SINE Alu 2 313 0 606 253 40 24 chr5 179262101 179262354 -23823178 + L1ME LINE L1 3731 3987 -2228 354 228 89 0 chr5 179262361 179262462 -23823070 + MIR SINE MIR 139 248 -14 577 240 106 75 chr5 179262486 179262636 -23822896 + L1ME LINE L1 5400 5544 -687 1391 160 91 36 chr5 179262636 179262911 -23822621 + AluJo SINE Alu 1 290 -12 577 240 106 75 chr5 179262911 179263081 -23822451 + L1ME LINE L1 5544 5730 -501 4760 226 47 76 chr5 179263084 179263582 -23821950 - L1M4c LINE L1 -2313 4644 4133 2374 130 90 13 chr5 179263582 179263823 -23821709 - L1MB2 LINE L1 -7 6164 5943 1730 182 24 0 chr5 179263823 179264114 -23821418 - AluSx SINE Alu -14 298 1 2374 130 90 13 chr5 179264114 179264327 -23821205 - L1MB2 LINE L1 -228 5943 5675 4760 226 47 76 chr5 179264327 179265892 -23819640 - L1M4c LINE L1 -2824 4133 2523 1378 135 45 9 chr5 179265892 179266114 -23819418 + MER30 DNA MER1_type 1 230 0 4760 226 47 76 chr5 179266114 179266985 -23818547 - L1M4c LINE L1 -4434 2523 1701 2035 145 16 10 chr5 179266985 179267295 -23818237 - AluSx SINE Alu 0 312 1 4760 226 47 76 chr5 179267295 179267658 -23817874 - L1M4c LINE L1 -5256 1701 1329 270 0 0 0 chr5 179267680 179267710 -23817822 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 284 325 39 7 chr5 179267827 179267981 -23817551 - L1M4c LINE L1 -5668 1187 1029 263 313 117 19 chr5 179268373 179268587 -23816945 - L1M4c LINE L1 -6618 241 7 75 80 0 14 chr5 179268633 179268846 -23816686 + AT_rich Low_complexity Low_complexity 1 210 0 205 123 18 18 chr5 179268931 179268988 -23816544 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 318 234 58 84 chr5 179269145 179269299 -23816233 + L1ME3A LINE L1 5924 6073 -97 622 310 76 35 chr5 179269412 179269780 -23815752 - L2 LINE L2 0 3313 2931 194 335 59 65 chr5 179269853 179270023 -23815509 + L3 LINE CR1 1289 1457 -120 269 180 151 72 chr5 179270534 179270673 -23814859 + LTR67 LTR ERVL 406 555 -2 1069 223 101 39 chr5 179272401 179272787 -23812745 - MER113 DNA MER1_type? -40 481 72 262 266 102 14 chr5 179272896 179273069 -23812463 - MIR3 SINE MIR -6 202 11 4143 134 25 15 chr5 179273251 179273966 -23811566 - L1PB4 LINE L1 -6 6150 5429 1943 230 52 4 chr5 179274033 179274511 -23811021 - L1MC4 LINE L1 -499 7543 7043 1439 54 5 11 chr5 179274682 179274868 -23810664 + L1PA7 LINE L1 5967 6151 -3 1361 184 48 124 chr5 179274869 179275391 -23810141 + L1MC4 LINE L1 7560 8041 -1 28 71 0 0 chr5 179275405 179275461 -23810071 + AT_rich Low_complexity Low_complexity 1 56 0 2180 88 7 3 chr5 179276494 179276798 -23808734 + AluSx SINE Alu 1 305 0 355 289 0 0 chr5 179276833 179276923 -23808609 + L1MC4 LINE L1 6614 6703 -1339 321 322 0 0 chr5 179276843 179276933 -23808599 - L1MC4 LINE L1 -1339 6703 6614 * 387 293 8 32 chr5 179276935 179277058 -23808474 + MIR SINE MIR 26 145 -117 855 200 50 15 chr5 179277420 179277620 -23807912 + MER3 DNA MER1_type 2 208 -1 269 211 34 166 chr5 179277974 179278017 -23807515 + MER102b DNA MER1_type 39 86 -255 2167 123 0 0 chr5 179278017 179278309 -23807223 - AluSx SINE Alu -20 292 1 269 211 34 166 chr5 179278309 179278440 -23807092 + MER102b DNA MER1_type 86 190 -151 867 159 36 56 chr5 179278471 179278631 -23806901 - MER3 DNA MER1_type -8 201 44 2230 107 6 22 chr5 179278631 179278949 -23806583 - AluSq SINE Alu 0 313 1 867 159 36 56 chr5 179278949 179278983 -23806549 - MER3 DNA MER1_type -165 44 11 413 316 8 0 chr5 179279002 179279119 -23806413 + MER102b DNA MER1_type 213 330 -11 37701 86 15 7 chr5 179279426 179284696 -23800836 + L1PA6 LINE L1 11 5318 -836 222 62 0 0 chr5 179284696 179284728 -23800804 + (CAA)n Simple_repeat Simple_repeat 3 34 0 37701 86 15 7 chr5 179284728 179285572 -23799960 + L1PA6 LINE L1 5318 6154 0 312 237 106 45 chr5 179285592 179285790 -23799742 - MER102a DNA MER1_type -17 313 104 1484 158 23 15 chr5 179285793 179286053 -23799479 - AluJo SINE Alu -16 296 35 279 304 128 0 chr5 179286105 179286207 -23799325 - MER102a DNA MER1_type -215 115 1 313 263 277 0 chr5 179286399 179286536 -23798996 - MER5B DNA MER1_type -2 176 2 476 211 200 0 chr5 179287208 179287388 -23798144 + MIR SINE MIR 1 216 -46 4840 119 49 32 chr5 179287447 179287535 -23797997 + L1MA9 LINE L1 5404 5489 -823 2256 97 3 3 chr5 179287535 179287835 -23797697 + AluSq SINE Alu 1 300 -13 4840 119 49 32 chr5 179287835 179288637 -23796895 + L1MA9 LINE L1 5489 6309 -3 1647 161 37 37 chr5 179289002 179289300 -23796232 - AluJb SINE Alu -14 298 1 7760 186 8 4 chr5 179289376 179289387 -23796145 - L1 LINE L1 -907 5239 5230 4143 102 10 0 chr5 179289387 179289987 -23795545 - L1PB2 LINE L1 -3 6148 5543 7760 186 8 4 chr5 179289987 179291532 -23794000 - L1 LINE L1 -916 5230 3676 365 138 0 17 chr5 179291691 179291749 -23793783 + AluS SINE Alu 7 63 -238 846 141 0 0 chr5 179291750 179291878 -23793654 + AluSg/x SINE Alu 162 289 -21 22 0 0 0 chr5 179291878 179291900 -23793632 + AT_rich Low_complexity Low_complexity 1 22 0 1829 153 10 10 chr5 179292002 179292346 -23793186 - AluJb SINE Alu 0 312 1 22 0 0 0 chr5 179293202 179293224 -23792308 + AT_rich Low_complexity Low_complexity 1 22 0 368 325 148 6 chr5 179293343 179293512 -23792020 + MIR3 SINE MIR 16 208 0 201 329 35 77 chr5 179293849 179294290 -23791242 - MER5A DNA MER1_type -4 185 49 439 255 19 68 chr5 179293869 179293964 -23791568 + MER5B DNA MER1_type 26 111 -67 2251 97 13 3 chr5 179293964 179294263 -23791269 - AluSx SINE Alu -10 302 1 439 255 19 68 chr5 179294263 179294328 -23791204 + MER5B DNA MER1_type 111 178 0 526 265 7 13 chr5 179294722 179294873 -23790659 - Charlie8 DNA MER1_type -2209 208 59 2247 124 3 0 chr5 179294895 179295201 -23790331 + AluSx SINE Alu 1 307 -5 234 235 176 0 chr5 179295450 179295518 -23790014 - L2 LINE L2 -1 3271 3192 254 319 190 0 chr5 179295689 179295805 -23789727 - MIR3 SINE MIR -67 141 4 290 261 11 11 chr5 179296553 179296641 -23788891 + MLT1I LTR MaLR 315 402 -7 252 285 57 89 chr5 179296990 179297113 -23788419 + MER5B DNA MER1_type 60 178 0 371 320 55 39 chr5 179299436 179299617 -23785915 + MER5A DNA MER1_type 6 189 0 2924 9 0 0 chr5 179302299 179302617 -23782915 - AluYb8 SINE Alu 0 318 1 198 0 0 0 chr5 179304118 179304140 -23781392 + (TAA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr5 179304279 179304300 -23781232 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 179304492 179304536 -23780996 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr5 179305244 179305281 -23780251 + AT_rich Low_complexity Low_complexity 1 37 0 565 265 170 41 chr5 179305382 179305793 -23779739 - L1ME LINE L1 -379 5783 5320 333 283 121 48 chr5 179306283 179306382 -23779150 - L1ME LINE L1 -2472 3674 3584 724 162 8 0 chr5 179306382 179306526 -23779006 + FLAM_A SINE Alu 1 145 0 333 283 121 48 chr5 179306526 179306739 -23778793 - L1ME LINE L1 -2562 3584 3338 509 175 0 0 chr5 179307698 179307801 -23777731 + L1MA4 LINE L1 6191 6293 -7 22 0 0 0 chr5 179309947 179309969 -23775563 + AT_rich Low_complexity Low_complexity 1 22 0 1533 208 18 0 chr5 179310146 179310430 -23775102 - AluJo SINE Alu -23 289 1 2097 99 39 0 chr5 179311749 179312032 -23773500 + AluSx SINE Alu 1 294 -18 1333 88 36 16 chr5 179312704 179312897 -23772635 - MER30 DNA MER1_type -33 197 1 649 250 132 18 chr5 179312983 179313211 -23772321 + MIR SINE MIR 8 261 -1 433 243 191 46 chr5 179315815 179315988 -23769544 - MIR SINE MIR -63 199 2 294 248 146 22 chr5 179317162 179317299 -23768233 - L1ME LINE L1 -423 5698 5545 383 328 156 35 chr5 179317438 179317978 -23767554 - L1ME LINE L1 -776 5370 4766 1097 188 83 0 chr5 179318149 179318367 -23767165 + MER46A DNA MER2_type 1 236 0 1014 211 45 14 chr5 179320122 179320424 -23765108 - MER33 DNA MER1_type -13 311 1 1061 159 35 5 chr5 179320430 179320631 -23764901 + L1PB1 LINE L1 5944 6150 -1 363 43 0 0 chr5 179320638 179320685 -23764847 + AluY SINE Alu 250 296 -5 1117 200 23 5 chr5 179322804 179323019 -23762513 + MER20 DNA MER1_type 1 219 0 1310 164 9 0 chr5 179323321 179323535 -23761997 + L1MB5 LINE L1 5945 6160 -14 1832 148 19 23 chr5 179325485 179325795 -23759737 + AluJb SINE Alu 3 311 -1 1052 96 0 0 chr5 179326403 179326539 -23758993 + AluSg/x SINE Alu 162 297 -15 2376 90 0 3 chr5 179326544 179326845 -23758687 + AluSq SINE Alu 5 304 -9 2073 118 7 3 chr5 179326880 179327168 -23758364 - AluSg SINE Alu -21 289 1 761 244 42 28 chr5 179327175 179327388 -23758144 + MER20 DNA MER1_type 2 217 -2 2395 71 0 39 chr5 179327642 179327953 -23757579 + AluY SINE Alu 1 299 -12 1455 102 5 5 chr5 179328451 179328647 -23756885 - AluSq SINE Alu -117 196 1 223 192 19 0 chr5 179328790 179328842 -23756690 + T-rich Low_complexity Low_complexity 2 54 0 1338 248 51 17 chr5 179328879 179329234 -23756298 + L1MDa LINE L1 2 368 -6172 2244 203 86 37 chr5 179329235 179329483 -23756049 + MER68 LTR ERV1 1 236 -326 2134 123 29 29 chr5 179329483 179329858 -23755674 + THE1C LTR MaLR 1 375 0 2244 203 86 37 chr5 179329858 179330145 -23755387 + MER68 LTR ERV1 236 562 0 789 286 48 0 chr5 179330145 179330376 -23755156 + L1MDa LINE L1 365 606 -5934 241 255 149 21 chr5 179330376 179330470 -23755062 + LTR8 LTR ERV1 21 126 -565 1285 227 57 18 chr5 179330529 179330864 -23754668 + MER87 LTR ERV1 194 541 0 3700 186 100 42 chr5 179330868 179331929 -23753603 + L1MDa LINE L1 859 1981 -4559 2485 206 13 46 chr5 179331929 179332452 -23753080 + MLT2B3 LTR ERVL 1 506 -48 1020 184 13 87 chr5 179332452 179332762 -23752770 + L1MDa LINE L1 2271 2557 -3983 1839 203 49 9 chr5 179332762 179333307 -23752225 + L1MD2 LINE L1 5708 7795 -13 58 70 0 0 chr5 179333307 179333421 -23752111 + AT_rich Low_complexity Low_complexity 1 114 0 1322 206 46 28 chr5 179333507 179333789 -23751743 + AluJb SINE Alu 6 292 -20 1329 223 64 12 chr5 179334189 179334516 -23751016 - MER2 DNA MER2_type 0 344 1 286 244 49 24 chr5 179334550 179334632 -23750900 - L2 LINE L2 0 3313 3230 1932 137 47 33 chr5 179334657 179335016 -23750516 + THE1C LTR MaLR 1 364 -11 297 275 92 63 chr5 179335160 179335367 -23750165 - L2 LINE L2 -1620 1694 1482 595 283 81 41 chr5 179335832 179336338 -23749194 - L1MC/D LINE L1 -297 5824 5292 1443 202 161 6 chr5 179336387 179336728 -23748804 - MLT1F1 LTR MaLR -171 396 3 1963 133 0 0 chr5 179336897 179337175 -23748357 + AluSx SINE Alu 22 299 -13 217 350 39 10 chr5 179341272 179341375 -23744157 + L2 LINE L2 2968 3073 -199 1598 162 107 10 chr5 179341399 179341645 -23743887 - MER44D DNA MER2_type -1882 609 388 1691 147 11 18 chr5 179341645 179341924 -23743608 + AluJo SINE Alu 27 303 -9 1598 162 107 10 chr5 179341924 179341986 -23743546 - MER44D DNA MER2_type -2103 388 1 381 287 30 18 chr5 179342083 179342247 -23743285 + MIR SINE MIR 97 262 0 2225 113 0 25 chr5 179342987 179343306 -23742226 + AluSx SINE Alu 1 311 -1 197 250 0 47 chr5 179344345 179344409 -23741123 + L2 LINE L2 3252 3312 -1 1140 137 64 36 chr5 179344864 179345113 -23740419 + AluJo SINE Alu 3 258 -54 461 87 164 58 chr5 179345335 179345439 -23740093 + AluJb SINE Alu 195 309 -3 608 246 228 15 chr5 179345524 179345725 -23739807 - L2 LINE L2 -1 3312 3155 2042 130 17 13 chr5 179345725 179346025 -23739507 - AluSq SINE Alu -10 303 3 608 246 228 15 chr5 179346025 179346091 -23739441 - L2 LINE L2 -158 3155 2988 304 276 26 20 chr5 179346149 179346301 -23739231 - L1MC4a LINE L1 -1876 5932 5780 234 191 0 0 chr5 179346333 179346380 -23739152 + (TATG)n Simple_repeat Simple_repeat 2 48 0 340 308 209 0 chr5 179347427 179347609 -23737923 - L2 LINE L2 -541 2773 2554 388 237 215 0 chr5 179347999 179348134 -23737398 - MIR SINE MIR -97 165 2 200 274 0 0 chr5 179348643 179348694 -23736838 + (TG)n Simple_repeat Simple_repeat 2 52 0 201 277 15 0 chr5 179355932 179355997 -23729535 + (CA)n Simple_repeat Simple_repeat 2 67 0 186 203 25 38 chr5 179356562 179356641 -23728891 + GA-rich Low_complexity Low_complexity 3 80 0 634 200 21 12 chr5 179356686 179356985 -23728547 + GA-rich Low_complexity Low_complexity 1 301 0 22 0 0 0 chr5 179357254 179357276 -23728256 + GC_rich Low_complexity Low_complexity 1 22 0 275 71 24 0 chr5 179357538 179357580 -23727952 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 261 57 0 0 chr5 179357813 179357848 -23727684 + (T)n Simple_repeat Simple_repeat 1 35 0 312 27 0 0 chr5 179357927 179357964 -23727568 + (A)n Simple_repeat Simple_repeat 1 37 0 181 157 0 39 chr5 179358157 179358208 -23727324 + GA-rich Low_complexity Low_complexity 4 52 0 219 209 22 58 chr5 179359232 179359371 -23726161 + GA-rich Low_complexity Low_complexity 2 135 0 368 237 35 39 chr5 179361274 179361416 -23724116 + MER5A DNA MER1_type 2 141 -42 187 200 22 0 chr5 179362603 179362648 -23722884 - MIR3 SINE MIR -54 154 109 254 279 28 69 chr5 179362852 179363023 -23722509 - MIR SINE MIR -54 208 42 243 0 0 0 chr5 179364330 179364357 -23721175 + (A)n Simple_repeat Simple_repeat 1 27 0 229 320 143 33 chr5 179364971 179365243 -23720289 + L2 LINE L2 2895 3196 -76 436 301 75 29 chr5 179365249 179365488 -23720044 - MIR SINE MIR 0 262 13 238 172 188 0 chr5 179365685 179365749 -23719783 + MIR SINE MIR 66 141 -67 22 0 0 0 chr5 179365966 179365988 -23719544 + AT_rich Low_complexity Low_complexity 1 22 0 2419 90 3 3 chr5 179366161 179366472 -23719060 + AluSq SINE Alu 1 311 -2 975 219 96 65 chr5 179367254 179367651 -23717881 + MLT1I LTR MaLR 1 409 0 2296 113 10 0 chr5 179368003 179368312 -23717220 + AluSx SINE Alu 1 312 0 228 309 24 81 chr5 179368431 179368487 -23717045 + MIR3 SINE MIR 86 133 -75 1124 184 52 143 chr5 179368487 179368894 -23716638 + MLT1A2 LTR MaLR 5 374 0 228 309 24 81 chr5 179368894 179368960 -23716572 + MIR3 SINE MIR 133 201 -7 196 308 113 57 chr5 179371127 179371374 -23714158 + L2 LINE L2 3004 3264 -8 849 224 13 0 chr5 179371834 179371990 -23713542 + MER63A DNA MER1_type 53 210 0 278 322 7 96 chr5 179372042 179372188 -23713344 - L2 LINE L2 -4 3268 3136 350 345 30 30 chr5 179372310 179372510 -23713022 - L2 LINE L2 -526 2788 2589 481 282 76 47 chr5 179373487 179373788 -23711744 + LTR16C LTR ERVL 180 489 -2 607 51 68 0 chr5 179375179 179375296 -23710236 + CT-rich Low_complexity Low_complexity 2 126 0 857 245 5 15 chr5 179378204 179378404 -23707128 + MIR SINE MIR 2 199 -63 204 40 0 0 chr5 179378675 179378700 -23706832 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 297 0 0 0 chr5 179378699 179378732 -23706800 + (CA)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr5 179379488 179379510 -23706022 + AT_rich Low_complexity Low_complexity 1 22 0 449 301 13 58 chr5 179380387 179380543 -23704989 - MIR3 SINE MIR -30 178 30 2312 122 0 3 chr5 179382303 179382615 -23702917 - AluSx SINE Alu 0 312 2 593 276 65 12 chr5 179382796 179382966 -23702566 + MIR3 SINE MIR 5 183 -25 195 316 114 32 chr5 179382994 179383152 -23702380 + MIR SINE MIR 35 205 -57 23 33 0 0 chr5 179385397 179385427 -23700105 + AT_rich Low_complexity Low_complexity 1 30 0 372 43 0 0 chr5 179386138 179386184 -23699348 + (CA)n Simple_repeat Simple_repeat 2 47 0 186 43 0 0 chr5 179386328 179386351 -23699181 + (TTA)n Simple_repeat Simple_repeat 3 25 0 212 277 84 84 chr5 179388456 179388611 -23696921 - MIR3 SINE MIR -6 202 48 549 238 0 0 chr5 179388764 179388869 -23696663 + L2 LINE L2 3200 3304 -9 295 310 234 10 chr5 179389027 179389224 -23696308 - MIR SINE MIR -18 244 4 312 211 0 0 chr5 179389344 179389415 -23696117 + (TA)n Simple_repeat Simple_repeat 1 71 0 253 302 108 65 chr5 179389554 179389693 -23695839 + MIR3 SINE MIR 2 146 -62 225 0 0 0 chr5 179390108 179390133 -23695399 + (T)n Simple_repeat Simple_repeat 1 25 0 224 122 24 0 chr5 179390145 179390186 -23695346 + (TG)n Simple_repeat Simple_repeat 2 43 0 246 141 0 0 chr5 179392254 179392303 -23693229 + L1MB7 LINE L1 5212 5260 -886 243 108 0 0 chr5 179392303 179392340 -23693192 + L1MB7 LINE L1 5224 5260 -886 243 108 0 0 chr5 179392340 179392377 -23693155 + L1MB7 LINE L1 5224 5260 -886 3388 183 66 15 chr5 179392377 179393229 -23692303 + L1MB7 LINE L1 5224 6123 -61 1764 148 37 0 chr5 179393250 179393521 -23692011 - AluJb SINE Alu -31 281 1 1531 178 40 27 chr5 179393591 179393889 -23691643 + AluJo SINE Alu 1 302 -10 1239 101 106 5 chr5 179394175 179394382 -23691150 + MER30 DNA MER1_type 2 229 -1 30 72 0 12 chr5 179394657 179394697 -23690835 + AT_rich Low_complexity Low_complexity 1 40 -42 1809 106 0 4 chr5 179394697 179394932 -23690600 + AluSg SINE Alu 1 234 -76 30 72 0 12 chr5 179394932 179394974 -23690558 + AT_rich Low_complexity Low_complexity 40 82 0 1566 171 62 9 chr5 179395168 179395490 -23690042 - MER2 DNA MER2_type 0 345 7 464 277 106 37 chr5 179395807 179395995 -23689537 - MIR SINE MIR -13 249 49 338 241 78 14 chr5 179396766 179396907 -23688625 + L1ME4a LINE L1 5969 6118 -3 1421 57 34 0 chr5 179397478 179397653 -23687879 - AluSq SINE Alu -132 181 1 1521 91 45 18 chr5 179399317 179399538 -23685994 - MER30 DNA MER1_type 0 230 4 809 181 83 7 chr5 179400996 179401140 -23684392 + FRAM SINE Alu 1 155 -21 1689 178 11 7 chr5 179401144 179401461 -23684071 + AluJb SINE Alu 1 318 0 317 348 71 22 chr5 179401719 179401903 -23683629 - L2 LINE L2 -833 2481 2289 668 199 38 2 chr5 179401921 179402155 -23683377 + AluJo SINE Alu 1 280 -32 281 283 38 57 chr5 179402195 179402301 -23683231 - L2 LINE L2 -45 3227 3124 226 320 162 14 chr5 179402486 179402708 -23682824 - L2 LINE L2 -1185 2129 1875 490 132 0 0 chr5 179403227 179403303 -23682229 + FLAM_A SINE Alu 38 113 -29 334 296 102 41 chr5 179403401 179403597 -23681935 + L1MC4a LINE L1 4634 4841 -1305 304 336 108 9 chr5 179403616 179403830 -23681702 + L1MC4a LINE L1 4883 5117 -1029 1046 281 74 30 chr5 179403879 179404252 -23681280 + L1MC4a LINE L1 5212 5153 -993 1222 217 13 0 chr5 179404252 179404487 -23681045 - MER8 DNA MER2_type -1 238 1 1046 281 74 30 chr5 179404487 179404703 -23680829 + L1MC4a LINE L1 5152 5357 -789 313 255 211 53 chr5 179404838 179405046 -23680486 + L1MC4a LINE L1 5878 6118 -1690 192 77 0 0 chr5 179406802 179406828 -23678704 + (T)n Simple_repeat Simple_repeat 1 26 0 2293 112 0 0 chr5 179407704 179408008 -23677524 + AluSg SINE Alu 1 304 -6 23 0 0 0 chr5 179411403 179411426 -23674106 + GC_rich Low_complexity Low_complexity 1 23 0 223 323 8 23 chr5 179412259 179412389 -23673143 + G-rich Low_complexity Low_complexity 2 129 0 240 59 0 0 chr5 179412673 179412707 -23672825 + (CGG)n Simple_repeat Simple_repeat 1 34 0 27 62 0 0 chr5 179412783 179412831 -23672701 + GC_rich Low_complexity Low_complexity 1 48 0 1642 86 10 0 chr5 179414485 179414717 -23670815 - AluSp SINE Alu 0 309 76 387 0 0 0 chr5 179415872 179415915 -23669617 + (TA)n Simple_repeat Simple_repeat 1 43 0 2898 138 57 50 chr5 179415927 179416543 -23668989 - L1MB7 LINE L1 -40 6144 5525 462 276 98 12 chr5 179416568 179416731 -23668801 + MIR SINE MIR 70 246 -16 1140 147 89 0 chr5 179416768 179416959 -23668573 - AluJb SINE Alu -104 208 1 286 289 117 0 chr5 179417274 179417454 -23668078 - L1MC4 LINE L1 -5 8037 7837 623 286 42 55 chr5 179417975 179418359 -23667173 + MLT1K LTR MaLR 199 577 -11 1080 229 96 104 chr5 179418497 179418736 -23666796 - L1ME3A LINE L1 -79 6083 5844 2081 142 20 0 chr5 179418736 179419038 -23666494 - AluSx SINE Alu -4 308 1 1080 229 96 104 chr5 179419038 179419770 -23665762 - L1ME3A LINE L1 -318 5844 5112 431 267 69 35 chr5 179419802 179420034 -23665498 - L1ME3A LINE L1 -1276 4870 4631 1698 176 3 7 chr5 179420153 179420442 -23665090 - AluSx SINE Alu -5 307 20 878 175 11 75 chr5 179422069 179422349 -23663183 + AluSx SINE Alu 38 299 -13 25 0 0 0 chr5 179422663 179422688 -23662844 + AT_rich Low_complexity Low_complexity 1 25 0 968 268 29 4 chr5 179423324 179423567 -23661965 - MIR SINE MIR -10 252 4 2243 108 10 0 chr5 179423737 179424044 -23661488 - AluSx SINE Alu -2 310 1 2767 72 55 3 chr5 179424066 179424412 -23661120 + THE1B LTR MaLR 1 364 0 794 198 109 55 chr5 179424515 179424727 -23660805 + MIR SINE MIR 12 240 -22 1699 205 80 3 chr5 179424727 179425063 -23660469 + MLT1A1 LTR MaLR 1 362 -3 794 198 109 55 chr5 179425063 179425088 -23660444 + MIR SINE MIR 240 262 0 180 329 82 12 chr5 179425142 179425227 -23660305 - L2 LINE L2 -10 3262 3172 1999 141 13 10 chr5 179425490 179425796 -23659736 - AluSx SINE Alu -5 307 1 1129 317 181 22 chr5 179425801 179426525 -23659007 + L2 LINE L2 842 1768 -1546 1667 203 0 7 chr5 179426525 179426825 -23658707 + AluJo SINE Alu 3 300 -12 1129 317 181 22 chr5 179426825 179427096 -23658436 + L2 LINE L2 1768 1995 -1319 2253 126 0 0 chr5 179427096 179427405 -23658127 - AluSq SINE Alu -4 309 1 1645 197 130 40 chr5 179427447 179427869 -23657663 - MLT1C LTR MaLR 0 467 8 636 302 62 4 chr5 179427874 179428116 -23657416 + L2 LINE L2 2017 2272 -1042 1009 230 64 0 chr5 179428144 179428386 -23657146 - MIR SINE MIR -1 261 15 * 1167 286 110 57 chr5 179428377 179429154 -23656378 + L2 LINE L2 2258 2993 -320 2233 103 10 0 chr5 179429154 179429454 -23656078 - AluSx SINE Alu -9 303 1 1167 286 110 57 chr5 179429454 179429528 -23656004 + L2 LINE L2 2993 3062 -251 2134 119 3 3 chr5 179429528 179429831 -23655701 - AluSx SINE Alu -9 303 1 1167 286 110 57 chr5 179429831 179429984 -23655548 + L2 LINE L2 3062 3313 0 432 288 7 41 chr5 179430277 179430423 -23655109 - L2 LINE L2 0 3313 3173 723 257 64 39 chr5 179431074 179431339 -23654193 - MER21B LTR ERV1 -45 818 547 304 103 0 0 chr5 179431339 179431378 -23654154 - THE1B LTR MaLR 0 355 317 738 104 130 0 chr5 179431388 179431503 -23654029 - THE1B LTR MaLR -234 130 1 657 252 68 17 chr5 179431504 179431738 -23653794 - MER21B LTR ERV1 -298 565 320 979 249 163 37 chr5 179431876 179432282 -23653250 - MER21B LTR ERV1 -307 556 100 286 196 0 0 chr5 179432536 179432582 -23652950 + polypyrimidine Low_complexity Low_complexity 4 49 0 2197 113 7 7 chr5 179432585 179432981 -23652551 - AluSc SINE Alu 0 396 1 22 56 0 0 chr5 179434127 179434163 -23651369 + AT_rich Low_complexity Low_complexity 1 36 0 2241 89 7 20 chr5 179434382 179434685 -23650847 + AluSg SINE Alu 7 305 -5 183 42 0 0 chr5 179435044 179435068 -23650464 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 300 308 34 99 chr5 179435173 179435505 -23650027 - L2 LINE L2 -245 3068 2727 380 316 146 0 chr5 179435595 179435766 -23649766 - L2 LINE L2 -576 2738 2543 1054 196 28 47 chr5 179435872 179436086 -23649446 - MER63A DNA MER1_type 0 210 1 448 278 117 40 chr5 179437014 179437262 -23648270 - L2 LINE L2 -176 3096 2830 534 204 224 7 chr5 179437275 179437422 -23648110 + MER97b DNA MER1_type? 1 179 -874 1192 223 71 95 chr5 179438202 179438623 -23646909 - MLT2B3 LTR ERVL -10 544 134 26950 95 35 11 chr5 179438623 179441123 -23644409 - HERVL-B3 LTR ERVL -1894 3760 1140 2192 109 0 0 chr5 179441123 179441434 -23644098 - AluSx SINE Alu 0 311 1 26950 95 35 11 chr5 179441434 179442603 -23642929 - HERVL-B3 LTR ERVL -4514 1140 1 2135 209 72 52 chr5 179442603 179443143 -23642389 - MLT2B3 LTR ERVL 0 554 4 1280 203 71 14 chr5 179443968 179444249 -23641283 + AluJo SINE Alu 1 297 -15 204 264 38 0 chr5 179444290 179444343 -23641189 + CT-rich Low_complexity Low_complexity 1 55 0 602 290 116 37 chr5 179444449 179444550 -23640982 - L1ME4a LINE L1 -56 6065 5973 189 0 0 0 chr5 179444550 179444571 -23640961 + (CA)n Simple_repeat Simple_repeat 2 22 0 602 290 116 37 chr5 179444571 179444873 -23640659 - L1ME4a LINE L1 -148 5973 5630 1466 154 140 4 chr5 179444897 179445176 -23640356 - MLT1C LTR MaLR -1 466 150 362 333 84 42 chr5 179445176 179445413 -23640119 - L2 LINE L2 -976 2338 2092 362 284 34 28 chr5 179445665 179445841 -23639691 - L1ME3A LINE L1 -219 5951 5775 234 0 0 0 chr5 179445841 179445867 -23639665 + (TTA)n Simple_repeat Simple_repeat 2 27 0 258 143 0 0 chr5 179445867 179445909 -23639623 - MADE1 DNA Mariner -37 43 2 335 310 35 35 chr5 179445910 179446055 -23639477 - L1ME3A LINE L1 -397 5773 5629 1636 262 55 30 chr5 179446100 179446217 -23639315 + L1ME3A LINE L1 4935 5048 -1122 2149 101 3 17 chr5 179446217 179446514 -23639018 - AluSq SINE Alu -20 293 1 1636 262 55 30 chr5 179446514 179447396 -23638136 + L1ME3A LINE L1 5048 5951 -219 212 265 60 12 chr5 179447564 179447647 -23637885 - L2 LINE L2 -194 3078 2992 3963 172 41 37 chr5 179448309 179449432 -23636100 - L1MB7 LINE L1 -16 6168 5047 246 32 0 0 chr5 179449808 179449839 -23635693 + (TC)n Simple_repeat Simple_repeat 2 32 0 1696 166 3 37 chr5 179449839 179450135 -23635397 - AluJo SINE Alu -26 286 1 1914 150 0 13 chr5 179452004 179452311 -23633221 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 179452808 179452834 -23632698 + AT_rich Low_complexity Low_complexity 1 26 0 775 203 0 7 chr5 179452899 179453042 -23632490 + MER33 DNA MER1_type 5 146 -178 394 236 65 16 chr5 179453572 179453695 -23631837 - MIR SINE MIR -85 177 49 1142 124 28 17 chr5 179454236 179454293 -23631239 - L1MC1 LINE L1 -9 6324 6269 1895 107 0 15 chr5 179454293 179454565 -23630967 + AluSx SINE Alu 1 268 -44 1142 124 28 17 chr5 179454565 179454685 -23630847 - L1MC1 LINE L1 -64 6269 6145 471 118 88 20 chr5 179454685 179454787 -23630745 + MER33 DNA MER1_type 255 363 0 357 286 101 8 chr5 179454787 179454906 -23630626 + MIR SINE MIR 31 160 -102 1725 109 125 48 chr5 179454911 179455224 -23630308 - MER1B DNA MER1_type 0 337 1 2195 110 0 10 chr5 179455960 179456261 -23629271 + AluSc SINE Alu 1 298 -11 1826 171 0 3 chr5 179456328 179456621 -23628911 - AluJo SINE Alu -20 292 1 305 316 0 0 chr5 179457078 179457157 -23628375 + MLT1K LTR MaLR 185 263 -325 203 270 90 22 chr5 179457800 179457889 -23627643 - MIR SINE MIR -63 145 51 23 33 0 0 chr5 179458609 179458639 -23626893 + AT_rich Low_complexity Low_complexity 1 30 0 34 0 0 0 chr5 179458982 179459016 -23626516 + AT_rich Low_complexity Low_complexity 1 34 0 226 280 147 55 chr5 179459950 179460154 -23625378 - MIR SINE MIR -14 248 5 271 282 10 48 chr5 179461535 179461638 -23623894 - MIR SINE MIR -71 191 93 952 129 8 0 chr5 179461882 179462014 -23623518 + AluSq/x SINE Alu 1 133 -180 1661 163 64 7 chr5 179462018 179462313 -23623219 + AluSx SINE Alu 1 312 0 231 291 23 35 chr5 179463210 179463296 -23622236 - MIR SINE MIR -107 155 71 23 0 0 0 chr5 179463799 179463822 -23621710 + AT_rich Low_complexity Low_complexity 1 23 0 562 270 96 7 chr5 179463971 179464201 -23621331 - MIR SINE MIR 0 262 17 344 297 18 45 chr5 179464522 179464633 -23620899 - MIR SINE MIR -71 137 30 316 301 128 15 chr5 179464724 179464857 -23620675 + L2 LINE L2 2557 2704 -610 325 217 0 60 chr5 179466640 179466723 -23618809 - LTR67 LTR ERVL 0 557 480 311 256 51 0 chr5 179467101 179467179 -23618353 - L2 LINE L2 0 3313 3232 350 303 14 28 chr5 179467642 179467784 -23617748 + MIR SINE MIR 81 220 -42 398 259 18 18 chr5 179467963 179468075 -23617457 - MIR SINE MIR -98 164 53 501 314 20 7 chr5 179468191 179468344 -23617188 + MIR SINE MIR 16 170 -92 542 278 212 0 chr5 179468568 179468823 -23616709 + MER102b DNA MER1_type 33 341 0 291 304 113 71 chr5 179469669 179469707 -23615825 - MIR3 SINE MIR -17 191 156 763 225 22 22 chr5 179469707 179469885 -23615647 - MER5B DNA MER1_type 0 178 1 291 304 113 71 chr5 179469885 179470014 -23615518 - MIR3 SINE MIR -52 156 17 1397 235 105 25 chr5 179470036 179470242 -23615290 + MER113 DNA MER1_type? 23 211 -310 2176 117 10 7 chr5 179470242 179470550 -23614982 + AluSc SINE Alu 1 309 0 1397 235 105 25 chr5 179470550 179470782 -23614750 + MER113 DNA MER1_type? 211 496 -25 432 0 0 0 chr5 179471282 179471330 -23614202 + (CA)n Simple_repeat Simple_repeat 2 49 0 460 280 0 25 chr5 179472644 179472762 -23612770 - L2 LINE L2 0 3313 3199 296 320 0 0 chr5 179472763 179472838 -23612694 + L2 LINE L2 3188 3262 -10 23 0 0 0 chr5 179473350 179473373 -23612159 + AT_rich Low_complexity Low_complexity 1 23 0 34 55 0 0 chr5 179473566 179473621 -23611911 + AT_rich Low_complexity Low_complexity 1 55 0 492 18 0 0 chr5 179476394 179476451 -23609081 + (TG)n Simple_repeat Simple_repeat 2 58 0 266 274 10 29 chr5 179479630 179479732 -23605800 + CT-rich Low_complexity Low_complexity 3 102 0 290 258 237 0 chr5 179481504 179481597 -23603935 - L2 LINE L2 -2 3311 3197 198 0 0 0 chr5 179481743 179481765 -23603767 + (TG)n Simple_repeat Simple_repeat 2 23 0 1384 253 55 45 chr5 179481980 179482544 -23602988 - L2 LINE L2 -5 3308 2741 235 284 108 10 chr5 179483968 179484070 -23601462 - MIR SINE MIR -23 239 128 898 60 20 20 chr5 179485298 179485447 -23600085 + (TTTC)n Simple_repeat Simple_repeat 1 149 0 1871 135 0 38 chr5 179485447 179485736 -23599796 - AluJb SINE Alu -34 278 1 1945 142 0 4 chr5 179485917 179486198 -23599334 - AluSx SINE Alu -32 280 1 366 393 8 16 chr5 179488802 179489054 -23596478 - MIR SINE MIR -1 261 12 2130 127 3 0 chr5 179489121 179489421 -23596111 + AluSq SINE Alu 1 301 -12 325 315 77 39 chr5 179489450 179489631 -23595901 - MIR SINE MIR -70 192 5 335 23 23 0 chr5 179489655 179489699 -23595833 + (TAGG)n Simple_repeat Simple_repeat 2 46 0 213 65 0 0 chr5 179490851 179490882 -23594650 + (A)n Simple_repeat Simple_repeat 1 31 0 541 281 7 0 chr5 179492411 179492550 -23592982 + L1ME LINE L1 5615 5754 -367 2018 119 3 52 chr5 179492716 179493044 -23592488 - AluSx SINE Alu 0 312 1 377 275 36 51 chr5 179493316 179493454 -23592078 - MIR SINE MIR -55 153 18 597 152 48 40 chr5 179493816 179493941 -23591591 + AluJb SINE Alu 118 243 -69 1045 150 40 0 chr5 179494504 179494677 -23590855 + AluJb SINE Alu 129 308 -4 236 221 29 150 chr5 179495045 179495185 -23590347 + L3 LINE CR1 437 559 -1018 2380 94 3 0 chr5 179496886 179497194 -23588338 + AluSg SINE Alu 1 309 -1 2554 116 5 47 chr5 179497266 179497361 -23588171 + MLT1B LTR MaLR 1 98 -292 1767 152 6 57 chr5 179497361 179497677 -23587855 - AluJb SINE Alu -12 300 1 2554 116 5 47 chr5 179497677 179497985 -23587547 + MLT1B LTR MaLR 98 387 -3 23 0 0 0 chr5 179498009 179498032 -23587500 + AT_rich Low_complexity Low_complexity 1 23 0 281 288 23 30 chr5 179498094 179498226 -23587306 - L2 LINE L2 -14 3299 3169 262 213 120 27 chr5 179499381 179499456 -23586076 - MIR SINE MIR -96 166 85 1546 279 31 43 chr5 179499460 179499976 -23585556 + MLT1J LTR MaLR 2 511 0 424 250 99 33 chr5 179499994 179500146 -23585386 + MIR SINE MIR 84 245 -17 998 221 97 4 chr5 179501833 179502100 -23583432 - MER33 DNA MER1_type -7 317 26 539 238 70 73 chr5 179502133 179502419 -23583113 + MER102b DNA MER1_type 36 320 -21 737 281 53 20 chr5 179503502 179503748 -23581784 - MIR SINE MIR -1 261 8 283 258 31 21 chr5 179504861 179504958 -23580574 + MIR3 SINE MIR 88 185 -23 223 294 106 0 chr5 179505204 179505289 -23580243 + L2 LINE L2 3153 3246 -26 314 321 7 50 chr5 179505555 179505695 -23579837 + L2 LINE L2 3122 3255 -17 234 0 0 0 chr5 179506935 179506961 -23578571 + (A)n Simple_repeat Simple_repeat 1 26 0 359 237 97 0 chr5 179509394 179509508 -23576024 + MARNA DNA Mariner 275 399 -187 240 243 63 90 chr5 179512198 179512309 -23573223 + L2 LINE L2 2971 3078 -194 309 284 102 24 chr5 179512389 179512516 -23573016 - MER5A DNA MER1_type 0 189 53 242 241 156 99 chr5 179513331 179513472 -23572060 - L2 LINE L2 -5 3308 3160 491 222 19 19 chr5 179513487 179513595 -23571937 + L2 LINE L2 3206 3313 0 407 251 171 34 chr5 179513647 179513822 -23571710 - L2 LINE L2 -261 3052 2854 277 286 62 27 chr5 179513912 179514233 -23571299 + L1ME LINE L1 5254 5582 -584 342 266 31 70 chr5 179514518 179514557 -23570975 + L1ME LINE L1 5646 5685 -436 2098 120 3 13 chr5 179514557 179514856 -23570676 + AluSq SINE Alu 1 296 -17 342 266 31 70 chr5 179514856 179514944 -23570588 + L1ME LINE L1 5685 5768 -353 253 337 30 10 chr5 179515222 179515323 -23570209 + L2 LINE L2 3170 3272 0 2075 124 0 3 chr5 179515775 179516084 -23569448 + AluSx SINE Alu 1 308 0 383 250 152 30 chr5 179517107 179517271 -23568261 - MIR SINE MIR -77 185 2 225 154 0 0 chr5 179519992 179520031 -23565501 + GA-rich Low_complexity Low_complexity 2 40 0 34 0 0 0 chr5 179520188 179520222 -23565310 + AT_rich Low_complexity Low_complexity 1 34 0 489 351 12 6 chr5 179520389 179520557 -23564975 + MIR SINE MIR 2 170 -92 7108 22 7 0 chr5 179521120 179522343 -23563189 + L1PA2 LINE L1 4573 5803 -352 1372 20 0 0 chr5 179522443 179522592 -23562940 + L1PA2 LINE L1 6005 6153 -2 257 279 127 0 chr5 179523618 179523697 -23561835 + MIR SINE MIR 58 146 -116 22 0 0 0 chr5 179524426 179524448 -23561084 + AT_rich Low_complexity Low_complexity 1 22 0 344 296 57 40 chr5 179527021 179527197 -23558335 - MIR3 SINE MIR -2 206 28 220 219 0 0 chr5 179527361 179527402 -23558130 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 179527633 179527662 -23557870 + AT_rich Low_complexity Low_complexity 1 29 0 334 343 46 28 chr5 179527791 179528021 -23557511 - MIR SINE MIR 0 262 23 225 279 98 47 chr5 179528058 179528302 -23557230 + L2 LINE L2 3015 3311 -2 17810 98 7 16 chr5 179579403 179580680 -23504852 - HERVL-B3 LTR ERVL -3228 2426 1179 2192 109 0 0 chr5 179580680 179580991 -23504541 - AluSx SINE Alu 0 311 1 17810 98 7 16 chr5 179580991 179582160 -23503372 - HERVL-B3 LTR ERVL -4475 1179 1 2178 208 72 50 chr5 179582160 179582699 -23502833 - MLT2B3 LTR ERVL 0 554 4 1280 203 71 14 chr5 179583524 179583805 -23501727 + AluJo SINE Alu 1 297 -15 204 264 38 0 chr5 179583846 179583899 -23501633 + CT-rich Low_complexity Low_complexity 1 55 0 602 290 116 37 chr5 179584005 179584106 -23501426 - L1ME4a LINE L1 -56 6065 5973 261 0 0 0 chr5 179584106 179584135 -23501397 + (CA)n Simple_repeat Simple_repeat 2 30 0 602 290 116 37 chr5 179584135 179584437 -23501095 - L1ME4a LINE L1 -148 5973 5630 1466 154 140 4 chr5 179584461 179584740 -23500792 - MLT1C LTR MaLR -1 466 150 371 332 90 41 chr5 179584740 179584984 -23500548 - L2 LINE L2 -976 2338 2083 373 281 34 28 chr5 179585229 179585407 -23500125 - L1ME3A LINE L1 -219 5951 5773 288 0 0 0 chr5 179585408 179585440 -23500092 + (TTA)n Simple_repeat Simple_repeat 2 33 0 258 143 0 0 chr5 179585440 179585482 -23500050 - MADE1 DNA Mariner -37 43 2 335 310 35 35 chr5 179585483 179585628 -23499904 - L1ME3A LINE L1 -397 5773 5629 1636 262 55 30 chr5 179585673 179585790 -23499742 + L1ME3A LINE L1 4935 5048 -1122 2163 98 3 17 chr5 179585790 179586087 -23499445 - AluSq SINE Alu -20 293 1 1636 262 55 30 chr5 179586087 179586969 -23498563 + L1ME3A LINE L1 5048 5951 -219 212 265 60 12 chr5 179587137 179587220 -23498312 - L2 LINE L2 -194 3078 2992 3931 174 41 34 chr5 179587882 179589006 -23496526 - L1MB7 LINE L1 -16 6168 5047 246 32 0 0 chr5 179589382 179589413 -23496119 + (TC)n Simple_repeat Simple_repeat 2 32 0 1670 169 3 37 chr5 179589413 179589709 -23495823 - AluJo SINE Alu -26 286 1 1900 153 0 13 chr5 179591578 179591885 -23493647 + AluJo SINE Alu 1 303 -9 26 0 0 0 chr5 179592382 179592408 -23493124 + AT_rich Low_complexity Low_complexity 1 26 0 775 203 0 7 chr5 179592473 179592616 -23492916 + MER33 DNA MER1_type 5 146 -178 394 236 65 16 chr5 179593146 179593269 -23492263 - MIR SINE MIR -85 177 49 1142 124 28 17 chr5 179593810 179593867 -23491665 - L1MC1 LINE L1 -9 6324 6269 1895 107 0 15 chr5 179593867 179594139 -23491393 + AluSx SINE Alu 1 268 -44 1142 124 28 17 chr5 179594139 179594259 -23491273 - L1MC1 LINE L1 -64 6269 6145 471 118 88 20 chr5 179594259 179594361 -23491171 + MER33 DNA MER1_type 216 324 0 364 286 101 8 chr5 179594361 179594480 -23491052 + MIR SINE MIR 31 160 -102 1725 109 125 48 chr5 179594485 179594798 -23490734 - MER1B DNA MER1_type 0 337 1 1174 98 0 18 chr5 179595534 179595697 -23489835 + AluSg SINE Alu 1 160 -150 26 0 0 0 chr5 179595797 179595823 -23489709 + AT_rich Low_complexity Low_complexity 1 26 0 1826 171 0 3 chr5 179595876 179596169 -23489363 - AluJo SINE Alu -20 292 1 305 316 0 0 chr5 179596626 179596705 -23488827 + MLT1K LTR MaLR 185 263 -325 203 270 90 22 chr5 179597348 179597437 -23488095 - MIR SINE MIR -63 145 51 2196 98 3 3 chr5 179598175 179598470 -23487062 - AluSq SINE Alu -18 295 1 223 192 19 0 chr5 179598613 179598665 -23486867 + T-rich Low_complexity Low_complexity 2 54 0 1349 248 51 17 chr5 179598702 179599057 -23486475 + L1MDa LINE L1 2 368 -6172 2245 203 86 37 chr5 179599058 179599306 -23486226 + MER68 LTR ERV1 1 236 -326 2274 123 29 29 chr5 179599306 179599681 -23485851 + THE1C LTR MaLR 1 375 0 2245 203 86 37 chr5 179599681 179599968 -23485564 + MER68 LTR ERV1 236 562 0 778 286 48 0 chr5 179599968 179600199 -23485333 + L1MDa LINE L1 365 606 -5934 248 255 149 21 chr5 179600199 179600293 -23485239 + LTR8 LTR ERV1 21 126 -565 1314 224 57 18 chr5 179600352 179600687 -23484845 + MER87 LTR ERV1 194 541 0 3734 186 100 42 chr5 179600691 179601752 -23483780 + L1MDa LINE L1 859 1981 -4559 2473 206 13 46 chr5 179601752 179602275 -23483257 + MLT2B3 LTR ERVL 1 506 -48 1049 184 13 87 chr5 179602275 179602585 -23482947 + L1MDa LINE L1 2271 2557 -3983 1858 203 49 9 chr5 179602585 179603130 -23482402 + L1MD2 LINE L1 5708 7795 -13 58 70 0 0 chr5 179603130 179603244 -23482288 + AT_rich Low_complexity Low_complexity 1 114 0 1312 206 46 28 chr5 179603330 179603612 -23481920 + AluJb SINE Alu 6 292 -20 1409 217 64 12 chr5 179604012 179604339 -23481193 - MER2 DNA MER2_type 0 344 1 310 244 49 24 chr5 179604373 179604455 -23481077 - L2 LINE L2 0 3313 3230 1939 134 47 33 chr5 179604480 179604839 -23480693 + THE1C LTR MaLR 1 364 -11 319 279 210 54 chr5 179604983 179605373 -23480159 - L2 LINE L2 -1620 1694 1244 204 40 0 0 chr5 179607028 179607053 -23478479 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 872 231 85 142 chr5 179607452 179607517 -23478015 - MLT1E LTR MaLR -165 489 422 1131 105 216 5 chr5 179607517 179607613 -23477919 - MER30 DNA MER1_type 0 230 155 321 26 0 0 chr5 179607613 179607651 -23477881 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1131 105 216 5 chr5 179607651 179607744 -23477788 - MER30 DNA MER1_type -75 155 1 872 231 85 142 chr5 179607744 179608076 -23477456 - MLT1E LTR MaLR -232 422 1 2351 110 3 0 chr5 179608119 179608429 -23477103 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr5 179608432 179608455 -23477077 + AT_rich Low_complexity Low_complexity 1 23 0 454 121 0 0 chr5 179608596 179608654 -23476878 + AluS SINE Alu 5 62 -256 1797 139 69 10 chr5 179608784 179609087 -23476445 + Tigger1 DNA MER2_type 2098 2418 0 1574 150 10 72 chr5 179609617 179609923 -23475609 - AluJo SINE Alu -20 292 6 538 222 0 9 chr5 179610253 179610361 -23475171 - AluJb SINE Alu -204 108 2 2141 128 0 0 chr5 179610514 179610804 -23474728 - AluSx SINE Alu -22 290 1 2360 112 3 0 chr5 179610810 179611122 -23474410 - AluSp SINE Alu 0 313 1 1145 68 0 0 chr5 179611122 179611254 -23474278 - AluSq/x SINE Alu -177 135 4 519 257 95 0 chr5 179611618 179611766 -23473766 - MIR SINE MIR -78 184 23 265 196 36 0 chr5 179611767 179611823 -23473709 + L1 LINE L1 5191 5248 -898 273 161 9 23 chr5 179611953 179612011 -23473521 - L1M LINE L1 -804 5366 5310 823 139 16 8 chr5 179612011 179612133 -23473399 - FLAM_C SINE Alu -10 123 1 273 161 9 23 chr5 179612133 179612161 -23473371 - L1M LINE L1 -860 5310 5283 1818 160 3 3 chr5 179612177 179612465 -23473067 - AluJb SINE Alu -24 288 1 2306 78 3 0 chr5 179612502 179612786 -23472746 - AluSp SINE Alu -13 300 16 2342 100 0 0 chr5 179612876 179613176 -23472356 - AluSx SINE Alu -12 300 1 2067 109 7 7 chr5 179613541 179613824 -23471708 - AluSx SINE Alu -29 283 1 259 290 29 0 chr5 179614254 179614323 -23471209 - MIR SINE MIR -6 256 186 1667 180 108 27 chr5 179615530 179615902 -23469630 - MLT2B1 LTR ERVL -118 402 1 634 223 17 86 chr5 179615903 179615995 -23469537 + MLT1E LTR MaLR 390 466 -127 2311 100 0 3 chr5 179615995 179616294 -23469238 + AluY SINE Alu 2 299 -12 634 223 17 86 chr5 179616294 179616376 -23469156 + MLT1E LTR MaLR 466 552 -41 980 177 31 92 chr5 179616410 179616654 -23468878 - L1ME3A LINE L1 -27 6143 5914 2074 133 0 23 chr5 179616654 179616954 -23468578 + AluSx SINE Alu 1 293 -19 980 177 31 92 chr5 179616954 179616969 -23468563 - L1ME3A LINE L1 -256 5914 5900 1245 135 0 0 chr5 179617151 179617329 -23468203 - AluSg/x SINE Alu 0 310 133 1610 145 91 14 chr5 179617629 179617905 -23467627 + AluJo SINE Alu 1 297 -15 225 0 0 0 chr5 179617953 179617978 -23467554 + (A)n Simple_repeat Simple_repeat 1 25 0 1575 157 108 0 chr5 179618714 179618982 -23466550 + AluJb SINE Alu 1 297 -15 1085 115 26 42 chr5 179618982 179619164 -23466368 - L1 LINE L1 -1407 4739 4559 45 0 0 0 chr5 179619362 179619407 -23466125 + AT_rich Low_complexity Low_complexity 1 45 0 1979 115 7 4 chr5 179619524 179619831 -23465701 - AluSx SINE Alu 0 310 3 219 241 35 0 chr5 179619858 179619916 -23465616 + MIR SINE MIR 73 132 -130 1736 169 10 70 chr5 179620049 179620207 -23465325 - L1MD2 LINE L1 -184 6175 6009 2175 118 3 0 chr5 179620207 179620503 -23465029 - AluSx SINE Alu -15 297 1 1736 169 10 70 chr5 179620503 179620741 -23464791 - L1MD2 LINE L1 -350 6009 5803 1117 134 13 0 chr5 179620843 179621000 -23464532 - AluSx SINE Alu -153 159 1 1116 89 179 45 chr5 179621756 179621957 -23463575 + AluSg/x SINE Alu 85 309 0 249 317 63 35 chr5 179621959 179622101 -23463431 + MER5A DNA MER1_type 4 149 -40 706 161 51 0 chr5 179622488 179622606 -23462926 - FLAM_C SINE Alu -18 125 2 877 158 0 0 chr5 179622665 179622798 -23462734 - AluSg/x SINE Alu -13 297 165 1440 170 5 0 chr5 179623410 179623634 -23461898 - Charlie3 DNA MER1_type -2485 225 1 347 137 0 0 chr5 179623681 179623732 -23461800 + AluSx SINE Alu 1 51 -248 1909 116 0 4 chr5 179623908 179624158 -23461374 + AluSx SINE Alu 42 290 -22 26 0 0 0 chr5 179624158 179624184 -23461348 + AT_rich Low_complexity Low_complexity 1 26 0 333 75 0 0 chr5 179624249 179624289 -23461243 + AluJ/FLAM SINE Alu 60 99 -203 875 314 49 31 chr5 179624298 179624751 -23460781 - L2 LINE L2 -47 3266 2806 857 211 6 0 chr5 179624819 179624980 -23460552 + FRAM SINE Alu 1 162 -14 238 220 11 11 chr5 179625115 179625206 -23460326 + (TGGA)n Simple_repeat Simple_repeat 1 91 0 373 158 0 0 chr5 179625334 179625391 -23460141 + AluS SINE Alu 1 57 -244 704 65 97 0 chr5 179625531 179625624 -23459908 - AluSq/x SINE Alu -210 103 2 678 215 45 6 chr5 179625631 179625808 -23459724 - L1M4 LINE L1 -1034 5112 4929 1779 109 113 7 chr5 179625814 179626089 -23459443 - AluSg1 SINE Alu -5 304 1 311 0 0 25 chr5 179626091 179626131 -23459401 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2171 100 7 0 chr5 179626131 179626412 -23459120 - AluSx SINE Alu -29 283 1 290 267 13 13 chr5 179626417 179626492 -23459040 - L2 LINE L2 -13 3259 3185 1547 124 5 0 chr5 179626911 179627128 -23458404 + AluSq SINE Alu 1 218 -95 192 77 0 0 chr5 179627142 179627168 -23458364 + (A)n Simple_repeat Simple_repeat 1 26 0 244 122 49 0 chr5 179627172 179627213 -23458319 - MIR SINE MIR -110 152 110 1586 145 50 34 chr5 179627274 179627536 -23457996 - AluJb SINE Alu -45 267 2 312 48 0 0 chr5 179627546 179627588 -23457944 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2859 164 9 0 chr5 179629032 179629484 -23456048 + Tigger1 DNA MER2_type 1 456 -1962 1292 102 37 33 chr5 179629474 179629689 -23455843 + Tigger1 DNA MER2_type 583 798 -1620 * 280 215 15 32 chr5 179629843 179629972 -23455560 + MIR SINE MIR 87 249 -13 * 476 302 124 35 chr5 179629970 179630478 -23455054 - L2 LINE L2 0 3313 2745 230 323 11 21 chr5 179630866 179630959 -23454573 - L2 LINE L2 -94 3178 3087 1207 148 0 0 chr5 179631068 179631244 -23454288 - AluSg/x SINE Alu -8 302 127 1949 76 0 0 chr5 179631377 179631614 -23453918 + AluY SINE Alu 66 302 -9 2257 112 0 0 chr5 179631614 179631919 -23453613 + AluSg SINE Alu 1 305 -5 1248 124 0 6 chr5 179631919 179632097 -23453435 + AluSc SINE Alu 132 308 -1 219 218 0 0 chr5 179632113 179632168 -23453364 + GA-rich Low_complexity Low_complexity 2 56 0 797 158 0 0 chr5 179632188 179632308 -23453224 + FLAM_C SINE Alu 1 120 -13 978 93 12 12 chr5 179632315 179632477 -23453055 + (GAAA)n Simple_repeat Simple_repeat 1 162 0 1856 122 45 48 chr5 179633065 179633233 -23452299 - AluJo SINE Alu -2 310 142 2351 92 3 3 chr5 179633233 179633537 -23451995 - AluSq SINE Alu -8 305 2 1856 122 45 48 chr5 179633537 179633679 -23451853 - AluJo SINE Alu -170 142 1 2283 117 0 16 chr5 179634051 179634368 -23451164 - AluSx SINE Alu 0 312 1 2634 177 6 18 chr5 179634408 179634916 -23450616 + L1 LINE L1 4533 5034 -1112 1292 91 0 11 chr5 179634931 179635106 -23450426 + AluSq SINE Alu 141 313 0 1155 141 25 10 chr5 179635106 179635222 -23450310 + L1P5 LINE L1 5488 5610 -546 2079 131 7 3 chr5 179635222 179635512 -23450020 + AluSq SINE Alu 1 291 -22 1155 141 25 10 chr5 179635512 179635594 -23449938 + L1P5 LINE L1 5610 5689 -467 1941 161 52 3 chr5 179635803 179636151 -23449381 - MLT1A1 LTR MaLR 0 365 1 190 265 0 41 chr5 179636267 179636316 -23449216 + MER5A DNA MER1_type 143 189 0 1368 170 118 66 chr5 179636583 179636930 -23448602 + MLT1A1 LTR MaLR 1 365 0 653 281 98 58 chr5 179636930 179637610 -23447922 - L2 LINE L2 -226 3087 2374 2485 71 0 0 chr5 179639055 179639350 -23446182 - AluSg SINE Alu -15 295 1 228 234 0 0 chr5 179641108 179641155 -23444377 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 572 186 93 58 chr5 179642034 179642206 -23443326 - MER5A DNA MER1_type -4 185 8 1686 165 54 7 chr5 179643092 179643389 -23442143 - AluJo SINE Alu -1 311 1 1916 147 25 3 chr5 179646855 179647140 -23438392 + AluJb SINE Alu 1 291 -21 372 212 92 49 chr5 179647554 179647738 -23437794 - MER112 DNA MER1_type -1 259 68 2595 64 0 3 chr5 179647765 179648077 -23437455 - AluY SINE Alu 0 311 1 2211 114 0 0 chr5 179649044 179649342 -23436190 + AluSg SINE Alu 1 298 -12 366 261 115 23 chr5 179649342 179649472 -23436060 - MLT1G LTR MaLR -447 143 2 1745 168 7 10 chr5 179649472 179649769 -23435763 + AluSq SINE Alu 1 296 -17 718 305 19 16 chr5 179650192 179650510 -23435022 - L1MC4a LINE L1 -1885 5923 5605 2086 119 31 0 chr5 179650869 179651163 -23434369 + AluSg SINE Alu 1 303 -7 2160 112 3 7 chr5 179651173 179651460 -23434072 + AluSx SINE Alu 1 286 -26 326 61 0 3 chr5 179651670 179651728 -23433804 - AluSp/q SINE Alu 0 303 256 362 135 0 0 chr5 179651892 179651944 -23433588 - Alu SINE Alu -7 295 244 1471 169 27 37 chr5 179651968 179652282 -23433250 - AluJb SINE Alu 0 312 1 447 82 66 0 chr5 179652399 179652460 -23433072 - U6 snRNA snRNA -42 65 1 1922 143 18 3 chr5 179653534 179653820 -23431712 - AluSc SINE Alu -19 290 1 4280 113 24 6 chr5 179653822 179654453 -23431079 - Tigger1 DNA MER2_type -938 1480 839 1223 133 0 0 chr5 179654616 179654789 -23430743 + AluSg/x SINE Alu 138 310 0 2216 109 3 0 chr5 179654795 179655088 -23430444 + AluSg SINE Alu 6 299 -11 217 310 127 7 chr5 179655197 179655339 -23430193 + L3 LINE CR1 1346 1504 -73 1018 126 19 0 chr5 179655505 179655664 -23429868 + L1M1 LINE L1 5588 5749 -551 780 152 110 0 chr5 179655664 179655809 -23429723 + THE1C LTR MaLR 1 161 -214 2295 96 7 0 chr5 179655809 179656111 -23429421 - AluSx SINE Alu -7 305 2 807 98 7 92 chr5 179656112 179656160 -23429372 + MER41A LTR ERV1 415 465 -89 2039 119 6 55 chr5 179656160 179656488 -23429044 + AluSq SINE Alu 1 312 -1 807 98 7 92 chr5 179656488 179656592 -23428940 + MER41A LTR ERV1 465 554 0 358 82 0 0 chr5 179656779 179656828 -23428704 - Alu SINE Alu -254 49 1 1928 103 40 11 chr5 179658855 179659128 -23426404 - AluSx SINE Alu -11 301 21 1540 100 14 9 chr5 179659250 179659470 -23426062 - AluSx SINE Alu -91 221 1 863 141 0 15 chr5 179659530 179659665 -23425867 - FLAM_C SINE Alu 0 133 1 2139 100 21 0 chr5 179659727 179660033 -23425499 - AluSq SINE Alu 0 312 1 198 0 0 0 chr5 179660361 179660383 -23425149 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1003 80 0 0 chr5 179660389 179660514 -23425018 - AluSg/x SINE Alu -31 281 157 1747 146 0 8 chr5 179660516 179660784 -23424748 + AluJb SINE Alu 30 295 -17 2226 119 0 7 chr5 179660861 179661171 -23424361 + AluSx SINE Alu 1 308 -4 1514 161 52 46 chr5 179661300 179661605 -23423927 + AluJo SINE Alu 1 307 -5 628 112 0 0 chr5 179661608 179661697 -23423835 + AluY SINE Alu 2 90 -221 1356 145 35 93 chr5 179662204 179662514 -23423018 - AluJo SINE Alu -20 292 1 459 202 0 0 chr5 179664963 179665062 -23420470 + (TA)n Simple_repeat Simple_repeat 1 99 0 260 241 35 0 chr5 179666489 179666547 -23418985 - L2 LINE L2 -8 3264 3205 229 211 158 0 chr5 179667199 179667256 -23418276 - MIR SINE MIR -140 122 57 2328 106 0 0 chr5 179667537 179667838 -23417694 + AluY SINE Alu 1 301 -10 243 246 35 0 chr5 179667855 179667912 -23417620 + MIR3 SINE MIR 100 158 -50 334 238 12 12 chr5 179667998 179668078 -23417454 - MER117 DNA MER1_type -104 93 14 409 289 80 49 chr5 179668188 179668276 -23417256 + MIR SINE MIR 19 103 -159 2062 128 6 34 chr5 179668276 179668597 -23416935 - AluSx SINE Alu 0 312 1 409 289 80 49 chr5 179668597 179668733 -23416799 + MIR SINE MIR 103 250 -12 293 253 107 0 chr5 179668848 179668923 -23416609 - L2 LINE L2 -51 3221 3139 666 165 76 57 chr5 179669028 179669186 -23416346 + MER20 DNA MER1_type 18 178 -41 2323 89 13 3 chr5 179669189 179669491 -23416041 + AluSq SINE Alu 1 305 -8 336 310 63 7 chr5 179669807 179669949 -23415583 - Charlie8 DNA MER1_type -2265 152 3 2128 124 0 3 chr5 179669969 179670275 -23415257 - AluSg1 SINE Alu -2 307 3 1722 176 3 13 chr5 179670277 179670578 -23414954 - AluJo SINE Alu -8 304 7 1003 232 171 43 chr5 179671396 179671771 -23413761 + MLT1K LTR MaLR 4 426 -162 289 224 0 82 chr5 179671800 179671898 -23413634 + MLT1K LTR MaLR 411 500 -88 401 243 108 39 chr5 179672113 179672377 -23413155 + MER34 LTR ERV1 353 538 -4 4102 126 19 9 chr5 179672597 179673226 -23412306 - MER41B LTR ERV1 0 635 1 311 304 17 55 chr5 179673507 179673688 -23411844 - L2 LINE L2 -228 3044 2871 1522 94 14 9 chr5 179674024 179674236 -23411296 - AluSg SINE Alu -96 214 2 380 194 15 0 chr5 179674240 179674307 -23411225 - MER81 DNA DNA -36 78 11 2132 101 4 0 chr5 179674686 179675003 -23410529 - AluSp SINE Alu 0 322 5 625 183 0 0 chr5 179675070 179675174 -23410358 + FLAM_A SINE Alu 6 109 -33 1899 154 0 7 chr5 179675176 179675501 -23410031 - AluSq SINE Alu 0 323 1 604 259 95 20 chr5 179676125 179676419 -23409113 - L1MC4 LINE L1 -34 8008 7693 555 201 231 26 chr5 179676482 179676751 -23408781 - L1MC4a LINE L1 -342 7466 7143 601 208 143 89 chr5 179676765 179676919 -23408613 - AluJo SINE Alu -1 311 167 1961 103 62 3 chr5 179676919 179677209 -23408323 - AluSq SINE Alu -6 307 1 2158 120 3 0 chr5 179677212 179677512 -23408020 - AluSq SINE Alu -12 301 1 601 208 143 89 chr5 179677512 179677633 -23407899 - AluJo SINE Alu -146 166 18 2245 151 99 62 chr5 179677659 179677977 -23407555 - L1MB2 LINE L1 -1 6170 5820 2058 142 3 0 chr5 179677977 179678272 -23407260 - AluSx SINE Alu -16 296 1 2245 151 99 62 chr5 179678272 179678521 -23407011 - L1MB2 LINE L1 -351 5820 5582 938 109 0 29 chr5 179678719 179678856 -23406676 - FLAM_C SINE Alu 0 133 1 1022 63 0 0 chr5 179678898 179679025 -23406507 - AluSp/q SINE Alu -2 311 185 2256 92 7 3 chr5 179679578 179679872 -23405660 + AluSx SINE Alu 1 295 -17 750 190 0 0 chr5 179679875 179679991 -23405541 - AluJo/FLAM SINE Alu -195 117 2 449 164 0 0 chr5 179680064 179680131 -23405401 - AluJ/FRAM SINE Alu -18 294 228 2372 88 16 0 chr5 179680237 179680544 -23404988 + AluSq SINE Alu 1 312 -1 264 260 14 14 chr5 179680544 179680617 -23404915 - MIR SINE MIR -159 103 31 189 300 62 38 chr5 179680632 179680712 -23404820 - MIR SINE MIR -160 102 21 2056 115 25 4 chr5 179680750 179681028 -23404504 + AluSq SINE Alu 1 284 -29 3144 30 3 0 chr5 179681153 179681520 -23404012 - L1PA4 LINE L1 -3 6152 5785 586 267 18 68 chr5 179681584 179681733 -23403799 - MIR SINE MIR 0 262 126 2175 118 0 3 chr5 179681733 179682030 -23403502 + AluSg SINE Alu 1 296 -14 586 267 18 68 chr5 179682030 179682101 -23403431 - MIR SINE MIR -136 126 53 184 326 50 28 chr5 179682120 179682261 -23403271 + MER5A DNA MER1_type 42 185 -4 2009 101 33 59 chr5 179682469 179682776 -23402756 - AluSq SINE Alu -12 301 3 2317 68 11 0 chr5 179682964 179683281 -23402251 - AluY SINE Alu 0 320 1 22 0 0 0 chr5 179684112 179684134 -23401398 + AT_rich Low_complexity Low_complexity 1 22 0 4139 152 5 2 chr5 179684137 179684770 -23400762 + MER41B LTR ERV1 1 635 0 1226 173 34 0 chr5 179685398 179685606 -23399926 - AluJb SINE Alu -13 299 85 509 312 27 5 chr5 179686422 179686608 -23398924 + MIR3 SINE MIR 1 190 -18 2141 134 0 0 chr5 179686775 179687073 -23398459 + AluSx SINE Alu 1 298 -14 477 211 9 9 chr5 179687073 179687182 -23398350 + L1MB4 LINE L1 6014 6122 -58 1419 183 50 0 chr5 179687182 179687392 -23398140 + Tigger3(Golem) DNA MER2_type 1 228 -2801 2125 134 7 7 chr5 179687392 179687699 -23397833 + AluSx SINE Alu 1 307 -5 1419 183 50 0 chr5 179687699 179687750 -23397782 + Tigger3(Golem) DNA MER2_type 228 275 -2754 227 104 21 0 chr5 179687886 179687934 -23397598 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 527 224 8 0 chr5 179687934 179688059 -23397473 + Charlie5 DNA MER1_type 2460 2585 -27 1615 119 0 0 chr5 179688080 179688290 -23397242 + AluSq SINE Alu 1 210 -103 198 0 0 0 chr5 179688304 179688326 -23397206 + (A)n Simple_repeat Simple_repeat 1 22 0 1440 184 0 81 chr5 179688369 179688509 -23397023 + AluJo SINE Alu 1 102 -210 2309 100 0 0 chr5 179688509 179688798 -23396734 - AluSq SINE Alu -23 290 2 1440 184 0 81 chr5 179688798 179688978 -23396554 + AluJo SINE Alu 102 295 -17 1591 174 99 0 chr5 179689204 179689515 -23396017 + AluJo SINE Alu 1 339 0 1998 145 0 3 chr5 179689563 179689853 -23395679 - AluSx SINE Alu -23 289 1 2189 99 7 10 chr5 179690207 179690510 -23395022 + AluSx SINE Alu 1 302 -10 201 295 152 9 chr5 179691214 179691319 -23394213 + MIR SINE MIR 20 139 -123 469 175 0 12 chr5 179691499 179691579 -23393953 + AluJb SINE Alu 2 80 -232 395 112 0 10 chr5 179691580 179691760 -23393772 + AluSq SINE Alu 1 250 -53 1143 157 14 37 chr5 179691760 179691977 -23393555 + AluJb SINE Alu 85 296 -16 343 129 40 105 chr5 179691999 179692123 -23393409 + L1ME4a LINE L1 5988 6103 -18 550 268 110 7 chr5 179692737 179693062 -23392470 - LTR16B LTR ERVL 0 464 72 181 267 0 0 chr5 179694094 179694139 -23391393 + L3 LINE CR1 1397 1441 -136 1716 158 7 7 chr5 179694222 179694495 -23391037 - AluJo SINE Alu -39 273 1 754 190 0 0 chr5 179694800 179694921 -23390611 - FLAM_C SINE Alu -21 122 2 2333 103 0 0 chr5 179694947 179695249 -23390283 - AluSx SINE Alu -10 302 1 470 256 0 8 chr5 179695250 179695367 -23390165 + MIR SINE MIR 121 236 -26 378 298 53 47 chr5 179695402 179695573 -23389959 - MIR SINE MIR -70 192 21 187 235 0 0 chr5 179695839 179695890 -23389642 - MIR SINE MIR -13 249 199 319 240 185 59 chr5 179695899 179696259 -23389273 - MLT1K LTR MaLR -8 580 144 188 188 156 31 chr5 179696417 179696481 -23389051 - MIR SINE MIR -108 154 83 2144 127 0 0 chr5 179696483 179696775 -23388757 + AluSx SINE Alu 1 292 -20 36 0 0 0 chr5 179696778 179696814 -23388718 + AT_rich Low_complexity Low_complexity 1 36 0 1738 153 41 0 chr5 179696827 179697095 -23388437 + AluJo SINE Alu 2 280 -32 1855 171 13 0 chr5 179698275 179698573 -23386959 + AluJb SINE Alu 1 302 -10 2385 85 3 0 chr5 179698740 179699035 -23386497 - AluSx SINE Alu -16 296 1 558 178 10 20 chr5 179699041 179699142 -23386390 - AluJo/FRAM SINE Alu -21 291 192 1765 144 23 4 chr5 179699142 179699405 -23386127 - AluSx SINE Alu -44 268 1 21 0 0 0 chr5 179699509 179699530 -23386002 + AT_rich Low_complexity Low_complexity 1 21 0 1513 184 65 16 chr5 179699822 179700132 -23385400 - MER58B DNA MER1_type -8 333 9 1689 91 0 0 chr5 179700239 179700448 -23385084 - AluSg/x SINE Alu -19 291 83 2244 95 17 10 chr5 179700746 179701040 -23384492 + AluSq SINE Alu 1 296 -17 2196 94 52 0 chr5 179701042 179701328 -23384204 + AluSx SINE Alu 1 301 -11 2429 54 0 0 chr5 179701332 179701691 -23383841 + AluY SINE Alu 2 360 0 194 212 242 0 chr5 179701738 179701804 -23383728 + MIR SINE MIR 83 164 -98 2113 143 0 3 chr5 179701827 179702127 -23383405 - AluSx SINE Alu -13 299 1 2324 104 10 0 chr5 179702157 179702464 -23383068 - AluSx SINE Alu -2 310 1 2137 89 3 54 chr5 179702466 179702781 -23382751 - AluSx SINE Alu -13 299 1 576 211 38 72 chr5 179702781 179702862 -23382670 - MER33 DNA MER1_type -2363 222 140 1821 154 3 16 chr5 179702862 179703168 -23382364 - AluJb SINE Alu -10 302 1 576 211 38 72 chr5 179703168 179703295 -23382237 - MER33 DNA MER1_type -2445 140 21 1846 191 56 27 chr5 179703413 179703827 -23381705 + L1PA16 LINE L1 5729 6154 -12 2281 105 3 0 chr5 179703842 179704137 -23381395 - AluSp SINE Alu -17 296 1 510 17 0 0 chr5 179705041 179705100 -23380432 + (CA)n Simple_repeat Simple_repeat 1 59 0 326 91 18 0 chr5 179705100 179705155 -23380377 + (TC)n Simple_repeat Simple_repeat 1 56 0 428 138 31 0 chr5 179705244 179705309 -23380223 - AluSc SINE Alu -115 194 128 2304 113 0 0 chr5 179705309 179705619 -23379913 - AluSg SINE Alu 0 310 1 862 322 62 23 chr5 179705639 179706123 -23379409 + L2 LINE L2 1706 2208 -1106 372 156 0 156 chr5 179706123 179706251 -23379281 + L1MA8 LINE L1 6179 6286 -5 2296 107 0 0 chr5 179706310 179706601 -23378931 + AluSg SINE Alu 1 291 -19 1304 309 60 14 chr5 179706718 179707268 -23378264 + L2 LINE L2 2237 2811 -503 486 283 166 21 chr5 179707323 179707648 -23377884 + L2 LINE L2 2942 3313 0 2224 113 0 25 chr5 179707712 179708032 -23377500 - AluSx SINE Alu 0 312 1 2312 93 0 3 chr5 179708032 179708323 -23377209 - AluSx SINE Alu -22 290 1 857 164 0 8 chr5 179708325 179708459 -23377073 - AluJo/FLAM SINE Alu -179 133 1 2152 97 19 16 chr5 179708565 179708874 -23376658 - AluSg SINE Alu 0 310 1 382 141 28 28 chr5 179708874 179708945 -23376587 - AluJb SINE Alu -157 145 75 1042 107 0 27 chr5 179708945 179709095 -23376437 - AluSg/x SINE Alu -8 304 159 1409 158 54 47 chr5 179709318 179709597 -23375935 + AluJo SINE Alu 11 291 -21 617 231 98 102 chr5 179709617 179709942 -23375590 - Charlie1b DNA MER1_type -199 324 1 2141 133 0 0 chr5 179710449 179710743 -23374789 + AluSx SINE Alu 1 294 -18 256 231 154 108 chr5 179710773 179711186 -23374346 + MARNA DNA Mariner 48 183 -403 260 213 0 111 chr5 179710825 179710872 -23374660 - MARNA DNA Mariner -117 469 439 2151 102 18 0 chr5 179710872 179711156 -23374376 + AluSx SINE Alu 1 289 -23 260 213 0 111 chr5 179711156 179711216 -23374316 - MARNA DNA Mariner -147 439 374 1794 122 31 38 chr5 179711560 179711848 -23373684 + AluJb SINE Alu 7 292 -20 937 111 0 16 chr5 179712130 179712256 -23373276 + FLAM_C SINE Alu 1 124 -19 1860 156 0 19 chr5 179712737 179713052 -23372480 + AluJo SINE Alu 1 309 -3 780 242 44 66 chr5 179713479 179713752 -23371780 - AluJo SINE Alu -44 268 2 362 179 0 0 chr5 179714068 179714124 -23371408 + AluSp SINE Alu 137 192 -111 922 70 9 0 chr5 179714124 179714238 -23371294 - AluSq/x SINE Alu -198 115 1 1576 192 21 10 chr5 179714322 179714613 -23370919 - AluJo SINE Alu -18 294 1 2117 133 0 0 chr5 179714730 179715031 -23370501 + AluSx SINE Alu 1 301 -11 2421 89 0 0 chr5 179715044 179715346 -23370186 + AluSg SINE Alu 1 302 -8 292 167 0 0 chr5 179715550 179715592 -23369940 + Alu SINE Alu 1 42 -260 1387 102 6 0 chr5 179715626 179715822 -23369710 + AluSq SINE Alu 107 303 0 1957 152 0 7 chr5 179716118 179716415 -23369117 + AluJb SINE Alu 1 295 -17 592 263 121 26 chr5 179716485 179716717 -23368815 + MIR SINE MIR 9 262 0 2824 10 0 0 chr5 179718386 179718686 -23366846 - AluY SINE Alu -11 300 1 2256 83 10 3 chr5 179719319 179719609 -23365923 + AluSq SINE Alu 11 302 -11 1491 66 42 87 chr5 179720134 179720375 -23365157 + AluSc SINE Alu 79 308 -1 611 102 0 0 chr5 179720497 179720585 -23364947 + AluSg/x SINE Alu 214 301 -9 349 307 98 20 chr5 179721062 179721215 -23364317 + MIR SINE MIR 66 230 -32 2195 118 3 10 chr5 179721611 179721917 -23363615 - AluSx SINE Alu -8 304 1 1878 134 67 0 chr5 179722527 179722811 -23362721 + AluSq SINE Alu 1 303 -10 26 30 0 0 chr5 179722864 179722897 -23362635 + AT_rich Low_complexity Low_complexity 1 33 0 738 177 8 0 chr5 179723645 179723769 -23361763 - FLAM_C SINE Alu -8 125 1 2148 141 0 0 chr5 179723776 179724075 -23361457 - AluSx SINE Alu -13 299 1 419 15 59 0 chr5 179724564 179724632 -23360900 + (TA)n Simple_repeat Simple_repeat 2 73 0 316 264 115 0 chr5 179724632 179724775 -23360757 + L1MC5 LINE L1 7415 7574 -387 2233 115 0 10 chr5 179724809 179725113 -23360419 - AluSx SINE Alu -11 301 1 2200 89 7 10 chr5 179725113 179725269 -23360263 - AluSq SINE Alu -22 291 135 2192 124 0 3 chr5 179725269 179725575 -23359957 - AluSg SINE Alu -5 305 1 2200 89 7 10 chr5 179725575 179725710 -23359822 - AluSq SINE Alu -178 135 1 2237 100 3 3 chr5 179725998 179726287 -23359245 + AluSc SINE Alu 6 294 -15 905 150 0 0 chr5 179726400 179726527 -23359005 + AluSq/x SINE Alu 3 129 -183 1451 150 12 12 chr5 179726531 179726778 -23358754 + AluYb8 SINE Alu 5 251 -67 2388 83 7 0 chr5 179726778 179727067 -23358465 + AluY SINE Alu 10 301 -10 1765 159 11 7 chr5 179727093 179727376 -23358156 + AluJo SINE Alu 11 294 -18 1905 173 3 0 chr5 179727378 179727684 -23357848 + AluSx SINE Alu 1 307 -5 197 306 82 0 chr5 179727699 179727784 -23357748 + L2 LINE L2 3155 3246 -26 258 56 0 0 chr5 179727797 179727833 -23357699 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1141 184 0 0 chr5 179728069 179728248 -23357284 + AluJb SINE Alu 1 179 -133 585 255 73 25 chr5 179728845 179729049 -23356483 + MIR SINE MIR 49 262 0 21 0 0 0 chr5 179729484 179729505 -23356027 + AT_rich Low_complexity Low_complexity 1 21 0 958 214 0 0 chr5 179729505 179729664 -23355868 - FAM SINE Alu -16 159 1 1025 179 270 3 chr5 179729828 179730124 -23355408 + THE1C LTR MaLR 1 375 0 2383 84 0 37 chr5 179730610 179730931 -23354601 + AluSc SINE Alu 1 309 0 1458 213 45 7 chr5 179731627 179731914 -23353618 - AluJo SINE Alu -14 298 1 1972 151 0 7 chr5 179731993 179732292 -23353240 - AluSx SINE Alu -3 309 13 207 363 0 29 chr5 179733120 179733222 -23352310 - MIR SINE MIR -54 208 110 489 300 27 13 chr5 179733715 179733865 -23351667 + MER115 DNA AcHobo 133 284 -409 1450 196 33 23 chr5 179733974 179734275 -23351257 - AluJb SINE Alu -8 304 1 808 242 133 17 chr5 179734275 179734622 -23350910 - L1MC4a LINE L1 -1071 6737 6351 23 33 0 0 chr5 179734744 179734774 -23350758 + AT_rich Low_complexity Low_complexity 1 30 0 1575 186 41 7 chr5 179734861 179735152 -23350380 + AluJb SINE Alu 1 301 -11 1564 260 92 55 chr5 179735154 179735317 -23350215 + L1M4 LINE L1 1404 1560 -5084 2447 80 0 0 chr5 179735317 179735617 -23349915 - AluY SINE Alu -11 300 1 1564 260 92 55 chr5 179735617 179736306 -23349226 + L1M4 LINE L1 1560 2222 -4422 2013 158 3 3 chr5 179736306 179736617 -23348915 + AluJb SINE Alu 1 311 -1 1564 260 92 55 chr5 179736617 179737266 -23348266 + L1M4 LINE L1 2222 3081 -3563 324 286 77 30 chr5 179737264 179737432 -23348100 - L1ME3 LINE L1 -10 6152 5980 * 494 231 77 0 chr5 179737744 179737890 -23347642 + FLAM_A SINE Alu 5 158 0 1741 146 3 67 chr5 179738177 179738307 -23347225 + AluJo SINE Alu 6 143 -169 2305 113 3 0 chr5 179738307 179738616 -23346916 + AluSx SINE Alu 1 310 -2 1741 146 3 67 chr5 179738616 179738813 -23346719 + AluJo SINE Alu 143 312 0 1128 190 9 9 chr5 179738884 179739100 -23346432 + AluJo SINE Alu 49 264 -48 860 177 185 8 chr5 179739115 179739375 -23346157 + L1MD3 LINE L1 7680 7985 -10 210 91 0 0 chr5 179739869 179739902 -23345630 + (GAA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr5 179740211 179740234 -23345298 + AT_rich Low_complexity Low_complexity 1 23 0 302 267 138 0 chr5 179741803 179741919 -23343613 + MIR SINE MIR 66 197 -65 276 255 115 17 chr5 179741978 179742145 -23343387 - MIR SINE MIR -50 212 33 451 213 219 62 chr5 179742573 179742733 -23342799 - MER5A DNA MER1_type -3 186 2 2114 104 14 44 chr5 179743437 179743764 -23341768 + THE1A LTR MaLR 1 317 -38 744 185 0 15 chr5 179743764 179743899 -23341633 - FLAM_C SINE Alu 0 133 1 2114 104 14 44 chr5 179743899 179743936 -23341596 + THE1A LTR MaLR 317 354 -1 12056 89 1 0 chr5 179743937 179745516 -23340016 + THE1A-int LTR MaLR 1 1580 0 2521 107 3 6 chr5 179745516 179745872 -23339660 + THE1A LTR MaLR 1 355 0 262 271 32 131 chr5 179745927 179746166 -23339366 + MIR SINE MIR 36 245 -17 1116 203 42 29 chr5 179746183 179746424 -23339108 - MIR SINE MIR -5 257 14 31 68 0 0 chr5 179747019 179747078 -23338454 + AT_rich Low_complexity Low_complexity 1 59 0 192 125 0 0 chr5 179748607 179748639 -23336893 + (T)n Simple_repeat Simple_repeat 1 32 0 306 203 195 8 chr5 179748673 179748791 -23336741 - L1ME4a LINE L1 -4 6117 5978 23 0 0 0 chr5 179748900 179748923 -23336609 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr5 179748982 179749022 -23336510 + AT_rich Low_complexity Low_complexity 1 40 0 1709 171 24 7 chr5 179749095 179749393 -23336139 + AluJo SINE Alu 1 303 -9 21 0 0 0 chr5 179749515 179749536 -23335996 + AT_rich Low_complexity Low_complexity 1 21 0 803 113 7 78 chr5 179750326 179750468 -23335064 - FLAM_C SINE Alu -1 132 1 23 0 0 0 chr5 179751240 179751263 -23334269 + AT_rich Low_complexity Low_complexity 1 23 0 623 288 85 9 chr5 179751291 179751503 -23334029 + MIR SINE MIR 20 247 -15 315 0 0 0 chr5 179751750 179751785 -23333747 + (CA)n Simple_repeat Simple_repeat 1 35 0 2445 62 7 7 chr5 179753319 179753627 -23331905 - AluY SINE Alu -3 308 1 242 291 51 38 chr5 179753955 179754034 -23331498 - L2 LINE L2 -22 3250 3171 1060 169 0 6 chr5 179754054 179754226 -23331306 + AluSg/x SINE Alu 134 304 -8 279 218 88 59 chr5 179754457 179754627 -23330905 + L1ME4a LINE L1 5713 5887 -234 33 0 0 0 chr5 179755858 179755891 -23329641 + AT_rich Low_complexity Low_complexity 1 33 0 2170 106 0 3 chr5 179756476 179756788 -23328744 - AluSg SINE Alu 0 311 1 371 305 68 51 chr5 179757008 179757185 -23328347 - MIR3 SINE MIR -2 206 27 1859 154 4 0 chr5 179758239 179758518 -23327014 - AluJb SINE Alu -32 280 1 322 221 87 29 chr5 179759930 179760102 -23325430 - L1MC5 LINE L1 -47 7914 7733 301 301 0 0 chr5 179760270 179760343 -23325189 - L1ME4a LINE L1 -82 6039 5967 349 232 92 7 chr5 179760562 179760704 -23324828 + L1ME4a LINE L1 5794 5947 -174 289 265 0 0 chr5 179761711 179761794 -23323738 - L1ME4a LINE L1 -76 6045 5963 220 294 50 50 chr5 179762046 179762165 -23323367 - MIR SINE MIR -76 186 68 937 172 167 18 chr5 179762475 179762702 -23322830 + MIR SINE MIR 2 262 0 22 0 0 0 chr5 179762983 179763005 -23322527 + AT_rich Low_complexity Low_complexity 1 22 0 432 0 0 0 chr5 179763113 179763161 -23322371 + (CA)n Simple_repeat Simple_repeat 1 48 0 25 65 0 0 chr5 179764241 179764287 -23321245 + AT_rich Low_complexity Low_complexity 1 46 0 2896 144 57 27 chr5 179765389 179765984 -23319548 - L1MA7 LINE L1 -4 6287 5675 213 278 0 0 chr5 179766689 179766743 -23318789 + MIR SINE MIR 88 141 -67 407 293 293 0 chr5 179767411 179767674 -23317858 - L2 LINE L2 -7 3306 2967 577 303 22 39 chr5 179767803 179767944 -23317588 - L2 LINE L2 -463 2851 2714 678 151 8 16 chr5 179767944 179768070 -23317462 - L1MB8 LINE L1 0 6178 6054 577 303 22 39 chr5 179768070 179768159 -23317373 - L2 LINE L2 -600 2714 2625 265 365 0 0 chr5 179768233 179768329 -23317203 - L2 LINE L2 -22 3250 3155 809 104 0 0 chr5 179769063 179769188 -23316344 - L1P LINE L1 -2700 3446 3322 * 9865 80 1 0 chr5 179769172 179770562 -23314970 - L1P LINE L1 -1344 4802 3411 1515 87 24 0 chr5 179770562 179770765 -23314767 + L1PA7 LINE L1 5941 6153 -1 3191 157 119 6 chr5 179770890 179771522 -23314010 - MER39 LTR ERV1 -4 703 1 294 291 0 0 chr5 179771599 179771685 -23313847 - L1ME4a LINE L1 -85 6036 5951 2190 95 3 10 chr5 179772301 179772595 -23312937 + AluY SINE Alu 1 292 -19 537 285 77 36 chr5 179773127 179773213 -23312319 + MIR SINE MIR 22 103 -159 1914 230 66 33 chr5 179773213 179773787 -23311745 - MLT1E LTR MaLR 0 593 1 537 285 77 36 chr5 179773787 179773921 -23311611 + MIR SINE MIR 103 251 -11 270 220 33 11 chr5 179774239 179774330 -23311202 - L1ME4a LINE L1 -2027 5781 5689 344 309 103 0 chr5 179774377 179774474 -23311058 - L2 LINE L2 -13 3259 3153 2191 124 22 40 chr5 179774956 179775031 -23310501 - THE1B LTR MaLR 0 364 289 2448 79 0 3 chr5 179775031 179775334 -23310198 + AluSp SINE Alu 1 302 -11 2191 124 22 40 chr5 179775334 179775629 -23309903 - THE1B LTR MaLR -75 289 1 11631 101 8 0 chr5 179775629 179777197 -23308335 - THE1B-int LTR MaLR 0 1580 1 2133 133 28 19 chr5 179777197 179777558 -23307974 - THE1B LTR MaLR 0 364 1 3724 160 27 22 chr5 179778155 179778868 -23306664 + LTR39 LTR ERV1 8 723 -60 22 35 0 0 chr5 179778868 179778897 -23306635 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 179779108 179779153 -23306379 + AT_rich Low_complexity Low_complexity 1 45 0 2578 174 57 21 chr5 179779184 179779749 -23305783 + MER34C LTR ERV1 1 585 0 1324 151 5 0 chr5 179779778 179779963 -23305569 + AluSx SINE Alu 1 186 -126 3181 129 26 45 chr5 179779963 179780536 -23304996 - LTR10A LTR ERV1 0 609 1 836 79 0 0 chr5 179780536 179780687 -23304845 + AluSp/q SINE Alu 183 333 0 2579 156 6 39 chr5 179780909 179781247 -23304285 + L1MB8 LINE L1 5683 6000 -178 2670 157 14 0 chr5 179781247 179781667 -23303865 - MSTB LTR MaLR 0 426 1 2579 156 6 39 chr5 179781667 179781841 -23303691 + L1MB8 LINE L1 6000 6178 0 1079 225 85 72 chr5 179781999 179782652 -23302880 - LTR48 LTR ERV1 0 644 1 1047 246 112 32 chr5 179783448 179783850 -23301682 - MER57B LTR ERV1 0 434 1 24 0 0 0 chr5 179784148 179784172 -23301360 + AT_rich Low_complexity Low_complexity 1 24 0 759 145 38 15 chr5 179784174 179784305 -23301227 + AluJo SINE Alu 1 134 -178 336 114 179 93 chr5 179784308 179784402 -23301130 - MER33 DNA MER1_type -2317 268 156 2141 104 0 7 chr5 179784402 179784710 -23300822 - AluSq SINE Alu 0 307 2 336 114 179 93 chr5 179784710 179784754 -23300778 - MER33 DNA MER1_type -2429 156 117 1004 207 56 0 chr5 179784756 179784969 -23300563 - AluJo SINE Alu -1 311 87 420 191 148 52 chr5 179784970 179785085 -23300447 - MER33 DNA MER1_type -198 126 1 712 130 7 68 chr5 179785126 179785272 -23300260 - LTR52 LTR ERVL -284 137 1 528 259 150 49 chr5 179785490 179785837 -23299695 + L2 LINE L2 2929 3310 -3 2996 226 32 15 chr5 179786360 179787143 -23298389 + L1MC4a LINE L1 7013 7808 0 321 277 76 0 chr5 179787185 179787304 -23298228 + MIR3 SINE MIR 14 141 -67 589 73 0 128 chr5 179787967 179788076 -23297456 + FRAM SINE Alu 39 133 -43 404 248 50 14 chr5 179788093 179788234 -23297298 - MIR SINE MIR -66 196 51 23 0 0 0 chr5 179788606 179788629 -23296903 + GC_rich Low_complexity Low_complexity 1 23 0 677 227 32 16 chr5 179789471 179789656 -23295876 - MIR SINE MIR -19 243 56 217 193 70 18 chr5 179789992 179790049 -23295483 + MIR SINE MIR 117 176 -86 902 102 7 0 chr5 179790404 179790541 -23294991 + L1MB3 LINE L1 6046 6183 0 373 261 108 73 chr5 179790563 179790664 -23294868 - MLT1L LTR MaLR -80 535 439 2271 127 0 6 chr5 179790664 179790978 -23294554 - AluSx SINE Alu 0 312 1 373 261 108 73 chr5 179790978 179791190 -23294342 - MLT1L LTR MaLR -176 439 211 243 300 14 0 chr5 179791161 179791231 -23294301 - MLT1J LTR MaLR -338 173 103 * 233 239 28 28 chr5 179791327 179791398 -23294134 - MIR SINE MIR -108 100 30 186 43 0 0 chr5 179792742 179792765 -23292767 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1394 151 0 5 chr5 179793116 179793328 -23292204 - AluJo SINE Alu -19 293 83 21 71 0 0 chr5 179793737 179793779 -23291753 + AT_rich Low_complexity Low_complexity 1 42 0 297 301 35 42 chr5 179794197 179794340 -23291192 + L2 LINE L2 2693 2834 -480 322 284 37 18 chr5 179794357 179794466 -23291066 + L2 LINE L2 3203 3313 0 669 245 66 10 chr5 179795106 179795302 -23290230 + MIR SINE MIR 40 246 -16 439 289 40 7 chr5 179795805 179795957 -23289575 + MIR SINE MIR 7 163 -99 188 297 17 25 chr5 179796114 179796232 -23289300 + MIR SINE MIR 135 251 -11 1883 163 58 3 chr5 179796232 179796557 -23288975 + MER7A DNA MER2_type 2 342 -4 273 257 57 0 chr5 179797324 179797394 -23288138 - L2 LINE L2 -5 3308 3235 344 241 46 19 chr5 179797534 179797642 -23287890 + L2 LINE L2 2969 3079 -234 424 259 66 41 chr5 179797983 179798180 -23287352 + MIR SINE MIR 48 249 -13 1775 173 3 25 chr5 179798904 179799222 -23286310 - AluJo SINE Alu -1 311 1 254 212 40 0 chr5 179799265 179799364 -23286168 + (TA)n Simple_repeat Simple_repeat 2 104 0 282 267 68 53 chr5 179799367 179799573 -23285959 - L1ME4a LINE L1 -156 5965 5757 278 299 51 43 chr5 179801270 179801387 -23284145 + L2 LINE L2 3149 3266 -6 653 234 90 70 chr5 179801636 179801892 -23283640 + MIR SINE MIR 2 262 0 219 36 0 0 chr5 179802013 179802041 -23283491 + (TTA)n Simple_repeat Simple_repeat 1 28 0 540 264 114 0 chr5 179802327 179802494 -23283038 + MER5A DNA MER1_type 2 187 -2 533 279 16 26 chr5 179802494 179802684 -23282848 + MIR SINE MIR 13 200 -62 221 327 41 50 chr5 179803293 179803513 -23282019 - L3b LINE CR1 -114 1469 1252 * 745 201 17 11 chr5 179803509 179803683 -23281849 + MIR SINE MIR 18 192 -70 369 306 123 27 chr5 179803963 179804182 -23281350 - MIR SINE MIR 0 262 23 180 294 0 0 chr5 179804704 179804772 -23280760 + GA-rich Low_complexity Low_complexity 2 69 0 327 281 0 22 chr5 179804965 179805054 -23280478 - MIR3 SINE MIR -24 184 98 847 214 33 0 chr5 179805439 179805621 -23279911 - MER5A DNA MER1_type -1 188 1 341 270 79 84 chr5 179806237 179806415 -23279117 + MIR SINE MIR 25 201 -61 291 265 189 15 chr5 179807214 179807346 -23278186 + MIR SINE MIR 72 226 -36 260 311 0 22 chr5 179807425 179807515 -23278017 + L2 LINE L2 3136 3223 -49 513 197 228 21 chr5 179810464 179810657 -23274875 + MIR SINE MIR 18 250 -12 280 262 50 71 chr5 179810979 179811120 -23274412 - MER5A DNA MER1_type -50 139 2 226 294 0 0 chr5 179811684 179811752 -23273780 - L1MC/D LINE L1 -1883 5925 5858 3436 159 38 5 chr5 179812091 179812693 -23272839 + LTR26E LTR ERV1 1 622 0 3760 136 42 42 chr5 179812900 179813457 -23272075 + MER50 LTR ERV1 1 560 -174 2252 93 23 10 chr5 179813457 179813759 -23271773 - AluSx SINE Alu -6 306 1 3760 136 42 42 chr5 179813759 179813861 -23271671 + MER50 LTR ERV1 559 660 -74 2305 205 113 78 chr5 179813861 179814646 -23270886 + LTR1B LTR ERV1 1 813 -13 323 156 0 0 chr5 179814717 179814762 -23270770 + LTR1B-int LTR ERV1 2 46 -7159 427 216 48 0 chr5 179814775 179814900 -23270632 + L1ME4a LINE L1 5990 6120 -1 2940 173 105 33 chr5 179815249 179815924 -23269608 + LTR8A LTR ERV1 2 725 -2 549 44 0 0 chr5 179816797 179816865 -23268667 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 2027 148 3 10 chr5 179816922 179817232 -23268300 + AluJb SINE Alu 2 309 -3 575 277 38 6 chr5 179817739 179817898 -23267634 + MIR SINE MIR 26 189 -73 26 0 0 0 chr5 179817937 179817963 -23267569 + AT_rich Low_complexity Low_complexity 1 26 0 2540 48 0 3 chr5 179818065 179818359 -23267173 - AluY SINE Alu -18 293 1 190 344 47 0 chr5 179818583 179818647 -23266885 - L2 LINE L2 -218 3054 2988 492 305 16 5 chr5 179818677 179818867 -23266665 - MIR SINE MIR -22 240 49 242 234 0 0 chr5 179819816 179819880 -23265652 - MIR SINE MIR -143 119 56 260 259 428 6 chr5 179820053 179820366 -23265166 - L2 LINE L2 -18 3295 2851 2727 207 30 9 chr5 179820574 179821145 -23264387 - MER119 DNA MER1_type 0 583 1 258 219 31 0 chr5 179821978 179822042 -23263490 + MIR SINE MIR 86 151 -111 2485 199 90 68 chr5 179822043 179822851 -23262681 - LTR1B LTR ERV1 0 826 1 452 263 103 0 chr5 179822913 179823069 -23262463 - MIR SINE MIR -33 229 58 260 304 54 49 chr5 179823207 179823391 -23262141 - L2 LINE L2 -204 3068 2884 647 234 87 60 chr5 179824200 179824365 -23261167 - MER113 DNA MER1_type? 0 521 345 2494 64 0 0 chr5 179824365 179824661 -23260871 - AluY SINE Alu -15 296 1 647 234 87 60 chr5 179824661 179824760 -23260772 - MER113 DNA MER1_type? -176 345 250 575 215 0 68 chr5 179824764 179824927 -23260605 - MER5B DNA MER1_type -1 177 26 442 197 88 15 chr5 179824931 179825068 -23260464 - MER113 DNA MER1_type? -288 233 87 1053 163 104 42 chr5 179825076 179825316 -23260216 + AluJo SINE Alu 50 304 -8 231 250 0 15 chr5 179825917 179825985 -23259547 + MIR3 SINE MIR 92 158 -50 23 33 0 0 chr5 179826213 179826243 -23259289 + AT_rich Low_complexity Low_complexity 1 30 0 264 277 124 15 chr5 179826310 179826447 -23259085 - MIR SINE MIR 0 262 111 946 148 57 5 chr5 179826492 179826701 -23258831 - Charlie5 DNA MER1_type 0 2624 2405 598 124 21 0 chr5 179826727 179826824 -23258708 - L1MB8 LINE L1 -6 6172 6074 31 26 0 0 chr5 179826910 179826948 -23258584 + AT_rich Low_complexity Low_complexity 1 38 0 1839 159 0 7 chr5 179826948 179827231 -23258301 - AluJo SINE Alu -23 289 9 291 271 8 45 chr5 179827232 179827365 -23258167 - L1MB8 LINE L1 -115 6063 5936 * 2809 201 36 8 chr5 179827360 179828006 -23257526 - L1M4 LINE L1 -1197 4949 4286 967 211 61 74 chr5 179828006 179828378 -23257154 + MLT2D LTR ERVL 1 276 -138 2335 37 0 0 chr5 179828378 179828649 -23256883 + L1P2 LINE L1 5421 5691 -463 2427 83 3 0 chr5 179829247 179829547 -23255985 - AluSp SINE Alu -12 301 1 242 298 53 26 chr5 179829663 179829777 -23255755 + L2 LINE L2 2430 2546 -768 1563 101 119 30 chr5 179829846 179830114 -23255418 + AluSq SINE Alu 1 292 -21 279 280 40 0 chr5 179830119 179830219 -23255313 + L2 LINE L2 2218 2321 -993 230 254 0 32 chr5 179830486 179830549 -23254983 + AluJ/FLAM SINE Alu 30 90 -212 393 102 0 0 chr5 179832171 179832230 -23253302 + (TA)n Simple_repeat Simple_repeat 1 59 0 3614 107 4 4 chr5 179832230 179832844 -23252688 - L1P5 LINE L1 -373 5778 5166 260 277 0 0 chr5 179832836 179832919 -23252613 + L1MC/D LINE L1 5698 5780 -2028 * 555 305 94 26 chr5 179832921 179833337 -23252195 + L2 LINE L2 2332 2775 -539 569 251 50 27 chr5 179833372 179833591 -23251941 - MER58A DNA MER1_type 0 224 1 2220 123 3 3 chr5 179833966 179834274 -23251258 + AluSc SINE Alu 1 308 -1 564 314 50 27 chr5 179835175 179835513 -23250019 + HAL1 LINE L1 2161 2506 -1 2239 125 0 0 chr5 179835935 179836232 -23249300 - AluSx SINE Alu -15 297 1 199 143 48 12 chr5 179836412 179836496 -23249036 + (TA)n Simple_repeat Simple_repeat 2 88 0 976 166 23 6 chr5 179836645 179836820 -23248712 + AluJb SINE Alu 119 296 -16 406 298 233 11 chr5 179836844 179837119 -23248413 + MER102b DNA MER1_type 2 337 -4 289 203 43 0 chr5 179838647 179838716 -23246816 + MER94 DNA DNA 1 72 -62 1918 153 58 11 chr5 179838716 179839063 -23246469 - MLT1A1 LTR MaLR -2 363 1 268 370 37 16 chr5 179839621 179839810 -23245722 - L2 LINE L2 -217 3055 2863 1854 213 61 2 chr5 179839896 179840323 -23245209 - L1ME2 LINE L1 -19 6145 5694 199 162 0 0 chr5 179840569 179840606 -23244926 + L2 LINE L2 3022 3058 -214 222 229 49 33 chr5 179840651 179840712 -23244820 - L2 LINE L2 -6 3266 3205 2282 49 0 0 chr5 179842177 179842461 -23243071 - L1P LINE L1 -2577 3569 3286 535 321 11 11 chr5 179842524 179842711 -23242821 + MIR SINE MIR 3 189 -73 388 274 139 82 chr5 179843177 179843256 -23242276 - MIR SINE MIR -1 261 188 2249 100 13 16 chr5 179843256 179843567 -23241965 - AluSx SINE Alu -2 310 1 388 274 139 82 chr5 179843567 179843732 -23241800 - MIR SINE MIR -74 188 3 4608 219 31 21 chr5 179844441 179845461 -23240071 - L1M4 LINE L1 -5498 1044 14 2202 222 76 16 chr5 179845461 179846169 -23239363 - L1ME2 LINE L1 -727 5439 4693 1324 191 60 12 chr5 179846171 179846490 -23239042 - L1ME LINE L1 -549 5615 5282 325 41 113 0 chr5 179846497 179846594 -23238938 + (TA)n Simple_repeat Simple_repeat 1 108 0 542 255 156 21 chr5 179846594 179846628 -23238904 - L1ME LINE L1 -904 5242 5214 2138 143 0 0 chr5 179846628 179846935 -23238597 - AluSg SINE Alu -3 307 1 542 255 156 21 chr5 179846935 179847233 -23238299 - L1ME LINE L1 -932 5214 4865 25 31 0 0 chr5 179847241 179847273 -23238259 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 179847312 179847333 -23238199 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 381 22 0 0 chr5 179847583 179847629 -23237903 + (CA)n Simple_repeat Simple_repeat 2 47 0 366 310 10 17 chr5 179847970 179848149 -23237383 - MIR SINE MIR -43 219 42 270 331 109 23 chr5 179848175 179848350 -23237182 + MER117 DNA MER1_type 1 190 -7 932 193 89 33 chr5 179848825 179849128 -23236404 - MER33 DNA MER1_type -12 312 1 1993 175 65 0 chr5 179849274 179849645 -23235887 - MSTD LTR MaLR 0 396 2 256 83 0 0 chr5 179849762 179849798 -23235734 - MSTD LTR MaLR -359 37 2 479 312 99 45 chr5 179850753 179850857 -23234675 + L2 LINE L2 2766 2863 -450 2366 99 0 6 chr5 179850857 179851169 -23234363 - AluSg SINE Alu 0 310 1 479 312 99 45 chr5 179851169 179851578 -23233954 + L2 LINE L2 2863 3313 0 332 270 108 99 chr5 179851925 179852277 -23233255 + L2 LINE L2 2918 3272 0 933 282 189 24 chr5 179852286 179852790 -23232742 - MLT1K LTR MaLR 0 588 2 1947 176 60 58 chr5 179852863 179853364 -23232168 + MLT1D LTR MaLR 1 502 -3 186 103 0 0 chr5 179853397 179853426 -23232106 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 789 224 62 16 chr5 179854182 179854374 -23231158 - L1ME3A LINE L1 -10 6160 5960 11007 26 2 0 chr5 179855347 179857389 -23228143 + L1PA3 LINE L1 4109 6152 -3 437 279 114 6 chr5 179857459 179857617 -23227915 - MER5B DNA MER1_type -3 175 1 521 327 20 44 chr5 179858565 179858813 -23226719 + MIR SINE MIR 18 259 -3 354 244 34 55 chr5 179858836 179859000 -23226532 + MIR SINE MIR 76 244 -18 257 160 0 117 chr5 179859627 179859721 -23225811 - L1ME4a LINE L1 -5 6116 6034 455 189 27 27 chr5 179859721 179859832 -23225700 + MER5B DNA MER1_type 57 167 -11 614 264 53 22 chr5 179859881 179860108 -23225424 - L1ME4a LINE L1 -188 5933 5700 570 167 217 0 chr5 179860162 179860300 -23225232 - MIR SINE MIR -32 230 63 455 268 0 18 chr5 179860310 179860422 -23225110 - L1ME4a LINE L1 -480 5641 5532 1051 140 0 0 chr5 179861529 179861700 -23223832 + L1MA3 LINE L1 5787 5957 -348 234 286 6 165 chr5 179862860 179863042 -23222490 + MIR SINE MIR 20 172 -90 712 280 101 76 chr5 179863372 179863925 -23221607 + MLT1K LTR MaLR 22 588 0 226 263 18 0 chr5 179864085 179864142 -23221390 + L2 LINE L2 3242 3299 -14 234 317 37 24 chr5 179865081 179865245 -23220287 + MIR3 SINE MIR 22 187 -21 473 365 17 13 chr5 179865446 179865676 -23219856 - MIR SINE MIR -26 236 6 323 164 16 0 chr5 179866095 179866156 -23219376 - L2 LINE L2 -6 3266 3205 21 0 0 0 chr5 179866215 179866236 -23219296 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr5 179867379 179867409 -23218123 + (CA)n Simple_repeat Simple_repeat 2 31 0 264 59 0 0 chr5 179868670 179868704 -23216828 + (CA)n Simple_repeat Simple_repeat 2 35 0 451 309 6 12 chr5 179869210 179869375 -23216157 + MIR SINE MIR 29 192 -70 248 308 188 8 chr5 179869667 179869800 -23215732 - MIR SINE MIR -32 230 74 1843 149 50 23 chr5 179870385 179870687 -23214845 - AluJo SINE Alu -2 310 1 226 289 0 53 chr5 179870917 179870993 -23214539 + C-rich Low_complexity Low_complexity 1 72 0 469 263 106 28 chr5 179871161 179871340 -23214192 + MIR SINE MIR 59 251 -11 514 268 32 78 chr5 179872224 179872430 -23213102 + MIR SINE MIR 28 225 -37 1324 256 111 34 chr5 179873653 179874068 -23211464 - MLT1G1 LTR MaLR 0 595 89 2219 114 27 67 chr5 179874068 179874473 -23211059 - MLT1B LTR MaLR -1 389 1 1324 256 111 34 chr5 179874473 179874570 -23210962 - MLT1G1 LTR MaLR -506 89 1 2445 84 0 0 chr5 179875208 179875505 -23210027 + AluSc SINE Alu 1 297 -12 981 279 90 44 chr5 179876309 179876670 -23208862 + L1MC/D LINE L1 5119 5462 -704 1319 213 110 3 chr5 179876670 179876980 -23208552 + MER2 DNA MER2_type 2 344 0 981 279 90 44 chr5 179876980 179877287 -23208245 + L1MC/D LINE L1 5462 5819 -347 7475 42 5 0 chr5 179877986 179878951 -23206581 - L1PA5 LINE L1 -1 6153 5192 686 233 68 34 chr5 179878990 179879166 -23206366 - MER5A DNA MER1_type -5 184 3 187 215 31 0 chr5 179879917 179879982 -23205550 + GA-rich Low_complexity Low_complexity 2 68 0 495 228 0 0 chr5 179880239 179880340 -23205192 - MER5A DNA MER1_type -80 109 9 511 264 45 22 chr5 179880348 179880526 -23205006 - MIR3 SINE MIR -11 197 16 499 154 18 109 chr5 179880764 179880818 -23204714 + MER8 DNA MER2_type 140 181 -58 2344 95 0 3 chr5 179880818 179881104 -23204428 + AluSx SINE Alu 1 287 -25 561 30 0 0 chr5 179881104 179881171 -23204361 + (CA)n Simple_repeat Simple_repeat 2 68 0 2344 95 0 3 chr5 179881171 179881189 -23204343 + AluSx SINE Alu 287 304 -8 499 154 18 109 chr5 179881189 179881244 -23204288 + MER8 DNA MER2_type 181 239 0 763 191 95 0 chr5 179881244 179881391 -23204141 - MER46A DNA MER2_type -75 161 1 189 107 0 0 chr5 179881705 179881733 -23203799 + (CTCA)n Simple_repeat Simple_repeat 3 30 0 510 337 99 48 chr5 179881735 179882171 -23203361 - L2 LINE L2 0 3272 2815 283 284 118 10 chr5 179882293 179882395 -23203137 - MIR SINE MIR -71 191 79 1126 289 50 2 chr5 179882410 179882828 -23202704 - MER20B DNA MER1_type 0 783 346 751 253 95 37 chr5 179883297 179883717 -23201815 - MLT1H1 LTR MaLR -10 545 3 477 319 11 92 chr5 179883721 179884003 -23201529 - L2 LINE L2 -32 3240 2982 248 245 0 0 chr5 179884009 179884058 -23201474 + L2 LINE L2 3265 3313 0 192 349 122 34 chr5 179884082 179884320 -23201212 - L2 LINE L2 -419 2895 2637 3549 210 34 99 chr5 179884988 179886284 -23199248 - L1MC5 LINE L1 -111 7850 6639 285 29 0 0 chr5 179886355 179886389 -23199143 + (TA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 179886513 179886534 -23198998 + AT_rich Low_complexity Low_complexity 1 21 0 621 221 105 17 chr5 179886979 179887160 -23198372 + MIR SINE MIR 49 245 -17 271 320 32 21 chr5 179887309 179887450 -23198082 - MIR SINE MIR 0 208 63 514 288 33 27 chr5 179887856 179888040 -23197492 - MIR SINE MIR -71 191 7 197 132 26 0 chr5 179888142 179888180 -23197352 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 689 261 106 5 chr5 179888197 179888385 -23197147 + MIR SINE MIR 18 224 -38 258 311 28 47 chr5 179888452 179888558 -23196974 + MIR SINE MIR 34 137 -71 1185 186 5 19 chr5 179888574 179888789 -23196743 - AluJo SINE Alu -10 302 91 842 172 191 38 chr5 179888792 179889001 -23196531 - AluJo SINE Alu -59 253 13 952 93 0 0 chr5 179889085 179889214 -23196318 - AluSg/x SINE Alu 0 310 182 2110 116 0 0 chr5 179889216 179889493 -23196039 - AluSx SINE Alu -35 277 1 502 301 16 47 chr5 179889592 179889785 -23195747 + MER5A DNA MER1_type 3 189 0 559 176 129 78 chr5 179889837 179889934 -23195598 - MER5A DNA MER1_type -4 185 94 1845 131 0 77 chr5 179889934 179890121 -23195411 - AluSx SINE Alu -2 310 110 360 0 0 0 chr5 179890121 179890161 -23195371 + (TC)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr5 179890160 179890193 -23195339 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 1845 131 0 77 chr5 179890161 179890341 -23195191 - AluSx SINE Alu -202 110 1 559 176 129 78 chr5 179890341 179890414 -23195118 - MER5A DNA MER1_type -95 94 5 409 296 35 35 chr5 179890428 179890597 -23194935 + MIR SINE MIR 70 238 -24 208 304 20 29 chr5 179890652 179890754 -23194778 + MER5A DNA MER1_type 89 189 0 578 308 87 63 chr5 179891238 179891712 -23193820 - L2 LINE L2 -8 3305 2821 448 209 20 139 chr5 179891714 179891915 -23193617 - MIR SINE MIR 0 262 86 247 264 143 0 chr5 179892486 179892577 -23192955 + MIR SINE MIR 78 181 -81 232 292 0 52 chr5 179892841 179892937 -23192595 + MIR SINE MIR 172 262 0 420 331 0 0 chr5 179892991 179893115 -23192417 + MER94 DNA DNA 4 127 -7 313 245 128 0 chr5 179893616 179893710 -23191822 - MIR SINE MIR -2 260 155 293 289 12 12 chr5 179894098 179894181 -23191351 - L2 LINE L2 -32 3240 3158 2283 104 7 0 chr5 179894426 179894724 -23190808 + AluSg SINE Alu 1 300 -10 219 333 60 8 chr5 179894798 179894915 -23190617 - L2 LINE L2 0 3313 3191 5798 206 14 15 chr5 179895049 179896376 -23189156 - L1 LINE L1 -1885 4977 3653 2196 127 14 8 chr5 179896380 179896721 -23188811 - MER51B LTR ERV1 0 377 50 490 109 152 11 chr5 179896722 179896814 -23188718 - MER51A LTR ERV1 -529 105 1 17526 134 40 29 chr5 179896817 179900425 -23185107 - L1PBa LINE L1 -3213 3649 2 719 275 111 9 chr5 179900453 179900777 -23184755 - MER113 DNA MER1_type? -120 401 45 847 142 0 30 chr5 179901320 179901454 -23184078 + FLAM_A SINE Alu 1 130 -3 192 118 39 20 chr5 179901735 179901786 -23183746 + GA-rich Low_complexity Low_complexity 1 52 0 429 186 175 0 chr5 179901970 179902067 -23183465 - L2 LINE L2 -5 3308 3195 421 235 77 71 chr5 179902069 179902265 -23183267 + MIR SINE MIR 6 202 -60 1053 202 29 37 chr5 179902268 179902291 -23183241 - L1M4 LINE L1 -717 5461 5439 1610 174 11 17 chr5 179902291 179902606 -23182926 - AluSq SINE Alu 0 313 1 1053 202 29 37 chr5 179902606 179903042 -23182490 - L1M4 LINE L1 -739 5439 4943 256 345 60 0 chr5 179903064 179903180 -23182352 - MIR SINE MIR -108 154 32 345 280 34 0 chr5 179903343 179903461 -23182071 + MIR SINE MIR 134 255 -7 2265 195 56 84 chr5 179903761 179904371 -23181161 + MLT1E LTR MaLR 1 593 0 655 240 43 132 chr5 179906543 179906799 -23178733 + MLT1L LTR MaLR 236 442 -173 1397 216 62 45 chr5 179906799 179907155 -23178377 - MLT1A1 LTR MaLR 0 365 4 655 240 43 132 chr5 179907155 179907315 -23178217 + MLT1L LTR MaLR 442 615 0 9346 93 9 20 chr5 179907639 179908270 -23177262 + HSMAR1 DNA Mariner 18 628 -659 2319 99 26 0 chr5 179908270 179908574 -23176958 - AluSx SINE Alu 0 312 1 9346 93 9 20 chr5 179908574 179909226 -23176306 + HSMAR1 DNA Mariner 628 1286 -1 514 150 0 0 chr5 179909557 179909637 -23175895 + AluJ/FRAM SINE Alu 232 311 -1 352 240 19 19 chr5 179909662 179909766 -23175766 + GA-rich Low_complexity Low_complexity 6 109 0 937 280 40 42 chr5 179911270 179912055 -23173477 + L1MCc LINE L1 1129 2127 -4970 2546 153 21 7 chr5 179912084 179912508 -23173024 - L1PA16 LINE L1 0 6166 5737 450 261 37 83 chr5 179912993 179913265 -23172267 - MLT1I LTR MaLR -124 285 58 200 309 0 15 chr5 179913457 179913525 -23172007 + L2 LINE L2 3247 3313 0 509 341 178 14 chr5 179913692 179913979 -23171553 - L2 LINE L2 0 3272 2939 210 319 14 102 chr5 179913973 179914268 -23171264 - L2 LINE L2 -828 2486 2218 * 2090 246 59 72 chr5 179914270 179915034 -23170498 + MER21B LTR ERV1 1 754 -109 782 285 71 15 chr5 179915280 179915690 -23169842 - HAL1 LINE L1 -1012 1495 1063 6214 224 47 27 chr5 179915701 179917155 -23168377 + L1MA9 LINE L1 2 1425 -4951 2580 137 3 0 chr5 179917155 179917519 -23168013 - MER47A DNA MER2_type -1 365 1 6214 224 47 27 chr5 179917519 179919198 -23166334 + L1MA9 LINE L1 1425 6094 -282 1198 137 81 0 chr5 179919210 179919421 -23166111 + L1MA9 LINE L1 6149 6376 0 1336 269 118 82 chr5 179919427 179919512 -23166020 - HAL1 LINE L1 -1466 1041 961 2106 71 0 0 chr5 179919512 179919767 -23165765 - AluY SINE Alu -22 289 35 1336 269 118 82 chr5 179919767 179920329 -23165203 - HAL1 LINE L1 -1546 961 343 2689 38 0 16 chr5 179920329 179920645 -23164887 - AluY SINE Alu 0 311 1 1336 269 118 82 chr5 179920645 179921000 -23164532 - HAL1 LINE L1 -2164 343 2 25 0 0 0 chr5 179921059 179921084 -23164448 + AT_rich Low_complexity Low_complexity 1 25 0 227 202 0 96 chr5 179922300 179922394 -23163138 - MER113 DNA MER1_type? -304 217 133 2185 214 31 5 chr5 179922413 179922828 -23162704 + MSTB LTR MaLR 1 426 0 9909 181 10 6 chr5 179922828 179924473 -23161059 + MSTB-int LTR MaLR 1 1651 0 2205 191 32 7 chr5 179924484 179924888 -23160644 + MSTB LTR MaLR 12 425 -1 1562 264 86 84 chr5 179924952 179925695 -23159837 - L2 LINE L2 -3 3310 2570 1507 220 31 62 chr5 179925695 179926081 -23159451 - MLT1A2 LTR MaLR 0 374 1 1562 264 86 84 chr5 179926081 179926452 -23159080 - L2 LINE L2 -743 2570 2201 2218 93 16 29 chr5 179926452 179926762 -23158770 - AluY SINE Alu -5 306 1 1562 264 86 84 chr5 179926762 179926857 -23158675 - L2 LINE L2 -1112 2201 2108 933 308 59 27 chr5 179926857 179927380 -23158152 + MER34 LTR ERV1 3 542 0 1562 264 86 84 chr5 179927380 179927553 -23157979 - L2 LINE L2 -1205 2108 1937 2377 85 0 3 chr5 179927553 179927846 -23157686 + AluY SINE Alu 1 292 -19 1562 264 86 84 chr5 179927846 179928122 -23157410 - L2 LINE L2 -1376 1937 1668 2546 104 22 25 chr5 179928122 179928487 -23157045 + THE1B LTR MaLR 1 364 0 1562 264 86 84 chr5 179928487 179928630 -23156902 - L2 LINE L2 -1645 1668 1527 2072 139 7 0 chr5 179929315 179929617 -23155915 - AluSx SINE Alu -8 304 1 3689 182 23 68 chr5 179929873 179930150 -23155382 - LTR39 LTR ERV1 0 783 495 4848 109 13 49 chr5 179930150 179930867 -23154665 - LTR8 LTR ERV1 0 691 1 3689 182 23 68 chr5 179930867 179931409 -23154123 - LTR39 LTR ERV1 -288 495 1 421 283 111 66 chr5 179931674 179932052 -23153480 + MLT1K LTR MaLR 181 575 -13 387 385 6 13 chr5 179932365 179932521 -23153011 + MIR3 SINE MIR 15 169 -39 2142 138 0 0 chr5 179932549 179932853 -23152679 + AluSx SINE Alu 1 304 -8 1983 170 28 0 chr5 179932872 179933225 -23152307 + MLT1A1 LTR MaLR 3 365 0 339 338 0 36 chr5 179935662 179935801 -23149731 + L2 LINE L2 70 203 -3111 2547 74 0 3 chr5 179936044 179936380 -23149152 + L1PA5 LINE L1 5814 6148 -6 845 194 5 79 chr5 179936411 179936627 -23148905 + MLT2B1 LTR ERVL 318 517 -3 3985 236 49 32 chr5 179936661 179938018 -23147514 - L1M4 LINE L1 -1902 4244 2865 382 225 12 0 chr5 179938018 179938098 -23147434 - MER33 DNA MER1_type -242 82 2 472 231 0 18 chr5 179938275 179938419 -23147113 - L1MA9 LINE L1 0 6291 6159 504 263 35 40 chr5 179938434 179938632 -23146900 - L1ME3A LINE L1 -14 6156 5960 988 246 5 104 chr5 179938632 179939018 -23146514 + MER69 DNA AcHobo 1 348 -878 654 296 9 60 chr5 179939020 179939159 -23146373 - L1ME3A LINE L1 -369 5793 5648 1757 189 0 3 chr5 179939159 179939450 -23146082 - AluJo SINE Alu -2 310 21 654 296 9 60 chr5 179939450 179939742 -23145790 - L1ME3A LINE L1 -514 5648 5384 1285 280 49 41 chr5 179939796 179940004 -23145528 - L1ME3A LINE L1 -852 5294 5089 1672 148 56 3 chr5 179940004 179940288 -23145244 + AluJo SINE Alu 13 311 -1 1285 280 49 41 chr5 179940288 179940622 -23144910 - L1ME3A LINE L1 -1057 5089 4742 2362 103 0 0 chr5 179940622 179940924 -23144608 - AluSx SINE Alu -10 302 1 1285 280 49 41 chr5 179940924 179941113 -23144419 - L1ME3A LINE L1 -1404 4742 4556 1614 272 31 41 chr5 179941399 179941962 -23143570 + L2 LINE L2 2744 3299 -14 349 339 8 16 chr5 179941980 179942101 -23143431 + MIR SINE MIR 34 153 -109 274 233 47 0 chr5 179942530 179942616 -23142916 - MLT1I LTR MaLR -2 407 318 840 308 24 8 chr5 179942963 179943213 -23142319 - MIR SINE MIR -8 254 1 329 294 10 10 chr5 179943948 179944050 -23141482 + MLT1K LTR MaLR 141 242 -346 258 167 42 0 chr5 179944363 179944411 -23141121 + MLT1K LTR MaLR 537 586 -2 210 200 40 0 chr5 179944449 179944499 -23141033 - MIR SINE MIR -112 150 99 2046 131 13 16 chr5 179945179 179945485 -23140047 + AluSx SINE Alu 1 305 -7 2305 98 27 41 chr5 179945563 179945851 -23139681 + L1PB2 LINE L1 5790 6073 -78 2459 67 10 0 chr5 179945851 179946149 -23139383 + AluY SINE Alu 1 301 -10 2305 98 27 41 chr5 179946149 179946227 -23139305 + L1PB2 LINE L1 6073 6151 0 1932 142 0 10 chr5 179946585 179946901 -23138631 - AluSx SINE Alu 0 313 1 240 293 0 0 chr5 179947050 179947108 -23138424 + MER113 DNA MER1_type? 464 521 0 199 230 230 35 chr5 179947204 179947291 -23138241 - MIR SINE MIR -108 154 51 500 214 0 0 chr5 179948026 179948129 -23137403 - L1MD1 LINE L1 -10 6232 6130 2120 161 70 5 chr5 179948187 179948602 -23136930 - L1MC1 LINE L1 -465 5868 5427 * 6430 176 23 34 chr5 179948594 179950257 -23135275 - L1PB4 LINE L1 0 6858 5238 2154 134 0 0 chr5 179950257 179950549 -23134983 + AluSx SINE Alu 1 292 -20 6430 176 23 34 chr5 179950549 179951264 -23134268 - L1PB4 LINE L1 -1620 5238 4517 552 190 0 26 chr5 179951266 179951382 -23134150 - AluJo SINE Alu -2 310 198 1664 182 93 28 chr5 179951403 179951832 -23133700 + LTR2B LTR ERV1 34 490 0 44197 67 10 5 chr5 179951832 179958604 -23126928 + Harlequin LTR ERV1 1 6896 0 1711 184 85 32 chr5 179958625 179959059 -23126473 + LTR2B LTR ERV1 34 490 0 1140 226 0 0 chr5 179959059 179959258 -23126274 - AluJo SINE Alu -111 201 3 6678 204 15 6 chr5 179959263 179960821 -23124711 - L1PB4 LINE L1 -2361 4487 2915 6834 184 49 9 chr5 179960850 179964948 -23120584 + L1PB2 LINE L1 3 3316 -3546 4062 171 48 73 chr5 179964956 179966050 -23119482 - MER11C LTR ERVK -5 1066 1 10256 176 20 36 chr5 179966050 179967905 -23117627 + L1PB2 LINE L1 3314 5198 -1669 207 0 0 0 chr5 179967905 179967928 -23117604 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 10256 176 20 36 chr5 179967928 179968327 -23117205 + L1PB2 LINE L1 5198 5602 -1265 1443 117 31 123 chr5 179968327 179968666 -23116866 + AluYb8 SINE Alu 1 310 0 10256 176 20 36 chr5 179968666 179968873 -23116659 + L1PB2 LINE L1 5602 5811 -1056 1525 131 22 9 chr5 179968873 179969102 -23116430 + AluSc SINE Alu 69 300 -9 10256 176 20 36 chr5 179969102 179970250 -23115282 + L1PB2 LINE L1 5811 6863 -4 6446 231 27 27 chr5 179970262 179970450 -23115082 - L1PB4 LINE L1 -3950 2899 2712 2162 134 0 10 chr5 179970450 179970756 -23114776 - AluSx SINE Alu -9 303 1 1825 168 55 0 chr5 179970758 179971049 -23114483 - AluJb SINE Alu -5 307 1 6446 231 27 27 chr5 179971049 179972690 -23112842 - L1PB4 LINE L1 -4137 2712 1067 1549 253 27 9 chr5 179973049 179973488 -23112044 - L1PB4 LINE L1 -6392 457 11 3643 199 54 29 chr5 179973502 179974609 -23110923 - L1MC/D LINE L1 -743 6198 5079 1564 266 105 74 chr5 179974615 179975211 -23110321 - L1MC/D LINE L1 -5015 1408 832 2275 149 10 25 chr5 179975211 179975607 -23109925 + MLT1B LTR MaLR 1 390 0 1564 266 105 74 chr5 179975607 179976183 -23109349 - L1MC/D LINE L1 -5591 832 200 2126 168 20 34 chr5 179976255 179976380 -23109152 + Tigger2a DNA MER2_type 1 126 -2582 2473 135 3 3 chr5 179976380 179976744 -23108788 - THE1B LTR MaLR 0 364 1 2126 168 20 34 chr5 179976744 179977058 -23108474 + Tigger2a DNA MER2_type 126 434 0 210 182 18 0 chr5 179977058 179977113 -23108419 + (TA)n Simple_repeat Simple_repeat 1 56 0 2368 96 0 0 chr5 179977434 179977736 -23107796 - AluSc SINE Alu -7 302 1 2647 125 39 10 chr5 179977968 179978384 -23107148 + MSTA LTR MaLR 1 428 0 366 315 64 35 chr5 179978647 179978850 -23106682 + MIR SINE MIR 8 216 -46 276 257 55 55 chr5 179978909 179979018 -23106514 + MIR SINE MIR 108 216 -46 354 206 196 93 chr5 179979072 179979106 -23106426 - MIR SINE MIR -2 260 231 2191 223 29 21 chr5 179979106 179979621 -23105911 - LTR53 LTR ERVL 0 519 1 354 206 196 93 chr5 179979621 179979676 -23105856 - MIR SINE MIR -31 231 183 1510 207 90 3 chr5 179979676 179980010 -23105522 + MLT1A1 LTR MaLR 1 363 -2 354 206 196 93 chr5 179980010 179980113 -23105419 - MIR SINE MIR -79 183 47 270 332 30 50 chr5 179980354 179980616 -23104916 - Charlie8 DNA MER1_type -2141 276 20 559 329 24 9 chr5 179980937 179981150 -23104382 + MIR SINE MIR 46 261 -1 1204 252 103 55 chr5 179981309 179981950 -23103582 - L2 LINE L2 -4 3309 2633 193 189 27 0 chr5 179982115 179982152 -23103380 - L2 LINE L2 -37 3235 3198 2292 80 3 26 chr5 179982652 179982965 -23102567 - AluSp SINE Alu -7 306 1 2463 89 0 0 chr5 179983517 179983821 -23101711 + AluSq SINE Alu 5 308 -5 526 286 82 27 chr5 179983975 179984195 -23101337 - MIR SINE MIR -14 248 17 21 0 0 0 chr5 179985786 179985807 -23099725 + AT_rich Low_complexity Low_complexity 1 21 0 1446 191 50 13 chr5 179986323 179986622 -23098910 - AluJb SINE Alu -2 310 1 1800 87 12 0 chr5 179986631 179986873 -23098659 - AluSc SINE Alu -11 298 54 232 246 70 0 chr5 179987485 179987542 -23097990 - MIR SINE MIR -111 151 91 562 293 75 38 chr5 179988158 179988424 -23097108 - MLT1J LTR MaLR -3 508 233 2038 122 0 3 chr5 179988454 179988757 -23096775 - AluSx SINE Alu -10 302 1 438 255 90 90 chr5 179989014 179989202 -23096330 + MIR SINE MIR 74 261 -1 607 288 37 5 chr5 179990526 179990717 -23094815 + MIR SINE MIR 2 198 -64 251 297 143 0 chr5 179990854 179990945 -23094587 + L2 LINE L2 3169 3272 0 464 254 30 22 chr5 179991356 179991490 -23094042 + MIR3 SINE MIR 29 163 -45 2150 115 3 0 chr5 179991562 179991857 -23093675 - AluSx SINE Alu -16 296 1 21 0 0 0 chr5 179991940 179991961 -23093571 + AT_rich Low_complexity Low_complexity 1 21 0 434 293 124 22 chr5 179991990 179992215 -23093317 + LTR33 LTR ERVL 26 273 -248 3896 125 52 16 chr5 179993056 179993686 -23091846 + MER39B LTR ERV1 1 653 0 277 269 62 35 chr5 179993747 179993995 -23091537 - L1MC4a LINE L1 -343 5819 5659 698 273 167 51 chr5 179994002 179994460 -23091072 - L2 LINE L2 -34 3279 2761 2640 116 55 57 chr5 179994656 179994817 -23090715 + L1MB2 LINE L1 5628 5788 -383 1739 156 28 0 chr5 179994817 179995105 -23090427 + AluJb SINE Alu 5 300 -12 2640 116 55 57 chr5 179995105 179995469 -23090063 + L1MB2 LINE L1 5788 6152 -19 830 109 133 0 chr5 179995474 179995602 -23089930 - AluJb SINE Alu -167 145 1 386 257 165 0 chr5 179995625 179995734 -23089798 + MIR SINE MIR 57 183 -79 254 200 0 0 chr5 179995845 179995885 -23089647 + L2 LINE L2 3264 3303 -10 293 220 0 0 chr5 179995952 179996002 -23089530 + L2 LINE L2 3264 3313 0 1729 226 173 23 chr5 179996168 179996689 -23088843 - MLT1E2 LTR MaLR -27 599 1 206 254 0 84 chr5 179997323 179997394 -23088138 + polypyrimidine Low_complexity Low_complexity 4 68 0 296 282 47 67 chr5 179998113 179998262 -23087270 - MIR3 SINE MIR -44 164 19 314 228 47 134 chr5 179998532 179998620 -23086912 + L1MC4a LINE L1 5344 5438 -2370 869 165 0 0 chr5 179998620 179998753 -23086779 + FLAM_A SINE Alu 1 133 0 314 228 47 134 chr5 179998753 179998940 -23086592 + L1MC4a LINE L1 5438 5595 -2213 879 176 23 11 chr5 179998944 179999120 -23086412 + AluJo SINE Alu 123 300 -12 1068 246 55 30 chr5 179999148 179999583 -23085949 + L1MC4a LINE L1 5622 6067 -1741 22 35 0 0 chr5 179999586 179999615 -23085917 + AT_rich Low_complexity Low_complexity 1 29 0 2027 67 4 0 chr5 179999721 179999990 -23085542 - AluY SINE Alu -5 306 37 410 296 42 32 chr5 180000056 180000232 -23085300 - MIR3 SINE MIR -8 200 27 200 222 0 0 chr5 180000538 180000583 -23084949 + A-rich Low_complexity Low_complexity 1 45 0 1808 161 14 8 chr5 180000951 180001296 -23084236 + MER61C LTR ERV1 7 434 0 1501 69 69 9 chr5 180001365 180001608 -23083924 - AluSx SINE Alu 0 310 55 266 49 49 0 chr5 180001937 180001978 -23083554 - MER58 DNA MER1_type -4 2416 2374 839 159 31 18 chr5 180001999 180002162 -23083370 - PABL_B LTR ERV1 0 667 503 3785 137 2 0 chr5 180002162 180002715 -23082817 - MER41A LTR ERV1 0 554 1 554 267 32 78 chr5 180002733 180003014 -23082518 - PABL_B LTR ERV1 -399 268 1 705 234 6 58 chr5 180003014 180003185 -23082347 - MER58A DNA MER1_type 0 162 1 2098 100 10 0 chr5 180003226 180003527 -23082005 + AluSx SINE Alu 1 304 -8 259 296 99 0 chr5 180003764 180003835 -23081697 - MIR3 SINE MIR -10 198 121 1825 173 96 8 chr5 180003886 180004250 -23081282 - MSTD LTR MaLR 0 396 1 6478 242 57 27 chr5 180004250 180005934 -23079598 - MSTD-int LTR MaLR 0 1735 2 1985 166 73 3 chr5 180005938 180006306 -23079226 - MSTD LTR MaLR -2 394 1 489 257 239 69 chr5 180006792 180007197 -23078335 - L2 LINE L2 -14 3299 2826 1380 216 4 4 chr5 180007344 180007617 -23077915 + AluJo SINE Alu 2 274 -38 225 0 0 0 chr5 180007617 180007642 -23077890 + (TA)n Simple_repeat Simple_repeat 1 25 0 667 268 57 82 chr5 180007642 180007996 -23077536 - L2 LINE L2 -689 2625 2281 269 340 21 0 chr5 180008271 180008368 -23077164 - L1MC/D LINE L1 -2216 5592 5494 663 230 153 43 chr5 180008532 180008759 -23076773 - MIR SINE MIR 0 262 16 192 226 0 81 chr5 180009100 180009162 -23076370 - MIR SINE MIR 0 262 206 264 209 45 15 chr5 180009235 180009302 -23076230 - L1ME4a LINE L1 -103 6018 5950 2096 251 37 29 chr5 180010763 180011353 -23074179 - MLT1G1 LTR MaLR 0 595 1 306 345 0 25 chr5 180013362 180013481 -23072051 - MIR SINE MIR -118 144 29 297 366 0 11 chr5 180013570 180013663 -23071869 + MIR SINE MIR 6 97 -165 1740 142 3 17 chr5 180013735 180014050 -23071482 - AluJb SINE Alu 0 311 1 460 285 210 10 chr5 180014138 180014338 -23071194 - MIR SINE MIR 0 262 23 2670 138 24 5 chr5 180014549 180014968 -23070564 - MSTA LTR MaLR 0 428 2 224 256 37 49 chr5 180015012 180015094 -23070438 - MIR3 SINE MIR -8 200 120 1970 224 57 47 chr5 180015218 180015271 -23070261 - L1ME3 LINE L1 -8 6154 6103 1757 168 0 0 chr5 180015271 180015557 -23069975 + AluJb SINE Alu 1 286 -26 1970 224 57 47 chr5 180015557 180016062 -23069470 - L1ME3 LINE L1 -59 6103 5590 282 255 88 29 chr5 180016179 180016281 -23069251 - MIR3 SINE MIR -46 162 55 273 321 124 6 chr5 180016346 180016572 -23068960 + MIR3 SINE MIR 1 262 0 656 191 27 73 chr5 180016715 180016908 -23068624 + MLT1G1 LTR MaLR 1 140 -415 1868 136 0 7 chr5 180017474 180017761 -23067771 + AluJo SINE Alu 1 285 -27 302 252 44 124 chr5 180017789 180018015 -23067517 - MIR SINE MIR -25 237 30 1766 197 22 100 chr5 180019320 180019822 -23065710 + MLT1C LTR MaLR 1 463 -4 181 256 0 0 chr5 180019845 180019884 -23065648 - MIR SINE MIR -177 85 47 4045 107 37 5 chr5 180019959 180020579 -23064953 - L1MA3 LINE L1 -3 6302 5663 1032 223 91 3 chr5 180020632 180020928 -23064604 + MER33 DNA MER1_type 3 324 0 387 262 32 56 chr5 180020930 180021056 -23064476 + L2 LINE L2 3191 3313 0 534 306 24 12 chr5 180021285 180021455 -23064077 - MIR SINE MIR -12 250 79 2379 122 38 8 chr5 180021800 180022168 -23063364 + MSTA LTR MaLR 50 428 0 828 249 106 5 chr5 180022817 180023034 -23062498 - MIR SINE MIR -22 240 2 545 279 19 12 chr5 180023059 180023220 -23062312 - MIR SINE MIR -64 198 37 363 285 199 5 chr5 180023832 180024018 -23061514 - MIR SINE MIR 0 262 41 1858 256 122 19 chr5 180024047 180024778 -23060754 - L2 LINE L2 -623 2691 1886 529 264 97 6 chr5 180024861 180025046 -23060486 + MIR SINE MIR 19 219 -43 1856 143 3 19 chr5 180025070 180025378 -23060154 - AluJo SINE Alu -9 303 1 30 0 0 0 chr5 180025378 180025408 -23060124 + AT_rich Low_complexity Low_complexity 1 30 0 490 307 32 99 chr5 180025720 180026124 -23059408 + L2 LINE L2 2896 3272 0 250 264 56 14 chr5 180026386 180026458 -23059074 + MIR SINE MIR 50 124 -84 251 286 111 16 chr5 180027547 180027673 -23057859 - L2 LINE L2 -136 3177 3040 229 229 98 0 chr5 180028224 180028285 -23057247 + L2 LINE L2 2750 2816 -498 277 91 0 23 chr5 180028300 180028344 -23057188 - MER45 DNA AcHobo -2 1579 1537 626 243 30 24 chr5 180028564 180028733 -23056799 + MER5B DNA MER1_type 5 174 -4 188 304 18 18 chr5 180028857 180028913 -23056619 + MER5A DNA MER1_type 130 185 -4 473 237 9 9 chr5 180028924 180029060 -23056472 - MIR SINE MIR -56 152 17 2242 99 0 0 chr5 180029060 180029364 -23056168 - AluSg SINE Alu -5 305 2 807 123 0 80 chr5 180029444 180029582 -23055950 + FLAM_C SINE Alu 6 132 -11 231 321 0 0 chr5 180030510 180030566 -23054966 + MIR SINE MIR 77 132 -76 1011 231 22 13 chr5 180030857 180031082 -23054450 - MIR SINE MIR -2 260 34 235 286 97 36 chr5 180031170 180031366 -23054166 - L2 LINE L2 -167 3105 2898 616 164 36 43 chr5 180031390 180031530 -23054002 - MIR SINE MIR -90 172 34 190 320 0 13 chr5 180031860 180031938 -23053594 - MIR SINE MIR -138 124 48 414 345 0 14 chr5 180032638 180032777 -23052755 - L2 LINE L2 -2 3270 3134 1351 154 13 17 chr5 180033210 180033444 -23052088 + L1MA6 LINE L1 6058 6290 -10 405 284 140 37 chr5 180033887 180034158 -23051374 - L2 LINE L2 -3 3269 2971 2289 157 8 3 chr5 180034243 180034619 -23050913 - MLT1B LTR MaLR -10 380 3 232 398 81 0 chr5 180034632 180034818 -23050714 - L2 LINE L2 -496 2818 2618 283 292 166 23 chr5 180034845 180035146 -23050386 - L2 LINE L2 -782 2532 2189 243 333 0 0 chr5 180035683 180035770 -23049762 - MIR SINE MIR 0 262 176 361 273 120 32 chr5 180035781 180035963 -23049569 + MLT1G1 LTR MaLR 55 274 -281 710 211 43 12 chr5 180036049 180036210 -23049322 + MLT1G1 LTR MaLR 427 592 -3 556 211 8 0 chr5 180036299 180036422 -23049110 + MIR SINE MIR 66 189 -73 260 300 0 0 chr5 180036447 180036507 -23049025 - MIR SINE MIR -180 82 23 579 274 23 29 chr5 180036694 180036869 -23048663 - L3 LINE CR1 -580 997 824 291 347 82 36 chr5 180037233 180037429 -23048103 - L3 LINE CR1 -935 642 438 229 208 75 58 chr5 180038407 180038527 -23047005 - MER91B DNA MER1_type -14 176 55 1201 279 82 23 chr5 180039023 180039497 -23046035 - LTR33 LTR ERVL -15 506 5 222 273 15 15 chr5 180039603 180039669 -23045863 + L2 LINE L2 3193 3258 -55 586 286 172 5 chr5 180040320 180040523 -23045009 + MIR SINE MIR 15 251 -11 224 213 0 0 chr5 180041053 180041100 -23044432 + (CA)n Simple_repeat Simple_repeat 2 48 0 416 252 60 40 chr5 180041598 180041749 -23043783 - MLT1J LTR MaLR -7 504 351 200 333 0 0 chr5 180042065 180042134 -23043398 + MIR SINE MIR 168 236 -26 1402 96 87 0 chr5 180042701 180042919 -23042613 - L1MA4A LINE L1 -4 6299 6063 1294 98 16 10 chr5 180042919 180043107 -23042425 + L1PB2 LINE L1 5882 6070 -81 2163 106 7 3 chr5 180043220 180043541 -23041991 + AluSx SINE Alu 1 322 0 228 67 0 0 chr5 180043567 180043597 -23041935 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 197 271 0 71 chr5 180044033 180044103 -23041429 - L2 LINE L2 -8 3264 3200 194 0 39 0 chr5 180045715 180045741 -23039791 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1142 168 16 0 chr5 180045742 180045932 -23039600 + L1MC1 LINE L1 5941 6133 -200 1398 181 9 4 chr5 180045933 180046165 -23039367 + Tigger7 DNA MER2_type 3 235 -470 542 135 10 31 chr5 180046162 180046258 -23039274 + Tigger7 DNA MER2_type 2386 2479 -8 * 1077 149 35 15 chr5 180046260 180046461 -23039071 + L1MC1 LINE L1 6127 6331 -2 2027 117 7 20 chr5 180046938 180047236 -23038296 + AluSx SINE Alu 1 294 -18 333 283 30 0 chr5 180047297 180047396 -23038136 - MIR SINE MIR -77 185 84 1906 154 7 3 chr5 180048074 180048372 -23037160 - AluJb SINE Alu -13 299 1 260 319 0 0 chr5 180048435 180048507 -23037025 + MIR3 SINE MIR 115 186 -22 495 307 87 0 chr5 180048673 180048823 -23036709 - MIR SINE MIR -88 174 12 262 259 65 37 chr5 180048826 180048934 -23036598 + MIR SINE MIR 126 236 -26 210 295 13 0 chr5 180048948 180049026 -23036506 + L3b LINE CR1 1195 1273 -310 528 233 35 0 chr5 180049257 180049373 -23036159 - MER91C DNA MER1_type -1 139 20 226 320 0 0 chr5 180049707 180049785 -23035747 - MER117 DNA MER1_type -106 91 14 306 264 35 11 chr5 180049791 180049878 -23035654 + MIR SINE MIR 4 92 -170 247 203 27 0 chr5 180049882 180049956 -23035576 - MLT1L LTR MaLR -4 611 536 1216 203 19 114 chr5 180050089 180050294 -23035238 + HsTC2 DNA Tc2 1289 1512 -386 257 67 0 22 chr5 180050294 180050339 -23035193 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1949 135 3 3 chr5 180050342 180050624 -23034908 - AluSx SINE Alu -30 282 1 1216 203 19 114 chr5 180050624 180050896 -23034636 + HsTC2 DNA Tc2 1514 1900 2 1288 231 243 33 chr5 180051072 180051583 -23033949 - MER51A LTR ERV1 -16 618 1 725 280 156 23 chr5 180051583 180051929 -23033603 - MLT1L LTR MaLR -223 392 1 302 168 80 106 chr5 180051933 180052046 -23033486 + MIR SINE MIR 95 204 -58 757 192 0 0 chr5 180052047 180052167 -23033365 + FLAM_C SINE Alu 1 120 -13 487 103 0 118 chr5 180052186 180052390 -23033142 + (TA)n Simple_repeat Simple_repeat 1 180 0 268 228 0 0 chr5 180052391 180052448 -23033084 + MIR SINE MIR 196 252 -10 196 283 0 0 chr5 180053200 180053253 -23032279 - L2 LINE L2 -5 3308 3256 450 312 69 5 chr5 180053325 180053514 -23032018 - MIR SINE MIR 0 262 62 2778 217 63 10 chr5 180053528 180054114 -23031418 + MER82 DNA MER2_type 1 617 -36 1571 224 90 82 chr5 180054185 180054773 -23030759 + MLT1E LTR MaLR 1 593 0 391 236 47 24 chr5 180054827 180054954 -23030578 - MIR SINE MIR -55 207 78 1424 228 49 39 chr5 180055273 180055659 -23029873 - MLT1B LTR MaLR 0 390 1 287 280 104 0 chr5 180055953 180056078 -23029454 - L2 LINE L2 -627 2687 2550 423 349 51 59 chr5 180056357 180056723 -23028809 + L2 LINE L2 1880 2240 -1074 1923 107 33 0 chr5 180056723 180056994 -23028538 - AluSx SINE Alu -16 296 17 423 349 51 59 chr5 180056994 180057254 -23028278 + L2 LINE L2 2240 2501 -813 315 330 45 0 chr5 180057291 180057403 -23028129 + MER94 DNA DNA 18 134 0 597 294 113 8 chr5 180057629 180057877 -23027655 + MLT1L LTR MaLR 36 309 -306 451 214 135 73 chr5 180057892 180058084 -23027448 + MLT1L LTR MaLR 288 596 -19 192 77 0 0 chr5 180059019 180059045 -23026487 + (TC)n Simple_repeat Simple_repeat 1 26 0 415 273 13 40 chr5 180059211 180059361 -23026171 - L2 LINE L2 0 3313 3168 522 198 0 0 chr5 180059688 180059779 -23025753 + MER58A DNA MER1_type 1 91 -16 2889 166 64 2 chr5 180060775 180061258 -23024274 - MLT2B1 LTR ERVL -7 513 1 216 111 0 0 chr5 180061270 180061306 -23024226 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 2346 148 3 0 chr5 180061307 180061673 -23023859 - L1PA13 LINE L1 -4 6159 5793 408 284 96 84 chr5 180061805 180062066 -23023466 - MLT1K LTR MaLR -162 426 163 410 320 13 13 chr5 180062933 180063089 -23022443 + MER117 DNA MER1_type 40 195 -2 212 338 12 0 chr5 180064661 180064741 -23020791 - L2 LINE L2 -4 3309 3229 2214 93 0 0 chr5 180064755 180065067 -23020465 + AluSg SINE Alu 1 312 0 209 239 134 0 chr5 180065151 180065218 -23020314 - L2 LINE L2 -191 3081 3006 267 266 32 0 chr5 180065473 180065567 -23019965 - L1ME LINE L1 -266 5855 5759 498 238 8 8 chr5 180065567 180065693 -23019839 - LTR67 LTR ERVL 0 557 432 232 284 11 74 chr5 180065797 180065892 -23019640 - LTR67 LTR ERVL -363 194 106 653 259 26 56 chr5 180065995 180066265 -23019267 - L1ME LINE L1 -349 5772 5511 1624 133 41 81 chr5 180066916 180067261 -23018271 + L1MC2 LINE L1 6005 6335 -9 385 261 176 24 chr5 180067303 180067468 -23018064 + MIR3 SINE MIR 18 207 -1 284 194 14 42 chr5 180068403 180068475 -23017057 - MER117 DNA MER1_type 0 197 128 308 263 117 24 chr5 180069170 180069383 -23016149 + L2 LINE L2 2952 3184 -129 410 272 29 0 chr5 180069480 180069583 -23015949 + L2 LINE L2 3195 3300 -13 1231 269 36 13 chr5 180070623 180071223 -23014309 - MER115 DNA AcHobo -12 681 2 1612 202 66 14 chr5 180071241 180071588 -23013944 + MLT1A1 LTR MaLR 1 365 0 225 0 0 0 chr5 180071972 180071997 -23013535 + (TA)n Simple_repeat Simple_repeat 2 26 0 373 344 77 0 chr5 180072107 180072290 -23013242 + MER117 DNA MER1_type 1 197 0 553 267 21 27 chr5 180072542 180072729 -23012803 + MIR SINE MIR 33 218 -44 180 0 0 0 chr5 180072863 180072883 -23012649 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 345 289 40 7 chr5 180072888 180073037 -23012495 + MER103 DNA DNA 2 155 -11 542 240 0 23 chr5 180073149 180073278 -23012254 - L2 LINE L2 0 3313 3188 279 271 0 12 chr5 180074206 180074291 -23011241 - MLT1K LTR MaLR -17 571 488 391 304 74 51 chr5 180074846 180075103 -23010429 + L1MEd LINE L1 122 384 -5735 210 71 0 0 chr5 180075163 180075191 -23010341 + (A)n Simple_repeat Simple_repeat 1 28 0 260 256 81 35 chr5 180075570 180075656 -23009876 + MER81 DNA DNA 20 109 -5 470 309 0 0 chr5 180075669 180075795 -23009737 - LTR33 LTR ERVL -46 475 350 545 170 0 0 chr5 180075796 180075890 -23009642 + L1PBa LINE L1 1 94 -6769 316 254 0 0 chr5 180075890 180075949 -23009583 - LTR33 LTR ERVL -158 363 305 767 283 28 24 chr5 180075981 180076193 -23009339 - LTR33 LTR ERVL -304 217 5 509 253 117 12 chr5 180076352 180076514 -23009018 - MLT1K LTR MaLR -372 216 38 222 128 0 0 chr5 180076532 180076571 -23008961 + (GA)n Simple_repeat Simple_repeat 1 39 0 929 268 31 11 chr5 180076665 180076952 -23008580 - MARNA DNA Mariner -57 529 237 348 264 47 23 chr5 180077358 180077487 -23008045 + MIR SINE MIR 59 190 -72 2649 169 11 32 chr5 180077514 180077982 -23007550 + MLT2C2 LTR ERVL 7 464 0 263 260 10 48 chr5 180078428 180078532 -23007000 + G-rich Low_complexity Low_complexity 4 103 0 655 302 60 4 chr5 180079153 180079385 -23006147 - MIR SINE MIR -12 250 6 347 297 10 0 chr5 180079416 180079517 -23006015 + MER117 DNA MER1_type 41 142 -55 2287 126 0 0 chr5 180080402 180080711 -23004821 + AluSg SINE Alu 1 309 -1 1221 309 106 38 chr5 180080810 180081019 -23004513 - L2 LINE L2 -1 3271 3078 1022 202 31 27 chr5 180081019 180081242 -23004290 + MER58A DNA MER1_type 1 224 0 1221 309 106 38 chr5 180081242 180082100 -23003432 - L2 LINE L2 -194 3078 2136 252 254 50 77 chr5 180082471 180082652 -23002880 + MER5A DNA MER1_type 10 185 -4 225 289 24 24 chr5 180083457 180083540 -23001992 + L2 LINE L2 2985 3067 -205 2566 117 33 63 chr5 180084162 180084388 -23001144 - MSTC LTR MaLR -12 416 185 378 0 0 0 chr5 180084388 180084430 -23001102 + (CA)n Simple_repeat Simple_repeat 2 43 0 1681 168 14 7 chr5 180084433 180084734 -23000798 - AluJb SINE Alu 0 305 3 2566 117 33 63 chr5 180084734 180084931 -23000601 - MSTC LTR MaLR -245 183 1 369 298 69 48 chr5 180086232 180086420 -22999112 + L2 LINE L2 3081 3272 0 17883 45 3 3 chr5 180086581 180088782 -22996750 - L1P LINE L1 -1985 4161 1961 8306 148 18 22 chr5 180088756 180089660 -22995872 + L1MA1 LINE L1 2343 3249 -4316 * 1967 127 34 0 chr5 180089660 180089951 -22995581 + AluSg SINE Alu 2 302 -8 8306 148 18 22 chr5 180089951 180091040 -22994492 + L1MA1 LINE L1 3249 4332 -3233 1977 165 0 3 chr5 180091040 180091349 -22994183 + AluJo SINE Alu 5 312 0 8306 148 18 22 chr5 180091349 180091468 -22994064 + L1MA1 LINE L1 4332 4450 -3115 789 205 0 0 chr5 180091459 180091625 -22993907 + L1MA1 LINE L1 4724 4889 -2676 * 1442 152 3 68 chr5 180091640 180091936 -22993596 - L1 LINE L1 -1166 4980 4704 * 6887 136 20 9 chr5 180091935 180093684 -22991848 + L1MA1 LINE L1 5899 7675 -46 6694 141 28 3 chr5 180093684 180094008 -22991524 + L1PB1 LINE L1 4070 4384 -1767 189 0 0 0 chr5 180094008 180094029 -22991503 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 6694 141 28 3 chr5 180094029 180095379 -22990153 + L1PB1 LINE L1 4384 5810 -341 321 26 0 0 chr5 180095379 180095417 -22990115 + (TA)n Simple_repeat Simple_repeat 1 38 0 6694 141 28 3 chr5 180095417 180095762 -22989770 + L1PB1 LINE L1 5810 6145 -6 387 69 17 0 chr5 180095776 180095834 -22989698 + L1MA1 LINE L1 6244 6302 0 437 234 122 54 chr5 180096958 180097163 -22988369 - MIR SINE MIR -42 220 2 789 208 45 6 chr5 180097690 180097868 -22987664 + L1MB5 LINE L1 5990 6174 0 392 296 19 49 chr5 180098917 180099079 -22986453 - MIR SINE MIR -46 216 60 308 335 84 11 chr5 180100023 180100202 -22985330 + MER117 DNA MER1_type 3 194 -3 211 257 71 43 chr5 180101194 180101264 -22984268 + MIR3 SINE MIR 86 157 -51 877 249 56 24 chr5 180101265 180101478 -22984054 - MER58A DNA MER1_type 0 224 5 1117 193 43 43 chr5 180101536 180101836 -22983696 - MER33 DNA MER1_type -23 301 2 1780 118 20 109 chr5 180101850 180102197 -22983335 - AluYb8 SINE Alu -2 316 1 184 302 0 0 chr5 180103781 180103824 -22981708 - L2 LINE L2 -13 3259 3217 279 302 22 25 chr5 180103849 180103992 -22981540 - MIR SINE MIR -63 145 1 3163 213 43 63 chr5 180105213 180106052 -22979480 - MER21B LTR ERV1 -6 925 1 458 301 105 9 chr5 180106110 180106339 -22979193 - MIR SINE MIR -10 252 2 532 258 63 44 chr5 180106475 180106894 -22978638 - MLT1H LTR MaLR -10 545 75 295 298 78 0 chr5 180107952 180108093 -22977439 - MER103 DNA DNA -1 165 14 228 182 108 35 chr5 180108408 180108494 -22977038 + MIR SINE MIR 73 166 -62 2082 113 17 17 chr5 180108695 180108997 -22976535 + AluSx SINE Alu 1 302 -10 260 281 34 55 chr5 180109329 180109475 -22976057 - MLT1I LTR MaLR -266 143 1 27 0 0 0 chr5 180110136 180110163 -22975369 + AT_rich Low_complexity Low_complexity 1 27 0 853 177 44 6 chr5 180110207 180110388 -22975144 + MER53 DNA DNA 2 189 0 198 250 0 0 chr5 180110914 180110970 -22974562 + A-rich Low_complexity Low_complexity 1 56 0 351 0 0 0 chr5 180111091 180111130 -22974402 + (CA)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr5 180111148 180111169 -22974363 + (CA)n Simple_repeat Simple_repeat 2 22 0 192 40 0 0 chr5 180111259 180111284 -22974248 + (CA)n Simple_repeat Simple_repeat 2 26 0 201 158 0 0 chr5 180111353 180111391 -22974141 + A-rich Low_complexity Low_complexity 1 38 0 1122 55 0 0 chr5 180112161 180112288 -22973244 - L1PA10 LINE L1 -14 6154 6028 29 28 0 0 chr5 180112291 180112327 -22973205 + AT_rich Low_complexity Low_complexity 1 36 0 367 322 8 50 chr5 180112507 180112639 -22972893 - MIR SINE MIR -56 152 24 424 299 81 82 chr5 180113846 180114293 -22971239 + L2 LINE L2 2776 3218 -54 405 274 40 0 chr5 180114417 180114541 -22970991 + MIR SINE MIR 39 167 -95 2265 116 3 7 chr5 180114542 180114852 -22970680 + AluSx SINE Alu 1 309 -3 22 35 0 0 chr5 180114877 180114906 -22970626 + AT_rich Low_complexity Low_complexity 1 29 0 355 362 105 24 chr5 180115381 180115801 -22969731 + L2 LINE L2 2858 3311 -2 568 279 57 82 chr5 180116688 180116932 -22968600 - MER102a DNA MER1_type -1 329 92 6539 106 6 12 chr5 180117373 180118480 -22967052 + L1PA16 LINE L1 4422 5547 -619 2981 128 18 9 chr5 180118480 180118924 -22966608 + MER83 LTR ERV1 1 448 0 6539 106 6 12 chr5 180118924 180119536 -22965996 + L1PA16 LINE L1 5547 6161 -5 24 0 0 0 chr5 180119564 180119588 -22965944 + AT_rich Low_complexity Low_complexity 1 24 0 304 351 64 16 chr5 180119589 180119840 -22965692 + L2 LINE L2 2015 2277 -1037 301 375 92 4 chr5 180119840 180120091 -22965441 + L2 LINE L2 2589 2861 -453 23 0 0 0 chr5 180120211 180120234 -22965298 + AT_rich Low_complexity Low_complexity 1 23 0 599 267 0 0 chr5 180120687 180120818 -22964714 - MIR SINE MIR -47 215 85 189 292 0 0 chr5 180121662 180121710 -22963822 + MIR3 SINE MIR 122 169 -39 2386 61 7 7 chr5 180122057 180122351 -22963181 + AluY SINE Alu 1 294 -17 272 261 37 52 chr5 180122879 180123013 -22962519 + MIR SINE MIR 100 231 -31 209 208 0 0 chr5 180123108 180123156 -22962376 + (ATG)n Simple_repeat Simple_repeat 2 49 0 301 318 17 29 chr5 180123156 180123329 -22962203 + MIR SINE MIR 82 252 -10 378 194 0 0 chr5 180124428 180124495 -22961037 + MLT1C LTR MaLR 35 101 -366 1779 171 15 94 chr5 180124528 180124931 -22960601 + MLT1B LTR MaLR 18 388 -2 1829 186 36 19 chr5 180124933 180125298 -22960234 + MLT1C LTR MaLR 97 467 0 2539 228 79 9 chr5 180126061 180126718 -22958814 - L1ME3A LINE L1 -10 6160 5458 642 304 95 5 chr5 180127625 180127923 -22957609 + L2 LINE L2 2723 3046 -226 2132 125 10 0 chr5 180128000 180128303 -22957229 - AluSx SINE Alu -6 306 1 408 125 0 0 chr5 180128365 180128429 -22957103 + (TG)n Simple_repeat Simple_repeat 2 65 0 206 324 15 0 chr5 180128441 180128509 -22957023 + L2 LINE L2 3245 3313 0 2157 280 75 57 chr5 180128712 180128874 -22956658 + L1M4b LINE L1 8 166 -6693 2076 122 6 13 chr5 180128874 180129186 -22956346 + AluY SINE Alu 1 310 -1 2157 280 75 57 chr5 180129186 180129813 -22955719 + L1M4b LINE L1 166 811 -6048 2793 243 45 53 chr5 180129819 180132482 -22953050 + L1M4b LINE L1 1876 4583 -2374 973 285 94 75 chr5 180133000 180133382 -22952150 - MLT1L LTR MaLR 0 615 215 2410 175 28 19 chr5 180133382 180133811 -22951721 - Tigger2a DNA MER2_type -1 433 1 973 285 94 75 chr5 180133811 180134031 -22951501 - MLT1L LTR MaLR -400 215 1 503 365 0 34 chr5 180134264 180134429 -22951103 - MIR SINE MIR -18 244 88 9556 169 83 24 chr5 180134429 180136085 -22949447 + MER52A LTR ERV1 1 1755 0 503 365 0 34 chr5 180136085 180136157 -22949375 - MIR SINE MIR -174 88 15 844 181 5 108 chr5 180136637 180136841 -22948691 + MER20 DNA MER1_type 36 218 -1 542 127 13 0 chr5 180137328 180137407 -22948125 + MADE1 DNA Mariner 1 80 0 583 226 19 38 chr5 180139987 180140146 -22945386 - MER5A DNA MER1_type -3 186 31 465 232 71 52 chr5 180140323 180140478 -22945054 + MIR SINE MIR 54 211 -51 1384 122 15 0 chr5 180141718 180141915 -22943617 - AluSc SINE Alu -10 299 100 2638 40 0 0 chr5 180142251 180142554 -22942978 + AluY SINE Alu 1 303 -8 954 175 165 10 chr5 180142583 180142777 -22942755 + MER58A DNA MER1_type 1 224 0 254 339 80 21 chr5 180143122 180143361 -22942171 + L2 LINE L2 1722 1974 -1340 1738 149 48 0 chr5 180143424 180143739 -22941793 - L1MA7 LINE L1 0 6291 5962 2073 169 3 0 chr5 180143752 180144118 -22941414 + L1MA7 LINE L1 5254 5620 -671 1121 150 6 6 chr5 180144118 180144298 -22941234 + AluSx SINE Alu 1 180 -132 597 66 0 13 chr5 180144308 180144384 -22941148 + AluSg1 SINE Alu 55 129 -180 2369 92 3 0 chr5 180144388 180144692 -22940840 + AluSg SINE Alu 1 305 -5 1747 197 18 3 chr5 180144694 180145029 -22940503 + L1MA7 LINE L1 5608 5947 -344 943 324 143 14 chr5 180145177 180145908 -22939624 + L2 LINE L2 2215 3054 -218 185 313 11 125 chr5 180145995 180146171 -22939361 + L2 LINE L2 3116 3271 -1 2484 140 48 22 chr5 180146180 180146593 -22938939 + MSTC LTR MaLR 1 424 -4 499 286 84 38 chr5 180146882 180147144 -22938388 - L1MC4 LINE L1 -70 7972 7699 812 279 105 39 chr5 180147269 180147677 -22937855 + MLT1J2 LTR MaLR 4 438 -12 210 250 167 62 chr5 180148737 180148833 -22936699 - MIR SINE MIR -1 261 156 360 309 55 73 chr5 180149349 180149624 -22935908 - L2 LINE L2 -95 3177 2908 644 275 33 24 chr5 180149964 180150175 -22935357 + MIR SINE MIR 49 261 -1 230 264 47 90 chr5 180150827 180151039 -22934493 - L2 LINE L2 -883 2431 2229 1271 81 0 17 chr5 180151081 180151254 -22934278 + AluY SINE Alu 45 214 -97 241 341 153 35 chr5 180152233 180152520 -22933012 + MLT1K LTR MaLR 73 393 -195 201 138 0 0 chr5 180152528 180152557 -22932975 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 770 201 32 133 chr5 180152564 180152842 -22932690 - MIR SINE MIR -11 251 2 386 296 62 6 chr5 180152863 180153025 -22932507 + MLT1K LTR MaLR 396 566 -22 255 204 187 99 chr5 180153105 180153389 -22932143 - L1ME4a LINE L1 -12 6109 5801 222 229 21 0 chr5 180153390 180153438 -22932094 + (TG)n Simple_repeat Simple_repeat 2 50 0 464 306 13 57 chr5 180154477 180154706 -22930826 - MIR SINE MIR -2 260 42 215 403 54 0 chr5 180154972 180155101 -22930431 - L2 LINE L2 -254 3018 2883 639 274 78 33 chr5 180155254 180155499 -22930033 + L2 LINE L2 3058 3313 0 740 244 85 0 chr5 180155735 180155911 -22929621 - MER117 DNA MER1_type -3 194 4 593 307 51 39 chr5 180156061 180156248 -22929284 + MIR SINE MIR 6 198 -64 1848 168 0 20 chr5 180156248 180156551 -22928981 + AluJb SINE Alu 1 297 -15 593 307 51 39 chr5 180156551 180156617 -22928915 + MIR SINE MIR 198 262 0 285 291 8 51 chr5 180157017 180157134 -22928398 + MIR SINE MIR 95 206 -56 2568 177 19 12 chr5 180157743 180158162 -22927370 + MSTB LTR MaLR 1 422 -4 8892 173 33 25 chr5 180158166 180159789 -22925743 + MSTB-int LTR MaLR 1 1637 -14 2540 164 18 48 chr5 180159802 180160241 -22925291 + MSTB LTR MaLR 1 426 0 920 277 95 26 chr5 180160266 180160645 -22924887 - MLT1I LTR MaLR 0 409 5 228 35 0 0 chr5 180161295 180161324 -22924208 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 378 0 0 0 chr5 180161323 180161365 -22924167 + (TG)n Simple_repeat Simple_repeat 1 42 0 536 259 103 73 chr5 180161451 180161703 -22923829 + MIR SINE MIR 14 261 -1 200 328 0 16 chr5 180161751 180161815 -22923717 - L3 LINE CR1 -521 1056 994 976 337 63 33 chr5 180161861 180162413 -22923119 - MLT1K LTR MaLR -18 570 2 305 291 27 9 chr5 180162477 180162587 -22922945 - MER117 DNA MER1_type -10 187 76 3630 204 34 26 chr5 180162746 180163528 -22922004 + L1M1 LINE L1 130 1279 -6286 890 144 31 6 chr5 180163630 180163790 -22921742 + MER83 LTR ERV1 282 445 -3 4413 125 2 2 chr5 180163790 180164405 -22921127 + L1PA16 LINE L1 5547 6161 -5 304 351 64 16 chr5 180164454 180164705 -22920827 + L2 LINE L2 2015 2277 -1037 301 375 92 4 chr5 180164705 180164956 -22920576 + L2 LINE L2 2589 2861 -453 23 0 0 0 chr5 180165076 180165099 -22920433 + AT_rich Low_complexity Low_complexity 1 23 0 599 267 0 0 chr5 180165552 180165683 -22919849 - MIR SINE MIR -47 215 85 189 292 0 0 chr5 180166525 180166573 -22918959 + MIR3 SINE MIR 122 169 -39 2820 10 22 0 chr5 180166920 180167231 -22918301 + AluYb8 SINE Alu 1 318 0 515 298 19 0 chr5 180168052 180168210 -22917322 + MIR SINE MIR 100 260 -2 235 35 0 0 chr5 180168261 180168290 -22917242 - MADE1 DNA Mariner -30 50 22 329 269 26 0 chr5 180168316 180168394 -22917138 - MADE1 DNA Mariner 0 80 1 234 364 61 0 chr5 180168986 180169118 -22916414 + MIR SINE MIR 123 262 0 1352 301 73 31 chr5 180169750 180170295 -22915237 - MLT1K LTR MaLR -3 585 18 294 280 53 0 chr5 180171119 180171194 -22914338 + L2 LINE L2 3155 3233 -39 558 304 0 6 chr5 180171233 180171394 -22914138 - MER117 DNA MER1_type -37 160 1 293 366 49 0 chr5 180172696 180172838 -22912694 + MIR SINE MIR 13 161 -101 8069 214 54 64 chr5 180172919 180173245 -22912287 + L1ME1 LINE L1 2700 3028 -3138 5519 93 18 7 chr5 180173245 180173976 -22911556 + L1PA14 LINE L1 5423 6161 0 8069 214 54 64 chr5 180173976 180174707 -22910825 + L1ME1 LINE L1 3028 3765 -2401 4102 124 50 8 chr5 180174707 180175321 -22910211 - LTR9B LTR ERV1 0 644 5 8069 214 54 64 chr5 180175321 180175437 -22910095 + L1ME1 LINE L1 3765 3881 -2285 369 43 0 0 chr5 180175437 180175484 -22910048 + (CA)n Simple_repeat Simple_repeat 2 48 0 8069 214 54 64 chr5 180175484 180175700 -22909832 + L1ME1 LINE L1 3881 4098 -2068 2380 85 0 3 chr5 180175700 180176005 -22909527 - AluY SINE Alu -7 304 1 8069 214 54 64 chr5 180176005 180177569 -22907963 + L1ME1 LINE L1 4098 5631 -535 1966 138 0 28 chr5 180177569 180177860 -22907672 + AluSx SINE Alu 1 283 -29 8069 214 54 64 chr5 180177860 180178385 -22907147 + L1ME1 LINE L1 5631 6160 -6 354 294 163 12 chr5 180178520 180178593 -22906939 + MER117 DNA MER1_type 10 71 -126 1539 190 118 84 chr5 180178593 180179078 -22906454 + MLT1D LTR MaLR 5 505 0 354 294 163 12 chr5 180179078 180179164 -22906368 + MER117 DNA MER1_type 71 193 -4 253 309 52 66 chr5 180179214 180179350 -22906182 - MIR SINE MIR -12 250 117 494 301 133 0 chr5 180180125 180180351 -22905181 - MIR SINE MIR 0 262 7 230 304 0 0 chr5 180180348 180180404 -22905128 + MIR SINE MIR 202 257 -5 * 391 290 48 11 chr5 180180492 180180678 -22904854 - L1ME3A LINE L1 -15 6155 5963 286 123 35 0 chr5 180180817 180180874 -22904658 + CT-rich Low_complexity Low_complexity 1 59 0 195 42 0 0 chr5 180180874 180180898 -22904634 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 2010 126 3 0 chr5 180180898 180181184 -22904348 - AluSx SINE Alu -25 287 1 202 284 60 0 chr5 180182023 180182090 -22903442 + MIR3 SINE MIR 135 205 -3 731 271 74 39 chr5 180183194 180183478 -22902054 - MLT1K LTR MaLR -17 571 278 25 31 0 0 chr5 180184257 180184289 -22901243 + AT_rich Low_complexity Low_complexity 1 32 0 547 251 61 54 chr5 180184409 180184754 -22900778 + MLT1H LTR MaLR 138 605 -19 642 283 44 22 chr5 180184966 180185192 -22900340 - MIR SINE MIR -8 254 24 1984 149 6 167 chr5 180186073 180186488 -22899044 + MER47B DNA MER2_type 1 324 -1999 4943 89 2 0 chr5 180186488 180187118 -22898414 - L1PB1 LINE L1 -4 6147 5517 1984 149 6 167 chr5 180187118 180187200 -22898332 + MER47B DNA MER2_type 324 418 0 670 274 125 29 chr5 180187231 180187743 -22897789 - L2 LINE L2 -98 3215 2648 2097 134 0 0 chr5 180187981 180188279 -22897253 - AluSx SINE Alu -14 298 1 279 229 64 37 chr5 180188497 180188606 -22896926 + MLT1J LTR MaLR 400 511 0 184 300 0 0 chr5 180189136 180189186 -22896346 - L3 LINE CR1 -2 1575 1526 215 379 24 8 chr5 180189291 180189415 -22896117 - MIR SINE MIR -26 236 111 614 274 31 104 chr5 180189517 180189834 -22895698 + MLT1I LTR MaLR 98 391 -18 217 335 105 24 chr5 180190213 180190461 -22895071 + L2 LINE L2 1507 1774 -1540 215 342 72 67 chr5 180190601 180191048 -22894484 + L2 LINE L2 2043 2491 -823 1131 206 28 0 chr5 180191764 180192016 -22893516 + L1MA9 LINE L1 6016 6274 -38 445 333 27 11 chr5 180192224 180192410 -22893122 + MER117 DNA MER1_type 4 192 -5 22 0 0 0 chr5 180192578 180192600 -22892932 + AT_rich Low_complexity Low_complexity 1 22 0 784 271 57 67 chr5 180193150 180193556 -22891976 + MLT1K LTR MaLR 181 582 -6 321 118 0 0 chr5 180194093 180194144 -22891388 + (ATG)n Simple_repeat Simple_repeat 3 53 0 2287 95 7 7 chr5 180194317 180194613 -22890919 + AluSg SINE Alu 1 296 -14 251 230 40 14 chr5 180195329 180195403 -22890129 + L2 LINE L2 3233 3308 -5 2119 127 3 10 chr5 180195618 180195926 -22889606 + AluSx SINE Alu 1 306 -6 910 275 162 3 chr5 180196247 180196705 -22888827 - L2 LINE L2 -9 3304 2786 310 277 61 1 chr5 180196751 180196858 -22888674 - MIR SINE MIR -68 140 36 362 293 178 48 chr5 180196968 180197299 -22888233 + L2 LINE L2 2897 3270 -2 220 329 0 13 chr5 180197729 180197805 -22887727 - MIR SINE MIR -115 147 73 180 194 0 0 chr5 180198598 180198634 -22886898 + MIR SINE MIR 118 153 -109 1497 123 45 0 chr5 180198665 180198885 -22886647 + MER30 DNA MER1_type 1 230 0 228 163 0 0 chr5 180198918 180198961 -22886571 + (CAT)n Simple_repeat Simple_repeat 1 43 0 335 318 178 34 chr5 180199869 180200421 -22885111 + L2 LINE L2 1687 2158 -1156 2439 174 74 6 chr5 180200421 180200892 -22884640 - MLT1D LTR MaLR 0 505 3 335 318 178 34 chr5 180200892 180201233 -22884299 + L2 LINE L2 2158 2709 -605 2550 229 53 65 chr5 180201305 180202108 -22883424 + MER21B LTR ERV1 1 794 -69 413 308 69 57 chr5 180202181 180202428 -22883104 + L2 LINE L2 2804 3053 -219 380 247 31 99 chr5 180202435 180202533 -22882999 + MLT1H LTR MaLR 12 96 -453 2228 123 0 0 chr5 180202533 180202834 -22882698 + AluSx SINE Alu 5 305 -7 380 247 31 99 chr5 180202834 180202897 -22882635 + MLT1H LTR MaLR 96 162 -387 241 260 41 0 chr5 180203129 180203202 -22882330 + LTR67 LTR ERVL 476 551 -6 2364 103 0 0 chr5 180203274 180203574 -22881958 + AluSx SINE Alu 1 300 -12 38 22 0 0 chr5 180203666 180203711 -22881821 + AT_rich Low_complexity Low_complexity 1 45 0 7793 22 0 0 chr5 180203876 180205106 -22880426 + L1PA3 LINE L1 4900 6129 -26 275 85 21 0 chr5 180205108 180205155 -22880377 + (TAA)n Simple_repeat Simple_repeat 3 50 0 589 285 48 10 chr5 180205405 180205612 -22879920 + MIR SINE MIR 48 262 0 330 87 0 0 chr5 180205836 180205882 -22879650 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 213 226 0 0 chr5 180206010 180206063 -22879469 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 348 272 26 0 chr5 180206793 180206907 -22878625 - MIR SINE MIR -67 195 79 639 355 71 17 chr5 180207186 180207595 -22877937 - L2 LINE L2 -1 3271 2841 399 295 89 64 chr5 180208077 180208470 -22877062 - L2 LINE L2 0 3313 2911 2263 108 3 0 chr5 180208641 180208947 -22876585 + AluSx SINE Alu 1 307 -5 306 198 99 41 chr5 180208962 180209083 -22876449 - MIR SINE MIR -115 147 20 344 226 88 50 chr5 180209252 180209332 -22876200 + L1ME4a LINE L1 5955 6031 -90 2380 97 0 0 chr5 180209332 180209632 -22875900 - AluSp SINE Alu -13 300 1 344 226 88 50 chr5 180209632 180209710 -22875822 + L1ME4a LINE L1 6031 6119 -2 252 189 84 84 chr5 180209749 180209844 -22875688 + L2 LINE L2 3199 3293 -20 218 304 116 9 chr5 180211191 180211303 -22874229 - L2 LINE L2 -2 3270 3147 401 223 62 9 chr5 180211313 180211425 -22874107 + L2 LINE L2 3155 3272 0 274 343 60 0 chr5 180211483 180211617 -22873915 - L3b LINE CR1 -230 1353 1212 2180 127 0 0 chr5 180211917 180212216 -22873316 + AluSx SINE Alu 5 303 -9 3525 135 46 17 chr5 180213661 180214264 -22871268 - L1MC1 LINE L1 -39 6294 5676 242 271 29 14 chr5 180214390 180214460 -22871072 - MER5A DNA MER1_type -30 159 89 1253 243 47 42 chr5 180214989 180215393 -22870139 - MLT1I LTR MaLR -3 406 1 345 237 34 34 chr5 180215631 180215746 -22869786 + MIR SINE MIR 102 216 -46 525 240 169 13 chr5 180215746 180215900 -22869632 - MER5A DNA MER1_type 0 189 12 324 290 69 8 chr5 180216083 180216214 -22869318 + MIR SINE MIR 15 153 -109 1125 281 16 9 chr5 180216215 180216532 -22869000 + MER46C DNA MER2_type 1 319 -19 240 294 0 0 chr5 180216591 180216659 -22868873 + MIR SINE MIR 195 262 0 234 286 50 25 chr5 180217017 180217136 -22868396 + MIR SINE MIR 24 145 -63 3484 212 24 8 chr5 180217976 180218680 -22866852 + LTR39 LTR ERV1 69 783 0 244 250 56 37 chr5 180219455 180219563 -22865969 + MIR SINE MIR 46 155 -107 294 308 9 20 chr5 180221544 180221663 -22863869 - MIR SINE MIR -62 146 37 378 224 126 21 chr5 180222642 180222785 -22862747 + MIR SINE MIR 90 247 -15 340 226 75 58 chr5 180223277 180223468 -22862064 + MIR SINE MIR 11 213 -49 2216 164 5 22 chr5 180223509 180223924 -22861608 - L1PB1 LINE L1 0 6151 5744 21 36 0 0 chr5 180224076 180224104 -22861428 + AT_rich Low_complexity Low_complexity 1 28 0 313 336 95 7 chr5 180225118 180225255 -22860277 + MIR SINE MIR 53 201 -61 407 305 16 0 chr5 180225473 180225601 -22859931 + MIR SINE MIR 40 169 -93 260 245 2 16 chr5 180226478 180226550 -22858982 + MIR SINE MIR 71 142 -66 227 240 167 21 chr5 180226687 180226783 -22858749 - MIR SINE MIR -79 129 20 280 304 59 37 chr5 180226976 180227111 -22858421 - MIR SINE MIR -7 255 118 2321 163 47 18 chr5 180227118 180227566 -22857966 + MLT1C LTR MaLR 7 467 0 912 313 65 52 chr5 180227593 180228334 -22857198 + L2 LINE L2 2431 3161 -152 3632 162 33 42 chr5 180228334 180228401 -22857131 - LTR62 LTR ERVK -2 717 651 207 0 0 0 chr5 180228401 180228424 -22857108 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2030 135 7 0 chr5 180228428 180228716 -22856816 - AluSx SINE Alu -22 290 1 3632 162 33 42 chr5 180228716 180229366 -22856166 - LTR62 LTR ERVK -71 648 1 912 313 65 52 chr5 180229366 180229487 -22856045 + L2 LINE L2 3161 3309 -4 186 239 35 71 chr5 180230508 180230621 -22854911 - MIR3 SINE MIR -1 207 99 271 280 170 0 chr5 180232340 180232440 -22853092 - L2 LINE L2 0 3272 3156 192 356 49 37 chr5 180233193 180233356 -22852176 - MIR3 SINE MIR -4 204 40 1013 232 104 40 chr5 180233617 180233944 -22851588 - MLT1K LTR MaLR -23 565 218 352 214 34 34 chr5 180234403 180234492 -22851040 - MLT1K LTR MaLR -365 223 135 309 247 12 12 chr5 180234586 180234671 -22850861 - MLT1K LTR MaLR -491 97 13 252 276 69 0 chr5 180234903 180234990 -22850542 - L2 LINE L2 -11 3261 3169 200 135 27 0 chr5 180235019 180235056 -22850476 - MIR SINE MIR 0 262 225 2150 124 3 0 chr5 180235924 180236223 -22849309 - AluSg SINE Alu -10 300 1 324 284 18 0 chr5 180236392 180236501 -22849031 + MIR SINE MIR 100 210 -52 191 373 0 0 chr5 180236671 180236738 -22848794 + L2 LINE L2 3203 3269 -3 591 327 9 9 chr5 180237216 180237430 -22848102 - MIR SINE MIR -1 261 48 197 309 21 10 chr5 180237710 180237807 -22847725 - MIR SINE MIR -119 143 46 1272 176 16 61 chr5 180238404 180238717 -22846815 + L1 LINE L1 4110 4408 -1738 * 1993 185 41 53 chr5 180238710 180239101 -22846431 + L1 LINE L1 4735 5120 -1026 459 37 0 0 chr5 180239101 180239155 -22846377 + L1PA5 LINE L1 6099 6152 -2 1993 185 41 53 chr5 180239155 180239254 -22846278 + L1 LINE L1 5120 5219 -927 22 0 0 0 chr5 180239348 180239370 -22846162 + AT_rich Low_complexity Low_complexity 1 22 0 1964 274 85 30 chr5 180239624 180240177 -22845355 + L1ME3A LINE L1 1 611 -5459 3832 67 4 19 chr5 180240177 180240657 -22844875 + L1PA7 LINE L1 5681 6153 -1 1964 274 85 30 chr5 180240657 180240895 -22844637 + L1ME3A LINE L1 611 835 -5235 37 23 0 0 chr5 180240895 180240939 -22844593 + AT_rich Low_complexity Low_complexity 1 44 0 1746 275 64 61 chr5 180241006 180241233 -22844299 + L1ME3A LINE L1 903 1128 -5133 2406 79 3 19 chr5 180241233 180241548 -22843984 + AluY SINE Alu 2 311 0 1746 275 64 61 chr5 180241548 180242551 -22842981 + L1ME3A LINE L1 1128 2137 -4124 640 204 15 0 chr5 180242542 180242674 -22842858 + L1MC3 LINE L1 7652 7785 0 * 1071 221 54 66 chr5 180242677 180243103 -22842429 + L1ME3A LINE L1 2089 2509 -3571 1044 296 54 9 chr5 180243177 180243508 -22842024 - MLT1J LTR MaLR -157 354 9 2163 80 13 7 chr5 180243509 180243810 -22841722 + L1PA5 LINE L1 5728 6030 -124 4048 191 25 99 chr5 180243939 180244686 -22840846 + L1M1 LINE L1 860 1504 -6061 270 0 0 0 chr5 180244686 180244716 -22840816 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 4048 191 25 99 chr5 180244716 180245043 -22840489 + L1M1 LINE L1 1504 1854 -5711 2940 108 36 10 chr5 180245044 180245461 -22840071 - MSTA LTR MaLR 0 428 1 3606 163 31 3 chr5 180245461 180246067 -22839465 - MSTA-int LTR MaLR 0 1651 1029 2161 144 47 8 chr5 180246068 180246429 -22839103 + THE1C LTR MaLR 1 375 0 2720 108 110 101 chr5 180246429 180246991 -22838541 + THE1C-int LTR MaLR 1 567 -1013 279 303 8 0 chr5 180247142 180247274 -22838258 + L1ME3A LINE L1 4145 4277 -1803 549 283 59 6 chr5 180247284 180247547 -22837985 + L1ME3A LINE L1 5580 5859 -241 21 0 0 0 chr5 180247593 180247614 -22837918 + AT_rich Low_complexity Low_complexity 1 21 0 2707 156 56 4 chr5 180247878 180248339 -22837193 - MER31A LTR ERV1 0 485 1 1001 316 59 19 chr5 180248805 180249226 -22836306 + MLT1K LTR MaLR 2 439 -149 336 294 164 12 chr5 180249362 180249534 -22835998 + MIR SINE MIR 66 262 0 359 311 74 22 chr5 180250221 180250356 -22835176 + MER117 DNA MER1_type 9 150 -47 213 255 0 0 chr5 180250744 180250791 -22834741 - MIR SINE MIR -62 146 100 370 338 68 0 chr5 180251239 180251372 -22834160 - L2 LINE L2 -27 3245 3104 216 368 23 11 chr5 180251535 180251622 -22833910 - L2 LINE L2 0 3272 3185 453 325 86 5 chr5 180252042 180252239 -22833293 + MIR SINE MIR 36 248 -14 26 64 0 0 chr5 180252353 180252400 -22833132 + AT_rich Low_complexity Low_complexity 1 47 0 287 247 130 39 chr5 180252468 180252622 -22832910 - L1MC4 LINE L1 -74 7968 7801 3378 247 65 6 chr5 180252873 180253645 -22831887 + L1M4 LINE L1 2687 3531 -2615 351 0 0 0 chr5 180253645 180253684 -22831848 + (CA)n Simple_repeat Simple_repeat 2 40 0 3378 247 65 6 chr5 180253684 180253892 -22831640 + L1M4 LINE L1 3531 3725 -2421 3312 172 2 7 chr5 180253884 180254471 -22831061 - L1P LINE L1 -1584 4562 3979 * 649 262 55 40 chr5 180254598 180255003 -22830529 + L1MEc LINE L1 2150 2515 -3700 343 321 0 27 chr5 180255109 180255221 -22830311 - LTR16A LTR ERVL -265 185 77 2174 280 78 29 chr5 180255316 180256439 -22829093 + L1M4 LINE L1 3845 5022 -1124 1319 188 36 43 chr5 180256439 180256742 -22828790 + AluJo SINE Alu 1 301 -1 437 121 0 137 chr5 180256816 180257006 -22828526 - AluSq SINE Alu -27 286 123 11103 156 12 5 chr5 180257357 180259705 -22825827 + L1P4 LINE L1 3333 5698 -463 27 62 0 0 chr5 180259920 180259968 -22825564 + AT_rich Low_complexity Low_complexity 1 48 0 26 0 0 0 chr5 180259999 180260025 -22825507 + AT_rich Low_complexity Low_complexity 1 26 0 364 288 98 97 chr5 180260658 180261227 -22824305 + L1M2 LINE L1 529 1098 -5751 380 320 0 20 chr5 180263311 180263514 -22822018 + L1PA5 LINE L1 5956 6154 0 1125 68 54 0 chr5 180263538 180263685 -22821847 - L1PA5 LINE L1 -170 5984 5830 1928 188 25 17 chr5 180263908 180264270 -22821262 + MLT1A1 LTR MaLR 1 365 0 884 151 10 88 chr5 180264274 180264441 -22821091 + MLT1A1-int LTR MaLR 4 182 -1553 4346 109 46 10 chr5 180264441 180265054 -22820478 + MER41B LTR ERV1 1 635 0 884 151 10 88 chr5 180265054 180265082 -22820450 + MLT1A1-int LTR MaLR 182 185 -1550 6485 53 3 3 chr5 180265082 180265841 -22819691 + L1PA6 LINE L1 5395 6153 -1 4146 116 7 18 chr5 180265870 180266017 -22819515 + Tigger1 DNA MER2_type 1725 1872 -546 1647 95 22 30 chr5 180266017 180266249 -22819283 - MER30 DNA MER1_type 0 230 1 4146 116 7 18 chr5 180266249 180266720 -22818812 + Tigger1 DNA MER2_type 1872 2336 -82 5528 205 161 29 chr5 180266728 180268110 -22817422 + MLT1A1-int LTR MaLR 167 1730 -5 1690 178 108 9 chr5 180268114 180268446 -22817086 + MLT1A1 LTR MaLR 1 365 0 262 333 39 0 chr5 180268461 180268539 -22816993 + L2 LINE L2 3189 3269 -3 180 349 0 0 chr5 180269269 180269332 -22816200 - L2 LINE L2 0 3313 3251 * 285 186 0 34 chr5 180269299 180269358 -22816174 - MIR SINE MIR -24 238 182 255 315 40 67 chr5 180269374 180269455 -22816077 + MIR SINE MIR 39 116 -146 2001 107 0 4 chr5 180269455 180269726 -22815806 - AluSc SINE Alu -3 306 37 255 315 40 67 chr5 180269726 180269793 -22815739 + MIR SINE MIR 116 183 -79 479 320 16 7 chr5 180269976 180270125 -22815407 + MIR SINE MIR 36 185 -62 542 239 38 57 chr5 180270197 180270356 -22815176 - MIR SINE MIR -70 192 37 1844 179 3 3 chr5 180270457 180270759 -22814773 + AluSx SINE Alu 1 302 -10 483 304 178 39 chr5 180270934 180271322 -22814210 + MLT1J1 LTR MaLR 1 442 -4 189 292 22 45 chr5 180271339 180271428 -22814104 - L3 LINE CR1 -89 1488 1402 705 259 46 59 chr5 180271429 180271734 -22813798 - L2 LINE L2 0 3313 3013 224 291 46 66 chr5 180271772 180271923 -22813609 - L3 LINE CR1 -199 1378 1231 1737 124 9 100 chr5 180273061 180273431 -22812101 - AluSx SINE Alu 0 341 2 531 193 101 0 chr5 180273432 180273541 -22811991 + MER96 DNA MER1_type? 43 162 -13 626 224 125 73 chr5 180273729 180274001 -22811531 + MER102a DNA MER1_type 45 330 0 615 160 0 0 chr5 180274995 180275089 -22810443 - FRAM SINE Alu -83 93 1 823 276 187 23 chr5 180275457 180276036 -22809496 - L2 LINE L2 0 3313 2633 1043 210 63 105 chr5 180276038 180276400 -22809132 - MLT1A2 LTR MaLR -4 370 24 1482 153 4 4 chr5 180276603 180276832 -22808700 + AluSx SINE Alu 1 229 -83 713 171 23 11 chr5 180276884 180277059 -22808473 + GA-rich Low_complexity Low_complexity 2 178 0 422 204 86 0 chr5 180277507 180277600 -22807932 - MLT1H1 LTR MaLR 0 555 455 206 152 0 0 chr5 180277640 180277673 -22807859 - L2 LINE L2 -8 3305 3273 238 335 53 57 chr5 180277699 180277944 -22807588 - L2 LINE L2 -367 2947 2704 554 251 137 10 chr5 180278603 180278805 -22806727 - MIR SINE MIR -34 228 2 385 285 42 0 chr5 180278920 180279050 -22806482 + MIR SINE MIR 59 194 -62 1910 152 82 79 chr5 180279584 180279879 -22805653 - MLT1C LTR MaLR 0 467 169 1949 158 6 3 chr5 180279879 180280190 -22805342 - AluJb SINE Alu 0 312 1 1910 152 82 79 chr5 180280190 180280360 -22805172 - MLT1C LTR MaLR -298 169 1 266 336 101 17 chr5 180280396 180280515 -22805017 + MIR3 SINE MIR 34 162 -46 413 248 73 0 chr5 180280647 180280756 -22804776 - MER103 DNA DNA -46 120 4 274 259 0 0 chr5 180280881 180280939 -22804593 + LTR16C LTR ERVL 434 491 0 281 234 43 11 chr5 180281001 180281095 -22804437 - HAL1b LINE L1 -9 1339 1243 2169 137 0 3 chr5 180281137 180281450 -22804082 - AluSx SINE Alu 0 312 1 244 291 170 48 chr5 180281659 180281889 -22803643 - MIR SINE MIR -4 258 1 934 316 42 41 chr5 180281927 180282469 -22803063 + LTR67 LTR ERVL 12 554 -3 333 186 174 0 chr5 180282811 180282897 -22802635 - Charlie1b DNA MER1_type 0 523 423 * 1308 195 81 0 chr5 180282895 180283156 -22802376 - Charlie1b DNA MER1_type -241 282 1 205 302 0 0 chr5 180283336 180283379 -22802153 + MIR SINE MIR 61 103 -105 473 275 75 109 chr5 180283547 180284024 -22801508 - MLT1K LTR MaLR 0 588 128 294 273 20 10 chr5 180284268 180284367 -22801165 + L1MC4 LINE L1 6612 6711 -1331 277 365 0 10 chr5 180285634 180285738 -22799794 + L3 LINE CR1 1250 1352 -225 193 256 61 12 chr5 180286235 180286317 -22799215 - L2 LINE L2 -340 2974 2889 2371 95 0 3 chr5 180286864 180287170 -22798362 + AluY SINE Alu 1 305 -6 1122 234 90 80 chr5 180287366 180287867 -22797665 + MLT1J LTR MaLR 1 506 -5 755 306 91 41 chr5 180287933 180288371 -22797161 - L2 LINE L2 -2 3311 2852 283 262 99 64 chr5 180288945 180289117 -22796415 - MER5A DNA MER1_type 0 178 1 421 229 120 22 chr5 180289213 180289396 -22796136 + L2 LINE L2 1049 1249 -2065 2451 268 99 45 chr5 180289409 180290942 -22794590 + L2 LINE L2 1534 3162 -151 2465 177 63 4 chr5 180290942 180291417 -22794115 + MLT1D LTR MaLR 3 505 0 2451 268 99 45 chr5 180291417 180291577 -22793955 + L2 LINE L2 3162 3312 -1 2280 107 17 0 chr5 180291655 180291953 -22793579 + AluSg SINE Alu 1 303 -7 487 264 186 33 chr5 180292529 180292863 -22792669 - MLT1K LTR MaLR -12 576 192 630 292 170 13 chr5 180293060 180293454 -22792078 - L3 LINE CR1 -85 1492 1037 231 157 0 0 chr5 180293835 180293886 -22791646 + CT-rich Low_complexity Low_complexity 2 52 0 533 219 0 0 chr5 180293969 180294065 -22791467 + AluJ/FLAM SINE Alu 2 97 -215 481 353 50 40 chr5 180294085 180294462 -22791070 - L3 LINE CR1 -595 982 602 186 286 103 8 chr5 180294541 180294667 -22790865 - L3 LINE CR1 -1113 464 327 237 288 55 0 chr5 180295000 180295073 -22790459 - MER2 DNA MER2_type -2 343 267 2155 150 3 0 chr5 180295154 180295487 -22790045 + MER7A DNA MER2_type 14 345 -1 1101 143 0 0 chr5 180295493 180295654 -22789878 - MER2 DNA MER2_type -182 163 3 359 286 35 37 chr5 180295655 180295945 -22789587 + MLT1I LTR MaLR 69 390 -19 503 230 14 36 chr5 180296501 180296640 -22788892 - MER103 DNA DNA -28 138 3 425 225 8 50 chr5 180297197 180297317 -22788215 - MIR3 SINE MIR -7 201 87 542 352 78 16 chr5 180297594 180297915 -22787617 + L2 LINE L2 2633 2973 -341 231 337 0 12 chr5 180297916 180297999 -22787533 + (CATA)n Simple_repeat Simple_repeat 3 84 0 340 346 31 0 chr5 180298187 180298314 -22787218 + L2 LINE L2 3141 3271 -1 751 143 17 17 chr5 180300516 180300635 -22784897 + FLAM_C SINE Alu 2 120 -23 354 257 106 34 chr5 180300648 180300827 -22784705 - L2 LINE L2 -15 3298 3107 576 219 104 38 chr5 180300990 180301173 -22784359 + MIR SINE MIR 52 246 -16 337 259 29 9 chr5 180301382 180301503 -22784029 + MIR SINE MIR 30 151 -62 469 213 128 27 chr5 180301734 180301897 -22783635 - MER5A DNA MER1_type -2 187 4 699 253 0 12 chr5 180302041 180302207 -22783325 - MIR SINE MIR -19 243 80 666 288 95 0 chr5 180302465 180302687 -22782845 + MIR SINE MIR 4 246 -16 506 202 24 8 chr5 180303534 180303658 -22781874 - MER113 DNA MER1_type? -111 410 285 536 286 0 0 chr5 180303679 180303833 -22781699 + MIR SINE MIR 40 193 -69 793 242 96 0 chr5 180303885 180304125 -22781407 - MER113 DNA MER1_type? -254 267 5 473 227 18 0 chr5 180304128 180304238 -22781294 - MIR3 SINE MIR -48 160 49 11800 33 7 0 chr5 180304280 180306424 -22779108 + L1PA4 LINE L1 3988 6142 -13 21 0 0 0 chr5 180306528 180306549 -22778983 + AT_rich Low_complexity Low_complexity 1 21 0 829 282 62 16 chr5 180307287 180307592 -22777940 - MER102b DNA MER1_type -3 338 20 226 235 20 0 chr5 180307910 180307961 -22777571 + L2 LINE L2 3219 3270 -2 418 306 25 6 chr5 180308171 180308328 -22777204 + MIR SINE MIR 32 191 -71 733 262 89 0 chr5 180308976 180309201 -22776331 + MIR SINE MIR 13 257 -5 283 272 0 120 chr5 180309530 180309655 -22775877 - MIR SINE MIR -56 152 43 24 67 0 0 chr5 180309670 180309715 -22775817 + AT_rich Low_complexity Low_complexity 1 45 0 669 260 63 22 chr5 180310112 180310335 -22775197 - MIR SINE MIR -16 246 15 22 0 0 0 chr5 180311373 180311395 -22774137 + AT_rich Low_complexity Low_complexity 1 22 0 193 220 40 0 chr5 180312396 180312446 -22773086 + L2 LINE L2 3207 3258 -14 860 258 114 3 chr5 180312626 180313003 -22772529 - LTR16C LTR ERVL -13 478 45 232 247 26 13 chr5 180313040 180313117 -22772415 + L2 LINE L2 3236 3313 0 22 0 0 0 chr5 180313144 180313166 -22772366 + AT_rich Low_complexity Low_complexity 1 22 0 415 260 47 24 chr5 180314379 180314506 -22771026 - MIR SINE MIR -60 148 19 22 0 0 0 chr5 180314584 180314606 -22770926 + AT_rich Low_complexity Low_complexity 1 22 0 195 204 61 0 chr5 180314606 180314655 -22770877 + L2 LINE L2 3216 3267 -5 652 222 8 8 chr5 180314721 180314847 -22770685 - FLAM_A SINE Alu -7 126 1 2323 98 16 0 chr5 180315624 180315931 -22769601 - AluSx SINE Alu 0 312 1 552 226 66 6 chr5 180315951 180316127 -22769405 - MIR SINE MIR -41 221 34 675 289 83 0 chr5 180316172 180316376 -22769156 - MIR SINE MIR -26 236 16 1808 130 57 20 chr5 180316499 180316798 -22768734 - AluSx SINE Alu -2 310 1 595 203 36 7 chr5 180317372 180317510 -22768022 + MIR3 SINE MIR 66 207 -1 1114 166 47 24 chr5 180318667 180318878 -22766654 + AluJb SINE Alu 85 300 -12 2020 121 45 0 chr5 180318884 180319173 -22766359 + AluSx SINE Alu 3 304 -8 182 321 0 0 chr5 180319173 180319229 -22766303 - L2 LINE L2 -83 3189 3134 207 174 0 65 chr5 180320034 180320080 -22765452 + polypyrimidine Low_complexity Low_complexity 3 45 0 479 269 22 0 chr5 180320600 180320734 -22764798 + MIR SINE MIR 60 196 -66 181 263 0 0 chr5 180321507 180321545 -22763987 + MIR SINE MIR 87 124 -84 190 385 0 18 chr5 180321766 180321875 -22763657 + L3 LINE CR1 1028 1134 -443 352 358 110 4 chr5 180321927 180322173 -22763359 + L3 LINE CR1 1264 1535 -42 918 258 18 4 chr5 180322234 180322463 -22763069 + MIR SINE MIR 29 260 -2 369 292 34 64 chr5 180322510 180322777 -22762755 - L2 LINE L2 -40 3273 3015 186 103 0 0 chr5 180323014 180323043 -22762489 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr5 180323773 180323794 -22761738 + AT_rich Low_complexity Low_complexity 1 21 0 1008 219 135 58 chr5 180323890 180324319 -22761213 - MLT1C LTR MaLR 0 467 6 26 0 0 0 chr5 180324720 180324746 -22760786 + AT_rich Low_complexity Low_complexity 1 26 0 418 226 149 83 chr5 180324830 180325011 -22760521 - LTR33A LTR ERVL -302 221 29 393 272 22 15 chr5 180325051 180325187 -22760345 - MIR SINE MIR -106 156 20 4275 55 0 0 chr5 180325345 180325856 -22759676 - L1PA8 LINE L1 -23 6149 5639 473 252 121 22 chr5 180325870 180326157 -22759375 + LTR16A LTR ERVL 3 372 -78 476 285 37 41 chr5 180328102 180328344 -22757188 + MER102a DNA MER1_type 90 330 0 748 251 118 58 chr5 180328410 180328471 -22757061 - MLT1L LTR MaLR -7 608 552 2114 121 3 0 chr5 180328471 180328775 -22756757 + AluSx SINE Alu 1 305 0 748 251 118 58 chr5 180328775 180329213 -22756319 - MLT1L LTR MaLR -63 552 34 597 351 12 12 chr5 180330173 180330432 -22755100 - MIR SINE MIR -1 261 3 331 294 79 31 chr5 180331201 180331328 -22754204 - MIR SINE MIR -62 146 15 184 318 63 0 chr5 180331433 180331496 -22754036 - L2 LINE L2 -49 3264 3198 2184 120 0 0 chr5 180332278 180332578 -22752954 + AluSx SINE Alu 1 300 -12 225 287 165 18 chr5 180332899 180333063 -22752469 - MIR SINE MIR -36 226 39 * 703 295 81 34 chr5 180333047 180333342 -22752190 - L3 LINE CR1 -12 1565 1257 201 247 49 37 chr5 180333410 180333491 -22752041 + L2 LINE L2 3190 3271 -1 1479 6 0 0 chr5 180333614 180333772 -22751760 + AluYb8 SINE Alu 158 315 -3 372 22 0 0 chr5 180333864 180333909 -22751623 + (TC)n Simple_repeat Simple_repeat 2 46 0 274 227 210 9 chr5 180334974 180335090 -22750442 - MIR SINE MIR -68 140 16 204 40 0 0 chr5 180335423 180335448 -22750084 + (GA)n Simple_repeat Simple_repeat 2 26 0 182 271 0 0 chr5 180336230 180336278 -22749254 + MIR3 SINE MIR 159 206 -2 2120 179 8 26 chr5 180336822 180337201 -22748331 + MSTD LTR MaLR 25 396 0 207 219 0 0 chr5 180337751 180337792 -22747740 + (TAA)n Simple_repeat Simple_repeat 2 42 0 930 290 124 24 chr5 180337825 180338367 -22747165 + MLT1L LTR MaLR 20 615 0 666 325 21 8 chr5 180338367 180338601 -22746931 - MIR SINE MIR -22 240 4 222 118 0 0 chr5 180339427 180339461 -22746071 + (TA)n Simple_repeat Simple_repeat 2 35 0 195 69 0 0 chr5 180339546 180339575 -22745957 + (ATG)n Simple_repeat Simple_repeat 3 31 0 299 247 65 11 chr5 180340228 180340321 -22745211 + MLT1L LTR MaLR 509 606 -9 421 257 35 26 chr5 180340582 180340695 -22744837 - MIR3 SINE MIR -50 158 45 622 244 108 25 chr5 180341063 180341342 -22744190 - LTR33A LTR ERVL 0 523 222 282 258 65 11 chr5 180341432 180341525 -22744007 + MLT1L LTR MaLR 509 606 -9 298 337 63 11 chr5 180341626 180341801 -22743731 - LTR33A LTR ERVL -337 186 3 482 298 186 18 chr5 180341957 180342232 -22743300 + LTR67 LTR ERVL 2 322 -235 461 216 9 9 chr5 180342301 180342412 -22743120 + LTR67 LTR ERVL 434 544 -13 1444 282 99 41 chr5 180342936 180343493 -22742039 - MLT1G1 LTR MaLR -6 589 1 2075 108 0 0 chr5 180344519 180344806 -22740726 + AluSg SINE Alu 1 287 -23 5689 82 3 1 chr5 180344896 180345635 -22739897 - L1PA11 LINE L1 -18 6156 5417 183 356 0 0 chr5 180346193 180346252 -22739280 - L2 LINE L2 -1 3271 3213 463 261 99 57 chr5 180346734 180346860 -22738672 - L2 LINE L2 -17 3296 3156 685 294 8 78 chr5 180346860 180347217 -22738315 - MER46C DNA MER2_type -3 335 4 463 261 99 57 chr5 180347217 180347301 -22738231 - L2 LINE L2 -157 3156 3077 200 350 68 10 chr5 180347300 180347403 -22738129 - MIR SINE MIR -35 227 119 * 461 253 58 0 chr5 180347479 180347633 -22737899 + MER113 DNA MER1_type? 33 195 -326 378 297 84 31 chr5 180347916 180348122 -22737410 - MIR SINE MIR -36 226 6 765 61 30 0 chr5 180348145 180348244 -22737288 + L1PA11 LINE L1 6073 6174 0 592 101 0 0 chr5 180348398 180348477 -22737055 + AluS SINE Alu 2 80 -233 457 289 23 16 chr5 180348481 180348609 -22736923 + L2 LINE L2 3185 3313 0 461 141 0 0 chr5 180348646 180348717 -22736815 + L2 LINE L2 3202 3272 0 256 344 21 0 chr5 180349606 180349702 -22735830 - MIR SINE MIR -78 130 33 2232 94 0 0 chr5 180349768 180350066 -22735466 + AluSg SINE Alu 1 298 -12 375 266 0 21 chr5 180350289 180350383 -22735149 + MIR3 SINE MIR 110 201 -7 180 152 0 0 chr5 180350579 180350612 -22734920 + C-rich Low_complexity Low_complexity 4 36 0 1578 160 18 21 chr5 180351426 180351707 -22733825 + AluJb SINE Alu 1 280 -32 993 122 11 11 chr5 180351708 180351888 -22733644 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 304 211 0 0 chr5 180351933 180351990 -22733542 + MER117 DNA MER1_type 72 128 -69 483 281 37 7 chr5 180352108 180352243 -22733289 - MER91C DNA MER1_type 0 140 2 316 353 16 8 chr5 180352347 180352469 -22733063 + MIR3 SINE MIR 58 180 -28 636 321 73 23 chr5 180352496 180353114 -22732418 - L1M4 LINE L1 -1168 4978 4317 397 276 84 39 chr5 180353399 180353602 -22731930 + MARNA DNA Mariner 307 518 -68 4332 156 62 12 chr5 180355298 180356127 -22729405 + L1MB2 LINE L1 5302 6171 0 224 313 126 55 chr5 180356192 180356374 -22729158 + L2 LINE L2 3077 3271 -1 181 213 128 0 chr5 180356392 180356439 -22729093 + MIR SINE MIR 118 170 -92 221 310 28 0 chr5 180356977 180357048 -22728484 + MIR SINE MIR 176 248 -14 394 210 150 0 chr5 180357102 180357202 -22728330 - MIR SINE MIR -78 184 70 242 299 122 0 chr5 180357606 180357753 -22727779 + L1ME4a LINE L1 5946 6110 -11 507 225 174 37 chr5 180357797 180357965 -22727567 + MIR3 SINE MIR 6 194 -14 243 309 41 21 chr5 180358221 180358318 -22727214 - MIR SINE MIR 0 262 164 183 80 0 0 chr5 180359124 180359149 -22726383 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 354 321 82 8 chr5 180359151 180359285 -22726247 - L2 LINE L2 -12 3260 3117 2001 125 7 0 chr5 180359488 180359776 -22725756 - AluSx SINE Alu -17 295 6 532 318 62 11 chr5 180360064 180360243 -22725289 + MER5A DNA MER1_type 2 189 0 412 186 69 20 chr5 180360976 180361078 -22724454 + MIR SINE MIR 156 262 0 864 186 126 6 chr5 180361275 180361458 -22724074 - MIR SINE MIR -1 261 57 270 0 0 0 chr5 180361583 180361613 -22723919 + (CA)n Simple_repeat Simple_repeat 1 30 0 559 271 81 38 chr5 180361835 180361945 -22723587 + MIR SINE MIR 39 143 -119 1656 167 167 24 chr5 180361945 180362322 -22723210 + MSTB1 LTR MaLR 2 432 0 559 271 81 38 chr5 180362322 180362421 -22723111 + MIR SINE MIR 143 257 -5 230 179 18 0 chr5 180363675 180363731 -22721801 + (CATA)n Simple_repeat Simple_repeat 2 58 0 476 264 41 91 chr5 180363774 180363994 -22721538 - MIR SINE MIR -14 248 40 351 216 22 127 chr5 180364080 180364157 -22721375 + MIR3 SINE MIR 89 148 -60 1194 213 5 0 chr5 180364157 180364373 -22721159 - MER58A DNA MER1_type -4 220 4 351 216 22 127 chr5 180364373 180364429 -22721103 + MIR3 SINE MIR 148 208 0 239 239 0 0 chr5 180364503 180364570 -22720962 + T-rich Low_complexity Low_complexity 1 67 0 912 243 0 12 chr5 180365529 180365728 -22719804 + MIR SINE MIR 49 241 -21 882 229 67 14 chr5 180365746 180365969 -22719563 - MIR SINE MIR -26 236 2 180 314 0 57 chr5 180365969 180366035 -22719497 - MIR SINE MIR -112 96 35 785 267 82 0 chr5 180366256 180366462 -22719070 + MIR SINE MIR 20 242 -20 188 284 110 55 chr5 180367779 180367888 -22717644 - L3 LINE CR1 -29 1548 1434 214 230 120 70 chr5 180367928 180368028 -22717504 + MIR3 SINE MIR 7 111 -97 262 281 163 25 chr5 180368538 180368698 -22716834 + MIR SINE MIR 64 245 -17 389 344 70 37 chr5 180368807 180369048 -22716484 + MIR SINE MIR 3 251 -11 677 293 54 30 chr5 180369250 180369584 -22715948 + L2 LINE L2 2972 3313 0 24 53 0 0 chr5 180369913 180369951 -22715581 + GC_rich Low_complexity Low_complexity 1 38 0 29 84 0 0 chr5 180370204 180370275 -22715257 + GC_rich Low_complexity Low_complexity 1 71 0 209 330 82 0 chr5 180373922 180374019 -22711513 - L2 LINE L2 -1 3312 3208 288 310 43 17 chr5 180374126 180374242 -22711290 - L2 LINE L2 -237 3035 2917 430 260 7 78 chr5 180374289 180374443 -22711089 - MIR SINE MIR -60 202 60 1788 151 0 4 chr5 180374514 180374793 -22710739 + AluJo SINE Alu 1 278 -34 1560 32 0 5 chr5 180374793 180374979 -22710553 + L1PA4 LINE L1 5971 6155 0 987 229 186 8 chr5 180475896 180476262 -22609270 + MLT1H LTR MaLR 115 545 -4 502 333 94 43 chr5 180476371 180476786 -22608746 + L2 LINE L2 2832 3267 -5 192 321 0 0 chr5 180477057 180477113 -22608419 + L2 LINE L2 3209 3264 -8 237 65 0 0 chr5 180477115 180477146 -22608386 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 334 214 180 0 chr5 180477422 180477511 -22608021 + MER81 DNA DNA 4 108 -6 320 209 11 22 chr5 180478913 180479004 -22606528 + (CCCCG)n Simple_repeat Simple_repeat 5 94 0 278 321 28 0 chr5 180479270 180479379 -22606153 - L2 LINE L2 -2 3311 3200 1749 164 0 27 chr5 180479753 180480052 -22605480 + AluJo SINE Alu 9 299 -13 527 88 20 29 chr5 180480072 180480174 -22605358 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 194 272 16 80 chr5 180480218 180480343 -22605189 + MIR SINE MIR 56 172 -90 331 289 125 8 chr5 180481046 180481174 -22604358 + MIR3 SINE MIR 34 176 -32 417 342 60 60 chr5 180481447 180481766 -22603766 + L2 LINE L2 2949 3267 -5 2143 91 11 4 chr5 180481976 180482250 -22603282 + AluSq SINE Alu 24 299 -14 247 255 98 20 chr5 180482384 180482486 -22603046 - MIR SINE MIR -65 197 88 566 179 0 0 chr5 180482890 180482985 -22602547 + AluSg/x SINE Alu 185 279 -33 249 33 0 0 chr5 180482987 180483017 -22602515 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 293 238 79 0 chr5 180483018 180483119 -22602413 + MIR SINE MIR 154 262 0 2277 110 0 0 chr5 180483123 180483415 -22602117 - AluSx SINE Alu -20 292 1 14728 119 31 26 chr5 180483416 180485718 -22599814 + Tigger2 DNA MER2_type 406 2718 0 290 315 31 31 chr5 180485833 180485960 -22599572 + L2 LINE L2 2935 3061 -211 2731 204 73 35 chr5 180486043 180486373 -22599159 + MER82 DNA MER2_type 2 318 -335 441 0 0 0 chr5 180486373 180486422 -22599110 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1924 141 0 14 chr5 180486422 180486705 -22598827 - AluSx SINE Alu -33 279 1 2731 204 73 35 chr5 180486705 180487001 -22598531 + MER82 DNA MER2_type 317 653 0 1170 259 103 37 chr5 180487063 180487405 -22598127 + LTR33 LTR ERVL 1 386 -135 1888 194 14 30 chr5 180487405 180487776 -22597756 - MLT1A1 LTR MaLR 0 365 1 1170 259 103 37 chr5 180487776 180487919 -22597613 + LTR33 LTR ERVL 386 518 -3 369 0 0 0 chr5 180489099 180489140 -22596392 + (CA)n Simple_repeat Simple_repeat 2 42 0 513 177 171 11 chr5 180489310 180489467 -22596065 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 180490443 180490465 -22595067 + AT_rich Low_complexity Low_complexity 1 22 0 444 324 29 6 chr5 180490926 180491096 -22594436 + MIR SINE MIR 2 175 -87 862 239 5 5 chr5 180492573 180492757 -22592775 + MIR SINE MIR 12 195 -67 4049 167 47 106 chr5 180492758 180494248 -22591284 + L1MC1 LINE L1 4353 5692 -641 1565 170 56 7 chr5 180494248 180494518 -22591014 + AluSx SINE Alu 16 298 -14 4049 167 47 106 chr5 180494518 180495079 -22590453 + L1MC1 LINE L1 5692 6284 -49 451 258 171 67 chr5 180496434 180496732 -22588800 - MER102a DNA MER1_type -1 329 1 401 295 0 9 chr5 180496899 180497011 -22588521 + MER5A DNA MER1_type 7 117 -72 192 232 71 81 chr5 180497172 180497262 -22588270 - MIR SINE MIR -70 138 48 880 256 27 127 chr5 180498181 180498670 -22586862 + L2 LINE L2 2874 3313 0 223 274 78 0 chr5 180498699 180498750 -22586782 - L2 LINE L2 -62 3210 3156 2196 114 0 3 chr5 180499791 180500090 -22585442 - AluSg SINE Alu -12 298 1 340 289 21 10 chr5 180500095 180500192 -22585340 - MER5A DNA MER1_type -7 182 85 237 103 46 23 chr5 180500243 180500291 -22585241 - MIR SINE MIR -56 152 103 441 245 55 35 chr5 180500948 180501148 -22584384 - L2 LINE L2 -386 2928 2725 284 222 0 0 chr5 180501865 180501919 -22583613 + L2 LINE L2 3215 3268 -4 316 292 11 0 chr5 180501926 180502015 -22583517 + MIR3 SINE MIR 113 202 -6 241 216 59 0 chr5 180502138 180502189 -22583343 - L2 LINE L2 -22 3291 3238 515 255 41 87 chr5 180502200 180502275 -22583257 + MER5A DNA MER1_type 1 78 -111 1729 128 69 11 chr5 180502275 180502549 -22582983 + AluJo SINE Alu 1 290 -22 515 255 41 87 chr5 180502549 180502669 -22582863 + MER5A DNA MER1_type 78 187 -2 287 169 32 145 chr5 180502733 180502857 -22582675 - MER102b DNA MER1_type 0 341 232 212 310 0 0 chr5 180503023 180503081 -22582451 + L2 LINE L2 3251 3308 -5 34 65 0 0 chr5 180503621 180503683 -22581849 + AT_rich Low_complexity Low_complexity 1 62 0 2285 138 37 105 chr5 180503742 180503796 -22581736 + MSTB LTR MaLR 1 57 -369 2275 119 0 0 chr5 180503796 180504106 -22581426 + AluSx SINE Alu 1 310 -2 2285 138 37 105 chr5 180504106 180504508 -22581024 + MSTB LTR MaLR 57 426 0 1877 127 21 7 chr5 180504535 180504818 -22580714 - MER1B DNA MER1_type 0 339 53 654 263 21 10 chr5 180505078 180505272 -22580260 + MER117 DNA MER1_type 1 196 -1 3109 169 55 2 chr5 180505360 180505892 -22579640 + MER68 LTR ERV1 3 562 0 233 325 148 15 chr5 180506265 180506468 -22579064 + MIR SINE MIR 28 257 -5 326 309 149 6 chr5 180507179 180507354 -22578178 - MIR SINE MIR -18 244 45 3588 152 58 10 chr5 180507489 180508096 -22577436 - L1PA16 LINE L1 -13 6153 5518 2128 134 0 3 chr5 180508645 180508943 -22576589 - AluSx SINE Alu -15 297 1 239 67 0 0 chr5 180508975 180509005 -22576527 + MIR SINE MIR 115 144 -64 324 270 57 11 chr5 180509760 180509858 -22575674 - MER5A DNA MER1_type -62 125 15 383 241 23 0 chr5 180509914 180510001 -22575531 - L2 LINE L2 0 3313 3225 2636 77 0 34 chr5 180510088 180510439 -22575093 - L1PA7 LINE L1 0 6154 5816 619 40 0 0 chr5 180510439 180510514 -22575018 + L1PA7 LINE L1 5735 5809 -345 2199 124 0 3 chr5 180510753 180511059 -22574473 + AluSx SINE Alu 1 305 -7 465 19 0 0 chr5 180511059 180511113 -22574419 + (TA)n Simple_repeat Simple_repeat 2 55 0 468 256 45 28 chr5 180511405 180511564 -22573968 - MER5A DNA MER1_type -15 163 16 383 324 44 0 chr5 180511834 180511970 -22573562 - MIR3 SINE MIR -51 157 16 213 39 0 0 chr5 180512425 180512451 -22573081 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 868 233 39 11 chr5 180512453 180512633 -22572899 - AluJo SINE Alu -19 293 109 21 57 0 0 chr5 180512812 180512847 -22572685 + AT_rich Low_complexity Low_complexity 1 35 0 433 216 82 8 chr5 180512945 180513079 -22572453 + L1MC5 LINE L1 7810 7953 -8 236 221 44 29 chr5 180513626 180513694 -22571838 + MER117 DNA MER1_type 13 81 -116 280 287 65 19 chr5 180513802 180513910 -22571622 - MIR3 SINE MIR -46 162 50 4383 200 64 68 chr5 180514690 180515119 -22570413 - L1MC4 LINE L1 0 8042 7613 2134 113 3 3 chr5 180515119 180515410 -22570122 - AluSp SINE Alu -22 291 1 4383 200 64 68 chr5 180515410 180516116 -22569416 - L1MC4 LINE L1 -429 7613 6911 1744 176 30 7 chr5 180516116 180516412 -22569120 + AluJb SINE Alu 3 305 -7 4383 200 64 68 chr5 180516412 180516580 -22568952 - L1MC4 LINE L1 -1131 6911 6744 2361 82 0 32 chr5 180516903 180517218 -22568314 + AluSg SINE Alu 1 305 -5 247 312 26 0 chr5 180517792 180517869 -22567663 + MIR3 SINE MIR 95 173 -35 1710 148 3 69 chr5 180517921 180518253 -22567279 + AluJb SINE Alu 1 312 0 355 268 78 42 chr5 180518434 180518576 -22566956 - MER117 DNA MER1_type -49 148 2 269 246 49 57 chr5 180518751 180518873 -22566659 - MIR SINE MIR -50 212 92 288 243 48 176 chr5 180519621 180519745 -22565787 + L1MC4a LINE L1 5518 5656 -2152 1778 195 0 3 chr5 180519745 180520047 -22565485 + AluJb SINE Alu 1 301 -11 288 243 48 176 chr5 180520047 180520255 -22565277 + L1MC4a LINE L1 5656 5783 -2025 2143 96 0 17 chr5 180520255 180520547 -22564985 - AluSx SINE Alu -25 287 1 288 243 48 176 chr5 180520547 180520650 -22564882 + L1MC4a LINE L1 5783 5898 -1910 2125 128 0 0 chr5 180520742 180521039 -22564493 - AluSx SINE Alu -15 297 1 396 289 66 5 chr5 180521226 180521423 -22564109 + L1ME4a LINE L1 5678 5886 -235 363 255 38 9 chr5 180522564 180522670 -22562862 - MIR3 SINE MIR -8 200 92 995 92 0 23 chr5 180523041 180523171 -22562361 - FLAM_C SINE Alu -5 128 2 1568 197 130 48 chr5 180523541 180524003 -22561529 + MER20B DNA MER1_type 173 672 -111 1057 156 0 0 chr5 180524005 180524178 -22561354 + AluJo SINE Alu 124 296 -16 581 200 0 8 chr5 180524197 180524322 -22561210 + MER20B DNA MER1_type 659 782 -1 2328 117 0 0 chr5 180525628 180525935 -22559597 + AluSq SINE Alu 1 307 -6 907 196 0 12 chr5 180526084 180526252 -22559280 - MER5A DNA MER1_type -21 168 3 206 316 0 13 chr5 180526291 180526367 -22559165 + MIR SINE MIR 71 145 -63 1893 143 3 17 chr5 180526511 180526812 -22558720 - AluJo SINE Alu -10 302 6 208 191 0 43 chr5 180527734 180527781 -22557751 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 248 121 72 12 chr5 180527787 180527870 -22557662 + CT-rich Low_complexity Low_complexity 2 89 0 328 318 78 26 chr5 180527986 180528140 -22557392 + L3 LINE CR1 1352 1513 -64 215 288 100 0 chr5 180528267 180528347 -22557185 + MIR SINE MIR 32 119 -89 258 258 93 73 chr5 180528588 180528739 -22556793 - MIR SINE MIR -4 258 105 397 281 29 82 chr5 180529214 180529385 -22556147 - MIR3 SINE MIR -9 199 38 579 229 159 6 chr5 180530365 180530522 -22555010 - MER5A DNA MER1_type 0 189 9 278 308 63 56 chr5 180531041 180531184 -22554348 + MIR3 SINE MIR 34 177 -31 1840 153 0 18 chr5 180531362 180531644 -22553888 + AluJo SINE Alu 5 281 -31 2162 138 26 35 chr5 180531644 180532021 -22553511 + THE1C LTR MaLR 2 375 0 196 224 0 82 chr5 180532059 180532108 -22553424 + MIR3 SINE MIR 152 196 -12 1477 129 39 126 chr5 180532169 180532502 -22553030 - AluJb SINE Alu -8 304 1 332 247 22 107 chr5 180532596 180532774 -22552758 - MIR SINE MIR -67 195 33 580 260 160 18 chr5 180532789 180533008 -22552524 - MIR SINE MIR 0 262 13 556 250 44 56 chr5 180533137 180533317 -22552215 - MIR SINE MIR -81 181 4 593 156 10 0 chr5 180533318 180533414 -22552118 - MER58 DNA MER1_type -1 2419 2323 771 193 28 84 chr5 180534123 180534257 -22551275 - L1MD3 LINE L1 -1 7994 7875 2227 8 0 0 chr5 180534257 180534493 -22551039 + L1PA2 LINE L1 5916 6151 -4 771 193 28 84 chr5 180534493 180534571 -22550961 - L1MD3 LINE L1 -120 7875 7794 821 242 50 10 chr5 180534836 180534850 -22550682 + MER3 DNA MER1_type 1 13 -196 2085 94 0 0 chr5 180534850 180535115 -22550417 + AluSg SINE Alu 33 297 -13 821 242 50 10 chr5 180535115 180535298 -22550234 + MER3 DNA MER1_type 13 206 -3 2123 102 20 3 chr5 180535696 180535989 -22549543 - AluSg SINE Alu -12 298 1 2717 180 9 34 chr5 180537059 180537363 -22548169 + Ricksha DNA DNA 91 378 -2868 2114 97 37 0 chr5 180537363 180537661 -22547871 + AluSx SINE Alu 1 309 -3 2717 180 9 34 chr5 180537661 180537884 -22547648 + Ricksha DNA DNA 378 605 -2641 475 169 0 13 chr5 180537873 180537950 -22547582 + Ricksha DNA DNA 2801 2876 -378 * 509 208 68 0 chr5 180538003 180538124 -22547408 - L1ME1 LINE L1 -1 6183 6048 5107 168 17 17 chr5 180538125 180538784 -22546748 + L1P LINE L1 3122 3783 -2363 1709 136 86 4 chr5 180538784 180539063 -22546469 + AluJb SINE Alu 1 302 -10 5107 168 17 17 chr5 180539063 180539359 -22546173 + L1P LINE L1 3782 4077 -2069 1793 131 10 13 chr5 180539359 180539657 -22545875 + Ricksha DNA DNA 2533 2829 -25 432 241 68 82 chr5 180539693 180539913 -22545619 + MIR SINE MIR 7 223 -39 2263 109 0 0 chr5 180540313 180540615 -22544917 - AluY SINE Alu -3 308 7 930 121 8 0 chr5 180540628 180540760 -22544772 - AluSq/x SINE Alu -179 133 1 1262 204 25 21 chr5 180540760 180541040 -22544492 + AluJo SINE Alu 27 307 -5 219 314 93 34 chr5 180541546 180541664 -22543868 + L2 LINE L2 3125 3249 -23 441 310 147 62 chr5 180541733 180542107 -22543425 - L2 LINE L2 0 3272 2867 666 148 35 14 chr5 180542177 180542319 -22543213 - Charlie5 DNA MER1_type -33 2579 2435 3817 133 28 12 chr5 180542322 180542526 -22543006 + L1PA15 LINE L1 5578 5777 -388 2026 138 3 0 chr5 180542526 180542832 -22542700 + AluSx SINE Alu 1 307 0 3817 133 28 12 chr5 180542832 180543199 -22542333 + L1PA15 LINE L1 5777 6159 -6 1204 266 33 46 chr5 180543203 180543442 -22542090 - L1M4 LINE L1 -1828 4318 4077 2211 121 13 0 chr5 180543442 180543740 -22541792 + AluSx SINE Alu 1 302 -10 1204 266 33 46 chr5 180543740 180544044 -22541488 - L1M4 LINE L1 -2069 4077 3782 452 159 156 113 chr5 180544051 180544226 -22541306 - MER33 DNA MER1_type -250 74 1 299 210 0 25 chr5 180544914 180544995 -22540537 + CT-rich Low_complexity Low_complexity 2 80 0 288 264 264 10 chr5 180545245 180545438 -22540094 - MIR SINE MIR -13 249 8 371 356 45 17 chr5 180545776 180545953 -22539579 + MIR SINE MIR 4 185 -77 1546 188 19 7 chr5 180545990 180546289 -22539243 + AluJb SINE Alu 9 310 0 233 146 21 0 chr5 180546712 180546760 -22538772 + A-rich Low_complexity Low_complexity 2 50 0 652 189 0 0 chr5 180546901 180547012 -22538520 - FLAM_C SINE Alu 0 143 33 232 217 0 14 chr5 180547012 180547081 -22538451 + L1ME4a LINE L1 6043 6110 -11 363 217 26 59 chr5 180547127 180547279 -22538253 + L1ME LINE L1 5644 5790 -331 560 301 134 28 chr5 180548531 180549275 -22536257 + L1MB4 LINE L1 5271 5857 -323 1612 275 70 29 chr5 180548585 180548880 -22536652 + L1MC4a LINE L1 5352 5633 -2175 1399 173 14 0 chr5 180548880 180549094 -22536438 - MER20 DNA MER1_type -2 217 1 1612 275 70 29 chr5 180549094 180549481 -22536051 + L1MC4a LINE L1 5633 6062 -1746 21 0 0 0 chr5 180549557 180549578 -22535954 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr5 180549962 180550004 -22535528 + MADE1 DNA Mariner 39 80 0 470 265 25 12 chr5 180550140 180550302 -22535230 + MER113 DNA MER1_type? 1 164 -357 222 309 57 32 chr5 180551002 180551125 -22534407 + MIR SINE MIR 89 214 -48 433 292 16 38 chr5 180551409 180551594 -22533938 + MIR SINE MIR 82 262 0 1623 174 4 22 chr5 180551826 180552101 -22533431 - AluJo SINE Alu -30 282 13 309 234 39 13 chr5 180552116 180552193 -22533339 - MIR3 SINE MIR -24 184 106 26 30 0 0 chr5 180552398 180552431 -22533101 + AT_rich Low_complexity Low_complexity 1 33 0 213 286 91 13 chr5 180552442 180552519 -22533013 - MIR3 SINE MIR -44 164 82 320 297 72 36 chr5 180553072 180553267 -22532265 + L1ME LINE L1 5557 5758 -363 610 69 0 0 chr5 180553819 180553931 -22531601 + AluSg/x SINE Alu 210 321 0 486 298 105 42 chr5 180553986 180554500 -22531032 + L2 LINE L2 2610 3163 -109 277 111 270 0 chr5 180554501 180554564 -22530968 + MADE1 DNA Mariner 1 80 0 356 313 0 0 chr5 180554578 180554661 -22530871 + L2 LINE L2 3190 3272 0 2067 152 0 3 chr5 180555340 180555649 -22529883 - AluSx SINE Alu -4 308 1 494 250 0 77 chr5 180556025 180556181 -22529351 - L2 LINE L2 -1 3312 3169 793 197 95 0 chr5 180556268 180556430 -22529102 + AluJb SINE Alu 132 306 0 334 143 299 0 chr5 180556475 180556552 -22528980 - MER96 DNA MER1_type? -75 100 1 521 311 95 30 chr5 180556552 180556857 -22528675 - L2 LINE L2 -372 2942 2618 1662 173 30 33 chr5 180556946 180557246 -22528286 + AluJb SINE Alu 1 299 -13 265 300 24 147 chr5 180557664 180557997 -22527535 - L2 LINE L2 -1 3271 2980 291 289 103 0 chr5 180558653 180558750 -22526782 + L2 LINE L2 3207 3313 0 431 331 69 53 chr5 180559058 180559568 -22525964 - L2 LINE L2 -672 2642 2125 198 0 0 0 chr5 180559999 180560021 -22525511 + (CAAGG)n Simple_repeat Simple_repeat 1 22 0 198 323 113 38 chr5 180560447 180560580 -22524952 - MIR3 SINE MIR -61 147 5 394 243 79 13 chr5 180561182 180561334 -22524198 - L1ME3A LINE L1 -227 5943 5782 753 205 110 9 chr5 180561377 180561632 -22523900 - L1MA4 LINE L1 0 6291 6030 664 286 117 70 chr5 180562020 180563055 -22522477 - L1MEd LINE L1 -4749 1561 455 366 263 143 79 chr5 180564234 180564255 -22521277 - L1ME3A LINE L1 -255 5915 5897 1548 176 50 55 chr5 180564255 180564619 -22520913 + MLT1A1 LTR MaLR 4 365 0 366 263 143 79 chr5 180564619 180564660 -22520872 - L1ME3A LINE L1 -273 5897 5860 2363 136 21 9 chr5 180564660 180564992 -22520540 + MER1B DNA MER1_type 2 337 0 366 263 143 79 chr5 180564992 180565194 -22520338 - L1ME3A LINE L1 -310 5860 5633 1947 122 3 17 chr5 180565357 180565651 -22519881 + AluSx SINE Alu 1 290 -22 338 301 93 49 chr5 180565656 180565762 -22519770 - L1MEd LINE L1 -2413 3716 3616 1268 179 9 201 chr5 180565762 180566214 -22519318 + MLT1A1 LTR MaLR 1 365 0 338 301 93 49 chr5 180566214 180566333 -22519199 - L1MEd LINE L1 -2513 3616 3481 657 190 63 151 chr5 180566386 180566717 -22518815 - L1MC4 LINE L1 -270 7772 7471 385 276 79 16 chr5 180566717 180566844 -22518688 + MIR3 SINE MIR 74 208 0 1195 274 45 17 chr5 180567047 180567401 -22518131 - MLT1K LTR MaLR -94 494 131 582 266 106 2 chr5 180567425 180567735 -22517797 - MLT2E LTR ERVL -15 613 218 465 320 131 6 chr5 180567797 180568123 -22517409 - L2 LINE L2 -181 3091 2725 677 292 136 33 chr5 180568319 180568768 -22516764 - MLT1L LTR MaLR -17 598 104 281 116 0 0 chr5 180568785 180568828 -22516704 - MADE1 DNA Mariner 0 80 38 371 276 121 30 chr5 180568832 180569238 -22516294 - L1MEd LINE L1 -3192 2937 2495 22 0 0 0 chr5 180569387 180569409 -22516123 + AT_rich Low_complexity Low_complexity 1 22 0 30873 106 36 57 chr5 180569412 180575696 -22509836 - L1PA7 LINE L1 -6 6148 12 260 229 90 41 chr5 180576263 180576385 -22509147 - L1MEd LINE L1 -4927 1192 1065 1757 124 8 8 chr5 180576568 180576834 -22508698 + AluSc SINE Alu 39 304 -5 8041 102 54 21 chr5 180577176 180579048 -22506484 - L1PA8 LINE L1 -8 6164 4241 1912 137 3 39 chr5 180579048 180579355 -22506177 - AluSg SINE Alu -14 296 1 8041 102 54 21 chr5 180579355 180579500 -22506032 - L1PA8 LINE L1 -1931 4241 4102 390 241 116 58 chr5 180579774 180579981 -22505551 + MIR SINE MIR 1 219 -43 2247 116 0 0 chr5 180580218 180580519 -22505013 - AluSx SINE Alu -11 301 1 181 299 117 13 chr5 180580631 180580708 -22504824 + L2 LINE L2 3184 3268 -4 182 278 37 83 chr5 180581292 180581400 -22504132 - L2 LINE L2 -225 3047 2945 285 250 0 25 chr5 180581863 180581943 -22503589 - Charlie8 DNA MER1_type 0 2417 2340 361 268 65 30 chr5 180581949 180582117 -22503415 - Charlie8 DNA MER1_type -2152 265 92 341 302 55 50 chr5 180582524 180582706 -22502826 + MIR SINE MIR 79 261 -1 44537 41 8 3 chr5 180583634 180589755 -22495777 + L1PA3 LINE L1 4 6155 0 199 298 161 24 chr5 180589775 180589899 -22495633 - MIR3 SINE MIR -49 159 19 192 152 0 0 chr5 180590335 180590368 -22495164 + (CTA)n Simple_repeat Simple_repeat 1 33 0 594 223 0 0 chr5 180590421 180590524 -22495008 + MER6B DNA MER2_type 1 103 -173 276 262 0 0 chr5 180590504 180590565 -22494967 + MER6B DNA MER2_type 146 206 -4 * 697 231 26 13 chr5 180590566 180590722 -22494810 + MIR SINE MIR 4 161 -101 196 214 18 89 chr5 180591015 180591071 -22494461 - MIR SINE MIR -104 104 53 236 299 0 0 chr5 180591088 180591155 -22494377 - MIR SINE MIR -84 124 58 233 300 40 30 chr5 180591422 180591522 -22494010 - MIR SINE MIR -109 153 53 317 200 17 0 chr5 180591611 180591671 -22493861 + MER58 DNA MER1_type 2360 2420 0 220 303 83 28 chr5 180591671 180591780 -22493752 + L2 LINE L2 3196 3310 -3 503 254 186 17 chr5 180593359 180593536 -22491996 - MIR SINE MIR -48 214 8 216 277 113 47 chr5 180593598 180593705 -22491827 - MIR SINE MIR -97 111 3 276 259 99 0 chr5 180594151 180594232 -22491300 - L2 LINE L2 0 3272 3184 210 258 45 56 chr5 180594274 180594363 -22491169 - L3 LINE CR1 -143 1434 1347 345 214 64 100 chr5 180594468 180594572 -22490960 + MIR SINE MIR 110 209 -53 1067 98 262 6 chr5 180594572 180594755 -22490777 - MER30 DNA MER1_type 0 230 1 345 214 64 100 chr5 180594755 180594790 -22490742 + MIR SINE MIR 209 244 -18 302 235 25 62 chr5 180595443 180595524 -22490008 - L2 LINE L2 -7 3265 3188 216 67 0 0 chr5 180595910 180595940 -22489592 + (CA)n Simple_repeat Simple_repeat 2 31 0 464 188 24 0 chr5 180595960 180596000 -22489532 + MER3 DNA MER1_type 6 47 -162 261 163 0 125 chr5 180596000 180596080 -22489452 - MER3 DNA MER1_type 0 209 140 609 207 86 71 chr5 180596136 180596334 -22489198 - MER58C DNA MER1_type -14 201 1 23 54 0 0 chr5 180596408 180596445 -22489087 + AT_rich Low_complexity Low_complexity 1 37 0 299 316 63 0 chr5 180596988 180597083 -22488449 - L2 LINE L2 -33 3239 3139 187 305 66 89 chr5 180597132 180597355 -22488177 - L2 LINE L2 -256 3016 2791 360 294 42 58 chr5 180598655 180598816 -22486716 - MIR SINE MIR -62 146 38 661 227 163 51 chr5 180598975 180599137 -22486395 - MER113 DNA MER1_type? -85 436 294 7535 57 0 2 chr5 180599137 180600307 -22485225 - L1PA6 LINE L1 -4 6150 4984 661 227 163 51 chr5 180600307 180600536 -22484996 - MER113 DNA MER1_type? -227 294 1 2233 118 3 0 chr5 180600587 180600883 -22484649 - AluSx SINE Alu -15 297 1 1780 198 73 90 chr5 180601238 180601784 -22483748 + MLT1F LTR MaLR 1 537 -5 186 282 59 0 chr5 180601805 180601890 -22483642 - MIR SINE MIR -49 213 124 208 298 35 0 chr5 180602037 180602094 -22483438 - MIR3 SINE MIR -36 172 114 303 310 0 60 chr5 180603562 180603678 -22481854 + MIR3 SINE MIR 49 157 -51 237 208 38 19 chr5 180603771 180603824 -22481708 + L3 LINE CR1 1518 1571 -6 450 336 106 37 chr5 180604233 180604853 -22480679 - L2 LINE L2 -47 3225 2550 432 291 43 14 chr5 180606634 180606775 -22478757 + L2 LINE L2 3164 3308 -5 254 379 144 0 chr5 180607900 180608053 -22477479 - L2 LINE L2 -1 3271 3097 591 271 80 15 chr5 180608092 180608291 -22477241 - MIR SINE MIR -43 219 8 524 268 6 55 chr5 180608560 180608724 -22476808 - Charlie8 DNA MER1_type -2152 265 110 229 270 60 40 chr5 180609438 180609538 -22475994 + MER5A DNA MER1_type 3 104 -85 342 280 67 40 chr5 180611057 180611207 -22474325 + MIR3 SINE MIR 4 157 -51 418 245 68 27 chr5 180611263 180611410 -22474122 + MER103 DNA DNA 4 156 -10 619 311 53 13 chr5 180612392 180612617 -22472915 - MIR SINE MIR -11 251 18 517 227 91 40 chr5 180613150 180613326 -22472206 + MIR SINE MIR 63 247 -15 337 296 33 37 chr5 180613401 180613547 -22471985 - MIR3 SINE MIR -68 140 3 368 236 67 135 chr5 180614511 180614719 -22470813 - MER102b DNA MER1_type -11 330 137 357 340 19 9 chr5 180615953 180616059 -22469473 - MIR SINE MIR -82 126 20 471 252 76 86 chr5 180616228 180616438 -22469094 - MIR SINE MIR -44 218 11 356 304 61 20 chr5 180616685 180616833 -22468699 - MIR3 SINE MIR -25 183 30 285 203 220 34 chr5 180616908 180617026 -22468506 + L2 LINE L2 3168 3307 -6 470 295 91 38 chr5 180617591 180617801 -22467731 - MIR SINE MIR -35 227 7 562 238 166 7 chr5 180617805 180617956 -22467576 - MER5A DNA MER1_type -6 183 9 390 341 71 77 chr5 180618180 180618646 -22466886 + L2 LINE L2 2804 3266 -6 364 313 53 8 chr5 180620649 180620780 -22464752 + MER5B DNA MER1_type 5 141 -37 311 338 81 6 chr5 180620894 180621054 -22464478 - MIR SINE MIR -73 189 18 397 281 44 37 chr5 180621140 180621275 -22464257 - MIR3 SINE MIR -66 142 7 760 290 69 50 chr5 180622721 180623200 -22462332 - Charlie8 DNA MER1_type -1901 516 29 198 0 0 0 chr5 180623827 180623849 -22461683 + (T)n Simple_repeat Simple_repeat 1 22 0 6661 60 27 0 chr5 180624097 180624914 -22460618 + L1PA7 LINE L1 5315 6153 -1 809 282 116 17 chr5 180626176 180626764 -22458768 - L2 LINE L2 -3 3310 2653 201 121 0 0 chr5 180627652 180627685 -22457847 + (TG)n Simple_repeat Simple_repeat 2 34 0 1051 171 0 9 chr5 180627926 180628570 -22456962 + (TCCA)n Simple_repeat Simple_repeat 1 818 0 182 220 102 17 chr5 180628766 180628825 -22456707 + MIR SINE MIR 119 182 -80 269 305 84 0 chr5 180628853 180628948 -22456584 + MIR SINE MIR 109 211 -51 1291 236 57 34 chr5 180630479 180630860 -22454672 + MLT1D LTR MaLR 1 390 -115 2517 124 13 26 chr5 180630860 180631240 -22454292 - MER1A DNA MER1_type 0 529 155 587 205 34 0 chr5 180631276 180631393 -22454139 + MLT1D LTR MaLR 385 505 0 211 160 0 80 chr5 180631563 180631613 -22453919 - MIR SINE MIR -99 163 118 686 246 43 59 chr5 180632037 180632224 -22453308 + MER91B DNA MER1_type 2 185 -5 511 282 158 4 chr5 180632239 180632498 -22453034 - L2 LINE L2 -104 3209 2911 298 342 26 20 chr5 180632678 180632830 -22452702 - MIR3 SINE MIR -48 160 8 343 291 111 73 chr5 180633289 180633523 -22452009 + MIR SINE MIR 3 245 -17 1018 162 71 0 chr5 180633663 180633861 -22451671 + MER20 DNA MER1_type 6 217 -2 531 279 25 6 chr5 180634855 180635013 -22450519 - MIR SINE MIR 0 262 102 1707 100 12 4 chr5 180635775 180636045 -22449487 + MER41B LTR ERV1 166 480 -155 2362 87 0 3 chr5 180636045 180636344 -22449188 + AluSg SINE Alu 1 298 -12 1707 100 12 4 chr5 180636344 180636415 -22449117 + MER41B LTR ERV1 480 549 -86 572 266 206 5 chr5 180636986 180637185 -22448347 - MIR SINE MIR -15 247 9 254 336 107 8 chr5 180637264 180637386 -22448146 - MIR SINE MIR -97 165 32 611 215 98 19 chr5 180637460 180637803 -22447729 - MER113 DNA MER1_type? -117 404 8 991 154 70 106 chr5 180638074 180638301 -22447231 - MER20 DNA MER1_type 0 219 1 1466 99 90 0 chr5 180639436 180639647 -22445885 - MER30 DNA MER1_type 0 230 1 838 265 49 20 chr5 180639805 180640050 -22445482 - MIR SINE MIR -6 256 5 929 182 45 30 chr5 180640739 180640937 -22444595 + MER3 DNA MER1_type 9 209 0 2174 86 46 0 chr5 180641046 180641326 -22444206 + AluSx SINE Alu 1 293 -19 354 169 0 0 chr5 180641329 180641394 -22444138 + (TA)n Simple_repeat Simple_repeat 2 66 0 257 258 0 62 chr5 180641394 180641491 -22444041 - L1MC4 LINE L1 -1339 6703 6613 4524 100 14 3 chr5 180641518 180642140 -22443392 + PABL_A LTR ERV1 32 660 0 460 318 59 13 chr5 180642245 180642481 -22443051 - MIR SINE MIR -3 259 13 210 170 3 21 chr5 180642636 180642683 -22442849 + MIR SINE MIR 105 151 -62 1130 138 6 0 chr5 180643642 180643848 -22441684 - AluJ SINE Alu 0 328 122 644 99 65 3 chr5 180643860 180644158 -22441374 + (TA)n Simple_repeat Simple_repeat 1 316 0 302 253 46 23 chr5 180644158 180644245 -22441287 - L1MC4 LINE L1 -1338 6704 6616 327 165 22 11 chr5 180644246 180644337 -22441195 + (TA)n Simple_repeat Simple_repeat 1 92 0 704 166 9 21 chr5 180644490 180644732 -22440800 + (CATA)n Simple_repeat Simple_repeat 1 238 0 225 129 35 106 chr5 180644734 180644819 -22440713 + L1MC3 LINE L1 6569 6647 -1138 344 256 22 0 chr5 180644845 180644935 -22440597 - L1MC4 LINE L1 -1339 6703 6612 313 272 0 22 chr5 180644860 180644952 -22440580 + L1MC4 LINE L1 6614 6703 -1339 * 597 149 49 10 chr5 180644952 180645242 -22440290 + (TA)n Simple_repeat Simple_repeat 1 301 0 800 169 0 8 chr5 180645262 180645392 -22440140 - AluJ SINE Alu -183 129 1 193 196 0 22 chr5 180645657 180645703 -22439829 - MIR SINE MIR -7 255 211 213 121 0 0 chr5 180645818 180645851 -22439681 + (CAT)n Simple_repeat Simple_repeat 3 35 0 691 313 24 28 chr5 180645886 180646135 -22439397 - MIR SINE MIR -9 253 6 26 64 0 0 chr5 180646382 180646429 -22439103 + AT_rich Low_complexity Low_complexity 1 47 0 402 246 0 87 chr5 180648877 180649003 -22436529 + L2 LINE L2 3155 3269 -3 252 224 17 0 chr5 180649287 180649345 -22436187 + L2 LINE L2 3214 3272 0 409 282 113 60 chr5 180649683 180650080 -22435452 + MLT1K LTR MaLR 168 585 -3 2281 107 0 3 chr5 180650312 180650620 -22434912 + AluSg SINE Alu 1 307 -3 272 293 50 36 chr5 180651026 180651166 -22434366 + MIR SINE MIR 48 189 -73 330 267 160 20 chr5 180651270 180651420 -22434112 + L1MC4a LINE L1 6562 6732 -1076 2061 217 106 84 chr5 180651428 180652033 -22433499 + L1MC5 LINE L1 6834 7473 -488 2351 102 3 0 chr5 180652033 180652337 -22433195 + AluSp SINE Alu 1 305 -8 2061 217 106 84 chr5 180652337 180652776 -22432756 + L1MC5 LINE L1 7473 7901 -60 12321 30 9 0 chr5 180652779 180654926 -22430606 + L1PA4 LINE L1 3993 6151 -4 419 230 169 39 chr5 180654965 180655143 -22430389 + MIR SINE MIR 45 245 -17 578 216 183 26 chr5 180655683 180655836 -22429696 - MER5A DNA MER1_type 0 189 13 506 223 9 0 chr5 180656586 180656698 -22428834 + MER103 DNA DNA 9 121 -45 326 261 134 0 chr5 180657112 180657231 -22428301 + MIR SINE MIR 102 236 -26 209 326 34 79 chr5 180657317 180657495 -22428037 + MER5A DNA MER1_type 5 174 -15 2404 61 0 0 chr5 180658064 180658382 -22427150 + AluY SINE Alu 1 318 0 796 208 45 0 chr5 180658388 180658566 -22426966 + MIR SINE MIR 29 214 -48 1946 134 17 7 chr5 180659075 180659374 -22426158 + AluSx SINE Alu 1 302 -10 272 184 0 0 chr5 180659376 180659425 -22426107 - MER112 DNA MER1_type -98 162 114 224 204 0 0 chr5 180659464 180659508 -22426024 + (TG)n Simple_repeat Simple_repeat 2 45 0 270 318 54 16 chr5 180659847 180659976 -22425556 - MIR SINE MIR -12 250 117 797 281 23 12 chr5 180660371 180660627 -22424905 - MIR SINE MIR -2 260 2 275 94 12 235 chr5 180660682 180660736 -22424796 + Alu SINE Alu 240 247 -55 1838 137 48 14 chr5 180660736 180661029 -22424503 - AluSq SINE Alu -8 305 3 275 94 12 235 chr5 180661029 180661059 -22424473 + Alu SINE Alu 247 282 -20 479 250 109 0 chr5 180661341 180661469 -22424063 + MIR SINE MIR 70 211 -51 2576 75 0 0 chr5 180662012 180662320 -22423212 + AluSg SINE Alu 1 308 -2 418 324 139 14 chr5 180662813 180663029 -22422503 - MIR SINE MIR -17 245 3 568 298 133 42 chr5 180663038 180663097 -22422435 - L3 LINE CR1 -108 1469 1417 2360 104 0 0 chr5 180663097 180663404 -22422128 - AluSx SINE Alu -5 307 1 568 298 133 42 chr5 180663404 180663744 -22421788 - L3 LINE CR1 -160 1417 1034 2022 94 10 45 chr5 180664408 180664716 -22420816 - L1MA2 LINE L1 0 6304 6008 182 262 0 0 chr5 180666865 180666907 -22418625 + MIR SINE MIR 50 91 -171 370 155 42 0 chr5 180667969 180668040 -22417492 - MIR SINE MIR -108 154 81 251 200 106 47 chr5 180668800 180668885 -22416647 - MIR SINE MIR -6 256 167 1854 120 12 0 chr5 180669505 180669763 -22415769 + AluSx SINE Alu 1 261 -51 204 40 0 0 chr5 180669764 180669789 -22415743 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 434 311 47 5 chr5 180669799 180669992 -22415540 - MIR SINE MIR -15 247 47 291 282 115 40 chr5 180670085 180670259 -22415273 - MIR SINE MIR -41 221 35 21 36 0 0 chr5 180670443 180670471 -22415061 + AT_rich Low_complexity Low_complexity 1 28 0 231 308 18 122 chr5 180670579 180670800 -22414732 + L2 LINE L2 2977 3174 -98 622 311 109 29 chr5 180671829 180672314 -22413218 + MLT1L LTR MaLR 90 613 -2 274 243 29 0 chr5 180672314 180672384 -22413148 + MER103 DNA DNA 30 101 -65 412 284 43 0 chr5 180672436 180672577 -22412955 - MIR3 SINE MIR -48 160 14 443 228 89 0 chr5 180672631 180672732 -22412800 + FLAM_A SINE Alu 1 110 -32 601 236 18 89 chr5 180672889 180673114 -22412418 + Charlie8 DNA MER1_type 57 265 -2152 256 297 22 11 chr5 180673291 180673382 -22412150 + MER103 DNA DNA 3 94 -72 2605 54 0 6 chr5 180673885 180674198 -22411334 + AluY SINE Alu 1 311 0 535 306 100 13 chr5 180675371 180675600 -22409932 - MIR SINE MIR -12 250 2 215 254 0 32 chr5 180676293 180676356 -22409176 + CT-rich Low_complexity Low_complexity 1 61 0 1147 208 14 0 chr5 180676878 180677094 -22408438 - MER20 DNA MER1_type 0 219 1 1361 113 5 5 chr5 180677563 180677758 -22407774 - L1PB1 LINE L1 -1 6150 5956 316 344 138 26 chr5 180677792 180677981 -22407551 + MIR SINE MIR 41 250 -12 185 273 18 0 chr5 180678110 180678165 -22407367 + L2 LINE L2 2916 2971 -343 327 304 37 44 chr5 180678357 180678492 -22407040 + L2 LINE L2 3180 3313 0 1782 166 0 3 chr5 180678609 180678898 -22406634 + AluSx SINE Alu 1 288 -24 781 97 62 0 chr5 180679331 180679444 -22406088 + LTR26B LTR ERV1 73 192 -339 231 284 9 73 chr5 180679670 180679779 -22405753 + MIR SINE MIR 99 200 -62 12275 79 1 3 chr5 180680132 180682499 -22403033 + L1PA7 LINE L1 3766 6154 0 742 169 39 13 chr5 180683350 180683504 -22402028 + L1MC4 LINE L1 7218 7375 -667 3285 146 100 5 chr5 180683511 180684079 -22401453 + LTR26E LTR ERV1 1 622 0 1289 251 134 14 chr5 180684081 180684520 -22401012 + L1MC4 LINE L1 7381 7872 -170 477 0 0 0 chr5 180684531 180684584 -22400948 + (CA)n Simple_repeat Simple_repeat 2 54 0 344 298 124 36 chr5 180684591 180684743 -22400789 - L2 LINE L2 -217 3055 2875 2082 143 59 12 chr5 180684743 180685065 -22400467 - MER1B DNA MER1_type 0 337 1 344 298 124 36 chr5 180685065 180685137 -22400395 - L2 LINE L2 -397 2875 2811 202 229 0 21 chr5 180685838 180685886 -22399646 - L2 LINE L2 0 3313 3267 2369 148 108 32 chr5 180686002 180686476 -22399056 - LTR54 LTR ERV1 0 510 1 374 106 0 15 chr5 180686594 180686660 -22398872 + (TG)n Simple_repeat Simple_repeat 2 66 0 244 310 26 0 chr5 180687119 180687232 -22398300 + MER113 DNA MER1_type? 1 116 -405 2026 112 10 14 chr5 180687241 180687537 -22397995 - AluSx SINE Alu -17 295 1 440 350 122 12 chr5 180689176 180689505 -22396027 + L2 LINE L2 2232 2596 -718 22 0 0 0 chr5 180689531 180689553 -22395979 + AT_rich Low_complexity Low_complexity 1 22 0 348 274 21 11 chr5 180690051 180690146 -22395386 + MER5A DNA MER1_type 72 167 -22 287 311 16 25 chr5 180690058 180690180 -22395352 - MER5A DNA MER1_type -68 121 1 * 24 0 0 0 chr5 180691020 180691044 -22394488 + AT_rich Low_complexity Low_complexity 1 24 0 614 241 83 7 chr5 180691383 180691528 -22394004 + MIR3 SINE MIR 38 193 -15 664 293 102 33 chr5 180691910 180692340 -22393192 + L2 LINE L2 2285 2744 -570 231 164 14 27 chr5 180692911 180692984 -22392548 + GA-rich Low_complexity Low_complexity 3 74 0 274 71 24 24 chr5 180693042 180693084 -22392448 + MER4A LTR ERV1 54 95 -569 1815 137 3 62 chr5 180693086 180693452 -22392080 + MER4A LTR ERV1 261 663 -1 329 276 104 18 chr5 180693510 180693673 -22391859 - MIR SINE MIR -78 184 8 582 243 97 44 chr5 180693747 180693953 -22391579 + MER77 LTR ERV1 54 270 -335 3514 110 33 39 chr5 180693965 180694537 -22390995 + LTR34 LTR ERV1 3 571 -128 828 201 7 0 chr5 180694704 180694848 -22390684 + LTR34 LTR ERV1 554 698 -1 1161 261 37 12 chr5 180694851 180695173 -22390359 + MER77 LTR ERV1 276 605 0 419 318 5 46 chr5 180695427 180695622 -22389910 + MIR3 SINE MIR 20 206 -2 210 366 0 36 chr5 180695842 180695954 -22389578 - L2 LINE L2 -22 3250 3143 309 352 96 5 chr5 180696562 180696761 -22388771 - MIR SINE MIR -29 233 17 288 307 0 0 chr5 180696813 180696888 -22388644 - MIR SINE MIR -114 148 74 1266 247 79 31 chr5 180697991 180698781 -22386751 + L1ME LINE L1 441 1285 -5087 * 2652 166 8 2 chr5 180698771 180699300 -22386232 - L1 LINE L1 -1008 5138 4607 747 192 13 20 chr5 180699300 180699451 -22386081 - FRAM SINE Alu -13 163 14 1234 174 11 0 chr5 180699452 180699727 -22385805 - L1 LINE L1 -1534 4612 4335 370 282 77 28 chr5 180699733 180700028 -22385504 + L1ME LINE L1 1185 1648 -4915 202 229 57 14 chr5 180700035 180700105 -22385427 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 228 93 0 37 chr5 180700109 180700163 -22385369 - L1MC4 LINE L1 -1339 6703 6652 760 260 48 93 chr5 180700185 180700280 -22385252 + L1ME LINE L1 1706 1804 -4759 2260 108 0 13 chr5 180700280 180700585 -22384947 + AluSc SINE Alu 1 301 -8 760 260 48 93 chr5 180700585 180701303 -22384229 + L1ME LINE L1 1804 2482 -4081 10297 169 35 9 chr5 180701347 180702938 -22382594 + L1M1 LINE L1 3289 4966 -2599 2290 89 7 0 chr5 180702938 180703229 -22382303 + AluSg SINE Alu 1 293 -17 10297 169 35 9 chr5 180703229 180704146 -22381386 + L1M1 LINE L1 4966 5858 -1707 4067 249 111 16 chr5 180704158 180706079 -22379453 + L1ME LINE L1 2602 4706 -1676 255 195 62 97 chr5 180706401 180706514 -22379018 + L1MC4a LINE L1 7049 7157 -651 586 294 98 8 chr5 180706766 180707011 -22378521 - L3 LINE CR1 -115 1462 1196 186 340 19 0 chr5 180707797 180707850 -22377682 + MIR SINE MIR 19 72 -136 334 260 136 45 chr5 180708285 180708439 -22377093 - MIR SINE MIR -10 252 85 198 333 39 13 chr5 180708426 180708504 -22377028 + MIR SINE MIR 48 127 -81 * 724 321 12 29 chr5 180709424 180709667 -22375865 - MIR SINE MIR -16 246 8 22 35 0 0 chr5 180709740 180709769 -22375763 + AT_rich Low_complexity Low_complexity 1 29 0 1013 200 0 45 chr5 180710173 180710393 -22375139 + MER20 DNA MER1_type 7 216 -3 385 225 291 28 chr5 180711333 180711515 -22374017 + MIR SINE MIR 8 237 -25 311 227 13 13 chr5 180712061 180712136 -22373396 + MIR SINE MIR 39 113 -149 283 282 35 0 chr5 180712136 180712221 -22373311 - MIR SINE MIR -82 126 39 450 292 0 19 chr5 180712221 180712375 -22373157 + Charlie8 DNA MER1_type 1 151 -2266 2249 130 0 0 chr5 180712777 180713085 -22372447 - AluSx SINE Alu -4 308 1 432 265 130 16 chr5 180713119 180713304 -22372228 - MIR SINE MIR -6 256 51 625 208 75 133 chr5 180713317 180713664 -22371868 + MER102a DNA MER1_type 1 327 -3 1590 206 89 9 chr5 180713757 180714185 -22371347 + MLT1C LTR MaLR 6 467 0 26 0 0 0 chr5 180715231 180715257 -22370275 + AT_rich Low_complexity Low_complexity 1 26 0 395 338 103 0 chr5 180715281 180715485 -22370047 - MIR SINE MIR -18 244 20 226 277 88 88 chr5 180715890 180716038 -22369494 - MIR SINE MIR -70 192 45 236 332 139 59 chr5 180716754 180717578 -22367954 + L2 LINE L2 2370 3261 -11 29 28 0 0 chr5 180718280 180718316 -22367216 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr5 180718707 180718738 -22366794 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr5 180719277 180719311 -22366221 + AT_rich Low_complexity Low_complexity 1 34 0 1495 152 28 50 chr5 180719316 180719589 -22365943 - Tigger1 DNA MER2_type -1 2417 2151 1868 143 45 0 chr5 180719589 180719876 -22365656 - AluSq SINE Alu -13 300 1 1495 152 28 50 chr5 180719876 180719924 -22365608 - Tigger1 DNA MER2_type -267 2151 2103 1091 172 0 0 chr5 180719912 180720098 -22365434 - Tigger1 DNA MER2_type -922 1496 1311 * 654 196 54 0 chr5 180720112 180720224 -22365308 - AluJo/FRAM SINE Alu -30 282 165 1220 193 41 37 chr5 180720224 180720468 -22365064 - AluJo SINE Alu -67 245 1 7724 125 7 53 chr5 180720472 180721026 -22364506 - Tigger1 DNA MER2_type -1098 1320 742 2392 92 7 0 chr5 180721026 180721329 -22364203 - AluY SINE Alu -6 305 1 1269 169 0 136 chr5 180721335 180721673 -22363859 - AluJb SINE Alu -20 292 1 7724 125 7 53 chr5 180721673 180722495 -22363037 - Tigger1 DNA MER2_type -1681 737 1 22 80 0 0 chr5 180722497 180722547 -22362985 + AT_rich Low_complexity Low_complexity 1 50 0 806 142 96 35 chr5 180722729 180722926 -22362606 - L1MD3 LINE L1 -5 7990 7782 2118 110 0 3 chr5 180723045 180723362 -22362170 - AluSx SINE Alu 0 312 1 471 349 79 24 chr5 180725005 180725383 -22360149 + L1ME LINE L1 4759 5157 -989 341 305 22 35 chr5 180725477 180725703 -22359829 + L1ME LINE L1 5310 5532 -589 41089 32 21 1 chr5 180725720 180731751 -22353781 - L1HS LINE L1 0 6155 3 2052 125 0 0 chr5 180731800 180732120 -22353412 - AluSg1 SINE Alu 0 320 1 360 256 79 15 chr5 180732143 180732352 -22353180 + L1ME LINE L1 5598 5818 -344 913 202 37 49 chr5 180732392 180732635 -22352897 - MIR SINE MIR -15 247 8 558 252 62 80 chr5 180732728 180733002 -22352530 - MLT1J LTR MaLR -9 502 234 684 347 12 4 chr5 180733674 180733922 -22351610 - MIR SINE MIR -11 251 2 2483 150 13 33 chr5 180734531 180734983 -22350549 - MSTB2 LTR MaLR 0 457 15 200 263 100 38 chr5 180734987 180735067 -22350465 + L2 LINE L2 3146 3230 -42 488 70 0 105 chr5 180735181 180735230 -22350302 - MADE1 DNA Mariner 0 80 42 2421 62 0 0 chr5 180735230 180735518 -22350014 + AluY SINE Alu 1 288 -23 488 70 0 105 chr5 180735518 180735554 -22349978 - MADE1 DNA Mariner -38 42 4 193 280 93 47 chr5 180735558 180735665 -22349867 + L2 LINE L2 3160 3271 -1 397 283 141 11 chr5 180735816 180736007 -22349525 - MIR SINE MIR 0 262 47 646 243 129 15 chr5 180738018 180738220 -22347312 + MIR SINE MIR 33 257 -5 533 318 40 5 chr5 180739310 180739511 -22346021 - L2 LINE L2 -8 3305 3098 531 230 43 14 chr5 180739530 180739669 -22345863 - MIR SINE MIR -27 235 93 358 227 92 134 chr5 180739679 180739917 -22345615 + L2 LINE L2 2413 2640 -674 2703 100 27 2 chr5 180739936 180740347 -22345185 + L1PA13 LINE L1 5687 6107 -56 858 241 0 0 chr5 180740367 180740533 -22344999 - FRAM SINE Alu 0 166 1 290 250 60 0 chr5 180740536 180740620 -22344912 + L2 LINE L2 2694 2782 -532 418 323 132 20 chr5 180740698 180740949 -22344583 + L2 LINE L2 2805 3083 -230 1220 317 67 11 chr5 180840950 180841411 -22244121 - L2 LINE L2 -591 2723 2237 2279 107 0 0 chr5 180841528 180841819 -22243713 - AluSg SINE Alu -19 291 1 350 139 0 165 chr5 180841878 180841993 -22243539 - L1MA8 LINE L1 -5 6286 6191 1125 316 60 22 chr5 180841993 180842490 -22243042 - L2 LINE L2 -1093 2221 1706 2287 113 0 0 chr5 180842510 180842820 -22242712 + AluSg SINE Alu 1 310 0 428 138 31 0 chr5 180842820 180842885 -22242647 + AluSc SINE Alu 128 194 -115 326 91 18 0 chr5 180842974 180843029 -22242503 + (GA)n Simple_repeat Simple_repeat 1 56 0 582 15 0 0 chr5 180843029 180843096 -22242436 + (TG)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr5 180843659 180843681 -22241851 + AT_rich Low_complexity Low_complexity 1 22 0 4032 144 5 2 chr5 180843684 180844317 -22241215 + MER41B LTR ERV1 1 635 0 1228 173 34 0 chr5 180844945 180845153 -22240379 - AluJb SINE Alu -13 299 85 586 307 26 10 chr5 180845969 180846161 -22239371 + MIR3 SINE MIR 1 195 -13 2133 134 0 0 chr5 180846322 180846620 -22238912 + AluSx SINE Alu 1 298 -14 626 180 62 25 chr5 180846620 180846729 -22238803 + L1MB4 LINE L1 6014 6117 -63 6053 129 60 56 chr5 180846729 180846939 -22238593 + Tigger3b DNA MER2_type 1 209 -2819 2129 134 7 7 chr5 180846939 180847246 -22238286 + AluSx SINE Alu 1 307 -5 6053 129 60 56 chr5 180847246 180847642 -22237890 + Tigger3b DNA MER2_type 209 602 -2426 1409 175 9 114 chr5 180847642 180847985 -22237547 + AluJo SINE Alu 1 307 -5 6053 129 60 56 chr5 180847985 180848604 -22236928 + Tigger3b DNA MER2_type 602 1231 0 626 180 62 25 chr5 180848604 180848655 -22236877 + L1MB4 LINE L1 6117 6180 0 239 250 56 0 chr5 180848726 180848798 -22236734 - MER103 DNA DNA -76 90 15 2548 72 0 0 chr5 180849591 180849896 -22235636 + AluSg SINE Alu 1 305 -5 1922 112 54 0 chr5 180850841 180851118 -22234414 - AluSq SINE Alu -21 292 1 204 40 0 0 chr5 180852907 180852932 -22232600 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 566 255 73 25 chr5 180853763 180853967 -22231565 + MIR SINE MIR 49 262 0 21 0 0 0 chr5 180854402 180854423 -22231109 + AT_rich Low_complexity Low_complexity 1 21 0 1018 214 0 0 chr5 180854423 180854582 -22230950 - FAM SINE Alu -16 159 1 1154 179 270 3 chr5 180854746 180855042 -22230490 + THE1C LTR MaLR 1 375 0 2337 90 0 37 chr5 180855609 180855930 -22229602 + AluSc SINE Alu 1 309 0 1426 213 45 7 chr5 180856626 180856913 -22228619 - AluJo SINE Alu -14 298 1 1872 139 0 7 chr5 180856989 180857291 -22228241 - AluSx SINE Alu 0 312 13 201 363 0 29 chr5 180858119 180858221 -22227311 - MIR SINE MIR -54 208 110 520 300 27 13 chr5 180858714 180858864 -22226668 + MER115 DNA AcHobo 133 284 -409 387 241 88 50 chr5 180858936 180858973 -22226559 - L1MC5 LINE L1 -1071 6737 6703 1582 180 33 20 chr5 180858973 180859273 -22226259 - AluJb SINE Alu -8 304 1 387 241 88 50 chr5 180859273 180859620 -22225912 - L1MC5 LINE L1 -1105 6703 6351 23 33 0 0 chr5 180859742 180859772 -22225760 + AT_rich Low_complexity Low_complexity 1 30 0 1549 186 41 7 chr5 180859859 180860150 -22225382 + AluJb SINE Alu 1 301 -11 2005 261 99 47 chr5 180860152 180860315 -22225217 + L1MEc LINE L1 1116 1269 -4946 2465 77 0 0 chr5 180860315 180860615 -22224917 - AluY SINE Alu -11 300 1 2005 261 99 47 chr5 180860615 180861304 -22224228 + L1MEc LINE L1 1269 1920 -4295 1995 158 3 3 chr5 180861304 180861615 -22223917 + AluJb SINE Alu 1 311 -1 2005 261 99 47 chr5 180861615 180862264 -22223268 + L1MEc LINE L1 1920 2652 -3563 376 286 51 57 chr5 180862262 180862437 -22223095 - L1ME3 LINE L1 -10 6152 5979 * 529 231 77 0 chr5 180862742 180862888 -22222644 + FLAM_A SINE Alu 5 158 0 1719 137 0 67 chr5 180863176 180863306 -22222226 + AluJo SINE Alu 6 143 -166 2303 113 3 0 chr5 180863306 180863615 -22221917 + AluSx SINE Alu 1 310 -2 1719 137 0 67 chr5 180863615 180863808 -22221724 + AluJo SINE Alu 143 309 0 1109 190 9 9 chr5 180863884 180864100 -22221432 + AluJo SINE Alu 49 264 -48 980 179 183 8 chr5 180864112 180864375 -22221157 + L1MD3 LINE L1 7677 7985 -10 210 91 0 0 chr5 180864869 180864902 -22220630 + (GAA)n Simple_repeat Simple_repeat 2 34 0 1364 167 0 5 chr5 180865125 180865347 -22220185 + AluJo SINE Alu 86 306 -6 560 146 0 0 chr5 180865361 180865443 -22220089 - AluSg/x SINE Alu -14 296 215 2040 103 7 7 chr5 180865543 180865816 -22219716 - AluSx SINE Alu -39 273 1 259 290 29 0 chr5 180866246 180866315 -22219217 - MIR SINE MIR -6 256 186 214 341 91 34 chr5 180867515 180867691 -22217841 + MER5A DNA MER1_type 4 189 0 3487 154 13 9 chr5 180867803 180868328 -22217204 - MER1A DNA MER1_type 0 527 1 347 137 0 0 chr5 180868375 180868426 -22217106 + AluSx SINE Alu 1 51 -250 2037 100 0 0 chr5 180868602 180868862 -22216670 + AluSx SINE Alu 42 301 -11 2110 106 20 7 chr5 180868910 180869212 -22216320 + AluSg SINE Alu 1 306 -4 819 280 104 57 chr5 180869768 180870448 -22215084 + L2 LINE L2 2374 3096 -217 1480 170 118 66 chr5 180870448 180870795 -22214737 - MLT1A1 LTR MaLR 0 365 1 819 280 104 57 chr5 180870795 180870810 -22214722 + L2 LINE L2 3096 3109 -204 205 265 0 41 chr5 180871062 180871111 -22214421 - MER5A DNA MER1_type 0 189 143 2074 158 52 3 chr5 180871227 180871575 -22213957 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr5 180872103 180872131 -22213401 + AT_rich Low_complexity Low_complexity 1 28 0 305 300 122 4 chr5 180872136 180872373 -22213159 - L1ME4a LINE L1 -17 6104 5840 2114 140 0 10 chr5 180872398 180872706 -22212826 - AluSx SINE Alu -7 305 1 2487 215 78 81 chr5 180872847 180873296 -22212236 - MER21B LTR ERV1 -108 755 307 1680 171 24 13 chr5 180873296 180873594 -22211938 + AluJo SINE Alu 1 301 -11 2487 215 78 81 chr5 180873594 180873901 -22211631 - MER21B LTR ERV1 -556 307 1 279 264 58 0 chr5 180873934 180874021 -22211511 - L1ME4a LINE L1 -401 5720 5629 888 181 14 74 chr5 180874038 180874084 -22211448 - MER3 DNA MER1_type -6 203 156 1660 128 12 125 chr5 180874084 180874420 -22211112 - AluJb SINE Alu -4 298 1 2041 115 0 17 chr5 180874430 180874725 -22210807 - AluSq SINE Alu -16 297 8 888 181 14 74 chr5 180874725 180874882 -22210650 - MER3 DNA MER1_type -62 147 2 312 205 98 66 chr5 180875006 180875043 -22210489 - L1ME4a LINE L1 -2344 5464 5430 2371 101 0 0 chr5 180875043 180875340 -22210192 - AluSg SINE Alu -13 297 1 312 205 98 66 chr5 180875340 180875424 -22210108 - L1ME4a LINE L1 -2378 5430 5339 870 220 37 62 chr5 180875788 180876061 -22209471 + L1ME2 LINE L1 5898 6163 -1 1950 144 0 13 chr5 180876136 180876434 -22209098 + AluJb SINE Alu 3 296 -16 592 285 90 5 chr5 180877335 180877535 -22207997 + MIR SINE MIR 31 247 -15 1332 76 0 0 chr5 180878622 180878793 -22206739 - AluSg/x SINE Alu -5 307 137 515 270 86 6 chr5 180879171 180879286 -22206246 - MER5B DNA MER1_type -2 176 43 189 0 0 0 chr5 180879286 180879307 -22206225 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 515 270 86 6 chr5 180879307 180879354 -22206178 - MER5B DNA MER1_type -135 43 1 2118 92 0 27 chr5 180880000 180880345 -22205187 - AluJb SINE Alu 0 337 1 794 99 0 0 chr5 180880359 180880460 -22205072 - HY3 scRNA scRNA 0 101 1 238 306 153 10 chr5 180880512 180880610 -22204922 - L2 LINE L2 0 3313 3202 1511 158 12 85 chr5 180880881 180881209 -22204323 + AluJo SINE Alu 1 304 -8 408 179 0 191 chr5 180881447 180881530 -22204002 + MIR SINE MIR 48 85 -177 774 195 23 0 chr5 180881530 180881658 -22203874 - FLAM_C SINE Alu -2 131 1 408 179 0 191 chr5 180881658 180881742 -22203790 + MIR SINE MIR 85 183 -79 327 233 39 87 chr5 180881835 180881938 -22203594 - L2 LINE L2 -33 3239 3142 1986 122 0 17 chr5 180882582 180882876 -22202656 - AluJb SINE Alu -23 289 1 230 217 43 0 chr5 180882887 180882933 -22202599 + MIR SINE MIR 215 262 0 256 300 0 9 chr5 180882936 180883046 -22202486 + (TTA)n Simple_repeat Simple_repeat 1 109 0 2058 139 3 16 chr5 180883483 180883799 -22201733 + AluSx SINE Alu 1 312 0 251 122 24 0 chr5 180883963 180884004 -22201528 - Charlie5 DNA MER1_type 0 2624 2583 837 238 6 0 chr5 180884004 180884164 -22201368 - FRAM SINE Alu -15 161 1 1497 191 7 23 chr5 180884172 180884476 -22201056 - AluJo SINE Alu -13 299 1 1206 166 61 89 chr5 180884477 180884632 -22200900 - Charlie5 DNA MER1_type -40 2584 2426 2301 92 0 16 chr5 180884632 180884938 -22200594 - AluSx SINE Alu -11 301 1 1206 166 61 89 chr5 180884938 180885143 -22200389 - Charlie5 DNA MER1_type -198 2426 2234 727 197 1 0 chr5 180885140 180885281 -22200251 - Charlie5 DNA MER1_type -2491 121 1 * 204 286 83 12 chr5 180885288 180885372 -22200160 - MIR SINE MIR -5 257 168 * 589 283 187 34 chr5 180885368 180885439 -22200093 + L2 LINE L2 2639 2698 -615 1474 175 64 17 chr5 180885439 180885736 -22199796 + AluJo SINE Alu 1 311 -1 589 283 187 34 chr5 180885736 180885908 -22199624 + L2 LINE L2 2698 2842 -471 2143 93 20 40 chr5 180885908 180886208 -22199324 - AluSx SINE Alu -18 294 1 589 283 187 34 chr5 180886208 180886536 -22198996 + L2 LINE L2 2842 3301 -12 443 239 131 23 chr5 180886554 180886684 -22198848 - MIR SINE MIR -99 163 20 196 229 14 71 chr5 180887280 180887350 -22198182 - MIR SINE MIR -11 251 186 714 245 14 0 chr5 180887571 180887718 -22197814 - MER58A DNA MER1_type 0 149 1 573 354 10 0 chr5 180887719 180887917 -22197615 + MIR SINE MIR 18 217 -45 1088 150 0 0 chr5 180887936 180888096 -22197436 + FRAM SINE Alu 1 159 -17 454 138 0 0 chr5 180888097 180888162 -22197370 - AluJ/FLAM SINE Alu -246 66 2 2072 139 0 0 chr5 180888218 180888512 -22197020 + AluSx SINE Alu 11 304 -8 1320 170 22 0 chr5 180888886 180889110 -22196422 + AluJo SINE Alu 3 231 -81 1155 120 47 11 chr5 180889112 180889303 -22196229 + MSTA LTR MaLR 1 198 -230 738 176 17 8 chr5 180889455 180889574 -22195958 + FLAM_C SINE Alu 2 121 -22 297 103 0 0 chr5 180889587 180889626 -22195906 + MSTA LTR MaLR 390 428 0 * 350 211 0 0 chr5 180889626 180889705 -22195827 + AluJo SINE Alu 229 307 0 258 264 69 56 chr5 180890266 180890410 -22195122 - MIR SINE MIR -52 210 65 1706 191 31 88 chr5 180890449 180890887 -22194645 - Charlie4a DNA MER1_type -1458 503 96 2241 108 0 0 chr5 180890887 180891183 -22194349 + AluSx SINE Alu 1 296 -16 1706 191 31 88 chr5 180891183 180891253 -22194279 - Charlie4a DNA MER1_type -1865 96 24 350 211 92 46 chr5 180891293 180891402 -22194130 - MIR3 SINE MIR -46 162 49 2217 98 10 0 chr5 180891646 180891941 -22193591 - AluSx SINE Alu -14 298 1 1649 172 7 26 chr5 180891943 180892245 -22193287 - AluJo SINE Alu -16 296 1 649 189 28 120 chr5 180892302 180892519 -22193013 + MLT1J LTR MaLR 315 511 0 187 127 159 63 chr5 180892564 180892627 -22192905 + MIR SINE MIR 162 230 -32 2230 119 0 0 chr5 180894393 180894696 -22190836 - AluSx SINE Alu -9 303 1 660 274 52 16 chr5 180894783 180895090 -22190442 + MER113 DNA MER1_type? 4 321 -200 710 206 8 0 chr5 180895090 180895221 -22190311 + FLAM_C SINE Alu 2 133 0 567 232 7 29 chr5 180895250 180895292 -22190240 + MER113 DNA MER1_type? 308 349 -172 2925 171 35 2 chr5 180895292 180895748 -22189784 + MER70A LTR ERVL 2 472 0 567 232 7 29 chr5 180895748 180895843 -22189689 + MER113 DNA MER1_type? 349 442 -79 206 326 105 0 chr5 180895915 180896010 -22189522 - MIR3 SINE MIR -3 205 101 3158 187 47 5 chr5 180896068 180896668 -22188864 - L1MB5 LINE L1 -59 6115 5491 225 329 188 18 chr5 180896763 180897039 -22188493 + L2 LINE L2 2683 3020 -293 830 181 0 8 chr5 180897039 180897172 -22188360 + FLAM_A SINE Alu 2 133 0 225 329 188 18 chr5 180897172 180897221 -22188311 + L2 LINE L2 3020 3059 -254 1971 165 3 0 chr5 180897545 180897848 -22187684 - AluJo SINE Alu -8 304 1 3829 179 70 34 chr5 180897895 180898337 -22187195 + L1ME1 LINE L1 5141 5566 -600 2298 104 0 7 chr5 180898337 180898644 -22186888 - AluSx SINE Alu -6 306 2 3829 179 70 34 chr5 180898644 180899194 -22186338 + L1ME1 LINE L1 5566 6161 -5 1365 159 41 9 chr5 180899219 180899437 -22186095 + L1M3 LINE L1 5271 5499 -684 2308 75 3 10 chr5 180899437 180899769 -22185763 + AluY SINE Alu 5 311 0 1365 159 41 9 chr5 180899769 180899821 -22185711 + L1M3 LINE L1 5499 5548 -635 567 312 98 0 chr5 180900046 180900219 -22185313 + MIR SINE MIR 69 258 -4 475 336 0 14 chr5 180900503 180900646 -22184886 + MIR3 SINE MIR 20 160 -48 428 280 27 32 chr5 180900650 180900836 -22184696 - MER5A DNA MER1_type -4 185 1 248 309 65 32 chr5 180902680 180902803 -22182729 - L2 LINE L2 0 3272 3146 616 310 20 0 chr5 180902813 180903010 -22182522 - MIR SINE MIR -15 247 47 521 301 179 44 chr5 180903381 180904209 -22181323 - L2 LINE L2 0 3313 2374 327 299 25 57 chr5 180904337 180904494 -22181038 + MER5A DNA MER1_type 11 167 -16 457 196 70 35 chr5 180904528 180904642 -22180890 - MIR SINE MIR -27 181 63 205 167 0 0 chr5 180904908 180904944 -22180588 + (TG)n Simple_repeat Simple_repeat 2 37 0 182 170 0 21 chr5 180905091 180905138 -22180394 + GA-rich Low_complexity Low_complexity 1 46 0 686 251 4 72 chr5 180905514 180905749 -22179783 - MIR SINE MIR -2 260 42 698 217 19 0 chr5 180905914 180906071 -22179461 - MER69 DNA AcHobo -319 2207 2048 1310 276 70 27 chr5 180906080 180906591 -22178941 - MER69 DNA AcHobo -1958 568 36 182 281 31 0 chr5 180907175 180907239 -22178293 - MIR SINE MIR -73 189 124 2211 104 0 0 chr5 180907242 180907529 -22178003 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr5 180907530 180907550 -22177982 + (TTAAA)n Simple_repeat Simple_repeat 5 24 0 22 0 0 0 chr5 180907992 180908014 -22177518 + AT_rich Low_complexity Low_complexity 1 22 0 300 53 0 0 chr5 180908014 180908052 -22177480 + (CA)n Simple_repeat Simple_repeat 2 39 0 440 228 24 65 chr5 180908234 180908357 -22177175 - MER94 DNA DNA 0 134 17 1456 182 111 14 chr5 180909698 180910067 -22175465 - Charlie4a DNA MER1_type -19 489 85 21 0 0 0 chr5 180910088 180910109 -22175423 + AT_rich Low_complexity Low_complexity 1 21 0 715 244 90 32 chr5 180910640 180910920 -22174612 - L1MC4a LINE L1 -360 5818 5596 772 113 4 2 chr5 180910985 180911242 -22174290 + AluSx SINE Alu 1 305 -4 232 53 105 0 chr5 180911617 180911693 -22173839 + (TA)n Simple_repeat Simple_repeat 2 85 0 1319 143 0 19 chr5 180911746 180911956 -22173576 + AluJ SINE Alu 2 207 -105 524 188 0 0 chr5 180912056 180912152 -22173380 + AluJ SINE Alu 211 306 -6 1837 185 34 8 chr5 180912451 180912807 -22172725 - MLT1A1 LTR MaLR 0 365 1 1961 157 0 13 chr5 180912988 180913300 -22172232 - AluJo SINE Alu -4 308 1 729 256 231 34 chr5 180913451 180914044 -22171488 - L1MC4a LINE L1 -1729 6079 5370 1737 94 0 51 chr5 180915422 180915678 -22169854 + AluSx SINE Alu 55 297 -15 289 300 25 0 chr5 180915719 180915870 -22169662 + MIR SINE MIR 106 260 -2 2204 118 0 0 chr5 180916396 180916692 -22168840 - AluSx SINE Alu -16 296 1 510 303 46 13 chr5 180916733 180916924 -22168608 + MIR SINE MIR 11 213 -49 1146 149 58 5 chr5 180916924 180917132 -22168400 + MER20 DNA MER1_type 1 219 0 510 303 46 13 chr5 180917132 180917178 -22168354 + MIR SINE MIR 213 256 -6 815 226 16 11 chr5 180917782 180917968 -22167564 + MER5A DNA MER1_type 1 187 -2 293 247 62 0 chr5 180918132 180918213 -22167319 - MIR SINE MIR -94 168 83 2053 109 6 32 chr5 180918280 180918593 -22166939 - AluSg SINE Alu -5 305 1 324 276 153 12 chr5 180918847 180919017 -22166515 + MIR SINE MIR 63 256 -6 284 228 80 15 chr5 180919841 180919971 -22165561 - MIR3 SINE MIR -8 200 63 243 0 0 0 chr5 180920098 180920125 -22165407 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 405 0 0 0 chr5 180920124 180920169 -22165363 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 280 8 8 chr5 180920404 180920536 -22164996 + MIR SINE MIR 56 187 -75 281 267 120 31 chr5 180920565 180920756 -22164776 + L2 LINE L2 2856 3063 -209 2821 142 10 42 chr5 180921014 180921515 -22164017 + MER31A LTR ERV1 1 485 0 285 183 0 0 chr5 180921523 180921583 -22163949 + (CA)n Simple_repeat Simple_repeat 2 61 0 1014 201 50 0 chr5 180921963 180922162 -22163370 - MER3 DNA MER1_type 0 209 1 667 178 22 0 chr5 180922257 180922395 -22163137 + L1MB7 LINE L1 5520 5666 -518 2593 150 17 35 chr5 180922506 180922865 -22162667 + L1MB7 LINE L1 5674 6023 -161 2554 72 0 0 chr5 180922865 180923171 -22162361 - AluY SINE Alu -5 306 1 2593 150 17 35 chr5 180923171 180923331 -22162201 + L1MB7 LINE L1 6023 6184 0 374 264 94 26 chr5 180923332 180923488 -22162044 + L1MC4a LINE L1 5706 5829 -341 712 117 17 8 chr5 180923491 180923611 -22161921 + FLAM_C SINE Alu 13 133 -10 235 194 16 0 chr5 180923707 180923769 -22161763 + L1ME4a LINE L1 5946 6008 -113 2125 101 0 0 chr5 180923915 180924191 -22161341 + AluSx SINE Alu 37 312 0 183 100 0 0 chr5 180924832 180924862 -22160670 + (TC)n Simple_repeat Simple_repeat 2 31 0 381 22 0 0 chr5 180924862 180924908 -22160624 + (CA)n Simple_repeat Simple_repeat 1 46 0 508 233 17 91 chr5 180925580 180925756 -22159776 - MIR SINE MIR -23 239 77 * 843 283 24 90 chr5 180925753 180926047 -22159485 - L2 LINE L2 -14 3299 2987 1678 145 97 17 chr5 180926047 180926336 -22159196 + AluSx SINE Alu 1 312 0 843 283 24 90 chr5 180926336 180926686 -22158846 - L2 LINE L2 -326 2987 2715 2669 52 0 0 chr5 180926686 180926996 -22158536 - AluY SINE Alu -1 310 1 843 283 24 90 chr5 180926996 180927118 -22158414 - L2 LINE L2 -598 2715 2587 640 193 31 6 chr5 180927285 180927446 -22158086 - L1ME3A LINE L1 -5 6165 6001 584 288 28 41 chr5 180927874 180928008 -22157524 - MIR SINE MIR -6 256 126 2015 116 7 7 chr5 180928008 180928316 -22157216 + AluSq SINE Alu 1 308 0 584 288 28 41 chr5 180928316 180928432 -22157100 - MIR SINE MIR -136 126 10 260 159 152 65 chr5 180929442 180929580 -22155952 - L1ME4a LINE L1 -11 6110 5961 268 265 26 17 chr5 180929688 180929805 -22155727 - L1ME4a LINE L1 -347 5774 5657 885 246 19 9 chr5 180929809 180930024 -22155508 - MIR SINE MIR -32 230 14 476 283 22 17 chr5 180930024 180930204 -22155328 - L1ME4a LINE L1 -468 5653 5473 1829 166 18 15 chr5 180933096 180933434 -22152098 - MER44D DNA MER2_type 0 609 1 342 298 51 11 chr5 180933515 180933693 -22151839 + MIR SINE MIR 78 262 0 2107 139 10 0 chr5 180934027 180934330 -22151202 + AluSx SINE Alu 1 306 -6 404 276 110 0 chr5 180934510 180934655 -22150877 + MIR SINE MIR 31 191 -71 1845 184 9 14 chr5 180935116 180935463 -22150069 - MLT1A1 LTR MaLR 0 365 21 244 289 53 0 chr5 180936694 180936770 -22148762 - MIR3 SINE MIR -20 188 109 207 146 0 0 chr5 180936847 180936888 -22148644 + (TC)n Simple_repeat Simple_repeat 2 42 0 950 159 44 33 chr5 180936909 180937091 -22148441 + AluJo SINE Alu 1 184 -128 419 327 125 13 chr5 180937410 180937786 -22147746 - L1MC4a LINE L1 -1895 5913 5496 2157 127 3 0 chr5 180937846 180938145 -22147387 - AluSx SINE Alu -12 300 1 1861 164 3 13 chr5 180938195 180938499 -22147033 + AluJb SINE Alu 1 301 -11 1982 124 28 3 chr5 180938640 180938931 -22146601 + AluSq SINE Alu 14 311 -2 360 256 37 30 chr5 180939620 180939784 -22145748 - L1MC4a LINE L1 -1524 4622 4458 216 274 0 0 chr5 180940288 180940339 -22145193 - L2 LINE L2 -11 3261 3211 229 292 125 31 chr5 180940359 180940455 -22145077 - L2 LINE L2 -10 3303 3199 36 40 0 0 chr5 180940745 180940795 -22144737 + AT_rich Low_complexity Low_complexity 1 50 0 272 321 18 9 chr5 180940890 180941002 -22144530 + MIR SINE MIR 32 144 -118 604 212 79 24 chr5 180941533 180941698 -22143834 + FAM SINE Alu 2 175 0 221 238 143 0 chr5 180941718 180941781 -22143751 - MER5A DNA MER1_type -107 82 11 342 361 12 30 chr5 180941827 180941993 -22143539 - L2 LINE L2 -2 3270 3108 320 194 201 22 chr5 180942144 180942278 -22143254 + MIR SINE MIR 49 206 -56 223 344 0 0 chr5 180942742 180942832 -22142700 - MIR3 SINE MIR -1 207 118 1674 147 46 4 chr5 180942925 180943184 -22142348 + AluSg SINE Alu 24 293 -17 201 187 13 67 chr5 180943378 180943453 -22142079 + (CATTT)n Simple_repeat Simple_repeat 2 72 0 313 193 165 37 chr5 180943504 180943613 -22141919 + MIR SINE MIR 124 246 -16 1162 131 6 11 chr5 180943643 180943826 -22141706 - AluJo SINE Alu -11 301 120 720 186 31 0 chr5 180943860 180944038 -22141494 - FLAM_C SINE Alu 0 182 1 393 243 66 33 chr5 180944066 180944218 -22141314 - L1ME4a LINE L1 -2 6119 5963 195 186 0 0 chr5 180944262 180944305 -22141227 + (TA)n Simple_repeat Simple_repeat 1 43 0 319 282 73 32 chr5 180944329 180944453 -22141079 + MIR SINE MIR 12 140 -122 225 315 11 0 chr5 180944570 180944662 -22140870 + MIR SINE MIR 170 262 0 185 189 0 57 chr5 180945126 180945179 -22140353 - L2 LINE L2 -6 3307 3258 1017 250 76 14 chr5 180945183 180945527 -22140005 - MER113 DNA MER1_type? -96 425 61 368 299 133 21 chr5 180945849 180946083 -22139449 - MIR SINE MIR -1 261 2 220 197 0 76 chr5 180946141 180946207 -22139325 + MIR SINE MIR 66 126 -82 219 36 0 0 chr5 180946802 180946830 -22138702 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 445 125 0 0 chr5 180946838 180946902 -22138630 - AluSq SINE Alu -54 259 196 1040 109 7 0 chr5 180946909 180947047 -22138485 - AluSq SINE Alu -173 139 1 604 218 75 11 chr5 180947288 180947462 -22138070 - MIR SINE MIR -44 218 34 465 319 103 23 chr5 180947522 180948009 -22137523 + L1MC4a LINE L1 5403 5814 -307 445 279 99 17 chr5 180948422 180948594 -22136938 - MIR SINE MIR -3 259 74 259 267 53 0 chr5 180949032 180949107 -22136425 + L2 LINE L2 3194 3272 0 263 250 39 62 chr5 180949179 180949307 -22136225 + MIR SINE MIR 137 261 -1 607 136 0 0 chr5 180949488 180949576 -22135956 - AluSq/x SINE Alu -204 109 22 772 167 23 8 chr5 180949720 180949852 -22135680 - AluJo SINE Alu -177 135 2 221 317 73 0 chr5 180950492 180950574 -22134958 + MIR3 SINE MIR 110 197 -11 339 283 0 0 chr5 180950944 180951040 -22134492 + MIR SINE MIR 52 143 -65 537 330 64 35 chr5 180951290 180951770 -22133762 - L1MC4a LINE L1 -745 5401 5418 1957 154 10 10 chr5 180951770 180952075 -22133457 - AluJo SINE Alu -7 305 1 537 330 64 35 chr5 180952075 180952283 -22133249 - L1MC4a LINE L1 -727 5419 5218 285 300 80 0 chr5 180952439 180952539 -22132993 + MIR SINE MIR 155 262 0 219 302 29 70 chr5 180952608 180952780 -22132752 - L2 LINE L2 -216 3056 2892 258 95 0 0 chr5 180953002 180953044 -22132488 + (CCG)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr5 180953282 180953305 -22132227 + GC_rich Low_complexity Low_complexity 1 23 0 222 184 0 0 chr5 180953511 180953549 -22131983 + G-rich Low_complexity Low_complexity 1 38 0 416 252 115 22 chr5 180954684 180954823 -22130709 + MIR3 SINE MIR 36 187 -21 291 222 97 0 chr5 180955072 180955144 -22130388 - MLT1K LTR MaLR -77 511 433 2358 87 10 3 chr5 180955328 180955626 -22129906 + AluSq SINE Alu 1 300 -13 390 231 216 15 chr5 180955788 180955922 -22129610 - MIR3 SINE MIR -27 181 21 229 257 185 12 chr5 180956288 180956382 -22129150 + MIR SINE MIR 12 121 -87 796 289 18 0 chr5 180956960 180957178 -22128354 + MIR SINE MIR 39 260 -2 1615 112 85 68 chr5 180957347 180957641 -22127891 + AluSx SINE Alu 1 299 -13 378 307 131 0 chr5 180957843 180957996 -22127536 + MIR SINE MIR 47 219 -43 1229 235 74 66 chr5 180958738 180959240 -22126292 + L2 LINE L2 2808 3313 0 208 143 0 0 chr5 180959345 180959380 -22126152 - L2 LINE L2 -218 3054 3020 205 171 0 0 chr5 180959867 180959902 -22125630 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 885 145 38 0 chr5 180960018 180960149 -22125383 + AluJo SINE Alu 1 136 -176 645 318 36 16 chr5 180960187 180960439 -22125093 + MIR SINE MIR 4 260 -2 2190 109 10 0 chr5 180960561 180960855 -22124677 + AluSx SINE Alu 1 297 -15 242 327 72 3 chr5 180961264 180961401 -22124131 - MIR SINE MIR -73 135 19 798 300 33 4 chr5 180961476 180961716 -22123816 + MIR SINE MIR 3 249 -13 357 219 12 0 chr5 180962041 180962123 -22123409 + MER112 DNA MER1_type 1 83 -177 1009 206 27 27 chr5 180962152 180962371 -22123161 - MER20 DNA MER1_type 0 219 1 2367 99 0 3 chr5 180962466 180962770 -22122762 - AluY SINE Alu -8 303 1 238 94 0 0 chr5 180962802 180962834 -22122698 + Alu SINE Alu 1 32 -270 724 235 155 39 chr5 180962858 180963168 -22122364 + MLT1G3 LTR MaLR 3 329 -201 351 281 141 8 chr5 180963462 180963583 -22121949 - MIR SINE MIR -84 178 42 1965 258 208 20 chr5 180964853 180965672 -22119860 + L2 LINE L2 1710 2373 -940 2073 122 16 38 chr5 180965672 180965991 -22119541 + AluSq SINE Alu 1 312 -1 1965 258 208 20 chr5 180965991 180966516 -22119016 + L2 LINE L2 2373 3313 0 690 251 77 20 chr5 180966553 180966748 -22118784 - MER63A DNA MER1_type -1 209 4 1503 181 12 0 chr5 180967190 180967438 -22118094 - AluJo SINE Alu -49 263 13 316 310 109 35 chr5 180967603 180967777 -22117755 - MER5A DNA MER1_type -2 187 1 269 218 0 0 chr5 180967779 180967834 -22117698 + Tigger5 DNA MER2_type 1 55 -2268 * 338 186 0 14 chr5 180967804 180967874 -22117658 + Tigger5 DNA MER2_type 2252 2320 -3 248 253 38 13 chr5 180968882 180968961 -22116571 - L2 LINE L2 -39 3233 3153 2068 166 24 98 chr5 180968963 180969506 -22116026 + MLT1D LTR MaLR 1 503 -2 1253 191 5 14 chr5 180969753 180969963 -22115569 + AluJo SINE Alu 1 208 -104 393 100 0 17 chr5 180969965 180970025 -22115507 - L1M3 LINE L1 -426 5757 5699 472 157 101 0 chr5 181020036 181020125 -22065407 + Tigger1 DNA MER2_type 196 293 -2125 358 123 12 12 chr5 181020133 181020214 -22065318 + (TTCC)n Simple_repeat Simple_repeat 2 82 0 1629 166 13 19 chr5 181020214 181020527 -22065005 - AluJo SINE Alu -1 311 1 427 143 52 0 chr5 181020541 181020618 -22064914 + Tigger1 DNA MER2_type 333 413 -2005 1639 141 0 72 chr5 181020618 181020755 -22064777 + AluJb SINE Alu 1 146 -166 2321 63 0 0 chr5 181020755 181021040 -22064492 + AluY SINE Alu 1 285 -26 1639 141 0 72 chr5 181021040 181021221 -22064311 + AluJb SINE Alu 146 296 -16 333 129 40 105 chr5 181021243 181021367 -22064165 + L1ME4a LINE L1 5988 6103 -18 3122 33 3 0 chr5 181022487 181022854 -22062678 + L1PA4 LINE L1 5785 6152 -3 1935 115 25 4 chr5 181022979 181023257 -22062275 - AluSq SINE Alu -29 284 1 214 300 62 38 chr5 181023295 181023375 -22062157 + MIR SINE MIR 21 102 -160 289 260 14 14 chr5 181023390 181023463 -22062069 + MIR SINE MIR 31 103 -159 2209 91 16 0 chr5 181023463 181023770 -22061762 - AluSq SINE Alu -1 312 1 448 164 0 0 chr5 181023876 181023943 -22061589 + AluJ/FRAM SINE Alu 228 294 -18 754 190 0 0 chr5 181024016 181024132 -22061400 + AluJo/FLAM SINE Alu 2 117 -195 2132 92 7 3 chr5 181024135 181024429 -22061103 - AluSx SINE Alu -17 295 1 2316 71 3 0 chr5 181025045 181025339 -22060193 + AluY SINE Alu 1 295 -16 386 196 216 20 chr5 181025362 181025464 -22060068 + MIR SINE MIR 49 170 -92 1852 111 7 7 chr5 181025539 181025827 -22059705 + AluY SINE Alu 3 290 -21 2418 67 0 3 chr5 181025875 181026187 -22059345 - AluY SINE Alu 0 311 1 1778 88 0 4 chr5 181026221 181026459 -22059073 + AluSg SINE Alu 64 300 -10 196 203 203 0 chr5 181026486 181026545 -22058987 + L2 LINE L2 3202 3272 0 344 285 82 86 chr5 181027109 181027376 -22058156 + L1ME4a LINE L1 5855 6120 -1 1107 190 18 0 chr5 181027435 181027661 -22057871 - AluJo SINE Alu -2 310 81 295 143 0 32 chr5 181027661 181027674 -22057858 + L1ME4a LINE L1 6061 6073 -48 2196 119 0 0 chr5 181027674 181027985 -22057547 - AluSx SINE Alu -1 311 1 295 143 0 32 chr5 181027985 181028034 -22057498 + L1ME4a LINE L1 6073 6121 0 293 216 0 0 chr5 181028266 181028317 -22057215 + Tigger1 DNA MER2_type 2 52 -2366 726 168 7 28 chr5 181028319 181028462 -22057070 - FRAM SINE Alu -6 170 31 689 182 123 0 chr5 181028463 181028617 -22056915 + Tigger1 DNA MER2_type 54 226 -2192 333 240 185 59 chr5 181028781 181029141 -22056391 + MLT1K LTR MaLR 144 580 -8 213 235 0 0 chr5 181029150 181029201 -22056331 + MIR SINE MIR 199 249 -13 447 300 53 41 chr5 181029467 181029637 -22055895 + MIR SINE MIR 21 192 -70 500 265 0 8 chr5 181029672 181029789 -22055743 - MIR SINE MIR -26 236 121 2359 90 0 0 chr5 181029790 181030101 -22055431 + AluSq SINE Alu 1 311 -2 2042 108 3 10 chr5 181030303 181030591 -22054941 - AluSx SINE Alu -26 286 1 1973 116 31 0 chr5 181030601 181030894 -22054638 - AluSg SINE Alu -8 302 1 729 305 19 16 chr5 181031253 181031571 -22053961 + L1MC4 LINE L1 5605 5923 -1885 2044 132 0 0 chr5 181031994 181032290 -22053242 - AluSq SINE Alu -17 296 1 757 255 113 111 chr5 181032290 181032420 -22053112 + MLT1G1 LTR MaLR 2 130 -437 2042 124 0 0 chr5 181032420 181032718 -22052814 - AluSg SINE Alu -12 298 1 757 255 113 111 chr5 181032718 181032956 -22052576 + MLT1G1 LTR MaLR 130 366 -201 2246 96 3 0 chr5 181032956 181033258 -22052274 + AluSg1 SINE Alu 1 303 -6 757 255 113 111 chr5 181033258 181033269 -22052263 + MLT1G1 LTR MaLR 366 375 -192 2143 119 0 3 chr5 181033269 181033580 -22051952 + AluSq SINE Alu 1 310 -3 757 255 113 111 chr5 181033580 181033728 -22051804 + MLT1G1 LTR MaLR 375 535 -32 567 270 90 26 chr5 181033804 181033993 -22051539 - MIR SINE MIR -31 231 31 257 186 29 14 chr5 181034071 181034141 -22051391 - Charlie8 DNA MER1_type -990 1427 1357 * 519 169 149 74 chr5 181034140 181034205 -22051327 - Charlie8 DNA MER1_type -96 234 175 1577 205 0 0 chr5 181034205 181034508 -22051024 - AluJo SINE Alu -9 303 1 519 169 149 74 chr5 181034508 181034590 -22050942 - Charlie8 DNA MER1_type -155 175 76 182 233 23 0 chr5 181034668 181034711 -22050821 + MIR3 SINE MIR 151 194 -14 305 304 0 13 chr5 181035138 181035217 -22050315 - L1MCa LINE L1 -4354 2072 1995 * 384 279 47 0 chr5 181035171 181035257 -22050275 + L1MC4 LINE L1 6614 6703 -1339 343 197 0 24 chr5 181035204 181035280 -22050252 - L1MC4 LINE L1 -1339 6983 1996 * 2460 64 0 3 chr5 181037973 181038285 -22047247 + AluY SINE Alu 1 311 0 367 212 92 49 chr5 181038317 181038501 -22047031 + MER112 DNA MER1_type 68 259 -1 1946 142 23 3 chr5 181038896 181039199 -22046333 - AluJb SINE Alu -3 309 1 1472 102 5 5 chr5 181039743 181039948 -22045584 + AluSc SINE Alu 89 293 -16 1958 148 0 3 chr5 181040061 181040192 -22045340 + AluSx SINE Alu 3 133 -179 2222 93 3 0 chr5 181040192 181040494 -22045038 + AluSx SINE Alu 5 307 -5 1958 148 0 3 chr5 181040494 181040672 -22044860 + AluSx SINE Alu 133 311 -1 219 218 0 0 chr5 181040688 181040743 -22044789 + GA-rich Low_complexity Low_complexity 2 56 0 813 161 0 0 chr5 181040763 181040887 -22044645 + FLAM_C SINE Alu 1 124 -9 1014 90 12 12 chr5 181040891 181041057 -22044475 + (GAAA)n Simple_repeat Simple_repeat 1 166 0 204 183 43 151 chr5 181041620 181041645 -22043887 - MIR SINE MIR -71 191 165 1783 126 45 39 chr5 181041645 181041812 -22043720 - AluJo SINE Alu 0 312 141 2205 93 3 3 chr5 181041812 181042114 -22043418 - AluSq SINE Alu -10 303 2 1783 126 45 39 chr5 181042114 181042256 -22043276 - AluJo SINE Alu -171 141 1 204 183 43 151 chr5 181042256 181042323 -22043209 - MIR SINE MIR -97 165 109 2159 117 0 16 chr5 181042628 181042945 -22042587 - AluSx SINE Alu 0 312 1 2626 175 6 18 chr5 181042985 181043493 -22042039 + L1 LINE L1 4533 5034 -1112 1222 91 0 11 chr5 181043508 181043683 -22041849 + AluSq SINE Alu 141 313 0 3028 192 43 20 chr5 181043683 181043799 -22041733 + L1PA16 LINE L1 5488 5600 -566 1954 131 7 3 chr5 181043799 181044089 -22041443 + AluSq SINE Alu 1 291 -22 3028 192 43 20 chr5 181044089 181044624 -22040908 + L1PA16 LINE L1 5600 6154 -12 2189 95 3 0 chr5 181044639 181044934 -22040598 - AluSp SINE Alu -17 296 1 23 54 0 0 chr5 181044939 181044976 -22040556 + AT_rich Low_complexity Low_complexity 1 37 0 439 298 142 0 chr5 181044982 181045123 -22040409 + MIR SINE MIR 102 262 0 224 294 143 48 chr5 181045119 181045245 -22040287 - L2 LINE L2 -18 3295 3158 * 2190 68 11 0 chr5 181045255 181045572 -22039960 + AluY SINE Alu 1 320 0 1886 101 33 59 chr5 181045760 181046067 -22039465 + AluSq SINE Alu 3 301 -12 242 319 57 35 chr5 181046275 181046416 -22039116 - MER5A DNA MER1_type -4 185 42 365 229 0 0 chr5 181046435 181046505 -22039027 + MIR SINE MIR 53 122 -140 2025 118 3 3 chr5 181046506 181046803 -22038729 - AluSx SINE Alu -14 298 2 1377 192 45 7 chr5 181046857 181047143 -22038389 + AluSx SINE Alu 1 297 -15 294 230 68 14 chr5 181048290 181048364 -22037168 - L2 LINE L2 -8 3264 3187 251 211 158 0 chr5 181049000 181049057 -22036475 - MIR SINE MIR -140 122 57 1871 135 0 22 chr5 181049338 181049657 -22035875 + AluSx SINE Alu 1 312 0 794 195 136 56 chr5 181049661 181049948 -22035584 + AluJo SINE Alu 1 310 -2 2211 152 97 61 chr5 181050139 181050388 -22035144 + L1MB2 LINE L1 5582 5821 -350 1938 142 3 0 chr5 181050388 181050683 -22034849 + AluSx SINE Alu 1 296 -16 2211 152 97 61 chr5 181050683 181051002 -22034530 + L1MB2 LINE L1 5821 6170 -1 565 207 143 93 chr5 181051029 181051150 -22034382 + AluJo SINE Alu 18 132 -180 1986 122 3 13 chr5 181051150 181051454 -22034078 + AluSq SINE Alu 1 301 -12 1833 104 62 3 chr5 181051457 181051746 -22033786 + AluSq SINE Alu 1 306 -7 565 207 143 93 chr5 181051746 181051900 -22033632 + AluJo SINE Alu 133 311 -1 715 246 275 19 chr5 181051914 181052540 -22032992 + L1MC4 LINE L1 7223 8008 -34 2135 134 3 6 chr5 181053164 181053477 -22032055 + AluSx SINE Alu 1 312 0 1448 159 98 15 chr5 181053515 181053779 -22031753 + AluSg SINE Alu 9 294 -16 1650 158 88 14 chr5 181053885 181054021 -22031511 + AluSx SINE Alu 1 126 -186 2423 92 0 3 chr5 181054021 181054326 -22031206 + AluSx SINE Alu 1 304 -8 1650 158 88 14 chr5 181054326 181054473 -22031059 + AluSx SINE Alu 126 305 -7 1632 141 27 8 chr5 181054683 181054939 -22030593 - AluJb SINE Alu -22 290 30 1013 99 0 0 chr5 181054941 181055094 -22030438 + AluSg/x SINE Alu 155 307 0 2164 97 21 0 chr5 181055422 181055728 -22029804 + AluSq SINE Alu 1 312 0 907 133 0 15 chr5 181055789 181055924 -22029608 + FLAM_C SINE Alu 1 133 0 1200 108 0 12 chr5 181055984 181056151 -22029381 + AluSx SINE Alu 1 165 -147 1696 129 8 8 chr5 181056253 181056494 -22029038 - AluSx SINE Alu -71 241 1 1162 68 0 0 chr5 181056494 181056626 -22028906 - AluSq/x SINE Alu -177 135 4 620 250 76 6 chr5 181056968 181057140 -22028392 - MIR SINE MIR -56 206 23 831 145 4 162 chr5 181057140 181057237 -22028295 + L1M4 LINE L1 5190 5301 -883 2383 85 3 0 chr5 181057237 181057531 -22028001 + AluSp SINE Alu 6 300 -13 831 145 4 162 chr5 181057531 181057568 -22027964 + L1M4 LINE L1 5301 5342 -842 1869 172 3 3 chr5 181057568 181057876 -22027656 + AluJb SINE Alu 1 308 -4 831 145 4 162 chr5 181057876 181057900 -22027632 + L1M4 LINE L1 5342 5368 -816 810 131 16 8 chr5 181057900 181058022 -22027510 + FLAM_C SINE Alu 1 123 -10 831 145 4 162 chr5 181058022 181058206 -22027326 + L1M4 LINE L1 5368 5483 -701 2358 103 0 0 chr5 181058206 181058507 -22027025 + AluY SINE Alu 1 301 -10 831 145 4 162 chr5 181058507 181058525 -22027007 + L1M4 LINE L1 5483 5502 -682 262 275 88 0 chr5 181058528 181058608 -22026924 + MIR3 SINE MIR 106 192 -16 316 300 0 0 chr5 181058667 181058747 -22026785 - MER117 DNA MER1_type -104 93 14 495 284 80 49 chr5 181058857 181058945 -22026587 + MIR SINE MIR 19 103 -159 2145 128 3 31 chr5 181058945 181059266 -22026266 - AluSx SINE Alu 0 312 1 495 284 80 49 chr5 181059266 181059402 -22026130 + MIR SINE MIR 103 250 -12 323 253 107 0 chr5 181059517 181059592 -22025940 - L2 LINE L2 -51 3221 3139 813 148 59 84 chr5 181059701 181059858 -22025674 + MER20 DNA MER1_type 22 174 -45 2248 98 14 0 chr5 181059858 181060154 -22025378 + AluSx SINE Alu 1 300 -12 813 148 59 84 chr5 181060154 181060199 -22025333 + MER20 DNA MER1_type 174 219 0 206 278 68 105 chr5 181060258 181060359 -22025173 - L2 LINE L2 -500 2814 2718 2099 140 0 9 chr5 181060359 181060674 -22024858 - AluSq SINE Alu -1 312 1 206 278 68 105 chr5 181060674 181060705 -22024827 - L2 LINE L2 -596 2718 2687 2515 76 0 0 chr5 181060706 181061008 -22024524 + AluY SINE Alu 1 302 -9 2160 130 0 3 chr5 181061008 181061307 -22024225 + AluSc SINE Alu 1 298 -11 435 239 67 9 chr5 181062048 181062214 -22023318 + MIR SINE MIR 18 188 -62 756 105 7 92 chr5 181062394 181062498 -22023034 - MER41A LTR ERV1 0 554 465 2093 116 6 58 chr5 181062498 181062827 -22022705 - AluSq SINE Alu -1 312 1 756 105 7 92 chr5 181062827 181062875 -22022657 - MER41A LTR ERV1 -89 465 415 2344 89 7 0 chr5 181062876 181063178 -22022354 + AluSx SINE Alu 2 305 -7 733 152 110 0 chr5 181063178 181063323 -22022209 - THE1C LTR MaLR -214 161 1 970 126 19 0 chr5 181063323 181063482 -22022050 - L1M1 LINE L1 -551 5749 5588 281 310 127 7 chr5 181063648 181063790 -22021742 - L3 LINE CR1 -73 1504 1346 2237 109 3 0 chr5 181063899 181064193 -22021339 - AluSg SINE Alu -10 300 6 2335 131 0 0 chr5 181064204 181064516 -22021016 - AluSx SINE Alu 0 312 1 812 179 0 0 chr5 181064534 181064657 -22020875 - FLAM_A SINE Alu -10 123 1 265 289 72 0 chr5 181064920 181065017 -22020515 - Charlie8 DNA MER1_type -1938 479 376 2286 120 0 0 chr5 181065082 181065382 -22020150 + AluSx SINE Alu 1 300 -12 287 319 70 6 chr5 181065531 181065688 -22019844 - Charlie8 DNA MER1_type -2248 169 3 2124 128 0 3 chr5 181065708 181066014 -22019518 - AluSg1 SINE Alu -2 307 3 1602 195 3 17 chr5 181066016 181066318 -22019214 - AluJo SINE Alu -8 304 7 883 237 171 43 chr5 181067135 181067510 -22018022 + MLT1K LTR MaLR 4 426 -162 259 224 0 82 chr5 181067539 181067637 -22017895 + MLT1K LTR MaLR 411 500 -88 368 255 108 39 chr5 181067852 181068116 -22017416 + MER34 LTR ERV1 353 538 -4 4145 124 19 9 chr5 181068336 181068965 -22016567 - MER41B LTR ERV1 0 635 1 380 335 30 75 chr5 181069094 181069425 -22016107 - L2 LINE L2 -86 3186 2871 187 326 11 33 chr5 181069834 181069926 -22015606 + MIR SINE MIR 1 90 -172 1720 150 35 45 chr5 181069926 181070240 -22015292 - AluJo SINE Alu 0 312 2 472 221 9 35 chr5 181070273 181070386 -22015146 - AluY SINE Alu -5 306 197 2199 137 0 0 chr5 181070573 181070880 -22014652 - AluSx SINE Alu -1 311 5 189 309 45 64 chr5 181070887 181070997 -22014535 - MIR SINE MIR -70 192 85 23 0 0 0 chr5 181071021 181071044 -22014488 + AT_rich Low_complexity Low_complexity 1 23 0 2295 117 7 0 chr5 181071047 181071356 -22014176 - AluSx SINE Alu -1 311 1 1154 84 179 45 chr5 181072112 181072313 -22013219 + AluSg/x SINE Alu 83 307 0 250 326 65 29 chr5 181072315 181072453 -22013079 + MER5A DNA MER1_type 4 146 -43 684 164 49 0 chr5 181072840 181072962 -22012570 - FLAM_C SINE Alu -14 129 2 1016 171 71 0 chr5 181073021 181073191 -22012341 - AluSg/x SINE Alu -13 297 116 521 53 67 0 chr5 181073192 181073267 -22012265 - MER30 DNA MER1_type -150 80 1 810 280 50 34 chr5 181073278 181073599 -22011933 - MLT1E LTR MaLR -267 326 1 2197 106 3 0 chr5 181073642 181073967 -22011565 + AluSq SINE Alu 1 326 0 357 194 15 0 chr5 181074346 181074413 -22011119 + MER81 DNA DNA 11 78 -36 2240 96 3 7 chr5 181074417 181074708 -22010824 + AluSc SINE Alu 2 291 -18 2425 65 0 32 chr5 181074711 181075021 -22010511 + AluY SINE Alu 1 300 -11 1612 176 0 7 chr5 181075440 181075719 -22009813 - AluJb SINE Alu 0 312 36 1801 85 0 5 chr5 181075748 181075972 -22009560 + AluSg/x SINE Alu 86 308 -2 314 258 351 11 chr5 181076265 181076533 -22008999 + L2 LINE L2 2914 3272 0 356 287 11 0 chr5 181076689 181076783 -22008749 + MIR SINE MIR 66 160 -102 343 263 61 0 chr5 181076853 181076922 -22008610 + MIR SINE MIR 121 199 -63 2319 96 0 7 chr5 181076922 181077243 -22008289 + AluSx SINE Alu 1 312 0 343 263 61 0 chr5 181077243 181077272 -22008260 + MIR SINE MIR 199 225 -37 199 267 282 0 chr5 181077321 181077452 -22008080 + MIR3 SINE MIR 34 201 -7 592 266 92 22 chr5 181077858 181078042 -22007490 + MIR3 SINE MIR 3 199 -9 419 200 95 29 chr5 181078090 181078195 -22007337 - L2 LINE L2 -6 3266 3155 1865 177 0 0 chr5 181078218 181078525 -22007007 - AluJb SINE Alu 0 307 1 190 333 28 0 chr5 181078651 181078723 -22006809 + L2 LINE L2 2888 2961 -311 258 56 0 0 chr5 181078761 181078797 -22006735 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 241 306 82 0 chr5 181078810 181078895 -22006637 - L2 LINE L2 -26 3246 3155 1917 178 3 0 chr5 181078911 181079220 -22006312 - AluSx SINE Alu -2 310 1 1804 162 7 7 chr5 181079222 181079506 -22006026 - AluJo SINE Alu -18 294 11 2443 79 7 0 chr5 181079532 181079824 -22005708 - AluY SINE Alu -8 303 10 1905 83 4 32 chr5 181079824 181079941 -22005591 - AluSg SINE Alu -61 249 130 2182 131 0 0 chr5 181079941 181080239 -22005293 - AluSg SINE Alu -10 300 3 1905 83 4 32 chr5 181080239 181080373 -22005159 - AluSg SINE Alu -180 130 5 1652 156 4 18 chr5 181081019 181081295 -22004237 + AluJb SINE Alu 31 302 -10 2160 89 3 54 chr5 181081376 181081691 -22003841 + AluSx SINE Alu 1 299 -13 2202 111 3 0 chr5 181081693 181081981 -22003551 + AluSp SINE Alu 1 289 -24 227 104 21 0 chr5 181081987 181082035 -22003497 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 493 232 8 0 chr5 181082035 181082160 -22003372 + Charlie5 DNA MER1_type 2499 2624 0 2305 82 7 16 chr5 181082181 181082316 -22003216 + AluSq SINE Alu 1 136 -177 2235 121 0 3 chr5 181082316 181082622 -22002910 + AluSg SINE Alu 1 305 -5 2305 82 7 16 chr5 181082622 181082778 -22002754 + AluSq SINE Alu 136 291 -22 2287 124 0 3 chr5 181082778 181083092 -22002440 + AluSq SINE Alu 1 313 0 2305 82 7 16 chr5 181083092 181083104 -22002428 + AluSq SINE Alu 291 302 -11 878 344 50 16 chr5 181083287 181083711 -22001821 - L2 LINE L2 -5 3267 2830 1787 157 4 0 chr5 181083924 181084191 -22001341 + AluSg SINE Alu 19 286 -24 25 31 0 0 chr5 181084197 181084229 -22001303 + AT_rich Low_complexity Low_complexity 1 32 0 2009 115 7 4 chr5 181084346 181084653 -22000879 - AluSx SINE Alu 0 310 3 224 241 35 0 chr5 181084680 181084738 -22000794 + MIR SINE MIR 73 132 -130 3709 177 27 56 chr5 181084871 181085029 -22000503 - L1MD2 LINE L1 -184 6175 6014 2229 118 3 0 chr5 181085029 181085326 -22000206 - AluSx SINE Alu -14 298 1 3709 177 27 56 chr5 181085326 181085670 -21999862 - L1MD2 LINE L1 -345 6014 5662 2326 103 3 0 chr5 181085670 181085970 -21999562 - AluSc SINE Alu -8 301 1 3709 177 27 56 chr5 181085970 181086397 -21999135 - L1MD2 LINE L1 -697 5662 5272 1620 192 0 27 chr5 181086398 181086695 -21998837 - AluJo SINE Alu -1 311 23 1111 232 28 33 chr5 181086712 181086889 -21998643 - L1MD2 LINE L1 -858 5288 5112 2141 108 29 16 chr5 181086889 181087196 -21998336 - AluSx SINE Alu 0 312 2 1111 232 28 33 chr5 181087196 181087380 -21998152 - L1MD2 LINE L1 -1034 5112 4929 1897 100 111 11 chr5 181087383 181087662 -21997870 - AluSg1 SINE Alu -2 307 1 488 175 0 12 chr5 181087663 181087743 -21997789 - AluJ/FLAM SINE Alu -232 80 2 219 296 278 6 chr5 181087852 181088028 -21997504 - MIR SINE MIR -19 243 20 2197 99 7 10 chr5 181088732 181089034 -21996498 - AluSx SINE Alu -11 301 1 185 300 71 14 chr5 181089054 181089124 -21996408 + MIR SINE MIR 57 130 -78 2016 145 0 3 chr5 181089388 181089678 -21995854 + AluSx SINE Alu 1 289 -23 1640 173 99 0 chr5 181089726 181090038 -21995494 - AluJo SINE Alu 0 340 1 1466 188 0 80 chr5 181090261 181090444 -21995088 - AluJo SINE Alu -14 298 151 2322 100 0 0 chr5 181090444 181090733 -21994799 + AluSq SINE Alu 2 290 -23 1466 188 0 80 chr5 181090733 181090873 -21994659 - AluJo SINE Alu -161 151 1 198 0 0 0 chr5 181090916 181090938 -21994594 + (T)n Simple_repeat Simple_repeat 1 22 0 1519 134 5 0 chr5 181090952 181091161 -21994371 - AluSp SINE Alu -103 210 1 2213 96 3 0 chr5 181091173 181091486 -21994046 - AluSp SINE Alu 0 314 1 551 214 94 71 chr5 181091494 181091620 -21993912 - L1MC5 LINE L1 -236 7725 7603 1902 137 0 11 chr5 181091620 181091891 -21993641 + AluSx SINE Alu 34 301 -11 551 214 94 71 chr5 181091891 181092068 -21993464 - L1MC5 LINE L1 -354 7607 7414 383 16 62 0 chr5 181092068 181092132 -21993400 + (TA)n Simple_repeat Simple_repeat 2 69 0 2190 137 0 0 chr5 181092618 181092917 -21992615 + AluSx SINE Alu 1 299 -13 764 177 8 0 chr5 181092924 181093048 -21992484 + FLAM_C SINE Alu 1 125 -8 26 30 0 0 chr5 181093795 181093828 -21991704 + AT_rich Low_complexity Low_complexity 1 33 0 1909 134 67 0 chr5 181093881 181094165 -21991367 - AluSq SINE Alu -10 303 1 2223 115 3 10 chr5 181094775 181095080 -21990452 + AluSx SINE Alu 1 303 -9 389 315 111 28 chr5 181095448 181095629 -21989903 - MIR SINE MIR -1 261 66 614 102 0 0 chr5 181096105 181096193 -21989339 - AluSg/x SINE Alu -9 303 216 441 98 65 111 chr5 181096312 181096465 -21989067 - AluSg/x SINE Alu 0 309 164 186 103 0 0 chr5 181096639 181096668 -21988864 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1709 164 28 47 chr5 181096686 181097004 -21988528 - AluJo SINE Alu 0 312 1 207 0 0 0 chr5 181097190 181097213 -21988319 + (A)n Simple_repeat Simple_repeat 1 23 0 747 264 46 66 chr5 181097240 181097345 -21988187 - L2 LINE L2 -993 2321 2215 2218 87 0 64 chr5 181097345 181097518 -21988014 - AluSp SINE Alu -21 292 146 2437 75 3 3 chr5 181097518 181097826 -21987706 - AluY SINE Alu -1 310 3 2218 87 0 64 chr5 181097826 181097964 -21987568 - AluSp SINE Alu -167 146 1 747 264 46 66 chr5 181097964 181098206 -21987326 - L2 LINE L2 -1099 2215 1981 246 293 143 20 chr5 181098222 181098573 -21986959 - L2 LINE L2 -2285 1029 636 3714 103 12 9 chr5 181098583 181099155 -21986377 + LTR10C LTR ERV1 1 547 0 1537 157 44 41 chr5 181099284 181099577 -21985955 + AluSx SINE Alu 1 294 -18 710 137 0 40 chr5 181099643 181099767 -21985765 + FRAM SINE Alu 10 128 -48 187 264 61 91 chr5 181099794 181100090 -21985442 - L2 LINE L2 -2895 419 133 2236 81 11 7 chr5 181100162 181100473 -21985059 - AluSp SINE Alu 0 312 1 408 221 41 14 chr5 181101106 181101224 -21984308 + MIR3 SINE MIR 60 183 -25 213 255 0 0 chr5 181101387 181101434 -21984098 + T-rich Low_complexity Low_complexity 1 47 0 884 188 73 51 chr5 181101461 181101652 -21983880 - MER58B DNA MER1_type -2093 327 129 2382 100 0 6 chr5 181101652 181101963 -21983569 - AluSq SINE Alu -4 309 1 884 188 73 51 chr5 181101963 181102005 -21983527 - MER58B DNA MER1_type -2291 129 89 905 146 0 7 chr5 181102009 181102146 -21983386 + AluJo SINE Alu 1 136 -176 193 237 34 17 chr5 181102161 181102220 -21983312 + MIR SINE MIR 149 208 -54 2445 83 3 0 chr5 181102652 181102952 -21982580 - AluSp SINE Alu -12 301 1 188 242 32 25 chr5 181102954 181103049 -21982483 - MIR SINE MIR -114 148 16 289 298 53 26 chr5 181103068 181103182 -21982350 + L2 LINE L2 2430 2546 -768 346 338 46 68 chr5 181103227 181103251 -21982281 + L2 LINE L2 2691 2714 -600 1711 114 100 21 chr5 181103251 181103532 -21982000 + AluY SINE Alu 1 303 -8 346 338 46 68 chr5 181103532 181103604 -21981928 + L2 LINE L2 2714 2786 -528 2324 95 0 3 chr5 181103604 181103899 -21981633 + AluSq SINE Alu 1 294 -19 346 338 46 68 chr5 181103899 181104020 -21981512 + L2 LINE L2 2786 2904 -410 21 0 0 0 chr5 181104020 181104041 -21981491 + AT_rich Low_complexity Low_complexity 1 21 0 473 164 0 106 chr5 181104041 181104100 -21981432 - FLAM_C SINE Alu -187 125 80 2418 77 0 37 chr5 181104100 181104423 -21981109 + AluY SINE Alu 1 311 0 473 164 0 106 chr5 181104423 181104467 -21981065 - FLAM_C SINE Alu -232 80 33 285 321 101 47 chr5 181104555 181104625 -21980907 + L2 LINE L2 3019 3084 -229 810 167 0 0 chr5 181104625 181104745 -21980787 - FLAM_A SINE Alu -13 120 1 285 321 101 47 chr5 181104745 181104951 -21980581 + L2 LINE L2 3084 3310 -3 260 234 129 40 chr5 181105008 181105132 -21980400 - L2 LINE L2 -6 3266 3132 1472 148 5 0 chr5 181105250 181105460 -21980072 + AluJo SINE Alu 2 212 -100 4536 117 184 102 chr5 181105467 181106890 -21978642 - pTR5 LTR ERV1 0 2438 743 584 152 0 0 chr5 181106890 181106989 -21978543 + AluJo SINE Alu 213 311 -1 325 234 0 0 chr5 181107306 181107370 -21978162 + L2 LINE L2 3249 3312 -1 2454 94 3 0 chr5 181107422 181107731 -21977801 + AluSx SINE Alu 1 310 -2 1504 200 51 3 chr5 181107865 181108160 -21977372 - AluJb SINE Alu -3 309 1 2469 76 0 3 chr5 181108988 181109292 -21976240 - AluY SINE Alu -8 303 1 275 250 0 0 chr5 181109506 181109570 -21975962 + MER91 DNA MER1_type 77 140 0 247 203 92 0 chr5 181109815 181109880 -21975652 + MIR SINE MIR 53 122 -107 751 156 192 0 chr5 181110001 181110168 -21975364 - MER20 DNA MER1_type -14 205 7 507 33 0 0 chr5 181110341 181110402 -21975130 + (TG)n Simple_repeat Simple_repeat 1 61 0 235 217 11 22 chr5 181110402 181110494 -21975038 + GA-rich Low_complexity Low_complexity 4 94 0 381 296 202 19 chr5 181110718 181111405 -21974127 + L2 LINE L2 2468 3313 0 344 269 241 0 chr5 181112505 181112650 -21972882 + MIR SINE MIR 46 225 -37 211 276 0 82 chr5 181112672 181112770 -21972762 - MIR SINE MIR -102 106 17 2498 78 0 3 chr5 181112825 181113132 -21972400 - AluSq SINE Alu -6 307 2 241 298 207 16 chr5 181113280 181113401 -21972131 + L1MC4a LINE L1 5509 5652 -2156 326 286 94 71 chr5 181113421 181113494 -21972038 + L1MC4a LINE L1 5940 6010 -1798 1856 168 0 7 chr5 181113494 181113792 -21971740 + AluJb SINE Alu 1 296 -16 326 286 94 71 chr5 181113792 181113942 -21971590 + L1MC4a LINE L1 6010 6168 -1640 223 343 14 0 chr5 181114048 181114118 -21971414 + CT-rich Low_complexity Low_complexity 2 72 0 232 75 19 57 chr5 181114169 181114185 -21971347 + (TTCA)n Simple_repeat Simple_repeat 1 16 -35 1955 164 3 3 chr5 181114185 181114484 -21971048 - AluJb SINE Alu -13 299 1 232 75 19 57 chr5 181114484 181114520 -21971012 + (TTCA)n Simple_repeat Simple_repeat 16 51 0 302 270 143 8 chr5 181114754 181114880 -21970652 - L1MC5 LINE L1 -36 7925 7783 448 171 34 96 chr5 181114884 181114935 -21970597 - LTR54B LTR ERV1 -2 496 443 2302 77 17 27 chr5 181114935 181115235 -21970297 + AluY SINE Alu 1 297 -14 448 171 34 96 chr5 181115235 181115329 -21970203 - LTR54B LTR ERV1 -55 443 360 2120 143 0 0 chr5 181115329 181115622 -21969910 - AluSq SINE Alu -20 293 1 400 171 12 0 chr5 181115622 181115704 -21969828 - Charlie8 DNA MER1_type -2259 158 76 477 255 215 15 chr5 181116815 181117015 -21968517 + MIR SINE MIR 10 249 -13 * 563 302 124 35 chr5 181117013 181117521 -21968011 - L2 LINE L2 0 3313 2745 224 360 44 15 chr5 181117866 181118002 -21967530 - L2 LINE L2 -46 3226 3087 182 299 24 79 chr5 181118050 181118111 -21967421 + L2 LINE L2 2832 2895 -377 2047 148 3 3 chr5 181118111 181118415 -21967117 - AluSx SINE Alu -8 304 1 182 299 24 79 chr5 181118415 181118517 -21967015 + L2 LINE L2 2895 2986 -286 2191 131 0 0 chr5 181118567 181118858 -21966674 - AluSx SINE Alu -21 291 1 2489 91 3 0 chr5 181118864 181119172 -21966360 - AluSp SINE Alu 0 313 5 598 192 0 0 chr5 181119239 181119343 -21966189 + FLAM_A SINE Alu 6 109 -33 2074 125 7 0 chr5 181119345 181119666 -21965866 - AluSq SINE Alu 0 323 1 1679 136 0 52 chr5 181119672 181119980 -21965552 - AluSg SINE Alu 0 310 19 247 191 0 0 chr5 181120337 181120379 -21965153 + MER30 DNA MER1_type 189 230 0 1991 197 81 14 chr5 181120436 181120882 -21964650 - MLT2B1 LTR ERVL -44 476 1 614 223 29 85 chr5 181120883 181120975 -21964557 + MLT1E LTR MaLR 334 430 -122 2329 101 0 3 chr5 181120975 181121273 -21964259 + AluY SINE Alu 2 298 -13 614 223 29 85 chr5 181121273 181121385 -21964147 + MLT1E LTR MaLR 430 552 0 931 169 31 92 chr5 181121389 181121633 -21963899 - L1ME3A LINE L1 -27 6143 5914 2115 133 0 23 chr5 181121633 181121933 -21963599 + AluSx SINE Alu 1 293 -19 931 169 31 92 chr5 181121933 181121948 -21963584 - L1ME3A LINE L1 -256 5914 5900 2430 109 0 0 chr5 181122130 181122442 -21963090 - AluSx SINE Alu 0 312 1 2329 125 0 0 chr5 181122828 181123140 -21962392 + AluSx SINE Alu 1 312 0 2062 149 0 7 chr5 181123170 181123471 -21962061 + AluSx SINE Alu 1 299 -13 199 212 242 0 chr5 181123494 181123560 -21961972 - MIR SINE MIR -98 164 83 2446 54 0 0 chr5 181123607 181123958 -21961574 - AluY SINE Alu 0 352 2 2221 94 52 0 chr5 181123962 181124248 -21961284 - AluSx SINE Alu -11 301 1 2260 97 17 10 chr5 181124248 181124545 -21960987 - AluSq SINE Alu -13 300 1 1745 171 64 0 chr5 181124545 181124824 -21960708 - AluJb SINE Alu -14 298 1 238 220 11 11 chr5 181124952 181125043 -21960489 + (TCCA)n Simple_repeat Simple_repeat 1 91 0 889 211 6 0 chr5 181125178 181125339 -21960193 - FRAM SINE Alu -14 162 1 788 316 49 31 chr5 181125407 181125860 -21959672 + L2 LINE L2 2806 3266 -47 321 89 0 0 chr5 181125864 181125909 -21959623 - AluJ/FLAM SINE Alu -203 99 60 2340 119 0 3 chr5 181125981 181126291 -21959241 - AluSx SINE Alu -3 309 1 183 80 0 0 chr5 181126309 181126334 -21959198 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2023 142 7 3 chr5 181126900 181127209 -21958323 - AluSq SINE Alu -3 310 1 992 155 44 5 chr5 181127209 181127528 -21958004 - LTR54B LTR ERV1 -123 387 2 658 242 0 0 chr5 181127541 181127669 -21957863 - FLAM_A SINE Alu -5 128 1 310 141 0 109 chr5 181127677 181127707 -21957825 - L1MC5 LINE L1 -182 7779 7747 2320 113 3 0 chr5 181127707 181128008 -21957524 - AluSq SINE Alu -11 302 1 310 141 0 109 chr5 181128008 181128069 -21957463 - L1MC5 LINE L1 -214 7747 7698 254 154 0 0 chr5 181128074 181128113 -21957419 + AluSg/x SINE Alu 211 249 -53 921 161 25 83 chr5 181128114 181128356 -21957176 + AluJo SINE Alu 85 312 0 2279 93 0 29 chr5 181128487 181128798 -21956734 - AluSq SINE Alu -11 302 1 655 131 0 0 chr5 181129249 181129348 -21956184 + AluSg/x SINE Alu 205 303 -7 637 288 64 27 chr5 181129513 181129808 -21955724 + MLT1L LTR MaLR 86 391 -224 241 65 87 0 chr5 181129959 181130005 -21955527 + T-rich Low_complexity Low_complexity 3 52 0 2059 113 20 10 chr5 181130160 181130461 -21955071 + AluSg SINE Alu 1 304 -6 340 258 47 47 chr5 181131545 181131733 -21953799 + L1ME4a LINE L1 5852 6042 -79 2470 83 0 0 chr5 181131733 181132033 -21953499 - AluSq SINE Alu -13 300 1 340 258 47 47 chr5 181132033 181132100 -21953432 + L1ME4a LINE L1 6041 6107 -14 1646 203 17 0 chr5 181132170 181132465 -21953067 + AluJo SINE Alu 1 300 -12 1524 179 84 60 chr5 181132478 181132656 -21952876 + MSTC LTR MaLR 1 173 -255 1031 189 118 68 chr5 181132656 181132775 -21952757 + AluJo SINE Alu 2 114 -188 2254 110 7 7 chr5 181132775 181133084 -21952448 - AluSg SINE Alu 0 310 2 1031 189 118 68 chr5 181133084 181133244 -21952288 + AluJo SINE Alu 114 295 -7 1930 151 6 22 chr5 181133244 181133555 -21951977 + AluJb SINE Alu 1 306 -6 1524 179 84 60 chr5 181133555 181133727 -21951805 + MSTC LTR MaLR 173 366 -62 808 150 0 8 chr5 181133727 181133860 -21951672 - FLAM_C SINE Alu -1 132 1 1524 179 84 60 chr5 181133860 181133925 -21951607 + MSTC LTR MaLR 366 428 0 385 278 76 29 chr5 181134191 181134374 -21951158 + MIR3 SINE MIR 2 196 -66 525 327 24 14 chr5 181135374 181135582 -21949950 - MIR SINE MIR -2 260 51 1655 138 21 103 chr5 181135990 181136166 -21949366 - AluYb8 SINE Alu -6 312 123 2166 125 0 0 chr5 181136166 181136463 -21949069 - AluY SINE Alu -14 297 1 1655 138 21 103 chr5 181136463 181136477 -21949055 - AluYb8 SINE Alu -195 123 109 2396 86 0 3 chr5 181136477 181136778 -21948754 - AluY SINE Alu -11 300 1 1655 138 21 103 chr5 181136778 181136926 -21948606 - AluYb8 SINE Alu -209 109 1 536 283 121 37 chr5 181137326 181137648 -21947884 + LTR67 LTR ERVL 200 548 -9 357 121 12 72 chr5 181137955 181138038 -21947494 - MER116 DNA Mariner 0 80 3 665 24 12 0 chr5 181138099 181138182 -21947350 + (TTTC)n Simple_repeat Simple_repeat 3 86 0 1870 174 0 3 chr5 181138186 181138474 -21947058 - AluJo SINE Alu -25 287 1 639 158 63 16 chr5 181138488 181138615 -21946917 - FLAM_C SINE Alu 0 133 1 733 158 8 0 chr5 181138681 181138824 -21946708 + FLAM_C SINE Alu 1 144 0 372 276 0 0 chr5 181139150 181139237 -21946295 + L1ME LINE L1 5738 5824 -297 2407 90 3 0 chr5 181139240 181139540 -21945992 + AluSq SINE Alu 1 301 -12 972 208 12 0 chr5 181139550 181139723 -21945809 + AluJb SINE Alu 137 311 -1 1753 183 3 19 chr5 181140490 181140807 -21944725 - AluJo SINE Alu 0 312 1 1214 202 71 25 chr5 181140809 181141091 -21944441 - AluJo SINE Alu -17 295 1 800 234 6 6 chr5 181141092 181141267 -21944265 - MIR SINE MIR -68 194 20 2334 107 0 0 chr5 181141326 181141625 -21943907 - AluSx SINE Alu -13 299 1 1441 167 0 9 chr5 181141625 181141858 -21943674 - AluJo SINE Alu -14 298 68 510 200 32 17 chr5 181142659 181142793 -21942739 + MER5A DNA MER1_type 7 151 -38 211 253 74 21 chr5 181143095 181143190 -21942342 - MIR SINE MIR -34 228 129 1408 165 62 0 chr5 181143194 181143437 -21942095 + AluJb SINE Alu 1 258 -54 1844 102 8 4 chr5 181193437 181193693 -21891839 - AluSg SINE Alu -53 257 1 671 325 13 8 chr5 181193721 181193958 -21891574 + MIR SINE MIR 4 241 -21 2262 89 3 0 chr5 181194006 181194308 -21891224 + AluSg SINE Alu 1 303 -7 366 313 0 10 chr5 181194309 181194408 -21891124 - MIR SINE MIR -131 131 34 2877 121 8 59 chr5 181194430 181194839 -21890693 + MER83 LTR ERV1 1 384 -64 2243 100 0 0 chr5 181194839 181195138 -21890394 - AluSx SINE Alu -13 299 1 2877 121 8 59 chr5 181195138 181195200 -21890332 + MER83 LTR ERV1 384 448 0 562 312 117 0 chr5 181195418 181195623 -21889909 - MIR SINE MIR -21 241 13 620 273 59 0 chr5 181195699 181195886 -21889646 - Charlie8 DNA MER1_type -2183 234 37 211 208 0 21 chr5 181196168 181196216 -21889316 + CT-rich Low_complexity Low_complexity 2 48 0 996 206 110 48 chr5 181196290 181196428 -21889104 - MLT1A1 LTR MaLR -53 312 184 2140 110 3 3 chr5 181196428 181196727 -21888805 - AluSx SINE Alu -13 299 1 996 206 110 48 chr5 181196727 181196879 -21888653 - MLT1A1 LTR MaLR -181 184 4 278 319 78 0 chr5 181196914 181197030 -21888502 - MIR SINE MIR -63 145 21 1853 127 13 41 chr5 181197102 181197417 -21888115 + AluSq SINE Alu 3 308 -5 214 301 0 14 chr5 181197747 181197820 -21887712 + (CA)n Simple_repeat Simple_repeat 1 72 0 244 274 0 0 chr5 181198532 181198583 -21886949 + L2 LINE L2 3136 3186 -86 455 245 113 0 chr5 181198639 181198745 -21886787 + MIR SINE MIR 83 200 -62 188 273 0 0 chr5 181198868 181198912 -21886620 - MIR SINE MIR -71 137 94 252 149 0 0 chr5 181199875 181199922 -21885610 + MER117 DNA MER1_type 57 103 -94 777 239 144 37 chr5 181199999 181200042 -21885490 + MER113 DNA MER1_type? 47 84 -437 2286 91 3 0 chr5 181200042 181200339 -21885193 - AluSp SINE Alu -15 298 1 777 239 144 37 chr5 181200339 181200643 -21884889 + MER113 DNA MER1_type? 84 431 -90 251 140 20 0 chr5 181201145 181201195 -21884337 + GA-rich Low_complexity Low_complexity 1 51 0 1865 126 35 3 chr5 181201269 181201555 -21883977 - AluSc SINE Alu -14 295 1 459 246 37 37 chr5 181201590 181201724 -21883808 - MIR3 SINE MIR -3 205 72 1635 153 43 7 chr5 181201895 181202177 -21883355 + AluJo SINE Alu 1 292 -20 2231 103 3 0 chr5 181202184 181202484 -21883048 + AluSx SINE Alu 1 301 -11 592 284 6 27 chr5 181202485 181202668 -21882864 + MIR SINE MIR 21 199 -63 263 176 206 35 chr5 181202729 181202842 -21882690 + MIR SINE MIR 65 144 -64 1522 150 12 4 chr5 181202857 181203110 -21882422 + AluJb SINE Alu 37 291 -21 1744 154 0 7 chr5 181203369 181203701 -21881831 + AluJb SINE Alu 1 330 0 330 255 26 72 chr5 181203839 181203992 -21881540 + MIR SINE MIR 94 239 -23 2287 60 16 38 chr5 181204017 181204335 -21881197 - AluY SINE Alu 0 311 1 470 248 38 15 chr5 181204525 181204658 -21880874 - MIR3 SINE MIR -35 173 38 2208 92 10 3 chr5 181205017 181205320 -21880212 - AluSq SINE Alu -8 305 1 2281 90 0 3 chr5 181205486 181205798 -21879734 + AluY SINE Alu 1 311 0 237 301 7 131 chr5 181205809 181205962 -21879570 + MER102a DNA MER1_type 196 329 -1 611 303 118 5 chr5 181206547 181206768 -21878764 + MIR SINE MIR 16 261 -1 187 280 267 13 chr5 181206843 181206977 -21878555 - L2 LINE L2 -136 3177 3000 1171 184 33 0 chr5 181206977 181207189 -21878343 - MER20 DNA MER1_type 0 219 1 187 280 267 13 chr5 181207189 181207204 -21878328 - L2 LINE L2 -313 3000 2990 1945 147 7 0 chr5 181207208 181207514 -21878018 + AluSx SINE Alu 1 308 0 2248 110 3 0 chr5 181208029 181208321 -21877211 + AluSx SINE Alu 7 299 -13 2301 119 3 0 chr5 181209169 181209480 -21876052 + AluSx SINE Alu 1 312 0 2086 149 0 10 chr5 181209887 181210231 -21875301 + AluJb SINE Alu 1 312 0 196 238 0 0 chr5 181210359 181210401 -21875131 + MER5A DNA MER1_type 148 189 0 234 241 58 81 chr5 181210600 181210687 -21874845 - MIR3 SINE MIR -35 173 89 404 221 50 66 chr5 181211057 181211238 -21874294 + MER104 DNA MER2_type 1 178 -2 486 252 44 22 chr5 181211269 181211404 -21874128 - MIR SINE MIR -55 207 70 2543 140 50 5 chr5 181211404 181211840 -21873692 + MLT2C2 LTR ERVL 1 456 -8 201 333 95 0 chr5 181214654 181214759 -21870773 + MIR3 SINE MIR 53 167 -41 2439 71 0 0 chr5 181215439 181215744 -21869788 + AluSg SINE Alu 1 305 0 2043 154 0 0 chr5 181216300 181216593 -21868939 - AluJb SINE Alu -17 295 3 243 219 83 62 chr5 181216734 181216830 -21868702 + MIR SINE MIR 151 248 -14 * 294 200 0 0 chr5 181216797 181216847 -21868685 + L2 LINE L2 3261 3310 -3 2261 77 3 7 chr5 181217043 181217329 -21868203 + AluSg SINE Alu 2 286 -24 438 122 14 27 chr5 181217594 181217668 -21867864 + AluJo/FLAM SINE Alu 61 133 -179 2523 77 0 0 chr5 181217671 181217981 -21867551 + AluY SINE Alu 1 310 -1 882 128 0 8 chr5 181218009 181218142 -21867390 + FLAM_C SINE Alu 2 133 0 455 290 80 19 chr5 181218149 181218311 -21867221 + MIR SINE MIR 83 254 -8 2350 108 3 0 chr5 181218326 181218623 -21866909 - AluSq SINE Alu -15 298 1 1943 101 45 4 chr5 181219194 181219461 -21866071 - AluSc SINE Alu -31 278 1 550 301 84 23 chr5 181220368 181220597 -21864935 + MIR SINE MIR 5 246 -16 802 239 73 0 chr5 181220821 181221055 -21864477 - LTR16C LTR ERVL -64 427 177 211 330 0 21 chr5 181221218 181221312 -21864220 + L2 LINE L2 2919 3010 -262 565 286 8 0 chr5 181222304 181222423 -21863109 + L2 LINE L2 3153 3272 0 21 0 0 0 chr5 181222537 181222558 -21862974 + AT_rich Low_complexity Low_complexity 1 21 0 1440 267 99 29 chr5 181223518 181224420 -21861112 - L1MC4 LINE L1 0 8042 6952 1564 171 75 7 chr5 181224421 181224702 -21860830 - AluJb SINE Alu -12 300 1 982 148 66 45 chr5 181225025 181225268 -21860264 - L1MB3 LINE L1 0 6183 5936 248 237 10 72 chr5 181225392 181225489 -21860043 - L1MC5 LINE L1 -38 7923 7833 2143 122 10 7 chr5 181225833 181226127 -21859405 + AluSg SINE Alu 1 295 -15 1612 92 18 26 chr5 181226136 181226365 -21859167 + AluSg/x SINE Alu 85 311 -1 274 185 12 74 chr5 181227562 181227643 -21857889 + L2 LINE L2 3189 3264 -49 318 252 185 7 chr5 181227750 181227885 -21857647 - MIR SINE MIR -70 192 34 270 290 16 65 chr5 181227873 181227997 -21857535 + L2 LINE L2 3155 3272 0 * 892 157 8 0 chr5 181228205 181228339 -21857193 - AluJo SINE Alu -177 135 1 508 222 140 53 chr5 181228759 181228966 -21856566 + MIR SINE MIR 21 245 -17 547 283 28 17 chr5 181230342 181230506 -21855026 + MIR SINE MIR 71 239 -23 1455 154 121 25 chr5 181230506 181230641 -21854891 + AluJb SINE Alu 1 122 -190 2222 119 0 0 chr5 181230641 181230935 -21854597 + AluSx SINE Alu 3 296 -16 1455 154 121 25 chr5 181230935 181231079 -21854453 + AluJb SINE Alu 122 307 -5 547 283 28 17 chr5 181231079 181231094 -21854438 + MIR SINE MIR 239 252 -10 356 258 52 0 chr5 181231164 181231261 -21854271 + L1ME4a LINE L1 6017 6118 -3 25 0 0 0 chr5 181231834 181231859 -21853673 + AT_rich Low_complexity Low_complexity 1 25 0 257 108 0 0 chr5 181233119 181233156 -21852376 - tRNA-Gly-GGA tRNA tRNA -38 37 1 525 299 60 17 chr5 181233234 181233508 -21852024 + L1MC4a LINE L1 5562 5819 -302 2563 226 83 7 chr5 181233580 181234121 -21851411 + MER82 DNA MER2_type 3 596 -57 2444 85 0 7 chr5 181234121 181234427 -21851105 - AluSx SINE Alu -8 304 1 2563 226 83 7 chr5 181234427 181234490 -21851042 + MER82 DNA MER2_type 596 653 0 2253 128 0 0 chr5 181234655 181234951 -21850581 + AluSx SINE Alu 1 296 -16 2235 113 0 3 chr5 181235564 181235864 -21849668 - AluSx SINE Alu -13 299 1 1070 159 0 0 chr5 181235959 181236129 -21849403 - AluJb SINE Alu -9 303 134 1974 319 63 19 chr5 181236354 181236590 -21848942 + L1MB5 LINE L1 5585 5809 -365 1445 151 10 85 chr5 181236590 181236895 -21848637 + AluSq SINE Alu 1 282 -31 1974 319 63 19 chr5 181236895 181237200 -21848332 + L1MB5 LINE L1 5809 6150 -24 2119 133 0 29 chr5 181237207 181237523 -21848009 - AluSx SINE Alu -3 309 3 234 323 158 0 chr5 181237599 181237726 -21847806 + MIR SINE MIR 91 237 -25 2200 97 10 36 chr5 181238177 181238346 -21847186 - AluSq SINE Alu -12 301 142 1874 117 4 0 chr5 181238346 181238594 -21846938 - AluSp SINE Alu -19 294 46 2200 97 10 36 chr5 181238594 181238733 -21846799 - AluSq SINE Alu -171 142 1 198 170 21 21 chr5 181239879 181239926 -21845606 - L2 LINE L2 -1 3312 3266 367 291 296 0 chr5 181240104 181240327 -21845205 - L2 LINE L2 -337 2977 2689 572 300 100 18 chr5 181240583 181240803 -21844729 + MIR SINE MIR 16 253 -9 419 176 176 20 chr5 181241715 181241868 -21843664 - L1MC4 LINE L1 -6 8036 7860 1687 167 0 21 chr5 181242074 181242389 -21843143 - AluJo SINE Alu 0 309 1 207 0 0 0 chr5 181242634 181242657 -21842875 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 252 329 0 14 chr5 181242663 181242736 -21842796 - L2 LINE L2 0 3313 3242 4253 173 40 42 chr5 181242745 181243400 -21842132 + L1MB7 LINE L1 4992 5647 -537 564 15 0 0 chr5 181243400 181243465 -21842067 + (TA)n Simple_repeat Simple_repeat 1 65 0 4253 173 40 42 chr5 181243465 181243922 -21841610 + L1MB7 LINE L1 5647 6104 -80 4057 70 20 0 chr5 181243922 181244480 -21841052 - L1MA1 LINE L1 0 6302 5734 4253 173 40 42 chr5 181244480 181244507 -21841025 + L1MB7 LINE L1 6104 6130 -54 1989 167 0 0 chr5 181244507 181244813 -21840719 + AluJb SINE Alu 1 306 -6 4253 173 40 42 chr5 181244813 181244865 -21840667 + L1MB7 LINE L1 6130 6184 0 203 327 19 117 chr5 181244865 181245070 -21840462 - L2 LINE L2 -78 3194 3010 23 0 0 0 chr5 181245345 181245368 -21840164 + AT_rich Low_complexity Low_complexity 1 23 0 1593 136 139 0 chr5 181245380 181245631 -21839901 + AluSx SINE Alu 1 286 -16 263 277 51 79 chr5 181245691 181245868 -21839664 + L2 LINE L2 3141 3312 -1 2120 139 13 7 chr5 181246797 181247107 -21838425 + AluSx SINE Alu 1 312 0 195 284 92 73 chr5 181247230 181247339 -21838193 + L2 LINE L2 2976 3086 -186 191 208 0 57 chr5 181247376 181247429 -21838103 + L2 LINE L2 3264 3313 0 301 293 160 9 chr5 181247501 181247607 -21837925 + MIR SINE MIR 26 147 -115 24 0 0 0 chr5 181248546 181248570 -21836962 + AT_rich Low_complexity Low_complexity 1 24 0 209 194 0 0 chr5 181248942 181248978 -21836554 + T-rich Low_complexity Low_complexity 5 40 0 1828 65 157 8 chr5 181249027 181249288 -21836244 + AluY SINE Alu 2 301 0 247 193 96 36 chr5 181249506 181249589 -21835943 + L2 LINE L2 2974 3061 -252 374 300 76 63 chr5 181250655 181250692 -21834840 + L2 LINE L2 2997 3032 -240 2314 93 10 13 chr5 181250692 181251005 -21834527 - AluSq SINE Alu -1 312 1 374 300 76 63 chr5 181251005 181251190 -21834342 + L2 LINE L2 3032 3222 -50 727 136 88 24 chr5 181251364 181251541 -21833991 + FLAM_C SINE Alu 1 185 0 1135 194 0 0 chr5 181252330 181252521 -21833011 + 7SLRNA srpRNA srpRNA 130 320 0 314 236 0 138 chr5 181252725 181252777 -21832755 + L1MC4 LINE L1 6614 6641 -1401 1860 167 11 0 chr5 181252777 181253059 -21832473 + AluJo SINE Alu 1 285 -27 314 236 0 138 chr5 181253059 181253129 -21832403 + L1MC4 LINE L1 6641 6719 -1323 451 280 129 0 chr5 181253367 181253499 -21832033 - MIR SINE MIR -106 156 8 2051 92 50 28 chr5 181253574 181253856 -21831676 + AluSx SINE Alu 1 288 -24 375 308 59 41 chr5 181253873 181254042 -21831490 - L1ME4a LINE L1 0 6121 5950 326 280 133 0 chr5 181254093 181254236 -21831296 - MIR SINE MIR -49 213 52 1328 206 78 78 chr5 181255572 181255646 -21829886 + MLT1C LTR MaLR 6 79 -388 2254 86 7 7 chr5 181255646 181255948 -21829584 + AluSc SINE Alu 1 302 -7 1328 206 78 78 chr5 181255948 181256335 -21829197 + MLT1C LTR MaLR 78 467 0 293 260 13 39 chr5 181256350 181256427 -21829105 + MER5A DNA MER1_type 92 166 -23 236 232 61 24 chr5 181256481 181256563 -21828969 + L2 LINE L2 3229 3313 0 303 306 10 0 chr5 181257212 181257310 -21828222 + L2 LINE L2 2968 3066 -206 498 290 196 0 chr5 181257323 181257537 -21827995 + MIR SINE MIR 7 262 0 843 146 7 36 chr5 181257970 181258107 -21827425 + FLAM_C SINE Alu 1 133 0 391 224 103 0 chr5 181258122 181258238 -21827294 + L1MC4 LINE L1 7826 7953 -89 276 160 0 0 chr5 181258246 181258296 -21827236 + L1MC4 LINE L1 7993 8042 0 1062 121 6 0 chr5 181258651 181258808 -21826724 + AluSg/x SINE Alu 137 294 -18 251 347 129 24 chr5 181258889 181259137 -21826395 - L2 LINE L2 -12 3301 3028 231 262 19 37 chr5 181259240 181259347 -21826185 + L1MC5 LINE L1 7377 7481 -480 957 174 0 0 chr5 181259410 181259586 -21825946 - AluJb SINE Alu 0 306 131 2095 99 3 7 chr5 181259595 181259889 -21825643 - AluSq SINE Alu -20 293 1 340 206 202 49 chr5 181259889 181260112 -21825420 + L1MC5 LINE L1 7506 7762 -199 298 232 67 13 chr5 181260123 181260216 -21825316 + L1MC5 LINE L1 7844 8042 0 1466 123 45 0 chr5 181260868 181261088 -21824444 - MER30 DNA MER1_type 0 230 1 656 194 0 0 chr5 181261154 181261262 -21824270 - FRAM SINE Alu -69 107 1 1731 223 53 64 chr5 181261329 181261875 -21823657 + L1ME2 LINE L1 5479 6030 -134 2029 114 3 14 chr5 181261875 181262172 -21823360 - AluSg SINE Alu -16 294 1 2242 82 7 0 chr5 181262175 181262467 -21823065 - AluSx SINE Alu -18 294 1 1731 223 53 64 chr5 181262467 181262598 -21822934 + L1ME2 LINE L1 6032 6164 0 425 275 193 5 chr5 181262613 181262820 -21822712 + L1ME4a LINE L1 5740 5985 -136 195 267 0 0 chr5 181262825 181262870 -21822662 - L2 LINE L2 0 3313 3269 2126 135 0 0 chr5 181262967 181263279 -21822253 + AluSx SINE Alu 1 312 0 2167 125 0 0 chr5 181263632 181263943 -21821589 - AluSq SINE Alu -2 311 1 246 182 10 121 chr5 181264022 181264121 -21821411 + HAL1b LINE L1 1227 1314 -34 462 18 0 0 chr5 181264130 181264185 -21821347 + (TG)n Simple_repeat Simple_repeat 2 56 0 2143 100 0 7 chr5 181265254 181265553 -21819979 - AluSc SINE Alu -12 297 1 431 283 76 20 chr5 181266124 181266322 -21819210 + MIR SINE MIR 50 260 -2 2233 93 10 0 chr5 181266431 181266732 -21818800 + AluSx SINE Alu 1 304 -8 238 286 122 0 chr5 181267648 181267746 -21817786 - L2 LINE L2 -24 3248 3139 806 267 147 29 chr5 181268803 181268915 -21816617 - L2 LINE L2 -50 3263 3166 2002 94 9 41 chr5 181268915 181269234 -21816298 + AluSg SINE Alu 1 309 -1 806 267 147 29 chr5 181269234 181269639 -21815893 - L2 LINE L2 -147 3166 2658 1632 211 101 21 chr5 181271041 181271459 -21814073 + MLT1C LTR MaLR 17 467 0 26 0 0 0 chr5 181272492 181272518 -21813014 + GC_rich Low_complexity Low_complexity 1 26 0 33 0 0 0 chr5 181273065 181273098 -21812434 + GC_rich Low_complexity Low_complexity 1 33 0 192 216 0 0 chr5 181273356 181273407 -21812125 + T-rich Low_complexity Low_complexity 1 51 0 356 299 140 0 chr5 181273766 181273923 -21811609 + MIR SINE MIR 70 248 -14 516 320 174 54 chr5 181274063 181274324 -21811208 + L1ME4a LINE L1 4396 4624 -1522 2174 101 0 7 chr5 181274324 181274631 -21810901 + AluSq SINE Alu 1 305 -8 516 320 174 54 chr5 181274631 181275240 -21810292 + L1ME4a LINE L1 4624 5371 -775 232 234 0 0 chr5 181275344 181275391 -21810141 + L1ME4a LINE L1 5529 5575 -546 22 0 0 0 chr5 181275601 181275623 -21809909 + AT_rich Low_complexity Low_complexity 1 22 0 1408 220 26 0 chr5 181275633 181275758 -21809774 + AluJo SINE Alu 1 121 -191 360 0 0 0 chr5 181275758 181275798 -21809734 + (CA)n Simple_repeat Simple_repeat 2 41 0 1408 220 26 0 chr5 181275798 181275976 -21809556 + AluJo SINE Alu 121 312 0 471 188 38 8 chr5 181276057 181276190 -21809342 + L1ME4a LINE L1 5984 6120 -1 245 246 33 0 chr5 181277118 181277179 -21808353 - L1MC4a LINE L1 -1869 5939 5877 3468 196 44 23 chr5 181277851 181278152 -21807380 + MER45B DNA AcHobo 111 404 -1177 1722 201 32 49 chr5 181278152 181278445 -21807087 - MLT1C LTR MaLR -2 465 182 2307 97 3 0 chr5 181278445 181278756 -21806776 - AluSx SINE Alu 0 312 1 1722 201 32 49 chr5 181278756 181278935 -21806597 - MLT1C LTR MaLR -285 182 1 3468 196 44 23 chr5 181278935 181279402 -21806130 + MER45B DNA AcHobo 404 895 -145 949 176 0 29 chr5 181279549 181279719 -21805813 - FRAM SINE Alu -1 165 1 353 308 54 15 chr5 181279953 181280083 -21805449 + L2 LINE L2 3137 3271 -1 1057 162 100 59 chr5 181280088 181280396 -21805136 + AluJb SINE Alu 1 319 0 209 392 40 0 chr5 181280507 181280632 -21804900 + MIR SINE MIR 82 211 -51 294 301 43 0 chr5 181280714 181280807 -21804725 + MIR3 SINE MIR 64 160 -48 429 309 96 48 chr5 181280871 181281185 -21804347 - Charlie8 DNA MER1_type -2004 413 85 998 106 11 17 chr5 181281196 181281375 -21804157 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 200 143 24 0 chr5 181281376 181281418 -21804114 + CT-rich Low_complexity Low_complexity 1 43 0 582 86 0 0 chr5 181281518 181281599 -21803933 + (TTTC)n Simple_repeat Simple_repeat 3 83 0 481 78 39 38 chr5 181282138 181282343 -21803189 + AluSg SINE Alu 1 286 -24 893 256 41 0 chr5 181282454 181282700 -21802832 - L2 LINE L2 -662 2652 2397 459 292 67 45 chr5 181282800 181282978 -21802554 + MIR SINE MIR 41 222 -40 579 246 24 153 chr5 181283003 181283104 -21802428 - L1ME4a LINE L1 -198 5923 5811 2089 104 0 22 chr5 181283104 181283421 -21802111 + AluSg SINE Alu 1 310 0 2187 91 0 7 chr5 181283431 181283729 -21801803 + AluSg SINE Alu 1 296 -14 579 246 24 153 chr5 181283729 181283741 -21801791 - L1ME4a LINE L1 -320 5801 5789 716 214 0 0 chr5 181283741 181283872 -21801660 - FLAM_A SINE Alu -2 131 1 579 246 24 153 chr5 181283872 181284113 -21801419 - L1ME4a LINE L1 -332 5789 5627 1711 245 44 42 chr5 181284113 181284632 -21800900 + MLT2B1 LTR ERVL 1 520 0 579 246 24 153 chr5 181284632 181284728 -21800804 - L1ME4a LINE L1 -494 5627 5520 2312 97 0 0 chr5 181284769 181285078 -21800454 + AluSq SINE Alu 1 309 -4 529 250 51 6 chr5 181285466 181285622 -21799910 + MIR3 SINE MIR 40 202 -6 300 203 0 54 chr5 181286188 181286262 -21799270 + Charlie8 DNA MER1_type 103 172 -2245 1087 210 28 0 chr5 181286279 181286493 -21799039 + MER58A DNA MER1_type 5 224 0 2010 103 0 37 chr5 181286688 181286988 -21798544 + AluSx SINE Alu 18 306 -6 339 134 0 175 chr5 181388087 181388184 -21697348 - MER116 DNA Mariner 0 80 1 24 32 0 0 chr5 181388265 181388296 -21697236 + AT_rich Low_complexity Low_complexity 1 31 0 492 270 103 5 chr5 181388688 181388873 -21696659 + MIR SINE MIR 52 254 -8 351 277 168 15 chr5 181389011 181389148 -21696384 - MIR3 SINE MIR -39 169 12 415 205 171 8 chr5 181389192 181389309 -21696223 + MIR SINE MIR 47 182 -80 2285 105 0 0 chr5 181389760 181390055 -21695477 + AluSx SINE Alu 1 295 -17 262 303 61 40 chr5 181390262 181390361 -21695171 - MIR3 SINE MIR -103 105 5 31423 167 5 12 chr5 181390474 181395471 -21690061 + HERVL18 LTR ERVL 902 5865 -182 18652 59 4 3 chr5 181395573 181398572 -21686960 - L1PA6 LINE L1 -144 6010 3007 1255 151 40 13 chr5 181399161 181399386 -21686146 + L1PA16 LINE L1 5927 6157 -9 181 302 48 0 chr5 181399559 181399622 -21685910 - L2 LINE L2 -2 3311 3246 278 300 206 12 chr5 181399946 181400286 -21685246 + L1ME4a LINE L1 5386 5791 -330 378 265 37 25 chr5 181400376 181400538 -21684994 + L1ME4a LINE L1 5955 6118 -3 2416 146 29 9 chr5 181400799 181401149 -21684383 + LTR18A LTR ERVL 1 357 0 2859 179 11 19 chr5 181401165 181401769 -21683763 + HERVL18 LTR ERVL 12 671 -5376 2654 76 108 0 chr5 181401872 181402241 -21683291 + MLT2A1 LTR ERVL 23 431 -13 2012 185 27 0 chr5 181402241 181402609 -21682923 + L1 LINE L1 4074 4451 -1695 272 138 46 18 chr5 181402618 181402727 -21682805 + (TA)n Simple_repeat Simple_repeat 1 112 0 951 184 0 25 chr5 181402754 181402955 -21682577 - L1 LINE L1 -2382 3764 3569 450 0 0 0 chr5 181402955 181403005 -21682527 + (TA)n Simple_repeat Simple_repeat 1 50 0 392 91 0 0 chr5 181403024 181403079 -21682453 + MLT2A1 LTR ERVL 390 444 0 13058 200 20 43 chr5 181403080 181407265 -21678267 - L1 LINE L1 -743 6105 1752 336 380 47 29 chr5 181407386 181407557 -21677975 + L2 LINE L2 3025 3198 -74 2332 168 39 5 chr5 181407663 181408098 -21677434 - L1MB5 LINE L1 0 6174 5725 1106 176 33 9 chr5 181408098 181408308 -21677224 - AluJo SINE Alu -12 300 86 485 245 61 27 chr5 181408310 181408372 -21677160 - L1MB5 LINE L1 -430 5744 5686 291 114 0 0 chr5 181408372 181408416 -21677116 + (TG)n Simple_repeat Simple_repeat 2 45 0 485 245 61 27 chr5 181408416 181408500 -21677032 - L1MB5 LINE L1 -488 5686 5593 1942 132 63 0 chr5 181408834 181409121 -21676411 - AluSx SINE Alu -7 305 1 213 288 182 8 chr5 181409241 181409373 -21676159 + MIR SINE MIR 92 246 -16 331 241 106 77 chr5 181409532 181409739 -21675793 + L2 LINE L2 2737 2949 -365 12846 106 7 12 chr5 181410130 181412208 -21673324 + L1P3 LINE L1 3 2072 -4389 732 211 0 19 chr5 181412315 181412499 -21673033 + ALR/Alpha Satellite centromeric 1 187 -404 2239 91 0 3 chr5 181412499 181412786 -21672746 + L1PA7 LINE L1 5866 6151 -3 732 211 0 19 chr5 181412786 181412885 -21672647 + ALR/Alpha Satellite centromeric 187 559 -32 2713 82 37 24 chr5 181413225 181413604 -21671928 + MLT2A1 LTR ERVL 61 444 0 42574 75 15 8 chr5 181413604 181414246 -21671286 + HERVL-A1 LTR ERVL 1 637 -5017 207 0 0 0 chr5 181414246 181414269 -21671263 + (TTA)n Simple_repeat Simple_repeat 2 24 0 42574 75 15 8 chr5 181414269 181418443 -21667089 + HERVL-A1 LTR ERVL 637 4861 -793 2425 8 4 0 chr5 181418443 181418706 -21666826 - AluYa5 SINE Alu -4 307 44 42574 75 15 8 chr5 181418706 181419343 -21666189 + HERVL-A1 LTR ERVL 4861 5492 -162 7120 72 6 4 chr5 181419344 181420586 -21664946 - L1PA7 LINE L1 -3 6151 4906 1920 117 0 0 chr5 181420590 181420871 -21664661 + L1PA7 LINE L1 4639 4919 -1227 * 5332 117 19 4 chr5 181420864 181421648 -21663884 - L1P3 LINE L1 -5658 803 8 361 39 0 0 chr5 181421654 181421706 -21663826 + HERVL LTR ERVL 5480 5531 -123 1872 10 0 5 chr5 181421806 181422012 -21663520 - AluYa5 SINE Alu -106 205 1 1445 261 15 15 chr5 181422012 181422407 -21663125 - L1M2 LINE L1 -5097 2112 1718 2220 245 75 40 chr5 181422468 181423081 -21662451 - L1M2 LINE L1 -6392 817 170 2391 149 68 24 chr5 181423081 181423491 -21662041 + MSTA LTR MaLR 1 428 0 2220 245 75 40 chr5 181423491 181423653 -21661879 - L1M2 LINE L1 -7039 170 15 1736 177 58 0 chr5 181423820 181424114 -21661418 - AluSx SINE Alu -1 311 1 2044 241 46 35 chr5 181424116 181424906 -21660626 - L1M4 LINE L1 -4868 1674 877 360 285 97 49 chr5 181424923 181425211 -21660321 - L1M4 LINE L1 -5599 943 642 254 311 57 19 chr5 181425395 181425501 -21660031 - L1M4 LINE L1 -6041 505 396 609 280 51 9 chr5 181425537 181425751 -21659781 - L1M4 LINE L1 -6306 236 14 219 311 16 0 chr5 181426110 181426171 -21659361 - MIR3 SINE MIR -39 169 108 328 238 12 88 chr5 181427140 181427300 -21658232 + GA-rich Low_complexity Low_complexity 6 153 0 616 316 139 19 chr5 181427510 181427807 -21657725 + L2 LINE L2 2826 3192 -121 183 80 0 0 chr5 181427807 181427832 -21657700 + (TATAG)n Simple_repeat Simple_repeat 2 26 0 616 316 139 19 chr5 181427832 181427965 -21657567 + L2 LINE L2 3192 3308 -5 377 310 47 16 chr5 181428488 181428617 -21656915 + MER5A DNA MER1_type 47 179 -10 325 286 24 0 chr5 181428696 181428780 -21656752 - L2 LINE L2 -1 3271 3186 488 324 99 24 chr5 181428909 181429202 -21656330 + L3 LINE CR1 1259 1573 -4 400 350 70 0 chr5 181429355 181429498 -21656034 - MIR SINE MIR -4 258 106 23 0 0 0 chr5 181430095 181430118 -21655414 + AT_rich Low_complexity Low_complexity 1 23 0 1104 222 29 0 chr5 181430225 181430432 -21655100 - MER58A DNA MER1_type 0 224 12 190 380 71 18 chr5 181430455 181430568 -21654964 + L2 LINE L2 3191 3309 -4 239 253 127 0 chr5 181431087 181431166 -21654366 + MER117 DNA MER1_type 24 112 -85 321 335 11 34 chr5 181431737 181431913 -21653619 - MER5B DNA MER1_type -2 176 5 * 581 326 45 16 chr5 181431907 181432152 -21653380 + MIR SINE MIR 8 259 -3 315 0 0 0 chr5 181432199 181432234 -21653298 + (ATG)n Simple_repeat Simple_repeat 2 36 0 1995 39 117 16 chr5 181432510 181432799 -21652733 + AluY SINE Alu 1 315 0 253 241 126 35 chr5 181433059 181433146 -21652386 - MLT1I LTR MaLR -37 372 278 * 267 307 150 51 chr5 181433113 181433426 -21652106 - MLT1H LTR MaLR -183 366 23 4283 177 47 32 chr5 181433959 181434682 -21650850 - L1 LINE L1 -1161 4985 4243 306 0 0 0 chr5 181434682 181434716 -21650816 + (TG)n Simple_repeat Simple_repeat 2 35 0 4283 177 47 32 chr5 181434716 181434935 -21650597 - L1 LINE L1 -1903 4243 4029 3742 164 27 41 chr5 181434929 181435721 -21649811 + L1MB1 LINE L1 4992 5769 -399 * 180 0 0 0 chr5 181435721 181435741 -21649791 + (TA)n Simple_repeat Simple_repeat 1 20 0 3742 164 27 41 chr5 181435741 181435998 -21649534 + L1MB1 LINE L1 5769 6028 -140 1877 130 11 7 chr5 181437098 181437374 -21648158 + AluSx SINE Alu 1 277 -35 216 0 0 0 chr5 181437379 181437403 -21648129 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 204 197 118 26 chr5 181437799 181437875 -21647657 + MIR SINE MIR 82 164 -98 411 303 82 32 chr5 181437931 181438343 -21647189 + MLT1J2 LTR MaLR 1 414 -32 337 400 25 1 chr5 181438539 181438743 -21646789 - MIR SINE MIR -53 209 3 246 267 53 13 chr5 181439089 181439164 -21646368 + L2 LINE L2 3193 3270 -2 440 331 6 17 chr5 181439165 181439343 -21646189 + GA-rich Low_complexity Low_complexity 1 176 0 360 328 35 0 chr5 181439471 181439587 -21645945 - MIR SINE MIR -57 151 32 2087 134 16 7 chr5 181440565 181440871 -21644661 + AluSx SINE Alu 1 309 -3 4570 168 11 58 chr5 181440977 181441920 -21643612 + L1MA4A LINE L1 5404 6301 -2 902 240 64 52 chr5 181441920 181442437 -21643095 + L1M4 LINE L1 2883 3405 -2741 4334 192 47 11 chr5 181442453 181443275 -21642257 - MER21B LTR ERV1 -11 852 1 284 227 100 71 chr5 181443512 181443545 -21641987 - L1MD3 LINE L1 0 8042 8011 2261 106 33 0 chr5 181443545 181443847 -21641685 + AluSx SINE Alu 1 312 0 284 227 100 71 chr5 181443847 181444241 -21641291 - L1MD3 LINE L1 -31 8011 7608 2258 112 6 9 chr5 181444886 181445207 -21640325 + L1PA8A LINE L1 5812 6131 0 4184 96 20 0 chr5 181446969 181447510 -21638022 - MER41A LTR ERV1 0 554 3 7628 94 27 2 chr5 181447510 181448543 -21636989 - MER41A-int LTR ERV1 -1 5945 4887 5525 106 41 44 chr5 181448541 181449094 -21636438 - MER41A-int LTR ERV1 -2319 3961 3408 * 1917 135 3 16 chr5 181449094 181449398 -21636134 + AluSx SINE Alu 1 300 -12 5525 106 41 44 chr5 181449398 181450055 -21635477 - MER41A-int LTR ERV1 -2872 3408 2764 2321 130 64 63 chr5 181450042 181450521 -21635011 - MER41A-int LTR ERV1 -5326 1265 3 * 4314 99 16 0 chr5 181450690 181451235 -21634297 - MER41A LTR ERV1 0 554 1 311 346 0 39 chr5 181451430 181451534 -21633998 + L2 LINE L2 3146 3245 -27 1896 162 10 3 chr5 181452471 181452780 -21632752 + AluJo SINE Alu 2 312 0 208 254 0 18 chr5 181452936 181452991 -21632541 + GA-rich Low_complexity Low_complexity 3 56 0 4276 106 9 2 chr5 181453689 181454272 -21631260 - L1PA13 LINE L1 -2 6161 5575 546 311 140 0 chr5 181454331 181454559 -21630973 + MIR SINE MIR 3 262 0 199 282 0 0 chr5 181454696 181454767 -21630765 + MIR SINE MIR 148 218 -44 745 299 156 8 chr5 181455251 181455643 -21629889 + LTR16A LTR ERVL 1 450 0 222 304 0 0 chr5 181455762 181455818 -21629714 + (CATA)n Simple_repeat Simple_repeat 2 57 0 394 324 157 23 chr5 181456509 181457061 -21628471 - L2 LINE L2 -3 3310 2671 232 297 174 14 chr5 181457259 181457397 -21628135 + MIR3 SINE MIR 17 176 -32 367 344 25 25 chr5 181458243 181458403 -21627129 - MIR3 SINE MIR -5 203 44 294 272 74 37 chr5 181459138 181459300 -21626232 + L3 LINE CR1 1261 1428 -149 1088 289 39 14 chr5 181459433 181459797 -21625735 - LTR16A LTR ERVL 0 450 78 450 261 87 19 chr5 181459916 181460077 -21625455 + Charlie1 DNA MER1_type 35 206 -2555 * 698 209 37 26 chr5 181460055 181460246 -21625286 + Charlie1 DNA MER1_type 2569 2761 0 343 313 30 15 chr5 181460973 181461104 -21624428 - MIR SINE MIR -70 192 60 272 313 37 15 chr5 181461341 181461475 -21624057 - MIR SINE MIR -86 176 40 1268 127 66 5 chr5 181462474 181462686 -21622846 - MSTA LTR MaLR -203 225 1 556 306 171 39 chr5 181462907 181463031 -21622501 - L2 LINE L2 -10 3303 3197 180 77 0 0 chr5 181463031 181463057 -21622475 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 556 306 171 39 chr5 181463057 181463449 -21622083 - L2 LINE L2 -116 3197 2709 209 33 33 0 chr5 181463449 181463479 -21622053 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 946 29 0 0 chr5 181463481 181463586 -21621946 - L1PA3 LINE L1 -3 6152 6048 374 41 0 0 chr5 181463586 181463635 -21621897 + L1PA4 LINE L1 5999 6047 -108 399 306 115 6 chr5 181463635 181463818 -21621714 - L2 LINE L2 -604 2710 2508 544 284 35 15 chr5 181464508 181464709 -21620823 + MLT1L LTR MaLR 409 613 -2 491 297 72 20 chr5 181464733 181464928 -21620604 - L2 LINE L2 -7 3306 3102 234 147 0 162 chr5 181465009 181465077 -21620455 + L1MC/D LINE L1 5686 5742 -2066 820 146 39 8 chr5 181465151 181465281 -21620251 + AluJo SINE Alu 2 135 -177 27 49 0 0 chr5 181465621 181465662 -21619870 + AT_rich Low_complexity Low_complexity 1 41 0 1189 209 141 15 chr5 181467302 181467565 -21617967 + AluJo SINE Alu 1 296 -6 617 315 68 45 chr5 181467965 181468511 -21617021 - L2 LINE L2 -4 3309 2752 1411 237 37 47 chr5 181468531 181468936 -21616596 - MLT1D LTR MaLR 0 505 105 1512 167 40 25 chr5 181468939 181469215 -21616317 + AluJo SINE Alu 1 280 -32 875 212 54 11 chr5 181469336 181469520 -21616012 + AluJo SINE Alu 121 312 0 558 207 18 0 chr5 181469532 181469643 -21615889 - MLT1D LTR MaLR -390 115 3 1028 301 47 50 chr5 181469652 181470074 -21615458 - L2 LINE L2 -595 2719 2299 363 289 56 0 chr5 181470436 181470526 -21615006 - MER5A DNA MER1_type -8 181 87 221 322 41 58 chr5 181470635 181470756 -21614776 - MIR SINE MIR -142 120 2 519 323 21 0 chr5 181470846 181471038 -21614494 + MIR SINE MIR 18 213 -49 555 361 77 39 chr5 181471060 181471542 -21613990 + L2 LINE L2 2804 3303 -10 340 329 107 21 chr5 181472443 181472583 -21612949 - L2 LINE L2 -9 3263 3112 2309 94 3 0 chr5 181473397 181473694 -21611838 - AluSg SINE Alu -12 298 1 276 308 0 58 chr5 181476090 181476210 -21609322 + MIR3 SINE MIR 65 177 -31 475 263 53 0 chr5 181476712 181476826 -21608706 - L2 LINE L2 -2 3311 3192 399 305 218 8 chr5 181476877 181477139 -21608393 - L3 LINE CR1 -289 1288 972 227 203 31 16 chr5 181477139 181477203 -21608329 + (TAA)n Simple_repeat Simple_repeat 2 66 0 356 314 114 23 chr5 181478110 181478285 -21607247 + MIR SINE MIR 13 203 -59 742 294 0 11 chr5 181478479 181478666 -21606866 - MER5A DNA MER1_type 0 189 5 1606 181 36 10 chr5 181479412 181479716 -21605816 + AluJb SINE Alu 1 312 0 326 313 38 46 chr5 181479866 181479997 -21605535 - L2 LINE L2 -4 3268 3139 292 344 62 12 chr5 181480075 181480235 -21605297 - MER5A DNA MER1_type -21 168 1 21395 93 7 4 chr5 181480769 181483680 -21601852 + L1P LINE L1 4 2923 -3223 245 130 0 0 chr5 181483814 181483860 -21601672 - LTR66 LTR ERVL -171 439 394 315 224 0 0 chr5 181483860 181483936 -21601596 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 345 344 31 19 chr5 181483949 181484109 -21601423 + MIR3 SINE MIR 30 191 -17 2084 118 20 3 chr5 181484867 181485173 -21600359 + AluSx SINE Alu 1 311 -1 297 371 83 10 chr5 181486312 181486517 -21599015 - MIR SINE MIR -14 248 29 246 306 0 0 chr5 181486605 181486667 -21598865 - MIR SINE MIR -136 126 65 276 186 42 0 chr5 181488019 181488076 -21597456 - MIR SINE MIR -64 144 92 444 336 125 28 chr5 181488328 181488721 -21596811 + MLT1K LTR MaLR 1 431 -157 264 261 26 39 chr5 181488743 181488896 -21596636 + (CAGAGA)n Simple_repeat Simple_repeat 2 152 0 273 98 0 0 chr5 181488908 181488949 -21596583 + (CA)n Simple_repeat Simple_repeat 2 42 0 232 373 8 24 chr5 181489003 181489129 -21596403 + MLT1K LTR MaLR 432 555 -33 235 290 142 45 chr5 181489129 181489305 -21596227 + MIR SINE MIR 20 212 -50 183 129 0 0 chr5 181489390 181489421 -21596111 + (TGG)n Simple_repeat Simple_repeat 1 31 0 236 299 51 107 chr5 181490116 181490293 -21595239 - MER5B DNA MER1_type -1 177 11 315 0 0 0 chr5 181492773 181492808 -21592724 + (TG)n Simple_repeat Simple_repeat 1 35 0 357 24 0 0 chr5 181493334 181493376 -21592156 + (CA)n Simple_repeat Simple_repeat 2 43 0 833 225 34 0 chr5 181493583 181493761 -21591771 - Zaphod DNA AcHobo -5 4026 3843 596 286 152 41 chr5 181494148 181494438 -21591094 - MER115 DNA AcHobo -257 436 115 2277 75 4 0 chr5 181496033 181496352 -21589180 + AluY SINE Alu 1 320 0 14791 90 6 4 chr5 181496352 181498781 -21586751 + L1P3 LINE L1 3294 5724 -448 2483 126 16 41 chr5 181498894 181499259 -21586273 + LTR18A LTR ERVL 2 357 0 460 312 75 53 chr5 181499360 181499626 -21585906 + MLT1I LTR MaLR 112 383 -26 375 289 10 19 chr5 181499868 181499972 -21585560 - MIR SINE MIR -158 104 2 191 355 136 18 chr5 181500952 181501121 -21584411 + MER5A DNA MER1_type 1 189 0 236 267 217 17 chr5 181502703 181502823 -21582709 - MIR SINE MIR -15 247 104 748 299 114 36 chr5 181503279 181503727 -21581805 + L2 LINE L2 2831 3313 0 225 236 86 132 chr5 181504254 181504428 -21581104 + MIR SINE MIR 81 246 -16 320 282 64 0 chr5 181505245 181505355 -21580177 - MIR SINE MIR -134 128 12 663 275 34 0 chr5 181505879 181506057 -21579475 + MIR SINE MIR 61 244 -18 516 283 84 45 chr5 181506889 181507137 -21578395 - MIR SINE MIR -2 260 7 517 308 129 13 chr5 181507853 181508077 -21577455 - MIR SINE MIR -11 251 2 370 252 50 42 chr5 181508534 181508653 -21576879 + L2 LINE L2 3186 3305 -8 395 298 44 37 chr5 181508960 181509182 -21576350 - MIR3 SINE MIR -13 249 15 234 260 117 0 chr5 181509705 181509782 -21575750 + MER113 DNA MER1_type? 132 217 -304 913 99 68 25 chr5 181509865 181510026 -21575506 + L1MB3 LINE L1 6014 6181 -2 262 226 36 71 chr5 181510026 181510110 -21575422 + L1MC/D LINE L1 5818 5898 -1910 24 53 0 0 chr5 181510367 181510405 -21575127 + AT_rich Low_complexity Low_complexity 1 38 0 516 247 175 0 chr5 181510499 181510653 -21574879 + MER5A DNA MER1_type 9 189 0 303 313 10 0 chr5 181510660 181510759 -21574773 + MER5B DNA MER1_type 79 178 0 351 325 8 16 chr5 181511743 181511869 -21573663 + L2 LINE L2 2678 2802 -512 250 275 75 131 chr5 181511913 181512073 -21573459 + L2 LINE L2 3122 3272 0 2670 30 3 0 chr5 181512124 181512426 -21573106 - AluY SINE Alu -8 303 1 369 308 75 128 chr5 181512870 181513230 -21572302 + L2 LINE L2 2907 3247 -25 185 330 87 0 chr5 181514111 181514214 -21571318 + MIR SINE MIR 37 148 -60 1188 217 84 51 chr5 181515046 181515378 -21570154 - MER2 DNA MER2_type 0 344 2 208 244 0 0 chr5 181515569 181515614 -21569918 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 207 293 0 0 chr5 181516507 181516548 -21568984 - MIR SINE MIR -138 70 30 429 163 32 16 chr5 181516967 181517090 -21568442 + CT-rich Low_complexity Low_complexity 2 126 0 1710 161 6 67 chr5 181517094 181517424 -21568108 - AluSx SINE Alu -2 310 1 194 222 19 0 chr5 181517779 181517833 -21567699 - MIR SINE MIR -5 257 203 213 180 20 60 chr5 181518180 181518230 -21567302 - L3 LINE CR1 -19 1558 1511 332 67 0 0 chr5 181518665 181518710 -21566822 - MSTB LTR MaLR -13 419 375 615 211 200 11 chr5 181518718 181518898 -21566634 - MSTB LTR MaLR -211 215 2 718 320 148 23 chr5 181519224 181519662 -21565870 - L2 LINE L2 -17 3296 2804 265 338 79 36 chr5 181519695 181519834 -21565698 - MIR3 SINE MIR -55 153 9 448 329 48 22 chr5 181521072 181521326 -21564206 - MIR SINE MIR -5 257 6 351 291 68 34 chr5 181521305 181521453 -21564079 - MIR SINE MIR -74 188 36 * 496 234 214 32 chr5 181521538 181521692 -21563840 + MIR SINE MIR 1 182 -80 323 254 30 75 chr5 181521779 181521913 -21563619 + MIR3 SINE MIR 74 201 -7 491 238 152 37 chr5 181522402 181522566 -21562966 - MIR SINE MIR -73 189 7 352 278 8 56 chr5 181523248 181523374 -21562158 + L2 LINE L2 3179 3298 -15 213 367 0 13 chr5 181523881 181523960 -21561572 + MIR SINE MIR 22 99 -163 402 215 41 135 chr5 181524560 181524703 -21560829 + MIR SINE MIR 58 168 -94 1480 176 67 8 chr5 181524703 181524970 -21560562 + AluJo SINE Alu 9 291 -21 402 215 41 135 chr5 181524970 181525049 -21560483 + MIR SINE MIR 168 253 -9 356 240 74 58 chr5 181525068 181525189 -21560343 - LTR67 LTR ERVL -3 554 432 385 239 203 56 chr5 181525386 181525583 -21559949 - MLT1L LTR MaLR 0 511 286 231 274 68 0 chr5 181525633 181525706 -21559826 - MLT1J LTR MaLR -334 177 100 330 308 90 23 chr5 181526358 181526491 -21559041 + MIR3 SINE MIR 38 179 -29 370 326 143 11 chr5 181527585 181527760 -21557772 + MIR SINE MIR 50 247 -15 525 312 106 21 chr5 181527910 181528192 -21557340 + L2 LINE L2 3008 3313 0 222 342 13 13 chr5 181528195 181528271 -21557261 - L2 LINE L2 -55 3217 3142 234 0 0 0 chr5 181528667 181528693 -21556839 + (A)n Simple_repeat Simple_repeat 1 26 0 470 290 101 14 chr5 181529089 181529296 -21556236 + MIR SINE MIR 12 236 -26 375 217 109 36 chr5 181530053 181530191 -21555341 - L1MA10 LINE L1 -24 6310 6163 22992 91 20 3 chr5 181530504 181534607 -21550925 - L1PA7 LINE L1 -4 6150 1983 257 356 0 85 chr5 181585086 181585263 -21500269 - MIR3 SINE MIR -15 193 32 557 261 64 64 chr5 181585318 181585536 -21499996 + MIR SINE MIR 31 248 -14 210 71 0 0 chr5 181585546 181585574 -21499958 + (TTA)n Simple_repeat Simple_repeat 2 29 0 363 339 48 12 chr5 181585726 181585917 -21499615 + MIR SINE MIR 15 212 -50 232 172 35 0 chr5 181585947 181586005 -21499527 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 2724 159 15 0 chr5 181586030 181586496 -21499036 - L1MC1 LINE L1 -18 6315 5843 1055 165 88 28 chr5 181586496 181586745 -21498787 + L1MC1 LINE L1 5596 5859 -474 581 329 132 40 chr5 181586779 181587524 -21498008 + L2 LINE L2 2475 3269 -3 7205 39 14 3 chr5 181587998 181589096 -21496436 - L1PA5 LINE L1 0 6154 5056 509 244 201 16 chr5 181589721 181590024 -21495508 + L1MDa LINE L1 1512 1870 -4670 2090 243 45 26 chr5 181590030 181590879 -21494653 + L1MDa LINE L1 2765 3629 -2911 40526 41 23 2 chr5 181591094 181597107 -21488425 + L1PA6 LINE L1 9 6147 -7 1304 224 23 55 chr5 181597216 181597614 -21487918 - MLT1B LTR MaLR -2 388 4 321 266 21 0 chr5 181597830 181597924 -21487608 + MIR SINE MIR 167 262 0 334 307 26 18 chr5 181598498 181598612 -21486920 - MIR SINE MIR -78 130 16 252 275 58 14 chr5 181599027 181599096 -21486436 + MIR SINE MIR 34 105 -103 1529 194 115 14 chr5 181599436 181599801 -21485731 + MSTB LTR MaLR 1 402 -24 1319 166 0 34 chr5 181599823 181600058 -21485474 + MER1B DNA MER1_type 2 228 -69 2236 76 17 3 chr5 181600061 181600352 -21485180 - AluY SINE Alu -16 295 1 479 259 35 12 chr5 181600408 181600578 -21484954 - MER113 DNA MER1_type? -80 441 268 530 122 12 0 chr5 181600579 181600661 -21484871 - AluSc SINE Alu -226 83 1 649 89 22 111 chr5 181600661 181600796 -21484736 + MER1B DNA MER1_type 217 339 0 221 289 206 21 chr5 181601221 181601318 -21484214 - MIR3 SINE MIR -7 201 87 576 276 91 26 chr5 181601428 181601660 -21483872 + MIR SINE MIR 14 260 -2 271 289 93 10 chr5 181601853 181601950 -21483582 - MER5A DNA MER1_type -69 120 16 191 349 105 0 chr5 181602106 181602192 -21483340 - MIR SINE MIR -44 218 124 282 204 0 0 chr5 181602222 181602271 -21483261 + L2 LINE L2 3224 3272 0 7118 177 68 39 chr5 181602579 181604311 -21481221 + L1MC3 LINE L1 5997 7778 -7 977 236 49 60 chr5 181604722 181605091 -21480441 - MLT1A1 LTR MaLR 0 365 1 1323 223 0 7 chr5 181606171 181606440 -21479092 + Tigger7 DNA MER2_type 1 267 -466 498 191 0 0 chr5 181606442 181606536 -21478996 + Tigger7 DNA MER2_type 2397 2490 -1 23 0 0 0 chr5 181607012 181607035 -21478497 + AT_rich Low_complexity Low_complexity 1 23 0 4179 156 27 15 chr5 181607043 181607846 -21477686 - L1MA4 LINE L1 -4 6296 5484 1612 221 14 8 chr5 181608517 181608879 -21476653 + MLT1A1 LTR MaLR 2 365 0 3835 123 17 10 chr5 181608935 181609536 -21475996 + L1PA16 LINE L1 5552 6156 -10 1704 147 24 61 chr5 181609541 181609950 -21475582 - Tigger3b DNA MER2_type -475 756 363 270 183 42 0 chr5 181609962 181610033 -21475499 - L1MA9 LINE L1 -191 6121 6048 1296 153 193 54 chr5 181610315 181610667 -21474865 - Tigger3b DNA MER2_type -830 401 1 1768 187 0 9 chr5 181610869 181611184 -21474348 + AluJo SINE Alu 1 312 0 211 204 62 142 chr5 181611997 181612110 -21473422 - MIR3 SINE MIR -15 193 90 3125 132 27 2 chr5 181612314 181612799 -21472733 + LOR1a LTR ERV1 1 497 0 3766 154 224 60 chr5 181612930 181614028 -21471504 + MER52C LTR ERV1 1 1278 0 28 71 0 0 chr5 181614555 181614611 -21470921 + AT_rich Low_complexity Low_complexity 1 56 0 422 168 21 0 chr5 181614781 181614876 -21470656 + L1MA8 LINE L1 6194 6290 -1 324 200 0 0 chr5 181614973 181615043 -21470489 + (TA)n Simple_repeat Simple_repeat 2 71 0 650 133 0 0 chr5 181615264 181615362 -21470170 - AluSg/x SINE Alu -5 304 207 611 200 9 0 chr5 181615363 181615478 -21470054 - AluJo/FLAM SINE Alu -186 116 1 329 263 146 18 chr5 181615718 181615889 -21469643 + LTR25 LTR ERV1 164 356 -438 273 169 0 141 chr5 181615892 181615963 -21469569 + MER61E LTR ERV1 99 159 -410 1092 137 17 6 chr5 181616071 181616246 -21469286 + MER61E LTR ERV1 342 518 -51 405 127 0 76 chr5 181616627 181616657 -21468875 - MER53 DNA DNA 0 189 158 1468 223 76 6 chr5 181616657 181616998 -21468534 + MLT1A1 LTR MaLR 1 365 0 405 127 0 76 chr5 181616998 181617046 -21468486 - MER53 DNA DNA -31 158 117 301 363 32 25 chr5 181617256 181617413 -21468119 - MIR3 SINE MIR -32 176 19 35 83 0 0 chr5 181617464 181617548 -21467984 + AT_rich Low_complexity Low_complexity 1 84 0 1141 69 0 0 chr5 181617736 181617880 -21467652 - L1PA13 LINE L1 -224 5939 5796 1467 73 0 0 chr5 181617892 181618084 -21467448 + L1PA13 LINE L1 5969 6160 -3 21 36 0 0 chr5 181620268 181620296 -21465236 + AT_rich Low_complexity Low_complexity 1 28 0 378 0 0 0 chr5 181620700 181620742 -21464790 + (GA)n Simple_repeat Simple_repeat 1 42 0 442 157 105 92 chr5 181621358 181621460 -21464072 + MLT1H LTR MaLR 1 107 -442 1894 124 57 0 chr5 181621460 181621743 -21463789 - AluSx SINE Alu -13 299 1 442 157 105 92 chr5 181621743 181621793 -21463739 + MLT1H LTR MaLR 107 155 -394 225 0 0 0 chr5 181621954 181621979 -21463553 + (TG)n Simple_repeat Simple_repeat 2 26 0 2089 118 17 0 chr5 181621987 181622276 -21463256 - AluSx SINE Alu -18 294 1 355 308 96 39 chr5 181622704 181623068 -21462464 + L1MC4a LINE L1 5539 5923 -1885 22 35 0 0 chr5 181623207 181623236 -21462296 + AT_rich Low_complexity Low_complexity 1 29 0 2227 117 0 0 chr5 181623590 181623888 -21461644 - AluSc SINE Alu -11 298 1 1929 48 8 0 chr5 181623908 181624158 -21461374 - L1MA2 LINE L1 0 6304 6053 185 154 26 0 chr5 181624487 181624526 -21461006 + CT-rich Low_complexity Low_complexity 2 41 0 572 303 87 21 chr5 181624656 181624897 -21460635 - MIR SINE MIR -1 261 5 311 105 18 0 chr5 181625022 181625079 -21460453 + (TG)n Simple_repeat Simple_repeat 2 59 0 485 297 191 13 chr5 181626054 181626277 -21459255 - MIR SINE MIR 0 262 3 777 190 42 0 chr5 181626379 181626521 -21459011 + FAM SINE Alu 18 165 -20 458 282 60 0 chr5 181626628 181626745 -21458787 - L2 LINE L2 0 3313 3190 385 289 80 38 chr5 181626929 181627168 -21458364 - MER102a DNA MER1_type -23 307 59 1034 194 24 0 chr5 181627214 181627425 -21458107 - L1MB1 LINE L1 -347 5821 5606 1937 150 11 3 chr5 181627425 181627771 -21457761 + L1MB1 LINE L1 5816 6165 -3 193 321 0 0 chr5 181628584 181628640 -21456892 + MIR SINE MIR 205 260 -2 925 161 40 15 chr5 181628643 181628842 -21456690 + L1MB2 LINE L1 5966 6169 -2 1348 151 61 59 chr5 181629013 181629503 -21456029 - L1MA4A LINE L1 -2 6298 5842 704 262 34 67 chr5 181630211 181630478 -21455054 + MIR SINE MIR 5 262 0 602 301 99 8 chr5 181630941 181631203 -21454329 + LTR16C LTR ERVL 195 480 -11 756 242 32 32 chr5 181631395 181631581 -21453951 - MER58A DNA MER1_type 0 224 39 384 294 284 10 chr5 181631808 181632002 -21453530 - MIR SINE MIR -2 260 14 2115 100 7 13 chr5 181632871 181633170 -21452362 - AluSx SINE Alu -11 301 5 308 199 83 86 chr5 181633831 181633975 -21451557 + MLT1K LTR MaLR 445 562 -26 349 283 10 10 chr5 181634897 181634996 -21450536 - MER5A DNA MER1_type -87 102 4 342 293 100 27 chr5 181635003 181635153 -21450379 + MIR3 SINE MIR 16 176 -32 826 180 0 119 chr5 181635163 181635225 -21450307 + FAM SINE Alu 2 70 -241 2107 138 0 0 chr5 181635225 181635523 -21450009 - AluSx SINE Alu -13 299 2 826 180 0 119 chr5 181635523 181635654 -21449878 + FAM SINE Alu 70 172 -3 945 122 6 28 chr5 181635672 181635853 -21449679 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 801 69 40 34 chr5 181635867 181636042 -21449490 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 193 375 25 53 chr5 181636158 181636401 -21449131 + L2 LINE L2 2437 2672 -642 1929 140 20 0 chr5 181636473 181636765 -21448767 - AluSq SINE Alu -11 302 5 197 335 15 105 chr5 181637017 181637217 -21448315 + L2 LINE L2 2851 3032 -240 1116 156 125 17 chr5 181638219 181638508 -21447024 - MER33 DNA MER1_type 0 324 5 438 236 56 14 chr5 181638536 181638680 -21446852 - L1MD2 LINE L1 -2 6357 6208 180 279 0 0 chr5 181639009 181639052 -21446480 + L2 LINE L2 3220 3262 -10 428 312 195 32 chr5 181639964 181640457 -21445075 + L2 LINE L2 2400 2972 -342 285 271 47 37 chr5 181640712 181640819 -21444713 + MIR SINE MIR 35 142 -120 252 345 60 26 chr5 181641314 181641430 -21444102 - MIR SINE MIR -80 182 63 275 347 33 0 chr5 181641573 181641694 -21443838 + L1ME4a LINE L1 5513 5637 -484 1828 237 76 35 chr5 181641790 181642838 -21442694 + L1ME2 LINE L1 4842 5979 -185 2342 91 0 0 chr5 181642838 181643134 -21442398 + AluSc SINE Alu 1 296 -13 1828 237 76 35 chr5 181643134 181643216 -21442316 + L1ME2 LINE L1 5979 6056 -108 368 209 25 140 chr5 181643318 181643553 -21441979 + L1ME4a LINE L1 5823 6030 -91 2008 216 34 22 chr5 181643816 181644315 -21441217 + MLT1D LTR MaLR 1 505 0 2459 246 15 43 chr5 181645165 181646008 -21439524 - L1P LINE L1 -2452 3694 2875 1501 221 0 0 chr5 181646013 181646316 -21439216 + L1PA16 LINE L1 5861 6163 -3 539 252 0 0 chr5 181646644 181646775 -21438757 + LTR37B LTR ERV1 5 135 -333 1058 208 39 88 chr5 181646795 181646980 -21438552 - L1MA9 LINE L1 -6 7008 6815 342 0 0 0 chr5 181646980 181647018 -21438514 + (TG)n Simple_repeat Simple_repeat 1 38 0 1058 208 39 88 chr5 181647018 181647156 -21438376 - L1MA9 LINE L1 -199 6815 6672 1855 157 141 0 chr5 181647156 181647531 -21438001 + MSTA LTR MaLR 1 428 0 1058 208 39 88 chr5 181647531 181647717 -21437815 - L1MA9 LINE L1 -342 6672 2543 2242 274 55 36 chr5 181647893 181648660 -21436872 - L1MA9 LINE L1 -4161 2688 1892 2270 110 0 10 chr5 181648660 181648969 -21436563 - AluSg SINE Alu -2 308 3 2242 274 55 36 chr5 181648969 181649295 -21436237 - L1MA9 LINE L1 -4957 1892 1574 254 335 45 28 chr5 181650431 181650607 -21434925 + L2 LINE L2 3135 3313 0 277 347 112 0 chr5 181651338 181651436 -21434096 + L2 LINE L2 3150 3258 -14 21 0 0 0 chr5 181651436 181651457 -21434075 + AT_rich Low_complexity Low_complexity 1 21 0 286 344 0 11 chr5 181651502 181651592 -21433940 - MIR3 SINE MIR -5 203 115 805 258 0 59 chr5 181651945 181652166 -21433366 - MIR SINE MIR -10 252 45 389 226 25 2 chr5 181652235 181652337 -21433195 - MLT2B1 LTR ERVL -348 116 12 230 346 0 9 chr5 181652338 181652445 -21433087 + MLT1K LTR MaLR 483 588 0 1028 219 68 74 chr5 181652940 181653384 -21432148 - MLT2B1 LTR ERVL 0 414 1 1719 137 42 11 chr5 181654690 181654974 -21430558 + AluSx SINE Alu 1 293 -19 387 0 0 0 chr5 181654980 181655023 -21430509 + (CA)n Simple_repeat Simple_repeat 2 44 0 2017 120 0 36 chr5 181655030 181655339 -21430193 - AluSp SINE Alu -13 300 3 760 322 67 22 chr5 181655722 181656082 -21429450 + MLT1K LTR MaLR 17 392 -196 1997 297 174 42 chr5 181656093 181657914 -21427618 + L2 LINE L2 1225 3304 -9 282 319 49 14 chr5 181657952 181658096 -21427436 + MLT1K LTR MaLR 431 579 -9 530 311 63 11 chr5 181658103 181658293 -21427239 - MER63A DNA MER1_type 0 210 11 381 325 170 11 chr5 181658293 181658564 -21426968 - L2 LINE L2 -606 2708 2395 290 228 175 18 chr5 181659570 181659684 -21425848 - MER103 DNA DNA -23 143 12 22 0 0 0 chr5 181661125 181661147 -21424385 + AT_rich Low_complexity Low_complexity 1 22 0 204 315 67 11 chr5 181661456 181661545 -21423987 + MIR3 SINE MIR 100 193 -15 4714 194 15 8 chr5 181661696 181662034 -21423498 + L1P LINE L1 1667 2001 -4145 581 37 12 0 chr5 181662034 181662116 -21423416 + L1PA2 LINE L1 6073 6155 0 4714 194 15 8 chr5 181662116 181662755 -21422777 + L1P LINE L1 2001 2651 -3495 2940 78 81 0 chr5 181662756 181663165 -21422367 + THE1A-int LTR MaLR 1139 1580 0 2025 122 58 23 chr5 181663165 181663508 -21422024 + THE1A LTR MaLR 1 355 0 4898 92 41 16 chr5 181663508 181664246 -21421286 + L1PA12 LINE L1 5404 6159 -9 2153 258 74 53 chr5 181664259 181666107 -21419425 - L1MEc LINE L1 -3339 3602 1775 2303 174 53 53 chr5 181666107 181666612 -21418920 - MLT1D LTR MaLR 0 505 1 2153 258 74 53 chr5 181666612 181666642 -21418890 - L1MEc LINE L1 -5166 1775 1747 1673 291 64 14 chr5 181666664 181667443 -21418089 - L1MEc LINE L1 -4909 1514 697 845 293 16 43 chr5 181667619 181668063 -21417469 - L1MEc LINE L1 -5975 448 17 444 248 8 45 chr5 181668229 181668362 -21417170 - MIR SINE MIR -11 251 124 355 358 63 32 chr5 181668969 181669349 -21416183 + L2 LINE L2 2384 2775 -539 796 255 96 62 chr5 181669440 181669762 -21415770 - MLT1G3 LTR MaLR -94 436 104 560 218 24 16 chr5 181669767 181669891 -21415641 - MLT1G3 LTR MaLR -464 131 7 264 280 40 0 chr5 181669963 181670038 -21415494 + L2 LINE L2 3194 3271 -1 1010 224 63 40 chr5 181672028 181672376 -21413156 + MLT1A2 LTR MaLR 19 374 0 219 279 200 14 chr5 181672749 181672889 -21412643 - MIR SINE MIR -69 193 28 689 254 113 0 chr5 181673370 181673547 -21411985 - MIR SINE MIR -64 198 2 236 375 27 9 chr5 181674473 181674585 -21410947 + MER5A DNA MER1_type 7 120 -69 1441 54 0 0 chr5 181674693 181674877 -21410655 - L1P2 LINE L1 -565 5589 5406 278 330 39 0 chr5 181675118 181675221 -21410311 + MIR SINE MIR 48 154 -108 363 305 78 0 chr5 181675701 181675829 -21409703 - L2 LINE L2 -3 3310 3173 4548 168 11 1 chr5 181676448 181677278 -21408254 + L1PA15 LINE L1 5327 6164 -1 193 410 0 0 chr5 181678134 181678217 -21407315 - MIR SINE MIR -17 245 163 354 209 29 86 chr5 181678784 181678923 -21406609 + MLT1K LTR MaLR 458 588 0 197 83 28 0 chr5 181679814 181679850 -21405682 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 447 337 172 28 chr5 181679852 181680412 -21405120 - L2 LINE L2 -19 3294 2638 2172 103 0 70 chr5 181681252 181681629 -21403903 - AluSg SINE Alu 0 356 3 529 208 9 9 chr5 181682272 181682378 -21403154 - L2 LINE L2 -1 3312 3207 1252 187 25 44 chr5 181682380 181682699 -21402833 + L1MB2 LINE L1 5714 6036 -135 386 207 10 10 chr5 181682701 181682814 -21402718 - ALR/Alpha Satellite centromeric 0 113 1 1974 133 3 36 chr5 181682815 181683124 -21402408 - AluSg SINE Alu -11 299 1 442 174 45 61 chr5 181683167 181683252 -21402280 + L1MB2 LINE L1 6040 6124 -47 1887 97 112 8 chr5 181683252 181683519 -21402013 - AluSg SINE Alu -15 295 1 442 174 45 61 chr5 181683519 181683565 -21401967 + L1MB2 LINE L1 6124 6169 -2 436 299 57 51 chr5 181683630 181683944 -21401588 - L2 LINE L2 -126 3187 2872 240 340 138 46 chr5 181684039 181684321 -21401211 - L2 LINE L2 -39 3233 2926 1218 181 60 4 chr5 181684321 181684602 -21400930 - L1MB2 LINE L1 -99 6072 5776 6194 121 236 22 chr5 181684887 181686284 -21399248 - pTR5 LTR ERV1 0 2438 743 1710 208 0 10 chr5 181687502 181687815 -21397717 - AluJb SINE Alu -2 310 1 348 315 46 0 chr5 181687878 181687986 -21397546 - L2 LINE L2 -4 3309 3197 258 286 18 54 chr5 181688147 181688259 -21397273 + MIR SINE MIR 34 141 -121 271 255 87 19 chr5 181688398 181688501 -21397031 + MIR SINE MIR 35 143 -65 1917 135 3 0 chr5 181688576 181688858 -21396674 - AluSq SINE Alu -30 283 1 21 0 0 0 chr5 181688896 181688917 -21396615 + AT_rich Low_complexity Low_complexity 1 21 0 1076 252 72 12 chr5 181689342 181689663 -21395869 - MER58B DNA MER1_type -1 340 1 225 211 0 0 chr5 181689722 181689774 -21395758 + (CATA)n Simple_repeat Simple_repeat 3 54 0 128 43 0 0 chr5 181690136 181690320 -21395212 + AT_rich Low_complexity Low_complexity 1 184 0 292 268 54 36 chr5 181690644 181690812 -21394720 - L1MDa LINE L1 -4990 1416 1246 * 626 258 135 59 chr5 181690810 181691233 -21394299 - L1MDa LINE L1 -5599 797 343 3218 185 77 50 chr5 181692572 181693818 -21391714 - L1MB5 LINE L1 0 6174 4891 15066 172 23 14 chr5 181694141 181696981 -21388551 + L1M1 LINE L1 13 2877 -4688 3458 210 29 24 chr5 181696971 181697931 -21387601 + L1M1 LINE L1 4522 5486 -2079 * 4811 121 11 21 chr5 181697931 181698732 -21386800 + L1MA3 LINE L1 5505 6297 -8 113 51 0 0 chr5 181698836 181699012 -21386520 + AT_rich Low_complexity Low_complexity 1 176 0 246 192 0 0 chr5 181699374 181699426 -21386106 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1054 256 72 12 chr5 181699485 181699806 -21385726 + MER58B DNA MER1_type 1 340 -1 5000 161 21 12 chr5 181700246 181700290 -21385242 + MER54A LTR ERVL 9 51 -850 2178 125 3 0 chr5 181700290 181700602 -21384930 + AluSq SINE Alu 1 313 0 5000 161 21 12 chr5 181700602 181701439 -21384093 + MER54A LTR ERVL 51 898 -3 1365 157 112 14 chr5 181701498 181701844 -21383688 - MSTA LTR MaLR 0 375 1 504 233 12 83 chr5 181701858 181702098 -21383434 - L1MEc LINE L1 -2956 3426 3204 1201 248 109 30 chr5 181702109 181702602 -21382930 - L1MC4a LINE L1 0 7808 7277 845 248 32 13 chr5 181702602 181702917 -21382615 - L1MEc LINE L1 -3186 3196 2876 1033 260 70 28 chr5 181702929 181703223 -21382309 - L1MEc LINE L1 -3597 2785 2505 2328 96 3 0 chr5 181703223 181703525 -21382007 - AluSq SINE Alu -10 303 1 1033 260 70 28 chr5 181703525 181704178 -21381354 - L1MEc LINE L1 -3877 2505 1839 309 313 61 0 chr5 181704183 181704282 -21381250 - L1MEc LINE L1 -5250 1134 1030 416 139 0 0 chr5 181704290 181704362 -21381170 - Charlie2a DNA MER1_type -1324 1538 1467 528 259 53 19 chr5 181704398 181704628 -21380904 - Charlie2 DNA MER1_type -2137 645 409 283 277 50 0 chr5 181704898 181705017 -21380515 - L1MEc LINE L1 -5208 1164 1040 344 322 76 38 chr5 181705057 181705268 -21380264 - L1MEc LINE L1 -5582 790 572 279 246 8 85 chr5 181705273 181705391 -21380141 + MLT1K LTR MaLR 480 588 0 252 322 144 52 chr5 181705497 181705671 -21379861 + L2 LINE L2 3082 3271 -1 1028 292 25 82 chr5 181705747 181706412 -21379120 + L2 LINE L2 2664 3293 -20 1968 121 0 42 chr5 181706412 181706718 -21378814 + AluSq SINE Alu 1 293 -20 1028 292 25 82 chr5 181706718 181706738 -21378794 + L2 LINE L2 3293 3313 0 186 324 44 0 chr5 181706794 181706862 -21378670 + L2 LINE L2 2664 2734 -580 235 279 12 35 chr5 181708046 181708132 -21377400 - MIR SINE MIR 0 262 179 277 100 0 0 chr5 181708140 181708180 -21377352 - MLT2D LTR ERVL 0 414 375 324 0 0 0 chr5 181708180 181708216 -21377316 + (TG)n Simple_repeat Simple_repeat 2 37 0 1741 177 0 16 chr5 181710076 181710381 -21375151 - AluSx SINE Alu -12 300 1 190 370 43 0 chr5 181710381 181710473 -21375059 - MIR SINE MIR -58 204 109 444 300 50 33 chr5 181710496 181710676 -21374856 + MIR SINE MIR 52 234 -28 625 312 82 80 chr5 181711155 181711505 -21374027 + L2 LINE L2 2505 2853 -460 2190 118 7 0 chr5 181711505 181711802 -21373730 - AluSq SINE Alu -14 299 1 625 312 82 80 chr5 181711802 181712233 -21373299 + L2 LINE L2 2853 3313 0 498 212 25 51 chr5 181712894 181713012 -21372520 + MER5B DNA MER1_type 1 115 -63 216 299 11 35 chr5 181713617 181713704 -21371828 + MIR SINE MIR 169 253 -9 183 235 0 0 chr5 181714854 181714905 -21370627 + GA-rich Low_complexity Low_complexity 3 53 0 513 326 128 7 chr5 181714910 181715192 -21370340 + L2 LINE L2 2992 3307 -6 21 0 0 0 chr5 181715806 181715827 -21369705 + AT_rich Low_complexity Low_complexity 1 21 0 354 331 100 0 chr5 181716138 181716409 -21369123 - L2 LINE L2 -224 3048 2748 402 299 170 0 chr5 181717127 181717274 -21368258 - MER5A DNA MER1_type -6 183 12 244 385 123 0 chr5 181717468 181717720 -21367812 + L2 LINE L2 2491 2773 -541 227 152 43 0 chr5 181717842 181717888 -21367644 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 672 299 60 7 chr5 181717893 181718381 -21367151 - MLT2F LTR ERVL -66 597 1 224 343 38 19 chr5 181718492 181718597 -21366935 + L2 LINE L2 3201 3307 -6 460 302 74 16 chr5 181718715 181718904 -21366628 + L1ME1 LINE L1 335 534 -5862 * 869 263 99 48 chr5 181718895 181718963 -21366569 + L1ME1 LINE L1 876 939 -5457 2082 129 0 3 chr5 181718963 181719250 -21366282 + AluSx SINE Alu 1 286 -26 869 263 99 48 chr5 181719250 181719916 -21365616 + L1ME1 LINE L1 939 1648 -4748 * 3620 239 39 28 chr5 181719906 181721100 -21364432 + L1M4 LINE L1 3325 4531 -1615 1484 270 90 13 chr5 181721535 181722394 -21363138 + L1ME1 LINE L1 3088 4035 -2180 3813 155 24 2 chr5 181722403 181723461 -21362071 + L1PA15 LINE L1 4800 5882 -283 229 208 0 19 chr5 181723462 181723515 -21362017 - L1M4 LINE L1 -1986 4160 4109 810 220 0 43 chr5 181723525 181723711 -21361821 + AluJo SINE Alu 3 180 -132 1714 138 0 22 chr5 181723711 181723979 -21361553 + L1PA15 LINE L1 5883 6144 -21 1155 167 9 29 chr5 181724037 181724247 -21361285 - AluJo SINE Alu -25 287 82 407 247 6 17 chr5 181724447 181724625 -21360907 + GA-rich Low_complexity Low_complexity 4 179 0 2813 231 64 46 chr5 181724625 181724871 -21360661 + L1ME1 LINE L1 4223 4463 -1772 1179 83 0 0 chr5 181724871 181725028 -21360504 + L1PA3 LINE L1 5994 6150 -5 2813 231 64 46 chr5 181725028 181726753 -21358779 + L1ME1 LINE L1 4463 6231 -4 403 222 133 0 chr5 181727932 181728022 -21357510 - L2 LINE L2 0 3313 3212 250 273 174 12 chr5 181728523 181728596 -21356936 + MIR SINE MIR 70 130 -132 8706 100 22 21 chr5 181728596 181729881 -21355651 - HSMAR1 DNA Mariner 0 1287 2 250 273 174 12 chr5 181729881 181729968 -21355564 + MIR SINE MIR 130 256 -6 445 303 94 22 chr5 181730136 181730413 -21355119 + L1M4 LINE L1 2653 2949 -3197 44 80 0 0 chr5 181730413 181730513 -21355019 + AT_rich Low_complexity Low_complexity 1 100 0 372 298 62 19 chr5 181730514 181730772 -21354760 - L1M4 LINE L1 -3204 2942 2674 332 173 38 45 chr5 181730934 181731067 -21354465 + (TA)n Simple_repeat Simple_repeat 2 133 0 628 239 19 78 chr5 181731072 181731261 -21354271 + L1M4 LINE L1 2951 3117 -3029 2875 0 0 3 chr5 181731261 181731573 -21353959 + AluYa5 SINE Alu 1 311 0 628 239 19 78 chr5 181731573 181731692 -21353840 + L1M4 LINE L1 3117 3241 -2905 375 23 0 0 chr5 181731706 181731750 -21353782 + (CA)n Simple_repeat Simple_repeat 1 44 0 9868 112 2 26 chr5 181731853 181733404 -21352128 + HERVH LTR ERV1 1475 2987 -4726 833 150 27 0 chr5 181733398 181733545 -21351987 + HERVH LTR ERV1 3140 3290 -4423 * 7741 126 12 5 chr5 181733535 181735244 -21350288 + HERVH LTR ERV1 3492 5286 -1805 1406 129 18 5 chr5 181735241 181735465 -21350067 + HERVH LTR ERV1 5593 5819 -1894 * 2335 111 51 0 chr5 181735465 181735836 -21349696 + HERVH LTR ERV1 7324 7713 0 2434 98 128 0 chr5 181735836 181736233 -21349299 + LTR7 LTR ERV1 1 448 -2 452 194 11 32 chr5 181736438 181736531 -21349001 - FLAM_A SINE Alu -51 91 1 1528 116 5 5 chr5 181737721 181737937 -21347595 - AluSg/x SINE Alu -17 293 78 324 262 115 0 chr5 181738102 181738224 -21347308 - MLT1B LTR MaLR -254 136 1 2233 98 3 0 chr5 181738388 181738684 -21346848 - AluSp SINE Alu -16 297 1 2385 107 100 15 chr5 181739111 181739522 -21346010 + LTR7 LTR ERV1 3 448 -2 2333 117 33 0 chr5 181739524 181739917 -21345615 + HERVH LTR ERV1 1 406 -7307 8836 134 37 23 chr5 181740123 181741769 -21343763 - HERVH LTR ERV1 -5842 1871 203 342 0 0 0 chr5 181742020 181742058 -21343474 + (CA)n Simple_repeat Simple_repeat 1 38 0 1624 201 14 0 chr5 181742180 181742468 -21343064 - AluJb SINE Alu -20 292 1 199 224 35 35 chr5 181742727 181742785 -21342747 - MIR SINE MIR -130 132 75 22 70 0 0 chr5 181742916 181742959 -21342573 + AT_rich Low_complexity Low_complexity 1 43 0 262 287 30 90 chr5 181743566 181743733 -21341799 - L2 LINE L2 -5 3308 3152 972 332 26 0 chr5 181743766 181744118 -21341414 - L2 LINE L2 -134 3179 2819 183 318 116 39 chr5 181744759 181744888 -21340644 + MIR SINE MIR 34 172 -90 435 311 74 53 chr5 181744980 181745214 -21340318 + MIR SINE MIR 34 260 -2 322 314 113 73 chr5 181745264 181745768 -21339764 - LTR67 LTR ERVL -18 539 16 300 299 76 54 chr5 181747201 181747385 -21338147 + L1MEd LINE L1 900 1087 -5032 407 292 109 27 chr5 181747422 181747944 -21337588 + L1MEd LINE L1 1132 1731 -4435 387 0 0 0 chr5 181748138 181748181 -21337351 + (TCTA)n Simple_repeat Simple_repeat 1 43 0 1085 206 38 14 chr5 181748213 181748504 -21337028 + L1 LINE L1 3439 3736 -2410 6448 202 55 25 chr5 181748623 181750768 -21334764 + L1P4 LINE L1 3543 5761 -405 1648 131 8 12 chr5 181750768 181751020 -21334512 - AluSx SINE Alu -14 298 48 6448 202 55 25 chr5 181751020 181751084 -21334448 + L1P4 LINE L1 5761 5822 -344 411 163 43 60 chr5 181751081 181751214 -21334318 - L1P LINE L1 -2033 4113 3499 * 1378 100 19 14 chr5 181751357 181751567 -21333965 - L1PA10 LINE L1 -12 6156 5946 369 376 26 18 chr5 181751569 181751912 -21333620 - L1M4 LINE L1 -3628 2518 2173 818 234 47 58 chr5 181752229 181752742 -21332790 + L1MC5 LINE L1 7405 7911 -50 370 214 48 69 chr5 181752888 181753033 -21332499 + L1MC5 LINE L1 6991 7132 -829 569 153 0 0 chr5 181753033 181753118 -21332414 - AluJ/FLAM SINE Alu -227 85 1 522 279 74 46 chr5 181753490 181753992 -21331540 + L1MC5 LINE L1 7351 7866 -95 240 269 106 19 chr5 181754702 181754806 -21330726 + MIR SINE MIR 131 243 -19 617 345 81 50 chr5 181754862 181755037 -21330495 + MLT1K LTR MaLR 10 178 -410 966 186 85 5 chr5 181755037 181755236 -21330296 - MER20 DNA MER1_type 0 219 5 617 345 81 50 chr5 181755236 181755582 -21329950 + MLT1K LTR MaLR 178 547 -41 532 79 0 13 chr5 181755879 181755955 -21329577 + MADE1 DNA Mariner 5 79 -1 479 298 63 5 chr5 181756813 181757004 -21328528 - MIR SINE MIR -15 247 46 1245 208 143 46 chr5 181761034 181761447 -21324085 - MSTB2 LTR MaLR -4 453 1 190 348 29 14 chr5 181761622 181761691 -21323841 + MIR SINE MIR 13 82 -180 728 305 129 31 chr5 181761694 181762081 -21323451 - MLT1J2 LTR MaLR 0 450 26 274 239 130 11 chr5 181762105 181762197 -21323335 + MIR SINE MIR 81 183 -79 323 410 84 23 chr5 181763409 181763851 -21321681 + L2 LINE L2 2804 3272 0 723 187 0 8 chr5 181764046 181764169 -21321363 + AluJb SINE Alu 1 122 -190 496 148 0 0 chr5 181764199 181764287 -21321245 + AluJ/FRAM SINE Alu 221 308 -4 1805 138 44 70 chr5 181765148 181765533 -21319999 - THE1C LTR MaLR 0 375 1 297 75 0 0 chr5 181765572 181765612 -21319920 + (CA)n Simple_repeat Simple_repeat 1 40 0 235 299 52 10 chr5 181766113 181766210 -21319322 + MIR SINE MIR 162 262 0 499 132 0 114 chr5 181766666 181766780 -21318752 + LTR7 LTR ERV1 1 101 -349 6410 112 12 46 chr5 181766780 181767942 -21317590 + HERVH LTR ERV1 1 1123 -6590 8646 200 63 48 chr5 181768058 181770988 -21314544 + HERVH LTR ERV1 2173 5145 -2568 1261 132 18 22 chr5 181770985 181771213 -21314319 + HERVH LTR ERV1 5593 5819 -1894 * 2199 109 48 13 chr5 181771213 181771590 -21313942 + HERVH LTR ERV1 7324 7713 0 2458 88 96 10 chr5 181771590 181771997 -21313535 + LTR7 LTR ERV1 1 442 -8 321 313 108 28 chr5 181772010 181772259 -21313273 - L2 LINE L2 -527 2787 2519 287 65 22 0 chr5 181772515 181772561 -21312971 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 233 365 40 0 chr5 181772830 181772904 -21312628 + L3 LINE CR1 1405 1481 -96 24 32 0 0 chr5 181773051 181773082 -21312450 + AT_rich Low_complexity Low_complexity 1 31 0 196 188 0 0 chr5 181773271 181773303 -21312229 - MIR SINE MIR -57 151 120 540 261 173 18 chr5 181773378 181773604 -21311928 + MIR SINE MIR 2 262 0 24 32 0 0 chr5 181773993 181774024 -21311508 + AT_rich Low_complexity Low_complexity 1 31 0 195 206 32 79 chr5 181774168 181774231 -21311301 - MIR SINE MIR -132 76 17 209 358 0 0 chr5 181774641 181774708 -21310824 + L2 LINE L2 3193 3259 -13 316 265 132 22 chr5 181774735 181774871 -21310661 + MIR SINE MIR 65 215 -47 601 282 62 13 chr5 181775376 181775602 -21309930 + MIR SINE MIR 22 257 -5 1217 223 4 12 chr5 181777873 181778155 -21307377 + AluJo SINE Alu 40 319 0 183 300 250 0 chr5 181778667 181778767 -21306765 - MIR SINE MIR -26 236 112 273 338 37 14 chr5 181778905 181779047 -21306485 + MIR SINE MIR 1 145 -63 369 223 160 0 chr5 181782490 181782584 -21302948 - MER5A DNA MER1_type -77 112 4 2381 76 3 22 chr5 181782682 181782996 -21302536 - AluY SINE Alu -3 308 1 1008 267 17 3 chr5 181783080 181783436 -21302096 + L1 LINE L1 3268 3628 -2518 4863 151 35 15 chr5 181783436 181784573 -21300959 + L1PB3 LINE L1 4991 6147 -7 1129 167 35 12 chr5 181784905 181785162 -21300370 - L1MA8 LINE L1 -1 6290 6028 3241 115 9 22 chr5 181785162 181785706 -21299826 - L1MA5A LINE L1 0 6297 5757 1621 195 5 55 chr5 181785715 181786115 -21299417 - L1MA7 LINE L1 -252 6039 5660 2429 78 0 0 chr5 181786519 181786814 -21298718 - AluSc SINE Alu -14 295 1 256 307 14 15 chr5 181787104 181787214 -21298318 - MIR SINE MIR -33 175 66 257 271 85 51 chr5 181787324 181787442 -21298090 - MIR SINE MIR -57 151 30 659 205 0 98 chr5 181787656 181787861 -21297671 - MER20 DNA MER1_type -1 218 34 184 188 128 111 chr5 181787950 181788067 -21297465 - MIR SINE MIR -56 206 88 240 239 14 28 chr5 181788242 181788313 -21297219 - MIR SINE MIR -61 147 91 286 324 57 9 chr5 181788361 181788466 -21297066 + L2 LINE L2 3204 3313 0 305 271 74 8 chr5 181789365 181789487 -21296045 - MLT1K LTR MaLR -41 547 418 271 268 120 29 chr5 181790434 181790572 -21294960 - MIR SINE MIR -62 146 26 417 313 152 8 chr5 181791698 181791954 -21293578 + L1ME LINE L1 5346 5638 -483 280 288 0 0 chr5 181792999 181793079 -21292453 + MLT1K LTR MaLR 501 580 -8 1419 201 10 73 chr5 181793223 181793606 -21291926 - MLT1A2 LTR MaLR -15 359 1 407 332 77 24 chr5 181793646 181793893 -21291639 - MIR SINE MIR 0 262 3 872 212 38 4 chr5 181794732 181794968 -21290564 - MLT1C LTR MaLR -129 338 95 695 297 75 29 chr5 181796050 181796434 -21289098 - MLT1K LTR MaLR -116 472 71 405 259 69 0 chr5 181796470 181796601 -21288931 - MER97a DNA MER1_type? -715 179 40 263 314 0 35 chr5 181796846 181796932 -21288600 - MIR SINE MIR -58 150 68 6167 119 4 14 chr5 181797087 181798034 -21287498 - THE1B-int LTR MaLR -642 938 1 2145 115 75 26 chr5 181798034 181798381 -21287151 - THE1B LTR MaLR 0 364 1 272 322 41 20 chr5 181798579 181798725 -21286807 - MER5A DNA MER1_type 0 189 41 1931 254 82 34 chr5 181798764 181799642 -21285890 - L2 LINE L2 0 3313 2410 1485 222 32 22 chr5 181800030 181800399 -21285133 + MLT2D LTR ERVL 42 414 0 244 225 42 28 chr5 181801789 181801860 -21283672 + CT-rich Low_complexity Low_complexity 1 72 0 306 304 71 0 chr5 181802835 181802947 -21282585 + Charlie8 DNA MER1_type 155 274 -2143 231 326 87 11 chr5 181804635 181804727 -21280805 + L2 LINE L2 3163 3261 -11 383 349 52 26 chr5 181805170 181805399 -21280133 - MIR SINE MIR 0 262 28 21 0 0 0 chr5 181805505 181805526 -21280006 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 181806018 181806040 -21279492 + (CAAAAA)n Simple_repeat Simple_repeat 1 22 0 306 107 0 0 chr5 181806848 181806904 -21278628 + (TG)n Simple_repeat Simple_repeat 1 56 0 22 35 0 0 chr5 181807002 181807031 -21278501 + AT_rich Low_complexity Low_complexity 1 29 0 222 207 0 0 chr5 181807682 181807740 -21277792 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr5 181808002 181808023 -21277509 + AT_rich Low_complexity Low_complexity 1 21 0 243 283 54 0 chr5 181811654 181811746 -21273786 + MIR SINE MIR 102 198 -64 317 295 151 7 chr5 181813080 181813219 -21272313 - MIR SINE MIR -51 211 53 189 375 38 0 chr5 181813622 181813702 -21271830 + MIR3 SINE MIR 92 174 -34 274 372 8 16 chr5 181813722 181813843 -21271689 - L2 LINE L2 0 3272 3153 182 327 84 9 chr5 181813862 181813969 -21271563 + MIR SINE MIR 34 148 -114 6915 63 18 0 chr5 181814356 181815431 -21270101 - L1PA7 LINE L1 -5 6149 5069 423 303 14 56 chr5 181815444 181815586 -21269946 + L2 LINE L2 3137 3272 0 369 315 98 7 chr5 181815868 181816011 -21269521 - MIR SINE MIR -48 214 59 182 287 11 0 chr5 181816691 181816778 -21268754 + CT-rich Low_complexity Low_complexity 3 90 0 280 360 0 0 chr5 181817473 181817559 -21267973 - MIR SINE MIR -58 150 65 742 257 27 0 chr5 181817686 181817869 -21267663 - MER5A DNA MER1_type 0 189 2 609 315 68 17 chr5 181818007 181818242 -21267290 - MIR SINE MIR -12 250 4 183 80 0 0 chr5 181818478 181818503 -21267029 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 263 257 69 40 chr5 181821018 181821119 -21264413 + L2 LINE L2 3206 3309 -4 21 0 0 0 chr5 181821359 181821380 -21264152 + AT_rich Low_complexity Low_complexity 1 21 0 2867 16 0 0 chr5 181822070 181822385 -21263147 - AluYb8 SINE Alu -3 315 1 239 309 26 113 chr5 181824192 181824422 -21261110 + L2 LINE L2 2968 3177 -95 328 333 75 0 chr5 181824552 181824672 -21260860 + MIR SINE MIR 17 145 -117 2316 67 10 13 chr5 181824931 181825231 -21260301 - AluY SINE Alu -12 299 1 319 219 101 34 chr5 181825312 181825431 -21260101 + MLT1L LTR MaLR 105 231 -384 6182 100 7 9 chr5 181825434 181826699 -21258833 + L1PA13 LINE L1 4501 5763 -400 2515 57 0 3 chr5 181826699 181826997 -21258535 - AluY SINE Alu -14 297 1 6182 100 7 9 chr5 181826997 181827393 -21258139 + L1PA13 LINE L1 5763 6158 -5 309 151 0 0 chr5 181827713 181827766 -21257766 + (CA)n Simple_repeat Simple_repeat 2 54 0 2501 54 7 0 chr5 181827831 181828126 -21257406 - AluY SINE Alu -14 297 1 248 350 43 26 chr5 181828253 181828370 -21257162 - MIR SINE MIR -58 150 32 402 242 32 21 chr5 181828490 181828585 -21256947 + MIR SINE MIR 55 150 -58 549 258 159 7 chr5 181828764 181828915 -21256617 + MER5A DNA MER1_type 14 187 -2 214 306 20 31 chr5 181828915 181828972 -21256560 + MIR3 SINE MIR 152 207 -1 234 0 0 0 chr5 181829086 181829112 -21256420 + (TG)n Simple_repeat Simple_repeat 1 26 0 449 214 51 20 chr5 181829614 181829712 -21255820 + MIR SINE MIR 47 147 -61 209 380 127 0 chr5 181829758 181829900 -21255632 - MER5A DNA MER1_type -9 180 21 397 291 122 17 chr5 181830220 181830392 -21255140 + MIR3 SINE MIR 17 206 -2 285 352 97 5 chr5 181830744 181830934 -21254598 - MIR SINE MIR -34 228 24 22 70 0 0 chr5 181831651 181831694 -21253838 + AT_rich Low_complexity Low_complexity 1 43 0 182 118 29 0 chr5 181831734 181831768 -21253764 + CT-rich Low_complexity Low_complexity 2 36 0 300 137 0 0 chr5 181831773 181831824 -21253708 + (TTCC)n Simple_repeat Simple_repeat 3 53 0 186 86 171 0 chr5 181832522 181832557 -21252975 + MIR SINE MIR 124 164 -98 799 166 101 0 chr5 181832733 181832902 -21252630 - L1MA4 LINE L1 -5 6295 6110 243 198 12 23 chr5 181833566 181833652 -21251880 + CT-rich Low_complexity Low_complexity 3 87 0 1963 134 0 14 chr5 181833678 181833968 -21251564 - AluSx SINE Alu -13 299 14 418 241 0 11 chr5 181834271 181834394 -21251138 + L1MA4A LINE L1 6032 6279 -2 22 35 0 0 chr5 181834796 181834825 -21250707 + AT_rich Low_complexity Low_complexity 1 29 0 234 269 70 19 chr5 181834828 181834984 -21250548 + L1ME4a LINE L1 5274 5437 -2558 21 36 0 0 chr5 181835277 181835305 -21250227 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 181836196 181836217 -21249315 + AT_rich Low_complexity Low_complexity 1 21 0 564 290 90 88 chr5 181836346 181837446 -21248086 - L1M4 LINE L1 -2157 3989 2888 505 292 74 30 chr5 181837507 181837843 -21247689 - L1M4 LINE L1 -3623 2523 2173 245 371 74 17 chr5 181838054 181838229 -21247303 - MER5A DNA MER1_type -4 185 1 366 298 79 54 chr5 181838448 181838854 -21246678 - HAL1b LINE L1 -567 781 366 28 29 0 0 chr5 181838955 181838990 -21246542 + AT_rich Low_complexity Low_complexity 1 35 0 245 341 156 0 chr5 181839271 181839438 -21246094 + MIR SINE MIR 66 258 -4 1654 184 7 0 chr5 181839454 181839736 -21245796 - AluJb SINE Alu -26 286 3 22 94 0 0 chr5 181840150 181840214 -21245318 + AT_rich Low_complexity Low_complexity 1 64 0 2064 102 14 7 chr5 181840230 181840525 -21245007 - AluSx SINE Alu -15 297 1 201 239 0 22 chr5 181840977 181841023 -21244509 + (TG)n Simple_repeat Simple_repeat 2 46 0 374 293 62 56 chr5 181841030 181841334 -21244198 + L1ME4a LINE L1 5520 5825 -296 470 345 63 9 chr5 181841600 181841823 -21243709 - MIR SINE MIR 0 262 28 272 101 94 0 chr5 181843155 181843293 -21242239 + (CA)n Simple_repeat Simple_repeat 2 152 0 23 88 0 0 chr5 181843933 181843967 -21241565 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr5 181847121 181847150 -21238382 + AT_rich Low_complexity Low_complexity 1 29 0 429 391 13 17 chr5 181848419 181848654 -21236878 + L3 LINE CR1 510 743 -834 387 0 0 0 chr5 181849129 181849172 -21236360 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 184 0 0 chr5 181849457 181849506 -21236026 + T-rich Low_complexity Low_complexity 1 49 0 188 286 65 39 chr5 181849566 181849643 -21235889 + MIR3 SINE MIR 76 154 -54 761 201 0 18 chr5 181850824 181850988 -21234544 + MER3 DNA MER1_type 7 167 -42 201 195 24 49 chr5 181850991 181851073 -21234459 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 352 266 83 47 chr5 181851124 181851316 -21234216 + L1ME4a LINE L1 5712 5910 -211 889 219 5 5 chr5 181851620 181851807 -21233725 + MER5A DNA MER1_type 1 187 -2 429 223 223 22 chr5 181851822 181851961 -21233571 - MER5B DNA MER1_type -6 172 6 548 273 149 72 chr5 181852549 181852704 -21232828 - LTR67 LTR ERVL -165 392 250 1686 91 0 13 chr5 181852704 181852974 -21232558 - AluSc SINE Alu 0 309 68 548 273 149 72 chr5 181852974 181853181 -21232351 - LTR67 LTR ERVL -307 250 2 263 337 79 11 chr5 181853271 181853360 -21232172 + MIR SINE MIR 1 95 -167 288 292 21 10 chr5 181853370 181853466 -21232066 + LTR67 LTR ERVL 102 198 -359 510 309 26 21 chr5 181853787 181853978 -21231554 + MIR SINE MIR 71 262 0 22 0 0 0 chr5 181855121 181855143 -21230389 + AT_rich Low_complexity Low_complexity 1 22 0 517 329 83 12 chr5 181855143 181855383 -21230149 - MIR SINE MIR -2 260 4 675 261 0 12 chr5 181855521 181855686 -21229846 - MER20 DNA MER1_type -56 163 1 219 69 0 0 chr5 181856020 181856049 -21229483 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 707 227 11 11 chr5 181856781 181856957 -21228575 + MER5B DNA MER1_type 3 178 0 599 246 92 46 chr5 181857054 181857338 -21228194 - MER113 DNA MER1_type? -53 468 172 220 358 18 28 chr5 181857501 181857610 -21227922 + MIR SINE MIR 39 146 -62 568 123 28 9 chr5 181858682 181858788 -21226744 + AluY SINE Alu 1 108 -203 1906 268 86 19 chr5 181859185 181860234 -21225298 - L1M4 LINE L1 -2742 3404 2286 351 254 28 0 chr5 181860379 181860450 -21225082 + MER58 DNA MER1_type 6 78 -308 28 0 0 0 chr5 181860707 181860735 -21224797 + AT_rich Low_complexity Low_complexity 1 28 0 215 339 231 4 chr5 181860747 181861007 -21224525 - L3 LINE CR1 -771 806 488 775 251 112 9 chr5 181861075 181861298 -21224234 - MIR SINE MIR -3 259 14 546 219 102 0 chr5 181861683 181861811 -21223721 + MER45A DNA AcHobo 38 178 0 1644 173 25 74 chr5 181863106 181863539 -21221993 - L1MD3 LINE L1 -8 7987 7576 236 268 37 24 chr5 181863849 181863931 -21221601 - MIR SINE MIR -106 156 74 231 211 18 18 chr5 181864154 181864211 -21221321 + CT-rich Low_complexity Low_complexity 2 58 0 269 68 23 0 chr5 181864211 181864255 -21221277 + (CA)n Simple_repeat Simple_repeat 2 46 0 711 47 0 19 chr5 181864728 181864834 -21220698 + AluYa5/8 SINE Alu 204 307 -4 268 289 11 22 chr5 181865269 181865359 -21220173 - MIR SINE MIR -169 93 5 270 322 169 0 chr5 181865870 181865988 -21219544 - L2 LINE L2 -1 3271 3134 729 286 195 18 chr5 181866103 181866690 -21218842 + L2 LINE L2 2636 3313 0 277 342 75 0 chr5 181869545 181869665 -21215867 - MIR SINE MIR -30 232 104 304 188 83 52 chr5 181870145 181870241 -21215291 - L2 LINE L2 -1 3312 3214 1784 157 17 11 chr5 181871149 181871436 -21214096 + AluJo SINE Alu 1 289 -23 256 265 8 111 chr5 181872079 181872196 -21213336 - MER5B DNA MER1_type -72 106 2 184 243 0 54 chr5 181872245 181872319 -21213213 - MIR SINE MIR -13 249 180 190 291 36 0 chr5 181872772 181872827 -21212705 + L2 LINE L2 3256 3312 -1 268 260 91 0 chr5 181872923 181873000 -21212532 + L2 LINE L2 3229 3312 -1 304 275 72 58 chr5 181873080 181873218 -21212314 + MIR SINE MIR 97 236 -26 303 28 0 0 chr5 181874437 181874473 -21211059 + (TA)n Simple_repeat Simple_repeat 1 36 0 207 263 70 0 chr5 181875645 181875702 -21209830 - MIR SINE MIR -1 261 201 439 276 221 0 chr5 181875844 181875989 -21209543 - MER5A DNA MER1_type 0 189 13 4939 73 4 12 chr5 181876479 181877163 -21208369 + L1PA7 LINE L1 5476 6154 0 418 261 111 20 chr5 181879022 181879175 -21206357 - MIR SINE MIR -5 257 91 587 210 84 7 chr5 181879325 181879468 -21206064 + MLT1H LTR MaLR 59 212 -337 357 274 59 46 chr5 181879555 181879708 -21205824 + MLT1H LTR MaLR 387 541 -8 333 324 0 37 chr5 181879884 181879992 -21205540 + MIR SINE MIR 38 141 -67 1702 220 48 16 chr5 181880008 181880513 -21205019 - Charlie1b DNA MER1_type 0 523 3 30 59 0 0 chr5 181880546 181880597 -21204935 + AT_rich Low_complexity Low_complexity 1 51 0 28 48 0 0 chr5 181880693 181880735 -21204797 + AT_rich Low_complexity Low_complexity 1 42 0 1503 239 66 82 chr5 181881329 181881901 -21203631 + MLT1F1 LTR MaLR 1 563 -4 2516 183 51 0 chr5 181881904 181882452 -21203080 + L1MA8 LINE L1 3938 4513 -1633 2044 162 66 32 chr5 181882460 181882977 -21202555 + MLT2A2 LTR ERVL 3 540 -14 5832 180 26 35 chr5 181882983 181884831 -21200701 + L1MA8 LINE L1 4517 6285 -6 198 250 91 45 chr5 181884970 181885058 -21200474 + MIR SINE MIR 133 224 -38 22 0 0 0 chr5 181885109 181885131 -21200401 + AT_rich Low_complexity Low_complexity 1 22 0 312 320 170 13 chr5 181886097 181886250 -21199282 - MER5A DNA MER1_type 0 189 13 554 270 124 67 chr5 181886465 181886795 -21198737 + L2 LINE L2 2505 2853 -461 337 152 30 0 chr5 181886821 181886887 -21198645 + MADE1 DNA Mariner 13 80 0 618 308 94 35 chr5 181886890 181887263 -21198269 + L2 LINE L2 2846 3240 -73 180 109 76 22 chr5 181887267 181887359 -21198173 + (TA)n Simple_repeat Simple_repeat 2 98 0 238 183 32 32 chr5 181887398 181887491 -21198041 + (CATATA)n Simple_repeat Simple_repeat 3 95 0 454 231 0 136 chr5 181888895 181889094 -21196438 - L2 LINE L2 -8 3305 3134 432 286 118 42 chr5 181889336 181889574 -21195958 + HAL1 LINE L1 842 1097 -1410 22 35 0 0 chr5 181889582 181889611 -21195921 + AT_rich Low_complexity Low_complexity 1 29 0 207 171 0 0 chr5 181890298 181890333 -21195199 + (CA)n Simple_repeat Simple_repeat 1 35 0 532 281 174 82 chr5 181890704 181891153 -21194379 - L3 LINE CR1 -34 1543 1054 190 306 20 0 chr5 181891267 181891316 -21194216 - MIR SINE MIR -66 142 93 21 36 0 0 chr5 181892324 181892352 -21193180 + AT_rich Low_complexity Low_complexity 1 28 0 325 324 75 29 chr5 181892364 181892537 -21192995 - MIR SINE MIR -13 249 69 988 171 32 93 chr5 181893926 181894172 -21191360 + MER46A DNA MER2_type 5 235 -1 296 359 0 9 chr5 181894201 181894307 -21191225 + L2 LINE L2 3209 3313 0 212 236 0 37 chr5 181894484 181894646 -21190886 + GA-rich Low_complexity Low_complexity 1 156 0 336 284 57 35 chr5 181895021 181895162 -21190370 + MIR SINE MIR 65 208 -54 183 211 35 35 chr5 181895284 181895341 -21190191 + MIR SINE MIR 156 212 -50 309 26 0 0 chr5 181896201 181896239 -21189293 + (CA)n Simple_repeat Simple_repeat 1 38 0 181 250 0 58 chr5 181897848 181897900 -21187632 - L2 LINE L2 -30 3283 3235 446 302 113 50 chr5 181898182 181898728 -21186804 + L2 LINE L2 2507 3161 -152 737 199 27 7 chr5 181898728 181898874 -21186658 - FRAM SINE Alu -14 152 4 446 302 113 50 chr5 181898874 181898955 -21186577 + L2 LINE L2 3161 3235 -78 22 0 0 0 chr5 181898983 181899005 -21186527 + AT_rich Low_complexity Low_complexity 1 22 0 5072 160 8 20 chr5 181899167 181899343 -21186189 + L1PB4 LINE L1 5172 5349 -807 1788 175 0 9 chr5 181899343 181899658 -21185874 + AluJb SINE Alu 1 312 0 5072 160 8 20 chr5 181899658 181900470 -21185062 + L1PB4 LINE L1 5349 6154 -2 322 311 68 11 chr5 181900874 181901064 -21184468 + LTR33 LTR ERVL 3 203 -318 216 333 14 0 chr5 181901655 181901724 -21183808 + L2 LINE L2 3207 3276 -37 43 35 0 0 chr5 181901736 181901793 -21183739 + AT_rich Low_complexity Low_complexity 1 57 0 2131 124 3 9 chr5 181902615 181902930 -21182602 - AluSq SINE Alu 0 313 1 1327 210 0 34 chr5 181902972 181903267 -21182265 - AluJb SINE Alu -27 285 1 216 0 0 0 chr5 181904481 181904505 -21181027 + (CA)n Simple_repeat Simple_repeat 1 24 0 214 306 20 31 chr5 181904619 181904676 -21180856 - MIR3 SINE MIR -1 207 152 549 258 159 7 chr5 181904676 181904827 -21180705 - MER5A DNA MER1_type -2 187 14 402 242 32 21 chr5 181905005 181905100 -21180432 - MIR SINE MIR -58 150 55 248 350 43 26 chr5 181905220 181905337 -21180195 + MIR SINE MIR 32 150 -58 2505 57 7 0 chr5 181905464 181905765 -21179767 + AluY SINE Alu 1 303 -8 24 32 0 0 chr5 181905953 181905984 -21179548 + AT_rich Low_complexity Low_complexity 1 31 0 790 247 101 18 chr5 181906309 181906536 -21178996 - MIR SINE MIR -2 260 15 1218 192 21 11 chr5 181907496 181907777 -21177755 + L1 LINE L1 4949 5232 -914 31 48 0 16 chr5 181907917 181907940 -21177592 + AT_rich Low_complexity Low_complexity 1 23 -39 1166 134 138 60 chr5 181907940 181908208 -21177324 + AluJb SINE Alu 1 289 -13 31 48 0 16 chr5 181908208 181908247 -21177285 + AT_rich Low_complexity Low_complexity 23 62 0 450 0 0 0 chr5 181908767 181908817 -21176715 + (CA)n Simple_repeat Simple_repeat 2 51 0 309 289 24 0 chr5 181908820 181908903 -21176629 - MIR SINE MIR -1 261 177 329 399 0 0 chr5 181909005 181909143 -21176389 + L2 LINE L2 3166 3303 -10 195 204 0 41 chr5 181910195 181910244 -21175288 + L2 LINE L2 3226 3272 0 772 176 0 0 chr5 181910714 181910839 -21174693 + AluSg/x SINE Alu 138 262 -50 197 222 16 0 chr5 181910839 181910902 -21174630 + (TA)n Simple_repeat Simple_repeat 1 64 0 377 219 70 59 chr5 181910986 181911058 -21174474 + L1MC5 LINE L1 7738 7808 -153 795 202 74 49 chr5 181911058 181911261 -21174271 + MER3 DNA MER1_type 2 209 0 377 219 70 59 chr5 181911261 181911375 -21174157 + L1MC5 LINE L1 7808 7926 -35 956 188 16 0 chr5 181911395 181911581 -21173951 + L1MA9 LINE L1 5894 6082 -230 527 191 0 0 chr5 181911583 181911693 -21173839 + L1MA9 LINE L1 6181 6290 -22 380 339 90 21 chr5 181912813 181913046 -21172486 - MIR SINE MIR -11 251 3 568 299 104 14 chr5 181913448 181913659 -21171873 - MIR SINE MIR -12 250 21 289 315 0 33 chr5 181914605 181914697 -21170835 + MER5A DNA MER1_type 42 130 -59 400 267 121 24 chr5 181916456 181916621 -21168911 - MIR SINE MIR -9 253 73 205 241 62 0 chr5 181916784 181916896 -21168636 + (TA)n Simple_repeat Simple_repeat 1 119 0 229 191 0 0 chr5 181918899 181918946 -21166586 + (CAT)n Simple_repeat Simple_repeat 2 48 0 384 313 148 13 chr5 181918950 181919180 -21166352 - MIR SINE MIR -1 261 1 466 343 37 5 chr5 181919237 181919453 -21166079 - MER102b DNA MER1_type -1 340 118 190 268 0 0 chr5 181919561 181919602 -21165930 - L2 LINE L2 -2 3311 3271 189 250 0 69 chr5 181919578 181919650 -21165882 - L2 LINE L2 -217 3055 2989 * 681 337 62 35 chr5 181919860 181920234 -21165298 - L2 LINE L2 0 3313 2930 659 276 169 30 chr5 181920240 181920577 -21164955 - L2 LINE L2 -678 2636 2253 2117 105 3 3 chr5 181920577 181920901 -21164631 + AluSp SINE Alu 1 324 0 483 298 128 43 chr5 181921942 181922177 -21163355 + MIR SINE MIR 8 262 0 451 233 74 107 chr5 181922439 181922710 -21162822 - Charlie8 DNA MER1_type -2131 286 25 1796 164 0 26 chr5 181922798 181923103 -21162429 + AluJb SINE Alu 4 300 -12 354 98 0 0 chr5 181925269 181925320 -21160212 + (TC)n Simple_repeat Simple_repeat 2 52 0 225 300 132 53 chr5 181926141 181926331 -21159201 + L2 LINE L2 2431 2635 -679 275 274 288 0 chr5 181926346 181926492 -21159040 - MER102b DNA MER1_type -19 322 135 306 0 0 0 chr5 181926870 181926904 -21158628 + (TG)n Simple_repeat Simple_repeat 2 35 0 309 208 19 104 chr5 181927604 181927710 -21157822 - MIR SINE MIR 0 262 166 2008 119 0 7 chr5 181928051 181928357 -21157175 - AluSx SINE Alu 0 304 1 346 331 39 16 chr5 181929304 181929431 -21156101 + MIR SINE MIR 59 188 -74 327 140 11 54 chr5 181929770 181929863 -21155669 + L1MA5A LINE L1 6196 6284 -13 30 27 0 0 chr5 181930487 181930524 -21155008 + AT_rich Low_complexity Low_complexity 1 37 0 343 261 54 0 chr5 181930871 181930963 -21154569 - L2 LINE L2 0 3313 3217 1206 123 0 0 chr5 181931607 181931778 -21153754 - AluJo SINE Alu -13 299 129 7124 53 9 0 chr5 181931791 181932868 -21152664 - L1PA7 LINE L1 -6 6148 5070 4225 98 2 3 chr5 181932868 181933481 -21152051 + L1PA7 LINE L1 4473 5084 -1062 497 222 0 0 chr5 181933482 181933581 -21151951 - AluJo SINE Alu -176 136 38 588 226 102 96 chr5 181933743 181934283 -21151249 - L1MC5 LINE L1 -30 7931 7389 548 200 0 17 chr5 181934290 181934405 -21151127 - FRAM SINE Alu -4 172 60 1133 227 93 94 chr5 181934599 181935203 -21150329 - L1MC5 LINE L1 -722 7239 6637 1987 119 0 10 chr5 181935235 181935528 -21150004 - AluSc SINE Alu -19 290 1 243 0 0 0 chr5 181935861 181935888 -21149644 + (TG)n Simple_repeat Simple_repeat 2 28 0 1365 233 124 16 chr5 181936396 181936839 -21148693 + L2 LINE L2 1202 1692 -1622 230 217 89 178 chr5 181988061 181988218 -21097314 + MIR SINE MIR 50 192 -70 23 33 0 0 chr5 181990465 181990495 -21095037 + AT_rich Low_complexity Low_complexity 1 30 0 465 308 33 33 chr5 181990495 181990709 -21094823 + MIR SINE MIR 49 262 0 254 180 16 0 chr5 181990822 181990883 -21094649 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 277 256 77 43 chr5 181991049 181991166 -21094366 + MER5A DNA MER1_type 69 189 0 22 35 0 0 chr5 181991885 181991914 -21093618 + AT_rich Low_complexity Low_complexity 1 29 0 990 222 28 0 chr5 181992748 181992960 -21092572 + MER20 DNA MER1_type 2 219 0 23 33 0 0 chr5 181993946 181993976 -21091556 + AT_rich Low_complexity Low_complexity 1 30 0 537 230 112 6 chr5 181994187 181994348 -21091184 + MIR SINE MIR 69 246 -16 1769 174 53 53 chr5 181994356 181994788 -21090744 + MSTB1 LTR MaLR 1 432 0 212 214 14 57 chr5 181994860 181994930 -21090602 + GA-rich Low_complexity Low_complexity 6 72 0 2184 87 0 4 chr5 181995232 181995507 -21090025 - AluSx SINE Alu -36 276 3 518 349 88 45 chr5 181995527 181996120 -21089412 + L2 LINE L2 1801 2418 -896 1865 162 10 10 chr5 181997153 181997450 -21088082 + AluJb SINE Alu 3 299 -13 427 304 26 0 chr5 181997458 181997573 -21087959 + L2 LINE L2 3150 3267 -5 13599 130 33 29 chr5 181998320 181999450 -21086082 - Tigger1 DNA MER2_type -1 2417 1293 1761 178 4 0 chr5 181999450 181999755 -21085777 - AluJb SINE Alu 0 308 3 13599 130 33 29 chr5 181999755 182001029 -21084503 - Tigger1 DNA MER2_type -1125 1293 2 21 36 0 0 chr5 182004039 182004067 -21081465 + AT_rich Low_complexity Low_complexity 1 28 0 212 184 0 0 chr5 182005414 182005452 -21080080 + A-rich Low_complexity Low_complexity 1 38 0 212 308 0 0 chr5 182005806 182005884 -21079648 + G-rich Low_complexity Low_complexity 1 78 0 464 297 176 9 chr5 182007146 182007368 -21078164 - MIR SINE MIR 0 262 4 201 74 0 0 chr5 182007941 182007968 -21077564 + (CA)n Simple_repeat Simple_repeat 1 27 0 213 39 0 0 chr5 182008415 182008441 -21077091 + (TAA)n Simple_repeat Simple_repeat 3 28 0 478 322 59 29 chr5 182008550 182008789 -21076743 + MIR SINE MIR 4 249 -13 8415 102 5 2 chr5 182008878 182010885 -21074647 - L1PA7 LINE L1 -8 6146 4142 2145 104 3 10 chr5 182011087 182011385 -21074147 + AluSc SINE Alu 1 296 -13 6103 34 0 1 chr5 182011752 182012483 -21073049 - L1PA4 LINE L1 -3 6152 5423 804 307 149 3 chr5 182012924 182013292 -21072240 - L2 LINE L2 -647 2667 2246 254 315 91 47 chr5 182013297 182013529 -21072003 + L2 LINE L2 3072 3313 0 242 302 58 12 chr5 182013680 182013766 -21071766 - L2 LINE L2 -1258 2056 1967 23 0 0 0 chr5 182014405 182014428 -21071104 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 182014705 182014732 -21070800 + AT_rich Low_complexity Low_complexity 1 27 0 361 286 136 25 chr5 182014743 182014918 -21070614 - MIR SINE MIR -41 221 39 32 43 0 0 chr5 182015679 182015725 -21069807 + AT_rich Low_complexity Low_complexity 1 46 0 357 321 204 29 chr5 182016202 182016688 -21068844 - MLT1K LTR MaLR -16 572 2 1762 162 38 38 chr5 182017227 182017598 -21067934 + THE1C LTR MaLR 1 371 -4 23 68 0 0 chr5 182017678 182017722 -21067810 + AT_rich Low_complexity Low_complexity 1 44 0 2368 92 0 22 chr5 182017750 182018067 -21067465 + AluSg SINE Alu 1 310 0 196 211 118 0 chr5 182018106 182018182 -21067350 - MIR SINE MIR -44 218 134 32 43 0 0 chr5 182020119 182020165 -21065367 + AT_rich Low_complexity Low_complexity 1 46 0 360 311 0 10 chr5 182020813 182020916 -21064616 + MIR3 SINE MIR 97 198 -10 601 204 58 7 chr5 182020922 182021059 -21064473 + MER58A DNA MER1_type 1 144 0 659 226 28 51 chr5 182021073 182021250 -21064282 - MIR SINE MIR -88 174 2 2310 112 3 0 chr5 182022008 182022320 -21063212 - AluSq SINE Alu 0 313 1 259 274 0 0 chr5 182022538 182022611 -21062921 + CT-rich Low_complexity Low_complexity 2 74 0 353 238 159 33 chr5 182022645 182022796 -21062736 - MIR SINE MIR -19 243 74 222 152 0 22 chr5 182024122 182024168 -21061364 + A-rich Low_complexity Low_complexity 3 47 0 1733 156 0 33 chr5 182024383 182024659 -21060873 - AluJb SINE Alu -45 267 1 463 304 207 15 chr5 182024791 182025120 -21060412 + L2 LINE L2 2816 3207 -106 1725 152 73 22 chr5 182025143 182025499 -21060033 + THE1C LTR MaLR 2 375 0 281 321 76 114 chr5 182025989 182026410 -21059122 - L2 LINE L2 -8 3264 2860 260 320 57 41 chr5 182026849 182026971 -21058561 + MIR SINE MIR 27 150 -112 394 245 10 10 chr5 182027201 182027303 -21058229 - MER5B DNA MER1_type -76 102 1 222 375 49 31 chr5 182027786 182028010 -21057522 + L2 LINE L2 2685 2912 -402 371 267 161 31 chr5 182028033 182028194 -21057338 - MER5A DNA MER1_type 0 189 8 288 0 0 0 chr5 182030243 182030275 -21055257 + (TA)n Simple_repeat Simple_repeat 2 33 0 461 356 102 28 chr5 182031051 182031405 -21054127 + L2 LINE L2 2934 3313 0 441 274 141 28 chr5 182031565 182031855 -21053677 - LTR16A1 LTR ERVL -1 456 126 211 368 0 0 chr5 182032084 182032152 -21053380 - MIR3 SINE MIR -49 159 92 749 363 58 31 chr5 182032530 182033045 -21052487 - L2 LINE L2 -5 3308 2770 2435 261 38 9 chr5 182033109 182033209 -21052323 + L1ME2 LINE L1 4356 4452 -1694 288 0 0 0 chr5 182033209 182033241 -21052291 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2435 261 38 9 chr5 182033241 182033956 -21051576 + L1ME2 LINE L1 4452 5195 -951 3958 200 60 41 chr5 182033957 182034984 -21050548 + L1MC3 LINE L1 6721 7767 -18 1450 241 35 23 chr5 182035005 182035440 -21050092 + L1ME2 LINE L1 5715 6154 -10 500 325 30 5 chr5 182035457 182035654 -21049878 - L2 LINE L2 -609 2705 2504 219 397 22 15 chr5 182035686 182035822 -21049710 + MIR3 SINE MIR 19 155 -53 366 23 0 0 chr5 182036504 182036547 -21048985 + (CA)n Simple_repeat Simple_repeat 1 43 0 197 274 0 0 chr5 182037153 182037204 -21048328 - L2 LINE L2 -1 3312 3262 2170 135 35 22 chr5 182037883 182038253 -21047279 - THE1C LTR MaLR 0 375 1 221 231 0 0 chr5 182038755 182038794 -21046738 + L2 LINE L2 3252 3290 -23 211 231 0 0 chr5 182038764 182038803 -21046729 + MIR SINE MIR 216 254 -8 * 306 156 0 0 chr5 182039520 182039584 -21045948 + A-rich Low_complexity Low_complexity 1 64 0 723 147 140 0 chr5 182039925 182040068 -21045464 - FAM SINE Alu -11 164 2 330 281 95 45 chr5 182041079 182041163 -21044369 - MIR SINE MIR -1 261 183 877 268 87 48 chr5 182041163 182041555 -21043977 + MLT1I LTR MaLR 1 407 -2 330 281 95 45 chr5 182041555 182041712 -21043820 - MIR SINE MIR -79 183 8 400 216 30 123 chr5 182041877 182042074 -21043458 - MIR SINE MIR -50 212 34 1503 208 27 3 chr5 182042388 182042686 -21042846 + AluJb SINE Alu 3 307 -5 340 244 6 6 chr5 182043759 182043935 -21041597 + (TA)n Simple_repeat Simple_repeat 1 176 0 351 281 44 31 chr5 182044218 182044378 -21041154 - MIR SINE MIR -67 195 34 186 43 0 0 chr5 182044402 182044425 -21041107 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 755 287 82 25 chr5 182044603 182045042 -21040490 + L1ME2 LINE L1 301 764 -5306 577 189 0 0 chr5 182045080 182045175 -21040357 + AluJb SINE Alu 173 267 -45 888 288 67 54 chr5 182045176 182045768 -21039764 + L1ME2 LINE L1 823 1431 -4649 2225 109 7 0 chr5 182045768 182046071 -21039461 + AluSx SINE Alu 1 305 -7 888 288 67 54 chr5 182046071 182046314 -21039218 + L1ME2 LINE L1 1431 1669 -4411 * 3314 160 34 39 chr5 182046270 182047202 -21038330 - L1PA16 LINE L1 -248 5918 4992 18726 48 3 0 chr5 182047204 182050338 -21035194 - L1PA5 LINE L1 0 6154 3015 2853 223 38 33 chr5 182050718 182051455 -21034077 - L1ME2 LINE L1 -32 6132 5392 9211 235 24 9 chr5 182051561 182053617 -21031915 - L1 LINE L1 -1193 4953 2852 193 29 29 29 chr5 182053617 182053652 -21031880 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9211 235 24 9 chr5 182053652 182054067 -21031465 - L1 LINE L1 -3294 2852 2445 692 208 19 0 chr5 182054315 182054469 -21031063 - L1 LINE L1 -3683 2463 2307 1183 244 34 3 chr5 182054472 182054796 -21030736 + L1ME2 LINE L1 2321 2654 -3426 285 171 122 0 chr5 182054816 182054898 -21030634 + L1ME2 LINE L1 2715 2806 -3274 2970 227 62 28 chr5 182054900 182054927 -21030605 + L1ME2 LINE L1 5112 5137 -961 1948 126 3 50 chr5 182054927 182055245 -21030287 + AluSx SINE Alu 1 303 -9 2970 227 62 28 chr5 182055245 182056139 -21029393 + L1ME2 LINE L1 5137 6066 -32 18761 48 3 0 chr5 182056519 182059647 -21025885 + L1PA5 LINE L1 3015 6153 -1 2364 221 81 51 chr5 182059850 182060156 -21025376 + L1MA9 LINE L1 5463 5758 -554 291 28 0 0 chr5 182060156 182060192 -21025340 + (CA)n Simple_repeat Simple_repeat 2 37 0 330 26 0 0 chr5 182060193 182060232 -21025300 + (TA)n Simple_repeat Simple_repeat 1 39 0 2364 221 81 51 chr5 182060232 182060711 -21024821 + L1MA9 LINE L1 5757 6274 -38 1913 219 52 7 chr5 182061632 182062070 -21023462 + MLT1C LTR MaLR 1 458 -9 1622 177 3 23 chr5 182062510 182062809 -21022723 - AluJo SINE Alu -19 293 1 24 32 0 0 chr5 182062962 182062993 -21022539 + AT_rich Low_complexity Low_complexity 1 31 0 277 309 0 0 chr5 182063162 182063230 -21022302 - MLT1K LTR MaLR -325 263 196 271 333 65 0 chr5 182063423 182063516 -21022016 - L2 LINE L2 -35 3237 3139 533 311 61 4 chr5 182064209 182064437 -21021095 + MIR SINE MIR 11 251 -11 31 0 0 0 chr5 182064738 182064769 -21020763 + AT_rich Low_complexity Low_complexity 1 31 0 1276 219 62 7 chr5 182065637 182065911 -21019621 - AluJo SINE Alu -21 291 3 24 53 0 0 chr5 182066290 182066328 -21019204 + AT_rich Low_complexity Low_complexity 1 38 0 230 319 80 22 chr5 182067450 182067676 -21017856 + L2 LINE L2 3009 3247 -66 360 103 0 0 chr5 182067804 182067862 -21017670 + (CA)n Simple_repeat Simple_repeat 2 59 0 33591 34 12 1 chr5 182067999 182074033 -21011499 - L1PA2 LINE L1 0 6155 1 21 0 0 0 chr5 182074141 182074162 -21011370 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 182074218 182074248 -21011284 + AT_rich Low_complexity Low_complexity 1 30 0 368 261 56 14 chr5 182074784 182074926 -21010606 - MER103 DNA DNA -9 157 10 252 177 0 0 chr5 182075137 182075186 -21010346 + MIR SINE MIR 71 120 -88 280 197 92 26 chr5 182075887 182075963 -21009569 + MIR SINE MIR 47 127 -81 422 291 153 20 chr5 182076474 182076670 -21008862 + MIR SINE MIR 30 251 -11 380 293 58 16 chr5 182077201 182077540 -21007992 + L1ME2 LINE L1 1331 1633 -5226 1210 254 63 47 chr5 182077629 182078185 -21007347 + LTR24B LTR ERV1 5 569 -7 660 295 92 72 chr5 182078195 182078282 -21007250 + L1ME2 LINE L1 1868 1952 -5186 761 160 25 0 chr5 182078282 182078401 -21007131 + FLAM_C SINE Alu 1 122 -11 660 295 92 72 chr5 182078401 182078855 -21006677 + L1ME2 LINE L1 1952 2420 -4718 756 294 93 7 chr5 182079031 182079470 -21006062 + L1ME2 LINE L1 2787 3263 -3875 748 276 84 27 chr5 182079478 182079830 -21005702 + L1ME2 LINE L1 3369 3762 -3195 1693 181 23 0 chr5 182079830 182079942 -21005590 + AluJo SINE Alu 3 111 -201 456 35 0 0 chr5 182079942 182080000 -21005532 + (CA)n Simple_repeat Simple_repeat 1 58 0 1693 181 23 0 chr5 182080000 182080190 -21005342 + AluJo SINE Alu 111 312 0 748 276 84 27 chr5 182080190 182080358 -21005174 + L1ME2 LINE L1 3762 3919 -3038 3883 173 38 36 chr5 182080384 182081204 -21004328 + L1MA6 LINE L1 4762 5588 -712 2059 119 3 16 chr5 182081204 182081516 -21004016 + AluSx SINE Alu 1 308 -4 3883 173 38 36 chr5 182081516 182082062 -21003470 + L1MA6 LINE L1 5588 6131 -169 1601 256 151 19 chr5 182082076 182083136 -21002396 + L1ME2 LINE L1 3974 5173 -1784 1984 178 50 33 chr5 182083139 182083676 -21001856 - MLT2A2 LTR ERVL -8 546 1 1310 259 92 45 chr5 182083676 182084057 -21001475 + L1ME2 LINE L1 5168 5530 -1427 2186 103 6 13 chr5 182084057 182084369 -21001163 + AluSg SINE Alu 1 310 0 1310 259 92 45 chr5 182084369 182084629 -21000903 + L1ME2 LINE L1 5530 5776 -1181 2370 68 7 0 chr5 182084629 182084925 -21000607 - AluY SINE Alu -13 298 1 1310 259 92 45 chr5 182084925 182085078 -21000454 + L1ME2 LINE L1 5776 5920 -1037 199 0 65 0 chr5 182085078 182085109 -21000423 + (TA)n Simple_repeat Simple_repeat 2 34 0 1310 259 92 45 chr5 182085109 182085221 -21000311 + L1ME2 LINE L1 5920 6119 -838 809 155 16 70 chr5 182085226 182085413 -21000119 + AluJb SINE Alu 129 305 -7 1946 234 116 73 chr5 182085437 182085611 -20999921 + L1ME2 LINE L1 6137 6302 -673 1863 82 8 0 chr5 182085611 182085867 -20999665 + L1PA7 LINE L1 5890 6147 -7 1946 234 116 73 chr5 182085867 182086488 -20999044 + L1ME2 LINE L1 6302 6966 -9 22 35 0 0 chr5 182086919 182086948 -20998584 + AT_rich Low_complexity Low_complexity 1 29 0 271 298 79 9 chr5 182087179 182087293 -20998239 + MER117 DNA MER1_type 45 166 -31 236 323 73 10 chr5 182087398 182087494 -20998038 + L2 LINE L2 3171 3272 0 243 250 0 50 chr5 182089494 182089574 -20995958 + CT-rich Low_complexity Low_complexity 5 80 0 511 219 16 23 chr5 182090212 182090340 -20995192 - MER58B DNA MER1_type -20 321 195 590 265 54 25 chr5 182090606 182090810 -20994722 - MIR SINE MIR -2 260 51 632 281 91 27 chr5 182091511 182091925 -20993607 + MLT1C LTR MaLR 26 467 0 500 333 73 29 chr5 182091935 182092177 -20993355 + MLT1K LTR MaLR 62 323 -265 243 0 0 0 chr5 182092177 182092204 -20993328 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 500 333 73 29 chr5 182092204 182092276 -20993256 + MLT1K LTR MaLR 323 390 -198 3347 146 50 47 chr5 182092635 182093418 -20992114 - LTR1 LTR ERV1 0 785 1 1352 179 13 83 chr5 182093638 182093960 -20991572 - AluJb SINE Alu 0 301 1 225 0 0 0 chr5 182094178 182094203 -20991329 + (T)n Simple_repeat Simple_repeat 1 25 0 479 80 0 28 chr5 182094348 182094551 -20990981 + AluY SINE Alu 37 302 -9 2357 66 0 3 chr5 182095496 182095797 -20989735 + AluY SINE Alu 1 300 -11 188 214 24 0 chr5 182095972 182096014 -20989518 - L2 LINE L2 -12 3260 3218 2249 99 9 15 chr5 182102067 182102399 -20983133 + THE1C-int LTR MaLR 1251 1580 0 1907 135 86 9 chr5 182102399 182102747 -20982785 + THE1C LTR MaLR 1 375 0 477 315 112 4 chr5 182102753 182103004 -20982528 + L2 LINE L2 1723 2000 -1314 694 312 43 93 chr5 182103005 182103663 -20981869 + L2 LINE L2 2322 2946 -368 2050 175 37 3 chr5 182104006 182104383 -20981149 - MLT1B LTR MaLR 0 390 1 2209 116 0 3 chr5 182105088 182105399 -20980133 + AluSg SINE Alu 1 310 0 779 326 31 23 chr5 182105831 182106181 -20979351 + MLT1K LTR MaLR 231 583 -5 2021 114 0 0 chr5 182106321 182106601 -20978931 - AluSx SINE Alu -2 310 31 2761 215 22 14 chr5 182106717 182107560 -20977972 - L1MC3 LINE L1 -643 7211 6190 25 31 0 0 chr5 182107567 182107599 -20977933 + AT_rich Low_complexity Low_complexity 1 32 0 1991 145 42 22 chr5 182107601 182107879 -20977653 - L1PB1 LINE L1 0 6151 5862 2029 111 0 44 chr5 182107879 182108223 -20977309 + AluSp SINE Alu 1 331 0 1991 145 42 22 chr5 182108223 182108302 -20977230 - L1PB1 LINE L1 -289 5862 5786 236 130 0 0 chr5 182108311 182108357 -20977175 - LTR66 LTR ERVL -171 439 394 261 210 0 0 chr5 182108377 182108439 -20977093 + (TA)n Simple_repeat Simple_repeat 2 63 0 223 154 31 0 chr5 182108456 182108521 -20977011 + (TA)n Simple_repeat Simple_repeat 2 68 0 228 159 0 0 chr5 182108525 182108569 -20976963 + LTR66 LTR ERVL 394 437 -173 3364 130 6 0 chr5 182108569 182109182 -20976350 - L1PB1 LINE L1 -384 5767 5152 394 275 22 14 chr5 182109179 182109317 -20976215 - L1MC3 LINE L1 -1662 6192 6054 * 374 202 32 0 chr5 182109330 182109424 -20976108 - L1MC3 LINE L1 0 7785 7689 825 184 48 6 chr5 182109439 182109607 -20975925 - L1MC3 LINE L1 -312 7473 7299 533 178 0 20 chr5 182109615 182109716 -20975816 - L1MC3 LINE L1 -1799 6055 5957 5142 203 26 18 chr5 182109725 182110635 -20974897 - L1MC1 LINE L1 -23 6310 5383 1931 147 29 27 chr5 182110635 182111009 -20974523 + THE1C LTR MaLR 1 375 0 5142 203 26 18 chr5 182111009 182111400 -20974132 - L1MC1 LINE L1 -950 5383 4996 1879 259 113 51 chr5 182111408 182113569 -20971963 - L1MC3 LINE L1 -745 5470 3703 8480 59 10 2 chr5 182113574 182114636 -20970896 - MER11C LTR ERVK 0 1071 1 321 278 67 61 chr5 182115610 182115970 -20969562 - L1MC3 LINE L1 -4954 1442 1081 22 0 0 0 chr5 182115987 182116009 -20969523 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr5 182116049 182116086 -20969446 + AT_rich Low_complexity Low_complexity 1 37 0 9693 149 13 1 chr5 182116188 182118615 -20966917 + L1PA10 LINE L1 3709 6163 -5 24 32 0 0 chr5 182118616 182118647 -20966885 + AT_rich Low_complexity Low_complexity 1 31 0 7156 269 87 24 chr5 182118647 182120673 -20964859 + L1MB7 LINE L1 1042 2940 -3442 1649 95 28 0 chr5 182120673 182120926 -20964606 + L1MA4A LINE L1 6044 6303 0 7156 269 87 24 chr5 182120926 182122673 -20962859 + L1MB7 LINE L1 2940 5054 -1328 2598 162 34 6 chr5 182122692 182123160 -20962372 + MER52A LTR ERV1 1275 1755 0 242 218 127 55 chr5 182123160 182123270 -20962262 - Charlie7 DNA MER1_type 0 2612 2495 2137 225 44 22 chr5 182123328 182124314 -20961218 + L1MB7 LINE L1 5060 6057 -363 3230 212 53 3 chr5 182124325 182125043 -20960489 + L1MC3 LINE L1 7015 7768 -17 1399 206 29 42 chr5 182125042 182125420 -20960112 + L1MB7 LINE L1 6048 6420 0 * 201 124 90 22 chr5 182125529 182125618 -20959914 + (TTTAA)n Simple_repeat Simple_repeat 1 95 0 236 337 166 20 chr5 182126894 182127093 -20958439 - L2 LINE L2 -2506 808 581 267 352 11 0 chr5 182127152 182127240 -20958292 + MLT1I LTR MaLR 1 89 -320 386 331 76 0 chr5 182127309 182127481 -20958051 - MIR SINE MIR 0 262 78 1675 249 48 24 chr5 182127530 182128031 -20957501 + MLT2B1 LTR ERVL 8 520 0 24 0 0 0 chr5 182128212 182128236 -20957296 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 182128407 182128428 -20957104 + AT_rich Low_complexity Low_complexity 1 21 0 1003 88 15 0 chr5 182129152 182129289 -20956243 + L1PA10 LINE L1 6027 6165 -3 383 78 16 0 chr5 182129312 182129376 -20956156 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 183 271 0 0 chr5 182129720 182129779 -20955753 + (TA)n Simple_repeat Simple_repeat 2 60 0 3752 19 0 0 chr5 182129872 182130305 -20955227 + L1PA3 LINE L1 5720 6152 -3 21 82 0 0 chr5 182131556 182131605 -20953927 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr5 182132241 182132265 -20953267 + AT_rich Low_complexity Low_complexity 1 24 0 729 272 131 29 chr5 182132323 182132635 -20952897 - LTR16A LTR ERVL -10 440 97 1479 234 30 33 chr5 182132847 182133244 -20952288 - MSTD LTR MaLR 0 396 1 2521 57 0 0 chr5 182133372 182133671 -20951861 + AluY SINE Alu 1 299 -12 594 305 48 14 chr5 182133755 182133965 -20951567 - MIR SINE MIR -31 231 15 4950 95 15 7 chr5 182134226 182134950 -20950582 - L1PA13 LINE L1 -5 6158 5429 2123 254 105 13 chr5 182134980 182135824 -20949708 + L1ME1 LINE L1 5124 6036 -130 317 273 112 53 chr5 182135913 182136100 -20949432 + Charlie8 DNA MER1_type 88 285 -2132 261 133 20 23 chr5 182137270 182137327 -20948205 + MLT1J LTR MaLR 63 156 -332 279 140 0 0 chr5 182138900 182138950 -20946582 + (ATG)n Simple_repeat Simple_repeat 2 51 0 200 324 174 6 chr5 182138957 182139132 -20946400 - MIR SINE MIR -14 248 36 185 365 166 19 chr5 182139351 182139562 -20945970 + L2 LINE L2 2819 3060 -212 265 311 149 6 chr5 182140196 182140357 -20945175 + MIR SINE MIR 75 258 -4 2249 89 14 0 chr5 182140628 182140919 -20944613 + AluSc SINE Alu 1 295 -14 363 339 32 48 chr5 182140937 182141126 -20944406 - L3 LINE CR1 -106 1471 1286 * 424 336 109 9 chr5 182141103 182141314 -20944218 + MIR SINE MIR 31 262 0 202 297 94 0 chr5 182141456 182141520 -20944012 - MIR3 SINE MIR -42 166 97 225 350 52 9 chr5 182141682 182141791 -20943741 + MIR SINE MIR 37 154 -85 337 349 30 18 chr5 182143149 182143318 -20942214 + MER20B DNA MER1_type 6 176 -607 576 188 38 38 chr5 182143841 182143974 -20941558 - MER20 DNA MER1_type 0 219 87 191 295 189 11 chr5 182144762 182144857 -20940675 - MIR3 SINE MIR -22 186 75 5745 89 48 9 chr5 182145106 182146035 -20939497 + L1PA10 LINE L1 5201 6163 -5 212 358 108 20 chr5 182146164 182146312 -20939220 + L3 LINE CR1 806 966 -611 232 374 129 0 chr5 182146318 182146457 -20939075 + L3 LINE CR1 1121 1277 -300 250 59 103 0 chr5 182146713 182146781 -20938751 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 21 57 0 0 chr5 182146781 182146816 -20938716 + AT_rich Low_complexity Low_complexity 1 35 0 53 0 0 0 chr5 182146847 182146900 -20938632 + AT_rich Low_complexity Low_complexity 1 53 0 380 169 0 0 chr5 182247917 182248008 -20837524 + AluJ/FRAM SINE Alu 226 316 0 255 257 46 64 chr5 182248613 182248722 -20836810 - MIR3 SINE MIR -1 207 101 215 360 12 47 chr5 182249019 182249191 -20836341 - MIR SINE MIR -50 212 47 365 319 9 18 chr5 182250545 182250658 -20834874 - MIR SINE MIR -119 143 32 819 201 6 30 chr5 182250898 182251067 -20834465 + MER20 DNA MER1_type 54 218 -1 214 276 17 17 chr5 182251468 182251526 -20834006 - MER5A DNA MER1_type -93 96 39 206 342 153 0 chr5 182251547 182251658 -20833874 - MIR3 SINE MIR -41 167 40 26 82 0 0 chr5 182252521 182252582 -20832950 + AT_rich Low_complexity Low_complexity 1 61 0 567 275 104 14 chr5 182253089 182253300 -20832232 - MIR SINE MIR -32 230 1 205 274 20 0 chr5 182253412 182253463 -20832069 - L2 LINE L2 -5 3267 3216 319 0 65 0 chr5 182253868 182253914 -20831618 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 2222 73 3 3 chr5 182253921 182254253 -20831279 + AluY SINE Alu 1 332 0 248 296 70 35 chr5 182254862 182254977 -20830555 + MIR SINE MIR 30 148 -114 287 293 91 58 chr5 182255302 182255510 -20830022 - MIR SINE MIR -1 261 47 314 362 7 0 chr5 182255644 182255785 -20829747 - MIR3 SINE MIR -11 197 56 252 315 0 14 chr5 182256131 182256204 -20829328 + MIR SINE MIR 36 107 -155 186 224 0 0 chr5 182256214 182256263 -20829269 + (TA)n Simple_repeat Simple_repeat 2 50 0 368 151 221 0 chr5 182257946 182258032 -20827500 - MER103 DNA DNA -30 136 32 21 0 0 0 chr5 182258148 182258169 -20827363 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 182261311 182261350 -20824182 + AT_rich Low_complexity Low_complexity 1 39 0 2515 68 0 0 chr5 182261867 182262175 -20823357 + AluY SINE Alu 1 308 -3 224 395 58 65 chr5 182262545 182262821 -20822711 - L2 LINE L2 -8 3264 2991 5087 142 62 7 chr5 182263158 182264051 -20821481 - HSMAR2 DNA Mariner -54 1248 307 17852 72 4 2 chr5 182264051 182266483 -20819049 - L1PA6 LINE L1 -803 5343 2908 5769 79 13 0 chr5 182266483 182267262 -20818270 + L1PA6 LINE L1 5361 6153 -1 1091 67 191 17 chr5 182267263 182267441 -20818091 - HSMAR2 DNA Mariner -976 326 118 43 20 0 0 chr5 182267579 182267629 -20817903 + AT_rich Low_complexity Low_complexity 1 50 0 812 141 14 14 chr5 182267629 182267771 -20817761 + MER31A-int LTR ERV1 4773 4914 -22 1757 201 54 38 chr5 182267772 182268219 -20817313 + MER31A LTR ERV1 1 454 -31 2399 153 42 43 chr5 182268316 182268870 -20816662 + L1MA8 LINE L1 5734 6286 -5 979 276 25 6 chr5 182269045 182269411 -20816121 + L1MB7 LINE L1 4955 5327 -819 613 111 0 0 chr5 182269417 182269516 -20816016 - AluY SINE Alu -10 301 203 2441 244 122 1 chr5 182269516 182270278 -20815254 + L1MB7 LINE L1 5318 6171 -13 590 223 33 8 chr5 182270732 182270853 -20814679 - MER5A DNA MER1_type 0 189 66 1110 112 5 43 chr5 182270855 182271042 -20814490 - AluSg/x SINE Alu 0 312 133 2829 113 26 2 chr5 182272087 182272511 -20813021 + MER57B LTR ERV1 1 434 0 432 168 108 23 chr5 182272599 182272786 -20812746 + L1MA9 LINE L1 5989 6293 -19 207 0 0 0 chr5 182273027 182273050 -20812482 + (TA)n Simple_repeat Simple_repeat 2 24 0 427 295 50 7 chr5 182273056 182273195 -20812337 - MIR SINE MIR -71 191 47 23 33 0 0 chr5 182273248 182273278 -20812254 + AT_rich Low_complexity Low_complexity 1 30 0 300 53 0 0 chr5 182273464 182273502 -20812030 + (GA)n Simple_repeat Simple_repeat 1 38 0 914 232 96 82 chr5 182273733 182274224 -20811308 + MLT1D LTR MaLR 8 505 0 2074 106 3 0 chr5 182274404 182274723 -20810809 + AluSx SINE Alu 1 320 0 219 356 82 14 chr5 182275286 182275432 -20810100 - MIR3 SINE MIR -33 175 20 1784 188 24 48 chr5 182276062 182276437 -20809095 + L1MA10 LINE L1 5914 6279 -55 2126 126 0 0 chr5 182276437 182276738 -20808794 - AluSq SINE Alu -12 301 1 1784 188 24 48 chr5 182276738 182276782 -20808750 + L1MA10 LINE L1 6279 6323 -11 890 269 78 38 chr5 182276902 182277325 -20808207 + MLT1L LTR MaLR 168 607 -8 1918 268 45 21 chr5 182278434 182279050 -20806482 + Charlie1a DNA MER1_type 14 644 -811 * 2078 214 65 22 chr5 182279044 182279562 -20805970 + Charlie1a DNA MER1_type 782 1276 -1485 450 0 0 0 chr5 182279562 182279612 -20805920 + (TG)n Simple_repeat Simple_repeat 1 50 0 1702 123 0 24 chr5 182279614 182279865 -20805667 - AluSx SINE Alu -32 280 36 2078 214 65 22 chr5 182279865 182279984 -20805548 + Charlie1a DNA MER1_type 1276 1450 -5 610 272 21 20 chr5 182280036 182280256 -20805276 + L1PB4 LINE L1 5954 6165 0 221 292 62 62 chr5 182280455 182280568 -20804964 - MIR SINE MIR -34 228 116 400 264 11 11 chr5 182280627 182280718 -20804814 - L2 LINE L2 -35 3237 3147 293 361 43 19 chr5 182280876 182281084 -20804448 - L2 LINE L2 -353 2961 2749 23 33 0 0 chr5 182282107 182282137 -20803395 + AT_rich Low_complexity Low_complexity 1 30 0 236 233 200 22 chr5 182282318 182282408 -20803124 + Charlie8 DNA MER1_type 132 237 -2180 210 158 0 0 chr5 182282672 182282710 -20802822 + (TATG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr5 182282713 182282735 -20802797 + (TC)n Simple_repeat Simple_repeat 1 22 0 283 337 71 48 chr5 182284313 182284565 -20800967 + MIR SINE MIR 5 262 0 395 365 103 10 chr5 182285119 182285322 -20800210 + MIR SINE MIR 11 232 -30 21 36 0 0 chr5 182285885 182285913 -20799619 + AT_rich Low_complexity Low_complexity 1 28 0 228 276 13 13 chr5 182286057 182286133 -20799399 - MER117 DNA MER1_type -33 164 89 323 376 119 20 chr5 182286496 182286900 -20798632 - L2 LINE L2 0 3272 2829 6527 112 3 3 chr5 182286990 182287913 -20797619 + THE1B-int LTR MaLR 657 1579 -1 2519 116 6 0 chr5 182287914 182288276 -20797256 + THE1B LTR MaLR 1 364 0 192 266 0 31 chr5 182288931 182288995 -20796537 + L2 LINE L2 3210 3271 -1 224 159 79 0 chr5 182290537 182290600 -20794932 + (CATATA)n Simple_repeat Simple_repeat 6 73 0 234 128 0 0 chr5 182290601 182290648 -20794884 - LTR66 LTR ERVL -170 440 394 1269 205 51 21 chr5 182290673 182291005 -20794527 + L1MA9 LINE L1 5769 6110 -202 24 67 0 0 chr5 182291022 182291067 -20794465 + AT_rich Low_complexity Low_complexity 1 45 0 2600 98 41 13 chr5 182291162 182291549 -20793983 + MLT2A1 LTR ERVL 1 398 -46 416 61 37 12 chr5 182291655 182291737 -20793795 + (TA)n Simple_repeat Simple_repeat 2 85 0 285 73 0 24 chr5 182291737 182291778 -20793754 + MLT2A1 LTR ERVL 414 453 0 21 0 0 0 chr5 182291952 182291973 -20793559 + AT_rich Low_complexity Low_complexity 1 21 0 2284 106 3 3 chr5 182293178 182293489 -20792043 - AluSp SINE Alu -2 311 1 1210 254 31 19 chr5 182293791 182294110 -20791422 + MER119 DNA MER1_type 6 328 -255 208 292 22 11 chr5 182294172 182294209 -20791323 + (TA)n Simple_repeat Simple_repeat 2 37 -54 13016 153 26 21 chr5 182294209 182296611 -20788921 + Tigger1 DNA MER2_type 3 2417 -1 208 292 22 11 chr5 182296611 182296662 -20788870 + (TA)n Simple_repeat Simple_repeat 37 91 0 282 250 0 0 chr5 182296662 182296718 -20788814 + MER119 DNA MER1_type 507 562 -21 1643 182 34 7 chr5 182296836 182297133 -20788399 + AluJo SINE Alu 8 312 0 994 214 52 15 chr5 182297281 182297552 -20787980 - L1MC2 LINE L1 -9 6335 6055 * 1721 256 42 50 chr5 182297549 182298326 -20787206 - L1M4 LINE L1 -920 5226 4456 486 0 0 0 chr5 182298400 182298454 -20787078 + (TTA)n Simple_repeat Simple_repeat 1 54 0 1330 202 4 8 chr5 182298462 182298709 -20786823 - AluJo SINE Alu -37 275 30 4977 138 13 15 chr5 182298807 182299652 -20785880 - L1PA16 LINE L1 -9 6437 5595 3141 176 4 0 chr5 182299690 182300305 -20785227 + L1MB5 LINE L1 5223 5839 -335 411 21 0 0 chr5 182300306 182300354 -20785178 + (CA)n Simple_repeat Simple_repeat 1 48 0 2833 132 13 23 chr5 182300359 182300835 -20784697 - L1PA15 LINE L1 -21 6144 5674 3577 240 62 105 chr5 182300846 182304231 -20781301 - L1PA16 LINE L1 -800 5626 2225 306 167 0 30 chr5 182304293 182304359 -20781173 + L1MC4 LINE L1 6640 6703 -1339 261 0 0 0 chr5 182304359 182304388 -20781144 + (TA)n Simple_repeat Simple_repeat 1 29 0 555 178 55 96 chr5 182304413 182304559 -20780973 - AluJo SINE Alu -92 220 81 2876 253 52 50 chr5 182304579 182305721 -20779811 - L1MCb LINE L1 -4305 2440 1302 1902 145 0 16 chr5 182305721 182306024 -20779508 - AluSx SINE Alu -14 298 1 2876 253 52 50 chr5 182306024 182307118 -20778414 - L1MCb LINE L1 -5443 1302 12 23 0 0 0 chr5 182307335 182307358 -20778174 + AT_rich Low_complexity Low_complexity 1 23 0 342 406 27 5 chr5 182307362 182307586 -20777946 - MIR SINE MIR -5 257 29 475 233 100 1 chr5 182307692 182307850 -20777682 + L1ME1 LINE L1 5829 6004 -181 277 318 101 16 chr5 182308012 182308045 -20777487 + L1ME LINE L1 5376 5405 -757 1565 207 118 3 chr5 182308045 182308427 -20777105 - MSTB LTR MaLR 0 426 1 277 318 101 16 chr5 182308427 182308582 -20776950 + L1ME LINE L1 5405 5580 -582 316 261 37 90 chr5 182308652 182308786 -20776746 + MIR SINE MIR 100 226 -36 422 296 79 55 chr5 182310246 182310499 -20775033 + MIR SINE MIR 4 262 0 22 0 0 0 chr5 182310899 182310921 -20774611 + AT_rich Low_complexity Low_complexity 1 22 0 309 262 81 87 chr5 182311020 182311192 -20774340 + HAL1 LINE L1 45 215 -2292 1211 189 40 0 chr5 182311602 182311850 -20773682 - Tigger2 DNA MER2_type -10 2708 2451 4248 143 33 8 chr5 182311914 182312639 -20772893 - Tigger2 DNA MER2_type -1974 744 2 324 264 10 145 chr5 182313160 182313353 -20772179 + HAL1 LINE L1 535 701 -1806 305 221 47 54 chr5 182313830 182313979 -20771553 - L1ME4a LINE L1 0 6121 5974 182 329 0 53 chr5 182314115 182314191 -20771341 - L2 LINE L2 -2080 1234 1163 400 303 31 48 chr5 182315278 182315506 -20770026 + MIR SINE MIR 39 262 0 6988 156 37 9 chr5 182317315 182318579 -20766953 + HSMAR2 DNA Mariner 2 1300 -2 307 381 77 18 chr5 182318928 182319214 -20766318 - MLT1K LTR MaLR -198 390 88 196 333 14 14 chr5 182319725 182319797 -20765735 + MIR SINE MIR 2 73 -189 182 329 25 25 chr5 182320063 182320142 -20765390 - MIR3 SINE MIR -46 162 84 213 204 19 19 chr5 182320309 182320363 -20765169 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 455 281 105 33 chr5 182320949 182321349 -20764183 + L1MC4a LINE L1 5484 5816 -305 246 160 0 0 chr5 182322802 182322852 -20762680 + (CA)n Simple_repeat Simple_repeat 2 51 0 386 345 115 28 chr5 182322975 182323401 -20762131 - L3 LINE CR1 -513 1064 602 21 0 0 0 chr5 182323823 182323844 -20761688 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 182323929 182323960 -20761572 + AT_rich Low_complexity Low_complexity 1 31 0 221 274 65 0 chr5 182324126 182324188 -20761344 - L2 LINE L2 -1 3271 3206 435 285 134 41 chr5 182324748 182324920 -20760612 - MIR SINE MIR -68 194 7 537 333 28 19 chr5 182325115 182325331 -20760201 + MIR SINE MIR 30 247 -15 28 29 0 0 chr5 182325512 182325547 -20759985 + AT_rich Low_complexity Low_complexity 1 35 0 1740 106 0 4 chr5 182326351 182326612 -20758920 + AluSg/x SINE Alu 66 325 0 235 317 48 19 chr5 182326664 182326768 -20758764 - L2 LINE L2 -12 3301 3195 703 176 7 15 chr5 182328886 182329022 -20756510 + FLAM_C SINE Alu 1 135 -8 305 370 53 70 chr5 182329225 182329525 -20756007 + L2 LINE L2 2926 3220 -52 1699 175 27 21 chr5 182329986 182330323 -20755209 - MER44D DNA MER2_type 0 609 1 3455 230 101 42 chr5 182330847 182332147 -20753385 - L1MD2 LINE L1 -10 6349 4863 2305 100 0 0 chr5 182332147 182332457 -20753075 - AluSq SINE Alu -3 310 1 3455 230 101 42 chr5 182332457 182333346 -20752186 - L1MD2 LINE L1 -1496 4863 4028 414 266 82 54 chr5 182333413 182333545 -20751987 - MER63A DNA MER1_type -1492 196 56 2417 146 21 32 chr5 182333545 182333978 -20751554 + MSTA LTR MaLR 1 428 0 414 266 82 54 chr5 182333978 182334029 -20751503 - MER63A DNA MER1_type -1632 56 8 449 326 177 19 chr5 182334295 182334725 -20750807 - L2 LINE L2 -343 2971 2474 403 329 27 40 chr5 182334815 182335040 -20750492 + MIR SINE MIR 14 235 -27 1930 97 29 11 chr5 182335549 182335859 -20749673 + AluSx SINE Alu 1 315 0 1029 284 50 23 chr5 182336196 182336760 -20748772 - L1MD2 LINE L1 -3233 2913 2335 371 211 119 28 chr5 182336924 182337033 -20748499 - L2 LINE L2 -1 3312 3194 2349 124 6 0 chr5 182337532 182337888 -20747644 - L1PA13 LINE L1 -19 6144 5787 23 33 0 0 chr5 182338242 182338272 -20747260 + AT_rich Low_complexity Low_complexity 1 30 0 738 279 72 103 chr5 182338383 182339364 -20746168 + L1 LINE L1 2455 3385 -2761 7517 31 0 2 chr5 182339364 182340414 -20745118 + L1PA4 LINE L1 5105 6152 -3 738 279 72 103 chr5 182340414 182340797 -20744735 + L1 LINE L1 3385 3778 -2368 22 56 0 0 chr5 182340833 182340869 -20744663 + AT_rich Low_complexity Low_complexity 1 36 0 249 269 96 45 chr5 182340938 182341094 -20744438 + L1 LINE L1 4110 4273 -1873 25 65 0 0 chr5 182341282 182341328 -20744204 + AT_rich Low_complexity Low_complexity 1 46 0 346 301 43 59 chr5 182341429 182341615 -20743917 + L1ME3 LINE L1 5884 6066 -96 31 44 0 0 chr5 182341669 182341714 -20743818 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr5 182342247 182342272 -20743260 + AT_rich Low_complexity Low_complexity 1 25 0 6357 58 2 0 chr5 182342988 182343780 -20741752 - L1PA7 LINE L1 -13 6141 5348 457 188 0 0 chr5 182343949 182344029 -20741503 - AluJ/FLAM SINE Alu -232 80 1 195 129 0 0 chr5 182344047 182344078 -20741454 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 911 259 8 4 chr5 182344100 182344336 -20741196 - L1ME1 LINE L1 -99 6067 5831 290 153 17 0 chr5 182344463 182344522 -20741010 + (TA)n Simple_repeat Simple_repeat 2 61 0 521 269 101 39 chr5 182344756 182344790 -20740742 + MIR SINE MIR 2 32 -230 2404 70 0 7 chr5 182344790 182345088 -20740444 + AluY SINE Alu 1 296 -15 521 269 101 39 chr5 182345088 182345261 -20740271 + MIR SINE MIR 32 222 -40 22 56 0 0 chr5 182346528 182346564 -20738968 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 182347160 182347181 -20738351 + AT_rich Low_complexity Low_complexity 1 21 0 452 246 32 149 chr5 182347341 182347622 -20737910 + MIR SINE MIR 15 262 0 543 56 0 0 chr5 182348305 182348376 -20737156 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 300 284 56 116 chr5 182348483 182348803 -20736729 - MLT1K LTR MaLR -88 500 200 228 204 0 20 chr5 182349171 182349220 -20736312 - MIR SINE MIR -101 161 114 580 305 36 53 chr5 182349358 182349660 -20735872 - MER102b DNA MER1_type -21 320 24 1941 143 50 34 chr5 182350058 182350416 -20735116 - THE1B LTR MaLR 0 364 1 10761 98 19 15 chr5 182350416 182351990 -20733542 - THE1B-int LTR MaLR 0 1580 1 2083 139 51 20 chr5 182351990 182352343 -20733189 - THE1B LTR MaLR 0 364 1 261 128 0 0 chr5 182352504 182352551 -20732981 + (TC)n Simple_repeat Simple_repeat 2 48 0 2600 39 0 10 chr5 182352758 182353067 -20732465 - AluY SINE Alu -5 306 1 387 316 91 37 chr5 182353238 182353425 -20732107 + L2 LINE L2 2833 3029 -284 213 333 61 8 chr5 182353490 182353622 -20731910 + L2 LINE L2 3147 3285 -28 248 268 130 0 chr5 182353763 182353886 -20731646 + L2 LINE L2 3147 3285 -28 242 320 93 21 chr5 182355086 182355183 -20730349 + MIR SINE MIR 43 146 -62 242 231 30 41 chr5 182355462 182355551 -20729981 + MIR SINE MIR 78 167 -41 1713 186 10 0 chr5 182356103 182356399 -20729133 + AluSx SINE Alu 1 299 -13 2975 152 10 3 chr5 182357531 182358355 -20727177 - L1M1 LINE L1 -590 5715 4885 * 5985 102 18 28 chr5 182358354 182359340 -20726192 + L1MA3 LINE L1 5330 6305 0 680 281 47 118 chr5 182359552 182360019 -20725513 + MLT1J LTR MaLR 78 511 0 1210 251 72 25 chr5 182360530 182360889 -20724643 + MLT1F1 LTR MaLR 177 552 -15 22 0 0 0 chr5 182360932 182360954 -20724578 + AT_rich Low_complexity Low_complexity 1 22 0 532 207 0 17 chr5 182360956 182361072 -20724460 + FRAM SINE Alu 62 175 -1 863 225 5 63 chr5 182361289 182361511 -20724021 - MER20 DNA MER1_type -1 218 10 336 24 0 0 chr5 182361756 182361797 -20723735 + (TG)n Simple_repeat Simple_repeat 2 42 0 1484 202 7 21 chr5 182362870 182363157 -20722375 - AluJo SINE Alu -29 283 1 2342 103 0 0 chr5 182363683 182363994 -20721538 + AluSq SINE Alu 1 311 -2 1208 209 101 41 chr5 182364939 182365109 -20720423 + MLT1B LTR MaLR 1 159 -231 2013 121 0 48 chr5 182365109 182365424 -20720108 + AluSg SINE Alu 1 300 -10 1208 209 101 41 chr5 182365424 182365621 -20719911 + MLT1B LTR MaLR 159 390 0 22 56 0 0 chr5 182365703 182365739 -20719793 + AT_rich Low_complexity Low_complexity 1 36 0 22 99 0 0 chr5 182365930 182366001 -20719531 + AT_rich Low_complexity Low_complexity 1 71 0 393 225 115 29 chr5 182366234 182366443 -20719089 - L1M4 LINE L1 -2207 3939 3713 326 299 10 21 chr5 182366521 182366618 -20718914 - L1MC4 LINE L1 -1334 6708 6613 508 289 43 39 chr5 182366618 182366876 -20718656 - L1M4 LINE L1 -2451 3695 3437 1553 119 8 0 chr5 182366890 182367133 -20718399 - L1MA2 LINE L1 -1 6303 6059 213 74 37 37 chr5 182367345 182367399 -20718133 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 192 77 0 0 chr5 182367537 182367563 -20717969 + (TG)n Simple_repeat Simple_repeat 1 26 0 1300 282 19 52 chr5 182367564 182367990 -20717542 - MLT2F LTR ERVL -64 599 188 278 261 33 11 chr5 182368008 182368100 -20717432 - MLT1F1 LTR MaLR -409 158 65 23 0 0 0 chr5 182368999 182369022 -20716510 + AT_rich Low_complexity Low_complexity 1 23 0 5716 174 16 8 chr5 182369026 182369167 -20716365 - L1PB2 LINE L1 -39 6112 5974 1575 161 0 4 chr5 182369167 182369432 -20716100 - AluSx SINE Alu 0 305 42 5716 174 16 8 chr5 182369432 182371320 -20714212 - L1PB2 LINE L1 -177 5974 4061 1538 142 0 30 chr5 182371643 182371946 -20713586 - AluSc SINE Alu -14 295 2 2174 114 13 0 chr5 182372149 182372455 -20713077 + AluSq SINE Alu 1 310 -3 264 286 131 11 chr5 182372471 182372646 -20712886 - L1ME LINE L1 -274 5847 5652 186 118 0 0 chr5 182372981 182373015 -20712517 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 2373 86 0 3 chr5 182373812 182374113 -20711419 - AluSp SINE Alu -13 300 1 530 108 12 0 chr5 182374259 182374342 -20711190 + L1MA4 LINE L1 6197 6280 -20 359 268 95 82 chr5 182374660 182375041 -20710491 + MLT1J LTR MaLR 7 422 -89 1168 109 14 43 chr5 182375065 182375276 -20710256 + L1MA4 LINE L1 6084 6288 -12 1835 129 4 0 chr5 182375520 182375776 -20709756 + AluSx SINE Alu 1 257 -55 182 289 52 82 chr5 182375856 182375991 -20709541 + MER5A DNA MER1_type 2 132 -57 201 133 0 0 chr5 182376063 182376093 -20709439 + (GATTG)n Simple_repeat Simple_repeat 3 32 0 2093 135 0 3 chr5 182376375 182376671 -20708861 - AluJb SINE Alu -17 295 1 628 209 196 0 chr5 182376773 182376931 -20708601 + MER5A DNA MER1_type 1 189 0 427 284 35 41 chr5 182377974 182378171 -20707361 - MER102a DNA MER1_type -10 320 125 1178 155 6 0 chr5 182378171 182378345 -20707187 - FAM SINE Alu -10 175 1 1377 199 21 7 chr5 182378349 182378635 -20706897 - AluJb SINE Alu -11 301 12 1187 181 0 94 chr5 182379106 182379246 -20706286 - L1 LINE L1 -2025 4121 4020 2089 94 3 14 chr5 182379246 182379532 -20706000 - AluSg1 SINE Alu -26 283 1 1187 181 0 94 chr5 182379532 182379678 -20705854 - L1 LINE L1 -2126 4020 3862 2794 196 3 58 chr5 182379699 182380352 -20705180 - L1 LINE L1 -3115 3031 2415 2429 115 8 8 chr5 182380564 182380928 -20704604 - THE1B LTR MaLR 0 364 1 241 240 163 39 chr5 182381292 182381421 -20704111 - L1ME4a LINE L1 -3 6398 6254 198 0 0 0 chr5 182381443 182381465 -20704067 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 226 320 71 40 chr5 182381542 182381767 -20703765 - L1ME4a LINE L1 -280 6121 5890 1638 181 10 13 chr5 182381872 182382170 -20703362 + AluSx SINE Alu 1 297 -15 202 336 187 28 chr5 182382512 182382619 -20702913 - MIR SINE MIR -111 151 28 7240 182 34 7 chr5 182382631 182383126 -20702406 + L1MA5 LINE L1 3755 4235 -2065 2574 123 5 0 chr5 182383126 182383499 -20702033 + THE1C LTR MaLR 1 375 0 7240 182 34 7 chr5 182383499 182385477 -20700055 + L1MA5 LINE L1 4235 6300 0 500 277 56 20 chr5 182385720 182385969 -20699563 - L1ME3 LINE L1 -1 6161 5904 403 276 126 18 chr5 182385957 182386290 -20699242 - L1ME4a LINE L1 -543 5899 5544 * 788 303 30 11 chr5 182386383 182386756 -20698776 - L1ME4a LINE L1 -1072 5354 4975 565 290 54 11 chr5 182386824 182387010 -20698522 - L1ME4a LINE L1 -5952 474 281 283 289 63 57 chr5 182387267 182387616 -20697916 - L1MEc LINE L1 -4188 2533 2183 27 0 0 0 chr5 182387921 182387948 -20697584 + AT_rich Low_complexity Low_complexity 1 27 0 514 316 90 55 chr5 182388135 182388502 -20697030 - L1MEc LINE L1 -4861 1679 1300 571 194 8 16 chr5 182388732 182388856 -20696676 + L1 LINE L1 561 683 -6882 222 37 0 0 chr5 182389599 182389626 -20695906 + (TG)n Simple_repeat Simple_repeat 1 27 0 5449 205 14 37 chr5 182390199 182391383 -20694149 + L1MA1 LINE L1 12 1168 -6397 6911 149 22 22 chr5 182391438 182393793 -20691739 + L1MA1 LINE L1 5349 7721 0 22 25 0 25 chr5 182394451 182394471 -20691061 + AT_rich Low_complexity Low_complexity 1 20 -19 679 155 0 54 chr5 182394471 182394600 -20690932 - FLAM_A SINE Alu -11 122 1 22 25 0 25 chr5 182394600 182394619 -20690913 + AT_rich Low_complexity Low_complexity 20 39 0 400 293 189 12 chr5 182395091 182395340 -20690192 - L2 LINE L2 -1 3312 3020 5648 177 36 32 chr5 182396856 182398147 -20687385 + L1 LINE L1 4822 6117 -1448 267 203 0 0 chr5 182398149 182398208 -20687324 + GA-rich Low_complexity Low_complexity 3 61 0 448 316 39 7 chr5 182398755 182398910 -20686622 + L1ME3A LINE L1 5488 5647 -515 6260 70 5 21 chr5 182398943 182399789 -20685743 + HERVL-A1 LTR ERVL 4823 5654 0 2724 123 53 5 chr5 182399789 182400172 -20685360 + MLT2A1 LTR ERVL 1 407 -37 219 103 0 0 chr5 182400172 182400211 -20685321 + (TA)n Simple_repeat Simple_repeat 2 40 0 2724 123 53 5 chr5 182400211 182400243 -20685289 + MLT2A1 LTR ERVL 407 436 -8 25 0 0 0 chr5 182400244 182400269 -20685263 + AT_rich Low_complexity Low_complexity 1 25 0 42352 37 22 1 chr5 182400346 182406373 -20679159 - L1PA2 LINE L1 0 6155 1 365 350 38 18 chr5 182406374 182406579 -20678953 + L1ME3A LINE L1 5766 5949 -221 22 56 0 0 chr5 182406885 182406921 -20678611 + AT_rich Low_complexity Low_complexity 1 36 0 252 0 0 0 chr5 182407175 182407203 -20678329 + (TG)n Simple_repeat Simple_repeat 1 28 0 282 280 53 27 chr5 182407609 182407759 -20677773 + MER103 DNA DNA 3 156 -10 928 212 119 58 chr5 182407958 182408302 -20677230 + MLT1A1 LTR MaLR 1 365 0 212 177 13 38 chr5 182408339 182408418 -20677114 + (TA)n Simple_repeat Simple_repeat 1 77 0 185 333 13 13 chr5 182409031 182409106 -20676426 + MIR3 SINE MIR 131 205 -3 324 311 19 9 chr5 182409964 182410070 -20675462 - MIR SINE MIR -111 151 45 3809 118 20 2 chr5 182410101 182410692 -20674840 - L1MA1 LINE L1 0 6302 5701 353 248 40 20 chr5 182410908 182411009 -20674523 + MIR3 SINE MIR 78 180 -28 213 39 0 0 chr5 182411114 182411140 -20674392 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 208 170 19 38 chr5 182411254 182411307 -20674225 + T-rich Low_complexity Low_complexity 1 52 0 189 159 29 14 chr5 182411349 182411418 -20674114 + (TA)n Simple_repeat Simple_repeat 2 71 0 232 309 43 11 chr5 182411571 182411665 -20673867 - MLT1L LTR MaLR -8 607 511 506 261 151 54 chr5 182411731 182412083 -20673449 - MLT1L LTR MaLR -229 386 1 226 177 25 38 chr5 182412140 182412219 -20673313 - L1P5 LINE L1 -722 5432 5355 369 269 65 76 chr5 182412624 182412899 -20672633 + L2 LINE L2 3042 3313 0 672 120 9 0 chr5 182412997 182413105 -20672427 - AluY SINE Alu -16 295 187 27 0 0 0 chr5 182413264 182413291 -20672241 + AT_rich Low_complexity Low_complexity 1 27 0 183 42 0 0 chr5 182413595 182413619 -20671913 + (GA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr5 182414048 182414077 -20671455 + AT_rich Low_complexity Low_complexity 1 29 0 2044 134 0 7 chr5 182414288 182414595 -20670937 + AluSg1 SINE Alu 1 305 -4 364 315 119 14 chr5 182414801 182415020 -20670512 + MIR SINE MIR 1 242 -20 1509 188 3 40 chr5 182415334 182415637 -20669895 + AluJo SINE Alu 2 293 -19 22 35 0 0 chr5 182416115 182416144 -20669388 + AT_rich Low_complexity Low_complexity 1 29 0 236 241 140 58 chr5 182416350 182416557 -20668975 + L1ME4a LINE L1 5713 5936 -185 464 198 0 23 chr5 182416558 182416644 -20668888 - MLT1A2 LTR MaLR -286 88 5 1053 192 38 38 chr5 182416648 182416888 -20668644 - MLT1A2-int LTR MaLR 0 1735 1496 1991 271 100 3 chr5 182416889 182417461 -20668071 - ERVL LTR ERVL -2241 3244 2618 1084 285 37 10 chr5 182417450 182417748 -20667784 - ERVL LTR ERVL -5243 521 216 * 221 238 0 0 chr5 182418087 182418129 -20667403 + (CA)n Simple_repeat Simple_repeat 1 42 0 1925 149 7 0 chr5 182418150 182418471 -20667061 - AluSq SINE Alu 0 324 2 21 36 0 0 chr5 182418544 182418572 -20666960 + AT_rich Low_complexity Low_complexity 1 28 0 188 218 164 0 chr5 182419351 182419406 -20666126 + L2 LINE L2 3200 3263 -9 23 0 0 0 chr5 182419415 182419438 -20666094 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr5 182419454 182419504 -20666028 + AT_rich Low_complexity Low_complexity 1 50 0 432 301 30 54 chr5 182419578 182419781 -20665751 - MIR SINE MIR -32 230 33 270 81 0 0 chr5 182419815 182419852 -20665680 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 234 105 0 0 chr5 182420433 182420471 -20665061 + (T)n Simple_repeat Simple_repeat 1 38 0 250 383 33 33 chr5 182421043 182421226 -20664306 + MIR3 SINE MIR 9 191 -17 290 357 62 16 chr5 182421490 182421619 -20663913 + L2 LINE L2 3138 3272 0 219 69 0 0 chr5 182421622 182421651 -20663881 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 345 324 122 41 chr5 182422150 182422744 -20662788 - L2 LINE L2 -199 3073 2438 2631 148 7 5 chr5 182423051 182423484 -20662048 - MER57B LTR ERV1 0 434 1 1577 186 3 23 chr5 182423518 182423819 -20661713 + AluJo SINE Alu 3 297 -15 4753 44 3 3 chr5 182424357 182424943 -20660589 - L1PA5 LINE L1 -2 6152 5567 252 153 68 0 chr5 182424966 182425025 -20660507 + T-rich Low_complexity Low_complexity 1 63 0 3974 173 53 12 chr5 182425039 182425854 -20659678 + L1MC2 LINE L1 5319 6166 -178 390 130 6 3 chr5 182425855 182426091 -20659441 + AluSx SINE Alu 1 303 0 1840 147 7 3 chr5 182426095 182426388 -20659144 + AluSx SINE Alu 1 294 -18 598 241 27 43 chr5 182426388 182426575 -20658957 + L1MC2 LINE L1 6161 6344 0 370 271 81 5 chr5 182426581 182426802 -20658730 + MER20B DNA MER1_type 534 771 -12 222 228 0 35 chr5 182427200 182427257 -20658275 - L2 LINE L2 -9 3304 3250 392 261 96 19 chr5 182427289 182427446 -20658086 - MLT1H LTR MaLR -293 256 88 263 313 170 9 chr5 182427698 182427810 -20657722 - MIR SINE MIR -58 150 21 444 353 67 27 chr5 182427920 182428144 -20657388 + MIR SINE MIR 15 247 -15 1252 282 77 26 chr5 182428184 182428847 -20656685 - L1ME2 LINE L1 -19 6145 5449 2598 70 0 0 chr5 182428849 182429179 -20656353 + L1P LINE L1 4044 4373 -1773 482 270 37 21 chr5 182429285 182429474 -20656058 - L1ME LINE L1 -3605 2475 2284 1385 267 52 35 chr5 182429482 182429759 -20655773 - L1ME LINE L1 -4176 2085 1814 1745 169 65 94 chr5 182429759 182430020 -20655512 + LTR54 LTR ERV1 4 244 -266 1653 207 0 3 chr5 182430020 182430325 -20655207 + AluJo SINE Alu 1 304 -8 1745 169 65 94 chr5 182430325 182430585 -20654947 + LTR54 LTR ERV1 244 510 0 1385 267 52 35 chr5 182430585 182430962 -20654570 - L1ME LINE L1 -4447 1814 1420 687 214 28 0 chr5 182430971 182431116 -20654416 + FAM SINE Alu 1 149 -36 914 96 22 22 chr5 182431116 182431294 -20654238 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 618 269 60 66 chr5 182431298 182431833 -20653699 - L1ME LINE L1 -4837 1424 888 1674 150 0 51 chr5 182431833 182432126 -20653406 + AluSx SINE Alu 1 278 -34 252 59 0 0 chr5 182432126 182432160 -20653372 + (TAA)n Simple_repeat Simple_repeat 1 34 0 618 269 60 66 chr5 182432160 182432329 -20653203 - L1ME LINE L1 -5371 890 559 195 139 0 0 chr5 182432351 182432387 -20653145 + (TA)n Simple_repeat Simple_repeat 2 37 0 334 301 77 85 chr5 182432688 182432960 -20652572 - L1ME LINE L1 -5549 521 252 265 267 40 13 chr5 182432962 182433037 -20652495 + MER81 DNA DNA 9 85 -29 297 0 0 0 chr5 182433084 182433117 -20652415 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1748 138 25 4 chr5 182433117 182433392 -20652140 - AluSq SINE Alu -32 281 1 1302 239 88 52 chr5 182433864 182434422 -20651110 + MER39 LTR ERV1 35 558 -7 238 306 28 76 chr5 182435009 182435153 -20650379 + Charlie8 DNA MER1_type 129 265 -2152 384 22 0 0 chr5 182435228 182435273 -20650259 + (CA)n Simple_repeat Simple_repeat 2 46 0 880 196 0 0 chr5 182435382 182435530 -20650002 + FRAM SINE Alu 1 144 -32 191 315 11 33 chr5 182440161 182440253 -20645279 + MER5B DNA MER1_type 15 104 -74 * 259 322 25 76 chr5 182440176 182440294 -20645238 - MER5A DNA MER1_type -28 161 50 216 239 0 28 chr5 182440548 182440619 -20644913 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 57 0 0 chr5 182440702 182440737 -20644795 + AT_rich Low_complexity Low_complexity 1 35 0 217 224 17 0 chr5 182442085 182442143 -20643389 + (CA)n Simple_repeat Simple_repeat 2 60 0 182 347 53 13 chr5 182442175 182442250 -20643282 - MIR SINE MIR -62 146 69 214 284 14 0 chr5 182442256 182442330 -20643202 + (TA)n Simple_repeat Simple_repeat 1 75 0 218 263 18 0 chr5 182442436 182442493 -20643039 + MIR3 SINE MIR 151 208 0 273 282 88 44 chr5 182444691 182444872 -20640660 + L2 LINE L2 2947 3135 -178 188 281 0 35 chr5 182445211 182445268 -20640264 + MIR SINE MIR 1 55 -207 1489 182 4 0 chr5 182445327 182445580 -20639952 + AluJo SINE Alu 38 291 -21 191 408 10 0 chr5 182446273 182446371 -20639161 + L2 LINE L2 2587 2685 -629 870 246 137 61 chr5 182446389 182446493 -20639039 - L1ME2 LINE L1 -2 6162 6067 270 0 0 0 chr5 182446493 182446523 -20639009 + (TG)n Simple_repeat Simple_repeat 1 30 0 870 246 137 61 chr5 182446523 182446974 -20638558 - L1ME2 LINE L1 -97 6067 5565 749 322 70 25 chr5 182447026 182447494 -20638038 - MLT1F1 LTR MaLR 0 567 58 765 205 43 6 chr5 182447524 182447685 -20637847 - MLT1A1 LTR MaLR -17 348 182 207 0 0 0 chr5 182447781 182447804 -20637728 + (TA)n Simple_repeat Simple_repeat 1 23 0 2311 97 3 0 chr5 182447804 182448112 -20637420 - AluY SINE Alu -2 309 1 72 40 0 0 chr5 182448356 182448456 -20637076 + AT_rich Low_complexity Low_complexity 1 100 0 440 298 46 8 chr5 182448916 182449047 -20636485 - L2 LINE L2 -31 3282 3147 1202 144 16 0 chr5 182449181 182449368 -20636164 - AluSg/x SINE Alu -3 307 118 403 333 155 27 chr5 182449529 182450014 -20635518 - L2 LINE L2 -9 3304 2759 22 0 0 0 chr5 182450617 182450639 -20634893 + AT_rich Low_complexity Low_complexity 1 22 0 311 102 20 0 chr5 182450998 182451047 -20634485 - L1ME1 LINE L1 -289 5877 5828 * 1317 197 23 30 chr5 182451042 182451346 -20634186 + L1ME LINE L1 5366 5667 -499 1027 294 53 17 chr5 182453243 182453715 -20631817 + MER113 DNA MER1_type? 32 520 -1 423 304 133 13 chr5 182453886 182454044 -20631488 + MER5B DNA MER1_type 1 177 -1 412 316 44 0 chr5 182454508 182454666 -20630866 - L1ME1 LINE L1 -326 5844 5680 189 178 0 0 chr5 182454932 182454977 -20630555 + T-rich Low_complexity Low_complexity 1 45 0 3387 93 0 8 chr5 182454979 182455462 -20630070 - L1PA13 LINE L1 -1 6162 5684 967 304 100 35 chr5 182455848 182456476 -20629056 - L1ME3A LINE L1 -8 6162 5498 304 291 78 0 chr5 182458185 182458288 -20627244 + MIR SINE MIR 123 233 -29 329 296 158 28 chr5 182458369 182458622 -20626910 - L2 LINE L2 -102 3211 2926 29 60 0 0 chr5 182459031 182459081 -20626451 + AT_rich Low_complexity Low_complexity 1 50 0 494 203 8 0 chr5 182459653 182459771 -20625761 + (CATATA)n Simple_repeat Simple_repeat 6 124 0 387 288 185 7 chr5 182459816 182459962 -20625570 - MER5A DNA MER1_type -4 185 14 31 26 0 0 chr5 182460682 182460720 -20624812 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 182460748 182460770 -20624762 + AT_rich Low_complexity Low_complexity 1 22 0 406 259 82 82 chr5 182460789 182461021 -20624511 - MIR SINE MIR -27 235 4 228 67 0 0 chr5 182461315 182461345 -20624187 + (GA)n Simple_repeat Simple_repeat 1 30 0 277 270 20 30 chr5 182461944 182462044 -20623488 + (CATA)n Simple_repeat Simple_repeat 3 101 0 406 288 42 70 chr5 182463868 182464083 -20621449 - MLT1H LTR MaLR -241 308 100 315 259 17 9 chr5 182465426 182465542 -20619990 + (TATAA)n Simple_repeat Simple_repeat 4 120 0 25 0 0 0 chr5 182465894 182465919 -20619613 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 182466279 182466308 -20619224 + AT_rich Low_complexity Low_complexity 1 29 0 727 207 5 84 chr5 182466554 182466757 -20618775 + MER20 DNA MER1_type 3 189 -30 21 0 0 0 chr5 182467873 182467894 -20617638 + AT_rich Low_complexity Low_complexity 1 21 0 252 370 11 0 chr5 182467974 182468066 -20617466 + MIR SINE MIR 6 98 -164 320 306 104 22 chr5 182468284 182468418 -20617114 + MIR SINE MIR 92 236 -26 21 0 0 0 chr5 182468424 182468445 -20617087 + AT_rich Low_complexity Low_complexity 1 21 0 1373 166 32 35 chr5 182468675 182468982 -20616550 - AluJb SINE Alu 0 306 1 21 36 0 0 chr5 182469323 182469351 -20616181 + AT_rich Low_complexity Low_complexity 1 28 0 313 316 42 21 chr5 182469450 182469545 -20615987 + MIR SINE MIR 5 101 -161 1184 171 0 9 chr5 182471920 182472159 -20613373 - AluJb SINE Alu 0 312 85 227 298 87 29 chr5 182472525 182472629 -20612903 - MIR SINE MIR -85 177 68 25 31 0 0 chr5 182473692 182473724 -20611808 + AT_rich Low_complexity Low_complexity 1 32 0 384 307 67 49 chr5 182473877 182474102 -20611430 + MIR SINE MIR 13 241 -21 284 310 55 41 chr5 182474179 182474324 -20611208 - Charlie8 DNA MER1_type -2261 156 10 2429 62 0 3 chr5 182474850 182475156 -20610376 - AluY SINE Alu -6 305 1 339 25 0 0 chr5 182475235 182475275 -20610257 + (CA)n Simple_repeat Simple_repeat 2 41 0 2103 150 21 16 chr5 182476280 182476653 -20608879 - L1PA13 LINE L1 -2 6161 5787 444 278 89 30 chr5 182476661 182476999 -20608533 + MER113 DNA MER1_type? 121 478 -43 287 370 98 24 chr5 182477109 182477406 -20608126 + L2 LINE L2 2353 2671 -643 264 332 128 38 chr5 182477422 182477657 -20607875 - MIR SINE MIR -1 261 6 360 318 0 0 chr5 182478028 182478113 -20607419 + MIR SINE MIR 35 119 -143 1432 56 0 3 chr5 182478289 182478464 -20607068 - L1PA5 LINE L1 -359 5796 5622 3049 33 0 0 chr5 182478464 182478822 -20606710 + L1PA5 LINE L1 5780 6139 -15 267 54 0 0 chr5 182478822 182478859 -20606673 + (TA)n Simple_repeat Simple_repeat 1 37 0 1432 56 0 3 chr5 182478859 182478882 -20606650 - L1P4 LINE L1 -531 5624 5603 21 0 0 0 chr5 182479798 182479819 -20605713 + AT_rich Low_complexity Low_complexity 1 21 0 264 30 0 0 chr5 182480055 182480088 -20605444 + (CAA)n Simple_repeat Simple_repeat 2 34 0 340 267 0 12 chr5 182480371 182480457 -20605075 + MIR3 SINE MIR 90 174 -34 354 270 37 40 chr5 182480849 182481047 -20604485 - MLT1J LTR MaLR -251 195 5 378 271 42 0 chr5 182481064 182481160 -20604372 - MIR SINE MIR -74 188 89 1805 145 45 0 chr5 182482343 182482662 -20602870 - AluSx SINE Alu 0 312 1 248 274 53 53 chr5 182483569 182483664 -20601868 + Charlie8 DNA MER1_type 170 264 -2153 23 33 0 0 chr5 182483816 182483846 -20601686 + AT_rich Low_complexity Low_complexity 1 30 0 840 81 0 9 chr5 182483852 182483991 -20601541 + AluSp/q SINE Alu 176 313 0 203 136 0 45 chr5 182484350 182484394 -20601138 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 346 370 20 27 chr5 182484573 182484719 -20600813 + MIR3 SINE MIR 52 196 -12 207 236 18 0 chr5 182485236 182485291 -20600241 + (TAA)n Simple_repeat Simple_repeat 2 57 0 243 281 169 0 chr5 182485291 182485380 -20600152 - MIR SINE MIR -30 232 129 369 62 0 0 chr5 182485522 182485570 -20599962 + (TG)n Simple_repeat Simple_repeat 2 49 0 277 107 18 18 chr5 182485642 182485698 -20599834 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 323 240 0 13 chr5 182485733 182485808 -20599724 - MLT1I LTR MaLR 0 409 336 184 206 88 73 chr5 182486252 182486320 -20599212 - L2 LINE L2 -288 3025 2957 218 105 26 0 chr5 182487284 182487322 -20598210 + (ATG)n Simple_repeat Simple_repeat 3 41 0 196 309 0 0 chr5 182487334 182487389 -20598143 - MIR SINE MIR -6 256 202 291 28 0 0 chr5 182487627 182487663 -20597869 + (TG)n Simple_repeat Simple_repeat 2 37 0 253 310 59 48 chr5 182489996 182490183 -20595349 + MIR SINE MIR 23 211 -51 267 264 0 28 chr5 182491095 182491167 -20594365 + L2 LINE L2 3242 3311 -2 198 191 0 0 chr5 182492275 182492317 -20593215 + A-rich Low_complexity Low_complexity 4 45 0 542 320 70 9 chr5 182493054 182493282 -20592250 - MIR SINE MIR -14 248 7 180 0 0 0 chr5 182493954 182493974 -20591558 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 207 0 0 0 chr5 182493979 182494002 -20591530 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 333 0 0 0 chr5 182494379 182494416 -20591116 + (TG)n Simple_repeat Simple_repeat 2 38 0 1279 282 74 43 chr5 182495049 182495605 -20589927 - L2 LINE L2 -2141 1173 601 223 368 47 9 chr5 182495609 182495715 -20589817 - L2 LINE L2 -3201 113 4 335 294 84 60 chr5 182495995 182496246 -20589286 + L2 LINE L2 2750 3016 -256 219 282 13 39 chr5 182496280 182496358 -20589174 + L2 LINE L2 3185 3260 -12 299 283 49 3 chr5 182497230 182497321 -20588211 - MIR SINE MIR -76 132 40 196 315 0 0 chr5 182498117 182498171 -20587361 + MIR3 SINE MIR 116 169 -39 353 345 159 7 chr5 182498277 182498422 -20587110 + MIR3 SINE MIR 32 198 -10 301 308 60 49 chr5 182498930 182499115 -20586417 - MIR SINE MIR -10 252 66 29 0 0 0 chr5 182499250 182499279 -20586253 + AT_rich Low_complexity Low_complexity 1 29 0 303 353 26 39 chr5 182499287 182499443 -20586089 - MIR3 SINE MIR -32 176 23 260 213 213 8 chr5 182500666 182500788 -20584744 + MER103 DNA DNA 1 147 -19 302 274 15 82 chr5 182501499 182501634 -20583898 - MIR SINE MIR -85 177 52 251 385 0 31 chr5 182503611 182503741 -20581791 + MIR3 SINE MIR 60 185 -23 763 290 28 18 chr5 182503829 182504046 -20581486 - MIR SINE MIR -4 258 40 369 318 5 53 chr5 182504057 182504246 -20581286 + LTR16A1 LTR ERVL 1 180 -277 482 308 0 0 chr5 182504856 182504973 -20580559 - L2 LINE L2 0 3313 3197 198 0 0 0 chr5 182505302 182505324 -20580208 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 677 217 14 7 chr5 182505684 182505822 -20579710 + MER3 DNA MER1_type 2 140 -69 207 0 0 0 chr5 182505895 182505918 -20579614 + (TGG)n Simple_repeat Simple_repeat 2 24 0 340 331 73 45 chr5 182506715 182507062 -20578470 - L1MC/D LINE L1 -722 5611 5260 1317 181 0 99 chr5 182507134 182507476 -20578056 - AluJb SINE Alu 0 312 5 258 312 42 19 chr5 182507496 182507711 -20577821 - L1MC/D LINE L1 -978 5168 4949 205 269 19 0 chr5 182508199 182508251 -20577281 + MIR SINE MIR 191 243 -19 2385 68 0 3 chr5 182510447 182510757 -20574775 - AluY SINE Alu -2 309 1 256 360 29 15 chr5 182510856 182510992 -20574540 - L2 LINE L2 -6 3266 3129 3738 27 0 0 chr5 182511889 182512333 -20573199 + L1PA4 LINE L1 5712 6155 0 809 241 91 0 chr5 182512476 182512663 -20572869 - MER63A DNA MER1_type -6 204 1 320 304 93 55 chr5 182513011 182513260 -20572272 + MIR SINE MIR 1 261 -1 213 214 54 18 chr5 182513601 182513657 -20571875 + L2 LINE L2 3215 3272 0 240 301 0 103 chr5 182513978 182514124 -20571408 - MIR SINE MIR -70 192 62 313 308 16 76 chr5 182514253 182514438 -20571094 - MER5B DNA MER1_type 0 178 5 199 305 102 55 chr5 182515398 182515526 -20570006 - MIR SINE MIR -3 259 126 516 288 172 14 chr5 182515670 182515782 -20569750 + MIR SINE MIR 14 107 -155 207 69 0 0 chr5 182515782 182515811 -20569721 + (TAA)n Simple_repeat Simple_repeat 1 29 0 516 288 172 14 chr5 182515811 182515913 -20569619 + MIR SINE MIR 107 262 0 278 297 171 9 chr5 182516025 182516136 -20569396 - L2 LINE L2 -3 3269 3141 715 99 62 6 chr5 182516606 182516767 -20568765 + CT-rich Low_complexity Low_complexity 1 170 0 180 97 0 0 chr5 182516768 182516799 -20568733 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1877 132 7 7 chr5 182516803 182517084 -20568448 - AluSq SINE Alu -32 281 1 269 248 143 28 chr5 182517319 182517464 -20568068 - MIR3 SINE MIR -6 202 33 312 313 133 0 chr5 182517692 182517820 -20567712 + MIR SINE MIR 117 261 -1 372 321 189 29 chr5 182518112 182518392 -20567140 + L2 LINE L2 2989 3313 0 2195 104 0 0 chr5 182519046 182519334 -20566198 - AluSx SINE Alu -24 288 1 211 286 51 41 chr5 182519558 182519656 -20565876 + MIR SINE MIR 92 190 -72 201 273 0 0 chr5 182521054 182521109 -20564423 + T-rich Low_complexity Low_complexity 1 55 0 347 267 50 8 chr5 182523729 182523849 -20561683 + L2 LINE L2 3185 3309 -4 21 57 0 0 chr5 182524820 182524855 -20560677 + AT_rich Low_complexity Low_complexity 1 35 0 227 304 101 0 chr5 182525194 182525263 -20560269 + MIR SINE MIR 14 89 -173 937 201 0 0 chr5 182525311 182525475 -20560057 - FRAM SINE Alu -14 162 1 250 192 8 0 chr5 182526307 182526365 -20559167 - MIR SINE MIR -103 105 45 362 274 11 0 chr5 182526967 182527062 -20558470 + MIR SINE MIR 104 199 -63 258 344 8 0 chr5 182528443 182528565 -20556967 - L1ME LINE L1 -295 5826 5704 242 323 32 16 chr5 182528572 182528696 -20556836 - L1ME LINE L1 -393 5728 5603 1047 296 136 13 chr5 182528698 182528844 -20556688 - LTR33 LTR ERVL -5 516 389 1858 206 81 8 chr5 182528844 182529315 -20556217 - MLT1D LTR MaLR 0 505 1 1047 296 136 13 chr5 182529315 182529624 -20555908 - LTR33 LTR ERVL -132 389 5 395 333 17 8 chr5 182530506 182530626 -20554906 - L2 LINE L2 -4 3268 3148 234 322 0 0 chr5 182531294 182531353 -20554179 + L2 LINE L2 3236 3294 -19 294 125 0 0 chr5 182531454 182531502 -20554030 + (TA)n Simple_repeat Simple_repeat 2 49 0 216 0 0 0 chr5 182531502 182531526 -20554006 + (TG)n Simple_repeat Simple_repeat 2 25 0 2458 181 7 0 chr5 182531836 182532257 -20553275 + MSTB LTR MaLR 3 426 0 6444 247 49 37 chr5 182532896 182533344 -20552188 + L1PA12 LINE L1 2 443 -7141 1926 228 30 75 chr5 182533344 182533985 -20551547 - LTR9 LTR ERV1 0 612 1 6444 247 49 37 chr5 182533985 182535389 -20550143 + L1PA12 LINE L1 443 2408 -5176 245 29 29 0 chr5 182535389 182535423 -20550109 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6444 247 49 37 chr5 182535423 182535858 -20549674 + L1PA12 LINE L1 2408 2836 -4748 * 13597 176 11 15 chr5 182535857 182536709 -20548823 + L1PA12 LINE L1 3590 4444 -3140 2242 117 3 0 chr5 182536709 182537017 -20548515 + AluSc SINE Alu 1 309 0 13597 176 11 15 chr5 182537017 182538805 -20546727 + L1PA12 LINE L1 4444 6220 -1364 6050 105 19 9 chr5 182538807 182540315 -20545217 + L1PA11 LINE L1 4656 6173 -1 240 224 166 54 chr5 182540504 182540727 -20544805 + L1ME3A LINE L1 5083 5330 -816 514 274 71 58 chr5 182540745 182541241 -20544291 + L1ME3A LINE L1 5380 5881 -289 1179 255 78 9 chr5 182541263 182541596 -20543936 + MLT1A1 LTR MaLR 10 365 0 1272 193 37 19 chr5 182541627 182541897 -20543635 + AluJo SINE Alu 1 275 -37 289 230 112 87 chr5 182541951 182542112 -20543420 + L1ME3A LINE L1 6006 6170 0 1949 127 0 46 chr5 182542124 182542431 -20543101 + AluSx SINE Alu 1 293 -19 220 167 19 19 chr5 182543400 182543454 -20542078 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 460 0 0 0 chr5 182543686 182543739 -20541793 + L1PA6 LINE L1 6094 6146 -8 21 57 0 0 chr5 182543739 182543774 -20541758 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr5 182543820 182543848 -20541684 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr5 182544014 182544035 -20541497 + (T)n Simple_repeat Simple_repeat 1 21 0 348 152 83 0 chr5 182544376 182544508 -20541024 + (TA)n Simple_repeat Simple_repeat 2 144 0 530 336 61 37 chr5 182544556 182545134 -20540398 - L2 LINE L2 -210 3062 2476 269 292 21 0 chr5 182545324 182545420 -20540112 + MIR SINE MIR 77 174 -88 683 325 117 48 chr5 182545549 182546234 -20539298 - L2 LINE L2 -1038 2276 1545 37 52 0 0 chr5 182546694 182546752 -20538780 + AT_rich Low_complexity Low_complexity 1 58 0 208 58 103 23 chr5 182546803 182546890 -20538642 + (TA)n Simple_repeat Simple_repeat 1 94 0 24 0 0 0 chr5 182546895 182546919 -20538613 + AT_rich Low_complexity Low_complexity 1 24 0 387 178 53 18 chr5 182546920 182547089 -20538443 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 396 329 60 44 chr5 182547582 182547898 -20537634 - L1MC/D LINE L1 -2232 5576 5256 21 36 0 0 chr5 182548126 182548154 -20537378 + AT_rich Low_complexity Low_complexity 1 28 0 2397 120 11 0 chr5 182548174 182548540 -20536992 - L1PB1 LINE L1 0 6151 5782 318 206 10 82 chr5 182548555 182548652 -20536880 + L1MC4 LINE L1 6614 6703 -1339 4262 174 12 32 chr5 182548656 182550176 -20535356 - L1PB1 LINE L1 -359 5792 4303 404 200 8 0 chr5 182550649 182550774 -20534758 + (TA)n Simple_repeat Simple_repeat 2 127 0 2001 53 0 0 chr5 182550826 182551073 -20534459 + L1PA5 LINE L1 5907 6153 -1 378 301 205 21 chr5 182551276 182551515 -20534017 - L1MEd LINE L1 -5783 336 54 273 57 0 0 chr5 182551801 182551836 -20533696 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 623 219 0 8 chr5 182551860 182551983 -20533549 + FLAM_A SINE Alu 1 122 -11 2245 158 8 0 chr5 182552189 182552550 -20532982 + THE1B LTR MaLR 1 364 0 1435 232 27 36 chr5 182552637 182553111 -20532421 - L1ME2 LINE L1 -1 6163 5694 567 241 0 0 chr5 182553121 182553237 -20532295 - FLAM_A SINE Alu -19 123 8 804 239 39 13 chr5 182553240 182553470 -20532062 - L1ME2 LINE L1 -477 5687 5452 767 263 44 41 chr5 182553556 182553894 -20531638 - L1ME2 LINE L1 -3318 2828 2490 13790 229 67 9 chr5 182553899 182554266 -20531266 - L1PB1 LINE L1 0 6867 6523 261 0 0 0 chr5 182554266 182554295 -20531237 + (TG)n Simple_repeat Simple_repeat 2 30 0 13790 229 67 9 chr5 182554295 182555363 -20530169 - L1PB1 LINE L1 -344 6523 5518 275 65 22 0 chr5 182555363 182555409 -20530123 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 13790 229 67 9 chr5 182555409 182560446 -20525086 - L1PB1 LINE L1 -1349 5518 19 22 35 0 0 chr5 182561493 182561522 -20524010 + AT_rich Low_complexity Low_complexity 1 29 0 1309 240 41 29 chr5 182561690 182562106 -20523426 - LTR52 LTR ERVL 0 421 1 1964 154 7 0 chr5 182562394 182562693 -20522839 - AluSx SINE Alu -11 301 1 248 284 75 0 chr5 182563005 182563072 -20522460 - MIR3 SINE MIR -22 186 115 314 342 40 7 chr5 182563663 182563812 -20521720 - MLT1L LTR MaLR -53 562 409 718 234 31 71 chr5 182563881 182564107 -20521425 - MER20 DNA MER1_type 0 219 3 254 242 0 91 chr5 182564328 182564427 -20521105 - MLT1J2 LTR MaLR -20 430 341 777 189 40 70 chr5 182564497 182564724 -20520808 - L1MD3 LINE L1 -8 7987 7768 329 364 65 0 chr5 182565225 182565379 -20520153 + MIR SINE MIR 86 249 -13 24 0 0 0 chr5 182565514 182565538 -20519994 + AT_rich Low_complexity Low_complexity 1 24 0 191 298 0 0 chr5 182567226 182567283 -20518249 + L2 LINE L2 3226 3282 -31 617 238 119 20 chr5 182567591 182567979 -20517553 - MLT1F1 LTR MaLR 0 567 71 650 206 8 0 chr5 182568022 182568148 -20517384 - FLAM_C SINE Alu -12 131 5 261 306 28 49 chr5 182568799 182568943 -20516589 - MIR SINE MIR -40 222 82 206 170 0 21 chr5 182568979 182569026 -20516506 + GA-rich Low_complexity Low_complexity 1 46 0 612 289 5 16 chr5 182569348 182569538 -20515994 - MER5A DNA MER1_type 0 189 2 287 214 18 0 chr5 182569667 182569723 -20515809 + MER94 DNA DNA 17 73 -61 200 222 0 0 chr5 182569853 182569898 -20515634 + (TA)n Simple_repeat Simple_repeat 1 45 0 330 87 0 0 chr5 182569898 182569944 -20515588 + (CA)n Simple_repeat Simple_repeat 2 47 0 1056 256 114 33 chr5 182570020 182570387 -20515145 + LTR16A LTR ERVL 54 450 0 1295 159 27 27 chr5 182570738 182570995 -20514537 - Tigger2 DNA MER2_type -10 2708 2452 4520 143 23 5 chr5 182571053 182571794 -20513738 - Tigger2 DNA MER2_type -1964 754 1 511 230 183 37 chr5 182572534 182572725 -20512807 - MER20 DNA MER1_type 0 219 1 314 283 217 30 chr5 182572841 182573071 -20512461 - L2 LINE L2 -6 3307 3035 24 32 0 0 chr5 182573443 182573474 -20512058 + AT_rich Low_complexity Low_complexity 1 31 0 2473 112 22 0 chr5 182573647 182574003 -20511529 - THE1B LTR MaLR 0 364 1 1855 159 63 0 chr5 182574274 182574607 -20510925 + L1MA9 LINE L1 5417 5770 -542 236 208 19 0 chr5 182574619 182574672 -20510860 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 225 244 22 44 chr5 182574674 182574764 -20510768 - L1MC4 LINE L1 -1341 6701 6614 183 42 0 0 chr5 182574766 182574790 -20510742 + (CA)n Simple_repeat Simple_repeat 2 25 0 2594 165 41 10 chr5 182574798 182575154 -20510378 + L1MA9 LINE L1 5789 6167 -145 252 59 0 0 chr5 182575154 182575188 -20510344 + (CA)n Simple_repeat Simple_repeat 1 34 0 2594 165 41 10 chr5 182575188 182575339 -20510193 + L1MA9 LINE L1 6167 6312 0 426 203 109 23 chr5 182576384 182576512 -20509020 - MIR SINE MIR -15 247 109 2359 201 40 88 chr5 182576618 182576789 -20508743 + MER82 DNA MER2_type 4 182 -471 1994 108 0 39 chr5 182576789 182577075 -20508457 - AluSq SINE Alu -38 275 1 2359 201 40 88 chr5 182577075 182577573 -20507959 + MER82 DNA MER2_type 182 641 -12 225 305 68 64 chr5 182578064 182578313 -20507219 - MLT1K LTR MaLR -92 496 247 760 232 185 44 chr5 182578724 182579064 -20506468 + LTR16C LTR ERVL 79 466 -25 32 0 0 0 chr5 182579754 182579786 -20505746 + AT_rich Low_complexity Low_complexity 1 32 0 1671 198 3 0 chr5 182580012 182580315 -20505217 + AluJo SINE Alu 1 304 -8 1224 212 55 4 chr5 182580418 182580531 -20505001 + AluJo SINE Alu 11 117 -195 198 0 0 0 chr5 182580531 182580553 -20504979 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1224 212 55 4 chr5 182580553 182580694 -20504838 + AluJo SINE Alu 117 278 -34 1960 148 3 10 chr5 182580793 182581096 -20504436 + AluSx SINE Alu 1 301 -11 349 286 93 57 chr5 182581267 182581547 -20503985 + L1MC/D LINE L1 5254 5543 -2265 232 294 46 20 chr5 182581618 182581771 -20503761 + L1MC/D LINE L1 5648 5804 -2004 1323 191 13 40 chr5 182582116 182582418 -20503114 + AluJo SINE Alu 13 303 -9 404 116 0 14 chr5 182582418 182582487 -20503045 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 321 348 93 17 chr5 182582914 182583204 -20502328 - L1M4 LINE L1 -1191 4955 4644 232 296 110 37 chr5 182583213 182583343 -20502189 - MIR SINE MIR -64 144 25 26 0 0 0 chr5 182583628 182583654 -20501878 + AT_rich Low_complexity Low_complexity 1 26 0 873 246 53 74 chr5 182583657 182584145 -20501387 - L1MC4 LINE L1 -16 8026 7549 22 56 0 0 chr5 182584743 182584779 -20500753 + AT_rich Low_complexity Low_complexity 1 36 0 1709 234 60 41 chr5 182586904 182587391 -20498141 - MLT1D LTR MaLR -9 496 1 2293 92 7 0 chr5 182589349 182589641 -20495891 - AluSg SINE Alu -16 294 1 207 355 11 21 chr5 182590608 182590701 -20494831 + MIR SINE MIR 45 136 -126 1595 260 64 12 chr5 182591572 182592137 -20493395 + L1MC3 LINE L1 3775 4368 -1778 2100 211 50 8 chr5 182592173 182592689 -20492843 + L1MC3 LINE L1 5856 6393 -1392 1129 159 16 0 chr5 182592702 182592884 -20492648 - Tigger3(Golem) DNA MER2_type -1 3028 2844 1605 233 42 131 chr5 182693216 182694028 -20391504 - L1MDa LINE L1 -5762 778 39 313 267 78 6 chr5 182694049 182694229 -20391303 - L1M4 LINE L1 -3367 2779 2587 218 136 23 0 chr5 182695108 182695152 -20390380 + CT-rich Low_complexity Low_complexity 2 46 0 728 261 97 16 chr5 182695188 182695459 -20390073 + MLT1F1 LTR MaLR 235 567 0 2350 152 56 10 chr5 182697128 182697537 -20387995 - MSTA LTR MaLR 0 428 1 1233 220 59 42 chr5 182697708 182698179 -20387353 + MER66A LTR ERV1 104 478 0 313 263 291 16 chr5 182698237 182698484 -20387048 - MER5C DNA MER1_type -6 318 4 22 35 0 0 chr5 182699104 182699133 -20386399 + AT_rich Low_complexity Low_complexity 1 29 0 1851 127 37 16 chr5 182699599 182699921 -20385611 + L1PA16 LINE L1 5838 6166 0 297 348 0 19 chr5 182701308 182701469 -20384063 + A-rich Low_complexity Low_complexity 4 161 0 393 258 117 0 chr5 182701498 182701618 -20383914 + L1MEc LINE L1 513 646 -5750 * 1856 277 89 35 chr5 182701598 182701630 -20383902 + L1MEc LINE L1 1080 1109 -5106 1497 204 0 22 chr5 182701630 182701904 -20383628 + AluJo SINE Alu 1 268 -44 1856 277 89 35 chr5 182701904 182703118 -20382414 + L1MEc LINE L1 1109 2391 -3824 2203 132 0 0 chr5 182703118 182703428 -20382104 + AluSx SINE Alu 3 312 0 1856 277 89 35 chr5 182703428 182703736 -20381796 + L1MEc LINE L1 2391 2681 -3534 1989 150 10 0 chr5 182704003 182704297 -20381235 + AluSx SINE Alu 2 298 -14 4836 148 72 19 chr5 182704429 182705284 -20380248 + MER70A-int LTR ERVL 4123 5023 0 653 212 22 15 chr5 182705289 182705396 -20380136 + MER70A LTR ERVL 1 108 -364 257 231 0 0 chr5 182705396 182705448 -20380084 + LTR30 LTR ERV1 1 52 -670 305 122 0 0 chr5 182705448 182705489 -20380043 + LTR12 LTR ERV1 53 93 -621 3404 108 2 78 chr5 182705489 182706054 -20379478 + LTR12 LTR ERV1 55 576 -138 2228 175 8 16 chr5 182706054 182706431 -20379101 + MER70A LTR ERVL 99 472 0 307 323 16 47 chr5 182706982 182707109 -20378423 + L2 LINE L2 3191 3313 0 365 190 15 15 chr5 182708767 182708904 -20376628 + (TA)n Simple_repeat Simple_repeat 2 138 0 312 27 0 0 chr5 182709380 182709417 -20376115 + (ATG)n Simple_repeat Simple_repeat 2 38 0 1479 169 106 0 chr5 182709418 182709672 -20375860 - AluJb SINE Alu -31 281 1 7403 32 0 0 chr5 182709781 182710839 -20374693 - L1PA4 LINE L1 0 6155 5107 627 53 0 0 chr5 182710839 182710914 -20374618 + U6 snRNA snRNA 33 107 0 13651 26 2 0 chr5 182710914 182712549 -20372983 + L1P LINE L1 3468 5106 -1040 477 279 36 24 chr5 182712660 182712825 -20372707 + MLT1I LTR MaLR 241 407 -2 1554 191 25 0 chr5 182712840 182713153 -20372379 - AluJo SINE Alu 0 320 1 1182 324 78 11 chr5 182713811 182714601 -20370931 + L2 LINE L2 2461 3309 -4 425 338 26 20 chr5 182715252 182715403 -20370129 + MIR SINE MIR 48 199 -63 1998 128 28 0 chr5 182715680 182715969 -20369563 + AluSx SINE Alu 1 297 -15 251 363 0 11 chr5 182716033 182716124 -20369408 + MIR SINE MIR 13 102 -160 792 32 0 0 chr5 182716142 182716237 -20369295 + (TTATA)n Simple_repeat Simple_repeat 5 99 0 355 343 66 22 chr5 182716341 182716522 -20369010 - MIR SINE MIR -10 252 64 31 48 0 16 chr5 182716853 182716867 -20368665 + AT_rich Low_complexity Low_complexity 1 14 -48 1895 148 0 0 chr5 182716867 182717158 -20368374 - AluSx SINE Alu -21 291 1 31 48 0 16 chr5 182717158 182717206 -20368326 + AT_rich Low_complexity Low_complexity 14 62 0 425 241 131 7 chr5 182717264 182717409 -20368123 - MER3 DNA MER1_type -45 164 2 809 367 59 17 chr5 182717423 182717977 -20367555 + L2 LINE L2 2742 3313 0 361 227 41 52 chr5 182717985 182718082 -20367450 - MIR SINE MIR -123 139 44 218 179 18 0 chr5 182719204 182719260 -20366272 + T-rich Low_complexity Low_complexity 2 58 0 237 316 70 18 chr5 182719751 182719865 -20365667 - MIR SINE MIR -90 172 53 21 36 0 0 chr5 182720186 182720214 -20365318 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 182720521 182720542 -20364990 + AT_rich Low_complexity Low_complexity 1 21 0 303 28 0 0 chr5 182721709 182721745 -20363787 + (TC)n Simple_repeat Simple_repeat 2 37 0 249 235 0 0 chr5 182722698 182722749 -20362783 - Charlie8 DNA MER1_type -1000 1417 1367 261 305 53 11 chr5 182723130 182723225 -20362307 - L2 LINE L2 -234 3038 2940 467 299 101 10 chr5 182723372 182723579 -20361953 + MIR SINE MIR 37 262 0 274 302 107 24 chr5 182725270 182725439 -20360093 + LTR67 LTR ERVL 375 557 0 1806 146 0 4 chr5 182725556 182725837 -20359695 + LOR1a LTR ERV1 1 280 -217 398 306 69 0 chr5 182725857 182726001 -20359531 - MER103 DNA DNA -3 163 10 277 300 154 0 chr5 182726193 182726323 -20359209 + MIR SINE MIR 84 233 -29 460 298 8 8 chr5 182726340 182726461 -20359071 - LTR28 LTR ERV1 0 1020 900 1868 219 78 89 chr5 182726540 182727293 -20358239 - LTR1B LTR ERV1 -81 745 1 33 43 0 0 chr5 182727293 182727340 -20358192 + AT_rich Low_complexity Low_complexity 1 47 0 197 312 11 75 chr5 182727456 182727549 -20357983 + L2 LINE L2 3136 3222 -50 338 174 28 110 chr5 182728336 182728445 -20357087 - MLT1I LTR MaLR -6 403 304 456 293 120 80 chr5 182728682 182729156 -20356376 + L2 LINE L2 2821 3313 0 231 316 35 44 chr5 182729158 182729272 -20356260 - MIR SINE MIR -130 132 20 596 310 43 5 chr5 182730018 182730202 -20355330 + MIR SINE MIR 33 223 -39 516 315 18 6 chr5 182730486 182730651 -20354881 - MIR SINE MIR -6 256 90 24 0 0 0 chr5 182731969 182731993 -20353539 + AT_rich Low_complexity Low_complexity 1 24 0 213 39 0 0 chr5 182732014 182732040 -20353492 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 217 296 28 63 chr5 182732161 182732273 -20353259 + MIR SINE MIR 42 148 -74 354 331 68 14 chr5 182732426 182732574 -20352958 + MIR SINE MIR 31 186 -76 7274 27 1 0 chr5 182732842 182733699 -20351833 - L1PA3 LINE L1 -1 6154 5297 8920 23 0 2 chr5 182733799 182734857 -20350675 - L1PA3 LINE L1 -854 5292 4237 308 236 27 9 chr5 182734920 182735030 -20350502 + (TA)n Simple_repeat Simple_repeat 2 113 0 465 353 82 42 chr5 182735497 182735803 -20349729 + L2 LINE L2 2936 3253 -19 412 82 68 0 chr5 182736462 182736535 -20348997 - LTR54 LTR ERV1 -30 480 403 30 0 0 0 chr5 182736744 182736774 -20348758 + AT_rich Low_complexity Low_complexity 1 30 0 533 279 130 60 chr5 182737346 182737751 -20347781 + MLT1J2 LTR MaLR 11 448 -2 2261 103 7 0 chr5 182737963 182738263 -20347269 + AluSx SINE Alu 3 304 -8 268 224 0 17 chr5 182739806 182739864 -20345668 - MIR SINE MIR -111 151 95 258 344 117 48 chr5 182740029 182740259 -20345273 + MLT1K LTR MaLR 205 450 -138 478 232 14 36 chr5 182741117 182741255 -20344277 + MLT1F1 LTR MaLR 425 559 -8 29 70 0 0 chr5 182741259 182741316 -20344216 + AT_rich Low_complexity Low_complexity 1 57 0 203 296 0 0 chr5 182741327 182741381 -20344151 + (CA)n Simple_repeat Simple_repeat 1 54 0 256 273 117 19 chr5 182741505 182741710 -20343822 + L1M4 LINE L1 3800 4024 -2122 764 215 14 0 chr5 182741793 182741937 -20343595 + FRAM SINE Alu 1 146 -30 806 203 16 43 chr5 182742081 182742268 -20343264 - MER5A DNA MER1_type 0 189 8 205 167 83 21 chr5 182742235 182742283 -20343249 + L3 LINE CR1 1071 1121 -456 * 1946 84 84 0 chr5 182742732 182742994 -20342538 - AluSc SINE Alu -12 297 14 199 325 185 33 chr5 182743404 182743555 -20341977 - L2 LINE L2 0 3272 3099 2480 49 0 10 chr5 182743587 182743892 -20341640 + AluY SINE Alu 1 302 -9 1439 248 58 37 chr5 182744985 182745469 -20340063 + MLT1D LTR MaLR 3 496 -9 548 246 21 42 chr5 182745477 182745619 -20339913 + MER5B DNA MER1_type 35 173 -5 27 29 0 0 chr5 182745919 182745953 -20339579 + AT_rich Low_complexity Low_complexity 1 34 0 608 157 28 28 chr5 182746016 182746194 -20339338 + CT-rich Low_complexity Low_complexity 1 178 0 241 192 0 27 chr5 182746206 182746279 -20339253 + CT-rich Low_complexity Low_complexity 1 71 0 218 193 36 24 chr5 182746314 182746397 -20339135 + CT-rich Low_complexity Low_complexity 4 87 0 13187 187 27 24 chr5 182746608 182749631 -20335901 - L1MA3 LINE L1 0 7724 4686 2010 145 137 11 chr5 182749631 182750011 -20335521 - MSTA LTR MaLR 0 428 1 13187 187 27 24 chr5 182750011 182752076 -20333456 - L1MA3 LINE L1 -3038 4686 2629 16585 179 26 16 chr5 182752206 182755267 -20330265 - L1M1 LINE L1 -4458 3107 17 1785 132 26 10 chr5 182755283 182755594 -20329938 - L1MA4A LINE L1 -4 6299 5984 12458 205 26 60 chr5 182755596 182756712 -20328820 - L1 LINE L1 -2819 4029 2877 207 0 0 0 chr5 182756712 182756735 -20328797 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 12458 205 26 60 chr5 182756735 182757038 -20328494 - L1 LINE L1 -3971 2877 2565 2135 110 0 0 chr5 182757038 182757358 -20328174 - AluY SINE Alu 0 320 1 12458 205 26 60 chr5 182757358 182760093 -20325439 - L1 LINE L1 -4283 2565 13 26 0 0 0 chr5 182760100 182760126 -20325406 + AT_rich Low_complexity Low_complexity 1 26 0 954 98 0 0 chr5 182760126 182760248 -20325284 - AluY SINE Alu -189 122 1 1993 137 0 33 chr5 182760360 182760667 -20324865 - AluSx SINE Alu -15 297 1 564 296 38 16 chr5 182761053 182761239 -20324293 - MIR SINE MIR -65 197 8 584 307 52 24 chr5 182762164 182762376 -20323156 + MIR SINE MIR 31 248 -14 256 379 26 9 chr5 182762615 182762731 -20322801 - L2 LINE L2 -13 3300 3183 894 270 52 8 chr5 182763262 182763510 -20322022 + L1M4 LINE L1 46 304 -6555 477 224 36 68 chr5 182763595 182763787 -20321745 + L1M4 LINE L1 762 947 -5912 468 248 128 44 chr5 182764280 182764506 -20321026 + L1M4 LINE L1 1205 1449 -5410 6615 58 139 9 chr5 182764508 182765443 -20320089 - L1P LINE L1 -5086 1060 4 5209 223 62 60 chr5 182765442 182766866 -20318666 + L1 LINE L1 2623 4042 -2104 * 2332 92 0 22 chr5 182766866 182767181 -20318351 + AluSg SINE Alu 1 308 -2 5209 223 62 60 chr5 182767181 182767236 -20318296 + L1 LINE L1 4042 4095 -2051 2041 178 0 0 chr5 182767236 182767612 -20317920 - L1MA5A LINE L1 -10 6287 5912 5209 223 62 60 chr5 182767612 182768108 -20317424 + L1 LINE L1 4095 4604 -1542 1241 241 62 10 chr5 182768105 182768495 -20317037 + L1M4 LINE L1 4627 5036 -1921 * 446 210 22 22 chr5 182768518 182768656 -20316876 + L1M4 LINE L1 5145 5282 -1675 305 349 74 6 chr5 182768729 182768904 -20316628 - L1M4 LINE L1 -768 5378 5192 906 298 73 40 chr5 182768921 182768999 -20316533 + L2 LINE L2 2841 2915 -398 2092 48 90 35 chr5 182768999 182769288 -20316244 + AluY SINE Alu 1 305 -6 906 298 73 40 chr5 182769288 182769659 -20315873 + L2 LINE L2 2915 3305 -8 21 0 0 0 chr5 182770071 182770092 -20315440 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr5 182770668 182770708 -20314824 + AT_rich Low_complexity Low_complexity 1 40 0 2376 60 0 0 chr5 182770717 182771002 -20314530 + AluY SINE Alu 1 285 -26 1124 256 127 3 chr5 182771014 182771354 -20314178 + MLT1D LTR MaLR 117 498 -7 258 288 30 38 chr5 182771374 182771506 -20314026 - L1MEd LINE L1 -5377 742 612 2097 161 27 52 chr5 182771743 182772050 -20313482 - LOR1b LTR ERV1 0 461 167 2220 113 0 3 chr5 182772050 182772352 -20313180 - AluSx SINE Alu -10 302 2 2097 161 27 52 chr5 182772352 182772491 -20313041 - LOR1b LTR ERV1 -294 167 26 1255 296 65 32 chr5 182773523 182774237 -20311295 - L2 LINE L2 0 3313 2569 1685 167 42 0 chr5 182775713 182776000 -20309532 + AluJb SINE Alu 1 299 -13 698 67 0 0 chr5 182776000 182776089 -20309443 - L1P3 LINE L1 -487 5667 5579 3557 33 13 13 chr5 182776089 182776538 -20308994 + L1PA7 LINE L1 5704 6152 -2 371 324 82 14 chr5 182776663 182776882 -20308650 + MIR SINE MIR 29 262 0 182 82 33 49 chr5 182777823 182777884 -20307648 + (TTAAA)n Simple_repeat Simple_repeat 3 62 0 24 67 0 0 chr5 182777958 182778003 -20307529 + AT_rich Low_complexity Low_complexity 1 45 0 475 320 67 53 chr5 182779280 182779772 -20305760 - L1MEc LINE L1 -3660 2555 2102 229 370 75 0 chr5 182780163 182780390 -20305142 - L1MEc LINE L1 -4579 1817 1574 194 400 32 0 chr5 182780735 182780860 -20304672 - MIR SINE MIR -6 256 128 202 286 71 0 chr5 182780912 182780968 -20304564 + L2 LINE L2 3155 3214 -58 1317 119 29 119 chr5 182782256 182782568 -20302964 + LTR12 LTR ERV1 1 284 -430 350 214 29 19 chr5 182782569 182782672 -20302860 + LTR30 LTR ERV1 552 655 -67 653 111 0 0 chr5 182782672 182782762 -20302770 + LTR12 LTR ERV1 625 714 0 180 325 63 32 chr5 182782785 182782911 -20302621 - MIR3 SINE MIR -68 140 11 3500 115 83 115 chr5 182783689 182783852 -20301680 + LTR1 LTR ERV1 1 168 -617 1991 123 20 7 chr5 182783852 182784152 -20301380 + AluSq SINE Alu 2 305 -8 3500 115 83 115 chr5 182784152 182784799 -20300733 + LTR1 LTR ERV1 168 785 0 1641 198 44 73 chr5 182786146 182786666 -20298866 + MLT1D LTR MaLR 1 505 0 584 64 0 0 chr5 182786850 182786928 -20298604 - L1PA3 LINE L1 -2 6153 6076 3387 40 0 0 chr5 182787028 182787433 -20298099 - L1P1 LINE L1 -439 5716 5312 11054 24 0 0 chr5 182787433 182788730 -20296802 - L1P1 LINE L1 -1054 5092 3796 1124 22 0 0 chr5 182788726 182788864 -20296668 + L1P LINE L1 5091 5228 -918 * 438 289 42 7 chr5 182788867 182789009 -20296523 + L2 LINE L2 3155 3301 -12 198 103 0 0 chr5 182789010 182789039 -20296493 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1721 237 64 42 chr5 182789483 182790011 -20295521 + MER77 LTR ERV1 66 605 0 285 288 0 12 chr5 182790015 182790095 -20295437 - MIR SINE MIR -65 197 119 25 65 0 0 chr5 182790139 182790185 -20295347 + AT_rich Low_complexity Low_complexity 1 46 0 2469 161 31 0 chr5 182790211 182790634 -20294898 - Tigger1 DNA MER2_type 0 2418 1983 5877 128 19 71 chr5 182790643 182791724 -20293808 - Tigger1 DNA MER2_type -1172 1246 223 1004 147 7 0 chr5 182791725 182791875 -20293657 + AluJb SINE Alu 1 151 -161 751 208 13 0 chr5 182791875 182792024 -20293508 - Tigger1 DNA MER2_type -2244 174 24 2201 114 3 0 chr5 182792957 182793265 -20292267 + AluSg SINE Alu 2 310 0 23 68 0 0 chr5 182794256 182794300 -20291232 + AT_rich Low_complexity Low_complexity 1 44 0 2043 145 0 10 chr5 182794695 182795005 -20290527 - AluSx SINE Alu -5 307 1 370 311 33 0 chr5 182795985 182796107 -20289425 - MIR SINE MIR -80 182 57 512 309 74 78 chr5 182796161 182796228 -20289304 + L1MEd LINE L1 598 664 -5455 2138 113 3 23 chr5 182796228 182796538 -20288994 + AluSg SINE Alu 1 304 -6 512 309 74 78 chr5 182796538 182796904 -20288628 + L1MEd LINE L1 664 1029 -5090 816 239 38 31 chr5 182797038 182797356 -20288176 + L1M4 LINE L1 4134 4453 -1693 2559 209 98 25 chr5 182798947 182799582 -20285950 + Cheshire DNA MER1_type 156 836 -1584 2291 84 0 7 chr5 182799582 182799879 -20285653 - AluY SINE Alu -16 295 1 1091 135 32 11 chr5 182799910 182800095 -20285437 + Tigger3b DNA MER2_type 349 537 -694 2274 100 10 0 chr5 182800281 182800591 -20284941 + AluSp SINE Alu 1 313 0 586 172 0 0 chr5 182801164 182801263 -20284269 + AluJ/FLAM SINE Alu 1 99 -213 3229 151 100 91 chr5 182801363 182801731 -20283801 + Cheshire DNA MER1_type 1382 1745 -675 1692 167 37 7 chr5 182801731 182802025 -20283507 - AluJo SINE Alu -7 305 3 3229 151 100 91 chr5 182802025 182802485 -20283047 + Cheshire DNA MER1_type 1745 2218 -202 5044 119 1 9 chr5 182802782 182803538 -20281994 + L1PA11 LINE L1 5423 6172 -2 613 332 76 4 chr5 182803745 182803983 -20281549 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 182804987 182805159 -20280373 - LTR8 LTR ERV1 -9 682 510 30142 40 1 1 chr5 182805162 182809658 -20275874 - L1PA4 LINE L1 -1 6154 1662 24 32 0 0 chr5 182810165 182810196 -20275336 + AT_rich Low_complexity Low_complexity 1 31 0 210 71 0 0 chr5 182810248 182810276 -20275256 + (TCTA)n Simple_repeat Simple_repeat 2 29 0 44101 40 2 2 chr5 182810298 182816459 -20269073 + L1PA3 LINE L1 3 6155 0 219 196 0 22 chr5 182816558 182816604 -20268928 + MIR SINE MIR 106 150 -112 1032 288 63 44 chr5 182816622 182817844 -20267688 - L1ME LINE L1 -4632 2506 1224 427 285 62 7 chr5 182817968 182818112 -20267420 - L1ME LINE L1 -5909 1038 887 2317 97 3 0 chr5 182818944 182819244 -20266288 + AluSp SINE Alu 1 301 -12 5895 94 32 0 chr5 182820126 182821027 -20264505 - L1PA11 LINE L1 -73 6101 5174 197 323 69 39 chr5 182821530 182821660 -20263872 + MIR SINE MIR 55 188 -74 199 175 35 0 chr5 182822693 182822750 -20262782 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 226 256 165 80 chr5 182822802 182822978 -20262554 + L1MEd LINE L1 447 637 -5735 575 231 27 105 chr5 182823400 182823644 -20261888 + L1M4 LINE L1 4777 4990 -1156 1895 216 15 10 chr5 182823644 182824038 -20261494 + MSTD LTR MaLR 1 396 0 575 231 27 105 chr5 182824038 182824126 -20261406 + L1M4 LINE L1 4990 5083 -1063 * 640 275 50 15 chr5 182824123 182824385 -20261147 + L1MEd LINE L1 1475 1745 -4639 387 242 11 0 chr5 182824584 182824675 -20260857 + MER96 DNA MER1_type? 1 92 -83 318 333 50 62 chr5 182825113 182825371 -20260161 - L1ME LINE L1 -6604 255 1 439 290 70 15 chr5 182825467 182825667 -20259865 - MIR SINE MIR -1 261 51 200 364 31 37 chr5 182826635 182826797 -20258735 + MIR SINE MIR 31 191 -71 201 295 347 0 chr5 182827236 182827331 -20258201 + MIR SINE MIR 34 161 -101 * 471 302 8 97 chr5 182827328 182827586 -20257946 - MIR SINE MIR -8 254 20 21 71 0 0 chr5 182827683 182827725 -20257807 + AT_rich Low_complexity Low_complexity 1 42 0 329 335 50 41 chr5 182827817 182828038 -20257494 - MIR SINE MIR -37 225 3 228 344 179 13 chr5 182828656 182828807 -20256725 + MIR SINE MIR 35 210 -52 196 363 0 73 chr5 182829023 182829147 -20256385 - L2 LINE L2 -31 3241 3127 2335 209 44 13 chr5 182830206 182830820 -20254712 - L1MB8 LINE L1 -1 6988 6356 561 256 55 98 chr5 182830818 182830980 -20254552 - L1MB8 LINE L1 -3677 3280 3113 * 577 234 16 0 chr5 182830980 182831104 -20254428 - FLAM_A SINE Alu -6 127 2 561 256 55 98 chr5 182831104 182831462 -20254070 - L1MB8 LINE L1 -3844 3113 2825 1656 179 18 7 chr5 182831462 182831783 -20253749 - AluJb SINE Alu 0 324 1 561 256 55 98 chr5 182831783 182832034 -20253498 - L1MB8 LINE L1 -4132 2825 2565 21 0 0 0 chr5 182832152 182832173 -20253359 + AT_rich Low_complexity Low_complexity 1 21 0 491 194 31 62 chr5 182832173 182832333 -20253199 + L1MEd LINE L1 2604 2758 -3624 5262 183 18 14 chr5 182832338 182834381 -20251151 + L1PA16 LINE L1 4116 6166 0 1622 274 39 17 chr5 182834507 182834754 -20250778 - L1MB8 LINE L1 -4536 2423 2183 321 47 0 0 chr5 182834754 182834797 -20250735 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1622 274 39 17 chr5 182834797 182835199 -20250333 - L1MB8 LINE L1 -4776 2183 1760 300 158 0 0 chr5 182835364 182835421 -20250111 + (TA)n Simple_repeat Simple_repeat 1 57 0 3086 267 50 47 chr5 182835442 182837027 -20248505 - L1MB8 LINE L1 -5191 1668 13 225 325 20 26 chr5 182837200 182837311 -20248221 - MIR SINE MIR -107 101 32 246 116 0 0 chr5 182837325 182837368 -20248164 + (TC)n Simple_repeat Simple_repeat 2 44 0 275 311 16 8 chr5 182837869 182837991 -20247541 + (TATG)n Simple_repeat Simple_repeat 2 124 0 1790 168 3 17 chr5 182838107 182838399 -20247133 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr5 182838690 182838721 -20246811 + AT_rich Low_complexity Low_complexity 1 31 0 2054 125 0 4 chr5 182838731 182839011 -20246521 + AluSx SINE Alu 3 281 -31 23 0 0 0 chr5 182839941 182839964 -20245568 + AT_rich Low_complexity Low_complexity 1 23 0 203 250 0 0 chr5 182840708 182840752 -20244780 + (TG)n Simple_repeat Simple_repeat 1 44 0 347 353 67 20 chr5 182841038 182841254 -20244278 + MIR SINE MIR 4 227 -35 1896 190 89 5 chr5 182841378 182841773 -20243759 + MSTA LTR MaLR 1 428 0 8089 181 34 38 chr5 182841773 182843431 -20242101 + MSTA-int LTR MaLR 1 1651 0 1963 157 110 3 chr5 182843434 182843817 -20241715 + MSTA LTR MaLR 4 427 -1 219 174 22 0 chr5 182843878 182843924 -20241608 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 294 180 0 49 chr5 182843929 182843990 -20241542 - L2 LINE L2 0 3313 3256 2847 308 79 26 chr5 182845505 182846789 -20238743 + L2 LINE L2 1478 2828 -486 481 298 98 98 chr5 182846805 182847174 -20238358 + L2 LINE L2 2945 3313 0 243 298 11 0 chr5 182847440 182847534 -20237998 - MER113 DNA MER1_type? -44 477 383 232 219 81 49 chr5 182847680 182847803 -20237729 - MER113 DNA MER1_type? -377 144 18 251 299 157 8 chr5 182849175 182849309 -20236223 - MIR SINE MIR 0 262 109 1269 231 36 91 chr5 182849959 182850289 -20235243 - MLT1D LTR MaLR -7 498 205 1920 96 4 0 chr5 182850289 182850581 -20234951 + AluSx SINE Alu 35 327 0 1269 231 36 91 chr5 182850581 182850776 -20234756 - MLT1D LTR MaLR -300 205 1 25 0 0 0 chr5 182850979 182851004 -20234528 + AT_rich Low_complexity Low_complexity 1 25 0 58 0 0 0 chr5 182851414 182851472 -20234060 + AT_rich Low_complexity Low_complexity 1 58 0 4860 123 5 4 chr5 182851472 182852213 -20233319 - L1PA15 LINE L1 -13 6152 5411 1239 139 50 25 chr5 182852215 182852417 -20233115 - MER1B DNA MER1_type 0 339 133 228 217 0 0 chr5 182852412 182852458 -20233074 - MER1B DNA MER1_type -291 46 1 * 4319 199 2 7 chr5 182852471 182852582 -20232950 - L1PA15 LINE L1 -743 5403 5293 2054 119 31 0 chr5 182852582 182852875 -20232657 - AluSx SINE Alu -10 302 1 4319 199 2 7 chr5 182852875 182853652 -20231880 - L1PA15 LINE L1 -853 5293 4519 9759 101 48 70 chr5 182853935 182855668 -20229864 + pTR5 LTR ERV1 743 2438 0 28073 125 14 69 chr5 182857678 182864218 -20221314 + L1PA8 LINE L1 1 6171 -1 286 358 80 27 chr5 182864244 182864431 -20221101 - MIR SINE MIR -48 214 18 657 243 20 0 chr5 182864629 182864777 -20220755 - MIR SINE MIR -44 218 68 2206 133 122 8 chr5 182865339 182865723 -20219809 - MSTA LTR MaLR 0 428 1 8880 178 18 9 chr5 182865723 182867360 -20218172 - MSTA-int LTR MaLR 0 1651 1 1981 138 146 8 chr5 182867360 182867736 -20217796 - MSTA LTR MaLR 0 428 1 222 213 0 0 chr5 182868076 182868123 -20217409 + CT-rich Low_complexity Low_complexity 2 48 0 479 369 11 6 chr5 182871221 182871400 -20214132 - MLT1K LTR MaLR -407 181 2 6401 143 18 8 chr5 182872024 182873478 -20212054 - L1MA1 LINE L1 0 6302 4833 899 174 0 27 chr5 182874569 182874718 -20210814 + FRAM SINE Alu 2 146 -30 25 51 0 0 chr5 182874718 182874757 -20210775 + AT_rich Low_complexity Low_complexity 1 39 0 184 250 0 0 chr5 182874808 182874848 -20210684 - L2 LINE L2 -77 3236 3197 368 20 20 0 chr5 182876568 182876617 -20208915 + (CA)n Simple_repeat Simple_repeat 2 51 0 243 247 0 26 chr5 182877361 182877438 -20208094 + L1ME LINE L1 42 116 -5954 330 264 18 9 chr5 182877814 182877924 -20207608 + L1ME3A LINE L1 6024 6134 -36 8846 139 16 13 chr5 182877929 182879389 -20206143 - Tigger1 DNA MER2_type 0 2418 955 1276 130 172 8 chr5 182879390 182879628 -20205904 + LTR12 LTR ERV1 1 277 -437 365 221 0 0 chr5 182879628 182879705 -20205827 + LTR30 LTR ERV1 544 620 -102 696 171 60 0 chr5 182879705 182879822 -20205710 + LTR12 LTR ERV1 355 478 -236 5452 163 11 15 chr5 182879823 182880615 -20204917 - Tigger1 DNA MER2_type -1459 959 168 2116 94 4 0 chr5 182880615 182880910 -20204622 + AluSc SINE Alu 13 308 0 5452 163 11 15 chr5 182880910 182881078 -20204454 - Tigger1 DNA MER2_type -2250 168 1 248 288 0 0 chr5 182881985 182882044 -20203488 + L2 LINE L2 3202 3260 -12 221 343 0 0 chr5 182882244 182882311 -20203221 - L2 LINE L2 -48 3224 3158 214 307 82 29 chr5 182882427 182882645 -20202887 - L2 LINE L2 -257 3015 2022 466 200 9 9 chr5 182882659 182882764 -20202768 - MER53 DNA DNA -84 105 1 336 302 75 19 chr5 182883354 182883513 -20202019 - MIR SINE MIR -1 261 94 5168 165 37 10 chr5 182883574 182885220 -20200312 + L1MA4 LINE L1 4614 6299 -1 2320 91 0 0 chr5 182885232 182885528 -20200004 + AluY SINE Alu 1 296 -15 210 330 36 36 chr5 182885548 182885660 -20199872 - MIR SINE MIR -148 114 3 21 0 0 0 chr5 182886193 182886214 -20199318 + AT_rich Low_complexity Low_complexity 1 21 0 837 331 127 15 chr5 182886776 182887304 -20198228 - MLT1K LTR MaLR 0 588 2 321 264 6 132 chr5 182887433 182887607 -20197925 + L2 LINE L2 2896 3047 -225 1631 112 27 0 chr5 182888118 182888378 -20197154 + L1MA3 LINE L1 6039 6305 0 535 298 127 25 chr5 182888596 182888918 -20196614 + L2 LINE L2 2959 3313 0 213 322 44 0 chr5 182888909 182888999 -20196533 + L2 LINE L2 2987 3080 -192 * 524 276 20 26 chr5 182889915 182890067 -20195465 - L2 LINE L2 0 3313 3163 309 335 20 40 chr5 182890428 182890580 -20194952 + MER5A DNA MER1_type 40 188 -1 1715 130 47 70 chr5 182890658 182891042 -20194490 + THE1C LTR MaLR 1 375 0 255 307 37 28 chr5 182891042 182891178 -20194354 - MER5B DNA MER1_type -38 151 1 26 30 0 0 chr5 182892225 182892258 -20193274 + AT_rich Low_complexity Low_complexity 1 33 0 4290 172 28 34 chr5 182892840 182893892 -20191640 - L1MA8 LINE L1 -61 6230 5191 208 217 31 199 chr5 182896023 182896184 -20189348 - MIR SINE MIR -10 252 119 2198 69 66 0 chr5 182896408 182896696 -20188836 + AluY SINE Alu 1 307 -4 398 226 0 12 chr5 182896773 182896857 -20188675 + MLT1I LTR MaLR 317 399 -10 330 26 0 0 chr5 182897661 182897700 -20187832 + (TG)n Simple_repeat Simple_repeat 2 40 0 1140 187 42 75 chr5 182898219 182898550 -20186982 - MSTD LTR MaLR 0 396 77 359 360 48 64 chr5 182898552 182899033 -20186499 - L2 LINE L2 -1114 2200 1728 389 69 0 17 chr5 182899045 182899103 -20186429 + (TA)n Simple_repeat Simple_repeat 1 57 0 423 111 28 0 chr5 182899427 182899499 -20186033 + MADE1 DNA Mariner 4 77 -3 225 111 0 0 chr5 182899504 182899549 -20185983 - LTR66 LTR ERVL -172 438 394 574 132 42 28 chr5 182899551 182899695 -20185837 + (TATATG)n Simple_repeat Simple_repeat 4 149 0 23 0 0 0 chr5 182899718 182899741 -20185791 + AT_rich Low_complexity Low_complexity 1 23 0 3989 160 50 24 chr5 182900155 182900918 -20184614 - LTR39 LTR ERV1 0 783 1 441 0 0 0 chr5 182901053 182901102 -20184430 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 28 29 0 0 chr5 182904272 182904307 -20181225 + AT_rich Low_complexity Low_complexity 1 35 0 504 271 0 66 chr5 182905481 182905662 -20179870 + MER5B DNA MER1_type 1 169 -9 339 25 0 0 chr5 182905678 182905718 -20179814 + (CA)n Simple_repeat Simple_repeat 2 41 0 1311 182 27 10 chr5 182906052 182906469 -20179063 + LTR54 LTR ERV1 1 510 0 288 0 0 0 chr5 182906738 182906770 -20178762 + (TC)n Simple_repeat Simple_repeat 2 33 0 192 283 19 0 chr5 182908728 182908781 -20176751 + L2 LINE L2 3251 3304 -9 333 0 0 0 chr5 182909284 182909321 -20176211 + (TG)n Simple_repeat Simple_repeat 2 38 0 568 217 43 31 chr5 182910615 182910776 -20174756 - LTR23 LTR ERV1 0 437 275 1119 167 5 33 chr5 182911127 182911212 -20174320 - MER3 DNA MER1_type 0 209 123 1857 115 0 0 chr5 182911212 182911456 -20174076 + AluSg SINE Alu 52 295 -15 1119 167 5 33 chr5 182911456 182911585 -20173947 - MER3 DNA MER1_type -86 123 1 2101 169 130 23 chr5 182912302 182912787 -20172745 - LTR49 LTR ERV1 -49 546 10 714 300 68 92 chr5 182912921 182913837 -20171695 - L2 LINE L2 0 3313 2399 410 312 135 0 chr5 182914163 182914350 -20171182 + MIR SINE MIR 40 249 -13 463 338 59 43 chr5 182914406 182914456 -20171076 - MLT1K LTR MaLR -254 334 286 1932 154 103 10 chr5 182914456 182914846 -20170686 - MSTA LTR MaLR -2 426 1 463 338 59 43 chr5 182914846 182915118 -20170414 - MLT1K LTR MaLR -302 286 7 3568 156 14 19 chr5 182915769 182916418 -20169114 - MER39B LTR ERV1 -5 648 3 1426 217 64 50 chr5 182917220 182917591 -20167941 + MLT1C LTR MaLR 24 403 -64 1755 114 121 4 chr5 182917591 182917871 -20167661 - AluSq SINE Alu 0 313 1 1426 217 64 50 chr5 182917871 182917937 -20167595 + MLT1C LTR MaLR 403 467 0 22 70 0 0 chr5 182918476 182918519 -20167013 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr5 182918641 182918687 -20166845 + AT_rich Low_complexity Low_complexity 1 46 0 2264 105 3 0 chr5 182919129 182919435 -20166097 - AluSg SINE Alu -3 307 1 277 265 48 12 chr5 182919568 182919651 -20165881 - L2 LINE L2 -14 3258 3173 3835 62 0 0 chr5 182920532 182921020 -20164512 - L1PA7 LINE L1 -5 6149 5662 1667 158 33 0 chr5 182921036 182921309 -20164223 - AluSx SINE Alu -30 282 1 456 240 0 0 chr5 182921947 182922068 -20163464 + (TG)n Simple_repeat Simple_repeat 2 122 0 233 208 143 0 chr5 182922071 182922148 -20163384 + L1MC4 LINE L1 6615 6702 -1340 2041 117 0 0 chr5 182922638 182922919 -20162613 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 182922923 182922944 -20162588 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 43451 46 2 1 chr5 182923064 182929206 -20156326 - L1PA4 LINE L1 -1 6154 2 194 303 43 99 chr5 182929443 182929605 -20155927 - L2 LINE L2 -5 3267 3115 229 188 138 38 chr5 182930090 182930170 -20155362 + MER103 DNA DNA 3 90 -76 814 154 19 0 chr5 182930383 182930545 -20154987 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 810 188 56 64 chr5 182931088 182931322 -20154210 + MER96B DNA MER1_type? 1 232 -185 1887 126 0 47 chr5 182932722 182933040 -20152492 + AluSg1 SINE Alu 1 303 -6 456 77 0 0 chr5 182933793 182933858 -20151674 + (GGAGA)n Simple_repeat Simple_repeat 2 66 0 203 354 42 37 chr5 182934495 182934710 -20150822 - L2 LINE L2 -1052 2262 2047 2445 237 102 21 chr5 182934941 182935705 -20149827 - L1ME1 LINE L1 -5 6161 5336 441 54 0 0 chr5 182937690 182937746 -20147786 + (TA)n Simple_repeat Simple_repeat 2 57 0 635 198 156 24 chr5 182937928 182938095 -20147437 + MER5A DNA MER1_type 1 189 0 430 297 141 16 chr5 182938146 182938402 -20147130 - L2 LINE L2 0 3313 3026 335 337 11 0 chr5 182938411 182938506 -20147026 + MER5A DNA MER1_type 7 102 -87 216 310 0 0 chr5 182938611 182938670 -20146862 - L2 LINE L2 -308 2964 2906 26 0 0 0 chr5 182938979 182939005 -20146527 + AT_rich Low_complexity Low_complexity 1 26 0 4342 42 0 2 chr5 182939398 182939923 -20145609 + L1PA3 LINE L1 5629 6152 -3 330 272 161 34 chr5 182940152 182940475 -20145057 + MER113 DNA MER1_type? 106 469 -52 488 287 83 6 chr5 182940764 182940975 -20144557 + MIR SINE MIR 31 253 -9 417 218 269 31 chr5 182941740 182941933 -20143599 - MIR SINE MIR -2 260 22 1096 108 27 11 chr5 182942503 182942688 -20142844 + L1MA1 LINE L1 6115 6302 0 534 321 47 5 chr5 182943074 182943267 -20142265 - MIR SINE MIR -25 237 37 316 298 161 19 chr5 182944300 182944461 -20141071 - MIR SINE MIR -6 256 73 486 155 82 0 chr5 182944464 182944561 -20140971 - MER53 DNA DNA -83 106 2 195 250 0 39 chr5 182944826 182944878 -20140654 + L2 LINE L2 3258 3307 -6 7613 41 2 1 chr5 182944986 182946685 -20138847 + L1PA4 LINE L1 4454 6154 -1 438 249 158 18 chr5 182946966 182947131 -20138401 + MIR SINE MIR 73 260 -2 183 42 0 0 chr5 182947230 182947254 -20138278 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2148 115 0 0 chr5 182947257 182947536 -20137996 - AluSc SINE Alu -29 280 2 2190 114 0 0 chr5 182947983 182948273 -20137259 + AluSx SINE Alu 1 290 -22 1913 113 50 30 chr5 182948550 182948852 -20136680 + AluY SINE Alu 1 308 -3 316 275 50 38 chr5 182949027 182949187 -20136345 - Charlie8 DNA MER1_type -2194 223 62 2485 105 119 38 chr5 182949783 182950075 -20135457 + LTR19A LTR ERV1 1 343 -143 2414 67 10 0 chr5 182950075 182950372 -20135160 - AluY SINE Alu -11 300 1 2485 105 119 38 chr5 182950372 182950526 -20135006 + LTR19A LTR ERV1 343 483 -3 6549 132 15 9 chr5 182950537 182950854 -20134678 + LTR19A-int LTR ERV1 1 315 -5271 204 67 0 0 chr5 182950854 182950884 -20134648 + (TCTCTG)n Simple_repeat Simple_repeat 2 31 0 6549 132 15 9 chr5 182950884 182951559 -20133973 + LTR19A-int LTR ERV1 315 999 -4587 515 345 110 5 chr5 182951561 182951987 -20133545 - L1M4 LINE L1 -1971 4175 3705 243 203 58 43 chr5 182953878 182953947 -20131585 + Charlie8 DNA MER1_type 1359 1428 -989 672 242 56 6 chr5 182954383 182954561 -20130971 - MER5A DNA MER1_type 0 189 3 30 27 0 0 chr5 182955365 182955402 -20130130 + AT_rich Low_complexity Low_complexity 1 37 0 1613 221 26 29 chr5 182955477 182955500 -20130032 - MER89 LTR ERV1 0 559 537 1911 200 3 3 chr5 182955500 182955865 -20129667 - MLT1A1 LTR MaLR 0 365 1 1613 221 26 29 chr5 182955865 182956221 -20129311 - MER89 LTR ERV1 -22 537 181 378 185 0 0 chr5 182956225 182956290 -20129242 - MER89 LTR ERV1 -488 71 7 203 304 0 18 chr5 182956515 182956571 -20128961 - L2 LINE L2 0 3313 3259 * 233 343 98 0 chr5 182956560 182956662 -20128870 + L2 LINE L2 298 409 -2905 6793 64 30 1 chr5 182956663 182958278 -20127254 - L1PA8 LINE L1 -5 6167 4509 1768 94 8 0 chr5 182958278 182958543 -20126989 + L1P LINE L1 2958 3224 -2922 411 327 96 19 chr5 182958566 182958826 -20126706 + L2 LINE L2 442 721 -2593 1630 164 0 43 chr5 182958985 182959284 -20126248 + AluJb SINE Alu 1 286 -26 312 27 0 0 chr5 182959305 182959342 -20126190 + (TG)n Simple_repeat Simple_repeat 2 38 0 188 323 15 15 chr5 182959355 182959420 -20126112 + MER5B DNA MER1_type 69 133 -45 21 0 0 0 chr5 182959493 182959514 -20126018 + AT_rich Low_complexity Low_complexity 1 21 0 252 295 129 55 chr5 182959578 182959795 -20125737 + L2 LINE L2 855 1087 -2227 1453 299 133 22 chr5 182959825 182960638 -20124894 + L2 LINE L2 1547 2449 -865 2395 158 59 20 chr5 182960689 182961195 -20124337 - L1MA10 LINE L1 -3 6331 5806 244 184 13 92 chr5 182961196 182961272 -20124260 + L1MA10 LINE L1 5713 5782 -552 262 291 0 0 chr5 182961280 182961359 -20124173 + L2 LINE L2 2495 2573 -741 2212 109 7 34 chr5 182961368 182961713 -20123819 - MER51B LTR ERV1 0 377 50 295 138 313 25 chr5 182961707 182961787 -20123745 - MER51A LTR ERV1 -531 103 1 * 695 336 119 17 chr5 182961791 182962212 -20123320 + L2 LINE L2 2591 3095 -218 1633 182 0 47 chr5 182962212 182962530 -20123002 - AluJo SINE Alu -9 303 1 695 336 119 17 chr5 182962530 182962747 -20122785 + L2 LINE L2 3095 3288 -25 406 322 100 30 chr5 182962819 182963089 -20122443 - L2 LINE L2 -96 3217 2929 2256 105 13 7 chr5 182963382 182963687 -20121845 - AluSg SINE Alu -1 309 3 202 281 52 118 chr5 182963823 182963958 -20121574 + MIR3 SINE MIR 38 163 -45 279 0 0 0 chr5 182964563 182964594 -20120938 + (TG)n Simple_repeat Simple_repeat 1 31 0 1495 158 21 26 chr5 182964634 182964966 -20120566 - MER61C LTR ERV1 -5 429 2 867 138 0 22 chr5 182965160 182965298 -20120234 + LTR8 LTR ERV1 1 135 -556 566 106 0 62 chr5 182965292 182965405 -20120127 + LTR8 LTR ERV1 410 515 -176 * 31054 31 3 0 chr5 182965405 182969920 -20115612 + L1PA3 LINE L1 1630 6154 -1 1142 145 6 0 chr5 182969923 182970095 -20115437 + LTR8 LTR ERV1 510 682 -9 613 332 76 4 chr5 182971099 182971337 -20114195 - MIR SINE MIR 0 262 8 19895 158 12 14 chr5 182971544 182973393 -20112139 - L1PA11 LINE L1 -2 6172 4321 2826 7 0 0 chr5 182973393 182973699 -20111833 - AluY SINE Alu -5 306 1 19895 158 12 14 chr5 182973699 182976487 -20109045 - L1PA11 LINE L1 -1853 4321 1550 24 67 0 0 chr5 182976772 182976817 -20108715 + AT_rich Low_complexity Low_complexity 1 45 0 1831 128 3 48 chr5 182976865 182977155 -20108377 + AluSx SINE Alu 1 277 -35 6820 195 16 28 chr5 182977530 182979498 -20106034 + L1MA9 LINE L1 3843 5788 -524 233 196 20 0 chr5 182979521 182979572 -20105960 - L1M2 LINE L1 -524 5788 5737 2236 196 46 24 chr5 182979608 182979905 -20105627 + L1MA9 LINE L1 5776 6091 -221 1933 81 0 12 chr5 182979905 182980204 -20105328 - AluY SINE Alu 0 333 38 2236 196 46 24 chr5 182980204 182980406 -20105126 + L1MA9 LINE L1 6091 6287 -25 687 295 33 26 chr5 182980440 182980711 -20104821 + MLT1K LTR MaLR 307 579 -9 182 226 38 0 chr5 182981105 182981158 -20104374 + MIR SINE MIR 98 152 -110 343 241 35 23 chr5 182982323 182982410 -20103122 - L2 LINE L2 -16 3297 3210 333 232 51 36 chr5 182982460 182982598 -20102934 + L1MC4 LINE L1 7902 8041 -1 2450 46 19 10 chr5 182982912 182983219 -20102313 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 182983311 182983334 -20102198 + (A)n Simple_repeat Simple_repeat 1 23 0 231 171 0 0 chr5 182983748 182983819 -20101713 - L1PA10 LINE L1 0 6168 6121 1433 230 64 94 chr5 182984722 182985288 -20100244 - MLT1E2 LTR MaLR -2 624 76 289 252 133 44 chr5 182985195 182985330 -20100202 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 182985626 182985665 -20099867 + (TA)n Simple_repeat Simple_repeat 1 39 0 2207 115 0 16 chr5 182985665 182985978 -20099554 - AluSx SINE Alu -4 308 1 491 273 32 7 chr5 182986422 182986576 -20098956 + LTR67 LTR ERVL 400 557 0 1411 179 3 105 chr5 182987125 182987450 -20098082 + AluJo SINE Alu 1 292 -20 1209 136 19 0 chr5 182987564 182987778 -20097754 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 182987982 182988015 -20097517 + (TG)n Simple_repeat Simple_repeat 1 33 0 1865 125 13 58 chr5 182988245 182988558 -20096974 - AluSq SINE Alu -13 300 2 2289 100 3 0 chr5 182988571 182988872 -20096660 - AluSc SINE Alu -7 302 1 2082 135 0 6 chr5 182988900 182989211 -20096321 - AluSg1 SINE Alu 0 309 1 236 311 41 33 chr5 182989291 182989413 -20096119 + LTR67 LTR ERVL 421 543 -14 371 349 34 7 chr5 182990989 182991138 -20094394 - MIR SINE MIR -97 165 13 2192 105 0 10 chr5 182992117 182992412 -20093120 + AluSg SINE Alu 3 294 -16 2314 75 0 31 chr5 182992414 182992735 -20092797 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 182992745 182992786 -20092746 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 182992785 182992809 -20092723 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 617 264 37 12 chr5 182993184 182993347 -20092185 - MER5A DNA MER1_type -7 182 16 784 201 43 109 chr5 182993399 182993616 -20091916 + L1MB8 LINE L1 4969 5143 -1017 2094 118 3 0 chr5 182993616 182993913 -20091619 - AluSq SINE Alu -15 298 1 784 201 43 109 chr5 182993913 182994130 -20091402 + L1MB8 LINE L1 5143 5373 -787 228 100 0 0 chr5 182995440 182995480 -20090052 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 182995479 182995504 -20090028 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3449 198 64 17 chr5 182996137 182996921 -20088611 + L1MB8 LINE L1 5352 6172 -6 224 354 42 0 chr5 182997179 182997275 -20088257 + L2 LINE L2 3173 3272 0 210 276 103 35 chr5 182997448 182997535 -20087997 + MIR SINE MIR 19 111 -97 477 292 143 47 chr5 182997765 182998107 -20087425 + MLT1L LTR MaLR 20 394 -221 319 331 39 0 chr5 182998142 182998269 -20087263 + MLT1L LTR MaLR 478 609 -6 328 284 0 11 chr5 182999169 182999257 -20086275 + L2 LINE L2 3225 3311 -2 2615 124 11 49 chr5 182999328 182999773 -20085759 - MSTA LTR MaLR 0 428 1 1841 134 16 26 chr5 183002638 183002944 -20082588 + AluJb SINE Alu 3 305 -7 2473 56 0 0 chr5 183003137 183003440 -20082092 - AluY SINE Alu -8 303 1 1889 135 14 0 chr5 183003714 183004011 -20081521 + AluSx SINE Alu 1 301 -11 1026 225 0 9 chr5 183004143 183004374 -20081158 - L1MD1 LINE L1 0 6636 6408 8225 235 94 33 chr5 183004382 183004900 -20080632 - L1MD1 LINE L1 -383 6253 5768 234 0 0 0 chr5 183004900 183004926 -20080606 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 8225 235 94 33 chr5 183004926 183009101 -20076431 - L1MD1 LINE L1 -868 5768 1140 1686 169 43 35 chr5 183009101 183009473 -20076059 + THE1C LTR MaLR 1 375 0 8225 235 94 33 chr5 183009473 183010669 -20074863 - L1MD1 LINE L1 -5496 1140 19 760 371 26 3 chr5 183011092 183011437 -20074095 + MLT1I LTR MaLR 47 399 -10 2025 305 193 10 chr5 183011503 183012985 -20072547 + L2 LINE L2 1584 3313 0 1161 191 35 9 chr5 183013233 183013463 -20072069 + MER46A DNA MER2_type 1 236 0 629 115 10 0 chr5 183013524 183013620 -20071912 - L1PB4 LINE L1 -2 6154 6058 962 140 6 0 chr5 183013852 183014031 -20071501 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 227 23 11 chr5 183014042 183014130 -20071402 + L1MC4 LINE L1 6614 6702 -1340 967 122 6 14 chr5 183014166 183014530 -20071002 + (TA)n Simple_repeat Simple_repeat 1 361 0 324 198 81 23 chr5 183014541 183014627 -20070905 + L1MC4 LINE L1 6613 6703 -1339 368 100 50 0 chr5 183015009 183015089 -20070443 + (TA)n Simple_repeat Simple_repeat 1 84 0 335 220 22 33 chr5 183015089 183015180 -20070352 + L1MC4 LINE L1 6612 6701 -1341 210 150 0 0 chr5 183015182 183015222 -20070310 + (TA)n Simple_repeat Simple_repeat 2 41 0 227 190 152 0 chr5 183015223 183015302 -20070230 + L1MC4 LINE L1 6612 6702 -1340 1221 189 4 34 chr5 183016573 183016806 -20068726 + 7SLRNA srpRNA srpRNA 1 226 -94 1695 87 8 8 chr5 183016807 183017048 -20068484 + L1PA10 LINE L1 5912 6152 -16 633 178 0 0 chr5 183017123 183017230 -20068302 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 183017304 183017332 -20068200 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr5 183018148 183018181 -20067351 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 386 304 40 56 chr5 183018490 183018722 -20066810 - MIR SINE MIR 0 262 36 1808 209 203 4 chr5 183019225 183019694 -20065838 - MLT1F1 LTR MaLR -1 566 5 350 333 23 34 chr5 183020358 183020535 -20064997 + HAL1 LINE L1 1116 1290 -1217 746 201 24 6 chr5 183021376 183021540 -20063992 + FRAM SINE Alu 2 168 -8 2741 99 5 0 chr5 183021600 183021983 -20063549 - L1PA10 LINE L1 -15 6153 5769 667 261 126 17 chr5 183021992 183022222 -20063310 - L1MC4 LINE L1 -1020 7022 6768 4618 24 9 2 chr5 183022914 183023459 -20062073 - L1PA3 LINE L1 0 6155 5607 3679 87 21 38 chr5 183023459 183023563 -20061969 - L1P4 LINE L1 -398 5770 5666 237 98 0 0 chr5 183023563 183023604 -20061928 + (TA)n Simple_repeat Simple_repeat 2 42 0 3679 87 21 38 chr5 183023604 183024328 -20061204 - L1P4 LINE L1 -502 5666 4948 613 172 35 28 chr5 183024359 183024504 -20061028 + L1MB3 LINE L1 6036 6181 -2 2374 128 48 14 chr5 183024920 183025334 -20060198 - MSTA LTR MaLR 0 428 1 1861 188 11 6 chr5 183025369 183025726 -20059806 - MLT1B LTR MaLR -30 360 2 372 328 40 0 chr5 183026231 183026356 -20059176 - L2 LINE L2 -1 3312 3183 3299 166 74 80 chr5 183026503 183027378 -20058154 + L1MB8 LINE L1 5304 6173 -5 22 35 0 0 chr5 183028474 183028503 -20057029 + AT_rich Low_complexity Low_complexity 1 29 0 234 91 0 0 chr5 183028843 183028876 -20056656 + (CA)n Simple_repeat Simple_repeat 1 33 0 777 317 20 8 chr5 183029686 183029932 -20055600 + MIR SINE MIR 12 260 -2 407 291 75 34 chr5 183029933 183030225 -20055307 - L1ME4a LINE L1 -255 5866 5563 499 270 111 16 chr5 183030996 183031185 -20054347 + MLT1J LTR MaLR 19 225 -286 931 322 45 18 chr5 183031433 183031831 -20053701 + LTR16A LTR ERVL 35 443 -7 371 304 98 47 chr5 183031859 183032073 -20053459 + L2 LINE L2 1992 2216 -1098 408 338 45 13 chr5 183032074 183032189 -20053343 + L2 LINE L2 2664 2787 -527 198 0 0 0 chr5 183032189 183032211 -20053321 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 408 338 45 13 chr5 183032211 183032238 -20053294 + L2 LINE L2 2787 2811 -503 466 306 11 22 chr5 183032238 183032418 -20053114 + MER5B DNA MER1_type 1 178 0 814 320 103 11 chr5 183032427 183032763 -20052769 + L2 LINE L2 2812 3202 -111 2505 197 14 18 chr5 183032763 183033270 -20052262 - MLT1D LTR MaLR 0 505 1 814 320 103 11 chr5 183033270 183033389 -20052143 + L2 LINE L2 3202 3309 -4 218 404 44 0 chr5 183033834 183033948 -20051584 + L2 LINE L2 3154 3272 0 437 229 33 8 chr5 183034180 183034302 -20051230 + L2 LINE L2 2416 2540 -774 606 251 90 60 chr5 183034304 183034677 -20050855 + MLT1J2 LTR MaLR 1 436 -14 318 303 169 28 chr5 183034964 183035218 -20050314 + L2 LINE L2 3023 3312 -1 200 318 9 18 chr5 183035280 183035390 -20050142 + CT-rich Low_complexity Low_complexity 2 110 0 24 67 0 0 chr5 183036269 183036314 -20049218 + AT_rich Low_complexity Low_complexity 1 45 0 252 0 0 0 chr5 183036683 183036711 -20048821 + (TG)n Simple_repeat Simple_repeat 2 29 0 201 296 93 0 chr5 183036716 183036770 -20048762 - L2 LINE L2 -47 3266 3208 228 100 0 0 chr5 183037457 183037497 -20048035 + (CAAAAA)n Simple_repeat Simple_repeat 5 44 0 1858 31 0 0 chr5 183037621 183037847 -20047685 + L1PA4 LINE L1 5930 6155 0 23 33 0 0 chr5 183038200 183038230 -20047302 + AT_rich Low_complexity Low_complexity 1 30 0 238 219 62 0 chr5 183040507 183040571 -20044961 + L3 LINE CR1 792 859 -718 371 288 237 14 chr5 183040740 183040959 -20044573 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 183041017 183041263 -20044269 + AluY SINE Alu 55 300 -11 315 313 23 47 chr5 183041268 183041396 -20044136 + L3 LINE CR1 1383 1507 -70 7545 93 5 19 chr5 183042521 183043593 -20041939 + MER11C LTR ERVK 1 1057 -14 254 302 16 0 chr5 183043681 183043744 -20041788 - MIR SINE MIR -104 104 41 2822 10 0 0 chr5 183044868 183045174 -20040358 - AluYb8 SINE Alu -5 313 8 244 341 124 8 chr5 183046438 183046567 -20038965 - MIR SINE MIR -114 148 5 772 169 62 89 chr5 183047024 183047177 -20038355 - MER20 DNA MER1_type 0 219 72 1912 151 17 0 chr5 183047177 183047475 -20038057 + AluSx SINE Alu 1 303 -9 772 169 62 89 chr5 183047475 183047546 -20037986 - MER20 DNA MER1_type -147 72 1 278 283 8 0 chr5 183047961 183048081 -20037451 + CT-rich Low_complexity Low_complexity 2 122 0 423 349 46 46 chr5 183048094 183048573 -20036959 + L2 LINE L2 2033 2511 -803 886 275 21 9 chr5 183048983 183049216 -20036316 - MIR SINE MIR -26 236 1 611 0 0 0 chr5 183049672 183049740 -20035792 - L1PA4 LINE L1 -181 5974 5907 1348 52 11 0 chr5 183049740 183049911 -20035621 + L1PA4 LINE L1 5980 6155 0 220 312 182 19 chr5 183049927 183050081 -20035451 - MIR SINE MIR -51 211 33 237 329 58 19 chr5 183051462 183051617 -20033915 - MLT1J LTR MaLR -266 245 85 454 279 81 10 chr5 183051947 183052144 -20033388 + MIR SINE MIR 38 248 -14 307 335 60 48 chr5 183052579 183052746 -20032786 + MIR SINE MIR 4 176 -32 207 250 89 0 chr5 183052779 183052835 -20032697 + L2 LINE L2 3193 3253 -19 258 32 0 0 chr5 183054003 183054034 -20031498 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 2173 88 26 19 chr5 183054609 183054916 -20030616 - AluSg SINE Alu -1 309 1 212 337 112 3 chr5 183055246 183055417 -20030115 - MIR3 SINE MIR -58 204 12 198 0 0 0 chr5 183056257 183056279 -20029253 + (TTG)n Simple_repeat Simple_repeat 2 23 0 3153 68 5 2 chr5 183056279 183056690 -20028842 - L1PA5 LINE L1 -14 6140 5729 928 146 121 0 chr5 183056892 183057057 -20028475 + AluJo SINE Alu 121 305 -7 191 318 73 9 chr5 183057334 183057444 -20028088 - MIR SINE MIR -60 202 86 2150 111 14 0 chr5 183057537 183057825 -20027707 - AluSq SINE Alu -21 292 1 631 115 0 0 chr5 183057825 183057912 -20027620 - AluS SINE Alu -225 87 1 2193 122 0 0 chr5 183058057 183058352 -20027180 - AluSx SINE Alu -17 295 1 543 264 52 30 chr5 183058492 183058868 -20026664 - L1MC4 LINE L1 -387 7655 7252 607 182 140 114 chr5 183059217 183059299 -20026233 - L1MC4 LINE L1 -974 7068 6990 2057 117 0 4 chr5 183059299 183059580 -20025952 - AluSx SINE Alu -32 280 1 607 182 140 114 chr5 183059580 183059733 -20025799 - L1MC4 LINE L1 -1052 6990 6827 1983 115 0 26 chr5 183060262 183060567 -20024965 - AluSc SINE Alu -12 297 1 1069 135 34 17 chr5 183060807 183060985 -20024547 + AluSg SINE Alu 1 181 -129 2030 139 7 7 chr5 183061085 183061386 -20024146 - AluSx SINE Alu -11 301 1 205 283 0 0 chr5 183062543 183062589 -20022943 - MER5B DNA MER1_type -131 47 2 256 250 0 0 chr5 183062939 183062999 -20022533 + MLT1K LTR MaLR 510 569 -19 313 289 41 16 chr5 183063004 183063125 -20022407 - MIR SINE MIR -108 154 31 1178 106 6 0 chr5 183063869 183064029 -20021503 - AluYa5 SINE Alu -17 294 134 248 346 38 23 chr5 183064259 183064392 -20021140 - L2 LINE L2 -219 3053 2919 256 342 33 25 chr5 183065818 183065938 -20019594 + MLT1K LTR MaLR 110 230 -358 250 280 87 95 chr5 183066069 183066333 -20019199 - MLT1I LTR MaLR -141 268 7 450 314 33 33 chr5 183067645 183067890 -20017642 - MLT1I LTR MaLR 0 409 165 1615 147 20 0 chr5 183068426 183068671 -20016861 + AluSq SINE Alu 34 283 -30 30 27 0 0 chr5 183068909 183068946 -20016586 + AT_rich Low_complexity Low_complexity 1 37 0 1555 223 69 46 chr5 183069110 183069589 -20015943 - MLT1D LTR MaLR -13 492 3 2230 102 17 0 chr5 183070379 183070673 -20014859 - AluSx SINE Alu -13 299 1 2441 102 11 8 chr5 183071936 183072289 -20013243 - THE1A LTR MaLR -1 354 1 11002 97 21 2 chr5 183072289 183073840 -20011692 - THE1A-int LTR MaLR 0 1580 1 2305 110 14 14 chr5 183073840 183074195 -20011337 - THE1A LTR MaLR 0 355 1 531 202 81 52 chr5 183075829 183076002 -20009530 + L1M4 LINE L1 5052 5229 -917 22 0 0 0 chr5 183076139 183076161 -20009371 + AT_rich Low_complexity Low_complexity 1 22 0 1513 149 8 0 chr5 183076585 183076820 -20008712 - Tigger3(Golem) DNA MER2_type -1 3028 2792 280 288 72 14 chr5 183077287 183077426 -20008106 - L1ME LINE L1 -269 5852 5706 3154 191 87 16 chr5 183077966 183078735 -20006797 - L1MA4 LINE L1 -6 6294 5471 558 126 53 0 chr5 183078795 183078890 -20006642 - L1MB7 LINE L1 -6 6178 6079 1205 251 59 8 chr5 183079074 183079448 -20006084 + L1MC4 LINE L1 7420 7812 -230 238 230 68 0 chr5 183079565 183079639 -20005893 + L1MC4 LINE L1 7824 7902 -140 235 370 0 14 chr5 183080034 183080107 -20005425 - MIR SINE MIR -163 99 28 2325 231 4 35 chr5 183080284 183080833 -20004699 + MLT2B3 LTR ERVL 1 493 -22 182 326 22 34 chr5 183081164 183081253 -20004279 - L2 LINE L2 0 3313 3226 559 329 63 5 chr5 183082080 183082302 -20003230 - MIR SINE MIR -12 250 16 210 271 0 0 chr5 183082374 183082422 -20003110 + L2 LINE L2 3264 3311 -2 220 346 109 52 chr5 183082449 183082816 -20002716 + L2 LINE L2 2926 3313 0 35925 58 1 2 chr5 183083048 183088488 -19997044 + L1PA3 LINE L1 720 6155 0 189 0 0 0 chr5 183089873 183089894 -19995638 + (A)n Simple_repeat Simple_repeat 1 21 0 3630 250 151 19 chr5 183091624 183092759 -19992773 + L1M4b LINE L1 7 1291 -5568 27 73 0 0 chr5 183092815 183092870 -19992662 + AT_rich Low_complexity Low_complexity 1 55 0 484 268 128 55 chr5 183092879 183093043 -19992489 + L1MB8 LINE L1 335 510 -6349 319 168 51 58 chr5 183093055 183093245 -19992287 + (TTATA)n Simple_repeat Simple_repeat 1 188 0 6965 31 14 0 chr5 183093246 183094086 -19991446 - L1PA3 LINE L1 -1193 4953 4102 7560 33 0 0 chr5 183094086 183095289 -19990243 + L1PA3 LINE L1 4949 6151 -4 1683 269 80 45 chr5 183095330 183096196 -19989336 + L1MB8 LINE L1 1334 2229 -4730 * 6070 225 25 12 chr5 183096190 183096963 -19988569 + L1MB8 LINE L1 4587 5349 -1640 2043 173 26 21 chr5 183096963 183097351 -19988181 + MLT1B LTR MaLR 1 390 0 6070 225 25 12 chr5 183097351 183098602 -19986930 + L1MB8 LINE L1 5349 6629 -360 859 122 14 0 chr5 183098613 183098752 -19986780 + AluSg/x SINE Alu 170 310 0 1341 207 77 12 chr5 183098764 183099087 -19986445 + L1MB8 LINE L1 6641 6984 -5 422 339 31 0 chr5 183099808 183099938 -19985594 + L2 LINE L2 3179 3312 -1 387 41 0 0 chr5 183102491 183102540 -19982992 + (CA)n Simple_repeat Simple_repeat 1 49 0 253 396 82 47 chr5 183102704 183103045 -19982487 - L2 LINE L2 -55 3217 2865 2183 126 3 0 chr5 183104010 183104319 -19981213 + AluSx SINE Alu 1 310 -2 2397 116 43 31 chr5 183104504 183104884 -19980648 + MSTA LTR MaLR 1 375 -53 297 68 0 0 chr5 183104884 183104928 -19980604 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1931 148 3 0 chr5 183104928 183105219 -19980313 - AluSq SINE Alu -21 292 1 2397 116 43 31 chr5 183105219 183105260 -19980272 + MSTA LTR MaLR 374 428 0 1553 157 75 0 chr5 183105666 183105786 -19979746 + AluJb SINE Alu 1 111 -201 564 15 0 0 chr5 183105786 183105851 -19979681 + (CA)n Simple_repeat Simple_repeat 2 66 0 1553 157 75 0 chr5 183105851 183105997 -19979535 + AluJb SINE Alu 111 287 -25 39 0 0 0 chr5 183106000 183106039 -19979493 + AT_rich Low_complexity Low_complexity 1 39 0 235 284 39 10 chr5 183106226 183106328 -19979204 + LTR37B LTR ERV1 8 112 -356 710 195 33 57 chr5 183106412 183106754 -19978778 + LTR37A LTR ERV1 125 426 0 24 0 0 0 chr5 183107467 183107491 -19978041 + AT_rich Low_complexity Low_complexity 1 24 0 351 0 0 0 chr5 183107534 183107573 -19977959 + (TG)n Simple_repeat Simple_repeat 1 39 0 1181 138 18 138 chr5 183108991 183109331 -19976201 - L1M1 LINE L1 -738 5562 5264 414 122 353 0 chr5 183109315 183109454 -19976078 + L1MA6 LINE L1 6108 6295 -5 * 21 0 0 0 chr5 183109454 183109475 -19976057 + AT_rich Low_complexity Low_complexity 1 21 0 905 290 118 32 chr5 183109528 183110070 -19975462 + L2 LINE L2 2728 3313 0 389 239 58 111 chr5 183110365 183110608 -19974924 + MLT1I LTR MaLR 60 289 -120 308 309 55 39 chr5 183111348 183111529 -19974003 + MLT1I LTR MaLR 206 389 -20 2290 171 61 14 chr5 183111595 183112035 -19973497 - LOR1b LTR ERV1 0 461 1 615 111 0 0 chr5 183112035 183112125 -19973407 - LOR1b-int LTR ERV1 0 8120 8031 1287 132 123 4 chr5 183112126 183112361 -19973171 - LOR1b-int LTR ERV1 -2057 6063 5801 * 16403 117 19 23 chr5 183112351 183115055 -19970477 - LOR1b-int LTR ERV1 -2596 5524 2833 7015 113 64 12 chr5 183115050 183117396 -19968136 - LOR1b-int LTR ERV1 -5597 2523 1 * 2012 180 59 3 chr5 183117396 183117784 -19967748 - LOR1b LTR ERV1 0 461 52 2940 124 28 0 chr5 183117804 183118273 -19967259 - L1PB1 LINE L1 -8 6143 5662 1504 180 58 14 chr5 183118465 183118743 -19966789 - AluJb SINE Alu -22 290 1 22 35 0 0 chr5 183118747 183118776 -19966756 + AT_rich Low_complexity Low_complexity 1 29 0 601 297 55 38 chr5 183119241 183119531 -19966001 + L2 LINE L2 3014 3308 -5 5026 129 57 58 chr5 183119624 183120753 -19964779 + pTR5 LTR ERV1 1174 2438 0 1771 168 0 13 chr5 183120975 183121284 -19964248 + AluJb SINE Alu 1 305 -7 35 41 0 0 chr5 183121702 183121751 -19963781 + AT_rich Low_complexity Low_complexity 1 49 0 752 217 38 22 chr5 183122416 183122600 -19962932 + MER5A DNA MER1_type 3 189 0 335 261 22 0 chr5 183123304 183123396 -19962136 + L1MC4 LINE L1 6610 6703 -1339 207 186 0 0 chr5 183123396 183123439 -19962093 + (TATG)n Simple_repeat Simple_repeat 3 45 0 257 337 11 0 chr5 183124400 183124499 -19961033 + GA-rich Low_complexity Low_complexity 1 100 0 360 231 113 63 chr5 183124721 183124959 -19960573 - MER113 DNA MER1_type? -46 475 226 252 0 0 0 chr5 183125283 183125311 -19960221 + (TG)n Simple_repeat Simple_repeat 2 29 0 619 200 208 8 chr5 183125459 183125714 -19959818 + MER33 DNA MER1_type 19 324 0 33 0 0 0 chr5 183127406 183127439 -19958093 + AT_rich Low_complexity Low_complexity 1 33 0 2790 200 24 86 chr5 183127849 183129317 -19956215 - L1MC3 LINE L1 -860 6925 5614 1417 77 14 48 chr5 183129429 183129638 -19955894 + MER30 DNA MER1_type 1 202 -28 192 125 0 0 chr5 183129716 183129748 -19955784 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 363 232 118 43 chr5 183130015 183130343 -19955189 - MER113 DNA MER1_type? -83 438 44 2159 114 10 0 chr5 183130774 183131081 -19954451 + AluSx SINE Alu 1 310 -2 321 331 22 7 chr5 183131212 183131348 -19954184 + HAL1b LINE L1 327 464 -884 691 294 16 10 chr5 183131349 183131543 -19953989 + MLT1D LTR MaLR 1 195 -310 1023 124 7 0 chr5 183131547 183131700 -19953832 - AluSx SINE Alu -9 303 150 576 115 0 0 chr5 183131700 183131787 -19953745 - AluSx SINE Alu -226 87 1 568 302 79 9 chr5 183131803 183132018 -19953514 + MLT1D LTR MaLR 191 420 -47 4243 264 38 18 chr5 183132036 183134836 -19950696 + L1PA13 LINE L1 1 3345 -3452 9402 219 22 27 chr5 183135320 183135706 -19949826 + L1PA13 LINE L1 3358 3744 -3053 2723 26 0 0 chr5 183135706 183136017 -19949515 + AluY SINE Alu 1 311 0 9402 219 22 27 chr5 183136017 183137692 -19947840 + L1PA13 LINE L1 3744 5408 -1389 2066 141 33 30 chr5 183137692 183138055 -19947477 + THE1B LTR MaLR 1 364 0 9402 219 22 27 chr5 183138055 183138388 -19947144 + L1PA13 LINE L1 5408 5741 -1056 432 154 49 8 chr5 183138458 183138581 -19946951 + CT-rich Low_complexity Low_complexity 3 130 0 288 105 53 53 chr5 183138581 183138638 -19946894 + MLT2C1 LTR ERVL 341 397 0 2206 96 7 0 chr5 183138693 183138986 -19946546 - AluSc SINE Alu -14 295 1 23 68 0 0 chr5 183138997 183139041 -19946491 + AT_rich Low_complexity Low_complexity 1 44 0 839 48 0 0 chr5 183139075 183139179 -19946353 - L1PA4 LINE L1 -2 6153 6050 899 187 55 22 chr5 183139182 183139364 -19946168 + AluSx SINE Alu 42 229 -83 206 366 40 10 chr5 183140013 183140114 -19945418 + L2 LINE L2 3163 3266 -6 22 0 0 0 chr5 183140250 183140272 -19945260 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 183140730 183140759 -19944773 + AT_rich Low_complexity Low_complexity 1 29 0 2218 93 3 3 chr5 183141674 183141974 -19943558 - AluSq SINE Alu -13 300 1 495 240 32 24 chr5 183142151 183142276 -19943256 - MIR SINE MIR -24 238 113 923 228 39 19 chr5 183142565 183142854 -19942678 - L1MD3 LINE L1 -2 7993 6061 306 143 0 36 chr5 183142864 183142920 -19942612 + L1MC4 LINE L1 6649 6702 -1340 222 333 0 0 chr5 183142928 183143087 -19942445 + (TA)n Simple_repeat Simple_repeat 2 160 0 465 372 0 2 chr5 183143108 183143934 -19941598 + (TA)n Simple_repeat Simple_repeat 1 824 0 328 315 0 0 chr5 183143936 183144025 -19941507 + L1MC4 LINE L1 6615 6703 -1339 234 220 0 0 chr5 183144026 183144085 -19941447 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 250 236 22 22 chr5 183144085 183144174 -19941358 + L1MC4 LINE L1 6614 6702 -1340 354 45 0 0 chr5 183144205 183144249 -19941283 + (CA)n Simple_repeat Simple_repeat 2 45 0 22 56 0 0 chr5 183144388 183144424 -19941108 + AT_rich Low_complexity Low_complexity 1 36 0 225 288 129 30 chr5 183144649 183144781 -19940751 - MIR3 SINE MIR -21 187 43 225 264 11 0 chr5 183145769 183145830 -19939702 + MIR SINE MIR 63 126 -82 346 235 22 0 chr5 183146713 183146849 -19938683 + (TA)n Simple_repeat Simple_repeat 1 139 0 518 340 172 31 chr5 183146935 183147574 -19937958 + L2 LINE L2 2247 2975 -339 290 337 24 0 chr5 183147803 183147886 -19937646 + L2 LINE L2 3184 3268 -4 22 35 0 0 chr5 183148826 183148855 -19936677 + AT_rich Low_complexity Low_complexity 1 29 0 227 93 23 0 chr5 183148936 183148979 -19936553 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 648 289 84 61 chr5 183149295 183150021 -19935511 + L2 LINE L2 2669 3312 -1 1958 117 41 0 chr5 183150205 183150498 -19935034 - AluSx SINE Alu 0 310 7 24 0 0 0 chr5 183151439 183151463 -19934069 + AT_rich Low_complexity Low_complexity 1 24 0 2341 117 31 21 chr5 183151922 183152351 -19933181 + MER4C LTR ERV1 1 388 -77 398 214 0 0 chr5 183152296 183152412 -19933120 - AluJb SINE Alu 0 338 223 * 1384 153 24 48 chr5 183152427 183152676 -19932856 - AluJb SINE Alu -69 243 1 192 40 0 0 chr5 183152679 183152704 -19932828 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 618 51 0 13 chr5 183152705 183152784 -19932748 + MER4C LTR ERV1 388 465 0 21 36 0 0 chr5 183152834 183152862 -19932670 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 183152895 183152942 -19932590 + (CA)n Simple_repeat Simple_repeat 2 48 0 328 49 0 0 chr5 183152944 183152985 -19932547 + MLT2A2 LTR ERVL 413 453 0 2295 67 3 55 chr5 183153174 183153502 -19932030 - AluY SINE Alu 0 311 1 279 322 53 26 chr5 183153685 183153837 -19931695 - L2 LINE L2 0 3313 3158 31 0 0 0 chr5 183154475 183154506 -19931026 + AT_rich Low_complexity Low_complexity 1 31 0 290 118 39 0 chr5 183154511 183154562 -19930970 - L1MB1 LINE L1 -1 5991 5939 416 108 40 0 chr5 183154607 183154681 -19930851 - L1PB3 LINE L1 -2 6152 6076 3015 140 30 8 chr5 183154781 183155288 -19930244 - L1PB3 LINE L1 -45 6109 5592 3379 188 52 1 chr5 183155288 183155979 -19929553 - L1MB1 LINE L1 -37 5955 5230 8283 233 43 83 chr5 183156003 183156555 -19928977 - L1MB1 LINE L1 -841 5129 4556 861 109 29 14 chr5 183156555 183156693 -19928839 - BC200 scRNA scRNA -55 145 6 8283 233 43 83 chr5 183156693 183159229 -19926303 - L1MB1 LINE L1 -1414 4556 2033 2318 87 10 0 chr5 183159232 183159531 -19926001 - AluSq SINE Alu -11 302 1 3977 256 93 33 chr5 183159531 183161819 -19923713 - L1MB1 LINE L1 -3929 2041 2 248 331 57 8 chr5 183161840 183161964 -19923568 - MER102a DNA MER1_type -5 325 196 1795 266 46 39 chr5 183162025 183162638 -19922894 - MLT1E2 LTR MaLR -3 623 7 2536 61 0 6 chr5 183162861 183163173 -19922359 + AluY SINE Alu 1 310 -1 2578 79 6 6 chr5 183163186 183163541 -19921991 - THE1A LTR MaLR 0 355 1 24 91 0 0 chr5 183163880 183163946 -19921586 + AT_rich Low_complexity Low_complexity 1 66 0 378 343 31 23 chr5 183164080 183164306 -19921226 + MIR SINE MIR 17 248 -14 2159 109 0 0 chr5 183164567 183164851 -19920681 + AluY SINE Alu 1 284 -27 265 268 0 24 chr5 183164865 183164988 -19920544 + A-rich Low_complexity Low_complexity 4 123 0 192 179 0 26 chr5 183165154 183165193 -19920339 - MIR3 SINE MIR -13 195 158 610 296 42 71 chr5 183165441 183165844 -19919688 + MLT1I LTR MaLR 2 409 0 198 222 48 48 chr5 183165896 183165959 -19919573 - MIR3 SINE MIR -140 68 6 233 340 189 13 chr5 183166000 183166153 -19919379 - L3 LINE CR1 -24 1553 1374 403 299 24 47 chr5 183166198 183166325 -19919207 - L2 LINE L2 -4 3268 3145 339 290 99 17 chr5 183167310 183167421 -19918111 + MIR SINE MIR 62 194 -68 2568 194 28 4 chr5 183167421 183167881 -19917651 - MER70A LTR ERVL 0 472 2 339 290 99 17 chr5 183167881 183167942 -19917590 + MIR SINE MIR 194 249 -13 646 320 60 16 chr5 183167995 183168245 -19917287 - MIR SINE MIR 0 262 2 184 286 63 0 chr5 183168525 183168588 -19916944 + MIR SINE MIR 80 146 -116 8654 171 37 35 chr5 183168941 183171999 -19913533 - L1MA4A LINE L1 -11 7354 4301 8232 220 75 31 chr5 183172056 183174504 -19911028 - L1MA4A LINE L1 -4731 2478 7 23 33 0 0 chr5 183175461 183175491 -19910041 + AT_rich Low_complexity Low_complexity 1 30 0 1151 50 0 0 chr5 183175494 183175635 -19909897 - L1PA3 LINE L1 -1 6154 6014 455 167 0 0 chr5 183175635 183175719 -19909813 - L1 LINE L1 -1103 5043 4960 809 107 68 198 chr5 183175727 183175990 -19909542 - L1 LINE L1 -1377 4769 4541 * 1906 181 27 18 chr5 183175985 183176601 -19908931 + L1MA4 LINE L1 5047 5665 -640 660 323 114 11 chr5 183176886 183177245 -19908287 - MLT1K LTR MaLR -4 584 189 8527 107 6 25 chr5 183178234 183179574 -19905958 + L1P LINE L1 1427 2740 -3406 1521 116 5 5 chr5 183179677 183179892 -19905640 + AluSq SINE Alu 91 305 -8 1957 128 54 41 chr5 183180216 183180584 -19904948 - THE1C LTR MaLR -2 373 1 16207 35 9 1 chr5 183181099 183183125 -19902407 + L1P LINE L1 2376 4417 -1729 500 277 173 56 chr5 183183245 183183620 -19901912 - L2 LINE L2 -925 2389 1971 246 228 44 61 chr5 183184859 183184973 -19900559 - MER103 DNA DNA -4 162 51 291 337 99 17 chr5 183185190 183185362 -19900170 - L2 LINE L2 -220 3052 2867 324 319 96 73 chr5 183185622 183186250 -19899282 - L2 LINE L2 -946 2368 1727 240 330 135 20 chr5 183186275 183186475 -19899057 - L2 LINE L2 -1726 1588 1366 2409 60 3 10 chr5 183186542 183186843 -19898689 - AluY SINE Alu -6 305 7 817 110 8 0 chr5 183186843 183186961 -19898571 + AluSg/x SINE Alu 189 307 -5 561 140 0 11 chr5 183187285 183187378 -19898154 - AluSg/x SINE Alu 0 310 219 1554 197 16 26 chr5 183187478 183187864 -19897668 + L1MA4 LINE L1 5914 6295 -5 279 98 39 0 chr5 183188937 183188988 -19896544 + AluSc SINE Alu 246 298 -1 5137 168 43 51 chr5 183189218 183189274 -19896258 - L1MC1 LINE L1 -9 6324 6269 2443 69 0 3 chr5 183189274 183189577 -19895955 + AluY SINE Alu 1 302 -9 5137 168 43 51 chr5 183189577 183191009 -19894523 - L1MC1 LINE L1 -64 6269 4831 218 31 0 31 chr5 183191211 183191243 -19894289 + (GGAAA)n Simple_repeat Simple_repeat 5 35 0 2441 113 19 16 chr5 183191418 183191781 -19893751 - THE1B LTR MaLR 0 364 1 23 78 0 0 chr5 183192211 183192262 -19893270 + AT_rich Low_complexity Low_complexity 1 51 0 2923 215 48 25 chr5 183192277 183192918 -19892614 + MER21B LTR ERV1 1 656 -207 330 241 0 0 chr5 183195741 183195849 -19889683 + (TA)n Simple_repeat Simple_repeat 1 108 0 22 0 0 0 chr5 183196885 183196907 -19888625 + AT_rich Low_complexity Low_complexity 1 22 0 235 250 0 0 chr5 183198051 183198099 -19887433 + MER21B LTR ERV1 762 809 -54 313 185 0 31 chr5 183198864 183198929 -19886603 + L2 LINE L2 3251 3313 0 2007 232 56 36 chr5 183199348 183199400 -19886132 - MLT1F1 LTR MaLR -20 547 498 2203 161 59 2 chr5 183199400 183199805 -19885727 + MSTC LTR MaLR 1 428 0 2007 232 56 36 chr5 183199805 183200221 -19885311 - MLT1F1 LTR MaLR -69 498 92 1796 117 87 39 chr5 183200221 183200579 -19884953 + THE1C LTR MaLR 1 375 0 9398 120 39 54 chr5 183200579 183201469 -19884063 + THE1C-int LTR MaLR 1 858 -722 2145 134 0 16 chr5 183201469 183201783 -19883749 + AluSx SINE Alu 1 309 -3 9398 120 39 54 chr5 183201783 183202496 -19883036 + THE1C-int LTR MaLR 858 1580 0 1994 124 55 30 chr5 183202498 183202861 -19882671 + THE1C LTR MaLR 3 374 -1 2007 232 56 36 chr5 183202861 183202921 -19882611 - MLT1F1 LTR MaLR -475 92 3 248 218 0 13 chr5 183203064 183203142 -19882390 + GA-rich Low_complexity Low_complexity 5 81 0 282 300 73 81 chr5 183203226 183203473 -19882059 - MLT1K LTR MaLR -342 246 2 417 20 0 0 chr5 183203484 183203534 -19881998 + (TA)n Simple_repeat Simple_repeat 1 50 0 215 262 49 16 chr5 183203951 183204012 -19881520 + MIR SINE MIR 121 183 -79 788 161 7 21 chr5 183204322 183204465 -19881067 - L1PA16 LINE L1 -9 6157 6017 183 311 0 16 chr5 183204652 183204713 -19880819 - L2 LINE L2 -9 3304 3245 229 227 107 0 chr5 183204747 183204822 -19880710 - Charlie8 DNA MER1_type -2257 160 78 361 278 93 25 chr5 183205315 183205477 -19880055 - MIR SINE MIR -11 251 79 1699 160 115 0 chr5 183207510 183207822 -19877710 + MER7A DNA MER2_type 1 346 0 306 346 22 22 chr5 183207838 183207974 -19877558 + MIR3 SINE MIR 63 198 -10 357 224 133 21 chr5 183208175 183208318 -19877214 + MER117 DNA MER1_type 4 162 -35 22 0 0 0 chr5 183208998 183209020 -19876512 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 183209250 183209273 -19876259 + AT_rich Low_complexity Low_complexity 1 23 0 1904 138 40 57 chr5 183209392 183209762 -19875770 - THE1B LTR MaLR 0 364 1 1229 303 36 39 chr5 183210697 183211258 -19874274 + L2 LINE L2 2132 2690 -624 26 50 0 0 chr5 183211364 183211404 -19874128 + AT_rich Low_complexity Low_complexity 1 40 0 2105 103 0 0 chr5 183211422 183211716 -19873816 - AluY SINE Alu 0 305 12 22 35 0 0 chr5 183211788 183211817 -19873715 + AT_rich Low_complexity Low_complexity 1 29 0 4333 137 30 3 chr5 183212289 183212989 -19872543 - LTR62 LTR ERVK 0 719 1 2002 146 41 24 chr5 183214179 183214548 -19870984 + THE1C LTR MaLR 1 375 0 10177 197 37 68 chr5 183214859 183220511 -19865021 + L1MA4 LINE L1 5 6265 -1300 1404 144 144 27 chr5 183220543 183220841 -19864691 + THE1C LTR MaLR 3 335 -40 12179 126 11 26 chr5 183220841 183223374 -19862158 - L1PA7 LINE L1 -3911 2550 2 20849 98 5 3 chr5 183223378 183227243 -19858289 + L1PA7 LINE L1 2568 6462 -7 319 125 18 18 chr5 183227295 183227351 -19858181 + THE1C LTR MaLR 373 428 0 5322 170 40 5 chr5 183227351 183228757 -19856775 + L1MA4 LINE L1 6263 7710 -9 1260 130 0 16 chr5 183229104 183229289 -19856243 + AluSg SINE Alu 1 182 -128 443 228 55 104 chr5 183229373 183229680 -19855852 + L1MC5 LINE L1 7625 7916 -45 237 65 0 0 chr5 183229787 183229818 -19855714 + (GGA)n Simple_repeat Simple_repeat 3 33 0 998 227 45 56 chr5 183230051 183230556 -19854976 + MER39 LTR ERV1 1 542 0 270 312 0 26 chr5 183230918 183230995 -19854537 + MER89-int LTR ERV1 566 640 -6161 484 193 71 123 chr5 183231095 183231307 -19854225 + MER89-int LTR ERV1 1367 1567 -4764 3830 193 118 69 chr5 183231428 183232599 -19852933 + MER89-int LTR ERV1 292 1519 -3417 1074 129 22 6 chr5 183232623 183232801 -19852731 - L1MA8 LINE L1 -325 5966 5786 258 156 0 0 chr5 183232807 183232852 -19852680 + (CATA)n Simple_repeat Simple_repeat 3 47 0 421 150 20 20 chr5 183232854 183232954 -19852578 + GA-rich Low_complexity Low_complexity 3 102 0 705 159 0 0 chr5 183232954 183233086 -19852446 + L1MA9 LINE L1 6171 6302 -10 24 77 0 0 chr5 183233129 183233181 -19852351 + AT_rich Low_complexity Low_complexity 1 52 0 256 274 12 12 chr5 183233766 183233850 -19851682 + (TATATG)n Simple_repeat Simple_repeat 1 84 0 246 236 22 22 chr5 183233850 183233939 -19851593 + L1MC4 LINE L1 6615 6703 -1339 207 162 0 0 chr5 183233941 183233978 -19851554 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 1529 121 5 9 chr5 183234136 183234360 -19851172 - MER4B LTR ERV1 0 610 388 323 197 8 13 chr5 183234392 183234514 -19851018 - MER4A LTR ERV1 -223 441 262 454 96 169 0 chr5 183234514 183234597 -19850935 - MER4A LTR ERV1 -567 97 1 264 282 77 13 chr5 183234785 183234941 -19850591 - L1M4 LINE L1 -1494 4652 4487 338 243 162 12 chr5 183235584 183235757 -19849775 - L1M4 LINE L1 -2208 3938 3740 22 35 0 0 chr5 183236010 183236039 -19849493 + AT_rich Low_complexity Low_complexity 1 29 0 453 273 72 0 chr5 183236940 183237079 -19848453 + MIR SINE MIR 103 251 -11 236 143 48 0 chr5 183237074 183237116 -19848416 - L2 LINE L2 -7 3306 3263 * 747 250 99 10 chr5 183237151 183237443 -19848089 + L1ME1 LINE L1 4055 4372 -1774 225 250 0 0 chr5 183237560 183237616 -19847916 - L1MC4 LINE L1 -1339 6703 6648 1383 171 151 0 chr5 183238081 183238379 -19847153 - MER2 DNA MER2_type -1 343 1 2710 250 48 16 chr5 183238401 183239327 -19846205 + L1ME1 LINE L1 5208 6161 -5 22 70 0 0 chr5 183240172 183240215 -19845317 + AT_rich Low_complexity Low_complexity 1 43 0 1965 121 13 25 chr5 183240304 183240619 -19844913 - AluSq SINE Alu -2 311 1 30 45 0 0 chr5 183240730 183240774 -19844758 + AT_rich Low_complexity Low_complexity 1 44 0 345 338 155 0 chr5 183240922 183241070 -19844462 - MIR SINE MIR -77 185 15 231 146 0 0 chr5 183242062 183242103 -19843429 + (CA)n Simple_repeat Simple_repeat 2 42 0 29 28 0 0 chr5 183242182 183242218 -19843314 + AT_rich Low_complexity Low_complexity 1 36 0 185 328 49 0 chr5 183242317 183242378 -19843154 - L2 LINE L2 0 3313 3250 273 233 92 67 chr5 183243420 183243540 -19841992 + MIR3 SINE MIR 83 205 -3 2801 198 30 18 chr5 183243658 183244258 -19841274 - L1P LINE L1 -5529 617 11 1959 126 0 0 chr5 183244302 183244564 -19840968 + AluSc SINE Alu 1 262 -47 987 124 41 0 chr5 183244565 183244710 -19840822 - AluSg SINE Alu -159 151 1 1770 170 29 35 chr5 183245101 183245478 -19840054 - THE1C LTR MaLR 0 375 1 8739 155 10 41 chr5 183245478 183247106 -19838426 - THE1C-int LTR MaLR 0 1580 4 1631 175 67 31 chr5 183247109 183247469 -19838063 - THE1C LTR MaLR 0 375 3 1637 170 75 31 chr5 183248015 183248374 -19837158 + THE1C LTR MaLR 1 375 0 8736 155 9 48 chr5 183248376 183250018 -19835514 + THE1C-int LTR MaLR 3 1580 0 1420 142 208 35 chr5 183250020 183250338 -19835194 + THE1C LTR MaLR 3 375 0 920 191 19 0 chr5 183251026 183251183 -19834349 - AluJo SINE Alu -152 160 1 1875 176 3 6 chr5 183251274 183251614 -19833918 - MER46B DNA MER2_type -21 215 2 247 196 71 0 chr5 183251569 183251625 -19833907 + MER46A DNA MER2_type 99 158 -78 * 184 298 18 18 chr5 183251626 183251683 -19833849 - MIR SINE MIR -62 146 90 7390 32 9 9 chr5 183251772 183252951 -19832581 - L1PA4 LINE L1 -3 6152 4974 8145 29 11 0 chr5 183252951 183253928 -19831604 + L1PA4 LINE L1 3998 4985 -1161 1740 132 4 4 chr5 183254745 183255002 -19830530 - AluSq SINE Alu -20 293 37 2308 217 16 8 chr5 183255130 183255618 -19829914 + LTR53 LTR ERVL 8 499 -20 1030 208 82 44 chr5 183255618 183256002 -19829530 + MSTC LTR MaLR 1 428 0 320 394 14 14 chr5 183256154 183256296 -19829236 - MIR SINE MIR -119 143 2 1967 148 10 0 chr5 183256998 183257288 -19828244 - AluSx SINE Alu -19 293 1 288 0 0 0 chr5 183257622 183257654 -19827878 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 382 38 8 chr5 183257775 183257906 -19827626 - L2 LINE L2 -1 3271 3137 274 276 106 50 chr5 183257925 183258102 -19827430 + L2 LINE L2 3102 3293 -20 2611 213 8 55 chr5 183258102 183258735 -19826797 - MER77 LTR ERV1 -2 603 1 274 276 106 50 chr5 183258735 183258756 -19826776 + L2 LINE L2 3293 3311 -2 293 309 177 37 chr5 183259203 183259497 -19826035 - L2 LINE L2 -1 3312 2978 192 269 269 0 chr5 183261158 183261251 -19824281 - L2 LINE L2 -3 3310 3193 1651 232 76 76 chr5 183262246 183262953 -19822579 - MER61E LTR ERV1 -4 773 10 224 245 94 0 chr5 183263563 183263616 -19821916 + MIR SINE MIR 62 119 -143 248 392 20 0 chr5 183263635 183263737 -19821795 - L2 LINE L2 -24 3289 3186 21 0 0 0 chr5 183264927 183264948 -19820584 + AT_rich Low_complexity Low_complexity 1 21 0 232 196 0 0 chr5 183265150 183265196 -19820336 - Alu SINE Alu -9 293 248 951 344 43 38 chr5 183265259 183265824 -19819708 + L2 LINE L2 2568 3144 -169 1444 308 65 40 chr5 183265892 183266492 -19819040 - MER115 DNA AcHobo -48 645 31 230 245 0 0 chr5 183266610 183266663 -19818869 + L2 LINE L2 3261 3313 0 25 0 0 0 chr5 183266674 183266699 -19818833 + AT_rich Low_complexity Low_complexity 1 25 0 1728 144 141 44 chr5 183267277 183267667 -19817865 - MSTA LTR MaLR 0 428 1 375 326 114 70 chr5 183267803 183268205 -19817327 + L2 LINE L2 2552 3002 -311 1656 207 71 3 chr5 183268205 183268543 -19816989 - MLT1A1 LTR MaLR 0 365 5 375 326 114 70 chr5 183268543 183268870 -19816662 + L2 LINE L2 3002 3313 0 276 310 52 43 chr5 183268914 183269030 -19816502 - MIR SINE MIR -116 146 30 960 182 51 28 chr5 183270623 183270837 -19814695 + MER20 DNA MER1_type 1 219 0 2233 101 0 7 chr5 183272755 183273051 -19812481 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr5 183273162 183273184 -19812348 + AT_rich Low_complexity Low_complexity 1 22 0 273 218 77 13 chr5 183273319 183273397 -19812135 + MLT1K LTR MaLR 351 433 -155 201 420 10 40 chr5 183273426 183273626 -19811906 - L2 LINE L2 -528 2786 2593 371 248 109 74 chr5 183273705 183273907 -19811625 + L2 LINE L2 3105 3313 0 2051 101 3 3 chr5 183273941 183274229 -19811303 + AluY SINE Alu 1 288 -23 2000 90 0 87 chr5 183275020 183275343 -19810189 - AluSg SINE Alu -15 295 1 223 286 95 12 chr5 183277105 183277189 -19808343 - MIR SINE MIR -79 129 39 1140 136 15 0 chr5 183278302 183278501 -19807031 + L1MA2 LINE L1 6101 6302 -2 231 283 90 75 chr5 183278640 183278852 -19806680 - L2 LINE L2 -660 2654 2440 313 369 45 34 chr5 183279168 183279344 -19806188 - MIR3 SINE MIR -25 183 6 347 240 143 29 chr5 183279579 183279754 -19805778 - MIR SINE MIR -34 228 34 378 248 43 64 chr5 183280844 183280985 -19804547 - MER63 DNA MER1_type -272 790 27 720 233 0 27 chr5 183281292 183281442 -19804090 - MER5A DNA MER1_type -43 146 1 22 0 0 0 chr5 183281483 183281505 -19804027 + AT_rich Low_complexity Low_complexity 1 22 0 1868 150 23 3 chr5 183281541 183281841 -19803691 + AluSx SINE Alu 1 306 -6 240 86 0 0 chr5 183281980 183282015 -19803517 + (TC)n Simple_repeat Simple_repeat 2 36 0 333 93 0 0 chr5 183282023 183282077 -19803455 + (CA)n Simple_repeat Simple_repeat 2 55 0 378 266 42 42 chr5 183282447 183282590 -19802942 - L2 LINE L2 -6 3307 3165 223 285 89 79 chr5 183282800 183283091 -19802441 - L2 LINE L2 -339 2975 2682 378 226 57 0 chr5 183283091 183283197 -19802335 + Charlie5 DNA MER1_type 2450 2561 -51 974 219 88 0 chr5 183283456 183283739 -19801793 - MER33 DNA MER1_type -16 308 1 188 377 85 9 chr5 183283740 183283846 -19801686 + MIR SINE MIR 32 145 -63 21 0 0 0 chr5 183284179 183284200 -19801332 + AT_rich Low_complexity Low_complexity 1 21 0 1436 204 3 39 chr5 183284471 183284780 -19800752 - AluJo SINE Alu -14 298 1 3556 163 25 57 chr5 183285277 183286028 -19799504 - L1MB3 LINE L1 -40 6143 5417 313 167 0 19 chr5 183286152 183286206 -19799326 + Tigger5 DNA MER2_type 3 55 -2268 511 186 0 0 chr5 183286216 183286302 -19799230 + Tigger5 DNA MER2_type 2237 2322 -1 247 268 31 93 chr5 183286314 183286411 -19799121 + MLT1H LTR MaLR 255 345 -204 1419 223 69 35 chr5 183288006 183288359 -19797173 + Charlie4a DNA MER1_type 14 389 -1572 2807 3 0 3 chr5 183288359 183288665 -19796867 - AluY SINE Alu -6 305 1 1419 223 69 35 chr5 183288665 183288790 -19796742 + Charlie4a DNA MER1_type 389 508 0 2496 103 19 5 chr5 183289693 183290061 -19795471 - THE1C LTR MaLR -2 373 1 1421 194 104 24 chr5 183290073 183290409 -19795123 - MLT1A1 LTR MaLR 0 365 3 251 245 78 29 chr5 183291967 183291998 -19793534 + MER96 DNA MER1_type? 63 91 -84 1947 155 0 3 chr5 183291998 183292294 -19793238 + AluSx SINE Alu 3 297 -15 251 245 78 29 chr5 183292294 183292364 -19793168 + MER96 DNA MER1_type? 91 169 -6 189 373 133 19 chr5 183292431 183292589 -19792943 + MER5A DNA MER1_type 1 176 -13 2207 104 0 10 chr5 183292688 183292985 -19792547 + AluY SINE Alu 1 294 -17 2185 97 0 3 chr5 183294250 183294538 -19790994 + AluY SINE Alu 3 289 -22 696 299 122 20 chr5 183294752 183295096 -19790436 - MLT1K LTR MaLR -135 453 75 195 42 0 0 chr5 183295492 183295516 -19790016 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 277 274 85 120 chr5 183295663 183295922 -19789610 - MLT1J LTR MaLR -227 284 35 182 274 20 0 chr5 183296399 183296450 -19789082 + MIR SINE MIR 73 124 -84 310 307 38 28 chr5 183296498 183296686 -19788846 - MER5A DNA MER1_type -32 292 6 1692 185 7 0 chr5 183296770 183297056 -19788476 - AluJb SINE Alu -24 288 1 24 0 0 0 chr5 183297073 183297097 -19788435 + AT_rich Low_complexity Low_complexity 1 24 0 236 304 0 0 chr5 183297199 183297255 -19788277 + polypyrimidine Low_complexity Low_complexity 1 56 0 3961 56 2 0 chr5 183298464 183298964 -19786568 + L1PA8 LINE L1 5658 6158 -14 336 48 0 0 chr5 183299109 183299151 -19786381 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 514 271 110 41 chr5 183300795 183301431 -19784101 - L1ME2 LINE L1 -280 5884 5170 1933 105 4 4 chr5 183301440 183301707 -19783825 + AluSg SINE Alu 22 288 -22 588 301 139 30 chr5 183302103 183302442 -19783090 + L2 LINE L2 2938 3313 0 686 155 23 16 chr5 183302730 183303032 -19782500 + GA-rich Low_complexity Low_complexity 1 304 0 252 59 0 0 chr5 183304503 183304537 -19780995 + (CA)n Simple_repeat Simple_repeat 1 34 0 216 143 0 0 chr5 183304550 183304592 -19780940 + (GA)n Simple_repeat Simple_repeat 2 43 0 596 332 106 40 chr5 183304838 183305263 -19780269 - Charlie8 DNA MER1_type -1929 488 36 198 214 155 48 chr5 183305326 183305410 -19780122 + MIR SINE MIR 49 141 -121 332 206 0 0 chr5 183305738 183305811 -19779721 - MLT1L LTR MaLR -17 598 526 262 239 28 28 chr5 183306079 183306150 -19779382 - MLT1K LTR MaLR -375 213 143 2430 197 16 35 chr5 183306247 183306740 -19778792 - MLT2B3 LTR ERVL 0 554 71 1082 200 59 5 chr5 183306831 183306895 -19778637 - Ricksha DNA DNA -1630 416 341 1496 168 4 4 chr5 183306895 183307157 -19778375 - ERVL-B3 LTR ERVL 0 5764 5503 2104 106 3 0 chr5 183307262 183307589 -19777943 - AluSp SINE Alu 0 328 1 407 91 0 0 chr5 183307678 183307733 -19777799 + Alu SINE Alu 1 55 -247 225 214 0 18 chr5 183307855 183307911 -19777621 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 183307941 183307997 -19777535 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 183308027 183308083 -19777449 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 183308070 183308126 -19777406 + L1MC4 LINE L1 6648 6702 -1340 225 214 0 18 chr5 183308156 183308212 -19777320 + L1MC4 LINE L1 6648 6702 -1340 316 299 28 9 chr5 183308263 183308370 -19777162 + L1MC4 LINE L1 6595 6703 -1339 191 143 0 24 chr5 183308675 183308717 -19776815 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 2177 125 3 0 chr5 183309270 183309567 -19775965 + AluSx SINE Alu 2 299 -13 26 50 0 0 chr5 183309685 183309725 -19775807 + AT_rich Low_complexity Low_complexity 1 40 0 398 225 106 83 chr5 183309769 183309987 -19775545 + MER39-int LTR ERV1 1532 1754 -3182 37 23 0 0 chr5 183309992 183310036 -19775496 + AT_rich Low_complexity Low_complexity 1 44 0 291 215 70 44 chr5 183310087 183310245 -19775287 + MER39-int LTR ERV1 1802 1963 -2973 811 250 55 5 chr5 183310278 183310498 -19775034 + MER39-int LTR ERV1 1938 2168 -2768 1076 118 31 0 chr5 183310546 183310707 -19774825 - MER41D LTR ERV1 -391 166 1 279 0 0 0 chr5 183310830 183310861 -19774671 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3712 27 0 0 chr5 183310861 183311299 -19774233 - L1PA4 LINE L1 -18 6137 5700 5563 198 54 71 chr5 183311319 183311427 -19774105 + MER39-int LTR ERV1 3313 3421 -2910 3355 161 9 0 chr5 183311427 183311979 -19773553 - MER41D LTR ERV1 0 557 1 5563 198 54 71 chr5 183311979 183313502 -19772030 + MER39-int LTR ERV1 3421 6186 -145 611 267 91 60 chr5 183313559 183314036 -19771496 + MER39 LTR ERV1 5 542 0 22 0 0 0 chr5 183314221 183314243 -19771289 + AT_rich Low_complexity Low_complexity 1 22 0 9233 176 21 4 chr5 183316819 183318660 -19766872 - L1 LINE L1 -1299 4847 2975 440 272 92 44 chr5 183318765 183319059 -19766473 + L1ME4a LINE L1 5575 5825 -296 1164 336 63 22 chr5 183319169 183320071 -19765461 + L1MEc LINE L1 334 1272 -5291 655 194 92 114 chr5 183320202 183320297 -19765235 + L1MA9 LINE L1 6008 6104 -208 2520 113 0 8 chr5 183320297 183320686 -19764846 + L1PB1 LINE L1 5762 6147 -4 655 194 92 114 chr5 183320686 183320863 -19764669 + L1MA9 LINE L1 6104 6274 -38 * 689 299 139 33 chr5 183320850 183321575 -19763957 + L1MEc LINE L1 1202 2110 -4453 417 273 67 5 chr5 183321597 183321806 -19763726 + L1MEc LINE L1 2170 2391 -4172 222 116 0 0 chr5 183371899 183371942 -19713590 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr5 183372205 183372230 -19713302 + AT_rich Low_complexity Low_complexity 1 25 0 1557 113 22 13 chr5 183374467 183374697 -19710835 + AluSg/x SINE Alu 80 311 -1 223 255 145 35 chr5 183375050 183375195 -19710337 + L2 LINE L2 2989 3149 -164 205 29 59 0 chr5 183376303 183376337 -19709195 + (GAA)n Simple_repeat Simple_repeat 2 37 0 225 191 0 0 chr5 183376532 183376579 -19708953 + A-rich Low_complexity Low_complexity 4 50 0 201 78 39 39 chr5 183378419 183378470 -19707062 + (CACAA)n Simple_repeat Simple_repeat 3 53 0 240 211 32 21 chr5 183387825 183387920 -19697612 + (CA)n Simple_repeat Simple_repeat 1 96 0 207 0 0 0 chr5 183391837 183391860 -19693672 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 35 24 0 0 chr5 183398593 183398635 -19686897 + AT_rich Low_complexity Low_complexity 1 42 0 201 236 0 14 chr5 183399245 183399317 -19686215 + (TTGG)n Simple_repeat Simple_repeat 1 71 0 591 217 80 9 chr5 183405439 183405651 -19679881 + HERVH LTR ERV1 4586 4812 -2901 * 5352 129 22 1 chr5 183405650 183406540 -19678992 + HERVH LTR ERV1 5108 6016 -1697 3503 95 9 28 chr5 183406533 183407101 -19678431 + HERVH LTR ERV1 7157 7713 0 * 419 158 110 8 chr5 183407101 183407233 -19678299 + LTR7 LTR ERV1 1 206 -244 613 319 8 17 chr5 183408436 183408677 -19676855 + L2 LINE L2 1715 1953 -1361 24 0 0 0 chr5 183410751 183410775 -19674757 + AT_rich Low_complexity Low_complexity 1 24 0 1719 141 3 42 chr5 183411685 183411997 -19673535 - AluSx SINE Alu -10 302 3 510 151 28 19 chr5 183412235 183412341 -19673191 - LTR43 LTR ERV1 -320 282 176 218 291 35 70 chr5 183412882 183412968 -19672564 + MIR SINE MIR 28 110 -152 664 199 22 0 chr5 183413393 183413529 -19672003 + MER105 DNA DNA 1 139 -65 326 265 69 87 chr5 183413957 183414130 -19671402 + MIR SINE MIR 23 190 -63 5550 25 3 0 chr5 183414420 183415109 -19670423 + L1PA4 LINE L1 5497 6187 0 24 32 0 0 chr5 183415144 183415175 -19670357 + AT_rich Low_complexity Low_complexity 1 31 0 665 263 15 83 chr5 183415763 183416029 -19669503 + L2 LINE L2 2343 2590 -724 3033 82 19 0 chr5 183416198 183416614 -19668918 + L1PA10 LINE L1 5743 6166 -2 323 355 7 7 chr5 183416723 183416861 -19668671 + L2 LINE L2 2577 2714 -600 1723 186 18 34 chr5 183416862 183417248 -19668284 + MER31B LTR ERV1 3 382 -84 640 310 49 85 chr5 183417252 183417820 -19667712 + L2 LINE L2 2656 3201 -112 2246 128 0 0 chr5 183417820 183418117 -19667415 + AluSx SINE Alu 1 297 -15 640 310 49 85 chr5 183418117 183418227 -19667305 + L2 LINE L2 3201 3313 0 754 277 84 20 chr5 183418229 183418669 -19666863 + MER113 DNA MER1_type? 47 514 -7 976 155 0 0 chr5 183418996 183419151 -19666381 + AluSg/x SINE Alu 145 299 -13 349 354 97 6 chr5 183419860 183420035 -19665497 + MIR SINE MIR 60 250 -12 1110 146 55 146 chr5 183420065 183420393 -19665139 + AluJo SINE Alu 3 300 -2 270 315 0 0 chr5 183420551 183420624 -19664908 + L2 LINE L2 2988 3060 -253 180 139 28 0 chr5 183420831 183420867 -19664665 + L2 LINE L2 3276 3312 -1 28 48 0 0 chr5 183420933 183420975 -19664557 + AT_rich Low_complexity Low_complexity 1 42 0 415 241 16 60 chr5 183421328 183421544 -19663988 + L1MCa LINE L1 43 176 -5869 377 171 13 0 chr5 183421581 183421657 -19663875 - MLT1E2 LTR MaLR -1 625 549 384 173 127 0 chr5 183421659 183421769 -19663763 + L1MC3 LINE L1 6980 7103 -682 226 250 0 60 chr5 183421772 183421856 -19663676 + MLT1L LTR MaLR 45 123 -444 2231 184 65 23 chr5 183421857 183422438 -19663094 + L1MC3 LINE L1 6110 6344 0 862 284 39 37 chr5 183422888 183423297 -19662235 + MLT1L LTR MaLR 201 610 -5 304 346 39 32 chr5 183423493 183423649 -19661883 + MER5B DNA MER1_type 22 178 0 27 49 0 0 chr5 183424017 183424058 -19661474 + AT_rich Low_complexity Low_complexity 1 41 0 284 242 40 30 chr5 183424346 183424445 -19661087 - L2 LINE L2 0 3313 3214 2066 165 46 13 chr5 183424466 183424856 -19660676 + MSTB LTR MaLR 1 403 -23 1418 106 60 0 chr5 183424856 183425073 -19660459 - MER30 DNA MER1_type 0 230 1 3141 286 76 64 chr5 183425223 183425416 -19660116 - L2 LINE L2 -201 3112 2923 2258 106 13 0 chr5 183425416 183425717 -19659815 - AluSp SINE Alu -8 305 1 3141 286 76 64 chr5 183425717 183427166 -19658366 - L2 LINE L2 -390 2923 1447 397 291 134 18 chr5 183427592 183427815 -19657717 + L1MC/D LINE L1 5405 5653 -2155 360 0 0 0 chr5 183428327 183428367 -19657165 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 127 63 32 chr5 183428386 183428449 -19657083 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 24 0 0 0 chr5 183428608 183428632 -19656900 + AT_rich Low_complexity Low_complexity 1 24 0 1430 203 24 17 chr5 183428735 183429030 -19656502 + AluJo SINE Alu 3 299 -13 200 336 69 35 chr5 183429262 183429378 -19656154 - L2 LINE L2 -12 3260 3141 252 289 94 27 chr5 183429748 183429897 -19655635 - MIR SINE MIR 0 262 104 382 343 43 25 chr5 183430327 183430767 -19654765 - MLT1K LTR MaLR -63 525 43 760 304 54 54 chr5 183430917 183431309 -19654223 - LTR16A LTR ERVL -7 443 52 563 336 35 30 chr5 183431736 183432102 -19653430 - HERV16 LTR ERVL -687 5077 4710 752 332 70 18 chr5 183432127 183432585 -19652947 - HERV16 LTR ERVL -1052 4602 4121 248 260 27 0 chr5 183432694 183432767 -19652765 + L1MEc LINE L1 29 103 -6293 1160 196 18 9 chr5 183432929 183433255 -19652277 + L1MEc LINE L1 2123 2451 -3945 2252 108 3 10 chr5 183433316 183433630 -19651902 - AluSp SINE Alu -1 312 1 959 319 44 41 chr5 183433631 183433681 -19651851 - HERV16 LTR ERVL -4350 646 598 2156 108 0 11 chr5 183433681 183433991 -19651541 - AluSx SINE Alu 0 307 1 959 319 44 41 chr5 183433991 183434547 -19650985 - HERV16 LTR ERVL -4398 598 37 810 332 62 6 chr5 183434588 183434928 -19650604 - LTR16A LTR ERVL -6 444 86 11769 69 12 1 chr5 183435948 183436607 -19648925 - L1PA6 LINE L1 -2 6152 5502 2346 90 0 0 chr5 183436607 183436907 -19648625 - AluY SINE Alu -11 300 1 11769 69 12 1 chr5 183436907 183438585 -19646947 - L1PA6 LINE L1 -652 5502 3796 17915 90 16 9 chr5 183438586 183441329 -19644203 + L1PA6 LINE L1 1046 3808 -2338 5168 165 20 17 chr5 183442653 183444307 -19641225 + L1MA8 LINE L1 4614 6268 -23 342 0 0 0 chr5 183444480 183444518 -19641014 + (CA)n Simple_repeat Simple_repeat 1 38 0 353 39 20 0 chr5 183444582 183444633 -19640899 + (TA)n Simple_repeat Simple_repeat 2 53 0 695 290 122 24 chr5 183445298 183445626 -19639906 - MLT1I LTR MaLR -8 401 42 774 208 27 16 chr5 183445954 183446137 -19639395 + MLT1B LTR MaLR 1 185 -189 452 156 32 26 chr5 183446137 183446291 -19639241 + CT-rich Low_complexity Low_complexity 1 155 0 822 206 17 6 chr5 183446292 183446493 -19639039 + MLT1B LTR MaLR 173 390 0 339 272 10 10 chr5 183446493 183446596 -19638936 + LTR33 LTR ERVL 419 521 0 332 266 43 71 chr5 183446776 183446960 -19638572 + MIR SINE MIR 1 179 -83 337 317 90 6 chr5 183447816 183447983 -19637549 + MIR SINE MIR 79 259 -3 2234 212 19 64 chr5 183448287 183448862 -19636670 + MLT2B3 LTR ERVL 6 554 0 1759 88 4 0 chr5 183450546 183450774 -19634758 - AluSg SINE Alu -81 229 1 21 36 0 0 chr5 183450794 183450822 -19634710 + AT_rich Low_complexity Low_complexity 1 28 0 240 229 33 0 chr5 183451023 183451084 -19634448 + L1MC4 LINE L1 7531 7593 -449 251 150 17 0 chr5 183451091 183451151 -19634381 + GA-rich Low_complexity Low_complexity 2 62 0 2739 210 32 32 chr5 183451157 183451866 -19633666 + L1ME1 LINE L1 5448 6156 -10 242 91 0 0 chr5 183452285 183452318 -19633214 + MLT1A2 LTR MaLR 342 374 0 421 289 58 0 chr5 183452318 183452439 -19633093 - MIR SINE MIR -113 149 22 226 186 186 0 chr5 183452453 183452512 -19633020 - MER102a DNA MER1_type -17 313 244 343 307 105 34 chr5 183453487 183453725 -19631807 - MIR SINE MIR -1 261 3 374 276 8 45 chr5 183453886 183454020 -19631512 - MER5A DNA MER1_type -24 165 37 205 299 63 116 chr5 183454689 183454990 -19630542 + L2 LINE L2 223 507 -2807 437 375 33 5 chr5 183455317 183455501 -19630031 + MIR SINE MIR 8 196 -66 281 303 29 77 chr5 183455520 183455728 -19629804 - MLT1K LTR MaLR -19 569 392 237 177 0 32 chr5 183456881 183456943 -19628589 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 1446 191 46 32 chr5 183458125 183458408 -19627124 - AluJo SINE Alu -25 287 1 4086 197 34 28 chr5 183459726 183460572 -19624960 - MER21B LTR ERV1 -11 852 2 299 95 0 0 chr5 183461079 183461121 -19624411 + Tigger5 DNA MER2_type 15 56 -2267 458 158 24 0 chr5 183461124 183461206 -19624326 + Tigger5 DNA MER2_type 2231 2314 -9 3227 58 0 5 chr5 183461520 183461931 -19623601 - L1PA7 LINE L1 -2 6152 5744 529 227 47 35 chr5 183462714 183462886 -19622646 - MLT1K LTR MaLR -18 570 397 1758 129 108 0 chr5 183463051 183463329 -19622203 - AluSx SINE Alu -4 308 1 1278 165 0 24 chr5 183463375 183463587 -19621945 + AluSx SINE Alu 3 209 -103 379 98 0 0 chr5 183463590 183463641 -19621891 + L1PA5 LINE L1 5 55 -6091 38521 74 2 3 chr5 183463643 183469584 -19615948 + L1PA5 LINE L1 221 6154 0 642 162 0 17 chr5 183469584 183469701 -19615831 + AluSx SINE Alu 192 306 -6 400 343 134 9 chr5 183469853 183470069 -19615463 + MIR SINE MIR 20 262 0 2241 119 0 0 chr5 183470230 183470532 -19615000 + AluSx SINE Alu 1 302 -10 1756 168 7 7 chr5 183470575 183470867 -19614665 - AluJo SINE Alu -14 298 7 310 322 0 0 chr5 183471454 183471541 -19613991 - MIR3 SINE MIR -3 205 119 226 260 77 58 chr5 183472347 183472451 -19613081 + L1M4b LINE L1 159 264 -6595 2582 33 0 3 chr5 183472596 183472900 -19612632 + AluY SINE Alu 1 303 -8 266 310 195 10 chr5 183472958 183473255 -19612277 + L1M4b LINE L1 837 1188 -5667 708 45 0 0 chr5 183473297 183473385 -19612147 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 22 0 0 0 chr5 183474384 183474406 -19611126 + AT_rich Low_complexity Low_complexity 1 22 0 321 261 33 0 chr5 183475377 183475469 -19610063 + L1MC4a LINE L1 5355 5449 -2336 351 271 23 15 chr5 183475660 183475793 -19609739 + L1MC4a LINE L1 5752 5885 -1923 22 0 0 0 chr5 183476651 183476673 -19608859 + AT_rich Low_complexity Low_complexity 1 22 0 320 314 127 27 chr5 183477090 183477310 -19608222 - MIR SINE MIR -19 243 2 1294 82 174 0 chr5 183477577 183477773 -19607759 - MER30 DNA MER1_type 0 230 1 1261 151 19 0 chr5 183477930 183478142 -19607390 + MER20 DNA MER1_type 1 216 -3 311 262 187 43 chr5 183478147 183478288 -19607244 + L1ME2 LINE L1 5651 5827 -294 1855 100 89 7 chr5 183478288 183478568 -19606964 + AluSc SINE Alu 1 303 -6 311 262 187 43 chr5 183478568 183478613 -19606919 + L1ME2 LINE L1 5827 5864 -257 337 233 0 0 chr5 183480231 183480304 -19605228 - MER3 DNA MER1_type -125 84 12 448 279 46 64 chr5 183480531 183480750 -19604782 + MIR SINE MIR 11 225 -37 381 296 129 41 chr5 183480986 183481280 -19604252 + HAL1 LINE L1 778 1097 -1410 24 32 0 0 chr5 183481872 183481903 -19603629 + AT_rich Low_complexity Low_complexity 1 31 0 410 334 113 26 chr5 183481913 183482443 -19603089 + L1 LINE L1 2250 2825 -3321 226 233 50 0 chr5 183482481 183482541 -19602991 + L1MC3 LINE L1 7051 7113 -672 332 229 0 14 chr5 183482541 183482611 -19602921 + MLT1F1 LTR MaLR 57 125 -442 1875 200 143 14 chr5 183482614 183483130 -19602402 + L1MC3 LINE L1 7196 7778 -7 24 0 0 0 chr5 183483130 183483154 -19602378 + AT_rich Low_complexity Low_complexity 1 24 0 734 239 18 49 chr5 183483154 183483428 -19602104 + L1ME2 LINE L1 5875 6142 -22 2015 160 0 0 chr5 183483440 183483740 -19601792 + AluSx SINE Alu 1 300 -12 260 360 119 38 chr5 183484255 183484650 -19600882 - L2 LINE L2 -2816 498 72 2045 112 7 0 chr5 183484749 183485086 -19600446 + AluSg SINE Alu 1 339 0 376 254 42 69 chr5 183485131 183485320 -19600212 + L1 LINE L1 3137 3320 -2826 1774 246 90 14 chr5 183485330 183485762 -19599770 - L1MC5 LINE L1 -27 7934 7427 207 0 0 0 chr5 183485762 183485785 -19599747 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1774 246 90 14 chr5 183485785 183486050 -19599482 - L1MC5 LINE L1 -534 7427 7184 24 0 0 0 chr5 183486054 183486078 -19599454 + AT_rich Low_complexity Low_complexity 1 24 0 330 307 87 20 chr5 183486286 183486540 -19598992 + L1P LINE L1 3566 3836 -2310 799 307 139 35 chr5 183486616 183487413 -19598119 + L1 LINE L1 4172 5051 -1095 395 335 50 17 chr5 183487804 183487983 -19597549 + MIR SINE MIR 34 218 -44 226 136 0 68 chr5 183488101 183488145 -19597387 - MIR SINE MIR -57 151 111 239 295 74 11 chr5 183489757 183489852 -19595680 - MIR SINE MIR -74 188 88 2225 92 0 0 chr5 183489985 183490268 -19595264 + AluSx SINE Alu 30 312 0 181 309 99 0 chr5 183490321 183490402 -19595130 - MIR SINE MIR -80 128 40 546 303 103 13 chr5 183490421 183490655 -19594877 + MIR SINE MIR 8 262 0 294 87 0 0 chr5 183490870 183490916 -19594616 + (TC)n Simple_repeat Simple_repeat 2 47 0 228 67 0 0 chr5 183490916 183490946 -19594586 + (CA)n Simple_repeat Simple_repeat 1 30 0 24 0 0 0 chr5 183491092 183491116 -19594416 + AT_rich Low_complexity Low_complexity 1 24 0 2594 195 74 25 chr5 183491373 183491979 -19593553 - LTR27 LTR ERV1 0 636 1 2582 102 3 2 chr5 183491988 183492649 -19592883 - MER41B LTR ERV1 -22 744 1 * 4765 140 47 6 chr5 183492649 183493438 -19592094 - MER4D LTR ERV1 -82 821 1 1448 174 8 0 chr5 183493752 183493993 -19591539 + MER57A LTR ERV1 3 245 -158 429 65 0 0 chr5 183493994 183494056 -19591476 + MER57B LTR ERV1 373 434 0 2559 136 64 11 chr5 183494300 183494740 -19590792 + LTR24 LTR ERV1 5 467 0 208 307 86 71 chr5 183494767 183494907 -19590625 - MIR3 SINE MIR -51 157 16 233 213 82 90 chr5 183494984 183495130 -19590402 - HsTC2 DNA Tc2 -34 1864 1 530 225 56 66 chr5 183495435 183495648 -19589884 - L2 LINE L2 -2 3311 3101 36 40 0 0 chr5 183496314 183496364 -19589168 + AT_rich Low_complexity Low_complexity 1 50 0 421 219 66 13 chr5 183496450 183496601 -19588931 + L1ME LINE L1 816 974 -5096 438 324 86 6 chr5 183496761 183497076 -19588456 - L1ME LINE L1 -302 5819 5480 22 0 0 0 chr5 183497210 183497232 -19588300 + AT_rich Low_complexity Low_complexity 1 22 0 289 302 62 45 chr5 183497884 183498063 -19587469 + L1ME LINE L1 295 476 -5594 1356 242 71 49 chr5 183498094 183498763 -19586769 + L1ME LINE L1 410 1095 -4981 1111 96 6 0 chr5 183498785 183498941 -19586591 + L1PA10 LINE L1 6009 6165 -3 307 323 14 42 chr5 183498945 183499230 -19586302 - L1ME4a LINE L1 -70 6051 5775 208 0 0 0 chr5 183499237 183499260 -19586272 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 781 107 18 0 chr5 183499260 183499372 -19586160 - AluSg/x SINE Alu -1 304 169 4697 25 0 5 chr5 183499444 183500017 -19585515 + L1PA3 LINE L1 5602 6155 0 302 0 26 0 chr5 183500037 183500075 -19585457 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2169 178 21 0 chr5 183500171 183500554 -19584978 + MSTB LTR MaLR 1 391 -35 188 292 0 0 chr5 183500595 183500643 -19584889 - L2 LINE L2 -4 3309 3262 2567 71 0 0 chr5 183501585 183501896 -19583636 + AluY SINE Alu 1 311 0 761 61 272 0 chr5 183501920 183502067 -19583465 - MER53 DNA DNA -2 187 1 346 299 67 15 chr5 183502171 183502305 -19583227 + L3 LINE CR1 1403 1543 -34 2116 52 59 14 chr5 183503193 183503479 -19582053 + AluY SINE Alu 1 299 -12 2100 126 3 3 chr5 183503610 183503911 -19581621 + AluJb SINE Alu 1 301 -11 29 0 0 0 chr5 183503911 183503940 -19581592 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr5 183503997 183504021 -19581511 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 976 307 60 19 chr5 183504024 183504454 -19581078 - L2 LINE L2 -27 3286 2839 183 387 24 65 chr5 183504474 183504642 -19580890 + L2 LINE L2 3103 3263 -9 611 336 28 8 chr5 183504726 183504976 -19580556 - MIR SINE MIR -1 261 7 303 320 0 0 chr5 183505783 183505861 -19579671 + L2 LINE L2 3194 3271 -1 261 0 0 0 chr5 183506075 183506089 -19579443 + (CA)n Simple_repeat Simple_repeat 1 43 0 261 0 0 0 chr5 183506089 183506118 -19579414 + (CA)n Simple_repeat Simple_repeat 2 30 0 2389 88 0 0 chr5 183506386 183506683 -19578849 + AluSx SINE Alu 15 311 -1 227 222 0 14 chr5 183506716 183506788 -19578744 + GA-rich Low_complexity Low_complexity 3 73 0 396 300 36 8 chr5 183507427 183507582 -19577950 - MLT1E1 LTR MaLR -263 391 201 196 346 51 0 chr5 183508034 183508112 -19577420 - MIR SINE MIR -108 154 73 2319 98 0 0 chr5 183508422 183508719 -19576813 + AluSg SINE Alu 1 297 -13 2396 121 0 5 chr5 183508997 183509024 -19576508 - L1PA14 LINE L1 -190 5971 5945 880 115 0 0 chr5 183509024 183509154 -19576378 - L1PA13 LINE L1 -2 6161 6032 2396 121 0 5 chr5 183509154 183509507 -19576025 - L1PA14 LINE L1 -216 5945 5593 215 274 16 0 chr5 183509621 183509683 -19575849 + (TAA)n Simple_repeat Simple_repeat 3 65 0 231 152 0 0 chr5 183510553 183510599 -19574933 + (TA)n Simple_repeat Simple_repeat 2 47 0 196 300 33 22 chr5 183511395 183511485 -19574047 + MIR SINE MIR 37 127 -81 562 341 61 55 chr5 183511673 183512099 -19573433 - L2 LINE L2 0 3272 2848 233 333 85 85 chr5 183514537 183514638 -19570894 - L2 LINE L2 -209 3063 2960 2503 65 0 13 chr5 183514638 183514945 -19570587 - AluY SINE Alu -8 303 1 233 333 85 85 chr5 183514945 183515032 -19570500 - L2 LINE L2 -311 2961 2875 1998 151 0 3 chr5 183515034 183515338 -19570194 - AluJb SINE Alu -9 303 1 2777 114 28 12 chr5 183515444 183515624 -19569908 + L1PB3 LINE L1 5219 5395 -759 2224 104 14 0 chr5 183515624 183515921 -19569611 + AluSx SINE Alu 3 303 -9 2777 114 28 12 chr5 183515921 183516242 -19569290 + L1PB3 LINE L1 5395 5728 -426 933 158 12 18 chr5 183516242 183516396 -19569136 + L1PB3 LINE L1 5985 6154 0 293 95 27 27 chr5 183516458 183516532 -19569000 + (TA)n Simple_repeat Simple_repeat 2 75 0 2236 115 7 0 chr5 183516548 183516843 -19568689 - AluSq SINE Alu -16 297 1 274 319 0 11 chr5 183517559 183517653 -19567879 - MLT1K LTR MaLR -494 94 2 598 271 26 82 chr5 183517771 183517890 -19567642 + MIR SINE MIR 8 132 -130 1460 203 23 8 chr5 183517890 183518156 -19567376 - AluJo SINE Alu -14 298 29 598 271 26 82 chr5 183518156 183518305 -19567227 + MIR SINE MIR 132 261 -1 1694 200 58 29 chr5 183520280 183520731 -19564801 - MLT1C LTR MaLR -2 465 2 22 0 0 0 chr5 183521628 183521650 -19563882 + AT_rich Low_complexity Low_complexity 1 22 0 2098 132 0 0 chr5 183521651 183521965 -19563567 + AluSq SINE Alu 1 314 0 514 211 124 72 chr5 183522696 183522854 -19562678 + MER20 DNA MER1_type 6 177 -42 1946 154 0 19 chr5 183522854 183523166 -19562366 + AluSx SINE Alu 3 308 -4 514 211 124 72 chr5 183523166 183523201 -19562331 + MER20 DNA MER1_type 177 209 -10 35 24 0 0 chr5 183523288 183523330 -19562202 + AT_rich Low_complexity Low_complexity 1 42 0 876 144 6 52 chr5 183523636 183523809 -19561723 + FRAM SINE Alu 1 40 0 193 29 59 0 chr5 183524002 183524036 -19561496 + (CAA)n Simple_repeat Simple_repeat 1 36 0 575 234 174 36 chr5 183525915 183526278 -19559254 - MER113 DNA MER1_type? -29 492 80 1282 225 63 14 chr5 183526333 183526502 -19559030 - AluJo SINE Alu -13 299 109 459 0 0 0 chr5 183526502 183526553 -19558979 + (TG)n Simple_repeat Simple_repeat 2 52 0 1282 225 63 14 chr5 183526553 183526668 -19558864 - AluJo SINE Alu -203 109 1 297 265 44 65 chr5 183526671 183526749 -19558783 + L1ME4a LINE L1 5641 5719 -402 3315 139 25 2 chr5 183526749 183527260 -19558272 - MER1A DNA MER1_type -4 523 1 297 265 44 65 chr5 183527260 183527563 -19557969 + L1ME4a LINE L1 5719 6013 -108 1155 251 69 52 chr5 183527747 183528242 -19557290 + HAL1 LINE L1 43 545 -1962 291 257 154 51 chr5 183528282 183528457 -19557075 + HAL1 LINE L1 764 956 -1551 226 246 0 16 chr5 183528532 183528593 -19556939 + A-rich Low_complexity Low_complexity 4 63 0 231 240 0 0 chr5 183528607 183528657 -19556875 + (TA)n Simple_repeat Simple_repeat 1 50 0 207 0 0 0 chr5 183528661 183528684 -19556848 + (TG)n Simple_repeat Simple_repeat 2 24 0 249 194 16 0 chr5 183528686 183528748 -19556784 + HAL1 LINE L1 1097 1159 -1348 862 281 70 27 chr5 183529823 183530268 -19555264 - HAL1 LINE L1 -2042 465 2 1733 140 30 124 chr5 183531041 183531628 -19553904 + MLT2A2 LTR ERVL 2 553 -1 4103 39 17 0 chr5 183531956 183532438 -19553094 - LTR2B LTR ERV1 0 490 1 23307 113 8 5 chr5 183532438 183535975 -19549557 - Harlequin LTR ERV1 0 6896 3352 6435 64 24 6 chr5 183535974 183536959 -19548573 - Harlequin LTR ERV1 -4322 2574 1572 * 4358 77 13 16 chr5 183536952 183537586 -19547946 - Harlequin LTR ERV1 -6003 893 262 * 2522 101 5 0 chr5 183537581 183537959 -19547573 - Harlequin LTR ERV1 -6516 380 1 * 3684 62 27 12 chr5 183537959 183538394 -19547138 - LTR2B LTR ERV1 0 490 46 2642 15 0 67 chr5 183538394 183538725 -19546807 + AluYb8 SINE Alu 1 309 -9 3684 62 27 12 chr5 183538725 183538772 -19546760 - LTR2B LTR ERV1 -444 46 1 2445 70 0 0 chr5 183539534 183539832 -19545700 + AluY SINE Alu 1 298 -13 286 258 13 58 chr5 183540049 183540204 -19545328 + HAL1 LINE L1 1350 1497 -1010 23 0 0 0 chr5 183540724 183540747 -19544785 + AT_rich Low_complexity Low_complexity 1 23 0 2620 42 0 3 chr5 183541317 183541629 -19543903 - AluY SINE Alu 0 311 1 411 297 119 5 chr5 183541948 183542133 -19543399 + MIR SINE MIR 1 206 -56 2086 149 0 3 chr5 183542333 183542642 -19542890 - AluSx SINE Alu -4 308 1 472 250 174 5 chr5 183542865 183543049 -19542483 - MIR SINE MIR -12 250 36 1951 81 89 19 chr5 183544189 183544502 -19541030 - AluSx SINE Alu 0 312 1 25 0 0 0 chr5 183544506 183544531 -19541001 + AT_rich Low_complexity Low_complexity 1 25 0 618 225 267 5 chr5 183544955 183545146 -19540386 - MIR SINE MIR -13 249 9 2485 161 47 64 chr5 183545150 183545678 -19539854 - MLT2B1 LTR ERVL 0 520 2 441 284 0 9 chr5 183545704 183545813 -19539719 + L2 LINE L2 3191 3298 -15 475 298 5 61 chr5 183546174 183546321 -19539211 + MER5A DNA MER1_type 1 136 -53 1753 189 0 22 chr5 183546321 183546634 -19538898 - AluJb SINE Alu -6 306 1 475 298 5 61 chr5 183546634 183546684 -19538848 + MER5A DNA MER1_type 136 187 -2 805 244 145 9 chr5 183547135 183547356 -19538176 + MIR SINE MIR 6 256 -6 510 46 0 0 chr5 183547887 183547952 -19537580 + (CA)n Simple_repeat Simple_repeat 2 66 0 1005 113 0 0 chr5 183547990 183548123 -19537409 + AluSq/x SINE Alu 1 133 -179 22 0 0 0 chr5 183548313 183548335 -19537197 + AT_rich Low_complexity Low_complexity 1 22 0 254 198 180 0 chr5 183548427 183548538 -19536994 + L1MC5 LINE L1 7750 7880 -81 3878 136 55 31 chr5 183549059 183549419 -19536113 - LTR8A LTR ERV1 0 727 377 2195 87 7 11 chr5 183549419 183549706 -19535826 + AluSq SINE Alu 15 300 -13 3878 136 55 31 chr5 183549706 183550050 -19535482 - LTR8A LTR ERV1 -350 377 6 3987 71 39 0 chr5 183550050 183550544 -19534988 - LTR10D LTR ERV1 0 513 1 229 321 71 21 chr5 183551034 183551174 -19534358 + MIR SINE MIR 20 166 -96 391 275 96 57 chr5 183551334 183551614 -19533918 + L2 LINE L2 1805 2095 -1219 2491 62 0 7 chr5 183552154 183552458 -19533074 - AluY SINE Alu -9 302 1 1050 329 37 42 chr5 183552501 183553097 -19532435 + L2 LINE L2 2104 2696 -618 1482 35 0 0 chr5 183553099 183553270 -19532262 - AluYb8 SINE Alu -2 316 146 2086 113 59 5 chr5 183553275 183553649 -19531883 + LTR7 LTR ERV1 1 450 0 15879 132 15 16 chr5 183553649 183556678 -19528854 + HERVH LTR ERV1 1 3338 -4375 5228 166 10 12 chr5 183556678 183557683 -19527849 + HERVH LTR ERV1 3825 4812 -2287 * 5810 126 22 1 chr5 183557682 183558572 -19526960 + HERVH LTR ERV1 5108 6016 -1697 3851 90 9 30 chr5 183558565 183559134 -19526398 + HERVH LTR ERV1 7157 7713 0 * 1820 109 67 6 chr5 183559134 183559476 -19526056 + LTR7 LTR ERV1 1 419 -31 868 158 89 7 chr5 183559484 183559630 -19525902 - AluSx SINE Alu -154 158 1 23 0 0 0 chr5 183559993 183560016 -19525516 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 183560135 183560171 -19525361 + AT_rich Low_complexity Low_complexity 1 36 0 390 272 99 86 chr5 183560466 183560709 -19524823 - MIR SINE MIR -5 257 12 306 279 13 0 chr5 183560996 183561075 -19524457 - MER81 DNA DNA 0 114 35 1888 162 0 16 chr5 183561914 183562217 -19523315 + AluJb SINE Alu 1 298 -14 1952 116 14 38 chr5 183562348 183562641 -19522891 + AluSx SINE Alu 1 286 -26 261 289 89 0 chr5 183562670 183562760 -19522772 + MIR3 SINE MIR 57 154 -54 243 230 0 54 chr5 183563057 183563131 -19522401 + MLT1K LTR MaLR 178 247 -341 2237 34 4 15 chr5 183563322 183563589 -19521943 - AluY SINE Alu -47 264 1 943 140 91 16 chr5 183563589 183563775 -19521757 - MSTA LTR MaLR -228 200 1 1599 225 113 39 chr5 183564149 183564616 -19520916 - MLT1D LTR MaLR -1 504 3 361 330 75 20 chr5 183564839 183565039 -19520493 + MIR SINE MIR 49 259 -3 198 103 0 0 chr5 183565042 183565071 -19520461 + (TAA)n Simple_repeat Simple_repeat 3 31 0 586 304 19 39 chr5 183565711 183565968 -19519564 + MIR SINE MIR 6 257 -5 192 125 0 0 chr5 183565969 183566001 -19519531 + (TAG)n Simple_repeat Simple_repeat 2 33 0 195 305 85 12 chr5 183566019 183566101 -19519431 - MIR3 SINE MIR -6 202 115 213 39 0 0 chr5 183566426 183566452 -19519080 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 389 212 40 71 chr5 183567260 183567359 -19518173 - MLT1I LTR MaLR -2 407 324 2448 70 3 3 chr5 183567367 183567668 -19517864 + AluY SINE Alu 1 301 -10 427 273 30 0 chr5 183567753 183567852 -19517680 + L2 LINE L2 3211 3312 -1 355 331 8 8 chr5 183569552 183569682 -19515850 + L2 LINE L2 2725 2854 -460 328 291 61 31 chr5 183569672 183569868 -19515664 + L2 LINE L2 3075 3276 -37 * 246 164 0 0 chr5 183570680 183570735 -19514797 + CT-rich Low_complexity Low_complexity 1 55 0 1097 176 0 90 chr5 183571067 183571323 -19514209 + L1MB8 LINE L1 5946 6178 0 1412 224 42 12 chr5 183571832 183572162 -19513370 + MER58B DNA MER1_type 1 340 -1 2078 111 4 0 chr5 183572352 183572674 -19512858 - AluSx SINE Alu 0 323 1 2717 187 78 78 chr5 183572802 183572967 -19512565 - LTR8A LTR ERV1 0 727 563 2320 91 0 7 chr5 183572967 183573265 -19512267 - AluSg1 SINE Alu -13 296 1 2717 187 78 78 chr5 183573265 183573826 -19511706 - LTR8A LTR ERV1 -163 564 1 1165 187 72 0 chr5 183573910 183574119 -19511413 - MER58A DNA MER1_type 0 224 1 1910 187 22 14 chr5 183574174 183574532 -19511000 + MLT1A1 LTR MaLR 5 365 0 4243 120 335 35 chr5 183574595 183575586 -19509946 + pTR5 LTR ERV1 741 2028 -410 366 168 14 46 chr5 183575589 183575689 -19509843 + LTR30 LTR ERV1 377 624 -94 1713 67 13 0 chr5 183575689 183575913 -19509619 + pTR5 LTR ERV1 177 403 -2035 2399 207 29 0 chr5 183576407 183576861 -19508671 + MLT1C LTR MaLR 1 467 0 3353 157 41 8 chr5 183576896 183577405 -19508127 + MER1A DNA MER1_type 2 527 0 225 354 0 0 chr5 183577494 183577559 -19507973 + L2 LINE L2 3207 3271 -1 2619 122 16 21 chr5 183577569 183577946 -19507586 + THE1C LTR MaLR 1 375 0 9854 111 37 51 chr5 183577946 183579544 -19505988 + THE1C-int LTR MaLR 1 1575 -5 2704 111 16 21 chr5 183579550 183579927 -19505605 + THE1C LTR MaLR 1 375 0 272 299 52 78 chr5 183580417 183580571 -19504961 + MER5B DNA MER1_type 1 150 -28 22 0 0 0 chr5 183580649 183580671 -19504861 + AT_rich Low_complexity Low_complexity 1 22 0 1694 181 0 0 chr5 183580675 183580956 -19504576 + AluJb SINE Alu 2 282 -30 216 0 0 0 chr5 183580960 183580984 -19504548 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 532 306 65 22 chr5 183581762 183581991 -19503541 - MIR SINE MIR -1 261 23 478 342 0 31 chr5 183582019 183582215 -19503317 + MIR3 SINE MIR 10 199 -9 2262 178 111 49 chr5 183583463 183584206 -19501326 + LTR27 LTR ERV1 3 827 -141 370 213 27 86 chr5 183584282 183584444 -19501088 + MER52A LTR ERV1 527 634 -2 2335 78 7 0 chr5 183585224 183585517 -19500015 + AluY SINE Alu 1 295 -16 305 335 84 34 chr5 183585646 183585909 -19499623 + L2 LINE L2 2702 2977 -337 505 197 94 44 chr5 183585976 183586179 -19499353 + HAL1 LINE L1 1981 2193 -314 1916 167 3 0 chr5 183586705 183587016 -19498516 + AluSx SINE Alu 1 312 0 2436 118 62 24 chr5 183587329 183587737 -19497795 + MSTB1 LTR MaLR 3 367 -8 560 242 0 17 chr5 183587755 183587875 -19497657 + MER33 DNA MER1_type 1 118 -206 386 177 0 0 chr5 183587858 183587920 -19497612 + MER33 DNA MER1_type 263 324 0 * 243 322 13 105 chr5 183587922 183588074 -19497458 + MIR3 SINE MIR 57 194 -14 428 330 88 5 chr5 183588225 183588440 -19497092 - MIR SINE MIR -27 235 3 769 249 34 43 chr5 183588929 183589348 -19496184 + L1MC5 LINE L1 6850 7176 -632 462 242 32 59 chr5 183589444 183589630 -19495902 + L1MC5 LINE L1 7293 7473 -488 550 270 23 11 chr5 183589658 183589832 -19495700 + L1M3b LINE L1 33 208 -6105 2555 283 50 38 chr5 183590116 183591896 -19493636 + L1M3b LINE L1 778 2536 -3848 4450 85 75 39 chr5 183591896 183592533 -19492999 - PABL_A LTR ERV1 0 660 1 2555 283 50 38 chr5 183592533 183592597 -19492935 + L1M3b LINE L1 2536 2326 -4058 3195 137 16 68 chr5 183592597 183593210 -19492322 + L1MA7 LINE L1 5708 6288 -3 2555 283 50 38 chr5 183593210 183593245 -19492287 + L1M3b LINE L1 2325 2358 -4026 383 224 60 68 chr5 183593216 183593466 -19492066 + L1MC5 LINE L1 7698 7945 -252 * 255 252 30 30 chr5 183593662 183593797 -19491735 + L1MC5 LINE L1 7794 7928 -33 335 282 113 0 chr5 183593801 183593943 -19491589 - MARNA DNA Mariner -266 320 163 2272 106 52 70 chr5 183594671 183595040 -19490492 + THE1B LTR MaLR 3 364 0 22 70 0 0 chr5 183597558 183597601 -19487931 + AT_rich Low_complexity Low_complexity 1 43 0 267 130 39 0 chr5 183597604 183597681 -19487851 + (TA)n Simple_repeat Simple_repeat 1 80 0 21 71 0 0 chr5 183597681 183597723 -19487809 + AT_rich Low_complexity Low_complexity 1 42 0 216 326 21 42 chr5 183597796 183597891 -19487641 - MIR SINE MIR -55 153 61 1483 126 28 0 chr5 183598121 183598336 -19487196 + L1PA10 LINE L1 5944 6164 -4 245 39 58 19 chr5 183598431 183598483 -19487049 + (CA)n Simple_repeat Simple_repeat 2 55 0 2082 118 0 0 chr5 183599125 183599405 -19486127 + AluSx SINE Alu 1 280 -32 7969 30 2 10 chr5 183599407 183600503 -19485029 + L1PA4 LINE L1 5064 6152 -3 484 271 91 50 chr5 183600562 183600783 -19484749 + MIR SINE MIR 33 262 0 669 169 60 33 chr5 183601064 183601247 -19484285 + MER53 DNA DNA 2 189 0 427 143 129 100 chr5 183601545 183601685 -19483847 + HAL1 LINE L1 1 144 -2363 664 269 68 5 chr5 183601685 183601904 -19483628 + MLT1H1 LTR MaLR 312 544 -11 2412 102 0 3 chr5 183602048 183602361 -19483171 + AluSq SINE Alu 1 312 -1 2113 141 0 3 chr5 183602377 183602681 -19482851 + AluSx SINE Alu 2 304 -8 931 119 6 6 chr5 183602681 183602840 -19482692 + (GGAA)n Simple_repeat Simple_repeat 3 161 0 1952 158 7 3 chr5 183603121 183603424 -19482108 + AluJo SINE Alu 1 304 -8 1967 206 59 2 chr5 183604144 183604586 -19480946 + MLT1C LTR MaLR 1 467 0 217 297 27 40 chr5 183605976 183606050 -19479482 - MIR3 SINE MIR -53 155 83 619 189 16 0 chr5 183606230 183606352 -19479180 + FLAM_A SINE Alu 1 124 -9 394 116 3 19 chr5 183606652 183606724 -19478808 - MLT1C LTR MaLR -43 424 313 2682 93 0 34 chr5 183606827 183607214 -19478318 - THE1C LTR MaLR 0 375 2 2647 117 20 23 chr5 183607215 183607680 -19477852 - THE1C-int LTR MaLR 0 1580 864 * 5556 164 19 3 chr5 183607669 183608998 -19476534 - L1MA4 LINE L1 -2 6298 4944 1188 194 4 4 chr5 183609068 183609087 -19476445 - L1MA4 LINE L1 -1166 4980 4962 1106 115 0 11 chr5 183609087 183609261 -19476271 - L1PA13 LINE L1 -7 6156 5985 1188 194 4 4 chr5 183609261 183609483 -19476049 - L1MA4 LINE L1 -1183 4963 4739 5558 70 4 0 chr5 183609700 183610414 -19475118 - L1PA7 LINE L1 -2 6152 5436 3480 82 24 2 chr5 183610415 183610976 -19474556 + L1P LINE L1 4857 5428 -726 1256 160 38 76 chr5 183610973 183611366 -19474166 - L1MA4 LINE L1 -1449 4697 4320 * 997 218 3 27 chr5 183611367 183611708 -19473824 + L1 LINE L1 4329 4647 -1499 2038 219 22 11 chr5 183612014 183612083 -19473449 + L1PA16 LINE L1 4630 4697 -1449 348 64 0 0 chr5 183612083 183612130 -19473402 + (CA)n Simple_repeat Simple_repeat 2 48 0 2038 219 22 11 chr5 183612130 183612593 -19472939 + L1PA16 LINE L1 4697 5168 -978 * 4367 158 14 1 chr5 183612592 183613967 -19471565 + L1PB1 LINE L1 4401 5793 -358 324 0 0 0 chr5 183613967 183614003 -19471529 + (CA)n Simple_repeat Simple_repeat 2 37 0 4367 158 14 1 chr5 183614003 183614078 -19471454 + L1PB1 LINE L1 5793 5866 -285 335 37 37 0 chr5 183614178 183614232 -19471300 + L1PB1 LINE L1 6096 6151 0 4930 152 16 3 chr5 183614232 183615221 -19470311 + L1PA16 LINE L1 5159 6157 -9 1171 123 3 130 chr5 183615289 183615397 -19470135 - L1 LINE L1 -1818 4328 4208 2119 139 0 0 chr5 183615397 183615707 -19469825 - AluSg SINE Alu 0 310 1 1171 123 3 130 chr5 183615707 183615891 -19469641 - L1 LINE L1 -1938 4208 4073 1583 167 104 31 chr5 183617325 183617708 -19467824 + L1MA7 LINE L1 5881 6291 0 2102 131 0 28 chr5 183617710 183618052 -19467480 + AluSx SINE Alu 1 312 0 415 285 27 113 chr5 183618233 183618448 -19467084 + MIR SINE MIR 20 208 -54 1921 163 0 3 chr5 183618448 183618749 -19466783 + AluJb SINE Alu 1 300 -12 415 285 27 113 chr5 183618749 183618794 -19466738 + MIR SINE MIR 208 255 -7 261 289 67 11 chr5 183619189 183619279 -19466253 - MIR SINE MIR -56 152 58 2090 134 3 7 chr5 183619446 183619745 -19465787 + AluSx SINE Alu 1 298 -14 517 367 68 25 chr5 183619947 183620342 -19465190 + L2 LINE L2 2859 3270 -2 188 67 33 0 chr5 183621583 183621613 -19463919 + (TAAAG)n Simple_repeat Simple_repeat 2 32 0 862 281 46 13 chr5 183622303 183622541 -19462991 - MIR SINE MIR -2 260 15 185 91 0 30 chr5 183623232 183623265 -19462267 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 225 154 0 0 chr5 183623267 183623306 -19462226 + (CA)n Simple_repeat Simple_repeat 2 40 0 251 159 23 0 chr5 183623399 183623443 -19462089 - L2 LINE L2 -9 3263 3219 442 316 75 11 chr5 183623529 183623716 -19461816 - MIR SINE MIR 0 262 64 344 220 262 7 chr5 183623753 183623894 -19461638 - MIR SINE MIR -16 246 70 2169 93 13 26 chr5 183623925 183624237 -19461295 - AluSg SINE Alu -2 308 1 201 420 0 9 chr5 183624647 183624759 -19460773 + L2 LINE L2 3200 3310 -3 339 208 28 0 chr5 183624799 183624871 -19460661 + MER96B DNA MER1_type? 1 74 -343 * 394 246 0 36 chr5 183624868 183624978 -19460554 + MER96B DNA MER1_type? 194 299 -118 479 319 27 16 chr5 183625016 183625204 -19460328 + MIR SINE MIR 67 256 -6 1642 128 0 8 chr5 183625348 183625582 -19459950 + AluSx SINE Alu 53 284 -28 297 0 0 0 chr5 183625582 183625615 -19459917 + (CA)n Simple_repeat Simple_repeat 2 34 0 180 204 0 61 chr5 183625794 183625843 -19459689 + MER5A DNA MER1_type 54 99 -90 2134 105 3 16 chr5 183626319 183626623 -19458909 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr5 183626712 183626734 -19458798 + AT_rich Low_complexity Low_complexity 1 22 0 500 254 36 7 chr5 183626869 183627007 -19458525 + MIR SINE MIR 70 211 -51 446 234 162 66 chr5 183627700 183627827 -19457705 - MER5A DNA MER1_type 0 189 41 3004 126 86 20 chr5 183627827 183628383 -19457149 + LTR49 LTR ERV1 1 593 -2 446 234 162 66 chr5 183628383 183628422 -19457110 - MER5A DNA MER1_type -148 41 7 1481 121 94 7 chr5 183628506 183628804 -19456728 + LTR56 LTR ERV1 1 324 -121 2219 114 3 0 chr5 183628814 183629122 -19456410 + AluSx SINE Alu 1 309 -3 338 348 63 56 chr5 183629201 183629471 -19456061 + L2 LINE L2 3000 3271 -1 557 252 65 61 chr5 183629885 183630163 -19455369 + MLT1C LTR MaLR 1 279 -188 2143 112 10 0 chr5 183630378 183630672 -19454860 - AluSq SINE Alu -16 297 1 21 36 0 0 chr5 183632133 183632161 -19453371 + AT_rich Low_complexity Low_complexity 1 28 0 245 250 38 62 chr5 183632259 183632419 -19453113 + HAL1 LINE L1 57 212 -2295 182 88 0 29 chr5 183632798 183632832 -19452700 + (GGAA)n Simple_repeat Simple_repeat 2 34 0 450 294 30 25 chr5 183632914 183633111 -19452421 + HAL1 LINE L1 342 539 -1968 642 208 116 12 chr5 183633330 183633503 -19452029 - MER20 DNA MER1_type -12 207 17 246 238 125 56 chr5 183633516 183633676 -19451856 + HAL1 LINE L1 745 915 -1592 2111 127 0 3 chr5 183633825 183634117 -19451415 + AluSx SINE Alu 11 301 -11 1251 186 47 66 chr5 183635609 183635867 -19449665 - AluJo SINE Alu -29 283 31 218 356 0 0 chr5 183636187 183636260 -19449272 + MIR3 SINE MIR 116 188 -20 2080 103 0 68 chr5 183636882 183637203 -19448329 - AluSc SINE Alu -10 299 1 7864 81 5 15 chr5 183637288 183638370 -19447162 + MER11C LTR ERVK 1 1071 0 1367 106 0 5 chr5 183638711 183638899 -19446633 + AluSc SINE Alu 103 289 -20 2319 113 0 0 chr5 183639594 183639903 -19445629 + AluY SINE Alu 3 311 0 895 264 87 92 chr5 183640100 183640665 -19444867 + MLT1G1 LTR MaLR 1 562 -33 216 0 0 0 chr5 183641291 183641315 -19444217 + (CA)n Simple_repeat Simple_repeat 2 25 0 7211 195 23 65 chr5 183641598 183641804 -19443728 + L1PB1 LINE L1 2476 2689 -3462 625 207 17 0 chr5 183641804 183641967 -19443565 - FLAM_C SINE Alu 0 165 1 7211 195 23 65 chr5 183641967 183642480 -19443052 + L1PB1 LINE L1 2689 3222 -2929 2112 124 7 3 chr5 183642480 183642778 -19442754 + AluSx SINE Alu 1 299 -13 7211 195 23 65 chr5 183642778 183643445 -19442087 + L1PB1 LINE L1 3222 3916 -2235 2516 188 8 88 chr5 183643445 183644045 -19441487 + MLT2B3 LTR ERVL 3 554 0 7211 195 23 65 chr5 183644045 183644065 -19441467 + L1PB1 LINE L1 3916 3935 -2216 1717 120 136 0 chr5 183644065 183644339 -19441193 + AluSx SINE Alu 1 308 0 7211 195 23 65 chr5 183644339 183644425 -19441107 + L1PB1 LINE L1 3935 4023 -2128 2038 147 0 3 chr5 183644425 183644754 -19440778 + AluSx SINE Alu 1 312 0 7211 195 23 65 chr5 183644754 183647097 -19438435 + L1PB1 LINE L1 4023 6150 -1 305 143 95 0 chr5 183647224 183647308 -19438224 + L1MA9 LINE L1 5963 6054 -258 24 0 0 0 chr5 183647457 183647481 -19438051 + AT_rich Low_complexity Low_complexity 1 24 0 1839 145 24 24 chr5 183647700 183647989 -19437543 + AluJo SINE Alu 2 290 -22 590 62 97 0 chr5 183647989 183648248 -19437284 + (TA)n Simple_repeat Simple_repeat 1 284 0 235 274 63 42 chr5 183648457 183648552 -19436980 + MIR SINE MIR 35 131 -77 1093 180 81 7 chr5 183648577 183648907 -19436625 + MLT1B LTR MaLR 1 390 0 318 167 198 0 chr5 183649316 183649412 -19436120 - MIR SINE MIR 0 262 148 285 360 58 17 chr5 183650196 183650368 -19435164 + L2 LINE L2 1645 1823 -1491 272 289 252 9 chr5 183650372 183650694 -19434838 + L2 LINE L2 1942 2341 -973 303 350 54 44 chr5 183650777 183651238 -19434294 + L2 LINE L2 2583 3048 -224 492 32 0 0 chr5 183651768 183651830 -19433702 + (TG)n Simple_repeat Simple_repeat 2 63 0 262 346 80 12 chr5 183653971 183654133 -19431399 - MIR SINE MIR -71 191 19 2363 85 0 0 chr5 183654256 183654550 -19430982 - AluSx SINE Alu -18 294 1 189 306 45 72 chr5 183655394 183655505 -19430027 - MIR3 SINE MIR -23 185 78 281 268 102 55 chr5 183656730 183656857 -19428675 - MIR SINE MIR -16 246 114 382 233 166 12 chr5 183656868 183657031 -19428501 - MIR SINE MIR -9 253 66 2416 71 0 0 chr5 183657170 183657465 -19428067 + AluSc SINE Alu 3 297 -12 21 0 0 0 chr5 183660767 183660788 -19424744 + AT_rich Low_complexity Low_complexity 1 21 0 2447 58 0 10 chr5 183661452 183661760 -19423772 + AluY SINE Alu 1 305 -6 1687 171 3 33 chr5 183663751 183664056 -19421476 - AluJb SINE Alu -16 296 1 503 209 104 8 chr5 183664649 183664783 -19420749 - MIR SINE MIR -112 150 4 1972 123 32 3 chr5 183665031 183665315 -19420217 + AluSx SINE Alu 1 292 -20 605 261 37 57 chr5 183665322 183665484 -19420048 + L1M4 LINE L1 2332 2496 -3650 1451 217 25 0 chr5 183665484 183665760 -19419772 + AluJo SINE Alu 17 299 -13 605 261 37 57 chr5 183665760 183665946 -19419586 + L1M4 LINE L1 2496 2673 -3473 4559 211 154 87 chr5 183666049 183666560 -19418972 + L1MB7 LINE L1 2506 2981 -3203 858 178 30 12 chr5 183666560 183666729 -19418803 + AluJo SINE Alu 122 293 -19 4559 211 154 87 chr5 183666729 183668533 -19416999 + L1MB7 LINE L1 2981 4663 -1521 1729 156 13 32 chr5 183668533 183668841 -19416691 + AluSx SINE Alu 1 302 -10 4559 211 154 87 chr5 183668841 183670332 -19415200 + L1MB7 LINE L1 4663 5137 -1047 2286 88 3 0 chr5 183670332 183670626 -19414906 + AluSp SINE Alu 1 295 -18 4559 211 154 87 chr5 183670626 183671707 -19413825 + L1MB7 LINE L1 5137 6144 -40 318 328 57 28 chr5 183672670 183672847 -19412685 + L1MC4a LINE L1 5338 5519 -643 2307 100 3 0 chr5 183672890 183673201 -19412331 - AluSp SINE Alu -1 312 1 424 235 10 0 chr5 183673202 183673300 -19412232 - MIR SINE MIR -4 258 160 1826 281 125 29 chr5 183673333 183673483 -19412049 - L2 LINE L2 -1 3312 3178 733 229 167 0 chr5 183673483 183673675 -19411857 - MER58A DNA MER1_type 0 224 1 1826 281 125 29 chr5 183673675 183674042 -19411490 - L2 LINE L2 -135 3178 2848 1850 90 0 8 chr5 183674042 183674297 -19411235 + AluY SINE Alu 1 253 -58 1826 281 125 29 chr5 183674297 183674777 -19410755 - L2 LINE L2 -465 2848 2214 387 329 47 12 chr5 183674796 183675115 -19410417 + L1MC4a LINE L1 5618 5947 -1861 24 67 0 0 chr5 183675416 183675461 -19410071 + AT_rich Low_complexity Low_complexity 1 45 0 1543 102 19 0 chr5 183675701 183675916 -19409616 - AluSg/x SINE Alu -15 295 77 2364 74 20 0 chr5 183676542 183676841 -19408691 - AluSg SINE Alu -4 306 2 28 29 0 0 chr5 183676968 183677003 -19408529 + AT_rich Low_complexity Low_complexity 1 35 0 560 225 63 0 chr5 183677012 183677154 -19408378 + FRAM SINE Alu 2 152 -24 436 319 38 27 chr5 183677520 183677705 -19407827 - MIR SINE MIR -2 260 74 376 300 92 0 chr5 183679433 183679553 -19405979 - L2 LINE L2 -14 3299 3169 449 251 174 24 chr5 183679800 183680007 -19405525 - MIR SINE MIR -16 246 9 2133 56 49 11 chr5 183680073 183680359 -19405173 + AluY SINE Alu 1 297 -14 399 257 166 10 chr5 183680388 183680530 -19405002 - MIR SINE MIR -62 146 34 382 123 0 0 chr5 183680886 183680943 -19404589 + Alu SINE Alu 246 302 0 308 232 152 18 chr5 183680988 183681100 -19404432 + MER112 DNA MER1_type 74 200 -60 2266 102 0 3 chr5 183681105 183681410 -19404122 + AluSx SINE Alu 1 304 -8 483 271 159 0 chr5 183681742 183681893 -19403639 + MIR SINE MIR 82 256 -6 1758 164 20 0 chr5 183682891 183683195 -19402337 + AluSx SINE Alu 1 310 -2 1862 143 0 30 chr5 183683899 183684200 -19401332 - AluSx SINE Alu -20 292 1 2029 107 3 27 chr5 183684231 183684531 -19401001 + AluSx SINE Alu 5 297 -15 2168 107 3 16 chr5 183684534 183684843 -19400689 + AluSx SINE Alu 1 305 -7 566 185 42 0 chr5 183684954 183685073 -19400459 + Charlie5 DNA MER1_type 1 124 -2488 1352 171 111 3 chr5 183685073 183685423 -19400109 + Charlie5 DNA MER1_type 2236 2623 0 782 200 189 0 chr5 183686773 183686948 -19398584 - MER3 DNA MER1_type 0 209 2 302 290 21 0 chr5 183687326 183687419 -19398113 - HAL1 LINE L1 -910 1597 1503 2357 79 0 23 chr5 183687635 183687940 -19397592 + AluY SINE Alu 1 298 -13 2141 102 3 0 chr5 183688437 183688743 -19396789 + AluSp SINE Alu 1 307 0 1678 137 27 101 chr5 183688891 183689219 -19396313 + AluSx SINE Alu 1 304 -8 1745 171 0 23 chr5 183689263 183689567 -19395965 + AluJo SINE Alu 6 302 -10 2282 210 69 74 chr5 183690352 183690602 -19394930 - L1ME2 LINE L1 -10 6154 5904 649 219 31 0 chr5 183690602 183690730 -19394802 - FLAM_C SINE Alu -1 132 1 2282 210 69 74 chr5 183690730 183691335 -19394197 - L1ME2 LINE L1 -260 5904 5303 220 244 0 0 chr5 183691598 183691643 -19393889 + MIR SINE MIR 6 50 -212 299 265 8 68 chr5 183692824 183692956 -19392576 + L1ME LINE L1 5597 5720 -401 270 310 150 15 chr5 183693101 183693357 -19392175 + L1MC/D LINE L1 5259 5544 -622 26 0 0 0 chr5 183693741 183693767 -19391765 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr5 183694328 183694367 -19391165 + AT_rich Low_complexity Low_complexity 1 39 0 1726 193 0 13 chr5 183694582 183694882 -19390650 + AluJo SINE Alu 1 296 -16 834 206 0 13 chr5 183695044 183695199 -19390333 + FAM SINE Alu 5 157 -18 2149 107 0 10 chr5 183695299 183695598 -19389934 + AluSg SINE Alu 1 296 -14 382 331 54 20 chr5 183696204 183696352 -19389180 + MIR3 SINE MIR 39 191 -17 276 347 20 10 chr5 183697436 183697534 -19387998 + L2 LINE L2 1189 1287 -2027 328 229 0 0 chr5 183697594 183697655 -19387877 + FLAM_A SINE Alu 1 61 -71 1635 158 50 17 chr5 183697940 183698237 -19387295 + AluJo SINE Alu 1 307 -5 748 272 154 21 chr5 183698831 183699306 -19386226 - L1ME3A LINE L1 -220 5950 5413 565 289 129 11 chr5 183699313 183699694 -19385838 - L1ME3A LINE L1 -798 5348 4923 209 231 46 9 chr5 183699770 183699878 -19385654 + (TA)n Simple_repeat Simple_repeat 2 113 0 829 356 56 22 chr5 183699939 183700436 -19385096 + L2 LINE L2 2181 2694 -620 2277 103 0 3 chr5 183700458 183700769 -19384763 - AluSq SINE Alu -3 310 1 2535 173 21 50 chr5 183703134 183703754 -19381778 - L1MB8 LINE L1 0 6989 6388 305 73 0 0 chr5 183703758 183703799 -19381733 - 5S rRNA rRNA -79 42 2 7061 196 57 35 chr5 183703802 183705349 -19380183 - L1MB8 LINE L1 -600 6395 4780 1809 126 61 0 chr5 183705349 183705626 -19379906 + AluSq SINE Alu 1 294 -19 7061 196 57 35 chr5 183705626 183706353 -19379179 - L1MB8 LINE L1 -2215 4780 4071 2004 137 10 13 chr5 183706393 183706706 -19378826 - AluJb SINE Alu 0 312 1 837 148 7 26 chr5 183706714 183706869 -19378663 - L1PA16 LINE L1 0 6166 6015 3615 263 77 45 chr5 183706882 183707515 -19378017 - L1MB8 LINE L1 -5380 1479 867 2025 127 0 74 chr5 183707515 183707878 -19377654 - MER1B DNA MER1_type -1 336 1 3615 263 77 45 chr5 183707878 183708668 -19376864 - L1MB8 LINE L1 -5992 867 11 291 328 41 33 chr5 183710254 183710376 -19375156 + MER5A DNA MER1_type 66 188 -1 659 158 126 0 chr5 183710857 183710984 -19374548 + FLAM_C SINE Alu 1 143 0 18046 172 71 12 chr5 183711019 183713426 -19372106 - ERVL-B1 LTR ERVL -1924 3840 1576 2354 12 0 0 chr5 183713426 183713684 -19371848 - AluYb8 SINE Alu -8 310 53 18046 172 71 12 chr5 183713684 183714631 -19370901 - ERVL-B1 LTR ERVL -4188 1576 255 3922 113 12 12 chr5 183714631 183715233 -19370299 + LTR43 LTR ERV1 1 602 0 18046 172 71 12 chr5 183715233 183715503 -19370029 - ERVL-B1 LTR ERVL -5509 255 2 1025 224 114 29 chr5 183715504 183715932 -19369600 - MLT2B1 LTR ERVL 0 520 1 218 307 23 45 chr5 183716697 183716785 -19368747 - L2 LINE L2 0 3272 3187 312 299 34 26 chr5 183716997 183717114 -19368418 - L2 LINE L2 -554 2760 2643 * 358 291 74 59 chr5 183717103 183717194 -19368338 + L2 LINE L2 2766 2854 -460 213 39 0 0 chr5 183717194 183717220 -19368312 + (TTCTCC)n Simple_repeat Simple_repeat 5 30 0 1747 161 0 31 chr5 183717219 183717533 -19367999 - AluJb SINE Alu 0 305 1 358 291 74 59 chr5 183717533 183717643 -19367889 + L2 LINE L2 3167 2971 -343 25 0 0 0 chr5 183717857 183717882 -19367650 + AT_rich Low_complexity Low_complexity 1 25 0 1345 193 79 31 chr5 183718522 183718847 -19366685 - L1ME2 LINE L1 -202 5962 5616 2121 92 3 11 chr5 183718847 183719171 -19366361 - AluSg SINE Alu 0 322 1 1345 193 79 31 chr5 183719171 183719197 -19366335 - L1ME2 LINE L1 -548 5616 5593 406 200 70 0 chr5 183719250 183719350 -19366182 - L1ME2 LINE L1 -555 5609 5503 1270 182 72 1 chr5 183719354 183719824 -19365708 + MER34 LTR ERV1 1 542 0 587 176 99 0 chr5 183719828 183719970 -19365562 - L1ME2 LINE L1 -664 5498 5343 2252 106 0 0 chr5 183719978 183720270 -19365262 + AluSx SINE Alu 3 294 -18 2722 13 0 0 chr5 183720274 183720602 -19364930 + AluYb8 SINE Alu 1 328 0 667 114 99 8 chr5 183720613 183720744 -19364788 + LTR32 LTR ERVL 15 157 -314 747 168 0 7 chr5 183720745 183720882 -19364650 + FRAM SINE Alu 32 167 -9 527 59 0 0 chr5 183720882 183720950 -19364582 - MER101 LTR ERV1 -406 68 1 186 232 74 74 chr5 183721154 183721249 -19364283 - MER5A DNA MER1_type -16 173 79 189 0 0 0 chr5 183721619 183721640 -19363892 + (TTTTTG)n Simple_repeat Simple_repeat 5 25 0 200 346 51 0 chr5 183723473 183723551 -19361981 - MER5A DNA MER1_type -62 127 46 410 272 160 14 chr5 183724724 183724937 -19360595 - MIR SINE MIR -9 253 10 333 246 127 32 chr5 183726468 183726594 -19358938 - MIR3 SINE MIR -6 202 65 1915 138 30 0 chr5 183726792 183727088 -19358444 - AluSx SINE Alu -7 305 1 1021 96 0 19 chr5 183727153 183727309 -19358223 - AluSg/x SINE Alu 0 312 160 597 182 240 13 chr5 183727966 183728120 -19357412 + MER5A DNA MER1_type 1 189 0 2246 96 3 10 chr5 183728945 183729248 -19356284 - AluSq SINE Alu -12 301 1 21 36 0 0 chr5 183729798 183729826 -19355706 + AT_rich Low_complexity Low_complexity 1 28 0 1687 137 13 65 chr5 183729826 183730133 -19355399 - AluJb SINE Alu -20 292 2 34 42 0 0 chr5 183730226 183730274 -19355258 + AT_rich Low_complexity Low_complexity 1 48 0 592 183 24 24 chr5 183730277 183730403 -19355129 - FLAM_C SINE Alu -7 126 1 235 250 186 32 chr5 183730974 183731098 -19354434 - MIR SINE MIR -14 248 106 1995 138 3 3 chr5 183731234 183731532 -19354000 - AluSx SINE Alu -14 298 1 1482 207 3 17 chr5 183731546 183731836 -19353696 - AluJo SINE Alu -21 291 6 246 151 70 12 chr5 183732858 183732944 -19352588 + (TATG)n Simple_repeat Simple_repeat 2 92 0 1225 172 100 54 chr5 183733408 183733757 -19351775 - MLT1A1 LTR MaLR 0 365 1 562 272 116 23 chr5 183733872 183734218 -19351314 - L1MC4 LINE L1 -35 8007 7630 1399 143 174 8 chr5 183734328 183734587 -19350945 - AluJb SINE Alu 0 302 1 1923 147 3 33 chr5 183734595 183734901 -19350631 - AluJo SINE Alu -15 297 1 272 95 0 24 chr5 183735560 183735602 -19349930 + Alu SINE Alu 1 41 -262 758 171 0 0 chr5 183736522 183736639 -19348893 + FLAM_C SINE Alu 1 117 -16 21 36 0 0 chr5 183736640 183736668 -19348864 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 183738738 183738762 -19346770 + AT_rich Low_complexity Low_complexity 1 24 0 1502 144 58 46 chr5 183739181 183739455 -19346077 - Tigger2 DNA MER2_type 0 2718 2438 2064 141 0 0 chr5 183739455 183739754 -19345778 - AluSx SINE Alu -13 299 1 1502 144 58 46 chr5 183739754 183739805 -19345727 - Tigger2 DNA MER2_type -280 2438 2389 344 259 95 18 chr5 183739805 183739952 -19345580 - MER5B DNA MER1_type -30 148 2 2300 103 3 0 chr5 183740243 183740545 -19344987 - AluSc SINE Alu -6 303 1 510 173 29 10 chr5 183740681 183740785 -19344747 - AluSq/x SINE Alu -207 106 1 3157 123 0 8 chr5 183740785 183741298 -19344234 - L1P LINE L1 -1141 5005 4497 317 308 17 8 chr5 183741495 183741615 -19343917 + MARNA DNA Mariner 449 569 -17 2919 140 16 0 chr5 183741809 183742308 -19343224 - L1MB1 LINE L1 -1 6167 5661 2287 31 34 0 chr5 183742408 183742699 -19342833 - LTR17 LTR ERV1 -479 301 1 1027 60 0 0 chr5 183742699 183742833 -19342699 - HERV17 LTR ERV1 0 8626 8493 482 305 81 31 chr5 183743085 183743308 -19342224 - MIR SINE MIR -27 235 2 305 298 0 92 chr5 183743323 183743464 -19342068 + MIR SINE MIR 21 148 -114 497 186 274 0 chr5 183743546 183743670 -19341862 + AluJo SINE Alu 1 158 -154 303 355 0 0 chr5 183744844 183744937 -19340595 - L1MC4a LINE L1 -1895 5913 5821 4156 82 10 15 chr5 183744937 183745525 -19340007 - L1PA10 LINE L1 -13 6155 5571 989 221 126 36 chr5 183745653 183746065 -19339467 - L1MC4 LINE L1 -36 8006 7558 334 252 75 82 chr5 183746075 183746190 -19339342 - L1MC4 LINE L1 -1426 6616 6502 1804 157 46 0 chr5 183746190 183746470 -19339062 - AluJb SINE Alu -19 293 1 2358 81 0 23 chr5 183746474 183746783 -19338749 - AluY SINE Alu -9 302 1 334 252 75 82 chr5 183746783 183746821 -19338711 - L1MC4 LINE L1 -1543 6499 6459 2186 130 34 3 chr5 183747111 183747465 -19338067 + MER47A DNA MER2_type 2 366 0 203 344 139 16 chr5 183747642 183747764 -19337768 + MIR SINE MIR 48 184 -78 2845 7 0 0 chr5 183748700 183749010 -19336522 - AluY SINE Alu -1 310 1 21 0 0 0 chr5 183749118 183749139 -19336393 + AT_rich Low_complexity Low_complexity 1 21 0 891 211 6 6 chr5 183749443 183749614 -19335918 - FAM SINE Alu -4 171 1 1128 185 52 45 chr5 183749618 183749818 -19335714 - MLT2D LTR ERVL -119 345 141 2601 91 39 0 chr5 183749818 183750179 -19335353 - THE1C LTR MaLR 0 375 1 1128 185 52 45 chr5 183750179 183750317 -19335215 - MLT2D LTR ERVL -323 141 5 3025 128 42 26 chr5 183750377 183750973 -19334559 - L1MB2 LINE L1 -7 6164 5445 2110 113 27 7 chr5 183750973 183751288 -19334244 - AluSx SINE Alu 0 312 1 447 230 58 0 chr5 183751899 183752038 -19333494 - HAL1 LINE L1 -687 1820 1674 1262 254 173 40 chr5 183752070 183752424 -19333108 - HAL1 LINE L1 -906 1601 1295 1676 176 181 25 chr5 183752424 183752861 -19332671 + MLT1D LTR MaLR 1 505 0 1262 254 173 40 chr5 183752861 183752938 -19332594 - HAL1 LINE L1 -1212 1295 1230 2281 96 0 0 chr5 183752938 183753231 -19332301 - AluSg SINE Alu -17 293 1 1262 254 173 40 chr5 183753231 183753700 -19331832 - HAL1 LINE L1 -1277 1230 580 2333 102 0 0 chr5 183753744 183754037 -19331495 - AluSx SINE Alu -16 296 4 1663 167 10 24 chr5 183754456 183754750 -19330782 + AluJb SINE Alu 3 292 -20 1078 247 203 13 chr5 183754782 183755171 -19330361 - HAL1 LINE L1 -2032 475 13 1329 248 99 105 chr5 183755944 183756570 -19328962 - MLT1E2 LTR MaLR 0 626 5 659 245 48 48 chr5 183757087 183757130 -19328402 + L1MC4a LINE L1 7558 7600 -208 2097 151 0 0 chr5 183757130 183757441 -19328091 + AluJb SINE Alu 1 311 -1 659 245 48 48 chr5 183757441 183757646 -19327886 + L1MC4a LINE L1 7599 7806 -2 247 313 62 31 chr5 183757775 183757871 -19327661 - MIR SINE MIR -135 127 29 250 291 47 47 chr5 183758918 183759045 -19326487 - MIR SINE MIR -61 147 21 367 228 278 0 chr5 183759434 183759568 -19325964 + MER5A DNA MER1_type 4 181 -8 412 187 195 41 chr5 183759584 183759707 -19325825 - MER5A DNA MER1_type 0 189 48 578 172 14 14 chr5 183759969 183760114 -19325418 + GA-rich Low_complexity Low_complexity 2 146 0 336 301 11 11 chr5 183760129 183760222 -19325310 - MER5A DNA MER1_type -90 99 7 1608 112 0 0 chr5 183760860 183761065 -19324467 + AluSx SINE Alu 1 205 -107 688 218 73 18 chr5 183761065 183761230 -19324302 - MER5A DNA MER1_type -15 174 1 311 361 72 12 chr5 183761804 183761970 -19323562 + MER5A DNA MER1_type 7 182 -7 2120 93 0 21 chr5 183762382 183762671 -19322861 - AluSx SINE Alu -29 283 1 2117 141 0 0 chr5 183762681 183762987 -19322545 - AluSx SINE Alu -4 308 3 2262 108 7 0 chr5 183763010 183763315 -19322217 - AluSc SINE Alu -2 307 1 217 212 50 81 chr5 183764040 183764139 -19321393 - L2 LINE L2 -86 3227 3132 203 271 0 0 chr5 183764479 183764538 -19320994 + T-rich Low_complexity Low_complexity 1 59 0 1332 152 152 33 chr5 183766060 183766330 -19319202 + AluJo SINE Alu 11 312 0 225 0 0 0 chr5 183766468 183766493 -19319039 + (TAA)n Simple_repeat Simple_repeat 1 25 0 312 263 158 0 chr5 183766500 183766541 -19318991 - L1ME4a LINE L1 -27 6094 6061 263 27 0 27 chr5 183766541 183766578 -19318954 + (CA)n Simple_repeat Simple_repeat 1 36 0 312 263 158 0 chr5 183766578 183766650 -19318882 - L1ME4a LINE L1 -60 6061 5963 2622 177 67 86 chr5 183767360 183768127 -19317405 - L1MC4 LINE L1 -384 7658 6907 363 242 44 0 chr5 183768182 183768273 -19317259 - HAL1 LINE L1 -1114 1393 1299 569 232 106 71 chr5 183768293 183768672 -19316860 - HAL1 LINE L1 -1294 1213 822 * 2035 153 77 25 chr5 183768663 183768928 -19316604 - L1MC1 LINE L1 0 6333 6038 2178 114 0 3 chr5 183768928 183769234 -19316298 + AluSx SINE Alu 2 306 -6 2035 153 77 25 chr5 183769234 183769373 -19316159 - L1MC1 LINE L1 -295 6038 5908 810 317 92 0 chr5 183769374 183769712 -19315820 - HAL1 LINE L1 -1668 839 471 282 184 0 0 chr5 183769714 183769763 -19315769 - HAL1 LINE L1 -2108 399 351 1073 154 11 11 chr5 183769776 183769951 -19315581 - AluSg/x SINE Alu -7 305 131 700 282 63 19 chr5 183769962 183770281 -19315251 - HAL1 LINE L1 -2173 334 2 487 329 33 5 chr5 183770397 183770607 -19314925 + MIR SINE MIR 35 250 -12 180 111 0 0 chr5 183770815 183770842 -19314690 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 454 297 44 80 chr5 183770864 183770976 -19314556 - L1MC5 LINE L1 -179 7782 7668 2097 104 0 74 chr5 183770976 183771314 -19314218 + AluSq SINE Alu 1 313 0 454 297 44 80 chr5 183771314 183771703 -19313829 - L1MC5 LINE L1 -293 7668 7299 21 0 0 0 chr5 183771853 183771874 -19313658 + AT_rich Low_complexity Low_complexity 1 21 0 1826 222 43 28 chr5 183771896 183772356 -19313176 + MLT1C LTR MaLR 1 467 0 459 271 26 67 chr5 183772357 183772626 -19312906 - L1MC5 LINE L1 -747 7214 6957 314 294 64 28 chr5 183773270 183773379 -19312153 + L2 LINE L2 3141 3253 -19 315 0 0 0 chr5 183773658 183773693 -19311839 + (TG)n Simple_repeat Simple_repeat 1 35 0 664 228 442 6 chr5 183773701 183774158 -19311374 - LTR50 LTR ERVL -2 793 537 1348 143 0 37 chr5 183774158 183774374 -19311158 + L1PA15 LINE L1 5954 6161 -4 664 228 442 6 chr5 183774374 183774461 -19311071 - LTR50 LTR ERVL -258 537 11 3682 194 40 38 chr5 183774562 183774897 -19310635 - L1MB7 LINE L1 -16 6168 5835 2132 117 3 7 chr5 183774897 183775196 -19310336 - AluSx SINE Alu -14 298 1 3682 194 40 38 chr5 183775196 183775696 -19309836 - L1MB7 LINE L1 -349 5835 5332 1113 226 0 0 chr5 183775696 183775904 -19309628 - AluJb SINE Alu -11 301 94 2801 204 102 6 chr5 183775906 183776589 -19308943 - L1MB7 LINE L1 -817 5329 4581 233 271 73 52 chr5 183776785 183776881 -19308651 + L2 LINE L2 3156 3253 -19 757 220 60 0 chr5 183777050 183777232 -19308300 + L1MB7 LINE L1 5992 6184 0 1094 223 0 0 chr5 183777927 183778151 -19307381 + AluJb SINE Alu 88 311 -1 417 287 57 19 chr5 183778307 183778464 -19307068 - MIR SINE MIR -79 183 21 23 33 0 0 chr5 183779704 183779734 -19305798 + AT_rich Low_complexity Low_complexity 1 30 0 364 302 144 43 chr5 183780615 183780963 -19304569 + Charlie8 DNA MER1_type 46 428 -1989 337 268 29 36 chr5 183782364 183782502 -19303030 + MIR SINE MIR 11 147 -115 310 297 30 30 chr5 183782504 183782605 -19302927 - MIR SINE MIR -148 114 14 187 206 44 0 chr5 183783137 183783205 -19302327 + CT-rich Low_complexity Low_complexity 3 73 0 506 336 91 13 chr5 183783729 183783961 -19301571 + MIR SINE MIR 12 261 -1 925 290 83 42 chr5 183785446 183785832 -19299700 - LTR16A LTR ERVL -30 420 19 280 289 56 11 chr5 183785867 183785957 -19299575 - L2 LINE L2 -15 3257 3164 453 276 46 0 chr5 183785980 183786132 -19299400 - MIR SINE MIR -8 254 96 1347 189 18 57 chr5 183786296 183786629 -19298903 + MER33 DNA MER1_type 1 320 -4 183 42 0 0 chr5 183787597 183787621 -19297911 + (TA)n Simple_repeat Simple_repeat 2 25 0 517 262 61 6 chr5 183788271 183788435 -19297097 + MIR SINE MIR 72 244 -18 942 81 0 0 chr5 183788538 183788662 -19296870 - L1MA4 LINE L1 -11 6289 6166 2013 114 59 0 chr5 183788702 183788991 -19296541 + AluSq SINE Alu 1 306 -7 333 258 67 11 chr5 183789111 183789200 -19296332 - MLT1H1 LTR MaLR -402 153 60 1544 182 0 81 chr5 183789223 183789531 -19296001 - AluJo SINE Alu -17 285 3 1198 13 13 7 chr5 183789553 183789705 -19295827 + (TTTC)n Simple_repeat Simple_repeat 4 156 0 452 111 37 37 chr5 183789706 183789814 -19295718 + CT-rich Low_complexity Low_complexity 3 110 0 284 381 57 24 chr5 183790037 183790247 -19295285 - L3 LINE CR1 -578 999 783 706 302 62 32 chr5 183790517 183790950 -19294582 - L1M4 LINE L1 -1781 4365 3933 2337 211 30 11 chr5 183790950 183791592 -19293940 - L1ME2 LINE L1 -338 5826 3813 933 161 113 69 chr5 183791615 183791752 -19293780 - L1M4 LINE L1 -835 5311 5182 2227 119 0 10 chr5 183791752 183792055 -19293477 + AluSc SINE Alu 1 300 -9 933 161 113 69 chr5 183792055 183792252 -19293280 - L1M4 LINE L1 -964 5182 4962 350 292 96 44 chr5 183792259 183792625 -19292907 - L1ME2 LINE L1 -2375 3771 3387 1406 93 71 31 chr5 183792633 183792858 -19292674 + AluSg/x SINE Alu 66 299 -11 335 280 68 42 chr5 183793014 183793132 -19292400 + L2 LINE L2 2493 2613 -701 422 265 0 86 chr5 183793237 183793388 -19292144 + L2 LINE L2 2634 2771 -543 2105 138 20 0 chr5 183794498 183794802 -19290730 - AluSx SINE Alu -2 310 1 3631 93 8 6 chr5 183794960 183795455 -19290077 - L1PA15 LINE L1 -8 6157 5662 1946 126 10 7 chr5 183795498 183795791 -19289741 - L1PA15 LINE L1 -492 5673 5380 1766 144 70 0 chr5 183796915 183797200 -19288332 - AluJb SINE Alu -7 305 1 495 196 116 0 chr5 183797221 183797333 -19288199 + MER5C DNA MER1_type 1 125 -199 380 135 14 0 chr5 183797604 183797678 -19287854 + (TA)n Simple_repeat Simple_repeat 1 75 0 330 26 0 0 chr5 183797678 183797717 -19287815 + (GA)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr5 183798421 183798450 -19287082 + AT_rich Low_complexity Low_complexity 1 29 0 6768 68 25 19 chr5 183798450 183800011 -19285521 - SVA Other Other -760 1386 12 194 241 69 17 chr5 183800728 183800786 -19284746 + L2 LINE L2 3209 3269 -3 1790 179 0 3 chr5 183801215 183801500 -19284032 - AluJb SINE Alu -28 284 1 223 213 0 49 chr5 183801968 183802029 -19283503 - MER5A DNA MER1_type -5 184 127 598 225 56 19 chr5 183802031 183802191 -19283341 + L1MEd LINE L1 2 167 -5952 258 175 127 0 chr5 183802761 183802824 -19282708 + L1MEd LINE L1 770 840 -5279 258 311 38 19 chr5 183802824 183802930 -19282602 + MER5A DNA MER1_type 60 167 -22 221 282 61 46 chr5 183802827 183802958 -19282574 - MER5A DNA MER1_type -50 139 7 * 234 162 18 153 chr5 183804219 183804330 -19281202 - L1ME4a LINE L1 -91 6030 5935 334 203 188 65 chr5 183804553 183804691 -19280841 + L2 LINE L2 3159 3313 0 464 266 76 33 chr5 183804771 183804996 -19280536 - L1ME4a LINE L1 -392 5729 5496 1364 212 3 33 chr5 183805579 183805886 -19279646 - AluJo SINE Alu -13 299 2 2097 134 0 0 chr5 183805938 183806228 -19279304 + AluSx SINE Alu 3 292 -20 219 273 60 116 chr5 183806376 183806592 -19278940 + MIR SINE MIR 3 206 -56 7509 28 0 1 chr5 183806701 183808346 -19277186 - L1PA4 LINE L1 -2 6153 4512 393 298 92 14 chr5 183808434 183808575 -19276957 + MIR SINE MIR 13 164 -98 184 278 93 21 chr5 183809138 183809235 -19276297 + MIR SINE MIR 156 259 -3 580 226 98 28 chr5 183811088 183811374 -19274158 - MLT1G1 LTR MaLR 0 595 232 184 250 25 0 chr5 183813301 183813341 -19272191 + MIR SINE MIR 48 88 -174 1544 207 8 27 chr5 183813345 183813729 -19271803 - MLT1A1 LTR MaLR 0 365 1 402 304 29 7 chr5 183813742 183813880 -19271652 + MIR SINE MIR 102 242 -20 210 219 0 0 chr5 183817178 183817219 -19268313 - MIR SINE MIR -2 260 220 774 96 0 32 chr5 183817658 183817783 -19267749 - AluJb SINE Alu -1 311 191 474 268 33 78 chr5 183817938 183817970 -19267562 - MIR SINE MIR -65 197 165 1555 146 9 115 chr5 183817970 183818319 -19267213 + AluJo SINE Alu 1 312 0 474 268 33 78 chr5 183818319 183818439 -19267093 - MIR SINE MIR -97 165 52 204 268 18 18 chr5 183818494 183818550 -19266982 - MIR SINE MIR -2 260 205 365 306 0 0 chr5 183818596 183818707 -19266825 + MER117 DNA MER1_type 50 160 -37 555 296 100 21 chr5 183818768 183819008 -19266524 + MIR SINE MIR 2 260 -2 2367 94 3 0 chr5 183820301 183820600 -19264932 + AluSc SINE Alu 1 300 -9 225 0 0 0 chr5 183821099 183821124 -19264408 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2251 111 0 0 chr5 183821128 183821417 -19264115 - AluSx SINE Alu -23 289 1 461 288 44 44 chr5 183821930 183822090 -19263442 - MIR SINE MIR -90 172 13 371 348 82 6 chr5 183822212 183822370 -19263162 - L2 LINE L2 0 3272 3103 318 313 198 0 chr5 183822523 183822715 -19262817 - MIR SINE MIR -1 261 32 2098 146 0 0 chr5 183823306 183823607 -19261925 - AluSx SINE Alu -11 301 1 189 147 0 0 chr5 183825138 183825172 -19260360 + (TA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 183825935 183825956 -19259576 + AT_rich Low_complexity Low_complexity 1 21 0 358 237 82 35 chr5 183826161 183826311 -19259221 + MIR SINE MIR 99 253 -9 2432 168 45 0 chr5 183826648 183827095 -19258437 - MLT1C LTR MaLR 0 467 1 255 298 122 63 chr5 183827259 183827464 -19258068 - MIR SINE MIR -6 256 40 313 315 87 105 chr5 183828781 183829229 -19256303 + L2 LINE L2 2830 3269 -3 845 296 77 34 chr5 183829397 183829867 -19255665 + MLT1L LTR MaLR 126 615 0 197 321 83 46 chr5 183829953 183830062 -19255470 + MIR SINE MIR 16 128 -80 703 298 18 25 chr5 183831007 183831286 -19254246 - MLT1J LTR MaLR -161 350 74 2148 127 0 7 chr5 183831413 183831713 -19253819 - AluSx SINE Alu -14 298 1 605 157 7 34 chr5 183833313 183833460 -19252072 + CT-rich Low_complexity Low_complexity 2 144 0 219 36 0 0 chr5 183833460 183833488 -19252044 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 304 257 70 38 chr5 183833691 183833794 -19251738 - MIR3 SINE MIR -32 176 69 830 240 96 37 chr5 183833815 183834190 -19251342 - L1ME3A LINE L1 -5 6165 5769 378 0 0 0 chr5 183835331 183835373 -19250159 + (TG)n Simple_repeat Simple_repeat 2 43 0 266 233 50 0 chr5 183836410 183836470 -19249062 - MLT1J LTR MaLR -202 309 247 2255 91 0 0 chr5 183836896 183837212 -19248320 + AluSx SINE Alu 1 316 0 321 135 0 0 chr5 183837335 183837387 -19248145 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 510 295 53 62 chr5 183837679 183837923 -19247609 + L2 LINE L2 2453 2694 -620 309 246 0 0 chr5 183837943 183838012 -19247520 + MER69 DNA AcHobo 460 528 -1998 306 0 0 0 chr5 183839724 183839758 -19245774 + (TG)n Simple_repeat Simple_repeat 2 35 0 396 293 0 9 chr5 183840157 183840273 -19245259 - MIR SINE MIR -6 256 142 673 289 73 35 chr5 183840273 183840643 -19244889 - MLT1J1 LTR MaLR 0 446 63 319 246 36 0 chr5 183841129 183841239 -19244293 + (TA)n Simple_repeat Simple_repeat 2 115 0 25 75 0 0 chr5 183841283 183841336 -19244196 + AT_rich Low_complexity Low_complexity 1 53 0 701 161 9 0 chr5 183841336 183841448 -19244084 - FLAM_C SINE Alu -18 125 13 2251 103 3 7 chr5 183841728 183842029 -19243503 - AluSc SINE Alu -9 300 1 230 254 175 0 chr5 183842053 183842167 -19243365 - L1ME3A LINE L1 -226 5944 5811 327 226 165 0 chr5 183842432 183842547 -19242985 - MLT1J1 LTR MaLR -264 182 49 1859 247 110 10 chr5 183842595 183843202 -19242330 - L1ME3 LINE L1 -17 6145 5478 669 197 34 7 chr5 183843215 183843362 -19242170 - MER58B DNA MER1_type 0 341 191 548 294 120 18 chr5 183843372 183843603 -19241929 - MLT1J LTR MaLR -207 304 39 1990 79 0 12 chr5 183843603 183843857 -19241675 + AluY SINE Alu 60 310 -1 548 294 120 18 chr5 183843857 183843901 -19241631 - MLT1J LTR MaLR -472 39 1 361 322 73 50 chr5 183843911 183844163 -19241369 - L1MEd LINE L1 -4894 1225 961 2328 95 0 3 chr5 183844163 183844467 -19241065 - AluSg SINE Alu -5 305 3 361 322 73 50 chr5 183844467 183844556 -19240976 - L1MEd LINE L1 -5158 961 876 2624 42 0 0 chr5 183844781 183845087 -19240445 - AluY SINE Alu -5 306 1 2102 150 0 6 chr5 183845535 183845849 -19239683 - AluSx SINE Alu 0 312 1 295 257 136 7 chr5 183846476 183846616 -19238916 - L1ME4a LINE L1 0 6121 5964 287 315 87 0 chr5 183846639 183846731 -19238801 - MIR SINE MIR -150 112 13 2138 134 0 0 chr5 183848181 183848473 -19237059 - AluSx SINE Alu -20 292 1 315 319 49 54 chr5 183849773 183849958 -19235574 - MIR3 SINE MIR 0 208 25 294 364 30 23 chr5 183850305 183850437 -19235095 - MIR SINE MIR -114 148 16 22 0 0 0 chr5 183851012 183851034 -19234498 + AT_rich Low_complexity Low_complexity 1 22 0 201 203 29 87 chr5 183851812 183851950 -19233582 + (TTTAG)n Simple_repeat Simple_repeat 3 132 0 2060 225 19 16 chr5 183852547 183853059 -19232473 - LTR40a LTR ERVL -5 514 1 207 114 0 0 chr5 183853497 183853532 -19232000 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 252 0 0 0 chr5 183853531 183853559 -19231973 + (GA)n Simple_repeat Simple_repeat 1 28 0 6950 43 0 0 chr5 183853651 183854488 -19231044 + L1PA5 LINE L1 5315 6151 -3 2055 90 90 0 chr5 183856000 183856278 -19229254 + AluSx SINE Alu 5 307 -5 908 186 39 13 chr5 183856474 183856705 -19228827 + MER96B DNA MER1_type? 1 237 -180 833 239 5 11 chr5 183856895 183857083 -19228449 - MLT1B LTR MaLR -16 374 188 304 188 12 12 chr5 183857083 183857168 -19228364 + GA-rich Low_complexity Low_complexity 1 85 0 763 141 5 76 chr5 183857189 183857373 -19228159 - MLT1B LTR MaLR -200 174 4 180 259 74 19 chr5 183858164 183858218 -19227314 + L2 LINE L2 2083 2139 -1175 335 294 149 31 chr5 183858892 183859086 -19226446 - MIR SINE MIR -7 255 39 621 90 0 0 chr5 183859271 183859360 -19226172 + (GA)n Simple_repeat Simple_repeat 2 90 0 795 176 103 114 chr5 183859585 183859875 -19225657 + MER2 DNA MER2_type 59 345 0 1891 69 4 8 chr5 183860112 183860384 -19225148 - AluY SINE Alu 0 307 37 2778 203 37 24 chr5 183860465 183861092 -19224440 + LTR27 LTR ERV1 2 636 0 2427 271 72 38 chr5 183861748 183862287 -19223245 - HAL1 LINE L1 -83 2424 1905 2176 138 0 6 chr5 183862287 183862598 -19222934 - AluSx SINE Alu -3 309 1 2427 271 72 38 chr5 183862598 183863351 -19222181 - HAL1 LINE L1 -602 1905 1088 2394 159 49 40 chr5 183863448 183864019 -19221513 - L1MB7 LINE L1 -16 6666 6091 979 164 0 0 chr5 183864019 183864165 -19221367 - FRAM SINE Alu -17 159 14 2099 200 64 2 chr5 183864181 183864954 -19220578 - L1MB7 LINE L1 -573 6103 5286 3700 174 30 18 chr5 183864956 183865629 -19219903 + MER54B LTR ERVL 1 681 -112 567 208 0 0 chr5 183865664 183865794 -19219738 + L1 LINE L1 2902 3031 -3115 * 4149 265 100 30 chr5 183865788 183866006 -19219526 - L1MB7 LINE L1 -1489 5155 4954 1978 128 0 49 chr5 183866006 183866333 -19219199 - AluJb SINE Alu -1 311 1 4149 265 100 30 chr5 183866333 183866687 -19218845 - L1MB7 LINE L1 -1690 4954 4626 1700 161 19 59 chr5 183866687 183867010 -19218522 - AluSx SINE Alu 0 312 3 4149 265 100 30 chr5 183867010 183868725 -19216807 - L1MB7 LINE L1 -2018 4626 2703 1372 209 37 11 chr5 183868774 183869124 -19216408 - L1MA4 LINE L1 -4 6296 5938 371 166 17 79 chr5 183869126 183869325 -19216207 - L1MB7 LINE L1 -3952 2693 2521 1067 197 25 4 chr5 183869385 183869624 -19215908 - L1MB7 LINE L1 -6283 259 16 342 255 101 58 chr5 183869677 183869865 -19215667 - HAL1 LINE L1 -1448 1059 864 375 282 24 127 chr5 183869882 183870029 -19215503 - MIR SINE MIR -2 260 148 2911 6 0 0 chr5 183870029 183870343 -19215189 + AluYb8 SINE Alu 1 314 -4 375 282 24 127 chr5 183870343 183870447 -19215085 - MIR SINE MIR -114 148 35 506 298 63 0 chr5 183870565 183870803 -19214729 - HAL1 LINE L1 -2243 264 12 1510 293 64 26 chr5 183870809 183871591 -19213941 - L1MEd LINE L1 -5282 837 26 757 271 98 78 chr5 183871686 183872188 -19213344 + L3 LINE CR1 956 1467 -110 966 274 8 4 chr5 183872204 183872445 -19213087 + MIR SINE MIR 11 252 -10 357 113 0 16 chr5 183872533 183872595 -19212937 - MLT1D LTR MaLR 0 505 445 417 169 14 0 chr5 183872601 183872672 -19212860 - AluS SINE Alu -233 76 5 1501 98 5 0 chr5 183872674 183872916 -19212616 + AluSc SINE Alu 87 329 0 1305 220 83 40 chr5 183872919 183873342 -19212190 - MLT1D LTR MaLR -64 441 1 416 306 84 35 chr5 183873688 183873972 -19211560 - MLT1K LTR MaLR 0 588 291 249 369 56 19 chr5 183874008 183874168 -19211364 - MLT1K LTR MaLR -416 172 7 359 339 55 22 chr5 183875296 183875479 -19210053 + MER5A DNA MER1_type 1 189 0 1477 253 140 2 chr5 183875479 183875937 -19209595 - LTR33 LTR ERVL 0 521 1 490 278 20 33 chr5 183877237 183877388 -19208144 + MIR SINE MIR 52 200 -62 1973 145 3 28 chr5 183877394 183877712 -19207820 + AluJb SINE Alu 1 310 -2 534 273 63 44 chr5 183878046 183878251 -19207281 + MIR SINE MIR 48 256 -6 364 300 131 39 chr5 183878437 183878963 -19206569 + L2 LINE L2 2361 3226 -87 2119 128 9 0 chr5 183879260 183879588 -19205944 + L1PB4 LINE L1 5815 6145 -11 2497 58 0 16 chr5 183879665 183879973 -19205559 + AluY SINE Alu 1 303 -8 1986 99 111 15 chr5 183880065 183880407 -19205125 + THE1C LTR MaLR 1 375 0 217 322 23 23 chr5 183880407 183880494 -19205038 + MIR SINE MIR 36 122 -140 * 637 307 118 43 chr5 183880478 183880750 -19204782 + L2 LINE L2 2889 3200 -113 204 40 0 0 chr5 183880750 183880775 -19204757 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 637 307 118 43 chr5 183880775 183880893 -19204639 + L2 LINE L2 3200 3308 -5 1631 143 69 37 chr5 183881117 183881467 -19204065 - MER46B DNA MER2_type 0 236 1 1157 249 86 113 chr5 183881526 183881661 -19203871 + L2 LINE L2 2417 2554 -759 6121 81 69 31 chr5 183881661 183882958 -19202574 - L1PA10 LINE L1 0 6168 4845 292 71 0 0 chr5 183882958 183883000 -19202532 - MADE1 DNA Mariner -38 42 1 1157 249 86 113 chr5 183883000 183883450 -19202082 + L2 LINE L2 2553 3031 -282 3185 114 37 2 chr5 183883450 183883968 -19201564 + L1MA4A LINE L1 5767 6302 -1 1157 249 86 113 chr5 183883968 183884244 -19201288 + L2 LINE L2 3031 3313 0 8746 29 4 0 chr5 183884484 183885624 -19199908 - L1P LINE L1 -2609 3537 2393 3573 111 20 22 chr5 183885730 183885849 -19199683 + L1PA16 LINE L1 5380 5498 -668 1901 170 7 0 chr5 183885849 183886149 -19199383 + AluSx SINE Alu 3 304 -8 3573 111 20 22 chr5 183886149 183886625 -19198907 + L1PA16 LINE L1 5498 5974 -192 826 239 0 0 chr5 183886627 183886786 -19198746 + AluJb SINE Alu 138 296 -16 901 199 31 15 chr5 183886786 183886982 -19198550 + L1PA16 LINE L1 5959 6157 -9 211 304 0 0 chr5 183887017 183887073 -19198459 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 214 286 174 0 chr5 183887999 183888097 -19197435 + MIR SINE MIR 67 181 -81 193 417 9 19 chr5 183888246 183888354 -19197178 - MIR SINE MIR -68 140 34 456 372 52 10 chr5 183888488 183888872 -19196660 - LTR33 LTR ERVL -111 410 11 788 185 119 0 chr5 183889153 183889304 -19196228 - FAM SINE Alu -5 170 2 2160 124 7 3 chr5 183889331 183889630 -19195902 - AluSx SINE Alu -10 302 3 2214 105 3 0 chr5 183889637 183889931 -19195601 - AluSx SINE Alu -17 295 1 219 309 0 0 chr5 183890637 183890705 -19194827 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 3476 180 133 27 chr5 183890796 183892089 -19193443 + L1MC3 LINE L1 6422 7977 -18 2085 132 14 0 chr5 183892098 183892394 -19193138 + AluSx SINE Alu 1 300 -12 1542 17 11 0 chr5 183893361 183893557 -19191975 - AluY SINE Alu 0 330 133 2255 101 0 3 chr5 183893557 183893854 -19191678 - AluSg SINE Alu -12 298 3 2560 43 0 0 chr5 183894168 183894467 -19191065 - AluY SINE Alu -12 299 1 2102 150 0 6 chr5 183894915 183895229 -19190303 - AluSx SINE Alu 0 312 1 295 257 136 7 chr5 183895856 183895996 -19189536 - L1ME4a LINE L1 0 6121 5964 287 315 87 0 chr5 183896019 183896111 -19189421 - MIR SINE MIR -150 112 13 2138 134 0 0 chr5 183897561 183897853 -19187679 - AluSx SINE Alu -20 292 1 317 306 32 57 chr5 183899153 183899310 -19186222 - MIR3 SINE MIR 0 208 56 294 364 30 23 chr5 183899685 183899817 -19185715 - MIR SINE MIR -114 148 16 22 0 0 0 chr5 183900392 183900414 -19185118 + AT_rich Low_complexity Low_complexity 1 22 0 201 203 29 87 chr5 183901192 183901330 -19184202 + (TTTAG)n Simple_repeat Simple_repeat 3 132 0 2060 225 19 16 chr5 183901927 183902439 -19183093 - LTR40a LTR ERVL -5 514 1 207 114 0 0 chr5 183902877 183902912 -19182620 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 252 0 0 0 chr5 183902911 183902939 -19182593 + (GA)n Simple_repeat Simple_repeat 1 28 0 6809 50 0 0 chr5 183903031 183903866 -19181666 + L1PA5 LINE L1 5315 6149 -5 21 0 0 0 chr5 183903866 183903887 -19181645 + AT_rich Low_complexity Low_complexity 1 21 0 2055 90 90 0 chr5 183905380 183905658 -19179874 + AluSx SINE Alu 5 307 -5 908 186 39 13 chr5 183905854 183906085 -19179447 + MER96B DNA MER1_type? 1 237 -180 891 255 5 10 chr5 183906259 183906463 -19179069 - MLT1B LTR MaLR 0 390 188 304 188 12 12 chr5 183906463 183906548 -19178984 + GA-rich Low_complexity Low_complexity 1 85 0 818 161 5 88 chr5 183906548 183906753 -19178779 - MLT1B LTR MaLR -183 191 4 336 294 149 31 chr5 183908273 183908467 -19177065 - MIR SINE MIR -7 255 39 621 90 0 0 chr5 183908652 183908741 -19176791 + (GA)n Simple_repeat Simple_repeat 2 90 0 847 172 103 114 chr5 183908966 183909256 -19176276 + MER2 DNA MER2_type 59 345 0 1905 69 4 8 chr5 183909493 183909765 -19175767 - AluY SINE Alu 0 307 37 2785 203 37 24 chr5 183909846 183910473 -19175059 + LTR27 LTR ERV1 2 636 0 2767 269 73 39 chr5 183911129 183911668 -19173864 - HAL1 LINE L1 -83 2424 1905 2141 138 0 6 chr5 183911668 183911979 -19173553 - AluSx SINE Alu -3 309 1 2767 269 73 39 chr5 183911979 183912732 -19172800 - HAL1 LINE L1 -602 1905 1088 2440 159 49 40 chr5 183912829 183913400 -19172132 - L1MB7 LINE L1 -16 6168 5593 970 164 0 0 chr5 183913400 183913546 -19171986 - FRAM SINE Alu -17 159 14 2253 200 64 2 chr5 183913562 183914335 -19171197 - L1MB7 LINE L1 -573 5605 4788 3963 174 30 18 chr5 183914337 183915010 -19170522 + MER54B LTR ERVL 1 681 -112 569 223 0 0 chr5 183915045 183915175 -19170357 + L1 LINE L1 2902 3031 -3115 * 833 208 30 9 chr5 183915169 183915400 -19170132 - L1MB7 LINE L1 -1489 4657 4422 2163 120 3 0 chr5 183915404 183915703 -19169829 - AluY SINE Alu -11 300 1 220 419 59 16 chr5 183915717 183915903 -19169629 - L2 LINE L2 -71 3201 3008 573 15 0 0 chr5 183915942 183916008 -19169524 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 185 337 58 0 chr5 183916073 183916159 -19169373 - L2 LINE L2 -661 2653 2563 1472 166 65 0 chr5 183916247 183916554 -19168978 - L1 LINE L1 -1370 4776 4450 354 267 12 0 chr5 183916859 183916945 -19168587 - L2 LINE L2 0 3313 3227 229 286 0 16 chr5 183916956 183917019 -19168513 + (CATA)n Simple_repeat Simple_repeat 2 63 0 * 340 292 18 18 chr5 183916977 183917090 -19168442 + (TATG)n Simple_repeat Simple_repeat 3 115 0 616 28 0 0 chr5 183918491 183918563 -19166969 + L1PA5 LINE L1 6075 6146 -8 29 28 0 0 chr5 183919074 183919110 -19166422 + AT_rich Low_complexity Low_complexity 1 36 0 29 28 0 0 chr5 183919125 183919161 -19166371 + AT_rich Low_complexity Low_complexity 1 36 0 276 212 15 0 chr5 183919163 183919229 -19166303 - L1ME4a LINE L1 -3 6118 6052 4219 249 27 56 chr5 183919236 183919667 -19165865 + L1M4 LINE L1 3239 3681 -2465 1936 159 0 0 chr5 183919667 183919956 -19165576 + AluJb SINE Alu 1 289 -23 4219 249 27 56 chr5 183919956 183921194 -19164338 + L1M4 LINE L1 3681 4859 -1287 8100 194 86 7 chr5 183921217 183922279 -19163253 - L1MC3 LINE L1 -3 7782 6806 273 57 0 0 chr5 183922279 183922314 -19163218 + (TG)n Simple_repeat Simple_repeat 2 36 0 8100 194 86 7 chr5 183922314 183923103 -19162429 - L1MC3 LINE L1 -979 6806 5784 1474 174 88 80 chr5 183923111 183923697 -19161835 + L1M4 LINE L1 4857 5426 -746 902 101 0 43 chr5 183923708 183923847 -19161685 + FLAM_C SINE Alu 1 133 0 783 301 167 38 chr5 183923853 183924302 -19161230 + L2 LINE L2 2806 3312 -1 1446 202 0 32 chr5 183924789 183925066 -19160466 + AluJo SINE Alu 7 274 -38 393 302 80 77 chr5 183925765 183925798 -19159734 - L2 LINE L2 -339 2975 2944 248 70 23 0 chr5 183925798 183925841 -19159691 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 393 302 80 77 chr5 183925841 183926208 -19159324 - L2 LINE L2 -370 2944 2574 292 227 0 93 chr5 183926215 183926312 -19159220 - L2 LINE L2 -676 2638 2551 852 293 111 20 chr5 183927041 183927481 -19158051 + L2 LINE L2 2817 3296 -17 261 130 101 29 chr5 183927503 183927572 -19157960 - MIR SINE MIR -70 192 119 22 94 0 0 chr5 183929312 183929376 -19156156 + AT_rich Low_complexity Low_complexity 1 64 0 877 243 65 24 chr5 183929400 183929647 -19155885 - MIR SINE MIR -5 257 1 2045 145 39 25 chr5 183930194 183930553 -19154979 + THE1B LTR MaLR 1 364 0 355 217 25 42 chr5 183931089 183931209 -19154323 + L1ME LINE L1 5386 5503 -663 406 19 0 0 chr5 183931900 183931953 -19153579 - L1PA2 LINE L1 0 6155 6103 6049 16 3 0 chr5 183931953 183932644 -19152888 + L1PA2 LINE L1 5404 6096 -59 1428 214 51 43 chr5 183932681 183933096 -19152436 - MLT2C2 LTR ERVL -9 455 38 3432 177 51 20 chr5 183933105 183933790 -19151742 - ERVL-C2 LTR ERVL 0 5764 5059 510 258 37 45 chr5 183936728 183936996 -19148536 + L1MA9 LINE L1 6006 6271 -41 250 337 0 30 chr5 183937021 183937122 -19148410 - MIR SINE MIR -148 114 17 2330 73 3 10 chr5 183939116 183939417 -19146115 - AluSx SINE Alu -13 299 1 23 0 0 0 chr5 183939970 183939993 -19145539 + AT_rich Low_complexity Low_complexity 1 23 0 531 192 40 40 chr5 183940941 183941066 -19144466 + L2 LINE L2 3189 3313 0 220 279 0 51 chr5 183941121 183941200 -19144332 + L2 LINE L2 3186 3260 -12 3236 99 2 2 chr5 183941414 183941870 -19143662 + L1PA13 LINE L1 5333 5788 -380 343 200 9 9 chr5 183941871 183941976 -19143556 + (TA)n Simple_repeat Simple_repeat 2 106 0 252 0 0 0 chr5 183941998 183942026 -19143506 + (CA)n Simple_repeat Simple_repeat 2 29 0 2489 95 11 5 chr5 183942026 183942394 -19143138 + L1PA13 LINE L1 5793 6162 -1 514 278 95 53 chr5 183942468 183942731 -19142801 + L2 LINE L2 3039 3312 -1 225 329 24 12 chr5 183945498 183945583 -19139949 + MIR SINE MIR 28 113 -149 284 376 30 15 chr5 183945657 183945790 -19139742 + MER5A DNA MER1_type 55 189 0 265 302 123 0 chr5 183946166 183946272 -19139260 + L2 LINE L2 3150 3268 -4 2042 111 0 32 chr5 183947086 183947401 -19138131 - AluY SINE Alu -6 305 1 2124 128 9 0 chr5 183947478 183947806 -19137726 - L1PB4 LINE L1 -11 6145 5815 359 300 131 39 chr5 183948103 183948629 -19136903 - L2 LINE L2 -87 3226 2361 536 256 74 45 chr5 183948844 183949020 -19136512 - MIR SINE MIR -34 228 48 1940 145 3 28 chr5 183949354 183949672 -19135860 - AluJb SINE Alu -2 310 1 286 284 39 10 chr5 183949678 183949780 -19135752 - MIR SINE MIR -62 200 96 4668 96 8 0 chr5 183949880 183950516 -19135016 - THE1B-int LTR MaLR -939 641 1 1712 164 32 51 chr5 183950516 183950887 -19134645 - THE1B LTR MaLR 0 364 1 818 212 18 0 chr5 183950887 183951052 -19134480 - MST-int LTR MaLR -538 1113 946 762 281 19 8 chr5 183952939 183953202 -19132330 + L1MA9 LINE L1 6006 6271 -41 228 346 0 30 chr5 183953226 183953327 -19132205 - MIR SINE MIR -148 114 17 2327 80 3 7 chr5 183955320 183955622 -19129910 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 183956175 183956198 -19129334 + AT_rich Low_complexity Low_complexity 1 23 0 531 192 40 40 chr5 183957146 183957271 -19128261 + L2 LINE L2 3189 3313 0 220 279 0 51 chr5 183957326 183957405 -19128127 + L2 LINE L2 3186 3260 -12 3257 97 2 2 chr5 183957619 183958075 -19127457 + L1PA13 LINE L1 5333 5788 -380 343 200 9 9 chr5 183958076 183958181 -19127351 + (TA)n Simple_repeat Simple_repeat 1 105 0 252 0 0 0 chr5 183958203 183958231 -19127301 + (CA)n Simple_repeat Simple_repeat 2 29 0 2489 95 11 5 chr5 183958231 183958599 -19126933 + L1PA13 LINE L1 5793 6162 -1 494 281 95 53 chr5 183958673 183958936 -19126596 + L2 LINE L2 3039 3312 -1 225 329 24 12 chr5 183961706 183961791 -19123741 + MIR SINE MIR 28 113 -149 284 376 30 15 chr5 183961865 183961998 -19123534 + MER5A DNA MER1_type 55 189 0 265 302 123 0 chr5 183962374 183962480 -19123052 + L2 LINE L2 3150 3268 -4 1904 136 0 56 chr5 183963294 183963618 -19121914 - AluSx SINE Alu -6 306 1 669 226 50 6 chr5 183963838 183964019 -19121513 + MER5A DNA MER1_type 1 189 0 294 285 62 15 chr5 183964227 183964357 -19121175 + MIR SINE MIR 91 226 -36 384 302 24 16 chr5 183964413 183964539 -19120993 + L2 LINE L2 3187 3313 0 202 114 0 29 chr5 183964539 183964574 -19120958 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 1871 134 18 24 chr5 183966148 183966483 -19119049 - L1PB3 LINE L1 -3 6151 5819 548 269 60 35 chr5 183967112 183967313 -19118219 + MIR SINE MIR 20 225 -37 872 271 33 12 chr5 183968474 183968718 -19116814 - MIR SINE MIR -10 252 4 648 200 36 0 chr5 183968931 183969041 -19116491 + FLAM_A SINE Alu 1 114 -19 21 0 0 0 chr5 183969090 183969111 -19116421 + AT_rich Low_complexity Low_complexity 1 21 0 252 226 0 0 chr5 183969209 183969271 -19116261 - L1ME LINE L1 -322 5799 5738 1105 327 96 30 chr5 183969314 183969925 -19115607 + L2 LINE L2 2393 3037 -276 397 247 109 23 chr5 183970647 183970799 -19114733 - MIR3 SINE MIR -13 195 22 240 277 11 43 chr5 183971585 183971679 -19113853 - L1ME4a LINE L1 -53 6068 5978 318 50 0 0 chr5 183972528 183972568 -19112964 + (TA)n Simple_repeat Simple_repeat 2 41 0 25 51 0 0 chr5 183973541 183973580 -19111952 + AT_rich Low_complexity Low_complexity 1 39 0 333 272 58 29 chr5 183973580 183973753 -19111779 - L1ME4a LINE L1 -9 6112 5935 297 222 12 12 chr5 183973753 183973834 -19111698 - L1ME LINE L1 -393 5728 5648 21 0 0 0 chr5 183974886 183974907 -19110625 + AT_rich Low_complexity Low_complexity 1 21 0 320 336 85 52 chr5 183974909 183975180 -19110352 - L2 LINE L2 0 3272 2993 2303 263 87 23 chr5 183975881 183976903 -19108629 - L2 LINE L2 -10 3303 2222 344 259 65 50 chr5 183977869 183978008 -19107524 - L2 LINE L2 0 3313 3173 * 518 242 139 0 chr5 183977994 183978159 -19107373 - MIR SINE MIR 0 262 75 190 244 167 51 chr5 183979040 183979118 -19106414 - L2 LINE L2 -5 3267 3181 186 322 146 62 chr5 183979672 183980200 -19105332 - L2 LINE L2 -1035 2279 1708 2305 114 0 0 chr5 183980315 183980623 -19104909 + AluSx SINE Alu 3 310 -2 25 0 0 0 chr5 183981494 183981519 -19104013 + AT_rich Low_complexity Low_complexity 1 25 0 2230 122 0 3 chr5 183981519 183981894 -19103638 + AluSx SINE Alu 1 374 0 21 0 0 0 chr5 183982091 183982112 -19103420 + AT_rich Low_complexity Low_complexity 1 21 0 3745 208 10 10 chr5 183982132 183982828 -19102704 + L1PA13 LINE L1 2 697 -6090 * 5917 151 14 5 chr5 183982826 183984011 -19101521 + L1PA15 LINE L1 4960 6157 -8 929 55 78 8 chr5 183984637 183984765 -19100767 + MER85 DNA T2_type 1 137 -2 301 200 54 100 chr5 183985342 183985472 -19100060 - L1ME1 LINE L1 -7 6158 6032 246 299 13 0 chr5 183985551 183985628 -19099904 - MIR SINE MIR 0 262 185 1793 150 25 0 chr5 183985663 183985989 -19099543 - L1MA4 LINE L1 -8 6292 5959 311 353 133 7 chr5 183986030 183986180 -19099352 - MER91A DNA MER1_type 0 196 28 21 36 0 0 chr5 183986828 183986856 -19098676 + AT_rich Low_complexity Low_complexity 1 28 0 743 215 21 42 chr5 183987481 183987672 -19097860 + MER5A DNA MER1_type 3 189 0 670 286 96 38 chr5 183987738 183988329 -19097203 - L1ME LINE L1 -533 5637 5004 2443 216 75 35 chr5 183988388 183989105 -19096427 - L1ME1 LINE L1 -4 6162 5417 273 247 45 34 chr5 183989108 183989197 -19096335 - L1P LINE L1 -1156 4990 4901 286 294 0 37 chr5 183989623 183989759 -19095773 - L1ME4a LINE L1 0 6121 5991 29 0 0 0 chr5 183990009 183990038 -19095494 + AT_rich Low_complexity Low_complexity 1 29 0 1952 169 77 5 chr5 183991055 183991458 -19094074 + MSTB1 LTR MaLR 1 432 0 33 25 0 0 chr5 183991701 183991741 -19093791 + AT_rich Low_complexity Low_complexity 1 40 0 236 299 10 10 chr5 183991743 183991848 -19093684 - L1M3 LINE L1 -384 5799 5695 498 222 78 39 chr5 183991939 183992169 -19093363 - L1M3 LINE L1 -669 5501 5263 478 306 159 61 chr5 183992198 183992906 -19092626 - L1M3 LINE L1 -913 5233 4391 3771 103 43 0 chr5 183992906 183993469 -19092063 - L1PA13 LINE L1 -1 6162 5576 478 306 159 61 chr5 183993469 183993792 -19091740 - L1M3 LINE L1 -1755 4391 4101 409 341 48 14 chr5 183993943 183994298 -19091234 - L1M3 LINE L1 -2208 3938 3572 665 275 24 0 chr5 183994437 183994604 -19090928 + MER63A DNA MER1_type 38 208 -2 418 281 134 6 chr5 183994604 183994752 -19090780 - MLT2E LTR ERVL -436 192 23 241 289 11 11 chr5 183994834 183994924 -19090608 - L1M3 LINE L1 -2718 3428 3339 21 36 0 0 chr5 183994953 183994981 -19090551 + AT_rich Low_complexity Low_complexity 1 28 0 1052 204 124 73 chr5 183995324 183995760 -19089772 + MER39 LTR ERV1 250 707 0 2137 97 17 0 chr5 183996171 183996459 -19089073 + AluSc SINE Alu 1 293 -16 336 271 48 48 chr5 183996460 183996708 -19088824 - L1MEd LINE L1 -4750 1560 1139 444 241 91 21 chr5 183996794 183997035 -19088497 - L1MEd LINE L1 -4958 1161 904 319 327 45 19 chr5 183997194 183997350 -19088182 - MIR SINE MIR -71 191 32 789 313 33 0 chr5 183998031 183998271 -19087261 - MIR SINE MIR -1 261 14 198 0 0 0 chr5 183998378 183998400 -19087132 + (ACATG)n Simple_repeat Simple_repeat 3 24 0 1640 155 82 23 chr5 183998607 183998961 -19086571 - THE1C LTR MaLR 0 375 1 313 327 32 39 chr5 183998987 183999064 -19086468 + MIR SINE MIR 52 128 -134 1413 124 90 98 chr5 183999064 183999410 -19086122 - MER61A LTR ERV1 0 343 1 313 327 32 39 chr5 183999410 183999488 -19086044 + MIR SINE MIR 128 206 -56 432 0 0 0 chr5 184000740 184000788 -19084744 + (TG)n Simple_repeat Simple_repeat 2 49 0 194 62 31 0 chr5 184001265 184001297 -19084235 + (CA)n Simple_repeat Simple_repeat 1 33 0 238 309 49 25 chr5 184001344 184001425 -19084107 - L2 LINE L2 -6 3266 3184 213 114 0 0 chr5 184001492 184001505 -19084027 + (GAA)n Simple_repeat Simple_repeat 2 14 -22 2685 26 7 3 chr5 184001505 184001815 -19083717 + AluY SINE Alu 1 311 0 213 114 0 0 chr5 184001815 184001836 -19083696 + (GAA)n Simple_repeat Simple_repeat 13 36 0 2056 132 14 0 chr5 184002803 184003099 -19082433 - AluSx SINE Alu -12 300 1 3699 179 133 27 chr5 184003108 184004401 -19081131 - L1MC3 LINE L1 -18 7977 6422 219 309 0 0 chr5 184004492 184004560 -19080972 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 2195 106 3 0 chr5 184005265 184005558 -19079974 + AluSx SINE Alu 1 294 -18 2112 127 7 3 chr5 184005565 184005864 -19079668 + AluSx SINE Alu 3 302 -10 780 185 119 0 chr5 184005891 184006042 -19079490 + FAM SINE Alu 2 170 -5 569 374 51 10 chr5 184006323 184006713 -19078819 + LTR33 LTR ERVL 11 416 -105 198 417 9 19 chr5 184006841 184006949 -19078583 + MIR SINE MIR 34 140 -68 212 286 174 0 chr5 184007098 184007196 -19078336 - MIR SINE MIR -81 181 67 211 304 0 0 chr5 184008122 184008178 -19077354 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 806 207 36 21 chr5 184008213 184008406 -19077126 - L1PA16 LINE L1 -9 6157 5962 852 235 0 0 chr5 184008406 184008568 -19076964 - AluJb SINE Alu -13 299 138 5729 159 21 13 chr5 184008570 184009046 -19076486 - L1PA16 LINE L1 -192 5974 5504 1876 173 7 0 chr5 184009046 184009346 -19076186 - AluSx SINE Alu -8 304 3 5729 159 21 13 chr5 184009346 184010754 -19074778 - L1PA16 LINE L1 -662 5504 4073 530 288 14 0 chr5 184011486 184011625 -19073907 + MIR SINE MIR 110 250 -12 29 47 0 0 chr5 184013588 184013631 -19071901 + AT_rich Low_complexity Low_complexity 1 43 0 6385 75 11 0 chr5 184014059 184014874 -19070658 - LTR12 LTR ERV1 0 826 3 2675 150 23 44 chr5 184015453 184016027 -19069505 - L1MA8 LINE L1 -7 6284 5723 6319 158 27 14 chr5 184016142 184017782 -19067750 - L1MA8 LINE L1 -566 5725 4063 241 227 0 136 chr5 184018144 184018276 -19067256 + LTR38B LTR ERV1 2 115 -495 346 265 159 46 chr5 184019821 184020101 -19065431 - L2 LINE L2 -247 3066 2770 424 204 36 66 chr5 184020247 184020414 -19065118 + MER104 DNA Tc2 19 180 0 2902 151 100 33 chr5 184020635 184020660 -19064872 + MER21A LTR ERV1 1 23 -908 2105 95 39 3 chr5 184020660 184020944 -19064588 - AluSc SINE Alu -15 294 1 2902 151 100 33 chr5 184020944 184021691 -19063841 + MER21A LTR ERV1 23 925 -6 374 300 43 29 chr5 184021940 184022080 -19063452 + L2 LINE L2 3169 3310 -3 965 258 95 23 chr5 184022582 184022888 -19062644 + MLT1G LTR MaLR 246 573 -17 33 25 0 0 chr5 184023086 184023126 -19062406 + AT_rich Low_complexity Low_complexity 1 40 0 442 304 106 83 chr5 184026305 184027086 -19058446 - L2 LINE L2 0 3272 2468 205 211 0 0 chr5 184027417 184027455 -19058077 + T-rich Low_complexity Low_complexity 1 38 0 243 299 78 0 chr5 184027968 184028045 -19057487 - MIR SINE MIR -89 173 91 274 288 0 0 chr5 184028343 184028402 -19057130 + MER91A DNA MER1_type 1 59 -137 453 226 29 10 chr5 184028719 184028821 -19056711 + MIR SINE MIR 125 228 -34 546 317 49 22 chr5 184029295 184029519 -19056013 - MLT1K LTR MaLR -357 231 2 196 288 45 0 chr5 184029735 184029801 -19055731 + MIR3 SINE MIR 130 198 -10 311 198 30 148 chr5 184030152 184030213 -19055319 + MLT1J1 LTR MaLR 247 314 -132 1992 203 89 9 chr5 184030213 184030661 -19054871 - MER66B LTR ERV1 -2 484 1 311 198 30 148 chr5 184030661 184030801 -19054731 + MLT1J1 LTR MaLR 314 424 -22 416 210 65 142 chr5 184030878 184031188 -19054344 + MER102a DNA MER1_type 44 329 -1 637 301 27 35 chr5 184032777 184033033 -19052499 - MIR SINE MIR -8 254 1 189 154 0 0 chr5 184033329 184033368 -19052164 + (GATTG)n Simple_repeat Simple_repeat 4 42 0 2650 120 30 26 chr5 184033436 184033862 -19051670 - MSTA LTR MaLR 0 428 1 892 235 168 33 chr5 184033965 184034424 -19051108 + LTR33A LTR ERVL 1 521 -2 569 187 136 120 chr5 184039933 184040180 -19045352 - L1MC5 LINE L1 -310 7651 7409 2204 98 7 0 chr5 184040180 184040466 -19045066 - AluSx SINE Alu -13 299 12 569 187 136 120 chr5 184040466 184040725 -19044807 - L1MC5 LINE L1 -552 7409 7137 * 26101 41 2 1 chr5 184040709 184044863 -19040669 - L1PA5 LINE L1 0 6154 2000 13329 73 2 9 chr5 184044864 184046719 -19038813 + L1PA5 LINE L1 165 2005 -4141 513 256 68 19 chr5 184046734 184047042 -19038490 - L1MCa LINE L1 -4836 1590 1268 643 213 84 51 chr5 184047059 184047393 -19038139 - L1MCa LINE L1 -5205 1402 1058 360 243 14 0 chr5 184047445 184047515 -19038017 + L2 LINE L2 3194 3264 -49 233 232 0 0 chr5 184047889 184047945 -19037587 - L1ME LINE L1 -446 5675 5620 25 0 0 0 chr5 184048553 184048578 -19036954 + AT_rich Low_complexity Low_complexity 1 25 0 551 200 36 0 chr5 184048668 184048778 -19036754 + MLT1A2 LTR MaLR 1 114 -260 2318 115 8 11 chr5 184048780 184049136 -19036396 - THE1A LTR MaLR 0 355 1 10943 107 2 2 chr5 184049141 184050715 -19034817 - THE1A-int LTR MaLR -6 1574 1 2538 99 8 8 chr5 184050715 184051070 -19034462 - THE1A LTR MaLR 0 355 1 904 230 32 40 chr5 184051070 184051322 -19034210 + MLT1A2 LTR MaLR 112 361 -13 1702 212 98 48 chr5 184051525 184052006 -19033526 - MLT1D LTR MaLR 0 505 1 1040 248 114 56 chr5 184052223 184052447 -19033085 - Charlie7 DNA MER1_type 0 2612 2403 524 29 0 0 chr5 184052447 184052515 -19033017 + L1PA2 LINE L1 6082 6149 -6 1040 248 114 56 chr5 184052515 184053366 -19032166 - Charlie7 DNA MER1_type -209 2403 1474 2440 166 30 0 chr5 184053545 184054010 -19031522 + L1MA4 LINE L1 5821 6299 -1 1023 223 0 0 chr5 184055685 184055873 -19029659 + MER5A DNA MER1_type 2 189 0 372 218 127 18 chr5 184055897 184056007 -19029525 - L2 LINE L2 -5 3308 3187 2264 107 0 10 chr5 184056615 184056923 -19028609 + AluSg SINE Alu 1 305 -5 186 103 0 0 chr5 184056991 184057020 -19028512 + (CA)n Simple_repeat Simple_repeat 2 30 0 390 249 82 68 chr5 184057058 184057471 -19028061 - L1MC4 LINE L1 -197 7845 7317 344 295 140 54 chr5 184057471 184057749 -19027783 - L2 LINE L2 -6 3307 3006 222 62 0 0 chr5 184059086 184059118 -19026414 + (TG)n Simple_repeat Simple_repeat 2 33 0 890 184 5 60 chr5 184059237 184059454 -19026078 + MER3 DNA MER1_type 1 205 -4 535 196 41 0 chr5 184060160 184060257 -19025275 - U6 snRNA snRNA -6 101 1 443 326 88 0 chr5 184060611 184060758 -19024774 - L2 LINE L2 -6 3266 3107 2434 78 0 0 chr5 184061026 184061335 -19024197 - AluY SINE Alu -2 309 1 2643 81 5 24 chr5 184061531 184061914 -19023618 - L1PB1 LINE L1 0 6151 5776 236 203 16 31 chr5 184061914 184061978 -19023554 + (TA)n Simple_repeat Simple_repeat 1 63 0 3522 125 24 28 chr5 184061978 184062826 -19022706 - L1PB1 LINE L1 -360 5791 4945 547 204 36 24 chr5 184063252 184063269 -19022263 - L1MA10 LINE L1 -2 6332 6316 2108 259 116 23 chr5 184063269 184064448 -19021084 - L1ME3 LINE L1 -7 6224 4942 3097 173 76 4 chr5 184064468 184065217 -19020315 - L1MB7 LINE L1 -206 5978 5175 1380 271 89 33 chr5 184065214 184065924 -19019608 - L1ME3 LINE L1 -4308 2088 1420 * 1755 153 11 7 chr5 184065924 184066206 -19019326 - AluJb SINE Alu -11 301 19 1380 271 89 33 chr5 184066206 184066365 -19019167 - L1ME3 LINE L1 -4976 1420 1271 2298 93 0 3 chr5 184066365 184066665 -19018867 - AluY SINE Alu -12 299 1 1380 271 89 33 chr5 184066665 184067574 -19017958 - L1ME3 LINE L1 -5125 1271 60 1926 236 62 43 chr5 184067664 184068228 -19017304 + MLT1E2 LTR MaLR 52 626 0 2103 129 3 0 chr5 184068516 184068818 -19016714 - AluSx SINE Alu -9 303 1 249 361 101 35 chr5 184071250 184071419 -19014113 + L3 LINE CR1 1271 1450 -127 370 293 19 9 chr5 184071725 184071831 -19013701 - MIR SINE MIR -111 151 45 1471 217 64 78 chr5 184072147 184072620 -19012912 + MLT1C LTR MaLR 6 465 -2 22 35 0 0 chr5 184072749 184072778 -19012754 + AT_rich Low_complexity Low_complexity 1 29 0 482 197 159 15 chr5 184073654 184073786 -19011746 - MER20 DNA MER1_type 0 219 69 315 150 0 0 chr5 184073786 184073846 -19011686 + (CA)n Simple_repeat Simple_repeat 2 61 0 424 131 0 0 chr5 184073846 184073907 -19011625 - MER20 DNA MER1_type -158 61 1 270 318 12 12 chr5 184074358 184074443 -19011089 - L2 LINE L2 -1 3312 3228 1308 220 32 0 chr5 184075014 184075327 -19010205 - MER33 DNA MER1_type -1 323 1 465 19 0 0 chr5 184076385 184076439 -19009093 + (TA)n Simple_repeat Simple_repeat 2 55 0 230 191 0 0 chr5 184076618 184076660 -19008872 - L1MC4 LINE L1 -1340 6702 6661 373 222 25 12 chr5 184076921 184077002 -19008530 + L2 LINE L2 3191 3272 0 218 286 18 0 chr5 184077479 184077535 -19007997 - L2 LINE L2 -82 3231 3175 477 0 0 0 chr5 184077796 184077849 -19007683 + (TG)n Simple_repeat Simple_repeat 2 54 0 272 261 63 78 chr5 184078849 184078991 -19006541 + MIR SINE MIR 111 250 -12 2005 118 38 0 chr5 184079158 184079447 -19006085 + AluSx SINE Alu 1 300 -12 343 370 46 50 chr5 184080099 184080160 -19005372 - L2 LINE L2 -4 3268 3208 2150 107 17 0 chr5 184080160 184080458 -19005074 - AluY SINE Alu -8 303 1 343 370 46 50 chr5 184080458 184080658 -19004874 - L2 LINE L2 -64 3208 3008 609 14 0 0 chr5 184080697 184080767 -19004765 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 184 326 58 0 chr5 184080832 184080918 -19004614 - L2 LINE L2 -661 2653 2563 19403 166 52 8 chr5 184081006 184082817 -19002715 - L1 LINE L1 -1370 6195 4465 2183 105 7 0 chr5 184082817 184083113 -19002419 - AluSg1 SINE Alu -3 306 9 19403 166 52 8 chr5 184083113 184087224 -18998308 - L1 LINE L1 -3100 4465 10 406 238 57 0 chr5 184087229 184087334 -18998198 - MER63 DNA MER1_type -819 111 1 1847 217 41 78 chr5 184087342 184087982 -18997550 - L1ME1 LINE L1 -125 6041 5426 285 311 61 7 chr5 184088039 184088187 -18997345 - L2 LINE L2 -1291 2023 1868 216 179 0 0 chr5 184088621 184088660 -18996872 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 225 211 0 0 chr5 184088731 184088783 -18996749 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 876 275 67 76 chr5 184088784 184089446 -18996086 + L2 LINE L2 2534 3190 -123 240 224 35 17 chr5 184091555 184091613 -18993919 - L1ME3A LINE L1 -77 6093 6035 664 265 39 39 chr5 184091728 184091988 -18993544 - L1ME3A LINE L1 -208 5962 5703 468 282 192 14 chr5 184092007 184092549 -18992983 - L1ME3A LINE L1 -572 5590 4938 * 831 256 89 28 chr5 184092534 184093155 -18992377 - L1ME3A LINE L1 -2696 3450 2768 * 1033 149 12 167 chr5 184093149 184093484 -18992048 - L1MC2 LINE L1 -1 6343 6061 675 219 28 11 chr5 184095873 184096051 -18989481 - L1MC1 LINE L1 -285 6048 5868 258 156 0 0 chr5 184096338 184096383 -18989149 + T-rich Low_complexity Low_complexity 1 45 0 961 164 33 51 chr5 184096472 184096606 -18988926 + MER2 DNA MER2_type 1 131 -214 1309 107 12 103 chr5 184096606 184096859 -18988673 - MER30 DNA MER1_type 0 230 1 961 164 33 51 chr5 184096859 184096938 -18988594 + MER2 DNA MER2_type 131 210 -135 883 221 52 12 chr5 184097105 184097354 -18988178 - MLT1D-int LTR MaLR -1107 264 6 1570 204 98 46 chr5 184097359 184097427 -18988105 - MLT1D LTR MaLR 0 505 442 1913 107 0 11 chr5 184097427 184097688 -18987844 + AluSg SINE Alu 35 292 -18 1570 204 98 46 chr5 184097688 184098099 -18987433 - MLT1D LTR MaLR -63 442 1 375 318 129 20 chr5 184099084 184099285 -18986247 + MIR SINE MIR 2 224 -38 286 352 138 9 chr5 184100250 184100460 -18985072 + MIR SINE MIR 1 237 -25 1948 259 21 16 chr5 184101389 184101956 -18983576 + MER74B LTR ERVL 53 622 0 3493 225 71 15 chr5 184102398 184103590 -18981942 - L1ME1 LINE L1 -6 6160 4847 890 175 32 11 chr5 184103590 184103779 -18981753 + L1MA9 LINE L1 6120 6312 0 3493 225 71 15 chr5 184103779 184104308 -18981224 - L1ME1 LINE L1 -1319 4847 4349 23 33 0 0 chr5 184104452 184104482 -18981050 + AT_rich Low_complexity Low_complexity 1 30 0 1543 253 57 38 chr5 184105937 184106171 -18979361 - MER114 LTR ERV 0 648 420 7615 21 9 0 chr5 184106171 184107274 -18978258 + L1PA3 LINE L1 5039 6153 -2 1815 146 17 26 chr5 184107277 184107579 -18977953 + AluJb SINE Alu 1 299 -13 1543 253 57 38 chr5 184107579 184107976 -18977556 - MER114 LTR ERV -229 419 1 26 0 0 0 chr5 184108033 184108059 -18977473 + AT_rich Low_complexity Low_complexity 1 26 0 230 152 0 0 chr5 184108416 184108449 -18977083 - MER94 DNA DNA -99 35 3 1797 111 11 4 chr5 184108626 184108905 -18976627 + L1PA13 LINE L1 5872 6152 -11 920 229 42 23 chr5 184109081 184109295 -18976237 + MER58A DNA MER1_type 1 218 -6 1940 141 23 13 chr5 184109696 184110002 -18975530 + AluSx SINE Alu 1 309 -3 1417 188 75 30 chr5 184110136 184110473 -18975059 + MLT1A1 LTR MaLR 1 442 -15 246 230 41 36 chr5 184110597 184110757 -18974775 - L1M1 LINE L1 -486 5817 5658 1841 222 65 6 chr5 184110789 184111262 -18974270 - L1M4 LINE L1 -346 5818 5288 2033 141 10 0 chr5 184111262 184111560 -18973972 - AluSq SINE Alu -12 301 1 1841 222 65 6 chr5 184111560 184111912 -18973620 - L1M4 LINE L1 -876 5288 4958 743 237 38 6 chr5 184112169 184112453 -18973079 - MLT1G LTR MaLR -196 359 3 245 302 48 90 chr5 184112495 184112806 -18972726 - MLT1H1-int LTR MaLR -42 1329 1032 388 302 49 37 chr5 184113444 184113689 -18971843 - MLT1H1-int LTR MaLR -830 541 294 1481 290 61 14 chr5 184113798 184114308 -18971224 - MLT1H1 LTR MaLR 0 555 22 16939 99 11 15 chr5 184115260 184117807 -18967725 - L1P LINE L1 -1424 4722 2186 356 194 14 0 chr5 184117805 184117877 -18967655 + L1P LINE L1 4718 4790 -1356 * 7027 54 11 1 chr5 184117882 184119253 -18966279 + L1PA7 LINE L1 4752 6150 -4 1218 186 210 62 chr5 184123305 184123691 -18961841 - LTR47A LTR ERVL 0 452 10 23 0 0 0 chr5 184124065 184124088 -18961444 + AT_rich Low_complexity Low_complexity 1 23 0 2159 131 0 0 chr5 184124192 184124489 -18961043 - AluSq SINE Alu -16 297 1 1398 232 9 114 chr5 184124563 184125107 -18960425 + L1MD3 LINE L1 6619 7143 -899 323 336 61 14 chr5 184125642 184125805 -18959727 - MIR SINE MIR -55 207 40 213 39 0 0 chr5 184126211 184126237 -18959295 + (A)n Simple_repeat Simple_repeat 1 26 0 264 30 0 0 chr5 184126455 184126488 -18959044 + (CA)n Simple_repeat Simple_repeat 1 33 0 223 49 49 0 chr5 184128140 184128181 -18957351 + (TA)n Simple_repeat Simple_repeat 2 44 0 354 250 29 64 chr5 184128341 184128545 -18956987 - HAL1 LINE L1 -5 2502 2306 551 167 29 0 chr5 184129180 184129282 -18956250 - MER103 DNA DNA 0 166 62 464 276 18 9 chr5 184130162 184130293 -18955239 + MIR SINE MIR 59 187 -60 439 298 37 84 chr5 184130437 184130628 -18954904 - MIR SINE MIR -62 146 7 278 309 41 24 chr5 184132582 184132705 -18952827 + MER5A DNA MER1_type 7 131 -58 916 166 17 11 chr5 184132898 184133073 -18952459 - L1MB1 LINE L1 0 6168 5993 293 246 0 0 chr5 184133790 184133855 -18951677 + GA-rich Low_complexity Low_complexity 5 69 0 388 337 67 6 chr5 184136471 184136649 -18948883 - MIR SINE MIR -6 256 68 7106 57 6 0 chr5 184136683 184138296 -18947236 + L1PA6 LINE L1 4536 6154 0 204 40 0 0 chr5 184139169 184139194 -18946338 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1107 160 0 37 chr5 184139194 184139382 -18946150 - AluSg/x SINE Alu -32 280 100 1723 148 40 33 chr5 184139390 184139694 -18945838 - AluJo SINE Alu -6 306 1 556 293 133 11 chr5 184139696 184139884 -18945648 + L2 LINE L2 2849 3059 -254 728 244 72 42 chr5 184139884 184139994 -18945538 - MLT1H1 LTR MaLR 0 555 450 1920 106 32 32 chr5 184139994 184140278 -18945254 - AluSx SINE Alu -18 294 11 728 244 72 42 chr5 184140278 184140429 -18945103 - MLT1H1 LTR MaLR -105 450 286 1414 222 65 119 chr5 184140435 184141008 -18944524 - MLT1F1 LTR MaLR 0 567 1 902 241 123 32 chr5 184141020 184141273 -18944259 - MLT1H1 LTR MaLR -279 276 1 378 261 15 60 chr5 184141365 184141499 -18944033 + L2 LINE L2 3171 3298 -15 536 292 38 14 chr5 184141780 184141989 -18943543 + L2 LINE L2 3095 3308 -5 260 211 13 0 chr5 184143360 184143436 -18942096 + (TA)n Simple_repeat Simple_repeat 1 77 0 216 0 0 0 chr5 184143848 184143872 -18941660 + (T)n Simple_repeat Simple_repeat 1 24 0 195 250 19 0 chr5 184144409 184144461 -18941071 + L2 LINE L2 3261 3313 0 320 259 98 0 chr5 184144624 184144736 -18940796 - MIR SINE MIR -76 186 64 252 309 10 10 chr5 184145268 184145365 -18940167 - MIR SINE MIR -5 257 161 376 309 166 32 chr5 184145547 184145890 -18939642 + L1ME3A LINE L1 1707 2095 -4445 32 57 0 0 chr5 184145907 184145960 -18939572 + AT_rich Low_complexity Low_complexity 1 53 0 1221 281 110 26 chr5 184146059 184147121 -18938411 + L1ME3A LINE L1 2373 3484 -3056 1841 266 114 26 chr5 184147135 184148299 -18937233 + L1ME3A LINE L1 4844 6182 -382 1608 127 106 68 chr5 184148299 184148621 -18936911 - MER1B DNA MER1_type 0 337 4 1841 266 114 26 chr5 184148621 184149040 -18936492 + L1ME3A LINE L1 6182 6563 -1 21 89 0 0 chr5 184150469 184150525 -18935007 + AT_rich Low_complexity Low_complexity 1 56 0 2300 92 0 0 chr5 184150529 184150824 -18934708 - AluSc SINE Alu -14 295 1 180 0 0 0 chr5 184152403 184152423 -18933109 + (TTA)n Simple_repeat Simple_repeat 2 21 0 3188 146 114 5 chr5 184152564 184153169 -18932363 + LTR51 LTR ERV1 1 671 0 252 235 111 74 chr5 184154755 184154836 -18930696 - L2 LINE L2 -21 3251 3168 234 91 0 0 chr5 184154868 184154901 -18930631 + (T)n Simple_repeat Simple_repeat 1 33 0 1877 158 0 3 chr5 184155187 184155478 -18930054 - AluSx SINE Alu -20 292 3 378 306 0 19 chr5 184156960 184157068 -18928464 + MER5A DNA MER1_type 2 107 -82 3014 145 48 12 chr5 184157070 184157655 -18927877 + MER4B LTR ERV1 9 779 0 181 139 139 0 chr5 184157655 184157691 -18927841 + MER5A DNA MER1_type 93 133 -56 2756 202 24 7 chr5 184158627 184159167 -18926365 - MER44D DNA MER2_type 0 605 2 1320 213 62 26 chr5 184159756 184160108 -18925424 - MLT1A1 LTR MaLR 0 365 1 285 29 0 0 chr5 184160784 184160818 -18924714 + (TG)n Simple_repeat Simple_repeat 2 35 0 338 324 101 53 chr5 184161477 184161832 -18923700 + MLT1K LTR MaLR 196 567 -21 12581 136 57 6 chr5 184162169 184164254 -18921278 + Tigger1 DNA MER2_type 1 2191 -227 3535 235 49 67 chr5 184164258 184164644 -18920888 + L1MCa LINE L1 768 1160 -5266 1847 138 11 11 chr5 184164644 184164948 -18920584 + AluSq SINE Alu 1 304 0 3535 235 49 67 chr5 184164948 184166230 -18919302 + L1MCa LINE L1 1160 2517 -3909 2232 70 52 3 chr5 184166230 184166517 -18919015 + AluSp SINE Alu 1 301 -12 3535 235 49 67 chr5 184166517 184166881 -18918651 + L1MCa LINE L1 2517 2886 -3540 2893 201 45 16 chr5 184166858 184167543 -18917989 + L1 LINE L1 4556 5260 -1166 * 292 98 0 39 chr5 184167539 184167590 -18917942 - L1PA4 LINE L1 -92 6063 6015 * 2967 26 0 0 chr5 184167588 184167931 -18917601 + L1PA4 LINE L1 5685 6027 -128 233 250 0 15 chr5 184167934 184168002 -18917530 + MLT1K LTR MaLR 518 584 -4 902 226 123 57 chr5 184168819 184169226 -18916306 + MLT1C LTR MaLR 34 467 0 22 0 0 0 chr5 184169239 184169261 -18916271 + AT_rich Low_complexity Low_complexity 1 22 0 563 140 49 12 chr5 184169279 184169443 -18916089 + (TA)n Simple_repeat Simple_repeat 1 170 0 444 372 82 21 chr5 184169782 184170048 -18915484 + L2 LINE L2 2763 3047 -266 1423 211 25 74 chr5 184170048 184170441 -18915091 + MLT1A2 LTR MaLR 1 374 0 444 372 82 21 chr5 184170441 184170476 -18915056 + L2 LINE L2 3047 3078 -235 625 253 81 106 chr5 184170482 184170863 -18914669 - MLT1H LTR MaLR -8 541 173 2671 110 0 0 chr5 184170863 184171227 -18914305 - THE1B LTR MaLR 0 364 1 625 253 81 106 chr5 184171227 184171316 -18914216 - MLT1H LTR MaLR -376 173 83 5587 134 11 10 chr5 184171540 184172444 -18913088 - L1PA13 LINE L1 -5 6158 5254 781 298 45 72 chr5 184173603 184174086 -18911446 - MLT1H LTR MaLR 0 549 80 436 265 59 7 chr5 184174138 184174274 -18911258 - MER58C DNA MER1_type -8 207 65 271 200 114 14 chr5 184174397 184174467 -18911065 + L2 LINE L2 3194 3270 -2 275 295 101 16 chr5 184174486 184174615 -18910917 - MLT1K LTR MaLR -149 439 300 942 104 0 0 chr5 184174877 184175002 -18910530 + AluSq/x SINE Alu 1 125 -188 225 0 0 0 chr5 184175023 184175048 -18910484 + (T)n Simple_repeat Simple_repeat 1 25 0 207 349 30 0 chr5 184177383 184177449 -18908083 + MIR3 SINE MIR 87 154 -54 254 309 118 9 chr5 184177452 184177562 -18907970 + MER102b DNA MER1_type 3 124 -217 268 318 56 9 chr5 184177773 184177880 -18907652 + MER102b DNA MER1_type 184 295 -46 252 324 0 0 chr5 184178012 184178086 -18907446 + MER102b DNA MER1_type 1254 1327 -3 252 200 0 0 chr5 184178656 184178711 -18906821 + (TA)n Simple_repeat Simple_repeat 2 56 0 190 160 0 60 chr5 184178853 184178903 -18906629 + MIR SINE MIR 104 150 -112 3821 152 42 37 chr5 184179283 184180064 -18905468 - LTR1 LTR ERV1 0 785 1 385 253 36 42 chr5 184180986 184181152 -18904380 + LTR43 LTR ERV1 180 344 -258 270 235 122 10 chr5 184181337 184181435 -18904097 - MER103 DNA DNA -46 120 12 246 304 49 0 chr5 184182966 184183068 -18902464 - MIR SINE MIR 0 262 156 681 261 65 22 chr5 184183071 184183301 -18902231 + MLT1J LTR MaLR 2 241 -270 1041 295 170 16 chr5 184183312 184183437 -18902095 - MLT1H LTR MaLR -20 529 425 2451 132 3 13 chr5 184183437 184183816 -18901716 + THE1C LTR MaLR 1 375 0 9756 113 47 36 chr5 184183816 184185378 -18900154 + THE1C-int LTR MaLR 1 1580 0 2627 106 3 5 chr5 184185378 184185754 -18899778 + THE1C LTR MaLR 1 375 0 1041 295 170 16 chr5 184185754 184186074 -18899458 - MLT1H LTR MaLR -123 426 13 258 346 84 9 chr5 184186083 184186190 -18899342 + MLT1J LTR MaLR 228 342 -169 242 100 0 0 chr5 184186242 184186282 -18899250 + MLT1J LTR MaLR 428 467 -44 416 305 18 37 chr5 184186294 184186458 -18899074 - MIR SINE MIR -84 178 18 2951 232 48 21 chr5 184188511 184189803 -18895729 + L1ME1 LINE L1 4841 6165 -1 279 0 0 0 chr5 184190131 184190162 -18895370 + (CA)n Simple_repeat Simple_repeat 2 32 0 322 340 110 48 chr5 184190179 184190597 -18894935 + L2 LINE L2 2829 3272 0 2388 143 73 0 chr5 184191920 184192319 -18893213 - MSTA LTR MaLR 0 428 1 590 256 139 41 chr5 184193536 184193802 -18891730 + MLT1D LTR MaLR 1 292 -213 209 353 49 0 chr5 184194118 184194220 -18891312 - MIR SINE MIR -135 127 21 387 0 0 0 chr5 184194509 184194552 -18890980 + (TA)n Simple_repeat Simple_repeat 2 44 0 2233 144 2 45 chr5 184194586 184195008 -18890524 - L1MA9 LINE L1 -158 6154 5751 203 384 0 0 chr5 184195232 184195305 -18890227 - MIR SINE MIR -143 119 47 249 108 0 0 chr5 184195511 184195548 -18889984 + (TA)n Simple_repeat Simple_repeat 1 37 0 2637 145 5 16 chr5 184195550 184195985 -18889547 + Tigger2a DNA MER2_type 5 434 0 222 222 0 0 chr5 184195985 184196039 -18889493 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2911 190 17 18 chr5 184196089 184196743 -18888789 - L1MB8 LINE L1 0 6178 5526 2136 111 40 3 chr5 184197354 184197594 -18887938 + AluSx SINE Alu 2 257 -55 243 0 0 0 chr5 184197594 184197621 -18887911 + (CACTG)n Simple_repeat Simple_repeat 1 27 0 2136 111 40 3 chr5 184197621 184197678 -18887854 + AluSx SINE Alu 257 310 -2 294 29 0 0 chr5 184198910 184198945 -18886587 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2167 143 74 13 chr5 184199008 184199387 -18886145 - LTR1B LTR ERV1 0 826 425 193 71 0 48 chr5 184199396 184199438 -18886094 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 5523 37 0 0 chr5 184199438 184200094 -18885438 - L1PA4 LINE L1 -24 6131 5476 2572 157 21 11 chr5 184200094 184200528 -18885004 - LTR1B LTR ERV1 -388 438 1 364 259 69 46 chr5 184200880 184201011 -18884521 + MER94 DNA DNA 1 134 0 539 271 106 65 chr5 184201063 184201143 -18884389 + L1ME3 LINE L1 5729 5804 -358 419 200 0 0 chr5 184201143 184201223 -18884309 - MADE1 DNA Mariner 0 80 1 539 271 106 65 chr5 184201223 184201471 -18884061 + L1ME3 LINE L1 5804 6075 -87 427 346 0 0 chr5 184203196 184203323 -18882209 + L3 LINE CR1 1431 1557 -20 219 69 0 0 chr5 184204101 184204130 -18881402 + (GA)n Simple_repeat Simple_repeat 2 30 0 1282 141 65 141 chr5 184204371 184204753 -18880779 + THE1C LTR MaLR 23 375 0 311 223 88 68 chr5 184205007 184205155 -18880377 - Charlie8 DNA MER1_type -2224 193 43 4519 236 66 47 chr5 184205218 184205603 -18879929 + Cheshire DNA MER1_type 27 403 -2017 1897 199 90 31 chr5 184205603 184206080 -18879452 + MLT1D LTR MaLR 1 505 0 4519 236 66 47 chr5 184206080 184207195 -18878337 + Cheshire DNA MER1_type 403 1555 -865 23354 148 13 79 chr5 184207203 184212193 -18873339 + L1PA8 LINE L1 5 4667 -1479 6234 84 1 0 chr5 184212188 184213037 -18872495 + L1PA8 LINE L1 5318 6167 -5 * 528 187 0 0 chr5 184213039 184213146 -18872386 + Cheshire DNA MER1_type 1552 1658 -762 2736 187 51 67 chr5 184213176 184213259 -18872273 + Cheshire DNA MER1_type 1648 1731 -689 1349 212 14 38 chr5 184213259 184213547 -18871985 + AluJb SINE Alu 1 281 -31 2736 187 51 67 chr5 184213547 184214092 -18871440 + Cheshire DNA MER1_type 1731 2265 -155 2217 119 0 10 chr5 184214092 184214403 -18871129 - AluSx SINE Alu -4 308 1 2736 187 51 67 chr5 184214403 184214520 -18871012 + Cheshire DNA MER1_type 2265 2382 -38 12622 131 25 11 chr5 184214521 184215037 -18870495 + Tigger1 DNA MER2_type 2 509 -1909 1320 94 0 38 chr5 184215037 184215249 -18870283 + L1MA3 LINE L1 6102 6305 0 12622 131 25 11 chr5 184215249 184216737 -18868795 + Tigger1 DNA MER2_type 509 2034 -384 504 206 10 0 chr5 184216772 184216869 -18868663 + LTR16C LTR ERVL 367 464 -27 2255 248 14 0 chr5 184216939 184217528 -18868004 + L1 LINE L1 4359 4955 -1191 610 143 0 48 chr5 184217536 184217662 -18867870 - L1M LINE L1 -772 5408 5289 1136 183 29 73 chr5 184217662 184217935 -18867597 - AluJo SINE Alu -26 286 26 321 291 5 28 chr5 184218099 184218250 -18867282 + AluJ/FRAM SINE Alu 214 302 0 25 31 0 0 chr5 184220364 184220396 -18865136 + AT_rich Low_complexity Low_complexity 1 32 0 258 132 0 0 chr5 184220636 184220689 -18864843 + (A)n Simple_repeat Simple_repeat 1 53 0 21 0 0 0 chr5 184223770 184223791 -18861741 + AT_rich Low_complexity Low_complexity 1 21 0 504 184 0 0 chr5 184224238 184224341 -18861191 + (TG)n Simple_repeat Simple_repeat 2 104 0 385 302 22 0 chr5 184226220 184226359 -18859173 + MIR SINE MIR 35 176 -86 2086 102 65 7 chr5 184226740 184227034 -18858498 - AluSp SINE Alu 0 313 3 977 241 32 4 chr5 184227053 184227302 -18858230 - L1MB5 LINE L1 -160 6014 5759 676 307 35 28 chr5 184227334 184227621 -18857911 + L2 LINE L2 3015 3303 -10 32 0 0 0 chr5 184227807 184227839 -18857693 + AT_rich Low_complexity Low_complexity 1 32 0 418 316 46 51 chr5 184228513 184228709 -18856823 - MIR SINE MIR -34 228 34 465 241 74 19 chr5 184228710 184228872 -18856660 - L1MC4 LINE L1 -72 7970 7800 284 279 60 40 chr5 184228930 184229442 -18856090 - L1MC4 LINE L1 -413 7629 7163 404 123 55 0 chr5 184229469 184229542 -18855990 + MADE1 DNA Mariner 1 77 -3 1740 171 44 34 chr5 184230052 184230212 -18855320 + MLT1B LTR MaLR 1 158 -232 2365 75 0 3 chr5 184230212 184230507 -18855025 + AluSg SINE Alu 1 294 -16 1740 171 44 34 chr5 184230507 184230731 -18854801 + MLT1B LTR MaLR 158 389 -1 330 283 181 35 chr5 184231192 184231645 -18853887 - L1MEd LINE L1 -4943 1176 658 255 317 153 37 chr5 184231650 184231918 -18853614 - L1MEd LINE L1 -5492 627 329 512 206 52 0 chr5 184231942 184232097 -18853435 - L1M4 LINE L1 -986 5160 4998 291 283 72 72 chr5 184232082 184232319 -18853213 - L1MEd LINE L1 -5837 282 46 * 453 254 15 33 chr5 184232593 184232759 -18852773 + MER63 DNA MER1_type 677 1060 0 276 200 43 29 chr5 184232911 184232981 -18852551 - MER58 DNA MER1_type -15 2405 130 235 205 39 0 chr5 184232991 184233069 -18852463 + CT-rich Low_complexity Low_complexity 1 81 0 286 233 221 0 chr5 184233069 184233155 -18852377 - MER58 DNA MER1_type -236 105 1 224 136 51 34 chr5 184234559 184234618 -18850914 + T-rich Low_complexity Low_complexity 6 65 0 223 195 0 0 chr5 184235626 184235667 -18849865 + A-rich Low_complexity Low_complexity 1 41 0 381 328 33 24 chr5 184236151 184236366 -18849166 - MIR SINE MIR -8 254 37 904 261 57 92 chr5 184236510 184237000 -18848532 - MLT1G LTR MaLR -7 583 111 230 158 0 102 chr5 184237480 184237725 -18847807 + AluJo SINE Alu 1 290 -12 208 133 53 13 chr5 184237751 184237826 -18847706 + (TA)n Simple_repeat Simple_repeat 2 79 0 29 70 0 0 chr5 184237838 184237895 -18847637 + AT_rich Low_complexity Low_complexity 1 57 0 2543 110 25 11 chr5 184239213 184239651 -18845881 - L1MA4A LINE L1 -625 5678 5234 2939 139 7 3 chr5 184239653 184240205 -18845327 + L1MA4A LINE L1 5694 6298 -5 2804 6 0 19 chr5 184240291 184240607 -18844925 + AluYa5 SINE Alu 1 310 -1 279 0 0 0 chr5 184240828 184240859 -18844673 + (CA)n Simple_repeat Simple_repeat 2 32 0 2829 76 13 20 chr5 184240868 184241265 -18844267 - L1PA7 LINE L1 -14 6140 5747 270 217 54 22 chr5 184242631 184242723 -18842809 - MER103 DNA DNA -2 164 70 27 81 0 0 chr5 184242729 184242791 -18842741 + AT_rich Low_complexity Low_complexity 1 62 0 183 129 0 0 chr5 184242896 184242927 -18842605 + (GA)n Simple_repeat Simple_repeat 1 31 0 380 215 124 29 chr5 184243092 184243215 -18842317 - MIR SINE MIR -42 166 31 828 223 30 15 chr5 184244106 184244371 -18841161 + MER33 DNA MER1_type 56 324 0 25 51 0 0 chr5 184244376 184244415 -18841117 + AT_rich Low_complexity Low_complexity 1 39 0 2108 112 0 30 chr5 184244670 184244974 -18840558 + AluSq SINE Alu 1 295 -18 365 235 52 0 chr5 184244992 184245107 -18840425 + L1M4 LINE L1 1309 1429 -5113 2172 126 12 3 chr5 184245213 184245547 -18839985 - L1PA15 LINE L1 -65 6100 5764 1633 121 26 15 chr5 184245543 184245815 -18839717 + L1PA15 LINE L1 5482 5756 -409 * 211 130 43 33 chr5 184246011 184246103 -18839429 + (TTATA)n Simple_repeat Simple_repeat 1 93 0 234 0 0 0 chr5 184246197 184246223 -18839309 + (TG)n Simple_repeat Simple_repeat 2 27 0 2444 66 0 7 chr5 184246452 184246755 -18838777 - AluY SINE Alu -10 301 1 1308 148 29 4 chr5 184246757 184247000 -18838532 + MER6 DNA MER2_type 617 865 0 577 231 67 39 chr5 184247003 184247211 -18838321 - L1MC/D LINE L1 -2075 5733 5520 1793 92 8 0 chr5 184247344 184247583 -18837949 - AluSp SINE Alu -72 241 1 249 159 0 0 chr5 184248829 184248873 -18836659 + A-rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr5 184249638 184249670 -18835862 + AT_rich Low_complexity Low_complexity 1 32 0 220 290 14 0 chr5 184249843 184249912 -18835620 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 366 80 0 0 chr5 184249942 184249992 -18835540 + (T)n Simple_repeat Simple_repeat 1 50 0 234 250 47 0 chr5 184250117 184250181 -18835351 + GA-rich Low_complexity Low_complexity 3 69 0 747 279 126 54 chr5 184250345 184250959 -18834573 - L2 LINE L2 -35 3278 2624 198 103 0 0 chr5 184251625 184251654 -18833878 + (T)n Simple_repeat Simple_repeat 1 29 0 1803 160 25 44 chr5 184252367 184252729 -18832803 + THE1A LTR MaLR 1 355 0 10264 94 11 95 chr5 184252731 184254453 -18831079 + THE1A-int LTR MaLR 3 1580 0 2138 132 26 9 chr5 184254453 184254802 -18830730 + THE1A LTR MaLR 1 355 0 206 203 0 16 chr5 184254885 184254949 -18830583 + (TA)n Simple_repeat Simple_repeat 2 64 0 1635 175 58 32 chr5 184256394 184256742 -18828790 + MLT1A1 LTR MaLR 9 365 0 2520 94 0 0 chr5 184256953 184257305 -18828227 - L1P LINE L1 -966 5180 4829 3133 161 51 6 chr5 184257459 184257980 -18827552 - L1PA15 LINE L1 -320 5845 5349 183 100 0 0 chr5 184257980 184258010 -18827522 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3133 161 51 6 chr5 184258010 184258450 -18827082 - L1PA15 LINE L1 -816 5349 4840 378 314 86 16 chr5 184258465 184258905 -18826627 - L1MEd LINE L1 -3379 2750 2280 859 179 7 0 chr5 184258965 184259116 -18826416 - MLT2B2 LTR ERVL -363 152 1 302 263 75 102 chr5 184259232 184259487 -18826045 - L1MEd LINE L1 -5260 859 612 846 167 44 106 chr5 184260521 184260748 -18824784 - MER20 DNA MER1_type -3 216 4 252 122 0 0 chr5 184260813 184260854 -18824678 + (A)n Simple_repeat Simple_repeat 1 41 0 180 366 0 0 chr5 184261013 184261084 -18824448 - L2 LINE L2 0 3272 3202 701 250 28 11 chr5 184261141 184261321 -18824211 + MIR SINE MIR 9 191 -71 26 82 0 0 chr5 184261485 184261546 -18823986 + AT_rich Low_complexity Low_complexity 1 61 0 2334 105 0 0 chr5 184261589 184261895 -18823637 + AluSx SINE Alu 1 306 -6 237 185 0 0 chr5 184262456 184262510 -18823022 + L1MC4 LINE L1 6650 6703 -1339 * 300 271 0 42 chr5 184262506 184262602 -18822930 + L1MC4 LINE L1 6614 6705 -1337 * 505 174 21 16 chr5 184262513 184262698 -18822834 + (TATG)n Simple_repeat Simple_repeat 1 185 0 359 349 94 23 chr5 184263651 184264121 -18821411 + HAL1b LINE L1 93 595 -753 597 257 49 31 chr5 184264170 184264396 -18821136 + HAL1b LINE L1 666 895 -453 22 56 0 0 chr5 184264562 184264598 -18820934 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr5 184265284 184265319 -18820213 + AT_rich Low_complexity Low_complexity 1 35 0 331 232 83 60 chr5 184265343 184265511 -18820021 + L1M4 LINE L1 2788 2959 -3187 393 22 0 0 chr5 184266116 184266162 -18819370 + (CA)n Simple_repeat Simple_repeat 2 47 0 352 234 0 13 chr5 184266397 184266474 -18819058 - MER94 DNA DNA -15 119 44 365 306 21 35 chr5 184266591 184266735 -18818797 - MER117 DNA MER1_type -4 193 52 975 258 11 8 chr5 184267079 184267347 -18818185 - AluSx SINE Alu -16 296 28 312 323 146 15 chr5 184267474 184267734 -18817798 - HAL1 LINE L1 -443 2064 1771 2259 289 124 45 chr5 184267822 184269338 -18816194 - HAL1 LINE L1 -860 1647 13 850 222 6 6 chr5 184270862 184271038 -18814494 - MER5B DNA MER1_type 0 178 3 378 259 177 43 chr5 184271046 184271278 -18814254 + L3 LINE CR1 1176 1438 -139 511 274 192 5 chr5 184271394 184271602 -18813930 - MIR SINE MIR 0 262 16 1199 244 27 12 chr5 184272714 184273042 -18812490 - MER58B DNA MER1_type -7 334 2 288 291 173 0 chr5 184273256 184273366 -18812166 + MIR SINE MIR 29 157 -105 724 324 24 4 chr5 184273447 184273694 -18811838 - MIR SINE MIR 0 262 11 363 322 83 29 chr5 184273812 184274017 -18811515 + MIR SINE MIR 19 234 -28 21 0 0 0 chr5 184274120 184274141 -18811391 + AT_rich Low_complexity Low_complexity 1 21 0 426 306 81 12 chr5 184274695 184274868 -18810664 - MIR3 SINE MIR -8 200 16 2099 93 3 28 chr5 184275292 184275614 -18809918 + AluSp SINE Alu 1 315 0 216 265 12 24 chr5 184278398 184278481 -18807051 + MIR SINE MIR 143 224 -38 1014 102 0 0 chr5 184278926 184279053 -18806479 + AluSq/x SINE Alu 3 129 -183 183 323 32 0 chr5 184279203 184279265 -18806267 - L2 LINE L2 -399 2915 2852 773 194 36 22 chr5 184280692 184280914 -18804618 + L1MB4 LINE L1 5956 6180 0 356 155 24 0 chr5 184280926 184281010 -18804522 + L1MB8 LINE L1 6093 6178 0 957 269 96 30 chr5 184281016 184281454 -18804078 - MLT1C LTR MaLR 0 467 1 532 301 49 16 chr5 184281458 184281641 -18803891 - MIR SINE MIR -8 254 66 455 316 108 26 chr5 184283051 184283282 -18802250 - MIR SINE MIR 0 262 13 201 350 41 21 chr5 184284098 184284195 -18801337 + L2 LINE L2 3215 3313 0 422 296 72 0 chr5 184284227 184284379 -18801153 + MIR SINE MIR 48 210 -52 1853 154 13 10 chr5 184284402 184284701 -18800831 - AluJb SINE Alu -12 300 1 989 223 10 15 chr5 184285207 184285409 -18800123 - MER20 DNA MER1_type 0 219 19 231 140 0 20 chr5 184286820 184286870 -18798662 + (TA)n Simple_repeat Simple_repeat 2 50 0 204 67 0 0 chr5 184287883 184287913 -18797619 + (TG)n Simple_repeat Simple_repeat 2 31 0 339 306 8 41 chr5 184288007 184288128 -18797404 - MIR SINE MIR -44 218 102 22 56 0 0 chr5 184288130 184288166 -18797366 + AT_rich Low_complexity Low_complexity 1 36 0 473 207 121 21 chr5 184288183 184288323 -18797209 - MIR SINE MIR -28 234 81 202 229 0 0 chr5 184288454 184288502 -18797030 + A-rich Low_complexity Low_complexity 1 48 0 2244 113 0 0 chr5 184289180 184289481 -18796051 + AluSq SINE Alu 1 301 -12 25 75 0 0 chr5 184289700 184289753 -18795779 + AT_rich Low_complexity Low_complexity 1 53 0 1742 132 120 20 chr5 184290090 184290431 -18795101 + THE1C LTR MaLR 1 375 0 2005 237 45 30 chr5 184290759 184291295 -18794237 + MER77 LTR ERV1 56 599 -6 320 306 73 6 chr5 184291361 184291471 -18794061 + MIR SINE MIR 63 175 -82 905 229 48 0 chr5 184291476 184291707 -18793825 - MER96B DNA MER1_type? -174 243 2 1815 175 13 3 chr5 184292093 184292402 -18793130 - AluJo SINE Alu 0 312 1 452 305 231 48 chr5 184294313 184295139 -18790393 + L2 LINE L2 1911 2887 -427 285 359 96 19 chr5 184295260 184295469 -18790063 + MIR SINE MIR 2 226 -36 1950 136 149 16 chr5 184295498 184295874 -18789658 + MSTA LTR MaLR 1 426 -2 9462 148 6 43 chr5 184295878 184297517 -18788015 + MSTA-int LTR MaLR 3 1580 0 1625 138 176 37 chr5 184297517 184297893 -18787639 + MSTA LTR MaLR 1 428 0 22 35 0 0 chr5 184297921 184297950 -18787582 + AT_rich Low_complexity Low_complexity 1 29 0 183 184 0 0 chr5 184299414 184299452 -18786080 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr5 184301758 184301781 -18783751 + AT_rich Low_complexity Low_complexity 1 23 0 307 309 103 16 chr5 184302000 184302379 -18783153 + L1MC/D LINE L1 4061 4472 -1674 1064 263 19 34 chr5 184302501 184302821 -18782711 + L1MDa LINE L1 34 348 -6192 1603 182 32 38 chr5 184302919 184303232 -18782300 + AluJo SINE Alu 2 312 0 236 100 25 0 chr5 184303234 184303274 -18782258 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 364 330 35 0 chr5 184303281 184303396 -18782136 + L1MC/D LINE L1 5521 5639 -2169 345 203 0 0 chr5 184303453 184303512 -18782020 + MLT2B1 LTR ERVL 1 59 -461 587 235 45 56 chr5 184303682 184303861 -18781671 + MER8 DNA MER2_type 1 177 -62 391 190 0 13 chr5 184303894 184303973 -18781559 - Tigger2a DNA MER2_type -356 78 1 1028 257 56 34 chr5 184304009 184304612 -18780920 + L1MDa LINE L1 891 1548 -4982 36 40 0 0 chr5 184304635 184304685 -18780847 + AT_rich Low_complexity Low_complexity 1 50 0 2464 71 3 0 chr5 184304780 184305090 -18780442 + AluY SINE Alu 1 311 0 770 277 73 57 chr5 184305120 184306006 -18779526 + L1MDa LINE L1 1740 2687 -4034 381 324 88 60 chr5 184307822 184307922 -18777610 + L2 LINE L2 2866 2962 -351 2429 72 0 10 chr5 184307922 184308226 -18777306 - AluY SINE Alu -10 301 1 381 324 88 60 chr5 184308226 184308557 -18776975 + L2 LINE L2 2962 3309 -4 911 264 49 40 chr5 184308670 184309075 -18776457 - MLT1I LTR MaLR 0 409 1 201 400 17 9 chr5 184309637 184309752 -18775780 - MIR SINE MIR -146 116 1 396 0 0 0 chr5 184310246 184310290 -18775242 + (TG)n Simple_repeat Simple_repeat 2 45 0 206 250 0 0 chr5 184310292 184310344 -18775188 + (TA)n Simple_repeat Simple_repeat 1 52 0 1441 122 0 0 chr5 184310690 184310895 -18774637 + AluSq SINE Alu 84 288 -25 218 281 61 0 chr5 184310896 184310978 -18774554 - MIR SINE MIR 0 262 176 2207 163 29 19 chr5 184311051 184311468 -18774064 - MER61C LTR ERV1 0 434 14 264 220 0 0 chr5 184311435 184311485 -18774047 - LTR28 LTR ERV1 -958 62 13 * 856 196 86 144 chr5 184311476 184311873 -18773659 - MLT1A2 LTR MaLR -16 374 1 353 303 18 0 chr5 184311873 184311982 -18773550 - MIR SINE MIR -92 170 60 6615 78 5 0 chr5 184312358 184313310 -18772222 - L1PA7 LINE L1 0 6154 5200 7887 91 10 11 chr5 184313310 184314446 -18771086 + L1P LINE L1 3468 4602 -1544 1237 225 129 94 chr5 184314726 184315278 -18770254 - MLT1E1 LTR MaLR -28 626 56 837 279 140 39 chr5 184315307 184315868 -18769664 - L2 LINE L2 -255 3058 2447 1702 226 33 9 chr5 184315972 184316397 -18769135 - L1MC3 LINE L1 0 7785 7351 1127 206 59 15 chr5 184316479 184316751 -18768781 - L1MC3 LINE L1 -809 6976 6693 234 259 88 47 chr5 184316758 184316928 -18768604 + L1MC/D LINE L1 5709 5885 -1923 30 0 0 0 chr5 184318516 184318546 -18766986 + AT_rich Low_complexity Low_complexity 1 30 0 508 247 82 74 chr5 184319134 184319377 -18766155 + MIR SINE MIR 13 257 -5 2271 157 70 12 chr5 184319430 184319832 -18765700 - MSTB LTR MaLR 0 426 2 561 219 93 13 chr5 184320283 184320434 -18765098 - MLT1A1 LTR MaLR -202 163 1 1639 196 0 7 chr5 184320667 184320958 -18764574 - AluJo SINE Alu -23 289 1 210 254 0 0 chr5 184321041 184321108 -18764424 + (TA)n Simple_repeat Simple_repeat 2 68 0 27 0 0 0 chr5 184321170 184321197 -18764335 + AT_rich Low_complexity Low_complexity 1 27 0 2303 97 3 0 chr5 184321350 184321648 -18763884 - AluSx SINE Alu -12 300 2 579 289 16 31 chr5 184322184 184322424 -18763108 + MLT1K LTR MaLR 1 242 -307 2368 78 0 13 chr5 184322491 184322799 -18762733 + AluY SINE Alu 1 304 -7 2340 89 0 0 chr5 184323565 184323868 -18761664 - AluSq SINE Alu -10 303 1 2164 118 3 0 chr5 184324119 184324415 -18761117 + AluSq SINE Alu 2 298 -15 627 252 74 57 chr5 184325263 184325561 -18759971 + MLT1K LTR MaLR 267 569 -19 504 88 14 6 chr5 184326113 184326195 -18759337 + THE1C LTR MaLR 305 374 -1 433 232 67 73 chr5 184327500 184327664 -18757868 - MLT1J2 LTR MaLR -287 163 1 2237 154 22 0 chr5 184328204 184328560 -18756972 - THE1B LTR MaLR 0 364 1 24 32 0 0 chr5 184329225 184329256 -18756276 + AT_rich Low_complexity Low_complexity 1 31 0 315 271 0 0 chr5 184329470 184329540 -18755992 - AluJ/FRAM SINE Alu -12 290 221 25 65 0 0 chr5 184330161 184330207 -18755325 + AT_rich Low_complexity Low_complexity 1 46 0 1889 228 31 74 chr5 184331039 184331618 -18753914 - MLT2B3 LTR ERVL 0 554 1 21 0 0 0 chr5 184331793 184331814 -18753718 + AT_rich Low_complexity Low_complexity 1 21 0 562 366 57 4 chr5 184332247 184332474 -18753058 - MIR SINE MIR -18 244 6 217 254 17 0 chr5 184332666 184332725 -18752807 - MIR SINE MIR -6 256 197 201 259 185 0 chr5 184332792 184332873 -18752659 - L2 LINE L2 -499 2815 2720 1772 117 133 13 chr5 184333717 184334017 -18751515 + MER1B DNA MER1_type 2 337 0 581 272 86 0 chr5 184334471 184334633 -18750899 + MIR SINE MIR 63 238 -24 355 281 0 0 chr5 184335214 184335303 -18750229 + MER103 DNA DNA 11 99 -67 198 254 0 79 chr5 184336181 184336244 -18749288 - MIR SINE MIR -6 256 199 2167 105 0 0 chr5 184336283 184336589 -18748943 - L1PA14 LINE L1 -4 6157 5852 240 350 21 0 chr5 184336630 184336727 -18748805 - MIR SINE MIR -161 101 3 2845 0 0 19 chr5 184337221 184337538 -18747994 + AluYa5 SINE Alu 1 311 0 378 42 0 0 chr5 184338289 184338337 -18747195 + (TC)n Simple_repeat Simple_repeat 1 48 0 1814 163 43 38 chr5 184338372 184338741 -18746791 + THE1C LTR MaLR 5 375 0 291 71 0 0 chr5 184339453 184339495 -18746037 + (T)n Simple_repeat Simple_repeat 1 42 0 3184 207 27 10 chr5 184339743 184340447 -18745085 + L1MA9 LINE L1 5559 6274 -38 2280 107 0 0 chr5 184341885 184342184 -18743348 + AluSg1 SINE Alu 3 301 -8 1255 157 29 139 chr5 184344003 184344347 -18741185 - AluYb8 SINE Alu -1 307 2 635 306 38 5 chr5 184345704 184345913 -18739619 - MIR SINE MIR -8 254 39 1855 157 7 30 chr5 184345973 184346278 -18739254 + AluJo SINE Alu 1 298 -14 571 204 105 66 chr5 184346869 184347050 -18738482 + MER5A DNA MER1_type 2 189 0 24 0 0 0 chr5 184347416 184347440 -18738092 + AT_rich Low_complexity Low_complexity 1 24 0 346 255 19 115 chr5 184348094 184348251 -18737281 + MLT1K LTR MaLR 138 279 -309 817 284 19 50 chr5 184348415 184348732 -18736800 + LTR16C LTR ERVL 165 471 -20 261 98 0 0 chr5 184350405 184350446 -18735086 + (CA)n Simple_repeat Simple_repeat 2 42 0 893 63 87 0 chr5 184350481 184350608 -18734924 + MER85 DNA T2_type 2 139 0 1573 154 32 95 chr5 184350762 184351132 -18734400 + MER7A DNA MER2_type 2 346 0 1965 127 20 3 chr5 184352173 184352473 -18733059 - AluSc SINE Alu -4 305 1 208 282 56 14 chr5 184352658 184352729 -18732803 - MIR SINE MIR -82 180 107 601 299 84 32 chr5 184352848 184353132 -18732400 - MLT1I LTR MaLR -29 380 82 1694 183 17 79 chr5 184354499 184354915 -18730617 - MLT1B LTR MaLR 0 390 1 373 228 22 54 chr5 184355464 184355556 -18729976 - L2 LINE L2 0 3313 3225 22 0 0 0 chr5 184355572 184355594 -18729938 + AT_rich Low_complexity Low_complexity 1 22 0 1915 115 59 54 chr5 184355714 184356087 -18729445 - THE1C LTR MaLR 0 375 1 2135 138 0 0 chr5 184356580 184356876 -18728656 - AluSx SINE Alu -15 297 2 2631 222 66 40 chr5 184357294 184357365 -18728167 + L1ME1 LINE L1 4298 4366 -1800 2332 78 3 0 chr5 184357365 184357661 -18727871 - AluY SINE Alu -14 297 1 2631 222 66 40 chr5 184357661 184359266 -18726266 + L1ME1 LINE L1 4366 6010 -156 340 203 0 0 chr5 184359281 184359350 -18726182 + L1MA10 LINE L1 6256 6324 -10 208 145 16 145 chr5 184359491 184359553 -18725979 - L2 LINE L2 0 3272 3219 265 155 86 0 chr5 184359657 184359715 -18725817 + L1PA16 LINE L1 6102 6164 -2 22 0 0 0 chr5 184359776 184359798 -18725734 + AT_rich Low_complexity Low_complexity 1 22 0 10280 177 18 12 chr5 184359819 184363003 -18722529 - L1PB1 LINE L1 -1 6150 2951 189 107 0 0 chr5 184363408 184363436 -18722096 + (CAA)n Simple_repeat Simple_repeat 2 29 0 466 366 52 12 chr5 184363626 184363877 -18721655 + L3 LINE CR1 235 495 -1082 21 36 0 0 chr5 184364089 184364117 -18721415 + AT_rich Low_complexity Low_complexity 1 28 0 1925 110 0 7 chr5 184364996 184365269 -18720263 - AluSc SINE Alu -38 271 1 21 36 0 0 chr5 184365444 184365472 -18720060 + AT_rich Low_complexity Low_complexity 1 28 0 254 300 93 25 chr5 184365581 184365840 -18719692 + L3 LINE CR1 564 893 -684 471 351 79 19 chr5 184365922 184366289 -18719243 - MLT1K LTR MaLR -12 576 188 273 387 21 60 chr5 184366419 184366703 -18718829 + L3 LINE CR1 1087 1359 -218 340 272 12 12 chr5 184368436 184368517 -18717015 + MIR SINE MIR 50 130 -132 442 180 27 64 chr5 184368522 184368574 -18716958 - L1ME1 LINE L1 0 6334 6282 1692 162 0 49 chr5 184368574 184368901 -18716631 + AluJb SINE Alu 2 312 0 442 180 27 64 chr5 184368901 184368974 -18716558 - L1ME1 LINE L1 -52 6282 6056 1341 241 64 42 chr5 184368976 184369456 -18716076 - L1M4 LINE L1 -1318 4828 4331 2101 133 0 0 chr5 184369456 184369749 -18715783 - AluSg SINE Alu -16 294 2 1341 241 64 42 chr5 184369749 184369858 -18715674 - L1M4 LINE L1 -1815 4331 4226 1119 272 40 44 chr5 184369935 184370483 -18715049 - L1M4 LINE L1 -2190 3956 3411 2385 182 19 5 chr5 184370486 184370915 -18714617 + MSTB2 LTR MaLR 23 457 0 390 276 33 53 chr5 184370924 184371076 -18714456 + MIR SINE MIR 112 260 -2 824 278 115 48 chr5 184371967 184372445 -18713087 + MLT1J LTR MaLR 1 510 -1 279 0 0 0 chr5 184373274 184373305 -18712227 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 26 0 0 0 chr5 184374098 184374124 -18711408 + AT_rich Low_complexity Low_complexity 1 26 0 314 263 44 35 chr5 184378854 184378968 -18706564 + MIR SINE MIR 117 231 -31 340 65 0 0 chr5 184379868 184379914 -18705618 - MADE1 DNA Mariner -34 46 1 565 306 171 26 chr5 184380515 184380901 -18704631 - MLT1H LTR MaLR 0 549 108 30 0 0 0 chr5 184381145 184381175 -18704357 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr5 184381483 184381525 -18704007 + AT_rich Low_complexity Low_complexity 1 42 0 347 357 30 15 chr5 184381591 184381790 -18703742 + MIR SINE MIR 61 262 0 1177 403 14 19 chr5 184382644 184383009 -18702523 - MLT1A1 LTR MaLR 0 365 3 233 352 34 0 chr5 184383368 184383456 -18702076 + L2 LINE L2 2872 2962 -310 229 182 45 0 chr5 184383607 184383651 -18701881 + L2 LINE L2 3268 3313 0 656 180 8 0 chr5 184385487 184385615 -18699917 + L1PA13 LINE L1 6028 6156 -7 514 331 53 12 chr5 184386779 184387024 -18698508 - L3 LINE CR1 0 1577 1323 409 298 149 23 chr5 184387479 184387694 -18697838 - L2 LINE L2 -49 3264 3023 184 226 140 43 chr5 184387668 184387761 -18697771 - L3b LINE CR1 -126 1457 1356 * 2233 105 55 17 chr5 184388352 184388713 -18696819 - THE1C LTR MaLR 0 375 1 392 307 122 16 chr5 184390297 184390486 -18695046 - L2 LINE L2 -24 3289 3081 328 277 69 13 chr5 184391307 184391466 -18694066 + MER104 DNA Tc2 3 170 -10 282 329 49 21 chr5 184391501 184391644 -18693888 + MIR SINE MIR 76 222 -40 203 200 13 130 chr5 184392394 184392479 -18693053 + MIR SINE MIR 78 145 -63 1853 123 0 4 chr5 184393590 184393850 -18691682 + AluSc SINE Alu 32 290 -19 316 341 83 21 chr5 184393882 184394047 -18691485 - MIR SINE MIR -62 146 10 476 365 51 47 chr5 184394317 184394676 -18690856 + MLT1K LTR MaLR 10 373 -215 5260 159 27 31 chr5 184394676 184395751 -18689781 - MER11C LTR ERVK 0 1071 1 476 365 51 47 chr5 184395751 184395840 -18689692 + MLT1K LTR MaLR 373 460 -128 1609 218 49 12 chr5 184395940 184396366 -18689166 - L1M4 LINE L1 -866 5280 4839 21 0 0 0 chr5 184396495 184396516 -18689016 + AT_rich Low_complexity Low_complexity 1 21 0 656 250 35 0 chr5 184397227 184397371 -18688161 - MER45A DNA AcHobo 0 178 30 7053 259 30 11 chr5 184397747 184401189 -18684343 + L1PA15 LINE L1 1257 4761 -2823 975 147 81 5 chr5 184401189 184401368 -18684164 + MER51B LTR ERV1 210 377 0 414 93 0 67 chr5 184401395 184401470 -18684062 + MER51B-int LTR ERV1 984 1053 -4893 * 1084 90 6 0 chr5 184401468 184401635 -18683897 + MER51B-int LTR ERV1 6085 6252 -1564 * 1418 160 12 8 chr5 184401627 184401871 -18683661 + MER51B-int LTR ERV1 7571 7815 -1 1631 111 115 4 chr5 184401873 184402126 -18683406 + MER51B LTR ERV1 1 281 -96 9417 201 26 0 chr5 184402153 184402490 -18683042 + L1PA15 LINE L1 4775 5102 -2501 207 0 0 0 chr5 184402490 184402513 -18683019 + (CA)n Simple_repeat Simple_repeat 2 24 0 9417 201 26 0 chr5 184402513 184404956 -18680576 + L1PA15 LINE L1 5102 7597 -6 43 85 0 0 chr5 184404956 184405062 -18680470 + AT_rich Low_complexity Low_complexity 1 106 0 21 0 0 0 chr5 184405295 184405316 -18680216 + AT_rich Low_complexity Low_complexity 1 21 0 276 330 98 9 chr5 184405433 184405545 -18679987 - L2 LINE L2 -1 3312 3191 21 36 0 0 chr5 184406210 184406238 -18679294 + AT_rich Low_complexity Low_complexity 1 28 0 2270 78 3 0 chr5 184406266 184406573 -18678959 - AluY SINE Alu -3 308 1 22 56 0 0 chr5 184406889 184406925 -18678607 + AT_rich Low_complexity Low_complexity 1 36 0 1464 274 81 19 chr5 184406940 184407506 -18678026 + L2 LINE L2 1923 2523 -791 1559 232 24 34 chr5 184407506 184407871 -18677661 + L1MC4a LINE L1 5285 5647 -2161 285 29 0 0 chr5 184407871 184407905 -18677627 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1559 232 24 34 chr5 184407905 184407948 -18677584 + L1MC4a LINE L1 5647 5689 -2119 350 248 92 50 chr5 184407993 184408134 -18677398 + L1MC4a LINE L1 5799 5945 -1863 725 246 66 38 chr5 184408167 184408378 -18677154 + MER58A DNA MER1_type 7 223 -1 388 263 134 0 chr5 184408386 184408572 -18676960 + L1MC4a LINE L1 6043 6253 -1555 225 294 128 0 chr5 184408738 184408840 -18676692 + L1MC5 LINE L1 7319 7433 -528 2230 108 10 0 chr5 184408852 184409159 -18676373 - AluY SINE Alu -1 310 1 709 278 51 111 chr5 184409653 184410346 -18675186 + L2 LINE L2 2538 3190 -123 225 0 0 0 chr5 184410417 184410442 -18675090 + (A)n Simple_repeat Simple_repeat 1 25 0 24 53 0 0 chr5 184410779 184410817 -18674715 + AT_rich Low_complexity Low_complexity 1 38 0 448 327 64 0 chr5 184411860 184412016 -18673516 + MIR SINE MIR 2 167 -95 22 0 0 0 chr5 184412059 184412081 -18673451 + AT_rich Low_complexity Low_complexity 1 22 0 1294 224 94 17 chr5 184412650 184413012 -18672520 - MLT1B LTR MaLR 0 390 1 1124 272 34 45 chr5 184413019 184413556 -18671976 + L1M4 LINE L1 3426 3956 -2190 257 254 15 0 chr5 184413559 184413626 -18671906 + L1M4 LINE L1 4091 4158 -1988 1341 241 64 42 chr5 184413633 184413742 -18671790 + L1M4 LINE L1 4226 4331 -1815 2101 133 0 0 chr5 184413742 184414035 -18671497 + AluSg SINE Alu 2 294 -16 1341 241 64 42 chr5 184414035 184414515 -18671017 + L1M4 LINE L1 4331 4828 -1318 442 180 27 64 chr5 184414517 184414590 -18670942 + L1ME1 LINE L1 6056 6130 -204 1692 162 0 49 chr5 184414590 184414917 -18670615 - AluJb SINE Alu 0 312 2 442 180 27 64 chr5 184414917 184414969 -18670563 + L1ME1 LINE L1 6130 6334 0 340 272 12 12 chr5 184414974 184415055 -18670477 - MIR SINE MIR -132 130 50 273 387 21 60 chr5 184416788 184417072 -18668460 - L3 LINE CR1 -218 1359 1087 471 351 79 19 chr5 184417202 184417569 -18667963 + MLT1K LTR MaLR 188 576 -12 254 300 93 25 chr5 184417651 184417910 -18667622 - L3 LINE CR1 -684 893 564 21 36 0 0 chr5 184418019 184418047 -18667485 + AT_rich Low_complexity Low_complexity 1 28 0 1886 110 0 7 chr5 184418222 184418495 -18667037 + AluSc SINE Alu 1 271 -38 21 36 0 0 chr5 184419374 184419402 -18666130 + AT_rich Low_complexity Low_complexity 1 28 0 475 366 52 12 chr5 184419614 184419865 -18665667 - L3 LINE CR1 -1082 495 235 189 107 0 0 chr5 184420055 184420083 -18665449 + (TTG)n Simple_repeat Simple_repeat 2 29 0 10390 178 18 12 chr5 184420481 184423672 -18661860 + L1PB1 LINE L1 2944 6150 -1 22 0 0 0 chr5 184423693 184423715 -18661817 + AT_rich Low_complexity Low_complexity 1 22 0 269 155 86 0 chr5 184423776 184423834 -18661698 - L1PA16 LINE L1 -2 6164 6102 206 145 16 145 chr5 184423938 184424000 -18661532 + L2 LINE L2 3219 3272 0 341 203 0 0 chr5 184424141 184424210 -18661322 - L1MA10 LINE L1 -10 6324 6256 6157 236 75 31 chr5 184424225 184425830 -18659702 - L1ME1 LINE L1 -156 6079 4546 2293 78 3 0 chr5 184425830 184426126 -18659406 + AluY SINE Alu 1 297 -14 6157 236 75 31 chr5 184426126 184427665 -18657867 - L1ME1 LINE L1 -1689 4546 2804 2172 298 46 11 chr5 184427700 184428444 -18657088 - L1ME1 LINE L1 -5598 798 29 195 167 0 0 chr5 184429276 184429318 -18656214 + (CGGA)n Simple_repeat Simple_repeat 2 43 0 195 139 0 0 chr5 184430879 184430915 -18654617 + (TG)n Simple_repeat Simple_repeat 2 37 0 2103 125 7 0 chr5 184431749 184432046 -18653486 - AluSc SINE Alu -10 299 1 44 35 0 0 chr5 184432049 184432107 -18653425 + AT_rich Low_complexity Low_complexity 1 58 0 864 159 95 0 chr5 184432123 184432312 -18653220 - L1MA6 LINE L1 0 6300 6094 26 0 0 0 chr5 184432314 184432340 -18653192 + AT_rich Low_complexity Low_complexity 1 26 0 513 47 0 0 chr5 184432506 184432570 -18652962 + (CA)n Simple_repeat Simple_repeat 2 65 0 238 257 243 7 chr5 184433520 184433558 -18651974 + MIR SINE MIR 81 109 -153 1786 154 7 10 chr5 184433558 184433850 -18651682 + AluJb SINE Alu 1 291 -21 238 257 243 7 chr5 184433850 184433947 -18651585 + MIR SINE MIR 109 248 -14 875 268 189 14 chr5 184434230 184434670 -18650862 + LTR33 LTR ERVL 5 521 0 2141 110 81 57 chr5 184436452 184436638 -18648894 - MSTA LTR MaLR 0 428 248 195 42 0 0 chr5 184436638 184436662 -18648870 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 2141 110 81 57 chr5 184436662 184436893 -18648639 - MSTA LTR MaLR -180 248 1 298 365 91 26 chr5 184436929 184437159 -18648373 + MIR SINE MIR 18 262 0 297 359 9 9 chr5 184437415 184437521 -18648011 + MER5B DNA MER1_type 70 175 -3 2694 244 34 11 chr5 184437911 184439100 -18646432 + L1MDa LINE L1 1847 3065 -3475 250 222 81 40 chr5 184439784 184439883 -18645649 - L1ME LINE L1 -464 5657 5555 902 232 96 27 chr5 184440883 184441263 -18644269 - MER57B LTR ERV1 -9 394 10 2351 165 67 11 chr5 184441514 184441963 -18643569 - MER101 LTR ERV1 0 474 1 591 319 135 0 chr5 184442208 184442437 -18643095 - MIR SINE MIR 0 262 3 282 341 0 0 chr5 184442886 184442968 -18642564 - L2 LINE L2 -4 3309 3228 21 100 0 0 chr5 184443112 184443182 -18642350 + AT_rich Low_complexity Low_complexity 1 70 0 23 0 0 0 chr5 184443349 184443372 -18642160 + AT_rich Low_complexity Low_complexity 1 23 0 459 348 55 68 chr5 184443803 184444257 -18641275 + L1ME3 LINE L1 5493 5940 -222 2198 151 49 10 chr5 184444315 184444725 -18640807 - MSTA LTR MaLR 0 428 3 321 68 0 0 chr5 184444758 184444802 -18640730 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 3684 196 63 9 chr5 184444959 184445699 -18639833 + MSTA-int LTR MaLR 872 1651 0 2109 173 62 7 chr5 184445699 184446103 -18639429 + MSTA LTR MaLR 1 426 -2 21 0 0 0 chr5 184446425 184446446 -18639086 + AT_rich Low_complexity Low_complexity 1 21 0 191 256 23 0 chr5 184446653 184446696 -18638836 + L2 LINE L2 3210 3253 -19 22 0 0 0 chr5 184446710 184446732 -18638800 + AT_rich Low_complexity Low_complexity 1 22 0 288 146 19 39 chr5 184447556 184447659 -18637873 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 21 57 0 0 chr5 184448097 184448132 -18637400 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 184448417 184448452 -18637080 + AT_rich Low_complexity Low_complexity 1 35 0 605 211 81 0 chr5 184448696 184448819 -18636713 + FLAM_C SINE Alu 1 133 -10 1861 196 120 98 chr5 184449202 184449531 -18636001 - MER77 LTR ERV1 0 605 285 306 0 0 0 chr5 184449531 184449565 -18635967 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1891 135 0 0 chr5 184449570 184449844 -18635688 - AluSx SINE Alu -38 274 1 1861 196 120 98 chr5 184449844 184450100 -18635432 - MER77 LTR ERV1 -323 282 1 623 276 28 120 chr5 184450520 184450624 -18634908 + L2 LINE L2 2958 3070 -243 316 109 234 0 chr5 184450624 184450688 -18634844 - MER116 DNA Mariner -1 79 1 623 276 28 120 chr5 184450688 184450975 -18634557 + L2 LINE L2 3070 3313 0 426 306 38 59 chr5 184451072 184451258 -18634274 + MIR SINE MIR 2 183 -79 1040 292 85 66 chr5 184452213 184452338 -18633194 + L1MEd LINE L1 4 125 -6004 1845 197 8 11 chr5 184452338 184452704 -18632828 + MLT1A1 LTR MaLR 1 365 0 1040 292 85 66 chr5 184452704 184453666 -18631866 + L1MEd LINE L1 125 1109 -5020 1513 151 62 4 chr5 184453666 184453783 -18631749 + AluJb SINE Alu 1 110 -202 180 97 0 0 chr5 184453783 184453814 -18631718 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1513 151 62 4 chr5 184453814 184453968 -18631564 + AluJb SINE Alu 110 288 -24 1040 292 85 66 chr5 184453968 184454129 -18631403 + L1MEd LINE L1 1109 1266 -4863 966 70 0 0 chr5 184454924 184455053 -18630479 + L1PA5 LINE L1 6021 6149 -5 364 298 71 0 chr5 184455269 184455410 -18630122 - MIR SINE MIR -13 249 99 1567 129 36 95 chr5 184455453 184455581 -18629951 + L1MA8 LINE L1 5950 6084 -207 1779 158 0 43 chr5 184455581 184455904 -18629628 + AluJb SINE Alu 1 309 -3 1567 129 36 95 chr5 184455904 184456132 -18629400 + L1MA8 LINE L1 6084 6285 -6 207 205 0 0 chr5 184456707 184456746 -18628786 + CT-rich Low_complexity Low_complexity 1 39 0 317 320 180 10 chr5 184457120 184457314 -18628218 - L1 LINE L1 -2192 3954 3728 1843 158 30 8 chr5 184457336 184457703 -18627829 + L1MA5 LINE L1 5920 6294 -6 263 89 0 44 chr5 184459110 184459155 -18626377 - Alu SINE Alu -11 291 249 293 281 52 52 chr5 184459387 184459522 -18626010 - MIR SINE MIR -70 192 58 21 0 0 0 chr5 184459944 184459965 -18625567 + AT_rich Low_complexity Low_complexity 1 21 0 399 350 31 31 chr5 184460499 184460725 -18624807 + MIR SINE MIR 35 260 -2 23 33 0 0 chr5 184460860 184460890 -18624642 + AT_rich Low_complexity Low_complexity 1 30 0 250 303 32 21 chr5 184461041 184461229 -18624303 - L1 LINE L1 -3696 2450 2261 204 206 0 0 chr5 184461572 184461606 -18623926 + polypyrimidine Low_complexity Low_complexity 2 35 0 335 333 70 19 chr5 184461679 184461892 -18623640 - HAL1b LINE L1 -437 911 688 532 295 76 51 chr5 184462475 184463028 -18622504 + L1MEc LINE L1 25 591 -5805 237 196 0 0 chr5 184463095 184463151 -18622381 + GA-rich Low_complexity Low_complexity 4 59 0 246 282 13 0 chr5 184463223 184463301 -18622231 + L1MEc LINE L1 691 769 -5436 637 288 24 13 chr5 184463348 184463726 -18621806 + L1M4 LINE L1 3688 4274 -1872 481 298 43 8 chr5 184463729 184463964 -18621568 - L1M4 LINE L1 -2106 4040 3798 1068 239 56 16 chr5 184463965 184464270 -18621262 + L1ME1 LINE L1 5845 6161 -5 211 365 56 28 chr5 184465077 184465184 -18620348 + L2 LINE L2 2979 3088 -184 307 306 89 40 chr5 184465941 184466065 -18619467 + L2 LINE L2 3143 3272 0 331 250 36 0 chr5 184466657 184466741 -18618791 - L2 LINE L2 0 3313 3227 2061 111 29 37 chr5 184467010 184467388 -18618144 - THE1C LTR MaLR 0 375 1 2114 104 0 0 chr5 184468963 184469250 -18616282 + AluSx SINE Alu 3 289 -23 2616 120 8 0 chr5 184469760 184470159 -18615373 - L1PA15 LINE L1 0 6165 5764 1649 116 26 15 chr5 184470159 184470427 -18615105 + L1PA15 LINE L1 5486 5756 -409 211 130 43 33 chr5 184470623 184470715 -18614817 + (TTATA)n Simple_repeat Simple_repeat 1 93 0 234 0 0 0 chr5 184470809 184470835 -18614697 + (TG)n Simple_repeat Simple_repeat 2 27 0 2517 50 0 0 chr5 184471064 184471364 -18614168 - AluY SINE Alu -10 301 2 5393 21 2 0 chr5 184472806 184473430 -18612102 - L1PA3 LINE L1 -10 6145 5521 565 27 0 13 chr5 184473430 184473543 -18611989 + L1PA3 LINE L1 6080 6155 0 335 218 234 8 chr5 184474271 184474395 -18611137 + MIR SINE MIR 98 249 -13 2679 102 25 19 chr5 184474863 184475296 -18610236 + L1MA3 LINE L1 5870 6305 0 193 306 111 46 chr5 184475781 184475889 -18609643 - L2 LINE L2 0 3313 3199 200 266 0 0 chr5 184476069 184476437 -18609095 + A-rich Low_complexity Low_complexity 1 64 0 1886 161 3 0 chr5 184476092 184476438 -18609094 + AluSx SINE Alu 7 353 0 468 280 45 32 chr5 184476443 184476600 -18608932 + MLT1I LTR MaLR 41 199 -210 432 341 167 30 chr5 184476841 184477507 -18608025 - L2 LINE L2 -457 2857 2101 29 28 0 0 chr5 184477698 184477734 -18607798 + AT_rich Low_complexity Low_complexity 1 36 0 2113 106 0 32 chr5 184479160 184479471 -18606061 + AluY SINE Alu 1 301 -10 4002 201 78 12 chr5 184479474 184480574 -18604958 - L1MB7 LINE L1 -15 6667 5417 * 4813 258 52 52 chr5 184480564 184481480 -18604052 - L1MB7 LINE L1 -3629 3015 2101 1033 224 108 29 chr5 184481480 184481757 -18603775 - AluJo SINE Alu -3 299 1 4813 258 52 52 chr5 184481757 184482408 -18603124 - L1MB7 LINE L1 -4543 2101 1452 2154 119 0 0 chr5 184482408 184482703 -18602829 - AluSq SINE Alu -18 295 1 4813 258 52 52 chr5 184482703 184483834 -18601698 - L1MB7 LINE L1 -5192 1452 192 2418 62 0 0 chr5 184483834 184484141 -18601391 - AluY SINE Alu -4 307 1 4813 258 52 52 chr5 184484141 184484307 -18601225 - L1MB7 LINE L1 -6452 192 28 21 36 0 0 chr5 184484682 184484710 -18600822 + AT_rich Low_complexity Low_complexity 1 28 0 650 329 75 43 chr5 184485562 184485620 -18599912 - L2 LINE L2 0 3313 3258 1542 181 63 14 chr5 184485620 184485968 -18599564 - MLT1A1 LTR MaLR 0 365 1 650 329 75 43 chr5 184485968 184486562 -18598970 - L2 LINE L2 -55 3258 2638 22 0 0 0 chr5 184488566 184488588 -18596944 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr5 184488620 184488655 -18596877 + AT_rich Low_complexity Low_complexity 1 35 0 250 241 0 0 chr5 184489788 184489846 -18595686 - L2 LINE L2 0 3272 3215 29 0 0 0 chr5 184490370 184490399 -18595133 + AT_rich Low_complexity Low_complexity 1 29 0 1700 167 51 3 chr5 184491073 184491367 -18594165 - AluJb SINE Alu -2 310 3 2711 170 234 9 chr5 184492503 184493084 -18592448 - LTR28 LTR ERV1 0 1020 309 1058 174 49 0 chr5 184493067 184493251 -18592281 - LTR28 LTR ERV1 -827 193 1 * 233 120 40 0 chr5 184493373 184493423 -18592109 + T-rich Low_complexity Low_complexity 2 53 0 210 198 47 12 chr5 184494176 184494262 -18591270 + (TA)n Simple_repeat Simple_repeat 2 90 0 247 319 30 67 chr5 184494672 184494769 -18590763 + L2 LINE L2 3141 3233 -39 555 199 86 95 chr5 184494769 184494990 -18590542 - MER20 DNA MER1_type 0 219 1 247 319 30 67 chr5 184494990 184495027 -18590505 + L2 LINE L2 3233 3270 -2 438 235 49 88 chr5 184496594 184496798 -18588734 + LTR33A LTR ERVL 2 197 -326 255 31 0 0 chr5 184497082 184497114 -18588418 + (TG)n Simple_repeat Simple_repeat 2 33 0 785 300 158 19 chr5 184497983 184498620 -18586912 + L2 LINE L2 2121 3280 -33 182 37 37 0 chr5 184498642 184498669 -18586863 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 245 259 25 49 chr5 184499218 184499299 -18586233 + L2 LINE L2 3193 3271 -1 615 283 89 21 chr5 184499733 184500058 -18585474 - L1M4 LINE L1 -2543 3603 3257 1846 135 4 4 chr5 184500393 184500667 -18584865 - AluY SINE Alu -19 292 19 26 30 0 0 chr5 184501221 184501254 -18584278 + AT_rich Low_complexity Low_complexity 1 33 0 250 278 0 11 chr5 184501404 184501494 -18584038 + CT-rich Low_complexity Low_complexity 2 90 0 766 243 27 64 chr5 184501725 184501852 -18583680 + L1ME2 LINE L1 5366 5496 -838 1913 151 0 3 chr5 184501852 184502157 -18583375 - AluJo SINE Alu -8 304 1 766 243 27 64 chr5 184502157 184502779 -18582753 + L1ME2 LINE L1 5496 6331 -3 300 332 123 36 chr5 184503101 184503334 -18582198 - L2 LINE L2 -221 3051 2799 1570 142 16 8 chr5 184503479 184503733 -18581799 - MLT1B LTR MaLR -134 256 1 585 257 30 33 chr5 184503824 184504229 -18581303 + L1MEc LINE L1 2041 2391 -3824 220 224 0 0 chr5 184504553 184504602 -18580930 + (TAA)n Simple_repeat Simple_repeat 2 50 0 24 32 0 0 chr5 184504702 184504733 -18580799 + AT_rich Low_complexity Low_complexity 1 31 0 224 274 78 29 chr5 184505204 184505306 -18580226 + L2 LINE L2 3207 3313 0 802 268 26 5 chr5 184556674 184556868 -18528664 - MER45C DNA AcHobo -752 201 4 540 314 124 5 chr5 184556930 184557124 -18528408 + MER45C DNA AcHobo 416 632 -321 275 226 0 0 chr5 184557120 184557173 -18528359 + MER45C DNA AcHobo 899 951 -2 * 840 187 119 104 chr5 184557330 184557715 -18527817 - MSTD LTR MaLR -1 395 5 3612 45 18 0 chr5 184557723 184558171 -18527361 - L1PA4 LINE L1 -1 6154 5699 20733 34 4 2 chr5 184558271 184560945 -18524587 - L1PA4 LINE L1 -637 5518 2838 200 319 25 76 chr5 184561463 184561620 -18523912 - L2 LINE L2 -189 3083 2935 1873 142 7 3 chr5 184561767 184562076 -18523456 - L1MC1 LINE L1 -9 6324 6015 1610 232 31 0 chr5 184563149 184563503 -18522029 + MLT1A1 LTR MaLR 1 365 0 5160 225 142 44 chr5 184563503 184564208 -18521324 + MLT1A1-int LTR MaLR 1 635 -1100 1939 136 3 27 chr5 184564208 184564503 -18521029 + AluSx SINE Alu 1 288 -24 266 0 29 0 chr5 184564506 184564540 -18520992 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5160 225 142 44 chr5 184564540 184565410 -18520122 + MLT1A1-int LTR MaLR 636 1735 0 1374 222 73 6 chr5 184565410 184565752 -18519780 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr5 184566132 184566153 -18519379 + AT_rich Low_complexity Low_complexity 1 21 0 1043 212 19 22 chr5 184566158 184566474 -18519058 - MER33 DNA MER1_type -1 323 9 23 0 0 0 chr5 184567768 184567791 -18517741 + AT_rich Low_complexity Low_complexity 1 23 0 607 286 32 5 chr5 184568190 184568379 -18517153 - L2 LINE L2 -509 2805 2612 310 306 103 12 chr5 184568556 184568808 -18516724 + L1ME3A LINE L1 5597 5871 -299 214 339 81 24 chr5 184569863 184569987 -18515545 - MIR SINE MIR -62 200 70 298 323 124 32 chr5 184570066 184570283 -18515249 + MIR SINE MIR 2 238 -24 228 321 107 30 chr5 184571915 184572046 -18513486 + L2 LINE L2 3117 3257 -15 188 233 25 141 chr5 184572681 184572844 -18512688 + L2 LINE L2 2920 3063 -250 930 202 11 5 chr5 184574768 184574956 -18510576 + MER5A DNA MER1_type 1 189 0 182 308 0 0 chr5 184575309 184575361 -18510171 + MER5B DNA MER1_type 13 64 -114 306 342 51 0 chr5 184576242 184576359 -18509173 - MIR SINE MIR -21 241 119 601 283 50 0 chr5 184577535 184577733 -18507799 + L2 LINE L2 1951 2158 -1156 324 295 48 0 chr5 184577935 184578040 -18507492 - MIR SINE MIR -28 234 125 274 216 279 0 chr5 184578069 184578180 -18507352 - MIR SINE MIR 0 262 121 1546 152 45 103 chr5 184578902 184579298 -18506234 - THE1C LTR MaLR -2 373 1 255 125 0 0 chr5 184580059 184580099 -18505433 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 643 260 36 100 chr5 184580143 184580393 -18505139 + MIR SINE MIR 6 239 -23 25 65 0 0 chr5 184580557 184580603 -18504929 + AT_rich Low_complexity Low_complexity 1 46 0 1990 121 0 4 chr5 184580698 184580979 -18504553 - AluSx SINE Alu -32 280 1 409 326 34 7 chr5 184581599 184581746 -18503786 + L2 LINE L2 3163 3313 0 484 302 121 19 chr5 184581913 184582128 -18503404 + MIR SINE MIR 7 243 -19 981 242 11 0 chr5 184582318 184582508 -18503024 - MER58A DNA MER1_type -3 221 30 203 237 161 68 chr5 184583055 184583090 -18502442 + MIR SINE MIR 132 162 -100 849 207 13 69 chr5 184583090 184583164 -18502368 + MER20 DNA MER1_type 1 78 -141 2070 146 0 0 chr5 184583164 184583472 -18502060 - AluJb SINE Alu 0 312 5 849 207 13 69 chr5 184583472 184583629 -18501903 + MER20 DNA MER1_type 78 219 0 203 237 161 68 chr5 184583629 184583711 -18501821 + MIR SINE MIR 162 260 -2 890 150 64 21 chr5 184584890 184585077 -18500455 + L1ME LINE L1 5546 5740 -424 221 401 144 0 chr5 184585086 184585288 -18500244 - L3 LINE CR1 -382 1195 965 446 311 23 30 chr5 184585669 184585801 -18499731 - MIR SINE MIR -122 140 10 320 327 175 0 chr5 184586799 184587016 -18498516 - MIR SINE MIR 0 262 8 2142 75 4 4 chr5 184587163 184587441 -18498091 + AluY SINE Alu 1 278 -33 798 263 77 87 chr5 184587802 184588216 -18497316 + MLT1J2 LTR MaLR 20 429 -21 1447 230 88 53 chr5 184588688 184589175 -18496357 + MLT1D LTR MaLR 1 504 -1 393 310 67 50 chr5 184590884 184591123 -18494409 + MIR SINE MIR 14 256 -6 1084 132 11 108 chr5 184591402 184591782 -18493750 - Tigger2a DNA MER2_type -1 443 2 371 339 23 23 chr5 184591835 184592012 -18493520 + MER5A DNA MER1_type 12 188 -1 352 303 40 0 chr5 184593039 184593138 -18492394 + L2 LINE L2 3169 3271 -1 186 370 53 53 chr5 184593225 184593452 -18492080 - L2 LINE L2 -163 3109 2883 295 347 76 0 chr5 184593472 184593616 -18491916 + MER117 DNA MER1_type 2 156 -41 1032 202 0 0 chr5 184594136 184594324 -18491208 + MER5A DNA MER1_type 2 189 0 536 203 155 18 chr5 184595062 184595183 -18490349 + MER5A DNA MER1_type 8 161 -28 2589 105 3 6 chr5 184595183 184595544 -18489988 - THE1B LTR MaLR 0 364 5 536 203 155 18 chr5 184595544 184595578 -18489954 + MER5A DNA MER1_type 161 189 0 2157 122 3 0 chr5 184596229 184596523 -18489009 + AluSc SINE Alu 1 295 -14 414 0 0 0 chr5 184597310 184597356 -18488176 + (TG)n Simple_repeat Simple_repeat 2 47 0 34 42 0 0 chr5 184598725 184598773 -18486759 + AT_rich Low_complexity Low_complexity 1 48 0 399 21 0 0 chr5 184599243 184599291 -18486241 + (CA)n Simple_repeat Simple_repeat 2 49 0 427 345 45 10 chr5 184600105 184600305 -18485227 + L2 LINE L2 2863 3069 -203 269 288 0 0 chr5 184600772 184600845 -18484687 + L2 LINE L2 2225 2297 -1017 241 354 130 14 chr5 184600926 184601141 -18484391 + L2 LINE L2 2535 2774 -540 1589 127 0 4 chr5 184601146 184601383 -18484149 + AluSg/x SINE Alu 74 309 -1 211 61 30 61 chr5 184601393 184601459 -18484073 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 289 329 153 68 chr5 184601480 184601905 -18483627 + L2 LINE L2 2807 3267 -5 188 182 0 0 chr5 184601948 184601981 -18483551 + L2 LINE L2 3279 3311 -2 2053 109 3 7 chr5 184602603 184602918 -18482614 + AluSq SINE Alu 1 314 0 1363 227 60 40 chr5 184603094 184603548 -18481984 + MLT1C LTR MaLR 5 467 0 2039 124 21 0 chr5 184603838 184604129 -18481403 + AluSx SINE Alu 3 299 -13 309 278 33 11 chr5 184605329 184605419 -18480113 - L1MC4 LINE L1 -1334 6708 6617 208 322 87 26 chr5 184605636 184605751 -18479781 + L2 LINE L2 3102 3223 -49 5332 58 1 0 chr5 184610820 184611497 -18474035 + L1PA7 LINE L1 5466 6143 -11 2183 113 0 0 chr5 184612413 184612713 -18472819 + AluSq SINE Alu 1 300 -13 23 78 0 0 chr5 184612981 184613032 -18472500 + AT_rich Low_complexity Low_complexity 1 51 0 189 107 0 0 chr5 184613536 184613564 -18471968 + (T)n Simple_repeat Simple_repeat 1 28 0 230 312 21 54 chr5 184614274 184614367 -18471165 + MLT1K LTR MaLR 151 240 -348 363 300 53 20 chr5 184614554 184614704 -18470828 + MLT1K LTR MaLR 433 587 -1 439 246 244 51 chr5 184619086 184619435 -18466097 + MLT1H LTR MaLR 30 412 -143 290 243 14 0 chr5 184619466 184619536 -18465996 + MLT1H LTR MaLR 472 542 -7 2042 126 9 28 chr5 184620331 184620649 -18464883 - AluSq SINE Alu -1 312 1 492 190 0 25 chr5 184620927 184621060 -18464472 - L1PA16 LINE L1 -339 5827 5704 390 362 70 27 chr5 184621065 184621366 -18464166 + L2 LINE L2 2439 2752 -562 189 147 0 0 chr5 184621471 184621505 -18464027 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 413 318 136 33 chr5 184621671 184622112 -18463420 - L2 LINE L2 -223 3090 2607 2336 92 0 0 chr5 184622335 184622630 -18462902 + AluSg SINE Alu 1 295 -15 1274 164 22 25 chr5 184622814 184623089 -18462443 + L1MA7 LINE L1 6018 6291 0 800 242 124 10 chr5 184623898 184624129 -18461403 - MLT1G LTR MaLR 0 590 357 * 2871 100 10 3 chr5 184624125 184624515 -18461017 + MER1A DNA MER1_type 118 510 -19 1240 270 67 0 chr5 184624513 184624854 -18460678 - MLT1G LTR MaLR -226 364 1 * 237 180 0 0 chr5 184625279 184625329 -18460203 + A-rich Low_complexity Low_complexity 1 50 0 21 57 0 0 chr5 184625563 184625598 -18459934 + AT_rich Low_complexity Low_complexity 1 35 0 2392 79 0 31 chr5 184626072 184626389 -18459143 - AluSp SINE Alu 0 313 7 2309 81 0 0 chr5 184626769 184627096 -18458436 - AluY SINE Alu 0 327 1 22 0 0 0 chr5 184627109 184627131 -18458401 + AT_rich Low_complexity Low_complexity 1 22 0 2506 17 7 0 chr5 184627138 184627428 -18458104 + L1PA4 LINE L1 5864 6155 0 819 282 73 76 chr5 184627762 184627871 -18457661 - Charlie7 DNA MER1_type -1178 1434 1326 180 0 0 0 chr5 184627871 184627891 -18457641 + (TC)n Simple_repeat Simple_repeat 1 20 0 819 282 73 76 chr5 184627891 184628244 -18457288 - Charlie7 DNA MER1_type -1286 1326 973 2216 93 0 0 chr5 184628244 184628524 -18457008 + AluSx SINE Alu 1 280 -32 198 71 0 0 chr5 184628524 184628552 -18456980 + (TAA)n Simple_repeat Simple_repeat 1 28 0 819 282 73 76 chr5 184628552 184628679 -18456853 - Charlie7 DNA MER1_type -1637 975 845 1858 114 7 30 chr5 184628712 184628983 -18456549 + AluSq SINE Alu 1 265 -48 2221 58 0 15 chr5 184628983 184629255 -18456277 + AluY SINE Alu 32 301 -10 1018 284 113 29 chr5 184629256 184629813 -18455719 - Charlie7 DNA MER1_type -1901 711 108 237 279 29 100 chr5 184629917 184630024 -18455508 - L3 LINE CR1 -127 1450 1354 2379 74 0 32 chr5 184630024 184630334 -18455198 - AluSc SINE Alu -9 300 1 237 279 29 100 chr5 184630334 184630366 -18455166 - L3 LINE CR1 -223 1354 1321 404 282 23 0 chr5 184631324 184631455 -18454077 + MER94 DNA DNA 1 134 0 182 225 113 28 chr5 184631511 184631582 -18453950 - MER5A DNA MER1_type -1 188 112 1479 236 106 44 chr5 184631750 184632436 -18453096 + HsTC2a DNA Tc2 16 744 0 1865 132 15 0 chr5 184633831 184634103 -18451429 - AluSx SINE Alu -10 302 27 244 304 25 0 chr5 184634165 184634244 -18451288 + MIR SINE MIR 33 113 -95 2129 129 3 3 chr5 184634670 184634980 -18450552 + AluSx SINE Alu 1 310 -2 13522 35 1 1 chr5 184635449 184637127 -18448405 - L1PA4 LINE L1 -2709 3437 1760 16241 30 3 3 chr5 184637128 184639851 -18445681 + L1PA4 LINE L1 3436 6152 -3 824 128 0 15 chr5 184642138 184642271 -18443261 + FLAM_C SINE Alu 1 131 -2 2224 107 0 0 chr5 184642700 184642999 -18442533 - AluSx SINE Alu -13 299 1 27 0 0 0 chr5 184643656 184643683 -18441849 + AT_rich Low_complexity Low_complexity 1 27 0 6770 56 45 0 chr5 184644409 184645267 -18440265 + MER11D LTR ERVK 1 897 0 5980 103 37 5 chr5 184645442 184646955 -18438577 - L1PA12 LINE L1 0 6168 4628 6517 150 33 30 chr5 184647309 184647340 -18438192 - Tigger3b DNA MER2_type -1797 1231 1202 17378 53 1 2 chr5 184647340 184650252 -18435280 - L1PA5 LINE L1 -3 6151 3169 6517 150 33 30 chr5 184650252 184651443 -18434089 - Tigger3b DNA MER2_type -1826 1202 6 219 276 53 0 chr5 184652036 184652112 -18433420 + MIR SINE MIR 60 139 -123 714 269 12 29 chr5 184652466 184652708 -18432824 - L1MA9 LINE L1 -40 6272 6035 2279 120 0 0 chr5 184653629 184653938 -18431594 - AluSg SINE Alu -1 309 1 2290 103 0 3 chr5 184655046 184655348 -18430184 - AluSq SINE Alu 0 313 13 211 351 182 12 chr5 184655556 184655721 -18429811 - MIR SINE MIR -13 249 57 4956 174 29 10 chr5 184656510 184657871 -18427661 - L1PA16 LINE L1 -7 6159 4768 233 208 64 16 chr5 184658405 184658530 -18427002 + (TA)n Simple_repeat Simple_repeat 2 132 0 24 0 0 0 chr5 184658542 184658566 -18426966 + AT_rich Low_complexity Low_complexity 1 24 0 249 147 73 44 chr5 184658607 184658675 -18426857 - HsTC2 DNA Tc2 -1814 84 15 2530 50 0 0 chr5 184658877 184659174 -18426358 + AluY SINE Alu 1 297 -14 23 68 0 0 chr5 184659958 184660002 -18425530 + AT_rich Low_complexity Low_complexity 1 44 0 731 203 0 0 chr5 184661383 184661516 -18424016 + FLAM_C SINE Alu 3 135 -8 324 303 101 30 chr5 184662015 184662213 -18423319 - MIR SINE MIR -48 214 3 23 33 0 0 chr5 184663385 184663415 -18422117 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 184664214 184664237 -18421295 + AT_rich Low_complexity Low_complexity 1 23 0 291 227 193 11 chr5 184664362 184664450 -18421082 - L1ME3A LINE L1 -105 6065 5962 425 265 133 57 chr5 184664824 184665209 -18420323 - HAL1b LINE L1 -640 708 295 491 321 66 20 chr5 184666454 184666650 -18418882 - MIR SINE MIR -30 232 28 1477 219 22 32 chr5 184668046 184668415 -18417117 + MLT1A1 LTR MaLR 1 365 0 1523 194 7 7 chr5 184668707 184668996 -18416536 + AluJb SINE Alu 6 294 -18 222 395 23 16 chr5 184669293 184669422 -18416110 - L2 LINE L2 -2 3311 3182 197 369 160 28 chr5 184669659 184669941 -18415591 - L2 LINE L2 -950 2364 2046 24 0 0 0 chr5 184670631 184670655 -18414877 + AT_rich Low_complexity Low_complexity 1 24 0 1124 118 11 16 chr5 184671774 184671960 -18413572 - L1MA4 LINE L1 -443 5857 5673 468 0 0 0 chr5 184672169 184672221 -18413311 + (CA)n Simple_repeat Simple_repeat 2 53 0 1014 153 34 5 chr5 184673015 184673224 -18412308 + L1MA7 LINE L1 6076 6290 -1 209 159 23 0 chr5 184674348 184674392 -18411140 + GA-rich Low_complexity Low_complexity 2 46 0 213 39 0 0 chr5 184674579 184674605 -18410927 + (TA)n Simple_repeat Simple_repeat 1 26 0 300 27 0 0 chr5 184674613 184674650 -18410882 + (TG)n Simple_repeat Simple_repeat 2 38 0 24 0 0 0 chr5 184675382 184675406 -18410126 + AT_rich Low_complexity Low_complexity 1 24 0 207 158 18 35 chr5 184675825 184675882 -18409650 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 300 230 0 26 chr5 184675885 184675998 -18409534 + GA-rich Low_complexity Low_complexity 2 111 0 682 282 116 24 chr5 184675998 184676378 -18409154 + L1ME3A LINE L1 5478 5892 -278 361 301 107 17 chr5 184676784 184677133 -18408399 - L1MC4a LINE L1 -330 5791 5550 282 301 84 21 chr5 184677290 184677529 -18408003 - HAL1b LINE L1 -348 1000 747 2598 17 7 0 chr5 184679955 184680256 -18405276 - AluY SINE Alu -8 303 1 201 282 82 18 chr5 184680452 184680562 -18404970 + MIR SINE MIR 84 200 -62 255 234 57 48 chr5 184680581 184680705 -18404827 - L2 LINE L2 -69 3244 3120 351 0 0 0 chr5 184681616 184681655 -18403877 + (CA)n Simple_repeat Simple_repeat 1 39 0 194 306 65 19 chr5 184681791 184681899 -18403633 + MIR3 SINE MIR 70 182 -26 341 341 24 0 chr5 184684917 184685043 -18400489 - L2 LINE L2 -17 3296 3168 2187 87 3 39 chr5 184686027 184686337 -18399195 - AluSp SINE Alu -14 299 1 1998 96 18 7 chr5 184686617 184686922 -18398610 - AluSx SINE Alu 0 308 1 845 255 70 12 chr5 184686983 184687242 -18398290 + MER54A LTR ERVL 301 574 -327 21 0 0 0 chr5 184688031 184688052 -18397480 + AT_rich Low_complexity Low_complexity 1 21 0 353 321 45 28 chr5 184688508 184688795 -18396737 - L1M4 LINE L1 -2058 4088 3797 1941 162 21 24 chr5 184688887 184689263 -18396269 - THE1C LTR MaLR 0 375 1 2397 43 3 13 chr5 184691661 184691964 -18393568 + AluY SINE Alu 1 300 -11 307 227 45 11 chr5 184692048 184692136 -18393396 - L1MC4 LINE L1 -1339 6703 6613 2051 125 0 0 chr5 184692164 184692459 -18393073 - AluSx SINE Alu -17 295 1 360 315 69 30 chr5 184692531 184692734 -18392798 + MIR SINE MIR 52 262 0 24 0 0 0 chr5 184694698 184694722 -18390810 + AT_rich Low_complexity Low_complexity 1 24 0 2172 114 0 3 chr5 184695552 184695851 -18389681 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr5 184696126 184696148 -18389384 + AT_rich Low_complexity Low_complexity 1 22 0 202 333 36 0 chr5 184696311 184696395 -18389137 + L3 LINE CR1 934 1020 -557 342 299 92 92 chr5 184696549 184696820 -18388712 + L2 LINE L2 2996 3266 -6 324 348 15 22 chr5 184697060 184697195 -18388337 + L3 LINE CR1 1275 1408 -169 354 298 171 6 chr5 184697618 184697776 -18387756 - MIR SINE MIR -29 233 50 507 294 133 52 chr5 184697912 184698685 -18386847 - L1MDa LINE L1 -3947 2182 1415 285 341 61 27 chr5 184698824 184699120 -18386412 - L1MDa LINE L1 -4862 1257 952 514 97 0 21 chr5 184699368 184699461 -18386071 + (TTCC)n Simple_repeat Simple_repeat 4 94 0 880 143 61 7 chr5 184699467 184699614 -18385918 - AluJb SINE Alu -54 258 104 1954 154 6 3 chr5 184699628 184699939 -18385593 - AluSx SINE Alu 0 312 1 2099 104 7 7 chr5 184700015 184700322 -18385210 - AluSp SINE Alu -6 307 1 342 241 146 29 chr5 184702112 184702249 -18383283 - MIR SINE MIR -98 164 12 2165 116 7 0 chr5 184702466 184702776 -18382756 + AluSx SINE Alu 1 312 0 784 136 8 0 chr5 184702867 184702999 -18382533 + L1MA4A LINE L1 6166 6298 -5 33 0 0 0 chr5 184703569 184703602 -18381930 + AT_rich Low_complexity Low_complexity 1 33 0 590 168 138 36 chr5 184704083 184704250 -18381282 + MER53 DNA DNA 4 187 -2 912 140 7 14 chr5 184704434 184704577 -18380955 - AluSg/x SINE Alu -55 257 116 249 275 99 38 chr5 184705362 184705467 -18380065 - MIR SINE MIR 0 262 146 1945 153 0 7 chr5 184705467 184705790 -18379742 - AluSx SINE Alu 0 312 1 249 275 99 38 chr5 184705790 184705815 -18379717 - MIR SINE MIR -116 146 124 5436 136 56 17 chr5 184706309 184706664 -18378868 - L1PB1 LINE L1 -3 6148 5808 333 62 0 0 chr5 184706664 184706712 -18378820 + (TG)n Simple_repeat Simple_repeat 2 49 0 5436 136 56 17 chr5 184706712 184707140 -18378392 - L1PB1 LINE L1 -343 5808 5398 1895 109 4 0 chr5 184707140 184707396 -18378136 + AluSc SINE Alu 9 265 -44 5436 136 56 17 chr5 184707396 184707595 -18377937 - L1PB1 LINE L1 -753 5398 5208 2133 98 7 14 chr5 184707595 184707890 -18377642 - AluSc SINE Alu -11 298 6 5436 136 56 17 chr5 184707890 184708159 -18377373 - L1PB1 LINE L1 -943 5208 4870 1810 169 3 3 chr5 184708157 184708501 -18377031 + L1PB1 LINE L1 4503 4846 -1300 * 369 0 0 0 chr5 184709011 184709052 -18376480 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1886 145 3 0 chr5 184709054 184709337 -18376195 - AluSx SINE Alu -28 284 1 968 266 193 13 chr5 184709432 184710220 -18375312 + Charlie2 DNA MER1_type 1858 2787 -75 266 256 299 7 chr5 184710511 184710648 -18374884 - MIR SINE MIR 0 262 86 357 372 64 0 chr5 184710833 184710989 -18374543 + L2 LINE L2 3107 3272 0 775 310 79 5 chr5 184711096 184711512 -18374020 + MER113 DNA MER1_type? 33 479 -42 277 222 0 16 chr5 184711533 184711596 -18373936 + MIR SINE MIR 201 262 0 2820 150 42 40 chr5 184712928 184713527 -18372005 - L1MB3 LINE L1 -3 6180 5581 261 57 0 0 chr5 184713596 184713631 -18371901 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 184714710 184714732 -18370800 + AT_rich Low_complexity Low_complexity 1 22 0 512 291 43 103 chr5 184715261 184715612 -18369920 + L2 LINE L2 2918 3247 -25 396 257 191 15 chr5 184715823 184715959 -18369573 - MER5A DNA MER1_type 0 189 30 195 42 0 0 chr5 184716065 184716089 -18369443 + (GAA)n Simple_repeat Simple_repeat 1 24 0 201 83 28 28 chr5 184716994 184717030 -18368502 + (GAGAA)n Simple_repeat Simple_repeat 5 40 0 23 68 0 0 chr5 184717376 184717420 -18368112 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 184720330 184720351 -18365181 + AT_rich Low_complexity Low_complexity 1 21 0 548 225 99 28 chr5 184720351 184720493 -18365039 - AluJb SINE Alu -25 287 136 22 0 0 0 chr5 184720493 184720515 -18365017 + AT_rich Low_complexity Low_complexity 1 22 0 231 114 0 0 chr5 184720841 184720876 -18364656 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 1165 188 3 97 chr5 184721058 184721387 -18364145 + AluJb SINE Alu 2 299 -3 1535 231 60 13 chr5 184721840 184722226 -18363306 + MER74A LTR ERVL 128 531 -27 2372 157 13 52 chr5 184722497 184722743 -18362789 + MER83 LTR ERV1 3 224 -224 2007 150 0 0 chr5 184722743 184723050 -18362482 + AluSx SINE Alu 1 307 -5 2372 157 13 52 chr5 184723050 184723267 -18362265 + MER83 LTR ERV1 224 448 0 957 295 108 46 chr5 184723295 184723507 -18362025 - L2 LINE L2 -16 3297 3099 1649 110 0 0 chr5 184723507 184723725 -18361807 + AluSg/x SINE Alu 85 302 -10 957 295 108 46 chr5 184723725 184724234 -18361298 - L2 LINE L2 -214 3099 2516 2813 146 64 22 chr5 184724256 184724435 -18361097 - L1MA8 LINE L1 0 6291 6121 279 0 0 0 chr5 184724435 184724466 -18361066 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2200 96 0 0 chr5 184724466 184724747 -18360785 - AluSc SINE Alu -28 281 1 2813 146 64 22 chr5 184724747 184724851 -18360681 - L1MA8 LINE L1 -170 6121 6023 483 107 0 0 chr5 184724851 184724926 -18360606 + (CA)n Simple_repeat Simple_repeat 1 75 0 2813 146 64 22 chr5 184724926 184725189 -18360343 - L1MA8 LINE L1 -268 6023 5720 1814 164 0 22 chr5 184727942 184728254 -18357278 + AluJo SINE Alu 1 305 -7 29 0 0 0 chr5 184730080 184730109 -18355423 + AT_rich Low_complexity Low_complexity 1 29 0 228 353 82 0 chr5 184731770 184731855 -18353677 - MER5A DNA MER1_type 0 189 98 1128 87 0 0 chr5 184732094 184732243 -18353289 - AluY SINE Alu -12 299 151 1873 152 0 7 chr5 184732422 184732731 -18352801 - AluSx SINE Alu -5 307 1 274 281 0 22 chr5 184732864 184732953 -18352579 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 245 181 0 56 chr5 184733843 184733915 -18351617 - L1MC4 LINE L1 -1327 6715 6648 955 107 8 0 chr5 184734977 184735108 -18350424 - AluSc SINE Alu -177 132 1 21 57 0 0 chr5 184735506 184735541 -18349991 + AT_rich Low_complexity Low_complexity 1 35 0 951 216 128 59 chr5 184735807 184736080 -18349452 - AluJo SINE Alu -10 292 1 207 0 0 0 chr5 184738452 184738475 -18347057 + (T)n Simple_repeat Simple_repeat 1 23 0 344 329 41 36 chr5 184739551 184739770 -18345762 - L1MC/D LINE L1 -2154 5654 5435 1831 164 0 3 chr5 184740510 184740808 -18344724 + AluSx SINE Alu 1 297 -15 294 276 83 34 chr5 184741769 184742034 -18343498 + L1MB5 LINE L1 4741 5018 -1128 328 333 86 16 chr5 184742159 184742402 -18343130 + L1MB5 LINE L1 5666 5925 -249 287 317 44 67 chr5 184742637 184742817 -18342715 + L3 LINE CR1 801 976 -601 1658 124 13 52 chr5 184742850 184743157 -18342375 + AluSx SINE Alu 1 295 -17 187 271 0 0 chr5 184743275 184743323 -18342209 + MIR SINE MIR 110 157 -105 379 351 58 16 chr5 184743628 184743816 -18341716 + L3 LINE CR1 1280 1475 -102 1336 257 77 38 chr5 184743963 184744442 -18341090 - MLT1D LTR MaLR -7 498 1 1484 200 26 49 chr5 184745414 184745487 -18340045 + MER58B DNA MER1_type 5 78 -2342 4506 90 9 9 chr5 184745487 184746130 -18339402 + L1PA10 LINE L1 5526 6168 0 1484 200 26 49 chr5 184746130 184746401 -18339131 + MER58B DNA MER1_type 78 341 0 2366 78 0 10 chr5 184746432 184746741 -18338791 - AluY SINE Alu -5 306 1 238 138 0 46 chr5 184747604 184747669 -18337863 + (CATA)n Simple_repeat Simple_repeat 4 65 0 217 283 9 35 chr5 184747669 184747782 -18337750 + (TATATG)n Simple_repeat Simple_repeat 3 112 0 22 0 0 0 chr5 184748113 184748135 -18337397 + AT_rich Low_complexity Low_complexity 1 22 0 2001 82 4 15 chr5 184748919 184749187 -18336345 - AluSx SINE Alu -14 298 34 327 347 68 27 chr5 184749489 184749711 -18335821 - L3 LINE CR1 -9 1568 1338 417 247 110 87 chr5 184749846 184750065 -18335467 - MIR SINE MIR -27 235 12 261 363 115 0 chr5 184750073 184750186 -18335346 - L3 LINE CR1 -445 1132 1007 1984 130 10 3 chr5 184750491 184750791 -18334741 + AluSx SINE Alu 1 302 -10 2137 109 0 34 chr5 184751308 184751628 -18333904 - AluSc SINE Alu 0 309 1 240 384 108 30 chr5 184752180 184752412 -18333120 + L2 LINE L2 946 1195 -2119 189 74 0 0 chr5 184752698 184752725 -18332807 + (T)n Simple_repeat Simple_repeat 1 27 0 1997 271 44 11 chr5 184753017 184753656 -18331876 - L1ME1 LINE L1 -2 6164 5505 * 4822 159 30 10 chr5 184753634 184754427 -18331105 - L1PA15-16 LINE L1 -6040 809 1 317 346 77 43 chr5 184755047 184755374 -18330158 + L2 LINE L2 2535 2872 -442 1939 138 34 0 chr5 184756284 184756580 -18328952 - AluSx SINE Alu -6 306 1 30 77 0 0 chr5 184758308 184758373 -18327159 + AT_rich Low_complexity Low_complexity 1 65 0 882 310 105 14 chr5 184758948 184759387 -18326145 + LTR16C LTR ERVL 1 479 -12 195 114 0 0 chr5 184759457 184759492 -18326040 + (CAT)n Simple_repeat Simple_repeat 3 37 0 291 331 69 50 chr5 184759564 184759724 -18325808 - MIR SINE MIR -48 214 52 39 50 0 0 chr5 184760168 184760228 -18325304 + AT_rich Low_complexity Low_complexity 1 60 0 28 48 0 0 chr5 184760671 184760713 -18324819 + AT_rich Low_complexity Low_complexity 1 42 0 2183 112 3 6 chr5 184760716 184761030 -18324502 + AluSp SINE Alu 1 313 0 706 214 105 2 chr5 184761627 184761820 -18323712 - L1M3 LINE L1 -550 5692 5484 249 290 140 36 chr5 184761931 184762124 -18323408 - MIR SINE MIR -1 261 49 1564 197 7 3 chr5 184762499 184762788 -18322744 + AluJo SINE Alu 3 292 -20 24 53 0 0 chr5 184762791 184762829 -18322703 + AT_rich Low_complexity Low_complexity 1 38 0 184 369 115 8 chr5 184763716 184763838 -18321694 + L2 LINE L2 2836 2970 -302 193 333 65 43 chr5 184764012 184764150 -18321382 + L2 LINE L2 3169 3309 -4 2378 159 25 27 chr5 184764651 184765140 -18320392 + L1MA9 LINE L1 5825 6312 0 32 26 0 0 chr5 184765391 184765430 -18320102 + AT_rich Low_complexity Low_complexity 1 39 0 1992 140 54 26 chr5 184765499 184765849 -18319683 + THE1B LTR MaLR 5 364 0 22 0 0 0 chr5 184766021 184766043 -18319489 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr5 184766120 184766158 -18319374 + AT_rich Low_complexity Low_complexity 1 38 0 4038 206 40 69 chr5 184768094 184768431 -18317101 - L1MD1 LINE L1 -1 6241 5896 1972 119 16 33 chr5 184768431 184768734 -18316798 - AluSx SINE Alu -14 298 1 4038 206 40 69 chr5 184768734 184769452 -18316080 - L1MD1 LINE L1 -346 5896 5159 2304 101 0 0 chr5 184769452 184769760 -18315772 - AluSg SINE Alu -2 308 1 4038 206 40 69 chr5 184769760 184769961 -18315571 - L1MD1 LINE L1 -1083 5159 4954 2029 92 61 14 chr5 184769961 184770254 -18315278 - AluSq SINE Alu -6 307 1 4038 206 40 69 chr5 184770254 184770877 -18314655 - L1MD1 LINE L1 -1288 4954 4439 307 293 63 84 chr5 184771292 184771483 -18314049 + MIR SINE MIR 4 190 -72 27 29 0 0 chr5 184771860 184771894 -18313638 + AT_rich Low_complexity Low_complexity 1 34 0 278 170 0 0 chr5 184772051 184772098 -18313434 + MER5B DNA MER1_type 1 47 -131 240 211 35 0 chr5 184772099 184772156 -18313376 + (CATA)n Simple_repeat Simple_repeat 2 60 0 262 197 42 70 chr5 184772160 184772231 -18313301 - MER5B DNA MER1_type -60 118 50 250 313 133 39 chr5 184774200 184774328 -18311204 + MIR3 SINE MIR 21 160 -48 201 333 0 0 chr5 184774399 184774462 -18311070 + GA-rich Low_complexity Low_complexity 2 64 0 496 275 135 34 chr5 184774664 184774871 -18310661 - MIR SINE MIR -2 260 33 548 295 66 38 chr5 184776832 184777120 -18308412 + L2 LINE L2 3016 3311 -2 1547 223 98 23 chr5 184777866 184778336 -18307196 - MLT1D LTR MaLR 0 505 1 1307 245 56 97 chr5 184778338 184778882 -18306650 - MLT1D-int LTR MaLR -2 1733 877 3375 148 90 32 chr5 184778882 184779569 -18305963 - LTR8A LTR ERV1 0 727 1 1307 245 56 97 chr5 184779569 184779674 -18305858 - MLT1D-int LTR MaLR -858 877 769 1935 181 126 47 chr5 184779674 184780204 -18305328 + LTR49 LTR ERV1 1 572 -23 535 200 67 0 chr5 184780218 184780323 -18305209 - MLT1D-int LTR MaLR -599 772 661 4607 137 82 36 chr5 184780410 184781068 -18304464 - MER4D LTR ERV1 -9 894 267 193 29 29 29 chr5 184781068 184781103 -18304429 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1914 128 0 0 chr5 184781105 184781362 -18304170 - AluSq SINE Alu -25 288 32 4607 137 82 36 chr5 184781362 184781555 -18303977 - MER4D LTR ERV1 -636 267 1 1102 191 0 5 chr5 184781615 184781824 -18303708 - MLT1D-int LTR MaLR -765 606 399 986 185 10 24 chr5 184781815 184782020 -18303512 - MLT1D-int LTR MaLR -1169 202 1 * 1220 248 75 50 chr5 184782024 184782067 -18303465 - MLT1D LTR MaLR -4 501 461 2303 105 0 0 chr5 184782067 184782373 -18303159 + AluY SINE Alu 1 306 -5 1220 248 75 50 chr5 184782373 184782784 -18302748 - MLT1D LTR MaLR -44 461 36 594 345 84 0 chr5 184782930 184783217 -18302315 + L2 LINE L2 2472 2782 -532 2369 86 0 0 chr5 184783548 184783851 -18301681 - AluY SINE Alu -8 303 1 43 20 0 0 chr5 184784011 184784061 -18301471 + AT_rich Low_complexity Low_complexity 1 50 0 469 56 92 7 chr5 184784072 184784214 -18301318 + (TA)n Simple_repeat Simple_repeat 2 155 0 1760 156 13 16 chr5 184784568 184784875 -18300657 + AluSx SINE Alu 1 306 -6 265 367 91 0 chr5 184784909 184785108 -18300424 + L1ME LINE L1 5651 5867 -254 28 79 0 0 chr5 184785884 184785947 -18299585 + AT_rich Low_complexity Low_complexity 1 63 0 189 400 48 40 chr5 184786625 184786750 -18298782 + L2 LINE L2 3127 3252 -20 23 78 0 0 chr5 184786982 184787033 -18298499 + AT_rich Low_complexity Low_complexity 1 51 0 27 49 0 0 chr5 184787104 184787145 -18298387 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr5 184788143 184788171 -18297361 + AT_rich Low_complexity Low_complexity 1 28 0 2039 130 3 7 chr5 184788423 184788724 -18296808 - AluSg SINE Alu -10 300 1 428 287 74 8 chr5 184789238 184789437 -18296095 + MIR SINE MIR 51 262 0 225 292 110 7 chr5 184789686 184789840 -18295692 - L1 LINE L1 -2354 3792 3623 1258 161 0 82 chr5 184790321 184790588 -18294944 + L1M3 LINE L1 5447 5691 -480 26 30 0 0 chr5 184790755 184790788 -18294744 + AT_rich Low_complexity Low_complexity 1 33 0 1854 157 0 17 chr5 184791321 184791651 -18293881 + AluSx SINE Alu 4 312 0 40 49 0 0 chr5 184791736 184791797 -18293735 + AT_rich Low_complexity Low_complexity 1 61 0 225 224 0 20 chr5 184791864 184791913 -18293619 + A-rich Low_complexity Low_complexity 2 49 0 2322 104 0 0 chr5 184792244 184792541 -18292991 - AluSx SINE Alu -15 297 1 251 167 0 0 chr5 184792650 184792698 -18292834 - Charlie8 DNA MER1_type -998 1419 1372 1421 204 122 0 chr5 184792772 184793076 -18292456 + MLT1D LTR MaLR 102 442 -63 2344 103 0 0 chr5 184793216 184793518 -18292014 - AluSc SINE Alu -7 302 1 19214 180 24 28 chr5 184793571 184797922 -18287610 + L1PA10 LINE L1 617 4947 -1514 6126 91 18 17 chr5 184797934 184799289 -18286243 + L1PA10 LINE L1 5122 6475 -8 811 128 0 154 chr5 184799910 184800098 -18285434 + AluJb SINE Alu 134 292 -20 386 175 0 175 chr5 184800342 184800496 -18285036 + L1MEc LINE L1 58 184 -6212 2310 249 77 31 chr5 184800532 184801322 -18284210 + L1MEc LINE L1 363 1194 -5202 1708 193 3 3 chr5 184801322 184801633 -18283899 + AluJb SINE Alu 1 311 -1 2310 249 77 31 chr5 184801633 184801675 -18283857 + L1MEc LINE L1 1194 1233 -5163 234 184 0 79 chr5 184801739 184801815 -18283717 + L1MEc LINE L1 1250 1319 -4896 591 190 49 37 chr5 184801815 184801978 -18283554 + L1MEc LINE L1 1555 1719 -4677 2653 214 33 22 chr5 184803470 184804488 -18281044 - L1MB8 LINE L1 -187 5991 4969 913 142 22 77 chr5 184805003 184805186 -18280346 + AluJb SINE Alu 124 296 -16 1186 173 60 60 chr5 184805224 184805339 -18280193 - AluJo SINE Alu -58 254 140 441 0 0 0 chr5 184805339 184805388 -18280144 + (TG)n Simple_repeat Simple_repeat 2 50 0 1186 173 60 60 chr5 184805388 184805521 -18280011 - AluJo SINE Alu -171 141 6 522 152 0 30 chr5 184806755 184806854 -18278678 - L1MA7 LINE L1 -187 6104 6009 903 134 41 21 chr5 184806854 184807048 -18278484 + L1MA7 LINE L1 6093 6290 -1 1751 164 4 4 chr5 184807415 184807689 -18277843 + AluJo SINE Alu 11 284 -28 634 204 0 15 chr5 184807716 184807853 -18277679 + FLAM_C SINE Alu 7 141 -2 780 225 56 0 chr5 184808174 184808352 -18277180 + MER5A DNA MER1_type 1 188 -1 288 0 0 0 chr5 184809114 184809146 -18276386 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr5 184809649 184809672 -18275860 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr5 184811266 184811301 -18274231 + AT_rich Low_complexity Low_complexity 1 35 0 934 232 143 27 chr5 184811779 184812107 -18273425 - L1ME3A LINE L1 -8 6162 5797 617 249 41 40 chr5 184812251 184812651 -18272881 - LTR37B LTR ERV1 0 468 28 748 180 36 93 chr5 184813720 184813783 -18271749 - MER3 DNA MER1_type -25 184 119 2173 90 4 0 chr5 184813783 184814098 -18271434 + AluSc SINE Alu 1 316 0 748 180 36 93 chr5 184814098 184814227 -18271305 - MER3 DNA MER1_type -90 119 2 2514 154 37 0 chr5 184815050 184815453 -18270079 + MSTB LTR MaLR 2 419 -7 768 248 28 28 chr5 184815484 184815702 -18269830 + MER20 DNA MER1_type 2 219 0 2182 107 7 0 chr5 184817209 184817498 -18268034 - AluSg SINE Alu -14 296 6 1715 272 85 19 chr5 184817690 184818437 -18267095 - L1ME3A LINE L1 -5 6165 5356 4861 92 3 27 chr5 184818586 184819289 -18266243 - L1PA11 LINE L1 -2 6172 5487 320 325 182 20 chr5 184820185 184820321 -18265211 + L3 LINE CR1 1160 1273 -304 2396 69 0 19 chr5 184820321 184820638 -18264894 + AluY SINE Alu 1 311 0 320 325 182 20 chr5 184820638 184820803 -18264729 + L3 LINE CR1 1273 1510 -67 353 321 289 5 chr5 184821696 184821914 -18263618 - L3 LINE CR1 -5 1572 1293 21 57 0 0 chr5 184823095 184823130 -18262402 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 184823192 184823222 -18262310 + AT_rich Low_complexity Low_complexity 1 30 0 2265 115 0 0 chr5 184823528 184823833 -18261699 - AluSx SINE Alu -7 305 1 441 324 65 16 chr5 184824063 184824248 -18261284 - MIR SINE MIR -19 243 50 2492 57 0 0 chr5 184824711 184825012 -18260520 - AluY SINE Alu -10 301 1 2431 175 50 59 chr5 184825026 184825512 -18260020 - L1MD1 LINE L1 0 6242 5762 1863 152 14 0 chr5 184825512 184825802 -18259730 + AluSx SINE Alu 1 294 -18 2431 175 50 59 chr5 184825802 184825921 -18259611 - L1MD1 LINE L1 -480 5762 5643 28 61 0 0 chr5 184825930 184825979 -18259553 + AT_rich Low_complexity Low_complexity 1 49 0 2079 128 3 0 chr5 184826564 184826860 -18258672 - AluSp SINE Alu -16 297 1 223 202 24 24 chr5 184826926 184827010 -18258522 + (TATG)n Simple_repeat Simple_repeat 3 86 0 767 333 65 16 chr5 184827308 184827692 -18257840 - L2 LINE L2 0 3313 2911 293 227 61 30 chr5 184827993 184828104 -18257428 - L2 LINE L2 -406 2907 2794 297 323 98 38 chr5 184828139 184828272 -18257260 + MIR SINE MIR 3 143 -119 1962 169 31 8 chr5 184828278 184828479 -18257053 - LOR1b LTR ERV1 0 461 247 287 65 22 0 chr5 184828479 184828525 -18257007 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1962 169 31 8 chr5 184828525 184828683 -18256849 - LOR1b LTR ERV1 -214 247 94 1975 128 0 3 chr5 184829116 184829404 -18256128 - AluSq SINE Alu -13 300 14 1396 177 86 73 chr5 184829950 184830335 -18255197 - MLT1B LTR MaLR 0 390 1 218 420 11 28 chr5 184830734 184830910 -18254622 + CT-rich Low_complexity Low_complexity 1 173 0 1425 142 0 17 chr5 184832053 184832286 -18253246 - AluSg/x SINE Alu 0 312 84 663 171 0 89 chr5 184832369 184832478 -18253054 + FLAM_A SINE Alu 1 95 -207 2088 131 3 7 chr5 184832478 184832783 -18252749 - AluSq SINE Alu -9 304 1 663 171 0 89 chr5 184832783 184832819 -18252713 + FLAM_A SINE Alu 95 133 -169 1001 148 76 0 chr5 184832958 184833168 -18252364 - L1MA5A LINE L1 0 6297 6072 311 264 0 24 chr5 184833174 184833299 -18252233 + (CAGTA)n Simple_repeat Simple_repeat 3 124 0 1218 116 17 0 chr5 184833399 184833572 -18251960 + AluSg/x SINE Alu 134 309 -1 515 280 133 45 chr5 184834632 184834986 -18250546 - HAL1 LINE L1 0 2507 2123 4314 80 71 13 chr5 184834988 184835045 -18250487 + PABL_A LTR ERV1 2 54 -606 1980 133 7 3 chr5 184835045 184835339 -18250193 - AluSx SINE Alu -17 295 1 4314 80 71 13 chr5 184835339 184835904 -18249628 + PABL_A LTR ERV1 54 660 0 611 324 84 0 chr5 184836602 184836827 -18248705 + MIR SINE MIR 11 254 -8 261 322 35 0 chr5 184837114 184837229 -18248303 + L1M4 LINE L1 2890 3008 -3138 1593 100 74 44 chr5 184837313 184837613 -18247919 - AluSg SINE Alu 0 313 6 1024 304 162 38 chr5 184837617 184838758 -18246774 + L1M4 LINE L1 3064 4346 -1800 637 187 81 0 chr5 184838770 184838893 -18246639 - FLAM_C SINE Alu 0 133 1 284 190 50 60 chr5 184839227 184839327 -18246205 + L1M4 LINE L1 4931 5029 -1117 3755 237 87 22 chr5 184839465 184840829 -18244703 + L1ME LINE L1 3754 5205 -941 1141 211 62 80 chr5 184840834 184841187 -18244345 + MER39 LTR ERV1 1 520 -187 2107 96 7 3 chr5 184841187 184841480 -18244052 - AluSg1 SINE Alu -15 294 1 1141 211 62 80 chr5 184841480 184841656 -18243876 + MER39 LTR ERV1 520 698 -9 319 313 107 8 chr5 184841825 184841956 -18243576 + MIR SINE MIR 75 218 -44 294 258 169 0 chr5 184842873 184842962 -18242570 - HAL1 LINE L1 -153 2354 2251 244 323 0 40 chr5 184843488 184843587 -18241945 - HAL1 LINE L1 -583 1924 1830 347 245 118 0 chr5 184843658 184843760 -18241772 - HAL1 LINE L1 -834 1673 1560 328 217 14 0 chr5 184843775 184843844 -18241688 - HAL1 LINE L1 -997 1510 1441 383 288 59 0 chr5 184843847 184844000 -18241532 - HAL1 LINE L1 -1112 1395 1234 401 284 71 0 chr5 184844106 184844247 -18241285 + MIR SINE MIR 112 262 0 247 177 32 48 chr5 184844262 184844324 -18241208 - L2 LINE L2 0 3313 3253 814 271 63 42 chr5 184844825 184845293 -18240239 + L1ME LINE L1 5293 5772 -349 470 260 167 20 chr5 184845311 184845515 -18240017 + MIR SINE MIR 15 248 -14 285 244 77 39 chr5 184845568 184845646 -18239886 - L2 LINE L2 -37 3276 3196 366 340 173 6 chr5 184845714 184846070 -18239462 + L2 LINE L2 2644 3057 -215 2086 112 11 0 chr5 184846285 184846571 -18238961 - AluSc SINE Alu -20 289 1 419 210 6 4 chr5 184846590 184846683 -18238849 + AluJ/FLAM SINE Alu 2 78 -224 2216 211 8 35 chr5 184847983 184848505 -18237027 - MER34 LTR ERV1 -9 533 26 2277 141 19 0 chr5 184849160 184849528 -18236004 - THE1C LTR MaLR 0 375 1 670 242 17 0 chr5 184849532 184849710 -18235822 - THE1C-int LTR MaLR -4 1576 1396 21 0 0 0 chr5 184850271 184850292 -18235240 + AT_rich Low_complexity Low_complexity 1 21 0 1955 138 0 26 chr5 184851232 184851543 -18233989 + AluSx SINE Alu 9 311 -1 1029 83 0 8 chr5 184852727 184852859 -18232673 - AluSq/x SINE Alu -182 131 1 758 172 17 23 chr5 184853696 184853870 -18231662 - L1MD3 LINE L1 -2 7993 7821 255 279 164 14 chr5 184853999 184854218 -18231314 - L1M4 LINE L1 -1538 4608 4357 22 0 0 0 chr5 184854281 184854303 -18231229 + AT_rich Low_complexity Low_complexity 1 22 0 367 233 142 28 chr5 184854447 184854623 -18230909 - L1M4 LINE L1 -2091 4055 3860 295 267 75 0 chr5 184854665 184854785 -18230747 - L1M4 LINE L1 -2694 3452 3324 919 179 123 19 chr5 184855901 184856169 -18229363 + MER33 DNA MER1_type 1 296 -28 247 293 75 28 chr5 184857512 184857618 -18227914 - L3 LINE CR1 -196 1381 1271 414 359 196 7 chr5 184857727 184858136 -18227396 + L2 LINE L2 2271 2756 -558 2162 97 10 3 chr5 184859181 184859480 -18226052 + AluSp SINE Alu 1 301 -12 233 211 184 13 chr5 184859643 184859719 -18225813 + L2 LINE L2 2888 2976 -337 814 156 0 15 chr5 184859754 184859889 -18225643 + FLAM_C SINE Alu 1 133 0 291 148 82 16 chr5 184861678 184861739 -18223793 + U3 snRNA snRNA 1 65 -152 1388 173 97 4 chr5 184862209 184862487 -18223045 - AluJb SINE Alu -6 306 3 9143 120 45 47 chr5 184862721 184863033 -18222499 - THE1C-int LTR MaLR -1 1579 1268 2027 146 0 0 chr5 184863033 184863328 -18222204 - AluSx SINE Alu -17 295 1 9143 120 45 47 chr5 184863328 184864597 -18220935 - THE1C-int LTR MaLR -312 1268 1 2000 132 52 19 chr5 184864597 184864960 -18220572 - THE1C LTR MaLR 0 375 1 356 275 6 75 chr5 184865089 184865249 -18220283 + MIR SINE MIR 114 262 0 21 0 0 0 chr5 184865303 184865324 -18220208 + AT_rich Low_complexity Low_complexity 1 21 0 314 361 24 18 chr5 184865541 184865710 -18219822 + L2 LINE L2 3133 3302 -11 195 346 13 13 chr5 184867668 184867746 -18217786 - MIR3 SINE MIR -126 82 5 792 198 49 12 chr5 184868389 184868551 -18216981 - MER5A DNA MER1_type -21 168 1 23 0 0 0 chr5 184869708 184869731 -18215801 + AT_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr5 184870629 184870663 -18214869 + (TC)n Simple_repeat Simple_repeat 2 35 0 707 316 93 34 chr5 184871471 184871945 -18213587 + MLT1K LTR MaLR 87 588 0 1053 166 96 13 chr5 184872832 184873061 -18212471 + L1M4c LINE L1 522 769 -5615 3588 118 23 74 chr5 184873209 184873937 -18211595 + L1M4c LINE L1 771 1461 -4923 630 232 216 42 chr5 184874085 184874303 -18211229 - MLT1G1 LTR MaLR 0 595 300 1747 158 140 28 chr5 184874357 184874757 -18210775 + MER31B LTR ERV1 1 445 -21 543 240 40 10 chr5 184874767 184874957 -18210575 - MLT1G1 LTR MaLR -372 183 3 2187 115 0 3 chr5 184875430 184875726 -18209806 - AluSc SINE Alu -14 295 1 210 175 25 0 chr5 184876510 184876550 -18208982 + CT-rich Low_complexity Low_complexity 4 44 0 1430 172 62 52 chr5 184877414 184877628 -18207904 + AluJb SINE Alu 1 220 -92 2356 95 3 0 chr5 184877628 184877934 -18207598 + AluSp SINE Alu 1 307 -6 1430 172 62 52 chr5 184877934 184878009 -18207523 + AluJb SINE Alu 220 293 -19 557 168 71 35 chr5 184878022 184878135 -18207397 + FLAM_C SINE Alu 1 117 -26 2240 91 21 0 chr5 184878152 184878439 -18207093 + AluSc SINE Alu 1 293 -16 21 0 0 0 chr5 184878995 184879016 -18206516 + AT_rich Low_complexity Low_complexity 1 21 0 255 182 0 0 chr5 184879191 184879235 -18206297 - MARNA DNA Mariner -94 492 449 264 283 102 18 chr5 184879244 184879410 -18206122 + MARNA DNA Mariner 168 347 -239 2313 213 97 36 chr5 184879487 184880470 -18205062 - L1ME3 LINE L1 -81 6876 5830 401 245 58 0 chr5 184880479 184880618 -18204914 - L1M4 LINE L1 -965 5181 5035 638 225 91 59 chr5 184880621 184881102 -18204430 - L1ME3 LINE L1 -4887 1536 1227 2371 95 0 0 chr5 184881149 184881444 -18204088 + AluY SINE Alu 2 296 -15 1280 145 127 67 chr5 184882491 184882622 -18202910 + AluJo SINE Alu 13 135 -177 2204 103 3 7 chr5 184882622 184882923 -18202609 + AluSg SINE Alu 1 300 -10 1280 145 127 67 chr5 184882923 184883074 -18202458 + AluJo SINE Alu 135 312 0 23 0 0 0 chr5 184883705 184883728 -18201804 + AT_rich Low_complexity Low_complexity 1 23 0 2161 101 0 0 chr5 184884829 184885106 -18200426 + AluSc SINE Alu 17 293 -16 659 265 19 9 chr5 184885265 184885480 -18200052 - L1ME1 LINE L1 -5 6161 5945 1822 223 57 2 chr5 184885481 184885934 -18199598 - L1ME1 LINE L1 -324 5842 5365 1028 196 13 40 chr5 184886448 184886673 -18198859 + MER20 DNA MER1_type 1 219 0 2034 111 14 10 chr5 184886784 184887073 -18198459 + AluSg SINE Alu 1 290 -20 2295 85 3 10 chr5 184887458 184887772 -18197760 - AluSp SINE Alu 0 313 1 552 157 0 0 chr5 184887879 184887962 -18197570 - AluJ/FLAM SINE Alu -226 86 4 322 159 111 0 chr5 184888380 184888443 -18197089 - 7SLRNA srpRNA srpRNA -234 86 17 262 251 43 6 chr5 184888442 184888537 -18196995 - MLT1L LTR MaLR -305 267 110 * 1416 137 140 17 chr5 184888544 184888651 -18196881 - MER44D DNA MER2_type -1882 609 517 1824 138 46 35 chr5 184888651 184889022 -18196510 + THE1C LTR MaLR 1 375 0 1416 137 140 17 chr5 184889022 184889214 -18196318 - MER44D DNA MER2_type -1974 517 3 1627 167 43 0 chr5 184889277 184889558 -18195974 + AluJb SINE Alu 1 293 -19 1402 218 73 39 chr5 184889648 184889961 -18195571 + MSTD LTR MaLR 1 331 -65 1459 119 14 9 chr5 184889961 184890179 -18195353 - AluSq SINE Alu -50 263 45 1402 218 73 39 chr5 184890179 184890246 -18195286 + MSTD LTR MaLR 331 394 -2 243 0 0 0 chr5 184890315 184890342 -18195190 + (T)n Simple_repeat Simple_repeat 1 27 0 596 133 11 0 chr5 184890392 184890482 -18195050 - AluJb SINE Alu -23 289 199 2302 102 0 0 chr5 184890585 184890889 -18194643 - AluSx SINE Alu -8 304 1 450 214 308 31 chr5 184890892 184891116 -18194416 - HAL1 LINE L1 -1429 1078 793 1934 141 3 13 chr5 184891123 184891421 -18194111 + AluJo SINE Alu 1 295 -17 606 148 0 20 chr5 184891438 184891539 -18193993 + AluJ/FLAM SINE Alu 1 99 -213 189 176 0 0 chr5 184891573 184891607 -18193925 + MER5B DNA MER1_type 1 34 -144 587 270 11 11 chr5 184891634 184891812 -18193720 + MER5B DNA MER1_type 1 178 0 451 200 148 30 chr5 184891846 184891981 -18193551 + MER5A DNA MER1_type 1 151 -38 2302 90 3 3 chr5 184892020 184892319 -18193213 - AluSx SINE Alu -13 299 1 1757 136 11 7 chr5 184892624 184892896 -18192636 - AluJb SINE Alu -18 294 22 2195 64 46 3 chr5 184893014 184893296 -18192236 + AluY SINE Alu 1 294 -17 506 223 45 9 chr5 184895360 184895472 -18190060 + L2 LINE L2 3182 3297 -16 588 234 128 35 chr5 184895493 184895678 -18189854 + L1ME3A LINE L1 5558 5769 -401 1537 163 81 11 chr5 184895678 184895961 -18189571 + AluJb SINE Alu 1 303 -9 588 234 128 35 chr5 184895961 184896001 -18189531 + L1ME3A LINE L1 5769 5804 -366 908 161 21 57 chr5 184896070 184896263 -18189269 + MER20 DNA MER1_type 34 219 0 619 255 71 68 chr5 184896269 184896563 -18188969 + L1ME3A LINE L1 5808 6102 -68 573 137 34 8 chr5 184897152 184897328 -18188204 + MER51A LTR ERV1 2 230 -404 252 109 22 22 chr5 184897330 184897376 -18188156 + MER51A LTR ERV1 179 224 -410 * 1092 118 83 29 chr5 184897373 184897577 -18187955 + MER51A LTR ERV1 420 634 0 342 138 149 11 chr5 184897632 184897726 -18187806 + MER113 DNA MER1_type? 64 170 -351 280 222 25 37 chr5 184898012 184898093 -18187439 + MER113 DNA MER1_type? 405 484 -37 2167 105 7 0 chr5 184898957 184899252 -18186280 + AluSg SINE Alu 1 297 -13 5341 116 46 54 chr5 184899298 184899531 -18186001 + Tigger1 DNA MER2_type 1 235 -2183 2039 87 25 4 chr5 184899531 184899807 -18185725 + AluSc SINE Alu 1 282 -27 5341 116 46 54 chr5 184899807 184900602 -18184930 + Tigger1 DNA MER2_type 235 1020 -1398 912 143 0 0 chr5 184900770 184900896 -18184636 - AluY SINE Alu -185 126 1 1315 164 133 0 chr5 184903811 184904074 -18181458 - AluSx SINE Alu -2 300 3 333 141 14 42 chr5 184904074 184904145 -18181387 - THE1B LTR MaLR 0 364 296 1425 95 67 40 chr5 184904234 184904487 -18181045 - THE1B LTR MaLR -104 260 1 516 293 44 0 chr5 184904747 184905017 -18180515 + L1MC/D LINE L1 5005 5286 -860 1400 190 4 16 chr5 184905616 184905869 -18179663 + AluJo SINE Alu 2 251 -61 329 218 51 61 chr5 184905916 184906134 -18179398 + L1MC/D LINE L1 5291 5507 -719 1442 156 0 4 chr5 184906166 184906397 -18179135 - AluSg/x SINE Alu -1 309 80 1441 238 108 14 chr5 184907212 184907719 -18177813 - MLT1F1 LTR MaLR -3 564 5 460 374 98 38 chr5 184907981 184908299 -18177233 + L2 LINE L2 2925 3261 -11 286 234 0 0 chr5 184908636 184908713 -18176819 - L1ME1 LINE L1 -4 6162 6086 848 173 0 0 chr5 184909102 184909235 -18176297 + FLAM_A SINE Alu 1 133 0 355 328 33 25 chr5 184909481 184909603 -18175929 - L2 LINE L2 0 3313 3191 192 341 176 50 chr5 184909666 184910264 -18175268 + L2 LINE L2 2166 2838 -476 2089 104 7 17 chr5 184911240 184911538 -18173994 + AluSg SINE Alu 2 296 -14 1878 149 10 0 chr5 184911708 184912010 -18173522 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr5 184912266 184912289 -18173243 + AT_rich Low_complexity Low_complexity 1 23 0 653 172 7 35 chr5 184912494 184912639 -18172893 + MER46A DNA MER2_type 11 151 -85 444 291 93 4 chr5 184912764 184913022 -18172510 + L1ME LINE L1 3942 4222 -1924 295 290 25 12 chr5 184913100 184913262 -18172270 + L1ME LINE L1 4352 4515 -1631 768 239 137 5 chr5 184913288 184913485 -18172047 - MIR SINE MIR -24 238 16 357 246 134 35 chr5 184913485 184913769 -18171763 + L1ME LINE L1 4533 4844 -1302 345 255 19 9 chr5 184913857 184913963 -18171569 + (TA)n Simple_repeat Simple_repeat 2 108 0 480 316 104 27 chr5 184914184 184914558 -18170974 + L1ME LINE L1 5257 5659 -511 693 157 81 103 chr5 184914560 184914690 -18170842 + MER58A DNA MER1_type 6 130 -2290 2177 137 0 3 chr5 184914690 184915003 -18170529 + AluSx SINE Alu 1 312 0 693 157 81 103 chr5 184915003 184915095 -18170437 + MER58A DNA MER1_type 130 223 -1 794 209 43 0 chr5 184915627 184915790 -18169742 + FAM SINE Alu 3 172 -3 492 331 77 18 chr5 184915974 184916312 -18169220 - L1M4 LINE L1 -1077 5069 4712 372 318 87 51 chr5 184916435 184916746 -18168786 - L1M4 LINE L1 -1726 4420 4099 819 131 8 0 chr5 184917546 184917676 -18167856 + FLAM_C SINE Alu 3 133 0 1296 157 26 4 chr5 184918534 184918764 -18166768 - MER46A DNA MER2_type 0 236 2 1173 190 20 5 chr5 184919166 184919361 -18166171 + AluJo SINE Alu 1 198 -114 213 65 0 0 chr5 184919401 184919432 -18166100 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 617 195 79 69 chr5 184919577 184919895 -18165637 + L1MC5 LINE L1 7609 7929 -32 2231 100 3 7 chr5 184920028 184920338 -18165194 - AluSg SINE Alu -1 309 1 1733 123 89 11 chr5 184920351 184920620 -18164912 - AluSq SINE Alu -23 290 1 21 0 0 0 chr5 184920773 184920794 -18164738 + AT_rich Low_complexity Low_complexity 1 21 0 323 174 0 204 chr5 184921090 184921222 -18164310 - MIR3 SINE MIR -12 196 92 * 1097 289 177 60 chr5 184921175 184921776 -18163756 - L2 LINE L2 -1829 1485 737 2288 123 7 0 chr5 184921776 184922085 -18163447 + AluSx SINE Alu 1 311 -1 1097 289 177 60 chr5 184922085 184922411 -18163121 - L2 LINE L2 -2577 737 450 1128 84 79 44 chr5 184922419 184922622 -18162910 + MER30 DNA MER1_type 1 210 -20 513 320 66 22 chr5 184922649 184922830 -18162702 - L2 LINE L2 -2851 463 275 3935 140 62 99 chr5 184922928 184923845 -18161687 - MER21A LTR ERV1 0 931 49 1687 161 57 4 chr5 184923845 184924124 -18161408 + AluJb SINE Alu 5 298 -14 3935 140 62 99 chr5 184924124 184924158 -18161374 - MER21A LTR ERV1 -882 49 15 243 318 269 14 chr5 184924835 184925058 -18160474 - L2 LINE L2 -1 3271 2992 * 246 352 69 84 chr5 184925056 184925508 -18160024 - L2 LINE L2 -1 3271 2827 184 42 0 0 chr5 184925623 184925647 -18159885 + (TTTTA)n Simple_repeat Simple_repeat 2 170 0 716 169 73 7 chr5 184925647 184925783 -18159749 - AluSg/x SINE Alu -1 305 138 1292 126 63 25 chr5 184926111 184926350 -18159182 + MER1B DNA MER1_type 128 335 -4 22 35 0 0 chr5 184926403 184926432 -18159100 + AT_rich Low_complexity Low_complexity 1 29 0 2310 100 0 6 chr5 184926645 184926956 -18158576 + AluSg SINE Alu 1 309 -1 22 35 0 0 chr5 184927066 184927095 -18158437 + AT_rich Low_complexity Low_complexity 1 29 0 1220 279 105 58 chr5 184927529 184928329 -18157203 + HAL1 LINE L1 21 858 -1649 309 204 87 10 chr5 184928334 184928437 -18157095 + HAL1 LINE L1 1202 1312 -1195 1425 98 127 0 chr5 184928552 184928757 -18156775 + AluSg/x SINE Alu 73 303 -9 656 333 78 52 chr5 184928844 184929751 -18155781 + L2 LINE L2 2376 3305 -8 23 54 0 0 chr5 184930084 184930121 -18155411 + AT_rich Low_complexity Low_complexity 1 37 0 36 23 0 0 chr5 184930937 184930980 -18154552 + AT_rich Low_complexity Low_complexity 1 43 0 1805 139 36 3 chr5 184931178 184931480 -18154052 - AluSx SINE Alu 0 312 1 234 249 55 39 chr5 184931518 184931699 -18153833 - L1M4 LINE L1 -2744 3900 3717 809 244 5 9 chr5 184931702 184931915 -18153617 - L1M4 LINE L1 -5781 761 550 1715 133 47 36 chr5 184931924 184932225 -18153307 - AluSx SINE Alu -1 311 8 2117 115 13 13 chr5 184932232 184932536 -18152996 - AluSx SINE Alu -8 304 1 1947 136 3 10 chr5 184933563 184933865 -18151667 - AluSx SINE Alu -12 300 1 2226 102 0 34 chr5 184934004 184934326 -18151206 - AluSx SINE Alu -1 311 1 213 39 0 0 chr5 184939060 184939086 -18146446 + (A)n Simple_repeat Simple_repeat 1 26 0 209 293 10 61 chr5 184939099 184939198 -18146334 - MER5A DNA MER1_type -84 105 12 245 233 203 0 chr5 184939242 184939375 -18146157 + HAL1 LINE L1 2142 2301 -206 408 223 204 0 chr5 184939532 184939635 -18145897 + FLAM_A SINE Alu 1 124 -9 2226 99 0 14 chr5 184939635 184939929 -18145603 - AluSx SINE Alu -22 290 1 570 193 0 53 chr5 184939929 184940043 -18145489 - MIR SINE MIR -112 150 43 2957 201 77 20 chr5 184940305 184941137 -18144395 - L1MB8 LINE L1 -26 6152 5274 24 0 0 0 chr5 184942070 184942094 -18143438 + AT_rich Low_complexity Low_complexity 1 24 0 1077 282 63 21 chr5 184942637 184943158 -18142374 - HAL1 LINE L1 -354 2153 1611 1296 253 65 97 chr5 184943179 184943525 -18142007 + MER21B LTR ERV1 3 359 -504 2253 103 0 3 chr5 184943525 184943826 -18141706 + AluSg SINE Alu 1 300 -10 1296 253 65 97 chr5 184943826 184944231 -18141301 + MER21B LTR ERV1 359 730 -133 416 265 38 15 chr5 184944283 184944415 -18141117 + MER21B LTR ERV1 605 739 -124 1673 138 51 0 chr5 184944471 184944725 -18140807 + AluSx SINE Alu 1 267 -45 2325 96 3 6 chr5 184945782 184946096 -18139436 - AluSp SINE Alu 0 313 1 855 118 0 8 chr5 184946109 184946228 -18139304 - FLAM_C SINE Alu -25 118 1 2138 101 0 4 chr5 184946291 184946567 -18138965 + AluSx SINE Alu 1 275 -37 390 319 98 23 chr5 184947456 184947722 -18137810 + LTR67 LTR ERVL 2 287 -270 1995 106 30 13 chr5 184948111 184948412 -18137120 - AluSc SINE Alu -3 306 1 326 137 0 0 chr5 184948600 184948651 -18136881 - AluJo SINE Alu -13 289 239 637 148 79 0 chr5 184948653 184948754 -18136778 - AluJo SINE Alu -112 200 92 1063 167 50 31 chr5 184948760 184948982 -18136550 - AluJo SINE Alu -11 301 76 717 172 15 22 chr5 184949789 184949923 -18135609 - FLAM_C SINE Alu -10 133 1 306 0 0 0 chr5 184950074 184950108 -18135424 + (TG)n Simple_repeat Simple_repeat 2 35 0 739 282 17 30 chr5 184950316 184950550 -18134982 + MIR SINE MIR 6 236 -26 260 318 61 30 chr5 184950579 184950711 -18134821 + MIR3 SINE MIR 72 207 -1 24 53 0 0 chr5 184951841 184951879 -18133653 + AT_rich Low_complexity Low_complexity 1 38 0 929 168 133 15 chr5 184952132 184952328 -18133204 + MER20 DNA MER1_type 1 219 0 536 246 67 56 chr5 184952417 184952596 -18132936 + MIR SINE MIR 48 228 -34 252 316 140 9 chr5 184952766 184952880 -18132652 + MIR SINE MIR 103 231 -31 2278 112 0 3 chr5 184953133 184953445 -18132087 + AluSx SINE Alu 1 311 -1 2310 112 3 0 chr5 184953486 184953791 -18131741 - AluSq SINE Alu -7 306 1 1611 148 8 0 chr5 184954404 184954647 -18130885 - AluSx SINE Alu -67 245 1 796 192 87 17 chr5 184956261 184956433 -18129099 + AluJb SINE Alu 90 273 -39 34 42 0 0 chr5 184956433 184956481 -18129051 + AT_rich Low_complexity Low_complexity 1 48 0 318 204 149 33 chr5 184956495 184956676 -18128856 + HAL1b LINE L1 1188 1343 -5 454 297 163 33 chr5 184957337 184957854 -18127678 + L2 LINE L2 2722 3302 -11 1172 189 26 108 chr5 184958017 184958318 -18127214 - AluJb SINE Alu 0 326 52 2320 116 3 0 chr5 184958318 184958619 -18126913 + AluSx SINE Alu 1 302 -10 1172 189 26 108 chr5 184958619 184958668 -18126864 - AluJb SINE Alu -274 52 1 26 30 0 0 chr5 184958864 184958897 -18126635 + AT_rich Low_complexity Low_complexity 1 33 0 604 227 54 63 chr5 184959247 184959339 -18126193 - L1MC5 LINE L1 -186 7775 7684 2224 120 0 7 chr5 184959339 184959648 -18125884 + AluSx SINE Alu 1 307 -5 604 227 54 63 chr5 184959648 184959886 -18125646 - L1MC5 LINE L1 -277 7684 7448 1134 162 194 12 chr5 184959922 184960175 -18125357 - AluJo SINE Alu -2 300 2 465 209 9 0 chr5 184960180 184960285 -18125247 - L1MC5 LINE L1 -514 7447 7342 441 294 227 52 chr5 184960294 184960538 -18124994 - L2 LINE L2 -771 2543 2343 1639 167 44 34 chr5 184960538 184960831 -18124701 + AluJb SINE Alu 3 298 -14 441 294 227 52 chr5 184960831 184961187 -18124345 - L2 LINE L2 -971 2343 2051 2155 91 14 3 chr5 184961187 184961473 -18124059 + AluSc SINE Alu 1 289 -20 441 294 227 52 chr5 184961473 184961861 -18123671 - L2 LINE L2 -1263 2051 1381 523 301 49 63 chr5 184962679 184963151 -18122381 - L2 LINE L2 -39 3274 2737 520 159 71 63 chr5 184963154 184963280 -18122252 - MLT1E2 LTR MaLR -445 181 55 259 267 0 78 chr5 184963715 184963805 -18121727 - L2 LINE L2 0 3313 3231 226 325 123 12 chr5 184963914 184964077 -18121455 + MIR SINE MIR 49 229 -33 324 175 98 137 chr5 184964083 184964266 -18121266 + MER69 DNA AcHobo 2 2526 0 428 299 175 11 chr5 184964440 184964771 -18120761 - L1ME4a LINE L1 -123 5998 5606 1443 196 128 6 chr5 184964771 184965124 -18120408 - MSTD LTR MaLR 0 396 1 428 299 175 11 chr5 184965124 184965140 -18120392 - L1ME4a LINE L1 -515 5606 5594 1988 135 0 0 chr5 184965255 184965565 -18119967 - AluSx SINE Alu 0 310 1 411 335 26 20 chr5 184966437 184966589 -18118943 - MIR SINE MIR -76 186 34 1933 198 23 73 chr5 184966727 184967258 -18118274 + MLT1D LTR MaLR 1 504 -1 757 228 0 0 chr5 184967558 184967707 -18117825 + FRAM SINE Alu 6 154 -22 222 216 39 0 chr5 184967711 184967762 -18117770 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 844 131 15 0 chr5 184968301 184968431 -18117101 - AluSc SINE Alu -15 294 163 1730 158 14 7 chr5 184968698 184968982 -18116550 - AluJb SINE Alu -26 286 1 216 97 0 0 chr5 184969001 184969032 -18116500 + (TA)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr5 184969157 184969192 -18116340 + AT_rich Low_complexity Low_complexity 1 35 0 2239 102 0 3 chr5 184971715 184972009 -18113523 - AluSx SINE Alu -19 293 1 245 29 29 0 chr5 184972582 184972616 -18112916 + (ATG)n Simple_repeat Simple_repeat 1 35 0 2276 228 14 32 chr5 184972617 184973239 -18112293 - MER90 LTR ERV1 -3 611 1 525 254 207 9 chr5 184973262 184973475 -18112057 - MIR SINE MIR -4 258 4 180 77 0 0 chr5 184973914 184973940 -18111592 - MIR SINE MIR -207 55 30 275 299 98 49 chr5 184973983 184974147 -18111385 + MIR SINE MIR 2 173 -89 1854 154 3 3 chr5 184974366 184974659 -18110873 - AluJo SINE Alu -19 293 1 904 209 33 28 chr5 184974980 184975191 -18110341 - MER20 DNA MER1_type 0 219 8 260 350 81 16 chr5 184975191 184975314 -18110218 + L2 LINE L2 3183 3313 0 268 303 15 0 chr5 184975444 184975510 -18110022 + L2 LINE L2 3198 3264 -8 273 340 118 49 chr5 184975656 184975800 -18109732 + L2 LINE L2 3119 3272 0 284 292 21 62 chr5 184977359 184977503 -18108029 + L2 LINE L2 2944 3081 -191 465 279 99 17 chr5 184977542 184977714 -18107818 + L3 LINE CR1 986 1171 -406 31 0 0 0 chr5 184977933 184977964 -18107568 + AT_rich Low_complexity Low_complexity 1 31 0 231 114 0 0 chr5 184977965 184978000 -18107532 + (TCCC)n Simple_repeat Simple_repeat 1 35 0 1577 197 14 0 chr5 184978000 184978284 -18107248 - AluJb SINE Alu -21 291 4 28 29 0 0 chr5 184978303 184978338 -18107194 + AT_rich Low_complexity Low_complexity 1 35 0 208 284 62 12 chr5 184978486 184978567 -18106965 + L3 LINE CR1 1230 1314 -263 22 35 0 0 chr5 184978670 184978699 -18106833 + AT_rich Low_complexity Low_complexity 1 29 0 291 93 0 0 chr5 184978898 184978941 -18106591 + (CA)n Simple_repeat Simple_repeat 2 44 0 301 261 22 22 chr5 184978947 184978995 -18106537 + L1MC4 LINE L1 6612 6662 -1380 2097 108 54 38 chr5 184978995 184979364 -18106168 + THE1C LTR MaLR 1 375 0 301 261 22 22 chr5 184979364 184979407 -18106125 + L1MC4 LINE L1 6661 6703 -1339 207 203 0 0 chr5 184979420 184979489 -18106043 + (TA)n Simple_repeat Simple_repeat 2 70 0 229 280 13 13 chr5 184979675 184979750 -18105782 + L3 LINE CR1 1477 1551 -26 515 314 47 12 chr5 184979781 184979953 -18105579 + MER5B DNA MER1_type 1 178 0 2013 121 7 27 chr5 184982163 184982461 -18103071 + AluSx SINE Alu 1 292 -20 2188 104 6 25 chr5 184982658 184982974 -18102558 + AluSq SINE Alu 3 312 -1 2967 158 46 87 chr5 184983344 184984065 -18101467 - LTR8 LTR ERV1 0 691 1 21 0 0 0 chr5 184984887 184984908 -18100624 + AT_rich Low_complexity Low_complexity 1 21 0 56 48 0 0 chr5 184985121 184985205 -18100327 + AT_rich Low_complexity Low_complexity 1 84 0 256 271 0 0 chr5 184985221 184985291 -18100241 + MIR SINE MIR 190 259 -3 2051 139 0 7 chr5 184985582 184985884 -18099648 - AluSx SINE Alu -7 305 6 397 340 65 16 chr5 184986117 184986302 -18099230 - MIR SINE MIR -19 243 50 2543 53 0 0 chr5 184986765 184987065 -18098467 - AluY SINE Alu -11 300 1 1040 204 25 4 chr5 184987079 184987324 -18098208 - L1MD1 LINE L1 0 6242 5993 22 0 0 0 chr5 184987567 184987589 -18097943 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr5 184987829 184987859 -18097673 + AT_rich Low_complexity Low_complexity 1 30 0 2498 130 85 11 chr5 184987917 184988362 -18097170 - MER9 LTR ERVK 0 511 34 1942 142 49 25 chr5 184988811 184989177 -18096355 - THE1C LTR MaLR 0 375 1 542 344 26 0 chr5 184989247 184989442 -18096090 + MIR SINE MIR 49 248 -14 2437 74 0 0 chr5 184991608 184991918 -18093614 + AluY SINE Alu 1 310 -1 522 163 170 78 chr5 184992700 184992853 -18092679 + AluJb SINE Alu 128 294 -18 313 329 89 17 chr5 184992897 184993256 -18092276 - L1 LINE L1 -2215 3931 3547 1786 133 0 11 chr5 184993337 184993608 -18091924 - AluSx SINE Alu -7 305 38 444 317 130 38 chr5 184993884 184994329 -18091203 + L2 LINE L2 2825 3310 -3 1432 219 59 8 chr5 185047772 185048128 -18037404 + MLT1B LTR MaLR 1 374 -16 310 267 54 74 chr5 185049301 185049607 -18035925 + L1MC5 LINE L1 7310 7810 -151 469 244 83 50 chr5 185049947 185050189 -18035343 + Charlie8 DNA MER1_type 1 250 -2167 387 270 71 8 chr5 185050512 185050638 -18034894 + MIR SINE MIR 103 236 -26 623 268 149 87 chr5 185050820 185051545 -18033987 + LTR41 LTR ERVL 1 770 -3 391 369 6 11 chr5 185051749 185051925 -18033607 + MLT1K LTR MaLR 138 312 -276 2164 98 3 38 chr5 185051980 185052296 -18033236 - AluSx SINE Alu -7 305 1 2173 278 91 17 chr5 185053206 185054438 -18031094 - L1ME2 LINE L1 -30 6134 4801 2251 57 4 0 chr5 185055188 185055503 -18030029 + AluY SINE Alu 1 316 0 481 288 8 0 chr5 185055634 185055759 -18029773 - MIR SINE MIR -13 249 124 278 350 45 34 chr5 185058364 185058541 -18026991 + L2 LINE L2 2879 3057 -256 383 0 21 0 chr5 185058597 185058644 -18026888 + (TG)n Simple_repeat Simple_repeat 1 48 0 483 280 67 20 chr5 185058732 185058882 -18026650 - MIR SINE MIR 0 262 106 180 0 0 0 chr5 185059087 185059107 -18026425 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2046 86 4 11 chr5 185059111 185059390 -18026142 - AluY SINE Alu -34 277 1 649 227 0 0 chr5 185059473 185059605 -18025927 - FLAM_A SINE Alu -7 135 4 31 0 0 0 chr5 185060535 185060566 -18024966 + AT_rich Low_complexity Low_complexity 1 31 0 1130 162 20 10 chr5 185060602 185060806 -18024726 - MER2 DNA MER2_type -139 206 1 319 255 104 0 chr5 185060938 185061044 -18024488 - MER103 DNA DNA -1 165 49 239 133 22 0 chr5 185061224 185061269 -18024263 + (TTA)n Simple_repeat Simple_repeat 3 48 0 197 337 0 34 chr5 185061347 185061436 -18024096 + MER5A DNA MER1_type 81 166 -23 333 152 0 0 chr5 185064112 185064175 -18021357 - Alu SINE Alu -256 46 1 2462 154 26 2 chr5 185064535 185064951 -18020581 + MSTB LTR MaLR 1 426 0 1997 144 45 25 chr5 185065092 185065447 -18020085 - THE1B LTR MaLR -2 362 1 239 190 17 0 chr5 185065472 185065530 -18020002 + (TA)n Simple_repeat Simple_repeat 1 59 0 1582 177 29 23 chr5 185066707 185067017 -18018515 - AluJb SINE Alu 0 312 1 2167 121 3 3 chr5 185067122 185067468 -18018064 + AluSp SINE Alu 1 346 0 252 267 70 0 chr5 185067559 185067645 -18017887 + MIR SINE MIR 101 192 -70 4003 139 44 7 chr5 185067795 185068477 -18017055 - Tigger2 DNA MER2_type 0 2718 2012 1622 164 0 50 chr5 185068579 185068877 -18016655 - AluJb SINE Alu -29 283 1 6692 137 45 4 chr5 185068877 185069981 -18015551 - Tigger2 DNA MER2_type -1568 1150 1 2108 153 28 0 chr5 185069999 185070353 -18015179 - THE1B LTR MaLR 0 364 1 461 303 18 18 chr5 185070380 185070545 -18014987 - MIR SINE MIR -15 247 83 28 0 0 0 chr5 185070837 185070865 -18014667 + AT_rich Low_complexity Low_complexity 1 28 0 313 229 14 0 chr5 185070866 185070936 -18014596 - MIR SINE MIR -6 256 186 194 105 26 0 chr5 185072265 185072303 -18013229 + A-rich Low_complexity Low_complexity 4 42 0 1435 185 11 17 chr5 185072350 185072637 -18012895 + AluSx SINE Alu 1 285 -27 240 35 0 0 chr5 185072637 185072666 -18012866 + (CA)n Simple_repeat Simple_repeat 2 30 0 269 392 39 0 chr5 185073139 185073220 -18012312 + MER5A DNA MER1_type 55 144 -45 194 81 27 0 chr5 185073220 185073257 -18012275 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 269 392 39 0 chr5 185073257 185073305 -18012227 + MER5A DNA MER1_type 144 189 0 290 269 67 10 chr5 185074238 185074342 -18011190 + MIR SINE MIR 32 141 -121 21 57 0 0 chr5 185075968 185076003 -18009529 + AT_rich Low_complexity Low_complexity 1 35 0 1672 191 34 36 chr5 185076566 185076954 -18008578 + L1MB8 LINE L1 5783 6169 -9 26 30 0 0 chr5 185077337 185077370 -18008162 + AT_rich Low_complexity Low_complexity 1 33 0 885 151 50 0 chr5 185078176 185078355 -18007177 + L1MA8 LINE L1 6096 6283 -8 2332 88 0 3 chr5 185078396 185078702 -18006830 + AluY SINE Alu 1 305 -6 2447 141 3 0 chr5 185079021 185079384 -18006148 + THE1B LTR MaLR 1 364 0 7609 125 48 48 chr5 185079384 185080703 -18004829 + THE1B-int LTR MaLR 1 1320 -260 22 0 0 0 chr5 185080705 185080727 -18004805 + AT_rich Low_complexity Low_complexity 1 22 0 2650 133 52 11 chr5 185080862 185081320 -18004212 + L1MB1 LINE L1 5690 6166 -2 2356 105 38 3 chr5 185081354 185081697 -18003835 + THE1A LTR MaLR 1 355 0 10830 112 16 2 chr5 185081697 185083255 -18002277 + THE1A-int LTR MaLR 1 1580 0 2571 80 14 6 chr5 185083255 185083607 -18001925 + THE1A LTR MaLR 1 355 0 785 171 71 18 chr5 185084030 185084200 -18001332 + MER53 DNA DNA 11 189 0 207 0 0 0 chr5 185084442 185084465 -18001067 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1808 146 0 7 chr5 185084572 185084853 -18000679 - AluSx SINE Alu -10 302 24 25 51 0 0 chr5 185084994 185085033 -18000499 + AT_rich Low_complexity Low_complexity 1 39 0 227 118 11 75 chr5 185085129 185085222 -18000310 + (TTTA)n Simple_repeat Simple_repeat 1 87 0 372 59 0 0 chr5 185086867 185086918 -17998614 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 185087074 185087096 -17998436 + AT_rich Low_complexity Low_complexity 1 22 0 850 189 5 66 chr5 185087743 185087939 -17997593 - MER20 DNA MER1_type 0 219 36 366 278 63 37 chr5 185088142 185088333 -17997199 + MLT1K LTR MaLR 391 586 -2 929 164 31 0 chr5 185090921 185091080 -17994452 + MER20 DNA MER1_type 56 219 0 335 316 178 7 chr5 185091599 185091751 -17993781 - MER5A DNA MER1_type -3 186 9 2332 90 0 10 chr5 185092676 185092976 -17992556 + AluSx SINE Alu 1 297 -15 1725 138 0 72 chr5 185094593 185094897 -17990635 - AluSx SINE Alu -30 282 1 291 54 0 0 chr5 185095087 185095124 -17990408 + (TG)n Simple_repeat Simple_repeat 2 38 0 302 212 73 58 chr5 185095127 185095264 -17990268 - L1MCa LINE L1 -4326 2100 1962 29 0 0 0 chr5 185096552 185096581 -17988951 + AT_rich Low_complexity Low_complexity 1 29 0 7413 27 1 17 chr5 185097299 185098430 -17987102 + L1PA4 LINE L1 5040 6155 0 648 285 46 49 chr5 185101763 185102068 -17983464 + L1M4b LINE L1 11 314 -6545 1758 257 85 54 chr5 185102426 185103703 -17981829 + L1M4b LINE L1 1089 2418 -4541 535 289 29 69 chr5 185103964 185104210 -17981322 + L2 LINE L2 2851 3086 -227 1407 274 65 48 chr5 185104823 185105404 -17980128 + L1PA12 LINE L1 50 640 -6941 1389 215 63 9 chr5 185105544 185105812 -17979720 + L1PA12 LINE L1 3318 3609 -3975 1933 126 0 0 chr5 185105812 185106089 -17979443 + AluSg SINE Alu 34 310 0 1389 215 63 9 chr5 185106089 185106155 -17979377 + L1PA12 LINE L1 3609 3670 -3914 265 130 0 0 chr5 185106155 185106201 -17979331 + AluSc SINE Alu 254 299 0 16041 152 11 13 chr5 185106205 185106876 -17978656 + L1P LINE L1 2163 2834 -3312 2236 97 3 0 chr5 185106876 185107174 -17978358 + AluY SINE Alu 1 299 -12 16041 152 11 13 chr5 185107174 185109427 -17976105 + L1P LINE L1 2834 5080 -1066 439 280 106 52 chr5 185109904 185110263 -17975269 - L1MC5 LINE L1 -191 7851 7371 699 255 36 5 chr5 185110268 185110460 -17975072 + L2 LINE L2 1825 2022 -1292 315 288 136 30 chr5 185111310 185111442 -17974090 - MLT1L LTR MaLR -161 454 309 1762 178 0 0 chr5 185113346 185113633 -17971899 - AluSx SINE Alu -18 294 8 182 310 155 0 chr5 185114030 185114088 -17971444 + L2 LINE L2 3168 3234 -38 1488 67 22 202 chr5 185114470 185114841 -17970691 - AluYb8 SINE Alu -4 304 1 21 0 0 0 chr5 185115013 185115034 -17970498 + AT_rich Low_complexity Low_complexity 1 21 0 525 258 37 74 chr5 185115870 185116114 -17969418 + L2 LINE L2 3079 3313 0 253 258 0 15 chr5 185116736 185116802 -17968730 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 2284 85 0 19 chr5 185117223 185117540 -17967992 + AluY SINE Alu 1 311 0 189 0 0 0 chr5 185117733 185117754 -17967778 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 558 324 195 29 chr5 185117821 185118333 -17967199 + L2 LINE L2 2286 2882 -432 757 169 0 34 chr5 185118779 185118927 -17966605 - FLAM_C SINE Alu 0 143 1 488 116 0 0 chr5 185119016 185119085 -17966447 + MSTC LTR MaLR 5 73 -355 198 0 0 0 chr5 185119098 185119120 -17966412 + (T)n Simple_repeat Simple_repeat 1 22 0 1986 266 66 20 chr5 185119530 185120714 -17964818 + L1MDb LINE L1 771 2031 -4375 1272 261 74 44 chr5 185120775 185121659 -17963873 + L1MDb LINE L1 2147 3069 -3337 314 349 63 60 chr5 185121707 185121790 -17963742 + L2 LINE L2 2981 3062 -251 2519 48 3 16 chr5 185121790 185122105 -17963427 - AluY SINE Alu 0 311 1 314 349 63 60 chr5 185122105 185122166 -17963366 + L2 LINE L2 3062 3121 -192 1855 174 54 23 chr5 185122166 185122557 -17962975 + MER57A LTR ERV1 1 403 0 314 349 63 60 chr5 185122557 185122743 -17962789 + L2 LINE L2 3121 3313 0 2045 173 61 27 chr5 185122866 185123310 -17962222 + LTR2B LTR ERV1 32 490 0 25 0 0 0 chr5 185124431 185124456 -17961076 + AT_rich Low_complexity Low_complexity 1 25 0 733 216 142 0 chr5 185124529 185124691 -17960841 + MER5A DNA MER1_type 1 185 -4 366 306 51 19 chr5 185125231 185125388 -17960144 + MER5B DNA MER1_type 11 172 -6 402 316 90 23 chr5 185125465 185125721 -17959811 + L1MEd LINE L1 823 1095 -5024 2046 133 0 19 chr5 185125739 185126048 -17959484 + AluSc SINE Alu 1 303 -6 203 352 0 0 chr5 185126071 185126162 -17959370 + GA-rich Low_complexity Low_complexity 2 92 0 1317 243 27 62 chr5 185126185 185126589 -17958943 + MLT1B LTR MaLR 1 390 0 227 272 146 19 chr5 185127408 185127511 -17958021 - L2 LINE L2 -1 3271 3156 725 274 30 0 chr5 185127877 185128078 -17957454 + L2 LINE L2 2348 2554 -760 1844 173 58 22 chr5 185128083 185128483 -17957049 + MLT1C LTR MaLR 1 414 -53 337 192 64 13 chr5 185128483 185128561 -17956971 + MER81 DNA DNA 33 114 0 569 340 13 61 chr5 185128561 185128937 -17956595 + L2 LINE L2 2892 3249 -64 414 304 227 5 chr5 185129690 185129884 -17955648 + MIR SINE MIR 16 252 -10 189 0 0 0 chr5 185131208 185131229 -17954303 + (A)n Simple_repeat Simple_repeat 1 21 0 223 319 52 59 chr5 185131332 185131467 -17954065 - L2 LINE L2 -1 3271 3138 2214 86 34 0 chr5 185132065 185132356 -17953176 + AluY SINE Alu 2 302 -9 372 288 101 54 chr5 185132476 185132754 -17952778 + LTR33 LTR ERVL 91 381 -140 305 326 61 33 chr5 185132824 185133005 -17952527 + L2 LINE L2 3122 3307 -6 22 0 0 0 chr5 185134077 185134099 -17951433 + AT_rich Low_complexity Low_complexity 1 22 0 378 277 10 10 chr5 185134435 185134536 -17950996 + MER5B DNA MER1_type 9 109 -69 210 222 0 0 chr5 185134544 185134598 -17950934 + (TA)n Simple_repeat Simple_repeat 1 54 0 297 0 0 0 chr5 185134658 185134691 -17950841 + (CA)n Simple_repeat Simple_repeat 2 34 0 230 245 0 0 chr5 185134691 185134740 -17950792 + MER5B DNA MER1_type 128 176 -2 324 0 0 0 chr5 185136676 185136712 -17948820 + (CA)n Simple_repeat Simple_repeat 1 36 0 262 229 42 144 chr5 185137900 185138018 -17947514 - L3 LINE CR1 -2 1575 1470 335 286 25 8 chr5 185138480 185138599 -17946933 + CT-rich Low_complexity Low_complexity 4 124 0 2110 120 0 7 chr5 185138677 185138977 -17946555 + AluSx SINE Alu 1 298 -14 429 233 148 9 chr5 185138978 185139194 -17946338 + MLT1H LTR MaLR 286 544 -5 320 288 216 0 chr5 185139668 185139779 -17945753 - MER5A DNA MER1_type 0 189 55 487 346 65 57 chr5 185140434 185140935 -17944597 + L2 LINE L2 2760 3272 0 1938 75 4 60 chr5 185142333 185142614 -17942918 - AluY SINE Alu -12 299 35 229 267 87 50 chr5 185143276 185143437 -17942095 + L1MEd LINE L1 210 376 -5829 530 316 30 51 chr5 185144325 185144660 -17940872 + L3 LINE CR1 626 953 -624 696 233 14 7 chr5 185144688 185144834 -17940698 + FRAM SINE Alu 1 146 -30 331 314 7 22 chr5 185145329 185145466 -17940066 + MLT1K LTR MaLR 447 581 -7 303 311 45 0 chr5 185146340 185146517 -17939015 - L1M4 LINE L1 -1877 4269 4085 3897 273 70 25 chr5 185146550 185148601 -17936931 + L1MEd LINE L1 2069 4173 -2042 1919 125 19 3 chr5 185148602 185148914 -17936618 - L1PA14 LINE L1 0 6161 5845 611 258 15 95 chr5 185149684 185150010 -17935522 + MER46C DNA MER2_type 1 300 -38 1623 167 13 31 chr5 185150265 185150582 -17934950 - AluSx SINE Alu -1 311 1 908 192 32 93 chr5 185150778 185150882 -17934650 - MER33 DNA MER1_type -2262 323 214 2123 122 10 0 chr5 185150882 185151186 -17934346 + AluSx SINE Alu 1 307 -5 908 192 32 93 chr5 185151186 185151425 -17934107 - MER33 DNA MER1_type -2371 214 1 734 288 55 42 chr5 185151443 185151843 -17933689 - Charlie8 DNA MER1_type -1928 489 85 292 287 128 31 chr5 185152984 185153179 -17932353 - MLT1L LTR MaLR -33 582 369 22 0 0 0 chr5 185153505 185153527 -17932005 + AT_rich Low_complexity Low_complexity 1 22 0 1085 196 188 3 chr5 185153576 185153926 -17931606 + MLT2C2 LTR ERVL 1 412 -52 293 243 0 0 chr5 185154286 185154356 -17931176 + MIR SINE MIR 183 252 -10 393 325 25 0 chr5 185155786 185155906 -17929626 + MIR SINE MIR 1 123 -139 788 126 0 22 chr5 185155907 185155923 -17929609 - L1MC1 LINE L1 -263 6070 6055 13509 144 36 15 chr5 185155923 185158290 -17927242 - Tigger1 DNA MER2_type 0 2418 1 788 126 0 22 chr5 185158290 185158408 -17927124 - L1MC1 LINE L1 -278 6055 5939 262 312 11 21 chr5 185158898 185158991 -17926541 + MIR3 SINE MIR 111 202 -6 393 333 31 16 chr5 185159203 185159395 -17926137 + MLT1K LTR MaLR 150 344 -244 660 272 31 10 chr5 185160098 185160293 -17925239 + L1MC4a LINE L1 6629 6827 -981 2313 187 42 17 chr5 185160301 185163719 -17921813 + L1PA5 LINE L1 6 3336 -3534 2210 136 0 0 chr5 185163719 185164029 -17921503 + AluSx SINE Alu 1 310 -2 2313 187 42 17 chr5 185164029 185164049 -17921483 + L1PA5 LINE L1 3336 3354 -3516 2313 64 13 3 chr5 185164049 185164360 -17921172 + L1PA5 LINE L1 6557 6870 0 2313 187 42 17 chr5 185164360 185167100 -17918432 + L1PA5 LINE L1 3354 6870 0 291 157 0 0 chr5 185167114 185167165 -17918367 + (TA)n Simple_repeat Simple_repeat 1 51 0 333 253 11 11 chr5 185167165 185167252 -17918280 - L1MC4 LINE L1 -1341 6701 6615 2138 141 6 3 chr5 185167252 185167613 -17917919 + L1PB1 LINE L1 5782 6143 -8 414 228 20 0 chr5 185167793 185167894 -17917638 + L1MC5 LINE L1 6982 7084 -877 226 71 0 0 chr5 185167926 185167968 -17917564 - LTR66 LTR ERVL -171 439 398 242 167 0 37 chr5 185167976 185168030 -17917502 - L1MC4 LINE L1 -1339 6703 6652 284 224 26 0 chr5 185168030 185168106 -17917426 - L1MC4 LINE L1 -1339 6703 6626 204 40 0 0 chr5 185168106 185168131 -17917401 + (CA)n Simple_repeat Simple_repeat 2 26 0 593 228 50 22 chr5 185168158 185168338 -17917194 + L1MC5 LINE L1 7154 7338 -623 388 148 0 0 chr5 185168377 185168438 -17917094 + MER3 DNA MER1_type 148 208 -1 761 234 113 36 chr5 185168439 185168853 -17916679 + L1MC5 LINE L1 7333 7778 -183 1036 143 0 13 chr5 185168853 185169007 -17916525 + FRAM SINE Alu 1 150 -26 32 0 0 0 chr5 185169010 185169042 -17916490 + AT_rich Low_complexity Low_complexity 1 32 0 1723 154 0 18 chr5 185169236 185169521 -17916011 - AluJb SINE Alu -32 280 1 2158 117 0 3 chr5 185170440 185170738 -17914794 + AluSc SINE Alu 1 297 -12 243 0 0 0 chr5 185170813 185170840 -17914692 + (CA)n Simple_repeat Simple_repeat 2 28 0 1169 244 63 38 chr5 185171688 185171836 -17913696 - MSTD LTR MaLR -20 376 233 315 0 0 0 chr5 185171836 185171871 -17913661 + (TG)n Simple_repeat Simple_repeat 1 35 0 1169 244 63 38 chr5 185171871 185172087 -17913445 - MSTD LTR MaLR -163 233 3 267 364 64 40 chr5 185172181 185172508 -17913024 - L2 LINE L2 -448 2866 2532 415 174 0 0 chr5 185173438 185173507 -17912025 - MER46C DNA MER2_type -9 329 261 301 259 129 36 chr5 185173533 185173672 -17911860 - MER46C DNA MER2_type -150 188 37 386 357 43 22 chr5 185175727 185175912 -17909620 - L2 LINE L2 -9 3263 3075 270 208 52 13 chr5 185177245 185177322 -17908210 - MLT1K LTR MaLR -2 586 507 180 125 0 0 chr5 185177650 185177682 -17907850 + (TA)n Simple_repeat Simple_repeat 1 32 0 3096 55 0 0 chr5 185177690 185178075 -17907457 + L1PA5 LINE L1 5762 6146 -8 48 67 0 0 chr5 185178081 185178171 -17907361 + AT_rich Low_complexity Low_complexity 1 90 0 23 33 0 0 chr5 185179041 185179071 -17906461 + AT_rich Low_complexity Low_complexity 1 30 0 183 313 0 0 chr5 185179208 185179256 -17906276 - L2 LINE L2 -16 3297 3250 807 310 125 6 chr5 185179293 185179645 -17905887 - L2 LINE L2 0 3313 2920 606 322 49 25 chr5 185179698 185179943 -17905589 + MIR SINE MIR 12 262 0 424 233 54 23 chr5 185180918 185181047 -17904485 - MIR SINE MIR -79 183 51 703 311 46 46 chr5 185181366 185181758 -17903774 + L2 LINE L2 2922 3313 0 258 81 0 0 chr5 185181858 185181895 -17903637 + (CA)n Simple_repeat Simple_repeat 2 38 0 190 306 92 81 chr5 185182698 185182959 -17902573 - L2 LINE L2 -202 3070 2807 324 155 0 0 chr5 185183053 185183124 -17902408 + (TG)n Simple_repeat Simple_repeat 2 72 0 791 253 12 6 chr5 185183570 185183740 -17901792 - MER45A DNA AcHobo -6 172 2 1083 127 0 33 chr5 185183758 185183939 -17901593 - THE1C LTR MaLR -200 175 1 414 258 26 45 chr5 185184153 185184308 -17901224 + MLT1L LTR MaLR 462 613 -2 567 200 40 0 chr5 185185686 185185811 -17899721 - L1M2 LINE L1 -520 5771 5642 25 0 0 0 chr5 185185811 185185836 -17899696 + AT_rich Low_complexity Low_complexity 1 25 0 554 195 113 67 chr5 185185955 185186150 -17899382 - LTR16A1 LTR ERVL 0 457 254 249 326 83 15 chr5 185186827 185186959 -17898573 + L2 LINE L2 2914 3054 -218 779 305 133 44 chr5 185187004 185187537 -17897995 - L2 LINE L2 0 3313 2724 283 316 86 17 chr5 185187801 185187975 -17897557 + LTR16A1 LTR ERVL 81 266 -191 388 284 161 50 chr5 185189605 185189768 -17895764 - L1ME4a LINE L1 -11 6110 5966 2022 133 26 0 chr5 185189768 185190070 -17895462 + AluSx SINE Alu 1 310 -2 388 284 161 50 chr5 185190070 185190242 -17895290 - L1ME4a LINE L1 -155 5966 5814 2159 90 20 3 chr5 185190242 185190541 -17894991 - AluY SINE Alu -7 304 1 388 284 161 50 chr5 185190541 185190701 -17894831 - L1ME4a LINE L1 -307 5814 5559 1775 246 109 47 chr5 185190892 185191825 -17893707 - L1ME4a LINE L1 -1117 5029 4039 674 223 117 46 chr5 185191841 185192191 -17893341 - L1ME4a LINE L1 -2251 3895 3521 2286 97 0 3 chr5 185192472 185192772 -17892760 - AluSq SINE Alu -10 303 5 24 0 0 0 chr5 185193181 185193205 -17892327 + AT_rich Low_complexity Low_complexity 1 24 0 1834 254 26 46 chr5 185197047 185197634 -17887898 - MLT1E2 LTR MaLR 0 626 52 1709 118 265 21 chr5 185197660 185198000 -17887532 - MSTA LTR MaLR 0 428 6 2098 125 10 0 chr5 185198563 185198839 -17886693 + AluSp SINE Alu 4 285 -28 234 0 0 0 chr5 185198839 185198865 -17886667 + (CA)n Simple_repeat Simple_repeat 1 26 0 2098 125 10 0 chr5 185198865 185198883 -17886649 + AluSp SINE Alu 285 301 -12 263 237 34 0 chr5 185199577 185199636 -17885896 + MER81 DNA DNA 50 110 -4 2242 121 48 22 chr5 185199636 185199991 -17885541 + THE1B LTR MaLR 1 364 0 1259 147 43 5 chr5 185201440 185201651 -17883881 - MER20 DNA MER1_type 0 219 1 921 228 5 16 chr5 185202279 185202463 -17883069 + MER5A DNA MER1_type 1 182 -7 230 309 151 0 chr5 185203233 185203359 -17882173 - L2 LINE L2 -1 3312 3168 496 356 171 3 chr5 185204242 185204593 -17880939 + L2 LINE L2 2393 2802 -512 227 327 82 27 chr5 185204577 185204687 -17880845 - MIR SINE MIR -84 178 63 * 293 231 77 33 chr5 185205022 185205113 -17880419 + MIR SINE MIR 67 161 -101 2121 117 0 10 chr5 185205115 185205422 -17880110 + AluSc SINE Alu 1 304 -5 2139 240 105 31 chr5 185205763 185206380 -17879152 - MLT2F LTR ERVL 0 663 1 5432 254 63 17 chr5 185206381 185207941 -17877591 - ERVL-F LTR ERVL -9 5755 4124 1588 272 114 13 chr5 185207941 185208390 -17877142 - MLT2F LTR ERVL -165 498 5 328 351 12 41 chr5 185208467 185208638 -17876894 + MIR3 SINE MIR 11 176 -32 536 336 58 0 chr5 185208662 185208870 -17876662 + MIR SINE MIR 38 257 -5 380 215 50 58 chr5 185209571 185209692 -17875840 - MLT1K LTR MaLR -57 531 412 939 207 0 0 chr5 185209938 185210107 -17875425 - MLT1B LTR MaLR 0 390 222 301 346 59 52 chr5 185210456 185210843 -17874689 - L2 LINE L2 -709 2605 2216 301 285 70 104 chr5 185211331 185211629 -17873903 + L2 LINE L2 2985 3272 0 189 291 282 0 chr5 185212232 185212335 -17873197 - MIR SINE MIR -89 173 42 206 146 0 36 chr5 185212466 185212521 -17873011 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr5 185214093 185214113 -17871419 + (TA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 185214413 185214434 -17871098 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 185214826 185214850 -17870682 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 185215661 185215682 -17869850 + AT_rich Low_complexity Low_complexity 1 21 0 302 342 136 55 chr5 185216472 185216729 -17868803 - L2 LINE L2 0 3272 2995 252 314 97 32 chr5 185216817 185216941 -17868591 - L2 LINE L2 -5 3267 3136 536 313 170 5 chr5 185216958 185217182 -17868350 - MIR SINE MIR 0 262 2 789 301 52 42 chr5 185217296 185217778 -17867754 + LTR16C LTR ERVL 4 490 -1 433 263 11 0 chr5 185218041 185218136 -17867396 - MIR3 SINE MIR -27 181 86 180 0 0 0 chr5 185219418 185219438 -17866094 + (A)n Simple_repeat Simple_repeat 1 20 0 224 213 16 0 chr5 185220029 185220090 -17865442 + CT-rich Low_complexity Low_complexity 3 64 0 983 136 0 6 chr5 185220090 185220266 -17865266 + (TTCC)n Simple_repeat Simple_repeat 3 177 0 815 283 18 9 chr5 185220315 185220534 -17864998 - MER58A DNA MER1_type -2 222 2 34 42 0 0 chr5 185220641 185220689 -17864843 + AT_rich Low_complexity Low_complexity 1 48 0 220 264 55 27 chr5 185220722 185220832 -17864700 - MIR SINE MIR -27 235 123 1132 45 0 0 chr5 185220983 185221115 -17864417 + AluY SINE Alu 1 132 -179 225 0 0 0 chr5 185221115 185221140 -17864392 + (A)n Simple_repeat Simple_repeat 1 25 0 508 207 0 85 chr5 185221338 185221502 -17864030 - L1MA7 LINE L1 -1 6290 6141 233 314 40 51 chr5 185221507 185221682 -17863850 + MER20B DNA MER1_type 7 179 -604 789 278 45 74 chr5 185221762 185222183 -17863349 + MLT1L LTR MaLR 1 409 -206 248 0 31 0 chr5 185222988 185223020 -17862512 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2106 101 29 0 chr5 185223029 185223307 -17862225 - AluSq SINE Alu -27 286 1 213 39 0 0 chr5 185224507 185224533 -17860999 + (TTG)n Simple_repeat Simple_repeat 2 27 0 253 342 10 67 chr5 185224597 185224790 -17860742 + MER5A DNA MER1_type 8 189 0 28 0 0 0 chr5 185225230 185225258 -17860274 + AT_rich Low_complexity Low_complexity 1 28 0 318 354 105 5 chr5 185227063 185227272 -17858260 - MIR SINE MIR -8 254 25 24 32 0 0 chr5 185227752 185227783 -17857749 + AT_rich Low_complexity Low_complexity 1 31 0 21 89 0 0 chr5 185228016 185228072 -17857460 + AT_rich Low_complexity Low_complexity 1 56 0 207 0 0 0 chr5 185228645 185228668 -17856864 + (A)n Simple_repeat Simple_repeat 1 23 0 328 310 15 26 chr5 185228682 185228846 -17856686 + MIR3 SINE MIR 39 201 -7 381 351 118 31 chr5 185230165 185230589 -17854943 - L2 LINE L2 -47 3266 2806 231 386 9 35 chr5 185230651 185230765 -17854767 + L2 LINE L2 3143 3253 -19 1830 157 40 0 chr5 185230795 185230914 -17854618 + AluJb SINE Alu 1 114 -198 198 0 0 0 chr5 185230914 185230936 -17854596 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1830 157 40 0 chr5 185230936 185231116 -17854416 + AluJb SINE Alu 114 312 0 248 217 142 50 chr5 185231400 185231520 -17854012 + MLT1L LTR MaLR 306 436 -179 2286 111 0 9 chr5 185232108 185232423 -17853109 - AluSx SINE Alu 0 312 1 367 255 47 67 chr5 185232920 185233069 -17852463 + L2 LINE L2 3168 3313 0 325 307 33 13 chr5 185234436 185234586 -17850946 + L1 LINE L1 2442 2594 -3552 26 30 0 0 chr5 185234596 185234629 -17850903 + AT_rich Low_complexity Low_complexity 1 33 0 240 221 47 23 chr5 185234699 185234785 -17850747 + L1 LINE L1 2656 2743 -3403 21 36 0 0 chr5 185235420 185235448 -17850084 + AT_rich Low_complexity Low_complexity 1 28 0 690 256 102 30 chr5 185236605 185236967 -17848565 - L1ME3A LINE L1 -57 6105 5707 493 271 133 95 chr5 185237074 185237397 -17848135 - MLT1H1 LTR MaLR -2 553 201 2070 99 0 43 chr5 185237397 185237701 -17847831 + AluSc SINE Alu 1 291 -18 493 271 133 95 chr5 185237701 185237829 -17847703 - MLT1H1 LTR MaLR -354 201 79 443 233 68 37 chr5 185239197 185239360 -17846172 - MLT1H1 LTR MaLR -17 538 371 343 272 195 31 chr5 185239424 185239619 -17845913 - MLT1H LTR MaLR -297 258 32 279 0 0 0 chr5 185239775 185239806 -17845726 + (T)n Simple_repeat Simple_repeat 1 31 0 202 337 143 0 chr5 185240003 185240101 -17845431 + L2 LINE L2 3155 3266 -6 186 280 205 60 chr5 185240173 185240373 -17845159 - MIR SINE MIR 0 262 34 181 244 0 24 chr5 185240702 185240743 -17844789 + L2 LINE L2 2714 2753 -561 530 366 89 25 chr5 185240808 185241201 -17844331 + L2 LINE L2 2896 3313 0 241 409 84 0 chr5 185241324 185241478 -17844054 + L2 LINE L2 3101 3267 -5 1737 116 4 12 chr5 185241796 185242073 -17843459 - AluSp SINE Alu 0 313 49 21 0 0 0 chr5 185244626 185244647 -17840885 + AT_rich Low_complexity Low_complexity 1 21 0 249 319 97 32 chr5 185245008 185245193 -17840339 + MIR SINE MIR 39 235 -27 216 97 0 0 chr5 185246490 185246521 -17839011 + (TAA)n Simple_repeat Simple_repeat 3 33 0 200 114 29 0 chr5 185246813 185246848 -17838684 + CT-rich Low_complexity Low_complexity 1 36 0 744 193 148 12 chr5 185247712 185247956 -17837576 - MER58 DNA MER1_type 0 2420 2144 368 330 77 32 chr5 185248124 185248345 -17837187 + MIR SINE MIR 32 262 0 256 159 68 0 chr5 185248358 185248402 -17837130 - MER58 DNA MER1_type -133 82 36 741 278 87 29 chr5 185248428 185248774 -17836758 + LTR16A LTR ERVL 7 372 -78 738 261 13 0 chr5 185250034 185250191 -17835341 + MER5A DNA MER1_type 30 188 -1 2003 93 43 27 chr5 185250208 185250509 -17835023 + AluSg SINE Alu 1 306 -4 28 29 0 0 chr5 185250990 185251025 -17834507 + AT_rich Low_complexity Low_complexity 1 35 0 2689 237 101 62 chr5 185251524 185253293 -17832239 + L1M2b LINE L1 1 2451 -4758 * 4838 170 62 6 chr5 185253290 185254419 -17831113 + L1MA4 LINE L1 5112 6296 -4 237 113 472 0 chr5 185254595 185254648 -17830884 + MADE1 DNA Mariner 1 78 -2 384 286 80 9 chr5 185254982 185255094 -17830438 - L2 LINE L2 0 3313 3194 833 307 103 57 chr5 185256726 185257567 -17827965 + L1ME2 LINE L1 111 990 -5406 314 279 80 20 chr5 185257618 185257819 -17827713 + L1ME2 LINE L1 3535 3747 -2468 2949 261 47 60 chr5 185257820 185259051 -17826481 + L1ME2 LINE L1 3851 5096 -1137 2123 131 0 3 chr5 185259051 185259363 -17826169 - AluSq SINE Alu 0 313 3 2949 261 47 60 chr5 185259363 185259565 -17825967 + L1ME2 LINE L1 5096 5299 -934 2034 128 0 7 chr5 185259565 185259869 -17825663 + AluSc SINE Alu 1 302 -7 2949 261 47 60 chr5 185259869 185260284 -17825248 + L1ME2 LINE L1 5299 5670 -563 272 237 0 0 chr5 185260285 185260344 -17825188 - MLT1D LTR MaLR 0 505 447 807 245 8 51 chr5 185260346 185260583 -17824949 - MLT1D LTR MaLR -160 345 119 459 248 0 0 chr5 185260686 185260787 -17824745 - MLT1D LTR MaLR -521 105 5 1113 215 132 44 chr5 185260803 185261213 -17824319 + L1ME2 LINE L1 5696 6141 -92 25 31 0 0 chr5 185261532 185261564 -17823968 + AT_rich Low_complexity Low_complexity 1 32 0 467 319 84 9 chr5 185261655 185261868 -17823664 - MIR SINE MIR 0 262 34 210 91 0 0 chr5 185261879 185261912 -17823620 + (CA)n Simple_repeat Simple_repeat 2 34 0 2066 212 75 6 chr5 185262351 185262832 -17822700 - MER67D LTR ERV1 0 514 1 297 0 0 0 chr5 185263280 185263313 -17822219 + (TG)n Simple_repeat Simple_repeat 1 33 0 330 380 62 0 chr5 185263454 185263583 -17821949 + L2 LINE L2 3136 3272 0 4665 136 3 7 chr5 185264547 185265261 -17820271 - MER50 LTR ERV1 -23 711 1 1979 139 0 50 chr5 185265276 185265599 -17819933 + AluSx SINE Alu 1 307 -5 611 309 63 5 chr5 185265933 185266156 -17819376 - MIR SINE MIR -8 254 19 2413 128 17 3 chr5 185266934 185267293 -17818239 + THE1B LTR MaLR 1 364 0 2115 96 14 3 chr5 185268615 185268908 -17816624 + AluSq SINE Alu 1 296 -17 474 270 181 0 chr5 185270255 185270459 -17815073 - MIR SINE MIR -4 258 18 225 65 0 0 chr5 185270557 185270588 -17814944 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 74 0 0 chr5 185271785 185271812 -17813720 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr5 185272291 185272312 -17813220 + AT_rich Low_complexity Low_complexity 1 21 0 306 347 27 27 chr5 185272558 185272705 -17812827 + MIR SINE MIR 60 206 -56 437 277 34 20 chr5 185272935 185273083 -17812449 - MIR SINE MIR -12 250 101 2081 141 21 26 chr5 185273168 185273545 -17811987 - THE1C LTR MaLR 0 375 1 367 300 0 0 chr5 185273568 185273658 -17811874 - MER5A DNA MER1_type -87 102 13 207 309 25 0 chr5 185274141 185274222 -17811310 + A-rich Low_complexity Low_complexity 2 84 0 252 86 0 0 chr5 185274915 185274950 -17810582 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 190 254 55 18 chr5 185275312 185275367 -17810165 - L2 LINE L2 -221 3051 2995 2136 137 96 10 chr5 185275607 185276001 -17809531 + MSTA LTR MaLR 1 428 0 215 396 19 19 chr5 185276745 185276851 -17808681 + MIR SINE MIR 32 137 -71 198 0 0 0 chr5 185276878 185276900 -17808632 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 270 284 11 34 chr5 185277236 185277324 -17808208 - L2 LINE L2 -188 3084 2999 25 51 0 0 chr5 185277811 185277850 -17807682 + AT_rich Low_complexity Low_complexity 1 39 0 26 64 0 0 chr5 185279397 185279444 -17806088 + AT_rich Low_complexity Low_complexity 1 47 0 1697 113 135 0 chr5 185279966 185280232 -17805300 - AluSx SINE Alu 0 302 1 25 0 0 0 chr5 185280241 185280266 -17805266 + AT_rich Low_complexity Low_complexity 1 25 0 1942 148 25 72 chr5 185280474 185280906 -17804626 - MSTB1 LTR MaLR -20 412 1 34 0 0 0 chr5 185281049 185281083 -17804449 + AT_rich Low_complexity Low_complexity 1 34 0 243 234 21 53 chr5 185281512 185281606 -17803926 - L1MC4 LINE L1 -1338 6704 6614 1994 112 28 3 chr5 185281616 185281901 -17803631 - AluSq SINE Alu -21 292 1 2004 142 0 7 chr5 185281987 185282289 -17803243 - AluSg SINE Alu -1 309 10 342 186 43 0 chr5 185282300 185282370 -17803162 + Charlie8 DNA MER1_type 108 180 -2237 967 208 17 38 chr5 185282410 185282650 -17802882 - Tigger7 DNA MER2_type -244 306 72 * 1919 154 20 20 chr5 185282645 185282990 -17802542 + Tigger7 DNA MER2_type 2243 2587 0 2029 133 82 17 chr5 185283568 185283920 -17801612 - THE1C LTR MaLR 0 375 1 10215 113 44 1 chr5 185283920 185285435 -17800097 - THE1B-int LTR MaLR 0 1580 1 2304 146 8 8 chr5 185285435 185285799 -17799733 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr5 185286000 185286020 -17799512 + (TTG)n Simple_repeat Simple_repeat 2 21 0 521 339 143 21 chr5 185287593 185288081 -17797451 - L2 LINE L2 -1 3312 2762 1765 151 33 7 chr5 185288248 185288552 -17796980 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 185289196 185289218 -17796314 + AT_rich Low_complexity Low_complexity 1 22 0 2265 64 10 10 chr5 185289220 185289515 -17796017 + AluY SINE Alu 1 295 -16 232 261 0 0 chr5 185290630 185290695 -17794837 - MLT1F LTR MaLR 0 567 503 4140 179 31 30 chr5 185290695 185291576 -17793956 + L1MB8 LINE L1 5286 6167 -11 1813 238 47 42 chr5 185291587 185292058 -17793474 - MLT1F LTR MaLR -52 490 18 1466 176 20 44 chr5 185292077 185292372 -17793160 - AluJo SINE Alu -16 296 9 232 305 162 42 chr5 185292978 185293237 -17792295 + L2 LINE L2 2972 3261 -11 630 331 72 34 chr5 185293241 185293658 -17791874 - L3 LINE CR1 -16 1561 1129 26 30 0 0 chr5 185294661 185294694 -17790838 + AT_rich Low_complexity Low_complexity 1 33 0 375 235 265 54 chr5 185294712 185294916 -17790616 - MIR SINE MIR 0 262 16 185 264 93 97 chr5 185294911 185295127 -17790405 - L3 LINE CR1 -804 773 559 * 640 220 29 0 chr5 185295522 185295695 -17789837 - MER104 DNA MER2_type -2 178 1 449 307 61 39 chr5 185296233 185296464 -17789068 + MIR SINE MIR 11 246 -16 568 307 45 10 chr5 185296638 185296840 -17788692 + MIR SINE MIR 40 248 -14 520 306 69 9 chr5 185299648 185299880 -17785652 - MIR SINE MIR -6 256 11 237 224 0 20 chr5 185300769 185300818 -17784714 - MER5B DNA MER1_type -125 53 6 2791 3 0 3 chr5 185301978 185302283 -17783249 + AluYa5 SINE Alu 1 304 -7 6118 133 67 35 chr5 185303260 185304158 -17781374 + Tigger3b DNA MER2_type 38 982 -2046 2264 108 0 9 chr5 185304158 185304473 -17781059 - AluSx SINE Alu 0 312 1 6118 133 67 35 chr5 185304473 185304732 -17780800 + Tigger3b DNA MER2_type 982 1231 0 330 305 212 23 chr5 185305357 185305859 -17779673 + L2 LINE L2 2708 3309 -4 518 284 111 0 chr5 185305890 185306080 -17779452 - MIR SINE MIR -10 252 42 200 178 0 44 chr5 185307332 185307377 -17778155 + CT-rich Low_complexity Low_complexity 3 45 0 2049 169 19 5 chr5 185307505 185307872 -17777660 + MER83C LTR ERV1 2 373 0 416 298 68 6 chr5 185308747 185308908 -17776624 + MIR SINE MIR 92 262 0 391 333 108 61 chr5 185309460 185309884 -17775648 + L2 LINE L2 2804 3247 -66 21 0 0 0 chr5 185309894 185309915 -17775617 + AT_rich Low_complexity Low_complexity 1 21 0 249 277 0 15 chr5 185310262 185310327 -17775205 - LTR67 LTR ERVL -1 556 493 244 140 18 18 chr5 185310327 185310384 -17775148 + GA-rich Low_complexity Low_complexity 4 60 0 1193 132 81 17 chr5 185310397 185310632 -17774900 + L1PB3 LINE L1 5556 5805 -349 393 58 93 14 chr5 185310632 185310771 -17774761 + (TA)n Simple_repeat Simple_repeat 2 151 0 31 57 0 0 chr5 185310972 185311007 -17774525 + AT_rich Low_complexity Low_complexity 1 35 0 313 207 58 23 chr5 185311007 185311094 -17774438 + L1MC4 LINE L1 6612 6701 -1341 200 143 24 0 chr5 185311096 185311138 -17774394 + (TA)n Simple_repeat Simple_repeat 1 43 0 245 239 22 43 chr5 185311142 185311234 -17774298 - L1MC4 LINE L1 -1339 6703 6614 255 151 27 27 chr5 185311151 185311224 -17774308 + L1MC3 LINE L1 6572 6644 -1141 373 168 47 0 chr5 185311236 185311343 -17774189 + (TA)n Simple_repeat Simple_repeat 2 113 0 252 0 0 0 chr5 185311352 185311380 -17774152 + (CA)n Simple_repeat Simple_repeat 2 29 0 2220 143 0 24 chr5 185311380 185311749 -17773783 + L1PB3 LINE L1 5792 6153 -1 1615 176 25 0 chr5 185312554 185312838 -17772694 + AluJo SINE Alu 1 291 -21 248 240 0 0 chr5 185313471 185313521 -17772011 + GA-rich Low_complexity Low_complexity 2 51 0 205 194 0 0 chr5 185313524 185313560 -17771972 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 2141 125 3 0 chr5 185316604 185316915 -17768617 - AluSx SINE Alu 0 312 1 2275 137 174 2 chr5 185317683 185318115 -17767417 + LTR54 LTR ERV1 5 510 0 22 70 0 0 chr5 185318568 185318611 -17766921 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 185319754 185319776 -17765756 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 185320029 185320050 -17765482 + AT_rich Low_complexity Low_complexity 1 21 0 1833 128 17 73 chr5 185320174 185320479 -17765053 + MER44D DNA MER2_type 2 556 -1935 2207 86 3 52 chr5 185320479 185320804 -17764728 - AluY SINE Alu -2 309 1 1833 128 17 73 chr5 185320804 185320856 -17764676 + MER44D DNA MER2_type 556 609 0 24 53 0 0 chr5 185322116 185322154 -17763378 + AT_rich Low_complexity Low_complexity 1 38 0 1162 204 60 45 chr5 185322867 185323220 -17762312 - MER31A LTR ERV1 -55 430 73 452 312 59 41 chr5 185323212 185323433 -17762099 - MER102b DNA MER1_type -22 319 95 * 330 26 0 0 chr5 185323454 185323493 -17762039 + (TG)n Simple_repeat Simple_repeat 2 40 0 1737 131 34 21 chr5 185323493 185323775 -17761757 - AluSq SINE Alu -24 289 1 3126 125 26 2 chr5 185323799 185324263 -17761269 - MER1A DNA MER1_type 0 529 55 299 272 217 22 chr5 185325594 185325778 -17759754 - MIR SINE MIR -25 237 18 688 193 29 35 chr5 185325797 185325968 -17759564 - MIR SINE MIR 0 262 93 1377 216 52 0 chr5 185328512 185328799 -17756733 - AluJb SINE Alu 0 302 1 1443 260 54 37 chr5 185329760 185330417 -17755115 - MER21B LTR ERV1 -48 815 98 425 206 76 11 chr5 185330456 185330548 -17754984 - MER21B LTR ERV1 -765 98 1 294 359 99 14 chr5 185331755 185331897 -17753635 + MER91A DNA MER1_type 43 196 0 312 206 19 9 chr5 185331949 185332056 -17753476 + GA-rich Low_complexity Low_complexity 3 110 0 208 27 54 27 chr5 185332072 185332109 -17753423 + (CAGGG)n Simple_repeat Simple_repeat 1 38 0 282 29 0 0 chr5 185332218 185332253 -17753279 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr5 185332721 185332743 -17752789 + AT_rich Low_complexity Low_complexity 1 22 0 280 0 0 0 chr5 185332791 185332822 -17752710 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 1921 135 0 7 chr5 185332822 185333104 -17752428 - AluSg SINE Alu -30 280 1 1109 286 115 25 chr5 185333129 185333649 -17751883 - L1ME3A LINE L1 -9 6161 5595 1781 180 40 9 chr5 185333668 185333990 -17751542 - MER21A LTR ERV1 0 931 600 435 243 32 22 chr5 185333994 185334179 -17751353 - L1MEc LINE L1 -4015 3123 2937 1646 275 10 45 chr5 185334197 185334691 -17750841 - L1MEc LINE L1 -6382 477 1 449 359 63 22 chr5 185336142 185336365 -17749167 - MIR SINE MIR 0 262 31 2060 106 3 20 chr5 185337308 185337610 -17747922 + AluSx SINE Alu 1 297 -15 438 323 72 0 chr5 185337669 185337836 -17747696 - MIR SINE MIR -6 256 78 365 314 77 100 chr5 185338313 185338560 -17746972 + HAL1 LINE L1 827 1078 -1429 797 154 0 0 chr5 185338560 185338683 -17746849 - FLAM_C SINE Alu -10 123 1 365 314 77 100 chr5 185338683 185339167 -17746365 + HAL1 LINE L1 1078 1541 -966 337 321 93 45 chr5 185339799 185340248 -17745284 + L1M4 LINE L1 4919 5389 -757 307 272 102 39 chr5 185340379 185340644 -17744888 + L1P4 LINE L1 5584 5861 -305 316 241 71 21 chr5 185341956 185342097 -17743435 - L1ME LINE L1 -297 5824 5677 2169 149 0 20 chr5 185342812 185343167 -17742365 - MER7A DNA MER2_type 0 346 1 334 340 77 13 chr5 185343262 185343497 -17742035 - L1ME LINE L1 -806 5553 5304 21 36 0 0 chr5 185343745 185343773 -17741759 + AT_rich Low_complexity Low_complexity 1 28 0 410 337 10 48 chr5 185343921 185344162 -17741370 - L1ME LINE L1 -1302 4844 4616 1785 157 20 13 chr5 185344162 185344462 -17741070 - AluSx SINE Alu -10 302 1 410 337 10 48 chr5 185344462 185344529 -17741003 - L1ME LINE L1 -1530 4616 4548 522 319 116 39 chr5 185344558 185344679 -17740853 - L1ME LINE L1 -1709 4437 4327 2163 126 0 0 chr5 185344679 185344988 -17740544 - AluSx SINE Alu -3 309 1 522 319 116 39 chr5 185344988 185345384 -17740148 - L1ME LINE L1 -1819 4327 3880 1649 193 3 10 chr5 185345409 185345709 -17739823 + AluJo SINE Alu 1 298 -14 2108 124 0 13 chr5 185345711 185346017 -17739515 + AluSg SINE Alu 1 302 -8 978 282 23 17 chr5 185346247 185346598 -17738934 - L1MB8 LINE L1 -1 6177 5825 808 272 119 9 chr5 185346611 185346951 -17738581 - MSTD LTR MaLR -4 453 1 1904 205 72 48 chr5 185346958 185347665 -17737867 - L1MB8 LINE L1 -363 5803 5086 2545 284 38 43 chr5 185347665 185348907 -17736625 + L1ME2 LINE L1 2571 3808 -2338 8937 30 0 0 chr5 185348907 185350727 -17734805 - L1PA4 LINE L1 -8 6147 4317 2545 284 38 43 chr5 185350727 185350774 -17734758 + L1ME2 LINE L1 3808 3854 -2292 2679 192 65 5 chr5 185350785 185351389 -17734143 + L1MC3 LINE L1 7143 7782 -3 2793 264 49 39 chr5 185351390 185351942 -17733590 + L1ME2 LINE L1 3840 4385 -1761 743 168 0 0 chr5 185351942 185352067 -17733465 + FLAM_C SINE Alu 3 127 -6 2793 264 49 39 chr5 185352067 185352245 -17733287 + L1ME2 LINE L1 4385 4560 -1586 2160 125 0 0 chr5 185352245 185352548 -17732984 + AluY SINE Alu 1 303 -8 2793 264 49 39 chr5 185352548 185353076 -17732456 + L1ME2 LINE L1 4560 5112 -1034 183 42 0 0 chr5 185353209 185353233 -17732299 + (GA)n Simple_repeat Simple_repeat 1 24 0 302 127 164 0 chr5 185353537 185353592 -17731940 + L1ME2 LINE L1 5152 5215 -931 1358 289 48 25 chr5 185353596 185354154 -17731378 + L1ME2 LINE L1 5254 5824 -342 13021 214 40 28 chr5 185354173 185358783 -17726749 + L1MA5 LINE L1 4 5617 -1745 189 0 0 0 chr5 185358783 185358804 -17726728 + (CA)n Simple_repeat Simple_repeat 2 22 0 13021 214 40 28 chr5 185358804 185360571 -17724961 + L1MA5 LINE L1 5617 7360 -2 29 47 0 0 chr5 185360589 185360632 -17724900 + AT_rich Low_complexity Low_complexity 1 43 0 1272 131 15 10 chr5 185360635 185360858 -17724674 + AluJb SINE Alu 84 307 0 378 204 0 20 chr5 185360860 185360958 -17724574 + L1ME2 LINE L1 5817 5912 -252 516 216 115 7 chr5 185361030 185361178 -17724354 + L1MA10 LINE L1 6170 6333 -1 270 0 0 0 chr5 185361271 185361301 -17724231 + (TC)n Simple_repeat Simple_repeat 2 31 0 294 148 0 0 chr5 185361301 185361355 -17724177 + (TA)n Simple_repeat Simple_repeat 2 55 0 2236 95 3 0 chr5 185361507 185361812 -17723720 - AluY SINE Alu -5 306 1 370 302 9 9 chr5 185363503 185363619 -17721913 + L2 LINE L2 1087 1202 -2112 610 272 78 9 chr5 185363684 185363901 -17721631 + L2 LINE L2 1413 1644 -1670 286 330 39 0 chr5 185363910 185364013 -17721519 + LTR37B LTR ERV1 5 111 -357 591 197 143 33 chr5 185364363 185364607 -17720925 + LTR37B LTR ERV1 198 468 0 966 257 131 40 chr5 185364607 185365058 -17720474 + L2 LINE L2 1641 2132 -1182 30 59 0 0 chr5 185365446 185365497 -17720035 + AT_rich Low_complexity Low_complexity 1 51 0 271 251 117 62 chr5 185366210 185366389 -17719143 + MARNA DNA Mariner 298 486 -100 24 0 0 0 chr5 185367607 185367631 -17717901 + AT_rich Low_complexity Low_complexity 1 24 0 468 256 280 12 chr5 185368281 185368531 -17717001 + MER5C DNA MER1_type 8 324 0 30 69 0 0 chr5 185368884 185368942 -17716590 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 0 chr5 185368960 185368984 -17716548 + AT_rich Low_complexity Low_complexity 1 24 0 1802 166 3 3 chr5 185369301 185369602 -17715930 + AluJb SINE Alu 1 301 -11 234 0 0 0 chr5 185369629 185369655 -17715877 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 195 204 0 0 chr5 185370468 185370512 -17715020 + (TA)n Simple_repeat Simple_repeat 1 44 0 210 238 107 48 chr5 185370512 185370596 -17714936 - MIR SINE MIR -61 201 113 221 182 18 0 chr5 185370767 185370822 -17714710 + GA-rich Low_complexity Low_complexity 2 57 0 196 363 89 0 chr5 185370858 185370993 -17714539 - L3 LINE CR1 -463 1114 968 6431 91 20 13 chr5 185372049 185372979 -17712553 - L1PA12 LINE L1 0 6168 5230 2629 104 0 0 chr5 185372979 185373334 -17712198 + THE1A LTR MaLR 1 355 0 6431 91 20 13 chr5 185373334 185373625 -17711907 - L1PA12 LINE L1 -938 5230 4942 3537 186 22 3 chr5 185373625 185374318 -17711214 + L1PA12 LINE L1 4216 4921 -1225 201 108 0 0 chr5 185374331 185374368 -17711164 + (CA)n Simple_repeat Simple_repeat 2 38 0 763 264 32 88 chr5 185374368 185374709 -17710823 + MER102b DNA MER1_type 17 338 -3 813 167 0 40 chr5 185374968 185375118 -17710414 + AluJb SINE Alu 1 144 -168 2598 181 34 0 chr5 185376120 185376589 -17708943 - MER66B LTR ERV1 0 486 2 310 269 48 29 chr5 185377072 185377176 -17708356 + MIR SINE MIR 24 129 -133 332 303 32 7 chr5 185377357 185377512 -17708020 - L1ME LINE L1 -303 5818 5660 1486 120 5 0 chr5 185377575 185377849 -17707683 + AluSg/x SINE Alu 83 357 0 351 230 24 71 chr5 185378835 185378961 -17706571 - MIR SINE MIR 0 262 143 2377 67 7 0 chr5 185378991 185379288 -17706244 + AluY SINE Alu 4 302 -9 1656 139 8 4 chr5 185379426 185379685 -17705847 + THE1C LTR MaLR 1 260 -115 481 252 99 50 chr5 185380126 185380368 -17705164 + L2 LINE L2 3058 3311 -2 341 344 45 19 chr5 185380374 185380531 -17705001 - MIR3 SINE MIR -30 178 18 32 0 0 0 chr5 185380902 185380934 -17704598 + AT_rich Low_complexity Low_complexity 1 32 0 276 279 38 13 chr5 185380936 185381015 -17704517 - L2 LINE L2 -4 3309 3229 450 218 0 106 chr5 185381041 185381094 -17704438 - MIR SINE MIR -65 197 140 2215 116 0 0 chr5 185381094 185381396 -17704136 - AluSg SINE Alu -8 302 1 450 218 0 106 chr5 185381396 185381484 -17704048 - MIR SINE MIR -122 140 71 888 132 0 0 chr5 185381490 185381626 -17703906 + AluSg/x SINE Alu 172 307 -3 239 333 0 0 chr5 185381636 185381702 -17703830 - MIR SINE MIR -184 78 13 181 238 0 0 chr5 185381818 185381860 -17703672 - L2 LINE L2 -253 3060 3019 209 322 0 123 chr5 185383110 185383256 -17702276 + MIR SINE MIR 1 128 -134 4677 179 40 22 chr5 185383304 185384264 -17701268 + L1MA9 LINE L1 5179 6121 -191 23 0 0 0 chr5 185384265 185384288 -17701244 + AT_rich Low_complexity Low_complexity 1 23 0 1492 82 5 24 chr5 185384288 185384470 -17701062 - AluSc SINE Alu -8 300 100 4677 179 40 22 chr5 185384470 185384485 -17701047 + L1MA9 LINE L1 6121 6134 -178 303 28 0 0 chr5 185384485 185384521 -17701011 + (CA)n Simple_repeat Simple_repeat 2 37 0 4677 179 40 22 chr5 185384521 185384616 -17700916 + L1MA9 LINE L1 6134 6263 -49 287 264 14 0 chr5 185385789 185385861 -17699671 + (TG)n Simple_repeat Simple_repeat 1 73 0 311 89 18 0 chr5 185387246 185387302 -17698230 + (TC)n Simple_repeat Simple_repeat 2 58 0 597 224 36 12 chr5 185387948 185388113 -17697419 - AluSc SINE Alu -41 268 100 451 215 0 25 chr5 185388144 185388265 -17697267 + L1MA9 LINE L1 6149 6266 -46 259 343 0 0 chr5 185388265 185388335 -17697197 + Tigger3(Golem) DNA MER2_type 1 70 -2959 251 228 0 0 chr5 185388532 185388589 -17696943 + (TA)n Simple_repeat Simple_repeat 1 57 0 325 250 0 52 chr5 185388593 185388689 -17696843 - L1MC4 LINE L1 -1340 6702 6612 180 158 0 0 chr5 185390411 185390449 -17695083 + CT-rich Low_complexity Low_complexity 1 38 0 251 318 32 48 chr5 185391114 185391240 -17694292 + L2 LINE L2 3155 3278 -35 195 340 124 31 chr5 185391261 185391455 -17694077 - MIR SINE MIR -49 213 2 23 33 0 0 chr5 185391953 185391983 -17693549 + AT_rich Low_complexity Low_complexity 1 30 0 1455 185 0 58 chr5 185392130 185392438 -17693094 + AluJo SINE Alu 1 290 -22 24 34 5 0 chr5 185392893 185392963 -17692569 + AT_rich Low_complexity Low_complexity 1 38 0 2135 113 7 0 chr5 185394339 185394641 -17690891 + AluSq SINE Alu 1 304 -9 252 0 0 0 chr5 185394939 185394967 -17690565 + (A)n Simple_repeat Simple_repeat 1 28 0 419 264 98 23 chr5 185395577 185395776 -17689756 - MIR SINE MIR 0 262 54 2100 105 7 14 chr5 185395908 185396236 -17689296 + AluSc SINE Alu 1 309 0 2116 145 0 0 chr5 185397019 185397329 -17688203 - AluSx SINE Alu -2 310 1 2213 156 10 41 chr5 185397551 185397967 -17687565 + MER57A LTR ERV1 1 403 0 1392 138 102 35 chr5 185398448 185398702 -17686830 + Tigger2a DNA MER2_type 2 272 -162 234 62 0 0 chr5 185398709 185398741 -17686791 + (TA)n Simple_repeat Simple_repeat 1 32 0 1804 121 29 4 chr5 185398785 185399058 -17686474 - MER1A DNA MER1_type 0 529 250 3166 156 29 0 chr5 185399386 185399898 -17685634 - MER1A DNA MER1_type 0 527 1 545 222 87 8 chr5 185399901 185400027 -17685505 + Tigger2a DNA MER2_type 309 444 0 261 246 157 30 chr5 185400304 185400438 -17685094 + MIR3 SINE MIR 48 198 -10 182 228 11 163 chr5 185401385 185401477 -17684055 - L2 LINE L2 -7 3306 3229 204 209 0 0 chr5 185401724 185401767 -17683765 + GA-rich Low_complexity Low_complexity 3 45 0 22 0 0 0 chr5 185401770 185401792 -17683740 + AT_rich Low_complexity Low_complexity 1 22 0 410 374 7 0 chr5 185402034 185402181 -17683351 - MIR SINE MIR -71 191 44 298 329 42 14 chr5 185402181 185402324 -17683208 + MER69A DNA AcHobo 2 148 -29 2150 87 3 18 chr5 185402325 185402635 -17682897 + AluSx SINE Alu 2 307 0 306 269 40 86 chr5 185402767 185402942 -17682590 + L2 LINE L2 1536 1702 -1612 273 276 23 11 chr5 185403072 185403159 -17682373 - L2 LINE L2 -2 3311 3224 191 342 45 18 chr5 185403570 185403681 -17681851 - MIR SINE MIR -101 161 48 271 390 27 59 chr5 185405031 185405218 -17680314 - L2 LINE L2 -54 3218 3038 962 252 143 60 chr5 185405413 185405543 -17679989 - HAL1 LINE L1 -687 1820 1702 2029 147 0 10 chr5 185405543 185405843 -17679689 - AluSx SINE Alu -15 297 1 962 252 143 60 chr5 185405843 185405951 -17679581 - HAL1 LINE L1 -805 1702 1604 1917 28 0 0 chr5 185405951 185406164 -17679368 - AluY SINE Alu -1 310 98 962 252 143 60 chr5 185406164 185406638 -17678894 - HAL1 LINE L1 -903 1604 1048 4534 181 30 49 chr5 185406670 185407986 -17677546 - L1MA9 LINE L1 -3 6309 5009 4246 218 44 41 chr5 185407989 185408244 -17677288 - L1MA9 LINE L1 -2530 3616 3363 2181 124 3 0 chr5 185408244 185408542 -17676990 - AluSg SINE Alu -11 299 1 4246 218 44 41 chr5 185408542 185409632 -17675900 - L1MA9 LINE L1 -2783 3363 2267 1518 258 87 49 chr5 185409653 185410277 -17675255 - L1M4c LINE L1 -3921 2463 1722 2279 99 3 6 chr5 185410277 185410589 -17674943 + AluY SINE Alu 1 311 0 1518 258 87 49 chr5 185410589 185411014 -17674518 - L1M4c LINE L1 -4662 1722 1315 1094 179 0 0 chr5 185411014 185411216 -17674316 + AluSg/x SINE Alu 115 316 0 1190 266 6 85 chr5 185411229 185411432 -17674100 - L1M4c LINE L1 -4875 1438 1221 252 59 0 0 chr5 185411432 185411466 -17674066 + (TG)n Simple_repeat Simple_repeat 1 34 0 1190 266 6 85 chr5 185411466 185411494 -17674038 - L1M4c LINE L1 -5092 1221 1192 1710 152 19 57 chr5 185411494 185411810 -17673722 - AluSx SINE Alu -8 304 1 1190 266 6 85 chr5 185411810 185412084 -17673448 - L1M4c LINE L1 -5121 1192 972 264 419 35 6 chr5 185412125 185412297 -17673235 - L1M4c LINE L1 -5254 1059 883 1410 280 92 20 chr5 185412426 185412929 -17672603 - L1M4c LINE L1 -5742 571 33 728 289 58 11 chr5 185413039 185413299 -17672233 - HAL1 LINE L1 -1606 901 630 510 278 41 60 chr5 185413390 185413656 -17671876 - HAL1 LINE L1 -2243 264 4 1672 297 52 67 chr5 185413657 185413737 -17671795 + L2 LINE L2 1823 1903 -1411 1649 168 85 21 chr5 185413737 185414077 -17671455 - THE1B LTR MaLR 0 364 3 11546 88 2 28 chr5 185414079 185415167 -17670365 - THE1B-int LTR MaLR 0 1580 466 2339 106 0 0 chr5 185415167 185415469 -17670063 + AluSc SINE Alu 6 307 -2 11546 88 2 28 chr5 185415469 185415571 -17669961 - THE1B-int LTR MaLR -1114 466 363 1951 124 48 3 chr5 185415571 185415861 -17669671 + AluSq SINE Alu 1 303 -10 11546 88 2 28 chr5 185415861 185416290 -17669242 - THE1B-int LTR MaLR -1217 363 1 2156 122 72 17 chr5 185416290 185416635 -17668897 - THE1B LTR MaLR 0 364 1 1672 297 52 67 chr5 185416635 185417354 -17668178 + L2 LINE L2 1902 2614 -700 237 260 123 53 chr5 185417370 185417491 -17668041 + L2 LINE L2 2871 3010 -262 269 363 45 19 chr5 185417738 185417895 -17667637 - MIR3 SINE MIR -30 178 18 32 0 0 0 chr5 185418266 185418298 -17667234 + AT_rich Low_complexity Low_complexity 1 32 0 268 282 39 13 chr5 185418301 185418379 -17667153 - L2 LINE L2 -5 3308 3229 444 276 63 35 chr5 185418405 185418448 -17667084 - MIR SINE MIR -65 197 157 2035 131 10 0 chr5 185418448 185418753 -17666779 - AluSg SINE Alu -2 308 1 444 276 63 35 chr5 185418753 185418883 -17666649 - MIR SINE MIR -105 157 19 2326 211 60 29 chr5 185419242 185419758 -17665774 + L1MA9 LINE L1 5616 6114 -198 1511 88 15 5 chr5 185419758 185419962 -17665570 - AluSc SINE Alu -4 305 100 2326 211 60 29 chr5 185419962 185419977 -17665555 + L1MA9 LINE L1 6114 6127 -185 300 53 0 0 chr5 185419977 185420015 -17665517 + (CA)n Simple_repeat Simple_repeat 2 39 0 2326 211 60 29 chr5 185420015 185420113 -17665419 + L1MA9 LINE L1 6127 6266 -46 259 343 0 0 chr5 185420113 185420183 -17665349 + Tigger3(Golem) DNA MER2_type 1 70 -2959 258 232 14 0 chr5 185420380 185420449 -17665083 + (TA)n Simple_repeat Simple_repeat 1 70 0 305 185 37 74 chr5 185420450 185420531 -17665001 - L1MC4 LINE L1 -1339 6703 6626 1716 166 14 3 chr5 185421262 185421558 -17663974 - AluJb SINE Alu -13 299 1 257 310 70 38 chr5 185422294 185422452 -17663080 - L2 LINE L2 0 3313 3151 21 36 0 0 chr5 185423285 185423313 -17662219 + AT_rich Low_complexity Low_complexity 1 28 0 1449 294 38 9 chr5 185426427 185426848 -17658684 - LTR16A LTR ERVL 0 450 18 335 311 42 8 chr5 185427003 185427122 -17658410 + MIR SINE MIR 28 150 -112 2179 96 3 0 chr5 185427861 185428153 -17657379 + AluY SINE Alu 1 293 -18 371 317 66 0 chr5 185428264 185428567 -17656965 - L1MC5 LINE L1 -519 7495 7261 242 231 26 13 chr5 185428591 185428669 -17656863 - L1MC5 LINE L1 -733 7228 7150 705 229 49 6 chr5 185428899 185429082 -17656450 - L1MC4 LINE L1 -1149 6893 6703 344 293 38 32 chr5 185429228 185429385 -17656147 - L1M4 LINE L1 -1034 5112 4955 25734 48 4 3 chr5 185429486 185432785 -17652747 - L1P LINE L1 -873 5273 1974 218 186 0 0 chr5 185433248 185433291 -17652241 + GA-rich Low_complexity Low_complexity 3 45 0 22 0 0 0 chr5 185433294 185433316 -17652216 + AT_rich Low_complexity Low_complexity 1 22 0 410 374 7 0 chr5 185433558 185433705 -17651827 - MIR SINE MIR -71 191 44 268 336 42 14 chr5 185433705 185433848 -17651684 + MER69A DNA AcHobo 2 148 -29 2257 94 0 23 chr5 185433849 185434157 -17651375 + AluSx SINE Alu 2 302 -10 3579 96 39 0 chr5 185434157 185434700 -17650832 + L1PBa LINE L1 1970 2533 -4330 1938 142 4 0 chr5 185434700 185434981 -17650551 + AluSg SINE Alu 1 282 -28 293 266 108 7 chr5 185435123 185435262 -17650270 - L1ME LINE L1 -403 5718 5566 281 206 213 25 chr5 185435323 185435483 -17650049 - L1M1 LINE L1 -857 5446 5257 330 356 107 5 chr5 185435645 185435861 -17649671 - MIR SINE MIR -16 246 9 1800 98 30 0 chr5 185436542 185436808 -17648724 - L1PA15 LINE L1 0 6165 5892 180 274 27 55 chr5 185436855 185436928 -17648604 + MIR SINE MIR 86 156 -106 331 198 0 49 chr5 185437220 185437301 -17648231 + L2 LINE L2 3168 3244 -69 207 282 13 13 chr5 185437394 185437472 -17648060 + (TGAA)n Simple_repeat Simple_repeat 4 81 0 21 0 0 0 chr5 185438205 185438226 -17647306 + AT_rich Low_complexity Low_complexity 1 21 0 221 349 12 12 chr5 185439121 185439207 -17646325 - MIR SINE MIR -120 142 57 1699 159 17 33 chr5 185439386 185439688 -17645844 - AluJo SINE Alu -9 303 7 320 333 93 31 chr5 185440467 185440788 -17644744 + L1ME3 LINE L1 809 1149 -5973 386 295 98 49 chr5 185441155 185441659 -17643873 + L1ME3 LINE L1 1348 1826 -5296 1666 111 4 0 chr5 185441659 185441903 -17643629 + L1MA1 LINE L1 6054 6298 -4 386 295 98 49 chr5 185441903 185442472 -17643060 + L1ME3 LINE L1 1826 2701 -4421 1278 242 30 76 chr5 185442641 185443466 -17642066 + L1ME3 LINE L1 5980 6793 -164 209 295 33 0 chr5 185443757 185443818 -17641714 + L2 LINE L2 3250 3312 -1 8971 220 51 44 chr5 185443879 185445583 -17639949 + L1PBa LINE L1 6 1697 -5165 2333 96 0 3 chr5 185445583 185445884 -17639648 + AluSg SINE Alu 1 300 -10 8971 220 51 44 chr5 185445884 185446621 -17638911 + L1PBa LINE L1 1697 2428 -4434 2143 131 3 0 chr5 185446621 185446927 -17638605 + AluSg SINE Alu 1 307 -3 8971 220 51 44 chr5 185446927 185448402 -17637130 + L1PBa LINE L1 2428 3892 -2970 197 33 33 0 chr5 185448402 185448432 -17637100 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8971 220 51 44 chr5 185448432 185450195 -17635337 + L1PBa LINE L1 3892 5678 -1184 1140 250 142 14 chr5 185450506 185450942 -17634590 - L2 LINE L2 -1182 2132 1641 566 197 143 33 chr5 185450942 185451186 -17634346 - LTR37B LTR ERV1 0 468 198 274 330 39 0 chr5 185451536 185451639 -17633893 - LTR37B LTR ERV1 -357 111 5 614 272 78 9 chr5 185451648 185451865 -17633667 - L2 LINE L2 -1670 1644 1413 378 302 9 9 chr5 185451930 185452046 -17633486 - L2 LINE L2 -2112 1202 1087 247 166 59 35 chr5 185452897 185453066 -17632466 + (CACAC)n Simple_repeat Simple_repeat 3 175 0 1445 134 5 5 chr5 185453283 185453506 -17632026 - AluSg/x SINE Alu -2 310 88 459 81 27 0 chr5 185454515 185454589 -17630943 - MADE1 DNA Mariner -4 76 1 180 0 0 0 chr5 185455029 185455049 -17630483 + (A)n Simple_repeat Simple_repeat 1 20 0 1697 278 48 21 chr5 185457111 185457722 -17627810 + L1ME3A LINE L1 5401 6027 -143 239 167 42 42 chr5 185457726 185457798 -17627734 + L1ME3A LINE L1 6099 6170 0 273 297 123 20 chr5 185457873 185458154 -17627378 - L1ME4a LINE L1 -197 5924 5599 2272 109 0 0 chr5 185458154 185458447 -17627085 + AluSx SINE Alu 1 293 -19 273 297 123 20 chr5 185458447 185458515 -17627017 - L1ME4a LINE L1 -522 5599 5539 24 85 0 0 chr5 185458577 185458636 -17626896 + AT_rich Low_complexity Low_complexity 1 59 0 33 25 0 0 chr5 185459005 185459045 -17626487 + AT_rich Low_complexity Low_complexity 1 40 0 28 29 0 0 chr5 185459131 185459166 -17626366 + AT_rich Low_complexity Low_complexity 1 35 0 1146 294 45 45 chr5 185459277 185459767 -17625765 - MLT1K LTR MaLR -86 502 13 279 303 37 94 chr5 185459994 185460238 -17625294 - L3 LINE CR1 -904 673 444 470 132 0 0 chr5 185460347 185460423 -17625109 - L1PA5 LINE L1 -2 6152 6077 1813 57 0 16 chr5 185460423 185460669 -17624863 + L1PA5 LINE L1 5850 6091 -63 2173 98 25 0 chr5 185462375 185462661 -17622871 + AluSx SINE Alu 7 299 -13 813 293 18 9 chr5 185464542 185464771 -17620761 - MIR SINE MIR 0 262 32 279 0 0 0 chr5 185464777 185464808 -17620724 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2423 43 0 0 chr5 185464809 185465139 -17620393 - AluY SINE Alu 0 335 6 252 306 83 45 chr5 185465175 185465417 -17620115 + L2 LINE L2 3042 3292 -21 1468 194 14 14 chr5 185466021 185466304 -17619228 + AluJb SINE Alu 2 284 -28 2258 84 0 10 chr5 185466781 185467080 -17618452 - AluY SINE Alu -15 296 1 630 261 38 42 chr5 185467312 185467573 -17617959 - MIR SINE MIR 0 262 3 1182 151 0 0 chr5 185467611 185467796 -17617736 - AluSg/x SINE Alu -5 305 121 274 277 32 11 chr5 185468428 185468522 -17617010 - MIR3 SINE MIR -9 199 104 864 272 65 72 chr5 185468654 185469114 -17616418 + LTR16A1 LTR ERVL 1 457 0 404 365 7 6 chr5 185471515 185471697 -17613835 - MIR SINE MIR -26 236 56 2525 37 3 0 chr5 185473152 185473450 -17612082 + AluY SINE Alu 1 299 -12 194 268 0 0 chr5 185474145 185474186 -17611346 + L2 LINE L2 3034 3074 -239 207 114 0 0 chr5 185474400 185474435 -17611097 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 206 268 36 0 chr5 185474598 185474654 -17610878 - MIR SINE MIR 0 262 205 13089 134 27 35 chr5 185474735 185477057 -17608475 - Tigger1 DNA MER2_type -25 2393 92 1444 206 48 0 chr5 185477055 185477366 -17608166 + MER2 DNA MER2_type 17 342 -3 * 181 338 0 25 chr5 185477600 185477680 -17607852 - MIR3 SINE MIR -11 197 120 244 276 26 0 chr5 185478805 185478881 -17606651 + MIR3 SINE MIR 117 194 -14 22 0 0 0 chr5 185480324 185480346 -17605186 + AT_rich Low_complexity Low_complexity 1 22 0 267 226 19 57 chr5 185481373 185481479 -17604053 - L1MEc LINE L1 -4750 1646 1545 4586 246 51 44 chr5 185481583 185484697 -17600835 + L1M4 LINE L1 204 3449 -3195 1737 153 18 0 chr5 185484830 185485104 -17600428 + AluSq SINE Alu 1 279 -34 2301 76 0 7 chr5 185485851 185486153 -17599379 - AluSx SINE Alu -12 300 1 196 306 32 16 chr5 185486449 185486511 -17599021 - MIR3 SINE MIR -48 160 98 235 339 176 0 chr5 185487074 185487239 -17598293 - MIR SINE MIR -56 206 13 349 155 0 0 chr5 185487524 185487582 -17597950 + FRAM/FAM SINE Alu 1 58 -117 2324 190 19 0 chr5 185487583 185487999 -17597533 - MSTB LTR MaLR -2 424 1 524 174 0 41 chr5 185487999 185488097 -17597435 + FRAM SINE Alu 53 146 -30 266 0 0 29 chr5 185488101 185488136 -17597396 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 398 246 56 73 chr5 185488145 185488321 -17597211 - L1MC4 LINE L1 -1 8041 7872 1109 234 35 69 chr5 185488321 185488614 -17596918 - MLT1A1 LTR MaLR -2 363 84 2250 84 20 0 chr5 185488614 185488910 -17596622 - AluSc SINE Alu -7 302 1 1109 234 35 69 chr5 185488910 185488992 -17596540 - MLT1A1 LTR MaLR -281 84 1 398 246 56 73 chr5 185488992 185489156 -17596376 - L1MC4 LINE L1 -170 7872 7707 2146 115 3 7 chr5 185489230 185489534 -17595998 + AluSq SINE Alu 1 303 -10 368 290 56 46 chr5 185489550 185489940 -17595592 - L1MC5 LINE L1 -448 7513 7261 242 231 26 13 chr5 185489964 185490042 -17595490 - L1MC5 LINE L1 -733 7228 7150 746 228 43 5 chr5 185490272 185490456 -17595076 - L1MC4 LINE L1 -1149 6893 6703 736 277 62 16 chr5 185490602 185490923 -17594609 - L1M4 LINE L1 -1034 5112 4777 1923 142 164 11 chr5 185490924 185491290 -17594242 - MSTA LTR MaLR 0 428 7 318 297 70 0 chr5 185491295 185491423 -17594109 - L1M4 LINE L1 -1366 4780 4644 1084 273 82 25 chr5 185491425 185491934 -17593598 - L1M4 LINE L1 -1592 4554 4017 817 267 123 10 chr5 185492072 185492675 -17592857 - L1M4 LINE L1 -2728 3418 2748 24 0 0 0 chr5 185492704 185492728 -17592804 + AT_rich Low_complexity Low_complexity 1 24 0 3440 262 49 63 chr5 185492730 185493313 -17592219 - L1M4 LINE L1 -793 5353 4763 180 111 0 0 chr5 185493313 185493340 -17592192 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3440 262 49 63 chr5 185493340 185494024 -17591508 - L1M4 LINE L1 -1383 4763 4117 2292 71 10 7 chr5 185494024 185494318 -17591214 - AluY SINE Alu -16 295 1 3440 262 49 63 chr5 185494318 185494819 -17590713 - L1M4 LINE L1 -2029 4117 3610 281 307 13 0 chr5 185494941 185495016 -17590516 - L2 LINE L2 -1 3312 3237 2228 100 6 0 chr5 185495415 185495726 -17589806 - AluSp SINE Alu 0 313 1 237 159 0 0 chr5 185496972 185497016 -17588516 + A-rich Low_complexity Low_complexity 1 44 0 27 29 0 0 chr5 185497783 185497817 -17587715 + AT_rich Low_complexity Low_complexity 1 34 0 1449 183 56 11 chr5 185497931 185498215 -17587317 - AluJo SINE Alu -10 302 6 2407 61 3 10 chr5 185498776 185499089 -17586443 - AluY SINE Alu 0 311 1 303 337 0 0 chr5 185499137 185499238 -17586294 + MIR SINE MIR 161 261 -1 180 289 58 0 chr5 185499763 185499815 -17585717 + MIR SINE MIR 206 260 -2 2236 117 0 0 chr5 185501528 185501826 -17583706 + AluSg SINE Alu 1 298 -12 1782 157 37 57 chr5 185501964 185502411 -17583121 + THE1C LTR MaLR 1 428 0 9223 126 51 39 chr5 185502411 185503972 -17581560 + THE1C-int LTR MaLR 1 1580 0 2509 125 0 5 chr5 185503972 185504346 -17581186 + THE1C LTR MaLR 3 375 0 901 329 63 7 chr5 185504538 185505000 -17580532 + LTR16C LTR ERVL 1 488 -3 446 256 105 0 chr5 185505107 185505240 -17580292 + MIR SINE MIR 72 218 -44 384 361 38 17 chr5 185505870 185506108 -17579424 + MIR SINE MIR 20 262 0 24 67 0 0 chr5 185506108 185506153 -17579379 + AT_rich Low_complexity Low_complexity 1 45 0 205 278 9 93 chr5 185506433 185506541 -17578991 - MIR SINE MIR -4 258 160 242 73 24 0 chr5 185506665 185506706 -17578826 + (TG)n Simple_repeat Simple_repeat 1 42 0 2025 200 3 13 chr5 185507030 185507420 -17578112 + MLT1B LTR MaLR 1 386 -4 1952 156 6 31 chr5 185508109 185508462 -17577070 - MER2 DNA MER2_type 0 344 1 311 320 73 13 chr5 185508881 185509031 -17576501 + MIR SINE MIR 16 174 -88 305 266 105 21 chr5 185509040 185509183 -17576349 - LTR16C LTR ERVL -10 481 327 404 219 36 66 chr5 185509697 185509752 -17575780 + L1ME LINE L1 5563 5618 -546 5617 91 24 23 chr5 185509752 185510577 -17574955 - LTR12 LTR ERV1 0 826 1 404 219 36 66 chr5 185510577 185510658 -17574874 + L1ME LINE L1 5618 5695 -469 236 244 198 0 chr5 185510785 185510871 -17574661 + MIR SINE MIR 160 262 0 201 159 68 0 chr5 185511049 185511093 -17574439 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 39 68 0 0 chr5 185511557 185511631 -17573901 + AT_rich Low_complexity Low_complexity 1 74 0 272 300 108 39 chr5 185511955 185512085 -17573447 - L2 LINE L2 -1 3271 3133 2089 117 0 3 chr5 185512136 185512418 -17573114 + AluSq SINE Alu 1 281 -32 378 143 0 0 chr5 185512418 185512481 -17573051 + (CA)n Simple_repeat Simple_repeat 2 64 0 1216 168 0 0 chr5 185512630 185512820 -17572712 + AluSx SINE Alu 1 190 -122 670 108 0 0 chr5 185513428 185513521 -17572011 + AluJ/FLAM SINE Alu 1 93 -219 314 339 94 59 chr5 185513567 185513972 -17571560 + L1ME LINE L1 4528 4968 -1178 1814 195 43 3 chr5 185513972 185514347 -17571185 - MLT1B LTR MaLR 0 390 1 314 339 94 59 chr5 185514347 185514623 -17570909 + L1ME LINE L1 4968 5233 -913 322 262 37 30 chr5 185514895 185515059 -17570473 + L1ME LINE L1 5527 5691 -430 2130 130 0 7 chr5 185515299 185515607 -17569925 - AluSg SINE Alu -4 306 1 2344 97 0 0 chr5 185516613 185516911 -17568621 - AluSq SINE Alu -13 300 3 490 156 0 0 chr5 185516928 185517005 -17568527 - AluSq SINE Alu -102 211 135 180 111 0 0 chr5 185517006 185517033 -17568499 + (TA)n Simple_repeat Simple_repeat 1 27 0 356 261 23 0 chr5 185517033 185517121 -17568411 - L1MC4 LINE L1 -1339 6703 6614 340 272 0 22 chr5 185517047 185517139 -17568393 + L1MC4 LINE L1 6614 6703 -1339 * 301 196 0 0 chr5 185517137 185517193 -17568339 - L1MC4 LINE L1 -1339 6703 6648 * 2205 85 0 7 chr5 185517214 185517519 -17568013 - AluY SINE Alu 0 303 1 981 81 0 0 chr5 185517529 185517652 -17567880 - AluSc SINE Alu -186 123 1 360 338 45 0 chr5 185518631 185518785 -17566747 + MIR SINE MIR 37 197 -65 1528 199 3 18 chr5 185519737 185520023 -17565509 + AluJo SINE Alu 1 282 -30 316 177 48 0 chr5 185520271 185520333 -17565199 + MLT1I LTR MaLR 101 165 -244 2042 127 3 13 chr5 185520519 185520826 -17564706 + AluSx SINE Alu 1 304 -8 180 325 12 12 chr5 185521921 185522001 -17563531 - MIR SINE MIR -3 259 180 231 203 0 0 chr5 185522001 185522065 -17563467 + T-rich Low_complexity Low_complexity 3 66 0 369 250 30 15 chr5 185522166 185522298 -17563234 - L1MC4 LINE L1 -2320 5488 5355 569 80 11 0 chr5 185523046 185523134 -17562398 + (TTTAA)n Simple_repeat Simple_repeat 4 92 0 439 220 38 23 chr5 185523235 185523367 -17562165 - L1MC4 LINE L1 -2320 5488 5355 242 339 121 59 chr5 185523398 185523893 -17561639 - L2 LINE L2 -15 3298 2747 890 176 21 16 chr5 185523893 185524080 -17561452 - MER53 DNA DNA 0 189 2 242 339 121 59 chr5 185524080 185524135 -17561397 - L2 LINE L2 -566 2747 2697 * 282 294 0 84 chr5 185524130 185524249 -17561283 - MIR SINE MIR -150 112 4 194 0 39 0 chr5 185524583 185524609 -17560923 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 1552 188 109 3 chr5 185524676 185525005 -17560527 - MLT1A1 LTR MaLR -1 364 1 377 259 74 19 chr5 185525039 185525255 -17560277 + L1MC4a LINE L1 5291 5518 -2290 4312 57 4 0 chr5 185525329 185525874 -17559658 - L1PA7 LINE L1 -11 6143 5597 1209 149 0 0 chr5 185525876 185526070 -17559462 - L1P3 LINE L1 -6260 201 8 351 256 211 45 chr5 185526119 185526361 -17559171 + L1MC4a LINE L1 5658 5939 -1869 218 160 20 0 chr5 185526379 185526429 -17559103 + (TA)n Simple_repeat Simple_repeat 2 52 0 294 29 0 0 chr5 185526776 185526811 -17558721 + (CA)n Simple_repeat Simple_repeat 1 35 0 539 265 29 7 chr5 185526929 185527065 -17558467 + MIR SINE MIR 31 169 -93 24 0 0 0 chr5 185527241 185527265 -17558267 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 185528596 185528617 -17556915 + AT_rich Low_complexity Low_complexity 1 21 0 221 57 29 0 chr5 185528935 185528970 -17556562 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 184 326 138 54 chr5 185529145 185529369 -17556163 - L2 LINE L2 -585 2729 2487 411 289 51 46 chr5 185530268 185530465 -17555067 - MLT1J1 LTR MaLR -26 420 223 342 284 101 20 chr5 185530505 185530653 -17554879 - MLT1J1 LTR MaLR -286 160 1 585 238 31 22 chr5 185530669 185530896 -17554636 - L1MEc LINE L1 -2998 3943 3715 1179 165 64 0 chr5 185530912 185531148 -17554384 + L1PA13 LINE L1 4949 5199 -947 1635 129 33 120 chr5 185531175 185531301 -17554231 + AluSx SINE Alu 1 136 -176 2142 112 7 0 chr5 185531301 185531588 -17553944 + AluSx SINE Alu 1 289 -23 1635 129 33 120 chr5 185531588 185531795 -17553737 + AluSx SINE Alu 136 305 -7 6127 89 15 14 chr5 185531820 185532793 -17552739 + L1PA13 LINE L1 5189 6163 0 1299 307 79 20 chr5 185532812 185534415 -17551117 - L1MEc LINE L1 -3238 3703 2030 365 253 132 91 chr5 185534429 185534668 -17550864 - L1MEc LINE L1 -5032 1912 1684 2420 69 0 3 chr5 185534668 185534973 -17550559 - AluY SINE Alu -6 305 2 1634 144 52 7 chr5 185534974 185535244 -17550288 - AluSx SINE Alu -30 282 1 365 253 132 91 chr5 185535244 185535342 -17550190 - L1MEc LINE L1 -5259 1685 1559 272 326 51 29 chr5 185535380 185535555 -17549977 - L1MEc LINE L1 -5071 1352 1174 198 0 0 0 chr5 185536140 185536162 -17549370 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 23 0 0 0 chr5 185536339 185536362 -17549170 + AT_rich Low_complexity Low_complexity 1 23 0 227 274 32 21 chr5 185537032 185537127 -17548405 + (TATATG)n Simple_repeat Simple_repeat 4 99 0 * 243 286 23 15 chr5 185537035 185537168 -17548364 + (TA)n Simple_repeat Simple_repeat 1 134 0 1858 166 0 0 chr5 185537531 185537840 -17547692 + AluSx SINE Alu 1 309 0 281 299 161 35 chr5 185538041 185538813 -17546719 - L1M4 LINE L1 -1399 4747 3879 1895 160 27 24 chr5 185539866 185540240 -17545292 - THE1C LTR MaLR 0 375 1 372 284 9 52 chr5 185540254 185540370 -17545162 + L2 LINE L2 3191 3301 -12 310 295 54 8 chr5 185540501 185540630 -17544902 - MIR SINE MIR -4 258 124 1275 188 69 22 chr5 185543098 185543375 -17542157 + AluJb SINE Alu 4 293 -19 2197 65 44 0 chr5 185544227 185544536 -17540996 - AluY SINE Alu 0 321 1 1592 194 3 3 chr5 185545592 185545886 -17539646 - AluJo SINE Alu -16 296 3 314 341 110 6 chr5 185546854 185547036 -17538496 - L2 LINE L2 -684 2630 2430 1750 256 36 14 chr5 185547656 185548149 -17537383 + MLT1D LTR MaLR 2 505 0 301 303 64 73 chr5 185548149 185548367 -17537165 + MIR SINE MIR 5 220 -42 2193 99 11 55 chr5 185549260 185549560 -17535972 + THE1A LTR MaLR 2 286 -69 2142 68 0 44 chr5 185549560 185549904 -17535628 - AluY SINE Alu 0 331 1 2193 99 11 55 chr5 185549904 185549966 -17535566 + THE1A LTR MaLR 286 349 -6 24 32 0 0 chr5 185550092 185550123 -17535409 + AT_rich Low_complexity Low_complexity 1 31 0 2279 104 0 0 chr5 185550627 185550935 -17534597 - AluSc SINE Alu -1 308 1 23 33 0 0 chr5 185552663 185552693 -17532839 + AT_rich Low_complexity Low_complexity 1 30 0 232 200 0 18 chr5 185552696 185552751 -17532781 + MIR SINE MIR 191 244 -18 453 283 21 29 chr5 185553780 185553961 -17531571 + MER5B DNA MER1_type 9 175 -3 2271 103 0 10 chr5 185554292 185554602 -17530930 + AluSg SINE Alu 3 309 -1 234 214 184 58 chr5 185554696 185554799 -17530733 - MLT1K LTR MaLR -18 570 455 261 291 121 30 chr5 185554985 185555150 -17530382 - MLT1L LTR MaLR -346 269 90 1046 159 11 6 chr5 185556159 185556335 -17529197 + MER2 DNA MER2_type 2 178 -167 317 240 27 0 chr5 185556383 185556458 -17529074 + MER2 DNA MER2_type 269 345 0 237 229 64 73 chr5 185556810 185556919 -17528613 - MLT1K LTR MaLR -334 254 147 2375 238 136 11 chr5 185557070 185557889 -17527643 + L1MC4 LINE L1 6944 7872 -170 2172 102 7 3 chr5 185557889 185558194 -17527338 - AluSp SINE Alu -7 306 1 2375 238 136 11 chr5 185558194 185558212 -17527320 + L1MC4 LINE L1 7872 7886 -156 2279 82 0 7 chr5 185558854 185559157 -17526375 + AluY SINE Alu 2 302 -9 234 0 0 0 chr5 185559535 185559561 -17525971 + (T)n Simple_repeat Simple_repeat 1 26 0 321 26 0 0 chr5 185560107 185560145 -17525387 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 347 191 0 11 chr5 185560314 185560403 -17525129 + GA-rich Low_complexity Low_complexity 3 90 0 209 156 0 22 chr5 185560440 185560485 -17525047 + GA-rich Low_complexity Low_complexity 3 46 0 257 167 0 33 chr5 185560522 185560582 -17524950 + GA-rich Low_complexity Low_complexity 3 60 0 248 128 0 21 chr5 185560824 185560871 -17524661 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 224 200 0 0 chr5 185561038 185561078 -17524454 + (TG)n Simple_repeat Simple_repeat 2 41 0 201 159 0 0 chr5 185561713 185561757 -17523775 + GA-rich Low_complexity Low_complexity 1 44 0 489 268 47 76 chr5 185564149 185564425 -17521107 - L2 LINE L2 0 3313 3046 216 0 0 0 chr5 185564436 185564460 -17521072 + (T)n Simple_repeat Simple_repeat 1 24 0 29 0 0 0 chr5 185565175 185565204 -17520328 + AT_rich Low_complexity Low_complexity 1 29 0 334 323 31 0 chr5 185565434 185565564 -17519968 - MER94 DNA DNA 0 134 1 485 270 46 7 chr5 185566137 185566289 -17519243 + L2 LINE L2 3152 3309 -4 255 306 122 55 chr5 185566312 185566583 -17518949 + L2 LINE L2 3021 3309 -4 * 388 295 25 8 chr5 185566562 185566684 -17518848 + MIR SINE MIR 105 228 -34 240 379 48 35 chr5 185566725 185566952 -17518580 + L2 LINE L2 2675 2904 -410 198 398 56 0 chr5 185567118 185567226 -17518306 + L2 LINE L2 3169 3282 -31 * 586 331 136 29 chr5 185567225 185567520 -17518012 + L2 LINE L2 1423 1784 -1530 1970 114 20 23 chr5 185567520 185567819 -17517713 - AluSg SINE Alu -11 299 2 586 331 136 29 chr5 185567819 185567973 -17517559 + L2 LINE L2 1784 1920 -1394 2666 267 90 58 chr5 185567989 185569619 -17515913 - L1MC4 LINE L1 -2 8040 6359 201 175 0 0 chr5 185569687 185569727 -17515805 + CT-rich Low_complexity Low_complexity 3 42 0 49 52 0 0 chr5 185569826 185569903 -17515629 + AT_rich Low_complexity Low_complexity 1 77 0 375 213 201 84 chr5 185569927 185570260 -17515272 - L1MC4a LINE L1 -1684 6124 5753 3733 153 12 144 chr5 185570278 185571029 -17514503 + MER6 DNA MER2_type 1 589 -276 2409 66 0 3 chr5 185571029 185571332 -17514200 - AluY SINE Alu -9 302 1 3733 153 12 144 chr5 185571332 185571577 -17513955 + MER6 DNA MER2_type 589 865 0 1444 242 40 28 chr5 185571580 185572051 -17513481 - L1MC4a LINE L1 -2075 5733 5257 339 283 75 37 chr5 185572217 185572404 -17513128 - L1MC4a LINE L1 -1081 5065 4872 286 290 43 68 chr5 185572447 185572582 -17512950 - HAL1b LINE L1 -979 369 232 2276 78 16 10 chr5 185572582 185572891 -17512641 + AluY SINE Alu 1 311 0 286 290 43 68 chr5 185572891 185573107 -17512425 - HAL1b LINE L1 -1116 232 27 189 0 0 0 chr5 185573534 185573555 -17511977 + (TTA)n Simple_repeat Simple_repeat 2 22 0 347 169 28 14 chr5 185573557 185573628 -17511904 - FLAM_A SINE Alu -16 117 46 1277 286 205 17 chr5 185574214 185574911 -17510621 + L2 LINE L2 1912 2739 -575 4458 100 10 35 chr5 185574918 185575208 -17510324 - L1PA14 LINE L1 -9 6152 5856 2259 113 0 0 chr5 185575208 185575518 -17510014 + AluSx SINE Alu 1 310 -2 4458 100 10 35 chr5 185575518 185575917 -17509615 - L1PA14 LINE L1 -305 5856 5480 23 33 0 0 chr5 185575928 185575958 -17509574 + AT_rich Low_complexity Low_complexity 1 30 0 425 159 26 3 chr5 185576130 185576246 -17509286 - L1ME LINE L1 -691 5477 5355 897 320 83 1 chr5 185576246 185576733 -17508799 + L2 LINE L2 2755 3293 -20 264 356 30 23 chr5 185577310 185577442 -17508090 - MIR3 SINE MIR -29 179 47 483 212 0 146 chr5 185577451 185577677 -17507855 + 7SK RNA RNA 1 193 0 1859 131 45 3 chr5 185577710 185578001 -17507531 - AluSx SINE Alu -3 309 7 233 167 19 0 chr5 185578243 185578297 -17507235 + (TA)n Simple_repeat Simple_repeat 1 55 0 620 288 83 29 chr5 185578510 185578885 -17506647 - MLT1L LTR MaLR -57 558 164 556 286 27 2 chr5 185579216 185579440 -17506092 - L1MDa LINE L1 -2500 4040 3812 443 223 55 30 chr5 185579445 185579647 -17505885 - L1MDa LINE L1 -2877 3663 3457 450 59 0 94 chr5 185579647 185579732 -17505800 + L1PA6 LINE L1 6078 6154 0 916 309 31 6 chr5 185579754 185580107 -17505425 + L1MEc LINE L1 1455 1816 -4580 22 56 0 0 chr5 185580107 185580143 -17505389 + AT_rich Low_complexity Low_complexity 1 36 0 2043 236 43 7 chr5 185580143 185580744 -17504788 - L1MDa LINE L1 -3079 3461 2839 475 289 27 27 chr5 185580876 185581132 -17504400 - L1MDa LINE L1 -3744 2796 2541 876 83 0 0 chr5 185581135 185581255 -17504277 - L1PA11 LINE L1 0 6174 6055 11070 48 5 1 chr5 185581270 185583415 -17502117 - L1PA6 LINE L1 -15 6139 3988 1324 120 0 0 chr5 185583420 185583612 -17501920 - L1P3 LINE L1 -6259 202 11 2687 82 7 2 chr5 185583616 185584032 -17501500 - L1PA11 LINE L1 -108 6066 5509 1476 278 49 35 chr5 185584026 185584800 -17500732 - L1MDa LINE L1 -3990 2550 1766 * 272 359 53 36 chr5 185585004 185585305 -17500227 - L1MDa LINE L1 -6208 332 27 184 379 11 0 chr5 185586453 185586540 -17498992 + MIR SINE MIR 66 153 -109 1785 186 0 3 chr5 185586546 185586852 -17498680 - AluSx SINE Alu -7 305 1 1321 247 29 64 chr5 185586913 185587301 -17498231 - MLT1D LTR MaLR 0 505 138 2096 132 0 22 chr5 185587301 185587612 -17497920 + AluSx SINE Alu 3 306 -6 1321 247 29 64 chr5 185587612 185587741 -17497791 - MLT1D LTR MaLR -367 138 6 199 290 20 80 chr5 185587767 185587867 -17497665 + MIR SINE MIR 115 208 -54 22 56 0 0 chr5 185587933 185587969 -17497563 + AT_rich Low_complexity Low_complexity 1 36 0 509 355 0 5 chr5 185588000 185588197 -17497335 + MIR SINE MIR 67 262 0 1219 156 5 24 chr5 185588233 185588438 -17497094 - AluJb SINE Alu -25 287 87 216 356 50 78 chr5 185589080 185589462 -17496070 + L2 LINE L2 2897 3267 -5 2963 106 19 5 chr5 185589765 185590191 -17495341 - MLT2A1 LTR ERVL -12 432 1 207 366 81 24 chr5 185591277 185591400 -17494132 - L2 LINE L2 -10 3262 3133 649 76 61 0 chr5 185591693 185591824 -17493708 + (TG)n Simple_repeat Simple_repeat 2 140 0 21 0 0 0 chr5 185591928 185591949 -17493583 + AT_rich Low_complexity Low_complexity 1 21 0 1027 197 0 0 chr5 185592026 185592214 -17493318 - Tigger7 DNA MER2_type 0 2487 2300 * 1426 204 41 4 chr5 185592211 185592481 -17493051 - Tigger7 DNA MER2_type -453 280 1 883 266 55 58 chr5 185592577 185592938 -17492594 + MLT1A1 LTR MaLR 1 360 -5 249 275 237 8 chr5 185593352 185593483 -17492049 - MLT1I LTR MaLR -2 407 247 553 259 139 0 chr5 185593807 185593877 -17491655 + MER5A DNA MER1_type 1 60 -129 2143 129 3 3 chr5 185593877 185594186 -17491346 + AluSx SINE Alu 1 309 -3 553 259 139 0 chr5 185594186 185594281 -17491251 + MER5A DNA MER1_type 60 189 0 294 294 101 8 chr5 185594389 185594508 -17491024 - MIR SINE MIR -2 260 131 2414 40 0 0 chr5 185595071 185595346 -17490186 + AluY SINE Alu 35 309 -2 1579 217 87 41 chr5 185595468 185595951 -17489581 - MLT1D LTR MaLR 0 505 1 2876 7 0 0 chr5 185596387 185596697 -17488835 - AluYb8 SINE Alu -8 310 1 268 328 56 60 chr5 185596968 185597200 -17488332 - MIR SINE MIR -3 259 29 480 282 114 0 chr5 185598769 185598918 -17486614 + MIR3 SINE MIR 37 202 -6 1754 167 9 43 chr5 185599262 185599614 -17485918 + AluJo SINE Alu 1 341 0 429 269 34 20 chr5 185600036 185600157 -17485375 - MIR3 SINE MIR -28 180 56 759 179 0 35 chr5 185600434 185600579 -17484953 + MER31B LTR ERV1 5 144 -322 1149 189 0 43 chr5 185600580 185600813 -17484719 + AluJb SINE Alu 87 309 -3 790 209 116 54 chr5 185600824 185601082 -17484450 + MER31B LTR ERV1 193 466 0 3593 140 13 25 chr5 185602204 185602811 -17482721 - MER4A LTR ERV1 0 600 1 297 331 176 0 chr5 185603420 185603562 -17481970 + MIR3 SINE MIR 42 208 0 26 30 0 0 chr5 185605340 185605373 -17480159 + AT_rich Low_complexity Low_complexity 1 33 0 211 208 0 21 chr5 185605723 185605771 -17479761 + (ATG)n Simple_repeat Simple_repeat 2 48 0 399 293 178 22 chr5 185605799 185606024 -17479508 + MIR SINE MIR 3 262 0 402 285 46 8 chr5 185606040 185606170 -17479362 - MIR SINE MIR -85 177 43 282 282 79 62 chr5 185606178 185606405 -17479127 - HERVL LTR ERVL -4264 1390 1160 414 0 0 0 chr5 185606549 185606595 -17478937 + (TA)n Simple_repeat Simple_repeat 1 46 0 282 271 65 19 chr5 185607079 185607186 -17478346 - HERVL LTR ERVL -5283 481 370 560 275 138 29 chr5 185608108 185608384 -17477148 - MLT1K LTR MaLR -122 466 161 222 290 38 61 chr5 185608959 185609090 -17476442 + MIR SINE MIR 132 259 -3 246 287 41 49 chr5 185609371 185609493 -17476039 - MIR SINE MIR -58 204 84 369 0 0 0 chr5 185610121 185610162 -17475370 + (CA)n Simple_repeat Simple_repeat 2 42 0 195 42 0 0 chr5 185611986 185612010 -17473522 + (A)n Simple_repeat Simple_repeat 1 24 0 324 333 48 26 chr5 185612670 185612859 -17472673 + MIR SINE MIR 56 248 -14 247 374 65 9 chr5 185613115 185613222 -17472310 - MIR SINE MIR -123 139 27 2379 43 4 0 chr5 185614356 185614636 -17470896 + AluY SINE Alu 17 297 -14 278 245 20 10 chr5 185615836 185615938 -17469594 + (TA)n Simple_repeat Simple_repeat 2 104 0 309 260 21 31 chr5 185617603 185617699 -17467833 + L2 LINE L2 2508 2602 -712 333 371 55 39 chr5 185617727 185618237 -17467295 + L2 LINE L2 2725 3246 -67 219 167 0 0 chr5 185619531 185619573 -17465959 + (TG)n Simple_repeat Simple_repeat 2 43 0 278 296 46 19 chr5 185620530 185620638 -17464894 - MIR3 SINE MIR -2 206 96 260 288 123 24 chr5 185621045 185621337 -17464195 - L1ME4a LINE L1 -178 5943 5623 2352 101 0 13 chr5 185621422 185621738 -17463794 + AluSx SINE Alu 1 312 0 1904 166 0 0 chr5 185622194 185622509 -17463023 + AluSx SINE Alu 1 315 0 242 341 76 30 chr5 185622876 185623100 -17462432 + MIR SINE MIR 8 252 -10 2106 104 0 7 chr5 185625034 185625322 -17460210 - AluSq SINE Alu -27 286 1 23 0 0 0 chr5 185627933 185627956 -17457576 + AT_rich Low_complexity Low_complexity 1 23 0 1471 293 137 29 chr5 185628203 185629445 -17456087 - L2 LINE L2 -4 3309 1944 1607 236 50 48 chr5 185629532 185630015 -17455517 - MLT1D LTR MaLR 0 505 22 1739 316 110 18 chr5 185630040 185630815 -17454717 - L2 LINE L2 -1568 1746 901 729 132 9 0 chr5 185631643 185631749 -17453783 + AluSq/x SINE Alu 1 107 -206 260 322 96 76 chr5 185631861 185631921 -17453611 + L2 LINE L2 2898 2955 -358 2019 130 3 10 chr5 185631921 185632222 -17453310 + AluSg SINE Alu 1 299 -11 260 322 96 76 chr5 185632222 185632568 -17452964 + L2 LINE L2 2955 3312 -1 21 0 0 0 chr5 185632728 185632749 -17452783 + AT_rich Low_complexity Low_complexity 1 21 0 180 216 59 0 chr5 185632833 185632884 -17452648 - MIR SINE MIR -116 146 93 181 309 15 15 chr5 185633483 185633551 -17451981 - L3 LINE CR1 -564 1013 946 250 320 173 37 chr5 185633560 185633821 -17451711 - L2 LINE L2 -36 3236 2935 512 272 121 25 chr5 185633821 185634060 -17451472 - MIR SINE MIR 0 262 1 238 301 36 0 chr5 185634109 185634192 -17451340 - L3 LINE CR1 -688 889 804 310 230 11 35 chr5 185634425 185634512 -17451020 - MARNA DNA Mariner -291 295 211 282 282 242 32 chr5 185634524 185634776 -17450756 + L2 LINE L2 2888 3192 -121 391 87 0 87 chr5 185634783 185634852 -17450680 - MER3 DNA MER1_type -4 205 143 2997 236 50 9 chr5 185634859 185635773 -17449759 + L1ME1 LINE L1 5119 6152 -14 1184 257 38 13 chr5 185635888 185635960 -17449572 - LTR52 LTR ERVL -3 418 349 330 26 0 0 chr5 185635960 185635999 -17449533 + (CA)n Simple_repeat Simple_repeat 1 39 0 1184 257 38 13 chr5 185635999 185636323 -17449209 - LTR52 LTR ERVL -72 349 12 1928 142 26 14 chr5 185636881 185637233 -17448299 - L1MA3 LINE L1 -105 6200 5845 1400 61 0 0 chr5 185637333 185637513 -17448019 + L1PA4 LINE L1 5976 6155 0 261 306 99 36 chr5 185637564 185637675 -17447857 - L2 LINE L2 -5 3267 3150 3029 179 29 35 chr5 185637945 185638567 -17446965 - L1MB5 LINE L1 -39 6135 5518 23 0 0 0 chr5 185638632 185638655 -17446877 + AT_rich Low_complexity Low_complexity 1 23 0 1198 173 151 0 chr5 185639798 185640076 -17445456 + MER46B DNA MER2_type 1 195 -41 873 308 27 27 chr5 185640180 185640654 -17444878 + L1MC4a LINE L1 5587 6060 -1748 2313 84 0 16 chr5 185643011 185643320 -17442212 - AluY SINE Alu -7 304 1 1595 146 12 113 chr5 185643373 185643542 -17441990 - AluSx SINE Alu 0 302 182 2395 75 3 7 chr5 185643542 185643850 -17441682 - AluY SINE Alu 0 311 5 1595 146 12 113 chr5 185643850 185644016 -17441516 - AluSx SINE Alu -120 182 1 601 203 8 8 chr5 185645393 185645511 -17440021 + AluSg/x SINE Alu 192 309 -3 28 29 0 0 chr5 185645635 185645670 -17439862 + AT_rich Low_complexity Low_complexity 1 35 0 408 309 100 56 chr5 185648172 185648421 -17437111 + MIR SINE MIR 3 262 0 1699 159 48 15 chr5 185648940 185649273 -17436259 - MER2 DNA MER2_type 0 344 1 306 259 62 0 chr5 185651390 185651471 -17434061 - MIR SINE MIR -3 259 174 1411 169 0 115 chr5 185651476 185651814 -17433718 + AluSx SINE Alu 1 299 -3 225 245 51 82 chr5 185651997 185652095 -17433437 - MIR SINE MIR -165 97 3 2077 115 7 3 chr5 185652420 185652715 -17432817 - AluY SINE Alu -15 296 1 210 37 0 0 chr5 185652782 185652809 -17432723 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 205 389 29 36 chr5 185653397 185653536 -17431996 + L2 LINE L2 3079 3216 -56 1228 215 102 0 chr5 185653862 185654118 -17431414 - AluJb SINE Alu -30 282 1 226 260 178 30 chr5 185654310 185654479 -17431053 + L2 LINE L2 3079 3272 0 221 281 0 0 chr5 185655742 185655799 -17429733 + (TA)n Simple_repeat Simple_repeat 2 58 0 189 318 32 0 chr5 185655889 185655907 -17429625 + L2 LINE L2 3249 3265 -48 2368 82 0 0 chr5 185655907 185656201 -17429331 - AluY SINE Alu -17 294 1 189 318 32 0 chr5 185656201 185656245 -17429287 + L2 LINE L2 3265 3313 0 3385 201 14 43 chr5 185656330 185657163 -17428369 - L1MB5 LINE L1 0 6174 5366 344 356 132 19 chr5 185657274 185657850 -17427682 + L2 LINE L2 2435 3070 -243 1474 238 31 22 chr5 185659799 185660244 -17425288 - L1MC4a LINE L1 -1 7807 7359 24 53 0 0 chr5 185660305 185660343 -17425189 + AT_rich Low_complexity Low_complexity 1 38 0 1570 198 76 38 chr5 185660399 185660870 -17424662 - L1MB8 LINE L1 -2 6176 5688 339 136 0 0 chr5 185660894 185660953 -17424579 - L1MB4 LINE L1 0 6180 6122 24 67 0 0 chr5 185660988 185661033 -17424499 + AT_rich Low_complexity Low_complexity 1 45 0 1108 190 20 0 chr5 185661033 185661228 -17424304 - MER2 DNA MER2_type -146 199 1 2388 203 42 6 chr5 185661228 185661751 -17423781 - L1MB3 LINE L1 -60 6359 5818 6791 172 159 101 chr5 185661753 185661800 -17423732 - L1MB3 LINE L1 -3817 2565 2522 2405 81 0 7 chr5 185661800 185662108 -17423424 - AluY SINE Alu -5 306 1 6791 172 159 101 chr5 185662108 185662810 -17422722 - L1MB3 LINE L1 -3860 2522 1863 842 82 7 30 chr5 185662810 185662945 -17422587 + AluYb8 SINE Alu 1 132 -186 6791 172 159 101 chr5 185662945 185664469 -17421063 - L1MB3 LINE L1 -4519 1863 20 2458 254 68 52 chr5 185664531 185665066 -17420466 - L1MC4a LINE L1 -748 5398 5854 2224 110 3 0 chr5 185665066 185665367 -17420165 - AluY SINE Alu -9 302 1 2458 254 68 52 chr5 185665367 185666300 -17419232 - L1MC4a LINE L1 -291 5855 4939 2083 121 0 0 chr5 185666448 185666728 -17418804 + AluSc SINE Alu 1 280 -29 541 68 0 14 chr5 185667039 185667138 -17418394 - AluY SINE Alu 0 312 215 2204 63 0 46 chr5 185667239 185667524 -17418008 - AluY SINE Alu -37 274 3 285 255 29 41 chr5 185667541 185667689 -17417843 - L1MC4a LINE L1 -1601 4545 4396 381 264 81 78 chr5 185667859 185668401 -17417131 - L1MC4a LINE L1 -2008 4138 3595 353 260 139 17 chr5 185668722 185668895 -17416637 - L1MC4a LINE L1 -2868 3278 3085 29944 118 15 59 chr5 185669217 185675650 -17409882 - L1PA7 LINE L1 -3 6151 12 343 309 144 18 chr5 185675698 185675976 -17409556 - L1MC4a LINE L1 -3131 3015 2703 614 156 0 0 chr5 185676091 185676200 -17409332 - L1P LINE L1 -2171 3975 3867 331 113 0 0 chr5 185676203 185676256 -17409276 + L1 LINE L1 4796 4848 -1298 6033 155 26 28 chr5 185676257 185677442 -17408090 - L1P LINE L1 -2107 4039 2857 * 7879 144 32 5 chr5 185677437 185679257 -17406275 + L1PA11 LINE L1 3932 5791 -383 231 98 0 0 chr5 185679277 185679318 -17406214 - LTR66 LTR ERVL -172 438 398 210 143 0 0 chr5 185679318 185679353 -17406179 + (TA)n Simple_repeat Simple_repeat 2 36 0 2620 89 37 8 chr5 185679357 185679739 -17405793 + L1PA11 LINE L1 5782 6174 0 28 48 0 0 chr5 185680655 185680697 -17404835 + AT_rich Low_complexity Low_complexity 1 42 0 848 64 0 0 chr5 185681138 185681248 -17404284 + L1PA5 LINE L1 6045 6154 0 24 0 0 0 chr5 185681731 185681755 -17403777 + AT_rich Low_complexity Low_complexity 1 24 0 1813 176 58 21 chr5 185682540 185682629 -17402903 + MLT1B LTR MaLR 1 85 -305 2104 138 0 0 chr5 185682629 185682925 -17402607 + AluSp SINE Alu 1 296 -17 1813 176 58 21 chr5 185682925 185683211 -17402321 + MLT1B LTR MaLR 85 390 0 32 26 0 0 chr5 185684736 185684775 -17400757 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 185684995 185685025 -17400507 + AT_rich Low_complexity Low_complexity 1 30 0 457 213 11 11 chr5 185685119 185685213 -17400319 + FLAM_A SINE Alu 1 94 -48 * 749 193 0 21 chr5 185685205 185685350 -17400182 - AluJo SINE Alu -168 144 3 333 258 37 110 chr5 185685391 185685554 -17399978 - Charlie8 DNA MER1_type -2266 151 1 330 87 0 0 chr5 185685617 185685663 -17399869 + (TG)n Simple_repeat Simple_repeat 2 47 0 461 284 14 27 chr5 185685982 185686130 -17399402 - MIR SINE MIR -28 234 89 2123 110 0 52 chr5 185686223 185686550 -17398982 - AluSp SINE Alu -3 310 1 2243 164 45 10 chr5 185686812 185687208 -17398324 + MSTB LTR MaLR 17 426 0 1308 225 38 88 chr5 185687754 185688207 -17397325 - MLT1E1 LTR MaLR -1 653 224 249 281 11 45 chr5 185688203 185688292 -17397240 - MLT1E1 LTR MaLR -568 86 1 * 25 65 0 0 chr5 185688482 185688528 -17397004 + AT_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr5 185688898 185688932 -17396600 + AT_rich Low_complexity Low_complexity 1 34 0 232 132 38 0 chr5 185689629 185689682 -17395850 + (TATAA)n Simple_repeat Simple_repeat 3 57 0 36 62 0 0 chr5 185691450 185691514 -17394018 + AT_rich Low_complexity Low_complexity 1 64 0 468 259 167 25 chr5 185692259 185692421 -17393111 - MIR SINE MIR -61 201 17 665 298 23 9 chr5 185692819 185693037 -17392495 + MIR SINE MIR 14 234 -28 197 277 120 17 chr5 185694371 185694470 -17391062 - MIR SINE MIR -91 118 16 1485 194 0 70 chr5 185694664 185694979 -17390553 - AluJo SINE Alu -14 298 6 227 186 0 23 chr5 185695868 185695911 -17389621 + CT-rich Low_complexity Low_complexity 4 45 0 2247 107 0 3 chr5 185695936 185696234 -17389298 + AluSc SINE Alu 1 297 -12 192 40 0 0 chr5 185696382 185696407 -17389125 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 21 71 0 0 chr5 185697936 185697978 -17387554 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 185699684 185699707 -17385825 + AT_rich Low_complexity Low_complexity 1 23 0 535 234 178 37 chr5 185700351 185700472 -17385060 + MIR SINE MIR 19 122 -140 1891 154 43 27 chr5 185700472 185700841 -17384691 - THE1C LTR MaLR 0 375 1 535 234 178 37 chr5 185700841 185700933 -17384599 + MIR SINE MIR 122 262 0 226 339 126 33 chr5 185701188 185701371 -17384161 - L2 LINE L2 -349 2965 2766 967 296 56 30 chr5 185701378 185701810 -17383722 - LTR16A LTR ERVL -7 443 1 207 370 0 12 chr5 185701852 185701933 -17383599 - L2 LINE L2 -4 3268 3189 1892 146 7 3 chr5 185702022 185702310 -17383222 + AluSq SINE Alu 1 289 -24 216 0 0 0 chr5 185702313 185702337 -17383195 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 390 274 73 37 chr5 185702640 185702804 -17382728 - MIR3 SINE MIR -10 198 29 429 348 100 0 chr5 185703583 185703793 -17381739 - MIR SINE MIR 0 262 32 354 306 36 9 chr5 185706568 185706679 -17378853 + MIR SINE MIR 7 120 -142 1832 31 0 0 chr5 185706680 185706902 -17378630 + L1PA4 LINE L1 5934 6155 0 220 304 18 0 chr5 185707860 185707916 -17377616 + MIR SINE MIR 204 260 -2 545 241 98 29 chr5 185708276 185708450 -17377082 + MIR SINE MIR 77 262 0 1985 85 21 92 chr5 185709439 185709767 -17375765 + AluYb8 SINE Alu 3 307 -11 235 198 0 25 chr5 185710996 185711077 -17374455 + (CATATA)n Simple_repeat Simple_repeat 5 83 0 338 261 41 49 chr5 185711516 185711635 -17373897 - L1ME LINE L1 -4531 1549 1461 1960 147 3 3 chr5 185711635 185711935 -17373597 - AluSx SINE Alu -9 303 4 338 261 41 49 chr5 185711935 185712058 -17373474 - L1ME LINE L1 -4619 1461 1339 516 161 0 11 chr5 185712075 185712162 -17373370 + Tigger2a DNA MER2_type 1 86 -348 309 213 65 65 chr5 185712264 185712372 -17373160 - L1ME LINE L1 -4929 1332 1225 1033 299 98 42 chr5 185712415 185712541 -17372991 - L1ME LINE L1 -4968 1088 970 2038 117 3 3 chr5 185712541 185712871 -17372661 - AluSx SINE Alu 0 330 1 1033 299 98 42 chr5 185712871 185713798 -17371734 - L1ME LINE L1 -5086 970 4 291 132 0 0 chr5 185713828 185713881 -17371651 - L1MA6 LINE L1 0 6300 6248 * 8989 183 37 84 chr5 185713878 185716621 -17368911 - L1 LINE L1 -1309 5899 3286 1013 230 0 31 chr5 185716694 185716920 -17368612 - AluJo SINE Alu -32 280 62 5550 242 75 47 chr5 185716921 185719015 -17366517 - L1 LINE L1 -3956 3253 426 442 295 69 18 chr5 185720197 185720414 -17365118 - MIR SINE MIR 0 262 35 186 43 0 0 chr5 185720636 185720659 -17364873 + (T)n Simple_repeat Simple_repeat 1 23 0 29 28 0 0 chr5 185721926 185721962 -17363570 + AT_rich Low_complexity Low_complexity 1 36 0 570 294 38 16 chr5 185724241 185724425 -17361107 + MIR SINE MIR 13 200 -62 250 263 12 0 chr5 185724428 185724508 -17361024 + (TA)n Simple_repeat Simple_repeat 2 82 0 1516 178 20 27 chr5 185724687 185724980 -17360552 - AluJb SINE Alu -5 307 17 861 244 85 0 chr5 185725341 185725542 -17359990 + MER58A DNA MER1_type 7 224 0 1628 102 3 109 chr5 185728329 185728622 -17356910 - AluSx SINE Alu -2 310 49 443 239 74 62 chr5 185728692 185728868 -17356664 + MIR SINE MIR 54 231 -31 2543 65 0 0 chr5 185729087 185729394 -17356138 + AluY SINE Alu 1 307 -4 267 367 45 30 chr5 185729394 185729593 -17355939 + L2 LINE L2 2415 2616 -698 239 314 271 8 chr5 185730257 185730375 -17355157 + MIR3 SINE MIR 37 185 -23 1070 175 13 0 chr5 185730957 185731474 -17354058 + ALR/Alpha Satellite centromeric 1 523 -13 1055 166 10 0 chr5 185731487 185732150 -17353382 + ALR/Alpha Satellite centromeric 1 669 -13 1038 172 10 0 chr5 185732163 185732825 -17352707 + ALR/Alpha Satellite centromeric 1 668 -13 1122 162 5 0 chr5 185732838 185734185 -17351347 + ALR/Alpha Satellite centromeric 1 1354 -13 1013 170 12 0 chr5 185734198 185734860 -17350672 + ALR/Alpha Satellite centromeric 1 669 -13 1124 168 8 0 chr5 185734873 185736895 -17348637 + ALR/Alpha Satellite centromeric 1 2037 -13 1009 173 12 0 chr5 185736908 185737570 -17347962 + ALR/Alpha Satellite centromeric 1 669 -13 1122 158 5 0 chr5 185737583 185738930 -17346602 + ALR/Alpha Satellite centromeric 1 1354 -13 1013 173 12 0 chr5 185738943 185739605 -17345927 + ALR/Alpha Satellite centromeric 1 669 -13 1136 166 5 0 chr5 185739618 185740965 -17344567 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 185740978 185741640 -17343892 + ALR/Alpha Satellite centromeric 1 669 -13 1068 157 5 0 chr5 185741653 185743000 -17342532 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 10 0 chr5 185743013 185743675 -17341857 + ALR/Alpha Satellite centromeric 1 668 -13 1068 156 5 0 chr5 185743688 185745035 -17340497 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 185745048 185745710 -17339822 + ALR/Alpha Satellite centromeric 1 669 -13 1068 156 5 0 chr5 185745723 185747070 -17338462 + ALR/Alpha Satellite centromeric 1 1354 -13 932 173 10 0 chr5 185747083 185747745 -17337787 + ALR/Alpha Satellite centromeric 1 668 -13 1068 159 5 0 chr5 185747758 185749105 -17336427 + ALR/Alpha Satellite centromeric 1 1354 -13 957 171 12 0 chr5 185749118 185749780 -17335752 + ALR/Alpha Satellite centromeric 1 669 -13 1048 161 5 0 chr5 185749793 185751140 -17334392 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 12 0 chr5 185751153 185751815 -17333717 + ALR/Alpha Satellite centromeric 1 669 -13 1066 157 5 0 chr5 185751828 185753175 -17332357 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 185753188 185753850 -17331682 + ALR/Alpha Satellite centromeric 1 669 -13 1068 158 5 0 chr5 185753863 185755210 -17330322 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 10 0 chr5 185755223 185755885 -17329647 + ALR/Alpha Satellite centromeric 1 668 -13 1066 154 5 0 chr5 185755898 185757294 -17328238 + ALR/Alpha Satellite centromeric 1 1403 -13 955 171 12 0 chr5 185757307 185757969 -17327563 + ALR/Alpha Satellite centromeric 1 669 -13 1055 160 6 0 chr5 185757982 185759328 -17326204 + ALR/Alpha Satellite centromeric 1 1353 -13 957 167 10 0 chr5 185759341 185759668 -17325864 + ALR/Alpha Satellite centromeric 1 330 -11 906 175 12 0 chr5 185759679 185760003 -17325529 + ALR/Alpha Satellite centromeric 1 327 -13 1066 159 5 0 chr5 185760016 185761363 -17324169 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 12 0 chr5 185761376 185762038 -17323494 + ALR/Alpha Satellite centromeric 1 669 -13 1068 159 7 0 chr5 185762051 185763056 -17322476 + ALR/Alpha Satellite centromeric 1 1011 -13 957 173 12 0 chr5 185763069 185763731 -17321801 + ALR/Alpha Satellite centromeric 1 669 -13 1092 163 5 0 chr5 185763744 185765091 -17320441 + ALR/Alpha Satellite centromeric 1 1354 -13 1037 163 7 0 chr5 185765104 185766109 -17319423 + ALR/Alpha Satellite centromeric 1 1011 -13 957 173 10 0 chr5 185766122 185766784 -17318748 + ALR/Alpha Satellite centromeric 1 668 -13 1068 165 5 0 chr5 185766797 185768144 -17317388 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 12 0 chr5 185768157 185768819 -17316713 + ALR/Alpha Satellite centromeric 1 669 -13 1068 158 5 0 chr5 185768832 185770179 -17315353 + ALR/Alpha Satellite centromeric 1 1354 -13 955 171 12 0 chr5 185770192 185770854 -17314678 + ALR/Alpha Satellite centromeric 1 669 -13 1066 161 5 0 chr5 185770867 185772214 -17313318 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 10 0 chr5 185772227 185772889 -17312643 + ALR/Alpha Satellite centromeric 1 668 -13 1068 162 5 0 chr5 185772902 185774249 -17311283 + ALR/Alpha Satellite centromeric 1 1354 -13 957 170 12 0 chr5 185774262 185774924 -17310608 + ALR/Alpha Satellite centromeric 1 669 -13 957 172 12 0 chr5 185774937 185775599 -17309933 + ALR/Alpha Satellite centromeric 1 669 -13 1066 158 5 0 chr5 185775612 185776959 -17308573 + ALR/Alpha Satellite centromeric 1 1354 -13 957 172 12 0 chr5 185776972 185777634 -17307898 + ALR/Alpha Satellite centromeric 1 669 -13 1090 159 5 0 chr5 185777647 185778994 -17306538 + ALR/Alpha Satellite centromeric 1 1354 -13 957 173 12 0 chr5 185779007 185779669 -17305863 + ALR/Alpha Satellite centromeric 1 669 -13 1066 157 5 0 chr5 185779682 185781029 -17304503 + ALR/Alpha Satellite centromeric 1 1354 -13 955 173 12 2 chr5 185781042 185781704 -17303828 + ALR/Alpha Satellite centromeric 1 668 -13 920 175 10 0 chr5 185781717 185782379 -17303153 + ALR/Alpha Satellite centromeric 1 668 -13 1052 167 8 0 chr5 185782392 185784413 -17301119 + ALR/Alpha Satellite centromeric 1 2036 -13 1080 157 5 0 chr5 185784426 185785773 -17299759 + ALR/Alpha Satellite centromeric 1 1354 -13 957 174 12 0 chr5 185785786 185786448 -17299084 + ALR/Alpha Satellite centromeric 1 669 -13 1068 165 6 0 chr5 185786461 185788148 -17297384 + ALR/Alpha Satellite centromeric 1 1697 -11 906 177 12 0 chr5 185788159 185788483 -17297049 + ALR/Alpha Satellite centromeric 1 327 -13 1084 158 5 0 chr5 185788496 185789843 -17295689 + ALR/Alpha Satellite centromeric 1 1354 -13 941 178 10 0 chr5 185789856 185790518 -17295014 + ALR/Alpha Satellite centromeric 1 668 -13 1068 158 5 0 chr5 185790531 185791878 -17293654 + ALR/Alpha Satellite centromeric 1 1354 -13 932 173 12 0 chr5 185791891 185792553 -17292979 + ALR/Alpha Satellite centromeric 1 669 -13 1068 161 5 0 chr5 185792566 185793913 -17291619 + ALR/Alpha Satellite centromeric 1 1354 -13 1001 167 10 0 chr5 185793926 185794589 -17290943 + ALR/Alpha Satellite centromeric 1 669 -13 1068 162 7 0 chr5 185794602 185795607 -17289925 + ALR/Alpha Satellite centromeric 1 1011 -13 935 171 12 0 chr5 185795620 185796282 -17289250 + ALR/Alpha Satellite centromeric 1 669 -13 1068 165 5 0 chr5 185796295 185798322 -17287210 + ALR/Alpha Satellite centromeric 1 2037 -13 955 170 12 0 chr5 185798335 185798997 -17286535 + ALR/Alpha Satellite centromeric 1 669 -13 1068 156 4 0 chr5 185799010 185800118 -17285414 + ALR/Alpha Satellite centromeric 1 1112 0 488 254 58 36 chr5 185850262 185850400 -17235132 - MIR SINE MIR 0 262 122 2271 89 10 3 chr5 185850733 185851037 -17234495 - AluY SINE Alu -5 306 1 388 290 27 32 chr5 185852339 185852525 -17233007 - L2 LINE L2 -2229 1085 901 1951 156 3 19 chr5 185853353 185853661 -17231871 + AluSx SINE Alu 1 303 -9 28 29 0 0 chr5 185853785 185853820 -17231712 + AT_rich Low_complexity Low_complexity 1 35 0 2213 191 47 6 chr5 185855667 185856139 -17229393 - L1MB3 LINE L1 -111 6308 5818 6791 172 159 101 chr5 185856141 185856188 -17229344 - L1MB3 LINE L1 -3817 2565 2522 2405 81 0 7 chr5 185856188 185856496 -17229036 - AluY SINE Alu -5 306 1 6791 172 159 101 chr5 185856496 185857198 -17228334 - L1MB3 LINE L1 -3860 2522 1863 842 82 7 30 chr5 185857198 185857333 -17228199 + AluYb8 SINE Alu 1 132 -186 6791 172 159 101 chr5 185857333 185858857 -17226675 - L1MB3 LINE L1 -4519 1863 20 2458 254 68 52 chr5 185858919 185859454 -17226078 - L1MC4a LINE L1 -748 5398 5854 2247 113 0 0 chr5 185859454 185859756 -17225776 - AluY SINE Alu -9 302 1 2458 254 68 52 chr5 185859756 185860689 -17224843 - L1MC4a LINE L1 -291 5855 4939 2083 121 0 0 chr5 185860837 185861117 -17224415 + AluSc SINE Alu 1 280 -29 2301 64 0 44 chr5 185861427 185861749 -17223783 - AluY SINE Alu 0 311 3 285 303 30 0 chr5 185861766 185861898 -17223634 - L1MC4a LINE L1 -1601 4545 4410 404 265 79 77 chr5 185862084 185862627 -17222905 - L1MC4a LINE L1 -2008 4138 3595 353 260 139 17 chr5 185862948 185863121 -17222411 - L1MC4a LINE L1 -2868 3278 3085 15774 96 20 3 chr5 185863443 185866553 -17218979 - L1PA7 LINE L1 -3 6151 2999 16217 139 11 104 chr5 185866706 185870347 -17215185 - L1P LINE L1 -2831 3315 12 343 309 144 18 chr5 185870395 185870673 -17214859 - L1MC4a LINE L1 -3131 3015 2703 614 156 0 0 chr5 185870788 185870897 -17214635 - L1P LINE L1 -2171 3975 3867 331 113 0 0 chr5 185870900 185870953 -17214579 + L1 LINE L1 4796 4848 -1298 6033 155 26 28 chr5 185870954 185872139 -17213393 - L1P LINE L1 -2107 4039 2857 * 7879 144 32 5 chr5 185872134 185873954 -17211578 + L1PA11 LINE L1 3932 5791 -383 341 131 16 0 chr5 185873996 185874057 -17211475 + (TA)n Simple_repeat Simple_repeat 1 62 0 2602 87 39 8 chr5 185874061 185874442 -17211090 + L1PA11 LINE L1 5782 6174 0 28 48 0 0 chr5 185875358 185875400 -17210132 + AT_rich Low_complexity Low_complexity 1 42 0 848 64 0 0 chr5 185875841 185875951 -17209581 + L1PA5 LINE L1 6045 6154 0 24 0 0 0 chr5 185876434 185876458 -17209074 + AT_rich Low_complexity Low_complexity 1 24 0 1847 170 58 24 chr5 185877243 185877332 -17208200 + MLT1B LTR MaLR 1 85 -305 2104 138 0 0 chr5 185877332 185877628 -17207904 + AluSp SINE Alu 1 296 -17 1847 170 58 24 chr5 185877628 185877915 -17207617 + MLT1B LTR MaLR 85 390 0 32 26 0 0 chr5 185879439 185879478 -17206054 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr5 185879698 185879728 -17205804 + AT_rich Low_complexity Low_complexity 1 30 0 457 213 11 11 chr5 185879822 185879916 -17205616 + FLAM_A SINE Alu 1 94 -48 * 749 193 0 21 chr5 185879908 185880053 -17205479 - AluJo SINE Alu -168 144 3 333 258 37 110 chr5 185880093 185880256 -17205276 - Charlie8 DNA MER1_type -2266 151 1 330 87 0 0 chr5 185880319 185880365 -17205167 + (TG)n Simple_repeat Simple_repeat 2 47 0 461 284 14 27 chr5 185880684 185880832 -17204700 - MIR SINE MIR -28 234 89 290 173 0 53 chr5 185880929 185881004 -17204528 - AluSp/q SINE Alu -2 301 231 1029 143 31 6 chr5 185881116 185881277 -17204255 - AluJb SINE Alu -131 181 17 861 244 85 0 chr5 185881641 185881842 -17203690 + MER58A DNA MER1_type 7 224 0 1608 97 7 107 chr5 185884650 185884940 -17200592 - AluSx SINE Alu -3 309 49 443 239 74 62 chr5 185885010 185885186 -17200346 + MIR SINE MIR 54 231 -31 2521 68 0 0 chr5 185885405 185885713 -17199819 + AluY SINE Alu 1 308 -3 267 367 45 30 chr5 185885713 185885912 -17199620 + L2 LINE L2 2415 2616 -698 239 314 271 8 chr5 185886576 185886694 -17198838 + MIR3 SINE MIR 37 185 -23 376 257 62 18 chr5 185887129 185887242 -17198290 - MIR SINE MIR -73 189 72 500 172 255 0 chr5 185887251 185887408 -17198124 - ORSL DNA AcHobo 0 275 79 2381 74 0 16 chr5 185889162 185889471 -17196061 - AluY SINE Alu -7 304 1 1615 146 15 98 chr5 185889524 185889686 -17195846 - AluSx SINE Alu -11 301 178 2382 72 3 7 chr5 185889686 185889991 -17195541 - AluY SINE Alu -3 308 5 1615 146 15 98 chr5 185889991 185890156 -17195376 - AluSx SINE Alu -134 178 1 1308 185 77 57 chr5 185892334 185892685 -17192847 - MLT1C LTR MaLR -8 459 102 364 323 101 52 chr5 185893407 185893655 -17191877 + MIR SINE MIR 3 262 0 1698 159 48 15 chr5 185894174 185894507 -17191025 - MER2 DNA MER2_type 0 344 1 306 259 62 0 chr5 185896624 185896705 -17188827 - MIR SINE MIR -3 259 174 1411 169 0 115 chr5 185896710 185897048 -17188484 + AluSx SINE Alu 1 299 -3 225 245 51 82 chr5 185897231 185897329 -17188203 - MIR SINE MIR -165 97 3 2077 115 7 3 chr5 185897654 185897949 -17187583 - AluY SINE Alu -15 296 1 210 37 0 0 chr5 185898016 185898043 -17187489 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 205 389 29 36 chr5 185898631 185898770 -17186762 + L2 LINE L2 3079 3216 -56 1228 215 102 0 chr5 185899096 185899352 -17186180 - AluJb SINE Alu -30 282 1 226 260 178 30 chr5 185899544 185899713 -17185819 + L2 LINE L2 3079 3272 0 221 281 0 0 chr5 185900976 185901033 -17184499 + (TA)n Simple_repeat Simple_repeat 1 57 0 189 318 32 0 chr5 185901123 185901141 -17184391 + L2 LINE L2 3249 3265 -48 2368 82 0 0 chr5 185901141 185901435 -17184097 - AluY SINE Alu -17 294 1 189 318 32 0 chr5 185901435 185901479 -17184053 + L2 LINE L2 3265 3313 0 3385 201 14 43 chr5 185901564 185902397 -17183135 - L1MB5 LINE L1 0 6174 5366 344 356 132 19 chr5 185902508 185903084 -17182448 + L2 LINE L2 2435 3070 -243 1474 238 31 22 chr5 185905033 185905478 -17180054 - L1MC4a LINE L1 -1 7807 7359 24 53 0 0 chr5 185905539 185905577 -17179955 + AT_rich Low_complexity Low_complexity 1 38 0 1570 198 76 38 chr5 185905633 185906104 -17179428 - L1MB8 LINE L1 -2 6176 5688 339 136 0 0 chr5 185906128 185906187 -17179345 - L1MB4 LINE L1 0 6180 6122 24 67 0 0 chr5 185906222 185906267 -17179265 + AT_rich Low_complexity Low_complexity 1 45 0 1098 181 21 0 chr5 185906267 185906455 -17179077 - MER2 DNA MER2_type -146 199 8 1148 147 21 0 chr5 185906562 185906752 -17178780 - AluSp SINE Alu -119 194 1 2243 164 45 10 chr5 185907012 185907408 -17178124 + MSTB LTR MaLR 17 426 0 1308 225 38 88 chr5 185907954 185908407 -17177125 - MLT1E1 LTR MaLR -1 653 224 249 281 11 45 chr5 185908403 185908492 -17177040 - MLT1E1 LTR MaLR -568 86 1 * 25 65 0 0 chr5 185908682 185908728 -17176804 + AT_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr5 185909097 185909131 -17176401 + AT_rich Low_complexity Low_complexity 1 34 0 232 132 38 0 chr5 185909827 185909880 -17175652 + (TATAA)n Simple_repeat Simple_repeat 3 57 0 36 62 0 0 chr5 185911648 185911712 -17173820 + AT_rich Low_complexity Low_complexity 1 64 0 468 259 167 25 chr5 185912458 185912620 -17172912 - MIR SINE MIR -61 201 17 665 298 23 9 chr5 185913017 185913235 -17172297 + MIR SINE MIR 14 234 -28 197 277 120 17 chr5 185914569 185914668 -17170864 - MIR SINE MIR -91 118 16 1485 194 0 70 chr5 185914862 185915177 -17170355 - AluJo SINE Alu -14 298 6 227 186 0 23 chr5 185916066 185916109 -17169423 + CT-rich Low_complexity Low_complexity 4 45 0 2262 104 0 3 chr5 185916134 185916432 -17169100 + AluSc SINE Alu 1 297 -12 192 40 0 0 chr5 185916580 185916605 -17168927 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 21 71 0 0 chr5 185918134 185918176 -17167356 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr5 185919882 185919905 -17165627 + AT_rich Low_complexity Low_complexity 1 23 0 535 234 178 37 chr5 185920549 185920670 -17164862 + MIR SINE MIR 19 122 -140 1891 154 43 27 chr5 185920670 185921039 -17164493 - THE1C LTR MaLR 0 375 1 535 234 178 37 chr5 185921039 185921131 -17164401 + MIR SINE MIR 122 262 0 226 339 126 33 chr5 185921386 185921569 -17163963 - L2 LINE L2 -349 2965 2766 967 296 56 30 chr5 185921576 185922008 -17163524 - LTR16A LTR ERVL -7 443 1 207 370 0 12 chr5 185922050 185922131 -17163401 - L2 LINE L2 -4 3268 3189 1879 142 7 7 chr5 185922220 185922509 -17163023 + AluSq SINE Alu 1 289 -24 216 0 0 0 chr5 185922512 185922536 -17162996 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 390 274 73 37 chr5 185922839 185923003 -17162529 - MIR3 SINE MIR -10 198 29 429 348 100 0 chr5 185923782 185923992 -17161540 - MIR SINE MIR 0 262 32 354 306 36 9 chr5 185926767 185926878 -17158654 + MIR SINE MIR 7 120 -142 1832 31 0 0 chr5 185926879 185927101 -17158431 + L1PA4 LINE L1 5934 6155 0 220 304 18 0 chr5 185928054 185928110 -17157422 + MIR SINE MIR 204 260 -2 545 241 98 29 chr5 185928470 185928644 -17156888 + MIR SINE MIR 77 262 0 1985 85 21 92 chr5 185929633 185929961 -17155571 + AluYb8 SINE Alu 3 307 -11 227 200 0 15 chr5 185931206 185931271 -17154261 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 1046 300 95 46 chr5 185931710 185931829 -17153703 - L1ME LINE L1 -4633 1628 1516 1960 147 3 3 chr5 185931829 185932129 -17153403 - AluSx SINE Alu -9 303 4 1046 300 95 46 chr5 185932129 185932269 -17153263 - L1ME LINE L1 -4745 1516 1384 1844 168 71 43 chr5 185932269 185932691 -17152841 + Tigger2a DNA MER2_type 1 434 0 1046 300 95 46 chr5 185932691 185932999 -17152533 - L1ME LINE L1 -4877 1384 1092 2038 117 3 3 chr5 185932999 185933329 -17152203 - AluSx SINE Alu 0 330 1 1046 300 95 46 chr5 185933329 185934255 -17151277 - L1ME LINE L1 -5169 1092 4 291 132 0 0 chr5 185934285 185934338 -17151194 - L1MA6 LINE L1 0 6300 6248 * 7995 173 35 132 chr5 185934335 185937229 -17148303 - L1 LINE L1 -1309 5899 3286 1013 230 0 31 chr5 185937302 185937528 -17148004 - AluJo SINE Alu -32 280 62 5577 242 75 47 chr5 185937529 185939623 -17145909 - L1 LINE L1 -3956 3253 426 442 295 69 18 chr5 185940805 185941022 -17144510 - MIR SINE MIR 0 262 35 186 43 0 0 chr5 185941244 185941267 -17144265 + (T)n Simple_repeat Simple_repeat 1 23 0 29 28 0 0 chr5 185942534 185942570 -17142962 + AT_rich Low_complexity Low_complexity 1 36 0 180 152 0 0 chr5 185943819 185943852 -17141680 + (TATG)n Simple_repeat Simple_repeat 3 35 0 * 233 130 0 0 chr5 185943831 185943877 -17141655 + LTR66 LTR ERVL 394 439 -171 * 378 268 18 27 chr5 185943855 185943967 -17141565 + L1MC4 LINE L1 6614 6724 -1318 210 325 44 35 chr5 185943990 185944104 -17141428 + L2 LINE L2 3142 3256 -16 202 154 26 0 chr5 185944207 185944246 -17141286 + (TA)n Simple_repeat Simple_repeat 1 40 0 361 324 157 22 chr5 185944346 185944531 -17141001 - MIR SINE MIR -1 261 52 312 297 159 47 chr5 185945624 185945920 -17139612 - L2 LINE L2 -16 3297 2969 2167 96 6 25 chr5 185946020 185946334 -17139198 - AluSc SINE Alu -1 308 1 982 303 83 29 chr5 185947557 185948142 -17137390 - L2 LINE L2 0 3313 2696 672 275 64 38 chr5 185948383 185948725 -17136807 - L1MC4a LINE L1 -1924 5884 5534 240 275 0 46 chr5 185948770 185948879 -17136653 - L1MC4a LINE L1 -777 5397 5294 1353 289 171 46 chr5 185949009 185949126 -17136406 - L2 LINE L2 -605 2709 2608 2261 68 3 3 chr5 185949126 185949420 -17136112 + AluY SINE Alu 1 294 -17 1353 289 171 46 chr5 185949420 185950088 -17135444 - L2 LINE L2 -706 2608 1826 420 241 70 32 chr5 185950090 185950248 -17135284 - L2 LINE L2 -1626 1688 1525 1227 339 42 17 chr5 185950252 185950830 -17134702 - L2 LINE L2 -2109 1205 614 297 0 0 0 chr5 185952057 185952090 -17133442 + (CA)n Simple_repeat Simple_repeat 2 34 0 297 0 0 0 chr5 185952089 185952122 -17133410 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 32 0 0 chr5 185952658 185952689 -17132843 + AT_rich Low_complexity Low_complexity 1 31 0 1468 246 50 11 chr5 185953832 185954296 -17131236 + L1MB3 LINE L1 4650 5131 -1015 1825 153 83 57 chr5 185954321 185954708 -17130824 + MSTA LTR MaLR 5 401 -27 1298 176 153 0 chr5 185954709 185955006 -17130526 - AluJb SINE Alu 0 337 1 835 121 0 28 chr5 185955032 185955173 -17130359 - AluSg/x SINE Alu -8 302 166 4486 162 65 7 chr5 185955183 185956072 -17129460 + L1MA8 LINE L1 5332 6272 -19 835 207 56 0 chr5 185956236 185956541 -17128991 + L1MB3 LINE L1 5764 6180 -3 225 97 0 113 chr5 185956663 185956725 -17128807 - L1MC4 LINE L1 -1335 6707 6653 247 230 14 14 chr5 185956972 185957046 -17128486 + L1ME LINE L1 5743 5816 -350 24 32 0 0 chr5 185957134 185957165 -17128367 + AT_rich Low_complexity Low_complexity 1 31 0 194 62 31 0 chr5 185957187 185957219 -17128313 + (TA)n Simple_repeat Simple_repeat 1 33 0 2857 3 0 0 chr5 185957484 185957795 -17127737 + AluYa5 SINE Alu 1 311 0 26 64 0 0 chr5 185959053 185959100 -17126432 + AT_rich Low_complexity Low_complexity 1 47 0 2277 52 10 3 chr5 185959380 185959669 -17125863 - AluY SINE Alu -20 291 1 187 282 10 48 chr5 185959691 185959794 -17125738 + L3 LINE CR1 1356 1454 -123 222 128 0 0 chr5 185960972 185961011 -17124521 + (A)n Simple_repeat Simple_repeat 1 39 0 27 29 0 0 chr5 185962251 185962285 -17123247 + AT_rich Low_complexity Low_complexity 1 34 0 592 297 31 5 chr5 185963100 185963295 -17122237 - MIR SINE MIR 0 262 63 220 370 101 40 chr5 185965001 185965279 -17120253 - L2 LINE L2 -4 3268 2974 340 0 80 0 chr5 185965657 185965707 -17119825 + T-rich Low_complexity Low_complexity 2 55 0 1897 124 3 3 chr5 185965723 185966005 -17119527 - AluSx SINE Alu -30 282 1 249 83 0 0 chr5 185971337 185971373 -17114159 + (T)n Simple_repeat Simple_repeat 1 36 0 2525 48 0 16 chr5 185972506 185972822 -17112710 + AluY SINE Alu 1 311 0 1878 135 3 10 chr5 185972830 185973127 -17112405 + AluSx SINE Alu 1 295 -17 243 0 0 0 chr5 185974134 185974161 -17111371 + (T)n Simple_repeat Simple_repeat 1 27 0 2006 140 10 0 chr5 185974516 185974809 -17110723 - AluSx SINE Alu -16 296 1 222 37 0 0 chr5 185974860 185974887 -17110645 + (T)n Simple_repeat Simple_repeat 1 27 0 261 232 92 128 chr5 185975004 185975168 -17110364 + L2 LINE L2 3156 3313 0 387 330 63 18 chr5 185975376 185975701 -17109831 - L1ME LINE L1 -508 5654 5314 21 0 0 0 chr5 185975744 185975765 -17109767 + AT_rich Low_complexity Low_complexity 1 21 0 258 290 56 81 chr5 185975791 185976150 -17109382 - L1ME LINE L1 -912 5234 4885 1030 287 106 57 chr5 185976362 185976902 -17108630 - MLT1E2 LTR MaLR 0 654 60 292 279 55 6 chr5 185976966 185977131 -17108401 - L1ME LINE L1 -1493 4653 4481 * 11790 203 47 32 chr5 185977121 185978047 -17107485 - L1MA4 LINE L1 0 6482 5571 195 69 0 0 chr5 185978047 185978076 -17107456 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1958 113 0 31 chr5 185978078 185978370 -17107162 - AluSq SINE Alu -30 283 1 11790 203 47 32 chr5 185978370 185981838 -17103694 - L1MA4 LINE L1 -911 5571 1968 1423 199 32 35 chr5 185981838 185982149 -17103383 + AluJo SINE Alu 3 312 0 11790 203 47 32 chr5 185982149 185984146 -17101386 - L1MA4 LINE L1 -4514 1968 1 1715 253 89 74 chr5 185984522 185985237 -17100295 - MER21B LTR ERV1 -129 734 9 331 185 19 0 chr5 185985239 185985293 -17100239 + Tigger5 DNA MER2_type 1 55 -2268 414 207 23 0 chr5 185985300 185985387 -17100145 + Tigger5 DNA MER2_type 2234 2322 -1 248 77 26 0 chr5 185985404 185985443 -17100089 + (TG)n Simple_repeat Simple_repeat 1 40 0 1492 181 37 12 chr5 185985446 185985767 -17099765 - L1MB2 LINE L1 -24 6147 5819 420 332 113 3 chr5 185985799 185986154 -17099378 - L1ME LINE L1 -2146 4000 3607 9462 184 70 31 chr5 185986217 185986415 -17099117 + L1MB3 LINE L1 2 191 -6193 2165 110 3 13 chr5 185986415 185986724 -17098808 - AluSq SINE Alu -7 306 1 9462 184 70 31 chr5 185986724 185988793 -17096739 + L1MB3 LINE L1 191 2359 -4025 2022 226 25 33 chr5 185988784 185988888 -17096644 + L1MB3 LINE L1 4598 4701 -1681 * 1604 162 8 0 chr5 185988888 185989147 -17096385 + AluSx SINE Alu 48 308 -4 2022 226 25 33 chr5 185989147 185989612 -17095920 + L1MB3 LINE L1 4701 5162 -1220 622 240 7 0 chr5 185989994 185990144 -17095388 + L1MB3 LINE L1 5125 5275 -1107 3329 190 76 11 chr5 185990245 185991035 -17094497 + L1MB3 LINE L1 5566 6406 -13 370 298 87 17 chr5 185991354 185991870 -17093662 - L1ME LINE L1 -2925 3221 2670 1887 130 38 38 chr5 185992459 185992828 -17092704 + L1MA9 LINE L1 5791 6159 -153 416 130 39 0 chr5 185992875 185992952 -17092580 + L1MA9 LINE L1 6163 6242 -70 25 0 0 0 chr5 185993043 185993068 -17092464 + AT_rich Low_complexity Low_complexity 1 25 0 1304 224 0 53 chr5 185993068 185993367 -17092165 - AluJo SINE Alu -19 283 1 781 214 124 7 chr5 185993463 185993753 -17091779 + MER33 DNA MER1_type 1 324 0 2990 184 64 0 chr5 185994211 185994866 -17090666 - L1M1 LINE L1 -6681 884 16 366 238 53 127 chr5 185994898 185995142 -17090390 + L2 LINE L2 3081 3306 -7 208 0 0 0 chr5 185995375 185995398 -17090134 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1825 153 0 3 chr5 185995398 185995680 -17089852 - AluSx SINE Alu -31 281 1 23 78 0 0 chr5 185995750 185995801 -17089731 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr5 185996298 185996336 -17089196 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 185996510 185996539 -17088993 + AT_rich Low_complexity Low_complexity 1 29 0 269 323 51 78 chr5 185996548 185996765 -17088767 + MIR SINE MIR 52 262 0 21 0 0 0 chr5 185997198 185997219 -17088313 + AT_rich Low_complexity Low_complexity 1 21 0 446 315 34 7 chr5 185998285 185998431 -17087101 + MIR SINE MIR 8 157 -105 514 261 161 11 chr5 185998643 185998823 -17086709 + MIR SINE MIR 5 211 -51 2156 114 0 0 chr5 185998826 185999124 -17086408 + AluY SINE Alu 1 298 -13 2277 80 0 13 chr5 185999220 185999534 -17085998 + AluY SINE Alu 1 310 -1 180 0 0 0 chr5 186000429 186000449 -17085083 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2338 83 0 0 chr5 186000453 186000753 -17084779 - AluSc SINE Alu -6 303 4 244 0 0 53 chr5 186000979 186001017 -17084515 + (CA)n Simple_repeat Simple_repeat 2 37 0 1870 104 0 11 chr5 186001205 186001474 -17084058 + AluY SINE Alu 41 306 -5 22 0 0 0 chr5 186002610 186002632 -17082900 + AT_rich Low_complexity Low_complexity 1 22 0 1326 197 4 0 chr5 186002756 186002990 -17082542 - AluJo SINE Alu -77 235 1 191 250 132 40 chr5 186003223 186003299 -17082233 + L3 LINE CR1 1377 1459 -118 191 329 26 13 chr5 186003450 186003526 -17082006 - L2 LINE L2 -3 3310 3234 840 167 47 0 chr5 186003582 186003732 -17081800 + AluJb SINE Alu 156 312 0 680 214 156 25 chr5 186003732 186004097 -17081435 - MER69 DNA AcHobo -29 2497 2085 1827 280 34 32 chr5 186004154 186004719 -17080813 - MER69 DNA AcHobo -1960 566 1 22 70 0 0 chr5 186004757 186004800 -17080732 + AT_rich Low_complexity Low_complexity 1 43 0 507 319 56 59 chr5 186004847 186005307 -17080225 - L2 LINE L2 -191 3081 2617 1509 168 7 41 chr5 186006965 186007256 -17078276 - L1MB7 LINE L1 -434 5678 5398 1737 185 55 2 chr5 186007256 186007648 -17077884 + L1MB7 LINE L1 5679 6099 -19 459 284 20 39 chr5 186008839 186009043 -17076489 - L1M4 LINE L1 -1119 4961 4762 28 0 0 0 chr5 186009161 186009189 -17076343 + AT_rich Low_complexity Low_complexity 1 28 0 238 189 57 0 chr5 186009197 186009250 -17076282 - L1M4 LINE L1 -1400 4680 4625 8983 218 62 49 chr5 186009259 186012162 -17073370 - L1MB3 LINE L1 -3 6416 3554 2037 146 10 0 chr5 186012162 186012471 -17073061 - AluSx SINE Alu 0 312 1 8983 218 62 49 chr5 186012471 186014509 -17071023 - L1MB3 LINE L1 -2865 3554 1376 687 44 11 0 chr5 186014509 186014599 -17070933 - L1PA3 LINE L1 -3 6152 6062 8983 218 62 49 chr5 186014599 186015979 -17069553 - L1MB3 LINE L1 -5043 1376 16 464 225 166 0 chr5 186016019 186016188 -17069344 - L1M4 LINE L1 -1495 4585 4389 1627 271 127 37 chr5 186016192 186017731 -17067801 - L1ME LINE L1 -2439 3641 2001 1560 201 3 13 chr5 186017940 186018253 -17067279 - AluJb SINE Alu 0 312 3 1348 294 89 36 chr5 186018313 186019836 -17065696 - L1ME LINE L1 -4586 1675 46 228 359 69 35 chr5 186020398 186020543 -17064989 - L2 LINE L2 -456 2858 2709 24 32 0 0 chr5 186021121 186021152 -17064380 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 186021887 186021909 -17063623 + AT_rich Low_complexity Low_complexity 1 22 0 458 312 6 13 chr5 186022446 186022603 -17062929 + MIR SINE MIR 59 214 -48 243 0 0 0 chr5 186023331 186023358 -17062174 + (A)n Simple_repeat Simple_repeat 1 27 0 260 270 34 34 chr5 186023437 186023526 -17062006 + MIR SINE MIR 153 241 -21 1131 288 107 54 chr5 186023916 186024729 -17060803 - L2 LINE L2 0 3313 2391 2756 153 47 13 chr5 186024754 186025304 -17060228 + L1 LINE L1 4152 4720 -1426 753 241 47 5 chr5 186025311 186025502 -17060030 - L2 LINE L2 -979 2335 2137 1221 277 106 40 chr5 186025699 186026255 -17059277 - MLT1E LTR MaLR 0 593 1 1579 183 39 7 chr5 186026280 186026559 -17058973 + AluJo SINE Alu 3 290 -22 23 54 0 0 chr5 186026559 186026596 -17058936 + AT_rich Low_complexity Low_complexity 1 37 0 6213 88 35 0 chr5 186028046 186029179 -17056353 - L1PA10 LINE L1 -2 6166 5024 1801 146 4 0 chr5 186030237 186030505 -17055027 - AluSx SINE Alu -15 297 29 244 420 42 0 chr5 186031561 186031680 -17053852 + L2 LINE L2 3143 3266 -6 243 216 48 80 chr5 186033420 186033545 -17051987 + MIR SINE MIR 51 171 -91 2327 75 7 0 chr5 186033572 186033877 -17051655 + AluY SINE Alu 1 307 -4 200 257 64 55 chr5 186033946 186034055 -17051477 - L2 LINE L2 -55 3258 3149 185 353 96 6 chr5 186034534 186034690 -17050842 - L2 LINE L2 -556 2758 2589 418 329 68 24 chr5 186035221 186035470 -17050062 - MIR SINE MIR 0 262 3 218 297 0 50 chr5 186035556 186035657 -17049875 + T-rich Low_complexity Low_complexity 4 99 0 293 368 55 15 chr5 186036994 186037195 -17048337 + L2 LINE L2 2901 3109 -204 266 263 305 0 chr5 186039857 186039952 -17045580 - L2 LINE L2 -7 3306 3183 442 356 35 17 chr5 186041985 186042215 -17043317 - MIR SINE MIR -27 235 2 2157 113 0 32 chr5 186042239 186042549 -17042983 - AluSc SINE Alu -7 302 3 317 307 170 39 chr5 186042768 186043051 -17042481 + MLT1K LTR MaLR 158 477 -111 301 220 100 47 chr5 186043587 186043737 -17041795 - MIR SINE MIR -13 249 92 25 0 0 0 chr5 186045255 186045280 -17040252 + AT_rich Low_complexity Low_complexity 1 25 0 848 263 42 18 chr5 186045328 186045613 -17039919 - MLT1I LTR MaLR -25 384 93 1512 213 113 124 chr5 186045681 186046503 -17039029 + LTR1B LTR ERV1 1 813 -13 1303 243 62 85 chr5 186046558 186047167 -17038365 + MLT1E3 LTR MaLR 8 620 -4 399 285 58 22 chr5 186047177 186047314 -17038218 + MIR SINE MIR 65 206 -56 363 310 103 10 chr5 186047471 186047680 -17037852 + MIR SINE MIR 19 246 -16 22 0 0 0 chr5 186047713 186047735 -17037797 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 186049302 186049328 -17036204 + AT_rich Low_complexity Low_complexity 1 26 0 339 261 80 71 chr5 186049551 186049777 -17035755 - L1ME4a LINE L1 -3 6118 5891 215 184 71 10 chr5 186049777 186049875 -17035657 + (TA)n Simple_repeat Simple_repeat 1 104 0 625 281 35 12 chr5 186050772 186050822 -17034710 + MER5B DNA MER1_type 1 48 -130 225 0 0 0 chr5 186050822 186050847 -17034685 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 625 281 35 12 chr5 186050847 186050967 -17034565 + MER5B DNA MER1_type 48 175 -3 394 315 134 9 chr5 186051743 186051975 -17033557 + L2 LINE L2 2707 2967 -347 777 247 29 0 chr5 186051985 186052159 -17033373 + MER20 DNA MER1_type 40 218 -1 284 350 24 8 chr5 186052217 186052340 -17033192 + L2 LINE L2 3012 3136 -177 386 207 37 0 chr5 186052498 186052580 -17032952 - MIR SINE MIR -112 150 66 2213 101 0 3 chr5 186053367 186053653 -17031879 + AluSx SINE Alu 3 287 -25 29 0 0 0 chr5 186053653 186053682 -17031850 + AT_rich Low_complexity Low_complexity 1 29 0 584 297 67 21 chr5 186053826 186054065 -17031467 + MIR SINE MIR 1 250 -12 216 97 0 0 chr5 186054340 186054371 -17031161 + (T)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr5 186054692 186054715 -17030817 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 186055964 186055996 -17029536 + AT_rich Low_complexity Low_complexity 1 32 0 1420 127 52 0 chr5 186056047 186056299 -17029233 + L1MA5 LINE L1 6034 6298 -2 796 303 26 21 chr5 186056562 186056902 -17028630 + L1MC4a LINE L1 5585 5926 -1882 592 366 12 12 chr5 186056997 186057243 -17028289 - MIR SINE MIR 0 262 17 288 0 0 0 chr5 186058099 186058131 -17027401 + (TG)n Simple_repeat Simple_repeat 2 33 0 1207 245 63 57 chr5 186058563 186059020 -17026512 + MLT2C2 LTR ERVL 5 464 0 691 299 97 36 chr5 186059938 186060350 -17025182 + MLT1J2 LTR MaLR 1 437 -13 218 346 55 24 chr5 186061120 186061247 -17024285 + L3b LINE CR1 1155 1285 -298 222 283 0 0 chr5 186061413 186061474 -17024058 - MIR3 SINE MIR -48 160 99 2114 282 89 45 chr5 186062175 186062478 -17023054 - L2 LINE L2 -160 3153 2865 550 112 0 11 chr5 186062478 186062567 -17022965 + L1MA4A LINE L1 6207 6294 -9 2114 282 89 45 chr5 186062567 186062761 -17022771 - L2 LINE L2 -448 2865 2681 2186 114 3 0 chr5 186062761 186063058 -17022474 + AluSp SINE Alu 1 298 -15 2114 282 89 45 chr5 186063058 186063633 -17021899 - L2 LINE L2 -632 2681 2015 557 326 89 41 chr5 186064408 186064990 -17020542 - L1M4 LINE L1 -2847 3299 2690 2172 293 74 44 chr5 186065069 186066490 -17019042 - L2 LINE L2 -15 3298 1827 5318 76 1 3 chr5 186066566 186067274 -17018258 - L1PA7 LINE L1 -1 6153 5447 2655 75 14 0 chr5 186067274 186067657 -17017875 + L1M LINE L1 5032 5419 -743 219 274 60 12 chr5 186067666 186067750 -17017782 - L2 LINE L2 -1700 1614 1527 24 0 0 0 chr5 186068819 186068843 -17016689 + AT_rich Low_complexity Low_complexity 1 24 0 2374 82 7 0 chr5 186068927 186069230 -17016302 + AluY SINE Alu 1 305 -6 488 254 58 36 chr5 186069563 186069701 -17015831 + MIR SINE MIR 122 262 0 250 62 0 0 chr5 186071806 186071838 -17013694 - HERVK3 LTR ERVK -7025 218 187 2332 125 6 12 chr5 186072070 186072414 -17013118 - LTR3b LTR ERVK 0 500 159 2354 86 0 3 chr5 186072483 186072787 -17012745 + AluY SINE Alu 1 303 -8 183 42 0 0 chr5 186073191 186073215 -17012317 + (T)n Simple_repeat Simple_repeat 1 24 0 915 201 30 0 chr5 186073583 186073782 -17011750 + L1MA9 LINE L1 5908 6112 -200 183 311 214 0 chr5 186075198 186075301 -17010231 - L2 LINE L2 -3 3269 3145 2571 169 7 13 chr5 186075690 186076152 -17009380 + MLT2C2 LTR ERVL 4 462 -2 807 265 36 42 chr5 186076183 186076489 -17009043 - LTR16A1 LTR ERVL -8 449 146 192 333 36 36 chr5 186076837 186076921 -17008611 - L2 LINE L2 -31 3241 3158 355 294 64 0 chr5 186076977 186077086 -17008446 + MIR SINE MIR 117 232 -30 304 336 23 39 chr5 186077111 186077239 -17008293 + L2 LINE L2 3184 3309 -4 417 221 93 29 chr5 186077922 186078062 -17007470 - L1ME3 LINE L1 -75 6087 5939 2710 171 25 33 chr5 186078708 186079562 -17005970 + MER21B-int LTR ERV1 3232 4136 -55 4316 179 53 9 chr5 186079650 186080453 -17005079 + MER21B LTR ERV1 3 841 -22 2507 62 7 3 chr5 186081682 186081990 -17003542 - AluSp SINE Alu -4 309 1 244 364 0 0 chr5 186084460 186084548 -17000984 + MIR SINE MIR 18 105 -103 280 192 48 10 chr5 186085000 186085104 -17000428 + (TA)n Simple_repeat Simple_repeat 2 109 0 439 304 34 53 chr5 186086075 186086282 -16999250 + MIR SINE MIR 49 251 -11 2225 102 3 7 chr5 186086853 186087157 -16998375 + AluSq SINE Alu 1 303 -10 813 276 14 18 chr5 186087193 186087414 -16998118 + MER58A DNA MER1_type 5 224 0 2885 125 106 8 chr5 186087581 186088061 -16997471 + MER1A DNA MER1_type 1 527 0 306 266 102 0 chr5 186088162 186088290 -16997242 - MLT1J2 LTR MaLR -242 208 68 334 301 116 46 chr5 186088378 186088717 -16996815 - L2 LINE L2 -219 3053 2692 2257 115 0 0 chr5 186088724 186089029 -16996503 - AluSg SINE Alu -5 305 1 350 335 67 16 chr5 186090559 186090753 -16994779 - MIR SINE MIR -18 244 41 185 381 41 0 chr5 186091265 186091362 -16994170 - MIR SINE MIR -109 153 53 306 106 0 0 chr5 186091383 186091430 -16994102 + (TG)n Simple_repeat Simple_repeat 2 48 0 390 307 92 80 chr5 186091460 186091959 -16993573 + L3 LINE CR1 876 1380 -197 366 23 0 0 chr5 186092779 186092822 -16992710 + (TG)n Simple_repeat Simple_repeat 2 44 0 415 235 0 92 chr5 186093412 186093565 -16991967 - L2 LINE L2 0 3313 3175 425 333 103 4 chr5 186094151 186094424 -16991108 - L2 LINE L2 -140 3173 2874 337 191 0 0 chr5 186094471 186094534 -16990998 + L2 LINE L2 2755 2817 -497 628 342 45 4 chr5 186094538 186094804 -16990728 - L2 LINE L2 -621 2693 2417 570 292 249 28 chr5 186096783 186097136 -16988396 - L2 LINE L2 -1 3312 2882 2159 118 0 3 chr5 186097155 186097451 -16988081 + AluSg SINE Alu 1 295 -15 3391 115 6 4 chr5 186097619 186098115 -16987417 - LOR1a LTR ERV1 0 497 1 193 388 48 0 chr5 186098228 186098331 -16987201 - MIR SINE MIR -58 150 43 328 342 86 57 chr5 186099651 186100202 -16985330 - L2 LINE L2 -6 3307 2735 22 0 0 0 chr5 186100767 186100789 -16984743 + AT_rich Low_complexity Low_complexity 1 22 0 2127 107 150 8 chr5 186100964 186101337 -16984195 - MSTA LTR MaLR 0 428 3 438 292 102 33 chr5 186101346 186101544 -16983988 + MIR SINE MIR 6 214 -48 248 268 58 58 chr5 186102365 186102555 -16982977 - L1MC4a LINE L1 -1747 6061 5872 290 260 70 0 chr5 186102580 186102680 -16982852 - L1MC4a LINE L1 -2050 5758 5652 462 319 60 30 chr5 186102793 186103149 -16982383 - L1MC4a LINE L1 -450 5671 5307 1762 116 3 53 chr5 186103254 186103538 -16981994 - AluSx SINE Alu -18 294 25 1845 152 0 33 chr5 186103561 186103864 -16981668 + AluSx SINE Alu 1 293 -19 405 153 0 0 chr5 186103864 186103936 -16981596 + (TA)n Simple_repeat Simple_repeat 1 72 0 562 331 125 38 chr5 186103985 186105205 -16980327 - L1MC4a LINE L1 -1221 4925 3599 2481 4 0 0 chr5 186105205 186105473 -16980059 - AluY SINE Alu 0 311 44 1580 146 4 55 chr5 186105997 186106170 -16979362 - AluSx SINE Alu -13 299 144 1939 120 0 87 chr5 186106170 186106504 -16979028 - AluSx SINE Alu -5 307 3 1580 146 4 55 chr5 186106504 186106605 -16978927 - AluSx SINE Alu -168 144 39 308 274 82 39 chr5 186106696 186106904 -16978628 - L1MC4a LINE L1 -3235 2911 2695 294 288 38 25 chr5 186107022 186107262 -16978270 - L1MC4a LINE L1 -3734 2412 2170 5370 58 10 10 chr5 186107845 186108531 -16977001 + SVA Other Other 701 1386 0 237 65 0 0 chr5 186108851 186108882 -16976650 + (A)n Simple_repeat Simple_repeat 1 31 0 232 254 78 36 chr5 186108915 186109108 -16976424 - HAL1b LINE L1 -966 382 182 495 0 0 0 chr5 186109334 186109389 -16976143 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 307 301 7 65 chr5 186110122 186110275 -16975257 - MLT1J2 LTR MaLR -37 413 270 192 271 0 0 chr5 186110614 186110662 -16974870 + L2 LINE L2 3266 3313 0 1986 200 33 68 chr5 186111203 186111718 -16973814 + MLT1D LTR MaLR 1 497 -8 198 91 0 0 chr5 186112339 186112372 -16973160 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 186114022 186114047 -16971485 + AT_rich Low_complexity Low_complexity 1 25 0 264 336 159 68 chr5 186114155 186114476 -16971056 - L2 LINE L2 -8 3264 2915 666 269 190 46 chr5 186115511 186116038 -16969494 + L2 LINE L2 2709 3310 -3 23 0 0 0 chr5 186116168 186116191 -16969341 + AT_rich Low_complexity Low_complexity 1 23 0 189 280 11 54 chr5 186116208 186116301 -16969231 + MIR SINE MIR 110 198 -64 449 252 13 77 chr5 186116414 186116569 -16968963 - MIR SINE MIR 0 262 118 326 269 57 28 chr5 186118116 186118257 -16967275 + MIR SINE MIR 110 254 -8 6284 60 26 3 chr5 186118312 186119366 -16966166 + L1PA6 LINE L1 5062 6141 -13 26 88 0 0 chr5 186119533 186119601 -16965931 + AT_rich Low_complexity Low_complexity 1 68 0 1153 234 87 96 chr5 186119967 186120510 -16965022 - MLT1F LTR MaLR -2 540 3 1820 99 0 149 chr5 186122663 186123018 -16962514 + AluSx SINE Alu 1 302 0 23 33 0 0 chr5 186123423 186123453 -16962079 + AT_rich Low_complexity Low_complexity 1 30 0 180 205 0 0 chr5 186123693 186123732 -16961800 + L3 LINE CR1 795 833 -744 555 252 6 31 chr5 186124374 186124533 -16960999 + L2 LINE L2 3159 3313 0 2205 105 0 3 chr5 186124702 186124998 -16960534 + AluSg SINE Alu 1 295 -15 1851 132 12 71 chr5 186125030 186125355 -16960177 + AluSx SINE Alu 1 306 -6 258 267 81 0 chr5 186125461 186125547 -16959985 + MIR SINE MIR 167 259 -3 189 248 163 0 chr5 186125852 186125933 -16959599 - MIR SINE MIR -66 142 60 2204 116 7 0 chr5 186126394 186126696 -16958836 - AluSg SINE Alu -6 304 1 304 236 34 34 chr5 186128311 186128400 -16957132 - L1MC4 LINE L1 -1340 6702 6614 473 244 77 36 chr5 186128401 186128569 -16956963 - L1ME3A LINE L1 -12 6158 5984 226 408 0 23 chr5 186128912 186129042 -16956490 + MIR SINE MIR 34 160 -102 231 36 0 0 chr5 186130253 186130281 -16955251 + (A)n Simple_repeat Simple_repeat 1 28 0 1156 135 18 31 chr5 186130438 186130606 -16954926 - L1MA7 LINE L1 -2 6289 6123 2209 128 0 0 chr5 186130606 186130911 -16954621 - AluSc SINE Alu -4 305 1 1156 135 18 31 chr5 186130911 186130971 -16954561 - L1MA7 LINE L1 -168 6123 6064 1402 303 112 33 chr5 186131143 186132145 -16953387 - L2 LINE L2 0 3313 2248 634 58 0 0 chr5 186132145 186132231 -16953301 - AluSg/x SINE Alu -9 303 218 250 317 24 0 chr5 186132242 186132324 -16953208 - L2 LINE L2 -1070 2244 2161 366 216 39 29 chr5 186132813 186132915 -16952617 + MER103 DNA DNA 43 145 -21 421 347 99 0 chr5 186133035 186133248 -16952284 - MIR SINE MIR 0 262 29 668 270 86 0 chr5 186133260 186133434 -16952098 + MER5A DNA MER1_type 1 189 0 306 344 117 7 chr5 186133539 186133693 -16951839 + MER5B DNA MER1_type 5 175 -3 433 299 153 13 chr5 186133734 186133891 -16951641 - MER5A DNA MER1_type -1 188 10 21 36 0 0 chr5 186133942 186133970 -16951562 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 186134683 186134704 -16950828 + AT_rich Low_complexity Low_complexity 1 21 0 2324 108 0 0 chr5 186134705 186135012 -16950520 + AluSx SINE Alu 1 307 -5 280 121 52 17 chr5 186136111 186136169 -16949363 + MLT1C LTR MaLR 408 467 0 29 28 0 0 chr5 186136383 186136419 -16949113 + AT_rich Low_complexity Low_complexity 1 36 0 1096 165 107 45 chr5 186136450 186136674 -16948858 + MER8 DNA MER2_type 2 239 0 2473 154 2 24 chr5 186136704 186137120 -16948412 + MLT2D LTR ERVL 1 407 -7 274 314 72 46 chr5 186137177 186137330 -16948202 - MLT1G1 LTR MaLR -433 162 6 464 263 68 0 chr5 186137572 186137705 -16947827 + MIR SINE MIR 50 191 -71 273 298 129 22 chr5 186137728 186137941 -16947591 - MIR SINE MIR -10 252 22 2131 117 13 0 chr5 186138526 186138826 -16946706 + AluSg SINE Alu 1 304 -6 1013 115 60 16 chr5 186139602 186139784 -16945748 - MER30B DNA MER1_type 0 190 1 834 265 58 51 chr5 186140144 186140752 -16944780 + L1MEd LINE L1 732 1343 -4862 372 318 101 21 chr5 186140803 186141088 -16944444 + L1MEd LINE L1 1438 1741 -4476 382 92 0 92 chr5 186141141 186141217 -16944315 + L1PA10 LINE L1 5911 5979 -195 912 89 0 22 chr5 186141220 186141355 -16944177 + L1PA10 LINE L1 6035 6166 -2 386 322 50 17 chr5 186141582 186141770 -16943762 + L1MEd LINE L1 2186 2339 -3876 188 33 0 33 chr5 186141794 186141824 -16943708 + (CAT)n Simple_repeat Simple_repeat 2 30 0 252 259 0 0 chr5 186142386 186142440 -16943092 + GA-rich Low_complexity Low_complexity 2 55 0 521 281 85 64 chr5 186142650 186143012 -16942520 + L1M4 LINE L1 3929 4306 -1840 641 234 105 83 chr5 186143061 186143123 -16942409 - MLT1C LTR MaLR -2 465 406 2198 105 0 0 chr5 186143123 186143418 -16942114 + AluSq SINE Alu 1 295 -18 641 234 105 83 chr5 186143418 186143815 -16941717 - MLT1C LTR MaLR -61 406 1 306 277 34 8 chr5 186144534 186144653 -16940879 + MLT1L LTR MaLR 490 611 -4 2280 74 0 7 chr5 186144803 186145088 -16940444 + AluSc SINE Alu 3 285 -24 540 145 26 0 chr5 186145091 186145208 -16940324 + (TA)n Simple_repeat Simple_repeat 1 120 0 1976 136 3 17 chr5 186146153 186146454 -16939078 + AluSx SINE Alu 1 297 -15 1917 146 0 3 chr5 186146644 186146931 -16938601 - AluSx SINE Alu -26 286 1 665 82 0 0 chr5 186146934 186147019 -16938513 - AluSq/x SINE Alu -180 133 49 236 304 34 81 chr5 186147281 186147429 -16938103 + MIR SINE MIR 20 160 -102 2298 96 0 0 chr5 186148882 186149175 -16936357 - AluSc SINE Alu -16 293 1 1683 115 4 0 chr5 186149184 186149410 -16936122 - AluSp SINE Alu -70 243 17 393 258 32 118 chr5 186149794 186150073 -16935459 + L2 LINE L2 2096 2350 -964 815 280 65 25 chr5 186150186 186150540 -16934992 - L1ME3A LINE L1 0 6170 5803 1359 133 28 28 chr5 186150574 186150829 -16934703 - Tigger7 DNA MER2_type -4 2487 2233 1141 278 108 44 chr5 186150867 186151921 -16933611 - L1ME3A LINE L1 -391 5771 4596 291 28 0 0 chr5 186151921 186151957 -16933575 + (TC)n Simple_repeat Simple_repeat 1 36 0 1141 278 108 44 chr5 186151957 186152320 -16933212 - L1ME3A LINE L1 -1566 4596 4258 396 0 0 0 chr5 186152408 186152452 -16933080 + (TG)n Simple_repeat Simple_repeat 2 45 0 1926 121 0 50 chr5 186152569 186152891 -16932641 - AluSq SINE Alu 0 307 1 5422 79 31 0 chr5 186152904 186153638 -16931894 - L1PA7 LINE L1 -13 6141 5385 192 97 0 0 chr5 186153645 186153676 -16931856 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7544 26 0 1 chr5 186153677 186155219 -16930313 - L1PA4 LINE L1 -19 6136 4596 13365 38 4 3 chr5 186155219 186156895 -16928637 - L1P LINE L1 -1431 4715 3038 12596 96 23 11 chr5 186156893 186158803 -16926729 - L1PA7 LINE L1 -755 5391 3459 * 26036 132 23 76 chr5 186158907 186164150 -16921382 - L1P LINE L1 -1172 4974 12 238 196 52 72 chr5 186164626 186164723 -16920809 - MLT1C LTR MaLR -256 211 117 471 92 26 0 chr5 186164815 186164891 -16920641 - MADE1 DNA Mariner -2 78 1 30 0 0 0 chr5 186165527 186165557 -16919975 + AT_rich Low_complexity Low_complexity 1 30 0 305 184 0 0 chr5 186165698 186165747 -16919785 + MER57A LTR ERV1 295 343 -60 228 365 21 10 chr5 186166599 186166695 -16918837 - MER5B DNA MER1_type -21 157 61 21 0 0 0 chr5 186166695 186166716 -16918816 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr5 186166796 186166828 -16918704 + (TG)n Simple_repeat Simple_repeat 1 32 0 1927 118 0 14 chr5 186167625 186167904 -16917628 + AluSx SINE Alu 24 298 -14 346 376 56 15 chr5 186168445 186168642 -16916890 + MIR SINE MIR 3 207 -55 236 317 62 54 chr5 186169197 186169421 -16916111 - MLT1K LTR MaLR -347 241 16 211 327 39 29 chr5 186169844 186169948 -16915584 + L2 LINE L2 3201 3305 -8 476 250 89 40 chr5 186171100 186171348 -16914184 - HAL1 LINE L1 -90 2417 2158 1265 272 80 32 chr5 186171351 186171425 -16914107 - HAL1 LINE L1 -421 2086 2017 2068 160 57 0 chr5 186171425 186171794 -16913738 - MLT1B LTR MaLR 0 390 1 1265 272 80 32 chr5 186171794 186172319 -16913213 - HAL1 LINE L1 -490 2017 1458 357 342 47 16 chr5 186172480 186172670 -16912862 - HAL1 LINE L1 -1783 724 529 1841 135 30 7 chr5 186172698 186173002 -16912530 - AluSx SINE Alu -1 311 1 431 176 0 0 chr5 186173017 186173102 -16912430 + L1 LINE L1 5159 5243 -903 1495 114 29 29 chr5 186173102 186173374 -16912158 + L1PB3 LINE L1 5876 6147 -7 7081 212 35 26 chr5 186173413 186176298 -16909234 - L1MB3 LINE L1 -8 6175 3269 32 67 0 0 chr5 186176554 186176614 -16908918 + AT_rich Low_complexity Low_complexity 1 60 0 279 114 0 0 chr5 186176668 186176712 -16908820 - LTR30 LTR ERV1 -123 599 556 2387 256 53 8 chr5 186176728 186177073 -16908459 - L1MB3 LINE L1 -3115 3031 2703 14051 130 34 20 chr5 186177073 186178442 -16907090 + Tigger1 DNA MER2_type 1 1419 -999 2241 93 13 13 chr5 186178442 186178752 -16906780 + AluSg SINE Alu 1 310 0 14051 130 34 20 chr5 186178752 186179766 -16905766 + Tigger1 DNA MER2_type 1419 2417 -1 2387 256 53 8 chr5 186179766 186180245 -16905287 - L1MB3 LINE L1 -3443 2703 2170 1061 202 57 101 chr5 186180253 186180409 -16905123 + MLT1A2 LTR MaLR 5 166 -208 180 0 0 0 chr5 186180409 186180429 -16905103 + (TC)n Simple_repeat Simple_repeat 1 20 0 1061 202 57 101 chr5 186180429 186180659 -16904873 + MLT1A2 LTR MaLR 166 374 0 1695 190 13 49 chr5 186180659 186180797 -16904735 + MLT1A2-int LTR MaLR 1 142 -1593 4469 123 14 1 chr5 186180797 186181485 -16904047 - L1PA15 LINE L1 -4 6161 5465 1695 190 13 49 chr5 186181485 186181731 -16903801 + MLT1A2-int LTR MaLR 142 371 -1364 252 0 0 0 chr5 186183636 186183664 -16901868 + (A)n Simple_repeat Simple_repeat 1 28 0 241 307 75 71 chr5 186183765 186184045 -16901487 + L2 LINE L2 2214 2494 -820 183 335 100 88 chr5 186184242 186184672 -16900860 + L2 LINE L2 2838 3272 0 24 0 0 0 chr5 186185172 186185196 -16900336 + AT_rich Low_complexity Low_complexity 1 24 0 1290 230 50 38 chr5 186185447 186185847 -16899685 + MLT1C LTR MaLR 59 463 -4 2547 61 0 6 chr5 186187547 186187860 -16897672 - AluY SINE Alu 0 311 1 510 272 21 42 chr5 186187907 186188098 -16897434 + Charlie8 DNA MER1_type 129 315 -2102 394 347 157 21 chr5 186188503 186188840 -16896692 + L2 LINE L2 2847 3229 -84 218 347 56 0 chr5 186189229 186189301 -16896231 - MER5C DNA MER1_type -248 76 1 2029 130 22 0 chr5 186189700 186190024 -16895508 - L1PA16 LINE L1 -9 6157 5827 2061 137 0 3 chr5 186191746 186192059 -16893473 + AluSq SINE Alu 1 312 -1 23 54 0 0 chr5 186192581 186192618 -16892914 + AT_rich Low_complexity Low_complexity 1 37 0 414 0 0 0 chr5 186192788 186192834 -16892698 + (TG)n Simple_repeat Simple_repeat 2 47 0 311 0 26 0 chr5 186192992 186193031 -16892501 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 224 330 31 10 chr5 186193334 186193431 -16892101 - L2 LINE L2 -14 3299 3201 332 235 94 68 chr5 186194669 186194941 -16890591 - MER34C LTR ERV1 -8 720 351 240 111 0 0 chr5 186196045 186196081 -16889451 + (TA)n Simple_repeat Simple_repeat 2 37 0 331 261 0 22 chr5 186196081 186196173 -16889359 - L1MC4 LINE L1 -1339 6703 6614 736 236 128 0 chr5 186196227 186196422 -16889110 + MIR SINE MIR 7 226 -36 2223 120 0 0 chr5 186197264 186197563 -16887969 - AluSc SINE Alu -10 299 1 5205 169 34 6 chr5 186197953 186199151 -16886381 - L1PA16 LINE L1 -6 6160 4927 2511 91 0 35 chr5 186199269 186199643 -16885889 - L1PA13 LINE L1 -5 6158 5798 22 0 0 0 chr5 186199751 186199773 -16885759 + AT_rich Low_complexity Low_complexity 1 22 0 1040 198 146 55 chr5 186199951 186200259 -16885273 + MLT1A1 LTR MaLR 1 336 -29 2166 183 98 25 chr5 186200267 186200631 -16884901 - MER34 LTR ERV1 -26 516 107 2283 113 0 0 chr5 186200631 186200941 -16884591 + AluSx SINE Alu 1 310 -2 2166 183 98 25 chr5 186200941 186201057 -16884475 - MER34 LTR ERV1 -435 107 1 204 377 16 49 chr5 186201442 186201625 -16883907 - MIR3 SINE MIR -1 207 31 * 328 331 17 72 chr5 186201606 186201787 -16883745 + L2 LINE L2 3098 3268 -4 735 205 46 55 chr5 186202052 186202348 -16883184 - L1 LINE L1 -3802 3763 3465 369 291 40 47 chr5 186202386 186202534 -16882998 + L2 LINE L2 3167 3313 0 2309 98 0 0 chr5 186202663 186202959 -16882573 + AluSc SINE Alu 3 298 -11 31 58 0 0 chr5 186202974 186203026 -16882506 + AT_rich Low_complexity Low_complexity 1 52 0 226 340 50 10 chr5 186204416 186204516 -16881016 + L2 LINE L2 3159 3262 -10 182 272 98 22 chr5 186204589 186204681 -16880851 + L3 LINE CR1 1297 1395 -182 551 309 40 72 chr5 186204745 186204934 -16880598 - L2 LINE L2 -7 3306 3131 2033 91 84 7 chr5 186204934 186205219 -16880313 + AluSx SINE Alu 1 307 -5 551 309 40 72 chr5 186205219 186205375 -16880157 - L2 LINE L2 -182 3131 2972 190 77 0 0 chr5 186207185 186207211 -16878321 - MIR SINE MIR -122 140 115 2299 102 0 0 chr5 186207283 186207587 -16877945 + AluSg SINE Alu 1 304 -6 213 85 34 51 chr5 186207776 186207835 -16877697 + (TTA)n Simple_repeat Simple_repeat 2 59 0 219 310 0 0 chr5 186208653 186208711 -16876821 + (TATG)n Simple_repeat Simple_repeat 1 58 0 432 332 59 26 chr5 186209385 186209997 -16875535 + L1ME3 LINE L1 5315 5938 -224 2599 153 32 13 chr5 186210283 186210874 -16874658 - MER4E LTR ERV1 0 766 1 346 287 19 19 chr5 186212040 186212148 -16873384 + L2 LINE L2 3188 3295 -18 488 119 0 97 chr5 186212796 186212930 -16872602 - AluSq/x SINE Alu -191 121 1 1450 198 126 14 chr5 186212938 186213296 -16872236 + MER34 LTR ERV1 119 516 -26 1040 198 146 55 chr5 186213304 186213612 -16871920 - MLT1A1 LTR MaLR -29 336 1 22 0 0 0 chr5 186213790 186213812 -16871720 + AT_rich Low_complexity Low_complexity 1 22 0 2511 91 0 35 chr5 186213920 186214294 -16871238 + L1PA13 LINE L1 5798 6158 -5 5205 169 34 6 chr5 186214412 186215610 -16869922 + L1PA16 LINE L1 4927 6160 -6 2223 120 0 0 chr5 186216000 186216299 -16869233 + AluSc SINE Alu 1 299 -10 736 236 128 0 chr5 186217141 186217336 -16868196 - MIR SINE MIR -36 226 7 357 289 0 0 chr5 186217388 186217478 -16868054 + L1MC4 LINE L1 6614 6703 -1339 300 278 10 31 chr5 186217432 186217529 -16868003 - L1MC4 LINE L1 -1339 6703 6609 * 332 235 94 68 chr5 186218616 186218888 -16866644 + MER34C LTR ERV1 351 577 -8 224 330 31 10 chr5 186220128 186220225 -16865307 + L2 LINE L2 3201 3299 -14 311 0 26 0 chr5 186220528 186220567 -16864965 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 396 0 0 0 chr5 186220725 186220769 -16864763 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 54 0 0 chr5 186220939 186220976 -16864556 + AT_rich Low_complexity Low_complexity 1 37 0 2061 137 0 3 chr5 186221498 186221811 -16863721 - AluSq SINE Alu -1 312 1 2029 130 22 0 chr5 186223535 186223859 -16861673 + L1PA16 LINE L1 5827 6157 -9 218 347 56 0 chr5 186224258 186224330 -16861202 + MER5C DNA MER1_type 1 76 -248 394 347 157 21 chr5 186224719 186225056 -16860476 - L2 LINE L2 -84 3229 2847 510 272 21 42 chr5 186225461 186225652 -16859880 - Charlie8 DNA MER1_type -2102 315 129 2294 90 0 10 chr5 186225698 186226010 -16859522 + AluY SINE Alu 1 309 -2 757 128 0 0 chr5 186226017 186226126 -16859406 - MER34 LTR ERV1 -433 109 1 204 377 16 49 chr5 186226511 186226694 -16858838 - MIR3 SINE MIR -1 207 31 * 328 331 17 72 chr5 186226675 186226856 -16858676 + L2 LINE L2 3098 3268 -4 735 205 46 55 chr5 186227121 186227417 -16858115 - L1 LINE L1 -3802 3763 3465 369 291 40 47 chr5 186227455 186227603 -16857929 + L2 LINE L2 3167 3313 0 2309 98 0 0 chr5 186227732 186228028 -16857504 + AluSc SINE Alu 3 298 -11 31 58 0 0 chr5 186228043 186228095 -16857437 + AT_rich Low_complexity Low_complexity 1 52 0 226 340 50 10 chr5 186229486 186229586 -16855946 + L2 LINE L2 3159 3262 -10 182 272 98 22 chr5 186229659 186229751 -16855781 + L3 LINE CR1 1297 1395 -182 551 309 40 72 chr5 186229815 186230004 -16855528 - L2 LINE L2 -7 3306 3131 2033 91 84 7 chr5 186230004 186230289 -16855243 + AluSx SINE Alu 1 307 -5 551 309 40 72 chr5 186230289 186230445 -16855087 - L2 LINE L2 -182 3131 2972 190 77 0 0 chr5 186232254 186232280 -16853252 - MIR SINE MIR -122 140 115 2299 102 0 0 chr5 186232352 186232656 -16852876 + AluSg SINE Alu 1 304 -6 213 85 34 51 chr5 186232845 186232904 -16852628 + (TTA)n Simple_repeat Simple_repeat 2 59 0 219 310 0 0 chr5 186233722 186233780 -16851752 + (TATG)n Simple_repeat Simple_repeat 1 58 0 425 333 59 26 chr5 186234454 186235066 -16850466 + L1ME3 LINE L1 5315 5938 -224 2599 153 32 13 chr5 186235352 186235943 -16849589 - MER4E LTR ERV1 0 766 1 346 287 19 19 chr5 186237110 186237218 -16848314 + L2 LINE L2 3188 3295 -18 466 318 86 33 chr5 186237949 186238308 -16847224 + L2 LINE L2 2051 2428 -886 326 314 21 36 chr5 186238565 186238705 -16846827 - MIR SINE MIR -66 196 59 27 0 0 0 chr5 186238765 186238792 -16846740 + AT_rich Low_complexity Low_complexity 1 27 0 507 207 95 0 chr5 186238810 186238926 -16846606 + MIR SINE MIR 117 243 -19 303 444 18 9 chr5 186238947 186239172 -16846360 - L2 LINE L2 -525 2789 2563 971 291 39 70 chr5 186241029 186241486 -16844046 + LTR67 LTR ERVL 115 557 0 2282 110 0 0 chr5 186241518 186241817 -16843715 - AluSg SINE Alu -11 299 1 333 100 0 0 chr5 186241950 186242000 -16843532 + (TC)n Simple_repeat Simple_repeat 1 50 0 459 0 0 0 chr5 186242000 186242051 -16843481 + (TG)n Simple_repeat Simple_repeat 2 52 0 412 333 114 23 chr5 186242685 186242904 -16842628 + MIR SINE MIR 1 239 -23 329 221 16 81 chr5 186245409 186245560 -16839972 - MLT1H1 LTR MaLR -2 561 418 373 288 4 21 chr5 186245806 186245932 -16839600 - MLT1F LTR MaLR -441 101 3 188 366 0 28 chr5 186246197 186246268 -16839264 + MIR SINE MIR 6 74 -188 420 20 0 0 chr5 186246414 186246463 -16839069 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 445 283 59 7 chr5 186247277 186247429 -16838103 - MLT1J1 LTR MaLR -281 165 6 383 324 68 36 chr5 186247470 186247748 -16837784 - Charlie8 DNA MER1_type -2130 287 1 881 292 73 16 chr5 186247951 186248139 -16837393 + MLT1I LTR MaLR 1 177 -232 231 114 0 0 chr5 186248139 186248174 -16837358 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 881 292 73 16 chr5 186248174 186248369 -16837163 + MLT1I LTR MaLR 177 406 -3 400 323 45 45 chr5 186248432 186248587 -16836945 + MIR3 SINE MIR 23 177 -31 2011 142 0 0 chr5 186248725 186249020 -16836512 - AluSq SINE Alu -13 300 6 2009 123 7 10 chr5 186249925 186250227 -16835305 + AluSx SINE Alu 1 301 -11 286 357 50 25 chr5 186250290 186250573 -16834959 + L2 LINE L2 2470 2759 -555 1617 143 113 55 chr5 186251014 186251343 -16834189 + MER7A DNA MER2_type 1 346 0 1664 157 21 24 chr5 186251349 186251547 -16833985 - MER44D DNA MER2_type -1882 609 412 1833 191 24 0 chr5 186251547 186251883 -16833649 + MER2 DNA MER2_type 1 344 0 1664 157 21 24 chr5 186251883 186252016 -16833516 - MER44D DNA MER2_type -2079 412 9 364 314 132 4 chr5 186252320 186252562 -16832970 + LTR16C LTR ERVL 215 487 -4 1880 189 75 8 chr5 186252623 186253025 -16832507 - MSTB1 LTR MaLR 0 432 4 7166 219 13 19 chr5 186253028 186254684 -16830848 - MSTB1-int LTR MaLR 0 1651 6 2221 173 42 0 chr5 186254690 186255100 -16830432 - MSTB1 LTR MaLR 0 432 6 243 313 55 39 chr5 186256177 186256305 -16829227 - L2 LINE L2 -4 3309 3180 694 244 51 13 chr5 186256343 186256577 -16828955 + MER46C DNA MER2_type 79 321 -17 226 239 250 11 chr5 186256622 186256710 -16828822 + MER91A DNA MER1_type 61 169 -27 312 27 0 0 chr5 186256965 186257002 -16828530 + (GA)n Simple_repeat Simple_repeat 2 38 0 404 324 50 11 chr5 186257027 186257206 -16828326 - MIR SINE MIR -70 192 7 2230 65 0 39 chr5 186257547 186257719 -16827813 - AluY SINE Alu -16 295 139 2744 10 0 0 chr5 186257719 186258019 -16827513 - AluYa5 SINE Alu -11 300 1 2230 65 0 39 chr5 186258019 186258153 -16827379 - AluY SINE Alu -172 139 1 210 71 0 0 chr5 186258494 186258522 -16827010 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 263 105 0 0 chr5 186259183 186259221 -16826311 - LTR67 LTR ERVL -15 542 505 241 130 0 0 chr5 186259814 186259860 -16825672 + L1MA9 LINE L1 6225 6270 -42 1677 218 50 13 chr5 186259860 186260241 -16825291 - MSTD LTR MaLR 0 396 2 30 0 0 0 chr5 186260960 186260990 -16824542 + AT_rich Low_complexity Low_complexity 1 30 0 201 74 0 0 chr5 186261974 186262001 -16823531 + (T)n Simple_repeat Simple_repeat 1 27 0 372 274 155 58 chr5 186263682 186263992 -16821540 + MER102b DNA MER1_type 1 340 -1 1121 289 92 18 chr5 186264756 186265574 -16819958 - L1ME LINE L1 -3038 3042 2165 299 272 100 53 chr5 186265728 186266048 -16819484 - L1ME LINE L1 -5651 419 85 529 309 107 40 chr5 186266372 186266557 -16818975 - L2 LINE L2 -47 3266 3095 2292 109 3 0 chr5 186266557 186266861 -16818671 + AluSg SINE Alu 6 310 0 529 309 107 40 chr5 186266861 186267002 -16818530 - L2 LINE L2 -218 3095 2918 225 361 56 9 chr5 186268101 186268209 -16817323 - L2 LINE L2 -19 3253 3141 189 250 28 42 chr5 186268352 186268424 -16817108 - L2 LINE L2 -151 3162 3092 399 341 10 53 chr5 186269119 186269327 -16816205 - MIR SINE MIR -31 231 33 2621 51 0 0 chr5 186269624 186269935 -16815597 - AluY SINE Alu 0 311 1 1898 131 10 38 chr5 186269935 186270248 -16815284 - AluSx SINE Alu -8 304 1 1016 143 0 50 chr5 186270703 186270864 -16814668 + FRAM SINE Alu 1 153 -23 217 87 22 22 chr5 186270866 186270912 -16814620 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 1948 136 0 29 chr5 186272313 186272623 -16812909 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr5 186273273 186273297 -16812235 + AT_rich Low_complexity Low_complexity 1 24 0 224 250 0 22 chr5 186273563 186273655 -16811877 + GA-rich Low_complexity Low_complexity 3 92 0 1628 140 6 107 chr5 186274593 186274929 -16810603 - AluJo SINE Alu 0 302 1 207 0 0 0 chr5 186275447 186275470 -16810062 + (A)n Simple_repeat Simple_repeat 1 23 0 791 259 135 62 chr5 186275653 186275993 -16809539 + MSTD LTR MaLR 1 396 0 904 224 157 0 chr5 186276247 186276528 -16809004 - MER58B DNA MER1_type -16 325 1 510 252 152 7 chr5 186276731 186276882 -16808650 - MER5A DNA MER1_type -8 181 9 396 125 0 0 chr5 186278392 186278456 -16807076 + (TATG)n Simple_repeat Simple_repeat 2 65 0 189 394 71 0 chr5 186278778 186278877 -16806655 - L2 LINE L2 -68 3204 3099 202 136 0 23 chr5 186279029 186279073 -16806459 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 888 212 57 104 chr5 186279356 186279742 -16805790 - MLT1B LTR MaLR 0 390 23 186 133 0 0 chr5 186280378 186280408 -16805124 + (CA)n Simple_repeat Simple_repeat 1 30 0 235 326 35 35 chr5 186280904 186281045 -16804487 - MER20B DNA MER1_type -607 176 36 298 310 139 29 chr5 186281050 186281324 -16804208 - MLT1K LTR MaLR -29 559 256 180 302 48 0 chr5 186281631 186281694 -16803838 + MIR SINE MIR 77 142 -66 207 337 35 23 chr5 186282378 186282464 -16803068 + MIR3 SINE MIR 13 99 -109 206 274 137 14 chr5 186283078 186283151 -16802381 + MIR3 SINE MIR 127 208 0 303 332 134 26 chr5 186283263 186283686 -16801846 - L2 LINE L2 -84 3229 2761 270 211 18 0 chr5 186284921 186284978 -16800554 + MER63 DNA MER1_type 695 752 -309 237 178 0 0 chr5 186284973 186285018 -16800514 + MER63 DNA MER1_type 974 1018 -42 * 2079 141 7 0 chr5 186285374 186285680 -16799852 - AluJb SINE Alu -4 308 1 263 354 0 10 chr5 186286001 186286100 -16799432 - MLT1J1 LTR MaLR -132 314 217 368 217 12 0 chr5 186286363 186286446 -16799086 - MLT1J2 LTR MaLR -318 132 49 184 309 163 0 chr5 186287519 186287642 -16797890 - MIR SINE MIR -1 261 119 215 284 0 0 chr5 186288287 186288354 -16797178 + GA-rich Low_complexity Low_complexity 3 69 0 2264 103 3 10 chr5 186288381 186288691 -16796841 + AluSx SINE Alu 1 308 -4 226 273 15 0 chr5 186288692 186288758 -16796774 + (TA)n Simple_repeat Simple_repeat 1 67 0 234 0 0 0 chr5 186289368 186289394 -16796138 + (A)n Simple_repeat Simple_repeat 1 26 0 2006 169 72 58 chr5 186289501 186290003 -16795529 - MER67D LTR ERV1 -5 509 1 302 82 41 0 chr5 186290007 186290056 -16795476 + T-rich Low_complexity Low_complexity 3 53 0 249 108 0 0 chr5 186290050 186290087 -16795445 + (TCCCC)n Simple_repeat Simple_repeat 4 40 0 * 661 168 72 8 chr5 186290100 186290225 -16795307 - FLAM_C SINE Alu 0 133 1 212 0 36 0 chr5 186290978 186291006 -16794526 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 229 298 0 0 chr5 186291019 186291076 -16794456 + GA-rich Low_complexity Low_complexity 1 57 0 271 125 0 0 chr5 186291249 186291289 -16794243 + Alu SINE Alu 1 40 -262 2245 111 3 0 chr5 186291289 186291587 -16793945 + AluSx SINE Alu 11 309 -3 216 191 0 0 chr5 186291637 186291679 -16793853 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 614 109 61 0 chr5 186291793 186291915 -16793617 + L1MA7 LINE L1 6157 6290 -1 34 24 0 0 chr5 186291915 186291956 -16793576 + AT_rich Low_complexity Low_complexity 1 41 0 5024 288 125 28 chr5 186293888 186296123 -16789409 + L2 LINE L2 319 2903 -410 2368 100 3 0 chr5 186296123 186296433 -16789099 - AluY SINE Alu 0 311 1 5024 288 125 28 chr5 186296433 186296875 -16788657 + L2 LINE L2 2903 3300 -13 189 0 0 0 chr5 186297087 186297108 -16788424 + (TC)n Simple_repeat Simple_repeat 2 22 0 2096 115 3 3 chr5 186297108 186297396 -16788136 - AluSq SINE Alu -24 289 2 230 241 92 23 chr5 186297468 186297555 -16787977 - MIR3 SINE MIR -11 197 105 411 269 186 12 chr5 186298003 186298170 -16787362 - MIR SINE MIR -6 256 61 189 74 0 0 chr5 186300203 186300230 -16785302 + (TC)n Simple_repeat Simple_repeat 1 27 0 299 226 0 0 chr5 186300765 186300827 -16784705 + MER81 DNA DNA 1 62 -52 * 2017 110 10 157 chr5 186300822 186301331 -16784201 + MER39B LTR ERV1 220 653 0 231 262 33 0 chr5 186301434 186301495 -16784037 + Charlie8 DNA MER1_type 1355 1417 -1000 191 231 0 0 chr5 186301692 186301731 -16783801 + MIR3 SINE MIR 156 194 -14 252 300 70 79 chr5 186302570 186302797 -16782735 - MLT1J LTR MaLR -173 338 114 368 281 62 11 chr5 186303208 186303386 -16782146 + L1MEd LINE L1 636 822 -5297 234 0 0 0 chr5 186303773 186303799 -16781733 + (ATTAG)n Simple_repeat Simple_repeat 5 30 0 185 111 56 0 chr5 186304058 186304094 -16781438 + C-rich Low_complexity Low_complexity 6 43 0 222 118 0 0 chr5 186304573 186304607 -16780925 + (CTA)n Simple_repeat Simple_repeat 3 36 0 232 273 111 50 chr5 186304789 186304888 -16780644 + MIR SINE MIR 35 139 -69 234 273 15 15 chr5 186305042 186305108 -16780424 + MIR3 SINE MIR 92 157 -51 2280 128 0 6 chr5 186305243 186305556 -16779976 + AluSx SINE Alu 1 311 -1 27 29 0 0 chr5 186305609 186305643 -16779889 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr5 186305917 186305949 -16779583 + AT_rich Low_complexity Low_complexity 1 32 0 254 279 48 0 chr5 186306784 186306888 -16778644 + MER103 DNA DNA 11 119 -47 1900 181 65 34 chr5 186307353 186307586 -16777946 - MSTA LTR MaLR 0 428 175 2004 123 7 17 chr5 186307586 186307886 -16777646 - AluSx SINE Alu -12 300 4 1900 181 65 34 chr5 186307886 186308067 -16777465 - MSTA LTR MaLR -253 175 1 7100 181 81 32 chr5 186308073 186308439 -16777093 - MSTB-int LTR MaLR -7 1644 1297 2151 135 0 0 chr5 186308439 186308735 -16776797 + AluSg SINE Alu 1 296 -14 7100 181 81 32 chr5 186308735 186309935 -16775597 - MSTB-int LTR MaLR -354 1297 1 2501 152 10 2 chr5 186309935 186310350 -16775182 - MSTB LTR MaLR 0 426 9 1831 133 13 55 chr5 186311313 186311622 -16773910 - AluSq SINE Alu -17 296 1 2432 91 0 0 chr5 186311707 186312015 -16773517 - AluSg SINE Alu -2 308 1 200 222 0 0 chr5 186312163 186312208 -16773324 + T-rich Low_complexity Low_complexity 1 45 0 193 348 199 12 chr5 186312243 186312404 -16773128 + MIR3 SINE MIR 8 198 -10 2833 3 0 0 chr5 186312843 186313149 -16772383 - AluYa5 SINE Alu -5 306 1 22 0 0 0 chr5 186313576 186313598 -16771934 + AT_rich Low_complexity Low_complexity 1 22 0 335 121 17 0 chr5 186314657 186314715 -16770817 + (TG)n Simple_repeat Simple_repeat 2 60 0 28 0 0 0 chr5 186314790 186314818 -16770714 + AT_rich Low_complexity Low_complexity 1 28 0 2370 50 0 7 chr5 186314818 186315119 -16770413 - L1PA5 LINE L1 -2 6152 5854 26172 82 5 5 chr5 186315119 186318847 -16766685 - L1P LINE L1 -2405 3741 12 21 36 0 0 chr5 186320142 186320170 -16765362 + AT_rich Low_complexity Low_complexity 1 28 0 324 85 0 0 chr5 186320507 186320554 -16764978 - MADE1 DNA Mariner -33 47 1 2076 125 3 31 chr5 186321290 186321611 -16763921 + AluSx SINE Alu 1 312 0 203 288 99 72 chr5 186321942 186322053 -16763479 - MIR3 SINE MIR -28 180 67 250 180 80 0 chr5 186322271 186322321 -16763211 - L2 LINE L2 0 3272 3219 250 149 15 15 chr5 186322465 186322510 -16763022 + (TA)n Simple_repeat Simple_repeat 2 49 -19 12997 155 19 24 chr5 186322510 186322652 -16762880 - Tigger1 DNA MER2_type 0 2418 2277 2404 88 0 3 chr5 186322652 186322958 -16762574 + AluY SINE Alu 7 311 0 12997 155 19 24 chr5 186322958 186325246 -16760286 - Tigger1 DNA MER2_type -141 2277 1 250 149 15 15 chr5 186325246 186325267 -16760265 + (TA)n Simple_repeat Simple_repeat 48 68 0 1050 219 100 61 chr5 186325320 186325782 -16759750 - MLT2B1 LTR ERVL -40 480 1 4994 97 7 1 chr5 186326070 186326754 -16758778 + LTR8 LTR ERV1 4 691 0 188 209 0 15 chr5 186327815 186327882 -16757650 + (TAAA)n Simple_repeat Simple_repeat 3 68 0 180 77 0 0 chr5 186328110 186328136 -16757396 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 23 92 0 0 chr5 186328153 186328218 -16757314 + AT_rich Low_complexity Low_complexity 1 65 0 258 229 8 152 chr5 186329478 186329722 -16755810 - L1MC4 LINE L1 -2 8040 7832 2950 277 69 60 chr5 186329738 186331950 -16753582 - L1MC4a LINE L1 -242 7566 5335 986 240 84 69 chr5 186332055 186332434 -16753098 - MLT1D LTR MaLR -120 385 1 560 295 46 46 chr5 186333230 186333609 -16751923 - L3 LINE CR1 -4 1573 1109 50 42 0 0 chr5 186333803 186333874 -16751658 + AT_rich Low_complexity Low_complexity 1 71 0 335 60 40 0 chr5 186334190 186334240 -16751292 + MADE1 DNA Mariner 28 79 -1 541 301 102 12 chr5 186334749 186335091 -16750441 - L3 LINE CR1 -562 1015 643 385 316 53 37 chr5 186335688 186335875 -16749657 + MLT1K LTR MaLR 53 242 -346 1206 229 16 26 chr5 186336674 186336979 -16748553 - MLT1E LTR MaLR -4 589 288 1446 131 0 0 chr5 186336979 186337177 -16748355 - AluSg/x SINE Alu -3 309 112 276 216 0 0 chr5 186337177 186337228 -16748304 - AluJ/monomer SINE Alu -250 51 1 530 246 13 76 chr5 186337254 186337478 -16748054 - MLT1E LTR MaLR -346 247 38 254 399 81 14 chr5 186338535 186338683 -16746849 - L2 LINE L2 0 3272 3115 1043 273 70 29 chr5 186338978 186339494 -16746038 - MLT1F1 LTR MaLR -14 553 1 420 274 168 10 chr5 186341380 186341577 -16743955 - Charlie8 DNA MER1_type -2136 281 54 1656 202 6 25 chr5 186341579 186341896 -16743636 + AluJb SINE Alu 1 311 -1 2110 276 63 34 chr5 186342290 186343124 -16742408 + L1M2b LINE L1 1 1157 -6052 245 268 31 41 chr5 186343237 186343334 -16742198 + L1MA5 LINE L1 1055 1150 -6416 641 212 32 17 chr5 186343362 186343638 -16741894 - LTR21B LTR ERV1 0 438 118 2379 273 36 42 chr5 186343754 186345048 -16740484 - HERVFH21 LTR ERV1 0 7978 5501 251 297 68 50 chr5 186345249 186345804 -16739728 - HERVFH21 LTR ERV1 -1273 7126 6562 * 360 302 35 30 chr5 186345783 186345985 -16739547 - HERVFH21 LTR ERV1 -1837 5876 5674 587 238 5 45 chr5 186345986 186346255 -16739277 - HERVFH21 LTR ERV1 -435 6448 4969 13637 172 22 19 chr5 186346391 186350533 -16734999 - HERVFH21 LTR ERV1 -1196 5333 1248 1938 198 48 64 chr5 186350526 186351264 -16734268 - HERVFH21 LTR ERV1 -5953 576 41 * 433 111 9 115 chr5 186351248 186351384 -16734148 - HERVFH21 LTR ERV1 -6406 123 1 * 706 238 66 49 chr5 186351384 186351746 -16733786 - LTR21B LTR ERV1 0 438 29 5208 242 20 4 chr5 186351767 186353132 -16732400 + L1MA5 LINE L1 2111 3497 -4069 596 50 12 0 chr5 186353132 186353212 -16732320 + (GAAA)n Simple_repeat Simple_repeat 4 84 0 12215 201 36 28 chr5 186353214 186353999 -16731533 + L1MA5 LINE L1 3460 4237 -3328 2290 103 0 0 chr5 186353999 186354300 -16731232 - AluSc SINE Alu -8 301 1 466 242 92 17 chr5 186354306 186354426 -16731106 - FLAM_C SINE Alu -4 129 1 12215 201 36 28 chr5 186354426 186356732 -16728800 + L1MA5 LINE L1 4241 6580 -985 * 36568 36 29 2 chr5 186356730 186361230 -16724302 - L1PA2 LINE L1 -1503 4643 21 7884 11 1 0 chr5 186361230 186362814 -16722718 + L1PA2 LINE L1 4611 6195 0 6224 134 15 4 chr5 186362817 186363942 -16721590 + L1MA5 LINE L1 6576 7714 -5 275 48 0 24 chr5 186364097 186364139 -16721393 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1108 93 13 0 chr5 186364776 186364926 -16720606 - AluSp/q SINE Alu -8 305 154 645 299 121 48 chr5 186365138 186365332 -16720200 - L2 LINE L2 -1 3312 3134 2246 124 16 26 chr5 186365332 186365711 -16719821 - THE1C LTR MaLR 0 375 1 645 299 121 48 chr5 186365711 186366394 -16719138 - L2 LINE L2 -179 3134 1763 1462 187 33 97 chr5 186366453 186366843 -16718689 - MLT1A1 LTR MaLR 0 365 1 2000 205 35 42 chr5 186366843 186367000 -16718532 + L1MB5 LINE L1 5647 5804 -370 2114 118 10 0 chr5 186367000 186367297 -16718235 - AluSx SINE Alu -10 302 3 2000 205 35 42 chr5 186367297 186367660 -16717872 + L1MB5 LINE L1 5804 6163 -11 376 303 56 17 chr5 186368067 186368298 -16717234 + L1MC4a LINE L1 5656 5895 -1913 194 353 89 58 chr5 186368785 186369009 -16716523 + MIR SINE MIR 19 249 -13 2287 102 3 10 chr5 186369027 186369360 -16716172 - AluSx SINE Alu 0 331 1 2226 105 3 0 chr5 186369427 186369722 -16715810 - AluSq SINE Alu -17 296 1 261 311 139 68 chr5 186371303 186371698 -16713834 - L2 LINE L2 0 3272 2850 24 0 0 0 chr5 186371915 186371939 -16713593 + AT_rich Low_complexity Low_complexity 1 24 0 219 211 0 39 chr5 186371939 186371991 -16713541 + MIR SINE MIR 210 259 -3 540 193 275 0 chr5 186372210 186372381 -16713151 + MER20 DNA MER1_type 1 218 -1 22 56 0 0 chr5 186373110 186373146 -16712386 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr5 186373161 186373184 -16712348 + AT_rich Low_complexity Low_complexity 1 23 0 250 347 21 0 chr5 186373517 186373612 -16711920 + L2 LINE L2 2678 2774 -540 312 240 10 20 chr5 186374184 186374284 -16711248 + (TA)n Simple_repeat Simple_repeat 1 99 0 272 159 44 82 chr5 186374363 186374545 -16710987 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 407 180 58 12 chr5 186374428 186374600 -16710932 + (TA)n Simple_repeat Simple_repeat 1 180 0 26 74 0 0 chr5 186374600 186374654 -16710878 + AT_rich Low_complexity Low_complexity 1 54 0 236 221 50 55 chr5 186374703 186374884 -16710648 + (TA)n Simple_repeat Simple_repeat 1 180 0 774 258 0 5 chr5 186375578 186375768 -16709764 - MER5A DNA MER1_type 0 189 1 586 286 78 46 chr5 186376083 186376300 -16709232 + MIR SINE MIR 9 232 -30 182 315 110 24 chr5 186376386 186376513 -16709019 - MIR3 SINE MIR -30 178 41 218 388 9 56 chr5 186376576 186376712 -16708820 + MIR SINE MIR 20 144 -118 1547 203 3 13 chr5 186376712 186377018 -16708514 + AluJo SINE Alu 1 303 -9 218 388 9 56 chr5 186377018 186377095 -16708437 + MIR SINE MIR 144 223 -39 24 24 0 24 chr5 186377774 186377790 -16707742 + AT_rich Low_complexity Low_complexity 1 16 -25 707 24 0 0 chr5 186377790 186377874 -16707658 + L1PA5 LINE L1 6067 6150 -4 24 24 0 24 chr5 186377874 186377899 -16707633 + AT_rich Low_complexity Low_complexity 16 41 0 235 286 0 0 chr5 186377995 186378058 -16707474 + (TATG)n Simple_repeat Simple_repeat 3 65 0 360 0 0 0 chr5 186379327 186379367 -16706165 + (TG)n Simple_repeat Simple_repeat 1 40 0 309 328 49 8 chr5 186380374 186380496 -16705036 - MIR3 SINE MIR 0 208 82 328 313 35 9 chr5 186380598 186380713 -16704819 - MER5A DNA MER1_type -25 164 47 204 259 71 35 chr5 186381697 186381782 -16703750 - L2 LINE L2 -35 3237 3150 433 278 157 35 chr5 186382472 186382600 -16702932 - MIR SINE MIR 0 262 151 1879 167 0 3 chr5 186382600 186382899 -16702633 + AluJb SINE Alu 1 298 -14 433 278 157 35 chr5 186382899 186383000 -16702532 - MIR SINE MIR -111 151 5 208 143 0 0 chr5 186383534 186383569 -16701963 + (TTTTTG)n Simple_repeat Simple_repeat 5 39 0 2650 234 63 30 chr5 186384453 186385266 -16700266 - L1ME2 LINE L1 -7 6157 5318 768 291 6 13 chr5 186385298 186385614 -16699918 + L1M4 LINE L1 4958 5271 -875 2496 49 3 10 chr5 186385736 186386042 -16699490 + AluY SINE Alu 1 304 -7 337 255 198 45 chr5 186386204 186386361 -16699171 + MER5A DNA MER1_type 9 189 0 346 298 124 25 chr5 186386407 186386568 -16698964 + L2 LINE L2 2239 2415 -899 24 53 0 0 chr5 186386596 186386634 -16698898 + AT_rich Low_complexity Low_complexity 1 38 0 30 45 0 0 chr5 186388787 186388831 -16696701 + AT_rich Low_complexity Low_complexity 1 44 0 223 308 135 65 chr5 186389012 186389272 -16696260 - L2 LINE L2 -4 3309 3032 1305 152 10 39 chr5 186391774 186392183 -16693349 + L1MA9 LINE L1 5783 6312 0 611 238 138 28 chr5 186392436 186392726 -16692806 - LTR52 LTR ERVL -99 322 1 273 218 64 26 chr5 186393153 186393231 -16692301 - L2 LINE L2 -32 3281 3201 2066 92 29 4 chr5 186393234 186393515 -16692017 - AluSg SINE Alu -22 288 1 587 102 23 0 chr5 186395163 186395251 -16690281 - L1PA10 LINE L1 -2 6166 6077 1758 127 0 44 chr5 186396275 186396550 -16688982 - AluSx SINE Alu -35 277 15 198 0 0 0 chr5 186396567 186396589 -16688943 + (T)n Simple_repeat Simple_repeat 1 22 0 536 274 29 95 chr5 186396705 186397052 -16688480 - L1ME3A LINE L1 -68 6102 5779 271 235 48 0 chr5 186397053 186397140 -16688392 + L1ME LINE L1 5749 5836 -330 226 73 49 0 chr5 186397187 186397228 -16688304 + (CATTT)n Simple_repeat Simple_repeat 3 45 0 243 0 0 0 chr5 186397876 186397903 -16687629 + (T)n Simple_repeat Simple_repeat 1 27 0 202 385 60 12 chr5 186398294 186398460 -16687072 - MER5A DNA MER1_type -10 179 6 1093 212 0 69 chr5 186398583 186398828 -16686704 - MER8 DNA MER2_type -11 228 1 22 0 0 0 chr5 186401272 186401294 -16684238 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 186401566 186401601 -16683931 + AT_rich Low_complexity Low_complexity 1 35 0 2060 110 0 7 chr5 186402325 186402617 -16682915 + AluSc SINE Alu 19 308 -1 277 322 17 35 chr5 186403122 186403237 -16682295 - MIR SINE MIR -104 158 46 1308 168 32 5 chr5 186403440 186403688 -16681844 - AluSx SINE Alu 0 310 57 14759 123 20 34 chr5 186404228 186405753 -16679779 + Tigger1 DNA MER2_type 1 1479 -939 881 182 0 29 chr5 186405753 186405923 -16679609 - FRAM SINE Alu -1 165 1 14759 123 20 34 chr5 186405923 186406850 -16678682 + Tigger1 DNA MER2_type 1479 2418 0 241 241 0 0 chr5 186406866 186406924 -16678608 + MER53 DNA DNA 1 58 -131 182 128 26 0 chr5 186409338 186409377 -16676155 + CT-rich Low_complexity Low_complexity 4 43 0 292 364 53 0 chr5 186410342 186410493 -16675039 - MLT1I LTR MaLR -1 408 250 2290 86 26 10 chr5 186410701 186411005 -16674527 + AluSc SINE Alu 1 309 0 306 294 65 54 chr5 186411235 186411419 -16674113 + MIR SINE MIR 13 198 -64 2141 99 0 0 chr5 186411947 186412239 -16673293 + AluY SINE Alu 1 292 -19 28 0 0 0 chr5 186412239 186412267 -16673265 + AT_rich Low_complexity Low_complexity 1 28 0 6493 236 72 58 chr5 186412500 186412838 -16672694 - L1ME LINE L1 -651 5584 5252 330 26 0 0 chr5 186412838 186412877 -16672655 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2015 119 0 4 chr5 186412880 186413158 -16672374 - AluSq SINE Alu -30 283 7 6493 236 72 58 chr5 186413158 186413249 -16672283 - L1ME LINE L1 -984 5251 5163 752 34 0 0 chr5 186413249 186413337 -16672195 - L1PA7 LINE L1 -8 6146 6059 6493 236 72 58 chr5 186413337 186415399 -16670133 - L1ME LINE L1 -1072 5163 2992 1926 150 3 14 chr5 186415399 186415693 -16669839 + AluSx SINE Alu 1 291 -21 6493 236 72 58 chr5 186415693 186416679 -16668853 - L1ME LINE L1 -3243 2992 2021 252 253 30 0 chr5 186417023 186417122 -16668410 + AluJ/FLAM SINE Alu 1 102 -200 398 270 49 0 chr5 186417611 186417774 -16667758 - L1ME LINE L1 -4205 2191 2021 * 713 268 89 15 chr5 186417768 186418093 -16667439 - L1ME LINE L1 -4642 1754 1406 751 196 8 0 chr5 186418118 186418251 -16667281 + AluJo SINE Alu 1 134 -178 567 232 135 38 chr5 186418276 186418595 -16666937 - L1ME LINE L1 -5020 1376 1027 212 238 12 0 chr5 186418602 186418686 -16666846 + (TA)n Simple_repeat Simple_repeat 2 86 0 243 0 0 0 chr5 186418686 186418713 -16666819 + (CA)n Simple_repeat Simple_repeat 2 28 0 1622 215 11 5 chr5 186418714 186419086 -16666446 + L1 LINE L1 3988 4361 -1785 24 32 0 0 chr5 186419098 186419129 -16666403 + AT_rich Low_complexity Low_complexity 1 31 0 287 231 75 22 chr5 186419129 186419263 -16666269 - L1MC/D LINE L1 -2351 5457 5317 201 39 0 0 chr5 186419280 186419306 -16666226 + (TG)n Simple_repeat Simple_repeat 2 27 0 2051 133 7 7 chr5 186419382 186419682 -16665850 - AluSq SINE Alu -12 301 2 197 191 0 48 chr5 186420628 186420670 -16664862 - MIR SINE MIR -116 146 107 2290 62 28 0 chr5 186420775 186420941 -16664591 - AluY SINE Alu -13 298 119 252 0 0 0 chr5 186420941 186420969 -16664563 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 2290 62 28 0 chr5 186420969 186421092 -16664440 - AluY SINE Alu -192 119 1 432 316 65 0 chr5 186421119 186421258 -16664274 + L2 LINE L2 3125 3272 0 295 278 78 0 chr5 186421440 186421530 -16664002 - MLT1H LTR MaLR 0 549 453 216 0 0 0 chr5 186423280 186423304 -16662228 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 279 79 0 0 chr5 186423620 186423658 -16661874 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1160 189 4 48 chr5 186424477 186424508 -16661024 - L1PB4 LINE L1 -7 6149 6118 777 156 0 0 chr5 186424508 186424636 -16660896 - FLAM_C SINE Alu -5 128 1 1160 189 4 48 chr5 186424636 186424853 -16660679 - L1PB4 LINE L1 -38 6118 5912 924 175 12 12 chr5 186424855 186425026 -16660506 + AluJb SINE Alu 137 307 -5 2359 88 3 3 chr5 186425323 186425631 -16659901 - AluSc SINE Alu -1 308 1 297 312 0 0 chr5 186426492 186426569 -16658963 + Charlie8 DNA MER1_type 2341 2417 0 620 226 122 0 chr5 186426702 186426866 -16658666 - MER5A DNA MER1_type 0 189 6 282 325 12 0 chr5 186426985 186427068 -16658464 + L2 LINE L2 3180 3263 -50 2117 136 0 0 chr5 186427086 186427381 -16658151 - AluSg SINE Alu -15 295 1 882 328 159 32 chr5 186428052 186429348 -16656184 + L2 LINE L2 1610 3070 -202 2099 118 7 3 chr5 186429356 186429660 -16655872 - AluSx SINE Alu 0 312 8 234 136 45 0 chr5 186429993 186430037 -16655495 + CT-rich Low_complexity Low_complexity 2 47 0 1407 212 35 59 chr5 186430118 186430346 -16655186 - MSTD LTR MaLR 0 396 181 2289 88 10 0 chr5 186430346 186430640 -16654892 - AluY SINE Alu -14 297 1 1407 212 35 59 chr5 186430640 186430817 -16654715 - MSTD LTR MaLR -215 181 1 216 0 0 0 chr5 186430897 186430921 -16654611 + (T)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr5 186431030 186431057 -16654475 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 492 278 105 5 chr5 186431113 186431304 -16654228 + MIR SINE MIR 53 262 0 202 347 67 13 chr5 186431328 186431403 -16654129 - L2 LINE L2 -49 3264 3186 736 279 39 5 chr5 186431403 186431611 -16653921 + MER58A DNA MER1_type 9 223 -1 268 309 66 50 chr5 186431669 186431850 -16653682 + MIR SINE MIR 33 216 -46 180 0 0 0 chr5 186432799 186432819 -16652713 + (A)n Simple_repeat Simple_repeat 1 20 0 6563 72 7 0 chr5 186433493 186434780 -16650752 - L1PA7 LINE L1 -13 6141 4842 1364 219 26 0 chr5 186434780 186435049 -16650483 - MLT1A1 LTR MaLR -80 285 10 393 283 17 40 chr5 186436170 186436343 -16649189 + Charlie8 DNA MER1_type 108 276 -2141 384 179 0 0 chr5 186436896 186436974 -16648558 + (CA)n Simple_repeat Simple_repeat 2 79 0 1688 237 82 45 chr5 186438719 186438806 -16646726 - L1MEc LINE L1 -3066 3149 3067 1910 153 3 14 chr5 186438806 186439100 -16646432 + AluSx SINE Alu 1 291 -21 1688 237 82 45 chr5 186439100 186439819 -16645713 - L1MEc LINE L1 -3148 3067 2313 395 234 28 83 chr5 186439834 186440086 -16645446 - L1MEc LINE L1 -4138 2258 2021 * 725 268 89 15 chr5 186440080 186440405 -16645127 - L1MEc LINE L1 -4642 1754 1406 751 196 8 0 chr5 186440430 186440563 -16644969 + AluJo SINE Alu 1 134 -178 567 232 135 38 chr5 186440588 186440907 -16644625 - L1MEc LINE L1 -5020 1376 1027 265 229 0 73 chr5 186440915 186441011 -16644521 + L1MC4 LINE L1 6614 6702 -1340 1633 225 88 14 chr5 186446581 186447070 -16638462 + MER63C DNA MER1_type 1 525 -405 884 256 29 0 chr5 186447071 186447278 -16638254 + MER58A DNA MER1_type 2 214 -10 648 242 42 74 chr5 186447288 186447503 -16638029 + MER63C DNA MER1_type 533 740 -190 821 241 88 50 chr5 186447558 186447899 -16637633 + MLT1C LTR MaLR 37 390 -77 729 191 48 6 chr5 186447949 186448117 -16637415 + MER63C DNA MER1_type 756 930 0 2377 81 0 10 chr5 186448600 186448909 -16636623 - AluSc SINE Alu -3 306 1 324 48 0 0 chr5 186450225 186450267 -16635265 + (CA)n Simple_repeat Simple_repeat 1 42 0 357 269 29 0 chr5 186450622 186450726 -16634806 + L1MB7 LINE L1 5636 5742 -422 1099 276 83 19 chr5 186451052 186451627 -16633905 - L1M4 LINE L1 -2170 3976 3365 367 365 0 0 chr5 186451919 186452067 -16633465 + C-rich Low_complexity Low_complexity 1 148 0 26 64 0 0 chr5 186452797 186452844 -16632688 + AT_rich Low_complexity Low_complexity 1 47 0 1483 216 81 0 chr5 186453750 186454121 -16631411 + L1MB7 LINE L1 5773 6173 -11 2497 7 4 4 chr5 186454293 186454604 -16630928 + AluYa5 SINE Alu 1 311 0 3797 145 25 16 chr5 186454827 186455508 -16630024 + L1MB3 LINE L1 5495 6181 -2 274 374 113 18 chr5 186456474 186456696 -16628836 - MIR SINE MIR -16 246 4 298 270 133 42 chr5 186457110 186457349 -16628183 - MLT1L LTR MaLR -158 436 202 1092 224 15 0 chr5 186457631 186457899 -16627633 + L1MA4 LINE L1 6024 6295 -5 1914 155 0 3 chr5 186457903 186458200 -16627332 + AluSx SINE Alu 1 296 -16 412 286 141 21 chr5 186458717 186458909 -16626623 - MIR SINE MIR -8 254 40 195 328 0 0 chr5 186459676 186459734 -16625798 + L2 LINE L2 3208 3265 -7 240 59 0 0 chr5 186461086 186461120 -16624412 + (TG)n Simple_repeat Simple_repeat 2 35 0 191 272 161 12 chr5 186461231 186461312 -16624220 + MIR SINE MIR 60 152 -110 333 332 89 58 chr5 186462744 186463139 -16622393 + L2 LINE L2 2862 3268 -4 188 305 119 17 chr5 186463210 186463328 -16622204 + MIR SINE MIR 10 139 -123 28 0 0 0 chr5 186463666 186463694 -16621838 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr5 186465209 186465242 -16620290 + AT_rich Low_complexity Low_complexity 1 33 0 373 313 35 0 chr5 186465368 186465483 -16620049 - MER94 DNA DNA 0 134 16 2155 131 0 3 chr5 186465752 186466065 -16619467 + AluSx SINE Alu 1 312 0 599 237 148 62 chr5 186466167 186466471 -16619061 + MER102b DNA MER1_type 2 331 -10 2127 117 3 13 chr5 186466705 186467014 -16618518 + AluSx SINE Alu 3 308 -4 21 0 0 0 chr5 186468398 186468419 -16617113 + AT_rich Low_complexity Low_complexity 1 21 0 5420 77 11 10 chr5 186468489 186469398 -16616134 + L1PA8 LINE L1 5082 5991 -181 1930 131 19 44 chr5 186469398 186469718 -16615814 + AluSx SINE Alu 1 312 0 239 306 16 8 chr5 186470620 186470741 -16614791 + (TA)n Simple_repeat Simple_repeat 1 122 0 2550 37 7 0 chr5 186471165 186471465 -16614067 + AluY SINE Alu 1 302 -9 207 273 0 0 chr5 186472498 186472542 -16612990 + (CCA)n Simple_repeat Simple_repeat 2 45 0 220 299 0 0 chr5 186472553 186472620 -16612912 + A-rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr5 186472693 186472714 -16612818 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 186475776 186475804 -16609728 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 186478392 186478420 -16607112 + AT_rich Low_complexity Low_complexity 1 28 0 368 371 105 22 chr5 186479249 186479659 -16605873 - L2 LINE L2 0 3272 2829 268 352 73 47 chr5 186479726 186480027 -16605505 - L2 LINE L2 -601 2713 2405 993 298 26 31 chr5 186480084 186480470 -16605062 + L2 LINE L2 2004 2387 -927 316 85 0 0 chr5 186480479 186480526 -16605006 + MADE1 DNA Mariner 34 80 0 371 180 54 36 chr5 186480628 186480739 -16604793 - L2 LINE L2 -675 2639 2527 * 388 322 123 45 chr5 186480734 186481116 -16604416 + L2 LINE L2 2902 3313 0 809 243 45 23 chr5 186482215 186482490 -16603042 + L1ME2 LINE L1 5878 6163 -3 10575 205 50 26 chr5 186482631 186483160 -16602372 + L1M3 LINE L1 15 530 -5852 2041 135 0 23 chr5 186483160 186483464 -16602068 + AluSx SINE Alu 1 297 -15 10575 205 50 26 chr5 186483464 186487002 -16598530 + L1M3 LINE L1 530 4184 -2198 606 120 43 0 chr5 186487002 186487094 -16598438 - LTR12 LTR ERV1 -4 710 615 362 253 10 0 chr5 186487096 186487195 -16598337 - LTR30 LTR ERV1 -79 643 544 1435 143 79 43 chr5 186487195 186487613 -16597919 - LTR12 LTR ERV1 -417 2021 1 301 256 37 0 chr5 186487613 186487695 -16597837 + L1M3 LINE L1 4177 4261 -2121 587 99 0 0 chr5 186487696 186487777 -16597755 + AluY SINE Alu 1 81 -229 5283 212 33 25 chr5 186487781 186489287 -16596245 + L1M3 LINE L1 4254 5768 -651 36 53 0 0 chr5 186489593 186489650 -16595882 + AT_rich Low_complexity Low_complexity 1 57 0 295 268 22 109 chr5 186491797 186491935 -16593597 + L2 LINE L2 3188 3313 0 252 86 0 0 chr5 186492576 186492611 -16592921 + (T)n Simple_repeat Simple_repeat 1 35 0 1967 142 3 0 chr5 186493814 186494117 -16591415 - AluJb SINE Alu -8 304 1 269 315 287 7 chr5 186494230 186494516 -16591016 - L2 LINE L2 -1 3312 2947 269 259 223 18 chr5 186494583 186494749 -16590783 + L1MC/D LINE L1 5609 5808 -2000 908 181 24 6 chr5 186494950 186495116 -16590416 + FRAM SINE Alu 1 169 -7 502 198 32 13 chr5 186495130 186495287 -16590245 + GA-rich Low_complexity Low_complexity 3 162 0 2194 131 43 74 chr5 186495332 186495523 -16590009 + MSTB1 LTR MaLR 3 198 -234 2336 81 0 0 chr5 186495523 186495808 -16589724 + AluSx SINE Alu 1 285 -27 2194 131 43 74 chr5 186495808 186496060 -16589472 + MSTB1 LTR MaLR 198 432 0 1825 165 3 10 chr5 186496161 186496464 -16589068 + AluJo SINE Alu 6 306 -6 303 28 0 0 chr5 186497820 186497856 -16587676 + (TG)n Simple_repeat Simple_repeat 2 37 0 2105 147 0 0 chr5 186498578 186498890 -16586642 - AluSx SINE Alu 0 312 1 372 22 0 0 chr5 186498990 186499035 -16586497 + (TG)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr5 186501985 186502009 -16583523 + AT_rich Low_complexity Low_complexity 1 24 0 1088 140 0 0 chr5 186502319 186502499 -16583033 + AluSg/x SINE Alu 133 312 0 1617 58 0 19 chr5 186502902 186503110 -16582422 - AluY SINE Alu -3 308 105 1798 188 28 11 chr5 186504631 186504988 -16580544 + MLT1A1 LTR MaLR 1 363 -2 287 304 40 47 chr5 186505301 186505449 -16580083 - MIR3 SINE MIR -59 149 3 333 0 0 0 chr5 186506175 186506212 -16579320 + (TC)n Simple_repeat Simple_repeat 1 37 0 296 279 96 70 chr5 186506329 186506558 -16578974 + MIR SINE MIR 3 237 -25 338 268 37 100 chr5 186506743 186506933 -16578599 - L2 LINE L2 0 3313 3136 189 74 0 0 chr5 186506978 186507005 -16578527 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2192 101 3 28 chr5 186508116 186508433 -16577099 + AluSx SINE Alu 4 312 0 23 0 0 0 chr5 186508839 186508862 -16576670 + AT_rich Low_complexity Low_complexity 1 23 0 180 300 80 10 chr5 186510010 186510110 -16575422 + L3 LINE CR1 1306 1412 -165 2209 97 27 3 chr5 186510865 186511164 -16574368 - AluSx SINE Alu -6 306 1 220 238 48 48 chr5 186512057 186512141 -16573391 + L2 LINE L2 3230 3313 0 273 57 0 0 chr5 186512459 186512494 -16573038 + (CA)n Simple_repeat Simple_repeat 1 35 0 33 43 0 0 chr5 186512866 186512913 -16572619 + AT_rich Low_complexity Low_complexity 1 47 0 2005 138 3 0 chr5 186513041 186513324 -16572208 + AluSx SINE Alu 1 284 -28 23 33 0 0 chr5 186513325 186513355 -16572177 + AT_rich Low_complexity Low_complexity 1 30 0 336 354 58 52 chr5 186514015 186514343 -16571189 + L3 LINE CR1 1211 1540 -37 193 355 89 8 chr5 186516189 186516313 -16569219 - L2 LINE L2 -36 3236 3103 192 200 0 0 chr5 186516646 186516696 -16568836 + (CAG)n Simple_repeat Simple_repeat 3 52 0 439 240 85 8 chr5 186517528 186517657 -16567875 - Zaphod DNA AcHobo -1 4030 3892 4961 54 28 0 chr5 186517678 186518550 -16566982 + L1PA5 LINE L1 5029 5921 -233 1798 169 0 7 chr5 186519109 186519405 -16566127 - AluJb SINE Alu -18 294 1 2086 149 0 13 chr5 186519523 186519838 -16565694 - AluSx SINE Alu -1 311 1 24 32 0 0 chr5 186519959 186519990 -16565542 + AT_rich Low_complexity Low_complexity 1 31 0 787 304 93 4 chr5 186520268 186520548 -16564984 - MER102b DNA MER1_type -4 337 33 194 250 50 17 chr5 186521096 186521156 -16564376 + MIR3 SINE MIR 98 159 -49 297 294 50 17 chr5 186521243 186521362 -16564170 - MIR SINE MIR -16 246 124 586 224 115 19 chr5 186521576 186521737 -16563795 + MER5A DNA MER1_type 4 188 -1 1663 199 60 9 chr5 186521929 186522276 -16563256 - MLT1A1 LTR MaLR 0 365 1 2233 148 25 59 chr5 186523844 186524283 -16561249 - MSTC LTR MaLR -4 424 1 2135 50 0 4 chr5 186524319 186524577 -16560955 - AluY SINE Alu -54 257 1 207 139 0 0 chr5 186524728 186524764 -16560768 + (TA)n Simple_repeat Simple_repeat 1 36 0 1504 209 29 20 chr5 186524773 186525123 -16560409 + MLT1A1 LTR MaLR 1 353 -12 504 330 53 29 chr5 186527091 186527300 -16558232 - MIR SINE MIR -15 247 34 33 0 0 0 chr5 186528079 186528112 -16557420 + AT_rich Low_complexity Low_complexity 1 33 0 188 306 252 0 chr5 186528215 186528326 -16557206 - L2 LINE L2 -8 3305 3167 5479 101 0 1 chr5 186528348 186529112 -16556420 - L1PA10 LINE L1 0 6168 5406 411 115 0 26 chr5 186529135 186529213 -16556319 - L1PB1 LINE L1 -3 6148 6073 22 0 0 0 chr5 186529235 186529257 -16556275 + AT_rich Low_complexity Low_complexity 1 22 0 229 235 39 20 chr5 186529298 186529349 -16556183 - MIR SINE MIR -208 54 3 332 296 20 0 chr5 186529584 186529682 -16555850 - MIR SINE MIR 0 262 163 747 235 30 26 chr5 186529682 186529912 -16555620 + LTR1 LTR ERV1 1 231 -554 903 222 39 10 chr5 186530145 186530348 -16555184 - MLT1F1 LTR MaLR 0 567 359 701 244 177 28 chr5 186530321 186530604 -16554928 + MLT1E LTR MaLR 11 335 -258 * 394 296 73 41 chr5 186530624 186530844 -16554688 - L2 LINE L2 -352 2962 2736 298 335 87 0 chr5 186532272 186532433 -16553099 + L1ME LINE L1 5485 5659 -462 708 249 10 48 chr5 186532542 186532751 -16552781 - MIR SINE MIR 0 262 62 538 282 33 142 chr5 186534981 186535375 -16550157 + L2 LINE L2 2920 3270 -2 25 51 0 0 chr5 186536632 186536671 -16548861 + AT_rich Low_complexity Low_complexity 1 39 0 312 337 55 32 chr5 186537786 186538003 -16547529 + MIR3 SINE MIR 2 213 -49 355 308 108 37 chr5 186538105 186538198 -16547334 + MIR SINE MIR 25 110 -152 415 157 0 36 chr5 186538198 186538281 -16547251 + MADE1 DNA Mariner 1 80 0 355 308 108 37 chr5 186538281 186538401 -16547131 + MIR SINE MIR 110 253 -9 782 184 211 32 chr5 186538634 186538824 -16546708 + MER58A DNA MER1_type 1 224 0 517 298 99 23 chr5 186539129 186539623 -16545909 - Tigger8 DNA MER2_type -32 634 56 1010 207 73 107 chr5 186539802 186540212 -16545320 - MSTD LTR MaLR 0 396 1 275 254 18 53 chr5 186541276 186541390 -16544142 - MIR SINE MIR -117 145 36 1083 119 0 0 chr5 186541426 186541610 -16543922 - AluSg/x SINE Alu 0 327 144 1558 180 147 33 chr5 186541613 186541980 -16543552 - MSTB1 LTR MaLR -23 409 1 532 271 130 14 chr5 186542022 186542229 -16543303 + MIR SINE MIR 14 244 -18 1403 108 52 0 chr5 186542425 186542637 -16542895 - L1PA11 LINE L1 -2 6172 5950 267 31 0 0 chr5 186543851 186543883 -16541649 + (CAG)n Simple_repeat Simple_repeat 2 33 0 216 211 0 19 chr5 186543888 186543940 -16541592 + (TAG)n Simple_repeat Simple_repeat 3 53 0 771 234 20 25 chr5 186543940 186544141 -16541391 - MIR SINE MIR -10 252 53 243 284 0 45 chr5 186544245 186544312 -16541220 - MIR SINE MIR -195 67 4 380 359 53 0 chr5 186544872 186545003 -16540529 + L2 LINE L2 3134 3271 -1 274 286 0 57 chr5 186545013 186545118 -16540414 - MIR SINE MIR -76 186 88 292 268 52 0 chr5 186545187 186545284 -16540248 - MER69 DNA AcHobo 0 2526 2425 2087 107 62 0 chr5 186545284 186545573 -16539959 + AluSx SINE Alu 1 307 -5 276 269 13 0 chr5 186545580 186545658 -16539874 - MER69 DNA AcHobo -2447 79 1 762 293 111 48 chr5 186546380 186546858 -16538674 + L2 LINE L2 2042 2549 -765 590 259 37 68 chr5 186547039 186547308 -16538224 + L1MC5 LINE L1 6697 7038 -1004 1974 258 65 3 chr5 186547472 186548041 -16537491 - L1ME1 LINE L1 -5 6161 5558 554 253 28 6 chr5 186548094 186548276 -16537256 + L1MC5 LINE L1 7008 7193 -768 485 242 100 35 chr5 186548349 186548580 -16536952 + L1MC5 LINE L1 7289 7534 -427 392 263 45 50 chr5 186548673 186548871 -16536661 + L1ME3A LINE L1 5966 6162 -8 846 158 0 0 chr5 186548873 186549000 -16536532 + FLAM_C SINE Alu 1 127 -16 309 316 66 0 chr5 186549034 186549170 -16536362 + L2 LINE L2 2556 2700 -614 2252 94 10 3 chr5 186549186 186549493 -16536039 + AluSg SINE Alu 1 309 -1 2402 149 59 2 chr5 186549506 186549928 -16535604 - Tigger2 DNA MER2_type 0 2718 2273 501 127 0 38 chr5 186549908 186549987 -16535545 - Tigger2 DNA MER2_type -2642 76 1 * 329 274 132 80 chr5 186549988 186550514 -16535018 + L2 LINE L2 2714 3312 -1 270 0 0 0 chr5 186551268 186551298 -16534234 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1397 119 66 43 chr5 186552573 186553014 -16532518 + LTR54 LTR ERV1 1 510 0 1532 226 34 0 chr5 186553079 186553375 -16532157 - MER21B LTR ERV1 -37 826 521 1988 197 39 125 chr5 186553375 186554127 -16531405 - LTR8A LTR ERV1 0 727 41 2735 169 85 67 chr5 186554127 186554841 -16530691 - LTR8A LTR ERV1 0 727 1 1077 230 140 113 chr5 186554842 186555312 -16530220 - MER21B LTR ERV1 -340 523 41 706 287 56 19 chr5 186555444 186555660 -16529872 - MIR SINE MIR -5 257 34 269 281 73 10 chr5 186555674 186555770 -16529762 - MER5A DNA MER1_type -23 166 65 295 241 121 0 chr5 186557610 186557693 -16527839 + MIR SINE MIR 75 167 -95 198 143 0 0 chr5 186557780 186557815 -16527717 + (TTA)n Simple_repeat Simple_repeat 2 36 0 642 249 51 11 chr5 186558055 186558232 -16527300 + MLT1J2 LTR MaLR 37 220 -230 587 280 125 44 chr5 186558560 186558856 -16526676 + HAL1 LINE L1 1562 1881 -626 759 256 68 29 chr5 186558899 186559118 -16526414 + HAL1 LINE L1 1991 2231 -276 393 22 0 0 chr5 186559118 186559164 -16526368 + (TG)n Simple_repeat Simple_repeat 2 47 0 759 256 68 29 chr5 186559164 186559295 -16526237 + HAL1 LINE L1 2231 2355 -152 2198 105 0 37 chr5 186559691 186560015 -16525517 - AluSx SINE Alu 0 312 1 289 337 213 29 chr5 186560039 186560570 -16524962 + L2 LINE L2 2571 3272 0 21 36 0 0 chr5 186560648 186560676 -16524856 + AT_rich Low_complexity Low_complexity 1 28 0 285 338 81 12 chr5 186560874 186561034 -16524498 + MER5B DNA MER1_type 3 173 -5 282 302 82 44 chr5 186561080 186561167 -16524365 - MIR SINE MIR -11 251 169 1677 188 0 13 chr5 186561167 186561470 -16524062 + AluSx SINE Alu 2 300 -12 282 302 82 44 chr5 186561470 186561564 -16523968 - MIR SINE MIR -93 169 63 224 311 14 14 chr5 186561961 186562035 -16523497 + MER5A DNA MER1_type 92 165 -24 224 372 0 0 chr5 186563177 186563255 -16522277 + MER91A DNA MER1_type 2 79 -117 185 258 15 30 chr5 186563554 186563620 -16521912 - MER5A DNA MER1_type -124 65 1 232 231 0 0 chr5 186563868 186563920 -16521612 - L2 LINE L2 -1 3312 3261 305 282 61 30 chr5 186564826 186564957 -16520575 + MIR SINE MIR 93 227 -35 406 300 33 0 chr5 186564981 186565101 -16520431 - L2 LINE L2 -5 3308 3185 696 146 0 0 chr5 186565221 186565331 -16520201 - FAM SINE Alu -16 169 60 2213 97 7 3 chr5 186565518 186565817 -16519715 - AluSq SINE Alu -13 300 1 1809 186 15 3 chr5 186565862 186566195 -16519337 - MER7A DNA MER2_type -1 345 11 261 0 0 0 chr5 186566269 186566298 -16519234 + (A)n Simple_repeat Simple_repeat 1 29 0 233 276 0 26 chr5 186567429 186567505 -16518027 + CT-rich Low_complexity Low_complexity 1 74 0 180 338 29 29 chr5 186567660 186567728 -16517804 + L2 LINE L2 328 395 -2919 1760 170 0 13 chr5 186571859 186572159 -16513373 - AluJo SINE Alu -16 296 1 25 0 0 0 chr5 186573145 186573170 -16512362 + AT_rich Low_complexity Low_complexity 1 25 0 712 220 21 37 chr5 186574724 186574915 -16510617 - MER5A DNA MER1_type 0 189 2 214 291 25 25 chr5 186575132 186575211 -16510321 - L2 LINE L2 0 3272 3194 848 188 83 86 chr5 186575382 186575706 -16509826 + MER113 DNA MER1_type? 146 468 -53 29 0 0 0 chr5 186575751 186575780 -16509752 + AT_rich Low_complexity Low_complexity 1 29 0 244 359 43 0 chr5 186576588 186576705 -16508827 - MIR SINE MIR -63 145 24 639 269 68 32 chr5 186576754 186576973 -16508559 - MIR SINE MIR 0 262 36 29 0 0 0 chr5 186577561 186577590 -16507942 + AT_rich Low_complexity Low_complexity 1 29 0 336 316 43 74 chr5 186577886 186578212 -16507320 - L1MC/D LINE L1 -1986 5822 5507 28 0 0 0 chr5 186578477 186578505 -16507027 + AT_rich Low_complexity Low_complexity 1 28 0 295 282 221 7 chr5 186579900 186580049 -16505483 + MIR SINE MIR 26 206 -56 257 118 0 0 chr5 186580067 186580118 -16505414 - L1MA3 LINE L1 0 6305 6255 183 204 0 0 chr5 186580732 186580781 -16504751 + T-rich Low_complexity Low_complexity 1 49 0 378 364 55 72 chr5 186580855 186581314 -16504218 - L2 LINE L2 -1 3271 2821 22 0 0 0 chr5 186582345 186582367 -16503165 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr5 186583309 186583339 -16502193 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 24 48 24 chr5 186583389 186583431 -16502101 + (TA)n Simple_repeat Simple_repeat 2 44 0 402 211 78 47 chr5 186584578 186584705 -16500827 + MER20 DNA MER1_type 1 131 -88 1322 214 11 21 chr5 186584705 186584985 -16500547 - MER90 LTR ERV1 0 614 338 234 0 0 0 chr5 186585057 186585083 -16500449 + (T)n Simple_repeat Simple_repeat 1 26 0 4185 152 6 63 chr5 186585150 186586017 -16499515 + L1MA10 LINE L1 5433 6249 -85 251 200 17 50 chr5 186586026 186586086 -16499446 + L2 LINE L2 3215 3272 0 678 362 51 33 chr5 186586521 186587032 -16498500 + L3 LINE CR1 1 520 -1057 288 291 47 27 chr5 186587170 186587318 -16498214 + MIR3 SINE MIR 51 201 -7 195 338 50 12 chr5 186588804 186588884 -16496648 - L2 LINE L2 -24 3289 3207 182 311 78 109 chr5 186588878 186588991 -16496541 + L2 LINE L2 2594 2709 -605 * 2194 105 3 3 chr5 186588991 186589286 -16496246 + AluSc SINE Alu 1 295 -14 182 311 78 109 chr5 186589286 186589568 -16495964 + L2 LINE L2 2709 2977 -337 207 0 0 0 chr5 186589945 186589968 -16495564 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1819 139 3 20 chr5 186590399 186590694 -16494838 + AluSx SINE Alu 1 290 -22 501 242 86 0 chr5 186591189 186591317 -16494215 - L2 LINE L2 -1 3271 3133 325 200 253 11 chr5 186592410 186592505 -16493027 + MER5A DNA MER1_type 60 177 -12 503 198 157 51 chr5 186592798 186593091 -16492441 + MER113 DNA MER1_type? 52 375 -146 207 259 19 0 chr5 186596122 186596176 -16489356 - L2 LINE L2 -10 3262 3208 341 271 53 8 chr5 186597926 186598059 -16487473 - MIR SINE MIR 0 262 124 480 286 104 25 chr5 186598344 186598585 -16486947 - MLT1K LTR MaLR -81 507 248 377 262 79 8 chr5 186598827 186598953 -16486579 + MIR SINE MIR 91 225 -37 209 184 0 0 chr5 186599066 186599104 -16486428 + (CAT)n Simple_repeat Simple_repeat 3 40 0 189 333 0 0 chr5 186599104 186599167 -16486365 + MIR SINE MIR 196 258 -4 2366 92 0 0 chr5 186599898 186600192 -16485340 + AluSx SINE Alu 1 294 -18 391 345 29 6 chr5 186600880 186601051 -16484481 - MIR SINE MIR 0 262 88 216 295 0 9 chr5 186601416 186601549 -16483983 + (TAAA)n Simple_repeat Simple_repeat 1 131 0 180 208 62 21 chr5 186602490 186602538 -16482994 + MIR3 SINE MIR 117 166 -42 186 103 0 0 chr5 186602555 186602584 -16482948 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr5 186602717 186602745 -16482787 + AT_rich Low_complexity Low_complexity 1 28 0 2433 76 0 0 chr5 186604336 186604637 -16480895 + AluY SINE Alu 1 301 -10 22 35 0 0 chr5 186604738 186604767 -16480765 + AT_rich Low_complexity Low_complexity 1 29 0 2355 90 0 3 chr5 186606649 186606960 -16478572 - AluY SINE Alu -1 310 1 387 83 0 0 chr5 186607017 186607077 -16478455 + (TG)n Simple_repeat Simple_repeat 2 61 0 315 100 0 0 chr5 186607631 186607681 -16477851 - L1MC1 LINE L1 -2 6331 6282 1271 152 118 48 chr5 186607708 186608023 -16477509 - MER44D DNA MER2_type -2 607 1 1043 163 163 0 chr5 186608023 186608238 -16477294 - L1MC1 LINE L1 -61 6272 6023 2645 162 206 54 chr5 186611149 186611866 -16473666 - LTR1B LTR ERV1 0 826 1 265 301 187 0 chr5 186611928 186612051 -16473481 + L2 LINE L2 3166 3311 -2 300 255 21 69 chr5 186613708 186613853 -16471679 - MER5A DNA MER1_type -8 181 44 588 271 11 6 chr5 186614097 186614274 -16471258 - MER5B DNA MER1_type 0 178 1 22 88 0 0 chr5 186614361 186614418 -16471114 + AT_rich Low_complexity Low_complexity 1 57 0 230 278 37 0 chr5 186614482 186614590 -16470942 - MER113 DNA MER1_type? -408 113 2 256 139 0 0 chr5 186615092 186615135 -16470397 + MADE1 DNA Mariner 1 43 -37 301 354 97 28 chr5 186615297 186615721 -16469811 + L1ME4a LINE L1 4942 5394 -752 315 326 62 22 chr5 186615796 186616069 -16469463 + L1ME4a LINE L1 5542 5825 -296 328 300 72 36 chr5 186616239 186616462 -16469070 + L1ME4a LINE L1 5834 6064 -57 247 96 96 0 chr5 186616918 186616970 -16468562 + BSR/Beta Satellite Satellite 37 93 -49 489 239 36 14 chr5 186617257 186617395 -16468137 + MER33 DNA MER1_type 9 149 -175 714 149 43 77 chr5 186617413 186617621 -16467911 + MER33 DNA MER1_type 124 324 0 195 315 19 0 chr5 186617624 186617678 -16467854 + L3 LINE CR1 1516 1570 -7 195 271 169 0 chr5 186617683 186617742 -16467790 - MIR SINE MIR -71 191 123 460 160 0 21 chr5 186618084 186618178 -16467354 + L1MA6 LINE L1 6205 6296 -4 180 0 0 0 chr5 186619007 186619027 -16466505 + (A)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 186619791 186619814 -16465718 + (T)n Simple_repeat Simple_repeat 1 23 0 2250 51 0 7 chr5 186621707 186621980 -16463552 - AluY SINE Alu -7 304 34 228 241 19 0 chr5 186622211 186622265 -16463267 + GA-rich Low_complexity Low_complexity 1 55 0 29 47 0 0 chr5 186622698 186622741 -16462791 + AT_rich Low_complexity Low_complexity 1 43 0 289 391 6 6 chr5 186622741 186622902 -16462630 + LTR16C LTR ERVL 1 161 -330 * 587 275 67 0 chr5 186622899 186623077 -16462455 + LTR16C LTR ERVL 293 482 -9 8022 241 75 40 chr5 186623199 186624559 -16460973 + Zaphod DNA AcHobo 14 1326 -2705 3314 102 2 0 chr5 186624559 186625011 -16460521 + MLT2A2 LTR ERVL 1 453 0 8022 241 75 40 chr5 186625011 186626827 -16458705 + Zaphod DNA AcHobo 1326 3299 -732 944 254 29 0 chr5 186626827 186627032 -16458500 + MER58A DNA MER1_type 1 211 -13 274 208 42 17 chr5 186627114 186627234 -16458298 + Zaphod DNA AcHobo 3601 3723 -308 7951 160 130 39 chr5 186627245 186627399 -16458133 - MER52A LTR ERV1 0 1755 1616 3414 131 84 16 chr5 186627399 186627971 -16457561 - LTR9 LTR ERV1 0 612 2 7951 160 130 39 chr5 186627971 186629425 -16456107 - MER52A LTR ERV1 -139 1616 1 37 39 0 0 chr5 186629502 186629553 -16455979 + AT_rich Low_complexity Low_complexity 1 51 0 921 204 38 107 chr5 186629559 186629781 -16455751 + Zaphod DNA AcHobo 3684 3871 -160 7009 62 3 0 chr5 186629781 186630909 -16454623 - L1PA5 LINE L1 -2 6152 5024 921 204 38 107 chr5 186630909 186631059 -16454473 + Zaphod DNA AcHobo 3871 4030 -1 192 200 0 0 chr5 186631893 186631943 -16453589 + (CTG)n Simple_repeat Simple_repeat 3 52 0 193 355 89 8 chr5 186632276 186632400 -16453132 + L2 LINE L2 3103 3236 -36 336 354 58 52 chr5 186634246 186634574 -16450958 - L3 LINE CR1 -37 1540 1211 23 33 0 0 chr5 186635234 186635264 -16450268 + AT_rich Low_complexity Low_complexity 1 30 0 2005 138 3 0 chr5 186635265 186635548 -16449984 - AluSx SINE Alu -28 284 1 33 43 0 0 chr5 186635676 186635723 -16449809 + AT_rich Low_complexity Low_complexity 1 47 0 291 54 0 0 chr5 186636095 186636132 -16449400 + (TG)n Simple_repeat Simple_repeat 1 37 0 220 238 48 48 chr5 186636450 186636534 -16448998 - L2 LINE L2 0 3313 3230 2209 97 27 3 chr5 186637427 186637726 -16447806 + AluSx SINE Alu 1 306 -6 180 300 80 10 chr5 186638481 186638581 -16446951 - L3 LINE CR1 -165 1412 1306 23 0 0 0 chr5 186639729 186639752 -16445780 + AT_rich Low_complexity Low_complexity 1 23 0 2195 109 0 28 chr5 186640167 186640488 -16445044 - AluSx SINE Alu 0 312 1 189 74 0 0 chr5 186641605 186641632 -16443900 + (TTA)n Simple_repeat Simple_repeat 1 27 0 353 263 37 100 chr5 186641677 186641867 -16443665 + L2 LINE L2 3136 3313 0 296 279 96 70 chr5 186642052 186642281 -16443251 - MIR SINE MIR -25 237 3 279 0 0 0 chr5 186642398 186642429 -16443103 + (GA)n Simple_repeat Simple_repeat 1 31 0 287 304 40 47 chr5 186643155 186643303 -16442229 + MIR3 SINE MIR 3 149 -59 1798 188 28 11 chr5 186643616 186643973 -16441559 - MLT1A1 LTR MaLR -2 363 1 1642 52 0 19 chr5 186645499 186645709 -16439823 + AluY SINE Alu 105 310 -1 1023 143 7 0 chr5 186646117 186646291 -16439241 - AluSg/x SINE Alu 0 309 135 24 0 0 0 chr5 186646601 186646625 -16438907 + AT_rich Low_complexity Low_complexity 1 24 0 267 54 0 0 chr5 186649575 186649612 -16435920 + (CA)n Simple_repeat Simple_repeat 2 38 0 2140 142 0 0 chr5 186649712 186650023 -16435509 + AluSx SINE Alu 1 311 -1 333 0 0 0 chr5 186650775 186650812 -16434720 + (CA)n Simple_repeat Simple_repeat 1 37 0 1810 166 3 10 chr5 186652168 186652469 -16433063 - AluJo SINE Alu -8 304 6 2194 131 43 74 chr5 186652570 186652822 -16432710 - MSTB1 LTR MaLR 0 432 198 2336 81 0 0 chr5 186652822 186653107 -16432425 - AluSx SINE Alu -27 285 1 2194 131 43 74 chr5 186653107 186653298 -16432234 - MSTB1 LTR MaLR -234 198 3 520 195 31 13 chr5 186653351 186653510 -16432022 + CT-rich Low_complexity Low_complexity 3 164 0 908 181 24 6 chr5 186653524 186653690 -16431842 - FRAM SINE Alu -7 169 1 269 259 223 18 chr5 186653891 186654057 -16431475 - L1MC/D LINE L1 -2000 5808 5609 269 315 287 7 chr5 186654124 186654410 -16431122 + L2 LINE L2 2947 3312 -1 1967 142 3 0 chr5 186654523 186654826 -16430706 + AluJb SINE Alu 1 304 -8 295 268 22 109 chr5 186656697 186656835 -16428697 - L2 LINE L2 0 3313 3188 36 53 0 0 chr5 186658982 186659039 -16426493 + AT_rich Low_complexity Low_complexity 1 57 0 39 74 0 0 chr5 186659411 186659492 -16426040 + AT_rich Low_complexity Low_complexity 1 81 0 2002 121 11 14 chr5 186659539 186659848 -16425684 + AluSq SINE Alu 3 310 0 25 83 0 0 chr5 186660985 186661045 -16424487 + AT_rich Low_complexity Low_complexity 1 60 0 3197 138 25 17 chr5 186661498 186662021 -16423511 - MER1A DNA MER1_type 0 527 1 3676 207 36 33 chr5 186662763 186663250 -16422282 - L1 LINE L1 -1249 4897 4404 255 61 0 0 chr5 186663250 186663283 -16422249 + (TTTTA)n Simple_repeat Simple_repeat 5 37 0 3676 207 36 33 chr5 186663283 186663738 -16421794 - L1 LINE L1 -1742 4404 3952 1689 181 7 47 chr5 186663762 186664192 -16421340 + L1 LINE L1 3463 3875 -2271 1590 278 70 44 chr5 186664229 186665179 -16420353 - L1MCc LINE L1 -3873 3249 2325 1793 163 10 3 chr5 186665179 186665486 -16420046 - AluJo SINE Alu -3 309 1 1590 278 70 44 chr5 186665486 186666403 -16419129 - L1MCc LINE L1 -4797 2325 1128 241 206 68 27 chr5 186666544 186666617 -16418915 - L1MCc LINE L1 -5535 888 813 587 297 103 39 chr5 186666921 186667328 -16418204 - L1MCc LINE L1 -5987 436 4 290 338 31 12 chr5 186667410 186667570 -16417962 - MIR SINE MIR 0 262 100 442 275 65 69 chr5 186667577 186667742 -16417790 + L1M4 LINE L1 5265 5429 -749 2203 116 0 13 chr5 186667742 186668043 -16417489 + AluSq SINE Alu 1 297 -16 442 275 65 69 chr5 186668043 186668121 -16417411 + L1M4 LINE L1 5429 5506 -672 1502 220 0 29 chr5 186668121 186668434 -16417098 + AluJo SINE Alu 1 304 -8 442 275 65 69 chr5 186668434 186668622 -16416910 + L1M4 LINE L1 5506 5695 -483 261 324 0 15 chr5 186668630 186668698 -16416834 - MIR SINE MIR -193 69 3 809 40 0 0 chr5 186670017 186670118 -16415414 - L1HS LINE L1 -861 5285 5185 * 7891 1 0 1 chr5 186670117 186671000 -16414532 + L1HS LINE L1 5274 6155 0 2830 157 8 4 chr5 186671950 186672433 -16413099 - MER31A LTR ERV1 0 485 1 218 28 0 56 chr5 186672973 186673009 -16412523 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr5 186673157 186673185 -16412347 + AT_rich Low_complexity Low_complexity 1 28 0 399 284 8 75 chr5 186673692 186673826 -16411706 - MIR3 SINE MIR -1 207 83 362 314 98 10 chr5 186673899 186674093 -16411439 - MIR SINE MIR -11 251 41 265 268 123 51 chr5 186674642 186674780 -16410752 - LTR16C LTR ERVL -4 487 340 197 302 0 0 chr5 186675365 186675418 -16410114 - L3 LINE CR1 -1 1576 1524 2219 68 68 0 chr5 186675772 186676053 -16409479 - AluY SINE Alu -11 300 1 240 167 0 0 chr5 186676248 186676296 -16409236 + (CATA)n Simple_repeat Simple_repeat 4 51 0 429 265 52 15 chr5 186676298 186676434 -16409098 - MLT1K LTR MaLR -71 517 377 447 332 126 20 chr5 186676486 186676733 -16408799 - MLT1K LTR MaLR -309 279 7 191 390 60 0 chr5 186676771 186676871 -16408661 + L2 LINE L2 3134 3239 -33 2073 114 0 4 chr5 186678795 186679104 -16406428 + AluSc SINE Alu 1 308 0 23 33 0 0 chr5 186681419 186681449 -16404083 + AT_rich Low_complexity Low_complexity 1 30 0 616 321 87 46 chr5 186682317 186682413 -16403119 + L2 LINE L2 2652 2743 -570 2329 101 0 0 chr5 186682413 186682711 -16402821 + AluSg SINE Alu 1 298 -12 616 321 87 46 chr5 186682711 186683255 -16402277 + L2 LINE L2 2743 3313 0 27 49 0 0 chr5 186684491 186684532 -16401000 + AT_rich Low_complexity Low_complexity 1 41 0 2454 70 0 0 chr5 186684560 186684859 -16400673 + AluY SINE Alu 1 299 -12 1792 229 66 34 chr5 186685045 186685453 -16400079 - LTR40a LTR ERVL 0 519 91 1901 136 3 38 chr5 186685453 186685769 -16399763 + AluSx SINE Alu 1 305 -7 1792 229 66 34 chr5 186685769 186685863 -16399669 - LTR40a LTR ERVL -428 91 1 459 301 48 7 chr5 186686833 186686979 -16398553 + MIR SINE MIR 103 254 -8 1515 173 18 99 chr5 186687122 186687556 -16397976 - L1MB8 LINE L1 0 6178 5780 1239 158 121 75 chr5 186687556 186687863 -16397669 + THE1B LTR MaLR 1 327 -37 2113 106 65 0 chr5 186687863 186688156 -16397376 - AluSx SINE Alu 0 312 1 1239 158 121 75 chr5 186688156 186688196 -16397336 + THE1B LTR MaLR 327 364 0 3678 129 3 83 chr5 186688199 186688703 -16396829 + THE1B-int LTR MaLR 4 438 -1142 1788 116 4 29 chr5 186688703 186688979 -16396553 + AluSx SINE Alu 23 291 -21 3678 129 3 83 chr5 186688979 186689172 -16396360 + THE1B-int LTR MaLR 438 645 -935 1097 100 7 0 chr5 186689172 186689322 -16396210 + THE1C LTR MaLR 225 375 0 1656 230 53 27 chr5 186689324 186690072 -16395460 - L1MB8 LINE L1 -402 5782 5055 2319 103 0 0 chr5 186690072 186690374 -16395158 - AluSc SINE Alu -7 302 1 1656 230 53 27 chr5 186690374 186693003 -16392529 - L1MB8 LINE L1 -1129 5055 2262 410 305 94 65 chr5 186693069 186693377 -16392155 - L1M4b LINE L1 -4349 2789 2473 1156 297 23 17 chr5 186693554 186694036 -16391496 - L1M4b LINE L1 -4571 2388 1904 * 30851 117 11 57 chr5 186694032 186700491 -16385041 - L1PA7 LINE L1 -1 6153 2 1983 148 0 3 chr5 186700723 186701027 -16384505 - AluSx SINE Alu -9 303 1 672 220 28 88 chr5 186701281 186701350 -16384182 - MER5B DNA MER1_type 0 178 106 2011 129 3 10 chr5 186701350 186701652 -16383880 + AluSx SINE Alu 1 300 -12 672 220 28 88 chr5 186701652 186701764 -16383768 - MER5B DNA MER1_type -72 106 8 5543 268 63 10 chr5 186701764 186703496 -16382036 - L1M4b LINE L1 -5037 1818 11 1613 195 6 22 chr5 186703690 186704003 -16381529 - AluJo SINE Alu -2 310 3 189 0 0 0 chr5 186704492 186704513 -16381019 + (TA)n Simple_repeat Simple_repeat 1 21 0 693 279 19 37 chr5 186704566 186704781 -16380751 + MER20 DNA MER1_type 9 219 0 2052 231 80 8 chr5 186705215 186705716 -16379816 + MLT1F LTR MaLR 5 541 -1 240 94 0 0 chr5 186706473 186706505 -16379027 - U7 snRNA snRNA -30 33 2 380 344 31 19 chr5 186706612 186706772 -16378760 + L2 LINE L2 3111 3272 0 2120 107 10 0 chr5 186707047 186707337 -16378195 + AluSp SINE Alu 1 293 -20 1459 184 7 52 chr5 186707353 186707658 -16377874 - AluJo SINE Alu -17 295 5 2147 119 0 33 chr5 186708891 186709193 -16376339 + AluSx SINE Alu 1 292 -20 591 231 45 57 chr5 186710937 186711201 -16374331 + L1MC5 LINE L1 7653 7913 -48 2081 71 0 30 chr5 186711963 186712232 -16373300 + AluY SINE Alu 39 299 -12 8033 169 16 13 chr5 186712332 186712692 -16372840 - L1PB1 LINE L1 0 6151 5794 572 62 12 0 chr5 186712692 186712773 -16372759 + (TA)n Simple_repeat Simple_repeat 2 83 0 8033 169 16 13 chr5 186712773 186714595 -16370937 - L1PB1 LINE L1 -357 5794 3958 1988 140 0 23 chr5 186714595 186714903 -16370629 - AluSg SINE Alu -9 301 1 8033 169 16 13 chr5 186714903 186715329 -16370203 - L1PB1 LINE L1 -2193 3958 3535 194 354 0 15 chr5 186715574 186715639 -16369893 - L3b LINE CR1 -232 1351 1288 22 35 0 0 chr5 186715656 186715685 -16369847 + AT_rich Low_complexity Low_complexity 1 29 0 2140 117 3 16 chr5 186716171 186716487 -16369045 - AluSx SINE Alu 0 312 1 420 248 76 34 chr5 186716580 186716818 -16368714 - L1MC5 LINE L1 -84 7877 7630 365 271 105 49 chr5 186716845 186717111 -16368421 + HAL1b LINE L1 1002 1282 -66 430 296 66 62 chr5 186717279 186717505 -16368027 - MLT1I LTR MaLR -67 342 116 2279 104 0 7 chr5 186717748 186718047 -16367485 + AluSc SINE Alu 1 297 -12 1382 156 80 0 chr5 186718123 186718360 -16367172 + AluJb SINE Alu 42 297 -15 3867 20 0 0 chr5 186718620 186719067 -16366465 - L1PA2 LINE L1 0 6155 5709 394 281 51 63 chr5 186719396 186719730 -16365802 - L1ME4a LINE L1 -273 5848 5519 1973 119 17 13 chr5 186720079 186720381 -16365151 + AluSq SINE Alu 1 303 -10 647 293 161 20 chr5 186722073 186722482 -16363050 - LTR50 LTR ERVL 0 795 329 2113 177 43 26 chr5 186723839 186724258 -16361274 + MSTB LTR MaLR 1 426 0 376 311 17 17 chr5 186724284 186724403 -16361129 + MIR SINE MIR 73 191 -71 473 277 76 22 chr5 186725331 186725515 -16360017 - L2 LINE L2 -17 3296 3103 237 255 20 0 chr5 186725548 186725599 -16359933 - MER70B LTR ERVL -73 505 454 611 154 34 81 chr5 186725975 186726124 -16359408 - FLAM_C SINE Alu -1 142 1 1264 177 98 80 chr5 186726446 186726835 -16358697 + MSTD LTR MaLR 1 396 0 353 296 32 53 chr5 186726860 186727049 -16358483 + Charlie2 DNA MER1_type 104 288 -2494 367 223 99 66 chr5 186727186 186727307 -16358225 - L2 LINE L2 -8 3305 3181 708 234 10 15 chr5 186727372 186727569 -16357963 + Charlie2a DNA MER1_type 1467 1662 -1200 266 333 14 21 chr5 186727585 186727726 -16357806 + Charlie2a DNA MER1_type 2723 2862 0 1169 167 9 44 chr5 186727945 186728172 -16357360 - MER20 DNA MER1_type 0 219 1 198 208 0 0 chr5 186730354 186730407 -16355125 + GA-rich Low_complexity Low_complexity 2 54 0 270 271 83 21 chr5 186730422 186730518 -16355014 - MLT1K LTR MaLR -83 505 404 297 339 24 24 chr5 186730620 186730744 -16354788 - MLT1K LTR MaLR -355 233 110 387 273 40 0 chr5 186731359 186731458 -16354074 + MIR SINE MIR 45 147 -61 14189 134 35 7 chr5 186731527 186733878 -16351654 - Tigger1 DNA MER2_type 0 2418 2 1574 190 0 37 chr5 186734120 186734440 -16351092 - AluSx SINE Alu 0 309 1 1854 108 90 11 chr5 186734472 186734749 -16350783 + AluSq SINE Alu 1 299 -14 856 296 49 27 chr5 186734818 186735224 -16350308 - MLT2F LTR ERVL -245 418 4 386 230 75 26 chr5 186735340 186735484 -16350048 - L1MD3 LINE L1 0 8042 7895 228 189 0 0 chr5 186735580 186735617 -16349915 - Tigger1 DNA MER2_type -2345 73 37 1109 253 46 30 chr5 186735619 186736014 -16349518 - L1MC4 LINE L1 -196 7846 7446 996 189 0 0 chr5 186736014 186736229 -16349303 - AluSq SINE Alu 0 313 136 1139 240 102 0 chr5 186736352 186736656 -16348876 - MER58B DNA MER1_type -3 338 4 267 256 11 44 chr5 186739032 186739122 -16346410 - MIR3 SINE MIR -1 207 121 2111 97 0 23 chr5 186739347 186739646 -16345886 - AluY SINE Alu -19 292 1 2395 80 0 0 chr5 186740165 186740466 -16345066 - AluY SINE Alu 0 311 11 508 202 99 50 chr5 186740704 186740966 -16344566 + Charlie2 DNA MER1_type 2230 2504 -358 1282 199 67 3 chr5 186741102 186741414 -16344118 + LTR37A LTR ERV1 95 426 0 248 253 40 0 chr5 186741423 186741522 -16344010 + Charlie2 DNA MER1_type 2697 2799 -63 1604 183 6 16 chr5 186741528 186741637 -16343895 + L1MC1 LINE L1 5858 5967 -366 2078 103 3 0 chr5 186741637 186741919 -16343613 + AluSq SINE Alu 31 313 0 1604 183 6 16 chr5 186741919 186742126 -16343406 + L1MC1 LINE L1 5967 6171 -162 1062 209 216 48 chr5 186742133 186742224 -16343308 - MER39 LTR ERV1 -4 684 610 2420 68 3 0 chr5 186742224 186742520 -16343012 + AluSc SINE Alu 1 297 -12 1062 209 216 48 chr5 186742520 186742840 -16342692 - MER39 LTR ERV1 -78 610 223 228 235 20 0 chr5 186742878 186742929 -16342603 - MER39 LTR ERV1 -655 52 1 861 192 0 12 chr5 186742929 186743096 -16342436 + L1MC1 LINE L1 6169 6333 0 371 267 12 0 chr5 186743693 186743779 -16341753 - MIR SINE MIR -169 93 7 380 238 0 49 chr5 186743880 186744002 -16341530 + MIR SINE MIR 119 234 -28 304 291 47 0 chr5 186744196 186744282 -16341250 - LTR33 LTR ERVL -134 387 298 571 279 60 60 chr5 186744364 186744633 -16340899 - LTR33 LTR ERVL -252 269 1 2052 152 0 3 chr5 186745375 186745684 -16339848 - AluJb SINE Alu -4 308 1 409 266 98 35 chr5 186745818 186746021 -16339511 - L1MC4 LINE L1 -86 7956 7741 183 80 0 0 chr5 186746170 186746195 -16339337 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 285 271 75 0 chr5 186746220 186746353 -16339179 - L1MC5 LINE L1 -517 7444 7302 * 335 276 55 31 chr5 186746333 186746496 -16339036 - L1MC4a LINE L1 -397 7411 7245 587 214 145 23 chr5 186746675 186746952 -16338580 - L1MC4a LINE L1 -1019 6789 6608 221 268 42 0 chr5 186746952 186747041 -16338491 + (CAGAGA)n Simple_repeat Simple_repeat 1 92 0 2308 104 0 0 chr5 186747182 186747491 -16338041 - AluSc SINE Alu 0 309 1 1091 297 39 32 chr5 186747862 186748479 -16337053 - L1MC4a LINE L1 -1928 5880 5260 1388 211 4 8 chr5 186748675 186748941 -16336591 - AluJo SINE Alu -45 267 3 271 287 42 63 chr5 186748958 186749155 -16336377 - L1MC4a LINE L1 -1137 5009 4810 22 56 0 0 chr5 186749637 186749673 -16335859 + AT_rich Low_complexity Low_complexity 1 36 0 300 227 15 0 chr5 186749682 186749748 -16335784 + L1MCa LINE L1 1998 2064 -4362 21 0 0 0 chr5 186750393 186750414 -16335118 + AT_rich Low_complexity Low_complexity 1 21 0 259 200 136 64 chr5 186751009 186751134 -16334398 - MIR SINE MIR -57 205 72 1324 147 0 36 chr5 186752073 186752297 -16333235 - AluSg/x SINE Alu -19 293 78 505 337 6 6 chr5 186752707 186752879 -16332653 + MIR SINE MIR 2 173 -89 1239 212 110 42 chr5 186753612 186754050 -16331482 + MLT1C LTR MaLR 6 465 -2 1479 217 22 28 chr5 186755431 186755791 -16329741 - MLT1C LTR MaLR 0 467 110 1189 262 101 24 chr5 186757415 186757912 -16327620 - L1ME3A LINE L1 -6 6164 5630 2179 108 0 0 chr5 186758628 186758915 -16326617 - AluSg SINE Alu -23 287 1 301 187 36 54 chr5 186761186 186761352 -16324180 + (TTATA)n Simple_repeat Simple_repeat 4 166 0 350 351 15 23 chr5 186761920 186762089 -16323443 - MIR3 SINE MIR -43 165 39 23 68 0 0 chr5 186762503 186762547 -16322985 + AT_rich Low_complexity Low_complexity 1 44 0 944 239 9 22 chr5 186762673 186762895 -16322637 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr5 186762897 186762918 -16322614 + AT_rich Low_complexity Low_complexity 1 21 0 303 321 52 8 chr5 186763070 186763204 -16322328 + MIR SINE MIR 56 195 -67 2255 111 0 0 chr5 186763373 186763670 -16321862 - AluY SINE Alu -14 297 1 2296 95 3 13 chr5 186764266 186764582 -16320950 - AluSq SINE Alu 0 313 1 2153 100 7 10 chr5 186765748 186766048 -16319484 + AluSc SINE Alu 5 303 -6 247 328 118 17 chr5 186766653 186766772 -16318760 + L2 LINE L2 3142 3272 0 21 36 0 0 chr5 186767857 186767885 -16317647 + AT_rich Low_complexity Low_complexity 1 28 0 470 283 0 8 chr5 186769374 186769494 -16316038 - LTR28 LTR ERV1 0 1020 902 1966 182 93 124 chr5 186769575 186770338 -16315194 - LTR1B LTR ERV1 -81 745 7 24 32 0 0 chr5 186770485 186770516 -16315016 + AT_rich Low_complexity Low_complexity 1 31 0 1971 132 30 3 chr5 186770890 186771194 -16314338 - AluSx SINE Alu 0 312 1 407 302 90 56 chr5 186772336 186772604 -16312928 + L3 LINE CR1 1295 1571 -6 204 62 42 42 chr5 186773382 186773430 -16312102 + (TTTTG)n Simple_repeat Simple_repeat 4 51 0 2332 97 3 3 chr5 186773465 186773774 -16311758 + AluSc SINE Alu 1 309 0 418 271 9 9 chr5 186774994 186775101 -16310431 - MLT1I LTR MaLR -7 402 296 183 42 0 0 chr5 186775148 186775172 -16310360 + (TG)n Simple_repeat Simple_repeat 2 25 0 2231 108 0 20 chr5 186775670 186775976 -16309556 + AluSg SINE Alu 1 300 -10 2196 103 3 16 chr5 186776848 186777160 -16308372 - AluSg1 SINE Alu -1 308 1 285 250 80 11 chr5 186777163 186777251 -16308281 - MER103 DNA DNA -69 97 4 605 236 28 39 chr5 186777690 186777872 -16307660 - MIR SINE MIR -82 180 1 416 284 37 66 chr5 186778782 186779025 -16306507 + MIR SINE MIR 25 260 -2 22 35 0 0 chr5 186779927 186779956 -16305576 + AT_rich Low_complexity Low_complexity 1 29 0 297 0 0 0 chr5 186782134 186782167 -16303365 + (CA)n Simple_repeat Simple_repeat 2 34 0 29 0 0 0 chr5 186783295 186783324 -16302208 + AT_rich Low_complexity Low_complexity 1 29 0 1866 144 0 17 chr5 186783324 186783616 -16301916 - AluSx SINE Alu -20 292 6 341 292 75 31 chr5 186783674 186783835 -16301697 + L1ME4a LINE L1 5950 6117 -4 195 42 0 0 chr5 186783838 186783862 -16301670 + (GGAA)n Simple_repeat Simple_repeat 2 25 0 194 266 31 31 chr5 186784417 186784481 -16301051 + MER5A DNA MER1_type 34 97 -92 1829 237 70 72 chr5 186784780 186785153 -16300379 - L1ME3A LINE L1 -3 6167 5795 2259 101 3 0 chr5 186785153 186785450 -16300082 - AluSx SINE Alu -14 298 1 312 27 0 0 chr5 186785459 186785496 -16300036 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 1829 237 70 72 chr5 186785496 186785761 -16299771 - L1ME3A LINE L1 -383 5787 5523 216 0 0 0 chr5 186785761 186785785 -16299747 + (TG)n Simple_repeat Simple_repeat 2 25 0 1829 237 70 72 chr5 186785785 186785843 -16299689 - L1ME3A LINE L1 -647 5523 5459 1378 138 58 0 chr5 186785843 186786103 -16299429 - L1MA1 LINE L1 0 6302 6028 1829 237 70 72 chr5 186786103 186786149 -16299383 - L1ME3A LINE L1 -711 5459 5414 237 373 24 16 chr5 186786188 186786314 -16299218 - MER5B DNA MER1_type -51 127 1 183 240 98 115 chr5 186787809 186787992 -16297540 - L2 LINE L2 -58 3255 3076 192 355 94 14 chr5 186788150 186788288 -16297244 + L2 LINE L2 2201 2349 -965 1106 147 0 6 chr5 186788340 186788510 -16297022 - AluSg/x SINE Alu -10 302 134 2089 128 0 7 chr5 186788510 186788806 -16296726 - AluSx SINE Alu -18 294 1 269 226 31 132 chr5 186788995 186789154 -16296378 - L2 LINE L2 -81 3232 3090 4586 141 51 10 chr5 186789340 186790125 -16295407 + LTR1B LTR ERV1 8 824 -2 29 28 0 0 chr5 186790649 186790685 -16294847 + AT_rich Low_complexity Low_complexity 1 36 0 197 304 168 32 chr5 186790981 186791106 -16294426 + MIR SINE MIR 14 155 -107 414 118 24 12 chr5 186792249 186792334 -16293198 + CT-rich Low_complexity Low_complexity 3 88 0 673 306 99 34 chr5 186792718 186793333 -16292199 - L1ME2 LINE L1 -327 6231 5649 677 245 27 11 chr5 186793735 186793919 -16291613 - MER3 DNA MER1_type -21 188 2 252 300 129 21 chr5 186794134 186794514 -16291018 - L1ME2 LINE L1 -1539 5001 4581 716 266 103 72 chr5 186794620 186794708 -16290824 - L1ME2 LINE L1 -2129 4411 4327 1225 195 114 26 chr5 186794708 186794980 -16290552 + AluJo SINE Alu 2 297 -5 716 266 103 72 chr5 186794980 186795099 -16290433 - L1ME2 LINE L1 -2213 4327 4213 2099 115 0 20 chr5 186795099 186795404 -16290128 - AluSq SINE Alu -14 299 1 716 266 103 72 chr5 186795404 186796910 -16288622 - L1ME2 LINE L1 -2327 4213 2644 25 31 0 0 chr5 186797082 186797114 -16288418 + AT_rich Low_complexity Low_complexity 1 32 0 358 297 108 22 chr5 186797115 186797300 -16288232 - L2 LINE L2 0 3313 3113 192 40 0 0 chr5 186798090 186798115 -16287417 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 8392 31 0 0 chr5 186798174 186799956 -16285576 - L1PA3 LINE L1 0 6155 4384 293 285 92 54 chr5 186801896 186802321 -16283211 - L1ME2 LINE L1 -4081 2640 2200 451 300 41 10 chr5 186802337 186802630 -16282902 - L1ME2 LINE L1 -4564 1976 1799 896 308 55 32 chr5 186802785 186803133 -16282399 + MLT1E LTR MaLR 238 593 0 360 311 174 37 chr5 186803140 186803468 -16282064 - L1ME2 LINE L1 -4981 1549 1177 2020 126 0 3 chr5 186803975 186804299 -16281233 - AluSq SINE Alu 0 323 1 415 336 106 0 chr5 186804455 186804672 -16280860 + MIR SINE MIR 8 247 -15 227 263 0 0 chr5 186807366 186807423 -16278109 - LTR40c LTR ERVL -55 410 354 2208 97 30 0 chr5 186807425 186807724 -16277808 - AluSc SINE Alu -1 308 1 1038 283 48 0 chr5 186807794 186808066 -16277466 - LTR40a LTR ERVL -234 285 1 216 277 43 43 chr5 186808192 186808286 -16277246 - MIR SINE MIR -110 152 59 2112 131 3 6 chr5 186808557 186808870 -16276662 - AluSq SINE Alu -1 312 1 531 194 42 14 chr5 186809329 186809473 -16276059 + MER103 DNA DNA 4 151 -15 677 346 49 20 chr5 186809975 186810383 -16275149 + L1MEc LINE L1 36 455 -5941 303 274 43 32 chr5 186810712 186810898 -16274634 + L1MEc LINE L1 678 865 -5531 2076 195 81 11 chr5 186810936 186811428 -16274104 - LTR27 LTR ERV1 0 501 3 1710 246 112 63 chr5 186811433 186812629 -16272903 + L1MEc LINE L1 870 2123 -4273 5748 122 17 8 chr5 186814912 186815807 -16269725 + L1MA3 LINE L1 5374 6276 -29 367 336 55 44 chr5 186816045 186816411 -16269121 - MLT1L LTR MaLR -237 378 9 2764 270 58 18 chr5 186817772 186819007 -16266525 + L1MEc LINE L1 2224 3507 -2708 21 36 0 0 chr5 186819091 186819119 -16266413 + AT_rich Low_complexity Low_complexity 1 28 0 198 303 59 46 chr5 186819709 186819861 -16265671 + L2 LINE L2 1850 2003 -1311 258 192 0 0 chr5 186819866 186819918 -16265614 + (TG)n Simple_repeat Simple_repeat 2 53 0 413 331 95 34 chr5 186819931 186819950 -16265582 + L2 LINE L2 2035 2051 -1263 1773 156 0 7 chr5 186819950 186820225 -16265307 - AluSx SINE Alu -39 273 1 1803 202 58 11 chr5 186820232 186820678 -16264854 - MLT1C LTR MaLR 0 467 1 413 331 95 34 chr5 186820678 186820946 -16264586 + L2 LINE L2 2056 2348 -966 445 273 146 10 chr5 186821076 186821281 -16264251 + MIR SINE MIR 4 236 -26 309 391 72 8 chr5 186821550 186821785 -16263747 + L2 LINE L2 2812 3061 -211 304 293 8 106 chr5 186821836 186821959 -16263573 - L2 LINE L2 -3 3310 3200 212 333 0 0 chr5 186822368 186822437 -16263095 + MIR SINE MIR 82 150 -112 241 311 24 24 chr5 186823254 186823418 -16262114 + L1MCc LINE L1 17 180 -6243 746 255 37 80 chr5 186823771 186823953 -16261579 + L1MCc LINE L1 1129 1317 -5427 356 0 23 0 chr5 186823953 186823997 -16261535 + (TA)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr5 186823996 186824024 -16261508 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 746 255 37 80 chr5 186823997 186824428 -16261104 + L1MCc LINE L1 1317 1847 -4897 2072 191 11 3 chr5 186824444 186824822 -16260710 - MLT1B LTR MaLR -1 389 9 833 275 72 64 chr5 186824831 186824957 -16260575 + L1MCc LINE L1 1939 2062 -5060 2188 182 34 10 chr5 186824957 186825375 -16260157 - MSTA LTR MaLR 0 428 1 833 275 72 64 chr5 186825375 186825869 -16259663 + L1MCc LINE L1 2062 2564 -4558 425 316 44 0 chr5 186826954 186827112 -16258420 + MIR3 SINE MIR 33 197 -11 1206 36 0 0 chr5 186828467 186828605 -16256927 - AluY SINE Alu -15 296 159 261 0 0 0 chr5 186828607 186828636 -16256896 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 280 280 75 28 chr5 186828660 186828767 -16256765 + MIR SINE MIR 11 122 -140 490 353 70 9 chr5 186829026 186829479 -16256053 - MERVL LTR ERVL -2856 2140 1711 1290 161 0 0 chr5 186829529 186829734 -16255798 + MER2 DNA MER2_type 5 209 -136 660 270 105 5 chr5 186829873 186830073 -16255459 - MER58A DNA MER1_type -3 221 2 677 202 0 23 chr5 186830602 186830731 -16254801 + FLAM_A SINE Alu 1 126 -7 324 171 143 9 chr5 186831671 186831776 -16253756 - LTR33A LTR ERVL 0 523 405 263 355 65 27 chr5 186832019 186832205 -16253327 - LTR50 LTR ERVL -588 207 15 2882 158 33 0 chr5 186832993 186833473 -16252059 - MER41E LTR ERV1 -16 496 1 22 56 0 0 chr5 186833726 186833762 -16251770 + AT_rich Low_complexity Low_complexity 1 36 0 593 205 18 0 chr5 186833823 186833935 -16251597 - MLT1C LTR MaLR 0 467 354 260 193 35 0 chr5 186833939 186833996 -16251536 - MLT1C LTR MaLR -408 59 1 397 275 92 30 chr5 186836052 186836183 -16249349 + MER97c DNA MER1_type? 21 159 -931 2390 189 22 15 chr5 186836186 186836645 -16248887 + MLT1C LTR MaLR 6 467 0 21 0 0 0 chr5 186837314 186837335 -16248197 + AT_rich Low_complexity Low_complexity 1 21 0 286 179 0 26 chr5 186838282 186838360 -16247172 + GA-rich Low_complexity Low_complexity 1 76 0 21 57 0 0 chr5 186838379 186838414 -16247118 + AT_rich Low_complexity Low_complexity 1 35 0 1628 81 4 43 chr5 186838448 186838683 -16246849 + AluSx SINE Alu 1 226 -86 261 237 40 13 chr5 186838940 186839016 -16246516 + CT-rich Low_complexity Low_complexity 1 78 0 2127 111 0 63 chr5 186839024 186839375 -16246157 - AluSx SINE Alu 0 330 1 24 0 0 0 chr5 186839751 186839775 -16245757 + AT_rich Low_complexity Low_complexity 1 24 0 294 258 65 65 chr5 186840026 186840150 -16245382 + MER104 DNA Tc2 1 124 -56 28 61 0 0 chr5 186840226 186840275 -16245257 + AT_rich Low_complexity Low_complexity 1 49 0 26 50 0 0 chr5 186840605 186840645 -16244887 + AT_rich Low_complexity Low_complexity 1 40 0 475 282 82 23 chr5 186840792 186841012 -16244520 - L2 LINE L2 -39 3274 3042 2099 111 3 3 chr5 186842286 186842575 -16242957 - AluSx SINE Alu -22 290 2 41 48 0 0 chr5 186842743 186842805 -16242727 + AT_rich Low_complexity Low_complexity 1 62 0 224 315 105 26 chr5 186843179 186843318 -16242214 - MIR SINE MIR -54 154 6 216 219 0 31 chr5 186843397 186843461 -16242071 + CT-rich Low_complexity Low_complexity 3 64 0 560 242 87 0 chr5 186843792 186843953 -16241579 + MER96 DNA MER1_type 1 175 0 216 0 0 0 chr5 186843968 186843992 -16241540 + (T)n Simple_repeat Simple_repeat 1 24 0 225 0 0 0 chr5 186845298 186845323 -16240209 + (AAATG)n Simple_repeat Simple_repeat 4 28 0 202 343 130 29 chr5 186846126 186846333 -16239199 + L2 LINE L2 3045 3272 0 21 57 0 0 chr5 186846981 186847016 -16238516 + AT_rich Low_complexity Low_complexity 1 35 0 369 0 0 0 chr5 186847153 186847194 -16238338 + (TG)n Simple_repeat Simple_repeat 2 42 0 389 352 142 5 chr5 186848227 186848446 -16237086 + MIR SINE MIR 11 259 -3 197 132 26 0 chr5 186849228 186849266 -16236266 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 511 270 116 75 chr5 186849640 186850106 -16235426 + L2 LINE L2 2829 3313 0 209 296 41 128 chr5 186850586 186850829 -16234703 + L2 LINE L2 2978 3199 -73 181 220 20 20 chr5 186852125 186852175 -16233357 - L2 LINE L2 0 3313 3264 4504 183 26 26 chr5 186853291 186854714 -16230818 - L1MB3 LINE L1 -4 6179 4761 29 0 0 0 chr5 186854850 186854879 -16230653 + AT_rich Low_complexity Low_complexity 1 29 0 2260 201 85 25 chr5 186855093 186855681 -16229851 - LTR48B LTR ERV1 0 644 22 238 132 0 0 chr5 186855665 186855703 -16229829 - MER34C LTR ERV1 -512 73 36 * 400 319 30 24 chr5 186855752 186855918 -16229614 - MLT1H LTR MaLR -338 211 45 2091 129 0 10 chr5 186856265 186856575 -16228957 - AluSc SINE Alu 0 309 3 2595 139 25 11 chr5 186856588 186857028 -16228504 + Tigger2 DNA MER2_type 2273 2718 0 451 275 76 12 chr5 186857037 186857208 -16228324 - MIR SINE MIR -2 260 79 220 208 0 0 chr5 186857551 186857604 -16227928 + T-rich Low_complexity Low_complexity 1 53 0 8829 222 46 0 chr5 186857859 186860801 -16224731 + L1PA16 LINE L1 3160 6166 0 183 204 0 0 chr5 186861669 186861713 -16223819 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 359 18 77 chr5 186862506 186862676 -16222856 + L2 LINE L2 2995 3154 -118 1313 196 77 24 chr5 186863191 186863748 -16221784 - MLT1E1 LTR MaLR 0 654 1 296 182 0 30 chr5 186863753 186863819 -16221713 - MER112 DNA MER1_type -136 124 61 305 217 48 24 chr5 186863835 186863918 -16221614 - MER112 DNA MER1_type -175 85 1 3543 92 56 0 chr5 186867859 186868380 -16217152 + HERVH LTR ERV1 3166 3715 -3998 1828 143 74 17 chr5 186868390 186868797 -16216735 + HERVH LTR ERV1 7277 7706 -7 180 0 0 0 chr5 186869041 186869061 -16216471 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 183 156 0 0 chr5 186869252 186869284 -16216248 + A-rich Low_complexity Low_complexity 2 33 0 198 381 69 18 chr5 186869757 186869975 -16215557 - L2 LINE L2 -237 3035 2807 475 60 12 84 chr5 186871439 186871453 -16214079 + MSTB1 LTR MaLR 354 367 -65 2020 124 41 0 chr5 186871453 186871743 -16213789 - AluSx SINE Alu -10 302 1 475 60 12 84 chr5 186871743 186871811 -16213721 + MSTB1 LTR MaLR 367 430 -2 2441 218 26 65 chr5 186871811 186872178 -16213354 + MST-int LTR MaLR 3 330 -1321 1917 112 0 7 chr5 186872178 186872454 -16213078 - AluSq SINE Alu -39 274 1 2441 218 26 65 chr5 186872454 186872789 -16212743 + MST-int LTR MaLR 330 677 -974 3529 123 28 19 chr5 186872947 186873770 -16211762 - HERVH LTR ERV1 -6695 1018 1 2507 85 125 5 chr5 186873772 186874172 -16211360 - LTR7 LTR ERV1 -2 448 1 216 0 0 0 chr5 186874186 186874210 -16211322 + (A)n Simple_repeat Simple_repeat 1 24 0 23 33 0 0 chr5 186874503 186874533 -16210999 + AT_rich Low_complexity Low_complexity 1 30 0 251 260 94 69 chr5 186874533 186874894 -16210638 + L1M4 LINE L1 3392 3761 -2385 390 268 49 32 chr5 186874997 186875120 -16210412 - MER5A DNA MER1_type -2 187 63 269 120 40 0 chr5 186875120 186875170 -16210362 + CT-rich Low_complexity Low_complexity 3 54 0 1136 88 6 6 chr5 186875274 186875444 -16210088 + HERVH LTR ERV1 3546 3715 -3998 2414 124 38 12 chr5 186875454 186875880 -16209652 + HERVH LTR ERV1 7277 7713 0 2454 77 138 5 chr5 186875880 186876271 -16209261 + LTR7 LTR ERV1 1 443 -7 1912 104 41 0 chr5 186876273 186876542 -16208990 - AluSc SINE Alu -29 280 1 12304 90 3 19 chr5 186876799 186878597 -16206935 - HERVH LTR ERV1 -4912 2801 1034 188 256 0 0 chr5 186878982 186879021 -16206511 + L2 LINE L2 2694 2732 -582 22 35 0 0 chr5 186879022 186879051 -16206481 + AT_rich Low_complexity Low_complexity 1 29 0 2025 144 0 3 chr5 186879067 186879366 -16206166 + AluSx SINE Alu 1 298 -14 2346 105 0 0 chr5 186880144 186880448 -16205084 - AluSx SINE Alu -8 304 1 468 0 0 0 chr5 186881304 186881356 -16204176 + (TGGA)n Simple_repeat Simple_repeat 2 53 0 287 279 292 6 chr5 186881878 186882039 -16203493 + MIR SINE MIR 53 259 -3 23 33 0 0 chr5 186883465 186883495 -16202037 + AT_rich Low_complexity Low_complexity 1 30 0 3028 151 6 4 chr5 186884167 186884684 -16200848 + L1MB2 LINE L1 5654 6171 0 22 35 0 0 chr5 186884858 186884887 -16200645 + AT_rich Low_complexity Low_complexity 1 29 0 200 146 0 21 chr5 186884922 186884970 -16200562 + (TA)n Simple_repeat Simple_repeat 1 47 0 184 358 44 29 chr5 186887282 186887419 -16198113 + L2 LINE L2 2871 3009 -263 23 92 0 0 chr5 186887779 186887844 -16197688 + AT_rich Low_complexity Low_complexity 1 65 0 2150 125 3 0 chr5 186887931 186888236 -16197296 - AluSx SINE Alu -6 306 1 324 193 28 0 chr5 186888970 186889079 -16196453 + (TA)n Simple_repeat Simple_repeat 1 112 0 297 283 78 33 chr5 186889317 186889497 -16196035 + MLT1K LTR MaLR 330 517 -71 197 262 29 122 chr5 186889568 186889740 -16195792 - MER5B DNA MER1_type -5 173 18 272 297 0 0 chr5 186890226 186890300 -16195232 + GA-rich Low_complexity Low_complexity 3 76 0 235 385 86 0 chr5 186890401 186890518 -16195014 - L2 LINE L2 -4 3268 3142 801 273 88 69 chr5 186890989 186891728 -16193804 - L1MEc LINE L1 -4603 1793 1041 2772 272 43 18 chr5 186891792 186892672 -16192860 - L1MEc LINE L1 -5458 938 37 2353 52 3 3 chr5 186893138 186893429 -16192103 - AluY SINE Alu -20 291 1 2455 62 0 3 chr5 186893682 186893988 -16191544 + AluY SINE Alu 1 305 -6 30 0 0 0 chr5 186894107 186894137 -16191395 + AT_rich Low_complexity Low_complexity 1 30 0 214 24 0 73 chr5 186896717 186896758 -16188774 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr5 186898273 186898294 -16187238 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 186898554 186898603 -16186929 + AT_rich Low_complexity Low_complexity 1 49 0 315 0 0 0 chr5 186898631 186898666 -16186866 + (CA)n Simple_repeat Simple_repeat 2 36 0 2102 104 24 0 chr5 186898776 186899065 -16186467 + AluSc SINE Alu 3 298 -11 722 220 22 95 chr5 186899250 186899482 -16186050 - MIR SINE MIR -24 238 24 541 309 91 11 chr5 186899491 186899666 -16185866 - MER5A DNA MER1_type 0 189 1 2122 107 3 17 chr5 186901192 186901490 -16184042 + AluSq SINE Alu 1 294 -19 200 139 28 0 chr5 186902273 186902309 -16183223 + (TAA)n Simple_repeat Simple_repeat 2 38 0 280 280 83 76 chr5 186903251 186903408 -16182124 + MIR SINE MIR 32 189 -73 218 274 16 16 chr5 186903546 186903608 -16181924 + MIR SINE MIR 16 77 -131 1913 132 41 3 chr5 186904020 186904315 -16181217 - AluSg SINE Alu 0 310 5 24 0 0 0 chr5 186906228 186906252 -16179280 + AT_rich Low_complexity Low_complexity 1 24 0 2252 72 4 0 chr5 186906415 186906719 -16178813 - AluY SINE Alu 0 305 1 428 258 6 51 chr5 186907029 186907207 -16178325 - L1ME3A LINE L1 -219 5951 5782 401 289 33 22 chr5 186907220 186907400 -16178132 - L1ME3A LINE L1 -449 5672 5491 231 36 0 0 chr5 186907606 186907634 -16177898 + (A)n Simple_repeat Simple_repeat 1 28 0 25 51 0 0 chr5 186908089 186908128 -16177404 + AT_rich Low_complexity Low_complexity 1 39 0 269 246 14 0 chr5 186908608 186908677 -16176855 + L2 LINE L2 3243 3312 -1 180 97 0 0 chr5 186908866 186908897 -16176635 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 235 253 58 35 chr5 186909326 186909413 -16176119 - MLT1K LTR MaLR -340 248 160 435 236 173 78 chr5 186909900 186910091 -16175441 - MIR SINE MIR 0 262 54 1393 131 0 0 chr5 186910384 186910582 -16174950 + AluSg/x SINE Alu 105 302 -10 423 236 0 0 chr5 186912600 186912689 -16172843 + MIR SINE MIR 72 160 -102 253 266 0 0 chr5 186913065 186913129 -16172403 - MIR SINE MIR -22 240 177 1888 96 8 0 chr5 186913353 186913603 -16171929 + AluSq SINE Alu 58 309 -4 232 261 43 11 chr5 186913660 186913752 -16171780 + L1M4 LINE L1 4734 4828 -1318 380 286 94 41 chr5 186913847 186914092 -16171440 + L1M4 LINE L1 4889 5146 -1000 3047 239 79 66 chr5 186914426 186916520 -16169012 - L1M4c LINE L1 -4566 2080 2 1386 194 43 4 chr5 186916549 186916828 -16168704 - AluJo SINE Alu -21 291 2 208 153 69 14 chr5 186916854 186916926 -16168606 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 2071 124 0 0 chr5 186917703 186918009 -16167523 + AluSx SINE Alu 1 306 0 226 286 90 38 chr5 186918250 186918383 -16167149 + L3 LINE CR1 277 416 -1161 315 319 59 6 chr5 186918565 186918734 -16166798 - LTR16C LTR ERVL -75 416 239 27 29 0 0 chr5 186919251 186919285 -16166247 + AT_rich Low_complexity Low_complexity 1 34 0 1435 266 33 53 chr5 186919692 186920279 -16165253 + L2 LINE L2 2726 3298 -15 329 336 43 52 chr5 186920522 186920733 -16164799 - L2 LINE L2 -411 2903 2695 208 350 114 0 chr5 186920998 186921121 -16164411 + L3 LINE CR1 1179 1315 -262 1672 209 82 58 chr5 186921184 186921686 -16163846 - MLT1F LTR MaLR -16 526 13 244 368 18 9 chr5 186921699 186921813 -16163719 + L3 LINE CR1 1391 1505 -72 37 0 0 0 chr5 186922264 186922301 -16163231 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 186924342 186924372 -16161160 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr5 186925013 186925040 -16160492 + (ATTG)n Simple_repeat Simple_repeat 4 30 0 2240 84 0 3 chr5 186925040 186925324 -16160208 - AluSq SINE Alu -30 283 1 1041 253 30 48 chr5 186925590 186926028 -16159504 - MLT1C LTR MaLR 0 467 38 273 274 100 90 chr5 186927285 186927514 -16158018 - MLT1J LTR MaLR -67 444 210 2197 87 42 0 chr5 186927514 186927802 -16157730 - AluSx SINE Alu -12 300 1 273 274 100 90 chr5 186927802 186927882 -16157650 - MLT1J LTR MaLR -301 210 132 519 338 6 6 chr5 186929157 186929317 -16156215 + MIR SINE MIR 5 164 -98 473 311 127 38 chr5 186929441 186929670 -16155862 + L2 LINE L2 2684 2891 -422 3996 127 6 9 chr5 186929670 186930307 -16155225 + MER41B LTR ERV1 1 635 0 473 311 127 38 chr5 186930307 186930652 -16154880 + L2 LINE L2 2891 3313 0 234 229 115 62 chr5 186931154 186931250 -16154282 + MIR SINE MIR 162 262 0 1483 143 42 49 chr5 186932145 186932431 -16153101 + AluJo SINE Alu 1 284 -28 1357 217 8 46 chr5 186932499 186932867 -16152665 - MER4D LTR ERV1 0 903 550 1370 150 7 116 chr5 186932938 186933256 -16152276 - MER49 LTR ERV1 -638 285 1 2476 74 0 3 chr5 186934377 186934686 -16150846 - AluY SINE Alu -3 308 1 6076 127 16 11 chr5 186934763 186935795 -16149737 + L1MA3 LINE L1 5268 6305 0 238 295 21 21 chr5 186937678 186937773 -16147759 - MIR SINE MIR -39 223 129 2084 135 3 3 chr5 186937984 186938287 -16147245 - AluSx SINE Alu -9 303 1 328 254 118 0 chr5 186939785 186939895 -16145637 - L2 LINE L2 -241 3072 2950 2350 105 0 6 chr5 186941098 186941411 -16144121 - AluSp SINE Alu -2 311 1 184 318 152 15 chr5 186942283 186942415 -16143117 + L2 LINE L2 3123 3272 0 1714 224 70 51 chr5 186942484 186942978 -16142554 + MER54A LTR ERVL 80 864 -37 2265 104 0 0 chr5 186942978 186943265 -16142267 + AluSc SINE Alu 1 287 -22 1714 224 70 51 chr5 186943265 186943304 -16142228 + MER54A LTR ERVL 864 901 0 213 163 0 0 chr5 186943553 186943602 -16141930 + CT-rich Low_complexity Low_complexity 1 49 0 791 155 36 167 chr5 186943699 186943951 -16141581 + MER20 DNA MER1_type 1 219 0 230 301 21 86 chr5 186943953 186944046 -16141486 + L2 LINE L2 3150 3236 -36 338 103 0 170 chr5 186944046 186944351 -16141181 + (TA)n Simple_repeat Simple_repeat 1 253 0 * 487 135 5 150 chr5 186944252 186944554 -16140978 + (TATATG)n Simple_repeat Simple_repeat 1 258 0 183 277 0 0 chr5 186944581 186944646 -16140886 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 384 22 0 0 chr5 186945474 186945519 -16140013 + (TA)n Simple_repeat Simple_repeat 2 46 0 2250 97 0 3 chr5 186945693 186945992 -16139540 - AluY SINE Alu -13 298 1 708 214 0 19 chr5 186946418 186946572 -16138960 + Tigger7 DNA MER2_type 2 152 -2335 525 257 14 7 chr5 186946588 186946728 -16138804 - MLT1I LTR MaLR -69 340 200 1197 214 104 0 chr5 186946767 186947084 -16138448 - L1MC4 LINE L1 -370 7672 7323 1658 115 4 0 chr5 186947089 186947341 -16138191 - L1PB1 LINE L1 -39 6112 5860 1026 232 47 83 chr5 186947353 186947775 -16137757 - L1MC4 LINE L1 -1167 6875 6469 282 273 121 80 chr5 186948075 186948464 -16137068 - L1M4 LINE L1 -988 5158 4754 790 251 35 0 chr5 186948469 186948640 -16136892 - MER45A DNA AcHobo -1 177 1 1691 206 38 29 chr5 186948819 186949271 -16136261 - MLT1C LTR MaLR -8 459 4 848 198 59 13 chr5 186949374 186949413 -16136119 - L1MA9 LINE L1 -40 6272 6236 1828 163 42 9 chr5 186949413 186949750 -16135782 + MER7A DNA MER2_type 1 346 0 387 0 0 0 chr5 186949751 186949794 -16135738 + (TA)n Simple_repeat Simple_repeat 1 43 0 848 198 59 13 chr5 186949794 186949989 -16135543 - L1MA9 LINE L1 -75 6237 6025 1271 174 74 0 chr5 186949990 186950232 -16135300 - AluJb SINE Alu -52 260 1 363 187 0 0 chr5 186950248 186950323 -16135209 - L1MA9 LINE L1 -377 5935 5861 400 115 0 0 chr5 186950325 186950386 -16135146 + L1MB1 LINE L1 5818 5878 -311 194 375 147 7 chr5 186950751 186950887 -16134645 + MIR SINE MIR 10 164 -98 284 281 0 24 chr5 186951095 186951177 -16134355 + L2 LINE L2 3233 3312 -1 * 529 271 141 66 chr5 186951168 186951344 -16134188 - L2 LINE L2 -75 3238 3077 2332 92 3 25 chr5 186951344 186951660 -16133872 + AluSp SINE Alu 1 309 -4 529 271 141 66 chr5 186951660 186951830 -16133702 - L2 LINE L2 -236 3077 2866 585 244 87 29 chr5 186952005 186952177 -16133355 + MER5A DNA MER1_type 8 189 0 426 263 164 13 chr5 186952183 186952335 -16133197 - MER5A DNA MER1_type 0 189 15 1104 186 103 4 chr5 186952354 186952607 -16132925 - MER58B DNA MER1_type -8 333 56 185 253 60 60 chr5 186952611 186952694 -16132838 + L2 LINE L2 3138 3220 -52 22 0 0 0 chr5 186952794 186952816 -16132716 + AT_rich Low_complexity Low_complexity 1 22 0 904 300 60 22 chr5 186952877 186953244 -16132288 + L3 LINE CR1 1184 1564 -13 1525 117 0 0 chr5 186953244 186953449 -16132083 - AluSc SINE Alu 0 309 105 3016 71 0 33 chr5 186953449 186953902 -16131630 - MER11A LTR ERVK -1 1265 828 3802 90 33 18 chr5 186953902 186954502 -16131030 - MER11A LTR ERVK -657 609 1 830 108 0 0 chr5 186954502 186954613 -16130919 - AluSc SINE Alu -198 111 1 231 314 72 59 chr5 186954649 186954802 -16130730 + L2 LINE L2 2600 2754 -560 295 323 192 50 chr5 186955196 186955555 -16129977 + L2 LINE L2 2807 3216 -97 327 104 0 0 chr5 186955886 186955934 -16129598 + (T)n Simple_repeat Simple_repeat 1 48 0 180 0 0 0 chr5 186956123 186956143 -16129389 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 265 293 184 7 chr5 186957011 186957158 -16128374 + MIR SINE MIR 14 186 -76 30 45 0 0 chr5 186958012 186958056 -16127476 + AT_rich Low_complexity Low_complexity 1 44 0 2038 105 16 53 chr5 186958521 186958844 -16126688 - AluSq SINE Alu -2 311 1 381 43 0 0 chr5 186960446 186960493 -16125039 + (CA)n Simple_repeat Simple_repeat 2 48 0 267 152 0 0 chr5 186960847 186960893 -16124639 + T-rich Low_complexity Low_complexity 1 46 0 240 311 27 0 chr5 186961862 186961936 -16123596 + MER58B DNA MER1_type 1 76 -265 260 222 14 0 chr5 186961950 186962022 -16123510 + GA-rich Low_complexity Low_complexity 3 75 0 383 158 33 20 chr5 186962079 186962179 -16123353 + MER58B DNA MER1_type 106 341 0 257 281 11 0 chr5 186962522 186962611 -16122921 - MER113 DNA MER1_type? -429 92 3 302 227 92 71 chr5 186962715 186962856 -16122676 - L1ME4a LINE L1 -4 6117 5974 262 312 58 29 chr5 186965299 186965437 -16120095 + L2 LINE L2 3170 3311 -2 340 321 18 9 chr5 186965576 186965685 -16119847 - MIR SINE MIR -145 117 8 1119 196 75 49 chr5 186965766 186966129 -16119403 + MLT1A1 LTR MaLR 1 365 0 365 159 75 28 chr5 186966760 186966867 -16118665 + MER103 DNA DNA 3 114 -52 629 318 80 4 chr5 186967963 186968202 -16117330 + MIR SINE MIR 6 262 0 632 214 0 38 chr5 186969118 186969249 -16116283 - L2 LINE L2 0 3313 3188 234 182 61 30 chr5 186969408 186969474 -16116058 - LTR40a LTR ERVL -76 443 376 425 179 145 68 chr5 186969738 186969760 -16115772 + L2 LINE L2 3186 3205 -108 2319 103 0 0 chr5 186969760 186970060 -16115472 + AluY SINE Alu 1 300 -11 425 179 145 68 chr5 186970060 186970154 -16115378 + L2 LINE L2 3205 3311 -2 212 162 0 0 chr5 186970157 186970194 -16115338 + (ATG)n Simple_repeat Simple_repeat 2 38 0 268 301 77 48 chr5 186971103 186971375 -16114157 - MLT1L LTR MaLR -313 302 23 183 346 79 40 chr5 186971555 186971656 -16113876 - MIR SINE MIR -71 137 33 219 69 0 0 chr5 186972251 186972280 -16113252 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 2372 68 3 14 chr5 186972511 186972826 -16112706 - AluSc SINE Alu 0 309 1 589 286 52 26 chr5 186972830 186973099 -16112433 - L1MC4a LINE L1 -302 5819 5612 374 267 143 19 chr5 186974040 186974201 -16111331 + MER5A DNA MER1_type 8 188 -1 488 235 0 0 chr5 186974271 186974369 -16111163 - MER5A DNA MER1_type -83 106 9 2332 137 74 2 chr5 186974612 186975015 -16110517 - MSTB1 LTR MaLR 0 432 1 6162 211 84 31 chr5 186975015 186976214 -16109318 - MSTB1-int LTR MaLR 0 1651 349 2013 105 0 7 chr5 186976214 186976490 -16109042 + AluSq SINE Alu 1 274 -39 6162 211 84 31 chr5 186976490 186976857 -16108675 - MSTB1-int LTR MaLR -1302 349 3 1677 328 16 49 chr5 186976857 186976925 -16108607 - MSTB1 LTR MaLR -2 430 361 2046 124 41 0 chr5 186976925 186977215 -16108317 + AluSx SINE Alu 1 302 -10 1677 328 16 49 chr5 186977215 186977383 -16108149 - MSTB1 LTR MaLR -71 361 189 1700 89 102 0 chr5 186977383 186977618 -16107914 - AluSg SINE Alu -51 259 1 1677 328 16 49 chr5 186977618 186977825 -16107707 - MSTB1 LTR MaLR -243 189 1 215 178 0 22 chr5 186978929 186978952 -16106580 + (TAA)n Simple_repeat Simple_repeat 2 25 -20 2366 90 0 0 chr5 186978952 186979251 -16106281 + AluSg SINE Alu 1 299 -11 215 178 0 22 chr5 186979251 186979272 -16106260 + (TAA)n Simple_repeat Simple_repeat 25 45 0 574 237 15 0 chr5 186980002 186980137 -16105395 - MER58B DNA MER1_type -2 339 203 189 229 49 66 chr5 186980300 186980361 -16105171 - L2 LINE L2 -9 3263 3204 373 229 267 23 chr5 186980747 186980878 -16104654 - MER5A DNA MER1_type 0 189 27 1796 179 45 13 chr5 186981551 186981930 -16103602 - LTR45B LTR ERV1 -96 393 3 246 342 53 18 chr5 186982167 186982281 -16103251 - MIR SINE MIR -57 151 34 1273 135 98 81 chr5 186982341 186982407 -16103125 - MSTA LTR MaLR -1 427 364 1872 123 98 0 chr5 186982407 186982692 -16102840 - AluSq SINE Alu 0 313 1 1273 135 98 81 chr5 186982692 186982992 -16102540 - MSTA LTR MaLR -64 364 1 189 154 26 13 chr5 186983321 186983399 -16102133 + (TA)n Simple_repeat Simple_repeat 1 79 0 191 328 17 0 chr5 186983638 186983696 -16101836 + L2 LINE L2 3208 3266 -6 3547 166 55 27 chr5 186983781 186984492 -16101040 + MER44D DNA MER2_type 1 603 -2 2830 13 0 0 chr5 186984574 186984885 -16100647 - AluYb8 SINE Alu -7 311 1 587 299 81 5 chr5 186985075 186985272 -16100260 - MIR SINE MIR -49 213 2 786 211 70 19 chr5 186985272 186985485 -16100047 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr5 186985886 186985911 -16099621 + AT_rich Low_complexity Low_complexity 1 25 0 1128 47 0 0 chr5 186988363 186988490 -16097042 + AluY SINE Alu 1 127 -184 213 419 26 0 chr5 186988741 186988858 -16096674 + L2 LINE L2 3147 3266 -6 565 264 0 0 chr5 186989000 186989140 -16096392 - MER117 DNA MER1_type -28 169 30 1178 153 4 44 chr5 186989492 186989720 -16095812 + MER20 DNA MER1_type 1 219 0 291 28 0 0 chr5 186991328 186991364 -16094168 + (CA)n Simple_repeat Simple_repeat 1 36 0 2448 83 6 3 chr5 186991411 186991723 -16093809 - AluSq SINE Alu 0 313 1 24 53 0 0 chr5 186992584 186992622 -16092910 + AT_rich Low_complexity Low_complexity 1 38 0 225 394 7 7 chr5 186993246 186993383 -16092149 - MER5A DNA MER1_type -49 140 4 262 295 152 76 chr5 186994129 186994366 -16091166 - L2 LINE L2 -86 3186 2932 2539 37 0 3 chr5 186995425 186995723 -16089809 - AluY SINE Alu -14 297 1 1660 234 21 26 chr5 186995874 186996491 -16089041 - MLT2F LTR ERVL -4 659 1 228 303 40 30 chr5 186997099 186997198 -16088334 + L2 LINE L2 3173 3272 0 2353 71 0 0 chr5 186997330 186997612 -16087920 + AluSc SINE Alu 1 282 -27 343 292 141 50 chr5 186998254 186998658 -16086874 + L1MEd LINE L1 636 1076 -5043 275 250 195 52 chr5 186998691 186999037 -16086495 + HAL1 LINE L1 1218 1626 -881 2036 125 3 26 chr5 186999037 186999342 -16086190 + AluSx SINE Alu 1 298 -14 275 250 195 52 chr5 186999342 186999379 -16086153 + HAL1 LINE L1 1626 1656 -851 2167 95 14 3 chr5 186999898 187000378 -16085154 - AluY SINE Alu 0 485 3 413 133 0 0 chr5 187000380 187000440 -16085092 - MER5A DNA MER1_type -115 74 15 509 273 118 41 chr5 187000510 187000730 -16084802 - MIR SINE MIR -25 237 1 1208 298 136 44 chr5 187000996 187001028 -16084504 + L1M4 LINE L1 3865 3893 -2253 2255 103 3 10 chr5 187001028 187001328 -16084204 + AluSx SINE Alu 1 298 -14 1208 298 136 44 chr5 187001328 187001753 -16083779 + L1M4 LINE L1 3893 4278 -1868 1864 140 99 3 chr5 187001753 187002095 -16083437 + THE1C LTR MaLR 1 375 0 1208 298 136 44 chr5 187002095 187002853 -16082679 + L1M4 LINE L1 4278 5192 -954 300 271 39 0 chr5 187002861 187002990 -16082542 + L1P LINE L1 5209 5342 -804 244 248 0 50 chr5 187003134 187003235 -16082297 + (TA)n Simple_repeat Simple_repeat 1 96 0 1520 171 93 4 chr5 187003442 187003722 -16081810 + AluJb SINE Alu 1 305 -7 719 149 14 111 chr5 187003899 187004107 -16081425 + MER53 DNA DNA 2 189 0 1762 152 38 7 chr5 187005034 187005324 -16080208 - AluJo SINE Alu -13 299 1 2435 95 0 9 chr5 187005396 187005711 -16079821 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 187005863 187005885 -16079647 + (A)n Simple_repeat Simple_repeat 1 22 0 6671 76 93 4 chr5 187006321 187007338 -16078194 - L1PA10 LINE L1 -10 6158 5112 2176 105 0 10 chr5 187007465 187007760 -16077772 - AluSq SINE Alu -21 292 1 186 314 70 12 chr5 187007898 187007984 -16077548 - L2 LINE L2 -93 3220 3130 1244 190 12 73 chr5 187008140 187008311 -16077221 - MER58B DNA MER1_type -2079 341 198 2002 108 25 3 chr5 187008311 187008597 -16076935 + AluSg1 SINE Alu 1 292 -17 1244 190 12 73 chr5 187008597 187008752 -16076780 - MER58B DNA MER1_type -2222 198 35 317 146 0 0 chr5 187008750 187008798 -16076734 - Alu SINE Alu -254 48 1 * 211 217 43 0 chr5 187008851 187008897 -16076635 - MER5A DNA MER1_type -77 112 65 281 231 227 37 chr5 187009137 187009310 -16076222 + L1ME4a LINE L1 5768 5907 -214 2347 104 0 0 chr5 187009310 187009619 -16075913 - AluY SINE Alu -2 309 1 13562 130 40 21 chr5 187009619 187011158 -16074374 + Tigger1 DNA MER2_type 2 1510 -908 2332 86 7 0 chr5 187011158 187011460 -16074072 + AluSp SINE Alu 1 304 -9 13562 130 40 21 chr5 187011460 187011714 -16073818 + Tigger1 DNA MER2_type 1510 1758 -660 2192 113 0 31 chr5 187011714 187012032 -16073500 + AluSg SINE Alu 1 308 -2 13562 130 40 21 chr5 187012032 187012608 -16072924 + Tigger1 DNA MER2_type 1758 2418 0 281 231 227 37 chr5 187012608 187012728 -16072804 + L1ME4a LINE L1 5906 6118 -3 2339 74 0 19 chr5 187012825 187013135 -16072397 + AluY SINE Alu 1 304 -7 2197 103 3 0 chr5 187013146 187013437 -16072095 + AluSq SINE Alu 1 292 -21 458 117 0 45 chr5 187013595 187013706 -16071826 + (TTTC)n Simple_repeat Simple_repeat 4 109 0 1792 165 4 0 chr5 187013718 187013990 -16071542 - AluJb SINE Alu -39 273 1 1355 173 15 112 chr5 187014307 187014659 -16070873 + AluJo SINE Alu 1 298 -14 2037 115 10 3 chr5 187014763 187015051 -16070481 + AluSx SINE Alu 5 294 -18 279 308 105 14 chr5 187015067 187015210 -16070322 - L3 LINE CR1 -132 1445 1290 260 288 74 45 chr5 187015328 187015418 -16070114 - MIR3 SINE MIR -46 216 130 2307 105 0 0 chr5 187015418 187015713 -16069819 + AluSc SINE Alu 5 299 -10 260 288 74 45 chr5 187015713 187015830 -16069702 - MIR3 SINE MIR -132 130 6 423 269 44 77 chr5 187016985 187017167 -16068365 + MLT1K LTR MaLR 2 177 -411 324 193 35 0 chr5 187017369 187017426 -16068106 + LTR67 LTR ERVL 497 555 -2 2175 114 3 0 chr5 187017870 187018169 -16067363 - AluSp SINE Alu -13 300 1 448 219 21 0 chr5 187018213 187018319 -16067213 + L1MB3 LINE L1 5700 5807 -387 816 210 28 6 chr5 187018320 187018501 -16067031 + L1MB3 LINE L1 5990 6174 -9 21 0 0 0 chr5 187018807 187018828 -16066704 + AT_rich Low_complexity Low_complexity 1 21 0 734 276 12 62 chr5 187019025 187019268 -16066264 - MIR SINE MIR 0 262 32 2044 129 0 0 chr5 187019387 187019724 -16065808 + AluSc SINE Alu 1 337 0 324 213 27 27 chr5 187019878 187019953 -16065579 + L2 LINE L2 3196 3270 -2 298 225 190 0 chr5 187020324 187020443 -16065089 + MIR SINE MIR 48 199 -63 220 333 61 23 chr5 187020557 187020689 -16064843 - MIR3 SINE MIR -3 205 69 2152 98 39 3 chr5 187020714 187021000 -16064532 - AluSq SINE Alu -14 299 4 370 278 150 64 chr5 187021001 187021235 -16064297 - MIR SINE MIR -2 260 7 2171 253 102 17 chr5 187023711 187024719 -16060813 - L1MDb LINE L1 -4571 1835 773 364 242 26 26 chr5 187026011 187026164 -16059368 - L1MDa LINE L1 -5110 1430 1278 551 338 65 0 chr5 187027113 187027314 -16058218 - MIR SINE MIR -2 260 47 1721 189 0 11 chr5 187027629 187027941 -16057591 - AluJo SINE Alu 0 309 1 23 0 0 0 chr5 187027998 187028021 -16057511 + AT_rich Low_complexity Low_complexity 1 23 0 7311 36 6 14 chr5 187028021 187029438 -16056094 - L1PA4 LINE L1 0 6155 4752 872 217 38 116 chr5 187029485 187029800 -16055732 - MLT1A1 LTR MaLR 0 365 85 1854 107 0 104 chr5 187029800 187030157 -16055375 + AluSx SINE Alu 1 324 0 872 217 38 116 chr5 187030157 187030236 -16055296 - MLT1A1 LTR MaLR -280 85 1 244 485 0 0 chr5 187030291 187030423 -16055109 + L2 LINE L2 3141 3272 0 2924 240 86 112 chr5 187030607 187032411 -16053121 + Charlie7 DNA MER1_type 212 1955 -657 768 153 0 0 chr5 187032411 187032529 -16053003 - FLAM_C SINE Alu -15 118 1 2924 240 86 112 chr5 187032529 187032858 -16052674 + Charlie7 DNA MER1_type 1955 2291 -321 261 0 0 0 chr5 187032895 187032924 -16052608 + (ATG)n Simple_repeat Simple_repeat 2 30 0 1827 158 0 26 chr5 187033192 187033503 -16052029 - AluSx SINE Alu -3 309 7 192 230 230 60 chr5 187033700 187033800 -16051732 + MIR SINE MIR 33 149 -113 24 0 0 0 chr5 187033877 187033901 -16051631 + AT_rich Low_complexity Low_complexity 1 24 0 1699 190 0 13 chr5 187034190 187034495 -16051037 + AluJo SINE Alu 2 302 -10 278 192 0 14 chr5 187034919 187034992 -16050540 + GA-rich Low_complexity Low_complexity 2 73 0 1372 194 3 51 chr5 187086096 187086390 -15999142 + AluJo SINE Alu 1 280 -32 243 0 0 0 chr5 187086400 187086427 -15999105 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1058 271 96 38 chr5 187086464 187086963 -15998569 - MLT1F LTR MaLR -5 537 10 261 310 11 0 chr5 187086974 187087061 -15998471 - MIR3 SINE MIR -40 168 81 597 182 10 0 chr5 187087184 187087283 -15998249 - Tigger7 DNA MER2_type 0 2491 2392 * 661 270 154 9 chr5 187087280 187087430 -15998102 - Tigger7 DNA MER2_type -2220 267 140 1872 166 0 0 chr5 187087430 187087736 -15997796 - AluSx SINE Alu 0 306 1 661 270 154 9 chr5 187087736 187087817 -15997715 - Tigger7 DNA MER2_type -2347 140 1 21 0 0 0 chr5 187087871 187087892 -15997640 + AT_rich Low_complexity Low_complexity 1 21 0 2039 106 3 34 chr5 187088737 187089057 -15996475 - AluSg SINE Alu 0 310 1 21 36 0 0 chr5 187090135 187090163 -15995369 + AT_rich Low_complexity Low_complexity 1 28 0 295 308 30 68 chr5 187090194 187090327 -15995205 + MIR SINE MIR 49 176 -86 1563 223 73 96 chr5 187090345 187090920 -15994612 - MLT1F1 LTR MaLR -3 564 3 269 250 114 29 chr5 187090926 187091066 -15994466 - MLT1F1-int LTR MaLR -6 1365 1214 268 313 15 111 chr5 187091194 187091392 -15994140 - MLT1F1-int LTR MaLR -238 1133 955 245 360 117 0 chr5 187091494 187091605 -15993927 - MLT1F1-int LTR MaLR -492 879 756 24 0 0 0 chr5 187091651 187091675 -15993857 + AT_rich Low_complexity Low_complexity 1 24 0 5278 89 17 3 chr5 187091675 187092380 -15993152 - L1MA1 LINE L1 0 6302 5588 468 246 46 23 chr5 187092663 187092793 -15992739 - MLT1F1-int LTR MaLR -770 601 469 1958 126 19 35 chr5 187092794 187093111 -15992421 + AluSq SINE Alu 1 312 -1 1013 192 133 98 chr5 187093140 187093457 -15992075 - MLT1F1 LTR MaLR -236 331 4 1430 190 66 81 chr5 187093468 187093862 -15991670 + MLT1B LTR MaLR 3 390 0 219 322 103 27 chr5 187094102 187094248 -15991284 - MIR SINE MIR -49 213 57 724 196 90 87 chr5 187094658 187095103 -15990429 - MLT1H LTR MaLR 0 549 29 255 260 227 18 chr5 187095169 187095357 -15990175 + MIR SINE MIR 16 246 -16 21 36 0 0 chr5 187096210 187096238 -15989294 + AT_rich Low_complexity Low_complexity 1 28 0 196 337 53 30 chr5 187096555 187096724 -15988808 - L2 LINE L2 -992 2322 2150 1049 123 0 47 chr5 187096916 187096952 -15988580 - AluSg/x SINE Alu 0 312 276 225 65 0 0 chr5 187096952 187096983 -15988549 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1049 123 0 47 chr5 187096983 187097117 -15988415 - AluSg/x SINE Alu -36 276 150 242 29 29 0 chr5 187097130 187097165 -15988367 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 2192 108 0 0 chr5 187097167 187097453 -15988079 - AluSc SINE Alu -23 286 1 222 37 0 0 chr5 187097735 187097762 -15987770 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1919 127 0 34 chr5 187097764 187098056 -15987476 - AluSx SINE Alu -30 282 1 2257 98 3 3 chr5 187098436 187098731 -15986801 - AluSc SINE Alu -14 295 1 309 211 0 0 chr5 187099055 187099107 -15986425 + 5S rRNA rRNA 2 53 -68 295 206 99 84 chr5 187099879 187100010 -15985522 - MIR SINE MIR -108 154 22 596 328 72 8 chr5 187100622 187100884 -15984648 + L2 LINE L2 3030 3308 -5 1932 135 25 0 chr5 187100941 187101223 -15984309 - AluSx SINE Alu -9 303 15 1854 107 4 0 chr5 187101668 187101951 -15983581 + AluSc SINE Alu 36 319 0 24 0 0 0 chr5 187102797 187102821 -15982711 + AT_rich Low_complexity Low_complexity 1 24 0 4652 111 93 136 chr5 187102866 187104316 -15981216 - pTR5 LTR ERV1 0 2438 382 625 238 67 21 chr5 187104469 187104662 -15980870 + MIR SINE MIR 4 205 -57 272 304 14 14 chr5 187104715 187104784 -15980748 + L2 LINE L2 3194 3262 -10 2341 88 0 25 chr5 187104785 187105104 -15980428 + AluY SINE Alu 1 311 0 2165 106 0 0 chr5 187105290 187105602 -15979930 + AluSx SINE Alu 1 312 0 539 264 86 54 chr5 187105602 187105917 -15979615 - Charlie8 DNA MER1_type -2006 411 87 21 0 0 0 chr5 187106300 187106321 -15979211 + AT_rich Low_complexity Low_complexity 1 21 0 186 290 43 0 chr5 187106746 187106815 -15978717 - L2 LINE L2 -67 3246 3175 304 146 78 29 chr5 187106844 187106947 -15978585 + (TATAG)n Simple_repeat Simple_repeat 3 110 0 325 234 63 27 chr5 187107027 187107138 -15978394 + MIR SINE MIR 128 242 -20 2257 116 0 0 chr5 187107275 187107569 -15977963 + AluSc SINE Alu 1 294 -15 845 225 34 64 chr5 187107712 187107772 -15977760 - L1ME3 LINE L1 -5 6157 6097 2466 81 0 3 chr5 187107772 187108079 -15977453 - AluSg SINE Alu -4 306 1 845 225 34 64 chr5 187108079 187108316 -15977216 - L1ME3 LINE L1 -65 6097 5869 642 214 62 111 chr5 187108344 187108495 -15977037 - L1ME3 LINE L1 -625 5539 5382 2411 96 0 3 chr5 187108495 187108807 -15976725 - AluY SINE Alu 0 311 1 642 214 62 111 chr5 187108807 187109049 -15976483 - L1ME3 LINE L1 -782 5382 5139 830 196 0 22 chr5 187109051 187109189 -15976343 - FRAM SINE Alu -25 151 17 1485 176 43 43 chr5 187109234 187109440 -15976092 + AluSx SINE Alu 1 209 -103 2212 120 0 3 chr5 187109440 187109740 -15975792 + AluSg SINE Alu 1 299 -11 1485 176 43 43 chr5 187109740 187109835 -15975697 + AluSx SINE Alu 208 302 -10 2163 151 10 72 chr5 187110591 187111007 -15974525 - MLT1B LTR MaLR 0 390 1 2315 86 0 19 chr5 187111064 187111378 -15974154 + AluSc SINE Alu 1 308 -1 2111 53 0 11 chr5 187111785 187112049 -15973483 - AluY SINE Alu -50 261 1 936 247 87 39 chr5 187112519 187112980 -15972552 - L1ME4a LINE L1 -3 6118 5636 453 297 43 128 chr5 187113448 187113957 -15971575 + L2 LINE L2 2807 3272 0 321 305 28 21 chr5 187114458 187114599 -15970933 - MER103 DNA DNA -15 151 10 2281 88 3 19 chr5 187114875 187115183 -15970349 - AluSp SINE Alu -10 303 1 442 263 196 0 chr5 187115846 187116025 -15969507 + MIR SINE MIR 49 262 0 1464 141 20 138 chr5 187116518 187116866 -15968666 - AluYb8 SINE Alu -1 307 1 408 292 48 12 chr5 187117068 187117236 -15968296 + MIR SINE MIR 11 184 -78 341 304 94 0 chr5 187117917 187118055 -15967477 + MIR SINE MIR 48 198 -64 2317 108 0 0 chr5 187118150 187118455 -15967077 + AluSg1 SINE Alu 1 305 -4 268 352 49 19 chr5 187118605 187118767 -15966765 + MIR SINE MIR 21 187 -75 2049 106 4 4 chr5 187120065 187120340 -15965192 + AluSx SINE Alu 1 275 -37 183 296 19 0 chr5 187120350 187120404 -15965128 + MIR SINE MIR 146 200 -62 2118 114 0 3 chr5 187120454 187120769 -15964763 + AluSc SINE Alu 1 309 0 669 330 112 39 chr5 187120771 187121234 -15964298 - MLT1K LTR MaLR -69 519 23 2381 87 0 0 chr5 187122553 187122853 -15962679 + AluSx SINE Alu 1 300 -12 882 282 65 12 chr5 187122892 187123215 -15962317 + MER58B DNA MER1_type 1 340 -1 1419 214 54 0 chr5 187123775 187124132 -15961400 - AluJo SINE Alu 0 373 1 2211 97 3 0 chr5 187124390 187124700 -15960832 + AluY SINE Alu 1 311 0 272 310 0 0 chr5 187125679 187125750 -15959782 + MER58A DNA MER1_type 1 71 -36 1991 143 3 0 chr5 187125760 187126047 -15959485 - AluSx SINE Alu -24 288 1 359 330 6 0 chr5 187126074 187126276 -15959256 + L1ME LINE L1 5328 5527 -639 180 0 0 0 chr5 187126353 187126373 -15959159 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1569 186 0 38 chr5 187126373 187126664 -15958868 - AluJb SINE Alu -32 280 1 2511 60 13 0 chr5 187127074 187127375 -15958157 - AluY SINE Alu -6 305 1 213 211 0 0 chr5 187129024 187129076 -15956456 + GA-rich Low_complexity Low_complexity 4 55 0 251 355 0 21 chr5 187129102 187129195 -15956337 + MIR SINE MIR 1 91 -171 479 212 74 138 chr5 187129205 187129442 -15956090 - MIR SINE MIR -6 256 36 2528 61 0 0 chr5 187129442 187129737 -15955795 - AluY SINE Alu -14 297 3 479 212 74 138 chr5 187129737 187129768 -15955764 - MIR SINE MIR -226 36 5 257 323 43 0 chr5 187129799 187129892 -15955640 + MIR SINE MIR 96 192 -70 348 377 15 0 chr5 187130891 187131021 -15954511 - L2 LINE L2 0 3272 3141 711 174 123 0 chr5 187131113 187131247 -15954285 - MLT1B LTR MaLR 0 390 240 475 216 149 28 chr5 187131247 187131428 -15954104 - Charlie1b DNA MER1_type -2 521 319 1439 203 40 20 chr5 187131557 187131857 -15953675 - Charlie1b DNA MER1_type -217 306 1 185 0 0 39 chr5 187131876 187131902 -15953630 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 304 111 0 0 chr5 187132182 187132227 -15953305 - MER58B DNA MER1_type 0 341 297 3058 167 13 6 chr5 187132232 187132765 -15952767 + MER44D DNA MER2_type 2 593 -12 1383 210 24 17 chr5 187132772 187133063 -15952469 - MER58B DNA MER1_type -40 301 9 378 311 110 31 chr5 187133066 187133294 -15952238 + MIR SINE MIR 15 260 -2 278 311 29 29 chr5 187133430 187133533 -15951999 + MIR3 SINE MIR 73 175 -33 225 94 0 0 chr5 187133830 187133862 -15951670 + (CATTT)n Simple_repeat Simple_repeat 1 32 0 515 269 231 4 chr5 187134216 187134476 -15951056 - L2 LINE L2 -16 3297 2979 203 250 0 0 chr5 187134476 187134520 -15951012 + (ATGGTG)n Simple_repeat Simple_repeat 3 46 0 501 330 28 0 chr5 187134529 187134705 -15950827 - MIR SINE MIR -33 229 49 2372 67 0 0 chr5 187135823 187136121 -15949411 + AluY SINE Alu 7 304 -7 458 312 105 10 chr5 187136222 187136421 -15949111 - MIR SINE MIR -7 255 37 407 228 96 7 chr5 187136483 187136619 -15948913 + MER103 DNA DNA 9 156 -10 2086 138 0 3 chr5 187136756 187137201 -15948331 + AluSg SINE Alu 1 444 0 263 28 28 0 chr5 187138401 187138437 -15947095 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1999 98 0 7 chr5 187138437 187138712 -15946820 - AluSc SINE Alu -32 277 5 23 68 0 0 chr5 187138825 187138869 -15946663 + AT_rich Low_complexity Low_complexity 1 44 0 2282 93 7 0 chr5 187139059 187139359 -15946173 + AluY SINE Alu 1 302 -9 1750 233 18 42 chr5 187139971 187140465 -15945067 - MLT1D LTR MaLR -1 504 23 308 234 0 0 chr5 187140589 187140653 -15944879 + MIR SINE MIR 175 238 -24 333 344 25 0 chr5 187140896 187141018 -15944514 - L2 LINE L2 0 3313 3189 1717 203 76 49 chr5 187141114 187141601 -15943931 + MLT1D LTR MaLR 2 501 -4 2078 72 7 4 chr5 187142180 187142456 -15943076 + L1PA8A LINE L1 5824 6100 -31 219 45 91 0 chr5 187142456 187142500 -15943032 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1594 119 4 0 chr5 187146216 187146442 -15939090 - AluSg/x SINE Alu -8 304 78 22 56 0 0 chr5 187146829 187146865 -15938667 + AT_rich Low_complexity Low_complexity 1 36 0 1244 232 123 20 chr5 187147212 187147570 -15937962 + MSTD LTR MaLR 1 395 -1 253 289 67 39 chr5 187147688 187147792 -15937740 - L3 LINE CR1 -17 1560 1454 222 331 73 13 chr5 187147828 187147979 -15937553 - L3 LINE CR1 -287 1290 1131 1680 181 0 4 chr5 187147992 187148296 -15937236 - AluJb SINE Alu 0 305 3 387 0 0 0 chr5 187148376 187148419 -15937113 + (CA)n Simple_repeat Simple_repeat 2 44 0 904 319 99 14 chr5 187148525 187148939 -15936593 - L3 LINE CR1 -464 1113 665 322 324 99 16 chr5 187149038 187149220 -15936312 + MLT1K LTR MaLR 11 207 -381 401 258 56 76 chr5 187149362 187149560 -15935972 + MLT1K LTR MaLR 393 586 -2 2187 108 0 10 chr5 187149638 187149935 -15935597 - AluSx SINE Alu -14 298 5 340 347 85 25 chr5 187149939 187150138 -15935394 - L3 LINE CR1 -1120 457 247 1982 80 49 59 chr5 187152055 187152388 -15933144 + AluSx SINE Alu 1 330 0 247 280 53 114 chr5 187152503 187152540 -15932992 + MIR3 SINE MIR 4 42 -166 1612 194 40 0 chr5 187152540 187152864 -15932668 - MER58B DNA MER1_type -3 338 2 247 280 53 114 chr5 187152864 187152958 -15932574 + MIR3 SINE MIR 42 127 -81 219 69 0 0 chr5 187152971 187153000 -15932532 + (TG)n Simple_repeat Simple_repeat 1 29 0 279 140 0 0 chr5 187153000 187153050 -15932482 + (GA)n Simple_repeat Simple_repeat 2 51 0 185 188 0 83 chr5 187153257 187153305 -15932227 + L2 LINE L2 1559 1602 -1712 1750 138 69 0 chr5 187153420 187153711 -15931821 - AluY SINE Alu 0 311 1 393 271 21 0 chr5 187153715 187153811 -15931721 + MIR SINE MIR 127 224 -38 2029 120 21 7 chr5 187153843 187154134 -15931398 + AluSx SINE Alu 1 295 -17 210 105 0 0 chr5 187155304 187155342 -15930190 + (T)n Simple_repeat Simple_repeat 1 38 0 294 328 61 0 chr5 187156825 187156956 -15928576 + MIR SINE MIR 49 187 -75 256 335 97 27 chr5 187157861 187158046 -15927486 - MIR SINE MIR -14 248 51 231 88 0 0 chr5 187159027 187159061 -15926471 + (TG)n Simple_repeat Simple_repeat 2 35 0 605 284 52 64 chr5 187159289 187159539 -15925993 - MIR SINE MIR -6 256 10 256 293 12 12 chr5 187160306 187160388 -15925144 + GA-rich Low_complexity Low_complexity 3 84 0 2178 101 7 3 chr5 187161476 187161774 -15923758 - AluSq SINE Alu -14 299 1 600 272 108 14 chr5 187162199 187162412 -15923120 + MIR SINE MIR 30 262 0 494 341 99 5 chr5 187162834 187163045 -15922487 + MIR SINE MIR 8 238 -24 2428 86 0 0 chr5 187163181 187163485 -15922047 - AluSg SINE Alu -2 308 5 632 82 69 9 chr5 187164696 187164935 -15920597 + (TA)n Simple_repeat Simple_repeat 1 253 0 834 245 45 95 chr5 187164945 187165192 -15920340 - L1ME1 LINE L1 -64 6102 5887 509 15 0 0 chr5 187165192 187165258 -15920274 - L1PA2 LINE L1 0 6155 6090 834 245 45 95 chr5 187165258 187165472 -15920060 - L1ME1 LINE L1 -279 5887 5664 352 355 11 49 chr5 187165645 187165853 -15919679 - MIR3 SINE MIR -56 206 9 224 307 44 51 chr5 187165864 187166001 -15919531 - L2 LINE L2 -1 3312 3177 2205 128 0 3 chr5 187166222 187166535 -15918997 + AluSx SINE Alu 1 312 0 212 293 63 83 chr5 187166669 187166874 -15918658 - L2 LINE L2 -536 2778 2578 751 330 149 16 chr5 187167805 187168490 -15917042 + L2 LINE L2 1951 2726 -588 213 121 0 0 chr5 187168763 187168796 -15916736 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 1840 148 23 7 chr5 187168797 187169100 -15916432 - AluSx SINE Alu -4 308 1 278 247 99 0 chr5 187170424 187170505 -15915027 - MIR SINE MIR 0 262 174 2477 162 25 70 chr5 187171335 187171945 -15913587 - L1 LINE L1 -1350 4796 4215 * 3100 162 41 6 chr5 187171943 187172225 -15913307 + L1M2 LINE L1 4761 5032 -1151 1745 54 0 18 chr5 187172225 187172447 -15913085 + AluY SINE Alu 1 218 -93 3100 162 41 6 chr5 187172447 187172822 -15912710 + L1M2 LINE L1 5032 5440 -743 2446 74 3 0 chr5 187172847 187173156 -15912376 + AluY SINE Alu 1 310 -1 844 289 79 28 chr5 187173550 187173984 -15911548 - L2 LINE L2 -105 3208 2740 217 277 191 21 chr5 187174222 187174316 -15911216 - L2 LINE L2 -38 3275 3166 2110 120 10 0 chr5 187174359 187174659 -15910873 + AluSx SINE Alu 1 303 -9 2186 112 0 0 chr5 187174672 187174967 -15910565 + AluSx SINE Alu 11 305 -7 238 286 0 0 chr5 187175020 187175076 -15910456 + L2 LINE L2 3237 3292 -21 252 389 81 42 chr5 187175661 187175944 -15909588 + L2 LINE L2 2959 3252 -20 183 80 0 0 chr5 187175951 187175976 -15909556 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 187177090 187177111 -15908421 + AT_rich Low_complexity Low_complexity 1 21 0 213 254 16 16 chr5 187177752 187177815 -15907717 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 317 287 98 24 chr5 187179142 187179306 -15906226 - MIR SINE MIR -86 176 1 531 302 33 14 chr5 187179342 187179554 -15905978 - MIR SINE MIR -37 225 10 1985 102 0 67 chr5 187180573 187180886 -15904646 + AluSc SINE Alu 1 292 -17 195 42 0 0 chr5 187181641 187181665 -15903867 + (TG)n Simple_repeat Simple_repeat 1 24 0 2048 125 3 3 chr5 187182241 187182530 -15903002 - AluSg SINE Alu -21 289 1 312 309 43 0 chr5 187182589 187182683 -15902849 - MIR SINE MIR -71 191 94 369 291 63 16 chr5 187182757 187182884 -15902648 + L2 LINE L2 3174 3306 -7 217 271 0 0 chr5 187182856 187182904 -15902628 - L2 LINE L2 -3 3310 3263 * 1961 288 54 42 chr5 187182962 187183557 -15901975 - L2 LINE L2 -176 3137 2525 2163 87 31 3 chr5 187183557 187183844 -15901688 + AluSc SINE Alu 1 295 -14 1961 288 54 42 chr5 187183844 187184207 -15901325 - L2 LINE L2 -788 2525 2168 265 272 9 61 chr5 187184385 187184499 -15901033 - LTR67 LTR ERVL -54 503 396 2200 104 0 36 chr5 187184633 187184940 -15900592 - AluSc SINE Alu -13 296 1 333 259 14 129 chr5 187185002 187185056 -15900476 - MIR SINE MIR -67 195 136 1572 194 3 31 chr5 187185056 187185350 -15900182 - AluJb SINE Alu -26 286 1 333 259 14 129 chr5 187185350 187185442 -15900090 - MIR SINE MIR -126 136 66 2021 64 71 4 chr5 187185582 187185902 -15899630 + AluY SINE Alu 1 338 0 2354 95 0 0 chr5 187187076 187187382 -15898150 - AluY SINE Alu -5 306 1 22 35 0 0 chr5 187187394 187187423 -15898109 + AT_rich Low_complexity Low_complexity 1 29 0 304 301 38 87 chr5 187187486 187187615 -15897917 + MIR SINE MIR 21 140 -122 2206 120 0 0 chr5 187187615 187187915 -15897617 + AluSc SINE Alu 1 300 -9 304 301 38 87 chr5 187187915 187187968 -15897564 + MIR SINE MIR 140 194 -68 2089 194 10 15 chr5 187187968 187188360 -15897172 - MLT1B LTR MaLR 0 390 1 186 43 0 0 chr5 187188454 187188477 -15897055 + (T)n Simple_repeat Simple_repeat 1 23 0 433 123 0 0 chr5 187188975 187189040 -15896492 - Alu SINE Alu -2 310 246 339 125 0 0 chr5 187189334 187189382 -15896150 + Alu SINE Alu 245 292 -10 307 243 26 79 chr5 187189884 187190036 -15895496 - L1ME4a LINE L1 -26 6095 5952 362 235 27 115 chr5 187190098 187190206 -15895326 - MIR SINE MIR -33 229 142 2242 121 0 9 chr5 187190206 187190521 -15895011 + AluSx SINE Alu 1 312 0 362 235 27 115 chr5 187190521 187190595 -15894937 - MIR SINE MIR -120 142 63 213 200 0 0 chr5 187190654 187190694 -15894838 + (TG)n Simple_repeat Simple_repeat 1 40 0 2406 99 0 0 chr5 187190861 187191165 -15894367 + AluSx SINE Alu 1 304 -8 572 276 59 0 chr5 187191202 187191354 -15894178 - MIR SINE MIR -24 238 78 2300 100 7 0 chr5 187191981 187192291 -15893241 - AluSx SINE Alu 0 312 1 322 264 95 74 chr5 187193225 187193373 -15892159 + MIR3 SINE MIR 31 181 -27 756 176 163 90 chr5 187193439 187193740 -15891792 - MER33 DNA MER1_type 0 324 2 342 0 0 0 chr5 187193844 187193882 -15891650 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1872 148 0 4 chr5 187193885 187194162 -15891370 - AluSx SINE Alu -31 281 6 339 25 0 0 chr5 187194164 187194204 -15891328 + (A)n Simple_repeat Simple_repeat 1 40 0 846 167 0 0 chr5 187194496 187194622 -15890910 + FLAM_C SINE Alu 2 127 -6 683 106 38 8 chr5 187194622 187194754 -15890778 + GA-rich Low_complexity Low_complexity 1 136 0 2679 49 0 0 chr5 187194779 187195083 -15890449 + AluY SINE Alu 1 304 -7 189 94 0 0 chr5 187195577 187195609 -15889923 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 1617 166 31 7 chr5 187195640 187195930 -15889602 - AluSx SINE Alu -15 297 1 642 194 97 111 chr5 187197180 187197353 -15888179 + MER20 DNA MER1_type 1 173 -46 1968 107 4 4 chr5 187197353 187197639 -15887893 + AluSc SINE Alu 17 302 0 642 194 97 111 chr5 187197639 187197681 -15887851 + MER20 DNA MER1_type 173 214 -5 224 167 21 0 chr5 187198092 187198140 -15887392 + CT-rich Low_complexity Low_complexity 3 51 0 189 366 14 14 chr5 187198577 187198648 -15886884 + L2 LINE L2 2999 3069 -203 2068 113 13 3 chr5 187198695 187198997 -15886535 + AluY SINE Alu 2 306 -5 4405 122 304 96 chr5 187199051 187200453 -15885079 + pTR5 LTR ERV1 741 2433 -5 1979 201 87 2 chr5 187201923 187202316 -15883216 - MSTB LTR MaLR 0 426 1 2118 122 0 20 chr5 187202403 187202707 -15882825 + AluSx SINE Alu 1 298 -14 4827 124 48 89 chr5 187202887 187203905 -15881627 - pTR5 LTR ERV1 0 2438 1315 2424 112 21 5 chr5 187204059 187204443 -15881089 + pTR5 LTR ERV1 3 392 -2046 774 277 171 60 chr5 187204558 187205096 -15880436 + MLT1L LTR MaLR 4 601 -14 23 0 0 0 chr5 187205286 187205309 -15880223 + AT_rich Low_complexity Low_complexity 1 23 0 324 264 142 7 chr5 187205424 187205572 -15879960 + L1ME LINE L1 5669 5836 -285 984 148 38 29 chr5 187205575 187205785 -15879747 - L1MC3 LINE L1 0 7785 7574 2792 115 6 16 chr5 187205785 187206281 -15879251 + MER4B-int LTR ERV1 6225 6758 0 3579 128 60 47 chr5 187206281 187206479 -15879053 + MER4B LTR ERV1 1 195 -415 2018 129 23 10 chr5 187206479 187206781 -15878751 + AluSx SINE Alu 7 312 0 3579 128 60 47 chr5 187206781 187207184 -15878348 + MER4B LTR ERV1 195 610 0 4788 205 20 37 chr5 187207186 187208311 -15877221 - L1MC3 LINE L1 -808 6977 5872 654 212 57 40 chr5 187208307 187208333 -15877199 - L1M2 LINE L1 -4241 2186 2162 * 2023 141 3 6 chr5 187208333 187208645 -15876887 + AluSq SINE Alu 1 311 -2 654 212 57 40 chr5 187208645 187208847 -15876685 - L1M2 LINE L1 -4265 2162 1742 2093 128 7 10 chr5 187209295 187209601 -15875931 + AluSx SINE Alu 8 312 0 213 200 0 0 chr5 187209734 187209774 -15875758 + (TG)n Simple_repeat Simple_repeat 1 40 0 2170 109 0 0 chr5 187209941 187210226 -15875306 + AluSx SINE Alu 1 285 -27 1999 127 21 0 chr5 187210240 187210366 -15875166 + AluSx SINE Alu 1 123 -189 324 0 0 0 chr5 187210366 187210402 -15875130 + (CA)n Simple_repeat Simple_repeat 2 37 0 1999 127 21 0 chr5 187210402 187210566 -15874966 + AluSx SINE Alu 123 297 -15 1900 132 17 3 chr5 187210568 187210856 -15874676 + AluSx SINE Alu 1 292 -20 2233 99 0 0 chr5 187210856 187211173 -15874359 + AluY SINE Alu 1 317 0 3770 227 50 59 chr5 187211174 187211616 -15873916 - L1MCb LINE L1 -4844 1720 1276 1798 176 0 0 chr5 187211616 187211905 -15873627 - AluJb SINE Alu -23 289 1 3770 227 50 59 chr5 187211905 187213163 -15872369 - L1MCb LINE L1 -5288 1276 30 28 0 0 0 chr5 187216242 187216270 -15869262 + AT_rich Low_complexity Low_complexity 1 28 0 429 110 0 0 chr5 187217488 187217561 -15867971 + (CTG)n Simple_repeat Simple_repeat 2 74 0 408 111 0 0 chr5 187217682 187217730 -15867802 + (CA)n Simple_repeat Simple_repeat 1 111 0 408 111 0 0 chr5 187217730 187217793 -15867739 + (CA)n Simple_repeat Simple_repeat 2 64 0 262 266 64 11 chr5 187219030 187219124 -15866408 - MIR SINE MIR -75 187 89 273 313 102 0 chr5 187219283 187219411 -15866121 - L2 LINE L2 0 3313 3173 260 291 38 130 chr5 187219450 187219711 -15865821 + L2 LINE L2 2955 3191 -81 252 0 0 0 chr5 187219736 187219764 -15865768 + (CA)n Simple_repeat Simple_repeat 1 28 0 558 281 17 17 chr5 187219783 187219961 -15865571 - MIR SINE MIR -84 178 1 460 206 224 2 chr5 187221593 187221777 -15863755 - Charlie8 DNA MER1_type -2188 229 58 285 241 12 60 chr5 187222866 187222949 -15862583 - MIR3 SINE MIR -54 154 76 249 296 19 74 chr5 187223292 187223400 -15862132 - MIR3 SINE MIR -45 163 62 230 324 54 9 chr5 187223478 187223589 -15861943 + MIR SINE MIR 47 162 -100 335 309 15 29 chr5 187223590 187223726 -15861806 + MIR SINE MIR 129 262 0 267 242 171 19 chr5 187224666 187224877 -15860655 - L1ME4a LINE L1 -6 6115 5873 271 231 82 129 chr5 187225506 187225560 -15859972 + MIR SINE MIR 98 153 -109 2308 113 7 0 chr5 187225560 187225869 -15859663 + AluSx SINE Alu 1 311 -1 271 231 82 129 chr5 187225869 187225961 -15859571 + MIR SINE MIR 153 237 -25 300 298 40 58 chr5 187226062 187226259 -15859273 + MIR SINE MIR 12 208 -54 283 323 71 20 chr5 187226540 187226639 -15858893 - L2 LINE L2 -5 3308 3205 2294 109 6 6 chr5 187227112 187227424 -15858108 - AluSx SINE Alu 0 312 1 2119 113 0 29 chr5 187229867 187230177 -15855355 - AluSx SINE Alu -11 301 1 382 299 209 6 chr5 187230249 187230426 -15855106 + MIR SINE MIR 35 247 -15 529 258 187 36 chr5 187231179 187231385 -15854147 + L2 LINE L2 2720 2894 -419 2480 84 3 0 chr5 187231385 187231694 -15853838 - AluSg SINE Alu 0 310 1 529 258 187 36 chr5 187231694 187231874 -15853658 + L2 LINE L2 2894 3155 -158 345 212 94 0 chr5 187231939 187232024 -15853508 - MER63 DNA MER1_type -91 745 27 314 308 39 23 chr5 187232034 187232164 -15853368 + L2 LINE L2 3144 3275 -38 219 172 47 78 chr5 187232269 187232333 -15853199 - L2 LINE L2 -6 3307 3246 1133 146 0 0 chr5 187232334 187232505 -15853027 - AluSg/x SINE Alu -5 307 137 675 255 18 126 chr5 187232517 187232913 -15852619 - L2 LINE L2 -74 3239 2887 232 234 31 16 chr5 187232935 187232999 -15852533 + AluS SINE Alu 1 65 -238 1822 131 16 49 chr5 187233663 187233969 -15851563 - AluSx SINE Alu -16 296 1 342 0 0 0 chr5 187234046 187234084 -15851448 + (TG)n Simple_repeat Simple_repeat 1 38 0 1868 222 29 45 chr5 187234084 187234633 -15850899 - L1MA10 LINE L1 -20 6314 5773 1668 138 42 31 chr5 187234636 187234991 -15850541 + L1MA10 LINE L1 5395 5753 -559 1013 301 63 29 chr5 187235017 187235310 -15850222 + L2 LINE L2 2678 2960 -353 2169 90 13 17 chr5 187235310 187235609 -15849923 - AluSg SINE Alu -10 300 3 1013 301 63 29 chr5 187235609 187235662 -15849870 + L2 LINE L2 2960 3010 -303 2260 81 0 19 chr5 187235662 187236006 -15849526 - AluY SINE Alu 0 311 1 1013 301 63 29 chr5 187236006 187236198 -15849334 + L2 LINE L2 3010 3313 0 287 288 119 34 chr5 187236215 187236726 -15848806 + L1ME LINE L1 5298 5796 -374 2167 125 7 0 chr5 187236783 187237080 -15848452 - AluSx SINE Alu -13 299 1 28 29 0 0 chr5 187237346 187237381 -15848151 + AT_rich Low_complexity Low_complexity 1 35 0 1858 113 26 43 chr5 187237649 187237951 -15847581 + AluY SINE Alu 1 297 -14 1173 215 0 0 chr5 187239214 187239437 -15846095 + MER58A DNA MER1_type 1 223 -1 213 39 0 0 chr5 187239853 187239879 -15845653 + (TTAGGG)n Simple_repeat Simple_repeat 4 29 0 365 281 106 12 chr5 187240094 187240254 -15845278 - MIR SINE MIR -15 247 73 504 86 0 0 chr5 187240339 187240409 -15845123 + (TA)n Simple_repeat Simple_repeat 2 71 0 2333 73 0 10 chr5 187240457 187240759 -15844773 + AluSx SINE Alu 1 299 -13 618 293 73 49 chr5 187241649 187242455 -15843077 + L1ME3 LINE L1 730 1604 -4702 2283 118 0 0 chr5 187242455 187242759 -15842773 + AluSq SINE Alu 1 304 -9 618 293 73 49 chr5 187242759 187242890 -15842642 + L1ME3 LINE L1 1604 1730 -4576 1991 110 0 69 chr5 187243032 187243349 -15842183 + AluSx SINE Alu 1 295 -17 215 301 0 0 chr5 187243481 187243554 -15841978 + A-rich Low_complexity Low_complexity 1 73 0 1189 272 120 31 chr5 187243655 187244838 -15840694 + L1ME3 LINE L1 2203 3490 -2639 2169 95 0 3 chr5 187244838 187245144 -15840388 + AluSc SINE Alu 1 305 0 486 275 154 14 chr5 187245206 187245642 -15839890 + L1ME3 LINE L1 3995 4491 -1638 595 282 56 43 chr5 187245692 187245961 -15839571 + L1ME3 LINE L1 4628 4905 -1224 2146 112 7 3 chr5 187245961 187246264 -15839268 + AluSg SINE Alu 1 304 -6 595 282 56 43 chr5 187246264 187246370 -15839162 + L1ME3 LINE L1 4905 5008 -1121 963 244 59 83 chr5 187246508 187246869 -15838663 + L1ME3 LINE L1 5237 5605 -540 232 167 183 0 chr5 187246869 187246929 -15838603 + MER116 DNA Mariner 3 73 -7 963 244 59 83 chr5 187246929 187247401 -15838131 + L1ME3 LINE L1 5605 6098 -47 821 280 104 40 chr5 187247615 187247969 -15837563 - L2 LINE L2 -1 3312 2936 1731 178 125 13 chr5 187248525 187248974 -15836558 + L1MB8 LINE L1 5667 6165 -13 1064 185 4 48 chr5 187251209 187251436 -15834096 - MER20 DNA MER1_type -2 217 1 3497 196 36 26 chr5 187253946 187255503 -15830029 + L1MB8 LINE L1 4354 5922 -256 24 0 0 0 chr5 187255696 187255720 -15829812 + AT_rich Low_complexity Low_complexity 1 24 0 2536 204 30 17 chr5 187255827 187256470 -15829062 + L1MB8 LINE L1 5272 5922 -256 25 0 0 0 chr5 187256472 187256497 -15829035 + AT_rich Low_complexity Low_complexity 1 25 0 357 82 0 0 chr5 187256575 187256624 -15828908 + (TA)n Simple_repeat Simple_repeat 2 50 0 255 208 52 21 chr5 187256918 187257014 -15828518 - L2 LINE L2 -137 3176 3078 394 363 139 8 chr5 187257160 187257427 -15828105 - L2 LINE L2 -469 2845 2544 555 297 24 57 chr5 187258368 187258614 -15826918 - MIR SINE MIR 0 262 25 801 186 23 17 chr5 187258797 187258974 -15826558 - MER5B DNA MER1_type 0 178 1 381 252 29 19 chr5 187259121 187259224 -15826308 + MER5A DNA MER1_type 9 112 -77 209 358 67 28 chr5 187259386 187259565 -15825967 - L2 LINE L2 -492 2822 2637 2327 98 10 0 chr5 187260555 187260860 -15824672 - AluSq SINE Alu -5 308 1 284 273 23 23 chr5 187263114 187263202 -15822330 - MIR SINE MIR -120 142 55 335 60 20 0 chr5 187263718 187263768 -15821764 + (GA)n Simple_repeat Simple_repeat 1 51 0 27 0 0 0 chr5 187263768 187263795 -15821737 + GC_rich Low_complexity Low_complexity 1 27 0 552 270 74 23 chr5 187263823 187264038 -15821494 - MIR SINE MIR -17 245 20 25 0 0 0 chr5 187264056 187264081 -15821451 + AT_rich Low_complexity Low_complexity 1 25 0 259 269 21 21 chr5 187264407 187264500 -15821032 + CT-rich Low_complexity Low_complexity 1 93 0 384 332 24 29 chr5 187264511 187264716 -15820816 + MIR SINE MIR 59 262 0 186 133 0 0 chr5 187265232 187265262 -15820270 + (T)n Simple_repeat Simple_repeat 1 30 0 240 347 33 82 chr5 187265809 187266054 -15819478 - L2 LINE L2 -39 3233 3001 24 0 0 0 chr5 187266615 187266639 -15818893 + AT_rich Low_complexity Low_complexity 1 24 0 33795 27 17 2 chr5 187266639 187272673 -15812859 - L1HS LINE L1 0 6155 4 2430 80 0 3 chr5 187272833 187273144 -15812388 + AluY SINE Alu 1 310 -1 1536 176 42 20 chr5 187273174 187273527 -15812005 - MER46B DNA MER2_type 0 236 1 403 303 109 29 chr5 187274349 187274524 -15811008 + MIR SINE MIR 26 214 -48 248 280 56 47 chr5 187275563 187275670 -15809862 + MIR SINE MIR 25 132 -130 349 203 47 0 chr5 187275813 187275877 -15809655 + MIR SINE MIR 34 100 -162 498 46 0 0 chr5 187275877 187275942 -15809590 + (TG)n Simple_repeat Simple_repeat 2 66 0 196 315 117 0 chr5 187276065 187276176 -15809356 + MIR SINE MIR 120 243 -19 2035 117 3 0 chr5 187276197 187276479 -15809053 + AluSx SINE Alu 6 288 -24 558 281 17 17 chr5 187276619 187276797 -15808735 + MIR SINE MIR 1 178 -84 342 0 0 0 chr5 187276816 187276854 -15808678 + (TG)n Simple_repeat Simple_repeat 1 38 0 247 287 50 142 chr5 187276879 187277140 -15808392 - L2 LINE L2 -81 3191 2955 273 313 102 0 chr5 187277179 187277307 -15808225 + L2 LINE L2 3173 3313 0 262 266 64 11 chr5 187277466 187277560 -15807972 + MIR SINE MIR 89 187 -75 408 111 0 0 chr5 187278777 187278797 -15806735 + (TG)n Simple_repeat Simple_repeat 1 83 0 408 111 0 0 chr5 187278797 187278860 -15806672 + (TG)n Simple_repeat Simple_repeat 2 64 0 483 101 0 0 chr5 187279029 187279108 -15806424 + (CAG)n Simple_repeat Simple_repeat 2 80 0 28 0 0 0 chr5 187280327 187280355 -15805177 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 187285477 187285508 -15800024 + AT_rich Low_complexity Low_complexity 1 31 0 204 152 0 43 chr5 187285940 187285986 -15799546 + (AGGTG)n Simple_repeat Simple_repeat 1 44 0 288 0 0 0 chr5 187287276 187287308 -15798224 + (TG)n Simple_repeat Simple_repeat 2 33 0 1746 130 6 93 chr5 187288931 187289108 -15796424 - AluSx SINE Alu -16 296 158 2118 112 41 3 chr5 187289108 187289402 -15796130 - AluSc SINE Alu -4 305 1 1746 130 6 93 chr5 187289402 187289548 -15795984 - AluSx SINE Alu -154 158 1 239 158 0 18 chr5 187290845 187290902 -15794630 + GA-rich Low_complexity Low_complexity 3 58 0 202 196 0 71 chr5 187294954 187295010 -15790522 + L2 LINE L2 3261 3312 -1 22 0 0 0 chr5 187295058 187295080 -15790452 + AT_rich Low_complexity Low_complexity 1 22 0 2436 75 0 7 chr5 187295089 187295397 -15790135 - AluY SINE Alu -5 306 1 2159 58 4 0 chr5 187295441 187295699 -15789833 + AluSx SINE Alu 52 310 -2 37 39 0 0 chr5 187295823 187295874 -15789658 + AT_rich Low_complexity Low_complexity 1 51 0 2420 73 0 6 chr5 187295918 187296231 -15789301 + AluY SINE Alu 1 311 0 495 266 36 21 chr5 187296250 187296442 -15789090 + MER58B DNA MER1_type 143 337 -4 421 255 87 58 chr5 187297140 187297348 -15788184 - MIR SINE MIR -44 218 5 601 354 35 26 chr5 187297904 187298272 -15787260 - L2 LINE L2 -220 3052 2676 809 239 114 49 chr5 187298320 187298847 -15786685 + L1MC5 LINE L1 7323 7883 -78 245 118 20 0 chr5 187298847 187298898 -15786634 + (TTATA)n Simple_repeat Simple_repeat 2 53 0 514 343 91 18 chr5 187298937 187299223 -15786309 - L2 LINE L2 -604 2710 2404 315 348 171 26 chr5 187299292 187300071 -15785461 - L2 LINE L2 -624 2690 1799 198 143 0 0 chr5 187300867 187300902 -15784630 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 223 320 93 10 chr5 187301992 187302089 -15783443 - MIR3 SINE MIR -7 201 97 375 187 13 0 chr5 187302207 187302282 -15783250 + AluSg/x SINE Alu 216 291 -9 724 213 0 0 chr5 187302381 187302522 -15783010 + FLAM_C SINE Alu 3 143 0 502 188 0 0 chr5 187302548 187302628 -15782904 + FRAM SINE Alu 66 145 -31 196 73 0 49 chr5 187302631 187302672 -15782860 + (TAA)n Simple_repeat Simple_repeat 2 40 0 25 0 0 0 chr5 187302798 187302823 -15782709 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 187304909 187304931 -15780601 + AT_rich Low_complexity Low_complexity 1 22 0 2294 116 0 0 chr5 187305512 187305814 -15779718 - AluSg SINE Alu -6 304 3 239 252 37 74 chr5 187306294 187306429 -15779103 - HAL1b LINE L1 -31 1317 1188 2314 95 3 16 chr5 187306510 187306827 -15778705 - AluSp SINE Alu 0 313 1 504 254 90 0 chr5 187307814 187308003 -15777529 + LTR16C LTR ERVL 286 491 0 273 307 31 62 chr5 187308112 187308334 -15777198 - L1ME LINE L1 -454 5667 5451 2394 87 0 3 chr5 187309956 187310254 -15775278 + AluSp SINE Alu 1 297 -16 265 303 55 55 chr5 187310718 187310883 -15774649 - MIR SINE MIR -4 258 94 614 318 54 37 chr5 187312127 187312476 -15773056 - L2 LINE L2 -9 3304 2950 655 268 55 12 chr5 187312479 187312643 -15772889 + MER91A DNA MER1_type 1 171 -25 183 42 0 0 chr5 187312693 187312717 -15772815 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 57 0 0 chr5 187312717 187312752 -15772780 + AT_rich Low_complexity Low_complexity 1 35 0 484 344 48 44 chr5 187312762 187313012 -15772520 - L2 LINE L2 -379 2935 2685 1529 107 5 9 chr5 187313367 187313583 -15771949 + AluSg/x SINE Alu 89 303 -9 191 129 0 0 chr5 187314947 187314978 -15770554 + L2 LINE L2 3268 3298 -15 2370 77 0 40 chr5 187315828 187316152 -15769380 + AluY SINE Alu 1 311 0 817 129 0 39 chr5 187316413 187316568 -15768964 + L1MB1 LINE L1 5760 5908 -260 283 317 40 10 chr5 187316828 187316929 -15768603 - MLT1L LTR MaLR -409 206 103 230 204 167 0 chr5 187317191 187317245 -15768287 + MIR SINE MIR 82 144 -64 667 220 75 23 chr5 187317255 187317428 -15768104 - MER58A DNA MER1_type -42 182 1 266 240 30 70 chr5 187318709 187318809 -15766723 + MIR SINE MIR 117 212 -50 222 37 0 0 chr5 187319008 187319035 -15766497 + (TCCA)n Simple_repeat Simple_repeat 3 29 0 2256 114 3 0 chr5 187319317 187319625 -15765907 - AluSx SINE Alu -3 309 1 199 282 24 47 chr5 187320157 187320242 -15765290 - MIR3 SINE MIR -1 207 125 184 342 76 13 chr5 187320389 187320468 -15765064 + MIR3 SINE MIR 96 179 -29 1744 154 44 3 chr5 187320717 187321015 -15764517 + AluSx SINE Alu 1 310 -2 764 289 47 17 chr5 187321612 187321847 -15763685 + MIR SINE MIR 21 262 0 789 212 5 11 chr5 187322224 187322413 -15763119 - MER53 DNA DNA -1 188 1 529 204 90 114 chr5 187322444 187322699 -15762833 + Charlie8 DNA MER1_type 79 1414 -1003 793 316 95 19 chr5 187324160 187324634 -15760898 - L2 LINE L2 0 3313 2804 447 268 150 7 chr5 187324786 187324939 -15760593 - MER5B DNA MER1_type -3 175 1 1609 169 70 0 chr5 187324949 187325304 -15760228 - Charlie5 DNA MER1_type 0 2622 2243 557 192 17 17 chr5 187325313 187325433 -15760099 - Charlie5 DNA MER1_type -2487 125 6 214 344 172 7 chr5 187325545 187325696 -15759836 + MIR SINE MIR 57 232 -30 565 294 22 55 chr5 187326010 187326285 -15759247 + Charlie8 DNA MER1_type 9 274 -2143 217 386 0 30 chr5 187327133 187327265 -15758267 - MIR3 SINE MIR -39 169 42 254 281 149 37 chr5 187327488 187327651 -15757881 - L1ME4a LINE L1 -2 6119 5976 2021 122 34 3 chr5 187327651 187327946 -15757586 + AluSx SINE Alu 1 304 -8 254 281 149 37 chr5 187327946 187328266 -15757266 - L1ME4a LINE L1 -145 5976 5582 218 209 26 43 chr5 187328459 187328574 -15756958 + (TA)n Simple_repeat Simple_repeat 1 113 0 306 349 0 34 chr5 187328682 187328828 -15756704 + MIR3 SINE MIR 58 198 -10 332 288 83 8 chr5 187329410 187329542 -15755990 + MIR SINE MIR 57 198 -64 235 276 0 26 chr5 187330196 187330272 -15755260 + Charlie8 DNA MER1_type 135 208 -2209 242 318 34 11 chr5 187330815 187330903 -15754629 - MER5A DNA MER1_type -22 167 78 2258 93 3 0 chr5 187331428 187331718 -15753814 - AluSp SINE Alu -22 291 1 2712 20 0 0 chr5 187334203 187334504 -15751028 + AluYa5 SINE Alu 1 301 -10 523 309 109 57 chr5 187335418 187335585 -15749947 - L2 LINE L2 0 3313 3156 2059 125 0 10 chr5 187335585 187335888 -15749644 - AluSx SINE Alu -12 300 1 523 309 109 57 chr5 187335888 187336195 -15749337 - L2 LINE L2 -157 3156 2814 711 324 86 32 chr5 187338780 187339185 -15746347 + L3 LINE CR1 1127 1553 -24 365 216 69 10 chr5 187339941 187340043 -15745489 + L2 LINE L2 1670 1777 -1537 21 57 0 0 chr5 187340554 187340589 -15744943 + AT_rich Low_complexity Low_complexity 1 35 0 429 289 63 31 chr5 187342739 187342898 -15742634 - MIR3 SINE MIR -23 185 22 293 335 130 63 chr5 187343026 187343578 -15741954 - L2 LINE L2 -10 3262 2749 2349 44 7 40 chr5 187343578 187343874 -15741658 + AluSc SINE Alu 1 286 -23 483 18 0 0 chr5 187343875 187343931 -15741601 + (GGAA)n Simple_repeat Simple_repeat 4 59 0 293 335 130 63 chr5 187343931 187344823 -15740709 - L2 LINE L2 -522 2750 1724 478 301 62 43 chr5 187345051 187345260 -15740272 + MIR SINE MIR 48 260 -2 2499 63 3 3 chr5 187346538 187346869 -15738663 - L1PA8 LINE L1 -6 6166 5836 215 341 83 15 chr5 187348580 187348712 -15736820 + L3b LINE CR1 1429 1569 -14 1830 158 19 22 chr5 187349984 187350306 -15735226 + MER1B DNA MER1_type 2 322 -17 5568 202 21 15 chr5 187401614 187403943 -15681589 - L1MC1 LINE L1 -16 6597 4120 807 183 32 18 chr5 187403941 187404187 -15681345 - L1MC1 LINE L1 -4597 1829 1494 * 564 139 5 43 chr5 187404200 187404387 -15681145 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 35 0 0 chr5 187404518 187404547 -15680985 + AT_rich Low_complexity Low_complexity 1 29 0 714 134 11 11 chr5 187404547 187404726 -15680806 + (TA)n Simple_repeat Simple_repeat 2 180 0 6471 183 25 69 chr5 187404765 187406277 -15679255 - L1MC1 LINE L1 -4960 1466 21 1461 206 25 53 chr5 187406538 187406859 -15678673 + AluJo SINE Alu 1 312 0 341 290 11 0 chr5 187406919 187407012 -15678520 + MER119 DNA MER1_type 4 97 -486 734 180 8 0 chr5 187407034 187407162 -15678370 + MER119 DNA MER1_type 455 583 0 2183 99 10 0 chr5 187407770 187408064 -15677468 - AluSq SINE Alu -16 297 1 21 57 0 0 chr5 187408106 187408141 -15677391 + AT_rich Low_complexity Low_complexity 1 35 0 982 166 117 35 chr5 187408360 187408432 -15677100 - MER33 DNA MER1_type -2271 314 249 2170 126 0 0 chr5 187408432 187408734 -15676798 + AluSg SINE Alu 1 302 -8 982 166 117 35 chr5 187408734 187408951 -15676581 - MER33 DNA MER1_type -2336 249 1 367 353 32 13 chr5 187408955 187409111 -15676421 + MER5A DNA MER1_type 26 184 -5 338 115 16 0 chr5 187409153 187409214 -15676318 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr5 187409311 187409333 -15676199 + AT_rich Low_complexity Low_complexity 1 22 0 484 276 135 47 chr5 187410642 187410939 -15674593 - L2 LINE L2 0 3313 2991 322 343 78 0 chr5 187411451 187411553 -15673979 - MER5B DNA MER1_type -31 147 38 22 35 0 0 chr5 187413002 187413031 -15672501 + AT_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr5 187413123 187413158 -15672374 + AT_rich Low_complexity Low_complexity 1 35 0 1879 46 0 4 chr5 187414449 187414686 -15670846 - L1PA5 LINE L1 -5 6149 5914 251 308 0 113 chr5 187416357 187416421 -15669111 + L2 LINE L2 3196 3239 -74 1187 218 32 9 chr5 187416421 187416737 -15668795 - MER33 DNA MER1_type -1 323 1 251 308 0 113 chr5 187416737 187416805 -15668727 + L2 LINE L2 3239 3313 0 269 277 11 11 chr5 187417712 187417806 -15667726 + HAL1b LINE L1 1191 1284 -64 2215 68 0 40 chr5 187418171 187418492 -15667040 - AluY SINE Alu 0 309 1 489 308 75 48 chr5 187418616 187418843 -15666689 - MIR SINE MIR -26 236 4 25 31 0 0 chr5 187418904 187418936 -15666596 + AT_rich Low_complexity Low_complexity 1 32 0 189 254 0 34 chr5 187419094 187419153 -15666379 - MIR SINE MIR -87 121 65 227 326 65 11 chr5 187419800 187419892 -15665640 - MIR SINE MIR -116 146 50 347 259 34 41 chr5 187420607 187420754 -15664778 - MIR SINE MIR -11 251 106 239 274 27 14 chr5 187422580 187422653 -15662879 + MIR SINE MIR 161 234 -28 1912 132 59 7 chr5 187424954 187425241 -15660291 - AluSx SINE Alu -10 302 1 250 323 40 20 chr5 187425511 187425610 -15659922 - MIR SINE MIR -134 128 28 34 24 0 0 chr5 187426166 187426207 -15659325 + AT_rich Low_complexity Low_complexity 1 41 0 2042 114 11 0 chr5 187426317 187426639 -15658893 + AluSp SINE Alu 1 325 0 2529 209 61 15 chr5 187426702 187427310 -15658222 + MER82 DNA MER2_type 4 639 -14 183 167 0 0 chr5 187427316 187427358 -15658174 + CT-rich Low_complexity Low_complexity 2 43 0 281 142 67 17 chr5 187427361 187427441 -15658091 + (TA)n Simple_repeat Simple_repeat 1 90 -36 2213 105 3 0 chr5 187427441 187427726 -15657806 - AluSp SINE Alu -27 286 1 281 142 67 17 chr5 187427726 187427765 -15657767 + (TA)n Simple_repeat Simple_repeat 90 126 0 273 128 0 0 chr5 187428727 187428774 -15656758 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 317 304 58 14 chr5 187428775 187428913 -15656619 + L1ME4a LINE L1 5715 5858 -263 263 267 44 37 chr5 187428995 187429130 -15656402 + L1ME4a LINE L1 5967 6102 -19 205 286 0 0 chr5 187429769 187429811 -15655721 - L2 LINE L2 -21 3292 3251 197 317 122 12 chr5 187430040 187430122 -15655410 - MIR SINE MIR -100 108 18 284 269 19 29 chr5 187430155 187430259 -15655273 + MIR SINE MIR 150 252 -10 1980 138 10 10 chr5 187430371 187430698 -15654834 - AluSx SINE Alu 0 312 1 416 275 100 25 chr5 187430700 187431020 -15654512 - MER113 DNA MER1_type? -96 425 82 387 316 29 22 chr5 187431408 187431547 -15653985 + L2 LINE L2 3133 3272 0 360 0 0 0 chr5 187432441 187432481 -15653051 + (TA)n Simple_repeat Simple_repeat 1 40 0 228 227 0 0 chr5 187432540 187432584 -15652948 + (CAA)n Simple_repeat Simple_repeat 1 44 0 505 287 15 0 chr5 187433582 187433718 -15651814 - MIR SINE MIR -7 255 118 260 211 19 0 chr5 187433815 187433867 -15651665 - MIR SINE MIR -164 98 46 453 294 65 22 chr5 187434983 187435032 -15650500 - MER5B DNA MER1_type 0 178 133 438 20 0 0 chr5 187435032 187435083 -15650449 + (CA)n Simple_repeat Simple_repeat 2 52 0 453 294 65 22 chr5 187435083 187435189 -15650343 - MER5B DNA MER1_type -45 133 27 489 317 35 89 chr5 187435228 187435742 -15649790 + L2 LINE L2 2825 3310 -3 2208 129 0 0 chr5 187435907 187436201 -15649331 - AluSg SINE Alu -16 294 1 2212 113 0 6 chr5 187436461 187436772 -15648760 + AluSq SINE Alu 4 312 -1 435 320 51 11 chr5 187436912 187437090 -15648442 - MIR SINE MIR -74 188 4 21 0 0 0 chr5 187438223 187438244 -15647288 + AT_rich Low_complexity Low_complexity 1 21 0 1208 230 17 7 chr5 187440186 187440482 -15645050 + MER58B DNA MER1_type 2 300 -41 634 311 64 8 chr5 187440632 187440867 -15644665 - MIR SINE MIR -10 252 5 257 271 187 9 chr5 187441477 187441584 -15643948 - LTR67 LTR ERVL 0 557 432 779 228 128 31 chr5 187442277 187442617 -15642915 - L1MB7 LINE L1 0 6184 5805 367 312 48 16 chr5 187443007 187443132 -15642400 - L2 LINE L2 0 3272 3144 242 314 226 29 chr5 187443164 187443572 -15641960 - L2 LINE L2 -8 3305 2818 21 0 0 0 chr5 187443742 187443763 -15641769 + AT_rich Low_complexity Low_complexity 1 21 0 469 197 28 20 chr5 187443767 187443878 -15641654 - L1ME3 LINE L1 -25 6137 6033 2427 92 0 7 chr5 187443878 187444184 -15641348 - AluSq SINE Alu -8 305 2 469 197 28 20 chr5 187444184 187444214 -15641318 - L1ME3 LINE L1 -129 6033 6005 807 109 49 60 chr5 187444228 187444411 -15641121 - L1MA7 LINE L1 0 6291 6111 364 261 26 17 chr5 187446987 187447102 -15638430 + MER5A DNA MER1_type 35 150 -39 657 285 53 10 chr5 187447172 187447379 -15638153 + MIR SINE MIR 17 232 -30 2245 82 4 0 chr5 187447506 187447825 -15637707 + AluSp SINE Alu 1 320 0 738 223 247 31 chr5 187449530 187449927 -15635605 + MLT1G1 LTR MaLR 9 449 -141 542 122 10 0 chr5 187449928 187450026 -15635506 + (TA)n Simple_repeat Simple_repeat 1 99 0 2181 115 0 0 chr5 187450036 187450322 -15635210 + AluSx SINE Alu 11 296 -16 374 257 183 0 chr5 187450446 187450609 -15634923 - MIR SINE MIR -12 250 58 2005 124 0 3 chr5 187450727 187451042 -15634490 - AluSx SINE Alu 0 314 1 181 380 0 0 chr5 187451172 187451243 -15634289 - MIR SINE MIR -119 143 73 204 125 0 0 chr5 187451966 187451998 -15633534 + (CA)n Simple_repeat Simple_repeat 2 33 0 372 342 71 50 chr5 187452021 187452343 -15633189 + L2 LINE L2 2939 3267 -5 2507 0 0 0 chr5 187453689 187453961 -15631571 + AluYa5 SINE Alu 1 272 -39 243 231 0 0 chr5 187454235 187454287 -15631245 + MIR SINE MIR 178 229 -33 341 350 74 18 chr5 187454623 187454906 -15630626 - L2 LINE L2 -466 2848 2550 337 128 49 39 chr5 187455071 187455103 -15630429 + GA-rich Low_complexity Low_complexity 2 32 -72 1958 106 10 55 chr5 187455103 187455415 -15630117 + AluSq SINE Alu 1 298 -15 337 128 49 39 chr5 187455415 187455484 -15630048 + GA-rich Low_complexity Low_complexity 32 104 0 294 271 195 8 chr5 187455856 187455974 -15629558 - MIR SINE MIR -108 154 15 2329 102 0 0 chr5 187456261 187456566 -15628966 - AluSx SINE Alu -7 305 1 206 305 172 33 chr5 187456625 187456776 -15628756 - MIR SINE MIR -35 227 56 24 32 0 0 chr5 187457355 187457386 -15628146 + AT_rich Low_complexity Low_complexity 1 31 0 1908 157 0 7 chr5 187461512 187461799 -15623733 + AluJb SINE Alu 15 299 -13 243 303 30 0 chr5 187462342 187462441 -15623091 - L1ME4a LINE L1 -198 5923 5822 452 309 126 17 chr5 187463969 187464199 -15621333 + MIR SINE MIR 2 256 -6 1467 280 77 2 chr5 187464224 187464653 -15620879 - LTR16B LTR ERVL -3 461 1 222 282 13 39 chr5 187465220 187465298 -15620234 + L2 LINE L2 3232 3307 -6 2466 78 0 0 chr5 187465360 187465669 -15619863 + AluY SINE Alu 1 309 -2 847 217 37 42 chr5 187465827 187466044 -15619488 - MER20 DNA MER1_type 0 219 4 184 322 17 0 chr5 187467172 187467231 -15618301 + MIR SINE MIR 43 102 -160 189 298 96 11 chr5 187467331 187467425 -15618107 + MIR SINE MIR 131 232 -30 1035 217 58 66 chr5 187467606 187467970 -15617562 - MLT1A1 LTR MaLR -4 361 1 359 308 51 0 chr5 187468983 187469139 -15616393 + MER117 DNA MER1_type 15 178 -19 792 322 65 31 chr5 187469375 187469791 -15615741 - L2 LINE L2 -78 3235 2806 286 221 39 87 chr5 187470176 187470280 -15615252 - MIR SINE MIR -68 194 96 1846 122 0 89 chr5 187471007 187471343 -15614189 + AluSx SINE Alu 1 306 -6 354 235 59 42 chr5 187472103 187472222 -15613310 + MIR3 SINE MIR 82 202 -6 185 359 0 39 chr5 187472583 187472661 -15612871 - L2 LINE L2 -2 3270 3196 187 254 28 28 chr5 187472722 187472793 -15612739 + MIR SINE MIR 186 256 -6 27 49 0 0 chr5 187472804 187472845 -15612687 + AT_rich Low_complexity Low_complexity 1 41 0 463 272 177 20 chr5 187473004 187473151 -15612381 + MER5A DNA MER1_type 13 182 -7 235 182 18 18 chr5 187473612 187473667 -15611865 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 313 318 104 17 chr5 187473726 187473899 -15611633 - MIR SINE MIR -9 253 66 186 133 0 0 chr5 187475620 187475650 -15609882 + (A)n Simple_repeat Simple_repeat 1 30 0 335 338 7 7 chr5 187476057 187476196 -15609336 + MIR SINE MIR 84 222 -40 185 318 18 55 chr5 187476230 187476340 -15609192 + L2 LINE L2 2766 2871 -443 678 213 138 12 chr5 187476363 187476523 -15609009 - MER5A DNA MER1_type -7 182 3 263 344 64 0 chr5 187477082 187477207 -15608325 + L2 LINE L2 3127 3259 -13 409 267 209 21 chr5 187477519 187477706 -15607826 + MIR SINE MIR 27 248 -14 639 247 46 11 chr5 187478330 187478504 -15607028 - MIR SINE MIR -1 261 82 216 0 0 0 chr5 187478880 187478904 -15606628 + (T)n Simple_repeat Simple_repeat 1 24 0 191 36 36 0 chr5 187479790 187479818 -15605714 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2354 92 0 0 chr5 187479820 187480112 -15605420 - AluSg SINE Alu -18 292 1 237 241 0 0 chr5 187480206 187480260 -15605272 - L1ME3 LINE L1 -52 6110 6057 224 375 0 0 chr5 187481116 187481212 -15604320 + GA-rich Low_complexity Low_complexity 3 98 0 204 40 0 0 chr5 187481420 187481445 -15604087 + (AATAG)n Simple_repeat Simple_repeat 3 27 0 2058 87 0 64 chr5 187483487 187483798 -15601734 + AluY SINE Alu 1 291 -20 1405 200 47 41 chr5 187484871 187485236 -15600296 - MLT1A2 LTR MaLR 0 374 8 330 306 42 28 chr5 187486434 187486578 -15598954 + MIR SINE MIR 8 153 -109 2349 105 0 6 chr5 187486601 187486915 -15598617 - AluSq SINE Alu -1 312 1 336 349 33 37 chr5 187487915 187488130 -15597402 - MIR SINE MIR -48 214 1 1571 105 50 0 chr5 187488155 187488413 -15597119 - L1MA1 LINE L1 -4 6298 6028 35 0 0 0 chr5 187490454 187490489 -15595043 + AT_rich Low_complexity Low_complexity 1 35 0 2127 109 0 3 chr5 187490559 187490842 -15594690 - AluSg SINE Alu -28 282 1 26 30 0 0 chr5 187492130 187492163 -15593369 + AT_rich Low_complexity Low_complexity 1 33 0 1244 213 131 42 chr5 187492793 187493243 -15592289 - MLT1D LTR MaLR -4 501 12 370 314 95 7 chr5 187493252 187493389 -15592143 + MIR SINE MIR 21 169 -93 225 224 17 0 chr5 187493894 187493952 -15591580 + (TTA)n Simple_repeat Simple_repeat 1 59 0 310 375 8 0 chr5 187495646 187495766 -15589766 - L2 LINE L2 -2 3311 3191 291 240 0 96 chr5 187496757 187496861 -15588671 + L2 LINE L2 3220 3313 0 1248 56 0 0 chr5 187497014 187497175 -15588357 - L1PA4 LINE L1 -3 6152 5992 259 245 170 0 chr5 187497199 187497293 -15588239 + L2 LINE L2 3164 3273 -40 389 321 96 91 chr5 187497509 187497936 -15587596 + L2 LINE L2 2809 3237 -35 197 179 0 18 chr5 187497941 187497997 -15587535 + GA-rich Low_complexity Low_complexity 1 55 0 232 423 52 5 chr5 187548494 187548707 -15536825 + MIR SINE MIR 27 249 -13 199 210 12 12 chr5 187550665 187550746 -15534786 + (CA)n Simple_repeat Simple_repeat 2 82 0 236 268 31 0 chr5 187551664 187551761 -15533771 - L1MDa LINE L1 -872 5668 5569 210 150 0 0 chr5 187551775 187551815 -15533717 + (TA)n Simple_repeat Simple_repeat 2 41 0 2701 258 19 10 chr5 187551851 187552734 -15532798 - L1MDa LINE L1 -1200 5340 4450 3511 244 34 50 chr5 187552748 187553133 -15532399 - L1MDa LINE L1 -2268 4272 3883 405 0 0 0 chr5 187553133 187553178 -15532354 + (TG)n Simple_repeat Simple_repeat 2 46 0 3511 244 34 50 chr5 187553178 187553357 -15532175 - L1MDa LINE L1 -2657 3883 3703 1180 172 92 77 chr5 187553357 187553695 -15531837 + MER2 DNA MER2_type 1 343 -1 3511 244 34 50 chr5 187553695 187554737 -15530795 - L1MDa LINE L1 -2837 3703 2690 195 42 0 0 chr5 187554740 187554764 -15530768 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 505 135 0 0 chr5 187554806 187554880 -15530652 + AluJ/FLAM SINE Alu 5 78 -234 4074 218 99 43 chr5 187555015 187556075 -15529457 - L1MDa LINE L1 -5176 1364 217 656 56 11 0 chr5 187556075 187556164 -15529368 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 4074 218 99 43 chr5 187556164 187556394 -15529138 - L1MDa LINE L1 -6323 217 1 2009 118 0 34 chr5 187556458 187556755 -15528777 - AluSg1 SINE Alu -17 292 6 2431 72 0 7 chr5 187557063 187557369 -15528163 + AluSq SINE Alu 1 304 -9 313 289 41 33 chr5 187557815 187557936 -15527596 - MIR SINE MIR 0 262 141 287 325 66 33 chr5 187557938 187558089 -15527443 - MIR SINE MIR -89 173 18 1005 140 39 24 chr5 187558392 187558599 -15526933 - AluSq SINE Alu -14 299 90 551 15 0 0 chr5 187561957 187562023 -15523509 - AluY SINE Alu -252 66 1 393 264 68 14 chr5 187563110 187563258 -15522274 - MIR SINE MIR -17 245 90 1272 208 110 6 chr5 187564512 187564829 -15520703 - MLT1A1 LTR MaLR -15 350 1 414 195 71 35 chr5 187565410 187565523 -15520009 + MER63 DNA MER1_type 3 745 -317 494 283 17 28 chr5 187566451 187566631 -15518901 - MER5B DNA MER1_type 0 178 1 239 265 37 118 chr5 187566979 187567115 -15518417 - MIR3 SINE MIR -3 205 81 235 203 68 0 chr5 187567203 187567262 -15518270 - L1MC/D LINE L1 -523 5836 5774 680 193 30 18 chr5 187567273 187567439 -15518093 - L1MB7 LINE L1 0 6184 6017 380 317 83 7 chr5 187567440 187567585 -15517947 - MIR SINE MIR -79 183 28 211 376 75 38 chr5 187567770 187567956 -15517576 + L2 LINE L2 3080 3272 0 1933 157 3 3 chr5 187568032 187568325 -15517207 + AluSx SINE Alu 1 293 -19 255 86 17 35 chr5 187569101 187569159 -15516373 + (TA)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr5 187569814 187569837 -15515695 + AT_rich Low_complexity Low_complexity 1 23 0 474 226 75 48 chr5 187570329 187570475 -15515057 - MIR SINE MIR -104 158 9 794 231 0 0 chr5 187570610 187570820 -15514712 + FRAM SINE Alu 1 74 0 1467 191 7 20 chr5 187572209 187572507 -15513025 - AluSx SINE Alu -18 294 1 272 376 0 0 chr5 187572507 187572600 -15512932 - L2 LINE L2 -39 3233 3141 3385 150 12 21 chr5 187574437 187575103 -15510429 - L1MA4A LINE L1 -22 6281 5622 12894 194 47 30 chr5 187575240 187576826 -15508706 - L1 LINE L1 -3286 3562 2005 2054 155 7 3 chr5 187576826 187577136 -15508396 - AluSx SINE Alu -1 311 1 12894 194 47 30 chr5 187577136 187577514 -15508018 - L1 LINE L1 -4843 2005 1635 2229 75 14 0 chr5 187577514 187577806 -15507726 - AluY SINE Alu -15 296 1 12894 194 47 30 chr5 187577806 187579344 -15506188 - L1 LINE L1 -5213 1635 1 357 362 17 29 chr5 187579362 187579536 -15505996 - MER5B DNA MER1_type -4 174 3 1825 132 73 20 chr5 187579637 187579993 -15505539 + THE1C LTR MaLR 1 375 0 6672 129 28 38 chr5 187579993 187581150 -15504382 + THE1C-int LTR MaLR 1 1145 -435 529 74 11 95 chr5 187581151 187581173 -15504359 + THE1B LTR MaLR 278 300 -64 2150 132 0 0 chr5 187581173 187581477 -15504055 - AluSg SINE Alu -6 304 1 529 74 11 95 chr5 187581477 187581549 -15503983 + THE1B LTR MaLR 300 364 0 221 294 0 0 chr5 187581573 187581624 -15503908 - L2 LINE L2 -8 3264 3214 229 335 89 25 chr5 187581705 187581863 -15503669 - L2 LINE L2 -3 3269 3102 2027 174 21 16 chr5 187583918 187584304 -15501228 - MLT1B LTR MaLR -2 388 1 1064 349 36 23 chr5 187584359 187584915 -15500617 - MLT1K LTR MaLR -6 582 20 254 173 0 19 chr5 187586158 187586210 -15499322 + L2 LINE L2 3263 3313 0 308 280 180 20 chr5 187586252 187586452 -15499080 + HsTC2 DNA Tc2 2 233 -1665 1303 214 120 38 chr5 187586505 187586666 -15498866 + HsTC2 DNA Tc2 1207 1353 -545 2396 86 7 0 chr5 187586666 187586970 -15498562 + AluSg1 SINE Alu 1 306 -3 1303 214 120 38 chr5 187586970 187587284 -15498248 + HsTC2 DNA Tc2 1353 1897 -1 203 179 0 0 chr5 187587628 187587667 -15497865 + A-rich Low_complexity Low_complexity 1 39 0 192 260 170 40 chr5 187588535 187588635 -15496897 + L2 LINE L2 3142 3254 -18 2267 115 0 3 chr5 187588693 187589007 -15496525 - AluSp SINE Alu 0 313 1 704 316 82 48 chr5 187590104 187590814 -15494718 - L2 LINE L2 -1 3312 1728 2331 114 0 16 chr5 187590967 187591284 -15494248 - AluSq SINE Alu -1 312 1 207 345 24 0 chr5 187591291 187591375 -15494157 + L2 LINE L2 3228 3313 0 1938 127 29 20 chr5 187591383 187591730 -15493802 + Tigger2a DNA MER2_type 1 350 -84 201 187 40 13 chr5 187592619 187592694 -15492838 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 256 305 0 0 chr5 187592884 187592966 -15492566 + MLT1E1 LTR MaLR 5 86 -568 256 292 10 10 chr5 187593620 187593716 -15491816 - MER117 DNA MER1_type -83 114 19 219 350 8 42 chr5 187593742 187593862 -15491670 - MIR SINE MIR -63 145 30 269 289 0 12 chr5 187595218 187595301 -15490231 - MIR SINE MIR -1 261 180 221 295 104 16 chr5 187595301 187595459 -15490073 - MIR SINE MIR -31 231 57 332 341 120 5 chr5 187596198 187596415 -15489117 - MIR SINE MIR -16 246 5 623 211 102 0 chr5 187596861 187597008 -15488524 - MER58B DNA MER1_type 0 341 180 31 0 0 0 chr5 187597221 187597252 -15488280 + AT_rich Low_complexity Low_complexity 1 31 0 38 61 0 0 chr5 187597328 187597394 -15488138 + AT_rich Low_complexity Low_complexity 1 66 0 1621 178 19 74 chr5 187597434 187597799 -15487733 - MER7A DNA MER2_type -3 343 1 349 333 0 0 chr5 187597880 187597979 -15487553 - L1MC4 LINE L1 -1330 6712 6614 324 243 0 68 chr5 187597937 187598040 -15487492 + L1MC4 LINE L1 6614 6709 -1333 * 1014 221 119 16 chr5 187598072 187598384 -15487148 - MER2 DNA MER2_type 0 344 1 460 219 10 10 chr5 187598627 187598723 -15486809 - MIR SINE MIR -147 115 20 211 231 0 19 chr5 187598826 187598878 -15486654 + L2 LINE L2 3262 3312 -1 233 206 0 15 chr5 187599291 187599359 -15486173 + (TA)n Simple_repeat Simple_repeat 2 68 0 219 139 0 0 chr5 187599358 187599394 -15486138 + (GA)n Simple_repeat Simple_repeat 2 37 0 * 370 302 79 20 chr5 187599575 187599777 -15485755 - Charlie8 DNA MER1_type -2144 273 60 222 37 0 0 chr5 187600545 187600572 -15484960 + (A)n Simple_repeat Simple_repeat 1 27 0 180 0 0 0 chr5 187601603 187601623 -15483909 + (TG)n Simple_repeat Simple_repeat 1 20 0 199 257 69 69 chr5 187603931 187604032 -15481500 + L2 LINE L2 2342 2442 -872 348 259 78 71 chr5 187604043 187604298 -15481234 + LTR16A1 LTR ERVL 201 457 0 371 364 29 35 chr5 187604298 187604471 -15481061 - MIR SINE MIR -89 173 2 28 61 0 0 chr5 187605098 187605147 -15480385 + AT_rich Low_complexity Low_complexity 1 49 0 267 260 0 48 chr5 187605213 187605317 -15480215 + GA-rich Low_complexity Low_complexity 2 100 0 269 328 98 0 chr5 187606276 187606398 -15479134 + MIR SINE MIR 58 191 -71 2201 125 0 7 chr5 187606461 187606766 -15478766 + AluSx SINE Alu 1 303 -9 967 224 61 46 chr5 187606972 187607452 -15478080 - MLT1E2 LTR MaLR -2 624 56 231 347 65 30 chr5 187607875 187608010 -15477522 + MIR3 SINE MIR 34 169 -39 23 0 0 0 chr5 187608019 187608042 -15477490 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 187608064 187608088 -15477444 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 187608388 187608409 -15477123 + AT_rich Low_complexity Low_complexity 1 21 0 652 265 37 33 chr5 187608704 187608919 -15476613 - Charlie8 DNA MER1_type -2197 220 5 194 320 13 27 chr5 187609003 187609078 -15476454 + MIR3 SINE MIR 99 172 -36 2202 136 0 0 chr5 187609112 187609414 -15476118 - AluSq SINE Alu -11 302 1 407 317 49 12 chr5 187610460 187610624 -15474908 + MIR SINE MIR 93 262 0 2004 109 3 33 chr5 187610629 187610931 -15474601 - AluSg SINE Alu -17 293 1 2147 108 0 65 chr5 187611852 187612175 -15473357 - AluSq SINE Alu -11 302 1 470 274 58 54 chr5 187612554 187612777 -15472755 + MIR SINE MIR 20 243 -19 1514 205 73 9 chr5 187612834 187613176 -15472356 + MLT1A1 LTR MaLR 1 364 -1 23 0 0 0 chr5 187613307 187613330 -15472202 + AT_rich Low_complexity Low_complexity 1 23 0 1317 106 6 0 chr5 187613605 187613784 -15471748 - AluSp SINE Alu -15 298 119 347 269 67 29 chr5 187614344 187614448 -15471084 + L2 LINE L2 3156 3263 -9 549 30 0 0 chr5 187614809 187614876 -15470656 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 938 236 37 0 chr5 187614915 187615131 -15470401 - MER58A DNA MER1_type 0 224 1 272 277 69 85 chr5 187617003 187617191 -15468341 - MIR SINE MIR -50 212 28 375 273 23 0 chr5 187618048 187618136 -15467396 + Tigger2 DNA MER2_type 2629 2718 0 190 338 77 67 chr5 187618161 187618460 -15467072 - L2 LINE L2 -1675 1639 1338 599 257 64 59 chr5 187620642 187621031 -15464501 + L1ME4a LINE L1 5512 5902 -219 217 216 0 0 chr5 187621553 187621590 -15463942 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 125 16 31 chr5 187621682 187621746 -15463786 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 719 302 17 17 chr5 187622343 187622575 -15462957 - MIR SINE MIR -27 235 4 21 0 0 0 chr5 187622717 187622738 -15462794 + AT_rich Low_complexity Low_complexity 1 21 0 855 225 11 6 chr5 187623619 187623801 -15461731 - MER5A DNA MER1_type -1 188 6 234 222 0 0 chr5 187624029 187624083 -15461449 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 234 91 0 0 chr5 187624688 187624721 -15460811 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 231 179 15 104 chr5 187624767 187624834 -15460698 - L2 LINE L2 -8 3305 3245 359 211 95 11 chr5 187625086 187625181 -15460351 + L2 LINE L2 3203 3305 -8 577 188 34 0 chr5 187625306 187625423 -15460109 + MER33 DNA MER1_type 5 125 -199 * 1020 191 6 0 chr5 187625421 187625604 -15459928 + AluJb SINE Alu 124 307 -5 707 169 63 16 chr5 187625617 187625806 -15459726 + MER33 DNA MER1_type 166 363 0 212 30 61 30 chr5 187627157 187627190 -15458342 - L2 LINE L2 -15 3298 3265 614 301 82 25 chr5 187627718 187628000 -15457532 - MLT1J1 LTR MaLR -148 298 1 195 364 15 58 chr5 187628264 187628344 -15457188 + MIR SINE MIR 20 102 -160 1436 212 6 19 chr5 187628344 187628655 -15456877 - AluJb SINE Alu -5 307 1 195 364 15 58 chr5 187628655 187628780 -15456752 + MIR SINE MIR 102 216 -46 576 292 76 69 chr5 187629834 187630298 -15455234 - L2 LINE L2 -93 3220 2746 210 71 0 0 chr5 187630317 187630345 -15455187 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 428 266 36 11 chr5 187632525 187632727 -15452805 - L1M3 LINE L1 -304 5817 5661 447 68 0 0 chr5 187633460 187633519 -15452013 + (TA)n Simple_repeat Simple_repeat 1 59 0 279 146 0 0 chr5 187633679 187633734 -15451798 + (TA)n Simple_repeat Simple_repeat 1 55 0 271 301 10 10 chr5 187633746 187633849 -15451683 - MLT1L LTR MaLR -2 613 511 953 204 16 0 chr5 187634441 187634627 -15450905 - MER5A DNA MER1_type 0 189 1 367 314 68 71 chr5 187634664 187634986 -15450546 - MER102b DNA MER1_type -19 322 2 209 280 98 76 chr5 187636078 187636210 -15449322 - L2 LINE L2 -1 3271 3137 193 68 45 23 chr5 187686964 187687008 -15398524 + A-rich Low_complexity Low_complexity 2 46 0 503 259 122 43 chr5 187687594 187688035 -15397497 - L1ME4a LINE L1 -2 6119 5644 268 276 48 7 chr5 187688451 187688596 -15396936 + (TA)n Simple_repeat Simple_repeat 1 151 0 1823 109 0 106 chr5 187689264 187689585 -15395947 - AluSx SINE Alu -17 295 9 824 174 36 72 chr5 187689823 187690018 -15395514 + AluJo SINE Alu 104 291 -21 1882 144 0 43 chr5 187690057 187690362 -15395170 + AluSx SINE Alu 5 296 -16 1307 139 14 14 chr5 187690369 187690584 -15394948 + AluSg SINE Alu 1 215 -95 185 122 102 61 chr5 187690646 187690695 -15394837 + MIR SINE MIR 95 145 -63 30 83 0 0 chr5 187691701 187691773 -15393759 + AT_rich Low_complexity Low_complexity 1 72 0 269 341 56 16 chr5 187692076 187692202 -15393330 - L1ME4a LINE L1 -2150 5658 5528 693 282 141 29 chr5 187692920 187693260 -15392272 + L2 LINE L2 2936 3313 0 305 315 0 19 chr5 187693528 187693636 -15391896 + (CATATA)n Simple_repeat Simple_repeat 3 108 0 307 280 47 85 chr5 187695994 187696205 -15389327 + MIR SINE MIR 60 262 0 302 330 52 42 chr5 187696274 187696465 -15389067 - MIR3 SINE MIR -6 202 10 231 268 0 18 chr5 187696675 187696731 -15388801 - L2 LINE L2 -3 3269 3215 201 238 0 113 chr5 187696930 187697010 -15388522 + L2 LINE L2 3239 3309 -4 1156 203 44 18 chr5 187697256 187697608 -15387924 + MSTD LTR MaLR 1 396 0 812 175 164 0 chr5 187698658 187698829 -15386703 + AluJo SINE Alu 90 288 -24 234 62 0 0 chr5 187698861 187698893 -15386639 + (CA)n Simple_repeat Simple_repeat 2 33 0 2185 108 3 10 chr5 187699093 187699399 -15386133 - AluSx SINE Alu -8 304 1 206 71 36 36 chr5 187699477 187699533 -15385999 + (TTTTTG)n Simple_repeat Simple_repeat 3 58 0 191 293 286 8 chr5 187699706 187699839 -15385693 + MIR SINE MIR 53 222 -40 236 335 39 52 chr5 187700466 187700604 -15384928 - MIR3 SINE MIR -49 159 38 243 120 40 20 chr5 187700639 187700689 -15384843 + L1MC4 LINE L1 6653 6703 -1339 204 139 70 0 chr5 187700690 187700733 -15384799 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 655 307 0 0 chr5 187701074 187701250 -15384282 + MER5A DNA MER1_type 10 185 -4 314 314 134 31 chr5 187701278 187701472 -15384060 + MIR SINE MIR 48 261 -1 494 350 36 51 chr5 187702991 187703439 -15382093 - L2 LINE L2 0 3313 2873 2126 93 0 4 chr5 187703660 187703938 -15381594 + AluSc SINE Alu 1 277 -32 201 39 0 0 chr5 187703940 187703966 -15381566 + (TAA)n Simple_repeat Simple_repeat 2 27 0 192 40 0 0 chr5 187703966 187703991 -15381541 + (TA)n Simple_repeat Simple_repeat 2 26 0 2351 29 0 0 chr5 187704298 187704575 -15380957 - L1PA4 LINE L1 -6 6149 5873 335 342 140 0 chr5 187704584 187704698 -15380834 - L2 LINE L2 -5 3267 3138 243 268 54 0 chr5 187704755 187704811 -15380721 + L2 LINE L2 3210 3268 -4 200 347 215 12 chr5 187705026 187705277 -15380255 - L2 LINE L2 -469 2845 2544 861 304 85 38 chr5 187705354 187705472 -15380060 + L2 LINE L2 2660 2771 -542 1828 119 63 7 chr5 187705472 187705758 -15379774 - AluSc SINE Alu -7 302 1 861 304 85 38 chr5 187705758 187706273 -15379259 + L2 LINE L2 2771 3313 0 2302 95 0 22 chr5 187706531 187706848 -15378684 + AluY SINE Alu 1 310 -1 281 298 17 12 chr5 187707306 187707406 -15378126 + MIR SINE MIR 40 141 -67 248 279 25 38 chr5 187707537 187707616 -15377916 - MIR SINE MIR -183 79 2 289 250 98 45 chr5 187707616 187707748 -15377784 + L3 LINE CR1 1332 1470 -107 2369 100 0 0 chr5 187708131 187708441 -15377091 + AluSg SINE Alu 1 310 0 356 304 83 30 chr5 187710434 187710602 -15374930 + MIR SINE MIR 56 232 -30 180 111 0 0 chr5 187710611 187710638 -15374894 + (TTA)n Simple_repeat Simple_repeat 1 27 0 655 296 33 17 chr5 187711216 187711456 -15374076 - MIR SINE MIR -4 258 15 289 243 0 29 chr5 187711737 187711807 -15373725 + CT-rich Low_complexity Low_complexity 4 71 0 2366 147 31 17 chr5 187712192 187712614 -15372918 - MSTA LTR MaLR 0 428 1 214 303 91 0 chr5 187712791 187712857 -15372675 - MIR3 SINE MIR -54 154 83 262 300 42 42 chr5 187713091 187713211 -15372321 - MIR SINE MIR -78 184 65 222 150 0 0 chr5 187713336 187713376 -15372156 + (T)n Simple_repeat Simple_repeat 1 40 0 1241 147 49 18 chr5 187713844 187714011 -15371521 + MER46A DNA MER2_type 5 182 -2549 2890 13 0 0 chr5 187714011 187714329 -15371203 + AluYb8 SINE Alu 1 318 0 1241 147 49 18 chr5 187714329 187714386 -15371146 + MER46A DNA MER2_type 182 236 0 672 346 26 23 chr5 187715498 187715845 -15369687 - MLT1I LTR MaLR -49 360 13 955 228 68 19 chr5 187715857 187716208 -15369324 - MLT1A2 LTR MaLR 0 390 1 1576 206 35 0 chr5 187716208 187716518 -15369014 - MLT1A2-int LTR MaLR 0 1735 1415 947 233 0 85 chr5 187716549 187716832 -15368700 - MLT1A2-int LTR MaLR -640 731 473 901 203 108 94 chr5 187716836 187717196 -15368336 + MLT1A1 LTR MaLR 1 365 0 969 190 110 0 chr5 187717201 187717494 -15368038 - MLT1A2-int LTR MaLR -1282 453 9 1177 232 58 26 chr5 187717513 187717858 -15367674 - MLT1A2 LTR MaLR -14 360 5 180 0 0 0 chr5 187718411 187718431 -15367101 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 28 29 0 0 chr5 187718865 187718900 -15366632 + AT_rich Low_complexity Low_complexity 1 35 0 4564 173 71 49 chr5 187719115 187719684 -15365848 - L1MC3 LINE L1 -1 7784 7229 2913 9 0 0 chr5 187719684 187720002 -15365530 - AluYb8 SINE Alu 0 318 1 4564 173 71 49 chr5 187720002 187720172 -15365360 - L1MC3 LINE L1 -556 7229 7064 195 100 0 0 chr5 187720172 187720202 -15365330 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4564 173 71 49 chr5 187720202 187720522 -15365010 - L1MC3 LINE L1 -721 7064 6701 22 35 0 0 chr5 187721063 187721092 -15364440 + AT_rich Low_complexity Low_complexity 1 29 0 184 368 15 0 chr5 187721175 187721243 -15364289 - MIR SINE MIR -100 108 40 218 129 48 16 chr5 187721288 187721350 -15364182 + (TA)n Simple_repeat Simple_repeat 1 64 0 291 140 0 0 chr5 187721435 187721485 -15364047 + (CA)n Simple_repeat Simple_repeat 2 51 0 219 36 0 0 chr5 187721485 187721513 -15364019 + (TA)n Simple_repeat Simple_repeat 2 29 0 1824 241 19 43 chr5 187723769 187723951 -15361581 - LTR40a LTR ERVL 0 519 334 1645 190 3 7 chr5 187723951 187724240 -15361292 - AluJb SINE Alu -16 296 9 1824 241 19 43 chr5 187724240 187724589 -15360943 - LTR40a LTR ERVL -185 334 1 243 260 0 0 chr5 187724694 187724744 -15360788 - L2 LINE L2 -29 3243 3194 339 167 21 21 chr5 187724813 187724909 -15360623 + CT-rich Low_complexity Low_complexity 4 99 0 264 273 40 71 chr5 187724937 187725036 -15360496 - L2 LINE L2 -18 3295 3200 425 300 74 42 chr5 187726189 187726379 -15359153 - L1ME1 LINE L1 -7 6159 5964 431 303 49 8 chr5 187726482 187726604 -15358928 - MIR SINE MIR -107 155 29 243 188 59 0 chr5 187726794 187726879 -15358653 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 327 49 0 0 chr5 187727575 187727588 -15357944 + (TG)n Simple_repeat Simple_repeat 1 54 0 327 49 0 0 chr5 187727588 187727629 -15357903 + (TG)n Simple_repeat Simple_repeat 2 42 0 311 175 0 126 chr5 187727696 187727799 -15357733 + L1MC4 LINE L1 6614 6703 -1339 308 208 0 94 chr5 187727821 187727917 -15357615 + L1MC4 LINE L1 6617 6703 -1339 603 116 4 91 chr5 187727924 187728395 -15357137 + (TA)n Simple_repeat Simple_repeat 1 429 0 243 273 30 0 chr5 187728454 187728520 -15357012 - MLT1J2 LTR MaLR -119 331 264 307 245 113 28 chr5 187728540 187728646 -15356886 - MLT1I LTR MaLR -203 206 92 666 282 51 78 chr5 187729185 187729518 -15356014 + MER102a DNA MER1_type 1 324 -6 2700 19 0 3 chr5 187730675 187730982 -15354550 - AluYa5 SINE Alu -5 306 1 251 302 241 11 chr5 187731787 187731990 -15353542 + MIR SINE MIR 6 252 -10 25 0 0 0 chr5 187733039 187733064 -15352468 + AT_rich Low_complexity Low_complexity 1 25 0 2333 85 3 19 chr5 187733075 187733392 -15352140 + AluSx SINE Alu 1 312 0 1206 207 38 4 chr5 187733952 187734218 -15351314 + ORSL DNA AcHobo 1 275 0 1878 80 141 0 chr5 187734471 187734734 -15350798 - AluSq SINE Alu -13 300 1 2966 270 145 53 chr5 187734919 187735978 -15349554 + L2 LINE L2 1233 2468 -846 441 0 0 0 chr5 187735978 187736027 -15349505 + (CA)n Simple_repeat Simple_repeat 1 49 0 2966 270 145 53 chr5 187736027 187736447 -15349085 + L2 LINE L2 2468 2848 -466 1262 202 4 4 chr5 187736725 187736977 -15348555 - L1P LINE L1 -986 5160 4908 2123 147 5 18 chr5 187736977 187737351 -15348181 + L1PA13 LINE L1 5784 6158 -5 412 270 88 44 chr5 187737417 187737576 -15347956 + L2 LINE L2 3148 3313 0 252 322 96 50 chr5 187737876 187738075 -15347457 - MIR SINE MIR -41 221 14 22 56 0 0 chr5 187738341 187738377 -15347155 + AT_rich Low_complexity Low_complexity 1 36 0 320 295 115 19 chr5 187740057 187740213 -15345319 - MIR SINE MIR 0 262 92 2418 94 0 0 chr5 187740618 187740925 -15344607 + AluY SINE Alu 5 311 0 514 325 97 19 chr5 187741076 187741387 -15344145 + L1MEd LINE L1 1316 1650 -4880 2370 242 87 33 chr5 187741397 187742763 -15342769 + L1MEd LINE L1 2289 3731 -2809 252 261 87 38 chr5 187742864 187743048 -15342484 + L1M4 LINE L1 2404 2596 -3550 693 277 75 70 chr5 187743058 187743541 -15341991 + L1M4 LINE L1 3001 3485 -2661 309 319 138 13 chr5 187743574 187743806 -15341726 - MIR SINE MIR -1 261 1 250 317 10 20 chr5 187743806 187743902 -15341630 + MIR SINE MIR 157 251 -11 22 35 0 0 chr5 187744803 187744832 -15340700 + AT_rich Low_complexity Low_complexity 1 29 0 838 269 144 73 chr5 187745666 187746160 -15339372 - L1MDa LINE L1 -5432 1108 580 1097 240 36 11 chr5 187746223 187746502 -15339030 - L1MDa LINE L1 -6238 302 17 2736 42 0 0 chr5 187747225 187747536 -15337996 + AluY SINE Alu 1 311 0 2360 85 3 19 chr5 187748507 187748825 -15336707 - AluSp SINE Alu 0 313 1 331 299 120 33 chr5 187748827 187749011 -15336521 + L2 LINE L2 3114 3313 0 1698 159 62 0 chr5 187751288 187751609 -15333923 + MER7A DNA MER2_type 5 343 -3 210 143 0 0 chr5 187752254 187752289 -15333243 + (T)n Simple_repeat Simple_repeat 1 35 0 202 113 0 94 chr5 187753798 187753851 -15331681 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 420 324 34 28 chr5 187755342 187755521 -15330011 + Charlie8 DNA MER1_type 1 180 -2237 205 191 21 0 chr5 187757020 187757067 -15328465 + (TG)n Simple_repeat Simple_repeat 1 48 0 198 0 0 0 chr5 187757666 187757688 -15327844 + (A)n Simple_repeat Simple_repeat 1 22 0 216 276 0 26 chr5 187757774 187757850 -15327682 + (CATA)n Simple_repeat Simple_repeat 2 75 0 186 43 0 0 chr5 187758644 187758667 -15326865 + (CA)n Simple_repeat Simple_repeat 1 23 0 10283 194 28 13 chr5 187759448 187759794 -15325738 - L1PB1 LINE L1 0 6151 5812 405 0 0 0 chr5 187759794 187759839 -15325693 + (TG)n Simple_repeat Simple_repeat 2 46 0 10283 194 28 13 chr5 187759839 187761188 -15324344 - L1PB1 LINE L1 -339 5812 4485 219 88 0 0 chr5 187761188 187761222 -15324310 + (TTG)n Simple_repeat Simple_repeat 3 36 0 10283 194 28 13 chr5 187761222 187762854 -15322678 - L1PB1 LINE L1 -1666 4485 2772 201 121 0 0 chr5 187763227 187763260 -15322272 + (TA)n Simple_repeat Simple_repeat 2 34 0 470 292 87 26 chr5 187763266 187763657 -15321875 - L1ME4a LINE L1 -72 6049 5635 189 429 45 11 chr5 187764872 187765140 -15320392 + L2 LINE L2 2804 3080 -192 744 294 84 39 chr5 187765223 187765325 -15320207 - L2 LINE L2 -756 2558 2462 2138 123 10 0 chr5 187765325 187765625 -15319907 + AluSx SINE Alu 5 307 -5 744 294 84 39 chr5 187765625 187765961 -15319571 - L2 LINE L2 -852 2462 2100 1766 228 99 8 chr5 187766232 187766705 -15318827 + MLT2B1 LTR ERVL 3 518 -2 1789 123 0 0 chr5 187766870 187767123 -15318409 + AluSg SINE Alu 52 304 -6 1361 300 70 35 chr5 187767220 187767894 -15317638 - L2 LINE L2 -148 3165 2484 5270 183 20 74 chr5 187767925 187768577 -15316955 - L1 LINE L1 -813 5333 4792 1700 179 0 10 chr5 187768577 187768874 -15316658 - AluJb SINE Alu -18 294 1 5270 183 20 74 chr5 187768874 187769583 -15315949 - L1 LINE L1 -1354 4792 4046 3704 166 7 18 chr5 187769578 187769614 -15315918 + L1MB1 LINE L1 5346 5381 -787 * 919 234 15 0 chr5 187769614 187769819 -15315713 + MER6B DNA MER2_type 2 209 -1 3704 166 7 18 chr5 187769819 187770468 -15315064 + L1MB1 LINE L1 5381 6024 -144 800 319 66 6 chr5 187770471 187770788 -15314744 - L2 LINE L2 -2720 594 259 275 318 12 0 chr5 187770801 187770886 -15314646 - L2 LINE L2 -3228 86 1 248 222 42 14 chr5 187771184 187771286 -15314246 + GA-rich Low_complexity Low_complexity 1 104 0 315 256 0 99 chr5 187772026 187772147 -15313385 + MIR SINE MIR 38 146 -62 380 312 26 39 chr5 187772155 187772309 -15313223 + MIR SINE MIR 16 167 -95 682 50 20 10 chr5 187772309 187772408 -15313124 + (TTTC)n Simple_repeat Simple_repeat 3 102 0 2018 110 0 31 chr5 187772412 187772702 -15312830 - AluSx SINE Alu -16 296 16 252 217 0 43 chr5 187772745 187772814 -15312718 + MIR SINE MIR 173 238 -24 213 308 176 0 chr5 187773418 187773509 -15312023 - L2 LINE L2 -14 3299 3193 430 336 68 14 chr5 187773541 187773761 -15311771 + MIR SINE MIR 4 235 -27 441 371 94 32 chr5 187773947 187774853 -15310679 - L2 LINE L2 -440 2874 1913 939 172 0 18 chr5 187774922 187775085 -15310447 + AluJb SINE Alu 137 296 -16 21 0 0 0 chr5 187775649 187775670 -15309862 + AT_rich Low_complexity Low_complexity 1 21 0 385 322 43 25 chr5 187776057 187776243 -15309289 + MIR SINE MIR 19 201 -61 220 261 0 0 chr5 187777087 187777133 -15308399 + (TG)n Simple_repeat Simple_repeat 1 46 0 500 0 17 0 chr5 187978124 187978184 -15107348 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2116 138 0 0 chr5 187978289 187978594 -15106938 + AluSq SINE Alu 1 305 -8 264 130 0 0 chr5 187978633 187978679 -15106853 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 446 264 56 14 chr5 187978996 187979140 -15106392 + L2 LINE L2 3161 3310 -3 2434 67 0 3 chr5 187980263 187980561 -15104971 - AluY SINE Alu -13 298 2 228 315 37 37 chr5 187981006 187981114 -15104418 - MIR3 SINE MIR -53 155 48 1801 40 0 18 chr5 187981331 187981545 -15103987 + L1PA5 LINE L1 5929 6140 -14 416 35 17 0 chr5 187981545 187981603 -15103929 + (TA)n Simple_repeat Simple_repeat 2 60 0 1801 40 0 18 chr5 187981603 187981616 -15103916 + L1PA5 LINE L1 6140 6152 -2 394 351 53 13 chr5 187982118 187982269 -15103263 + MIR3 SINE MIR 29 185 -23 391 246 0 60 chr5 187982921 187983055 -15102477 - MLT1K LTR MaLR 0 588 463 222 191 0 0 chr5 187983093 187983140 -15102392 + (TG)n Simple_repeat Simple_repeat 2 48 0 192 228 0 0 chr5 187983184 187983241 -15102291 + (TG)n Simple_repeat Simple_repeat 2 58 0 452 333 120 9 chr5 187983394 187983610 -15101922 - MLT1K LTR MaLR -311 277 38 576 0 0 0 chr5 187985922 187985986 -15099546 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2105 59 7 52 chr5 187985991 187986280 -15099252 - AluSp SINE Alu -37 276 1 22 0 0 0 chr5 187986741 187986763 -15098769 + AT_rich Low_complexity Low_complexity 1 22 0 2430 94 0 0 chr5 187986840 187987149 -15098383 + AluSx SINE Alu 2 310 -2 1006 261 4 30 chr5 187987292 187987560 -15097972 - MIR SINE MIR -1 261 1 3292 202 14 42 chr5 187987609 187988366 -15097166 - L1MB3 LINE L1 -2 6181 5446 416 19 19 0 chr5 187988544 187988597 -15096935 + (CA)n Simple_repeat Simple_repeat 2 55 0 256 348 0 0 chr5 187988734 187988823 -15096709 - MIR SINE MIR -58 150 62 273 57 0 0 chr5 187990714 187990749 -15094783 + (CATA)n Simple_repeat Simple_repeat 4 38 0 3544 141 127 47 chr5 187990792 187991557 -15093975 - LTR1B LTR ERV1 0 826 1 238 325 13 0 chr5 187991900 187991987 -15093545 - MIR SINE MIR -106 102 13 2124 128 10 0 chr5 187992128 187992432 -15093100 - AluSq SINE Alu -6 307 1 22 0 0 0 chr5 187993299 187993321 -15092211 + AT_rich Low_complexity Low_complexity 1 22 0 2262 50 7 7 chr5 187994184 187994492 -15091040 + AluY SINE Alu 1 308 0 1951 157 24 27 chr5 187995706 187996082 -15089450 + THE1C LTR MaLR 1 375 0 2254 92 0 0 chr5 187996582 187996866 -15088666 - AluSq SINE Alu -25 288 5 387 0 0 0 chr5 187999088 187999131 -15086401 + (T)n Simple_repeat Simple_repeat 1 43 0 310 314 40 32 chr5 187999572 187999696 -15085836 + MIR SINE MIR 20 144 -64 397 294 137 19 chr5 188002331 188002542 -15082990 + MIR SINE MIR 12 247 -15 204 241 190 13 chr5 188002581 188002660 -15082872 + MIR SINE MIR 46 138 -124 2252 97 0 7 chr5 188003174 188003472 -15082060 - AluSx SINE Alu -16 296 1 4910 197 84 47 chr5 188003911 188004133 -15081399 - Charlie1a DNA MER1_type -1306 1455 1243 3730 71 4 8 chr5 188004133 188004640 -15080892 - L1PA8 LINE L1 0 6172 5668 4910 197 84 47 chr5 188004640 188005245 -15080287 - Charlie1a DNA MER1_type -1518 1243 662 2179 126 0 3 chr5 188005245 188005555 -15079977 - AluSq SINE Alu -4 309 1 4910 197 84 47 chr5 188005555 188006126 -15079406 - Charlie1a DNA MER1_type -2099 662 5 284 70 23 0 chr5 188006424 188006467 -15079065 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 361 262 19 0 chr5 188006474 188006581 -15078951 + GA-rich Low_complexity Low_complexity 4 112 0 330 342 25 8 chr5 188007639 188007759 -15077773 - MIR SINE MIR -10 252 131 189 213 0 0 chr5 188007760 188007807 -15077725 + (TG)n Simple_repeat Simple_repeat 2 48 0 214 269 51 24 chr5 188007868 188007979 -15077553 - MIR SINE MIR -80 128 18 287 249 68 15 chr5 188008696 188008801 -15076731 - MER5A DNA MER1_type -48 141 17 1512 177 68 106 chr5 188009999 188010394 -15075138 + Cheshire DNA MER1_type 1 380 -2040 * 1711 169 24 32 chr5 188010388 188010760 -15074772 + Cheshire DNA MER1_type 2052 2420 0 304 262 105 76 chr5 188010851 188011023 -15074509 - L1ME4a LINE L1 -1 6120 5944 243 214 60 48 chr5 188011070 188011154 -15074378 - L1ME4a LINE L1 -262 5859 5775 29 0 0 0 chr5 188011207 188011236 -15074296 + AT_rich Low_complexity Low_complexity 1 29 0 382 295 34 13 chr5 188011488 188011637 -15073895 + MIR SINE MIR 103 254 -8 519 255 32 43 chr5 188011786 188011974 -15073558 + MIR SINE MIR 53 238 -24 1605 98 0 0 chr5 188012836 188013041 -15072491 + AluSg SINE Alu 1 205 -105 1269 207 37 81 chr5 188013046 188013394 -15072138 + MLT1B LTR MaLR 58 390 0 231 336 67 39 chr5 188015041 188015145 -15070387 - L2 LINE L2 -13 3259 3153 2475 77 0 0 chr5 188015180 188015491 -15070041 - AluY SINE Alu 0 311 1 216 289 0 0 chr5 188016205 188016340 -15069192 + (TG)n Simple_repeat Simple_repeat 2 136 0 201 228 18 18 chr5 188016344 188016401 -15069131 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr5 188016798 188016826 -15068706 + AT_rich Low_complexity Low_complexity 1 28 0 3413 275 75 44 chr5 188016926 188018590 -15066942 + L2 LINE L2 1554 3265 -48 578 293 47 45 chr5 188018626 188019097 -15066435 - L1ME4a LINE L1 -192 5929 5458 465 178 192 0 chr5 188019120 188019266 -15066266 - L1MD3 LINE L1 0 7995 7822 423 310 47 55 chr5 188021082 188021337 -15064195 + MIR SINE MIR 2 254 -8 443 311 108 70 chr5 188021560 188021930 -15063602 + L3 LINE CR1 1191 1574 -3 861 205 6 0 chr5 188022004 188022170 -15063362 + FRAM SINE Alu 9 175 -1 571 291 44 36 chr5 188022203 188022454 -15063078 + MIR SINE MIR 10 262 0 207 100 0 0 chr5 188023367 188023397 -15062135 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 23 54 0 0 chr5 188023894 188023931 -15061601 + AT_rich Low_complexity Low_complexity 1 37 0 189 94 0 0 chr5 188024087 188024119 -15061413 + (T)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr5 188027622 188027650 -15057882 + AT_rich Low_complexity Low_complexity 1 28 0 687 196 0 0 chr5 188028131 188028304 -15057228 + (TG)n Simple_repeat Simple_repeat 2 174 0 222 196 0 0 chr5 188028349 188028395 -15057137 + (TG)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 188028694 188028716 -15056816 + AT_rich Low_complexity Low_complexity 1 22 0 238 264 182 44 chr5 188030955 188031114 -15054418 + MER5A DNA MER1_type 4 184 -5 1594 123 13 4 chr5 188031115 188031343 -15054189 - AluSx SINE Alu -82 230 1 217 281 8 15 chr5 188031593 188031679 -15053853 + A-rich Low_complexity Low_complexity 3 131 0 1727 179 0 10 chr5 188031842 188032143 -15053389 + AluJb SINE Alu 14 311 -1 22 0 0 0 chr5 188032564 188032586 -15052946 + AT_rich Low_complexity Low_complexity 1 22 0 225 304 0 0 chr5 188033073 188033129 -15052403 + CT-rich Low_complexity Low_complexity 3 58 0 258 302 29 143 chr5 188033903 188034116 -15051416 - L2 LINE L2 -63 3209 3040 732 206 0 15 chr5 188034116 188034247 -15051285 + FLAM_C SINE Alu 1 129 -4 258 302 29 143 chr5 188034247 188034341 -15051191 - L2 LINE L2 -232 3040 2937 22 35 0 0 chr5 188034755 188034784 -15050748 + AT_rich Low_complexity Low_complexity 1 29 0 183 204 0 0 chr5 188036025 188036069 -15049463 + T-rich Low_complexity Low_complexity 1 44 0 2120 106 11 0 chr5 188037050 188037334 -15048198 - AluSx SINE Alu -24 288 2 492 297 79 44 chr5 188037887 188038116 -15047416 - MIR SINE MIR 0 262 26 299 143 18 18 chr5 188038295 188038351 -15047181 + L2 LINE L2 3254 3309 -4 491 112 24 40 chr5 188038798 188038923 -15046609 + GA-rich Low_complexity Low_complexity 3 125 0 194 362 70 97 chr5 188039282 188039611 -15045921 - L2 LINE L2 -7 3265 2946 248 341 44 0 chr5 188039763 188039854 -15045678 + MIR3 SINE MIR 65 159 -49 21 36 0 0 chr5 188040890 188040918 -15044614 + AT_rich Low_complexity Low_complexity 1 28 0 197 321 94 38 chr5 188042847 188042953 -15042579 - L2 LINE L2 -228 3044 2933 2344 90 0 0 chr5 188042957 188043257 -15042275 + AluSx SINE Alu 12 311 -1 236 256 111 67 chr5 188043709 188043799 -15041733 - L2 LINE L2 -41 3231 3138 450 127 0 0 chr5 188043826 188043897 -15041635 + (TA)n Simple_repeat Simple_repeat 1 71 0 1133 102 0 0 chr5 188043897 188044044 -15041488 - AluY SINE Alu -26 285 139 1807 115 100 0 chr5 188046123 188046392 -15039140 + AluSx SINE Alu 1 296 -16 322 241 13 0 chr5 188046660 188046739 -15038793 - MER116 DNA Mariner 0 80 1 183 129 0 0 chr5 188049136 188049167 -15036365 + (T)n Simple_repeat Simple_repeat 1 31 0 351 294 53 41 chr5 188050604 188050774 -15034758 + MIR3 SINE MIR 6 177 -31 586 225 93 80 chr5 188051099 188051516 -15034016 - MLT1D LTR MaLR -12 378 1 286 304 44 15 chr5 188051516 188051649 -15033883 - Charlie8 DNA MER1_type -2152 265 129 752 258 60 0 chr5 188052448 188052630 -15032902 + MIR SINE MIR 66 258 -4 224 326 258 0 chr5 188052712 188052844 -15032688 + MER5A DNA MER1_type 1 166 -23 * 304 227 80 0 chr5 188052772 188052847 -15032685 - MER5A DNA MER1_type -77 112 32 438 226 7 103 chr5 188052863 188053018 -15032514 + MER5B DNA MER1_type 17 156 -22 222 128 0 0 chr5 188054117 188054156 -15031376 + (TTA)n Simple_repeat Simple_repeat 3 41 0 24 67 0 0 chr5 188054312 188054357 -15031175 + AT_rich Low_complexity Low_complexity 1 45 0 306 0 0 0 chr5 188054906 188054940 -15030592 + (CA)n Simple_repeat Simple_repeat 1 34 0 27 49 0 0 chr5 188055144 188055185 -15030347 + AT_rich Low_complexity Low_complexity 1 41 0 238 214 0 0 chr5 188056294 188056336 -15029196 + L2 LINE L2 3267 3308 -5 22 35 0 0 chr5 188056637 188056666 -15028866 + AT_rich Low_complexity Low_complexity 1 29 0 501 301 60 11 chr5 188056941 188057124 -15028408 + MIR SINE MIR 48 239 -23 195 326 35 35 chr5 188057874 188057960 -15027572 + MIR3 SINE MIR 123 208 0 380 164 214 14 chr5 188058602 188058814 -15026718 + MER5C DNA MER1_type 1 324 0 1758 174 78 0 chr5 188059893 188060301 -15025231 - L1MA9 LINE L1 0 6312 5873 312 264 70 39 chr5 188060584 188060713 -15024819 - MIR SINE MIR -43 219 87 180 0 0 0 chr5 188060834 188060854 -15024678 + (TC)n Simple_repeat Simple_repeat 2 21 0 314 185 0 43 chr5 188060857 188060877 -15024655 + (TA)n Simple_repeat Simple_repeat 1 20 -68 2318 100 49 20 chr5 188060877 188061227 -15024305 - THE1B LTR MaLR -3 361 2 314 185 0 43 chr5 188061227 188061298 -15024234 + (TA)n Simple_repeat Simple_repeat 20 88 0 308 278 9 0 chr5 188061299 188061407 -15024125 + L1MC4 LINE L1 6614 6722 -1320 1491 190 0 54 chr5 188061973 188062303 -15023229 - AluJo SINE Alu 0 316 3 185 293 86 17 chr5 188062457 188062515 -15023017 + MIR SINE MIR 52 113 -149 806 127 163 24 chr5 188062960 188063126 -15022406 + MER53 DNA DNA 1 189 0 967 225 85 85 chr5 188064025 188064389 -15021143 + MLT1A1 LTR MaLR 2 365 0 420 306 136 7 chr5 188064459 188064606 -15020926 + MER91A DNA MER1_type 26 191 -5 344 318 91 45 chr5 188064620 188064796 -15020736 + MIR SINE MIR 50 233 -29 552 248 106 45 chr5 188064917 188065115 -15020417 - MER58C DNA MER1_type -4 211 2 2197 97 0 23 chr5 188065280 188065579 -15019953 + AluSq SINE Alu 1 292 -21 871 125 0 22 chr5 188065675 188065811 -15019721 + FLAM_C SINE Alu 1 133 0 1682 183 27 18 chr5 188068859 188069193 -15016339 + MER58B DNA MER1_type 3 339 -2 201 290 115 35 chr5 188069212 188069382 -15016150 + MIR SINE MIR 10 196 -66 234 415 0 13 chr5 188070964 188071116 -15014416 + MER5A DNA MER1_type 34 183 -6 265 170 0 0 chr5 188071389 188071436 -15014096 - MLT1G1 LTR MaLR -5 590 544 872 240 11 0 chr5 188071523 188071702 -15013830 + MER5A DNA MER1_type 4 184 -5 964 254 24 27 chr5 188071727 188072022 -15013510 - MLT1H LTR MaLR -255 294 1 1689 209 29 74 chr5 188072122 188072609 -15012923 - MLT1C LTR MaLR -2 465 1 223 146 36 0 chr5 188073167 188073222 -15012310 + (TTCA)n Simple_repeat Simple_repeat 1 57 0 332 264 118 34 chr5 188073226 188073404 -15012128 - L2 LINE L2 -5 3308 3116 185 295 87 34 chr5 188073700 188073849 -15011683 + MIR SINE MIR 99 255 -7 628 314 26 0 chr5 188074554 188074745 -15010787 - MIR SINE MIR -59 203 8 1944 107 55 0 chr5 188075644 188075916 -15009616 - AluSq SINE Alu -26 287 1 402 286 20 0 chr5 188076160 188076258 -15009274 - MIR3 SINE MIR -33 175 76 192 210 173 49 chr5 188076643 188076724 -15008808 + MIR SINE MIR 130 220 -42 204 97 0 0 chr5 188077091 188077122 -15008410 + (CA)n Simple_repeat Simple_repeat 1 31 0 183 129 0 0 chr5 188077301 188077332 -15008200 + (CA)n Simple_repeat Simple_repeat 2 32 0 228 192 19 19 chr5 188077552 188077604 -15007928 + CT-rich Low_complexity Low_complexity 3 54 0 1936 154 3 0 chr5 188079226 188079245 -15006287 - AluSx SINE Alu -13 299 282 459 0 0 0 chr5 188079245 188079296 -15006236 + (TG)n Simple_repeat Simple_repeat 1 51 0 1936 154 3 0 chr5 188079296 188079574 -15005958 - AluSx SINE Alu -30 282 1 371 304 0 26 chr5 188079780 188079895 -15005637 - L2 LINE L2 -27 3286 3175 195 235 0 0 chr5 188079946 188079997 -15005535 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 300 111 0 0 chr5 188080139 188080184 -15005348 + (CA)n Simple_repeat Simple_repeat 2 46 0 188 313 0 31 chr5 188080968 188081032 -15004500 + MER5B DNA MER1_type 117 178 0 673 335 69 36 chr5 188081382 188081465 -15004067 - L2 LINE L2 -1 3312 3233 291 54 0 0 chr5 188081465 188081502 -15004030 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 673 335 69 36 chr5 188081502 188081895 -15003637 - L2 LINE L2 -80 3233 2820 214 368 23 23 chr5 188082092 188082266 -15003266 + L3b LINE CR1 1152 1325 -258 803 284 50 0 chr5 188083111 188083312 -15002220 - MIR SINE MIR -41 221 11 183 80 0 0 chr5 188083408 188083433 -15002099 + (TCC)n Simple_repeat Simple_repeat 1 25 0 282 143 0 0 chr5 188083633 188083682 -15001850 + (CA)n Simple_repeat Simple_repeat 1 49 0 258 136 0 0 chr5 188084945 188084989 -15000543 + (TA)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr5 188085760 188085782 -14999750 + AT_rich Low_complexity Low_complexity 1 22 0 914 302 8 4 chr5 188085887 188086129 -14999403 + MIR SINE MIR 8 250 -12 976 175 53 0 chr5 188086219 188086408 -14999124 + MER20 DNA MER1_type 16 214 -5 198 272 48 39 chr5 188086419 188086522 -14999010 - MIR SINE MIR -89 173 70 2522 106 195 29 chr5 188086966 188087418 -14998114 + MER1A DNA MER1_type 1 527 0 198 152 0 0 chr5 188087573 188087606 -14997926 + L2 LINE L2 3262 3294 -19 484 233 187 20 chr5 188088635 188088785 -14996747 + MER5A DNA MER1_type 1 175 -14 669 298 16 28 chr5 188089042 188089286 -14996246 + MIR SINE MIR 20 262 0 941 211 29 5 chr5 188089376 188089584 -14995948 + MER20 DNA MER1_type 4 216 -3 2492 65 0 10 chr5 188091288 188091594 -14993938 + AluSq SINE Alu 11 313 0 562 299 91 42 chr5 188092210 188092221 -14993311 - L2 LINE L2 -9 3304 3295 1911 134 0 101 chr5 188092221 188092608 -14992924 + MER7A DNA MER2_type 1 346 0 562 299 91 42 chr5 188092608 188093151 -14992381 - L2 LINE L2 -18 3295 2658 226 290 95 24 chr5 188093349 188093518 -14992014 - MLT1H LTR MaLR -249 300 120 380 348 15 7 chr5 188093616 188093751 -14991781 - L2 LINE L2 -654 2660 2525 232 322 124 0 chr5 188094259 188094376 -14991156 - MIR SINE MIR -34 174 37 388 208 8 104 chr5 188097007 188097132 -14988400 - L2 LINE L2 -2 3311 3199 324 0 0 0 chr5 188097253 188097289 -14988243 + (TG)n Simple_repeat Simple_repeat 2 37 0 270 0 0 0 chr5 188097685 188097715 -14987817 + (T)n Simple_repeat Simple_repeat 1 30 0 185 333 95 0 chr5 188098003 188098087 -14987445 + MIR SINE MIR 91 182 -80 348 330 198 20 chr5 188098166 188098363 -14987169 - MIR SINE MIR -22 240 9 232 338 35 28 chr5 188098414 188098556 -14986976 - L2 LINE L2 -210 3062 2920 192 325 94 25 chr5 188099301 188099504 -14986028 - L2 LINE L2 -872 2442 2226 556 268 105 11 chr5 188099591 188099781 -14985751 - MIR SINE MIR -11 251 44 400 167 10 10 chr5 188101944 188102046 -14983486 + CT-rich Low_complexity Low_complexity 1 102 0 285 98 0 0 chr5 188102327 188102368 -14983164 + (A)n Simple_repeat Simple_repeat 1 41 0 2024 137 3 13 chr5 188109179 188109494 -14976038 + AluSx SINE Alu 1 312 0 276 247 25 0 chr5 188110046 188110127 -14975405 + (TA)n Simple_repeat Simple_repeat 1 83 0 342 0 0 0 chr5 188111945 188111983 -14973549 + (CA)n Simple_repeat Simple_repeat 2 39 0 367 240 55 98 chr5 188112300 188112483 -14973049 + L2 LINE L2 2910 3084 -188 1985 131 9 70 chr5 188112565 188113147 -14972385 - MER51A LTR ERV1 0 634 1 1605 81 5 0 chr5 188113156 188113366 -14972166 - AluY SINE Alu -2 309 99 340 325 0 43 chr5 188113374 188113491 -14972041 + L2 LINE L2 3199 3310 -3 187 333 0 53 chr5 188113898 188113973 -14971559 - L2 LINE L2 -22 3250 3180 40 49 0 0 chr5 188114165 188114226 -14971306 + AT_rich Low_complexity Low_complexity 1 61 0 1340 183 62 50 chr5 188114226 188114315 -14971217 - MER2 DNA MER2_type -1 343 257 1855 141 45 0 chr5 188114315 188114605 -14970927 + AluJb SINE Alu 1 303 -9 1340 183 62 50 chr5 188114605 188114854 -14970678 - MER2 DNA MER2_type -87 257 1 2026 141 7 3 chr5 188117390 188117688 -14967844 + AluSx SINE Alu 1 299 -13 262 217 65 0 chr5 188118039 188118131 -14967401 - L1ME4a LINE L1 -5 6116 6019 180 0 0 0 chr5 188118134 188118154 -14967378 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 32 26 0 0 chr5 188118327 188118366 -14967166 + AT_rich Low_complexity Low_complexity 1 39 0 322 231 68 48 chr5 188119640 188119787 -14965745 - MER103 DNA DNA -1 165 16 215 321 0 12 chr5 188120101 188120182 -14965350 + MIR SINE MIR 72 151 -111 216 326 98 0 chr5 188123766 188123898 -14961634 - MIR3 SINE MIR -6 202 58 180 243 0 0 chr5 188124717 188124754 -14960778 - MIR SINE MIR -62 146 110 21 0 0 0 chr5 188124960 188124981 -14960551 + AT_rich Low_complexity Low_complexity 1 21 0 2478 70 0 10 chr5 188124984 188125298 -14960234 + AluY SINE Alu 1 311 0 2078 118 0 53 chr5 188125628 188125951 -14959581 - AluSx SINE Alu -2 310 5 1630 126 5 0 chr5 188128338 188128560 -14956972 + AluSq SINE Alu 1 223 -90 463 281 23 0 chr5 188129446 188129574 -14955958 - L2 LINE L2 0 3313 3183 758 205 40 35 chr5 188129692 188129892 -14955640 + MER3 DNA MER1_type 7 207 -2 259 360 0 10 chr5 188130385 188130485 -14955047 + GA-rich Low_complexity Low_complexity 1 99 0 184 336 83 80 chr5 188131168 188131641 -14953891 - L2 LINE L2 -52 3261 2789 1867 173 10 3 chr5 188131874 188132169 -14953363 + AluJo SINE Alu 1 297 -15 251 360 71 53 chr5 188133436 188133719 -14951813 - L2 LINE L2 -340 2974 2687 26 30 0 0 chr5 188133749 188133782 -14951750 + AT_rich Low_complexity Low_complexity 1 33 0 210 348 44 51 chr5 188134287 188134445 -14951087 + MER5B DNA MER1_type 2 158 -20 190 284 90 15 chr5 188134502 188134569 -14950963 - MIR SINE MIR -121 87 16 1060 187 44 110 chr5 188134688 188135078 -14950454 - MLT1A2 LTR MaLR -7 367 4 400 234 11 21 chr5 188135089 188135183 -14950349 - MER5B DNA MER1_type -2 176 84 334 225 0 12 chr5 188135519 188135599 -14949933 - Charlie8 DNA MER1_type -1 2416 2338 310 226 20 59 chr5 188135783 188135885 -14949647 - Charlie8 DNA MER1_type -2247 170 73 310 254 209 9 chr5 188136182 188136292 -14949240 - L2 LINE L2 -2 3270 3139 262 256 103 0 chr5 188137655 188137733 -14947799 - MIR SINE MIR -109 153 68 228 35 0 0 chr5 188137943 188137972 -14947560 + (A)n Simple_repeat Simple_repeat 1 29 0 4142 173 44 28 chr5 188138206 188139041 -14946491 - MER21B LTR ERV1 -1 862 14 234 299 15 0 chr5 188139375 188139442 -14946090 - L2 LINE L2 -3 3310 3243 1986 153 73 0 chr5 188140056 188140396 -14945136 - MLT1A1 LTR MaLR 0 365 1 208 313 138 36 chr5 188140418 188140613 -14944919 - MIR SINE MIR -27 235 21 749 273 23 0 chr5 188141574 188141750 -14943782 + MIR SINE MIR 5 184 -78 374 294 80 31 chr5 188141784 188141947 -14943585 - MIR SINE MIR -36 226 56 189 171 0 0 chr5 188145105 188145140 -14940392 + GA-rich Low_complexity Low_complexity 1 35 0 763 222 51 7 chr5 188145702 188145916 -14939616 + L1MD3 LINE L1 6137 7984 -11 194 304 36 0 chr5 188146267 188146323 -14939209 + L2 LINE L2 3215 3272 0 180 243 200 14 chr5 188146593 188146663 -14938869 - MIR SINE MIR 0 262 180 308 189 21 105 chr5 188146695 188146790 -14938742 - MIR SINE MIR -162 100 14 223 293 207 33 chr5 188146846 188146996 -14938536 - MER5B DNA MER1_type -1 177 2 325 243 73 29 chr5 188147450 188147586 -14937946 - Charlie8 DNA MER1_type -2159 258 117 535 275 63 16 chr5 188147927 188148116 -14937416 + MIR SINE MIR 18 215 -47 198 0 0 0 chr5 188149006 188149028 -14936504 + (T)n Simple_repeat Simple_repeat 1 22 0 621 309 88 33 chr5 188149538 188149977 -14935555 - L2 LINE L2 0 3313 2782 219 324 162 9 chr5 188150093 188150198 -14935334 + L2 LINE L2 3147 3267 -5 372 296 35 49 chr5 188150213 188150355 -14935177 + MER5A DNA MER1_type 10 149 -40 4154 139 31 11 chr5 188152316 188153033 -14932499 + L1PA16 LINE L1 5432 6162 -4 2046 232 51 24 chr5 188154069 188154621 -14930911 - MLT1F1 LTR MaLR 0 567 1 343 287 30 43 chr5 188154952 188155116 -14930416 - MER5A DNA MER1_type 0 189 28 * 364 304 36 22 chr5 188154985 188155123 -14930409 + MER5A DNA MER1_type 44 183 -6 2151 125 3 0 chr5 188156016 188156313 -14929219 - AluSx SINE Alu -14 298 1 306 294 131 20 chr5 188157079 188157232 -14928300 + MIR SINE MIR 1 170 -92 399 284 222 0 chr5 188157448 188157624 -14927908 - MIR SINE MIR -1 261 47 762 243 64 5 chr5 188157672 188157874 -14927658 + MIR SINE MIR 47 260 -2 329 145 16 0 chr5 188158331 188158393 -14927139 + GA-rich Low_complexity Low_complexity 3 65 0 440 204 34 0 chr5 188158427 188158515 -14927017 - Tigger7 DNA MER2_type -1 2486 2396 * 2508 198 16 14 chr5 188158514 188159028 -14926504 - Tigger7 DNA MER2_type -212 521 7 667 289 71 91 chr5 188159468 188159987 -14925545 - L2 LINE L2 0 3313 2805 411 281 82 63 chr5 188160199 188160469 -14925063 + L2 LINE L2 3021 3295 -18 251 304 0 0 chr5 188161170 188161226 -14924306 + L2 LINE L2 3202 3257 -15 220 304 0 54 chr5 188161496 188161588 -14923944 - L2 LINE L2 -938 2376 2290 227 261 0 0 chr5 188162122 188162168 -14923364 + polypyrimidine Low_complexity Low_complexity 3 48 0 390 266 9 71 chr5 188162958 188163071 -14922461 - MIR SINE MIR -86 122 17 195 162 0 0 chr5 188163834 188163871 -14921661 + T-rich Low_complexity Low_complexity 4 40 0 2720 32 0 0 chr5 188164091 188164400 -14921132 - AluY SINE Alu -2 309 1 197 56 0 56 chr5 188164463 188164499 -14921033 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 465 310 39 61 chr5 188165385 188165614 -14919918 + MIR SINE MIR 6 229 -33 197 353 68 23 chr5 188165718 188165851 -14919681 - L2 LINE L2 -202 3070 2932 4277 51 16 0 chr5 188165898 188166444 -14919088 + L1PA8 LINE L1 5613 6167 -5 396 0 0 0 chr5 188166547 188166591 -14918941 + (TG)n Simple_repeat Simple_repeat 2 45 0 657 308 163 26 chr5 188167819 188168321 -14917211 + L2 LINE L2 2689 3311 -2 384 269 62 50 chr5 188168340 188168500 -14917032 - MIR3 SINE MIR -24 184 23 234 262 66 90 chr5 188168632 188168754 -14916778 + MIR SINE MIR 73 191 -71 2308 96 3 7 chr5 188168782 188169085 -14916447 + AluSq SINE Alu 1 302 -11 396 71 0 0 chr5 188169279 188169335 -14916197 + (TA)n Simple_repeat Simple_repeat 2 57 0 892 200 28 11 chr5 188169350 188169530 -14916002 + MER5A DNA MER1_type 2 184 -5 517 228 37 76 chr5 188170042 188170288 -14915244 + MIR SINE MIR 6 243 -19 2406 88 0 0 chr5 188170289 188170585 -14914947 + AluSg SINE Alu 1 296 -14 1128 224 30 53 chr5 188171523 188171916 -14913616 - L1MB8 LINE L1 0 6178 5795 634 302 18 6 chr5 188173027 188173196 -14912336 - MIR SINE MIR -91 171 1 1721 161 66 27 chr5 188173256 188173591 -14911941 - MER7A DNA MER2_type 0 346 1 453 193 22 0 chr5 188174520 188174655 -14910877 + (TA)n Simple_repeat Simple_repeat 2 139 0 2257 91 0 3 chr5 188175764 188176061 -14909471 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr5 188176752 188176776 -14908756 + AT_rich Low_complexity Low_complexity 1 24 0 324 299 0 0 chr5 188180109 188180196 -14905336 + MIR SINE MIR 34 120 -88 231 276 216 0 chr5 188180329 188180445 -14905087 + MIR SINE MIR 3 143 -119 290 331 16 41 chr5 188180645 188180766 -14904766 + L2 LINE L2 2671 2788 -526 198 128 0 0 chr5 188181568 188181607 -14903925 + (CA)n Simple_repeat Simple_repeat 2 40 0 792 242 6 6 chr5 188181681 188181846 -14903686 - AluJo/FRAM SINE Alu -1 301 137 800 250 11 5 chr5 188181846 188181861 -14903671 - AluJb SINE Alu -12 300 121 709 310 116 16 chr5 188182059 188182378 -14903154 + MLT1K LTR MaLR 66 416 -172 530 236 106 25 chr5 188182730 188182891 -14902641 - MER96 DNA MER1_type -1 174 1 21 57 0 0 chr5 188183363 188183398 -14902134 + AT_rich Low_complexity Low_complexity 1 35 0 462 262 107 48 chr5 188184306 188184474 -14901058 + MER45A DNA AcHobo 1 178 0 351 288 19 44 chr5 188184807 188184967 -14900565 - L2 LINE L2 -377 2937 2782 4085 132 11 40 chr5 188185247 188186007 -14899525 - L1MA5A LINE L1 -1 6296 5559 358 262 45 127 chr5 188186041 188186285 -14899247 - MER58A DNA MER1_type 0 224 1 303 317 6 94 chr5 188186299 188186447 -14899085 + MER5A DNA MER1_type 26 157 -32 1344 195 112 35 chr5 188186447 188186637 -14898895 - MLT1A1 LTR MaLR 0 365 191 1772 139 8 0 chr5 188186637 188186903 -14898629 - AluSq SINE Alu -14 299 32 1344 195 112 35 chr5 188186903 188187051 -14898481 - MLT1A1 LTR MaLR -174 191 1 303 317 6 94 chr5 188187051 188187082 -14898450 + MER5A DNA MER1_type 157 189 0 2231 100 0 16 chr5 188188609 188188920 -14896612 + AluY SINE Alu 3 308 -3 347 229 42 10 chr5 188189024 188189120 -14896412 - MER103 DNA DNA -30 136 38 192 197 115 33 chr5 188189321 188189382 -14896150 - L2 LINE L2 -2 3270 3205 206 190 69 17 chr5 188189807 188189865 -14895667 + MIR3 SINE MIR 105 165 -43 804 288 138 37 chr5 188190169 188190634 -14894898 - MLT1K LTR MaLR -74 514 3 435 263 9 0 chr5 188190798 188190912 -14894620 - MER94 DNA DNA -15 119 5 394 182 205 34 chr5 188191240 188191395 -14894137 + MER5A DNA MER1_type 4 188 -1 482 107 0 12 chr5 188191583 188191667 -14893865 + (GA)n Simple_repeat Simple_repeat 2 84 0 208 220 80 20 chr5 188191671 188191721 -14893811 + MER5B DNA MER1_type 60 112 -66 936 278 100 55 chr5 188192099 188192786 -14892746 - L1MEd LINE L1 -4970 1149 432 277 288 85 25 chr5 188192886 188193004 -14892528 - MIR SINE MIR -64 144 20 618 325 43 22 chr5 188193515 188193746 -14891786 + MIR SINE MIR 3 238 -24 263 220 0 0 chr5 188194890 188194940 -14890592 + MIR SINE MIR 100 149 -113 27 49 0 0 chr5 188195002 188195043 -14890489 + AT_rich Low_complexity Low_complexity 1 41 0 402 232 11 32 chr5 188195366 188195461 -14890071 + MER81 DNA DNA 1 93 -21 459 295 82 77 chr5 188195773 188196139 -14889393 - MLT1L LTR MaLR -245 370 3 1833 155 7 3 chr5 188197148 188197445 -14888087 + AluSx SINE Alu 7 304 -8 200 310 101 51 chr5 188199693 188199851 -14885681 + MER5A DNA MER1_type 21 186 -3 220 111 37 0 chr5 188200023 188200077 -14885455 + (TA)n Simple_repeat Simple_repeat 2 57 0 335 315 0 0 chr5 188200198 188200306 -14885226 - MIR SINE MIR -1 261 154 237 213 40 27 chr5 188200506 188200581 -14884951 + L1MC4 LINE L1 6628 6703 -1339 30 0 0 0 chr5 188201467 188201497 -14884035 + AT_rich Low_complexity Low_complexity 1 30 0 512 242 94 7 chr5 188202854 188203003 -14882529 + MIR SINE MIR 53 214 -48 249 317 164 0 chr5 188203929 188204033 -14881499 + MIR SINE MIR 51 171 -91 214 167 15 30 chr5 188205978 188206044 -14879488 + (TA)n Simple_repeat Simple_repeat 2 66 0 621 299 58 23 chr5 188206168 188206566 -14878966 + L1ME4a LINE L1 5708 6119 -2 218 321 151 25 chr5 188208816 188208975 -14876557 - L2 LINE L2 -575 2739 2561 496 256 89 21 chr5 188209503 188209784 -14875748 - L1MC4a LINE L1 -1828 5980 5681 383 287 25 6 chr5 188209835 188209992 -14875540 + (TA)n Simple_repeat Simple_repeat 2 161 0 497 204 20 0 chr5 188209993 188210091 -14875441 - L1MC4a LINE L1 -532 5589 5490 225 132 0 0 chr5 188210227 188210265 -14875267 + (TG)n Simple_repeat Simple_repeat 1 38 0 717 162 0 0 chr5 188210319 188210473 -14875059 + CT-rich Low_complexity Low_complexity 1 154 0 2028 125 45 0 chr5 188210473 188210761 -14874771 - AluSx SINE Alu -11 301 1 465 181 223 0 chr5 188210967 188211061 -14874471 - MER1B DNA MER1_type -180 117 3 332 324 82 48 chr5 188213045 188213252 -14872280 - MIR SINE MIR 0 262 49 669 267 117 0 chr5 188214200 188214406 -14871126 + MIR SINE MIR 8 237 -25 276 143 0 54 chr5 188215140 188215196 -14870336 - MADE1 DNA Mariner 0 80 28 408 315 30 82 chr5 188216079 188216271 -14869261 - L1ME4a LINE L1 -3 6118 5956 379 260 120 41 chr5 188216271 188216513 -14869019 - MIR SINE MIR 0 262 2 408 315 30 82 chr5 188216513 188216723 -14868809 - L1ME4a LINE L1 -165 5956 5737 1626 271 24 4 chr5 188217360 188217811 -14867721 - LTR16B LTR ERVL -2 462 3 1218 109 6 6 chr5 188218052 188218226 -14867306 - AluSg/x SINE Alu -3 309 136 180 0 0 0 chr5 188218401 188218421 -14867111 + (T)n Simple_repeat Simple_repeat 1 20 0 22 56 0 0 chr5 188218556 188218592 -14866940 + AT_rich Low_complexity Low_complexity 1 36 0 194 308 39 0 chr5 188218593 188218671 -14866861 - MIR SINE MIR -67 141 61 322 313 78 17 chr5 188218815 188218930 -14866602 + MIR3 SINE MIR 41 162 -46 256 224 71 59 chr5 188218932 188219102 -14866430 + MER113 DNA MER1_type? 6 177 -344 246 219 0 0 chr5 188219138 188219202 -14866330 + (TA)n Simple_repeat Simple_repeat 2 65 0 396 0 0 0 chr5 188219214 188219258 -14866274 + (TG)n Simple_repeat Simple_repeat 2 45 0 321 228 25 0 chr5 188219283 188219362 -14866170 + MER113 DNA MER1_type? 341 421 -100 426 236 123 64 chr5 188220343 188220563 -14864969 + L2 LINE L2 3077 3309 -4 355 304 38 32 chr5 188220605 188220763 -14864769 - MER5B DNA MER1_type -3 175 17 264 345 89 18 chr5 188221241 188221409 -14864123 + MIR SINE MIR 2 181 -81 509 211 170 0 chr5 188222531 188222678 -14862854 - MER5B DNA MER1_type -3 175 4 1415 174 61 3 chr5 188223485 188223779 -14861753 - MER58B DNA MER1_type -1 340 30 472 246 95 77 chr5 188223794 188224041 -14861491 - MER113 DNA MER1_type? -150 371 115 2498 68 7 0 chr5 188224041 188224348 -14861184 + AluY SINE Alu 1 309 -2 472 246 95 77 chr5 188224348 188224437 -14861095 - MER113 DNA MER1_type? -406 115 29 185 287 68 80 chr5 188225112 188225363 -14860169 + L2 LINE L2 2638 2885 -429 364 287 0 41 chr5 188225365 188225487 -14860045 - MER20 DNA MER1_type -96 123 7 543 338 107 6 chr5 188225493 188225821 -14859711 + L2 LINE L2 2953 3313 0 2193 87 21 0 chr5 188225827 188226113 -14859419 - AluSq SINE Alu -21 292 1 2271 91 3 0 chr5 188226961 188227270 -14858262 - AluY SINE Alu -1 310 1 548 295 45 29 chr5 188228050 188228294 -14857238 - MIR SINE MIR -13 249 2 217 337 23 12 chr5 188228587 188228673 -14856859 - MIR SINE MIR -2 260 174 302 250 80 10 chr5 188228692 188228792 -14856740 + MER91C DNA MER1_type 20 126 -14 292 230 11 35 chr5 188228818 188228905 -14856627 - MIR SINE MIR -174 88 4 234 0 0 0 chr5 188229239 188229265 -14856267 + (A)n Simple_repeat Simple_repeat 1 26 0 490 272 40 50 chr5 188229835 188230037 -14855495 + MIR SINE MIR 63 262 0 249 80 0 0 chr5 188230836 188230886 -14854646 + LTR66 LTR ERVL 394 443 -167 2077 101 0 25 chr5 188230920 188231259 -14854273 - AluSg SINE Alu 0 332 1 226 271 0 0 chr5 188231301 188231360 -14854172 + CT-rich Low_complexity Low_complexity 1 59 0 2078 131 7 0 chr5 188231546 188231844 -14853688 + AluSq SINE Alu 1 300 -13 1324 188 21 14 chr5 188234023 188234141 -14851391 - L1MA9 LINE L1 -270 6042 5925 350 271 67 39 chr5 188234141 188234396 -14851136 - L1PB4 LINE L1 -231 5925 5664 366 148 40 57 chr5 188234423 188234599 -14850933 + (TA)n Simple_repeat Simple_repeat 2 174 0 * 371 215 34 40 chr5 188234517 188234694 -14850838 + (TATAA)n Simple_repeat Simple_repeat 4 179 0 2981 152 6 44 chr5 188234748 188235029 -14850503 - L1M2 LINE L1 -519 5793 5503 2645 39 0 3 chr5 188235029 188235335 -14850197 + AluY SINE Alu 1 305 -6 2981 152 6 44 chr5 188235335 188235790 -14849742 - L1M2 LINE L1 -809 5503 5078 638 227 0 0 chr5 188235790 188235921 -14849611 + L1MA10 LINE L1 6202 6333 -1 308 269 8 50 chr5 188236369 188236488 -14849044 + MER117 DNA MER1_type 4 117 -80 207 0 0 0 chr5 188236530 188236553 -14848979 + (GA)n Simple_repeat Simple_repeat 1 23 0 746 264 90 33 chr5 188236676 188236975 -14848557 + MLT1J2 LTR MaLR 3 318 -132 234 237 0 0 chr5 188238101 188238177 -14847355 + GA-rich Low_complexity Low_complexity 1 76 0 194 189 0 38 chr5 188238508 188238561 -14846971 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 441 335 49 73 chr5 188238696 188239201 -14846331 - L2 LINE L2 -178 3094 2593 212 274 32 16 chr5 188239244 188239306 -14846226 - L2 LINE L2 0 3313 3251 * 486 299 99 10 chr5 188239281 188239482 -14846050 - MIR SINE MIR -32 230 12 245 257 0 40 chr5 188240755 188240829 -14844703 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 227 388 11 6 chr5 188241191 188241369 -14844163 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 373 330 6 33 chr5 188241330 188241512 -14844020 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1713 139 43 32 chr5 188244605 188244964 -14840568 - AluSx SINE Alu 0 362 1 30 45 0 0 chr5 188245275 188245319 -14840213 + AT_rich Low_complexity Low_complexity 1 44 0 259 302 132 0 chr5 188245360 188245489 -14840043 + MIR SINE MIR 5 150 -112 212 236 36 18 chr5 188245502 188245557 -14839975 + L2 LINE L2 3153 3208 -64 297 204 62 58 chr5 188247519 188247650 -14837882 + MIR SINE MIR 21 150 -62 423 276 70 38 chr5 188248018 188248203 -14837329 + MIR SINE MIR 72 262 0 974 194 36 50 chr5 188248920 188249142 -14836390 + MER20 DNA MER1_type 1 219 0 1936 233 28 28 chr5 188250551 188251045 -14834487 - MLT1D LTR MaLR -8 497 4 304 280 114 15 chr5 188251999 188252131 -14833401 + L2 LINE L2 2802 2946 -368 514 301 121 11 chr5 188252142 188252477 -14833055 + L2 LINE L2 2636 3011 -302 281 243 86 14 chr5 188252479 188252549 -14832983 + L2 LINE L2 3238 3312 -1 330 240 100 30 chr5 188253030 188253130 -14832402 + MIR SINE MIR 66 172 -90 759 297 88 44 chr5 188253134 188253654 -14831878 - L2 LINE L2 0 3313 2778 22 35 0 0 chr5 188253882 188253911 -14831621 + AT_rich Low_complexity Low_complexity 1 29 0 183 297 68 0 chr5 188254096 188254170 -14831362 + L3b LINE CR1 1417 1495 -88 187 295 147 16 chr5 188254235 188254364 -14831168 + L2 LINE L2 2497 2642 -672 323 310 87 87 chr5 188254452 188254900 -14830632 + L2 LINE L2 2817 3264 -8 1749 199 3 0 chr5 188255178 188255489 -14830043 - AluJb SINE Alu 0 312 1 2524 58 0 10 chr5 188255831 188256142 -14829390 - AluY SINE Alu -3 308 1 401 284 114 47 chr5 188256364 188256600 -14828932 - MIR SINE MIR -8 254 3 1647 136 36 32 chr5 188257051 188257330 -14828202 + AluJo SINE Alu 1 280 -32 315 71 0 0 chr5 188257332 188257374 -14828158 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 22 35 0 0 chr5 188260417 188260446 -14825086 + AT_rich Low_complexity Low_complexity 1 29 0 1171 138 16 113 chr5 188260688 188260979 -14824553 + AluJo SINE Alu 63 329 0 22 35 0 0 chr5 188261449 188261478 -14824054 + AT_rich Low_complexity Low_complexity 1 29 0 301 389 0 13 chr5 188261865 188262022 -14823510 - MIR3 SINE MIR -5 203 49 294 0 65 0 chr5 188262760 188262806 -14822726 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1356 231 117 28 chr5 188263462 188263934 -14821598 - L1MB8 LINE L1 -6 6172 5659 360 0 0 0 chr5 188264633 188264673 -14820859 + (GA)n Simple_repeat Simple_repeat 2 41 0 246 105 0 0 chr5 188264768 188264806 -14820726 + (TG)n Simple_repeat Simple_repeat 1 38 0 352 302 134 0 chr5 188264852 188265024 -14820508 - L2 LINE L2 0 3313 3119 1373 205 14 40 chr5 188266346 188266527 -14819005 - AluJo SINE Alu -23 289 118 2228 149 36 14 chr5 188266527 188266890 -14818642 - THE1C LTR MaLR -2 373 3 1373 205 14 40 chr5 188266890 188267005 -14818527 - AluJo SINE Alu -194 118 1 2192 119 0 0 chr5 188267316 188267609 -14817923 + AluSg SINE Alu 1 293 -17 212 246 14 14 chr5 188268112 188268181 -14817351 + MIR SINE MIR 181 249 -13 416 318 35 86 chr5 188269029 188269344 -14816188 - L2 LINE L2 -400 2914 2616 220 333 42 0 chr5 188269385 188269457 -14816075 - L2 LINE L2 -94 3178 3104 222 118 0 0 chr5 188269911 188269945 -14815587 + (CA)n Simple_repeat Simple_repeat 2 35 0 2020 125 0 59 chr5 188270050 188270371 -14815161 - AluSx SINE Alu -10 302 1 214 296 167 9 chr5 188270648 188270756 -14814776 + MIR3 SINE MIR 60 184 -24 858 357 66 13 chr5 188271001 188271458 -14814074 + L3 LINE CR1 993 1473 -104 802 208 26 0 chr5 188271495 188271649 -14813883 - MIR SINE MIR -56 206 49 23 0 0 0 chr5 188272567 188272590 -14812942 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr5 188273420 188273459 -14812073 + AT_rich Low_complexity Low_complexity 1 39 0 339 285 94 43 chr5 188273951 188274115 -14811417 - MIR SINE MIR -62 146 21 246 227 0 0 chr5 188274984 188275050 -14810482 + T-rich Low_complexity Low_complexity 1 66 0 6355 55 0 7 chr5 188275051 188275798 -14809734 - L1PA7 LINE L1 -3 6151 5410 216 353 25 17 chr5 188276100 188276219 -14809313 - MIR3 SINE MIR -3 205 86 474 257 87 27 chr5 188276231 188276414 -14809118 + LTR33 LTR ERVL 1 194 -327 463 198 27 18 chr5 188276728 188276839 -14808693 + LTR33 LTR ERVL 410 521 0 334 219 135 31 chr5 188276993 188277089 -14808443 + MIR SINE MIR 1 106 -156 538 290 65 37 chr5 188277116 188277333 -14808199 + MIR SINE MIR 39 261 -1 2236 92 11 0 chr5 188278628 188278911 -14806621 - AluSx SINE Alu -26 286 1 478 273 88 34 chr5 188279154 188279359 -14806173 + L2 LINE L2 3078 3293 -20 200 35 35 0 chr5 188280082 188280111 -14805421 + (TC)n Simple_repeat Simple_repeat 1 30 0 325 366 83 58 chr5 188283858 188284414 -14801118 - L2 LINE L2 -8 3305 2736 2949 197 12 14 chr5 188284473 188284555 -14800977 + L1MB3 LINE L1 5453 5534 -649 2400 99 0 6 chr5 188284555 188284869 -14800663 + AluSx SINE Alu 1 312 0 2949 197 12 14 chr5 188284869 188285474 -14800058 + L1MB3 LINE L1 5534 6109 -74 230 369 102 0 chr5 188285640 188285797 -14799735 - L2 LINE L2 -644 2670 2498 830 285 16 4 chr5 188286631 188286887 -14798645 + MIR SINE MIR 4 262 0 361 238 33 66 chr5 188288132 188288254 -14797278 - L2 LINE L2 -13 3300 3183 218 260 200 27 chr5 188288473 188288623 -14796909 - MIR SINE MIR -36 226 51 258 219 0 47 chr5 188289116 188289180 -14796352 + GA-rich Low_complexity Low_complexity 3 63 0 24 32 0 0 chr5 188290337 188290368 -14795164 + AT_rich Low_complexity Low_complexity 1 31 0 2403 85 7 0 chr5 188293036 188293341 -14792191 - AluSp SINE Alu -6 307 1 268 343 84 42 chr5 188293691 188293857 -14791675 - L2 LINE L2 -2 3270 3098 235 259 0 17 chr5 188293952 188294010 -14791522 + L2 LINE L2 3216 3272 0 252 234 120 11 chr5 188294023 188294207 -14791325 + L1ME4a LINE L1 5712 5915 -206 342 0 0 0 chr5 188294236 188294274 -14791258 + (CA)n Simple_repeat Simple_repeat 1 38 0 2151 129 10 0 chr5 188294397 188294706 -14790826 + AluJb SINE Alu 1 312 0 216 67 0 0 chr5 188294709 188294739 -14790793 + (TA)n Simple_repeat Simple_repeat 2 31 0 308 250 54 34 chr5 188295308 188295456 -14790076 + L1ME4a LINE L1 5964 6114 -7 30 45 0 0 chr5 188295462 188295506 -14790026 + AT_rich Low_complexity Low_complexity 1 44 0 596 329 40 32 chr5 188295559 188295811 -14789721 + MIR SINE MIR 4 257 -5 857 182 64 50 chr5 188295969 188296189 -14789343 + MER58A DNA MER1_type 2 224 0 500 296 17 11 chr5 188298106 188298282 -14787250 - MER113 DNA MER1_type? -6 515 339 3536 192 3 8 chr5 188298291 188298946 -14786586 - MER82 DNA MER2_type 0 653 2 1628 184 0 0 chr5 188299103 188299364 -14786168 + AluJb SINE Alu 1 261 -51 253 186 85 62 chr5 188299408 188299537 -14785995 - MER113 DNA MER1_type? -365 156 25 1592 171 66 0 chr5 188299818 188300104 -14785428 + AluJb SINE Alu 1 305 -7 2477 84 3 0 chr5 188300106 188300414 -14785118 + AluSp SINE Alu 1 309 -4 197 116 0 23 chr5 188301247 188301290 -14784242 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 381 143 0 0 chr5 188301873 188301950 -14783582 + GSATX Satellite centromeric 67 143 -75 495 300 22 66 chr5 188302208 188302435 -14783097 + MIR SINE MIR 17 233 -29 194 226 16 65 chr5 188302600 188302662 -14782870 - L2 LINE L2 -67 3246 3188 616 300 39 35 chr5 188304432 188304689 -14780843 - MLT1K LTR MaLR -168 420 163 184 367 46 28 chr5 188305060 188305169 -14780363 - MIR SINE MIR -26 236 126 466 342 29 40 chr5 188305623 188305895 -14779637 - MLT1K LTR MaLR -251 337 69 189 321 131 0 chr5 188305930 188306014 -14779518 - MIR SINE MIR -95 113 19 226 323 238 37 chr5 188306196 188306385 -14779147 + MIR SINE MIR 9 235 -27 191 368 79 0 chr5 188307106 188307182 -14778350 + L2 LINE L2 3155 3236 -36 318 277 36 0 chr5 188307810 188307893 -14777639 + MIR SINE MIR 3 88 -174 217 277 0 0 chr5 188307943 188307990 -14777542 + MIR SINE MIR 206 252 -10 476 79 86 0 chr5 188309491 188309643 -14775889 + (TA)n Simple_repeat Simple_repeat 1 165 0 333 294 59 109 chr5 188309789 188310194 -14775338 + Charlie8 DNA MER1_type 38 422 -1995 575 242 22 82 chr5 188311255 188311507 -14774025 + MIR SINE MIR 30 262 0 2179 116 20 3 chr5 188311627 188311928 -14773604 + AluJb SINE Alu 1 306 -6 813 197 132 0 chr5 188312873 188313101 -14772431 + L1MD3 LINE L1 7733 7990 -5 309 310 220 22 chr5 188314211 188314619 -14770913 + L2 LINE L2 2590 3066 -206 237 65 0 0 chr5 188314684 188314715 -14770817 + (TG)n Simple_repeat Simple_repeat 1 31 0 285 210 97 0 chr5 188315229 188315291 -14770241 - Charlie8 DNA MER1_type -2210 207 140 347 245 183 62 chr5 188316065 188316273 -14769259 - MIR SINE MIR -1 261 29 417 236 24 8 chr5 188317354 188317477 -14768055 - MER113 DNA MER1_type? -48 473 349 389 207 53 47 chr5 188317481 188317650 -14767882 - MER113 DNA MER1_type? -284 237 68 361 203 23 83 chr5 188317957 188318090 -14767442 - MER5A DNA MER1_type -25 164 40 208 320 32 16 chr5 188317990 188318115 -14767417 + MER5A DNA MER1_type 63 189 0 * 186 43 0 0 chr5 188319196 188319219 -14766313 + (A)n Simple_repeat Simple_repeat 1 23 0 390 42 0 0 chr5 188319219 188319267 -14766265 + (TA)n Simple_repeat Simple_repeat 2 49 0 281 363 48 8 chr5 188319443 188319567 -14765965 - L2 LINE L2 -28 3244 3116 1445 187 61 47 chr5 188319965 188319995 -14765537 - MLT1A1 LTR MaLR -1 364 336 330 67 0 0 chr5 188319995 188320040 -14765492 + (CA)n Simple_repeat Simple_repeat 2 46 0 1445 187 61 47 chr5 188320040 188320368 -14765164 - MLT1A1 LTR MaLR -29 336 1 198 209 0 0 chr5 188321779 188321822 -14763710 + CT-rich Low_complexity Low_complexity 3 45 0 260 273 21 0 chr5 188321860 188321967 -14763565 - L1MB7 LINE L1 -11 6169 6059 1169 199 26 0 chr5 188322044 188322270 -14763262 + MER46A DNA MER2_type 3 234 -2 449 275 137 28 chr5 188322639 188322821 -14762711 - MIR SINE MIR -43 219 18 193 313 72 60 chr5 188323378 188323544 -14761988 - MER5B DNA MER1_type -3 175 8 204 252 290 9 chr5 188323544 188323651 -14761881 + L2 LINE L2 3175 3311 -2 237 293 9 47 chr5 188324353 188324459 -14761073 - MIR SINE MIR -2 260 159 236 307 188 10 chr5 188324537 188324729 -14760803 - MLT1K LTR MaLR -91 497 272 1584 251 37 74 chr5 188324783 188325349 -14760183 - MER77 LTR ERV1 -7 598 54 23 0 0 0 chr5 188325723 188325746 -14759786 + AT_rich Low_complexity Low_complexity 1 23 0 712 221 21 0 chr5 188325900 188326045 -14759487 + MER5B DNA MER1_type 1 148 -30 291 253 40 13 chr5 188326262 188326337 -14759195 + MIR SINE MIR 74 150 -112 2025 145 0 0 chr5 188326353 188326659 -14758873 - AluSx SINE Alu 0 312 6 417 309 0 17 chr5 188326992 188327173 -14758359 - MER104 DNA MER2_type -2 178 1 622 281 24 19 chr5 188379591 188379817 -14705715 + MIR SINE MIR 38 262 0 2024 125 11 0 chr5 188379891 188380017 -14705515 + AluSx SINE Alu 1 124 -188 279 0 0 0 chr5 188380017 188380048 -14705484 + (CA)n Simple_repeat Simple_repeat 2 32 0 2024 125 11 0 chr5 188380048 188380200 -14705332 + AluSx SINE Alu 124 282 -30 26 0 0 0 chr5 188380202 188380228 -14705304 + AT_rich Low_complexity Low_complexity 1 26 0 221 255 75 66 chr5 188380274 188380380 -14705152 - MIR SINE MIR -83 125 19 318 279 38 0 chr5 188381068 188381147 -14704385 - MIR SINE MIR -145 117 36 487 238 14 34 chr5 188381274 188381421 -14704111 + MIR SINE MIR 102 245 -17 1745 177 27 0 chr5 188381836 188382130 -14703402 - AluJb SINE Alu -10 302 1 2190 127 3 0 chr5 188382773 188383073 -14702459 + AluSx SINE Alu 1 301 -11 901 205 113 0 chr5 188383371 188383556 -14701976 - MER3 DNA MER1_type 0 209 4 1171 161 101 0 chr5 188384652 188384851 -14700681 - MER20 DNA MER1_type 0 219 1 36 87 0 0 chr5 188384915 188385007 -14700525 + AT_rich Low_complexity Low_complexity 1 92 0 2208 106 10 7 chr5 188385013 188385314 -14700218 + AluSx SINE Alu 1 302 -10 387 272 196 16 chr5 188385475 188385659 -14699873 - MIR SINE MIR -25 237 21 514 320 35 15 chr5 188386915 188387115 -14698417 + MIR SINE MIR 1 204 -58 216 97 0 0 chr5 188387115 188387146 -14698386 + (TA)n Simple_repeat Simple_repeat 1 31 0 236 133 0 0 chr5 188387147 188387192 -14698340 - LTR66 LTR ERVL -172 438 394 540 230 55 24 chr5 188387781 188387946 -14697586 - MER117 DNA MER1_type 0 197 28 1531 163 90 4 chr5 188388573 188388850 -14696682 + AluJb SINE Alu 6 306 -6 1161 89 4 4 chr5 188388853 188389112 -14696420 + (GAAA)n Simple_repeat Simple_repeat 1 259 0 609 197 77 124 chr5 188389933 188390166 -14695366 + MIR SINE MIR 13 234 -28 338 256 73 0 chr5 188390768 188390850 -14694682 + L2 LINE L2 3180 3267 -46 788 307 49 78 chr5 188391629 188392261 -14693271 - L2 LINE L2 -148 3165 2538 27 0 0 0 chr5 188392404 188392431 -14693101 + AT_rich Low_complexity Low_complexity 1 27 0 238 44 22 44 chr5 188393115 188393160 -14692372 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 261 0 0 0 chr5 188395102 188395131 -14690401 + (TG)n Simple_repeat Simple_repeat 2 30 0 1984 136 31 0 chr5 188396571 188396857 -14688675 - AluSx SINE Alu -17 295 1 234 240 0 0 chr5 188397966 188398016 -14687516 + L2 LINE L2 3264 3313 0 522 312 13 47 chr5 188398391 188398625 -14686907 - MIR SINE MIR -36 226 1 274 265 38 61 chr5 188398762 188398894 -14686638 - MER5A DNA MER1_type -43 146 18 382 327 30 48 chr5 188398918 188398994 -14686538 + MIR3 SINE MIR 34 110 -98 2332 114 27 29 chr5 188398994 188399370 -14686162 - THE1C LTR MaLR 0 375 1 382 327 30 48 chr5 188399370 188399458 -14686074 + MIR3 SINE MIR 110 195 -13 507 285 47 37 chr5 188400489 188400703 -14684829 + MIR SINE MIR 11 226 -36 5063 172 26 18 chr5 188400764 188401882 -14683650 - L1MB3 LINE L1 -8 6175 5045 1152 241 30 24 chr5 188401913 188402208 -14683324 + MER90 LTR ERV1 1 297 -317 2180 121 3 0 chr5 188402209 188402507 -14683025 - AluSx SINE Alu -13 299 1 503 177 57 50 chr5 188402508 188402649 -14682883 + MER90 LTR ERV1 473 614 0 490 246 62 8 chr5 188402657 188402787 -14682745 - MIR SINE MIR -93 169 33 1215 233 104 44 chr5 188402787 188403268 -14682264 + HAL1 LINE L1 1998 2507 0 1482 246 77 25 chr5 188404267 188404711 -14680821 - MLT1C LTR MaLR 0 467 1 431 319 7 29 chr5 188404797 188404935 -14680597 + L2 LINE L2 3138 3272 0 219 98 78 0 chr5 188405605 188405656 -14679876 + A-rich Low_complexity Low_complexity 2 56 0 396 329 29 18 chr5 188406566 188406736 -14678796 + MIR3 SINE MIR 34 205 -3 353 309 30 40 chr5 188407016 188407217 -14678315 + Charlie8 DNA MER1_type 39 237 -2180 228 67 0 0 chr5 188407304 188407334 -14678198 + (ATG)n Simple_repeat Simple_repeat 1 30 0 288 250 8 86 chr5 188407401 188407529 -14678003 - MIR SINE MIR -50 212 95 837 164 0 0 chr5 188407797 188407931 -14677601 - AluSg/x SINE Alu -8 304 171 188 310 17 0 chr5 188408231 188408289 -14677243 - L2 LINE L2 -10 3303 3245 313 220 0 59 chr5 188409299 188409386 -14676146 + MIR SINE MIR 84 163 -45 201 265 108 84 chr5 188410610 188410693 -14674839 + L2 LINE L2 3151 3235 -37 287 49 24 0 chr5 188410707 188410748 -14674784 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 448 304 108 16 chr5 188410864 188411180 -14674352 + L2 LINE L2 2746 3091 -222 327 209 30 0 chr5 188411180 188411247 -14674285 + L2 LINE L2 3243 3311 -2 249 33 0 0 chr5 188411444 188411474 -14674058 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 7063 57 3 40 chr5 188413926 188415200 -14670332 - SVA Other Other -723 1386 393 307 289 55 77 chr5 188415242 188415515 -14670017 + L1M2 LINE L1 596 862 -5987 388 350 35 14 chr5 188416049 188416192 -14669340 - MIR3 SINE MIR -12 196 51 273 321 98 29 chr5 188416507 188416781 -14668751 + L3 LINE CR1 1000 1292 -285 206 284 15 0 chr5 188416964 188417031 -14668501 - L2 LINE L2 -1 3312 3245 275 274 26 35 chr5 188417032 188417145 -14668387 + L2 LINE L2 3202 3313 0 425 378 25 15 chr5 188417154 188417355 -14668177 + L3 LINE CR1 1374 1576 -1 210 171 0 0 chr5 188418089 188418130 -14667402 + CT-rich Low_complexity Low_complexity 4 44 0 317 235 29 0 chr5 188418872 188418940 -14666592 + MLT1D LTR MaLR 1 70 -435 2260 177 60 49 chr5 188418940 188419427 -14666105 + MER21B LTR ERV1 1 492 -371 1187 285 127 20 chr5 188419595 188420209 -14665323 + L2 LINE L2 2443 3122 -191 259 319 11 0 chr5 188420217 188420311 -14665221 + (TA)n Simple_repeat Simple_repeat 1 95 0 383 289 35 42 chr5 188420331 188420473 -14665059 + L2 LINE L2 3164 3304 -9 681 273 34 27 chr5 188420492 188420785 -14664747 + L1MB7 LINE L1 5751 6045 -139 637 186 36 7 chr5 188421338 188421478 -14664054 + L1MA8 LINE L1 6137 6280 -11 266 270 77 136 chr5 188421571 188422079 -14663453 - L2 LINE L2 -3 3310 2833 382 328 92 0 chr5 188422539 188422777 -14662755 + L1ME LINE L1 5502 5761 -360 437 298 210 10 chr5 188422867 188423072 -14662460 - MIR SINE MIR -3 259 14 296 278 14 0 chr5 188423238 188423310 -14662222 - L2 LINE L2 -1 3271 3199 320 191 48 36 chr5 188423362 188423446 -14662086 + L1ME4a LINE L1 5967 6051 -70 560 320 112 32 chr5 188424126 188424438 -14661094 - L2 LINE L2 0 3313 2977 2663 42 0 3 chr5 188424787 188425099 -14660433 - AluY SINE Alu 0 311 1 424 285 92 56 chr5 188425126 188425374 -14660158 + MIR SINE MIR 3 253 -9 243 0 0 0 chr5 188427209 188427236 -14658296 + (CA)n Simple_repeat Simple_repeat 2 28 0 492 329 114 15 chr5 188427267 188427610 -14657922 - L1ME4a LINE L1 -267 5854 5478 344 303 101 0 chr5 188428967 188429086 -14656446 - L2 LINE L2 -619 2695 2565 323 297 92 57 chr5 188429278 188429507 -14656025 + MIR SINE MIR 14 250 -12 431 255 28 0 chr5 188429811 188429917 -14655615 - MER81 DNA DNA -1 113 5 228 284 137 32 chr5 188429939 188430034 -14655498 + MIR SINE MIR 37 141 -67 31 0 0 0 chr5 188431212 188431243 -14654289 + AT_rich Low_complexity Low_complexity 1 31 0 2260 96 3 0 chr5 188431984 188432312 -14653220 + AluSp SINE Alu 1 313 0 462 36 0 0 chr5 188432558 188432614 -14652918 + (TA)n Simple_repeat Simple_repeat 2 57 0 743 195 24 0 chr5 188432658 188432781 -14652751 + FLAM_C SINE Alu 2 127 -16 28 0 0 0 chr5 188432781 188432809 -14652723 + AT_rich Low_complexity Low_complexity 1 28 0 290 225 42 0 chr5 188433021 188433092 -14652440 + MIR3 SINE MIR 94 167 -41 180 194 0 0 chr5 188433377 188433413 -14652119 + MIR SINE MIR 169 204 -58 264 100 0 0 chr5 188433912 188433952 -14651580 + (TG)n Simple_repeat Simple_repeat 2 41 0 2258 106 0 10 chr5 188434183 188434484 -14651048 - AluSq SINE Alu -15 298 1 2081 115 7 10 chr5 188435425 188435720 -14649812 - AluSx SINE Alu -18 294 1 1258 213 48 90 chr5 188435746 188436248 -14649284 - L1MC4 LINE L1 -5 8037 7557 236 89 0 44 chr5 188436269 188436314 -14649218 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 247 24 24 24 chr5 188436805 188436846 -14648686 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2041 135 26 0 chr5 188436854 188437157 -14648375 + AluSx SINE Alu 1 311 -1 184 233 17 17 chr5 188437318 188437378 -14648154 - MER5C DNA MER1_type -200 124 65 227 288 164 0 chr5 188437632 188437705 -14647827 + L2 LINE L2 3229 3313 0 342 0 0 0 chr5 188439788 188439826 -14645706 + (CA)n Simple_repeat Simple_repeat 1 38 0 245 226 62 89 chr5 188440268 188440414 -14645118 - MIR SINE MIR -25 237 96 481 269 56 116 chr5 188440518 188440838 -14644694 + L2 LINE L2 2968 3268 -4 955 307 107 48 chr5 188441445 188441494 -14644038 - L3 LINE CR1 -1 1576 1531 216 0 0 0 chr5 188441494 188441518 -14644014 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 1623 191 22 7 chr5 188441518 188441796 -14643736 - AluJo SINE Alu -30 282 1 955 307 107 48 chr5 188441796 188442669 -14642863 - L3 LINE CR1 -45 1532 598 204 178 41 0 chr5 188442981 188443054 -14642478 + (TA)n Simple_repeat Simple_repeat 2 77 0 1493 181 71 15 chr5 188443491 188443854 -14641678 - MLT1D LTR MaLR 0 505 74 1450 182 31 37 chr5 188443924 188444248 -14641284 - MER21B LTR ERV1 0 863 542 2614 35 0 13 chr5 188446338 188446652 -14638880 + AluY SINE Alu 2 311 0 325 94 16 31 chr5 188447811 188447875 -14637657 + (TCC)n Simple_repeat Simple_repeat 3 65 0 307 335 150 31 chr5 188447947 188448174 -14637358 - MIR SINE MIR -6 256 3 684 236 39 17 chr5 188448204 188448379 -14637153 - MER5A DNA MER1_type 0 178 1 222 303 67 25 chr5 188448512 188448631 -14636901 - L2 LINE L2 0 3313 3190 192 304 82 99 chr5 188448756 188448999 -14636533 - L2 LINE L2 -198 3074 2836 250 172 16 31 chr5 188450373 188450437 -14635095 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 788 220 5 75 chr5 188450805 188451005 -14634527 + MER5A DNA MER1_type 4 189 0 460 299 8 0 chr5 188451052 188451186 -14634346 - MER5B DNA MER1_type -10 168 34 279 228 25 13 chr5 188451608 188451687 -14633845 + GA-rich Low_complexity Low_complexity 5 84 0 219 69 0 0 chr5 188452031 188452060 -14633472 + (TAA)n Simple_repeat Simple_repeat 3 31 0 457 249 225 6 chr5 188452077 188452246 -14633286 - MIR SINE MIR -26 236 31 198 0 0 0 chr5 188452734 188452756 -14632776 + (A)n Simple_repeat Simple_repeat 1 22 0 187 339 0 0 chr5 188452967 188453029 -14632503 - MIR SINE MIR -109 153 92 397 227 21 106 chr5 188454129 188454270 -14631262 - Charlie8 DNA MER1_type -2288 129 1 21 0 0 0 chr5 188455207 188455228 -14630304 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr5 188455981 188456006 -14629526 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 386 270 249 5 chr5 188456025 188456210 -14629322 + MIR SINE MIR 2 231 -31 186 339 53 47 chr5 188457258 188457429 -14628103 + L2 LINE L2 2821 2992 -280 * 441 326 0 0 chr5 188457425 188457566 -14627966 - MIR SINE MIR -35 227 87 * 464 294 111 57 chr5 188457553 188457921 -14627611 + L2 LINE L2 2922 3309 -4 435 288 171 15 chr5 188458930 188459135 -14626397 - MIR SINE MIR -1 261 25 299 283 142 9 chr5 188459836 188459949 -14625583 - L2 LINE L2 -24 3248 3121 911 231 16 0 chr5 188460077 188460263 -14625269 - MER5A DNA MER1_type 0 189 1 310 88 0 35 chr5 188460447 188460504 -14625028 + (TTC)n Simple_repeat Simple_repeat 2 56 0 180 0 0 0 chr5 188461133 188461153 -14624379 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2430 35 0 3 chr5 188461419 188461737 -14623795 + AluY SINE Alu 1 317 0 235 226 19 0 chr5 188461880 188461933 -14623599 - L2 LINE L2 -2 3311 3258 3010 143 38 33 chr5 188462038 188462585 -14622947 - L1MA8 LINE L1 -4 6287 5738 329 357 18 0 chr5 188462596 188462708 -14622824 + L2 LINE L2 3159 3272 0 598 305 19 14 chr5 188463955 188464165 -14621367 + MIR SINE MIR 44 254 -8 1909 165 102 73 chr5 188464342 188464753 -14620779 - MLT1D LTR MaLR 0 505 76 2079 191 34 36 chr5 188464753 188465219 -14620313 - MLT1C LTR MaLR -2 465 1 1909 165 102 73 chr5 188465219 188465298 -14620234 - MLT1D LTR MaLR -429 76 1 556 263 46 17 chr5 188466108 188466283 -14619249 + MIR SINE MIR 67 246 -16 219 292 0 0 chr5 188466238 188466303 -14619229 - MIR SINE MIR -10 252 188 * 189 202 162 71 chr5 188467350 188467449 -14618083 - MIR SINE MIR -124 138 31 269 319 126 4 chr5 188467677 188467865 -14617667 + MIR SINE MIR 7 230 -32 183 261 43 0 chr5 188467856 188467902 -14617630 - L2 LINE L2 -84 3188 3141 * 249 113 16 32 chr5 188468102 188468164 -14617368 + (TTA)n Simple_repeat Simple_repeat 2 62 0 210 264 38 0 chr5 188468207 188468260 -14617272 + MIR SINE MIR 198 252 -10 281 263 68 42 chr5 188470357 188470385 -14615147 - L2 LINE L2 0 3313 3287 1962 88 3 85 chr5 188470385 188470690 -14614842 + AluSq SINE Alu 1 280 -33 450 0 0 0 chr5 188470690 188470740 -14614792 + (CA)n Simple_repeat Simple_repeat 1 50 0 281 263 68 42 chr5 188470740 188470828 -14614704 - L2 LINE L2 -25 3288 3193 282 264 14 0 chr5 188471683 188471755 -14613777 + MER5A DNA MER1_type 4 76 -113 26 0 0 0 chr5 188471906 188471932 -14613600 + AT_rich Low_complexity Low_complexity 1 26 0 447 306 78 16 chr5 188471939 188472132 -14613400 - MIR SINE MIR 0 262 58 220 282 65 24 chr5 188472841 188472965 -14612567 + L2 LINE L2 2919 3047 -225 2078 119 27 3 chr5 188473226 188473520 -14612012 + AluSx SINE Alu 1 301 -11 338 318 20 47 chr5 188473813 188473961 -14611571 - MIR SINE MIR -59 203 60 2812 222 46 12 chr5 188475010 188475678 -14609854 + L1ME2 LINE L1 5428 6118 -46 4767 100 2 0 chr5 188475678 188476307 -14609225 + L1PA14 LINE L1 5532 6161 0 21 0 0 0 chr5 188476480 188476501 -14609031 + AT_rich Low_complexity Low_complexity 1 21 0 225 182 0 192 chr5 188476573 188476622 -14608910 + L1MD2 LINE L1 6007 6064 -295 2000 115 0 7 chr5 188476622 188476901 -14608631 + AluSx SINE Alu 1 277 -35 414 0 0 0 chr5 188476903 188476949 -14608583 + (CA)n Simple_repeat Simple_repeat 1 46 0 225 182 0 192 chr5 188476949 188476995 -14608537 + L1MD2 LINE L1 6065 6086 -273 * 1032 191 0 0 chr5 188476963 188477151 -14608381 + L1MD1 LINE L1 6053 6240 -2 23 0 0 0 chr5 188477186 188477209 -14608323 + AT_rich Low_complexity Low_complexity 1 23 0 192 179 0 0 chr5 188478269 188478308 -14607224 + CT-rich Low_complexity Low_complexity 2 40 0 2179 127 0 6 chr5 188478796 188479110 -14606422 + AluSx SINE Alu 1 312 0 889 170 0 7 chr5 188479153 188479441 -14606091 + GA-rich Low_complexity Low_complexity 1 286 0 260 411 48 16 chr5 188479666 188479790 -14605742 + L2 LINE L2 3137 3264 -8 1120 169 5 43 chr5 188480616 188480862 -14604670 - AluJo SINE Alu 0 321 84 21 0 0 0 chr5 188480920 188480941 -14604591 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr5 188481713 188481741 -14603791 + (A)n Simple_repeat Simple_repeat 1 28 0 202 152 43 0 chr5 188482884 188482930 -14602602 + (CATA)n Simple_repeat Simple_repeat 1 48 0 562 225 182 43 chr5 188483022 188483209 -14602323 - MER58C DNA MER1_type 0 215 3 438 229 45 67 chr5 188484104 188484283 -14601249 + MIR SINE MIR 88 262 0 1763 239 51 89 chr5 188486980 188487343 -14598189 - L1ME1 LINE L1 -4 6162 5835 1372 103 10 0 chr5 188487343 188487547 -14597985 - L1MA8 LINE L1 -4 6287 6082 1763 239 51 89 chr5 188487547 188487854 -14597678 - L1ME1 LINE L1 -331 5835 5518 190 244 0 0 chr5 188488950 188488995 -14596537 + L2 LINE L2 3268 3312 -1 2011 91 0 4 chr5 188489055 188489309 -14596223 + AluSc SINE Alu 43 295 -14 2039 147 66 12 chr5 188489484 188489804 -14595728 - MER1B DNA MER1_type 0 337 1 707 300 191 8 chr5 188490633 188491000 -14594532 - L2 LINE L2 -2 3311 2878 615 274 29 17 chr5 188491095 188491270 -14594262 + L2 LINE L2 2894 3070 -243 1816 159 0 30 chr5 188491912 188492208 -14593324 + AluJo SINE Alu 1 287 -25 2269 106 0 3 chr5 188492273 188492576 -14592956 + AluSx SINE Alu 1 302 -10 414 255 138 0 chr5 188492600 188492745 -14592787 - MIR SINE MIR 0 262 98 203 156 0 0 chr5 188493277 188493309 -14592223 + (TG)n Simple_repeat Simple_repeat 1 32 0 1417 157 42 19 chr5 188494942 188495204 -14590328 + L1MB7 LINE L1 5917 6184 0 192 77 0 0 chr5 188495461 188495487 -14590045 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 217 325 89 49 chr5 188495490 188495613 -14589919 - L2 LINE L2 -29 3243 3116 428 242 111 59 chr5 188495724 188495877 -14589655 + MIR SINE MIR 99 259 -3 677 272 7 14 chr5 188497027 188497240 -14588292 + MIR SINE MIR 33 244 -18 519 299 39 14 chr5 188497633 188497840 -14587692 - MIR SINE MIR 0 262 51 294 297 70 16 chr5 188499587 188499715 -14585817 - Charlie8 DNA MER1_type -2208 209 75 601 294 47 9 chr5 188499888 188500099 -14585433 - MIR SINE MIR -37 225 7 312 265 0 0 chr5 188502151 188502249 -14583283 + (CATATA)n Simple_repeat Simple_repeat 3 100 0 620 251 119 40 chr5 188502256 188502483 -14583049 + MER102a DNA MER1_type 72 316 -14 351 60 0 0 chr5 188504515 188504565 -14580967 + (CA)n Simple_repeat Simple_repeat 1 50 0 282 219 70 44 chr5 188504620 188504734 -14580798 + L1MC5 LINE L1 7553 7669 -292 261 128 0 0 chr5 188504780 188504819 -14580713 + L1PA15 LINE L1 6015 6053 -112 * 32818 105 9 56 chr5 188504814 188509531 -14576001 - L1PA7 LINE L1 -4 6150 1825 1936 59 0 4 chr5 188509531 188509767 -14575765 - AluY SINE Alu -3 308 74 32818 105 9 56 chr5 188509767 188511500 -14574032 - L1PA7 LINE L1 -4329 1825 12 445 260 65 26 chr5 188511960 188512114 -14573418 - MIR SINE MIR -24 238 79 2607 114 16 5 chr5 188512884 188513253 -14572279 - THE1C LTR MaLR 0 375 3 321 307 66 22 chr5 188513274 188513411 -14572121 - L2 LINE L2 -10 3303 3161 419 305 203 35 chr5 188514814 188515070 -14570462 - L2 LINE L2 0 3272 2974 561 333 106 50 chr5 188515139 188515620 -14569912 - L2 LINE L2 -480 2834 2327 957 236 0 0 chr5 188515771 188515936 -14569596 + FRAM SINE Alu 1 165 -1 513 322 75 13 chr5 188515990 188516229 -14569303 - MIR SINE MIR -7 255 2 31 0 0 0 chr5 188518910 188518941 -14566591 + AT_rich Low_complexity Low_complexity 1 31 0 214 333 70 31 chr5 188519395 188519483 -14566049 - MIR SINE MIR -12 250 154 2807 72 5 30 chr5 188519483 188519856 -14565676 + THE1B LTR MaLR 1 364 0 214 333 70 31 chr5 188519856 188519896 -14565636 - MIR SINE MIR -108 154 117 437 273 33 49 chr5 188520061 188520244 -14565288 - MLT1K LTR MaLR -262 326 147 425 183 0 8 chr5 188521492 188521612 -14563920 + GA-rich Low_complexity Low_complexity 2 120 0 2276 102 0 0 chr5 188521758 188522091 -14563441 + AluSx SINE Alu 1 333 0 231 331 40 27 chr5 188522143 188522291 -14563241 - MIR3 SINE MIR -15 193 44 1035 255 27 39 chr5 188522654 188522991 -14562541 - L1MC4a LINE L1 -1902 5906 5574 197 305 146 78 chr5 188523719 188524129 -14561403 - L2 LINE L2 -1 3271 2834 979 140 0 11 chr5 188524327 188524505 -14561027 + (GGAA)n Simple_repeat Simple_repeat 2 177 0 441 343 81 0 chr5 188524732 188524930 -14560602 - MIR SINE MIR 0 262 49 209 197 30 61 chr5 188525022 188525088 -14560444 + CT-rich Low_complexity Low_complexity 3 66 0 209 182 0 0 chr5 188526316 188526349 -14559183 + polypyrimidine Low_complexity Low_complexity 2 34 0 188 286 54 0 chr5 188526427 188526483 -14559049 + MIR3 SINE MIR 101 159 -49 3708 112 9 17 chr5 188527006 188527541 -14557991 + L1PA15 LINE L1 5634 6164 -1 2201 176 49 2 chr5 188528023 188528433 -14557099 + MSTB1 LTR MaLR 4 432 0 2932 158 17 49 chr5 188528437 188529013 -14556519 + L1MB5 LINE L1 5617 6174 0 465 272 88 106 chr5 188530227 188531074 -14554458 - L2 LINE L2 -1 3312 2462 962 278 33 40 chr5 188531099 188531498 -14554034 + LTR16A LTR ERVL 16 411 -39 424 237 43 43 chr5 188531516 188531655 -14553877 - L2 LINE L2 -872 2442 2304 2129 109 29 26 chr5 188531896 188532208 -14553324 + AluSq SINE Alu 1 313 0 420 338 176 11 chr5 188532247 188532605 -14552927 + L2 LINE L2 2845 3261 -11 426 347 41 21 chr5 188532666 188532908 -14552624 - MIR SINE MIR -11 251 5 239 283 111 50 chr5 188534065 188534164 -14551368 - L2 LINE L2 0 3272 3168 550 308 120 0 chr5 188534180 188534388 -14551144 - MIR SINE MIR -12 250 18 2013 147 3 0 chr5 188534573 188534866 -14550666 + AluSg SINE Alu 1 294 -16 457 229 56 34 chr5 188537176 188537355 -14548177 - L1MC4 LINE L1 0 8042 7860 187 318 0 0 chr5 188537479 188537523 -14548009 - MER5A DNA MER1_type -6 183 140 2036 115 31 7 chr5 188537530 188537818 -14547714 - AluSq SINE Alu -18 295 1 697 300 152 12 chr5 188538472 188538968 -14546564 - L2 LINE L2 -2 3311 2749 186 310 120 21 chr5 188539224 188539366 -14546166 - L2 LINE L2 0 3272 3117 339 78 0 0 chr5 188539456 188539507 -14546025 + (GA)n Simple_repeat Simple_repeat 2 52 0 294 248 8 77 chr5 188540659 188540776 -14544756 - MIR SINE MIR -77 185 77 469 219 50 6 chr5 188541251 188541381 -14544151 + MIR SINE MIR 112 248 -14 195 42 0 0 chr5 188541485 188541509 -14544023 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 2481 95 9 3 chr5 188542128 188542474 -14543058 + L1PB2 LINE L1 5804 6151 0 27 0 0 0 chr5 188542499 188542526 -14543006 + AT_rich Low_complexity Low_complexity 1 27 0 576 172 10 0 chr5 188542602 188542701 -14542831 - L1PA13 LINE L1 -298 5865 5766 614 92 31 0 chr5 188542701 188542794 -14542738 + L1PA15 LINE L1 6052 6152 -13 2008 123 0 27 chr5 188546917 188547236 -14538296 - AluSx SINE Alu 0 311 1 226 278 93 10 chr5 188547329 188547426 -14538106 - MIR SINE MIR -64 144 40 1152 252 52 18 chr5 188547687 188548016 -14537516 - MER58B DNA MER1_type -1 340 1 341 291 8 16 chr5 188550594 188550721 -14534811 + MIR SINE MIR 25 150 -112 438 241 68 8 chr5 188550777 188550910 -14534622 - HsTC2 DNA Tc2 -6 1892 1752 285 286 0 22 chr5 188550978 188551069 -14534463 - HsTC2 DNA Tc2 -1809 89 1 203 250 0 0 chr5 188551211 188551263 -14534269 + L2 LINE L2 3262 3313 0 360 0 0 0 chr5 188553504 188553544 -14531988 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 0 0 0 chr5 188554715 188554756 -14530776 + (CA)n Simple_repeat Simple_repeat 1 41 0 2279 95 3 7 chr5 188557320 188557625 -14527907 - AluSx SINE Alu -8 304 1 183 240 47 108 chr5 188558019 188558148 -14527384 + MIR SINE MIR 49 169 -93 924 210 47 4 chr5 188561524 188561708 -14523824 + MER20 DNA MER1_type 30 219 0 248 333 44 30 chr5 188562122 188562257 -14523275 - MIR SINE MIR -124 138 2 1869 167 0 16 chr5 188562557 188562869 -14522663 + AluJo SINE Alu 1 307 -5 512 254 61 108 chr5 188562988 188563383 -14522149 - MLT1L LTR MaLR -35 486 196 2172 113 0 0 chr5 188563518 188563832 -14521700 + AluSx SINE Alu 1 314 0 1490 225 115 28 chr5 188563925 188564351 -14521181 - MLT1C LTR MaLR 0 467 5 688 321 58 4 chr5 188564403 188564646 -14520886 - MIR SINE MIR -4 258 3 226 164 137 55 chr5 188565338 188565411 -14520121 + LTR68 LTR ERV1 199 277 -463 281 351 23 0 chr5 188565502 188565633 -14519899 - MIR SINE MIR -109 153 20 365 295 139 17 chr5 188566004 188566177 -14519355 - MIR SINE MIR -1 261 68 729 213 46 0 chr5 188566283 188566457 -14519075 - MIR SINE MIR -10 252 71 319 325 49 16 chr5 188566650 188566773 -14518759 - MIR SINE MIR -113 149 23 751 299 25 4 chr5 188566897 188567138 -14518394 + MIR SINE MIR 9 254 -8 267 329 65 77 chr5 188568969 188569309 -14516223 - L2 LINE L2 0 3272 2937 255 321 98 9 chr5 188572135 188572247 -14513285 - MIR SINE MIR -70 192 71 308 298 33 8 chr5 188572334 188572455 -14513077 - L2 LINE L2 0 3313 3190 299 283 9 0 chr5 188574155 188574268 -14511264 + (TA)n Simple_repeat Simple_repeat 1 114 0 831 262 9 9 chr5 188576774 188577003 -14508529 + MIR SINE MIR 20 248 -14 444 121 340 28 chr5 188578754 188578895 -14506637 - MER53 DNA DNA -1 188 4 231 176 99 121 chr5 188579013 188579104 -14506428 + MLT1K LTR MaLR 215 303 -285 1622 179 123 3 chr5 188579168 188579492 -14506040 - MLT1A1 LTR MaLR -2 363 1 261 0 0 0 chr5 188580354 188580383 -14505149 + (T)n Simple_repeat Simple_repeat 1 29 0 955 190 16 0 chr5 188580605 188580789 -14504743 - MER5A DNA MER1_type -2 187 1 340 248 71 26 chr5 188580791 188580904 -14504628 + L2 LINE L2 3150 3267 -5 424 299 7 7 chr5 188581642 188581796 -14503736 - MIR SINE MIR -1 261 108 935 138 0 6 chr5 188581796 188581863 -14503669 + (GGGA)n Simple_repeat Simple_repeat 1 232 0 935 138 0 6 chr5 188581863 188582030 -14503502 + (GGGA)n Simple_repeat Simple_repeat 3 168 0 417 235 52 3 chr5 188583330 188583457 -14502075 + MIR SINE MIR 38 170 -62 181 290 29 14 chr5 188583606 188583675 -14501857 - L2 LINE L2 0 3313 3244 2117 110 0 17 chr5 188583746 188584036 -14501496 + AluSx SINE Alu 1 285 -27 465 133 0 0 chr5 188584036 188584111 -14501421 + (TA)n Simple_repeat Simple_repeat 2 76 0 248 130 0 0 chr5 188584113 188584159 -14501373 - LTR66 LTR ERVL -171 439 394 1082 117 35 23 chr5 188584163 188584334 -14501198 + AluSg/x SINE Alu 127 299 -13 1306 186 3 118 chr5 188584426 188584775 -14500757 + AluSx SINE Alu 1 309 -3 353 248 200 0 chr5 188584861 188584986 -14500546 + Charlie5 DNA MER1_type 51 200 -2412 * 999 138 96 46 chr5 188584984 188585202 -14500330 + Charlie5 DNA MER1_type 2352 2587 -37 2020 124 38 0 chr5 188585202 188585493 -14500039 + AluSx SINE Alu 1 302 -10 999 138 96 46 chr5 188585493 188585534 -14499998 + Charlie5 DNA MER1_type 2586 2624 0 330 303 9 0 chr5 188585796 188585905 -14499627 + MIR SINE MIR 87 196 -66 2379 67 11 0 chr5 188586335 188586620 -14498912 + AluSq SINE Alu 5 292 -21 908 132 7 0 chr5 188586620 188586772 -14498760 + (TA)n Simple_repeat Simple_repeat 2 154 0 470 264 30 51 chr5 188587710 188587907 -14497625 + MIR3 SINE MIR 2 194 -14 464 268 232 0 chr5 188588051 188588249 -14497283 + MIR SINE MIR 18 261 -1 518 239 39 19 chr5 188588445 188588600 -14496932 + MIR SINE MIR 104 261 -1 215 274 0 0 chr5 188588599 188588650 -14496882 - MIR SINE MIR -69 139 89 * 557 300 0 6 chr5 188591125 188591285 -14494247 + MIR SINE MIR 3 161 -101 460 315 115 29 chr5 188591456 188591770 -14493762 + L2 LINE L2 2966 3306 -7 758 191 0 0 chr5 188593247 188593373 -14492159 - FLAM_C SINE Alu -17 126 1 589 263 12 6 chr5 188593603 188593763 -14491769 - MLT1I LTR MaLR -1 408 248 346 220 156 0 chr5 188594008 188594117 -14491415 + MIR SINE MIR 122 247 -15 1941 61 16 16 chr5 188594122 188594367 -14491165 + AluY SINE Alu 5 249 -62 22 0 0 0 chr5 188595245 188595267 -14490265 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 188595699 188595726 -14489806 + AT_rich Low_complexity Low_complexity 1 27 0 306 138 0 0 chr5 188597836 188597894 -14487638 + (CAG)n Simple_repeat Simple_repeat 3 60 0 937 211 38 19 chr5 188599052 188599265 -14486267 + MER20 DNA MER1_type 1 217 -2 2027 121 4 4 chr5 188599776 188600086 -14485446 - AluSx SINE Alu 0 311 2 1099 206 22 22 chr5 188601245 188601468 -14484064 + MER58A DNA MER1_type 1 223 -1 417 385 64 0 chr5 188601644 188601862 -14483670 + MIR SINE MIR 28 259 -3 809 163 0 22 chr5 188601964 188602099 -14483433 + AluJo SINE Alu 3 134 -178 2147 73 36 14 chr5 188602100 188602375 -14483157 + AluY SINE Alu 1 281 -30 235 174 0 0 chr5 188602402 188602448 -14483084 - LTR66 LTR ERVL -171 439 394 1323 191 151 3 chr5 188603477 188603775 -14481757 - MER2 DNA MER2_type -2 342 1 425 304 6 25 chr5 188603787 188603948 -14481584 + MIR SINE MIR 2 159 -103 407 186 49 29 chr5 188605779 188605881 -14479651 - MIR SINE MIR -125 137 34 290 221 15 0 chr5 188606375 188606443 -14479089 + L1MC4 LINE L1 7676 7744 -298 3343 155 48 10 chr5 188606443 188607023 -14478509 + MER7C DNA MER2_type 1 602 0 243 79 0 0 chr5 188607295 188607333 -14478199 + (CA)n Simple_repeat Simple_repeat 2 39 0 186 43 0 0 chr5 188607641 188607664 -14477868 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 31 0 0 0 chr5 188607765 188607796 -14477736 + AT_rich Low_complexity Low_complexity 1 31 0 2260 124 30 50 chr5 188607808 188608172 -14477360 - LTR18A LTR ERVL 0 357 1 180 309 89 16 chr5 188608270 188608393 -14477139 - L2 LINE L2 -1 3271 3140 493 294 50 27 chr5 188608787 188609008 -14476524 - MIR SINE MIR -2 260 35 535 293 137 9 chr5 188609816 188610028 -14475504 - MIR SINE MIR -21 241 3 1666 150 0 78 chr5 188610091 188610424 -14475108 + AluJb SINE Alu 2 308 -4 193 288 15 15 chr5 188610754 188610820 -14474712 - MIR3 SINE MIR -32 176 111 250 207 0 0 chr5 188611199 188611257 -14474275 - MIR SINE MIR -110 152 95 3124 179 68 12 chr5 188612318 188612961 -14472571 + L1MB7 LINE L1 5442 6120 -64 633 275 39 0 chr5 188613615 188613797 -14471735 - MER117 DNA MER1_type -6 191 3 324 0 0 0 chr5 188613941 188613977 -14471555 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 282 291 0 0 chr5 188615348 188615427 -14470105 + MIR SINE MIR 56 134 -128 24 53 0 0 chr5 188615596 188615634 -14469898 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 188615756 188615785 -14469747 + AT_rich Low_complexity Low_complexity 1 29 0 595 290 98 66 chr5 188615825 188615878 -14469654 - MLT1I LTR MaLR -57 352 302 935 194 26 66 chr5 188615878 188616105 -14469427 + MER20 DNA MER1_type 2 219 0 595 290 98 66 chr5 188616105 188616386 -14469146 - MLT1I LTR MaLR -107 302 7 256 250 34 74 chr5 188616461 188616609 -14468923 - L1ME LINE L1 -519 5602 5461 204 258 0 16 chr5 188618506 188618568 -14466964 + (TA)n Simple_repeat Simple_repeat 2 62 0 282 29 0 0 chr5 188618828 188618863 -14466669 + (TG)n Simple_repeat Simple_repeat 2 36 0 426 253 73 20 chr5 188619516 188619666 -14465866 - MIR SINE MIR 0 262 105 289 256 0 13 chr5 188620089 188620167 -14465365 + HsTC2 DNA Tc2 3 79 -1819 21 57 0 0 chr5 188620443 188620478 -14465054 + AT_rich Low_complexity Low_complexity 1 35 0 1383 206 20 30 chr5 188620492 188620906 -14464626 + AluJb SINE Alu 1 411 0 287 64 0 43 chr5 188620936 188620983 -14464549 + (GGAAA)n Simple_repeat Simple_repeat 4 48 0 607 271 34 20 chr5 188621036 188621262 -14464270 + MIR SINE MIR 7 236 -26 313 225 135 40 chr5 188621414 188621636 -14463896 - L1ME4a LINE L1 -121 6000 5758 308 304 17 0 chr5 188621637 188621752 -14463780 - L1ME4a LINE L1 -392 5729 5613 231 266 40 3 chr5 188621803 188621931 -14463601 - MIR SINE MIR -11 251 84 259 302 178 6 chr5 188622585 188622754 -14462778 + MIR SINE MIR 2 199 -63 217 253 154 0 chr5 188623863 188623954 -14461578 - L2 LINE L2 -8 3264 3160 256 316 71 0 chr5 188624489 188624587 -14460945 + L2 LINE L2 3191 3295 -18 380 247 161 8 chr5 188624640 188624883 -14460649 + L2 LINE L2 2845 3124 -189 3514 64 4 2 chr5 188624938 188625392 -14460140 - L1PB1 LINE L1 -4 6147 5693 1287 210 48 46 chr5 188625395 188625686 -14459846 - L1ME2 LINE L1 -35 6129 5835 2846 71 3 11 chr5 188625686 188626053 -14459479 - THE1B LTR MaLR 0 364 1 1287 210 48 46 chr5 188626053 188626156 -14459376 - L1ME2 LINE L1 -329 5835 5734 2165 110 0 0 chr5 188626168 188626498 -14459034 - AluSg SINE Alu 0 330 1 608 218 30 8 chr5 188626541 188626674 -14458858 + L2 LINE L2 3178 3313 0 597 199 261 0 chr5 188626953 188627129 -14458403 + MIR SINE MIR 31 252 -10 421 224 10 20 chr5 188627299 188627397 -14458135 - L2 LINE L2 -1 3312 3216 41814 65 5 6 chr5 188627403 188633556 -14451976 - L1PA6 LINE L1 -1 6153 7 4592 123 21 30 chr5 188633721 188634468 -14451064 - L1PA16 LINE L1 -9 6157 5417 568 278 26 5 chr5 188634478 188634672 -14450860 - L2 LINE L2 -243 3070 2873 274 333 122 11 chr5 188635016 188635205 -14450327 + MIR SINE MIR 53 262 0 2286 114 0 3 chr5 188637302 188637609 -14447923 + AluSg SINE Alu 1 306 -4 369 237 68 8 chr5 188637692 188637810 -14447722 - L2 LINE L2 -85 3228 3104 397 286 133 15 chr5 188638568 188638764 -14446768 - MIR SINE MIR -26 236 18 370 323 73 17 chr5 188639098 188639398 -14446134 + L2 LINE L2 2439 2755 -559 481 316 0 53 chr5 188639591 188639781 -14445751 + MIR SINE MIR 19 198 -64 438 219 148 0 chr5 188639797 188639925 -14445607 - MIR SINE MIR -8 254 108 435 273 30 23 chr5 188640041 188640173 -14445359 - MER46C DNA MER2_type -2 336 204 420 92 0 15 chr5 188640193 188640258 -14445274 + (CA)n Simple_repeat Simple_repeat 1 64 0 225 179 71 18 chr5 188640264 188640320 -14445212 - MER46C DNA MER2_type -274 64 6 509 239 159 6 chr5 188640963 188641139 -14444393 + MIR SINE MIR 16 218 -44 199 302 0 0 chr5 188641575 188641638 -14443894 - MIR SINE MIR -91 171 109 274 136 20 0 chr5 188641849 188641906 -14443626 + MIR SINE MIR 92 141 -67 1203 190 14 5 chr5 188642280 188642501 -14443031 + MER58A DNA MER1_type 1 223 -1 496 320 66 22 chr5 188642854 188643082 -14442450 - MIR SINE MIR -12 250 13 354 173 0 0 chr5 188643952 188644027 -14441505 + (CA)n Simple_repeat Simple_repeat 1 75 0 180 302 0 0 chr5 188644027 188644070 -14441462 - L2 LINE L2 -9 3304 3262 1186 127 6 0 chr5 188644578 188644743 -14440789 - MER1A DNA MER1_type -168 361 196 * 3617 120 6 0 chr5 188644735 188645225 -14440307 + MER1A DNA MER1_type 37 529 0 606 289 124 52 chr5 188645225 188645701 -14439831 + L2 LINE L2 2793 3295 -18 2244 211 23 33 chr5 188645716 188646236 -14439296 - LTR40a LTR ERVL -4 515 1 233 239 155 102 chr5 188647305 188647375 -14438157 + MER102b DNA MER1_type 64 129 -1299 1939 137 18 7 chr5 188647375 188647569 -14437963 - AluSx SINE Alu 0 312 124 276 30 0 0 chr5 188647569 188647602 -14437930 + (TG)n Simple_repeat Simple_repeat 2 34 0 1939 137 18 7 chr5 188647602 188647721 -14437811 - AluSx SINE Alu -188 124 8 233 239 155 102 chr5 188647721 188647914 -14437618 + MER102b DNA MER1_type 129 341 0 207 152 0 0 chr5 188648754 188648800 -14436732 + (CA)n Simple_repeat Simple_repeat 1 46 0 275 263 204 0 chr5 188648815 188648882 -14436650 + MER112 DNA MER1_type 73 125 -135 2183 132 7 0 chr5 188648882 188649186 -14436346 - AluSx SINE Alu -6 306 1 275 263 204 0 chr5 188649186 188649270 -14436262 + MER112 DNA MER1_type 125 255 -5 562 263 115 10 chr5 188649274 188649483 -14436049 + MIR SINE MIR 14 244 -18 2227 38 0 0 chr5 188649886 188650150 -14435382 - L1P LINE L1 -1677 4469 4206 5762 48 3 54 chr5 188650150 188650911 -14434621 + L1PA7 LINE L1 5429 6154 0 248 286 19 19 chr5 188651901 188652006 -14433526 + MER113 DNA MER1_type? 6 110 -411 2325 100 3 0 chr5 188652042 188652342 -14433190 - AluSp SINE Alu -11 302 2 208 340 39 0 chr5 188652751 188652854 -14432678 - MIR SINE MIR -3 259 153 2561 33 7 3 chr5 188652854 188653159 -14432373 - L1PA4 LINE L1 -2 6153 5848 1545 235 97 18 chr5 188653180 188653622 -14431910 - L1MD3 LINE L1 -8 7987 7511 211 191 0 0 chr5 188653657 188653699 -14431833 + (TG)n Simple_repeat Simple_repeat 1 42 0 2041 133 3 10 chr5 188653960 188654295 -14431237 - AluSx SINE Alu 0 312 1 206 370 17 8 chr5 188654834 188654953 -14430579 - L2 LINE L2 0 3272 3153 2177 177 48 16 chr5 188655080 188655521 -14430011 + MER88 LTR ERVL 2 456 -8 225 0 0 0 chr5 188656310 188656335 -14429197 + (CAT)n Simple_repeat Simple_repeat 2 26 0 736 208 43 14 chr5 188656342 188656549 -14428983 - MIR SINE MIR -12 250 38 1509 188 4 0 chr5 188656745 188657006 -14428526 + AluSq SINE Alu 1 262 -51 231 88 0 0 chr5 188657011 188657045 -14428487 + (GA)n Simple_repeat Simple_repeat 1 34 0 235 314 13 58 chr5 188657410 188657566 -14427966 - MER5A DNA MER1_type -34 155 7 229 262 16 0 chr5 188658147 188658208 -14427324 + GA-rich Low_complexity Low_complexity 1 62 0 589 273 56 35 chr5 188658260 188658491 -14427041 + MIR SINE MIR 6 241 -21 346 293 0 9 chr5 188658502 188658608 -14426924 - MIR SINE MIR -78 184 80 336 314 82 6 chr5 188659285 188659444 -14426088 - MIR SINE MIR 0 262 92 414 191 117 0 chr5 188659481 188659575 -14425957 - MER5A DNA MER1_type -1 188 84 369 242 225 0 chr5 188659573 188659693 -14425839 + MER5A DNA MER1_type 35 181 -8 * 198 103 0 0 chr5 188660002 188660031 -14425501 + (T)n Simple_repeat Simple_repeat 1 29 0 433 280 45 66 chr5 188660290 188660533 -14424999 - MIR SINE MIR -16 246 9 206 290 54 21 chr5 188660505 188660598 -14424934 - L2 LINE L2 -30 3283 3188 * 328 290 105 49 chr5 188661690 188662190 -14423342 - L1MC/D LINE L1 -744 5402 5000 2551 81 40 0 chr5 188662190 188662538 -14422994 - L1PA13 LINE L1 -3 6160 5799 328 290 105 49 chr5 188662538 188662621 -14422911 - L1MC/D LINE L1 -1146 5000 4923 1651 175 0 11 chr5 188662999 188663312 -14422220 + AluJb SINE Alu 1 310 0 353 269 139 15 chr5 188664104 188664305 -14421227 - MIR SINE MIR -24 238 13 2373 92 3 0 chr5 188664976 188665271 -14420261 + AluSx SINE Alu 1 296 -16 800 260 206 9 chr5 188665291 188665514 -14420018 + MLT2F LTR ERVL 69 335 -328 552 24 0 47 chr5 188665826 188665911 -14419621 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 24 67 0 0 chr5 188665911 188665956 -14419576 + AT_rich Low_complexity Low_complexity 1 45 0 431 270 63 32 chr5 188666252 188666441 -14419091 + MER117 DNA MER1_type 1 195 -2 1812 157 60 0 chr5 188667834 188668153 -14417379 - MER44D DNA MER2_type 0 609 2 441 266 90 49 chr5 188668341 188668585 -14416947 + MIR SINE MIR 2 255 -7 397 277 6 38 chr5 188669203 188669362 -14416170 + CT-rich Low_complexity Low_complexity 3 156 0 2413 67 0 0 chr5 188672646 188672956 -14412576 - AluY SINE Alu 0 310 1 1794 191 0 7 chr5 188673495 188673804 -14411728 + AluJo SINE Alu 1 307 -5 280 289 99 20 chr5 188673975 188674127 -14411405 + L1MEd LINE L1 446 609 -5510 251 289 19 48 chr5 188676348 188676452 -14409080 + MIR SINE MIR 36 136 -72 990 211 11 0 chr5 188676866 188677051 -14408481 - MER5A DNA MER1_type -1 188 2 1215 214 54 0 chr5 188679146 188679422 -14406110 + MER58B DNA MER1_type 1 291 -50 1952 138 32 3 chr5 188681096 188681378 -14404154 + AluSx SINE Alu 1 290 -22 186 322 51 25 chr5 188683155 188683273 -14402259 + L3 LINE CR1 1331 1451 -126 340 321 69 0 chr5 188683477 188683608 -14401924 + MIR3 SINE MIR 42 181 -27 300 217 163 0 chr5 188683790 188683882 -14401650 - MER113 DNA MER1_type? -413 108 2 21 0 0 0 chr5 188684239 188684260 -14401272 + AT_rich Low_complexity Low_complexity 1 21 0 2132 125 0 0 chr5 188684353 188684659 -14400873 + AluSx SINE Alu 1 306 0 437 230 178 15 chr5 188684709 188684844 -14400688 + MIR SINE MIR 105 261 -1 2473 77 0 3 chr5 188684885 188685182 -14400350 + AluSq SINE Alu 2 297 -16 436 333 53 13 chr5 188688618 188688846 -14396686 + MIR SINE MIR 5 241 -21 240 267 17 0 chr5 188689281 188689341 -14396191 - L2 LINE L2 0 3272 3212 924 258 55 70 chr5 188690145 188690490 -14395042 - MER102b DNA MER1_type -1 340 1 214 261 0 0 chr5 188690995 188691041 -14394491 + (TG)n Simple_repeat Simple_repeat 1 46 0 202 231 115 0 chr5 188693313 188693365 -14392167 + L2 LINE L2 3204 3261 -11 2205 94 0 28 chr5 188694321 188694639 -14390893 - AluSp SINE Alu -4 309 1 11033 22 1 0 chr5 188694660 188696692 -14388840 - L1PA2 LINE L1 0 6155 4122 396 229 139 28 chr5 188696697 188696841 -14388691 + MER106B DNA MER1_type 899 1058 -1 478 324 51 43 chr5 188697084 188697337 -14388195 - MIR SINE MIR 0 262 8 521 41 0 14 chr5 188699344 188699417 -14386115 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 1589 236 108 22 chr5 188700062 188700739 -14384793 + L2 LINE L2 2578 3312 -1 487 288 62 44 chr5 188701253 188701484 -14384048 + MIR SINE MIR 1 241 -21 549 281 136 25 chr5 188701948 188702183 -14383349 - MIR SINE MIR 0 262 2 272 296 14 0 chr5 188702408 188702479 -14383053 + MER81 DNA DNA 43 114 0 935 273 19 0 chr5 188702479 188702695 -14382837 + MIR SINE MIR 17 236 -26 192 323 188 0 chr5 188703533 188703629 -14381903 - L2 LINE L2 0 3313 3200 669 213 46 52 chr5 188703663 188703837 -14381695 - MER5B DNA MER1_type -5 173 1 269 245 25 113 chr5 188704082 188704165 -14381367 - L2 LINE L2 -469 2845 2781 820 159 118 6 chr5 188704165 188704335 -14381197 - MER5A DNA MER1_type 0 189 1 269 245 25 113 chr5 188704335 188704410 -14381122 - L2 LINE L2 -533 2781 2701 22 0 0 0 chr5 188704631 188704653 -14380879 + AT_rich Low_complexity Low_complexity 1 22 0 1926 113 3 39 chr5 188704702 188705011 -14380521 - AluSq SINE Alu -15 298 1 193 29 59 0 chr5 188705831 188705865 -14379667 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 237 253 27 13 chr5 188706294 188706369 -14379163 - MIR SINE MIR -8 254 179 288 0 0 0 chr5 188706379 188706411 -14379121 + (A)n Simple_repeat Simple_repeat 1 32 0 564 309 12 12 chr5 188706442 188706610 -14378922 - L2 LINE L2 -2 3311 3144 328 262 47 0 chr5 188706602 188706709 -14378823 - MIR SINE MIR -119 143 32 * 21 0 0 0 chr5 188706732 188706753 -14378779 + AT_rich Low_complexity Low_complexity 1 21 0 452 223 11 11 chr5 188707424 188707518 -14378014 + MER91B DNA MER1_type 49 142 -48 582 274 113 84 chr5 188707629 188708376 -14377156 - L2 LINE L2 -209 3063 2218 1631 148 0 0 chr5 188708385 188708675 -14376857 - AluSx SINE Alu 0 324 35 261 293 81 20 chr5 188708894 188708993 -14376539 - L2 LINE L2 -18 3295 3191 1079 125 25 0 chr5 188708998 188709158 -14376374 - MER20 DNA MER1_type -3 216 53 659 191 0 59 chr5 188709158 188709294 -14376238 + FLAM_A SINE Alu 2 129 -4 539 107 0 0 chr5 188709305 188709380 -14376152 + (C)n Simple_repeat Simple_repeat 1 75 0 24 67 0 0 chr5 188709988 188710033 -14375499 + AT_rich Low_complexity Low_complexity 1 45 0 230 278 0 0 chr5 188710247 188710337 -14375195 - L1MC4 LINE L1 -1339 6703 6614 * 236 274 0 0 chr5 188710260 188710344 -14375188 + L1MC4 LINE L1 6615 6698 -1344 1158 145 0 0 chr5 188710346 188710525 -14375007 + AluSg/x SINE Alu 129 307 -5 297 153 14 153 chr5 188710526 188710598 -14374934 - MER20 DNA MER1_type -157 62 1 182 307 93 27 chr5 188711494 188711569 -14373963 + L3b LINE CR1 1383 1462 -121 1562 176 0 37 chr5 188712094 188712390 -14373142 + AluJo SINE Alu 1 285 -27 524 194 0 0 chr5 188712780 188712873 -14372659 + L1MB7 LINE L1 6081 6173 -11 243 0 0 0 chr5 188713174 188713201 -14372331 + (CA)n Simple_repeat Simple_repeat 2 28 0 375 285 49 24 chr5 188714523 188714646 -14370886 - MIR SINE MIR -120 142 17 574 186 145 47 chr5 188714646 188714818 -14370714 + MER58B DNA MER1_type 1 189 -152 385 83 0 0 chr5 188714851 188714899 -14370633 + Alu SINE Alu 1 48 -254 279 180 0 0 chr5 188714899 188714949 -14370583 - L1MA10 LINE L1 -105 6229 6180 3429 143 77 37 chr5 188714955 188715582 -14369950 - PABL_A LTR ERV1 -8 652 1 705 209 32 6 chr5 188715632 188715790 -14369742 - L1MB1 LINE L1 -25 6164 6003 715 206 39 13 chr5 188715790 188715945 -14369587 + MER58B DNA MER1_type 183 341 0 274 280 80 10 chr5 188716177 188716277 -14369255 - L2 LINE L2 -2 3311 3205 265 235 269 7 chr5 188716345 188716494 -14369038 + Charlie7 DNA MER1_type 2421 2608 -4 319 121 0 69 chr5 188717803 188717861 -14367671 + MER105 DNA DNA 1 54 -150 633 221 77 50 chr5 188717865 188718046 -14367486 - MER5A DNA MER1_type -1 188 3 772 185 12 19 chr5 188718046 188718208 -14367324 + MER105 DNA DNA 44 204 0 433 260 78 26 chr5 188719134 188719288 -14366244 + MIR SINE MIR 95 256 -6 426 326 22 43 chr5 188719407 188719591 -14365941 - MER5A DNA MER1_type -2 187 8 1988 126 10 17 chr5 188719756 188720058 -14365474 + AluJb SINE Alu 3 302 -10 216 158 0 0 chr5 188720197 188720235 -14365297 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 232 297 85 51 chr5 188720241 188720359 -14365173 - L2 LINE L2 0 3272 3151 2106 117 0 10 chr5 188721578 188721886 -14363646 + AluSx SINE Alu 1 305 -7 365 58 19 0 chr5 188721892 188721944 -14363588 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 281 123 31 77 chr5 188721960 188722025 -14363507 - MIR SINE MIR 0 262 201 * 498 283 80 29 chr5 188722018 188722122 -14363410 + L2 LINE L2 2600 2697 -617 368 94 234 0 chr5 188722122 188722186 -14363346 - MADE1 DNA Mariner -1 79 1 498 283 80 29 chr5 188722186 188722357 -14363175 + L2 LINE L2 2697 2889 -425 184 189 162 0 chr5 188722463 188722500 -14363032 + L2 LINE L2 3005 3047 -266 210 208 21 0 chr5 188722649 188722697 -14362835 - MIR SINE MIR -111 151 103 877 205 33 23 chr5 188723388 188723603 -14361929 + MER20 DNA MER1_type 1 217 -2 382 258 53 79 chr5 188723717 188723907 -14361625 - MIR SINE MIR -17 245 61 323 271 42 25 chr5 188724504 188724622 -14360910 - MIR3 SINE MIR -87 121 2 363 327 144 40 chr5 188724894 188725298 -14360234 - L2 LINE L2 0 3272 2827 408 341 140 0 chr5 188725553 188725732 -14359800 + MIR SINE MIR 29 232 -30 857 166 55 12 chr5 188725732 188725895 -14359637 - MER5A DNA MER1_type -7 182 13 612 280 17 23 chr5 188726298 188726473 -14359059 + MIR SINE MIR 25 198 -64 275 333 94 0 chr5 188726701 188726818 -14358714 + Charlie8 DNA MER1_type 1 128 -2289 363 263 110 25 chr5 188726821 188726939 -14358593 - MIR3 SINE MIR -75 133 6 1099 299 48 11 chr5 188727425 188727983 -14357549 + L2 LINE L2 2660 3237 -76 235 267 75 58 chr5 188728322 188728442 -14357090 + L2 LINE L2 2246 2367 -947 215 322 41 34 chr5 188728922 188729068 -14356464 + L2 LINE L2 2258 2404 -910 246 146 62 21 chr5 188729215 188729263 -14356269 + MIR SINE MIR 118 167 -95 351 218 18 71 chr5 188729316 188729486 -14356046 - L1MC4 LINE L1 -1 8041 7881 264 242 31 31 chr5 188729488 188729616 -14355916 + (TA)n Simple_repeat Simple_repeat 1 128 0 1103 220 3 37 chr5 188729645 188729941 -14355591 + AluJo SINE Alu 2 287 -15 520 301 157 0 chr5 188730230 188730383 -14355149 + MER5A DNA MER1_type 13 189 0 2319 103 0 0 chr5 188730847 188731157 -14354375 - AluSx SINE Alu -2 310 1 609 266 62 66 chr5 188731521 188731762 -14353770 - MIR SINE MIR 0 262 23 2194 102 0 3 chr5 188732006 188732310 -14353222 - AluSg SINE Alu -7 303 1 213 288 18 72 chr5 188733055 188733166 -14352366 - MIR SINE MIR -21 241 137 555 228 54 33 chr5 188733170 188733354 -14352178 - L1ME3 LINE L1 -79 6083 5896 618 285 131 9 chr5 188734542 188734626 -14350906 - MIR SINE MIR -13 249 177 246 81 0 0 chr5 188734626 188734663 -14350869 + (CAT)n Simple_repeat Simple_repeat 1 37 0 618 285 131 9 chr5 188734663 188734799 -14350733 - MIR SINE MIR -85 177 2 651 81 0 0 chr5 188735096 188735195 -14350337 + (TA)n Simple_repeat Simple_repeat 2 100 0 521 276 21 36 chr5 188735195 188735387 -14350145 - MIR SINE MIR -68 194 6 210 171 0 0 chr5 188735852 188735887 -14349645 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 309 366 61 8 chr5 188737712 188737843 -14347689 - L2 LINE L2 -1 3271 3134 240 239 221 61 chr5 188737883 188738046 -14347486 + MER5A DNA MER1_type 1 189 0 2077 167 14 14 chr5 188738078 188738443 -14347089 - MLT1A1 LTR MaLR 0 365 1 208 286 0 65 chr5 188738444 188738521 -14347011 - L2 LINE L2 -202 3070 2999 934 131 0 0 chr5 188738961 188739091 -14346441 - FLAM_C SINE Alu -13 130 1 364 200 64 43 chr5 188739213 188739353 -14346179 - L1ME4a LINE L1 -18 6103 5961 315 98 0 0 chr5 188739607 188739648 -14345884 - Alu SINE Alu -261 41 1 * 435 194 14 0 chr5 188739648 188739719 -14345813 - MER58A DNA MER1_type -35 72 1 665 221 21 0 chr5 188739769 188739909 -14345623 - MIR SINE MIR -112 150 8 869 302 157 18 chr5 188741332 188741772 -14343760 - L2 LINE L2 -5 3308 2808 334 222 74 90 chr5 188742168 188742357 -14343175 - MIR SINE MIR -62 200 15 233 273 23 0 chr5 188742424 188742512 -14343020 - L1MC4 LINE L1 -1339 6703 6614 3358 219 69 70 chr5 188742542 188742996 -14342536 - L1MC5 LINE L1 -59 7902 7449 234 91 0 0 chr5 188742996 188743029 -14342503 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 3358 219 69 70 chr5 188743029 188743865 -14341667 - L1MC5 LINE L1 -512 7449 6614 181 227 204 0 chr5 188745927 188745971 -14339561 + MER5A DNA MER1_type 136 188 -1 996 302 83 54 chr5 188746298 188747156 -14338376 - L2 LINE L2 -5 3308 2423 182 317 37 0 chr5 188747375 188747457 -14338075 - L2 LINE L2 -2 3311 3227 246 339 80 77 chr5 188748456 188748807 -14336725 + L2 LINE L2 2920 3271 -1 29 47 0 0 chr5 188749804 188749847 -14335685 + AT_rich Low_complexity Low_complexity 1 43 0 2413 194 67 8 chr5 188750287 188750886 -14334646 - MER69 DNA AcHobo 0 2526 1893 795 311 11 32 chr5 188750911 188751191 -14334341 - MER69 DNA AcHobo -803 423 150 517 333 16 5 chr5 188752780 188752969 -14332563 - MER117 DNA MER1_type -5 192 2 1470 166 49 32 chr5 188755084 188755368 -14330164 + AluJo SINE Alu 13 301 -11 270 309 83 77 chr5 188755561 188755742 -14329790 - MIR3 SINE MIR -24 184 3 1957 46 0 4 chr5 188756976 188757215 -14328317 + AluY SINE Alu 61 298 -13 214 250 0 0 chr5 188757452 188757496 -14328036 + MIR SINE MIR 217 260 -2 195 100 0 0 chr5 188758639 188758669 -14326863 + (GA)n Simple_repeat Simple_repeat 1 30 0 436 293 186 12 chr5 188759195 188759362 -14326170 - MER91A DNA MER1_type 0 196 1 225 0 0 0 chr5 188761353 188761378 -14324154 + (A)n Simple_repeat Simple_repeat 1 25 0 1792 189 0 0 chr5 188762358 188762670 -14322862 + AluSx SINE Alu 1 312 0 548 254 49 1 chr5 188762829 188762981 -14322551 - MIR SINE MIR -62 146 20 582 268 14 23 chr5 188763338 188763554 -14321978 + MIR SINE MIR 21 233 -29 628 248 61 57 chr5 188764225 188764471 -14321061 + L2 LINE L2 3065 3311 -2 2113 106 3 13 chr5 188764995 188765297 -14320235 - AluSc SINE Alu -10 299 1 428 314 76 31 chr5 188765307 188765664 -14319868 - L1ME4a LINE L1 -42 6079 5707 2132 104 10 10 chr5 188767008 188767317 -14318215 + AluSx SINE Alu 1 309 -3 412 307 75 79 chr5 188770062 188770290 -14315242 - L2 LINE L2 -28 3244 3018 222 116 42 53 chr5 188770367 188770462 -14315070 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 326 196 62 52 chr5 188770463 188770560 -14314972 - L1MCa LINE L1 -4335 2091 1994 33 56 0 0 chr5 188770562 188770616 -14314916 + AT_rich Low_complexity Low_complexity 1 54 0 626 251 72 11 chr5 188770616 188770818 -14314714 - MIR SINE MIR -26 236 21 24 0 0 0 chr5 188771054 188771078 -14314454 + AT_rich Low_complexity Low_complexity 1 24 0 191 313 102 39 chr5 188772227 188772355 -14313177 - L2 LINE L2 -1 3312 3177 377 288 52 31 chr5 188772592 188772783 -14312749 - MLT1J2 LTR MaLR -241 209 15 209 327 93 23 chr5 188772810 188773024 -14312508 - L2 LINE L2 -215 3057 2829 597 196 0 45 chr5 188773148 188773260 -14312272 + FLAM_C SINE Alu 3 109 -34 1640 130 112 0 chr5 188773342 188773611 -14311921 + AluJo SINE Alu 1 299 -13 190 273 9 118 chr5 188773611 188773721 -14311811 - L2 LINE L2 -618 2696 2599 2139 96 0 3 chr5 188774574 188774867 -14310665 + AluSc SINE Alu 1 292 -17 191 267 253 0 chr5 188774885 188774960 -14310572 + L2 LINE L2 3155 3248 -24 2850 53 8 11 chr5 188775208 188775564 -14309968 - THE1A LTR MaLR 0 355 1 321 304 30 60 chr5 188775718 188775919 -14309613 - MLT1K LTR MaLR -253 335 141 317 194 11 97 chr5 188776698 188776791 -14308741 - L2 LINE L2 0 3313 3229 1897 129 0 0 chr5 188777073 188777353 -14308179 + AluSx SINE Alu 21 300 -12 529 257 21 53 chr5 188777415 188777602 -14307930 - L2 LINE L2 -225 3047 2867 351 289 46 101 chr5 188777933 188778300 -14307232 + L2 LINE L2 2909 3255 -17 201 39 0 0 chr5 188778300 188778326 -14307206 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 259 317 67 0 chr5 188778348 188778452 -14307080 - L3 LINE CR1 -219 1358 1248 540 0 0 0 chr5 188778468 188778528 -14307004 + (TA)n Simple_repeat Simple_repeat 2 61 0 2291 105 0 6 chr5 188778530 188778844 -14306688 - AluSx SINE Alu 0 312 1 235 221 39 158 chr5 188779032 188779159 -14306373 - MIR SINE MIR -69 139 28 53 0 0 0 chr5 188779242 188779295 -14306237 + AT_rich Low_complexity Low_complexity 1 53 0 1425 138 13 0 chr5 188779536 188779760 -14305772 + AluSg/x SINE Alu 82 308 -4 757 203 13 13 chr5 188779763 188779921 -14305611 + MER58B DNA MER1_type 183 340 -1 226 233 50 0 chr5 188779921 188779981 -14305551 + MIR SINE MIR 199 261 -1 2015 130 0 0 chr5 188780232 188780532 -14305000 - AluY SINE Alu -11 300 1 342 297 18 9 chr5 188780533 188780644 -14304888 + L2 LINE L2 3192 3303 -10 2283 63 0 3 chr5 188781187 188781497 -14304035 + AluSq SINE Alu 1 309 0 540 0 0 0 chr5 188782339 188782399 -14303133 + (CA)n Simple_repeat Simple_repeat 2 61 0 2602 153 24 2 chr5 188785357 188785807 -14299725 - MER65C LTR ERV1 0 461 2 511 249 80 114 chr5 188786763 188787149 -14298383 - MLT1J LTR MaLR -47 464 92 325 289 167 44 chr5 188787360 188787564 -14297968 + MIR SINE MIR 34 262 0 2190 100 0 13 chr5 188787570 188787871 -14297661 + AluSx SINE Alu 1 297 -15 211 289 0 0 chr5 188787872 188787917 -14297615 + (CAT)n Simple_repeat Simple_repeat 3 47 0 339 295 85 0 chr5 188788616 188788745 -14296787 - MER91C DNA MER1_type 0 140 1 2126 117 10 0 chr5 188788827 188789136 -14296396 - AluSx SINE Alu 0 312 1 879 125 9 148 chr5 188789673 188790017 -14295515 - AluSx SINE Alu -6 296 1 2200 94 3 10 chr5 188790905 188791204 -14294328 + AluSx SINE Alu 1 297 -15 517 209 209 13 chr5 188791367 188791520 -14294012 + MER5A DNA MER1_type 7 189 0 471 333 42 6 chr5 188793616 188793781 -14291751 + MIR SINE MIR 21 191 -71 2031 143 0 32 chr5 188793785 188794099 -14291433 + AluSx SINE Alu 1 304 -8 320 192 0 0 chr5 188794348 188794400 -14291132 - L2 LINE L2 -45 3227 3176 261 0 0 0 chr5 188794407 188794436 -14291096 + (TG)n Simple_repeat Simple_repeat 1 29 0 892 209 6 11 chr5 188794661 188794843 -14290689 + FRAM SINE Alu 1 176 0 285 287 170 0 chr5 188794880 188794974 -14290558 - L2 LINE L2 0 3313 3204 1020 133 0 0 chr5 188794998 188795178 -14290354 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 293 290 159 33 chr5 188795805 188796019 -14289513 - L2 LINE L2 -139 3174 2934 1755 185 42 0 chr5 188797050 188797337 -14288195 + AluJo SINE Alu 1 299 -13 2343 104 0 13 chr5 188797516 188797832 -14287700 + AluSq SINE Alu 1 312 -1 463 253 22 101 chr5 188797842 188797910 -14287622 + MIR SINE MIR 59 131 -131 2378 93 0 3 chr5 188797910 188798221 -14287311 - AluY SINE Alu 0 311 2 463 253 22 101 chr5 188798221 188798330 -14287202 + MIR SINE MIR 131 222 -40 2598 56 0 0 chr5 188798377 188798680 -14286852 - AluY SINE Alu -8 303 1 593 236 0 6 chr5 188799372 188799537 -14285995 + GA-rich Low_complexity Low_complexity 2 165 0 2350 116 0 0 chr5 188799720 188800031 -14285501 + AluSx SINE Alu 1 311 -1 1218 242 33 52 chr5 188800082 188800251 -14285281 - MER113 DNA MER1_type? -26 495 324 2161 126 3 13 chr5 188800251 188800560 -14284972 - AluSx SINE Alu -6 306 1 1218 242 33 52 chr5 188800560 188800749 -14284783 - MER113 DNA MER1_type? -197 324 145 2381 100 0 0 chr5 188800749 188801059 -14284473 - AluSg SINE Alu 0 310 1 1218 242 33 52 chr5 188801059 188801157 -14284375 - MER113 DNA MER1_type? -376 145 47 330 115 0 0 chr5 188801157 188801209 -14284323 + (TA)n Simple_repeat Simple_repeat 2 53 0 215 239 22 0 chr5 188801260 188801306 -14284226 + L2 LINE L2 3253 3299 -14 183 244 0 24 chr5 188801271 188801312 -14284220 + MIR SINE MIR 220 259 -3 * 2348 97 3 0 chr5 188801380 188801680 -14283852 - AluSx SINE Alu -11 301 1 911 284 114 44 chr5 188801978 188802571 -14282961 - L2 LINE L2 0 3313 2675 2416 77 3 0 chr5 188802571 188802869 -14282663 - AluSg SINE Alu -11 299 1 911 284 114 44 chr5 188802869 188803028 -14282504 - L2 LINE L2 -638 2675 2529 1388 188 114 31 chr5 188803028 188803175 -14282357 + L1MB7 LINE L1 5595 5728 -452 2383 77 0 7 chr5 188803175 188803472 -14282060 + AluSc SINE Alu 1 295 -14 1388 188 114 31 chr5 188803472 188803834 -14281698 + L1MB7 LINE L1 5728 6166 -14 1366 116 0 16 chr5 188803856 188804045 -14281487 + AluSq SINE Alu 1 186 -127 2361 79 3 3 chr5 188804261 188804552 -14280980 + AluSx SINE Alu 1 291 -21 229 320 0 27 chr5 188804720 188804795 -14280737 + L2 LINE L2 3241 3313 0 814 241 85 13 chr5 188804797 188805021 -14280511 - MIR SINE MIR -11 251 12 377 188 94 42 chr5 188806391 188806487 -14279045 - MER5A DNA MER1_type -80 109 9 186 71 0 0 chr5 188808129 188808157 -14277375 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 215 111 0 56 chr5 188808881 188808935 -14276597 + (TAAAAA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr5 188808998 188809019 -14276513 + AT_rich Low_complexity Low_complexity 1 21 0 2487 88 7 0 chr5 188809229 188809537 -14275995 - AluSx SINE Alu -2 310 1 321 265 12 0 chr5 188809964 188810047 -14275485 - MIR SINE MIR -2 260 177 284 267 26 60 chr5 188810049 188810165 -14275367 - L2 LINE L2 -1 3271 3160 2336 106 0 0 chr5 188810219 188810520 -14275012 + AluSq SINE Alu 1 301 -12 2524 72 0 0 chr5 188811742 188812047 -14273485 + AluY SINE Alu 1 305 -6 325 273 0 73 chr5 188812058 188812168 -14273364 + MIR SINE MIR 2 103 -159 2193 131 0 3 chr5 188812340 188812645 -14272887 - AluSq SINE Alu -9 304 1 2535 96 0 0 chr5 188813172 188813484 -14272048 - AluSx SINE Alu 0 312 1 189 194 0 0 chr5 188813653 188813684 -14271848 + MER5B DNA MER1_type 75 105 -73 515 359 51 13 chr5 188814638 188814872 -14270660 + MIR SINE MIR 20 262 0 233 299 93 0 chr5 188814968 188815065 -14270467 + MIR SINE MIR 73 178 -84 382 349 10 26 chr5 188815843 188816035 -14269497 - MLT1K LTR MaLR -87 501 313 185 256 384 12 chr5 188816175 188816261 -14269271 + L2 LINE L2 3173 3290 -23 2060 99 3 46 chr5 188816366 188816668 -14268864 + AluSx SINE Alu 1 289 -23 2504 71 3 0 chr5 188816697 188816994 -14268538 + AluSp SINE Alu 1 298 -15 770 197 106 15 chr5 188817417 188817615 -14267917 - MER20 DNA MER1_type -3 216 1 1572 202 97 32 chr5 188818812 188819184 -14266348 - MSTD LTR MaLR 0 396 1 403 351 32 16 chr5 188819288 188819473 -14266059 + MIR SINE MIR 5 192 -70 509 219 102 0 chr5 188819958 188820086 -14265446 - MER63A DNA MER1_type 0 210 70 2460 84 0 13 chr5 188820253 188820564 -14264968 + AluSx SINE Alu 5 311 -1 739 257 24 9 chr5 188821009 188821219 -14264313 + LTR16A LTR ERVL 230 442 -8 369 43 0 0 chr5 188821496 188821543 -14263989 + (TG)n Simple_repeat Simple_repeat 1 47 0 2165 95 39 0 chr5 188821615 188821900 -14263632 + AluSx SINE Alu 1 296 -16 235 297 16 0 chr5 188822258 188822322 -14263210 - L2 LINE L2 0 3272 3208 1697 121 100 32 chr5 188823008 188823149 -14262383 - AluJb SINE Alu -13 299 169 2361 96 0 0 chr5 188823149 188823440 -14262092 - AluSx SINE Alu -16 296 6 1697 121 100 32 chr5 188823440 188823578 -14261954 - AluJb SINE Alu -143 169 1 200 219 47 62 chr5 188823605 188823669 -14261863 - MER5B DNA MER1_type -61 117 55 189 276 81 46 chr5 188824491 188824578 -14260954 - L2 LINE L2 -9 3263 3174 2623 122 18 52 chr5 188824599 188824636 -14260896 - MSTB LTR MaLR 0 426 389 2317 99 7 7 chr5 188824636 188824939 -14260593 + AluSc SINE Alu 1 303 -6 2623 122 18 52 chr5 188824939 188825163 -14260369 - MSTB LTR MaLR -37 389 184 2057 155 3 0 chr5 188825163 188825472 -14260060 + AluSx SINE Alu 1 310 -2 2623 122 18 52 chr5 188825472 188825650 -14259882 - MSTB LTR MaLR -242 184 1 694 243 33 69 chr5 188825650 188825983 -14259549 - L1MC4 LINE L1 -84 7958 7638 1935 142 27 0 chr5 188825996 188826291 -14259241 - AluSx SINE Alu -9 303 1 2040 122 37 0 chr5 188826320 188826614 -14258918 + AluSx SINE Alu 1 305 -7 182 353 116 55 chr5 188826893 188827290 -14258242 - L2 LINE L2 -24 3248 2828 707 229 57 75 chr5 188827652 188827831 -14257701 + MER58A DNA MER1_type 1 177 -2243 1966 108 90 14 chr5 188827831 188828119 -14257413 - AluSp SINE Alu -3 310 1 707 229 57 75 chr5 188828119 188828166 -14257366 + MER58A DNA MER1_type 177 223 -1 256 317 21 7 chr5 188828221 188828363 -14257169 - MER103 DNA DNA -11 155 12 2200 129 0 6 chr5 188828430 188828741 -14256791 + AluSx SINE Alu 1 309 -3 305 301 13 26 chr5 188828947 188829103 -14256429 + CT-rich Low_complexity Low_complexity 3 156 0 192 77 0 0 chr5 188829105 188829131 -14256401 + (TC)n Simple_repeat Simple_repeat 1 26 0 398 289 13 20 chr5 188829141 188829293 -14256239 + CT-rich Low_complexity Low_complexity 2 152 0 753 12 0 0 chr5 188829320 188829406 -14256126 + (GAAAA)n Simple_repeat Simple_repeat 5 90 0 355 143 159 0 chr5 188830689 188830752 -14254780 - 5S rRNA rRNA -33 88 16 225 329 12 99 chr5 188830981 188831046 -14254486 - MER5B DNA MER1_type -1 177 108 2155 128 0 7 chr5 188831046 188831343 -14254189 + AluSx SINE Alu 1 295 -17 225 329 12 99 chr5 188831343 188831438 -14254094 - MER5B DNA MER1_type -70 108 31 578 301 146 5 chr5 188831494 188831713 -14253819 + MIR SINE MIR 4 253 -9 1761 153 3 46 chr5 188832353 188832679 -14252853 - AluSx SINE Alu 0 312 1 259 287 223 14 chr5 188832743 188832915 -14252617 + MIR SINE MIR 19 228 -34 312 274 18 109 chr5 188832929 188833214 -14252318 - MLT1J LTR MaLR 0 511 253 350 291 168 39 chr5 188833593 188833796 -14251736 + MIR SINE MIR 34 262 0 2238 98 0 23 chr5 188833802 188834108 -14251424 + AluSx SINE Alu 1 299 -13 200 275 0 0 chr5 188834116 188834156 -14251376 + (CACCAT)n Simple_repeat Simple_repeat 5 44 0 2785 83 18 0 chr5 188836081 188836465 -14249067 - Tigger1 DNA MER2_type -899 1519 1129 259 135 48 29 chr5 188836465 188836569 -14248963 + (TA)n Simple_repeat Simple_repeat 2 107 0 2235 164 17 5 chr5 188836575 188836997 -14248535 - L1MD1 LINE L1 -311 5931 5505 1083 235 97 65 chr5 188837286 188837676 -14247856 + L2 LINE L2 2726 3151 -162 706 216 41 6 chr5 188837676 188837847 -14247685 + MER104 DNA MER2_type 1 177 -3 1083 235 97 65 chr5 188837847 188838016 -14247516 + L2 LINE L2 3151 3313 0 279 246 198 8 chr5 188838371 188838497 -14247035 - MIR SINE MIR -11 251 102 2555 69 0 20 chr5 188838596 188838945 -14246587 + THE1C LTR MaLR 34 375 0 312 266 49 53 chr5 188839246 188839424 -14246108 - HAL1 LINE L1 -1 6053 2334 673 180 23 41 chr5 188839487 188839659 -14245873 - L1MC4a LINE L1 -1866 5942 5774 1145 260 281 23 chr5 188839792 188840354 -14245178 - L2 LINE L2 -1601 1713 1007 424 299 189 1 chr5 188840563 188840746 -14244786 + MIR SINE MIR 20 233 -29 608 222 86 65 chr5 188841188 188841379 -14244153 + MIR SINE MIR 1 191 -71 1970 138 21 0 chr5 188841379 188841668 -14243864 + AluSq SINE Alu 1 295 -18 608 222 86 65 chr5 188841668 188841711 -14243821 + MIR SINE MIR 191 232 -30 619 215 136 0 chr5 188841858 188842011 -14243521 + MER5A DNA MER1_type 4 180 -9 292 269 96 53 chr5 188841953 188842161 -14243371 - MIR SINE MIR 0 262 46 * 295 313 10 0 chr5 188842486 188842585 -14242947 + L2 LINE L2 3172 3271 -1 234 347 0 20 chr5 188843917 188844015 -14241517 - L2 LINE L2 -34 3279 3184 337 246 99 95 chr5 188844161 188844371 -14241161 - MIR SINE MIR -16 246 38 641 305 32 0 chr5 188845020 188845207 -14240325 - MIR SINE MIR -6 256 64 209 156 0 0 chr5 188845697 188845729 -14239803 - MIR SINE MIR -162 100 69 399 219 141 8 chr5 188846198 188846326 -14239206 - MLT1K LTR MaLR -68 520 376 312 298 9 26 chr5 188846466 188846580 -14238952 - MLT1K LTR MaLR -473 115 4 213 39 0 0 chr5 188846806 188846832 -14238700 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 242 216 0 0 chr5 188846901 188846952 -14238580 + MER113 DNA MER1_type? 2 52 -469 * 748 288 7 32 chr5 188846950 188846988 -14238544 + MER113 DNA MER1_type? 216 253 -268 2356 91 7 3 chr5 188846988 188847286 -14238246 + AluSx SINE Alu 1 299 -13 748 288 7 32 chr5 188847286 188847528 -14238004 + MER113 DNA MER1_type? 253 489 -32 193 250 303 0 chr5 188848183 188848259 -14237273 + MIR SINE MIR 154 252 -10 229 227 0 0 chr5 188848315 188848376 -14237156 + MIR SINE MIR 103 164 -44 806 219 28 131 chr5 188848563 188848711 -14236821 + MIR SINE MIR 9 116 -146 2248 128 0 0 chr5 188848711 188849008 -14236524 - AluSx SINE Alu -15 297 1 806 219 28 131 chr5 188849008 188849142 -14236390 + MIR SINE MIR 116 262 0 203 314 67 29 chr5 188849759 188849864 -14235668 + MIR3 SINE MIR 65 173 -35 2382 106 0 0 chr5 188850163 188850474 -14235058 - AluSx SINE Alu -1 311 1 322 346 121 41 chr5 188851123 188851335 -14234197 - L2 LINE L2 -5 3267 3073 2471 91 0 0 chr5 188851335 188851643 -14233889 + AluSq SINE Alu 1 308 -5 322 346 121 41 chr5 188851643 188851820 -14233712 - L2 LINE L2 -199 3073 2847 234 237 0 0 chr5 188852005 188852081 -14233451 + GA-rich Low_complexity Low_complexity 1 76 0 180 287 160 43 chr5 188853320 188853414 -14232118 - L2 LINE L2 0 3272 3168 270 0 0 0 chr5 188853427 188853457 -14232075 + (CA)n Simple_repeat Simple_repeat 2 31 0 414 0 0 0 chr5 188853572 188853618 -14231914 + (TG)n Simple_repeat Simple_repeat 1 46 0 189 322 69 11 chr5 188854442 188854529 -14231003 + MIR3 SINE MIR 11 102 -106 246 308 128 15 chr5 188854539 188854672 -14230860 - MIR3 SINE MIR -9 199 52 545 211 94 8 chr5 188854676 188854804 -14230728 + MIR SINE MIR 63 201 -61 1174 201 34 93 chr5 188854937 188855157 -14230375 - L1ME1 LINE L1 -76 6090 5859 342 0 0 0 chr5 188855157 188855195 -14230337 + (TG)n Simple_repeat Simple_repeat 2 39 0 1668 171 14 7 chr5 188855197 188855477 -14230055 - AluJb SINE Alu -30 282 1 1174 201 34 93 chr5 188855477 188855660 -14229872 - L1ME1 LINE L1 -308 5858 5708 1464 222 85 28 chr5 188855660 188856168 -14229364 - HsTC2 DNA Tc2 -18 1880 1344 457 250 43 14 chr5 188856281 188856421 -14229111 - HsTC2 DNA Tc2 -1754 144 1 199 276 0 17 chr5 188856424 188856482 -14229050 + MIR SINE MIR 200 256 -6 180 111 0 0 chr5 188856482 188856509 -14229023 + (TTA)n Simple_repeat Simple_repeat 1 27 0 252 229 71 0 chr5 188856510 188856580 -14228952 + MIR SINE MIR 117 191 -71 230 247 114 108 chr5 188856684 188856850 -14228682 - MIR3 SINE MIR -23 185 19 274 305 110 30 chr5 188857177 188857341 -14228191 - MIR SINE MIR -30 232 56 285 293 121 0 chr5 188857782 188857881 -14227651 + MIR3 SINE MIR 83 193 -15 2374 100 0 3 chr5 188857926 188858237 -14227295 + AluSq SINE Alu 3 312 -1 285 272 130 11 chr5 188858239 188858331 -14227201 - MIR SINE MIR -3 259 157 425 224 17 52 chr5 188858334 188858450 -14227082 + MIR SINE MIR 151 262 0 * 768 203 0 7 chr5 188858436 188858584 -14226948 - MIR SINE MIR -101 161 15 2265 114 0 3 chr5 188859366 188859672 -14225860 + AluSx SINE Alu 1 305 -7 257 190 203 13 chr5 188859731 188859810 -14225722 + MIR SINE MIR 74 167 -95 490 239 35 14 chr5 188859879 188860021 -14225511 - MIR SINE MIR -106 156 12 463 320 72 10 chr5 188860155 188860349 -14225183 - MIR SINE MIR -6 256 51 209 184 0 0 chr5 188862297 188862335 -14223197 + (TG)n Simple_repeat Simple_repeat 2 39 0 2268 95 48 0 chr5 188862927 188863221 -14222311 - AluSq SINE Alu -5 308 1 2325 30 44 0 chr5 188863444 188863743 -14221789 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr5 188863976 188863997 -14221535 + AT_rich Low_complexity Low_complexity 1 21 0 1283 104 0 0 chr5 188864214 188864378 -14221154 - AluSp SINE Alu -13 300 137 271 217 48 24 chr5 188864424 188864507 -14221025 - L2 LINE L2 0 3313 3229 354 286 109 8 chr5 188865188 188865307 -14220225 + MIR SINE MIR 24 154 -108 * 523 279 62 11 chr5 188865304 188865483 -14220049 - MIR SINE MIR -4 258 71 1022 166 0 0 chr5 188865537 188865694 -14219838 - FRAM SINE Alu -25 151 1 2248 122 10 0 chr5 188866017 188866320 -14219212 - AluSq SINE Alu -7 306 1 195 171 57 0 chr5 188866327 188866362 -14219170 - L2 LINE L2 -13 3300 3264 395 243 36 9 chr5 188867231 188867342 -14218190 - MIR SINE MIR -61 147 34 246 299 0 0 chr5 188867959 188868026 -14217506 + (TATATG)n Simple_repeat Simple_repeat 3 69 0 204 40 0 0 chr5 188868144 188868169 -14217363 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 399 21 0 0 chr5 188868168 188868216 -14217316 + (TG)n Simple_repeat Simple_repeat 2 49 0 450 272 103 31 chr5 188868619 188868814 -14216718 - MIR SINE MIR -2 260 52 222 179 149 75 chr5 188868952 188869019 -14216513 + L2 LINE L2 3172 3243 -29 836 191 0 0 chr5 188869732 188869863 -14215669 + FLAM_A SINE Alu 3 133 0 2389 83 3 3 chr5 188869893 188870193 -14215339 + AluY SINE Alu 2 301 -10 3167 272 93 32 chr5 188870256 188871696 -14213836 - L2 LINE L2 0 3313 1783 2357 107 3 0 chr5 188871707 188872017 -14213515 - AluSx SINE Alu -1 311 1 2212 123 7 0 chr5 188872193 188872495 -14213037 - AluSx SINE Alu -8 304 1 5901 164 18 9 chr5 188872545 188874569 -14210963 + L1PA16 LINE L1 4115 6156 -10 340 313 88 45 chr5 188874599 188874995 -14210537 - L1ME LINE L1 -331 5790 5378 2430 100 0 0 chr5 188875542 188875841 -14209691 - AluSp SINE Alu -14 299 1 199 256 0 0 chr5 188875852 188875891 -14209641 + MER5B DNA MER1_type 27 65 -113 1596 193 24 20 chr5 188875894 188876303 -14209229 + L1ME2 LINE L1 4891 5301 -845 1102 153 112 102 chr5 188876308 188876602 -14208930 + AluJo SINE Alu 6 302 -10 1786 205 83 15 chr5 188876605 188877084 -14208448 + L1ME2 LINE L1 5435 5946 -218 508 289 38 5 chr5 188876908 188877119 -14208413 + L1MB1 LINE L1 5767 5984 -184 * 238 209 23 0 chr5 188877207 188877250 -14208282 + MER5B DNA MER1_type 132 175 -3 657 226 58 19 chr5 188877622 188877777 -14207755 - MER5B DNA MER1_type -4 174 14 612 251 22 77 chr5 188877777 188877960 -14207572 - MER5B DNA MER1_type -5 173 1 688 284 71 40 chr5 188877976 188878316 -14207216 + L1MC/D LINE L1 5474 5819 -395 2375 109 0 3 chr5 188879034 188879347 -14206185 + AluSx SINE Alu 1 312 0 188 327 100 18 chr5 188879477 188879587 -14205945 - MIR3 SINE MIR -53 155 37 244 277 15 0 chr5 188879659 188879724 -14205808 - Charlie8 DNA MER1_type -991 1426 1361 303 271 0 19 chr5 188879758 188879865 -14205667 - Charlie8 DNA MER1_type -2241 176 72 776 227 37 0 chr5 188880302 188880465 -14205067 + MIR SINE MIR 71 239 -23 476 286 48 0 chr5 188880503 188880709 -14204823 - L1ME LINE L1 -428 5693 5478 421 177 0 13 chr5 188880846 188880925 -14204607 - AluS SINE Alu -7 302 225 1343 103 6 6 chr5 188881031 188881205 -14204327 - AluSq SINE Alu -139 174 1 555 295 130 60 chr5 188881677 188881859 -14203673 + L2 LINE L2 2538 2706 -607 970 152 30 5 chr5 188881859 188882057 -14203475 + L1MB3 LINE L1 5980 6182 -1 555 295 130 60 chr5 188882057 188882505 -14203027 + L2 LINE L2 2706 3218 -95 245 123 0 35 chr5 188882602 188882659 -14202873 - AluJ/FRAM SINE Alu -21 281 227 1940 89 0 16 chr5 188882779 188883027 -14202505 - AluSc SINE Alu -65 244 1 354 311 24 22 chr5 188883076 188883226 -14202306 - L1MC4 LINE L1 0 8042 7773 2397 106 0 3 chr5 188883337 188883648 -14201884 - AluSx SINE Alu -2 310 1 563 254 71 74 chr5 188883885 188884208 -14201324 - L1MC4a LINE L1 -318 7490 7169 1270 230 124 21 chr5 188884362 188884701 -14200831 + MLT1A2 LTR MaLR 1 374 0 581 292 39 47 chr5 188885003 188885236 -14200296 + MIR SINE MIR 30 260 -2 2057 141 0 13 chr5 188885246 188885910 -14199622 + AluSx SINE Alu 1 660 0 1414 166 12 8 chr5 188886210 188886457 -14199075 + L1MDa LINE L1 20 267 -6273 * 2718 174 49 33 chr5 188886453 188887124 -14198408 + L1MDa LINE L1 1047 1728 -4812 618 331 111 25 chr5 188887371 188887731 -14197801 + L2 LINE L2 2923 3313 0 489 268 22 83 chr5 188887752 188888024 -14197508 - MIR SINE MIR -7 255 5 1764 89 5 5 chr5 188888597 188888864 -14196668 + AluSq SINE Alu 70 336 0 316 336 34 17 chr5 188889253 188889372 -14196160 + MIR SINE MIR 23 143 -65 389 310 69 25 chr5 188890849 188891052 -14194480 - MIR SINE MIR -45 217 6 308 95 0 0 chr5 188891159 188891221 -14194311 + Alu SINE Alu 248 309 0 2292 106 0 3 chr5 188891223 188891525 -14194007 + AluSx SINE Alu 1 301 -11 381 266 185 22 chr5 188891525 188891709 -14193823 + MIR SINE MIR 4 217 -45 2058 92 11 25 chr5 188892293 188892595 -14192937 - AluSx SINE Alu 0 302 5 278 219 31 10 chr5 188893524 188893620 -14191912 + (CGG)n Simple_repeat Simple_repeat 1 98 0 6943 60 8 53 chr5 188894711 188895866 -14189666 + SVA Other Other 432 1386 0 395 345 121 10 chr5 188895891 188896097 -14189435 + L1M4c LINE L1 1371 1599 -4785 392 206 21 78 chr5 188896255 188896368 -14189164 + MIR SINE MIR 91 196 -66 2776 88 5 5 chr5 188896368 188896743 -14188789 - THE1C LTR MaLR 0 375 1 392 206 21 78 chr5 188896743 188896770 -14188762 + MIR SINE MIR 196 223 -39 355 304 52 36 chr5 188896872 188897066 -14188466 - MLT1K LTR MaLR -379 209 13 231 213 33 0 chr5 188897539 188897582 -14187950 + (CATA)n Simple_repeat Simple_repeat 1 48 -15 1541 122 0 0 chr5 188897582 188897796 -14187736 + AluSg/x SINE Alu 83 296 -14 231 213 33 0 chr5 188897796 188897813 -14187719 + (CATA)n Simple_repeat Simple_repeat 48 63 0 355 200 154 39 chr5 188897813 188897943 -14187589 + L1ME3 LINE L1 5541 5685 -479 816 200 15 41 chr5 188897954 188898149 -14187383 + AluJo SINE Alu 115 304 -8 1720 213 118 8 chr5 188898160 188898606 -14186926 + L1ME3 LINE L1 5678 6331 -3 374 240 167 13 chr5 188898706 188898856 -14186676 + MER112 DNA MER1_type 87 259 -1 281 299 45 8 chr5 188898861 188898995 -14186537 - L2 LINE L2 -557 2757 2619 372 281 55 60 chr5 188899319 188899392 -14186140 - MIR SINE MIR -18 244 172 1652 127 35 19 chr5 188899392 188899651 -14185881 - AluJb SINE Alu -11 301 39 372 281 55 60 chr5 188899651 188899776 -14185756 - MIR SINE MIR -90 172 47 1361 194 47 40 chr5 188899781 188900080 -14185452 + AluJo SINE Alu 5 305 -7 622 195 25 0 chr5 188900084 188900202 -14185330 + FLAM_C SINE Alu 10 130 -13 3620 139 38 7 chr5 188900896 188901477 -14184055 + MER4D LTR ERV1 1 599 -304 21141 55 4 0 chr5 188901480 188904918 -14180614 - L1PA5 LINE L1 -1 6153 2708 912 69 17 0 chr5 188904918 188905034 -14180498 - L1P LINE L1 -2512 3634 3517 17940 103 12 31 chr5 188905061 188907806 -14177726 - L1PA5 LINE L1 -3444 2702 11 1649 118 42 82 chr5 188907825 188908131 -14177401 + MER4E LTR ERV1 486 779 0 339 78 0 0 chr5 188908140 188908191 -14177341 + (TC)n Simple_repeat Simple_repeat 2 52 0 257 51 26 0 chr5 188908191 188908230 -14177302 + (CA)n Simple_repeat Simple_repeat 1 40 0 187 146 36 36 chr5 188909792 188909847 -14175685 + GA-rich Low_complexity Low_complexity 2 56 0 398 266 85 17 chr5 188909909 188910086 -14175446 + L2 LINE L2 1711 1899 -1415 216 0 0 0 chr5 188910127 188910151 -14175381 + (A)n Simple_repeat Simple_repeat 1 24 0 292 291 58 0 chr5 188910481 188910584 -14174948 - MIR SINE MIR -85 177 69 1894 164 6 16 chr5 188911345 188911478 -14174054 + AluJb SINE Alu 1 134 -178 2159 119 3 13 chr5 188911478 188911789 -14173743 + AluSx SINE Alu 1 308 -4 1894 164 6 16 chr5 188911789 188911967 -14173565 + AluJb SINE Alu 134 309 -3 450 336 36 31 chr5 188912125 188912348 -14173184 + L1ME3A LINE L1 919 1142 -4977 667 202 0 16 chr5 188912357 188912486 -14173046 + FLAM_C SINE Alu 9 135 -8 411 326 39 52 chr5 188912488 188912524 -14173008 + HAL1 LINE L1 1241 1276 -1231 1892 147 0 11 chr5 188912524 188912835 -14172697 - AluJo SINE Alu 0 308 1 411 326 39 52 chr5 188912835 188913030 -14172502 + HAL1 LINE L1 1276 1470 -1037 483 134 0 0 chr5 188913134 188913216 -14172316 + (GA)n Simple_repeat Simple_repeat 2 83 0 1482 239 77 29 chr5 188913216 188913533 -14171999 - L1ME3A LINE L1 -34 6136 5793 1028 183 4 89 chr5 188913533 188913768 -14171764 - MER20 DNA MER1_type -4 215 1 1482 239 77 29 chr5 188913768 188913868 -14171664 - L1ME3A LINE L1 -377 5793 5699 315 0 0 0 chr5 188914307 188914342 -14171190 + (TA)n Simple_repeat Simple_repeat 1 35 0 1527 201 68 12 chr5 188914704 188915135 -14170397 + L1ME3A LINE L1 2708 5382 -785 811 129 73 0 chr5 188915147 188915271 -14170261 - FLAM_C SINE Alu 0 133 1 2351 148 14 29 chr5 188915331 188915744 -14169788 + L1MA9 LINE L1 5886 6292 -20 377 105 0 0 chr5 188915746 188915803 -14169729 + L1MA9 LINE L1 6251 6307 -5 2389 233 22 40 chr5 188915830 188915885 -14169647 + L1ME3A LINE L1 5455 5509 -644 1887 135 39 0 chr5 188915885 188916166 -14169366 - AluJo SINE Alu -20 292 1 2389 233 22 40 chr5 188916166 188916780 -14168752 + L1ME3A LINE L1 5509 6102 -51 1931 160 0 13 chr5 188916780 188917086 -14168446 - AluJo SINE Alu -10 302 1 2389 233 22 40 chr5 188917086 188917137 -14168395 + L1ME3A LINE L1 6102 6152 -1 247 281 0 0 chr5 188917142 188917206 -14168326 - MIR SINE MIR -183 79 16 1348 198 42 100 chr5 188917269 188917577 -14167955 - MLT2D LTR ERVL -15 505 118 2064 205 79 118 chr5 188917577 188917917 -14167615 + MER21B LTR ERV1 1 353 -510 701 193 0 22 chr5 188917917 188918052 -14167480 + FLAM_A SINE Alu 2 133 0 2064 205 79 118 chr5 188918052 188918064 -14167468 + MER21B LTR ERV1 353 364 -499 1893 135 25 14 chr5 188918064 188918365 -14167167 + AluSx SINE Alu 1 304 0 2064 205 79 118 chr5 188918365 188918844 -14166688 + MER21B LTR ERV1 364 802 -61 22 0 0 0 chr5 188918934 188918956 -14166576 + AT_rich Low_complexity Low_complexity 1 22 0 560 182 0 0 chr5 188918956 188919055 -14166477 - MLT2D LTR ERVL -315 99 1 1728 158 0 23 chr5 188919254 188919520 -14166012 + AluJo SINE Alu 5 264 -48 270 136 0 0 chr5 188919555 188919599 -14165933 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1706 156 91 0 chr5 188919841 188920116 -14165416 - AluJb SINE Alu -12 300 1 2038 145 7 0 chr5 188920118 188920414 -14165118 - AluSx SINE Alu -14 298 1 2957 145 47 14 chr5 188920597 188921088 -14164444 - MER84 LTR ERV1 0 507 1 495 77 39 13 chr5 188921091 188921169 -14164363 - MER84 LTR ERVI -427 80 1 329 289 151 18 chr5 188921181 188921406 -14164126 + L1MC/D LINE L1 4797 5051 -1095 243 0 0 0 chr5 188921453 188921480 -14164052 + (T)n Simple_repeat Simple_repeat 1 27 0 288 283 35 90 chr5 188922370 188922693 -14162839 + L1MC/D LINE L1 5274 5586 -747 2015 217 194 75 chr5 188922894 188923746 -14161786 + LTR28 LTR ERV1 1 953 -67 258 295 18 45 chr5 188923771 188923883 -14161649 + LTR27 LTR ERV1 528 636 0 498 339 83 9 chr5 188923890 188924309 -14161223 + L2 LINE L2 2409 2858 -456 2388 224 73 20 chr5 188924472 188924888 -14160644 - L1MC4 LINE L1 -7 8035 7568 1840 146 3 14 chr5 188924888 188925175 -14160357 - AluJo SINE Alu -28 284 1 2388 224 73 20 chr5 188925175 188925442 -14160090 - L1MC4 LINE L1 -474 7568 7316 743 244 183 26 chr5 188925901 188926250 -14159282 + HAL1 LINE L1 1304 1707 -800 688 196 0 0 chr5 188926569 188926681 -14158851 + FRAM SINE Alu 1 112 -64 1553 73 0 0 chr5 188927630 188927809 -14157723 + AluSq SINE Alu 22 200 -113 222 118 0 0 chr5 188927832 188927866 -14157666 + (A)n Simple_repeat Simple_repeat 1 34 0 610 275 55 5 chr5 188928061 188928279 -14157253 + MIR SINE MIR 28 256 -6 383 311 0 15 chr5 188928722 188928857 -14156675 - MIR3 SINE MIR -73 135 3 489 121 48 12 chr5 188928916 188928999 -14156533 + FLAM_A SINE Alu 37 122 -20 2178 118 3 0 chr5 188929002 188929298 -14156234 + AluSq SINE Alu 1 297 -16 737 278 45 8 chr5 188929299 188929544 -14155988 - MIR SINE MIR 0 262 9 749 266 32 53 chr5 188930029 188930311 -14155221 + LTR16A1 LTR ERVL 180 455 -2 2068 309 66 44 chr5 188930318 188931616 -14153916 + HERV16 LTR ERVL 5 1331 -3665 744 334 82 8 chr5 188931631 188932320 -14153212 + HERVL LTR ERVL 4369 5160 -604 1077 263 39 22 chr5 188932634 188932991 -14152541 + LTR16A1 LTR ERVL 1 363 -94 425 247 72 72 chr5 188932995 188933161 -14152371 + MER45A DNA AcHobo 13 178 0 255 230 138 11 chr5 188933161 188933243 -14152289 + LTR16A1 LTR ERVL 351 443 -14 240 293 21 0 chr5 188933572 188933700 -14151832 - MIR SINE MIR -65 143 15 2219 113 10 0 chr5 188934070 188934370 -14151162 - AluSx SINE Alu -9 303 1 223 342 27 0 chr5 188934449 188934560 -14150972 - L3 LINE CR1 -348 1229 1116 705 273 125 52 chr5 188934574 188935014 -14150518 - MLT1K LTR MaLR -2 586 115 337 95 206 0 chr5 188935123 188935186 -14150346 + L1PA13 LINE L1 6088 6163 0 27 0 0 0 chr5 188935240 188935267 -14150265 + AT_rich Low_complexity Low_complexity 1 27 0 446 240 96 41 chr5 188935773 188935919 -14149613 - MIR SINE MIR -89 173 20 414 341 32 36 chr5 188936179 188936431 -14149101 + MIR SINE MIR 2 252 -10 391 333 0 8 chr5 188936429 188936555 -14148977 + L2 LINE L2 3144 3268 -4 * 1048 204 156 48 chr5 188936773 188937125 -14148407 + MLT1B LTR MaLR 1 390 0 363 210 185 8 chr5 188937132 188937251 -14148281 - L2 LINE L2 -349 2965 2826 2262 112 0 0 chr5 188937339 188937644 -14147888 - AluSx SINE Alu -7 305 1 370 141 56 14 chr5 188938231 188938302 -14147230 + MER84 LTR ERVI 1 74 -433 3284 98 64 17 chr5 188938303 188938785 -14146747 + MER84 LTR ERV1 3 507 0 902 211 42 21 chr5 188938866 188939056 -14146476 + MER20 DNA MER1_type 1 194 -25 189 107 0 0 chr5 188939130 188939158 -14146374 + (CA)n Simple_repeat Simple_repeat 1 28 0 460 256 16 8 chr5 188939300 188939421 -14146111 + L2 LINE L2 3189 3310 -3 410 275 56 28 chr5 188939899 188940077 -14145455 + MLT1F1 LTR MaLR 379 561 -6 263 323 39 0 chr5 188940092 188940222 -14145310 + MLT1F1-int LTR MaLR 5 139 -1232 1624 207 0 22 chr5 188940494 188940808 -14144724 + AluJb SINE Alu 1 307 -5 207 0 0 0 chr5 188941504 188941527 -14144005 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 28941 57 3 1 chr5 188941529 188945982 -14139550 + L1PA5 LINE L1 1693 6146 -8 345 172 0 0 chr5 188946059 188946123 -14139409 + MIR SINE MIR 186 249 -13 395 335 60 0 chr5 188946722 188946904 -14138628 + L2 LINE L2 2625 2817 -497 185 371 0 0 chr5 188946904 188946974 -14138558 + L2 LINE L2 2733 2802 -512 238 286 57 0 chr5 188947237 188947307 -14138225 - MER5C DNA MER1_type -250 74 1 3745 131 8 21 chr5 188947331 188947944 -14137588 - MER6A DNA MER2_type 0 605 1 384 22 0 0 chr5 188948450 188948495 -14137037 + (CA)n Simple_repeat Simple_repeat 1 45 0 357 326 30 22 chr5 188948550 188948685 -14136847 - L2 LINE L2 -1 3271 3136 1854 124 40 4 chr5 188948736 188949048 -14136484 + AluSx SINE Alu 1 322 0 537 317 98 5 chr5 188949192 188949397 -14136135 - MIR SINE MIR -34 228 5 293 345 84 53 chr5 188949662 188950276 -14135256 - L2 LINE L2 -3 3269 2676 686 180 0 65 chr5 188950276 188950415 -14135117 - FLAM_A SINE Alu -1 132 3 293 345 84 53 chr5 188950415 188950427 -14135105 - L2 LINE L2 -596 2676 2666 2121 101 4 0 chr5 188950427 188950726 -14134806 - AluSx SINE Alu 0 304 5 293 345 84 53 chr5 188950726 188951010 -14134522 - L2 LINE L2 -606 2666 2326 582 314 89 28 chr5 188951372 188951620 -14133912 + L2 LINE L2 3046 3308 -5 865 181 0 0 chr5 188951703 188951871 -14133661 - FLAM_A SINE Alu 0 168 1 370 268 269 29 chr5 188952011 188952567 -14132965 + L2 LINE L2 2622 3308 -5 225 197 0 0 chr5 188952584 188952645 -14132887 + (ATG)n Simple_repeat Simple_repeat 3 63 0 390 147 0 0 chr5 188952790 188952858 -14132674 + (TG)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 188953433 188953454 -14132078 + AT_rich Low_complexity Low_complexity 1 21 0 1519 126 0 0 chr5 188953454 188953669 -14131863 + AluSq SINE Alu 3 217 -96 2304 71 0 29 chr5 188953674 188953982 -14131550 + AluY SINE Alu 1 299 -12 432 242 22 28 chr5 188953984 188954115 -14131417 - MIR3 SINE MIR -54 154 20 207 0 0 0 chr5 188954694 188954717 -14130815 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1738 152 0 28 chr5 188954721 188955004 -14130528 + AluJo SINE Alu 1 275 -37 295 204 0 0 chr5 188955005 188955059 -14130473 + AluJ/monomer SINE Alu 238 291 -10 1944 113 0 0 chr5 188955265 188955522 -14130010 + AluSx SINE Alu 44 300 -12 2378 89 0 7 chr5 188955616 188955918 -14129614 - AluY SINE Alu -11 300 1 245 132 0 0 chr5 188955918 188955956 -14129576 - MSTC LTR MaLR -12 416 379 * 332 174 291 0 chr5 188955945 188956031 -14129501 - FLAM_C SINE Alu -17 116 6 672 184 0 0 chr5 188956032 188956141 -14129391 - AluJo/FLAM SINE Alu -203 109 1 640 166 79 7 chr5 188956228 188956367 -14129165 - MSTC LTR MaLR -218 210 62 269 245 84 112 chr5 188956426 188956493 -14129039 - MIR SINE MIR -71 191 124 1301 201 7 53 chr5 188956493 188956797 -14128735 + AluJo SINE Alu 1 290 -22 269 245 84 112 chr5 188956797 188956872 -14128660 - MIR SINE MIR -138 124 53 664 199 106 31 chr5 188956902 188956957 -14128575 - FAM SINE Alu -148 173 124 4384 114 3 2 chr5 188956957 188957591 -14127941 - MER41B LTR ERV1 0 635 1 664 199 106 31 chr5 188957591 188957696 -14127836 - FAM SINE Alu -197 124 1 262 258 41 41 chr5 188957721 188957818 -14127714 + MIR SINE MIR 160 256 -6 218 312 165 0 chr5 188958055 188958164 -14127368 + MIR3 SINE MIR 33 159 -49 208 333 65 33 chr5 188958206 188958359 -14127173 + MIR SINE MIR 95 252 -10 213 39 0 0 chr5 188958920 188958946 -14126586 + (CGG)n Simple_repeat Simple_repeat 3 28 0 24 53 0 0 chr5 188959086 188959124 -14126408 + GC_rich Low_complexity Low_complexity 1 38 0 313 274 18 0 chr5 188959812 188959925 -14125607 - L1ME4a LINE L1 -56 6065 5951 31 0 0 0 chr5 188960473 188960504 -14125028 + AT_rich Low_complexity Low_complexity 1 31 0 1168 114 0 29 chr5 188960883 188961058 -14124474 + AluJo SINE Alu 1 170 -142 2083 106 0 3 chr5 188961343 188961653 -14123879 + AluSg SINE Alu 1 309 0 1610 161 65 17 chr5 188962713 188963004 -14122528 - AluJb SINE Alu -7 305 1 2236 111 3 0 chr5 188963642 188963940 -14121592 - AluSx SINE Alu -13 299 1 7414 13 5 6 chr5 188964143 188965004 -14120528 + L1PA3 LINE L1 5296 6155 0 333 0 0 0 chr5 188965074 188965111 -14120421 + (T)n Simple_repeat Simple_repeat 1 37 0 1794 103 13 17 chr5 188965477 188965779 -14119753 + HERVH LTR ERV1 7413 7713 0 919 170 117 81 chr5 188965781 188966175 -14119357 + LTR7 LTR ERV1 3 410 -40 1687 133 0 4 chr5 188966179 188966419 -14119113 + AluSc SINE Alu 62 300 -9 399 287 185 14 chr5 188966998 188967214 -14118318 + MIR SINE MIR 10 262 0 2479 60 0 10 chr5 188968115 188968429 -14117103 - AluY SINE Alu 0 311 1 1639 197 10 3 chr5 188968470 188968759 -14116773 - AluJo SINE Alu -20 292 2 2547 42 0 26 chr5 188969038 188969349 -14116183 + AluY SINE Alu 1 303 -8 180 0 0 0 chr5 188969479 188969499 -14116033 + (TA)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr5 188969499 188969521 -14116011 + (T)n Simple_repeat Simple_repeat 1 22 0 1497 164 8 12 chr5 188970653 188970897 -14114635 + AluJb SINE Alu 44 286 -26 1445 241 8 80 chr5 188971214 188971486 -14114046 - MER20B DNA MER1_type -220 563 273 2144 109 3 3 chr5 188971486 188971771 -14113761 + AluSx SINE Alu 1 285 -27 221 56 0 28 chr5 188971771 188971807 -14113725 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1445 241 8 80 chr5 188971807 188972069 -14113463 - MER20B DNA MER1_type -508 275 67 28 0 0 0 chr5 188972632 188972660 -14112872 + AT_rich Low_complexity Low_complexity 1 28 0 789 139 23 23 chr5 188972660 188972789 -14112743 - FLAM_C SINE Alu -4 129 1 1555 172 14 24 chr5 188973798 188974089 -14111443 + AluJo SINE Alu 5 292 -20 654 235 199 5 chr5 188975010 188975276 -14110256 - L1MC/D LINE L1 -468 5653 5352 342 344 19 14 chr5 188975283 188975495 -14110037 - L1MC/D LINE L1 -990 5156 4944 710 123 26 13 chr5 188976433 188976587 -14108945 + Charlie5 DNA MER1_type 2469 2624 0 275 79 0 0 chr5 188977477 188977515 -14108017 - tRNA-Gly-GGA tRNA tRNA -37 38 1 207 100 0 0 chr5 188977857 188977887 -14107645 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 714 255 92 87 chr5 188977891 188978260 -14107272 - L2 LINE L2 -15 3298 2928 990 177 56 17 chr5 188978942 188979174 -14106358 - L1MC1 LINE L1 0 6333 6093 30 0 0 0 chr5 188979279 188979309 -14106223 + AT_rich Low_complexity Low_complexity 1 30 0 1262 171 108 37 chr5 188979538 188979807 -14105725 - AluJo SINE Alu -24 288 1 2189 55 13 45 chr5 188980066 188980376 -14105156 + AluY SINE Alu 1 300 -11 700 197 0 0 chr5 188980584 188980711 -14104821 + FLAM_A SINE Alu 14 140 -2 1017 161 154 18 chr5 188982788 188982983 -14102549 + MER33 DNA MER1_type 1 249 -2336 2176 110 7 0 chr5 188982983 188983274 -14102258 + AluSx SINE Alu 1 293 -19 1017 161 154 18 chr5 188983274 188983363 -14102169 + MER33 DNA MER1_type 249 324 0 203 200 55 73 chr5 188987647 188987702 -14097830 + MIR SINE MIR 100 153 -55 1724 175 33 33 chr5 188988125 188988491 -14097041 - MER47A DNA MER2_type 0 366 1 1067 137 71 0 chr5 188988580 188988748 -14096784 + AluSg/x SINE Alu 106 285 -27 267 31 0 0 chr5 188988748 188988780 -14096752 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 329 235 0 15 chr5 188990097 188990165 -14095367 + L2 LINE L2 3157 3223 -49 1046 166 136 72 chr5 188990278 188990447 -14095085 - AluJo SINE Alu -10 302 108 305 24 24 0 chr5 188990447 188990489 -14095043 + (TG)n Simple_repeat Simple_repeat 2 44 0 1046 166 136 72 chr5 188990489 188990584 -14094948 - AluJo SINE Alu -204 108 21 547 88 12 0 chr5 188990584 188990664 -14094868 - L1MA1 LINE L1 -35 6267 6187 2078 146 0 0 chr5 188991124 188991418 -14094114 + AluSx SINE Alu 1 294 -18 2192 101 0 7 chr5 188991971 188992269 -14093263 + AluY SINE Alu 1 296 -15 758 183 133 124 chr5 188992298 188992392 -14093140 - MER2 DNA MER2_type -3 342 250 1248 150 44 0 chr5 188992392 188992619 -14092913 + L1PA13 LINE L1 5923 6159 -4 758 183 133 124 chr5 188992619 188992863 -14092669 - MER2 DNA MER2_type -95 250 1 556 233 155 0 chr5 188993072 188993278 -14092254 - L1ME1 LINE L1 -4 6162 5925 240 207 12 98 chr5 188993367 188993449 -14092083 - L1MB8 LINE L1 -161 6017 5943 590 164 75 0 chr5 188993454 188993469 -14092063 - L1MB8 LINE L1 -270 5904 5890 1435 208 124 8 chr5 188993469 188994266 -14091266 - L1MC3 LINE L1 -468 5698 4939 216 0 0 0 chr5 188994266 188994290 -14091242 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1435 208 124 8 chr5 188994290 188994333 -14091199 - L1MC3 LINE L1 -1227 4939 4902 401 227 47 67 chr5 188994383 188994472 -14091060 + L1MA10 LINE L1 6180 6266 -68 1919 121 53 0 chr5 188994472 188994753 -14090779 - AluSx SINE Alu -16 296 1 401 227 47 67 chr5 188994753 188994813 -14090719 + L1MA10 LINE L1 6266 6326 -8 1133 103 0 7 chr5 188994971 188995146 -14090386 - AluSx SINE Alu 0 302 129 4575 38 4 6 chr5 188995153 188995700 -14089832 - L1PA3 LINE L1 -5 6150 5605 9983 20 0 1 chr5 188995700 188997077 -14088455 + L1PA3 LINE L1 4235 5610 -545 1133 110 0 0 chr5 188997077 188997222 -14088310 - AluSx SINE Alu -167 145 1 1809 175 0 23 chr5 188997286 188997594 -14087938 - AluJb SINE Alu -11 301 1 767 165 0 8 chr5 188997599 188997726 -14087806 - FLAM_A SINE Alu -7 126 1 378 346 17 22 chr5 188997833 188998012 -14087520 - MIR3 SINE MIR -12 196 19 1651 181 29 0 chr5 188998080 188998357 -14087175 + AluJo SINE Alu 3 287 -25 734 218 0 0 chr5 188998519 188998652 -14086880 + AluJo/FLAM SINE Alu 1 133 -169 1976 145 10 3 chr5 188998654 188998957 -14086575 + AluSx SINE Alu 1 305 -7 304 238 114 19 chr5 188998966 188999071 -14086461 + MIR SINE MIR 46 160 -102 861 251 50 85 chr5 188999076 188999498 -14086034 + MLT1I LTR MaLR 3 409 0 611 226 28 42 chr5 188999798 189000015 -14085517 - L2 LINE L2 -2223 1091 878 553 107 320 13 chr5 189000484 189000634 -14084898 + MER76 LTR ERV 3 198 -490 1090 247 92 6 chr5 189000690 189001018 -14084514 + MER76 LTR ERV 315 670 -18 394 213 21 11 chr5 189001265 189001359 -14084173 - MER5B DNA MER1_type -1 177 83 316 290 24 32 chr5 189001396 189001520 -14084012 + MIR SINE MIR 57 179 -83 875 245 96 77 chr5 189001749 189001773 -14083759 + MER115 DNA AcHobo 29 51 -642 2188 114 3 3 chr5 189001773 189002072 -14083460 - AluSx SINE Alu -13 299 1 875 245 96 77 chr5 189002072 189002098 -14083434 + MER115 DNA AcHobo 51 75 -618 2515 83 3 0 chr5 189002098 189002410 -14083122 + AluSp SINE Alu 1 313 0 875 245 96 77 chr5 189002410 189002775 -14082757 + MER115 DNA AcHobo 75 453 -240 2196 109 0 13 chr5 189002921 189003225 -14082307 + AluSx SINE Alu 1 300 -12 182 229 0 0 chr5 189003262 189003297 -14082235 + MIR SINE MIR 220 254 -8 612 137 0 0 chr5 189003840 189003935 -14081597 - AluJb SINE Alu -5 307 213 500 92 0 0 chr5 189003932 189003997 -14081535 - AluJ/FRAM SINE Alu -32 280 216 * 818 111 8 16 chr5 189003997 189004123 -14081409 - AluSg/x SINE Alu -32 278 154 2053 131 3 16 chr5 189004152 189004458 -14081074 - AluSx SINE Alu -10 302 1 1356 194 47 77 chr5 189004645 189005046 -14080486 + MLT1B LTR MaLR 2 390 0 1552 150 113 0 chr5 189005192 189005458 -14080074 - AluSx SINE Alu -14 298 3 257 357 58 13 chr5 189006040 189006194 -14079338 + MIR SINE MIR 25 185 -77 1256 146 146 35 chr5 189006352 189006639 -14078893 + AluJo SINE Alu 1 315 0 283 296 80 31 chr5 189007273 189007435 -14078097 + MIR SINE MIR 20 189 -73 433 246 155 50 chr5 189007593 189007870 -14077662 + MLT1I LTR MaLR 89 394 -15 184 167 19 19 chr5 189008772 189008826 -14076706 + (CCG)n Simple_repeat Simple_repeat 3 56 0 300 111 0 0 chr5 189008904 189008958 -14076574 + (A)n Simple_repeat Simple_repeat 1 54 0 308 256 40 16 chr5 189008964 189009089 -14076443 + L1M4 LINE L1 3073 3200 -2946 207 203 0 76 chr5 189009090 189009169 -14076363 + A-rich Low_complexity Low_complexity 2 74 0 318 237 18 30 chr5 189009171 189009406 -14076126 + GA-rich Low_complexity Low_complexity 1 232 0 293 160 64 24 chr5 189009524 189009649 -14075883 + C-rich Low_complexity Low_complexity 6 135 0 30 0 0 0 chr5 189009783 189009813 -14075719 + GC_rich Low_complexity Low_complexity 1 30 0 273 211 20 40 chr5 189010235 189010387 -14075145 + A-rich Low_complexity Low_complexity 5 153 0 180 0 0 0 chr5 189010586 189010606 -14074926 + (GA)n Simple_repeat Simple_repeat 1 20 0 1533 196 48 51 chr5 189010917 189011330 -14074202 + MLT2D LTR ERVL 1 412 -2 648 275 50 29 chr5 189011331 189011439 -14074093 - LTR16C LTR ERVL -27 464 360 1574 158 0 114 chr5 189011439 189011781 -14073751 + AluJo SINE Alu 3 305 -7 648 275 50 29 chr5 189011781 189011912 -14073620 - LTR16C LTR ERVL -131 360 220 300 30 0 88 chr5 189011929 189011964 -14073568 - MSTB2 LTR MaLR -32 425 389 1771 178 10 3 chr5 189011964 189012267 -14073265 - AluJo SINE Alu -7 305 1 300 30 0 88 chr5 189012267 189012285 -14073247 - MSTB2 LTR MaLR -68 389 347 718 193 0 15 chr5 189012318 189012453 -14073079 - FLAM_A SINE Alu 0 133 1 396 273 108 26 chr5 189012827 189012995 -14072537 - MLT1I LTR MaLR -8 426 252 333 210 52 46 chr5 189013055 189013192 -14072340 - AluJb SINE Alu -66 236 175 902 128 0 15 chr5 189013743 189013876 -14071656 + AluJ SINE Alu 1 131 -171 2589 64 0 3 chr5 189013880 189014192 -14071340 + AluY SINE Alu 1 311 0 315 0 0 0 chr5 189014199 189014234 -14071298 + (TA)n Simple_repeat Simple_repeat 1 35 0 426 183 45 0 chr5 189014464 189014573 -14070959 - L1MA4A LINE L1 0 6279 6044 * 469 163 12 0 chr5 189014562 189014648 -14070884 - L1MA4A LINE L1 -181 6122 6036 1919 130 45 3 chr5 189014648 189014817 -14070715 - AluSx SINE Alu -8 304 117 639 0 0 0 chr5 189014817 189014888 -14070644 + (TG)n Simple_repeat Simple_repeat 2 72 0 1919 130 45 3 chr5 189014888 189015010 -14070522 - AluSx SINE Alu -195 117 1 23 68 0 0 chr5 189015318 189015362 -14070170 + AT_rich Low_complexity Low_complexity 1 44 0 1342 122 0 16 chr5 189015771 189015960 -14069572 + AluJ SINE Alu 107 292 -20 601 107 0 0 chr5 189015963 189016047 -14069485 - L1MA4A LINE L1 -362 5941 5858 1048 96 27 34 chr5 189016234 189016380 -14069152 + AluSq/x SINE Alu 1 145 -167 672 178 0 8 chr5 189016381 189016499 -14069033 - AluJb SINE Alu -40 272 156 582 239 202 33 chr5 189016684 189016956 -14068576 - L1M1 LINE L1 -4457 1925 1565 273 206 159 0 chr5 189017233 189017296 -14068236 + HsTC2 DNA Tc2 3 75 -1823 964 212 157 25 chr5 189017342 189017705 -14067827 + HsTC2 DNA Tc2 1299 1885 -13 2384 83 0 16 chr5 189017823 189018136 -14067396 - AluSc SINE Alu 0 309 2 561 214 13 84 chr5 189018312 189018389 -14067143 + FRAM SINE Alu 16 78 -234 2316 104 0 7 chr5 189018389 189018696 -14066836 + AluSx SINE Alu 1 305 -7 561 214 13 84 chr5 189018696 189018772 -14066760 + FRAM SINE Alu 78 158 -18 2276 105 3 0 chr5 189019002 189019306 -14066226 - AluSp SINE Alu -8 305 1 230 260 0 0 chr5 189019776 189019826 -14065706 + MLT1L LTR MaLR 126 175 -440 200 151 57 75 chr5 189020072 189020125 -14065407 + MIR SINE MIR 93 144 -118 837 195 0 46 chr5 189021460 189021634 -14063898 + FRAM SINE Alu 1 166 0 2303 107 0 0 chr5 189022267 189022576 -14062956 + AluSx SINE Alu 1 309 -3 406 224 0 13 chr5 189022586 189022662 -14062870 + FLAM_A SINE Alu 1 75 -57 503 311 87 47 chr5 189023440 189023865 -14061667 + L1ME3 LINE L1 463 904 -5626 550 158 50 10 chr5 189024271 189024372 -14061160 + FLAM_A SINE Alu 12 116 -26 1991 193 27 87 chr5 189024530 189025161 -14060371 + L1MC4a LINE L1 7211 7803 -5 639 243 59 122 chr5 189025252 189025972 -14059560 + L1ME3 LINE L1 1408 2141 -4548 186 43 0 0 chr5 189025992 189026015 -14059517 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1873 197 95 77 chr5 189026015 189026091 -14059441 + L1ME3 LINE L1 5716 5789 -767 2007 153 3 0 chr5 189026091 189026386 -14059146 + AluSx SINE Alu 1 296 -16 1873 197 95 77 chr5 189026386 189026405 -14059127 + L1ME3 LINE L1 5789 5806 -750 1984 74 0 48 chr5 189026405 189026675 -14058857 + AluY SINE Alu 54 310 -1 1873 197 95 77 chr5 189026675 189026798 -14058734 + L1ME3 LINE L1 5806 5925 -631 3203 74 35 5 chr5 189026798 189027229 -14058303 + MLT2A1 LTR ERVL 1 444 0 1873 197 95 77 chr5 189027229 189027559 -14057973 + L1ME3 LINE L1 5925 6340 -216 1818 156 52 0 chr5 189027559 189027848 -14057684 + AluJb SINE Alu 1 304 -8 1873 197 95 77 chr5 189027848 189028034 -14057498 + L1ME3 LINE L1 6340 6521 -35 1567 125 114 18 chr5 189028185 189028466 -14057066 + MSTA LTR MaLR 88 395 -33 25 0 0 0 chr5 189028494 189028519 -14057013 + AT_rich Low_complexity Low_complexity 1 25 0 200 250 78 16 chr5 189029630 189029694 -14055838 - MER5B DNA MER1_type 0 178 111 1677 190 3 7 chr5 189029725 189030020 -14055512 - AluJo SINE Alu -16 296 3 246 128 0 0 chr5 189030032 189030071 -14055461 + (A)n Simple_repeat Simple_repeat 1 39 0 257 307 36 21 chr5 189030660 189030800 -14054732 + MER5B DNA MER1_type 2 143 -35 21 57 0 0 chr5 189030947 189030982 -14054550 + AT_rich Low_complexity Low_complexity 1 35 0 2386 89 7 0 chr5 189031065 189031369 -14054163 - AluY SINE Alu -5 306 1 26 0 0 0 chr5 189031370 189031396 -14054136 + AT_rich Low_complexity Low_complexity 1 26 0 1289 194 74 28 chr5 189031672 189031955 -14053577 - AluJb SINE Alu -16 296 1 280 355 58 0 chr5 189032034 189032155 -14053377 + Tigger8 DNA MER2_type 25 152 -514 327 259 121 58 chr5 189032324 189032671 -14052861 + Tigger8 DNA MER2_type 239 607 -59 849 158 0 0 chr5 189033986 189034119 -14051413 - FLAM_C SINE Alu 0 133 1 322 229 137 30 chr5 189034405 189034536 -14050996 - MIR SINE MIR -1 261 117 564 234 31 8 chr5 189034551 189034679 -14050853 + MIR SINE MIR 2 132 -130 1464 164 13 76 chr5 189034703 189034873 -14050659 - AluJb SINE Alu -15 297 118 2497 55 3 0 chr5 189034873 189035165 -14050367 - AluY SINE Alu -17 294 2 2302 96 7 3 chr5 189035166 189035467 -14050065 - AluSc SINE Alu -7 302 1 1464 164 13 76 chr5 189035467 189035611 -14049921 - AluJb SINE Alu -193 119 1 1430 174 82 48 chr5 189035629 189035922 -14049610 - AluJo SINE Alu -9 303 1 1359 210 121 100 chr5 189035950 189036869 -14048663 + L1MC5 LINE L1 6685 7584 -377 2002 132 0 0 chr5 189036869 189037142 -14048390 + AluSx SINE Alu 31 303 -9 1359 210 121 100 chr5 189037142 189037200 -14048332 + L1MC5 LINE L1 7584 7639 -322 781 160 24 0 chr5 189037200 189037325 -14048207 + FLAM_C SINE Alu 1 128 -5 216 0 0 0 chr5 189037325 189037349 -14048183 + (TA)n Simple_repeat Simple_repeat 2 25 0 1359 210 121 100 chr5 189037349 189037585 -14047947 + L1MC5 LINE L1 7638 7925 -36 23 78 0 0 chr5 189037787 189037838 -14047694 + AT_rich Low_complexity Low_complexity 1 51 0 2179 75 0 0 chr5 189037966 189038232 -14047300 - AluSx SINE Alu -8 304 39 227 298 12 0 chr5 189038673 189038757 -14046775 - L1 LINE L1 -1699 4447 4363 21 0 0 0 chr5 189039123 189039144 -14046388 + AT_rich Low_complexity Low_complexity 1 21 0 2249 95 3 49 chr5 189039478 189039805 -14045727 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 189040305 189040333 -14045199 + AT_rich Low_complexity Low_complexity 1 28 0 1810 168 27 7 chr5 189040377 189040675 -14044857 - AluJb SINE Alu -8 304 1 28 29 0 0 chr5 189040682 189040717 -14044815 + AT_rich Low_complexity Low_complexity 1 35 0 1783 177 0 23 chr5 189040727 189041026 -14044506 - AluJb SINE Alu -20 292 1 21 82 0 0 chr5 189041187 189041236 -14044296 + AT_rich Low_complexity Low_complexity 1 49 0 1814 174 0 31 chr5 189041443 189041765 -14043767 - AluJo SINE Alu 0 312 1 739 163 70 0 chr5 189042049 189042178 -14043354 + MSTA LTR MaLR 244 381 -47 21 36 0 0 chr5 189042499 189042527 -14043005 + AT_rich Low_complexity Low_complexity 1 28 0 349 312 80 14 chr5 189042607 189042745 -14042787 + L2 LINE L2 3123 3269 -3 239 235 33 189 chr5 189042909 189042927 -14042605 + L2 LINE L2 2526 2545 -769 2298 85 0 7 chr5 189042927 189043220 -14042312 + AluY SINE Alu 1 291 -20 239 235 33 189 chr5 189043220 189043316 -14042216 + L2 LINE L2 2545 2654 -660 2254 101 3 3 chr5 189043316 189043612 -14041920 - AluSg SINE Alu -14 296 1 239 235 33 189 chr5 189043612 189043726 -14041806 + L2 LINE L2 2654 2680 -634 732 172 0 0 chr5 189043726 189043842 -14041690 - FLAM_C SINE Alu -15 118 3 239 235 33 189 chr5 189043842 189043977 -14041555 + L2 LINE L2 2680 2834 -480 1049 213 0 0 chr5 189044835 189045009 -14040523 - FAM SINE Alu 0 175 2 368 252 16 37 chr5 189045450 189045592 -14039940 - MIR SINE MIR -62 146 22 1193 56 7 0 chr5 189046055 189046199 -14039333 - AluSg/x SINE Alu -9 303 159 219 315 102 28 chr5 189047635 189047743 -14037789 + L2 LINE L2 3137 3252 -20 180 0 0 0 chr5 189047743 189047763 -14037769 + (A)n Simple_repeat Simple_repeat 1 20 0 323 265 127 31 chr5 189047966 189048159 -14037373 - MIR SINE MIR -56 206 2 688 181 29 82 chr5 189048325 189048496 -14037036 - FRAM SINE Alu -14 162 1 2031 141 0 0 chr5 189048543 189048855 -14036677 - AluSx SINE Alu 0 312 1 392 93 0 0 chr5 189049270 189049324 -14036208 + FRAM/FAM SINE Alu 28 81 -94 2230 97 3 0 chr5 189049598 189049897 -14035635 + AluSp SINE Alu 3 302 -11 1384 198 19 23 chr5 189050390 189050698 -14034834 + AluJo SINE Alu 2 308 -4 2057 137 0 0 chr5 189051282 189051588 -14033944 + AluSx SINE Alu 1 306 -6 2090 76 0 23 chr5 189052328 189052629 -14032903 - AluY SINE Alu -17 294 1 621 248 224 12 chr5 189053555 189053805 -14031727 - L2 LINE L2 0 3313 3011 890 140 25 0 chr5 189053811 189053968 -14031564 - L1MA9 LINE L1 0 6312 6152 216 237 0 0 chr5 189053969 189054007 -14031525 + (CG)n Simple_repeat Simple_repeat 2 39 0 1010 169 20 10 chr5 189054030 189054225 -14031307 + AluJo SINE Alu 86 282 -30 1656 157 21 0 chr5 189054279 189054566 -14030966 - L1MA9 LINE L1 -237 6075 5783 262 267 0 53 chr5 189054591 189054666 -14030866 + L2 LINE L2 3191 3261 -52 657 246 40 48 chr5 189054673 189054755 -14030777 - Charlie2a DNA MER1_type -7 2855 2774 1854 165 0 3 chr5 189054755 189055064 -14030468 + AluJb SINE Alu 1 308 -4 657 246 40 48 chr5 189055064 189055325 -14030207 - Charlie2a DNA MER1_type -88 2774 1473 652 112 0 31 chr5 189055387 189055485 -14030047 - Tigger7 DNA MER2_type -4 2583 2489 * 894 230 16 5 chr5 189055483 189055674 -14029858 - Tigger7 DNA MER2_type -2220 267 75 3213 157 82 32 chr5 189055759 189056420 -14029112 + LTR8A LTR ERV1 34 727 0 1878 14 0 0 chr5 189056611 189056821 -14028711 + L1PA5 LINE L1 5939 6148 -6 337 195 316 47 chr5 189056870 189056924 -14028608 - Charlie2 DNA MER1_type -2545 317 279 2821 145 11 11 chr5 189056924 189057372 -14028160 + MER83 LTR ERV1 1 448 0 337 195 316 47 chr5 189057372 189057532 -14028000 - Charlie2 DNA MER1_type -2583 279 45 1483 120 24 72 chr5 189057718 189058009 -14027523 - LTR23 LTR ERV1 0 437 161 567 208 77 0 chr5 189058084 189058214 -14027318 - LTR23 LTR ERV1 -289 148 9 193 286 18 0 chr5 189058218 189058274 -14027258 + L2 LINE L2 3216 3272 0 * 195 231 96 0 chr5 189058270 189058322 -14027210 - L2 LINE L2 -338 2975 2919 464 205 0 0 chr5 189058336 189058414 -14027118 + Tigger3(Golem) DNA MER2_type 28 105 -2924 3909 118 73 40 chr5 189058418 189058674 -14026858 + Tigger3(Golem) DNA MER2_type 2285 2531 -498 539 153 105 32 chr5 189058674 189058798 -14026734 - FLAM_C SINE Alu 0 133 1 3909 118 73 40 chr5 189058798 189058982 -14026550 + Tigger3(Golem) DNA MER2_type 2531 2707 -322 2180 107 0 3 chr5 189058982 189059291 -14026241 - AluSx SINE Alu -4 308 1 3909 118 73 40 chr5 189059291 189059570 -14025962 + Tigger3(Golem) DNA MER2_type 2707 3029 0 2365 64 3 0 chr5 189059586 189059884 -14025648 + AluY SINE Alu 1 299 -12 1475 188 164 56 chr5 189059955 189060514 -14025018 + LTR29 LTR ERV1 1 652 -1 189 303 13 40 chr5 189060521 189060597 -14024935 - L2 LINE L2 -518 2796 2723 2453 48 0 0 chr5 189060620 189060914 -14024618 + AluY SINE Alu 1 294 -17 1595 106 73 73 chr5 189060920 189061040 -14024492 + MLT1B LTR MaLR 1 120 -270 2108 132 0 0 chr5 189061040 189061343 -14024189 + AluSx SINE Alu 1 303 -9 1595 106 73 73 chr5 189061343 189061523 -14024009 + MLT1B LTR MaLR 119 301 -89 218 367 144 7 chr5 189061523 189061662 -14023870 - L2 LINE L2 -698 2616 2459 2099 99 10 0 chr5 189061668 189061960 -14023572 + AluSg SINE Alu 1 295 -15 3632 163 62 14 chr5 189061962 189062650 -14022882 - MER72 LTR ERV1 -1 721 1 400 188 30 83 chr5 189062877 189063010 -14022522 + HAL1b LINE L1 750 875 -473 2170 114 0 3 chr5 189063066 189063374 -14022158 - AluSx SINE Alu -5 307 1 1902 132 3 22 chr5 189063387 189063705 -14021827 - AluSx SINE Alu 0 312 1 2015 167 58 74 chr5 189063838 189064354 -14021178 - LTR54 LTR ERV1 0 510 3 807 103 0 0 chr5 189064454 189064561 -14020971 - AluSg/x SINE Alu -25 287 181 237 135 169 34 chr5 189064770 189064859 -14020673 + MER113 DNA MER1_type? 33 133 -388 441 278 74 17 chr5 189065148 189065324 -14020208 - L2 LINE L2 0 3313 3128 2096 123 0 0 chr5 189065452 189065744 -14019788 + AluSx SINE Alu 13 304 -8 295 286 158 0 chr5 189066134 189066305 -14019227 + L1MC/D LINE L1 5637 5834 -1974 548 127 0 0 chr5 189066329 189066408 -14019124 - AluSg/x SINE Alu -16 296 218 189 279 279 10 chr5 189066675 189066779 -14018753 - L2 LINE L2 0 3313 3182 * 230 266 103 69 chr5 189066774 189066977 -14018555 - L2 LINE L2 -222 3050 2841 223 380 19 9 chr5 189067270 189067378 -14018154 + MIR SINE MIR 21 129 -133 284 234 16 172 chr5 189068731 189068860 -14016672 - MER5A DNA MER1_type 0 189 41 1968 99 45 0 chr5 189068860 189069152 -14016380 - AluSp SINE Alu -3 310 6 284 234 16 172 chr5 189069152 189069164 -14016368 - MER5A DNA MER1_type -148 41 82 1661 60 56 0 chr5 189069164 189069379 -14016153 - AluY SINE Alu -8 303 77 284 234 16 172 chr5 189069379 189069428 -14016104 - MER5A DNA MER1_type -106 83 28 205 118 39 0 chr5 189070473 189070524 -14015008 + T-rich Low_complexity Low_complexity 2 54 0 1004 170 31 54 chr5 189070784 189071008 -14014524 - MER20 DNA MER1_type 0 219 1 346 298 76 23 chr5 189072132 189072303 -14013229 - MIR SINE MIR -74 188 9 2358 57 10 0 chr5 189072430 189072729 -14012803 - AluY SINE Alu -9 302 1 2168 188 36 55 chr5 189073409 189073851 -14011681 + LTR55 LTR ERV 23 455 -93 1822 152 10 3 chr5 189073851 189074160 -14011372 + AluJb SINE Alu 1 311 -1 2168 188 36 55 chr5 189074160 189074245 -14011287 + LTR55 LTR ERV 455 540 -8 417 245 197 32 chr5 189075145 189075333 -14010199 - MIR SINE MIR -11 251 33 1601 271 87 20 chr5 189075508 189076057 -14009475 + MLT1K LTR MaLR 3 588 0 355 237 26 0 chr5 189076115 189076191 -14009341 + MLT1E1 LTR MaLR 1 78 -576 233 146 0 49 chr5 189076193 189076234 -14009298 + MLT1E LTR MaLR 185 223 -401 * 1234 242 86 44 chr5 189076229 189076613 -14008919 + MLT1E LTR MaLR 194 593 0 406 268 30 42 chr5 189077136 189077304 -14008228 + MER5A DNA MER1_type 1 166 -23 2322 72 16 0 chr5 189077627 189077932 -14007600 - AluSp SINE Alu -3 310 1 2078 112 0 10 chr5 189078360 189078663 -14006869 - AluSx SINE Alu -12 300 1 397 291 82 25 chr5 189079280 189079476 -14006056 - MIR SINE MIR -40 222 16 240 181 405 26 chr5 189080098 189080214 -14005318 - MIR SINE MIR 0 262 103 184 177 32 129 chr5 189080321 189080383 -14005149 - L2 LINE L2 0 3272 3217 192 224 61 20 chr5 189080643 189080692 -14004840 + MER5A DNA MER1_type 54 104 -85 433 254 17 25 chr5 189080921 189081039 -14004493 - MIR SINE MIR -131 131 15 1790 147 45 0 chr5 189081497 189081789 -14003743 + AluSx SINE Alu 1 305 -7 381 302 38 11 chr5 189082381 189082548 -14002984 - MIR SINE MIR -50 212 43 2177 89 17 0 chr5 189083059 189083352 -14002180 - AluSg SINE Alu -12 298 1 528 223 119 23 chr5 189083415 189083624 -14001908 + MIR SINE MIR 25 261 -1 236 267 33 44 chr5 189084416 189084506 -14001026 + L2 LINE L2 3139 3227 -45 382 283 24 122 chr5 189085575 189085904 -13999628 + L2 LINE L2 2967 3263 -9 * 795 225 7 0 chr5 189085894 189086045 -13999487 + MIR SINE MIR 12 163 -99 2980 144 4 10 chr5 189086047 189086541 -13998991 + L1MB8 LINE L1 5646 6136 -42 1804 141 11 0 chr5 189086541 189086825 -13998707 + AluSx SINE Alu 24 310 -2 1152 109 0 0 chr5 189086832 189086878 -13998654 + (GA)n Simple_repeat Simple_repeat 1 221 0 1152 109 0 0 chr5 189086878 189087053 -13998479 + (GA)n Simple_repeat Simple_repeat 2 176 0 209 257 0 71 chr5 189087092 189087162 -13998370 + MIR SINE MIR 148 212 -50 753 264 42 5 chr5 189087179 189087372 -13998160 - MIR SINE MIR -3 259 60 818 92 21 42 chr5 189087771 189087913 -13997619 - L1MA5A LINE L1 0 6297 6159 2052 114 0 7 chr5 189088095 189088401 -13997131 - AluSx SINE Alu -8 304 1 262 283 0 0 chr5 189088768 189088821 -13996711 + L2 LINE L2 3148 3200 -72 775 161 97 0 chr5 189088888 189089043 -13996489 - MER20 DNA MER1_type -21 198 29 269 283 44 18 chr5 189089548 189089661 -13995871 - MIR SINE MIR -135 127 12 2265 93 0 3 chr5 189089831 189090141 -13995391 - AluSx SINE Alu -3 309 1 360 206 14 0 chr5 189090416 189090489 -13995043 - MIR3 SINE MIR -53 155 82 318 289 57 31 chr5 189090540 189090699 -13994833 + MIR SINE MIR 79 241 -21 432 280 45 80 chr5 189090721 189090956 -13994576 + MIR SINE MIR 7 234 -28 792 164 0 8 chr5 189090956 189091090 -13994442 - FLAM_C SINE Alu 0 133 1 432 280 45 80 chr5 189091090 189091118 -13994414 + MIR SINE MIR 234 261 -1 534 301 28 85 chr5 189091703 189092022 -13993510 - L2 LINE L2 -36 3236 2936 1320 187 3 37 chr5 189092180 189092501 -13993031 - AluJo SINE Alu 0 312 1 234 189 0 19 chr5 189093330 189093383 -13992149 - MER5A DNA MER1_type -65 124 73 1930 154 0 0 chr5 189093424 189093735 -13991797 + AluJb SINE Alu 1 311 -1 748 262 145 29 chr5 189093951 189094260 -13991272 - HsTC2a DNA Tc2 -1159 739 467 2173 127 0 0 chr5 189094260 189094568 -13990964 - AluSx SINE Alu -3 309 2 748 262 145 29 chr5 189094568 189094808 -13990724 - HsTC2a DNA Tc2 -1431 467 122 282 227 93 0 chr5 189094942 189095017 -13990515 - Charlie8 DNA MER1_type -991 1426 1345 339 314 29 29 chr5 189095163 189095373 -13990159 - L1MC4a LINE L1 -1902 5906 5697 345 246 76 42 chr5 189095951 189096069 -13989463 - MIR SINE MIR -72 190 69 1995 103 0 3 chr5 189096304 189096606 -13988926 - AluSx SINE Alu 0 301 1 2171 87 45 0 chr5 189097618 189097904 -13987628 + AluSg SINE Alu 1 299 -11 244 364 61 0 chr5 189098134 189098266 -13987266 - MIR SINE MIR -6 256 117 282 297 44 33 chr5 189098321 189098412 -13987120 + MIR SINE MIR 17 108 -154 197 375 88 31 chr5 189099162 189099423 -13986109 - L2 LINE L2 -443 2871 2596 2185 85 18 21 chr5 189099611 189099914 -13985618 + AluSg SINE Alu 1 302 0 2535 63 3 0 chr5 189099932 189100232 -13985300 + AluSp SINE Alu 1 301 -12 2573 138 48 21 chr5 189100320 189100798 -13984734 + L1MB3 LINE L1 5686 6176 -7 262 277 59 0 chr5 189101454 189101555 -13983977 - L1MEc LINE L1 -3650 2565 2459 796 242 102 8 chr5 189101568 189101832 -13983700 - L1MEc LINE L1 -3951 2445 2157 1738 256 87 52 chr5 189101846 189101998 -13983534 - L1MEc LINE L1 -4499 1897 1752 2117 138 3 0 chr5 189101998 189102294 -13983238 - AluSg SINE Alu -13 297 1 1738 256 87 52 chr5 189102294 189102883 -13982649 - L1MEc LINE L1 -4644 1752 1109 1823 169 3 20 chr5 189102883 189103184 -13982348 - AluJo SINE Alu -16 296 1 1738 256 87 52 chr5 189103184 189103445 -13982087 - L1MEc LINE L1 -5287 1109 859 430 249 50 80 chr5 189103630 189103831 -13981701 + MLT1J LTR MaLR 308 502 -9 399 318 0 9 chr5 189103837 189103947 -13981585 - L2 LINE L2 -21 3292 3184 657 242 78 7 chr5 189103952 189104105 -13981427 + MER58A DNA MER1_type 13 176 -48 1249 191 54 18 chr5 189104191 189104468 -13981064 - Charlie1b DNA MER1_type -236 287 1 2517 63 3 10 chr5 189104611 189104913 -13980619 + AluSp SINE Alu 1 300 -13 226 294 106 0 chr5 189104961 189105046 -13980486 - L2 LINE L2 -214 3058 2965 188 167 64 167 chr5 189105776 189105854 -13979678 + L2 LINE L2 3207 3276 -37 628 278 45 15 chr5 189105864 189106062 -13979470 - MIR SINE MIR -57 205 2 2231 106 3 13 chr5 189106113 189106414 -13979118 + AluSq SINE Alu 1 298 -15 3306 112 82 121 chr5 189106424 189106648 -13978884 + L1MB3 LINE L1 5389 5620 -563 1712 175 24 3 chr5 189106648 189106939 -13978593 + AluJo SINE Alu 1 297 -15 3306 112 82 121 chr5 189106939 189107012 -13978520 + L1MB3 LINE L1 5620 5694 -489 2202 93 18 0 chr5 189107012 189107313 -13978219 - AluSq SINE Alu 0 306 1 3306 112 82 121 chr5 189107313 189107591 -13977941 + L1MB3 LINE L1 5694 5927 -256 2422 100 0 0 chr5 189107591 189107890 -13977642 + AluSq SINE Alu 1 299 -14 3306 112 82 121 chr5 189107890 189108136 -13977396 + L1MB3 LINE L1 5927 6181 -2 441 297 20 34 chr5 189109240 189109388 -13976144 + MIR3 SINE MIR 31 176 -32 646 242 45 22 chr5 189111059 189111237 -13974295 - MER5A DNA MER1_type -1 188 7 2494 88 3 0 chr5 189111854 189112162 -13973370 - AluSp SINE Alu -4 309 1 494 204 132 51 chr5 189112741 189112839 -13972693 - MER5A DNA MER1_type 0 189 100 2331 94 10 0 chr5 189112839 189113138 -13972394 - AluSx SINE Alu -10 302 1 494 204 132 51 chr5 189113138 189113210 -13972322 - MER5A DNA MER1_type -89 100 4 2040 127 45 0 chr5 189113340 189113632 -13971900 + AluSx SINE Alu 1 305 -7 274 257 9 55 chr5 189113867 189113976 -13971556 - MIR SINE MIR -2 260 157 * 1091 228 49 6 chr5 189113966 189114211 -13971321 + MIR SINE MIR 5 257 -5 1409 168 6 105 chr5 189114211 189114545 -13970987 - AluSx SINE Alu 0 302 2 2188 129 0 19 chr5 189114548 189114859 -13970673 - AluSx SINE Alu -7 305 1 388 194 31 51 chr5 189114859 189114957 -13970575 - MIR SINE MIR -105 157 62 281 263 21 21 chr5 189115414 189115509 -13970023 - MIR SINE MIR -4 258 164 366 168 0 115 chr5 189115511 189115602 -13969930 + L1MC4 LINE L1 7790 7867 -175 1761 166 0 17 chr5 189115602 189115897 -13969635 - AluJo SINE Alu -22 290 1 366 168 0 115 chr5 189115897 189115918 -13969614 + L1MC4 LINE L1 7867 7889 -153 264 242 31 31 chr5 189115925 189116053 -13969479 + (TA)n Simple_repeat Simple_repeat 1 128 0 323 218 18 71 chr5 189116055 189116225 -13969307 + L1MC4 LINE L1 7881 8041 -1 262 140 60 20 chr5 189116278 189116328 -13969204 - MIR SINE MIR -95 167 116 220 322 41 34 chr5 189116472 189116618 -13968914 - L2 LINE L2 -910 2404 2258 227 299 92 58 chr5 189117044 189117218 -13968314 - L2 LINE L2 -889 2425 2246 341 269 174 40 chr5 189117712 189117861 -13967671 + MER5A DNA MER1_type 1 169 -20 2302 84 0 29 chr5 189118538 189118849 -13966683 + AluY SINE Alu 1 302 -9 958 268 37 8 chr5 189119145 189119391 -13966141 + MIR SINE MIR 10 262 0 2311 124 0 0 chr5 189119551 189119857 -13965675 + AluSx SINE Alu 1 306 -6 2233 112 7 0 chr5 189120036 189120332 -13965200 - AluSx SINE Alu -14 298 1 732 206 33 67 chr5 189120541 189120721 -13964811 + MER5B DNA MER1_type 4 177 -1 219 283 127 40 chr5 189120792 189120893 -13964639 - MIR SINE MIR -65 143 37 1016 113 0 0 chr5 189121180 189121313 -13964219 + AluSq/x SINE Alu 1 133 -180 2213 115 17 0 chr5 189121324 189121619 -13963913 + AluSp SINE Alu 1 300 -13 945 206 27 0 chr5 189121748 189121932 -13963600 - MER5A DNA MER1_type 0 189 1 478 260 24 16 chr5 189122348 189122475 -13963057 - MIR SINE MIR -70 192 65 1521 203 7 40 chr5 189122832 189123133 -13962399 - AluJo SINE Alu -21 291 1 373 237 82 0 chr5 189123308 189123405 -13962127 + MIR SINE MIR 97 201 -61 541 178 217 0 chr5 189123433 189123562 -13961970 + MER5A DNA MER1_type 33 189 0 * 583 214 8 38 chr5 189123562 189123690 -13961842 + L2 LINE L2 3189 3312 -1 207 339 83 37 chr5 189123774 189123883 -13961649 + L2 LINE L2 3138 3251 -21 328 272 143 27 chr5 189124010 189124157 -13961375 + L2 LINE L2 3147 3310 -3 276 208 52 73 chr5 189124680 189124776 -13960756 - MIR SINE MIR -48 214 121 2383 99 0 7 chr5 189124792 189125094 -13960438 - AluSq SINE Alu -13 300 1 268 160 3 37 chr5 189125257 189125321 -13960211 + MIR SINE MIR 92 143 -65 572 263 96 79 chr5 189127267 189127353 -13958179 + MIR SINE MIR 19 102 -160 2378 82 0 3 chr5 189127353 189127646 -13957886 - AluSq SINE Alu -21 292 1 572 263 96 79 chr5 189127646 189127799 -13957733 + MIR SINE MIR 102 262 0 2158 115 0 0 chr5 189128113 189128415 -13957117 + AluSx SINE Alu 5 306 0 416 263 40 53 chr5 189128718 189128796 -13956736 + MIR3 SINE MIR 42 119 -89 2544 78 3 0 chr5 189128796 189129103 -13956429 - AluSp SINE Alu -5 308 1 416 263 40 53 chr5 189129103 189129176 -13956356 + MIR3 SINE MIR 119 191 -17 198 129 0 0 chr5 189129226 189129257 -13956275 + L3b LINE CR1 1180 1210 -373 277 289 60 34 chr5 189129288 189129437 -13956095 - MIR SINE MIR -54 208 56 491 308 113 5 chr5 189129620 189129841 -13955691 + MIR SINE MIR 13 257 -5 324 0 0 0 chr5 189130928 189130964 -13954568 + (CA)n Simple_repeat Simple_repeat 2 37 0 353 236 94 31 chr5 189131188 189131315 -13954217 - MIR3 SINE MIR -13 195 61 2178 112 6 10 chr5 189131522 189131834 -13953698 + AluSx SINE Alu 1 311 -1 680 238 121 45 chr5 189131883 189132215 -13953317 - MER113 DNA MER1_type? -159 362 6 264 194 117 48 chr5 189132631 189132734 -13952798 + MIR3 SINE MIR 91 200 -8 285 241 17 0 chr5 189132773 189132831 -13952701 - MIR SINE MIR -59 149 91 231 36 0 0 chr5 189132924 189132952 -13952580 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1301 154 4 41 chr5 189134375 189134642 -13950890 - AluJb SINE Alu -55 257 1 214 286 52 26 chr5 189134873 189134950 -13950582 - MIR SINE MIR -108 154 76 422 299 46 19 chr5 189135264 189135422 -13950110 + MIR SINE MIR 24 189 -62 361 237 25 116 chr5 189135470 189135668 -13949864 + LTR67 LTR ERVL 30 209 -348 230 184 0 0 chr5 189136040 189136078 -13949454 + LTR67 LTR ERVL 520 557 0 198 0 0 0 chr5 189136416 189136438 -13949094 + (A)n Simple_repeat Simple_repeat 1 22 0 2095 125 14 3 chr5 189136938 189137226 -13948306 - AluSq SINE Alu -20 293 3 1883 166 0 14 chr5 189137265 189137561 -13947971 - AluJo SINE Alu -20 292 1 308 252 205 20 chr5 189137844 189137995 -13947537 - MIR SINE MIR -36 226 48 565 303 21 7 chr5 189139101 189139246 -13946286 - MIR SINE MIR -93 169 23 279 114 0 0 chr5 189139527 189139571 -13945961 + (TCC)n Simple_repeat Simple_repeat 2 45 0 2321 88 0 0 chr5 189139743 189140027 -13945505 + AluSq SINE Alu 14 297 -16 1138 234 44 55 chr5 189140042 189140335 -13945197 - L1ME2 LINE L1 -44 6120 5834 2029 132 10 7 chr5 189140335 189140631 -13944901 - AluJo SINE Alu -13 299 3 1138 234 44 55 chr5 189140631 189140742 -13944790 - L1ME2 LINE L1 -330 5834 5723 399 145 0 0 chr5 189140758 189140827 -13944705 + (GGA)n Simple_repeat Simple_repeat 2 70 0 457 220 9 0 chr5 189140833 189140942 -13944590 - L1ME2 LINE L1 -408 5756 5647 1531 176 73 43 chr5 189140942 189141312 -13944220 - MLT1B LTR MaLR -9 381 1 1540 210 70 63 chr5 189141315 189141370 -13944162 - L1ME2 LINE L1 -533 5633 5580 2249 123 0 0 chr5 189141370 189141672 -13943860 + AluSx SINE Alu 1 302 -10 1540 210 70 63 chr5 189141672 189141836 -13943696 - L1ME2 LINE L1 -586 5580 5419 1700 174 16 35 chr5 189141836 189142153 -13943379 - AluJo SINE Alu -1 311 1 1540 210 70 63 chr5 189142153 189142254 -13943278 - L1ME2 LINE L1 -747 5419 5320 2109 122 9 28 chr5 189142254 189142573 -13942959 + AluSq SINE Alu 1 313 0 1540 210 70 63 chr5 189142573 189142893 -13942639 - L1ME2 LINE L1 -846 5320 4986 2299 104 0 3 chr5 189142893 189143191 -13942341 - AluSg SINE Alu -13 297 1 1540 210 70 63 chr5 189143191 189143285 -13942247 - L1ME2 LINE L1 -1180 4986 4894 2318 93 10 7 chr5 189143705 189144006 -13941526 + AluSp SINE Alu 4 305 -8 252 288 137 7 chr5 189144119 189144272 -13941260 - MIR SINE MIR -80 182 10 336 271 124 43 chr5 189144343 189144553 -13940979 + L1ME LINE L1 5394 5620 -2375 383 303 50 36 chr5 189144585 189144657 -13940875 + L1ME LINE L1 5492 5562 -559 2435 83 0 3 chr5 189144657 189144959 -13940573 + AluY SINE Alu 1 301 -10 383 303 50 36 chr5 189144959 189145107 -13940425 + L1ME LINE L1 5562 5715 -406 325 221 0 31 chr5 189145692 189145819 -13939713 + GA-rich Low_complexity Low_complexity 2 124 0 1544 228 15 3 chr5 189145928 189146261 -13939271 + MER58B DNA MER1_type 1 337 -4 376 316 7 39 chr5 189146331 189146486 -13939046 - MIR SINE MIR 0 262 113 311 241 0 69 chr5 189146488 189146575 -13938957 - MER5B DNA MER1_type -2 176 96 327 260 112 41 chr5 189146762 189146931 -13938601 - MIR SINE MIR 0 262 82 509 207 64 0 chr5 189146937 189147077 -13938455 + L1ME3A LINE L1 6022 6170 0 854 179 51 106 chr5 189147182 189147456 -13938076 - MER113 DNA MER1_type? -71 450 192 888 259 77 66 chr5 189147480 189147859 -13937673 + MLT1J LTR MaLR 25 407 -104 2423 94 0 7 chr5 189147861 189148169 -13937363 - AluSx SINE Alu -6 306 1 418 80 0 0 chr5 189148211 189148261 -13937271 - AluJ/F(R)AM SINE Alu -104 208 159 2097 116 45 0 chr5 189148261 189148553 -13936979 - AluSg SINE Alu -5 305 1 192 316 26 0 chr5 189149033 189149109 -13936423 + L2 LINE L2 2635 2712 -602 290 250 42 42 chr5 189149146 189149242 -13936290 - MIR3 SINE MIR -27 181 86 222 148 19 111 chr5 189149515 189149569 -13935963 - L2 LINE L2 -209 3063 3015 454 255 176 0 chr5 189149591 189149744 -13935788 + MIR SINE MIR 81 260 -2 440 325 19 34 chr5 189149864 189150070 -13935462 - MIR SINE MIR -6 256 54 219 294 71 12 chr5 189150098 189150183 -13935349 + MIR SINE MIR 36 125 -83 204 40 0 0 chr5 189150235 189150260 -13935272 + (ATG)n Simple_repeat Simple_repeat 3 27 0 2212 137 0 3 chr5 189150719 189151032 -13934500 - AluSx SINE Alu 0 312 1 22 35 0 0 chr5 189151104 189151133 -13934399 + AT_rich Low_complexity Low_complexity 1 29 0 859 147 0 0 chr5 189151133 189151262 -13934270 - FLAM_C SINE Alu 0 133 5 185 245 19 19 chr5 189151285 189151338 -13934194 - MIR SINE MIR -63 145 93 209 195 0 0 chr5 189152066 189152107 -13933425 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 1655 189 25 28 chr5 189152140 189152499 -13933033 - L1MB2 LINE L1 0 6171 5814 638 158 10 0 chr5 189152507 189152608 -13932924 - FRAM SINE Alu -22 154 53 2600 178 8 36 chr5 189152608 189152770 -13932762 - L1MB2 LINE L1 -350 5821 5656 2278 88 3 3 chr5 189152770 189153097 -13932435 + AluSp SINE Alu 1 327 0 2600 178 8 36 chr5 189153097 189153507 -13932025 - L1MB2 LINE L1 -515 5656 5268 952 285 3 34 chr5 189153642 189153933 -13931599 + L1MC/D LINE L1 5440 5721 -2087 580 272 35 75 chr5 189154159 189154387 -13931145 - MIR SINE MIR -20 242 24 1581 176 81 0 chr5 189154387 189154660 -13930872 - AluJo SINE Alu -11 301 7 435 38 0 0 chr5 189154943 189154996 -13930536 + (CAGC)n Simple_repeat Simple_repeat 3 55 0 472 274 45 22 chr5 189155352 189155531 -13930001 + L1MC/D LINE L1 5566 5748 -2060 187 354 146 0 chr5 189155891 189155987 -13929545 + L2 LINE L2 3141 3250 -22 250 201 58 144 chr5 189156457 189156505 -13929027 - Charlie8 DNA MER1_type -2224 193 142 1969 165 3 3 chr5 189156505 189156802 -13928730 - AluJb SINE Alu -15 297 1 250 201 58 144 chr5 189156802 189156892 -13928640 - Charlie8 DNA MER1_type -2275 142 67 2462 96 3 0 chr5 189156895 189157197 -13928335 + AluSx SINE Alu 1 303 -9 345 286 20 102 chr5 189157346 189157493 -13928039 + MIR3 SINE MIR 20 154 -54 25 0 0 0 chr5 189157866 189157891 -13927641 + AT_rich Low_complexity Low_complexity 1 25 0 811 169 0 0 chr5 189157891 189158015 -13927517 - FLAM_A SINE Alu -9 124 1 1697 158 17 28 chr5 189158482 189158773 -13926759 - AluJb SINE Alu -15 297 10 240 59 0 0 chr5 189158881 189158915 -13926617 + (A)n Simple_repeat Simple_repeat 1 34 0 719 288 30 0 chr5 189158968 189159166 -13926366 + MIR SINE MIR 27 230 -32 335 68 0 0 chr5 189159242 189159286 -13926246 + MADE1 DNA Mariner 37 80 0 216 289 105 13 chr5 189159504 189159580 -13925952 - L2 LINE L2 -22 3250 3168 673 275 24 38 chr5 189160509 189160655 -13924877 + MIR SINE MIR 8 152 -110 2333 98 3 22 chr5 189160655 189160971 -13924561 + AluSx SINE Alu 1 310 -2 673 275 24 38 chr5 189160971 189161035 -13924497 + MIR SINE MIR 152 215 -47 464 312 0 14 chr5 189161260 189161401 -13924131 + MIR SINE MIR 28 166 -96 494 307 244 13 chr5 189161608 189162107 -13923425 + L2 LINE L2 2710 3313 0 231 328 0 30 chr5 189163083 189163150 -13922382 - MIR SINE MIR -170 92 28 603 236 32 70 chr5 189163168 189163281 -13922251 + MER113 DNA MER1_type? 3 119 -402 2208 94 7 19 chr5 189163281 189163590 -13921942 - AluSx SINE Alu -7 305 1 603 236 32 70 chr5 189163590 189163789 -13921743 + MER113 DNA MER1_type? 119 303 -218 1803 144 53 3 chr5 189163823 189164107 -13921425 - AluJb SINE Alu -14 298 1 384 331 79 22 chr5 189164635 189164813 -13920719 - MIR SINE MIR -30 232 45 535 288 81 46 chr5 189164838 189165123 -13920409 - L2 LINE L2 -6 3307 3013 333 145 14 58 chr5 189165150 189165219 -13920313 + MLT1J LTR MaLR 110 175 -336 493 247 82 24 chr5 189165287 189165457 -13920075 + MLT1J2 LTR MaLR 269 448 -2 2041 150 37 11 chr5 189165926 189166300 -13919232 + MLT1B LTR MaLR 1 384 -6 204 354 16 24 chr5 189166320 189166447 -13919085 - L2 LINE L2 -1143 2171 2046 654 283 21 16 chr5 189166778 189166965 -13918567 + MER5A DNA MER1_type 2 189 0 338 216 136 0 chr5 189166987 189167075 -13918457 + L2 LINE L2 3171 3270 -2 230 314 65 16 chr5 189167999 189168123 -13917409 + MER5A DNA MER1_type 16 145 -44 275 291 11 44 chr5 189168359 189168541 -13916991 + (CAGAGA)n Simple_repeat Simple_repeat 2 177 0 411 190 265 27 chr5 189168849 189169013 -13916519 + MIR SINE MIR 7 200 -44 723 208 76 10 chr5 189169185 189169287 -13916245 + MER6B DNA MER2_type 1 95 -770 2279 124 3 0 chr5 189169287 189169593 -13915939 + AluSx SINE Alu 1 307 -5 723 208 76 10 chr5 189169593 189169687 -13915845 + MER6B DNA MER2_type 95 210 0 201 280 68 53 chr5 189169687 189169814 -13915718 - MIR SINE MIR -114 148 20 379 52 35 0 chr5 189170580 189170638 -13914894 + (CA)n Simple_repeat Simple_repeat 2 61 0 225 242 154 22 chr5 189170776 189170867 -13914665 + L2 LINE L2 3170 3272 0 428 280 125 31 chr5 189171081 189171343 -13914189 + MER102a DNA MER1_type 47 329 -1 509 228 62 43 chr5 189171345 189171507 -13914025 - MER112 DNA MER1_type 0 260 96 259 257 57 67 chr5 189172246 189172351 -13913181 - L2 LINE L2 0 3313 3210 382 247 161 32 chr5 189172372 189172558 -13912974 + MIR SINE MIR 49 258 -4 235 254 0 0 chr5 189172855 189172910 -13912622 + L2 LINE L2 3202 3256 -16 271 248 132 50 chr5 189172936 189173057 -13912475 + MIR SINE MIR 103 233 -29 1704 160 121 0 chr5 189173493 189173800 -13911732 + MER2 DNA MER2_type 1 344 0 1395 295 56 37 chr5 189174464 189175033 -13910499 + MLT1K LTR MaLR 4 583 -5 2447 57 30 7 chr5 189175227 189175527 -13910005 + AluY SINE Alu 1 307 -4 357 313 123 18 chr5 189175527 189175690 -13909842 + MIR SINE MIR 22 201 -61 879 160 0 0 chr5 189175751 189175882 -13909650 + FLAM_A SINE Alu 1 131 -2 280 305 155 56 chr5 189176208 189176421 -13909111 + MIR SINE MIR 29 262 0 663 212 10 108 chr5 189178171 189178300 -13907232 + MIR SINE MIR 29 132 -130 1862 144 0 25 chr5 189178300 189178585 -13906947 + AluJo SINE Alu 15 292 -20 663 212 10 108 chr5 189178585 189178658 -13906874 + MIR SINE MIR 132 211 -51 288 307 321 0 chr5 189178702 189178839 -13906693 - MIR SINE MIR -70 192 12 245 229 184 46 chr5 189179105 189179214 -13906318 + MIR SINE MIR 108 231 -31 822 126 0 17 chr5 189179363 189179482 -13906050 + FLAM_C SINE Alu 1 117 -16 2274 74 0 3 chr5 189179487 189179795 -13905737 - AluY SINE Alu 0 307 1 470 268 29 22 chr5 189179853 189179991 -13905541 + MIR SINE MIR 5 143 -119 2273 136 0 0 chr5 189180428 189180737 -13904795 + AluSx SINE Alu 1 309 -3 190 187 0 147 chr5 189180812 189180887 -13904645 + L2 LINE L2 3010 3073 -199 730 191 11 71 chr5 189181028 189181211 -13904321 - MER20 DNA MER1_type -44 175 4 280 324 0 50 chr5 189181275 189181414 -13904118 + MIR SINE MIR 59 190 -72 25 0 0 0 chr5 189181542 189181567 -13903965 + AT_rich Low_complexity Low_complexity 1 25 0 387 60 0 0 chr5 189182544 189182594 -13902938 + (TG)n Simple_repeat Simple_repeat 2 51 0 2166 108 0 0 chr5 189183059 189183338 -13902194 + AluY SINE Alu 1 279 -32 852 0 0 27 chr5 189183338 189183449 -13902083 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 429 299 80 40 chr5 189183691 189183892 -13901640 + MIR SINE MIR 22 230 -32 314 326 254 0 chr5 189183976 189184157 -13901375 - MIR SINE MIR -20 242 16 222 208 0 0 chr5 189185289 189185342 -13900190 + CT-rich Low_complexity Low_complexity 2 54 0 300 193 0 0 chr5 189185345 189185402 -13900130 - Alu SINE Alu 0 302 246 311 179 15 0 chr5 189185405 189185472 -13900060 + CT-rich Low_complexity Low_complexity 2 69 0 327 256 0 0 chr5 189185546 189185636 -13899896 + CT-rich Low_complexity Low_complexity 3 92 0 849 219 13 0 chr5 189185637 189185788 -13899744 - FRAM SINE Alu -13 153 1 435 230 40 72 chr5 189185822 189185974 -13899558 + MIR SINE MIR 115 261 -1 2056 54 4 0 chr5 189186023 189186281 -13899251 + L1PA13 LINE L1 5905 6163 0 223 333 20 0 chr5 189187242 189187344 -13898188 + MIR SINE MIR 47 150 -112 585 241 65 79 chr5 189187469 189187759 -13897773 + MER102a DNA MER1_type 38 323 -7 336 273 66 25 chr5 189187803 189187924 -13897608 + MIR SINE MIR 75 200 -62 365 311 0 83 chr5 189187989 189188062 -13897470 + MIR SINE MIR 84 161 -101 2377 89 3 0 chr5 189188062 189188364 -13897168 + AluY SINE Alu 9 311 0 365 311 0 83 chr5 189188364 189188483 -13897049 + MIR SINE MIR 161 260 -2 359 253 109 33 chr5 189188831 189189013 -13896519 + L1ME4a LINE L1 5726 5893 -228 2133 136 0 3 chr5 189189013 189189315 -13896217 + AluSx SINE Alu 1 301 -11 359 253 109 33 chr5 189189315 189189499 -13896033 + L1ME4a LINE L1 5893 6120 -1 2255 129 3 0 chr5 189190045 189190355 -13895177 - AluSx SINE Alu -1 311 1 334 151 0 0 chr5 189190924 189190977 -13894555 - MER6A DNA MER2_type -552 53 1 475 238 0 8 chr5 189191532 189191654 -13893878 - L1ME3A LINE L1 -9 6161 6041 2244 91 7 10 chr5 189191702 189191999 -13893533 - AluSx SINE Alu -16 296 1 5436 243 93 44 chr5 189192069 189193738 -13891794 - HAL1 LINE L1 0 2507 697 1717 156 37 24 chr5 189193738 189194033 -13891499 - AluJo SINE Alu -13 299 1 5436 243 93 44 chr5 189194033 189194642 -13890890 - HAL1 LINE L1 -1810 697 119 306 0 0 0 chr5 189194649 189194683 -13890849 + (TA)n Simple_repeat Simple_repeat 2 35 0 2389 94 3 0 chr5 189194756 189195065 -13890467 - AluY SINE Alu -1 310 1 724 195 49 0 chr5 189195067 189195190 -13890342 - FLAM_A SINE Alu -4 129 1 562 311 34 30 chr5 189195361 189195615 -13889917 + MIR SINE MIR 1 256 -6 871 274 8 16 chr5 189196161 189196416 -13889116 - MIR SINE MIR 0 262 10 967 212 79 0 chr5 189196492 189196695 -13888837 + MER20 DNA MER1_type 1 219 0 455 187 13 0 chr5 189196733 189196808 -13888724 + tRNA-Lys-AAG tRNA tRNA 1 76 0 210 37 0 0 chr5 189196825 189196852 -13888680 + (A)n Simple_repeat Simple_repeat 1 27 0 5050 73 50 17 chr5 189197001 189197756 -13887776 - SVA Other Other -606 780 1 228 35 0 0 chr5 189197759 189197788 -13887744 + (GGGAGA)n Simple_repeat Simple_repeat 5 33 0 473 278 82 25 chr5 189197795 189197812 -13887720 - L1ME LINE L1 -4892 1650 1635 1920 156 24 0 chr5 189197812 189198101 -13887431 - AluSx SINE Alu -16 296 1 473 278 82 25 chr5 189198101 189198436 -13887096 - L1ME LINE L1 -4907 1635 1278 16515 115 41 53 chr5 189198493 189199021 -13886511 + Tigger3(Golem) DNA MER2_type 1 534 -2495 820 172 0 0 chr5 189199021 189199149 -13886383 + FLAM_C SINE Alu 5 132 -1 16515 115 41 53 chr5 189199149 189199278 -13886254 + Tigger3(Golem) DNA MER2_type 534 663 -2366 2313 108 0 0 chr5 189199278 189199574 -13885958 + AluSx SINE Alu 1 296 -16 16515 115 41 53 chr5 189199574 189200798 -13884734 + Tigger3(Golem) DNA MER2_type 663 1900 -1129 2276 111 56 17 chr5 189200798 189201158 -13884374 - THE1C LTR MaLR 0 375 2 16515 115 41 53 chr5 189201158 189201284 -13884248 + Tigger3(Golem) DNA MER2_type 1900 2026 -1003 446 108 40 0 chr5 189201284 189201358 -13884174 - L1PA13 LINE L1 0 6163 6087 16515 115 41 53 chr5 189201358 189202411 -13883121 + Tigger3(Golem) DNA MER2_type 2026 3029 0 387 316 55 51 chr5 189202439 189202567 -13882965 - L1ME LINE L1 -5288 1346 1220 2336 145 67 12 chr5 189202567 189202973 -13882559 - MSTA LTR MaLR 0 428 1 387 316 55 51 chr5 189202973 189202998 -13882534 - L1ME LINE L1 -5414 1220 1197 709 217 0 0 chr5 189202998 189203113 -13882419 - FLAM_A SINE Alu -18 115 1 387 316 55 51 chr5 189203113 189203211 -13882321 - L1ME LINE L1 -5437 1197 1093 267 319 31 49 chr5 189203419 189203582 -13881950 - L1ME LINE L1 -5591 1043 884 446 275 23 23 chr5 189203650 189203821 -13881711 - L1ME LINE L1 -5887 747 577 404 294 33 2 chr5 189203932 189204060 -13881472 + MIR SINE MIR 3 136 -72 249 159 0 0 chr5 189204063 189204107 -13881425 + T-rich Low_complexity Low_complexity 1 44 0 195 225 175 38 chr5 189204107 189204187 -13881345 + MIR SINE MIR 172 262 0 1987 148 0 10 chr5 189204673 189204970 -13880562 - AluJb SINE Alu -18 294 1 1309 160 98 33 chr5 189204976 189205283 -13880249 - L1MB5 LINE L1 0 6174 5848 1005 159 0 6 chr5 189205578 189205735 -13879797 + AluJb SINE Alu 123 278 -34 423 0 0 0 chr5 189205735 189205782 -13879750 + (CA)n Simple_repeat Simple_repeat 2 48 0 2408 101 3 0 chr5 189206121 189206429 -13879103 - AluSq SINE Alu -4 309 1 25 0 0 0 chr5 189206815 189206840 -13878692 + AT_rich Low_complexity Low_complexity 1 25 0 1286 174 100 0 chr5 189207195 189207465 -13878067 - L1MB5 LINE L1 0 6174 5878 303 167 73 125 chr5 189208395 189208468 -13877064 + MIR3 SINE MIR 82 150 -58 1749 199 61 50 chr5 189208468 189208930 -13876602 + MLT1C LTR MaLR 1 467 0 303 167 73 125 chr5 189208930 189208952 -13876580 + MIR3 SINE MIR 150 172 -36 2307 103 3 0 chr5 189209025 189209325 -13876207 - AluSq SINE Alu -12 301 1 194 239 43 0 chr5 189209439 189209485 -13876047 - MIR SINE MIR -103 105 58 437 296 113 11 chr5 189209764 189209950 -13875582 + MIR SINE MIR 2 206 -56 188 333 35 0 chr5 189210139 189210196 -13875336 - L2 LINE L2 -9 3263 3205 * 218 369 0 12 chr5 189210178 189210262 -13875270 + MIR SINE MIR 6 88 -174 1711 153 51 4 chr5 189210683 189210958 -13874574 - AluJo SINE Alu -14 298 11 1890 166 30 0 chr5 189211023 189211325 -13874207 + AluJb SINE Alu 1 311 -1 672 282 27 80 chr5 189211694 189212095 -13873437 + MLT1K LTR MaLR 201 580 -8 409 150 0 0 chr5 189212282 189212342 -13873190 - AluJ/FLAM SINE Alu -251 61 2 22 0 0 0 chr5 189212343 189212365 -13873167 + AT_rich Low_complexity Low_complexity 1 22 0 249 171 0 0 chr5 189212403 189212444 -13873088 + Alu SINE Alu 1 41 -262 2300 115 0 0 chr5 189213012 189213317 -13872215 + AluSq SINE Alu 1 305 -8 1312 158 9 18 chr5 189213483 189213704 -13871828 - MER20 DNA MER1_type 0 219 1 632 298 103 23 chr5 189214372 189214674 -13870858 + L2 LINE L2 2983 3308 -5 180 176 0 0 chr5 189215888 189215922 -13869610 + (CAA)n Simple_repeat Simple_repeat 2 35 0 324 348 138 18 chr5 189216906 189217239 -13868293 + L2 LINE L2 2818 3190 -82 727 282 39 20 chr5 189217250 189217505 -13868027 + MIR SINE MIR 2 261 -1 964 199 0 0 chr5 189217522 189217688 -13867844 + FRAM SINE Alu 1 166 -10 181 157 0 39 chr5 189217764 189217815 -13867717 + CT-rich Low_complexity Low_complexity 2 50 0 228 348 80 9 chr5 189218366 189218478 -13867054 + MIR SINE MIR 20 139 -123 21 0 0 0 chr5 189219527 189219548 -13865984 + AT_rich Low_complexity Low_complexity 1 21 0 206 300 0 0 chr5 189220088 189220138 -13865394 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 193 364 0 0 chr5 189220187 189220253 -13865279 - L2 LINE L2 -54 3259 3194 811 268 83 0 chr5 189220265 189220519 -13865013 + Charlie8 DNA MER1_type 2 276 -2141 210 298 60 12 chr5 189220677 189220761 -13864771 - L2 LINE L2 -194 3078 2991 356 220 119 0 chr5 189221170 189221290 -13864242 + L1MC4 LINE L1 7906 7995 0 21 0 0 0 chr5 189221449 189221470 -13864062 + AT_rich Low_complexity Low_complexity 1 21 0 240 204 112 82 chr5 189221591 189221689 -13863843 - MER5A DNA MER1_type -80 109 9 742 221 45 0 chr5 189221883 189222037 -13863495 - FRAM SINE Alu -15 161 1 1202 134 86 0 chr5 189222090 189222276 -13863256 - AluSg/x SINE Alu -28 282 81 604 249 55 55 chr5 189222328 189222388 -13863144 - MIR SINE MIR -46 216 157 1832 232 81 24 chr5 189222388 189222897 -13862635 + MLT1F LTR MaLR 5 542 0 604 249 55 55 chr5 189222897 189223037 -13862495 - MIR SINE MIR -104 158 16 230 257 43 43 chr5 189223658 189223728 -13861804 - MIR SINE MIR -23 239 170 353 270 0 0 chr5 189224025 189224099 -13861433 + L2 LINE L2 3195 3268 -4 229 165 94 82 chr5 189224144 189224229 -13861303 + MER91A DNA MER1_type 111 196 0 338 266 86 16 chr5 189224977 189225176 -13860356 + Charlie8 DNA MER1_type 75 232 -2185 1984 164 7 0 chr5 189225758 189226063 -13859469 - AluJb SINE Alu -5 307 1 311 262 0 90 chr5 189226262 189226384 -13859148 + L2 LINE L2 2945 3055 -217 1101 255 50 31 chr5 189226725 189227148 -13858384 - L1MC4 LINE L1 0 8042 7612 315 219 0 0 chr5 189227395 189227459 -13858073 + MER113 DNA MER1_type? 458 521 0 474 311 30 0 chr5 189227459 189227591 -13857941 - MIR SINE MIR -80 182 47 812 173 249 0 chr5 189227593 189227778 -13857754 + MER46A DNA MER2_type 1 231 -5 2277 109 3 3 chr5 189227779 189228081 -13857451 - AluSx SINE Alu -10 302 1 753 255 86 23 chr5 189228144 189228380 -13857152 - MIR SINE MIR -12 250 4 368 161 108 75 chr5 189228770 189228863 -13856669 + MIR SINE MIR 117 212 -50 584 221 0 64 chr5 189228868 189229008 -13856524 + FLAM_A SINE Alu 2 132 -1 406 224 0 28 chr5 189229192 189229371 -13856161 + (TCCA)n Simple_repeat Simple_repeat 2 175 0 283 207 0 23 chr5 189229397 189229484 -13856048 + (TCCA)n Simple_repeat Simple_repeat 2 86 0 317 324 54 0 chr5 189229495 189229606 -13855926 - L2 LINE L2 -5 3267 3151 232 196 116 45 chr5 189229950 189230062 -13855470 + L3 LINE CR1 1391 1510 -67 299 280 97 0 chr5 189230444 189230537 -13854995 + MIR SINE MIR 44 145 -63 878 154 37 37 chr5 189230562 189230724 -13854808 - FRAM SINE Alu -4 162 1 2253 124 0 0 chr5 189230732 189231038 -13854494 - AluSx SINE Alu -6 306 1 233 338 184 0 chr5 189231292 189231428 -13854104 - MIR SINE MIR -96 166 6 343 120 0 80 chr5 189231602 189231688 -13853844 + AluSg SINE Alu 1 44 -259 2025 70 0 4 chr5 189231728 189231995 -13853537 + AluSg SINE Alu 38 303 0 1769 190 3 0 chr5 189232352 189232647 -13852885 - AluJo SINE Alu -16 296 1 411 322 16 55 chr5 189232663 189232846 -13852686 - MIR SINE MIR 0 262 87 225 225 70 42 chr5 189233072 189233143 -13852389 + MIR SINE MIR 8 80 -182 306 255 165 98 chr5 189233273 189233528 -13852004 + MER102b DNA MER1_type 61 332 -9 1842 153 13 17 chr5 189234163 189234464 -13851068 + AluJb SINE Alu 5 304 -8 270 221 116 12 chr5 189234572 189234658 -13850874 + L2 LINE L2 3176 3270 -2 290 229 53 114 chr5 189235156 189235287 -13850245 - MIR SINE MIR -48 214 92 880 223 22 5 chr5 189235667 189235851 -13849681 - MER5A DNA MER1_type -2 187 1 40 37 0 0 chr5 189236206 189236260 -13849272 + AT_rich Low_complexity Low_complexity 1 54 0 2273 119 0 13 chr5 189236372 189236683 -13848849 + AluSx SINE Alu 1 307 -5 203 194 0 0 chr5 189237594 189237630 -13847902 - L2 LINE L2 -9 3304 3269 198 0 0 0 chr5 189237760 189237782 -13847750 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1843 147 8 0 chr5 189237792 189238058 -13847474 - AluSq SINE Alu -45 268 1 188 279 0 66 chr5 189238084 189238145 -13847387 - L2 LINE L2 -11 3261 3205 * 491 272 0 74 chr5 189238130 189238230 -13847302 + MER5B DNA MER1_type 29 114 -64 2205 124 7 0 chr5 189238230 189238537 -13846995 - AluSx SINE Alu -3 309 1 491 272 0 74 chr5 189238537 189238598 -13846934 + MER5B DNA MER1_type 114 178 0 251 308 88 0 chr5 189238668 189238759 -13846773 + L2 LINE L2 3215 3313 0 306 282 137 38 chr5 189239298 189239429 -13846103 + MIR3 SINE MIR 15 158 -50 467 194 120 0 chr5 189239430 189239538 -13845994 + FLAM_A SINE Alu 7 127 -15 243 227 15 45 chr5 189239558 189239624 -13845908 - MER5A DNA MER1_type -1 188 125 1129 178 17 9 chr5 189239626 189239857 -13845675 + L1MB3 LINE L1 5749 5981 -202 309 303 56 14 chr5 189240682 189240824 -13844708 - MIR SINE MIR -6 256 109 322 248 20 30 chr5 189240909 189241010 -13844522 + MIR SINE MIR 92 191 -71 592 224 170 7 chr5 189242362 189242509 -13843023 - MER5A DNA MER1_type 0 189 19 1760 102 8 16 chr5 189243413 189243659 -13841873 - AluSg/x SINE Alu 0 312 69 201 121 0 0 chr5 189245641 189245674 -13839858 + (TC)n Simple_repeat Simple_repeat 2 34 0 577 289 79 61 chr5 189246337 189246565 -13838967 - L2 LINE L2 -1 3271 3040 213 94 0 0 chr5 189247866 189247898 -13837634 + (TC)n Simple_repeat Simple_repeat 1 32 0 2245 135 0 0 chr5 189247898 189248209 -13837323 - AluSx SINE Alu -1 311 1 544 240 40 20 chr5 189248636 189248786 -13836746 + MER103 DNA DNA 1 153 -13 368 314 68 37 chr5 189249017 189249208 -13836324 + L2 LINE L2 3039 3235 -37 279 284 39 5 chr5 189250206 189250365 -13835167 + MIR SINE MIR 8 243 -19 2091 182 38 11 chr5 189251491 189251941 -13833591 + MLT1C LTR MaLR 1 462 -5 491 255 127 6 chr5 189252982 189253139 -13832393 + MIR SINE MIR 84 259 -3 371 278 84 12 chr5 189253238 189253376 -13832156 + MIR SINE MIR 20 172 -52 2326 119 37 6 chr5 189253491 189253844 -13831688 + THE1B LTR MaLR 1 364 0 227 154 16 236 chr5 189254376 189254499 -13831033 + MIR SINE MIR 159 254 -8 314 317 29 0 chr5 189254607 189254711 -13830821 - MER5B DNA MER1_type -71 107 1 294 265 137 0 chr5 189254742 189254859 -13830673 - L2 LINE L2 -259 3054 2922 722 275 26 50 chr5 189255491 189255755 -13829777 - MIR SINE MIR -7 255 1 294 271 131 25 chr5 189255815 189255937 -13829595 + MIR SINE MIR 80 214 -48 360 0 0 0 chr5 189255966 189256006 -13829526 + (ATG)n Simple_repeat Simple_repeat 1 40 0 477 0 0 0 chr5 189256517 189256570 -13828962 + (TG)n Simple_repeat Simple_repeat 2 54 0 2237 122 15 18 chr5 189256608 189256943 -13828589 + MER1B DNA MER1_type 1 334 -3 2276 104 23 0 chr5 189256962 189257261 -13828271 + AluSc SINE Alu 1 306 -3 638 217 145 42 chr5 189257333 189257499 -13828033 + MER5A DNA MER1_type 7 189 0 282 317 90 28 chr5 189257594 189257739 -13827793 - MIR SINE MIR 0 262 109 553 324 27 18 chr5 189257751 189257970 -13827562 + MIR SINE MIR 13 233 -29 518 281 132 28 chr5 189258200 189258418 -13827114 - MIR SINE MIR -15 247 11 471 314 76 18 chr5 189259097 189259320 -13826212 + MIR SINE MIR 20 255 -7 482 289 0 9 chr5 189260953 189261067 -13824465 + MER81 DNA DNA 2 114 0 2251 124 10 0 chr5 189261084 189261390 -13824142 - AluSx SINE Alu -1 311 3 624 203 22 14 chr5 189261397 189261535 -13823997 + MER5B DNA MER1_type 37 175 -3 348 308 96 8 chr5 189261782 189262042 -13823490 + L1ME LINE L1 5381 5663 -458 282 281 18 18 chr5 189262201 189262315 -13823217 + MIR SINE MIR 117 230 -32 867 153 0 29 chr5 189262478 189262615 -13822917 + FLAM_C SINE Alu 1 133 0 235 276 52 52 chr5 189263514 189263706 -13821826 + Charlie7 DNA MER1_type 2421 2612 0 422 299 31 0 chr5 189263715 189263842 -13821690 + MIR SINE MIR 19 149 -59 273 330 174 24 chr5 189263860 189264072 -13821460 + MIR SINE MIR 9 252 -10 251 357 0 0 chr5 189264621 189264691 -13820841 + MIR SINE MIR 79 148 -60 619 285 101 18 chr5 189264734 189264962 -13820570 + MIR SINE MIR 14 260 -2 706 217 83 2 chr5 189265738 189265900 -13819632 - MER5A DNA MER1_type 0 189 7 1469 111 0 0 chr5 189266409 189266599 -13818933 + AluSq SINE Alu 113 302 -11 382 241 45 14 chr5 189267103 189267218 -13818314 + MIR SINE MIR 16 132 -76 918 279 75 34 chr5 189267410 189267661 -13817871 + MLT1K LTR MaLR 155 394 -194 2068 143 10 0 chr5 189267661 189267968 -13817564 - AluSx SINE Alu -2 310 1 1930 119 0 32 chr5 189267974 189268251 -13817281 - AluSc SINE Alu -21 288 21 918 279 75 34 chr5 189268251 189268376 -13817156 + MLT1K LTR MaLR 398 554 -34 205 273 76 15 chr5 189268838 189268904 -13816628 + MIR3 SINE MIR 3 72 -136 221 324 21 65 chr5 189268927 189269117 -13816415 + L2 LINE L2 2839 3022 -291 762 315 32 16 chr5 189269121 189269372 -13816160 + MIR SINE MIR 8 262 0 431 333 66 70 chr5 189269373 189269616 -13815916 + L2 LINE L2 3029 3270 -2 208 308 17 51 chr5 189269621 189269659 -13815873 + MIR3 SINE MIR 87 125 -83 2415 88 0 0 chr5 189269659 189269956 -13815576 - AluY SINE Alu -14 297 1 208 308 17 51 chr5 189269956 189270034 -13815498 + MIR3 SINE MIR 125 199 -9 546 299 61 23 chr5 189270054 189270268 -13815264 + L3 LINE CR1 1293 1514 -63 468 35 0 0 chr5 189270667 189270725 -13814807 + (CA)n Simple_repeat Simple_repeat 1 58 0 258 32 0 0 chr5 189270726 189270757 -13814775 + (TC)n Simple_repeat Simple_repeat 2 32 0 1993 157 0 7 chr5 189271047 189271346 -13814186 - AluSx SINE Alu -15 297 1 280 338 84 16 chr5 189271465 189271776 -13813756 - L1ME4a LINE L1 -198 5923 5592 199 279 29 44 chr5 189271812 189271880 -13813652 + L3 LINE CR1 1509 1575 -2 2093 134 0 7 chr5 189271906 189272204 -13813328 - AluJb SINE Alu -10 302 7 391 300 44 25 chr5 189272915 189273075 -13812457 + MIR SINE MIR 29 191 -71 516 230 36 29 chr5 189273345 189273484 -13812048 - MIR SINE MIR 0 262 123 447 223 134 108 chr5 189273508 189273813 -13811719 - MER102b DNA MER1_type -28 313 1 328 247 149 11 chr5 189273955 189274103 -13811429 - MIR SINE MIR -63 145 15 285 328 0 0 chr5 189275081 189275255 -13810277 + (CCCA)n Simple_repeat Simple_repeat 2 175 0 235 227 11 11 chr5 189275301 189275389 -13810143 + (CCCA)n Simple_repeat Simple_repeat 1 88 0 256 324 10 0 chr5 189275403 189275505 -13810027 + (TTCA)n Simple_repeat Simple_repeat 3 105 0 769 206 24 35 chr5 189275734 189275904 -13809628 - MER5B DNA MER1_type -10 168 1 1133 181 43 5 chr5 189275912 189276122 -13809410 + MER20 DNA MER1_type 1 218 -1 482 300 79 39 chr5 189276524 189276804 -13808728 + L2 LINE L2 3022 3312 -1 429 224 200 42 chr5 189276806 189276971 -13808561 - MIR SINE MIR -69 193 3 183 255 69 103 chr5 189277370 189277515 -13808017 + L2 LINE L2 2709 2848 -466 683 189 176 7 chr5 189277607 189277760 -13807772 - MER5A DNA MER1_type -2 187 9 264 339 39 62 chr5 189278053 189278183 -13807349 - L2 LINE L2 -23 3249 3123 287 287 131 49 chr5 189278214 189278336 -13807196 - L2 LINE L2 0 3272 3141 527 99 22 0 chr5 189278336 189278427 -13807105 + (GGGA)n Simple_repeat Simple_repeat 1 93 0 2100 127 10 23 chr5 189278554 189278679 -13806853 + AluSx SINE Alu 1 126 -186 209 29 0 57 chr5 189278679 189278714 -13806818 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2100 127 10 23 chr5 189278714 189278896 -13806636 + AluSx SINE Alu 126 304 -8 2177 134 3 3 chr5 189278902 189279208 -13806324 + AluSx SINE Alu 1 306 -6 4753 209 21 18 chr5 189279934 189280142 -13805390 + L1M2 LINE L1 1355 1561 -5288 216 0 0 0 chr5 189280142 189280166 -13805366 + (TA)n Simple_repeat Simple_repeat 2 25 0 4753 209 21 18 chr5 189280166 189280505 -13805027 + L1M2 LINE L1 1561 1898 -4951 1831 183 10 0 chr5 189280505 189280811 -13804721 + AluJb SINE Alu 3 311 -1 4753 209 21 18 chr5 189280811 189281463 -13804069 + L1M2 LINE L1 1898 2558 -4291 10425 123 28 7 chr5 189281645 189282465 -13803067 - Tigger1 DNA MER2_type -744 1674 873 2121 104 0 0 chr5 189282465 189282770 -13802762 - AluY SINE Alu 0 305 1 10425 123 28 7 chr5 189282770 189283585 -13801947 - Tigger1 DNA MER2_type -1545 873 4 1326 122 0 25 chr5 189283715 189283911 -13801621 - AluSc SINE Alu -98 211 21 311 262 41 33 chr5 189283914 189284036 -13801496 + MLT1K LTR MaLR 432 554 -34 310 407 25 0 chr5 189284211 189284329 -13801203 + L2 LINE L2 3152 3272 0 590 249 0 73 chr5 189285921 189286086 -13799446 + MER91B DNA MER1_type 1 153 -37 438 289 0 0 chr5 189286093 189286197 -13799335 + MER91B DNA MER1_type 87 190 0 499 357 114 6 chr5 189286768 189287110 -13798422 + L2 LINE L2 2930 3308 -5 474 286 47 23 chr5 189287159 189287330 -13798202 - MIR SINE MIR -19 243 69 273 231 26 26 chr5 189287352 189287430 -13798102 + MIR SINE MIR 28 105 -157 660 291 146 42 chr5 189287615 189288048 -13797484 - L2 LINE L2 0 3313 2836 267 295 13 0 chr5 189288525 189288603 -13796929 + (TG)n Simple_repeat Simple_repeat 2 80 0 197 33 33 0 chr5 189288724 189288754 -13796778 + (TG)n Simple_repeat Simple_repeat 1 31 0 3078 117 57 23 chr5 189289334 189289863 -13795669 + L1MA4 LINE L1 5752 6298 -2 591 298 44 19 chr5 189290128 189290333 -13795199 - MIR SINE MIR -15 247 38 660 113 0 21 chr5 189290479 189290635 -13794897 - AluSp/q SINE Alu 0 344 191 1523 148 41 11 chr5 189290769 189292212 -13793320 + L1PA8 LINE L1 4545 6172 0 2393 128 22 3 chr5 189292212 189292580 -13792952 + L1PB4 LINE L1 5769 6143 -13 688 159 8 8 chr5 189292587 189292713 -13792819 - MLT2C2 LTR ERVL -336 128 3 185 337 134 21 chr5 189292728 189292915 -13792617 + L2 LINE L2 2829 3036 -236 499 174 11 0 chr5 189292975 189293067 -13792465 - L1 LINE L1 -3433 2713 2621 284 270 135 0 chr5 189293144 189293233 -13792299 + L2 LINE L2 3155 3255 -17 684 308 20 10 chr5 189293813 189294011 -13791521 + MIR SINE MIR 31 230 -32 432 123 0 0 chr5 189294036 189294109 -13791423 + (CA)n Simple_repeat Simple_repeat 2 74 0 238 335 163 37 chr5 189294181 189294426 -13791106 + L2 LINE L2 2686 2961 -353 348 275 92 0 chr5 189294499 189294608 -13790924 + L2 LINE L2 3136 3254 -18 698 300 35 18 chr5 189295230 189295457 -13790075 + MIR SINE MIR 28 258 -4 211 200 0 0 chr5 189295858 189295893 -13789639 + (CA)n Simple_repeat Simple_repeat 1 35 0 6372 186 56 30 chr5 189296493 189297059 -13788473 + Charlie1a DNA MER1_type 2 552 -2209 2510 70 0 0 chr5 189297059 189297360 -13788172 + AluY SINE Alu 1 301 -10 6372 186 56 30 chr5 189297360 189297813 -13787719 + Charlie1a DNA MER1_type 552 992 -1769 1957 96 30 96 chr5 189297813 189298148 -13787384 - AluSp SINE Alu 0 313 1 6372 186 56 30 chr5 189298148 189298544 -13786988 + Charlie1a DNA MER1_type 992 1455 0 2475 64 0 29 chr5 189299593 189299907 -13785625 + AluY SINE Alu 3 307 -4 421 322 48 88 chr5 189299922 189300149 -13785383 - L2 LINE L2 -26 3246 3029 762 315 32 16 chr5 189300150 189300401 -13785131 - MIR SINE MIR 0 262 8 221 324 21 65 chr5 189300405 189300595 -13784937 - L2 LINE L2 -291 3022 2839 205 273 76 15 chr5 189300618 189300684 -13784848 - MIR3 SINE MIR -136 72 3 750 286 41 38 chr5 189301144 189301269 -13784263 - MLT1K LTR MaLR -34 554 431 1930 119 0 32 chr5 189301269 189301546 -13783986 + AluSc SINE Alu 21 288 -21 2068 143 10 0 chr5 189301552 189301859 -13783673 + AluSx SINE Alu 1 310 -2 750 286 41 38 chr5 189301859 189302065 -13783467 - MLT1K LTR MaLR -161 427 215 2368 96 0 6 chr5 189303344 189303657 -13781875 - AluY SINE Alu 0 311 1 423 311 37 24 chr5 189303760 189303924 -13781608 - MIR SINE MIR -56 206 41 421 308 69 48 chr5 189303951 189304286 -13781246 + Charlie8 DNA MER1_type 125 466 -1951 1642 142 42 26 chr5 189304782 189305092 -13780440 + MER46B DNA MER2_type 45 234 -2 * 2861 221 9 28 chr5 189305092 189305744 -13779788 + MER82 DNA MER2_type 13 652 -1 374 344 47 5 chr5 189305935 189306145 -13779387 + MIR SINE MIR 25 242 -20 477 281 64 56 chr5 189307388 189307637 -13777895 - MIR SINE MIR -7 255 5 23 0 0 0 chr5 189307644 189307667 -13777865 + AT_rich Low_complexity Low_complexity 1 23 0 1630 139 0 101 chr5 189307667 189307983 -13777549 - AluJo SINE Alu -18 294 11 378 227 42 59 chr5 189308144 189308263 -13777269 + L2 LINE L2 3197 3313 0 203 366 69 30 chr5 189309648 189309779 -13775753 + L2 LINE L2 3137 3272 0 243 293 0 40 chr5 189309966 189310041 -13775491 + MIR SINE MIR 117 188 -74 480 242 94 0 chr5 189310181 189310309 -13775223 - MIR SINE MIR -12 250 111 580 189 175 7 chr5 189312944 189313087 -13772445 + MIR SINE MIR 86 252 -10 344 340 82 0 chr5 189315738 189315885 -13769647 + MIR3 SINE MIR 39 197 -11 227 250 0 0 chr5 189316718 189316762 -13768770 - MIR SINE MIR -132 76 33 294 289 53 27 chr5 189317321 189317475 -13768057 + MIR SINE MIR 36 148 -60 225 0 0 0 chr5 189318493 189318518 -13767014 + (TG)n Simple_repeat Simple_repeat 2 26 0 200 289 0 0 chr5 189319252 189319297 -13766235 + L2 LINE L2 3251 3295 -18 218 227 23 0 chr5 189319381 189319425 -13766107 + L2 LINE L2 3251 3295 -18 752 308 51 0 chr5 189319764 189319998 -13765534 + MIR SINE MIR 1 246 -16 467 312 127 35 chr5 189320900 189320962 -13764570 + L2 LINE L2 2829 2884 -429 2407 77 3 3 chr5 189320962 189321260 -13764272 - AluSx SINE Alu -14 298 1 467 312 127 35 chr5 189321260 189321591 -13763941 + L2 LINE L2 2884 3258 -55 198 280 98 61 chr5 189322333 189322465 -13763067 - MIR SINE MIR -44 218 82 378 0 0 0 chr5 189322988 189323030 -13762502 + (CA)n Simple_repeat Simple_repeat 2 43 0 564 204 99 80 chr5 189323055 189323256 -13762276 + MER102a DNA MER1_type 124 328 -2 422 262 198 0 chr5 189324114 189324286 -13761246 - MIR SINE MIR -46 216 11 388 338 20 30 chr5 189324978 189325176 -13760356 - MIR SINE MIR -59 203 8 717 237 143 31 chr5 189327741 189327965 -13757567 + MIR SINE MIR 14 262 0 306 281 256 52 chr5 189328686 189329092 -13756440 + L3 LINE CR1 1079 1567 -10 267 31 0 0 chr5 189330797 189330829 -13754703 + (CA)n Simple_repeat Simple_repeat 2 33 0 182 294 43 54 chr5 189330904 189330996 -13754536 + MIR SINE MIR 50 140 -68 183 162 0 0 chr5 189331056 189331093 -13754439 + (CA)n Simple_repeat Simple_repeat 1 37 0 441 271 116 101 chr5 189333325 189333713 -13751819 + L2 LINE L2 2920 3313 0 384 303 73 0 chr5 189333796 189333905 -13751627 + L2 LINE L2 3197 3313 0 440 250 20 10 chr5 189334391 189334491 -13751041 + MIR SINE MIR 3 103 -159 409 261 0 36 chr5 189334519 189334630 -13750902 - L2 LINE L2 -12 3301 3195 382 267 118 30 chr5 189334629 189334764 -13750768 + MIR SINE MIR 116 262 0 * 182 363 44 0 chr5 189334812 189334903 -13750629 - MIR SINE MIR -109 153 59 844 98 0 0 chr5 189337427 189337539 -13747993 + HY1 scRNA scRNA 1 112 0 1932 139 3 57 chr5 189337539 189337927 -13747605 - L1MA8 LINE L1 -20 6271 5905 250 283 72 58 chr5 189337933 189338071 -13747461 - MIR3 SINE MIR -53 155 16 334 261 23 0 chr5 189338264 189338352 -13747180 - MER5A DNA MER1_type -74 115 26 248 220 0 0 chr5 189338470 189338520 -13747012 - Charlie8 DNA MER1_type -1 2416 2367 2249 139 23 0 chr5 189338713 189339065 -13746467 + MER46B DNA MER2_type 1 235 -1 638 247 283 8 chr5 189340572 189341028 -13744504 + L2 LINE L2 2739 3313 0 503 288 58 0 chr5 189343633 189343772 -13741760 - MIR SINE MIR -58 204 58 1999 158 3 19 chr5 189344123 189344440 -13741092 - AluJo SINE Alu 0 312 1 760 286 33 37 chr5 189344682 189344927 -13740605 - MIR SINE MIR -17 245 2 180 0 0 0 chr5 189345600 189345620 -13739912 + (TGG)n Simple_repeat Simple_repeat 1 20 0 849 259 53 29 chr5 189345637 189345880 -13739652 - MIR SINE MIR -12 250 2 2252 98 3 7 chr5 189346216 189346525 -13739007 + AluSq SINE Alu 1 308 0 433 295 98 26 chr5 189346857 189347050 -13738482 - MIR SINE MIR -46 216 10 560 319 86 17 chr5 189348692 189348924 -13736608 - MIR SINE MIR -2 260 13 303 318 0 24 chr5 189349329 189349414 -13736118 - L3 LINE CR1 -452 1125 1043 205 222 0 71 chr5 189349805 189349904 -13735628 + GA-rich Low_complexity Low_complexity 5 96 0 2359 102 3 10 chr5 189349940 189350254 -13735278 + AluSq SINE Alu 1 312 -1 761 245 116 0 chr5 189350713 189350947 -13734585 + L2 LINE L2 2751 3008 -305 273 119 0 0 chr5 189351224 189351266 -13734266 + (GGA)n Simple_repeat Simple_repeat 1 42 0 576 329 31 18 chr5 189351737 189351959 -13733573 - MIR SINE MIR -7 255 31 564 266 87 29 chr5 189351959 189352166 -13733366 - MER58A DNA MER1_type -2 222 4 593 303 111 21 chr5 189354249 189354483 -13731049 + MIR SINE MIR 8 262 0 317 281 25 58 chr5 189354489 189354610 -13730922 + MIR3 SINE MIR 62 178 -30 377 355 8 0 chr5 189355542 189355663 -13729869 + L2 LINE L2 3190 3311 -2 186 253 121 24 chr5 189357067 189357150 -13728382 - MIR SINE MIR -78 130 40 * 739 242 31 26 chr5 189357148 189357342 -13728190 - MIR SINE MIR 0 262 68 4934 153 33 2 chr5 189357574 189358417 -13727115 + L1MA6 LINE L1 5432 6300 0 2083 124 10 0 chr5 189359168 189359474 -13726058 - AluSq SINE Alu -4 309 1 728 250 118 19 chr5 189359685 189359897 -13725635 - MIR SINE MIR -1 261 29 770 268 57 9 chr5 189363310 189363538 -13721994 + MIR SINE MIR 22 260 -2 544 261 221 5 chr5 189364669 189364868 -13720664 - MIR SINE MIR -1 261 20 966 162 27 5 chr5 189364960 189365145 -13720387 - MER5A DNA MER1_type 0 189 1 182 284 102 23 chr5 189366603 189366691 -13718841 - MIR SINE MIR -48 214 120 331 330 10 0 chr5 189366721 189366824 -13718708 - MIR SINE MIR -111 151 48 1883 98 47 7 chr5 189366945 189367222 -13718310 - AluSq SINE Alu -20 293 6 425 287 35 21 chr5 189367933 189368076 -13717456 + MIR SINE MIR 51 195 -67 282 224 53 26 chr5 189368399 189368475 -13717057 - L2 LINE L2 -17 3296 3219 628 261 85 0 chr5 189369448 189369613 -13715919 + MIR SINE MIR 14 192 -70 345 260 7 107 chr5 189369622 189369694 -13715838 - MIR SINE MIR -1 261 210 2044 117 0 7 chr5 189369694 189369994 -13715538 - AluSx SINE Alu -14 298 1 345 260 7 107 chr5 189369994 189370071 -13715461 - MIR SINE MIR -52 210 127 1034 210 56 113 chr5 189370128 189370595 -13714937 - MLT1D LTR MaLR -2 503 64 432 235 176 7 chr5 189371545 189371698 -13713834 - MIR SINE MIR -13 249 71 276 269 86 11 chr5 189373337 189373430 -13712102 + L2 LINE L2 3166 3265 -7 761 248 102 43 chr5 189373520 189373842 -13711690 - MER102b DNA MER1_type 0 341 1 516 315 38 22 chr5 189374668 189374852 -13710680 + MIR3 SINE MIR 16 202 -6 2036 107 20 3 chr5 189375360 189375658 -13709874 + AluSx SINE Alu 1 303 -9 518 294 37 67 chr5 189375773 189375859 -13709673 - MER102b DNA MER1_type -51 290 203 1028 223 10 0 chr5 189375859 189376065 -13709467 - MER3 DNA MER1_type -1 208 1 518 294 37 67 chr5 189376065 189376277 -13709255 - MER102b DNA MER1_type -138 203 1 2183 97 0 7 chr5 189376460 189376759 -13708773 + AluSx SINE Alu 2 298 -14 553 152 94 72 chr5 189376759 189376888 -13708644 - FLAM_C SINE Alu -175 137 3 21 0 0 0 chr5 189378285 189378306 -13707226 + AT_rich Low_complexity Low_complexity 1 21 0 181 295 162 0 chr5 189378695 189378800 -13706732 - MIR SINE MIR -17 245 124 23 0 0 0 chr5 189379086 189379109 -13706423 + AT_rich Low_complexity Low_complexity 1 23 0 408 281 28 56 chr5 189379109 189379287 -13706245 + MIR SINE MIR 17 189 -73 814 265 74 48 chr5 189380269 189380578 -13704954 - MER102b DNA MER1_type -24 317 1 201 288 100 25 chr5 189380759 189380839 -13704693 + MIR SINE MIR 17 102 -106 245 237 0 0 chr5 189380846 189380905 -13704627 - MER96 DNA MER1_type? 0 175 117 263 268 130 51 chr5 189382134 189382272 -13703260 + MIR SINE MIR 63 211 -51 210 91 0 0 chr5 189383389 189383422 -13702110 + (T)n Simple_repeat Simple_repeat 1 33 0 189 250 163 0 chr5 189383561 189383653 -13701879 - MIR SINE MIR -67 141 35 634 215 8 2 chr5 189384492 189384639 -13700893 - MIR SINE MIR -55 153 2 231 114 0 0 chr5 189385013 189385048 -13700484 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 0 0 0 chr5 189385387 189385409 -13700123 + (T)n Simple_repeat Simple_repeat 1 22 0 232 258 16 0 chr5 189388605 189388667 -13696865 + L2 LINE L2 3206 3268 -4 230 182 23 0 chr5 189389512 189389556 -13695976 + GA-rich Low_complexity Low_complexity 3 47 0 2321 67 0 0 chr5 189391532 189391830 -13693702 + AluY SINE Alu 1 298 -13 381 235 9 52 chr5 189392139 189392254 -13693278 - MER81 DNA DNA -3 111 2 199 238 0 0 chr5 189393452 189393494 -13692038 + MIR3 SINE MIR 156 197 -11 220 278 11 44 chr5 189394044 189394134 -13691398 - MIR SINE MIR -9 253 167 261 305 38 30 chr5 189394521 189394652 -13690880 - MIR SINE MIR -125 137 6 364 216 72 10 chr5 189395544 189395641 -13689891 + L2 LINE L2 3150 3252 -20 4048 152 1 5 chr5 189395651 189396298 -13689234 + L1MB5 LINE L1 5431 6075 -99 1871 115 0 7 chr5 189396358 189396628 -13688904 + AluSg SINE Alu 38 305 -5 582 137 21 0 chr5 189396628 189396723 -13688809 + L1MB5 LINE L1 6065 6161 -13 405 0 0 0 chr5 189397261 189397306 -13688226 + (TG)n Simple_repeat Simple_repeat 1 45 0 311 0 0 25 chr5 189397864 189397904 -13687628 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 340 279 18 27 chr5 189397964 189398075 -13687457 + MIR3 SINE MIR 83 192 -16 355 269 67 37 chr5 189400598 189400732 -13684800 - MIR3 SINE MIR -5 203 66 381 179 0 122 chr5 189400963 189401086 -13684446 + MER74B LTR ERVL 56 163 -459 896 226 30 13 chr5 189401186 189401416 -13684116 + MER74A LTR ERVL 262 495 -63 1625 36 5 0 chr5 189401552 189401746 -13683786 - L1PA5 LINE L1 -4 6150 5956 1458 103 5 0 chr5 189402605 189402809 -13682723 + L1PB1 LINE L1 5946 6150 -1 2079 114 0 0 chr5 189403095 189403413 -13682119 - AluSq SINE Alu 0 320 3 1477 115 126 52 chr5 189404377 189404647 -13680885 + AluJb SINE Alu 1 290 -22 538 467 111 12 chr5 189404683 189405105 -13680427 - L1MC4a LINE L1 -1884 5924 5461 2319 76 0 16 chr5 189405337 189405641 -13679891 + AluSq SINE Alu 10 308 -5 1724 235 105 10 chr5 189405666 189406152 -13679380 + L1ME1 LINE L1 5630 6161 -5 269 221 48 19 chr5 189406160 189406264 -13679268 - L1ME4a LINE L1 -74 6047 5941 470 267 80 68 chr5 189407147 189407323 -13678209 + MIR SINE MIR 36 213 -49 261 268 285 33 chr5 189407296 189407499 -13678033 - MIR SINE MIR 0 262 16 358 339 79 11 chr5 189407499 189407676 -13677856 - MER5A DNA MER1_type 0 189 1 331 214 79 0 chr5 189408471 189408560 -13676972 + Charlie8 DNA MER1_type 68 163 -2254 292 230 23 35 chr5 189408692 189408779 -13676753 - MIR SINE MIR 0 262 177 787 183 8 0 chr5 189408782 189408913 -13676619 - FRAM SINE Alu -24 152 21 2037 123 3 3 chr5 189408946 189409256 -13676276 + AluSg SINE Alu 1 310 0 309 282 35 0 chr5 189409281 189409366 -13676166 - MIR SINE MIR -101 161 74 467 307 33 0 chr5 189409484 189409637 -13675895 - Charlie8 DNA MER1_type -2165 252 95 833 310 65 0 chr5 189409728 189409960 -13675572 + MIR SINE MIR 2 248 -14 1128 259 24 14 chr5 189411419 189411857 -13673675 - MLT1D LTR MaLR -1 504 4 643 278 46 6 chr5 189412230 189412403 -13673129 - MIR SINE MIR -76 186 7 1998 165 15 3 chr5 189412702 189413041 -13672491 + L1MC2 LINE L1 5982 6324 -20 2239 103 0 6 chr5 189413099 189413410 -13672122 - AluY SINE Alu -2 309 1 262 308 37 68 chr5 189413621 189413819 -13671713 + MIR SINE MIR 18 203 -59 1626 146 11 0 chr5 189413829 189414089 -13671443 + AluJb SINE Alu 12 274 -38 410 287 155 0 chr5 189414197 189414326 -13671206 - MIR SINE MIR -106 156 8 180 0 0 0 chr5 189414801 189414821 -13670711 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 343 436 25 0 chr5 189414869 189415032 -13670500 - L2 LINE L2 0 3272 3106 180 271 139 49 chr5 189415384 189415506 -13670026 + L2 LINE L2 3139 3271 -1 213 154 0 0 chr5 189415511 189415550 -13669982 + GA-rich Low_complexity Low_complexity 3 41 0 410 292 8 22 chr5 189415621 189415850 -13669682 + GA-rich Low_complexity Low_complexity 1 232 -432 2087 129 0 6 chr5 189415850 189416161 -13669371 + AluSq SINE Alu 1 309 -4 410 292 8 22 chr5 189416161 189416295 -13669237 + GA-rich Low_complexity Low_complexity 232 664 0 345 358 83 31 chr5 189416706 189417155 -13668377 + L2 LINE L2 2565 3045 -227 748 257 136 52 chr5 189417507 189417927 -13667605 - L2 LINE L2 -2 3311 2857 198 279 23 0 chr5 189418529 189418572 -13666960 + L2 LINE L2 3207 3250 -22 2162 118 7 0 chr5 189419208 189419514 -13666018 - AluSq SINE Alu -5 308 1 307 330 0 0 chr5 189420094 189420182 -13665350 - MIR3 SINE MIR -43 165 78 196 298 53 21 chr5 189420266 189420360 -13665172 + L2 LINE L2 2328 2424 -890 * 267 186 127 110 chr5 189420344 189420462 -13665070 + L2 LINE L2 3192 3311 -2 527 365 15 11 chr5 189421051 189421311 -13664221 - MIR SINE MIR 0 262 2 247 208 0 0 chr5 189422052 189422105 -13663427 + MIR SINE MIR 81 133 -75 1041 203 60 63 chr5 189422926 189423226 -13662306 + L1MD2 LINE L1 6061 6359 0 233 266 176 50 chr5 189423360 189423559 -13661973 - MIR SINE MIR -13 249 26 234 0 0 0 chr5 189424900 189424926 -13660606 + (CA)n Simple_repeat Simple_repeat 1 26 0 342 0 0 0 chr5 189425032 189425070 -13660462 + (TA)n Simple_repeat Simple_repeat 2 39 0 510 271 90 29 chr5 189425095 189425372 -13660160 - L1ME4a LINE L1 -216 5905 5612 1890 116 4 4 chr5 189426548 189426824 -13658708 + AluSq SINE Alu 1 276 -37 321 26 0 0 chr5 189426828 189426866 -13658666 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 431 114 11 102 chr5 189427136 189427224 -13658308 - MADE1 DNA Mariner 0 80 1 348 263 94 6 chr5 189477613 189477773 -13607759 + L1MB7 LINE L1 5995 6168 -16 232 306 0 42 chr5 189478517 189478589 -13606943 + L2 LINE L2 3245 3313 0 328 287 31 31 chr5 189478616 189478745 -13606787 - MIR SINE MIR -93 169 41 230 322 21 63 chr5 189478878 189479021 -13606511 + L2 LINE L2 3175 3311 -2 2027 103 7 23 chr5 189480467 189480767 -13604765 - AluSx SINE Alu -17 295 1 283 319 64 25 chr5 189481639 189481796 -13603736 + MER5B DNA MER1_type 2 164 -14 1763 146 30 7 chr5 189482272 189482567 -13602965 - AluJb SINE Alu -10 302 1 1864 184 14 27 chr5 189482703 189483073 -13602459 + MLT1A1 LTR MaLR 1 365 0 741 213 89 20 chr5 189483111 189483313 -13602219 - MER58A DNA MER1_type 0 224 9 2030 120 10 0 chr5 189483614 189483914 -13601618 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr5 189485204 189485224 -13600308 + (A)n Simple_repeat Simple_repeat 1 20 0 226 333 0 26 chr5 189485248 189485362 -13600170 + A-rich Low_complexity Low_complexity 2 112 0 2033 158 80 42 chr5 189485435 189485884 -13599648 - MER31B LTR ERV1 0 466 1 275 277 69 20 chr5 189485983 189486084 -13599448 + MIR SINE MIR 156 261 -1 248 216 32 136 chr5 189486289 189486414 -13599118 + L2 LINE L2 3197 3308 -5 299 295 75 35 chr5 189486842 189487015 -13598517 + MIR SINE MIR 82 261 -1 25 0 0 0 chr5 189487019 189487044 -13598488 + AT_rich Low_complexity Low_complexity 1 25 0 215 349 0 0 chr5 189487256 189487319 -13598213 - MIR SINE MIR -114 148 86 519 266 69 37 chr5 189487366 189487584 -13597948 - MER102a DNA MER1_type -1 329 105 1969 114 10 0 chr5 189489189 189489488 -13596044 + AluSc SINE Alu 1 302 -7 2272 75 0 0 chr5 189489630 189489922 -13595610 + AluSq SINE Alu 9 300 -13 642 188 8 8 chr5 189489922 189490039 -13595493 - AluSq/x SINE Alu -195 118 2 458 200 48 9 chr5 189490169 189490274 -13595258 - MER5A DNA MER1_type -77 112 4 387 233 110 48 chr5 189490282 189490428 -13595104 - MER5A DNA MER1_type 0 189 35 213 234 0 65 chr5 189490486 189490563 -13594969 + MIR SINE MIR 61 132 -130 747 283 60 4 chr5 189491059 189491292 -13594240 - MIR SINE MIR -14 248 3 249 303 37 18 chr5 189491639 189491748 -13593784 - MER117 DNA MER1_type -34 163 53 576 234 62 52 chr5 189491827 189492019 -13593513 + MIR3 SINE MIR 8 201 -7 773 239 113 0 chr5 189492506 189492728 -13592804 - MIR SINE MIR -1 261 15 327 348 7 22 chr5 189492797 189492935 -13592597 + L2 LINE L2 3134 3269 -3 797 247 45 22 chr5 189493032 189493255 -13592277 - MIR SINE MIR -13 249 22 263 315 65 0 chr5 189493662 189493770 -13591762 + MIR3 SINE MIR 86 200 -8 202 282 129 12 chr5 189493951 189494036 -13591496 - L2 LINE L2 0 3272 3178 369 347 78 47 chr5 189494299 189494534 -13590998 - L2 LINE L2 -337 2977 2728 285 29 0 0 chr5 189494534 189494568 -13590964 + (TG)n Simple_repeat Simple_repeat 1 34 0 369 347 78 47 chr5 189494568 189494652 -13590880 - L2 LINE L2 -586 2728 2648 330 26 0 0 chr5 189495168 189495207 -13590325 + (CA)n Simple_repeat Simple_repeat 2 40 0 186 43 0 0 chr5 189495407 189495430 -13590102 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 699 328 32 53 chr5 189495616 189495936 -13589596 + L2 LINE L2 2879 3189 -124 930 183 34 85 chr5 189495936 189496029 -13589503 + MER58A DNA MER1_type 2 98 -2322 1861 150 0 10 chr5 189496029 189496323 -13589209 - AluSx SINE Alu -16 296 6 930 183 34 85 chr5 189496323 189496464 -13589068 + MER58A DNA MER1_type 98 224 0 699 328 32 53 chr5 189496464 189496576 -13588956 + L2 LINE L2 3189 3302 -11 314 200 27 27 chr5 189497873 189497948 -13587584 - MER96 DNA MER1_type? -91 84 10 23 0 0 0 chr5 189499189 189499212 -13586320 + AT_rich Low_complexity Low_complexity 1 23 0 1187 288 85 19 chr5 189499675 189500249 -13585283 + L1ME4a LINE L1 5499 6110 -11 2710 0 0 3 chr5 189500294 189500596 -13584936 - AluYa5 SINE Alu -10 301 1 423 216 147 0 chr5 189501906 189502022 -13583510 + MIR SINE MIR 18 150 -112 2236 93 0 0 chr5 189503017 189503319 -13582213 + AluY SINE Alu 1 302 -9 2179 109 3 0 chr5 189503331 189503643 -13581889 + AluSq SINE Alu 1 313 0 410 281 0 0 chr5 189503891 189503980 -13581552 + MIR SINE MIR 58 146 -116 406 263 76 17 chr5 189503981 189504099 -13581433 - L2 LINE L2 -2 3311 3187 184 405 92 0 chr5 189504111 189504264 -13581268 - L2 LINE L2 0 3313 3147 213 213 128 57 chr5 189505152 189505293 -13580239 - L2 LINE L2 -225 3088 2938 226 274 47 47 chr5 189505408 189505455 -13580077 - L2 LINE L2 -785 2529 2483 360 0 0 0 chr5 189505455 189505495 -13580037 + (TG)n Simple_repeat Simple_repeat 1 40 0 226 274 47 47 chr5 189505495 189505553 -13579979 - L2 LINE L2 -830 2484 2424 319 300 64 9 chr5 189505599 189505709 -13579823 + MIR SINE MIR 28 143 -119 180 143 0 0 chr5 189506139 189506167 -13579365 + L3b LINE CR1 1535 1562 -21 25 0 0 0 chr5 189506352 189506377 -13579155 + AT_rich Low_complexity Low_complexity 1 25 0 2127 112 7 0 chr5 189506377 189506663 -13578869 - AluSq SINE Alu -25 288 1 818 246 5 23 chr5 189506675 189506890 -13578642 - L1MB8 LINE L1 -1 6177 5967 294 221 63 71 chr5 189507248 189507375 -13578157 - MIR3 SINE MIR -79 129 4 407 298 0 0 chr5 189508562 189508703 -13576829 + (CA)n Simple_repeat Simple_repeat 2 142 0 530 262 21 0 chr5 189509192 189509337 -13576195 - MIR SINE MIR -27 235 88 474 304 5 16 chr5 189513498 189513682 -13571850 - MIR SINE MIR -61 201 20 602 282 66 36 chr5 189513710 189514015 -13571517 + L1ME4a LINE L1 5571 5884 -237 318 211 40 40 chr5 189514010 189514148 -13571384 + L1ME1 LINE L1 5722 5856 -310 * 296 280 43 0 chr5 189515011 189515104 -13570428 + MER5C DNA MER1_type 27 123 -201 540 157 130 16 chr5 189515229 189515295 -13570237 + MER5C DNA MER1_type 118 175 -149 2059 147 166 0 chr5 189515295 189515662 -13569870 + MSTC LTR MaLR 1 428 0 540 157 130 16 chr5 189515662 189515780 -13569752 + MER5C DNA MER1_type 175 323 -1 424 238 107 15 chr5 189516663 189516832 -13568700 + MIR SINE MIR 55 241 -21 906 158 0 0 chr5 189517032 189517171 -13568361 + FRAM SINE Alu 12 150 -26 23 86 0 0 chr5 189517171 189517229 -13568303 + AT_rich Low_complexity Low_complexity 1 58 0 291 241 90 38 chr5 189517922 189518055 -13567477 - MER5A DNA MER1_type -7 182 43 334 257 73 28 chr5 189518836 189518945 -13566587 + MLT1K LTR MaLR 310 423 -165 436 299 54 11 chr5 189519786 189519970 -13565562 + MIR SINE MIR 23 214 -48 1321 86 0 0 chr5 189520016 189520179 -13565353 + AluSg/x SINE Alu 134 296 -16 629 234 122 9 chr5 189520500 189520722 -13564810 + MIR SINE MIR 2 248 -14 398 294 0 0 chr5 189521276 189521368 -13564164 - MER81 DNA DNA -22 92 1 435 305 47 32 chr5 189522846 189523036 -13562496 + MIR3 SINE MIR 5 197 -11 435 351 20 10 chr5 189524004 189524206 -13561326 - MIR SINE MIR 0 262 59 250 312 19 57 chr5 189524274 189524431 -13561101 - MIR SINE MIR -1 261 111 2192 117 16 3 chr5 189525568 189525876 -13559656 - AluSx SINE Alu 0 312 1 639 270 11 6 chr5 189525888 189526066 -13559466 - MIR SINE MIR -56 206 28 189 195 0 0 chr5 189528923 189528964 -13556568 + CT-rich Low_complexity Low_complexity 1 41 0 2313 82 0 0 chr5 189529360 189529679 -13555853 + AluSg SINE Alu 1 319 0 753 160 8 0 chr5 189529705 189529830 -13555702 + MER5A DNA MER1_type 6 131 -58 315 0 0 0 chr5 189529830 189529865 -13555667 + (TG)n Simple_repeat Simple_repeat 2 36 0 1260 223 15 11 chr5 189529865 189530139 -13555393 - AluJb SINE Alu -27 285 11 883 224 0 16 chr5 189530774 189530966 -13554566 + MER5A DNA MER1_type 1 189 0 187 328 134 15 chr5 189532220 189532354 -13553178 - MIR3 SINE MIR -55 153 4 312 27 0 0 chr5 189532701 189532738 -13552794 + (TAA)n Simple_repeat Simple_repeat 2 38 0 2113 110 3 32 chr5 189533105 189533414 -13552118 + AluSx SINE Alu 1 300 -12 214 299 125 7 chr5 189533800 189533944 -13551588 - MIR SINE MIR -70 192 32 2010 124 3 3 chr5 189535063 189535381 -13550151 - AluSx SINE Alu 0 318 1 303 285 126 7 chr5 189535861 189536012 -13549520 - L1ME4a LINE L1 -15 6106 5938 566 130 14 14 chr5 189536054 189536192 -13549340 + (TA)n Simple_repeat Simple_repeat 2 139 0 360 0 0 0 chr5 189536192 189536232 -13549300 + (GA)n Simple_repeat Simple_repeat 2 41 0 572 245 72 95 chr5 189537490 189537796 -13547736 + Charlie8 DNA MER1_type 37 335 -2082 254 300 0 0 chr5 189538565 189538645 -13546887 + (CATA)n Simple_repeat Simple_repeat 1 80 0 2490 67 0 10 chr5 189538687 189539000 -13546532 + AluY SINE Alu 2 311 0 2123 163 24 75 chr5 189540192 189540646 -13544886 + Tigger2a DNA MER2_type 4 434 0 250 336 41 20 chr5 189540673 189540819 -13544713 - MIR SINE MIR -113 149 1 1807 102 106 0 chr5 189542325 189542618 -13542914 + AluSq SINE Alu 1 320 0 408 222 117 53 chr5 189542929 189543120 -13542412 - L1ME4a LINE L1 -379 5742 5546 253 294 0 12 chr5 189543399 189543484 -13542048 + MIR SINE MIR 33 116 -92 23 54 0 0 chr5 189543802 189543839 -13541693 + AT_rich Low_complexity Low_complexity 1 37 0 616 231 76 24 chr5 189543909 189544155 -13541377 + L1MC5 LINE L1 7000 7249 -733 887 176 35 44 chr5 189544390 189544617 -13540915 - MER33 DNA MER1_type -95 229 5 333 319 71 25 chr5 189544632 189544805 -13540727 + L1MC5 LINE L1 7518 7706 -255 555 69 0 0 chr5 189544805 189544877 -13540655 - L1PA6 LINE L1 0 6154 6083 333 319 71 25 chr5 189544877 189544941 -13540591 + L1MC5 LINE L1 7706 7766 -195 485 244 76 116 chr5 189547737 189547853 -13537679 + L1MC4a LINE L1 5575 5694 -2114 2196 68 0 0 chr5 189547853 189548119 -13537413 + AluY SINE Alu 36 301 -10 485 244 76 116 chr5 189548119 189548346 -13537186 + L1MC4a LINE L1 5694 5904 -1904 25 75 0 0 chr5 189548474 189548527 -13537005 + AT_rich Low_complexity Low_complexity 1 53 0 264 253 21 21 chr5 189550681 189550776 -13534756 - MIR SINE MIR -8 254 160 394 281 113 5 chr5 189550787 189550972 -13534560 - MIR SINE MIR -6 256 52 2567 72 0 0 chr5 189551015 189551319 -13534213 + AluY SINE Alu 1 304 -7 371 306 124 50 chr5 189552095 189552356 -13533176 + L2 LINE L2 2439 2679 -635 2185 120 0 3 chr5 189552356 189552655 -13532877 - AluSg SINE Alu -12 298 1 371 306 124 50 chr5 189552655 189552694 -13532838 + L2 LINE L2 2679 2714 -600 1145 180 62 0 chr5 189552694 189552905 -13532627 + MER58A DNA MER1_type 1 224 0 371 306 124 50 chr5 189552905 189553022 -13532510 + L2 LINE L2 2714 2888 -426 306 87 0 0 chr5 189553323 189553369 -13532163 + (TG)n Simple_repeat Simple_repeat 2 47 0 1664 188 0 11 chr5 189553381 189553652 -13531880 - AluJo SINE Alu -44 268 1 265 163 0 0 chr5 189553836 189553885 -13531647 - L2 LINE L2 -10 3303 3255 221 400 54 11 chr5 189555283 189555468 -13530064 + L2 LINE L2 2566 2758 -556 4687 161 27 36 chr5 189555487 189556380 -13529152 + L1MB2 LINE L1 5286 6170 -1 228 309 118 0 chr5 189556916 189556984 -13528548 + L2 LINE L2 3231 3306 -7 187 239 56 28 chr5 189557440 189557511 -13528021 - L3b LINE CR1 -126 1457 1385 580 259 133 12 chr5 189557859 189558025 -13527507 - MIR SINE MIR -1 261 76 782 261 37 9 chr5 189558546 189558761 -13526771 + MIR SINE MIR 29 249 -13 351 312 22 14 chr5 189559502 189559640 -13525892 - L2 LINE L2 0 3272 3134 472 15 0 30 chr5 189560479 189560546 -13524986 + (CA)n Simple_repeat Simple_repeat 2 66 0 400 278 114 22 chr5 189560739 189560924 -13524608 + MIR SINE MIR 3 210 -52 228 294 0 29 chr5 189560953 189561021 -13524511 - MER91 DNA MER1_type -71 69 4 1974 127 3 3 chr5 189561393 189561693 -13523839 + AluSc SINE Alu 1 300 -9 384 329 43 14 chr5 189561693 189561833 -13523699 - MIR SINE MIR -88 174 31 214 303 45 101 chr5 189561850 189562048 -13523484 - L2 LINE L2 -476 2838 2652 293 350 156 19 chr5 189562625 189562882 -13522650 - L2 LINE L2 -90 3182 2891 500 226 42 156 chr5 189562899 189562979 -13522553 - MIR SINE MIR -19 243 156 2270 80 0 32 chr5 189562979 189563293 -13522239 + AluSg SINE Alu 1 304 -6 500 226 42 156 chr5 189563293 189563424 -13522108 - MIR SINE MIR -106 156 56 208 103 0 26 chr5 189563486 189563525 -13522007 + L2 LINE L2 3028 3065 -207 2126 96 3 0 chr5 189564371 189564662 -13520870 - AluSg SINE Alu -16 294 3 637 305 131 47 chr5 189564920 189565752 -13519780 - L2 LINE L2 0 3313 2405 466 318 43 7 chr5 189565788 189566000 -13519532 + MIR SINE MIR 35 261 -1 318 252 45 63 chr5 189566099 189566210 -13519322 + MER91B DNA MER1_type 22 130 -60 275 311 0 0 chr5 189566223 189566297 -13519235 + MER91B DNA MER1_type 87 160 -30 2142 101 0 0 chr5 189566772 189567060 -13518472 - AluSg SINE Alu -22 288 1 580 295 111 14 chr5 189567953 189568170 -13517362 - MIR SINE MIR -8 254 17 525 259 122 24 chr5 189569423 189569628 -13515904 + MIR SINE MIR 20 244 -18 349 244 35 17 chr5 189569892 189570007 -13515525 + MIR SINE MIR 91 207 -55 851 243 72 18 chr5 189570182 189570545 -13514987 + MLT1K LTR MaLR 134 583 -5 476 281 79 6 chr5 189571606 189571777 -13513755 + MIR SINE MIR 31 212 -50 2110 111 14 0 chr5 189573378 189573667 -13511865 - AluSg SINE Alu -17 293 1 226 298 250 16 chr5 189574129 189574317 -13511215 - MIR SINE MIR -22 240 9 1077 182 37 8 chr5 189576076 189576318 -13509214 - AluJb SINE Alu -53 259 11 322 302 53 53 chr5 189576362 189576551 -13508981 + MIR SINE MIR 12 200 -62 2136 97 23 7 chr5 189577233 189577532 -13508000 + AluSc SINE Alu 1 304 -5 1959 127 3 32 chr5 189579151 189579467 -13506065 + AluSx SINE Alu 6 312 0 214 278 31 72 chr5 189581642 189581739 -13503793 + MIR SINE MIR 21 113 -149 1517 243 24 0 chr5 189581739 189582073 -13503459 + MLT1A2 LTR MaLR 1 342 -32 546 164 145 20 chr5 189582078 189582230 -13503302 + Tigger1 DNA MER2_type 21 191 -2227 * 1123 168 24 5 chr5 189582199 189582407 -13503125 + Tigger1 DNA MER2_type 2206 2417 -1 263 350 86 0 chr5 189582444 189582561 -13502971 + MIR SINE MIR 111 237 -25 335 253 121 20 chr5 189582795 189582894 -13502638 - L2 LINE L2 0 3313 3205 335 180 40 60 chr5 189583121 189583221 -13502311 - L2 LINE L2 -39 3233 3136 311 65 22 0 chr5 189583674 189583720 -13501812 + (TC)n Simple_repeat Simple_repeat 2 48 0 234 0 0 0 chr5 189583720 189583746 -13501786 + (CA)n Simple_repeat Simple_repeat 1 26 0 2099 138 62 6 chr5 189584072 189584427 -13501105 + THE1C LTR MaLR 1 375 0 197 306 83 0 chr5 189585675 189585747 -13499785 + MIR SINE MIR 59 136 -126 473 155 0 0 chr5 189585797 189585868 -13499664 - FLAM SINE Alu -25 118 48 758 266 49 40 chr5 189585936 189586162 -13499370 - MIR SINE MIR 0 262 35 21 0 0 0 chr5 189586986 189587007 -13498525 + AT_rich Low_complexity Low_complexity 1 21 0 342 49 0 0 chr5 189587573 189587614 -13497918 - MER53 DNA DNA -148 41 1 2017 108 3 26 chr5 189587734 189588040 -13497492 + AluSx SINE Alu 1 299 -13 189 398 19 0 chr5 189588077 189588180 -13497352 - MIR SINE MIR -55 207 103 647 329 40 0 chr5 189589912 189590161 -13495371 + MIR SINE MIR 2 260 -2 245 304 189 26 chr5 189590853 189591080 -13494452 + L2 LINE L2 2991 3254 -59 282 29 0 0 chr5 189591207 189591242 -13494290 + (CAGG)n Simple_repeat Simple_repeat 2 36 0 2112 128 0 0 chr5 189591788 189592084 -13493448 + AluSx SINE Alu 6 301 -11 335 347 41 0 chr5 189592628 189592749 -13492783 + MIR3 SINE MIR 79 204 -4 1233 162 112 72 chr5 189592763 189593041 -13492491 + AluJo SINE Alu 1 289 -23 495 0 0 0 chr5 189593046 189593101 -13492431 + (CA)n Simple_repeat Simple_repeat 2 56 0 315 176 95 27 chr5 189593700 189593774 -13491758 - MIR SINE MIR -13 249 171 516 293 7 0 chr5 189593830 189593980 -13491552 + MIR SINE MIR 109 259 -3 203 206 164 82 chr5 189593987 189594133 -13491399 - MIR SINE MIR -104 158 1 417 289 13 39 chr5 189595216 189595372 -13490160 + MER5A DNA MER1_type 35 186 -3 227 337 139 10 chr5 189596761 189596862 -13488670 - MER5A DNA MER1_type -26 163 50 924 201 41 46 chr5 189597085 189597304 -13488228 + MER58A DNA MER1_type 1 218 -6 659 279 89 61 chr5 189597325 189597752 -13487780 + MLT1J1 LTR MaLR 8 446 0 249 261 98 22 chr5 189598143 189598235 -13487297 + MIR SINE MIR 45 143 -65 2163 96 0 7 chr5 189598462 189598765 -13486767 - AluSx SINE Alu -11 301 1 587 213 238 0 chr5 189598941 189599105 -13486427 - MER3 DNA MER1_type 0 209 7 265 270 95 40 chr5 189601121 189601269 -13484263 - MIR SINE MIR -60 202 47 561 282 83 32 chr5 189603553 189603830 -13481702 + L1ME4a LINE L1 5725 6015 -106 24 0 0 0 chr5 189603835 189603859 -13481673 + AT_rich Low_complexity Low_complexity 1 24 0 199 292 146 0 chr5 189603987 189604076 -13481456 - L2 LINE L2 -32 3281 3180 238 324 14 0 chr5 189604228 189604302 -13481230 + MIR SINE MIR 83 157 -105 698 245 94 10 chr5 189605499 189605691 -13479841 + MIR SINE MIR 55 262 0 229 377 16 8 chr5 189605835 189605957 -13479575 - MIR3 SINE MIR -50 158 36 860 173 28 12 chr5 189606449 189606634 -13478898 + MER5A DNA MER1_type 1 188 -1 290 269 25 42 chr5 189607485 189607604 -13477928 - MIR SINE MIR -59 149 33 362 298 162 32 chr5 189608378 189608981 -13476551 - L2 LINE L2 -1 3312 2619 3742 204 28 46 chr5 189609924 189610926 -13474606 - L1MA9 LINE L1 -38 6274 5301 2548 66 0 3 chr5 189610926 189611227 -13474305 - AluSc SINE Alu -9 300 1 3742 204 28 46 chr5 189611227 189611680 -13473852 - L1MA9 LINE L1 -1011 5301 4841 421 273 12 75 chr5 189611745 189611862 -13473670 + MER5B DNA MER1_type 27 133 -45 1849 138 35 14 chr5 189611862 189612028 -13473504 - AluJb SINE Alu -15 297 121 414 0 0 0 chr5 189612028 189612074 -13473458 + (TG)n Simple_repeat Simple_repeat 2 47 0 1849 138 35 14 chr5 189612074 189612197 -13473335 - AluJb SINE Alu -191 121 2 421 273 12 75 chr5 189612197 189612240 -13473292 + MER5B DNA MER1_type 133 177 -1 602 223 20 66 chr5 189612423 189612483 -13473049 - MIR SINE MIR -17 245 184 2310 92 7 0 chr5 189612483 189612786 -13472746 + AluY SINE Alu 1 305 -6 602 223 20 66 chr5 189612786 189612922 -13472610 - MIR SINE MIR -78 184 58 443 182 148 17 chr5 189615134 189615366 -13470166 - MER5C DNA MER1_type -4 320 2 322 282 16 16 chr5 189615755 189615879 -13469653 - MIR SINE MIR -118 144 21 601 82 0 0 chr5 189616165 189616250 -13469282 - L1PA4 LINE L1 -1 6154 6070 2415 90 0 3 chr5 189616421 189616732 -13468800 - AluY SINE Alu -1 310 1 264 247 52 31 chr5 189616892 189616989 -13468543 + MLT1L LTR MaLR 517 615 0 563 228 124 0 chr5 189618348 189618493 -13467039 - L2 LINE L2 -2 3270 3108 383 251 147 37 chr5 189620158 189620349 -13465183 - MIR SINE MIR -14 248 37 2759 159 113 4 chr5 189621203 189621700 -13463832 + L1MB7 LINE L1 5444 5994 -190 1197 199 7 59 chr5 189621820 189622106 -13463426 - AluJo SINE Alu -27 285 15 269 333 76 34 chr5 189623243 189623480 -13462052 + MIR SINE MIR 16 262 0 359 371 0 0 chr5 189625591 189625715 -13459817 - L2 LINE L2 0 3272 3149 267 282 154 17 chr5 189625745 189625862 -13459670 - L3 LINE CR1 -544 1033 901 210 122 122 0 chr5 189625942 189625983 -13459549 + L2 LINE L2 3264 3309 -4 234 207 0 0 chr5 189626905 189626963 -13458569 + GA-rich Low_complexity Low_complexity 1 58 0 1501 208 55 64 chr5 189628818 189628908 -13456624 + MLT1C LTR MaLR 1 90 -377 2238 107 0 10 chr5 189628908 189629207 -13456325 + AluSx SINE Alu 4 299 -13 1501 208 55 64 chr5 189629207 189629587 -13455945 + MLT1C LTR MaLR 90 467 0 276 348 116 35 chr5 189629835 189630154 -13455378 + L2 LINE L2 2926 3270 -2 744 285 98 44 chr5 189630253 189630659 -13454873 - L2 LINE L2 -7 3306 2827 2307 83 30 0 chr5 189630659 189630959 -13454573 + AluSc SINE Alu 1 309 0 744 285 98 44 chr5 189630959 189631241 -13454291 - L2 LINE L2 -486 2827 2562 355 216 78 20 chr5 189631981 189632083 -13453449 + MIR SINE MIR 59 166 -96 296 266 181 15 chr5 189634454 189634653 -13450879 - MIR SINE MIR -30 232 1 643 251 92 51 chr5 189634665 189634908 -13450624 + MER102b DNA MER1_type 25 284 -1144 1659 170 50 50 chr5 189634908 189635206 -13450326 + MLT1A1 LTR MaLR 2 303 -62 2035 134 0 7 chr5 189635206 189635522 -13450010 + AluSx SINE Alu 1 314 0 1659 170 50 50 chr5 189635522 189635586 -13449946 + MLT1A1 LTR MaLR 302 365 0 643 251 92 51 chr5 189635586 189635637 -13449895 + MER102b DNA MER1_type 284 331 -10 355 337 17 11 chr5 189636030 189636205 -13449327 + MIR SINE MIR 25 200 -62 1953 88 0 0 chr5 189637061 189637312 -13448220 + AluY SINE Alu 60 310 -1 229 230 0 69 chr5 189637749 189637836 -13447696 + L2 LINE L2 3150 3230 -83 461 304 51 42 chr5 189639480 189639717 -13445815 - MIR SINE MIR -19 243 5 257 301 0 11 chr5 189639910 189640003 -13445529 - MIR3 SINE MIR -5 203 112 512 243 113 17 chr5 189641025 189641202 -13444330 - MIR SINE MIR -32 230 37 1099 283 30 22 chr5 189641448 189642019 -13443513 + L1ME4a LINE L1 5299 5876 -245 180 0 0 0 chr5 189642042 189642062 -13443470 + (A)n Simple_repeat Simple_repeat 1 20 0 2102 143 13 0 chr5 189642227 189642535 -13442997 + AluSx SINE Alu 1 312 0 421 257 103 23 chr5 189644182 189644357 -13441175 - MIR SINE MIR -48 214 26 198 0 0 0 chr5 189644851 189644873 -13440659 + (CAGA)n Simple_repeat Simple_repeat 3 24 0 270 106 0 0 chr5 189645897 189645944 -13439588 + (A)n Simple_repeat Simple_repeat 1 47 0 525 231 95 0 chr5 189646048 189646195 -13439337 + MIR SINE MIR 10 170 -92 394 238 44 47 chr5 189647363 189647533 -13437999 + MIR SINE MIR 29 202 -60 2244 161 51 5 chr5 189648617 189649009 -13436523 + MSTB LTR MaLR 1 410 -16 916 286 53 67 chr5 189649034 189649485 -13436047 + LTR67 LTR ERVL 113 557 0 214 205 0 0 chr5 189649496 189649535 -13435997 + (TAA)n Simple_repeat Simple_repeat 2 40 0 443 273 41 6 chr5 189649536 189649708 -13435824 - MIR SINE MIR -1 261 84 247 228 0 18 chr5 189650931 189650988 -13434544 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 262 204 10 71 chr5 189651523 189651621 -13433911 + CT-rich Low_complexity Low_complexity 3 94 0 288 77 0 0 chr5 189652038 189652077 -13433455 + (CA)n Simple_repeat Simple_repeat 1 39 0 2521 141 25 28 chr5 189652091 189652353 -13433179 + Tigger2a DNA MER2_type 1 263 -2445 2352 90 0 10 chr5 189652353 189652664 -13432868 + AluSg SINE Alu 1 308 -2 2521 141 25 28 chr5 189652664 189652833 -13432699 + Tigger2a DNA MER2_type 263 431 -3 25 0 0 0 chr5 189652968 189652993 -13432539 + AT_rich Low_complexity Low_complexity 1 25 0 221 240 0 0 chr5 189653520 189653570 -13431962 - MIR SINE MIR -114 148 99 251 353 60 0 chr5 189653846 189653962 -13431570 - L2 LINE L2 0 3313 3191 201 39 0 0 chr5 189654178 189654204 -13431328 + (CAGAGA)n Simple_repeat Simple_repeat 3 28 0 21 36 0 0 chr5 189654900 189654928 -13430604 + AT_rich Low_complexity Low_complexity 1 28 0 448 229 28 20 chr5 189655143 189655392 -13430140 + GA-rich Low_complexity Low_complexity 1 250 0 186 275 17 17 chr5 189655437 189655557 -13429975 + GA-rich Low_complexity Low_complexity 4 123 0 1030 178 80 5 chr5 189655562 189655900 -13429632 - MER31A LTR ERV1 -5 480 2 442 266 95 31 chr5 189655912 189656134 -13429398 - MIR SINE MIR 0 262 27 620 284 37 5 chr5 189657397 189657587 -13427945 - MIR SINE MIR -35 227 32 209 253 132 11 chr5 189657628 189657719 -13427813 - MIR SINE MIR -66 196 95 1756 111 18 81 chr5 189659875 189660208 -13425324 - AluSq SINE Alu -1 312 1 333 236 40 108 chr5 189660210 189660358 -13425174 + Charlie8 DNA MER1_type 107 244 -2173 290 206 29 0 chr5 189660440 189660508 -13425024 + MER91A DNA MER1_type 125 194 -2 712 275 50 50 chr5 189662099 189662441 -13423091 + L1ME4a LINE L1 5379 5720 -401 275 217 66 57 chr5 189662582 189662688 -13422844 + MER5C DNA MER1_type 2 108 -216 200 61 61 0 chr5 189662728 189662761 -13422771 + A-rich Low_complexity Low_complexity 4 38 0 565 270 132 31 chr5 189663127 189663483 -13422049 + L1ME4a LINE L1 5728 6119 -2 195 162 0 0 chr5 189664017 189664054 -13421478 + (CAA)n Simple_repeat Simple_repeat 3 39 0 222 236 27 143 chr5 189664261 189664337 -13421195 + MER5A DNA MER1_type 15 75 -114 2144 125 0 0 chr5 189664337 189664649 -13420883 + AluSx SINE Alu 1 312 0 222 236 27 143 chr5 189664649 189664733 -13420799 + MER5A DNA MER1_type 75 167 -22 198 302 116 44 chr5 189665259 189665484 -13420048 + L2 LINE L2 3009 3249 -64 865 243 69 97 chr5 189665541 189666076 -13419456 - LTR33A LTR ERVL -1 522 3 789 211 77 38 chr5 189666146 189666527 -13419005 + MLT1C LTR MaLR 5 432 -35 2102 104 0 3 chr5 189667543 189667831 -13417701 + AluSq SINE Alu 5 291 -22 276 170 0 0 chr5 189667995 189668048 -13417484 + (CTATT)n Simple_repeat Simple_repeat 3 55 0 350 281 45 40 chr5 189668101 189668300 -13417232 + LTR67 LTR ERVL 97 296 -261 654 297 149 19 chr5 189668654 189668977 -13416555 - MLT1K LTR MaLR 0 588 224 812 300 13 1 chr5 189669544 189669780 -13415752 - MIR SINE MIR -5 257 16 555 255 52 20 chr5 189669776 189669929 -13415603 - MIR SINE MIR -64 198 41 * 2051 113 0 3 chr5 189669946 189670238 -13415294 + AluSx SINE Alu 1 291 -21 920 232 11 0 chr5 189670371 189670552 -13414980 + MER58A DNA MER1_type 39 221 -3 386 284 225 0 chr5 189671711 189671947 -13413585 - L1MC4a LINE L1 -1880 5928 5640 958 237 27 5 chr5 189671980 189672199 -13413333 - MER58A DNA MER1_type 0 224 1 548 299 82 0 chr5 189672327 189672511 -13413021 - MIR SINE MIR -63 199 1 262 245 11 11 chr5 189672990 189673084 -13412448 + GA-rich Low_complexity Low_complexity 4 97 0 23 0 0 0 chr5 189673570 189673593 -13411939 + AT_rich Low_complexity Low_complexity 1 23 0 188 247 13 78 chr5 189674976 189675053 -13410479 - L2 LINE L2 0 3272 3201 473 301 144 18 chr5 189675055 189675284 -13410248 - MIR SINE MIR 0 262 5 195 325 120 37 chr5 189675320 189675511 -13410021 - L2 LINE L2 -110 3162 2956 279 323 31 8 chr5 189675902 189676029 -13409503 + MIR SINE MIR 49 178 -84 414 296 159 57 chr5 189677131 189677673 -13407859 + L2 LINE L2 2625 3225 -47 306 207 224 0 chr5 189677790 189677906 -13407626 - Charlie8 DNA MER1_type -2152 265 124 1185 145 40 10 chr5 189677942 189678142 -13407390 + MER2 DNA MER2_type 1 206 -139 448 206 0 0 chr5 189678170 189678243 -13407289 + MER2 DNA MER2_type 267 339 -6 285 214 14 2 chr5 189678275 189678347 -13407185 - MLT2B1 LTR ERVL -46 469 304 597 273 14 0 chr5 189678347 189678490 -13407042 - MLT2B1 LTR ERVL -362 158 14 648 303 5 46 chr5 189678630 189678848 -13406684 - MIR SINE MIR -11 251 43 180 204 0 140 chr5 189679848 189679941 -13405591 - L3 LINE CR1 -896 681 602 2695 69 3 3 chr5 189681249 189681599 -13403933 - L1PA11 LINE L1 -213 5955 5606 1361 125 51 0 chr5 189681599 189681815 -13403717 + L1PA11 LINE L1 5948 6174 0 192 328 0 0 chr5 189681867 189681925 -13403607 - L2 LINE L2 -605 2709 2652 351 298 77 60 chr5 189683309 189683544 -13401988 + L2 LINE L2 2854 3092 -180 222 343 27 0 chr5 189683822 189683895 -13401637 + MIR SINE MIR 1 75 -187 451 304 9 0 chr5 189684371 189684483 -13401049 + L2 LINE L2 3200 3312 -1 673 240 1 28 chr5 189684527 189684708 -13400824 + MLT1E LTR MaLR 1 170 -397 1846 224 67 11 chr5 189684740 189685190 -13400342 + MLT1E LTR MaLR 119 593 0 797 98 0 0 chr5 189685637 189685739 -13399793 - AluSq/x SINE Alu -210 103 2 567 187 136 58 chr5 189685739 189685894 -13399638 + MER58B DNA MER1_type 171 337 -4 1778 154 164 20 chr5 189685908 189686316 -13399216 - MLT1C LTR MaLR 0 467 1 540 296 77 67 chr5 189686316 189686704 -13398828 + L2 LINE L2 2585 2976 -338 361 133 307 0 chr5 189686819 189686894 -13398638 + MLT1C LTR MaLR 370 467 0 571 186 128 73 chr5 189686908 189687062 -13398470 - MER58B DNA MER1_type -2083 337 193 1999 130 7 3 chr5 189687062 189687370 -13398162 + AluSq SINE Alu 1 309 -4 571 186 128 73 chr5 189687370 189687426 -13398106 - MER58B DNA MER1_type -2227 193 12 224 241 19 0 chr5 189687617 189687671 -13397861 + MIR3 SINE MIR 139 193 -15 290 320 31 47 chr5 189687908 189688036 -13397496 + MIR SINE MIR 34 159 -103 248 278 56 11 chr5 189688088 189688178 -13397354 + MIR SINE MIR 29 122 -140 1325 257 62 41 chr5 189688211 189688635 -13396897 + LTR33 LTR ERVL 25 462 -59 2475 179 21 31 chr5 189688635 189689149 -13396383 - L1MB3 LINE L1 -2 6181 5673 1325 257 62 41 chr5 189689149 189689211 -13396321 + LTR33 LTR ERVL 462 521 0 2077 126 0 0 chr5 189689238 189689547 -13395985 - AluSc SINE Alu 0 309 1 227 278 83 0 chr5 189689564 189689636 -13395896 + MIR SINE MIR 185 262 0 471 241 207 25 chr5 189689669 189689906 -13395626 + MLT1J1 LTR MaLR 40 319 -127 474 213 162 29 chr5 189689917 189690053 -13395479 - MIR SINE MIR -108 154 1 368 310 10 0 chr5 189691018 189691118 -13394414 - MIR SINE MIR -49 213 113 285 346 19 9 chr5 189691297 189691404 -13394128 - MIR SINE MIR -67 195 88 225 261 0 0 chr5 189691730 189691799 -13393733 + (TTA)n Simple_repeat Simple_repeat 2 70 0 800 206 0 7 chr5 189693624 189693779 -13391753 + FRAM SINE Alu 1 154 -22 22 0 0 0 chr5 189694474 189694496 -13391036 + AT_rich Low_complexity Low_complexity 1 22 0 261 243 54 14 chr5 189694523 189694597 -13390935 - MIR SINE MIR -6 256 180 1447 212 3 26 chr5 189695963 189696270 -13389262 + MLT1D LTR MaLR 206 505 0 432 320 34 17 chr5 189696569 189696747 -13388785 - MIR SINE MIR -81 181 1 7871 147 18 5 chr5 189698635 189699917 -13385615 + HSMAR2 DNA Mariner 2 1300 -2 441 263 59 53 chr5 189700000 189700152 -13385380 - MER91A DNA MER1_type -26 170 18 195 189 0 0 chr5 189700576 189700629 -13384903 + T-rich Low_complexity Low_complexity 1 53 0 2081 123 0 3 chr5 189700631 189700941 -13384591 - AluSc SINE Alu 0 309 1 21 0 0 0 chr5 189701787 189701808 -13383724 + AT_rich Low_complexity Low_complexity 1 21 0 263 191 15 0 chr5 189701891 189701959 -13383573 + GA-rich Low_complexity Low_complexity 2 70 0 251 277 181 32 chr5 189703229 189703323 -13382209 + L2 LINE L2 3206 3313 0 436 135 14 0 chr5 189703473 189703547 -13381985 + L1ME LINE L1 5590 5664 -457 25 0 0 0 chr5 189703663 189703688 -13381844 + AT_rich Low_complexity Low_complexity 1 25 0 373 243 39 68 chr5 189703821 189703924 -13381608 + L1MC4 LINE L1 6619 6718 -1324 1941 122 7 7 chr5 189704021 189704324 -13381208 - AluSq SINE Alu -10 303 1 1098 107 0 0 chr5 189704864 189705013 -13380519 + AluSq/x SINE Alu 1 149 -164 1466 227 0 0 chr5 189705421 189705716 -13379816 - AluSg SINE Alu -5 295 1 756 196 0 0 chr5 189705716 189705864 -13379668 + L1MD3 LINE L1 7846 7993 -2 308 330 28 0 chr5 189706005 189706111 -13379421 + MIR SINE MIR 83 191 -71 483 264 45 0 chr5 189706112 189706222 -13379310 + L2 LINE L2 3199 3313 0 390 263 101 78 chr5 189706328 189706561 -13378971 + L1ME3A LINE L1 5765 5947 -223 891 203 21 16 chr5 189706846 189707033 -13378499 + MER5A DNA MER1_type 1 188 -1 416 290 8 15 chr5 189707502 189707633 -13377899 + MLT1J LTR MaLR 287 416 -95 689 283 64 99 chr5 189709682 189710129 -13375403 + L2 LINE L2 2630 3047 -266 1518 56 0 10 chr5 189710129 189710325 -13375207 + L1PA6 LINE L1 5961 6154 0 689 283 64 99 chr5 189710325 189710567 -13374965 + L2 LINE L2 3047 3296 -17 296 273 12 2 chr5 189710573 189710657 -13374875 + MIR3 SINE MIR 76 160 -48 1959 127 0 19 chr5 189710664 189710971 -13374561 - AluSx SINE Alu -10 302 2 343 243 0 48 chr5 189711138 189711241 -13374291 - MER112 DNA MER1_type -133 127 30 204 292 0 56 chr5 189711282 189711354 -13374178 + MIR3 SINE MIR 134 201 -7 798 161 0 0 chr5 189712464 189712582 -13372950 - FLAM_C SINE Alu -15 118 1 294 29 0 0 chr5 189712862 189712897 -13372635 + (CA)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr5 189712896 189712917 -13372615 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 516 206 28 0 chr5 189713287 189713394 -13372138 + MER81 DNA DNA 1 110 -4 691 251 108 5 chr5 189713554 189713670 -13371862 + MIR SINE MIR 20 123 -139 1056 247 70 45 chr5 189713670 189714115 -13371417 + LTR16A1 LTR ERVL 2 457 0 691 251 108 5 chr5 189714115 189714201 -13371331 + MIR SINE MIR 123 243 -19 504 342 101 4 chr5 189714902 189715130 -13370402 - MIR SINE MIR -10 252 3 2007 101 9 55 chr5 189715744 189716071 -13369461 + AluSq SINE Alu 1 312 -1 1336 195 17 20 chr5 189716080 189716372 -13369160 + AluJb SINE Alu 1 291 -21 231 315 33 22 chr5 189716610 189716702 -13368830 + L2 LINE L2 2967 3059 -213 196 51 26 26 chr5 189716964 189717003 -13368529 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 2352 80 0 0 chr5 189717019 189717320 -13368212 + AluY SINE Alu 1 301 -10 2013 98 4 0 chr5 189717339 189717685 -13367847 + AluY SINE Alu 9 355 0 496 268 54 80 chr5 189718368 189718592 -13366940 + MLT1K LTR MaLR 190 407 -181 237 214 0 0 chr5 189718735 189718777 -13366755 - L2 LINE L2 -18 3254 3213 430 285 88 40 chr5 189718782 189719031 -13366501 - MIR SINE MIR 0 262 2 1846 122 34 7 chr5 189719078 189719374 -13366158 + AluSx SINE Alu 1 304 -8 452 336 58 72 chr5 189719720 189720137 -13365395 + L2 LINE L2 2862 3272 0 2024 116 0 10 chr5 189721327 189721620 -13363912 + AluSx SINE Alu 1 290 -22 773 238 0 33 chr5 189721663 189721844 -13363688 - MIR SINE MIR -74 188 14 924 208 61 10 chr5 189722411 189722608 -13362924 + MIR SINE MIR 56 262 0 1675 140 32 7 chr5 189722842 189723120 -13362412 - AluSc SINE Alu -24 285 1 511 319 111 14 chr5 189724459 189724675 -13360857 - MIR SINE MIR -1 261 25 427 281 202 15 chr5 189725439 189725642 -13359890 - MIR SINE MIR -11 251 11 279 54 0 0 chr5 189726068 189726105 -13359427 + (CA)n Simple_repeat Simple_repeat 1 37 0 535 284 117 15 chr5 189727373 189727570 -13357962 + MIR SINE MIR 2 218 -44 2195 73 42 0 chr5 189729532 189729820 -13355712 - AluY SINE Alu -11 300 1 378 282 117 82 chr5 189730118 189730324 -13355208 + MIR SINE MIR 48 260 -2 405 250 46 9 chr5 189731541 189731649 -13353883 - MER103 DNA DNA -52 114 3 8831 183 160 22 chr5 189732305 189734558 -13350974 + L1MDa LINE L1 18 2581 -3959 534 99 0 0 chr5 189734563 189734634 -13350898 + AluS SINE Alu 2 72 -241 1965 89 0 121 chr5 189734669 189735007 -13350525 + AluSp SINE Alu 5 301 -2 2232 89 0 3 chr5 189735056 189735360 -13350172 + AluY SINE Alu 1 303 -8 689 290 86 47 chr5 189735377 189735715 -13349817 + MLT1J LTR MaLR 158 508 -3 466 344 112 0 chr5 189735728 189735952 -13349580 - MIR SINE MIR -13 249 1 227 261 144 18 chr5 189736159 189736270 -13349262 - L2 LINE L2 -2 3270 3146 769 271 31 9 chr5 189737342 189737567 -13347965 + MIR SINE MIR 12 241 -21 317 312 94 56 chr5 189737537 189737752 -13347780 - MIR SINE MIR -8 254 32 * 559 203 158 6 chr5 189737756 189737914 -13347618 + MER5A DNA MER1_type 1 182 -7 221 297 39 10 chr5 189738255 189738376 -13347156 + MIR SINE MIR 84 237 -25 2002 104 0 0 chr5 189738603 189738873 -13346659 + AluSg SINE Alu 1 270 -40 409 306 105 29 chr5 189740470 189740679 -13344853 + MIR SINE MIR 30 254 -8 357 194 32 32 chr5 189741019 189741112 -13344420 - MIR SINE MIR -4 258 166 901 251 21 125 chr5 189741155 189741538 -13343994 + L2 LINE L2 2970 3312 -1 553 175 48 48 chr5 189741536 189741662 -13343870 - MIR SINE MIR -89 173 48 * 255 170 0 0 chr5 189742069 189742116 -13343416 + MIR SINE MIR 81 127 -81 1602 184 3 16 chr5 189742446 189742761 -13342771 + AluJo SINE Alu 1 311 -1 667 246 98 42 chr5 189742776 189742831 -13342701 - MIR SINE MIR -1 261 211 2391 62 3 10 chr5 189742831 189743138 -13342394 - AluY SINE Alu -6 305 1 667 246 98 42 chr5 189743138 189743297 -13342235 - MIR SINE MIR -51 211 35 404 261 61 91 chr5 189744034 189744298 -13341234 - MIR SINE MIR -3 259 4 256 210 62 74 chr5 189744562 189744643 -13340889 + MER91A DNA MER1_type 98 177 -19 454 293 122 42 chr5 189746107 189746370 -13339162 - Charlie8 DNA MER1_type -2132 285 2 200 405 0 0 chr5 189746763 189746837 -13338695 - MIR SINE MIR -21 241 168 581 228 13 25 chr5 189747971 189748129 -13337403 - MER103 DNA DNA -3 163 8 190 341 98 12 chr5 189748317 189748399 -13337133 - L2 LINE L2 -46 3226 3138 1841 122 4 4 chr5 189748562 189748840 -13336692 + AluSp SINE Alu 21 298 -15 353 327 19 19 chr5 189749433 189749592 -13335940 + MLT1K LTR MaLR 126 284 -304 256 270 191 26 chr5 189750050 189750202 -13335330 + MIR SINE MIR 59 235 -27 470 293 67 10 chr5 189750954 189751158 -13334374 + MIR SINE MIR 37 256 -6 342 337 53 24 chr5 189751858 189752027 -13333505 + MIR SINE MIR 20 193 -69 776 187 33 84 chr5 189752164 189752378 -13333154 - MER58A DNA MER1_type -13 211 9 386 277 10 0 chr5 189753887 189753988 -13331544 + MIR3 SINE MIR 96 197 -11 226 292 0 51 chr5 189754160 189754315 -13331217 + CT-rich Low_complexity Low_complexity 1 147 0 204 40 0 0 chr5 189754834 189754859 -13330673 + (T)n Simple_repeat Simple_repeat 1 25 0 210 192 0 0 chr5 189755220 189755272 -13330260 + (TG)n Simple_repeat Simple_repeat 1 52 0 1180 299 88 35 chr5 189755407 189756164 -13329368 - L2 LINE L2 0 3313 2520 2325 68 0 7 chr5 189757023 189757319 -13328213 + AluSc SINE Alu 1 294 -15 258 262 135 40 chr5 189759944 189760070 -13325462 + MIR SINE MIR 119 256 -6 326 337 21 27 chr5 189760112 189760299 -13325233 + MER5A DNA MER1_type 1 186 -3 444 238 217 0 chr5 189760324 189760467 -13325065 + MER5A DNA MER1_type 16 189 0 677 271 39 9 chr5 189761400 189761629 -13323903 + MIR SINE MIR 1 236 -26 1841 188 19 27 chr5 189761682 189762055 -13323477 + MLT1B LTR MaLR 21 390 0 263 320 109 8 chr5 189762057 189762185 -13323347 - MIR SINE MIR -102 160 20 2359 87 3 0 chr5 189762675 189762973 -13322559 - AluSc SINE Alu -9 300 2 2067 139 10 0 chr5 189763108 189763417 -13322115 - AluSx SINE Alu 0 312 1 1891 159 0 3 chr5 189763527 189763822 -13321710 - AluSx SINE Alu -18 294 1 328 287 0 10 chr5 189764034 189764135 -13321397 - MIR SINE MIR -85 123 24 406 256 49 30 chr5 189764260 189764424 -13321108 - MIR SINE MIR -8 254 88 185 324 179 28 chr5 189764927 189765072 -13320460 + MIR SINE MIR 56 222 -40 468 0 0 0 chr5 189765091 189765143 -13320389 + (TA)n Simple_repeat Simple_repeat 2 53 0 751 245 14 57 chr5 189765236 189765448 -13320084 + MIR SINE MIR 27 229 -33 483 256 6 79 chr5 189765896 189766060 -13319472 + MLT1K LTR MaLR 412 563 -25 201 121 0 0 chr5 189766703 189766736 -13318796 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 297 0 0 0 chr5 189767987 189768020 -13317512 + (TG)n Simple_repeat Simple_repeat 2 34 0 186 43 0 0 chr5 189769186 189769209 -13316323 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 347 333 17 23 chr5 189769326 189769503 -13316029 - MER117 DNA MER1_type -8 189 14 2420 90 0 10 chr5 189769515 189769826 -13315706 + AluSc SINE Alu 1 308 -1 889 199 100 8 chr5 189769993 189770244 -13315288 + ORSL DNA AcHobo 2 275 0 2105 129 3 0 chr5 189771092 189771386 -13314146 - AluSx SINE Alu -17 295 1 1057 161 17 68 chr5 189771429 189771665 -13313867 - L1MB2 LINE L1 -7 6164 5941 246 242 30 0 chr5 189771899 189771965 -13313567 + MIR SINE MIR 77 144 -118 502 303 13 0 chr5 189772125 189772280 -13313252 - MIR SINE MIR -99 163 7 373 232 14 0 chr5 189773537 189773679 -13311853 + (TCCA)n Simple_repeat Simple_repeat 4 147 0 401 367 66 19 chr5 189773710 189773966 -13311566 - L2 LINE L2 -67 3205 2938 253 256 34 60 chr5 189774091 189774208 -13311324 - L2 LINE L2 -508 2806 2693 2128 120 0 0 chr5 189774212 189774515 -13311017 + AluSg SINE Alu 1 303 0 345 247 0 0 chr5 189774518 189774615 -13310917 + (CA)n Simple_repeat Simple_repeat 2 98 0 630 254 60 23 chr5 189775116 189775333 -13310199 - MIR SINE MIR -28 234 10 221 294 98 0 chr5 189776976 189777068 -13308464 + MIR SINE MIR 160 260 -2 286 160 2 15 chr5 189777174 189777240 -13308292 - MLT1J2 LTR MaLR -29 421 351 451 164 136 50 chr5 189777296 189777436 -13308096 - MLT1J LTR MaLR -254 257 106 1446 188 68 4 chr5 189777518 189777816 -13307716 + AluJb SINE Alu 1 315 0 589 329 73 5 chr5 189777879 189778098 -13307434 - MIR SINE MIR -27 235 2 234 0 0 0 chr5 189778903 189778929 -13306603 + (CA)n Simple_repeat Simple_repeat 1 26 0 190 265 0 0 chr5 189779154 189779203 -13306329 + L2 LINE L2 2928 2976 -337 3033 284 111 20 chr5 189779207 189780737 -13304795 - L2 LINE L2 -730 2584 917 278 317 106 28 chr5 189780735 189780877 -13304655 + MIR3 SINE MIR 20 172 -36 * 295 194 139 0 chr5 189780934 189781006 -13304526 + MIR SINE MIR 81 162 -100 352 175 206 10 chr5 189781013 189781110 -13304422 + L2 LINE L2 3187 3302 -11 246 136 0 0 chr5 189781110 189781154 -13304378 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 489 76 0 0 chr5 189782899 189782965 -13302567 + (CA)n Simple_repeat Simple_repeat 2 67 0 626 169 14 56 chr5 189783241 189783383 -13302149 + MLT1A1 LTR MaLR 1 136 -229 6649 74 5 27 chr5 189783897 189785423 -13300109 - L1PA7 LINE L1 -4 6150 4636 538 162 114 6 chr5 189785423 189785590 -13299942 + L1P LINE L1 4375 4559 -1587 4188 65 21 35 chr5 189785724 189786556 -13298976 - L1P3 LINE L1 -580 5574 4763 3416 87 71 4 chr5 189786546 189787053 -13298479 + L1P3 LINE L1 4200 4740 -1406 * 862 252 93 20 chr5 189787055 189787357 -13298175 + L2 LINE L2 2990 3313 0 363 317 84 0 chr5 189787566 189787733 -13297799 + MIR SINE MIR 66 246 -16 450 319 144 30 chr5 189788406 189788878 -13296654 + L2 LINE L2 2524 3046 -226 1117 236 5 0 chr5 189788976 189789188 -13296344 - MER58A DNA MER1_type -11 213 1 220 206 38 153 chr5 189789428 189789559 -13295973 - MIR SINE MIR -41 221 106 198 0 0 0 chr5 189790652 189790674 -13294858 + (A)n Simple_repeat Simple_repeat 1 22 0 219 336 71 9 chr5 189791111 189791224 -13294308 + L2 LINE L2 3192 3311 -2 378 265 20 0 chr5 189791912 189792014 -13293518 + MER5A DNA MER1_type 9 112 -77 546 295 40 13 chr5 189792059 189792286 -13293246 + MIR SINE MIR 13 245 -17 442 291 29 29 chr5 189792826 189792998 -13292534 - MIR SINE MIR -34 228 57 1730 166 32 11 chr5 189798094 189798402 -13287130 - AluJb SINE Alu 0 312 1 23 0 0 53 chr5 189798408 189798427 -13287105 + AT_rich Low_complexity Low_complexity 1 19 -17 1784 161 17 0 chr5 189798427 189798718 -13286814 - AluSx SINE Alu -16 296 1 23 0 0 53 chr5 189798718 189798736 -13286796 + AT_rich Low_complexity Low_complexity 19 36 0 199 267 0 0 chr5 189798846 189798891 -13286641 - L2 LINE L2 -8 3305 3261 363 304 89 60 chr5 189799177 189799762 -13285770 - L2 LINE L2 -11 3261 2565 402 276 45 0 chr5 189800270 189800404 -13285128 + MIR SINE MIR 123 262 0 517 286 105 19 chr5 189801049 189801134 -13284398 - MIR SINE MIR -19 243 167 419 92 0 184 chr5 189801134 189801176 -13284356 + MADE1 DNA Mariner 1 17 -63 1971 121 18 3 chr5 189801176 189801458 -13284074 - AluSx SINE Alu -24 288 3 419 92 0 184 chr5 189801458 189801513 -13284019 + MADE1 DNA Mariner 17 80 0 517 286 105 19 chr5 189801513 189801637 -13283895 - MIR SINE MIR -95 167 16 237 83 0 0 chr5 189802814 189802850 -13282682 + (GA)n Simple_repeat Simple_repeat 1 36 0 252 0 0 0 chr5 189803377 189803405 -13282127 + (TC)n Simple_repeat Simple_repeat 1 28 0 242 274 78 72 chr5 189803936 189804089 -13281443 - MIR SINE MIR -106 156 3 195 325 48 0 chr5 189804377 189804460 -13281072 + MIR3 SINE MIR 98 184 -24 241 277 43 0 chr5 189804626 189804720 -13280812 - L1MC4 LINE L1 -19 8023 7926 768 179 30 8 chr5 189804746 189804880 -13280652 + MER6A DNA MER2_type 1 137 -468 2810 238 162 37 chr5 189804948 189805973 -13279559 - L1ME3A LINE L1 -4 6166 5270 2203 121 0 0 chr5 189805973 189806262 -13279270 - AluSx SINE Alu -23 289 1 2810 238 162 37 chr5 189806262 189806773 -13278759 - L1ME3A LINE L1 -900 5270 4824 2317 84 3 0 chr5 189806773 189807059 -13278473 - AluSc SINE Alu -22 287 1 2810 238 162 37 chr5 189807059 189807213 -13278319 - L1ME3A LINE L1 -1346 4824 4259 823 67 28 196 chr5 189807211 189807390 -13278142 + L1PA10 LINE L1 6020 6168 0 * 700 282 105 9 chr5 189807535 189807858 -13277674 - L1ME3A LINE L1 -1957 4189 3836 1918 132 17 14 chr5 189808149 189808444 -13277088 - AluSx SINE Alu -16 296 1 4526 216 121 32 chr5 189809129 189810793 -13274739 - L1MC3 LINE L1 -11 7843 6033 1735 255 82 74 chr5 189810768 189814379 -13271153 - L1MC3 LINE L1 -746 5469 1925 * 240 375 0 0 chr5 189814644 189814732 -13270800 + MIR SINE MIR 149 236 -26 1017 218 79 0 chr5 189814736 189814938 -13270594 - MER20 DNA MER1_type 0 219 2 210 318 88 88 chr5 189814962 189815223 -13270309 - L2 LINE L2 -9 3263 3003 1247 248 77 37 chr5 189815679 189816107 -13269425 + MLT1J2 LTR MaLR 6 450 0 443 293 122 19 chr5 189816327 189816532 -13269000 + MIR SINE MIR 20 245 -17 216 0 0 0 chr5 189817978 189818002 -13267530 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 392 290 94 14 chr5 189819195 189819333 -13266199 + L2 LINE L2 3123 3271 -1 372 224 163 77 chr5 189819395 189819641 -13265891 + MER102a DNA MER1_type 38 304 -26 189 293 81 73 chr5 189819643 189819766 -13265766 - MIR SINE MIR -56 152 29 * 347 304 36 67 chr5 189819759 189819986 -13265546 + MIR SINE MIR 29 252 -10 2343 107 0 10 chr5 189819986 189820296 -13265236 + AluSg SINE Alu 1 307 -3 2137 102 46 0 chr5 189820296 189820580 -13264952 + AluSg SINE Alu 1 297 -13 1102 240 128 60 chr5 189820953 189821012 -13264520 + LTR33 LTR ERVL 42 96 -425 1029 135 259 108 chr5 189821012 189821271 -13264261 - AluJo SINE Alu -4 298 1 1102 240 128 60 chr5 189821271 189821657 -13263875 + LTR33 LTR ERVL 96 517 -4 21 0 0 0 chr5 189822940 189822961 -13262571 + AT_rich Low_complexity Low_complexity 1 21 0 351 291 35 35 chr5 189823418 189823559 -13261973 + MIR SINE MIR 24 164 -98 371 321 28 9 chr5 189823760 189823869 -13261663 - MIR SINE MIR -58 150 40 527 328 54 10 chr5 189825018 189825222 -13260310 + MLT1K LTR MaLR 19 231 -357 423 221 7 101 chr5 189825322 189825471 -13260061 + MLT1K LTR MaLR 448 582 -6 21 0 0 0 chr5 189826197 189826218 -13259314 + AT_rich Low_complexity Low_complexity 1 21 0 550 302 95 13 chr5 189826786 189827018 -13258514 + MIR SINE MIR 12 262 0 204 274 106 35 chr5 189827378 189827491 -13258041 + MIR3 SINE MIR 1 121 -87 585 261 100 96 chr5 189827792 189828290 -13257242 + MLT1H1 LTR MaLR 1 500 -67 6889 116 73 38 chr5 189828290 189828948 -13256584 + Tigger3b DNA MER2_type 1 634 -2394 2444 52 0 7 chr5 189828948 189829239 -13256293 + AluY SINE Alu 1 289 -22 6889 116 73 38 chr5 189829239 189829512 -13256020 + Tigger3b DNA MER2_type 634 896 -2132 773 206 0 22 chr5 189829512 189829648 -13255884 + FLAM_A SINE Alu 1 133 0 6889 116 73 38 chr5 189829648 189829904 -13255628 + Tigger3b DNA MER2_type 896 1231 0 232 276 0 0 chr5 189829921 189829979 -13255553 + MLT1H1 LTR MaLR 538 595 0 270 156 0 0 chr5 189881044 189881089 -13204443 + L1MA9 LINE L1 6064 6108 -204 9590 161 140 6 chr5 189881099 189883086 -13202446 + L1PBa LINE L1 6 2318 -4545 230 113 278 0 chr5 189883225 189883340 -13202192 - L1PB3 LINE L1 -206 6650 6504 7262 161 25 29 chr5 189883448 189883775 -13201757 - L1PB3 LINE L1 -366 6490 6163 6668 89 32 0 chr5 189883775 189883932 -13201600 + L1PA10 LINE L1 5080 5231 -937 2365 87 0 0 chr5 189883932 189884232 -13201300 + AluY SINE Alu 1 300 -11 6668 89 32 0 chr5 189884232 189885147 -13200385 + L1PA10 LINE L1 5231 6168 0 7262 161 25 29 chr5 189885147 189886713 -13198819 - L1PB3 LINE L1 -693 6163 4610 395 248 140 116 chr5 189886817 189887483 -13198049 - L1PB3 LINE L1 -5480 1369 443 228 232 71 0 chr5 189887794 189887850 -13197682 - MIR SINE MIR -79 129 70 353 341 0 0 chr5 189888519 189888657 -13196875 + (CA)n Simple_repeat Simple_repeat 1 138 0 222 136 0 0 chr5 189888857 189888901 -13196631 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 218 18 0 chr5 189889484 189889539 -13195993 - MIR3 SINE MIR -4 204 149 2268 194 17 104 chr5 189889708 189890421 -13195111 + L1ME1 LINE L1 5511 6161 -5 7533 238 45 30 chr5 189890426 189890652 -13194880 + L1ME1 LINE L1 1847 2068 -4147 180 77 0 0 chr5 189890652 189890678 -13194854 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 7533 238 45 30 chr5 189890678 189891506 -13194026 + L1ME1 LINE L1 2068 2882 -3333 1992 14 0 0 chr5 189891506 189891724 -13193808 + AluYa5 SINE Alu 86 303 -8 7533 238 45 30 chr5 189891724 189893148 -13192384 + L1ME1 LINE L1 2882 4334 -1881 1847 169 39 9 chr5 189893148 189893485 -13192047 + L1PB4 LINE L1 5807 6153 -3 7533 238 45 30 chr5 189893485 189893795 -13191737 + L1ME1 LINE L1 4334 4638 -1577 4721 193 15 24 chr5 189893952 189895043 -13190489 + L1MA9 LINE L1 5203 6282 -30 3109 236 66 15 chr5 189895075 189895959 -13189573 + L1ME1 LINE L1 4875 5847 -388 2083 110 3 20 chr5 189895959 189896258 -13189274 + AluSg SINE Alu 1 294 -16 3109 236 66 15 chr5 189896258 189896663 -13188869 + L1ME1 LINE L1 5847 6230 -5 400 318 78 0 chr5 189897696 189897850 -13187682 - MIR SINE MIR -72 190 25 369 317 21 7 chr5 189898186 189898331 -13187201 - MER117 DNA MER1_type -50 147 1 272 274 36 24 chr5 189898611 189898695 -13186837 + MER5B DNA MER1_type 6 90 -88 513 260 122 21 chr5 189898722 189899010 -13186522 + L1ME3A LINE L1 5621 5937 -233 252 257 88 60 chr5 189899433 189899682 -13185850 + L1ME4a LINE L1 5692 5947 -174 393 191 61 26 chr5 189900141 189900256 -13185276 + LTR33 LTR ERVL 403 521 0 2265 114 0 13 chr5 189900500 189900816 -13184716 - AluSx SINE Alu 0 312 1 2495 121 13 26 chr5 189901005 189901385 -13184147 + THE1C LTR MaLR 1 375 0 352 217 62 39 chr5 189901531 189901660 -13183872 + MLT1K LTR MaLR 197 328 -260 311 203 17 0 chr5 189902851 189902910 -13182622 - MIR SINE MIR -33 229 170 1059 269 111 21 chr5 189902926 189903305 -13182227 + MLT1J2 LTR MaLR 1 413 -37 486 229 36 21 chr5 189903635 189903775 -13181757 - MER103 DNA DNA -3 163 22 354 337 11 70 chr5 189903814 189904001 -13181531 - MIR3 SINE MIR -28 180 5 258 136 0 0 chr5 189905433 189905477 -13180055 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 309 267 0 33 chr5 189905681 189905771 -13179761 + LTR33 LTR ERVL 24 110 -411 586 296 75 0 chr5 189905821 189906020 -13179512 + LTR33 LTR ERVL 203 416 -105 2033 109 0 0 chr5 189906020 189906295 -13179237 - AluSg1 SINE Alu 0 309 35 1055 304 61 12 chr5 189906418 189906842 -13178690 - LTR16B LTR ERVL -15 449 5 246 67 0 0 chr5 189906978 189907008 -13178524 - tRNA-His-CAC tRNA tRNA -39 36 7 209 297 0 16 chr5 189907346 189907410 -13178122 - L2 LINE L2 0 3272 3210 411 341 85 26 chr5 189907729 189907999 -13177533 - L2 LINE L2 -4 3268 2983 970 264 55 55 chr5 189908127 189908585 -13176947 + MLT1K LTR MaLR 126 583 -5 1997 103 0 0 chr5 189908961 189909224 -13176308 + AluY SINE Alu 39 301 -10 459 239 21 84 chr5 189909801 189909943 -13175589 + MIR3 SINE MIR 13 145 -63 269 291 0 0 chr5 189910002 189910081 -13175451 - MER103 DNA DNA -77 89 11 320 304 43 0 chr5 189910210 189910302 -13175230 + LTR67 LTR ERVL 92 187 -370 290 260 200 27 chr5 189911329 189911479 -13174053 + MER5B DNA MER1_type 3 178 0 294 308 280 0 chr5 189913272 189913415 -13172117 + MER5A DNA MER1_type 7 189 0 477 335 60 5 chr5 189913733 189913948 -13171584 + L2 LINE L2 2731 2957 -357 1702 136 82 119 chr5 189913952 189914304 -13171228 + Charlie3 DNA MER1_type 1 2712 0 1271 198 69 3 chr5 189914304 189914668 -13170864 + L1M4 LINE L1 5171 5549 -635 286 302 12 0 chr5 189914840 189914926 -13170606 - MIR SINE MIR -79 129 43 245 234 201 52 chr5 189915109 189915263 -13170269 - MIR SINE MIR -58 204 28 612 115 0 0 chr5 189916078 189916165 -13169367 + AluJ/FLAM SINE Alu 1 87 -225 324 224 15 0 chr5 189917687 189917754 -13167778 + L2 LINE L2 3205 3272 0 348 271 16 112 chr5 189918340 189918591 -13166941 + MIR SINE MIR 8 234 -28 205 271 141 12 chr5 189918625 189918710 -13166822 + MIR SINE MIR 125 220 -42 3838 155 2 3 chr5 189918711 189919312 -13166220 + MER7C DNA MER2_type 1 600 -2 1725 170 24 0 chr5 189920641 189920930 -13164602 + MER58B DNA MER1_type 1 296 -45 524 278 41 69 chr5 189921058 189921303 -13164229 + MIR SINE MIR 8 245 -17 282 188 0 0 chr5 189922707 189922755 -13162777 + Charlie8 DNA MER1_type 1366 1413 -1004 941 160 29 11 chr5 189923789 189923964 -13161568 + MER5B DNA MER1_type 1 178 0 933 151 23 0 chr5 189924239 189924411 -13161121 + MER5A DNA MER1_type 13 188 -1 345 307 30 35 chr5 189924491 189924693 -13160839 + MIR SINE MIR 50 250 -12 623 302 71 4 chr5 189924961 189925186 -13160346 + MIR SINE MIR 15 254 -8 221 338 131 28 chr5 189925395 189925540 -13159992 - MIR SINE MIR -83 179 20 2361 118 26 9 chr5 189925678 189926027 -13159505 - THE1A LTR MaLR 0 355 1 217 222 0 0 chr5 189926152 189926197 -13159335 + (TG)n Simple_repeat Simple_repeat 1 45 0 3782 137 24 59 chr5 189927085 189927404 -13158128 - L1MB4 LINE L1 -12 6168 5839 1947 154 3 25 chr5 189927404 189927723 -13157809 - AluJb SINE Alu 0 312 1 3782 137 24 59 chr5 189927723 189928148 -13157384 - L1MB4 LINE L1 -341 5839 5450 342 263 211 16 chr5 189928559 189928749 -13156783 + MIR SINE MIR 36 262 0 322 272 18 11 chr5 189929748 189929870 -13155662 + MIR SINE MIR 59 145 -63 273 307 50 0 chr5 189930054 189930155 -13155377 - Charlie8 DNA MER1_type -2216 201 96 2026 96 37 0 chr5 189930175 189930446 -13155086 + AluSc SINE Alu 1 281 -28 970 173 77 24 chr5 189930818 189931026 -13154506 + MER20 DNA MER1_type 1 219 0 250 252 75 19 chr5 189931286 189931393 -13154139 - MIR SINE MIR -76 132 20 667 202 24 18 chr5 189931821 189931989 -13153543 + MER5B DNA MER1_type 7 175 -3 382 306 27 27 chr5 189932001 189932148 -13153384 - MIR SINE MIR -110 152 6 530 262 127 5 chr5 189933494 189933715 -13151817 - MIR SINE MIR -12 250 3 1724 170 3 23 chr5 189933882 189934182 -13151350 - AluJb SINE Alu -16 296 3 2221 231 53 16 chr5 189934422 189934984 -13150548 + MLT1G LTR MaLR 1 583 -7 327 223 21 32 chr5 189935001 189935095 -13150437 - MIR SINE MIR -20 242 150 613 240 71 33 chr5 189935464 189935647 -13149885 - MIR3 SINE MIR -15 193 4 2341 87 0 0 chr5 189939258 189939544 -13145988 + AluSg SINE Alu 1 286 -24 544 125 0 0 chr5 189939583 189939663 -13145869 - MADE1 DNA Mariner 0 80 1 958 279 124 29 chr5 189939691 189940175 -13145357 - MLT1F LTR MaLR -12 530 1 186 287 69 30 chr5 189940747 189940848 -13144684 - MIR3 SINE MIR -5 203 99 350 261 25 8 chr5 189942047 189942166 -13143366 + MIR SINE MIR 20 140 -122 234 0 0 0 chr5 189943607 189943633 -13141899 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1616 218 28 42 chr5 189943919 189944350 -13141182 - MLT1C LTR MaLR -1 466 42 557 163 0 101 chr5 189944572 189944701 -13140831 - FRAM SINE Alu -39 137 22 237 65 0 0 chr5 189944747 189944778 -13140754 + (TG)n Simple_repeat Simple_repeat 2 32 0 4233 134 49 9 chr5 189945572 189946500 -13139032 + L1MA5 LINE L1 5237 6299 -1 206 274 48 48 chr5 189947162 189947286 -13138246 + MIR SINE MIR 126 249 -13 312 327 42 18 chr5 189947356 189947524 -13138008 + L2 LINE L2 2932 3103 -169 250 336 29 19 chr5 189948452 189948556 -13136976 + L2 LINE L2 3001 3105 -167 1449 251 68 84 chr5 189949280 189949982 -13135550 - L1ME3A LINE L1 -13 6226 5536 2196 131 0 3 chr5 189949988 189950301 -13135231 - AluSx SINE Alu 0 312 1 912 273 80 7 chr5 189950305 189950744 -13134788 - L1ME3A LINE L1 -1375 4840 4370 346 294 0 17 chr5 189950803 189950922 -13134610 - L1ME3A LINE L1 -4653 1743 1627 * 406 225 41 30 chr5 189950916 189951085 -13134447 - L1MC5 LINE L1 -367 7594 7424 206 198 271 0 chr5 189952754 189952850 -13132682 + MIR SINE MIR 125 246 -16 4796 76 3 8 chr5 189952881 189953526 -13132006 + L1PA13 LINE L1 5335 5976 -187 694 303 25 12 chr5 189954275 189954516 -13131016 - MIR SINE MIR -11 251 8 199 291 218 0 chr5 189955263 189955373 -13130159 - L2 LINE L2 0 3313 3180 674 351 94 11 chr5 189955399 189955951 -13129581 + L2 LINE L2 2121 2718 -596 284 247 59 12 chr5 189956557 189956642 -13128890 - MER5B DNA MER1_type -28 150 62 528 317 94 5 chr5 189957375 189957599 -13127933 + MIR SINE MIR 15 258 -4 1940 149 3 7 chr5 189958389 189958685 -13126847 + AluJb SINE Alu 1 295 -17 293 353 59 0 chr5 189958800 189958936 -13126596 - MIR SINE MIR -72 190 47 218 239 0 0 chr5 189959018 189959064 -13126468 + L2 LINE L2 3268 3313 0 4145 192 49 10 chr5 189959587 189960403 -13125129 + Charlie1a DNA MER1_type 1 848 -607 658 117 19 0 chr5 189960403 189960506 -13125026 + L1PA10 LINE L1 6063 6167 -1 639 305 85 12 chr5 189960709 189960968 -13124564 + L1MC/D LINE L1 5380 5657 -2151 245 150 0 0 chr5 189961050 189961090 -13124442 + Charlie1a DNA MER1_type 855 894 -561 4871 51 0 2 chr5 189961121 189961713 -13123819 - L1PA6 LINE L1 -1 6153 5563 463 231 17 0 chr5 189961608 189961725 -13123807 - L1M3 LINE L1 -667 5667 5549 5223 67 18 17 chr5 189961854 189962803 -13122729 - L1PA7 LINE L1 -161 5993 5045 2315 171 45 27 chr5 189962803 189963365 -13122167 + Charlie1a DNA MER1_type 884 1455 0 459 246 159 7 chr5 189964412 189964550 -13120982 + MIR SINE MIR 2 160 -102 574 310 81 16 chr5 189964769 189965027 -13120505 - L3 LINE CR1 -520 1057 783 727 95 25 160 chr5 189965037 189965237 -13120295 - L1MA9 LINE L1 -47 6265 6093 5994 161 10 9 chr5 189965284 189966822 -13118710 - L1PB1 LINE L1 -1 6150 4615 197 83 28 0 chr5 189966822 189966858 -13118674 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2131 116 0 0 chr5 189966861 189967138 -13118394 - AluSc SINE Alu -32 277 1 5994 161 10 9 chr5 189967138 189967794 -13117738 - L1PB1 LINE L1 -1537 4614 3956 685 100 111 22 chr5 189967795 189967975 -13117557 - L1PA7 LINE L1 -6 6148 5953 551 287 112 19 chr5 189968147 189968405 -13117127 + L2 LINE L2 3032 3313 0 233 364 97 44 chr5 189968808 189969036 -13116496 - L2 LINE L2 -213 3059 2820 273 264 66 8 chr5 189969603 189969724 -13115808 + Charlie8 DNA MER1_type 38 165 -2252 850 246 12 71 chr5 189970563 189970815 -13114717 - MIR SINE MIR -24 238 2 2270 108 3 0 chr5 189970951 189971256 -13114276 - AluSx SINE Alu -6 306 1 222 175 25 13 chr5 189971589 189971638 -13113894 + MIR3 SINE MIR 108 159 -49 875 129 134 0 chr5 189971873 189971929 -13113603 + L1MA9 LINE L1 6093 6140 -172 258 32 0 0 chr5 189971929 189971960 -13113572 + (CA)n Simple_repeat Simple_repeat 2 32 0 875 129 134 0 chr5 189971960 189972097 -13113435 + L1MA9 LINE L1 6140 6312 0 1951 117 43 0 chr5 189972292 189972573 -13112959 + AluSx SINE Alu 1 293 -19 591 239 51 0 chr5 189972607 189972745 -13112787 + L1MD2 LINE L1 6000 6144 -215 794 176 78 16 chr5 189972784 189972977 -13112555 + L1MD2 LINE L1 6139 6343 -16 1828 135 33 26 chr5 189973666 189973969 -13111563 + AluSq SINE Alu 1 305 -8 29 0 0 0 chr5 189974147 189974176 -13111356 + AT_rich Low_complexity Low_complexity 1 29 0 416 307 141 46 chr5 189974324 189974818 -13110714 - L2 LINE L2 0 3272 2723 465 202 59 0 chr5 189975028 189975147 -13110385 - MER104 DNA Tc2 -51 129 4 259 299 163 27 chr5 189975210 189975357 -13110175 + MIR3 SINE MIR 20 186 -22 823 145 87 6 chr5 189975615 189975787 -13109745 + MLT1C LTR MaLR 1 186 -281 7695 165 13 67 chr5 189975805 189976533 -13108999 + L1PB4 LINE L1 3513 4279 -1877 1629 180 26 23 chr5 189976533 189976839 -13108693 + AluJo SINE Alu 1 307 -5 7695 165 13 67 chr5 189976839 189978919 -13106613 + L1PB4 LINE L1 4279 6154 -2 2196 101 0 16 chr5 189978921 189979257 -13106275 + AluSc SINE Alu 1 309 0 616 220 28 28 chr5 189979422 189979563 -13105969 + MIR SINE MIR 51 191 -71 825 257 14 19 chr5 189979580 189979790 -13105742 - MIR SINE MIR -1 261 53 1276 143 91 56 chr5 189979790 189980077 -13105455 + MLT1C LTR MaLR 171 467 0 2061 120 3 13 chr5 189980101 189980400 -13105132 + AluSx SINE Alu 1 296 -16 211 296 143 20 chr5 189980816 189980914 -13104618 - MER5A DNA MER1_type -69 120 11 585 198 140 6 chr5 189980996 189981153 -13104379 - MER5B DNA MER1_type 0 178 1 467 289 26 37 chr5 189981160 189981350 -13104182 + MIR SINE MIR 72 259 -3 190 280 0 20 chr5 189981588 189981638 -13103894 + MIR3 SINE MIR 9 57 -151 3814 211 21 31 chr5 189981660 189982437 -13103095 - L1M4 LINE L1 -1275 4871 4106 2047 137 3 13 chr5 189982437 189982744 -13102788 + AluSx SINE Alu 1 304 -8 3814 211 21 31 chr5 189982744 189983034 -13102498 - L1M4 LINE L1 -2040 4106 3815 1702 219 97 21 chr5 189983077 189983786 -13101746 - L1MC5 LINE L1 -44 7917 7155 490 336 52 62 chr5 189984286 189984944 -13100588 + L2 LINE L2 2193 2843 -471 318 217 43 0 chr5 189985172 189985241 -13100291 + L2 LINE L2 3234 3305 -8 241 338 211 19 chr5 189985805 189986018 -13099514 + L3 LINE CR1 141 394 -1183 247 339 115 6 chr5 189986305 189986479 -13099053 - MIR SINE MIR -64 198 6 465 279 1 0 chr5 189987440 189987551 -13097981 + MIR SINE MIR 35 146 -62 218 235 184 10 chr5 189987685 189987783 -13097749 - L3 LINE CR1 -117 1460 1346 258 32 0 0 chr5 189988542 189988573 -13096959 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 399 254 26 26 chr5 189988573 189988687 -13096845 - L2 LINE L2 -14 3299 3186 557 309 17 0 chr5 189988806 189988987 -13096545 - Charlie8 DNA MER1_type -2142 275 92 256 328 49 62 chr5 189989085 189989235 -13096297 + MIR SINE MIR 3 149 -67 1119 264 97 28 chr5 189989258 189989723 -13095809 - LTR33 LTR ERVL -9 512 16 696 182 8 0 chr5 189990552 189990684 -13094848 - MER105 DNA DNA -56 148 16 758 306 31 37 chr5 189990699 189991023 -13094509 - MLT1I LTR MaLR -48 361 40 454 319 39 58 chr5 189991083 189991343 -13094189 + L1ME4a LINE L1 5648 5902 -219 22 0 0 0 chr5 189991346 189991368 -13094164 + AT_rich Low_complexity Low_complexity 1 22 0 394 255 91 5 chr5 189991536 189991744 -13093788 + L1MC4a LINE L1 5691 5916 -1892 21 57 0 0 chr5 189991943 189991978 -13093554 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr5 189992731 189992758 -13092774 + AT_rich Low_complexity Low_complexity 1 27 0 368 323 73 18 chr5 189993030 189993194 -13092338 + L1ME4a LINE L1 5729 5901 -220 246 307 0 53 chr5 189993201 189993276 -13092256 + L2 LINE L2 3225 3295 -18 285 279 0 0 chr5 189993324 189993403 -13092129 + L1ME4a LINE L1 5965 6043 -78 335 193 0 0 chr5 189993404 189993461 -13092071 + MER5B DNA MER1_type 122 178 0 284 281 71 55 chr5 189993487 189993759 -13091773 - MIR SINE MIR -36 172 9 531 282 39 6 chr5 189995402 189995558 -13089974 + MIR SINE MIR 30 190 -72 875 233 68 13 chr5 189995949 189996342 -13089190 - L1ME4a LINE L1 -115 6006 5579 2312 130 57 43 chr5 189996658 189997081 -13088451 - MSTB1 LTR MaLR -3 429 1 189 0 0 0 chr5 189997622 189997643 -13087889 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 188 222 0 0 chr5 189997651 189997687 -13087845 - L2 LINE L2 -9 3263 3228 459 294 0 20 chr5 189997923 189998069 -13087463 + MIR3 SINE MIR 18 160 -48 2083 136 0 3 chr5 189998193 189998488 -13087044 + AluSq SINE Alu 3 296 -17 1752 187 68 52 chr5 189998492 189998989 -13086543 + MLT1D LTR MaLR 1 505 0 411 293 78 11 chr5 189999498 189999689 -13085843 + MIR SINE MIR 47 250 -12 362 125 29 10 chr5 189999754 189999858 -13085674 + (TA)n Simple_repeat Simple_repeat 2 107 0 279 329 41 86 chr5 189999897 190000140 -13085392 - L2 LINE L2 -112 3160 2929 1522 192 4 18 chr5 190000540 190000821 -13084711 + AluJo SINE Alu 5 281 -31 194 81 27 0 chr5 190000827 190000864 -13084668 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 207 403 67 20 chr5 190000997 190001146 -13084386 + L2 LINE L2 2868 3023 -249 2487 227 31 90 chr5 190001761 190002835 -13082697 - MER63D DNA MER1_type -51 1010 1 352 257 18 0 chr5 190004036 190004145 -13081387 + MER103 DNA DNA 1 111 -55 335 302 135 0 chr5 190004509 190004673 -13080859 + MIR SINE MIR 2 183 -65 231 281 172 11 chr5 190004746 190004867 -13080665 - MER5A DNA MER1_type -6 172 35 180 179 0 0 chr5 190006363 190006402 -13079130 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 371 298 84 23 chr5 190006402 190006533 -13078999 - L2 LINE L2 0 3272 3134 351 0 0 0 chr5 190006545 190006584 -13078948 + (TA)n Simple_repeat Simple_repeat 2 40 0 861 221 0 31 chr5 190006653 190006879 -13078653 + L1MB8 LINE L1 5892 6110 -68 275 310 153 26 chr5 190006879 190007147 -13078385 - MLT1K LTR MaLR -155 433 132 202 281 0 35 chr5 190008612 190008669 -13076863 + L3 LINE CR1 1516 1570 -7 370 321 66 15 chr5 190009219 190009415 -13076117 - L2 LINE L2 -1120 2194 1989 * 412 297 66 8 chr5 190009414 190009594 -13075938 - MIR SINE MIR -33 229 27 339 25 0 0 chr5 190009917 190009957 -13075575 + (TA)n Simple_repeat Simple_repeat 2 41 0 540 36 36 0 chr5 190010834 190010917 -13074615 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 703 204 34 45 chr5 190010930 190011106 -13074426 - MIR SINE MIR -29 233 60 253 343 61 28 chr5 190011712 190011925 -13073607 + Charlie8 DNA MER1_type 66 285 -2132 256 324 14 0 chr5 190012067 190012141 -13073391 + L2 LINE L2 3188 3262 -10 298 233 10 68 chr5 190013319 190013422 -13072110 - L3 LINE CR1 -3 1574 1478 * 458 317 183 31 chr5 190013393 190013781 -13071751 - L2 LINE L2 0 3313 2867 271 52 0 0 chr5 190014131 190014175 -13071357 + MLT2A1 LTR ERVL 1 36 -408 11609 67 5 1 chr5 190014175 190015717 -13069815 + HERVL-A2 LTR ERVL 2760 4306 -1348 3682 100 14 7 chr5 190015707 190016258 -13069274 + HERVL-A2 LTR ERVL 5002 5556 -98 * 940 201 30 19 chr5 190016359 190016759 -13068773 + MLT2A2 LTR ERVL 149 453 0 255 233 8 42 chr5 190016840 190016915 -13068617 + MER113 DNA MER1_type? 1 72 -449 1829 169 3 13 chr5 190016915 190017223 -13068309 - AluJo SINE Alu -7 305 1 255 233 8 42 chr5 190017223 190017267 -13068265 + MER113 DNA MER1_type? 72 116 -405 1389 132 9 27 chr5 190017593 190017813 -13067719 + AluJb SINE Alu 85 300 -12 978 228 125 33 chr5 190018050 190018572 -13066960 - L1MC5 LINE L1 -51 7910 7437 1261 144 88 30 chr5 190018572 190018791 -13066741 + MER33 DNA MER1_type 1 206 -2379 219 69 0 0 chr5 190018791 190018820 -13066712 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1812 166 0 7 chr5 190018823 190019107 -13066425 - AluJb SINE Alu -30 282 1 1261 144 88 30 chr5 190019107 190019188 -13066344 + MER33 DNA MER1_type 207 323 -1 978 228 125 33 chr5 190019188 190019235 -13066297 - L1MC5 LINE L1 -524 7437 7289 865 197 57 21 chr5 190019423 190019616 -13065916 - MER20 DNA MER1_type -4 215 16 193 325 175 0 chr5 190019821 190019901 -13065631 + L2 LINE L2 3136 3229 -43 248 342 106 53 chr5 190020108 190020668 -13064864 - L2 LINE L2 0 3313 2712 4678 175 42 12 chr5 190020676 190021996 -13063536 - L1MB7 LINE L1 0 6682 5081 1955 159 7 0 chr5 190021996 190022305 -13063227 + AluJb SINE Alu 1 311 -1 4678 175 42 12 chr5 190022305 190022639 -13062893 - L1MB7 LINE L1 -1601 5081 4758 5877 237 57 38 chr5 190022648 190022714 -13062818 - L1MB7 LINE L1 -2063 4581 4518 1690 169 59 0 chr5 190022714 190022987 -13062545 + AluJb SINE Alu 1 289 -23 5877 237 57 38 chr5 190022987 190024030 -13061502 - L1MB7 LINE L1 -2126 4518 3496 2068 119 3 35 chr5 190024030 190024341 -13061191 - AluSx SINE Alu -11 301 1 5877 237 57 38 chr5 190024341 190027229 -13058303 - L1MB7 LINE L1 -3148 3496 375 626 184 22 9 chr5 190027235 190027391 -13058141 - L1ME1 LINE L1 0 6334 6021 831 31 0 0 chr5 190027395 190027491 -13058041 + AluY SINE Alu 209 304 -7 326 258 89 8 chr5 190027491 190027615 -13057917 - L1ME1 LINE L1 -141 6025 5892 375 333 20 7 chr5 190027626 190027776 -13057756 - L2 LINE L2 -606 2708 2557 282 287 0 35 chr5 190029235 190029322 -13056210 + L2 LINE L2 3225 3308 -5 1921 217 47 7 chr5 190029363 190029810 -13055722 - MLT1C LTR MaLR -2 465 1 237 83 0 0 chr5 190030084 190030120 -13055412 + (A)n Simple_repeat Simple_repeat 1 36 0 1179 196 100 108 chr5 190031046 190031631 -13053901 + L1MC5 LINE L1 6776 7355 -606 2138 119 3 13 chr5 190031631 190031942 -13053590 + AluSx SINE Alu 1 308 -4 1179 196 100 108 chr5 190031942 190032084 -13053448 + L1MC5 LINE L1 7355 7497 -464 331 270 151 5 chr5 190032102 190032287 -13053245 + MLT1H LTR MaLR 23 234 -315 503 190 0 43 chr5 190032433 190032549 -13052983 + MLT1A1 LTR MaLR 35 145 -220 1082 192 10 5 chr5 190032614 190032817 -13052715 + MLT1A1 LTR MaLR 162 365 0 1237 243 124 16 chr5 190033683 190034155 -13051377 + MLT1G1 LTR MaLR 1 474 -56 1789 148 16 39 chr5 190034434 190034744 -13050788 + AluJo SINE Alu 1 303 -9 2210 132 0 3 chr5 190034748 190035052 -13050480 + AluSx SINE Alu 1 303 -9 276 305 97 7 chr5 190035676 190035830 -13049702 - L1ME1 LINE L1 -320 5801 5634 539 281 86 0 chr5 190035879 190036018 -13049514 - MIR SINE MIR -111 151 1 612 234 69 40 chr5 190036235 190036627 -13048905 - MLT1J1 LTR MaLR 0 446 1 878 233 49 9 chr5 190036649 190036872 -13048660 - MIR SINE MIR -3 259 28 281 277 43 0 chr5 190037372 190037466 -13048066 + GA-rich Low_complexity Low_complexity 1 98 0 224 298 30 53 chr5 190038208 190038339 -13047193 - MIR SINE MIR -57 205 78 243 265 79 62 chr5 190038807 190038990 -13046542 - MIR3 SINE MIR -65 143 2 1664 152 87 4 chr5 190039213 190039489 -13046043 + AluJb SINE Alu 1 299 -13 314 225 92 58 chr5 190039528 190039648 -13045884 - MIR SINE MIR -65 197 74 234 266 94 70 chr5 190039727 190039855 -13045677 + MIR SINE MIR 56 186 -76 373 315 27 40 chr5 190039886 190040108 -13045424 - MIR SINE MIR -36 226 8 2299 127 35 42 chr5 190040306 190040730 -13044802 + MSTB LTR MaLR 1 421 -5 231 103 0 0 chr5 190040944 190040983 -13044549 + (CA)n Simple_repeat Simple_repeat 2 40 0 359 279 50 39 chr5 190041675 190041854 -13043678 + MLT1K LTR MaLR 122 302 -286 228 278 0 0 chr5 190042542 190042596 -13042936 + (TG)n Simple_repeat Simple_repeat 1 54 0 395 207 117 32 chr5 190042742 190042955 -13042577 - MLT1D LTR MaLR -186 319 15 247 200 88 50 chr5 190042956 190043036 -13042496 + MLT1E2 LTR MaLR 27 109 -517 1671 169 0 37 chr5 190043267 190043602 -13041930 + AluJo SINE Alu 1 324 0 455 233 43 26 chr5 190044551 190044667 -13040865 - MIR3 SINE MIR -25 183 66 189 409 0 0 chr5 190044915 190045003 -13040529 - L3 LINE CR1 -19 1558 1471 301 273 25 56 chr5 190045007 190045168 -13040364 - L1MA10 LINE L1 0 6334 6179 7805 166 7 30 chr5 190045189 190047882 -13037650 - L1PB1 LINE L1 -1 6150 3522 13526 165 87 39 chr5 190047982 190049653 -13035879 - L1PBa LINE L1 -924 5938 4348 2079 156 3 0 chr5 190049653 190049954 -13035578 - AluSx SINE Alu -10 302 1 13526 165 87 39 chr5 190049954 190054034 -13031498 - L1PBa LINE L1 -2514 4348 1 4203 237 54 31 chr5 190054030 190056149 -13029383 - L1ME1 LINE L1 -121 6114 4045 * 2047 128 24 0 chr5 190056149 190056437 -13029095 - AluSx SINE Alu -17 295 1 4203 237 54 31 chr5 190056437 190057162 -13028370 - L1ME1 LINE L1 -2190 4045 3338 2774 7 0 0 chr5 190057162 190057461 -13028071 + AluYa5 SINE Alu 5 303 -8 4203 237 54 31 chr5 190057461 190058591 -13026941 - L1ME1 LINE L1 -2897 3338 650 * 16776 155 56 33 chr5 190058589 190061030 -13024502 + L1M1 LINE L1 16 2706 -4859 776 179 8 15 chr5 190061030 190061164 -13024368 + FLAM_C SINE Alu 1 133 0 16776 155 56 33 chr5 190061164 190062222 -13023310 + L1M1 LINE L1 2706 3739 -3826 6336 171 12 10 chr5 190062209 190063498 -13022034 + L1M1 LINE L1 4673 5964 -1601 * 306 196 149 48 chr5 190065168 190065336 -13020196 - MLT1F LTR MaLR -11 531 347 662 198 77 39 chr5 190065485 190065667 -13019865 + MIR SINE MIR 2 190 -72 233 286 51 31 chr5 190066033 190066131 -13019401 + MIR3 SINE MIR 89 188 -20 321 321 57 43 chr5 190066165 190066374 -13019158 + L2 LINE L2 2550 2761 -553 489 289 20 59 chr5 190066626 190066830 -13018702 + LTR33 LTR ERVL 326 521 0 2831 127 26 16 chr5 190066891 190067215 -13018317 + MSTC LTR MaLR 1 331 -97 2249 83 3 3 chr5 190067215 190067504 -13018028 + AluY SINE Alu 8 296 -15 2831 127 26 16 chr5 190067504 190067603 -13017929 + MSTC LTR MaLR 331 428 0 2314 94 7 7 chr5 190067726 190068033 -13017499 - AluSc SINE Alu -2 307 1 354 328 74 81 chr5 190068048 190068371 -13017161 + L2 LINE L2 2937 3257 -15 573 298 41 29 chr5 190069916 190070158 -13015374 + MIR SINE MIR 12 256 -6 882 48 27 20 chr5 190070176 190070323 -13015209 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 757 293 109 33 chr5 190071896 190072358 -13013174 + L1ME3 LINE L1 5270 5783 -379 2189 123 0 0 chr5 190072358 190072658 -13012874 + AluSx SINE Alu 1 300 -12 757 293 109 33 chr5 190072658 190072830 -13012702 + L1ME3 LINE L1 5783 5940 -222 527 294 73 48 chr5 190073053 190073342 -13012190 + L1MEd LINE L1 504 799 -5320 249 178 22 0 chr5 190073994 190074039 -13011493 + MLT1J1 LTR MaLR 346 391 -55 1785 132 75 0 chr5 190074113 190074393 -13011139 + AluSx SINE Alu 1 301 -11 284 268 78 56 chr5 190074393 190074662 -13010870 + L1MEd LINE L1 686 960 -5159 * 1284 265 62 3 chr5 190074644 190075212 -13010320 + L1ME3A LINE L1 4812 5419 -743 1384 243 55 6 chr5 190075212 190075574 -13009958 + MLT1D LTR MaLR 118 497 -8 2109 211 78 4 chr5 190075580 190076091 -13009441 + L1ME3A LINE L1 5616 6164 -6 589 261 70 31 chr5 190076097 190076384 -13009148 + L1MEd LINE L1 945 1242 -4877 2890 231 36 16 chr5 190076514 190077257 -13008275 - L1ME1 LINE L1 -7 6159 5395 1983 124 7 10 chr5 190077257 190077555 -13007977 - AluSq SINE Alu -8 305 9 2890 231 36 16 chr5 190077555 190077658 -13007874 - L1ME1 LINE L1 -771 5395 5295 5674 184 58 14 chr5 190077857 190079827 -13005705 - L1PA13 LINE L1 -35 6128 4071 713 305 66 9 chr5 190079922 190080148 -13005384 - MIR SINE MIR -6 256 18 1075 255 375 17 chr5 190080689 190081527 -13004005 - L2 LINE L2 -860 2454 1317 7355 141 9 23 chr5 190081726 190082188 -13003344 + L1MA2 LINE L1 4558 5025 -1279 2113 118 10 23 chr5 190082188 190082494 -13003038 + AluSx SINE Alu 1 302 -10 7355 141 9 23 chr5 190082494 190082698 -13002834 + L1MA2 LINE L1 5025 5230 -1074 2142 99 27 3 chr5 190082698 190082991 -13002541 + AluSq SINE Alu 13 312 -1 7355 141 9 23 chr5 190082991 190084071 -13001461 + L1MA2 LINE L1 5230 6250 -54 246 62 0 0 chr5 190084072 190084104 -13001428 + (A)n Simple_repeat Simple_repeat 1 32 0 1231 246 86 68 chr5 190084111 190084717 -13000815 - L1MEc LINE L1 -5724 672 56 251 367 127 0 chr5 190084758 190085017 -13000515 + L2 LINE L2 2061 2352 -962 920 274 63 51 chr5 190086402 190086683 -12998849 + L1ME4a LINE L1 5422 5713 -408 2396 71 7 0 chr5 190086683 190086980 -12998552 - AluY SINE Alu -12 299 1 920 274 63 51 chr5 190086980 190087187 -12998345 + L1ME4a LINE L1 5713 5916 -205 199 274 59 0 chr5 190087461 190087512 -12998020 - MER5B DNA MER1_type 0 178 125 235 286 29 0 chr5 190087519 190087589 -12997943 - LTR16C LTR ERVL 0 491 420 367 232 134 9 chr5 190088176 190088288 -12997244 + MER5B DNA MER1_type 53 178 0 374 254 26 0 chr5 190089026 190089140 -12996392 + MIR3 SINE MIR 85 201 -7 783 165 0 0 chr5 190089570 190089685 -12995847 - FLAM_C SINE Alu -27 116 2 21 57 0 0 chr5 190089875 190089910 -12995622 + AT_rich Low_complexity Low_complexity 1 35 0 202 371 95 0 chr5 190089910 190090015 -12995517 + L2 LINE L2 3147 3261 -11 2935 124 16 23 chr5 190090221 190090664 -12994868 - L1PA15 LINE L1 -9 6156 5717 475 286 71 31 chr5 190091390 190091586 -12993946 - MIR SINE MIR -58 204 1 1668 165 4 18 chr5 190091632 190091904 -12993628 - AluJb SINE Alu -30 282 15 498 221 62 72 chr5 190092103 190092298 -12993234 - MLT1L LTR MaLR -5 610 418 329 267 59 10 chr5 190092324 190092425 -12993107 - MIR SINE MIR -4 258 153 225 268 182 56 chr5 190092576 190092774 -12992758 - MLT1L LTR MaLR -346 269 47 2101 146 53 21 chr5 190093343 190093721 -12991811 + MLT1B LTR MaLR 1 390 0 828 310 14 5 chr5 190095505 190095721 -12989811 + MIR SINE MIR 32 249 -13 186 226 94 0 chr5 190095941 190095994 -12989538 + L3 LINE CR1 259 316 -1261 186 43 0 0 chr5 190097067 190097090 -12988442 + (TTG)n Simple_repeat Simple_repeat 2 24 0 858 294 70 36 chr5 190097111 190097495 -12988037 - LTR16A LTR ERVL -27 423 27 8166 25 3 0 chr5 190098378 190099809 -12985723 - L1PA4 LINE L1 0 6155 4723 12562 28 0 16 chr5 190099809 190101318 -12984214 + L1PA4 LINE L1 3234 4718 -1428 396 257 35 35 chr5 190101824 190101995 -12983537 + L1ME LINE L1 5635 5805 -316 253 240 67 0 chr5 190102031 190102106 -12983426 - MER116 DNA Mariner 0 80 1 391 319 22 21 chr5 190102366 190102516 -12983016 - MIR SINE MIR -69 139 5 253 293 112 17 chr5 190102907 190103023 -12982509 + MIR SINE MIR 20 146 -62 305 344 91 13 chr5 190104107 190104337 -12981195 + MIR SINE MIR 7 254 -8 257 341 0 12 chr5 190104352 190104434 -12981098 + L2 LINE L2 3148 3228 -44 204 133 50 0 chr5 190104704 190104764 -12980768 + (ATTTG)n Simple_repeat Simple_repeat 1 63 0 245 350 60 10 chr5 190105470 190105570 -12979962 - MIR SINE MIR -88 120 16 2252 90 0 3 chr5 190105777 190106066 -12979466 - AluY SINE Alu -11 300 13 1705 171 151 34 chr5 190106082 190106498 -12979034 - MLT1C LTR MaLR -2 465 1 367 246 91 35 chr5 190106508 190106707 -12978825 + MER113 DNA MER1_type? 1 210 -311 371 258 39 26 chr5 190107302 190107457 -12978075 - MER117 DNA MER1_type -39 158 2 30 0 0 0 chr5 190107745 190107775 -12977757 + AT_rich Low_complexity Low_complexity 1 30 0 9540 74 14 19 chr5 190107778 190109804 -12975728 - L1PA7 LINE L1 -7 6147 4127 239 67 0 0 chr5 190109811 190109841 -12975691 + L1P LINE L1 2530 2559 -3587 702 229 6 0 chr5 190110185 190110342 -12975190 - MIR SINE MIR -1 261 104 1123 198 9 18 chr5 190110654 190110876 -12974656 + MER63C DNA MER1_type 253 472 -458 467 195 195 0 chr5 190110914 190111001 -12974531 - AluSc SINE Alu -73 236 133 2055 112 0 7 chr5 190111001 190111323 -12974209 - AluSx SINE Alu 0 320 1 317 80 20 0 chr5 190111323 190111373 -12974159 + MER63C DNA MER1_type 460 510 -420 557 265 48 0 chr5 190111482 190111648 -12973884 + MER63C DNA MER1_type 755 928 -2 404 306 5 38 chr5 190111740 190111926 -12973606 + L1ME3A LINE L1 5692 5871 -299 685 245 86 0 chr5 190111927 190112078 -12973454 + FRAM SINE Alu 1 164 -2 4811 135 59 8 chr5 190112285 190113032 -12972500 + LTR1 LTR ERV1 1 785 0 35 71 0 0 chr5 190113190 190113260 -12972272 + AT_rich Low_complexity Low_complexity 1 70 0 567 308 11 11 chr5 190114372 190114554 -12970978 - MIR SINE MIR -33 229 48 940 125 0 0 chr5 190114662 190114798 -12970734 + L1PA15 LINE L1 6024 6159 -6 1669 167 87 106 chr5 190114941 190115015 -12970517 - MLT2B1 LTR ERVL -2 518 444 204 97 0 0 chr5 190115015 190115046 -12970486 + (TG)n Simple_repeat Simple_repeat 2 32 0 1669 167 87 106 chr5 190115046 190115499 -12970033 - MLT2B1 LTR ERVL -76 444 1 22 80 0 0 chr5 190115630 190115680 -12969852 + AT_rich Low_complexity Low_complexity 1 50 0 316 242 110 0 chr5 190115742 190115833 -12969699 + L1ME LINE L1 5466 5566 -604 1919 192 70 36 chr5 190115833 190115897 -12969635 + MSTB2 LTR MaLR 1 61 -396 2740 79 6 0 chr5 190115897 190116250 -12969282 - THE1A LTR MaLR 0 355 1 12027 89 1 6 chr5 190116250 190117837 -12967695 - THE1A-int LTR MaLR 0 1580 1 2184 89 98 9 chr5 190117837 190118163 -12967369 - THE1A LTR MaLR 0 355 1 1919 192 70 36 chr5 190118163 190118538 -12966994 + MSTB2 LTR MaLR 60 457 0 396 289 31 25 chr5 190118540 190118699 -12966833 + L1ME LINE L1 5564 5723 -447 204 370 43 0 chr5 190119574 190119666 -12965866 - MIR SINE MIR -121 141 46 207 139 28 0 chr5 190120172 190120208 -12965324 - L2 LINE L2 -513 2801 2765 252 299 36 98 chr5 190121493 190121619 -12963913 - MIR SINE MIR -14 248 137 1524 151 110 11 chr5 190121619 190121891 -12963641 + AluJo SINE Alu 5 303 -9 252 299 36 98 chr5 190121891 190121958 -12963574 - MIR SINE MIR -125 137 67 455 259 175 0 chr5 190122199 190122450 -12963082 - LTR50 LTR ERVL -483 312 18 1299 229 59 31 chr5 190122469 190122858 -12962674 - MLT1C LTR MaLR -5 462 63 1088 93 29 52 chr5 190123066 190123238 -12962294 + L1PA11 LINE L1 6001 6168 -6 396 59 0 0 chr5 190123341 190123392 -12962140 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 704 176 38 124 chr5 190123719 190123828 -12961704 + MIR SINE MIR 41 158 -104 2164 119 0 3 chr5 190123828 190124123 -12961409 - AluSg SINE Alu -16 294 1 704 176 38 124 chr5 190124123 190124171 -12961361 + MIR SINE MIR 158 178 -84 2019 157 0 0 chr5 190124171 190124471 -12961061 + AluSx SINE Alu 1 300 -12 704 176 38 124 chr5 190124471 190124522 -12961010 + MIR SINE MIR 178 232 -30 253 313 65 25 chr5 190124981 190125182 -12960350 + MLT1K LTR MaLR 367 575 -13 817 340 70 34 chr5 190127231 190127787 -12957745 + MLT1K LTR MaLR 1 576 -12 930 264 21 12 chr5 190127894 190128136 -12957396 - MIR SINE MIR -17 245 2 1867 183 25 6 chr5 190128397 190128752 -12956780 - MLT1A1 LTR MaLR 0 365 4 1850 158 15 66 chr5 190128961 190129371 -12956161 + MLT1B LTR MaLR 1 389 -1 502 272 98 31 chr5 190129554 190129769 -12955763 + MIR SINE MIR 28 249 -13 1781 165 3 18 chr5 190130472 190130781 -12954751 - AluJb SINE Alu 0 305 1 2178 134 40 81 chr5 190131650 190132120 -12953412 + Tigger1 DNA MER2_type 1 451 -1967 2005 115 3 21 chr5 190132149 190132479 -12953053 + Tigger1 DNA MER2_type 935 1258 -1160 737 224 0 0 chr5 190132479 190132613 -12952919 - FLAM_A SINE Alu -8 134 1 7003 107 38 15 chr5 190132614 190132848 -12952684 + Tigger1 DNA MER2_type 1249 1476 -942 2221 133 0 0 chr5 190132848 190133150 -12952382 + AluSg SINE Alu 1 302 -8 7003 107 38 15 chr5 190133150 190134054 -12951478 + Tigger1 DNA MER2_type 1476 2413 -5 800 237 32 44 chr5 190134458 190134707 -12950825 + MER102a DNA MER1_type 84 329 -1 2121 103 7 14 chr5 190137813 190138103 -12947429 - AluSx SINE Alu -7 305 18 410 270 18 84 chr5 190138131 190138357 -12947175 - LTR33A LTR ERVL -5 518 308 502 298 12 6 chr5 190138637 190138805 -12946727 - LTR33 LTR ERVL -343 178 10 490 276 50 11 chr5 190142738 190142919 -12942613 + L1ME LINE L1 5604 5791 -330 836 285 33 12 chr5 190142924 190143166 -12942366 + MIR SINE MIR 8 254 -8 820 103 0 0 chr5 190143217 190143324 -12942208 + U6 snRNA snRNA 1 107 0 6263 104 51 10 chr5 190143324 190145030 -12940502 + L1PA11 LINE L1 4429 6174 0 205 288 14 0 chr5 190145325 190145398 -12940134 + (TA)n Simple_repeat Simple_repeat 1 74 0 189 0 0 0 chr5 190145411 190145432 -12940100 + (TA)n Simple_repeat Simple_repeat 1 21 0 273 286 11 11 chr5 190145594 190145685 -12939847 - MER96 DNA MER1_type? 0 175 85 23 54 0 0 chr5 190146725 190146762 -12938770 + AT_rich Low_complexity Low_complexity 1 37 0 1652 233 70 38 chr5 190147085 190147302 -12938230 + MLT1E LTR MaLR 1 210 -383 2303 175 26 7 chr5 190147302 190147720 -12937812 + MSTB LTR MaLR 1 426 0 1652 233 70 38 chr5 190147720 190148070 -12937462 + MLT1E LTR MaLR 210 591 -2 320 234 15 80 chr5 190148399 190148536 -12936996 + LTR16A LTR ERVL 321 448 -2 378 0 0 0 chr5 190148586 190148628 -12936904 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 351 71 0 chr5 190148641 190148949 -12936583 - L1MEc LINE L1 -4612 2133 1804 21 57 0 0 chr5 190149028 190149063 -12936469 + AT_rich Low_complexity Low_complexity 1 35 0 314 306 106 31 chr5 190149087 190149342 -12936190 - L1MCb LINE L1 -4076 2488 2215 4532 198 21 19 chr5 190149507 190150626 -12934906 + L1 LINE L1 3567 4687 -1459 3043 194 59 19 chr5 190150630 190151474 -12934058 - L1MCb LINE L1 -4849 1196 825 926 145 37 61 chr5 190151480 190151519 -12934013 - L1 LINE L1 -2175 5390 5352 2503 55 10 29 chr5 190151519 190151830 -12933702 - AluSp SINE Alu -8 305 1 926 145 37 61 chr5 190151830 190152004 -12933528 - L1 LINE L1 -2213 5352 5182 312 208 13 0 chr5 190152004 190152081 -12933451 - LTR55 LTR ERV -389 159 82 2948 171 61 27 chr5 190152086 190152711 -12932821 - L1 LINE L1 -6908 657 12 1938 199 14 50 chr5 190152708 190153265 -12932267 - L1M4 LINE L1 -933 5213 4677 * 756 182 89 21 chr5 190153389 190153669 -12931863 - L1M4 LINE L1 -3230 2916 2618 988 226 83 60 chr5 190153669 190154054 -12931478 + MLT2C2 LTR ERVL 65 458 -6 374 53 18 0 chr5 190154134 190154191 -12931341 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 1986 157 0 27 chr5 190154192 190154568 -12930964 - MER47A DNA MER2_type 0 366 1 21 0 0 0 chr5 190154589 190154610 -12930922 + AT_rich Low_complexity Low_complexity 1 21 0 1745 124 0 26 chr5 190154667 190154932 -12930600 - AluJb SINE Alu -22 290 33 1824 109 0 31 chr5 190155899 190156192 -12929340 - AluSc SINE Alu -25 284 1 488 218 82 48 chr5 190156840 190156987 -12928545 + MIR SINE MIR 40 191 -71 381 236 91 9 chr5 190157026 190157136 -12928396 + L2 LINE L2 2512 2630 -684 238 331 52 37 chr5 190157286 190157422 -12928110 + L2 LINE L2 456 593 -2721 784 145 21 41 chr5 190157852 190157997 -12927535 - BC200 scRNA scRNA -57 143 2 559 239 8 8 chr5 190158003 190158137 -12927395 + MLT1J LTR MaLR 44 177 -334 368 228 60 34 chr5 190158123 190158272 -12927260 + MLT1J LTR MaLR 326 478 -33 * 557 310 134 8 chr5 190159722 190159961 -12925571 - L2 LINE L2 -617 2697 2429 198 0 0 0 chr5 190160009 190160031 -12925501 + (A)n Simple_repeat Simple_repeat 1 22 0 2342 90 3 6 chr5 190160322 190160633 -12924899 + AluSg SINE Alu 1 310 0 412 343 23 12 chr5 190160994 190161166 -12924366 + MIR SINE MIR 12 185 -77 21 36 0 0 chr5 190161392 190161420 -12924112 + AT_rich Low_complexity Low_complexity 1 28 0 1051 193 152 12 chr5 190163393 190163637 -12921895 + AluJo SINE Alu 4 281 -31 183 80 0 0 chr5 190163642 190163667 -12921865 + (TAA)n Simple_repeat Simple_repeat 2 26 0 517 281 79 35 chr5 190164086 190164314 -12921218 - L2 LINE L2 -2 3311 3074 * 3634 252 200 14 chr5 190164289 190165676 -12919856 - L2 LINE L2 -350 2964 1321 370 314 79 63 chr5 190165965 190166280 -12919252 - L2 LINE L2 -5 3308 2989 1422 47 0 0 chr5 190166363 190166533 -12918999 - AluYb8 SINE Alu -13 305 136 474 241 91 37 chr5 190166533 190166720 -12918812 - MIR SINE MIR -53 209 13 681 258 68 11 chr5 190166776 190166966 -12918566 + MIR SINE MIR 30 230 -32 762 210 99 12 chr5 190166975 190167218 -12918314 - MER33 DNA MER1_type 0 324 61 215 108 15 92 chr5 190167856 190167921 -12917611 + (TTTTTG)n Simple_repeat Simple_repeat 2 61 0 266 236 313 14 chr5 190168057 190168201 -12917331 - MIR SINE MIR -56 206 20 999 282 129 59 chr5 190168338 190168828 -12916704 + L2 LINE L2 1563 2086 -1228 209 274 170 9 chr5 190169412 190169518 -12916014 - L2 LINE L2 -225 3047 2925 185 283 133 0 chr5 190169895 190169955 -12915577 + L3 LINE CR1 1380 1447 -130 201 278 0 0 chr5 190170076 190170130 -12915402 - L2 LINE L2 -92 3221 3168 283 266 38 0 chr5 190170901 190170980 -12914552 + MLT1K LTR MaLR 190 271 -317 1161 162 117 104 chr5 190171003 190171401 -12914131 + MLT1A2 LTR MaLR 1 374 0 259 236 45 22 chr5 190171475 190171564 -12913968 + MLT1K LTR MaLR 411 501 -87 2230 127 0 0 chr5 190171626 190171933 -12913599 - AluSx SINE Alu -5 307 1 592 311 135 27 chr5 190172776 190173072 -12912460 - L2 LINE L2 -1228 2086 1759 499 293 24 37 chr5 190173429 190173593 -12911939 + MIR SINE MIR 5 166 -96 360 322 154 39 chr5 190173669 190173902 -12911630 + L2 LINE L2 3012 3271 -1 578 291 12 0 chr5 190175677 190175849 -12909683 + MER5B DNA MER1_type 1 174 -4 304 262 215 20 chr5 190175912 190176061 -12909471 - MER5B DNA MER1_type 0 178 1 720 151 87 0 chr5 190176233 190176405 -12909127 - MER53 DNA DNA 0 189 3 474 18 0 0 chr5 190178138 190178193 -12907339 + (CA)n Simple_repeat Simple_repeat 2 56 0 427 291 43 50 chr5 190178808 190178900 -12906632 - MIR3 SINE MIR -10 198 106 2238 128 0 0 chr5 190178900 190179206 -12906326 - AluSx SINE Alu -6 306 1 427 291 43 50 chr5 190179206 190179254 -12906278 - MIR3 SINE MIR -102 106 59 209 196 18 0 chr5 190180384 190180440 -12905092 + CT-rich Low_complexity Low_complexity 2 58 0 279 54 0 0 chr5 190180849 190180886 -12904646 + (CA)n Simple_repeat Simple_repeat 1 37 0 479 285 140 10 chr5 190181836 190182043 -12903489 + MIR SINE MIR 29 262 0 511 250 35 10 chr5 190182173 190182373 -12903159 - L1MC5 LINE L1 -37 7924 7720 592 235 75 5 chr5 190182375 190182562 -12902970 + MLT1H LTR MaLR 1 200 -349 228 327 159 9 chr5 190182575 190182688 -12902844 + MLT1H LTR MaLR 420 549 0 294 29 0 0 chr5 190183040 190183075 -12902457 + (CA)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr5 190183096 190183122 -12902410 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr5 190183121 190183158 -12902374 + (GA)n Simple_repeat Simple_repeat 1 37 0 1755 145 13 48 chr5 190183220 190183530 -12902002 + AluJo SINE Alu 3 301 -11 196 138 0 52 chr5 190183536 190183594 -12901938 + (GAA)n Simple_repeat Simple_repeat 1 55 0 194 217 0 17 chr5 190183714 190183774 -12901758 + GA-rich Low_complexity Low_complexity 3 61 0 553 251 133 9 chr5 190184554 190184765 -12900767 + L2 LINE L2 3062 3298 -15 234 315 56 49 chr5 190184839 190185001 -12900531 - MER5A DNA MER1_type -6 183 21 2226 94 0 7 chr5 190185486 190185773 -12899759 + AluSq SINE Alu 1 285 -28 279 349 52 0 chr5 190185950 190186182 -12899350 + L1ME LINE L1 5556 5799 -322 656 284 113 0 chr5 190186186 190186408 -12899124 - MIR SINE MIR -8 254 8 299 270 103 30 chr5 190187186 190187436 -12898096 + MLT1L LTR MaLR 344 511 0 394 284 124 43 chr5 190188281 190188563 -12896969 + L2 LINE L2 3008 3312 -1 403 298 78 10 chr5 190190594 190190903 -12894629 - L1MC4 LINE L1 -23 8019 7690 261 146 0 0 chr5 190191760 190191808 -12893724 + (GAAAA)n Simple_repeat Simple_repeat 5 52 0 303 183 14 0 chr5 190191817 190191888 -12893644 + L1ME1 LINE L1 5198 5269 -877 478 203 261 0 chr5 190191892 190192045 -12893487 + L1ME1 LINE L1 5313 5505 -659 * 1263 194 28 108 chr5 190192042 190192507 -12893025 + L1ME1 LINE L1 5734 6161 -5 294 226 22 58 chr5 190192518 190192655 -12892877 + L1M4 LINE L1 5199 5330 -816 359 326 75 32 chr5 190192670 190192949 -12892583 + L1MEc LINE L1 1906 2196 -4200 21 57 0 0 chr5 190192964 190192999 -12892533 + AT_rich Low_complexity Low_complexity 1 35 0 1569 90 20 12 chr5 190193170 190193415 -12892117 + L1PB1 LINE L1 5900 6146 -5 2507 186 104 36 chr5 190193425 190193901 -12891631 + L1MCa LINE L1 1549 1991 -4435 2516 73 0 6 chr5 190193901 190194214 -12891318 + AluY SINE Alu 1 311 0 2507 186 104 36 chr5 190194214 190194576 -12890956 + L1MCa LINE L1 1991 2464 -3962 4793 242 30 17 chr5 190194579 190194784 -12890748 + L1MCa LINE L1 2756 2957 -3469 1853 156 52 27 chr5 190194784 190195150 -12890382 + THE1C LTR MaLR 1 375 0 4793 242 30 17 chr5 190195150 190196500 -12889032 + L1MCa LINE L1 2957 4332 -2094 1697 73 0 0 chr5 190196511 190196745 -12888787 + L1P5 LINE L1 5558 5791 -360 929 221 43 102 chr5 190197013 190197521 -12888011 + L1MCa LINE L1 4337 4814 -1612 7003 65 148 11 chr5 190197522 190198597 -12886935 + MER11B LTR ERVK 1 1222 -14 1812 219 19 36 chr5 190198638 190199162 -12886370 + L1MCa LINE L1 4811 5325 -1101 283 196 0 0 chr5 190199171 190199227 -12886305 - LTR69 LTR ERVL -531 57 2 6070 73 0 8 chr5 190199342 190200163 -12885369 + L1P LINE L1 7 820 -5326 * 18185 35 1 1 chr5 190200155 190202477 -12883055 + L1P LINE L1 1973 4294 -1852 13341 110 8 3 chr5 190202481 190204616 -12880916 - L1P LINE L1 -1017 5129 2983 5011 117 29 30 chr5 190204620 190205157 -12880375 + Tigger1 DNA MER2_type 1553 2090 -328 1742 188 0 31 chr5 190205157 190205294 -12880238 + AluJb SINE Alu 1 141 -171 2286 110 3 13 chr5 190205294 190205604 -12879928 + AluSp SINE Alu 1 307 -6 1742 188 0 31 chr5 190205604 190205786 -12879746 + AluJb SINE Alu 141 310 -2 5011 117 29 30 chr5 190205786 190206114 -12879418 + Tigger1 DNA MER2_type 2090 2417 -1 355 265 151 49 chr5 190206116 190206428 -12879104 + MLT1J2 LTR MaLR 71 474 -37 468 306 177 0 chr5 190206473 190206682 -12878850 + L2 LINE L2 2506 2751 -563 2054 181 96 37 chr5 190206684 190207197 -12878335 - MER90 LTR ERV1 0 614 72 418 352 60 19 chr5 190207211 190207427 -12878105 + L2 LINE L2 2751 2975 -339 4378 65 2 0 chr5 190207451 190208017 -12877515 - L1PA8 LINE L1 -14 6158 5592 740 62 0 0 chr5 190208017 190208114 -12877418 + L1PA8 LINE L1 5503 5599 -573 248 371 97 16 chr5 190208232 190208356 -12877176 + L2 LINE L2 3137 3270 -2 258 242 32 0 chr5 190208722 190208784 -12876748 - Charlie8 DNA MER1_type -993 1424 1361 843 269 109 13 chr5 190208831 190209217 -12876315 - Charlie8 DNA MER1_type -1940 477 55 362 117 8 97 chr5 190209899 190209910 -12875622 + L1PB1 LINE L1 5782 5792 -362 1894 89 33 0 chr5 190209910 190210181 -12875351 - L1PB1 LINE L1 -4 6147 5868 362 117 8 97 chr5 190210181 190210258 -12875274 + L1PB1 LINE L1 5792 5869 -285 462 258 11 49 chr5 190211503 190211667 -12873865 + MIR SINE MIR 98 250 -12 218 257 0 43 chr5 190211665 190211735 -12873797 - MIR SINE MIR -140 122 56 * 5288 219 54 17 chr5 190212607 190213096 -12872436 + Cheshire DNA MER1_type 1 470 -1950 2135 139 29 73 chr5 190213096 190213505 -12872027 + MSTD LTR MaLR 3 393 -3 5288 219 54 17 chr5 190213505 190214372 -12871160 + Cheshire DNA MER1_type 470 1407 -1013 944 188 85 33 chr5 190214344 190214674 -12870858 + Cheshire DNA MER1_type 2073 2419 -1 * 1027 186 130 47 chr5 190214702 190215024 -12870508 + MLT2C1 LTR ERVL 1 349 -48 342 320 0 0 chr5 190215024 190215121 -12870411 + L1MC4 LINE L1 6607 6703 -1339 * 343 245 0 43 chr5 190215039 190215133 -12870399 - L1MC4 LINE L1 -1339 6703 6614 355 265 41 0 chr5 190215139 190215237 -12870295 + L1MC4 LINE L1 6614 6715 -1327 2183 91 3 23 chr5 190215742 190216049 -12869483 + AluSp SINE Alu 1 301 -12 498 241 228 0 chr5 190216105 190216250 -12869282 - MIR SINE MIR -62 200 23 194 292 134 41 chr5 190217436 190217607 -12867925 - MER5A DNA MER1_type -2 187 1 442 254 119 8 chr5 190217820 190217946 -12867586 + MIR SINE MIR 120 259 -3 191 271 85 0 chr5 190218093 190218152 -12867380 - MIR SINE MIR -80 182 119 197 293 172 37 chr5 190218228 190218443 -12867089 - L2 LINE L2 -341 2973 2730 1713 235 75 26 chr5 190218702 190219166 -12866366 - MLT1J LTR MaLR -1 510 24 1623 199 36 54 chr5 190219170 190219557 -12865975 - MLT1B LTR MaLR 0 390 11 867 245 160 30 chr5 190219712 190220206 -12865326 - MER34B LTR ERV1 0 565 8 1767 180 35 23 chr5 190220277 190220622 -12864910 - MLT1C LTR MaLR -118 349 1 213 238 0 0 chr5 190221515 190221557 -12863975 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 438 311 60 38 chr5 190221557 190221740 -12863792 - L2 LINE L2 -1 3312 3126 2110 118 6 62 chr5 190222663 190223020 -12862512 - MER1B DNA MER1_type 0 337 1 1503 301 59 19 chr5 190223313 190223852 -12861680 - L2 LINE L2 -338 2976 2416 6451 80 9 28 chr5 190223947 190225068 -12860464 - L1PA8 LINE L1 0 6172 5050 2153 82 3 13 chr5 190225068 190225374 -12860158 - AluY SINE Alu -8 303 1 6451 80 9 28 chr5 190225374 190225650 -12859882 - L1PA8 LINE L1 -1122 5050 4770 318 282 47 0 chr5 190225674 190225759 -12859773 - MIR SINE MIR -62 200 112 223 157 39 20 chr5 190226489 190226540 -12858992 + L2 LINE L2 3185 3236 -77 351 205 8 25 chr5 190226574 190226696 -12858836 + (TGGA)n Simple_repeat Simple_repeat 1 120 0 205 182 30 91 chr5 190227181 190227247 -12858285 + L2 LINE L2 3159 3220 -93 257 218 0 0 chr5 190227367 190227422 -12858110 + (TG)n Simple_repeat Simple_repeat 1 55 0 1203 125 17 73 chr5 190227474 190227706 -12857826 - MER20 DNA MER1_type 0 219 1 761 330 8 23 chr5 190227887 190228151 -12857381 + MIR SINE MIR 3 262 0 363 267 133 0 chr5 190228797 190228887 -12856645 - L2 LINE L2 -9 3263 3162 575 232 121 5 chr5 190228944 190229124 -12856408 + MIR SINE MIR 15 219 -43 1929 124 27 0 chr5 190229124 190229422 -12856110 - AluSx SINE Alu -5 307 2 275 380 0 0 chr5 190229429 190229500 -12856032 + L2 LINE L2 3216 3286 -27 * 279 299 0 15 chr5 190229503 190229570 -12855962 + L2 LINE L2 3239 3304 -9 211 344 32 48 chr5 190229649 190229774 -12855758 + MIR SINE MIR 52 174 -88 318 309 126 26 chr5 190231005 190231235 -12854297 + L3 LINE CR1 1106 1358 -219 643 300 11 62 chr5 190231310 190231474 -12854058 - MIR SINE MIR -11 251 103 644 296 16 0 chr5 190231474 190231663 -12853869 - MER91A DNA MER1_type -3 193 2 643 300 11 62 chr5 190231663 190231758 -12853774 - MIR SINE MIR -159 103 5 614 176 80 0 chr5 190231861 190231986 -12853546 - MIR SINE MIR -72 190 56 226 354 0 0 chr5 190232048 190232113 -12853419 + G-rich Low_complexity Low_complexity 1 65 0 660 247 144 12 chr5 190232310 190232540 -12852992 + MIR SINE MIR 4 262 0 203 364 0 13 chr5 190233309 190233386 -12852146 + L2 LINE L2 3185 3260 -12 255 231 46 0 chr5 190233386 190233451 -12852081 - L1MB3 LINE L1 0 6183 6116 322 310 207 0 chr5 190234180 190234325 -12851207 + MER91A DNA MER1_type 2 176 -20 215 325 13 13 chr5 190234841 190234918 -12850614 - MIR SINE MIR -38 224 148 264 200 0 0 chr5 190235004 190235069 -12850463 + (CA)n Simple_repeat Simple_repeat 2 66 0 330 214 100 14 chr5 190235579 190235649 -12849883 - MIR SINE MIR -62 146 71 1739 142 38 3 chr5 190235650 190235939 -12849593 - AluSx SINE Alu -13 299 1 407 234 11 63 chr5 190236714 190236889 -12848643 + HAL1b LINE L1 584 749 -599 1024 230 84 58 chr5 190237207 190237552 -12847980 + HAL1b LINE L1 748 1116 -232 2219 62 0 0 chr5 190237552 190237828 -12847704 + AluY SINE Alu 28 303 -8 1024 230 84 58 chr5 190237828 190238068 -12847464 + HAL1b LINE L1 1116 1348 0 608 178 119 25 chr5 190238093 190238211 -12847321 + FLAM_A SINE Alu 4 132 -1 248 296 0 0 chr5 190238216 190238297 -12847235 - L1ME4a LINE L1 -70 6051 5971 616 190 0 9 chr5 190238307 190238477 -12847055 - FLAM_A SINE Alu 0 169 1 309 313 137 14 chr5 190238525 190238736 -12846796 + MIR SINE MIR 20 256 -6 634 200 0 0 chr5 190239547 190239657 -12845875 + FRAM SINE Alu 37 146 -30 201 74 0 0 chr5 190239660 190239687 -12845845 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 190240367 190240395 -12845137 + AT_rich Low_complexity Low_complexity 1 28 0 445 264 83 35 chr5 190240485 190240629 -12844903 - MIR SINE MIR -92 170 20 5061 176 15 27 chr5 190240642 190241780 -12843752 - L1MA9 LINE L1 -37 6275 5154 2050 128 63 38 chr5 190241805 190242171 -12843361 - THE1C LTR MaLR 0 375 1 9802 130 11 41 chr5 190242171 190243797 -12841735 - THE1C-int LTR MaLR 0 1580 3 1776 163 67 28 chr5 190243799 190244160 -12841372 - THE1C LTR MaLR 0 375 1 324 257 0 0 chr5 190244272 190244706 -12840826 + (TA)n Simple_repeat Simple_repeat 1 434 0 306 241 0 0 chr5 190244726 190244813 -12840719 + (TA)n Simple_repeat Simple_repeat 1 87 0 307 315 94 16 chr5 190245008 190245135 -12840397 - MIR SINE MIR -76 186 50 1485 207 75 26 chr5 190245337 190245685 -12839847 - MLT1A1 LTR MaLR 0 365 1 212 243 0 71 chr5 190246177 190246247 -12839285 + L2 LINE L2 3244 3308 -5 597 313 99 5 chr5 190246616 190246827 -12838705 + MIR SINE MIR 18 248 -14 677 299 23 36 chr5 190246923 190247144 -12838388 + MIR SINE MIR 45 262 0 228 364 106 23 chr5 190247176 190247308 -12838224 + L3 LINE CR1 1385 1527 -50 793 246 6 22 chr5 190247370 190247553 -12837979 + MIR SINE MIR 45 224 -38 275 227 30 0 chr5 190247573 190247639 -12837893 + CT-rich Low_complexity Low_complexity 4 71 0 433 285 99 46 chr5 190248203 190248466 -12837066 - MER102b DNA MER1_type 0 341 65 195 42 0 0 chr5 190248527 190248551 -12836981 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 202 258 48 16 chr5 190249096 190249158 -12836374 + L2 LINE L2 3203 3266 -47 255 61 0 0 chr5 190249825 190249858 -12835674 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 286 255 75 24 chr5 190250578 190250702 -12834830 - MIR SINE MIR -20 188 58 368 253 294 0 chr5 190250737 190250883 -12834649 - MER5A DNA MER1_type 0 189 1 2253 106 0 3 chr5 190251319 190251631 -12833901 - AluSx SINE Alu -1 311 1 313 138 17 0 chr5 190251759 190251817 -12833715 + MER113 DNA MER1_type? 30 88 -433 2057 203 53 113 chr5 190251910 190252591 -12832941 - MER21B LTR ERV1 -126 737 98 324 317 0 0 chr5 190252630 190252712 -12832820 - MER21B LTR ERV1 -767 96 15 681 159 0 0 chr5 190252858 190252971 -12832561 - FRAM SINE Alu -26 150 38 827 261 61 11 chr5 190252975 190253236 -12832296 + MER113 DNA MER1_type? 248 521 0 991 265 4 21 chr5 190254311 190254549 -12830983 - MIR SINE MIR -1 261 28 488 320 68 79 chr5 190254685 190255051 -12830481 - L2 LINE L2 0 3272 2911 275 339 127 23 chr5 190255458 190255679 -12829853 + L2 LINE L2 3026 3269 -3 646 254 6 30 chr5 190256229 190256394 -12829138 - MIR SINE MIR 0 262 102 3477 162 52 20 chr5 190256395 190257032 -12828500 + LTR51 LTR ERV1 1 657 -14 1436 248 71 69 chr5 190257045 190257593 -12827939 - LTR38B LTR ERV1 -19 591 47 1884 126 41 3 chr5 190257593 190257886 -12827646 - AluSg SINE Alu -6 304 1 1436 248 71 69 chr5 190257886 190257934 -12827598 - LTR38B LTR ERV1 -563 47 1 225 322 34 0 chr5 190257998 190258057 -12827475 - MIR SINE MIR -200 62 2 754 177 0 15 chr5 190258404 190258534 -12826998 - AluJb SINE Alu -55 257 130 28 0 0 0 chr5 190258537 190258565 -12826967 + AT_rich Low_complexity Low_complexity 1 28 0 652 183 55 30 chr5 190259491 190259655 -12825877 + MIR SINE MIR 74 241 -21 1011 161 0 0 chr5 190259896 190260057 -12825475 + FRAM SINE Alu 1 159 -17 356 291 98 104 chr5 190260129 190260438 -12825094 - L1ME4a LINE L1 -104 6017 5711 2365 88 0 0 chr5 190260438 190260746 -12824786 - AluSx SINE Alu -4 308 1 356 291 98 104 chr5 190260746 190260928 -12824604 - L1ME4a LINE L1 -410 5711 5529 832 297 48 35 chr5 190261410 190261953 -12823579 - L2 LINE L2 -85 3228 2677 3202 215 55 21 chr5 190261973 190262552 -12822980 - L1ME1 LINE L1 0 6166 5522 1773 166 0 10 chr5 190262552 190262848 -12822684 - AluJb SINE Alu -14 298 6 3202 215 55 21 chr5 190262848 190263287 -12822245 - L1ME1 LINE L1 -644 5522 5099 249 277 22 88 chr5 190263320 190263457 -12822075 - MIR SINE MIR -65 143 16 1680 178 3 0 chr5 190263976 190264263 -12821269 - AluJo SINE Alu -16 296 9 430 243 138 57 chr5 190264320 190264530 -12821002 + MIR SINE MIR 5 231 -31 370 113 19 0 chr5 190264815 190264868 -12820664 - AluJb SINE Alu -137 165 112 180 167 117 50 chr5 190264914 190264974 -12820558 + MIR SINE MIR 137 200 -62 453 250 9 23 chr5 190265084 190265219 -12820313 - MIR SINE MIR -46 162 31 328 312 138 35 chr5 190267088 190267252 -12818280 + L2 LINE L2 2706 2852 -420 2096 127 3 3 chr5 190267252 190267544 -12817988 - AluSx SINE Alu -20 292 1 328 312 138 35 chr5 190267544 190267709 -12817823 + L2 LINE L2 2852 3072 -200 1385 169 0 25 chr5 190267755 190267997 -12817535 - MER46A DNA MER2_type 0 236 1 471 281 41 7 chr5 190268379 190268525 -12817007 + L2 LINE L2 3122 3272 0 923 123 97 26 chr5 190269371 190269525 -12816007 - AluSg/x SINE Alu -11 301 137 2464 131 33 30 chr5 190270264 190270691 -12814841 - MSTA LTR MaLR 0 428 1 248 250 189 61 chr5 190270748 190270912 -12814620 - L2 LINE L2 -25 3288 3104 2173 99 3 3 chr5 190271149 190271472 -12814060 - AluSc SINE Alu 0 323 1 2066 152 54 3 chr5 190271979 190272328 -12813204 - MLT1B LTR MaLR 0 390 24 181 355 0 0 chr5 190272591 190272653 -12812879 - L2 LINE L2 -335 2937 2876 240 222 0 0 chr5 190273044 190273089 -12812443 - MLT2C2 LTR ERVL 0 520 476 * 1762 176 14 3 chr5 190273087 190273383 -12812149 - MLT2C2 LTR ERVL -163 301 3 513 251 69 35 chr5 190273768 190273971 -12811561 + MIR SINE MIR 12 221 -41 1753 173 18 0 chr5 190274016 190274328 -12811204 + AluJo SINE Alu 1 317 0 874 245 41 25 chr5 190274331 190274633 -12810899 + MLT1I LTR MaLR 65 370 -39 305 241 28 28 chr5 190275870 190275978 -12809554 + MER113 DNA MER1_type? 5 112 -409 25 0 0 0 chr5 190276049 190276074 -12809458 + AT_rich Low_complexity Low_complexity 1 25 0 317 324 34 27 chr5 190276251 190276399 -12809133 + MIR3 SINE MIR 54 202 -6 954 282 64 88 chr5 190276501 190277004 -12808528 - MLT1K LTR MaLR -14 574 84 412 259 53 30 chr5 190278065 190278196 -12807336 - L2 LINE L2 -2 3270 3137 238 288 141 47 chr5 190279131 190279301 -12806231 - MIR SINE MIR -52 210 25 927 167 12 12 chr5 190280122 190280290 -12805242 + LTR54 LTR ERV1 1 168 -342 212 222 0 16 chr5 190280310 190280373 -12805159 + GA-rich Low_complexity Low_complexity 1 62 0 1776 161 57 20 chr5 190280373 190280726 -12804806 + LTR54 LTR ERV1 145 510 0 1850 155 0 35 chr5 190280927 190281244 -12804288 - AluJb SINE Alu -5 307 2 270 73 0 0 chr5 190282098 190282139 -12803393 + (TATG)n Simple_repeat Simple_repeat 2 42 0 309 277 88 36 chr5 190282805 190282942 -12802590 - MIR SINE MIR -110 152 9 359 292 0 0 chr5 190283884 190283980 -12801552 + MIR SINE MIR 6 101 -161 1097 101 30 6 chr5 190284047 190284186 -12801346 + L1MA2 LINE L1 6132 6277 -27 495 48 0 0 chr5 190284186 190284248 -12801284 + (TG)n Simple_repeat Simple_repeat 1 62 0 1097 101 30 6 chr5 190284248 190284277 -12801255 + L1MA2 LINE L1 6277 6304 0 30 0 0 0 chr5 190284277 190284307 -12801225 + AT_rich Low_complexity Low_complexity 1 30 0 1995 141 0 3 chr5 190284313 190284610 -12800922 + AluSx SINE Alu 2 297 -15 501 283 73 11 chr5 190284850 190285041 -12800491 + MIR SINE MIR 3 205 -57 334 291 119 25 chr5 190285797 190286015 -12799517 + MIR SINE MIR 19 250 -12 245 272 82 86 chr5 190286750 190287029 -12798503 + L2 LINE L2 2950 3227 -45 884 270 17 0 chr5 190287712 190287949 -12797583 - MIR SINE MIR 0 262 22 2120 145 0 0 chr5 190287995 190288299 -12797233 - AluSx SINE Alu -8 304 1 632 312 78 4 chr5 190288318 190288549 -12796983 + MIR SINE MIR 2 249 -13 1908 130 0 63 chr5 190288853 190289168 -12796364 + AluSx SINE Alu 1 295 -17 299 278 73 33 chr5 190289196 190289347 -12796185 + MER103 DNA DNA 3 159 -7 282 280 237 19 chr5 190291722 190291933 -12793599 + MIR SINE MIR 6 262 0 397 255 90 35 chr5 190292686 190292831 -12792701 + MIR SINE MIR 100 252 -10 387 365 5 23 chr5 190292881 190293100 -12792432 - MIR SINE MIR -30 232 18 195 162 0 0 chr5 190293680 190293717 -12791815 + (TG)n Simple_repeat Simple_repeat 1 37 0 218 303 26 13 chr5 190294103 190294179 -12791353 + MIR SINE MIR 11 87 -175 186 191 0 0 chr5 190294337 190294379 -12791153 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 227 178 0 0 chr5 190294381 190294426 -12791106 + LTR66 LTR ERVL 394 438 -172 183 80 0 0 chr5 190295020 190295045 -12790487 + (T)n Simple_repeat Simple_repeat 1 25 0 1757 281 16 20 chr5 190295050 190295595 -12789937 - L1ME3 LINE L1 -1 6161 5619 484 257 68 7 chr5 190296462 190296610 -12788922 - MER103 DNA DNA -7 159 3 2088 111 11 0 chr5 190297210 190297514 -12788018 + AluSx SINE Alu 1 307 0 196 345 30 18 chr5 190297550 190297715 -12787817 - L2 LINE L2 -419 2895 2729 760 263 82 19 chr5 190298889 190299159 -12786373 - MLT1K LTR MaLR -1 587 301 267 158 4 0 chr5 190299301 190299362 -12786170 + FAM SINE Alu 128 175 0 276 109 31 31 chr5 190299857 190299921 -12785611 + CT-rich Low_complexity Low_complexity 1 64 0 1888 116 24 61 chr5 190300153 190300447 -12785085 - AluSc SINE Alu -26 283 1 699 238 108 18 chr5 190301288 190301511 -12784021 - LTR67 LTR ERVL -313 244 2 340 265 84 48 chr5 190301987 190302153 -12783379 + MIR SINE MIR 90 261 -1 683 244 12 78 chr5 190302670 190302912 -12782620 + MIR SINE MIR 8 233 -29 644 254 217 25 chr5 190302973 190303374 -12782158 + L2 LINE L2 2819 3296 -17 278 266 88 35 chr5 190303371 190303484 -12782048 - MIR SINE MIR -94 168 50 * 198 0 0 0 chr5 190304907 190304929 -12780603 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 7248 44 6 3 chr5 190304930 190306000 -12779532 - L1PA6 LINE L1 -1 6153 5084 294 347 83 0 chr5 190306048 190306169 -12779363 - L2 LINE L2 -10 3262 3132 883 162 7 0 chr5 190306378 190306520 -12779012 + AluSg/x SINE Alu 167 309 -1 352 271 88 21 chr5 190306620 190306812 -12778720 - MIR SINE MIR -12 250 46 427 316 149 45 chr5 190307257 190308041 -12777491 - L2 LINE L2 -555 2759 1894 319 268 72 64 chr5 190308958 190309193 -12776339 - L2 LINE L2 0 3313 3077 522 139 271 7 chr5 190309208 190309352 -12776180 + MIR SINE MIR 4 185 -77 23 0 0 0 chr5 190309363 190309386 -12776146 + AT_rich Low_complexity Low_complexity 1 23 0 2215 115 0 0 chr5 190309386 190309673 -12775859 - AluSx SINE Alu -25 287 1 1776 158 54 4 chr5 190310307 190310585 -12774947 - AluJo SINE Alu -20 292 1 2348 130 8 19 chr5 190310629 190310997 -12774535 + THE1B LTR MaLR 1 364 0 2119 122 7 0 chr5 190311257 190311552 -12773980 + AluSx SINE Alu 1 297 -15 204 247 21 21 chr5 190311635 190311728 -12773804 + L2 LINE L2 1963 2055 -1259 555 334 126 13 chr5 190311784 190312245 -12773287 + L2 LINE L2 2170 2682 -632 456 237 79 22 chr5 190312247 190312386 -12773146 - L1M4 LINE L1 -1901 4245 4099 369 307 56 30 chr5 190312474 190312705 -12772827 - L1MEc LINE L1 -4137 2259 2023 499 111 0 0 chr5 190312883 190312964 -12772568 + L1MB2 LINE L1 6091 6171 0 393 323 52 7 chr5 190313143 190313298 -12772234 - HAL1 LINE L1 -970 1537 1376 1029 286 105 74 chr5 190313318 190314512 -12771020 - L1MEc LINE L1 -4886 1319 89 491 348 22 34 chr5 190314528 190314923 -12770609 + L2 LINE L2 2683 3070 -202 184 212 0 0 chr5 190315040 190315073 -12770459 + L2 LINE L2 3218 3250 -22 1842 124 110 110 chr5 190315172 190315599 -12769933 - MSTA LTR MaLR -1 427 1 204 324 40 14 chr5 190316312 190316386 -12769146 - L2 LINE L2 -14 3299 3224 461 346 57 35 chr5 190316535 190316829 -12768703 - L2 LINE L2 -218 3054 2748 3701 182 103 23 chr5 190316829 190317627 -12767905 + MER21B LTR ERV1 1 862 -1 461 346 57 35 chr5 190317627 190317842 -12767690 - L2 LINE L2 -524 2748 2539 1813 157 41 3 chr5 190320249 190320543 -12764989 - AluJb SINE Alu -7 305 1 2415 74 0 23 chr5 190321224 190321534 -12763998 - AluY SINE Alu -8 303 1 219 244 0 0 chr5 190321555 190321600 -12763932 + L2 LINE L2 3217 3261 -11 * 237 175 0 0 chr5 190321561 190321601 -12763931 + MIR SINE MIR 219 258 -4 694 246 118 5 chr5 190321684 190321887 -12763645 - MIR SINE MIR 0 262 37 252 326 205 19 chr5 190322480 190322695 -12762837 - L3b LINE CR1 -27 1556 1302 752 186 0 8 chr5 190322708 190322832 -12762700 + FLAM_A SINE Alu 1 123 -10 267 312 69 32 chr5 190322909 190323098 -12762434 - MIR SINE MIR -10 252 57 375 184 50 7 chr5 190323225 190323366 -12762166 + (TA)n Simple_repeat Simple_repeat 2 148 0 230 326 93 0 chr5 190323580 190323666 -12761866 + MIR SINE MIR 22 115 -93 323 307 16 24 chr5 190323752 190323879 -12761653 + MIR3 SINE MIR 60 185 -23 243 224 13 40 chr5 190323950 190324026 -12761506 - LTR67 LTR ERVL -27 530 457 264 176 148 84 chr5 190324654 190324796 -12760736 + MIR3 SINE MIR 39 189 -19 451 311 111 0 chr5 190324954 190325189 -12760343 + MIR SINE MIR 2 262 0 184 195 49 24 chr5 190325208 190325249 -12760283 - MIR SINE MIR -191 71 30 317 324 0 7 chr5 190325521 190325663 -12759869 + GA-rich Low_complexity Low_complexity 2 142 0 21 36 0 0 chr5 190327588 190327616 -12757916 + AT_rich Low_complexity Low_complexity 1 28 0 298 333 38 27 chr5 190327745 190327928 -12757604 + MER5A DNA MER1_type 4 188 -1 378 345 20 0 chr5 190328243 190328391 -12757141 - MIR SINE MIR -28 234 84 345 366 0 8 chr5 190328977 190329111 -12756421 - MIR SINE MIR -116 146 14 272 284 14 0 chr5 190329688 190329762 -12755770 + GA-rich Low_complexity Low_complexity 1 75 0 344 235 0 0 chr5 190329814 190329882 -12755650 + MIR SINE MIR 74 141 -121 336 333 41 14 chr5 190330400 190330547 -12754985 + MIR SINE MIR 84 234 -28 224 262 27 55 chr5 190330991 190331090 -12754442 + MIR SINE MIR 32 126 -85 249 328 52 43 chr5 190331318 190331434 -12754098 - MIR SINE MIR -141 121 5 281 240 208 10 chr5 190331761 190331857 -12753675 + L2 LINE L2 3188 3302 -11 189 0 0 0 chr5 190331859 190331880 -12753652 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 1643 164 0 80 chr5 190331882 190332206 -12753326 + AluJo SINE Alu 1 298 -14 2239 99 3 0 chr5 190332210 190332502 -12753030 + AluSg SINE Alu 2 294 -16 298 274 0 63 chr5 190332535 190332630 -12752902 - MIR SINE MIR -18 244 156 1407 135 37 20 chr5 190332635 190332880 -12752652 - L1PA8 LINE L1 -20 6152 5904 435 318 70 0 chr5 190332919 190333048 -12752484 - MIR SINE MIR -113 149 12 263 122 20 0 chr5 190333533 190333582 -12751950 + GA-rich Low_complexity Low_complexity 1 50 0 592 271 24 18 chr5 190334147 190334313 -12751219 + MIR SINE MIR 48 214 -48 1409 195 10 34 chr5 190334343 190334693 -12750839 - AluJo SINE Alu 0 312 1 222 286 31 10 chr5 190334732 190334830 -12750702 + (TA)n Simple_repeat Simple_repeat 1 100 0 218 253 23 11 chr5 190334838 190334910 -12750622 + (TAA)n Simple_repeat Simple_repeat 2 77 -12 2111 118 0 10 chr5 190334910 190335216 -12750316 + AluSx SINE Alu 1 303 -9 218 253 23 11 chr5 190335216 190335230 -12750302 + (TAA)n Simple_repeat Simple_repeat 77 89 0 2295 104 3 0 chr5 190336093 190336390 -12749142 + AluSq SINE Alu 1 298 -15 371 234 38 70 chr5 190336713 190336871 -12748661 - MER103 DNA DNA -3 163 11 458 305 159 24 chr5 190337088 190337820 -12747712 + L1ME4a LINE L1 5193 6027 -94 24 0 0 0 chr5 190337919 190337943 -12747589 + AT_rich Low_complexity Low_complexity 1 24 0 440 355 91 5 chr5 190338006 190338226 -12747306 + MIR SINE MIR 5 243 -19 458 303 91 25 chr5 190338698 190338939 -12746593 - MIR SINE MIR 0 262 6 1217 162 9 9 chr5 190339761 190339990 -12745542 - L1MD3 LINE L1 -3 7992 7764 415 298 82 66 chr5 190340005 190340324 -12745208 + L2 LINE L2 2990 3313 0 526 323 55 10 chr5 190340544 190340745 -12744787 + MIR SINE MIR 34 243 -19 327 261 22 11 chr5 190341413 190341505 -12744027 - MER5A DNA MER1_type -5 184 92 343 169 12 60 chr5 190341748 190341831 -12743701 - L1MC4a LINE L1 -1879 5929 5851 584 303 4 44 chr5 190343830 190344058 -12741474 + MIR SINE MIR 12 230 -32 288 0 0 0 chr5 190344294 190344326 -12741206 + (TTG)n Simple_repeat Simple_repeat 2 33 0 404 19 19 0 chr5 190344521 190344574 -12740958 + (CA)n Simple_repeat Simple_repeat 1 54 0 324 319 13 8 chr5 190344605 190344723 -12740809 + MIR SINE MIR 57 178 -63 239 177 16 0 chr5 190345141 190345203 -12740329 + GA-rich Low_complexity Low_complexity 2 64 0 6027 120 55 20 chr5 190345524 190346223 -12739309 - L1PA15 LINE L1 0 6165 5467 1937 123 41 0 chr5 190346223 190346516 -12739016 - AluSq SINE Alu -8 305 1 6027 120 55 20 chr5 190346516 190346895 -12738637 - L1PA15 LINE L1 -698 5467 5102 322 342 43 8 chr5 190346975 190347092 -12738440 + MIR SINE MIR 29 149 -113 453 259 154 49 chr5 190347376 190347642 -12737890 - MLT1I LTR MaLR -14 395 102 235 134 164 30 chr5 190347650 190347717 -12737815 - MLT1J2 LTR MaLR -307 143 68 194 317 37 24 chr5 190347766 190347848 -12737684 - MIR SINE MIR -177 85 3 212 288 14 14 chr5 190348367 190348440 -12737092 + L2 LINE L2 2991 3063 -209 321 298 16 16 chr5 190349049 190349170 -12736362 + MER5A DNA MER1_type 47 167 -22 1720 202 3 16 chr5 190349751 190350058 -12735474 - AluJo SINE Alu -9 303 1 1268 293 48 35 chr5 190350194 190350739 -12734793 - L1ME3A LINE L1 -286 5884 5314 2372 77 3 10 chr5 190350739 190351039 -12734493 - AluSg SINE Alu -12 298 1 1268 293 48 35 chr5 190351039 190351476 -12734056 - L1ME3A LINE L1 -856 5314 4884 186 162 0 27 chr5 190351868 190351905 -12733627 + MIR SINE MIR 25 60 -148 297 269 26 0 chr5 190351926 190352004 -12733528 - MIR SINE MIR 0 262 183 212 283 151 0 chr5 190352009 190352115 -12733417 + MIR3 SINE MIR 81 202 -6 2348 110 45 31 chr5 190353168 190353524 -12732008 + THE1B LTR MaLR 4 364 0 421 264 83 94 chr5 190353746 190354000 -12731532 - MIR SINE MIR -4 258 8 467 274 118 75 chr5 190354186 190354345 -12731187 - Charlie8 DNA MER1_type -1881 536 385 2078 132 0 3 chr5 190354345 190354665 -12730867 - AluSx SINE Alu 0 312 1 467 274 118 75 chr5 190354665 190354877 -12730655 - Charlie8 DNA MER1_type -2032 385 149 46 83 0 0 chr5 190355020 190355129 -12730403 + AT_rich Low_complexity Low_complexity 1 109 0 266 84 14 42 chr5 190355572 190355643 -12729889 + (TA)n Simple_repeat Simple_repeat 1 69 0 1722 184 0 7 chr5 190355643 190355920 -12729612 - AluJo SINE Alu -37 275 1 1981 122 93 42 chr5 190356060 190356414 -12729118 + THE1C LTR MaLR 4 375 0 326 333 22 17 chr5 190357065 190357245 -12728287 + MIR SINE MIR 63 243 -19 388 268 87 29 chr5 190357311 190357449 -12728083 + MIR3 SINE MIR 18 163 -45 222 328 15 37 chr5 190357598 190357732 -12727800 - MIR SINE MIR -13 249 119 242 222 0 0 chr5 190358292 190358346 -12727186 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 336 214 29 0 chr5 190358364 190358434 -12727098 - L1MA7 LINE L1 -356 5935 5864 680 154 18 0 chr5 190358449 190358559 -12726973 + L1MC1 LINE L1 6199 6310 -23 312 219 219 35 chr5 190358624 190358738 -12726794 - MIR3 SINE MIR -60 148 14 405 0 0 0 chr5 190359758 190359803 -12725729 + (TG)n Simple_repeat Simple_repeat 2 46 0 3806 150 29 7 chr5 190360209 190360801 -12724731 - MER6A DNA MER2_type 0 605 1 551 270 81 0 chr5 190360803 190360951 -12724581 + MIR3 SINE MIR 33 192 -16 23 0 0 0 chr5 190361962 190361985 -12723547 + AT_rich Low_complexity Low_complexity 1 23 0 246 350 42 21 chr5 190362192 190362335 -12723197 + L2 LINE L2 2181 2326 -988 237 322 185 7 chr5 190362853 190362999 -12722533 + MIR SINE MIR 85 256 -6 201 212 0 30 chr5 190363003 190363069 -12722463 + (TTA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr5 190363204 190363225 -12722307 + AT_rich Low_complexity Low_complexity 1 21 0 558 314 21 16 chr5 190363765 190363953 -12721579 - MIR3 SINE MIR -3 205 17 946 206 165 16 chr5 190363976 190364345 -12721187 - MER113 DNA MER1_type? -35 486 63 236 311 168 17 chr5 190366115 190366234 -12719298 + MIR SINE MIR 18 154 -108 27 0 0 0 chr5 190366265 190366292 -12719240 + AT_rich Low_complexity Low_complexity 1 27 0 426 155 243 0 chr5 190366300 190366403 -12719129 - L1ME2 LINE L1 -15 6149 6022 656 213 98 12 chr5 190366442 190366606 -12718926 - MIR SINE MIR -11 251 74 328 328 62 0 chr5 190367188 190367316 -12718216 - HAL1b LINE L1 -1212 136 1 252 336 23 16 chr5 190367480 190367608 -12717924 + L2 LINE L2 2272 2400 -914 4251 89 0 23 chr5 190368294 190368866 -12716666 - L1PA13 LINE L1 0 6163 5605 363 303 0 28 chr5 190370260 190370369 -12715163 - MIR3 SINE MIR -93 115 10 270 260 0 14 chr5 190370592 190370665 -12714867 - L2 LINE L2 0 3272 3201 254 285 152 44 chr5 190371110 190371268 -12714264 + MIR SINE MIR 20 194 -68 413 221 29 0 chr5 190371804 190371944 -12713588 + (TATATG)n Simple_repeat Simple_repeat 5 148 0 706 180 8 8 chr5 190371952 190372074 -12713458 - FLAM_A SINE Alu -11 122 1 243 290 0 83 chr5 190372691 190372836 -12712696 + L2 LINE L2 2490 2622 -692 725 219 62 0 chr5 190372842 190373002 -12712530 + MIR SINE MIR 2 171 -91 398 339 57 14 chr5 190373146 190373433 -12712099 + L2 LINE L2 2774 3070 -243 425 267 89 25 chr5 190373662 190373864 -12711668 + LTR16C LTR ERVL 277 491 0 257 254 0 0 chr5 190373947 190374010 -12711522 + (TA)n Simple_repeat Simple_repeat 1 63 0 2427 74 3 0 chr5 190374107 190374405 -12711127 + AluY SINE Alu 1 299 -12 546 133 24 0 chr5 190374412 190374495 -12711037 + FLAM_C SINE Alu 36 120 -23 235 249 138 21 chr5 190376161 190376350 -12709182 - L2 LINE L2 -213 3059 2849 261 182 36 0 chr5 190378191 190378246 -12707286 + L2 LINE L2 3255 3311 -2 1762 169 10 7 chr5 190379272 190379567 -12705965 - AluJo SINE Alu -16 296 1 279 242 0 0 chr5 190379870 190379932 -12705600 - L2 LINE L2 -1 3271 3210 306 290 23 23 chr5 190380135 190380266 -12705266 - LTR67 LTR ERVL 0 557 427 183 156 0 0 chr5 190380370 190380402 -12705130 + T-rich Low_complexity Low_complexity 3 34 0 1795 120 0 129 chr5 190380407 190380764 -12704768 - AluSx SINE Alu -1 311 1 627 236 179 5 chr5 190380782 190380994 -12704538 + MIR SINE MIR 12 260 -2 1506 147 0 0 chr5 190381623 190381841 -12703691 - AluSg/x SINE Alu -11 301 84 371 281 102 40 chr5 190381852 190382126 -12703406 + L1MC4a LINE L1 5667 5957 -1851 333 0 0 0 chr5 190383890 190383927 -12701605 + (TG)n Simple_repeat Simple_repeat 1 37 0 381 276 103 54 chr5 190384044 190384247 -12701285 - MIR SINE MIR -36 226 14 1467 159 6 100 chr5 190384542 190384863 -12700669 + AluJo SINE Alu 1 291 -21 213 39 0 0 chr5 190385749 190385775 -12699757 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 822 90 0 0 chr5 190385775 190385875 -12699657 - AluJb SINE Alu -192 120 21 2234 194 68 40 chr5 190385904 190386561 -12698971 + LTR28 LTR ERV1 10 636 0 307 258 47 55 chr5 190386563 190386691 -12698841 - MER5B DNA MER1_type -49 129 3 383 220 168 81 chr5 190386699 190386872 -12698660 - MER5A DNA MER1_type -1 188 1 2585 55 0 10 chr5 190387001 190387311 -12698221 + AluY SINE Alu 1 307 -4 2020 130 3 10 chr5 190388445 190388745 -12696787 - AluSx SINE Alu -14 298 1 205 372 63 30 chr5 190389150 190389545 -12695987 + L2 LINE L2 2824 3231 -41 1910 172 100 22 chr5 190389835 190390295 -12695237 - LTR54B LTR ERV1 -2 496 1 330 121 0 0 chr5 190390410 190390476 -12695056 + (CA)n Simple_repeat Simple_repeat 2 67 0 274 213 62 0 chr5 190391174 190391254 -12694278 - MIR SINE MIR -98 164 80 270 279 63 0 chr5 190391375 190391454 -12694078 - L2 LINE L2 -4 3309 3226 205 240 40 0 chr5 190391460 190391510 -12694022 + MIR SINE MIR 57 108 -154 3559 124 9 15 chr5 190391510 190392036 -12693496 + MER1A DNA MER1_type 7 529 0 1215 216 13 21 chr5 190392572 190392965 -12692567 - MER63 DNA MER1_type -5 1055 1 2783 234 48 8 chr5 190393449 190394152 -12691380 + L1MC4a LINE L1 6079 6242 0 379 229 51 42 chr5 190394945 190395063 -12690469 - MER96B DNA MER1_type? -6 411 293 * 668 134 37 73 chr5 190395060 190395224 -12690308 - MER96B DNA MER1_type? -257 160 3 1320 97 34 5 chr5 190396144 190396351 -12689181 - L1MA2 LINE L1 0 6304 6092 259 309 0 0 chr5 190396382 190396437 -12689095 + Charlie8 DNA MER1_type 12 66 -2351 282 313 0 0 chr5 190396811 190396891 -12688641 - L2 LINE L2 -10 3262 3183 182 304 9 61 chr5 190397205 190397320 -12688212 + L2 LINE L2 3162 3270 -2 418 301 65 16 chr5 190397708 190397831 -12687701 + L2 LINE L2 3134 3262 -10 254 299 113 10 chr5 190397857 190397954 -12687578 + MIR SINE MIR 20 126 -136 247 254 0 0 chr5 190398159 190398214 -12687318 + MIR SINE MIR 50 104 -104 1075 159 0 0 chr5 190398612 190398782 -12686750 + AluSp SINE Alu 134 303 -10 1642 197 0 0 chr5 190398801 190399085 -12686447 + AluJo SINE Alu 12 295 -17 43672 53 2 1 chr5 190399096 190405227 -12680305 + L1PA5 LINE L1 11 6147 -7 192 97 0 0 chr5 190405277 190405308 -12680224 + (A)n Simple_repeat Simple_repeat 1 31 0 231 152 0 0 chr5 190405514 190405560 -12679972 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 187 260 130 39 chr5 190406393 190406470 -12679062 + L2 LINE L2 3154 3237 -35 351 307 24 66 chr5 190406483 190406649 -12678883 - MER5B DNA MER1_type -19 159 1 254 281 49 12 chr5 190408297 190408379 -12677153 - L2 LINE L2 -31 3282 3198 625 284 49 13 chr5 190409546 190409771 -12675761 + MIR SINE MIR 21 253 -9 311 276 86 0 chr5 190409806 190409922 -12675610 + MIR SINE MIR 131 256 -6 246 309 22 43 chr5 190411062 190411201 -12674331 + MIR SINE MIR 121 256 -6 193 203 79 21 chr5 190411225 190411318 -12674214 - MIR SINE MIR -70 138 86 614 276 67 32 chr5 190412754 190413051 -12672481 + HAL1 LINE L1 11 379 -2128 1074 299 26 3 chr5 190413064 190413408 -12672124 + HAL1 LINE L1 441 792 -1715 319 227 27 0 chr5 190413493 190413568 -12671964 + HAL1 LINE L1 716 792 -1715 328 213 27 0 chr5 190413573 190413648 -12671884 + HAL1 LINE L1 716 792 -1715 323 227 27 0 chr5 190413653 190413728 -12671804 + HAL1 LINE L1 716 792 -1715 330 227 27 0 chr5 190413733 190413808 -12671724 + HAL1 LINE L1 716 792 -1715 328 213 27 0 chr5 190413813 190413888 -12671644 + HAL1 LINE L1 716 792 -1715 330 227 27 0 chr5 190413893 190413968 -12671564 + HAL1 LINE L1 716 792 -1715 323 240 27 0 chr5 190414053 190414128 -12671404 + HAL1 LINE L1 716 792 -1715 459 266 79 44 chr5 190414133 190414475 -12671057 + HAL1 LINE L1 716 1069 -1438 591 261 50 103 chr5 190414525 190414711 -12670821 + HAL1 LINE L1 2069 2263 -244 2199 109 24 0 chr5 190414711 190415005 -12670527 - AluSx SINE Alu -11 301 1 591 261 50 103 chr5 190415005 190415210 -12670322 + HAL1 LINE L1 2263 2434 -73 1937 142 24 10 chr5 190415210 190415506 -12670026 - AluJb SINE Alu -12 300 1 591 261 50 103 chr5 190415506 190415577 -12669955 + HAL1 LINE L1 2434 2507 0 489 264 92 75 chr5 190415609 190416064 -12669468 - LTR37B LTR ERV1 0 468 6 907 217 47 43 chr5 190416067 190416367 -12669165 + MER113 DNA MER1_type? 178 478 -43 692 260 32 23 chr5 190417006 190417228 -12668304 - MIR SINE MIR -6 256 34 563 227 162 0 chr5 190417720 190417905 -12667627 + MIR SINE MIR 30 244 -18 206 274 16 0 chr5 190418542 190418604 -12666928 - L2 LINE L2 -9 3304 3242 194 284 136 57 chr5 190418664 190418752 -12666780 + MER5B DNA MER1_type 25 119 -59 262 293 94 38 chr5 190418807 190418913 -12666619 - MIR SINE MIR -57 151 40 603 258 115 6 chr5 190419210 190419392 -12666140 + LTR33A LTR ERVL 267 468 -55 191 264 38 94 chr5 190419419 190419456 -12666076 - MIR SINE MIR -73 135 97 2575 141 26 7 chr5 190419456 190419874 -12665658 - MSTA LTR MaLR 0 428 3 191 264 38 94 chr5 190419874 190419942 -12665590 - MIR SINE MIR -111 97 36 443 194 9 0 chr5 190420011 190420119 -12665413 + (ATG)n Simple_repeat Simple_repeat 2 110 0 243 208 19 0 chr5 190420900 190420953 -12664579 - Charlie8 DNA MER1_type 0 2417 2364 350 207 46 0 chr5 190420960 190421047 -12664485 + L2 LINE L2 2716 2806 -508 648 238 60 35 chr5 190421126 190421408 -12664124 + L2 LINE L2 3025 3313 0 486 271 11 51 chr5 190421456 190421633 -12663899 - Charlie8 DNA MER1_type -2205 212 43 1760 127 0 8 chr5 190421803 190422055 -12663477 - AluSx SINE Alu -2 310 61 286 346 26 7 chr5 190422552 190422705 -12662827 + L2 LINE L2 2872 3027 -245 1680 61 5 0 chr5 190422783 190423006 -12662526 + AluY SINE Alu 86 309 0 2656 213 29 3 chr5 190423006 190423602 -12661930 - L1MB8 LINE L1 -6 6172 5562 2488 157 15 10 chr5 190423609 190424010 -12661522 - LTR57 LTR ERVL -7 404 2 839 202 75 0 chr5 190424010 190424208 -12661324 - L1MB8 LINE L1 -618 5566 5352 229 263 20 40 chr5 190424272 190424371 -12661161 + MIR SINE MIR 128 224 -38 288 316 143 8 chr5 190424830 190424963 -12660569 + L2 LINE L2 3121 3271 -1 243 295 0 0 chr5 190426034 190426129 -12659403 - L1MC4 LINE L1 -1333 6709 6615 5144 122 11 1 chr5 190426162 190426918 -12658614 - L1PB3 LINE L1 -3 6151 5389 581 241 40 11 chr5 190427145 190427319 -12658213 + MER117 DNA MER1_type 11 189 -8 394 157 159 0 chr5 190427509 190427621 -12657911 - MER104 DNA Tc2 0 180 36 220 269 100 31 chr5 190427687 190427817 -12657715 - MIR SINE MIR -98 164 26 501 281 22 0 chr5 190428729 190428864 -12656668 - MIR SINE MIR -121 141 4 233 283 113 43 chr5 190429595 190429825 -12655707 - MIR SINE MIR -2 260 15 262 254 0 15 chr5 190429894 190429961 -12655571 + (TG)n Simple_repeat Simple_repeat 2 67 0 201 147 0 0 chr5 190430993 190431027 -12654505 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2272 144 22 3 chr5 190431058 190431426 -12654106 - THE1C LTR MaLR 0 375 1 192 125 0 0 chr5 190431529 190431561 -12653971 + (GA)n Simple_repeat Simple_repeat 2 33 0 361 322 28 14 chr5 190432005 190432148 -12653384 + MIR SINE MIR 118 262 0 2082 147 73 6 chr5 190432411 190432752 -12652780 + THE1B LTR MaLR 1 364 0 2387 69 40 13 chr5 190433260 190433563 -12651969 - AluY SINE Alu 0 311 1 2085 132 7 0 chr5 190433629 190433924 -12651608 - AluSx SINE Alu -15 297 1 188 259 148 12 chr5 190434022 190434103 -12651429 - MIR SINE MIR -96 112 21 526 269 36 36 chr5 190434441 190434660 -12650872 + MIR SINE MIR 1 219 -43 185 330 97 32 chr5 190434772 190435051 -12650481 - L2 LINE L2 -340 2974 2678 2165 136 35 32 chr5 190435267 190435641 -12649891 - THE1C LTR MaLR 0 375 1 192 77 0 0 chr5 190437177 190437203 -12648329 + (A)n Simple_repeat Simple_repeat 1 26 0 281 287 65 103 chr5 190437854 190438164 -12647368 - L2 LINE L2 -338 2976 2685 1710 162 3 40 chr5 190438164 190438461 -12647071 + AluJo SINE Alu 1 286 -26 281 287 65 103 chr5 190438461 190438579 -12646953 - L2 LINE L2 -629 2685 2564 187 324 148 19 chr5 190439173 190439281 -12646251 + MIR3 SINE MIR 81 202 -6 1695 172 37 0 chr5 190439402 190439699 -12645833 - AluJo SINE Alu 0 312 5 260 255 41 51 chr5 190439917 190440015 -12645517 - MIR SINE MIR -132 130 34 966 252 42 16 chr5 190440054 190440360 -12645172 - MER113 DNA MER1_type? -3 518 205 246 62 0 0 chr5 190441359 190441391 -12644141 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 306 306 5 32 chr5 190443984 190444146 -12641386 + MIR SINE MIR 34 192 -70 455 255 7 65 chr5 190444288 190444441 -12641091 + MIR SINE MIR 119 262 0 290 282 32 0 chr5 190445802 190445906 -12639626 + MIR SINE MIR 79 190 -63 392 271 42 0 chr5 190445954 190446072 -12639460 - L2 LINE L2 -2 3270 3148 2562 130 42 22 chr5 190446198 190446605 -12638927 - MER21A LTR ERV1 0 931 517 1348 101 80 34 chr5 190446613 190446850 -12638682 - MER21A LTR ERV1 -660 271 24 736 75 52 33 chr5 190446852 190447123 -12638409 + (TCTA)n Simple_repeat Simple_repeat 1 276 0 214 378 0 0 chr5 190447591 190447665 -12637867 - L2 LINE L2 -31 3241 3168 1756 174 3 10 chr5 190447921 190448215 -12637317 + AluJo SINE Alu 1 292 -20 259 301 24 16 chr5 190448325 190448448 -12637084 + MIR SINE MIR 2 125 -137 958 107 0 0 chr5 190450050 190450190 -12635342 - L1PA4 LINE L1 -3 6152 6013 1878 170 14 22 chr5 190450294 190450658 -12634874 - MLT1A1 LTR MaLR 0 365 5 721 267 48 0 chr5 190450856 190451066 -12634466 - MIR SINE MIR -12 250 31 587 240 121 3 chr5 190452214 190452427 -12633105 + MIR SINE MIR 33 262 0 2382 99 7 0 chr5 190453575 190453877 -12631655 + AluSx SINE Alu 1 304 -8 315 317 24 0 chr5 190454661 190454784 -12630748 + MER5A DNA MER1_type 42 167 -22 265 313 40 13 chr5 190454665 190454815 -12630717 - MER5A DNA MER1_type -35 154 1 * 288 239 87 0 chr5 190455062 190455154 -12630378 + MIR SINE MIR 91 190 -72 1791 173 137 17 chr5 190455354 190455776 -12629756 - MLT1D LTR MaLR -28 477 5 201 39 0 0 chr5 190457100 190457126 -12628406 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 1412 232 18 42 chr5 190457686 190458139 -12627393 + MER113 DNA MER1_type? 6 447 -74 348 242 30 20 chr5 190459161 190459260 -12626272 - MIR3 SINE MIR -6 202 103 232 282 94 12 chr5 190460157 190460242 -12625290 - MIR SINE MIR -92 116 25 339 284 52 45 chr5 190464656 190464811 -12620721 + L2 LINE L2 3158 3313 0 240 188 125 0 chr5 190465033 190465097 -12620435 - MIR SINE MIR 0 262 191 710 212 6 12 chr5 190465099 190465269 -12620263 - MIR SINE MIR -3 259 91 464 259 187 12 chr5 190465294 190465460 -12620072 - MIR SINE MIR -62 200 6 421 101 0 21 chr5 190465562 190465633 -12619899 + THE1B LTR MaLR 296 356 -8 218 347 20 10 chr5 190465874 190465972 -12619560 - L3 LINE CR1 -52 1525 1427 185 217 183 0 chr5 190466059 190466119 -12619413 - MIR SINE MIR -72 190 120 583 310 41 12 chr5 190466317 190466559 -12618973 - MIR SINE MIR -1 261 13 494 245 25 25 chr5 190466745 190466904 -12618628 - L1ME4a LINE L1 -4 6117 5959 511 294 59 44 chr5 190466952 190467452 -12618080 - L1MC4a LINE L1 -327 5794 5373 196 314 52 9 chr5 190468070 190468228 -12617304 + MIR SINE MIR 13 220 -42 1188 215 5 0 chr5 190469061 190469284 -12616248 - MER58A DNA MER1_type 0 224 1 195 306 28 0 chr5 190469488 190469560 -12615972 - MIR SINE MIR -112 150 77 544 270 103 79 chr5 190470200 190470650 -12614882 + L2 LINE L2 2508 2977 -337 2142 115 0 40 chr5 190471147 190471470 -12614062 + AluSg SINE Alu 1 310 0 210 301 0 0 chr5 190471653 190471726 -12613806 - MIR3 SINE MIR -24 184 112 214 290 16 0 chr5 190471775 190471837 -12613695 + L2 LINE L2 3201 3263 -9 183 254 14 70 chr5 190471838 190471909 -12613623 - MIR SINE MIR -110 98 32 210 295 26 0 chr5 190472289 190472367 -12613165 + T-rich Low_complexity Low_complexity 5 84 0 * 308 287 6 55 chr5 190472336 190472517 -12613015 + CT-rich Low_complexity Low_complexity 5 176 0 198 0 0 0 chr5 190472683 190472705 -12612827 + (CTG)n Simple_repeat Simple_repeat 1 22 0 311 248 72 40 chr5 190473560 190473685 -12611847 - MIR SINE MIR -46 216 88 184 296 0 0 chr5 190474137 190474181 -12611351 + L2 LINE L2 3211 3254 -18 192 135 39 19 chr5 190474699 190474751 -12610781 + CT-rich Low_complexity Low_complexity 2 54 0 333 169 42 14 chr5 190475195 190475266 -12610266 + MIR SINE MIR 76 148 -60 636 260 14 102 chr5 190475786 190476071 -12609461 + MIR SINE MIR 3 262 0 322 290 110 69 chr5 190476593 190476639 -12608893 + L3 LINE CR1 1158 1201 -376 1991 133 0 20 chr5 190476639 190476933 -12608599 - AluSc SINE Alu -21 288 1 322 290 110 69 chr5 190476933 190477203 -12608329 + L3 LINE CR1 1201 1487 -90 672 241 0 0 chr5 190477804 190477949 -12607583 + MIR SINE MIR 15 159 -103 306 0 0 0 chr5 190477973 190478007 -12607525 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1040 250 5 0 chr5 190478085 190478301 -12607231 - MER58A DNA MER1_type 0 224 8 257 239 109 51 chr5 190478477 190478615 -12606917 + MIR SINE MIR 109 254 -8 249 294 0 0 chr5 190479527 190479578 -12605954 - L2 LINE L2 -20 3252 3202 199 321 24 24 chr5 190479726 190479810 -12605722 - L2 LINE L2 -232 3040 2957 283 308 83 56 chr5 190480319 190480751 -12604781 - L2 LINE L2 -11 3302 2859 180 200 0 0 chr5 190480863 190480903 -12604629 + (TG)n Simple_repeat Simple_repeat 2 41 0 476 257 66 7 chr5 190480926 190481078 -12604454 - L2 LINE L2 -604 2710 2550 312 271 234 9 chr5 190481711 190481925 -12603607 - MIR SINE MIR 0 262 1 239 319 121 0 chr5 190482130 190482246 -12603286 - L2 LINE L2 -4 3268 3139 2464 81 0 0 chr5 190482262 190482559 -12602973 + AluSc SINE Alu 1 297 -12 1023 138 0 75 chr5 190482586 190482774 -12602758 + FAM SINE Alu 1 49 0 2233 89 31 3 chr5 190483264 190483557 -12601975 + AluSx SINE Alu 3 303 -9 597 245 38 33 chr5 190484347 190484559 -12600973 + MIR SINE MIR 20 232 -30 612 214 154 57 chr5 190484579 190484878 -12600654 - MER102a DNA MER1_type -1 329 2 278 254 0 14 chr5 190485575 190485646 -12599886 - L2 LINE L2 0 3313 3244 188 220 0 20 chr5 190485699 190485749 -12599783 + MIR SINE MIR 117 165 -97 24 32 0 0 chr5 190485898 190485929 -12599603 + AT_rich Low_complexity Low_complexity 1 31 0 779 174 0 8 chr5 190485948 190486080 -12599452 - FLAM_C SINE Alu -11 132 2 559 182 45 0 chr5 190486385 190486495 -12599037 - L2 LINE L2 -6 3307 3193 593 260 40 18 chr5 190486954 190487181 -12598351 - MIR SINE MIR 0 262 31 961 86 25 80 chr5 190487181 190487344 -12598188 + MER20 DNA MER1_type 1 154 -65 1183 121 0 0 chr5 190488150 190488315 -12597217 - AluSg/x SINE Alu -1 309 145 357 227 126 8 chr5 190488315 190488434 -12597098 - MIR SINE MIR -65 197 65 695 191 151 0 chr5 190488624 190488776 -12596756 - MER3 DNA MER1_type -1 208 34 227 278 143 53 chr5 190488974 190489107 -12596425 - MIR SINE MIR -78 184 40 24 0 0 0 chr5 190490576 190490600 -12594932 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr5 190491657 190491689 -12593843 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 355 170 0 0 chr5 190491691 190491744 -12593788 - FLAM_A SINE Alu -19 114 62 226 50 50 0 chr5 190492050 190492090 -12593442 + (TG)n Simple_repeat Simple_repeat 1 42 0 224 260 28 14 chr5 190493379 190493463 -12592069 - MIR SINE MIR -65 143 67 296 238 71 48 chr5 190493800 190493926 -12591606 - L2 LINE L2 0 3313 3185 538 270 97 68 chr5 190493987 190494298 -12591234 + MER102a DNA MER1_type 11 330 0 310 318 12 0 chr5 190494834 190494919 -12590613 - MIR3 SINE MIR -46 162 77 405 0 0 0 chr5 190495006 190495051 -12590481 + (CA)n Simple_repeat Simple_repeat 2 46 0 211 146 24 0 chr5 190495051 190495092 -12590440 + GA-rich Low_complexity Low_complexity 1 42 0 708 202 244 0 chr5 190495908 190496101 -12589431 + MIR SINE MIR 2 241 -21 718 289 66 0 chr5 190496148 190496390 -12589142 - MIR SINE MIR 0 262 5 375 269 120 0 chr5 190497655 190497763 -12587769 - MER94 DNA DNA -2 132 12 338 274 121 0 chr5 190497774 190497931 -12587601 + L1ME LINE L1 5617 5792 -378 2160 113 11 0 chr5 190498083 190498367 -12587165 + AluSx SINE Alu 3 289 -23 278 296 56 9 chr5 190498649 190498757 -12586775 - MIR SINE MIR -76 132 20 440 292 43 38 chr5 190499469 190499678 -12585854 - MIR SINE MIR -51 211 2 356 219 164 31 chr5 190500959 190501087 -12584445 - MER103 DNA DNA 0 166 22 274 214 87 79 chr5 190502082 190502208 -12583324 - MIR SINE MIR -62 146 20 416 364 31 4 chr5 190502376 190502604 -12582928 - MIR SINE MIR -21 241 8 369 208 37 27 chr5 190502687 190502812 -12582720 + L1ME4a LINE L1 1222 6110 -7 243 0 0 0 chr5 190502938 190502965 -12582567 + (CA)n Simple_repeat Simple_repeat 1 27 0 285 226 98 29 chr5 190503036 190503138 -12582394 + MIR SINE MIR 84 192 -70 204 286 0 0 chr5 190504671 190504713 -12580819 + MIR3 SINE MIR 114 155 -53 1980 120 0 0 chr5 190504790 190505057 -12580475 + AluSg SINE Alu 39 305 -5 533 230 88 44 chr5 190505064 190505268 -12580264 + MIR SINE MIR 47 259 -3 407 271 117 123 chr5 190506210 190506746 -12578786 - L2 LINE L2 0 3313 2783 545 181 278 0 chr5 190506771 190506915 -12578617 - MER5A DNA MER1_type -5 184 1 2496 68 0 0 chr5 190507072 190507365 -12578167 - AluY SINE Alu -18 293 1 1789 159 48 0 chr5 190508904 190509021 -12576511 + AluJb SINE Alu 1 111 -201 180 0 0 0 chr5 190509021 190509041 -12576491 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1789 159 48 0 chr5 190509041 190509212 -12576320 + AluJb SINE Alu 111 303 -9 314 254 50 104 chr5 190509260 190509421 -12576111 + MER3 DNA MER1_type 2 152 -57 2109 103 3 7 chr5 190509421 190509739 -12575793 - AluSc SINE Alu 0 317 1 314 254 50 104 chr5 190509739 190509777 -12575755 + MER3 DNA MER1_type 152 191 -18 334 333 75 5 chr5 190510993 190511179 -12574353 + MIR SINE MIR 35 233 -29 627 249 77 18 chr5 190511382 190511603 -12573929 - L2 LINE L2 0 3313 3080 429 215 161 13 chr5 190512725 190512874 -12572658 - MER5B DNA MER1_type 0 178 8 451 335 19 5 chr5 190514011 190514223 -12571309 + MIR SINE MIR 47 261 -1 289 178 107 13 chr5 190515822 190515918 -12569614 - MIR SINE MIR -65 143 48 189 0 0 0 chr5 190516028 190516049 -12569483 + (T)n Simple_repeat Simple_repeat 1 21 0 813 208 15 55 chr5 190516541 190516743 -12568789 + MER58A DNA MER1_type 30 223 -1 406 291 85 16 chr5 190516769 190516958 -12568574 + MIR SINE MIR 47 248 -14 417 221 53 0 chr5 190516985 190517116 -12568416 - MIR SINE MIR -1 261 124 229 314 162 0 chr5 190517505 190517610 -12567922 - L2 LINE L2 0 3272 3151 195 129 0 0 chr5 190517658 190517689 -12567843 + (T)n Simple_repeat Simple_repeat 1 31 0 6355 135 70 3 chr5 190517735 190518342 -12567190 - Tigger3b DNA MER2_type -1797 1231 666 2496 80 0 3 chr5 190518342 190518653 -12566879 - AluY SINE Alu -1 310 1 6355 135 70 3 chr5 190518653 190519131 -12566401 - Tigger3b DNA MER2_type -2362 666 73 295 339 85 0 chr5 190519274 190519439 -12566093 - MIR SINE MIR -21 241 63 707 194 138 56 chr5 190519720 190519818 -12565714 + MER20 DNA MER1_type 8 97 -122 3766 112 31 0 chr5 190519818 190520327 -12565205 - MER1A DNA MER1_type 0 527 3 707 194 138 56 chr5 190520327 190520424 -12565108 + MER20 DNA MER1_type 97 219 0 221 294 29 0 chr5 190520446 190520514 -12565018 - L2 LINE L2 -69 3203 3134 1291 142 55 0 chr5 190520645 190520863 -12564669 - AluSp SINE Alu 0 313 84 338 299 130 29 chr5 190520904 190521212 -12564320 - L2 LINE L2 -344 2970 2632 190 271 150 30 chr5 190522318 190522451 -12563081 + MIR SINE MIR 111 259 -3 435 253 159 55 chr5 190522814 190523103 -12562429 + MER102a DNA MER1_type 4 322 -8 990 191 11 0 chr5 190523114 190523297 -12562235 + MER5A DNA MER1_type 1 185 -4 182 311 106 62 chr5 190523311 190523472 -12562060 + MIR3 SINE MIR 19 186 -22 344 267 107 13 chr5 190523477 190523636 -12561896 - MIR SINE MIR -2 260 88 332 245 118 10 chr5 190524025 190524127 -12561405 + MIR SINE MIR 85 197 -65 214 274 27 27 chr5 190524645 190524718 -12560814 + MIR SINE MIR 79 151 -111 484 289 21 32 chr5 190524898 190525088 -12560444 - MIR SINE MIR -13 249 62 297 109 0 0 chr5 190526002 190526048 -12559484 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 580 308 100 25 chr5 190526054 190526453 -12559079 - L2 LINE L2 -20 3293 2865 501 282 111 9 chr5 190526477 190526693 -12558839 - MIR SINE MIR -24 238 1 441 229 68 52 chr5 190526802 190526994 -12558538 - MIR SINE MIR -12 250 56 416 193 193 90 chr5 190527615 190527827 -12557705 - L2 LINE L2 0 3313 3080 247 250 0 0 chr5 190527858 190527911 -12557621 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 220 308 0 0 chr5 190528003 190528055 -12557477 + polypyrimidine Low_complexity Low_complexity 2 53 0 1034 171 6 0 chr5 190528063 190528227 -12557305 - FRAM SINE Alu -12 164 1 236 272 151 42 chr5 190528642 190528881 -12556651 - L2 LINE L2 -4 3268 3004 693 223 132 5 chr5 190529623 190529843 -12555689 + MIR SINE MIR 14 261 -1 615 274 107 68 chr5 190530312 190530677 -12554855 + Charlie8 DNA MER1_type 13 391 -2026 569 296 18 22 chr5 190531175 190531401 -12554131 - MIR SINE MIR -36 226 2 201 250 0 0 chr5 190532278 190532326 -12553206 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 2290 94 0 36 chr5 190532491 190532798 -12552734 + AluSg SINE Alu 1 296 -14 251 296 40 92 chr5 190532803 190532955 -12552577 + MIR3 SINE MIR 19 162 -46 493 275 190 0 chr5 190533248 190533459 -12552073 + MIR SINE MIR 5 255 -7 256 341 12 0 chr5 190534008 190534093 -12551439 - MIR3 SINE MIR -30 178 93 188 200 0 0 chr5 190534781 190534816 -12550716 - L2 LINE L2 -14 3258 3224 225 233 0 0 chr5 190534833 190534876 -12550656 + GA-rich Low_complexity Low_complexity 4 46 0 352 300 22 8 chr5 190535095 190535233 -12550299 + MIR SINE MIR 36 173 -63 514 294 31 0 chr5 190535498 190535658 -12549874 + MIR3 SINE MIR 19 183 -25 180 304 0 0 chr5 190535897 190535953 -12549579 + L3b LINE CR1 1333 1388 -195 268 206 247 0 chr5 190536559 190536656 -12548876 + L2 LINE L2 3193 3313 0 634 300 0 0 chr5 190536687 190536871 -12548661 + MIR SINE MIR 74 256 -6 327 240 52 10 chr5 190536903 190536999 -12548533 - MIR SINE MIR -79 183 84 1969 95 85 11 chr5 190538560 190538843 -12546689 + AluSc SINE Alu 1 304 -5 426 339 35 20 chr5 190538881 190539135 -12546397 + L3 LINE CR1 1306 1563 -14 1011 201 81 40 chr5 190540128 190540382 -12545150 + Tigger7 DNA MER2_type 3 2422 -69 233 265 60 12 chr5 190540400 190540483 -12545049 + Tigger7 DNA MER2_type 2401 2487 0 207 225 0 0 chr5 190540741 190540812 -12544720 + (AATTG)n Simple_repeat Simple_repeat 1 71 0 448 252 47 47 chr5 190540925 190541139 -12544393 - L2 LINE L2 -5 3308 3095 2381 105 0 3 chr5 190541145 190541458 -12544074 + AluSx SINE Alu 1 312 0 630 258 110 56 chr5 190541573 190541999 -12543533 - L2 LINE L2 -578 2736 2288 740 232 28 0 chr5 190543243 190543424 -12542108 - MER5A DNA MER1_type -3 186 1 477 333 22 18 chr5 190544137 190544359 -12541173 + MIR SINE MIR 33 255 -7 220 278 19 0 chr5 190544402 190544456 -12541076 + L2 LINE L2 3133 3187 -85 250 258 0 0 chr5 190544472 190544534 -12540998 - L2 LINE L2 0 3272 3211 439 205 0 0 chr5 190544711 190544814 -12540718 - MER5A DNA MER1_type -83 106 4 248 268 4 18 chr5 190544865 190544943 -12540589 - MIR SINE MIR -74 134 60 285 238 16 0 chr5 190544989 190545052 -12540480 + MER5B DNA MER1_type 1 64 -114 207 167 0 0 chr5 190545066 190545102 -12540430 - MER5B DNA MER1_type -139 39 4 522 287 107 0 chr5 190545181 190545331 -12540201 - MIR3 SINE MIR -9 199 34 210 209 173 45 chr5 190546057 190546167 -12539365 - MIR3 SINE MIR -48 160 37 359 229 0 76 chr5 190546460 190546578 -12538954 - L2 LINE L2 0 3313 3205 728 268 75 83 chr5 190546816 190547537 -12537995 - L2 LINE L2 -341 2973 2259 242 250 223 27 chr5 190547815 190547927 -12537605 - L2 LINE L2 -20 3252 3119 1468 202 4 4 chr5 190548349 190548611 -12536921 + AluJb SINE Alu 34 295 -17 2259 124 0 0 chr5 190548612 190548919 -12536613 + AluSx SINE Alu 1 307 -5 243 167 150 0 chr5 190549108 190549153 -12536379 - MER102b DNA MER1_type -17 324 271 333 122 20 0 chr5 190549153 190549202 -12536330 + MER81 DNA DNA 1 50 -64 589 323 10 5 chr5 190549299 190549491 -12536041 - MER102b DNA MER1_type -148 193 1 221 245 0 0 chr5 190549983 190550036 -12535496 + MIR SINE MIR 85 137 -71 643 286 11 17 chr5 190551393 190551568 -12533964 - MER117 DNA MER1_type -18 179 6 927 225 53 5 chr5 190551777 190551986 -12533546 - MER20 DNA MER1_type 0 219 1 784 29 19 0 chr5 190551988 190552091 -12533441 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 201 298 0 0 chr5 190552140 190552197 -12533335 + L2 LINE L2 3255 3311 -2 396 286 58 16 chr5 190552863 190553052 -12532480 - MIR SINE MIR -19 243 47 204 250 0 0 chr5 190553293 190553357 -12532175 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 234 187 99 117 chr5 190553358 190553529 -12532003 + HAL1b LINE L1 1165 1332 -16 327 294 92 18 chr5 190553594 190553757 -12531775 + MIR SINE MIR 86 260 -2 1037 266 82 48 chr5 190554801 190555370 -12530162 + L2 LINE L2 2733 3313 0 188 319 32 11 chr5 190555576 190555670 -12529862 - L2 LINE L2 -7 3306 3211 268 367 47 18 chr5 190555704 190555873 -12529659 + MIR SINE MIR 18 191 -71 682 235 84 1 chr5 190556903 190557105 -12528427 - MIR SINE MIR -44 218 1 197 317 37 0 chr5 190557106 190557188 -12528344 + L2 LINE L2 3190 3274 -39 195 42 0 0 chr5 190557819 190557843 -12527689 + (TG)n Simple_repeat Simple_repeat 1 24 0 249 180 0 0 chr5 190560028 190560078 -12525454 + (CA)n Simple_repeat Simple_repeat 2 51 0 260 321 12 12 chr5 190560448 190560532 -12525000 + MER45 DNA AcHobo 2 85 -955 268 266 16 0 chr5 190560537 190560601 -12524931 + MER45 DNA AcHobo 1517 1581 0 1594 123 63 4 chr5 190560794 190561047 -12524485 + Tigger1 DNA MER2_type 1 268 -2150 2389 116 13 42 chr5 190561056 190561437 -12524095 + Tigger1 DNA MER2_type 2049 2418 0 227 217 29 43 chr5 190562365 190562434 -12523098 + L2 LINE L2 3203 3270 -2 559 252 138 14 chr5 190562764 190562982 -12522550 + MIR SINE MIR 18 262 0 356 315 48 6 chr5 190563818 190563983 -12521549 - MIR SINE MIR -1 261 90 2017 114 48 0 chr5 190564362 190564652 -12520880 - AluSc SINE Alu -5 304 1 474 18 0 0 chr5 190564798 190564853 -12520679 + (TG)n Simple_repeat Simple_repeat 1 55 0 41 21 0 0 chr5 190565653 190565701 -12519831 + AT_rich Low_complexity Low_complexity 1 48 0 542 232 92 0 chr5 190565707 190565849 -12519683 + MER103 DNA DNA 6 160 -6 1429 283 58 39 chr5 190566388 190566957 -12518575 - MLT1K LTR MaLR -6 582 3 498 221 111 58 chr5 190567297 190567505 -12518027 + MIR SINE MIR 29 247 -15 525 282 31 10 chr5 190567711 190567906 -12517626 - MIR SINE MIR -1 261 63 182 37 37 0 chr5 190567937 190567964 -12517568 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1961 108 4 0 chr5 190567966 190568226 -12517306 - AluSp SINE Alu -17 296 36 221 191 24 0 chr5 190568252 190568294 -12517238 - MIR SINE MIR -89 119 77 659 247 12 6 chr5 190569135 190569305 -12516227 + MIR SINE MIR 92 262 0 2257 132 0 0 chr5 190569538 190569848 -12515684 - AluSx SINE Alu -2 310 1 269 249 183 41 chr5 190570401 190570598 -12514934 - MIR SINE MIR 0 262 38 480 291 45 15 chr5 190571202 190571401 -12514131 + MIR SINE MIR 15 219 -43 197 305 74 42 chr5 190571513 190571608 -12513924 + MIR SINE MIR 14 111 -151 2344 78 3 0 chr5 190571929 190572212 -12513320 - AluSg SINE Alu -26 284 1 330 313 30 30 chr5 190572863 190572997 -12512535 - MIR SINE MIR -80 182 49 243 0 0 0 chr5 190572999 190573026 -12512506 + (TG)n Simple_repeat Simple_repeat 2 28 0 498 297 33 28 chr5 190573207 190573389 -12512143 + LTR16C LTR ERVL 97 279 -212 714 236 47 106 chr5 190573399 190573785 -12511747 - L2 LINE L2 -819 2495 2133 1979 137 7 0 chr5 190574472 190574778 -12510754 - AluSx SINE Alu -4 308 1 545 296 27 18 chr5 190574840 190575060 -12510472 + L1MC4a LINE L1 5677 5898 -1910 7827 55 9 0 chr5 190576327 190577284 -12508248 - LTR5 LTR ERVK -3 966 1 283 314 17 17 chr5 190577312 190577430 -12508102 + MIR SINE MIR 59 176 -86 343 304 51 65 chr5 190577486 190577703 -12507829 + L2 LINE L2 3011 3224 -89 207 196 59 0 chr5 190577729 190577780 -12507752 - L2 LINE L2 -210 3062 3009 341 391 4 38 chr5 190577926 190578164 -12507368 - MIR SINE MIR -5 257 28 900 216 27 5 chr5 190578686 190578871 -12506661 + MIR SINE MIR 73 261 -1 397 317 67 22 chr5 190579758 190579938 -12505594 - MIR SINE MIR -74 188 1 782 288 9 5 chr5 190580890 190581102 -12504430 + MIR SINE MIR 2 214 -48 254 343 43 21 chr5 190581113 190581253 -12504279 - L2 LINE L2 -4 3309 3167 396 256 67 16 chr5 190581381 190581506 -12504026 - MIR SINE MIR -62 146 59 795 241 57 124 chr5 190581507 190581866 -12503666 + L1MC4a LINE L1 5565 5897 -235 340 333 23 8 chr5 190582100 190582229 -12503303 + MIR3 SINE MIR 77 207 -1 272 303 76 50 chr5 190582435 190582554 -12502978 - L2 LINE L2 -12 3301 3180 635 304 49 36 chr5 190582602 190582849 -12502683 - MIR SINE MIR -12 250 1 190 351 26 0 chr5 190582950 190583027 -12502505 - L2 LINE L2 -199 3073 2995 893 130 21 73 chr5 190583514 190583706 -12501826 + L1MB7 LINE L1 5650 5831 -353 * 2129 52 3 0 chr5 190583664 190583945 -12501587 - L1ME LINE L1 -549 5617 5333 5326 10 0 0 chr5 190583945 190584530 -12501002 + L1PA2 LINE L1 5569 6155 0 886 164 7 0 chr5 190584530 190584682 -12500850 + L1MB7 LINE L1 5821 5973 -211 351 271 90 49 chr5 190584770 190584914 -12500618 - L2 LINE L2 -12 3260 3111 191 233 23 0 chr5 190584937 190584980 -12500552 - L2 LINE L2 -18 3254 3211 829 156 72 0 chr5 190585024 190585204 -12500328 + L1MB7 LINE L1 5992 6184 0 370 269 47 74 chr5 190585698 190585764 -12499768 - L2 LINE L2 -540 2774 2708 1643 95 0 0 chr5 190585764 190585985 -12499547 - AluSg/x SINE Alu -14 296 76 370 269 47 74 chr5 190585985 190586067 -12499465 - L2 LINE L2 -606 2708 2630 393 238 41 25 chr5 190586140 190586262 -12499270 + L2 LINE L2 3186 3309 -4 385 241 145 48 chr5 190586280 190586487 -12499045 + MIR SINE MIR 10 236 -26 197 356 104 22 chr5 190586882 190587017 -12498515 - MIR SINE MIR 0 262 117 909 184 48 0 chr5 190587251 190587419 -12498113 - MER5A DNA MER1_type -12 177 2 300 27 0 0 chr5 190587640 190587677 -12497855 + (CAA)n Simple_repeat Simple_repeat 3 39 0 323 229 114 38 chr5 190588773 190588878 -12496654 - MIR SINE MIR -73 189 77 655 97 42 15 chr5 190589615 190589724 -12495808 - MER20 DNA MER1_type -94 125 16 * 696 301 17 92 chr5 190589721 190590133 -12495399 - Charlie8 DNA MER1_type -1978 439 59 317 167 91 15 chr5 190590461 190590527 -12495005 - MIR3 SINE MIR -6 202 132 406 263 108 7 chr5 190590705 190590854 -12494678 - MIR3 SINE MIR -25 183 12 230 241 185 46 chr5 190590911 190591019 -12494513 - LTR67 LTR ERVL -3 554 432 292 250 70 20 chr5 190591260 190591360 -12494172 + MLT1J LTR MaLR 235 339 -172 382 270 13 86 chr5 190591459 190591611 -12493921 - MIR3 SINE MIR -45 163 23 206 116 23 0 chr5 190591876 190591919 -12493613 + (CAT)n Simple_repeat Simple_repeat 1 44 0 2219 168 53 65 chr5 190592757 190593250 -12492282 + MLT1D LTR MaLR 19 505 0 233 286 13 39 chr5 190593258 190593335 -12492197 - L2 LINE L2 -35 3278 3204 432 56 15 18 chr5 190593700 190593762 -12491770 + MLT1D LTR MaLR 1 72 -433 * 725 199 154 25 chr5 190593760 190594056 -12491476 - MER33 DNA MER1_type -5 358 1 656 296 68 0 chr5 190594632 190594838 -12490694 - MIR SINE MIR -7 255 36 210 37 0 0 chr5 190595013 190595040 -12490492 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 799 165 0 12 chr5 190595232 190595396 -12490136 + CT-rich Low_complexity Low_complexity 2 163 0 864 260 8 50 chr5 190597032 190597274 -12488258 - MIR SINE MIR -29 233 2 245 323 86 112 chr5 190597422 190597887 -12487645 - L2 LINE L2 0 3272 2820 333 243 0 14 chr5 190598232 190598306 -12487226 + MIR SINE MIR 190 262 0 198 71 0 0 chr5 190599897 190599925 -12485607 + (ATG)n Simple_repeat Simple_repeat 3 30 0 542 316 8 60 chr5 190599931 190600165 -12485367 - MIR SINE MIR -18 244 23 406 280 147 0 chr5 190600290 190600433 -12485099 - MER103 DNA DNA -1 165 2 353 327 60 27 chr5 190602168 190602318 -12483214 + L2 LINE L2 3118 3272 0 275 238 16 0 chr5 190602694 190602757 -12482775 + L2 LINE L2 3250 3313 0 224 280 0 0 chr5 190602857 190602907 -12482625 - L2 LINE L2 -3 3269 3220 415 270 30 0 chr5 190602907 190603007 -12482525 + MIR SINE MIR 45 147 -115 304 80 0 40 chr5 190603808 190603858 -12481674 - Alu SINE Alu 0 300 253 353 216 40 0 chr5 190603867 190603941 -12481591 + MIR SINE MIR 116 192 -70 641 299 56 21 chr5 190603989 190604223 -12481309 - MIR SINE MIR -8 254 13 380 312 55 50 chr5 190604571 190604679 -12480853 - MIR SINE MIR -21 241 130 1305 188 0 0 chr5 190604679 190604902 -12480630 + MER58A DNA MER1_type 2 224 0 380 312 55 50 chr5 190604902 190604992 -12480540 - MIR SINE MIR -132 130 42 749 67 0 9 chr5 190605209 190605314 -12480218 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 261 351 152 0 chr5 190605336 190605501 -12480031 + L2 LINE L2 2866 3055 -217 709 270 142 0 chr5 190605654 190605880 -12479652 - L2 LINE L2 -1736 1578 1321 383 314 79 63 chr5 190606169 190606484 -12479048 - L2 LINE L2 -5 3308 2989 1385 47 0 0 chr5 190606567 190606737 -12478795 - AluYb8 SINE Alu -13 305 136 486 241 91 37 chr5 190606737 190606924 -12478608 - MIR SINE MIR -53 209 13 688 268 63 5 chr5 190606980 190607170 -12478362 + MIR SINE MIR 30 230 -32 855 214 99 12 chr5 190607179 190607422 -12478110 - MER33 DNA MER1_type 0 324 61 215 108 15 92 chr5 190608060 190608125 -12477407 + (TTTTTG)n Simple_repeat Simple_repeat 2 61 0 285 243 313 14 chr5 190608261 190608405 -12477127 - MIR SINE MIR -56 206 20 990 278 129 59 chr5 190608542 190609032 -12476500 + L2 LINE L2 1563 2086 -1228 213 274 170 9 chr5 190609616 190609722 -12475810 - L2 LINE L2 -225 3047 2925 188 283 133 0 chr5 190610099 190610159 -12475373 + L3 LINE CR1 1380 1447 -130 346 287 32 0 chr5 190611091 190611185 -12474347 + MLT1K LTR MaLR 175 271 -317 1315 157 85 112 chr5 190611208 190611606 -12473926 + MLT1A2 LTR MaLR 1 374 0 306 253 120 40 chr5 190611680 190611830 -12473702 + MLT1K LTR MaLR 411 572 -16 2128 127 0 0 chr5 190611831 190612138 -12473394 - AluSx SINE Alu -5 307 1 732 301 73 29 chr5 190612157 190612403 -12473129 + MIR SINE MIR 2 258 -4 1847 138 21 0 chr5 190612692 190612816 -12472716 + AluSx SINE Alu 1 121 -191 210 37 0 0 chr5 190612816 190612843 -12472689 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1847 138 21 0 chr5 190612843 190613007 -12472525 + AluSx SINE Alu 121 295 -17 302 278 73 33 chr5 190613035 190613186 -12472346 + MER103 DNA DNA 3 159 -7 5448 70 40 49 chr5 190615622 190616495 -12469037 + SVA Other Other 2 866 -520 6553 61 7 39 chr5 190616514 190617798 -12467734 + SVA Other Other 432 1416 0 296 264 148 58 chr5 190618014 190618291 -12467241 + L2 LINE L2 2967 3268 -4 970 171 6 0 chr5 190618706 190618870 -12466662 + FRAM SINE Alu 1 164 -12 220 308 0 0 chr5 190618878 190618930 -12466602 + polypurine Low_complexity Low_complexity 2 53 0 247 250 0 0 chr5 190618973 190619074 -12466458 + (TGGA)n Simple_repeat Simple_repeat 1 101 0 504 193 193 90 chr5 190619106 190619318 -12466214 + L2 LINE L2 3080 3313 0 181 98 49 0 chr5 190619626 190619667 -12465865 + (TATG)n Simple_repeat Simple_repeat 1 43 0 520 249 91 45 chr5 190619910 190620131 -12465401 + MIR SINE MIR 20 250 -12 587 282 111 9 chr5 190620240 190620456 -12465076 + MIR SINE MIR 1 238 -24 728 308 100 25 chr5 190620480 190620879 -12464653 + L2 LINE L2 2865 3293 -20 297 109 0 0 chr5 190620885 190620931 -12464601 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 568 304 20 30 chr5 190621845 190622046 -12463486 + MIR SINE MIR 62 260 -2 272 279 81 23 chr5 190622215 190622301 -12463231 - MIR SINE MIR -111 151 61 387 271 157 7 chr5 190622791 190622931 -12462601 - MIR SINE MIR -46 216 56 410 267 107 13 chr5 190623297 190623456 -12462076 + MIR SINE MIR 88 260 -2 237 311 106 62 chr5 190623461 190623622 -12461910 - MIR3 SINE MIR -22 186 19 988 197 11 0 chr5 190623636 190623819 -12461713 - MER5A DNA MER1_type -4 185 1 442 253 159 55 chr5 190623830 190624119 -12461413 - MER102a DNA MER1_type -8 322 4 256 271 150 30 chr5 190624482 190624615 -12460917 - MIR SINE MIR -3 259 111 418 292 130 29 chr5 190625721 190626029 -12459503 + L2 LINE L2 2632 2970 -344 1212 142 55 0 chr5 190626070 190626288 -12459244 + AluSp SINE Alu 84 313 0 243 294 29 0 chr5 190626419 190626487 -12459045 + L2 LINE L2 3134 3203 -69 710 194 138 56 chr5 190626509 190626606 -12458926 - MER20 DNA MER1_type 0 219 131 3770 112 31 0 chr5 190626606 190627115 -12458417 + MER1A DNA MER1_type 3 527 0 710 194 138 56 chr5 190627115 190627213 -12458319 - MER20 DNA MER1_type -88 131 8 361 350 75 0 chr5 190627494 190627680 -12457852 + MIR SINE MIR 63 262 0 6293 137 98 3 chr5 190627776 190628280 -12457252 + Tigger3b DNA MER2_type 14 469 -2559 2357 80 0 3 chr5 190628280 190628591 -12456941 + AluY SINE Alu 1 310 -1 6293 137 98 3 chr5 190628591 190629198 -12456334 + Tigger3b DNA MER2_type 469 1231 0 195 129 0 0 chr5 190629244 190629275 -12456257 + (A)n Simple_repeat Simple_repeat 1 31 0 267 330 148 0 chr5 190629313 190629428 -12456104 + L2 LINE L2 3141 3272 0 513 232 22 14 chr5 190629817 190629955 -12455577 + MIR SINE MIR 124 262 0 180 280 0 20 chr5 190629958 190630008 -12455524 - L2 LINE L2 -1 3271 3223 * 487 293 91 16 chr5 190629978 190630192 -12455340 - MIR SINE MIR -14 248 22 811 208 15 55 chr5 190630193 190630395 -12455137 - MER58A DNA MER1_type -1 223 30 216 0 0 0 chr5 190630887 190630911 -12454621 + (A)n Simple_repeat Simple_repeat 1 24 0 324 177 112 13 chr5 190631018 190631117 -12454415 + MIR SINE MIR 44 143 -65 581 311 24 9 chr5 190632729 190632941 -12452591 - MIR SINE MIR -1 261 47 496 215 161 13 chr5 190634078 190634227 -12451305 + MER5B DNA MER1_type 8 178 0 734 250 76 18 chr5 190635347 190635571 -12449961 + L2 LINE L2 3077 3313 0 409 333 75 5 chr5 190635774 190635960 -12449572 - MIR SINE MIR -29 233 35 1695 96 4 8 chr5 190637214 190637454 -12448078 + AluSc SINE Alu 1 239 -70 694 279 137 8 chr5 190637645 190637907 -12447625 - MLT1K LTR MaLR -1 587 292 371 380 43 30 chr5 190638177 190638548 -12446984 + L2 LINE L2 2897 3272 0 245 300 8 54 chr5 190639124 190639254 -12446278 - MIR SINE MIR -115 147 24 2965 151 107 118 chr5 190639316 190640156 -12445376 - L1MB8 LINE L1 -2 6176 5346 537 274 166 0 chr5 190640161 190640336 -12445196 + MIR SINE MIR 49 252 -10 351 215 13 0 chr5 190641131 190641210 -12444322 + MIR SINE MIR 104 183 -79 1045 161 32 16 chr5 190641237 190641423 -12444109 - MER46A DNA MER2_type 0 236 48 229 254 82 49 chr5 190641431 190641553 -12443979 - L3 LINE CR1 -273 1304 1179 351 335 151 7 chr5 190641630 190641782 -12443750 - MER91A DNA MER1_type -20 176 3 237 244 58 12 chr5 190642272 190642358 -12443174 + MIR SINE MIR 173 262 0 478 233 0 0 chr5 190642601 190642704 -12442828 + MER5A DNA MER1_type 7 109 -80 2468 56 0 0 chr5 190642768 190643072 -12442460 - AluY SINE Alu -7 304 1 671 209 52 41 chr5 190643073 190643245 -12442287 - MER5B DNA MER1_type 0 178 5 463 307 80 6 chr5 190643887 190644063 -12441469 + MIR SINE MIR 72 260 -2 217 350 43 17 chr5 190644080 190644197 -12441335 + L2 LINE L2 3137 3256 -16 44 56 0 0 chr5 190644199 190644271 -12441261 + AT_rich Low_complexity Low_complexity 1 72 0 494 259 218 20 chr5 190644452 190644649 -12440883 + MIR SINE MIR 21 256 -6 732 277 72 52 chr5 190644666 190645113 -12440419 - L1ME4a LINE L1 -218 5903 5448 300 289 78 35 chr5 190645528 190645670 -12439862 + MIR SINE MIR 13 160 -102 447 289 72 18 chr5 190645703 190645869 -12439663 + MIR SINE MIR 1 175 -87 235 361 19 0 chr5 190646578 190646686 -12438846 + MIR3 SINE MIR 15 124 -84 247 384 14 7 chr5 190647470 190647608 -12437924 + L2 LINE L2 2720 2858 -456 37 76 0 0 chr5 190647969 190648048 -12437484 + AT_rich Low_complexity Low_complexity 1 79 0 353 189 63 36 chr5 190648234 190648345 -12437187 - L1ME4a LINE L1 -295 5826 5713 2286 88 3 0 chr5 190648360 190648665 -12436867 - AluSq SINE Alu -7 306 1 357 286 112 28 chr5 190648958 190649116 -12436416 + MIR SINE MIR 25 205 -57 787 265 15 5 chr5 190649277 190649481 -12436051 + Charlie8 DNA MER1_type 38 243 -2174 281 279 115 55 chr5 190650287 190650470 -12435062 + L2 LINE L2 3120 3313 0 390 192 26 0 chr5 190651121 190651199 -12434333 - MIR SINE MIR -90 172 93 338 373 21 0 chr5 190651693 190651835 -12433697 + MIR SINE MIR 102 246 -16 973 266 172 33 chr5 190653133 190653877 -12431655 + L2 LINE L2 2476 3296 -17 377 336 108 22 chr5 190654105 190654328 -12431204 + MIR SINE MIR 14 255 -7 192 377 14 0 chr5 190654804 190654873 -12430659 - L2 LINE L2 -82 3190 3121 191 347 0 42 chr5 190655206 190655301 -12430231 + L2 LINE L2 3161 3251 -21 212 302 47 19 chr5 190655309 190655415 -12430117 - MIR3 SINE MIR -85 123 15 21 57 0 0 chr5 190656026 190656061 -12429471 + AT_rich Low_complexity Low_complexity 1 35 0 314 279 93 36 chr5 190656131 190656271 -12429261 + MIR3 SINE MIR 2 149 -59 295 306 42 14 chr5 190656347 190656491 -12429041 + MIR SINE MIR 20 167 -95 321 296 106 48 chr5 190657078 190657267 -12428265 - MIR SINE MIR 0 262 63 189 238 0 24 chr5 190657607 190657649 -12427883 - MIR3 SINE MIR -33 175 135 2221 95 7 0 chr5 190658338 190658634 -12426898 + AluSc SINE Alu 3 300 -9 189 0 0 0 chr5 190659106 190659127 -12426405 + (TC)n Simple_repeat Simple_repeat 2 22 0 1814 317 68 30 chr5 190659428 190659839 -12425693 - HERVL LTR ERVL -327 5345 4951 2621 161 30 15 chr5 190659839 190660299 -12425233 + MLT1C LTR MaLR 1 467 0 1814 317 68 30 chr5 190660299 190661366 -12424166 - HERVL LTR ERVL -721 4951 3794 2125 335 66 31 chr5 190661437 190662072 -12423460 - HERVL LTR ERVL -2121 3643 3031 2089 133 0 3 chr5 190662072 190662373 -12423159 + AluSx SINE Alu 1 300 -12 2125 335 66 31 chr5 190662373 190663010 -12422522 - HERVL LTR ERVL -2733 3031 2327 743 332 30 20 chr5 190663117 190663418 -12422114 - HERVL LTR ERVL -2940 2056 1753 1822 187 41 56 chr5 190663785 190664280 -12421252 - MLT1C LTR MaLR -2 503 1 293 345 78 45 chr5 190664315 190664672 -12420860 - HERVL LTR ERVL -3743 1253 885 1549 208 54 54 chr5 190665145 190665592 -12419940 + MLT1D LTR MaLR 1 447 -58 276 30 0 0 chr5 190666038 190666071 -12419461 + (CA)n Simple_repeat Simple_repeat 2 34 0 420 229 66 83 chr5 190666160 190666341 -12419191 - HsTC2 DNA Tc2 0 1898 3 328 173 0 74 chr5 190667112 190667193 -12418339 + L3 LINE CR1 1415 1489 -88 2271 184 40 42 chr5 190667217 190667392 -12418140 - Charlie1b DNA MER1_type -2238 523 349 1901 137 3 26 chr5 190667392 190667705 -12417827 + AluJb SINE Alu 3 308 -4 2271 184 40 42 chr5 190667705 190668052 -12417480 - Charlie1b DNA MER1_type -2412 349 2 444 270 104 25 chr5 190668324 190668422 -12417110 - MER5B DNA MER1_type -2 176 58 2035 78 0 4 chr5 190668422 190668693 -12416839 - AluSc SINE Alu -39 270 1 444 270 104 25 chr5 190668693 190668757 -12416775 - MER5B DNA MER1_type -120 58 1 1278 162 19 5 chr5 190668844 190669060 -12416472 - MER20 DNA MER1_type 0 219 1 293 222 34 103 chr5 190669942 190670059 -12415473 + L2 LINE L2 3191 3299 -14 399 345 85 50 chr5 190670131 190670508 -12415024 - L2 LINE L2 0 3272 2883 722 326 31 34 chr5 190670516 190671056 -12414476 + L2 LINE L2 2764 3307 -6 253 250 13 13 chr5 190671063 190671139 -12414393 + GA-rich Low_complexity Low_complexity 4 79 0 501 287 30 24 chr5 190671799 190671966 -12413566 - MIR SINE MIR -74 188 21 699 267 91 5 chr5 190672008 190672195 -12413337 - MIR SINE MIR -14 248 46 1312 217 107 3 chr5 190672551 190672860 -12412672 - MER58B DNA MER1_type 0 341 1 334 316 90 0 chr5 190673776 190673909 -12411623 - MER117 DNA MER1_type -44 153 9 366 269 221 7 chr5 190673920 190674069 -12411463 - MER5A DNA MER1_type 0 189 9 323 327 47 0 chr5 190674078 190674185 -12411347 + MIR SINE MIR 10 121 -141 207 248 13 144 chr5 190675372 190675525 -12410007 - MER91A DNA MER1_type -57 139 7 224 321 0 0 chr5 190677335 190677391 -12408141 - MIR SINE MIR -65 143 88 183 80 0 0 chr5 190677555 190677580 -12407952 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 775 247 240 10 chr5 190677584 190678063 -12407469 - L2 LINE L2 -15 3298 2699 555 215 25 25 chr5 190678247 190678368 -12407164 - MIR SINE MIR -56 206 86 354 271 37 9 chr5 190678546 190678653 -12406879 - MIR SINE MIR -36 226 117 446 310 0 8 chr5 190678901 190679030 -12406502 + L2 LINE L2 3186 3313 0 287 289 106 42 chr5 190679476 190679618 -12405914 + MIR3 SINE MIR 21 171 -37 211 271 0 34 chr5 190679591 190679650 -12405882 - MIR3 SINE MIR 0 208 152 * 268 300 111 0 chr5 190679843 190679933 -12405599 - MIR3 SINE MIR -49 159 60 2394 100 0 0 chr5 190680036 190680335 -12405197 + AluSg SINE Alu 5 303 -7 199 239 239 0 chr5 190680446 190680513 -12405019 - MIR SINE MIR -67 195 113 378 185 0 0 chr5 190681331 190681412 -12404120 + (TG)n Simple_repeat Simple_repeat 1 81 0 231 61 0 0 chr5 190681411 190681444 -12404088 + (GA)n Simple_repeat Simple_repeat 1 33 0 * 292 353 60 31 chr5 190681570 190681887 -12403645 + L1M3d LINE L1 8 333 -5558 9527 249 28 7 chr5 190681930 190684022 -12401510 + L1M3de LINE L1 835 2970 -4516 1505 266 61 21 chr5 190684046 190684752 -12400780 + L1M3de LINE L1 2908 3641 -3924 994 149 11 43 chr5 190684756 190684944 -12400588 - THE1B LTR MaLR 0 364 183 183 156 0 0 chr5 190685058 190685090 -12400442 + CT-rich Low_complexity Low_complexity 1 32 0 2031 73 4 8 chr5 190685485 190685744 -12399788 - AluY SINE Alu -13 298 41 1786 226 26 30 chr5 190685744 190686209 -12399323 + L1M3de LINE L1 3721 4183 -3382 1221 185 37 5 chr5 190686237 190686453 -12399079 + MER58A DNA MER1_type 1 223 -1 842 219 11 6 chr5 190688271 190688449 -12397083 - MER5A DNA MER1_type -5 184 6 289 257 9 38 chr5 190689338 190689443 -12396089 + CT-rich Low_complexity Low_complexity 2 103 0 248 299 140 9 chr5 190690755 190690862 -12394670 - L2 LINE L2 -1 3312 3192 303 256 101 16 chr5 190691103 190691232 -12394300 - L1ME3A LINE L1 0 6170 6031 1099 266 20 42 chr5 190691340 190691743 -12393789 - L1ME3A LINE L1 -208 5962 5569 * 2212 218 88 28 chr5 190691737 190693075 -12392457 - L1ME3 LINE L1 -195 5967 4556 820 264 60 8 chr5 190693305 190693707 -12391825 - L1ME3 LINE L1 -2789 3357 2933 313 266 62 47 chr5 190693707 190693835 -12391697 - HAL1 LINE L1 -1471 1036 907 457 254 37 32 chr5 190693835 190694024 -12391508 - HAL1 LINE L1 -1554 953 764 723 308 58 23 chr5 190694084 190694477 -12391055 - HAL1 LINE L1 -1832 675 269 600 310 57 16 chr5 190695900 190696145 -12389387 - MIR SINE MIR 0 262 8 435 245 20 20 chr5 190696216 190696318 -12389214 - MIR3 SINE MIR -11 197 96 1193 282 80 72 chr5 190696415 190697099 -12388433 - MER21B LTR ERV1 -150 713 24 190 267 93 56 chr5 190697543 190697704 -12387828 - MIR SINE MIR -81 181 15 220 196 43 0 chr5 190697973 190698019 -12387513 + MER91B DNA MER1_type 15 62 -128 432 301 87 36 chr5 190698063 190698282 -12387250 - MIR SINE MIR -21 241 12 233 279 8 74 chr5 190698835 190698957 -12386575 - MIR SINE MIR -124 138 25 383 232 20 50 chr5 190699470 190699569 -12385963 + MER91C DNA MER1_type 40 135 -5 281 196 49 59 chr5 190700445 190700547 -12384985 - L2 LINE L2 -32 3240 3140 510 319 33 0 chr5 190700572 190700782 -12384750 - MIR SINE MIR -33 229 13 215 260 240 26 chr5 190702022 190702176 -12383356 - MIR SINE MIR -3 259 73 22 35 0 0 chr5 190702798 190702827 -12382705 + AT_rich Low_complexity Low_complexity 1 29 0 705 309 74 0 chr5 190703677 190703920 -12381612 - MIR SINE MIR -1 261 1 279 304 54 27 chr5 190704372 190704484 -12381048 - HERV16 LTR ERVL -4860 136 22 470 297 166 0 chr5 190704538 190704683 -12380849 + MER5A DNA MER1_type 9 177 -12 2265 111 10 0 chr5 190704692 190704990 -12380542 + AluSc SINE Alu 1 301 -8 2018 107 10 41 chr5 190705006 190705296 -12380236 + AluSq SINE Alu 21 301 -12 268 268 49 0 chr5 190706173 190706255 -12379277 + MIR SINE MIR 84 170 -38 267 287 115 35 chr5 190706726 190706813 -12378719 - L2 LINE L2 -13 3259 3166 197 288 88 71 chr5 190708336 190708676 -12376856 - L2 LINE L2 -86 3186 2841 620 267 31 20 chr5 190708742 190708937 -12376595 - MIR SINE MIR -9 253 57 241 235 80 63 chr5 190709059 190709171 -12376361 + MER5A DNA MER1_type 65 177 -1 * 260 315 14 0 chr5 190709171 190709219 -12376313 - MIR3 SINE MIR -51 157 109 198 167 0 0 chr5 190709313 190709349 -12376183 + G-rich Low_complexity Low_complexity 3 38 0 672 263 42 46 chr5 190709369 190709458 -12376074 - MER113 DNA MER1_type? -6 515 427 1723 204 92 42 chr5 190709458 190709938 -12375594 - MLT1D LTR MaLR 0 505 2 672 263 42 46 chr5 190709938 190710107 -12375425 - MER113 DNA MER1_type? -94 427 258 607 262 7 7 chr5 190710115 190710260 -12375272 + MIR SINE MIR 118 262 0 192 339 61 26 chr5 190710420 190710535 -12374997 + L2 LINE L2 3153 3271 -1 280 98 66 49 chr5 190711181 190711242 -12374290 - MIR SINE MIR -98 164 103 513 327 13 3 chr5 190712290 190712494 -12373038 - MIR SINE MIR -49 159 3 24 32 0 0 chr5 190712639 190712670 -12372862 + AT_rich Low_complexity Low_complexity 1 31 0 361 316 14 75 chr5 190713404 190713682 -12371850 - MIR SINE MIR -1 261 1 806 287 109 12 chr5 190713751 190714165 -12371367 - L1ME4a LINE L1 -50 6071 5618 561 222 0 0 chr5 190715212 190715347 -12370185 + (TG)n Simple_repeat Simple_repeat 2 136 0 332 363 0 7 chr5 190715566 190715712 -12369820 + GA-rich Low_complexity Low_complexity 1 145 0 375 105 0 0 chr5 190715727 190715784 -12369748 + (GA)n Simple_repeat Simple_repeat 2 58 0 381 312 35 0 chr5 190715846 190716016 -12369516 + GA-rich Low_complexity Low_complexity 4 179 0 448 288 91 27 chr5 190717046 190717271 -12368261 + MIR SINE MIR 3 245 -17 254 294 153 8 chr5 190717456 190717622 -12367910 - MIR SINE MIR -63 145 12 213 250 315 0 chr5 190717965 190718057 -12367475 - MIR SINE MIR -118 144 24 573 257 81 21 chr5 190719229 190719428 -12366104 - MIR SINE MIR -21 241 33 366 275 64 0 chr5 190720425 190720534 -12364998 - MIR SINE MIR -71 191 76 489 62 0 0 chr5 190720949 190721014 -12364518 + (ATG)n Simple_repeat Simple_repeat 1 65 0 346 296 163 0 chr5 190721019 190721154 -12364378 - MIR SINE MIR -10 252 96 190 324 63 18 chr5 190721439 190721550 -12363982 - MIR SINE MIR -60 148 33 220 191 0 21 chr5 190722070 190722117 -12363415 + GA-rich Low_complexity Low_complexity 2 47 0 2207 134 0 3 chr5 190722871 190723177 -12362355 + AluJb SINE Alu 1 305 -7 331 280 77 30 chr5 190723360 190723528 -12362004 - MIR SINE MIR -3 259 84 488 346 59 21 chr5 190724128 190724167 -12361365 - MIR SINE MIR -10 252 216 2188 107 37 0 chr5 190724167 190724466 -12361066 - AluSx SINE Alu -2 310 1 488 346 59 21 chr5 190724466 190724663 -12360869 - MIR SINE MIR -46 216 7 255 294 170 37 chr5 190724789 190725007 -12360525 + L2 LINE L2 2591 2837 -477 2591 93 34 6 chr5 190725117 190725471 -12360061 - THE1B LTR MaLR 0 364 1 553 249 68 34 chr5 190725649 190725826 -12359706 + L1ME3A LINE L1 5966 6148 -22 1995 201 43 9 chr5 190725829 190726251 -12359281 + MER63B DNA MER1_type 1 436 0 319 290 133 42 chr5 190726333 190726619 -12358913 + L2 LINE L2 2923 3234 -38 723 92 0 0 chr5 190726640 190726749 -12358783 + (TGGA)n Simple_repeat Simple_repeat 1 109 0 742 167 97 0 chr5 190727177 190727321 -12358211 + MER63 DNA MER1_type 904 1061 0 375 316 37 16 chr5 190727365 190727555 -12357977 + MIR SINE MIR 19 212 -50 282 29 0 0 chr5 190727987 190728022 -12357510 + (CA)n Simple_repeat Simple_repeat 1 35 0 212 368 32 0 chr5 190728426 190728521 -12357011 - MIR SINE MIR -80 182 85 1074 259 32 43 chr5 190728864 190729239 -12356293 + L1ME2 LINE L1 5785 6155 -9 191 294 0 20 chr5 190729255 190729306 -12356226 - L2 LINE L2 -86 3186 3137 1203 133 4 5 chr5 190730581 190730789 -12354743 + L1P5 LINE L1 5486 5698 -453 857 219 38 148 chr5 190730980 190731609 -12353923 + L1MD2 LINE L1 5788 6347 -12 2050 135 0 26 chr5 190731850 190732161 -12353371 + AluSx SINE Alu 1 303 -9 6848 91 20 12 chr5 190732165 190733166 -12352366 - L1P3 LINE L1 -832 5314 4306 819 92 0 42 chr5 190733168 190733310 -12352222 + L1P3 LINE L1 5342 5477 -677 435 189 107 50 chr5 190733651 190733810 -12351722 + L2 LINE L2 1803 1970 -1344 211 304 0 0 chr5 190733929 190733998 -12351534 + (CA)n Simple_repeat Simple_repeat 2 70 0 694 237 82 19 chr5 190734006 190734213 -12351319 + L2 LINE L2 3094 3313 0 351 0 0 0 chr5 190734564 190734603 -12350929 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 225 196 0 0 chr5 190736886 190736932 -12348600 + (CA)n Simple_repeat Simple_repeat 1 46 0 184 292 93 50 chr5 190738178 190738410 -12347122 + MIR3 SINE MIR 2 249 -13 31 88 0 0 chr5 190738783 190738863 -12346669 + AT_rich Low_complexity Low_complexity 1 80 0 1840 112 0 90 chr5 190739319 190739641 -12345891 + AluSx SINE Alu 1 293 -19 457 218 296 0 chr5 190739892 190740034 -12345498 + MER5A DNA MER1_type 6 189 0 1625 221 137 17 chr5 190740123 190740716 -12344816 - MER39 LTR ERV1 0 707 6 1663 183 0 0 chr5 190740745 190741019 -12344513 + AluJo SINE Alu 24 297 -15 2416 167 14 27 chr5 190741215 190741653 -12343879 + MSTB1 LTR MaLR 1 432 0 2256 209 83 6 chr5 190742010 190742516 -12343016 + MER90 LTR ERV1 70 614 0 341 310 147 41 chr5 190742531 190742850 -12342682 - L2 LINE L2 -4 3268 2916 295 310 103 61 chr5 190743117 190743846 -12341686 + L1MC4a LINE L1 5123 5394 -752 2291 107 0 0 chr5 190743988 190744288 -12341244 - AluSg SINE Alu -4 306 7 222 276 0 17 chr5 190744339 190744397 -12341135 + MIR SINE MIR 20 76 -132 847 250 11 0 chr5 190744714 190744898 -12340634 - MLT1B LTR MaLR 0 390 205 189 0 0 0 chr5 190744900 190744921 -12340611 + (GA)n Simple_repeat Simple_repeat 1 21 0 1479 192 105 13 chr5 190745258 190745571 -12339961 + MER61A LTR ERV1 1 342 -1 1074 144 0 0 chr5 190745774 190745954 -12339578 + (TA)n Simple_repeat Simple_repeat 1 180 0 2326 81 3 7 chr5 190745954 190746249 -12339283 - AluSg SINE Alu -16 294 1 2188 114 0 0 chr5 190746249 190746538 -12338994 - AluSx SINE Alu -23 289 1 1041 245 72 46 chr5 190746679 190747112 -12338420 - L1ME3A LINE L1 -26 6144 5701 3514 193 8 9 chr5 190747796 190748450 -12337082 - MER82 DNA MER2_type 0 653 1 423 272 38 43 chr5 190749415 190749599 -12335933 + LTR33 LTR ERVL 329 511 -10 1344 174 100 9 chr5 190749728 190750078 -12335454 - Charlie1a DNA MER1_type 0 1455 1074 21 0 0 0 chr5 190750119 190750140 -12335392 + AT_rich Low_complexity Low_complexity 1 21 0 2423 186 105 78 chr5 190750140 190750856 -12334676 - Charlie1a DNA MER1_type -720 735 1 189 121 0 30 chr5 190751148 190751181 -12334351 + MIR SINE MIR 112 143 -65 490 252 0 15 chr5 190751301 190751432 -12334100 - L1MA4 LINE L1 -35 6265 6137 359 255 29 10 chr5 190751618 190751720 -12333812 + MIR SINE MIR 47 150 -112 1972 129 0 21 chr5 190751751 190752074 -12333458 + AluSx SINE Alu 1 317 0 1388 123 5 0 chr5 190752086 190752319 -12333213 + AluSc SINE Alu 93 326 0 1711 164 37 51 chr5 190752590 190752944 -12332588 - MER31B LTR ERV1 -117 349 1 363 179 15 0 chr5 190753082 190753149 -12332383 - MER31B LTR ERV1 -398 68 1 2242 233 17 43 chr5 190753246 190753376 -12332156 + L1M4 LINE L1 4487 4619 -1527 2158 116 3 10 chr5 190753376 190753669 -12331863 + AluSq SINE Alu 1 291 -22 2242 233 17 43 chr5 190753669 190754183 -12331349 + L1M4 LINE L1 4619 5114 -1032 487 209 117 87 chr5 190754186 190754382 -12331150 - Charlie8 DNA MER1_type -2171 246 45 317 305 43 7 chr5 190754958 190755099 -12330433 + MIR SINE MIR 51 196 -66 2116 144 0 3 chr5 190756106 190756412 -12329120 + AluSc SINE Alu 3 307 -2 219 294 91 56 chr5 190758268 190758489 -12327043 - MIR SINE MIR -20 242 30 506 204 0 0 chr5 190758686 190758774 -12326758 - MER20 DNA MER1_type -3 216 129 1630 196 23 17 chr5 190758809 190759162 -12326370 - MLT1A1 LTR MaLR -10 355 1 821 129 7 64 chr5 190759162 190759301 -12326231 - MER20 DNA MER1_type -88 131 1 616 217 87 6 chr5 190760006 190760167 -12325365 - MIR SINE MIR -71 191 18 1977 96 0 0 chr5 190760200 190760450 -12325082 + AluSx SINE Alu 47 296 -16 2331 27 0 0 chr5 190760450 190760516 -12325016 - L1PA5 LINE L1 -163 5991 5926 524 307 35 4 chr5 190760516 190760744 -12324788 - L1MB7 LINE L1 -259 5925 5691 994 147 0 15 chr5 190760785 190761051 -12324481 + (TA)n Simple_repeat Simple_repeat 1 262 0 235 247 118 32 chr5 190761361 190761454 -12324078 + MIR SINE MIR 75 175 -87 240 306 0 0 chr5 190761572 190761644 -12323888 + MIR SINE MIR 81 152 -110 211 302 58 36 chr5 190762018 190762157 -12323375 - MIR SINE MIR -67 195 54 * 489 284 37 21 chr5 190762141 190762331 -12323201 + MIR SINE MIR 40 232 -30 204 97 0 0 chr5 190762341 190762372 -12323160 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 267 277 71 36 chr5 190762754 190762866 -12322666 + L2 LINE L2 3157 3272 0 379 326 32 16 chr5 190763535 190763725 -12321807 + MIR SINE MIR 13 205 -57 290 250 270 0 chr5 190763795 190763895 -12321637 + L2 LINE L2 3137 3263 -9 219 231 90 0 chr5 190763964 190764042 -12321490 + L2 LINE L2 3138 3222 -50 254 315 21 21 chr5 190764044 190764187 -12321345 + MIR SINE MIR 103 245 -17 331 230 14 0 chr5 190764379 190764453 -12321079 - MIR SINE MIR -157 105 31 826 214 20 15 chr5 190764498 190764694 -12320838 - MER20 DNA MER1_type -4 215 19 205 275 99 11 chr5 190764781 190764872 -12320660 + MIR SINE MIR 42 140 -68 * 243 319 122 27 chr5 190764857 190765152 -12320380 + L2 LINE L2 2397 2719 -595 220 330 126 0 chr5 190765296 190765399 -12320133 + L2 LINE L2 3136 3251 -21 222 194 0 0 chr5 190765407 190765443 -12320089 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 25 83 0 0 chr5 190766301 190766361 -12319171 + AT_rich Low_complexity Low_complexity 1 60 0 3740 55 0 11 chr5 190768085 190768555 -12316977 - L1PA7 LINE L1 -1 6153 5689 5192 141 79 37 chr5 190768555 190769624 -12315908 - MER11A LTR ERVK -1 1265 153 2008 48 11 48 chr5 190769675 190769907 -12315625 - L1P3 LINE L1 -455 5699 5477 2717 30 3 0 chr5 190769907 190770212 -12315320 - AluY SINE Alu -5 306 1 2008 48 11 48 chr5 190770212 190770249 -12315283 - L1P3 LINE L1 -677 5477 5440 181 228 0 53 chr5 190771419 190771476 -12314056 + MIR SINE MIR 92 145 -63 310 258 72 75 chr5 190771656 190771990 -12313542 + L1MC4a LINE L1 5597 5929 -1879 2477 74 0 0 chr5 190772153 190772450 -12313082 + AluY SINE Alu 1 297 -14 363 23 0 0 chr5 190772761 190772805 -12312727 + (TG)n Simple_repeat Simple_repeat 2 45 0 560 281 23 23 chr5 190773124 190773345 -12312187 - MIR SINE MIR -1 261 41 1395 87 5 0 chr5 190773748 190773933 -12311599 + AluY SINE Alu 122 307 -4 1034 237 70 34 chr5 190773954 190774342 -12311190 + MER113 DNA MER1_type? 1 402 -119 1854 111 16 89 chr5 190774625 190774941 -12310591 + AluSq SINE Alu 1 293 -20 245 232 196 9 chr5 190775309 190775421 -12310111 + MIR SINE MIR 47 179 -83 285 286 26 0 chr5 190775476 190775553 -12309979 + MIR3 SINE MIR 82 160 -48 477 290 68 0 chr5 190775569 190775737 -12309795 + Charlie8 DNA MER1_type 19 196 -2221 326 268 31 0 chr5 190775834 190775936 -12309596 - MIR SINE MIR -96 112 3 411 151 0 0 chr5 190776716 190776789 -12308743 - L1ME3A LINE L1 -5 6165 6093 570 242 180 0 chr5 190777286 190777464 -12308068 + MIR SINE MIR 19 228 -34 446 258 244 0 chr5 190777931 190778144 -12307388 + MLT1L LTR MaLR 344 608 -7 219 222 0 0 chr5 190778634 190778679 -12306853 + MIR SINE MIR 91 135 -127 411 331 22 17 chr5 190778804 190778985 -12306547 + MIR SINE MIR 4 185 -77 329 194 167 49 chr5 190779223 190779367 -12306165 - MIR3 SINE MIR -15 193 33 249 336 55 9 chr5 190779752 190779862 -12305670 - L2 LINE L2 -22 3250 3136 1034 131 0 24 chr5 190780001 190780169 -12305363 + L1PB4 LINE L1 5990 6153 -3 24 0 0 0 chr5 190780169 190780193 -12305339 + AT_rich Low_complexity Low_complexity 1 24 0 2255 72 4 0 chr5 190780243 190780520 -12305012 + AluSx SINE Alu 35 312 0 212 289 0 0 chr5 190780910 190780962 -12304570 + CT-rich Low_complexity Low_complexity 2 53 0 261 57 0 0 chr5 190780962 190780997 -12304535 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 308 238 95 12 chr5 190781005 190781089 -12304443 - L2 LINE L2 -13 3259 3169 477 268 128 0 chr5 190781252 190781416 -12304116 + MIR SINE MIR 8 192 -70 254 247 21 21 chr5 190781439 190781536 -12303996 + L1ME3A LINE L1 5999 6095 -75 375 219 114 18 chr5 190781638 190781752 -12303780 - MLT1A2 LTR MaLR -236 154 30 204 325 123 43 chr5 190781950 190782113 -12303419 + MIR SINE MIR 20 195 -67 1108 263 94 11 chr5 190782120 190782557 -12302975 - MER113 DNA MER1_type? -4 517 45 1429 148 71 3 chr5 190782658 190782941 -12302591 + L1PBa LINE L1 3 304 -6559 711 108 36 0 chr5 190782941 190783052 -12302480 + L1PB1 LINE L1 6036 6150 -1 277 253 63 13 chr5 190783492 190783571 -12301961 + L2 LINE L2 3229 3311 -2 477 264 57 19 chr5 190785572 190785731 -12299801 - MIR3 SINE MIR -8 200 36 819 227 58 70 chr5 190786065 190786462 -12299070 + L1ME3A LINE L1 5775 6166 -4 1409 211 26 26 chr5 190786542 190786846 -12298686 + AluJo SINE Alu 5 308 -4 1307 161 34 22 chr5 190786863 190787130 -12298402 - MER89 LTR ERV1 -14 545 276 440 243 27 0 chr5 190787243 190787354 -12298178 - MER89 LTR ERV1 -445 114 1 912 287 47 28 chr5 190787530 190787959 -12297573 + L1MC4a LINE L1 5466 5902 -1906 195 42 0 0 chr5 190787968 190787992 -12297540 + (CA)n Simple_repeat Simple_repeat 2 25 0 1909 132 25 4 chr5 190788061 190788389 -12297143 + MER7A DNA MER2_type 13 346 0 278 304 97 59 chr5 190788442 190788834 -12296698 + L1MC4a LINE L1 5510 5916 -1892 267 239 33 54 chr5 190789046 190789138 -12296394 - MLT1J2 LTR MaLR -294 156 67 22 35 0 0 chr5 190789315 190789344 -12296188 + AT_rich Low_complexity Low_complexity 1 29 0 447 362 54 54 chr5 190789426 190789813 -12295719 - L2 LINE L2 -1669 1645 1259 2041 118 0 0 chr5 190790290 190790594 -12294938 + AluY SINE Alu 1 304 0 633 272 126 4 chr5 190790707 190791060 -12294472 - MLT2F LTR ERVL -81 582 144 3827 203 18 0 chr5 190791096 190791812 -12293720 + L1PA13 LINE L1 2 730 -6057 27 154 0 0 chr5 190792051 190792090 -12293442 + AT_rich Low_complexity Low_complexity 1 39 0 262 193 60 0 chr5 190792156 190792239 -12293293 - L1MC5 LINE L1 -400 7561 7474 14011 194 41 20 chr5 190792387 190796524 -12289008 + L1PA13 LINE L1 760 4999 -1798 1909 124 0 7 chr5 190796523 190796830 -12288702 + L1PB1 LINE L1 5785 6089 -62 * 25 51 0 0 chr5 190796846 190796885 -12288647 + AT_rich Low_complexity Low_complexity 1 39 0 313 224 15 0 chr5 190796908 190796975 -12288557 - MLT2F LTR ERVL -566 97 30 186 433 47 13 chr5 190797532 190797682 -12287850 - L2 LINE L2 -2052 1262 1108 291 277 40 10 chr5 190798320 190798421 -12287111 - L2 LINE L2 -210 3062 2959 413 324 118 38 chr5 190799589 190799904 -12285628 + L2 LINE L2 8 347 -2967 250 302 31 0 chr5 190800072 190800168 -12285364 + L2 LINE L2 577 675 -2639 251 281 31 0 chr5 190800173 190800269 -12285263 - MER94 DNA DNA -34 100 2 1893 285 77 42 chr5 190800297 190800699 -12284833 + L2 LINE L2 696 1083 -2231 2296 116 16 29 chr5 190800699 190801079 -12284453 - THE1C LTR MaLR 0 375 1 1893 285 77 42 chr5 190801079 190801168 -12284364 + L2 LINE L2 1083 1167 -2147 183 80 0 0 chr5 190801168 190801193 -12284339 + (CA)n Simple_repeat Simple_repeat 2 26 0 1893 285 77 42 chr5 190801193 190801548 -12283984 + L2 LINE L2 1167 1572 -1742 21 0 0 0 chr5 190802580 190802601 -12282931 + AT_rich Low_complexity Low_complexity 1 21 0 403 286 61 48 chr5 190804638 190805216 -12280316 + L1MC/D LINE L1 4400 4984 -1162 1983 167 0 0 chr5 190805355 190805655 -12279877 + AluSx SINE Alu 1 300 -12 266 312 109 36 chr5 190805753 190806173 -12279359 + L1MC/D LINE L1 5295 5745 -2063 31 0 0 0 chr5 190806480 190806511 -12279021 + AT_rich Low_complexity Low_complexity 1 31 0 315 266 8 40 chr5 190807597 190807721 -12277811 + MIR SINE MIR 128 247 -15 2207 104 0 0 chr5 190808576 190808865 -12276667 + AluSg SINE Alu 1 289 -21 1777 162 0 11 chr5 190809991 190810275 -12275257 + AluJb SINE Alu 22 302 -10 2436 107 0 0 chr5 190810794 190811104 -12274428 + AluSx SINE Alu 1 310 -2 29209 83 9 4 chr5 190812219 190817353 -12268179 + L1PA6 LINE L1 999 6152 -2 1684 223 75 24 chr5 190817369 190817664 -12267868 + L1MA9 LINE L1 5474 5807 -505 325 69 17 17 chr5 190817664 190817722 -12267810 + (TG)n Simple_repeat Simple_repeat 2 59 0 1684 223 75 24 chr5 190817722 190817933 -12267599 + L1MA9 LINE L1 5807 6006 -306 439 79 0 0 chr5 190817936 190817999 -12267533 + Tigger3(Golem) DNA MER2_type 2900 2962 -67 1059 222 120 85 chr5 190818180 190818294 -12267238 + L1ME3A LINE L1 5333 5442 -728 180 77 0 0 chr5 190818294 190818320 -12267212 + (TA)n Simple_repeat Simple_repeat 1 26 0 1059 222 120 85 chr5 190818320 190818781 -12266751 + L1ME3A LINE L1 5442 5928 -242 535 322 152 7 chr5 190818784 190819067 -12266465 + LTR16A LTR ERVL 4 327 -123 417 182 220 8 chr5 190819188 190819320 -12266212 + L1ME3A LINE L1 6006 6165 -5 31 26 0 0 chr5 190819343 190819381 -12266151 + AT_rich Low_complexity Low_complexity 1 38 0 222 254 30 15 chr5 190819418 190819485 -12266047 + MIR SINE MIR 72 139 -69 352 324 17 46 chr5 190819526 190819699 -12265833 - MIR SINE MIR -56 206 39 198 0 0 0 chr5 190820054 190820076 -12265456 + (GA)n Simple_repeat Simple_repeat 2 23 0 2020 139 0 24 chr5 190820883 190821177 -12264355 + AluSx SINE Alu 1 287 -25 2746 16 0 0 chr5 190824475 190824782 -12260750 - AluYa5 SINE Alu -4 307 1 781 198 39 0 chr5 190825616 190825798 -12259734 - MER53 DNA DNA 0 189 1 18000 153 48 3 chr5 190825837 190828058 -12257474 + L1M1 LINE L1 17 2137 -5428 2372 76 3 17 chr5 190828058 190828360 -12257172 + AluSg SINE Alu 1 298 -12 18000 153 48 3 chr5 190828360 190828868 -12256664 + L1M1 LINE L1 2137 2621 -4944 195 42 0 0 chr5 190828868 190828892 -12256640 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 18000 153 48 3 chr5 190828892 190829549 -12255983 + L1M1 LINE L1 2621 3545 -4020 745 231 109 50 chr5 190829559 190830126 -12255406 + L1MC/D LINE L1 5168 5786 -383 1267 144 34 84 chr5 190830227 190830654 -12254878 + MSTB LTR MaLR 34 424 -2 986 261 21 39 chr5 190831698 190832035 -12253497 - MER46C DNA MER2_type 0 338 8 291 246 198 8 chr5 190833096 190833222 -12252310 - MLT1J LTR MaLR -38 473 324 386 230 20 30 chr5 190833341 190833427 -12252105 - MLT1J LTR MaLR -369 142 58 357 197 66 0 chr5 190833427 190833503 -12252029 - MER57A LTR ERV1 0 403 323 4848 152 79 4 chr5 190833552 190834320 -12251212 - LTR1B LTR ERV1 0 826 1 514 305 70 33 chr5 190834331 190834694 -12250838 + MER57A LTR ERV1 48 403 0 315 242 0 0 chr5 190834713 190834775 -12250757 + MLT1J LTR MaLR 81 142 -369 1895 152 25 9 chr5 190834868 190835184 -12250348 - LTR1B LTR ERV1 -113 713 393 882 197 11 11 chr5 190835193 190835376 -12250156 - L1 LINE L1 -1216 4930 4748 5505 159 21 30 chr5 190835376 190836447 -12249085 + L1 LINE L1 3674 4735 -1411 419 244 12 0 chr5 190837878 190837960 -12247572 + MLT1G LTR MaLR 206 288 -302 262 211 113 0 chr5 190838060 190838131 -12247401 + MLT1G LTR MaLR 459 537 -18 2067 194 65 10 chr5 190838159 190838557 -12246975 - MSTB LTR MaLR -6 420 1 910 283 54 44 chr5 190839293 190840018 -12245514 + L1M4 LINE L1 2154 2885 -3261 870 274 59 29 chr5 190840043 190840569 -12244963 + L1M4 LINE L1 2862 3403 -2743 4168 315 30 27 chr5 190840619 190842263 -12243269 + L1M2 LINE L1 4 1652 -5516 238 231 0 0 chr5 190842262 190842314 -12243218 + L1M2 LINE L1 2046 2097 -5001 * 9671 230 50 48 chr5 190842291 190843941 -12241591 + L1M2 LINE L1 1968 3613 -3641 2211 79 3 54 chr5 190843941 190844256 -12241276 - AluY SINE Alu -12 299 1 9671 230 50 48 chr5 190844256 190845457 -12240075 + L1M2 LINE L1 3613 4810 -2444 2291 161 5 16 chr5 190845457 190845475 -12240057 + L1PB1 LINE L1 5775 5792 -359 378 0 0 0 chr5 190845475 190845517 -12240015 + (CA)n Simple_repeat Simple_repeat 2 43 0 2291 161 5 16 chr5 190845517 190845877 -12239655 + L1PB1 LINE L1 5792 6149 -2 9671 230 50 48 chr5 190845877 190846068 -12239464 + L1M2 LINE L1 4810 4999 -2255 2204 112 7 0 chr5 190846068 190846371 -12239161 - AluY SINE Alu -6 305 1 9671 230 50 48 chr5 190846371 190847892 -12237640 + L1M2 LINE L1 4999 6511 -743 647 114 0 0 chr5 190847897 190847985 -12237547 + L1P3 LINE L1 326 413 -6048 * 3309 126 43 4 chr5 190847984 190848501 -12237031 + L1P3 LINE L1 910 1446 -5015 277 261 152 0 chr5 190848896 190848988 -12236544 - MIR SINE MIR -36 226 121 235 348 136 17 chr5 190849034 190849152 -12236380 - L2 LINE L2 0 3272 3141 610 267 58 29 chr5 190849164 190849370 -12236162 - MIR SINE MIR -3 259 48 204 359 68 48 chr5 190849571 190849674 -12235858 - L2 LINE L2 -15 3257 3153 3813 139 32 14 chr5 190850112 190850732 -12234800 - L1MA4A LINE L1 -11 6292 5662 557 165 277 27 chr5 190850755 190850979 -12234553 - MER5C DNA MER1_type -41 283 4 208 167 19 19 chr5 190851393 190851447 -12234085 + GA-rich Low_complexity Low_complexity 4 57 0 283 256 38 45 chr5 190852009 190852142 -12233390 - L2 LINE L2 -101 3212 3081 604 223 123 77 chr5 190852146 190852406 -12233126 - LTR33 LTR ERVL -4 517 246 446 238 0 0 chr5 190852749 190852833 -12232699 + MIR3 SINE MIR 87 170 -38 222 302 78 9 chr5 190852844 190852960 -12232572 + MIR3 SINE MIR 12 135 -73 698 275 18 40 chr5 190853081 190853303 -12232229 + MIR SINE MIR 2 218 -44 1160 166 9 38 chr5 190854153 190854364 -12231168 + AluJb SINE Alu 83 287 -25 279 0 0 0 chr5 190854367 190854398 -12231134 + (TAA)n Simple_repeat Simple_repeat 3 33 0 253 308 67 10 chr5 190855116 190855220 -12230312 + MIR SINE MIR 1 110 -152 199 308 39 13 chr5 190855200 190855278 -12230254 - MIR SINE MIR -155 107 28 * 234 0 0 0 chr5 190855591 190855617 -12229915 + (TAA)n Simple_repeat Simple_repeat 2 27 0 492 274 54 49 chr5 190855848 190856039 -12229493 - MIR SINE MIR -44 218 24 212 0 36 0 chr5 190856039 190856067 -12229465 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 492 274 54 49 chr5 190856067 190856079 -12229453 - MIR SINE MIR -238 24 14 251 341 106 24 chr5 190856248 190856418 -12229114 - L2 LINE L2 -2 3270 3087 346 218 0 23 chr5 190856499 190856586 -12228946 + MER4C LTR ERV1 1 85 -380 1603 176 48 67 chr5 190856591 190857139 -12228393 + MER4C LTR ERV1 43 465 0 281 300 100 14 chr5 190857147 190857287 -12228245 + MIR SINE MIR 63 214 -48 672 296 99 67 chr5 190857289 190858052 -12227480 + L2 LINE L2 2472 3268 -4 392 253 117 68 chr5 190859396 190859661 -12225871 - L2 LINE L2 0 3313 3036 375 294 107 40 chr5 190859742 190860014 -12225518 - L2 LINE L2 -469 2845 2556 1024 81 0 0 chr5 190860148 190860271 -12225261 + AluSq/x SINE Alu 1 123 -190 23 0 0 0 chr5 190860807 190860830 -12224702 + AT_rich Low_complexity Low_complexity 1 23 0 1527 229 87 65 chr5 190863525 190863648 -12221884 - LTR9 LTR ERV1 0 612 493 1705 104 127 4 chr5 190863648 190863930 -12221602 + AluSx SINE Alu 1 312 0 1527 229 87 65 chr5 190863930 190864405 -12221127 - LTR9 LTR ERV1 -119 493 1 254 231 0 0 chr5 190865185 190865237 -12220295 + LTR30 LTR ERV1 1 52 -670 2378 95 147 160 chr5 190865237 190865851 -12219681 + LTR12 LTR ERV1 57 2438 0 225 0 0 0 chr5 190865882 190865907 -12219625 + (A)n Simple_repeat Simple_repeat 1 25 0 667 264 30 20 chr5 190866044 190866245 -12219287 + MER20 DNA MER1_type 16 218 -1 1976 83 16 0 chr5 190866303 190866557 -12218975 - AluY SINE Alu -8 303 46 306 282 132 23 chr5 190867053 190867373 -12218159 - L1MC/D LINE L1 -297 5824 5564 355 274 158 0 chr5 190867397 190867612 -12217920 - L1MC/D LINE L1 -2296 5512 5264 28 29 0 0 chr5 190867758 190867793 -12217739 + AT_rich Low_complexity Low_complexity 1 35 0 2043 117 4 0 chr5 190867819 190868093 -12217439 - AluSp SINE Alu -4 309 35 299 291 187 0 chr5 190868141 190868344 -12217188 - L1MC/D LINE L1 -1182 4964 4724 2005 135 13 13 chr5 190868555 190868859 -12216673 - AluSx SINE Alu -8 304 1 460 360 44 4 chr5 190869227 190869452 -12216080 - MIR SINE MIR 0 262 29 258 241 138 0 chr5 190869896 190869983 -12215549 - L1ME3 LINE L1 -2 6160 6062 346 281 167 29 chr5 190870138 190870384 -12215148 - L2 LINE L2 -182 3131 2852 214 184 102 0 chr5 190870985 190871034 -12214498 + L2 LINE L2 3219 3272 0 345 291 119 8 chr5 190871195 190871329 -12214203 + MIR SINE MIR 52 200 -62 561 276 56 47 chr5 190871962 190872027 -12213505 + MIR SINE MIR 31 94 -168 1495 262 83 25 chr5 190872027 190872508 -12213024 - MLT1J LTR MaLR -1 510 2 561 276 56 47 chr5 190872508 190872656 -12212876 + MIR SINE MIR 94 246 -16 233 357 77 7 chr5 190872839 190872982 -12212550 - MIR SINE MIR -108 154 2 468 0 0 0 chr5 190873835 190873887 -12211645 + (TG)n Simple_repeat Simple_repeat 1 52 0 402 290 37 0 chr5 190875238 190875345 -12210187 - L2 LINE L2 -8 3264 3154 226 287 128 11 chr5 190875348 190875442 -12210090 + L2 LINE L2 2968 3072 -241 189 269 58 0 chr5 190875825 190875877 -12209655 - L2 LINE L2 -8 3264 3210 22 0 0 0 chr5 190877416 190877438 -12208094 + AT_rich Low_complexity Low_complexity 1 22 0 858 240 85 83 chr5 190877538 190877983 -12207549 + MLT1C LTR MaLR 22 467 0 362 298 93 24 chr5 190878598 190878803 -12206729 + MIR SINE MIR 34 252 -10 570 200 176 0 chr5 190878906 190879071 -12206461 - MIR SINE MIR -2 260 67 219 159 0 45 chr5 190879388 190879432 -12206100 + MIR SINE MIR 113 154 -108 1035 226 142 7 chr5 190880475 190880763 -12204769 + Cheshire DNA MER1_type 9 335 -2085 1742 159 45 20 chr5 190880775 190881133 -12204399 + Cheshire DNA MER1_type 2054 2420 0 247 286 83 45 chr5 190881602 190881735 -12203797 + MIR3 SINE MIR 4 141 -67 246 105 0 0 chr5 190882713 190882751 -12202781 + (T)n Simple_repeat Simple_repeat 1 38 0 314 192 0 90 chr5 190883531 190883609 -12201923 - MLT1K LTR MaLR -507 81 11 208 244 12 81 chr5 190884049 190884135 -12201397 + MIR SINE MIR 110 189 -73 279 317 127 32 chr5 190884184 190884534 -12200998 + L2 LINE L2 2679 3078 -194 458 304 6 13 chr5 190884813 190884971 -12200561 - L2 LINE L2 -1 3312 3156 191 307 68 0 chr5 190885049 190885137 -12200395 - MIR SINE MIR -114 148 55 1087 256 50 73 chr5 190885551 190886032 -12199500 + L2 LINE L2 2843 3312 -1 515 289 83 11 chr5 190886468 190886648 -12198884 + MIR SINE MIR 52 244 -18 461 278 90 9 chr5 190886778 190887001 -12198531 - MER102a DNA MER1_type -15 315 75 688 186 116 142 chr5 190887093 190887197 -12198335 - L1ME1 LINE L1 -5 6161 6056 228 147 0 0 chr5 190887197 190887231 -12198301 - MER3 DNA MER1_type -160 49 16 688 186 116 142 chr5 190887231 190887404 -12198128 - L1ME1 LINE L1 -110 6056 5859 1692 255 109 48 chr5 190887412 190888643 -12196889 - L1MEc LINE L1 -3379 2701 1463 4383 204 21 12 chr5 190888651 190890283 -12195249 - L1MB8 LINE L1 -22 6156 4513 1090 226 74 95 chr5 190890287 190890424 -12195108 - L1MEc LINE L1 -4621 1459 1321 2271 120 0 0 chr5 190890424 190890733 -12194799 + AluSc SINE Alu 1 309 0 1090 226 74 95 chr5 190890733 190891297 -12194235 - L1MEc LINE L1 -4759 1321 773 1518 238 67 36 chr5 190891308 190891754 -12193778 - MLT1D LTR MaLR 0 505 46 272 263 0 13 chr5 190891763 190891839 -12193693 - MLT1D-int LTR MaLR -5 1730 1656 1119 242 37 58 chr5 190891852 190892232 -12193300 - L1MEc LINE L1 -5310 760 389 319 250 37 79 chr5 190892273 190892437 -12193095 - L1MEc LINE L1 -5882 188 32 782 242 4 23 chr5 190892458 190892680 -12192852 - L1ME1 LINE L1 -293 5858 5655 194 132 191 59 chr5 190893260 190893328 -12192204 - MIR SINE MIR -73 189 113 470 250 78 21 chr5 190894079 190894221 -12191311 - L1MC/D LINE L1 -299 5822 5694 220 260 82 0 chr5 190895560 190895633 -12189899 - MER91C DNA MER1_type -27 113 35 194 192 115 0 chr5 190896266 190896318 -12189214 + L3 LINE CR1 1422 1479 -98 2212 108 0 3 chr5 190896427 190896723 -12188809 + AluSq SINE Alu 5 299 -14 389 279 44 7 chr5 190896900 190897036 -12188496 + MIR SINE MIR 103 243 -19 784 176 0 0 chr5 190897103 190897228 -12188304 + FLAM_A SINE Alu 1 125 -8 345 47 0 0 chr5 190897248 190897291 -12188241 + (TAAAA)n Simple_repeat Simple_repeat 1 43 0 543 267 43 0 chr5 190897553 190897714 -12187818 + MIR SINE MIR 66 233 -29 375 314 106 10 chr5 190897773 190897980 -12187552 - MIR SINE MIR -26 236 10 187 295 161 27 chr5 190898978 190899090 -12186442 - MIR3 SINE MIR -67 141 15 718 277 71 18 chr5 190899291 190899573 -12185959 + MER113 DNA MER1_type? 182 478 -43 678 202 191 6 chr5 190900674 190900847 -12184685 + MIR SINE MIR 37 241 -21 323 267 50 31 chr5 190902238 190902397 -12183135 - MIR SINE MIR -65 143 25 374 244 69 8 chr5 190902471 190902602 -12182930 - MIR SINE MIR -99 163 25 265 327 51 33 chr5 190903114 190903328 -12182204 - L2 LINE L2 -47 3225 3008 285 319 11 0 chr5 190903917 190904011 -12181521 - MIR SINE MIR -57 151 57 497 309 48 24 chr5 190904039 190904249 -12181283 - MIR SINE MIR -13 249 35 1003 223 90 61 chr5 190904274 190904719 -12180813 + L1MC4 LINE L1 7585 8042 0 2233 112 0 7 chr5 190904887 190905191 -12180341 - AluSg SINE Alu -8 302 1 2019 113 50 0 chr5 190905894 190906176 -12179356 + AluSx SINE Alu 1 296 -16 423 268 82 41 chr5 190906242 190906511 -12179021 + L1ME LINE L1 5506 5785 -336 1261 191 73 75 chr5 190906555 190906926 -12178606 + MLT1A2 LTR MaLR 1 370 -4 290 370 44 10 chr5 190907126 190907329 -12178203 - MIR SINE MIR -33 229 20 213 234 207 27 chr5 190909065 190909176 -12176356 + MIR SINE MIR 131 261 -1 235 291 81 0 chr5 190909891 190909977 -12175555 + MIR SINE MIR 48 140 -122 361 290 10 10 chr5 190910033 190910133 -12175399 + MER81 DNA DNA 10 109 -5 187 273 0 0 chr5 190911016 190911060 -12174472 - MIR SINE MIR -62 146 103 566 237 16 41 chr5 190911229 190911423 -12174109 - MER5A DNA MER1_type 0 189 1 2527 67 3 6 chr5 190911591 190911903 -12173629 - AluY SINE Alu 0 311 1 208 267 67 44 chr5 190913256 190913346 -12172186 + MIR SINE MIR 53 144 -118 1745 152 10 21 chr5 190913714 190914004 -12171528 + AluJo SINE Alu 17 303 -9 436 231 109 19 chr5 190914853 190915009 -12170523 + MIR SINE MIR 79 248 -14 1290 108 49 0 chr5 190915624 190915858 -12169674 + AluSg/x SINE Alu 70 313 0 211 211 53 79 chr5 190916041 190916155 -12169377 - MER5A DNA MER1_type -38 151 41 * 369 256 68 8 chr5 190916054 190916171 -12169361 + MER5A DNA MER1_type 59 182 -7 836 212 5 5 chr5 190916996 190917185 -12168347 + MER53 DNA DNA 1 189 0 744 201 113 38 chr5 190918830 190919047 -12166485 - MER113 DNA MER1_type? -107 414 164 2218 105 7 3 chr5 190919047 190919343 -12166189 - AluSg SINE Alu -13 297 1 744 201 113 38 chr5 190919343 190919443 -12166089 - MER113 DNA MER1_type? -357 164 73 243 278 0 56 chr5 190919619 190919709 -12165823 - MIR3 SINE MIR -49 159 75 467 288 99 21 chr5 190920126 190920369 -12165163 - MIR SINE MIR 0 262 1 297 374 122 5 chr5 190923187 190923409 -12162123 - L3 LINE CR1 -85 1492 1245 593 244 155 0 chr5 190923410 190923578 -12161954 - MLT1L LTR MaLR 0 615 422 467 278 66 0 chr5 190923652 190923803 -12161729 - MLT1L LTR MaLR -350 265 105 225 331 55 25 chr5 190924137 190924300 -12161232 + L2 LINE L2 2729 2896 -418 21 36 0 0 chr5 190924585 190924613 -12160919 + AT_rich Low_complexity Low_complexity 1 28 0 546 270 111 0 chr5 190924892 190925081 -12160451 - MIR SINE MIR -6 256 47 4814 241 159 12 chr5 190925084 190927062 -12158470 + HAL1 LINE L1 86 2355 -152 316 204 257 35 chr5 190927145 190927258 -12158274 + HAL1 LINE L1 2368 2505 -2 43817 32 22 0 chr5 190927388 190933407 -12152125 - L1PA2 LINE L1 -2 6153 5 26 30 0 0 chr5 190933799 190933832 -12151700 + AT_rich Low_complexity Low_complexity 1 33 0 236 309 58 43 chr5 190934233 190934372 -12151160 - MLT1K LTR MaLR -241 347 207 190 322 0 17 chr5 190934750 190934809 -12150723 + L2 LINE L2 3207 3264 -8 2066 108 0 19 chr5 190936651 190936958 -12148574 + AluSq SINE Alu 1 301 -12 306 87 0 0 chr5 190936974 190937020 -12148512 + (TA)n Simple_repeat Simple_repeat 1 46 0 532 233 87 52 chr5 190939308 190939480 -12146052 - MER5B DNA MER1_type 0 178 1 469 282 138 0 chr5 190941666 190941847 -12143685 - MIR SINE MIR -6 256 51 222 192 0 167 chr5 190941872 190941950 -12143582 + MER5A DNA MER1_type 97 161 -28 22 70 0 0 chr5 190943084 190943127 -12142405 + AT_rich Low_complexity Low_complexity 1 43 0 228 286 16 0 chr5 190943228 190943291 -12142241 - L2 LINE L2 -6 3266 3203 564 247 165 0 chr5 190943314 190943472 -12142060 + MER5A DNA MER1_type 1 184 -5 313 330 10 10 chr5 190943512 190943609 -12141923 + MER5A DNA MER1_type 56 152 -37 512 208 18 24 chr5 190943775 190943943 -12141589 + (TATATG)n Simple_repeat Simple_repeat 6 172 0 199 243 225 27 chr5 190946854 190946965 -12138567 - MIR SINE MIR -110 152 20 200 248 140 102 chr5 190947057 190947214 -12138318 - MIR SINE MIR -74 188 26 * 260 234 207 27 chr5 190947208 190947319 -12138213 + MIR SINE MIR 131 261 -1 266 296 80 0 chr5 190948020 190948120 -12137412 + MIR SINE MIR 35 141 -67 367 290 10 10 chr5 190948176 190948276 -12137256 + MER81 DNA DNA 10 109 -5 214 234 13 13 chr5 190948999 190949076 -12136456 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 451 181 0 47 chr5 190949469 190949596 -12135936 - MER96B DNA MER1_type? -236 181 61 219 264 28 42 chr5 190949611 190949683 -12135849 - MIR SINE MIR -70 192 122 208 174 257 101 chr5 190950723 190950832 -12134700 - MIR3 SINE MIR -2 206 81 226 359 29 0 chr5 190951383 190951486 -12134046 + MIR SINE MIR 86 191 -71 1977 169 103 19 chr5 190951515 190951940 -12133592 + MER65C LTR ERV1 1 461 0 1379 209 44 3 chr5 190952142 190952439 -12133093 + AluJo SINE Alu 3 311 -1 2426 78 0 0 chr5 190952590 190952897 -12132635 - AluY SINE Alu -3 308 2 211 272 32 112 chr5 190953346 190953471 -12132061 - MIR SINE MIR -120 142 28 508 328 106 17 chr5 190953524 190953759 -12131773 + MIR SINE MIR 2 257 -5 217 295 36 78 chr5 190953909 190954075 -12131457 - MIR3 SINE MIR -32 176 18 602 285 32 27 chr5 190954168 190954354 -12131178 + MIR SINE MIR 23 209 -53 698 306 133 26 chr5 190954714 190955415 -12130117 + L2 LINE L2 2490 3272 0 207 297 0 0 chr5 190956462 190956563 -12128969 + (CA)n Simple_repeat Simple_repeat 2 102 0 290 188 0 43 chr5 190956931 190957000 -12128532 - MER96B DNA MER1_type? -109 66 1 544 309 105 54 chr5 190957060 190957432 -12128100 + L2 LINE L2 2864 3254 -18 438 227 81 64 chr5 190957639 190957811 -12127721 + L2 LINE L2 3138 3312 -1 594 210 22 14 chr5 190958088 190958226 -12127306 - MIR SINE MIR -76 186 48 254 125 25 0 chr5 190958655 190958695 -12126837 - MIR SINE MIR -113 149 109 1027 225 43 94 chr5 190960033 190960210 -12125322 + MER93a LTR ERV1 66 218 -184 2348 80 0 13 chr5 190960210 190960521 -12125011 - AluSc SINE Alu 0 309 3 1027 225 43 94 chr5 190960521 190960694 -12124838 + MER93a LTR ERV1 218 398 -4 480 218 49 28 chr5 190961116 190961258 -12124274 + MIR3 SINE MIR 13 157 -51 943 257 5 0 chr5 190961575 190961793 -12123739 + MER58A DNA MER1_type 6 224 0 363 261 30 37 chr5 190962160 190962294 -12123238 - MER5A DNA MER1_type 0 189 57 2311 47 0 4 chr5 190962328 190962607 -12122925 + AluY SINE Alu 23 300 -11 293 186 237 21 chr5 190964403 190964461 -12121071 - MIR3 SINE MIR -25 183 139 1903 85 0 0 chr5 190964461 190964709 -12120823 + AluSc SINE Alu 55 302 -7 293 186 237 21 chr5 190964709 190964747 -12120785 - MIR3 SINE MIR -69 139 66 2245 82 16 3 chr5 190965077 190965383 -12120149 + AluSx SINE Alu 1 310 -2 293 271 93 17 chr5 190965774 190965892 -12119640 - L2 LINE L2 -5 3308 3182 249 137 26 95 chr5 190965928 190966118 -12119414 + G-rich Low_complexity Low_complexity 2 178 0 186 255 108 29 chr5 190966118 190966220 -12119312 - L2 LINE L2 -203 3110 3001 196 309 62 0 chr5 190966871 190966952 -12118580 + MIR SINE MIR 46 131 -77 296 274 71 26 chr5 190967028 190967141 -12118391 + MIR3 SINE MIR 82 199 -9 248 310 31 31 chr5 190967131 190967260 -12118272 + MER5A DNA MER1_type 36 164 -25 * 198 209 0 0 chr5 190967570 190967613 -12117919 + G-rich Low_complexity Low_complexity 5 47 0 342 258 8 76 chr5 190967614 190967746 -12117786 - MER112 DNA MER1_type -102 158 36 2164 93 14 0 chr5 190968337 190968627 -12116905 + AluSq SINE Alu 1 294 -19 2180 68 0 4 chr5 190968895 190969173 -12116359 - AluY SINE Alu -16 295 19 437 323 50 23 chr5 190969955 190970175 -12115357 - MIR SINE MIR -16 246 21 721 262 129 4 chr5 190970255 190970488 -12115044 - MIR SINE MIR 0 262 1 337 311 66 0 chr5 190970535 190970641 -12114891 - MIR3 SINE MIR -40 168 56 282 318 135 70 chr5 190971319 190971734 -12113798 + L2 LINE L2 2830 3271 -1 4859 234 111 29 chr5 190971820 190972365 -12113167 - L1MEc LINE L1 -4595 1801 1302 2111 118 0 0 chr5 190972365 190972662 -12112870 - AluSx SINE Alu -15 297 1 4859 234 111 29 chr5 190972662 190973748 -12111784 - L1MEc LINE L1 -5094 1302 37 382 333 64 6 chr5 190973805 190973961 -12111571 - Charlie8 DNA MER1_type -2156 261 97 697 187 160 0 chr5 190974090 190974240 -12111292 + MER3 DNA MER1_type 20 193 -16 712 304 113 0 chr5 190974510 190974757 -12110775 + Charlie8 DNA MER1_type 2 276 -2141 198 0 0 0 chr5 190974896 190974918 -12110614 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 348 197 16 0 chr5 190974936 190974997 -12110535 + Charlie8 DNA MER1_type 1350 1411 -1006 506 237 124 40 chr5 190975009 190975186 -12110346 - MER117 DNA MER1_type -1 196 5 496 233 114 62 chr5 190975722 190975932 -12109600 - Charlie8 DNA MER1_type -2152 265 45 332 312 79 24 chr5 190976194 190976400 -12109132 - MIR SINE MIR -30 232 17 872 225 22 45 chr5 190976619 190976841 -12108691 + MIR SINE MIR 14 230 -32 1045 74 17 23 chr5 190977202 190977378 -12108154 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 475 296 65 90 chr5 190977899 190978423 -12107109 + MLT1J LTR MaLR 1 511 0 1019 98 11 11 chr5 190978526 190978700 -12106832 + (GAAA)n Simple_repeat Simple_repeat 2 175 0 244 153 0 34 chr5 190978703 190978762 -12106770 + GA-rich Low_complexity Low_complexity 5 61 0 639 60 0 0 chr5 190978775 190978859 -12106673 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 246 274 8 60 chr5 190979247 190979364 -12106168 - MIR3 SINE MIR -16 192 82 292 247 41 0 chr5 190979607 190979680 -12105852 + MIR3 SINE MIR 79 154 -54 211 364 64 36 chr5 190979714 190979824 -12105708 + L2 LINE L2 3160 3272 0 412 305 142 39 chr5 190979831 190980113 -12105419 + L3 LINE CR1 1261 1571 -6 230 208 56 28 chr5 190981495 190981567 -12103965 - L1ME LINE L1 -339 5782 5709 351 247 228 25 chr5 190981570 190981732 -12103800 - MIR SINE MIR 0 262 68 184 270 27 68 chr5 190982517 190982591 -12102941 - MER5A DNA MER1_type -83 106 36 * 207 278 42 14 chr5 190982542 190982614 -12102918 + MER5B DNA MER1_type 105 178 0 278 244 24 24 chr5 190982634 190982716 -12102816 - MIR SINE MIR -68 140 59 203 238 95 32 chr5 190982796 190982859 -12102673 - L2 LINE L2 -56 3257 3191 648 266 0 6 chr5 190982995 190983153 -12102379 - MIR SINE MIR -48 214 58 225 322 96 9 chr5 190984046 190984161 -12101371 + MIR3 SINE MIR 81 205 -3 209 296 0 30 chr5 190984407 190984510 -12101022 + MIR SINE MIR 96 146 -62 373 371 62 14 chr5 190984714 190984924 -12100608 + MIR SINE MIR 21 240 -22 228 289 72 0 chr5 190985938 190986021 -12099511 + MIR SINE MIR 80 168 -94 315 0 0 0 chr5 190986356 190986391 -12099141 + (CA)n Simple_repeat Simple_repeat 1 35 0 2221 93 3 10 chr5 190986735 190987048 -12098484 - AluSp SINE Alu 0 313 3 1571 196 0 22 chr5 190987420 190987736 -12097796 - AluJo SINE Alu -3 309 1 424 301 39 20 chr5 190988020 190988173 -12097359 - MIR SINE MIR -100 162 7 235 171 316 13 chr5 190988176 190988252 -12097280 - MIR SINE MIR -140 122 24 1731 136 11 7 chr5 190988996 190989269 -12096263 + AluSx SINE Alu 27 300 -12 2027 125 0 3 chr5 190989318 190989623 -12095909 - AluSx SINE Alu -8 304 1 335 308 19 19 chr5 190991488 190991595 -12093937 - MIR SINE MIR -63 145 39 881 98 0 0 chr5 190992073 190992205 -12093327 + AluY SINE Alu 173 304 -7 288 260 0 13 chr5 190992229 190992306 -12093226 + LTR67 LTR ERVL 471 546 -11 262 224 136 88 chr5 190992375 190992500 -12093032 + MIR3 SINE MIR 11 141 -67 1235 130 0 0 chr5 190992758 190992943 -12092589 + AluSg/x SINE Alu 125 309 -3 552 254 70 38 chr5 190993865 190994078 -12091454 + MIR SINE MIR 11 230 -32 298 253 123 26 chr5 190994439 190994593 -12090939 - MER102b DNA MER1_type -50 291 123 1909 208 35 52 chr5 190994626 190995140 -12090392 + MLT1D LTR MaLR 1 505 0 180 0 0 0 chr5 190995767 190995787 -12089745 + (TTA)n Simple_repeat Simple_repeat 2 21 0 392 220 110 0 chr5 190996308 190996408 -12089124 - L2 LINE L2 0 3313 3203 216 191 24 0 chr5 190996410 190996452 -12089080 + (ATG)n Simple_repeat Simple_repeat 2 44 0 896 215 63 0 chr5 190996591 190996782 -12088750 - MER3 DNA MER1_type -6 203 1 672 284 49 0 chr5 190996813 190996996 -12088536 + MIR SINE MIR 47 238 -24 857 264 126 7 chr5 190997024 190997524 -12088008 - L2 LINE L2 -146 3167 2602 665 258 208 21 chr5 190997550 190997887 -12087645 + L2 LINE L2 2914 3313 0 369 242 31 39 chr5 190997931 190998059 -12087473 - MIR3 SINE MIR -76 132 6 458 250 41 77 chr5 190998909 190999105 -12086427 - L2 LINE L2 0 3313 3125 219 280 240 0 chr5 191000192 191000267 -12085265 + L2 LINE L2 3183 3275 -38 776 228 107 55 chr5 191000925 191001282 -12084250 - MER57A LTR ERV1 0 403 47 567 319 60 3 chr5 191001335 191001617 -12083915 - L1ME4a LINE L1 -239 5882 5585 317 228 243 7 chr5 191001904 191002040 -12083492 + MIR SINE MIR 6 173 -89 246 128 0 0 chr5 191002651 191002690 -12082842 + (CATTT)n Simple_repeat Simple_repeat 1 39 0 240 218 45 91 chr5 191003624 191003674 -12081858 + LTR67 LTR ERVL 450 501 -56 1765 146 6 53 chr5 191003674 191003995 -12081537 - AluSx SINE Alu -6 306 1 240 218 45 91 chr5 191003995 191004054 -12081478 + LTR67 LTR ERVL 501 554 -3 319 253 12 12 chr5 191005357 191005440 -12080092 + MIR SINE MIR 70 152 -110 700 127 110 0 chr5 191005480 191005598 -12079934 - L1MB1 LINE L1 -521 5813 5683 2013 157 28 0 chr5 191005598 191005954 -12079578 + L1MB1 LINE L1 5802 6168 0 1412 233 45 49 chr5 191007498 191007945 -12077587 - MLT1C LTR MaLR -17 450 6 791 243 34 25 chr5 191008529 191009633 -12075899 + L1ME1 LINE L1 3968 5249 -897 11927 153 26 27 chr5 191009650 191011688 -12073844 + Ricksha_c DNA DNA 8 2043 -3 3436 235 50 14 chr5 191011689 191012552 -12072980 + L1ME1 LINE L1 5255 6148 -18 252 0 0 0 chr5 191013053 191013081 -12072451 + (TA)n Simple_repeat Simple_repeat 1 28 0 1753 172 33 18 chr5 191013796 191014127 -12071405 + L1MC3 LINE L1 7105 7440 -345 1289 105 0 6 chr5 191014127 191014308 -12071224 + AluSg SINE Alu 64 243 -67 629 153 68 45 chr5 191014308 191014485 -12071047 + L1MC3 LINE L1 7595 7775 -10 350 255 200 35 chr5 191015378 191015633 -12069899 + L2 LINE L2 1858 2154 -1160 639 202 157 11 chr5 191015745 191015923 -12069609 - MIR SINE MIR -9 253 50 559 240 6 56 chr5 191016054 191016233 -12069299 - MER69A DNA AcHobo 0 177 8 546 256 0 0 chr5 191017221 191017385 -12068147 + (TCCA)n Simple_repeat Simple_repeat 3 166 0 411 252 0 0 chr5 191017408 191017519 -12068013 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 515 282 222 44 chr5 191017522 191017967 -12067565 - L2 LINE L2 -4 3309 2798 375 278 53 23 chr5 191017990 191018123 -12067409 + MIR SINE MIR 37 173 -89 381 22 0 0 chr5 191018856 191018902 -12066630 + (CA)n Simple_repeat Simple_repeat 2 47 0 4755 151 75 12 chr5 191019891 191020740 -12064792 - MER4D LTR ERV1 0 903 1 276 191 19 9 chr5 191022596 191022701 -12062831 + GA-rich Low_complexity Low_complexity 2 107 0 2174 114 0 0 chr5 191022812 191023118 -12062414 + AluSx SINE Alu 1 306 -6 399 282 118 12 chr5 191023391 191023561 -12061971 + MIR SINE MIR 56 243 -19 408 227 1 79 chr5 191023863 191024026 -12061506 + MIR SINE MIR 35 183 -56 499 269 75 6 chr5 191024335 191024495 -12061037 + MIR SINE MIR 83 253 -9 296 109 43 0 chr5 191025176 191025222 -12060310 + MIR SINE MIR 96 143 -65 520 303 59 34 chr5 191025556 191025794 -12059738 + MIR SINE MIR 19 262 0 * 562 315 22 0 chr5 191025792 191025973 -12059559 - MIR SINE MIR -15 247 63 395 320 39 8 chr5 191025973 191026101 -12059431 - L2 LINE L2 0 3272 3141 288 53 0 0 chr5 191027507 191027545 -12057987 + (TG)n Simple_repeat Simple_repeat 2 39 0 2148 106 3 3 chr5 191028184 191028485 -12057047 - AluSq SINE Alu -12 301 1 449 217 46 80 chr5 191028928 191029103 -12056429 - MIR SINE MIR -34 228 60 1879 209 0 0 chr5 191029191 191029531 -12056001 - MER7A DNA MER2_type 0 346 9 235 282 99 0 chr5 191029576 191029647 -12055885 - MIR3 SINE MIR -36 172 95 375 259 12 0 chr5 191030666 191030747 -12054785 - MER81 DNA DNA -30 84 3 4457 140 46 33 chr5 191031287 191032180 -12053352 - MER4D LTR ERV1 0 866 1 949 274 94 2 chr5 191032182 191032711 -12052821 - L2 LINE L2 -9 3304 2716 205 263 116 21 chr5 191033271 191033366 -12052166 - L2 LINE L2 0 3272 3169 * 373 285 95 7 chr5 191033365 191033502 -12052030 + MER5A DNA MER1_type 38 186 -3 820 221 152 45 chr5 191033582 191034002 -12051530 - MLT1C LTR MaLR -2 465 1 194 371 34 17 chr5 191034045 191034220 -12051312 - L2 LINE L2 -755 2559 2382 563 248 0 34 chr5 191035474 191035623 -12049909 + MIR SINE MIR 93 236 -26 426 245 82 97 chr5 191035770 191035966 -12049566 + L2 LINE L2 3116 3308 -5 724 215 246 36 chr5 191036075 191036581 -12048951 + LTR50 LTR ERVL 96 792 -3 486 273 91 36 chr5 191036815 191037035 -12048497 + MIR SINE MIR 30 261 -1 485 250 118 25 chr5 191038072 191038276 -12047256 - MIR SINE MIR -27 235 13 * 760 301 98 25 chr5 191038253 191038609 -12046923 + L2 LINE L2 2932 3313 0 277 224 75 90 chr5 191039292 191039426 -12046106 + L2 LINE L2 3182 3313 0 2432 85 0 3 chr5 191039471 191039766 -12045766 - AluY SINE Alu -17 294 1 181 196 20 20 chr5 191043560 191043611 -12041921 - L2 LINE L2 -14 3258 3208 306 305 50 35 chr5 191044234 191044375 -12041157 + L2 LINE L2 3127 3269 -3 305 272 228 0 chr5 191044835 191044971 -12040561 + MIR SINE MIR 89 255 -7 1864 171 13 0 chr5 191045137 191045435 -12040097 - AluJb SINE Alu -10 302 1 378 296 28 51 chr5 191046075 191046251 -12039281 + MIR SINE MIR 22 193 -69 296 196 120 43 chr5 191046270 191046362 -12039170 - MER96 DNA MER1_type? -76 99 1 322 201 166 11 chr5 191046362 191046476 -12039056 - MIR SINE MIR -65 143 33 375 285 120 10 chr5 191047913 191048113 -12037419 + MIR SINE MIR 30 251 -11 188 179 77 0 chr5 191049116 191049155 -12036377 + MIR SINE MIR 20 61 -201 1402 167 42 74 chr5 191049175 191049552 -12035980 - MLT1A1 LTR MaLR 0 365 1 345 290 70 0 chr5 191049553 191049653 -12035879 + MIR3 SINE MIR 93 199 -9 473 341 23 14 chr5 191049678 191049892 -12035640 - MIR SINE MIR -22 240 25 1657 204 56 11 chr5 191050887 191051260 -12034272 + MLT1B LTR MaLR 1 390 0 1899 121 51 91 chr5 191051299 191051610 -12033922 - L1MB3 LINE L1 -2 6181 5892 1922 137 0 18 chr5 191051610 191051895 -12033637 - AluJb SINE Alu -12 300 21 1899 121 51 91 chr5 191051895 191052036 -12033496 - L1MB3 LINE L1 -291 5892 5747 306 298 48 60 chr5 191052043 191052211 -12033321 + L2 LINE L2 2694 2859 -455 1294 176 61 4 chr5 191052383 191052644 -12032888 - L1MA9 LINE L1 -31 6281 6006 442 234 48 40 chr5 191052645 191052769 -12032763 + L2 LINE L2 3164 3288 -25 195 237 250 0 chr5 191052793 191052869 -12032663 - MIR SINE MIR -72 136 42 296 296 91 59 chr5 191053298 191053518 -12032014 + MIR SINE MIR 28 254 -8 266 317 35 69 chr5 191054572 191054651 -12030881 + L2 LINE L2 3132 3206 -66 2005 113 18 0 chr5 191054651 191055084 -12030448 + AluSq SINE Alu 6 443 0 266 317 35 69 chr5 191055084 191055148 -12030384 + L2 LINE L2 3206 3271 -1 678 267 98 69 chr5 191055446 191055862 -12029670 + L1ME4a LINE L1 5613 6016 -105 279 0 0 0 chr5 191055862 191055893 -12029639 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2114 114 0 0 chr5 191055895 191056176 -12029356 - AluSc SINE Alu -28 281 1 678 267 98 69 chr5 191056176 191056246 -12029286 + L1ME4a LINE L1 6016 6116 -5 314 187 108 90 chr5 191056531 191056697 -12028835 + L1MC4 LINE L1 7874 8042 0 563 286 30 69 chr5 191056715 191056946 -12028586 + MIR SINE MIR 2 223 -39 353 329 110 7 chr5 191057870 191058025 -12027507 - MIR SINE MIR -6 256 86 296 426 44 12 chr5 191058559 191058810 -12026722 + L3 LINE CR1 199 457 -1120 668 278 91 4 chr5 191059102 191059332 -12026200 + MIR SINE MIR 13 262 0 2458 218 98 45 chr5 191059499 191060248 -12025284 - MER21B LTR ERV1 -57 806 19 1865 212 26 19 chr5 191061006 191061469 -12024063 - Charlie1b DNA MER1_type -2 521 56 21 36 0 0 chr5 191061813 191061841 -12023691 + AT_rich Low_complexity Low_complexity 1 28 0 671 137 48 48 chr5 191062724 191062870 -12022662 - L1MD1 LINE L1 0 6242 6097 182 301 165 8 chr5 191063263 191063396 -12022136 + MIR SINE MIR 14 167 -95 * 702 292 102 0 chr5 191063368 191063604 -12021928 - MIR SINE MIR -1 261 2 2611 57 0 10 chr5 191063761 191064075 -12021457 - AluY SINE Alu 0 311 1 1897 83 0 18 chr5 191064094 191064371 -12021161 - L1PA13 LINE L1 -124 6039 5768 868 94 0 0 chr5 191064372 191064500 -12021032 + L1PA13 LINE L1 6035 6162 -1 182 273 0 0 chr5 191064598 191064642 -12020890 - MIR SINE MIR -62 146 103 211 315 158 8 chr5 191064680 191064807 -12020725 - L3 LINE CR1 -6 1571 1426 624 237 16 41 chr5 191064811 191065005 -12020527 - MER5A DNA MER1_type 0 189 1 2551 74 3 0 chr5 191065174 191065484 -12020048 - AluY SINE Alu 0 311 1 375 268 89 75 chr5 191065622 191065835 -12019697 - L1ME4a LINE L1 -4 6117 5902 223 267 67 44 chr5 191066837 191066927 -12018605 + MIR SINE MIR 53 144 -118 1773 159 7 17 chr5 191067295 191067585 -12017947 + AluJo SINE Alu 17 303 -9 506 236 92 35 chr5 191068434 191068608 -12016924 + MIR SINE MIR 79 262 0 302 308 131 8 chr5 191069860 191069990 -12015542 - MER5B DNA MER1_type -23 155 10 487 67 13 0 chr5 191070263 191070338 -12015194 - AluSp/q SINE Alu -6 307 232 637 174 7 7 chr5 191070537 191070675 -12014857 + GA-rich Low_complexity Low_complexity 4 141 0 509 315 64 18 chr5 191070915 191071134 -12014398 - MIR SINE MIR 0 262 34 689 190 11 46 chr5 191071684 191071858 -12013674 + MER5B DNA MER1_type 4 171 -7 221 230 54 40 chr5 191071850 191071924 -12013608 - MIR3 SINE MIR -36 172 98 * 467 292 154 23 chr5 191072256 191072561 -12012971 + L3 LINE CR1 1158 1502 -75 331 190 0 0 chr5 191073273 191073331 -12012201 - MIR SINE MIR -69 139 82 969 215 160 74 chr5 191073333 191073449 -12012083 + MLT1D LTR MaLR 1 106 -361 2250 89 10 22 chr5 191073449 191073763 -12011769 + AluY SINE Alu 1 310 -1 969 215 160 74 chr5 191073763 191074091 -12011441 + MLT1D LTR MaLR 106 455 -12 252 315 11 11 chr5 191076016 191076108 -12009424 + L3b LINE CR1 1314 1405 -178 292 318 34 19 chr5 191076310 191076503 -12009029 + MIR SINE MIR 29 262 0 347 190 0 13 chr5 191077386 191077465 -12008067 + MIR SINE MIR 60 137 -71 2015 142 11 0 chr5 191077847 191078128 -12007404 + AluSx SINE Alu 7 290 -22 336 260 47 16 chr5 191079224 191079351 -12006181 - MIR SINE MIR -42 220 90 308 222 197 8 chr5 191079350 191079467 -12006065 + MIR SINE MIR 95 233 -29 * 1314 266 117 33 chr5 191079467 191080016 -12005516 + MLT1G1 LTR MaLR 1 595 0 2061 148 0 3 chr5 191080151 191080454 -12005078 + AluSx SINE Alu 5 306 -6 180 206 0 0 chr5 191080528 191080562 -12004970 - L2 LINE L2 -18 3295 3262 185 132 26 0 chr5 191080564 191080602 -12004930 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 231 239 101 57 chr5 191080651 191080763 -12004769 - MIR3 SINE MIR -97 111 2 284 307 33 47 chr5 191081876 191082026 -12003506 + L2 LINE L2 3109 3256 -57 231 179 18 0 chr5 191082095 191082151 -12003381 - L1ME LINE L1 -235 5886 5830 4480 162 7 0 chr5 191082197 191082969 -12002563 - L1PA16 LINE L1 -1 6165 5389 476 211 206 34 chr5 191083541 191083716 -12001816 - MER63A DNA MER1_type -4 206 2 306 265 107 46 chr5 191083908 191083956 -12001576 - LTR33 LTR ERVL -306 215 171 5580 120 23 38 chr5 191083956 191084873 -12000659 - MER4D LTR ERV1 0 903 1 306 265 107 46 chr5 191084873 191085020 -12000512 - LTR33 LTR ERVL -350 171 8 3337 119 20 11 chr5 191085275 191085882 -11999650 - MER4B LTR ERV1 -1 778 2 326 291 48 51 chr5 191085883 191086196 -11999336 - L1ME LINE L1 -438 5683 5372 259 174 0 0 chr5 191086442 191086488 -11999044 - MIR3 SINE MIR -8 200 155 857 214 23 6 chr5 191086491 191086664 -11998868 - MER41D LTR ERV1 0 557 382 602 307 97 9 chr5 191087076 191087542 -11997990 - L1ME4a LINE L1 -4 6117 5611 315 286 86 0 chr5 191087602 191087707 -11997825 - MIR SINE MIR -58 150 37 2026 146 32 22 chr5 191087786 191088157 -11997375 - THE1C LTR MaLR 0 375 1 567 280 78 21 chr5 191088184 191088377 -11997155 - MIR SINE MIR 0 262 59 797 205 89 16 chr5 191088399 191088589 -11996943 + MER3 DNA MER1_type 1 204 -5 1794 172 21 0 chr5 191089093 191089383 -11996149 + AluJb SINE Alu 3 298 -14 240 156 22 0 chr5 191089392 191089437 -11996095 - L2 LINE L2 -19 3253 3208 1272 219 58 55 chr5 191089454 191089906 -11995626 - MLT1C LTR MaLR -5 462 10 818 272 64 35 chr5 191089955 191090330 -11995202 - MLT1J2 LTR MaLR 0 450 65 254 272 36 32 chr5 191090457 191090552 -11994980 - MIR SINE MIR -46 162 67 245 420 47 0 chr5 191091197 191091347 -11994185 + L2 LINE L2 3098 3254 -18 862 247 163 24 chr5 191091976 191092420 -11993112 - MLT1H LTR MaLR 0 549 3 418 298 20 13 chr5 191092525 191092676 -11992856 - L1ME LINE L1 -339 5782 5631 1960 144 3 32 chr5 191092801 191093113 -11992419 - AluSx SINE Alu -9 303 1 578 283 102 6 chr5 191093937 191094103 -11991429 + MIR SINE MIR 4 185 -77 421 319 71 8 chr5 191095532 191095735 -11989797 + MIR SINE MIR 40 261 -1 191 208 63 51 chr5 191096720 191096820 -11988712 - MIR SINE MIR -105 103 10 183 250 89 0 chr5 191097134 191097190 -11988342 + MIR SINE MIR 13 73 -189 377 313 119 6 chr5 191097190 191097366 -11988166 + MER91A DNA MER1_type 1 196 0 * 595 294 25 15 chr5 191097366 191097544 -11987988 + MIR SINE MIR 68 247 -15 566 292 52 7 chr5 191098858 191099012 -11986520 - MIR SINE MIR -93 169 9 210 200 22 0 chr5 191099121 191099166 -11986366 - L2 LINE L2 -223 3049 3004 303 271 65 76 chr5 191099254 191099531 -11986001 - L2 LINE L2 -11 3302 3029 266 273 81 20 chr5 191099582 191099681 -11985851 + L2 LINE L2 3168 3272 0 995 255 107 27 chr5 191100334 191100699 -11984833 + L2 LINE L2 2920 3313 0 434 309 83 30 chr5 191101041 191101209 -11984323 + MIR SINE MIR 20 196 -66 21 0 0 0 chr5 191101534 191101555 -11983977 + AT_rich Low_complexity Low_complexity 1 21 0 257 329 18 54 chr5 191101612 191101779 -11983753 + MER117 DNA MER1_type 5 165 -32 2522 148 13 0 chr5 191101879 191102277 -11983255 + MER57A LTR ERV1 1 403 0 327 167 0 0 chr5 191102560 191102608 -11982924 + L2 LINE L2 3221 3268 -4 880 156 30 18 chr5 191102931 191103098 -11982434 - MER20 DNA MER1_type 0 219 51 276 311 76 17 chr5 191103300 191103419 -11982113 + L2 LINE L2 3128 3253 -19 240 330 145 9 chr5 191103428 191103649 -11981883 - L2 LINE L2 -249 3064 2814 325 113 0 19 chr5 191104300 191104353 -11981179 - MER75 DNA T2_type 0 514 463 533 173 19 29 chr5 191104375 191104479 -11981053 - MIR SINE MIR -75 187 85 345 248 203 7 chr5 191104589 191104742 -11980790 + L1ME4a LINE L1 5612 5794 -327 365 260 24 0 chr5 191104839 191104962 -11980570 + L1ME4a LINE L1 5995 6120 -1 2193 122 7 0 chr5 191105756 191106052 -11979480 + AluSx SINE Alu 1 298 -14 208 315 110 78 chr5 191106263 191106689 -11978843 + L2 LINE L2 2825 3264 -8 402 335 90 0 chr5 191107395 191107562 -11977970 - MIR SINE MIR -72 190 9 552 180 25 0 chr5 191107631 191107751 -11977781 - MER33 DNA MER1_type -5 319 197 1482 142 0 41 chr5 191107751 191108018 -11977514 + Tigger2a DNA MER2_type 1 256 -178 1087 103 0 0 chr5 191108018 191108164 -11977368 + AluSp/q SINE Alu 161 306 -7 1077 169 11 0 chr5 191108164 191108347 -11977185 + Tigger2a DNA MER2_type 260 444 0 614 213 28 104 chr5 191108347 191108558 -11976974 - MER33 DNA MER1_type -126 198 4 1753 213 37 3 chr5 191109012 191109365 -11976167 - MLT1A1 LTR MaLR 0 365 1 258 326 11 0 chr5 191109863 191109952 -11975580 + MIR SINE MIR 46 135 -73 338 236 113 19 chr5 191110340 191110446 -11975086 + MER103 DNA DNA 48 163 -3 1494 185 0 0 chr5 191110457 191110700 -11974832 + AluJo SINE Alu 47 289 -23 303 311 91 30 chr5 191110732 191110864 -11974668 - MIR3 SINE MIR -32 176 37 229 301 71 0 chr5 191110960 191111073 -11974459 - L1ME3A LINE L1 -85 6085 5965 341 311 178 6 chr5 191111852 191112032 -11973500 - MIR SINE MIR -12 250 40 1106 286 89 6 chr5 191112227 191112897 -11972635 + L2 LINE L2 2579 3313 0 225 230 40 0 chr5 191113622 191113696 -11971836 + LTR67 LTR ERVL 384 460 -97 200 165 114 51 chr5 191113739 191113818 -11971714 + L2 LINE L2 3147 3230 -42 327 25 0 0 chr5 191113855 191113895 -11971637 + (CA)n Simple_repeat Simple_repeat 1 40 0 396 332 53 16 chr5 191114097 191114284 -11971248 + MIR SINE MIR 57 250 -12 499 250 94 0 chr5 191115009 191115137 -11970395 - MIR SINE MIR -70 192 53 222 323 21 21 chr5 191115575 191115671 -11969861 + L2 LINE L2 2937 3032 -240 181 396 0 10 chr5 191116509 191116605 -11968927 - L3 LINE CR1 -111 1466 1372 770 103 0 0 chr5 191116609 191116716 -11968816 + AluSg/x SINE Alu 192 298 -12 242 298 99 65 chr5 191116773 191116985 -11968547 + L2 LINE L2 2640 2864 -450 201 74 0 0 chr5 191116985 191117012 -11968520 + (TA)n Simple_repeat Simple_repeat 2 28 0 242 298 99 65 chr5 191117012 191117061 -11968471 + L2 LINE L2 2864 2910 -404 1518 231 0 0 chr5 191117082 191117398 -11968134 - L1PB4 LINE L1 -9 6147 5832 239 339 28 0 chr5 191117990 191118099 -11967433 + L2 LINE L2 2923 3034 -238 210 91 0 0 chr5 191119612 191119645 -11965887 + (TC)n Simple_repeat Simple_repeat 2 34 0 262 284 85 70 chr5 191119687 191119888 -11965644 + MER102a DNA MER1_type 108 311 -19 181 203 174 29 chr5 191119947 191120016 -11965516 + MIR SINE MIR 184 262 0 305 230 35 0 chr5 191120341 191120428 -11965104 - MIR SINE MIR -52 210 121 296 259 0 0 chr5 191120555 191120609 -11964923 - L2 LINE L2 -255 3058 3005 2236 122 0 22 chr5 191120775 191121094 -11964438 - AluSx SINE Alu 0 312 1 463 298 154 14 chr5 191121323 191121531 -11964001 - MIR SINE MIR -6 256 20 500 248 81 86 chr5 191121688 191121886 -11963646 + MIR SINE MIR 36 232 -30 2286 88 0 0 chr5 191122280 191122564 -11962968 + AluSx SINE Alu 1 284 -28 243 306 28 0 chr5 191123706 191123778 -11961754 + MER5A DNA MER1_type 116 189 0 547 255 35 7 chr5 191124080 191124225 -11961307 - MER5A DNA MER1_type 0 189 41 217 304 0 0 chr5 191124232 191124288 -11961244 + (TG)n Simple_repeat Simple_repeat 2 57 0 1416 203 100 52 chr5 191124479 191124949 -11960583 - MER39 LTR ERV1 0 707 41 303 298 177 0 chr5 191125038 191125179 -11960353 - MIR SINE MIR -59 203 38 222 254 336 0 chr5 191126304 191126414 -11959118 + L2 LINE L2 2914 3060 -212 1855 182 51 5 chr5 191127544 191127917 -11957615 + MLT1B LTR MaLR 1 390 0 198 287 58 23 chr5 191128010 191128097 -11957435 - MIR SINE MIR -64 144 55 219 276 40 0 chr5 191128330 191128406 -11957126 + MIR SINE MIR 114 192 -70 2341 64 48 3 chr5 191129291 191129586 -11955946 + AluY SINE Alu 1 308 -3 298 356 58 0 chr5 191129979 191130083 -11955449 + MIR3 SINE MIR 77 186 -22 833 272 20 20 chr5 191130507 191130761 -11954771 - MER115 DNA AcHobo -434 259 6 357 308 195 18 chr5 191130991 191131160 -11954372 + L3 LINE CR1 1309 1507 -70 472 228 74 47 chr5 191131586 191131692 -11953840 + MER115 DNA AcHobo 531 644 -49 2067 213 34 39 chr5 191131692 191132199 -11953333 - MLT1D LTR MaLR -1 504 1 472 228 74 47 chr5 191132199 191132241 -11953291 + MER115 DNA AcHobo 644 683 -10 30 27 0 0 chr5 191132285 191132322 -11953210 + AT_rich Low_complexity Low_complexity 1 37 0 203 191 0 21 chr5 191132639 191132686 -11952846 - L2 LINE L2 0 3313 3268 480 265 53 16 chr5 191133069 191133254 -11952278 - MIR SINE MIR -33 229 40 1452 169 77 4 chr5 191134078 191134350 -11951182 - AluJo SINE Alu -20 292 1 1012 279 57 61 chr5 191134927 191135436 -11950096 + LTR67 LTR ERVL 51 557 0 426 310 110 45 chr5 191135470 191135805 -11949727 + L2 LINE L2 2916 3272 0 395 288 110 18 chr5 191136413 191136576 -11948956 - MIR SINE MIR -12 250 73 185 94 31 0 chr5 191136762 191136794 -11948738 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 573 258 39 28 chr5 191137100 191137282 -11948250 + MIR SINE MIR 36 219 -43 1301 139 134 8 chr5 191137470 191137708 -11947824 + LTR22 LTR ERVK 1 268 -241 834 200 29 11 chr5 191137909 191138084 -11947448 + LTR22 LTR ERVK 332 509 0 243 288 51 62 chr5 191138118 191138295 -11947237 + L2 LINE L2 2647 2821 -493 224 333 67 0 chr5 191138555 191138660 -11946872 + L2 LINE L2 3139 3250 -22 2371 165 110 17 chr5 191138734 191139256 -11946276 + MER90 LTR ERV1 1 614 0 423 0 0 0 chr5 191139429 191139476 -11946056 + (TG)n Simple_repeat Simple_repeat 2 48 0 1949 259 38 26 chr5 191141233 191141793 -11943739 + MLT1E LTR MaLR 3 609 -17 1526 207 11 11 chr5 191142607 191142965 -11942567 + L1M4 LINE L1 2320 2677 -3469 292 149 15 15 chr5 191142965 191143032 -11942500 + CT-rich Low_complexity Low_complexity 3 69 0 809 243 12 0 chr5 191143034 191143207 -11942325 - AluJb SINE Alu -1 311 137 2229 219 46 78 chr5 191143209 191143551 -11941981 + L1M4 LINE L1 2681 3033 -3113 5261 54 0 9 chr5 191143551 191144200 -11941332 + L1PA8 LINE L1 5530 6172 0 2229 219 46 78 chr5 191144200 191144411 -11941121 + L1M4 LINE L1 3033 3202 -2944 1903 151 47 3 chr5 191144411 191144710 -11940822 - AluJo SINE Alu 0 312 1 2229 219 46 78 chr5 191144710 191144962 -11940570 + L1M4 LINE L1 3202 3461 -2685 404 267 0 0 chr5 191145076 191145177 -11940355 + L1PB1 LINE L1 97 197 -6666 * 15155 181 22 15 chr5 191145174 191149173 -11936359 + L1PB1 LINE L1 1392 5511 -1356 2387 92 0 0 chr5 191149173 191149467 -11936065 + AluY SINE Alu 1 294 -17 15155 181 22 15 chr5 191149467 191150834 -11934698 + L1PB1 LINE L1 5511 6867 0 4566 194 36 84 chr5 191150827 191152226 -11933306 + L1M4 LINE L1 3438 4770 -1376 * 380 284 84 108 chr5 191153199 191153625 -11931907 - L2 LINE L2 -16 3256 2841 758 332 93 38 chr5 191153727 191154250 -11931282 - L2 LINE L2 -673 2641 2148 1930 189 49 3 chr5 191154250 191154599 -11930933 - MLT1A1 LTR MaLR 0 365 1 758 332 93 38 chr5 191154599 191155051 -11930481 - L2 LINE L2 -1166 2148 1612 253 100 25 0 chr5 191155068 191155108 -11930424 - MADE1 DNA Mariner -39 41 1 2361 110 0 0 chr5 191155340 191155649 -11929883 + AluSx SINE Alu 1 309 -3 26 30 0 0 chr5 191156265 191156298 -11929234 + AT_rich Low_complexity Low_complexity 1 33 0 1628 150 42 28 chr5 191156303 191156589 -11928943 + AluJb SINE Alu 1 290 -22 1667 167 18 11 chr5 191156818 191157124 -11928408 + AluJo SINE Alu 1 308 0 197 281 186 63 chr5 191157131 191157384 -11928148 + L2 LINE L2 1668 1951 -1363 296 266 9 9 chr5 191157405 191157514 -11928018 - L1M4 LINE L1 -1248 4898 4790 238 246 40 121 chr5 191157922 191158121 -11927411 + L2 LINE L2 3004 3186 -86 4323 159 40 26 chr5 191158138 191158909 -11926623 - LTR39 LTR ERV1 0 783 2 251 300 41 39 chr5 191159801 191159960 -11925572 + MIR SINE MIR 22 145 -63 4918 209 4 6 chr5 191160141 191160955 -11924577 - L1PB1 LINE L1 -1 6150 5339 589 249 51 97 chr5 191160955 191161212 -11924320 - MIR SINE MIR -6 256 12 967 223 130 53 chr5 191161677 191162221 -11923311 + MER34C LTR ERV1 4 542 0 582 293 50 14 chr5 191162252 191162474 -11923058 - MIR SINE MIR -12 250 21 2695 118 4 93 chr5 191162474 191162956 -11922576 - LTR12 LTR ERV1 -275 439 1 244 269 83 0 chr5 191163472 191163580 -11921952 + MLT1L LTR MaLR 37 153 -462 1982 151 0 3 chr5 191163682 191163980 -11921552 - AluJb SINE Alu -15 297 1 1184 169 19 5 chr5 191164629 191164842 -11920690 + L1MC1 LINE L1 6107 6322 -11 305 100 20 0 chr5 191165007 191165057 -11920475 + (TA)n Simple_repeat Simple_repeat 1 51 0 2001 128 0 24 chr5 191165131 191165451 -11920081 - AluSg SINE Alu 0 313 1 198 255 223 0 chr5 191165509 191165603 -11919929 - L2 LINE L2 -2 3270 3156 629 63 21 0 chr5 191168278 191168373 -11917159 + L1PA12 LINE L1 6072 6168 0 295 346 44 6 chr5 191168510 191168755 -11916777 + HAL1 LINE L1 1430 1632 -875 1769 277 92 39 chr5 191169787 191171184 -11914348 + L1MCa LINE L1 775 2449 -4158 1013 242 73 16 chr5 191171346 191171782 -11913750 - L1MEc LINE L1 -3526 3118 2683 398 312 0 22 chr5 191171781 191172012 -11913520 - L1MEc LINE L1 -4831 1711 1486 * 2155 136 0 0 chr5 191172036 191172338 -11913194 - AluSx SINE Alu -10 302 1 481 304 55 31 chr5 191172703 191172996 -11912536 - L1MC4 LINE L1 -983 7059 6760 243 0 0 0 chr5 191173027 191173054 -11912478 + (CTG)n Simple_repeat Simple_repeat 1 27 0 410 330 6 6 chr5 191174043 191174225 -11911307 - MIR SINE MIR -27 235 54 252 194 45 15 chr5 191174274 191174341 -11911191 - MER5B DNA MER1_type -73 105 37 211 284 12 41 chr5 191176181 191176350 -11909182 + CT-rich Low_complexity Low_complexity 1 164 0 434 147 9 92 chr5 191176907 191177016 -11908516 - MIR3 SINE MIR -28 180 81 195 300 88 50 chr5 191177018 191177098 -11908434 - MIR3 SINE MIR -43 165 83 211 293 0 0 chr5 191177099 191177157 -11908375 - MIR3 SINE MIR -42 166 109 23 0 0 0 chr5 191178112 191178135 -11907397 + AT_rich Low_complexity Low_complexity 1 23 0 514 296 62 37 chr5 191178343 191178667 -11906865 - L2 LINE L2 -10 3303 2972 212 339 26 0 chr5 191178965 191179080 -11906452 - L2 LINE L2 -695 2619 2502 262 197 151 59 chr5 191179081 191179233 -11906299 - L2 LINE L2 -1090 2224 2059 298 257 37 9 chr5 191179943 191180052 -11905480 + MIR SINE MIR 106 217 -45 294 264 57 25 chr5 191180140 191180299 -11905233 - LTR33 LTR ERVL -4 517 354 227 269 160 0 chr5 191180351 191180526 -11905006 - LTR33 LTR ERVL -275 246 44 220 235 39 0 chr5 191180610 191180661 -11904871 - MIR SINE MIR -71 137 85 338 288 53 30 chr5 191180750 191180882 -11904650 - MIR3 SINE MIR -62 146 12 230 284 18 55 chr5 191181700 191181809 -11903723 - MIR SINE MIR -63 145 41 335 269 59 8 chr5 191181814 191181933 -11903599 + MIR3 SINE MIR 11 135 -73 317 239 196 0 chr5 191181950 191182042 -11903490 - L2 LINE L2 -20 3293 3184 193 182 146 0 chr5 191182058 191182113 -11903419 - MIR SINE MIR -81 181 119 2332 119 3 0 chr5 191183341 191183665 -11901867 - AluSp SINE Alu 0 325 1 226 23 23 68 chr5 191184195 191184239 -11901293 + (CCCCAG)n Simple_repeat Simple_repeat 2 43 0 208 164 0 36 chr5 191184444 191184499 -11901033 + CT-rich Low_complexity Low_complexity 2 54 0 188 211 0 0 chr5 191184526 191184564 -11900968 - MIR SINE MIR -147 115 78 1726 210 32 25 chr5 191185368 191185847 -11899685 - MLT2D LTR ERVL 0 464 1 367 171 206 112 chr5 191185847 191185947 -11899585 - L1MB7 LINE L1 -30 6154 6065 2015 152 14 0 chr5 191185947 191186243 -11899289 - AluJb SINE Alu -12 300 1 367 171 206 112 chr5 191186243 191186312 -11899220 - L1MB7 LINE L1 -119 6065 5969 236 278 54 0 chr5 191188562 191188644 -11896888 + MIR SINE MIR 80 168 -40 1296 247 26 9 chr5 191188771 191189111 -11896421 + L1MD2 LINE L1 6012 6357 -2 195 314 121 10 chr5 191189118 191189325 -11896207 + L2 LINE L2 2748 2977 -337 306 328 91 17 chr5 191189498 191189739 -11895793 - L2 LINE L2 -431 2883 2625 570 253 121 11 chr5 191190217 191190391 -11895141 - MIR SINE MIR -66 196 4 370 216 45 11 chr5 191190643 191190731 -11894801 + L2 LINE L2 3182 3272 0 338 229 146 0 chr5 191190898 191190994 -11894538 - Charlie8 DNA MER1_type -2179 238 129 25 0 0 0 chr5 191191014 191191039 -11894493 + AT_rich Low_complexity Low_complexity 1 25 0 203 231 39 0 chr5 191191664 191191716 -11893816 + CT-rich Low_complexity Low_complexity 3 56 0 309 246 228 0 chr5 191192240 191192354 -11893178 - MIR SINE MIR -6 256 117 392 295 98 31 chr5 191192925 191193149 -11892383 - MIR SINE MIR -1 261 23 203 220 17 34 chr5 191193438 191193497 -11892035 + GA-rich Low_complexity Low_complexity 1 58 0 315 282 0 12 chr5 191193830 191193915 -11891617 + MIR SINE MIR 31 114 -148 741 292 69 13 chr5 191193931 191194164 -11891368 + MIR SINE MIR 16 261 -1 194 178 0 22 chr5 191194355 191194400 -11891132 - L2 LINE L2 -15 3257 3214 554 269 70 5 chr5 191194534 191194735 -11890797 - L2 LINE L2 -339 2975 2762 352 255 10 10 chr5 191194742 191194840 -11890692 + MIR SINE MIR 165 262 0 611 195 0 23 chr5 191195152 191195280 -11890252 + FLAM_A SINE Alu 18 142 0 374 287 0 41 chr5 191195762 191195884 -11889648 + MIR3 SINE MIR 66 182 -26 222 321 47 57 chr5 191196232 191196444 -11889088 + L2 LINE L2 2859 3068 -204 257 230 95 8 chr5 191197557 191197683 -11887849 + (TCTCTG)n Simple_repeat Simple_repeat 2 138 0 203 254 18 0 chr5 191197737 191197792 -11887740 + CT-rich Low_complexity Low_complexity 5 60 0 421 238 38 0 chr5 191198716 191198821 -11886711 - Tigger5 DNA MER2_type 0 2323 2215 227 186 0 0 chr5 191198813 191198856 -11886676 - Tigger5 DNA MER2_type -2268 55 13 * 344 214 0 0 chr5 191198856 191198926 -11886606 - Tigger5 DNA MER2_type 0 2323 2254 334 182 0 0 chr5 191198898 191198953 -11886579 - Tigger5 DNA MER2_type -2268 55 1 * 222 341 77 6 chr5 191199006 191199176 -11886356 - L2 LINE L2 -181 3091 2910 558 298 0 0 chr5 191199263 191199387 -11886145 + L2 LINE L2 3190 3313 0 222 62 0 0 chr5 191200507 191200539 -11884993 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2068 110 11 0 chr5 191200543 191200815 -11884717 - AluSp SINE Alu -37 276 2 198 270 10 90 chr5 191201401 191201501 -11884031 + MER5A DNA MER1_type 68 159 -30 285 337 30 30 chr5 191201712 191201881 -11883651 - MIR SINE MIR -74 188 20 321 286 45 18 chr5 191202436 191202548 -11882984 - MIR SINE MIR 0 262 148 1799 113 31 100 chr5 191202910 191203108 -11882424 - AluSx SINE Alu -15 297 128 234 116 0 0 chr5 191203108 191203151 -11882381 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1799 113 31 100 chr5 191203151 191203271 -11882261 - AluSx SINE Alu -184 128 1 440 298 48 0 chr5 191203448 191203572 -11881960 + MIR SINE MIR 83 212 -50 451 252 28 56 chr5 191203742 191203885 -11881647 - MER117 DNA MER1_type -50 147 9 561 220 110 12 chr5 191204335 191204508 -11881024 - MLT1J2 LTR MaLR -8 442 253 817 252 14 29 chr5 191206968 191207178 -11878354 + MIR SINE MIR 28 234 -28 261 257 43 0 chr5 191207289 191207359 -11878173 - MIR3 SINE MIR -50 158 86 758 234 97 9 chr5 191207793 191208019 -11877513 + MIR SINE MIR 7 252 -10 367 269 135 26 chr5 191208684 191208877 -11876655 + MIR SINE MIR 45 258 -4 2384 99 0 0 chr5 191209296 191209599 -11875933 - AluSx SINE Alu -9 303 1 259 323 38 30 chr5 191209938 191210071 -11875461 + MIR3 SINE MIR 1 134 -74 1434 232 27 25 chr5 191211591 191211957 -11873575 - MLT1K LTR MaLR -2 586 220 417 279 22 73 chr5 191212264 191212443 -11873089 - MIR SINE MIR -92 170 1 324 196 82 72 chr5 191212676 191212773 -11872759 + L2 LINE L2 3209 3306 -7 431 340 28 0 chr5 191212888 191213029 -11872503 - MIR SINE MIR -31 231 87 1072 300 89 20 chr5 191213165 191213668 -11871864 + LTR67 LTR ERVL 19 556 -1 322 198 10 73 chr5 191213888 191213984 -11871548 - MER5A DNA MER1_type -83 106 17 214 331 115 8 chr5 191214547 191214677 -11870855 + L2 LINE L2 2916 3059 -213 234 91 0 0 chr5 191215421 191215454 -11870078 + (TCC)n Simple_repeat Simple_repeat 2 34 0 296 291 35 0 chr5 191215952 191216038 -11869494 - MIR SINE MIR -88 174 86 398 294 32 8 chr5 191216158 191216284 -11869248 + MIR SINE MIR 64 192 -70 495 280 26 14 chr5 191216608 191216905 -11868627 - MER93b LTR ERV1 0 373 41 581 229 30 0 chr5 191216905 191217036 -11868496 + AluJb SINE Alu 166 300 -12 462 114 0 0 chr5 191217037 191217107 -11868425 + (GGAGAA)n Simple_repeat Simple_repeat 1 70 0 1675 162 0 15 chr5 191217128 191217393 -11868139 - AluJo SINE Alu -46 266 6 481 238 35 23 chr5 191217655 191217827 -11867705 - AluY SINE Alu -136 175 2 256 311 106 8 chr5 191218091 191218223 -11867309 + L3b LINE CR1 1319 1463 -120 334 326 54 105 chr5 191218485 191218779 -11866753 + L2 LINE L2 2986 3264 -8 538 299 17 11 chr5 191219589 191219763 -11865769 + MIR SINE MIR 12 186 -76 730 271 106 5 chr5 191221152 191221359 -11864173 + MIR SINE MIR 21 248 -14 180 255 53 96 chr5 191221424 191221518 -11864014 + L3b LINE CR1 1396 1485 -98 285 75 0 0 chr5 191221950 191221990 -11863542 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 528 234 88 18 chr5 191222005 191222176 -11863356 - MIR SINE MIR -2 260 78 316 277 80 27 chr5 191223003 191223181 -11862351 - MIR SINE MIR -38 224 39 349 302 16 16 chr5 191223349 191223475 -11862057 + L2 LINE L2 3175 3300 -13 186 43 0 0 chr5 191223475 191223498 -11862034 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 209 307 150 24 chr5 191223520 191223647 -11861885 - MIR SINE MIR 0 262 120 267 296 57 70 chr5 191224160 191224390 -11861142 - MIR SINE MIR -29 233 7 292 297 0 22 chr5 191224460 191224551 -11860981 + GA-rich Low_complexity Low_complexity 4 92 0 1485 215 51 13 chr5 191224747 191225119 -11860413 - MLT1B LTR MaLR -1 389 4 187 281 157 34 chr5 191225544 191225633 -11859899 + MIR SINE MIR 151 250 -12 486 282 47 81 chr5 191225868 191226266 -11859266 - L2 LINE L2 -114 3158 2760 2416 83 0 13 chr5 191227891 191228205 -11857327 + AluSx SINE Alu 1 310 -2 635 74 0 11 chr5 191228465 191228560 -11856972 + (CA)n Simple_repeat Simple_repeat 1 94 0 336 216 10 29 chr5 191228713 191228815 -11856717 + C-rich Low_complexity Low_complexity 3 102 0 361 314 8 24 chr5 191230977 191231101 -11854431 + MIR SINE MIR 20 141 -121 212 313 24 12 chr5 191231418 191231501 -11854031 - MIR SINE MIR -7 255 172 317 325 8 17 chr5 191231778 191231898 -11853634 + MIR3 SINE MIR 89 207 -1 562 238 131 42 chr5 191231990 191232204 -11853328 + MIR SINE MIR 30 262 0 260 263 18 0 chr5 191233346 191233403 -11852129 + MIR SINE MIR 88 145 -63 201 355 103 9 chr5 191233701 191233808 -11851724 + L2 LINE L2 3182 3298 -15 297 250 0 0 chr5 191234339 191234479 -11851053 + (TGAA)n Simple_repeat Simple_repeat 4 143 0 352 213 111 9 chr5 191234853 191234961 -11850571 + L2 LINE L2 2949 3067 -205 294 216 27 126 chr5 191235665 191235714 -11849818 + MIR SINE MIR 103 137 -125 2157 119 0 0 chr5 191235714 191236016 -11849516 + AluSg SINE Alu 1 302 -8 294 216 27 126 chr5 191236016 191236077 -11849455 + MIR SINE MIR 137 202 -60 539 293 98 10 chr5 191236419 191236624 -11848908 - MIR SINE MIR -33 229 7 700 278 51 39 chr5 191237215 191237470 -11848062 + MIR SINE MIR 4 261 -1 539 244 156 25 chr5 191237484 191237552 -11847980 + MER5A DNA MER1_type 9 67 -122 2423 47 0 3 chr5 191237552 191237850 -11847682 + AluY SINE Alu 1 297 -14 539 244 156 25 chr5 191237850 191237941 -11847591 + MER5A DNA MER1_type 67 189 0 414 272 75 27 chr5 191237980 191238127 -11847405 - MIR3 SINE MIR -4 204 51 748 321 37 4 chr5 191238237 191238480 -11847052 - L3 LINE CR1 -742 835 585 209 349 36 0 chr5 191238691 191238774 -11846758 - MIR SINE MIR -71 191 106 533 277 48 11 chr5 191289002 191289190 -11796342 + MIR SINE MIR 5 199 -63 2536 62 3 7 chr5 191289194 191289499 -11796033 - AluY SINE Alu -7 304 1 555 260 186 15 chr5 191289608 191289877 -11795655 - L2 LINE L2 -4 3309 2995 965 71 0 14 chr5 191289906 191290046 -11795486 + (GTGTG)n Simple_repeat Simple_repeat 5 142 0 241 277 97 80 chr5 191290103 191290341 -11795191 + MIR SINE MIR 21 262 0 477 229 90 19 chr5 191290923 191291222 -11794310 - MLT1J2 LTR MaLR 0 450 96 4587 141 19 40 chr5 191291643 191292527 -11793005 - L1MB3 LINE L1 -1 6182 5317 377 324 21 1 chr5 191292543 191292686 -11792846 - MIR SINE MIR -64 144 42 278 318 53 18 chr5 191292910 191293080 -11792452 + MIR SINE MIR 85 260 -2 235 265 86 53 chr5 191294619 191294724 -11790808 + MIR SINE MIR 4 117 -145 2294 112 0 0 chr5 191294724 191295029 -11790503 - AluSx SINE Alu -7 305 1 235 265 86 53 chr5 191295029 191295074 -11790458 + MIR SINE MIR 117 159 -103 473 277 85 17 chr5 191295861 191296038 -11789494 - MIR SINE MIR -57 205 17 483 294 122 0 chr5 191297172 191297352 -11788180 - MIR SINE MIR -59 203 2 201 39 0 0 chr5 191297999 191298025 -11787507 + (TA)n Simple_repeat Simple_repeat 2 27 0 203 139 23 0 chr5 191298025 191298058 -11787474 + GA-rich Low_complexity Low_complexity 8 44 0 197 255 11 128 chr5 191298618 191298712 -11786820 + MIR SINE MIR 28 110 -152 489 34 0 0 chr5 191299084 191299143 -11786389 + (TG)n Simple_repeat Simple_repeat 2 60 0 218 198 99 49 chr5 191299387 191299468 -11786064 + MIR SINE MIR 177 261 -1 835 262 62 13 chr5 191300185 191300410 -11785122 - MIR SINE MIR -11 251 16 371 388 8 16 chr5 191300437 191300687 -11784845 + L2 LINE L2 2825 3072 -200 357 280 16 29 chr5 191300913 191301122 -11784410 + MIR SINE MIR 2 252 -10 502 211 49 16 chr5 191301136 191301259 -11784273 + MIR SINE MIR 18 144 -118 270 327 29 34 chr5 191303624 191303829 -11781703 - L2 LINE L2 -22 3250 3047 190 331 83 44 chr5 191303980 191304161 -11781371 - L2 LINE L2 -492 2822 2635 300 191 147 0 chr5 191304429 191304497 -11781035 - MLT1K LTR MaLR -8 580 503 189 344 180 0 chr5 191305230 191305358 -11780174 + MIR SINE MIR 3 153 -109 3600 158 33 34 chr5 191305601 191305963 -11779569 - L1MB5 LINE L1 0 6174 5813 2351 114 0 0 chr5 191305963 191306271 -11779261 - AluSx SINE Alu -4 308 1 3600 158 33 34 chr5 191306271 191306636 -11778896 - L1MB5 LINE L1 -361 5813 5448 510 319 75 14 chr5 191307350 191307563 -11777969 + MIR SINE MIR 20 245 -17 302 272 143 20 chr5 191307650 191307797 -11777735 - MIR SINE MIR -76 186 22 557 195 0 18 chr5 191308142 191308255 -11777277 - MLT1C LTR MaLR 0 467 357 407 256 68 0 chr5 191308562 191308679 -11776853 + MIR SINE MIR 76 200 -62 2235 84 39 0 chr5 191308686 191308972 -11776560 + AluSx SINE Alu 1 297 -15 404 264 108 20 chr5 191309480 191309628 -11775904 - MIR SINE MIR 0 262 102 1740 146 10 63 chr5 191309755 191310079 -11775453 + AluJo SINE Alu 1 308 0 589 216 161 0 chr5 191310271 191310433 -11775099 + MER5A DNA MER1_type 1 188 -1 744 312 16 24 chr5 191310722 191310969 -11774563 + MIR SINE MIR 8 252 -10 495 282 119 5 chr5 191311086 191311288 -11774244 - MIR SINE MIR -8 254 30 223 339 74 0 chr5 191311405 191311526 -11774006 - MIR3 SINE MIR -14 194 65 492 258 24 8 chr5 191312091 191312215 -11773317 - L2 LINE L2 -1 3312 3187 237 277 30 84 chr5 191313111 191313277 -11772255 + L2 LINE L2 2596 2752 -562 663 285 20 10 chr5 191313549 191313749 -11771783 - MIR SINE MIR -10 252 51 206 294 12 35 chr5 191313750 191313835 -11771697 + GA-rich Low_complexity Low_complexity 5 87 0 379 191 60 0 chr5 191313839 191313923 -11771609 + MLT1I LTR MaLR 319 407 -2 417 180 153 95 chr5 191314626 191314815 -11770717 - MER106B DNA MER1_type -7 1052 30 2327 113 3 0 chr5 191315128 191315438 -11770094 + AluSx SINE Alu 1 311 -1 517 241 68 101 chr5 191315860 191316097 -11769435 + MIR SINE MIR 20 248 -14 325 273 90 61 chr5 191316268 191316447 -11769085 + MIR SINE MIR 34 217 -45 375 255 21 43 chr5 191316468 191316609 -11768923 - L2 LINE L2 0 3313 3176 620 318 33 73 chr5 191316911 191317310 -11768222 + L2 LINE L2 2875 3257 -15 432 198 28 9 chr5 191317841 191317947 -11767585 - MER103 DNA DNA -48 118 11 852 156 6 12 chr5 191318593 191318766 -11766766 + GA-rich Low_complexity Low_complexity 2 173 0 308 304 35 58 chr5 191318816 191318987 -11766545 + MIR3 SINE MIR 32 198 -10 282 283 152 0 chr5 191319179 191319278 -11766254 + L2 LINE L2 3200 3313 0 332 278 46 26 chr5 191319453 191319604 -11765928 + MIR SINE MIR 28 181 -81 204 315 70 21 chr5 191320199 191320342 -11765190 + MIR SINE MIR 66 215 -47 517 325 96 36 chr5 191320413 191320890 -11764642 + MLT1K LTR MaLR 80 585 -3 339 359 64 14 chr5 191321242 191321462 -11764070 + MIR SINE MIR 20 250 -12 1889 168 23 0 chr5 191321696 191322000 -11763532 - AluJo SINE Alu -1 311 1 400 284 128 54 chr5 191322139 191322343 -11763189 + MIR3 SINE MIR 34 252 -10 1049 259 69 92 chr5 191322348 191322531 -11763001 + MLT1C LTR MaLR 1 187 -280 2458 93 0 0 chr5 191322531 191322831 -11762701 + AluSq SINE Alu 1 300 -13 1049 259 69 92 chr5 191322831 191323052 -11762480 + MLT1C LTR MaLR 187 412 -55 1951 83 37 69 chr5 191323052 191323400 -11762132 - MER1B DNA MER1_type 0 337 1 2466 76 7 0 chr5 191323402 191323703 -11761829 - AluSp SINE Alu -10 303 1 1049 259 69 92 chr5 191323703 191323772 -11761760 + MLT1C LTR MaLR 413 467 0 466 244 0 87 chr5 191324400 191324572 -11760960 - L2 LINE L2 -1 3312 3156 507 123 9 28 chr5 191324871 191324977 -11760555 + (GGGGA)n Simple_repeat Simple_repeat 3 106 0 326 287 222 5 chr5 191326112 191326328 -11759204 - L2 LINE L2 -337 2977 2715 388 289 62 39 chr5 191326357 191326565 -11758967 - MIR SINE MIR -30 232 20 304 205 7 152 chr5 191326992 191327143 -11758389 + LTR67 LTR ERVL 24 152 -405 314 326 74 23 chr5 191328505 191328680 -11756852 - MIR SINE MIR -54 208 25 186 43 0 0 chr5 191330450 191330473 -11755059 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 180 262 0 0 chr5 191331019 191331061 -11754471 - MIR SINE MIR -112 150 109 256 277 28 99 chr5 191331167 191331308 -11754224 + MIR SINE MIR 16 146 -62 342 302 31 8 chr5 191331417 191331546 -11753986 + MIR SINE MIR 122 253 -9 189 247 49 37 chr5 191332724 191332805 -11752727 + MIR3 SINE MIR 81 162 -46 514 253 167 10 chr5 191332912 191333110 -11752422 + MIR SINE MIR 13 241 -21 365 240 85 0 chr5 191333568 191333697 -11751835 - L2 LINE L2 -251 3062 2923 1750 283 72 40 chr5 191333908 191334471 -11751061 - L2 LINE L2 -438 2876 2276 534 201 19 129 chr5 191334471 191334680 -11750852 - MER5A DNA MER1_type -1 188 3 1750 283 72 40 chr5 191334680 191334962 -11750570 - L2 LINE L2 -1038 2276 2004 454 222 27 135 chr5 191335076 191335211 -11750321 + MIR3 SINE MIR 23 171 -37 195 0 39 0 chr5 191335211 191335237 -11750295 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2030 141 0 0 chr5 191335237 191335521 -11750011 - AluSx SINE Alu -28 284 1 454 222 27 135 chr5 191335521 191335569 -11749963 + MIR3 SINE MIR 169 187 -21 232 203 94 16 chr5 191335582 191335646 -11749886 + L2 LINE L2 3020 3088 -225 184 323 75 0 chr5 191335799 191335892 -11749640 + L2 LINE L2 3113 3212 -60 1223 277 120 28 chr5 191335907 191336514 -11749018 - L2 LINE L2 -525 2789 2127 190 305 74 0 chr5 191336812 191336907 -11748625 - MIR SINE MIR -113 149 48 467 299 106 19 chr5 191336952 191337159 -11748373 - MIR SINE MIR -10 252 28 521 253 190 37 chr5 191337527 191338117 -11747415 + L2 LINE L2 2624 3313 0 401 278 121 15 chr5 191338504 191338702 -11746830 - MIR SINE MIR -34 228 10 378 259 105 21 chr5 191339641 191339784 -11745748 + MIR SINE MIR 22 176 -86 547 247 27 47 chr5 191340065 191340215 -11745317 - MLT1J LTR MaLR -69 442 296 245 306 27 27 chr5 191340267 191340378 -11745154 - L2 LINE L2 -754 2560 2450 289 214 14 14 chr5 191340467 191340537 -11744995 - MER103 DNA DNA -52 114 45 385 285 56 5 chr5 191343014 191343138 -11742394 - MIR3 SINE MIR -62 146 58 1767 193 117 24 chr5 191343138 191343600 -11741932 + MLT1D LTR MaLR 1 505 0 385 285 56 5 chr5 191343600 191343650 -11741882 - MIR3 SINE MIR -150 58 12 390 266 28 37 chr5 191344375 191344484 -11741048 - L2 LINE L2 -3 3310 3203 2026 259 30 8 chr5 191345480 191346136 -11739396 + L1MC1 LINE L1 2297 2967 -3179 * 8369 202 18 18 chr5 191346110 191349129 -11736403 + L1MC1 LINE L1 3310 6327 -6 729 300 48 24 chr5 191349137 191349474 -11736058 + L1ME LINE L1 5428 5772 -390 654 256 13 13 chr5 191349596 191349752 -11735780 + MER91A DNA MER1_type 1 156 -40 210 352 0 0 chr5 191349845 191349899 -11735633 + MER91A DNA MER1_type 143 196 0 534 211 24 30 chr5 191350336 191350354 -11735178 - L1MA10 LINE L1 0 6334 6317 2028 217 55 50 chr5 191350354 191350977 -11734555 - L1ME1 LINE L1 -7 6159 5534 576 194 58 13 chr5 191350982 191351137 -11734395 + L1M4 LINE L1 5131 5292 -854 306 269 153 41 chr5 191351215 191351457 -11734075 + L3 LINE CR1 1199 1467 -110 1724 156 7 3 chr5 191352404 191352692 -11732840 + AluJb SINE Alu 12 300 -12 273 119 0 0 chr5 191352706 191352748 -11732784 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 432 267 52 47 chr5 191352923 191353095 -11732437 - MIR SINE MIR -7 255 83 221 150 25 0 chr5 191353118 191353158 -11732374 - L2 LINE L2 -78 3235 3195 243 0 0 0 chr5 191353587 191353614 -11731918 + (CAT)n Simple_repeat Simple_repeat 3 29 0 247 260 78 101 chr5 191353721 191353979 -11731553 - MLT1K LTR MaLR -14 574 323 245 286 28 99 chr5 191354195 191354408 -11731124 + L2 LINE L2 2897 3094 -178 360 264 57 57 chr5 191354461 191354601 -11730931 - L2 LINE L2 -21 3292 3153 479 250 58 0 chr5 191356521 191356641 -11728891 - LTR33 LTR ERVL -53 468 342 393 277 131 8 chr5 191356767 191356897 -11728635 - LTR33 LTR ERVL -375 146 1 2252 112 0 0 chr5 191357175 191357487 -11728045 - AluSx SINE Alu 0 312 1 292 232 128 67 chr5 191357542 191357706 -11727826 + MIR3 SINE MIR 13 186 -22 261 262 152 48 chr5 191358116 191358326 -11727206 - L2 LINE L2 -155 3117 2886 1934 149 162 8 chr5 191358351 191358721 -11726811 - MSTC LTR MaLR 0 428 2 203 412 69 0 chr5 191358801 191358932 -11726600 + L2 LINE L2 3127 3266 -6 362 314 82 52 chr5 191359157 191359483 -11726049 - MER113 DNA MER1_type? -6 515 180 265 178 168 47 chr5 191359483 191359590 -11725942 - LTR33 LTR ERVL 0 521 402 284 322 35 14 chr5 191359612 191359755 -11725777 - L1ME4a LINE L1 -11 6110 5965 276 146 0 0 chr5 191359982 191360030 -11725502 + MADE1 DNA Mariner 1 48 -32 23 0 0 0 chr5 191360555 191360578 -11724954 + AT_rich Low_complexity Low_complexity 1 23 0 530 281 79 56 chr5 191361072 191361414 -11724118 - L2 LINE L2 -739 2575 2226 329 322 110 0 chr5 191361536 191361654 -11723878 + MIR3 SINE MIR 67 197 -11 200 254 49 90 chr5 191361936 191362058 -11723474 - L2 LINE L2 0 3272 3156 331 331 112 12 chr5 191363320 191363489 -11722043 - MIR SINE MIR -74 188 3 391 246 107 33 chr5 191363805 191364077 -11721455 + L2 LINE L2 2377 2668 -646 564 282 104 60 chr5 191364291 191364677 -11720855 + L2 LINE L2 2809 3211 -61 860 122 0 0 chr5 191364679 191364802 -11720730 - AluSq/x SINE Alu -189 123 1 759 255 137 11 chr5 191364808 191365079 -11720453 - L2 LINE L2 0 3313 3009 3282 157 153 108 chr5 191365652 191366236 -11719296 - L1MC3 LINE L1 -1 7784 7077 230 254 0 16 chr5 191366236 191366299 -11719233 - MLT1F1 LTR MaLR -453 114 53 3282 157 153 108 chr5 191366299 191366648 -11718884 - L1MC3 LINE L1 -708 7077 6745 426 253 32 0 chr5 191366699 191366853 -11718679 - L1ME4a LINE L1 0 6121 5963 2084 109 10 3 chr5 191367223 191367525 -11718007 + AluSp SINE Alu 1 304 -9 769 253 99 21 chr5 191367784 191368017 -11717515 + MIR SINE MIR 2 252 -10 454 156 33 22 chr5 191368043 191368133 -11717399 - MLT1K LTR MaLR -3 585 495 269 266 16 0 chr5 191368148 191368212 -11717320 - MLT1K LTR MaLR -339 249 185 201 260 202 0 chr5 191368565 191368669 -11716863 + MIR SINE MIR 29 153 -55 290 266 166 60 chr5 191369150 191369349 -11716183 + L2 LINE L2 3027 3246 -26 227 31 31 0 chr5 191369354 191369386 -11716146 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 419 271 16 25 chr5 191369451 191369573 -11715959 + MIR SINE MIR 84 204 -58 399 174 0 0 chr5 191370405 191370491 -11715041 + (TGGA)n Simple_repeat Simple_repeat 1 86 0 2154 99 3 13 chr5 191370802 191371116 -11714416 + AluSx SINE Alu 1 311 -1 847 279 90 81 chr5 191371284 191371918 -11713614 + L2 LINE L2 2651 3300 -13 207 100 0 0 chr5 191371918 191371948 -11713584 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 449 327 72 58 chr5 191372017 191372448 -11713084 - L2 LINE L2 -27 3245 2809 412 250 79 29 chr5 191373435 191373575 -11711957 + MIR SINE MIR 17 163 -99 492 321 12 12 chr5 191373618 191373780 -11711752 - MIR SINE MIR -83 179 18 207 284 0 30 chr5 191373971 191374038 -11711494 + MIR SINE MIR 79 143 -65 350 289 60 27 chr5 191374044 191374193 -11711339 + L1ME LINE L1 5501 5654 -516 505 198 10 0 chr5 191374193 191374294 -11711238 - MER20 DNA MER1_type 0 219 118 614 78 0 11 chr5 191374320 191374410 -11711122 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 1482 179 21 11 chr5 191375210 191375495 -11710037 + AluJo SINE Alu 1 288 -24 33 0 0 0 chr5 191375495 191375528 -11710004 + AT_rich Low_complexity Low_complexity 1 33 0 2035 112 0 10 chr5 191375528 191375824 -11709708 + AluSc SINE Alu 1 293 -16 267 262 24 24 chr5 191375941 191376025 -11709507 + MIR SINE MIR 100 183 -79 450 0 0 0 chr5 191376243 191376364 -11709168 + (GGAAA)n Simple_repeat Simple_repeat 1 171 0 450 0 0 0 chr5 191376364 191376414 -11709118 + (GGAAA)n Simple_repeat Simple_repeat 4 53 0 782 232 42 11 chr5 191377347 191377537 -11707995 - MIR SINE MIR -64 198 3 624 277 60 16 chr5 191377539 191377723 -11707809 - MIR SINE MIR -23 239 48 368 268 85 26 chr5 191379357 191379510 -11706022 + MER63 DNA MER1_type 675 1060 0 324 0 0 0 chr5 191379817 191379853 -11705679 + (TG)n Simple_repeat Simple_repeat 2 37 0 638 276 97 14 chr5 191379918 191380267 -11705265 - L1MC4a LINE L1 -352 5818 5479 219 208 19 0 chr5 191380343 191380396 -11705136 - MIR SINE MIR -123 139 86 239 197 0 45 chr5 191381074 191381140 -11704392 + GA-rich Low_complexity Low_complexity 3 65 0 186 293 0 49 chr5 191381778 191381860 -11703672 + MIR SINE MIR 179 256 -6 945 98 8 0 chr5 191382987 191383119 -11702413 - AluSq/x SINE Alu -180 133 1 349 268 19 124 chr5 191383365 191383574 -11701958 - MIR SINE MIR -6 256 70 1690 156 40 13 chr5 191383901 191384080 -11701452 - AluSx SINE Alu -3 309 117 393 22 0 0 chr5 191384080 191384126 -11701406 + (TG)n Simple_repeat Simple_repeat 2 47 0 1690 156 40 13 chr5 191384126 191384247 -11701285 - AluSx SINE Alu -195 117 1 427 333 32 0 chr5 191384293 191384416 -11701116 + MIR3 SINE MIR 37 163 -45 886 234 79 22 chr5 191384419 191384646 -11700886 - MLT1C LTR MaLR 0 467 228 244 220 20 0 chr5 191384641 191384691 -11700841 + MLT1C LTR MaLR 417 467 0 * 260 263 20 66 chr5 191385073 191385225 -11700307 - HAL1b LINE L1 -429 919 775 2051 108 7 0 chr5 191385690 191385977 -11699555 - AluSx SINE Alu -23 289 1 22 0 0 0 chr5 191386341 191386363 -11699169 + AT_rich Low_complexity Low_complexity 1 22 0 258 306 7 28 chr5 191386428 191386572 -11698960 + GA-rich Low_complexity Low_complexity 2 142 0 2211 110 0 23 chr5 191387376 191387677 -11697855 - AluSg SINE Alu -16 294 1 319 267 158 0 chr5 191387905 191388070 -11697462 + MIR SINE MIR 51 241 -21 633 210 103 71 chr5 191388220 191388444 -11697088 - MIR SINE MIR -11 251 21 207 232 0 0 chr5 191389142 191389198 -11696334 + GA-rich Low_complexity Low_complexity 4 59 0 258 136 0 0 chr5 191389359 191389403 -11696129 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 615 269 24 0 chr5 191389537 191389704 -11695828 - MIR SINE MIR -29 233 63 283 308 50 65 chr5 191389737 191389997 -11695535 - L2 LINE L2 -188 3084 2829 212 330 73 0 chr5 191390067 191390176 -11695356 + L2 LINE L2 2688 2804 -510 382 243 54 36 chr5 191390222 191390333 -11695199 + L2 LINE L2 3159 3271 -1 528 313 41 10 chr5 191391607 191391802 -11693730 + MIR SINE MIR 47 247 -15 500 259 62 21 chr5 191392727 191392920 -11692612 + MIR SINE MIR 48 248 -14 22 0 0 0 chr5 191393123 191393145 -11692387 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 191394380 191394402 -11691130 + AT_rich Low_complexity Low_complexity 1 22 0 249 286 114 59 chr5 191395251 191395506 -11690026 + L2 LINE L2 2386 2654 -660 451 239 54 55 chr5 191395553 191395844 -11689688 - L1ME3A LINE L1 -100 6070 5712 2383 88 3 0 chr5 191395929 191396223 -11689309 + AluSc SINE Alu 1 295 -14 264 321 172 23 chr5 191396223 191396572 -11688960 + L2 LINE L2 2910 3310 -3 200 303 66 0 chr5 191396756 191396832 -11688700 - MER91C DNA MER1_type -29 111 31 282 95 0 0 chr5 191397221 191397263 -11688269 + (TCC)n Simple_repeat Simple_repeat 2 43 0 385 339 36 23 chr5 191397325 191397629 -11687903 + L2 LINE L2 3004 3311 -2 204 261 87 11 chr5 191397733 191397825 -11687707 - MIR SINE MIR -135 127 29 476 294 25 6 chr5 191398382 191398545 -11686987 - MIR SINE MIR -72 190 25 424 327 50 15 chr5 191398547 191398746 -11686786 + MIR SINE MIR 6 211 -51 266 250 38 0 chr5 191398993 191399073 -11686459 - MIR SINE MIR -60 202 120 362 257 44 0 chr5 191399310 191399423 -11686109 - L1ME4a LINE L1 -13 6108 5991 198 0 0 0 chr5 191399747 191399769 -11685763 + (A)n Simple_repeat Simple_repeat 1 22 0 245 295 43 43 chr5 191400247 191400454 -11685078 + L2 LINE L2 2842 3048 -265 1162 178 10 19 chr5 191400559 191400767 -11684765 + AluJb SINE Alu 85 290 -22 189 286 0 0 chr5 191400780 191400829 -11684703 + L2 LINE L2 3134 3182 -90 202 265 15 15 chr5 191400833 191400901 -11684631 + MIR SINE MIR 4 71 -191 488 280 23 0 chr5 191400962 191401094 -11684438 - MLT1I LTR MaLR -274 135 1 207 334 83 3 chr5 191401902 191402094 -11683438 - MIR SINE MIR -19 243 28 511 41 0 14 chr5 191402182 191402255 -11683277 + L1PB1 LINE L1 6078 6149 -2 530 170 0 0 chr5 191402341 191402435 -11683097 + L2 LINE L2 3220 3313 0 265 302 28 9 chr5 191402473 191402579 -11682953 + MIR3 SINE MIR 47 154 -54 280 206 16 0 chr5 191403116 191403179 -11682353 + MIR SINE MIR 108 171 -91 446 215 131 0 chr5 191403554 191403661 -11681871 - Charlie8 DNA MER1_type -2211 206 86 785 165 39 0 chr5 191403686 191403813 -11681719 + AluJo SINE Alu 5 136 -176 280 206 16 0 chr5 191404587 191404650 -11680882 + MIR SINE MIR 108 171 -91 517 270 101 5 chr5 191406514 191406703 -11678829 - MER63A DNA MER1_type 0 210 4 180 0 0 0 chr5 191407349 191407369 -11678163 + (A)n Simple_repeat Simple_repeat 1 20 0 2171 243 63 35 chr5 191408668 191408812 -11676720 - L1MEd LINE L1 -3139 3076 2938 1725 182 27 10 chr5 191408812 191409108 -11676424 + AluJb SINE Alu 1 301 -11 2171 243 63 35 chr5 191409108 191409802 -11675730 - L1MEd LINE L1 -3277 2938 2214 449 296 25 59 chr5 191409783 191410056 -11675476 - L1MEd LINE L1 -4831 1343 1175 * 2245 117 3 0 chr5 191410056 191410355 -11675177 - AluSx SINE Alu -10 302 3 449 296 25 59 chr5 191410355 191410710 -11674822 - L1MEd LINE L1 -4999 1175 810 196 241 35 0 chr5 191410990 191411048 -11674484 + L2 LINE L2 3000 3059 -213 515 289 68 71 chr5 191411171 191411482 -11674050 + MER102b DNA MER1_type 32 341 0 1644 162 41 3 chr5 191411631 191411921 -11673611 + L1MC2 LINE L1 6031 6331 -13 214 241 0 35 chr5 191412505 191412563 -11672969 + L2 LINE L2 3192 3247 -66 826 308 31 19 chr5 191413591 191413916 -11671616 - MER102b DNA MER1_type -10 331 3 2248 114 0 7 chr5 191413930 191414229 -11671303 + AluSq SINE Alu 1 297 -16 618 179 19 0 chr5 191414695 191414801 -11670731 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4205 130 29 38 chr5 191414791 191415551 -11669981 + Tigger3(Golem) DNA MER2_type 2277 3029 0 211 383 39 31 chr5 191415640 191415768 -11669764 - L3 LINE CR1 -32 1545 1417 269 247 0 147 chr5 191416423 191416573 -11668959 - MER112 DNA MER1_type -100 160 33 447 184 88 16 chr5 191420151 191420276 -11665256 - MIR SINE MIR -82 180 47 355 289 99 0 chr5 191420818 191420939 -11664593 - MIR SINE MIR -81 181 49 376 277 122 19 chr5 191421480 191421693 -11663839 - MIR SINE MIR -6 256 22 700 236 4 93 chr5 191422335 191422593 -11662939 - MIR SINE MIR -24 238 4 334 324 73 11 chr5 191423921 191424203 -11661329 - L2 LINE L2 -195 3118 2802 1538 252 66 13 chr5 191424240 191424712 -11660820 + L1ME2 LINE L1 3384 3880 -2266 * 3742 212 72 46 chr5 191424698 191425315 -11660217 + L1ME2 LINE L1 4156 4755 -1409 4789 87 35 1 chr5 191425315 191426004 -11659528 + L1MA2 LINE L1 5593 6304 0 3742 212 72 46 chr5 191426004 191426808 -11658724 + L1ME2 LINE L1 4755 5642 -522 1897 161 0 34 chr5 191426808 191427130 -11658402 + AluSx SINE Alu 1 311 -1 3742 212 72 46 chr5 191427130 191427659 -11657873 + L1ME2 LINE L1 5642 6155 -9 430 284 112 79 chr5 191427768 191427858 -11657674 + L1ME LINE L1 3687 3773 -2373 1770 163 0 13 chr5 191427858 191428159 -11657373 + AluJo SINE Alu 14 310 -2 430 284 112 79 chr5 191428159 191429171 -11656361 + L1ME LINE L1 3773 4825 -1321 204 426 57 0 chr5 191429557 191429679 -11655853 + L2 LINE L2 3143 3271 -1 486 314 117 21 chr5 191429719 191430231 -11655301 + L1ME LINE L1 5264 5824 -297 32 67 0 0 chr5 191430237 191430297 -11655235 + AT_rich Low_complexity Low_complexity 1 60 0 2796 209 167 21 chr5 191430816 191431577 -11653955 + L1MC4 LINE L1 6696 7567 -475 1014 99 7 0 chr5 191431679 191431820 -11653712 + AluJb SINE Alu 171 312 0 313 213 138 0 chr5 191431820 191431914 -11653618 + L1MD3 LINE L1 7683 7789 -206 657 24 0 0 chr5 191431914 191431999 -11653533 + AluYa5/8 SINE Alu 226 310 0 975 193 5 15 chr5 191431999 191432201 -11653331 + L1MD3 LINE L1 7786 7985 -10 246 326 11 22 chr5 191432343 191432435 -11653097 - MER5A DNA MER1_type -44 145 55 219 267 181 9 chr5 191433505 191433621 -11651911 - MIR3 SINE MIR -41 167 32 329 266 85 0 chr5 191434369 191434463 -11651069 - MER5A DNA MER1_type -2 187 86 385 268 153 19 chr5 191434488 191434645 -11650887 - MER5A DNA MER1_type 0 189 12 1017 161 94 13 chr5 191434951 191435175 -11650357 + MSTB1 LTR MaLR 127 368 -64 390 176 232 8 chr5 191435366 191435491 -11650041 + L1M4 LINE L1 2841 2993 -3153 * 521 181 19 9 chr5 191435487 191435592 -11649940 + L1M4 LINE L1 3807 3912 -2234 192 234 31 47 chr5 191436786 191436815 -11648717 - L2 LINE L2 -1 3271 3243 1129 230 21 4 chr5 191436815 191437050 -11648482 + MER8 DNA MER2_type 1 239 0 192 234 31 47 chr5 191437050 191437084 -11648448 - L2 LINE L2 -29 3243 3209 420 298 64 29 chr5 191437453 191437624 -11647908 - MIR SINE MIR -13 249 73 580 264 11 39 chr5 191438123 191438301 -11647231 + MER5B DNA MER1_type 1 173 -5 395 322 0 0 chr5 191438340 191438455 -11647077 + MLT1K LTR MaLR 183 297 -291 2505 78 0 3 chr5 191438716 191439023 -11646509 + AluSp SINE Alu 1 306 -7 628 201 6 101 chr5 191439053 191439232 -11646300 + MER5B DNA MER1_type 17 178 0 260 385 62 18 chr5 191439233 191439459 -11646073 + L3 LINE CR1 1011 1246 -331 1969 161 45 24 chr5 191439712 191440134 -11645398 + MSTB1 LTR MaLR 2 432 0 755 296 20 0 chr5 191440139 191440342 -11645190 + LTR16C LTR ERVL 131 337 -154 207 344 0 16 chr5 191440344 191440408 -11645124 - L2 LINE L2 -73 3199 3137 252 324 155 0 chr5 191440564 191440712 -11644820 - MIR SINE MIR -70 192 22 238 333 32 16 chr5 191441146 191441272 -11644260 + MLT1K LTR MaLR 156 283 -305 2456 104 0 0 chr5 191441511 191441820 -11643712 - AluSx SINE Alu -3 309 1 1813 143 61 92 chr5 191442458 191442801 -11642731 + MLT2D LTR ERVL 2 354 -60 2558 56 0 10 chr5 191442801 191443106 -11642426 + AluY SINE Alu 1 302 -9 1813 143 61 92 chr5 191443106 191443146 -11642386 + MLT2D LTR ERVL 354 373 -41 414 0 0 0 chr5 191443146 191443192 -11642340 + (CA)n Simple_repeat Simple_repeat 1 46 0 1813 143 61 92 chr5 191443192 191443233 -11642299 + MLT2D LTR ERVL 373 414 0 1802 127 76 4 chr5 191443309 191443585 -11641947 + AluJo SINE Alu 1 296 -16 195 281 56 67 chr5 191443764 191443853 -11641679 - MIR SINE MIR -57 151 64 278 283 48 69 chr5 191443867 191444012 -11641520 - MIR SINE MIR -1 261 120 432 183 37 0 chr5 191444894 191444976 -11640556 + MER45A DNA AcHobo 60 144 -34 1888 130 14 3 chr5 191445025 191445309 -11640223 - AluJb SINE Alu -25 287 1 231 200 0 20 chr5 191445309 191445359 -11640173 + MER45A DNA AcHobo 130 178 0 370 319 37 12 chr5 191445372 191445568 -11639964 - MIR SINE MIR -45 217 14 198 323 73 10 chr5 191445973 191446069 -11639463 + MIR SINE MIR 45 146 -62 422 298 18 41 chr5 191446875 191447046 -11638486 + MIR SINE MIR 28 194 -68 428 231 35 110 chr5 191447055 191447175 -11638357 + MIR SINE MIR 38 143 -119 2013 159 0 10 chr5 191447175 191447484 -11638048 + AluJo SINE Alu 1 306 -6 428 231 35 110 chr5 191447484 191447536 -11637996 + MIR SINE MIR 143 197 -65 202 250 28 42 chr5 191447862 191447934 -11637598 + MIR SINE MIR 96 166 -96 297 271 21 10 chr5 191448237 191448333 -11637199 + LTR16B LTR ERVL 367 463 -1 2089 152 3 0 chr5 191448524 191448834 -11636698 + AluSx SINE Alu 1 311 -1 434 309 26 53 chr5 191450694 191450959 -11634573 - MIR SINE MIR -2 260 3 378 267 128 35 chr5 191451388 191451588 -11633944 - MIR SINE MIR -25 237 17 320 332 31 61 chr5 191452951 191453062 -11632470 + MIR SINE MIR 66 170 -92 1147 173 24 12 chr5 191453062 191453310 -11632222 + L1MB4 LINE L1 5930 6180 0 320 332 31 61 chr5 191453310 191453394 -11632138 + MIR SINE MIR 170 255 -7 1225 228 55 3 chr5 191453766 191454055 -11631477 + LTR40b LTR ERVL 1 304 -158 672 83 0 0 chr5 191454204 191454300 -11631232 + (TGGA)n Simple_repeat Simple_repeat 1 96 0 259 241 0 0 chr5 191454721 191454775 -11630757 + L2 LINE L2 3219 3272 0 393 177 7 7 chr5 191455697 191455841 -11629691 + GA-rich Low_complexity Low_complexity 1 144 0 633 183 146 6 chr5 191456892 191457056 -11628476 - MER53 DNA DNA -2 187 1 218 411 0 0 chr5 191457644 191457734 -11627798 + MIR SINE MIR 58 147 -61 2122 102 74 0 chr5 191457994 191458277 -11627255 - AluSc SINE Alu -3 306 3 287 293 97 79 chr5 191458622 191458963 -11626569 + L2 LINE L2 2926 3272 0 203 182 0 0 chr5 191459644 191459677 -11625855 + (CA)n Simple_repeat Simple_repeat 1 33 0 2146 165 103 0 chr5 191459975 191460411 -11625121 + MER31A LTR ERV1 1 481 -4 2638 80 95 5 chr5 191461342 191461753 -11623779 - LTR7 LTR ERV1 -2 448 1 2352 94 51 0 chr5 191461753 191462124 -11623408 - HERVH LTR ERV1 0 7713 7324 1306 146 18 0 chr5 191462124 191462343 -11623189 - HERVH LTR ERV1 -1894 5819 5597 3117 172 37 32 chr5 191462343 191462999 -11622533 - HERVH LTR ERV1 -2567 5146 4488 3376 97 4 6 chr5 191463001 191463504 -11622028 - HERVH LTR ERV1 -3720 3993 3492 * 19104 100 64 42 chr5 191463494 191466715 -11618817 - HERVH LTR ERV1 -4423 3290 1 2488 95 100 5 chr5 191466717 191467126 -11618406 - LTR7 LTR ERV1 -2 448 1 223 233 100 22 chr5 191467905 191467995 -11617537 - MIR3 SINE MIR -10 198 102 481 298 30 0 chr5 191468053 191468184 -11617348 - MIR SINE MIR -56 206 72 373 316 97 54 chr5 191468843 191469471 -11616061 - L2 LINE L2 -8 3264 2612 417 325 62 25 chr5 191470855 191471015 -11614517 - MIR SINE MIR -14 248 83 782 260 18 18 chr5 191471061 191471280 -11614252 - MER20 DNA MER1_type 0 219 1 261 184 0 0 chr5 191471533 191471582 -11613950 + MER5B DNA MER1_type 1 49 -129 333 298 29 12 chr5 191472065 191472236 -11613296 + (TG)n Simple_repeat Simple_repeat 2 175 0 226 297 40 63 chr5 191472284 191472506 -11613026 - L2 LINE L2 -224 3048 2832 325 210 0 0 chr5 191472731 191472793 -11612739 + AluJ/FLAM SINE Alu 1 62 -240 423 233 148 29 chr5 191473160 191473370 -11612162 - L2 LINE L2 -4 3309 3075 2572 134 19 21 chr5 191473443 191473914 -11611618 + L1MA3 LINE L1 5821 6290 -15 292 319 156 34 chr5 191473996 191474291 -11611241 - L2 LINE L2 -27 3245 2915 543 317 85 27 chr5 191474569 191474862 -11610670 + L2 LINE L2 3003 3312 -1 2042 134 3 0 chr5 191475256 191475548 -11609984 + AluSx SINE Alu 1 293 -19 359 185 171 52 chr5 191475600 191475744 -11609788 - MIR SINE MIR -62 146 9 401 302 50 77 chr5 191476871 191477051 -11608481 + L2 LINE L2 2984 3152 -161 2191 145 0 0 chr5 191477051 191477362 -11608170 - AluSx SINE Alu -1 311 1 401 302 50 77 chr5 191477362 191477519 -11608013 + L2 LINE L2 3152 3312 -1 540 251 15 62 chr5 191477553 191477748 -11607784 - MER5A DNA MER1_type -3 186 1 2229 122 0 0 chr5 191477953 191478256 -11607276 + AluSx SINE Alu 1 303 -9 285 299 56 19 chr5 191478328 191478435 -11607097 - L2 LINE L2 -1 3312 3202 1145 237 96 47 chr5 191479134 191479725 -11605807 - Charlie7 DNA MER1_type -46 2566 1947 421 196 168 28 chr5 191479735 191479878 -11605654 - Charlie7 DNA MER1_type -2122 490 328 418 262 89 56 chr5 191479906 191480120 -11605412 - Charlie7 DNA MER1_type -2353 259 39 206 269 197 78 chr5 191480502 191480695 -11604837 + MIR SINE MIR 47 262 0 218 243 27 0 chr5 191481251 191481325 -11604207 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 559 215 45 68 chr5 191481370 191481547 -11603985 - MIR SINE MIR -13 249 77 225 236 36 0 chr5 191481931 191481986 -11603546 + CT-rich Low_complexity Low_complexity 1 57 0 274 167 21 0 chr5 191482593 191482641 -11602891 - MIR SINE MIR -60 148 100 279 208 0 0 chr5 191484000 191484053 -11601479 - MIR SINE MIR -114 148 96 317 300 72 5 chr5 191485632 191485805 -11599727 + L1MC4a LINE L1 5675 5849 -298 541 279 101 0 chr5 191485887 191486066 -11599466 + MIR SINE MIR 66 262 0 203 184 0 0 chr5 191486129 191486167 -11599365 + (TA)n Simple_repeat Simple_repeat 2 39 0 571 172 234 0 chr5 191486259 191486404 -11599128 - L1MC1 LINE L1 0 6333 6155 209 257 179 36 chr5 191486881 191487021 -11598511 + MIR SINE MIR 35 194 -68 1935 156 16 10 chr5 191487331 191487639 -11597893 + AluJb SINE Alu 3 312 0 276 334 84 53 chr5 191489072 191489428 -11596104 + L2 LINE L2 2905 3271 -1 296 237 257 6 chr5 191489479 191489654 -11595878 + MIR SINE MIR 16 231 -31 1170 247 62 51 chr5 191489739 191490188 -11595344 - LTR16B LTR ERVL 0 464 11 1083 187 96 28 chr5 191491049 191491378 -11594154 - MSTD LTR MaLR 0 396 3 2195 118 7 3 chr5 191491421 191491726 -11593806 + AluSq SINE Alu 1 306 -7 284 215 54 32 chr5 191491741 191491834 -11593698 - MIR SINE MIR -135 127 33 360 342 54 0 chr5 191492416 191492565 -11592967 - MIR SINE MIR -57 205 49 1334 84 84 16 chr5 191493011 191493201 -11592331 + AluSp SINE Alu 86 288 -25 22 0 0 0 chr5 191493201 191493223 -11592309 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 191493339 191493379 -11592153 + AT_rich Low_complexity Low_complexity 1 40 0 195 42 0 0 chr5 191493636 191493660 -11591872 + (A)n Simple_repeat Simple_repeat 1 24 0 199 292 62 0 chr5 191494847 191494912 -11590620 - L2 LINE L2 -18 3254 3186 271 254 0 0 chr5 191495621 191495684 -11589848 + (TG)n Simple_repeat Simple_repeat 2 64 0 750 268 47 4 chr5 191495739 191495974 -11589558 + MIR SINE MIR 18 262 0 241 291 51 60 chr5 191495978 191496095 -11589437 + L2 LINE L2 3137 3252 -20 215 315 14 0 chr5 191496278 191496351 -11589181 + MIR SINE MIR 38 111 -97 857 271 0 5 chr5 191497089 191497277 -11588255 + MER58A DNA MER1_type 1 187 -37 2379 68 0 0 chr5 191497295 191497601 -11587931 - AluY SINE Alu 0 306 1 22 70 0 0 chr5 191498022 191498065 -11587467 + AT_rich Low_complexity Low_complexity 1 43 0 7268 42 0 0 chr5 191498065 191499087 -11586445 - L1PA5 LINE L1 -8 6146 5109 5181 48 0 0 chr5 191499087 191499718 -11585814 + L1PA5 LINE L1 4476 5106 -1040 207 100 0 0 chr5 191499891 191499921 -11585611 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2200 122 0 0 chr5 191499924 191500218 -11585314 + AluSq SINE Alu 1 294 -19 393 303 56 7 chr5 191500314 191500456 -11585076 - MIR SINE MIR -86 176 28 246 260 164 27 chr5 191500948 191501094 -11584438 - L2 LINE L2 0 3272 3107 423 217 47 0 chr5 191502624 191502730 -11582802 + MIR SINE MIR 64 174 -88 3979 150 40 48 chr5 191502730 191503003 -11582529 - L1MB8 LINE L1 0 6178 5904 441 0 0 0 chr5 191503003 191503052 -11582480 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 2048 109 33 0 chr5 191503052 191503328 -11582204 - AluSq SINE Alu -28 285 1 3979 150 40 48 chr5 191503328 191503441 -11582091 - L1MB8 LINE L1 -273 5905 5793 237 65 0 0 chr5 191503441 191503472 -11582060 + (TA)n Simple_repeat Simple_repeat 2 32 0 3979 150 40 48 chr5 191503472 191503914 -11581618 - L1MB8 LINE L1 -385 5793 5355 306 65 98 0 chr5 191504214 191504306 -11581226 + (TA)n Simple_repeat Simple_repeat 2 102 0 308 211 99 0 chr5 191504307 191504378 -11581154 - HsTC2 DNA Tc2 -1820 78 1 2150 96 24 7 chr5 191505710 191506002 -11579530 - AluSx SINE Alu -15 297 1 1603 170 6 43 chr5 191506159 191506194 -11579338 - AluJb SINE Alu 0 312 277 213 39 0 0 chr5 191506194 191506220 -11579312 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1603 170 6 43 chr5 191506220 191506508 -11579024 - AluJb SINE Alu -35 277 1 227 393 68 0 chr5 191506834 191506997 -11578535 + MIR3 SINE MIR 30 203 -5 203 280 0 0 chr5 191507545 191507595 -11577937 - L2 LINE L2 -83 3189 3140 2063 150 0 0 chr5 191508190 191508497 -11577035 - AluSq SINE Alu -6 307 1 24 32 0 0 chr5 191509343 191509374 -11576158 + AT_rich Low_complexity Low_complexity 1 31 0 550 299 62 17 chr5 191509546 191509787 -11575745 - MIR SINE MIR 0 262 11 231 265 0 0 chr5 191510353 191510421 -11575111 - MIR SINE MIR -70 192 125 185 233 0 0 chr5 191510445 191510488 -11575044 + MIR SINE MIR 125 167 -95 358 337 73 0 chr5 191510765 191510943 -11574589 - MIR SINE MIR -48 214 24 206 346 39 0 chr5 191513831 191513935 -11571597 + L3 LINE CR1 637 744 -833 2369 101 0 7 chr5 191514069 191514377 -11571155 + AluSx SINE Alu 5 310 -2 1890 125 97 29 chr5 191514508 191514859 -11570673 + THE1C LTR MaLR 1 375 0 2289 89 14 3 chr5 191514929 191515220 -11570312 + AluSc SINE Alu 1 294 -15 43 64 0 0 chr5 191515416 191515494 -11570038 + AT_rich Low_complexity Low_complexity 1 78 0 716 185 0 8 chr5 191516390 191516509 -11569023 + MER68 LTR ERV1 445 562 0 192 271 213 25 chr5 191516521 191516643 -11568889 + MER5B DNA MER1_type 1 145 -33 2295 116 135 5 chr5 191516870 191517249 -11568283 + MSTA LTR MaLR 1 428 0 189 237 18 79 chr5 191518591 191518705 -11566827 + MIR SINE MIR 102 208 -54 597 267 39 52 chr5 191519886 191520091 -11565441 - MIR SINE MIR -30 232 28 2172 109 0 0 chr5 191520091 191520400 -11565132 + AluSq SINE Alu 1 309 0 597 267 39 52 chr5 191520400 191520425 -11565107 - MIR SINE MIR -234 28 4 358 206 114 61 chr5 191520641 191520772 -11564760 + MIR SINE MIR 13 150 -112 376 322 14 21 chr5 191521870 191522013 -11563519 + L2 LINE L2 3172 3313 0 636 270 52 0 chr5 191522083 191522257 -11563275 + MIR SINE MIR 31 213 -49 2258 89 0 0 chr5 191522257 191522567 -11562965 + AluY SINE Alu 1 310 0 586 257 33 0 chr5 191522709 191522861 -11562671 + MER103 DNA DNA 8 164 -2 1734 175 45 0 chr5 191522963 191523254 -11562278 + AluJb SINE Alu 2 305 -7 2024 126 0 14 chr5 191523388 191523719 -11561813 - AluSx SINE Alu 0 327 1 1942 149 7 7 chr5 191523722 191524024 -11561508 - AluSx SINE Alu -10 302 1 2235 132 39 6 chr5 191524242 191524597 -11560935 - MLT1B LTR MaLR 0 390 24 2316 103 0 0 chr5 191524731 191525021 -11560511 - AluSc SINE Alu -19 290 1 2811 111 36 73 chr5 191525536 191526041 -11559491 - LTR19A LTR ERV1 0 486 1 4915 133 68 31 chr5 191526805 191527225 -11558307 + MER4D LTR ERV1 1 404 -499 2245 122 0 0 chr5 191527225 191527528 -11558004 - AluSx SINE Alu -7 305 3 4915 133 68 31 chr5 191527528 191527978 -11557554 + MER4D LTR ERV1 404 903 0 1878 163 3 0 chr5 191528083 191528410 -11557122 - AluSx SINE Alu 0 328 1 1635 146 20 51 chr5 191528424 191528718 -11556814 - AluJb SINE Alu -27 285 1 2225 132 0 0 chr5 191528978 191529289 -11556243 + AluSx SINE Alu 1 311 -1 4048 138 6 20 chr5 191529309 191529833 -11555699 + MER41B LTR ERV1 1 516 -119 2256 123 0 0 chr5 191529833 191530135 -11555397 - AluSx SINE Alu -10 302 1 4048 138 6 20 chr5 191530135 191530254 -11555278 + MER41B LTR ERV1 516 635 0 2317 113 0 0 chr5 191530566 191530868 -11554664 - AluSq SINE Alu -11 302 1 661 283 6 17 chr5 191530890 191531063 -11554469 - MLT1F LTR MaLR -371 171 1 2228 194 97 13 chr5 191531107 191531580 -11553952 - MLT2B1 LTR ERVL -6 514 2 481 260 40 58 chr5 191531608 191531781 -11553751 + MLT1K LTR MaLR 82 251 -337 30 27 0 0 chr5 191532529 191532566 -11552966 + AT_rich Low_complexity Low_complexity 1 37 0 1128 128 0 0 chr5 191533297 191533476 -11552056 + (CCA)n Simple_repeat Simple_repeat 1 179 0 260 200 47 47 chr5 191534674 191534759 -11550773 - MER5A DNA MER1_type -96 93 9 317 226 157 17 chr5 191535234 191535349 -11550183 + MIR SINE MIR 26 156 -106 209 262 219 18 chr5 191536015 191536179 -11549353 - MIR SINE MIR -14 248 52 836 284 128 55 chr5 191536288 191536919 -11548613 - HAL1 LINE L1 -1830 677 1 180 0 0 0 chr5 191536942 191536962 -11548570 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2288 103 3 16 chr5 191536966 191537278 -11548254 - AluSx SINE Alu -4 308 1 182 191 21 0 chr5 191537444 191537491 -11548041 + GA-rich Low_complexity Low_complexity 3 50 0 2196 142 0 0 chr5 191538177 191538488 -11547044 - AluSx SINE Alu -1 311 1 23 39 0 39 chr5 191540107 191540125 -11545407 + AT_rich Low_complexity Low_complexity 1 18 -32 1712 108 104 8 chr5 191540125 191540408 -11545124 - AluJb SINE Alu 0 308 1 23 39 0 39 chr5 191540408 191540440 -11545092 + AT_rich Low_complexity Low_complexity 18 50 0 369 207 0 0 chr5 191540969 191541051 -11544481 + (TA)n Simple_repeat Simple_repeat 1 82 0 2161 113 7 3 chr5 191542271 191542564 -11542968 - AluSx SINE Alu -18 294 1 237 33 0 0 chr5 191542674 191542704 -11542828 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 240 35 0 0 chr5 191542703 191542732 -11542800 + (TA)n Simple_repeat Simple_repeat 2 30 0 2108 124 0 14 chr5 191542732 191543022 -11542510 - AluSx SINE Alu -26 286 1 24 32 0 0 chr5 191543023 191543054 -11542478 + AT_rich Low_complexity Low_complexity 1 31 0 183 268 261 0 chr5 191543160 191543302 -11542230 + MIR SINE MIR 30 208 -54 3483 190 66 14 chr5 191543446 191544280 -11541252 - L1MB8 LINE L1 0 6178 5286 2323 68 0 0 chr5 191544280 191544597 -11540935 - AluSc SINE Alu 0 317 1 3483 190 66 14 chr5 191544597 191544650 -11540882 - L1MB8 LINE L1 -892 5286 5237 2065 136 0 20 chr5 191544799 191545101 -11540431 + AluSx SINE Alu 1 296 -16 1493 132 57 9 chr5 191545280 191545508 -11540024 - AluSg/x SINE Alu -8 304 66 5103 90 4 6 chr5 191545585 191546316 -11539216 - L1MA2 LINE L1 0 6304 5575 286 288 47 58 chr5 191546829 191547020 -11538512 + MER5A DNA MER1_type 1 189 0 231 36 0 0 chr5 191547028 191547056 -11538476 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2099 131 0 10 chr5 191547162 191547468 -11538064 + AluSx SINE Alu 1 303 -9 446 288 52 52 chr5 191547789 191548265 -11537267 - L1MC5 LINE L1 -34 7927 7452 983 292 30 36 chr5 191548368 191548899 -11536633 + L1MC4a LINE L1 6412 6939 -869 1016 217 72 85 chr5 191548945 191549119 -11536413 + L1MC5 LINE L1 7358 7533 -428 1925 156 6 16 chr5 191549119 191549433 -11536099 + AluJb SINE Alu 1 311 -1 1016 217 72 85 chr5 191549433 191549792 -11535740 + L1MC5 LINE L1 7533 7886 -75 2398 89 7 0 chr5 191549792 191550095 -11535437 - AluSp SINE Alu -8 305 1 1016 217 72 85 chr5 191550095 191550114 -11535418 + L1MC5 LINE L1 7886 7904 -57 23 0 0 0 chr5 191550514 191550537 -11534995 + AT_rich Low_complexity Low_complexity 1 23 0 2320 102 0 6 chr5 191550537 191550871 -11534661 - L1PB1 LINE L1 0 6151 5820 1384 68 21 0 chr5 191550873 191551065 -11534467 + L1PB1 LINE L1 5611 5806 -345 1581 187 52 38 chr5 191552101 191552470 -11533062 - MLT1A2 LTR MaLR 0 374 1 2003 132 54 3 chr5 191552678 191552973 -11532559 + AluSg SINE Alu 1 310 0 2354 87 0 0 chr5 191554497 191554797 -11530735 - AluSg SINE Alu -10 300 1 1729 250 85 25 chr5 191554889 191555062 -11530470 - HsTC2a DNA Tc2 -1161 739 578 1795 116 102 4 chr5 191555062 191555337 -11530195 - AluSx SINE Alu -10 302 1 1729 250 85 25 chr5 191555337 191555798 -11529734 - HsTC2a DNA Tc2 -1322 578 67 1529 109 5 18 chr5 191555800 191556021 -11529511 - AluSg SINE Alu -92 218 1 716 253 103 0 chr5 191556833 191557066 -11528466 - MIR SINE MIR -4 258 2 181 343 19 19 chr5 191557072 191557177 -11528355 - MIR SINE MIR -70 192 88 2837 10 0 0 chr5 191557528 191557839 -11527693 + AluYa5 SINE Alu 1 311 0 21 0 0 0 chr5 191558492 191558513 -11527019 + AT_rich Low_complexity Low_complexity 1 21 0 321 289 55 39 chr5 191558746 191558874 -11526658 + L1ME LINE L1 254 383 -5687 1803 180 0 3 chr5 191559038 191559333 -11526199 - AluJb SINE Alu -18 294 1 363 44 0 0 chr5 191559555 191559600 -11525932 + (A)n Simple_repeat Simple_repeat 1 45 0 712 248 96 65 chr5 191559634 191560105 -11525427 + L1ME LINE L1 704 1159 -5102 180 0 0 0 chr5 191560105 191560125 -11525407 + (CA)n Simple_repeat Simple_repeat 2 21 0 712 248 96 65 chr5 191560125 191560526 -11525006 + L1ME LINE L1 1159 1657 -4604 245 115 0 19 chr5 191561080 191561132 -11524400 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 312 322 79 83 chr5 191561153 191561672 -11523860 - L1M2 LINE L1 -5432 1417 901 28 0 0 0 chr5 191561915 191561943 -11523589 + GC_rich Low_complexity Low_complexity 1 28 0 310 324 63 9 chr5 191562014 191562125 -11523407 - L2 LINE L2 -1 3271 3155 418 185 194 28 chr5 191562280 191562388 -11523144 - L2 LINE L2 0 3313 3188 206 303 67 51 chr5 191562384 191562579 -11522953 - L2 LINE L2 -254 3018 2821 * 214 259 69 0 chr5 191563383 191563441 -11522091 - MIR SINE MIR -131 131 70 303 344 27 38 chr5 191564209 191564315 -11521217 - MIR SINE MIR -13 249 143 186 43 0 0 chr5 191564315 191564338 -11521194 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2124 102 14 0 chr5 191564340 191564624 -11520908 - AluSx SINE Alu -24 288 1 303 344 27 38 chr5 191564624 191564700 -11520832 - MIR SINE MIR -120 142 66 747 252 110 38 chr5 191565013 191565331 -11520201 - MER77 LTR ERV1 -6 599 259 2310 90 0 3 chr5 191565654 191565954 -11519578 + AluY SINE Alu 1 299 -12 1723 172 6 41 chr5 191566096 191566410 -11519122 + 7SLRNA srpRNA srpRNA 1 303 -17 22 35 0 0 chr5 191566693 191566722 -11518810 + AT_rich Low_complexity Low_complexity 1 29 0 557 215 36 99 chr5 191567007 191567230 -11518302 - L1ME1 LINE L1 -5 6161 5953 1664 191 14 0 chr5 191567523 191567679 -11517853 - AluJb SINE Alu -25 287 124 252 0 0 0 chr5 191567679 191567707 -11517825 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1664 191 14 0 chr5 191567707 191567833 -11517699 - AluJb SINE Alu -188 124 1 780 119 32 8 chr5 191568585 191568711 -11516821 - FLAM_A SINE Alu 0 133 5 1310 214 43 48 chr5 191568726 191569124 -11516408 - MLT1C LTR MaLR -71 396 1 254 172 94 16 chr5 191569164 191569228 -11516304 - MIR SINE MIR -57 205 137 16217 122 16 19 chr5 191569473 191570315 -11515217 - L1PA10 LINE L1 -5 6478 5635 2255 109 0 0 chr5 191570315 191570608 -11514924 - AluSg SINE Alu -17 293 1 16217 122 16 19 chr5 191570608 191572166 -11513366 - L1PA10 LINE L1 -848 5635 4087 2034 154 3 0 chr5 191572166 191572472 -11513060 - AluSx SINE Alu -5 307 1 16217 122 16 19 chr5 191572472 191573592 -11511940 - L1PA10 LINE L1 -2396 4087 2965 1271 165 8 0 chr5 191573692 191573929 -11511603 - L1P LINE L1 -1852 4294 4056 1773 148 10 26 chr5 191574127 191574437 -11511095 + AluJb SINE Alu 1 305 -7 736 102 23 0 chr5 191574489 191574617 -11510915 + Tigger2 DNA MER2_type 187 317 -2401 4097 103 41 20 chr5 191574621 191575278 -11510254 + Tigger2 DNA MER2_type 1306 1976 -742 11062 175 47 11 chr5 191576603 191579096 -11506436 - L1P LINE L1 -2794 3352 769 1183 183 8 4 chr5 191579092 191579327 -11506205 - L1PA10 LINE L1 -5632 243 8 * 25 0 0 0 chr5 191580199 191580224 -11505308 + AT_rich Low_complexity Low_complexity 1 25 0 1541 189 29 7 chr5 191580224 191580505 -11505027 - AluJb SINE Alu -25 287 1 350 349 215 15 chr5 191580556 191580946 -11504586 + L2 LINE L2 2805 3272 0 9819 180 57 46 chr5 191581771 191584161 -11501371 - Cheshire DNA MER1_type -3 2417 1 286 340 21 0 chr5 191584379 191584476 -11501056 - L2 LINE L2 -448 2866 2768 28 48 0 0 chr5 191584699 191584741 -11500791 + AT_rich Low_complexity Low_complexity 1 42 0 2270 89 14 3 chr5 191585030 191585322 -11500210 - AluSc SINE Alu -14 295 1 521 304 83 11 chr5 191585383 191585564 -11499968 - MIR SINE MIR -62 200 7 5400 128 30 27 chr5 191586211 191587178 -11498354 - L1MC1 LINE L1 -1 6332 5363 3880 120 81 14 chr5 191587178 191587871 -11497661 - Tigger2 DNA MER2_type 0 2718 1980 4097 103 41 20 chr5 191588753 191589410 -11496122 - Tigger2 DNA MER2_type -742 1976 1306 1380 142 93 43 chr5 191589414 191589594 -11495938 - Tigger2 DNA MER2_type -2401 317 115 1919 132 6 26 chr5 191589594 191589905 -11495627 - AluJb SINE Alu -7 305 1 1380 142 93 43 chr5 191589905 191590026 -11495506 - Tigger2 DNA MER2_type -2603 115 1 5200 203 30 63 chr5 191590027 191590611 -11494921 - L1MC1 LINE L1 -784 5362 4760 1385 206 93 16 chr5 191590611 191590976 -11494556 - MSTD LTR MaLR -2 394 2 5200 203 30 63 chr5 191590976 191591985 -11493547 - L1MC1 LINE L1 -1386 4760 3822 293 262 19 19 chr5 191591993 191592096 -11493436 + CT-rich Low_complexity Low_complexity 1 103 0 21 0 0 0 chr5 191592279 191592300 -11493232 + AT_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 191593352 191593401 -11492131 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 191593780 191593809 -11491723 + AT_rich Low_complexity Low_complexity 1 29 0 482 188 295 13 chr5 191593818 191593967 -11491565 - AluYa5 SINE Alu -18 293 103 1945 134 178 6 chr5 191594419 191594784 -11490748 - MSTA LTR MaLR 0 428 1 1386 45 11 0 chr5 191595073 191595252 -11490280 - L1PA8 LINE L1 0 6172 5992 247 336 118 17 chr5 191595784 191595903 -11489629 - MIR SINE MIR -51 211 81 27 0 0 0 chr5 191595951 191595978 -11489554 + AT_rich Low_complexity Low_complexity 1 27 0 265 109 328 0 chr5 191596022 191596086 -11489446 + L1MA4 LINE L1 6211 6295 -5 205 258 0 16 chr5 191596191 191596253 -11489279 + (CAAAC)n Simple_repeat Simple_repeat 2 62 0 2565 53 0 0 chr5 191596456 191596755 -11488777 + AluY SINE Alu 3 301 -10 189 0 0 0 chr5 191597429 191597450 -11488082 + (TA)n Simple_repeat Simple_repeat 1 21 0 223 288 0 17 chr5 191597881 191597940 -11487592 - MER5C DNA MER1_type -249 75 18 2178 110 0 0 chr5 191599492 191599791 -11485741 + AluSx SINE Alu 3 301 -11 198 103 0 0 chr5 191600284 191600313 -11485219 + (TTC)n Simple_repeat Simple_repeat 2 30 0 5570 59 1 6 chr5 191600351 191601061 -11484471 - L1PA7 LINE L1 -2 6152 5446 832 68 8 0 chr5 191601065 191601182 -11484350 - L1PA7 LINE L1 -3655 2491 2374 * 31295 101 21 24 chr5 191601179 191606473 -11479059 - L1P3 LINE L1 -723 5764 424 25 19 8 0 chr5 191607959 191608033 -11477499 + AT_rich Low_complexity Low_complexity 1 32 0 2376 234 64 5 chr5 191608960 191609585 -11475947 - L1MC4 LINE L1 -143 7899 7238 925 228 23 0 chr5 191609590 191609809 -11475723 - L1MC4 LINE L1 -958 7084 6861 188 350 73 29 chr5 191610360 191610497 -11475035 + MIR SINE MIR 88 230 -32 4813 137 51 6 chr5 191610793 191611610 -11473922 + L1PA16 LINE L1 5313 6166 0 186 260 169 0 chr5 191612241 191612318 -11473214 - MIR3 SINE MIR -11 197 108 186 103 0 0 chr5 191612512 191612541 -11472991 + (T)n Simple_repeat Simple_repeat 1 29 0 632 215 57 14 chr5 191613393 191613602 -11471930 - L1MC5 LINE L1 -37 7924 7707 302 170 99 106 chr5 191614792 191614933 -11470599 + HAL1 LINE L1 286 425 -2082 1934 252 87 35 chr5 191615051 191615108 -11470424 + HAL1 LINE L1 859 912 -1595 1591 125 31 21 chr5 191615108 191615396 -11470136 + L1MD2 LINE L1 6067 6357 -2 1934 252 87 35 chr5 191615396 191616139 -11469393 + HAL1 LINE L1 912 1701 -806 627 243 162 84 chr5 191616194 191616849 -11468683 + HAL1 LINE L1 1802 2507 0 285 319 96 64 chr5 191618178 191618429 -11467103 - MIR SINE MIR -1 261 3 207 0 0 0 chr5 191618454 191618477 -11467055 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 347 230 3 58 chr5 191618970 191619297 -11466235 + (TTATA)n Simple_repeat Simple_repeat 1 308 0 2191 111 3 3 chr5 191619658 191619956 -11465576 - AluSx SINE Alu -14 298 1 198 174 174 0 chr5 191621174 191621220 -11464312 + L2 LINE L2 3259 3312 -1 225 0 0 0 chr5 191621343 191621368 -11464164 + (CA)n Simple_repeat Simple_repeat 2 26 0 24 77 0 0 chr5 191622036 191622088 -11463444 + AT_rich Low_complexity Low_complexity 1 52 0 320 250 135 20 chr5 191622136 191622284 -11463248 + L1ME4a LINE L1 5956 6120 -1 3381 208 51 33 chr5 191622626 191623553 -11461979 - L1ME1 LINE L1 -31 6135 5194 363 60 0 0 chr5 191623553 191623603 -11461929 - L1PA6 LINE L1 0 6154 6105 6670 114 33 23 chr5 191623604 191625903 -11459629 - L1P2 LINE L1 -568 5586 1 3444 228 38 20 chr5 191625900 191626927 -11458605 - L1ME1 LINE L1 -943 5203 4155 * 1653 159 11 0 chr5 191626927 191627191 -11458341 - AluSx SINE Alu -2 310 44 3444 228 38 20 chr5 191627191 191627205 -11458327 - L1ME1 LINE L1 -1991 4155 4143 588 267 51 21 chr5 191628697 191628933 -11456599 - L1ME3A LINE L1 -225 5945 5703 475 273 63 54 chr5 191628957 191629056 -11456476 - L1ME3A LINE L1 -555 5607 5510 726 180 236 0 chr5 191629056 191629234 -11456298 - MER58A DNA MER1_type 0 224 5 475 273 63 54 chr5 191629234 191629536 -11455996 - L1ME3A LINE L1 -652 5510 5200 1127 296 75 26 chr5 191629679 191630218 -11455314 - L1MC4a LINE L1 -1755 6053 5465 1000 42 0 0 chr5 191630218 191630336 -11455196 - L1PA7 LINE L1 -11 6143 6026 1127 296 75 26 chr5 191630336 191630553 -11454979 - L1MC4a LINE L1 -2343 5465 5260 5970 222 106 26 chr5 191630596 191633321 -11452211 - L1ME1 LINE L1 -284 5865 2915 * 39104 66 26 3 chr5 191633314 191639354 -11446178 - L1PA5 LINE L1 0 6154 4 1123 224 91 24 chr5 191639361 191639811 -11445721 - L1ME1 LINE L1 -3188 2941 2462 753 221 41 32 chr5 191639828 191640062 -11445470 - L1M4 LINE L1 -3760 2386 2152 339 319 86 78 chr5 191640074 191640306 -11445226 - L1ME1 LINE L1 -5539 580 347 549 382 0 0 chr5 191640473 191640617 -11444915 - MER91A DNA MER1_type -12 184 41 812 284 85 55 chr5 191641209 191642185 -11443347 + L1ME3A LINE L1 560 1609 -4701 1883 128 11 14 chr5 191642297 191642623 -11442909 - AluSx SINE Alu 0 325 1 873 314 78 42 chr5 191643072 191643255 -11442277 + L1ME3A LINE L1 2213 2388 -3741 1224 174 30 4 chr5 191643255 191643485 -11442047 + MER46A DNA MER2_type 1 236 0 873 314 78 42 chr5 191643485 191644296 -11441236 + L1ME3A LINE L1 2388 3243 -2886 631 285 100 54 chr5 191644509 191644863 -11440669 + L1ME3A LINE L1 5248 5681 -468 2107 124 0 51 chr5 191644863 191645218 -11440314 + MER1B DNA MER1_type 1 337 0 631 285 100 54 chr5 191645218 191645443 -11440089 + L1ME3A LINE L1 5681 5894 -255 21 71 0 0 chr5 191646546 191646588 -11438944 + AT_rich Low_complexity Low_complexity 1 42 0 1484 194 89 24 chr5 191646698 191647070 -11438462 - L1MA9 LINE L1 -39 6273 5878 1919 139 7 3 chr5 191647216 191647504 -11438028 - AluSx SINE Alu -23 289 1 181 250 0 71 chr5 191648002 191648058 -11437474 + L2 LINE L2 3214 3265 -7 282 239 337 18 chr5 191648345 191648508 -11437024 - MIR SINE MIR -5 257 43 337 266 51 12 chr5 191648983 191649145 -11436387 + MIR SINE MIR 8 262 0 2732 212 90 3 chr5 191649457 191650037 -11435495 + MER82 DNA MER2_type 23 652 -1 687 276 17 38 chr5 191650208 191650447 -11435085 - L2 LINE L2 0 3313 3080 670 276 113 76 chr5 191650462 191650923 -11434609 - MLT1G LTR MaLR -35 520 43 739 328 53 0 chr5 191651030 191651277 -11434255 - L2 LINE L2 -2098 1216 957 1854 240 27 11 chr5 191651280 191651805 -11433727 + L1M4 LINE L1 4266 4798 -1348 1260 191 51 12 chr5 191651808 191652064 -11433468 + AluJo SINE Alu 3 268 -44 2980 160 34 23 chr5 191652065 191652802 -11432730 + L1M4 LINE L1 5058 5791 -387 * 5743 145 36 22 chr5 191652797 191654312 -11431220 + L1MA4A LINE L1 4751 6301 -2 1733 181 67 20 chr5 191654291 191654694 -11430838 + L1MB8 LINE L1 5757 6178 0 * 1183 297 32 9 chr5 191654744 191655087 -11430445 - L2 LINE L2 -2599 715 365 467 308 53 0 chr5 191656215 191656348 -11429184 - MIR SINE MIR -99 163 24 337 293 75 0 chr5 191656736 191656842 -11428690 - MIR SINE MIR -91 171 58 25 0 0 0 chr5 191657122 191657147 -11428385 + AT_rich Low_complexity Low_complexity 1 25 0 335 213 96 21 chr5 191657345 191657439 -11428093 + MIR SINE MIR 134 234 -28 288 0 0 0 chr5 191657449 191657481 -11428051 + (CA)n Simple_repeat Simple_repeat 2 33 0 393 294 75 56 chr5 191657564 191657800 -11427732 - L1ME LINE L1 -349 5772 5523 1926 116 58 33 chr5 191657800 191658129 -11427403 + MER1B DNA MER1_type 1 337 0 393 294 75 56 chr5 191658129 191658304 -11427228 - L1ME LINE L1 -598 5523 5353 446 163 0 22 chr5 191658388 191658575 -11426957 + (TA)n Simple_repeat Simple_repeat 1 182 0 250 83 0 0 chr5 191658575 191658623 -11426909 + LTR66 LTR ERVL 392 439 -171 * 280 129 0 32 chr5 191658587 191658649 -11426883 - LTR66 LTR ERVL -171 439 380 27 73 0 0 chr5 191658685 191658740 -11426792 + AT_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr5 191659003 191659027 -11426505 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 191659243 191659265 -11426267 + AT_rich Low_complexity Low_complexity 1 22 0 1345 113 5 5 chr5 191659508 191659694 -11425838 - AluSp SINE Alu -127 186 1 341 333 53 0 chr5 191659827 191659959 -11425573 + L2 LINE L2 3175 3313 0 2314 60 4 0 chr5 191660175 191660456 -11425076 + AluY SINE Alu 3 284 -27 354 45 0 0 chr5 191660456 191660500 -11425032 + (CA)n Simple_repeat Simple_repeat 2 45 0 2768 211 42 23 chr5 191660772 191661412 -11424120 - MER82 DNA MER2_type 0 653 2 937 55 78 0 chr5 191662338 191662466 -11423066 + MER85 DNA T2_type 1 138 -1 853 252 247 16 chr5 191662665 191662916 -11422616 + L2 LINE L2 2712 2904 -409 2387 165 21 16 chr5 191662916 191663347 -11422185 - Tigger2a DNA MER2_type 0 434 2 853 252 247 16 chr5 191663347 191663533 -11421999 + L2 LINE L2 2904 3246 -67 738 329 162 12 chr5 191663726 191664221 -11421311 + L2 LINE L2 2286 2854 -460 1287 108 6 0 chr5 191664253 191664429 -11421103 - AluSq SINE Alu -136 177 1 341 343 67 11 chr5 191664513 191664691 -11420841 + L2 LINE L2 3126 3313 0 1301 163 0 53 chr5 191664890 191665135 -11420397 + MER46A DNA MER2_type 5 236 0 812 259 72 17 chr5 191665205 191665609 -11419923 + MLT1J LTR MaLR 1 494 -17 286 190 0 0 chr5 191666430 191666488 -11419044 + L1ME LINE L1 5798 5855 -266 314 258 19 63 chr5 191666596 191666755 -11418777 + L1MC4a LINE L1 4883 5034 -1112 2191 133 9 0 chr5 191666880 191667196 -11418336 - MER1B DNA MER1_type -20 319 1 1240 286 97 12 chr5 191667264 191667760 -11417772 + L1MC4a LINE L1 5261 5798 -2010 7594 30 0 17 chr5 191667782 191669401 -11416131 - L1PA3 LINE L1 -3 6152 4549 9066 29 0 1 chr5 191669401 191670477 -11415055 + L1PA3 LINE L1 3451 4525 -1621 442 291 8 0 chr5 191670474 191670601 -11414931 + L1MC4a LINE L1 5786 5913 -1895 * 305 239 12 33 chr5 191670747 191670838 -11414694 - MER91B DNA MER1_type -14 182 87 24 32 0 0 chr5 191671498 191671529 -11414003 + AT_rich Low_complexity Low_complexity 1 31 0 286 293 69 17 chr5 191673427 191673543 -11411989 - MIR SINE MIR -21 241 120 265 209 45 0 chr5 191673700 191673767 -11411765 - MIR SINE MIR -10 252 183 984 40 80 0 chr5 191674036 191674161 -11411371 - MER85 DNA T2_type -4 135 1 441 274 75 40 chr5 191674756 191675008 -11410524 - MIR SINE MIR 0 262 2 201 310 206 45 chr5 191675012 191675367 -11410165 + L2 LINE L2 2291 2702 -612 250 329 0 0 chr5 191675378 191675454 -11410078 - L1MC4 LINE L1 -40 8002 7927 553 314 101 22 chr5 191675610 191675655 -11409877 - L1ME3A LINE L1 -229 5941 5901 2234 114 0 7 chr5 191675655 191675963 -11409569 - AluSq SINE Alu -7 306 1 553 314 101 22 chr5 191675963 191676363 -11409169 - L1ME3A LINE L1 -269 5901 5461 277 206 11 11 chr5 191677063 191677155 -11408377 + L1ME LINE L1 5290 5381 -781 1601 184 73 9 chr5 191677157 191677499 -11408033 - MLT1A1 LTR MaLR -1 364 1 4258 232 125 65 chr5 191677509 191678726 -11406806 - MLT1A1-int LTR MaLR -11 1724 422 2258 94 10 3 chr5 191678726 191679025 -11406507 + AluSx SINE Alu 1 301 -11 4258 232 125 65 chr5 191679025 191679114 -11406418 - MLT1A1-int LTR MaLR -1313 422 340 486 153 108 45 chr5 191679114 191679225 -11406307 - MLT1A1 LTR MaLR -217 148 31 5066 205 38 30 chr5 191679376 191679468 -11406064 + L1MB8 LINE L1 4060 4150 -2028 216 0 0 0 chr5 191679468 191679492 -11406040 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5066 205 38 30 chr5 191679492 191681472 -11404060 + L1MB8 LINE L1 4150 6152 -26 2714 225 62 39 chr5 191681491 191682335 -11403197 + L1ME3 LINE L1 5296 6158 -4 292 302 86 14 chr5 191682342 191682481 -11403051 + L1ME LINE L1 5688 5836 -334 507 268 166 39 chr5 191682825 191682939 -11402593 + HAL1 LINE L1 5 103 -2404 2134 119 51 28 chr5 191682939 191683293 -11402239 + THE1B LTR MaLR 1 362 -2 11566 86 19 1 chr5 191683295 191684846 -11400686 + THE1B-int LTR MaLR 1 1580 0 1889 92 71 82 chr5 191684846 191685214 -11400318 + THE1B LTR MaLR 1 364 0 507 268 166 39 chr5 191685214 191687208 -11398324 + HAL1 LINE L1 102 2507 0 301 342 19 31 chr5 191687276 191687437 -11398095 - L2 LINE L2 -188 3084 2926 180 366 56 0 chr5 191687481 191687552 -11397980 + L2 LINE L2 3239 3313 0 1801 168 7 3 chr5 191687824 191688127 -11397405 + AluJo SINE Alu 1 304 -8 25 83 0 0 chr5 191688293 191688353 -11397179 + AT_rich Low_complexity Low_complexity 1 60 0 822 162 0 0 chr5 191688474 191688653 -11396879 + (CA)n Simple_repeat Simple_repeat 2 180 0 4778 114 0 1 chr5 191688925 191689602 -11395930 + HERVH LTR ERV1 4474 5149 -2564 2531 133 16 14 chr5 191689619 191690055 -11395477 + HERVH LTR ERV1 7277 7713 0 1272 157 81 100 chr5 191690055 191690514 -11395018 + LTR7 LTR ERV1 1 450 0 2422 186 42 27 chr5 191690686 191691206 -11394326 + L1MB2 LINE L1 5476 6003 -168 530 250 0 22 chr5 191692017 191692153 -11393379 - MER94 DNA DNA 0 134 2 1019 153 28 37 chr5 191692364 191692579 -11392953 + L1MA3 LINE L1 6088 6300 -5 21 0 0 0 chr5 191693520 191693541 -11391991 + AT_rich Low_complexity Low_complexity 1 21 0 1240 243 159 52 chr5 191693790 191694349 -11391183 - L1MEc LINE L1 -5728 668 50 293 333 9 19 chr5 191694374 191694479 -11391053 - MER58 DNA MER1_type -236 105 2 569 216 78 18 chr5 191694480 191694583 -11390949 - L1MEc LINE L1 -4122 2274 2179 957 49 0 0 chr5 191694583 191694706 -11390826 - L1PA5 LINE L1 -2 6152 6030 569 216 78 18 chr5 191694706 191694820 -11390712 - L1MEc LINE L1 -4217 2179 2044 6552 113 2 3 chr5 191694820 191696574 -11388958 - L1PA8A LINE L1 -5 6126 4383 899 108 0 0 chr5 191697119 191697239 -11388293 + AluSq/x SINE Alu 1 120 -192 231 220 77 66 chr5 191698159 191698250 -11387282 - MIR SINE MIR -72 136 45 22 70 0 0 chr5 191698349 191698392 -11387140 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr5 191698428 191698450 -11387082 + AT_rich Low_complexity Low_complexity 1 22 0 192 248 9 18 chr5 191699010 191699119 -11386413 + A-rich Low_complexity Low_complexity 5 112 0 476 162 162 17 chr5 191699222 191699339 -11386193 + MER58B DNA MER1_type 207 340 -1 706 343 95 26 chr5 191699428 191699892 -11385640 + L2 LINE L2 1967 2462 -852 354 321 146 73 chr5 191700190 191700420 -11385112 + L2 LINE L2 2827 3039 -233 1570 168 31 62 chr5 191700420 191700741 -11384791 - AluJo SINE Alu -1 311 1 354 321 146 73 chr5 191700741 191700921 -11384611 + L2 LINE L2 3039 3267 -5 646 254 114 13 chr5 191701032 191701268 -11384264 - MIR SINE MIR -2 260 1 23 33 0 0 chr5 191701404 191701434 -11384098 + AT_rich Low_complexity Low_complexity 1 30 0 1616 183 84 0 chr5 191701683 191701994 -11383538 + MER1B DNA MER1_type 1 337 0 2612 198 13 29 chr5 191702278 191702898 -11382634 - L1P LINE L1 -1870 4276 3667 2897 126 37 45 chr5 191702898 191703565 -11381967 - L1P4 LINE L1 -380 5786 5117 2956 202 25 9 chr5 191703567 191704256 -11381276 + L1 LINE L1 3227 3926 -2220 9190 188 11 48 chr5 191704472 191706206 -11379326 - HERVH LTR ERV1 -3424 3105 1640 7396 36 3 1 chr5 191706206 191707818 -11377714 + L1PA4 LINE L1 4542 6155 0 9190 188 11 48 chr5 191707818 191708454 -11377078 - HERVH LTR ERV1 -4889 1640 982 202 274 111 59 chr5 191708803 191708956 -11376576 - MIR SINE MIR -13 249 89 304 259 0 12 chr5 191709286 191709367 -11376165 - MIR SINE MIR 0 262 183 211 407 62 0 chr5 191709852 191709965 -11375567 - L2 LINE L2 -2 3270 3151 820 166 0 35 chr5 191710018 191710163 -11375369 - AluSp/q SINE Alu -18 295 156 193 259 37 19 chr5 191710620 191710674 -11374858 - MIR3 SINE MIR -25 183 129 752 171 0 8 chr5 191711201 191711318 -11374214 + MER8 DNA MER2_type 1 116 -123 2189 121 79 9 chr5 191711318 191711658 -11373874 - THE1B LTR MaLR 0 364 1 11623 96 8 2 chr5 191711658 191713229 -11372303 - THE1B-int LTR MaLR 0 1580 1 251 175 0 0 chr5 191713229 191713269 -11372263 - THE1B LTR MaLR 0 355 316 42470 35 22 1 chr5 191713272 191719283 -11366249 + L1PA3 LINE L1 13 6152 -3 1160 266 105 20 chr5 191719305 191719801 -11365731 - L1MC/D LINE L1 -2010 5798 5261 2229 133 9 0 chr5 191719869 191720185 -11365347 + MER1B DNA MER1_type 1 319 -20 299 258 19 63 chr5 191720310 191720469 -11365063 - L1MC/D LINE L1 -1112 5034 4883 289 171 0 66 chr5 191720560 191720636 -11364896 - L1ME LINE L1 -253 5868 5798 815 259 72 17 chr5 191721457 191721861 -11363671 - MLT1J LTR MaLR -17 494 1 1294 163 0 53 chr5 191721931 191722176 -11363356 - MER46A DNA MER2_type 0 236 5 337 343 67 11 chr5 191722375 191722553 -11362979 - L2 LINE L2 0 3313 3126 1309 108 6 0 chr5 191722637 191722813 -11362719 + AluSq SINE Alu 1 177 -136 750 321 174 24 chr5 191722845 191723340 -11362192 - L2 LINE L2 -460 2854 2286 860 252 247 16 chr5 191723533 191723719 -11361813 - L2 LINE L2 -67 3246 3104 2392 165 21 16 chr5 191723719 191724150 -11361382 + Tigger2a DNA MER2_type 2 434 0 860 252 247 16 chr5 191724150 191724401 -11361131 - L2 LINE L2 -209 3104 2712 910 57 81 0 chr5 191724600 191724723 -11360809 - MER85 DNA T2_type -1 138 6 1844 226 18 15 chr5 191725079 191725473 -11360059 - MLT1F1 LTR MaLR 0 567 173 24 32 0 0 chr5 191725493 191725524 -11360008 + AT_rich Low_complexity Low_complexity 1 31 0 1650 148 39 0 chr5 191725733 191725990 -11359542 - Tigger3(Golem) DNA MER2_type -1 3028 2762 3223 91 11 9 chr5 191725997 191726448 -11359084 - L1PA10 LINE L1 0 6168 5717 233 67 0 0 chr5 191726475 191726505 -11359027 - Tigger3(Golem) DNA MER2_type -715 2314 2285 483 226 11 0 chr5 191726622 191726715 -11358817 - Tigger3(Golem) DNA MER2_type -2934 95 2 28 0 0 0 chr5 191727474 191727502 -11358030 + AT_rich Low_complexity Low_complexity 1 28 0 281 268 87 47 chr5 191727910 191728037 -11357495 + MIR3 SINE MIR 75 206 -2 23 33 0 0 chr5 191728446 191728476 -11357056 + AT_rich Low_complexity Low_complexity 1 30 0 940 253 49 29 chr5 191729963 191730084 -11355448 - L1ME1 LINE L1 -18 6542 6425 255 61 0 0 chr5 191730084 191730117 -11355415 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 940 253 49 29 chr5 191730117 191730303 -11355229 - L1ME1 LINE L1 -135 6425 6229 2250 80 3 17 chr5 191730472 191730773 -11354759 - AluSc SINE Alu -12 297 1 320 292 116 28 chr5 191730781 191731031 -11354501 - L1ME1 LINE L1 -1990 6212 5941 999 186 35 94 chr5 191731217 191731281 -11354251 - L1ME1 LINE L1 -743 5797 5731 2213 111 3 3 chr5 191731281 191731579 -11353953 - AluSq SINE Alu -9 304 7 999 186 35 94 chr5 191731579 191731691 -11353841 - L1ME1 LINE L1 -809 5731 5614 2058 84 4 15 chr5 191731691 191731965 -11353567 - AluSg SINE Alu -1 309 39 999 186 35 94 chr5 191731965 191732244 -11353288 - L1ME1 LINE L1 -926 5614 5445 463 233 45 23 chr5 191732278 191732340 -11353192 - L1ME1 LINE L1 -3996 2725 2666 1354 211 53 7 chr5 191732340 191732625 -11352907 - AluJo SINE Alu -14 298 1 463 233 45 23 chr5 191732625 191732738 -11352794 - L1ME1 LINE L1 -4055 2666 2546 5881 112 25 2 chr5 191732741 191734410 -11351122 - L1PA15 LINE L1 0 6165 4470 261 210 85 100 chr5 191734414 191734614 -11350918 - L1ME1 LINE L1 -4073 2467 2271 1389 157 133 0 chr5 191734716 191734964 -11350568 + AluJo SINE Alu 12 292 -20 1094 252 76 56 chr5 191734968 191735507 -11350025 - L1ME1 LINE L1 -4423 2117 1568 4926 205 46 41 chr5 191735510 191737124 -11348408 - L1MB5 LINE L1 -8 6166 4561 2076 130 3 0 chr5 191737124 191737417 -11348115 - AluSq SINE Alu -19 294 1 4926 205 46 41 chr5 191737417 191737499 -11348033 - L1MB5 LINE L1 -1613 4561 4481 1188 168 29 0 chr5 191737499 191737707 -11347825 - L1PA16 LINE L1 -4 6162 5949 4926 205 46 41 chr5 191737707 191738143 -11347389 - L1MB5 LINE L1 -1693 4481 4023 816 257 60 3 chr5 191738143 191738176 -11347356 - L1MB5 LINE L1 -3631 2515 2485 360 0 0 0 chr5 191738176 191738216 -11347316 + (TA)n Simple_repeat Simple_repeat 2 41 0 816 257 60 3 chr5 191738216 191738466 -11347066 - L1MB5 LINE L1 -3661 2485 2216 3540 128 7 7 chr5 191738520 191739068 -11346464 - MER41B LTR ERV1 -86 549 2 15971 112 16 16 chr5 191739069 191741559 -11343973 - MER41B-int LTR ERV1 0 5946 3459 878 264 77 75 chr5 191741559 191741899 -11343633 - L1MC4a LINE L1 -1792 6016 5673 1772 164 41 22 chr5 191741899 191742265 -11343267 - THE1C LTR MaLR -2 373 1 878 264 77 75 chr5 191742265 191742446 -11343086 - L1MC4a LINE L1 -2135 5673 5494 42449 35 1 2 chr5 191742460 191748606 -11336926 - L1PA3 LINE L1 -3 6152 9 519 219 5 65 chr5 191748615 191748789 -11336743 - L1MC4a LINE L1 -2314 5494 5332 1664 173 0 73 chr5 191748789 191749119 -11336413 - AluJb SINE Alu -6 306 1 519 219 5 65 chr5 191749119 191749145 -11336387 - L1MC4a LINE L1 -2476 5332 5306 304 284 7 0 chr5 191749398 191749532 -11336000 - L1M4 LINE L1 -1099 5047 4914 1922 147 0 42 chr5 191749532 191749885 -11335647 - MER1B DNA MER1_type 0 339 2 260 303 20 7 chr5 191749923 191750075 -11335457 - L1M4 LINE L1 -1258 4888 4735 2137 136 0 3 chr5 191750158 191750460 -11335072 - AluSx SINE Alu -11 301 1 3625 135 2 7 chr5 191750502 191751104 -11334428 - L1MA8 LINE L1 -173 6118 5520 476 252 0 0 chr5 191751135 191751246 -11334286 + L1M4c LINE L1 1682 1792 -4592 3745 210 117 54 chr5 191751264 191752868 -11332664 - L1M4c LINE L1 -3965 2681 979 1835 142 18 18 chr5 191752868 191753188 -11332344 - AluSx SINE Alu 0 320 1 3745 210 117 54 chr5 191753188 191753273 -11332259 - L1M4c LINE L1 -5667 979 901 361 310 26 0 chr5 191753282 191753395 -11332137 - L1M4c LINE L1 -5612 930 815 459 293 102 21 chr5 191753529 191753812 -11331720 - L1M4c LINE L1 -6044 602 297 1389 109 153 0 chr5 191753869 191754117 -11331415 + MER47A DNA MER2_type 81 366 0 198 298 0 60 chr5 191754480 191754564 -11330968 - MIR3 SINE MIR -15 193 115 466 310 94 8 chr5 191755163 191755556 -11329976 - L1ME LINE L1 -305 5816 5390 * 2190 219 22 63 chr5 191755555 191756332 -11329200 + L1MC4a LINE L1 4537 5281 -865 1175 232 0 11 chr5 191756470 191756733 -11328799 + MLT1D LTR MaLR 246 505 0 2339 233 165 87 chr5 191756735 191758472 -11327060 + L1MC4a LINE L1 5296 7308 -500 279 232 98 0 chr5 191758472 191758554 -11326978 + MLT1K LTR MaLR 36 125 -442 2339 233 165 87 chr5 191758554 191759097 -11326435 + L1MC4a LINE L1 7308 7807 -1 299 276 145 40 chr5 191759410 191759476 -11326056 - MIR SINE MIR -88 174 116 892 70 70 0 chr5 191759476 191759605 -11325927 + MER85 DNA T2_type 1 138 -1 299 276 145 40 chr5 191759605 191759690 -11325842 - MIR SINE MIR -146 116 7 1540 164 42 31 chr5 191759839 191760138 -11325394 + L1MB8 LINE L1 5815 6120 -58 2100 119 10 7 chr5 191760138 191760441 -11325091 + AluSx SINE Alu 1 304 -8 1540 164 42 31 chr5 191760441 191760501 -11325031 + L1MB8 LINE L1 6120 6178 0 243 148 66 16 chr5 191760526 191760587 -11324945 + L1MC5 LINE L1 5673 5736 -2072 880 208 132 110 chr5 191760903 191761524 -11324008 + L1MC5 LINE L1 6636 7277 -684 2323 75 0 3 chr5 191761524 191761819 -11323713 + AluY SINE Alu 2 295 -16 880 208 132 110 chr5 191761819 191761932 -11323600 + L1MC5 LINE L1 7277 7386 -575 10254 130 32 20 chr5 191762198 191762586 -11322946 + Tigger1 DNA MER2_type 582 964 -1454 1866 126 24 90 chr5 191762586 191762920 -11322612 - AluSx SINE Alu 0 312 1 10254 130 32 20 chr5 191762920 191764344 -11321188 + Tigger1 DNA MER2_type 964 2416 -2 369 285 78 36 chr5 191764346 191764539 -11320993 + MLT1K LTR MaLR 273 473 -115 311 44 22 0 chr5 191764692 191764737 -11320795 + (CA)n Simple_repeat Simple_repeat 2 47 0 256 336 164 15 chr5 191765474 191765608 -11319924 - MIR SINE MIR -96 166 13 434 292 15 22 chr5 191767016 191767153 -11318379 + MIR3 SINE MIR 19 154 -54 1785 196 25 3 chr5 191767621 191767978 -11317554 + MLT1A1 LTR MaLR 1 365 0 481 252 23 38 chr5 191767982 191768112 -11317420 - MER8 DNA MER2_type 0 239 112 1823 134 83 10 chr5 191768112 191768425 -11317107 + THE1B LTR MaLR 1 336 -28 40552 34 22 1 chr5 191768425 191774437 -11311095 - L1PA2 LINE L1 -1 6154 13 237 175 0 0 chr5 191774440 191774480 -11311052 + THE1B LTR MaLR 316 355 0 11645 96 9 2 chr5 191774480 191776049 -11309483 + THE1B-int LTR MaLR 1 1580 0 2196 121 79 9 chr5 191776049 191776389 -11309143 + THE1B LTR MaLR 1 364 0 707 171 0 8 chr5 191776389 191776506 -11309026 - MER8 DNA MER2_type -123 116 1 191 259 37 19 chr5 191777033 191777087 -11308445 + MIR3 SINE MIR 129 183 -25 835 171 0 27 chr5 191777544 191777690 -11307842 + AluSp/q SINE Alu 156 297 -16 207 407 62 0 chr5 191777743 191777856 -11307676 + L2 LINE L2 3151 3270 -2 304 259 0 12 chr5 191778341 191778422 -11307110 + MIR SINE MIR 183 262 0 199 274 111 59 chr5 191778752 191778905 -11306627 + MIR SINE MIR 89 249 -13 951 186 16 18 chr5 191779321 191779638 -11305894 + MSTD LTR MaLR 2 394 -2 233 308 28 28 chr5 191780068 191780175 -11305357 + MIR SINE MIR 85 191 -71 1850 153 80 49 chr5 191780180 191780605 -11304927 - Tigger2 DNA MER2_type -1 2717 2280 427 159 0 0 chr5 191780603 191780672 -11304860 - Tigger2 DNA MER2_type -2649 69 1 * 273 310 46 0 chr5 191781996 191782083 -11303449 - MIR SINE MIR -109 153 63 414 0 0 0 chr5 191782103 191782149 -11303383 + (TTA)n Simple_repeat Simple_repeat 3 48 0 28677 104 13 21 chr5 191782149 191788496 -11297036 - L1PA7 LINE L1 -18 6451 44 2151 118 3 6 chr5 191788496 191788809 -11296723 - AluSp SINE Alu -1 312 1 567 273 113 43 chr5 191789077 191789308 -11296224 + MIR SINE MIR 11 257 -5 2848 7 0 0 chr5 191789573 191789880 -11295652 + AluYa5 SINE Alu 1 307 -4 1669 161 3 70 chr5 191789893 191790209 -11295323 + AluJo SINE Alu 6 300 -12 225 223 0 126 chr5 191790764 191790867 -11294665 - L2 LINE L2 -243 3029 2940 197 222 0 37 chr5 191791164 191791218 -11294314 + MER5B DNA MER1_type 4 55 -123 411 299 13 52 chr5 191791394 191791504 -11294028 + MER5B DNA MER1_type 26 130 -48 207 0 0 0 chr5 191791504 191791527 -11294005 + (TTG)n Simple_repeat Simple_repeat 2 24 0 411 299 13 52 chr5 191791527 191791570 -11293962 + MER5B DNA MER1_type 130 173 -5 287 253 108 12 chr5 191791599 191791682 -11293850 - MIR SINE MIR -109 153 63 1674 193 3 0 chr5 191792887 191793187 -11292345 - AluJo SINE Alu -9 303 3 1945 155 16 0 chr5 191793955 191794264 -11291268 + MER2 DNA MER2_type 1 314 -31 311 228 123 29 chr5 191794276 191794447 -11291085 + L1ME4a LINE L1 5719 5905 -216 306 239 125 0 chr5 191794473 191794561 -11290971 + L1ME4a LINE L1 5969 6067 -54 595 236 45 56 chr5 191794604 191794782 -11290750 + MIR SINE MIR 23 198 -64 1996 205 60 38 chr5 191794985 191795341 -11290191 - MER34 LTR ERV1 0 542 170 1774 19 5 0 chr5 191795341 191795551 -11289981 - L1PA2 LINE L1 -2 6153 5943 1996 205 60 38 chr5 191795551 191795715 -11289817 - MER34 LTR ERV1 -372 170 11 257 431 31 0 chr5 191796304 191796434 -11289098 + L2 LINE L2 3119 3252 -20 258 297 41 24 chr5 191797380 191797528 -11288004 + MIR SINE MIR 59 256 -6 753 298 55 9 chr5 191797987 191798205 -11287327 - MIR SINE MIR -26 236 9 1728 191 139 21 chr5 191798205 191798672 -11286860 + Charlie1b DNA MER1_type 1 522 -1 240 242 113 16 chr5 191799209 191799271 -11286261 - L2 LINE L2 -5 3267 3200 1561 197 45 0 chr5 191799308 191799598 -11285934 + AluJb SINE Alu 1 303 -9 7663 144 88 31 chr5 191801017 191801965 -11283567 - L1MA5A LINE L1 -4 6935 6042 2116 115 20 7 chr5 191801965 191802269 -11283263 - AluSg SINE Alu -2 308 1 7663 144 88 31 chr5 191802269 191802306 -11283226 - L1MA5A LINE L1 -897 6042 6009 371 21 21 0 chr5 191802306 191802354 -11283178 + (TTG)n Simple_repeat Simple_repeat 3 51 0 7663 144 88 31 chr5 191802354 191803994 -11281538 - L1MA5A LINE L1 -930 6009 4145 891 179 6 0 chr5 191803987 191804143 -11281389 - L1 LINE L1 -2010 5555 5399 * 1873 158 306 57 chr5 191804139 191804237 -11281295 - L1 LINE L1 -5563 2002 1930 2336 86 10 0 chr5 191804237 191804538 -11280994 + AluSp SINE Alu 1 304 -9 1873 158 306 57 chr5 191804538 191804933 -11280599 - L1 LINE L1 -5635 1930 1386 5330 230 32 30 chr5 191804935 191806820 -11278712 - L1MA5A LINE L1 -4810 1979 8 8318 220 102 31 chr5 191806859 191809517 -11276015 + L1MA4A LINE L1 2 2472 -4376 2216 117 0 7 chr5 191809517 191809826 -11275706 + AluSx SINE Alu 1 307 -5 8318 220 102 31 chr5 191809826 191810299 -11275233 + L1MA4A LINE L1 2472 2910 -3938 2318 89 10 0 chr5 191810299 191810592 -11274940 - AluSg SINE Alu -14 296 1 8318 220 102 31 chr5 191810592 191811927 -11273605 + L1MA4A LINE L1 2910 4791 -2057 5190 154 35 25 chr5 191811925 191812382 -11273150 + L1MA4A LINE L1 5898 6349 -656 * 2401 65 7 0 chr5 191812382 191812673 -11272859 + AluY SINE Alu 1 293 -18 5190 154 35 25 chr5 191812673 191813315 -11272217 + L1MA4A LINE L1 6349 7005 0 1932 91 4 0 chr5 191814936 191815190 -11270342 - AluSp SINE Alu -5 308 54 471 299 87 16 chr5 191815529 191815713 -11269819 + MIR SINE MIR 19 215 -47 21 0 0 0 chr5 191816587 191816608 -11268924 + AT_rich Low_complexity Low_complexity 1 21 0 355 130 26 13 chr5 191816756 191816833 -11268699 + GA-rich Low_complexity Low_complexity 1 78 0 1863 174 3 0 chr5 191816945 191817239 -11268293 + AluJo SINE Alu 1 295 -17 2352 74 7 0 chr5 191817391 191817688 -11267844 - AluSq SINE Alu -14 299 1 25 0 0 0 chr5 191818014 191818039 -11267493 + AT_rich Low_complexity Low_complexity 1 25 0 1510 174 0 8 chr5 191819185 191819444 -11266088 + AluJb SINE Alu 44 300 -12 2142 108 3 38 chr5 191819491 191819805 -11265727 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr5 191820176 191820198 -11265334 + AT_rich Low_complexity Low_complexity 1 22 0 216 135 0 0 chr5 191820900 191820937 -11264595 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 23 0 0 0 chr5 191821536 191821559 -11263973 + AT_rich Low_complexity Low_complexity 1 23 0 185 348 58 0 chr5 191821706 191821775 -11263757 + MIR3 SINE MIR 130 202 -6 627 26 0 0 chr5 191822077 191822154 -11263378 + (TG)n Simple_repeat Simple_repeat 2 78 0 189 0 0 0 chr5 191822465 191822486 -11263046 + (TA)n Simple_repeat Simple_repeat 1 21 0 252 323 50 20 chr5 191822549 191822648 -11262884 + MIR3 SINE MIR 98 199 -9 511 298 101 25 chr5 191822662 191823028 -11262504 + L1MCc LINE L1 11 404 -6019 674 156 21 28 chr5 191823186 191823304 -11262228 + L1MD3 LINE L1 7856 7974 -21 1548 206 0 29 chr5 191823304 191823620 -11261912 + AluJo SINE Alu 1 307 -5 674 156 21 28 chr5 191823620 191823642 -11261890 + L1MD3 LINE L1 7974 7995 0 21 0 0 0 chr5 191823787 191823808 -11261724 + AT_rich Low_complexity Low_complexity 1 21 0 207 213 21 21 chr5 191823961 191824008 -11261524 + L2 LINE L2 3262 3308 -5 * 650 317 76 77 chr5 191824005 191824861 -11260671 + L2 LINE L2 2376 3236 -36 468 232 99 14 chr5 191825142 191825284 -11260248 + L1ME1 LINE L1 5979 6132 -34 2091 85 0 79 chr5 191825829 191826157 -11259375 + AluY SINE Alu 1 302 -9 256 327 195 13 chr5 191827235 191827394 -11258138 - MIR SINE MIR -24 238 51 238 274 32 0 chr5 191828037 191828099 -11257433 - MIR SINE MIR -58 150 87 432 378 97 19 chr5 191828180 191828439 -11257093 - L2 LINE L2 -91 3181 2903 1811 164 10 22 chr5 191828597 191828908 -11256624 + AluJb SINE Alu 3 309 -3 533 305 55 10 chr5 191831901 191832101 -11253431 - MIR SINE MIR -14 248 40 471 323 118 10 chr5 191832412 191832607 -11252925 + MIR SINE MIR 4 219 -43 838 211 82 0 chr5 191832617 191832788 -11252744 + MER20 DNA MER1_type 33 217 -2 378 0 0 0 chr5 191832913 191832955 -11252577 + (TG)n Simple_repeat Simple_repeat 1 42 0 2331 103 0 6 chr5 191832975 191833287 -11252245 - AluSg SINE Alu 0 310 1 5762 29 1 5 chr5 191833335 191833982 -11251550 + SVA Other Other 742 1386 0 540 227 24 193 chr5 191834233 191834528 -11251004 + MIR SINE MIR 15 259 -3 22 0 0 0 chr5 191835838 191835860 -11249672 + AT_rich Low_complexity Low_complexity 1 22 0 438 340 96 0 chr5 191836096 191836293 -11249239 - MIR SINE MIR 0 262 47 2160 82 13 40 chr5 191837700 191838004 -11247528 + AluSx SINE Alu 1 296 -16 322 293 177 40 chr5 191838342 191838540 -11246992 - MIR SINE MIR -12 250 26 1889 103 80 0 chr5 191839338 191839627 -11245905 + AluSp SINE Alu 1 310 0 2119 119 0 10 chr5 191839858 191840152 -11245380 - AluSx SINE Alu -21 291 1 2015 90 0 30 chr5 191840432 191840732 -11244800 + AluSx SINE Alu 10 300 -12 348 188 0 0 chr5 191840732 191840801 -11244731 + (TA)n Simple_repeat Simple_repeat 2 70 0 21 36 0 0 chr5 191840906 191840934 -11244598 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 191842039 191842074 -11243458 + AT_rich Low_complexity Low_complexity 1 35 0 2342 84 16 7 chr5 191845276 191845584 -11239948 + AluY SINE Alu 1 311 0 696 280 110 8 chr5 191846042 191846278 -11239254 - MIR SINE MIR 0 262 3 2045 96 26 26 chr5 191846426 191846728 -11238804 - AluSx SINE Alu -10 302 1 429 278 143 57 chr5 191850727 191850812 -11234720 - MIR SINE MIR -6 256 180 2152 109 17 3 chr5 191850812 191851114 -11234418 - AluSx SINE Alu -6 306 1 429 278 143 57 chr5 191851114 191851258 -11234274 - MIR SINE MIR -82 180 7 201 200 0 22 chr5 191851735 191851780 -11233752 - L2 LINE L2 -78 3235 3192 272 308 133 72 chr5 191853694 191854071 -11231461 - L2 LINE L2 -40 3232 2833 267 133 0 0 chr5 191854459 191854504 -11231028 + (TC)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr5 191855595 191855630 -11229902 + AT_rich Low_complexity Low_complexity 1 35 0 207 195 0 0 chr5 191855844 191855885 -11229647 + T-rich Low_complexity Low_complexity 3 43 0 27 0 0 0 chr5 191855918 191855945 -11229587 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr5 191857015 191857036 -11228496 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 191858006 191858028 -11227504 + AT_rich Low_complexity Low_complexity 1 22 0 34 24 0 0 chr5 191859023 191859064 -11226468 + AT_rich Low_complexity Low_complexity 1 41 0 646 202 79 17 chr5 191859315 191859493 -11226039 - MER5A DNA MER1_type 0 189 1 378 0 0 0 chr5 191860388 191860430 -11225102 + (TG)n Simple_repeat Simple_repeat 2 43 0 5300 49 22 1 chr5 191860442 191861114 -11224418 - L1PA7 LINE L1 -3 6151 5466 1464 41 23 0 chr5 191861115 191861372 -11224160 + L1PA7 LINE L1 5185 5447 -725 771 244 6 17 chr5 191861512 191861692 -11223840 - MER45A DNA AcHobo 0 178 1 279 258 208 25 chr5 191862072 191862192 -11223340 - L2 LINE L2 -2 3311 3170 7244 44 0 2 chr5 191863657 191864821 -11220711 - L1PA7 LINE L1 0 6154 4991 228 122 0 0 chr5 191864984 191865025 -11220507 + (TG)n Simple_repeat Simple_repeat 2 42 0 338 228 121 27 chr5 191865288 191865437 -11220095 + MER104 DNA Tc2 14 176 -4 207 315 11 54 chr5 191865925 191866017 -11219515 + MIR SINE MIR 5 92 -170 1774 116 11 14 chr5 191866833 191867108 -11218424 + AluSx SINE Alu 30 303 -9 23 33 0 0 chr5 191867340 191867370 -11218162 + AT_rich Low_complexity Low_complexity 1 30 0 280 333 56 33 chr5 191867505 191867674 -11217858 - MIR SINE MIR -62 146 15 735 318 89 4 chr5 191868049 191868285 -11217247 + MIR SINE MIR 1 256 -6 475 287 73 17 chr5 191869321 191869610 -11215922 + L1ME4a LINE L1 5612 5916 -205 3673 140 41 14 chr5 191869674 191870331 -11215201 + L1MA8 LINE L1 5554 6228 -63 5820 125 26 13 chr5 191870332 191870516 -11215016 - Tigger1 DNA MER2_type -6 2412 2232 2283 104 3 3 chr5 191870516 191870823 -11214709 + AluSq SINE Alu 1 307 -6 5820 125 26 13 chr5 191870823 191871573 -11213959 - Tigger1 DNA MER2_type -186 2232 1466 * 7705 129 34 30 chr5 191871562 191872160 -11213372 - Tigger1 DNA MER2_type -1115 1303 709 2489 7 0 0 chr5 191872160 191872431 -11213101 - AluYa5 SINE Alu -2 309 39 7705 129 34 30 chr5 191872431 191873130 -11212402 - Tigger1 DNA MER2_type -1709 709 1 28 61 0 0 chr5 191873158 191873207 -11212325 + AT_rich Low_complexity Low_complexity 1 49 0 199 233 0 0 chr5 191874912 191874955 -11210577 + L2 LINE L2 3263 3305 -8 314 260 130 0 chr5 191875186 191875286 -11210246 + L2 LINE L2 3158 3270 -2 22 88 0 0 chr5 191877023 191877080 -11208452 + AT_rich Low_complexity Low_complexity 1 57 0 262 243 9 81 chr5 191877118 191877173 -11208359 - MIR SINE MIR -91 171 126 2489 59 3 0 chr5 191877173 191877476 -11208056 + AluY SINE Alu 1 304 -7 262 243 9 81 chr5 191877476 191877531 -11208001 - MIR SINE MIR -136 126 69 402 259 76 23 chr5 191878306 191878437 -11207095 + MIR SINE MIR 115 252 -10 1746 195 112 31 chr5 191879247 191879704 -11205828 - MLT1D LTR MaLR 0 505 12 3203 158 25 18 chr5 191879973 191880574 -11204958 - L1MB7 LINE L1 -30 6154 5550 505 308 118 14 chr5 191881460 191881671 -11203861 + MIR SINE MIR 20 252 -10 817 235 84 39 chr5 191881733 191882018 -11203514 - L2 LINE L2 0 3313 3016 452 327 33 13 chr5 191882434 191882584 -11202948 - MIR SINE MIR -69 193 41 742 204 8 0 chr5 191882584 191882716 -11202816 - FLAM_A SINE Alu 0 133 1 449 257 71 14 chr5 191883088 191883228 -11202304 - MIR SINE MIR -54 208 61 2350 66 0 3 chr5 191883520 191883806 -11201726 + AluY SINE Alu 1 285 -26 215 257 167 35 chr5 191883897 191884041 -11201491 - MIR SINE MIR -64 198 36 934 214 16 0 chr5 191884285 191884467 -11201065 - MER5A DNA MER1_type 0 189 5 244 292 56 22 chr5 191884533 191884622 -11200910 + MIR SINE MIR 51 142 -120 23 0 0 0 chr5 191889443 191889466 -11196066 + AT_rich Low_complexity Low_complexity 1 23 0 383 323 144 10 chr5 191890528 191890723 -11194809 - MIR SINE MIR -10 252 32 566 262 102 22 chr5 191891956 191892181 -11193351 + MIR SINE MIR 20 262 0 22 35 0 0 chr5 191892507 191892536 -11192996 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 191892550 191892571 -11192961 + AT_rich Low_complexity Low_complexity 1 21 0 775 108 7 72 chr5 191892759 191892898 -11192634 - FLAM_A SINE Alu -3 130 1 28 91 0 0 chr5 191893579 191893656 -11191876 + AT_rich Low_complexity Low_complexity 1 77 0 671 298 53 20 chr5 191894415 191894660 -11190872 + MIR SINE MIR 1 253 -9 284 292 148 28 chr5 191895273 191895566 -11189966 - L2 LINE L2 -49 3264 2927 270 176 0 0 chr5 191895696 191895747 -11189785 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 240 342 0 94 chr5 191896431 191896488 -11189044 + L2 LINE L2 3134 3176 -96 2324 95 7 0 chr5 191896488 191896783 -11188749 + AluSc SINE Alu 1 297 -12 240 342 0 94 chr5 191896783 191896842 -11188690 + L2 LINE L2 3176 3239 -33 364 298 99 21 chr5 191896995 191897033 -11188499 + L2 LINE L2 3094 3128 -185 2270 110 0 0 chr5 191897033 191897325 -11188207 - AluSx SINE Alu -20 292 1 364 298 99 21 chr5 191897325 191897477 -11188055 + L2 LINE L2 3128 3299 -14 244 354 12 0 chr5 191897890 191897972 -11187560 - L2 LINE L2 -209 3063 2981 203 371 35 91 chr5 191897968 191898200 -11187332 - L2 LINE L2 -81 3191 2973 * 232 365 37 0 chr5 191898268 191898375 -11187157 - L2 LINE L2 -453 2861 2751 25 31 0 0 chr5 191898943 191898975 -11186557 + AT_rich Low_complexity Low_complexity 1 32 0 219 284 14 14 chr5 191899827 191899901 -11185631 - MIR3 SINE MIR -13 195 122 30273 107 13 13 chr5 191900651 191906122 -11179410 - L1PA8 LINE L1 -3 6169 694 477 143 0 12 chr5 191906111 191906195 -11179337 - L1PA8 LINE L1 -6062 84 2 * 2287 123 3 0 chr5 191906201 191906510 -11179022 - AluSx SINE Alu -2 310 1 238 267 86 48 chr5 191907769 191907874 -11177658 + L3 LINE CR1 321 429 -1148 2026 125 7 14 chr5 191908394 191908691 -11176841 - AluSx SINE Alu -17 295 1 2386 95 0 3 chr5 191909114 191909420 -11176112 + AluSq SINE Alu 1 305 -8 335 287 35 83 chr5 191909570 191909800 -11175732 + MIR SINE MIR 1 219 -43 219 278 0 28 chr5 191910384 191910456 -11175076 + GA-rich Low_complexity Low_complexity 1 70 0 420 234 99 14 chr5 191910660 191910801 -11174731 + MIR SINE MIR 68 220 -42 313 298 11 11 chr5 191910822 191910916 -11174616 - MIR SINE MIR -131 131 38 630 190 91 0 chr5 191912614 191912735 -11172797 + Tigger1 DNA MER2_type 24 155 -2263 * 13976 108 40 5 chr5 191912732 191914784 -11170748 + Tigger1 DNA MER2_type 295 2417 -1 2275 98 19 3 chr5 191915155 191915462 -11170070 - AluSx SINE Alu 0 312 1 180 111 0 0 chr5 191915521 191915548 -11169984 + (A)n Simple_repeat Simple_repeat 1 27 0 2418 83 3 0 chr5 191915553 191915853 -11169679 + AluSp SINE Alu 3 303 -10 184 305 29 167 chr5 191915857 191916031 -11169501 - L2 LINE L2 -90 3182 3033 2176 104 7 3 chr5 191916246 191916533 -11168999 + AluSx SINE Alu 1 288 -24 1691 158 3 40 chr5 191916693 191917016 -11168516 - AluJo SINE Alu -1 311 1 349 274 17 68 chr5 191917530 191917822 -11167710 + L1ME4a LINE L1 5600 5876 -245 415 287 104 11 chr5 191918443 191918711 -11166821 - L1MC4a LINE L1 -154 5967 5675 232 281 122 0 chr5 191918720 191918802 -11166730 - L2 LINE L2 -2 3311 3220 852 158 22 14 chr5 191918828 191918967 -11166565 + FLAM_C SINE Alu 3 142 -1 4634 148 38 15 chr5 191919037 191919830 -11165702 + L1MC1 LINE L1 5510 6320 -13 3325 257 165 46 chr5 191919885 191921337 -11164195 - L2 LINE L2 -251 3062 1438 1674 186 36 0 chr5 191921382 191921661 -11163871 - AluJb SINE Alu -23 289 1 289 240 93 47 chr5 191921661 191921790 -11163742 - L1MC4a LINE L1 -516 5605 5471 595 261 117 26 chr5 191922446 191922676 -11162856 - MIR SINE MIR -11 251 1 22 0 0 0 chr5 191922829 191922851 -11162681 + AT_rich Low_complexity Low_complexity 1 22 0 296 258 47 31 chr5 191923171 191923299 -11162233 - MER117 DNA MER1_type -1 196 67 942 85 78 0 chr5 191923935 191924064 -11161468 - MER85 DNA T2_type 0 139 1 248 305 127 97 chr5 191924492 191924853 -11160679 + L2 LINE L2 2897 3268 -4 2182 241 52 63 chr5 191925187 191925822 -11159710 - MLT2E LTR ERVL 0 628 1 502 189 24 39 chr5 191926352 191926479 -11159053 - L1ME3 LINE L1 -1 6161 6037 27 62 0 0 chr5 191926537 191926585 -11158947 + AT_rich Low_complexity Low_complexity 1 48 0 510 307 39 17 chr5 191927556 191927735 -11157797 - MER5A DNA MER1_type 0 189 7 815 203 0 0 chr5 191927757 191927890 -11157642 - FLAM_A SINE Alu 0 133 1 3083 218 29 15 chr5 191928787 191929502 -11156030 - L1ME1 LINE L1 -5 6230 5506 240 200 0 0 chr5 191929499 191929549 -11155983 - L1ME1 LINE L1 -5267 1129 1080 * 2086 92 7 46 chr5 191929560 191929863 -11155669 + AluSq SINE Alu 1 291 -22 1682 126 60 15 chr5 191929877 191930146 -11155386 + AluSq SINE Alu 1 281 -32 1702 276 8 34 chr5 191935585 191935945 -11149587 - L1M2 LINE L1 -6356 493 148 2552 56 0 3 chr5 191935945 191936247 -11149285 - AluY SINE Alu -10 301 1 1702 276 8 34 chr5 191936247 191936382 -11149150 - L1M2 LINE L1 -6701 148 11 619 288 5 37 chr5 191936399 191936614 -11148918 + L2 LINE L2 3106 3313 0 434 236 0 45 chr5 191937173 191937283 -11148249 + MIR SINE MIR 50 154 -108 345 283 189 0 chr5 191937287 191937393 -11148139 - L2 LINE L2 0 3272 3147 297 219 53 24 chr5 191937516 191937599 -11147933 - MIR SINE MIR -110 98 2 907 295 104 37 chr5 191937793 191938151 -11147381 + L1MEc LINE L1 73 473 -5923 2397 92 0 7 chr5 191938151 191938454 -11147078 + AluSx SINE Alu 1 301 -11 907 295 104 37 chr5 191938454 191938576 -11146956 + L1MEc LINE L1 473 585 -5811 514 224 98 92 chr5 191938642 191938718 -11146814 + L1MEc LINE L1 683 757 -5639 2216 112 3 0 chr5 191938718 191939013 -11146519 + AluSp SINE Alu 1 296 -17 514 224 98 92 chr5 191939013 191939192 -11146340 + L1MEc LINE L1 757 943 -5453 2341 74 0 14 chr5 191939192 191939488 -11146044 - AluY SINE Alu -19 292 1 514 224 98 92 chr5 191939488 191939557 -11145975 + L1MEc LINE L1 943 1010 -5386 6497 221 14 21 chr5 191939665 191941342 -11144190 + HERVH LTR ERV1 2614 4298 -2297 387 135 84 62 chr5 191941381 191941488 -11144044 + LTR7 LTR ERV1 90 214 -236 478 76 0 119 chr5 191941683 191941801 -11143731 + LTR7 LTR ERV1 347 450 0 2252 158 34 25 chr5 191941995 191942439 -11143093 + LTR7 LTR ERV1 1 448 -2 1913 106 16 0 chr5 191942439 191942695 -11142837 + AluSx SINE Alu 35 294 -18 1636 138 21 3 chr5 191942949 191943232 -11142300 - HERVH LTR ERV1 -7425 288 1 1484 162 101 82 chr5 191943236 191943469 -11142063 - LTR7 LTR ERV1 -2 448 202 2361 63 0 13 chr5 191943469 191943771 -11141761 - AluY SINE Alu -13 298 1 1484 162 101 82 chr5 191943771 191943975 -11141557 - LTR7 LTR ERV1 -248 202 3 353 250 0 0 chr5 191944382 191944462 -11141070 - L1MB8 LINE L1 -6 6172 6093 2249 74 0 11 chr5 191944470 191944790 -11140742 - AluY SINE Alu 0 317 1 1104 169 63 10 chr5 191944790 191944997 -11140535 - AluJb SINE Alu -13 299 82 235 77 26 0 chr5 191945234 191945273 -11140259 - MER7A DNA MER2_type -249 97 60 2233 100 3 7 chr5 191945273 191945574 -11139958 + AluSx SINE Alu 1 300 -12 1310 106 0 20 chr5 191945388 191945576 -11139956 + AluSg/x SINE Alu 114 299 -10 2246 47 38 63 chr5 191945576 191945895 -11139637 + AluY SINE Alu 1 311 0 662 130 9 28 chr5 191945912 191946020 -11139512 + AluSq SINE Alu 122 227 -86 180 0 0 0 chr5 191946022 191946042 -11139490 + (A)n Simple_repeat Simple_repeat 1 20 0 381 229 0 0 chr5 191946042 191946112 -11139420 - MER7A DNA MER2_type -278 70 1 204 125 0 0 chr5 191946345 191946377 -11139155 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 * 287 243 75 47 chr5 191946365 191946472 -11139060 - L2 LINE L2 0 3313 3204 424 297 49 20 chr5 191946754 191947000 -11138532 - L2 LINE L2 -378 2936 2684 2448 57 7 0 chr5 191947303 191947602 -11137930 - AluY SINE Alu -10 301 1 286 270 92 11 chr5 191947700 191947873 -11137659 + MIR SINE MIR 64 245 -17 1934 120 17 7 chr5 191947985 191948284 -11137248 - AluSx SINE Alu -10 302 1 940 220 38 0 chr5 191948486 191948695 -11136837 + MER7A DNA MER2_type 121 337 -9 22 0 0 0 chr5 191948714 191948736 -11136796 + AT_rich Low_complexity Low_complexity 1 22 0 2308 76 0 19 chr5 191948747 191949062 -11136470 + AluY SINE Alu 1 309 -2 2034 114 14 0 chr5 191949071 191949388 -11136144 + AluSx SINE Alu 1 321 0 1053 157 0 0 chr5 191949388 191949554 -11135978 + AluSq SINE Alu 132 297 -16 1843 161 4 0 chr5 191949554 191949834 -11135698 - AluJo SINE Alu -31 281 1 1177 119 0 0 chr5 191949958 191950117 -11135415 + FRAM SINE Alu 1 158 -18 187 237 0 0 chr5 191950452 191950490 -11135042 - MIR SINE MIR -119 143 106 2397 45 3 22 chr5 191950963 191951274 -11134258 - AluY SINE Alu -6 305 1 351 342 126 22 chr5 191951309 191951715 -11133817 - L1ME4a LINE L1 0 6121 5685 2356 54 10 0 chr5 191951715 191952010 -11133522 - AluY SINE Alu -13 298 1 351 342 126 22 chr5 191952010 191952025 -11133507 - L1ME4a LINE L1 -436 5685 5673 865 138 0 0 chr5 191953614 191953744 -11131788 + FLAM_C SINE Alu 1 130 -3 2240 97 0 0 chr5 191953750 191954048 -11131484 + AluY SINE Alu 1 298 -13 2247 97 0 0 chr5 191954050 191954340 -11131192 + AluSx SINE Alu 1 290 -22 222 37 0 0 chr5 191954349 191954376 -11131156 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 237 158 0 0 chr5 191954422 191954460 -11131072 + MIR SINE MIR 110 147 -61 2104 54 65 37 chr5 191955577 191955871 -11129661 + AluY SINE Alu 1 302 -9 1701 168 7 23 chr5 191955874 191956177 -11129355 + AluSx SINE Alu 1 298 -14 631 189 0 0 chr5 191956179 191956290 -11129242 - AluJo/FLAM SINE Alu -201 111 1 2385 74 0 16 chr5 191956297 191956609 -11128923 - AluY SINE Alu -4 307 1 321 282 106 23 chr5 191957084 191957365 -11128167 + L2 LINE L2 2668 2986 -286 2188 84 0 7 chr5 191958850 191959164 -11126368 - AluY SINE Alu 0 312 1 781 235 24 14 chr5 191959166 191959309 -11126223 - Charlie5 DNA MER1_type -164 2460 2313 2116 134 0 0 chr5 191959309 191959615 -11125917 + AluSx SINE Alu 1 306 -6 781 235 24 14 chr5 191959615 191959684 -11125848 - Charlie5 DNA MER1_type -311 2313 2246 1411 191 18 73 chr5 191959749 191960100 -11125432 - AluJo SINE Alu 0 312 1 2268 81 0 0 chr5 191960131 191960440 -11125092 + AluSq SINE Alu 1 309 0 1401 130 5 23 chr5 191960453 191960668 -11124864 + AluSx SINE Alu 1 211 -101 2240 96 23 0 chr5 191961119 191961420 -11124112 - AluSx SINE Alu 0 312 5 240 35 0 0 chr5 191961650 191961679 -11123853 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 197 116 0 47 chr5 191961752 191961795 -11123737 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 2046 95 19 51 chr5 191962295 191962610 -11122922 + AluSx SINE Alu 3 307 -5 2542 36 0 3 chr5 191962612 191962914 -11122618 + AluY SINE Alu 3 303 -8 180 0 0 0 chr5 191962976 191962996 -11122536 + (TG)n Simple_repeat Simple_repeat 1 20 0 2291 119 0 0 chr5 191963156 191963468 -11122064 - AluSx SINE Alu 0 312 1 199 285 153 28 chr5 191963829 191963973 -11121559 + MIR SINE MIR 10 171 -91 200 257 19 76 chr5 191964845 191964950 -11120582 + MIR SINE MIR 1 99 -109 489 226 103 15 chr5 191965733 191965937 -11119595 + L2 LINE L2 2755 2976 -338 253 315 12 12 chr5 191966124 191966229 -11119303 - MIR SINE MIR -61 147 69 576 177 10 0 chr5 191968353 191968449 -11117083 - AluJo SINE Alu -90 222 126 791 179 0 36 chr5 191968461 191968590 -11116942 + AluJo SINE Alu 1 126 -186 1566 194 0 24 chr5 191968590 191968879 -11116653 - AluJb SINE Alu -23 289 8 204 336 65 19 chr5 191969111 191969218 -11116314 + MIR SINE MIR 38 149 -113 2154 109 0 0 chr5 191970064 191970348 -11115184 - AluSx SINE Alu -28 284 1 2139 129 0 0 chr5 191970349 191970651 -11114881 - AluSx SINE Alu -10 302 1 298 288 187 14 chr5 191970831 191970970 -11114562 + MIR SINE MIR 4 166 -96 910 172 94 15 chr5 191972967 191973170 -11112362 + MER20 DNA MER1_type 1 219 0 395 298 26 46 chr5 191974296 191974447 -11111085 - MIR SINE MIR -88 174 27 1976 118 35 0 chr5 191975952 191976240 -11109292 + AluSx SINE Alu 1 298 -14 2414 53 7 13 chr5 191976339 191976642 -11108890 + AluY SINE Alu 1 301 -10 246 326 22 0 chr5 191976811 191976903 -11108629 - L3 LINE CR1 -932 645 552 207 313 75 83 chr5 191976914 191977154 -11108378 - L2 LINE L2 -94 3178 2941 1549 105 0 0 chr5 191977277 191977515 -11108017 + MER41A LTR ERV1 3 240 -314 286 135 0 0 chr5 191977513 191977565 -11107967 + MER41A LTR ERV1 189 240 -314 * 2213 98 25 55 chr5 191977563 191977815 -11107717 + MER41A LTR ERV1 189 372 -182 2240 101 0 13 chr5 191977815 191978123 -11107409 + AluSx SINE Alu 1 304 -8 2213 98 25 55 chr5 191978123 191978301 -11107231 + MER41A LTR ERV1 372 554 0 1958 114 3 56 chr5 191978747 191979071 -11106461 - AluSg SINE Alu -1 309 3 306 120 0 0 chr5 191979270 191979320 -11106212 + L1MA9 LINE L1 5202 5251 -895 2231 122 0 3 chr5 191979346 191979658 -11105874 - AluSx SINE Alu -1 311 1 323 111 0 148 chr5 191979666 191979774 -11105758 + L1MA9 LINE L1 5254 5345 -967 1867 149 20 0 chr5 191979774 191980075 -11105457 - AluJb SINE Alu -5 307 1 2083 131 76 155 chr5 191980075 191980783 -11104749 + L1MA9 LINE L1 5661 6312 0 2136 104 7 16 chr5 191981626 191981933 -11103599 + AluSq SINE Alu 5 308 -5 2025 142 3 0 chr5 191982036 191982339 -11103193 - AluSq SINE Alu -9 304 1 1891 147 10 10 chr5 191982363 191982662 -11102870 - AluJb SINE Alu -13 299 1 25 75 0 0 chr5 191982686 191982739 -11102793 + AT_rich Low_complexity Low_complexity 1 53 0 2154 107 0 0 chr5 191982739 191983028 -11102504 - AluSx SINE Alu -9 303 15 818 185 25 19 chr5 191983036 191983228 -11102304 - AluJo SINE Alu 0 316 124 2012 82 57 0 chr5 191983283 191983563 -11101969 - AluSx SINE Alu -16 296 1 215 200 0 0 chr5 191983563 191983603 -11101929 - L2 LINE L2 -7 3306 3267 392 321 72 38 chr5 191983604 191983869 -11101663 - L2 LINE L2 -839 2475 2202 2600 36 3 0 chr5 191984381 191984689 -11100843 - AluY SINE Alu -2 309 1 24 0 0 0 chr5 191984895 191984919 -11100613 + AT_rich Low_complexity Low_complexity 1 24 0 1835 151 9 31 chr5 191984919 191985237 -11100295 + AluJo SINE Alu 1 311 -1 306 219 0 16 chr5 191985247 191985311 -11100221 + MIR SINE MIR 194 256 -6 2364 73 0 13 chr5 191985380 191985683 -11099849 + AluSq SINE Alu 1 299 -14 24 67 0 0 chr5 191986532 191986577 -11098955 + AT_rich Low_complexity Low_complexity 1 45 0 2049 100 0 7 chr5 191986956 191987237 -11098295 - AluSg SINE Alu -5 305 27 1837 131 3 14 chr5 191987239 191987530 -11098002 - AluSx SINE Alu -12 300 13 207 204 0 0 chr5 191987568 191987612 -11097920 + GA-rich Low_complexity Low_complexity 1 44 0 238 138 35 17 chr5 191987722 191987780 -11097752 - AluS SINE Alu -241 59 1 2091 120 13 0 chr5 191987814 191988115 -11097417 - AluSx SINE Alu -7 305 1 2095 107 38 0 chr5 191988125 191988415 -11097117 - AluSg SINE Alu -9 301 1 331 61 0 0 chr5 191988415 191988464 -11097068 + MADE1 DNA Mariner 32 80 0 268 311 16 60 chr5 191988469 191988652 -11096880 + L2 LINE L2 2865 3039 -233 350 242 197 23 chr5 191988844 191988976 -11096556 + MIR SINE MIR 12 166 -96 2483 59 3 0 chr5 191990727 191991031 -11094501 + AluSc SINE Alu 1 305 -4 1026 147 12 0 chr5 191991031 191991194 -11094338 + AluSg/x SINE Alu 134 298 -14 23 33 0 0 chr5 191993771 191993801 -11091731 + GC_rich Low_complexity Low_complexity 1 30 0 2494 37 0 3 chr5 191995488 191995785 -11089747 - AluY SINE Alu -14 297 2 1917 142 0 7 chr5 191996853 191997141 -11088391 - AluJo SINE Alu -26 286 1 605 266 40 9 chr5 191997686 191997908 -11087624 - L2 LINE L2 -211 3061 2833 180 270 122 0 chr5 191998113 191998187 -11087345 + L2 LINE L2 2920 3002 -270 2159 128 0 0 chr5 191998190 191998502 -11087030 - AluSq SINE Alu -1 312 1 270 129 48 0 chr5 191998505 191998567 -11086965 + CT-rich Low_complexity Low_complexity 2 66 0 1837 132 0 69 chr5 191998569 191998903 -11086629 - AluJo SINE Alu -1 311 1 182 313 16 0 chr5 191998903 191998967 -11086565 + L2 LINE L2 2996 3060 -212 194 279 0 0 chr5 191999532 191999575 -11085957 - L2 LINE L2 -17 3255 3213 * 389 271 127 0 chr5 191999574 191999692 -11085840 - MIR SINE MIR -92 170 38 275 0 29 0 chr5 191999961 191999996 -11085536 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 2348 72 7 10 chr5 192000015 192000321 -11085211 + AluSx SINE Alu 4 308 -4 704 224 53 11 chr5 192000503 192000782 -11084750 - L2 LINE L2 -253 3060 2771 1176 106 0 39 chr5 192000845 192001024 -11084508 - AluSg/x SINE Alu 0 312 141 1784 46 5 0 chr5 192001031 192001248 -11084284 - AluY SINE Alu -14 297 80 2316 93 3 3 chr5 192001371 192001683 -11083849 - AluSp SINE Alu -1 312 1 1774 119 119 4 chr5 192001702 192001970 -11083562 - AluSc SINE Alu 0 299 1 271 208 0 0 chr5 192001977 192002030 -11083502 - AluJ/monomer SINE Alu -4 298 246 468 282 0 0 chr5 192002843 192002960 -11082572 + MER53 DNA DNA 3 119 -70 993 119 7 0 chr5 192002970 192003121 -11082411 - AluSp/q SINE Alu -6 307 156 1366 102 0 0 chr5 192003151 192003337 -11082195 - AluSg/x SINE Alu 0 310 125 447 262 78 68 chr5 192003659 192003865 -11081667 + MIR SINE MIR 47 254 -8 240 233 292 0 chr5 192004311 192004431 -11081101 - L2 LINE L2 -3 3310 3156 1620 69 5 0 chr5 192004433 192004635 -11080897 - AluSp SINE Alu -16 297 95 552 145 0 0 chr5 192004768 192004851 -11080681 - AluSp SINE Alu -225 88 6 2101 101 20 0 chr5 192004858 192005154 -11080378 - AluSg SINE Alu -8 302 1 906 137 0 77 chr5 192005195 192005363 -11080169 - AluSg/x SINE Alu -29 283 129 2125 113 0 13 chr5 192005744 192006055 -11079477 + AluY SINE Alu 1 307 -4 2018 106 0 0 chr5 192006126 192006429 -11079103 + AluSx SINE Alu 1 303 0 404 276 19 45 chr5 192007042 192007198 -11078334 - MIR SINE MIR -82 180 29 182 231 0 0 chr5 192007361 192007400 -11078132 + MIR SINE MIR 109 147 -115 279 223 273 0 chr5 192008319 192008440 -11077092 - L2 LINE L2 -219 3053 2900 2124 113 0 13 chr5 192008590 192008892 -11076640 - AluSx SINE Alu -10 302 5 1807 125 16 40 chr5 192009391 192009695 -11075837 + AluSx SINE Alu 1 297 -15 327 295 170 8 chr5 192009698 192009939 -11075593 + L2 LINE L2 2698 2977 -337 210 183 0 100 chr5 192010012 192010072 -11075460 + L2 LINE L2 3206 3259 -13 2078 101 0 20 chr5 192010081 192010379 -11075153 - AluSx SINE Alu -20 292 1 2048 104 0 27 chr5 192011178 192011475 -11074057 - AluSx SINE Alu -23 289 1 945 156 0 28 chr5 192011576 192011756 -11073776 - AluSg/x SINE Alu 0 309 135 2182 54 50 0 chr5 192011882 192012160 -11073372 + AluY SINE Alu 1 292 -19 2139 112 3 0 chr5 192012415 192012709 -11072823 + AluSx SINE Alu 1 295 -17 307 202 0 95 chr5 192012711 192012795 -11072737 - L1MB8 LINE L1 -10 6168 6093 2383 57 0 10 chr5 192012798 192013095 -11072437 - AluY SINE Alu -17 294 1 1749 92 0 0 chr5 192013203 192013432 -11072100 - AluSx SINE Alu -82 230 2 1172 247 62 7 chr5 192013435 192013739 -11071793 - L1MB4 LINE L1 -42 6138 5818 1260 122 5 11 chr5 192013739 192013927 -11071605 - AluSg/x SINE Alu -17 295 109 2106 97 3 7 chr5 192013927 192014225 -11071307 - AluY SINE Alu -14 297 1 976 234 17 41 chr5 192014225 192014516 -11071016 - L1MB4 LINE L1 -363 5817 5534 24 0 0 0 chr5 192014551 192014575 -11070957 + AT_rich Low_complexity Low_complexity 1 24 0 640 218 18 35 chr5 192014589 192014639 -11070893 - Charlie5 DNA MER1_type -46 2578 2529 1946 111 57 3 chr5 192014639 192014936 -11070596 - AluSq SINE Alu 0 313 1 640 218 18 35 chr5 192014936 192015114 -11070418 - Charlie5 DNA MER1_type -95 2529 2354 1709 120 0 0 chr5 192015185 192015419 -11070113 + AluSx SINE Alu 1 234 -78 906 189 0 6 chr5 192015443 192015457 -11070075 + AluJb SINE Alu 120 133 -179 2192 79 10 3 chr5 192015457 192015748 -11069784 + AluY SINE Alu 1 293 -18 906 189 0 6 chr5 192015748 192015902 -11069630 + AluJb SINE Alu 133 287 -25 1757 128 75 4 chr5 192015902 192016183 -11069349 - AluSx SINE Alu -11 301 1 21 0 0 0 chr5 192016183 192016204 -11069328 + AT_rich Low_complexity Low_complexity 1 21 0 911 304 35 37 chr5 192021390 192021520 -11064012 - L1MC4a LINE L1 -1843 5965 5836 2163 75 27 7 chr5 192021520 192021812 -11063720 - AluY SINE Alu -13 298 1 911 304 35 37 chr5 192021812 192021962 -11063570 - L1MC4a LINE L1 -1972 5836 5687 1712 162 0 46 chr5 192021962 192022289 -11063243 - AluJb SINE Alu 0 312 1 911 304 35 37 chr5 192022289 192022520 -11063012 - L1MC4a LINE L1 -2121 5687 5454 790 207 28 39 chr5 192022613 192022661 -11062871 - MER45A DNA AcHobo -1403 178 131 2268 94 3 0 chr5 192022661 192022959 -11062573 + AluSx SINE Alu 1 299 -13 790 207 28 39 chr5 192022959 192023089 -11062443 - MER45A DNA AcHobo -1450 131 2 638 227 14 7 chr5 192023381 192023522 -11062010 - LTR16C LTR ERVL 0 491 350 878 122 0 58 chr5 192023530 192023669 -11061863 + FLAM_C SINE Alu 2 132 -1 726 249 82 41 chr5 192023695 192023964 -11061568 - LTR16C LTR ERVL -123 368 89 2068 114 0 10 chr5 192024086 192024394 -11061138 + AluSg SINE Alu 1 305 -5 271 72 4 4 chr5 192024883 192024926 -11060606 - AluSp/q SINE Alu -32 271 237 1986 134 0 7 chr5 192025000 192025299 -11060233 + AluSx SINE Alu 1 297 -15 338 302 36 21 chr5 192025957 192026098 -11059434 - MIR SINE MIR -71 137 13 1205 132 0 0 chr5 192026692 192026866 -11058666 - AluSg/x SINE Alu -3 307 134 3644 133 10 37 chr5 192026868 192027485 -11058047 - L1MA7 LINE L1 0 6291 5692 206 320 13 0 chr5 192027485 192027560 -11057972 + L2 LINE L2 3189 3264 -8 407 115 0 0 chr5 192027571 192027623 -11057909 - AluJ/FRAM SINE Alu -29 283 232 1809 108 56 36 chr5 192028822 192029128 -11056404 - AluSx SINE Alu 0 312 1 216 67 0 0 chr5 192029508 192029538 -11055994 + (TG)n Simple_repeat Simple_repeat 2 31 0 693 195 0 0 chr5 192029552 192029670 -11055862 - FLAM_C SINE Alu -15 118 1 1709 176 3 3 chr5 192029680 192029982 -11055550 - AluJb SINE Alu -10 302 1 473 350 40 55 chr5 192029997 192030271 -11055261 - L1MC4a LINE L1 -1890 5918 5649 1468 196 86 42 chr5 192030277 192030540 -11054992 - L1MB5 LINE L1 -1 6173 5923 2177 89 0 7 chr5 192030540 192030831 -11054701 - AluSq SINE Alu -11 302 14 1468 196 86 42 chr5 192030831 192030938 -11054594 - L1MB5 LINE L1 -251 5923 5781 2521 59 0 0 chr5 192030938 192031244 -11054288 + AluY SINE Alu 1 306 -5 1468 196 86 42 chr5 192031244 192031281 -11054251 - L1MB5 LINE L1 -393 5781 5747 272 339 153 0 chr5 192031856 192031974 -11053558 - L2 LINE L2 -20 3252 3117 273 308 126 14 chr5 192032169 192032312 -11053220 + MIR SINE MIR 47 205 -57 382 264 47 44 chr5 192034759 192034927 -11050605 + MIR SINE MIR 76 242 -20 379 305 94 28 chr5 192034950 192035063 -11050469 + MIR SINE MIR 31 135 -127 2352 151 31 58 chr5 192035063 192035130 -11050402 - Tigger2a DNA MER2_type -2275 433 366 2030 122 0 20 chr5 192035130 192035434 -11050098 - AluSg SINE Alu -12 298 1 2352 151 31 58 chr5 192035434 192035811 -11049721 - Tigger2a DNA MER2_type -2342 366 1 379 305 94 28 chr5 192035811 192035910 -11049622 + MIR SINE MIR 135 257 -5 217 233 0 0 chr5 192035923 192035966 -11049566 - L2 LINE L2 -6 3266 3224 233 341 36 51 chr5 192036113 192036251 -11049281 + MIR SINE MIR 28 163 -99 * 532 271 41 59 chr5 192036232 192036453 -11049079 - MIR SINE MIR 0 262 46 1896 135 11 0 chr5 192036794 192037103 -11048429 + AluSx SINE Alu 1 312 0 436 261 9 0 chr5 192037280 192037391 -11048141 + MIR SINE MIR 89 200 -62 223 328 0 0 chr5 192038894 192038958 -11046574 - MIR SINE MIR -67 141 78 2073 113 7 13 chr5 192039927 192040236 -11045296 - AluJb SINE Alu -5 307 1 2346 57 0 3 chr5 192041569 192041865 -11043667 + AluSc SINE Alu 1 295 -14 1222 100 21 42 chr5 192041865 192042055 -11043477 + L1PB1 LINE L1 5964 6149 -2 244 127 36 0 chr5 192042637 192042692 -11042840 + GA-rich Low_complexity Low_complexity 2 58 0 304 413 25 42 chr5 192042692 192043092 -11042440 + HAL1 LINE L1 880 1272 -1235 27 29 0 0 chr5 192044163 192044197 -11041335 + GC_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 192044233 192044261 -11041271 + GC_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr5 192044715 192044744 -11040788 + GC_rich Low_complexity Low_complexity 1 29 0 297 75 0 0 chr5 192045293 192045333 -11040199 + (TG)n Simple_repeat Simple_repeat 2 41 0 331 288 60 33 chr5 192048013 192048236 -11037296 + MIR SINE MIR 11 241 -21 201 271 71 0 chr5 192048484 192048554 -11036978 + MIR SINE MIR 46 120 -142 250 309 100 13 chr5 192048690 192048842 -11036690 + MIR SINE MIR 41 203 -59 320 255 0 32 chr5 192048948 192049042 -11036490 - MIR SINE MIR -69 193 103 276 203 76 13 chr5 192049251 192049330 -11036202 + MIR SINE MIR 56 139 -123 1019 178 22 0 chr5 192049556 192049741 -11035791 + MER5A DNA MER1_type 1 189 0 224 135 0 0 chr5 192050758 192050795 -11034737 - L2 LINE L2 0 3313 3277 239 247 14 27 chr5 192051050 192051123 -11034409 - MIR SINE MIR -163 99 28 434 274 74 15 chr5 192052631 192052766 -11032766 + MIR SINE MIR 11 153 -109 1716 173 14 0 chr5 192052879 192053188 -11032344 + AluJb SINE Alu 1 313 0 2618 46 10 0 chr5 192054389 192054693 -11030839 + AluY SINE Alu 1 307 -4 1326 206 185 8 chr5 192054713 192055107 -11030425 + MLT1F1 LTR MaLR 93 556 -11 375 279 109 18 chr5 192055201 192055366 -11030166 + MIR SINE MIR 31 210 -52 385 192 87 0 chr5 192057634 192057738 -11027794 - MIR SINE MIR -30 232 120 384 287 49 67 chr5 192057741 192057899 -11027633 + MIR SINE MIR 12 166 -96 2365 102 0 6 chr5 192057899 192058213 -11027319 + AluSx SINE Alu 1 312 0 384 287 49 67 chr5 192058213 192058277 -11027255 + MIR SINE MIR 166 230 -32 365 216 120 48 chr5 192058708 192058833 -11026699 + L2 LINE L2 3180 3313 0 262 226 198 9 chr5 192058988 192059094 -11026438 - MIR SINE MIR -71 191 66 23 54 0 0 chr5 192059094 192059131 -11026401 + AT_rich Low_complexity Low_complexity 1 37 0 2322 108 0 0 chr5 192059131 192059426 -11026106 - AluSx SINE Alu -17 295 1 1487 101 0 18 chr5 192059428 192059655 -11025877 - L1MA4A LINE L1 0 6303 6081 310 353 38 38 chr5 192059776 192059909 -11025623 + L2 LINE L2 3139 3271 -1 211 254 15 15 chr5 192062678 192062745 -11022787 + (TTCA)n Simple_repeat Simple_repeat 2 68 0 192 200 0 0 chr5 192062929 192062969 -11022563 - L2 LINE L2 -213 3059 3020 342 333 56 30 chr5 192063117 192063351 -11022181 - L2 LINE L2 -518 2796 2557 392 252 49 16 chr5 192063563 192063686 -11021846 + MIR SINE MIR 84 210 -52 660 270 50 9 chr5 192064680 192064902 -11020630 + MIR SINE MIR 15 245 -17 2418 87 3 7 chr5 192065370 192065679 -11019853 - AluSg SINE Alu -2 308 1 1910 160 0 17 chr5 192065725 192066018 -11019514 - AluSx SINE Alu -24 288 1 1590 162 40 4 chr5 192066024 192066302 -11019230 - AluJo SINE Alu -24 288 1 462 307 76 22 chr5 192067025 192067250 -11018282 - MIR SINE MIR 0 262 26 686 140 0 18 chr5 192067941 192068055 -11017477 + AluSg/x SINE Alu 199 310 0 2176 111 3 3 chr5 192068261 192068559 -11016973 - AluSx SINE Alu -14 298 1 26 30 0 0 chr5 192069316 192069349 -11016183 + AT_rich Low_complexity Low_complexity 1 33 0 197 316 128 15 chr5 192070618 192070751 -11014781 - L2 LINE L2 -229 3043 2896 1956 140 7 3 chr5 192071212 192071536 -11013996 + AluJb SINE Alu 1 325 0 254 182 0 91 chr5 192071916 192072015 -11013517 + (CAGAGA)n Simple_repeat Simple_repeat 4 93 0 424 93 0 0 chr5 192072123 192072177 -11013355 - U13 snRNA snRNA -50 54 1 535 247 119 85 chr5 192072465 192072911 -11012621 - L2 LINE L2 -6 3266 2806 2157 90 11 4 chr5 192073056 192073369 -11012163 + AluSx SINE Alu 1 315 0 211 239 0 0 chr5 192074108 192074154 -11011378 - L2 LINE L2 -17 3296 3251 287 333 0 0 chr5 192074826 192074913 -11010619 - MIR SINE MIR -150 112 26 1750 181 20 7 chr5 192075250 192075549 -11009983 + AluJb SINE Alu 1 303 -9 227 317 12 24 chr5 192075958 192076040 -11009492 + MIR SINE MIR 42 122 -86 1582 175 157 9 chr5 192076207 192076550 -11008982 + MSTD LTR MaLR 1 394 -2 2084 77 73 7 chr5 192077316 192077588 -11007944 - AluSg SINE Alu -20 290 1 635 132 0 184 chr5 192077597 192077749 -11007783 - FLAM_C SINE Alu -18 125 2 270 95 0 0 chr5 192077847 192077889 -11007643 + (A)n Simple_repeat Simple_repeat 1 42 0 412 253 156 39 chr5 192078029 192078148 -11007384 + MIR SINE MIR 63 205 -57 579 53 0 0 chr5 192078148 192078223 -11007309 + (TA)n Simple_repeat Simple_repeat 2 76 0 412 253 156 39 chr5 192078223 192078257 -11007275 + MIR SINE MIR 205 234 -28 207 0 0 0 chr5 192078900 192078923 -11006609 + (T)n Simple_repeat Simple_repeat 1 23 0 26 30 0 0 chr5 192079770 192079803 -11005729 + AT_rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr5 192080098 192080122 -11005410 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 333 0 0 0 chr5 192080121 192080158 -11005374 + (CA)n Simple_repeat Simple_repeat 1 37 0 670 233 42 47 chr5 192080668 192080883 -11004649 + MER102a DNA MER1_type 117 330 0 599 313 12 21 chr5 192081652 192081892 -11003640 + MIR SINE MIR 6 243 -19 3185 79 23 14 chr5 192081925 192082368 -11003164 - L1PA15 LINE L1 -9 6156 5710 393 22 0 0 chr5 192083165 192083211 -11002321 + (A)n Simple_repeat Simple_repeat 1 46 0 458 260 175 7 chr5 192085838 192085992 -10999540 + MIR SINE MIR 13 192 -70 2214 103 23 3 chr5 192086456 192086757 -10998775 - AluSg SINE Alu -3 307 1 1737 168 0 46 chr5 192086939 192087266 -10998266 + AluJb SINE Alu 1 312 0 2201 113 3 3 chr5 192087349 192087650 -10997882 - AluSg SINE Alu -9 301 1 721 137 0 17 chr5 192087654 192087771 -10997761 - FLAM_A SINE Alu -15 127 13 257 318 188 0 chr5 192087890 192088060 -10997472 + MIR SINE MIR 55 256 -6 21 0 0 0 chr5 192088307 192088328 -10997204 + AT_rich Low_complexity Low_complexity 1 21 0 181 282 65 57 chr5 192088707 192088742 -10996790 + L2 LINE L2 3185 3218 -95 2067 135 17 0 chr5 192088742 192089031 -10996501 - AluSp SINE Alu -19 294 1 181 282 65 57 chr5 192089031 192089119 -10996413 + L2 LINE L2 3218 3309 -4 257 286 18 45 chr5 192089451 192089563 -10995969 + MIR SINE MIR 6 114 -148 726 235 50 29 chr5 192089625 192089863 -10995669 - MIR SINE MIR 0 262 20 1702 121 4 4 chr5 192089881 192090138 -10995394 - L1PB2 LINE L1 -1 6150 5894 1864 171 3 0 chr5 192090208 192090501 -10995031 - AluJo SINE Alu -16 296 3 248 274 98 0 chr5 192090790 192090892 -10994640 - MIR SINE MIR -64 198 87 1477 141 52 4 chr5 192091501 192091770 -10993762 + L1MA5 LINE L1 6017 6298 -2 202 162 27 0 chr5 192091812 192091849 -10993683 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 216 273 124 8 chr5 192092966 192093087 -10992445 + MIR SINE MIR 98 232 -30 183 100 0 0 chr5 192093163 192093193 -10992339 + (T)n Simple_repeat Simple_repeat 1 30 0 348 239 0 0 chr5 192093557 192093649 -10991883 - L1MA4A LINE L1 -24 6981 6890 627 148 34 13 chr5 192093652 192093801 -10991731 - L1MA4A LINE L1 -181 6824 6673 999 130 43 12 chr5 192093803 192093965 -10991567 - AluSg/x SINE Alu -12 300 134 2416 80 0 7 chr5 192093965 192094267 -10991265 - AluSx SINE Alu -12 300 1 2088 145 7 0 chr5 192094276 192094586 -10990946 - AluSx SINE Alu 0 312 1 11379 164 30 13 chr5 192094588 192096124 -10989408 - L1MA4A LINE L1 -322 6683 5174 378 0 0 0 chr5 192096124 192096166 -10989366 + (TG)n Simple_repeat Simple_repeat 2 43 0 2347 82 3 3 chr5 192096167 192096461 -10989071 - AluSp SINE Alu -19 294 1 11379 164 30 13 chr5 192096461 192097865 -10987667 - L1MA4A LINE L1 -1830 5175 3696 680 187 38 27 chr5 192097934 192098117 -10987415 - MIR SINE MIR -49 213 31 2389 83 0 0 chr5 192100019 192100319 -10985213 - AluY SINE Alu -11 300 1 24 53 0 0 chr5 192100322 192100360 -10985172 + AT_rich Low_complexity Low_complexity 1 38 0 8242 186 29 14 chr5 192102643 192102906 -10982626 - L1MA4A LINE L1 -3136 3712 3454 1867 156 32 0 chr5 192102906 192103188 -10982344 + AluJo SINE Alu 1 291 -21 8242 186 29 14 chr5 192103188 192105477 -10980055 - L1MA4A LINE L1 -3394 3454 1120 558 265 21 21 chr5 192105495 192105684 -10979848 - L1MA4A LINE L1 -6314 535 347 277 286 61 58 chr5 192157179 192157374 -10928158 - MIR SINE MIR -50 212 12 955 285 123 40 chr5 192157614 192158143 -10927389 - MLT1K LTR MaLR -8 580 8 2482 152 73 4 chr5 192158244 192158698 -10926834 + MER31A LTR ERV1 1 485 0 234 156 0 0 chr5 192159334 192159379 -10926153 + A-rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr5 192159685 192159712 -10925820 + AT_rich Low_complexity Low_complexity 1 27 0 333 0 0 0 chr5 192159917 192159954 -10925578 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 232 288 55 14 chr5 192159973 192160046 -10925486 - L2 LINE L2 -50 3263 3188 286 311 34 8 chr5 192160071 192160190 -10925342 - L2 LINE L2 -2 3311 3190 491 236 16 16 chr5 192160231 192160354 -10925178 - L2 LINE L2 0 3313 3191 396 285 1 3 chr5 192161116 192161229 -10924303 - MIR SINE MIR -62 146 43 256 326 63 0 chr5 192161480 192161575 -10923957 - MIR SINE MIR -12 250 150 814 244 232 13 chr5 192161611 192162004 -10923528 - L2 LINE L2 -2 3311 2833 493 254 183 10 chr5 192162524 192162721 -10922811 - MIR SINE MIR -1 261 31 194 188 42 21 chr5 192162976 192163024 -10922508 + MIR SINE MIR 69 117 -145 348 302 0 0 chr5 192163176 192163262 -10922270 - MIR SINE MIR -58 150 65 243 222 0 0 chr5 192163375 192163456 -10922076 + G-rich Low_complexity Low_complexity 3 83 0 2479 87 0 0 chr5 192163798 192164107 -10921425 - AluSc SINE Alu 0 309 1 422 285 46 6 chr5 192164137 192164308 -10921224 - MIR SINE MIR -65 143 17 290 324 37 0 chr5 192165100 192165208 -10920324 - MIR SINE MIR -65 197 86 394 286 83 0 chr5 192165296 192165429 -10920103 - MIR3 SINE MIR -61 147 4 1019 243 78 48 chr5 192165446 192165950 -10919582 - MLT1K LTR MaLR 0 588 40 891 177 44 0 chr5 192165978 192166159 -10919373 - MER5A DNA MER1_type 0 189 1 1578 270 130 60 chr5 192166238 192166834 -10918698 + Charlie2b DNA MER1_type 53 606 -2176 252 0 0 0 chr5 192166834 192166862 -10918670 + (CCTA)n Simple_repeat Simple_repeat 2 29 0 1578 270 130 60 chr5 192166862 192167079 -10918453 + Charlie2b DNA MER1_type 606 806 -1976 1853 154 10 26 chr5 192167079 192167390 -10918142 - AluSx SINE Alu -6 306 1 1578 270 130 60 chr5 192167390 192167642 -10917890 + Charlie2b DNA MER1_type 806 1194 -1588 2458 81 3 0 chr5 192168267 192168565 -10916967 - AluSp SINE Alu -14 299 1 2450 106 0 0 chr5 192168572 192168884 -10916648 - AluSx SINE Alu 0 312 1 428 319 196 4 chr5 192168890 192169160 -10916372 - L2 LINE L2 -16 3256 2935 896 173 13 89 chr5 192169469 192169706 -10915826 + MER20 DNA MER1_type 1 219 0 1307 191 26 122 chr5 192169706 192169810 -10915722 - L1MC5 LINE L1 -755 7206 7094 2685 58 0 0 chr5 192169810 192170119 -10915413 + AluY SINE Alu 2 310 -1 1307 191 26 122 chr5 192170119 192170292 -10915240 - L1MC5 LINE L1 -867 7094 6906 2125 131 3 0 chr5 192170292 192170589 -10914943 - AluSx SINE Alu -14 298 1 1307 191 26 122 chr5 192170589 192170853 -10914679 - L1MC5 LINE L1 -1055 6906 6716 2150 100 0 94 chr5 192170945 192171285 -10914247 + AluSg SINE Alu 1 308 -2 219 250 33 0 chr5 192171880 192171940 -10913592 + CT-rich Low_complexity Low_complexity 5 66 0 205 274 0 20 chr5 192172061 192172112 -10913420 - L2 LINE L2 -107 3165 3116 1787 141 4 11 chr5 192172442 192172719 -10912813 - AluJo SINE Alu 0 312 38 373 313 0 0 chr5 192172719 192172831 -10912701 + MLT1L LTR MaLR 128 239 -376 694 104 9 0 chr5 192172881 192172987 -10912545 - AluJ SINE Alu -8 304 198 967 147 7 13 chr5 192172988 192173138 -10912394 - AluJ SINE Alu -163 149 1 540 258 86 42 chr5 192173147 192173441 -10912091 + MLT1L LTR MaLR 263 511 0 1739 160 24 17 chr5 192173666 192173954 -10911578 - AluJb SINE Alu -22 290 1 193 209 47 0 chr5 192174052 192174095 -10911437 - L2 LINE L2 -15 3298 3254 319 240 48 0 chr5 192174269 192174394 -10911138 - MER113 DNA MER1_type? -352 169 39 1229 211 39 0 chr5 192174736 192174996 -10910536 + MER82 DNA MER2_type 2 271 -382 867 221 7 112 chr5 192174999 192175130 -10910402 + MER82 DNA MER2_type 399 542 -111 1811 137 90 0 chr5 192175130 192175407 -10910125 + AluSg SINE Alu 1 302 -8 867 221 7 112 chr5 192175407 192175458 -10910074 + MER82 DNA MER2_type 542 597 -56 2480 74 7 0 chr5 192175458 192175767 -10909765 + AluY SINE Alu 1 311 0 867 221 7 112 chr5 192175767 192175868 -10909664 + MER82 DNA MER2_type 597 653 0 797 9 27 9 chr5 192175869 192175980 -10909552 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 267 261 15 0 chr5 192176119 192176184 -10909348 + MLT1K LTR MaLR 517 582 -6 187 167 0 0 chr5 192176197 192176227 -10909305 + L2 LINE L2 3226 3255 -17 266 300 130 90 chr5 192177015 192177306 -10908226 + L2 LINE L2 2384 2705 -609 2483 72 3 22 chr5 192177306 192177625 -10907907 - AluSq SINE Alu 0 313 1 266 300 130 90 chr5 192177625 192177833 -10907699 + L2 LINE L2 2705 2903 -411 323 323 47 8 chr5 192178012 192178139 -10907393 + MLT1K LTR MaLR 422 553 -35 567 236 35 0 chr5 192178314 192178458 -10907074 - MIR SINE MIR -50 212 64 1805 40 0 0 chr5 192178479 192178704 -10906828 - L1PA5 LINE L1 -51 6103 5879 366 258 61 45 chr5 192178774 192178906 -10906626 - L2 LINE L2 0 3313 3180 762 207 24 6 chr5 192179432 192179596 -10905936 - MER117 DNA MER1_type -21 176 10 415 241 56 19 chr5 192179613 192179721 -10905811 + MIR3 SINE MIR 82 193 -15 262 214 214 8 chr5 192180021 192180138 -10905394 - MIR SINE MIR -102 160 20 660 221 55 39 chr5 192180373 192180554 -10904978 + MLT1J2 LTR MaLR 73 256 -194 263 175 0 63 chr5 192180625 192180688 -10904844 + MLT1J2 LTR MaLR 391 449 -1 180 333 61 0 chr5 192180726 192180792 -10904740 + L2 LINE L2 3106 3175 -97 814 281 48 0 chr5 192180877 192181108 -10904424 + MIR SINE MIR 8 249 -13 215 245 0 0 chr5 192182290 192182343 -10903189 + (TGAA)n Simple_repeat Simple_repeat 3 55 0 234 136 0 0 chr5 192182365 192182409 -10903123 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 664 245 5 64 chr5 192183272 192183314 -10902218 - MIR SINE MIR -79 183 140 2292 82 3 33 chr5 192183314 192183618 -10901914 - AluSq SINE Alu -18 295 1 664 245 5 64 chr5 192183618 192183763 -10901769 - MIR SINE MIR -122 140 7 256 326 207 0 chr5 192185010 192185203 -10900329 + MIR SINE MIR 30 262 0 372 305 30 23 chr5 192185230 192185361 -10900171 - MIR SINE MIR -111 151 20 294 272 46 30 chr5 192186303 192186452 -10899080 + MIR3 SINE MIR 1 156 -65 603 283 150 0 chr5 192186863 192187043 -10898489 - MIR SINE MIR -9 253 47 498 314 12 12 chr5 192187225 192187397 -10898135 - MIR SINE MIR 0 262 91 193 250 0 0 chr5 192187601 192187661 -10897871 - MIR SINE MIR -84 124 65 185 274 116 32 chr5 192188299 192188394 -10897138 - MIR SINE MIR -6 256 154 346 301 15 23 chr5 192188560 192188693 -10896839 - MIR SINE MIR -129 133 2 1031 264 101 26 chr5 192188988 192189374 -10896158 + MLT1J2 LTR MaLR 36 450 0 249 292 124 9 chr5 192189533 192189646 -10895886 - L2 LINE L2 -10 3262 3137 449 226 23 129 chr5 192189762 192189979 -10895553 - Charlie8 DNA MER1_type -2152 265 72 2160 116 0 0 chr5 192190058 192190335 -10895197 + AluSq SINE Alu 1 277 -36 182 33 67 0 chr5 192190337 192190367 -10895165 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1776 122 37 0 chr5 192191921 192192166 -10893366 - AluJb SINE Alu -24 288 35 25 0 0 0 chr5 192192166 192192191 -10893341 + AT_rich Low_complexity Low_complexity 1 25 0 463 246 92 8 chr5 192192492 192192622 -10892910 + MER8 DNA MER2_type 2 142 -97 435 351 49 63 chr5 192192783 192193067 -10892465 - L1MC/D LINE L1 -2150 5635 5349 383 56 19 0 chr5 192193171 192193225 -10892307 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 2288 113 10 0 chr5 192193238 192193540 -10891992 + AluSx SINE Alu 1 305 -7 3813 155 15 68 chr5 192193628 192194215 -10891317 + L1MB2 LINE L1 5395 5929 -242 2318 82 3 23 chr5 192194215 192194518 -10891014 - AluSq SINE Alu -16 297 1 3813 155 15 68 chr5 192194518 192194738 -10890794 + L1MB2 LINE L1 5929 6159 -12 196 215 70 0 chr5 192195330 192195426 -10890106 - MIR SINE MIR -1 261 71 376 246 44 9 chr5 192196170 192196520 -10889012 + (CA)n Simple_repeat Simple_repeat 1 362 0 513 184 0 26 chr5 192197454 192197606 -10887926 + GA-rich Low_complexity Low_complexity 3 150 0 187 269 218 0 chr5 192197624 192197702 -10887830 - MIR SINE MIR -6 256 162 2288 108 3 0 chr5 192197883 192198178 -10887354 + AluSx SINE Alu 1 296 -16 553 280 0 13 chr5 192198392 192198549 -10886983 - MIR SINE MIR -52 210 56 2150 125 3 7 chr5 192199125 192199429 -10886103 - AluSx SINE Alu -9 303 1 1449 211 4 4 chr5 192199436 192199706 -10885826 - AluJo SINE Alu -14 298 29 774 156 0 0 chr5 192199793 192199928 -10885604 + CT-rich Low_complexity Low_complexity 2 136 0 1149 62 0 31 chr5 192199928 192200088 -10885444 - L1PA7 LINE L1 0 6154 6000 368 286 48 53 chr5 192200100 192200289 -10885243 - MIR SINE MIR -48 214 27 316 318 176 12 chr5 192200808 192200978 -10884554 - MIR SINE MIR 0 262 65 321 289 40 59 chr5 192201021 192201173 -10884359 + MIR SINE MIR 111 259 -3 228 238 12 75 chr5 192201191 192201271 -10884261 - L2 LINE L2 -84 3229 3155 191 238 203 35 chr5 192201755 192201898 -10883634 + MIR SINE MIR 42 208 -54 595 305 6 12 chr5 192201924 192202129 -10883403 - MIR SINE MIR -10 252 50 2348 113 7 0 chr5 192202146 192202456 -10883076 + AluSx SINE Alu 1 312 0 884 196 5 5 chr5 192202712 192202901 -10882631 + MER53 DNA DNA 1 189 0 2083 110 0 68 chr5 192203013 192203339 -10882193 - AluSx SINE Alu -8 304 1 660 226 83 74 chr5 192203476 192203550 -10881982 + MER58A DNA MER1_type 5 77 -2343 2374 93 0 3 chr5 192203550 192203850 -10881682 + AluSg SINE Alu 1 299 -11 660 226 83 74 chr5 192203850 192203992 -10881540 + MER58A DNA MER1_type 77 223 -1 31 26 0 0 chr5 192204191 192204229 -10881303 + AT_rich Low_complexity Low_complexity 1 38 0 818 107 0 0 chr5 192204229 192204341 -10881191 - FLAM_C SINE Alu -17 116 5 724 102 16 39 chr5 192204917 192205044 -10880488 - LTR40a LTR ERVL 0 519 396 424 261 0 22 chr5 192205048 192205140 -10880392 + L1MC4 LINE L1 6614 6703 -1339 760 23 0 0 chr5 192205144 192205232 -10880300 - L1PA7 LINE L1 -20 6134 6047 1083 251 162 6 chr5 192205236 192205570 -10879962 - LTR40a LTR ERVL -112 407 22 1094 122 58 0 chr5 192205570 192205726 -10879806 + AluSg/x SINE Alu 134 298 -12 830 156 91 13 chr5 192205950 192206104 -10879428 + FRAM SINE Alu 1 166 0 2344 226 12 27 chr5 192206348 192206910 -10878622 + MLT2B3 LTR ERVL 1 554 0 510 256 19 72 chr5 192206979 192207186 -10878346 - L2 LINE L2 -162 3110 2915 202 293 17 0 chr5 192207221 192207279 -10878253 - L2 LINE L2 -396 2917 2859 512 341 11 38 chr5 192207926 192208194 -10877338 - HERV16-D LTR ERVL -2230 3424 3168 2140 127 0 10 chr5 192208194 192208494 -10877038 - AluSx SINE Alu -4 308 12 1450 308 5 11 chr5 192208506 192208951 -10876581 - HERV16-D LTR ERVL -2545 3219 2778 1009 104 0 7 chr5 192208960 192209095 -10876437 - AluSg/x SINE Alu -12 298 165 664 370 55 3 chr5 192209102 192209413 -10876119 - HERV16-D LTR ERVL -2264 2732 2405 * 1740 291 84 18 chr5 192209411 192210065 -10875467 - HERV16-D LTR ERVL -4165 831 135 497 305 18 12 chr5 192210222 192210386 -10875146 - LTR16A LTR ERVL -258 192 28 259 171 29 152 chr5 192210589 192210643 -10874889 - MIR SINE MIR -69 193 157 2340 91 3 0 chr5 192210643 192210940 -10874592 - AluSp SINE Alu -15 298 1 259 171 29 152 chr5 192210940 192210990 -10874542 - MIR SINE MIR -105 157 102 196 373 95 27 chr5 192211722 192212060 -10873472 + L2 LINE L2 2243 2603 -711 2016 94 73 4 chr5 192212246 192212521 -10873011 - AluSp SINE Alu -10 303 10 2338 96 0 3 chr5 192212683 192212976 -10872556 - AluSg SINE Alu -18 292 1 289 54 0 0 chr5 192213068 192213105 -10872427 - U1 snRNA snRNA -128 37 1 1881 158 25 3 chr5 192213237 192213391 -10872141 - AluJb SINE Alu -21 291 127 213 39 0 0 chr5 192213391 192213417 -10872115 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1881 158 25 3 chr5 192213417 192213547 -10871985 - AluJb SINE Alu -185 127 1 22 56 0 0 chr5 192213547 192213583 -10871949 + AT_rich Low_complexity Low_complexity 1 36 0 2000 193 10 37 chr5 192213583 192213988 -10871544 - MLT2D LTR ERVL -20 394 1 283 278 0 0 chr5 192214016 192214088 -10871444 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 231 167 0 0 chr5 192214120 192214162 -10871370 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 272 331 23 8 chr5 192214174 192214304 -10871228 + (TGGG)n Simple_repeat Simple_repeat 3 134 0 427 270 46 40 chr5 192214617 192214791 -10870741 + MIR SINE MIR 82 256 -6 297 51 0 0 chr5 192215187 192215226 -10870306 + (CA)n Simple_repeat Simple_repeat 1 39 0 570 301 69 1 chr5 192215266 192215476 -10870056 + MIR SINE MIR 26 249 -13 534 219 24 53 chr5 192215637 192215654 -10869878 - L1MA10 LINE L1 -1 6333 6317 1350 228 48 33 chr5 192215654 192216053 -10869479 - L1ME1 LINE L1 -5 6161 5757 204 97 0 0 chr5 192216119 192216150 -10869382 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 188 317 33 0 chr5 192216151 192216211 -10869321 - L2 LINE L2 -13 3300 3239 408 40 0 0 chr5 192216214 192216264 -10869268 + (TA)n Simple_repeat Simple_repeat 2 51 0 311 320 123 10 chr5 192216273 192216476 -10869056 - L2 LINE L2 -56 3257 3032 1277 264 93 24 chr5 192216585 192217165 -10868367 - L2 LINE L2 -1049 2265 1646 2350 98 0 0 chr5 192217348 192217644 -10867888 - AluSg SINE Alu -12 298 3 533 230 9 0 chr5 192218078 192218191 -10867341 - MER81 DNA DNA 0 114 1 641 274 106 0 chr5 192218286 192218465 -10867067 + MIR SINE MIR 57 254 -8 282 267 27 0 chr5 192218886 192218961 -10866571 + L2 LINE L2 3182 3258 -14 465 289 81 24 chr5 192218970 192219043 -10866489 - MIR SINE MIR -27 235 168 2402 84 0 3 chr5 192219043 192219342 -10866190 - AluSc SINE Alu -11 298 1 465 289 81 24 chr5 192219342 192219479 -10866053 - MIR SINE MIR -94 168 13 387 278 66 55 chr5 192219655 192219880 -10865652 + MIR SINE MIR 33 262 0 233 333 35 21 chr5 192220000 192220144 -10865388 - L2 LINE L2 -1041 2273 2128 1962 160 3 16 chr5 192220575 192220882 -10864650 + AluSx SINE Alu 1 303 -9 181 273 18 0 chr5 192223432 192223487 -10862045 - MIR SINE MIR -161 101 46 225 326 139 49 chr5 192223905 192224193 -10861339 - L2 LINE L2 -37 3235 2922 187 167 21 0 chr5 192224592 192224640 -10860892 + MIR SINE MIR 81 129 -79 1653 173 0 51 chr5 192224945 192225257 -10860275 - AluJo SINE Alu -14 298 3 645 96 0 0 chr5 192225306 192225400 -10860132 + (TCCA)n Simple_repeat Simple_repeat 4 97 0 305 348 64 0 chr5 192225540 192225681 -10859851 + MIR SINE MIR 65 214 -48 310 228 133 13 chr5 192226248 192226406 -10859126 - L2 LINE L2 -213 3059 2883 278 312 46 18 chr5 192226486 192226595 -10858937 - MIR SINE MIR -87 175 64 395 285 158 15 chr5 192227643 192227852 -10857680 - MIR SINE MIR -23 239 3 225 0 0 0 chr5 192228038 192228063 -10857469 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 959 151 0 11 chr5 192228071 192228250 -10857282 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 187 284 0 45 chr5 192228315 192228382 -10857150 - MIR3 SINE MIR -3 205 142 240 264 10 42 chr5 192228408 192228525 -10857007 - MIR SINE MIR -63 145 33 2136 236 123 36 chr5 192228558 192228740 -10856792 - L2 LINE L2 -432 2882 2717 2299 123 0 0 chr5 192228740 192229049 -10856483 + AluSx SINE Alu 1 309 -3 2136 236 123 36 chr5 192229049 192229579 -10855953 - L2 LINE L2 -597 2717 2108 182 211 18 70 chr5 192229528 192229585 -10855947 - L3 LINE CR1 -936 641 588 * 344 248 10 0 chr5 192229913 192230013 -10855519 - MIR SINE MIR -57 151 95 2112 114 17 17 chr5 192230095 192230394 -10855138 - AluSq SINE Alu -12 301 3 775 216 106 0 chr5 192230457 192230665 -10854867 - MER102a DNA MER1_type -9 321 92 303 194 87 36 chr5 192230744 192230855 -10854677 + MIR SINE MIR 11 130 -78 192 167 0 0 chr5 192231372 192231402 -10854130 - L2 LINE L2 -18 3295 3266 458 317 83 39 chr5 192231505 192232148 -10853384 + L2 LINE L2 2418 3091 -181 26 0 0 0 chr5 192232254 192232280 -10853252 + AT_rich Low_complexity Low_complexity 1 26 0 2176 117 0 13 chr5 192232280 192232579 -10852953 - AluSx SINE Alu -17 295 1 692 258 60 0 chr5 192232672 192232839 -10852693 - MIR SINE MIR -31 231 55 453 299 22 8 chr5 192232884 192233018 -10852514 + L2 LINE L2 3136 3271 -1 993 192 0 11 chr5 192233283 192233460 -10852072 + FRAM SINE Alu 1 175 -1 205 292 44 53 chr5 192233509 192233622 -10851910 - MIR SINE MIR -115 147 36 222 240 0 0 chr5 192233905 192233955 -10851577 + T-rich Low_complexity Low_complexity 1 50 0 1258 271 97 80 chr5 192234118 192234862 -10850670 - L1ME4a LINE L1 -1 6120 5357 4120 128 17 39 chr5 192234862 192235002 -10850530 - L1PA15 LINE L1 0 6165 6024 2309 115 3 0 chr5 192235002 192235306 -10850226 - AluSp SINE Alu -8 305 1 4120 128 17 39 chr5 192235306 192235913 -10849619 - L1PA15 LINE L1 -141 6024 5434 1258 271 97 80 chr5 192235913 192236146 -10849386 - L1ME4a LINE L1 -764 5357 5129 219 244 0 0 chr5 192236636 192236677 -10848855 + polypyrimidine Low_complexity Low_complexity 5 45 0 320 208 0 0 chr5 192237092 192237164 -10848368 + MER116 DNA Mariner 9 80 0 227 280 120 31 chr5 192237233 192237458 -10848074 - L1ME4a LINE L1 -103 6018 5774 863 269 130 29 chr5 192237697 192238043 -10847489 - L2 LINE L2 0 3313 2933 214 174 0 22 chr5 192238213 192238259 -10847273 - L2 LINE L2 0 3313 3269 315 248 20 50 chr5 192238933 192238951 -10846581 + MIR SINE MIR 47 64 -198 1818 156 0 33 chr5 192238951 192239288 -10846244 - AluJb SINE Alu 0 312 1 315 248 20 50 chr5 192239288 192239370 -10846162 + MIR SINE MIR 64 144 -118 275 206 123 27 chr5 192239372 192239445 -10846087 + MLT1L LTR MaLR 1 80 -535 261 274 116 21 chr5 192239487 192239582 -10845950 + MLT1L LTR MaLR 181 284 -331 723 296 136 14 chr5 192240249 192240668 -10844864 + MLT1L LTR MaLR 145 614 -1 243 73 171 0 chr5 192240893 192240934 -10844598 - MLT2D LTR ERVL 0 464 417 1816 191 59 8 chr5 192240972 192241328 -10844204 - MLT2D LTR ERVL -40 374 1 513 219 13 77 chr5 192241835 192241949 -10843583 + MER5B DNA MER1_type 8 111 -67 2203 117 0 7 chr5 192241949 192242249 -10843283 - AluSx SINE Alu -14 298 1 513 219 13 77 chr5 192242249 192242289 -10843243 + MER5B DNA MER1_type 111 152 -26 970 129 93 10 chr5 192242897 192243090 -10842442 + L1PA16 LINE L1 5958 6166 0 564 177 5 48 chr5 192243119 192243305 -10842227 + GA-rich Low_complexity Low_complexity 3 180 0 442 275 5 31 chr5 192244046 192244205 -10841327 - MIR SINE MIR -62 146 16 235 395 28 0 chr5 192244402 192244511 -10841021 - L2 LINE L2 -10 3262 3151 297 263 109 86 chr5 192245966 192246141 -10839391 - L2 LINE L2 -174 3098 2920 * 390 277 75 13 chr5 192246139 192246298 -10839234 + MIR SINE MIR 36 204 -58 275 265 32 90 chr5 192246340 192246529 -10839003 + L2 LINE L2 2946 3123 -190 303 358 112 3 chr5 192247014 192247310 -10838222 - LTR16C LTR ERVL -28 463 136 440 200 45 36 chr5 192248298 192248408 -10837124 - MLT1J2 LTR MaLR -278 172 62 3335 72 62 6 chr5 192249057 192249542 -10835990 - L1PA8 LINE L1 0 6172 5661 454 292 52 52 chr5 192249819 192250052 -10835480 - Charlie8 DNA MER1_type -2140 277 45 255 125 0 0 chr5 192250120 192250160 -10835372 + (TG)n Simple_repeat Simple_repeat 2 41 0 309 176 15 44 chr5 192250968 192251036 -10834496 - MER96 DNA MER1_type? -93 82 17 863 122 13 39 chr5 192251325 192251481 -10834051 + L1MB7 LINE L1 6014 6165 -19 752 216 75 53 chr5 192252338 192252565 -10832967 - MLT1K LTR MaLR -27 561 330 565 335 32 23 chr5 192252607 192252825 -10832707 - MLT1K LTR MaLR -368 220 1 2163 121 0 0 chr5 192252869 192253174 -10832358 + AluSx SINE Alu 1 305 -7 2695 139 29 2 chr5 192253280 192253725 -10831807 - L1PA16 LINE L1 -1 6165 5709 796 117 36 36 chr5 192254551 192254688 -10830844 - L1PA7 LINE L1 -1870 4276 4140 8230 80 4 7 chr5 192254688 192256539 -10828993 + L1PA7 LINE L1 4278 6132 -22 522 0 0 0 chr5 192256539 192256597 -10828935 + (TA)n Simple_repeat Simple_repeat 1 58 0 8230 80 4 7 chr5 192256597 192256617 -10828915 + L1PA7 LINE L1 6132 6151 -3 406 283 9 9 chr5 192257402 192257508 -10828024 + MIR SINE MIR 18 123 -139 480 307 11 17 chr5 192258210 192258389 -10827143 + CT-rich Low_complexity Low_complexity 2 179 0 612 222 92 92 chr5 192258524 192258692 -10826840 - L1MC4a LINE L1 -157 5964 5792 2339 58 0 7 chr5 192258692 192258987 -10826545 - AluY SINE Alu -18 293 1 612 222 92 92 chr5 192258987 192259080 -10826452 - L1MC4a LINE L1 -328 5793 5701 566 264 97 0 chr5 192259104 192259259 -10826273 - MIR SINE MIR -1 261 92 599 288 108 13 chr5 192259305 192259621 -10825911 - L1MC4a LINE L1 -2199 5609 5264 2177 115 0 3 chr5 192259737 192260050 -10825482 + AluSx SINE Alu 1 312 0 312 267 35 52 chr5 192260203 192260375 -10825157 - L1ME3A LINE L1 -223 5947 5779 1135 294 94 13 chr5 192260395 192261178 -10824354 - L1ME3A LINE L1 -697 5545 4700 813 264 133 79 chr5 192261191 192261431 -10824101 - L1ME3A LINE L1 -2097 4049 3823 294 29 0 0 chr5 192261431 192261466 -10824066 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1821 130 0 7 chr5 192261470 192261747 -10823785 - AluSx SINE Alu -37 275 1 813 264 133 79 chr5 192261747 192262344 -10823188 - L1ME3A LINE L1 -2325 3821 3136 1687 157 26 26 chr5 192262344 192262649 -10822883 - AluJo SINE Alu -7 305 1 813 264 133 79 chr5 192262649 192262856 -10822676 - L1ME3A LINE L1 -3010 3136 2942 846 121 0 0 chr5 192262868 192262992 -10822540 - AluSg/x SINE Alu -16 294 171 180 0 0 0 chr5 192263000 192263020 -10822512 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2044 118 0 0 chr5 192263031 192263319 -10822213 - AluSx SINE Alu -24 288 1 2223 210 73 50 chr5 192263833 192264374 -10821158 - L1ME1 LINE L1 -4 6973 6413 2427 58 0 0 chr5 192264374 192264668 -10820864 - AluY SINE Alu -17 294 1 2223 210 73 50 chr5 192264668 192264787 -10820745 - L1ME1 LINE L1 -564 6413 6298 321 82 0 0 chr5 192264794 192264843 -10820689 + (TA)n Simple_repeat Simple_repeat 1 49 0 454 160 0 0 chr5 192264843 192264918 -10820614 - AluJb SINE Alu -14 298 224 915 125 0 56 chr5 192264918 192264974 -10820558 - AluJb SINE Alu -161 151 93 2466 127 11 19 chr5 192264974 192265352 -10820180 - THE1C LTR MaLR 0 375 1 915 125 0 56 chr5 192265352 192265455 -10820077 - AluJb SINE Alu -219 93 1 6404 199 68 139 chr5 192265455 192265915 -10819617 - L1ME1 LINE L1 -847 6110 5619 1666 158 0 20 chr5 192265915 192266207 -10819325 + AluJb SINE Alu 6 291 -21 6404 199 68 139 chr5 192266207 192266299 -10819233 - L1ME1 LINE L1 -1338 5619 5522 2422 131 97 0 chr5 192266299 192266689 -10818843 + MSTA LTR MaLR 1 428 0 6404 199 68 139 chr5 192266689 192267126 -10818406 - L1ME1 LINE L1 -1435 5522 5055 1950 113 7 26 chr5 192267126 192267428 -10818104 - AluSx SINE Alu -16 296 1 6404 199 68 139 chr5 192267428 192267771 -10817761 - L1ME1 LINE L1 -1902 5055 4689 1640 187 23 0 chr5 192267771 192268076 -10817456 - AluJo SINE Alu 0 312 1 6404 199 68 139 chr5 192268076 192268168 -10817364 - L1ME1 LINE L1 -2268 4689 4592 2108 117 3 0 chr5 192268168 192268466 -10817066 - AluSx SINE Alu -13 299 1 6404 199 68 139 chr5 192268466 192268820 -10816712 - L1ME1 LINE L1 -2365 4592 4214 1121 113 98 34 chr5 192268820 192268912 -10816620 - Tigger1 DNA MER2_type 0 2418 2333 353 96 0 0 chr5 192268912 192268964 -10816568 + L1PA7 LINE L1 6103 6154 0 1121 113 98 34 chr5 192268964 192269075 -10816457 - Tigger1 DNA MER2_type -85 2333 2202 648 138 269 28 chr5 192269045 192269190 -10816342 - Tigger1 DNA MER2_type -2238 180 1 * 6404 199 68 139 chr5 192269190 192270368 -10815164 - L1ME1 LINE L1 -2858 4099 3075 369 0 0 0 chr5 192270368 192270409 -10815123 + (CA)n Simple_repeat Simple_repeat 2 42 0 443 281 8 46 chr5 192270410 192270675 -10814857 + L1M4c LINE L1 1317 1721 -4842 353 175 15 55 chr5 192270696 192270847 -10814685 - L1ME1 LINE L1 -3933 3024 2928 1210 130 76 18 chr5 192270965 192271188 -10814344 + L1M4c LINE L1 311 546 -5838 373 265 122 22 chr5 192271198 192271379 -10814153 - L1ME1 LINE L1 -5330 1808 1610 * 8677 126 61 46 chr5 192271367 192272958 -10812574 - L1M4c LINE L1 -4766 1618 4 386 292 110 59 chr5 192272961 192273268 -10812264 - L1ME1 LINE L1 -5204 1810 1472 216 0 0 0 chr5 192273469 192273493 -10812039 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 357 125 0 0 chr5 192273532 192273588 -10811944 + (TCCC)n Simple_repeat Simple_repeat 3 58 0 2094 114 0 3 chr5 192273588 192273885 -10811647 - AluSp SINE Alu -17 296 1 254 362 116 14 chr5 192274638 192274914 -10810618 + L2 LINE L2 2600 2903 -411 354 61 0 0 chr5 192274972 192275021 -10810511 + (CA)n Simple_repeat Simple_repeat 1 49 0 444 308 23 8 chr5 192275147 192275277 -10810255 + L2 LINE L2 3178 3309 -4 700 302 15 19 chr5 192275442 192275647 -10809885 - MIR SINE MIR -50 212 9 573 196 98 14 chr5 192276375 192276518 -10809014 + MIR3 SINE MIR 33 187 -21 194 370 89 8 chr5 192277026 192277261 -10808271 + L2 LINE L2 2245 2498 -816 230 265 144 19 chr5 192277569 192277657 -10807875 - L1MB8 LINE L1 -208 5970 5894 1698 251 90 16 chr5 192277657 192278168 -10807364 + MLT1H LTR MaLR 1 549 0 230 265 144 19 chr5 192278168 192278349 -10807183 - L1MB8 LINE L1 -284 5894 5664 313 330 46 46 chr5 192278389 192278562 -10806970 + L2 LINE L2 2660 2832 -482 513 268 112 0 chr5 192278587 192278766 -10806766 + MIR SINE MIR 64 262 0 346 301 140 43 chr5 192278827 192279149 -10806383 + L2 LINE L2 2920 3272 0 261 189 274 9 chr5 192279185 192279291 -10806241 - L2 LINE L2 -2 3270 3137 284 239 39 77 chr5 192279500 192279630 -10805902 + L2 LINE L2 3146 3270 -2 183 274 316 0 chr5 192279659 192279776 -10805756 + MIR3 SINE MIR 45 198 -10 489 233 49 164 chr5 192279895 192280182 -10805350 - MIR SINE MIR -1 261 8 478 144 10 10 chr5 192280782 192280879 -10804653 + GA-rich Low_complexity Low_complexity 4 100 0 317 242 118 26 chr5 192281655 192281848 -10803684 + MIR SINE MIR 18 222 -40 294 264 48 130 chr5 192281990 192282198 -10803334 + MIR SINE MIR 37 227 -35 180 0 0 0 chr5 192283023 192283043 -10802489 + (TG)n Simple_repeat Simple_repeat 2 21 0 2259 109 0 0 chr5 192283496 192283807 -10801725 + AluSx SINE Alu 1 311 -1 348 348 30 24 chr5 192283807 192283971 -10801561 - MIR SINE MIR -24 238 74 365 258 204 50 chr5 192284344 192284565 -10800967 + MIR SINE MIR 3 257 -5 1209 291 159 27 chr5 192284831 192285347 -10800185 - MLT1K LTR MaLR -4 584 1 463 296 61 0 chr5 192285363 192285495 -10800037 - MIR SINE MIR -73 189 50 670 23 23 0 chr5 192286343 192286431 -10799101 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 544 331 7 0 chr5 192286442 192286578 -10798954 + L2 LINE L2 3136 3272 0 226 214 0 0 chr5 192286581 192286623 -10798909 + (TGAG)n Simple_repeat Simple_repeat 1 42 0 392 243 237 13 chr5 192286648 192286834 -10798698 + MIR SINE MIR 29 254 -8 210 244 0 0 chr5 192287073 192287118 -10798414 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr5 192288636 192288658 -10796874 + AT_rich Low_complexity Low_complexity 1 22 0 454 308 95 59 chr5 192289406 192289719 -10795813 - L2 LINE L2 -2 3311 2978 1837 155 0 23 chr5 192289719 192290029 -10795503 + AluJo SINE Alu 1 303 -9 454 308 95 59 chr5 192290029 192290137 -10795395 - L2 LINE L2 -335 2978 2875 229 269 13 0 chr5 192290185 192290263 -10795269 + (TTCA)n Simple_repeat Simple_repeat 2 80 0 270 275 25 0 chr5 192290266 192290346 -10795186 - L2 LINE L2 -3 3310 3229 276 204 29 33 chr5 192291046 192291136 -10794396 - MIR SINE MIR -117 91 3 362 115 16 0 chr5 192292434 192292495 -10793037 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 450 208 20 0 chr5 192292523 192292624 -10792908 - L1MC/D LINE L1 -2023 5785 5683 189 244 24 0 chr5 192292632 192292673 -10792859 - L2 LINE L2 -15 3298 3257 21 0 0 0 chr5 192292686 192292707 -10792825 + AT_rich Low_complexity Low_complexity 1 21 0 416 189 0 14 chr5 192293403 192293477 -10792055 + MER117 DNA MER1_type 1 73 -124 1305 202 55 3 chr5 192293483 192293845 -10791687 - Charlie5 DNA MER1_type 0 2624 2244 2001 110 0 14 chr5 192293860 192294176 -10791356 - AluSx SINE Alu 0 312 1 563 175 70 0 chr5 192294178 192294292 -10791240 - MER3 DNA MER1_type -84 125 51 484 66 0 0 chr5 192294656 192294717 -10790815 + AluSp SINE Alu 2 62 -248 1639 72 0 0 chr5 192294717 192294925 -10790607 + AluSp SINE Alu 97 304 -9 322 290 259 0 chr5 192295534 192295665 -10789867 + MIR SINE MIR 3 167 -95 513 254 26 69 chr5 192296067 192296256 -10789276 + MER5A DNA MER1_type 9 189 0 267 307 84 23 chr5 192296599 192296775 -10788757 + L1M1 LINE L1 5622 5810 -493 351 222 71 63 chr5 192297003 192297129 -10788403 + L1MC5 LINE L1 7804 7930 -31 2226 48 41 7 chr5 192297175 192297467 -10788065 + AluY SINE Alu 1 302 -9 276 322 43 17 chr5 192298101 192298216 -10787316 + MIR SINE MIR 29 146 -62 1179 247 49 38 chr5 192299317 192299682 -10785850 + L1ME3 LINE L1 5793 6161 -1 554 308 119 43 chr5 192299690 192300253 -10785279 + L2 LINE L2 2688 3286 -27 494 275 35 14 chr5 192300433 192300575 -10784957 + MLT1K LTR MaLR 396 540 -48 765 217 0 0 chr5 192300814 192300994 -10784538 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 281 294 8 0 chr5 192301014 192301140 -10784392 + (TGGA)n Simple_repeat Simple_repeat 3 129 0 * 577 229 6 17 chr5 192301120 192301299 -10784233 + (TGGG)n Simple_repeat Simple_repeat 3 179 0 364 246 160 8 chr5 192301470 192301640 -10783892 - MIR3 SINE MIR -73 135 3 311 300 152 42 chr5 192302231 192302468 -10783064 + L2 LINE L2 2921 3183 -89 441 264 91 0 chr5 192302995 192303124 -10782408 + MIR SINE MIR 104 245 -17 186 43 0 0 chr5 192303384 192303407 -10782125 + (GA)n Simple_repeat Simple_repeat 1 23 0 662 61 20 0 chr5 192304109 192304207 -10781325 - HSMAR2 DNA Mariner -1 1301 1202 1124 134 0 82 chr5 192304218 192304412 -10781120 - FRAM SINE Alu 0 176 1 3956 119 3 4 chr5 192304413 192305161 -10780371 - HSMAR2 DNA Mariner -90 1212 406 1244 96 0 50 chr5 192305159 192305357 -10780175 - Tigger2a DNA MER2_type -246 188 1 * 2341 104 0 13 chr5 192305424 192305732 -10779800 - AluSx SINE Alu -8 304 1 461 262 20 7 chr5 192306003 192306152 -10779380 - L1ME3A LINE L1 -281 5889 5739 704 293 96 3 chr5 192306165 192306500 -10779032 - L1ME3A LINE L1 -512 5658 5293 * 1354 193 46 76 chr5 192306480 192306697 -10778835 - L1M4 LINE L1 -2833 3313 3091 1783 179 3 35 chr5 192306697 192307010 -10778522 - AluJb SINE Alu -9 303 1 1354 193 46 76 chr5 192307010 192307170 -10778362 - L1M4 LINE L1 -3055 3091 2928 2417 95 3 0 chr5 192307170 192307474 -10778058 - AluSp SINE Alu -8 305 1 1354 193 46 76 chr5 192307474 192307664 -10777868 - L1M4 LINE L1 -3218 2928 2762 * 3941 233 68 37 chr5 192307659 192308816 -10776716 - L1MC4a LINE L1 0 7808 6605 266 50 25 0 chr5 192308816 192308856 -10776676 + (CA)n Simple_repeat Simple_repeat 2 42 0 3941 233 68 37 chr5 192308856 192308995 -10776537 - L1MC4a LINE L1 -1203 6605 6472 386 292 85 31 chr5 192309108 192309652 -10775880 - L1ME3A LINE L1 -2841 3305 2733 289 294 22 68 chr5 192309802 192310214 -10775318 - L1ME3A LINE L1 -3622 2524 2132 230 223 107 9 chr5 192310346 192310458 -10775074 - L1M4 LINE L1 -833 5313 5191 302 160 0 0 chr5 192310462 192310512 -10775020 - MER66B LTR ERV1 -139 347 298 535 314 45 73 chr5 192311357 192311644 -10773888 + L2 LINE L2 2994 3272 0 260 253 76 25 chr5 192311757 192311836 -10773696 + MIR SINE MIR 168 250 -12 542 248 154 57 chr5 192312272 192312544 -10772988 + L2 LINE L2 2714 2958 -355 2198 142 3 0 chr5 192312544 192312853 -10772679 - AluSx SINE Alu -2 310 1 542 248 154 57 chr5 192312853 192313074 -10772458 + L2 LINE L2 2958 3303 -10 217 368 29 29 chr5 192313631 192313767 -10771765 + MIR3 SINE MIR 1 136 -72 445 288 158 11 chr5 192314485 192314662 -10770870 - MIR SINE MIR -11 251 49 343 205 27 98 chr5 192315457 192315488 -10770044 - MIR SINE MIR -79 183 151 2320 111 0 0 chr5 192315488 192315785 -10769747 - AluSx SINE Alu -15 297 1 343 205 27 98 chr5 192315785 192315865 -10769667 - MIR SINE MIR -111 151 80 1797 196 102 9 chr5 192315952 192316375 -10769157 + MLT1C LTR MaLR 6 467 0 438 316 40 34 chr5 192316381 192316558 -10768974 - MIR SINE MIR -73 189 12 309 325 45 26 chr5 192316561 192316715 -10768817 - MER5B DNA MER1_type -4 174 18 243 385 0 8 chr5 192317088 192317210 -10768322 - MIR SINE MIR -55 153 33 191 301 8 57 chr5 192317410 192317533 -10767999 - MIR SINE MIR -119 143 27 375 354 69 0 chr5 192318782 192318957 -10766575 + MIR SINE MIR 33 219 -43 1098 166 184 15 chr5 192319152 192319546 -10765986 + MER31A LTR ERV1 1 543 0 200 203 0 68 chr5 192320643 192320702 -10764830 + C-rich Low_complexity Low_complexity 5 59 0 380 187 13 13 chr5 192320821 192320896 -10764636 - MIR SINE MIR -70 192 118 301 331 109 11 chr5 192321203 192321378 -10764154 - MIR SINE MIR -15 247 56 198 345 149 0 chr5 192321912 192321999 -10763533 + MIR SINE MIR 23 122 -86 261 244 0 0 chr5 192322431 192322517 -10763015 + (CCA)n Simple_repeat Simple_repeat 1 86 0 2048 120 20 3 chr5 192322628 192322920 -10762612 + AluSx SINE Alu 1 297 -15 1273 258 19 4 chr5 192322942 192323372 -10762160 - LTR16C LTR ERVL 0 491 2 281 307 17 0 chr5 192323444 192323683 -10761849 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 229 313 0 0 chr5 192324845 192324912 -10760620 + (TG)n Simple_repeat Simple_repeat 2 68 0 317 333 122 57 chr5 192324999 192325401 -10760131 + L2 LINE L2 2845 3272 0 840 135 0 0 chr5 192325405 192325553 -10759979 + (TGGA)n Simple_repeat Simple_repeat 3 150 0 273 232 56 80 chr5 192326589 192326714 -10758818 + MIR3 SINE MIR 3 124 -84 373 320 80 27 chr5 192327096 192327321 -10758211 - MIR SINE MIR -12 250 14 318 233 67 0 chr5 192328575 192328665 -10756867 - L1ME LINE L1 -297 5824 5729 380 296 111 40 chr5 192328703 192328929 -10756603 - L1ME LINE L1 -477 5644 5403 297 163 0 0 chr5 192328944 192328993 -10756539 - L2 LINE L2 0 3313 3265 2192 103 7 7 chr5 192329624 192329914 -10755618 - AluSc SINE Alu -19 290 1 209 289 58 66 chr5 192329979 192330100 -10755432 - MIR SINE MIR -123 139 20 234 317 75 21 chr5 192330525 192330711 -10754821 + L2 LINE L2 2469 2664 -650 224 229 37 9 chr5 192331237 192331314 -10754218 - MIR SINE MIR -71 191 113 272 284 78 43 chr5 192331537 192331653 -10753879 - MIR SINE MIR -59 149 30 207 211 0 39 chr5 192331813 192331865 -10753667 + L2 LINE L2 3264 3313 0 326 343 28 0 chr5 192331936 192332044 -10753488 - MIR SINE MIR -82 180 70 293 300 108 8 chr5 192332629 192332749 -10752783 + MIR SINE MIR 20 151 -111 1377 167 0 0 chr5 192333734 192333944 -10751588 + AluSg/x SINE Alu 94 303 -9 259 118 0 39 chr5 192333988 192334039 -10751493 - L1MC/D LINE L1 -2030 5778 5730 645 263 6 0 chr5 192334065 192334221 -10751311 - L1MD1 LINE L1 -8 6234 6078 * 720 232 55 32 chr5 192334218 192334425 -10751107 - L1MD2 LINE L1 -213 6146 5932 260 53 26 0 chr5 192334425 192334463 -10751069 + (TA)n Simple_repeat Simple_repeat 2 40 0 720 232 55 32 chr5 192334463 192334475 -10751057 - L1MD2 LINE L1 -427 5932 5922 1005 204 26 15 chr5 192334585 192334850 -10750682 + MER33 DNA MER1_type 35 302 -22 206 299 238 14 chr5 192335038 192335185 -10750347 + MIR SINE MIR 6 185 -77 1996 123 4 0 chr5 192335295 192335564 -10749968 - AluSx SINE Alu -42 270 1 574 277 65 0 chr5 192335591 192335746 -10749786 + MIR SINE MIR 42 206 -56 896 275 77 21 chr5 192336145 192336472 -10749060 + LTR16C LTR ERVL 67 411 -80 380 276 158 27 chr5 192336726 192336947 -10748585 + MLT1L LTR MaLR 269 524 -70 575 228 59 7 chr5 192337327 192337463 -10748069 - MIR SINE MIR -101 161 19 836 68 0 8 chr5 192338194 192338311 -10747221 + (TTTCC)n Simple_repeat Simple_repeat 3 118 0 2193 135 3 0 chr5 192338311 192338608 -10746924 - AluSx SINE Alu -14 298 1 732 172 43 116 chr5 192338822 192339054 -10746478 + MLT1D LTR MaLR 1 215 -175 295 279 39 10 chr5 192339206 192339310 -10746222 + MIR SINE MIR 81 187 -75 666 264 109 62 chr5 192339325 192339647 -10745885 + MER102b DNA MER1_type 1 337 -4 652 283 23 0 chr5 192340145 192340322 -10745210 + MIR SINE MIR 51 231 -31 285 302 40 13 chr5 192340755 192340904 -10744628 - MER20B DNA MER1_type -596 187 35 380 352 28 23 chr5 192340963 192341139 -10744393 + MIR SINE MIR 74 250 -12 846 266 19 30 chr5 192342002 192342265 -10743267 + MIR SINE MIR 2 261 -1 236 376 32 0 chr5 192342307 192342400 -10743132 - MIR SINE MIR -77 131 36 185 279 117 63 chr5 192343344 192343455 -10742077 + MIR SINE MIR 132 248 -14 265 135 77 0 chr5 192343670 192343722 -10741810 + L2 LINE L2 3173 3228 -85 342 272 67 0 chr5 192343907 192344017 -10741515 - MIR SINE MIR -62 146 41 208 345 214 18 chr5 192344021 192344189 -10741343 - L2 LINE L2 0 3272 3072 376 282 79 22 chr5 192344233 192344460 -10741072 - L2 LINE L2 -527 2787 2548 393 274 65 107 chr5 192344731 192345143 -10740389 - MLT1I LTR MaLR -14 395 1 240 216 59 0 chr5 192345229 192345280 -10740252 - MIR SINE MIR -109 153 100 337 321 75 25 chr5 192345405 192345525 -10740007 + MIR SINE MIR 43 167 -65 316 200 17 96 chr5 192345723 192345838 -10739694 + MIR SINE MIR 39 144 -118 324 48 0 0 chr5 192346053 192346095 -10739437 + (TG)n Simple_repeat Simple_repeat 2 43 0 337 296 3 43 chr5 192346439 192346691 -10738841 + GA-rich Low_complexity Low_complexity 1 241 0 248 310 86 9 chr5 192347070 192347186 -10738346 + MIR SINE MIR 28 152 -110 307 195 39 13 chr5 192347321 192347398 -10738134 + Charlie8 DNA MER1_type 71 149 -2268 340 305 116 60 chr5 192348106 192348424 -10737108 - L2 LINE L2 -100 3172 2837 357 295 31 8 chr5 192348507 192348636 -10736896 - L2 LINE L2 -557 2757 2626 209 221 29 59 chr5 192348812 192348880 -10736652 - L2 LINE L2 0 3272 3207 1308 186 14 0 chr5 192349151 192349372 -10736160 - MER58A DNA MER1_type 0 224 1 879 277 102 2 chr5 192349410 192349803 -10735729 - LTR33 LTR ERVL 0 521 90 205 280 0 86 chr5 192349876 192349969 -10735563 - MIR SINE MIR -111 97 13 411 260 39 24 chr5 192350055 192350182 -10735350 + MIR SINE MIR 18 146 -62 373 315 39 11 chr5 192350202 192350383 -10735149 + MER5A DNA MER1_type 1 186 -3 285 339 109 24 chr5 192350446 192350657 -10734875 - MIR SINE MIR -8 254 20 532 247 132 6 chr5 192351360 192351534 -10733998 + MER117 DNA MER1_type 2 197 0 567 190 5 117 chr5 192351777 192351982 -10733550 + L2 LINE L2 3127 3308 -5 1812 129 0 95 chr5 192352176 192352502 -10733030 + AluSx SINE Alu 1 295 -17 1124 299 70 48 chr5 192353463 192353654 -10731878 - L1MEc LINE L1 -3462 2753 2568 1902 103 53 13 chr5 192353654 192353954 -10731578 - AluSx SINE Alu 0 312 1 1124 299 70 48 chr5 192353954 192354676 -10730856 - L1MEc LINE L1 -3647 2568 1863 1938 164 113 23 chr5 192354676 192354999 -10730533 - Tigger2a DNA MER2_type -2274 434 67 2332 68 0 19 chr5 192354999 192355306 -10730226 - AluY SINE Alu -10 301 1 1938 164 113 23 chr5 192355306 192355379 -10730153 - Tigger2a DNA MER2_type -2641 67 2 1124 299 70 48 chr5 192355379 192356347 -10729185 - L1MEc LINE L1 -4352 1863 857 2025 135 0 0 chr5 192356361 192356657 -10728875 - AluSx SINE Alu -16 296 1 3564 38 2 0 chr5 192357527 192357996 -10727536 + L1PA4 LINE L1 5716 6185 0 4179 217 82 19 chr5 192358132 192358704 -10726828 - MER69B DNA AcHobo -1370 1156 621 279 0 0 0 chr5 192358704 192358735 -10726797 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4179 217 82 19 chr5 192358735 192358956 -10726576 - MER69B DNA AcHobo -1905 621 415 2143 90 36 0 chr5 192358956 192359257 -10726275 + AluSx SINE Alu 1 312 0 4179 217 82 19 chr5 192359257 192359541 -10725991 - MER69B DNA AcHobo -2111 415 10 354 304 9 4 chr5 192359543 192359652 -10725880 - MIR SINE MIR -72 136 44 24 32 0 0 chr5 192361679 192361710 -10723822 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr5 192363365 192363401 -10722131 + AT_rich Low_complexity Low_complexity 1 36 0 540 277 8 94 chr5 192363451 192363707 -10721825 - MIR SINE MIR 0 262 29 2420 154 27 105 chr5 192363748 192364340 -10721192 - L1MC3 LINE L1 -8 7777 7232 2078 133 0 0 chr5 192364995 192365297 -10720235 - AluSx SINE Alu -10 302 1 6591 134 15 12 chr5 192365310 192366459 -10719073 - L1MC1 LINE L1 0 6333 5184 701 254 46 10 chr5 192366466 192366663 -10718869 + Charlie8 DNA MER1_type 72 275 -2142 336 221 15 0 chr5 192366705 192366773 -10718759 + Charlie8 DNA MER1_type 2340 2408 -9 577 292 92 18 chr5 192366843 192367078 -10718454 - MIR SINE MIR -3 259 10 1730 128 80 7 chr5 192368076 192368365 -10717167 - AluJb SINE Alu -2 310 1 275 245 0 0 chr5 192368389 192368442 -10717090 + L2 LINE L2 3261 3313 0 311 133 0 0 chr5 192368717 192368762 -10716770 + L2 LINE L2 3249 3293 -20 270 310 11 11 chr5 192368959 192369046 -10716486 - L2 LINE L2 0 3313 3227 273 289 26 0 chr5 192369087 192369163 -10716369 - L2 LINE L2 0 3272 3195 473 235 11 104 chr5 192369294 192369477 -10716055 + MIR SINE MIR 63 228 -34 356 297 130 51 chr5 192370374 192370667 -10714865 - MER102b DNA MER1_type 0 341 26 295 326 0 11 chr5 192370709 192370804 -10714728 + MIR SINE MIR 67 160 -102 238 281 43 115 chr5 192370863 192371002 -10714530 - MIR SINE MIR -10 252 124 858 232 217 32 chr5 192371289 192371763 -10713769 + L1ME4a LINE L1 5555 6116 -5 441 194 56 9 chr5 192371873 192371981 -10713551 + L1ME4a LINE L1 5974 6086 -35 197 291 63 63 chr5 192372980 192373059 -10712473 - MIR SINE MIR -76 186 108 416 261 111 39 chr5 192373676 192373829 -10711703 + MIR SINE MIR 82 245 -17 410 366 118 20 chr5 192374332 192374586 -10710946 + L1MC/D LINE L1 5309 5587 -2221 232 288 16 24 chr5 192374634 192374759 -10710773 + L1M4 LINE L1 4942 5065 -1081 474 221 39 0 chr5 192374759 192374863 -10710669 + MIR SINE MIR 65 172 -90 1229 237 109 19 chr5 192374905 192375276 -10710256 + MLT1J2 LTR MaLR 43 401 -8 838 250 42 41 chr5 192375879 192376232 -10709300 + MLT1L LTR MaLR 1 372 -216 981 258 59 78 chr5 192377067 192377615 -10707917 + LTR33A LTR ERVL 17 523 0 713 167 82 142 chr5 192378008 192378241 -10707291 - MER20 DNA MER1_type 0 219 1 309 267 10 50 chr5 192378249 192378350 -10707182 + Charlie8 DNA MER1_type 103 199 -2218 1524 263 45 13 chr5 192378381 192378757 -10706775 - MLT1E LTR MaLR 0 593 206 294 50 0 0 chr5 192378764 192378804 -10706728 + (GA)n Simple_repeat Simple_repeat 2 41 0 533 267 78 33 chr5 192378827 192379007 -10706525 - MLT1E LTR MaLR -344 198 11 1864 217 62 14 chr5 192379009 192379447 -10706085 - MLT1C LTR MaLR 0 467 9 1509 162 58 37 chr5 192379929 192380256 -10705276 + L1MD3 LINE L1 7660 7993 -2 378 0 0 0 chr5 192380657 192380699 -10704833 + (CA)n Simple_repeat Simple_repeat 2 43 0 457 277 31 44 chr5 192381440 192381599 -10703933 - MIR3 SINE MIR -18 190 34 289 365 29 0 chr5 192381885 192382022 -10703510 + MIR SINE MIR 50 190 -72 358 164 0 0 chr5 192382387 192382448 -10703084 + HsTC2 DNA Tc2 1838 1898 0 277 267 80 71 chr5 192382611 192382836 -10702696 - MLT1K LTR MaLR -163 425 199 759 236 118 0 chr5 192383197 192383392 -10702140 - MIR SINE MIR -2 260 43 461 295 0 8 chr5 192383623 192383752 -10701780 - MIR SINE MIR -118 144 17 438 263 0 42 chr5 192384217 192384335 -10701197 - MIR SINE MIR -133 129 17 184 309 25 25 chr5 192384362 192384443 -10701089 - L2 LINE L2 -66 3247 3167 1135 273 42 70 chr5 192384547 192385046 -10700486 - MLT1K LTR MaLR -20 568 84 230 342 77 13 chr5 192385419 192385574 -10699958 + MIR SINE MIR 98 262 0 183 186 0 0 chr5 192386291 192386334 -10699198 + A-rich Low_complexity Low_complexity 1 43 0 2240 93 0 3 chr5 192387082 192387395 -10698137 + AluSx SINE Alu 1 312 0 699 277 73 5 chr5 192387434 192387654 -10697878 - MIR SINE MIR -26 236 2 450 220 15 8 chr5 192388087 192388219 -10697313 + L2 LINE L2 2853 2985 -328 2038 76 0 4 chr5 192388231 192388495 -10697037 + AluSg SINE Alu 32 294 -16 190 171 0 29 chr5 192388944 192388979 -10696553 - MIR SINE MIR -139 69 36 288 281 113 19 chr5 192389014 192389174 -10696358 - L2 LINE L2 -270 3002 2828 385 257 109 46 chr5 192390045 192390220 -10695312 + MIR SINE MIR 33 218 -44 280 83 0 0 chr5 192390225 192390261 -10695271 + Alu SINE Alu 2 37 -265 254 309 0 0 chr5 192390491 192390559 -10694973 + MIR SINE MIR 86 153 -109 672 280 11 0 chr5 192390991 192391166 -10694366 - MER45A DNA AcHobo -1 177 1 326 146 0 0 chr5 192391863 192391918 -10693614 - MLT2D LTR ERVL -3 512 458 762 49 61 38 chr5 192391949 192392884 -10692648 + (TAGA)n Simple_repeat Simple_repeat 1 956 0 1663 205 27 21 chr5 192392914 192392945 -10692587 - MLT2D LTR ERVL -39 425 396 944 38 22 49 chr5 192392945 192393130 -10692402 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1663 205 27 21 chr5 192393130 192393485 -10692047 - MLT2D LTR ERVL -68 396 3 465 127 13 13 chr5 192393784 192393863 -10691669 - MER116 DNA Mariner 0 80 2 284 277 23 37 chr5 192394107 192394245 -10691287 + MIR SINE MIR 16 153 -55 184 238 0 0 chr5 192394470 192394512 -10691020 + L2 LINE L2 3221 3262 -10 602 242 99 47 chr5 192394529 192394740 -10690792 - MIR SINE MIR -27 235 14 295 220 170 20 chr5 192395040 192395140 -10690392 - MIR SINE MIR -63 145 31 837 180 60 44 chr5 192395282 192395465 -10690067 + MIR SINE MIR 53 238 -24 377 331 21 0 chr5 192396257 192396399 -10689133 - L2 LINE L2 -213 3059 2915 439 238 49 49 chr5 192396520 192396663 -10688869 - MIR3 SINE MIR -33 175 33 1533 139 20 4 chr5 192396682 192396927 -10688605 - AluSx SINE Alu -63 249 1 201 365 51 6 chr5 192396977 192397133 -10688399 - L2 LINE L2 -512 2802 2640 256 277 151 82 chr5 192397190 192397555 -10687977 + L2 LINE L2 2834 3223 -49 1069 116 12 0 chr5 192398007 192398268 -10687264 + (TGGA)n Simple_repeat Simple_repeat 1 264 0 445 252 47 64 chr5 192398780 192399012 -10686520 - MIR SINE MIR -6 256 30 257 118 20 0 chr5 192399372 192399423 -10686109 + T-rich Low_complexity Low_complexity 5 56 0 457 249 11 43 chr5 192399974 192400159 -10685373 + (TG)n Simple_repeat Simple_repeat 1 179 0 336 282 54 34 chr5 192400484 192400633 -10684899 + MIR SINE MIR 1 152 -110 242 305 212 8 chr5 192400744 192400862 -10684670 - MIR SINE MIR -92 170 29 193 164 164 55 chr5 192400897 192400952 -10684580 + MER5A DNA MER1_type 102 162 -27 305 235 44 0 chr5 192401251 192401319 -10684213 + L3 LINE CR1 1379 1449 -128 297 330 46 18 chr5 192401436 192401545 -10683987 - L2 LINE L2 -11 3302 3191 930 199 90 0 chr5 192401756 192401957 -10683575 - MER20 DNA MER1_type 0 219 1 258 81 0 0 chr5 192403324 192403361 -10682171 + (CA)n Simple_repeat Simple_repeat 2 38 0 340 136 0 58 chr5 192403939 192404042 -10681490 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 259 261 182 19 chr5 192405184 192405337 -10680195 + MIR SINE MIR 17 183 -69 1547 264 57 16 chr5 192406038 192406463 -10679069 + MLT1K LTR MaLR 134 575 -13 420 348 78 45 chr5 192406470 192406985 -10678547 + L2 LINE L2 1019 1550 -1764 218 242 19 42 chr5 192406998 192407102 -10678430 + MIR SINE MIR 29 98 -110 303 273 15 0 chr5 192407622 192407688 -10677844 + MIR SINE MIR 79 145 -63 702 181 208 0 chr5 192408187 192408331 -10677201 + MER96 DNA MER1_type 2 175 0 441 250 28 0 chr5 192408442 192408550 -10676982 - Charlie8 DNA MER1_type -2191 226 116 1124 115 17 0 chr5 192408557 192408731 -10676801 + L1MA8 LINE L1 6113 6289 -2 1011 149 102 68 chr5 192409498 192409793 -10675739 - MER33 DNA MER1_type 0 324 20 199 335 161 0 chr5 192409838 192409993 -10675539 + MIR SINE MIR 74 253 -9 811 180 0 0 chr5 192410152 192410280 -10675252 + FLAM_A SINE Alu 1 128 -5 441 200 0 0 chr5 192410415 192410490 -10675042 - FLAM_A SINE Alu -67 75 1 507 271 65 92 chr5 192410809 192411313 -10674219 - L1ME4a LINE L1 -18 6103 5721 2416 81 0 0 chr5 192411314 192411622 -10673910 - AluY SINE Alu -3 308 1 1240 206 17 131 chr5 192411703 192412115 -10673417 + MLT1A1 LTR MaLR 1 365 0 463 346 100 16 chr5 192412408 192413148 -10672384 - L2 LINE L2 -5 3308 2439 377 215 83 16 chr5 192413350 192413471 -10672061 - MER103 DNA DNA -1 165 37 315 71 0 0 chr5 192413651 192413693 -10671839 + (CA)n Simple_repeat Simple_repeat 2 43 0 1533 202 17 7 chr5 192413757 192414049 -10671483 - MER66B LTR ERV1 -191 295 1 412 310 134 41 chr5 192414202 192414840 -10670692 + L2 LINE L2 2614 3309 -4 1246 240 31 44 chr5 192414928 192415311 -10670221 - MLT2C1 LTR ERVL -19 378 1 268 193 24 72 chr5 192415409 192415437 -10670095 + MIR SINE MIR 66 94 -168 1595 197 73 28 chr5 192415437 192415864 -10669668 + MLT1J1 LTR MaLR 1 446 0 268 193 24 72 chr5 192415864 192415918 -10669614 + MIR SINE MIR 94 144 -118 1092 326 86 7 chr5 192415987 192416404 -10669128 - MLT1J LTR MaLR -58 453 4 427 317 32 8 chr5 192416928 192417051 -10668481 - MIR SINE MIR -62 146 21 452 276 119 5 chr5 192417108 192417293 -10668239 + MLT1K LTR MaLR 26 231 -357 343 317 40 10 chr5 192417949 192418050 -10667482 - L2 LINE L2 -21 3251 3148 471 286 88 18 chr5 192418297 192418514 -10667018 - LTR33 LTR ERVL 0 521 290 234 331 60 15 chr5 192418549 192418682 -10666850 + L2 LINE L2 2222 2360 -954 3197 218 59 25 chr5 192418904 192420029 -10665503 + L1ME2 LINE L1 5013 6334 0 575 237 63 147 chr5 192420454 192420931 -10664601 + MLT1J LTR MaLR 30 466 -45 187 250 29 73 chr5 192421006 192421074 -10664458 - L3 LINE CR1 -395 1182 1118 213 39 0 0 chr5 192421291 192421317 -10664215 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1868 94 0 4 chr5 192421325 192421580 -10663952 - AluSg1 SINE Alu -55 254 1 362 204 106 153 chr5 192422170 192422405 -10663127 + LTR67 LTR ERVL 2 225 -332 283 279 93 47 chr5 192422572 192422701 -10662831 - MIR3 SINE MIR -59 149 15 370 249 30 107 chr5 192422943 192423140 -10662392 - MLT1H LTR MaLR -8 541 360 381 277 87 60 chr5 192423779 192423963 -10661569 - MIR SINE MIR -18 244 56 1582 156 0 69 chr5 192424424 192424757 -10660775 - AluJb SINE Alu -2 310 1 393 189 153 18 chr5 192425161 192425272 -10660260 - MLT1K LTR MaLR -16 572 447 1958 73 25 22 chr5 192425731 192426005 -10659527 - AluSg SINE Alu -32 278 4 232 281 56 0 chr5 192426025 192426114 -10659418 + HsTC2 DNA Tc2 1801 1894 -4 440 254 52 8 chr5 192426208 192426342 -10659190 - MIR SINE MIR -1 261 122 434 251 162 5 chr5 192427705 192427903 -10657629 - MIR SINE MIR -33 229 6 201 344 0 56 chr5 192427990 192428080 -10657452 + L2 LINE L2 3115 3199 -73 477 340 76 18 chr5 192428195 192428524 -10657008 + MLT1L LTR MaLR 148 495 -120 456 242 114 27 chr5 192428524 192428673 -10656859 - L2 LINE L2 0 3313 3152 6087 265 99 27 chr5 192428719 192429263 -10656269 + L1ME2 LINE L1 46 549 -5531 2226 93 0 0 chr5 192429263 192429554 -10655978 + AluY SINE Alu 1 291 -20 6087 265 99 27 chr5 192429554 192433170 -10652362 + L1ME2 LINE L1 549 4554 -1526 1116 155 72 10 chr5 192433193 192433387 -10652145 - MLT1A1 LTR MaLR -159 206 1 488 207 89 84 chr5 192433389 192433592 -10651940 + L1ME2 LINE L1 4711 4914 -1166 2324 203 22 88 chr5 192433592 192434312 -10651220 + L1ME2 LINE L1 5145 5818 -280 2146 235 73 45 chr5 192434291 192434863 -10650669 + L1MC4 LINE L1 7255 7810 -166 * 192 77 0 0 chr5 192434863 192434889 -10650643 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 2146 235 73 45 chr5 192434889 192434950 -10650582 + L1MC4 LINE L1 7810 7868 -108 197 33 33 0 chr5 192434950 192434980 -10650552 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2240 61 92 0 chr5 192434980 192435275 -10650257 - L1PA6 LINE L1 -12 6142 5821 2146 235 73 45 chr5 192435275 192435328 -10650204 + L1MC4 LINE L1 7867 7962 -14 1914 126 0 3 chr5 192435340 192435626 -10649906 + AluJb SINE Alu 12 296 -16 519 123 0 0 chr5 192436145 192436218 -10649314 + AluJ/FRAM SINE Alu 216 288 -24 371 335 142 28 chr5 192436253 192436605 -10648927 - MLT1K LTR MaLR -7 581 190 1724 252 41 37 chr5 192436781 192437316 -10648216 + MLT1H LTR MaLR 1 537 -12 2270 105 0 3 chr5 192437483 192437796 -10647736 + AluSq SINE Alu 1 312 -1 1924 131 10 16 chr5 192438612 192438924 -10646608 + AluJo SINE Alu 1 310 -2 638 310 75 9 chr5 192439541 192439767 -10645765 + MIR SINE MIR 21 261 -1 290 167 0 37 chr5 192440409 192440463 -10645069 + MIR SINE MIR 70 122 -86 457 321 32 61 chr5 192441520 192441797 -10643735 - L2 LINE L2 0 3313 3045 266 326 50 27 chr5 192441814 192442035 -10643497 + L2 LINE L2 2873 3098 -174 224 323 65 0 chr5 192442864 192442957 -10642575 - L2 LINE L2 -26 3287 3189 421 296 70 57 chr5 192442970 192443079 -10642453 - MIR SINE MIR -2 260 154 2697 97 92 0 chr5 192443079 192443471 -10642061 - MSTC LTR MaLR 0 428 1 421 296 70 57 chr5 192443471 192443591 -10641941 - MIR SINE MIR -108 154 28 439 319 0 33 chr5 192443735 192443917 -10641615 - MIR SINE MIR -59 203 28 2094 108 0 0 chr5 192444208 192444487 -10641045 + AluSx SINE Alu 1 279 -33 423 0 0 0 chr5 192444487 192444534 -10640998 + (CA)n Simple_repeat Simple_repeat 1 47 0 341 333 8 0 chr5 192444759 192444879 -10640653 - MIR SINE MIR -70 192 72 * 436 275 147 61 chr5 192444869 192444988 -10640544 + L2 LINE L2 2697 2804 -468 2100 112 0 3 chr5 192444988 192445282 -10640250 - AluSx SINE Alu -19 293 1 436 275 147 61 chr5 192445282 192445508 -10640024 + L2 LINE L2 2804 3080 -192 507 256 142 88 chr5 192446532 192446806 -10638726 - MLT1K LTR MaLR -285 303 15 663 292 16 16 chr5 192447065 192447250 -10638282 + MIR SINE MIR 46 230 -32 615 71 0 0 chr5 192447264 192447349 -10638183 + (ATG)n Simple_repeat Simple_repeat 1 85 0 220 187 67 40 chr5 192447413 192447488 -10638044 - L3 LINE CR1 -3 1574 1498 * 232 261 140 51 chr5 192447470 192447627 -10637905 - MIR SINE MIR -77 185 15 291 167 0 83 chr5 192448406 192448466 -10637066 + MLT1L LTR MaLR 1 55 -560 1004 286 32 0 chr5 192448624 192448907 -10636625 + MLT1L LTR MaLR 322 613 -2 237 266 0 38 chr5 192448994 192449073 -10636459 + MLT1K LTR MaLR 187 262 -326 813 235 88 13 chr5 192449467 192449705 -10635827 - MIR SINE MIR -4 258 3 322 281 26 53 chr5 192449830 192449944 -10635588 - L2 LINE L2 -196 3076 2966 2165 163 11 3 chr5 192449944 192450294 -10635238 - MLT1A1 LTR MaLR 0 365 13 798 266 50 37 chr5 192450311 192450781 -10634751 - LTR67 LTR ERVL -2 555 2 789 223 114 10 chr5 192452154 192452347 -10633185 + MER20 DNA MER1_type 4 216 -3 278 288 75 12 chr5 192453309 192453469 -10632063 + L2 LINE L2 2909 3078 -194 269 225 42 28 chr5 192453759 192453830 -10631702 + LTR67 LTR ERVL 101 172 -385 * 501 249 226 33 chr5 192453802 192454103 -10631429 + MLT1L LTR MaLR 203 561 -54 711 250 27 23 chr5 192454105 192454325 -10631207 - MER112 DNA MER1_type -8 252 32 368 324 88 0 chr5 192454970 192455106 -10630426 + L2 LINE L2 3109 3256 -16 1717 21 0 0 chr5 192455189 192455380 -10630152 + L1P2 LINE L1 5577 5767 -387 22 0 0 0 chr5 192455384 192455406 -10630126 + AT_rich Low_complexity Low_complexity 1 22 0 431 244 49 34 chr5 192455406 192455611 -10629921 + L1M4 LINE L1 2271 2478 -3668 2608 41 136 0 chr5 192455616 192455955 -10629577 + L1PA5 LINE L1 5770 6154 0 579 245 56 0 chr5 192456677 192456820 -10628712 + L1ME3 LINE L1 6012 6162 0 276 191 0 0 chr5 192456910 192456957 -10628575 - L2 LINE L2 -13 3259 3213 2090 152 10 0 chr5 192457085 192457394 -10628138 - AluSx SINE Alu 0 312 1 291 211 42 28 chr5 192457725 192457796 -10627736 + LTR67 LTR ERVL 101 172 -385 * 321 235 41 20 chr5 192457738 192457836 -10627696 + MLT1J LTR MaLR 110 209 -302 911 196 6 0 chr5 192457899 192458078 -10627454 + L1MB4 LINE L1 6000 6179 -1 360 235 55 80 chr5 192458948 192459148 -10626384 + L1M4 LINE L1 2289 2483 -3663 1014 164 0 40 chr5 192459203 192459380 -10626152 + FRAM SINE Alu 1 168 -8 560 266 112 4 chr5 192459383 192459661 -10625871 + L1M4 LINE L1 2512 2819 -3327 506 297 61 13 chr5 192459687 192459916 -10625616 + L2 LINE L2 3073 3312 -1 1133 323 90 21 chr5 192460001 192460533 -10624999 - MLT1K LTR MaLR -3 585 17 570 276 45 50 chr5 192461192 192461413 -10624119 + MLT1K LTR MaLR 23 242 -346 234 241 0 0 chr5 192462289 192462343 -10623189 + L1M4 LINE L1 1043 1096 -5446 396 179 48 12 chr5 192462382 192462466 -10623066 + MLT1K LTR MaLR 502 588 0 1847 206 8 25 chr5 192462643 192463011 -10622521 - MLT1A1 LTR MaLR -3 362 1 301 230 70 40 chr5 192463199 192463299 -10622233 - MIR SINE MIR -73 135 33 235 333 0 0 chr5 192463320 192463416 -10622116 + MIR SINE MIR 41 136 -72 267 271 0 0 chr5 192464379 192464438 -10621094 + (CA)n Simple_repeat Simple_repeat 2 60 0 208 261 114 0 chr5 192466199 192466287 -10619245 + MIR SINE MIR 78 175 -87 463 353 52 7 chr5 192466829 192467118 -10618414 + LTR16C LTR ERVL 174 475 -16 349 301 71 85 chr5 192467177 192467701 -10617831 - L2 LINE L2 -92 3221 2704 230 270 148 0 chr5 192467699 192467814 -10617718 + MIR SINE MIR 100 231 -31 * 185 206 221 29 chr5 192467854 192467922 -10617610 + L2 LINE L2 3226 3306 -7 193 295 170 27 chr5 192467987 192468099 -10617433 + MIR SINE MIR 51 178 -84 590 314 46 33 chr5 192469167 192469556 -10615976 + HAL1b LINE L1 59 452 -896 383 270 122 0 chr5 192469558 192469706 -10615826 + HAL1b LINE L1 480 645 -703 2289 236 53 61 chr5 192470000 192470512 -10615020 + L1MC5 LINE L1 6476 6990 -971 2499 57 0 3 chr5 192470512 192470809 -10614723 - AluY SINE Alu -15 296 1 2289 236 53 61 chr5 192470809 192471350 -10614182 + L1MC5 LINE L1 6990 7528 -433 501 227 34 45 chr5 192471443 192471619 -10613913 + L1ME3A LINE L1 5963 6136 -34 2368 101 0 3 chr5 192471711 192472019 -10613513 - AluSx SINE Alu -5 307 1 237 270 40 14 chr5 192472087 192472161 -10613371 + L2 LINE L2 3201 3276 -37 294 289 168 45 chr5 192472398 192472772 -10612760 + L2 LINE L2 2807 3226 -46 401 235 20 92 chr5 192472789 192472827 -10612705 + MER110 LTR ERV1 328 367 -124 207 0 0 0 chr5 192472827 192472850 -10612682 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2615 20 0 0 chr5 192472850 192473146 -10612386 - L1PA2 LINE L1 -11 6144 5849 401 235 20 92 chr5 192473146 192473219 -10612313 + MER110 LTR ERV1 366 429 -62 2200 103 3 34 chr5 192473219 192473540 -10611992 + AluSq SINE Alu 1 311 -2 401 235 20 92 chr5 192473540 192473579 -10611953 + MER110 LTR ERV1 429 469 -22 243 200 0 20 chr5 192473595 192473645 -10611887 + L2 LINE L2 3251 3299 -14 288 0 0 0 chr5 192473936 192473968 -10611564 + (CA)n Simple_repeat Simple_repeat 2 33 0 450 289 36 23 chr5 192475255 192475453 -10610079 + MIR3 SINE MIR 1 199 -52 639 202 67 36 chr5 192475874 192476067 -10609465 - Charlie8 DNA MER1_type -2174 243 45 360 299 21 28 chr5 192476482 192476626 -10608906 - MIR SINE MIR -92 170 28 201 147 0 0 chr5 192476765 192476799 -10608733 + (CCCTA)n Simple_repeat Simple_repeat 2 35 0 421 316 7 0 chr5 192477803 192477939 -10607593 + MIR SINE MIR 92 228 -34 210 287 29 103 chr5 192478015 192478047 -10607485 - MIR SINE MIR -80 182 149 2378 86 7 0 chr5 192478047 192478349 -10607183 - AluSq SINE Alu -9 304 1 210 287 29 103 chr5 192478349 192478452 -10607080 - MIR SINE MIR -113 149 57 1310 232 99 64 chr5 192480126 192480256 -10605276 + MLT1D LTR MaLR 2 126 -379 2247 102 10 0 chr5 192480256 192480549 -10604983 + AluSx SINE Alu 1 296 -16 1310 232 99 64 chr5 192480549 192480626 -10604906 + MLT1D LTR MaLR 126 199 -306 414 0 0 0 chr5 192480626 192480672 -10604860 + (CA)n Simple_repeat Simple_repeat 1 46 0 1310 232 99 64 chr5 192480672 192480950 -10604582 + MLT1D LTR MaLR 199 505 0 773 199 103 103 chr5 192481299 192481580 -10603952 + MER102a DNA MER1_type 44 324 -6 401 206 10 0 chr5 192481969 192482066 -10603466 + GA-rich Low_complexity Low_complexity 3 100 0 354 237 162 52 chr5 192482086 192482259 -10603273 - MIR SINE MIR -32 230 39 649 323 22 0 chr5 192483046 192483278 -10602254 + MIR SINE MIR 20 256 -6 2956 135 128 24 chr5 192483289 192483843 -10601689 + LTR9 LTR ERV1 1 612 0 255 157 0 39 chr5 192483938 192483989 -10601543 + LTR30 LTR ERV1 1 49 -673 1241 76 119 76 chr5 192483989 192484199 -10601333 + LTR12 LTR ERV1 52 270 -444 260 306 10 0 chr5 192484206 192484304 -10601228 + LTR30 LTR ERV1 544 642 -80 631 162 10 0 chr5 192484305 192484404 -10601128 + LTR12 LTR ERV1 482 581 -133 241 263 263 0 chr5 192484813 192484908 -10600624 - L2 LINE L2 -1 3312 3193 282 378 0 31 chr5 192484921 192485048 -10600484 - L2 LINE L2 0 3272 3150 2539 248 133 15 chr5 192485244 192486137 -10599395 + L1MD2 LINE L1 4398 5396 -750 866 118 7 15 chr5 192486138 192486274 -10599258 + AluJo SINE Alu 1 135 -177 4004 205 45 28 chr5 192486296 192486402 -10599130 + L1MD2 LINE L1 5385 5488 -871 2525 67 0 0 chr5 192486402 192486701 -10598831 + AluY SINE Alu 1 299 -12 4004 205 45 28 chr5 192486701 192487336 -10598196 + L1MD2 LINE L1 5488 6148 -211 189 0 0 0 chr5 192487336 192487357 -10598175 + (CA)n Simple_repeat Simple_repeat 2 22 0 4004 205 45 28 chr5 192487357 192487547 -10597985 + L1MD2 LINE L1 6148 6333 -26 904 104 0 56 chr5 192487580 192487724 -10597808 - FLAM_C SINE Alu -3 140 5 382 262 29 0 chr5 192488358 192488461 -10597071 + L2 LINE L2 3188 3293 -20 197 186 35 116 chr5 192488762 192488848 -10596684 - L2 LINE L2 -541 2773 2695 186 302 0 0 chr5 192488855 192488908 -10596624 - L2 LINE L2 0 3272 3220 533 261 7 0 chr5 192489029 192489167 -10596365 - MER103 DNA DNA -20 146 8 2365 87 3 0 chr5 192489187 192489485 -10596047 - AluSg SINE Alu 0 310 12 273 208 87 50 chr5 192489524 192489635 -10595897 - MIR SINE MIR -65 143 17 761 256 90 14 chr5 192489844 192490136 -10595396 - L1ME3 LINE L1 -42 6120 5800 309 26 0 0 chr5 192490339 192490377 -10595155 + (CA)n Simple_repeat Simple_repeat 1 38 0 2198 250 52 57 chr5 192490380 192491028 -10594504 + L1ME2 LINE L1 3026 3676 -2488 2196 95 18 0 chr5 192491028 192491313 -10594219 - AluSx SINE Alu -22 290 1 2198 250 52 57 chr5 192491313 192492135 -10593397 + L1ME2 LINE L1 3676 6155 -9 368 281 7 22 chr5 192492757 192492892 -10592640 - L2 LINE L2 -214 3058 2926 263 254 218 42 chr5 192493419 192493612 -10591920 + MIR SINE MIR 23 249 -13 1133 247 80 41 chr5 192493707 192494007 -10591525 + L1MC4a LINE L1 5521 5764 -357 1681 193 36 17 chr5 192494007 192494364 -10591168 + MLT1A1 LTR MaLR 1 364 -1 1133 247 80 41 chr5 192494364 192494428 -10591104 + L1MC4a LINE L1 5764 5824 -297 2271 114 0 3 chr5 192494428 192494727 -10590805 + AluSx SINE Alu 1 298 -14 240 160 47 9 chr5 192495592 192495698 -10589834 + (TA)n Simple_repeat Simple_repeat 1 110 0 2082 131 0 0 chr5 192495736 192496048 -10589484 + AluSx SINE Alu 1 312 0 195 139 47 0 chr5 192497467 192497510 -10588022 - L2 LINE L2 -1 3312 3268 375 292 80 15 chr5 192498351 192498488 -10587044 - MIR SINE MIR -102 160 15 183 200 36 18 chr5 192499516 192499571 -10585961 + MIR SINE MIR 82 137 -71 1029 310 28 13 chr5 192499740 192500133 -10585399 - MLT1K LTR MaLR -164 424 26 205 326 15 61 chr5 192500359 192500491 -10585041 + MIR SINE MIR 20 145 -63 684 254 35 85 chr5 192500532 192500792 -10584740 - MIR SINE MIR 0 262 16 244 356 22 7 chr5 192501186 192501321 -10584211 - L2 LINE L2 0 3272 3136 946 185 10 63 chr5 192501639 192501839 -10583693 + L1MB5 LINE L1 5930 6139 -35 2160 98 0 4 chr5 192501839 192502116 -10583416 + AluSq SINE Alu 6 281 -32 225 0 0 0 chr5 192502121 192502146 -10583386 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 946 185 10 63 chr5 192502146 192502191 -10583341 + L1MB5 LINE L1 6143 6168 -6 2632 204 132 47 chr5 192502437 192502785 -10582747 + L1ME2 LINE L1 5178 5495 -669 2139 96 0 7 chr5 192502785 192503065 -10582467 + AluSx SINE Alu 35 312 0 2632 204 132 47 chr5 192503065 192503402 -10582130 + L1ME2 LINE L1 5495 5802 -362 2129 136 0 0 chr5 192503402 192503696 -10581836 + AluSx SINE Alu 1 294 -18 2632 204 132 47 chr5 192503696 192503909 -10581623 + L1ME2 LINE L1 5802 6155 -9 1834 172 17 0 chr5 192503934 192504225 -10581307 + AluJo SINE Alu 1 296 -16 473 240 23 0 chr5 192504241 192504370 -10581162 + L1MC4a LINE L1 5605 5736 -428 * 765 259 72 70 chr5 192504361 192504414 -10581118 + L1ME3A LINE L1 2148 2199 -3947 2507 65 3 13 chr5 192504414 192504722 -10580810 - AluY SINE Alu -6 305 1 765 259 72 70 chr5 192504722 192504931 -10580601 + L1ME3A LINE L1 2199 2406 -3740 923 182 0 57 chr5 192504931 192505107 -10580425 + FRAM SINE Alu 1 166 0 765 259 72 70 chr5 192505107 192505315 -10580217 + L1ME3A LINE L1 2406 2620 -3526 2096 273 82 13 chr5 192505381 192506133 -10579399 + L1ME3A LINE L1 4830 5705 -465 2065 84 0 14 chr5 192506133 192506417 -10579115 + L1PA8 LINE L1 5893 6172 0 2096 273 82 13 chr5 192506417 192506913 -10578619 + L1ME3A LINE L1 5705 6165 -5 2181 118 3 0 chr5 192506925 192507214 -10578318 + AluSq SINE Alu 6 295 -18 415 263 66 15 chr5 192507227 192507364 -10578168 - L1ME LINE L1 -501 5620 5477 2360 99 0 10 chr5 192507593 192507907 -10577625 + AluSq SINE Alu 3 313 0 458 107 0 13 chr5 192507909 192507984 -10577548 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 453 292 31 31 chr5 192508028 192508220 -10577312 + MIR3 SINE MIR 17 208 0 310 344 26 15 chr5 192510306 192510501 -10575031 + L1MC4a LINE L1 5763 5959 -1849 2641 124 35 2 chr5 192510719 192511145 -10574387 + L1PA16 LINE L1 5718 6157 -9 25 31 0 0 chr5 192511146 192511178 -10574354 + AT_rich Low_complexity Low_complexity 1 32 0 372 295 184 29 chr5 192511418 192511542 -10573990 + MIR SINE MIR 23 126 -136 2172 134 0 0 chr5 192511542 192511847 -10573685 + AluSx SINE Alu 1 305 -7 372 295 184 29 chr5 192511847 192511929 -10573603 + MIR SINE MIR 126 261 -1 490 329 53 20 chr5 192512875 192513179 -10572353 + L2 LINE L2 2473 2786 -528 2688 223 28 43 chr5 192513198 192513500 -10572032 + MER82 DNA MER2_type 10 315 -338 2198 116 0 3 chr5 192513500 192513793 -10571739 - AluSg SINE Alu -18 292 1 2688 223 28 43 chr5 192513793 192514144 -10571388 + MER82 DNA MER2_type 315 653 0 364 306 67 31 chr5 192515068 192515261 -10570271 - MIR SINE MIR -34 228 29 514 266 57 74 chr5 192515510 192515578 -10569954 - MIR SINE MIR -21 241 173 471 222 91 0 chr5 192515578 192515677 -10569855 - MER81 DNA DNA -3 111 4 514 266 57 74 chr5 192515677 192515837 -10569695 - MIR SINE MIR -89 173 17 545 275 97 29 chr5 192517019 192517226 -10568306 - MIR SINE MIR -10 252 32 243 324 65 47 chr5 192517556 192517726 -10567806 - MLT1L LTR MaLR -25 590 418 1965 143 82 74 chr5 192518758 192519220 -10566312 + MER31B LTR ERV1 1 466 0 708 261 108 38 chr5 192519220 192519534 -10565998 + LTR16A LTR ERVL 120 457 0 2145 288 59 13 chr5 192519542 192520375 -10565157 + HERV16 LTR ERVL 23 893 -4103 324 324 82 10 chr5 192520422 192520629 -10564903 + HERV16 LTR ERVL 967 1188 -3808 293 344 78 17 chr5 192520738 192520968 -10564564 + HERV16 LTR ERVL 1313 1556 -3440 395 321 32 0 chr5 192521085 192521276 -10564256 + HERV16 LTR ERVL 1753 1869 -3127 2013 290 64 37 chr5 192521302 192522067 -10563465 + HERV16 LTR ERVL 2045 2830 -2166 1193 129 0 18 chr5 192522067 192522237 -10563295 + FRAM SINE Alu 1 159 -17 1311 335 33 28 chr5 192522237 192522926 -10562606 + HERV16 LTR ERVL 2837 3529 -1956 253 368 22 15 chr5 192523169 192523305 -10562227 + MIR SINE MIR 13 149 -113 21 0 0 0 chr5 192524003 192524024 -10561508 + AT_rich Low_complexity Low_complexity 1 21 0 227 284 211 9 chr5 192524068 192524177 -10561355 + MIR3 SINE MIR 28 158 -50 247 281 79 11 chr5 192524238 192524327 -10561205 - L3 LINE CR1 -1 1576 1482 232 283 80 29 chr5 192524781 192524919 -10560613 - MLT1J LTR MaLR -125 386 242 191 269 19 0 chr5 192525823 192525875 -10559657 + MIR SINE MIR 90 142 -66 256 82 20 20 chr5 192526735 192526784 -10558748 + (GA)n Simple_repeat Simple_repeat 2 50 0 484 252 101 0 chr5 192527884 192528003 -10557529 + L2 LINE L2 3141 3271 -1 428 213 30 153 chr5 192528611 192528879 -10556653 + L1ME LINE L1 5589 5823 -298 771 231 168 29 chr5 192529340 192529516 -10556016 + L1MD3 LINE L1 6443 6593 -1402 471 113 0 0 chr5 192529516 192529587 -10555945 + (TG)n Simple_repeat Simple_repeat 2 72 0 771 231 168 29 chr5 192529587 192529726 -10555806 + L1MD3 LINE L1 6593 6802 -1193 1340 234 35 66 chr5 192529765 192529926 -10555606 + LTR40c LTR ERVL 39 203 -262 2285 96 0 3 chr5 192529926 192530219 -10555313 + AluY SINE Alu 1 292 -19 1340 234 35 66 chr5 192530219 192530230 -10555302 + LTR40c LTR ERVL 203 213 -252 2078 152 7 0 chr5 192530230 192530533 -10554999 + AluJb SINE Alu 1 305 -7 1340 234 35 66 chr5 192530533 192530786 -10554746 + LTR40c LTR ERVL 213 452 -13 799 238 65 5 chr5 192530806 192531020 -10554512 + L1MC4 LINE L1 6834 7060 -982 463 342 90 15 chr5 192531187 192531453 -10554079 + MLT1K LTR MaLR 89 374 -214 498 294 89 6 chr5 192531495 192531675 -10553857 + LTR67 LTR ERVL 1 195 -362 347 312 30 45 chr5 192531880 192532082 -10553450 + LTR67 LTR ERVL 356 554 -3 345 312 12 25 chr5 192533200 192533363 -10552169 + MLT1J LTR MaLR 18 217 -286 816 249 80 97 chr5 192533606 192533703 -10551829 - L1MC4a LINE L1 -644 5517 5420 2287 137 19 22 chr5 192533703 192534068 -10551464 + THE1B LTR MaLR 1 364 0 816 249 80 97 chr5 192534068 192534147 -10551385 - L1MC4a LINE L1 -741 5420 5791 3399 104 14 0 chr5 192534147 192534635 -10550897 - L1PA16 LINE L1 -10 6156 5662 816 249 80 97 chr5 192534635 192535036 -10550496 - L1MC4a LINE L1 -369 5792 5386 295 344 0 0 chr5 192535188 192535281 -10550251 + MIR SINE MIR 166 258 -4 1955 225 78 34 chr5 192535348 192535916 -10549616 + MLT1E LTR MaLR 1 593 0 275 281 55 39 chr5 192536144 192536272 -10549260 + MIR3 SINE MIR 3 132 -76 329 62 21 0 chr5 192536993 192537041 -10548491 + (GAAA)n Simple_repeat Simple_repeat 2 50 0 2150 116 0 26 chr5 192537572 192537883 -10547649 + AluJb SINE Alu 4 306 -6 357 141 8 4 chr5 192538063 192538195 -10547337 + MER53 DNA DNA 13 189 0 750 157 164 0 chr5 192539154 192539294 -10546238 + FRAM SINE Alu 11 173 -3 451 286 71 25 chr5 192539297 192539493 -10546039 + MIR SINE MIR 18 222 -40 274 207 207 0 chr5 192539712 192539794 -10545738 - L2 LINE L2 -19 3294 3196 * 723 243 68 6 chr5 192539787 192539964 -10545568 - MIR SINE MIR -56 206 19 357 214 90 79 chr5 192539977 192540155 -10545377 - MIR SINE MIR -71 191 12 225 119 0 0 chr5 192540667 192540709 -10544823 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 1926 138 3 3 chr5 192540709 192540993 -10544539 - AluJb SINE Alu -28 284 1 1401 240 60 71 chr5 192541313 192541538 -10543994 - MLT1K LTR MaLR 0 588 362 2275 130 25 33 chr5 192541538 192541696 -10543836 + MLT1B LTR MaLR 1 159 -231 2159 113 7 10 chr5 192541696 192542006 -10543526 + AluSg SINE Alu 1 309 -1 2275 130 25 33 chr5 192542006 192542240 -10543292 + MLT1B LTR MaLR 159 390 0 1401 240 60 71 chr5 192542240 192542552 -10542980 - MLT1K LTR MaLR -226 362 57 2128 135 3 0 chr5 192542670 192542981 -10542551 - AluSx SINE Alu 0 312 1 717 221 236 0 chr5 192543266 192543474 -10542058 + MIR SINE MIR 6 262 0 182 328 62 16 chr5 192543498 192543562 -10541970 + L2 LINE L2 3111 3177 -95 1921 169 22 14 chr5 192543564 192543924 -10541608 - MLT1A1 LTR MaLR -2 363 1 196 273 136 0 chr5 192543978 192544044 -10541488 + L2 LINE L2 3239 3313 0 180 289 134 10 chr5 192544993 192545090 -10540442 - L2 LINE L2 0 3272 3164 2097 106 3 20 chr5 192545714 192546007 -10539525 + AluSc SINE Alu 1 288 -21 1704 195 0 7 chr5 192546424 192546726 -10538806 - AluJo SINE Alu -2 310 11 1809 109 0 0 chr5 192546909 192547148 -10538384 - AluSx SINE Alu -32 280 42 24 0 0 0 chr5 192547234 192547258 -10538274 + AT_rich Low_complexity Low_complexity 1 24 0 334 296 49 27 chr5 192547303 192547423 -10538109 - MIR SINE MIR -63 145 28 370 291 52 22 chr5 192548285 192548419 -10537113 + MIR3 SINE MIR 11 148 -60 200 143 18 125 chr5 192549393 192549449 -10536083 - L2 LINE L2 -10 3303 3254 583 349 40 8 chr5 192549681 192549930 -10535602 - MIR SINE MIR -3 259 3 237 159 0 0 chr5 192550034 192550078 -10535454 + (CAT)n Simple_repeat Simple_repeat 3 46 0 351 250 0 0 chr5 192550145 192550217 -10535315 + MIR SINE MIR 75 146 -62 913 238 10 82 chr5 192550999 192551293 -10534239 - Charlie8 DNA MER1_type -2141 276 4 714 274 0 6 chr5 192551329 192551493 -10534039 + MIR SINE MIR 44 206 -56 358 322 92 11 chr5 192551893 192552067 -10533465 + MIR SINE MIR 63 250 -12 1176 296 18 15 chr5 192552126 192552639 -10532893 + MLT1K LTR MaLR 20 576 -12 226 247 0 39 chr5 192552572 192552649 -10532883 + LTR67 LTR ERVL 484 557 0 * 1205 139 22 49 chr5 192552834 192553057 -10532475 + MER20 DNA MER1_type 1 217 -2 433 316 7 0 chr5 192553537 192553692 -10531840 - MER103 DNA DNA -2 164 9 192 298 0 0 chr5 192553946 192554003 -10531529 - L2 LINE L2 -9 3263 3207 867 140 7 7 chr5 192554021 192554157 -10531375 + AluJo SINE Alu 1 136 -176 1234 142 33 5 chr5 192555486 192555697 -10529835 + L1PA16 LINE L1 5941 6157 -9 2393 102 3 0 chr5 192556047 192556351 -10529181 + AluSq SINE Alu 1 305 -8 216 267 0 0 chr5 192557104 192557149 -10528383 - L2 LINE L2 -235 3037 2993 758 282 62 80 chr5 192557198 192557761 -10527771 + MLT1K LTR MaLR 23 575 -13 273 264 41 58 chr5 192557924 192558045 -10527487 - MIR3 SINE MIR -15 193 75 323 288 36 41 chr5 192558159 192558315 -10527217 + MIR SINE MIR 1 147 -61 401 208 148 10 chr5 192558476 192558577 -10526955 + L2 LINE L2 3195 3309 -4 * 500 290 190 11 chr5 192558570 192558974 -10526558 - L2 LINE L2 -133 3180 2706 208 194 0 0 chr5 192559026 192559057 -10526475 + L2 LINE L2 3219 3249 -23 492 133 0 0 chr5 192559592 192559675 -10525857 + (TC)n Simple_repeat Simple_repeat 2 84 0 181 325 118 74 chr5 192560391 192560714 -10524818 + L2 LINE L2 2919 3255 -17 277 335 102 19 chr5 192561858 192562064 -10523468 - MIR SINE MIR -34 228 6 930 149 27 0 chr5 192562124 192562272 -10523260 + AluJo SINE Alu 138 289 -23 570 268 43 77 chr5 192566415 192566625 -10518907 - MIR SINE MIR -44 218 23 232 165 93 134 chr5 192566954 192567051 -10518481 + MER112 DNA MER1_type 65 157 -103 319 248 113 35 chr5 192567353 192567422 -10518110 + L1ME LINE L1 5511 5573 -548 326 75 57 0 chr5 192567422 192567475 -10518057 + L1PA6 LINE L1 6099 6154 0 319 248 113 35 chr5 192567475 192567546 -10517986 + L1ME LINE L1 5573 5662 -459 2036 152 0 0 chr5 192568162 192568465 -10517067 + AluSx SINE Alu 1 303 -9 348 257 97 14 chr5 192569167 192569311 -10516221 - MER117 DNA MER1_type -41 156 1 1448 181 33 0 chr5 192569357 192569628 -10515904 - MER58B DNA MER1_type 0 341 62 21 36 0 0 chr5 192569952 192569980 -10515552 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 192570404 192570428 -10515104 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 192571540 192571568 -10513964 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr5 192572568 192572593 -10512939 + (CA)n Simple_repeat Simple_repeat 2 26 0 286 244 37 24 chr5 192572724 192572806 -10512726 + MIR SINE MIR 81 163 -99 186 278 188 35 chr5 192575337 192575481 -10510051 + L3b LINE CR1 1374 1539 -44 1864 171 17 0 chr5 192575544 192575837 -10509695 + AluJb SINE Alu 1 298 -14 1546 181 51 0 chr5 192576068 192576568 -10508964 + L1MB7 LINE L1 4921 5519 -655 558 192 0 33 chr5 192576769 192576896 -10508636 + L1MB7 LINE L1 5487 5604 -537 891 135 16 143 chr5 192576896 192577140 -10508392 + AluJo SINE Alu 84 296 -16 1977 202 68 41 chr5 192577160 192577314 -10508218 + L1MB7 LINE L1 5649 5797 -387 813 136 53 45 chr5 192577314 192577446 -10508086 + FLAM_C SINE Alu 1 133 0 1977 202 68 41 chr5 192577446 192577805 -10507727 + L1MB7 LINE L1 5797 6176 -8 351 342 63 19 chr5 192577885 192578043 -10507489 + L2 LINE L2 3107 3271 -1 302 243 164 14 chr5 192578045 192578185 -10507347 + MIR SINE MIR 58 218 -44 2509 128 47 26 chr5 192578795 192579218 -10506314 + MSTB1 LTR MaLR 1 432 0 1479 186 25 11 chr5 192580611 192580733 -10504799 + AluJo SINE Alu 1 120 -192 468 100 0 0 chr5 192580733 192580813 -10504719 + (TG)n Simple_repeat Simple_repeat 2 81 0 1479 186 25 11 chr5 192580813 192580964 -10504568 + AluJo SINE Alu 120 278 -34 234 239 60 15 chr5 192581010 192581077 -10504455 + L1ME LINE L1 5549 5618 -503 5117 234 78 44 chr5 192581328 192582888 -10502644 - L1MC1 LINE L1 -369 6244 4738 2266 83 3 3 chr5 192582888 192583176 -10502356 - AluSx SINE Alu -24 288 1 5117 234 78 44 chr5 192583176 192584498 -10501034 - L1MC1 LINE L1 -1875 4738 3209 1735 168 0 14 chr5 192584498 192584784 -10500748 - AluJo SINE Alu -30 282 1 5117 234 78 44 chr5 192584784 192584924 -10500608 - L1MC1 LINE L1 -3404 3209 3075 3781 132 14 7 chr5 192584974 192585544 -10499988 - L1PB1 LINE L1 0 6151 5578 1352 44 0 0 chr5 192585560 192585720 -10499812 + L1PA4 LINE L1 5996 6155 0 4565 159 13 75 chr5 192585724 192587104 -10498428 - L1PB1 LINE L1 -559 5592 4306 3778 162 93 4 chr5 192587105 192587796 -10497736 - L1MC1 LINE L1 -5641 785 34 3821 31 47 33 chr5 192588282 192588808 -10496724 + L1PA4 LINE L1 5658 6155 0 2098 121 0 22 chr5 192588911 192589225 -10496307 + AluSx SINE Alu 1 307 -5 495 247 62 0 chr5 192589228 192589374 -10496158 + MER103 DNA DNA 1 155 -11 205 186 0 0 chr5 192589559 192589602 -10495930 + A-rich Low_complexity Low_complexity 1 43 0 2172 103 43 3 chr5 192589837 192590138 -10495394 - AluSq SINE Alu 0 313 1 864 258 122 78 chr5 192590617 192591343 -10494189 + L1MDb LINE L1 775 1511 -4895 * 2283 192 20 54 chr5 192591335 192591434 -10494098 + L1MC4 LINE L1 5077 5178 -1338 2299 105 0 0 chr5 192591434 192591728 -10493804 + AluSx SINE Alu 10 303 -9 2283 192 20 54 chr5 192591728 192591784 -10493748 + L1MC4 LINE L1 5178 5234 -1282 2039 130 0 34 chr5 192591784 192592106 -10493426 + AluSp SINE Alu 1 311 -2 2283 192 20 54 chr5 192592106 192592425 -10493107 + L1MC4 LINE L1 5234 5519 -997 1419 112 197 42 chr5 192592425 192592684 -10492848 + AluSx SINE Alu 1 299 -3 2283 192 20 54 chr5 192592684 192592931 -10492601 + L1MC4 LINE L1 5519 5773 -743 227 264 36 29 chr5 192592969 192593104 -10492428 + L1MC4 LINE L1 6018 6188 -1633 311 295 89 0 chr5 192594323 192594435 -10491097 - L2 LINE L2 -2 3270 3149 226 345 124 9 chr5 192594540 192594653 -10490879 - MIR SINE MIR -67 141 16 252 193 111 133 chr5 192595169 192595304 -10490228 - MIR SINE MIR -13 249 118 234 0 0 0 chr5 192595601 192595627 -10489905 + (A)n Simple_repeat Simple_repeat 1 26 0 206 320 50 20 chr5 192596977 192597077 -10488455 + MIR SINE MIR 133 235 -27 180 111 0 0 chr5 192597989 192598016 -10487516 + (CAA)n Simple_repeat Simple_repeat 2 28 0 258 304 152 46 chr5 192598784 192599001 -10486531 + MIR SINE MIR 23 262 0 342 309 65 48 chr5 192599204 192599423 -10486109 + MIR SINE MIR 23 241 -21 210 328 179 25 chr5 192602532 192602733 -10482799 - MIR SINE MIR -30 232 1 197 279 177 13 chr5 192602988 192603067 -10482465 - L3 LINE CR1 -30 1547 1456 224 283 24 89 chr5 192603199 192603381 -10482151 + MIR SINE MIR 22 189 -73 253 229 138 28 chr5 192603503 192603612 -10481920 + MIR SINE MIR 92 212 -50 737 335 68 67 chr5 192603700 192604475 -10481057 - L3 LINE CR1 -486 1091 316 260 237 102 25 chr5 192604541 192604659 -10480873 - L1ME4a LINE L1 -21 6100 5974 215 298 0 0 chr5 192604828 192604875 -10480657 + MER91 DNA MER1_type 1 47 -143 1788 161 4 7 chr5 192605297 192605577 -10479955 - AluJo SINE Alu -33 279 1 1218 164 0 35 chr5 192605846 192606047 -10479485 - AluJb SINE Alu -33 279 86 1746 165 13 23 chr5 192606200 192606503 -10479029 + AluSx SINE Alu 7 306 -6 256 216 23 18 chr5 192606669 192606740 -10478792 + MER5A DNA MER1_type 50 136 -53 2302 105 0 0 chr5 192606744 192607049 -10478483 - AluSc SINE Alu -4 305 1 410 316 60 23 chr5 192607345 192607478 -10478054 + MIR SINE MIR 17 129 -79 323 267 11 0 chr5 192607476 192607566 -10477966 - MIR SINE MIR -49 213 123 * 513 218 189 23 chr5 192608778 192608986 -10476546 - MIR SINE MIR -20 242 5 334 285 42 49 chr5 192610589 192610733 -10474799 + MIR3 SINE MIR 60 202 -6 656 197 0 16 chr5 192611351 192611478 -10474054 + FLAM_A SINE Alu 6 130 -12 25 0 0 0 chr5 192611496 192611521 -10474011 + AT_rich Low_complexity Low_complexity 1 25 0 1406 168 81 22 chr5 192611524 192611845 -10473687 + L1MC1 LINE L1 5994 6333 0 201 195 0 0 chr5 192611865 192611906 -10473626 + (TG)n Simple_repeat Simple_repeat 2 42 0 2271 118 0 3 chr5 192612241 192612546 -10472986 - AluSq SINE Alu -9 304 1 918 189 16 11 chr5 192613432 192613617 -10471915 - MER5A DNA MER1_type -1 188 3 440 279 123 59 chr5 192614655 192614804 -10470728 + L1ME4a LINE L1 5682 5820 -301 2115 111 7 10 chr5 192614804 192615101 -10470431 + AluSx SINE Alu 1 296 -16 440 279 123 59 chr5 192615101 192615324 -10470208 + L1ME4a LINE L1 5820 6078 -43 591 15 0 0 chr5 192615987 192616055 -10469477 + (CA)n Simple_repeat Simple_repeat 1 68 0 342 0 0 0 chr5 192617793 192617831 -10467701 + (TG)n Simple_repeat Simple_repeat 1 38 0 3642 46 2 7 chr5 192617974 192618430 -10467102 + L1PA5 LINE L1 5698 6151 -3 2276 115 0 0 chr5 192619094 192619398 -10466134 - AluSc SINE Alu -5 304 1 297 0 0 0 chr5 192619946 192619979 -10465553 + (TG)n Simple_repeat Simple_repeat 2 34 0 451 151 58 0 chr5 192620366 192620452 -10465080 + Tigger4(Zombi) DNA MER2_type 146 2731 0 773 202 48 39 chr5 192620888 192621096 -10464436 - MER20 DNA MER1_type -9 210 1 191 284 68 54 chr5 192621428 192621502 -10464030 + MER5B DNA MER1_type 104 189 0 405 320 122 5 chr5 192621744 192621941 -10463591 - MIR SINE MIR -3 259 40 2332 107 0 22 chr5 192622053 192622372 -10463160 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 192622591 192622614 -10462918 + AT_rich Low_complexity Low_complexity 1 23 0 1148 208 110 8 chr5 192622622 192622886 -10462646 + AluJo SINE Alu 1 291 -11 272 304 0 43 chr5 192623552 192623644 -10461888 - MIR SINE MIR -155 107 20 1639 202 7 7 chr5 192623929 192624211 -10461321 - AluJo SINE Alu -25 287 6 252 0 0 0 chr5 192624254 192624282 -10461250 + (GGGA)n Simple_repeat Simple_repeat 4 31 0 309 51 0 0 chr5 192625076 192625115 -10460417 + (TG)n Simple_repeat Simple_repeat 1 39 0 1933 130 7 0 chr5 192625115 192625392 -10460140 - AluSx SINE Alu -33 279 1 705 252 84 9 chr5 192625399 192625732 -10459800 - L1M4 LINE L1 -809 5337 4980 285 230 70 10 chr5 192625769 192625869 -10459663 - MER112 DNA MER1_type -1 259 154 398 147 33 35 chr5 192625886 192625996 -10459536 + HsTC2 DNA Tc2 4 1830 -68 983 225 77 139 chr5 192626024 192626093 -10459439 + LTR28 LTR ERV1 1 73 -1682 2434 84 7 0 chr5 192626093 192626401 -10459131 - AluSg SINE Alu 0 310 1 983 225 77 139 chr5 192626401 192627228 -10458304 + LTR28 LTR ERV1 73 1507 -248 210 37 0 0 chr5 192627591 192627618 -10457914 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1298 184 0 26 chr5 192627646 192627880 -10457652 - AluJo SINE Alu 0 312 85 395 249 112 24 chr5 192627884 192628089 -10457443 - MER113 DNA MER1_type? -297 224 2 270 319 21 0 chr5 192628440 192628534 -10456998 + MIR SINE MIR 102 197 -65 2214 131 106 8 chr5 192628555 192628943 -10456589 + MSTA LTR MaLR 1 426 -2 353 271 23 68 chr5 192628947 192629080 -10456452 + L2 LINE L2 3183 3309 -4 472 242 89 57 chr5 192629095 192629409 -10456123 + L1M4 LINE L1 4877 5200 -946 226 214 0 14 chr5 192629617 192629687 -10455845 + L1M LINE L1 5302 5370 -974 494 204 88 0 chr5 192630110 192630223 -10455309 + L2 LINE L2 1905 2027 -1287 1011 235 33 25 chr5 192630396 192630758 -10454774 + L1 LINE L1 4453 4817 -1329 333 164 212 13 chr5 192630779 192630945 -10454587 + L1M4 LINE L1 3917 4110 -2036 2187 121 3 0 chr5 192630970 192631267 -10454265 + AluSx SINE Alu 1 298 -14 1912 122 21 10 chr5 192631269 192631557 -10453975 + AluSx SINE Alu 1 291 -21 2393 76 0 10 chr5 192631749 192632063 -10453469 + AluY SINE Alu 1 311 0 3717 201 50 104 chr5 192632437 192632710 -10452822 + L1MC1 LINE L1 3972 4258 -2075 1905 24 0 0 chr5 192632710 192632919 -10452613 + SVA Other Other 1177 1385 -1 3717 201 50 104 chr5 192632919 192633978 -10451554 + L1MC1 LINE L1 4258 5373 -960 686 72 10 0 chr5 192633978 192634075 -10451457 + (TC)n Simple_repeat Simple_repeat 1 98 0 1813 169 0 0 chr5 192634075 192634354 -10451178 - AluJb SINE Alu -33 279 1 3717 201 50 104 chr5 192634354 192635017 -10450515 + L1MC1 LINE L1 5372 5778 -555 1664 170 9 44 chr5 192635017 192635334 -10450198 + AluJo SINE Alu 1 306 -6 3717 201 50 104 chr5 192635334 192635789 -10449743 + L1MC1 LINE L1 5778 6256 -77 544 245 40 35 chr5 192636142 192636342 -10449190 - MER105 DNA DNA -2 202 2 662 303 55 83 chr5 192636445 192636575 -10448957 + HAL1b LINE L1 -6 126 -1205 1934 150 7 3 chr5 192636575 192636881 -10448651 + AluSx SINE Alu 1 307 -5 662 303 55 83 chr5 192636881 192637065 -10448467 + HAL1b LINE L1 126 146 -1185 905 160 14 61 chr5 192637065 192637126 -10448406 + L1MB8 LINE L1 5971 6033 -145 2346 68 16 13 chr5 192637126 192637436 -10448096 - AluY SINE Alu 0 311 1 905 160 14 61 chr5 192637436 192637587 -10447945 + L1MB8 LINE L1 6033 6173 -5 662 303 55 83 chr5 192637587 192637910 -10447622 + HAL1b LINE L1 146 477 -854 2336 115 0 0 chr5 192638008 192638320 -10447212 + AluSx SINE Alu 1 312 0 1789 157 7 26 chr5 192638390 192638695 -10446837 + AluJo SINE Alu 1 299 -13 1010 178 17 0 chr5 192639553 192639733 -10445799 - MER58A DNA MER1_type -3 221 39 2007 141 29 10 chr5 192639733 192640039 -10445493 + AluJb SINE Alu 1 312 0 2253 225 44 32 chr5 192640155 192640244 -10445288 + L1MC4 LINE L1 5254 5340 -2468 1671 161 10 20 chr5 192640244 192640542 -10444990 - AluJo SINE Alu -17 295 1 2253 225 44 32 chr5 192640542 192641133 -10444399 + L1MC4 LINE L1 5340 5942 -1866 2113 125 6 10 chr5 192641133 192641444 -10444088 + AluSg SINE Alu 1 310 0 2016 139 7 3 chr5 192641597 192641906 -10443626 + AluJo SINE Alu 3 312 0 951 177 84 78 chr5 192641980 192642302 -10443230 + MER2 DNA MER2_type 3 326 -19 2098 219 91 37 chr5 192642305 192642787 -10442745 + L1MC4 LINE L1 6421 6946 -1096 2259 90 7 0 chr5 192642787 192643076 -10442456 + AluSg SINE Alu 1 291 -19 2098 219 91 37 chr5 192643076 192643219 -10442313 + L1MC4 LINE L1 6946 7080 -962 1806 254 77 8 chr5 192643223 192643844 -10441688 + L1MC4 LINE L1 7238 7901 -141 225 236 0 0 chr5 192644210 192644265 -10441267 - L1MC4 LINE L1 -2 8040 7986 1153 267 97 5 chr5 192644267 192644701 -10440831 - L1MC4 LINE L1 -141 7901 7428 1704 159 4 11 chr5 192644716 192644986 -10440546 + AluJb SINE Alu 20 287 -25 58 15 0 0 chr5 192644986 192645051 -10440481 + AT_rich Low_complexity Low_complexity 1 65 0 2131 103 27 0 chr5 192645636 192645928 -10439604 - AluSc SINE Alu -9 300 1 26 0 0 0 chr5 192646405 192646431 -10439101 + AT_rich Low_complexity Low_complexity 1 26 0 2346 61 10 13 chr5 192646474 192646786 -10438746 + AluY SINE Alu 1 311 0 879 239 50 64 chr5 192647121 192647418 -10438114 - L2 LINE L2 0 3313 3021 490 284 60 37 chr5 192647561 192647779 -10437753 + MIR SINE MIR 34 256 -6 1884 166 49 29 chr5 192648085 192648470 -10437062 + MLT2C1 LTR ERVL 1 393 -4 1317 245 85 30 chr5 192648491 192648985 -10436547 + L2 LINE L2 2633 3180 -133 2424 91 3 0 chr5 192648985 192649293 -10436239 - AluSx SINE Alu -3 309 1 1317 245 85 30 chr5 192649293 192649434 -10436098 + L2 LINE L2 3180 3312 -1 302 171 66 13 chr5 192649452 192649528 -10436004 + L1ME4a LINE L1 6033 6112 -9 711 167 0 58 chr5 192649596 192649734 -10435798 + FLAM_C SINE Alu 1 130 -3 307 192 103 0 chr5 192649816 192649894 -10435638 + L1ME LINE L1 5735 5820 -301 1213 198 0 5 chr5 192649896 192650108 -10435424 + AluJb SINE Alu 84 294 -18 21 0 0 0 chr5 192650109 192650130 -10435402 + AT_rich Low_complexity Low_complexity 1 21 0 2367 86 0 3 chr5 192650133 192650434 -10435098 + AluSg SINE Alu 1 300 -10 838 145 0 0 chr5 192650636 192650753 -10434779 + FLAM_C SINE Alu 2 118 -15 403 318 74 42 chr5 192651709 192652106 -10433426 + L1ME LINE L1 5176 5583 -538 232 312 47 18 chr5 192652128 192652298 -10433234 + L1ME LINE L1 5650 5824 -297 284 208 0 26 chr5 192652503 192652580 -10432952 + L1ME3A LINE L1 6082 6156 -14 2040 131 0 3 chr5 192652783 192653073 -10432459 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr5 192653076 192653106 -10432426 + AT_rich Low_complexity Low_complexity 1 30 0 1873 171 0 7 chr5 192653434 192653739 -10431793 + AluJb SINE Alu 3 305 -7 1174 110 123 0 chr5 192653787 192653950 -10431582 - AluSx SINE Alu -129 183 1 346 202 11 11 chr5 192654545 192654627 -10430905 + (TA)n Simple_repeat Simple_repeat 2 86 -9 2367 86 10 0 chr5 192654627 192654929 -10430603 - AluSx SINE Alu -7 305 1 346 202 11 11 chr5 192654929 192654940 -10430592 + (TA)n Simple_repeat Simple_repeat 85 95 0 1397 48 76 33 chr5 192654951 192655161 -10430371 - MER30 DNA MER1_type -11 219 1 1570 153 3 89 chr5 192655161 192655475 -10430057 - AluJo SINE Alu -25 287 1 436 327 7 33 chr5 192655853 192656006 -10429526 - MIR3 SINE MIR -57 151 3 351 297 9 9 chr5 192656412 192656523 -10429009 + MIR SINE MIR 2 112 -150 235 191 0 0 chr5 192656812 192656854 -10428678 + L2 LINE L2 3226 3267 -5 320 222 144 11 chr5 192657180 192657270 -10428262 + MIR SINE MIR 119 220 -42 374 302 36 14 chr5 192660325 192660464 -10425068 - MIR SINE MIR -115 147 6 437 259 138 0 chr5 192661053 192661169 -10424363 - MER94 DNA DNA 0 134 3 213 265 29 29 chr5 192661181 192661249 -10424283 + MIR SINE MIR 16 83 -125 317 221 274 9 chr5 192661528 192661641 -10423891 - MIR SINE MIR -12 250 108 22 0 0 0 chr5 192661682 192661704 -10423828 + AT_rich Low_complexity Low_complexity 1 22 0 2098 135 6 6 chr5 192661741 192662052 -10423480 + AluSx SINE Alu 1 311 -1 1858 171 3 0 chr5 192662269 192662568 -10422964 + AluJb SINE Alu 1 300 -12 231 252 0 117 chr5 192662784 192662887 -10422645 - MIR3 SINE MIR -1 207 117 366 278 45 57 chr5 192663173 192663359 -10422173 - MIR SINE MIR -21 241 55 2282 104 0 0 chr5 192663825 192664122 -10421410 - AluSx SINE Alu -15 297 1 294 143 0 0 chr5 192665356 192665405 -10420127 + (CA)n Simple_repeat Simple_repeat 2 50 0 234 360 53 0 chr5 192665428 192665542 -10419990 - L2 LINE L2 -235 3037 2918 1995 134 7 10 chr5 192667421 192667726 -10417806 + AluSx SINE Alu 3 306 -6 1969 154 149 16 chr5 192667976 192668352 -10417180 + MSTA LTR MaLR 3 428 0 258 267 181 9 chr5 192669093 192669209 -10416323 - MIR SINE MIR -122 140 5 431 258 87 49 chr5 192669311 192669598 -10415934 + L1ME4a LINE L1 5550 5847 -274 21 0 0 0 chr5 192669708 192669729 -10415803 + AT_rich Low_complexity Low_complexity 1 21 0 2359 85 3 0 chr5 192669733 192670028 -10415504 + AluSp SINE Alu 1 296 -17 261 0 0 0 chr5 192670031 192670060 -10415472 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 333 0 0 0 chr5 192670059 192670096 -10415436 + (CA)n Simple_repeat Simple_repeat 2 38 0 2358 63 3 7 chr5 192670351 192670650 -10414882 + AluY SINE Alu 2 299 -12 2029 126 0 0 chr5 192671163 192671441 -10414091 + AluSg SINE Alu 1 278 -32 2065 132 0 10 chr5 192671876 192672180 -10413352 - AluSx SINE Alu -11 301 1 1837 131 105 37 chr5 192672327 192672678 -10412854 + THE1C LTR MaLR 1 375 0 191 244 0 0 chr5 192673232 192673273 -10412259 - MIR3 SINE MIR -17 191 151 1584 187 0 4 chr5 192673876 192674138 -10411394 + AluJb SINE Alu 1 261 -51 1528 163 12 4 chr5 192674139 192674384 -10411148 + AluJb SINE Alu 15 261 -51 1876 131 50 0 chr5 192674385 192674492 -10411040 + AluJo SINE Alu 15 115 -197 342 0 0 0 chr5 192674492 192674530 -10411002 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1876 131 50 0 chr5 192674530 192674704 -10410828 + AluJo SINE Alu 115 310 -2 2422 82 0 0 chr5 192674726 192675020 -10410512 - AluSx SINE Alu -18 294 1 701 200 58 58 chr5 192675314 192675589 -10409943 + L1MC5 LINE L1 7298 7572 -389 1939 153 12 56 chr5 192675605 192676018 -10409514 + L1MC3 LINE L1 7370 7764 -21 22 0 0 0 chr5 192676024 192676046 -10409486 + AT_rich Low_complexity Low_complexity 1 22 0 233 120 360 0 chr5 192676220 192676270 -10409262 - MER113 DNA MER1_type? 0 521 454 2258 112 3 0 chr5 192676328 192676632 -10408900 + AluSp SINE Alu 1 305 -8 985 211 19 0 chr5 192676751 192676912 -10408620 + FAM SINE Alu 1 164 -11 2080 107 18 0 chr5 192676987 192677268 -10408264 - AluSq SINE Alu -26 287 2 336 296 134 23 chr5 192677754 192677926 -10407606 + MIR SINE MIR 66 256 -6 198 236 0 0 chr5 192678219 192678274 -10407258 + GA-rich Low_complexity Low_complexity 4 58 0 250 234 23 156 chr5 192678591 192678633 -10406899 - L2 LINE L2 -18 3254 3208 1609 152 91 120 chr5 192678633 192678940 -10406592 + MSTD LTR MaLR 1 315 -81 1828 153 42 0 chr5 192678940 192679228 -10406304 + AluSq SINE Alu 1 300 -13 1228 178 128 29 chr5 192679233 192679514 -10406018 + AluSg SINE Alu 1 309 -1 1609 152 91 120 chr5 192679514 192679608 -10405924 + MSTD LTR MaLR 319 396 0 250 234 23 156 chr5 192679608 192679693 -10405839 - L2 LINE L2 -64 3208 3144 2338 103 50 36 chr5 192679728 192680087 -10405445 - THE1B LTR MaLR 0 364 1 272 313 130 23 chr5 192680142 192680273 -10405259 - L2 LINE L2 -164 3108 2964 884 154 52 120 chr5 192681261 192681494 -10404038 + AluJb SINE Alu 76 292 -20 182 37 37 0 chr5 192681494 192681521 -10404011 + (CATA)n Simple_repeat Simple_repeat 3 30 0 230 260 41 0 chr5 192681521 192681594 -10403938 + L1ME4a LINE L1 5935 6010 -111 207 244 35 23 chr5 192681601 192681687 -10403845 + T-rich Low_complexity Low_complexity 5 91 0 1025 241 114 20 chr5 192681768 192681872 -10403660 + L1ME2 LINE L1 4910 5003 -1161 5207 51 0 0 chr5 192681872 192682463 -10403069 - LTR10C LTR ERV1 0 591 1 1025 241 114 20 chr5 192682463 192682968 -10402564 + L1ME2 LINE L1 5003 5612 -552 2053 216 57 120 chr5 192682968 192683774 -10401758 + MER21B LTR ERV1 1 755 -108 1865 200 109 34 chr5 192683842 192684366 -10401166 + L1ME2 LINE L1 5606 6334 0 283 181 131 144 chr5 192684372 192684423 -10401109 + L1ME3 LINE L1 5426 5476 -690 1740 123 51 25 chr5 192684423 192684738 -10400794 - AluSq SINE Alu 0 322 1 283 181 131 144 chr5 192684738 192684845 -10400687 + L1ME3 LINE L1 5476 5583 -583 911 94 123 41 chr5 192684845 192685015 -10400517 + MER21A LTR ERV1 1 184 -747 257 196 39 0 chr5 192685015 192685066 -10400466 + MER39 LTR ERV1 339 391 -316 2777 125 64 81 chr5 192685073 192685103 -10400429 + MER21A LTR ERV1 376 405 -526 1556 164 57 0 chr5 192685103 192685384 -10400148 + AluJb SINE Alu 9 305 -7 2777 125 64 81 chr5 192685384 192685919 -10399613 + MER21A LTR ERV1 405 931 0 1466 209 63 77 chr5 192685920 192686505 -10399027 + L1ME3 LINE L1 5583 6159 -3 208 344 111 11 chr5 192687275 192687464 -10398068 + L2 LINE L2 2555 2762 -552 260 268 65 47 chr5 192687501 192687529 -10398003 - MER102b DNA MER1_type -1087 341 315 1489 169 7 65 chr5 192687529 192687652 -10397880 + AluJo SINE Alu 12 141 -171 1461 176 16 62 chr5 192687652 192687959 -10397573 + AluJo SINE Alu 1 293 -19 1489 169 7 65 chr5 192687959 192688142 -10397390 + AluJo SINE Alu 141 300 -12 260 268 65 47 chr5 192688142 192688297 -10397235 - MER102b DNA MER1_type -1113 315 92 2110 137 16 0 chr5 192688301 192688607 -10396925 + AluSx SINE Alu 1 311 -1 2267 122 0 0 chr5 192688620 192688923 -10396609 + AluSx SINE Alu 1 303 -9 521 202 11 0 chr5 192689001 192689090 -10396442 + Charlie3 DNA MER1_type 1 90 -2620 987 225 64 4 chr5 192789111 192789539 -10295993 + MER68 LTR ERV1 42 538 -24 209 358 144 11 chr5 192789546 192789982 -10295550 + L2 LINE L2 2819 3312 -1 182 265 31 31 chr5 192790343 192790441 -10295091 - MIR SINE MIR -119 143 46 2019 128 31 0 chr5 192790575 192790865 -10294667 + AluJo SINE Alu 7 305 -7 656 266 23 17 chr5 192791965 192792138 -10293394 - MIR SINE MIR -51 211 38 576 305 50 18 chr5 192792413 192792692 -10292840 + L1ME LINE L1 5437 5724 -397 2068 147 7 0 chr5 192792798 192793098 -10292434 + AluSx SINE Alu 1 302 -10 878 171 0 0 chr5 192793098 192793227 -10292305 + AluSg/x SINE Alu 134 262 -50 2184 130 0 0 chr5 192793248 192793547 -10291985 - AluSx SINE Alu -13 299 1 1967 118 61 0 chr5 192793789 192794069 -10291463 - AluJo SINE Alu -15 297 1 268 274 120 17 chr5 192794778 192794895 -10290637 - L2 LINE L2 -5 3308 3180 340 225 90 18 chr5 192795161 192795272 -10290260 + MIR SINE MIR 93 211 -51 237 340 110 0 chr5 192796187 192796287 -10289245 + L2 LINE L2 3197 3307 -6 297 274 18 45 chr5 192796426 192796628 -10288904 + L1MC4a LINE L1 5686 5826 -507 2489 76 3 0 chr5 192796879 192797182 -10288350 - AluY SINE Alu -7 304 1 2411 83 3 7 chr5 192797210 192797511 -10288021 - AluSp SINE Alu -13 300 1 408 322 48 61 chr5 192797631 192798087 -10287445 + L1ME4a LINE L1 5484 5933 -188 2208 114 14 0 chr5 192798100 192798397 -10287135 + AluSp SINE Alu 3 303 -10 447 278 0 93 chr5 192798397 192798591 -10286941 - MIR SINE MIR -8 254 79 306 0 0 0 chr5 192798753 192798787 -10286745 + (TG)n Simple_repeat Simple_repeat 2 35 0 279 0 0 0 chr5 192798913 192798944 -10286588 + (TA)n Simple_repeat Simple_repeat 2 32 0 2776 33 0 3 chr5 192798944 192799250 -10286282 - AluY SINE Alu -6 305 1 239 310 56 28 chr5 192799626 192799768 -10285764 + MLT1K LTR MaLR 123 268 -320 484 293 154 0 chr5 192800103 192800291 -10285241 + MIR SINE MIR 12 228 -34 2404 102 0 9 chr5 192800534 192800849 -10284683 - AluSx SINE Alu 0 312 1 2241 116 3 0 chr5 192801053 192801356 -10284176 + AluSx SINE Alu 1 304 -8 2056 136 7 13 chr5 192801464 192801787 -10283745 + AluSx SINE Alu 1 312 0 2250 120 7 0 chr5 192802200 192802501 -10283031 + AluSg SINE Alu 1 303 -7 993 274 17 0 chr5 192802504 192802741 -10282791 - MIR SINE MIR -7 255 15 194 296 185 0 chr5 192802925 192803033 -10282499 - L2 LINE L2 -213 3059 2932 2416 83 0 3 chr5 192803067 192803369 -10282163 + AluSg SINE Alu 1 301 -9 253 225 0 28 chr5 192803391 192803462 -10282070 + LTR9 LTR ERV1 449 517 -95 222 346 84 20 chr5 192803693 192803895 -10281637 - L2 LINE L2 -405 2909 2695 566 191 0 9 chr5 192803905 192804015 -10281517 + FLAM_A SINE Alu 1 109 -33 2519 35 0 3 chr5 192804054 192804382 -10281150 + AluYa5 SINE Alu 1 327 0 410 311 0 15 chr5 192805004 192805136 -10280396 + MIR SINE MIR 24 153 -109 322 257 40 20 chr5 192805362 192805463 -10280069 - MIR SINE MIR -2 260 158 2402 100 0 7 chr5 192805506 192805815 -10279717 - AluSx SINE Alu -5 307 1 1071 171 23 0 chr5 192805818 192805994 -10279538 - AluJ SINE Alu -2 310 131 1218 87 6 12 chr5 192806009 192806170 -10279362 + AluSp SINE Alu 1 160 -153 207 0 0 0 chr5 192806195 192806218 -10279314 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 636 221 8 23 chr5 192806218 192806349 -10279183 - AluJ SINE Alu -172 130 2 2002 130 14 7 chr5 192806357 192806650 -10278882 - AluSg SINE Alu -15 295 1 1146 238 26 15 chr5 192806673 192806973 -10278559 - L1ME1 LINE L1 -6 6160 5857 2663 55 0 0 chr5 192807100 192807407 -10278125 - AluY SINE Alu -4 307 1 587 268 112 40 chr5 192808061 192808311 -10277221 + MLT1J LTR MaLR 32 299 -212 542 234 9 128 chr5 192808279 192808411 -10277121 + MLT1K LTR MaLR 321 416 -172 * 1926 148 3 7 chr5 192808411 192808709 -10276823 - AluJb SINE Alu -11 301 5 542 234 9 128 chr5 192808709 192808803 -10276729 + MLT1K LTR MaLR 416 520 -68 654 131 0 0 chr5 192809129 192809236 -10276296 + Ricksha DNA DNA 1 107 -1147 3912 168 45 34 chr5 192809260 192809865 -10275667 + Ricksha DNA DNA 2355 2939 -312 2292 118 0 0 chr5 192809865 192810169 -10275363 - AluSx SINE Alu -8 304 1 3912 168 45 34 chr5 192810169 192810473 -10275059 + Ricksha DNA DNA 2939 3238 -13 224 318 68 34 chr5 192810720 192810787 -10274745 + MIR SINE MIR 81 144 -118 2110 108 4 0 chr5 192810787 192811066 -10274466 + AluSx SINE Alu 21 300 -12 224 318 68 34 chr5 192811066 192811174 -10274358 + MIR SINE MIR 144 262 0 1409 117 0 24 chr5 192811476 192811682 -10273850 + AluSg/x SINE Alu 108 308 -4 243 278 124 0 chr5 192812410 192812507 -10273025 - MIR SINE MIR -72 136 28 183 226 283 0 chr5 192812505 192812611 -10272921 - L2 LINE L2 0 3272 3137 * 436 80 0 91 chr5 192812646 192812734 -10272798 + Alu SINE Alu 229 308 -2 2094 133 37 0 chr5 192812815 192813115 -10272417 - AluSq SINE Alu -2 311 1 352 273 41 8 chr5 192813482 192813603 -10271929 + MIR SINE MIR 29 153 -109 201 195 0 0 chr5 192814028 192814069 -10271463 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 267 246 220 8 chr5 192814604 192814722 -10270810 + MIR SINE MIR 65 207 -55 2167 131 0 0 chr5 192814733 192815038 -10270494 + AluSx SINE Alu 1 305 -7 440 272 69 28 chr5 192815104 192815322 -10270210 + MIR SINE MIR 25 249 -13 2553 53 7 3 chr5 192815517 192815818 -10269714 - AluY SINE Alu -9 302 1 1647 179 117 20 chr5 192816275 192816627 -10268905 + MSTD LTR MaLR 10 395 -1 34 0 0 0 chr5 192816807 192816841 -10268691 + AT_rich Low_complexity Low_complexity 1 34 0 236 329 178 16 chr5 192817256 192817560 -10267972 - L2 LINE L2 -10 3262 2910 183 80 0 0 chr5 192817675 192817700 -10267832 + (TG)n Simple_repeat Simple_repeat 2 26 0 202 385 34 8 chr5 192817711 192817828 -10267704 - L2 LINE L2 -565 2749 2630 244 304 214 42 chr5 192817907 192818308 -10267224 + MLT1K LTR MaLR 103 572 -16 778 211 80 0 chr5 192818396 192818571 -10266961 - MER5A DNA MER1_type 0 189 1 2028 172 15 10 chr5 192819010 192819111 -10266421 + L1M4 LINE L1 5098 5197 -987 1739 181 0 47 chr5 192819111 192819431 -10266101 + AluJb SINE Alu 1 305 -7 2028 172 15 10 chr5 192819431 192819715 -10265817 + L1M4 LINE L1 5197 5487 -697 2284 120 3 0 chr5 192819715 192820016 -10265516 + AluSx SINE Alu 1 302 -10 2028 172 15 10 chr5 192820016 192820206 -10265326 + L1M4 LINE L1 5487 5675 -509 2136 120 40 0 chr5 192820241 192820540 -10264992 + AluSx SINE Alu 1 311 -1 743 219 45 16 chr5 192820547 192820793 -10264739 + L1MB1 LINE L1 3252 3504 -2642 2269 74 3 7 chr5 192820799 192821109 -10264423 + AluY SINE Alu 1 309 0 1931 165 62 80 chr5 192821109 192821314 -10264218 - MER41C LTR ERV1 -113 441 234 1598 69 19 0 chr5 192821314 192821530 -10264002 - L1PA7 LINE L1 0 6154 5935 1931 165 62 80 chr5 192821530 192821773 -10263759 - MER41C LTR ERV1 -320 234 1 4398 198 19 86 chr5 192821777 192822083 -10263449 + L1MB1 LINE L1 3724 4049 -2097 2488 52 3 42 chr5 192822083 192822393 -10263139 + AluY SINE Alu 1 298 -13 4398 198 19 86 chr5 192822393 192822603 -10262929 + L1MB1 LINE L1 4049 4272 -1874 2377 102 0 7 chr5 192822603 192822907 -10262625 - AluSg SINE Alu -8 302 1 4398 198 19 86 chr5 192822907 192823216 -10262316 + L1MB1 LINE L1 4272 4600 -1546 2579 62 0 7 chr5 192823216 192823521 -10262011 + AluY SINE Alu 1 303 -8 4398 198 19 86 chr5 192823521 192823866 -10261666 + L1MB1 LINE L1 4600 4707 -1439 782 158 47 0 chr5 192823866 192823993 -10261539 + FLAM_C SINE Alu 1 133 0 4398 198 19 86 chr5 192823993 192824293 -10261239 + L1MB1 LINE L1 4707 5026 -1120 4912 161 10 29 chr5 192824297 192824900 -10260632 + L1MB1 LINE L1 5029 5600 -568 2384 112 0 0 chr5 192824900 192825212 -10260320 + AluSx SINE Alu 1 312 0 4912 161 10 29 chr5 192825212 192825770 -10259762 + L1MB1 LINE L1 5600 6167 -1 2141 112 6 34 chr5 192825780 192826101 -10259431 + AluJo SINE Alu 1 312 0 432 248 92 0 chr5 192826443 192826552 -10258980 - L2 LINE L2 -1 3312 3194 286 218 141 0 chr5 192827016 192827094 -10258438 - MIR SINE MIR -18 244 156 328 237 17 68 chr5 192827099 192827217 -10258315 + MIR SINE MIR 151 262 0 336 128 244 0 chr5 192827225 192827303 -10258229 - MIR SINE MIR -101 161 65 1685 139 4 4 chr5 192827619 192827878 -10257654 + AluSg SINE Alu 50 308 -2 238 312 28 28 chr5 192828061 192828170 -10257362 + MIR SINE MIR 38 146 -62 193 255 20 0 chr5 192828290 192828341 -10257191 + L2 LINE L2 3221 3272 0 545 315 91 5 chr5 192828514 192828711 -10256821 - MIR SINE MIR -15 247 34 223 284 60 0 chr5 192828726 192828793 -10256739 + MIR SINE MIR 78 148 -60 189 169 46 108 chr5 192829304 192829369 -10256163 - MIR3 SINE MIR -29 179 119 480 299 60 10 chr5 192830124 192830325 -10255207 + MIR SINE MIR 30 240 -22 307 214 99 121 chr5 192830556 192830738 -10254794 + L2 LINE L2 3136 3313 0 4345 159 72 31 chr5 192831241 192831869 -10253663 - MER21A LTR ERV1 0 931 255 2322 107 0 7 chr5 192831869 192832177 -10253355 - AluSg SINE Alu -4 306 1 4345 159 72 31 chr5 192832177 192832443 -10253089 - MER21A LTR ERV1 -676 255 1 200 349 46 0 chr5 192832641 192832750 -10252782 - MIR SINE MIR -109 153 40 287 293 89 67 chr5 192833247 192833389 -10252143 + MIR SINE MIR 13 163 -99 1595 165 99 0 chr5 192833389 192833662 -10251870 + AluSx SINE Alu 1 300 -12 287 293 89 67 chr5 192833662 192833744 -10251788 + MIR SINE MIR 163 242 -20 399 21 0 0 chr5 192833981 192834029 -10251503 + (TG)n Simple_repeat Simple_repeat 2 49 0 2581 77 0 3 chr5 192834249 192834561 -10250971 + AluSq SINE Alu 1 311 -2 391 245 61 37 chr5 192834566 192834684 -10250848 - MIR3 SINE MIR -37 171 46 2469 93 0 0 chr5 192834684 192834996 -10250536 + AluSq SINE Alu 1 312 -1 391 245 61 37 chr5 192834996 192835040 -10250492 - MIR3 SINE MIR -162 46 5 448 267 91 32 chr5 192835581 192835802 -10249730 - MIR SINE MIR -2 260 27 2399 87 3 13 chr5 192835817 192836129 -10249403 - AluSg SINE Alu -1 309 1 408 285 11 50 chr5 192836129 192836301 -10249231 + L2 LINE L2 3122 3288 -25 618 280 65 43 chr5 192836343 192836711 -10248821 + L2 LINE L2 2845 3220 -93 409 246 88 9 chr5 192836711 192836825 -10248707 - MER63 DNA MER1_type -282 780 32 400 248 50 0 chr5 192837021 192837142 -10248390 + Charlie5 DNA MER1_type 1 127 -2485 * 1775 148 23 51 chr5 192837139 192837490 -10248042 + Charlie5 DNA MER1_type 2234 2575 -49 2245 106 3 0 chr5 192837490 192837813 -10247719 + AluSp SINE Alu 1 324 0 1775 148 23 51 chr5 192837813 192837853 -10247679 + Charlie5 DNA MER1_type 2575 2615 -9 305 294 22 22 chr5 192838280 192838416 -10247116 + L2 LINE L2 2919 3054 -218 235 337 110 42 chr5 192838518 192838585 -10246947 + L2 LINE L2 2695 2756 -558 689 211 70 49 chr5 192838585 192838770 -10246762 - MER5A DNA MER1_type 0 189 1 235 337 110 42 chr5 192838770 192838966 -10246566 + L2 LINE L2 2756 2976 -338 662 254 94 10 chr5 192839234 192839435 -10246097 + MIR SINE MIR 44 261 -1 201 39 0 0 chr5 192839590 192839616 -10245916 + (TGGG)n Simple_repeat Simple_repeat 4 29 0 2241 118 0 0 chr5 192839702 192839999 -10245533 + AluSx SINE Alu 2 298 -14 198 0 0 0 chr5 192840072 192840094 -10245438 + (TAAAAA)n Simple_repeat Simple_repeat 3 24 0 2297 114 0 0 chr5 192840198 192840497 -10245035 + AluSx SINE Alu 1 299 -13 979 259 40 0 chr5 192840675 192840922 -10244610 - MIR SINE MIR -3 259 3 2238 107 3 0 chr5 192841762 192842052 -10243480 + AluSg SINE Alu 1 291 -19 2141 137 3 3 chr5 192842076 192842376 -10243156 - AluSx SINE Alu -12 300 1 3236 167 54 40 chr5 192842563 192842868 -10242664 + L1MB4 LINE L1 5447 5746 -434 2078 94 4 0 chr5 192842868 192843135 -10242397 + AluSx SINE Alu 38 305 -7 3236 167 54 40 chr5 192843135 192843553 -10241979 + L1MB4 LINE L1 5746 6180 0 1696 157 4 11 chr5 192843743 192844011 -10241521 + AluJo SINE Alu 1 266 -46 2034 147 6 6 chr5 192844025 192844338 -10241194 + AluSq SINE Alu 1 313 0 2472 95 0 0 chr5 192844341 192844645 -10240887 + AluSg SINE Alu 1 304 -6 2276 119 0 3 chr5 192844677 192844972 -10240560 + AluSx SINE Alu 1 294 -18 191 348 125 5 chr5 192845440 192845624 -10239908 - L2 LINE L2 -11 3261 3056 2397 99 0 3 chr5 192845655 192845958 -10239574 + AluSx SINE Alu 1 302 -10 246 277 169 20 chr5 192846167 192846315 -10239217 - MIR SINE MIR -51 211 42 2197 112 10 13 chr5 192846544 192846857 -10238675 + AluSx SINE Alu 1 312 0 218 171 0 0 chr5 192847052 192847087 -10238445 + CT-rich Low_complexity Low_complexity 2 36 0 454 271 86 41 chr5 192847616 192847837 -10237695 - MIR SINE MIR 0 262 32 387 224 24 12 chr5 192848330 192848415 -10237117 + MLT1K LTR MaLR 139 224 -364 2528 78 0 0 chr5 192848415 192848722 -10236810 + AluSq SINE Alu 1 307 -6 393 347 20 7 chr5 192848933 192849080 -10236452 - MIR SINE MIR -107 155 7 196 244 122 35 chr5 192849069 192849184 -10236348 + MIR3 SINE MIR 63 187 -21 * 1029 260 55 99 chr5 192850005 192850264 -10235268 + MLT1K LTR MaLR 22 248 -340 2485 70 3 10 chr5 192850264 192850578 -10234954 - AluSp SINE Alu -1 312 1 1029 260 55 99 chr5 192850578 192850845 -10234687 + MLT1K LTR MaLR 248 525 -63 535 324 117 54 chr5 192851137 192851365 -10234167 + L1MC4a LINE L1 5441 5600 -521 2278 118 3 0 chr5 192851365 192851670 -10233862 + AluSg SINE Alu 1 306 -4 535 324 117 54 chr5 192851670 192851903 -10233629 + L1MC4a LINE L1 5600 5817 -304 805 143 131 23 chr5 192852134 192852309 -10233223 - MER3 DNA MER1_type 0 209 16 353 296 43 17 chr5 192853108 192853278 -10232254 - MIR3 SINE MIR -53 155 12 272 248 10 0 chr5 192853939 192854040 -10231492 + (TGGA)n Simple_repeat Simple_repeat 2 103 0 273 277 60 0 chr5 192854335 192854418 -10231114 + MIR SINE MIR 46 133 -75 250 236 56 22 chr5 192855492 192855581 -10229951 - MIR SINE MIR -69 193 102 439 279 37 25 chr5 192855745 192855906 -10229626 + MIR SINE MIR 57 219 -43 1966 148 0 4 chr5 192855917 192856194 -10229338 + AluSx SINE Alu 1 276 -36 320 64 21 0 chr5 192856200 192856247 -10229285 + (AATAG)n Simple_repeat Simple_repeat 1 48 0 294 294 32 70 chr5 192856324 192856385 -10229147 - L1ME4a LINE L1 -195 5926 5864 2083 106 10 36 chr5 192856385 192856687 -10228845 + AluSq SINE Alu 1 294 -19 294 294 32 70 chr5 192856687 192856812 -10228720 - L1ME4a LINE L1 -257 5864 5747 385 270 45 9 chr5 192857033 192857144 -10228388 - MIR SINE MIR -93 169 55 2526 77 7 0 chr5 192857183 192857482 -10228050 + AluSx SINE Alu 1 301 -11 319 280 20 3 chr5 192858407 192858531 -10227001 - MIR SINE MIR -69 139 9 2319 96 0 7 chr5 192858642 192858943 -10226589 - AluSq SINE Alu 0 313 15 369 314 160 27 chr5 192858964 192859302 -10226230 - L2 LINE L2 -10 3303 2921 1295 163 4 44 chr5 192859480 192859732 -10225800 - AluJo SINE Alu 0 312 71 219 338 0 12 chr5 192859817 192859897 -10225635 + G-rich Low_complexity Low_complexity 27 105 0 473 260 33 9 chr5 192860257 192860439 -10225093 + MIR3 SINE MIR 15 204 -58 242 164 213 0 chr5 192860466 192860527 -10225005 + L2 LINE L2 3222 3295 -18 649 249 84 9 chr5 192860533 192860746 -10224786 - MIR SINE MIR -6 256 28 1670 162 60 57 chr5 192861236 192861378 -10224154 + MLT1A1 LTR MaLR 1 141 -224 1961 132 20 10 chr5 192861378 192861674 -10223858 + AluSx SINE Alu 1 299 -13 1670 162 60 57 chr5 192861674 192861883 -10223649 + MLT1A1 LTR MaLR 141 353 -12 762 234 88 0 chr5 192861989 192862271 -10223261 + MER33 DNA MER1_type 1 359 -4 2064 96 3 3 chr5 192862309 192862613 -10222919 - AluSx SINE Alu 0 304 1 365 287 9 0 chr5 192862619 192862734 -10222798 - Charlie8 DNA MER1_type -2258 159 44 369 275 62 38 chr5 192863040 192863230 -10222302 - MIR SINE MIR -62 146 10 889 212 37 28 chr5 192863300 192863517 -10222015 + MER20 DNA MER1_type 1 219 0 184 333 159 30 chr5 192863707 192863839 -10221693 - MIR3 SINE MIR -55 153 5 2212 85 0 3 chr5 192864667 192864960 -10220572 + AluSx SINE Alu 1 292 -20 2140 83 0 58 chr5 192864994 192865307 -10220225 + AluSx SINE Alu 1 295 -17 227 206 137 41 chr5 192865878 192865951 -10219581 + L2 LINE L2 3155 3234 -38 1774 111 0 4 chr5 192865962 192866223 -10219309 - AluSx SINE Alu -6 306 47 612 129 0 0 chr5 192866223 192866316 -10219216 + AluSg/x SINE Alu 207 299 -10 232 239 141 0 chr5 192866371 192866442 -10219090 + L1ME4a LINE L1 5968 6048 -73 2325 86 3 0 chr5 192866509 192866813 -10218719 + AluSg SINE Alu 1 305 -5 180 0 0 0 chr5 192866857 192866877 -10218655 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1053 164 0 35 chr5 192866888 192867036 -10218496 - AluJb SINE Alu -34 278 137 2083 116 0 3 chr5 192867036 192867337 -10218195 - AluSg SINE Alu -10 300 1 1053 164 0 35 chr5 192867337 192867389 -10218143 - AluJb SINE Alu -175 137 85 1931 153 0 0 chr5 192867412 192867720 -10217812 + AluJo SINE Alu 3 310 -2 1814 86 25 32 chr5 192867942 192868220 -10217312 - AluSx SINE Alu -14 298 23 204 288 34 0 chr5 192868865 192868924 -10216608 + MIR3 SINE MIR 9 69 -139 1987 117 0 28 chr5 192869129 192869446 -10216086 - AluSx SINE Alu -4 308 1 229 329 26 0 chr5 192869579 192869655 -10215877 + L3 LINE CR1 767 844 -733 1974 118 0 0 chr5 192869749 192870052 -10215480 - AluSc SINE Alu 0 303 1 2156 111 0 7 chr5 192870477 192870783 -10214749 + AluSx SINE Alu 1 304 -8 1731 163 7 0 chr5 192870827 192871134 -10214398 + AluJb SINE Alu 1 309 -3 425 265 179 31 chr5 192871158 192871320 -10214212 - MER5A DNA MER1_type 0 189 4 24 32 0 0 chr5 192872725 192872756 -10212776 + GC_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 192873516 192873551 -10211981 + AT_rich Low_complexity Low_complexity 1 35 0 811 154 4 21 chr5 192874282 192874523 -10211009 + GA-rich Low_complexity Low_complexity 1 236 0 1199 191 40 53 chr5 192874542 192874841 -10210691 + L1MB7 LINE L1 5872 6166 -18 863 305 70 60 chr5 192874865 192874934 -10210598 + L1 LINE L1 3185 3252 -2894 2152 114 0 13 chr5 192874934 192875249 -10210283 + AluSx SINE Alu 1 311 -1 863 305 70 60 chr5 192875249 192875497 -10210035 + L1 LINE L1 3252 3511 -2635 2054 127 0 9 chr5 192875497 192875812 -10209720 + AluSx SINE Alu 1 312 0 863 305 70 60 chr5 192875812 192875994 -10209538 + L1 LINE L1 3511 3690 -2456 1680 156 14 0 chr5 192875999 192876282 -10209250 + AluJb SINE Alu 1 287 -25 2244 93 0 7 chr5 192876341 192876643 -10208889 - AluSc SINE Alu -9 300 1 317 262 95 12 chr5 192876676 192876844 -10208688 + L1 LINE L1 3743 3924 -2222 441 159 0 0 chr5 192876852 192876921 -10208611 - LTR16C LTR ERVL -2 489 421 1648 164 47 0 chr5 192876954 192877252 -10208280 + AluJo SINE Alu 1 312 0 1346 172 3 101 chr5 192877263 192877394 -10208138 + AluJb SINE Alu 5 147 -165 2180 91 7 0 chr5 192877394 192877703 -10207829 + AluY SINE Alu 1 311 0 1346 172 3 101 chr5 192877703 192877897 -10207635 + AluJb SINE Alu 147 298 -14 2110 100 0 25 chr5 192877899 192878218 -10207314 + AluY SINE Alu 1 311 0 306 314 73 36 chr5 192878226 192878446 -10207086 - L1M4 LINE L1 -3037 3109 2882 2014 109 14 10 chr5 192878890 192879184 -10206348 - AluSx SINE Alu -17 295 1 553 251 73 55 chr5 192879279 192879498 -10206034 + MIR SINE MIR 40 262 0 440 0 36 0 chr5 192879639 192879694 -10205838 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 234 0 0 0 chr5 192880285 192880311 -10205221 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1822 87 17 77 chr5 192880313 192880611 -10204921 - AluSx SINE Alu -32 280 1 2026 97 38 0 chr5 192880871 192881161 -10204371 - AluSp SINE Alu -12 301 1 188 97 129 0 chr5 192881555 192881586 -10203946 + MIR SINE MIR 54 88 -174 2280 85 3 0 chr5 192881594 192881888 -10203644 - AluSp SINE Alu -14 299 5 456 306 153 6 chr5 192881905 192882062 -10203470 + MER5A DNA MER1_type 4 183 -6 688 110 10 0 chr5 192882109 192882209 -10203323 - LTR12 LTR ERV1 -133 581 481 318 264 11 0 chr5 192882210 192882301 -10203231 - LTR30 LTR ERV1 -79 643 552 1594 100 20 60 chr5 192882301 192882592 -10202940 - LTR12 LTR ERV1 -406 2032 57 267 231 0 0 chr5 192882592 192882644 -10202888 - LTR30 LTR ERV1 -670 52 1 1541 168 0 0 chr5 192882712 192882968 -10202564 + AluJo SINE Alu 1 256 -56 21 0 0 0 chr5 192882968 192882989 -10202543 + AT_rich Low_complexity Low_complexity 1 21 0 2164 104 3 0 chr5 192883101 192883399 -10202133 - AluSg SINE Alu -11 299 1 198 304 65 111 chr5 192883456 192883673 -10201859 + L2 LINE L2 3022 3228 -44 1935 113 62 3 chr5 192884413 192884705 -10200827 - AluSx SINE Alu -3 309 1 1865 122 0 37 chr5 192885436 192885579 -10199953 + AluSx SINE Alu 1 148 -164 1925 141 7 0 chr5 192885579 192885883 -10199649 + AluSp SINE Alu 1 306 -7 1865 122 0 37 chr5 192885883 192886062 -10199470 + AluSx SINE Alu 148 312 0 813 146 0 0 chr5 192886213 192886336 -10199196 + FLAM_A SINE Alu 1 123 -10 430 40 0 222 chr5 192886492 192886544 -10198988 - MADE1 DNA Mariner -3 77 55 2218 86 26 3 chr5 192886544 192886846 -10198686 + AluY SINE Alu 1 309 -2 430 40 0 222 chr5 192886846 192886892 -10198640 - MADE1 DNA Mariner -25 55 1 2048 126 0 0 chr5 192886912 192887205 -10198327 + AluSx SINE Alu 2 294 -18 2172 93 3 0 chr5 192887205 192887496 -10198036 + AluSg SINE Alu 1 292 -18 1857 120 39 3 chr5 192887955 192888239 -10197293 - AluSx SINE Alu -18 294 1 2121 94 0 3 chr5 192888651 192888938 -10196594 - AluSg SINE Alu -24 286 1 524 308 129 9 chr5 192889062 192889286 -10196246 - MIR SINE MIR -1 261 11 204 40 0 0 chr5 192889427 192889452 -10196080 + (A)n Simple_repeat Simple_repeat 1 25 0 805 154 0 0 chr5 192890192 192890315 -10195217 + AluJb SINE Alu 2 124 -188 2139 95 34 0 chr5 192890587 192890883 -10194649 - AluSq SINE Alu -7 306 1 313 110 44 165 chr5 192891518 192891609 -10193923 - MADE1 DNA Mariner 0 80 1 384 321 62 47 chr5 192891981 192892320 -10193212 + L1MC4a LINE L1 4881 5224 -922 389 271 157 21 chr5 192892323 192892603 -10192929 + L1MC4a LINE L1 5254 5571 -2237 537 259 59 47 chr5 192892645 192892881 -10192651 + L1MC4a LINE L1 5668 5906 -1902 779 244 34 0 chr5 192892930 192893106 -10192426 + MER5A DNA MER1_type 2 183 -6 1344 188 4 8 chr5 192893269 192893530 -10192002 - AluJo SINE Alu -52 260 1 192 40 0 0 chr5 192893543 192893568 -10191964 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2224 56 0 21 chr5 192893569 192893895 -10191637 + AluY SINE Alu 1 320 0 21 0 0 0 chr5 192894142 192894163 -10191369 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr5 192895833 192895878 -10189654 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 22 56 0 0 chr5 192895914 192895950 -10189582 + AT_rich Low_complexity Low_complexity 1 36 0 2120 113 3 3 chr5 192897141 192897451 -10188081 - AluSq SINE Alu -3 310 1 2049 138 0 0 chr5 192897478 192897776 -10187756 - AluSx SINE Alu -14 298 1 692 113 0 10 chr5 192898111 192898208 -10187324 - FLAM_A SINE Alu -22 120 25 2250 92 7 0 chr5 192898266 192898570 -10186962 - AluSp SINE Alu -7 306 1 6197 141 125 88 chr5 192899323 192900402 -10185130 + L1MCa LINE L1 19 1057 -5369 1895 90 11 11 chr5 192900402 192900679 -10184853 + AluSq SINE Alu 36 312 -1 6197 141 125 88 chr5 192900679 192900956 -10184576 + L1MCa LINE L1 1057 1322 -5104 783 184 0 22 chr5 192900956 192901092 -10184440 + FLAM_C SINE Alu 1 133 0 6197 141 125 88 chr5 192901092 192901160 -10184372 + L1MCa LINE L1 1322 1386 -5040 1686 155 3 34 chr5 192901160 192901457 -10184075 + AluJb SINE Alu 1 288 -24 6197 141 125 88 chr5 192901457 192901615 -10183917 + L1MCa LINE L1 1386 1537 -4889 2064 113 0 25 chr5 192901615 192901934 -10183598 + AluY SINE Alu 1 311 0 6197 141 125 88 chr5 192901934 192901967 -10183565 + L1MCa LINE L1 1537 1697 -4729 1377 177 37 30 chr5 192901967 192902267 -10183265 - AluJo SINE Alu -8 304 3 7131 206 57 29 chr5 192902267 192902986 -10182546 + L1M4 LINE L1 2423 3121 -3025 1530 171 33 10 chr5 192902986 192903291 -10182241 + AluJo SINE Alu 1 312 0 7131 206 57 29 chr5 192903291 192903750 -10181782 + L1M4 LINE L1 3121 3566 -2580 3661 181 54 20 chr5 192903750 192904459 -10181073 + MER44D DNA MER2_type 1 605 0 7131 206 57 29 chr5 192904459 192904839 -10180693 + L1M4 LINE L1 3566 3934 -2212 1915 115 40 0 chr5 192904839 192905135 -10180397 + AluSp SINE Alu 1 308 -5 7131 206 57 29 chr5 192905135 192905701 -10179831 + L1M4 LINE L1 3934 4608 -1538 1540 190 13 7 chr5 192905707 192906007 -10179525 + AluJo SINE Alu 1 302 -10 3021 130 10 18 chr5 192906008 192906514 -10179018 + L1MC1 LINE L1 5820 6321 -12 180 343 36 29 chr5 192906858 192906995 -10178537 - L2 LINE L2 -6 3266 3129 214 304 72 14 chr5 192907368 192907437 -10178095 - L2 LINE L2 -16 3256 3184 2178 75 54 0 chr5 192907808 192908102 -10177430 + AluSg SINE Alu 1 310 0 695 207 86 11 chr5 192908105 192908279 -10177253 - MIR SINE MIR -11 251 65 1921 151 26 64 chr5 192908616 192908773 -10176759 + THE1C LTR MaLR 1 163 -212 1892 145 30 0 chr5 192908773 192909076 -10176456 - AluSx SINE Alu 0 312 1 1921 151 26 64 chr5 192909076 192909308 -10176224 + THE1C LTR MaLR 163 375 0 304 182 141 10 chr5 192910129 192910228 -10175304 + L1ME1 LINE L1 6034 6145 -21 1128 143 0 6 chr5 192910419 192910601 -10174931 - AluSg/x SINE Alu -8 302 122 334 279 18 18 chr5 192910888 192910999 -10174533 + MIR SINE MIR 148 258 -4 1041 106 0 0 chr5 192912036 192912168 -10173364 - AluY SINE Alu -179 132 1 2147 77 84 3 chr5 192912178 192912464 -10173068 - AluSg SINE Alu -1 309 1 213 321 164 37 chr5 192912660 192912794 -10172738 - MIR3 SINE MIR -14 194 44 * 339 275 148 27 chr5 192912767 192912916 -10172616 + MIR SINE MIR 34 200 -62 2313 107 0 0 chr5 192912928 192913236 -10172296 + AluSx SINE Alu 5 312 0 27 0 0 0 chr5 192913349 192913376 -10172156 + AT_rich Low_complexity Low_complexity 1 27 0 2724 36 0 3 chr5 192913704 192914011 -10171521 + AluY SINE Alu 1 306 -5 350 151 0 0 chr5 192914773 192914826 -10170706 + AluSp/q SINE Alu 244 296 -7 665 254 20 55 chr5 192914926 192915140 -10170392 - MIR SINE MIR -7 255 53 2492 84 0 0 chr5 192915259 192915568 -10169964 - AluY SINE Alu -2 309 1 2143 127 0 25 chr5 192916474 192916789 -10168743 + AluSx SINE Alu 1 307 -5 1490 188 50 7 chr5 192917064 192917183 -10168349 + AluJb SINE Alu 1 113 -199 245 27 54 0 chr5 192917183 192917220 -10168312 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1490 188 50 7 chr5 192917220 192917377 -10168155 + AluJb SINE Alu 113 289 -23 1604 100 116 12 chr5 192917380 192917631 -10167901 + AluSx SINE Alu 36 312 0 21 36 0 0 chr5 192918379 192918407 -10167125 + AT_rich Low_complexity Low_complexity 1 28 0 1894 157 7 7 chr5 192919109 192919409 -10166123 + AluJb SINE Alu 1 300 -12 913 136 0 36 chr5 192919433 192919573 -10165959 + L1MC1 LINE L1 6182 6316 -17 235 260 0 0 chr5 192920779 192920829 -10164703 - MIR SINE MIR -121 87 38 186 194 0 0 chr5 192920823 192920859 -10164673 - L2 LINE L2 -1 3312 3277 * 2203 89 4 4 chr5 192921596 192921877 -10163655 - AluSc SINE Alu -28 281 1 203 292 45 22 chr5 192922212 192922301 -10163231 + MIR SINE MIR 167 257 -5 215 125 25 0 chr5 192923506 192923546 -10161986 + (CATA)n Simple_repeat Simple_repeat 3 43 0 220 197 121 0 chr5 192923653 192923719 -10161813 - MIR3 SINE MIR -15 193 120 2022 83 0 76 chr5 192923792 192923911 -10161621 + AluSx SINE Alu 3 129 -177 2283 102 0 0 chr5 192923911 192924206 -10161326 - AluSp SINE Alu -18 295 1 2022 83 0 76 chr5 192924206 192924413 -10161119 + AluSx SINE Alu 129 306 0 22 35 0 0 chr5 192924845 192924874 -10160658 + AT_rich Low_complexity Low_complexity 1 29 0 780 209 0 0 chr5 192925289 192925418 -10160114 + FLAM_C SINE Alu 1 129 -14 2217 106 17 7 chr5 192925617 192925919 -10159613 + AluSq SINE Alu 1 305 -8 1641 182 4 14 chr5 192926218 192926498 -10159034 + AluJb SINE Alu 1 277 -35 1458 162 55 12 chr5 192926517 192926770 -10158762 + MSTB LTR MaLR 163 426 0 23 0 0 0 chr5 192926795 192926818 -10158714 + AT_rich Low_complexity Low_complexity 1 23 0 383 233 0 0 chr5 192926920 192926993 -10158539 + MER20 DNA MER1_type 1 73 -146 285 231 0 15 chr5 192926993 192927058 -10158474 - L1MC5 LINE L1 -586 7375 7312 598 269 169 11 chr5 192927123 192927472 -10158060 - L1MC4 LINE L1 -662 7380 6977 869 144 0 0 chr5 192927488 192927613 -10157919 - FLAM_C SINE Alu -18 125 1 24 0 0 0 chr5 192927613 192927637 -10157895 + AT_rich Low_complexity Low_complexity 1 24 0 793 196 107 77 chr5 192927778 192928040 -10157492 + MLT1A1 LTR MaLR 2 294 -71 2190 73 0 7 chr5 192928040 192928312 -10157220 - AluSq SINE Alu -7 306 37 793 196 107 77 chr5 192928312 192928361 -10157171 + MLT1A1 LTR MaLR 294 340 -25 329 257 0 0 chr5 192928393 192928467 -10157065 + MLT-int LTR MaLR 668 741 -994 2375 93 0 3 chr5 192928781 192929083 -10156449 - AluSp SINE Alu -12 301 1 2327 91 3 3 chr5 192929207 192929514 -10156018 - AluSq SINE Alu -6 307 1 352 326 7 22 chr5 192929791 192929929 -10155603 + L1ME LINE L1 781 916 -5614 1725 150 4 0 chr5 192929953 192930219 -10155313 + AluSx SINE Alu 38 304 -8 1031 230 32 85 chr5 192930286 192930721 -10154811 + L1ME LINE L1 926 1337 -5206 703 206 98 100 chr5 192930741 192930927 -10154605 + L1ME LINE L1 2397 2582 -3958 2247 109 7 0 chr5 192930927 192931229 -10154303 - AluSx SINE Alu -8 304 1 2167 119 26 0 chr5 192931237 192931539 -10153993 - AluSg SINE Alu 0 310 1 703 206 98 100 chr5 192931539 192931853 -10153679 + L1ME LINE L1 2589 2908 -3632 702 195 114 13 chr5 192931856 192932005 -10153527 + FRAM SINE Alu 1 164 -2 2482 228 72 11 chr5 192932016 192932776 -10152756 + L1ME LINE L1 2706 3512 -3028 2222 113 0 0 chr5 192932793 192933085 -10152447 + AluSg SINE Alu 1 292 -18 1030 187 0 0 chr5 192933091 192933262 -10152270 + AluSg/x SINE Alu 125 295 -15 873 200 7 0 chr5 192933267 192933422 -10152110 + AluJb SINE Alu 126 281 -31 227 219 287 6 chr5 192933433 192933597 -10151935 + L1ME LINE L1 3527 3736 -2804 2481 87 0 3 chr5 192933601 192933913 -10151619 + AluSx SINE Alu 1 311 -1 810 174 106 198 chr5 192933914 192934061 -10151471 + L1ME LINE L1 3967 4126 -2414 403 226 108 21 chr5 192934061 192934154 -10151378 + FLAM_A SINE Alu 2 102 -40 810 174 106 198 chr5 192934154 192934464 -10151068 + L1ME LINE L1 4126 4465 -2075 1857 97 0 35 chr5 192934464 192934744 -10150788 + AluSq SINE Alu 39 309 0 1766 183 174 11 chr5 192934744 192935220 -10150312 + L1MC4 LINE L1 7264 7817 -225 1615 102 4 9 chr5 192935220 192935445 -10150087 + AluJb SINE Alu 85 308 -4 2181 77 17 20 chr5 192935518 192935817 -10149715 + AluY SINE Alu 1 298 -13 1510 209 49 51 chr5 192935870 192936343 -10149189 + L1M1 LINE L1 2620 3091 -4474 415 271 28 0 chr5 192936422 192936529 -10149003 + MIR SINE MIR 142 251 -11 291 216 88 59 chr5 192936539 192936641 -10148891 - MIR SINE MIR -150 112 8 946 199 11 0 chr5 192937517 192937693 -10147839 - AluJo SINE Alu -14 298 121 2092 126 0 0 chr5 192937943 192938237 -10147295 - AluSc SINE Alu -15 294 1 22 35 0 0 chr5 192938253 192938282 -10147250 + AT_rich Low_complexity Low_complexity 1 29 0 2469 64 3 0 chr5 192938586 192938882 -10146650 - AluSg SINE Alu -13 297 1 2451 93 0 0 chr5 192940292 192940604 -10144928 + AluSq SINE Alu 1 312 -1 959 187 76 5 chr5 192940872 192941070 -10144462 - AluJb SINE Alu -17 295 84 2203 101 10 0 chr5 192941124 192941412 -10144120 + AluSq SINE Alu 1 291 -22 6745 188 55 2 chr5 192941465 192943627 -10141905 - L1PA15 LINE L1 0 6165 3956 2274 104 0 0 chr5 192943627 192943926 -10141606 - AluSg SINE Alu -11 299 1 240 172 17 35 chr5 192944041 192944099 -10141433 + (TATG)n Simple_repeat Simple_repeat 4 60 0 1625 166 28 4 chr5 192944351 192944718 -10140814 - L1MB7 LINE L1 -356 5828 5323 2170 131 0 0 chr5 192944718 192945015 -10140517 - AluSx SINE Alu -15 297 1 1109 152 0 0 chr5 192945024 192945035 -10140497 - AluSg/x SINE Alu -19 293 283 216 0 0 0 chr5 192945035 192945059 -10140473 + (TG)n Simple_repeat Simple_repeat 1 24 0 1109 152 0 0 chr5 192945059 192945212 -10140320 - AluSg/x SINE Alu -28 284 129 435 171 0 14 chr5 192945216 192945286 -10140246 - AluJ/FRAM SINE Alu -19 293 225 332 149 0 0 chr5 192945401 192945468 -10140064 - L1MB7 LINE L1 -1104 5042 4976 21 0 0 0 chr5 192945498 192945519 -10140013 + AT_rich Low_complexity Low_complexity 1 21 0 752 205 0 0 chr5 192945529 192945646 -10139886 - FLAM_C SINE Alu -25 118 2 1124 184 10 88 chr5 192945647 192945764 -10139768 - L1MB7 LINE L1 -1154 4992 4867 2192 122 3 0 chr5 192945764 192946060 -10139472 - AluSq SINE Alu -16 297 1 1124 184 10 88 chr5 192946060 192946236 -10139296 - L1MB7 LINE L1 -1279 4867 4722 1468 79 24 110 chr5 192946363 192946556 -10138976 - L1PA14 LINE L1 -9 6152 5985 2302 92 13 3 chr5 192946556 192946860 -10138672 - AluSx SINE Alu -5 307 1 1468 79 24 110 chr5 192946860 192946920 -10138612 - L1PA14 LINE L1 -176 5985 5921 234 30 0 0 chr5 192946969 192947002 -10138530 - AluSp SINE Alu -11 292 260 1543 108 9 9 chr5 192947007 192947087 -10138445 - AluSp SINE Alu -97 216 137 2326 81 0 39 chr5 192947087 192947396 -10138136 - AluSg SINE Alu -13 297 1 1543 108 9 9 chr5 192947396 192947529 -10138003 - AluSp SINE Alu -175 138 3 1781 243 40 81 chr5 192947600 192948305 -10137227 - LTR41 LTR ERVL -97 676 1 777 235 176 75 chr5 192948464 192948822 -10136710 - MER57B LTR ERV1 -9 394 1 986 251 33 66 chr5 192948822 192949057 -10136475 - MER31-int LTR ERV1 -393 7144 6924 2355 104 0 0 chr5 192949057 192949366 -10136166 + AluSq SINE Alu 5 313 0 986 251 33 66 chr5 192949366 192949493 -10136039 - MER31-int LTR ERV1 -613 6924 6794 2164 85 37 0 chr5 192949821 192950115 -10135417 + AluSx SINE Alu 1 305 -7 710 211 0 8 chr5 192950124 192950247 -10135285 - FLAM_A SINE Alu -8 125 4 2353 112 0 0 chr5 192950402 192950714 -10134818 - AluSx SINE Alu 0 312 1 667 228 21 7 chr5 192951071 192951216 -10134316 - MER31-int LTR ERV1 -1358 6179 6033 476 257 5 126 chr5 192951606 192951828 -10133704 - MER31-int LTR ERV1 -1479 6058 5864 2429 100 0 0 chr5 192951845 192952154 -10133378 - AluSg SINE Alu -1 309 1 1240 274 44 86 chr5 192952174 192952301 -10133231 - MER31-int LTR ERV1 -1716 5821 5690 2252 103 3 13 chr5 192952301 192952613 -10132919 - AluSx SINE Alu -3 309 1 1240 274 44 86 chr5 192952613 192953241 -10132291 - MER31-int LTR ERV1 -1847 5690 5037 2142 92 34 0 chr5 192953241 192953533 -10131999 + AluSq SINE Alu 1 302 -11 1797 153 7 53 chr5 192953541 192953842 -10131690 - AluJb SINE Alu -25 287 1 1240 274 44 86 chr5 192953842 192953962 -10131570 - MER31-int LTR ERV1 -2507 5030 2090 * 1886 194 71 56 chr5 192953956 192954565 -10130967 - MER31-int LTR ERV1 -1696 3240 2623 728 381 12 105 chr5 192954675 192954715 -10130817 - MER31-int LTR ERV1 -2343 2593 2551 1647 172 21 7 chr5 192954715 192955005 -10130527 + AluJo SINE Alu 1 294 -18 728 381 12 105 chr5 192955005 192955363 -10130169 - MER31-int LTR ERV1 -2385 2551 2232 5434 21 2 2 chr5 192955363 192955981 -10129551 + L1PA3 LINE L1 5363 5980 -175 646 143 0 0 chr5 192955981 192956072 -10129460 - AluS SINE Alu -220 92 2 1910 125 30 30 chr5 192956075 192956379 -10129153 - AluSx SINE Alu -5 307 4 629 165 9 9 chr5 192956383 192956492 -10129040 + MER21B LTR ERV1 463 571 -292 1988 147 3 0 chr5 192956492 192956791 -10128741 - AluSx SINE Alu -12 300 1 1352 227 137 16 chr5 192956830 192957217 -10128315 - MER57B LTR ERV1 0 434 1 419 324 13 44 chr5 192957297 192957522 -10128010 + L1MC4a LINE L1 3100 3317 -2829 2044 154 22 25 chr5 192957563 192957797 -10127735 - MLT1A1 LTR MaLR -2 363 129 2552 104 93 36 chr5 192957797 192958218 -10127314 + MER65A LTR ERV1 1 445 0 2044 154 22 25 chr5 192958218 192958347 -10127185 - MLT1A1 LTR MaLR -236 129 1 232 136 23 0 chr5 192958348 192958392 -10127140 + L1P LINE L1 3357 3401 -2745 263 180 0 20 chr5 192958707 192958724 -10126808 + AluSp SINE Alu 120 135 -168 269 171 0 0 chr5 192958724 192958765 -10126767 + Alu SINE Alu 1 41 -262 1478 130 0 0 chr5 192958868 192959083 -10126449 + AluSq SINE Alu 97 311 -2 233 29 29 0 chr5 192959104 192959138 -10126394 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 654 292 93 23 chr5 192959140 192959658 -10125874 + L1MC4a LINE L1 3922 4471 -1675 534 152 0 0 chr5 192959676 192959755 -10125777 + FLAM_A SINE Alu 12 90 -52 2242 116 0 3 chr5 192959935 192960236 -10125296 - AluSq SINE Alu -13 300 1 524 238 74 58 chr5 192960241 192960765 -10124767 + L1MC4a LINE L1 4901 5438 -746 1181 159 5 0 chr5 192960797 192960998 -10124534 + L1MB7 LINE L1 4848 5049 -1097 * 1353 140 51 108 chr5 192960995 192961109 -10124423 + L1MB7 LINE L1 5854 5973 -211 1848 162 6 13 chr5 192961109 192961446 -10124086 + AluSq SINE Alu 1 313 0 1353 140 51 108 chr5 192961446 192961580 -10123952 + L1MB7 LINE L1 5973 6079 -105 2162 115 3 3 chr5 192961580 192961876 -10123656 + AluSx SINE Alu 1 296 -16 1353 140 51 108 chr5 192961876 192961977 -10123555 + L1MB7 LINE L1 6079 6184 0 * 2191 203 101 74 chr5 192961974 192962234 -10123298 + L1MC4a LINE L1 5425 5677 -2131 1760 152 21 3 chr5 192962234 192962523 -10123009 + AluJo SINE Alu 1 294 -18 2191 203 101 74 chr5 192962523 192962910 -10122622 + L1MC4a LINE L1 5677 6095 -1713 2147 120 3 7 chr5 192962910 192963211 -10122321 - AluSx SINE Alu -12 300 1 2191 203 101 74 chr5 192963211 192963288 -10122244 + L1MC4a LINE L1 6095 6169 -1639 1311 302 9 108 chr5 192963293 192963627 -10121905 + AluJb SINE Alu 1 301 -1 1231 267 24 23 chr5 192963628 192964280 -10121252 + L1MC4a LINE L1 7114 7711 -97 2073 102 3 65 chr5 192964313 192964635 -10120897 + AluSx SINE Alu 1 302 -10 331 214 24 24 chr5 192964940 192965024 -10120508 - MLT1H LTR MaLR -374 175 92 478 281 62 56 chr5 192965029 192965370 -10120162 + L1MC4a LINE L1 6209 6551 -1257 2497 82 0 0 chr5 192965898 192966202 -10119330 - AluSx SINE Alu -8 304 1 501 298 52 32 chr5 192966512 192966760 -10118772 + MLT1K LTR MaLR 11 263 -325 2197 82 4 0 chr5 192966816 192967085 -10118447 - AluSx SINE Alu -7 305 36 1543 195 50 0 chr5 192967088 192967245 -10118287 - AluJb SINE Alu -21 291 113 245 27 54 0 chr5 192967245 192967282 -10118250 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1543 195 50 0 chr5 192967282 192967401 -10118131 - AluJb SINE Alu -199 113 1 240 213 123 57 chr5 192967741 192967863 -10117669 + MLT1K LTR MaLR 433 562 -26 2133 126 10 3 chr5 192967955 192968257 -10117275 + AluSx SINE Alu 1 304 -8 934 47 0 0 chr5 192968374 192968480 -10117052 + AluY SINE Alu 195 300 -11 3983 96 11 0 chr5 192968985 192969528 -10116004 + MER41A LTR ERV1 1 549 -5 3113 111 7 0 chr5 192969721 192970152 -10115380 + MER57B LTR ERV1 1 434 0 2163 109 3 0 chr5 192970181 192970466 -10115066 - AluSp SINE Alu -26 287 2 2588 52 0 3 chr5 192970495 192970803 -10114729 + AluY SINE Alu 1 307 -4 1468 296 81 27 chr5 192970831 192971096 -10114436 - MLT1K LTR MaLR 0 588 339 2099 88 3 42 chr5 192971096 192971403 -10114129 + AluSq SINE Alu 1 295 -18 1468 296 81 27 chr5 192971403 192971694 -10113838 - MLT1K LTR MaLR -249 339 2 396 250 40 16 chr5 192971822 192971946 -10113586 - MIR SINE MIR 0 262 136 2279 116 0 0 chr5 192972036 192972337 -10113195 + AluSq SINE Alu 1 301 -12 299 363 96 6 chr5 192972389 192972546 -10112986 - L2 LINE L2 0 3272 3102 25 0 0 0 chr5 192972564 192972589 -10112943 + AT_rich Low_complexity Low_complexity 1 25 0 2331 85 0 10 chr5 192972593 192972887 -10112645 - AluSg SINE Alu -19 291 1 1050 269 43 41 chr5 192973329 192973772 -10111760 - MER113 DNA MER1_type? -77 444 1 2077 104 3 77 chr5 192974093 192974420 -10111112 - AluSq SINE Alu -10 303 1 1364 161 41 0 chr5 192974422 192974640 -10110892 - AluJb SINE Alu -22 290 64 2488 62 7 13 chr5 192974666 192974974 -10110558 - AluY SINE Alu -5 306 1 1718 100 32 16 chr5 192974981 192975230 -10110302 - L1PA10 LINE L1 -11 6157 5905 218 160 20 0 chr5 192975988 192976038 -10109494 + CT-rich Low_complexity Low_complexity 2 52 0 269 216 43 31 chr5 192976106 192976268 -10109264 + (TTGTG)n Simple_repeat Simple_repeat 3 166 0 835 180 53 0 chr5 192976310 192976460 -10109072 - FRAM SINE Alu -6 160 3 384 179 0 0 chr5 192976598 192976682 -10108850 + L1PB4 LINE L1 6073 6156 0 405 102 0 0 chr5 192977036 192977095 -10108437 + (TG)n Simple_repeat Simple_repeat 1 59 0 2394 106 0 0 chr5 192977177 192977489 -10108043 - AluSx SINE Alu 0 312 1 1056 153 17 0 chr5 192977661 192977837 -10107695 - MSTD LTR MaLR 0 396 218 1786 118 14 7 chr5 192977869 192978148 -10107384 + MSTA LTR MaLR 133 413 -15 2225 133 48 24 chr5 192978148 192978344 -10107188 + L1MB3 LINE L1 5761 5951 -232 2361 102 3 0 chr5 192978344 192978648 -10106884 + AluSq SINE Alu 1 305 -8 2225 133 48 24 chr5 192978648 192978864 -10106668 + L1MB3 LINE L1 5951 6183 0 1008 195 104 111 chr5 192979100 192979410 -10106122 - MSTD LTR MaLR -3 393 84 2206 79 3 21 chr5 192979410 192979734 -10105798 - AluSp SINE Alu 0 319 1 1008 195 104 111 chr5 192979734 192979817 -10105715 - MSTD LTR MaLR -312 84 2 332 256 55 61 chr5 192980013 192980177 -10105355 + MER103 DNA DNA 3 165 -1 548 188 20 0 chr5 192980378 192980479 -10105053 + MER58 DNA MER1_type 2318 2420 0 2419 80 0 10 chr5 192980505 192980807 -10104725 - AluSx SINE Alu -13 299 1 389 257 283 27 chr5 192980847 192981034 -10104498 - MIR SINE MIR 0 262 28 269 266 0 0 chr5 192981050 192981114 -10104418 + Charlie7 DNA MER1_type 1 64 -2548 1460 187 7 81 chr5 192981243 192981400 -10104132 - AluJo SINE Alu -17 295 128 2351 116 0 0 chr5 192981400 192981702 -10103830 - AluSx SINE Alu -10 302 1 1460 187 7 81 chr5 192981702 192981766 -10103766 - AluJo SINE Alu -184 128 101 2093 88 74 28 chr5 192981766 192982051 -10103481 - AluSg SINE Alu -12 298 1 1460 187 7 81 chr5 192982051 192982138 -10103394 - AluJo SINE Alu -211 101 9 251 290 0 0 chr5 192982635 192982728 -10102804 + L1MC4 LINE L1 6611 6703 -1339 2220 123 0 10 chr5 192982731 192983031 -10102501 - AluSx SINE Alu -15 297 1 2608 62 0 0 chr5 192983178 192983484 -10102048 - AluY SINE Alu -5 306 1 946 216 48 9 chr5 192983655 192983882 -10101650 - MER46A DNA MER2_type 0 236 1 284 237 9 105 chr5 192984124 192984238 -10101294 - MER103 DNA DNA -5 161 59 432 293 107 18 chr5 192984329 192984555 -10100977 + MIR SINE MIR 12 254 -8 2277 105 3 3 chr5 192984560 192984865 -10100667 + AluSx SINE Alu 1 305 -7 305 306 20 20 chr5 192985000 192985098 -10100434 + MER5A DNA MER1_type 92 189 0 2247 116 20 0 chr5 192985317 192985620 -10099912 + AluSq SINE Alu 1 309 -4 1884 154 6 32 chr5 192985893 192986204 -10099328 - AluJo SINE Alu -4 308 6 2395 78 3 0 chr5 192986584 192986880 -10098652 - AluSx SINE Alu -13 299 3 24 0 0 0 chr5 192987177 192987201 -10098331 + AT_rich Low_complexity Low_complexity 1 24 0 256 291 213 0 chr5 192989095 192989222 -10096310 + MIR SINE MIR 39 192 -70 239 111 0 22 chr5 192990330 192990375 -10095157 + (CAGGG)n Simple_repeat Simple_repeat 3 46 0 353 284 257 11 chr5 192990974 192991157 -10094375 + MIR SINE MIR 21 248 -14 269 368 96 19 chr5 193043103 193043426 -10042106 + L2 LINE L2 2888 3235 -37 1903 264 121 47 chr5 193043494 193044221 -10041311 + MER45C DNA AcHobo 1 781 -172 374 127 14 0 chr5 193044262 193044333 -10041199 + (TG)n Simple_repeat Simple_repeat 2 73 0 1099 190 97 10 chr5 193044408 193044698 -10040834 + MER45B DNA AcHobo 715 1029 -11 2232 105 7 7 chr5 193044903 193045208 -10040324 + AluSq SINE Alu 1 305 -8 3458 108 31 29 chr5 193045213 193045506 -10040026 - L1MA5A LINE L1 -219 6078 5787 2434 105 0 0 chr5 193045506 193045819 -10039713 - AluSq SINE Alu 0 313 1 3458 108 31 29 chr5 193045819 193046109 -10039423 - L1MA5A LINE L1 -510 5787 5494 182 214 24 0 chr5 193046267 193046309 -10039223 + L2 LINE L2 3262 3304 -9 453 188 86 26 chr5 193046312 193046429 -10039103 + L1MC1 LINE L1 6210 6333 0 456 320 64 0 chr5 193046596 193046768 -10038764 - MIR SINE MIR -60 202 20 1201 85 39 0 chr5 193047025 193047178 -10038354 + AluSg/x SINE Alu 136 294 -16 315 240 7 93 chr5 193047389 193047462 -10038070 + L1MC4 LINE L1 6473 6528 -1514 2529 70 0 3 chr5 193047462 193047764 -10037768 + AluY SINE Alu 1 301 -10 315 240 7 93 chr5 193047764 193047840 -10037692 + L1MC4 LINE L1 6528 6609 -1433 778 271 200 33 chr5 193047856 193048394 -10037138 + L1MC4 LINE L1 6717 7366 -676 1010 282 40 21 chr5 193048526 193048852 -10036680 + LTR16B LTR ERVL 133 464 0 489 237 169 6 chr5 193048920 193049089 -10036443 + MIR SINE MIR 49 248 -14 437 258 66 48 chr5 193049143 193049310 -10036222 + MIR SINE MIR 93 262 0 1715 195 21 27 chr5 193049333 193049707 -10035825 - MLT1A2 LTR MaLR 0 374 3 505 247 167 6 chr5 193049790 193049964 -10035568 + MIR SINE MIR 47 248 -14 198 71 0 0 chr5 193050152 193050180 -10035352 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 279 73 0 0 chr5 193050887 193050928 -10034604 - MER85 DNA T2_type -98 41 1 186 327 133 18 chr5 193051864 193051977 -10033555 + MIR SINE MIR 63 188 -74 739 276 131 10 chr5 193051984 193052274 -10033258 + MLT1I LTR MaLR 1 325 -84 200 321 25 0 chr5 193052581 193052662 -10032870 - MIR SINE MIR -21 241 159 312 216 45 0 chr5 193052957 193053045 -10032487 - L1 LINE L1 -2876 3270 3179 1381 157 4 17 chr5 193053048 193053278 -10032254 - AluJb SINE Alu 0 312 86 2221 93 52 0 chr5 193053330 193053619 -10031913 - AluSq SINE Alu -9 304 1 25 31 0 0 chr5 193053637 193053669 -10031863 + AT_rich Low_complexity Low_complexity 1 32 0 845 141 18 6 chr5 193053669 193053832 -10031700 - L1MA5A LINE L1 -5 6292 6128 410 155 0 10 chr5 193055255 193055358 -10030174 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 254 300 0 38 chr5 193055358 193055438 -10030094 + L2 LINE L2 3195 3271 -1 2240 104 4 0 chr5 193056074 193056354 -10029178 + AluSx SINE Alu 1 281 -31 827 196 80 25 chr5 193056493 193056692 -10028840 - MIR SINE MIR -5 257 48 3985 139 34 38 chr5 193056703 193056751 -10028781 - L1MB7 LINE L1 -1 6183 6136 2363 100 0 3 chr5 193056751 193057062 -10028470 + AluSx SINE Alu 1 310 -2 3985 139 34 38 chr5 193057062 193057702 -10027830 - L1MB7 LINE L1 -48 6136 5496 2207 123 3 0 chr5 193057702 193058003 -10027529 - AluSx SINE Alu -10 302 1 3985 139 34 38 chr5 193058003 193058081 -10027451 - L1MB7 LINE L1 -688 5496 5419 302 199 7 53 chr5 193058364 193058515 -10027017 + C-rich Low_complexity Low_complexity 4 147 0 454 241 26 0 chr5 193058648 193058764 -10026768 + MIR SINE MIR 36 154 -108 550 111 0 0 chr5 193058769 193058850 -10026682 - L1MB2 LINE L1 -261 5910 5830 811 255 192 9 chr5 193059778 193060206 -10025326 + LTR33 LTR ERVL 13 518 -3 5100 132 5 42 chr5 193060569 193061273 -10024259 - L1MB3 LINE L1 -2 6181 5453 262 0 53 0 chr5 193061273 193061311 -10024221 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 2147 108 11 0 chr5 193061311 193061590 -10023942 - AluSx SINE Alu -30 282 1 1733 176 3 17 chr5 193061590 193061892 -10023640 - AluJo SINE Alu -14 298 1 5100 132 5 42 chr5 193061892 193062111 -10023421 - L1MB3 LINE L1 -727 5456 5290 1426 157 34 24 chr5 193062401 193062695 -10022837 + MER41B LTR ERV1 339 635 0 1571 172 93 0 chr5 193062938 193063217 -10022315 - AluSx SINE Alu -7 305 1 783 149 12 56 chr5 193063217 193063378 -10022154 - L1M4 LINE L1 -690 5488 5335 320 264 275 0 chr5 193063615 193063808 -10021724 - MIR SINE MIR -5 257 12 541 299 90 0 chr5 193064395 193064572 -10020960 - MIR SINE MIR -19 243 51 447 271 56 21 chr5 193065526 193065670 -10019862 - MIR SINE MIR -45 217 69 2663 65 0 0 chr5 193065677 193065985 -10019547 + AluY SINE Alu 1 308 -3 549 183 25 17 chr5 193066002 193066122 -10019410 + MLT1A2 LTR MaLR 32 152 -213 618 94 0 21 chr5 193066124 193066220 -10019312 + FLAM_A SINE Alu 49 142 0 870 163 96 43 chr5 193066221 193066430 -10019102 + MLT1A2 LTR MaLR 155 374 0 381 291 79 36 chr5 193066603 193066768 -10018764 - MIR SINE MIR -71 191 20 230 213 11 11 chr5 193066886 193066942 -10018590 + MIR SINE MIR 98 151 -111 1966 131 0 14 chr5 193066944 193067234 -10018298 - AluJo SINE Alu -11 301 16 976 110 0 0 chr5 193069211 193069338 -10016194 + FRAM SINE Alu 43 169 -7 2370 101 3 0 chr5 193069339 193069636 -10015896 + AluSx SINE Alu 1 298 -14 451 201 53 15 chr5 193069645 193069788 -10015744 + MIR SINE MIR 9 160 -62 778 264 31 5 chr5 193070175 193070368 -10015164 - MIR SINE MIR -42 220 23 1989 135 45 3 chr5 193071314 193071602 -10013930 + AluJo SINE Alu 1 300 -12 407 295 41 8 chr5 193071678 193071800 -10013732 - MIR SINE MIR -109 153 28 1506 214 64 39 chr5 193071881 193072320 -10013212 + MLT1D LTR MaLR 1 450 -55 803 249 104 15 chr5 193072439 193072640 -10012892 - MIR SINE MIR -31 231 13 316 224 47 118 chr5 193072651 193072746 -10012786 + L1ME LINE L1 5524 5603 -518 2180 140 0 0 chr5 193072746 193073053 -10012479 + AluSx SINE Alu 1 307 -5 316 224 47 118 chr5 193073053 193073127 -10012405 + L1ME LINE L1 5603 5681 -440 290 239 11 33 chr5 193073293 193073385 -10012147 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 186 133 0 0 chr5 193073386 193073416 -10012116 + (CA)n Simple_repeat Simple_repeat 1 30 0 378 309 72 14 chr5 193074262 193074401 -10011131 - MIR SINE MIR -6 256 110 201 318 206 0 chr5 193075228 193075335 -10010197 - L2 LINE L2 -2 3270 3142 373 66 33 0 chr5 193075354 193075415 -10010117 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 910 75 67 0 chr5 193075628 193075748 -10009784 + AluSg/x SINE Alu 170 297 -15 261 0 0 0 chr5 193075748 193075777 -10009755 + (TA)n Simple_repeat Simple_repeat 2 30 0 371 232 21 32 chr5 193075786 193075881 -10009651 + MER96B DNA MER1_type? 324 417 0 529 268 137 0 chr5 193075881 193076034 -10009498 + MIR SINE MIR 89 262 0 2005 110 7 0 chr5 193076640 193076907 -10008625 + AluSx SINE Alu 35 304 -4 201 39 0 0 chr5 193076907 193076933 -10008599 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 325 275 32 104 chr5 193077485 193077736 -10007796 - L1M4 LINE L1 -3238 2908 2676 2620 52 0 7 chr5 193077737 193078047 -10007485 + AluY SINE Alu 2 309 -2 711 322 39 0 chr5 193078117 193078347 -10007185 - MIR SINE MIR -2 260 22 234 303 13 0 chr5 193078746 193078822 -10006710 + MIR SINE MIR 53 129 -133 2364 109 0 0 chr5 193079084 193079397 -10006135 + AluSq SINE Alu 1 313 0 510 252 61 26 chr5 193079397 193079798 -10005734 + MER90 LTR ERV1 5 488 -126 1877 160 13 26 chr5 193080079 193080386 -10005146 + AluSx SINE Alu 1 303 -9 2658 228 103 38 chr5 193080544 193081449 -10004083 + L1MDa LINE L1 27 1112 -5428 1941 141 13 16 chr5 193081449 193081754 -10003778 + AluSx SINE Alu 1 304 -8 2658 228 103 38 chr5 193081754 193082057 -10003475 + L1MDa LINE L1 1112 1394 -5146 797 290 89 30 chr5 193082348 193083025 -10002507 - L2 LINE L2 -50 3263 2550 2158 112 0 40 chr5 193083380 193083701 -10001831 + AluSx SINE Alu 1 308 -4 867 184 58 0 chr5 193083736 193083910 -10001622 - MER63A DNA MER1_type -26 184 1 388 336 73 0 chr5 193084273 193084410 -10001122 - MIR SINE MIR -83 179 33 185 265 255 0 chr5 193084704 193084806 -10000726 + L2 LINE L2 3145 3272 0 349 232 107 0 chr5 193085308 193085420 -10000112 + L2 LINE L2 2629 2752 -562 211 220 20 0 chr5 193085485 193085535 -9999997 + L2 LINE L2 2932 2982 -290 949 254 89 56 chr5 193085561 193085602 -9999930 + L2 LINE L2 2621 2659 -654 2036 125 0 4 chr5 193085602 193085929 -9999603 - AluSc SINE Alu 0 326 1 2321 108 0 3 chr5 193085930 193086235 -9999297 - AluSx SINE Alu -8 304 1 949 254 89 56 chr5 193086235 193086388 -9999144 + L2 LINE L2 2659 2805 -508 853 139 0 29 chr5 193086388 193086525 -9999007 - FLAM_C SINE Alu 0 133 1 949 254 89 56 chr5 193086525 193086567 -9998965 + L2 LINE L2 2805 2844 -469 1424 241 104 28 chr5 193086567 193087040 -9998492 + MLT1J LTR MaLR 1 509 -2 949 254 89 56 chr5 193087040 193087400 -9998132 + L2 LINE L2 2844 3258 -55 800 79 59 13 chr5 193087451 193087904 -9997628 + (TA)n Simple_repeat Simple_repeat 1 473 0 2258 108 0 0 chr5 193087904 193088190 -9997342 - AluSq SINE Alu -25 288 3 272 48 24 0 chr5 193088207 193088249 -9997283 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 426 179 24 24 chr5 193088324 193088408 -9997124 + MER58B DNA MER1_type 258 341 0 2401 102 0 0 chr5 193088486 193088791 -9996741 + AluSg SINE Alu 2 306 -4 34 24 0 0 chr5 193088990 193089031 -9996501 + AT_rich Low_complexity Low_complexity 1 41 0 195 239 403 0 chr5 193089040 193089107 -9996425 + L2 LINE L2 3178 3271 -1 21 36 0 0 chr5 193089167 193089195 -9996337 + AT_rich Low_complexity Low_complexity 1 28 0 303 240 71 55 chr5 193089557 193089740 -9995792 - Charlie7 DNA MER1_type 0 2612 2427 292 229 16 0 chr5 193089895 193089956 -9995576 - Charlie7 DNA MER1_type -2525 87 26 200 308 80 89 chr5 193089985 193090222 -9995310 + L2 LINE L2 2943 3177 -95 524 179 32 0 chr5 193090339 193090434 -9995098 - MER5A DNA MER1_type 0 189 92 1640 123 3 39 chr5 193090434 193090718 -9994814 + MLT1B LTR MaLR 1 274 -116 2208 119 3 13 chr5 193090719 193091022 -9994510 + AluSc SINE Alu 1 300 -9 324 0 0 0 chr5 193091022 193091058 -9994474 + (GA)n Simple_repeat Simple_repeat 1 36 0 505 41 14 14 chr5 193091058 193091131 -9994401 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 644 225 28 0 chr5 193091131 193091273 -9994259 + MLT1B LTR MaLR 245 390 0 449 229 10 10 chr5 193091273 193091369 -9994163 - MER5A DNA MER1_type -93 96 1 675 252 145 9 chr5 193092135 193092453 -9993079 - MLT1K LTR MaLR -6 582 222 345 297 80 40 chr5 193092538 193092713 -9992819 + MIR SINE MIR 59 240 -22 304 318 18 0 chr5 193092933 193093043 -9992489 - L2 LINE L2 -4 3268 3157 301 275 0 44 chr5 193093158 193093249 -9992283 - MIR SINE MIR -63 145 59 417 259 85 3 chr5 193093769 193093925 -9991607 + MIR SINE MIR 23 192 -63 354 285 61 19 chr5 193093923 193094122 -9991410 - MIR SINE MIR -38 224 10 * 355 336 15 29 chr5 193095436 193095573 -9989959 - MIR SINE MIR -79 183 49 241 196 20 0 chr5 193095580 193095631 -9989901 - MER74B LTR ERVL 0 622 571 1630 226 17 67 chr5 193095768 193096245 -9989287 - MER74A LTR ERVL -92 466 14 238 197 49 0 chr5 193096884 193096945 -9988587 - MLT1K LTR MaLR -19 569 506 539 202 18 9 chr5 193097130 193097244 -9988288 - MLT1K LTR MaLR -324 264 150 243 0 0 0 chr5 193097504 193097531 -9988001 + (T)n Simple_repeat Simple_repeat 1 27 0 561 321 24 14 chr5 193097719 193097928 -9987604 + MIR SINE MIR 52 262 0 290 250 98 9 chr5 193097981 193098093 -9987439 - LTR67 LTR ERVL -6 551 430 525 243 18 24 chr5 193098150 193098319 -9987213 - LTR33A LTR ERVL -16 507 340 308 286 61 0 chr5 193098519 193098617 -9986915 - LTR33A LTR ERVL -361 162 59 510 299 25 44 chr5 193099287 193099491 -9986041 - MIR SINE MIR -37 225 26 373 307 124 7 chr5 193100781 193100918 -9984614 - MIR SINE MIR -14 248 96 2259 102 3 13 chr5 193100949 193101263 -9984269 - AluSx SINE Alu -1 311 1 386 277 202 24 chr5 193101448 193101661 -9983871 - MIR SINE MIR -5 257 7 361 156 0 39 chr5 193101860 193101937 -9983595 + MLT1K LTR MaLR 189 262 -326 229 146 0 0 chr5 193102476 193102531 -9983001 - L1M LINE L1 -836 5344 5290 1587 152 20 20 chr5 193102920 193103217 -9982315 + MER41B LTR ERV1 339 635 0 378 340 59 59 chr5 193103248 193103551 -9981981 + L2 LINE L2 2969 3271 -1 2281 86 20 7 chr5 193104545 193104837 -9980695 + AluSc SINE Alu 1 296 -13 392 267 129 58 chr5 193104887 193105112 -9980420 - MIR SINE MIR -2 260 20 784 254 168 48 chr5 193105206 193105459 -9980073 + L2 LINE L2 2655 2876 -396 2323 104 10 0 chr5 193105459 193105757 -9979775 - AluSx SINE Alu -11 301 1 784 254 168 48 chr5 193105757 193106068 -9979464 + L2 LINE L2 2876 3272 0 227 250 39 0 chr5 193106108 193106160 -9979372 + L2 LINE L2 3219 3272 0 1533 60 0 0 chr5 193106372 193106557 -9978975 + AluY SINE Alu 122 306 -5 1274 253 53 67 chr5 193106842 193107454 -9978078 - L2 LINE L2 -10 3303 2684 671 256 169 8 chr5 193107522 193107788 -9977744 + MLT1I LTR MaLR 99 407 -2 415 259 19 0 chr5 193107788 193107896 -9977636 - L2 LINE L2 -655 2659 2550 1453 230 6 23 chr5 193107897 193108245 -9977287 - L1MEc LINE L1 -5590 806 465 823 177 0 0 chr5 193108902 193109032 -9976500 - FLAM_C SINE Alu -1 132 3 871 189 102 29 chr5 193109064 193109270 -9976262 - MIR SINE MIR -22 240 20 311 233 273 55 chr5 193109350 193109594 -9975938 - L2 LINE L2 -267 3046 2740 2334 111 0 3 chr5 193109594 193109901 -9975631 - AluSx SINE Alu -6 306 1 311 233 273 55 chr5 193109901 193109939 -9975593 - L2 LINE L2 -573 2740 2712 906 162 12 12 chr5 193111050 193111236 -9974296 - L1MC/D LINE L1 -647 5595 5433 * 2531 184 39 7 chr5 193111221 193111859 -9973673 - L1M4 LINE L1 -370 5804 5146 1371 273 60 30 chr5 193112617 193113188 -9972344 + L1ME4a LINE L1 5483 6070 -51 788 211 16 46 chr5 193113245 193113439 -9972093 - MER20 DNA MER1_type -31 188 1 570 266 70 58 chr5 193113961 193114018 -9971514 - MIR SINE MIR 0 262 207 2430 94 0 0 chr5 193114018 193114317 -9971215 - AluSg SINE Alu -11 299 1 570 266 70 58 chr5 193114317 193114518 -9971014 - MIR SINE MIR -55 207 1 428 178 33 33 chr5 193114649 193114739 -9970793 - MIR SINE MIR -56 206 117 212 305 0 0 chr5 193115402 193115461 -9970071 + GA-rich Low_complexity Low_complexity 3 61 0 2350 51 41 3 chr5 193115498 193115791 -9969741 + AluY SINE Alu 1 304 -7 703 160 187 18 chr5 193116579 193116804 -9968728 - L1ME3A LINE L1 -219 5951 5689 638 278 198 27 chr5 193116810 193117295 -9968237 - L1MEd LINE L1 -3783 2450 1905 1324 176 139 15 chr5 193117397 193117727 -9967805 - L1MB7 LINE L1 0 6184 5814 12025 182 39 52 chr5 193117735 193121137 -9964395 - L1MC1 LINE L1 -6 6607 3164 1643 166 14 7 chr5 193121137 193121415 -9964117 + AluJb SINE Alu 1 280 -32 12025 182 39 52 chr5 193121415 193124000 -9961532 - L1MC1 LINE L1 -3449 3164 548 306 0 0 0 chr5 193124000 193124034 -9961498 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1945 115 4 0 chr5 193124034 193124304 -9961228 - AluSq SINE Alu -42 271 1 12025 182 39 52 chr5 193124304 193124532 -9961000 - L1MC1 LINE L1 -6064 549 320 2142 137 9 9 chr5 193124532 193124869 -9960663 - MER1B DNA MER1_type 0 337 1 12025 182 39 52 chr5 193124869 193125325 -9960207 - L1MC1 LINE L1 -6293 320 20 3083 156 35 0 chr5 193125327 193126021 -9959511 - L1MB7 LINE L1 -357 5827 5107 695 263 150 25 chr5 193126019 193126873 -9958659 - L1MEd LINE L1 -4616 1780 792 * 365 292 12 87 chr5 193127412 193127453 -9958079 - MIR SINE MIR -60 202 160 1317 184 57 86 chr5 193127453 193127909 -9957623 + LTR56 LTR ERV1 1 443 -2 365 292 12 87 chr5 193127909 193128028 -9957504 - MIR SINE MIR -102 160 54 250 209 0 0 chr5 193128482 193128525 -9957007 - MIR SINE MIR -3 259 217 228 86 0 0 chr5 193128542 193128577 -9956955 + (CA)n Simple_repeat Simple_repeat 2 36 0 230 218 256 0 chr5 193128610 193128688 -9956844 + MIR SINE MIR 71 168 -94 256 300 22 11 chr5 193128715 193128805 -9956727 - MIR SINE MIR -98 164 74 253 330 195 15 chr5 193128804 193129071 -9956461 - L2 LINE L2 -12 3260 2946 * 248 181 374 36 chr5 193129467 193129550 -9955982 + L2 LINE L2 3200 3310 -3 3546 182 89 31 chr5 193129585 193129857 -9955675 - L1ME1 LINE L1 -4 6162 5907 1947 145 0 16 chr5 193129857 193130174 -9955358 - AluSx SINE Alu 0 312 1 3546 182 89 31 chr5 193130174 193130836 -9954696 - L1ME1 LINE L1 -259 5907 5175 1369 143 136 0 chr5 193130858 193131109 -9954423 - AluJb SINE Alu -7 305 21 3953 205 32 32 chr5 193131111 193131459 -9954073 - L1ME1 LINE L1 -956 5190 4843 2095 129 3 0 chr5 193131459 193131768 -9953764 + AluSx SINE Alu 1 310 -2 3953 205 32 32 chr5 193131768 193132450 -9953082 - L1ME1 LINE L1 -1302 4844 4160 521 266 70 0 chr5 193132465 193132623 -9952909 + MIR SINE MIR 5 173 -89 1421 155 25 12 chr5 193132757 193133002 -9952530 + MLT1A1 LTR MaLR 1 248 -117 251 250 40 0 chr5 193133074 193133150 -9952382 + L1ME LINE L1 5570 5648 -473 374 261 43 17 chr5 193133153 193133268 -9952264 - MIR SINE MIR -78 184 67 854 104 3 2 chr5 193133269 193133395 -9952137 + MLT1A1 LTR MaLR 254 365 0 460 108 0 0 chr5 193133433 193133507 -9952025 + L1MA8 LINE L1 6214 6287 -4 592 223 175 0 chr5 193133728 193133894 -9951638 - MIR SINE MIR -11 251 57 303 309 0 0 chr5 193134080 193134161 -9951371 + MIR SINE MIR 112 192 -70 297 347 26 19 chr5 193134411 193134583 -9950949 + MIR SINE MIR 23 149 -59 548 325 133 12 chr5 193134780 193135112 -9950420 + MLT1I LTR MaLR 38 409 0 262 290 19 47 chr5 193135116 193135223 -9950309 + MIR SINE MIR 159 262 0 258 239 101 73 chr5 193135226 193135335 -9950197 + MIR SINE MIR 14 125 -137 1131 197 12 49 chr5 193135384 193135628 -9949904 + MIR SINE MIR 28 262 0 608 286 73 26 chr5 193135637 193135871 -9949661 + MIR SINE MIR 1 245 -17 979 133 6 0 chr5 193136805 193136971 -9948561 - L1MA4 LINE L1 -4 6296 6130 1263 197 56 64 chr5 193137043 193137434 -9948098 - MLT1B LTR MaLR 0 390 3 442 293 91 41 chr5 193137633 193137875 -9947657 + MIR SINE MIR 8 261 -1 195 42 0 0 chr5 193138039 193138063 -9947469 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 498 225 8 33 chr5 193139033 193139153 -9946379 + MIR SINE MIR 117 233 -29 1219 272 93 14 chr5 193139391 193139960 -9945572 - L2 LINE L2 0 3313 2700 1427 213 181 21 chr5 193139960 193140392 -9945140 + MLT1D LTR MaLR 5 505 0 900 291 132 24 chr5 193140392 193140818 -9944714 - L2 LINE L2 -618 2696 2225 392 275 39 51 chr5 193140915 193141093 -9944439 - MIR SINE MIR -40 222 47 348 175 63 0 chr5 193141414 193141499 -9944033 - MIR SINE MIR -86 122 31 592 221 37 58 chr5 193141912 193142094 -9943438 + MIR SINE MIR 15 194 -68 1047 190 6 0 chr5 193142094 193142268 -9943264 - FAM SINE Alu 0 175 1 1717 154 3 36 chr5 193142278 193142584 -9942948 - AluJo SINE Alu -16 296 1 259 246 51 34 chr5 193142592 193142710 -9942822 - L1MC5 LINE L1 -36 7925 7806 3609 114 6 37 chr5 193142745 193143291 -9942241 + MER1A DNA MER1_type 1 529 0 517 271 46 13 chr5 193143401 193143552 -9941980 - MIR SINE MIR -87 175 20 261 0 0 0 chr5 193143684 193143713 -9941819 + (CAT)n Simple_repeat Simple_repeat 2 30 0 355 269 90 0 chr5 193143988 193144122 -9941410 - L2 LINE L2 -460 2854 2709 408 250 70 47 chr5 193144425 193144681 -9940851 + L2 LINE L2 2815 3076 -196 1493 241 175 11 chr5 193144681 193144826 -9940706 - MLT1L LTR MaLR 0 615 495 2070 113 3 3 chr5 193144826 193145128 -9940404 - AluSx SINE Alu -10 302 1 1493 241 175 11 chr5 193145128 193145484 -9940048 - MLT1L LTR MaLR -120 495 22 1194 255 117 45 chr5 193145484 193145990 -9939542 + MLT1F LTR MaLR 1 542 0 1493 241 175 11 chr5 193145990 193146013 -9939519 - MLT1L LTR MaLR -593 22 4 417 251 0 20 chr5 193146159 193146411 -9939121 + (TG)n Simple_repeat Simple_repeat 1 246 0 544 211 0 27 chr5 193146422 193146881 -9938651 + (TG)n Simple_repeat Simple_repeat 1 446 0 202 317 114 41 chr5 193146922 193147045 -9938487 + L2 LINE L2 3141 3272 0 201 256 0 0 chr5 193147334 193147377 -9938155 - L2 LINE L2 -20 3252 3210 354 224 178 37 chr5 193147390 193147497 -9938035 + L2 LINE L2 3151 3272 0 315 273 0 0 chr5 193147607 193147684 -9937848 - L2 LINE L2 -285 2987 2911 481 246 124 15 chr5 193147808 193147977 -9937555 + MIR SINE MIR 15 198 -62 334 228 109 11 chr5 193148555 193148647 -9936885 - MIR3 SINE MIR -6 202 102 48 18 0 0 chr5 193148732 193148787 -9936745 + AT_rich Low_complexity Low_complexity 1 55 0 414 309 103 6 chr5 193148802 193148967 -9936565 + L1MC4a LINE L1 5765 5945 -1863 314 216 0 27 chr5 193149786 193149860 -9935672 - L1ME4a LINE L1 -97 6024 5953 2420 109 119 8 chr5 193150821 193151206 -9934326 - MSTA LTR MaLR 0 428 1 2173 106 3 0 chr5 193151810 193152122 -9933410 + AluSq SINE Alu 1 313 0 353 261 108 9 chr5 193152180 193152291 -9933241 - MIR3 SINE MIR -54 154 33 477 270 81 11 chr5 193152579 193152753 -9932779 + MIR SINE MIR 66 251 -11 301 289 33 11 chr5 193153418 193153508 -9932024 - MIR SINE MIR -113 149 58 411 248 91 100 chr5 193153542 193153752 -9931780 - L2 LINE L2 -16 3297 3090 919 221 76 3 chr5 193153872 193154162 -9931370 - L2 LINE L2 -225 3088 2782 201 256 78 44 chr5 193154268 193154358 -9931174 + L3 LINE CR1 1178 1270 -307 2093 105 0 29 chr5 193154388 193154701 -9930831 - AluSx SINE Alu -8 304 1 303 225 58 42 chr5 193154773 193154893 -9930639 - MIR SINE MIR -80 182 61 405 0 0 0 chr5 193155150 193155195 -9930337 + (CA)n Simple_repeat Simple_repeat 2 46 0 467 270 88 14 chr5 193156235 193156450 -9929082 + MIR SINE MIR 2 232 -30 386 114 143 0 chr5 193156506 193156576 -9928956 - MER116 DNA Mariner 0 80 1 500 267 7 40 chr5 193156674 193156824 -9928708 - MIR SINE MIR -116 146 2 325 331 32 24 chr5 193157552 193157676 -9927856 - MIR SINE MIR -47 215 91 441 307 63 13 chr5 193157802 193158040 -9927492 - L1ME4a LINE L1 -196 5925 5676 728 213 185 5 chr5 193158199 193158410 -9927122 - MIR SINE MIR 0 262 14 1828 211 69 13 chr5 193158414 193158892 -9926640 - Charlie4a DNA MER1_type -1 507 3 180 342 61 18 chr5 193159029 193159143 -9926389 + L2 LINE L2 3153 3271 -1 354 227 27 0 chr5 193159401 193159476 -9926056 + MIR SINE MIR 85 161 -101 331 261 58 22 chr5 193159775 193159913 -9925619 + LTR67 LTR ERVL 414 556 -1 281 231 132 11 chr5 193159915 193160006 -9925526 + MIR SINE MIR 158 259 -3 1766 134 0 4 chr5 193160711 193160980 -9924552 - AluJo SINE Alu -44 268 1 556 201 208 7 chr5 193161033 193161187 -9924345 + MER53 DNA DNA 5 189 0 206 241 205 0 chr5 193161696 193161772 -9923760 - MIR SINE MIR -89 119 28 201 245 0 0 chr5 193162638 193162687 -9922845 + A-rich Low_complexity Low_complexity 5 53 0 311 315 18 9 chr5 193162833 193162944 -9922588 - L1MC/D LINE L1 -1993 5815 5704 836 190 81 0 chr5 193162988 193163161 -9922371 - MIR SINE MIR -57 205 14 702 115 0 10 chr5 193163824 193163928 -9921604 - AluSg/x SINE Alu -16 294 192 224 158 0 0 chr5 193163963 193164001 -9921531 - MIR SINE MIR -94 168 131 200 344 201 7 chr5 193164163 193164317 -9921215 - MIR SINE MIR -77 185 2 209 309 15 0 chr5 193164734 193164802 -9920730 - MIR SINE MIR -59 149 81 243 310 35 9 chr5 193164861 193164974 -9920558 + MIR SINE MIR 57 172 -90 527 300 100 16 chr5 193164974 193165224 -9920308 + L1ME LINE L1 5255 5525 -641 836 162 5 27 chr5 193165522 193165707 -9919825 + L1MB8 LINE L1 5998 6178 0 946 157 65 22 chr5 193166851 193167036 -9918496 + MER20 DNA MER1_type 27 219 0 206 270 70 0 chr5 193167057 193167121 -9918411 - MIR SINE MIR -68 140 72 198 257 297 0 chr5 193167610 193167711 -9917821 - MIR SINE MIR -91 171 41 308 283 66 9 chr5 193167945 193168051 -9917481 + MIR SINE MIR 34 145 -63 182 333 56 0 chr5 193169025 193169097 -9916435 + MIR3 SINE MIR 112 187 -21 376 327 10 20 chr5 193169447 193169646 -9915886 + G-rich Low_complexity Low_complexity 1 197 0 1411 232 24 15 chr5 193171114 193171505 -9914027 - MLT1C LTR MaLR 0 467 79 2305 96 0 0 chr5 193171530 193171842 -9913690 - AluSx SINE Alu 0 312 1 439 204 17 7 chr5 193172026 193172147 -9913385 - MIR SINE MIR -43 165 41 198 325 26 0 chr5 193172438 193172515 -9913017 - L2 LINE L2 -535 2779 2701 2066 135 3 0 chr5 193172516 193172827 -9912705 - AluSx SINE Alu 0 312 1 1009 278 178 6 chr5 193172853 193173320 -9912212 + L1MC4 LINE L1 7496 8042 0 306 301 44 20 chr5 193173321 193173524 -9912008 - L2 LINE L2 -613 2701 2494 1769 111 28 35 chr5 193173526 193173815 -9911717 + L1MA1 LINE L1 6006 6292 -10 794 267 20 0 chr5 193174121 193174316 -9911216 - MIR SINE MIR -13 249 51 325 326 114 21 chr5 193174734 193174927 -9910605 - MIR SINE MIR -3 259 49 255 284 30 0 chr5 193175454 193175521 -9910011 - MLT1J2 LTR MaLR -3 447 379 2324 79 7 0 chr5 193175611 193175915 -9909617 + AluSc SINE Alu 1 306 -3 499 298 98 34 chr5 193176064 193176359 -9909173 - MLT1J2 LTR MaLR -71 379 66 444 235 39 0 chr5 193176752 193176854 -9908678 + L1MD1 LINE L1 6118 6223 -19 2034 111 0 7 chr5 193176878 193177159 -9908373 + AluSg SINE Alu 1 281 -29 198 0 0 0 chr5 193177159 193177181 -9908351 + (CA)n Simple_repeat Simple_repeat 1 22 0 213 338 90 0 chr5 193177668 193177801 -9907731 + L2 LINE L2 3166 3310 -3 180 97 0 0 chr5 193177813 193177844 -9907688 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 584 299 33 14 chr5 193178023 193178237 -9907295 + MIR SINE MIR 2 219 -43 216 223 126 19 chr5 193178551 193178654 -9906878 - MIR SINE MIR -12 250 137 278 338 66 35 chr5 193178727 193178842 -9906690 - L1MC4a LINE L1 -1757 6051 5941 1891 164 0 0 chr5 193178842 193179135 -9906397 + AluJo SINE Alu 1 293 -19 278 338 66 35 chr5 193179135 193179247 -9906285 - L1MC4a LINE L1 -1867 5941 5817 343 299 36 15 chr5 193179266 193179403 -9906129 - MIR3 SINE MIR -66 142 3 1568 174 10 31 chr5 193179427 193179715 -9905817 - AluJo SINE Alu -30 282 1 478 237 26 0 chr5 193179923 193180037 -9905495 + MIR SINE MIR 33 149 -113 1596 183 7 20 chr5 193180041 193180342 -9905190 - MLT2C1 LTR ERVL 0 397 101 498 171 0 12 chr5 193180342 193180424 -9905108 - FRAM SINE Alu -37 139 59 269 182 121 0 chr5 193180424 193180490 -9905042 - MLT2C1 LTR ERVL -390 74 1 27 0 0 0 chr5 193180874 193180901 -9904631 + AT_rich Low_complexity Low_complexity 1 27 0 1967 112 14 10 chr5 193180909 193181203 -9904329 + AluY SINE Alu 5 299 -12 281 278 243 23 chr5 193181425 193181598 -9903934 - MIR SINE MIR -21 241 31 184 329 89 0 chr5 193181804 193181883 -9903649 - MIR SINE MIR -60 202 117 299 238 12 25 chr5 193181955 193182035 -9903497 - MLT1L LTR MaLR -536 79 1 207 279 59 0 chr5 193182037 193182105 -9903427 - MIR SINE MIR -141 121 50 277 309 11 0 chr5 193182797 193182891 -9902641 + MIR SINE MIR 61 155 -107 * 379 226 65 71 chr5 193182887 193182962 -9902570 - MIR SINE MIR -59 203 129 2808 91 8 0 chr5 193182962 193183323 -9902209 - THE1B LTR MaLR 0 364 1 379 226 65 71 chr5 193183323 193183402 -9902130 - MIR SINE MIR -133 129 50 308 274 95 0 chr5 193183515 193183610 -9901922 + MIR SINE MIR 93 196 -66 449 231 12 31 chr5 193183664 193183824 -9901708 + MER113 DNA MER1_type? 73 229 -292 263 391 85 0 chr5 193184594 193184875 -9900657 + L2 LINE L2 2950 3254 -18 2148 109 0 22 chr5 193184988 193185308 -9900224 - AluSq SINE Alu 0 313 1 282 311 30 41 chr5 193185356 193185538 -9899994 - MIR SINE MIR -56 206 30 463 121 15 0 chr5 193185544 193185610 -9899922 - FRAM/FAM SINE Alu -99 86 20 254 114 0 0 chr5 193185863 193185907 -9899625 + tRNA-Cys-TGC tRNA tRNA 1 44 -31 594 303 34 19 chr5 193186266 193186474 -9899058 - MIR SINE MIR -32 230 20 2071 109 30 3 chr5 193186483 193186818 -9898714 - AluSx SINE Alu 0 343 1 238 133 183 33 chr5 193186949 193187009 -9898523 - L1MD2 LINE L1 -248 6111 6043 535 309 52 57 chr5 193187318 193187687 -9897845 - L2 LINE L2 -20 3252 2886 183 305 51 0 chr5 193187753 193187812 -9897720 + L2 LINE L2 3252 3313 0 198 333 45 9 chr5 193188236 193188347 -9897185 + MIR SINE MIR 20 134 -128 358 283 44 0 chr5 193189182 193189295 -9896237 + MIR3 SINE MIR 45 162 -46 330 225 0 50 chr5 193189700 193189780 -9895752 + MIR3 SINE MIR 84 159 -49 1446 186 25 18 chr5 193190051 193190350 -9895182 + AluJo SINE Alu 1 301 0 624 222 94 34 chr5 193190422 193190688 -9894844 + MER113 DNA MER1_type? 33 314 -207 2085 126 0 3 chr5 193190691 193190992 -9894540 + AluSx SINE Alu 2 301 -11 1558 136 0 4 chr5 193191500 193191743 -9893789 - L1MA4A LINE L1 0 6303 6062 249 241 80 9 chr5 193192298 193192410 -9893122 - L1ME4a LINE L1 -1 6120 6001 1938 146 29 37 chr5 193192425 193192774 -9892758 - MER7A DNA MER2_type -2 344 1 1748 136 39 14 chr5 193192849 193193135 -9892397 - AluSq SINE Alu -20 293 1 3044 192 70 27 chr5 193193135 193193580 -9891952 - MER82 DNA MER2_type -1 652 171 2016 102 13 42 chr5 193193580 193193893 -9891639 - AluSx SINE Alu -8 304 1 3044 192 70 27 chr5 193193893 193194072 -9891460 - MER82 DNA MER2_type -482 171 1 236 203 0 47 chr5 193194523 193194587 -9890945 - MLT1K LTR MaLR -343 245 185 2225 108 0 0 chr5 193194610 193194917 -9890615 + AluSx SINE Alu 3 309 -3 577 294 33 19 chr5 193195602 193195816 -9889716 - MIR SINE MIR -14 248 32 218 247 108 32 chr5 193195951 193196044 -9889488 + MIR SINE MIR 47 146 -116 362 298 4 118 chr5 193196653 193196898 -9888634 - L2 LINE L2 -47 3225 3009 365 275 80 0 chr5 193196902 193197040 -9888492 - L1MC5 LINE L1 -519 7442 7294 * 459 309 127 12 chr5 193197018 193197277 -9888255 - L1MC4 LINE L1 -556 7486 7198 * 1040 249 60 7 chr5 193197267 193197587 -9887945 - L1MC/D LINE L1 -668 5574 5239 2291 81 0 3 chr5 193197699 193197995 -9887537 + AluSg1 SINE Alu 1 295 -14 2053 161 119 7 chr5 193197995 193198124 -9887408 - L1MB3 LINE L1 -6 6177 6064 1690 178 3 20 chr5 193198124 193198428 -9887104 + AluJo SINE Alu 1 299 -13 2053 161 119 7 chr5 193198428 193198725 -9886807 - L1MB3 LINE L1 -119 6064 5699 535 203 124 45 chr5 193198802 193198979 -9886553 - MLT1K LTR MaLR -7 581 391 292 277 117 48 chr5 193199046 193199277 -9886255 - MLT1K LTR MaLR -302 286 2 235 365 0 0 chr5 193199830 193199937 -9885595 + MIR3 SINE MIR 89 195 -13 600 292 88 59 chr5 193199943 193200563 -9884969 + L2 LINE L2 2616 3272 0 191 315 169 8 chr5 193200896 193201026 -9884506 - MIR SINE MIR -14 248 98 770 226 133 133 chr5 193201517 193201833 -9883699 - MLT1K LTR MaLR -1 587 269 1965 122 30 0 chr5 193201833 193202129 -9883403 + AluSx SINE Alu 1 305 -7 770 226 133 133 chr5 193202129 193202211 -9883321 - MLT1K LTR MaLR -318 270 189 201 229 129 0 chr5 193202763 193202833 -9882699 - MIR SINE MIR -97 165 87 375 258 129 16 chr5 193203061 193203216 -9882316 - MIR SINE MIR -63 145 18 2301 88 0 0 chr5 193203481 193203776 -9881756 + AluSq SINE Alu 1 295 -18 373 325 103 26 chr5 193204090 193204361 -9881171 + L2 LINE L2 2967 3258 -14 195 42 0 0 chr5 193204362 193204386 -9881146 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 588 281 62 42 chr5 193204708 193204968 -9880564 - MLT1K LTR MaLR -4 584 320 381 331 51 6 chr5 193206559 193206737 -9878795 + MIR SINE MIR 2 187 -75 187 381 10 0 chr5 193206793 193206890 -9878642 - MIR SINE MIR -159 103 6 413 246 106 21 chr5 193207327 193207469 -9878063 + MIR SINE MIR 2 155 -107 640 313 107 0 chr5 193207470 193207703 -9877829 - MIR SINE MIR -3 259 2 1039 218 36 0 chr5 193207863 193208088 -9877444 + L1MB7 LINE L1 5933 6165 -19 276 322 11 11 chr5 193208215 193208305 -9877227 + MIR SINE MIR 2 91 -171 881 253 167 15 chr5 193208305 193208629 -9876903 - MLT1K LTR MaLR 0 588 216 1856 177 0 0 chr5 193208871 193209181 -9876351 + AluJo SINE Alu 3 312 0 24 0 0 0 chr5 193209223 193209247 -9876285 + AT_rich Low_complexity Low_complexity 1 24 0 2259 71 10 3 chr5 193209252 193209547 -9875985 + AluSq SINE Alu 1 297 -16 1910 127 0 3 chr5 193209550 193209833 -9875699 - AluJo SINE Alu -30 282 1 257 293 28 19 chr5 193209975 193210081 -9875451 + MIR SINE MIR 21 127 -135 464 312 185 5 chr5 193210250 193210439 -9875093 - MIR SINE MIR -31 231 9 460 314 97 28 chr5 193210770 193211018 -9874514 - L2 LINE L2 -94 3178 2914 2161 100 40 0 chr5 193211392 193211692 -9873840 - AluSx SINE Alu 0 312 1 234 174 0 0 chr5 193212309 193212355 -9873177 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 1074 95 14 0 chr5 193213657 193213804 -9871728 + AluSg/x SINE Alu 137 285 -27 812 183 55 6 chr5 193213880 193214044 -9871488 - MER5A DNA MER1_type 0 189 18 225 0 0 0 chr5 193214044 193214069 -9871463 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 253 91 38 chr5 193214131 193214208 -9871324 - L1ME4a LINE L1 -196 5925 5854 1847 157 0 35 chr5 193214208 193214527 -9871005 - AluSx SINE Alu -4 308 1 312 253 91 38 chr5 193214527 193214635 -9870897 - L1ME4a LINE L1 -267 5854 5730 206 281 16 16 chr5 193215010 193215074 -9870458 - L2 LINE L2 -9 3263 3200 2195 94 7 3 chr5 193215323 193215631 -9869901 - AluSc SINE Alu 0 309 1 2386 143 36 25 chr5 193215824 193216263 -9869269 - L1MB3 LINE L1 -4 6179 5736 457 331 38 5 chr5 193217574 193217781 -9867751 + MIR SINE MIR 39 257 -5 471 199 146 81 chr5 193217863 193218106 -9867426 - MER113 DNA MER1_type? -75 446 176 1922 142 10 0 chr5 193218106 193218401 -9867131 - AluJb SINE Alu 0 312 15 471 199 146 81 chr5 193218401 193218478 -9867054 - MER113 DNA MER1_type? -345 176 105 249 154 0 0 chr5 193218485 193218524 -9867008 + tRNA-Met-e tRNA tRNA 6 44 -31 240 196 131 28 chr5 193218524 193218631 -9866901 - MER113 DNA MER1_type? -402 119 2 712 264 123 38 chr5 193219243 193219667 -9865865 - L1M4 LINE L1 -951 5195 4736 2328 126 0 0 chr5 193220532 193220841 -9864691 - AluSg SINE Alu -1 309 1 216 271 0 0 chr5 193220945 193220993 -9864539 + MIR SINE MIR 105 152 -110 1178 173 62 36 chr5 193221004 193221229 -9864303 + AluJb SINE Alu 69 299 -13 901 121 0 8 chr5 193221379 193221503 -9864029 - FLAM_C SINE Alu -18 125 3 1365 217 8 19 chr5 193221515 193221883 -9863649 - L1MB7 LINE L1 -9 6175 5812 742 199 7 7 chr5 193221883 193222029 -9863503 - FRAM SINE Alu -24 152 7 1946 205 75 23 chr5 193222043 193222303 -9863229 - L1MB7 LINE L1 -365 5819 5574 414 0 0 0 chr5 193222303 193222349 -9863183 + (TG)n Simple_repeat Simple_repeat 1 46 0 2315 75 4 0 chr5 193222349 193222628 -9862904 - AluSp SINE Alu -33 280 1 1946 205 75 23 chr5 193222628 193222951 -9862581 - L1MB7 LINE L1 -610 5574 5269 2041 141 3 26 chr5 193222951 193223257 -9862275 - AluSx SINE Alu -13 299 1 1946 205 75 23 chr5 193223257 193223511 -9862021 - L1MB7 LINE L1 -915 5269 4945 1612 159 84 21 chr5 193223557 193223933 -9861599 + MLT1B LTR MaLR 1 390 0 2244 102 0 40 chr5 193223977 193224301 -9861231 + AluSx SINE Alu 1 311 -1 3360 210 36 12 chr5 193224302 193225125 -9860407 - L1MB7 LINE L1 -1243 4903 4061 247 233 44 78 chr5 193225350 193225437 -9860095 + L1ME4a LINE L1 5748 5836 -285 2172 122 3 3 chr5 193225437 193225732 -9859800 - AluSx SINE Alu -17 295 1 247 233 44 78 chr5 193225732 193225850 -9859682 + L1ME4a LINE L1 5836 5946 -175 190 244 24 98 chr5 193226398 193226480 -9859052 + L3 LINE CR1 1492 1567 -10 1926 124 0 80 chr5 193227562 193227876 -9857656 + AluSx SINE Alu 5 293 -19 2253 118 20 0 chr5 193228152 193228448 -9857084 + AluSq SINE Alu 1 302 -11 4238 105 22 29 chr5 193228476 193229169 -9856363 + MER11C LTR ERVK 384 1071 0 491 46 0 15 chr5 193229169 193229234 -9856298 + HERVK11 LTR ERVK 1 64 -7889 * 13269 59 8 0 chr5 193229229 193230929 -9854603 + HERVK11 LTR ERVK 2888 4601 -3352 9067 55 6 0 chr5 193230927 193232111 -9853421 + HERVK11 LTR ERVK 5525 6767 -1186 * 8124 47 1 0 chr5 193232096 193233092 -9852440 + HERVK11 LTR ERVK 6957 7953 0 * 6462 113 25 27 chr5 193233092 193234165 -9851367 + MER11C LTR ERVK 1 1071 0 296 234 65 0 chr5 193234171 193234248 -9851284 + MIR SINE MIR 88 169 -93 2436 81 0 3 chr5 193235455 193235751 -9849781 - AluSq SINE Alu -18 295 1 180 302 16 0 chr5 193235752 193235815 -9849717 - L2 LINE L2 -601 2713 2650 478 345 71 0 chr5 193235870 193236096 -9849436 + MIR SINE MIR 21 262 0 319 230 52 48 chr5 193236167 193236292 -9849240 + MIR SINE MIR 40 163 -62 226 296 185 0 chr5 193236932 193237040 -9848492 - MER5A DNA MER1_type -7 182 55 180 356 68 68 chr5 193237165 193237356 -9848176 - L2 LINE L2 0 3272 3082 360 351 43 16 chr5 193237374 193237394 -9848138 + MIR SINE MIR 67 85 -177 3468 51 23 0 chr5 193237394 193237828 -9847704 + MLT2A1 LTR ERVL 1 444 0 360 351 43 16 chr5 193237828 193237995 -9847537 + MIR SINE MIR 85 259 -3 2118 72 79 0 chr5 193238010 193238288 -9847244 - AluSc SINE Alu -9 300 1 312 232 168 0 chr5 193238528 193238623 -9846909 + MIR SINE MIR 13 123 -139 483 264 179 18 chr5 193238727 193239000 -9846532 - L2 LINE L2 -2 3311 2995 281 333 0 0 chr5 193239856 193239946 -9845586 - MIR SINE MIR -14 248 159 209 307 99 0 chr5 193240049 193240150 -9845382 - L2 LINE L2 -268 3045 2935 240 165 291 13 chr5 193240176 193240255 -9845277 - MIR SINE MIR -81 181 81 184 274 0 0 chr5 193240922 193240973 -9844559 + MIR SINE MIR 110 160 -102 704 307 45 21 chr5 193241493 193241825 -9843707 - L1ME3 LINE L1 -4 6158 5819 1489 87 0 0 chr5 193241825 193242010 -9843522 - AluSg/x SINE Alu -12 298 114 1198 135 0 6 chr5 193242010 193242180 -9843352 - AluSx SINE Alu -143 169 1 1527 205 117 41 chr5 193242182 193242601 -9842931 - L1ME3 LINE L1 -342 5824 5374 1876 178 3 10 chr5 193242887 193243191 -9842341 - AluJb SINE Alu -10 302 1 644 297 51 17 chr5 193243257 193243550 -9841982 - L1MC4a LINE L1 -1879 5929 5627 1383 243 71 37 chr5 193243562 193243998 -9841534 - MLT1H LTR MaLR 0 549 99 699 200 29 7 chr5 193243998 193244138 -9841394 - AluJo SINE Alu -85 227 85 469 133 44 11 chr5 193244139 193244229 -9841303 - MLT1H LTR MaLR -445 104 12 270 370 19 0 chr5 193244242 193244350 -9841182 - L1MC4a LINE L1 -2195 5613 5504 860 313 46 19 chr5 193244668 193245147 -9840385 - L2 LINE L2 -11 3302 2811 214 233 23 0 chr5 193245142 193245185 -9840347 - L2 LINE L2 -14 3299 3256 * 245 267 53 13 chr5 193246586 193246661 -9838871 - MIR SINE MIR -59 203 126 461 290 30 24 chr5 193246672 193246841 -9838691 - MIR SINE MIR -45 217 48 298 248 261 7 chr5 193247224 193247377 -9838155 + MIR SINE MIR 1 192 -70 1960 208 42 11 chr5 193247575 193248022 -9837510 - MLT1C LTR MaLR -6 461 1 714 309 11 2 chr5 193248428 193248658 -9836874 + MIR SINE MIR 34 262 0 324 0 0 0 chr5 193248675 193248711 -9836821 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 487 283 60 16 chr5 193248783 193248967 -9836565 + MIR SINE MIR 51 242 -20 257 234 75 19 chr5 193249513 193249620 -9835912 + LTR33 LTR ERVL 342 454 -67 220 191 44 0 chr5 193249687 193249755 -9835777 + CT-rich Low_complexity Low_complexity 3 73 0 954 233 107 25 chr5 193249756 193250159 -9835373 - L2 LINE L2 -1 3312 2877 181 286 0 20 chr5 193250486 193250535 -9834997 + L2 LINE L2 3266 3313 0 215 244 21 44 chr5 193250594 193250766 -9834766 - L2 LINE L2 -217 3055 2920 305 256 176 40 chr5 193250838 193250963 -9834569 + MIR SINE MIR 108 249 -13 495 193 53 21 chr5 193251248 193251453 -9834079 - ORSL DNA AcHobo -30 245 1 266 193 169 12 chr5 193251489 193251572 -9833960 - MIR SINE MIR -79 129 34 184 309 12 12 chr5 193251747 193251831 -9833701 - MIR3 SINE MIR -23 185 102 201 74 0 0 chr5 193252076 193252103 -9833429 + (CCCCG)n Simple_repeat Simple_repeat 1 27 0 186 171 0 0 chr5 193252681 193252722 -9832810 + GA-rich Low_complexity Low_complexity 3 43 0 428 196 7 33 chr5 193252828 193252981 -9832551 + GA-rich Low_complexity Low_complexity 4 152 0 1326 78 0 0 chr5 193252985 193253165 -9832367 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 274 314 0 0 chr5 193253643 193253729 -9831803 - MIR SINE MIR -80 182 97 203 368 32 11 chr5 193253963 193254058 -9831474 - MIR SINE MIR -152 110 14 542 268 20 0 chr5 193254064 193254217 -9831315 + MIR SINE MIR 52 207 -55 497 229 41 8 chr5 193254291 193254413 -9831119 - MIR SINE MIR -53 209 84 23 0 0 0 chr5 193254479 193254502 -9831030 + AT_rich Low_complexity Low_complexity 1 23 0 282 332 71 20 chr5 193255174 193255370 -9830162 + MIR SINE MIR 35 240 -22 598 257 175 40 chr5 193255446 193255823 -9829709 - MLT1K LTR MaLR 0 588 161 928 103 0 27 chr5 193256334 193256518 -9829014 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 207 235 0 0 chr5 193256518 193256569 -9828963 + CT-rich Low_complexity Low_complexity 4 54 0 205 95 24 24 chr5 193256876 193256918 -9828614 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 285 301 12 0 chr5 193257262 193257345 -9828187 + GA-rich Low_complexity Low_complexity 2 85 0 287 333 16 8 chr5 193257422 193257548 -9827984 - MIR SINE MIR -56 152 26 411 285 109 6 chr5 193257778 193257943 -9827589 + MIR SINE MIR 2 183 -79 2166 34 0 0 chr5 193258670 193258907 -9826625 + AluY SINE Alu 75 311 0 2367 113 3 0 chr5 193259164 193259475 -9826057 + AluSq SINE Alu 1 312 -1 611 259 35 0 chr5 193259622 193259765 -9825767 - MIR SINE MIR -37 225 78 2373 99 0 0 chr5 193260408 193260701 -9824831 - AluSc SINE Alu -16 293 1 235 310 91 75 chr5 193261907 193262534 -9822998 + L2 LINE L2 2600 3234 -38 1977 170 0 0 chr5 193262944 193263256 -9822276 - AluJb SINE Alu 0 312 1 22 0 0 0 chr5 193263908 193263930 -9821602 + AT_rich Low_complexity Low_complexity 1 22 0 557 246 16 0 chr5 193265033 193265159 -9820373 - L2 LINE L2 0 3313 3186 708 309 13 30 chr5 193265300 193265536 -9819996 + MIR SINE MIR 18 249 -13 1590 231 42 13 chr5 193267159 193267613 -9817919 - MLT1C LTR MaLR 0 467 1 384 284 74 58 chr5 193267626 193267816 -9817716 - L1ME4a LINE L1 -33 6088 5896 363 316 60 0 chr5 193267985 193268118 -9817414 - MIR SINE MIR -75 187 47 371 236 149 81 chr5 193269246 193269394 -9816138 - MER115 DNA AcHobo -400 293 136 216 135 0 0 chr5 193269928 193269965 -9815567 + (ACTG)n Simple_repeat Simple_repeat 4 40 0 634 210 28 0 chr5 193269968 193270111 -9815421 - L1MB4 LINE L1 -6 6174 6028 433 358 80 5 chr5 193270138 193270325 -9815207 - MIR SINE MIR -36 226 26 270 303 71 39 chr5 193270934 193271089 -9814443 - L1ME4a LINE L1 -197 5924 5765 1054 159 0 0 chr5 193271099 193271262 -9814270 + MER20 DNA MER1_type 42 204 -15 2954 221 35 0 chr5 193271356 193271980 -9813552 - MER82 DNA MER2_type 0 653 8 1853 170 3 7 chr5 193272824 193273148 -9812384 + AluJb SINE Alu 1 323 0 362 366 6 0 chr5 193273536 193273700 -9811832 - L1ME LINE L1 -302 5819 5655 402 288 140 9 chr5 193273724 193273953 -9811579 + MER102b DNA MER1_type 83 341 0 398 285 5 121 chr5 193273966 193274173 -9811359 - L1ME LINE L1 -713 5461 5279 491 241 0 17 chr5 193274458 193274574 -9810958 + MIR SINE MIR 21 134 -74 323 320 199 0 chr5 193274641 193274797 -9810735 + MIR3 SINE MIR 12 198 -10 257 288 219 30 chr5 193274876 193275404 -9810128 - L2 LINE L2 -12 3260 2624 1972 144 7 16 chr5 193276182 193276488 -9809044 - AluSx SINE Alu -9 303 1 216 336 45 9 chr5 193276721 193276831 -9808701 + MIR SINE MIR 34 147 -61 2101 215 46 11 chr5 193277191 193277730 -9807802 - MER74A LTR ERVL 0 558 1 400 279 29 0 chr5 193277730 193277834 -9807698 + MIR SINE MIR 47 153 -109 279 262 76 0 chr5 193278153 193278302 -9807230 - MIR SINE MIR -21 241 79 269 291 85 14 chr5 193278313 193278454 -9807078 + MER91A DNA MER1_type 1 151 -45 361 116 107 0 chr5 193278631 193278743 -9806789 + FRAM SINE Alu 43 166 0 214 283 50 0 chr5 193278953 193279013 -9806519 - MIR SINE MIR -118 144 82 1967 113 3 23 chr5 193279238 193279539 -9805993 + AluSq SINE Alu 1 295 -18 239 283 0 22 chr5 193279604 193279696 -9805836 + L2 LINE L2 3183 3272 0 181 61 61 30 chr5 193279786 193279819 -9805713 + MIR SINE MIR 117 150 -112 222 226 67 14 chr5 193280347 193280450 -9805082 + MIR SINE MIR 88 194 -14 763 263 190 6 chr5 193281415 193281746 -9803786 + L2 LINE L2 2027 2418 -896 2341 122 0 0 chr5 193281823 193282134 -9803398 - AluSq SINE Alu 0 313 3 1329 83 24 0 chr5 193283164 193283333 -9802199 - AluSq SINE Alu -140 173 1 495 296 45 20 chr5 193283584 193283783 -9801749 - L2 LINE L2 -234 3079 2876 2302 105 0 3 chr5 193283856 193284152 -9801380 + AluSg SINE Alu 1 295 -15 962 139 58 29 chr5 193284152 193284325 -9801207 + AluSg/x SINE Alu 134 311 -1 602 164 96 0 chr5 193284325 193284429 -9801103 - AluJo/FLAM SINE Alu -196 116 3 1135 181 0 34 chr5 193284983 193285188 -9800344 - AluJo SINE Alu -45 267 70 534 172 25 8 chr5 193285197 193285319 -9800213 - AluSc SINE Alu -11 298 175 372 331 119 27 chr5 193285495 193285906 -9799626 + L2 LINE L2 2160 2608 -706 231 167 0 0 chr5 193287048 193287090 -9798442 + (TA)n Simple_repeat Simple_repeat 1 42 0 2133 121 0 0 chr5 193287147 193287482 -9798050 + AluSx SINE Alu 1 312 0 2521 115 90 9 chr5 193288627 193289062 -9796470 - Tigger4(Zombi) DNA MER2_type 0 2731 2262 549 195 31 4 chr5 193289060 193289198 -9796334 - Tigger4(Zombi) DNA MER2_type -2585 146 2 * 606 305 139 11 chr5 193289317 193289750 -9795782 + L2 LINE L2 1993 2480 -834 34 55 0 0 chr5 193290448 193290503 -9795029 + AT_rich Low_complexity Low_complexity 1 55 0 348 167 0 15 chr5 193290791 193290857 -9794675 + MLT1K LTR MaLR 522 586 -2 492 245 20 87 chr5 193290901 193291097 -9794435 - MIR SINE MIR -60 202 20 291 345 81 18 chr5 193292920 193293143 -9792389 - MIR SINE MIR -19 243 7 332 281 43 55 chr5 193293168 193293332 -9792200 - L1ME4a LINE L1 -168 5953 5792 261 0 0 0 chr5 193293468 193293497 -9792035 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2471 86 0 0 chr5 193293784 193294086 -9791446 - AluSg SINE Alu -8 302 1 1825 140 49 11 chr5 193294097 193294382 -9791150 - AluJo SINE Alu -16 296 1 296 283 54 54 chr5 193294639 193294845 -9790687 + MIR SINE MIR 40 245 -17 293 211 13 53 chr5 193295423 193295499 -9790033 + L2 LINE L2 3240 3312 -1 1978 115 97 0 chr5 193296706 193296985 -9788547 - AluSx SINE Alu -6 306 1 344 345 153 0 chr5 193297940 193298117 -9787415 - MIR SINE MIR -57 205 2 379 307 47 27 chr5 193298388 193298538 -9786994 - L2 LINE L2 0 3313 3161 215 256 85 24 chr5 193298858 193298940 -9786592 + MIR SINE MIR 65 151 -111 417 300 80 7 chr5 193299535 193299685 -9785847 - MIR SINE MIR -88 174 14 2602 75 0 0 chr5 193300013 193300318 -9785214 - AluY SINE Alu -6 305 1 2145 117 0 3 chr5 193301657 193301939 -9783593 + AluSx SINE Alu 1 281 -31 344 93 103 28 chr5 193302113 193302220 -9783312 - Harlequin LTR ERV1 -5942 954 840 1126 228 84 117 chr5 193302330 193303040 -9782492 - Harlequin LTR ERV1 -5962 687 1 1663 154 87 36 chr5 193303049 193303405 -9782127 - LTR10A LTR ERV1 -61 548 175 194 0 39 0 chr5 193303485 193303511 -9782021 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 230 273 104 0 chr5 193303876 193303953 -9781579 - LTR10A LTR ERV1 -511 98 14 270 267 0 47 chr5 193303968 193304054 -9781478 + MIR SINE MIR 126 207 -55 345 302 43 0 chr5 193304255 193304371 -9781161 + MIR SINE MIR 24 144 -118 3783 175 49 61 chr5 193304462 193305428 -9780104 + LTR13 LTR ERVK 1 954 0 429 293 164 7 chr5 193306829 193307239 -9778293 + L2 LINE L2 2783 3266 -6 2187 111 34 0 chr5 193307774 193308072 -9777460 - AluSx SINE Alu -4 308 1 282 283 30 50 chr5 193308618 193308717 -9776815 + MIR SINE MIR 108 204 -58 211 205 0 0 chr5 193309260 193309299 -9776233 - L2 LINE L2 -14 3299 3261 * 583 225 51 123 chr5 193309266 193309519 -9776013 - MIR SINE MIR -14 248 14 452 241 9 19 chr5 193310552 193310660 -9774872 - MIR SINE MIR -67 141 35 355 192 39 0 chr5 193311030 193311108 -9774424 - MIR SINE MIR -90 118 38 397 326 99 29 chr5 193311634 193311977 -9773555 + L2 LINE L2 2896 3262 -10 735 278 208 15 chr5 193312167 193312509 -9773023 + L2 LINE L2 2906 3313 0 630 265 43 22 chr5 193312515 193312700 -9772832 - MIR SINE MIR -73 189 1 205 261 224 34 chr5 193312900 193313065 -9772467 - MIR SINE MIR -11 251 35 425 217 39 23 chr5 193313414 193313543 -9771989 - MIR SINE MIR -29 233 103 357 199 40 74 chr5 193314224 193314400 -9771132 - MER112 DNA MER1_type -61 199 30 362 268 203 14 chr5 193314475 193314613 -9770919 + MIR SINE MIR 27 190 -72 268 314 159 19 chr5 193314922 193315237 -9770295 - L2 LINE L2 -88 3184 2826 381 282 98 11 chr5 193315640 193315814 -9769718 - MIR SINE MIR -40 222 34 366 290 101 7 chr5 193316408 193316546 -9768986 + MIR SINE MIR 16 166 -96 324 245 122 29 chr5 193316733 193316872 -9768660 - MIR SINE MIR -32 230 79 259 269 150 42 chr5 193317363 193317530 -9768002 + L3 LINE CR1 1315 1499 -78 2379 107 3 0 chr5 193317653 193317961 -9767571 - AluSx SINE Alu 0 312 4 224 262 0 16 chr5 193318019 193318080 -9767452 - MIR SINE MIR -113 149 90 283 276 82 31 chr5 193318812 193318910 -9766622 + MIR SINE MIR 17 119 -89 1746 196 94 62 chr5 193318925 193319456 -9766076 - LTR10A LTR ERV1 -61 548 1 17342 92 19 6 chr5 193319457 193322301 -9763231 - Harlequin LTR ERV1 -5 6644 1817 326 229 169 0 chr5 193322307 193322390 -9763142 + LTR8 LTR ERV1 157 253 -438 5184 99 13 27 chr5 193322392 193323332 -9762200 - HERV17 LTR ERV1 -5176 1720 747 902 102 40 15 chr5 193323463 193324124 -9761408 + (CA)n Simple_repeat Simple_repeat 1 677 0 478 247 156 0 chr5 193324892 193325123 -9760409 - LTR33 LTR ERVL -240 281 15 189 271 156 10 chr5 193325143 193325239 -9760293 - MIR SINE MIR -115 147 38 333 0 0 0 chr5 193325395 193325432 -9760100 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 262 212 7 117 chr5 193325536 193325673 -9759859 - MIR3 SINE MIR -86 122 1 246 298 60 0 chr5 193325720 193325804 -9759728 + L1ME LINE L1 5713 5801 -361 1844 181 19 8 chr5 193325887 193326246 -9759286 + L1MB8 LINE L1 5424 5786 -392 203 61 30 0 chr5 193326254 193326287 -9759245 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1991 104 9 31 chr5 193326293 193326611 -9758921 - AluSx SINE Alu -1 311 1 2227 145 22 8 chr5 193326612 193327012 -9758520 + L1MB8 LINE L1 5773 6178 0 196 333 117 17 chr5 193327645 193327765 -9757767 - MIR SINE MIR -21 241 110 280 228 9 88 chr5 193327840 193327954 -9757578 - MLT1K LTR MaLR -26 562 458 2096 101 42 7 chr5 193328022 193328340 -9757192 - AluSx SINE Alu 0 312 1 341 230 14 0 chr5 193329256 193329330 -9756202 + MIR SINE MIR 78 152 -56 192 162 14 27 chr5 193329877 193329951 -9755581 + CT-rich Low_complexity Low_complexity 2 74 0 241 360 13 0 chr5 193331369 193331444 -9754088 + MIR SINE MIR 47 122 -140 1792 144 32 51 chr5 193331501 193331814 -9753718 + AluJb SINE Alu 1 307 -5 337 392 7 0 chr5 193332276 193332419 -9753113 + MIR SINE MIR 92 235 -27 844 238 75 106 chr5 193332445 193332861 -9752671 - MLT1J2 LTR MaLR -24 426 24 307 281 178 14 chr5 193333663 193333809 -9751723 - MIR SINE MIR -76 186 17 652 311 136 33 chr5 193334134 193334644 -9750888 - L2 LINE L2 -1 3312 2753 561 55 0 0 chr5 193334716 193334789 -9750743 + (TGGA)n Simple_repeat Simple_repeat 1 73 0 688 249 18 50 chr5 193335188 193335420 -9750112 - MIR SINE MIR -1 261 42 509 289 30 53 chr5 193335827 193336090 -9749442 + L1ME4a LINE L1 5410 5666 -455 562 209 81 52 chr5 193336125 193336297 -9749235 - MER63A DNA MER1_type -3 207 31 2634 54 0 6 chr5 193336349 193336662 -9748870 + AluY SINE Alu 1 311 0 412 325 16 21 chr5 193336674 193336868 -9748664 + L1ME4a LINE L1 5728 5920 -201 183 129 0 0 chr5 193336885 193336916 -9748616 + (CA)n Simple_repeat Simple_repeat 1 31 0 243 206 78 49 chr5 193337137 193337239 -9748293 + L1ME4a LINE L1 5961 6065 -56 221 274 32 0 chr5 193337757 193337819 -9747713 - L2 LINE L2 0 3272 3209 1660 158 46 11 chr5 193337885 193338005 -9747527 + AluJb SINE Alu 1 115 -197 225 0 0 0 chr5 193338005 193338030 -9747502 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1660 158 46 11 chr5 193338030 193338194 -9747338 + AluJb SINE Alu 115 295 -17 285 125 21 0 chr5 193338194 193338242 -9747290 - MIR SINE MIR -72 136 88 280 213 177 41 chr5 193338889 193338997 -9746535 + MIR SINE MIR 8 128 -80 3512 227 49 43 chr5 193339047 193340012 -9745520 + L1MEc LINE L1 14 983 -5413 6604 135 19 28 chr5 193340014 193340856 -9744676 + L1MA8 LINE L1 4006 4835 -1311 2089 135 10 0 chr5 193340856 193341153 -9744379 - AluSx SINE Alu -12 300 1 6604 135 19 28 chr5 193341153 193341535 -9743997 + L1MA8 LINE L1 4835 5219 -927 3632 130 32 5 chr5 193341535 193342150 -9743382 + L1MA8 LINE L1 5658 6291 0 617 200 174 38 chr5 193342165 193342287 -9743245 + L1MEc LINE L1 1011 1115 -5281 2224 87 27 13 chr5 193342287 193342587 -9742945 + AluSx SINE Alu 1 304 -8 617 200 174 38 chr5 193342587 193342729 -9742803 + L1MEc LINE L1 1115 1311 -5085 507 239 127 46 chr5 193342748 193342945 -9742587 - MIR SINE MIR -2 260 48 395 285 170 17 chr5 193343006 193343241 -9742291 - L1ME LINE L1 -297 5824 5554 592 246 39 39 chr5 193343252 193343431 -9742101 + MIR SINE MIR 64 242 -20 2403 94 0 0 chr5 193344020 193344319 -9741213 + AluSq SINE Alu 1 299 -14 634 228 25 25 chr5 193344801 193344963 -9740569 + MER21B LTR ERV1 329 490 -373 487 279 85 5 chr5 193345166 193345367 -9740165 - MIR SINE MIR -10 252 36 417 288 15 38 chr5 193345560 193345627 -9739905 - L2 LINE L2 -19 3294 3230 2000 158 57 11 chr5 193345627 193345976 -9739556 - MLT1A1 LTR MaLR 0 365 1 417 288 15 38 chr5 193345976 193346040 -9739492 - L2 LINE L2 -83 3230 3166 2243 123 0 0 chr5 193346094 193346396 -9739136 + AluSg SINE Alu 1 302 -8 329 323 94 14 chr5 193346518 193346741 -9738791 - L2 LINE L2 -410 2904 2664 231 314 57 40 chr5 193347006 193347130 -9738402 - MIR SINE MIR -80 182 57 2311 99 0 7 chr5 193348084 193348387 -9737145 - AluSq SINE Alu -12 301 1 384 266 48 27 chr5 193348434 193348589 -9736943 + MER5A DNA MER1_type 24 189 0 201 315 21 63 chr5 193348750 193348893 -9736639 - L2 LINE L2 -217 3055 2919 226 350 0 0 chr5 193349010 193349090 -9736442 + HsTC2 DNA Tc2 6 85 -1813 394 163 33 24 chr5 193349609 193349723 -9735809 + MIR SINE MIR 69 183 -61 1097 270 86 35 chr5 193349726 193350294 -9735238 - L2 LINE L2 0 3313 2718 395 133 0 12 chr5 193351410 193351493 -9734039 + (TTCA)n Simple_repeat Simple_repeat 1 82 0 324 279 38 19 chr5 193351958 193352116 -9733416 + L2 LINE L2 2944 3104 -209 468 199 78 49 chr5 193352282 193352424 -9733108 - MIR SINE MIR -42 166 22 2295 113 0 0 chr5 193353191 193353501 -9732031 + AluSx SINE Alu 1 310 -2 504 171 62 41 chr5 193353523 193353669 -9731863 - Charlie2a DNA MER1_type -21 2841 2693 * 551 306 16 0 chr5 193353652 193353845 -9731687 - Charlie2a DNA MER1_type -1200 1662 1467 302 206 71 92 chr5 193354146 193354287 -9731245 - L1ME3A LINE L1 -108 6062 5925 1994 252 49 49 chr5 193354305 193355627 -9729905 - L1ME3A LINE L1 -234 5936 4616 342 0 0 0 chr5 193355627 193355665 -9729867 + (CA)n Simple_repeat Simple_repeat 2 39 0 1994 252 49 49 chr5 193355665 193355833 -9729699 - L1ME3A LINE L1 -1554 4616 4450 1677 165 45 28 chr5 193356251 193356542 -9728990 + AluJo SINE Alu 1 296 -16 696 328 55 17 chr5 193356547 193357022 -9728510 - L1ME4a LINE L1 -23 6098 5606 775 279 31 4 chr5 193357087 193357316 -9728216 - MIR SINE MIR -14 248 14 242 277 89 45 chr5 193357407 193357519 -9728013 + MIR SINE MIR 29 145 -63 299 197 56 0 chr5 193358052 193358123 -9727409 - MIR SINE MIR -148 114 40 254 216 170 57 chr5 193358215 193358365 -9727167 - MIR SINE MIR -70 192 24 2282 112 26 3 chr5 193358431 193358736 -9726796 + AluSx SINE Alu 1 312 0 241 299 185 16 chr5 193358926 193359110 -9726422 - MIR SINE MIR -17 245 31 1027 246 20 20 chr5 193359744 193359992 -9725540 - MIR SINE MIR -14 248 1 731 238 102 29 chr5 193360045 193360251 -9725281 - MIR SINE MIR -10 252 32 426 259 12 10 chr5 193360326 193360458 -9725074 - MIR SINE MIR -58 150 17 622 287 102 4 chr5 193360556 193360768 -9724764 - MIR SINE MIR -6 256 28 718 255 18 25 chr5 193360962 193361182 -9724350 + MIR SINE MIR 7 224 -38 682 168 149 25 chr5 193361270 193361431 -9724101 + MIR SINE MIR 81 261 -1 2419 74 0 10 chr5 193361912 193362211 -9723321 + AluY SINE Alu 1 296 -15 254 332 19 87 chr5 193362287 193362495 -9723037 + L3 LINE CR1 531 724 -853 781 220 57 17 chr5 193362524 193362701 -9722831 + MIR SINE MIR 13 196 -66 312 269 5 137 chr5 193362756 193362810 -9722722 + L3 LINE CR1 765 825 -752 2045 122 3 32 chr5 193362810 193363121 -9722411 + AluSx SINE Alu 4 305 -7 312 269 5 137 chr5 193363121 193363278 -9722254 + L3 LINE CR1 825 948 -629 2282 78 10 7 chr5 193363640 193363936 -9721596 + AluY SINE Alu 2 298 -13 1280 198 27 4 chr5 193363996 193364254 -9721278 - L1PA16 LINE L1 -2 6164 5901 2015 136 17 0 chr5 193364255 193364557 -9720975 - AluSx SINE Alu -5 307 1 1015 134 0 0 chr5 193364558 193364692 -9720840 - AluSq/x SINE Alu -179 134 1 1244 120 0 0 chr5 193364693 193364884 -9720648 - L1PB4 LINE L1 -249 5907 5717 352 230 23 0 chr5 193365006 193365093 -9720439 + MIR SINE MIR 59 147 -115 407 284 47 8 chr5 193365936 193366063 -9719469 + MIR SINE MIR 49 180 -82 330 273 27 18 chr5 193366494 193366604 -9718928 - L3 LINE CR1 -69 1508 1398 356 239 90 54 chr5 193366608 193366775 -9718757 - L3 LINE CR1 -459 1118 946 257 276 13 13 chr5 193366827 193366903 -9718629 + CT-rich Low_complexity Low_complexity 4 79 0 244 287 57 33 chr5 193366934 193367056 -9718476 - L2 LINE L2 -8 3305 3181 2247 125 3 0 chr5 193367806 193368110 -9717422 + AluSx SINE Alu 1 305 -7 365 306 37 0 chr5 193368400 193368508 -9717024 + MIR SINE MIR 61 172 -90 236 254 18 0 chr5 193368572 193368627 -9716905 + MIR SINE MIR 91 146 -62 476 317 176 9 chr5 193368688 193369007 -9716525 + L2 LINE L2 2942 3313 0 351 295 93 0 chr5 193369732 193369871 -9715661 - MLT1K LTR MaLR -436 152 1 397 240 20 0 chr5 193370069 193370169 -9715363 + MIR3 SINE MIR 87 188 -20 2201 118 0 26 chr5 193370350 193370658 -9714874 + AluSx SINE Alu 1 298 -14 1185 278 127 14 chr5 193370777 193371490 -9714042 + L2 LINE L2 2522 3313 0 186 321 144 37 chr5 193372260 193372447 -9713085 - MIR SINE MIR 0 262 56 556 262 140 13 chr5 193373599 193373828 -9711704 - MIR SINE MIR -2 260 3 539 231 12 0 chr5 193373844 193374013 -9711519 + (TTCA)n Simple_repeat Simple_repeat 1 171 0 1145 144 89 0 chr5 193374239 193374441 -9711091 - L1MB5 LINE L1 0 6174 5955 1118 196 88 39 chr5 193374625 193374931 -9710601 - L1ME2 LINE L1 -119 6045 5725 876 254 16 28 chr5 193375066 193375318 -9710214 + MIR SINE MIR 1 249 -13 397 139 0 0 chr5 193376734 193376806 -9708726 + MER53 DNA DNA 1 72 -117 939 133 53 7 chr5 193376810 193376961 -9708571 - AluJb SINE Alu -23 289 132 332 203 0 135 chr5 193376970 193377065 -9708467 + MER53 DNA DNA 75 149 -40 2227 95 0 3 chr5 193377065 193377369 -9708163 + AluSx SINE Alu 8 310 -2 332 203 0 135 chr5 193377369 193377406 -9708126 + MER53 DNA DNA 149 189 0 270 356 0 0 chr5 193377613 193377700 -9707832 - MIR SINE MIR -68 140 54 630 212 22 0 chr5 193377717 193377854 -9707678 + MER5B DNA MER1_type 16 155 -23 2009 84 3 28 chr5 193378094 193378378 -9707154 - AluSx SINE Alu -35 277 1 899 207 43 30 chr5 193378864 193379096 -9706436 - MER46A DNA MER2_type 0 236 2 1523 277 78 33 chr5 193379298 193379850 -9705682 - MLT1K LTR MaLR -2 586 10 362 305 149 17 chr5 193379915 193380089 -9705443 - MIR SINE MIR -11 251 55 343 218 0 0 chr5 193380180 193380258 -9705274 - MIR SINE MIR -70 138 61 249 260 55 14 chr5 193380608 193380681 -9704851 - MIR SINE MIR -74 188 113 437 298 111 12 chr5 193381490 193381742 -9703790 + L2 LINE L2 2160 2436 -878 272 346 102 0 chr5 193381855 193381982 -9703550 + L2 LINE L2 2407 2546 -768 464 270 53 13 chr5 193382397 193382549 -9702983 + MIR SINE MIR 31 188 -74 298 281 78 113 chr5 193382920 193383329 -9702203 + L2 LINE L2 2906 3300 -13 577 275 98 33 chr5 193383330 193383574 -9701958 - MIR SINE MIR -1 261 2 514 215 189 8 chr5 193383793 193384053 -9701479 - L1ME4a LINE L1 -2 6119 5813 1958 138 191 6 chr5 193384082 193384443 -9701089 - MSTA LTR MaLR 0 428 1 277 216 134 10 chr5 193384448 193384545 -9700987 - L1ME4a LINE L1 -23 6098 5990 273 261 91 0 chr5 193384812 193384900 -9700632 - Charlie8 DNA MER1_type -2214 203 108 390 287 110 0 chr5 193385212 193385348 -9700184 - L2 LINE L2 -1 3271 3121 2265 88 0 3 chr5 193385495 193385791 -9699741 + AluSq SINE Alu 1 295 -18 268 295 39 0 chr5 193385857 193385935 -9699597 - L2 LINE L2 -24 3289 3209 778 240 26 60 chr5 193385945 193386178 -9699354 + MIR SINE MIR 8 232 -30 278 282 0 14 chr5 193386288 193386359 -9699173 + GA-rich Low_complexity Low_complexity 2 71 0 25 65 0 0 chr5 193386772 193386818 -9698714 + GC_rich Low_complexity Low_complexity 1 46 0 274 235 12 24 chr5 193387368 193387453 -9698079 + (CCCCG)n Simple_repeat Simple_repeat 5 88 0 563 231 15 0 chr5 193387508 193387638 -9697894 - MER5A DNA MER1_type -57 132 1 377 269 81 19 chr5 193388177 193388337 -9697195 - MIR SINE MIR -73 189 20 355 246 131 0 chr5 193388301 193388423 -9697109 + MIR SINE MIR 92 229 -33 * 1140 255 129 11 chr5 193388730 193389110 -9696422 - MLT1K LTR MaLR -2 586 162 254 214 14 14 chr5 193390448 193390518 -9695014 + GA-rich Low_complexity Low_complexity 1 70 0 342 267 91 30 chr5 193392603 193392768 -9692764 - MER104 DNA Tc2 0 180 6 395 279 47 8 chr5 193392769 193392898 -9692634 - MIR SINE MIR -107 155 22 221 290 32 0 chr5 193393575 193393637 -9691895 + L2 LINE L2 3204 3267 -5 202 283 0 0 chr5 193393702 193393748 -9691784 - L2 LINE L2 -8 3264 3219 360 278 65 78 chr5 193394769 193395014 -9690518 + L1ME4a LINE L1 5520 5761 -360 564 267 139 12 chr5 193395014 193395408 -9690124 - MLT1K LTR MaLR 0 588 88 1743 129 8 4 chr5 193395448 193395711 -9689821 + AluSg SINE Alu 47 310 0 470 320 14 0 chr5 193395829 193395976 -9689556 + MIR SINE MIR 87 235 -27 335 339 7 53 chr5 193395991 193396274 -9689258 + L1ME4a LINE L1 5836 6105 -16 2269 86 3 3 chr5 193396996 193397298 -9688234 + AluSq SINE Alu 1 302 -11 835 291 122 28 chr5 193397303 193397657 -9687875 - MLT1K LTR MaLR -2 586 200 360 303 125 7 chr5 193398067 193398219 -9687313 - MIR SINE MIR 0 262 93 195 276 66 0 chr5 193398385 193398461 -9687071 - MIR SINE MIR -146 116 36 230 289 0 0 chr5 193398499 193398551 -9686981 + polypurine Low_complexity Low_complexity 3 54 0 311 264 0 0 chr5 193399330 193399402 -9686130 + MIR SINE MIR 81 152 -56 180 0 0 0 chr5 193401143 193401163 -9684369 + (CTGGGG)n Simple_repeat Simple_repeat 2 21 0 2036 109 31 0 chr5 193401455 193401748 -9683784 + AluSx SINE Alu 1 302 -10 240 214 113 98 chr5 193402053 193402319 -9683213 + L1ME4a LINE L1 5850 6119 -2 2078 119 3 0 chr5 193402407 193402709 -9682823 + AluSq SINE Alu 1 303 -10 308 291 70 63 chr5 193402750 193403021 -9682511 - L2 LINE L2 -78 3194 2922 463 302 112 62 chr5 193404289 193404341 -9681191 + L2 LINE L2 2936 2984 -288 249 57 0 0 chr5 193404341 193404376 -9681156 + (CA)n Simple_repeat Simple_repeat 2 36 0 463 302 112 62 chr5 193404376 193404644 -9680888 + L2 LINE L2 2984 3272 0 255 228 177 25 chr5 193405313 193405392 -9680140 + MLT1K LTR MaLR 2 92 -496 2226 100 0 25 chr5 193405536 193405856 -9679676 - AluSx SINE Alu 0 312 1 349 278 87 9 chr5 193405858 193405973 -9679559 + L2 LINE L2 2693 2816 -498 208 313 0 15 chr5 193405964 193406031 -9679501 + L2 LINE L2 2998 3063 -250 * 937 199 5 11 chr5 193406060 193406251 -9679281 - AluJb SINE Alu -7 305 116 181 293 154 32 chr5 193406263 193406386 -9679146 + L2 LINE L2 3167 3304 -9 1184 326 174 21 chr5 193406404 193406522 -9679010 - L2 LINE L2 -655 2659 2560 2206 149 19 19 chr5 193406522 193406885 -9678647 - MLT1A1 LTR MaLR -2 363 1 1184 326 174 21 chr5 193406885 193406921 -9678611 - L2 LINE L2 -754 2560 2531 2977 181 72 48 chr5 193406921 193407630 -9677902 + LTR8A LTR ERV1 2 727 0 1184 326 174 21 chr5 193407630 193408222 -9677310 - L2 LINE L2 -783 2531 2031 1798 154 9 38 chr5 193408222 193408363 -9677169 + AluJb SINE Alu 1 144 -168 1930 142 0 13 chr5 193408363 193408673 -9676859 + AluSx SINE Alu 3 308 -4 1798 154 9 38 chr5 193408673 193408850 -9676682 + AluJb SINE Alu 144 310 -2 1184 326 174 21 chr5 193408850 193408934 -9676598 - L2 LINE L2 -1283 2031 1961 1009 267 4 9 chr5 193408934 193409159 -9676373 - MER58A DNA MER1_type 0 224 1 1184 326 174 21 chr5 193409159 193409599 -9675933 - L2 LINE L2 -1353 1961 1191 790 244 41 46 chr5 193409601 193410005 -9675527 + MLT1A2 LTR MaLR 14 374 0 413 336 80 29 chr5 193410006 193410494 -9675038 - L2 LINE L2 -2121 1193 681 221 292 4 4 chr5 193410867 193411102 -9674430 + (TG)n Simple_repeat Simple_repeat 1 235 0 263 28 28 0 chr5 193411107 193411143 -9674389 + (GA)n Simple_repeat Simple_repeat 2 38 0 991 136 0 24 chr5 193411412 193411581 -9673951 + FRAM SINE Alu 1 165 -11 556 306 60 45 chr5 193411583 193412066 -9673466 - L1ME LINE L1 -313 5808 5319 261 258 15 0 chr5 193412431 193412497 -9673035 + L1ME LINE L1 22 88 -5982 2264 68 3 3 chr5 193412505 193412798 -9672734 - AluY SINE Alu -18 293 1 993 130 0 7 chr5 193412798 193412944 -9672588 - AluSq/x SINE Alu -168 145 1 2198 121 0 6 chr5 193413255 193413568 -9671964 + AluSx SINE Alu 1 311 -1 1244 267 87 14 chr5 193413746 193414312 -9671220 - L1ME LINE L1 -3190 2956 2350 442 322 115 42 chr5 193414318 193414426 -9671106 + L2 LINE L2 2079 2178 -1136 2277 78 3 23 chr5 193414426 193414733 -9670799 - AluSg SINE Alu -9 301 1 442 322 115 42 chr5 193414733 193415248 -9670284 + L2 LINE L2 2178 2748 -566 2171 111 7 0 chr5 193415271 193415578 -9669954 + AluSx SINE Alu 1 309 -3 694 300 24 20 chr5 193415580 193415827 -9669705 - MIR SINE MIR 0 262 15 221 312 165 65 chr5 193415847 193416299 -9669233 + L2 LINE L2 2766 3269 -3 249 233 27 27 chr5 193416770 193416843 -9668689 - MIR SINE MIR -77 185 113 506 196 270 0 chr5 193416924 193417072 -9668460 + MER5A DNA MER1_type 2 189 0 439 295 81 17 chr5 193417797 193417970 -9667562 + MIR SINE MIR 24 207 -55 231 286 91 13 chr5 193418505 193418582 -9666950 + MIR SINE MIR 78 160 -102 236 233 24 86 chr5 193419028 193419181 -9666351 - MIR SINE MIR -61 147 15 199 245 38 0 chr5 193419544 193419597 -9665935 - MIR SINE MIR -66 142 88 564 311 31 45 chr5 193419840 193420062 -9665470 + MIR SINE MIR 30 248 -14 313 289 93 62 chr5 193420449 193420867 -9664665 - L2 LINE L2 -1 3312 2882 241 179 0 0 chr5 193420893 193420932 -9664600 - MIR SINE MIR -7 255 217 338 269 33 12 chr5 193421106 193421228 -9664304 - MIR SINE MIR -66 142 43 206 324 59 0 chr5 193421621 193421723 -9663809 + L2 LINE L2 3165 3272 0 1083 118 5 25 chr5 193421723 193422315 -9663217 + (TGGA)n Simple_repeat Simple_repeat 1 580 0 290 267 0 23 chr5 193422764 193422850 -9662682 - MIR SINE MIR -63 145 62 389 316 28 88 chr5 193423117 193423548 -9661984 + L2 LINE L2 2826 3230 -42 479 254 114 35 chr5 193424108 193424336 -9661196 - MLT1K LTR MaLR -342 246 1 480 274 82 0 chr5 193424339 193424474 -9661058 + MIR SINE MIR 47 192 -70 603 291 89 11 chr5 193424841 193425020 -9660512 + MIR SINE MIR 20 212 -50 558 221 147 16 chr5 193425081 193425271 -9660261 + MER113 DNA MER1_type? 4 218 -303 907 235 20 0 chr5 193425273 193425477 -9660055 - MIR SINE MIR -21 241 34 601 304 53 11 chr5 193425492 193425775 -9659757 + MER113 DNA MER1_type? 222 516 -5 2779 235 111 101 chr5 193425917 193426414 -9659118 + L1MC4 LINE L1 6166 6657 -1385 2228 93 27 23 chr5 193426414 193426715 -9658817 - AluSx SINE Alu -10 302 1 2779 235 111 101 chr5 193426715 193427935 -9657597 + L1MC4 LINE L1 6657 7914 -128 237 65 0 0 chr5 193427935 193427966 -9657566 + (TG)n Simple_repeat Simple_repeat 2 32 0 2779 235 111 101 chr5 193427966 193428022 -9657510 + L1MC4 LINE L1 7914 7968 -74 1028 170 27 45 chr5 193428023 193428246 -9657286 - MER20 DNA MER1_type 0 219 1 1138 276 96 14 chr5 193429094 193429369 -9656163 + L2 LINE L2 2776 3027 -286 207 69 0 0 chr5 193429369 193429398 -9656134 + (CCCCCA)n Simple_repeat Simple_repeat 5 33 0 1138 276 96 14 chr5 193429398 193429597 -9655935 + L2 LINE L2 3027 3308 -5 441 324 111 16 chr5 193429885 193430191 -9655341 + L2 LINE L2 2925 3259 -54 196 125 25 0 chr5 193430371 193430411 -9655121 - L3 LINE CR1 -113 1464 1424 256 89 44 0 chr5 193430998 193431043 -9654489 - MIR SINE MIR -65 197 151 * 1086 276 137 8 chr5 193431040 193431296 -9654236 - L2 LINE L2 0 3313 3091 2026 101 4 0 chr5 193431296 193431554 -9653978 + AluSp SINE Alu 36 294 -19 1086 276 137 8 chr5 193431554 193432098 -9653434 - L2 LINE L2 -222 3091 2414 529 279 34 0 chr5 193432085 193432232 -9653300 - MIR SINE MIR -103 159 8 * 367 239 34 0 chr5 193432520 193432608 -9652924 - MIR SINE MIR -65 197 107 316 310 122 9 chr5 193433242 193433357 -9652175 - MIR SINE MIR -63 145 20 347 171 110 24 chr5 193433404 193433486 -9652046 + MER46C DNA MER2_type 3 91 -247 249 313 0 42 chr5 193433490 193433586 -9651946 + MIR SINE MIR 61 152 -56 230 202 21 96 chr5 193433608 193433702 -9651830 - MER5A DNA MER1_type -91 98 12 * 247 372 0 0 chr5 193433695 193433789 -9651743 + L2 LINE L2 2694 2787 -527 461 225 158 29 chr5 193433792 193433933 -9651599 + MER46C DNA MER2_type 101 279 -59 2319 163 18 23 chr5 193433933 193434369 -9651163 + Tigger2a DNA MER2_type 1 434 0 461 225 158 29 chr5 193434369 193434436 -9651096 + MER46C DNA MER2_type 279 336 -2 403 302 78 17 chr5 193434450 193434629 -9650903 - MIR SINE MIR -22 240 51 231 333 11 0 chr5 193434810 193434900 -9650632 - L2 LINE L2 -508 2806 2716 895 189 16 0 chr5 193434919 193435104 -9650428 - MER5A DNA MER1_type -1 188 1 314 138 17 0 chr5 193437403 193437461 -9648071 + CT-rich Low_complexity Low_complexity 4 62 0 231 36 0 0 chr5 193437624 193437652 -9647880 + (TG)n Simple_repeat Simple_repeat 1 28 0 2213 94 3 11 chr5 193437690 193437998 -9647534 - AluSq SINE Alu 0 306 1 476 177 0 9 chr5 193438156 193438269 -9647263 + (TG)n Simple_repeat Simple_repeat 1 112 0 291 188 16 0 chr5 193438275 193438339 -9647193 - L2 LINE L2 -248 3065 3001 237 238 238 28 chr5 193438519 193438805 -9646727 - L2 LINE L2 -606 2708 2363 542 261 130 24 chr5 193439060 193439267 -9646265 - MIR SINE MIR -21 241 13 324 161 0 0 chr5 193439288 193439350 -9646182 + (CA)n Simple_repeat Simple_repeat 1 62 0 282 250 70 20 chr5 193439669 193439769 -9645763 + MIR SINE MIR 81 185 -77 581 210 25 13 chr5 193440511 193440668 -9644864 + L1ME4a LINE L1 5963 6121 0 2043 121 11 0 chr5 193441097 193441401 -9644131 + AluSx SINE Alu 1 307 0 2458 70 0 3 chr5 193441488 193441787 -9643745 - AluY SINE Alu -9 302 5 2476 95 0 0 chr5 193441951 193442256 -9643276 + AluSx SINE Alu 1 305 -7 203 239 22 0 chr5 193442730 193442776 -9642756 - L2 LINE L2 -3 3269 3223 219 69 0 0 chr5 193442876 193442905 -9642627 + (T)n Simple_repeat Simple_repeat 1 29 0 2363 110 0 0 chr5 193442918 193443217 -9642315 + AluSx SINE Alu 1 299 -13 2694 152 15 22 chr5 193443241 193443786 -9641746 + L1MB8 LINE L1 5638 6178 0 295 247 141 0 chr5 193444360 193444445 -9641087 - L2 LINE L2 -13 3300 3204 825 164 23 6 chr5 193444461 193444638 -9640894 + GA-rich Low_complexity Low_complexity 1 180 0 189 0 0 0 chr5 193444659 193444680 -9640852 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2294 100 0 3 chr5 193444935 193445226 -9640306 + AluY SINE Alu 1 290 -21 325 271 57 16 chr5 193445229 193445351 -9640181 - L2 LINE L2 -556 2758 2632 1165 174 0 71 chr5 193445515 193445739 -9639793 - AluJo SINE Alu -104 208 1 2291 108 0 3 chr5 193445841 193446138 -9639394 - AluSx SINE Alu -16 296 1 26 64 0 0 chr5 193446257 193446304 -9639228 + AT_rich Low_complexity Low_complexity 1 47 0 599 245 88 0 chr5 193446395 193446554 -9638978 + MIR SINE MIR 61 233 -29 409 95 0 0 chr5 193446627 193446690 -9638842 + Alu SINE Alu 237 299 -12 805 266 14 86 chr5 193446701 193447063 -9638469 - L2 LINE L2 -20 3252 2919 291 255 151 0 chr5 193447304 193447410 -9638122 + MIR SINE MIR 124 245 -17 210 256 35 116 chr5 193447889 193448147 -9637385 + L2 LINE L2 2818 3054 -218 2503 70 20 0 chr5 193448252 193448553 -9636979 - AluY SINE Alu -4 307 1 242 362 38 0 chr5 193448684 193448789 -9636743 + MER91C DNA MER1_type 3 111 -29 602 303 136 6 chr5 193448834 193449055 -9636477 + MIR SINE MIR 9 256 -6 396 321 57 0 chr5 193449273 193449482 -9636050 + L1MC4a LINE L1 5679 5899 -1909 659 237 26 11 chr5 193449495 193449685 -9635847 - MER105 DNA DNA -11 193 1 183 273 121 0 chr5 193449905 193449971 -9635561 + MIR SINE MIR 75 148 -60 1230 237 55 97 chr5 193450639 193451204 -9634328 - L1MC5 LINE L1 -385 7576 7036 202 237 0 51 chr5 193451517 193451576 -9633956 + MIR SINE MIR 141 196 -66 1715 166 4 0 chr5 193452095 193452372 -9633160 + AluJb SINE Alu 1 278 -34 479 298 69 11 chr5 193452512 193452700 -9632832 + MIR SINE MIR 6 204 -58 389 231 58 0 chr5 193452758 193452862 -9632670 + MER81 DNA DNA 3 112 -2 968 139 0 0 chr5 193452881 193453025 -9632507 - AluSg/x SINE Alu 0 312 169 2346 125 0 0 chr5 193453965 193454277 -9631255 + AluSx SINE Alu 1 312 0 843 122 0 43 chr5 193454310 193454498 -9631034 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 494 231 15 15 chr5 193455021 193455155 -9630377 - L2 LINE L2 0 3272 3139 311 247 6 0 chr5 193455472 193455630 -9629902 + (TG)n Simple_repeat Simple_repeat 2 160 0 219 305 61 0 chr5 193455647 193455729 -9629803 - L2 LINE L2 -308 2964 2878 652 259 132 0 chr5 193455775 193455987 -9629545 - MIR SINE MIR -16 246 7 347 244 24 41 chr5 193455985 193456108 -9629424 - L2 LINE L2 -490 2824 2704 * 6005 157 30 8 chr5 193456200 193457325 -9628207 + L1MC1 LINE L1 5186 6333 0 674 264 62 34 chr5 193457332 193457624 -9627908 + L1ME2 LINE L1 5813 6112 -52 872 234 179 40 chr5 193457736 193457773 -9627759 - MLT1J LTR MaLR -113 398 367 1666 258 58 26 chr5 193457773 193458276 -9627256 - LTR40a LTR ERVL 0 519 1 872 234 179 40 chr5 193458276 193458584 -9626948 - MLT1J LTR MaLR -144 367 5 2223 156 11 64 chr5 193458941 193459198 -9626334 - MSTB LTR MaLR 0 426 157 2096 148 0 0 chr5 193459198 193459503 -9626029 + AluSx SINE Alu 4 308 -4 2223 156 11 64 chr5 193459503 193459542 -9625990 - MSTB LTR MaLR -269 157 117 2399 93 0 7 chr5 193459542 193459843 -9625689 + AluSx SINE Alu 1 299 -13 2223 156 11 64 chr5 193459843 193459995 -9625537 - MSTB LTR MaLR -309 117 1 380 245 0 29 chr5 193460110 193460212 -9625320 - MIR SINE MIR -72 136 38 361 266 78 16 chr5 193461129 193461257 -9624275 - L2 LINE L2 -1 3271 3136 208 217 0 22 chr5 193461953 193461999 -9623533 - MIR SINE MIR -11 251 207 665 236 85 8 chr5 193462012 193462271 -9623261 - L2 LINE L2 -350 2964 2686 2199 132 3 0 chr5 193462453 193462763 -9622769 + AluSp SINE Alu 1 311 -2 355 191 11 11 chr5 193462763 193462852 -9622680 + GA-rich Low_complexity Low_complexity 3 91 0 683 269 79 28 chr5 193463477 193463808 -9621724 + L1MEc LINE L1 1278 1634 -4762 2259 100 7 3 chr5 193463808 193464107 -9621425 + AluSx SINE Alu 1 300 -12 683 269 79 28 chr5 193464107 193464169 -9621363 + L1MEc LINE L1 1634 1691 -4705 414 250 57 0 chr5 193464190 193464314 -9621218 - L2 LINE L2 -612 2702 2572 548 161 0 0 chr5 193464317 193464404 -9621128 - AluJ/FLAM SINE Alu -225 87 1 1187 257 20 14 chr5 193464404 193464750 -9620782 - L2 LINE L2 -732 2582 2235 382 242 42 0 chr5 193464805 193464900 -9620632 - MIR SINE MIR -3 259 161 2320 102 3 3 chr5 193464911 193465215 -9620317 - AluSq SINE Alu -9 304 1 212 0 36 0 chr5 193465239 193465267 -9620265 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 301 262 24 36 chr5 193466551 193466635 -9618897 - MIR3 SINE MIR -53 155 73 224 294 76 0 chr5 193467132 193467224 -9618308 - MIR SINE MIR -64 144 46 235 242 54 81 chr5 193467420 193467465 -9618067 - MIR SINE MIR -69 139 94 2401 91 0 0 chr5 193467465 193467762 -9617770 + AluSc SINE Alu 1 297 -12 235 242 54 81 chr5 193467762 193467859 -9617673 - MIR SINE MIR -114 94 9 309 51 0 0 chr5 193468185 193468224 -9617308 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 186 147 0 0 chr5 193469170 193469204 -9616328 + MIR SINE MIR 114 147 -115 306 215 99 25 chr5 193470273 193470394 -9615138 + HAL1b LINE L1 1191 1320 -28 1874 81 0 4 chr5 193470470 193470705 -9614827 + AluSg/x SINE Alu 66 299 -11 231 318 30 61 chr5 193472501 193472633 -9612899 + MIR3 SINE MIR 50 160 -48 202 159 0 45 chr5 193474761 193474805 -9610727 + C-rich Low_complexity Low_complexity 6 47 0 206 258 11 79 chr5 193474869 193474958 -9610574 - MIR SINE MIR -58 150 68 2199 93 41 3 chr5 193476183 193476473 -9609059 + AluSc SINE Alu 1 301 -8 379 212 0 35 chr5 193477565 193477650 -9607882 + MIR SINE MIR 70 151 -111 279 234 40 105 chr5 193478140 193478264 -9607268 + L2 LINE L2 3175 3290 -23 443 263 113 56 chr5 193478329 193478542 -9606990 - MIR SINE MIR -7 255 31 385 196 78 39 chr5 193478857 193478959 -9606573 - MIR3 SINE MIR -21 187 82 1030 231 15 42 chr5 193479154 193479340 -9606192 + MIR SINE MIR 6 184 -78 1738 198 18 9 chr5 193479340 193479678 -9605854 + MER58B DNA MER1_type 1 341 0 1030 231 15 42 chr5 193479678 193479755 -9605777 + MIR SINE MIR 184 262 0 432 215 107 20 chr5 193479824 193479973 -9605559 + MER104 DNA Tc2 4 165 -15 2415 100 0 0 chr5 193480283 193480593 -9604939 - AluSg SINE Alu 0 310 1 550 286 0 7 chr5 193481141 193481288 -9604244 - MIR SINE MIR -40 222 77 655 161 42 0 chr5 193481743 193481861 -9603671 - MLT1B LTR MaLR 0 390 268 318 111 37 0 chr5 193481845 193481899 -9603633 - MLT1C LTR MaLR -405 62 7 * 357 314 14 95 chr5 193481979 193482232 -9603300 + L1MB7 LINE L1 4516 4788 -1358 1705 189 3 21 chr5 193482232 193482523 -9603009 + AluJo SINE Alu 1 286 -26 2042 121 0 14 chr5 193482525 193482822 -9602710 - AluSg SINE Alu -17 293 1 357 314 14 95 chr5 193482822 193483135 -9602397 + L1MB7 LINE L1 4789 5039 -1107 737 126 0 0 chr5 193483158 193483269 -9602263 - HY1 scRNA scRNA -1 111 1 2096 132 10 3 chr5 193483287 193483590 -9601942 - AluSx SINE Alu -7 305 1 272 263 15 30 chr5 193483594 193483727 -9601805 + L1MB7 LINE L1 5030 5160 -986 24 0 0 0 chr5 193483770 193483794 -9601738 + AT_rich Low_complexity Low_complexity 1 24 0 586 177 16 32 chr5 193483894 193484018 -9601514 - AluSq/x SINE Alu -190 123 2 254 271 15 30 chr5 193484023 193484156 -9601376 + L1MC/D LINE L1 5030 5160 -986 24 0 0 0 chr5 193484199 193484223 -9601309 + AT_rich Low_complexity Low_complexity 1 24 0 2337 94 0 31 chr5 193484232 193484552 -9600980 + AluY SINE Alu 1 310 -1 496 253 39 61 chr5 193484612 193484733 -9600799 + L1MC/D LINE L1 5272 5387 -2421 2328 102 7 0 chr5 193484733 193485037 -9600495 - AluSx SINE Alu -6 306 1 496 253 39 61 chr5 193485037 193485144 -9600388 + L1MC/D LINE L1 5387 5495 -2313 * 612 265 119 0 chr5 193485142 193485395 -9600137 + L1MC4 LINE L1 7706 7988 -54 1096 131 68 0 chr5 193485409 193485600 -9599932 + L1MA9 LINE L1 5852 6055 -257 352 85 17 0 chr5 193485624 193485683 -9599849 + L1MA9 LINE L1 6253 6312 0 913 164 20 99 chr5 193485685 193486050 -9599482 + L1MB7 LINE L1 5181 5518 -660 394 152 76 0 chr5 193486056 193486135 -9599397 + MSTC LTR MaLR 1 85 -343 * 462 51 0 0 chr5 193486130 193486189 -9599343 + MSTD LTR MaLR 338 396 0 2559 196 25 62 chr5 193486190 193486740 -9598792 + L1MB7 LINE L1 5522 6091 -93 2165 128 0 3 chr5 193486740 193487045 -9598487 - AluSg SINE Alu -6 304 1 1549 215 0 10 chr5 193487055 193487348 -9598184 - AluJo SINE Alu -22 290 1 2559 196 25 62 chr5 193487348 193487475 -9598057 + L1MB7 LINE L1 6100 6184 0 2054 124 142 26 chr5 193487911 193488051 -9597481 + MSTA LTR MaLR 3 125 -303 2055 120 0 0 chr5 193488051 193488334 -9597198 + AluSx SINE Alu 17 299 -13 2054 124 142 26 chr5 193488334 193488533 -9596999 + MSTA LTR MaLR 125 393 -35 2161 128 0 3 chr5 193488533 193488830 -9596702 - AluSg1 SINE Alu -13 296 1 2054 124 142 26 chr5 193488830 193488869 -9596663 + MSTA LTR MaLR 393 426 -2 2109 139 3 0 chr5 193489028 193489331 -9596201 + AluJb SINE Alu 1 304 -8 285 98 0 0 chr5 193489339 193489380 -9596152 + (GAAAA)n Simple_repeat Simple_repeat 5 45 0 315 257 74 29 chr5 193490146 193490321 -9595211 - L2 LINE L2 -411 2903 2721 224 133 56 35 chr5 193490443 193490513 -9595019 - MIR SINE MIR -87 121 84 480 209 0 0 chr5 193490729 193490901 -9594631 + (CA)n Simple_repeat Simple_repeat 1 172 0 432 200 0 0 chr5 193490916 193491051 -9594481 + (CA)n Simple_repeat Simple_repeat 2 136 0 2118 81 5 8 chr5 193491352 193491743 -9593789 + LTR7 LTR ERV1 1 440 -10 421 303 21 14 chr5 193491833 193491978 -9593554 - MER5B DNA MER1_type -32 146 1 206 296 0 0 chr5 193492043 193492097 -9593435 + L2 LINE L2 3218 3271 -1 2200 97 7 7 chr5 193492188 193492486 -9593046 - AluSp SINE Alu -15 298 1 232 291 45 30 chr5 193493381 193493515 -9592017 - MIR SINE MIR -97 165 30 239 279 189 8 chr5 193493956 193494078 -9591454 + MIR3 SINE MIR 19 162 -46 569 291 11 11 chr5 193494137 193494319 -9591213 - MIR SINE MIR -21 241 60 231 290 90 50 chr5 193494393 193494493 -9591039 + L2 LINE L2 3151 3254 -18 332 250 76 56 chr5 193494580 193494724 -9590808 + MIR SINE MIR 61 207 -55 236 210 116 51 chr5 193495187 193495325 -9590207 - MIR3 SINE MIR -55 153 7 662 273 120 1 chr5 193495635 193495862 -9589670 + MIR SINE MIR 11 262 0 1656 147 32 51 chr5 193496014 193496326 -9589206 - AluJo SINE Alu -6 306 1 202 326 0 0 chr5 193496719 193496768 -9588764 - L2 LINE L2 -12 3260 3212 223 349 70 0 chr5 193496777 193496906 -9588626 - MIR SINE MIR -1 261 124 211 174 217 0 chr5 193497460 193497506 -9588026 - MIR SINE MIR -62 146 91 2361 103 3 3 chr5 193498395 193498761 -9586771 + AluSq SINE Alu 1 366 0 468 319 7 7 chr5 193499324 193499459 -9586073 + MIR SINE MIR 5 139 -123 740 206 64 0 chr5 193499674 193499815 -9585717 - MIR SINE MIR -102 160 11 196 313 0 0 chr5 193499850 193499898 -9585634 + L2 LINE L2 3214 3261 -11 190 204 41 20 chr5 193500174 193500223 -9585309 - MIR SINE MIR -205 57 8 326 311 58 53 chr5 193500242 193500448 -9585084 + L1M4 LINE L1 2166 2372 -3774 2487 80 3 0 chr5 193500671 193500973 -9584559 - AluSg SINE Alu -5 305 3 184 267 22 0 chr5 193501171 193501216 -9584316 + L2 LINE L2 3263 3308 -5 214 259 163 59 chr5 193501524 193501659 -9583873 - L2 LINE L2 -17 3255 3107 447 319 57 39 chr5 193501714 193501903 -9583629 + MIR SINE MIR 18 213 -49 228 67 0 0 chr5 193501903 193501933 -9583599 + (TTA)n Simple_repeat Simple_repeat 3 32 0 447 319 57 39 chr5 193501933 193501972 -9583560 + MIR SINE MIR 213 250 -12 616 266 101 0 chr5 193502658 193502827 -9582705 + MIR SINE MIR 34 219 -43 328 329 187 16 chr5 193503146 193503456 -9582076 - L2 LINE L2 -16 3256 2894 508 221 41 8 chr5 193504090 193504212 -9581320 - L2 LINE L2 0 3313 3188 368 322 8 0 chr5 193504240 193504358 -9581174 - MIR SINE MIR -12 250 132 2227 102 7 23 chr5 193504464 193504768 -9580764 + AluSx SINE Alu 1 299 -13 332 272 22 66 chr5 193505552 193505688 -9579844 - L2 LINE L2 0 3313 3184 501 268 19 80 chr5 193505688 193505901 -9579631 - MER63A DNA MER1_type -9 201 2 182 62 31 0 chr5 193506096 193506128 -9579404 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 781 169 0 8 chr5 193506128 193506245 -9579287 - FLAM_C SINE Alu -194 118 1 2065 138 51 59 chr5 193506274 193506665 -9578867 + MLT1B LTR MaLR 1 388 -2 753 198 0 0 chr5 193506784 193506910 -9578622 - FLAM_A SINE Alu -7 126 1 2569 142 16 9 chr5 193507031 193507467 -9578065 - L1MA5 LINE L1 -4 6296 5858 634 212 46 146 chr5 193507771 193507869 -9577663 - L2 LINE L2 0 3313 3207 2187 138 0 3 chr5 193507869 193508180 -9577352 + AluJo SINE Alu 3 312 0 634 212 46 146 chr5 193508180 193508430 -9577102 - L2 LINE L2 -106 3207 3000 355 248 256 0 chr5 193508462 193508587 -9576945 - L2 LINE L2 -550 2764 2608 369 26 66 26 chr5 193508825 193508901 -9576631 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 735 145 8 32 chr5 193508901 193509151 -9576381 + GA-rich Low_complexity Low_complexity 1 244 0 461 279 175 16 chr5 193509938 193510121 -9575411 - MER115 DNA AcHobo -318 375 164 2787 35 0 0 chr5 193510237 193510548 -9574984 - AluY SINE Alu 0 311 1 390 271 46 26 chr5 193510640 193510791 -9574741 + MIR SINE MIR 1 154 -108 498 298 32 38 chr5 193511253 193511389 -9574143 + MIR3 SINE MIR 12 148 -60 1517 193 0 25 chr5 193511389 193511674 -9573858 + AluJo SINE Alu 31 308 -4 498 298 32 38 chr5 193511674 193511695 -9573837 + MIR3 SINE MIR 148 168 -40 1187 166 114 60 chr5 193511766 193512116 -9573416 - LTR8A LTR ERV1 0 727 359 1085 43 0 22 chr5 193512140 193512279 -9573253 - AluY SINE Alu 0 311 176 1678 180 7 20 chr5 193512295 193512623 -9572909 - AluJo SINE Alu 0 312 1 1233 170 69 0 chr5 193512847 193513244 -9572288 + MER21A LTR ERV1 1 440 -423 1429 108 0 35 chr5 193513249 193513480 -9572052 + MER21A LTR ERV1 703 925 -6 861 270 63 77 chr5 193513505 193513624 -9571908 + L1ME3A LINE L1 4456 4575 -1587 2283 133 0 0 chr5 193513624 193513932 -9571600 - AluSg SINE Alu 0 310 3 861 270 63 77 chr5 193513932 193514555 -9570977 + L1ME3A LINE L1 4575 5205 -957 1838 183 7 3 chr5 193514555 193514845 -9570687 + AluJb SINE Alu 1 291 -21 2202 104 7 0 chr5 193514855 193515144 -9570388 + AluSq SINE Alu 3 293 -20 861 270 63 77 chr5 193515144 193515544 -9569988 + L1ME3A LINE L1 5214 5578 -584 2415 77 7 0 chr5 193515552 193515849 -9569683 + AluY SINE Alu 1 299 -12 1051 144 11 6 chr5 193515849 193516023 -9569509 + AluSg/x SINE Alu 132 306 -4 328 309 0 17 chr5 193516024 193516140 -9569392 + L1ME3A LINE L1 5607 5720 -442 2283 121 0 0 chr5 193516149 193516447 -9569085 + AluSx SINE Alu 1 298 -14 1093 156 4 78 chr5 193516454 193516698 -9568834 + L1MB3 LINE L1 5444 5669 -514 282 157 0 0 chr5 193516698 193516749 -9568783 + AluSx SINE Alu 1 51 -251 1421 164 161 26 chr5 193516756 193517146 -9568386 - LTR7 LTR ERV1 -7 443 1 1726 123 16 16 chr5 193517146 193517397 -9568135 + AluSx SINE Alu 47 297 -15 3156 102 15 8 chr5 193517397 193517878 -9567654 + L1MB3 LINE L1 5659 6142 -41 2170 129 10 0 chr5 193517879 193518189 -9567343 + AluSq SINE Alu 1 313 0 290 244 11 22 chr5 193518205 193518295 -9567237 + (TA)n Simple_repeat Simple_repeat 2 90 0 736 258 51 97 chr5 193518360 193518571 -9566961 + L1ME3A LINE L1 5730 5949 -221 234 0 0 0 chr5 193518571 193518597 -9566935 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 736 258 51 97 chr5 193518597 193518624 -9566908 + L1ME3A LINE L1 5949 5976 -194 2321 115 3 0 chr5 193518624 193518928 -9566604 + AluJb SINE Alu 1 305 -7 736 258 51 97 chr5 193518928 193519119 -9566413 + L1ME3A LINE L1 5976 6140 -30 386 336 88 30 chr5 193519936 193520231 -9565301 - L2 LINE L2 -13 3259 2948 198 143 0 0 chr5 193520566 193520601 -9564931 + (A)n Simple_repeat Simple_repeat 1 35 0 251 192 182 50 chr5 193520641 193520740 -9564792 + MIR SINE MIR 34 145 -117 304 278 86 56 chr5 193520763 193520961 -9564571 + L1ME4a LINE L1 5822 6025 -96 28 0 0 26 chr5 193521063 193521082 -9564450 + AT_rich Low_complexity Low_complexity 1 19 -19 2093 95 62 0 chr5 193521082 193521356 -9564176 + AluSg SINE Alu 1 291 -19 28 0 0 26 chr5 193521356 193521375 -9564157 + AT_rich Low_complexity Low_complexity 19 38 0 189 216 0 0 chr5 193521513 193521550 -9563982 + L2 LINE L2 3268 3304 -9 1897 159 7 16 chr5 193521951 193522260 -9563272 - AluJb SINE Alu 0 312 7 2087 149 3 16 chr5 193522309 193522624 -9562908 - AluSx SINE Alu -1 311 1 283 314 66 16 chr5 193523115 193523236 -9562296 - MIR3 SINE MIR -22 186 60 189 283 100 0 chr5 193523279 193523339 -9562193 - MIR SINE MIR -80 182 117 289 212 45 0 chr5 193523677 193523743 -9561789 - MIR SINE MIR -58 150 82 407 270 88 44 chr5 193524418 193524622 -9560910 - MIR SINE MIR -14 248 36 1680 187 28 39 chr5 193525392 193525782 -9559750 - L1MC4 LINE L1 -822 7220 6835 799 126 1 49 chr5 193525784 193525956 -9559576 - MER46B DNA MER2_type 0 236 71 731 115 0 76 chr5 193525924 193526081 -9559451 - MER46B DNA MER2_type -58 178 34 * 1260 126 0 0 chr5 193526117 193526292 -9559240 - AluSp SINE Alu -2 311 137 1780 142 3 73 chr5 193526292 193526608 -9558924 - AluSx SINE Alu -18 294 1 909 185 0 0 chr5 193526609 193526760 -9558772 - MER46B DNA MER2_type -210 26 1 1020 209 157 6 chr5 193526763 193527088 -9558444 - L1MC4 LINE L1 -1211 6831 6458 1179 245 90 35 chr5 193527206 193527959 -9557573 - L2 LINE L2 0 3313 2527 25 0 0 0 chr5 193528216 193528241 -9557291 + AT_rich Low_complexity Low_complexity 1 25 0 271 253 77 4 chr5 193528264 193528406 -9557126 + L1MEd LINE L1 1410 1468 -4955 1004 297 78 40 chr5 193528462 193528536 -9556996 - LTR33 LTR ERVL 0 521 451 2242 130 0 0 chr5 193528536 193528844 -9556688 - AluSx SINE Alu -4 308 1 1004 297 78 40 chr5 193528844 193529271 -9556261 - LTR33 LTR ERVL -70 451 1 372 268 45 14 chr5 193529289 193529568 -9555964 + L1MEd LINE L1 1707 2101 -5021 196 255 108 20 chr5 193529598 193529700 -9555832 - L2 LINE L2 -832 2482 2372 502 211 301 33 chr5 193530596 193530809 -9554723 + MLT1F LTR MaLR 236 505 -37 * 522 229 0 50 chr5 193530799 193530939 -9554593 + MSTC LTR MaLR 27 159 -215 928 65 24 16 chr5 193530956 193531079 -9554453 + AluSq/x SINE Alu 10 133 -179 1016 163 88 14 chr5 193531080 193531295 -9554237 + MSTC LTR MaLR 197 427 -1 251 180 16 0 chr5 193531297 193531358 -9554174 + MLT1F LTR MaLR 478 539 -3 197 244 90 13 chr5 193531366 193531444 -9554088 + L2 LINE L2 2972 3055 -217 1376 294 51 8 chr5 193531452 193531924 -9553608 + MLT1K LTR MaLR 5 496 -92 318 148 0 0 chr5 193531942 193531996 -9553536 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 182 280 20 0 chr5 193532712 193532762 -9552770 - L2 LINE L2 -4 3268 3218 1040 204 98 0 chr5 193532802 193533037 -9552495 - MLT1F1 LTR MaLR 0 567 310 1107 94 47 116 chr5 193533067 193533203 -9552329 - MER30 DNA MER1_type -13 217 73 2353 78 13 16 chr5 193533203 193533509 -9552023 - AluSq SINE Alu -8 305 1 1107 94 47 116 chr5 193533509 193533543 -9551989 - MER30 DNA MER1_type -157 73 38 2379 94 0 3 chr5 193533543 193533850 -9551682 - AluSg SINE Alu -4 306 1 1107 94 47 116 chr5 193533850 193533911 -9551621 - MER30 DNA MER1_type -192 38 1 712 235 45 43 chr5 193533938 193534213 -9551319 - MLT1E LTR MaLR -293 274 1 1996 200 87 16 chr5 193534402 193534906 -9550626 - MLT1F LTR MaLR -2 540 1 1154 49 11 70 chr5 193535289 193535474 -9550058 - L1PA7 LINE L1 0 6154 5981 885 269 183 28 chr5 193535652 193535785 -9549747 - MLT1J LTR MaLR 0 511 400 2471 73 0 7 chr5 193535785 193536085 -9549447 - AluSx SINE Alu -13 299 2 885 269 183 28 chr5 193536085 193536345 -9549187 - MLT1J LTR MaLR -111 400 57 246 188 213 0 chr5 193536439 193536519 -9549013 - MER5A DNA MER1_type -86 103 7 411 21 0 0 chr5 193536694 193536742 -9548790 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 233 300 60 0 chr5 193537310 193537410 -9548122 - MIR SINE MIR -33 229 124 23 0 0 0 chr5 193537411 193537434 -9548098 + GC_rich Low_complexity Low_complexity 1 23 0 31 0 0 0 chr5 193537911 193537942 -9547590 + GC_rich Low_complexity Low_complexity 1 31 0 252 268 249 10 chr5 193538922 193539131 -9546401 + MIR SINE MIR 2 260 -2 194 369 31 31 chr5 193539711 193539841 -9545691 - MIR SINE MIR -58 150 21 256 285 212 7 chr5 193540817 193540968 -9544564 + MIR SINE MIR 73 254 -8 * 422 316 21 36 chr5 193540954 193541147 -9544385 + L2 LINE L2 3081 3270 -43 251 273 57 11 chr5 193541660 193541748 -9543784 + MIR3 SINE MIR 65 156 -52 938 176 0 24 chr5 193541846 193542016 -9543516 - MER45A DNA AcHobo -12 166 1 805 171 0 0 chr5 193542217 193542340 -9543192 - FLAM_C SINE Alu -20 123 1 2432 94 0 0 chr5 193542571 193542870 -9542662 + AluSx SINE Alu 5 303 -9 1594 184 7 34 chr5 193542883 193543176 -9542356 + AluJo SINE Alu 1 285 -27 375 78 0 0 chr5 193543176 193543227 -9542305 + (CA)n Simple_repeat Simple_repeat 2 52 0 552 251 103 15 chr5 193543307 193543510 -9542022 - MIR SINE MIR -14 248 28 214 256 0 13 chr5 193544059 193544129 -9541403 + MER5B DNA MER1_type 1 172 -6 366 237 237 13 chr5 193544334 193544486 -9541046 + MER5A DNA MER1_type 4 189 0 298 240 72 32 chr5 193545488 193545613 -9539919 - L1MD2 LINE L1 -210 6149 6020 225 139 23 0 chr5 193545624 193545667 -9539865 - L1MB1 LINE L1 -18 6171 6128 1429 113 21 0 chr5 193545667 193545861 -9539671 - AluSq SINE Alu -24 289 92 3298 158 43 18 chr5 193545861 193546471 -9539061 - L1MB1 LINE L1 -227 5941 5304 2400 95 0 7 chr5 193546471 193546775 -9538757 + AluSx SINE Alu 1 302 -10 3298 158 43 18 chr5 193546775 193546912 -9538620 - L1MB1 LINE L1 -864 5304 5172 200 245 128 0 chr5 193546915 193547009 -9538523 - MIR SINE MIR -122 140 35 433 322 26 7 chr5 193547376 193547528 -9538004 + MIR SINE MIR 43 197 -65 333 327 109 28 chr5 193548542 193548753 -9536779 - MIR SINE MIR -24 238 11 374 277 89 0 chr5 193549103 193549215 -9536317 - L2 LINE L2 0 3272 3151 1707 260 57 2 chr5 193549262 193549774 -9535758 - L1MD3 LINE L1 -4 7991 7452 249 254 54 39 chr5 193550217 193550347 -9535185 + L3 LINE CR1 1134 1265 -312 340 296 0 0 chr5 193550413 193550501 -9535031 + MIR SINE MIR 170 257 -5 874 264 74 65 chr5 193550580 193551024 -9534508 - MLT1J2 LTR MaLR 0 450 3 2371 86 0 3 chr5 193551121 193551422 -9534110 - AluSc SINE Alu -9 300 1 291 271 71 14 chr5 193551427 193551567 -9533965 + MER113 DNA MER1_type? 73 220 -301 568 224 0 45 chr5 193551611 193551767 -9533765 + MER113 DNA MER1_type? 298 446 -75 223 311 22 82 chr5 193551836 193551971 -9533561 - L2 LINE L2 -78 3235 3109 458 254 46 0 chr5 193552196 193552326 -9533206 + L2 LINE L2 3136 3271 -1 276 304 65 11 chr5 193552687 193552779 -9532753 - MIR SINE MIR -106 156 60 248 365 71 0 chr5 193553493 193553619 -9531913 - MIR SINE MIR -10 252 118 214 162 0 0 chr5 193553892 193553929 -9531603 + (CACCC)n Simple_repeat Simple_repeat 4 40 0 409 232 33 18 chr5 193554128 193554294 -9531238 + MIR SINE MIR 17 187 -75 410 272 44 7 chr5 193554390 193554526 -9531006 + Charlie8 DNA MER1_type 1 141 -2276 2452 91 0 3 chr5 193554527 193554836 -9530696 + AluSx SINE Alu 1 308 -4 2231 118 0 0 chr5 193554838 193555134 -9530398 + AluSx SINE Alu 4 299 -13 283 267 150 17 chr5 193555362 193555482 -9530050 + MIR SINE MIR 15 150 -112 203 333 12 0 chr5 193556134 193556215 -9529317 + L2 LINE L2 3144 3225 -47 219 344 161 5 chr5 193556265 193556451 -9529081 + MIR SINE MIR 47 261 -1 218 211 81 122 chr5 193557031 193557154 -9528378 - MIR SINE MIR -34 228 111 250 306 103 56 chr5 193557310 193557542 -9527990 + MIR SINE MIR 20 262 0 2115 123 7 7 chr5 193557706 193558006 -9527526 + AluJb SINE Alu 1 300 -12 3067 171 34 8 chr5 193558009 193558599 -9526933 + MER6A DNA MER2_type 1 605 0 340 373 22 0 chr5 193559011 193559145 -9526387 - L2 LINE L2 0 3272 3136 231 382 59 0 chr5 193560446 193560548 -9524984 + MIR SINE MIR 111 218 -44 426 183 73 0 chr5 193560776 193560858 -9524674 + MIR SINE MIR 106 193 -69 447 157 20 70 chr5 193561089 193561241 -9524291 + MIR SINE MIR 58 198 -63 448 308 75 66 chr5 193561481 193561829 -9523703 - L2 LINE L2 -2 3270 2920 193 258 30 30 chr5 193563129 193563195 -9522337 - MIR SINE MIR -88 174 109 299 280 11 0 chr5 193563296 193563389 -9522143 - MER91A DNA MER1_type -102 94 1 465 315 111 4 chr5 193563904 193564139 -9521393 - MIR SINE MIR -1 261 2 634 287 93 26 chr5 193564629 193565143 -9520389 + L2 LINE L2 2750 3312 -1 376 301 29 22 chr5 193565139 193565275 -9520257 + MIR SINE MIR 114 250 -12 * 2078 127 16 3 chr5 193565582 193565889 -9519643 - AluSq SINE Alu 0 313 3 234 0 0 0 chr5 193565912 193565938 -9519594 + (A)n Simple_repeat Simple_repeat 1 26 0 1018 233 67 104 chr5 193566290 193566608 -9518924 + MER113 DNA MER1_type? 1 294 -227 1550 121 129 12 chr5 193566608 193566856 -9518676 - AluSg SINE Alu -33 277 1 1018 233 67 104 chr5 193566856 193567048 -9518484 + MER113 DNA MER1_type? 294 492 -29 233 229 43 0 chr5 193567435 193567505 -9518027 + MER112 DNA MER1_type 5 77 -183 2049 128 13 7 chr5 193567519 193567817 -9517715 + AluSx SINE Alu 1 300 -12 1666 103 33 21 chr5 193567871 193568113 -9517419 - AluSx SINE Alu -8 304 60 263 255 32 11 chr5 193568221 193568315 -9517217 + MER112 DNA MER1_type 165 260 0 272 268 280 18 chr5 193568357 193568525 -9517007 - MIR SINE MIR -14 248 37 2399 94 7 3 chr5 193568651 193568959 -9516573 - AluSx SINE Alu -3 309 1 1007 291 42 6 chr5 193569069 193569427 -9516105 - L1ME3 LINE L1 0 6162 5792 560 241 42 41 chr5 193570158 193570361 -9515171 - MIR SINE MIR -35 227 20 205 286 40 63 chr5 193570452 193570578 -9514954 + L2 LINE L2 3150 3272 0 243 247 0 0 chr5 193570593 193570666 -9514866 + (ATG)n Simple_repeat Simple_repeat 1 73 0 444 291 143 5 chr5 193571423 193571612 -9513920 - MIR SINE MIR -11 251 37 544 246 141 41 chr5 193571704 193571919 -9513613 - MIR SINE MIR 0 262 27 3048 146 18 6 chr5 193571941 193572488 -9513044 + L1MC1 LINE L1 5779 6332 -1 239 211 268 0 chr5 193573484 193573607 -9511925 - MER117 DNA MER1_type -35 162 7 372 303 41 0 chr5 193573740 193573885 -9511647 + MER102b DNA MER1_type 4 154 -187 309 263 0 0 chr5 193573940 193574020 -9511512 + MER102b DNA MER1_type 246 325 -16 197 289 72 24 chr5 193574552 193574635 -9510897 - L2 LINE L2 -47 3225 3139 202 301 18 97 chr5 193574728 193574841 -9510691 - L2 LINE L2 -162 3110 3007 1090 274 89 13 chr5 193574859 193575253 -9510279 + L2 LINE L2 2863 3286 -27 205 336 27 41 chr5 193575869 193576015 -9509517 + MIR SINE MIR 108 251 -11 2262 132 0 0 chr5 193576135 193576446 -9509086 + AluSq SINE Alu 1 311 -2 504 302 94 14 chr5 193577245 193577457 -9508075 + MIR SINE MIR 27 255 -7 219 232 58 126 chr5 193577565 193577685 -9507847 - MER5A DNA MER1_type -12 177 73 2315 88 3 7 chr5 193577685 193577980 -9507552 - AluSx SINE Alu -18 294 1 219 232 58 126 chr5 193577980 193578049 -9507483 - MER5A DNA MER1_type -116 73 1 497 291 230 17 chr5 193578054 193578243 -9507289 - L2 LINE L2 -1 3312 3165 1918 142 26 7 chr5 193578243 193578546 -9506986 + AluJb SINE Alu 1 309 -3 497 291 230 17 chr5 193578546 193578652 -9506880 - L2 LINE L2 -148 3165 2954 309 254 84 95 chr5 193578745 193579137 -9506395 - MLT1L LTR MaLR -10 605 110 1456 180 103 0 chr5 193579203 193579464 -9506068 - AluJo SINE Alu -24 288 1 491 220 148 11 chr5 193579470 193579652 -9505880 - L1MC5 LINE L1 -493 7468 7262 732 223 29 94 chr5 193579819 193580160 -9505372 - L1MC5 LINE L1 -739 7222 6904 609 240 7 0 chr5 193580165 193580319 -9505213 - L1MA10 LINE L1 0 6334 6180 445 277 77 0 chr5 193580319 193580474 -9505058 - L1ME2 LINE L1 -154 6010 5844 608 53 0 0 chr5 193580474 193580550 -9504982 + AluSp/q SINE Alu 219 294 -19 555 174 15 38 chr5 193580550 193580682 -9504850 - L1M4 LINE L1 -992 5154 5026 * 1238 198 72 27 chr5 193580671 193581004 -9504528 - L1M4 LINE L1 -1394 4752 4405 279 0 0 0 chr5 193581007 193581038 -9504494 + (TG)n Simple_repeat Simple_repeat 2 32 0 850 87 0 0 chr5 193581055 193581159 -9504373 - AluSp/q SINE Alu -12 301 198 386 333 149 0 chr5 193581185 193581407 -9504125 - L1MC4a LINE L1 -1884 5924 5670 181 398 48 0 chr5 193582026 193582129 -9503403 + MIR SINE MIR 135 242 -20 21 0 0 0 chr5 193582167 193582188 -9503344 + AT_rich Low_complexity Low_complexity 1 21 0 732 223 109 5 chr5 193583378 193583562 -9501970 - MER20 DNA MER1_type 0 219 17 1706 126 0 13 chr5 193583612 193583881 -9501651 - AluSx SINE Alu 0 317 52 1973 144 6 6 chr5 193583908 193584220 -9501312 - AluJb SINE Alu 0 312 1 295 313 12 0 chr5 193584263 193584346 -9501186 + MIR3 SINE MIR 93 176 -32 1120 84 39 0 chr5 193584561 193584716 -9500816 + AluSp SINE Alu 1 161 -152 1754 195 0 16 chr5 193584969 193585272 -9500260 + AluJo SINE Alu 1 298 -14 2408 92 3 3 chr5 193585273 193585579 -9499953 + AluSq SINE Alu 1 306 -7 359 316 101 0 chr5 193585771 193585910 -9499622 + MIR SINE MIR 10 162 -100 1128 153 19 15 chr5 193585931 193586198 -9499334 + L1MB7 LINE L1 5504 5909 -275 1707 220 90 84 chr5 193586341 193587030 -9498502 + LTR28 LTR ERV1 356 633 -3 2366 90 3 0 chr5 193587085 193587375 -9498157 - AluY SINE Alu -20 291 1 2085 109 11 3 chr5 193587376 193587683 -9497849 - AluSx SINE Alu 0 312 1 533 267 51 104 chr5 193587794 193588168 -9497364 - L2 LINE L2 -771 2543 2190 421 310 108 10 chr5 193588218 193588421 -9497111 - L2 LINE L2 -1379 1935 1713 349 285 53 40 chr5 193588425 193588576 -9496956 + Charlie8 DNA MER1_type 119 271 -2146 1202 105 19 72 chr5 193588842 193589051 -9496481 + MER20 DNA MER1_type 22 219 0 275 260 281 0 chr5 193589053 193589149 -9496383 + L2 LINE L2 3191 3313 0 972 108 0 8 chr5 193589495 193589625 -9495907 + FLAM_C SINE Alu 5 133 -10 24 53 0 0 chr5 193589653 193589691 -9495841 + AT_rich Low_complexity Low_complexity 1 38 0 2312 92 3 0 chr5 193590651 193590946 -9494586 + AluY SINE Alu 2 297 -14 613 316 75 26 chr5 193590964 193591343 -9494189 - L2 LINE L2 -717 2597 2195 524 139 194 73 chr5 193591343 193591508 -9494024 + MER5A DNA MER1_type 5 189 0 613 316 75 26 chr5 193591508 193591543 -9493989 - L2 LINE L2 -1119 2195 2163 625 200 0 0 chr5 193591586 193591706 -9493826 + Charlie4 DNA MER1_type 26 145 -1816 1430 186 59 54 chr5 193591872 193592260 -9493272 - MLT1B LTR MaLR 0 390 1 230 357 52 13 chr5 193592296 193592450 -9493082 + L2 LINE L2 2376 2535 -779 2171 110 16 13 chr5 193592561 193592871 -9492661 - AluSq SINE Alu -2 311 1 241 293 53 0 chr5 193593089 193593164 -9492368 - MIR SINE MIR -141 121 43 190 289 132 18 chr5 193593313 193593427 -9492105 + MIR SINE MIR 20 146 -116 205 80 0 100 chr5 193593529 193593542 -9491990 + (T)n Simple_repeat Simple_repeat 1 14 -31 1864 166 7 7 chr5 193593542 193593832 -9491700 + AluJb SINE Alu 1 290 -22 205 80 0 100 chr5 193593832 193593852 -9491680 + (T)n Simple_repeat Simple_repeat 14 30 -15 1596 113 133 12 chr5 193593852 193594108 -9491424 + AluSg SINE Alu 1 287 -23 205 80 0 100 chr5 193594108 193594123 -9491409 + (T)n Simple_repeat Simple_repeat 30 45 0 596 198 56 0 chr5 193594238 193594364 -9491168 - FLAM_C SINE Alu 0 133 1 703 178 8 0 chr5 193594879 193594997 -9490535 + AluJb SINE Alu 5 123 -189 449 114 0 14 chr5 193595786 193595856 -9489676 + AluS SINE Alu 2 70 -248 358 153 94 24 chr5 193595884 193595969 -9489563 - L1MEd LINE L1 -5233 886 796 557 213 206 0 chr5 193596061 193596197 -9489335 - L1MEd LINE L1 -5490 629 466 332 339 8 0 chr5 193596195 193596325 -9489207 - L1MEd LINE L1 -5947 172 42 * 650 146 105 0 chr5 193596346 193596517 -9489015 + L1 LINE L1 4639 4827 -1319 416 269 76 0 chr5 193596968 193597087 -9488445 + L2 LINE L2 3186 3313 0 378 239 135 30 chr5 193597220 193597405 -9488127 + MIR SINE MIR 5 219 -43 183 80 0 0 chr5 193597660 193597685 -9487847 + (ATG)n Simple_repeat Simple_repeat 2 26 0 817 185 0 7 chr5 193597690 193597825 -9487707 - FRAM SINE Alu -27 149 16 2278 250 79 42 chr5 193597893 193598227 -9487305 - L1MC4a LINE L1 0 7808 7488 216 0 0 0 chr5 193598227 193598251 -9487281 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2278 250 79 42 chr5 193598251 193598443 -9487089 - L1MC4a LINE L1 -320 7488 7304 1843 130 22 11 chr5 193598443 193598720 -9486812 + AluJb SINE Alu 1 280 -32 2278 250 79 42 chr5 193598720 193598988 -9486544 - L1MC4a LINE L1 -504 7304 7047 1677 163 40 43 chr5 193598988 193599289 -9486243 - AluJo SINE Alu -3 309 10 2278 250 79 42 chr5 193599289 193599722 -9485810 - L1MC4a LINE L1 -761 7047 6442 1871 149 0 35 chr5 193599854 193600170 -9485362 - AluJo SINE Alu 0 312 8 308 313 23 0 chr5 193600305 193600433 -9485099 - MIR3 SINE MIR -27 181 51 483 311 116 0 chr5 193600587 193600777 -9484755 + Charlie8 DNA MER1_type 19 230 -2187 339 363 103 24 chr5 193601013 193601344 -9484188 + L2 LINE L2 2910 3266 -6 841 256 60 17 chr5 193601355 193601589 -9483943 - MIR SINE MIR 0 262 19 520 325 21 11 chr5 193602162 193602350 -9483182 - MIR SINE MIR -55 207 18 443 288 40 8 chr5 193602780 193602905 -9482627 - L2 LINE L2 -1 3312 3184 2124 129 0 0 chr5 193602931 193603218 -9482314 + AluSx SINE Alu 11 297 -15 204 216 0 0 chr5 193603585 193603622 -9481910 + GA-rich Low_complexity Low_complexity 4 40 0 2217 107 3 0 chr5 193603746 193604036 -9481496 + AluSq SINE Alu 1 291 -22 537 175 122 12 chr5 193604170 193604466 -9481066 + L1MD3 LINE L1 6735 7112 -883 1346 157 26 0 chr5 193604466 193604696 -9480836 - MER46A DNA MER2_type 0 236 1 336 218 92 0 chr5 193604704 193604791 -9480741 + MLT1F1 LTR MaLR 37 131 -436 2003 221 87 4 chr5 193604791 193605333 -9480199 + L1MD3 LINE L1 7409 7995 0 189 303 124 0 chr5 193605370 193605459 -9480073 - MIR SINE MIR -62 146 47 307 167 45 0 chr5 193605750 193605816 -9479716 + MIR SINE MIR 68 136 -72 2313 98 0 3 chr5 193606189 193606484 -9479048 - AluSx SINE Alu -18 294 1 529 306 122 14 chr5 193606520 193606808 -9478724 - L1MC4a LINE L1 -1884 5924 5606 198 0 0 0 chr5 193606808 193606830 -9478702 + (T)n Simple_repeat Simple_repeat 1 22 0 309 386 28 0 chr5 193606965 193607110 -9478422 - L2 LINE L2 -3 3269 3121 353 268 9 19 chr5 193607136 193607254 -9478278 + MIR SINE MIR 8 124 -84 371 250 50 0 chr5 193607482 193607582 -9477950 - L2 LINE L2 0 3272 3168 2296 120 0 0 chr5 193607890 193608190 -9477342 - AluSq SINE Alu -12 301 2 336 347 0 0 chr5 193608612 193608714 -9476818 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr5 193608845 193608873 -9476659 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 193608900 193608924 -9476608 + (T)n Simple_repeat Simple_repeat 1 24 0 2463 85 0 0 chr5 193608957 193609262 -9476270 - AluSg SINE Alu -5 305 1 275 340 87 5 chr5 193609422 193609607 -9475925 + MIR SINE MIR 49 248 -14 616 284 35 6 chr5 193609996 193610165 -9475367 - MIR SINE MIR -26 236 63 262 332 81 42 chr5 193610317 193610675 -9474857 - L2 LINE L2 -89 3183 2812 2210 100 38 0 chr5 193610828 193611119 -9474413 + AluSq SINE Alu 1 302 -11 409 267 92 0 chr5 193611347 193611478 -9474054 - Charlie8 DNA MER1_type -2273 144 2 2263 114 0 0 chr5 193611914 193612212 -9473320 + AluSx SINE Alu 1 298 -14 401 216 133 17 chr5 193613022 193613196 -9472336 - MIR SINE MIR -58 204 8 440 303 61 30 chr5 193613346 193613511 -9472021 + MIR3 SINE MIR 17 186 -22 278 227 57 21 chr5 193613901 193614042 -9471490 - L2 LINE L2 -314 2958 2813 2172 113 13 16 chr5 193614076 193614386 -9471146 - AluSx SINE Alu -3 309 1 2023 143 3 13 chr5 193615192 193615499 -9470033 + AluJo SINE Alu 1 304 -8 1866 143 26 13 chr5 193616359 193616666 -9468866 - AluJo SINE Alu 0 312 2 340 305 109 17 chr5 193616671 193616845 -9468687 - MIR SINE MIR -51 211 22 258 318 39 16 chr5 193618219 193618348 -9467184 + MIR SINE MIR 20 151 -111 685 231 65 23 chr5 193618399 193618615 -9466917 - MIR SINE MIR -1 261 37 327 145 0 0 chr5 193618728 193618797 -9466735 + (CA)n Simple_repeat Simple_repeat 1 69 0 214 290 32 0 chr5 193618865 193618927 -9466605 + CT-rich Low_complexity Low_complexity 5 68 0 829 221 53 22 chr5 193618933 193619159 -9466373 - L1ME3 LINE L1 0 6162 5930 472 213 0 9 chr5 193619172 193619280 -9466252 - MIR SINE MIR -116 146 40 4475 108 26 7 chr5 193620176 193620858 -9464674 - LTR17 LTR ERV1 -85 695 1 246 298 43 0 chr5 193621070 193621164 -9464368 + MIR SINE MIR 48 145 -117 215 294 88 0 chr5 193622197 193622265 -9463267 - MIR SINE MIR -183 79 6 2232 93 34 0 chr5 193622308 193622599 -9462933 - AluSq SINE Alu -12 301 1 1021 252 81 48 chr5 193623170 193623590 -9461942 - LTR16A1 LTR ERVL -23 434 1 2600 75 0 3 chr5 193623657 193623965 -9461567 - AluSx SINE Alu -5 307 1 417 306 68 0 chr5 193623997 193624146 -9461386 + MIR SINE MIR 32 190 -72 287 291 211 30 chr5 193624708 193624907 -9460625 - L1ME4a LINE L1 -6 6115 5881 625 268 104 36 chr5 193625373 193625532 -9460000 + MIR SINE MIR 7 187 -75 2146 95 0 3 chr5 193625532 193625827 -9459705 - AluSg SINE Alu -16 294 1 625 268 104 36 chr5 193625827 193625887 -9459645 + MIR SINE MIR 187 241 -21 378 241 248 15 chr5 193625862 193625899 -9459633 - MIR SINE MIR -20 242 215 * 2072 116 7 3 chr5 193625899 193626209 -9459323 - AluSq SINE Alu -2 311 1 378 241 248 15 chr5 193626209 193626308 -9459224 - MIR SINE MIR -47 215 74 336 262 61 61 chr5 193626549 193626713 -9458819 - L1ME4a LINE L1 -232 5889 5726 218 146 0 83 chr5 193626879 193626927 -9458605 - MIR SINE MIR -59 149 106 * 219 231 51 68 chr5 193626909 193627026 -9458506 + L2 LINE L2 3158 3272 0 2458 43 0 13 chr5 193627095 193627396 -9458136 + AluY SINE Alu 1 297 -14 1631 160 28 3 chr5 193627402 193627689 -9457843 + AluJb SINE Alu 1 294 -18 207 0 0 0 chr5 193627758 193627781 -9457751 + (T)n Simple_repeat Simple_repeat 1 23 0 1890 130 7 13 chr5 193627894 193628195 -9457337 + AluSx SINE Alu 1 299 -13 244 237 0 31 chr5 193628572 193628669 -9456863 + CT-rich Low_complexity Low_complexity 4 97 0 190 260 40 0 chr5 193628953 193629003 -9456529 - MIR SINE MIR -97 111 60 1798 97 0 4 chr5 193629667 193629915 -9455617 - AluSx SINE Alu -12 300 54 428 296 174 14 chr5 193630415 193630760 -9454772 + L2 LINE L2 2883 3282 -31 733 262 38 4 chr5 193630821 193631041 -9454491 + MIR SINE MIR 30 254 -8 207 0 0 0 chr5 193631230 193631241 -9454291 + (TG)n Simple_repeat Simple_repeat 1 34 0 207 0 0 0 chr5 193631241 193631264 -9454268 + (TG)n Simple_repeat Simple_repeat 2 24 0 212 97 32 0 chr5 193631306 193631337 -9454195 + MER5A DNA MER1_type 59 90 -99 490 196 39 0 chr5 193631349 193631451 -9454081 + L1MC5 LINE L1 7809 7914 -47 567 291 11 0 chr5 193631599 193631788 -9453744 + L1ME LINE L1 5575 5765 -356 462 236 113 0 chr5 193631840 193631946 -9453586 - L2 LINE L2 -3 3310 3193 2211 81 0 7 chr5 193631997 193632294 -9453238 + AluSg SINE Alu 1 295 -15 1684 169 10 7 chr5 193632483 193632784 -9452748 + AluJo SINE Alu 2 303 -9 861 241 42 16 chr5 193633206 193633397 -9452135 + MIR SINE MIR 15 210 -52 1625 174 7 7 chr5 193633814 193634108 -9451424 - AluJb SINE Alu -16 296 3 2051 76 7 43 chr5 193634627 193634930 -9450602 + AluY SINE Alu 1 292 -19 2427 57 0 16 chr5 193634932 193635248 -9450284 + AluY SINE Alu 1 311 0 363 264 81 101 chr5 193636688 193636806 -9448726 + MIR SINE MIR 2 121 -141 2010 112 3 7 chr5 193636806 193637114 -9448418 + AluSx SINE Alu 1 307 0 363 264 81 101 chr5 193637114 193637252 -9448280 + MIR SINE MIR 121 254 -8 1697 195 22 34 chr5 193637540 193637675 -9447857 - Charlie1 DNA MER1_type -2 2759 2624 1363 197 36 4 chr5 193637675 193637982 -9447550 - AluJo SINE Alu 0 316 1 1697 195 22 34 chr5 193637982 193638261 -9447271 - Charlie1 DNA MER1_type -137 2624 2349 1922 136 0 0 chr5 193638273 193638722 -9446810 + AluSg SINE Alu 1 449 0 244 132 0 26 chr5 193638736 193638774 -9446758 - Charlie1 DNA MER1_type -2711 50 14 2418 53 0 0 chr5 193639024 193639326 -9446206 + AluY SINE Alu 1 302 -9 2141 101 3 35 chr5 193639341 193639659 -9445873 + AluSq SINE Alu 1 308 -5 1844 107 21 7 chr5 193639786 193640067 -9445465 + L1MB2 LINE L1 5712 5996 -187 1160 146 5 28 chr5 193640081 193640294 -9445238 - AluJo SINE Alu -5 307 100 1849 126 41 3 chr5 193640341 193640634 -9444898 + AluSx SINE Alu 1 304 -8 244 148 37 0 chr5 193640634 193640688 -9444844 + L1MB2 LINE L1 6113 6168 -3 1471 182 55 0 chr5 193640703 193640811 -9444721 + AluJo SINE Alu 9 110 -202 432 82 0 0 chr5 193640811 193640872 -9444660 + (CA)n Simple_repeat Simple_repeat 2 62 0 1471 182 55 0 chr5 193640872 193641038 -9444494 + AluJo SINE Alu 110 298 -14 1918 124 6 25 chr5 193641040 193641354 -9444178 + AluSx SINE Alu 1 308 -4 432 0 0 0 chr5 193641359 193641407 -9444125 + (GGAA)n Simple_repeat Simple_repeat 4 51 0 232 276 142 52 chr5 193641469 193641603 -9443929 - L2 LINE L2 -4 3309 3164 282 250 75 38 chr5 193641767 193641847 -9443685 - L3 LINE CR1 -2 1575 1493 1716 145 10 3 chr5 193642086 193642383 -9443149 + AluJo SINE Alu 7 305 -7 1822 126 30 13 chr5 193642398 193642699 -9442833 - AluSx SINE Alu 0 312 7 212 295 90 39 chr5 193643549 193643705 -9441827 - L2 LINE L2 -223 3049 2886 2332 87 3 0 chr5 193644042 193644353 -9441179 - AluSx SINE Alu 0 312 1 261 266 0 76 chr5 193645760 193645839 -9439693 + L2 LINE L2 3237 3309 -4 2589 32 3 0 chr5 193645874 193646182 -9439350 + AluY SINE Alu 1 309 -2 21 0 0 0 chr5 193646256 193646277 -9439255 + AT_rich Low_complexity Low_complexity 1 21 0 3109 109 77 18 chr5 193646713 193647261 -9438271 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1324 168 58 48 chr5 193647262 193647554 -9437978 + AluJo SINE Alu 1 295 -7 2248 88 0 0 chr5 193647678 193647998 -9437534 - AluSc SINE Alu 0 309 1 2175 106 3 0 chr5 193648195 193648496 -9437036 - AluSq SINE Alu -11 302 1 817 87 69 52 chr5 193648603 193648630 -9436902 - Tigger3(Golem) DNA MER2_type -572 2456 2431 1477 170 7 10 chr5 193648630 193648918 -9436614 - AluJo SINE Alu -18 294 8 817 87 69 52 chr5 193648918 193649063 -9436469 - Tigger3(Golem) DNA MER2_type -597 2431 2281 613 150 0 10 chr5 193649060 193649160 -9436372 - Tigger3(Golem) DNA MER2_type -2921 108 10 * 263 254 32 0 chr5 193649311 193649374 -9436158 + MIR SINE MIR 84 148 -114 1688 149 7 0 chr5 193649612 193649887 -9435645 - AluSx SINE Alu -21 291 15 1350 186 35 28 chr5 193649973 193650263 -9435269 + AluJo SINE Alu 1 292 -20 2017 125 0 3 chr5 193650443 193650740 -9434792 - AluSx SINE Alu -16 296 1 1314 178 33 53 chr5 193650745 193651049 -9434483 - AluJo SINE Alu -14 298 1 39 22 0 0 chr5 193651403 193651449 -9434083 + AT_rich Low_complexity Low_complexity 1 46 0 2256 99 7 0 chr5 193651459 193651762 -9433770 + AluSx SINE Alu 1 305 -7 501 175 186 0 chr5 193651762 193651859 -9433673 - AluJo/FLAM SINE Alu -184 118 4 216 0 0 0 chr5 193651862 193651886 -9433646 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 749 200 14 7 chr5 193651888 193652033 -9433499 - FRAM SINE Alu -35 141 1 452 260 125 15 chr5 193652047 193652247 -9433285 - L1MC4 LINE L1 -12 8030 7809 21 0 0 0 chr5 193652628 193652649 -9432883 + AT_rich Low_complexity Low_complexity 1 21 0 531 243 129 24 chr5 193652668 193652878 -9432654 + L2 LINE L2 2534 2765 -549 2577 32 0 3 chr5 193652879 193653263 -9432269 - AluY SINE Alu 0 383 1 1022 231 129 78 chr5 193653264 193653700 -9431832 + L2 LINE L2 2748 3219 -94 2246 97 0 7 chr5 193653700 193654010 -9431522 - AluSg SINE Alu -2 308 1 1022 231 129 78 chr5 193654010 193654111 -9431421 + L2 LINE L2 3219 3313 0 1945 133 11 0 chr5 193654146 193654431 -9431101 + AluSx SINE Alu 8 295 -17 1491 158 13 53 chr5 193654485 193654788 -9430744 + AluJo SINE Alu 1 291 -21 1922 137 7 0 chr5 193656019 193656311 -9429221 - AluSx SINE Alu -16 296 3 1721 149 25 4 chr5 193656544 193656825 -9428707 - AluJo SINE Alu -25 287 1 2178 81 0 14 chr5 193657189 193657486 -9428046 + AluSg SINE Alu 1 293 -17 243 0 0 0 chr5 193657486 193657513 -9428019 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1209 155 10 0 chr5 193658628 193658835 -9426697 + AluSg/x SINE Alu 101 309 -1 649 194 0 31 chr5 193658868 193658997 -9426535 + FLAM_A SINE Alu 8 132 -10 2170 91 7 13 chr5 193659039 193659346 -9426186 - AluSx SINE Alu -7 305 1 2265 88 0 0 chr5 193659348 193659644 -9425888 - AluSg SINE Alu -14 296 1 239 258 65 0 chr5 193659727 193659789 -9425743 - MLT1E1 LTR MaLR -588 66 1 418 308 84 31 chr5 193659927 193660154 -9425378 - MIR SINE MIR -3 259 21 1897 131 22 29 chr5 193660752 193661066 -9424466 - AluJo SINE Alu 0 312 1 484 238 105 37 chr5 193661092 193661261 -9424271 + MIR3 SINE MIR 1 197 -11 1626 123 24 0 chr5 193661621 193661872 -9423660 - AluSx SINE Alu -13 299 43 221 244 0 0 chr5 193661921 193661962 -9423570 + (TG)n Simple_repeat Simple_repeat 2 42 0 4803 157 23 62 chr5 193661967 193662053 -9423479 + L1MA4A LINE L1 4929 5017 -1286 2111 102 7 10 chr5 193662053 193662356 -9423176 + AluSp SINE Alu 1 302 -11 4803 157 23 62 chr5 193662356 193662473 -9423059 + L1MA4A LINE L1 5017 5137 -1166 1814 146 0 32 chr5 193662473 193662781 -9422751 + AluJb SINE Alu 1 298 -14 4803 157 23 62 chr5 193662781 193662876 -9422656 + L1MA4A LINE L1 5137 5234 -1069 2533 43 0 0 chr5 193662876 193663177 -9422355 + AluY SINE Alu 1 301 -10 4803 157 23 62 chr5 193663177 193663454 -9422078 + L1MA4A LINE L1 5234 5520 -783 1892 138 9 31 chr5 193663454 193663772 -9421760 + AluSx SINE Alu 1 311 -1 4803 157 23 62 chr5 193663772 193664550 -9420982 + L1MA4A LINE L1 5520 6222 -81 246 287 23 46 chr5 193664748 193664835 -9420697 + MIR SINE MIR 46 130 -78 4496 179 46 30 chr5 193664870 193665322 -9420210 + MER21B LTR ERV1 1 475 -388 1920 121 18 0 chr5 193665322 193665604 -9419928 - AluSx SINE Alu -23 289 3 4496 179 46 30 chr5 193665604 193665999 -9419533 + MER21B LTR ERV1 475 862 -1 314 206 0 16 chr5 193666013 193666076 -9419456 - MER5B DNA MER1_type -115 63 2 2285 87 0 0 chr5 193666835 193667134 -9418398 + AluSq SINE Alu 2 300 -13 2318 100 0 0 chr5 193667143 193667453 -9418079 + AluSg SINE Alu 1 310 0 2679 128 26 19 chr5 193667620 193668042 -9417490 - Tigger2 DNA MER2_type 0 2718 2294 230 224 61 0 chr5 193668055 193668104 -9417428 - Tigger2 DNA MER2_type -2666 52 1 394 231 340 20 chr5 193668164 193668367 -9417165 + L2 LINE L2 3045 3312 -1 1454 191 34 7 chr5 193668537 193668830 -9416702 - AluJo SINE Alu -11 301 1 2220 72 3 0 chr5 193668856 193669149 -9416383 + AluY SINE Alu 1 294 -17 2351 140 59 27 chr5 193670561 193670835 -9414697 - MSTB LTR MaLR -7 419 126 2321 111 39 28 chr5 193670835 193671195 -9414337 - THE1B LTR MaLR 0 364 1 2351 140 59 27 chr5 193671195 193671326 -9414206 - MSTB LTR MaLR -300 126 1 2054 75 46 0 chr5 193671349 193671630 -9413902 + AluY SINE Alu 1 294 -17 240 272 59 47 chr5 193671790 193671959 -9413573 - L1MC4a LINE L1 -393 7415 7245 1269 178 22 87 chr5 193672058 193672379 -9413153 - AluJb SINE Alu -1 301 2 1324 194 34 14 chr5 193672446 193672739 -9412793 - AluJo SINE Alu -13 299 1 1914 135 0 7 chr5 193672766 193673075 -9412457 - AluSx SINE Alu 0 310 4 231 165 0 129 chr5 193673077 193673146 -9412386 - L1MC5 LINE L1 -792 7169 7111 1747 160 0 13 chr5 193673146 193673453 -9412079 + AluJb SINE Alu 2 304 -8 231 165 0 129 chr5 193673453 193673468 -9412064 - L1MC5 LINE L1 -850 7111 7096 1906 88 3 35 chr5 193673504 193673822 -9411710 + AluY SINE Alu 1 308 -3 34 0 0 0 chr5 193673922 193673956 -9411576 + AT_rich Low_complexity Low_complexity 1 34 0 190 0 67 0 chr5 193673975 193674005 -9411527 + (TTG)n Simple_repeat Simple_repeat 2 33 0 488 203 43 183 chr5 193674014 193674424 -9411108 - L1MD3 LINE L1 -1057 6938 6535 2368 81 3 0 chr5 193674429 193674737 -9410795 - AluSg SINE Alu 0 310 2 2000 141 10 0 chr5 193674738 193675042 -9410490 - AluSx SINE Alu -5 307 1 1743 127 68 10 chr5 193675102 193675394 -9410138 - AluJb SINE Alu -2 310 2 543 261 8 0 chr5 193675479 193675598 -9409934 + FLAM_A SINE Alu 5 124 -9 1679 178 10 0 chr5 193675600 193675893 -9409639 - AluJo SINE Alu -16 296 1 341 257 133 19 chr5 193675958 193676063 -9409469 - L1MC4a LINE L1 -1594 6214 6098 460 280 33 40 chr5 193676064 193676491 -9409041 - L1MC4a LINE L1 -1810 5998 5524 2429 58 0 10 chr5 193676492 193676800 -9408732 + AluY SINE Alu 1 305 -6 1404 136 5 0 chr5 193676810 193677023 -9408509 + AluSx SINE Alu 1 214 -98 216 267 251 46 chr5 193678342 193678537 -9406995 - MIR SINE MIR -22 240 6 2094 96 34 0 chr5 193678578 193678871 -9406661 - AluSq SINE Alu -10 303 1 1080 252 81 48 chr5 193679442 193679862 -9405670 - LTR16A1 LTR ERVL -23 434 1 2452 75 0 3 chr5 193679929 193680237 -9405295 - AluSx SINE Alu -5 307 1 413 309 67 0 chr5 193680269 193680418 -9405114 + MIR SINE MIR 32 190 -72 311 291 211 30 chr5 193680980 193681179 -9404353 - L1ME4a LINE L1 -6 6115 5881 601 268 104 36 chr5 193681645 193681804 -9403728 + MIR SINE MIR 7 187 -75 2170 95 0 3 chr5 193681804 193682099 -9403433 - AluSg SINE Alu -16 294 1 601 268 104 36 chr5 193682099 193682159 -9403373 + MIR SINE MIR 187 241 -21 337 164 259 52 chr5 193682151 193682169 -9403363 - MIR SINE MIR -49 213 200 * 2091 122 6 3 chr5 193682169 193682481 -9403051 - AluSq SINE Alu 0 313 1 337 164 259 52 chr5 193682481 193682578 -9402954 - MIR SINE MIR -62 200 74 252 358 67 12 chr5 193682665 193682830 -9402702 - L1ME4a LINE L1 -2037 5771 5598 232 262 61 61 chr5 193682819 193682983 -9402549 - L1ME LINE L1 -232 5889 5726 * 212 146 0 83 chr5 193683149 193683197 -9402335 - MIR SINE MIR -59 149 106 209 268 103 21 chr5 193683199 193683296 -9402236 + L2 LINE L2 3168 3272 0 2017 142 0 0 chr5 193683365 193683676 -9401856 + AluSx SINE Alu 1 311 -1 483 273 29 77 chr5 193683689 193683898 -9401634 - MIR SINE MIR -1 261 63 385 249 130 50 chr5 193684516 193684677 -9400855 + MIR SINE MIR 30 200 -62 359 224 199 51 chr5 193684678 193684874 -9400658 - L2 LINE L2 0 3313 3089 443 227 142 0 chr5 193685017 193685158 -9400374 - MIR SINE MIR -24 238 78 621 272 168 4 chr5 193685286 193685518 -9400014 + Charlie8 DNA MER1_type 3 272 -2145 320 275 163 25 chr5 193685558 193685718 -9399814 - MLT1H1 LTR MaLR -311 244 63 646 307 166 24 chr5 193685807 193685890 -9399642 - L2 LINE L2 -534 2780 2710 909 205 67 5 chr5 193685890 193686085 -9399447 - MER3 DNA MER1_type 0 209 3 646 307 166 24 chr5 193686085 193686108 -9399424 - L2 LINE L2 -604 2710 2692 2280 72 0 26 chr5 193686108 193686413 -9399119 + AluY SINE Alu 1 297 -14 646 307 166 24 chr5 193686413 193686810 -9398722 - L2 LINE L2 -622 2692 2192 600 152 194 73 chr5 193686810 193686975 -9398557 + MER5A DNA MER1_type 5 189 0 646 307 166 24 chr5 193686975 193687010 -9398522 - L2 LINE L2 -1122 2192 2163 1549 185 70 86 chr5 193687053 193687299 -9398233 + Charlie4a DNA MER1_type 26 262 -1699 1484 158 49 8 chr5 193687299 193687565 -9397967 + AluJb SINE Alu 1 277 -35 1549 185 70 86 chr5 193687565 193687805 -9397727 + Charlie4a DNA MER1_type 262 504 -4 203 270 43 43 chr5 193687813 193687928 -9397604 - L2 LINE L2 -1155 2159 2045 193 291 112 22 chr5 193688042 193688176 -9397356 - L2 LINE L2 -1647 1667 1522 236 346 69 20 chr5 193688439 193688641 -9396891 - L2 LINE L2 -22 3291 3080 518 167 98 38 chr5 193688956 193689088 -9396444 + MIR SINE MIR 31 170 -92 416 219 142 58 chr5 193689287 193689494 -9396038 - MIR SINE MIR -7 255 21 441 288 103 0 chr5 193690515 193690661 -9394871 - MIR SINE MIR -54 208 48 259 286 42 121 chr5 193691099 193691455 -9394077 + L2 LINE L2 2817 3144 -128 318 239 80 0 chr5 193691615 193691703 -9393829 + MIR3 SINE MIR 68 162 -46 267 196 0 0 chr5 193691737 193691783 -9393749 - L2 LINE L2 0 3272 3227 914 304 85 14 chr5 193691979 193692486 -9393046 - L2 LINE L2 -340 2974 2432 189 0 0 0 chr5 193692486 193692507 -9393025 + (GGA)n Simple_repeat Simple_repeat 3 23 0 180 0 0 0 chr5 193692546 193692566 -9392966 + (GGA)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr5 193692605 193692625 -9392907 + (GGA)n Simple_repeat Simple_repeat 1 20 0 209 273 20 50 chr5 193692629 193692728 -9392804 - L2 LINE L2 -799 2515 2420 246 62 0 0 chr5 193692771 193692803 -9392729 + (GGA)n Simple_repeat Simple_repeat 1 32 0 433 313 67 29 chr5 193693125 193693333 -9392199 - MIR SINE MIR -19 243 28 233 336 47 0 chr5 193693601 193693708 -9391824 - L2 LINE L2 -211 3061 2950 452 285 139 0 chr5 193694230 193694367 -9391165 - L2 LINE L2 0 3272 3117 2159 122 3 0 chr5 193694369 193694680 -9390852 + AluSx SINE Alu 1 312 0 210 287 83 38 chr5 193695017 193695174 -9390358 + L2 LINE L2 2886 3049 -223 347 300 173 10 chr5 193695522 193695725 -9389807 + MIR SINE MIR 9 241 -21 302 303 37 18 chr5 193696636 193696745 -9388787 + L1M4 LINE L1 3074 3184 -2962 1848 88 32 0 chr5 193696846 193697096 -9388436 - AluSx SINE Alu -54 258 1 308 318 91 15 chr5 193697215 193697347 -9388185 + MER5A DNA MER1_type 47 188 -1 343 296 68 8 chr5 193697831 193697963 -9387569 - L2 LINE L2 -1 3271 3132 2376 80 0 0 chr5 193698311 193698612 -9386920 - AluSx SINE Alu -11 301 1 245 280 0 0 chr5 193698636 193698711 -9386821 - L1MC/D LINE L1 -2052 5756 5682 440 290 131 23 chr5 193699768 193699989 -9385543 - MIR SINE MIR -4 258 14 506 222 35 45 chr5 193700160 193700312 -9385220 + MIR SINE MIR 5 151 -62 302 360 16 0 chr5 193700734 193700859 -9384673 - MIR3 SINE MIR -6 202 76 285 336 50 60 chr5 193701016 193701299 -9384233 + L2 LINE L2 2993 3272 0 181 222 67 0 chr5 193702448 193702493 -9383039 - MIR SINE MIR -114 148 101 691 268 114 21 chr5 193702649 193703024 -9382508 - MLT1K LTR MaLR -100 488 17 1641 181 3 7 chr5 193703173 193703465 -9382067 + AluJo SINE Alu 5 295 -17 353 286 81 52 chr5 193703549 193703837 -9381695 + L1ME LINE L1 5140 5418 -744 1604 186 10 16 chr5 193703837 193704144 -9381388 + AluJb SINE Alu 1 305 -7 353 286 81 52 chr5 193704144 193704188 -9381344 + L1ME LINE L1 5418 5459 -703 1969 113 21 0 chr5 193704188 193704471 -9381061 + AluSx SINE Alu 14 302 -10 353 286 81 52 chr5 193704471 193704565 -9380967 + L1ME LINE L1 5459 5570 -592 2121 117 3 3 chr5 193704924 193705233 -9380299 + AluSx SINE Alu 1 309 -3 2187 109 0 3 chr5 193705235 193705538 -9379994 + AluSg SINE Alu 1 302 -8 304 343 82 0 chr5 193705570 193705716 -9379816 - L2 LINE L2 -1 3271 3114 243 306 104 42 chr5 193706852 193707045 -9378487 - MARNA DNA Mariner -83 503 299 210 284 45 15 chr5 193707347 193707414 -9378118 + L2 LINE L2 3187 3255 -17 1431 123 142 22 chr5 193707451 193707719 -9377813 + AluSx SINE Alu 1 300 -12 656 263 93 5 chr5 193707769 193707963 -9377569 - MIR SINE MIR -4 258 48 2179 84 37 0 chr5 193708379 193708678 -9376854 + AluSg SINE Alu 1 310 0 390 273 74 27 chr5 193709445 193709682 -9375850 + MIR SINE MIR 3 259 -3 363 239 115 9 chr5 193710081 193710194 -9375338 - MIR SINE MIR -117 145 21 239 346 109 6 chr5 193710769 193710809 -9374723 - MIR SINE MIR -70 192 158 2325 92 0 0 chr5 193710809 193711113 -9374419 - AluSq SINE Alu -9 304 1 239 346 109 6 chr5 193711113 193711228 -9374304 - MIR SINE MIR -104 158 21 182 244 0 0 chr5 193711490 193711531 -9374001 - L2 LINE L2 -1 3271 3231 190 212 0 0 chr5 193712056 193712089 -9373443 - L2 LINE L2 -18 3254 3222 1757 177 3 0 chr5 193712127 193712438 -9373094 - AluSx SINE Alu 0 312 1 258 227 152 0 chr5 193712442 193712508 -9373024 - MIR SINE MIR -116 146 71 1595 142 48 24 chr5 193713332 193713355 -9372177 - AluJo SINE Alu -16 296 275 2143 118 3 3 chr5 193713355 193713661 -9371871 + AluSq SINE Alu 1 306 -7 1595 142 48 24 chr5 193713661 193713926 -9371606 - AluJo SINE Alu -37 275 1 324 0 0 0 chr5 193714331 193714367 -9371165 + (TG)n Simple_repeat Simple_repeat 1 36 0 254 159 48 32 chr5 193715016 193715079 -9370453 + MIR SINE MIR 68 131 -131 1646 157 7 21 chr5 193715230 193715516 -9370016 + AluJo SINE Alu 10 291 -21 572 309 104 5 chr5 193715727 193715947 -9369585 + MIR SINE MIR 18 259 -3 977 165 70 5 chr5 193716034 193716234 -9369298 + MER20 DNA MER1_type 7 219 0 2068 74 50 27 chr5 193716238 193716535 -9368997 + AluY SINE Alu 1 304 -7 253 247 52 31 chr5 193716646 193716743 -9368789 + MIR SINE MIR 54 152 -110 536 221 99 35 chr5 193716766 193716938 -9368594 + MIR SINE MIR 16 198 -64 24 0 0 0 chr5 193716944 193716968 -9368564 + AT_rich Low_complexity Low_complexity 1 24 0 2364 64 0 0 chr5 193719282 193719577 -9365955 + AluY SINE Alu 1 295 -16 2250 99 0 6 chr5 193719591 193719905 -9365627 + AluSx SINE Alu 1 312 0 467 268 24 0 chr5 193719956 193720083 -9365449 + MIR SINE MIR 59 188 -74 1469 147 39 55 chr5 193720741 193721048 -9364484 + AluJb SINE Alu 1 302 -10 261 238 0 16 chr5 193721048 193721111 -9364421 + GA-rich Low_complexity Low_complexity 3 64 0 305 63 89 89 chr5 193721585 193721664 -9363868 - Alu SINE Alu 0 301 223 1578 143 49 24 chr5 193723678 193723699 -9361833 - AluJo SINE Alu -18 294 275 2135 118 3 3 chr5 193723699 193724004 -9361528 + AluSq SINE Alu 1 305 -8 1578 143 49 24 chr5 193724004 193724269 -9361263 - AluJo SINE Alu -37 275 1 306 0 0 0 chr5 193724673 193724707 -9360825 + (TG)n Simple_repeat Simple_repeat 1 34 0 254 159 48 32 chr5 193725356 193725419 -9360113 + MIR SINE MIR 68 131 -131 1676 150 7 21 chr5 193725570 193725856 -9359676 + AluJo SINE Alu 10 291 -21 572 309 104 5 chr5 193726067 193726287 -9359245 + MIR SINE MIR 18 259 -3 1015 140 80 15 chr5 193726374 193726574 -9358958 + MER20 DNA MER1_type 7 219 0 2059 71 50 27 chr5 193726578 193726875 -9358657 + AluY SINE Alu 1 304 -7 259 233 44 33 chr5 193726986 193727076 -9358456 + MIR SINE MIR 54 144 -118 571 221 99 35 chr5 193727106 193727278 -9358254 + MIR SINE MIR 16 198 -64 24 0 0 0 chr5 193727284 193727308 -9358224 + AT_rich Low_complexity Low_complexity 1 24 0 2321 68 0 0 chr5 193729628 193729923 -9355609 + AluY SINE Alu 1 295 -16 2227 99 0 6 chr5 193729937 193730251 -9355281 + AluSx SINE Alu 1 312 0 480 259 17 0 chr5 193730302 193730418 -9355114 + MIR SINE MIR 59 176 -86 1436 136 40 57 chr5 193731087 193731388 -9354144 + AluJb SINE Alu 1 296 -16 209 193 0 18 chr5 193731388 193731445 -9354087 + GA-rich Low_complexity Low_complexity 3 58 0 2234 94 27 0 chr5 193731929 193732227 -9353305 - AluSq SINE Alu -7 306 1 296 286 76 50 chr5 193732581 193732700 -9352832 - MIR SINE MIR -111 151 30 323 214 29 107 chr5 193732899 193733039 -9352493 - L1ME4a LINE L1 -6 6115 5987 406 171 132 26 chr5 193733218 193733340 -9352192 + MIR SINE MIR 107 243 -19 827 239 45 37 chr5 193733379 193733454 -9352078 - MIR SINE MIR -3 259 186 2254 104 0 0 chr5 193733454 193733751 -9351781 + AluSx SINE Alu 1 297 -15 827 239 45 37 chr5 193733751 193733918 -9351614 - MIR SINE MIR -76 186 15 195 42 0 0 chr5 193734121 193734145 -9351387 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 366 229 7 21 chr5 193734310 193734450 -9351082 + (TGAA)n Simple_repeat Simple_repeat 3 140 0 2318 73 3 0 chr5 193734781 193735083 -9350449 + AluSp SINE Alu 1 303 -10 272 49 49 0 chr5 193736705 193736746 -9348786 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 218 226 57 19 chr5 193738447 193738500 -9347032 - MIR3 SINE MIR -53 155 101 792 157 0 15 chr5 193738651 193738785 -9346747 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr5 193738810 193738835 -9346697 + AT_rich Low_complexity Low_complexity 1 25 0 2246 62 0 49 chr5 193738890 193739198 -9346334 - AluY SINE Alu -18 293 1 2123 116 0 3 chr5 193739226 193739536 -9345996 + AluSc SINE Alu 1 309 0 385 233 37 98 chr5 193739580 193739743 -9345789 + LTR41 LTR ERVL 1 153 -620 1039 211 29 0 chr5 193740330 193740539 -9344993 + MLT1E3 LTR MaLR 241 455 -169 863 144 0 15 chr5 193740550 193740682 -9344850 + FLAM_C SINE Alu 1 130 -3 2195 60 0 14 chr5 193741186 193741496 -9344036 - AluY SINE Alu 0 306 1 1761 197 83 28 chr5 193741598 193742246 -9343286 + L1M4 LINE L1 2506 3242 -2904 785 165 8 0 chr5 193742316 193742443 -9343089 + FLAM_C SINE Alu 6 133 -10 1711 193 76 52 chr5 193742454 193742952 -9342580 + L1M4 LINE L1 4430 4939 -1207 191 62 62 0 chr5 193742956 193742988 -9342544 + A-rich Low_complexity Low_complexity 2 35 0 274 296 86 86 chr5 193743125 193743530 -9342002 + L2 LINE L2 99 503 -2811 265 272 48 29 chr5 193743674 193743777 -9341755 + L2 LINE L2 2080 2184 -1130 799 133 7 44 chr5 193743779 193743914 -9341618 - MER20 DNA MER1_type -2 217 88 758 298 188 21 chr5 193743975 193744411 -9341121 + L2 LINE L2 2284 2792 -522 225 257 89 59 chr5 193744415 193744516 -9341016 - L2 LINE L2 -43 3270 3167 656 178 0 17 chr5 193744803 193744921 -9340611 - FLAM_A SINE Alu -26 116 1 782 154 0 0 chr5 193745002 193745119 -9340413 - AluJb SINE Alu -195 117 1 1873 196 118 36 chr5 193745174 193745810 -9339722 + L1MC5 LINE L1 7211 7898 -63 1786 130 4 0 chr5 193745843 193746112 -9339420 + AluSp SINE Alu 37 306 -7 281 57 0 0 chr5 193746179 193746214 -9339318 - Alu SINE Alu -261 42 8 259 105 26 0 chr5 193746623 193746661 -9338871 - AluSp SINE Alu -149 154 116 205 68 182 0 chr5 193746671 193746715 -9338817 + L2 LINE L2 3262 3313 0 2200 104 0 0 chr5 193746824 193747123 -9338409 + AluSx SINE Alu 1 299 -13 1820 151 7 16 chr5 193748199 193748503 -9337029 + AluJo SINE Alu 1 301 -11 1733 146 28 0 chr5 193748680 193748967 -9336565 - AluSg SINE Alu -15 295 1 1923 128 3 16 chr5 193749196 193749502 -9336030 - AluSx SINE Alu -10 302 1 189 0 0 0 chr5 193749615 193749636 -9335896 + (A)n Simple_repeat Simple_repeat 1 21 0 1618 160 28 3 chr5 193749705 193749992 -9335540 - AluJb SINE Alu -18 294 1 2334 60 0 10 chr5 193750001 193750299 -9335233 - AluY SINE Alu -16 295 1 2118 79 0 43 chr5 193750301 193750606 -9334926 - AluY SINE Alu -19 292 1 1625 174 7 7 chr5 193751125 193751419 -9334113 + AluJb SINE Alu 3 296 -16 861 241 42 16 chr5 193751836 193752027 -9333505 - MIR SINE MIR -52 210 15 1684 169 10 7 chr5 193752449 193752750 -9332782 - AluJo SINE Alu -9 303 2 2220 84 3 0 chr5 193752940 193753236 -9332296 - AluSx SINE Alu -15 297 1 257 293 53 0 chr5 193753454 193753529 -9332003 - MIR SINE MIR -141 121 43 226 260 188 10 chr5 193753696 193753792 -9331740 + MIR SINE MIR 34 146 -116 205 80 0 100 chr5 193753894 193753907 -9331625 + (T)n Simple_repeat Simple_repeat 1 14 -31 1711 166 7 7 chr5 193753907 193754197 -9331335 + AluJb SINE Alu 1 290 -22 205 80 0 100 chr5 193754197 193754217 -9331315 + (T)n Simple_repeat Simple_repeat 14 30 -15 1477 113 128 12 chr5 193754217 193754474 -9331058 + AluSg SINE Alu 1 287 -23 205 80 0 100 chr5 193754474 193754489 -9331043 + (T)n Simple_repeat Simple_repeat 30 45 0 626 198 56 0 chr5 193754603 193754729 -9330803 - FLAM_C SINE Alu 0 133 1 736 178 8 0 chr5 193755245 193755363 -9330169 + AluJb SINE Alu 5 123 -189 390 266 70 61 chr5 193756049 193756151 -9329381 + MLT1L LTR MaLR 299 399 -216 2356 83 0 0 chr5 193756151 193756453 -9329079 + AluSc SINE Alu 1 302 -7 390 266 70 61 chr5 193756453 193756564 -9328968 + MLT1L LTR MaLR 399 514 -101 329 230 69 11 chr5 193757000 193757087 -9328445 + L1ME4a LINE L1 5853 5944 -177 1094 190 63 0 chr5 193757088 193757293 -9328239 - MER46A DNA MER2_type -3 233 16 244 189 19 19 chr5 193757299 193757352 -9328180 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 334 195 69 46 chr5 193757353 193757440 -9328092 - L1MC4 LINE L1 -1340 6702 6614 310 252 36 63 chr5 193757393 193757504 -9328028 + L1MC4 LINE L1 6595 6702 -1340 * 312 314 53 58 chr5 193757492 193757680 -9327852 + L1ME4a LINE L1 5935 6121 0 198 0 0 0 chr5 193757767 193757789 -9327743 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 576 312 0 5 chr5 193759165 193759386 -9326146 + AluSc SINE Alu 48 267 -42 260 241 35 0 chr5 193759451 193759509 -9326023 + MLT1L LTR MaLR 430 489 -126 329 230 69 11 chr5 193759966 193760053 -9325479 + L1ME4a LINE L1 5853 5944 -177 1094 190 63 0 chr5 193760054 193760259 -9325273 - MER46A DNA MER2_type -3 233 16 244 189 19 19 chr5 193760265 193760318 -9325214 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 334 195 69 46 chr5 193760319 193760406 -9325126 - L1MC4 LINE L1 -1340 6702 6614 310 252 36 63 chr5 193760359 193760470 -9325062 + L1MC4 LINE L1 6595 6702 -1340 * 312 314 53 58 chr5 193760458 193760646 -9324886 + L1ME4a LINE L1 5935 6121 0 623 124 0 10 chr5 193760733 193760852 -9324680 - AluSg/x SINE Alu 0 304 187 242 234 24 24 chr5 193761515 193761639 -9323893 + (TTGG)n Simple_repeat Simple_repeat 3 126 0 246 217 0 70 chr5 193761728 193761843 -9323689 + (TTGTG)n Simple_repeat Simple_repeat 3 109 0 722 96 0 10 chr5 193762412 193762516 -9323016 + AluSc SINE Alu 189 291 -18 860 144 0 0 chr5 193762772 193762897 -9322635 - FLAM_C SINE Alu -8 125 1 1667 162 0 56 chr5 193762917 193763238 -9322294 + AluJo SINE Alu 1 303 -9 23 0 0 0 chr5 193763238 193763261 -9322271 + AT_rich Low_complexity Low_complexity 1 23 0 761 323 148 45 chr5 193763261 193764175 -9321357 - L2 LINE L2 -756 2558 1508 1883 149 0 7 chr5 193764175 193764477 -9321055 - AluSx SINE Alu -12 300 1 761 323 148 45 chr5 193764477 193764674 -9320858 - L2 LINE L2 -1806 1508 1333 2376 79 0 0 chr5 193764793 193765097 -9320435 + AluSq SINE Alu 1 304 -9 729 148 0 0 chr5 193765105 193765213 -9320319 + FLAM_C SINE Alu 2 109 -34 225 0 0 0 chr5 193765219 193765244 -9320288 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr5 193765249 193765274 -9320258 + AT_rich Low_complexity Low_complexity 1 25 0 373 237 92 72 chr5 193765347 193765499 -9320033 - L2 LINE L2 -1 3312 3158 404 200 148 77 chr5 193765503 193765658 -9319874 + L1ME2 LINE L1 5998 6163 -1 590 278 121 4 chr5 193765733 193765993 -9319539 - L2 LINE L2 -219 3053 2770 2010 100 18 0 chr5 193766003 193766282 -9319250 - AluSx SINE Alu -28 284 1 277 218 271 23 chr5 193766324 193766457 -9319075 + L2 LINE L2 2984 3149 -164 307 119 84 0 chr5 193766464 193766524 -9319008 - L1ME3 LINE L1 -1 6161 6086 2331 86 3 0 chr5 193766538 193766842 -9318690 - AluY SINE Alu -6 305 1 2034 108 0 3 chr5 193766843 193767153 -9318379 - AluSx SINE Alu 0 312 1 593 268 50 103 chr5 193767261 193767638 -9317894 - L2 LINE L2 -768 2546 2190 464 303 111 10 chr5 193767693 193767891 -9317641 - L2 LINE L2 -1384 1930 1713 358 285 53 40 chr5 193767895 193768046 -9317486 + Charlie8 DNA MER1_type 119 271 -2146 1261 105 19 72 chr5 193768312 193768521 -9317011 + MER20 DNA MER1_type 22 219 0 297 260 281 0 chr5 193768523 193768619 -9316913 + L2 LINE L2 3191 3313 0 903 108 0 8 chr5 193768965 193769095 -9316437 + FLAM_C SINE Alu 5 133 -10 24 53 0 0 chr5 193769123 193769161 -9316371 + AT_rich Low_complexity Low_complexity 1 38 0 2482 31 0 0 chr5 193770139 193770433 -9315099 - AluY SINE Alu -13 298 5 211 242 0 32 chr5 193770880 193770942 -9314590 + (TTTCG)n Simple_repeat Simple_repeat 1 60 0 207 214 0 0 chr5 193770943 193771013 -9314519 + T-rich Low_complexity Low_complexity 1 70 0 279 323 31 15 chr5 193771738 193771868 -9313664 + MIR SINE MIR 20 151 -111 748 233 65 19 chr5 193771919 193772134 -9313398 - MIR SINE MIR -1 261 37 255 164 0 0 chr5 193772247 193772308 -9313224 + (CA)n Simple_repeat Simple_repeat 1 61 0 239 274 32 0 chr5 193772376 193772438 -9313094 + CT-rich Low_complexity Low_complexity 5 68 0 863 215 58 22 chr5 193772447 193772670 -9312862 - L1ME3 LINE L1 -2 6160 5930 506 213 0 9 chr5 193772683 193772791 -9312741 - MIR SINE MIR -116 146 40 4675 108 26 7 chr5 193773688 193774370 -9311162 - LTR17 LTR ERV1 -85 695 1 276 292 60 2 chr5 193774548 193774676 -9310856 + MIR SINE MIR 6 146 -62 2267 72 7 0 chr5 193775561 193775854 -9309678 + AluSx SINE Alu 1 295 -17 376 289 236 38 chr5 193775874 193776247 -9309285 + L2 LINE L2 2863 3309 -4 839 231 10 30 chr5 193776335 193776534 -9308998 + MLT1D LTR MaLR 1 195 -310 406 71 0 18 chr5 193776534 193776590 -9308942 + Alu SINE Alu 2 56 -256 305 286 154 23 chr5 193776968 193777143 -9308389 + L1 LINE L1 3029 3226 -2920 253 187 40 53 chr5 193776996 193777146 -9308386 + A-rich Low_complexity Low_complexity 5 152 0 * 22 56 0 0 chr5 193780137 193780173 -9305359 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr5 193780367 193780390 -9305142 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr5 193781304 193781327 -9304205 + (A)n Simple_repeat Simple_repeat 1 23 0 700 151 139 6 chr5 193787160 193787332 -9298200 - AluSq SINE Alu -117 196 2 1946 128 3 31 chr5 193787345 193787513 -9298019 - AluSx SINE Alu 0 301 143 2332 73 0 7 chr5 193787513 193787841 -9297691 - AluY SINE Alu 0 311 1 1946 128 3 31 chr5 193787841 193787981 -9297551 - AluSx SINE Alu -158 143 1 2349 76 0 17 chr5 193788134 193788436 -9297096 + AluY SINE Alu 1 297 -14 1901 146 6 43 chr5 193788460 193788783 -9296749 + AluJb SINE Alu 1 311 -1 2168 122 0 10 chr5 193788832 193789189 -9296343 - AluSx SINE Alu 0 312 1 1831 160 11 3 chr5 193789413 193789700 -9295832 + AluJo SINE Alu 1 289 -23 1398 145 157 8 chr5 193789713 193789961 -9295571 - AluJo SINE Alu -27 285 1 1886 137 10 13 chr5 193790171 193790470 -9295062 + AluJb SINE Alu 15 312 0 361 314 39 19 chr5 193792283 193792439 -9293093 - MIR3 SINE MIR 0 208 50 2360 82 20 0 chr5 193792441 193792734 -9292798 - AluSg SINE Alu -11 299 1 215 210 48 65 chr5 193792811 193792873 -9292659 + MIR SINE MIR 91 151 -57 418 286 71 29 chr5 193793152 193793292 -9292240 + MIR SINE MIR 47 192 -70 2239 99 10 7 chr5 193793456 193793760 -9291772 - AluSq SINE Alu -8 305 1 2091 139 0 0 chr5 193794351 193794486 -9291046 + AluSx SINE Alu 1 135 -177 2451 83 3 0 chr5 193794486 193794787 -9290745 + AluSp SINE Alu 1 302 -11 2091 139 0 0 chr5 193794787 193794952 -9290580 + AluSx SINE Alu 134 301 -11 310 172 0 0 chr5 193795431 193795489 -9290043 + L1ME4a LINE L1 5957 6014 -107 318 140 0 0 chr5 193795499 193795556 -9289976 + L1ME4a LINE L1 6065 6121 0 352 247 56 0 chr5 193796563 193796652 -9288880 - MER5A DNA MER1_type -80 109 16 188 286 16 16 chr5 193796732 193796795 -9288737 - L2 LINE L2 -221 3051 2989 2176 121 0 20 chr5 193796804 193797110 -9288422 + AluSx SINE Alu 4 303 -9 275 321 109 23 chr5 193797147 193797368 -9288164 - L2 LINE L2 -676 2638 2399 1868 193 51 137 chr5 193797397 193797475 -9288057 - LTR8 LTR ERV1 -8 683 600 2374 78 10 0 chr5 193797475 193797769 -9287763 - AluY SINE Alu -14 297 1 1868 193 51 137 chr5 193797769 193797859 -9287673 - LTR8 LTR ERV1 -91 600 504 2185 97 4 0 chr5 193797859 193798170 -9287362 - AluSc SINE Alu 0 312 1 1868 193 51 137 chr5 193798170 193798183 -9287349 - LTR8 LTR ERV1 -187 504 491 2244 62 37 4 chr5 193798183 193798480 -9287052 - AluY SINE Alu 0 306 1 1868 193 51 137 chr5 193798480 193799041 -9286491 - LTR8 LTR ERV1 -200 491 1 337 330 67 22 chr5 193799057 193799327 -9286205 - L2 LINE L2 -953 2361 2080 2310 94 3 7 chr5 193799696 193799994 -9285538 - AluSx SINE Alu -15 297 1 2350 116 0 0 chr5 193799994 193800295 -9285237 - AluSq SINE Alu -10 303 3 464 206 47 0 chr5 193800299 193800406 -9285126 - MIR SINE MIR -37 225 114 931 173 153 22 chr5 193800420 193800689 -9284843 - LTR54 LTR ERV1 0 510 238 1104 43 0 103 chr5 193800689 193800922 -9284610 + AluY SINE Alu 1 209 -102 808 143 55 50 chr5 193801280 193801373 -9284159 - LTR54 LTR ERV1 -327 183 87 2453 72 13 0 chr5 193801373 193801677 -9283855 - AluSp SINE Alu -5 308 1 808 143 55 50 chr5 193801677 193801765 -9283767 - LTR54 LTR ERV1 -423 87 1 202 332 124 22 chr5 193802424 193802698 -9282834 + L2 LINE L2 2964 3265 -7 574 116 5 222 chr5 193802842 193802949 -9282583 + MER45A DNA AcHobo 31 81 -1500 2162 95 0 11 chr5 193802949 193803097 -9282435 - AluSp SINE Alu -32 281 136 2535 69 0 0 chr5 193803097 193803401 -9282131 - AluY SINE Alu -7 304 1 2162 95 0 11 chr5 193803401 193803536 -9281996 - AluSp SINE Alu -177 136 1 574 116 5 222 chr5 193803536 193803617 -9281915 + MER45A DNA AcHobo 81 178 0 1918 107 0 33 chr5 193803806 193804077 -9281455 - AluSg SINE Alu -48 262 1 188 250 0 0 chr5 193804078 193804118 -9281414 - MIR SINE MIR 0 262 223 2480 166 241 48 chr5 193804141 193804833 -9280699 + LTR1B LTR ERV1 1 826 0 2989 158 52 53 chr5 193804833 193805232 -9280300 - LTR26E LTR ERV1 -4 618 220 1937 124 57 0 chr5 193805232 193805515 -9280017 - AluSq SINE Alu -14 299 1 2989 158 52 53 chr5 193805515 193805613 -9279919 - LTR26E LTR ERV1 -402 220 123 2388 98 0 0 chr5 193805613 193805910 -9279622 - AluSx SINE Alu -15 297 1 2989 158 52 53 chr5 193805910 193806030 -9279502 - LTR26E LTR ERV1 -499 123 1 2269 87 3 3 chr5 193806373 193806687 -9278845 - AluSp SINE Alu 0 314 1 1924 144 43 0 chr5 193806688 193806965 -9278567 - AluJo SINE Alu -23 289 1 2028 114 7 10 chr5 193807984 193808283 -9277249 - AluSg SINE Alu -12 298 1 800 160 30 0 chr5 193808285 193808416 -9277116 - AluJb SINE Alu -177 135 1 204 139 329 51 chr5 193808445 193808524 -9277008 - MIR SINE MIR -72 190 90 241 276 78 60 chr5 193808560 193808676 -9276856 + L2 LINE L2 3069 3186 -86 598 137 88 0 chr5 193809291 193809393 -9276139 - HY1 scRNA scRNA -1 111 1 2342 85 0 53 chr5 193809400 193809719 -9275813 - AluSq SINE Alu -11 302 1 217 287 209 12 chr5 193810121 193810273 -9275259 - MIR3 SINE MIR -17 191 17 21 0 0 0 chr5 193810474 193810495 -9275037 + AT_rich Low_complexity Low_complexity 1 21 0 2516 71 0 0 chr5 193810501 193810810 -9274722 + AluY SINE Alu 1 309 -2 650 206 185 16 chr5 193811799 193811983 -9273549 - MIR SINE MIR -2 260 46 242 235 216 10 chr5 193811984 193812086 -9273446 - L2 LINE L2 -4 3268 3146 493 306 44 0 chr5 193812304 193812473 -9273059 + MIR SINE MIR 22 198 -64 30 0 0 0 chr5 193813425 193813455 -9272077 + GC_rich Low_complexity Low_complexity 1 30 0 250 223 21 32 chr5 193813705 193813872 -9271660 + G-rich Low_complexity Low_complexity 1 165 0 2586 43 0 7 chr5 193815318 193815622 -9269910 - AluY SINE Alu -9 302 1 2338 90 3 10 chr5 193815624 193815934 -9269598 - AluSx SINE Alu -4 308 1 2630 61 3 0 chr5 193816084 193816396 -9269136 - AluSq SINE Alu 0 313 1 29 28 0 0 chr5 193817029 193817065 -9268467 + AT_rich Low_complexity Low_complexity 1 36 0 2120 140 0 0 chr5 193817066 193817359 -9268173 - AluSx SINE Alu -15 297 5 669 245 17 56 chr5 193817541 193817774 -9267758 - MER58A DNA MER1_type 0 224 1 2222 113 0 0 chr5 193817797 193818098 -9267434 - AluSg SINE Alu -9 301 1 342 315 94 0 chr5 193819032 193819181 -9266351 + L2 LINE L2 3110 3272 0 2798 20 0 0 chr5 193819576 193819879 -9265653 - AluYa5 SINE Alu -8 303 1 2270 115 0 3 chr5 193820196 193820501 -9265031 - AluSx SINE Alu -8 304 1 2162 105 7 14 chr5 193820546 193820842 -9264690 - AluSx SINE Alu -6 306 13 1130 158 0 107 chr5 193821194 193821282 -9264250 - AluJb SINE Alu -103 209 113 2307 90 13 0 chr5 193821282 193821582 -9263950 - AluSp SINE Alu -9 304 1 1130 158 0 107 chr5 193821582 193821727 -9263805 - AluJb SINE Alu -199 113 1 251 157 20 0 chr5 193822352 193822403 -9263129 + T-rich Low_complexity Low_complexity 3 54 0 1487 154 45 0 chr5 193822408 193822655 -9262877 - AluJb SINE Alu -54 258 1 690 197 24 0 chr5 193822697 193822824 -9262708 - FLAM_A SINE Alu -3 139 10 1162 249 79 37 chr5 193823217 193823528 -9262004 - L1ME1 LINE L1 -5 6161 5832 1835 160 10 0 chr5 193823528 193823822 -9261710 - AluJb SINE Alu -5 307 11 1162 249 79 37 chr5 193823822 193824015 -9261517 - L1ME1 LINE L1 -334 5832 5649 273 255 60 97 chr5 193824117 193824333 -9261199 - Charlie8 DNA MER1_type -2128 289 82 2412 71 0 10 chr5 193824435 193824731 -9260801 + AluY SINE Alu 1 293 -18 2319 84 0 23 chr5 193825507 193825817 -9259715 + AluSx SINE Alu 1 303 -9 234 261 152 36 chr5 193825900 193826038 -9259494 - MIR SINE MIR 0 262 109 1989 125 61 10 chr5 193826050 193826346 -9259186 - AluSx SINE Alu -1 311 1 1901 140 39 3 chr5 193826632 193826918 -9258614 - AluSx SINE Alu -16 296 1 24 0 0 0 chr5 193827216 193827240 -9258292 + AT_rich Low_complexity Low_complexity 1 24 0 181 219 0 0 chr5 193827495 193827536 -9257996 + L2 LINE L2 3271 3311 -2 2155 121 7 0 chr5 193827937 193828235 -9257297 - AluSq SINE Alu -13 300 1 850 159 0 8 chr5 193828238 193828370 -9257162 - AluJo/FLAM SINE Alu -171 131 1 59 21 0 21 chr5 193828467 193828499 -9257033 + AT_rich Low_complexity Low_complexity 1 32 -61 1772 157 11 7 chr5 193828499 193828786 -9256746 + AluJb SINE Alu 1 288 -24 59 21 0 21 chr5 193828786 193828833 -9256699 + AT_rich Low_complexity Low_complexity 32 80 -13 1691 152 0 63 chr5 193828833 193828996 -9256536 - AluJo SINE Alu -14 298 161 2268 102 0 3 chr5 193828996 193829301 -9256231 - AluY SINE Alu -7 304 1 1691 152 0 63 chr5 193829301 193829439 -9256093 - AluJo SINE Alu -151 161 16 59 21 0 21 chr5 193829439 193829453 -9256079 + AT_rich Low_complexity Low_complexity 80 93 0 212 243 100 29 chr5 193829943 193830013 -9255519 + MIR SINE MIR 70 144 -118 2304 65 0 4 chr5 193830411 193830690 -9254842 + AluSc SINE Alu 1 278 -31 191 59 0 29 chr5 193830693 193830727 -9254805 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2083 124 7 0 chr5 193830738 193831036 -9254496 + AluSq SINE Alu 1 300 -13 25 0 0 0 chr5 193831304 193831329 -9254203 + AT_rich Low_complexity Low_complexity 1 25 0 2231 123 7 0 chr5 193831329 193831639 -9253893 - AluSx SINE Alu 0 312 1 443 244 25 19 chr5 193832419 193832579 -9252953 + CT-rich Low_complexity Low_complexity 3 163 0 331 197 14 0 chr5 193832586 193832657 -9252875 - MSTD LTR MaLR 0 457 386 997 129 0 0 chr5 193832658 193832790 -9252742 + FLAM_C SINE Alu 2 133 0 871 227 230 28 chr5 193832796 193833087 -9252445 - MSTD LTR MaLR -46 350 1 2024 110 20 20 chr5 193833184 193833485 -9252047 + AluSx SINE Alu 1 301 -11 2139 115 3 10 chr5 193833664 193833960 -9251572 - AluSg SINE Alu -16 294 1 3461 157 78 22 chr5 193833999 193834120 -9251412 - L1MB4 LINE L1 -3 6177 6064 2107 117 3 3 chr5 193834120 193834410 -9251122 - AluSx SINE Alu -22 290 1 3461 157 78 22 chr5 193834410 193834976 -9250556 - L1MB4 LINE L1 -116 6064 5451 35 24 0 0 chr5 193835176 193835218 -9250314 + AT_rich Low_complexity Low_complexity 1 42 0 1632 114 128 15 chr5 193835268 193835541 -9249991 - AluSg1 SINE Alu -5 304 1 1136 134 0 23 chr5 193836034 193836206 -9249326 + AluSg/x SINE Alu 138 305 -7 713 182 147 35 chr5 193836340 193836510 -9249022 - MER5A DNA MER1_type 0 189 1 1852 117 64 3 chr5 193838357 193838640 -9246892 + AluSg SINE Alu 1 300 -10 2566 60 0 0 chr5 193838721 193839023 -9246509 - AluY SINE Alu -9 302 1 2304 96 3 3 chr5 193839356 193839659 -9245873 + AluSx SINE Alu 9 311 -1 1879 110 72 21 chr5 193839659 193839950 -9245582 + AluSx SINE Alu 3 308 -4 2397 78 0 28 chr5 193841337 193841656 -9243876 - AluY SINE Alu -1 310 1 2203 125 0 0 chr5 193841658 193841954 -9243578 - AluSq SINE Alu -17 296 1 2453 85 0 0 chr5 193842122 193842428 -9243104 - AluSq SINE Alu -7 306 1 2111 144 0 13 chr5 193843479 193843655 -9241877 - AluSx SINE Alu -3 309 137 2233 105 0 7 chr5 193843655 193843959 -9241573 - AluSx SINE Alu -10 302 1 2111 144 0 13 chr5 193843959 193844095 -9241437 - AluSx SINE Alu -175 137 1 2036 110 28 0 chr5 193844128 193844410 -9241122 + AluSc SINE Alu 1 290 -19 518 108 0 0 chr5 193844418 193844483 -9241049 + AluS SINE Alu 3 67 -246 222 37 0 0 chr5 193844527 193844554 -9240978 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1973 75 29 32 chr5 193844556 193844835 -9240697 - AluSg SINE Alu -32 278 1 566 99 0 0 chr5 193844973 193845054 -9240478 - AluSp/q SINE Alu 0 313 233 272 98 0 24 chr5 193845054 193845095 -9240437 + AluSq SINE Alu 130 169 -134 601 74 0 0 chr5 193845336 193845417 -9240115 - AluSp/q SINE Alu 0 313 233 1403 81 0 0 chr5 193845417 193845589 -9239943 + AluSq SINE Alu 130 301 -12 403 222 0 10 chr5 193845868 193845967 -9239565 + L1MB8 LINE L1 6079 6176 -2 2289 98 7 7 chr5 193845979 193846284 -9239248 + AluSg1 SINE Alu 1 305 -4 212 59 29 0 chr5 193846286 193846320 -9239212 + (CA)n Simple_repeat Simple_repeat 1 35 0 303 315 55 28 chr5 193846424 193846605 -9238927 - L1MC4a LINE L1 -1827 5981 5796 844 127 0 16 chr5 193846630 193846756 -9238776 + AluSq/x SINE Alu 10 133 -180 23 0 0 0 chr5 193847171 193847194 -9238338 + AT_rich Low_complexity Low_complexity 1 23 0 259 262 0 41 chr5 193848322 193848467 -9237065 + (ATG)n Simple_repeat Simple_repeat 2 140 0 35 24 0 0 chr5 193848703 193848745 -9236787 + AT_rich Low_complexity Low_complexity 1 42 0 2056 137 13 0 chr5 193848884 193849191 -9236341 + AluSp SINE Alu 1 311 -2 11623 158 38 77 chr5 193850408 193850612 -9234920 - L1MA9 LINE L1 -5 7726 7516 1664 196 0 0 chr5 193850612 193850898 -9234634 - AluJb SINE Alu -26 286 1 11623 158 38 77 chr5 193850898 193852265 -9233267 - L1MA9 LINE L1 -215 7516 6097 2559 56 0 3 chr5 193852265 193852570 -9232962 - AluY SINE Alu -7 304 1 11623 158 38 77 chr5 193852570 193853057 -9232475 - L1MA9 LINE L1 -1634 6097 5592 2358 72 3 3 chr5 193853057 193853350 -9232182 - AluY SINE Alu -18 293 1 11623 158 38 77 chr5 193853350 193854317 -9231215 - L1MA9 LINE L1 -2139 5592 4588 2116 126 3 0 chr5 193854317 193854611 -9230921 - AluSx SINE Alu -17 295 1 11623 158 38 77 chr5 193854611 193855246 -9230286 - L1MA9 LINE L1 -3143 4588 4254 1821 76 4 4 chr5 193855246 193855482 -9230050 - AluY SINE Alu -5 306 71 11623 158 38 77 chr5 193855482 193855934 -9229598 - L1MA9 LINE L1 -3477 4254 3786 849 206 0 18 chr5 193855935 193856100 -9229432 - AluJb SINE Alu -5 307 146 2348 236 134 57 chr5 193856100 193856226 -9229306 - L1MA9 LINE L1 -3764 3801 3686 1942 169 0 0 chr5 193856226 193856521 -9229011 - AluJb SINE Alu -17 295 1 2348 236 134 57 chr5 193856521 193856958 -9228574 - L1MA9 LINE L1 -3879 3686 3284 1922 113 0 136 chr5 193856958 193857144 -9228388 - AluSx SINE Alu -4 298 179 420 20 0 0 chr5 193857144 193857193 -9228339 + (TG)n Simple_repeat Simple_repeat 2 50 0 1922 113 0 136 chr5 193857193 193857351 -9228181 - AluSx SINE Alu -123 179 1 2348 236 134 57 chr5 193857351 193857496 -9228036 - L1MA9 LINE L1 -4281 3284 3152 2248 96 3 7 chr5 193857496 193857797 -9227735 - AluSx SINE Alu -8 304 5 2348 236 134 57 chr5 193857797 193857926 -9227606 - L1MA9 LINE L1 -4413 3152 3034 718 246 0 8 chr5 193857926 193858060 -9227472 - FLAM_A SINE Alu 0 133 1 2348 236 134 57 chr5 193858060 193858139 -9227393 - L1MA9 LINE L1 -4531 3034 2962 1668 175 31 7 chr5 193858139 193858431 -9227101 - AluJo SINE Alu -13 299 1 2348 236 134 57 chr5 193858431 193858622 -9226910 - L1MA9 LINE L1 -4603 2962 2787 2335 74 14 10 chr5 193858622 193858919 -9226613 - AluSx SINE Alu -14 298 1 2348 236 134 57 chr5 193858919 193859196 -9226336 - L1MA9 LINE L1 -4778 2787 2309 2298 221 125 31 chr5 193859194 193859963 -9225569 - L1M3e LINE L1 -4919 2111 1271 * 347 230 50 50 chr5 193861230 193861330 -9224202 - L2 LINE L2 -15 3298 3199 236 305 42 8 chr5 193861332 193861450 -9224082 + MER103 DNA DNA 45 166 0 1771 174 7 3 chr5 193861606 193861893 -9223639 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr5 193861919 193861949 -9223583 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 87 0 0 chr5 193862418 193862464 -9223068 + (TG)n Simple_repeat Simple_repeat 2 47 0 1956 116 18 4 chr5 193862673 193862971 -9222561 - AluSg SINE Alu 0 302 1 1102 69 0 0 chr5 193862994 193863125 -9222407 - AluY SINE Alu -180 131 1 2121 85 0 70 chr5 193863355 193863671 -9221861 + AluY SINE Alu 1 294 -17 941 185 134 36 chr5 193863792 193863958 -9221574 - L1ME1 LINE L1 -5 6161 5998 2204 99 0 0 chr5 193863958 193864278 -9221254 - AluSq SINE Alu 0 320 1 941 185 134 36 chr5 193864278 193864382 -9221150 - L1ME1 LINE L1 -168 5998 5906 811 127 15 22 chr5 193864921 193865046 -9220486 + AluJo SINE Alu 1 126 -186 2115 115 6 25 chr5 193865046 193865360 -9220172 - AluSx SINE Alu -4 308 1 36 23 0 0 chr5 193865368 193865411 -9220121 + AT_rich Low_complexity Low_complexity 1 43 0 740 220 92 0 chr5 193866571 193866712 -9218820 + AluJo SINE Alu 137 290 -12 515 226 30 24 chr5 193868206 193868224 -9217308 - L1MA10 LINE L1 -1 6333 6316 2936 185 61 62 chr5 193868224 193868510 -9217022 - L1ME1 LINE L1 -6 6160 5875 1342 136 198 4 chr5 193868510 193868753 -9216779 - AluSg1 SINE Alu -19 290 1 2936 185 61 62 chr5 193868753 193869189 -9216343 - L1ME1 LINE L1 -291 5875 5439 812 181 0 22 chr5 193869351 193869489 -9216043 + AluJo SINE Alu 2 136 -176 330 348 21 14 chr5 193870078 193870219 -9215313 - MER5A DNA MER1_type -2 187 46 1638 202 0 7 chr5 193870221 193870523 -9215009 - AluJb SINE Alu -12 300 1 2268 112 3 0 chr5 193870530 193870834 -9214698 - AluSx SINE Alu -5 307 3 2391 96 3 3 chr5 193872322 193872635 -9212897 - AluSp SINE Alu 0 313 1 2074 47 120 22 chr5 193872864 193873138 -9212394 - AluY SINE Alu -10 301 1 545 227 118 17 chr5 193873247 193873366 -9212166 + FLAM_A SINE Alu 2 132 -1 3568 211 33 32 chr5 193873462 193874325 -9211207 - L1ME1 LINE L1 -5 6161 5298 2135 128 3 3 chr5 193874325 193874622 -9210910 + AluSq SINE Alu 1 297 -16 3568 211 33 32 chr5 193874622 193874673 -9210859 - L1ME1 LINE L1 -868 5298 5249 188 88 59 0 chr5 193874703 193874737 -9210795 + CT-rich Low_complexity Low_complexity 3 38 0 206 207 17 0 chr5 193874840 193874898 -9210634 + CT-rich Low_complexity Low_complexity 2 60 0 1997 104 0 29 chr5 193874906 193875045 -9210487 - AluSx SINE Alu -40 272 143 2489 67 0 3 chr5 193875045 193875342 -9210190 - AluY SINE Alu -15 296 1 1997 104 0 29 chr5 193875342 193875482 -9210050 - AluSx SINE Alu -169 143 1 1303 259 31 14 chr5 193875487 193875904 -9209628 - L1ME1 LINE L1 -961 5185 4762 817 129 7 90 chr5 193875927 193876082 -9209450 + FLAM_C SINE Alu 2 143 0 704 133 95 0 chr5 193876089 193876194 -9209338 - FLAM_C SINE Alu -18 115 1 3872 221 91 77 chr5 193876229 193877538 -9207994 - L1ME1 LINE L1 -1377 4769 3480 2172 122 0 10 chr5 193877538 193877850 -9207682 - AluSx SINE Alu 0 312 4 2207 118 10 0 chr5 193877856 193878161 -9207371 - AluSq SINE Alu -5 308 1 3872 221 91 77 chr5 193878161 193878495 -9207037 - L1ME1 LINE L1 -2670 3476 3096 2404 82 0 0 chr5 193878497 193878790 -9206742 - AluY SINE Alu -18 293 1 205 211 0 88 chr5 193878877 193878934 -9206598 - L2 LINE L2 -1 3271 3220 883 202 12 18 chr5 193879029 193879197 -9206335 - FAM SINE Alu -8 167 1 288 48 0 24 chr5 193879241 193879283 -9206249 + (TTG)n Simple_repeat Simple_repeat 2 180 0 1896 150 3 3 chr5 193879283 193879569 -9205963 - AluSx SINE Alu -26 286 1 3355 40 0 5 chr5 193879708 193880164 -9205368 - L1PA3 LINE L1 0 6155 5758 584 275 37 58 chr5 193881316 193881444 -9204088 - HAL1b LINE L1 -809 539 410 2042 107 76 7 chr5 193881444 193881734 -9203798 + AluSg SINE Alu 1 310 0 584 275 37 58 chr5 193881734 193881900 -9203632 - HAL1b LINE L1 -938 410 251 1848 132 0 4 chr5 193882006 193882316 -9203216 - AluSx SINE Alu 0 356 48 2356 89 0 3 chr5 193882728 193883031 -9202501 + AluSc SINE Alu 3 304 -5 674 215 23 0 chr5 193883039 193883169 -9202363 + FLAM_A SINE Alu 1 133 0 2234 114 0 0 chr5 193883285 193883583 -9201949 - AluSx SINE Alu -14 298 1 733 174 0 138 chr5 193884046 193884241 -9201291 + AluJb SINE Alu 135 302 -10 1752 142 73 0 chr5 193884295 193884584 -9200948 - AluSx SINE Alu -2 310 1 2470 93 0 0 chr5 193884587 193884897 -9200635 - AluSg SINE Alu 0 310 1 387 290 153 66 chr5 193885034 193885897 -9199635 - L1M4 LINE L1 -2948 3198 2261 2259 71 0 0 chr5 193885901 193886216 -9199316 - AluY SINE Alu 0 315 1 2582 52 0 7 chr5 193886243 193886549 -9198983 - AluY SINE Alu -7 304 1 1773 161 20 13 chr5 193886573 193886871 -9198661 + AluJo SINE Alu 1 300 -12 2365 95 7 0 chr5 193886949 193887255 -9198277 - AluSg SINE Alu -2 308 1 1595 134 53 63 chr5 193887664 193887833 -9197699 - AluJo SINE Alu -16 296 130 1939 140 26 16 chr5 193887833 193888141 -9197391 - AluSx SINE Alu -1 311 1 1595 134 53 63 chr5 193888141 193888270 -9197262 - AluJo SINE Alu -182 130 1 1348 245 138 27 chr5 193888271 193888822 -9196710 - L1MC4 LINE L1 -81 7961 7350 324 0 0 0 chr5 193888830 193888866 -9196666 + (CA)n Simple_repeat Simple_repeat 2 37 0 2065 138 3 0 chr5 193888866 193889164 -9196368 - AluSg SINE Alu -11 299 1 2362 105 0 3 chr5 193889216 193889521 -9196011 - AluSq SINE Alu -9 304 1 776 43 14 43 chr5 193889535 193889674 -9195858 + (TCCCC)n Simple_repeat Simple_repeat 4 138 0 1908 113 3 107 chr5 193889782 193890118 -9195414 - AluSp SINE Alu -12 301 1 282 29 0 0 chr5 193891440 193891475 -9194057 + (TA)n Simple_repeat Simple_repeat 1 35 0 186 133 0 0 chr5 193891923 193891953 -9193579 + (A)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr5 193894866 193894889 -9190643 + AT_rich Low_complexity Low_complexity 1 23 0 276 247 27 14 chr5 193896951 193897024 -9188508 - L2 LINE L2 -6 3307 3234 250 246 8 49 chr5 193898309 193898431 -9187101 + L1MC/D LINE L1 4407 4523 -1623 21 0 0 0 chr5 193898469 193898490 -9187042 + AT_rich Low_complexity Low_complexity 1 21 0 501 293 48 25 chr5 193898645 193898933 -9186599 + L1MC/D LINE L1 4735 5034 -1112 1021 271 103 17 chr5 193899154 193899505 -9186027 + L1MC/D LINE L1 5254 5634 -2174 406 210 30 20 chr5 193899542 193899642 -9185890 + MIR SINE MIR 160 260 -2 416 237 33 46 chr5 193899649 193899801 -9185731 - MIR SINE MIR 0 262 113 2581 61 3 10 chr5 193900026 193900339 -9185193 - AluY SINE Alu 0 311 1 202 210 91 119 chr5 193900341 193900484 -9185048 + MIR SINE MIR 63 201 -61 2311 92 14 0 chr5 193900484 193900779 -9184753 + AluSg SINE Alu 1 299 -11 184 222 0 0 chr5 193900875 193900920 -9184612 - L2 LINE L2 -336 2977 2933 196 349 12 0 chr5 193901139 193901222 -9184310 - L2 LINE L2 -556 2758 2675 301 248 149 28 chr5 193901308 193901449 -9184083 - L1ME4a LINE L1 -22 6099 5942 2536 42 3 10 chr5 193902578 193902888 -9182644 - AluY SINE Alu -3 308 1 553 261 118 20 chr5 193903303 193903506 -9182026 - MIR SINE MIR -13 249 27 2553 50 3 0 chr5 193904310 193904608 -9180924 + AluY SINE Alu 1 299 -12 1691 123 8 0 chr5 193905033 193905269 -9180263 + AluSg/x SINE Alu 66 303 -9 486 0 0 0 chr5 193905269 193905323 -9180209 + (TA)n Simple_repeat Simple_repeat 2 55 0 653 177 0 26 chr5 193905323 193905436 -9180096 - FLAM_C SINE Alu -20 123 14 2167 126 60 20 chr5 193906372 193906722 -9178810 - THE1B LTR MaLR 0 364 1 1349 126 30 7 chr5 193906771 193907139 -9178393 - MSTB LTR MaLR 0 426 1 2138 137 3 0 chr5 193907162 193907461 -9178071 + AluSx SINE Alu 1 300 -12 237 244 55 63 chr5 193907872 193907999 -9177533 - L1MC4a LINE L1 -1785 6023 5898 2267 96 7 3 chr5 193908019 193908320 -9177212 - AluSg SINE Alu -8 302 1 2001 156 3 10 chr5 193908399 193908706 -9176826 - AluJb SINE Alu -7 305 1 203 288 25 50 chr5 193909456 193909536 -9175996 - L2 LINE L2 -39 3274 3197 2447 81 0 0 chr5 193909536 193909834 -9175698 - AluY SINE Alu -13 298 1 1301 258 35 66 chr5 193910187 193910419 -9175113 - L1MEd LINE L1 -5314 805 567 2460 55 7 0 chr5 193910419 193910712 -9174820 - AluY SINE Alu -16 295 1 1301 258 35 66 chr5 193910712 193911057 -9174475 - L1MEd LINE L1 -5552 567 246 233 263 79 0 chr5 193911060 193911136 -9174396 + MER5C DNA MER1_type 43 124 -200 676 295 30 8 chr5 193911208 193911445 -9174087 - L1MEd LINE L1 -5874 245 4 2112 128 3 0 chr5 193911710 193912007 -9173525 - AluSx SINE Alu -14 298 1 180 0 0 0 chr5 193912301 193912321 -9173211 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 30 21 0 21 chr5 193912584 193912604 -9172928 + AT_rich Low_complexity Low_complexity 1 20 -27 2289 83 21 0 chr5 193912604 193912894 -9172638 + AluSg SINE Alu 1 296 -14 30 21 0 21 chr5 193912894 193912921 -9172611 + AT_rich Low_complexity Low_complexity 20 47 0 840 146 62 14 chr5 193912921 193913065 -9172467 - FRAM SINE Alu -15 151 1 1513 196 14 7 chr5 193913547 193913827 -9171705 + AluJb SINE Alu 1 282 -30 2457 71 0 7 chr5 193913827 193914135 -9171397 - AluY SINE Alu -5 306 1 186 71 0 0 chr5 193914146 193914174 -9171358 + (A)n Simple_repeat Simple_repeat 1 28 0 2349 111 0 0 chr5 193914603 193914901 -9170631 - AluSq SINE Alu -15 298 1 2025 138 0 13 chr5 193915113 193915417 -9170115 - AluJb SINE Alu -12 300 1 2150 117 0 7 chr5 193916226 193916525 -9169007 - AluSx SINE Alu -15 297 1 727 332 37 7 chr5 193916753 193917048 -9168484 - L1MC4a LINE L1 -385 5736 5433 2418 83 3 0 chr5 193917420 193917720 -9167812 - AluSp SINE Alu -12 301 1 560 145 73 106 chr5 193918259 193918438 -9167094 - L1MC5 LINE L1 -136 7825 7653 247 279 53 58 chr5 193918882 193919072 -9166460 + L1MC5 LINE L1 7749 7937 -24 1158 185 26 73 chr5 193919300 193919528 -9166004 - MER33 DNA MER1_type -2261 324 116 2337 98 0 16 chr5 193919528 193919835 -9165697 + AluSx SINE Alu 1 302 -10 1158 185 26 73 chr5 193919835 193919946 -9165586 - MER33 DNA MER1_type -2469 116 1 2203 128 0 7 chr5 193921598 193921903 -9163629 - AluSx SINE Alu -9 303 1 819 142 8 30 chr5 193922181 193922315 -9163217 + FLAM_C SINE Alu 3 133 0 431 276 61 61 chr5 193922690 193922886 -9162646 + MIR SINE MIR 13 208 -54 297 0 0 0 chr5 193923191 193923224 -9162308 + (CA)n Simple_repeat Simple_repeat 2 34 0 285 223 0 32 chr5 193923761 193923855 -9161677 - L1MC4 LINE L1 -1339 6703 6613 2428 61 0 17 chr5 193923872 193924169 -9161363 - AluSg1 SINE Alu -17 292 1 2164 123 0 7 chr5 193924281 193924582 -9160950 - AluJo SINE Alu -13 299 1 666 309 106 10 chr5 193924646 193925063 -9160469 - L2 LINE L2 -2 3311 2855 2904 118 25 11 chr5 193926957 193927396 -9158136 + MER4C LTR ERV1 21 465 0 343 89 0 0 chr5 193927486 193927531 -9158001 + Alu SINE Alu 1 45 -257 595 143 62 139 chr5 193927636 193927755 -9157777 - L1ME LINE L1 -698 5468 5341 2239 140 0 52 chr5 193927755 193928140 -9157392 + MLT1A1 LTR MaLR 1 365 0 595 143 62 139 chr5 193928140 193928152 -9157380 - L1ME LINE L1 -825 5341 5330 2259 112 0 0 chr5 193928152 193928446 -9157086 - AluSx SINE Alu -18 294 1 595 143 62 139 chr5 193928446 193928498 -9157034 - L1ME LINE L1 -836 5330 5299 5690 39 40 6 chr5 193928498 193929200 -9156332 - L1PA5 LINE L1 0 6154 5429 595 143 62 139 chr5 193929200 193929223 -9156309 - L1ME LINE L1 -867 5299 5276 2328 86 0 13 chr5 193929591 193929895 -9155637 - AluY SINE Alu -11 300 1 2436 86 0 13 chr5 193930060 193930375 -9155157 - AluY SINE Alu 0 311 1 808 100 62 0 chr5 193930390 193930520 -9155012 - L1MB8 LINE L1 -1 6177 6040 1630 139 139 26 chr5 193930604 193930907 -9154625 - MER1B DNA MER1_type 0 337 1 248 301 0 11 chr5 193931170 193931263 -9154269 + L1MB3 LINE L1 5434 5525 -649 879 152 0 28 chr5 193931534 193931679 -9153853 + FLAM_C SINE Alu 3 143 0 2314 91 7 13 chr5 193931815 193932122 -9153410 - AluSq SINE Alu -8 305 1 2267 117 0 10 chr5 193932532 193932861 -9152671 + AluSx SINE Alu 1 312 0 2808 175 59 7 chr5 193933534 193934093 -9151439 + L1MB3 LINE L1 5565 6152 -31 275 252 48 75 chr5 193934177 193934324 -9151208 + LTR50 LTR ERVL 529 671 -124 1780 125 53 59 chr5 193934436 193934740 -9150792 - AluSx SINE Alu -10 302 1 938 255 122 32 chr5 193935577 193936077 -9149455 + MLT1G1 LTR MaLR 9 595 0 393 162 86 51 chr5 193936146 193936263 -9149269 - L1ME4a LINE L1 0 6121 6001 700 124 9 0 chr5 193936457 193936570 -9148962 - L1PB4 LINE L1 -1 6155 6042 1159 283 168 8 chr5 193937440 193937946 -9147586 + MLT1K LTR MaLR 2 588 0 1901 158 33 10 chr5 193938222 193938526 -9147006 - AluJo SINE Alu -1 311 1 2378 99 3 6 chr5 193938670 193938983 -9146549 + AluSx SINE Alu 1 312 0 352 289 0 25 chr5 193939402 193939523 -9146009 - Charlie8 DNA MER1_type -2229 188 71 2261 80 3 11 chr5 193939528 193939814 -9145718 + AluSx SINE Alu 3 286 -26 205 73 24 24 chr5 193939864 193939905 -9145627 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 249 368 0 0 chr5 193939963 193940058 -9145474 + L1MC4a LINE L1 5562 5656 -506 1260 168 92 45 chr5 193940073 193940455 -9145077 - Charlie1 DNA MER1_type -17 2744 2345 5586 72 33 0 chr5 193940460 193941239 -9144293 + L1PB1 LINE L1 5278 6082 -69 343 123 0 18 chr5 193941285 193941342 -9144190 - Charlie1 DNA MER1_type -2702 59 4 409 306 78 0 chr5 193941404 193941610 -9143922 + L1MC4a LINE L1 5705 5926 -1882 2140 144 23 28 chr5 193941617 193941749 -9143783 - L1MB3 LINE L1 -1 6182 6051 2226 94 0 42 chr5 193941749 193942057 -9143475 - AluSq SINE Alu -18 295 1 2140 144 23 28 chr5 193942057 193942320 -9143212 - L1MB3 LINE L1 -132 6051 5789 2059 126 0 40 chr5 193943159 193943460 -9142072 + AluSx SINE Alu 13 301 -11 736 253 7 0 chr5 193943699 193943845 -9141687 + AluJb SINE Alu 136 282 -30 351 0 0 0 chr5 193943850 193943889 -9141643 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 23 54 0 0 chr5 193944022 193944059 -9141473 + AT_rich Low_complexity Low_complexity 1 37 0 1999 157 3 3 chr5 193944114 193944414 -9141118 - AluSx SINE Alu -12 300 1 1797 167 7 23 chr5 193944489 193944795 -9140737 - AluJo SINE Alu -9 303 3 1107 248 31 10 chr5 193944860 193945154 -9140378 + L1MD2 LINE L1 5637 5936 -423 1249 176 62 21 chr5 193945161 193945450 -9140082 - L1MB8 LINE L1 -6 6172 5872 1141 177 27 14 chr5 193945457 193945677 -9139855 - L1PA16 LINE L1 -2 6164 5942 1120 189 81 101 chr5 193945679 193945814 -9139718 + L1MD2 LINE L1 5924 6060 -299 2261 110 0 7 chr5 193945814 193946115 -9139417 - AluSx SINE Alu -13 299 1 1120 189 81 101 chr5 193946115 193946283 -9139249 + L1MD2 LINE L1 6060 6218 -141 2120 130 23 3 chr5 193946283 193946583 -9138949 - AluSx SINE Alu -6 306 1 1120 189 81 101 chr5 193946583 193946722 -9138810 + L1MD2 LINE L1 6218 6358 -1 1185 206 159 75 chr5 193947219 193947685 -9137847 - MLT1D LTR MaLR 0 505 1 187 292 22 45 chr5 193947787 193947876 -9137656 + L2 LINE L2 3186 3272 0 1093 155 58 113 chr5 193948499 193948814 -9136718 - MLT1C LTR MaLR 0 467 123 2392 83 7 0 chr5 193948814 193949114 -9136418 - AluSx SINE Alu -10 302 1 1093 155 58 113 chr5 193949114 193949230 -9136302 - MLT1C LTR MaLR -344 123 2 284 342 150 8 chr5 193949503 193949623 -9135909 + L2 LINE L2 3176 3312 -1 234 0 0 0 chr5 193999751 193999777 -9085755 + (CA)n Simple_repeat Simple_repeat 2 27 0 1938 138 3 0 chr5 193999777 194000074 -9085458 - AluSg SINE Alu -12 298 1 2241 102 0 3 chr5 194000126 194000430 -9085102 - AluSq SINE Alu -10 303 1 644 229 0 0 chr5 194000573 194000691 -9084841 - FRAM SINE Alu -56 120 3 377 279 115 36 chr5 194000833 194000878 -9084654 - HAL1 LINE L1 -77 2430 2390 1706 112 3 112 chr5 194000878 194001200 -9084332 - AluSp SINE Alu -26 287 1 377 279 115 36 chr5 194001200 194001319 -9084213 - HAL1 LINE L1 -117 2390 2253 300 27 0 0 chr5 194002521 194002558 -9082974 + (TA)n Simple_repeat Simple_repeat 1 37 0 186 133 0 0 chr5 194003004 194003034 -9082498 + (A)n Simple_repeat Simple_repeat 1 30 0 308 231 77 13 chr5 194005320 194005398 -9080134 - L2 LINE L2 -6 3307 3225 186 304 173 12 chr5 194005955 194006123 -9079409 - MIR SINE MIR -34 228 34 243 246 8 49 chr5 194006687 194006809 -9078723 + L1MC/D LINE L1 4407 4523 -1623 21 0 0 0 chr5 194006847 194006868 -9078664 + AT_rich Low_complexity Low_complexity 1 21 0 491 293 48 25 chr5 194007023 194007312 -9078220 + L1MC/D LINE L1 4735 5034 -1112 1003 282 97 11 chr5 194007533 194007884 -9077648 + L1MC/D LINE L1 5254 5634 -2174 456 210 30 20 chr5 194007921 194008021 -9077511 + MIR SINE MIR 160 260 -2 485 238 171 36 chr5 194008028 194008221 -9077311 - MIR SINE MIR 0 262 44 2453 58 3 10 chr5 194008405 194008717 -9076815 - AluY SINE Alu -1 310 1 262 204 92 120 chr5 194008835 194008977 -9076555 + MIR SINE MIR 64 201 -61 2208 93 13 0 chr5 194008977 194009277 -9076255 + AluSg SINE Alu 1 304 -6 192 266 16 16 chr5 194009375 194009439 -9076093 - L2 LINE L2 -298 2974 2911 217 344 31 0 chr5 194009637 194009733 -9075799 - L2 LINE L2 -556 2758 2660 388 248 149 28 chr5 194009806 194009947 -9075585 - L1ME4a LINE L1 -22 6099 5942 2397 48 3 10 chr5 194011072 194011385 -9074147 - AluY SINE Alu 0 311 1 640 261 118 20 chr5 194011800 194012003 -9073529 - MIR SINE MIR -13 249 27 2395 54 3 0 chr5 194012807 194013105 -9072427 + AluY SINE Alu 1 299 -12 1646 119 8 0 chr5 194013531 194013774 -9071758 + AluSg/x SINE Alu 66 310 -2 288 0 0 0 chr5 194013774 194013806 -9071726 + (TA)n Simple_repeat Simple_repeat 2 33 0 676 168 0 26 chr5 194013806 194013919 -9071613 - FLAM_C SINE Alu -20 123 14 2151 129 60 20 chr5 194014858 194015208 -9070324 - THE1B LTR MaLR 0 364 1 1352 126 30 7 chr5 194015257 194015625 -9069907 - MSTB LTR MaLR 0 426 1 1997 133 3 0 chr5 194015653 194015946 -9069586 + AluSx SINE Alu 7 300 -12 469 262 77 124 chr5 194016320 194016504 -9069028 - L1MC4a LINE L1 -1746 6062 5871 2138 96 7 3 chr5 194016504 194016805 -9068727 - AluSg SINE Alu -8 302 1 469 262 77 124 chr5 194016805 194016884 -9068648 - L1MC4a LINE L1 -1937 5871 5818 1884 156 3 10 chr5 194016884 194017191 -9068341 - AluJb SINE Alu -7 305 1 469 262 77 124 chr5 194017191 194017288 -9068244 - L1MC4a LINE L1 -1990 5818 5718 232 250 112 118 chr5 194017917 194018021 -9067511 - L2 LINE L2 -1 3271 3167 2302 84 0 0 chr5 194018021 194018319 -9067213 - AluY SINE Alu -13 298 1 232 250 112 118 chr5 194018319 194018366 -9067166 - L2 LINE L2 -105 3167 3121 1288 259 35 64 chr5 194018588 194018833 -9066699 - L1MEd LINE L1 -5300 819 568 2316 58 7 0 chr5 194018833 194019126 -9066406 - AluY SINE Alu -16 295 1 1288 259 35 64 chr5 194019126 194019471 -9066061 - L1MEd LINE L1 -5551 568 246 269 263 79 0 chr5 194019474 194019550 -9065982 + MER5C DNA MER1_type 43 124 -200 689 295 30 8 chr5 194019622 194019859 -9065673 - L1MEd LINE L1 -5874 245 4 1979 128 3 0 chr5 194020124 194020420 -9065112 - AluSx SINE Alu -15 297 1 180 0 0 0 chr5 194020714 194020734 -9064798 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 23 42 0 21 chr5 194020997 194021017 -9064515 + AT_rich Low_complexity Low_complexity 1 20 -27 2130 82 21 3 chr5 194021017 194021308 -9064224 + AluSg SINE Alu 1 296 -14 23 42 0 21 chr5 194021308 194021335 -9064197 + AT_rich Low_complexity Low_complexity 20 47 0 849 146 62 14 chr5 194021335 194021479 -9064053 - FRAM SINE Alu -15 151 1 1529 166 13 45 chr5 194022021 194022295 -9063237 + AluJb SINE Alu 7 271 -41 2328 71 0 7 chr5 194022295 194022603 -9062929 - AluY SINE Alu -5 306 1 1529 166 13 45 chr5 194022603 194022642 -9062890 + AluJb SINE Alu 271 310 -2 2221 111 0 0 chr5 194023071 194023369 -9062163 - AluSq SINE Alu -15 298 1 1908 141 0 13 chr5 194023579 194023885 -9061647 - AluJb SINE Alu -10 302 1 1997 124 0 7 chr5 194024693 194024992 -9060540 - AluSx SINE Alu -15 297 1 730 332 37 7 chr5 194025218 194025513 -9060019 - L1MC4a LINE L1 -385 5736 5433 2284 86 3 0 chr5 194025885 194026188 -9059344 - AluSp SINE Alu -9 304 1 592 184 113 82 chr5 194026650 194026906 -9058626 - L1MC5 LINE L1 -45 7916 7653 256 279 53 58 chr5 194027350 194027540 -9057992 + L1MC5 LINE L1 7749 7937 -24 1135 185 26 73 chr5 194027768 194027996 -9057536 - MER33 DNA MER1_type -2261 324 116 2224 94 0 16 chr5 194027996 194028303 -9057229 + AluSx SINE Alu 1 302 -10 1135 185 26 73 chr5 194028303 194028414 -9057118 - MER33 DNA MER1_type -2469 116 1 2077 128 0 7 chr5 194029975 194030280 -9055252 - AluSx SINE Alu -9 303 1 821 142 8 30 chr5 194030558 194030692 -9054840 + FLAM_C SINE Alu 3 133 0 504 306 41 41 chr5 194031067 194031263 -9054269 + MIR SINE MIR 13 208 -54 243 0 0 0 chr5 194031568 194031595 -9053937 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 85 0 0 chr5 194032117 194032164 -9053368 - LTR66 LTR ERVL -170 440 394 226 196 39 0 chr5 194032177 194032228 -9053304 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 2425 61 0 17 chr5 194032237 194032533 -9052999 - AluSg1 SINE Alu -18 291 1 2208 123 0 7 chr5 194032645 194032947 -9052585 - AluJo SINE Alu -12 300 1 843 309 106 10 chr5 194033011 194033428 -9052104 - L2 LINE L2 -2 3311 2855 182 283 97 0 chr5 194033482 194033595 -9051937 + L2 LINE L2 1947 2070 -1244 2767 116 25 11 chr5 194035322 194035761 -9049771 + MER4C LTR ERV1 21 465 0 2290 110 0 0 chr5 194035851 194036141 -9049391 + AluSx SINE Alu 1 290 -22 546 131 73 136 chr5 194036141 194036257 -9049275 - L1ME LINE L1 -698 5468 5346 2295 138 0 52 chr5 194036257 194036642 -9048890 + MLT1A1 LTR MaLR 1 365 0 546 131 73 136 chr5 194036642 194036654 -9048878 - L1ME LINE L1 -820 5346 5335 2277 112 0 0 chr5 194036654 194036948 -9048584 - AluSx SINE Alu -18 294 1 546 131 73 136 chr5 194036948 194037000 -9048532 - L1ME LINE L1 -831 5335 5299 5652 35 49 6 chr5 194037000 194037696 -9047836 - L1PA5 LINE L1 0 6154 5429 546 131 73 136 chr5 194037696 194037719 -9047813 - L1ME LINE L1 -867 5299 5276 2243 82 0 20 chr5 194038087 194038381 -9047151 - AluY SINE Alu -10 301 14 1067 106 0 0 chr5 194038481 194038613 -9046919 + AluSp/q SINE Alu 156 287 -26 2122 160 97 13 chr5 194038664 194038834 -9046698 + MSTB LTR MaLR 1 155 -271 2396 102 0 0 chr5 194038834 194039137 -9046395 + AluSx SINE Alu 1 303 -9 2122 160 97 13 chr5 194039137 194039359 -9046173 + MSTB LTR MaLR 155 426 0 308 269 126 63 chr5 194039372 194039547 -9045985 - L1ME LINE L1 -286 5835 5650 2269 110 3 10 chr5 194039696 194040005 -9045527 + AluSx SINE Alu 1 307 -5 2436 86 0 13 chr5 194040042 194040398 -9045134 - AluY SINE Alu 0 352 1 808 100 62 0 chr5 194040413 194040543 -9044989 - L1MB8 LINE L1 -1 6177 6040 1630 139 139 26 chr5 194040627 194040930 -9044602 - MER1B DNA MER1_type 0 337 1 248 301 0 11 chr5 194041193 194041286 -9044246 + L1MB3 LINE L1 5434 5525 -649 879 152 0 28 chr5 194041557 194041702 -9043830 + FLAM_C SINE Alu 3 143 0 2314 91 7 13 chr5 194041838 194042145 -9043387 - AluSq SINE Alu -8 305 1 2267 117 0 10 chr5 194042555 194042884 -9042648 + AluSx SINE Alu 1 312 0 2836 174 59 7 chr5 194043557 194044116 -9041416 + L1MB3 LINE L1 5565 6152 -31 295 279 78 59 chr5 194044200 194044404 -9041128 + LTR50 LTR ERVL 529 736 -59 1780 125 53 59 chr5 194044459 194044763 -9040769 - AluSx SINE Alu -10 302 1 938 255 122 32 chr5 194045600 194046100 -9039432 + MLT1G1 LTR MaLR 9 595 0 393 162 86 51 chr5 194046168 194046285 -9039247 - L1ME4a LINE L1 0 6121 6001 700 124 9 0 chr5 194046479 194046592 -9038940 - L1PB4 LINE L1 -1 6155 6042 806 284 126 12 chr5 194047462 194047968 -9037564 + MLT1K LTR MaLR 2 588 0 1901 158 33 10 chr5 194048244 194048548 -9036984 - AluJo SINE Alu -1 311 1 330 67 0 0 chr5 194048830 194048875 -9036657 + (A)n Simple_repeat Simple_repeat 1 45 0 352 289 0 25 chr5 194049290 194049411 -9036121 - Charlie8 DNA MER1_type -2218 199 82 2344 97 3 10 chr5 194049416 194049785 -9035747 + AluSx SINE Alu 3 369 0 248 368 0 0 chr5 194049843 194049938 -9035594 + L1MC4a LINE L1 5562 5656 -506 1231 168 94 45 chr5 194049953 194050334 -9035198 - Charlie1 DNA MER1_type -17 2744 2345 5617 69 33 0 chr5 194050339 194051118 -9034414 + L1PB1 LINE L1 5278 6082 -69 343 123 0 18 chr5 194051164 194051221 -9034311 - Charlie1 DNA MER1_type -2702 59 4 392 311 78 0 chr5 194051283 194051489 -9034043 + L1MC4a LINE L1 5705 5926 -1882 2124 147 23 28 chr5 194051496 194051628 -9033904 - L1MB3 LINE L1 -1 6182 6051 2214 97 0 42 chr5 194051628 194051936 -9033596 - AluSq SINE Alu -18 295 1 2124 147 23 28 chr5 194051936 194052199 -9033333 - L1MB3 LINE L1 -132 6051 5789 2047 125 0 46 chr5 194053037 194053340 -9032192 + AluSx SINE Alu 13 301 -11 736 253 7 0 chr5 194053579 194053725 -9031807 + AluJb SINE Alu 136 282 -30 279 0 0 0 chr5 194053730 194053761 -9031771 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr5 194053894 194053931 -9031601 + AT_rich Low_complexity Low_complexity 1 37 0 1999 157 3 3 chr5 194053986 194054286 -9031246 - AluSx SINE Alu -12 300 1 1782 167 7 23 chr5 194054361 194054667 -9030865 - AluJo SINE Alu -9 303 3 1107 248 31 10 chr5 194054732 194055026 -9030506 + L1MD2 LINE L1 5637 5936 -423 1249 176 62 21 chr5 194055033 194055322 -9030210 - L1MB8 LINE L1 -6 6172 5872 1141 177 27 14 chr5 194055329 194055549 -9029983 - L1PA16 LINE L1 -2 6164 5942 1120 189 81 101 chr5 194055551 194055686 -9029846 + L1MD2 LINE L1 5924 6060 -299 2230 113 0 7 chr5 194055686 194055986 -9029546 - AluSx SINE Alu -14 298 1 1120 189 81 101 chr5 194055986 194056154 -9029378 + L1MD2 LINE L1 6060 6218 -141 2120 130 23 3 chr5 194056154 194056454 -9029078 - AluSx SINE Alu -6 306 1 1120 189 81 101 chr5 194056454 194056593 -9028939 + L1MD2 LINE L1 6218 6358 -1 1184 206 159 75 chr5 194057090 194057556 -9027976 - MLT1D LTR MaLR 0 505 1 180 292 22 45 chr5 194057658 194057747 -9027785 + L2 LINE L2 3186 3272 0 2079 163 0 0 chr5 194058305 194058611 -9026921 + AluJb SINE Alu 7 312 0 2264 209 103 36 chr5 194058890 194059441 -9026091 + MLT1G LTR MaLR 1 588 -2 254 296 14 0 chr5 194059996 194060067 -9025465 + L2 LINE L2 3201 3272 0 1093 159 58 112 chr5 194060212 194060527 -9025005 - MLT1C LTR MaLR 0 467 123 2437 83 3 0 chr5 194060527 194060828 -9024704 - AluSx SINE Alu -10 302 1 1093 159 58 112 chr5 194060828 194060944 -9024588 - MLT1C LTR MaLR -344 123 2 284 342 150 8 chr5 194061216 194061336 -9024196 + L2 LINE L2 3176 3312 -1 192 287 187 13 chr5 194061946 194062096 -9023436 - MIR SINE MIR -81 181 6 313 250 204 0 chr5 194062265 194062353 -9023179 - MIR SINE MIR -57 151 46 226 219 0 0 chr5 194062831 194062872 -9022660 + polypurine Low_complexity Low_complexity 1 41 0 210 353 15 0 chr5 194062873 194062941 -9022591 + MIR SINE MIR 10 78 -184 2409 101 0 16 chr5 194063064 194063380 -9022152 + AluSx SINE Alu 1 311 -1 190 308 192 10 chr5 194063723 194063827 -9021705 + L2 LINE L2 3185 3307 -6 286 267 0 0 chr5 194063829 194063889 -9021643 - MIR SINE MIR -1 261 202 529 219 17 17 chr5 194063889 194064067 -9021465 + CT-rich Low_complexity Low_complexity 3 180 0 584 61 0 12 chr5 194064169 194064251 -9021281 + (TTCC)n Simple_repeat Simple_repeat 1 81 0 2133 146 3 0 chr5 194064251 194064546 -9020986 - AluSx SINE Alu -16 296 1 533 264 77 7 chr5 194064564 194064719 -9020813 - MIR SINE MIR -86 176 11 406 343 36 12 chr5 194064734 194064982 -9020550 - L2 LINE L2 -191 3081 2828 296 202 172 40 chr5 194065076 194065175 -9020357 + MLT1J LTR MaLR 105 216 -295 2285 94 3 41 chr5 194065179 194065499 -9020033 + AluSp SINE Alu 1 308 -5 244 250 23 11 chr5 194065692 194065780 -9019752 + MLT1J LTR MaLR 416 504 -7 304 262 135 0 chr5 194065901 194066027 -9019505 - Charlie8 DNA MER1_type -1961 456 314 844 179 62 0 chr5 194066029 194066174 -9019358 + FRAM SINE Alu 1 154 -22 24 0 0 0 chr5 194066810 194066834 -9018698 + AT_rich Low_complexity Low_complexity 1 24 0 225 171 0 0 chr5 194067501 194067542 -9017990 + MER4E LTR ERV1 654 694 -72 27 0 0 0 chr5 194067553 194067580 -9017952 + AT_rich Low_complexity Low_complexity 1 27 0 1499 190 27 60 chr5 194068628 194068997 -9016535 - L1MB3 LINE L1 -15 6168 5812 390 109 0 0 chr5 194069045 194069109 -9016423 + HY3 scRNA scRNA 37 100 -1 1486 150 0 13 chr5 194069120 194069353 -9016179 + AluJb SINE Alu 83 312 0 1644 178 33 12 chr5 194069358 194069689 -9015843 - L1MB3 LINE L1 -352 5831 5494 622 174 98 23 chr5 194069691 194069823 -9015709 - FLAM_A SINE Alu 0 142 1 1076 92 0 6 chr5 194069850 194070014 -9015518 + (TTCC)n Simple_repeat Simple_repeat 2 164 0 1161 180 4 31 chr5 194070034 194070264 -9015268 - L1MB3 LINE L1 -691 5489 5297 2648 59 0 0 chr5 194070264 194070568 -9014964 + AluY SINE Alu 1 304 -7 1161 180 4 31 chr5 194070568 194070743 -9014789 - L1MB3 LINE L1 -883 5297 5119 259 231 0 0 chr5 194071616 194071668 -9013864 - L2 LINE L2 0 3313 3262 411 338 117 0 chr5 194071697 194071919 -9013613 + MIR SINE MIR 15 262 0 1795 158 20 17 chr5 194072066 194072363 -9013169 + AluJb SINE Alu 11 308 -4 2365 99 3 0 chr5 194072673 194072975 -9012557 + AluY SINE Alu 1 303 -8 339 172 17 0 chr5 194072995 194073053 -9012479 + MER70A LTR ERVL 401 459 -13 233 254 0 16 chr5 194073509 194073572 -9011960 - MLT1H LTR MaLR -383 166 105 874 258 65 65 chr5 194073631 194074034 -9011498 + L2 LINE L2 2826 3228 -85 1784 157 0 53 chr5 194074173 194074492 -9011040 + AluJb SINE Alu 1 302 -10 229 319 164 0 chr5 194074543 194074659 -9010873 - L2 LINE L2 0 3272 3138 204 273 34 91 chr5 194074768 194074856 -9010676 - L2 LINE L2 0 3272 3190 2404 103 3 0 chr5 194075080 194075390 -9010142 + AluSq SINE Alu 1 311 -2 30 0 0 0 chr5 194075392 194075422 -9010110 + AT_rich Low_complexity Low_complexity 1 30 0 559 279 124 33 chr5 194076493 194076956 -9008576 - L2 LINE L2 -223 3090 2526 377 306 82 0 chr5 194077034 194077168 -9008364 + MIR SINE MIR 5 149 -113 3041 173 19 5 chr5 194077170 194077754 -9007778 + L1MB4 LINE L1 5588 6179 -1 2316 96 0 0 chr5 194077763 194078054 -9007478 + AluSx SINE Alu 1 291 -21 183 208 83 0 chr5 194078058 194078106 -9007426 + MIR SINE MIR 132 183 -79 4027 134 150 17 chr5 194078287 194079635 -9005897 + pTR5 LTR ERV1 741 2438 0 326 85 0 0 chr5 194080114 194080161 -9005371 - MADE1 DNA Mariner 0 80 34 360 291 60 71 chr5 194080162 194080344 -9005188 + L1ME4a LINE L1 5678 5857 -264 815 208 148 0 chr5 194080351 194080534 -9004998 - MIR SINE MIR -19 243 34 516 191 0 0 chr5 194080586 194080670 -9004862 + AluJb SINE Alu 124 207 -105 1248 122 24 0 chr5 194080680 194080885 -9004647 - L1MC1 LINE L1 -341 5992 5783 433 111 0 0 chr5 194080888 194080951 -9004581 + FLAM_C SINE Alu 73 135 -8 844 182 11 6 chr5 194081096 194081277 -9004255 - L1MC1 LINE L1 0 6333 6152 366 43 0 0 chr5 194081278 194081324 -9004208 - 5S rRNA rRNA -75 46 1 2443 129 4 84 chr5 194081324 194081398 -9004134 - L1MC1 LINE L1 -165 6168 6090 2356 102 0 0 chr5 194081398 194081692 -9003840 - AluSx SINE Alu -15 297 4 2443 129 4 84 chr5 194081692 194081848 -9003684 - L1MC1 LINE L1 -243 6090 5923 2410 58 0 7 chr5 194081848 194082140 -9003392 - AluY SINE Alu -21 290 1 2443 129 4 84 chr5 194082140 194082396 -9003136 - L1MC1 LINE L1 -410 5923 5720 2145 114 40 3 chr5 194082620 194082918 -9002614 - AluJb SINE Alu -3 309 1 562 134 6 128 chr5 194083106 194083209 -9002323 + Charlie1 DNA MER1_type 2611 2725 -36 2319 113 0 0 chr5 194083209 194083509 -9002023 - AluSx SINE Alu -12 300 1 1875 160 10 0 chr5 194083517 194083811 -9001721 - AluSx SINE Alu -15 297 1 562 134 6 128 chr5 194083811 194083870 -9001662 + Charlie1 DNA MER1_type 2732 2761 0 1663 148 26 0 chr5 194084136 194084400 -9001132 + AluJo SINE Alu 15 285 -27 324 211 0 0 chr5 194084406 194084477 -9001055 + (TATG)n Simple_repeat Simple_repeat 2 72 0 2318 107 0 0 chr5 194084560 194084851 -9000681 + AluSp SINE Alu 1 291 -22 287 206 55 3 chr5 194084880 194084973 -9000559 + L1ME3 LINE L1 6073 6160 -2 1099 289 77 39 chr5 194085090 194085831 -8999701 - L1ME3A LINE L1 -208 5962 5316 765 297 16 16 chr5 194085933 194086239 -8999293 - L2 LINE L2 -153 3160 2855 544 255 61 133 chr5 194086242 194086660 -8998872 - L1ME3A LINE L1 -863 5283 4927 1937 126 43 0 chr5 194086660 194086780 -8998752 + AluJb SINE Alu 1 114 -198 233 56 0 28 chr5 194086780 194086816 -8998716 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1937 126 43 0 chr5 194086816 194086972 -8998560 + AluJb SINE Alu 114 289 -23 544 255 61 133 chr5 194086972 194087205 -8998327 - L1ME3A LINE L1 -1219 4927 4679 1522 173 0 4 chr5 194087205 194087442 -8998090 + AluJb SINE Alu 1 236 -76 930 135 0 14 chr5 194087544 194087692 -8997840 + AluJb SINE Alu 167 312 0 262 230 37 52 chr5 194087693 194087828 -8997704 - L1ME3A LINE L1 -1457 4689 4557 622 189 0 0 chr5 194088051 194088157 -8997375 + FLAM_A SINE Alu 18 123 -19 1908 136 3 42 chr5 194089209 194089517 -8996015 - AluJo SINE Alu -16 296 1 2359 69 0 39 chr5 194089527 194089832 -8995700 - AluY SINE Alu -18 293 1 191 211 0 0 chr5 194089839 194089877 -8995655 + MIR SINE MIR 106 143 -119 296 252 43 58 chr5 194090522 194090723 -8994809 + MIR SINE MIR 16 254 -8 184 256 0 0 chr5 194090959 194091002 -8994530 + MIR SINE MIR 219 261 -1 596 253 84 25 chr5 194091088 194091290 -8994242 + MIR SINE MIR 28 241 -21 184 264 92 35 chr5 194091267 194091354 -8994178 - L2 LINE L2 -39 3233 3142 * 300 111 0 0 chr5 194093829 194093874 -8991658 + (CCA)n Simple_repeat Simple_repeat 2 46 0 296 330 11 0 chr5 194093915 194094003 -8991529 + MIR SINE MIR 102 190 -72 215 283 17 0 chr5 194094304 194094364 -8991168 + L2 LINE L2 3229 3289 -24 285 324 150 19 chr5 194094378 194094599 -8990933 + MIR3 SINE MIR 15 262 0 21 0 0 0 chr5 194095514 194095535 -8989997 + GC_rich Low_complexity Low_complexity 1 21 0 233 222 32 16 chr5 194096031 194096094 -8989438 - L2 LINE L2 -73 3199 3136 240 111 0 0 chr5 194096117 194096162 -8989370 + (A)n Simple_repeat Simple_repeat 1 45 0 369 0 0 0 chr5 194097962 194098003 -8987529 + (A)n Simple_repeat Simple_repeat 1 41 0 253 167 74 0 chr5 194098466 194098520 -8987012 + MER91B DNA MER1_type 5 62 -128 285 226 0 0 chr5 194101292 194101354 -8984178 + C-rich Low_complexity Low_complexity 4 65 0 299 213 21 102 chr5 194101576 194101722 -8983810 - MIR SINE MIR -58 150 20 248 214 43 29 chr5 194101924 194101994 -8983538 + CT-rich Low_complexity Low_complexity 5 75 0 2490 152 24 11 chr5 194102000 194102460 -8983072 - L1MB7 LINE L1 -8 6176 5711 680 207 127 0 chr5 194102545 194102695 -8982837 + MER45A DNA AcHobo 10 178 0 264 59 0 0 chr5 194102924 194102958 -8982574 + (TG)n Simple_repeat Simple_repeat 1 34 0 181 256 0 0 chr5 194103068 194103107 -8982425 - MIR SINE MIR -7 255 217 452 339 96 51 chr5 194103462 194103890 -8981642 + L1MC4a LINE L1 4886 5332 -814 347 294 166 23 chr5 194103921 194104350 -8981182 + L1MC4a LINE L1 5406 5895 -1913 192 277 21 64 chr5 194104528 194104622 -8980910 - MER5A DNA MER1_type -27 162 73 518 219 98 24 chr5 194105912 194106076 -8979456 - L1ME1 LINE L1 -5 6161 5986 2432 63 0 0 chr5 194107491 194107800 -8977732 - AluSq SINE Alu 0 309 1 21 0 0 0 chr5 194109008 194109029 -8976503 + AT_rich Low_complexity Low_complexity 1 21 0 2488 243 65 17 chr5 194110292 194111158 -8974374 - L1ME3A LINE L1 -76 6094 5180 1775 168 7 10 chr5 194111773 194112070 -8973462 - AluJb SINE Alu -8 304 9 879 184 0 7 chr5 194112070 194112217 -8973315 - AluJo SINE Alu -166 146 1 345 260 20 10 chr5 194112921 194113021 -8972511 + MIR SINE MIR 98 198 -64 2356 221 29 42 chr5 194113021 194113410 -8972122 + MLT1G LTR MaLR 10 403 -187 183 42 0 0 chr5 194113410 194113434 -8972098 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2356 221 29 42 chr5 194113434 194113452 -8972080 + MLT1G LTR MaLR 403 420 -170 1843 108 48 4 chr5 194113452 194113702 -8971830 - AluSx SINE Alu -47 265 5 2356 221 29 42 chr5 194113702 194113881 -8971651 + MLT1G LTR MaLR 420 589 -1 391 154 32 8 chr5 194114556 194114679 -8970853 + GA-rich Low_complexity Low_complexity 1 126 0 1263 191 32 0 chr5 194115080 194115363 -8970169 + L1MA7 LINE L1 5998 6289 -2 974 203 207 4 chr5 194115367 194115613 -8969919 + AluSx SINE Alu 1 296 -16 777 51 0 0 chr5 194115644 194115742 -8969790 - HY3 scRNA scRNA 0 101 4 284 257 145 0 chr5 194115884 194115984 -8969548 - MER5A DNA MER1_type -12 166 64 23 33 0 0 chr5 194115984 194116014 -8969518 + AT_rich Low_complexity Low_complexity 1 30 0 767 144 0 0 chr5 194116024 194116142 -8969390 - FLAM_C SINE Alu -15 118 1 589 185 231 21 chr5 194116710 194116925 -8968607 + MER33 DNA MER1_type 31 304 -2281 1813 166 9 35 chr5 194116925 194117244 -8968288 - AluJo SINE Alu -1 311 1 589 185 231 21 chr5 194117244 194117271 -8968261 + MER33 DNA MER1_type 304 324 0 487 308 23 9 chr5 194117339 194117553 -8967979 - L1MC4a LINE L1 -1886 5922 5706 320 295 23 31 chr5 194117665 194117794 -8967738 + MER94 DNA DNA 3 130 -4 204 405 59 7 chr5 194119048 194119201 -8966331 - L3 LINE CR1 -49 1528 1368 1766 177 0 10 chr5 194119210 194119510 -8966022 - AluJo SINE Alu -15 297 1 22 70 0 0 chr5 194120285 194120328 -8965204 + AT_rich Low_complexity Low_complexity 1 43 0 1054 227 131 19 chr5 194120513 194120888 -8964644 - MER47B DNA MER2_type 0 418 2 21 0 0 0 chr5 194120942 194120963 -8964569 + AT_rich Low_complexity Low_complexity 1 21 0 873 164 15 0 chr5 194121005 194121139 -8964393 - AluJo SINE Alu -176 136 1 414 211 33 11 chr5 194121287 194121377 -8964155 - MER5A DNA MER1_type -2 187 96 1243 121 0 0 chr5 194121393 194121567 -8963965 - AluSq SINE Alu 0 313 140 1138 184 0 11 chr5 194121697 194121887 -8963645 - AluJo SINE Alu -124 188 1 293 156 0 0 chr5 194121887 194121932 -8963600 + MLT1H LTR MaLR 125 169 -380 1707 108 3 119 chr5 194121935 194122230 -8963302 + AluJb SINE Alu 1 261 -51 253 111 0 0 chr5 194122234 194122270 -8963262 + MLT1H LTR MaLR 134 169 -380 2033 116 3 102 chr5 194122273 194122639 -8962893 + AluJb SINE Alu 1 332 0 564 261 39 43 chr5 194122643 194122888 -8962644 + MLT1H LTR MaLR 105 362 -180 687 108 83 0 chr5 194122892 194123012 -8962520 - MER20 DNA MER1_type -3 216 87 340 177 189 7 chr5 194123079 194123187 -8962345 + MLT1H LTR MaLR 399 550 -5 634 282 6 6 chr5 194123427 194123597 -8961935 + MIR SINE MIR 23 192 -70 1031 240 5 5 chr5 194123607 194123824 -8961708 - MER58A DNA MER1_type -4 220 4 989 162 60 0 chr5 194123937 194124104 -8961428 - AluJb SINE Alu -5 307 131 447 193 18 152 chr5 194124189 194124360 -8961172 + MLT1F LTR MaLR 1 148 -394 497 158 73 0 chr5 194124361 194124443 -8961089 - AluJ/FLAM SINE Alu -223 89 2 26 50 0 0 chr5 194125030 194125070 -8960462 + AT_rich Low_complexity Low_complexity 1 40 0 861 213 0 0 chr5 194125268 194125442 -8960090 - FAM SINE Alu -1 174 1 280 289 43 64 chr5 194125718 194125779 -8959753 + MIR SINE MIR 39 100 -162 2450 86 0 3 chr5 194125779 194126083 -8959449 + AluSx SINE Alu 1 303 -9 280 289 43 64 chr5 194126083 194126208 -8959324 + MIR SINE MIR 100 221 -41 545 292 78 32 chr5 194127279 194127498 -8958034 + MIR SINE MIR 28 256 -6 677 210 0 0 chr5 194127799 194127918 -8957614 - FRAM SINE Alu -56 120 2 240 254 30 52 chr5 194128106 194128163 -8957369 - L1ME4a LINE L1 -175 5946 5889 1810 155 10 20 chr5 194128163 194128460 -8957072 - AluJo SINE Alu -18 294 1 240 254 30 52 chr5 194128460 194128536 -8956996 - L1ME4a LINE L1 -232 5889 5816 499 158 11 0 chr5 194128681 194128776 -8956756 - FLAM_C SINE Alu -9 134 39 288 0 0 0 chr5 194130676 194130708 -8954824 + (T)n Simple_repeat Simple_repeat 1 32 0 1943 131 3 38 chr5 194131201 194131522 -8954010 - AluJo SINE Alu 0 314 4 25 65 0 0 chr5 194131705 194131751 -8953781 + AT_rich Low_complexity Low_complexity 1 46 0 2329 102 0 0 chr5 194131948 194132251 -8953281 + AluSx SINE Alu 1 303 -9 1754 152 0 28 chr5 194133088 194133371 -8952161 - AluJb SINE Alu -24 288 14 345 256 107 61 chr5 194133371 194133667 -8951865 - L1ME4a LINE L1 -177 5944 5632 468 251 58 40 chr5 194134148 194134448 -8951084 - MLT1J LTR MaLR -128 383 2 305 254 195 0 chr5 194134886 194135004 -8950528 - MIR SINE MIR -98 164 24 1636 141 38 8 chr5 194135042 194135304 -8950228 + AluJb SINE Alu 1 270 -42 2221 241 136 59 chr5 194135346 194136175 -8949357 - HAL1 LINE L1 -98 2409 1458 1716 174 3 25 chr5 194136175 194136491 -8949041 - AluJo SINE Alu -1 311 3 2221 241 136 59 chr5 194136491 194136863 -8948669 - HAL1 LINE L1 -1049 1458 1116 202 309 25 0 chr5 194236868 194236949 -8848583 + CT-rich Low_complexity Low_complexity 2 84 0 306 287 124 45 chr5 194236950 194237325 -8848207 - L1MCa LINE L1 -4928 1498 1167 325 242 25 33 chr5 194237452 194237572 -8847960 + CT-rich Low_complexity Low_complexity 3 121 0 300 137 0 0 chr5 194237576 194237627 -8847905 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 225 308 0 0 chr5 194237662 194237714 -8847818 + L2 LINE L2 3245 3296 -17 2925 152 31 6 chr5 194237943 194238463 -8847069 - L1MB3 LINE L1 -10 6173 5641 250 320 32 16 chr5 194238661 194238786 -8846746 + MIR SINE MIR 20 146 -116 227 301 60 38 chr5 194239169 194239302 -8846230 - L2 LINE L2 0 3272 3137 712 266 77 21 chr5 194239308 194239541 -8845991 - MIR SINE MIR 0 262 17 271 303 22 0 chr5 194239907 194239996 -8845536 - MIR SINE MIR -70 192 102 572 269 145 9 chr5 194240248 194240475 -8845057 + L2 LINE L2 3055 3312 -1 207 100 0 0 chr5 194240978 194241008 -8844524 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 532 279 14 7 chr5 194241010 194241150 -8844382 - L2 LINE L2 -6 3307 3167 200 35 35 0 chr5 194242314 194242343 -8843189 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2168 117 0 0 chr5 194242346 194242654 -8842878 - AluSq SINE Alu -5 308 1 454 316 48 6 chr5 194242915 194243083 -8842449 - MIR SINE MIR -43 219 45 206 304 27 0 chr5 194243093 194243205 -8842327 + (TA)n Simple_repeat Simple_repeat 2 116 0 375 213 18 104 chr5 194243262 194243426 -8842106 + L1MCa LINE L1 1915 2064 -4362 * 384 245 89 12 chr5 194243387 194243517 -8842015 - L1MC4 LINE L1 -1340 6982 1995 377 307 51 15 chr5 194243441 194243518 -8842014 + L1MC4 LINE L1 6614 6700 -1342 * 1815 80 0 4 chr5 194243518 194243755 -8841777 - AluSc SINE Alu -21 288 53 377 307 51 15 chr5 194243755 194243814 -8841718 + L1MC4 LINE L1 6700 6755 -1287 188 204 45 114 chr5 194244391 194244479 -8841053 - L2 LINE L2 -7 3265 3184 202 309 82 27 chr5 194244616 194244726 -8840806 + L3 LINE CR1 1462 1577 0 505 274 51 77 chr5 194245398 194245632 -8839900 - MIR SINE MIR 0 262 35 290 309 21 11 chr5 194246632 194246726 -8838806 + MIR SINE MIR 162 256 -6 386 319 50 0 chr5 194247013 194247154 -8838378 + MIR SINE MIR 107 254 -8 310 232 24 37 chr5 194247172 194247254 -8838278 + L1ME4a LINE L1 6037 6117 -4 1993 140 7 0 chr5 194250215 194250522 -8835010 + AluSx SINE Alu 3 311 -1 423 324 115 55 chr5 194250697 194251166 -8834366 - MLT1L LTR MaLR 0 615 119 2777 3 3 0 chr5 194251490 194251800 -8833732 - AluYa5 SINE Alu 0 311 1 532 288 0 14 chr5 194251812 194251951 -8833581 + MIR SINE MIR 47 183 -79 900 223 268 18 chr5 194253835 194254171 -8831361 + MLT1K LTR MaLR 1 420 -168 1173 164 14 5 chr5 194254172 194254386 -8831146 + AluJb SINE Alu 82 297 -15 547 213 29 75 chr5 194254386 194254560 -8830972 + MLT1K LTR MaLR 415 580 -8 4506 141 10 25 chr5 194255382 194255956 -8829576 - L1MB3 LINE L1 0 6183 5621 2311 100 0 0 chr5 194255956 194256265 -8829267 - AluSg SINE Alu -1 309 1 4506 141 10 25 chr5 194256265 194256462 -8829070 - L1MB3 LINE L1 -562 5621 5423 192 258 76 15 chr5 194256651 194256717 -8828815 - MIR3 SINE MIR -31 177 108 410 354 116 14 chr5 194256722 194256937 -8828595 + MIR SINE MIR 13 249 -13 197 369 12 24 chr5 194257400 194257484 -8828048 - L2 LINE L2 0 3313 3231 324 336 10 9 chr5 194257788 194258010 -8827522 + L1MC4a LINE L1 5731 5839 -331 2077 156 0 78 chr5 194258054 194258477 -8827055 - MLT1B LTR MaLR 0 390 1 879 271 116 20 chr5 194259022 194259445 -8826087 - MLT1F1 LTR MaLR -44 505 60 245 188 188 0 chr5 194259416 194259480 -8826052 - MLT1H1 LTR MaLR -371 219 144 * 2417 226 20 43 chr5 194259489 194260043 -8825489 - MLT1F1 LTR MaLR 0 567 27 493 224 70 20 chr5 194260052 194260184 -8825348 - MLT1H1 LTR MaLR -369 180 17 1366 214 69 44 chr5 194260184 194260548 -8824984 - MLT1A2 LTR MaLR 0 374 2 705 164 79 0 chr5 194260549 194260689 -8824843 - MLT1A2-int LTR MaLR 0 1735 1585 366 327 153 0 chr5 194260701 194260924 -8824608 - LTR16C LTR ERVL -68 423 167 542 285 0 54 chr5 194261209 194261395 -8824137 - L2 LINE L2 0 3313 3138 635 277 48 24 chr5 194261691 194261897 -8823635 + MLT1L LTR MaLR 405 615 0 327 272 177 20 chr5 194261898 194262045 -8823487 - MIR SINE MIR -60 202 33 385 323 146 9 chr5 194262403 194262623 -8822909 + L1ME4a LINE L1 5848 6097 -24 912 281 13 17 chr5 194262694 194262925 -8822607 + MIR SINE MIR 1 230 -32 259 237 178 17 chr5 194262990 194263108 -8822424 + L3 LINE CR1 1259 1395 -182 234 197 26 105 chr5 194263626 194263702 -8821830 - MIR3 SINE MIR -14 194 125 813 232 17 6 chr5 194264041 194264222 -8821310 - MER58A DNA MER1_type -18 206 24 554 336 36 28 chr5 194264270 194264520 -8821012 + MIR SINE MIR 6 257 -5 203 156 0 0 chr5 194264523 194264555 -8820977 + (CAT)n Simple_repeat Simple_repeat 3 34 0 190 360 7 50 chr5 194264749 194264888 -8820644 - MIR3 SINE MIR -71 137 5 913 316 105 14 chr5 194265366 194265860 -8819672 + L2 LINE L2 35 573 -2741 813 229 11 11 chr5 194265891 194266066 -8819466 - MIR SINE MIR -4 258 84 3333 142 50 3 chr5 194266086 194266664 -8818868 + L1MA8 LINE L1 5668 6272 -19 25 31 0 0 chr5 194266668 194266700 -8818832 + AT_rich Low_complexity Low_complexity 1 32 0 203 277 21 0 chr5 194266700 194266747 -8818785 - MIR SINE MIR -202 60 13 667 262 87 13 chr5 194266769 194266998 -8818534 + L2 LINE L2 586 831 -2483 1242 201 12 87 chr5 194266998 194267332 -8818200 + MLT1A2 LTR MaLR 1 309 -65 1983 259 194 8 chr5 194267348 194268194 -8817338 + L2 LINE L2 1002 2004 -1310 1517 255 122 17 chr5 194268554 194269146 -8816386 + L2 LINE L2 2003 2656 -658 1177 238 174 28 chr5 194269150 194269575 -8815957 - MLT1D LTR MaLR 0 505 19 731 302 93 26 chr5 194269594 194270200 -8815332 + L2 LINE L2 2656 3308 -5 296 261 188 29 chr5 194270586 194270724 -8814808 - MLT1K LTR MaLR -17 571 412 394 323 57 0 chr5 194272071 194272195 -8813337 + MIR SINE MIR 30 160 -102 373 186 23 68 chr5 194272209 194272386 -8813146 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 328 203 0 0 chr5 194272533 194272592 -8812940 + MLT1I LTR MaLR 82 140 -269 447 305 209 41 chr5 194273084 194273760 -8811772 - L2 LINE L2 -16 3297 2510 3037 127 21 118 chr5 194274067 194274357 -8811175 + L1MA9 LINE L1 5512 5829 -483 258 105 0 0 chr5 194274357 194274395 -8811137 + (TG)n Simple_repeat Simple_repeat 2 39 0 3037 127 21 118 chr5 194274395 194274410 -8811122 + L1MA9 LINE L1 5829 5844 -468 1967 85 0 35 chr5 194274410 194274692 -8810840 + AluSc SINE Alu 1 272 -37 3037 127 21 118 chr5 194274692 194274704 -8810828 + L1MA9 LINE L1 5844 5856 -456 468 48 0 0 chr5 194274704 194274767 -8810765 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2937 123 9 9 chr5 194274767 194275190 -8810342 + MSTB LTR MaLR 4 426 0 3037 127 21 118 chr5 194275190 194275549 -8809983 + L1MA9 LINE L1 5854 6125 -187 214 297 176 0 chr5 194276181 194276272 -8809260 + L2 LINE L2 3139 3245 -27 181 301 68 39 chr5 194276716 194276819 -8808713 + L2 LINE L2 2957 3062 -251 633 289 50 5 chr5 194276878 194277079 -8808453 + MIR SINE MIR 14 223 -39 1744 150 3 20 chr5 194277986 194278292 -8807240 + AluJo SINE Alu 1 301 -11 2032 119 3 0 chr5 194279423 194279716 -8805816 + AluSx SINE Alu 1 294 -18 525 307 103 33 chr5 194279779 194280108 -8805424 + MLT1K LTR MaLR 227 578 -10 354 158 13 26 chr5 194280255 194280331 -8805201 + L1MB4 LINE L1 5447 5521 -645 234 254 17 0 chr5 194280592 194280651 -8804881 + MIR SINE MIR 92 151 -111 600 50 0 0 chr5 194281512 194281592 -8803940 + (TG)n Simple_repeat Simple_repeat 2 81 0 561 261 11 60 chr5 194281698 194281840 -8803692 + L1ME3 LINE L1 5988 6121 -41 2836 167 25 24 chr5 194281840 194282392 -8803140 + L1MB4 LINE L1 5621 6173 -7 561 261 11 60 chr5 194282392 194282433 -8803099 + L1ME3 LINE L1 6121 6162 0 829 150 0 23 chr5 194282450 194282567 -8802965 + FLAM_A SINE Alu 10 125 -186 1561 174 18 4 chr5 194282567 194282848 -8802684 - AluJb SINE Alu -26 286 2 829 150 0 23 chr5 194282848 194282863 -8802669 + FLAM_A SINE Alu 125 139 -172 34 24 0 0 chr5 194282865 194282906 -8802626 + AT_rich Low_complexity Low_complexity 1 41 0 180 267 22 0 chr5 194283016 194283061 -8802471 - MIR SINE MIR -189 73 28 254 284 47 71 chr5 194283596 194283723 -8801809 - MIR3 SINE MIR -4 204 81 506 245 41 20 chr5 194283723 194283870 -8801662 + MIR SINE MIR 47 196 -66 223 300 13 36 chr5 194283943 194284040 -8801492 - MIR SINE MIR -75 133 65 430 235 74 62 chr5 194284450 194284612 -8800920 - MIR SINE MIR -10 252 89 242 333 46 9 chr5 194284683 194284791 -8800741 + L2 LINE L2 2925 3036 -236 1330 130 5 0 chr5 194284963 194285170 -8800362 + AluJb SINE Alu 94 301 -11 447 165 55 0 chr5 194285228 194285319 -8800213 + L1MA9 LINE L1 5740 5835 -477 570 194 0 0 chr5 194285319 194285417 -8800115 - MLT1B LTR MaLR -292 98 1 2075 138 36 48 chr5 194286475 194286867 -8798665 + MLT1B LTR MaLR 1 387 -3 370 316 53 0 chr5 194287337 194287451 -8798081 - MIR SINE MIR -126 136 17 2506 197 15 15 chr5 194287824 194288296 -8797236 + MER70A LTR ERVL 1 472 0 183 275 101 14 chr5 194288436 194288505 -8797027 - MIR SINE MIR -88 120 46 255 283 142 40 chr5 194288544 194288770 -8796762 + L1MC4a LINE L1 5886 6134 -1674 2234 76 3 0 chr5 194288795 194289083 -8796449 + AluSp SINE Alu 1 289 -24 329 260 0 67 chr5 194289083 194289181 -8796351 + L1MC4 LINE L1 6613 6703 -1339 321 211 167 44 chr5 194289116 194289230 -8796302 - L1MCa LINE L1 -4365 2061 1934 * 367 252 102 14 chr5 194289231 194289378 -8796154 + L1ME4a LINE L1 5961 6120 -1 1727 193 50 19 chr5 194289975 194290353 -8795179 + MLT1B LTR MaLR 1 390 0 788 168 8 8 chr5 194290871 194291002 -8794530 + FLAM_C SINE Alu 3 133 0 1280 250 78 12 chr5 194292319 194292663 -8792869 - MLT1J LTR MaLR -45 466 100 338 219 62 42 chr5 194293744 194293840 -8791692 - MER103 DNA DNA -51 115 18 890 243 16 5 chr5 194293952 194294141 -8791391 + MIR SINE MIR 29 219 -43 317 167 13 0 chr5 194294154 194294232 -8791300 + (ATG)n Simple_repeat Simple_repeat 3 81 0 273 287 149 0 chr5 194294285 194294372 -8791160 + L2 LINE L2 3171 3270 -2 202 224 15 45 chr5 194294751 194294818 -8790714 + GA-rich Low_complexity Low_complexity 2 66 0 2644 112 0 3 chr5 194295203 194295568 -8789964 - THE1B LTR MaLR 0 364 1 440 274 141 38 chr5 194295933 194296280 -8789252 + L2 LINE L2 2886 3268 -45 309 254 110 34 chr5 194296598 194296716 -8788816 + L1MC3 LINE L1 6937 7063 -722 23 68 0 0 chr5 194296742 194296786 -8788746 + AT_rich Low_complexity Low_complexity 1 44 0 375 121 0 0 chr5 194297068 194297126 -8788406 + (CA)n Simple_repeat Simple_repeat 1 58 0 315 100 283 0 chr5 194297139 194297199 -8788333 + MLT1K LTR MaLR 154 230 -358 2644 134 37 23 chr5 194297246 194297428 -8788104 - Tigger2 DNA MER2_type 0 2718 2540 2191 99 0 3 chr5 194297428 194297731 -8787801 - AluSx SINE Alu -10 302 1 2644 134 37 23 chr5 194297731 194297981 -8787551 - Tigger2 DNA MER2_type -178 2540 2280 416 123 0 0 chr5 194297990 194298047 -8787485 + MER8 DNA MER2_type 182 238 -1 600 242 113 5 chr5 194298063 194298249 -8787283 + MLT1K LTR MaLR 336 541 -47 475 261 134 42 chr5 194298543 194298804 -8786728 + LTR16A1 LTR ERVL 149 433 -24 476 244 89 75 chr5 194299498 194299832 -8785700 + MLT1K LTR MaLR 3 394 -194 310 174 0 72 chr5 194299881 194299950 -8785582 + MLT1K LTR MaLR 521 584 -4 262 285 252 13 chr5 194299965 194300116 -8785416 + MIR3 SINE MIR 1 187 -21 312 337 16 57 chr5 194300347 194300540 -8784992 - MIR SINE MIR -22 240 56 1246 282 73 21 chr5 194302335 194302995 -8782537 + L1ME4a LINE L1 5258 5951 -170 42019 35 26 1 chr5 194303106 194308157 -8777375 + L1PA3 LINE L1 1 5177 -969 3093 3 0 0 chr5 194308257 194308595 -8776937 + L1HS LINE L1 5818 6155 0 3649 29 0 0 chr5 194309164 194309584 -8775948 + L1PA3 LINE L1 5736 6155 0 266 139 23 0 chr5 194309618 194309661 -8775871 + L2 LINE L2 3267 3310 -3 1983 119 0 23 chr5 194310713 194311015 -8774517 + AluSx SINE Alu 1 295 -17 2094 106 0 0 chr5 194313232 194313525 -8772007 + AluSc SINE Alu 1 293 -16 574 274 27 27 chr5 194316084 194316298 -8769234 + Charlie8 DNA MER1_type 33 246 -2171 654 247 89 33 chr5 194316298 194316730 -8768802 - MLT1H LTR MaLR 0 549 12 2408 109 28 11 chr5 194316825 194316865 -8768667 - THE1B LTR MaLR 0 364 326 2240 102 0 0 chr5 194316865 194317159 -8768373 + AluSx SINE Alu 1 294 -18 2408 109 28 11 chr5 194317159 194317476 -8768056 - THE1B LTR MaLR -38 326 1 24 53 0 0 chr5 194318259 194318297 -8767235 + AT_rich Low_complexity Low_complexity 1 38 0 644 261 79 59 chr5 194318317 194318788 -8766744 + L1MC5 LINE L1 7261 7740 -221 824 228 294 6 chr5 194318792 194319152 -8766380 + LTR50 LTR ERVL 3 466 -329 539 194 86 57 chr5 194319148 194319323 -8766209 + LTR50 LTR ERVL 592 771 -24 * 2088 126 0 7 chr5 194319643 194319953 -8765579 + AluSx SINE Alu 1 308 -4 428 278 133 0 chr5 194320252 194320432 -8765100 - L3b LINE CR1 -69 1514 1311 707 351 20 22 chr5 194321198 194321648 -8763884 + L1MC4 LINE L1 5373 5821 -1987 3082 246 53 52 chr5 194321656 194322733 -8762799 + L1MC4 LINE L1 6731 7812 -230 1551 199 14 7 chr5 194322733 194323030 -8762502 + AluJb SINE Alu 2 300 -12 3082 246 53 52 chr5 194323030 194323131 -8762401 + L1MC4 LINE L1 7812 7911 -131 234 193 0 0 chr5 194323154 194323211 -8762321 + (CATA)n Simple_repeat Simple_repeat 2 58 0 361 181 135 75 chr5 194323212 194323345 -8762187 + L1MC4 LINE L1 7902 8042 0 5322 68 4 1 chr5 194323659 194324340 -8761192 + L1PA13 LINE L1 5480 6162 -1 281 315 71 8 chr5 194324634 194324761 -8760771 + MIR SINE MIR 71 205 -57 751 162 0 63 chr5 194324843 194324985 -8760547 - FLAM_C SINE Alu 0 133 1 587 228 22 0 chr5 194325378 194325514 -8760018 + MER103 DNA DNA 1 139 -27 501 268 56 81 chr5 194325529 194325866 -8759666 - L2 LINE L2 -277 3036 2692 189 135 0 27 chr5 194325870 194325907 -8759625 + MIR SINE MIR 120 155 -107 2013 143 0 0 chr5 194325954 194326255 -8759277 + AluSx SINE Alu 1 301 -11 770 237 40 0 chr5 194326263 194326440 -8759092 - MER5A DNA MER1_type -5 184 1 477 302 99 40 chr5 194326443 194326797 -8758735 - L2 LINE L2 -653 2661 2287 229 273 82 82 chr5 194326805 194326915 -8758617 + L2 LINE L2 3162 3271 -1 1953 122 13 3 chr5 194327900 194328204 -8757328 + AluSq SINE Alu 1 307 -6 2097 127 0 0 chr5 194328705 194329012 -8756520 + AluSx SINE Alu 1 307 -5 505 242 23 30 chr5 194329083 194329215 -8756317 - MIR SINE MIR -108 154 24 2462 74 0 0 chr5 194329868 194330179 -8755353 + AluY SINE Alu 1 311 0 793 234 110 32 chr5 194330718 194330936 -8754596 + MIR SINE MIR 16 250 -12 809 216 36 22 chr5 194331018 194331240 -8754292 - MLT1K LTR MaLR -76 512 288 567 271 107 35 chr5 194332540 194332601 -8752931 - MLT1I LTR MaLR 0 409 354 1563 186 0 21 chr5 194332601 194332919 -8752613 - AluJo SINE Alu 0 312 1 567 271 107 35 chr5 194332919 194333193 -8752339 - MLT1I LTR MaLR -55 354 14 180 294 120 33 chr5 194333850 194333942 -8751590 - MIR SINE MIR -78 184 85 1285 194 5 0 chr5 194333948 194334165 -8751367 - MLT1A1 LTR MaLR 0 365 148 1739 177 0 7 chr5 194334165 194334488 -8751044 - AluJb SINE Alu 0 321 1 504 295 143 23 chr5 194335217 194335434 -8750098 + MIR SINE MIR 2 244 -18 263 345 92 18 chr5 194335437 194335578 -8749954 - MIR SINE MIR -65 143 1 1885 139 10 0 chr5 194336523 194336817 -8748715 - AluJo SINE Alu -15 297 1 563 269 67 16 chr5 194336817 194337010 -8748522 - MIR SINE MIR -8 254 52 2415 157 31 63 chr5 194337654 194337720 -8747812 - MLT1D LTR MaLR -1 504 437 2123 110 10 0 chr5 194337720 194338020 -8747512 + AluSx SINE Alu 1 303 -9 2415 157 31 63 chr5 194338020 194338474 -8747058 - MLT1D LTR MaLR -68 437 1 396 242 90 22 chr5 194339018 194339241 -8746291 + MER113 DNA MER1_type? 5 242 -279 216 196 20 39 chr5 194339279 194339330 -8746202 - MER5A DNA MER1_type -6 183 134 561 293 78 4 chr5 194339553 194339893 -8745639 + MLT1I LTR MaLR 9 400 -9 1566 284 5 19 chr5 194340451 194340874 -8744658 - MLT1K LTR MaLR -132 456 40 1832 187 87 42 chr5 194341234 194341715 -8743817 + MLT1D LTR MaLR 1 503 -2 548 264 156 6 chr5 194341792 194341959 -8743573 - MLT1K LTR MaLR -384 204 13 1253 161 70 80 chr5 194341963 194342109 -8743423 + AluJo SINE Alu 1 147 -165 2257 104 0 0 chr5 194342109 194342418 -8743114 + AluSc SINE Alu 1 309 0 1253 161 70 80 chr5 194342418 194342570 -8742962 + AluJo SINE Alu 147 296 -16 21 57 0 0 chr5 194342921 194342956 -8742576 + AT_rich Low_complexity Low_complexity 1 35 0 551 260 77 4 chr5 194343196 194343461 -8742071 - L1ME LINE L1 -702 5460 5173 189 74 0 0 chr5 194343486 194343513 -8742019 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2971 106 0 0 chr5 194343935 194344127 -8741405 + L1PA15 LINE L1 5132 5311 -854 2971 129 11 2 chr5 194344127 194344578 -8740954 + L1PA15 LINE L1 5709 6163 -2 2971 106 0 0 chr5 194344578 194345421 -8740111 + L1PA15 LINE L1 5311 6165 0 273 235 106 38 chr5 194345501 194345633 -8739899 + L1M4 LINE L1 4942 5082 -1064 1318 249 123 47 chr5 194345731 194346258 -8739274 - MLT1L LTR MaLR -38 577 11 1009 246 18 5 chr5 194346358 194346578 -8738954 - MER58A DNA MER1_type 0 224 2 415 247 0 0 chr5 194347599 194347676 -8737856 - L2 LINE L2 -3 3269 3193 1879 121 14 7 chr5 194347718 194347998 -8737534 + AluJb SINE Alu 14 295 -17 660 251 63 54 chr5 194348105 194348525 -8737007 - MLT1D LTR MaLR 0 467 1 375 309 58 69 chr5 194348530 194348853 -8736679 - L2 LINE L2 -217 3096 2769 797 151 8 0 chr5 194348853 194348979 -8736553 + FLAM_C SINE Alu 1 127 -16 24 0 0 0 chr5 194348989 194349013 -8736519 + AT_rich Low_complexity Low_complexity 1 24 0 242 258 16 16 chr5 194349021 194349083 -8736449 - L2 LINE L2 -536 2778 2717 694 125 0 0 chr5 194349240 194349336 -8736196 + U6 snRNA snRNA 1 96 -11 1465 172 54 98 chr5 194349408 194349816 -8735716 + MLT1B LTR MaLR 1 390 0 270 73 0 0 chr5 194351000 194351041 -8734491 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 2357 173 65 23 chr5 194351407 194352010 -8733522 - Charlie2 DNA MER1_type -5 2857 2230 510 291 108 35 chr5 194352079 194352282 -8733250 - Charlie2 DNA MER1_type -2558 224 7 1933 157 36 134 chr5 194352425 194352985 -8732547 + MLT1D LTR MaLR 1 505 0 1485 87 0 19 chr5 194353241 194353447 -8732085 - AluSx SINE Alu -110 202 1 771 207 115 6 chr5 194354079 194354273 -8731259 - MIR SINE MIR 0 262 49 338 369 0 11 chr5 194354586 194354765 -8730767 + (TG)n Simple_repeat Simple_repeat 1 177 0 203 252 187 9 chr5 194356209 194356316 -8729216 - MIR SINE MIR -56 152 27 188 200 73 55 chr5 194356544 194356599 -8728933 - MIR SINE MIR -8 254 199 850 129 15 0 chr5 194356851 194356983 -8728549 + AluJo SINE Alu 2 135 -177 623 113 0 172 chr5 194357015 194357101 -8728431 + L1MB3 LINE L1 6056 6107 -76 1550 163 0 21 chr5 194357101 194357389 -8728143 + AluJo SINE Alu 1 282 -30 623 113 0 172 chr5 194357389 194357453 -8728079 + L1MB3 LINE L1 6107 6180 -3 1464 167 0 57 chr5 194357467 194357799 -8727733 + AluJo SINE Alu 1 315 0 920 273 43 24 chr5 194357907 194358160 -8727372 - MIR SINE MIR -4 258 1 1352 213 13 89 chr5 194359879 194359949 -8725583 - MLT1A1 LTR MaLR 0 365 291 16480 105 30 9 chr5 194359949 194360051 -8725481 - Tigger1 DNA MER2_type 0 2418 2320 2076 103 24 0 chr5 194360051 194360342 -8725190 + AluSp SINE Alu 1 298 -15 16480 105 30 9 chr5 194360342 194362606 -8722926 - Tigger1 DNA MER2_type -98 2320 3 1352 213 13 89 chr5 194362606 194362790 -8722742 - MLT1A1 LTR MaLR -74 291 149 2102 108 0 7 chr5 194362790 194363086 -8722446 + AluSp SINE Alu 1 294 -19 1352 213 13 89 chr5 194363086 194363225 -8722307 - MLT1A1 LTR MaLR -216 149 1 273 119 0 0 chr5 194363390 194363432 -8722100 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1769 152 0 14 chr5 194363434 194363723 -8721809 - AluJo SINE Alu -27 285 1 253 252 78 39 chr5 194363790 194363893 -8721639 - L2 LINE L2 -3 3310 3204 4046 141 71 11 chr5 194364084 194364800 -8720732 + Tigger2 DNA MER2_type 1 759 -1959 1178 103 12 206 chr5 194364857 194365097 -8720435 + Tigger2 DNA MER2_type 2461 2625 -93 2118 135 143 8 chr5 194365097 194365474 -8720058 + MSTA LTR MaLR 1 428 0 1178 103 12 206 chr5 194365474 194365553 -8719979 + Tigger2 DNA MER2_type 2625 2718 0 1903 163 31 17 chr5 194365577 194365927 -8719605 - MLT2C1 LTR ERVL -42 355 1 2076 124 0 0 chr5 194366979 194367270 -8718262 + AluSx SINE Alu 1 291 -21 784 208 19 0 chr5 194367457 194367616 -8717916 - MIR SINE MIR -59 203 42 217 342 53 0 chr5 194367616 194367692 -8717840 - MIR SINE MIR -137 125 46 2399 120 83 10 chr5 194367741 194368140 -8717392 + MSTA LTR MaLR 1 428 0 824 137 0 8 chr5 194368666 194368790 -8716742 - FLAM_C SINE Alu -19 124 2 769 185 40 35 chr5 194369520 194369720 -8715812 - MER113 DNA MER1_type? -303 218 18 294 271 136 70 chr5 194370954 194371095 -8714437 + L2 LINE L2 2725 2855 -417 2583 143 34 0 chr5 194371095 194371507 -8714025 - MSTC LTR MaLR 0 428 3 294 271 136 70 chr5 194371507 194371810 -8713722 + L2 LINE L2 2855 3270 -2 536 326 52 22 chr5 194372511 194372741 -8712791 - MIR SINE MIR -6 256 20 486 0 0 0 chr5 194373304 194373358 -8712174 + (TA)n Simple_repeat Simple_repeat 1 54 0 385 275 88 29 chr5 194373493 194373664 -8711868 + MIR SINE MIR 32 212 -50 243 133 0 0 chr5 194373863 194373908 -8711624 + (CA)n Simple_repeat Simple_repeat 2 46 0 335 255 0 128 chr5 194373915 194374064 -8711468 - L2 LINE L2 -35 3278 3149 2380 62 0 10 chr5 194374162 194374466 -8711066 + AluY SINE Alu 1 301 -10 1311 92 0 0 chr5 194374473 194374646 -8710886 + AluSq SINE Alu 134 306 -7 240 173 120 27 chr5 194375341 194375416 -8710116 + MLT1L LTR MaLR 511 592 -23 368 313 75 67 chr5 194375523 194375897 -8709635 + L2 LINE L2 2896 3272 0 6808 174 45 35 chr5 194376265 194377805 -8707727 - Looper DNA T2_type 0 1558 4 1824 126 0 11 chr5 194378627 194378896 -8706636 - AluJo SINE Alu -18 294 29 211 314 0 19 chr5 194381679 194381784 -8703748 + G-rich Low_complexity Low_complexity 2 104 0 210 286 0 0 chr5 194382795 194382851 -8702681 + (CACG)n Simple_repeat Simple_repeat 3 58 0 266 153 17 0 chr5 194383189 194383248 -8702284 + GA-rich Low_complexity Low_complexity 3 62 0 644 228 137 64 chr5 194388636 194388855 -8696677 - MIR SINE MIR -10 252 18 22 0 0 0 chr5 194389178 194389200 -8696332 + AT_rich Low_complexity Low_complexity 1 22 0 288 309 89 0 chr5 194389688 194389811 -8695721 - MIR SINE MIR -31 231 98 187 222 0 0 chr5 194393011 194393047 -8692485 + MIR SINE MIR 221 256 -6 324 0 0 0 chr5 194393195 194393231 -8692301 + (TC)n Simple_repeat Simple_repeat 2 37 0 943 226 27 23 chr5 194395140 194395361 -8690171 - MER58A DNA MER1_type -2 222 1 573 278 141 26 chr5 194397269 194397460 -8688072 - MIR SINE MIR -22 240 28 273 248 43 77 chr5 194397949 194398066 -8687466 - MIR SINE MIR -101 161 49 440 201 298 24 chr5 194398942 194399117 -8686415 - MLT1G LTR MaLR 0 590 320 284 162 14 68 chr5 194399341 194399415 -8686117 + L2 LINE L2 3188 3257 -56 249 83 0 0 chr5 194399431 194399467 -8686065 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 263 294 20 103 chr5 194399741 194399945 -8685587 + MIR SINE MIR 76 262 0 192 77 0 0 chr5 194400542 194400568 -8684964 + (GGA)n Simple_repeat Simple_repeat 2 27 0 599 288 143 25 chr5 194401761 194402167 -8683365 - LTR16B LTR ERVL -7 457 4 210 37 0 0 chr5 194402187 194402214 -8683318 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 286 250 0 0 chr5 194402478 194402546 -8682986 + Charlie8 DNA MER1_type 113 180 -2237 2291 231 125 24 chr5 194402685 194403484 -8682048 + HAL1 LINE L1 1022 1901 -606 2835 228 56 42 chr5 194403556 194403823 -8681709 + L1ME3 LINE L1 5318 5580 -582 1959 132 0 26 chr5 194403823 194404155 -8681377 - AluSx SINE Alu 0 312 1 2835 228 56 42 chr5 194404155 194404710 -8680822 + L1ME3 LINE L1 5580 6151 -11 742 257 29 82 chr5 194404730 194405142 -8680390 + HAL1 LINE L1 2012 2401 -106 994 249 46 88 chr5 194405181 194405252 -8680280 - MLT1J LTR MaLR -4 507 435 2165 110 3 0 chr5 194405252 194405560 -8679972 + AluSq SINE Alu 1 309 -4 994 249 46 88 chr5 194405560 194405966 -8679566 - MLT1J LTR MaLR -76 435 50 281 253 55 22 chr5 194406350 194406441 -8679091 - MIR SINE MIR -81 181 88 657 99 0 11 chr5 194407869 194407960 -8677572 - AluJ/FLAM SINE Alu -211 101 12 219 295 39 0 chr5 194408365 194408443 -8677089 + GA-rich Low_complexity Low_complexity 3 83 0 668 216 115 154 chr5 194408470 194408662 -8676870 - MLT1K LTR MaLR -115 473 275 369 62 0 0 chr5 194408662 194408710 -8676822 + (CA)n Simple_repeat Simple_repeat 2 49 0 668 216 115 154 chr5 194408710 194408985 -8676547 - MLT1K LTR MaLR -313 275 24 654 205 0 0 chr5 194409982 194410094 -8675438 + FLAM_C SINE Alu 1 112 -31 324 120 0 0 chr5 194410097 194410147 -8675385 + (GGAGA)n Simple_repeat Simple_repeat 2 51 0 476 110 0 24 chr5 194410249 194410331 -8675201 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 24 0 0 0 chr5 194410745 194410769 -8674763 + AT_rich Low_complexity Low_complexity 1 24 0 726 253 128 22 chr5 194410957 194411328 -8674204 - MLT1K LTR MaLR 0 588 156 1586 123 4 12 chr5 194411397 194411649 -8673883 + AluJo SINE Alu 2 251 -61 560 246 62 28 chr5 194411697 194411911 -8673621 + MIR SINE MIR 16 235 -27 208 233 0 0 chr5 194412283 194412326 -8673206 + GA-rich Low_complexity Low_complexity 1 43 0 517 281 91 83 chr5 194414445 194414698 -8670834 + MIR SINE MIR 8 262 0 833 209 123 14 chr5 194414982 194415202 -8670330 + MIR SINE MIR 13 256 -6 1315 25 0 0 chr5 194415518 194415675 -8669857 - L1PA4 LINE L1 0 6155 5999 221 357 50 21 chr5 194416237 194416377 -8669155 + L2 LINE L2 2906 3049 -223 292 303 37 9 chr5 194416665 194416774 -8668758 - MIR SINE MIR -119 143 32 830 91 0 76 chr5 194417345 194417477 -8668055 + AluJb SINE Alu 3 124 -188 428 329 99 14 chr5 194417806 194418019 -8667513 + MIR SINE MIR 22 252 -10 2293 80 7 0 chr5 194418039 194418339 -8667193 - AluSx SINE Alu -10 302 1 496 242 19 57 chr5 194418378 194418535 -8666997 - MLT1K LTR MaLR -24 564 414 * 527 211 0 0 chr5 194418531 194418621 -8666911 + 5S rRNA rRNA 1 90 -31 * 753 223 27 27 chr5 194418618 194418806 -8666726 - MLT1K LTR MaLR -153 435 248 434 263 73 29 chr5 194419043 194419180 -8666352 + MIR3 SINE MIR 17 159 -49 256 230 254 38 chr5 194419187 194419368 -8666164 - MER102a DNA MER1_type -1100 317 84 493 164 82 0 chr5 194419368 194419478 -8666054 + L1MB8 LINE L1 6051 6169 -9 256 230 254 38 chr5 194419478 194419505 -8666027 - MER102a DNA MER1_type -1333 84 64 1598 207 52 3 chr5 194419507 194419853 -8665679 + L1MB5 LINE L1 5801 6174 0 186 43 0 0 chr5 194420143 194420166 -8665366 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1429 164 3 67 chr5 194420991 194421290 -8664242 + AluJb SINE Alu 1 280 -32 476 198 0 9 chr5 194421395 194421511 -8664021 + GA-rich Low_complexity Low_complexity 4 118 0 210 191 0 43 chr5 194421513 194421560 -8663972 - MIR SINE MIR -68 194 150 292 207 219 0 chr5 194421565 194421647 -8663885 - Charlie8 DNA MER1_type -2244 173 74 520 211 133 0 chr5 194421666 194421794 -8663738 - MIR SINE MIR -114 148 4 640 209 153 48 chr5 194421839 194422004 -8663528 - Charlie8 DNA MER1_type -55 275 74 839 145 0 36 chr5 194422004 194422142 -8663390 + FLAM_C SINE Alu 1 133 0 640 209 153 48 chr5 194422142 194422225 -8663307 - Charlie8 DNA MER1_type -256 74 1 490 276 82 23 chr5 194422321 194422497 -8663035 + MIR SINE MIR 13 191 -41 23 0 0 0 chr5 194422827 194422850 -8662682 + AT_rich Low_complexity Low_complexity 1 23 0 308 296 122 30 chr5 194423055 194423285 -8662247 - L1ME LINE L1 -347 5774 5524 1957 119 13 7 chr5 194423363 194423673 -8661859 + AluSx SINE Alu 1 312 0 528 264 82 20 chr5 194424511 194424715 -8660817 + MIR SINE MIR 32 256 -6 204 67 0 0 chr5 194424910 194424940 -8660592 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 782 173 0 8 chr5 194425080 194425213 -8660319 + FLAM_C SINE Alu 8 139 -4 740 163 23 0 chr5 194425498 194425627 -8659905 + MLT1B LTR MaLR 259 390 0 30 27 0 0 chr5 194425972 194426009 -8659523 + AT_rich Low_complexity Low_complexity 1 37 0 2237 130 42 10 chr5 194426009 194426175 -8659357 - L1MA1 LINE L1 0 6302 6143 392 175 0 0 chr5 194426175 194426255 -8659277 + MADE1 DNA Mariner 1 80 0 2237 130 42 10 chr5 194426255 194426489 -8659043 - L1MA1 LINE L1 -159 6143 5889 1283 79 0 0 chr5 194426489 194426667 -8658865 - L1MA1 LINE L1 -342 7379 7202 377 138 0 25 chr5 194426767 194426847 -8658685 + L1MA4 LINE L1 6222 6299 -1 543 151 58 29 chr5 194427954 194428093 -8657439 + Tigger6 DNA MER2_type 1308 1450 -147 249 129 65 0 chr5 194429707 194429800 -8655732 + (TA)n Simple_repeat Simple_repeat 2 100 0 2571 165 59 12 chr5 194429804 194430418 -8655114 - L1MA1 LINE L1 -509 7210 6574 1198 215 15 15 chr5 194430472 194430737 -8654795 + L1M1 LINE L1 1 265 -7300 1446 303 98 22 chr5 194431138 194431934 -8653598 + L2 LINE L2 2424 3282 -31 3367 215 29 9 chr5 194432040 194432950 -8652582 - L1MA1 LINE L1 -2520 5045 4118 775 201 71 0 chr5 194432956 194433110 -8652422 - L1MA1 LINE L1 -6891 674 510 2127 160 20 11 chr5 194433210 194433566 -8651966 + THE1C LTR MaLR 17 375 0 227 215 15 0 chr5 194434564 194434629 -8650903 + GA-rich Low_complexity Low_complexity 3 68 0 1774 81 0 0 chr5 194435738 194435972 -8649560 - AluY SINE Alu -75 236 3 3753 216 4 4 chr5 194435977 194436801 -8648731 - L1 LINE L1 -3213 2933 2110 1958 123 67 22 chr5 194437031 194437390 -8648142 - THE1C LTR MaLR 0 375 1 1765 161 55 5 chr5 194438755 194439296 -8646236 + L1P4 LINE L1 4941 5501 -664 4787 38 3 2 chr5 194439399 194439976 -8645556 - L1HS LINE L1 -1 6154 5577 1108 148 23 51 chr5 194439976 194440192 -8645340 + THE1B LTR MaLR 155 364 0 23 0 0 0 chr5 194440273 194440296 -8645236 + AT_rich Low_complexity Low_complexity 1 23 0 239 314 40 32 chr5 194440650 194440774 -8644758 - MIR SINE MIR -130 132 8 9058 130 10 28 chr5 194440997 194442661 -8642871 - L1 LINE L1 -3778 3787 2153 3350 191 16 4 chr5 194442764 194443439 -8642093 + L1 LINE L1 3913 4595 -1551 1088 189 94 0 chr5 194443434 194443622 -8641910 + L1 LINE L1 5101 5317 -829 * 411 21 0 0 chr5 194443622 194443670 -8641862 + (CAT)n Simple_repeat Simple_repeat 2 49 0 1088 189 94 0 chr5 194443670 194443714 -8641818 + L1 LINE L1 5317 5355 -791 851 110 8 0 chr5 194443714 194443832 -8641700 - L1PA14 LINE L1 -9 6152 6034 4637 231 51 9 chr5 194443932 194445214 -8640318 - L1M4 LINE L1 -1242 4904 3569 306 338 60 66 chr5 194445650 194446234 -8639298 + L2 LINE L2 2478 3055 -217 742 201 30 0 chr5 194446395 194446559 -8638973 - L1 LINE L1 -1008 5138 4970 329 267 30 0 chr5 194446662 194446763 -8638769 + L1MA8 LINE L1 6186 6289 -2 1453 203 172 3 chr5 194446877 194447239 -8638293 + LTR45B LTR ERV1 3 562 -60 378 0 0 0 chr5 194447651 194447693 -8637839 + (TA)n Simple_repeat Simple_repeat 2 43 0 1061 274 35 0 chr5 194447697 194448037 -8637495 + L1PBa LINE L1 6 357 -6506 532 248 57 0 chr5 194448556 194448697 -8636835 - Charlie1b DNA MER1_type -326 197 49 328 236 55 0 chr5 194449026 194449153 -8636379 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 0 0 0 chr5 194449238 194449259 -8636273 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 194449955 194449976 -8635556 + AT_rich Low_complexity Low_complexity 1 21 0 336 170 53 0 chr5 194451122 194451216 -8634316 + GA-rich Low_complexity Low_complexity 4 102 0 4593 208 22 19 chr5 194451682 194452321 -8633211 + L1 LINE L1 3784 4430 -1716 2052 138 58 25 chr5 194452321 194452684 -8632848 + THE1C LTR MaLR 1 375 0 4593 208 22 19 chr5 194452684 194453113 -8632419 + L1 LINE L1 4430 4856 -1290 6558 98 22 6 chr5 194453213 194454165 -8631367 + HERVH LTR ERV1 6743 7709 -4 7936 115 7 30 chr5 194454165 194455415 -8630117 - HERVH LTR ERV1 -5095 2618 1398 1692 231 54 9 chr5 194455515 194455940 -8629592 + Tigger6a DNA MER2_type 382 825 -258 510 215 86 43 chr5 194455944 194456054 -8629478 - L1MD2 LINE L1 -114 6245 6124 192 40 0 0 chr5 194456054 194456079 -8629453 + (TG)n Simple_repeat Simple_repeat 2 26 0 510 215 86 43 chr5 194456079 194456131 -8629401 - L1MD2 LINE L1 -235 6124 6076 1129 191 4 33 chr5 194456432 194456704 -8628828 + Tigger6a DNA MER2_type 819 1082 -1 2420 68 14 0 chr5 194457867 194458162 -8627370 - AluY SINE Alu -9 302 4 318 355 44 47 chr5 194459078 194459374 -8626158 - L3 LINE CR1 -4 1573 1279 2138 111 27 0 chr5 194459690 194459988 -8625544 + L1PA13 LINE L1 5858 6163 0 24 0 0 0 chr5 194460273 194460297 -8625235 + AT_rich Low_complexity Low_complexity 1 24 0 522 294 0 17 chr5 194461298 194461464 -8624068 - MIR SINE MIR -67 141 24 376 324 115 55 chr5 194461751 194462220 -8623312 + MLT1L LTR MaLR 119 615 0 2063 144 7 0 chr5 194462395 194462701 -8622831 - AluSx SINE Alu -2 310 3 216 0 0 0 chr5 194463411 194463435 -8622097 + (TC)n Simple_repeat Simple_repeat 1 24 0 2356 87 10 0 chr5 194463435 194463734 -8621798 - AluY SINE Alu -9 302 1 493 245 67 40 chr5 194464826 194465269 -8620263 + LTR33 LTR ERVL 1 494 -27 245 312 83 19 chr5 194465324 194465339 -8620193 + L2 LINE L2 2922 2935 -337 2274 115 0 6 chr5 194465339 194465653 -8619879 - AluSx SINE Alu 0 312 1 245 312 83 19 chr5 194465653 194465794 -8619738 + L2 LINE L2 2935 3088 -184 311 160 0 0 chr5 194467533 194467583 -8617949 + L2 LINE L2 3262 3311 -2 228 278 0 0 chr5 194468570 194468624 -8616908 + MIR SINE MIR 84 137 -125 233 209 49 38 chr5 194469853 194469942 -8615590 - MIR SINE MIR -63 145 103 204 246 207 0 chr5 194470501 194470559 -8614973 + MIR SINE MIR 38 106 -102 632 221 198 23 chr5 194470567 194470784 -8614748 - MIR SINE MIR -3 259 5 450 192 112 8 chr5 194471838 194471963 -8613569 - MER113 DNA MER1_type? -383 138 1 22 0 0 0 chr5 194472186 194472208 -8613324 + AT_rich Low_complexity Low_complexity 1 22 0 2475 52 3 0 chr5 194472208 194472494 -8613038 - L1PA7 LINE L1 -4 6150 5864 390 276 16 8 chr5 194472557 194472680 -8612852 + MIR SINE MIR 86 209 -53 1282 214 91 29 chr5 194473281 194473622 -8611910 + MER74A LTR ERVL 1 362 -196 1123 202 87 29 chr5 194474068 194474345 -8611187 + L1MD2 LINE L1 5849 6141 -218 4304 207 88 8 chr5 194474949 194475900 -8609632 - L1MD2 LINE L1 -4 6355 5329 436 257 149 7 chr5 194476260 194476408 -8609124 - MIR SINE MIR -74 188 20 2076 111 49 25 chr5 194476565 194476911 -8608621 - THE1C LTR MaLR -22 374 1 448 248 148 14 chr5 194477104 194477502 -8608030 - LTR33 LTR ERVL 0 521 23 1435 212 128 6 chr5 194477515 194477873 -8607659 + MLT1D LTR MaLR 4 405 -100 827 143 68 14 chr5 194477880 194478027 -8607505 - L1PA16 LINE L1 -20 6146 5992 180 152 0 0 chr5 194478027 194478060 -8607472 + CT-rich Low_complexity Low_complexity 2 34 0 663 178 8 8 chr5 194478060 194478189 -8607343 - L1PA16 LINE L1 -146 6020 5892 496 241 0 9 chr5 194478193 194478305 -8607227 + MLT1D LTR MaLR 395 505 0 1870 194 136 2 chr5 194478657 194479075 -8606457 - MLT1D LTR MaLR -31 474 1 1790 189 0 0 chr5 194479962 194480309 -8605223 + AluJb SINE Alu 1 312 0 1358 202 42 74 chr5 194480340 194480717 -8604815 - MLT1A1 LTR MaLR 0 365 1 183 80 0 0 chr5 194480723 194480748 -8604784 + (A)n Simple_repeat Simple_repeat 1 25 0 1088 269 26 16 chr5 194480927 194481239 -8604293 - MLT1K LTR MaLR -258 330 16 209 148 37 37 chr5 194482055 194482109 -8603423 + A-rich Low_complexity Low_complexity 5 58 0 290 215 65 43 chr5 194482110 194482203 -8603329 - MLT1K LTR MaLR -36 552 458 314 255 138 11 chr5 194482222 194482316 -8603216 + L2 LINE L2 3203 3308 -5 189 107 0 0 chr5 194482403 194482431 -8603101 + (TC)n Simple_repeat Simple_repeat 1 28 0 206 88 0 59 chr5 194482502 194482536 -8602996 - MIR SINE MIR -60 148 117 737 295 142 3 chr5 194483623 194483948 -8601584 + L3 LINE CR1 473 842 -735 294 73 0 0 chr5 194484582 194484623 -8600909 + (CA)n Simple_repeat Simple_repeat 2 42 0 673 218 35 57 chr5 194486922 194487151 -8598381 + MLT1C LTR MaLR 51 274 -193 241 105 0 26 chr5 194487215 194487253 -8598279 + MLT1C LTR MaLR 312 348 -42 376 220 142 14 chr5 194487880 194488021 -8597511 + MIR SINE MIR 70 228 -34 310 148 0 19 chr5 194489041 194489095 -8596437 - AluJb SINE Alu -5 297 245 1026 145 0 25 chr5 194489095 194489254 -8596278 - AluJb SINE Alu -157 155 1 1494 165 8 0 chr5 194489404 194489641 -8595891 - AluJo SINE Alu -11 301 63 3408 202 13 4 chr5 194490708 194490904 -8594628 + L1MC3 LINE L1 6902 7095 -690 2017 150 0 3 chr5 194490904 194491211 -8594321 - AluJb SINE Alu -6 306 1 3408 202 13 4 chr5 194491211 194491692 -8593840 + L1MC3 LINE L1 7095 7585 -200 1089 137 47 19 chr5 194491693 194491905 -8593627 + L1MC2 LINE L1 6127 6344 0 1120 252 102 21 chr5 194492209 194492534 -8592998 + MLT1G1 LTR MaLR 245 595 0 1376 174 53 31 chr5 194492775 194493114 -8592418 + MER33 DNA MER1_type 1 324 0 478 208 28 0 chr5 194493146 194493252 -8592280 - MER103 DNA DNA -17 149 41 305 245 20 86 chr5 194493305 194493456 -8592076 + L2 LINE L2 2988 3128 -185 1000 239 101 13 chr5 194493487 194493872 -8591660 - LTR33 LTR ERVL -1 520 102 210 260 82 14 chr5 194493903 194493976 -8591556 + L2 LINE L2 3182 3259 -54 1278 246 81 18 chr5 194494124 194494518 -8591014 - L1ME3A LINE L1 -7 6163 5745 265 269 67 0 chr5 194494535 194494639 -8590893 - L1ME3A LINE L1 -1629 4517 4407 296 182 15 0 chr5 194494665 194494731 -8590801 - L1ME LINE L1 -431 5731 5665 230 94 19 38 chr5 194494737 194494790 -8590742 + LTR66 LTR ERVL 389 440 -170 227 111 0 56 chr5 194494807 194494861 -8590671 - LTR66 LTR ERVL -171 439 389 263 174 41 133 chr5 194494867 194494965 -8590567 - L1ME LINE L1 -523 5647 5559 4764 274 73 32 chr5 194495435 194495552 -8589980 - L1ME LINE L1 -916 5230 5119 324 0 0 0 chr5 194495552 194495588 -8589944 + (TG)n Simple_repeat Simple_repeat 1 36 0 4764 274 73 32 chr5 194495588 194498405 -8587127 - L1ME LINE L1 -1027 5119 2110 2286 286 74 33 chr5 194498447 194499720 -8585812 + L2 LINE L2 1982 3312 -1 195 299 60 67 chr5 194499724 194499858 -8585674 - MIR SINE MIR -78 184 52 420 243 9 28 chr5 194500255 194500362 -8585170 - L2 LINE L2 0 3272 3168 2439 107 0 0 chr5 194500599 194500907 -8584625 + AluSx SINE Alu 1 308 -4 627 241 43 25 chr5 194500984 194501146 -8584386 + MLT1J2 LTR MaLR 16 180 -270 323 220 0 0 chr5 194501158 194501217 -8584315 + MLT1J1 LTR MaLR 263 321 -125 804 296 129 6 chr5 194501357 194501698 -8583834 + MLT1J2 LTR MaLR 67 449 -1 319 276 31 10 chr5 194501828 194501926 -8583606 + L2 LINE L2 3205 3304 -9 541 228 72 42 chr5 194502539 194502732 -8582800 - L2 LINE L2 -1 3312 3114 2546 69 0 3 chr5 194502881 194503185 -8582347 + AluY SINE Alu 2 304 -7 352 271 62 42 chr5 194503372 194503521 -8582011 - MLT1K LTR MaLR -17 571 416 1237 33 11 28 chr5 194503521 194503703 -8581829 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 352 271 62 42 chr5 194503703 194503745 -8581787 - MLT1K LTR MaLR -172 416 376 950 100 36 0 chr5 194503750 194503890 -8581642 - MSTB1 LTR MaLR -5 427 283 712 194 51 0 chr5 194503914 194504089 -8581443 + Charlie5 DNA MER1_type 2402 2585 -27 1434 199 97 26 chr5 194504222 194504603 -8580929 - L1ME1 LINE L1 -20 6215 5808 232 125 6 0 chr5 194504603 194504653 -8580879 - MLT2B1 LTR ERVL -6 514 358 1547 222 31 41 chr5 194504691 194505178 -8580354 - L1ME1 LINE L1 -959 5256 4775 839 249 12 91 chr5 194506637 194506979 -8578553 - L1ME1 LINE L1 -4 6162 5848 533 194 35 47 chr5 194506975 194507145 -8578387 + L1M4 LINE L1 3631 3798 -2348 * 4013 238 73 28 chr5 194507177 194507622 -8577910 - L1ME1 LINE L1 -5002 1394 970 2409 76 3 0 chr5 194507622 194507913 -8577619 - AluY SINE Alu -17 294 3 4013 238 73 28 chr5 194507913 194508653 -8576879 - L1ME1 LINE L1 -5426 970 143 1803 197 25 30 chr5 194508653 194509018 -8576514 + MLT1A1 LTR MaLR 3 365 0 4013 238 73 28 chr5 194509018 194509133 -8576399 - L1ME1 LINE L1 -6253 143 35 744 254 98 30 chr5 194510711 194510975 -8574557 + L2 LINE L2 3032 3313 0 243 0 0 0 chr5 194511261 194511288 -8574244 + (CA)n Simple_repeat Simple_repeat 2 28 0 1358 262 201 17 chr5 194511475 194511599 -8573933 + L2 LINE L2 1657 1757 -1557 1866 146 66 33 chr5 194511599 194511962 -8573570 + THE1C LTR MaLR 1 375 0 1358 262 201 17 chr5 194511962 194512641 -8572891 + L2 LINE L2 1757 2608 -706 2280 223 28 32 chr5 194512643 194513177 -8572355 + MLT1F LTR MaLR 1 532 -10 228 274 16 0 chr5 194513203 194513265 -8572267 + L2 LINE L2 2657 2719 -595 599 264 85 30 chr5 194513265 194513682 -8571850 + L1M4c LINE L1 1075 1524 -4860 1590 239 65 12 chr5 194513692 194514202 -8571330 + L1M4c LINE L1 1794 2330 -4233 1006 228 52 9 chr5 194515266 194515498 -8570034 + MLT1A1 LTR MaLR 1 242 -123 2114 123 25 87 chr5 194515511 194515700 -8569832 - L1MA4 LINE L1 -21 6279 6080 2304 106 10 0 chr5 194515700 194516001 -8569531 - AluSx SINE Alu -8 304 1 2114 123 25 87 chr5 194516001 194516259 -8569273 - L1MA4 LINE L1 -220 6080 5860 545 283 128 59 chr5 194516358 194516797 -8568735 + MLT1L LTR MaLR 142 610 -5 834 190 12 0 chr5 194517126 194517289 -8568243 - MER5A DNA MER1_type -24 165 1 399 321 168 22 chr5 194517423 194517834 -8567698 - L2 LINE L2 -15 3298 2828 249 188 32 41 chr5 194518930 194519010 -8566522 + MIR SINE MIR 36 115 -93 414 235 211 0 chr5 194519097 194519263 -8566269 - MIR SINE MIR -13 249 49 222 308 150 8 chr5 194519652 194519785 -8565747 + MIR SINE MIR 90 241 -21 323 270 186 37 chr5 194520503 194520799 -8564733 + MLT1J LTR MaLR 102 441 -70 229 183 17 33 chr5 194520948 194521008 -8564524 + MLT1L LTR MaLR 552 610 -5 394 264 115 7 chr5 194521854 194522002 -8563530 + MER103 DNA DNA 3 166 0 338 264 68 19 chr5 194522242 194522415 -8563117 + MIR SINE MIR 36 214 -48 184 274 203 24 chr5 194522812 194523024 -8562508 + L2 LINE L2 2809 3058 -255 2195 130 14 8 chr5 194523853 194524206 -8561326 - L1MB5 LINE L1 -1 6173 5819 2311 107 3 0 chr5 194524206 194524506 -8561026 - AluSx SINE Alu -11 301 1 315 256 112 11 chr5 194525354 194525528 -8560004 + MIR SINE MIR 47 242 -20 4195 45 0 2 chr5 194525742 194526251 -8559281 + L1PA8 LINE L1 5660 6167 -5 481 295 44 26 chr5 194526506 194526733 -8558799 - MIR SINE MIR -1 261 31 4480 124 29 27 chr5 194526756 194527179 -8558353 + L1MA9 LINE L1 5227 5652 -660 2171 155 114 5 chr5 194527179 194527565 -8557967 + MSTA LTR MaLR 1 428 0 4480 124 29 27 chr5 194527565 194527937 -8557595 + L1MA9 LINE L1 5652 6021 -291 985 72 24 18 chr5 194528314 194528480 -8557052 + (GAAA)n Simple_repeat Simple_repeat 1 167 0 931 147 21 31 chr5 194528582 194528773 -8556759 + L1MA7 LINE L1 5833 6021 -270 1105 66 31 13 chr5 194529152 194529378 -8556154 + (GAAA)n Simple_repeat Simple_repeat 1 231 0 406 230 35 9 chr5 194529408 194529521 -8556011 + MIR SINE MIR 61 176 -86 333 242 0 0 chr5 194529748 194529839 -8555693 + (TG)n Simple_repeat Simple_repeat 2 92 0 393 252 136 19 chr5 194530929 194531084 -8554448 - MIR SINE MIR -58 204 32 559 243 28 69 chr5 194531648 194531895 -8553637 + LTR33 LTR ERVL 31 267 -254 309 320 20 20 chr5 194532336 194532486 -8553046 - L1MC/D LINE L1 -2039 5769 5620 24 24 0 24 chr5 194532721 194532735 -8552797 + AT_rich Low_complexity Low_complexity 1 14 -27 2254 95 0 0 chr5 194532735 194533020 -8552512 + AluSx SINE Alu 1 285 -27 24 24 0 24 chr5 194533020 194533047 -8552485 + AT_rich Low_complexity Low_complexity 14 41 0 278 337 65 5 chr5 194533401 194533556 -8551976 - MER5A DNA MER1_type -1 188 9 436 262 103 78 chr5 194533696 194533999 -8551533 + Charlie8 DNA MER1_type 77 442 -1975 2882 7 0 0 chr5 194533999 194534302 -8551230 - AluYa5 SINE Alu -8 303 1 436 262 103 78 chr5 194534302 194534378 -8551154 + Charlie8 DNA MER1_type 442 515 -1902 1070 188 18 40 chr5 194534525 194534749 -8550783 + MER20 DNA MER1_type 1 219 0 1037 250 84 21 chr5 194535048 194535428 -8550104 + MLT1I LTR MaLR 3 406 -3 1398 253 91 5 chr5 194535438 194535880 -8549652 - MER113 DNA MER1_type? -27 494 15 213 271 0 0 chr5 194536080 194536128 -8549404 + L2 LINE L2 3262 3309 -4 183 80 0 0 chr5 194536691 194536716 -8548816 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 639 270 141 23 chr5 194536781 194537044 -8548488 + MLT1G LTR MaLR 2 295 -300 902 232 71 0 chr5 194537093 194537304 -8548228 + MLT1G LTR MaLR 365 590 0 24 0 0 0 chr5 194537435 194537459 -8548073 + AT_rich Low_complexity Low_complexity 1 24 0 585 226 0 8 chr5 194537466 194537590 -8547942 - FLAM_C SINE Alu -16 127 5 282 278 68 23 chr5 194539390 194539523 -8546009 - L3 LINE CR1 -9 1568 1430 247 358 54 34 chr5 194539707 194539855 -8545677 - MIR SINE MIR -66 196 46 592 233 153 22 chr5 194540028 194540256 -8545276 + L3b LINE CR1 1154 1411 -172 432 294 65 18 chr5 194540561 194540731 -8544801 + MIR SINE MIR 69 246 -16 2297 104 0 0 chr5 194540795 194541092 -8544440 - AluSq SINE Alu -16 297 1 316 296 19 10 chr5 194541432 194541542 -8543990 + MIR SINE MIR 44 153 -65 608 141 141 0 chr5 194542098 194542219 -8543313 - MER20 DNA MER1_type -18 201 64 216 213 0 0 chr5 194542447 194542508 -8543024 + GA-rich Low_complexity Low_complexity 2 62 0 433 280 59 8 chr5 194544162 194544280 -8541252 - MER91C DNA MER1_type -14 126 3 229 233 27 14 chr5 194544342 194544415 -8541117 + MLT1K LTR MaLR 513 586 -2 569 231 16 108 chr5 194545206 194545286 -8540246 - MLT1F1 LTR MaLR -398 169 114 2422 83 3 0 chr5 194545286 194545586 -8539946 + AluSx SINE Alu 1 301 -11 569 231 16 108 chr5 194545586 194545691 -8539841 - MLT1F1 LTR MaLR -453 114 1 1130 148 8 93 chr5 194545784 194546020 -8539512 - MER20 DNA MER1_type 0 219 4 4284 248 89 81 chr5 194546164 194546454 -8539078 - HAL1 LINE L1 -42 2465 2179 2651 62 0 0 chr5 194546454 194546763 -8538769 - AluY SINE Alu -2 309 1 4284 248 89 81 chr5 194546763 194547087 -8538445 - HAL1 LINE L1 -328 2179 1859 1185 209 74 115 chr5 194547087 194547574 -8537958 + MLT1C LTR MaLR 1 467 0 4284 248 89 81 chr5 194547574 194548202 -8537330 - HAL1 LINE L1 -648 1859 1238 1932 126 43 20 chr5 194548202 194548504 -8537028 - AluSg1 SINE Alu 0 309 1 4284 248 89 81 chr5 194548504 194549692 -8535840 - HAL1 LINE L1 -1269 1238 13 1502 243 163 27 chr5 194550095 194550831 -8534701 - L2 LINE L2 -30 3242 2284 647 309 73 13 chr5 194550798 194551031 -8534501 - MIR SINE MIR -3 259 13 * 661 274 70 11 chr5 194551157 194551343 -8534189 + MIR SINE MIR 17 213 -49 377 287 173 0 chr5 194552613 194552763 -8532769 - MIR SINE MIR -6 256 81 325 321 9 9 chr5 194552854 194552960 -8532572 - MIR3 SINE MIR -10 198 93 2439 109 0 0 chr5 194553689 194554002 -8531530 - AluSq SINE Alu 0 313 1 739 256 14 14 chr5 194554025 194554232 -8531300 + MIR SINE MIR 37 243 -19 256 267 0 17 chr5 194554344 194554404 -8531128 - MIR SINE MIR -112 96 38 555 261 62 25 chr5 194554673 194554914 -8530618 - MER20B DNA MER1_type -29 754 505 1289 217 27 3 chr5 194555036 194555335 -8530197 - MER20B DNA MER1_type -302 481 176 1239 278 45 2 chr5 194555402 194556001 -8529531 + L1ME3A LINE L1 5078 5755 -415 482 217 17 0 chr5 194556002 194556122 -8529410 + L1ME3A LINE L1 5831 5952 -218 525 264 14 69 chr5 194556163 194556379 -8529153 - MLT1J LTR MaLR -77 434 231 252 360 43 7 chr5 194557182 194557321 -8528211 + MIR SINE MIR 45 188 -74 772 209 31 15 chr5 194557418 194557614 -8527918 - L1MB8 LINE L1 0 6178 5980 816 284 92 9 chr5 194557705 194558043 -8527489 - MER115 DNA AcHobo -19 674 309 194 299 65 0 chr5 194558788 194558865 -8526667 - MIR SINE MIR -4 258 177 2135 178 58 5 chr5 194558923 194559333 -8526199 + MSTB1 LTR MaLR 1 432 0 762 234 18 6 chr5 194559336 194559507 -8526025 + MER5A DNA MER1_type 14 186 -3 382 162 27 0 chr5 194559551 194559634 -8525898 - Tigger4(Zombi) DNA MER2_type 0 2731 1 296 189 0 0 chr5 194559587 194559640 -8525892 + MER46A DNA MER2_type 98 150 -86 * 621 266 64 6 chr5 194559645 194559818 -8525714 - MIR SINE MIR 0 262 80 21 0 0 0 chr5 194559883 194559904 -8525628 + AT_rich Low_complexity Low_complexity 1 21 0 789 232 54 89 chr5 194560026 194560375 -8525157 - MER102b DNA MER1_type -4 337 1 218 279 0 0 chr5 194560860 194560928 -8524604 + (TAA)n Simple_repeat Simple_repeat 1 68 0 1354 165 190 124 chr5 194560976 194561460 -8524072 - MLT2B1 LTR ERVL -3 517 2 2125 83 7 4 chr5 194561497 194561775 -8523757 + AluSg SINE Alu 1 279 -31 228 111 0 0 chr5 194561779 194561815 -8523717 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 1273 187 55 35 chr5 194561912 194562259 -8523273 - L1MC4 LINE L1 -1 8041 7688 1846 210 58 23 chr5 194563732 194564213 -8521319 - MLT1D LTR MaLR -3 502 5 824 255 86 64 chr5 194564448 194564856 -8520676 - LTR33 LTR ERVL 0 521 105 352 239 122 39 chr5 194565230 194565410 -8520122 - LTR67 LTR ERVL -4 553 359 367 261 117 39 chr5 194565454 194565684 -8519848 - LTR67 LTR ERVL -307 250 3 229 252 174 0 chr5 194566307 194566422 -8519110 - MLT1F-int LTR MaLR -913 458 324 430 298 77 0 chr5 194566428 194566609 -8518923 - MLT1F-int LTR MaLR -1172 199 5 2751 178 30 28 chr5 194566613 194567153 -8518379 - MLT1F LTR MaLR 0 542 2 204 200 0 0 chr5 194567176 194567221 -8518311 + (TATATG)n Simple_repeat Simple_repeat 5 49 0 294 243 21 21 chr5 194567240 194567380 -8518152 - L1ME4a LINE L1 -11 6110 5971 464 308 73 24 chr5 194567481 194567809 -8517723 - L1ME4a LINE L1 -297 5824 5481 378 262 79 20 chr5 194567841 194568084 -8517448 + L1MC/D LINE L1 5218 5468 -716 219 167 191 12 chr5 194568127 194568211 -8517321 + L2 LINE L2 2871 2969 -303 336 306 0 15 chr5 194568364 194568498 -8517034 + L1MC/D LINE L1 5684 5815 -1993 997 209 0 25 chr5 194568502 194568703 -8516829 + MIR SINE MIR 3 198 -64 348 103 0 0 chr5 194568826 194568884 -8516648 + (CA)n Simple_repeat Simple_repeat 2 59 0 725 207 10 66 chr5 194569459 194569657 -8515875 + MER53 DNA DNA 1 187 -2 599 176 35 63 chr5 194569845 194569987 -8515545 - MER5B DNA MER1_type -39 139 2 270 193 0 0 chr5 194570004 194570061 -8515471 + (TG)n Simple_repeat Simple_repeat 1 57 0 302 297 37 46 chr5 194571492 194571713 -8513819 + L1M4 LINE L1 5426 5645 -529 1445 246 72 32 chr5 194572003 194572475 -8513057 + MLT1H1 LTR MaLR 1 491 -64 2497 106 31 19 chr5 194572492 194572852 -8512680 - THE1B LTR MaLR 0 364 1 12480 80 3 6 chr5 194572852 194574437 -8511095 - THE1B-int LTR MaLR 0 1580 1 1536 128 19 34 chr5 194574441 194574706 -8510826 - THE1B LTR MaLR -4 360 100 26 0 0 0 chr5 194574754 194574780 -8510752 + AT_rich Low_complexity Low_complexity 1 26 0 3369 206 33 16 chr5 194575132 194575526 -8510006 + L1M4 LINE L1 4147 4533 -1613 1805 153 71 102 chr5 194575526 194576004 -8509528 + MLT1C LTR MaLR 5 467 0 3369 206 33 16 chr5 194576004 194576431 -8509101 + L1M4 LINE L1 4533 4982 -1164 2227 121 0 10 chr5 194576501 194576807 -8508725 + AluSg SINE Alu 1 303 -7 3311 158 67 14 chr5 194576845 194577533 -8507999 - L1MC3 LINE L1 -3 7782 7059 194 255 0 21 chr5 194578899 194578946 -8506586 + MIR SINE MIR 29 74 -188 1514 190 62 46 chr5 194579958 194580326 -8505206 + MLT1A2 LTR MaLR 1 374 0 400 289 121 6 chr5 194580406 194580579 -8504953 - MER115 DNA AcHobo -485 208 16 741 250 23 6 chr5 194580583 194580759 -8504773 + MIR SINE MIR 57 235 -27 28 29 0 0 chr5 194581189 194581224 -8504308 + AT_rich Low_complexity Low_complexity 1 35 0 979 218 19 78 chr5 194582016 194582287 -8503245 - MIR SINE MIR -5 257 3 326 311 95 37 chr5 194582472 194582662 -8502870 + MIR SINE MIR 45 245 -17 330 284 86 0 chr5 194582846 194582962 -8502570 + MIR SINE MIR 13 138 -124 219 304 96 44 chr5 194583636 194583771 -8501761 - MIR3 SINE MIR -64 144 3 394 211 89 49 chr5 194583804 194583927 -8501605 - MIR3 SINE MIR -39 169 42 493 281 62 39 chr5 194584192 194584370 -8501162 - MIR SINE MIR -54 208 27 331 305 21 43 chr5 194584650 194584807 -8500725 + MIR SINE MIR 41 195 -63 682 115 0 39 chr5 194584986 194585029 -8500503 + (TCCC)n Simple_repeat Simple_repeat 1 44 -131 180 0 0 0 chr5 194585029 194585049 -8500483 + (CATCC)n Simple_repeat Simple_repeat 1 20 0 682 115 0 39 chr5 194585049 194585187 -8500345 + (TCCC)n Simple_repeat Simple_repeat 44 175 0 3415 207 124 52 chr5 194587084 194587425 -8498107 + L1MC4 LINE L1 6746 7061 -981 2128 126 0 10 chr5 194587425 194587718 -8497814 + AluSx SINE Alu 1 290 -22 3415 207 124 52 chr5 194587718 194588452 -8497080 + L1MC4 LINE L1 7061 7899 -143 233 143 0 0 chr5 194588468 194588510 -8497022 + L1MC4 LINE L1 8001 8042 0 2357 138 20 5 chr5 194588584 194588976 -8496556 + L1MB3 LINE L1 5771 6168 -15 2160 147 65 30 chr5 194589543 194589919 -8495613 - MER65A LTR ERV1 0 445 51 2236 105 13 3 chr5 194589919 194590223 -8495309 - AluSx SINE Alu -5 307 1 2160 147 65 30 chr5 194590223 194590276 -8495256 - MER65A LTR ERV1 -394 51 1 222 348 0 11 chr5 194590480 194590569 -8494963 + L2 LINE L2 3188 3275 -38 466 193 62 55 chr5 194590747 194590892 -8494640 + L1MD1 LINE L1 6096 6241 -1 207 0 0 0 chr5 194591425 194591448 -8494084 + (T)n Simple_repeat Simple_repeat 1 23 0 604 138 261 0 chr5 194592395 194592533 -8492999 - MER5A DNA MER1_type -15 174 1 448 259 146 13 chr5 194594293 194594451 -8491081 + MER5A DNA MER1_type 11 189 0 1436 229 55 26 chr5 194597876 194598238 -8487294 + MLT1A1 LTR MaLR 1 364 -1 188 219 178 55 chr5 194599083 194599156 -8486376 + MIR SINE MIR 166 247 -15 1012 255 92 21 chr5 194599333 194599714 -8485818 - L1MD2 LINE L1 -3 6356 5949 233 262 143 0 chr5 194601330 194601414 -8484118 + MLT1K LTR MaLR 485 580 -8 611 116 53 0 chr5 194601685 194601780 -8483752 - MER5A DNA MER1_type -89 100 1 555 135 22 11 chr5 194601928 194602017 -8483515 - Tigger7 DNA MER2_type -2 2489 2400 437 169 48 12 chr5 194602026 194602109 -8483423 - Tigger7 DNA MER2_type -2156 331 246 269 143 20 0 chr5 194602093 194602142 -8483390 - Tigger7 DNA MER2_type -683 50 1 * 183 325 231 0 chr5 194602363 194602480 -8483052 + L2 LINE L2 3124 3267 -5 276 172 0 0 chr5 194603692 194603750 -8481782 + (CGG)n Simple_repeat Simple_repeat 2 59 0 210 367 18 28 chr5 194604099 194604208 -8481324 + MER5A DNA MER1_type 44 151 -38 239 207 58 23 chr5 194604299 194604386 -8481146 - L1ME4a LINE L1 -6 6115 6026 412 305 122 25 chr5 194604434 194604631 -8480901 - MIR SINE MIR 0 262 47 2305 95 0 3 chr5 194604984 194605289 -8480243 - AluSx SINE Alu -8 304 1 226 192 0 58 chr5 194605764 194605816 -8479716 + L2 LINE L2 3189 3237 -35 508 259 53 0 chr5 194606798 194606929 -8478603 + L2 LINE L2 3175 3312 -1 2501 55 0 0 chr5 194607539 194607848 -8477684 + AluY SINE Alu 1 309 -2 630 251 114 0 chr5 194608058 194608233 -8477299 + MIR SINE MIR 52 246 -16 245 331 53 13 chr5 194608531 194608682 -8476850 + MLT1J LTR MaLR 11 167 -344 1387 231 34 12 chr5 194608795 194609116 -8476416 + MLT1I LTR MaLR 82 409 0 2098 78 51 7 chr5 194609246 194609542 -8475990 - AluSg1 SINE Alu 0 309 1 293 361 22 33 chr5 194609604 194609784 -8475748 + MER5B DNA MER1_type 1 178 0 252 0 0 0 chr5 194610165 194610193 -8475339 + (TA)n Simple_repeat Simple_repeat 2 29 0 2250 100 0 3 chr5 194610193 194610492 -8475040 - AluSc SINE Alu -11 298 1 370 347 155 5 chr5 194610991 194611210 -8474322 - MIR SINE MIR -6 256 5 * 456 279 142 16 chr5 194611206 194611389 -8474143 + MIR SINE MIR 5 210 -52 596 303 45 0 chr5 194611643 194611841 -8473691 + LTR67 LTR ERVL 341 547 -10 1067 282 76 16 chr5 194613155 194613524 -8472008 + MLT1I LTR MaLR 18 408 -1 269 195 6 164 chr5 194613524 194613683 -8471849 + LTR67 LTR ERVL 2 135 -422 723 206 19 103 chr5 194613747 194613961 -8471571 + LTR67 LTR ERVL 353 548 -9 242 290 14 0 chr5 194614137 194614206 -8471326 + MIR SINE MIR 114 183 -79 262 351 99 20 chr5 194614504 194614655 -8470877 - MIR3 SINE MIR -6 202 40 269 297 236 16 chr5 194615908 194616090 -8469442 + MIR SINE MIR 24 245 -17 685 265 206 29 chr5 194616191 194616569 -8468963 - L2 LINE L2 0 3313 2869 294 300 13 124 chr5 194617294 194617527 -8468005 - L2 LINE L2 0 3313 3107 198 318 32 0 chr5 194617831 194617894 -8467638 - L2 LINE L2 -17 3255 3191 2344 83 0 0 chr5 194618665 194618966 -8466566 - AluSg SINE Alu -9 301 1 291 240 80 0 chr5 194619402 194619477 -8466055 + MIR SINE MIR 122 202 -60 342 361 41 27 chr5 194619592 194619811 -8465721 + MIR SINE MIR 20 241 -21 1566 173 23 20 chr5 194620609 194620910 -8464622 + AluJb SINE Alu 1 302 -10 572 265 48 0 chr5 194621106 194621253 -8464279 - MIR SINE MIR 0 262 109 265 339 173 12 chr5 194621703 194621876 -8463656 + MIR SINE MIR 14 209 -53 2063 131 0 0 chr5 194621936 194622233 -8463299 + AluSx SINE Alu 1 297 -15 322 328 143 49 chr5 194622317 194622546 -8462986 + L2 LINE L2 2970 3176 -96 5755 179 56 60 chr5 194622546 194622627 -8462905 + Charlie1a DNA MER1_type 5 85 -2676 1913 62 19 65 chr5 194622627 194622952 -8462580 + AluY SINE Alu 1 310 -1 5755 179 56 60 chr5 194622952 194623198 -8462334 + Charlie1a DNA MER1_type 85 331 -2430 1752 95 4 44 chr5 194623198 194623472 -8462060 - AluSx SINE Alu -12 300 38 5755 179 56 60 chr5 194623472 194623691 -8461841 + Charlie1a DNA MER1_type 331 549 -2212 327 25 0 0 chr5 194623691 194623731 -8461801 + (CA)n Simple_repeat Simple_repeat 1 40 0 5755 179 56 60 chr5 194623731 194624639 -8460893 + Charlie1a DNA MER1_type 549 1455 0 322 328 143 49 chr5 194624639 194624674 -8460858 + L2 LINE L2 3176 3259 -13 747 295 70 16 chr5 194625605 194625975 -8459557 - LTR16A LTR ERVL -6 444 55 200 200 0 0 chr5 194626183 194626223 -8459309 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 268 269 200 48 chr5 194626261 194626406 -8459126 + MIR SINE MIR 86 252 -10 1270 260 34 17 chr5 194626681 194627088 -8458444 - MER113 DNA MER1_type? -100 421 8 197 279 10 48 chr5 194627186 194627290 -8458242 + L2 LINE L2 2961 3060 -212 485 226 8 40 chr5 194627989 194628113 -8457419 + MIR SINE MIR 28 147 -115 389 272 128 10 chr5 194628319 194628454 -8457078 - MER5A DNA MER1_type -2 187 28 191 284 165 31 chr5 194628340 194628467 -8457065 + MER5A DNA MER1_type 35 178 -11 * 481 285 53 16 chr5 194628522 194628731 -8456801 + Charlie8 DNA MER1_type 98 1417 -1000 194 321 36 0 chr5 194628735 194628791 -8456741 - MIR3 SINE MIR -53 155 98 297 250 108 88 chr5 194628973 194629144 -8456388 + MLT1K LTR MaLR 332 511 -77 768 165 52 77 chr5 194629144 194629260 -8456272 - MER53 DNA DNA 0 189 78 1756 151 3 39 chr5 194629260 194629572 -8455960 - AluSx SINE Alu -11 301 1 768 165 52 77 chr5 194629572 194629649 -8455883 - MER53 DNA DNA -111 78 1 297 250 108 88 chr5 194629649 194629717 -8455815 + MLT1K LTR MaLR 511 576 -12 328 294 18 9 chr5 194629740 194629849 -8455683 - MIR SINE MIR -82 126 17 232 236 18 0 chr5 194630017 194630072 -8455460 - L2 LINE L2 0 3313 3258 195 340 0 0 chr5 194630110 194630157 -8455375 - MIR3 SINE MIR -53 155 109 291 290 20 20 chr5 194630793 194630893 -8454639 + L2 LINE L2 2943 3042 -230 * 487 280 108 45 chr5 194630881 194631149 -8454383 - L2 LINE L2 -5 3308 3024 192 349 151 8 chr5 194631233 194631359 -8454173 + L2 LINE L2 3108 3251 -21 409 311 73 14 chr5 194631364 194631577 -8453955 - MIR SINE MIR -11 251 21 717 116 8 16 chr5 194631592 194631721 -8453811 - L1MB8 LINE L1 -7 6171 6044 876 250 22 115 chr5 194632674 194633178 -8452354 - LTR67 LTR ERVL -4 553 97 243 290 103 0 chr5 194633471 194633578 -8451954 - MLT1K LTR MaLR -469 119 2 2070 101 3 3 chr5 194633650 194633938 -8451594 - AluSg SINE Alu -22 288 1 454 344 70 9 chr5 194634138 194634368 -8451164 + MIR SINE MIR 16 259 -3 261 279 154 44 chr5 194634433 194634569 -8450963 + MIR SINE MIR 93 243 -19 1289 294 9 0 chr5 194634809 194635142 -8450390 + MLT1I LTR MaLR 60 395 -14 260 254 49 49 chr5 194635372 194635514 -8450018 + MLT1L LTR MaLR 18 159 -456 527 137 60 43 chr5 194635514 194635631 -8449901 + MER5C DNA MER1_type 5 123 -201 523 223 39 0 chr5 194635773 194635903 -8449629 + MLT1L LTR MaLR 146 280 -335 24 32 0 0 chr5 194635906 194635937 -8449595 + AT_rich Low_complexity Low_complexity 1 31 0 1848 67 13 0 chr5 194635937 194636176 -8449356 - L1PB1 LINE L1 -35 6116 5875 317 26 0 0 chr5 194636233 194636271 -8449261 - L1PB1 LINE L1 -254 5897 5860 869 132 0 0 chr5 194636271 194636407 -8449125 + AluSg/x SINE Alu 170 305 -5 3757 101 23 14 chr5 194636419 194636992 -8448540 - L1PB1 LINE L1 -320 5831 5254 10220 143 43 20 chr5 194637007 194638861 -8446671 - L1PBa LINE L1 -2199 4663 2854 225 0 0 0 chr5 194638861 194638886 -8446646 + (TG)n Simple_repeat Simple_repeat 2 26 0 10220 143 43 20 chr5 194638886 194640823 -8444709 - L1PBa LINE L1 -4008 2854 634 1110 154 15 30 chr5 194640823 194641024 -8444508 - L1PBa LINE L1 -6663 200 3 246 167 15 91 chr5 194641125 194641191 -8444341 + MLT1L LTR MaLR 499 559 -56 245 224 0 0 chr5 194641333 194641382 -8444150 - L2 LINE L2 -5 3267 3219 884 251 169 39 chr5 194642340 194642826 -8442706 - MLT1H LTR MaLR 0 549 1 406 253 27 136 chr5 194643185 194643404 -8442128 - L1MC/D LINE L1 -535 5635 5653 2211 121 0 7 chr5 194643404 194643710 -8441822 + AluSx SINE Alu 1 304 -8 406 253 27 136 chr5 194643710 194643864 -8441668 - L1MC/D LINE L1 -516 5654 5485 307 310 25 110 chr5 194643907 194644188 -8441344 + L2 LINE L2 2923 3179 -93 272 377 0 0 chr5 194644949 194645026 -8440506 + L2 LINE L2 3101 3177 -95 840 262 31 91 chr5 194645027 194645413 -8440119 - MLT1K LTR MaLR -7 581 219 258 388 124 8 chr5 194645444 194645573 -8439959 + L2 LINE L2 3104 3247 -25 986 249 86 39 chr5 194645814 194646175 -8439357 + MLT1G1 LTR MaLR 16 393 -202 23 0 0 0 chr5 194646272 194646295 -8439237 + AT_rich Low_complexity Low_complexity 1 23 0 287 326 14 0 chr5 194646585 194646723 -8438809 - Charlie8 DNA MER1_type -2144 273 134 222 224 20 20 chr5 194647574 194647623 -8437909 - MIR SINE MIR -82 126 78 2542 56 10 0 chr5 194647807 194648109 -8437423 - AluY SINE Alu -6 305 1 373 319 22 0 chr5 194648356 194648494 -8437038 + MER5B DNA MER1_type 1 141 -37 263 251 139 84 chr5 194648552 194648595 -8436937 + L1MC4a LINE L1 5682 5721 -2087 2150 127 35 49 chr5 194648595 194648964 -8436568 - THE1B LTR MaLR 0 364 1 263 251 139 84 chr5 194648964 194649135 -8436397 + L1MC4a LINE L1 5721 5908 -1900 191 239 22 0 chr5 194649322 194649368 -8436164 + MER5B DNA MER1_type 131 177 -1 247 236 36 0 chr5 194649866 194649921 -8435611 - MIR SINE MIR -111 151 95 244 285 50 27 chr5 194650193 194650366 -8435166 + MIR SINE MIR 77 252 -10 424 171 12 37 chr5 194650425 194650507 -8435025 + L2 LINE L2 3234 3313 0 226 324 0 0 chr5 194650531 194650599 -8434933 + MIR SINE MIR 68 135 -73 328 151 132 0 chr5 194651733 194651839 -8433693 - MLT2E LTR ERVL -1 627 508 424 339 65 9 chr5 194651941 194652171 -8433361 - MLT2E LTR ERVL -383 245 3 257 79 0 0 chr5 194652223 194652261 -8433271 - L1P LINE L1 -859 5295 5258 * 3029 204 54 0 chr5 194652260 194652723 -8432809 + L1 LINE L1 3929 4442 -1704 450 0 0 0 chr5 194652723 194652773 -8432759 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3029 204 54 0 chr5 194652773 194652994 -8432538 + L1 LINE L1 4442 4650 -1496 1816 146 68 4 chr5 194652994 194653275 -8432257 - AluJb SINE Alu -13 299 1 398 169 26 0 chr5 194653278 194653355 -8432177 - Charlie8 DNA MER1_type -2261 156 78 201 289 148 40 chr5 194654204 194654502 -8431030 - L2 LINE L2 -616 2698 2369 247 327 7 0 chr5 194654841 194654991 -8430541 + (TG)n Simple_repeat Simple_repeat 1 151 0 649 317 54 0 chr5 194655082 194655303 -8430229 + MIR SINE MIR 12 244 -18 335 237 81 81 chr5 194655423 194655472 -8430060 + L2 LINE L2 3127 3175 -138 1648 201 103 33 chr5 194655472 194655899 -8429633 - MSTB2 LTR MaLR 0 457 1 335 237 81 81 chr5 194655899 194656035 -8429497 + L2 LINE L2 3174 3312 -1 229 204 23 0 chr5 194656056 194656100 -8429432 + CT-rich Low_complexity Low_complexity 4 48 0 23 0 0 0 chr5 194657315 194657338 -8428194 + AT_rich Low_complexity Low_complexity 1 23 0 937 259 102 28 chr5 194658030 194658504 -8427028 - L2 LINE L2 -186 3127 2612 254 248 228 0 chr5 194660616 194660717 -8424815 - L2 LINE L2 0 3272 3149 230 254 0 0 chr5 194660717 194660772 -8424760 - Charlie8 DNA MER1_type -2 2415 2361 282 56 0 0 chr5 194660927 194660963 -8424569 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 222 0 0 chr5 194660983 194661028 -8424504 - Charlie8 DNA MER1_type -2336 81 37 285 201 231 77 chr5 194661261 194661430 -8424102 + MLT1J LTR MaLR 72 266 -245 393 211 149 0 chr5 194661463 194661577 -8423955 + MIR SINE MIR 102 232 -30 247 237 103 32 chr5 194662370 194662526 -8423006 + LTR16B LTR ERVL 278 444 -20 609 308 116 17 chr5 194662957 194663379 -8422153 - MLT1L LTR MaLR -151 464 1 181 97 97 0 chr5 194663681 194663712 -8421820 + L3 LINE CR1 1523 1556 -21 273 292 50 25 chr5 194663735 194663855 -8421677 + MIR3 SINE MIR 38 160 -48 238 329 0 0 chr5 194663925 194663998 -8421534 + MER117 DNA MER1_type 101 173 -24 221 238 12 0 chr5 194664293 194664373 -8421159 + (TA)n Simple_repeat Simple_repeat 2 82 0 844 241 69 139 chr5 194664416 194664940 -8420592 - L2 LINE L2 0 3313 2827 1486 190 31 92 chr5 194664945 194665198 -8420334 - MLT1B LTR MaLR 0 390 170 881 152 0 0 chr5 194665198 194665330 -8420202 - FLAM_C SINE Alu -1 132 1 1486 190 31 92 chr5 194665330 194665491 -8420041 - MLT1B LTR MaLR -220 170 1 748 271 99 57 chr5 194665491 194665997 -8419535 - L2 LINE L2 -497 2817 2291 295 276 0 0 chr5 194666144 194666220 -8419312 - HsTC2 DNA Tc2 -1821 77 2 2657 106 17 128 chr5 194666228 194666768 -8418764 - LTR12 LTR ERV1 -234 480 1 300 224 137 12 chr5 194666769 194666868 -8418664 - MIR SINE MIR -64 144 37 189 111 28 28 chr5 194666886 194666922 -8418610 + MIR SINE MIR 195 230 -32 4297 140 41 47 chr5 194667673 194667880 -8417652 + L1MB3 LINE L1 5284 5491 -692 2201 75 0 96 chr5 194667880 194668233 -8417299 + AluY SINE Alu 1 311 0 4297 140 41 47 chr5 194668233 194668920 -8416612 + L1MB3 LINE L1 5491 6173 -10 200 284 136 0 chr5 194668931 194669012 -8416520 + L2 LINE L2 3217 3308 -5 217 116 47 0 chr5 194669101 194669144 -8416388 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 1376 123 0 0 chr5 194669378 194669557 -8415975 - AluSx SINE Alu -131 181 3 2341 108 10 0 chr5 194670332 194670639 -8414893 - AluSx SINE Alu -2 310 1 244 250 0 0 chr5 194671012 194671064 -8414468 + LTR30 LTR ERV1 1 52 -670 2070 157 32 70 chr5 194671064 194671587 -8413945 + LTR12 LTR ERV1 55 2219 -219 2586 53 7 0 chr5 194671775 194672076 -8413456 + AluY SINE Alu 1 303 -8 1799 159 17 82 chr5 194672411 194672570 -8412962 + MLT1B LTR MaLR 2 170 -220 1911 158 0 20 chr5 194672570 194672874 -8412658 - AluJo SINE Alu -14 298 1 1799 159 17 82 chr5 194672874 194673128 -8412404 + MLT1B LTR MaLR 170 388 -2 254 310 193 42 chr5 194673203 194673598 -8411934 + L2 LINE L2 2766 3230 -83 319 206 0 0 chr5 194673602 194673665 -8411867 - MLT1D LTR MaLR -7 619 557 2166 111 10 7 chr5 194673687 194673976 -8411556 - AluSp SINE Alu -19 294 5 1407 192 167 20 chr5 194673982 194674377 -8411155 - MLT1D LTR MaLR -52 453 1 191 313 60 0 chr5 194674377 194674460 -8411072 + L2 LINE L2 3225 3312 -1 660 309 37 9 chr5 194674467 194674684 -8410848 - MIR SINE MIR -12 250 28 2393 104 0 0 chr5 194674828 194675135 -8410397 + AluSq SINE Alu 1 307 -6 271 250 76 11 chr5 194675257 194675349 -8410183 + MER5A DNA MER1_type 7 104 -85 225 135 0 73 chr5 194677021 194677117 -8408415 + (CACCC)n Simple_repeat Simple_repeat 5 93 0 446 290 168 0 chr5 194677369 194677524 -8408008 + MER5A DNA MER1_type 9 189 0 792 241 52 8 chr5 194677787 194678036 -8407496 - MER102b DNA MER1_type -10 331 72 2281 109 3 6 chr5 194678047 194678360 -8407172 + AluSx SINE Alu 1 312 0 360 257 9 71 chr5 194678388 194678501 -8407031 - L2 LINE L2 -31 3241 3136 278 313 62 81 chr5 194678485 194679009 -8406523 - L2 LINE L2 -277 2995 2487 * 354 210 60 10 chr5 194679337 194679437 -8406095 + MIR SINE MIR 133 237 -25 222 263 0 26 chr5 194679461 194679537 -8405995 + (TTA)n Simple_repeat Simple_repeat 1 74 0 701 245 73 39 chr5 194679633 194679866 -8405666 + MIR SINE MIR 2 242 -20 1273 225 143 21 chr5 194680035 194680462 -8405070 + MLT1D LTR MaLR 27 505 0 407 296 25 43 chr5 194680521 194680683 -8404849 - MIR3 SINE MIR -49 159 1 2246 116 7 0 chr5 194680906 194681216 -8404316 - AluSp SINE Alu -1 312 1 331 240 230 61 chr5 194681518 194681714 -8403818 - MIR SINE MIR -12 250 22 474 279 38 6 chr5 194681734 194681892 -8403640 - MER5B DNA MER1_type -3 175 13 370 200 95 11 chr5 194682160 194682255 -8403277 - MIR SINE MIR -62 146 44 347 312 30 45 chr5 194682738 194682940 -8402592 - MIR SINE MIR -7 255 57 241 343 49 10 chr5 194683128 194683230 -8402302 - MIR3 SINE MIR 0 208 103 243 125 0 0 chr5 194683301 194683341 -8402191 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 407 256 30 77 chr5 194683366 194683534 -8401998 - MIR SINE MIR -56 206 47 652 296 93 29 chr5 194684100 194684478 -8401054 - MER113 DNA MER1_type? -54 467 66 241 319 90 68 chr5 194684913 194685179 -8400353 + L2 LINE L2 2992 3263 -9 623 320 52 4 chr5 194685194 194685425 -8400107 - MIR SINE MIR -2 260 19 351 0 0 0 chr5 194685453 194685492 -8400040 + (CA)n Simple_repeat Simple_repeat 1 39 0 2507 71 3 6 chr5 194686155 194686466 -8399066 + AluY SINE Alu 2 311 0 335 331 96 11 chr5 194686518 194686696 -8398836 - MIR SINE MIR 0 262 70 1161 182 0 0 chr5 194686807 194686994 -8398538 - MER5A DNA MER1_type 0 189 3 211 304 0 13 chr5 194687040 194687057 -8398475 - MIR SINE MIR -61 147 131 2551 50 7 3 chr5 194687057 194687360 -8398172 - AluY SINE Alu -7 304 1 211 304 0 13 chr5 194687360 194687425 -8398107 - MIR SINE MIR -77 131 87 198 289 105 13 chr5 194687447 194687523 -8398009 - MIR SINE MIR -96 112 30 320 320 55 16 chr5 194688079 194688207 -8397325 - MIR SINE MIR -97 165 33 282 227 0 13 chr5 194688252 194688327 -8397205 + MER103 DNA DNA 82 155 -11 261 83 0 0 chr5 194688574 194688610 -8396922 + (CA)n Simple_repeat Simple_repeat 2 37 0 275 245 75 19 chr5 194688781 194688887 -8396645 + MIR SINE MIR 22 133 -75 604 285 35 0 chr5 194689049 194689249 -8396283 - MER3 DNA MER1_type 0 209 3 741 194 65 0 chr5 194689419 194689558 -8395974 - FRAM SINE Alu -16 150 3 316 323 10 0 chr5 194690034 194690130 -8395402 + MIR SINE MIR 50 146 -116 1459 206 49 11 chr5 194690702 194691052 -8394480 - L1MC2 LINE L1 0 6344 5982 298 286 9 38 chr5 194691121 194691226 -8394306 + L2 LINE L2 3134 3235 -37 252 86 0 0 chr5 194691241 194691276 -8394256 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 207 0 0 0 chr5 194691739 194691762 -8393770 + (T)n Simple_repeat Simple_repeat 1 23 0 328 212 0 0 chr5 194692666 194692732 -8392800 - MLT1B LTR MaLR -83 307 242 1510 195 58 25 chr5 194692952 194693311 -8392221 - MLT1A2 LTR MaLR 0 374 4 625 248 131 5 chr5 194693748 194693954 -8391578 + MIR SINE MIR 7 238 -24 303 301 54 37 chr5 194694375 194694598 -8390934 + L1ME3A LINE L1 5719 5946 -224 35 0 0 22 chr5 194694985 194695011 -8390521 + AT_rich Low_complexity Low_complexity 1 27 -18 2271 102 3 3 chr5 194695011 194695306 -8390226 + AluSx SINE Alu 1 295 -17 35 0 0 22 chr5 194695306 194695325 -8390207 + AT_rich Low_complexity Low_complexity 27 45 0 338 297 41 62 chr5 194695779 194695974 -8389558 + L2 LINE L2 3004 3194 -78 475 290 8 0 chr5 194696011 194696135 -8389397 + L2 LINE L2 3189 3313 0 462 330 17 6 chr5 194696166 194696342 -8389190 + MIR SINE MIR 64 241 -21 242 236 0 14 chr5 194696821 194696893 -8388639 + MIR SINE MIR 67 137 -71 2233 112 6 16 chr5 194696902 194697216 -8388316 - AluSx SINE Alu -1 311 1 27 29 0 0 chr5 194697332 194697366 -8388166 + AT_rich Low_complexity Low_complexity 1 34 0 437 301 29 65 chr5 194697774 194698020 -8387512 + L2 LINE L2 3073 3309 -4 728 184 19 0 chr5 194698021 194698289 -8387243 + (TGGA)n Simple_repeat Simple_repeat 1 273 0 337 307 89 59 chr5 194698604 194698874 -8386658 - L2 LINE L2 -2 3270 2993 754 263 76 4 chr5 194700008 194700244 -8385288 - Charlie8 DNA MER1_type -2152 265 13 264 322 58 25 chr5 194700347 194700468 -8385064 + MIR SINE MIR 19 143 -65 324 277 0 20 chr5 194700584 194700685 -8384847 - MIR SINE MIR -156 106 8 527 300 221 11 chr5 194701166 194701636 -8383896 + L2 LINE L2 2370 2938 -376 292 297 6 2 chr5 194701659 194701765 -8383767 + MIR SINE MIR 85 193 -15 729 326 39 21 chr5 194702066 194702499 -8383033 - L1ME3A LINE L1 -201 5969 5529 415 356 103 3 chr5 194702962 194703350 -8382182 + L2 LINE L2 2878 3304 -9 2210 117 7 3 chr5 194703450 194703750 -8381782 + AluSx SINE Alu 1 301 -11 249 352 37 37 chr5 194703866 194703965 -8381567 - L1MA5A LINE L1 -272 6025 5927 755 284 60 27 chr5 194703965 194704299 -8381233 - L1MC4a LINE L1 -1879 5929 5585 834 147 167 0 chr5 194704808 194704958 -8380574 + MER20 DNA MER1_type 29 203 -16 684 280 19 14 chr5 194704978 194705192 -8380340 - MIR SINE MIR -14 248 34 336 291 11 33 chr5 194705768 194705950 -8379582 + (TG)n Simple_repeat Simple_repeat 2 179 0 324 0 0 0 chr5 194706028 194706064 -8379468 + (TG)n Simple_repeat Simple_repeat 1 36 0 336 24 0 0 chr5 194706066 194706107 -8379425 + (GA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5 194706753 194706782 -8378750 + AT_rich Low_complexity Low_complexity 1 29 0 254 164 0 33 chr5 194707232 194707293 -8378239 + G-rich Low_complexity Low_complexity 4 62 0 212 280 37 65 chr5 194707661 194707768 -8377764 + L2 LINE L2 2951 3054 -218 243 273 202 0 chr5 194707850 194707949 -8377583 + L2 LINE L2 3185 3303 -10 188 331 51 19 chr5 194708297 194708454 -8377078 - MIR3 SINE MIR 0 208 47 * 415 308 47 0 chr5 194708441 194708610 -8376922 + MIR SINE MIR 19 195 -67 314 306 29 104 chr5 194708624 194708931 -8376601 - L2 LINE L2 -18 3295 3012 212 308 0 31 chr5 194709168 194709233 -8376299 + (CGTG)n Simple_repeat Simple_repeat 1 63 0 2167 78 48 0 chr5 194709777 194710076 -8375456 + AluY SINE Alu 1 312 0 483 306 96 18 chr5 194710077 194710306 -8375226 - MIR SINE MIR -1 261 15 3324 221 61 13 chr5 194710609 194711365 -8374167 - MER21B LTR ERV1 -53 810 19 407 210 0 25 chr5 194711386 194711467 -8374065 - MER21B LTR ERV1 -773 90 12 5103 180 35 21 chr5 194711844 194712111 -8373421 + L1PA16 LINE L1 4135 4397 -1769 378 42 0 0 chr5 194712111 194712159 -8373373 + (CA)n Simple_repeat Simple_repeat 2 49 0 5103 180 35 21 chr5 194712159 194712777 -8372755 + L1PA16 LINE L1 4397 5005 -1161 1895 171 13 3 chr5 194712777 194713082 -8372450 + AluJb SINE Alu 3 310 -2 5103 180 35 21 chr5 194713082 194714189 -8371343 + L1PA16 LINE L1 5005 6165 -1 367 246 9 45 chr5 194714314 194714424 -8371108 + MIR SINE MIR 20 125 -83 356 328 151 5 chr5 194714702 194714894 -8370638 + MIR SINE MIR 31 250 -12 1083 206 21 12 chr5 194715014 194715257 -8370275 - MLT1H LTR MaLR -298 251 7 935 239 151 7 chr5 194715902 194716186 -8369346 + HAL1 LINE L1 535 859 -1648 502 288 36 72 chr5 194717663 194717913 -8367619 - L2 LINE L2 0 3313 3073 293 285 1 63 chr5 194718339 194718481 -8367051 + MIR SINE MIR 54 188 -20 310 339 55 55 chr5 194718639 194718822 -8366710 + MIR SINE MIR 59 241 -21 575 317 84 2 chr5 194718856 194719098 -8366434 - MIR SINE MIR -3 259 3 201 175 25 0 chr5 194719304 194719336 -8366196 - L2 LINE L2 -94 3178 3146 505 200 69 69 chr5 194719336 194719511 -8366021 + MIR SINE MIR 2 176 -86 263 299 177 14 chr5 194719651 194719798 -8365734 - MIR SINE MIR -14 248 78 703 174 0 49 chr5 194720605 194720749 -8364783 - MLT2D LTR ERVL 0 414 278 * 857 159 70 0 chr5 194720731 194720888 -8364644 + MER20 DNA MER1_type 44 211 -8 1190 189 21 31 chr5 194721060 194721200 -8364332 + MER33 DNA MER1_type 9 149 -2436 1996 153 7 0 chr5 194721200 194721494 -8364038 + AluJb SINE Alu 1 296 -16 1190 189 21 31 chr5 194721494 194721644 -8363888 + MER33 DNA MER1_type 149 296 -28 1523 109 142 8 chr5 194721763 194722039 -8363493 - AluSg1 SINE Alu 0 309 1 410 358 0 11 chr5 194723069 194723256 -8362276 - MIR SINE MIR -59 203 19 267 391 48 5 chr5 194724235 194724424 -8361108 + MIR SINE MIR 47 243 -19 559 268 92 6 chr5 194725034 194725198 -8360334 + MIR SINE MIR 38 215 -47 2429 54 41 0 chr5 194725232 194725526 -8360006 - AluY SINE Alu -5 306 1 441 296 17 45 chr5 194725564 194725743 -8359789 + L2 LINE L2 2917 3090 -182 215 328 35 9 chr5 194726150 194726266 -8359266 + MIR3 SINE MIR 6 124 -84 455 311 49 58 chr5 194726685 194727013 -8358519 + L2 LINE L2 2989 3313 0 288 77 0 0 chr5 194727031 194727070 -8358462 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 592 250 40 45 chr5 194727327 194727527 -8358005 + MIR SINE MIR 13 211 -51 184 318 196 20 chr5 194727908 194728056 -8357476 - MIR3 SINE MIR -2 206 33 2137 66 36 70 chr5 194728166 194728467 -8357065 + AluSc SINE Alu 1 291 -18 239 237 53 13 chr5 194728713 194728789 -8356743 - MLT1L LTR MaLR -347 268 190 1190 202 83 95 chr5 194728827 194729357 -8356175 - L2 LINE L2 0 3313 2773 2284 119 3 0 chr5 194729357 194729667 -8355865 - AluSq SINE Alu -2 311 1 1190 202 83 95 chr5 194729667 194729743 -8355789 - L2 LINE L2 -540 2773 2698 819 183 18 6 chr5 194729743 194729912 -8355620 - MER5B DNA MER1_type 0 178 8 745 241 106 60 chr5 194729920 194730269 -8355263 + L2 LINE L2 2216 2580 -734 531 233 88 6 chr5 194730321 194730480 -8355052 - MER5B DNA MER1_type -6 172 1 318 276 47 12 chr5 194730480 194730633 -8354899 - L2 LINE L2 -1090 2224 2066 219 286 0 0 chr5 194730871 194730976 -8354556 + GA-rich Low_complexity Low_complexity 1 105 0 203 327 37 9 chr5 194731411 194731518 -8354014 - MIR3 SINE MIR -93 115 6 222 118 0 0 chr5 194731708 194731742 -8353790 + (AGGGGG)n Simple_repeat Simple_repeat 5 38 0 343 293 43 26 chr5 194731744 194731860 -8353672 - MLT1A2 LTR MaLR -186 188 71 * 388 191 0 0 chr5 194731857 194731925 -8353607 - MLT1J1 LTR MaLR -343 103 36 1051 143 0 77 chr5 194732127 194732323 -8353209 + AluJb SINE Alu 132 312 0 424 324 183 17 chr5 194732538 194732958 -8352574 - L1MC4a LINE L1 -1709 6099 5610 2257 188 60 14 chr5 194733343 194733826 -8351706 + MLT1D LTR MaLR 1 505 0 480 314 36 36 chr5 194733887 194734110 -8351422 + MIR SINE MIR 40 262 0 325 237 0 0 chr5 194734336 194734412 -8351120 + MIR SINE MIR 66 141 -121 423 309 53 7 chr5 194734515 194734667 -8350865 - MER69A DNA AcHobo 0 177 19 241 119 107 71 chr5 194734972 194735056 -8350476 - MER53 DNA DNA -15 174 88 * 364 131 37 4 chr5 194734985 194735090 -8350442 + MER53 DNA DNA 38 189 0 1057 159 14 32 chr5 194735561 194735781 -8349751 - MER20 DNA MER1_type -3 216 1 3676 97 28 87 chr5 194735808 194736513 -8349019 + MER4A LTR ERV1 1 664 0 1506 156 86 4 chr5 194736599 194736868 -8348664 + AluJb SINE Alu 1 291 -21 702 294 82 25 chr5 194736874 194737241 -8348291 - L1MC4a LINE L1 -1888 5920 5533 689 314 8 11 chr5 194737249 194737419 -8348113 - MIR SINE MIR 0 262 92 2424 92 0 0 chr5 194737419 194737722 -8347810 + AluY SINE Alu 1 303 -8 689 314 8 11 chr5 194737722 194737812 -8347720 - MIR SINE MIR -170 92 3 372 296 160 8 chr5 194737812 194737971 -8347561 - MIR SINE MIR -75 133 2 286 325 17 8 chr5 194738108 194738225 -8347307 + MIR SINE MIR 25 142 -120 696 299 30 0 chr5 194738313 194738547 -8346985 - LTR16C LTR ERVL 0 491 251 237 250 18 0 chr5 194738892 194738948 -8346584 - L2 LINE L2 -1 3312 3256 2601 57 3 0 chr5 194738963 194739264 -8346268 + AluY SINE Alu 1 302 -9 1243 186 114 37 chr5 194739264 194739614 -8345918 - L1MC2 LINE L1 -11 6333 5957 564 257 128 18 chr5 194739614 194739832 -8345700 - L2 LINE L2 -61 3252 3011 1731 166 49 39 chr5 194739962 194740055 -8345477 + MLT1B LTR MaLR 1 92 -298 2009 129 3 36 chr5 194740055 194740358 -8345174 - AluSx SINE Alu -17 295 3 1731 166 49 39 chr5 194740358 194740650 -8344882 + MLT1B LTR MaLR 92 390 0 416 330 29 29 chr5 194740884 194741093 -8344439 + MIR SINE MIR 25 233 -29 273 243 14 14 chr5 194741482 194741552 -8343980 + MIR3 SINE MIR 106 175 -33 578 323 13 25 chr5 194741624 194741859 -8343673 - MIR SINE MIR -11 251 20 201 132 0 0 chr5 194742108 194742146 -8343386 + (CA)n Simple_repeat Simple_repeat 2 39 0 2127 136 0 0 chr5 194742200 194742495 -8343037 + AluJb SINE Alu 6 300 -12 296 254 118 18 chr5 194742820 194742930 -8342602 + MIR3 SINE MIR 46 166 -42 550 294 36 48 chr5 194743031 194743288 -8342244 - MIR SINE MIR 0 262 12 444 186 0 101 chr5 194744287 194744416 -8341116 - MIR SINE MIR -81 181 66 182 293 182 20 chr5 194744431 194744530 -8341002 + MIR SINE MIR 119 233 -29 294 125 0 0 chr5 194744534 194744582 -8340950 + (TTCCC)n Simple_repeat Simple_repeat 5 52 0 227 256 110 24 chr5 194744604 194744686 -8340846 - L2 LINE L2 -16 3297 3209 190 266 39 133 chr5 194744918 194745046 -8340486 - MIR3 SINE MIR -83 125 10 * 267 339 175 23 chr5 194745020 194745368 -8340164 - L3 LINE CR1 -155 1422 1022 356 281 125 12 chr5 194745484 194745644 -8339888 - MIR SINE MIR -7 255 78 183 294 34 67 chr5 194745837 194745956 -8339576 - L3 LINE CR1 -909 668 554 184 325 125 12 chr5 194747158 194747238 -8338294 + L2 LINE L2 3179 3267 -5 290 315 185 22 chr5 194748139 194748323 -8337209 + MIR SINE MIR 21 234 -28 778 236 83 91 chr5 194748498 194748980 -8336552 - MLT1J LTR MaLR 0 511 34 1467 231 59 24 chr5 194749600 194750113 -8335419 - MLT1F1 LTR MaLR 0 567 36 272 322 69 30 chr5 194750163 194750365 -8335167 + L2 LINE L2 2843 3052 -220 271 312 13 13 chr5 194751582 194751659 -8333873 - L2 LINE L2 -3 3310 3234 1970 133 22 0 chr5 194751691 194751969 -8333563 + AluSx SINE Alu 28 311 -1 213 377 88 15 chr5 194752279 194752621 -8332911 - L2 LINE L2 -460 2854 2488 1315 173 53 60 chr5 194752712 194752996 -8332536 + AluJb SINE Alu 12 293 -19 421 234 177 14 chr5 194753190 194753399 -8332133 - MLT1L LTR MaLR -3 612 370 2329 105 0 0 chr5 194754049 194754345 -8331187 - AluSp SINE Alu -17 296 1 223 211 13 26 chr5 194755136 194755212 -8330320 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 308 330 118 5 chr5 194755433 194755636 -8329896 + MIR SINE MIR 37 262 0 214 384 0 0 chr5 194755630 194755703 -8329829 - L2 LINE L2 0 3272 3200 * 372 222 56 44 chr5 194755712 194755802 -8329730 - L2 LINE L2 0 3272 3182 587 226 0 29 chr5 194755893 194756030 -8329502 - MIR SINE MIR -110 152 20 207 69 0 0 chr5 194756224 194756253 -8329279 + (TG)n Simple_repeat Simple_repeat 2 30 0 188 211 13 0 chr5 194756354 194756430 -8329102 + (TG)n Simple_repeat Simple_repeat 2 78 0 256 280 0 0 chr5 194756464 194756557 -8328975 + (TG)n Simple_repeat Simple_repeat 1 93 0 272 326 136 8 chr5 194756673 194756805 -8328727 - L3 LINE CR1 -1189 388 240 2491 44 7 7 chr5 194756856 194757152 -8328380 + AluY SINE Alu 11 306 -5 373 215 62 39 chr5 194757214 194757344 -8328188 + MIR SINE MIR 19 151 -57 301 345 21 35 chr5 194757420 194757565 -8327967 + MIR3 SINE MIR 3 145 -63 219 212 307 36 chr5 194758033 194758170 -8327362 + L2 LINE L2 2932 3105 -167 703 261 5 27 chr5 194758639 194758823 -8326709 + MIR SINE MIR 13 192 -70 1163 201 42 0 chr5 194759176 194759390 -8326142 + MER58A DNA MER1_type 1 223 -1 276 322 122 39 chr5 194759764 194759969 -8325563 + L2 LINE L2 2631 2852 -462 264 392 29 23 chr5 194760047 194760218 -8325314 + L2 LINE L2 2926 3097 -175 863 219 36 10 chr5 194760346 194760413 -8325119 + MIR SINE MIR 7 71 -191 562 61 0 37 chr5 194760413 194760495 -8325037 - MADE1 DNA Mariner -1 79 1 863 219 36 10 chr5 194760495 194760619 -8324913 + MIR SINE MIR 71 203 -59 230 291 39 10 chr5 194760670 194760773 -8324759 - L1MC4 LINE L1 -1341 6701 6596 187 146 0 42 chr5 194760816 194760864 -8324668 + (TG)n Simple_repeat Simple_repeat 1 46 0 * 620 98 53 0 chr5 194760863 194760996 -8324536 + GA-rich Low_complexity Low_complexity 1 140 0 373 259 196 0 chr5 194761104 194761216 -8324316 + L2 LINE L2 3137 3270 -2 239 300 90 0 chr5 194761778 194761878 -8323654 - L2 LINE L2 -18 3254 3146 606 306 102 15 chr5 194761915 194762121 -8323411 - MIR SINE MIR -6 256 33 456 154 123 69 chr5 194762298 194762428 -8323104 + MIR3 SINE MIR 10 146 -62 580 290 34 24 chr5 194762855 194763062 -8322470 - MIR SINE MIR -2 260 52 1949 141 6 52 chr5 194763159 194763485 -8322047 + AluJo SINE Alu 1 311 -1 293 337 153 34 chr5 194763510 194763722 -8321810 - L2 LINE L2 -3 3310 3125 2559 67 0 6 chr5 194763722 194764034 -8321498 + AluY SINE Alu 1 310 -1 293 337 153 34 chr5 194764034 194764102 -8321430 - L2 LINE L2 -188 3125 3067 1240 171 19 9 chr5 194764102 194764318 -8321214 - MER20 DNA MER1_type -1 218 1 293 337 153 34 chr5 194764318 194764454 -8321078 - L2 LINE L2 -246 3067 2843 223 261 14 43 chr5 194764493 194764562 -8320970 - L2 LINE L2 -8 3305 3239 436 221 44 35 chr5 194765465 194765578 -8319954 + MER81 DNA DNA 1 114 0 224 170 43 0 chr5 194765682 194765729 -8319803 - L2 LINE L2 0 3272 3224 1876 170 25 22 chr5 194766289 194766653 -8318879 + MLT1A1 LTR MaLR 1 365 0 1312 219 28 72 chr5 194766900 194767357 -8318175 - MER113 DNA MER1_type? -77 444 8 658 245 130 23 chr5 194767801 194768017 -8317515 - MIR SINE MIR -2 260 22 258 128 0 0 chr5 194768123 194768162 -8317370 - L2 LINE L2 -3 3310 3272 270 291 99 64 chr5 194768354 194768495 -8317037 + MIR SINE MIR 47 192 -70 2506 155 19 16 chr5 194768725 194769157 -8316375 - Tigger2a DNA MER2_type -1 433 1 382 287 203 66 chr5 194769169 194769696 -8315836 + L2 LINE L2 2730 3313 0 519 260 28 87 chr5 194769779 194769827 -8315705 - L1ME LINE L1 -299 5822 5773 2097 116 65 0 chr5 194769827 194770120 -8315412 - AluSx SINE Alu 0 312 1 519 260 28 87 chr5 194770120 194770359 -8315173 - L1ME LINE L1 -348 5773 5552 603 346 48 4 chr5 194771042 194771273 -8314259 + MIR SINE MIR 9 249 -13 1986 150 3 3 chr5 194771281 194771588 -8313944 + AluSx SINE Alu 1 307 -5 361 259 109 34 chr5 194771946 194772093 -8313439 - MIR SINE MIR -32 230 73 23 0 0 0 chr5 194772139 194772162 -8313370 + AT_rich Low_complexity Low_complexity 1 23 0 256 187 200 0 chr5 194772710 194772785 -8312747 + MIR SINE MIR 86 175 -87 431 154 51 3 chr5 194772792 194772930 -8312602 - MER53 DNA DNA 0 189 2 368 226 137 24 chr5 194773457 194773581 -8311951 + L2 LINE L2 3138 3275 -38 1672 203 0 3 chr5 194773650 194774133 -8311399 + AluJo SINE Alu 6 312 0 234 128 0 0 chr5 194775008 194775047 -8310485 + (CA)n Simple_repeat Simple_repeat 1 39 0 1978 87 13 26 chr5 194775270 194775580 -8309952 + L1MA5A LINE L1 5992 6297 0 311 291 71 16 chr5 194775600 194775782 -8309750 + MLT1J LTR MaLR 320 511 0 656 262 46 46 chr5 194775804 194776041 -8309491 + L2 LINE L2 3077 3313 0 322 375 51 28 chr5 194776203 194776379 -8309153 - L2 LINE L2 -13 3259 3080 341 336 46 76 chr5 194776395 194776657 -8308875 + L2 LINE L2 2987 3240 -32 212 298 32 48 chr5 194776970 194777158 -8308374 + L2 LINE L2 2852 3036 -236 509 281 73 0 chr5 194777450 194777642 -8307890 + MLT1K LTR MaLR 41 246 -342 386 319 115 13 chr5 194777902 194778059 -8307473 + MIR3 SINE MIR 8 180 -28 744 249 158 78 chr5 194778238 194778297 -8307235 - MLT1K LTR MaLR -2 586 533 2190 117 0 25 chr5 194778297 194778613 -8306919 + AluSg SINE Alu 3 310 0 744 249 158 78 chr5 194778613 194779090 -8306442 - MLT1K LTR MaLR -55 533 7 190 288 128 82 chr5 194779734 194780172 -8305360 - L2 LINE L2 -2 3270 2813 576 234 72 12 chr5 194780862 194781029 -8304503 - MER115 DNA AcHobo -48 645 469 889 308 81 3 chr5 194781084 194781418 -8304114 - MER115 DNA AcHobo -327 366 7 246 95 0 0 chr5 194781455 194781497 -8304035 + (TTAA)n Simple_repeat Simple_repeat 3 44 0 1845 141 7 24 chr5 194781497 194781787 -8303745 - AluSx SINE Alu -26 286 2 2114 119 0 42 chr5 194782461 194782773 -8302759 - AluSc SINE Alu -10 299 1 1160 272 62 11 chr5 194782934 194783302 -8302230 - L2 LINE L2 0 3313 2927 1459 165 129 11 chr5 194783336 194783615 -8301917 + AluJo SINE Alu 1 312 0 376 247 76 51 chr5 194783777 194783935 -8301597 - MIR SINE MIR -95 167 6 201 237 17 34 chr5 194784451 194784510 -8301022 - L2 LINE L2 -5 3308 3251 212 261 183 7 chr5 194784580 194784733 -8300799 - L2 LINE L2 -203 3069 2890 217 158 26 0 chr5 194785220 194785258 -8300274 + MIR SINE MIR 95 133 -75 213 314 78 99 chr5 194785459 194785803 -8299729 - L2 LINE L2 0 3272 2936 368 325 7 53 chr5 194786077 194786228 -8299304 + MIR3 SINE MIR 64 207 -1 327 274 0 0 chr5 194786514 194786587 -8298945 - MIR SINE MIR -71 191 119 1283 147 30 117 chr5 194787792 194788126 -8297406 - AluYb8 SINE Alu -13 305 1 481 276 115 26 chr5 194789182 194789374 -8296158 + MIR SINE MIR 2 210 -52 379 337 29 23 chr5 194789578 194789750 -8295782 - MIR SINE MIR -12 250 78 276 194 0 0 chr5 194789752 194789802 -8295730 + (CA)n Simple_repeat Simple_repeat 2 54 -9 225 65 0 0 chr5 194789809 194789840 -8295692 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 2213 101 3 7 chr5 194789840 194790129 -8295403 - AluSp SINE Alu -23 290 1 276 194 0 0 chr5 194790129 194790140 -8295392 + (CA)n Simple_repeat Simple_repeat 53 63 0 258 242 0 0 chr5 194790178 194790244 -8295288 + (CA)n Simple_repeat Simple_repeat 1 66 0 1992 145 10 0 chr5 194790939 194791235 -8294297 + AluSx SINE Alu 1 299 -13 232 304 88 32 chr5 194791235 194791360 -8294172 - L2 LINE L2 -18 3295 3164 2159 180 84 2 chr5 194791422 194791888 -8293644 + L1MB3 LINE L1 5680 6183 0 2246 99 3 3 chr5 194791892 194792184 -8293348 - AluSg SINE Alu -18 292 1 688 114 121 0 chr5 194792968 194793134 -8292398 - AluSp SINE Alu -126 187 2 258 242 0 0 chr5 194793184 194793250 -8292282 + (CA)n Simple_repeat Simple_repeat 1 66 0 2092 151 0 0 chr5 194793939 194794238 -8291294 + AluSx SINE Alu 1 299 -13 282 339 62 8 chr5 194794238 194794368 -8291164 - L2 LINE L2 -18 3295 3159 2253 175 72 34 chr5 194794403 194794901 -8290631 + L1MB3 LINE L1 5667 6183 0 2073 103 3 3 chr5 194794905 194795197 -8290335 - AluSg SINE Alu -18 292 1 355 299 29 75 chr5 194795312 194795486 -8290046 - L2 LINE L2 -454 2860 2702 2175 109 0 0 chr5 194795486 194795797 -8289735 + AluSx SINE Alu 1 311 -1 355 299 29 75 chr5 194795797 194795900 -8289632 - L2 LINE L2 -612 2702 2596 616 355 33 12 chr5 194796157 194796402 -8289130 + MIR SINE MIR 12 261 -1 1684 172 3 3 chr5 194796781 194797084 -8288448 + AluJo SINE Alu 1 303 -9 2604 127 32 114 chr5 194797089 194797101 -8288431 + L1MB2 LINE L1 5634 5645 -526 1700 153 43 55 chr5 194797101 194797237 -8288295 + MER2 DNA MER2_type 2 138 -206 1831 129 19 42 chr5 194797237 194797547 -8287985 - AluSx SINE Alu -9 303 1 1700 153 43 55 chr5 194797547 194797757 -8287775 + MER2 DNA MER2_type 138 344 0 2604 127 32 114 chr5 194797757 194798329 -8287203 + L1MB2 LINE L1 5645 6170 -1 280 318 82 0 chr5 194798384 194798494 -8287038 + MIR SINE MIR 134 252 -10 2798 271 75 26 chr5 194798626 194799957 -8285575 + L2 LINE L2 1920 3309 -4 255 170 0 0 chr5 194800577 194800624 -8284908 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 194801814 194801843 -8283689 + GC_rich Low_complexity Low_complexity 1 29 0 1900 142 0 29 chr5 194801976 194802292 -8283240 + AluJb SINE Alu 1 307 -5 206 266 133 44 chr5 194802374 194802397 -8283135 + MIR SINE MIR 80 100 -162 327 200 67 0 chr5 194802397 194802472 -8283060 + MER116 DNA Mariner 1 80 0 206 266 133 44 chr5 194802472 194802561 -8282971 + MIR SINE MIR 100 202 -60 511 263 186 76 chr5 194802714 194802843 -8282689 - HAL1 LINE L1 -1414 1093 980 2285 87 6 6 chr5 194802843 194803154 -8282378 - AluSx SINE Alu -1 311 1 511 263 186 76 chr5 194803154 194803643 -8281889 - HAL1 LINE L1 -1527 980 407 804 204 3 10 chr5 194803676 194804416 -8281116 + (TGG)n Simple_repeat Simple_repeat 1 734 0 878 188 0 4 chr5 194804440 194804674 -8280858 + (TGG)n Simple_repeat Simple_repeat 1 233 0 2822 126 12 16 chr5 194804676 194805106 -8280426 + MSTA LTR MaLR 1 428 0 5845 110 20 9 chr5 194805303 194807181 -8278351 + L1PA16 LINE L1 4281 6166 0 315 0 0 0 chr5 194807506 194807541 -8277991 + (TG)n Simple_repeat Simple_repeat 2 36 0 1887 148 14 77 chr5 194807656 194808022 -8277510 + MLT1B LTR MaLR 1 343 -47 438 20 0 0 chr5 194808033 194808084 -8277448 + (CA)n Simple_repeat Simple_repeat 1 51 0 324 294 48 24 chr5 194808122 194808248 -8277284 - HAL1 LINE L1 -2377 130 2 741 260 35 31 chr5 194809379 194809606 -8275926 + MIR SINE MIR 21 248 -14 717 262 113 11 chr5 194809904 194810179 -8275353 - L1ME4a LINE L1 -218 5903 5601 272 209 88 33 chr5 194810221 194810312 -8275220 - L1ME4a LINE L1 -619 5502 5407 2199 100 0 0 chr5 194811937 194812237 -8273295 + AluSc SINE Alu 1 300 -9 534 325 98 0 chr5 194812240 194812434 -8273098 + MIR SINE MIR 28 240 -22 247 269 0 0 chr5 194812484 194812551 -8272981 + MLT1L LTR MaLR 1 67 -548 434 261 58 106 chr5 194812620 194812700 -8272832 + MLT1L LTR MaLR 202 284 -331 1115 162 199 46 chr5 194812700 194813071 -8272461 - MSTC LTR MaLR 0 428 1 434 261 58 106 chr5 194813071 194813216 -8272316 + MLT1L LTR MaLR 284 416 -199 284 368 35 0 chr5 194813811 194813925 -8271607 + L2 LINE L2 3155 3272 0 326 338 37 60 chr5 194813998 194814214 -8271318 + MIR SINE MIR 4 214 -48 1033 146 12 0 chr5 194814269 194814433 -8271099 - MER5A DNA MER1_type -23 166 1 282 29 0 0 chr5 194814516 194814551 -8270981 + (CA)n Simple_repeat Simple_repeat 2 36 0 862 198 154 37 chr5 194814938 194815137 -8270395 + MER33 DNA MER1_type 2 243 -2342 2163 97 0 0 chr5 194815137 194815425 -8270107 - AluSg SINE Alu -3 307 20 862 198 154 37 chr5 194815425 194815498 -8270034 + MER33 DNA MER1_type 243 306 -18 216 122 0 0 chr5 194815573 194815614 -8269918 + (TG)n Simple_repeat Simple_repeat 1 41 0 448 250 257 0 chr5 194815837 194815981 -8269551 + MIR SINE MIR 2 182 -80 327 95 4 21 chr5 194816010 194816057 -8269475 - MADE1 DNA Mariner -3 77 73 2408 68 7 0 chr5 194816057 194816366 -8269166 + AluY SINE Alu 1 311 0 327 95 4 21 chr5 194816366 194816438 -8269094 - MADE1 DNA Mariner -7 73 1 * 1289 221 45 8 chr5 194816438 194816744 -8268788 - MLT1A1 LTR MaLR -43 347 2 405 283 0 3 chr5 194817738 194817855 -8267677 - MIR SINE MIR -41 167 53 321 256 18 89 chr5 194818167 194818335 -8267197 + MIR3 SINE MIR 38 193 -15 337 317 29 0 chr5 194818862 194818966 -8266566 - MIR SINE MIR -84 178 72 25 65 0 0 chr5 194819087 194819133 -8266399 + AT_rich Low_complexity Low_complexity 1 46 0 1255 204 18 0 chr5 194819822 194820042 -8265490 + MER58A DNA MER1_type 1 224 0 457 267 0 25 chr5 194820063 194820183 -8265349 + MIR SINE MIR 53 169 -93 548 299 31 63 chr5 194820255 194820509 -8265023 + MLT1I LTR MaLR 99 344 -65 300 239 9 64 chr5 194820544 194820653 -8264879 + MIR SINE MIR 158 260 -2 264 292 73 10 chr5 194820738 194820834 -8264698 - L2 LINE L2 -1 3271 3170 333 331 12 25 chr5 194820889 194821049 -8264483 - L2 LINE L2 -244 3028 2871 227 269 0 0 chr5 194821295 194821347 -8264185 + MLT1L LTR MaLR 343 394 -221 334 258 11 34 chr5 194821612 194821701 -8263831 - MIR SINE MIR -121 141 55 727 234 159 31 chr5 194822449 194822676 -8262856 + MIR SINE MIR 7 262 0 213 196 0 0 chr5 194823238 194823284 -8262248 + (TG)n Simple_repeat Simple_repeat 2 47 0 572 303 96 23 chr5 194823375 194823593 -8261939 - MIR SINE MIR -11 251 18 381 240 21 21 chr5 194823649 194823745 -8261787 - MER5A DNA MER1_type -85 104 9 365 241 93 9 chr5 194823864 194823972 -8261560 + MIR SINE MIR 38 154 -108 980 273 88 40 chr5 194824583 194825038 -8260494 + MLT1H LTR MaLR 73 549 0 860 238 32 11 chr5 194825123 194825308 -8260224 + MER5A DNA MER1_type 1 189 0 417 299 84 19 chr5 194825316 194825470 -8260062 + MER5B DNA MER1_type 1 164 -14 473 236 230 0 chr5 194825519 194825667 -8259865 - MER5A DNA MER1_type -2 187 6 318 353 67 33 chr5 194825837 194825987 -8259545 - L2 LINE L2 -219 3053 2899 191 333 29 39 chr5 194826036 194826138 -8259394 - L2 LINE L2 -495 2819 2719 295 308 105 15 chr5 194828808 194828941 -8256591 + L2 LINE L2 2566 2710 -604 356 210 25 0 chr5 194828943 194829024 -8256508 + MLT1K LTR MaLR 154 236 -352 359 316 0 0 chr5 194829029 194829146 -8256386 - MIR SINE MIR 0 262 146 2327 68 3 10 chr5 194830051 194830358 -8255174 - AluY SINE Alu -6 305 1 1990 120 57 27 chr5 194830416 194830749 -8254783 + THE1B LTR MaLR 1 343 -21 1302 160 4 23 chr5 194830818 194831080 -8254452 + L1MB3 LINE L1 5925 6181 -2 371 273 38 82 chr5 194831100 194831126 -8254406 - L1ME4a LINE L1 -4 6117 6091 1251 174 89 51 chr5 194831126 194831419 -8254113 + AluJo SINE Alu 1 304 -8 371 273 38 82 chr5 194831419 194831575 -8253957 - L1ME4a LINE L1 -30 6091 5943 2168 100 0 0 chr5 194831656 194831946 -8253586 + AluSg1 SINE Alu 5 294 -15 304 258 258 0 chr5 194834014 194834107 -8251425 - MIR3 SINE MIR -48 160 44 472 296 58 38 chr5 194834135 194834426 -8251106 - L2 LINE L2 0 3313 3017 197 298 57 71 chr5 194834854 194834995 -8250537 + MIR SINE MIR 13 153 -55 396 154 87 90 chr5 194835006 194835154 -8250378 - MIR SINE MIR -44 218 78 1904 237 22 44 chr5 194835627 194836130 -8249402 - MER115 DNA AcHobo -25 668 177 2390 119 53 58 chr5 194836219 194836312 -8249220 - Tigger2a DNA MER2_type -2275 433 341 1481 161 7 29 chr5 194836312 194836586 -8248946 + AluJb SINE Alu 44 311 -1 2390 119 53 58 chr5 194836586 194836927 -8248605 - Tigger2a DNA MER2_type -2367 341 1 22 0 0 0 chr5 194836943 194836965 -8248567 + AT_rich Low_complexity Low_complexity 1 22 0 1061 144 17 6 chr5 194836965 194837145 -8248387 + AluJb SINE Alu 2 183 -129 766 95 0 115 chr5 194837245 194837393 -8248139 - Tigger2a DNA MER2_type -303 131 1 22 0 0 0 chr5 194837409 194837431 -8248101 + AT_rich Low_complexity Low_complexity 1 22 0 1899 132 3 16 chr5 194837431 194837735 -8247797 + AluSx SINE Alu 2 301 -11 484 107 36 12 chr5 194837736 194837820 -8247712 - Charlie5 DNA MER1_type -73 2539 2454 1788 141 13 23 chr5 194837872 194838009 -8247523 + AluSx SINE Alu 1 138 -174 2196 86 3 0 chr5 194838009 194838301 -8247231 + AluSp SINE Alu 1 293 -20 1788 141 13 23 chr5 194838301 194838468 -8247064 + AluSx SINE Alu 138 302 -10 834 192 48 0 chr5 194838469 194838636 -8246896 - L1MB7 LINE L1 -38 6146 5972 576 240 15 0 chr5 194838639 194838782 -8246750 - MER33 DNA MER1_type -250 74 1 238 290 0 0 chr5 194839823 194839885 -8245647 - MLT1L LTR MaLR -3 612 551 831 219 6 44 chr5 194839888 194839906 -8245626 + MER5A DNA MER1_type 8 25 -164 1663 155 10 34 chr5 194839906 194840220 -8245312 + AluJo SINE Alu 2 308 0 831 219 6 44 chr5 194840220 194840383 -8245149 + MER5A DNA MER1_type 25 183 -6 698 296 71 66 chr5 194840460 194840883 -8244649 - MLT1L LTR MaLR -190 425 1 272 252 213 11 chr5 194840883 194841003 -8244529 - MIR SINE MIR -62 146 16 651 301 31 74 chr5 194841133 194841458 -8244074 + MER102a DNA MER1_type 2 312 -18 2342 158 46 10 chr5 194842019 194842267 -8243265 - MSTB LTR MaLR 0 426 156 1489 177 17 7 chr5 194842267 194842555 -8242977 + AluJb SINE Alu 16 306 -6 2342 158 46 10 chr5 194842555 194842717 -8242815 - MSTB LTR MaLR -270 156 1 426 300 207 5 chr5 194842999 194843309 -8242223 - L2 LINE L2 -182 3090 2712 355 341 194 0 chr5 194843387 194843686 -8241846 + L2 LINE L2 2383 2739 -575 240 239 109 11 chr5 194843715 194843807 -8241725 - LTR67 LTR ERVL 0 557 457 1068 293 159 11 chr5 194843862 194844316 -8241216 - MLT1G1 LTR MaLR 0 595 75 201 213 93 80 chr5 194844348 194844423 -8241109 + L2 LINE L2 3235 3310 -3 180 77 0 0 chr5 194844423 194844449 -8241083 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1588 120 4 73 chr5 194844457 194844732 -8240800 - AluSq SINE Alu -57 256 1 338 199 73 132 chr5 194844854 194844990 -8240542 + MIR SINE MIR 63 190 -72 185 132 26 0 chr5 194845824 194845862 -8239670 + GA-rich Low_complexity Low_complexity 3 41 0 1970 195 33 22 chr5 194846446 194846898 -8238634 + MLT1C LTR MaLR 1 457 -10 293 256 37 112 chr5 194847243 194847322 -8238210 - LTR33 LTR ERVL 0 521 438 995 155 0 46 chr5 194847322 194847496 -8238036 + FRAM SINE Alu 1 166 0 293 256 37 112 chr5 194847496 194847631 -8237901 - LTR33 LTR ERVL -83 438 323 288 188 14 29 chr5 194847723 194847792 -8237740 - LTR33 LTR ERVL -348 173 106 1767 177 6 6 chr5 194848788 194849099 -8236433 - AluJo SINE Alu -1 311 1 604 204 41 27 chr5 194849330 194849477 -8236055 + MER104 DNA Tc2 30 178 -2 1244 88 0 6 chr5 194849591 194849772 -8235760 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1767 107 107 0 chr5 194849788 194850059 -8235473 - AluSq SINE Alu -13 300 1 266 254 136 9 chr5 194850256 194850366 -8235166 + MLT1L LTR MaLR 157 280 -335 336 256 201 26 chr5 194850404 194850638 -8234894 + MLT1L LTR MaLR 338 612 -3 433 242 24 8 chr5 194850849 194850973 -8234559 + L2 LINE L2 3182 3307 -6 928 170 6 12 chr5 194851171 194851336 -8234196 - AluJo SINE Alu -114 198 35 207 240 96 48 chr5 194851564 194851668 -8233864 - MIR SINE MIR -80 128 20 705 123 0 0 chr5 194851745 194851851 -8233681 - FLAM_C SINE Alu -36 107 2 378 0 0 0 chr5 194851964 194852006 -8233526 + (TG)n Simple_repeat Simple_repeat 2 43 0 1764 78 0 0 chr5 194852471 194852688 -8232844 - AluSc SINE Alu -7 302 86 268 319 74 7 chr5 194852819 194852954 -8232578 + MIR SINE MIR 47 190 -72 467 192 24 26 chr5 194854199 194854357 -8231175 - MIR SINE MIR -62 146 33 424 336 102 41 chr5 194854476 194855060 -8230472 - L2 LINE L2 0 3313 2766 315 0 0 0 chr5 194855060 194855095 -8230437 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 333 0 0 0 chr5 194855094 194855131 -8230401 + (TG)n Simple_repeat Simple_repeat 2 38 0 424 336 102 41 chr5 194855095 194855438 -8230094 - L2 LINE L2 -547 2766 2359 604 255 81 25 chr5 194855824 194856059 -8229473 - MIR SINE MIR -2 260 13 204 346 8 39 chr5 194856255 194856385 -8229147 - MIR SINE MIR -65 143 18 327 220 20 20 chr5 194856871 194856971 -8228561 + MIR SINE MIR 75 174 -88 273 293 12 110 chr5 194857466 194857586 -8227946 + MIR SINE MIR 37 138 -124 2122 115 17 0 chr5 194857586 194857882 -8227650 + AluSx SINE Alu 1 301 -11 273 293 12 110 chr5 194857882 194857925 -8227607 + MIR SINE MIR 138 184 -78 428 197 52 27 chr5 194858534 194858686 -8226846 + MIR SINE MIR 100 257 -5 231 314 114 19 chr5 194858721 194858826 -8226706 - L2 LINE L2 -8 3305 3191 766 252 78 9 chr5 194859252 194859713 -8225819 + LTR33 LTR ERVL 8 520 -1 504 231 21 28 chr5 194860298 194860441 -8225091 + MIR SINE MIR 71 212 -50 543 264 53 18 chr5 194860735 194860962 -8224570 - MIR SINE MIR -16 246 12 213 154 0 0 chr5 194861171 194861210 -8224322 + A-rich Low_complexity Low_complexity 1 39 0 252 326 0 12 chr5 194862078 194862164 -8223368 + L2 LINE L2 3221 3305 -8 382 298 147 5 chr5 194862621 194862812 -8222720 + MIR SINE MIR 32 249 -13 575 260 24 12 chr5 194863922 194864091 -8221441 - MIR SINE MIR -57 205 35 2287 113 10 7 chr5 194864854 194865164 -8220368 + AluSx SINE Alu 1 311 -1 189 308 92 15 chr5 194865349 194865479 -8220053 - L2 LINE L2 -217 3055 2916 462 18 0 0 chr5 194867389 194867444 -8218088 + (CA)n Simple_repeat Simple_repeat 1 55 0 285 220 93 67 chr5 194868115 194868265 -8217267 - L1ME4a LINE L1 0 6121 5968 876 287 58 11 chr5 194868621 194868980 -8216552 - L1ME4a LINE L1 -203 5918 5543 251 276 151 25 chr5 194869261 194869573 -8215959 - L1MC4a LINE L1 -484 5637 5574 2447 101 0 0 chr5 194869574 194869882 -8215650 + AluSx SINE Alu 1 308 -4 223 289 16 41 chr5 194870159 194870280 -8215252 + L2 LINE L2 2978 3095 -177 347 179 90 60 chr5 194870834 194870968 -8214564 + L1ME4a LINE L1 5962 6099 -22 1986 147 7 10 chr5 194870970 194871277 -8214255 - AluJb SINE Alu -6 306 1 271 376 11 0 chr5 194871434 194871527 -8214005 - L2 LINE L2 -43 3229 3136 1783 262 102 64 chr5 194871599 194871699 -8213833 - MER115 DNA AcHobo -10 683 588 2300 96 7 0 chr5 194871699 194871991 -8213541 - AluSp SINE Alu -19 294 1 1783 262 102 64 chr5 194871991 194872535 -8212997 - MER115 DNA AcHobo -105 588 14 807 280 45 26 chr5 194872550 194872814 -8212718 - Charlie8 DNA MER1_type -2147 270 2 208 303 15 0 chr5 194873212 194873278 -8212254 + L2 LINE L2 3194 3260 -12 624 301 32 36 chr5 194873345 194873594 -8211938 - MIR SINE MIR 0 262 15 348 251 35 54 chr5 194873732 194873935 -8211597 - MER113 DNA MER1_type? -322 199 1 234 0 0 0 chr5 194874560 194874586 -8210946 + (TG)n Simple_repeat Simple_repeat 1 26 0 331 248 74 25 chr5 194875015 194875136 -8210396 - L2 LINE L2 0 3272 3146 263 205 71 45 chr5 194875306 194875418 -8210114 + MLT1L LTR MaLR 1 115 -500 694 257 23 36 chr5 194875914 194876086 -8209446 - MER113 DNA MER1_type? 0 521 348 1770 153 3 30 chr5 194876086 194876386 -8209146 + AluJb SINE Alu 11 302 -10 694 257 23 36 chr5 194876386 194876658 -8208874 - MER113 DNA MER1_type? -173 348 3 253 320 110 34 chr5 194876795 194877086 -8208446 - L2 LINE L2 -703 2611 2299 652 196 159 0 chr5 194877087 194877250 -8208282 + MER5A DNA MER1_type 1 189 0 282 218 64 39 chr5 194877301 194877379 -8208153 + MIR3 SINE MIR 89 168 -40 1589 281 41 14 chr5 194877415 194877857 -8207675 + MLT1J LTR MaLR 23 476 -35 253 301 36 0 chr5 194877925 194878008 -8207524 + MER5A DNA MER1_type 96 181 -8 25 0 0 0 chr5 194879058 194879083 -8206449 + AT_rich Low_complexity Low_complexity 1 25 0 219 314 105 9 chr5 194879416 194879521 -8206011 - MER91C DNA MER1_type -25 115 1 23 0 0 0 chr5 194879865 194879888 -8205644 + AT_rich Low_complexity Low_complexity 1 23 0 198 103 0 0 chr5 194880157 194880186 -8205346 + (A)n Simple_repeat Simple_repeat 1 29 0 1824 114 99 40 chr5 194880482 194880834 -8204698 + THE1C LTR MaLR 1 373 -2 466 272 110 7 chr5 194880851 194881045 -8204487 - MIR SINE MIR -51 211 2 372 282 34 43 chr5 194881109 194881226 -8204306 - L2 LINE L2 0 3272 3157 246 128 0 0 chr5 194883215 194883254 -8202278 + (CGG)n Simple_repeat Simple_repeat 2 40 0 185 154 26 0 chr5 194883254 194883293 -8202239 + GA-rich Low_complexity Low_complexity 3 42 0 30 27 0 0 chr5 194883959 194883996 -8201536 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr5 194885990 194886020 -8199512 + AT_rich Low_complexity Low_complexity 1 30 0 447 231 26 26 chr5 194886646 194886763 -8198769 - MIR SINE MIR -73 189 73 207 0 0 0 chr5 194887082 194887105 -8198427 + (T)n Simple_repeat Simple_repeat 1 23 0 306 0 0 0 chr5 194887813 194887847 -8197685 + (TG)n Simple_repeat Simple_repeat 1 34 0 814 115 0 9 chr5 194888155 194888268 -8197264 + FLAM_A SINE Alu 13 124 -18 1999 127 45 7 chr5 194888798 194889090 -8196442 - AluJb SINE Alu -9 303 1 2321 103 0 0 chr5 194889147 194889448 -8196084 + AluSx SINE Alu 1 301 -11 390 233 11 0 chr5 194889464 194889554 -8195978 - MIR SINE MIR -44 218 128 187 158 26 26 chr5 194889818 194889856 -8195676 - L2 LINE L2 -25 3247 3210 21 36 0 0 chr5 194891167 194891195 -8194337 + AT_rich Low_complexity Low_complexity 1 28 0 940 120 0 8 chr5 194891586 194891719 -8193813 + AluJb SINE Alu 1 132 -180 21 0 0 0 chr5 194892813 194892834 -8192698 + AT_rich Low_complexity Low_complexity 1 21 0 294 319 43 0 chr5 194893041 194893135 -8192397 + MIR SINE MIR 47 144 -64 267 260 164 27 chr5 194893116 194893213 -8192319 - MER5B DNA MER1_type -6 172 90 * 2145 43 31 0 chr5 194893213 194893467 -8192065 - AluY SINE Alu -14 297 36 267 260 164 27 chr5 194893467 194893515 -8192017 - MER5B DNA MER1_type -88 90 7 198 0 0 0 chr5 194893622 194893644 -8191888 + (T)n Simple_repeat Simple_repeat 1 22 0 330 45 0 0 chr5 194893698 194893742 -8191790 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 185 288 38 12 chr5 194894134 194894214 -8191318 + MIR SINE MIR 67 148 -60 729 174 66 19 chr5 194894236 194894416 -8191116 + L1MD2 LINE L1 6169 7959 -36 664 146 16 32 chr5 194894416 194894539 -8190993 + FLAM_C SINE Alu 23 143 0 38 0 0 0 chr5 194894553 194894591 -8190941 + AT_rich Low_complexity Low_complexity 1 38 0 1523 157 84 28 chr5 194894596 194894882 -8190650 + AluJb SINE Alu 1 302 -10 1967 145 45 3 chr5 194895139 194895428 -8190104 - AluJb SINE Alu -11 301 1 2379 96 0 0 chr5 194895485 194895786 -8189746 + AluSx SINE Alu 1 301 -11 433 233 11 0 chr5 194895802 194895892 -8189640 - MIR SINE MIR -44 218 128 226 184 0 0 chr5 194896156 194896194 -8189338 - L2 LINE L2 -25 3247 3210 239 256 66 91 chr5 194896194 194896276 -8189256 - MIR SINE MIR -18 243 127 21 36 0 0 chr5 194897505 194897533 -8187999 + AT_rich Low_complexity Low_complexity 1 28 0 918 120 0 8 chr5 194897924 194898057 -8187475 + AluJb SINE Alu 1 132 -180 182 195 0 24 chr5 194898583 194898624 -8186908 - L2 LINE L2 -1 3312 3273 21 36 0 0 chr5 194898915 194898943 -8186589 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 194899312 194899348 -8186184 + AT_rich Low_complexity Low_complexity 1 36 0 376 245 51 10 chr5 194899546 194899644 -8185888 + MIR SINE MIR 34 135 -73 1868 135 43 3 chr5 194899830 194900112 -8185420 - AluSx SINE Alu -19 293 1 22 0 0 0 chr5 194900117 194900139 -8185393 + AT_rich Low_complexity Low_complexity 1 22 0 846 227 9 18 chr5 194900283 194900503 -8185029 - L1MC5 LINE L1 -35 7926 7709 2234 92 7 0 chr5 194901270 194901564 -8183968 + AluSp SINE Alu 1 296 -17 284 330 69 23 chr5 194901927 194902100 -8183432 - MIR SINE MIR -10 252 72 415 203 145 51 chr5 194902767 194902905 -8182627 + MIR SINE MIR 56 206 -56 709 206 133 0 chr5 194904598 194904763 -8180769 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr5 194905152 194905173 -8180359 + AT_rich Low_complexity Low_complexity 1 21 0 552 274 63 32 chr5 194905260 194905450 -8180082 + MIR SINE MIR 10 205 -57 195 94 94 0 chr5 194905696 194905728 -8179804 - L2 LINE L2 -16 3297 3263 443 291 57 48 chr5 194905853 194905971 -8179561 + MIR SINE MIR 37 161 -101 907 191 0 0 chr5 194905971 194906153 -8179379 + FRAM SINE Alu 1 46 0 443 291 57 48 chr5 194906153 194906242 -8179290 + MIR SINE MIR 161 248 -14 1998 87 62 7 chr5 194906474 194906750 -8178782 - AluSg SINE Alu -19 291 1 251 285 116 29 chr5 194906966 194907138 -8178394 - MIR3 SINE MIR -6 202 16 228 271 84 28 chr5 194907733 194907840 -8177692 - MER117 DNA MER1_type -84 113 1 2258 89 0 0 chr5 194908119 194908428 -8177104 + AluSc SINE Alu 2 310 0 242 281 85 12 chr5 194908783 194908865 -8176667 - L2 LINE L2 0 3272 3185 285 264 121 22 chr5 194909015 194909106 -8176426 - L2 LINE L2 -50 3222 3123 22 0 0 0 chr5 194909804 194909826 -8175706 + AT_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr5 194910379 194910408 -8175124 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr5 194910810 194910845 -8174687 + AT_rich Low_complexity Low_complexity 1 35 0 2072 119 10 3 chr5 194910848 194911141 -8174391 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr5 194912004 194912025 -8173507 + AT_rich Low_complexity Low_complexity 1 21 0 335 319 43 0 chr5 194912231 194912325 -8173207 + MIR SINE MIR 47 144 -64 290 246 183 32 chr5 194912327 194912404 -8173128 - MER5B DNA MER1_type -27 151 87 2074 47 32 0 chr5 194912404 194912657 -8172875 - AluY SINE Alu -15 296 36 290 246 183 32 chr5 194912657 194912705 -8172827 - MER5B DNA MER1_type -91 87 7 207 0 0 0 chr5 194912812 194912835 -8172697 + (T)n Simple_repeat Simple_repeat 1 23 0 294 50 0 0 chr5 194912889 194912929 -8172603 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 214 288 38 12 chr5 194913321 194913401 -8172131 + MIR SINE MIR 67 148 -60 713 164 55 14 chr5 194913457 194913603 -8171929 + L1MD2 LINE L1 6169 6320 -39 655 146 16 32 chr5 194913603 194913726 -8171806 + FLAM_C SINE Alu 23 143 0 38 0 0 0 chr5 194913740 194913778 -8171754 + AT_rich Low_complexity Low_complexity 1 38 0 1485 161 84 28 chr5 194913783 194914069 -8171463 + AluJb SINE Alu 1 302 -10 2115 114 13 3 chr5 194914326 194914624 -8170908 - AluSx SINE Alu -11 301 1 382 288 68 51 chr5 194915196 194915488 -8170044 + L2 LINE L2 3017 3313 0 277 269 258 0 chr5 194915516 194915609 -8169923 + MIR3 SINE MIR 44 160 -48 466 212 37 32 chr5 194916430 194916619 -8168913 - AluY SINE Alu -17 294 105 2071 125 0 10 chr5 194917504 194917809 -8167723 + AluSx SINE Alu 1 302 -10 22 56 0 0 chr5 194917905 194917941 -8167591 + AT_rich Low_complexity Low_complexity 1 36 0 2154 100 27 0 chr5 194920482 194920781 -8164751 + AluSq SINE Alu 1 307 -6 392 246 132 0 chr5 194923602 194923716 -8161816 + MIR3 SINE MIR 40 168 -40 181 320 32 96 chr5 194925017 194925142 -8160390 - MIR SINE MIR -62 146 30 1918 176 0 0 chr5 194925249 194925561 -8159971 - AluJb SINE Alu 0 312 1 402 256 43 26 chr5 194925857 194925974 -8159558 - L2 LINE L2 -3 3310 3192 284 331 119 26 chr5 194927604 194927755 -8157777 - MIR SINE MIR -14 248 84 25 0 0 0 chr5 194928526 194928551 -8156981 + AT_rich Low_complexity Low_complexity 1 25 0 2133 106 3 10 chr5 194929897 194930199 -8155333 + AluSx SINE Alu 1 300 -12 2099 113 3 3 chr5 194930526 194930817 -8154715 + AluSg SINE Alu 1 291 -19 3625 123 24 29 chr5 194930840 194931499 -8154033 + L1MC1 LINE L1 5661 6316 -17 226 295 0 0 chr5 194931507 194931585 -8153947 + (TA)n Simple_repeat Simple_repeat 1 78 0 1625 172 18 11 chr5 194932446 194932731 -8152801 + AluJb SINE Alu 1 287 -25 2116 117 7 10 chr5 194933085 194933384 -8152148 - AluSq SINE Alu -15 298 1 2413 72 0 10 chr5 194933735 194934039 -8151493 + AluY SINE Alu 1 301 -10 221 281 18 0 chr5 194936768 194936825 -8148707 + MIR SINE MIR 75 132 -130 1698 179 0 7 chr5 194936947 194937226 -8148306 + AluJb SINE Alu 20 296 -16 359 195 104 0 chr5 194938065 194938142 -8147390 + MIR SINE MIR 153 237 -25 2097 118 54 57 chr5 194939181 194939570 -8145962 - MLT1B LTR MaLR -2 388 1 2044 118 3 60 chr5 194940039 194940370 -8145162 - AluSx SINE Alu 0 312 1 2039 142 0 0 chr5 194941244 194941553 -8143979 - AluSx SINE Alu 0 309 1 829 164 7 0 chr5 194942033 194942173 -8143359 + FLAM_C SINE Alu 1 141 -2 312 27 0 0 chr5 194942364 194942401 -8143131 + (CATA)n Simple_repeat Simple_repeat 2 38 0 30 0 0 0 chr5 194942505 194942535 -8142997 + AT_rich Low_complexity Low_complexity 1 30 0 1495 151 76 34 chr5 194942857 194943148 -8142384 + AluSx SINE Alu 1 303 -9 318 186 151 12 chr5 194943601 194943687 -8141845 + L1ME3A LINE L1 6059 6156 -14 1720 139 18 18 chr5 194944640 194944913 -8140619 + AluSx SINE Alu 23 295 -17 1166 154 0 0 chr5 194947353 194947522 -8138010 + FRAM SINE Alu 1 166 -10 601 285 108 16 chr5 194948635 194948884 -8136648 - L2 LINE L2 -72 3241 2970 2803 237 143 64 chr5 194950547 194951418 -8134114 + L1MC4 LINE L1 6461 7262 -780 625 209 76 0 chr5 194951418 194951523 -8134009 + FLAM_A SINE Alu 2 114 -19 2803 237 143 64 chr5 194951523 194951655 -8133877 + L1MC4 LINE L1 7262 7382 -660 2273 169 19 6 chr5 194951655 194952015 -8133517 - MLT1A1 LTR MaLR 0 365 1 2803 237 143 64 chr5 194952015 194952477 -8133055 + L1MC4 LINE L1 7382 8042 0 2129 114 4 0 chr5 194953350 194953665 -8131867 + AluSx SINE Alu 1 316 0 430 305 55 16 chr5 194954513 194954641 -8130891 + MIR SINE MIR 20 152 -110 326 286 150 7 chr5 194955251 194955398 -8130134 + MIR SINE MIR 67 234 -28 251 193 0 53 chr5 194956360 194956417 -8129115 + MER5C DNA MER1_type 1 54 -270 1910 158 0 14 chr5 194956859 194957156 -8128376 - AluSx SINE Alu -19 293 1 445 183 0 65 chr5 194957403 194957496 -8128036 - AluJ/FRAM SINE Alu -5 307 221 29 70 0 0 chr5 194958954 194959011 -8126521 + AT_rich Low_complexity Low_complexity 1 57 0 204 216 0 0 chr5 194959073 194959124 -8126408 + T-rich Low_complexity Low_complexity 1 51 0 38 22 0 0 chr5 194960903 194960948 -8124584 + AT_rich Low_complexity Low_complexity 1 45 0 38 39 0 0 chr5 194962293 194962345 -8123187 + AT_rich Low_complexity Low_complexity 1 52 0 242 224 20 0 chr5 194964506 194964555 -8120977 - MER103 DNA DNA -65 101 52 2225 87 3 14 chr5 194964556 194964887 -8120645 - AluSp SINE Alu 0 328 1 2748 177 38 70 chr5 194966196 194966828 -8118704 + LTR9 LTR ERV1 1 612 0 258 0 0 67 chr5 194966917 194966962 -8118570 + (GGGTG)n Simple_repeat Simple_repeat 4 45 0 1342 145 72 38 chr5 194967383 194967493 -8118039 + AluJb SINE Alu 5 110 -202 219 36 0 0 chr5 194967493 194967521 -8118011 + (CAA)n Simple_repeat Simple_repeat 1 28 0 1342 145 72 38 chr5 194967521 194967672 -8117860 + AluJb SINE Alu 110 275 -37 764 155 47 31 chr5 194967735 194967864 -8117668 + FLAM_C SINE Alu 1 131 -2 2297 92 0 0 chr5 194968352 194968636 -8116896 + AluSg SINE Alu 1 284 -26 358 243 249 44 chr5 194968640 194968821 -8116711 - MIR SINE MIR 0 262 45 1105 188 5 0 chr5 194969086 194969297 -8116235 - AluJo SINE Alu 0 308 97 202 242 0 16 chr5 194969298 194969360 -8116172 + (TA)n Simple_repeat Simple_repeat 2 62 0 228 319 0 0 chr5 194970049 194970121 -8115411 + GA-rich Low_complexity Low_complexity 1 72 0 242 280 97 43 chr5 194970362 194970455 -8115077 + L2 LINE L2 3159 3256 -16 318 350 39 10 chr5 194971118 194971324 -8114208 + MIR SINE MIR 1 212 -50 304 263 38 0 chr5 194971970 194972050 -8113482 + L2 LINE L2 3188 3270 -2 223 243 291 10 chr5 194972242 194972345 -8113187 - MER5A DNA MER1_type -32 157 26 274 271 144 17 chr5 194972610 194972728 -8112804 - L2 LINE L2 -2 3311 3179 384 22 0 0 chr5 194972751 194972796 -8112736 + (TG)n Simple_repeat Simple_repeat 2 46 0 851 295 143 24 chr5 194973018 194973693 -8111839 - L2 LINE L2 -2 3311 2560 2312 89 0 3 chr5 194974643 194974946 -8110586 - AluSx SINE Alu -10 302 1 403 319 30 6 chr5 194975833 194976002 -8109530 + MIR SINE MIR 2 174 -88 198 0 0 0 chr5 194976528 194976550 -8108982 + (TGG)n Simple_repeat Simple_repeat 1 22 0 40 0 0 0 chr5 194977032 194977072 -8108460 + AT_rich Low_complexity Low_complexity 1 40 0 3804 87 15 81 chr5 194977636 194978036 -8107496 - L1PB1 LINE L1 -3 6864 6516 339 25 0 0 chr5 194978036 194978076 -8107456 + (TA)n Simple_repeat Simple_repeat 2 41 0 3804 87 15 81 chr5 194978076 194978282 -8107250 - L1PB1 LINE L1 -351 6516 6298 645 21 0 97 chr5 194978282 194978374 -8107158 + L1PA4 LINE L1 6069 6152 -3 18496 147 44 15 chr5 194978379 194980531 -8105001 - L1PB1 LINE L1 -559 6308 4220 2027 130 7 7 chr5 194980531 194980832 -8104700 - AluSx SINE Alu -11 301 1 18496 147 44 15 chr5 194980832 194984802 -8100730 - L1PB1 LINE L1 -2647 4220 3 1061 297 39 20 chr5 194984916 194984963 -8100569 + L1MEc LINE L1 1021 1066 -5330 1431 167 76 4 chr5 194984963 194985247 -8100285 + AluJo SINE Alu 1 303 0 1061 297 39 20 chr5 194985247 194985788 -8099744 + L1MEc LINE L1 1066 1621 -4775 1008 228 42 0 chr5 194986000 194986241 -8099291 + L1M3f LINE L1 14 264 -5064 711 85 0 0 chr5 194986348 194986442 -8099090 + L1PBa LINE L1 1 94 -6769 552 203 163 0 chr5 194986445 194986568 -8098964 + L1M3f LINE L1 285 427 -4901 2042 177 53 14 chr5 194986578 194986996 -8098536 + L1M3f LINE L1 494 927 -4401 1070 193 16 54 chr5 194986997 194987115 -8098417 + MLT2D LTR ERVL 74 195 -219 2919 103 3 11 chr5 194987115 194987493 -8098039 - THE1C LTR MaLR 0 375 1 1070 193 16 54 chr5 194987493 194987681 -8097851 + MLT2D LTR ERVL 195 414 0 955 249 83 10 chr5 194987682 194987995 -8097537 + L1ME LINE L1 5454 5789 -381 2146 226 24 20 chr5 194988028 194988527 -8097005 - LTR31 LTR ERV1 -15 604 104 1831 119 4 0 chr5 194988611 194988872 -8096660 - AluSx SINE Alu -3 309 48 2071 87 0 4 chr5 194989009 194989273 -8096259 + AluY SINE Alu 3 265 -46 21492 43 49 8 chr5 194989374 194989616 -8095916 - L1P LINE L1 -3315 2831 2600 2911 13 0 0 chr5 194989616 194989930 -8095602 - AluYb8 SINE Alu -4 314 1 21492 43 49 8 chr5 194989930 194992407 -8093125 - L1P LINE L1 -3546 2600 1 304 342 191 2 chr5 194992680 194993078 -8092454 - L2 LINE L2 -5 3308 2836 423 72 31 41 chr5 194993085 194993182 -8092350 + (GGAGAA)n Simple_repeat Simple_repeat 5 100 0 464 308 118 5 chr5 194993189 194993384 -8092148 - L2 LINE L2 -448 2866 2650 21 0 0 0 chr5 194993435 194993456 -8092076 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 194993750 194993771 -8091761 + AT_rich Low_complexity Low_complexity 1 21 0 2081 153 0 0 chr5 194993845 194994152 -8091380 + AluSx SINE Alu 6 312 0 585 228 52 21 chr5 194994259 194994452 -8091080 - L1ME4a LINE L1 -187 5934 5736 806 282 73 34 chr5 194994781 194994996 -8090536 - L2 LINE L2 -729 2585 2380 1262 218 132 15 chr5 194994996 194995322 -8090210 - MLT1A1 LTR MaLR -1 364 1 806 282 73 34 chr5 194995322 194995542 -8089990 - L2 LINE L2 -934 2380 2133 738 271 67 28 chr5 194995567 194995932 -8089600 + LTR16A LTR ERVL 27 449 -1 764 178 7 22 chr5 194997163 194997298 -8088234 - FLAM_A SINE Alu 0 133 1 31 26 0 0 chr5 194998129 194998167 -8087365 + AT_rich Low_complexity Low_complexity 1 38 0 667 265 77 23 chr5 194998233 194998479 -8087053 - MIR SINE MIR 0 262 6 393 297 142 60 chr5 194998776 194999398 -8086134 + L1M4 LINE L1 2548 3220 -2926 822 263 61 8 chr5 194999412 194999659 -8085873 - MIR SINE MIR 0 262 3 245 228 63 0 chr5 195000180 195000259 -8085273 + L1ME LINE L1 481 564 -5966 4644 158 49 28 chr5 195000259 195001144 -8084388 + L1MC2 LINE L1 5433 6335 -9 699 257 103 77 chr5 195002020 195002705 -8082827 + L1ME LINE L1 1293 2042 -4679 2150 127 7 0 chr5 195002705 195003004 -8082528 - AluSx SINE Alu -11 301 1 699 257 103 77 chr5 195003004 195003106 -8082426 + L1ME LINE L1 2042 2140 -4581 25 31 0 0 chr5 195003107 195003139 -8082393 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 195003151 195003180 -8082352 + AT_rich Low_complexity Low_complexity 1 29 0 2083 274 40 17 chr5 195003362 195004192 -8081340 + L1ME LINE L1 2459 3272 -3268 22342 161 22 18 chr5 195004216 195009127 -8076405 - L1P3 LINE L1 -1454 5007 1 6331 218 95 82 chr5 195009280 195010588 -8074944 - L1MDa LINE L1 -743 5797 4508 900 158 0 7 chr5 195010588 195010727 -8074805 - AluJo SINE Alu -174 138 1 6331 218 95 82 chr5 195010727 195011435 -8074097 - L1MDa LINE L1 -2032 4508 3811 1813 183 0 3 chr5 195011435 195011725 -8073807 - AluJb SINE Alu -23 289 1 6331 218 95 82 chr5 195011725 195012323 -8073209 - L1MDa LINE L1 -2729 3811 3007 1062 175 9 69 chr5 195012331 195012548 -8072984 + MER20 DNA MER1_type 1 204 -15 1215 194 45 16 chr5 195012548 195012857 -8072675 - L1MDa LINE L1 -3555 2985 2668 1208 204 129 22 chr5 195013496 195014008 -8071524 - L1MDa LINE L1 -3859 2681 2118 810 185 0 49 chr5 195014008 195014170 -8071362 + FRAM SINE Alu 1 154 -22 344 153 0 0 chr5 195014233 195014292 -8071240 + L1MA6 LINE L1 6081 6139 -161 1100 166 64 57 chr5 195014469 195014544 -8070988 - L1MA6 LINE L1 0 6300 6227 2193 137 0 0 chr5 195014544 195014851 -8070681 - AluSx SINE Alu -5 307 1 1100 166 64 57 chr5 195014851 195015058 -8070474 - L1MA6 LINE L1 -73 6227 6016 206 233 23 0 chr5 195015080 195015123 -8070409 - L2 LINE L2 -60 3212 3169 282 312 32 0 chr5 195015174 195015267 -8070265 + MIR SINE MIR 84 179 -83 2697 29 0 0 chr5 195015526 195015855 -8069677 + L1PA5 LINE L1 5830 6158 0 904 155 60 0 chr5 195015857 195016025 -8069507 + L1MA8 LINE L1 5878 6055 -236 4542 138 23 25 chr5 195016027 195016783 -8068749 - L1MA6 LINE L1 -226 6074 5321 2455 84 0 0 chr5 195016783 195017079 -8068453 - AluSg SINE Alu -14 296 1 4542 138 23 25 chr5 195017079 195017241 -8068291 - L1MA6 LINE L1 -979 5321 5160 326 262 36 0 chr5 195017672 195017756 -8067776 + MER94 DNA DNA 1 87 -47 244 365 31 25 chr5 195018015 195018174 -8067358 - MIR SINE MIR -70 192 33 264 342 13 7 chr5 195018318 195018467 -8067065 - MIR SINE MIR -21 241 92 209 293 21 86 chr5 195020632 195020772 -8064760 - L2 LINE L2 -208 3064 2934 766 253 6 6 chr5 195021387 195021565 -8063967 + MER5B DNA MER1_type 1 178 0 186 339 0 0 chr5 195021628 195021687 -8063845 - MIR SINE MIR -159 103 45 183 323 42 21 chr5 195022111 195022207 -8063325 + MIR SINE MIR 117 214 -48 2372 64 0 3 chr5 195022225 195022544 -8062988 + AluY SINE Alu 1 318 0 225 191 0 0 chr5 195022601 195022643 -8062889 + (CA)n Simple_repeat Simple_repeat 1 42 0 271 273 91 8 chr5 195022683 195022815 -8062717 - MIR SINE MIR -91 171 29 284 244 17 102 chr5 195023101 195023277 -8062255 + MIR SINE MIR 23 183 -79 365 339 27 3 chr5 195023593 195023770 -8061762 - MIR SINE MIR -63 145 17 222 333 17 52 chr5 195024184 195024249 -8061283 + L2 LINE L2 2832 2898 -374 1049 164 13 65 chr5 195024249 195024480 -8061052 + MER20 DNA MER1_type 1 219 0 222 333 17 52 chr5 195024480 195024645 -8060887 + L2 LINE L2 2898 3054 -218 528 225 38 85 chr5 195024674 195024690 -8060842 - L2 LINE L2 0 3313 3298 497 80 13 0 chr5 195024690 195024765 -8060767 + (TCCA)n Simple_repeat Simple_repeat 1 76 0 528 225 38 85 chr5 195024765 195025041 -8060491 - L2 LINE L2 -15 3298 3035 252 196 91 0 chr5 195025846 195025934 -8059598 - MIR SINE MIR -62 146 89 480 273 38 8 chr5 195026254 195026386 -8059146 + MIR SINE MIR 47 182 -80 1630 172 17 24 chr5 195027556 195027846 -8057686 - AluJo SINE Alu -24 288 1 521 291 87 19 chr5 195027989 195028195 -8057337 + MIR SINE MIR 43 262 0 2444 76 0 22 chr5 195028479 195028793 -8056739 + AluY SINE Alu 1 307 -4 431 301 40 29 chr5 195028908 195029081 -8056451 + MIR3 SINE MIR 20 194 -14 652 241 47 26 chr5 195029343 195029534 -8055998 + MIR SINE MIR 46 240 -22 289 286 9 132 chr5 195029582 195029809 -8055723 + MIR SINE MIR 47 245 -17 1039 157 0 0 chr5 195031448 195031595 -8053937 + AluSg/x SINE Alu 131 277 -33 186 71 0 0 chr5 195031598 195031626 -8053906 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 479 308 34 4 chr5 195031647 195031910 -8053622 - L2 LINE L2 -1121 2193 1923 945 205 124 19 chr5 195032326 195032585 -8052947 - L1ME3 LINE L1 -206 5956 5671 597 240 113 94 chr5 195032742 195033209 -8052323 - MLT1K LTR MaLR 0 476 1 25 0 0 0 chr5 195033535 195033560 -8051972 + AT_rich Low_complexity Low_complexity 1 25 0 1802 257 135 6 chr5 195033686 195034211 -8051321 - MLT1E LTR MaLR 0 593 1 212 180 0 20 chr5 195034288 195034338 -8051194 + (CATA)n Simple_repeat Simple_repeat 3 51 0 2246 108 0 3 chr5 195034774 195035070 -8050462 - AluSc SINE Alu -14 295 1 198 0 0 0 chr5 195035077 195035099 -8050433 + (T)n Simple_repeat Simple_repeat 1 22 0 678 260 12 0 chr5 195035273 195035442 -8050090 - MIR SINE MIR -44 218 48 406 242 209 7 chr5 195036142 195036295 -8049237 + MIR SINE MIR 78 261 -1 257 226 10 98 chr5 195036292 195036394 -8049138 - MIR SINE MIR -64 198 106 * 415 260 42 90 chr5 195036647 195036686 -8048846 + L1ME4a LINE L1 5670 5709 -412 458 38 25 25 chr5 195036686 195036765 -8048767 + (TTTTA)n Simple_repeat Simple_repeat 2 80 0 908 70 56 42 chr5 195036765 195036907 -8048625 - L1MA1 LINE L1 -10 6292 6149 415 260 42 90 chr5 195036907 195037266 -8048266 + L1ME4a LINE L1 5707 6050 -71 321 333 52 50 chr5 195038202 195038214 -8047318 - L2 LINE L2 -411 2903 2893 2488 70 0 0 chr5 195038214 195038512 -8047020 + AluY SINE Alu 1 298 -13 321 333 52 50 chr5 195038512 195038881 -8046651 - L2 LINE L2 -421 2893 2521 326 275 208 6 chr5 195038897 195039075 -8046457 + MIR SINE MIR 2 215 -47 267 318 65 35 chr5 195039539 195039709 -8045823 + L1ME LINE L1 5654 5828 -293 2341 12 0 0 chr5 195039936 195040187 -8045345 + AluYa5 SINE Alu 61 311 0 201 267 5 53 chr5 195041699 195041886 -8043646 + (ATGGTG)n Simple_repeat Simple_repeat 1 178 0 232 201 16 87 chr5 195042138 195042322 -8043210 + (ATGGTG)n Simple_repeat Simple_repeat 5 175 0 237 292 69 77 chr5 195042614 195042744 -8042788 + MIR SINE MIR 28 156 -106 1925 143 3 32 chr5 195043042 195043350 -8042182 - AluJb SINE Alu -9 303 5 657 227 60 16 chr5 195043428 195043613 -8041919 - MIR SINE MIR -56 206 14 215 224 0 20 chr5 195043653 195043702 -8041830 + CT-rich Low_complexity Low_complexity 3 50 0 183 269 51 13 chr5 195043745 195043823 -8041709 - L2 LINE L2 -60 3253 3173 1931 116 4 4 chr5 195044383 195044650 -8040882 + AluSc SINE Alu 10 276 -33 2019 141 3 3 chr5 195045869 195046152 -8039380 + AluJb SINE Alu 1 283 -29 216 0 0 0 chr5 195046152 195046176 -8039356 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 583 234 152 11 chr5 195047099 195047283 -8038249 - MER63A DNA MER1_type 0 210 1 270 276 19 0 chr5 195047336 195047445 -8038087 + MIR SINE MIR 84 148 -60 449 295 114 31 chr5 195048288 195048481 -8037051 - MIR SINE MIR -14 248 40 538 299 66 20 chr5 195049199 195049396 -8036136 + MIR SINE MIR 30 235 -27 207 256 0 0 chr5 195049591 195049634 -8035898 + GA-rich Low_complexity Low_complexity 1 43 0 331 193 0 5 chr5 195049758 195049847 -8035685 + MIR3 SINE MIR 37 170 -38 1179 184 5 0 chr5 195049857 195050047 -8035485 + MER20 DNA MER1_type 1 191 -28 310 328 114 28 chr5 195050416 195050815 -8034717 + L2 LINE L2 2630 3058 -214 1071 190 10 10 chr5 195051160 195051360 -8034172 - MER3 DNA MER1_type 0 209 10 347 41 20 0 chr5 195051430 195051479 -8034053 + (CA)n Simple_repeat Simple_repeat 2 51 0 510 266 64 130 chr5 195051508 195051738 -8033794 - L1MC4a LINE L1 -1889 5919 5675 2220 183 0 16 chr5 195051738 195052109 -8033423 + MLT1A1 LTR MaLR 1 365 0 510 266 64 130 chr5 195052109 195052413 -8033119 - L1MC4a LINE L1 -2133 5675 5423 2289 116 0 0 chr5 195052413 195052723 -8032809 - AluSg SINE Alu 0 310 1 510 266 64 130 chr5 195052723 195052762 -8032770 - L1MC4a LINE L1 -2385 5423 5383 313 321 57 27 chr5 195053071 195053370 -8032162 - L1MC4a LINE L1 -1094 5052 4745 194 62 31 0 chr5 195053454 195053486 -8032046 + (TA)n Simple_repeat Simple_repeat 1 33 0 498 136 0 0 chr5 195053635 195053716 -8031816 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 2123 133 10 3 chr5 195053721 195054029 -8031503 - AluSx SINE Alu -1 311 2 485 271 45 82 chr5 195054121 195054412 -8031120 - L1MC4a LINE L1 -1712 4434 4155 353 310 129 33 chr5 195054529 195054800 -8030732 - L1MC4a LINE L1 -2221 3925 3629 1913 105 8 0 chr5 195054827 195055085 -8030447 + AluY SINE Alu 52 311 0 195 299 254 8 chr5 195055736 195055870 -8029662 + MIR SINE MIR 63 229 -33 348 310 26 0 chr5 195055969 195056085 -8029447 + L2 LINE L2 2605 2723 -591 293 318 78 28 chr5 195056933 195057112 -8028420 - MIR SINE MIR -6 256 69 303 291 118 18 chr5 195057317 195057427 -8028105 + MIR SINE MIR 124 244 -18 327 300 0 0 chr5 195058443 195058533 -8026999 - MIR SINE MIR -70 138 49 239 261 170 48 chr5 195058988 195059153 -8026379 + MIR SINE MIR 70 254 -8 242 230 150 10 chr5 195059384 195059484 -8026048 + MIR SINE MIR 74 187 -75 531 249 72 53 chr5 195059525 195059734 -8025798 + MER102b DNA MER1_type 104 316 -25 515 309 19 19 chr5 195060489 195060651 -8024881 + MIR SINE MIR 25 186 -76 1720 168 0 26 chr5 195060665 195060969 -8024563 + AluJb SINE Alu 1 296 -16 360 276 52 31 chr5 195061362 195061508 -8024024 - MIR SINE MIR -33 175 23 863 155 26 7 chr5 195061863 195062018 -8023514 - AluJb SINE Alu -1 311 154 412 285 83 0 chr5 195062052 195062196 -8023336 + L1ME3A LINE L1 5988 6143 -27 247 239 99 0 chr5 195062226 195062297 -8023235 + MIR SINE MIR 66 143 -65 1488 175 40 53 chr5 195062322 195062625 -8022907 + AluSx SINE Alu 1 299 -13 2191 109 20 0 chr5 195062820 195063114 -8022418 + AluSx SINE Alu 1 300 -12 300 120 0 0 chr5 195064439 195064489 -8021043 + (CGGGG)n Simple_repeat Simple_repeat 2 51 0 253 215 51 0 chr5 195064849 195064928 -8020604 - L1M4 LINE L1 -1696 4450 4368 1442 149 58 41 chr5 195064968 195065263 -8020269 - AluJb SINE Alu -12 300 1 2169 123 0 10 chr5 195065271 195065580 -8019952 - AluSx SINE Alu -6 306 1 421 174 74 28 chr5 195065589 195065707 -8019825 - L1ME2 LINE L1 0 6334 6033 1065 189 101 57 chr5 195065719 195066060 -8019472 - L1MB8 LINE L1 -5 6173 5817 * 1824 304 60 45 chr5 195066044 195067109 -8018423 - L1M4 LINE L1 -1880 4266 3170 691 216 52 13 chr5 195067109 195067262 -8018270 + FRAM SINE Alu 1 159 -7 1824 304 60 45 chr5 195067262 195067725 -8017807 - L1M4 LINE L1 -2976 3170 2715 24 0 0 0 chr5 195067884 195067908 -8017624 + AT_rich Low_complexity Low_complexity 1 24 0 2316 92 3 10 chr5 195068203 195068507 -8017025 + AluSg SINE Alu 1 302 -8 4468 102 7 2 chr5 195068651 195069252 -8016280 - HSMAR1 DNA Mariner 0 1287 684 257 344 17 3 chr5 195069313 195069517 -8016015 - L2 LINE L2 -650 2664 2409 2194 116 3 0 chr5 195069654 195069955 -8015577 - AluSx SINE Alu -10 302 1 280 333 95 0 chr5 195070017 195070122 -8015410 - L2 LINE L2 0 3272 3158 892 256 58 8 chr5 195070267 195070509 -8015023 + MIR SINE MIR 1 254 -8 1503 222 124 0 chr5 195071403 195071813 -8013719 + MER113 DNA MER1_type? 1 461 -60 293 314 124 21 chr5 195072315 195072557 -8012975 - L2 LINE L2 -32 3240 2974 287 268 201 53 chr5 195073862 195074071 -8011461 - MIR SINE MIR -3 259 20 218 158 0 26 chr5 195076194 195076232 -8009300 + MIR SINE MIR 210 246 -16 * 253 159 0 23 chr5 195076201 195076245 -8009287 + L2 LINE L2 3261 3303 -10 213 211 0 0 chr5 195076311 195076349 -8009183 + CT-rich Low_complexity Low_complexity 1 38 0 1618 175 16 44 chr5 195076783 195077103 -8008429 - AluJo SINE Alu -1 311 1 1807 261 138 14 chr5 195077317 195078021 -8007511 - L1MC4 LINE L1 -1 8041 7251 707 267 122 35 chr5 195081642 195081897 -8003635 + LTR16B LTR ERVL 1 277 -187 1628 307 55 60 chr5 195081897 195082089 -8003443 + HERV16 LTR ERVL 2062 2253 -3232 246 62 0 0 chr5 195082089 195082121 -8003411 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1628 307 55 60 chr5 195082121 195082402 -8003130 + HERV16 LTR ERVL 2253 2534 -2951 2181 120 0 7 chr5 195082402 195082702 -8002830 - AluSx SINE Alu -14 298 1 1628 307 55 60 chr5 195082702 195083393 -8002139 + HERV16 LTR ERVL 2534 3304 -2181 2461 53 33 3 chr5 195083393 195083694 -8001838 + AluY SINE Alu 1 310 -1 1628 307 55 60 chr5 195083694 195083947 -8001585 + HERV16 LTR ERVL 3304 3557 -1928 617 125 0 0 chr5 195083986 195084066 -8001466 + AluSg/x SINE Alu 213 292 -17 2609 233 54 86 chr5 195084160 195085362 -8000170 - L1MEc LINE L1 -2968 3572 2481 2523 222 19 11 chr5 195085360 195085892 -7999640 - L1MEc LINE L1 -5989 551 16 * 692 176 17 85 chr5 195085890 195086018 -7999514 + L1ME LINE L1 4848 4962 -1184 * 1788 143 16 57 chr5 195086018 195086333 -7999199 - AluJb SINE Alu -10 302 1 692 176 17 85 chr5 195086333 195086380 -7999152 + L1ME LINE L1 4962 5011 -1135 4324 130 78 38 chr5 195086414 195087201 -7998331 + L1MD1 LINE L1 5411 6228 -14 1748 201 170 56 chr5 195087256 195087933 -7997599 - L1M4 LINE L1 -1278 4868 4115 227 149 0 21 chr5 195088107 195088154 -7997378 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 243 227 0 0 chr5 195088160 195088226 -7997306 + T-rich Low_complexity Low_complexity 1 66 0 280 208 0 0 chr5 195088234 195088287 -7997245 - AluJ/monomer SINE Alu 0 302 250 2120 138 26 3 chr5 195088313 195088662 -7996870 - L1MD1 LINE L1 -225 6017 5661 20682 29 2 6 chr5 195088662 195090326 -7995206 - L1PA2 LINE L1 0 6155 4502 2834 0 0 0 chr5 195090326 195090625 -7994907 - AluYa5 SINE Alu -12 299 1 20682 29 2 6 chr5 195090625 195092090 -7993442 - L1PA2 LINE L1 -1653 4502 3034 312 273 91 8 chr5 195092445 195092577 -7992955 + MIR SINE MIR 29 171 -91 225 191 0 0 chr5 195092617 195092659 -7992873 + (TG)n Simple_repeat Simple_repeat 1 42 0 2274 91 0 0 chr5 195092716 195093030 -7992502 - AluSg SINE Alu 0 319 6 21 0 0 0 chr5 195093103 195093124 -7992408 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 195093418 195093439 -7992093 + AT_rich Low_complexity Low_complexity 1 21 0 493 306 112 5 chr5 195093490 195093686 -7991846 + L2 LINE L2 2650 2866 -448 223 70 23 23 chr5 195093693 195093736 -7991796 + (TTCTCC)n Simple_repeat Simple_repeat 4 46 0 563 281 37 29 chr5 195094659 195095103 -7990429 + L1ME LINE L1 5112 5559 -603 1161 69 0 0 chr5 195095149 195095293 -7990239 - L1PA5 LINE L1 -2 6152 6009 250 264 0 55 chr5 195095459 195095550 -7989982 + L1P4 LINE L1 5731 5816 -350 2297 122 0 0 chr5 195095781 195096093 -7989439 + AluSx SINE Alu 1 312 0 1572 112 8 46 chr5 195096259 195096518 -7989014 + AluSq SINE Alu 12 260 -53 329 261 96 105 chr5 195097691 195098044 -7987488 + L2 LINE L2 2851 3200 -72 598 208 19 52 chr5 195098336 195098490 -7987042 - MER5B DNA MER1_type -28 150 2 304 307 157 0 chr5 195098510 195098663 -7986869 - MER5B DNA MER1_type 0 178 2 297 269 14 85 chr5 195099756 195099897 -7985635 - MIR SINE MIR 0 262 132 648 272 193 15 chr5 195100094 195100425 -7985107 + L2 LINE L2 2919 3308 -5 519 286 138 10 chr5 195100855 195101051 -7984481 + MIR SINE MIR 29 249 -13 884 94 43 4 chr5 195101055 195101505 -7984027 + (TGGA)n Simple_repeat Simple_repeat 1 467 0 453 241 188 0 chr5 195101754 195101887 -7983645 - MIR SINE MIR 0 262 105 210 225 0 40 chr5 195101892 195102010 -7983522 + L2 LINE L2 3158 3313 0 307 242 11 11 chr5 195102206 195102305 -7983227 - L1ME1 LINE L1 -3 6181 6076 2758 210 49 47 chr5 195102305 195103235 -7982297 - L1ME1 LINE L1 -18 6542 5551 1290 280 31 18 chr5 195103280 195103831 -7981701 - L1ME1 LINE L1 -4405 2316 1705 1131 265 54 97 chr5 195104063 195104859 -7980673 - L1ME1 LINE L1 -5169 1361 600 605 309 13 51 chr5 195105143 195105208 -7980324 + MIR SINE MIR 28 94 -168 2316 220 83 2 chr5 195105208 195105726 -7979806 + MLT1F1 LTR MaLR 4 563 -4 605 309 13 51 chr5 195105726 195105896 -7979636 + MIR SINE MIR 94 254 -8 2099 100 3 3 chr5 195106148 195106449 -7979083 - AluSx SINE Alu -11 301 1 296 369 9 0 chr5 195106631 195106742 -7978790 - MIR SINE MIR -126 136 25 207 0 0 0 chr5 195107290 195107313 -7978219 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 2085 65 0 11 chr5 195107318 195107594 -7977938 - AluSc SINE Alu -36 273 1 205 211 70 0 chr5 195107975 195108032 -7977500 - L3 LINE CR1 -108 1469 1409 1738 206 139 0 chr5 195108943 195109346 -7976186 - MLT1C LTR MaLR -8 459 1 355 346 50 16 chr5 195109565 195109747 -7975785 + MIR SINE MIR 32 219 -43 8012 139 11 11 chr5 195109801 195111359 -7974173 + L1P1 LINE L1 3961 5517 -638 1014 251 177 14 chr5 195111569 195112222 -7973310 - L2 LINE L2 0 3313 2554 3005 151 14 34 chr5 195112978 195113560 -7971972 - L1MA10 LINE L1 -7 6327 5758 203 295 49 0 chr5 195113573 195113634 -7971898 + L2 LINE L2 2915 2978 -335 364 215 63 0 chr5 195114093 195114172 -7971360 + MIR SINE MIR 71 154 -108 1468 201 7 13 chr5 195114280 195114584 -7970948 - AluJo SINE Alu -3 309 8 378 304 0 10 chr5 195115079 195115181 -7970351 + MIR SINE MIR 48 148 -114 944 285 24 8 chr5 195115695 195115941 -7969591 + MIR SINE MIR 5 254 -8 2210 75 0 4 chr5 195115972 195116251 -7969281 + AluSc SINE Alu 1 278 -31 186 71 0 0 chr5 195116254 195116282 -7969250 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 568 302 34 8 chr5 195116298 195116566 -7968966 - L2 LINE L2 -1117 2197 1923 191 196 179 18 chr5 195116858 195116914 -7968618 + MIR3 SINE MIR 15 79 -129 934 205 124 19 chr5 195116982 195117241 -7968291 - L1ME3 LINE L1 -206 5956 5671 321 269 131 8 chr5 195117249 195117379 -7968153 - L1ME3 LINE L1 -1784 4362 4217 599 240 113 94 chr5 195117398 195117865 -7967667 - MLT1K LTR MaLR 0 476 1 5311 119 7 7 chr5 195118203 195119218 -7966314 + L1PB3 LINE L1 4977 5992 -162 1163 79 6 0 chr5 195119218 195119382 -7966150 + AluY SINE Alu 140 304 -7 680 124 0 155 chr5 195119382 195119464 -7966068 + L1PB3 LINE L1 6012 6059 -95 2016 84 42 3 chr5 195119464 195119748 -7965784 + AluSp SINE Alu 1 295 -18 680 124 0 155 chr5 195119748 195119826 -7965706 + L1PB3 LINE L1 6059 6147 -7 23 0 0 0 chr5 195119831 195119854 -7965678 + AT_rich Low_complexity Low_complexity 1 23 0 2210 208 70 37 chr5 195120102 195120570 -7964962 - L1ME2 LINE L1 -10 6154 5660 2267 90 0 7 chr5 195120570 195120880 -7964652 - AluY SINE Alu -3 308 1 2210 208 70 37 chr5 195120880 195121012 -7964520 - L1ME2 LINE L1 -504 5660 5534 196 260 79 79 chr5 195121022 195121149 -7964383 - L2 LINE L2 -609 2705 2579 236 324 164 19 chr5 195122152 195122670 -7962862 - L2 LINE L2 -500 2814 2222 230 167 0 42 chr5 195122724 195122772 -7962760 + MIR SINE MIR 104 149 -113 553 325 66 40 chr5 195123274 195123502 -7962030 - MIR SINE MIR -1 261 28 201 297 44 22 chr5 195123534 195123625 -7961907 + L2 LINE L2 2638 2730 -584 192 270 35 87 chr5 195123895 195124010 -7961522 + L2 LINE L2 3203 3311 -2 341 211 66 38 chr5 195124400 195124535 -7960997 - MIR SINE MIR -48 160 16 378 307 74 6 chr5 195124884 195125047 -7960485 + MIR SINE MIR 83 256 -6 332 359 17 50 chr5 195125095 195125276 -7960256 - MIR SINE MIR -4 258 84 1496 91 5 14 chr5 195125753 195125973 -7959559 + AluSg/x SINE Alu 75 292 -18 351 280 269 14 chr5 195125986 195126343 -7959189 + L1MC4a LINE L1 5724 6171 -1637 337 305 26 60 chr5 195126542 195126644 -7958888 + L1MC4a LINE L1 6386 6483 -1325 2092 126 0 3 chr5 195126644 195126953 -7958579 - AluSg SINE Alu -1 309 2 337 305 26 60 chr5 195126953 195127001 -7958531 + L1MC4a LINE L1 6483 6531 -1277 302 310 132 0 chr5 195129468 195129597 -7955935 - L2 LINE L2 -2 3270 3125 211 306 47 0 chr5 195129680 195129765 -7955767 - MIR SINE MIR -70 192 104 199 343 67 29 chr5 195129967 195130072 -7955460 - MIR SINE MIR 0 262 154 476 287 56 7 chr5 195130104 195130247 -7955285 - MIR SINE MIR -109 153 4 183 264 39 118 chr5 195131221 195131399 -7954133 - L2 LINE L2 -192 3080 2917 280 223 21 32 chr5 195131977 195132071 -7953461 + CT-rich Low_complexity Low_complexity 1 93 0 339 261 58 36 chr5 195132260 195132398 -7953134 + MIR SINE MIR 95 235 -27 554 60 0 24 chr5 195132956 195133040 -7952492 + (GGAA)n Simple_repeat Simple_repeat 1 82 0 1895 170 49 60 chr5 195133048 195133508 -7952024 - MLT1C LTR MaLR -11 439 1 262 245 0 0 chr5 195133717 195133770 -7951762 - MLT1C LTR MaLR -99 368 316 487 259 42 14 chr5 195133774 195133917 -7951615 - MIR SINE MIR -109 153 7 182 286 18 0 chr5 195134274 195134330 -7951202 + MIR SINE MIR 105 161 -101 * 435 320 35 43 chr5 195134320 195134576 -7950956 - L2 LINE L2 -853 2461 2208 340 272 32 82 chr5 195134670 195134828 -7950704 - L2 LINE L2 -173 3099 2950 629 274 78 45 chr5 195134929 195135295 -7950237 - MLT1J2 LTR MaLR 0 450 64 334 302 0 8 chr5 195135393 195135519 -7950013 + MER117 DNA MER1_type 41 165 -32 646 214 8 0 chr5 195135748 195135879 -7949653 + FRAM SINE Alu 44 175 -1 4411 230 56 16 chr5 195136399 195136580 -7948952 + L1MC4a LINE L1 6416 6588 -1220 1037 76 6 0 chr5 195136580 195136737 -7948795 + (TAGA)n Simple_repeat Simple_repeat 4 161 0 4411 230 56 16 chr5 195136737 195137738 -7947794 + L1MC4a LINE L1 6588 7645 -163 22833 123 8 12 chr5 195137919 195141560 -7943972 + L1P LINE L1 872 4499 -1647 2618 20 0 0 chr5 195141560 195141860 -7943672 + AluYa5 SINE Alu 1 300 -11 192 77 0 0 chr5 195141863 195141889 -7943643 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1406 161 17 2 chr5 195141912 195142245 -7943287 + MER21B LTR ERV1 1 459 -472 2160 16 4 4 chr5 195192335 195192580 -7892952 + AluYa5 SINE Alu 46 290 -21 901 318 96 14 chr5 195192653 195193207 -7892325 - L1ME4a LINE L1 -24 6097 5499 3375 181 12 12 chr5 195195173 195195859 -7889673 - L1 LINE L1 -1500 4646 3961 293 346 59 7 chr5 195195937 195196090 -7889442 - MIR SINE MIR -70 192 32 1774 205 136 0 chr5 195196309 195196713 -7888819 + MLT1C LTR MaLR 1 459 -8 925 286 40 35 chr5 195197497 195197843 -7887689 - L1ME LINE L1 -5720 350 3 801 243 240 0 chr5 195199215 195199552 -7885980 + L2 LINE L2 2896 3313 0 291 188 60 94 chr5 195199555 195199618 -7885914 + MIR SINE MIR 83 142 -120 4473 89 2 11 chr5 195199618 195200238 -7885294 + L1PA14 LINE L1 5546 6159 -2 291 188 60 94 chr5 195200238 195200291 -7885241 + MIR SINE MIR 142 195 -67 1311 72 0 0 chr5 195200711 195200891 -7884641 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 337 336 97 16 chr5 195200880 195201231 -7884301 + L2 LINE L2 2755 3139 -174 453 241 188 0 chr5 195201271 195201404 -7884128 - MIR SINE MIR 0 262 105 203 212 356 34 chr5 195201409 195201527 -7884005 + L2 LINE L2 3158 3313 0 315 242 11 11 chr5 195201723 195201822 -7883710 - L1ME1 LINE L1 -3 6181 6076 2758 210 49 47 chr5 195201822 195202752 -7882780 - L1ME1 LINE L1 -18 6428 5437 1395 256 29 21 chr5 195202797 195203307 -7882225 - L1ME1 LINE L1 -4405 2202 1504 909 239 52 111 chr5 195203581 195204212 -7881320 - L1ME1 LINE L1 -5169 1247 654 5378 140 5 5 chr5 195204399 195205789 -7879743 + L1PB3 LINE L1 4601 5992 -162 1163 79 6 0 chr5 195205789 195205953 -7879579 + AluY SINE Alu 140 304 -7 680 124 0 155 chr5 195205953 195206035 -7879497 + L1PB3 LINE L1 6012 6059 -95 2016 84 42 3 chr5 195206035 195206319 -7879213 + AluSp SINE Alu 1 295 -18 680 124 0 155 chr5 195206319 195206397 -7879135 + L1PB3 LINE L1 6059 6147 -7 22 0 0 0 chr5 195206402 195206424 -7879108 + AT_rich Low_complexity Low_complexity 1 22 0 2216 212 70 35 chr5 195206672 195207139 -7878393 - L1ME2 LINE L1 -10 6154 5660 2267 90 0 7 chr5 195207139 195207449 -7878083 - AluY SINE Alu -3 308 1 2216 212 70 35 chr5 195207449 195207581 -7877951 - L1ME2 LINE L1 -504 5660 5534 196 260 79 79 chr5 195207591 195207718 -7877814 - L2 LINE L2 -609 2705 2579 293 261 115 66 chr5 195208251 195208477 -7877055 + Charlie2 DNA MER1_type 77 313 -2469 636 242 60 0 chr5 195208636 195208818 -7876714 + Charlie2a DNA MER1_type 1478 1670 -1192 376 260 12 64 chr5 195208798 195208971 -7876561 + Charlie2a DNA MER1_type 2699 2862 0 * 2015 134 16 0 chr5 195210323 195210628 -7874904 + AluSx SINE Alu 1 310 -2 267 79 0 0 chr5 195210987 195211025 -7874507 + (GGAA)n Simple_repeat Simple_repeat 1 38 0 1908 168 49 60 chr5 195211033 195211493 -7874039 - MLT1C LTR MaLR -11 439 1 262 245 0 0 chr5 195211702 195211755 -7873777 - MLT1C LTR MaLR -99 368 316 487 259 42 14 chr5 195211759 195211902 -7873630 - MIR SINE MIR -109 153 7 182 286 18 0 chr5 195212253 195212309 -7873223 + MIR SINE MIR 105 161 -101 * 464 327 35 35 chr5 195212299 195212553 -7872979 - L2 LINE L2 -853 2461 2208 381 283 19 28 chr5 195212647 195212753 -7872779 - L2 LINE L2 -173 3099 2995 311 321 51 0 chr5 195213001 195213138 -7872394 - MER113 DNA MER1_type? -25 496 353 485 283 60 40 chr5 195213174 195213425 -7872107 - MER113 DNA MER1_type? -250 271 16 589 302 30 14 chr5 195213857 195214298 -7871234 + L1ME LINE L1 5112 5559 -603 1097 69 0 0 chr5 195214343 195214487 -7871045 - L1PA5 LINE L1 -2 6152 6009 259 345 5 40 chr5 195214512 195214784 -7870748 + L1P4 LINE L1 5595 5859 -311 2189 122 0 0 chr5 195214975 195215287 -7870245 + AluSx SINE Alu 1 312 0 1725 137 3 48 chr5 195215453 195215768 -7869764 + AluJb SINE Alu 12 312 0 288 331 63 11 chr5 195215851 195216026 -7869506 - L2 LINE L2 -785 2529 2346 385 275 44 62 chr5 195216653 195216813 -7868719 + MIR3 SINE MIR 23 179 -29 350 293 66 0 chr5 195217288 195217394 -7868138 - MER81 DNA DNA -1 113 1 1411 222 45 68 chr5 195217670 195218138 -7867394 + MLT1C LTR MaLR 2 458 -9 646 298 62 107 chr5 195218149 195218805 -7866727 + L2 LINE L2 2673 3313 0 381 253 162 0 chr5 195218898 195218997 -7866535 - MIR SINE MIR -141 121 7 487 308 76 73 chr5 195219311 195219668 -7865864 + L2 LINE L2 2909 3266 -6 2287 81 0 3 chr5 195219677 195219974 -7865558 - AluSc SINE Alu -13 296 1 944 285 24 8 chr5 195220005 195220251 -7865281 - MIR SINE MIR -8 254 5 888 100 38 6 chr5 195220610 195221096 -7864436 + (TCCA)n Simple_repeat Simple_repeat 1 501 0 554 292 138 5 chr5 195221100 195221295 -7864237 - MIR SINE MIR -13 249 29 648 272 193 15 chr5 195221725 195222056 -7863476 - L2 LINE L2 -5 3308 2919 297 269 14 85 chr5 195222253 195222394 -7863138 + MIR SINE MIR 132 262 0 1014 251 177 14 chr5 195222830 195223483 -7862049 - L2 LINE L2 0 3313 2554 2974 153 14 34 chr5 195224216 195224798 -7860734 - L1MA10 LINE L1 -7 6327 5758 203 295 49 0 chr5 195224811 195224872 -7860660 + L2 LINE L2 2915 2978 -335 364 215 63 0 chr5 195225331 195225410 -7860122 + MIR SINE MIR 71 154 -108 1461 201 7 13 chr5 195225518 195225821 -7859711 - AluJo SINE Alu -4 308 8 204 125 0 0 chr5 195225908 195225940 -7859592 + (A)n Simple_repeat Simple_repeat 1 32 0 407 345 7 7 chr5 195226236 195226378 -7859154 + MIR SINE MIR 7 148 -114 267 267 99 20 chr5 195226949 195227050 -7858482 + L2 LINE L2 2976 3084 -188 584 285 73 23 chr5 195227199 195227459 -7858073 - L2 LINE L2 -4 3309 3037 205 211 70 0 chr5 195228014 195228071 -7857461 + L3 LINE CR1 1409 1469 -108 2190 66 0 0 chr5 195228453 195228726 -7856806 + AluSc SINE Alu 1 273 -36 207 0 0 0 chr5 195228731 195228754 -7856778 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 323 354 9 0 chr5 195229299 195229412 -7856120 + MIR SINE MIR 23 136 -126 2105 109 3 3 chr5 195229595 195229906 -7855626 + AluSx SINE Alu 1 311 -1 606 316 12 49 chr5 195230079 195230257 -7855275 - MIR SINE MIR 0 262 94 2316 220 83 2 chr5 195230257 195230775 -7854757 - MLT1F1 LTR MaLR -4 563 4 606 316 12 49 chr5 195230775 195230840 -7854692 - MIR SINE MIR -168 94 28 378 0 0 0 chr5 195231131 195231173 -7854359 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 322 164 19 chr5 195231192 195231710 -7853822 - L2 LINE L2 -500 2814 2222 230 167 0 42 chr5 195231764 195231812 -7853720 + MIR SINE MIR 104 149 -113 568 320 66 40 chr5 195232315 195232543 -7852989 - MIR SINE MIR -1 261 28 201 297 44 22 chr5 195232575 195232666 -7852866 + L2 LINE L2 2638 2730 -584 192 270 35 87 chr5 195232936 195233051 -7852481 + L2 LINE L2 3203 3311 -2 341 211 66 38 chr5 195233440 195233575 -7851957 - MIR SINE MIR -48 160 16 222 159 16 48 chr5 195234120 195234183 -7851349 + (CAGGG)n Simple_repeat Simple_repeat 3 63 0 201 74 0 0 chr5 195234304 195234331 -7851201 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 261 274 253 7 chr5 195234358 195234654 -7850878 + L2 LINE L2 2297 2665 -649 281 260 170 0 chr5 195234945 195235045 -7850487 + L2 LINE L2 3158 3274 -39 * 353 261 62 31 chr5 195235035 195235165 -7850367 - MER91C DNA MER1_type -6 134 1 279 220 0 0 chr5 195235165 195235212 -7850320 - L2 LINE L2 -64 3208 3162 395 284 98 53 chr5 195235229 195235454 -7850078 - MIR SINE MIR -9 253 19 375 280 170 25 chr5 195235832 195236032 -7849500 + MIR SINE MIR 18 246 -16 562 261 87 0 chr5 195236196 195236357 -7849175 + MER58A DNA MER1_type 36 210 -14 228 233 33 33 chr5 195236761 195236821 -7848711 + L2 LINE L2 3213 3272 0 292 294 118 0 chr5 195236993 195237129 -7848403 - MIR SINE MIR -6 256 105 759 234 35 15 chr5 195237340 195237537 -7847995 - MIR SINE MIR -3 259 59 1506 83 64 9 chr5 195237616 195237834 -7847698 + L1PA10 LINE L1 5939 6168 0 463 265 126 0 chr5 195238490 195238641 -7846891 + MIR SINE MIR 92 261 -1 1976 120 7 0 chr5 195238708 195238991 -7846541 + AluSx SINE Alu 1 285 -27 22 0 0 0 chr5 195238991 195239013 -7846519 + AT_rich Low_complexity Low_complexity 1 22 0 3843 167 78 67 chr5 195239022 195239855 -7845677 - MER21B LTR ERV1 -21 842 1 213 39 0 0 chr5 195239878 195239904 -7845628 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2279 94 0 0 chr5 195239907 195240206 -7845326 - AluSg SINE Alu -11 299 1 407 348 21 21 chr5 195241050 195241237 -7844295 - MIR SINE MIR -41 221 35 231 363 30 30 chr5 195241714 195241849 -7843683 + L2 LINE L2 3133 3267 -5 204 313 0 0 chr5 195242084 195242148 -7843384 - MIR SINE MIR -112 150 87 406 174 87 52 chr5 195243033 195243148 -7842384 - L2 LINE L2 -15 3298 3180 376 282 65 91 chr5 195243698 195244007 -7841525 - L1ME4a LINE L1 -22 6099 5799 503 274 90 55 chr5 195244078 195244195 -7841337 - L1ME4a LINE L1 -1281 4865 4754 1863 133 11 0 chr5 195244195 195244512 -7841020 - AluSp SINE Alu 0 320 1 503 274 90 55 chr5 195244512 195245203 -7840329 - L1ME4a LINE L1 -1392 4754 4027 434 221 0 27 chr5 195245304 195245630 -7839902 + (TTA)n Simple_repeat Simple_repeat 1 317 0 460 298 71 43 chr5 195245734 195246381 -7839151 - L1ME4a LINE L1 -2362 3784 3120 1955 155 0 26 chr5 195246385 195246689 -7838843 - MER1B DNA MER1_type 0 339 44 369 329 42 75 chr5 195247143 195247356 -7838176 - L2 LINE L2 -42 3230 3025 311 247 82 62 chr5 195247505 195247651 -7837881 + MIR3 SINE MIR 5 153 -55 21 36 0 0 chr5 195247831 195247859 -7837673 + AT_rich Low_complexity Low_complexity 1 28 0 247 301 10 48 chr5 195248514 195248617 -7836915 - MIR SINE MIR -62 200 102 408 250 55 67 chr5 195248897 195249061 -7836471 - MIR SINE MIR -80 182 21 380 250 7 0 chr5 195249170 195249314 -7836218 + (CA)n Simple_repeat Simple_repeat 2 146 0 388 301 48 52 chr5 195249793 195250042 -7835490 - MER112 DNA MER1_type -6 254 7 333 318 41 41 chr5 195250471 195250666 -7834866 - L2 LINE L2 -7 3306 3112 659 190 69 23 chr5 195250690 195250864 -7834668 - MLT1J1 LTR MaLR -32 414 233 * 2432 164 26 5 chr5 195250852 195251272 -7834260 - MLT1C LTR MaLR -38 429 1 406 226 59 10 chr5 195251272 195251372 -7834160 - MLT1J1 LTR MaLR -341 105 1 319 301 199 10 chr5 195252130 195252326 -7833206 - MIR SINE MIR -1 261 29 529 297 135 27 chr5 195252389 195252495 -7833037 + MIR SINE MIR 4 97 -165 2205 158 19 8 chr5 195252495 195252856 -7832676 - MLT1A1 LTR MaLR 0 365 1 529 297 135 27 chr5 195252856 195252971 -7832561 + MIR SINE MIR 97 249 -13 315 309 0 0 chr5 195252989 195253073 -7832459 + L2 LINE L2 2990 3073 -240 306 299 84 19 chr5 195253078 195253232 -7832300 + MIR SINE MIR 27 190 -72 890 222 22 0 chr5 195253310 195253495 -7832037 + MER5A DNA MER1_type 1 189 0 521 188 12 97 chr5 195253527 195253692 -7831840 - MER104 DNA Tc2 -25 155 5 439 238 28 63 chr5 195253750 195253893 -7831639 + MER5B DNA MER1_type 2 139 -39 596 251 197 0 chr5 195254303 195254486 -7831046 - MIR SINE MIR -10 252 34 428 163 76 43 chr5 195254644 195254736 -7830796 - MIR SINE MIR -52 210 116 244 156 9 5 chr5 195254742 195254794 -7830738 - MIR SINE MIR -62 146 99 364 267 57 0 chr5 195254872 195254977 -7830555 + L2 LINE L2 3142 3252 -20 315 352 11 33 chr5 195255128 195255310 -7830222 + Charlie8 DNA MER1_type 94 271 -2146 2860 22 0 0 chr5 195255772 195256085 -7829447 + AluYb8 SINE Alu 1 313 -5 198 0 0 0 chr5 195256240 195256262 -7829270 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 517 272 39 33 chr5 195256262 195256442 -7829090 - MIR SINE MIR -43 219 39 183 315 62 48 chr5 195257067 195257213 -7828319 + L2 LINE L2 2843 2990 -282 1220 247 117 58 chr5 195257566 195258105 -7827427 - MLT1K LTR MaLR -2 586 16 741 286 9 40 chr5 195258523 195258747 -7826785 - MIR SINE MIR 0 262 46 227 234 0 0 chr5 195258916 195258963 -7826569 - MLT1K LTR MaLR 0 588 542 732 164 57 47 chr5 195258964 195259167 -7826365 + L1MA8 LINE L1 6072 6279 -12 308 145 29 0 chr5 195259167 195259236 -7826296 + L1MA8 LINE L1 6217 6287 -4 732 164 57 47 chr5 195259236 195259250 -7826282 + L1MA8 LINE L1 6279 6291 0 568 306 90 34 chr5 195259400 195259723 -7825809 - MLT1K LTR MaLR -236 352 12 2306 125 0 3 chr5 195259724 195260037 -7825495 + AluSx SINE Alu 1 312 0 298 317 90 42 chr5 195260237 195260404 -7825128 + MIR SINE MIR 24 198 -64 2132 121 7 10 chr5 195260432 195260730 -7824802 - AluSx SINE Alu -15 297 1 582 291 86 55 chr5 195260945 195261433 -7824099 - L2 LINE L2 0 3313 2811 480 250 53 33 chr5 195263136 195263288 -7822244 + MIR SINE MIR 84 238 -24 201 178 44 156 chr5 195263603 195263693 -7821839 + L2 LINE L2 3027 3106 -166 216 182 0 23 chr5 195263748 195263792 -7821740 + C-rich Low_complexity Low_complexity 2 44 0 213 325 187 10 chr5 195264478 195264681 -7820851 - MIR SINE MIR -18 244 6 249 181 57 95 chr5 195264731 195264836 -7820696 - MIR SINE MIR -140 122 22 245 335 105 68 chr5 195265291 195265482 -7820050 - L2 LINE L2 -3 3269 3072 264 367 17 11 chr5 195266173 195266310 -7819222 + MIR SINE MIR 34 171 -91 687 90 0 0 chr5 195266362 195266462 -7819070 + (CA)n Simple_repeat Simple_repeat 1 100 0 281 298 30 8 chr5 195266466 195266597 -7818935 + L1ME LINE L1 5686 5819 -302 290 326 78 0 chr5 195267920 195268061 -7817471 + L2 LINE L2 2636 2787 -527 243 279 234 0 chr5 195268925 195269036 -7816496 + L2 LINE L2 3136 3272 0 332 320 10 0 chr5 195269066 195269163 -7816369 + MIR SINE MIR 92 189 -73 487 353 80 0 chr5 195269426 195269632 -7815900 - MIR SINE MIR -8 254 31 257 280 70 0 chr5 195270929 195271029 -7814503 + L2 LINE L2 3190 3296 -17 396 321 35 14 chr5 195271075 195271290 -7814242 - MIR SINE MIR -38 224 3 828 284 59 81 chr5 195271828 195272059 -7813473 - L1MC4a LINE L1 -1883 5925 5690 2032 124 42 0 chr5 195272059 195272377 -7813155 + AluSx SINE Alu 1 330 0 828 284 59 81 chr5 195272377 195272738 -7812794 - L1MC4a LINE L1 -2118 5690 5344 272 289 50 56 chr5 195272889 195272966 -7812566 + MIR3 SINE MIR 3 79 -146 1492 155 107 69 chr5 195272966 195273341 -7812191 + MLT1B LTR MaLR 1 389 -1 272 289 50 56 chr5 195273341 195273435 -7812097 + MIR3 SINE MIR 79 169 -56 348 261 42 23 chr5 195273633 195273764 -7811768 + MIR3 SINE MIR 63 199 -9 182 321 0 18 chr5 195274073 195274129 -7811403 - L2 LINE L2 -5 3267 3213 * 318 375 7 13 chr5 195274120 195274272 -7811260 + MIR SINE MIR 24 174 -88 3821 108 68 17 chr5 195274958 195275591 -7809941 - L1PA16 LINE L1 -1 6165 5497 2382 68 3 0 chr5 195275591 195275602 -7809930 - AluY SINE Alu -17 294 285 372 22 0 0 chr5 195275602 195275647 -7809885 + (TG)n Simple_repeat Simple_repeat 2 46 0 2382 68 3 0 chr5 195275647 195275927 -7809605 - AluY SINE Alu -26 285 2 3821 108 68 17 chr5 195275927 195275942 -7809590 - L1PA16 LINE L1 -669 5497 5484 7388 182 20 1 chr5 195275963 195278107 -7807425 - L1PA14 LINE L1 -1 6160 3958 1029 181 93 0 chr5 195278115 195278330 -7807202 - L1MB3 LINE L1 -47 6136 5902 548 166 54 4 chr5 195278320 195278465 -7807067 - L1MB3 LINE L1 -622 5561 5412 * 327 224 73 88 chr5 195278786 195278978 -7806554 - LTR67 LTR ERVL 0 557 369 1818 117 53 33 chr5 195279578 195279877 -7805655 - AluJo SINE Alu -7 305 1 224 306 59 24 chr5 195280250 195280335 -7805197 - MIR SINE MIR -71 191 104 297 291 49 25 chr5 195280815 195280955 -7804577 + MLT1J2 LTR MaLR 1 145 -267 * 1726 153 73 0 chr5 195280953 195281253 -7804279 - MER47A DNA MER2_type -44 322 1 397 309 113 6 chr5 195281270 195281438 -7804094 - L2 LINE L2 -2741 573 388 265 292 31 31 chr5 195281440 195281536 -7803996 - L2 LINE L2 -3178 136 41 393 252 68 0 chr5 195282473 195282576 -7802956 - MIR SINE MIR -29 233 124 2442 145 25 2 chr5 195282586 195282992 -7802540 + L1PB3 LINE L1 5740 6154 0 469 271 124 45 chr5 195283582 195283896 -7801636 + MLT1K LTR MaLR 190 528 -60 23 0 0 0 chr5 195284516 195284539 -7800993 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 195285124 195285154 -7800378 + AT_rich Low_complexity Low_complexity 1 30 0 495 267 74 56 chr5 195285223 195285493 -7800039 + ORSL DNA AcHobo 1 275 0 275 253 0 33 chr5 195285610 195285701 -7799831 + (GGGTG)n Simple_repeat Simple_repeat 4 91 0 431 326 34 0 chr5 195286177 195286352 -7799180 - MLT1K LTR MaLR -359 229 49 256 336 87 0 chr5 195286771 195286875 -7798657 + MIR SINE MIR 101 213 -49 452 306 41 0 chr5 195287574 195287721 -7797811 - MIR SINE MIR -82 180 28 1777 171 55 26 chr5 195288137 195288557 -7796975 - L1MB8 LINE L1 -12 6166 5735 601 162 43 92 chr5 195288845 195289030 -7796502 - MER104 DNA MER2_type -4 176 1 2472 175 72 0 chr5 195291418 195291903 -7793629 - L1MC1 LINE L1 0 6333 5814 204 40 0 0 chr5 195291962 195291987 -7793545 + (TAA)n Simple_repeat Simple_repeat 2 26 0 537 365 91 32 chr5 195292116 195292521 -7793011 - L1MC1 LINE L1 -426 5695 5267 316 261 54 39 chr5 195292703 195292833 -7792699 - L1MC4a LINE L1 -1954 5854 5723 * 2270 169 29 7 chr5 195292806 195293221 -7792311 - L1MC1 LINE L1 -465 5868 5445 976 223 117 11 chr5 195293327 195293686 -7791846 + MLT1J2 LTR MaLR 35 445 -1 3636 146 24 13 chr5 195293707 195294304 -7791228 + LTR26 LTR ERV1 1 603 0 543 263 38 8 chr5 195294335 195294468 -7791064 + MIR SINE MIR 124 260 -2 972 183 38 5 chr5 195295043 195295256 -7790276 - MLT1D LTR MaLR 0 505 286 1222 116 79 0 chr5 195295283 195295526 -7790006 - L1MA3 LINE L1 -3 6297 6037 733 192 82 46 chr5 195295533 195295752 -7789780 - MLT1D LTR MaLR -271 234 8 257 297 146 81 chr5 195296681 195297153 -7788379 + MLT1K LTR MaLR 20 522 -66 190 316 31 41 chr5 195297236 195297334 -7788198 - MIR SINE MIR 0 262 166 334 323 108 25 chr5 195297798 195297956 -7787576 - MIR SINE MIR -72 190 20 1965 144 90 49 chr5 195298242 195298653 -7786879 - MSTC LTR MaLR 0 428 1 1252 178 19 4 chr5 195299770 195300028 -7785504 + L1MA9 LINE L1 6011 6272 -40 1145 152 5 0 chr5 195300050 195300247 -7785285 + MER6 DNA MER2_type 668 865 0 2409 97 0 0 chr5 195300252 195300550 -7784982 - AluSq SINE Alu -14 299 2 190 0 67 0 chr5 195301515 195301545 -7783987 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 221 293 61 37 chr5 195302205 195302287 -7783245 + MIR SINE MIR 60 143 -65 233 340 41 20 chr5 195302547 195302694 -7782838 + MLT1J LTR MaLR 360 509 -2 743 269 76 43 chr5 195302816 195303236 -7782296 + MLT1K LTR MaLR 155 588 0 180 0 0 0 chr5 195303281 195303301 -7782231 + (CA)n Simple_repeat Simple_repeat 2 21 0 201 39 0 0 chr5 195304466 195304492 -7781040 + (A)n Simple_repeat Simple_repeat 1 26 0 203 333 0 15 chr5 195305003 195305069 -7780463 - MIR SINE MIR -170 92 28 935 273 66 42 chr5 195305201 195305608 -7779924 + MLT1J LTR MaLR 28 444 -67 1597 250 127 35 chr5 195305615 195306361 -7779171 + L2 LINE L2 2401 3250 -63 2253 48 41 31 chr5 195306361 195306653 -7778879 - AluY SINE Alu -16 295 1 1597 250 127 35 chr5 195306653 195306719 -7778813 + L2 LINE L2 3250 3309 -4 1692 206 111 100 chr5 195306765 195306952 -7778580 - L1MC5 LINE L1 -53 7908 7724 942 143 0 0 chr5 195306952 195307078 -7778454 - FLAM_C SINE Alu -7 126 1 1692 206 111 100 chr5 195307078 195307092 -7778440 - L1MC5 LINE L1 -237 7724 7712 2197 106 0 26 chr5 195307092 195307403 -7778129 - AluSx SINE Alu -9 303 1 1692 206 111 100 chr5 195307403 195308039 -7777493 - L1MC5 LINE L1 -249 7712 7061 21 0 0 0 chr5 195308532 195308553 -7776979 + AT_rich Low_complexity Low_complexity 1 21 0 370 318 102 8 chr5 195309036 195309272 -7776260 + MIR SINE MIR 5 262 0 2296 89 0 0 chr5 195309436 195309753 -7775779 - AluSx SINE Alu 0 317 1 318 335 127 41 chr5 195310474 195311130 -7774402 - L2 LINE L2 -421 2893 2182 2223 125 0 22 chr5 195312245 195312564 -7772968 + AluSx SINE Alu 1 312 0 2157 115 10 3 chr5 195313362 195313666 -7771866 - AluSc SINE Alu -3 306 1 2049 118 31 0 chr5 195314508 195314797 -7770735 - AluSq SINE Alu -15 298 1 566 229 101 28 chr5 195315091 195315309 -7770223 + MLT1D LTR MaLR 59 292 -213 2157 115 10 3 chr5 195315538 195315842 -7769690 - AluSc SINE Alu -3 306 1 400 293 54 7 chr5 195316044 195316191 -7769341 - MLT1L LTR MaLR -41 574 421 33 0 0 0 chr5 195316232 195316265 -7769267 + AT_rich Low_complexity Low_complexity 1 33 0 2049 118 31 0 chr5 195316658 195316947 -7768585 - AluSq SINE Alu -15 298 1 1656 192 96 24 chr5 195317242 195317659 -7767873 + MLT1D LTR MaLR 59 505 0 1737 188 132 22 chr5 195318798 195319122 -7766410 - MLT1C LTR MaLR -5 462 81 1978 128 27 7 chr5 195319122 195319418 -7766114 + AluJo SINE Alu 1 302 -10 1737 188 132 22 chr5 195319418 195319509 -7766023 - MLT1C LTR MaLR -386 81 1 1433 83 0 0 chr5 195319865 195320034 -7765498 + AluSc SINE Alu 1 169 -140 566 231 7 35 chr5 195320034 195320177 -7765355 - L1MC/D LINE L1 -720 5624 5486 865 78 35 0 chr5 195320184 195320299 -7765233 + AluSg/x SINE Alu 174 292 -18 525 256 13 45 chr5 195320521 195320701 -7764831 - MIR SINE MIR -65 143 11 3510 206 41 30 chr5 195321525 195321895 -7763637 - L1ME1 LINE L1 -5 6161 5797 1948 190 79 5 chr5 195321895 195322264 -7763268 - MSTD LTR MaLR 0 396 1 3510 206 41 30 chr5 195322264 195322640 -7762892 - L1ME1 LINE L1 -369 5797 5427 2493 72 0 0 chr5 195322640 195322944 -7762588 + AluY SINE Alu 1 304 -7 3510 206 41 30 chr5 195322944 195323492 -7762040 - L1ME1 LINE L1 -739 5427 4862 1932 97 4 0 chr5 195324366 195324623 -7760909 + AluSx SINE Alu 54 311 -1 347 221 0 81 chr5 195324685 195324771 -7760761 + MLT1D LTR MaLR 1 79 -426 1660 209 14 83 chr5 195324787 195325207 -7760325 - MER21B LTR ERV1 -171 692 302 213 217 0 0 chr5 195325606 195325652 -7759880 + CT-rich Low_complexity Low_complexity 4 49 0 770 206 106 0 chr5 195325977 195326147 -7759385 + MER5A DNA MER1_type 1 188 -1 206 265 0 0 chr5 195326582 195326631 -7758901 + A-rich Low_complexity Low_complexity 1 49 0 1438 166 83 80 chr5 195326679 195326746 -7758786 - MLT1A1 LTR MaLR -3 362 297 2154 116 3 6 chr5 195326746 195327057 -7758475 + AluSq SINE Alu 1 310 -3 1438 166 83 80 chr5 195327057 195327313 -7758219 - MLT1A1 LTR MaLR -68 297 35 8023 27 9 2 chr5 195327313 195328524 -7757008 - L1PA4 LINE L1 -3 6152 4937 1438 166 83 80 chr5 195328524 195328560 -7756972 - MLT1A1 LTR MaLR -330 35 1 408 239 45 0 chr5 195328755 195328843 -7756689 - MER5A DNA MER1_type -88 101 10 290 346 118 9 chr5 195329024 195329235 -7756297 + MIR SINE MIR 18 251 -11 363 299 92 23 chr5 195329696 195329870 -7755662 + MIR SINE MIR 23 208 -54 227 31 31 0 chr5 195329881 195329913 -7755619 + (CA)n Simple_repeat Simple_repeat 1 33 0 181 308 209 0 chr5 195329956 195330047 -7755485 + L2 LINE L2 3153 3262 -10 284 227 0 34 chr5 195330206 195330294 -7755238 + MER117 DNA MER1_type 1 85 -112 1233 290 75 49 chr5 195330427 195330789 -7754743 + L1ME3A LINE L1 2841 3192 -2954 1706 164 6 26 chr5 195330789 195331101 -7754431 - AluJb SINE Alu -6 306 1 1233 290 75 49 chr5 195331101 195331809 -7753723 + L1ME3A LINE L1 3192 3955 -2191 1043 32 79 8 chr5 195331809 195331935 -7753597 - MER85 DNA T2_type -4 135 1 1233 290 75 49 chr5 195331935 195332180 -7753352 + L1ME3A LINE L1 3955 4192 -1954 241 289 66 8 chr5 195332266 195332387 -7753145 + L1P LINE L1 4902 5029 -1117 1175 274 108 17 chr5 195332625 195332879 -7752653 + L1ME3A LINE L1 5308 5538 -632 2288 120 0 0 chr5 195332879 195333187 -7752345 + AluSx SINE Alu 1 308 -4 1175 274 108 17 chr5 195333187 195333527 -7752005 + L1ME3A LINE L1 5538 5956 -214 261 160 32 184 chr5 195334274 195334399 -7751133 + MIR SINE MIR 101 206 -56 3608 151 13 8 chr5 195334403 195334998 -7750534 + L1MB2 LINE L1 5573 6170 -1 261 0 0 0 chr5 195335961 195335990 -7749542 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 315 0 0 0 chr5 195335989 195336024 -7749508 + (TC)n Simple_repeat Simple_repeat 1 35 0 249 303 79 13 chr5 195336451 195336603 -7748929 + MIR SINE MIR 39 200 -62 525 260 59 85 chr5 195337124 195337512 -7748020 - L1ME4a LINE L1 0 6121 5744 461 220 23 53 chr5 195337879 195338011 -7747521 - L1MEc LINE L1 -6232 164 37 746 301 52 76 chr5 195338533 195338860 -7746672 + L3 LINE CR1 1158 1474 -103 3018 106 34 2 chr5 195338860 195339275 -7746257 - MSTA LTR MaLR 0 428 1 746 301 52 76 chr5 195339275 195339366 -7746166 + L3 LINE CR1 1474 1566 -11 289 335 87 19 chr5 195339854 195340015 -7745517 + MIR SINE MIR 47 218 -44 211 363 50 0 chr5 195340071 195340151 -7745381 + L2 LINE L2 3154 3237 -35 10150 185 36 60 chr5 195340483 195340897 -7744635 + L1 LINE L1 2790 3213 -2933 1742 186 0 3 chr5 195340897 195341187 -7744345 - AluJo SINE Alu -23 289 1 216 67 0 0 chr5 195341189 195341219 -7744313 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 10150 185 36 60 chr5 195341219 195341305 -7744227 + L1 LINE L1 3214 3301 -2845 1928 230 28 7 chr5 195341305 195341739 -7743793 - LTR47B LTR ERVL 0 443 1 10150 185 36 60 chr5 195341739 195342103 -7743429 + L1 LINE L1 3301 3673 -2473 194 81 27 0 chr5 195342103 195342140 -7743392 + (CAA)n Simple_repeat Simple_repeat 2 39 0 10150 185 36 60 chr5 195342140 195343817 -7741715 + L1 LINE L1 3673 5273 -873 1001 226 8 8 chr5 195343805 195344048 -7741484 + L1MB2 LINE L1 3459 3701 -2445 * 534 103 0 0 chr5 195344175 195344253 -7741279 + (TA)n Simple_repeat Simple_repeat 2 79 0 1389 111 18 0 chr5 195344254 195344519 -7741013 + L1PB1 LINE L1 5794 6143 -8 5775 116 16 14 chr5 195344551 195345439 -7740093 + L1PA15 LINE L1 5276 6165 0 443 203 47 54 chr5 195345436 195345584 -7739948 + L1MB2 LINE L1 4864 5010 -1136 * 1318 244 104 4 chr5 195345798 195346270 -7739262 + L1MB2 LINE L1 5651 6169 -2 405 286 0 30 chr5 195347453 195347586 -7737946 + MIR SINE MIR 112 240 -22 778 251 137 44 chr5 195347675 195348149 -7737383 + LTR33 LTR ERVL 1 518 -3 417 299 30 18 chr5 195348207 195348374 -7737158 - MIR SINE MIR -73 189 21 276 200 0 0 chr5 195349293 195349358 -7736174 + (TCCA)n Simple_repeat Simple_repeat 2 66 0 256 369 12 0 chr5 195349383 195349551 -7735981 + (TTCA)n Simple_repeat Simple_repeat 3 172 0 231 36 0 0 chr5 195349556 195349584 -7735948 + (TCCA)n Simple_repeat Simple_repeat 2 29 0 264 224 0 0 chr5 195349660 195349727 -7735805 + (TCCA)n Simple_repeat Simple_repeat 3 69 0 228 250 31 0 chr5 195349776 195349840 -7735692 + (TCCA)n Simple_repeat Simple_repeat 4 69 0 620 270 10 39 chr5 195349891 195350095 -7735437 - MIR SINE MIR 0 262 65 241 350 67 8 chr5 195350263 195350383 -7735149 - MIR3 SINE MIR -79 129 3 1855 175 38 62 chr5 195350553 195350953 -7734579 - MLT1B LTR MaLR 0 390 1 5093 170 24 41 chr5 195351515 195351929 -7733603 + L1PB1 LINE L1 3988 4407 -1744 351 0 0 0 chr5 195351929 195351968 -7733564 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 5093 170 24 41 chr5 195351968 195353395 -7732137 + L1PB1 LINE L1 4407 5792 -359 516 105 0 0 chr5 195353395 195353471 -7732061 + (TA)n Simple_repeat Simple_repeat 2 77 0 5093 170 24 41 chr5 195353471 195353642 -7731890 + L1PB1 LINE L1 5792 5964 -187 399 210 34 55 chr5 195353978 195354168 -7731364 - MLT1K LTR MaLR -15 573 325 400 281 113 19 chr5 195354198 195354358 -7731174 - MLT1K LTR MaLR -345 243 69 310 352 32 16 chr5 195354416 195354541 -7730991 + MIR SINE MIR 28 154 -108 868 192 48 34 chr5 195355298 195355506 -7730026 + MLT1B LTR MaLR 1 211 -179 1280 133 14 0 chr5 195355506 195355717 -7729815 - L1M2 LINE L1 -708 5604 5391 221 200 0 18 chr5 195355720 195355775 -7729757 + (TA)n Simple_repeat Simple_repeat 1 54 0 682 143 57 0 chr5 195355777 195355882 -7729650 - FLAM_C SINE Alu -18 125 15 449 120 120 8 chr5 195355885 195356018 -7729514 - L1M2 LINE L1 -755 5391 5244 591 296 37 0 chr5 195356672 195356861 -7728671 - MIR SINE MIR -36 226 31 188 276 52 0 chr5 195356942 195357000 -7728532 + MIR SINE MIR 133 193 -69 324 277 43 0 chr5 195357306 195357400 -7728132 + MIR SINE MIR 86 183 -79 191 285 30 156 chr5 195358153 195358486 -7727046 + L2 LINE L2 2981 3271 -1 9193 49 11 1 chr5 195358837 195360031 -7725501 - L1P LINE L1 -1479 4667 3462 1614 122 0 9 chr5 195360031 195360260 -7725272 - AluSc SINE Alu -82 227 1 604 195 12 65 chr5 195360262 195360431 -7725101 + MER58B DNA MER1_type 174 333 -8 342 183 0 0 chr5 195360454 195360525 -7725007 + (ATG)n Simple_repeat Simple_repeat 1 71 0 254 241 19 0 chr5 195361695 195361749 -7723783 + L2 LINE L2 3184 3238 -34 228 155 35 17 chr5 195362392 195362450 -7723082 + (CAA)n Simple_repeat Simple_repeat 3 61 0 303 216 0 0 chr5 195362658 195362769 -7722763 + A-rich Low_complexity Low_complexity 1 111 0 2071 172 30 23 chr5 195363066 195363536 -7721996 - L1 LINE L1 -1181 4965 4493 190 271 0 57 chr5 195364258 195364328 -7721204 + L3 LINE CR1 871 936 -641 1927 240 94 16 chr5 195364830 195365380 -7720152 - MLT1E LTR MaLR 0 593 1 1548 227 45 19 chr5 195365899 195366326 -7719206 - MER74A LTR ERVL 0 558 121 776 310 92 3 chr5 195366547 195366928 -7718604 - L2 LINE L2 -584 2730 2316 1868 215 23 67 chr5 195366932 195367441 -7718091 + MLT1D LTR MaLR 5 492 -13 2156 99 20 0 chr5 195367441 195367733 -7717799 + AluSg SINE Alu 1 298 -12 1868 215 23 67 chr5 195367733 195367745 -7717787 + MLT1D LTR MaLR 492 503 -2 216 0 0 0 chr5 195367866 195367890 -7717642 + (GA)n Simple_repeat Simple_repeat 1 24 0 4160 204 92 20 chr5 195369075 195370244 -7715288 - Charlie1 DNA MER1_type -73 2688 1436 235 198 22 77 chr5 195370343 195370434 -7715098 + MLT1J1 LTR MaLR 58 143 -303 342 238 76 107 chr5 195370732 195370929 -7714603 - L1MC5 LINE L1 -230 7731 7529 2220 109 10 10 chr5 195370929 195371241 -7714291 - AluSx SINE Alu 0 312 1 342 238 76 107 chr5 195371241 195371530 -7714002 - L1MC5 LINE L1 -432 7529 7260 1277 200 86 74 chr5 195371658 195372172 -7713360 - L1MC5 LINE L1 -735 7226 6707 315 244 130 0 chr5 195372521 195372636 -7712896 - MIR SINE MIR -62 146 17 2055 205 92 19 chr5 195372844 195373274 -7712258 + MLT2B2 LTR ERVL 2 472 -43 414 0 0 0 chr5 195373274 195373320 -7712212 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 2055 205 92 19 chr5 195373320 195373368 -7712164 + MLT2B2 LTR ERVL 472 515 0 484 140 21 0 chr5 195373455 195373548 -7711984 + GA-rich Low_complexity Low_complexity 2 96 0 1239 85 24 71 chr5 195373649 195373861 -7711671 + MLT2A1 LTR ERVL 243 444 0 241 315 14 0 chr5 195374326 195374399 -7711133 + L2 LINE L2 3194 3267 -5 234 148 37 19 chr5 195374507 195374561 -7710971 + CT-rich Low_complexity Low_complexity 2 56 0 235 313 62 0 chr5 195375463 195375543 -7709989 - MIR SINE MIR -58 150 66 2247 134 0 0 chr5 195375648 195375954 -7709578 + AluSx SINE Alu 1 306 -6 598 341 37 67 chr5 195379339 195379744 -7705788 - L2 LINE L2 0 3272 2880 291 262 0 0 chr5 195380421 195380482 -7705050 + MER81 DNA DNA 32 92 -22 1634 139 36 0 chr5 195380494 195380795 -7704737 - L1MB7 LINE L1 -284 5900 5589 425 298 0 0 chr5 195380795 195380899 -7704633 - MER81 DNA DNA -10 104 1 367 312 101 69 chr5 195381146 195381661 -7703871 + L1ME LINE L1 644 1181 -4899 311 148 0 16 chr5 195381661 195381722 -7703810 + (GGA)n Simple_repeat Simple_repeat 2 61 0 420 337 8 37 chr5 195381754 195382000 -7703532 + HAL1b LINE L1 400 638 -710 651 207 162 20 chr5 195382726 195382924 -7702608 + MIR SINE MIR 34 259 -3 220 248 274 26 chr5 195383618 195383715 -7701817 + MIR SINE MIR 58 130 -132 2449 78 0 3 chr5 195383715 195384022 -7701510 + AluSx SINE Alu 1 306 -6 220 248 274 26 chr5 195384022 195384077 -7701455 + MIR SINE MIR 130 248 -14 232 222 0 19 chr5 195384108 195384162 -7701370 + (TTA)n Simple_repeat Simple_repeat 1 53 0 415 280 0 8 chr5 195384597 195384715 -7700817 + MIR SINE MIR 25 141 -67 336 250 158 21 chr5 195385184 195385336 -7700196 - MIR SINE MIR -52 210 41 188 57 0 57 chr5 195386449 195386484 -7699048 + (TTCCC)n Simple_repeat Simple_repeat 5 37 0 564 299 41 26 chr5 195387560 195387754 -7697778 + MIR SINE MIR 2 198 -64 1424 151 27 136 chr5 195387910 195388248 -7697284 + AluJb SINE Alu 1 301 -1 1085 253 84 23 chr5 195388577 195389004 -7696528 - LTR16B LTR ERVL -11 453 1 * 1285 227 20 89 chr5 195389004 195389249 -7696283 - MLT1K LTR MaLR -67 521 319 2369 80 0 10 chr5 195389249 195389549 -7695983 + AluY SINE Alu 1 297 -14 1285 227 20 89 chr5 195389549 195389752 -7695780 - MLT1K LTR MaLR -269 319 104 4167 150 70 6 chr5 195389903 195390690 -7694842 - L1MB1 LINE L1 0 6168 5332 465 262 141 5 chr5 195390734 195390925 -7694607 - MLT1H1 LTR MaLR -2 553 337 380 204 37 37 chr5 195391069 195391177 -7694355 - MLT1K LTR MaLR -443 112 5 447 314 17 0 chr5 195391524 195391642 -7693890 + L2 LINE L2 3194 3313 0 309 242 0 0 chr5 195391629 195391695 -7693837 + MIR SINE MIR 92 157 -105 * 275 350 76 38 chr5 195391749 195391948 -7693584 + L2 LINE L2 2791 2981 -332 2076 110 14 10 chr5 195391948 195392239 -7693293 - AluSx SINE Alu -16 296 5 275 350 76 38 chr5 195392239 195392517 -7693015 + L2 LINE L2 2981 3285 -28 316 223 78 58 chr5 195393174 195393277 -7692255 - MIR3 SINE MIR -25 183 79 712 286 0 5 chr5 195393286 195393492 -7692040 - MER96B DNA MER1_type? -180 237 33 363 306 153 39 chr5 195393702 195394088 -7691444 - L2 LINE L2 -2 3270 2841 400 220 50 85 chr5 195396012 195396164 -7689368 - MIR SINE MIR -63 145 39 180 222 56 37 chr5 195396243 195396297 -7689235 + MIR SINE MIR 87 141 -67 515 330 52 30 chr5 195396984 195397214 -7688318 - MIR SINE MIR -1 261 27 468 282 35 63 chr5 195397228 195397402 -7688130 - MIR SINE MIR -56 206 38 251 339 119 55 chr5 195397454 195397690 -7687842 + L2 LINE L2 2940 3190 -82 331 326 0 0 chr5 195397831 195397923 -7687609 + MER5B DNA MER1_type 1 92 -86 227 231 28 65 chr5 195398200 195398308 -7687224 + MLT1K LTR MaLR 462 565 -23 27 73 0 0 chr5 195398360 195398415 -7687117 + AT_rich Low_complexity Low_complexity 1 55 0 198 0 0 0 chr5 195398685 195398707 -7686825 + (A)n Simple_repeat Simple_repeat 1 22 0 680 304 40 78 chr5 195399106 195399684 -7685848 + L2 LINE L2 2709 3262 -10 233 276 42 68 chr5 195400664 195400820 -7684712 + MIR SINE MIR 45 192 -68 1321 233 17 43 chr5 195400820 195401106 -7684426 - MLT1C LTR MaLR 0 467 194 2475 90 0 3 chr5 195401106 195401417 -7684115 - AluSq SINE Alu -3 310 1 1321 233 17 43 chr5 195401417 195401551 -7683981 - MLT1C LTR MaLR -273 194 58 655 196 184 6 chr5 195401828 195402007 -7683525 - ORSL DNA AcHobo -50 225 15 639 343 67 3 chr5 195402859 195403156 -7682376 - L2 LINE L2 -445 2869 2554 222 336 43 72 chr5 195403182 195403390 -7682142 - L2 LINE L2 -217 3055 2854 649 267 52 5 chr5 195404443 195404634 -7680898 - MIR SINE MIR -35 227 28 594 241 103 26 chr5 195404688 195404920 -7680612 + Charlie8 DNA MER1_type 26 275 -2142 1354 234 125 0 chr5 195405131 195405482 -7680050 - MLT1D LTR MaLR -1 504 110 375 287 28 9 chr5 195406137 195406245 -7679287 - MIR SINE MIR -118 144 35 2094 88 14 10 chr5 195406724 195407018 -7678514 - AluSc SINE Alu -13 296 2 444 292 46 8 chr5 195407655 195407785 -7677747 - L2 LINE L2 -2 3270 3136 270 342 17 0 chr5 195407960 195408080 -7677452 + MIR SINE MIR 86 207 -55 27 29 0 0 chr5 195408860 195408894 -7676638 + GC_rich Low_complexity Low_complexity 1 34 0 398 85 37 24 chr5 195409880 195409962 -7675570 + GA-rich Low_complexity Low_complexity 1 83 0 2271 156 24 3 chr5 195409966 195410339 -7675193 - MLT1B LTR MaLR -8 382 2 534 272 102 38 chr5 195410734 195410969 -7674563 + MIR SINE MIR 6 255 -7 212 307 50 50 chr5 195411108 195411248 -7674284 + MIR3 SINE MIR 8 147 -61 205 179 0 0 chr5 195411805 195411844 -7673688 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 383 298 116 46 chr5 195411844 195412584 -7672948 - L2 LINE L2 0 3313 2414 252 154 0 0 chr5 195413173 195413225 -7672307 + (TG)n Simple_repeat Simple_repeat 1 52 0 357 289 50 0 chr5 195413698 195413819 -7671713 + MIR SINE MIR 46 172 -90 531 239 54 68 chr5 195413858 195414063 -7671469 - MIR SINE MIR 0 262 61 558 233 208 0 chr5 195414479 195414638 -7670894 + MER63A DNA MER1_type 12 203 -7 414 134 0 0 chr5 195414735 195414802 -7670730 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 321 302 8 48 chr5 195414952 195415078 -7670454 + L1MC4a LINE L1 5973 6093 -1715 468 138 9 37 chr5 195415415 195415524 -7670008 + GA-rich Low_complexity Low_complexity 3 108 0 421 305 176 28 chr5 195415572 195416214 -7669318 - L1MC4a LINE L1 -1817 5991 5255 319 257 185 64 chr5 195416250 195416515 -7669017 - L1MC4a LINE L1 -944 5202 4906 241 321 181 5 chr5 195416686 195416901 -7668631 - L1MC4a LINE L1 -1369 4777 4525 396 103 0 0 chr5 195418023 195418081 -7667451 + (TCCC)n Simple_repeat Simple_repeat 1 58 0 192 349 116 12 chr5 195419087 195419173 -7666359 - MIR SINE MIR -73 135 41 780 163 11 11 chr5 195419373 195419551 -7665981 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 412 267 97 21 chr5 195420120 195420271 -7665261 + MIR SINE MIR 3 162 -63 260 311 53 15 chr5 195421243 195421375 -7664157 + LTR33 LTR ERVL 384 520 -1 1118 162 110 9 chr5 195421454 195421815 -7663717 - LTR47B LTR ERVL 0 443 3 473 99 165 22 chr5 195421927 195422018 -7663514 - Charlie5 DNA MER1_type 0 2623 2520 2431 98 13 49 chr5 195423258 195423647 -7661885 - THE1C LTR MaLR 0 375 1 2788 74 3 0 chr5 195424120 195424472 -7661060 + L1PA6 LINE L1 5797 6149 -5 212 403 50 0 chr5 195424923 195425042 -7660490 + L2 LINE L2 3125 3249 -23 295 288 49 18 chr5 195425218 195425381 -7660151 + MER112 DNA MER1_type 90 257 -3 2186 84 0 7 chr5 195425381 195425679 -7659853 - AluSg SINE Alu -14 296 1 2356 68 7 0 chr5 195425703 195426011 -7659521 - AluY SINE Alu -1 310 1 412 338 36 49 chr5 195427347 195427572 -7657960 - MIR SINE MIR -28 234 13 439 320 52 88 chr5 195428441 195428907 -7656625 + L2 LINE L2 2807 3255 -17 668 236 148 11 chr5 195429021 195429203 -7656329 + MIR SINE MIR 10 216 -46 492 216 249 37 chr5 195429257 195429526 -7656006 - MLT1J2 LTR MaLR -89 361 36 1912 132 0 26 chr5 195429853 195430164 -7655368 + AluJo SINE Alu 1 303 -9 198 0 0 0 chr5 195430205 195430227 -7655305 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 260 317 49 28 chr5 195431692 195431834 -7653698 - L2 LINE L2 -1 3312 3168 243 0 0 0 chr5 195431853 195431880 -7653652 + (CA)n Simple_repeat Simple_repeat 2 28 0 202 340 120 38 chr5 195431997 195432206 -7653326 - L2 LINE L2 -339 2975 2750 447 319 44 62 chr5 195432230 195432456 -7653076 + MIR SINE MIR 33 254 -8 294 208 28 42 chr5 195432664 195432736 -7652796 - MIR3 SINE MIR 0 208 138 795 120 0 0 chr5 195432752 195432860 -7652672 + AluJo SINE Alu 28 135 -177 360 261 90 0 chr5 195433312 195433423 -7652109 - MIR3 SINE MIR -76 132 12 215 337 119 20 chr5 195433856 195434108 -7651424 - L2 LINE L2 -81 3191 2915 4423 190 28 15 chr5 195434114 195435195 -7650337 + L1MB7 LINE L1 5093 6184 0 198 0 0 0 chr5 195435223 195435245 -7650287 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 400 238 266 21 chr5 195435334 195435477 -7650055 + MIR SINE MIR 84 261 -1 914 143 18 0 chr5 195436126 195436294 -7649238 + (ATGGTG)n Simple_repeat Simple_repeat 1 171 0 563 246 8 0 chr5 195436315 195436445 -7649087 - MIR SINE MIR -1 261 131 336 343 102 25 chr5 195436440 195436685 -7648847 + L2 LINE L2 2713 2976 -338 * 964 215 16 0 chr5 195436690 195436876 -7648656 + MER5A DNA MER1_type 1 189 0 423 315 114 52 chr5 195436876 195437184 -7648348 + L2 LINE L2 2973 3299 -14 290 302 0 0 chr5 195437401 195437464 -7648068 - Charlie8 DNA MER1_type -2350 67 5 21 0 0 0 chr5 195437835 195437856 -7647676 + AT_rich Low_complexity Low_complexity 1 21 0 343 259 61 23 chr5 195438657 195438788 -7646744 + L1ME4a LINE L1 5982 6117 -4 1845 163 7 7 chr5 195439949 195440255 -7645277 - AluSx SINE Alu -6 306 1 2062 123 0 7 chr5 195440374 195440676 -7644856 + AluSq SINE Alu 1 300 -13 245 299 26 51 chr5 195440798 195440915 -7644617 + LTR16A LTR ERVL 98 211 -239 455 264 32 58 chr5 195441116 195441271 -7644261 - MIR SINE MIR -64 198 48 201 91 0 30 chr5 195441473 195441506 -7644026 - MIR SINE MIR -13 249 218 1841 112 49 0 chr5 195441520 195441806 -7643726 - AluSx SINE Alu -12 300 1 189 277 170 11 chr5 195441882 195441976 -7643556 - MIR SINE MIR -95 167 59 273 310 34 55 chr5 195442047 195442215 -7643317 - MIR SINE MIR -62 146 3 355 288 174 0 chr5 195442565 195442697 -7642835 - L2 LINE L2 -4 3268 3114 358 217 43 11 chr5 195444489 195444581 -7640951 - L1ME3A LINE L1 0 6170 6076 529 252 128 59 chr5 195444620 195444926 -7640606 + L2 LINE L2 2984 3310 -3 3215 189 33 14 chr5 195444976 195445617 -7639915 + L1MB3 LINE L1 5457 6109 -74 2144 94 0 14 chr5 195445711 195445998 -7639534 + AluSc SINE Alu 1 283 -26 211 211 132 40 chr5 195447093 195447169 -7638363 - MIR3 SINE MIR -21 187 105 193 274 177 16 chr5 195447208 195447270 -7638262 - L2 LINE L2 -15 3298 3227 520 304 46 23 chr5 195447390 195447607 -7637925 - MIR SINE MIR -25 237 16 713 239 54 36 chr5 195447889 195448111 -7637421 - MIR SINE MIR -27 235 10 376 296 21 49 chr5 195448827 195448969 -7636563 - L2 LINE L2 -1 3312 3175 214 226 19 0 chr5 195449061 195449114 -7636418 + (TAA)n Simple_repeat Simple_repeat 3 56 0 634 293 65 117 chr5 195449705 195450320 -7635212 + L1M4 LINE L1 2512 3094 -3052 303 28 0 0 chr5 195450350 195450386 -7635146 + (TA)n Simple_repeat Simple_repeat 2 37 0 1613 197 127 62 chr5 195450541 195451044 -7634488 - MLT1F LTR MaLR -6 536 1 264 344 56 55 chr5 195451734 195452139 -7633393 + L2 LINE L2 2619 3033 -239 960 149 0 0 chr5 195452503 195452677 -7632855 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 276 30 0 0 chr5 195453373 195453406 -7632126 + (TG)n Simple_repeat Simple_repeat 1 33 0 2009 171 45 5 chr5 195453445 195453824 -7631708 - MLT2D LTR ERVL -20 394 1 243 354 20 62 chr5 195453829 195454024 -7631508 + L2 LINE L2 2994 3180 -92 675 275 28 6 chr5 195454148 195454326 -7631206 + MLT1G1 LTR MaLR 43 224 -371 2344 67 0 6 chr5 195454326 195454639 -7630893 - AluY SINE Alu 0 311 1 1184 35 0 7 chr5 195454639 195454782 -7630750 - AluY SINE Alu -167 144 3 803 237 120 8 chr5 195454785 195455077 -7630455 + MLT1G1 LTR MaLR 220 593 -2 449 272 193 25 chr5 195455511 195455713 -7629819 - MIR SINE MIR -14 248 13 268 208 59 99 chr5 195455890 195455991 -7629541 - MER5C DNA MER1_type -200 124 28 231 173 0 0 chr5 195457090 195457142 -7628390 + T-rich Low_complexity Low_complexity 1 52 0 2106 108 17 0 chr5 195457933 195458221 -7627311 + AluSq SINE Alu 1 293 -20 354 312 0 0 chr5 195458395 195458488 -7627044 + L1MDb LINE L1 10 102 -6307 1942 202 25 12 chr5 195458490 195458852 -7626680 + MLT2D LTR ERVL 7 376 -38 345 24 0 0 chr5 195458852 195458894 -7626638 + (CA)n Simple_repeat Simple_repeat 2 43 0 1942 202 25 12 chr5 195458894 195458932 -7626600 + MLT2D LTR ERVL 376 412 -2 4383 218 55 71 chr5 195458932 195459918 -7625614 + L1MDb LINE L1 101 1101 -5305 2286 128 0 0 chr5 195459918 195460231 -7625301 + AluSq SINE Alu 1 313 0 4383 218 55 71 chr5 195460231 195461637 -7623895 + L1MDb LINE L1 1101 2576 -3830 201 147 0 0 chr5 195461977 195462011 -7623521 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 361 329 109 0 chr5 195462489 195462626 -7622906 - L2 LINE L2 0 3272 3121 358 317 25 0 chr5 195463549 195463669 -7621863 + MER94 DNA DNA 1 123 -11 2563 113 57 2 chr5 195463982 195464388 -7621144 - L1MB7 LINE L1 -19 6165 5738 226 326 105 11 chr5 195466926 195467107 -7618425 - L1ME2 LINE L1 -215 5949 5752 1344 164 40 4 chr5 195467658 195467908 -7617624 + L1MA8 LINE L1 5915 6173 -118 979 134 13 13 chr5 195467911 195468060 -7617472 + AluSg/x SINE Alu 130 278 -34 546 186 28 21 chr5 195468060 195468205 -7617327 + L1MA8 LINE L1 6146 6291 0 824 161 8 0 chr5 195468350 195468480 -7617052 - FLAM_C SINE Alu -12 131 1 439 167 65 7 chr5 195469038 195469127 -7616405 + MLT1C LTR MaLR 385 467 0 338 102 0 0 chr5 195469215 195469264 -7616268 + MER53 DNA DNA 3 51 -138 393 250 33 20 chr5 195469865 195470017 -7615515 + L1MC4a LINE L1 5751 5904 -1904 338 349 8 38 chr5 195470288 195470366 -7615166 + MIR SINE MIR 20 94 -168 2082 147 98 40 chr5 195470366 195470843 -7614689 + MLT1D LTR MaLR 1 505 0 338 349 8 38 chr5 195470843 195470896 -7614636 + MIR SINE MIR 94 147 -115 2969 180 12 5 chr5 195472049 195472616 -7612916 + L1MB3 LINE L1 5598 6168 -15 409 211 11 0 chr5 195472693 195472788 -7612744 + MER5B DNA MER1_type 3 98 -80 2418 111 76 25 chr5 195472826 195473233 -7612299 - MSTA LTR MaLR 0 428 1 305 274 126 0 chr5 195473416 195473511 -7612021 - MER94 DNA DNA -24 110 4 327 277 46 54 chr5 195473516 195473646 -7611886 - MIR3 SINE MIR -75 133 5 270 371 131 4 chr5 195473813 195474050 -7611482 - L2 LINE L2 -21 3251 2985 195 232 71 0 chr5 195474302 195474358 -7611174 + MIR SINE MIR 93 152 -110 24 0 0 0 chr5 195474880 195474904 -7610628 + AT_rich Low_complexity Low_complexity 1 24 0 331 279 13 0 chr5 195474935 195475014 -7610518 - L1ME3A LINE L1 -63 6107 6028 2214 112 13 16 chr5 195475273 195475586 -7609946 - AluSx SINE Alu 0 312 1 344 337 47 2 chr5 195475661 195475913 -7609619 - L1ME3A LINE L1 -703 5463 5309 1728 120 11 129 chr5 195476040 195476389 -7609143 - AluYb8 SINE Alu 0 308 1 305 175 12 50 chr5 195476389 195476469 -7609063 + L2 LINE L2 2148 2224 -1090 1231 221 70 42 chr5 195476469 195476857 -7608675 + MLT1B LTR MaLR 1 396 0 1236 274 91 50 chr5 195476870 195477899 -7607633 + L2 LINE L2 2233 3313 0 524 304 116 37 chr5 195478290 195478852 -7606680 - L1M4 LINE L1 -2902 3244 2639 2186 119 0 0 chr5 195479256 195479551 -7605981 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 195480311 195480332 -7605200 + AT_rich Low_complexity Low_complexity 1 21 0 1786 142 0 0 chr5 195480458 195480712 -7604820 + AluSx SINE Alu 34 287 -25 207 0 0 0 chr5 195480717 195480740 -7604792 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1901 128 11 4 chr5 195480917 195481191 -7604341 - AluSq SINE Alu -10 303 28 354 304 55 83 chr5 195481312 195481565 -7603967 + MLT1L LTR MaLR 37 282 -333 581 159 44 9 chr5 195481680 195481793 -7603739 - L2 LINE L2 0 3313 3197 402 301 202 0 chr5 195482358 195482551 -7602981 + MIR SINE MIR 29 260 -2 211 0 88 0 chr5 195483253 195483287 -7602245 + T-rich Low_complexity Low_complexity 2 38 0 425 264 0 27 chr5 195484934 195485044 -7600488 - MIR SINE MIR -133 129 23 256 256 13 77 chr5 195485274 195485352 -7600180 + Charlie8 DNA MER1_type 1 73 -2344 285 29 0 0 chr5 195485522 195485556 -7599976 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1140 159 20 15 chr5 195486051 195486252 -7599280 - MER63A DNA MER1_type -5 205 4 409 297 32 0 chr5 195486549 195486704 -7598828 - LTR16A LTR ERVL -22 428 269 345 299 75 0 chr5 195486703 195486837 -7598695 + Charlie8 DNA MER1_type 19 162 -2255 * 517 290 26 0 chr5 195486859 195487014 -7598518 + MIR SINE MIR 78 236 -26 381 314 26 6 chr5 195487565 195487721 -7597811 + MIR SINE MIR 78 236 -26 189 0 0 0 chr5 195488197 195488218 -7597314 + (TGG)n Simple_repeat Simple_repeat 1 21 0 263 180 40 0 chr5 195488697 195488747 -7596785 - L2 LINE L2 0 3313 3262 583 134 0 0 chr5 195489377 195489459 -7596073 - AluJ/FLAM SINE Alu -213 99 18 3076 156 22 2 chr5 195489492 195490030 -7595502 - L1MC1 LINE L1 -17 6316 5768 847 207 30 50 chr5 195490132 195490253 -7595279 - L1MC1 LINE L1 -545 5788 5671 2358 99 3 0 chr5 195490253 195490557 -7594975 - AluY SINE Alu -5 306 2 847 207 30 50 chr5 195490557 195490633 -7594899 - L1MC1 LINE L1 -662 5671 5595 583 224 105 0 chr5 195490894 195491037 -7594495 - MER5A DNA MER1_type -18 171 14 2182 100 14 0 chr5 195491367 195491656 -7593876 + AluSp SINE Alu 1 293 -20 245 206 0 41 chr5 195491658 195491731 -7593801 + G-rich Low_complexity Low_complexity 3 72 0 * 735 145 22 22 chr5 195491727 195491906 -7593626 + GA-rich Low_complexity Low_complexity 2 180 0 283 245 127 110 chr5 195493055 195493177 -7592355 - MIR SINE MIR -13 249 131 1764 166 7 7 chr5 195493177 195493484 -7592048 + AluSx SINE Alu 1 307 -5 283 245 127 110 chr5 195493484 195493598 -7591934 - MIR SINE MIR -131 131 9 442 293 40 0 chr5 195494069 195494257 -7591275 + MIR3 SINE MIR 7 204 -58 290 340 84 5 chr5 195494236 195494451 -7591081 - MIR SINE MIR 0 262 31 * 2071 107 10 13 chr5 195494683 195494981 -7590551 - AluSg SINE Alu -13 297 1 222 345 0 12 chr5 195495157 195495241 -7590291 + MIR SINE MIR 168 250 -12 195 234 21 0 chr5 195495474 195495521 -7590011 - MIR3 SINE MIR -12 196 149 240 252 81 24 chr5 195495522 195495645 -7589887 + MER113 DNA MER1_type? 6 135 -386 23 0 0 0 chr5 195496916 195496939 -7588593 + AT_rich Low_complexity Low_complexity 1 23 0 321 178 27 0 chr5 195497008 195497081 -7588451 - MIR SINE MIR -102 160 86 586 252 6 12 chr5 195497538 195497698 -7587834 + MIR SINE MIR 5 161 -47 251 323 24 16 chr5 195498267 195498391 -7587141 - MIR SINE MIR -63 145 21 321 259 210 20 chr5 195498464 195498875 -7586657 - LTR33 LTR ERVL 0 521 23 477 50 0 0 chr5 195499170 195499230 -7586302 + (CTCA)n Simple_repeat Simple_repeat 4 63 0 874 260 23 16 chr5 195499365 195499623 -7585909 - MIR SINE MIR -1 261 2 299 279 106 50 chr5 195499623 195499802 -7585730 + Charlie8 DNA MER1_type 1 189 -2228 2301 97 0 26 chr5 195500855 195501165 -7584367 - AluSx SINE Alu -10 302 1 3366 180 49 11 chr5 195501946 195502081 -7583451 + MER63C DNA MER1_type 255 383 -677 1755 184 35 32 chr5 195502081 195502428 -7583104 + MER7A DNA MER2_type 1 346 0 3366 180 49 11 chr5 195502428 195502943 -7582589 + MER63C DNA MER1_type 383 930 0 519 276 18 12 chr5 195503027 195503197 -7582335 + MIR SINE MIR 20 190 -72 665 180 8 31 chr5 195503581 195503709 -7581823 + FLAM_C SINE Alu 2 126 -17 229 203 14 58 chr5 195503773 195503842 -7581690 + L2 LINE L2 3194 3259 -13 315 272 33 0 chr5 195504518 195504610 -7580922 - MIR SINE MIR -64 198 104 245 318 133 26 chr5 195504638 195504833 -7580699 - MIR SINE MIR -33 229 14 409 127 13 0 chr5 195505677 195505756 -7579776 + L1PB1 LINE L1 6072 6151 0 40 21 0 0 chr5 195505756 195505803 -7579729 + AT_rich Low_complexity Low_complexity 1 47 0 188 232 232 24 chr5 195505934 195506016 -7579516 + MIR3 SINE MIR 13 111 -97 745 191 0 0 chr5 195506055 195506191 -7579341 - MIR SINE MIR -91 171 36 330 210 51 45 chr5 195506403 195506560 -7578972 - L1ME4a LINE L1 -30 6091 5934 970 289 55 25 chr5 195506639 195507127 -7578405 - L1ME4a LINE L1 -9 6112 5610 1905 154 0 33 chr5 195507151 195507457 -7578075 + AluJb SINE Alu 1 296 -16 26772 132 14 23 chr5 195509303 195512458 -7573074 + L1PA8A LINE L1 2 3184 -3262 2382 89 0 19 chr5 195512458 195512772 -7572760 + AluY SINE Alu 3 310 -1 26772 132 14 23 chr5 195512772 195516058 -7569474 + L1PA8A LINE L1 3184 6446 0 184 306 0 0 chr5 195516197 195516246 -7569286 - MIR SINE MIR -63 145 97 2209 133 0 0 chr5 195516962 195517271 -7568261 - AluSq SINE Alu 0 313 5 284 301 93 83 chr5 195517456 195517672 -7567860 + L2 LINE L2 3046 3263 -9 1488 190 135 49 chr5 195519048 195519479 -7566053 + MLT1D LTR MaLR 21 488 -17 218 232 107 0 chr5 195520407 195520463 -7565069 + MIR3 SINE MIR 106 167 -41 249 33 0 0 chr5 195521497 195521527 -7564005 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1053 209 9 4 chr5 195521798 195522028 -7563504 + L1 LINE L1 2634 2864 -3282 1591 178 15 58 chr5 195522035 195522180 -7563352 + AluJo SINE Alu 1 151 -161 2282 126 0 0 chr5 195522180 195522489 -7563043 + AluSx SINE Alu 4 312 0 1591 178 15 58 chr5 195522489 195522669 -7562863 + AluJo SINE Alu 151 312 0 1057 207 5 0 chr5 195522787 195522985 -7562547 + ERVL-C1 LTR ERVL 5558 5756 -8 1386 227 19 51 chr5 195522985 195523395 -7562137 + MLT2C1 LTR ERVL 1 397 0 188 86 29 0 chr5 195523400 195523435 -7562097 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 9678 121 30 18 chr5 195524041 195525551 -7559981 - L1M1 LINE L1 -4775 2790 1263 442 209 12 0 chr5 195526977 195527063 -7558469 - MER5A DNA MER1_type -94 95 9 527 286 23 0 chr5 195527082 195527253 -7558279 - MER5B DNA MER1_type -3 175 1 276 293 107 5 chr5 195527608 195527813 -7557719 + L2 LINE L2 1546 1771 -1543 662 261 39 69 chr5 195528042 195528375 -7557157 + L2 LINE L2 2991 3313 0 1217 146 6 1 chr5 195528687 195531621 -7553911 - ALR/Alpha Satellite centromeric -2 2950 1 2166 116 0 10 chr5 195531763 195532066 -7553466 + AluSx SINE Alu 1 300 -12 480 158 0 0 chr5 195532166 195532248 -7553284 + L1MB1 LINE L1 6082 6163 -5 2268 100 0 29 chr5 195532320 195532630 -7552902 - AluSc SINE Alu -8 301 1 1227 115 6 0 chr5 195532633 195532816 -7552716 + L1MA2 LINE L1 6121 6304 0 654 222 33 71 chr5 195532873 195533085 -7552447 - MER3 DNA MER1_type -5 204 1 513 290 45 5 chr5 195533108 195533329 -7552203 - L2 LINE L2 -249 3064 2835 316 265 54 48 chr5 195533337 195533484 -7552048 + MLT1G1 LTR MaLR 163 310 -285 623 178 0 0 chr5 195533559 195533660 -7551872 + MLT1G1 LTR MaLR 446 546 -49 461 264 29 62 chr5 195534086 195534213 -7551319 - L1ME1 LINE L1 -5 6161 6044 2308 92 3 0 chr5 195534213 195534505 -7551027 + AluSq SINE Alu 1 293 -20 461 264 29 62 chr5 195534505 195534619 -7550913 - L1ME1 LINE L1 -122 6044 5928 472 86 0 0 chr5 195534629 195534699 -7550833 + AluSc SINE Alu 240 309 0 2322 212 70 44 chr5 195534702 195535124 -7550408 - L1ME1 LINE L1 -230 5934 5524 964 194 28 33 chr5 195535124 195535335 -7550197 - MER63A DNA MER1_type 0 210 1 2322 212 70 44 chr5 195535335 195535646 -7549886 - L1ME1 LINE L1 -640 5524 5223 2485 82 0 0 chr5 195535646 195535952 -7549580 - AluY SINE Alu -5 306 1 2322 212 70 44 chr5 195535952 195536566 -7548966 - L1ME1 LINE L1 -941 5223 4448 2321 93 7 0 chr5 195536566 195536866 -7548666 - AluSg SINE Alu 0 310 9 2322 212 70 44 chr5 195536866 195536912 -7548620 - L1ME1 LINE L1 -1716 4448 4405 3760 174 22 55 chr5 195537110 195537229 -7548303 + L1MB2 LINE L1 4498 4619 -1564 2333 112 0 6 chr5 195537229 195537543 -7547989 - AluSx SINE Alu 0 312 1 203 61 30 0 chr5 195537550 195537583 -7547949 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1869 159 0 0 chr5 195537585 195537868 -7547664 - AluJb SINE Alu -29 283 1 3760 174 22 55 chr5 195537868 195538574 -7546958 + L1MB2 LINE L1 4626 5307 -876 1608 192 10 23 chr5 195538574 195538882 -7546650 + AluJo SINE Alu 1 304 -8 3760 174 22 55 chr5 195538882 195539038 -7546494 + L1MB2 LINE L1 5307 5467 -716 8044 14 0 0 chr5 195539038 195540002 -7545530 + L1PA2 LINE L1 5183 6155 0 3679 170 20 6 chr5 195540002 195540686 -7544846 + L1MB2 LINE L1 5476 6169 -2 1915 151 3 7 chr5 195540700 195540992 -7544540 - AluJo SINE Alu -21 291 1 890 192 305 24 chr5 195541078 195541406 -7544126 + MLT1F1 LTR MaLR 140 559 -8 2107 125 3 55 chr5 195541443 195541771 -7543761 + AluSx SINE Alu 1 311 -1 581 105 21 84 chr5 195541777 195541968 -7543564 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 742 117 0 9 chr5 195542265 195542376 -7543156 - AluJb SINE Alu -201 111 2 2206 88 41 3 chr5 195543048 195543343 -7542189 + AluSq SINE Alu 1 306 -7 297 260 124 65 chr5 195543409 195543483 -7542049 + MER5A DNA MER1_type 9 77 -112 1829 164 18 112 chr5 195543483 195543940 -7541592 - MLT2D LTR ERVL 0 414 1 297 260 124 65 chr5 195543940 195544034 -7541498 + MER5A DNA MER1_type 77 187 -2 216 264 35 81 chr5 195545263 195545437 -7540095 + (TGGG)n Simple_repeat Simple_repeat 3 168 0 609 240 136 0 chr5 195547279 195547433 -7538099 + MER45A DNA AcHobo 4 178 0 319 315 16 0 chr5 195547795 195547922 -7537610 - MER103 DNA DNA -20 146 18 512 314 122 8 chr5 195548763 195549177 -7536355 + LTR16C LTR ERVL 1 482 -9 1205 176 51 51 chr5 195549191 195549503 -7536029 - AluJo SINE Alu 0 312 1 187 267 23 35 chr5 195549687 195549773 -7535759 - L2 LINE L2 0 3272 3188 189 0 0 0 chr5 195549957 195549978 -7535554 + (A)n Simple_repeat Simple_repeat 1 21 0 1308 230 24 30 chr5 195550200 195550306 -7535226 + MER110 LTR ERV1 118 223 -268 2132 106 4 0 chr5 195550306 195550581 -7534951 + AluSx SINE Alu 1 276 -36 1308 230 24 30 chr5 195550581 195550804 -7534728 + MER110 LTR ERV1 223 445 -46 330 297 82 31 chr5 195550889 195551115 -7534417 + L2 LINE L2 2782 3016 -256 447 113 0 0 chr5 195551411 195551482 -7534050 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 2208 115 0 13 chr5 195551500 195551804 -7533728 + AluSx SINE Alu 1 300 -12 1533 161 62 72 chr5 195552236 195552540 -7532992 - AluJo SINE Alu -1 311 11 2172 84 45 3 chr5 195552555 195552841 -7532691 - AluSp SINE Alu -15 298 1 329 273 101 0 chr5 195553131 195553174 -7532358 - L1MA10 LINE L1 -9 6325 6283 363 286 82 28 chr5 195553174 195553356 -7532176 - L1ME1 LINE L1 -44 6122 5931 855 128 0 0 chr5 195553389 195553530 -7532002 + (TTCC)n Simple_repeat Simple_repeat 1 141 0 317 120 0 0 chr5 195553530 195553580 -7531952 + Alu SINE Alu 248 297 -5 484 292 28 6 chr5 195554077 195554255 -7531277 - MIR SINE MIR -26 236 55 903 244 83 12 chr5 195554394 195554718 -7530814 + LTR16A1 LTR ERVL 111 457 0 256 198 216 72 chr5 195555565 195555676 -7529856 - L2 LINE L2 -4 3268 3142 208 331 63 75 chr5 195555710 195555964 -7529568 + L2 LINE L2 2935 3185 -87 255 256 73 88 chr5 195555964 195556101 -7529431 - L2 LINE L2 0 3272 3138 233 344 48 16 chr5 195557484 195557609 -7527923 - Charlie8 DNA MER1_type -2221 196 68 2249 117 7 0 chr5 195557694 195558002 -7527530 + AluSg SINE Alu 1 310 0 824 40 0 0 chr5 195559436 195559535 -7525997 + L1PA4 LINE L1 6054 6152 -3 324 256 44 22 chr5 195559756 195559893 -7525639 - MIR SINE MIR -91 171 32 290 269 11 11 chr5 195559944 195560037 -7525495 + MIR SINE MIR 157 249 -13 246 305 102 40 chr5 195560347 195560524 -7525008 - L2 LINE L2 -7 3306 3119 207 293 88 27 chr5 195560570 195560717 -7524815 + L2 LINE L2 2619 2774 -540 2029 89 0 4 chr5 195561233 195561491 -7524041 + AluY SINE Alu 35 291 -20 207 0 0 0 chr5 195561495 195561518 -7524014 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 313 338 88 7 chr5 195561709 195561845 -7523687 - MIR SINE MIR -29 233 87 474 267 110 63 chr5 195561887 195562335 -7523197 - MLT1J LTR MaLR -88 527 3 528 241 41 35 chr5 195562404 195562549 -7522983 + MER63A DNA MER1_type 52 197 -13 266 229 60 0 chr5 195562938 195563021 -7522511 + L1MC4 LINE L1 6613 6700 -1342 1188 178 24 0 chr5 195563046 195563259 -7522273 + MER20 DNA MER1_type 2 219 0 304 315 56 9 chr5 195564316 195564424 -7521108 - L2 LINE L2 -4 3309 3197 358 301 35 9 chr5 195564822 195564935 -7520597 + L2 LINE L2 3197 3312 -1 303 297 141 12 chr5 195565041 195565323 -7520209 - L2 LINE L2 -262 3051 2731 494 302 64 61 chr5 195565383 195565971 -7519561 + MLT1K LTR MaLR 3 579 -36 410 313 80 7 chr5 195568953 195569103 -7516429 - MIR SINE MIR -95 167 7 288 262 47 37 chr5 195569158 195569265 -7516267 - MIR SINE MIR -61 147 40 400 248 15 38 chr5 195569421 195569554 -7515978 + LTR67 LTR ERVL 428 557 0 341 239 194 11 chr5 195569898 195570078 -7515454 - MER113 DNA MER1_type? -304 217 5 1352 111 0 0 chr5 195570905 195571086 -7514446 + AluSg/x SINE Alu 130 310 0 2025 145 21 0 chr5 195572416 195572706 -7512826 + AluJb SINE Alu 1 296 -16 2192 118 0 10 chr5 195572890 195573194 -7512338 + AluSx SINE Alu 1 301 -11 1903 189 121 15 chr5 195573622 195574077 -7511455 + MLT1D LTR MaLR 3 505 0 275 179 75 0 chr5 195576736 195576803 -7508729 + L1ME1 LINE L1 6090 6161 -5 2184 103 0 30 chr5 195576880 195577182 -7508350 + AluSg SINE Alu 1 293 -17 524 187 72 115 chr5 195577187 195577396 -7508136 + L1MC5 LINE L1 7727 7926 -35 2015 84 70 14 chr5 195577397 195577681 -7507851 - AluSq SINE Alu -13 300 1 413 323 106 5 chr5 195577803 195578001 -7507531 - MIR SINE MIR -16 246 29 286 286 84 0 chr5 195578769 195578888 -7506644 + MIR SINE MIR 63 191 -71 284 296 61 0 chr5 195579357 195579455 -7506077 + L2 LINE L2 3168 3271 -1 1647 154 72 14 chr5 195579482 195579761 -7505771 + AluJo SINE Alu 1 295 -17 264 30 0 0 chr5 195579793 195579826 -7505706 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5422 145 18 25 chr5 195579829 195580560 -7504972 - L1PA16 LINE L1 -7 6159 5424 183 42 0 0 chr5 195580560 195580584 -7504948 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1743 116 85 4 chr5 195580584 195580842 -7504690 - AluSg SINE Alu -31 279 1 5422 145 18 25 chr5 195580842 195581150 -7504382 - L1PA16 LINE L1 -740 5426 5126 2287 111 14 0 chr5 195581422 195581719 -7503813 + AluSg SINE Alu 1 301 -9 603 206 10 0 chr5 195581919 195582021 -7503511 - MER81 DNA DNA -11 103 1 498 291 55 20 chr5 195582045 195582084 -7503448 + MIR SINE MIR 57 93 -169 2188 88 0 0 chr5 195582084 195582356 -7503176 - AluSc SINE Alu -9 300 29 498 291 55 20 chr5 195582356 195582515 -7503017 + MIR SINE MIR 93 262 0 783 158 8 0 chr5 195582764 195582891 -7502641 + FLAM_C SINE Alu 1 128 -15 306 0 0 0 chr5 195582891 195582925 -7502607 + (TA)n Simple_repeat Simple_repeat 2 35 0 532 125 0 0 chr5 195582930 195583010 -7502522 - AluJ/FRAM SINE Alu -14 298 219 2431 80 0 19 chr5 195583172 195583485 -7502047 + AluSx SINE Alu 1 307 -5 12493 205 28 31 chr5 195583517 195583847 -7501685 + L1MD3 LINE L1 2077 2407 -3975 186 71 0 0 chr5 195583847 195583875 -7501657 + (CA)n Simple_repeat Simple_repeat 2 29 0 12493 205 28 31 chr5 195583875 195585236 -7500296 + L1MD3 LINE L1 2407 3771 -2611 198 0 0 0 chr5 195585236 195585258 -7500274 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 11269 25 0 1 chr5 195585258 195587319 -7498213 - L1PA3 LINE L1 -13 6142 4086 12493 205 28 31 chr5 195587319 195588958 -7496574 + L1MD3 LINE L1 3769 5408 -974 1002 180 0 0 chr5 195589775 195589953 -7495579 + L1MD3 LINE L1 5411 5588 -794 678 190 86 0 chr5 195589948 195590111 -7495421 - L1 LINE L1 -1002 5144 4968 * 4549 144 55 4 chr5 195590121 195590890 -7494642 + L1MA9 LINE L1 5345 6152 -160 571 117 19 10 chr5 195590899 195591002 -7494530 + GA-rich Low_complexity Low_complexity 1 104 0 447 192 138 0 chr5 195591004 195591068 -7494464 + L1MA9 LINE L1 6159 6213 -99 261 0 0 0 chr5 195591068 195591097 -7494435 + (TG)n Simple_repeat Simple_repeat 2 30 0 447 192 138 0 chr5 195591097 195591162 -7494370 + L1MA9 LINE L1 6213 6306 -6 40 21 0 0 chr5 195591162 195591209 -7494323 + AT_rich Low_complexity Low_complexity 1 47 0 394 319 63 10 chr5 195592233 195592427 -7493105 - MIR SINE MIR -57 205 3 239 245 71 10 chr5 195592911 195593025 -7492507 - MIR SINE MIR -62 146 20 * 287 343 83 9 chr5 195592978 195593194 -7492338 + MIR SINE MIR 26 257 -5 318 319 140 0 chr5 195593203 195593360 -7492172 + MER117 DNA MER1_type 1 179 -18 1562 208 140 20 chr5 195593489 195593940 -7491592 - MLT1D LTR MaLR 0 505 1 1922 137 0 0 chr5 195594159 195594476 -7491056 - AluSq SINE Alu 0 359 43 287 333 133 6 chr5 195594595 195594760 -7490772 - MLT1J2 LTR MaLR -5 445 260 3275 202 52 68 chr5 195595253 195595745 -7489787 + L1MD3 LINE L1 5829 5597 -790 2342 101 7 0 chr5 195595745 195596052 -7489480 + AluSp SINE Alu 1 309 -4 3275 202 52 68 chr5 195596052 195596515 -7489017 + L1MD3 LINE L1 5596 6065 -322 3342 201 14 14 chr5 195596519 195597184 -7488348 + L1MC3 LINE L1 7098 7762 -23 2407 92 0 0 chr5 195597226 195597521 -7488011 + AluSg SINE Alu 3 297 -13 423 0 0 0 chr5 195597811 195597858 -7487674 + (CA)n Simple_repeat Simple_repeat 1 47 0 182 320 0 62 chr5 195598892 195598989 -7486543 - MIR SINE MIR 0 262 172 23 0 0 0 chr5 195599119 195599142 -7486390 + GC_rich Low_complexity Low_complexity 1 23 0 985 179 0 0 chr5 195599659 195599821 -7485711 - FRAM SINE Alu -15 161 1 252 361 42 16 chr5 195600399 195600590 -7484942 + L2 LINE L2 2699 2894 -420 368 276 32 49 chr5 195600745 195600930 -7484602 + L2 LINE L2 3132 3313 0 350 280 9 9 chr5 195601000 195601107 -7484425 - MIR SINE MIR -141 121 15 467 229 94 45 chr5 195602036 195602303 -7483229 + L2 LINE L2 3011 3290 -23 799 264 95 16 chr5 195603372 195603687 -7481845 - MER113 DNA MER1_type? -62 459 120 353 198 94 0 chr5 195603836 195603932 -7481600 + MIR3 SINE MIR 66 170 -38 196 179 0 36 chr5 195604049 195604105 -7481427 + CT-rich Low_complexity Low_complexity 4 57 0 254 250 15 98 chr5 195604690 195604822 -7480710 - Charlie8 DNA MER1_type -2201 216 96 192 329 154 13 chr5 195605073 195605222 -7480310 + L2 LINE L2 3101 3270 -2 238 173 19 19 chr5 195605476 195605528 -7480004 + MER103 DNA DNA 46 97 -69 968 142 13 0 chr5 195605762 195605917 -7479615 - L1PA16 LINE L1 0 6166 6010 195 289 0 0 chr5 195605977 195606029 -7479503 - MIR SINE MIR -108 154 103 4421 138 48 19 chr5 195606047 195606820 -7478712 - L1MB4 LINE L1 -6 6174 5380 2217 142 11 3 chr5 195606820 195607172 -7478360 + THE1A LTR MaLR 1 355 0 12494 79 3 0 chr5 195607172 195608747 -7476785 + THE1A-int LTR MaLR 1 1580 0 2070 157 14 6 chr5 195608748 195609099 -7476433 + THE1A LTR MaLR 2 355 0 1614 194 30 145 chr5 195609106 195609734 -7475798 - L1MB4 LINE L1 -769 5377 4824 594 235 195 9 chr5 195609870 195610091 -7475441 - MIR SINE MIR 0 262 1 963 189 149 0 chr5 195610195 195610396 -7475136 - MER45C DNA AcHobo 0 953 723 910 267 69 19 chr5 195610386 195610709 -7474823 - MER45C DNA AcHobo -552 401 13 * 231 224 0 0 chr5 195610762 195610811 -7474721 - L1 LINE L1 -973 5173 5125 242 203 0 14 chr5 195611956 195612030 -7473502 + GA-rich Low_complexity Low_complexity 2 74 0 487 233 170 27 chr5 195612034 195612257 -7473275 - MIR SINE MIR 0 262 8 210 233 0 0 chr5 195612302 195612345 -7473187 + L2 LINE L2 3262 3304 -9 494 269 52 0 chr5 195614489 195614623 -7470909 - MIR SINE MIR -66 196 56 318 235 88 10 chr5 195615319 195615421 -7470111 - L2 LINE L2 -1 3271 3162 259 277 21 71 chr5 195615617 195615722 -7469810 - L2 LINE L2 -618 2696 2598 2212 107 3 7 chr5 195615722 195616032 -7469500 + AluSx SINE Alu 1 312 0 259 277 21 71 chr5 195616032 195616067 -7469465 - L2 LINE L2 -716 2598 2563 306 335 97 34 chr5 195616126 195616302 -7469230 - MIR SINE MIR -52 210 24 287 285 31 69 chr5 195616448 195616477 -7469055 - MIR SINE MIR -59 149 120 1935 123 10 3 chr5 195616477 195616770 -7468762 - L1PB1 LINE L1 -2 6149 5855 287 285 31 69 chr5 195616770 195616870 -7468662 - MIR SINE MIR -88 120 36 181 194 0 0 chr5 195617014 195617045 -7468487 - L2 LINE L2 -31 3282 3252 204 0 26 53 chr5 195617049 195617087 -7468445 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 190 288 163 0 chr5 195617184 195617264 -7468268 - L2 LINE L2 -247 3025 2933 564 280 64 21 chr5 195617598 195617834 -7467698 - MIR SINE MIR -9 253 8 243 250 125 10 chr5 195618108 195618212 -7467320 - L1MC4 LINE L1 -5 8037 7922 473 263 39 14 chr5 195618357 195618546 -7466986 - L1ME2 LINE L1 0 6166 5974 810 270 57 76 chr5 195619633 195619650 -7465882 - Charlie8 DNA MER1_type -65 276 260 285 29 0 0 chr5 195619650 195619684 -7465848 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 810 270 57 76 chr5 195619684 195620065 -7465467 - Charlie8 DNA MER1_type -81 260 128 2017 142 0 10 chr5 195620065 195620367 -7465165 + AluJb SINE Alu 1 299 -13 810 270 57 76 chr5 195620367 195620479 -7465053 - Charlie8 DNA MER1_type -213 128 15 1002 274 136 16 chr5 195620749 195621184 -7464348 + L1MC4a LINE L1 5348 5834 -1974 300 267 44 73 chr5 195620968 195621241 -7464291 + L1MB4 LINE L1 5619 5883 -297 * 542 219 44 62 chr5 195621258 195621418 -7464114 + MER63 DNA MER1_type 2 784 -52 298 262 56 32 chr5 195621448 195621574 -7463958 + L1MC4a LINE L1 5831 5959 -1849 315 85 0 0 chr5 195621614 195621661 -7463871 + (CA)n Simple_repeat Simple_repeat 2 48 0 190 282 77 45 chr5 195621804 195621960 -7463572 - MER5B DNA MER1_type -17 161 1 282 283 76 28 chr5 195624456 195624601 -7460931 - MIR3 SINE MIR -3 205 54 232 264 104 48 chr5 195624686 195624811 -7460721 - MER5B DNA MER1_type -40 138 7 193 200 0 0 chr5 195625109 195625144 -7460388 - MIR SINE MIR -111 151 117 567 146 0 0 chr5 195625380 195625462 -7460070 + AluJ/FLAM SINE Alu 5 86 -226 1271 224 77 13 chr5 195625605 195625997 -7459535 - L1MB8 LINE L1 0 6178 5762 868 260 29 41 chr5 195626641 195626992 -7458540 + MLT1I LTR MaLR 82 405 -4 2225 109 0 13 chr5 195628054 195628357 -7457175 - AluSx SINE Alu -13 299 1 305 222 37 12 chr5 195629916 195629997 -7455535 - MIR3 SINE MIR -7 201 119 529 261 42 80 chr5 195630285 195630572 -7454960 - Charlie8 DNA MER1_type -2141 276 1 182 250 0 0 chr5 195630573 195630613 -7454919 - MIR SINE MIR -64 144 105 201 74 0 0 chr5 195630672 195630699 -7454833 + (TG)n Simple_repeat Simple_repeat 1 27 0 211 154 31 0 chr5 195630699 195630764 -7454768 + GA-rich Low_complexity Low_complexity 2 68 0 310 192 23 6 chr5 195630782 195630959 -7454573 + GA-rich Low_complexity Low_complexity 1 180 0 314 170 30 0 chr5 195631045 195631150 -7454382 + GA-rich Low_complexity Low_complexity 1 112 -27 189 0 0 0 chr5 195631150 195631171 -7454361 + (TG)n Simple_repeat Simple_repeat 1 21 0 314 170 30 0 chr5 195631171 195631200 -7454332 + GA-rich Low_complexity Low_complexity 112 139 0 263 191 27 0 chr5 195631246 195631393 -7454139 + GA-rich Low_complexity Low_complexity 1 151 0 181 159 32 0 chr5 195631410 195631473 -7454059 + GA-rich Low_complexity Low_complexity 1 65 0 234 0 0 0 chr5 195631579 195631605 -7453927 + (TG)n Simple_repeat Simple_repeat 2 27 0 389 274 73 15 chr5 195631799 195632002 -7453530 - MIR3 SINE MIR -31 177 4 291 333 21 0 chr5 195632392 195632488 -7453044 + L2 LINE L2 3158 3255 -17 325 174 47 0 chr5 195632488 195632574 -7452958 + GA-rich Low_complexity Low_complexity 3 92 0 211 241 0 74 chr5 195632760 195632814 -7452718 + MIR SINE MIR 78 127 -81 1136 225 127 6 chr5 195632820 195633204 -7452328 - MLT1D LTR MaLR 0 467 53 2308 90 7 7 chr5 195633809 195634108 -7451424 + AluSq SINE Alu 1 299 -14 229 211 40 26 chr5 195634171 195634247 -7451285 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 703 313 95 31 chr5 195634296 195634782 -7450750 - L2 LINE L2 -77 3236 2725 1116 273 136 0 chr5 195634888 195635262 -7450270 + LTR16A LTR ERVL 18 442 -8 716 224 67 9 chr5 195635993 195636216 -7449316 + MER33 DNA MER1_type 49 284 -40 307 143 0 0 chr5 195636216 195636265 -7449267 + FLAM SINE Alu 78 126 -7 1918 157 20 0 chr5 195636277 195636571 -7448961 + AluJb SINE Alu 1 300 -12 819 200 28 0 chr5 195636752 195636897 -7448635 + FRAM SINE Alu 15 163 -13 359 111 0 16 chr5 195636897 195636960 -7448572 + (GGA)n Simple_repeat Simple_repeat 1 62 0 447 100 0 14 chr5 195636960 195637030 -7448502 + L1MA5 LINE L1 2949 3017 -3129 * 9885 171 40 7 chr5 195637028 195639532 -7446000 + L1MA5 LINE L1 3387 5976 -324 232 123 137 55 chr5 195639533 195639606 -7445926 + L1MA5 LINE L1 5945 6023 -277 224 163 0 0 chr5 195639619 195639662 -7445870 + MIR3 SINE MIR 150 192 -16 1714 152 0 0 chr5 195639692 195639969 -7445563 + L1MA5 LINE L1 6024 6300 0 2129 115 33 3 chr5 195639979 195640283 -7445249 + AluSq SINE Alu 1 313 0 247 333 0 10 chr5 195640325 195640427 -7445105 + L2 LINE L2 3178 3278 -35 244 209 22 11 chr5 195640432 195640523 -7445009 + (CATA)n Simple_repeat Simple_repeat 1 92 0 224 163 0 0 chr5 195640643 195640686 -7444846 + MIR3 SINE MIR 150 192 -16 2243 113 0 3 chr5 195641334 195641634 -7443898 + AluSg SINE Alu 1 299 -11 1602 287 53 6 chr5 195642444 195642949 -7442583 + Zaphod DNA AcHobo 156 684 -3347 2657 36 0 3 chr5 195643002 195643306 -7442226 + AluY SINE Alu 1 303 -8 1791 190 18 0 chr5 195643306 195643638 -7441894 + L1MB3 LINE L1 5805 6142 -41 1981 149 13 0 chr5 195643638 195643998 -7441534 + AluSq SINE Alu 1 364 0 32 43 0 0 chr5 195644037 195644083 -7441449 + AT_rich Low_complexity Low_complexity 1 46 0 368 157 26 89 chr5 195644114 195644305 -7441227 + Zaphod DNA AcHobo 796 974 -3057 351 262 58 0 chr5 195644289 195644392 -7441140 + Zaphod DNA AcHobo 3908 4016 -15 * 275 330 26 71 chr5 195644460 195644727 -7440805 + L2 LINE L2 2932 3186 -86 555 236 8 0 chr5 195645135 195645262 -7440270 - MER94 DNA DNA -1 133 6 594 228 0 0 chr5 195645480 195645729 -7439803 + CT-rich Low_complexity Low_complexity 1 249 0 1737 188 0 16 chr5 195645784 195646087 -7439445 - AluJo SINE Alu -14 298 1 190 176 0 98 chr5 195647197 195647248 -7438284 - MIR SINE MIR -186 76 31 406 202 42 125 chr5 195647842 195648010 -7437522 - MIR SINE MIR -70 192 39 1082 86 17 6 chr5 195648720 195648894 -7436638 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 392 309 51 35 chr5 195648980 195649236 -7436296 + MIR SINE MIR 3 262 0 5602 168 5 2 chr5 195649242 195650187 -7435345 - L1MC1 LINE L1 0 6333 5386 2004 130 27 17 chr5 195650412 195650713 -7434819 - AluSx SINE Alu -8 304 1 254 321 75 30 chr5 195650776 195650910 -7434622 + L2 LINE L2 3118 3257 -15 361 336 13 13 chr5 195651655 195651804 -7433728 + L1M3c LINE L1 2 150 -5991 2539 219 19 13 chr5 195652367 195652992 -7432540 + L1M3c LINE L1 959 1587 -4554 * 37223 97 10 11 chr5 195652985 195659132 -7426400 + L1PA6 LINE L1 11 6149 -5 2863 148 38 37 chr5 195659140 195659960 -7425572 - MER4-int LTR ERV1 -1750 4961 2797 1581 266 13 19 chr5 195659969 195660432 -7425100 + L1M4c LINE L1 1313 1772 -4612 811 115 0 0 chr5 195660450 195660563 -7424969 - AluSg/x SINE Alu -16 296 184 282 152 0 0 chr5 195660742 195660788 -7424744 - MLT1J LTR MaLR -15 552 507 606 310 91 21 chr5 195661086 195661328 -7424204 + MIR SINE MIR 2 260 -2 312 328 34 8 chr5 195661409 195661528 -7424004 - MIR SINE MIR -116 146 25 496 301 16 44 chr5 195662061 195662119 -7423413 - MIR SINE MIR -54 208 150 591 75 0 12 chr5 195662119 195662199 -7423333 - MADE1 DNA Mariner 0 80 2 496 301 16 44 chr5 195662199 195662323 -7423209 - MIR SINE MIR -112 150 31 408 235 80 90 chr5 195662541 195662731 -7422801 + L2 LINE L2 3111 3300 -13 212 0 36 0 chr5 195662731 195662759 -7422773 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 292 195 16 164 chr5 195663127 195663255 -7422277 - MIR3 SINE MIR -14 194 86 2190 182 45 9 chr5 195663255 195663679 -7421853 + MLT1C LTR MaLR 1 439 -28 1006 165 0 12 chr5 195663676 195663846 -7421686 - MLT1B LTR MaLR -222 168 1 * 718 259 146 14 chr5 195664584 195664796 -7420736 - MIR SINE MIR -10 252 13 436 177 0 137 chr5 195664874 195664918 -7420614 + MER45A DNA AcHobo 71 119 -1462 2181 122 0 0 chr5 195664918 195665230 -7420302 - AluSx SINE Alu 0 312 1 436 177 0 137 chr5 195665230 195665309 -7420223 + MER45A DNA AcHobo 119 177 -1 503 297 46 44 chr5 195665328 195665373 -7420159 - MLT1J LTR MaLR -30 481 438 2656 13 0 0 chr5 195665373 195665673 -7419859 - AluYb8 SINE Alu -18 300 1 503 297 46 44 chr5 195665673 195665995 -7419537 - MLT1J LTR MaLR -73 438 68 808 208 129 20 chr5 195666381 195666583 -7418949 + MER58A DNA MER1_type 1 224 0 377 244 103 64 chr5 195667117 195667273 -7418259 + MIR3 SINE MIR 39 200 -8 297 314 138 19 chr5 195667643 195667802 -7417730 + MIR SINE MIR 12 189 -73 2431 194 42 44 chr5 195667823 195668296 -7417236 - MER119 DNA MER1_type -5 578 105 2031 100 27 3 chr5 195668296 195668597 -7416935 + AluSx SINE Alu 1 308 -4 2431 194 42 44 chr5 195668597 195668695 -7416837 - MER119 DNA MER1_type -478 105 8 300 125 0 0 chr5 195669877 195669925 -7415607 - Alu SINE Alu -3 299 252 182 340 214 0 chr5 195670306 195670465 -7415067 + L2 LINE L2 2552 2744 -570 261 170 32 117 chr5 195670782 195670824 -7414708 + L1ME LINE L1 5562 5593 -528 712 233 0 0 chr5 195670824 195670957 -7414575 + AluJo SINE Alu 1 133 -169 261 170 32 117 chr5 195670957 195671008 -7414524 + L1ME LINE L1 5593 5647 -474 182 311 0 16 chr5 195671673 195671734 -7413798 - L2 LINE L2 -86 3186 3127 548 294 57 36 chr5 195671953 195672201 -7413331 - MIR SINE MIR -3 259 7 2139 113 3 0 chr5 195672232 195672534 -7412998 + AluSq SINE Alu 1 303 -10 831 128 0 35 chr5 195672634 195672775 -7412757 - AluSq/x SINE Alu -176 136 1 35 0 0 0 chr5 195672775 195672810 -7412722 + AT_rich Low_complexity Low_complexity 1 35 0 880 142 50 0 chr5 195672817 195672958 -7412574 + AluJo SINE Alu 132 279 -33 2123 103 0 7 chr5 195674080 195674381 -7411151 + AluSx SINE Alu 3 301 -11 21 0 0 0 chr5 195674624 195674645 -7410887 + AT_rich Low_complexity Low_complexity 1 21 0 1947 111 3 21 chr5 195674648 195674937 -7410595 + AluSq SINE Alu 1 284 -29 674 225 6 0 chr5 195674937 195675110 -7410422 + GA-rich Low_complexity Low_complexity 1 174 0 2308 95 0 0 chr5 195676494 195676800 -7408732 + AluSq SINE Alu 1 306 -7 2218 99 3 3 chr5 195676927 195677231 -7408301 + AluSc SINE Alu 1 304 -5 186 328 0 0 chr5 195677393 195677454 -7408078 + MIR SINE MIR 95 155 -107 215 208 0 42 chr5 195678597 195678645 -7406887 - MER5A DNA MER1_type -83 106 61 975 276 57 43 chr5 195678863 195679233 -7406299 - L2 LINE L2 -11 3302 2928 357 222 179 34 chr5 195679234 195679351 -7406181 - MIR SINE MIR -121 141 8 2234 94 0 7 chr5 195679548 195679857 -7405675 - AluSc SINE Alu -2 307 1 398 206 117 22 chr5 195679894 195680025 -7405507 + MIR SINE MIR 54 192 -68 1724 115 6 87 chr5 195680051 195680372 -7405160 - AluSg SINE Alu -15 295 1 851 264 45 12 chr5 195680372 195680614 -7404918 - MIR SINE MIR 0 262 13 3182 222 51 58 chr5 195680858 195681158 -7404374 + L1MC4 LINE L1 6854 7155 -887 1893 137 9 29 chr5 195681158 195681473 -7404059 + AluSx SINE Alu 1 309 -3 3182 222 51 58 chr5 195681473 195682260 -7403272 + L1MC4 LINE L1 7155 7933 -109 1188 116 79 17 chr5 195682279 195682520 -7403012 - L1MA8 LINE L1 -4 6287 6032 3389 247 43 37 chr5 195682658 195682817 -7402715 - L1M4 LINE L1 -2144 4002 3845 1857 136 4 0 chr5 195682817 195683119 -7402413 - AluSg SINE Alu 0 303 1 3389 247 43 37 chr5 195683119 195684019 -7401513 - L1M4 LINE L1 -2301 3845 2930 1910 97 32 23 chr5 195684019 195684328 -7401204 + AluSx SINE Alu 1 312 0 3389 247 43 37 chr5 195684328 195684569 -7400963 - L1M4 LINE L1 -3216 2930 2692 684 254 22 16 chr5 195684569 195684754 -7400778 + MIR SINE MIR 77 262 0 671 293 71 57 chr5 195684847 195685407 -7400125 + L2 LINE L2 2701 3271 -1 325 249 34 9 chr5 195685425 195685551 -7399981 + MIR SINE MIR 77 208 -54 2149 95 3 7 chr5 195685822 195686126 -7399406 + AluSg1 SINE Alu 1 303 -6 2122 91 3 3 chr5 195686464 195686750 -7398782 + AluSq SINE Alu 23 308 -5 266 252 88 61 chr5 195687728 195687875 -7397657 + MIR3 SINE MIR 9 159 -49 811 271 18 39 chr5 195687887 195687950 -7397582 + Charlie8 DNA MER1_type 12 75 -266 2205 79 0 0 chr5 195687950 195688248 -7397284 - AluSc SINE Alu 0 298 1 811 271 18 39 chr5 195688248 195688463 -7397069 + Charlie8 DNA MER1_type 75 285 -56 2137 116 0 0 chr5 195688504 195688807 -7396725 - AluSq SINE Alu -10 303 1 201 247 101 56 chr5 195688838 195688927 -7396605 - L2 LINE L2 -25 3247 3155 400 270 108 40 chr5 195688939 195689087 -7396445 + MER5A DNA MER1_type 1 158 -31 776 294 54 0 chr5 195689199 195689420 -7396112 - MIR SINE MIR -6 256 24 405 280 23 40 chr5 195690217 195690323 -7395209 + MIR3 SINE MIR 46 152 -56 2401 59 3 3 chr5 195690323 195690628 -7394904 - AluY SINE Alu -6 305 1 405 280 23 40 chr5 195690628 195690679 -7394853 + MIR3 SINE MIR 152 202 -6 229 250 0 0 chr5 195690699 195690743 -7394789 + polypurine Low_complexity Low_complexity 2 45 0 2403 175 7 46 chr5 195691544 195692002 -7393530 + MLT1C LTR MaLR 28 467 0 324 0 0 0 chr5 195692304 195692340 -7393192 + (T)n Simple_repeat Simple_repeat 1 36 0 2598 212 62 19 chr5 195692526 195693091 -7392441 - MLT1E LTR MaLR 0 593 5 810 296 129 6 chr5 195693124 195693489 -7392043 + MLT1L LTR MaLR 104 513 -102 2102 125 0 3 chr5 195693535 195693848 -7391684 - AluSx SINE Alu 0 312 1 289 280 121 0 chr5 195694251 195694383 -7391149 - MIR SINE MIR -6 256 109 311 44 22 0 chr5 195694730 195694775 -7390757 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr5 195694835 195694856 -7390676 + AT_rich Low_complexity Low_complexity 1 21 0 753 286 48 51 chr5 195695057 195695177 -7390355 - L1MC/D LINE L1 -2001 5807 5688 1915 119 13 10 chr5 195695177 195695479 -7390053 - AluSx SINE Alu -2 310 8 753 286 48 51 chr5 195695479 195695770 -7389762 - L1MC/D LINE L1 -2120 5688 5397 615 275 32 16 chr5 195696264 195696453 -7389079 - MIR SINE MIR -52 210 19 608 264 6 31 chr5 195697322 195697485 -7388047 - MIR SINE MIR -48 214 56 233 174 0 72 chr5 195697597 195697666 -7387866 + CT-rich Low_complexity Low_complexity 1 64 0 220 299 13 26 chr5 195698140 195698217 -7387315 + L2 LINE L2 3220 3295 -18 474 240 131 6 chr5 195699368 195699543 -7385989 - MIR SINE MIR -26 236 40 297 174 29 72 chr5 195699693 195699762 -7385770 - MIR SINE MIR -55 153 88 2021 108 27 7 chr5 195700052 195700371 -7385161 + AluSx SINE Alu 1 312 0 2172 92 0 0 chr5 195701014 195701320 -7384212 + AluSg SINE Alu 1 306 0 521 279 166 40 chr5 195702057 195702383 -7383149 - L2 LINE L2 0 3313 2947 306 276 172 9 chr5 195702573 195702689 -7382843 - MIR SINE MIR -79 183 49 611 273 52 67 chr5 195702751 195703095 -7382437 + MER102b DNA MER1_type 1 339 -2 479 299 113 13 chr5 195703261 195703465 -7382067 + MIR SINE MIR 31 250 -12 751 172 0 0 chr5 195703982 195704116 -7381416 + FRAM SINE Alu 41 174 -2 218 266 105 32 chr5 195704771 195704895 -7380637 - MIR SINE MIR -58 150 18 215 312 21 0 chr5 195705589 195705730 -7379802 + (CA)n Simple_repeat Simple_repeat 1 144 0 2056 104 0 45 chr5 195706288 195706633 -7378899 - AluSx SINE Alu 0 312 1 2292 61 40 0 chr5 195706743 195707040 -7378492 - AluY SINE Alu -2 309 1 736 312 137 24 chr5 195707131 195707754 -7377778 - L2 LINE L2 0 3313 2615 2201 41 0 4 chr5 195707756 195708026 -7377506 + AluY SINE Alu 2 270 -41 971 97 0 0 chr5 195708343 195708467 -7377065 + FLAM_C SINE Alu 1 124 -9 320 331 25 8 chr5 195708590 195708711 -7376821 + MIR SINE MIR 125 247 -15 2262 94 3 0 chr5 195708754 195709061 -7376471 - AluSq SINE Alu -5 308 1 1031 68 0 14 chr5 195709202 195709348 -7376184 + (TTTTC)n Simple_repeat Simple_repeat 1 144 0 265 280 130 10 chr5 195709537 195709637 -7375895 - MLT1L LTR MaLR -158 457 346 2173 120 0 0 chr5 195709657 195709965 -7375567 - AluSc SINE Alu -1 308 1 348 248 90 117 chr5 195709966 195710186 -7375346 - MLT1L LTR MaLR -254 361 148 837 196 7 0 chr5 195710186 195710329 -7375203 - MER58B DNA MER1_type 0 341 198 959 167 8 2 chr5 195710393 195710646 -7374886 + AluJb SINE Alu 2 312 0 898 140 21 0 chr5 195711522 195711665 -7373867 - MER5A DNA MER1_type -43 146 1 2609 177 104 14 chr5 195711962 195712482 -7373050 + MLT1F1 LTR MaLR 1 567 0 1009 32 0 0 chr5 195712597 195712720 -7372812 + AluY SINE Alu 181 303 -8 316 294 90 61 chr5 195713917 195714162 -7371370 + MIR SINE MIR 11 262 0 2234 99 0 0 chr5 195714384 195714686 -7370846 - AluY SINE Alu -9 302 1 1186 144 0 0 chr5 195714887 195715068 -7370464 - AluSg/x SINE Alu -5 307 127 2349 97 0 0 chr5 195715410 195715719 -7369813 - AluSg SINE Alu -1 309 1 337 218 35 23 chr5 195715720 195715807 -7369725 - Charlie8 DNA MER1_type -2284 133 46 217 347 102 0 chr5 195715877 195715975 -7369557 + L2 LINE L2 3129 3236 -36 1858 164 0 0 chr5 195716119 195716431 -7369101 - AluSx SINE Alu 0 312 1 1613 167 7 10 chr5 195716458 195716758 -7368774 - AluJo SINE Alu -13 299 1 442 296 13 20 chr5 195717102 195717254 -7368278 - MIR SINE MIR -64 198 48 388 235 136 24 chr5 195717347 195717560 -7367972 + MER113 DNA MER1_type? 38 274 -247 1376 113 0 5 chr5 195717722 195717939 -7367593 + AluSq SINE Alu 89 304 0 293 299 0 21 chr5 195717965 195718062 -7367470 + MER113 DNA MER1_type? 384 478 -43 380 304 55 39 chr5 195718304 195718485 -7367047 - MIR SINE MIR -44 218 35 321 301 48 34 chr5 195718570 195718716 -7366816 - MIR3 SINE MIR -10 198 51 453 274 32 24 chr5 195719167 195719291 -7366241 + MIR SINE MIR 138 262 0 1976 99 3 31 chr5 195719453 195719783 -7365749 - AluSq SINE Alu 0 322 1 299 289 97 9 chr5 195719856 195719970 -7365562 + MIR SINE MIR 32 155 -107 331 232 74 21 chr5 195720202 195720297 -7365235 - L2 LINE L2 0 3313 3214 180 258 11 108 chr5 195720413 195720506 -7365026 + MIR SINE MIR 67 150 -58 415 369 21 0 chr5 195721358 195721499 -7364033 + MIR SINE MIR 1 144 -118 274 235 39 39 chr5 195723389 195723491 -7362041 - L2 LINE L2 -198 3115 3014 184 274 48 0 chr5 195723495 195723557 -7361975 + L2 LINE L2 3249 3313 0 948 215 134 7 chr5 195723834 195724132 -7361400 - Charlie4a DNA MER1_type -2 506 171 1923 181 128 33 chr5 195724134 195724537 -7360995 + MLT1D LTR MaLR 3 366 -139 2122 123 0 0 chr5 195724537 195724845 -7360687 - AluSx SINE Alu -4 308 1 195 42 0 0 chr5 195724848 195724872 -7360660 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1923 181 128 33 chr5 195724872 195724923 -7360609 + MLT1D LTR MaLR 367 505 0 2749 197 34 58 chr5 195724923 195725599 -7359933 + MLT1D-int LTR MaLR 1 660 -711 1209 253 57 100 chr5 195725652 195726162 -7359370 + MLT1D-int LTR MaLR 661 1148 -223 386 267 57 0 chr5 195726279 195726384 -7359148 - MER81 DNA DNA -3 111 1 377 144 93 21 chr5 195726384 195726481 -7359051 - MER58B DNA MER1_type -151 190 87 600 163 0 10 chr5 195726483 195726581 -7358951 - Tigger7 DNA MER2_type 0 2487 2391 1464 193 19 15 chr5 195726583 195726847 -7358685 - Tigger7 DNA MER2_type -2222 265 1 476 193 0 12 chr5 195726854 195726937 -7358595 - MER58B DNA MER1_type -259 82 1 376 244 260 0 chr5 195726937 195727058 -7358474 - MLT1L LTR MaLR -460 155 3 187 217 22 22 chr5 195727259 195727305 -7358227 + MIR SINE MIR 85 130 -78 221 254 0 60 chr5 195729942 195730009 -7355523 + MIR3 SINE MIR 109 171 -37 215 232 0 71 chr5 195731049 195731105 -7354427 - L2 LINE L2 0 3313 3262 1470 137 0 25 chr5 195731222 195731463 -7354069 + AluSx SINE Alu 1 235 -77 448 133 27 0 chr5 195731570 195731645 -7353887 + AluSx SINE Alu 227 303 -7 189 294 111 40 chr5 195731654 195731780 -7353752 + MIR SINE MIR 19 153 -109 505 65 0 0 chr5 195731780 195731842 -7353690 + AluSg/x SINE Alu 155 216 -94 189 346 30 10 chr5 195731991 195732092 -7353440 + MIR SINE MIR 103 205 -57 581 183 51 69 chr5 195732140 195732315 -7353217 - AluSg/x SINE Alu -18 294 123 426 304 134 15 chr5 195732597 195732798 -7352734 - MIR SINE MIR -27 235 11 347 171 37 24 chr5 195733031 195733113 -7352419 + MER53 DNA DNA 8 90 -99 331 286 84 103 chr5 195733542 195733615 -7351917 - L2 LINE L2 -356 2958 2885 2343 77 3 0 chr5 195733615 195733915 -7351617 + AluSp SINE Alu 3 303 -10 331 286 84 103 chr5 195733915 195734103 -7351429 - L2 LINE L2 -429 2885 2702 2018 82 4 0 chr5 195734419 195734688 -7350844 + AluY SINE Alu 1 270 -41 328 259 0 52 chr5 195734902 195735018 -7350514 + MER5C DNA MER1_type 214 323 -1 285 333 21 0 chr5 195735200 195735296 -7350236 + MIR SINE MIR 162 259 -3 295 289 33 0 chr5 195735629 195735719 -7349813 + MIR SINE MIR 120 212 -50 2361 86 0 0 chr5 195735794 195736098 -7349434 + AluY SINE Alu 1 304 -7 320 266 32 0 chr5 195736878 195736972 -7348560 + L2 LINE L2 2941 3037 -276 763 128 30 12 chr5 195736976 195737140 -7348392 + CT-rich Low_complexity Low_complexity 1 167 0 1995 118 6 37 chr5 195737140 195737319 -7348213 - AluSq SINE Alu 0 313 147 1804 100 9 120 chr5 195737319 195737668 -7347864 - AluSg SINE Alu 0 310 1 1995 118 6 37 chr5 195737668 195737811 -7347721 - AluSq SINE Alu -166 147 1 298 214 13 19 chr5 195737869 195738023 -7347509 + (CA)n Simple_repeat Simple_repeat 2 154 0 493 245 167 51 chr5 195738031 195738247 -7347285 + L2 LINE L2 3073 3313 0 189 0 0 0 chr5 195738247 195738268 -7347264 + (TGGG)n Simple_repeat Simple_repeat 3 23 0 717 212 0 0 chr5 195738295 195738560 -7346972 + (TGGG)n Simple_repeat Simple_repeat 1 265 0 284 336 19 0 chr5 195739064 195739168 -7346364 - MIR SINE MIR -70 138 33 324 272 217 22 chr5 195739301 195739481 -7346051 + MIR SINE MIR 28 242 -20 1882 107 42 0 chr5 195739481 195739770 -7345762 + AluJb SINE Alu 1 301 -11 25 0 0 0 chr5 195740324 195740349 -7345183 + AT_rich Low_complexity Low_complexity 1 25 0 2105 109 0 10 chr5 195741480 195741783 -7343749 - AluSq SINE Alu -13 300 1 683 231 39 67 chr5 195741843 195742125 -7343407 - L1MC5 LINE L1 -48 7913 7640 399 176 0 0 chr5 195742246 195742262 -7343270 + MER116 DNA Mariner 7 22 -58 1835 154 3 0 chr5 195742262 195742554 -7342978 + AluSx SINE Alu 1 293 -19 399 176 0 0 chr5 195742554 195742611 -7342921 + MER116 DNA Mariner 21 80 0 347 340 99 41 chr5 195742778 195743196 -7342336 + L2 LINE L2 2628 3084 -188 1521 77 16 0 chr5 195743402 195743596 -7341936 - MER107 DNA MER1_type 0 197 1 2083 119 7 0 chr5 195743859 195744169 -7341363 - AluSx SINE Alu 0 312 1 290 219 95 25 chr5 195744191 195744312 -7341220 + L1P3 LINE L1 5705 5833 -298 26 0 0 0 chr5 195744370 195744396 -7341136 + AT_rich Low_complexity Low_complexity 1 26 0 291 250 162 55 chr5 195744528 195744628 -7340904 - L1ME4a LINE L1 -15 6106 6018 2232 97 0 0 chr5 195744628 195744927 -7340605 - AluY SINE Alu -12 299 1 291 250 162 55 chr5 195744927 195745098 -7340434 - L1ME4a LINE L1 -103 6018 5806 193 235 0 0 chr5 195746207 195746241 -7339291 - L2 LINE L2 -17 3255 3222 618 271 6 18 chr5 195746529 195746695 -7338837 + MER5A DNA MER1_type 26 189 0 381 289 48 59 chr5 195746973 195747111 -7338421 + L1MB1 LINE L1 5476 5613 -508 2088 110 0 7 chr5 195747111 195747403 -7338129 + AluSx SINE Alu 1 290 -22 381 289 48 59 chr5 195747403 195747451 -7338081 + L1MB1 LINE L1 5613 5660 -461 1376 182 0 27 chr5 195747573 195747831 -7337701 + AluJo SINE Alu 1 251 -61 1348 89 0 0 chr5 195748068 195748247 -7337285 - AluSg SINE Alu -131 179 1 2180 96 3 0 chr5 195748637 195748940 -7336592 + AluSx SINE Alu 1 304 -8 2223 88 0 10 chr5 195748952 195749258 -7336274 + AluY SINE Alu 1 303 -8 265 256 12 77 chr5 195749304 195749326 -7336206 - L1MA10 LINE L1 -3 6331 6310 1189 235 76 52 chr5 195749326 195749773 -7335759 - L1ME2 LINE L1 -14 6150 5693 1559 141 86 14 chr5 195749779 195750069 -7335463 + L1MB1 LINE L1 5789 6099 -69 2105 171 22 31 chr5 195750093 195750288 -7335244 + L1MB8 LINE L1 5725 5920 -258 288 0 0 0 chr5 195750288 195750320 -7335212 + (TA)n Simple_repeat Simple_repeat 2 33 0 2105 171 22 31 chr5 195750320 195750580 -7334952 + L1MB8 LINE L1 5920 6176 -2 713 253 87 31 chr5 195750590 195750819 -7334713 - L1ME2 LINE L1 -471 5699 5458 1840 109 53 0 chr5 195750837 195751120 -7334412 + AluSx SINE Alu 1 298 -14 245 242 96 51 chr5 195751259 195751275 -7334257 - L1MA10 LINE L1 -2 6332 6317 2451 202 52 79 chr5 195751275 195751599 -7333933 - L1ME2 LINE L1 -9 6155 5824 2275 80 3 0 chr5 195751599 195751899 -7333633 - AluSx SINE Alu -7 305 5 2451 202 52 79 chr5 195751899 195752605 -7332927 - L1ME2 LINE L1 -340 5824 5157 395 260 21 10 chr5 195752717 195752813 -7332719 - MIR3 SINE MIR -54 154 58 444 252 71 8 chr5 195753714 195753841 -7331691 - MIR3 SINE MIR -62 146 12 1840 96 100 0 chr5 195754328 195754598 -7330934 + AluSx SINE Alu 1 297 -15 211 224 0 0 chr5 195754605 195754654 -7330878 + A-rich Low_complexity Low_complexity 3 51 0 380 229 0 12 chr5 195754823 195754906 -7330626 - MIR SINE MIR -71 191 110 2096 119 0 0 chr5 195755744 195756076 -7329456 - AluSg SINE Alu 0 310 1 431 35 18 0 chr5 195756873 195756930 -7328602 + (CA)n Simple_repeat Simple_repeat 2 59 0 220 212 76 15 chr5 195757273 195757339 -7328193 - MIR SINE MIR -114 148 79 293 291 95 61 chr5 195758223 195758371 -7327161 - MIR SINE MIR -13 249 97 22 0 0 0 chr5 195758442 195758464 -7327068 + AT_rich Low_complexity Low_complexity 1 22 0 248 111 22 0 chr5 195758532 195758577 -7326955 + GA-rich Low_complexity Low_complexity 1 46 0 256 318 120 37 chr5 195758645 195759094 -7326438 - L2 LINE L2 -69 3244 2723 459 289 45 41 chr5 195759327 195759573 -7325959 - MER102b DNA MER1_type -11 330 84 1257 229 76 53 chr5 195759746 195759936 -7325596 - Charlie4a DNA MER1_type -1459 502 318 1666 174 0 10 chr5 195759936 195760240 -7325292 + AluJb SINE Alu 4 304 -8 1257 229 76 53 chr5 195760240 195760318 -7325214 - Charlie4a DNA MER1_type -1643 318 243 2047 104 3 32 chr5 195760318 195760626 -7324906 + AluSp SINE Alu 1 299 -14 1257 229 76 53 chr5 195760626 195760806 -7324726 - Charlie4a DNA MER1_type -1718 243 43 314 333 162 34 chr5 195761150 195761315 -7324217 + MIR SINE MIR 15 212 -50 2193 97 0 19 chr5 195761315 195761626 -7323906 - AluSx SINE Alu -6 306 2 314 333 162 34 chr5 195761626 195761664 -7323868 + MIR SINE MIR 212 244 -18 291 261 14 0 chr5 195761771 195761840 -7323692 + L2 LINE L2 2999 3068 -245 267 258 15 15 chr5 195762323 195762389 -7323143 - Charlie8 DNA MER1_type -1003 1414 1349 790 271 4 45 chr5 195762473 195762717 -7322815 - Charlie8 DNA MER1_type -2182 235 2 425 324 35 52 chr5 195762722 195762929 -7322603 - L2 LINE L2 -522 2792 2590 2207 98 0 3 chr5 195762929 195763224 -7322308 + AluSp SINE Alu 1 294 -19 425 324 35 52 chr5 195763224 195763303 -7322229 - L2 LINE L2 -724 2590 2511 292 286 171 9 chr5 195763322 195763427 -7322105 + L2 LINE L2 3185 3306 -7 186 345 48 12 chr5 195763937 195764021 -7321511 - L2 LINE L2 -1 3271 3185 302 312 65 0 chr5 195764120 195764213 -7321319 - MIR SINE MIR -83 179 81 1646 143 26 4 chr5 195765588 195765853 -7319679 + AluJo SINE Alu 10 280 -32 198 91 0 0 chr5 195765853 195765886 -7319646 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 269 186 0 0 chr5 195767119 195767162 -7318370 - L2 LINE L2 -11 3261 3219 1577 118 51 51 chr5 195767433 195767709 -7317823 - L1PB1 LINE L1 -1 6150 5871 2137 96 0 0 chr5 195767709 195768024 -7317508 + AluSg SINE Alu 1 315 0 1577 118 51 51 chr5 195768024 195768061 -7317471 - L1PB1 LINE L1 -279 5872 5836 468 92 0 0 chr5 195768080 195768145 -7317387 + AluSp/q SINE Alu 238 302 -11 456 224 84 56 chr5 195768340 195768519 -7317013 + MLT1K LTR MaLR 391 574 -14 2385 48 27 0 chr5 195768623 195768918 -7316614 + AluY SINE Alu 1 303 -8 400 307 101 16 chr5 195768947 195769136 -7316396 + MIR SINE MIR 16 220 -42 2330 70 3 3 chr5 195769141 195769440 -7316092 + AluSp SINE Alu 1 299 -14 1008 83 7 21 chr5 195769571 195769716 -7315816 + AluSq/x SINE Alu 1 143 -169 486 98 0 0 chr5 195769716 195769777 -7315755 + Alu SINE Alu 229 289 -21 352 335 119 11 chr5 195769785 195770045 -7315487 - L1MC4a LINE L1 -1883 5925 5638 1664 188 143 29 chr5 195770687 195771140 -7314392 + MLT1D LTR MaLR 1 505 0 441 296 85 58 chr5 195771789 195772410 -7313122 - L1ME4a LINE L1 -81 6040 5403 2190 92 0 0 chr5 195772554 195772848 -7312684 - AluSg1 SINE Alu -15 294 1 473 259 86 7 chr5 195772893 195773032 -7312500 + MIR SINE MIR 1 150 -112 1863 159 0 6 chr5 195773057 195773407 -7312125 - AluJb SINE Alu 0 348 1 250 319 92 43 chr5 195773978 195774174 -7311358 + MIR SINE MIR 10 211 -51 910 230 34 39 chr5 195774353 195774557 -7310975 + MIR SINE MIR 59 261 -1 195 366 35 14 chr5 195774591 195774733 -7310799 + L2 LINE L2 2906 3050 -222 566 270 92 6 chr5 195774756 195774930 -7310602 + MIR SINE MIR 58 246 -16 343 309 55 42 chr5 195774951 195775082 -7310450 + L2 LINE L2 3099 3235 -37 1896 143 0 0 chr5 195775082 195775403 -7310129 - AluJb SINE Alu 0 321 1 343 309 55 42 chr5 195775403 195775435 -7310097 + L2 LINE L2 3235 3265 -7 436 245 108 7 chr5 195775518 195775657 -7309875 + MIR SINE MIR 49 201 -61 1272 64 0 0 chr5 195775661 195775817 -7309715 + AluY SINE Alu 1 156 -155 544 275 64 0 chr5 195776177 195776348 -7309184 - MIR SINE MIR -34 228 47 742 155 7 7 chr5 195776529 195776684 -7308848 + (TG)n Simple_repeat Simple_repeat 1 155 0 2255 99 0 0 chr5 195777211 195777514 -7308018 + AluSc SINE Alu 2 304 -5 25 31 0 0 chr5 195778408 195778440 -7307092 + AT_rich Low_complexity Low_complexity 1 32 0 1768 166 7 0 chr5 195778461 195778757 -7306775 - AluSx SINE Alu -14 298 1 475 159 23 0 chr5 195778791 195778879 -7306653 + L1MA8 LINE L1 6196 6285 -6 624 191 124 49 chr5 195778942 195779047 -7306485 - Charlie4 DNA MER1_type -1681 280 184 2095 101 23 10 chr5 195779047 195779354 -7306178 + AluSp SINE Alu 1 311 -2 624 191 124 49 chr5 195779354 195779473 -7306059 - Charlie4 DNA MER1_type -1777 184 39 384 270 165 0 chr5 195779597 195779712 -7305820 + MIR SINE MIR 41 174 -88 252 252 63 98 chr5 195779743 195779886 -7305646 - MIR SINE MIR -44 218 81 731 188 0 15 chr5 195779957 195780090 -7305442 + FLAM_C SINE Alu 3 133 0 2347 135 33 104 chr5 195780299 195780430 -7305102 - MER44D DNA MER2_type -1882 605 466 5575 48 5 3 chr5 195780430 195781100 -7304432 + L1PA6 LINE L1 5484 6154 0 2347 135 33 104 chr5 195781100 195781558 -7303974 - MER44D DNA MER2_type -2021 466 2 940 301 85 19 chr5 195781698 195782063 -7303469 + MLT1K LTR MaLR 198 586 -2 1138 89 6 13 chr5 195783091 195783248 -7302284 - LTR12 LTR ERV1 -558 156 1 440 196 0 45 chr5 195783336 195783448 -7302084 + L1M4 LINE L1 4715 4821 -1325 496 184 26 19 chr5 195784089 195784243 -7301289 - MIR SINE MIR -44 218 63 396 0 0 0 chr5 195784292 195784336 -7301196 + (TG)n Simple_repeat Simple_repeat 2 45 0 2201 94 0 3 chr5 195784337 195784634 -7300898 - AluSc SINE Alu -13 296 1 1802 121 3 85 chr5 195784946 195785286 -7300246 - AluSx SINE Alu 0 312 1 1418 234 144 28 chr5 195785300 195785724 -7299808 + MLT1J LTR MaLR 37 509 -2 503 292 73 42 chr5 195786194 195786454 -7299078 + MER102a DNA MER1_type 62 329 -1 7219 105 16 14 chr5 195786555 195787923 -7297609 + L1MA2 LINE L1 4937 6304 0 1579 158 0 64 chr5 195787937 195788235 -7297297 + AluJo SINE Alu 3 281 -31 36 0 0 0 chr5 195788251 195788287 -7297245 + AT_rich Low_complexity Low_complexity 1 36 0 673 306 94 19 chr5 195788600 195788973 -7296559 - MLT1I LTR MaLR 0 409 9 1493 165 107 49 chr5 195788978 195789323 -7296209 + MLT1A1 LTR MaLR 1 365 0 188 317 34 108 chr5 195789339 195789718 -7295814 + L2 LINE L2 2815 3165 -107 451 284 173 24 chr5 195789792 195790000 -7295532 - MER102b DNA MER1_type -3 338 100 654 260 96 32 chr5 195790059 195790278 -7295254 + MIR SINE MIR 28 260 -2 287 143 0 18 chr5 195791404 195791460 -7294072 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 624 280 5 10 chr5 195791546 195791753 -7293779 - L1ME4a LINE L1 -210 5911 5706 618 173 37 56 chr5 195791850 195792067 -7293465 + MER106B DNA MER1_type 1 1040 -19 294 211 44 61 chr5 195792620 195792734 -7292798 - MIR SINE MIR -47 215 104 2127 110 3 10 chr5 195792882 195793191 -7292341 - AluSp SINE Alu -6 307 1 244 275 0 14 chr5 195793259 195793328 -7292204 - MIR SINE MIR -155 107 40 366 23 0 0 chr5 195793376 195793419 -7292113 + (CA)n Simple_repeat Simple_repeat 2 44 0 274 302 10 10 chr5 195794588 195794684 -7290848 + L1MC4a LINE L1 5798 5893 -1915 2144 95 0 17 chr5 195794706 195795001 -7290531 - AluSc SINE Alu -13 296 7 278 365 29 36 chr5 195795370 195795507 -7290025 + L2 LINE L2 3159 3294 -19 188 229 42 42 chr5 195795532 195795580 -7289952 - MIR SINE MIR -95 113 66 235 245 66 104 chr5 195795599 195795705 -7289827 - L2 LINE L2 -10 3303 3202 1842 216 25 45 chr5 195795732 195796028 -7289504 + MER110 LTR ERV1 50 335 -156 2271 89 0 10 chr5 195796028 195796330 -7289202 - AluSq SINE Alu -14 299 1 1842 216 25 45 chr5 195796330 195796482 -7289050 + MER110 LTR ERV1 335 489 -2 267 333 58 8 chr5 195796777 195796897 -7288635 - L2 LINE L2 -468 2846 2721 888 258 22 15 chr5 195796897 195797165 -7288367 - LTR37B LTR ERV1 0 468 199 417 280 64 0 chr5 195797213 195797338 -7288194 + LTR16A LTR ERVL 310 442 -8 377 217 130 49 chr5 195797351 195797535 -7287997 - LTR37B LTR ERV1 -255 213 15 1937 109 3 48 chr5 195797536 195797847 -7287685 - AluSx SINE Alu -11 301 5 312 296 73 67 chr5 195798140 195798179 -7287353 + L1ME4a LINE L1 5671 5708 -413 2471 57 0 0 chr5 195798179 195798479 -7287053 - AluY SINE Alu -11 300 1 312 296 73 67 chr5 195798479 195798875 -7286657 + L1ME4a LINE L1 5708 6109 -12 * 1147 183 75 39 chr5 195798868 195799147 -7286385 - L1MB7 LINE L1 0 6420 6132 1400 197 4 8 chr5 195799147 195799411 -7286121 + AluJo SINE Alu 1 263 -49 292 152 0 0 chr5 195799411 195799457 -7286075 + AluJo SINE Alu 240 285 -17 6321 213 48 24 chr5 195799463 195800367 -7285165 - L1MB7 LINE L1 -269 6141 5260 2157 88 17 0 chr5 195800367 195800661 -7284871 - AluSg SINE Alu -11 299 1 6321 213 48 24 chr5 195800661 195801890 -7283642 - L1MB7 LINE L1 -1150 5260 3959 2983 217 93 73 chr5 195801895 195802149 -7283383 - L1MB7 LINE L1 -2829 3553 3305 2069 123 0 3 chr5 195802149 195802449 -7283083 + AluSg SINE Alu 1 299 -11 2983 217 93 73 chr5 195802449 195803960 -7281572 - L1MB7 LINE L1 -3077 3305 1825 1882 147 3 13 chr5 195803960 195804267 -7281265 - AluSx SINE Alu 0 312 9 289 148 11 0 chr5 195804267 195804320 -7281212 - Alu SINE Alu -263 39 1 2983 217 93 73 chr5 195804320 195804891 -7280641 - L1MB7 LINE L1 -4556 1826 1097 183 247 82 52 chr5 195805242 195805339 -7280193 + MIR SINE MIR 82 181 -81 213 294 144 46 chr5 195805395 195805548 -7279984 + MIR SINE MIR 25 192 -70 219 253 126 35 chr5 195805974 195806061 -7279471 - MIR SINE MIR -92 170 76 286 294 59 0 chr5 195806202 195806319 -7279213 - MIR3 SINE MIR -50 158 32 250 305 49 12 chr5 195806422 195806504 -7279028 - MIR SINE MIR -71 191 107 181 262 0 0 chr5 195806769 195806811 -7278721 + MIR SINE MIR 108 149 -113 201 273 18 0 chr5 195807117 195807172 -7278360 - MIR SINE MIR -76 132 77 37 39 0 0 chr5 195807434 195807485 -7278047 + GC_rich Low_complexity Low_complexity 1 51 0 315 274 32 0 chr5 195807831 195807926 -7277606 + MIR SINE MIR 56 153 -109 199 152 0 0 chr5 195808081 195808114 -7277418 - L2 LINE L2 -12 3260 3228 189 273 0 0 chr5 195808114 195808125 -7277407 - MIR SINE MIR -6 256 213 294 282 60 74 chr5 195808318 195808467 -7277065 - MIR SINE MIR -46 216 70 198 0 0 0 chr5 195810758 195810780 -7274752 + (A)n Simple_repeat Simple_repeat 1 22 0 215 252 24 110 chr5 195812168 195812295 -7273237 - MIR SINE MIR -78 184 69 180 0 0 0 chr5 195812931 195812951 -7272581 + (A)n Simple_repeat Simple_repeat 1 20 0 376 71 0 0 chr5 195813358 195813414 -7272118 + L1PA8 LINE L1 6116 6171 -1 288 77 0 0 chr5 195815312 195815351 -7270181 + (TG)n Simple_repeat Simple_repeat 2 40 0 35 41 0 0 chr5 195816176 195816225 -7269307 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr5 195819227 195819250 -7266282 + GC_rich Low_complexity Low_complexity 1 23 0 381 234 148 0 chr5 195819254 195819382 -7266150 - MIR SINE MIR -70 192 46 21 0 0 0 chr5 195820337 195820358 -7265174 + AT_rich Low_complexity Low_complexity 1 21 0 321 341 0 23 chr5 195821299 195821472 -7264060 + T-rich Low_complexity Low_complexity 5 173 0 22 0 0 0 chr5 195822070 195822092 -7263440 + GC_rich Low_complexity Low_complexity 1 22 0 319 342 22 62 chr5 195822257 195822529 -7263003 - MIR SINE MIR 0 262 2 237 323 30 20 chr5 195822593 195822692 -7262840 - MIR SINE MIR -35 227 128 192 309 74 51 chr5 195822790 195822965 -7262567 - MIR SINE MIR -51 211 33 386 282 133 6 chr5 195823173 195823354 -7262178 - MIR SINE MIR -30 232 29 270 0 0 0 chr5 195823395 195823425 -7262107 + (TG)n Simple_repeat Simple_repeat 2 31 0 477 283 101 40 chr5 195824632 195824830 -7260702 - MIR SINE MIR -1 261 52 2135 124 3 29 chr5 195824980 195825294 -7260238 + AluSx SINE Alu 1 306 -6 236 196 54 18 chr5 195825413 195825469 -7260063 - MIR SINE MIR -86 122 65 2141 86 7 27 chr5 195825755 195826056 -7259476 - AluSg SINE Alu -15 295 1 390 274 8 43 chr5 195826401 195826518 -7259014 + L2 LINE L2 3200 3312 -1 2148 89 0 50 chr5 195827212 195827514 -7258018 - AluSg SINE Alu -23 287 1 23 0 0 29 chr5 195828341 195828355 -7257177 + AT_rich Low_complexity Low_complexity 1 14 -19 2282 82 6 19 chr5 195828355 195828670 -7256862 - AluY SINE Alu 0 311 1 23 0 0 29 chr5 195828670 195828689 -7256843 + AT_rich Low_complexity Low_complexity 14 33 0 2277 66 0 0 chr5 195828764 195829035 -7256497 - AluY SINE Alu -7 304 34 22 0 0 0 chr5 195829141 195829163 -7256369 + GC_rich Low_complexity Low_complexity 1 22 0 1445 180 15 0 chr5 195829301 195829568 -7255964 + L1PA16 LINE L1 5894 6164 -2 471 113 0 0 chr5 195829621 195829692 -7255840 + (TCCC)n Simple_repeat Simple_repeat 3 73 0 568 109 27 18 chr5 195829800 195829910 -7255622 + CT-rich Low_complexity Low_complexity 4 114 0 1947 171 33 60 chr5 195829912 195830363 -7255169 - L1MB3 LINE L1 -84 6099 5661 1652 188 0 43 chr5 195830384 195830687 -7254845 + AluJb SINE Alu 1 290 -22 440 303 90 6 chr5 195831047 195831225 -7254307 + MIR SINE MIR 4 196 -66 1445 163 59 116 chr5 195831645 195832032 -7253500 - MLT1A1 LTR MaLR 0 365 1 444 300 24 29 chr5 195832834 195833004 -7252528 - MIR3 SINE MIR -8 200 32 1850 147 30 20 chr5 195833260 195833560 -7251972 - AluJo SINE Alu -9 303 1 342 216 148 11 chr5 195833574 195833662 -7251870 + MIR SINE MIR 111 210 -52 453 252 30 30 chr5 195833796 195833927 -7251605 + MIR3 SINE MIR 13 143 -65 258 282 250 0 chr5 195833964 195834088 -7251444 - L2 LINE L2 0 3313 3159 3129 234 61 52 chr5 195834202 195835472 -7250060 - L1MC5 LINE L1 -8 7953 6673 796 249 5 21 chr5 195835942 195836131 -7249401 - MIR SINE MIR -74 188 3 429 239 81 62 chr5 195836302 195836464 -7249068 + MIR SINE MIR 94 262 0 495 282 45 6 chr5 195836488 195836644 -7248888 - MIR SINE MIR -57 205 44 216 0 0 0 chr5 195837339 195837363 -7248169 + (A)n Simple_repeat Simple_repeat 1 24 0 26 50 0 0 chr5 195837429 195837469 -7248063 + AT_rich Low_complexity Low_complexity 1 40 0 24 77 0 0 chr5 195837591 195837643 -7247889 + GC_rich Low_complexity Low_complexity 1 52 0 26 50 0 0 chr5 195837920 195837960 -7247572 + GC_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr5 195838112 195838136 -7247396 + GC_rich Low_complexity Low_complexity 1 24 0 1582 120 83 91 chr5 195838623 195838891 -7246641 - Tigger3(Golem) DNA MER2_type 0 3028 2759 183 42 0 0 chr5 195838891 195838915 -7246617 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1582 120 83 91 chr5 195838915 195838997 -7246535 - Tigger3(Golem) DNA MER2_type -269 2759 1 228 254 74 98 chr5 195839796 195839918 -7245614 - MIR SINE MIR -82 180 62 300 53 0 0 chr5 195839936 195839974 -7245558 + (TG)n Simple_repeat Simple_repeat 2 39 0 217 270 79 0 chr5 195839980 195840043 -7245489 - MER5A DNA MER1_type -38 151 84 285 238 95 12 chr5 195840656 195840740 -7244792 + MIR SINE MIR 15 105 -157 4394 161 34 29 chr5 195840740 195841070 -7244462 - L1MB5 LINE L1 0 6174 5847 2304 111 0 3 chr5 195841070 195841376 -7244156 - AluSx SINE Alu -7 305 1 4394 161 34 29 chr5 195841376 195841984 -7243548 - L1MB5 LINE L1 -327 5847 5231 2047 101 4 11 chr5 195841985 195842263 -7243269 + AluSx SINE Alu 1 276 -36 299 151 0 0 chr5 195842284 195842337 -7243195 + Alu SINE Alu 246 298 -2 544 197 95 34 chr5 195842382 195842529 -7243003 + MIR SINE MIR 103 258 -4 239 306 48 24 chr5 195842582 195842706 -7242826 - L1ME LINE L1 -256 5865 5739 265 169 17 17 chr5 195842945 195843004 -7242528 + MLT1F LTR MaLR 4 62 -480 2483 90 0 0 chr5 195843035 195843336 -7242196 - AluSx SINE Alu -8 304 4 207 0 0 0 chr5 195843541 195843564 -7241968 + (T)n Simple_repeat Simple_repeat 1 23 0 195 333 0 0 chr5 195843671 195843722 -7241810 + L2 LINE L2 3248 3298 -15 231 36 0 0 chr5 195843724 195843752 -7241780 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 241 246 0 31 chr5 195843862 195843927 -7241605 + MIR SINE MIR 100 162 -100 368 219 6 138 chr5 195844035 195844195 -7241337 + MIR SINE MIR 74 212 -50 272 328 6 76 chr5 195844240 195844335 -7241197 + MIR SINE MIR 4 83 -179 2224 134 0 6 chr5 195844335 195844649 -7240883 - AluSx SINE Alu 0 312 1 272 328 6 76 chr5 195844649 195844724 -7240808 + MIR SINE MIR 83 162 -100 2213 121 3 0 chr5 195846040 195846338 -7239194 - AluSx SINE Alu -13 299 1 1132 259 69 30 chr5 195846362 195846767 -7238765 + L2 LINE L2 2809 3229 -84 2106 113 28 0 chr5 195846828 195847119 -7238413 - AluY SINE Alu -10 301 3 210 368 0 0 chr5 195847126 195847202 -7238330 + L2 LINE L2 3234 3309 -4 422 273 22 80 chr5 195847217 195847460 -7238072 - L1MC4a LINE L1 -302 5819 5609 2410 92 3 0 chr5 195847460 195847766 -7237766 - AluSp SINE Alu -6 307 1 422 273 22 80 chr5 195847766 195847851 -7237681 - L1MC4a LINE L1 -512 5609 5521 866 66 15 15 chr5 195847926 195848063 -7237469 + (TTTC)n Simple_repeat Simple_repeat 4 140 0 1747 158 10 47 chr5 195848087 195848384 -7237148 - AluJb SINE Alu -20 292 7 721 220 0 0 chr5 195848737 195848855 -7236677 + AluJo SINE Alu 8 125 -187 1265 182 9 13 chr5 195848865 195849090 -7236442 - AluJo SINE Alu -2 310 87 473 0 18 0 chr5 195849127 195849184 -7236348 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2217 106 0 26 chr5 195849184 195849486 -7236046 - AluSx SINE Alu -18 294 1 993 194 6 0 chr5 195849500 195849660 -7235872 + AluJo SINE Alu 132 292 -20 2133 120 21 3 chr5 195850351 195850475 -7235057 + AluSx SINE Alu 1 121 -191 225 0 0 0 chr5 195850475 195850500 -7235032 + (CA)n Simple_repeat Simple_repeat 2 26 0 2133 120 21 3 chr5 195850500 195850666 -7234866 + AluSx SINE Alu 121 296 -16 374 266 21 0 chr5 195850872 195850966 -7234566 + MIR SINE MIR 41 136 -72 2375 87 3 23 chr5 195851161 195851471 -7234061 - AluY SINE Alu -7 304 1 792 181 0 8 chr5 195851561 195851694 -7233838 - FLAM_C SINE Alu -11 132 1 447 314 82 29 chr5 195851939 195852219 -7233313 - L2 LINE L2 -349 2965 2671 567 284 70 94 chr5 195852230 195852450 -7233082 + L2 LINE L2 2517 2741 -572 1721 180 3 43 chr5 195852450 195852773 -7232759 + AluJb SINE Alu 1 310 -2 567 284 70 94 chr5 195852773 195853378 -7232154 + L2 LINE L2 2741 3313 0 180 203 51 68 chr5 195853509 195853568 -7231964 + MIR SINE MIR 95 152 -110 290 336 19 19 chr5 195854137 195854244 -7231288 + MIR SINE MIR 31 137 -71 25 51 0 0 chr5 195854920 195854959 -7230573 + AT_rich Low_complexity Low_complexity 1 39 0 426 238 92 49 chr5 195855308 195855472 -7230060 - MIR SINE MIR -12 250 80 2387 106 0 0 chr5 195856558 195856860 -7228672 + AluSx SINE Alu 1 302 -10 1054 131 26 0 chr5 195857172 195857325 -7228207 - FRAM SINE Alu 0 40 1 26 0 0 0 chr5 195857332 195857358 -7228174 + AT_rich Low_complexity Low_complexity 1 26 0 21762 162 33 38 chr5 195907361 195913040 -7172492 - L1PA8A LINE L1 -615 5831 125 1648 105 63 118 chr5 195913040 195913355 -7172177 - AluSq SINE Alu -15 298 1 21762 162 33 38 chr5 195913355 195913480 -7172052 - L1PA8A LINE L1 -6321 125 1 1920 143 17 58 chr5 195913478 195913890 -7171642 - L1M4c LINE L1 -5286 1098 704 * 210 37 0 0 chr5 195914037 195914064 -7171468 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 238 227 0 0 chr5 195914067 195914111 -7171421 - L1M4c LINE L1 -5893 491 448 26 50 0 0 chr5 195914943 195914983 -7170549 + AT_rich Low_complexity Low_complexity 1 40 0 500 152 0 0 chr5 195915288 195915367 -7170165 + AluSx SINE Alu 1 79 -234 2599 70 219 120 chr5 195915369 195915884 -7169648 - LTR12 LTR ERV1 -148 566 1 1801 105 0 12 chr5 195915884 195916131 -7169401 + AluSx SINE Alu 63 306 -6 246 62 0 0 chr5 195916990 195917022 -7168510 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 364 74 19 0 chr5 195917024 195917078 -7168454 - Alu SINE Alu 0 301 247 318 50 0 0 chr5 195917178 195917218 -7168314 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 650 307 121 9 chr5 195917221 195917644 -7167888 + L2 LINE L2 1493 1962 -1352 372 298 18 9 chr5 195917644 195917758 -7167774 + MER94 DNA DNA 1 115 -19 195 284 30 15 chr5 195917810 195917877 -7167655 + L2 LINE L2 3210 3277 -36 282 56 0 0 chr5 195918559 195918595 -7166937 + (CA)n Simple_repeat Simple_repeat 2 37 0 25 0 0 0 chr5 195918780 195918805 -7166727 + AT_rich Low_complexity Low_complexity 1 25 0 276 261 22 33 chr5 195919446 195919538 -7165994 - MIR SINE MIR -140 122 32 272 298 124 13 chr5 195920113 195920338 -7165194 - L1ME4a LINE L1 -195 5926 5677 1788 102 20 0 chr5 195920391 195920635 -7164897 - L1PA10 LINE L1 -8 6160 5912 290 330 0 10 chr5 195921893 195921990 -7163542 + MIR SINE MIR 2 97 -165 319 186 0 0 chr5 195921990 195922049 -7163483 + MIR SINE MIR 204 262 0 201 200 67 0 chr5 195922405 195922465 -7163067 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 289 316 45 15 chr5 195922859 195922992 -7162540 - MIR SINE MIR -77 185 49 2328 75 0 10 chr5 195923198 195923514 -7162018 - AluY SINE Alu 0 313 1 1502 182 3 56 chr5 195923527 195923829 -7161703 - AluJb SINE Alu -26 286 1 870 200 24 33 chr5 195924163 195924373 -7161159 + MLT1D LTR MaLR 1 208 -297 301 230 108 0 chr5 195924376 195924450 -7161082 + MER5A DNA MER1_type 24 105 -84 429 190 74 29 chr5 195924542 195924699 -7160833 - Charlie8 DNA MER1_type -2212 205 2 2289 108 0 3 chr5 195924965 195925271 -7160261 - AluSg SINE Alu -2 308 4 1284 198 164 31 chr5 195925673 195925918 -7159614 - LTR64 LTR ERVK 0 558 258 2054 93 0 0 chr5 195925918 195926188 -7159344 + AluY SINE Alu 39 308 -3 1284 198 164 31 chr5 195926188 195926265 -7159267 - LTR64 LTR ERVK -300 258 193 7365 113 176 70 chr5 195926265 195927798 -7157734 + pTR5 LTR ERV1 743 2438 0 1021 179 10 0 chr5 195927800 195927995 -7157537 - LTR64 LTR ERVK -361 197 1 6639 152 44 49 chr5 195928510 195929996 -7155536 - L1MA9 LINE L1 0 6312 4859 261 0 0 0 chr5 195929996 195930025 -7155507 + (TG)n Simple_repeat Simple_repeat 2 30 0 6639 152 44 49 chr5 195930025 195930988 -7154544 - L1MA9 LINE L1 -1453 4859 3893 417 125 113 0 chr5 195930976 195931056 -7154476 - L1 LINE L1 -1153 4993 4905 * 7604 32 8 0 chr5 195931189 195932742 -7152790 + L1PA4 LINE L1 4598 6154 -1 373 197 61 0 chr5 195934605 195934752 -7150780 + (TA)n Simple_repeat Simple_repeat 2 157 0 6012 85 11 6 chr5 195934761 195936026 -7149506 - L1PA13 LINE L1 -1 6162 4873 325 275 8 53 chr5 195936049 195936180 -7149352 - L2 LINE L2 -9 3304 3180 1634 202 56 24 chr5 195936198 195936648 -7148884 - L1M4 LINE L1 -1673 4473 4010 428 246 18 35 chr5 195936693 195936807 -7148725 + L1PA12 LINE L1 684 795 -6786 282 247 151 0 chr5 195936857 195936950 -7148582 + L1M3 LINE L1 4809 4915 -1231 1656 180 67 6 chr5 195937013 195937358 -7148174 + L1M3 LINE L1 5364 5729 -454 1124 224 4 18 chr5 195937359 195937640 -7147892 + L1PA15 LINE L1 4919 5195 -951 1089 124 0 0 chr5 195937641 195937786 -7147746 + LTR8 LTR ERV1 547 691 0 11659 127 37 37 chr5 195937786 195938942 -7146590 + HUERS-P1 LTR ERV1 1 1156 -5107 2282 79 48 0 chr5 195938942 195939233 -7146299 - AluSp SINE Alu -8 305 1 11659 127 37 37 chr5 195939233 195939262 -7146270 + HUERS-P1 LTR ERV1 1156 1184 -5079 258 32 0 0 chr5 195939262 195939293 -7146239 + (TC)n Simple_repeat Simple_repeat 2 32 0 11659 127 37 37 chr5 195939293 195940063 -7145469 + HUERS-P1 LTR ERV1 1183 1957 -4306 2968 172 33 35 chr5 195940104 195940296 -7145236 + L1PA15 LINE L1 5586 5777 -388 2367 99 0 3 chr5 195940296 195940600 -7144932 + AluY SINE Alu 1 303 -8 2968 172 33 35 chr5 195940600 195940987 -7144545 + L1PA15 LINE L1 5777 6164 -1 1554 147 3 107 chr5 195941091 195941418 -7144114 - MER1B DNA MER1_type -1 338 46 282 172 70 70 chr5 195941441 195941569 -7143963 - L1MEc LINE L1 -4124 2272 2145 412 219 16 0 chr5 195941590 195941713 -7143819 + (TA)n Simple_repeat Simple_repeat 1 125 0 3872 275 72 38 chr5 195941715 195943735 -7141797 - L1MEc LINE L1 -4267 2129 40 494 203 73 145 chr5 195943751 195943964 -7141568 - L1MEc LINE L1 -4775 1621 1451 2205 130 0 7 chr5 195943964 195944271 -7141261 - AluSx SINE Alu -7 305 1 494 203 73 145 chr5 195944271 195944470 -7141062 - L1MEc LINE L1 -4945 1451 1239 291 294 5 75 chr5 195944944 195945131 -7140401 - L1MC/D LINE L1 -1941 5867 5694 28 0 0 0 chr5 195945431 195945459 -7140073 + AT_rich Low_complexity Low_complexity 1 28 0 372 348 90 10 chr5 195945570 195945880 -7139652 - L1MC/D LINE L1 -2138 5670 5336 4860 124 18 52 chr5 195947114 195948554 -7136978 + pTR5 LTR ERV1 743 2438 0 1725 82 0 0 chr5 195948675 195948883 -7136649 + AluY SINE Alu 22 229 -82 23478 195 19 16 chr5 195949592 195955602 -7129930 + L1PA12 LINE L1 24 6859 -743 186 211 19 58 chr5 195955652 195955704 -7129828 + MIR SINE MIR 18 67 -141 686 191 23 0 chr5 195956373 195956504 -7129028 + MER94 DNA DNA 1 134 0 2219 108 0 3 chr5 195956824 195957130 -7128402 - AluSx SINE Alu -7 305 1 1556 203 24 47 chr5 195957760 195957778 -7127754 - L1ME3 LINE L1 -1 6161 6144 1299 151 43 146 chr5 195957778 195958195 -7127337 + MLT1A2 LTR MaLR 1 374 0 1556 203 24 47 chr5 195958195 195958246 -7127286 - L1ME3 LINE L1 -18 6144 6093 2354 94 3 0 chr5 195958246 195958543 -7126989 - AluSx SINE Alu -14 298 1 1556 203 24 47 chr5 195958543 195958879 -7126653 - L1ME3 LINE L1 -69 6093 5766 639 226 126 25 chr5 195959212 195959411 -7126121 - MIR SINE MIR -43 219 1 412 219 27 0 chr5 195960096 195960169 -7125363 - FLAM_A SINE Alu -50 83 9 421 273 14 14 chr5 195960173 195960316 -7125216 + (CA)n Simple_repeat Simple_repeat 1 143 0 207 0 0 0 chr5 195960519 195960542 -7124990 + (A)n Simple_repeat Simple_repeat 1 23 0 1323 247 48 75 chr5 195960552 195961071 -7124461 + MER77 LTR ERV1 54 558 -47 592 158 123 0 chr5 195961847 195961961 -7123571 + MLT1A2 LTR MaLR 1 128 -246 8048 151 10 12 chr5 195961962 195963264 -7122268 + L1M1 LINE L1 23 1321 -6244 814 200 7 7 chr5 195964503 195964658 -7120874 + MER5A DNA MER1_type 2 156 -33 1654 172 11 4 chr5 195965388 195965661 -7119871 + AluJo SINE Alu 1 275 -37 477 289 145 34 chr5 195965735 195966114 -7119418 + L1ME LINE L1 5283 5703 -418 180 111 0 0 chr5 195966408 195966435 -7119097 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 779 198 36 16 chr5 195966473 195966689 -7118843 - L1MB8 LINE L1 -215 5963 5771 1664 155 84 3 chr5 195967953 195968237 -7117295 - AluJb SINE Alu -5 307 1 2275 64 7 20 chr5 195968265 195968562 -7116970 + AluY SINE Alu 1 293 -18 857 156 0 15 chr5 195968682 195968817 -7116715 + AluJb SINE Alu 1 133 -179 902 138 0 14 chr5 195969778 195969916 -7115616 + AluJb SINE Alu 121 256 -56 2053 123 0 14 chr5 195970430 195970722 -7114810 + AluJb SINE Alu 9 296 -16 281 272 29 37 chr5 195970751 195970887 -7114645 - L1ME4a LINE L1 -201 5920 5786 217 320 39 13 chr5 195971409 195971487 -7114045 + MIR SINE MIR 20 99 -109 2462 77 3 0 chr5 195971798 195972098 -7113434 - AluY SINE Alu -10 301 1 1834 139 47 30 chr5 195972856 195973157 -7112375 + AluJb SINE Alu 1 306 -6 2041 159 0 0 chr5 195973283 195973585 -7111947 - AluSx SINE Alu -10 302 1 297 111 12 48 chr5 195973679 195973741 -7111791 - L1P1 LINE L1 -364 5757 5709 * 301 211 35 53 chr5 195973737 195973851 -7111681 + L1ME LINE L1 5711 5822 -299 2496 57 0 7 chr5 195973860 195974159 -7111373 + AluY SINE Alu 2 298 -13 320 238 129 65 chr5 195974286 195974462 -7111070 + MIR3 SINE MIR 18 201 -7 1707 150 49 7 chr5 195974695 195974981 -7110551 - AluJb SINE Alu -14 298 1 2062 115 37 3 chr5 195975050 195975345 -7110187 - AluSx SINE Alu -7 305 1 1941 148 0 7 chr5 195975445 195975748 -7109784 - AluSq SINE Alu -11 302 2 623 102 8 25 chr5 195975817 195975935 -7109597 + (TTTC)n Simple_repeat Simple_repeat 1 116 0 1478 83 102 0 chr5 195975939 195976144 -7109388 - AluY SINE Alu -2 309 84 2237 92 0 30 chr5 195976298 195976603 -7108929 + AluSx SINE Alu 17 312 0 5056 90 15 12 chr5 195976614 195977348 -7108184 + L1PA11 LINE L1 5439 6174 0 347 128 64 16 chr5 195977659 195977784 -7107748 + (TA)n Simple_repeat Simple_repeat 2 132 0 374 314 111 6 chr5 195977922 195978094 -7107438 - MLT1K LTR MaLR -2 586 397 213 286 65 0 chr5 195978135 195978212 -7107320 + L2 LINE L2 2950 3031 -241 776 149 15 8 chr5 195978250 195978384 -7107148 - MLT1A1 LTR MaLR -2 363 229 1076 105 0 0 chr5 195978410 195978566 -7106966 + AluSg/x SINE Alu 150 305 0 795 221 42 37 chr5 195978615 195978805 -7106727 - MLT1A1 LTR MaLR -171 194 4 942 279 90 25 chr5 195978932 195979297 -7106235 + MLT1J2 LTR MaLR 1 389 -61 593 223 121 106 chr5 195979336 195979777 -7105755 - MLT1H LTR MaLR -2 540 66 260 189 38 0 chr5 195979824 195979877 -7105655 + MLT1J2 LTR MaLR 393 447 -3 386 239 84 0 chr5 195979891 195980046 -7105486 + MER113 DNA MER1_type? 1 168 -353 220 289 0 0 chr5 195980752 195980804 -7104728 + CT-rich Low_complexity Low_complexity 4 55 0 322 263 88 23 chr5 195981429 195981600 -7103932 - MER5A DNA MER1_type 0 189 8 292 250 58 19 chr5 195982019 195982123 -7103409 + MIR SINE MIR 33 140 -68 186 296 92 20 chr5 195982952 195983050 -7102482 - L2 LINE L2 -32 3240 3136 444 266 28 0 chr5 195983552 195983695 -7101837 + L2 LINE L2 2896 3042 -271 2256 101 7 0 chr5 195983989 195984285 -7101247 + AluSp SINE Alu 5 302 -11 254 277 0 0 chr5 195984633 195984698 -7100834 - MIR SINE MIR -66 142 78 227 267 40 30 chr5 195984824 195984925 -7100607 + Charlie7 DNA MER1_type 1 102 -2510 2230 107 3 13 chr5 195985212 195985520 -7100012 - AluSq SINE Alu -8 305 1 189 333 49 16 chr5 195986126 195986249 -7099283 - L2 LINE L2 -467 2847 2721 326 244 11 22 chr5 195986525 195986615 -7098917 - L2 LINE L2 -1006 2308 2220 557 254 0 0 chr5 195986697 195986811 -7098721 + MER63 DNA MER1_type 673 786 -276 391 266 101 17 chr5 195987711 195987919 -7097613 + MIR SINE MIR 12 242 -20 313 270 155 58 chr5 195988282 195988454 -7097078 - L1ME4a LINE L1 -38 6083 5929 2134 106 3 10 chr5 195988454 195988746 -7096786 - AluSg SINE Alu -20 290 1 313 270 155 58 chr5 195988746 195988821 -7096711 - L1ME4a LINE L1 -192 5929 5863 1162 42 0 7 chr5 195988821 195989014 -7096518 + L1PA2 LINE L1 6011 6155 0 313 270 155 58 chr5 195989014 195989268 -7096264 - L1ME4a LINE L1 -258 5863 5532 208 210 32 32 chr5 195989893 195989955 -7095577 + GA-rich Low_complexity Low_complexity 5 66 0 1323 237 32 46 chr5 195990439 195990811 -7094721 - MLT1B LTR MaLR -11 379 13 773 187 0 29 chr5 195990891 195991030 -7094502 + FLAM_C SINE Alu 3 137 -6 377 390 57 19 chr5 195991043 195991415 -7094117 + HAL1 LINE L1 1369 1754 -753 449 203 0 8 chr5 195991569 195991692 -7093840 + (TG)n Simple_repeat Simple_repeat 2 123 0 514 261 96 13 chr5 195991718 195991875 -7093657 + LTR41 LTR ERVL 3 172 -601 353 208 0 0 chr5 195992064 195992136 -7093396 + LTR41 LTR ERVL 587 658 -115 6224 109 4 7 chr5 195992142 195993052 -7092480 + L1PA14 LINE L1 5254 6161 0 241 238 98 70 chr5 195993071 195993214 -7092318 + LTR41 LTR ERVL 627 773 0 231 226 0 0 chr5 195993731 195993784 -7091748 + L1MC4 LINE L1 7926 7978 -64 1313 96 0 0 chr5 195994120 195994287 -7091245 - AluSg/x SINE Alu -14 296 130 227 370 78 33 chr5 195994312 195994644 -7090888 + L2 LINE L2 2837 3183 -89 435 240 24 24 chr5 195994705 195994830 -7090702 - MIR SINE MIR -115 147 23 260 309 12 0 chr5 195994848 195994932 -7090600 + L2 LINE L2 3187 3271 -1 203 336 26 35 chr5 195995710 195995823 -7089709 + MIR SINE MIR 46 157 -105 264 274 41 0 chr5 195995831 195995904 -7089628 - MIR SINE MIR -103 159 84 2446 73 0 3 chr5 195995918 195996218 -7089314 + AluSc SINE Alu 1 299 -10 2485 53 3 0 chr5 195996456 195996755 -7088777 + AluY SINE Alu 1 300 -11 518 114 11 0 chr5 195997343 195997431 -7088101 + (TCCA)n Simple_repeat Simple_repeat 4 92 0 515 207 24 79 chr5 195997438 195997602 -7087930 - L2 LINE L2 0 3313 3159 220 331 154 0 chr5 195997754 195997929 -7087603 - L2 LINE L2 -372 2942 2741 2083 103 0 24 chr5 195998951 195999265 -7086267 - AluSx SINE Alu 0 307 1 372 256 43 26 chr5 196000049 196000166 -7085366 - MIR SINE MIR -114 148 30 1614 224 28 17 chr5 196000585 196000946 -7084586 - MER110 LTR ERV1 0 491 127 1473 135 42 8 chr5 196000965 196001224 -7084308 - L1MB3 LINE L1 0 6183 5916 272 319 0 0 chr5 196001226 196001298 -7084234 + MER110 LTR ERV1 15 86 -405 674 149 99 0 chr5 196002180 196002301 -7083231 - FLAM_C SINE Alu 0 133 1 808 200 12 0 chr5 196002304 196002464 -7083068 + MER20 DNA MER1_type 57 218 -1 451 209 95 68 chr5 196002553 196002701 -7082831 - MIR SINE MIR -71 191 40 782 266 55 34 chr5 196002882 196003175 -7082357 + MER110 LTR ERV1 188 486 -5 354 98 0 146 chr5 196003458 196003500 -7082032 + MER41A LTR ERV1 400 426 -128 2453 71 7 0 chr5 196003500 196003794 -7081738 - AluSg SINE Alu -14 296 1 354 98 0 146 chr5 196003794 196003833 -7081699 + MER41A LTR ERV1 426 469 -85 1807 93 4 4 chr5 196003921 196003960 -7081572 + L1PA7 LINE L1 5575 5613 -541 857 112 6 37 chr5 196003960 196004121 -7081411 - L1MA8 LINE L1 -3 6288 6133 1807 93 4 4 chr5 196004121 196004343 -7081189 + L1PA7 LINE L1 5613 5835 -319 2886 99 15 0 chr5 196004343 196004741 -7080791 + L1PA7 LINE L1 5745 6154 0 22 0 0 0 chr5 196004742 196004764 -7080768 + AT_rich Low_complexity Low_complexity 1 22 0 5022 144 17 42 chr5 196005109 196005954 -7079578 - L1MA8 LINE L1 -151 6140 5335 2282 100 0 3 chr5 196005954 196006253 -7079279 - AluSg SINE Alu -12 298 1 5022 144 17 42 chr5 196006253 196006818 -7078714 - L1MA8 LINE L1 -956 5335 4758 2696 129 18 16 chr5 196006832 196007280 -7078252 - L1MA6 LINE L1 0 6300 5852 505 289 87 19 chr5 196007453 196007661 -7077871 - Charlie8 DNA MER1_type -2195 222 1 231 276 0 0 chr5 196008290 196008348 -7077184 + L2 LINE L2 2992 3049 -223 1142 272 46 49 chr5 196008569 196008691 -7076841 + MLT1G LTR MaLR 1 122 -433 2402 91 0 0 chr5 196008691 196008989 -7076543 + AluSx SINE Alu 1 298 -14 1142 272 46 49 chr5 196008989 196009187 -7076345 + MLT1G LTR MaLR 122 319 -236 180 0 0 0 chr5 196009187 196009207 -7076325 + (GA)n Simple_repeat Simple_repeat 1 20 0 1142 272 46 49 chr5 196009207 196009426 -7076106 + MLT1G LTR MaLR 319 555 0 427 315 66 10 chr5 196009582 196009779 -7075753 + MLT1G-int LTR MaLR 325 532 -839 4245 138 12 6 chr5 196010460 196011142 -7074390 - L1PA15 LINE L1 0 6816 6131 16770 212 16 13 chr5 196011148 196015830 -7069702 - L1PA15 LINE L1 -910 5887 1185 571 226 81 111 chr5 196015868 196016165 -7069367 + MLT1G-int LTR MaLR 1084 1371 0 756 271 55 37 chr5 196016173 196016682 -7068850 + MLT1G LTR MaLR 10 542 0 2120 89 68 0 chr5 196016762 196017042 -7068490 + AluSp SINE Alu 4 302 -11 657 272 31 39 chr5 196017780 196018132 -7067400 + L1ME LINE L1 5165 5522 -642 326 276 26 77 chr5 196018165 196018268 -7067264 + L1ME LINE L1 5514 5608 -554 1152 279 99 31 chr5 196018268 196018752 -7066780 + LTR33 LTR ERVL 1 517 -4 326 276 26 77 chr5 196018752 196018804 -7066728 + L1ME LINE L1 5608 5661 -501 1355 181 26 36 chr5 196018835 196019138 -7066394 - MER33 DNA MER1_type -23 301 2 1890 133 0 53 chr5 196019309 196019629 -7065903 - AluSx SINE Alu 0 304 1 1786 48 5 0 chr5 196019813 196020023 -7065509 - L1PA4 LINE L1 -8 6147 5937 2832 109 0 6 chr5 196020225 196020591 -7064941 - THE1B LTR MaLR 0 364 1 198 0 0 0 chr5 196021700 196021722 -7063810 + (T)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr5 196021849 196021870 -7063662 + (A)n Simple_repeat Simple_repeat 1 21 0 871 139 47 17 chr5 196021984 196022156 -7063376 - MER53 DNA DNA -12 177 1 854 263 21 17 chr5 196022206 196022446 -7063086 + MIR SINE MIR 20 260 -2 25 31 0 0 chr5 196022990 196023022 -7062510 + AT_rich Low_complexity Low_complexity 1 32 0 265 290 57 0 chr5 196023234 196023358 -7062174 - L1MC4a LINE L1 -1901 5907 5777 289 176 118 39 chr5 196023467 196023569 -7061963 + L1M4 LINE L1 2923 3032 -3114 * 4847 220 84 83 chr5 196023542 196024038 -7061494 + L1M4 LINE L1 3331 3825 -2321 849 146 0 23 chr5 196024038 196024168 -7061364 - FLAM_C SINE Alu -16 127 1 4847 220 84 83 chr5 196024168 196025510 -7060022 + L1M4 LINE L1 3825 5300 -846 619 163 53 0 chr5 196025500 196025619 -7059913 + L1MB7 LINE L1 6043 6168 -3 * 287 336 14 34 chr5 196026978 196027124 -7058408 + MLT1K LTR MaLR 155 297 -291 233 310 228 22 chr5 196027196 196027380 -7058152 - MIR SINE MIR -24 238 17 181 325 36 36 chr5 196028211 196028294 -7057238 - MIR SINE MIR -63 199 117 1131 223 73 11 chr5 196028308 196028582 -7056950 - MLT1C LTR MaLR 0 467 177 527 113 43 17 chr5 196028600 196028715 -7056817 + CT-rich Low_complexity Low_complexity 1 118 0 585 228 101 21 chr5 196028717 196028744 -7056788 - MLT1C LTR MaLR -186 204 181 1697 179 0 7 chr5 196028744 196029034 -7056498 - AluJo SINE Alu -24 288 1 585 228 101 21 chr5 196029034 196029195 -7056337 - MLT1C LTR MaLR -209 181 1 486 280 89 10 chr5 196029234 196029432 -7056100 + MIR SINE MIR 35 246 -16 2503 74 3 6 chr5 196029478 196029790 -7055742 + AluY SINE Alu 1 311 0 388 350 12 12 chr5 196030002 196030162 -7055370 + L3b LINE CR1 1209 1368 -215 986 261 128 15 chr5 196030381 196030772 -7054760 - MLT1J2 LTR MaLR -10 440 6 274 218 0 0 chr5 196030976 196031031 -7054501 - LTR16C LTR ERVL -1 490 436 877 208 51 35 chr5 196031163 196031418 -7054114 + LTR16C LTR ERVL 231 489 -2 564 303 62 62 chr5 196031793 196032116 -7053416 + L2 LINE L2 2991 3313 0 474 198 16 7 chr5 196032206 196032298 -7053234 + MLT1B LTR MaLR 1 89 -301 1101 218 116 31 chr5 196032313 196032606 -7052926 - L1MA9 LINE L1 -8 6304 5987 1344 221 57 0 chr5 196032606 196032887 -7052645 + MLT1B LTR MaLR 89 385 -5 188 349 32 0 chr5 196033838 196033901 -7051631 - MIR3 SINE MIR -3 205 141 463 305 61 33 chr5 196033929 196034142 -7051390 + MIR SINE MIR 3 221 -41 2653 182 64 6 chr5 196034819 196035287 -7050245 + LTR42 LTR ERVL 1 495 0 236 182 91 64 chr5 196035345 196035455 -7050077 - Charlie7 DNA MER1_type -47 2565 2453 1867 66 0 4 chr5 196035520 196035748 -7049784 - L1PA5 LINE L1 -11 6143 5917 748 215 52 146 chr5 196036544 196037126 -7048406 + MLT1H LTR MaLR 21 547 -2 246 294 118 66 chr5 196037153 196037565 -7047967 + L2 LINE L2 2779 3191 -81 233 216 0 0 chr5 196038255 196038306 -7047226 - L2 LINE L2 0 3313 3263 605 328 132 16 chr5 196038399 196038845 -7046687 + L2 LINE L2 2777 3273 -40 30 0 0 0 chr5 196039108 196039138 -7046394 + AT_rich Low_complexity Low_complexity 1 30 0 237 169 239 0 chr5 196039190 196039261 -7046271 + L1ME4a LINE L1 5524 5611 -510 234 0 0 0 chr5 196039324 196039350 -7046182 + (A)n Simple_repeat Simple_repeat 1 26 0 754 25 0 0 chr5 196039444 196039525 -7046007 + AluY SINE Alu 50 130 -181 425 276 80 22 chr5 196039574 196039849 -7045683 + L1ME4a LINE L1 5830 6120 -1 527 349 154 11 chr5 196040300 196041057 -7044475 - L2 LINE L2 -183 3089 2228 205 354 94 41 chr5 196041204 196041735 -7043797 - L2 LINE L2 -2553 761 203 751 296 53 78 chr5 196041811 196041945 -7043587 - L2 LINE L2 -5 3308 3172 279 0 0 0 chr5 196041945 196041976 -7043556 + (TG)n Simple_repeat Simple_repeat 1 31 0 751 296 53 78 chr5 196041976 196042340 -7043192 - L2 LINE L2 -141 3172 2817 2094 173 60 22 chr5 196042340 196042791 -7042741 - MER110A LTR ERV1 0 468 1 751 296 53 78 chr5 196042791 196042845 -7042687 - L2 LINE L2 -496 2817 2763 538 256 150 59 chr5 196042854 196043174 -7042358 - MLT1H LTR MaLR 0 549 201 1081 66 7 0 chr5 196043207 196043343 -7042189 - AluYa5 SINE Alu -19 292 156 2007 120 0 3 chr5 196043343 196043626 -7041906 + AluY SINE Alu 20 301 -10 239 384 28 11 chr5 196043763 196043940 -7041592 + L2 LINE L2 2871 3050 -222 737 200 135 16 chr5 196044077 196044314 -7041218 - MLT1F1 LTR MaLR -51 603 201 1350 181 81 0 chr5 196044698 196044958 -7040574 - MER1B DNA MER1_type 0 339 59 1003 233 59 21 chr5 196044993 196045423 -7040109 + MER74A LTR ERVL 4 528 -30 740 245 80 7 chr5 196045476 196045819 -7039713 - MLT1J2 LTR MaLR 0 450 37 603 239 38 22 chr5 196045820 196046004 -7039528 - MIR SINE MIR -44 218 32 372 276 51 0 chr5 196046135 196046233 -7039299 + MER91C DNA MER1_type 38 140 0 205 333 0 0 chr5 196046251 196046305 -7039227 - L2 LINE L2 -8 3264 3211 194 83 56 0 chr5 196047393 196047429 -7038103 + CT-rich Low_complexity Low_complexity 1 38 0 181 305 85 0 chr5 196047799 196047858 -7037674 - L2 LINE L2 -2 3311 3248 292 306 75 22 chr5 196047921 196048055 -7037477 + MIR SINE MIR 114 254 -8 589 111 10 10 chr5 196048598 196048697 -7036835 + THE1C-int LTR MaLR 1482 1580 0 479 141 51 0 chr5 196048699 196048777 -7036755 + THE1C LTR MaLR 3 84 -291 219 69 0 0 chr5 196049515 196049544 -7035988 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 3604 129 64 8 chr5 196050318 196050931 -7034601 + L1MA8 LINE L1 5644 6290 -1 451 251 174 19 chr5 196051592 196051799 -7033733 - MIR SINE MIR -6 256 18 223 224 35 0 chr5 196051989 196052074 -7033458 + CT-rich Low_complexity Low_complexity 2 89 0 354 259 44 34 chr5 196053173 196053350 -7032182 - MIR SINE MIR -38 224 4 286 220 96 73 chr5 196053462 196053639 -7031893 - Charlie7 DNA MER1_type -16 2596 2416 232 365 10 0 chr5 196053690 196053794 -7031738 + L2 LINE L2 3168 3272 0 921 202 0 0 chr5 196053794 196054049 -7031483 + (TGGA)n Simple_repeat Simple_repeat 1 255 0 239 306 52 71 chr5 196054268 196054536 -7030996 - L2 LINE L2 -655 2659 2397 349 228 172 41 chr5 196054558 196054703 -7030829 - MIR SINE MIR -3 259 96 240 233 0 155 chr5 196055017 196055084 -7030448 - L2 LINE L2 -1 3312 3269 429 272 231 0 chr5 196055084 196055257 -7030275 - MER58C DNA MER1_type -2 213 1 240 233 0 155 chr5 196055257 196055305 -7030227 - L2 LINE L2 -44 3269 3215 194 301 55 68 chr5 196055396 196055469 -7030063 + L2 LINE L2 3112 3183 -89 455 307 26 7 chr5 196055950 196056103 -7029429 + MIR SINE MIR 70 225 -37 256 303 163 4 chr5 196057473 196057750 -7027782 - MLT1K LTR MaLR -2 586 266 2291 103 0 3 chr5 196058188 196058489 -7027043 - AluSx SINE Alu -12 300 1 1415 254 55 36 chr5 196060295 196061072 -7024460 - L1ME3A LINE L1 -224 5929 5103 1025 189 0 26 chr5 196061344 196061535 -7023997 + AluJo SINE Alu 89 274 -38 752 268 44 17 chr5 196061555 196061850 -7023682 - L1ME3A LINE L1 -3595 2534 2232 1195 195 5 28 chr5 196061857 196062072 -7023460 - MER82 DNA MER2_type 0 653 444 409 313 17 67 chr5 196062102 196062281 -7023251 + MIR SINE MIR 2 171 -37 498 228 0 0 chr5 196062323 196062415 -7023117 - MER82 DNA MER2_type -560 93 2 234 257 14 14 chr5 196062553 196062623 -7022909 + HsTC2 DNA Tc2 7 76 -1822 599 147 0 11 chr5 196062649 196062744 -7022788 + MER4A LTR ERV1 1 94 -570 1828 106 164 95 chr5 196062747 196063125 -7022407 + MER4A LTR ERV1 261 664 0 1023 232 67 32 chr5 196063147 196063492 -7022040 + HsTC2 DNA Tc2 1284 1816 -82 548 238 95 5 chr5 196063532 196063742 -7021790 + HsTC2 DNA Tc2 1667 1895 -3 398 291 152 48 chr5 196064091 196064827 -7020705 - L1MEd LINE L1 -4579 1731 809 1931 86 0 4 chr5 196064827 196065130 -7020402 - AluY SINE Alu 0 341 40 398 291 152 48 chr5 196065130 196065453 -7020079 - L1MEd LINE L1 -5501 809 521 200 292 15 0 chr5 196066072 196066137 -7019395 + MIR SINE MIR 158 223 -39 370 335 11 11 chr5 196066542 196066727 -7018805 - L2 LINE L2 -399 2915 2731 1327 210 112 44 chr5 196066733 196067143 -7018389 + L1ME2 LINE L1 5693 6130 -34 903 187 48 19 chr5 196067710 196067919 -7017613 - MER20 DNA MER1_type -4 215 1 2176 117 3 7 chr5 196068334 196068634 -7016898 - AluSc SINE Alu 0 309 11 370 75 0 60 chr5 196068651 196068718 -7016814 - L1PA10 LINE L1 -3 6165 6103 1147 80 0 0 chr5 196068719 196068869 -7016663 + L1PA8A LINE L1 5750 5899 -232 2357 99 0 6 chr5 196068886 196069199 -7016333 - AluY SINE Alu 0 311 1 1721 82 0 26 chr5 196069433 196069665 -7015867 - AluY SINE Alu -76 235 10 240 169 182 13 chr5 196069690 196069767 -7015765 - MIR SINE MIR -11 251 162 286 333 54 0 chr5 196069908 196070019 -7015513 + L2 LINE L2 3137 3253 -19 341 356 47 30 chr5 196070458 196070694 -7014838 - MIR SINE MIR -3 259 20 1092 286 116 57 chr5 196071481 196072620 -7012912 - L2 LINE L2 -5 3308 2101 239 293 13 0 chr5 196072615 196072690 -7012842 + MIR SINE MIR 94 169 -93 * 542 319 105 31 chr5 196072971 196073330 -7012202 + L2 LINE L2 2046 2456 -858 2764 137 54 20 chr5 196073330 196073343 -7012189 + L1MA4 LINE L1 5738 5749 -551 2387 76 0 3 chr5 196073343 196073644 -7011888 + AluY SINE Alu 1 300 -11 2764 137 54 20 chr5 196073644 196074170 -7011362 + L1MA4 LINE L1 5749 6295 -5 542 319 105 31 chr5 196074170 196074324 -7011208 + L2 LINE L2 2456 2597 -717 2200 153 42 8 chr5 196074538 196074917 -7010615 - MSTB1 LTR MaLR -40 392 1 554 253 121 11 chr5 196074935 196075109 -7010423 - MIR SINE MIR -51 211 19 216 328 0 0 chr5 196075194 196075252 -7010280 + CT-rich Low_complexity Low_complexity 2 59 0 2298 91 3 10 chr5 196075338 196075634 -7009898 + AluSx SINE Alu 11 304 -8 1359 64 6 0 chr5 196075953 196076124 -7009408 + L1PA3 LINE L1 5979 6150 -5 191 307 151 11 chr5 196076265 196076444 -7009088 + L2 LINE L2 2553 2756 -558 848 253 91 0 chr5 196077548 196077734 -7007798 - MER58A DNA MER1_type 0 224 22 386 267 28 72 chr5 196077936 196078009 -7007523 + MER20 DNA MER1_type 31 106 -113 2375 93 48 31 chr5 196078009 196078363 -7007169 - THE1B LTR MaLR 0 364 5 386 267 28 72 chr5 196078363 196078469 -7007063 + MER20 DNA MER1_type 106 202 -17 421 265 48 14 chr5 196079329 196079476 -7006056 - MIR SINE MIR -46 216 65 303 240 106 10 chr5 196079745 196079849 -7005683 + MLT1J2 LTR MaLR 210 323 -127 243 336 128 8 chr5 196079874 196079999 -7005533 - MIR SINE MIR -121 141 2 25 31 0 0 chr5 196080608 196080640 -7004892 + AT_rich Low_complexity Low_complexity 1 32 0 479 262 98 74 chr5 196081226 196081612 -7003920 - MLT1H LTR MaLR 0 549 42 745 315 36 36 chr5 196082050 196082656 -7002876 - L2 LINE L2 -5 3308 2604 356 271 21 0 chr5 196082710 196082806 -7002726 - MLT1J1 LTR MaLR -123 323 226 1494 181 62 52 chr5 196083645 196084031 -7001501 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr5 196084998 196085026 -7000506 + AT_rich Low_complexity Low_complexity 1 28 0 336 179 12 71 chr5 196085026 196085110 -7000422 + MLT1J2 LTR MaLR 372 450 0 * 561 211 74 0 chr5 196085110 196085281 -7000251 - MER113 DNA MER1_type? -337 184 1 1427 245 68 74 chr5 196085541 196086190 -6999342 + Charlie8 DNA MER1_type 29 673 -1744 237 252 94 44 chr5 196086907 196087066 -6998466 + MIR SINE MIR 53 219 -43 316 179 15 15 chr5 196087354 196087421 -6998111 - MIR SINE MIR -109 153 87 4142 152 36 76 chr5 196087840 196088702 -6996830 + L1MB3 LINE L1 5326 6152 -31 2240 95 3 14 chr5 196088702 196088996 -6996536 - AluSg SINE Alu -19 291 1 4142 152 36 76 chr5 196088996 196089027 -6996505 + L1MB3 LINE L1 6152 6183 0 234 0 0 0 chr5 196089280 196089306 -6996226 + (A)n Simple_repeat Simple_repeat 1 26 0 291 364 23 27 chr5 196090156 196090417 -6995115 - MER102a DNA MER1_type 0 330 71 1742 170 0 4 chr5 196090433 196090710 -6994822 - AluJo SINE Alu -36 276 1 228 35 0 0 chr5 196090842 196090871 -6994661 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 605 191 0 0 chr5 196092013 196092128 -6993404 + L1MB2 LINE L1 5502 5616 -567 * 3576 32 0 3 chr5 196092126 196092662 -6992870 + L1P2 LINE L1 5140 5674 -480 30 45 0 0 chr5 196093029 196093073 -6992459 + AT_rich Low_complexity Low_complexity 1 44 0 1397 173 0 0 chr5 196093075 196093312 -6992220 + L1MB2 LINE L1 5595 5831 -340 1368 174 23 27 chr5 196093312 196093571 -6991961 + AluJb SINE Alu 1 258 -54 1490 140 26 4 chr5 196093577 196093841 -6991691 + L1MB2 LINE L1 5902 6171 0 296 262 16 0 chr5 196094227 196094551 -6990981 + (TA)n Simple_repeat Simple_repeat 1 329 0 310 246 56 79 chr5 196094713 196094740 -6990792 - MIR SINE MIR -66 142 116 2904 80 0 0 chr5 196094740 196095104 -6990428 + THE1B LTR MaLR 1 364 0 310 246 56 79 chr5 196095104 196095202 -6990330 - MIR SINE MIR -92 116 20 804 222 39 0 chr5 196095210 196095390 -6990142 - MER5A DNA MER1_type 0 189 3 2306 212 73 9 chr5 196095842 196096376 -6989156 + MER90 LTR ERV1 8 575 0 220 340 44 38 chr5 196096975 196097134 -6988398 - MIR SINE MIR -29 233 74 316 220 55 0 chr5 196098174 196098265 -6987267 + MER53 DNA DNA 88 183 -6 273 223 53 32 chr5 196098182 196098276 -6987256 - MER53 DNA DNA -88 101 6 * 2049 122 3 10 chr5 196098352 196098669 -6986863 - AluSp SINE Alu 0 315 1 2691 244 53 17 chr5 196098906 196100091 -6985441 + L1MCb LINE L1 985 2488 -4257 241 293 91 23 chr5 196101112 196101246 -6984286 + MIR SINE MIR 16 156 -62 245 281 0 0 chr5 196101765 196101829 -6983703 + MIR SINE MIR 117 180 -82 564 305 214 18 chr5 196102381 196102835 -6982697 + L2 LINE L2 2777 3313 0 189 0 0 0 chr5 196103136 196103157 -6982375 + (A)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr5 196104227 196104248 -6981284 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr5 196104310 196104355 -6981177 + AT_rich Low_complexity Low_complexity 1 45 0 973 228 78 110 chr5 196104360 196104495 -6981037 - HAL1 LINE L1 -91 2416 2278 2121 116 3 35 chr5 196104495 196104814 -6980718 - AluSx SINE Alu -3 309 1 973 228 78 110 chr5 196104814 196105166 -6980366 - HAL1 LINE L1 -229 2278 1949 2295 91 0 3 chr5 196105166 196105462 -6980070 - AluSx SINE Alu -17 295 1 973 228 78 110 chr5 196105462 196105575 -6979957 - HAL1 LINE L1 -558 1949 1834 1771 239 11 48 chr5 196105578 196106117 -6979415 + MER65B LTR ERV1 4 522 -9 1749 180 108 36 chr5 196106851 196107296 -6978236 + MER34 LTR ERV1 38 514 -28 240 86 0 0 chr5 196107361 196107396 -6978136 + (TATG)n Simple_repeat Simple_repeat 2 36 0 436 250 88 71 chr5 196107456 196107988 -6977544 + MER31-int LTR ERV1 1537 3048 -2846 1181 189 0 9 chr5 196108011 196108223 -6977309 - MER6B DNA MER2_type 0 210 1 1388 206 49 0 chr5 196108351 196108618 -6976914 + AluJo SINE Alu 23 302 -10 338 238 73 7 chr5 196108622 196108773 -6976759 + MER31-int LTR ERV1 2334 2494 -2377 22 35 0 0 chr5 196108852 196108881 -6976651 + AT_rich Low_complexity Low_complexity 1 29 0 546 197 16 102 chr5 196108991 196109235 -6976297 + MER31-int LTR ERV1 3729 3951 -2647 551 215 57 83 chr5 196109260 196109510 -6976022 + MER31-int LTR ERV1 2626 4355 -1908 902 315 91 21 chr5 196109528 196110010 -6975522 - HAL1 LINE L1 -1991 516 1 2466 49 0 0 chr5 196110045 196110376 -6975156 - AluY SINE Alu 0 331 1 234 271 71 0 chr5 196112171 196112241 -6973291 - MIR SINE MIR -70 192 118 189 200 44 0 chr5 196112308 196112353 -6973179 - MIR SINE MIR -157 105 59 1974 134 156 11 chr5 196112451 196112823 -6972709 + MSTA LTR MaLR 3 428 0 199 324 83 56 chr5 196112959 196113067 -6972465 - L2 LINE L2 -40 3232 3122 473 191 85 0 chr5 196113105 196113199 -6972333 - MER81 DNA DNA 0 114 13 187 331 99 21 chr5 196113629 196113771 -6971761 + MIR SINE MIR 73 225 -37 242 275 38 12 chr5 196113824 196113904 -6971628 - MLT1K LTR MaLR -22 566 485 317 127 0 28 chr5 196113986 196114057 -6971475 + (TCTCTG)n Simple_repeat Simple_repeat 2 70 0 2431 164 16 11 chr5 196114085 196114524 -6971008 + MER65A LTR ERV1 5 445 0 2205 88 46 3 chr5 196114619 196114904 -6970628 - AluSq SINE Alu -16 297 1 6348 191 58 73 chr5 196114909 196116662 -6968870 + MER65A-int LTR ERV1 83 1861 -3930 2377 99 3 0 chr5 196116662 196116966 -6968566 - AluSp SINE Alu 0 313 9 6348 191 58 73 chr5 196116966 196117334 -6968198 + MER65A-int LTR ERV1 1861 2233 -3558 2112 107 10 3 chr5 196117334 196117625 -6967907 + AluSg SINE Alu 5 297 -13 6348 191 58 73 chr5 196117625 196118506 -6967026 + MER65A-int LTR ERV1 2233 3433 -2358 402 175 0 0 chr5 196118519 196118599 -6966933 + CT-rich Low_complexity Low_complexity 4 83 0 2156 118 7 0 chr5 196118616 196118903 -6966629 - AluSc SINE Alu -20 289 1 1798 174 31 0 chr5 196118948 196119235 -6966297 - AluSx SINE Alu -16 296 1 287 167 0 0 chr5 196119376 196119424 -6966108 + MER65A-int LTR ERV1 2429 2476 -4282 814 149 96 48 chr5 196119542 196119730 -6965802 + MER65A-int LTR ERV1 3536 3732 -2866 677 151 7 36 chr5 196119808 196119947 -6965585 + MER65A-int LTR ERV1 3731 3865 -2733 2559 231 83 87 chr5 196119965 196121085 -6964447 + MER65A-int LTR ERV1 2480 3596 -1340 1942 107 0 4 chr5 196121085 196121348 -6964184 - AluSg SINE Alu -12 298 37 2559 231 83 87 chr5 196121348 196121552 -6963980 + MER65A-int LTR ERV1 3596 3799 -1137 351 73 127 18 chr5 196121666 196121721 -6963811 + MER65A-int LTR ERV1 5337 5397 -934 853 215 24 56 chr5 196121730 196121948 -6963584 + MER65A-int LTR ERV1 3607 4580 -1006 660 248 13 2 chr5 196121945 196122169 -6963363 + MER65A-int LTR ERV1 3868 4128 -743 * 2495 242 48 11 chr5 196122178 196122622 -6962910 + MER65A-int LTR ERV1 4242 4715 -156 2321 109 0 0 chr5 196122622 196122926 -6962606 - AluSx SINE Alu -8 304 1 2495 242 48 11 chr5 196122926 196123089 -6962443 + MER65A-int LTR ERV1 4715 4871 0 2853 149 5 13 chr5 196123089 196123538 -6961994 + MER65A LTR ERV1 1 445 0 396 195 13 33 chr5 196123539 196123838 -6961694 + (TCTCTG)n Simple_repeat Simple_repeat 1 293 0 279 278 75 97 chr5 196123840 196124137 -6961395 - MLT1K LTR MaLR -158 430 141 393 263 30 23 chr5 196124137 196124270 -6961262 + MER94 DNA DNA 1 134 0 196 199 156 121 chr5 196124788 196124929 -6960603 + MIR SINE MIR 2 147 -115 455 284 193 0 chr5 196125496 196125693 -6959839 - MIR SINE MIR -26 236 2 236 315 65 11 chr5 196125817 196125909 -6959623 - L2 LINE L2 -42 3230 3134 191 383 50 8 chr5 196126201 196126321 -6959211 + MIR SINE MIR 20 144 -118 1667 215 3 3 chr5 196126324 196126636 -6958896 - L1MC/D LINE L1 -591 5768 5457 433 141 11 43 chr5 196126636 196126728 -6958804 - MLT2C2 LTR ERVL -1 463 375 314 26 0 0 chr5 196126728 196126766 -6958766 - L1MC/D LINE L1 -811 5431 5394 * 2544 187 44 42 chr5 196126765 196126923 -6958609 + L1MD2 LINE L1 5785 5941 -418 2126 199 18 78 chr5 196126923 196127476 -6958056 + MLT2B1 LTR ERVL 1 520 0 2544 187 44 42 chr5 196127476 196127681 -6957851 + L1MD2 LINE L1 5941 6144 -215 198 91 0 0 chr5 196127681 196127714 -6957818 + (CA)n Simple_repeat Simple_repeat 2 34 0 2544 187 44 42 chr5 196127714 196127921 -6957611 + L1MD2 LINE L1 6144 6357 -2 220 229 0 0 chr5 196128199 196128247 -6957285 + (TA)n Simple_repeat Simple_repeat 1 48 0 4308 42 6 0 chr5 196128751 196129246 -6956286 - L1PA4 LINE L1 0 6155 5658 3273 31 12 43 chr5 196129246 196129823 -6955709 + L1PA4 LINE L1 5110 5666 -489 4104 209 73 40 chr5 196130028 196130474 -6955058 + MER45B DNA AcHobo 3 433 -1148 738 53 0 0 chr5 196130474 196130569 -6954963 + (TA)n Simple_repeat Simple_repeat 2 96 0 2404 77 7 0 chr5 196130569 196130868 -6954664 - AluY SINE Alu -10 301 1 4104 209 73 40 chr5 196130868 196131425 -6954107 + MER45B DNA AcHobo 432 1040 0 205 186 23 0 chr5 196131652 196131695 -6953837 + (TG)n Simple_repeat Simple_repeat 2 45 0 1386 268 50 24 chr5 196131956 196132378 -6953154 + MLT1J1 LTR MaLR 6 438 -8 770 335 21 0 chr5 196133278 196133520 -6952012 + MIR SINE MIR 15 261 -1 430 335 60 17 chr5 196134073 196134306 -6951226 + MIR SINE MIR 9 251 -11 1752 190 50 3 chr5 196134880 196135201 -6950331 + MLT1B LTR MaLR 1 336 -54 2186 106 0 20 chr5 196135203 196135504 -6950028 - AluSx SINE Alu -17 295 1 281 105 0 0 chr5 196135775 196135813 -6949719 - MLT2C1 LTR ERVL -9 388 351 258 164 0 33 chr5 196135825 196135886 -6949646 + LOR1-int LTR ERV1 854 912 -7208 1407 220 22 40 chr5 196135887 196136283 -6949249 - MLT2B1 LTR ERVL -68 452 11 227 315 31 15 chr5 196136616 196136746 -6948786 - L2 LINE L2 -190 3082 2951 366 23 0 0 chr5 196136971 196137014 -6948518 + (GA)n Simple_repeat Simple_repeat 2 44 0 1603 179 92 38 chr5 196137074 196137420 -6948112 - MLT1A1 LTR MaLR 0 365 1 404 296 0 0 chr5 196137840 196137938 -6947594 + L2 LINE L2 3216 3313 0 448 116 0 70 chr5 196138266 196138352 -6947180 + L1PB4 LINE L1 6075 6154 -2 7362 98 5 16 chr5 196138482 196139558 -6945974 - L1P LINE L1 -758 5388 4325 2177 82 50 10 chr5 196139558 196139849 -6945683 + L1PA8A LINE L1 5816 6130 -1 673 237 68 44 chr5 196139858 196140107 -6945425 - MIR SINE MIR 0 262 8 717 304 18 9 chr5 196140600 196140827 -6944705 + MIR SINE MIR 8 236 -26 255 250 50 70 chr5 196140912 196141012 -6944520 + MLT1L LTR MaLR 506 603 -12 46 62 0 0 chr5 196142259 196142340 -6943192 + AT_rich Low_complexity Low_complexity 1 81 0 325 204 10 19 chr5 196142506 196142609 -6942923 + (CAT)n Simple_repeat Simple_repeat 1 102 0 234 288 104 32 chr5 196142614 196142739 -6942793 + MIR SINE MIR 59 192 -70 2419 87 0 7 chr5 196142839 196143149 -6942383 - AluSc SINE Alu -1 308 1 258 316 0 82 chr5 196143251 196143349 -6942183 + MIR SINE MIR 22 111 -97 399 315 123 6 chr5 196143376 196143538 -6941994 + MER5A DNA MER1_type 3 183 -6 256 314 32 8 chr5 196143770 196143894 -6941638 + HAL1b LINE L1 482 608 -740 2287 146 24 0 chr5 196143989 196144325 -6941207 - MER2 DNA MER2_type 0 344 1 1559 169 8 0 chr5 196144530 196144785 -6940747 - Tigger2 DNA MER2_type -1 2717 2461 4437 158 21 0 chr5 196144849 196145577 -6939955 - Tigger2 DNA MER2_type -1974 744 2 203 88 29 0 chr5 196145688 196145722 -6939810 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr5 196145741 196145776 -6939756 + AT_rich Low_complexity Low_complexity 1 35 0 525 250 25 54 chr5 196146043 196146247 -6939285 + L1MC4a LINE L1 5713 5910 -1898 922 112 26 4 chr5 196146279 196146513 -6939019 + (TGGA)n Simple_repeat Simple_repeat 1 239 0 290 294 134 25 chr5 196147685 196147886 -6937646 - MIR SINE MIR -18 244 22 247 224 289 0 chr5 196147984 196148060 -6937472 + MIR SINE MIR 49 146 -116 292 239 126 44 chr5 196148876 196149035 -6936497 + MIR SINE MIR 28 199 -63 657 295 68 8 chr5 196149087 196149321 -6936211 + MIR SINE MIR 14 261 -1 1778 176 0 17 chr5 196149343 196149644 -6935888 + AluJo SINE Alu 1 296 -16 261 213 40 0 chr5 196149808 196149883 -6935649 - MER69 DNA AcHobo -70 2456 2379 4164 212 68 65 chr5 196149892 196151000 -6934532 - MER21B-int LTR ERV1 -875 3316 2206 1783 234 30 64 chr5 196150997 196151433 -6934099 - MER21B-int LTR ERV1 -2088 2103 1683 * 778 194 0 86 chr5 196151519 196151694 -6933838 - MER21B-int LTR ERV1 -2394 1797 1638 1286 224 49 14 chr5 196151762 196152122 -6933410 - MER21B-int LTR ERV1 -2225 4533 1343 1178 245 76 3 chr5 196152337 196152627 -6932905 - MER21B-int LTR ERV1 -3868 323 13 1876 262 111 40 chr5 196152670 196153353 -6932179 - MER21B LTR ERV1 -125 738 7 923 169 114 65 chr5 196153359 196153594 -6931938 - MER69 DNA AcHobo -160 2366 2111 2321 117 0 0 chr5 196153594 196153903 -6931629 - AluSg SINE Alu -1 309 1 923 169 114 65 chr5 196153903 196153975 -6931557 - MER69 DNA AcHobo -415 2111 2044 1518 283 64 14 chr5 196154001 196154514 -6931018 - MER69 DNA AcHobo -658 568 30 333 213 0 0 chr5 196154562 196154623 -6930909 - MER97c DNA MER1_type? -911 179 119 951 224 0 0 chr5 196154644 196154823 -6930709 - MER97b DNA MER1_type? -874 179 1 240 135 0 0 chr5 196154823 196154859 -6930673 - MER69 DNA AcHobo -2489 37 2 568 296 0 55 chr5 196154973 196155172 -6930360 + MIR SINE MIR 3 190 -72 292 324 173 11 chr5 196155202 196155381 -6930151 - L2 LINE L2 -372 2942 2735 825 251 57 122 chr5 196155489 196155942 -6929590 + MER110 LTR ERV1 80 484 0 1192 56 0 7 chr5 196155951 196156094 -6929438 + L1PA3 LINE L1 6011 6152 -3 187 318 92 99 chr5 196156511 196156607 -6928925 - L2 LINE L2 0 3272 3177 2171 100 3 3 chr5 196156607 196156908 -6928624 + AluY SINE Alu 1 301 -10 187 318 92 99 chr5 196156908 196157094 -6928438 - L2 LINE L2 -95 3177 2992 2160 92 0 7 chr5 196157147 196157428 -6928104 + AluSp SINE Alu 2 280 -33 354 98 0 0 chr5 196157431 196157482 -6928050 + (GGGGA)n Simple_repeat Simple_repeat 5 55 0 195 129 0 0 chr5 196157602 196157633 -6927899 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 299 314 15 53 chr5 196158726 196158921 -6926611 + MIR SINE MIR 5 193 -69 659 241 44 57 chr5 196158963 196159191 -6926341 - MIR SINE MIR -10 252 28 842 274 73 22 chr5 196159277 196159635 -6925897 - L1ME1 LINE L1 0 6166 5791 327 278 65 19 chr5 196161107 196161215 -6924317 + Charlie8 DNA MER1_type 89 201 -2216 336 299 147 32 chr5 196162838 196163152 -6922380 - L1ME4a LINE L1 -27 6094 5745 1727 178 25 0 chr5 196163192 196163478 -6922054 - AluJo SINE Alu -13 299 7 1143 235 109 68 chr5 196163584 196163636 -6921896 - MLT1C LTR MaLR -4 463 415 3693 139 4 13 chr5 196163636 196164168 -6921364 - MER1A DNA MER1_type 0 527 1 1143 235 109 68 chr5 196164168 196164554 -6920978 - MLT1C LTR MaLR -52 415 7 394 289 20 71 chr5 196165266 196165519 -6920013 + L1M4 LINE L1 3865 4104 -2042 1876 209 43 3 chr5 196165655 196166004 -6919528 + MLT1A1 LTR MaLR 3 365 0 368 240 31 101 chr5 196166017 196166146 -6919386 - L2 LINE L2 0 3313 3194 2139 98 3 39 chr5 196166316 196166621 -6918911 + AluSx SINE Alu 1 294 -18 233 228 22 76 chr5 196166650 196166742 -6918790 - MIR SINE MIR -71 191 105 282 224 112 17 chr5 196167453 196167569 -6917963 - L1ME4a LINE L1 -30 6091 5965 378 210 193 8 chr5 196167699 196167818 -6917714 + MIR SINE MIR 110 250 -12 1446 233 39 5 chr5 196169120 196169510 -6916022 - L1MD2 LINE L1 -325 6034 5632 1383 265 102 7 chr5 196169569 196170165 -6915367 + L1M4 LINE L1 4613 5265 -881 252 0 0 0 chr5 196170165 196170193 -6915339 + (TA)n Simple_repeat Simple_repeat 2 29 0 3195 260 48 13 chr5 196170223 196171767 -6913765 + L1MEc LINE L1 1957 3515 -2700 425 301 47 26 chr5 196171828 196172051 -6913481 + L1ME3A LINE L1 2455 2679 -3861 293 304 85 32 chr5 196172054 196172370 -6913162 + L1ME3A LINE L1 4909 5241 -1299 2104 167 167 0 chr5 196172572 196173010 -6912522 + LTR53 LTR ERVL 9 519 0 668 194 74 6 chr5 196173033 196173208 -6912324 - MER53 DNA DNA -1 188 2 393 233 122 72 chr5 196173211 196173391 -6912141 + MER20 DNA MER1_type 31 219 0 391 276 25 33 chr5 196173538 196173813 -6911719 + L1ME3A LINE L1 5515 5787 -753 504 308 161 30 chr5 196173818 196174063 -6911469 + L1ME3A LINE L1 5796 6008 -550 1677 147 93 9 chr5 196174063 196174396 -6911136 - MER46B DNA MER2_type 0 236 1 504 308 161 30 chr5 196174396 196174570 -6910962 + L1ME3A LINE L1 6008 6249 -309 300 288 97 88 chr5 196175291 196175711 -6909821 - L1ME4a LINE L1 -27 6094 5668 2217 93 37 0 chr5 196175711 196176011 -6909521 - AluY SINE Alu 0 311 1 300 288 97 88 chr5 196176011 196176056 -6909476 - L1ME4a LINE L1 -453 5668 5625 214 300 0 0 chr5 196176103 196176163 -6909369 + MIR SINE MIR 184 243 -19 296 270 270 7 chr5 196176186 196176334 -6909198 - MIR SINE MIR -29 233 47 297 0 0 0 chr5 196177192 196177225 -6908307 + (TTA)n Simple_repeat Simple_repeat 3 35 0 7593 22 0 0 chr5 196177225 196178876 -6906656 - L1PA3 LINE L1 -18 6137 4493 11696 25 0 1 chr5 196180266 196182080 -6903452 - L1PA3 LINE L1 -386 5769 3957 3263 15 8 18 chr5 196182080 196182466 -6903066 + L1PA3 LINE L1 5767 6155 0 403 246 89 42 chr5 196183221 196183412 -6902120 - L2 LINE L2 0 3313 3114 3055 238 50 31 chr5 196183489 196183725 -6901807 + L1MC3 LINE L1 1 231 -6155 1696 223 24 0 chr5 196183725 196184106 -6901426 + MLT1B LTR MaLR 1 390 0 3055 238 50 31 chr5 196184106 196185356 -6900176 + L1MC3 LINE L1 231 1535 -4851 320 200 0 0 chr5 196185440 196185500 -6900032 + L1MC4 LINE L1 6644 6703 -1339 189 211 0 0 chr5 196185507 196185564 -6899968 + (TA)n Simple_repeat Simple_repeat 2 58 0 7506 249 58 32 chr5 196185609 196186049 -6899483 + L1MC3 LINE L1 1752 2179 -4385 2026 138 12 6 chr5 196186049 196186376 -6899156 - L1PA15 LINE L1 -2 6163 5835 7506 249 58 32 chr5 196186376 196188365 -6897167 + L1MC3 LINE L1 2179 4279 -2285 1821 135 38 24 chr5 196188365 196188653 -6896879 + AluSx SINE Alu 2 293 -19 7506 249 58 32 chr5 196188653 196189842 -6895690 + L1MC3 LINE L1 4279 5436 -1128 3611 58 4 2 chr5 196189861 196190446 -6895086 + MER11A LTR ERVK 1 824 -442 7955 190 77 20 chr5 196190448 196191655 -6893877 + L1MC3 LINE L1 5848 7209 -994 1899 140 48 0 chr5 196191655 196191947 -6893585 - AluSx SINE Alu -6 306 1 7955 190 77 20 chr5 196191947 196192680 -6892852 + L1MC3 LINE L1 7209 7899 -304 755 100 0 0 chr5 196192684 196192784 -6892748 + AluS SINE Alu 1 100 -212 273 208 200 58 chr5 196192805 196192925 -6892607 + L2 LINE L2 3136 3272 0 188 361 84 0 chr5 196193286 196193369 -6892163 + MIR SINE MIR 4 93 -169 252 330 26 82 chr5 196193382 196193589 -6891943 + MIR SINE MIR 17 212 -50 277 245 32 77 chr5 196193665 196193820 -6891712 - MER103 DNA DNA -7 159 12 339 317 52 34 chr5 196194036 196194064 -6891468 - MIR3 SINE MIR -14 248 222 1892 126 27 40 chr5 196194064 196194224 -6891308 - AluSq SINE Alu -16 297 141 2449 93 7 0 chr5 196194224 196194526 -6891006 - AluSx SINE Alu -8 304 1 1892 126 27 40 chr5 196194526 196194666 -6890866 - AluSq SINE Alu -172 141 1 339 317 52 34 chr5 196194666 196194873 -6890659 - MIR3 SINE MIR -40 222 11 217 259 17 0 chr5 196195381 196195439 -6890093 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 360 103 0 81 chr5 196195463 196195550 -6889982 + L1PA4 LINE L1 6073 6152 -3 595 276 52 25 chr5 196195634 196196073 -6889459 + L1MEc LINE L1 1021 1471 -4925 40 21 0 0 chr5 196196419 196196466 -6889066 + AT_rich Low_complexity Low_complexity 1 47 0 372 266 0 0 chr5 196196544 196196638 -6888894 + Charlie7 DNA MER1_type 6 99 -2513 280 265 37 19 chr5 196196643 196196805 -6888727 + Charlie7 DNA MER1_type 2447 2611 -1 1236 129 35 39 chr5 196196868 196197100 -6888432 + MER44D DNA MER2_type 1 501 -108 237 323 0 0 chr5 196197688 196197753 -6887779 - L2 LINE L2 -5 3308 3244 462 271 92 46 chr5 196197771 196197989 -6887543 - MIR SINE MIR -4 258 31 332 344 115 27 chr5 196198034 196198469 -6887063 - L2 LINE L2 -88 3184 2700 1961 205 0 3 chr5 196200588 196200954 -6884578 + MLT1A1 LTR MaLR 1 365 0 602 188 0 53 chr5 196201067 196201200 -6884332 + FLAM_A SINE Alu 1 126 -7 646 282 53 48 chr5 196201804 196202031 -6883501 + MIR SINE MIR 3 230 -32 212 211 0 0 chr5 196202376 196202414 -6883118 - MIR SINE MIR -3 259 222 924 242 53 0 chr5 196202415 196202642 -6882890 + MER58 DNA MER1_type 1 239 -102 251 210 48 16 chr5 196202639 196202701 -6882831 + MER58 DNA MER1_type 2357 2420 0 * 237 259 35 24 chr5 196202766 196202851 -6882681 - MIR SINE MIR -123 139 54 1351 266 62 19 chr5 196203619 196204089 -6881443 + MLT1J LTR MaLR 22 511 0 386 272 26 18 chr5 196204089 196204203 -6881329 - MIR SINE MIR -75 133 19 275 213 0 0 chr5 196204220 196204267 -6881265 - MIR SINE MIR 0 262 216 505 297 103 15 chr5 196204276 196204471 -6881061 + MIR SINE MIR 39 250 -12 200 298 157 25 chr5 196204599 196204720 -6880812 - L2 LINE L2 0 3272 3136 425 265 85 32 chr5 196205179 196205368 -6880164 + MIR SINE MIR 12 210 -52 2217 109 7 7 chr5 196206123 196206427 -6879105 - AluSc SINE Alu -5 304 1 434 261 23 8 chr5 196206751 196206881 -6878651 - MIR SINE MIR -8 254 123 275 292 153 15 chr5 196207203 196207340 -6878192 - L2 LINE L2 -519 2795 2640 250 289 72 0 chr5 196207795 196207878 -6877654 - MIR SINE MIR 0 262 174 849 224 11 0 chr5 196207893 196208076 -6877456 + MER82 DNA MER2_type 1 185 -468 1976 255 27 8 chr5 196208077 196208603 -6876929 + MER82 DNA MER2_type 116 651 -2 412 272 19 51 chr5 196208604 196208762 -6876770 - MIR SINE MIR -104 158 6 573 356 50 4 chr5 196209941 196210180 -6875352 - MIR SINE MIR 0 262 13 886 285 12 12 chr5 196211489 196211731 -6873801 - MIR SINE MIR -1 261 20 738 119 45 22 chr5 196211889 196212023 -6873509 - MSTB1 LTR MaLR 0 432 296 261 260 139 76 chr5 196212189 196212412 -6873120 + LTR16A1 LTR ERVL 52 288 -169 2328 74 9 49 chr5 196213159 196213483 -6872049 - AluY SINE Alu 0 311 1 237 276 37 10 chr5 196214003 196214116 -6871416 - MIR SINE MIR -63 145 76 426 269 161 0 chr5 196214611 196214741 -6870791 - MIR3 SINE MIR -20 188 38 849 130 19 0 chr5 196215279 196215441 -6870091 + (TCCA)n Simple_repeat Simple_repeat 3 167 0 201 74 0 0 chr5 196215477 196215504 -6870028 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 701 262 119 41 chr5 196216270 196217769 -6867763 - L1MC5 LINE L1 -747 5399 5438 2073 107 21 0 chr5 196217769 196218058 -6867474 + AluSc SINE Alu 1 295 -14 701 262 119 41 chr5 196218058 196218803 -6866729 - L1MC5 LINE L1 -707 5439 4754 799 268 131 40 chr5 196218814 196219266 -6866266 + LTR33 LTR ERVL 10 502 -19 259 190 0 40 chr5 196219332 196219432 -6866100 + (TCTA)n Simple_repeat Simple_repeat 1 96 0 3586 197 50 31 chr5 196219914 196220774 -6864758 - L1MB8 LINE L1 -1 6177 5285 1376 188 48 41 chr5 196220774 196221066 -6864466 + AluJo SINE Alu 1 294 -18 3586 197 50 31 chr5 196221066 196221544 -6863988 - L1MB8 LINE L1 -893 5285 4818 2120 162 63 48 chr5 196221687 196222163 -6863369 - LTR49 LTR ERV1 -24 571 89 2237 147 48 28 chr5 196222163 196222384 -6863148 - LTR49-int LTR ERV1 -879 5452 5218 2432 80 7 0 chr5 196222384 196222686 -6862846 + AluY SINE Alu 1 304 -7 2237 147 48 28 chr5 196222686 196222860 -6862672 - LTR49-int LTR ERV1 -1113 5218 5049 217 246 62 0 chr5 196223676 196223741 -6861791 + L2 LINE L2 3200 3268 -4 334 313 38 6 chr5 196223881 196224041 -6861491 - MER103 DNA DNA 0 166 2 957 325 63 35 chr5 196224355 196224783 -6860749 - MLT1K LTR MaLR -108 480 41 401 336 77 0 chr5 196224883 196225026 -6860506 - MIR SINE MIR -101 161 8 2169 119 3 28 chr5 196225098 196225418 -6860114 - AluSx SINE Alu 0 312 1 1292 256 97 33 chr5 196226045 196226561 -6858971 - MLT1H LTR MaLR 0 549 1 220 234 47 16 chr5 196226734 196226798 -6858734 + L3 LINE CR1 1384 1449 -128 438 298 144 16 chr5 196226945 196227133 -6858399 + MIR SINE MIR 48 259 -3 272 296 61 17 chr5 196227204 196227319 -6858213 + MLT1K LTR MaLR 92 211 -377 376 289 14 105 chr5 196227326 196227620 -6857912 + MLT1K LTR MaLR 150 416 -172 339 331 28 0 chr5 196227686 196227828 -6857704 - MIR SINE MIR -6 256 111 568 305 36 16 chr5 196228330 196228579 -6856953 - MIR SINE MIR 0 262 9 234 339 91 6 chr5 196229196 196229352 -6856180 - MIR SINE MIR -55 207 42 182 309 0 48 chr5 196229625 196229709 -6855823 + L2 LINE L2 2996 3075 -197 487 291 82 19 chr5 196230413 196230619 -6854913 - MIR SINE MIR -16 246 28 1011 303 79 58 chr5 196231063 196231630 -6853902 - MLT1K LTR MaLR 0 588 10 1833 168 7 0 chr5 196231758 196232049 -6853483 + AluJb SINE Alu 5 297 -15 253 278 87 26 chr5 196232084 196232199 -6853333 - MIR SINE MIR -50 212 91 1745 188 16 7 chr5 196232252 196232555 -6852977 - AluJo SINE Alu -6 306 1 300 149 55 53 chr5 196232926 196233020 -6852512 + MLT1J2 LTR MaLR 381 447 -3 2172 123 17 0 chr5 196233649 196233951 -6851581 + AluSx SINE Alu 1 307 -5 2082 138 0 6 chr5 196233998 196234309 -6851223 + AluSx SINE Alu 1 309 -3 207 282 0 0 chr5 196234485 196234544 -6850988 - MIR SINE MIR -65 143 96 22 0 0 0 chr5 196234622 196234644 -6850888 + AT_rich Low_complexity Low_complexity 1 22 0 230 288 38 0 chr5 196234648 196234728 -6850804 + MIR SINE MIR 107 189 -73 252 333 0 11 chr5 196234733 196234826 -6850706 + LTR67 LTR ERVL 2 93 -464 1372 203 73 67 chr5 196234836 196234960 -6850572 - L1MB8 LINE L1 -1 6177 6055 2323 110 0 0 chr5 196234960 196235259 -6850273 - AluSx SINE Alu -13 299 1 1372 203 73 67 chr5 196235259 196235586 -6849946 - L1MB8 LINE L1 -123 6055 5721 874 211 78 78 chr5 196235590 196235884 -6849648 - MSTD LTR MaLR -2 394 101 399 188 0 0 chr5 196235900 196235964 -6849568 + LTR67 LTR ERVL 107 170 -387 656 207 212 0 chr5 196236055 196236248 -6849284 - MIR SINE MIR -12 250 17 312 217 43 11 chr5 196236528 196236620 -6848912 - MIR SINE MIR -56 152 58 240 308 82 34 chr5 196236761 196236907 -6848625 + MIR SINE MIR 28 180 -82 330 218 13 26 chr5 196236907 196236985 -6848547 - L1MB8 LINE L1 -543 5578 5502 252 0 0 0 chr5 196237839 196237867 -6847665 + (TG)n Simple_repeat Simple_repeat 2 29 0 1796 237 94 6 chr5 196238577 196239066 -6846466 + MER34 LTR ERV1 11 542 0 324 252 87 9 chr5 196239658 196239773 -6845759 + MIR SINE MIR 70 193 -69 612 100 0 0 chr5 196239825 196239905 -6845627 + MADE1 DNA Mariner 1 80 0 2356 113 3 0 chr5 196240069 196240411 -6845121 + AluSg SINE Alu 1 343 0 256 335 2 41 chr5 196240656 196240834 -6844698 - MIR3 SINE MIR -6 202 32 216 333 73 10 chr5 196240931 196241027 -6844505 + MIR SINE MIR 31 132 -130 200 348 0 17 chr5 196241106 196241221 -6844311 + MIR SINE MIR 143 255 -7 1002 256 85 56 chr5 196241781 196242197 -6843335 + MLT1K LTR MaLR 84 584 -4 699 269 97 13 chr5 196242228 196242455 -6843077 - MIR SINE MIR -14 248 3 396 0 0 0 chr5 196243209 196243253 -6842279 + (GGGGA)n Simple_repeat Simple_repeat 2 45 0 1395 117 10 10 chr5 196243297 196243524 -6842008 + AluSc SINE Alu 97 309 0 10471 123 22 5 chr5 196243524 196245091 -6840441 + Tigger1 DNA MER2_type 612 2204 -214 813 116 0 8 chr5 196245088 196245209 -6840323 + Tigger1 DNA MER2_type 1896 2015 -403 * 1081 165 77 0 chr5 196245214 196245408 -6840124 + Tigger1 DNA MER2_type 2210 2418 0 232 330 128 0 chr5 196245650 196245744 -6839788 + MIR SINE MIR 46 151 -111 282 232 120 32 chr5 196246371 196246496 -6839036 - L2 LINE L2 0 3272 3137 1266 170 18 0 chr5 196246534 196246758 -6838774 - L1MA9 LINE L1 -601 5733 5506 * 1676 189 125 70 chr5 196246753 196246804 -6838728 + L1MA9 LINE L1 5737 5784 -528 820 161 0 0 chr5 196246804 196246934 -6838598 + FLAM_C SINE Alu 2 131 -2 1676 189 125 70 chr5 196246934 196247427 -6838105 + L1MA9 LINE L1 5784 6311 -1 1770 180 0 17 chr5 196247591 196247891 -6837641 + AluJb SINE Alu 1 295 -17 652 199 46 113 chr5 196248543 196248870 -6836662 + L1MC5 LINE L1 7609 7913 -48 357 272 78 34 chr5 196248948 196249154 -6836378 - MIR SINE MIR -43 219 5 364 264 84 76 chr5 196249372 196249622 -6835910 - L2 LINE L2 -338 2976 2725 2368 200 54 13 chr5 196249629 196250163 -6835369 + MER68 LTR ERV1 7 562 0 435 253 132 6 chr5 196250163 196250337 -6835195 - L2 LINE L2 -586 2728 2533 2529 75 0 3 chr5 196251525 196251833 -6833699 + AluSc SINE Alu 1 307 -2 245 244 47 23 chr5 196251958 196252044 -6833488 + MIR SINE MIR 78 165 -97 392 270 9 9 chr5 196252440 196252555 -6832977 + MIR SINE MIR 1 115 -147 2097 135 73 19 chr5 196253434 196253804 -6831728 - MLT1B LTR MaLR 0 390 1 225 203 177 13 chr5 196254646 196254725 -6830807 + MIR SINE MIR 41 132 -76 745 276 115 11 chr5 196254823 196255102 -6830430 - MLT1L LTR MaLR -13 602 295 246 191 18 0 chr5 196255295 196255350 -6830182 + MIR SINE MIR 102 156 -63 747 89 0 0 chr5 196256251 196256352 -6829180 + AluY SINE Alu 2 102 -209 1451 193 32 0 chr5 196256353 196256602 -6828930 - AluJb SINE Alu -55 257 1 641 169 0 7 chr5 196256830 196256972 -6828560 + CT-rich Low_complexity Low_complexity 2 142 0 226 351 125 30 chr5 196257352 196257520 -6828012 + MIR SINE MIR 4 187 -75 445 165 44 0 chr5 196258037 196258128 -6827404 - MIR SINE MIR -89 173 79 870 222 30 5 chr5 196258407 196258610 -6826922 - MIR SINE MIR -8 254 47 2398 93 3 0 chr5 196258690 196258990 -6826542 + AluSp SINE Alu 3 303 -10 200 264 226 31 chr5 196259033 196259192 -6826340 - MIR SINE MIR -20 242 53 2008 127 40 0 chr5 196260652 196260952 -6824580 + AluSx SINE Alu 1 312 0 742 252 115 34 chr5 196261866 196262318 -6823214 - MLT1F1 LTR MaLR 0 567 64 374 283 44 13 chr5 196263212 196263371 -6822161 - L1MC4a LINE L1 -1930 5878 5715 198 258 11 67 chr5 196263819 196263908 -6821624 + MIR SINE MIR 89 172 -90 2351 247 17 34 chr5 196264239 196264706 -6820826 + L1ME2 LINE L1 5522 5977 -187 2185 134 0 0 chr5 196264706 196265012 -6820520 + AluSx SINE Alu 6 311 -1 2351 247 17 34 chr5 196265012 196265188 -6820344 + L1ME2 LINE L1 5977 6154 -10 311 261 11 92 chr5 196265262 196265446 -6820086 + L1MC4 LINE L1 7864 8032 -10 772 246 57 28 chr5 196265477 196265688 -6819844 + MIR SINE MIR 36 252 -10 551 266 75 42 chr5 196267384 196267625 -6817907 + MIR SINE MIR 2 250 -12 1667 177 10 37 chr5 196268287 196268587 -6816945 + AluJb SINE Alu 1 292 -20 334 379 35 5 chr5 196268596 196268794 -6816738 + MIR SINE MIR 59 262 0 495 217 19 0 chr5 196269382 196269539 -6815993 + (TGGA)n Simple_repeat Simple_repeat 4 163 0 347 125 0 16 chr5 196269753 196269817 -6815715 + (GAA)n Simple_repeat Simple_repeat 1 63 0 278 311 0 0 chr5 196270592 196270682 -6814850 + MIR SINE MIR 59 148 -114 23 33 0 0 chr5 196271337 196271367 -6814165 + AT_rich Low_complexity Low_complexity 1 30 0 434 228 13 0 chr5 196271510 196271589 -6813943 + MER21B LTR ERV1 15 94 -769 2838 224 134 19 chr5 196271590 196272187 -6813345 + MER21B LTR ERV1 48 575 -288 669 0 21 32 chr5 196272187 196272281 -6813251 + (AATTG)n Simple_repeat Simple_repeat 1 93 0 2421 151 43 10 chr5 196272289 196272707 -6812825 - MSTB1 LTR MaLR 0 432 1 2838 224 134 19 chr5 196272707 196272829 -6812703 + MER21B LTR ERV1 581 860 -3 391 264 0 62 chr5 196273204 196273333 -6812199 - MER94 DNA DNA 0 134 14 359 307 8 24 chr5 196273399 196273526 -6812006 + MIR SINE MIR 21 145 -63 223 329 0 55 chr5 196273608 196273754 -6811778 + L2 LINE L2 2403 2540 -774 226 352 37 19 chr5 196274236 196274398 -6811134 + MIR3 SINE MIR 5 169 -39 2291 79 17 3 chr5 196274401 196274693 -6810839 - AluY SINE Alu -15 296 1 207 100 0 0 chr5 196275694 196275724 -6809808 + (GGA)n Simple_repeat Simple_repeat 3 32 0 184 302 87 20 chr5 196276887 196277036 -6808496 + L2 LINE L2 1705 1863 -1451 191 360 135 0 chr5 196277046 196277135 -6808397 + L2 LINE L2 3153 3253 -19 542 313 71 5 chr5 196278229 196278453 -6807079 + MIR SINE MIR 5 243 -19 299 331 0 29 chr5 196278479 196278615 -6806917 - MIR3 SINE MIR -62 146 15 433 292 47 6 chr5 196278622 196278793 -6806739 - MIR SINE MIR -1 261 84 236 233 139 12 chr5 196278871 196278957 -6806575 - MER63 DNA MER1_type 0 1060 964 * 458 196 22 11 chr5 196278949 196279041 -6806491 - MER63 DNA MER1_type -84 752 659 234 355 16 24 chr5 196279452 196279576 -6805956 - L2 LINE L2 -14 3258 3136 392 248 155 58 chr5 196279828 196280054 -6805478 + MIR SINE MIR 1 248 -14 232 303 162 7 chr5 196281146 196281288 -6804244 + MIR SINE MIR 98 261 -1 192 163 41 61 chr5 196281548 196281597 -6803935 - MIR SINE MIR -3 259 212 * 204 171 0 0 chr5 196281563 196281598 -6803934 - L2 LINE L2 -23 3290 3256 332 243 17 45 chr5 196281606 196281708 -6803824 - MIR SINE MIR -102 106 5 579 291 67 65 chr5 196282193 196282333 -6803199 + L2 LINE L2 2746 2884 -429 378 0 0 0 chr5 196282333 196282375 -6803157 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1949 117 49 0 chr5 196282377 196282643 -6802889 - AluSg SINE Alu -31 279 1 579 291 67 65 chr5 196282643 196283056 -6802476 + L2 LINE L2 2884 3308 -5 418 324 74 51 chr5 196283114 196283450 -6802082 + L2 LINE L2 2929 3272 0 186 274 0 113 chr5 196283970 196284017 -6801515 + MIR SINE MIR 107 137 -125 2499 70 0 0 chr5 196284017 196284316 -6801216 + AluSc SINE Alu 1 299 -10 186 274 0 113 chr5 196284316 196284374 -6801158 + MIR SINE MIR 137 200 -62 374 170 52 96 chr5 196284449 196284584 -6800948 - MER113 DNA MER1_type? -135 386 258 358 241 0 43 chr5 196284827 196284839 -6800693 - MER113 DNA MER1_type? -292 229 218 471 63 0 0 chr5 196284839 196284902 -6800630 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 1825 91 0 0 chr5 196284905 196285136 -6800396 - AluSg SINE Alu -41 269 39 358 241 0 43 chr5 196285136 196285235 -6800297 - MER113 DNA MER1_type? -305 216 119 234 0 0 0 chr5 196286738 196286764 -6798768 + (A)n Simple_repeat Simple_repeat 1 26 0 338 324 46 0 chr5 196288437 196288545 -6796987 + MIR SINE MIR 31 143 -119 1129 343 113 15 chr5 196288776 196290054 -6795478 - L2 LINE L2 -4 3309 1897 316 330 54 49 chr5 196291410 196291595 -6793937 - L2 LINE L2 -173 3099 2914 405 293 57 0 chr5 196291708 196291831 -6793701 + MIR SINE MIR 103 232 -30 239 177 97 0 chr5 196292063 196292125 -6793407 - MIR SINE MIR -56 206 139 204 280 0 0 chr5 196292290 196292340 -6793192 - L2 LINE L2 0 3272 3223 729 279 46 8 chr5 196292379 196292619 -6792913 - MIR SINE MIR 0 262 14 236 288 16 32 chr5 196293033 196293158 -6792374 - L2 LINE L2 -256 3016 2894 292 303 14 21 chr5 196293942 196294087 -6791445 + MIR SINE MIR 48 191 -71 542 277 49 11 chr5 196294111 196294295 -6791237 + MIR SINE MIR 72 262 0 200 302 0 0 chr5 196294297 196294350 -6791182 + L2 LINE L2 3244 3296 -17 1448 125 0 5 chr5 196294771 196294971 -6790561 + AluSc SINE Alu 96 294 -15 194 321 107 0 chr5 196295061 196295173 -6790359 + MIR SINE MIR 31 154 -108 245 260 0 0 chr5 196295562 196295612 -6789920 + MIR SINE MIR 100 149 -59 253 312 96 24 chr5 196296465 196296590 -6788942 - L2 LINE L2 -215 3057 2924 294 257 68 19 chr5 196296625 196296745 -6788787 + MIR SINE MIR 1 136 -72 372 278 26 9 chr5 196296764 196296879 -6788653 - MER5A DNA MER1_type 0 189 73 274 266 64 0 chr5 196297399 196297493 -6788039 + MIR SINE MIR 94 193 -69 2003 195 10 4 chr5 196297560 196298013 -6787519 - MER89 LTR ERV1 -4 555 1 308 227 175 10 chr5 196298026 196298123 -6787409 - L2 LINE L2 0 3313 3201 1034 172 9 73 chr5 196298545 196298778 -6786754 - L1MA8 LINE L1 -327 5964 5747 2293 105 0 0 chr5 196298899 196299193 -6786339 + AluSg SINE Alu 1 294 -16 218 280 75 9 chr5 196299417 196299524 -6786008 + MIR SINE MIR 64 177 -85 2291 192 41 0 chr5 196299549 196299960 -6785572 - MSTC LTR MaLR 0 428 1 1259 7 14 0 chr5 196300456 196300601 -6784931 - L1PA4 LINE L1 0 6155 6009 977 32 32 0 chr5 196300601 196300727 -6784805 + L1P LINE L1 5289 5418 -737 186 133 0 0 chr5 196300806 196300836 -6784696 + (TGG)n Simple_repeat Simple_repeat 2 31 0 2469 87 0 0 chr5 196301731 196302043 -6783489 - AluSx SINE Alu 0 312 1 283 348 11 0 chr5 196302215 196302304 -6783228 - MIR SINE MIR -89 119 30 232 341 0 0 chr5 196302599 196302690 -6782842 - L2 LINE L2 0 3272 3182 215 333 42 42 chr5 196302725 196302869 -6782663 + L2 LINE L2 3122 3265 -48 194 236 32 177 chr5 196302864 196303084 -6782448 - L2 LINE L2 -90 3182 2995 * 219 139 0 0 chr5 196304041 196304077 -6781455 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 321 258 21 0 chr5 196304682 196304779 -6780753 + MER5A DNA MER1_type 11 109 -80 1854 171 0 0 chr5 196305073 196305360 -6780172 - AluJb SINE Alu -25 287 1 2034 241 107 31 chr5 196305557 196306249 -6779283 + L1ME1 LINE L1 4669 5307 -859 4265 152 13 0 chr5 196306249 196306951 -6778581 + L1PB4 LINE L1 5446 6156 0 2034 241 107 31 chr5 196306951 196307644 -6777888 + L1ME1 LINE L1 5307 6161 -5 529 254 30 24 chr5 196307643 196307808 -6777724 + L1MC5 LINE L1 7763 7928 -33 * 10218 154 53 104 chr5 196307800 196308554 -6776978 + L1MB3 LINE L1 5 796 -5588 2291 84 0 11 chr5 196308554 196308900 -6776632 - AluY SINE Alu 0 343 1 10218 154 53 104 chr5 196308900 196309824 -6775708 + L1MB3 LINE L1 796 1765 -4619 1391 126 0 5 chr5 196309824 196310015 -6775517 + AluSx SINE Alu 1 190 -122 1303 12 12 6 chr5 196310015 196310176 -6775356 + (GAAA)n Simple_repeat Simple_repeat 4 165 0 10218 154 53 104 chr5 196310176 196310341 -6775191 + L1MB3 LINE L1 1764 1936 -4448 1973 129 4 0 chr5 196310341 196310612 -6774920 + AluSx SINE Alu 12 283 -29 10218 154 53 104 chr5 196310612 196311118 -6774414 + L1MB3 LINE L1 1936 2419 -3965 2231 208 18 6 chr5 196311116 196311612 -6773920 + L1MB3 LINE L1 3824 4325 -2057 * 4485 186 44 18 chr5 196311607 196313098 -6772434 + L1MB3 LINE L1 4900 6412 -7 422 286 120 6 chr5 196313291 196313466 -6772066 - MIR SINE MIR -32 230 36 199 200 0 0 chr5 196313907 196313942 -6771590 + L2 LINE L2 2571 2605 -709 250 224 40 104 chr5 196314348 196314473 -6771059 - L2 LINE L2 -346 2968 2852 1108 299 151 15 chr5 196315029 196315887 -6769645 + L2 LINE L2 2325 3313 0 412 243 136 124 chr5 196315923 196316024 -6769508 - HAL1 LINE L1 -110 2397 2299 1869 112 18 0 chr5 196316024 196316310 -6769222 - L1MA8 LINE L1 -7 6284 5994 412 243 136 124 chr5 196316310 196316426 -6769106 - HAL1 LINE L1 -208 2299 2186 3968 40 0 4 chr5 196316426 196316897 -6768635 + L1PA3 LINE L1 5684 6152 -3 412 243 136 124 chr5 196316897 196317346 -6768186 - HAL1 LINE L1 -321 2186 1722 606 211 81 25 chr5 196317458 196317619 -6767913 - MIR SINE MIR -66 196 27 198 262 0 0 chr5 196317628 196317670 -6767862 - L2 LINE L2 -18 3254 3213 715 304 9 5 chr5 196317716 196317940 -6767592 + L3 LINE CR1 1236 1460 -117 1446 182 12 102 chr5 196318020 196318421 -6767111 + MLT1A1 LTR MaLR 1 365 0 1067 309 92 31 chr5 196319268 196319406 -6766126 - MLT1K LTR MaLR 0 588 460 372 43 0 0 chr5 196319406 196319452 -6766080 + (TC)n Simple_repeat Simple_repeat 1 46 0 483 261 27 0 chr5 196319455 196319566 -6765966 + MER81 DNA DNA 1 114 0 1067 309 92 31 chr5 196319566 196319976 -6765556 - MLT1K LTR MaLR -129 459 2 260 340 11 43 chr5 196320746 196320931 -6764601 + L2 LINE L2 2896 3074 -198 206 330 10 10 chr5 196322272 196322369 -6763163 + (TGAA)n Simple_repeat Simple_repeat 1 97 0 208 315 120 0 chr5 196322630 196322722 -6762810 - MIR SINE MIR -111 151 49 253 214 0 43 chr5 196322822 196322892 -6762640 - MER4-int LTR ERV1 -5433 1165 1099 521 43 43 21 chr5 196322892 196322985 -6762547 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 372 317 49 12 chr5 196323488 196323652 -6761880 + MIR SINE MIR 22 191 -71 238 283 50 10 chr5 196324025 196324124 -6761408 + MIR SINE MIR 81 183 -79 525 238 14 28 chr5 196324683 196324826 -6760706 + MIR SINE MIR 37 177 -85 447 243 24 35 chr5 196324955 196325124 -6760408 + L1ME LINE L1 5604 5770 -351 439 292 37 6 chr5 196325268 196325429 -6760103 - MIR SINE MIR -10 252 87 297 284 21 11 chr5 196325636 196325731 -6759801 - MIR SINE MIR -97 111 16 209 152 0 0 chr5 196327092 196327125 -6758407 - L2 LINE L2 -17 3296 3264 1945 187 25 40 chr5 196327515 196327985 -6757547 + MLT1C LTR MaLR 3 465 -2 305 275 40 67 chr5 196328075 196328224 -6757308 + LTR16A1 LTR ERVL 4 148 -309 1621 187 47 106 chr5 196329926 196330859 -6754673 - L1PA12 LINE L1 -4137 3447 2572 204 337 12 12 chr5 196331136 196331219 -6754313 + MIR SINE MIR 47 129 -133 237 83 0 0 chr5 196331388 196331424 -6754108 + (TC)n Simple_repeat Simple_repeat 2 37 0 359 261 174 6 chr5 196332062 196332223 -6753309 + MIR SINE MIR 17 204 -58 437 162 38 0 chr5 196332383 196332488 -6753044 + Alu SINE Alu 202 310 0 2994 54 18 3 chr5 196332506 196332896 -6752636 + L1PA7 LINE L1 5759 6154 0 279 370 30 15 chr5 196332899 196333102 -6752430 + L1MC4a LINE L1 7079 7284 -524 1731 241 61 29 chr5 196333663 196334356 -6751176 - L1M4 LINE L1 -2580 3390 2676 243 261 0 0 chr5 196334486 196334555 -6750977 + A-rich Low_complexity Low_complexity 1 69 0 468 286 0 54 chr5 196334642 196334827 -6750705 + GA-rich Low_complexity Low_complexity 2 176 0 601 232 63 7 chr5 196334953 196335095 -6750437 - L1MDa LINE L1 -6377 163 14 230 243 133 40 chr5 196335123 196335296 -6750236 - L1MC/D LINE L1 -2350 5458 5270 335 275 22 28 chr5 196336065 196336243 -6749289 + A-rich Low_complexity Low_complexity 2 178 0 238 283 50 10 chr5 196336668 196336767 -6748765 + MIR SINE MIR 81 183 -79 5796 121 19 9 chr5 196338893 196339789 -6745743 + L1PA15 LINE L1 5256 6160 -5 1270 134 10 74 chr5 196340004 196340100 -6745432 + AluJo SINE Alu 14 115 -197 2195 175 59 2 chr5 196340100 196340505 -6745027 - MSTA LTR MaLR 0 428 1 1270 134 10 74 chr5 196340505 196340706 -6744826 + AluJo SINE Alu 115 292 -20 474 281 7 14 chr5 196341427 196341573 -6743959 - MIR SINE MIR -31 231 87 267 281 33 50 chr5 196342350 196342471 -6743061 - L1M4 LINE L1 -5759 132 14 278 341 218 0 chr5 196342471 196342641 -6742891 + L2 LINE L2 2874 3080 -233 2285 79 0 10 chr5 196342641 196342931 -6742601 + AluSq SINE Alu 1 287 -26 198 0 0 0 chr5 196342932 196342954 -6742578 + (CAAG)n Simple_repeat Simple_repeat 1 22 0 1751 110 0 53 chr5 196343439 196343758 -6741774 - AluSx SINE Alu -10 302 1 1414 189 111 40 chr5 196344880 196345250 -6740282 + MSTD LTR MaLR 1 396 0 4667 56 0 0 chr5 196345562 196346129 -6739403 - L1PA5 LINE L1 0 6154 5588 404 167 42 0 chr5 196346208 196346280 -6739252 - FLAM SINE Alu 0 133 59 313 160 67 27 chr5 196346911 196346986 -6738546 - MER106B DNA MER1_type -86 973 896 235 206 16 48 chr5 196346999 196347062 -6738470 - MER106A DNA MER1_type -174 62 2 409 269 106 26 chr5 196347824 196348051 -6737481 - MLT1L LTR MaLR -24 591 347 311 367 136 0 chr5 196348467 196348636 -6736896 + MER91A DNA MER1_type 5 196 0 223 298 51 51 chr5 196348807 196348965 -6736567 - L2 LINE L2 -205 3067 2910 1991 238 35 30 chr5 196349005 196349563 -6735969 - MER77 LTR ERV1 -7 598 64 405 339 96 36 chr5 196349918 196350169 -6735363 - L2 LINE L2 -11 3261 2996 1948 91 38 4 chr5 196350299 196350563 -6734969 + AluY SINE Alu 37 309 -2 2864 55 16 0 chr5 196350591 196350954 -6734578 + L1PA7 LINE L1 5759 6127 -27 1564 158 0 98 chr5 196351273 196351608 -6733924 + AluSx SINE Alu 3 304 -8 1317 279 54 5 chr5 196351823 196352213 -6733319 + MLT1I LTR MaLR 1 409 0 2138 92 0 43 chr5 196352568 196352873 -6732659 - AluY SINE Alu -19 292 1 737 253 11 11 chr5 196353278 196353452 -6732080 + MER5B DNA MER1_type 1 174 -4 194 297 110 11 chr5 196353999 196354090 -6731442 - MIR SINE MIR -117 145 46 2081 117 57 20 chr5 196354356 196354708 -6730824 - THE1C LTR MaLR 0 375 11 1816 147 9 47 chr5 196354761 196355080 -6730452 + AluJo SINE Alu 1 307 -5 414 110 41 0 chr5 196356055 196356128 -6729404 - AluJ/FRAM SINE Alu -5 307 232 2339 105 0 13 chr5 196357328 196357643 -6727889 - AluSx SINE Alu -1 311 1 588 200 0 0 chr5 196358111 196358211 -6727321 + Tigger2 DNA MER2_type 2590 2689 -29 10159 162 26 11 chr5 196358335 196360297 -6725235 + L1P LINE L1 3230 5221 -925 2062 99 0 68 chr5 196360665 196360987 -6724545 - AluSg SINE Alu -10 300 1 181 250 83 0 chr5 196360993 196361065 -6724467 - MIR SINE MIR -9 253 176 281 303 101 20 chr5 196361174 196361274 -6724258 - MIR SINE MIR -42 166 58 25 51 0 0 chr5 196361319 196361358 -6724174 + AT_rich Low_complexity Low_complexity 1 39 0 1948 203 116 15 chr5 196361912 196362655 -6722877 + L1M4 LINE L1 1254 2110 -4273 5152 143 30 7 chr5 196362700 196363575 -6721957 - Tigger3b DNA MER2_type 0 1231 337 443 189 100 22 chr5 196363594 196363684 -6721848 - FLAM_A SINE Alu -36 106 10 1802 153 34 34 chr5 196363688 196364040 -6721492 - Tigger3(Golem) DNA MER2_type -880 2149 1 421 207 36 9 chr5 196364040 196364151 -6721381 + L1M LINE L1 5267 5380 -791 555 210 51 7 chr5 196364311 196364449 -6721083 + L1M4 LINE L1 3873 4016 -2366 895 292 43 7 chr5 196364560 196364865 -6720667 + LTR16C LTR ERVL 165 480 -11 216 247 14 27 chr5 196365499 196365572 -6719960 - L2 LINE L2 0 3272 3201 1645 244 42 73 chr5 196365615 196366135 -6719397 + MLT1E LTR MaLR 90 593 0 292 234 108 45 chr5 196366434 196366545 -6718987 + MLT1J2 LTR MaLR 44 161 -289 1323 117 11 0 chr5 196366675 196366855 -6718677 - AluSc SINE Alu -127 182 1 1023 257 77 64 chr5 196366868 196367066 -6718466 - MLT2C2 LTR ERVL -2 462 268 1350 117 21 46 chr5 196367066 196367305 -6718227 - L1MA4 LINE L1 0 6300 6068 1023 257 77 64 chr5 196367305 196367562 -6717970 - MLT2C2 LTR ERVL -196 268 1 901 210 59 151 chr5 196368170 196368613 -6716919 - MLT1E LTR MaLR -102 491 90 1096 157 140 8 chr5 196368675 196368744 -6716788 + THE1C LTR MaLR 110 169 -206 423 0 0 0 chr5 196368744 196368791 -6716741 + (TC)n Simple_repeat Simple_repeat 1 47 0 1096 157 140 8 chr5 196368791 196368956 -6716576 + THE1C LTR MaLR 169 375 0 408 358 11 5 chr5 196369361 196369551 -6715981 - MIR SINE MIR -70 192 2 1352 208 171 73 chr5 196369972 196370535 -6714997 + MLT1E3 LTR MaLR 52 624 0 1089 280 134 14 chr5 196371147 196371579 -6713953 + LTR16C LTR ERVL 8 491 0 744 319 97 12 chr5 196371808 196372147 -6713385 + MLT1I LTR MaLR 42 409 0 529 281 20 46 chr5 196372662 196372858 -6712674 - LTR67 LTR ERVL -41 516 326 2267 148 82 25 chr5 196372873 196373278 -6712254 + MSTC LTR MaLR 1 428 0 299 318 103 52 chr5 196373678 196373911 -6711621 - LTR67 LTR ERVL -304 253 9 1887 165 19 48 chr5 196374313 196374689 -6710843 + MLT1A1 LTR MaLR 1 365 0 432 308 58 0 chr5 196375347 196375503 -6710029 + MIR SINE MIR 54 218 -44 261 241 81 0 chr5 196376432 196376519 -6709013 - L2 LINE L2 -5 3267 3174 295 168 10 158 chr5 196376555 196376656 -6708876 - L2 LINE L2 -35 3278 3193 2488 112 21 19 chr5 196377486 196377860 -6707672 + THE1C LTR MaLR 1 375 0 344 281 42 24 chr5 196377883 196378050 -6707482 - L1ME4a LINE L1 -5 6116 5947 522 207 152 14 chr5 196378475 196378620 -6706912 - MIR SINE MIR -11 251 87 290 245 163 10 chr5 196378595 196378693 -6706839 + MIR SINE MIR 23 135 -73 * 1973 102 3 57 chr5 196379444 196379758 -6705774 - AluSx SINE Alu -15 297 1 1538 173 21 28 chr5 196381028 196381317 -6704215 + AluJb SINE Alu 2 288 -24 656 24 12 0 chr5 196381330 196381412 -6704120 + (GGAAA)n Simple_repeat Simple_repeat 1 83 0 572 256 0 0 chr5 196382336 196382461 -6703071 - MIR SINE MIR -61 201 77 221 313 94 21 chr5 196384002 196384098 -6701434 + MIR SINE MIR 73 175 -87 1862 138 0 0 chr5 196385070 196385388 -6700144 + AluSx SINE Alu 1 318 0 348 291 26 26 chr5 196385406 196385523 -6700009 + MER5A DNA MER1_type 52 168 -21 944 281 29 0 chr5 196386176 196386422 -6699110 + MIR SINE MIR 9 261 -1 379 242 137 24 chr5 196386423 196386547 -6698985 - MIR SINE MIR -65 197 60 492 307 71 0 chr5 196386644 196386856 -6698676 + MIR SINE MIR 16 242 -20 2463 52 0 7 chr5 196386904 196387213 -6698319 + AluY SINE Alu 1 307 -4 410 139 42 0 chr5 196387402 196387474 -6698058 - MER58B DNA MER1_type -1 340 266 330 254 238 8 chr5 196388349 196388475 -6697057 + MIR SINE MIR 37 191 -71 438 304 71 53 chr5 196388529 196388907 -6696625 - L2 LINE L2 -5 3308 2924 1721 184 97 53 chr5 196388907 196389359 -6696173 + LTR8A LTR ERV1 256 727 0 2395 158 40 24 chr5 196389370 196389795 -6695737 + MSTB1 LTR MaLR 1 432 0 275 189 0 27 chr5 196389845 196389919 -6695613 + CT-rich Low_complexity Low_complexity 3 74 0 792 215 41 114 chr5 196389919 196390138 -6695394 + MLT1A2 LTR MaLR 194 374 0 224 345 35 0 chr5 196390254 196390341 -6695191 + L2 LINE L2 3134 3223 -49 729 273 38 5 chr5 196390355 196390564 -6694968 + L2 LINE L2 3091 3306 -7 38 22 0 0 chr5 196391056 196391101 -6694431 + AT_rich Low_complexity Low_complexity 1 45 0 235 272 53 70 chr5 196391648 196391762 -6693770 + MLT1K LTR MaLR 268 379 -209 311 0 26 0 chr5 196391887 196391926 -6693606 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 1468 145 67 22 chr5 196391928 196392080 -6693452 - AluJb SINE Alu -31 281 110 308 24 24 0 chr5 196392080 196392121 -6693411 + (TTTG)n Simple_repeat Simple_repeat 4 45 0 1468 145 67 22 chr5 196392121 196392237 -6693295 - AluJb SINE Alu -202 110 1 222 246 0 33 chr5 196392616 196392677 -6692855 + CT-rich Low_complexity Low_complexity 6 64 0 338 255 71 10 chr5 196392726 196392824 -6692708 + MIR SINE MIR 81 184 -78 347 257 88 9 chr5 196393939 196394052 -6691480 - MIR SINE MIR -70 192 71 214 188 31 78 chr5 196396121 196396185 -6689347 - L2 LINE L2 -16 3297 3237 584 300 61 13 chr5 196396902 196397132 -6688400 - MIR SINE MIR -16 246 6 248 338 61 43 chr5 196397261 196397664 -6687868 - L2 LINE L2 -221 3051 2643 1416 127 51 51 chr5 196397861 196398153 -6687379 + AluJo SINE Alu 19 310 -2 27 0 0 0 chr5 196398580 196398607 -6686925 + AT_rich Low_complexity Low_complexity 1 27 0 350 291 87 53 chr5 196399022 196399228 -6686304 - L1ME4a LINE L1 -18 6103 5891 2190 112 0 3 chr5 196399574 196399878 -6685654 - AluSc SINE Alu -6 303 1 2247 96 0 3 chr5 196400279 196400580 -6684952 - AluSq SINE Alu -13 300 1 1804 246 185 31 chr5 196400939 196401873 -6683659 + HAL1 LINE L1 967 2044 -463 338 299 101 30 chr5 196401964 196402275 -6683257 + L1MEc LINE L1 2111 2398 -3817 1057 192 34 10 chr5 196402278 196402486 -6683046 - MER58A DNA MER1_type -11 213 1 944 275 92 58 chr5 196402489 196402976 -6682556 + L2 LINE L2 2810 3313 0 212 272 97 9 chr5 196403290 196403404 -6682128 - MIR3 SINE MIR -3 205 82 338 290 129 26 chr5 196403892 196404047 -6681485 - MIR SINE MIR -6 256 86 361 313 0 10 chr5 196404066 196404162 -6681370 + MIR SINE MIR 30 124 -84 1051 216 5 0 chr5 196404164 196404372 -6681160 + MER3 DNA MER1_type 1 209 0 1229 324 48 14 chr5 196404386 196404828 -6680704 + MER115 DNA AcHobo 9 465 -228 199 311 66 53 chr5 196405784 196405935 -6679597 + L2 LINE L2 2932 3084 -188 680 213 71 30 chr5 196406997 196407166 -6678366 - MER5B DNA MER1_type -1 177 2 346 285 29 36 chr5 196407579 196407716 -6677816 - L1ME1 LINE L1 -17 6149 6014 860 268 141 7 chr5 196407716 196407985 -6677547 + LTR18A LTR ERVL 53 357 0 1543 167 4 0 chr5 196407991 196408237 -6677295 + HERVL18 LTR ERVL 1 247 -5800 2655 165 2 0 chr5 196408237 196408642 -6676890 + HERVL18 LTR ERVL 5642 6047 0 1047 274 122 9 chr5 196408643 196408964 -6676568 + LTR18A LTR ERVL 1 357 0 1158 267 45 21 chr5 196408975 196409353 -6676179 - L1MD1 LINE L1 -234 6008 5622 3394 134 16 12 chr5 196410150 196410648 -6674884 + Charlie3 DNA MER1_type 1 500 -2210 3200 100 38 4 chr5 196410642 196411092 -6674440 + Charlie3 DNA MER1_type 2242 2706 -4 * 232 297 268 9 chr5 196411839 196412030 -6673502 + MIR SINE MIR 8 242 -20 902 37 0 0 chr5 196412156 196412265 -6673267 + L1PA3 LINE L1 6047 6155 0 2188 109 0 6 chr5 196412356 196412668 -6672864 - AluSx SINE Alu -2 310 1 285 322 140 14 chr5 196412788 196412931 -6672601 + L2 LINE L2 3101 3261 -11 5694 172 19 19 chr5 196413416 196414443 -6671089 + L1MA10 LINE L1 5217 6239 -95 2328 181 34 7 chr5 196414443 196414858 -6670674 - MSTB LTR MaLR 0 426 1 5694 172 19 19 chr5 196414858 196414952 -6670580 + L1MA10 LINE L1 6239 6332 -2 2052 98 3 3 chr5 196415092 196415387 -6670145 + AluSc SINE Alu 1 295 -14 378 202 97 9 chr5 196415924 196416038 -6669494 - L1MC4 LINE L1 -1 8041 7918 5784 123 2 6 chr5 196416121 196416252 -6669280 - L1PA14 LINE L1 -3 6158 6028 2332 40 3 14 chr5 196416252 196416574 -6668958 - AluY SINE Alu 0 311 1 5784 123 2 6 chr5 196416574 196417703 -6667829 - L1PA14 LINE L1 -133 6028 4914 302 289 35 35 chr5 196417733 196417847 -6667685 - MIR SINE MIR -147 115 2 185 194 0 0 chr5 196417847 196417877 -6667655 + L2 LINE L2 3283 3312 -1 546 332 77 41 chr5 196418026 196418590 -6666942 - L2 LINE L2 -106 3207 2632 2225 164 5 35 chr5 196418590 196418700 -6666832 + MLT1B LTR MaLR 1 113 -277 3136 112 0 2 chr5 196418700 196419145 -6666387 - L1PB3 LINE L1 0 6154 5711 2225 164 5 35 chr5 196419145 196419436 -6666096 + MLT1B LTR MaLR 113 390 0 621 224 93 33 chr5 196419485 196419699 -6665833 - L2 LINE L2 -752 2562 2336 205 275 0 0 chr5 196419771 196419811 -6665721 - L2 LINE L2 -23 3249 3210 302 308 33 0 chr5 196420510 196420630 -6664902 - L1ME4a LINE L1 -204 5917 5794 2051 90 65 0 chr5 196421268 196421546 -6663986 + AluSx SINE Alu 1 296 -16 45 19 0 0 chr5 196421676 196421728 -6663804 + AT_rich Low_complexity Low_complexity 1 52 0 194 272 234 32 chr5 196422487 196422645 -6662887 + MIR SINE MIR 73 262 0 298 276 119 0 chr5 196422995 196423129 -6662403 + MIR SINE MIR 12 161 -101 259 289 58 33 chr5 196423130 196423251 -6662281 + L2 LINE L2 2910 3033 -280 524 355 66 30 chr5 196423296 196423733 -6661799 + L1ME4a LINE L1 107 559 -5837 1662 237 85 46 chr5 196423765 196424594 -6660938 + L1ME4a LINE L1 2731 3601 -2614 2491 60 3 0 chr5 196424594 196424895 -6660637 + AluY SINE Alu 1 302 -9 1662 237 85 46 chr5 196424895 196424982 -6660550 + L1ME4a LINE L1 3601 3683 -2532 323 237 134 52 chr5 196427175 196427369 -6658163 + L1ME4a LINE L1 5339 5548 -2329 1723 241 29 39 chr5 196427375 196427861 -6657671 + L1MD2 LINE L1 14 494 -6046 3183 236 40 31 chr5 196427904 196428824 -6656708 + L1MD2 LINE L1 621 1548 -4992 677 199 40 0 chr5 196428835 196429011 -6656521 + L1MD2 LINE L1 5582 5764 -776 806 151 0 0 chr5 196429017 196429143 -6656389 + LTR55 LTR ERV 1 126 -422 862 164 0 17 chr5 196429150 196429327 -6656205 + GA-rich Low_complexity Low_complexity 3 176 0 1319 214 19 58 chr5 196429336 196429751 -6655781 + LTR55 LTR ERV 143 541 -7 3367 182 59 7 chr5 196429761 196430486 -6655046 + L1MD2 LINE L1 5774 6536 -217 314 295 41 41 chr5 196431287 196431409 -6654123 + L1ME4a LINE L1 5645 5766 -424 460 240 8 16 chr5 196431738 196431859 -6653673 + LTR67 LTR ERVL 434 553 -4 398 292 20 10 chr5 196431863 196432065 -6653467 + L1ME4a LINE L1 5781 5984 -206 21 0 0 0 chr5 196432138 196432159 -6653373 + AT_rich Low_complexity Low_complexity 1 21 0 512 260 107 6 chr5 196432349 196432526 -6653006 - MIR SINE MIR -15 247 53 3660 49 0 0 chr5 196433607 196434053 -6651479 - L1PA4 LINE L1 -13 6142 5697 350 286 87 16 chr5 196434275 196434401 -6651131 + L2 LINE L2 3122 3256 -16 824 165 0 0 chr5 196434661 196434776 -6650756 + FLAM_C SINE Alu 7 121 -22 345 24 0 0 chr5 196434777 196434819 -6650713 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1849 178 92 7 chr5 196434887 196435309 -6650223 - MLT2C2 LTR ERVL -6 458 1 2319 92 10 0 chr5 196435309 196435601 -6649931 + AluSc SINE Alu 1 295 -14 2097 117 0 4 chr5 196435757 196436073 -6649459 - AluSc SINE Alu 0 315 1 209 267 93 0 chr5 196436123 196436198 -6649334 + MIR SINE MIR 117 198 -64 226 229 82 16 chr5 196436472 196436533 -6648999 - L2 LINE L2 -1 3312 3248 21 0 0 0 chr5 196437126 196437147 -6648385 + AT_rich Low_complexity Low_complexity 1 21 0 562 297 223 11 chr5 196437335 196437793 -6647739 - MLT1K LTR MaLR -31 557 3 369 301 26 18 chr5 196438274 196438387 -6647145 + MIR3 SINE MIR 10 123 -85 4549 58 0 0 chr5 196438945 196439512 -6646020 - L1PA5 LINE L1 0 6154 5588 865 160 0 15 chr5 196439593 196439724 -6645808 - FLAM_C SINE Alu -4 129 1 287 262 24 0 chr5 196439765 196439849 -6645683 - MER58B DNA MER1_type 0 341 256 456 205 76 66 chr5 196440002 196440239 -6645293 - MER106B DNA MER1_type 0 1059 2 326 269 106 26 chr5 196441001 196441228 -6644304 - MLT1L LTR MaLR -24 591 347 40905 33 22 2 chr5 196441420 196447448 -6638084 + L1PA2 LINE L1 1 6154 -1 905 219 16 0 chr5 196447475 196447658 -6637874 + MER5A DNA MER1_type 1 186 -3 2382 150 21 23 chr5 196447694 196448127 -6637405 + MSTB1 LTR MaLR 1 432 0 2076 128 3 14 chr5 196448449 196448739 -6636793 + AluSx SINE Alu 1 287 -25 1814 168 242 2 chr5 196448850 196449267 -6636265 - MLT2B1 LTR ERVL 0 520 4 1227 243 39 7 chr5 196449270 196449677 -6635855 + L1M4 LINE L1 2597 3016 -3130 5370 104 46 17 chr5 196449677 196450437 -6635095 - L1PA13 LINE L1 -5 6158 5370 1637 153 8 8 chr5 196450437 196450698 -6634834 - AluSx SINE Alu -5 307 47 5370 104 46 17 chr5 196450698 196450908 -6634624 - L1PA13 LINE L1 -793 5370 5168 1980 113 7 31 chr5 196450913 196451205 -6634327 - AluSx SINE Alu -11 301 17 323 299 73 43 chr5 196451207 196451371 -6634161 - L1M4 LINE L1 -2406 3740 3572 2553 182 67 11 chr5 196451464 196452031 -6633501 - L1MC4 LINE L1 -118 7924 7326 4764 224 103 28 chr5 196452111 196453016 -6632516 - L1ME1 LINE L1 -117 6049 5213 6834 47 1 0 chr5 196453016 196453854 -6631678 + L1PA6 LINE L1 5308 6146 -8 4764 224 103 28 chr5 196453854 196455481 -6630051 - L1ME1 LINE L1 -953 5213 3304 1837 192 28 35 chr5 196456281 196456744 -6628788 - MLT1D LTR MaLR 0 505 46 23 0 0 0 chr5 196456814 196456837 -6628695 + AT_rich Low_complexity Low_complexity 1 23 0 232 191 0 0 chr5 196456910 196456957 -6628575 + MLT1I LTR MaLR 80 126 -283 586 321 99 31 chr5 196457419 196458094 -6627438 - HAL1b LINE L1 -505 843 123 249 197 105 13 chr5 196458783 196458859 -6626673 + MLT1I LTR MaLR 43 125 -284 510 252 58 91 chr5 196459601 196459843 -6625689 + MIR SINE MIR 7 240 -22 1207 114 12 0 chr5 196459867 196460033 -6625499 - AluSx SINE Alu -14 298 131 210 143 0 0 chr5 196460035 196460084 -6625448 + (T)n Simple_repeat Simple_repeat 1 49 0 967 107 15 0 chr5 196460085 196460216 -6625316 - AluSx SINE Alu -180 133 1 457 275 27 89 chr5 196460484 196460948 -6624584 + MLT1L LTR MaLR 147 606 -9 533 335 73 4 chr5 196461137 196461382 -6624150 - MIR SINE MIR 0 262 1 254 349 60 30 chr5 196461526 196461758 -6623774 - L2 LINE L2 -482 2832 2594 180 0 0 0 chr5 196462162 196462182 -6623350 + (CA)n Simple_repeat Simple_repeat 1 20 0 237 360 56 0 chr5 196462571 196462696 -6622836 - MIR SINE MIR -64 198 67 675 308 67 0 chr5 196463390 196463614 -6621918 + MIR SINE MIR 4 242 -20 244 316 38 0 chr5 196463651 196463730 -6621802 - MIR SINE MIR -70 192 111 752 187 0 11 chr5 196464026 196464386 -6621146 + (TCCA)n Simple_repeat Simple_repeat 1 355 0 1895 138 65 34 chr5 196464808 196465162 -6620370 + MLT1A1 LTR MaLR 1 365 0 309 241 23 11 chr5 196466082 196466169 -6619363 + MIR SINE MIR 160 247 -15 186 297 189 27 chr5 196466508 196466619 -6618913 + MIR SINE MIR 68 196 -66 3078 226 68 38 chr5 196466738 196467906 -6617626 + L1MC3 LINE L1 2650 3853 -2293 523 161 125 0 chr5 196467903 196468015 -6617517 - L1M4 LINE L1 -1116 5030 4905 * 962 108 27 20 chr5 196468027 196468047 -6617485 - AluSg/x SINE Alu -2 310 292 5152 145 2 31 chr5 196468047 196469133 -6616399 + L1PA16 LINE L1 5082 6152 -14 962 108 27 20 chr5 196469133 196469260 -6616272 - AluSg/x SINE Alu -20 292 162 5190 198 41 27 chr5 196469260 196470433 -6615099 + L1MC3 LINE L1 3836 4026 -2120 1929 140 13 23 chr5 196470433 196470740 -6614792 + AluJo SINE Alu 1 304 -8 5190 198 41 27 chr5 196470740 196472138 -6613394 + L1MC3 LINE L1 4026 5403 -743 2724 120 0 9 chr5 196472149 196472582 -6612950 - L1PA16 LINE L1 -209 5957 5529 560 161 0 0 chr5 196472586 196472673 -6612859 + L1PA16 LINE L1 5975 6061 -105 275 164 15 0 chr5 196472674 196472741 -6612791 + L1PA16 LINE L1 6098 6165 -1 23 0 0 29 chr5 196472737 196472751 -6612781 + AT_rich Low_complexity Low_complexity 1 14 -19 * 2044 111 7 21 chr5 196472751 196473040 -6612492 + AluY SINE Alu 1 285 -26 23 0 0 29 chr5 196473040 196473059 -6612473 + AT_rich Low_complexity Low_complexity 14 33 0 6848 156 80 11 chr5 196473059 196474329 -6611203 + L1MC3 LINE L1 6423 7779 -6 1876 110 67 23 chr5 196474331 196474630 -6610902 - AluSx SINE Alu 0 312 1 230 319 0 0 chr5 196474687 196474759 -6610773 + CT-rich Low_complexity Low_complexity 4 75 0 22 0 0 0 chr5 196476463 196476485 -6609047 + AT_rich Low_complexity Low_complexity 1 22 0 489 148 50 30 chr5 196476634 196476735 -6608797 - L1MC3 LINE L1 -671 7114 7012 536 325 95 20 chr5 196476804 196477195 -6608337 - L1MC4a LINE L1 -1877 5931 5512 275 307 71 36 chr5 196477947 196478087 -6607445 - L2 LINE L2 0 3313 3169 653 338 17 30 chr5 196479143 196479380 -6606152 + MIR SINE MIR 15 248 -14 292 133 60 0 chr5 196479519 196479602 -6605930 + (TA)n Simple_repeat Simple_repeat 2 89 0 422 355 103 25 chr5 196479782 196480351 -6605181 - L2 LINE L2 -1 3271 2658 1596 95 5 5 chr5 196480420 196480642 -6604890 - AluSg/x SINE Alu 0 310 89 209 328 0 0 chr5 196480652 196480710 -6604822 - MIR3 SINE MIR -18 190 133 304 234 133 23 chr5 196481767 196481895 -6603637 - MIR SINE MIR -45 217 76 233 208 75 19 chr5 196482149 196482202 -6603330 - MIR SINE MIR -60 148 93 35 71 0 0 chr5 196484673 196484743 -6600789 + AT_rich Low_complexity Low_complexity 1 70 0 197 250 21 0 chr5 196488777 196488825 -6596707 - MIR SINE MIR -79 129 81 262 305 120 20 chr5 196489066 196489284 -6596248 + MIR SINE MIR 6 246 -16 2114 45 63 11 chr5 196489324 196489611 -6595921 + AluY SINE Alu 1 302 -9 2011 117 0 3 chr5 196489739 196490037 -6595495 - AluSx SINE Alu -15 297 1 1415 189 111 40 chr5 196491150 196491520 -6594012 + MSTD LTR MaLR 1 396 0 4251 239 86 80 chr5 196492463 196493342 -6592190 - L1MEc LINE L1 -4184 2212 1340 1891 151 0 0 chr5 196493342 196493666 -6591866 - AluSx SINE Alu 0 324 1 4251 239 86 80 chr5 196493666 196494307 -6591225 - L1MEc LINE L1 -5056 1340 705 463 228 10 0 chr5 196494307 196494408 -6591124 - U13 snRNA snRNA -2 102 1 4251 239 86 80 chr5 196494408 196495048 -6590484 - L1MEc LINE L1 -5691 705 36 615 256 38 0 chr5 196495391 196495524 -6590008 - L2 LINE L2 -3 3310 3173 356 278 9 26 chr5 196496020 196496135 -6589397 + MIR SINE MIR 36 148 -114 280 333 40 35 chr5 196496260 196496434 -6589098 + MLT1K LTR MaLR 15 189 -399 352 248 17 0 chr5 196496717 196496834 -6588698 + GA-rich Low_complexity Low_complexity 2 120 0 267 311 53 45 chr5 196497246 196497378 -6588154 - L2 LINE L2 -220 3052 2920 4186 87 7 0 chr5 196497539 196498089 -6587443 - MER41A LTR ERV1 0 554 1 231 203 81 27 chr5 196498389 196498463 -6587069 + L1 LINE L1 5134 5211 -935 910 67 58 0 chr5 196498463 196498583 -6586949 + AluY SINE Alu 1 127 -184 1081 114 6 6 chr5 196499178 196499372 -6586160 + L1PB2 LINE L1 5984 6177 0 4730 169 52 43 chr5 196499870 196500176 -6585356 + L1MB3 LINE L1 4888 5190 -993 2019 61 72 17 chr5 196500176 196500469 -6585063 + AluY SINE Alu 1 309 -2 4730 169 52 43 chr5 196500469 196500981 -6584551 + L1MB3 LINE L1 5190 5696 -487 1582 187 20 64 chr5 196500981 196501371 -6584161 - MER93b LTR ERV1 0 373 1 4730 169 52 43 chr5 196501371 196501688 -6583844 + L1MB3 LINE L1 5696 6030 -153 2283 174 28 0 chr5 196501688 196502080 -6583452 + MER57A LTR ERV1 1 403 0 4730 169 52 43 chr5 196502080 196502236 -6583296 + L1MB3 LINE L1 6030 6183 0 316 313 16 31 chr5 196502810 196502938 -6582594 - MIR SINE MIR -62 146 21 25 31 0 0 chr5 196503055 196503087 -6582445 + AT_rich Low_complexity Low_complexity 1 32 0 203 164 15 60 chr5 196503218 196503285 -6582247 + (TTAAA)n Simple_repeat Simple_repeat 5 68 0 1804 51 0 21 chr5 196503352 196503588 -6581944 + L1PA8 LINE L1 5940 6170 -2 385 341 8 8 chr5 196503752 196503878 -6581654 - MIR SINE MIR -110 152 27 671 301 100 17 chr5 196504227 196504441 -6581091 + MLT1I LTR MaLR 94 340 -69 1830 123 51 0 chr5 196504441 196504733 -6580799 + AluSx SINE Alu 1 307 -5 671 301 100 17 chr5 196504733 196504807 -6580725 + MLT1I LTR MaLR 340 406 -3 777 295 99 35 chr5 196504814 196505229 -6580303 - L2 LINE L2 -205 3067 2680 2166 175 16 75 chr5 196505229 196505426 -6580106 + MLT1C LTR MaLR 1 208 -259 2058 127 0 0 chr5 196505426 196505718 -6579814 + AluSc SINE Alu 1 292 -17 2166 175 16 75 chr5 196505718 196506016 -6579516 + MLT1C LTR MaLR 208 467 0 777 295 99 35 chr5 196506016 196506093 -6579439 - L2 LINE L2 -592 2680 2609 2084 119 3 3 chr5 196506093 196506403 -6579129 - AluSx SINE Alu -2 310 1 777 295 99 35 chr5 196506403 196506490 -6579042 - L2 LINE L2 -663 2609 2458 533 354 110 20 chr5 196506577 196506967 -6578565 - LTR16A LTR ERVL -8 442 18 345 316 26 0 chr5 196507468 196507582 -6577950 + LTR67 LTR ERVL 433 549 -8 1664 165 0 58 chr5 196508509 196508836 -6576696 - AluJo SINE Alu -3 309 2 1332 225 53 43 chr5 196508885 196509304 -6576228 + L1ME1 LINE L1 5740 6161 -5 438 270 132 17 chr5 196509483 196509657 -6575875 + MIR SINE MIR 63 256 -6 460 235 224 21 chr5 196510173 196510478 -6575054 - LTR50 LTR ERVL -2 793 387 620 233 242 5 chr5 196510522 196510737 -6574795 - LTR50 LTR ERVL -526 269 4 237 276 26 0 chr5 196510760 196510836 -6574696 - MLT1L LTR MaLR -1 614 537 211 169 0 34 chr5 196511049 196511108 -6574424 + (TA)n Simple_repeat Simple_repeat 1 57 0 773 61 0 0 chr5 196511126 196511225 -6574307 - L1PA10 LINE L1 -2 6166 6068 1180 201 84 0 chr5 196511227 196511500 -6574032 + MER63C DNA MER1_type 73 368 -562 412 274 55 133 chr5 196512017 196512364 -6573168 + L1ME4a LINE L1 4914 5233 -913 443 298 85 31 chr5 196512389 196512697 -6572835 + L1ME4a LINE L1 5314 5645 -526 385 284 9 26 chr5 196513469 196513585 -6571947 + MER91A DNA MER1_type 2 115 -81 802 265 164 37 chr5 196513677 196514150 -6571382 + L2 LINE L2 2777 3313 0 1102 80 0 7 chr5 196514523 196514674 -6570858 + L1PA6 LINE L1 5999 6148 -6 807 207 101 34 chr5 196514685 196514922 -6570610 + L1ME4a LINE L1 5677 5929 -235 420 141 0 0 chr5 196514974 196515038 -6570494 - MADE1 DNA Mariner -5 75 12 226 200 20 20 chr5 196515038 196515088 -6570444 - L2 LINE L2 -240 3073 3024 243 191 0 21 chr5 196515254 196515301 -6570231 + LTR67 LTR ERVL 142 187 -370 607 248 214 58 chr5 196515439 196515565 -6569967 - L2 LINE L2 -43 3270 3165 1761 170 10 6 chr5 196515565 196515876 -6569656 - AluJb SINE Alu 0 312 1 607 248 214 58 chr5 196515876 196516259 -6569273 - L2 LINE L2 -148 3165 2692 2101 148 36 0 chr5 196516318 196516648 -6568884 + MLT2C1 LTR ERVL 1 342 -55 229 203 29 14 chr5 196516652 196516721 -6568811 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 508 262 110 96 chr5 196517061 196517173 -6568359 + L2 LINE L2 3023 3132 -181 2044 110 14 0 chr5 196517173 196517464 -6568068 - AluSp SINE Alu -18 295 1 508 262 110 96 chr5 196517464 196517633 -6567899 + L2 LINE L2 3132 3308 -5 494 322 44 22 chr5 196517949 196518176 -6567356 - MIR SINE MIR -24 238 7 316 229 168 8 chr5 196518257 196518388 -6567144 + L1ME4a LINE L1 5968 6119 -2 1985 101 0 0 chr5 196518394 196518661 -6566871 + AluSc SINE Alu 1 267 -42 299 221 7 125 chr5 196519308 196519444 -6566088 - MLT1K LTR MaLR -73 515 396 263 188 152 80 chr5 196519535 196519647 -6565885 - MLT1K LTR MaLR -299 289 170 1480 236 72 61 chr5 196519750 196520276 -6565256 + MLT1H LTR MaLR 18 549 0 1492 173 40 4 chr5 196520529 196520801 -6564731 - AluJb SINE Alu -30 282 1 248 256 71 78 chr5 196521169 196521450 -6564082 - L1M4 LINE L1 -1370 4776 4498 430 286 0 88 chr5 196521480 196521651 -6563881 + L2 LINE L2 2571 2726 -588 332 263 205 13 chr5 196522729 196522885 -6562647 - MIR SINE MIR 0 262 77 506 283 120 33 chr5 196522910 196523186 -6562346 + L2 LINE L2 3013 3312 -1 2586 34 0 0 chr5 196523597 196523891 -6561641 + AluY SINE Alu 1 294 -17 2228 85 26 13 chr5 196524785 196525090 -6560442 - AluSg SINE Alu 0 310 2 225 258 210 24 chr5 196525503 196525627 -6559905 + MIR SINE MIR 80 226 -36 380 280 83 30 chr5 196526161 196526293 -6559239 - MIR SINE MIR -76 186 48 746 183 8 8 chr5 196528216 196528336 -6557196 - FLAM_A SINE Alu -12 121 2 989 143 97 25 chr5 196528714 196529100 -6556432 - MLT1D LTR MaLR 0 505 56 274 211 35 0 chr5 196529156 196529213 -6556319 - MLT1D LTR MaLR -444 61 3 329 257 119 0 chr5 196529810 196529919 -6555613 + MIR3 SINE MIR 68 189 -19 1849 144 3 50 chr5 196529958 196530278 -6555254 + AluJb SINE Alu 1 305 -7 350 249 32 51 chr5 196530659 196530784 -6554748 + MER5A DNA MER1_type 53 175 -3 2229 238 123 35 chr5 196530979 196531779 -6553753 + L2 LINE L2 2018 2922 -391 2445 61 14 0 chr5 196531779 196532076 -6553456 - AluSp SINE Alu -12 301 1 2229 238 123 35 chr5 196532076 196532227 -6553305 + L2 LINE L2 2922 3058 -255 481 205 0 0 chr5 196532228 196532311 -6553221 + AluJb SINE Alu 138 220 -92 361 238 52 117 chr5 196532316 196532348 -6553184 + L2 LINE L2 3089 3122 -191 194 0 39 0 chr5 196532348 196532374 -6553158 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 361 238 52 117 chr5 196532374 196532572 -6552960 + L2 LINE L2 3122 3304 -9 323 311 49 16 chr5 196533148 196533270 -6552262 - MER5B DNA MER1_type 0 178 53 1728 179 80 16 chr5 196533505 196533869 -6551663 - LTR65 LTR ERV1 -282 387 1 484 205 135 57 chr5 196534310 196534539 -6550993 + L1ME4a LINE L1 5855 6101 -20 1797 139 3 52 chr5 196534936 196535260 -6550272 - AluJo SINE Alu 0 312 5 492 187 172 113 chr5 196536313 196536451 -6549081 - MER58C DNA MER1_type -2205 215 60 2339 67 0 23 chr5 196536451 196536750 -6548782 + AluY SINE Alu 2 293 -18 492 187 172 113 chr5 196536750 196536814 -6548718 - MER58C DNA MER1_type -2360 60 1 184 237 51 17 chr5 196536917 196536976 -6548556 + MIR3 SINE MIR 13 73 -135 821 208 175 0 chr5 196537285 196537468 -6548064 - MER58C DNA MER1_type 0 215 1 347 304 90 90 chr5 196537509 196537944 -6547588 + HAL1b LINE L1 118 552 -796 2132 121 0 13 chr5 196537944 196538251 -6547281 + AluSq SINE Alu 1 303 -10 347 304 90 90 chr5 196538251 196538356 -6547176 + HAL1b LINE L1 552 661 -687 3749 130 10 42 chr5 196538356 196538925 -6546607 + L1MB3 LINE L1 5582 6131 -52 2317 99 0 0 chr5 196538925 196539219 -6546313 + AluSx SINE Alu 1 294 -18 3749 130 10 42 chr5 196539219 196539270 -6546262 + L1MB3 LINE L1 6131 6182 -1 347 304 90 90 chr5 196539270 196539330 -6546202 + HAL1b LINE L1 660 719 -629 2305 78 10 3 chr5 196539382 196539677 -6545855 - AluSp SINE Alu -16 297 1 1195 77 26 0 chr5 196539708 196539863 -6545669 + AluSg/x SINE Alu 135 293 -19 2005 133 14 3 chr5 196540374 196540668 -6544864 - AluSx SINE Alu -15 297 1 2251 110 0 3 chr5 196541126 196541435 -6544097 + AluSq SINE Alu 1 308 -5 286 220 73 37 chr5 196541630 196541739 -6543793 + L1ME1 LINE L1 2989 3101 -3045 623 263 146 24 chr5 196541763 196541976 -6543556 - MIR SINE MIR -22 240 2 5336 209 64 83 chr5 196542045 196542452 -6543080 + L1ME1 LINE L1 3196 3609 -2569 2355 94 0 0 chr5 196542452 196542749 -6542783 + AluSx SINE Alu 1 297 -15 5336 209 64 83 chr5 196542749 196543386 -6542146 + L1ME1 LINE L1 3609 4257 -1921 2194 112 7 10 chr5 196543386 196543690 -6541842 + AluSq SINE Alu 1 303 -10 5336 209 64 83 chr5 196543690 196543882 -6541650 + L1ME1 LINE L1 4257 4451 -1727 513 0 0 0 chr5 196543882 196543939 -6541593 + (CA)n Simple_repeat Simple_repeat 2 58 0 5336 209 64 83 chr5 196543939 196544548 -6540984 + L1ME1 LINE L1 4451 5025 -1153 2447 82 0 0 chr5 196544548 196544851 -6540681 - AluY SINE Alu -7 304 2 5336 209 64 83 chr5 196544851 196545279 -6540253 + L1ME1 LINE L1 5025 5460 -718 3236 158 48 78 chr5 196545294 196546007 -6539525 - LTR8 LTR ERV1 0 691 1 2125 112 0 3 chr5 196546042 196546351 -6539181 + AluSp SINE Alu 1 308 0 1147 219 68 49 chr5 196546351 196546726 -6538806 + L1ME1 LINE L1 5767 6161 -5 384 299 147 29 chr5 196546756 196547104 -6538428 + L1ME4a LINE L1 3604 3992 -2154 2275 103 3 3 chr5 196547205 196547505 -6538027 + AluSq SINE Alu 1 300 -13 228 304 14 0 chr5 196547524 196547593 -6537939 + GA-rich Low_complexity Low_complexity 2 71 0 2175 111 3 0 chr5 196547777 196548075 -6537457 + AluSx SINE Alu 1 299 -13 2295 79 0 0 chr5 196548235 196548512 -6537020 - AluY SINE Alu -34 277 1 256 300 121 54 chr5 196548603 196548737 -6536795 + L1ME4a LINE L1 4496 4620 -1526 1993 127 0 7 chr5 196548737 196549020 -6536512 + AluSq SINE Alu 1 281 -32 324 0 0 0 chr5 196549022 196549058 -6536474 + (TAA)n Simple_repeat Simple_repeat 2 37 0 256 300 121 54 chr5 196549058 196549233 -6536299 + L1ME4a LINE L1 4620 4829 -1317 2151 120 10 3 chr5 196549302 196549602 -6535930 - AluSq SINE Alu -11 302 1 244 310 21 56 chr5 196550001 196550143 -6535389 + L1ME4a LINE L1 5682 5818 -1990 2181 116 3 0 chr5 196550155 196550448 -6535084 - AluSg SINE Alu -16 294 1 1294 225 156 17 chr5 196550448 196550852 -6534680 - MLT1C LTR MaLR -2 465 6 323 335 103 4 chr5 196550866 196551129 -6534403 + L1ME4a LINE L1 5830 6118 -3 1894 162 7 7 chr5 196551175 196551477 -6534055 + AluJo SINE Alu 1 302 -10 2021 129 16 29 chr5 196551707 196552018 -6533514 - AluJb SINE Alu -5 307 1 2225 111 3 0 chr5 196552129 196552418 -6533114 - AluSc SINE Alu -19 290 1 451 243 0 0 chr5 196552783 196552886 -6532646 + L1MA7 LINE L1 6164 6266 -25 421 256 147 6 chr5 196553306 196553462 -6532070 - MIR SINE MIR -12 250 73 198 0 0 0 chr5 196555325 196555347 -6530185 + (TC)n Simple_repeat Simple_repeat 1 22 0 316 332 0 27 chr5 196555774 196555961 -6529571 + L1MC5 LINE L1 7730 7911 -50 2188 95 20 7 chr5 196556503 196556808 -6528724 + AluSx SINE Alu 2 310 -2 717 265 195 23 chr5 196557133 196557717 -6527815 - L2 LINE L2 -75 3238 2566 1632 165 36 7 chr5 196558511 196558790 -6526742 - AluJb SINE Alu -25 287 1 417 214 5 96 chr5 196559068 196559168 -6526364 - MIR SINE MIR -54 154 76 3779 133 4 4 chr5 196559168 196559695 -6525837 - MER1A DNA MER1_type 0 527 1 417 214 5 96 chr5 196559695 196559763 -6525769 - MIR SINE MIR -132 76 3 327 348 49 57 chr5 196561857 196562101 -6523431 - L2 LINE L2 -1 3271 3030 2459 225 135 17 chr5 196562217 196563284 -6522248 + L1ME1 LINE L1 4969 6306 -28 2387 109 0 6 chr5 196563340 196563651 -6521881 - AluSc SINE Alu 0 309 1 288 154 0 0 chr5 196563678 196563730 -6521802 + (TA)n Simple_repeat Simple_repeat 2 53 0 289 285 47 75 chr5 196564852 196565066 -6520466 - MIR SINE MIR -10 252 45 21 36 0 0 chr5 196565474 196565502 -6520030 + AT_rich Low_complexity Low_complexity 1 28 0 221 363 75 7 chr5 196565943 196566089 -6519443 - MIR SINE MIR -75 187 32 846 127 0 0 chr5 196567487 196567605 -6517927 + AluSg/x SINE Alu 183 300 -12 594 0 0 0 chr5 196567605 196567671 -6517861 + (TA)n Simple_repeat Simple_repeat 2 67 0 445 240 47 5 chr5 196567827 196567979 -6517553 - L1ME3A LINE L1 -310 5860 5753 981 284 100 20 chr5 196567982 196568631 -6516901 + L1M4 LINE L1 2934 3634 -2512 197 213 113 50 chr5 196568780 196568860 -6516672 + MIR SINE MIR 104 188 -74 215 233 0 0 chr5 196568895 196568938 -6516594 + (CAT)n Simple_repeat Simple_repeat 3 45 0 1701 172 7 23 chr5 196569110 196569413 -6516119 - AluJo SINE Alu -14 298 1 323 239 35 18 chr5 196569573 196569686 -6515846 + L1ME4a LINE L1 5987 6101 -20 1641 155 81 60 chr5 196571352 196571414 -6514118 - MER2 DNA MER2_type 0 344 285 2379 41 41 7 chr5 196571414 196571707 -6513825 - AluY SINE Alu -8 303 1 1641 155 81 60 chr5 196571707 196571979 -6513553 - MER2 DNA MER2_type -59 285 3 2431 74 0 3 chr5 196572553 196572851 -6512681 + AluSp SINE Alu 1 297 -16 398 314 57 48 chr5 196573763 196573992 -6511540 + MIR SINE MIR 20 250 -12 459 179 257 14 chr5 196574456 196574596 -6510936 + MER5A DNA MER1_type 10 183 -6 370 160 53 40 chr5 196574762 196574837 -6510695 + L2 LINE L2 3199 3274 -39 264 277 192 7 chr5 196575122 196575244 -6510288 - MIR SINE MIR -58 150 55 2467 97 0 0 chr5 196575244 196575555 -6509977 - AluY SINE Alu 0 311 1 264 277 192 7 chr5 196575555 196575569 -6509963 - MIR SINE MIR -153 55 45 816 203 68 0 chr5 196575919 196576096 -6509436 + MER5A DNA MER1_type 1 189 0 486 314 94 14 chr5 196576096 196576319 -6509213 + MIR SINE MIR 17 257 -5 449 294 90 19 chr5 196576348 196576559 -6508973 + L1ME4a LINE L1 5473 5698 -2110 2326 92 0 0 chr5 196576714 196577007 -6508525 + AluY SINE Alu 3 295 -16 513 216 160 5 chr5 196577223 196577417 -6508115 + L1ME4a LINE L1 5894 6117 -4 455 279 52 0 chr5 196578436 196578572 -6506960 + MIR SINE MIR 54 196 -66 2787 50 3 0 chr5 196578633 196578974 -6506558 - L1PA6 LINE L1 -1 6153 5812 24 0 0 0 chr5 196579254 196579278 -6506254 + AT_rich Low_complexity Low_complexity 1 24 0 426 311 36 6 chr5 196579899 196580066 -6505466 + MER5B DNA MER1_type 7 178 0 524 240 65 0 chr5 196580271 196580425 -6505107 - MIR SINE MIR -70 192 29 1574 153 54 34 chr5 196580846 196581140 -6504392 + AluJo SINE Alu 1 300 -12 526 271 59 56 chr5 196581330 196581636 -6503896 - L1MC4a LINE L1 -1902 5906 5600 2319 109 0 0 chr5 196581639 196581943 -6503589 - AluY SINE Alu -7 304 1 492 301 29 17 chr5 196581997 196582170 -6503362 - MIR SINE MIR -17 245 71 401 296 40 8 chr5 196582613 196582738 -6502794 + L2 LINE L2 2917 3045 -227 977 164 0 0 chr5 196582953 196583105 -6502427 + AluSg/x SINE Alu 151 302 -8 223 224 0 0 chr5 196583297 196583346 -6502186 + L2 LINE L2 3224 3272 0 515 244 128 55 chr5 196583795 196584069 -6501463 - MLT1H LTR MaLR -8 541 248 1996 146 3 0 chr5 196584359 196584653 -6500879 + AluSx SINE Alu 1 295 -17 464 280 61 56 chr5 196584987 196585201 -6500331 + LTR16B LTR ERVL 10 224 -240 460 320 32 0 chr5 196585301 196585457 -6500075 - MIR SINE MIR -8 254 94 506 230 65 38 chr5 196586209 196586419 -6499113 + MIR SINE MIR 45 261 -1 388 273 182 13 chr5 196586453 196586607 -6498925 - LTR16C LTR ERVL -42 449 270 426 236 155 6 chr5 196587011 196587185 -6498347 - MIR SINE MIR -14 248 49 2299 103 3 0 chr5 196587330 196587632 -6497900 + AluSx SINE Alu 1 303 -9 3833 153 55 22 chr5 196587714 196588408 -6497124 + LTR62 LTR ERVK 1 717 -2 310 194 45 0 chr5 196588472 196588539 -6496993 - MER94 DNA DNA -64 70 1 223 270 163 38 chr5 196588583 196588746 -6496786 - MIR SINE MIR -66 142 16 216 219 31 0 chr5 196588751 196588815 -6496717 + (TTCA)n Simple_repeat Simple_repeat 3 68 0 604 121 0 0 chr5 196588903 196588994 -6496538 + AluJ/FRAM SINE Alu 222 312 0 683 223 120 73 chr5 196589004 196589455 -6496077 + LTR48 LTR ERV1 217 583 -2 3813 148 56 36 chr5 196589482 196589629 -6495903 - MER50 LTR ERV1 -23 711 568 2303 102 16 0 chr5 196589629 196589933 -6495599 + AluSg SINE Alu 1 309 -1 3813 148 56 36 chr5 196589933 196590299 -6495233 - MER50 LTR ERV1 -166 568 178 2428 65 0 13 chr5 196590299 196590607 -6494925 - AluY SINE Alu -7 304 1 3813 148 56 36 chr5 196590607 196590787 -6494745 - MER50 LTR ERV1 -556 178 3 376 283 120 27 chr5 196590944 196591128 -6494404 + MIR SINE MIR 48 248 -14 233 79 79 0 chr5 196592009 196592047 -6493485 - MIR SINE MIR -111 151 111 276 170 0 0 chr5 196592135 196592188 -6493344 + GA-rich Low_complexity Low_complexity 3 55 0 2582 129 40 89 chr5 196592302 196592854 -6492678 - LTR45 LTR ERV1 0 525 1 1941 123 0 63 chr5 196592897 196593215 -6492317 + AluSx SINE Alu 1 298 -14 250 81 0 0 chr5 196593592 196593629 -6491903 + LTR54 LTR ERV1 2 38 -472 1576 196 39 29 chr5 196593642 196593953 -6491579 + MER57-int LTR ERV1 3763 4076 -795 1785 238 26 79 chr5 196594110 196594707 -6490825 + MER57-int LTR ERV1 4171 7145 -392 1211 139 39 16 chr5 196594717 196595122 -6490410 + LTR54 LTR ERV1 23 495 -15 2336 109 0 3 chr5 196595211 196595514 -6490018 - AluSp SINE Alu -11 302 1 455 260 51 85 chr5 196595571 196595806 -6489726 - MER67A LTR ERV1 0 543 317 284 355 8 8 chr5 196595834 196595958 -6489574 - MER67B LTR ERV1 -500 161 38 2365 101 3 0 chr5 196596080 196596388 -6489144 + AluSx SINE Alu 1 309 -3 945 226 143 11 chr5 196596390 196596535 -6488997 + LTR37A LTR ERV1 32 157 -269 354 23 0 0 chr5 196596535 196596578 -6488954 + (CA)n Simple_repeat Simple_repeat 2 44 0 945 226 143 11 chr5 196596578 196596781 -6488751 + LTR37A LTR ERV1 157 426 0 2371 99 0 3 chr5 196597137 196597441 -6488091 + AluSg SINE Alu 1 303 -7 682 221 98 0 chr5 196597443 196597606 -6487926 + AluJo/FRAM SINE Alu 130 308 -4 946 193 115 30 chr5 196597820 196598254 -6487278 + LTR54B LTR ERV1 1 494 -4 1440 206 51 33 chr5 196598265 196598600 -6486932 - MER61A LTR ERV1 -2 341 1 714 298 68 28 chr5 196598606 196598928 -6486604 + MER31-int LTR ERV1 1909 2243 -4088 478 241 58 7 chr5 196598899 196599036 -6486496 + MER31-int LTR ERV1 329 472 -7065 * 1288 156 37 138 chr5 196599189 196599648 -6485884 + MER31-int LTR ERV1 468 3298 -4239 2280 115 0 7 chr5 196599708 196600013 -6485519 + AluSc SINE Alu 1 303 -6 483 177 53 25 chr5 196600082 196600216 -6485316 + MER31-int LTR ERV1 858 2644 -3687 325 222 0 0 chr5 196600216 196600276 -6485256 + MER31A LTR ERV1 26 85 -400 1749 192 26 0 chr5 196600276 196600658 -6484874 - MER54A LTR ERVL 0 901 1 275 203 392 0 chr5 196600677 196600751 -6484781 + MER31-int LTR ERV1 772 874 -4062 2334 88 0 0 chr5 196600812 196601117 -6484415 + AluY SINE Alu 1 305 -6 2068 162 71 27 chr5 196601170 196601577 -6483955 - MER61B LTR ERV1 0 425 1 2356 99 0 10 chr5 196601609 196601923 -6483609 - AluSx SINE Alu -1 311 1 2030 118 14 3 chr5 196602679 196602975 -6482557 - AluSq SINE Alu -14 299 1 1100 223 48 0 chr5 196603759 196604010 -6481522 - AluJo SINE Alu -38 274 12 2092 117 3 16 chr5 196605705 196606012 -6479520 - AluSq SINE Alu -10 303 1 213 288 0 15 chr5 196606530 196606596 -6478936 + L3 LINE CR1 1390 1454 -123 526 265 49 8 chr5 196606882 196607059 -6478473 - MIR SINE MIR -64 144 4 4628 167 53 11 chr5 196607473 196608775 -6476757 - L1PBa LINE L1 -3064 3798 2440 196 236 18 0 chr5 196608878 196608933 -6476599 - MIR SINE MIR -65 197 142 682 272 79 104 chr5 196608933 196609452 -6476080 + MLT1J LTR MaLR 1 506 -5 3557 246 20 61 chr5 196611125 196612114 -6473418 + MLT-int LTR MaLR 420 1368 -367 1438 116 0 5 chr5 196612123 196612312 -6473220 + AluSc SINE Alu 1 188 -121 341 269 39 45 chr5 196612488 196612644 -6472888 + MLT1L LTR MaLR 447 601 -14 2484 73 3 10 chr5 196613208 196613521 -6472011 + AluY SINE Alu 1 311 0 306 253 60 12 chr5 196613523 196613606 -6471926 - MER103 DNA DNA -78 88 2 386 324 0 0 chr5 196614804 196614983 -6470549 + A-rich Low_complexity Low_complexity 1 179 0 329 309 170 5 chr5 196615618 196615806 -6469726 - MIR SINE MIR -24 238 20 608 24 0 37 chr5 196616060 196616142 -6469390 + L1P LINE L1 35 113 -6033 357 320 16 16 chr5 196617004 196617129 -6468403 - MIR SINE MIR -118 144 20 243 271 98 33 chr5 196617778 196617900 -6467632 + MIR SINE MIR 32 161 -101 255 217 29 14 chr5 196618762 196618831 -6466701 - MIR SINE MIR -17 245 176 6557 101 13 13 chr5 196618950 196619967 -6465565 - L1P LINE L1 -4210 1936 920 185 32 32 32 chr5 196620143 196620174 -6465358 + L2 LINE L2 3268 3298 -15 995 157 65 61 chr5 196621395 196621479 -6464053 + MER50 LTR ERV1 481 563 -171 2131 94 30 0 chr5 196621479 196621778 -6463754 - AluSg SINE Alu -2 308 1 995 157 65 61 chr5 196621778 196621923 -6463609 + MER50 LTR ERV1 563 711 -23 478 195 123 89 chr5 196621949 196622400 -6463132 - LTR48 LTR ERV1 -2 574 217 193 147 0 0 chr5 196623103 196623137 -6462395 - L2 LINE L2 -16 3297 3264 * 376 245 73 60 chr5 196623131 196623282 -6462250 - MIR SINE MIR -98 164 12 238 277 21 43 chr5 196623474 196623568 -6461964 - MIR3 SINE MIR -6 202 111 189 121 0 0 chr5 196623691 196623724 -6461808 + (A)n Simple_repeat Simple_repeat 1 33 0 196 362 0 0 chr5 196624752 196624821 -6460711 + MIR SINE MIR 75 143 -65 206 305 0 0 chr5 196624829 196624888 -6460644 - MIR SINE MIR -1 261 203 248 333 83 8 chr5 196624897 196625029 -6460503 + L3 LINE CR1 1170 1311 -266 465 300 82 5 chr5 196625042 196625262 -6460270 + MIR SINE MIR 20 256 -6 282 329 63 28 chr5 196625734 196625877 -6459655 - L2 LINE L2 -287 3026 2879 324 255 114 40 chr5 196625979 196626128 -6459404 - MIR SINE MIR -31 231 72 203 207 30 5 chr5 196626456 196626530 -6459002 + MIR SINE MIR 68 143 -65 225 272 196 25 chr5 196626594 196626752 -6458780 - MIR SINE MIR -6 256 72 250 200 50 0 chr5 196626973 196627033 -6458499 + MLT1H1 LTR MaLR 484 546 -9 245 270 26 72 chr5 196627064 196627216 -6458316 + L2 LINE L2 3088 3232 -81 411 291 25 60 chr5 196627349 196627548 -6457984 - MLT1L LTR MaLR -150 465 274 195 220 40 0 chr5 196628141 196628191 -6457341 + L2 LINE L2 3205 3256 -16 189 268 268 0 chr5 196628868 196628950 -6456582 + L2 LINE L2 3205 3308 -5 14462 27 4 1 chr5 196629709 196631436 -6454096 - L1P LINE L1 -2921 3225 1494 7710 15 9 1 chr5 196631556 196632668 -6452864 + L1PA2 LINE L1 5027 6153 -2 23 54 0 0 chr5 196632668 196632705 -6452827 + AT_rich Low_complexity Low_complexity 1 37 0 2515 72 0 3 chr5 196633569 196633874 -6451658 - AluY SINE Alu -7 304 1 34 0 0 0 chr5 196633884 196633918 -6451614 + AT_rich Low_complexity Low_complexity 1 34 0 1108 251 58 15 chr5 196634172 196634498 -6451034 + MLT1C LTR MaLR 125 464 -3 510 261 131 7 chr5 196634513 196634666 -6450866 + MER117 DNA MER1_type 25 196 -1 1780 60 4 17 chr5 196635464 196635698 -6449834 + AluY SINE Alu 79 309 -2 286 146 0 0 chr5 196635718 196635766 -6449766 + MER57-int LTR ERV1 1137 1184 -3687 1629 136 53 8 chr5 196635780 196636045 -6449487 + AluJb SINE Alu 11 287 -25 613 184 74 134 chr5 196636063 196636191 -6449341 + MER57-int LTR ERV1 1095 1229 -3707 2080 90 3 47 chr5 196636191 196636542 -6448990 - AluSc SINE Alu 0 309 1 613 184 74 134 chr5 196636542 196636575 -6448957 + MER57-int LTR ERV1 1229 1262 -3674 3695 131 22 90 chr5 196636575 196637317 -6448215 - LTR8 LTR ERV1 0 691 1 613 184 74 134 chr5 196637317 196637524 -6448008 + MER57-int LTR ERV1 1262 1384 -3552 2403 89 3 3 chr5 196637524 196637837 -6447695 + AluSq SINE Alu 1 313 0 613 184 74 134 chr5 196637837 196637937 -6447595 + MER57-int LTR ERV1 1384 1488 -3448 667 180 9 0 chr5 196638001 196638112 -6447420 + AluJ SINE Alu 2 113 -199 1872 219 156 25 chr5 196638115 196638755 -6446777 + MER50 LTR ERV1 10 733 -1 1128 186 0 19 chr5 196638755 196638965 -6446567 + AluJ SINE Alu 106 311 -1 772 236 74 69 chr5 196639063 196639928 -6445604 + MER57-int LTR ERV1 1719 2571 -2552 526 190 41 8 chr5 196639930 196640051 -6445481 + MER57-int LTR ERV1 2469 2593 -2343 1183 219 85 43 chr5 196640063 196640391 -6445141 - LTR47B LTR ERVL -2 441 100 1122 114 0 18 chr5 196640392 196640558 -6444974 + AluSg/x SINE Alu 133 295 -15 1278 194 131 99 chr5 196640657 196640782 -6444750 + MER57-int LTR ERV1 2611 2731 -2205 2333 94 0 0 chr5 196640782 196641080 -6444452 - AluSg SINE Alu -12 298 1 2399 71 3 0 chr5 196641084 196641398 -6444134 - AluSp SINE Alu 0 315 1 1278 194 131 99 chr5 196641398 196641975 -6443557 + MER57-int LTR ERV1 2733 3408 -1528 343 195 49 0 chr5 196641975 196642057 -6443475 + LTR54B LTR ERV1 49 134 -364 317 96 19 19 chr5 196642077 196642129 -6443403 - MER106B DNA MER1_type 0 1059 1008 4040 206 68 48 chr5 196642134 196643352 -6442180 + MER57-int LTR ERV1 3008 4167 -704 2292 116 3 0 chr5 196643416 196643719 -6441813 - AluSx SINE Alu -8 304 1 2470 204 31 11 chr5 196643744 196644255 -6441277 + MER57-int LTR ERV1 4295 7124 -413 2494 57 10 0 chr5 196644259 196644560 -6440972 + AluY SINE Alu 8 311 0 394 194 194 0 chr5 196644575 196644678 -6440854 + LTR54 LTR ERV1 1 123 -387 509 254 75 44 chr5 196644708 196644936 -6440596 - MER106A DNA MER1_type 0 236 2 624 245 111 96 chr5 196645068 196645464 -6440068 + L1MC5 LINE L1 7260 7671 -290 2541 73 0 6 chr5 196645464 196645777 -6439755 - AluY SINE Alu 0 311 1 624 245 111 96 chr5 196645777 196646036 -6439496 + L1MC5 LINE L1 7671 7925 -36 2480 80 3 0 chr5 196646313 196646624 -6438908 - AluSp SINE Alu -1 312 1 1028 242 186 22 chr5 196647146 196647727 -6437805 - L2 LINE L2 0 3313 2635 259 325 101 10 chr5 196647966 196648175 -6437357 + L2 LINE L2 2922 3149 -164 296 250 50 30 chr5 196648320 196648420 -6437112 + MLT1L LTR MaLR 514 615 0 4260 170 56 24 chr5 196649278 196650513 -6435019 + L1MB7 LINE L1 4884 6155 -29 237 138 17 69 chr5 196650531 196650589 -6434943 + L1MB7 LINE L1 6114 6168 -16 258 196 0 0 chr5 196650599 196650655 -6434877 + L1MB7 LINE L1 6110 6165 -19 267 257 220 8 chr5 196650712 196650957 -6434575 + L2 LINE L2 2564 2860 -454 206 277 106 38 chr5 196650994 196651229 -6434303 + L2 LINE L2 2969 3219 -94 2411 135 26 31 chr5 196651287 196651517 -6434015 - LTR51 LTR ERV1 -66 605 376 2259 101 7 0 chr5 196651517 196651815 -6433717 + AluSp SINE Alu 1 300 -13 2411 135 26 31 chr5 196651815 196652000 -6433532 - LTR51 LTR ERV1 -295 376 192 870 175 105 50 chr5 196652055 196652255 -6433277 - LTR51 LTR ERV1 -460 211 1 259 273 121 45 chr5 196652299 196652431 -6433101 + MIR SINE MIR 66 207 -55 256 254 61 44 chr5 196653290 196653404 -6432128 + MIR SINE MIR 31 146 -116 291 266 65 39 chr5 196653463 196653822 -6431710 + L1ME3A LINE L1 5031 5399 -747 911 119 0 15 chr5 196653822 196653956 -6431576 + AluJb SINE Alu 1 132 -180 1896 154 3 7 chr5 196653958 196654263 -6431269 + AluJb SINE Alu 1 304 -8 361 244 66 2 chr5 196654279 196654382 -6431150 + L1ME3A LINE L1 5384 5490 -677 665 281 50 41 chr5 196654385 196654705 -6430827 - LTR24 LTR ERV1 0 467 145 466 134 0 24 chr5 196654801 196654883 -6430649 - LTR24B LTR ERV1 -493 83 4 522 238 80 57 chr5 196654884 196655106 -6430426 + L1ME3A LINE L1 5488 5703 -459 1003 237 4 39 chr5 196655106 196655338 -6430194 - MER58A DNA MER1_type 0 224 1 522 238 80 57 chr5 196655338 196655529 -6430003 + L1ME3A LINE L1 5703 5963 -199 256 273 38 76 chr5 196655579 196655711 -6429821 + L1ME3A LINE L1 5965 6091 -79 1753 167 61 0 chr5 196655737 196656031 -6429501 - AluJo SINE Alu 0 312 1 2027 156 0 7 chr5 196656123 196656430 -6429102 - AluJb SINE Alu -7 305 1 286 304 75 32 chr5 196656986 196657239 -6428293 + L1ME LINE L1 5555 5818 -303 2025 139 20 73 chr5 196657695 196657750 -6427782 - THE1C LTR MaLR 0 375 319 2225 54 58 4 chr5 196657750 196658066 -6427466 - AluY SINE Alu 0 311 1 1606 108 5 0 chr5 196658069 196658281 -6427251 - AluSp SINE Alu -17 296 84 2025 139 20 73 chr5 196658281 196658617 -6426915 - THE1C LTR MaLR -58 317 1 4938 142 26 0 chr5 196658627 196659389 -6426143 + LTR39 LTR ERV1 1 782 -1 234 91 0 0 chr5 196659415 196659448 -6426084 + (CAT)n Simple_repeat Simple_repeat 2 34 0 418 225 100 12 chr5 196659452 196659612 -6425920 + MER104 DNA MER2_type 5 178 -2 197 312 156 12 chr5 196659626 196659799 -6425733 - MIR SINE MIR -14 248 51 507 286 106 23 chr5 196659999 196660347 -6425185 + MLT1K LTR MaLR 67 460 -155 2304 119 0 0 chr5 196660347 196660657 -6424875 + AluSg SINE Alu 1 310 0 190 286 214 8 chr5 196661018 196661144 -6424388 + L3 LINE CR1 1375 1526 -51 523 254 6 47 chr5 196661177 196661346 -6424186 + MER5A DNA MER1_type 27 188 -1 362 315 55 16 chr5 196661741 196661868 -6423664 - L2 LINE L2 -3 3269 3138 341 286 112 58 chr5 196661952 196662246 -6423286 - L2 LINE L2 -12 3301 2992 1573 256 48 39 chr5 196662268 196662709 -6422823 + MER70B LTR ERVL 1 445 -133 401 310 186 29 chr5 196662812 196663398 -6422134 - L2 LINE L2 -341 2973 2274 2342 162 33 19 chr5 196663398 196663824 -6421708 - MSTB1 LTR MaLR 0 432 1 401 310 186 29 chr5 196663824 196663888 -6421644 - L2 LINE L2 -1040 2274 2221 1822 132 17 14 chr5 196664323 196664618 -6420914 - AluY SINE Alu -15 296 1 247 342 46 25 chr5 196664698 196664935 -6420597 + L2 LINE L2 3016 3257 -15 518 196 20 7 chr5 196665444 196665592 -6419940 + GA-rich Low_complexity Low_complexity 1 150 0 1721 176 28 100 chr5 196667011 196667550 -6417982 - MLT1D LTR MaLR -5 500 1 298 250 0 23 chr5 196667749 196667837 -6417695 + (TA)n Simple_repeat Simple_repeat 1 86 0 1988 181 20 0 chr5 196668264 196668612 -6416920 - MLT1A1 LTR MaLR 0 365 11 555 329 32 5 chr5 196668759 196668975 -6416557 + MIR SINE MIR 37 258 -4 1896 88 0 0 chr5 196669015 196669243 -6416289 + AluSc SINE Alu 61 288 -21 22 56 0 0 chr5 196669301 196669337 -6416195 + AT_rich Low_complexity Low_complexity 1 36 0 1964 242 31 26 chr5 196669355 196669830 -6415702 - LTR40a LTR ERVL 0 519 31 355 241 7 7 chr5 196670510 196670647 -6414885 + GA-rich Low_complexity Low_complexity 2 138 0 399 249 52 134 chr5 196671894 196672260 -6413272 - MLT1K LTR MaLR 0 588 253 659 190 0 36 chr5 196673502 196673639 -6411893 - FLAM_C SINE Alu -10 133 2 2629 62 3 0 chr5 196674257 196674564 -6410968 - AluSp SINE Alu -5 308 1 27 0 0 0 chr5 196674577 196674604 -6410928 + AT_rich Low_complexity Low_complexity 1 27 0 2622 194 17 27 chr5 196674764 196674859 -6410673 - L1M2 LINE L1 -3123 4085 3991 2325 115 0 6 chr5 196674859 196675173 -6410359 - AluSx SINE Alu 0 312 1 2622 194 17 27 chr5 196675173 196675495 -6410037 - L1M2 LINE L1 -3217 3991 3674 1699 114 0 4 chr5 196675495 196675723 -6409809 - AluSg/x SINE Alu -8 304 78 2622 194 17 27 chr5 196675723 196675942 -6409590 - L1M2 LINE L1 -3534 3674 3454 2259 127 99 23 chr5 196675945 196676338 -6409194 - MSTA LTR MaLR 0 428 6 4727 196 94 43 chr5 196676394 196677819 -6407713 - L1M2 LINE L1 -3788 3420 1930 327 260 53 77 chr5 196677831 196678000 -6407532 - MLT1K LTR MaLR -19 569 405 463 271 125 34 chr5 196678001 196678418 -6407114 - L1M2 LINE L1 -5297 1912 687 329 176 199 9 chr5 196681176 196681320 -6404212 - MLT1J LTR MaLR -29 482 245 1236 136 182 27 chr5 196681777 196681893 -6403639 - AluSg1 SINE Alu -11 298 201 2487 99 8 6 chr5 196681893 196682247 -6403285 - THE1A LTR MaLR 0 355 1 11503 106 6 1 chr5 196682247 196683819 -6401713 - THE1A-int LTR MaLR 0 1580 1 2485 107 8 8 chr5 196683819 196684174 -6401358 - THE1A LTR MaLR 0 355 1 1236 136 182 27 chr5 196684174 196684313 -6401219 - AluSg1 SINE Alu -107 202 1 263 234 290 0 chr5 196684757 196684864 -6400668 + MER5A DNA MER1_type 46 183 -6 2168 120 13 0 chr5 196685008 196685316 -6400216 + AluSp SINE Alu 2 313 0 358 253 152 0 chr5 196686123 196686222 -6399310 - MER81 DNA DNA 0 114 1 2475 60 3 25 chr5 196687547 196687864 -6397668 - AluY SINE Alu -1 310 1 713 180 100 7 chr5 196687956 196688106 -6397426 + THE1C LTR MaLR 1 164 -211 451 276 0 24 chr5 196688650 196688777 -6396755 - MLT1K LTR MaLR -28 560 437 408 71 0 0 chr5 196688918 196688974 -6396558 + (CA)n Simple_repeat Simple_repeat 1 56 0 954 248 58 69 chr5 196689687 196690078 -6395454 + MLT1G LTR MaLR 16 338 -217 964 182 17 6 chr5 196690083 196690259 -6395273 + MLT1A1 LTR MaLR 3 180 -185 316 229 160 38 chr5 196690266 196690397 -6395135 + MIR SINE MIR 116 262 0 2048 115 3 7 chr5 196691034 196691322 -6394210 - AluSx SINE Alu -25 287 1 1248 174 4 37 chr5 196691323 196691565 -6393967 + L1MD3 LINE L1 6740 6973 -1022 825 197 26 0 chr5 196691628 196691780 -6393752 - FRAM SINE Alu -20 156 1 719 208 8 0 chr5 196692223 196692348 -6393184 - FLAM_A SINE Alu -6 127 2 2379 95 3 9 chr5 196692395 196692710 -6392822 + AluSq SINE Alu 1 313 0 887 107 29 136 chr5 196693719 196693761 -6391771 - THE1B LTR MaLR 0 364 319 2611 64 0 6 chr5 196693761 196694073 -6391459 + AluY SINE Alu 1 310 -1 887 107 29 136 chr5 196694073 196694236 -6391296 - THE1B LTR MaLR -45 319 181 2161 135 33 28 chr5 196694543 196694905 -6390627 + THE1B LTR MaLR 1 364 0 2504 78 0 0 chr5 196695470 196695776 -6389756 - AluY SINE Alu -5 306 1 236 307 58 58 chr5 196695802 196695939 -6389593 + MER5B DNA MER1_type 20 156 -22 2791 135 57 60 chr5 196696121 196696722 -6388810 - MER4D LTR ERV1 -1 865 307 2226 121 3 0 chr5 196696722 196697020 -6388512 + AluSx SINE Alu 1 299 -13 2110 173 46 40 chr5 196697029 196697310 -6388222 + MER50 LTR ERV1 1 288 -446 1926 108 0 7 chr5 196697310 196697587 -6387945 - AluSc SINE Alu -1 308 34 2110 173 46 40 chr5 196697587 196697779 -6387753 + MER50 LTR ERV1 288 477 -257 1418 130 60 30 chr5 196697879 196698148 -6387384 + MER50 LTR ERV1 435 711 -23 4522 120 27 45 chr5 196698149 196698833 -6386699 + MER49 LTR ERV1 196 890 -33 2038 130 0 29 chr5 196698833 196699141 -6386391 + AluSx SINE Alu 1 299 -13 204 40 0 0 chr5 196699141 196699166 -6386366 + (GA)n Simple_repeat Simple_repeat 2 26 0 4522 120 27 45 chr5 196699166 196699221 -6386311 + MER49 LTR ERV1 888 923 0 2368 99 0 7 chr5 196699625 196699927 -6385605 + AluSx SINE Alu 2 301 -11 1509 144 20 0 chr5 196701171 196701421 -6384111 + AluSp SINE Alu 1 255 -58 2204 228 102 136 chr5 196703714 196704390 -6381142 + L1MEc LINE L1 588 1286 -5110 1852 164 13 7 chr5 196704390 196704694 -6380838 + AluJo SINE Alu 1 306 -6 2204 228 102 136 chr5 196704694 196705050 -6380482 + L1MEc LINE L1 1286 1653 -4743 791 195 0 0 chr5 196705050 196705178 -6380354 + FAM SINE Alu 41 168 -17 2204 228 102 136 chr5 196705178 196705208 -6380324 + L1MEc LINE L1 1653 1682 -4714 2055 138 6 10 chr5 196705208 196705519 -6380013 + AluSx SINE Alu 1 310 -2 2204 228 102 136 chr5 196705519 196705719 -6379813 + L1MEc LINE L1 1682 1887 -4509 2325 95 0 3 chr5 196705719 196706015 -6379517 + AluSx SINE Alu 1 295 -17 2204 228 102 136 chr5 196706015 196706110 -6379422 + L1MEc LINE L1 1887 1984 -4412 2282 104 0 23 chr5 196706110 196706417 -6379115 + AluSc SINE Alu 1 300 -9 2204 228 102 136 chr5 196706417 196706689 -6378843 + L1MEc LINE L1 1984 2288 -4108 233 197 16 0 chr5 196706829 196706890 -6378642 + (TA)n Simple_repeat Simple_repeat 1 62 0 27 29 0 0 chr5 196707197 196707231 -6378301 + AT_rich Low_complexity Low_complexity 1 34 0 2049 92 3 68 chr5 196710397 196710722 -6374810 - AluSg SINE Alu -6 304 1 2056 198 45 41 chr5 196711319 196711829 -6373703 + LTR12 LTR ERV1 203 714 0 238 156 0 0 chr5 196712184 196712220 -6373312 + L1MB3 LINE L1 6107 6145 -38 2090 119 7 14 chr5 196712220 196712513 -6373019 + AluSx SINE Alu 1 291 -21 649 280 92 5 chr5 196713081 196713288 -6372244 - MIR SINE MIR -11 251 27 464 225 46 40 chr5 196713827 196713978 -6371554 + MIR SINE MIR 109 260 -2 707 228 7 0 chr5 196715422 196715571 -6369961 + MER58B DNA MER1_type 7 156 -185 1019 168 0 6 chr5 196715573 196715734 -6369798 + FRAM SINE Alu 1 155 -21 715 207 14 21 chr5 196715809 196715954 -6369578 + MER58B DNA MER1_type 196 339 -2 316 268 109 7 chr5 196716150 196716288 -6369244 - L1ME4a LINE L1 -39 6082 5931 467 269 91 32 chr5 196716341 196716527 -6369005 - MLT1K LTR MaLR -111 477 281 1804 189 22 38 chr5 196716561 196716932 -6368600 - MLT1A1 LTR MaLR 0 365 1 345 329 20 13 chr5 196717038 196717187 -6368345 - MIR3 SINE MIR -2 206 57 618 214 8 8 chr5 196717321 196717452 -6368080 + FLAM_A SINE Alu 2 132 -1 2449 91 3 0 chr5 196717454 196717763 -6367769 + AluY SINE Alu 1 310 -1 193 308 145 38 chr5 196718243 196718358 -6367174 - L2 LINE L2 -2 3270 3132 2203 117 0 13 chr5 196718358 196718667 -6366865 - AluSx SINE Alu -7 305 1 193 308 145 38 chr5 196718667 196718710 -6366822 - L2 LINE L2 -140 3132 3095 21 0 0 0 chr5 196719278 196719299 -6366233 + AT_rich Low_complexity Low_complexity 1 21 0 349 125 0 0 chr5 196719312 196719368 -6366164 - Alu SINE Alu -1 299 244 1340 160 38 52 chr5 196719370 196719657 -6365875 - L1M3 LINE L1 -557 5623 5341 1244 184 5 9 chr5 196719660 196719883 -6365649 - AluJo SINE Alu -5 307 86 963 262 0 5 chr5 196719940 196720161 -6365371 - AluJo SINE Alu -92 220 1 458 252 31 25 chr5 196720434 196720593 -6364939 - MIR SINE MIR -55 207 48 1317 123 238 12 chr5 196720650 196720894 -6364638 - AluSg1 SINE Alu -10 299 1 4018 168 97 47 chr5 196720923 196721907 -6363625 + pTR5 LTR ERV1 741 1773 -665 2397 137 83 14 chr5 196723694 196724190 -6361342 - L1MA4 LINE L1 -2 6298 5769 1018 153 153 5 chr5 196724193 196724441 -6361091 - AluJo SINE Alu 0 350 73 2709 161 14 6 chr5 196724441 196724933 -6360599 - L1M3 LINE L1 -950 5196 4701 1562 199 33 16 chr5 196724936 196725242 -6360290 - AluJo SINE Alu -1 311 1 759 204 0 58 chr5 196725246 196725266 -6360266 - MLT1A2 LTR MaLR -212 162 142 1408 170 110 28 chr5 196725266 196725584 -6359948 + MER2 DNA MER2_type 1 344 0 759 204 0 58 chr5 196725584 196725735 -6359797 - MLT1A2 LTR MaLR -232 142 1 402 250 110 22 chr5 196725872 196726008 -6359524 + MIR SINE MIR 78 225 -37 2577 48 0 19 chr5 196726796 196727110 -6358422 + AluY SINE Alu 1 308 -3 1052 57 8 0 chr5 196727133 196727256 -6358276 + AluSq/x SINE Alu 1 124 -189 413 105 0 79 chr5 196727294 196727347 -6358185 + AluSg/x SINE Alu 75 122 -188 189 0 0 0 chr5 196727347 196727368 -6358164 + (TA)n Simple_repeat Simple_repeat 2 22 0 413 105 0 79 chr5 196727368 196727390 -6358142 + AluSg/x SINE Alu 122 144 -166 1287 122 0 94 chr5 196727390 196727645 -6357887 + AluSg/x SINE Alu 75 305 -5 243 308 118 35 chr5 196727861 196728150 -6357382 + L2 LINE L2 775 1087 -2227 344 222 71 4 chr5 196728885 196729011 -6356521 - MIR SINE MIR -79 183 3 350 189 14 27 chr5 196729783 196729857 -6355675 + MLT1I LTR MaLR 323 395 -14 * 1766 187 56 37 chr5 196729855 196729926 -6355606 - Charlie1b DNA MER1_type -2238 523 455 2632 178 30 46 chr5 196729926 196730493 -6355039 + MER74A LTR ERVL 1 558 0 1766 187 56 37 chr5 196730493 196730886 -6354646 - Charlie1b DNA MER1_type -2306 455 50 2135 105 10 3 chr5 196730914 196731210 -6354322 + AluSq SINE Alu 1 298 -15 381 169 5 206 chr5 196731219 196731287 -6354245 + L1 LINE L1 3393 3403 -2743 1301 54 12 6 chr5 196731287 196731455 -6354077 + L1MA1 LINE L1 6130 6298 -4 381 169 5 206 chr5 196731455 196731570 -6353962 + L1 LINE L1 3403 3539 -2607 525 171 39 101 chr5 196731617 196731746 -6353786 + L1P LINE L1 3540 3660 -2486 276 272 86 0 chr5 196732554 196732635 -6352897 + L3 LINE CR1 762 849 -728 520 326 82 70 chr5 196733101 196733211 -6352321 + L3 LINE CR1 911 1018 -559 1516 219 60 0 chr5 196733211 196733530 -6352002 + MER58B DNA MER1_type 4 341 0 520 326 82 70 chr5 196733530 196733750 -6351782 + L3 LINE CR1 1018 1245 -332 268 286 107 0 chr5 196734103 196734187 -6351345 + L3 LINE CR1 1254 1346 -231 337 292 122 50 chr5 196734224 196734584 -6350948 + L2 LINE L2 2885 3270 -2 243 295 98 0 chr5 196734594 196734716 -6350816 + L3 LINE CR1 1363 1496 -81 234 0 0 0 chr5 196737055 196737081 -6348451 + (T)n Simple_repeat Simple_repeat 1 26 0 859 186 107 56 chr5 196738086 196738445 -6347087 - MSTC LTR MaLR 0 428 1 310 269 46 19 chr5 196738457 196738565 -6346967 + MIR SINE MIR 47 157 -105 306 308 37 19 chr5 196738576 196738683 -6346849 - MIR SINE MIR 0 262 154 299 298 48 24 chr5 196738762 196738886 -6346646 - MIR SINE MIR -105 157 31 361 295 38 0 chr5 196738892 196738997 -6346535 + MIR SINE MIR 153 261 -1 368 335 65 6 chr5 196739845 196740015 -6345517 + L1MC4a LINE L1 5578 5757 -2051 691 136 0 59 chr5 196740023 196740141 -6345391 + FRAM SINE Alu 43 153 -23 326 250 162 29 chr5 196740156 196740292 -6345240 + L1MC4a LINE L1 5777 5930 -1878 1975 128 3 3 chr5 196740623 196740920 -6344612 + AluSp SINE Alu 1 297 -16 2758 77 30 6 chr5 196741456 196741822 -6343710 + THE1C LTR MaLR 1 375 0 319 322 156 24 chr5 196741925 196742130 -6343402 - MIR SINE MIR -11 251 20 23 86 0 0 chr5 196742198 196742256 -6343276 + AT_rich Low_complexity Low_complexity 1 58 0 1612 176 10 7 chr5 196743857 196744153 -6341379 - AluJb SINE Alu -15 297 1 3571 180 85 12 chr5 196744305 196745200 -6340332 - L1ME1 LINE L1 -29 6137 5180 203 161 0 0 chr5 196745302 196745333 -6340199 + (TG)n Simple_repeat Simple_repeat 2 32 0 1338 206 4 11 chr5 196745467 196745739 -6339793 + AluJo SINE Alu 1 270 -42 289 57 0 0 chr5 196745739 196745774 -6339758 - THE1A LTR MaLR 0 355 321 * 331 80 22 0 chr5 196745762 196745816 -6339716 - THE1B LTR MaLR -300 55 1 10792 96 13 48 chr5 196745816 196747452 -6338080 - THE1B-int LTR MaLR 0 1580 1 2159 116 53 44 chr5 196747452 196747813 -6337719 - THE1B LTR MaLR 0 364 1 381 281 59 54 chr5 196747931 196748134 -6337398 - MIR SINE MIR -57 205 2 2159 102 0 3 chr5 196748365 196748660 -6336872 + AluSx SINE Alu 1 294 -18 511 330 97 0 chr5 196749281 196749487 -6336045 + MIR SINE MIR 19 244 -18 1598 197 39 28 chr5 196749638 196749994 -6335538 - MLT1A1 LTR MaLR -5 360 1 2401 30 40 0 chr5 196751043 196751339 -6334193 - AluY SINE Alu -3 308 1 341 253 63 14 chr5 196753059 196753171 -6332361 - MIR SINE MIR -63 145 35 282 217 0 0 chr5 196753312 196753372 -6332160 - L1M1 LINE L1 -4604 2961 2902 2089 123 3 0 chr5 196753390 196753698 -6331834 + AluSx SINE Alu 1 309 -3 930 226 143 11 chr5 196753700 196753845 -6331687 + LTR37A LTR ERV1 32 157 -269 372 22 0 0 chr5 196753845 196753890 -6331642 + (CA)n Simple_repeat Simple_repeat 2 46 0 930 226 143 11 chr5 196753890 196754093 -6331439 + LTR37A LTR ERV1 157 426 0 2191 102 0 3 chr5 196754449 196754753 -6330779 + AluSg SINE Alu 1 303 -7 684 221 98 0 chr5 196754755 196754918 -6330614 + AluJo/FRAM SINE Alu 130 308 -4 550 248 28 21 chr5 196755132 196755277 -6330255 + LTR54B LTR ERV1 1 146 -352 22 0 0 0 chr5 196755508 196755530 -6330002 + GC_rich Low_complexity Low_complexity 1 22 0 1804 134 3 13 chr5 196755900 196756198 -6329334 - AluJb SINE Alu -17 295 1 270 260 39 24 chr5 196756437 196756564 -6328968 - L1MC4a LINE L1 -1797 6011 5883 2078 110 0 0 chr5 196756630 196756911 -6328621 + AluSq SINE Alu 1 281 -32 246 245 116 80 chr5 196756940 196757267 -6328265 - L1ME4a LINE L1 -57 6064 5726 239 248 52 72 chr5 196757355 196757508 -6328024 + L1MC5 LINE L1 7758 7907 -54 314 287 78 9 chr5 196757943 196758058 -6327474 - MIR SINE MIR -88 174 52 2073 103 20 0 chr5 196758501 196758801 -6326731 + AluSx SINE Alu 1 306 -6 827 265 72 57 chr5 196758819 196759083 -6326449 - MLT1J LTR MaLR -136 375 108 641 194 136 39 chr5 196759118 196759324 -6326208 + Charlie8 DNA MER1_type 32 257 -2160 408 20 0 0 chr5 196759415 196759464 -6326068 + (TTA)n Simple_repeat Simple_repeat 1 49 0 680 236 7 0 chr5 196759464 196759608 -6325924 - FRAM SINE Alu -32 144 1 598 156 0 0 chr5 196759846 196759942 -6325590 + AluSg/x SINE Alu 189 284 -25 343 178 23 108 chr5 196759951 196760080 -6325452 + MER4B-int LTR ERV1 2558 2675 -4083 1897 97 3 47 chr5 196760088 196760435 -6325097 - AluSc SINE Alu 0 309 1 3462 179 22 51 chr5 196760468 196761179 -6324353 - LTR8 LTR ERV1 0 691 1 2036 131 0 3 chr5 196761243 196761540 -6323992 + AluSx SINE Alu 1 296 -16 278 182 0 91 chr5 196761542 196761597 -6323935 + MER66B LTR ERV1 296 345 -141 498 264 0 0 chr5 196761723 196761852 -6323680 - L1MC4a LINE L1 -360 5802 5674 272 244 0 13 chr5 196761873 196761951 -6323581 - L1MC4a LINE L1 -1322 4824 4748 1526 199 7 10 chr5 196762356 196762662 -6322870 + AluJb SINE Alu 1 305 -7 445 221 28 0 chr5 196762897 196763021 -6322511 + L1MC4a LINE L1 5726 5858 -263 26 30 0 0 chr5 196763038 196763071 -6322461 + AT_rich Low_complexity Low_complexity 1 33 0 234 105 0 0 chr5 196763071 196763109 -6322423 + (TG)n Simple_repeat Simple_repeat 2 39 0 454 189 168 0 chr5 196763113 196763208 -6322324 + MIR SINE MIR 36 146 -116 2188 92 0 16 chr5 196763211 196763525 -6322007 + AluSq SINE Alu 1 309 -4 1179 241 186 22 chr5 196764265 196764846 -6320686 + L2 LINE L2 2635 3313 0 195 278 56 14 chr5 196765895 196765967 -6319565 - MIR3 SINE MIR -53 155 81 352 179 277 36 chr5 196766187 196766299 -6319233 - MER117 DNA MER1_type -6 191 53 674 268 94 35 chr5 196766555 196766842 -6318690 - MLT1K LTR MaLR -28 560 257 388 367 18 12 chr5 196767164 196767333 -6318199 - MER5A DNA MER1_type -7 182 13 732 229 7 0 chr5 196767580 196767724 -6317808 + FRAM SINE Alu 1 144 -32 327 25 0 0 chr5 196767724 196767764 -6317768 + (TAA)n Simple_repeat Simple_repeat 1 40 0 576 208 146 49 chr5 196767856 196768082 -6317450 - Charlie8 DNA MER1_type -2160 257 10 824 265 72 57 chr5 196768099 196768363 -6317169 + MLT1J LTR MaLR 108 375 -136 2168 108 0 0 chr5 196768381 196768687 -6316845 - AluSx SINE Alu -6 306 1 1242 213 46 46 chr5 196768942 196769331 -6316201 - LTR37A LTR ERV1 0 426 38 2245 86 3 0 chr5 196769342 196769633 -6315899 - AluSc SINE Alu -17 292 1 827 131 7 35 chr5 196769783 196769928 -6315604 + AluSq/x SINE Alu 1 141 -171 249 299 11 35 chr5 196769989 196770076 -6315456 + MER5B DNA MER1_type 6 90 -88 2156 264 65 83 chr5 196770303 196770316 -6315216 + L2 LINE L2 1719 1731 -1582 180 0 0 0 chr5 196770316 196770336 -6315196 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 2156 264 65 83 chr5 196770336 196771043 -6314489 + L2 LINE L2 1731 2449 -864 2248 108 0 0 chr5 196771043 196771349 -6314183 - AluSg SINE Alu -4 306 1 2156 264 65 83 chr5 196771349 196771399 -6314133 + L2 LINE L2 2449 2498 -815 1132 176 25 8 chr5 196771399 196771644 -6313888 - L1MA8 LINE L1 -10 6281 6033 2156 264 65 83 chr5 196771644 196772478 -6313054 + L2 LINE L2 2498 3295 -18 804 185 25 0 chr5 196772568 196772730 -6312802 - MER5A DNA MER1_type -23 166 1 739 307 71 0 chr5 196773580 196773805 -6311727 - MIR SINE MIR -5 257 17 601 225 46 46 chr5 196774438 196774459 -6311073 - MER20B DNA MER1_type -36 747 727 2070 87 24 0 chr5 196774459 196774747 -6310785 + AluSx SINE Alu 1 295 -17 601 225 46 46 chr5 196774747 196774965 -6310567 - MER20B DNA MER1_type -55 728 508 2380 120 7 62 chr5 196775376 196775792 -6309740 + MER57A LTR ERV1 1 393 -10 2225 96 0 10 chr5 196775887 196776200 -6309332 + AluSq SINE Alu 3 312 -1 2135 117 7 3 chr5 196776429 196776737 -6308795 + AluSp SINE Alu 1 309 -4 345 236 50 87 chr5 196777028 196777189 -6308343 - MER20B DNA MER1_type -572 211 57 1114 136 0 0 chr5 196777189 196777366 -6308166 + AluSg/x SINE Alu 130 306 -4 394 219 35 132 chr5 196777418 196777512 -6308020 - MER87 LTR ERV1 -40 516 415 2132 102 0 0 chr5 196777512 196777847 -6307685 - AluSx SINE Alu 0 335 1 21 0 0 0 chr5 196777855 196777876 -6307656 + AT_rich Low_complexity Low_complexity 1 21 0 2470 71 10 0 chr5 196777884 196778180 -6307352 - AluSp SINE Alu -14 299 1 394 219 35 132 chr5 196778180 196778274 -6307258 - MER87 LTR ERV1 -155 401 311 316 226 16 0 chr5 196778546 196778608 -6306924 - MIR SINE MIR -111 151 89 2133 74 44 4 chr5 196778778 196779077 -6306455 + AluY SINE Alu 1 310 0 319 191 15 15 chr5 196779080 196779148 -6306384 + LTR24B LTR ERV1 10 77 -499 235 319 42 21 chr5 196779272 196779416 -6306116 + LTR24 LTR ERV1 178 324 -143 225 127 55 18 chr5 196779448 196779503 -6306029 + LTR24B LTR ERV1 513 569 -7 2245 127 0 7 chr5 196779547 196779854 -6305678 + AluSx SINE Alu 1 305 -7 699 268 34 38 chr5 196780886 196781151 -6304381 + L1MC5 LINE L1 7299 7562 -399 1064 192 4 41 chr5 196781160 196781405 -6304127 + MER106A DNA MER1_type 1 236 0 495 166 73 33 chr5 196781459 196781610 -6303922 + L1MC5 LINE L1 7591 7747 -214 530 257 61 0 chr5 196781756 196781904 -6303628 + Charlie8 DNA MER1_type 5 161 -2256 2700 202 23 61 chr5 196782039 196782741 -6302791 - LTR8 LTR ERV1 -16 675 1 2297 122 0 3 chr5 196782805 196783109 -6302423 + AluSq SINE Alu 1 303 -10 586 298 111 5 chr5 196783118 196783326 -6302206 - MIR SINE MIR -8 254 25 23 54 0 0 chr5 196783545 196783582 -6301950 + AT_rich Low_complexity Low_complexity 1 37 0 2324 201 26 78 chr5 196783596 196783969 -6301563 - MER97b DNA MER1_type? -367 686 362 2143 139 3 0 chr5 196783969 196784264 -6301268 + AluSx SINE Alu 1 296 -16 2324 201 26 78 chr5 196784264 196784572 -6300960 - MER97b DNA MER1_type? -691 362 40 305 204 283 35 chr5 196784721 196784834 -6300698 + MIR3 SINE MIR 6 146 -62 692 210 145 47 chr5 196784974 196785188 -6300344 - MIR SINE MIR 0 262 28 364 291 30 22 chr5 196785599 196785733 -6299799 - MIR SINE MIR -115 147 13 567 239 7 7 chr5 196787128 196787270 -6298262 - L3 LINE CR1 -42 1535 1394 485 305 14 7 chr5 196787605 196787746 -6297786 + MIR SINE MIR 26 167 -95 3152 151 71 84 chr5 196787770 196788345 -6297187 - LTR8A LTR ERV1 0 727 163 2435 91 0 0 chr5 196788345 196788642 -6296890 - AluSq SINE Alu -16 297 1 3152 151 71 84 chr5 196788642 196788803 -6296729 - LTR8A LTR ERV1 -564 163 1 303 221 189 0 chr5 196788924 196789019 -6296513 - HAL1b LINE L1 -3 1345 1233 214 368 37 9 chr5 196789091 196789234 -6296298 + MIR SINE MIR 7 151 -57 1460 137 117 23 chr5 196789234 196789274 -6296258 - L1MB8 LINE L1 0 6178 6143 2338 122 30 22 chr5 196789274 196789635 -6295897 - THE1B LTR MaLR 0 364 1 1460 137 117 23 chr5 196789635 196789901 -6295631 - L1MB8 LINE L1 -35 6143 5843 270 184 237 0 chr5 196790415 196790491 -6295041 - MIR SINE MIR -54 208 115 5140 152 21 32 chr5 196790677 196791365 -6294167 + L1MB3 LINE L1 5025 5691 -492 2175 118 0 0 chr5 196791365 196791652 -6293880 - AluSq SINE Alu -26 287 1 5140 152 21 32 chr5 196791652 196792138 -6293394 + L1MB3 LINE L1 5691 6181 -2 454 259 52 0 chr5 196792405 196792537 -6292995 - MIR SINE MIR -66 142 4 2254 101 3 3 chr5 196792642 196792940 -6292592 + AluSx SINE Alu 1 298 -14 411 272 34 20 chr5 196792980 196793127 -6292405 - L2 LINE L2 0 3313 3165 365 287 23 0 chr5 196793941 196794028 -6291504 - MIR SINE MIR -76 132 44 1932 137 20 10 chr5 196794081 196794381 -6291151 + AluSx SINE Alu 1 303 -9 38 0 0 0 chr5 196794381 196794419 -6291113 + AT_rich Low_complexity Low_complexity 1 38 0 402 289 44 7 chr5 196794453 196794588 -6290944 - MIR SINE MIR 0 262 123 1822 154 13 13 chr5 196794809 196795108 -6290424 - AluJo SINE Alu -13 299 1 351 277 84 17 chr5 196795349 196795468 -6290064 + MIR SINE MIR 81 207 -55 567 254 0 8 chr5 196795468 196795598 -6289934 - MER58B DNA MER1_type 0 341 213 304 229 0 0 chr5 196795596 196795657 -6289875 - MER58B DNA MER1_type -280 61 1 * 472 198 36 13 chr5 196795686 196795899 -6289633 + ORSL DNA AcHobo 2 274 -1 1419 206 63 44 chr5 196795973 196796356 -6289176 - MLT1B LTR MaLR 0 390 1 447 348 99 9 chr5 196796406 196796639 -6288893 + MIR SINE MIR 5 258 -4 214 147 0 0 chr5 196796639 196796673 -6288859 + (ATGGTG)n Simple_repeat Simple_repeat 1 34 0 846 190 2 4 chr5 196796673 196796991 -6288541 + (ATG)n Simple_repeat Simple_repeat 1 318 -528 1639 171 7 115 chr5 196796991 196797400 -6288132 + MLT1A1 LTR MaLR 1 365 0 846 190 2 4 chr5 196797400 196797521 -6288011 + (ATG)n Simple_repeat Simple_repeat 318 846 0 1618 265 82 47 chr5 196797735 196798421 -6287111 - MER21B LTR ERV1 -137 726 17 2395 163 67 7 chr5 196798658 196799088 -6286444 - LTR32 LTR ERVL -1 470 15 268 234 0 0 chr5 196799311 196799358 -6286174 + MIR SINE MIR 59 105 -157 255 326 62 16 chr5 196800126 196800255 -6285277 - MLT1I LTR MaLR -175 234 100 1816 124 65 46 chr5 196800872 196801178 -6284354 + AluJo SINE Alu 1 312 0 905 280 8 15 chr5 196801187 196801448 -6284084 - MIR SINE MIR 0 262 4 2200 88 53 108 chr5 196801911 196801962 -6283570 - THE1C LTR MaLR 0 375 323 1951 99 4 22 chr5 196801962 196802278 -6283254 - AluSc SINE Alu 0 323 13 2200 88 53 108 chr5 196802278 196802622 -6282910 - THE1C LTR MaLR -52 323 1 227 303 22 22 chr5 196802696 196802785 -6282747 - L2 LINE L2 0 3313 3225 293 366 23 7 chr5 196803367 196803551 -6281981 + MIR SINE MIR 20 201 -61 684 329 35 24 chr5 196803647 196803902 -6281630 - MIR SINE MIR -3 259 2 315 279 220 56 chr5 196804056 196804319 -6281213 - L2 LINE L2 -379 2935 2602 928 119 4 187 chr5 196804319 196804554 -6280978 + 7SK RNA RNA 1 192 -1 315 279 220 56 chr5 196804554 196804631 -6280901 - L2 LINE L2 -712 2602 2539 339 300 82 29 chr5 196804763 196804933 -6280599 + MIR SINE MIR 10 188 -74 585 281 70 66 chr5 196804983 196805185 -6280347 - MIR SINE MIR -13 249 44 2127 88 30 14 chr5 196805185 196805482 -6280050 + AluY SINE Alu 1 302 -9 585 281 70 66 chr5 196805482 196805521 -6280011 - MIR SINE MIR -218 44 7 522 272 169 54 chr5 196805521 196805928 -6279604 - MLT1L LTR MaLR -3 612 159 534 259 91 28 chr5 196805928 196806168 -6279364 + MLT1G LTR MaLR 1 267 -303 384 257 102 75 chr5 196806323 196806549 -6278983 + L2 LINE L2 3075 3306 -7 393 265 66 22 chr5 196806786 196806922 -6278610 - MIR SINE MIR -32 230 89 211 256 0 0 chr5 196807034 196807073 -6278459 - L3 LINE CR1 -107 1470 1432 240 275 123 118 chr5 196808100 196808311 -6277221 - L2 LINE L2 -6 3266 3055 2471 181 9 5 chr5 196808385 196808817 -6276715 - Tigger2a DNA MER2_type 0 434 1 1200 278 105 26 chr5 196809525 196809992 -6275540 - L2 LINE L2 -3 3310 2807 2393 109 0 0 chr5 196810188 196810492 -6275040 - AluSx SINE Alu -6 306 3 6115 161 25 14 chr5 196810646 196811808 -6273724 + L1PB4 LINE L1 3954 5157 -999 2319 118 0 0 chr5 196811808 196812112 -6273420 + AluSq SINE Alu 1 304 -9 6115 161 25 14 chr5 196812112 196813124 -6272408 + L1PB4 LINE L1 5157 6156 0 2427 95 3 3 chr5 196813197 196813503 -6272029 - AluSp SINE Alu -7 306 1 2047 151 113 32 chr5 196813919 196814351 -6271181 + MLT1C LTR MaLR 1 467 0 191 329 55 0 chr5 196814407 196814480 -6271052 - L2 LINE L2 0 3272 3196 2375 77 17 3 chr5 196814758 196815056 -6270476 - AluSc SINE Alu -7 302 1 322 293 20 0 chr5 196815061 196815160 -6270372 - MER5B DNA MER1_type -77 101 1 522 280 118 5 chr5 196815222 196815432 -6270100 - MIR SINE MIR 0 262 23 792 281 13 26 chr5 196815754 196815985 -6269547 + MIR SINE MIR 2 229 -33 277 261 109 22 chr5 196816095 196816187 -6269345 + LTR33 LTR ERVL 90 189 -332 417 213 71 46 chr5 196816231 196816428 -6269104 + LTR33 LTR ERVL 302 503 -18 240 86 0 0 chr5 196817086 196817121 -6268411 + (TC)n Simple_repeat Simple_repeat 1 35 0 493 295 93 17 chr5 196817443 196817680 -6267852 - MIR SINE MIR -1 261 7 253 282 35 29 chr5 196817898 196818068 -6267464 + L1ME LINE L1 4556 4726 -1420 256 232 71 0 chr5 196818072 196818128 -6267404 - L2 LINE L2 -2 3311 3252 588 268 44 11 chr5 196818324 196818507 -6267025 - MIR SINE MIR -62 200 12 423 348 65 35 chr5 196818539 196818856 -6266676 + L1ME LINE L1 4882 5224 -922 1677 199 7 10 chr5 196818896 196819202 -6266330 + AluJb SINE Alu 1 305 -7 405 230 28 0 chr5 196819437 196819561 -6265971 + L1MC4a LINE L1 5726 5858 -263 26 30 0 0 chr5 196819578 196819611 -6265921 + AT_rich Low_complexity Low_complexity 1 33 0 234 105 0 0 chr5 196819611 196819649 -6265883 + (TG)n Simple_repeat Simple_repeat 2 39 0 669 256 123 0 chr5 196819653 196819751 -6265781 + MIR SINE MIR 36 121 -141 2475 82 0 0 chr5 196819751 196820054 -6265478 + AluSx SINE Alu 1 303 -9 669 256 123 0 chr5 196820054 196820150 -6265382 + MIR SINE MIR 121 254 -8 1577 177 35 45 chr5 196820612 196820922 -6264610 + AluJb SINE Alu 6 312 0 289 283 93 69 chr5 196820962 196821073 -6264459 + L1ME LINE L1 5361 5468 -653 2413 97 0 0 chr5 196821073 196821381 -6264151 - AluSg SINE Alu -2 308 1 289 283 93 69 chr5 196821381 196821561 -6263971 + L1ME LINE L1 5468 5640 -481 2288 122 0 3 chr5 196821561 196821865 -6263667 + AluSq SINE Alu 1 303 -10 289 283 93 69 chr5 196821865 196821971 -6263561 + L1ME LINE L1 5640 5742 -379 1425 225 64 49 chr5 196821994 196822321 -6263211 + MLT1E LTR MaLR 24 392 -201 1906 212 25 25 chr5 196822321 196822717 -6262815 - MSTD LTR MaLR 0 396 1 1425 225 64 49 chr5 196822717 196822922 -6262610 + MLT1E LTR MaLR 392 592 -1 250 197 42 42 chr5 196823417 196823488 -6262044 + MLT1J LTR MaLR 110 180 -331 215 318 123 73 chr5 196823532 196823752 -6261780 - L2 LINE L2 -94 3178 2948 275 298 35 9 chr5 196823831 196823945 -6261587 - MLT1L LTR MaLR -6 609 493 231 220 17 0 chr5 196824143 196824202 -6261330 - MLT1J LTR MaLR -342 169 110 1129 237 18 14 chr5 196824638 196824917 -6260615 - MLT2D LTR ERVL -132 282 3 2335 150 76 5 chr5 196824962 196825356 -6260176 - MSTB LTR MaLR 0 426 5 8340 166 24 57 chr5 196825360 196826832 -6258700 - MSTB-int LTR MaLR -1 1650 131 1073 78 22 17 chr5 196826832 196827011 -6258521 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1740 136 3 76 chr5 196827012 196827313 -6258219 - AluSx SINE Alu -33 279 1 8340 166 24 57 chr5 196827313 196827543 -6257989 - MSTB-int LTR MaLR -1519 132 2 2391 153 62 7 chr5 196827544 196827948 -6257584 - MSTB LTR MaLR 0 426 1 275 184 184 46 chr5 196827957 196828066 -6257466 + MIR SINE MIR 133 256 -6 224 288 93 14 chr5 196828709 196828848 -6256684 + L2 LINE L2 2942 3091 -181 619 286 118 0 chr5 196828886 196829106 -6256426 + MIR SINE MIR 8 253 -9 684 310 168 10 chr5 196829919 196830420 -6255112 + L2 LINE L2 2719 3313 0 739 226 94 54 chr5 196830679 196830974 -6254558 - MLT1H LTR MaLR -228 320 8 660 270 66 55 chr5 196831086 196831375 -6254157 - MLT1I LTR MaLR -24 385 94 193 316 228 0 chr5 196831431 196831624 -6253908 - L3 LINE CR1 -160 1417 1181 222 302 161 29 chr5 196831705 196831910 -6253622 + L2 LINE L2 2810 3041 -231 1205 287 70 27 chr5 196831984 196832152 -6253380 - L2 LINE L2 0 3313 3154 2134 123 3 0 chr5 196832152 196832511 -6253021 + AluSg SINE Alu 1 310 0 1205 287 70 27 chr5 196832511 196833034 -6252498 - L2 LINE L2 -159 3154 2584 317 293 24 30 chr5 196833877 196834041 -6251491 + GA-rich Low_complexity Low_complexity 1 163 0 216 0 0 0 chr5 196834063 196834087 -6251445 + (GA)n Simple_repeat Simple_repeat 1 24 0 282 250 16 45 chr5 196834418 196834554 -6250978 + MIR SINE MIR 47 181 -56 236 224 35 0 chr5 196835382 196835440 -6250092 + MIR SINE MIR 105 164 -98 450 342 22 13 chr5 196835576 196835801 -6249731 - MIR SINE MIR -6 256 30 275 395 90 11 chr5 196836238 196836415 -6249117 + L3b LINE CR1 1287 1477 -106 486 217 70 14 chr5 196836621 196836764 -6248768 + L1ME4a LINE L1 5963 6113 -8 247 388 45 29 chr5 196837032 196837277 -6248255 + L2 LINE L2 2725 2973 -341 2105 88 7 7 chr5 196837870 196838180 -6247352 + AluSg SINE Alu 1 310 0 1325 174 14 0 chr5 196838386 196838599 -6246933 + MER20 DNA MER1_type 4 219 0 4021 173 40 24 chr5 196838771 196839610 -6245922 - L1MB7 LINE L1 0 6184 5332 522 254 8 8 chr5 196839970 196840104 -6245428 + MIR3 SINE MIR 71 204 -4 297 350 10 0 chr5 196840418 196840518 -6245014 - L2 LINE L2 0 3313 3213 1508 148 11 22 chr5 196840798 196841068 -6244464 - AluJo SINE Alu -45 267 1 321 280 200 10 chr5 196842093 196842293 -6243239 + MER102a DNA MER1_type 91 328 -2 1822 142 3 13 chr5 196842558 196842860 -6242672 - AluJb SINE Alu -13 299 1 251 296 23 8 chr5 196843099 196843231 -6242301 - L1MC4a LINE L1 -1797 6011 5878 226 283 123 48 chr5 196843258 196843292 -6242240 - L1ME4a LINE L1 -31 6090 6060 2081 123 0 43 chr5 196843292 196843617 -6241915 + AluSq SINE Alu 1 311 -2 226 283 123 48 chr5 196843617 196843982 -6241550 - L1ME4a LINE L1 -61 6060 5661 243 268 46 65 chr5 196844018 196844171 -6241361 + L1MC5 LINE L1 7758 7907 -54 314 306 74 8 chr5 196844608 196844729 -6240803 - MIR SINE MIR -85 177 49 841 200 19 0 chr5 196845114 196845274 -6240258 - FRAM SINE Alu -3 163 1 358 299 66 77 chr5 196845306 196845483 -6240049 - L1MC5 LINE L1 -54 7907 7730 2276 113 0 0 chr5 196845483 196845794 -6239738 - AluSx SINE Alu -1 311 1 358 299 66 77 chr5 196845794 196845981 -6239551 - L1MC5 LINE L1 -231 7730 7547 658 173 0 0 chr5 196846301 196846405 -6239127 + FLAM_A SINE Alu 20 123 -19 396 291 30 8 chr5 196846408 196846542 -6238990 - MER102a DNA MER1_type -172 158 22 283 330 11 0 chr5 196846598 196846689 -6238843 + L3 LINE CR1 1421 1512 -65 211 286 24 12 chr5 196847038 196847122 -6238410 - L2 LINE L2 -65 3248 3164 183 129 0 0 chr5 196847633 196847664 -6237868 + (ATGGTG)n Simple_repeat Simple_repeat 2 32 0 329 300 0 0 chr5 196848021 196848111 -6237421 + L3 LINE CR1 1419 1508 -69 467 277 66 12 chr5 196848213 196848379 -6237153 - MIR3 SINE MIR -26 182 8 526 295 17 6 chr5 196848557 196848730 -6236802 + MIR SINE MIR 87 261 -1 203 350 22 67 chr5 196848836 196849016 -6236516 - L2 LINE L2 -94 3178 3007 259 348 13 19 chr5 196849044 196849202 -6236330 - L2 LINE L2 -377 2937 2781 455 256 105 63 chr5 196849263 196849548 -6235984 - L2 LINE L2 -669 2645 2349 1259 190 4 8 chr5 196849589 196849826 -6235706 + L1MB5 LINE L1 5929 6164 -10 2169 101 7 3 chr5 196849827 196850135 -6235397 - AluSx SINE Alu -3 309 1 264 234 0 0 chr5 196850149 196850213 -6235319 + L1M1 LINE L1 2898 2961 -4604 330 253 63 14 chr5 196850353 196850465 -6235067 + MIR SINE MIR 35 148 -63 709 272 0 11 chr5 196851145 196851329 -6234203 + MIR SINE MIR 16 197 -65 193 295 98 0 chr5 196851387 196851448 -6234084 + MIR SINE MIR 27 93 -115 275 331 38 16 chr5 196851932 196852062 -6233470 - L1MC4a LINE L1 -14 2493 2382 233 226 19 0 chr5 196852305 196852358 -6233174 - L1ME LINE L1 -469 5652 5599 1566 200 44 82 chr5 196852722 196853115 -6232417 - L1PB4 LINE L1 -1 6155 5786 1726 180 20 0 chr5 196853115 196853415 -6232117 - AluJo SINE Alu -2 310 5 1566 200 44 82 chr5 196853415 196853544 -6231988 - L1PB4 LINE L1 -370 5786 5654 640 298 25 29 chr5 196854444 196854689 -6230843 - MIR SINE MIR -3 259 16 198 250 71 0 chr5 196854712 196854768 -6230764 + MIR SINE MIR 121 180 -82 481 259 70 7 chr5 196855523 196855666 -6229866 - L2 LINE L2 -223 3049 2898 458 239 108 0 chr5 196856034 196856164 -6229368 + MIR SINE MIR 48 191 -71 366 312 9 18 chr5 196856945 196857054 -6228478 + L2 LINE L2 3197 3304 -9 201 240 0 20 chr5 196857681 196857731 -6227801 - MIR3 SINE MIR -6 202 154 1283 224 62 7 chr5 196858046 196858350 -6227182 + MER58B DNA MER1_type 17 337 -4 244 362 43 9 chr5 196858445 196858561 -6226971 - L2 LINE L2 -1 3312 3193 252 309 44 39 chr5 196858564 196858745 -6226787 - L3 LINE CR1 -345 1232 1051 189 0 0 0 chr5 196859222 196859243 -6226289 + (A)n Simple_repeat Simple_repeat 1 21 0 298 329 98 7 chr5 196860538 196860681 -6224851 - MIR SINE MIR -30 232 77 184 200 0 0 chr5 196860898 196860928 -6224604 - L2 LINE L2 -16 3256 3227 209 254 60 0 chr5 196861454 196861521 -6224011 + MIR SINE MIR 186 256 -6 246 62 0 0 chr5 196861582 196861614 -6223918 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 200 385 0 0 chr5 196861616 196861681 -6223851 - L2 LINE L2 -14 3299 3235 296 247 86 0 chr5 196861731 196861824 -6223708 + MIR3 SINE MIR 56 156 -52 460 274 0 0 chr5 196862866 196862979 -6222553 - MIR SINE MIR -70 192 80 1439 220 120 41 chr5 196863979 196864447 -6221085 - MLT1D LTR MaLR 0 505 1 228 259 55 36 chr5 196864709 196864805 -6220727 - MIR SINE MIR -90 118 21 291 315 35 14 chr5 196864850 196864993 -6220539 - MIR3 SINE MIR -45 163 18 534 223 38 32 chr5 196865465 196865622 -6219910 + L2 LINE L2 3156 3313 0 298 318 28 0 chr5 196866428 196866535 -6218997 + MIR SINE MIR 44 153 -109 237 65 0 0 chr5 196866660 196866691 -6218841 + (CCTG)n Simple_repeat Simple_repeat 2 32 0 1025 242 50 42 chr5 196866711 196867071 -6218461 - L1MB8 LINE L1 -2 6176 5814 2074 106 65 0 chr5 196867731 196868024 -6217508 + AluSx SINE Alu 1 312 0 426 265 102 0 chr5 196868039 196868186 -6217346 - MER91A DNA MER1_type -30 166 5 1162 192 70 16 chr5 196868228 196868527 -6217005 - MER58B DNA MER1_type 0 341 4 588 230 104 3 chr5 196868537 196868731 -6216801 + MIR SINE MIR 43 262 0 399 218 53 68 chr5 196869131 196869264 -6216268 + MIR SINE MIR 17 147 -61 347 288 6 55 chr5 196870084 196870247 -6215285 + MIR SINE MIR 45 199 -63 648 247 19 6 chr5 196871384 196871542 -6213990 + MIR SINE MIR 79 238 -24 277 313 40 27 chr5 196871625 196871775 -6213757 - L1MB8 LINE L1 -414 5707 5556 412 285 76 0 chr5 196872092 196872236 -6213296 + MIR SINE MIR 38 192 -70 219 281 44 89 chr5 196872561 196872696 -6212836 + MIR SINE MIR 63 191 -71 504 286 32 27 chr5 196872865 196873050 -6212482 + MIR SINE MIR 69 254 -8 217 360 0 0 chr5 196873106 196873192 -6212340 + MIR SINE MIR 56 141 -121 2511 43 0 0 chr5 196873312 196873613 -6211919 + AluY SINE Alu 1 301 -10 202 289 108 44 chr5 196873903 196874107 -6211425 + L2 LINE L2 2848 3064 -208 383 380 74 8 chr5 196874455 196874697 -6210835 + MIR SINE MIR 2 259 -3 2227 64 0 7 chr5 196875693 196875994 -6209538 - AluY SINE Alu 0 311 10 381 286 43 105 chr5 196876529 196876737 -6208795 - L2 LINE L2 -74 3198 3012 2016 92 11 14 chr5 196876737 196877041 -6208491 + AluSg SINE Alu 1 303 0 381 286 43 105 chr5 196877041 196877135 -6208397 - L2 LINE L2 -260 3012 2914 378 204 43 32 chr5 196877229 196877322 -6208210 - MIR SINE MIR -79 183 90 1029 288 53 31 chr5 196877426 196877942 -6207590 - MLT1K LTR MaLR -3 585 13 334 44 0 0 chr5 196878112 196878157 -6207375 - MADE1 DNA Mariner -1 79 35 1768 279 112 41 chr5 196878436 196878674 -6206858 + L1MB3 LINE L1 2110 2330 -3816 2279 71 3 53 chr5 196878674 196878997 -6206535 - AluY SINE Alu -4 307 1 1768 279 112 41 chr5 196878997 196880030 -6205502 + L1MB3 LINE L1 2330 3288 -2858 676 146 10 0 chr5 196880030 196880133 -6205399 + U6 snRNA snRNA 3 106 -1 1768 279 112 41 chr5 196880133 196880951 -6204581 + L1MB3 LINE L1 3288 4375 -1771 239 324 0 20 chr5 196880965 196881113 -6204419 - L1M4 LINE L1 -1672 4474 4330 530 259 174 4 chr5 196881205 196881464 -6204068 + L1MB3 LINE L1 4522 4824 -1322 479 265 19 0 chr5 196881485 196881648 -6203884 + L1MB3 LINE L1 5674 5848 -335 258 182 0 91 chr5 196881740 196881795 -6203737 - MER66A LTR ERV1 -141 337 288 2108 107 0 66 chr5 196881797 196882114 -6203418 - AluJb SINE Alu -16 296 1 1942 138 0 29 chr5 196883279 196883591 -6201941 + AluJo SINE Alu 9 311 -1 293 274 12 12 chr5 196883619 196883703 -6201829 - MIR SINE MIR -85 123 40 185 62 0 31 chr5 196884523 196884555 -6200977 + (GGAAA)n Simple_repeat Simple_repeat 4 34 0 460 238 82 14 chr5 196884557 196884747 -6200785 - MIR SINE MIR -6 256 48 329 182 15 15 chr5 196884714 196884780 -6200752 + L2 LINE L2 3248 3313 0 * 184 231 0 0 chr5 196885090 196885129 -6200403 + MIR SINE MIR 81 119 -89 310 307 146 54 chr5 196885291 196885955 -6199577 + L2 LINE L2 2001 2725 -589 539 301 86 56 chr5 196886148 196886417 -6199115 + L2 LINE L2 2994 3270 -2 340 294 70 35 chr5 196887914 196888115 -6197417 - L2 LINE L2 -466 2848 2641 291 266 18 0 chr5 196888601 196888694 -6196838 - MIR3 SINE MIR -52 156 60 228 264 76 76 chr5 196889546 196889743 -6195789 - L1MC/D LINE L1 -1933 5875 5679 243 0 0 0 chr5 196889763 196889790 -6195742 + (TG)n Simple_repeat Simple_repeat 2 28 0 298 283 84 49 chr5 196890156 196890472 -6195060 - MLT1H LTR MaLR -16 533 91 269 231 130 19 chr5 196891210 196891318 -6194214 - Charlie8 DNA MER1_type -2184 233 114 244 297 0 0 chr5 196891321 196891395 -6194137 + MIR SINE MIR 179 252 -10 214 238 0 0 chr5 196891409 196891451 -6194081 + GA-rich Low_complexity Low_complexity 2 43 0 290 283 40 10 chr5 196892067 196892166 -6193366 + MIR SINE MIR 121 222 -40 1151 145 79 26 chr5 196893907 196894135 -6191397 - L1MB7 LINE L1 -16 6168 5929 1465 178 38 115 chr5 196894590 196895095 -6190437 + LTR37B LTR ERV1 1 466 -2 2270 109 0 6 chr5 196895306 196895617 -6189915 - AluSx SINE Alu -1 311 3 19434 22 7 1 chr5 196896132 196899167 -6186365 + L1PA3 LINE L1 3115 6155 0 267 31 0 0 chr5 196899264 196899296 -6186236 + (A)n Simple_repeat Simple_repeat 1 32 0 256 252 223 36 chr5 196899777 196899916 -6185616 + MIR SINE MIR 88 252 -10 243 0 0 0 chr5 196900251 196900278 -6185254 + (T)n Simple_repeat Simple_repeat 1 27 0 1907 145 39 19 chr5 196900817 196901022 -6184510 - L1MB7 LINE L1 -658 5642 5426 1291 217 89 63 chr5 196901022 196901516 -6184016 - MER84 LTR ERV1 0 507 1 1907 145 39 19 chr5 196901516 196901669 -6183863 - L1MB7 LINE L1 -874 5426 5277 236 61 0 0 chr5 196901667 196901700 -6183832 + L1MA4 LINE L1 5747 5779 -525 * 342 0 0 0 chr5 196901701 196901739 -6183793 + (TA)n Simple_repeat Simple_repeat 2 39 0 2501 112 3 3 chr5 196901739 196902096 -6183436 - THE1B LTR MaLR -7 357 1 2970 136 24 6 chr5 196902096 196902595 -6182937 + L1MA4 LINE L1 5787 6294 -6 186 260 269 10 chr5 196902843 196902947 -6182585 + L2 LINE L2 3125 3255 -17 1373 287 142 24 chr5 196903083 196903619 -6181913 + MER115 DNA AcHobo 1 621 -72 1205 246 127 36 chr5 196903619 196904116 -6181416 - MLT1F LTR MaLR 0 542 1 1373 287 142 24 chr5 196904116 196904199 -6181333 + MER115 DNA AcHobo 621 693 0 187 263 18 0 chr5 196905334 196905391 -6180141 + L2 LINE L2 2721 2778 -536 393 286 87 25 chr5 196905508 196905669 -6179863 - MER69A DNA AcHobo -4 173 3 319 274 9 62 chr5 196906246 196906359 -6179173 + MIR3 SINE MIR 14 120 -88 287 290 32 0 chr5 196907527 196907620 -6177912 + MIR SINE MIR 45 140 -68 242 160 128 106 chr5 196907801 196907895 -6177637 + MIR SINE MIR 14 109 -153 292 160 50 110 chr5 196908068 196908168 -6177364 - MLT1J1 LTR MaLR -7 439 346 294 185 187 41 chr5 196908791 196908961 -6176571 - MLT1I LTR MaLR -202 207 13 272 366 134 14 chr5 196909036 196909312 -6176220 - L2 LINE L2 -10 3262 2954 1865 194 99 11 chr5 196909483 196909936 -6175596 - MLT1D LTR MaLR -12 493 1 3922 121 57 62 chr5 196910096 196910868 -6174664 + LTR1 LTR ERV1 18 785 0 1699 168 4 4 chr5 196910870 196911138 -6174394 + AluJo SINE Alu 34 301 -11 2449 72 0 0 chr5 196911139 196911430 -6174102 + AluY SINE Alu 1 291 -20 399 266 204 2 chr5 196911492 196911867 -6173665 + MLT1K LTR MaLR 13 516 -72 329 290 20 0 chr5 196912436 196912536 -6172996 - L3 LINE CR1 -80 1497 1396 187 273 239 0 chr5 196913338 196913426 -6172106 - MIR SINE MIR -114 148 40 359 292 44 9 chr5 196913949 196914062 -6171470 + MIR SINE MIR 77 193 -69 * 487 264 71 19 chr5 196914061 196914279 -6171253 - MIR SINE MIR -19 243 12 276 288 19 100 chr5 196914346 196914506 -6171026 - L2 LINE L2 -118 3154 3008 213 242 37 98 chr5 196914565 196914658 -6170874 + MIR SINE MIR 60 135 -73 283 277 0 0 chr5 196914792 196914857 -6170675 - MIR SINE MIR -58 150 86 228 303 110 9 chr5 196914884 196914993 -6170539 - MIR SINE MIR -36 226 107 620 220 44 33 chr5 196915582 196915764 -6169768 + MLT1K LTR MaLR 405 588 0 1155 174 37 0 chr5 196915939 196916157 -6169375 + L1MB1 LINE L1 5938 6163 -5 224 242 32 16 chr5 196916476 196916538 -6168994 - L2 LINE L2 -4 3268 3206 252 268 145 22 chr5 196917203 196917341 -6168191 - MIR3 SINE MIR -53 155 1 183 290 47 65 chr5 196917683 196917790 -6167742 - L2 LINE L2 -39 3274 3170 2205 130 27 0 chr5 196918005 196918306 -6167226 + AluSg SINE Alu 1 309 -1 816 265 103 24 chr5 196918796 196919207 -6166325 + MLT1K LTR MaLR 10 502 -86 2448 147 41 12 chr5 196919207 196919621 -6165911 - MSTA LTR MaLR 0 428 3 816 265 103 24 chr5 196919621 196919676 -6165856 + MLT1K LTR MaLR 502 551 -37 1527 203 17 27 chr5 196920334 196920629 -6164903 - AluJo SINE Alu -20 292 1 685 260 34 32 chr5 196920649 196920890 -6164642 + MLT1H LTR MaLR 2 211 -198 980 203 6 0 chr5 196920973 196921150 -6164382 - MER45A DNA AcHobo 0 178 1 1638 218 9 12 chr5 196921180 196921519 -6164013 + MER58B DNA MER1_type 1 338 -3 880 245 96 68 chr5 196921696 196922166 -6163366 - MER113 DNA MER1_type? -35 486 4 468 219 67 50 chr5 196922234 196922353 -6163179 + MIR SINE MIR 32 152 -110 240 224 48 128 chr5 196922368 196922493 -6163039 + MLT1L LTR MaLR 1 115 -500 602 306 99 3 chr5 196922624 196922908 -6162624 + MLT1L LTR MaLR 305 615 0 1232 258 55 59 chr5 196923016 196923528 -6162004 + MLT1J LTR MaLR 1 510 -1 392 325 12 43 chr5 196923782 196923945 -6161587 - MIR3 SINE MIR -50 158 1 185 333 31 105 chr5 196923945 196924100 -6161432 + L3 LINE CR1 1428 1570 -7 201 265 0 0 chr5 196924770 196924819 -6160713 - MIR SINE MIR -72 190 142 459 313 133 5 chr5 196925165 196925376 -6160156 + L3 LINE CR1 1280 1517 -60 439 138 213 0 chr5 196925487 196925581 -6159951 - MIR SINE MIR -72 190 77 291 317 213 0 chr5 196925704 196925868 -6159664 - MIR SINE MIR -3 259 61 263 262 16 0 chr5 196926513 196926574 -6158958 - L2 LINE L2 -1 3271 3210 298 245 28 114 chr5 196927163 196927312 -6158220 - MIR SINE MIR -55 153 38 743 284 139 56 chr5 196927614 196928132 -6157400 + MLT1K LTR MaLR 19 579 -9 308 224 32 24 chr5 196928499 196928596 -6156936 + MIR SINE MIR 49 146 -68 784 194 51 37 chr5 196928769 196928986 -6156546 + L1MC5 LINE L1 7691 7910 -51 569 260 23 16 chr5 196929652 196929840 -6155692 + MIR SINE MIR 2 192 -62 552 272 182 45 chr5 196930204 196930820 -6154712 + L2 LINE L2 2356 3084 -229 1922 237 31 40 chr5 196930829 196931377 -6154155 + LTR55 LTR ERV 1 543 -5 250 214 41 41 chr5 196931389 196931487 -6154045 + L2 LINE L2 3104 3201 -112 443 276 116 30 chr5 196931491 196931765 -6153767 + L1ME1 LINE L1 5361 5653 -589 1843 131 25 0 chr5 196931818 196932122 -6153410 + AluSx SINE Alu 5 315 0 9485 210 66 41 chr5 196932141 196932413 -6153119 + L1MD1 LINE L1 18 282 -6258 815 130 36 0 chr5 196932413 196932551 -6152981 + L1MA3 LINE L1 6163 6305 0 9485 210 66 41 chr5 196932551 196933206 -6152326 + L1MD1 LINE L1 282 919 -5621 1575 111 123 8 chr5 196933206 196933505 -6152027 + AluSg SINE Alu 1 328 0 9485 210 66 41 chr5 196933505 196933825 -6151707 + L1MD1 LINE L1 919 1230 -5310 2212 91 3 0 chr5 196933825 196934133 -6151399 + AluY SINE Alu 1 309 -2 9485 210 66 41 chr5 196934133 196936148 -6149384 + L1MD1 LINE L1 1230 3194 -3346 2647 94 16 5 chr5 196936148 196936519 -6149013 + THE1C LTR MaLR 1 375 0 10610 91 28 54 chr5 196936519 196938022 -6147510 + THE1C-int LTR MaLR 1 1460 -120 2155 118 0 0 chr5 196938022 196938327 -6147205 - AluSc SINE Alu -4 305 1 10610 91 28 54 chr5 196938327 196938445 -6147087 + THE1C-int LTR MaLR 1460 1580 0 2662 102 13 5 chr5 196938445 196938817 -6146715 + THE1C LTR MaLR 1 375 0 9485 210 66 41 chr5 196938817 196939854 -6145678 + L1MD1 LINE L1 3194 4440 -2100 1930 147 0 0 chr5 196939854 196940160 -6145372 + AluSx SINE Alu 5 310 -2 9485 210 66 41 chr5 196940160 196940384 -6145148 + L1MD1 LINE L1 4440 4657 -1883 492 246 7 22 chr5 196940398 196940536 -6144996 - L1M4 LINE L1 -2062 4084 3949 * 3487 228 29 19 chr5 196940532 196941518 -6144014 + L1MD1 LINE L1 4665 5660 -880 47 44 0 0 chr5 196941520 196941588 -6143944 + AT_rich Low_complexity Low_complexity 1 68 0 1104 200 75 59 chr5 196941594 196941899 -6143633 + L1ME1 LINE L1 5852 6161 -5 298 219 0 0 chr5 196941911 196941975 -6143557 + L1MD1 LINE L1 5667 5730 -906 2343 126 85 5 chr5 196941980 196942368 -6143164 - MSTA LTR MaLR -9 419 1 10087 144 26 10 chr5 196942368 196943449 -6142083 - MSTA-int LTR MaLR 0 1651 533 1957 143 0 10 chr5 196943449 196943757 -6141775 - AluSx SINE Alu -5 307 3 10087 144 26 10 chr5 196943757 196944299 -6141233 - MSTA-int LTR MaLR -1118 533 1 2436 134 70 7 chr5 196944299 196944702 -6140830 - MSTA LTR MaLR 0 428 1 4985 174 16 0 chr5 196944702 196945598 -6139934 + L1MD1 LINE L1 5726 6635 -1 310 249 18 65 chr5 196945614 196945742 -6139790 + L1M4 LINE L1 5701 5822 -352 523 225 66 98 chr5 196945845 196946089 -6139443 + MER106A DNA MER1_type 1 236 0 1055 198 33 5 chr5 196946097 196946309 -6139223 - MER20 DNA MER1_type 0 219 2 437 283 43 19 chr5 196946926 196947157 -6138375 + LTR33 LTR ERVL 99 373 -148 186 143 0 0 chr5 196947432 196947467 -6138065 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 1452 206 25 46 chr5 196947577 196947903 -6137629 - MER21B LTR ERV1 -11 852 534 * 2958 199 20 13 chr5 196947901 196948455 -6137077 - MER21B LTR ERV1 -287 576 19 332 221 53 32 chr5 196948453 196948548 -6136984 - MER21B LTR ERV1 -757 106 10 * 359 213 180 53 chr5 196948550 196948700 -6136832 - MIR SINE MIR -77 185 17 241 255 98 29 chr5 196949340 196949442 -6136090 - MIR SINE MIR -113 149 41 360 200 22 11 chr5 196949819 196949909 -6135623 + MIR SINE MIR 34 124 -84 441 271 81 33 chr5 196950068 196950278 -6135254 + MIR SINE MIR 23 242 -20 2350 139 11 0 chr5 196950357 196950716 -6134816 + MER41E LTR ERV1 150 512 0 350 364 0 0 chr5 196950757 196950889 -6134643 - MIR SINE MIR -61 147 16 513 281 101 25 chr5 196950996 196951195 -6134337 + MIR SINE MIR 40 253 -9 360 346 0 9 chr5 196951846 196951953 -6133579 - MIR SINE MIR -137 125 20 208 321 0 0 chr5 196952108 196952189 -6133343 + (TATG)n Simple_repeat Simple_repeat 3 83 0 1202 195 56 0 chr5 196952286 196952537 -6132995 + AluJo SINE Alu 1 265 -47 378 0 0 0 chr5 196952552 196952594 -6132938 + (TA)n Simple_repeat Simple_repeat 2 43 0 414 343 130 25 chr5 196953759 196954190 -6131342 - L2 LINE L2 -584 2730 2255 1393 183 34 4 chr5 196954234 196954496 -6131036 - AluJo SINE Alu -17 295 26 577 331 22 25 chr5 196954541 196954801 -6130731 + MIR SINE MIR 4 260 -2 21 57 0 0 chr5 196954845 196954880 -6130652 + AT_rich Low_complexity Low_complexity 1 35 0 188 219 0 0 chr5 196955400 196955441 -6130091 - MIR3 SINE MIR -13 195 155 489 278 49 14 chr5 196955467 196955611 -6129921 + MIR SINE MIR 33 181 -81 992 264 102 107 chr5 196955611 196955829 -6129703 - MLT1K LTR MaLR -21 567 349 2439 158 21 19 chr5 196955829 196956252 -6129280 + MSTB LTR MaLR 3 426 0 992 264 102 107 chr5 196956252 196956594 -6128938 - MLT1K LTR MaLR -239 349 10 261 219 0 0 chr5 196956656 196956729 -6128803 + (CAT)n Simple_repeat Simple_repeat 2 74 0 786 299 31 31 chr5 196957204 196957555 -6127977 - MLT1K LTR MaLR -13 575 225 249 320 64 24 chr5 196957583 196957708 -6127824 - MLT1K LTR MaLR -456 132 3 511 146 0 0 chr5 196957853 196957935 -6127597 + L1MC4 LINE L1 7960 8041 -1 309 226 95 66 chr5 196958429 196958566 -6126966 + MLT1G1-int LTR MaLR 1574 1714 -21 336 233 190 0 chr5 196958594 196958710 -6126822 + MLT1G1 LTR MaLR 10 147 -443 715 176 28 7 chr5 196958712 196958854 -6126678 - L1MA8 LINE L1 -105 6186 6042 734 268 38 51 chr5 196958862 196959254 -6126278 + MLT1G1 LTR MaLR 182 595 0 268 81 125 17 chr5 196959698 196959756 -6125776 - MLT2B1 LTR ERVL -2 518 397 192 77 0 0 chr5 196959762 196959788 -6125744 + (TA)n Simple_repeat Simple_repeat 1 26 0 2504 172 52 9 chr5 196959817 196960277 -6125255 - MLT2B1 LTR ERVL -40 480 1 896 219 102 5 chr5 196960794 196961009 -6124523 - MER46A DNA MER2_type 0 236 1 374 306 12 19 chr5 196961137 196961297 -6124235 - MLT1K LTR MaLR 0 588 430 4439 110 15 8 chr5 196961743 196962414 -6123118 - L1MC1 LINE L1 -7 6326 5651 261 324 89 20 chr5 196962422 196962569 -6122963 - MIR SINE MIR -55 207 45 769 292 119 39 chr5 196962937 196963431 -6122101 + L2 LINE L2 2770 3313 0 1399 203 35 3 chr5 196963553 196963843 -6121689 - AluJo SINE Alu -13 299 1 255 340 31 0 chr5 196964125 196964222 -6121310 - MIR SINE MIR -54 208 109 237 211 0 35 chr5 196964677 196964734 -6120798 + MIR SINE MIR 77 131 -77 502 271 131 13 chr5 196965013 196965242 -6120290 - MIR SINE MIR 0 262 7 338 263 102 22 chr5 196965330 196965467 -6120065 + MIR SINE MIR 76 223 -39 184 170 106 0 chr5 196965707 196965754 -6119778 - L2 LINE L2 -2 3270 3219 1568 185 90 48 chr5 196965756 196966135 -6119397 + MSTD LTR MaLR 1 395 -1 498 332 95 43 chr5 196966168 196966637 -6118895 - L2 LINE L2 -60 3253 2740 2218 91 7 3 chr5 196966637 196966944 -6118588 + AluY SINE Alu 1 308 -3 498 332 95 43 chr5 196966944 196966974 -6118558 - L2 LINE L2 -573 2740 2713 1566 237 107 43 chr5 196966993 196967010 -6118522 + L1ME3 LINE L1 4831 4845 -1317 2071 144 31 73 chr5 196967010 196967461 -6118071 + MSTB1 LTR MaLR 1 432 0 1566 237 107 43 chr5 196967461 196968145 -6117387 + L1ME3 LINE L1 4845 5620 -542 2100 123 0 3 chr5 196968145 196968453 -6117079 + AluSx SINE Alu 1 307 -5 1566 237 107 43 chr5 196968453 196968764 -6116768 + L1ME3 LINE L1 5620 5910 -252 1399 147 128 20 chr5 196968767 196969062 -6116470 - AluSg1 SINE Alu 0 322 1 263 273 227 0 chr5 196969074 196969184 -6116348 + MIR SINE MIR 125 259 -3 239 261 87 0 chr5 196969662 196969731 -6115801 - L2 LINE L2 -9 3263 3189 235 268 73 37 chr5 196970148 196970230 -6115302 - MER5A DNA MER1_type -22 167 83 * 519 314 124 0 chr5 196970229 196970455 -6115077 + MIR SINE MIR 9 262 0 386 329 26 7 chr5 196970675 196970827 -6114705 + MIR SINE MIR 72 226 -36 711 316 53 42 chr5 196971097 196971528 -6114004 - L2 LINE L2 -52 3261 2826 2286 84 3 7 chr5 196971585 196971895 -6113637 + AluSc SINE Alu 1 309 0 369 325 88 44 chr5 196971954 196972299 -6113233 - L2 LINE L2 -3 3269 2909 417 290 0 0 chr5 196974117 196974217 -6111315 - MIR SINE MIR -79 129 30 430 215 196 38 chr5 196974283 196974441 -6111091 + MIR SINE MIR 72 254 -8 326 302 169 29 chr5 196974456 196974628 -6110904 - L2 LINE L2 -2 3270 3075 489 124 50 224 chr5 196974823 196975024 -6110508 - L1MC5 LINE L1 -55 7906 7741 684 247 19 6 chr5 196976257 196976419 -6109113 - MIR SINE MIR -20 242 79 678 329 35 24 chr5 196977828 196978083 -6107449 + MIR SINE MIR 2 259 -3 277 366 23 7 chr5 196978179 196978363 -6107169 - MIR SINE MIR -61 147 20 317 293 24 30 chr5 196978962 196979126 -6106406 + GA-rich Low_complexity Low_complexity 1 163 0 216 0 0 0 chr5 196979148 196979172 -6106360 + (GA)n Simple_repeat Simple_repeat 1 24 0 285 245 22 44 chr5 196979501 196979645 -6105887 + MIR SINE MIR 34 152 -56 478 322 17 11 chr5 196980613 196980787 -6104745 + MIR SINE MIR 87 261 -1 243 333 11 40 chr5 196981085 196981259 -6104273 - L2 LINE L2 -365 2949 2781 404 267 105 63 chr5 196981320 196981605 -6103927 - L2 LINE L2 -669 2645 2349 836 238 22 4 chr5 196981647 196981878 -6103654 + L1MB5 LINE L1 5930 6164 -10 298 298 35 9 chr5 196982675 196982789 -6102743 - MLT1L LTR MaLR -6 609 493 251 220 17 0 chr5 196982987 196983046 -6102486 - MLT1J LTR MaLR -342 169 110 462 280 71 13 chr5 196983481 196983706 -6101826 - MLT2D LTR ERVL -132 282 45 1415 211 58 53 chr5 196983959 196984236 -6101296 + MLT1E LTR MaLR 74 389 -204 1868 207 28 28 chr5 196984236 196984632 -6100900 - MSTD LTR MaLR 0 396 1 1415 211 58 53 chr5 196984632 196984838 -6100694 + MLT1E LTR MaLR 389 592 -1 2767 210 15 30 chr5 196985345 196986363 -6099169 + L1MB7 LINE L1 4884 5883 -301 2098 54 58 4 chr5 196986484 196986808 -6098724 + AluY SINE Alu 1 311 0 361 164 0 0 chr5 196986808 196986863 -6098669 + MSTA LTR MaLR 374 428 0 279 269 81 55 chr5 196987319 196987590 -6097942 - L1ME LINE L1 -303 5818 5541 1649 185 0 7 chr5 196987883 196988181 -6097351 - AluJb SINE Alu -14 298 3 232 265 0 0 chr5 197039551 197039600 -6045932 + (TG)n Simple_repeat Simple_repeat 1 49 0 412 284 8 8 chr5 197039640 197039767 -6045765 - MIR3 SINE MIR -10 198 72 280 370 10 0 chr5 197039824 197039924 -6045608 - MIR SINE MIR -11 251 151 190 265 118 39 chr5 197040837 197040939 -6044593 + L3 LINE CR1 1316 1425 -152 360 293 24 32 chr5 197041169 197041292 -6044240 - MIR SINE MIR -108 154 33 1484 236 119 37 chr5 197041556 197041937 -6043595 + L1ME3 LINE L1 5162 5510 -652 2099 123 0 7 chr5 197041937 197042246 -6043286 + AluSx SINE Alu 1 307 -5 1484 236 119 37 chr5 197042246 197042557 -6042975 + L1ME3 LINE L1 5510 5910 -252 1441 147 131 16 chr5 197042560 197042856 -6042676 - AluSx SINE Alu 0 325 1 249 273 227 0 chr5 197042868 197042978 -6042554 + MIR SINE MIR 125 259 -3 224 261 87 0 chr5 197043456 197043525 -6042007 - L2 LINE L2 -9 3263 3189 218 268 73 37 chr5 197043941 197044023 -6041509 - MER5A DNA MER1_type -22 167 83 * 478 336 124 0 chr5 197044022 197044248 -6041284 + MIR SINE MIR 9 262 0 355 335 26 7 chr5 197044468 197044620 -6040912 + MIR SINE MIR 72 226 -36 576 289 38 71 chr5 197044891 197045157 -6040375 - L2 LINE L2 -52 3261 3005 227 303 277 41 chr5 197046552 197046747 -6038785 + MIR SINE MIR 20 260 -2 357 332 35 25 chr5 197047016 197047287 -6038245 - L3 LINE CR1 -1 1576 1252 219 213 115 0 chr5 197047273 197047334 -6038198 - L2 LINE L2 0 3272 3205 * 593 259 11 23 chr5 197047374 197047548 -6037984 - L3 LINE CR1 -337 1240 1069 222 37 0 0 chr5 197048328 197048355 -6037177 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 312 354 68 13 chr5 197048635 197048872 -6036660 - L2 LINE L2 -20 3252 3003 204 311 14 14 chr5 197048977 197049051 -6036481 + G-rich Low_complexity Low_complexity 6 79 0 194 313 30 0 chr5 197049184 197049251 -6036281 - L2 LINE L2 -337 2976 2908 418 316 26 20 chr5 197051018 197051170 -6034362 - MIR3 SINE MIR -26 182 30 417 203 196 38 chr5 197051236 197051394 -6034138 + MIR SINE MIR 72 254 -8 290 308 169 29 chr5 197051409 197051581 -6033951 - L2 LINE L2 -2 3270 3075 462 155 46 206 chr5 197051776 197051995 -6033537 - L1MC5 LINE L1 -55 7906 7723 266 297 127 0 chr5 197052358 197052476 -6033056 - MIR3 SINE MIR -39 169 37 333 0 0 0 chr5 197052623 197052660 -6032872 + (TA)n Simple_repeat Simple_repeat 2 38 0 1266 157 4 78 chr5 197052663 197052918 -6032614 - AluJo SINE Alu -76 236 1 701 137 0 0 chr5 197053484 197053586 -6031946 + AluSg/x SINE Alu 197 298 -12 2396 214 46 23 chr5 197059105 197059671 -6025861 - MLT1E LTR MaLR -14 579 1 205 286 232 9 chr5 197060152 197060264 -6025268 - L2 LINE L2 -12 3301 3165 311 254 90 8 chr5 197060316 197060438 -6025094 - L2 LINE L2 -226 3046 2915 292 282 10 19 chr5 197060556 197060659 -6024873 - L2 LINE L2 -530 2784 2683 283 356 67 7 chr5 197060729 197060864 -6024668 - L3 LINE CR1 -5 1572 1430 229 331 49 5 chr5 197061433 197061578 -6023954 - MIR SINE MIR -6 256 105 196 336 74 27 chr5 197061585 197061734 -6023798 + MIR SINE MIR 13 168 -94 238 314 25 50 chr5 197061744 197061865 -6023667 + MIR SINE MIR 137 254 -8 2261 98 3 0 chr5 197061866 197062171 -6023361 + AluSq SINE Alu 1 306 -7 217 217 0 50 chr5 197062216 197062276 -6023256 + GA-rich Low_complexity Low_complexity 4 60 0 872 188 35 6 chr5 197062515 197062685 -6022847 + FRAM SINE Alu 1 166 -10 2397 194 43 6 chr5 197062685 197063155 -6022377 - MLT1F LTR MaLR -30 512 26 182 250 0 0 chr5 197063578 197063618 -6021914 + MIR SINE MIR 218 257 -5 469 244 8 23 chr5 197064120 197064251 -6021281 - MER5B DNA MER1_type 0 178 50 511 289 56 28 chr5 197064920 197065100 -6020432 - L2 LINE L2 0 3313 3129 1768 105 97 0 chr5 197065101 197065392 -6020140 + AluSx SINE Alu 1 316 0 561 262 93 23 chr5 197065905 197066077 -6019455 - MIR3 SINE MIR -21 187 4 461 284 73 34 chr5 197066359 197066563 -6018969 + MLT1K LTR MaLR 376 587 -1 2068 189 45 55 chr5 197066732 197067240 -6018292 + MLT1D LTR MaLR 1 503 -2 185 339 47 78 chr5 197067309 197067695 -6017837 - L2 LINE L2 -41 3231 2858 233 287 259 14 chr5 197067923 197068139 -6017393 - L2 LINE L2 -821 2493 2225 408 304 138 8 chr5 197069034 197069227 -6016305 + MIR SINE MIR 27 249 -13 227 289 13 26 chr5 197069823 197069899 -6015633 + MLT1K LTR MaLR 34 108 -480 278 67 22 0 chr5 197070022 197070067 -6015465 + (TCCCC)n Simple_repeat Simple_repeat 4 49 0 373 333 9 0 chr5 197070074 197070185 -6015347 + MLT1K LTR MaLR 308 419 -169 236 54 54 0 chr5 197071046 197071083 -6014449 + C-rich Low_complexity Low_complexity 2 40 0 188 139 0 23 chr5 197071210 197071253 -6014279 + (CA)n Simple_repeat Simple_repeat 2 43 0 210 320 20 59 chr5 197071330 197071483 -6014049 - L2 LINE L2 -4 3268 3122 629 257 134 0 chr5 197071667 197071846 -6013686 - MIR SINE MIR -16 246 44 195 277 164 43 chr5 197071829 197072174 -6013358 - L2 LINE L2 -274 2998 2607 * 397 221 0 0 chr5 197072391 197072468 -6013064 + L2 LINE L2 3231 3307 -6 226 324 170 51 chr5 197072532 197073368 -6012164 - L2 LINE L2 -902 2412 1478 319 343 68 27 chr5 197073376 197073595 -6011937 - MIR SINE MIR -7 255 28 181 277 31 31 chr5 197073981 197074046 -6011486 - L2 LINE L2 -967 2347 2283 618 193 17 0 chr5 197074126 197074245 -6011287 + L2 LINE L2 3193 3313 0 300 235 10 49 chr5 197074358 197074460 -6011072 + GA-rich Low_complexity Low_complexity 1 98 0 237 342 13 0 chr5 197074586 197074662 -6010870 - MIR SINE MIR -103 105 29 279 316 143 12 chr5 197074994 197075162 -6010370 - MIR SINE MIR -48 214 25 22 0 0 0 chr5 197075795 197075817 -6009715 + AT_rich Low_complexity Low_complexity 1 22 0 339 261 10 51 chr5 197076186 197076339 -6009193 - MIR3 SINE MIR -67 141 15 207 286 55 11 chr5 197076791 197076882 -6008650 + L2 LINE L2 2940 3034 -238 367 283 138 0 chr5 197076909 197077047 -6008485 - MIR SINE MIR -8 254 98 2112 102 0 7 chr5 197077047 197077340 -6008192 + AluSx SINE Alu 1 291 -21 361 349 8 0 chr5 197078073 197078205 -6007327 - Charlie8 DNA MER1_type -2193 224 92 3068 174 24 45 chr5 197078222 197078449 -6007083 - L1MB3 LINE L1 -2 6181 5951 2307 81 7 7 chr5 197078449 197078759 -6006773 - AluSg SINE Alu 0 310 1 3068 174 24 45 chr5 197078759 197079050 -6006482 - L1MB3 LINE L1 -232 5951 5675 2190 88 0 3 chr5 197079050 197079382 -6006150 - AluSx SINE Alu 0 331 1 3068 174 24 45 chr5 197079382 197079486 -6006046 - L1MB3 LINE L1 -508 5675 5570 673 225 47 0 chr5 197079509 197079678 -6005854 + MER104 DNA MER2_type 1 177 -3 754 245 175 114 chr5 197080791 197081310 -6004222 + MLT1K LTR MaLR 15 565 -23 2132 115 0 10 chr5 197081322 197081636 -6003896 + AluSx SINE Alu 1 311 -1 1543 286 30 7 chr5 197081757 197082191 -6003341 + LTR16A LTR ERVL 7 450 0 278 309 36 12 chr5 197082191 197082275 -6003257 + HERV16 LTR ERVL 1 86 -4910 1033 241 95 41 chr5 197082303 197082672 -6002860 + HERV16 LTR ERVL 164 552 -4444 887 132 0 0 chr5 197082673 197082802 -6002730 + AluSg SINE Alu 1 129 -181 1513 103 0 56 chr5 197082802 197083034 -6002498 + AluSg/x SINE Alu 82 300 -12 2226 271 68 10 chr5 197083056 197083742 -6001790 + HERV16 LTR ERVL 547 1272 -3724 2035 145 36 3 chr5 197083875 197084212 -6001320 - MLT1A1 LTR MaLR -17 348 1 679 283 111 24 chr5 197084279 197084611 -6000921 + HERV16 LTR ERVL 1569 1929 -3067 2474 287 124 26 chr5 197084697 197085049 -6000483 + HERV16 LTR ERVL 2107 2423 -2892 1958 138 14 7 chr5 197085049 197085338 -6000194 + AluSx SINE Alu 1 291 -21 2474 287 124 26 chr5 197085338 197086197 -5999335 + HERV16 LTR ERVL 2423 3410 -1905 361 347 63 42 chr5 197086438 197086768 -5998764 + HERV16 LTR ERVL 4054 4601 -606 315 263 18 35 chr5 197086984 197087098 -5998434 - MIR SINE MIR -70 192 81 264 307 74 3 chr5 197087378 197087568 -5997964 + MIR SINE MIR 35 245 -17 264 283 150 64 chr5 197087997 197088184 -5997348 - L2 LINE L2 -19 3294 3092 265 306 16 16 chr5 197088531 197088655 -5996877 + CT-rich Low_complexity Low_complexity 2 125 0 2359 117 0 0 chr5 197088669 197088978 -5996554 - AluSq SINE Alu -4 309 1 180 302 198 9 chr5 197089633 197089739 -5995793 + MIR SINE MIR 87 212 -50 260 220 17 0 chr5 197089772 197089831 -5995701 - MLT1K LTR MaLR -12 576 517 279 336 7 42 chr5 197090077 197090220 -5995312 - MLT1K LTR MaLR -417 171 34 399 321 57 88 chr5 197090295 197090557 -5994975 + L2 LINE L2 3019 3272 0 279 223 11 49 chr5 197090557 197090741 -5994791 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 382 324 87 6 chr5 197090762 197090935 -5994597 - L2 LINE L2 -954 2360 2174 321 214 50 20 chr5 197091708 197091807 -5993725 - MIR3 SINE MIR -33 175 73 263 326 93 26 chr5 197091919 197092112 -5993420 - MIR SINE MIR -1 261 56 249 296 25 0 chr5 197092209 197092290 -5993242 + MIR SINE MIR 66 148 -114 2308 100 17 0 chr5 197092390 197092691 -5992841 + AluSc SINE Alu 1 306 -3 252 0 0 0 chr5 197093213 197093241 -5992291 + (A)n Simple_repeat Simple_repeat 1 28 0 1516 281 63 12 chr5 197094118 197094624 -5990908 - MLT1K LTR MaLR -22 566 35 2040 95 14 25 chr5 197094754 197095061 -5990471 + AluSx SINE Alu 1 304 0 192 222 22 0 chr5 197095193 197095238 -5990294 - L2 LINE L2 -82 3190 3145 454 301 286 9 chr5 197095551 197095883 -5989649 + L3 LINE CR1 1142 1565 -12 229 315 0 0 chr5 197095904 197095977 -5989555 + MIR SINE MIR 53 125 -83 312 313 70 6 chr5 197096477 197096638 -5988894 - MIR SINE MIR -72 190 20 255 227 128 32 chr5 197097004 197097129 -5988403 - MIR SINE MIR -63 145 6 420 269 46 8 chr5 197097560 197097690 -5987842 - MIR SINE MIR -77 185 51 274 305 0 0 chr5 197098384 197098479 -5987053 + (TG)n Simple_repeat Simple_repeat 2 96 0 385 234 117 31 chr5 197098572 197098700 -5986832 - MIR3 SINE MIR -63 145 7 274 345 25 94 chr5 197098957 197099232 -5986300 - L2 LINE L2 -85 3187 2932 255 291 23 105 chr5 197099506 197099678 -5985854 - MIR SINE MIR -23 239 82 2251 132 0 3 chr5 197100156 197100466 -5985066 + AluSq SINE Alu 1 309 -4 313 278 95 91 chr5 197100603 197100855 -5984677 - L2 LINE L2 -53 3219 2967 430 263 76 45 chr5 197101352 197101564 -5983968 + MIR SINE MIR 2 216 -46 449 300 62 65 chr5 197101625 197101875 -5983657 - L2 LINE L2 -1 3271 3020 2144 101 0 11 chr5 197101875 197102195 -5983337 + AluY SINE Alu 1 317 0 449 300 62 65 chr5 197102195 197102296 -5983236 - L2 LINE L2 -252 3020 2920 1023 164 49 13 chr5 197102639 197102865 -5982667 + L1 LINE L1 3533 3766 -2380 2286 126 0 3 chr5 197102989 197103323 -5982209 - AluSx SINE Alu 0 333 1 2501 46 0 0 chr5 197103353 197103672 -5981860 + AluY SINE Alu 1 319 0 290 328 48 11 chr5 197103729 197103918 -5981614 - MLT1K LTR MaLR -114 474 279 196 289 0 0 chr5 197104142 197104194 -5981338 - MIR SINE MIR -100 162 111 192 234 0 0 chr5 197104421 197104468 -5981064 - MIR SINE MIR -84 124 78 327 317 20 0 chr5 197104992 197105093 -5980439 + MIR SINE MIR 48 150 -112 356 304 12 50 chr5 197105126 197105287 -5980245 - L2 LINE L2 -40 3273 3119 2410 45 38 7 chr5 197105556 197105848 -5979684 - AluY SINE Alu -10 301 1 579 323 133 11 chr5 197106365 197106908 -5978624 - L2 LINE L2 -5 3267 2656 262 329 67 33 chr5 197106890 197107100 -5978432 - L2 LINE L2 -26 3246 3030 * 828 264 17 26 chr5 197107177 197107408 -5978124 + MIR SINE MIR 12 240 -22 241 204 0 0 chr5 197107611 197107665 -5977867 - MIR SINE MIR -87 121 68 289 348 62 9 chr5 197107682 197107794 -5977738 + L2 LINE L2 3142 3259 -13 205 236 333 0 chr5 197108348 197108420 -5977112 + MIR SINE MIR 56 151 -111 185 211 0 0 chr5 197108445 197108483 -5977049 + L2 LINE L2 3218 3255 -17 2228 121 10 13 chr5 197108497 197108810 -5976722 - AluSx SINE Alu 0 312 1 259 294 54 22 chr5 197108820 197108912 -5976620 - MIR SINE MIR -74 188 94 * 600 324 175 7 chr5 197108899 197109342 -5976190 - L2 LINE L2 -2 3311 2793 784 153 68 6 chr5 197109662 197109825 -5975707 + MER96B DNA MER1_type? 6 178 -239 195 292 28 14 chr5 197110139 197110211 -5975321 + MIR SINE MIR 80 152 -110 535 224 171 7 chr5 197110261 197110413 -5975119 + MER5A DNA MER1_type 4 180 -9 185 261 22 0 chr5 197110434 197110480 -5975052 + L2 LINE L2 3213 3259 -13 434 213 110 65 chr5 197110606 197110761 -5974771 + MIR SINE MIR 87 248 -14 199 265 41 0 chr5 197110940 197110989 -5974543 - MIR SINE MIR -65 143 93 290 362 17 0 chr5 197111105 197111221 -5974311 - MIR SINE MIR -59 149 32 333 289 144 17 chr5 197111786 197112057 -5973475 + L2 LINE L2 2738 3050 -263 2246 92 7 30 chr5 197112172 197112475 -5973057 - AluSp SINE Alu -17 296 1 192 333 15 0 chr5 197112687 197112753 -5972779 + L2 LINE L2 3198 3264 -49 304 263 21 42 chr5 197112943 197113038 -5972494 - L2 LINE L2 -1 3271 3179 305 256 0 13 chr5 197113272 197113350 -5972182 + L2 LINE L2 3197 3273 -40 258 261 15 0 chr5 197113386 197113451 -5972081 - L2 LINE L2 0 3313 3248 330 250 139 14 chr5 197113803 197113941 -5971591 + MIR3 SINE MIR 10 166 -62 244 282 14 0 chr5 197113988 197114059 -5971473 - L2 LINE L2 -6 3266 3195 312 180 0 0 chr5 197114222 197114283 -5971249 - MIR SINE MIR -94 168 108 536 232 52 19 chr5 197114940 197115095 -5970437 - MIR SINE MIR -50 212 53 256 143 0 20 chr5 197115120 197115169 -5970363 + L2 LINE L2 3225 3272 0 220 231 88 44 chr5 197115176 197115267 -5970265 - MIR3 SINE MIR -105 103 9 615 257 14 0 chr5 197115890 197116038 -5969494 - MIR3 SINE MIR -37 171 22 205 382 18 9 chr5 197116147 197116257 -5969275 + L2 LINE L2 3155 3265 -7 274 203 152 0 chr5 197116741 197116820 -5968712 + MIR SINE MIR 170 260 -2 237 146 0 0 chr5 197117224 197117272 -5968260 + (ACTTG)n Simple_repeat Simple_repeat 1 48 0 235 321 97 13 chr5 197118587 197118710 -5966822 + MIR SINE MIR 2 132 -76 375 218 157 41 chr5 197118900 197119047 -5966485 - MER113 DNA MER1_type? -357 164 1 194 250 47 0 chr5 197119051 197119115 -5966417 + MIR SINE MIR 195 261 -1 786 278 149 22 chr5 197119350 197119799 -5965733 - MER113 DNA MER1_type? -1 520 15 291 315 16 8 chr5 197120281 197120408 -5965124 - LTR67 LTR ERVL -1 556 429 408 314 11 40 chr5 197120562 197120737 -5964795 - MLT1K LTR MaLR -417 171 2 309 329 93 42 chr5 197121018 197121328 -5964204 - MER102a DNA MER1_type 0 330 5 290 243 0 0 chr5 197121335 197121405 -5964127 + L2 LINE L2 2990 3059 -213 532 244 115 96 chr5 197121650 197121852 -5963680 - MLT1I LTR MaLR -20 389 177 2372 96 0 0 chr5 197121852 197122143 -5963389 - AluSc SINE Alu -18 291 1 532 244 115 96 chr5 197122143 197122252 -5963280 - MLT1I LTR MaLR -232 177 72 378 293 20 27 chr5 197122892 197123039 -5962493 + MIR SINE MIR 20 165 -97 222 264 14 28 chr5 197123163 197123235 -5962297 - L3 LINE CR1 -84 1493 1423 2410 258 73 17 chr5 197124145 197124328 -5961204 - L1ME3A LINE L1 -11 6159 5988 2497 74 3 16 chr5 197124328 197124640 -5960892 - AluSc SINE Alu -1 308 1 2410 258 73 17 chr5 197124640 197125235 -5960297 - L1ME3A LINE L1 -182 5988 5337 197 339 110 8 chr5 197125960 197126087 -5959445 + L2 LINE L2 2721 2860 -454 293 325 41 16 chr5 197126146 197126269 -5959263 + L2 LINE L2 3173 3298 -15 946 229 9 14 chr5 197126620 197126824 -5958708 + MLT1K LTR MaLR 86 290 -298 594 75 0 0 chr5 197126824 197126904 -5958628 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 660 99 16 16 chr5 197126913 197127034 -5958498 + (TTTC)n Simple_repeat Simple_repeat 3 123 0 573 184 147 7 chr5 197127036 197127172 -5958360 - AluJo/FRAM SINE Alu -2 310 156 * 654 110 0 0 chr5 197127167 197127258 -5958274 - AluJ/FLAM SINE Alu -220 92 2 832 268 57 12 chr5 197127277 197127523 -5958009 + MLT1K LTR MaLR 301 557 -31 476 293 69 6 chr5 197128541 197128715 -5956817 + LTR33 LTR ERVL 10 194 -327 226 261 54 0 chr5 197129065 197129157 -5956375 - MLT1J2 LTR MaLR -307 143 47 423 268 28 20 chr5 197129319 197129467 -5956065 + MIR SINE MIR 30 177 -56 404 309 163 12 chr5 197129576 197129713 -5955819 - L2 LINE L2 -6 3307 3192 2155 144 11 3 chr5 197129713 197130073 -5955459 + MER47A DNA MER2_type 4 366 0 404 309 163 12 chr5 197130073 197130420 -5955112 - L2 LINE L2 -121 3192 2734 504 291 75 15 chr5 197131008 197131207 -5954325 + MIR SINE MIR 46 256 -6 786 217 49 0 chr5 197131214 197131398 -5954134 - MIR SINE MIR -54 208 16 1463 262 128 28 chr5 197131564 197132057 -5953475 + MLT1K LTR MaLR 41 582 -6 432 341 91 0 chr5 197132057 197132233 -5953299 - MIR SINE MIR -39 223 32 490 333 20 7 chr5 197132468 197132621 -5952911 + L2 LINE L2 3118 3272 0 476 246 29 7 chr5 197132889 197133027 -5952505 - MIR SINE MIR -16 246 106 324 262 41 16 chr5 197133329 197133451 -5952081 + MIR3 SINE MIR 5 129 -79 336 343 54 0 chr5 197133532 197133736 -5951796 - MIR SINE MIR -27 235 21 761 287 79 34 chr5 197134172 197134552 -5950980 + MER113 DNA MER1_type? 1 397 -124 355 300 27 53 chr5 197134824 197134974 -5950558 + MIR SINE MIR 97 242 -20 194 273 61 0 chr5 197135132 197135198 -5950334 + MIR SINE MIR 109 178 -84 214 273 18 0 chr5 197135913 197135968 -5949564 - MIR SINE MIR -110 152 97 567 265 41 0 chr5 197136770 197136917 -5948615 + MER103 DNA DNA 9 161 -5 817 291 68 22 chr5 197138359 197138922 -5946610 + L2 LINE L2 2678 3270 -43 417 320 62 16 chr5 197138926 197139170 -5946362 + L2 LINE L2 2830 3084 -188 231 170 21 0 chr5 197139437 197139484 -5946048 + L2 LINE L2 3221 3268 -4 211 284 0 37 chr5 197140240 197140321 -5945211 + L2 LINE L2 2682 2759 -555 286 313 50 20 chr5 197140424 197140572 -5944960 - MIR SINE MIR -70 138 40 300 306 10 10 chr5 197140781 197140879 -5944653 + MIR SINE MIR 36 133 -75 603 295 18 12 chr5 197140989 197141155 -5944377 - MIR3 SINE MIR -27 181 15 238 356 0 0 chr5 197141651 197141724 -5943808 + MIR SINE MIR 37 109 -153 * 648 257 177 24 chr5 197141720 197142265 -5943267 - L2 LINE L2 0 3313 2684 570 310 134 41 chr5 197142647 197143111 -5942421 + L2 LINE L2 2804 3310 -3 330 315 140 6 chr5 197145016 197145194 -5940338 + MIR SINE MIR 50 251 -11 398 263 183 11 chr5 197145564 197145739 -5939793 - MIR SINE MIR -56 206 2 223 301 78 19 chr5 197146423 197146526 -5939006 + MIR SINE MIR 38 146 -62 2148 82 4 4 chr5 197147883 197148205 -5937327 + AluSx SINE Alu 1 322 0 677 194 8 45 chr5 197148273 197148407 -5937125 + FLAM_A SINE Alu 1 129 -4 1153 161 5 6 chr5 197198575 197199142 -5886390 - ALR/Alpha Satellite centromeric -1 566 1 1147 139 0 0 chr5 197199246 197199788 -5885744 - ALR/Alpha Satellite centromeric 0 542 1 1222 125 1 10 chr5 197199896 197200788 -5884744 - ALR/Alpha Satellite centromeric 0 883 1 1260 152 9 15 chr5 197200889 197203194 -5882338 + ALR/Alpha Satellite centromeric 1 2292 -66 1153 123 4 7 chr5 197203342 197205280 -5880252 + ALR/Alpha Satellite centromeric 1 2521 -217 4847 47 0 0 chr5 197205280 197205872 -5879660 + L1PA3 LINE L1 5561 6152 -3 1153 123 4 7 chr5 197205872 197206027 -5879505 + ALR/Alpha Satellite centromeric 2521 2675 -63 861 139 4 17 chr5 197206103 197206388 -5879144 + ALR/Alpha Satellite centromeric 1 281 -11 829 177 143 10 chr5 197206497 197206706 -5878826 - MSTA LTR MaLR -191 237 1 783 240 52 37 chr5 197206710 197207035 -5878497 - L1MC4 LINE L1 -164 7878 7549 281 130 0 0 chr5 197207348 197207394 -5878138 - MLT2F LTR ERVL 0 663 618 40 97 0 0 chr5 197207568 197207692 -5877840 + AT_rich Low_complexity Low_complexity 1 124 0 1934 138 4 0 chr5 197207695 197207970 -5877562 + AluSx SINE Alu 6 281 -31 1850 122 3 27 chr5 197208250 197208546 -5876986 + AluSx SINE Alu 1 289 -23 744 191 32 45 chr5 197208920 197209140 -5876392 + L1MB8 LINE L1 5888 6104 -74 583 248 73 46 chr5 197209161 197209271 -5876261 + L2 LINE L2 3090 3196 -117 2347 103 3 6 chr5 197209271 197209583 -5875949 + AluSp SINE Alu 1 311 -2 583 248 73 46 chr5 197209583 197209690 -5875842 + L2 LINE L2 3196 3313 0 1099 136 6 18 chr5 197209692 197209861 -5875671 - AluJb SINE Alu -10 302 136 212 206 446 0 chr5 197209863 197209955 -5875577 - MIR SINE MIR -115 147 15 294 302 65 29 chr5 197210178 197210317 -5875215 + MIR SINE MIR 84 227 -35 465 222 79 63 chr5 197210821 197211010 -5874522 + Charlie8 DNA MER1_type 73 264 -2153 331 319 35 0 chr5 197211118 197211234 -5874298 - MIR SINE MIR -70 192 73 229 318 191 0 chr5 197211345 197211471 -5874061 + MIR SINE MIR 24 173 -89 852 213 62 4 chr5 197211904 197212144 -5873388 + HAL1 LINE L1 125 378 -2129 391 188 95 47 chr5 197212242 197212412 -5873120 + L1MC4 LINE L1 7311 7593 -449 228 200 73 0 chr5 197212382 197212437 -5873095 + L1MC4a LINE L1 7521 7579 -229 * 902 259 40 16 chr5 197212513 197212688 -5872844 + MLT1F1 LTR MaLR 1 170 -397 192 40 0 0 chr5 197212688 197212713 -5872819 + (TC)n Simple_repeat Simple_repeat 1 25 0 306 0 0 0 chr5 197212716 197212750 -5872782 + (CA)n Simple_repeat Simple_repeat 1 34 0 902 259 40 16 chr5 197212750 197213046 -5872486 + MLT1F1 LTR MaLR 171 567 0 286 244 0 79 chr5 197213080 197213207 -5872325 + L1MC4 LINE L1 7781 7897 -145 237 33 0 0 chr5 197213232 197213262 -5872270 + (CA)n Simple_repeat Simple_repeat 1 30 0 285 256 24 40 chr5 197213323 197213448 -5872084 + L1MEc LINE L1 3 125 -6271 2109 119 0 3 chr5 197213448 197213734 -5871798 + AluSx SINE Alu 1 285 -27 233 127 55 0 chr5 197213734 197213789 -5871743 + (TA)n Simple_repeat Simple_repeat 1 58 0 592 278 30 20 chr5 197213790 197213988 -5871544 + L1MEc LINE L1 109 308 -6088 2022 218 80 63 chr5 197214217 197214365 -5871167 + L1MEc LINE L1 318 462 -5934 1113 151 0 6 chr5 197214365 197214537 -5870995 + FAM SINE Alu 1 171 -4 2022 218 80 63 chr5 197214537 197215009 -5870523 + L1MEc LINE L1 462 960 -5436 1969 157 7 0 chr5 197215009 197215303 -5870229 + AluSx SINE Alu 1 296 -16 2022 218 80 63 chr5 197215303 197215553 -5869979 + L1MEc LINE L1 960 1204 -5192 1435 257 62 4 chr5 197215532 197216015 -5869517 + L1MC2 LINE L1 3400 3910 -2305 * 4951 177 55 50 chr5 197217132 197219637 -5865895 + L1MC2 LINE L1 3832 6344 0 3499 233 33 42 chr5 197219635 197220576 -5864956 + L1MEc LINE L1 1196 2144 -4071 * 2003 153 0 10 chr5 197220576 197220884 -5864648 + AluSx SINE Alu 1 305 -7 3499 233 33 42 chr5 197220884 197220910 -5864622 + L1MEc LINE L1 2144 2169 -4046 1012 88 0 19 chr5 197220910 197221070 -5864462 + L1MA5A LINE L1 6141 6297 0 3499 233 33 42 chr5 197221070 197222070 -5863462 + L1MEc LINE L1 2169 3105 -3110 1464 167 110 25 chr5 197222070 197222351 -5863181 + AluJb SINE Alu 2 306 -6 3499 233 33 42 chr5 197222351 197222433 -5863099 + L1MEc LINE L1 3105 3186 -3029 1300 122 0 0 chr5 197222435 197222607 -5862925 + AluSx SINE Alu 1 172 -140 3206 226 28 24 chr5 197222837 197223431 -5862101 + L1MEc LINE L1 3332 3922 -2293 2212 99 10 3 chr5 197223431 197223723 -5861809 + AluSx SINE Alu 1 294 -18 3206 226 28 24 chr5 197223723 197224119 -5861413 + L1MEc LINE L1 3922 4329 -1886 186 43 0 0 chr5 197224119 197224142 -5861390 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3206 226 28 24 chr5 197224142 197224154 -5861378 + L1MEc LINE L1 4329 4339 -1876 3780 147 7 30 chr5 197224155 197224184 -5861348 + L1MB3 LINE L1 5400 5428 -755 1985 154 3 3 chr5 197224184 197224490 -5861042 + AluJb SINE Alu 1 306 -6 3780 147 7 30 chr5 197224490 197225182 -5860350 + L1MB3 LINE L1 5428 6104 -79 2464 135 46 68 chr5 197225182 197225699 -5859833 + MER4B LTR ERV1 1 506 -104 3254 163 164 51 chr5 197225702 197226619 -5858913 + LTR28 LTR ERV1 1 1020 0 468 138 172 0 chr5 197226619 197226706 -5858826 + MER4A LTR ERV1 563 664 0 495 105 0 0 chr5 197226706 197226782 -5858750 + L1MB2 LINE L1 6089 6164 -7 335 317 18 18 chr5 197226922 197227089 -5858443 + L1ME4a LINE L1 5652 5818 -303 280 204 152 30 chr5 197227163 197227295 -5858237 + L1ME4a LINE L1 5962 6109 -12 3763 183 49 40 chr5 197227324 197228361 -5857171 + L1MB3 LINE L1 4344 5370 -882 2049 98 10 23 chr5 197228361 197228666 -5856866 + AluSx SINE Alu 1 301 -11 2180 109 6 29 chr5 197228668 197228980 -5856552 + AluSq SINE Alu 1 305 -8 3763 183 49 40 chr5 197228980 197229284 -5856248 + L1MB3 LINE L1 5370 5670 -582 2203 113 7 3 chr5 197229284 197229584 -5855948 - AluSx SINE Alu -11 301 1 3763 183 49 40 chr5 197229584 197230087 -5855445 + L1MB3 LINE L1 5670 6217 -35 1454 253 47 49 chr5 197230122 197230635 -5854897 - MER21B LTR ERV1 -60 803 292 1978 217 37 22 chr5 197230645 197231134 -5854398 - LTR31 LTR ERV1 -15 604 109 504 223 211 0 chr5 197231262 197231428 -5854104 - MER21B LTR ERV1 -568 295 95 399 184 0 13 chr5 197231526 197231602 -5853930 - MER21B LTR ERV1 -777 86 12 3172 116 17 28 chr5 197232409 197232992 -5852540 - LTR10C LTR ERV1 0 529 7 533 73 0 0 chr5 197234602 197234670 -5850862 + AluS SINE Alu 1 68 -245 752 173 6 37 chr5 197234832 197234994 -5850538 + AluSg/x SINE Alu 134 290 -19 206 118 0 0 chr5 197235047 197235081 -5850451 + (T)n Simple_repeat Simple_repeat 1 34 0 289 227 82 45 chr5 197235362 197235472 -5850060 - MLT1J2 LTR MaLR -300 150 37 1009 183 0 86 chr5 197236378 197236545 -5848987 + L1M4 LINE L1 5045 5180 -966 1414 109 48 13 chr5 197236545 197236775 -5848757 + L1MA5A LINE L1 6060 6297 0 1009 183 0 86 chr5 197236775 197236886 -5848646 + L1M4 LINE L1 5180 5299 -847 884 203 95 51 chr5 197236892 197236961 -5848571 + L1M4 LINE L1 3689 3753 -2393 2159 101 0 49 chr5 197236961 197237287 -5848245 + AluSq SINE Alu 1 310 -3 884 203 95 51 chr5 197237287 197237532 -5848000 + L1M4 LINE L1 3753 4017 -2129 279 0 0 0 chr5 197237532 197237563 -5847969 + (A)n Simple_repeat Simple_repeat 1 31 0 1218 184 0 14 chr5 197237577 197237789 -5847743 - AluJb SINE Alu -19 293 85 1382 165 11 21 chr5 197237795 197238074 -5847458 - AluSx SINE Alu 0 312 37 3821 242 61 32 chr5 197238330 197239680 -5845852 + L1ME1 LINE L1 3146 4544 -1602 2173 66 77 3 chr5 197239680 197239966 -5845566 - AluSq SINE Alu -6 307 1 3821 242 61 32 chr5 197239966 197240103 -5845429 + L1ME1 LINE L1 4544 4676 -1470 1931 234 64 16 chr5 197240118 197240134 -5845398 + L1ME1 LINE L1 5443 5457 -709 530 101 13 0 chr5 197240134 197240213 -5845319 + MADE1 DNA Mariner 1 80 0 1931 234 64 16 chr5 197240213 197240835 -5844697 + L1ME1 LINE L1 5457 6162 -4 816 174 144 71 chr5 197240845 197241074 -5844458 + L1MC5 LINE L1 7357 7568 -393 1948 139 27 7 chr5 197241074 197241368 -5844164 + AluSx SINE Alu 2 301 -11 816 174 144 71 chr5 197241368 197241453 -5844079 + L1MC5 LINE L1 7568 7700 -261 1877 149 10 20 chr5 197241453 197241754 -5843778 - AluJb SINE Alu -14 298 1 816 174 144 71 chr5 197241754 197241777 -5843755 + L1MC5 LINE L1 7700 7720 -241 378 94 0 0 chr5 197241865 197241918 -5843614 - MADE1 DNA Mariner 0 80 28 382 120 0 0 chr5 197241918 197241968 -5843564 - Alu SINE Alu -252 51 2 342 87 0 0 chr5 197242035 197242081 -5843451 - MADE1 DNA Mariner -34 46 1 28 0 0 0 chr5 197242116 197242144 -5843388 + AT_rich Low_complexity Low_complexity 1 28 0 2335 110 0 0 chr5 197242414 197242715 -5842817 + AluSx SINE Alu 1 301 -11 2035 109 18 3 chr5 197242724 197243008 -5842524 + AluSx SINE Alu 1 288 -24 260 310 70 29 chr5 197243128 197243299 -5842233 - MLT1K LTR MaLR -285 303 126 498 291 15 0 chr5 197243525 197243659 -5841873 - MLT1K LTR MaLR -324 264 129 397 319 75 0 chr5 197243996 197244156 -5841376 + MIR SINE MIR 90 261 -1 531 250 23 0 chr5 197245067 197245199 -5840333 + MIR SINE MIR 49 183 -79 3870 266 60 25 chr5 197245312 197246824 -5838708 + L1ME1 LINE L1 34 1599 -4797 3073 149 43 20 chr5 197246854 197247643 -5837889 + L1MA4A LINE L1 4808 5603 -700 2324 121 14 29 chr5 197248038 197248404 -5837128 + L1MA4A LINE L1 5884 6245 -58 1924 190 133 115 chr5 197248404 197249215 -5836317 - LTR1B LTR ERV1 0 826 1 2324 121 14 29 chr5 197249215 197249263 -5836269 + L1MA4A LINE L1 6245 6292 -11 3044 204 72 34 chr5 197249271 197249416 -5836116 + L1ME1 LINE L1 4601 4739 -1496 435 38 0 0 chr5 197249416 197249469 -5836063 + (CA)n Simple_repeat Simple_repeat 1 53 0 3044 204 72 34 chr5 197249469 197250649 -5834883 + L1ME1 LINE L1 4739 5975 -260 732 141 0 16 chr5 197250649 197250777 -5834755 + L1MA4 LINE L1 4134 4259 -1887 * 1567 166 36 22 chr5 197250776 197251059 -5834473 + L1MA4 LINE L1 5787 6086 -85 2201 106 0 10 chr5 197251059 197251351 -5834181 - AluSx SINE Alu -23 289 1 1567 166 36 22 chr5 197251351 197251432 -5834100 + L1MA4 LINE L1 6086 6164 -7 668 239 45 93 chr5 197251450 197251739 -5833793 + L1ME1 LINE L1 5960 6234 -1 473 254 0 0 chr5 197251804 197251926 -5833606 - L1MD3 LINE L1 -20 7975 7854 259 292 62 45 chr5 197252087 197252265 -5833267 + L2 LINE L2 2246 2426 -888 367 315 8 8 chr5 197252985 197253179 -5832353 + (TGGA)n Simple_repeat Simple_repeat 1 194 0 220 289 48 36 chr5 197253199 197253282 -5832250 + L2 LINE L2 3167 3250 -22 279 361 56 7 chr5 197253326 197253470 -5832062 + MIR3 SINE MIR 30 180 -28 212 245 0 19 chr5 197254042 197254095 -5831437 - MIR SINE MIR -175 87 36 348 296 15 30 chr5 197254264 197254399 -5831133 - MIR SINE MIR -112 150 18 901 280 69 16 chr5 197254655 197254959 -5830573 + MLT1K LTR MaLR 268 587 -1 1188 203 19 16 chr5 197255569 197255825 -5829707 - MIR SINE MIR -1 261 5 289 220 193 9 chr5 197256032 197256141 -5829391 + MIR SINE MIR 99 227 -35 599 243 73 29 chr5 197257046 197257252 -5828280 - MIR SINE MIR 0 262 48 296 239 231 0 chr5 197257318 197257368 -5828164 + MER5A DNA MER1_type 30 67 -122 2040 98 7 46 chr5 197257368 197257675 -5827857 + AluSq SINE Alu 14 308 -5 296 239 231 0 chr5 197257675 197257754 -5827778 + MER5A DNA MER1_type 67 189 0 2200 93 33 3 chr5 197258430 197258730 -5826802 + AluSx SINE Alu 2 310 -2 287 316 45 30 chr5 197259437 197259570 -5825962 - L2 LINE L2 0 3272 3138 201 286 0 48 chr5 197259745 197259829 -5825703 - L2 LINE L2 -546 2768 2689 222 240 67 13 chr5 197259868 197259943 -5825589 + L2 LINE L2 3193 3271 -1 186 303 61 0 chr5 197260176 197260242 -5825290 + MIR SINE MIR 75 144 -118 358 246 206 44 chr5 197260445 197260693 -5824839 - L3 LINE CR1 -963 614 327 287 266 195 20 chr5 197261198 197261406 -5824126 - MIR SINE MIR -14 248 1 343 277 69 23 chr5 197261967 197262097 -5823435 - MIR SINE MIR -15 247 112 210 300 193 13 chr5 197263753 197263903 -5821629 + MIR SINE MIR 71 247 -15 333 168 179 0 chr5 197264059 197264154 -5821378 + L1ME4a LINE L1 5974 6085 -36 21 0 0 0 chr5 197264488 197264509 -5821023 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr5 197264596 197264633 -5820899 + AT_rich Low_complexity Low_complexity 1 37 0 400 242 172 6 chr5 197265214 197265371 -5820161 - MIR SINE MIR -49 213 31 21 0 0 0 chr5 197265702 197265723 -5819809 + AT_rich Low_complexity Low_complexity 1 21 0 240 298 28 72 chr5 197266664 197266845 -5818687 + HAL1b LINE L1 364 536 -812 1217 204 84 89 chr5 197267502 197267645 -5817887 + L1MC5 LINE L1 6476 6618 -1343 324 0 0 0 chr5 197267645 197267681 -5817851 + (CA)n Simple_repeat Simple_repeat 2 37 0 1217 204 84 89 chr5 197267681 197267759 -5817773 + L1MC5 LINE L1 6618 6695 -1266 1803 126 61 38 chr5 197267759 197268052 -5817480 - AluSx SINE Alu -12 300 1 1217 204 84 89 chr5 197268052 197268483 -5817049 + L1MC5 LINE L1 6695 7141 -820 478 296 46 15 chr5 197268684 197268880 -5816652 + L1ME3A LINE L1 5962 6163 -7 565 322 17 60 chr5 197269323 197269621 -5815911 - L2 LINE L2 -1 3271 2987 1721 104 12 4 chr5 197269621 197269870 -5815662 + AluSp SINE Alu 49 299 -14 199 244 85 148 chr5 197270577 197270714 -5814818 - MIR SINE MIR -70 192 67 2153 44 0 4 chr5 197270714 197270962 -5814570 - AluY SINE Alu -64 247 1 199 244 85 148 chr5 197270962 197271000 -5814532 - MIR SINE MIR -195 67 28 376 177 54 54 chr5 197271015 197271145 -5814387 + MER113 DNA MER1_type? 1 130 -391 1710 151 44 0 chr5 197271147 197271457 -5814075 + AluJb SINE Alu 1 322 0 267 224 132 92 chr5 197271685 197271837 -5813695 + MER104 DNA Tc2 11 168 -12 22 0 0 0 chr5 197271998 197272020 -5813512 + AT_rich Low_complexity Low_complexity 1 22 0 4195 92 4 2 chr5 197272044 197272597 -5812935 + MER41A LTR ERV1 1 554 0 252 0 0 0 chr5 197273660 197273688 -5811844 + (T)n Simple_repeat Simple_repeat 1 28 0 336 356 0 9 chr5 197273722 197273837 -5811695 - MIR SINE MIR -128 134 21 2139 105 13 10 chr5 197273916 197274220 -5811312 - AluSq SINE Alu -8 305 1 315 279 156 0 chr5 197274408 197274587 -5810945 + L1M4 LINE L1 4864 5070 -1076 369 0 0 0 chr5 197274684 197274725 -5810807 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 553 130 0 0 chr5 197274730 197274807 -5810725 - AluSg/x SINE Alu -37 275 199 1688 140 0 0 chr5 197274807 197275042 -5810490 - AluSx SINE Alu -77 235 1 1517 149 95 3 chr5 197275044 197275418 -5810114 + L1M4 LINE L1 5155 5558 -626 1126 273 120 25 chr5 197275621 197275727 -5809805 + L2 LINE L2 2232 2327 -987 315 0 0 0 chr5 197275727 197275762 -5809770 + (CA)n Simple_repeat Simple_repeat 1 35 0 1126 273 120 25 chr5 197275762 197276286 -5809246 + L2 LINE L2 2327 2922 -392 1753 152 15 0 chr5 197276337 197276600 -5808932 - AluJb SINE Alu -21 291 25 418 260 189 55 chr5 197276607 197277095 -5808437 + MLT1G1 LTR MaLR 43 595 0 293 109 146 0 chr5 197277987 197278042 -5807490 + Charlie8 DNA MER1_type 43 105 -2312 2035 127 10 0 chr5 197278048 197278339 -5807193 + AluSx SINE Alu 1 294 -18 1368 159 85 7 chr5 197278615 197278885 -5806647 + AluJb SINE Alu 15 305 -7 822 165 11 62 chr5 197278892 197279068 -5806464 + FRAM SINE Alu 1 40 0 373 258 167 0 chr5 197279122 197279242 -5806290 + MIR SINE MIR 111 250 -12 1967 128 31 7 chr5 197279882 197280170 -5805362 + AluSx SINE Alu 1 295 -17 30 0 0 0 chr5 197280289 197280319 -5805213 + AT_rich Low_complexity Low_complexity 1 30 0 446 239 37 0 chr5 197280484 197280593 -5804939 + MIR SINE MIR 81 193 -69 5859 235 84 50 chr5 197280698 197281912 -5803620 + L1MEc LINE L1 37 1208 -5007 2409 84 7 0 chr5 197281912 197282211 -5803321 + AluSg SINE Alu 1 301 -9 5859 235 84 50 chr5 197282211 197282706 -5802826 + L1MEc LINE L1 1208 1685 -4530 2142 116 7 10 chr5 197282706 197282999 -5802533 + AluSq SINE Alu 1 292 -21 5859 235 84 50 chr5 197282999 197283447 -5802085 + L1MEc LINE L1 1685 2116 -4099 2226 109 0 10 chr5 197283447 197283749 -5801783 + AluSx SINE Alu 1 299 -13 5859 235 84 50 chr5 197283749 197284016 -5801516 + L1MEc LINE L1 2116 2372 -3843 2674 133 43 7 chr5 197284016 197284461 -5801071 + MER65C LTR ERV1 1 461 0 5859 235 84 50 chr5 197284461 197284724 -5800808 + L1MEc LINE L1 2372 2790 -3425 1931 143 34 12 chr5 197284727 197285048 -5800484 - L1MC3 LINE L1 -770 7015 6688 594 111 22 0 chr5 197285055 197285145 -5800387 + L1M4 LINE L1 4857 4948 -1198 765 179 8 0 chr5 197285151 197285274 -5800258 + FLAM_C SINE Alu 2 125 -18 989 150 0 0 chr5 197285287 197285427 -5800105 - AluSq SINE Alu -49 264 125 849 154 26 137 chr5 197285509 197285618 -5799914 + L1MC3 LINE L1 6759 6830 -955 2423 96 0 0 chr5 197285618 197285920 -5799612 + AluSx SINE Alu 1 302 -10 849 154 26 137 chr5 197285920 197286044 -5799488 + L1MC3 LINE L1 6830 6966 -819 7916 90 7 53 chr5 197286044 197286096 -5799436 - HSMAR2 DNA Mariner -1 1301 1248 2212 125 3 0 chr5 197286096 197286407 -5799125 + AluSp SINE Alu 1 312 -1 7916 90 7 53 chr5 197286407 197286677 -5798855 - HSMAR2 DNA Mariner -54 1248 967 1764 135 66 0 chr5 197286677 197286936 -5798596 + AluSp SINE Alu 1 276 -37 7916 90 7 53 chr5 197286936 197287971 -5797561 - HSMAR2 DNA Mariner -335 967 6 669 181 27 27 chr5 197287976 197288125 -5797407 + L1MC3 LINE L1 6965 7113 -672 396 188 0 38 chr5 197288135 197288215 -5797317 + MLT1F1 LTR MaLR 49 125 -442 643 196 77 7 chr5 197288221 197288364 -5797168 + L1MD3 LINE L1 7407 7559 -436 444 290 52 38 chr5 197288364 197288630 -5796902 + MER34 LTR ERV1 5 263 -279 553 70 0 0 chr5 197288630 197288744 -5796788 - AluSc SINE Alu 0 321 208 2320 59 7 46 chr5 197289128 197289434 -5796098 - AluY SINE Alu -17 294 1 476 266 127 36 chr5 197290306 197290614 -5794918 - MLT1J LTR MaLR -20 491 156 2240 112 3 0 chr5 197291096 197291390 -5794142 - AluSq SINE Alu -18 295 1 1864 232 48 10 chr5 197291642 197292146 -5793386 + MER74A LTR ERVL 22 544 -14 1122 83 0 0 chr5 197292182 197292315 -5793217 - AluSq/x SINE Alu -179 133 1 3834 161 94 30 chr5 197292416 197293192 -5792340 + LTR1B LTR ERV1 1 826 0 228 227 15 0 chr5 197293193 197293259 -5792273 + L1ME LINE L1 5539 5605 -516 305 272 62 0 chr5 197293319 197293400 -5792132 + L1ME LINE L1 5694 5779 -342 234 327 6 19 chr5 197293827 197293983 -5791549 + L1M4c LINE L1 12 165 -6219 555 276 98 0 chr5 197294293 197294456 -5791076 - L1MEc LINE L1 -6178 218 40 1585 147 21 98 chr5 197294467 197294793 -5790739 - AluYb8 SINE Alu -17 301 1 1320 216 42 68 chr5 197294798 197295130 -5790402 + L1ME2 LINE L1 4850 5189 -957 2269 102 0 29 chr5 197295130 197295445 -5790087 + AluSq SINE Alu 1 306 -7 1320 216 42 68 chr5 197295445 197295505 -5790027 + L1ME2 LINE L1 5189 5249 -897 334 0 43 0 chr5 197295505 197295551 -5789981 + (TA)n Simple_repeat Simple_repeat 1 48 0 1320 216 42 68 chr5 197295551 197295656 -5789876 + L1ME2 LINE L1 5249 5335 -811 2365 107 0 10 chr5 197296116 197296426 -5789106 - AluSx SINE Alu -5 307 1 2136 116 0 0 chr5 197296633 197296910 -5788622 + AluSx SINE Alu 26 302 -10 437 276 29 0 chr5 197297590 197297695 -5787837 - L2 LINE L2 -804 2510 2403 2234 113 0 13 chr5 197297719 197298029 -5787503 + AluSc SINE Alu 4 309 0 373 187 44 11 chr5 197298037 197298128 -5787404 + L1MC1 LINE L1 6109 6202 -131 356 229 0 36 chr5 197298135 197298275 -5787257 + CT-rich Low_complexity Low_complexity 2 136 0 1142 195 176 4 chr5 197298281 197298537 -5786995 - AluJb SINE Alu -2 300 1 607 177 78 7 chr5 197298540 197298681 -5786851 + L1MC2 LINE L1 6192 6342 -2 186 333 0 28 chr5 197298681 197298753 -5786779 - L2 LINE L2 -921 2393 2324 826 245 66 15 chr5 197298785 197299058 -5786474 + L1MA9 LINE L1 5996 6282 -30 1068 158 12 0 chr5 197299211 197299375 -5786157 - AluSg/x SINE Alu -13 299 134 2214 106 0 44 chr5 197299375 197299696 -5785836 - AluSx SINE Alu -5 307 1 681 173 14 0 chr5 197299815 197299954 -5785578 + L1MD2 LINE L1 6219 6359 0 2176 136 0 0 chr5 197300391 197300692 -5784840 - AluSx SINE Alu -11 301 1 1597 152 3 109 chr5 197300721 197301051 -5784481 - AluJo SINE Alu -7 295 1 2241 108 0 0 chr5 197301703 197301998 -5783534 + AluY SINE Alu 1 295 -16 1298 199 43 0 chr5 197302962 197303239 -5782293 + L1ME2 LINE L1 5326 5614 -550 1346 201 28 84 chr5 197303239 197303431 -5782101 + MLT1A2 LTR MaLR 1 161 -213 4683 173 18 56 chr5 197303431 197304326 -5781206 + MER54A LTR ERVL 1 861 -40 2157 133 10 0 chr5 197304326 197304626 -5780906 + AluSx SINE Alu 1 303 -9 4683 173 18 56 chr5 197304626 197304666 -5780866 + MER54A LTR ERVL 861 901 0 1346 201 28 84 chr5 197304666 197304865 -5780667 + MLT1A2 LTR MaLR 161 370 -4 1038 271 45 6 chr5 197304881 197305217 -5780315 + L1ME2 LINE L1 5623 5971 -193 200 200 0 0 chr5 197305800 197305835 -5779697 + (CA)n Simple_repeat Simple_repeat 2 36 0 1650 129 0 120 chr5 197306099 197306456 -5779076 + AluSc SINE Alu 1 319 0 1247 219 11 4 chr5 197306456 197306721 -5778811 + L1M4b LINE L1 108 374 -6485 * 2694 231 39 41 chr5 197306720 197307135 -5778397 + L1M4b LINE L1 2799 3214 -3743 2027 118 3 7 chr5 197307135 197307459 -5778073 + AluSx SINE Alu 1 323 0 2694 231 39 41 chr5 197307459 197307644 -5777888 + L1M4b LINE L1 3214 3398 -3559 2264 97 0 16 chr5 197307644 197307955 -5777577 - AluY SINE Alu -5 306 1 2694 231 39 41 chr5 197307955 197308290 -5777242 + L1M4b LINE L1 3398 3697 -3260 635 181 111 152 chr5 197308297 197308612 -5776920 + MLT1A1 LTR MaLR 1 302 -63 2449 63 6 32 chr5 197308615 197308930 -5776602 - AluY SINE Alu -4 307 1 1566 250 62 4 chr5 197308934 197309364 -5776168 - L1P LINE L1 -3379 2767 2299 1780 164 48 3 chr5 197309364 197309656 -5775876 + AluJb SINE Alu 1 305 -7 1566 250 62 4 chr5 197309656 197309753 -5775779 - L1P LINE L1 -3847 2299 2209 4903 164 40 4 chr5 197309757 197310881 -5774651 + L1PB2 LINE L1 4996 6149 -2 1065 173 0 17 chr5 197311017 197311196 -5774336 + AluSg/x SINE Alu 127 302 -8 252 102 0 102 chr5 197311197 197311246 -5774286 - L1ME4a LINE L1 -102 6019 5976 2093 108 0 10 chr5 197311258 197311586 -5773946 - AluSp SINE Alu 0 325 1 1899 154 26 7 chr5 197311683 197312059 -5773473 + AluSx SINE Alu 1 382 0 184 336 109 59 chr5 197312080 197312199 -5773333 - MIR SINE MIR -109 153 29 1807 141 30 34 chr5 197312637 197312935 -5772597 - AluJo SINE Alu -15 297 1 357 229 25 38 chr5 197313329 197313486 -5772046 + G-rich Low_complexity Low_complexity 2 156 0 916 176 6 6 chr5 197315133 197315292 -5770240 + FRAM SINE Alu 1 159 -17 2150 128 0 0 chr5 197315294 197315606 -5769926 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 197315975 197315999 -5769533 + AT_rich Low_complexity Low_complexity 1 24 0 776 324 74 27 chr5 197316123 197316567 -5768965 + L1MDb LINE L1 101 565 -5844 334 255 97 77 chr5 197316619 197316815 -5768717 + L1MDb LINE L1 454 653 -5756 383 300 72 58 chr5 197316924 197317147 -5768385 + L1MDb LINE L1 406 631 -5778 363 238 58 85 chr5 197318387 197318954 -5766578 - HSREP522 Satellite telomeric -202 551 1 25961 66 5 1 chr5 197320232 197323731 -5761801 - L1P LINE L1 -2631 3515 2 1983 113 58 10 chr5 197323900 197324191 -5761341 - AluSc SINE Alu -4 305 1 1704 156 10 17 chr5 197325999 197326312 -5759220 + AluSx SINE Alu 1 311 0 235 316 13 0 chr5 197329959 197330038 -5755494 - L1ME LINE L1 -588 5574 5495 1218 141 0 0 chr5 197332231 197332408 -5753124 + AluSg/x SINE Alu 120 296 -16 1775 220 32 18 chr5 197332694 197333222 -5752310 - Tigger7 DNA MER2_type -1 2486 3 1006 125 0 21 chr5 197333443 197333587 -5751945 + AluSg SINE Alu 1 141 -169 2272 120 0 0 chr5 197333590 197333891 -5751641 + AluSg SINE Alu 1 301 -9 197 278 102 19 chr5 197333956 197334064 -5751468 - MIR3 SINE MIR -89 119 3 466 347 23 11 chr5 197334192 197334368 -5751164 + L3 LINE CR1 1321 1498 -79 196 327 0 0 chr5 197334453 197334508 -5751024 + L3 LINE CR1 1425 1479 -98 182 346 0 39 chr5 197334502 197334580 -5750952 + L2 LINE L2 3196 3270 -2 * 5740 211 38 31 chr5 197335282 197335832 -5749700 + L1 LINE L1 3530 4075 -2071 2320 81 0 24 chr5 197335832 197336130 -5749402 - AluY SINE Alu -20 291 1 5740 211 38 31 chr5 197336130 197337244 -5748288 + L1 LINE L1 4075 5205 -941 237 33 0 0 chr5 197538014 197538044 -5547488 + (A)n Simple_repeat Simple_repeat 1 30 0 228 190 138 0 chr5 197539472 197539530 -5546002 + L1MB4 LINE L1 6111 6176 -4 591 140 0 0 chr5 197540480 197540580 -5544952 - L1PA8 LINE L1 0 6172 6073 399 194 0 0 chr5 197540580 197540647 -5544885 + AluS SINE Alu 228 294 -8 1748 164 3 0 chr5 197543414 197543701 -5541831 + AluSp SINE Alu 1 288 -25 203 283 131 28 chr5 197545033 197545178 -5540354 - MIR SINE MIR -56 206 47 1788 149 3 0 chr5 197548436 197548725 -5536807 + AluSp SINE Alu 11 300 -13 1912 138 10 0 chr5 197549825 197550123 -5535409 + AluSp SINE Alu 3 303 -10 182 290 131 28 chr5 197550358 197550503 -5535029 - MIR SINE MIR -56 206 47 1967 130 10 0 chr5 197552371 197552679 -5532853 + AluSp SINE Alu 3 313 0 2292 97 0 3 chr5 197558808 197559118 -5526414 + AluSx SINE Alu 1 309 -3 1692 166 0 27 chr5 197559412 197559713 -5525819 + AluJo SINE Alu 1 293 -19 207 339 15 62 chr5 197560928 197561123 -5524409 - L2 LINE L2 -338 2976 2791 306 240 240 8 chr5 197561124 197561245 -5524287 - MER46C DNA MER2_type -188 150 2 324 282 0 45 chr5 197561278 197561369 -5524163 - L1ME LINE L1 -473 5648 5561 2331 77 0 0 chr5 197561369 197561667 -5523865 + AluY SINE Alu 1 298 -13 324 282 0 45 chr5 197561667 197561685 -5523847 - L1ME LINE L1 -560 5561 5544 200 163 23 0 chr5 197561759 197561802 -5523730 + CT-rich Low_complexity Low_complexity 2 45 0 238 233 47 12 chr5 197561835 197561921 -5523611 - L1ME LINE L1 -1197 4949 4861 1681 171 3 10 chr5 197562048 197562341 -5523191 + AluJb SINE Alu 1 291 -21 1216 254 101 85 chr5 197562949 197563823 -5521709 - L1MC4 LINE L1 -24 8018 7131 554 152 0 0 chr5 197564143 197564222 -5521310 + AluJ/FLAM SINE Alu 13 91 -221 444 37 0 0 chr5 197564224 197564278 -5521254 + (CA)n Simple_repeat Simple_repeat 2 55 0 917 185 0 0 chr5 197564282 197564444 -5521088 + AluJb SINE Alu 139 300 -12 2309 98 0 0 chr5 197564963 197565269 -5520263 + AluSc SINE Alu 1 306 -3 1236 191 131 15 chr5 197565282 197565549 -5519983 + AluJo SINE Alu 2 299 -3 1048 77 0 0 chr5 197565980 197566110 -5519422 + AluSg SINE Alu 1 130 -180 1524 199 33 3 chr5 197566258 197566560 -5518972 - MER2 DNA MER2_type 0 345 35 709 124 0 0 chr5 197567563 197567660 -5517872 + AluSc SINE Alu 2 98 -211 2245 76 0 52 chr5 197567711 197568039 -5517493 + AluY SINE Alu 1 311 0 1982 137 0 0 chr5 197568793 197569086 -5516446 - AluSx SINE Alu -19 293 1 628 230 86 8 chr5 197569086 197569302 -5516230 - L1 LINE L1 -750 5396 5174 230 248 87 54 chr5 197570173 197570322 -5515210 - HAL1b LINE L1 -884 464 311 1413 90 35 5 chr5 197570329 197570529 -5515003 + AluSq SINE Alu 1 206 -107 905 102 0 0 chr5 197570531 197570649 -5514883 - AluSq/x SINE Alu -194 118 1 22 0 0 0 chr5 197570662 197570684 -5514848 + AT_rich Low_complexity Low_complexity 1 22 0 1962 135 7 0 chr5 197570867 197571163 -5514369 + AluSx SINE Alu 1 298 -14 1820 131 37 3 chr5 197571315 197571613 -5513919 + AluSq SINE Alu 1 308 -5 2178 95 0 3 chr5 197571615 197571911 -5513621 + AluSg SINE Alu 1 295 -15 2232 97 0 0 chr5 197572126 197572434 -5513098 - AluSc SINE Alu -1 308 1 2190 98 0 3 chr5 197572648 197572953 -5512579 - AluSp SINE Alu -9 304 1 1443 97 0 19 chr5 197573397 197573603 -5511929 + AluSx SINE Alu 1 202 -110 1543 236 54 24 chr5 197573896 197574396 -5511136 - L1 LINE L1 -3328 2818 2304 3679 96 80 4 chr5 197574834 197575387 -5510145 + LTR61 LTR ERV1 1 595 0 234 237 5 98 chr5 197575564 197575758 -5509774 + (GGGTG)n Simple_repeat Simple_repeat 1 176 0 234 294 5 48 chr5 197576320 197576507 -5509025 + (GGGTG)n Simple_repeat Simple_repeat 1 179 0 * 285 294 6 44 chr5 197576368 197576528 -5509004 + (CGGGG)n Simple_repeat Simple_repeat 4 157 0 669 196 137 51 chr5 197576977 197577232 -5508300 - LOR1b LTR ERV1 -184 277 1 348 102 0 0 chr5 197579019 197579068 -5506464 + Alu SINE Alu 1 49 -254 2363 56 0 0 chr5 197579100 197579428 -5506104 - AluY SINE Alu 0 328 1 3276 103 0 0 chr5 197579434 197579879 -5505653 - L1PA13 LINE L1 -3 6160 5716 247 219 0 0 chr5 197580406 197580447 -5505085 + AluJ/monomer SINE Alu 1 41 -259 * 596 130 0 20 chr5 197580435 197580535 -5504997 + LTR15 LTR ERV1 390 487 -6 1291 64 6 12 chr5 197580637 197580810 -5504722 + L1PA13 LINE L1 5987 6158 -5 2287 56 0 0 chr5 197580818 197581131 -5504401 - AluY SINE Alu 0 313 1 5168 136 44 32 chr5 197582490 197583450 -5502082 - L1MA8 LINE L1 -1 6290 5310 2111 108 3 0 chr5 197583450 197583755 -5501777 - AluSc SINE Alu -3 306 1 5168 136 44 32 chr5 197583755 197584008 -5501524 - L1MA8 LINE L1 -981 5310 5062 1193 132 73 18 chr5 197584008 197584228 -5501304 + AluJb SINE Alu 64 295 -17 1352 177 107 3 chr5 197584228 197584528 -5501004 - L1MA8 LINE L1 -1924 4222 3892 2041 153 124 3 chr5 197584534 197584913 -5500619 + MSTA LTR MaLR 3 427 -1 5232 213 76 4 chr5 197584915 197585984 -5499548 + MSTA-int LTR MaLR 2 1147 -504 1035 189 66 0 chr5 197585985 197586181 -5499351 - MER41C LTR ERV1 0 554 346 1175 198 5 18 chr5 197586181 197586398 -5499134 - MER41C LTR ERV1 -340 214 1 5931 153 40 0 chr5 197586398 197587358 -5498174 - MER41C-int LTR ERV1 0 7756 6759 180 284 40 27 chr5 197588215 197588289 -5497243 - L2 LINE L2 0 3272 3198 27 0 0 0 chr5 197590593 197590620 -5494912 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 197591492 197591520 -5494012 + AT_rich Low_complexity Low_complexity 1 28 0 1280 227 27 27 chr5 197591657 197591952 -5493580 + MER2 DNA MER2_type 48 342 -3 3803 27 0 2 chr5 197592765 197593206 -5492326 - L1PA4 LINE L1 -3 6152 5713 2221 88 10 0 chr5 197593582 197593887 -5491645 + AluSq SINE Alu 1 308 -5 2405 62 0 0 chr5 197593957 197594266 -5491266 - AluY SINE Alu -2 309 1 343 179 0 0 chr5 197594311 197594378 -5491154 - AluJo SINE Alu -30 272 206 457 152 238 29 chr5 197594378 197594483 -5491049 - AluJo SINE Alu -161 151 25 1142 255 46 39 chr5 197600413 197600768 -5484764 - MER21B LTR ERV1 -74 531 131 267 264 40 72 chr5 197600779 197600904 -5484628 - MER77 LTR ERV1 -405 200 80 1235 233 71 58 chr5 197603084 197603535 -5481997 + MLT1C LTR MaLR 11 467 0 1657 223 0 0 chr5 197603767 197604095 -5481437 + L1MCa LINE L1 6 333 -6093 1063 32 0 0 chr5 197604095 197604218 -5481314 + AluY SINE Alu 1 123 -188 279 0 0 0 chr5 197604220 197604251 -5481281 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2702 191 50 0 chr5 197604251 197604753 -5480779 + L1MCa LINE L1 327 853 -5573 910 187 47 5 chr5 197604773 197604987 -5480545 + L1MCa LINE L1 2105 2327 -4099 1190 268 106 57 chr5 197605119 197605630 -5479902 + L1MB4 LINE L1 5 540 -5844 * 2386 241 51 27 chr5 197605623 197606389 -5479143 + L1MB4 LINE L1 3995 4778 -1604 3405 193 25 10 chr5 197606412 197607278 -5478254 + L1MB4 LINE L1 5323 6204 -212 1548 183 42 0 chr5 197607678 197607967 -5477565 - AluJo SINE Alu -11 301 1 500 233 33 0 chr5 197608478 197608598 -5476934 - FLAM_A SINE Alu -3 139 16 279 93 0 0 chr5 197608598 197608641 -5476891 + (TG)n Simple_repeat Simple_repeat 2 44 0 598 162 105 0 chr5 197608641 197608746 -5476786 - FLAM_C SINE Alu -26 117 2 1384 271 86 60 chr5 197610882 197611744 -5473788 + L1MC4 LINE L1 7136 8019 -23 2132 127 0 0 chr5 197612302 197612601 -5472931 + AluSx SINE Alu 1 299 -13 305 159 0 29 chr5 197612704 197612773 -5472759 + GA-rich Low_complexity Low_complexity 4 70 0 321 335 40 0 chr5 197612824 197612976 -5472556 + L1ME LINE L1 5513 5670 -451 337 206 0 0 chr5 197613042 197613105 -5472427 + MER46C DNA MER2_type 87 149 -189 255 346 38 27 chr5 197613116 197613301 -5472231 + L2 LINE L2 2791 2977 -337 1796 125 0 67 chr5 197614528 197614841 -5470691 - AluJb SINE Alu -20 292 1 2280 73 0 7 chr5 197614914 197615216 -5470316 - AluY SINE Alu -11 300 1 2388 173 26 94 chr5 197615244 197615843 -5469689 + LTR6A LTR ERV1 1 499 -65 2589 39 3 0 chr5 197615843 197616151 -5469381 - AluY SINE Alu -2 309 1 2388 173 26 94 chr5 197616151 197616213 -5469319 + LTR6A LTR ERV1 499 564 0 1429 176 17 10 chr5 197620131 197620420 -5465112 - AluJb SINE Alu -21 291 1 868 224 59 12 chr5 197622157 197622411 -5463121 - AluSg SINE Alu -44 266 1 235 273 180 31 chr5 197622765 197622926 -5462606 + MIR SINE MIR 25 209 -53 1783 154 3 0 chr5 197624574 197624860 -5460672 - AluJb SINE Alu -12 300 14 444 242 102 38 chr5 197626996 197627182 -5458350 - LOR1-int LTR ERV1 -2868 3730 3533 591 188 23 51 chr5 197627275 197627549 -5457983 - LOR1-int LTR ERV1 -3810 4310 2290 307 327 65 50 chr5 197627668 197627867 -5457665 - L1M4 LINE L1 -2368 3778 3577 407 253 68 76 chr5 197628191 197628440 -5457092 - HSATI Satellite Satellite -322 255 9 2183 108 0 3 chr5 197628644 197628949 -5456583 - AluSx SINE Alu -8 304 1 320 254 107 66 chr5 197629583 197629780 -5455752 + L1MCa LINE L1 1892 2096 -4330 955 308 96 8 chr5 197630254 197630767 -5454765 - MLT1G LTR MaLR -32 558 1 372 150 62 0 chr5 197631071 197631151 -5454381 - L1PA16 LINE L1 -2 6164 6080 4249 160 52 8 chr5 197631191 197631947 -5453585 - MER49 LTR ERV1 -39 884 96 194 231 0 0 chr5 197632607 197632646 -5452886 - MIR SINE MIR -135 73 35 338 312 28 78 chr5 197632866 197633083 -5452449 + L1MB5 LINE L1 5271 5476 -859 1575 231 152 26 chr5 197633090 197633600 -5451932 + L1MB5 LINE L1 5560 6143 -31 2401 49 0 26 chr5 197633600 197633906 -5451626 + AluY SINE Alu 1 298 -13 1575 231 152 26 chr5 197633906 197633936 -5451596 + L1MB5 LINE L1 6143 6168 -6 271 287 17 29 chr5 197634808 197634982 -5450550 + C-rich Low_complexity Low_complexity 2 173 0 342 155 24 12 chr5 197637812 197637896 -5447636 + G-rich Low_complexity Low_complexity 4 88 0 1123 204 109 0 chr5 197638383 197638668 -5446864 - LOR1a LTR ERV1 -180 317 2 199 153 0 14 chr5 197640120 197640161 -5445371 + MIR SINE MIR 100 140 -68 3612 124 46 19 chr5 197640185 197640750 -5444782 - LTR19B LTR ERV1 0 580 1 789 11 0 0 chr5 197641187 197641275 -5444257 - L1PA7 LINE L1 -581 5591 5504 4423 50 14 12 chr5 197641275 197641836 -5443696 + L1PA7 LINE L1 5588 6154 0 205 265 5 74 chr5 197642481 197642670 -5442862 + (CGGGG)n Simple_repeat Simple_repeat 4 179 0 939 217 97 47 chr5 197643101 197643401 -5442131 - LOR1a LTR ERV1 -182 315 1 996 94 0 0 chr5 197644156 197644283 -5441249 - AluSq/x SINE Alu -186 127 1 22 0 0 0 chr5 197644301 197644323 -5441209 + AT_rich Low_complexity Low_complexity 1 22 0 1921 125 34 0 chr5 197644509 197644805 -5440727 + AluSx SINE Alu 1 306 -6 1876 136 0 3 chr5 197644959 197645254 -5440278 + AluSq SINE Alu 1 294 -19 2141 100 0 7 chr5 197645462 197645763 -5439769 - AluSc SINE Alu -10 299 1 2034 117 0 3 chr5 197645977 197646275 -5439257 - AluSp SINE Alu -13 300 4 230 113 0 18 chr5 197646718 197646965 -5438567 + AluSx SINE Alu 1 298 -3 1736 248 59 19 chr5 197647114 197647754 -5437778 - L1 LINE L1 -3169 2977 2312 2349 74 0 10 chr5 197648133 197648445 -5437087 + AluY SINE Alu 1 309 -2 1133 200 80 40 chr5 197648453 197648685 -5436847 - L1M4 LINE L1 -1430 4716 4466 2307 91 3 0 chr5 197648685 197648993 -5436539 + AluSg SINE Alu 1 309 -1 1133 200 80 40 chr5 197648993 197649085 -5436447 - L1M4 LINE L1 -1680 4466 4379 2108 151 23 60 chr5 197649085 197649318 -5436214 - MSTA LTR MaLR 0 428 188 2035 136 0 0 chr5 197649318 197649612 -5435920 - AluSx SINE Alu -18 294 1 1913 128 20 3 chr5 197649619 197649917 -5435615 - AluSx SINE Alu -9 303 1 2108 151 23 60 chr5 197649917 197650060 -5435472 - MSTA LTR MaLR -246 182 58 258 135 19 0 chr5 197650060 197650112 -5435420 - MSTA LTR MaLR -318 110 58 271 135 19 0 chr5 197650112 197650164 -5435368 - MSTA LTR MaLR -318 110 58 275 115 19 0 chr5 197650164 197650216 -5435316 - MSTA LTR MaLR -318 110 58 228 154 19 0 chr5 197650216 197650268 -5435264 - MSTA LTR MaLR -318 110 58 284 115 19 0 chr5 197650268 197650320 -5435212 - MSTA LTR MaLR -318 110 58 253 154 19 0 chr5 197650320 197650372 -5435160 - MSTA LTR MaLR -318 110 58 273 125 62 0 chr5 197650460 197650524 -5435008 - MSTA LTR MaLR -303 125 58 296 96 19 0 chr5 197650524 197650576 -5434956 - MSTA LTR MaLR -318 110 58 395 167 14 0 chr5 197650576 197650648 -5434884 - MSTA LTR MaLR -318 110 38 9809 141 37 24 chr5 197650650 197652264 -5433268 - MSTA-int LTR MaLR -16 1635 1 2394 139 39 49 chr5 197652264 197652321 -5433211 - MSTA LTR MaLR 0 428 372 1905 138 6 16 chr5 197652321 197652633 -5432899 - AluSx SINE Alu -2 310 2 2394 139 39 49 chr5 197652633 197653007 -5432525 - MSTA LTR MaLR -56 372 1 5082 208 39 42 chr5 197653007 197653104 -5432428 - L1M4 LINE L1 -1765 4381 4285 1999 128 3 0 chr5 197653104 197653394 -5432138 - AluSx SINE Alu -21 291 1 5082 208 39 42 chr5 197653394 197654696 -5430836 - L1M4 LINE L1 -1861 4285 2987 386 147 73 176 chr5 197654730 197654787 -5430745 + Charlie2 DNA MER1_type 2636 2697 -165 733 186 0 8 chr5 197654787 197654911 -5430621 + FLAM_A SINE Alu 1 123 -10 386 147 73 176 chr5 197654911 197654938 -5430594 + Charlie2 DNA MER1_type 2697 2725 -137 1973 122 7 0 chr5 197654938 197655233 -5430299 + AluJb SINE Alu 8 304 -8 386 147 73 176 chr5 197655233 197655392 -5430140 + Charlie2 DNA MER1_type 2725 2855 -7 2984 185 39 53 chr5 197656540 197657055 -5428477 + L1ME LINE L1 4254 4774 -1372 1002 179 12 0 chr5 197657055 197657217 -5428315 + FRAM SINE Alu 1 164 -2 2984 185 39 53 chr5 197657217 197657440 -5428092 + L1ME LINE L1 4774 4998 -1148 5637 104 40 21 chr5 197657440 197658345 -5427187 + SVA Other Other 456 1377 -9 2984 185 39 53 chr5 197658345 197658391 -5427141 + L1ME LINE L1 4998 5030 -1116 2043 129 0 0 chr5 197658391 197658685 -5426847 + AluSg SINE Alu 1 294 -16 2984 185 39 53 chr5 197658685 197658735 -5426797 + L1ME LINE L1 5030 5079 -1067 3220 110 5 0 chr5 197658735 197659181 -5426351 + MER83 LTR ERV1 1 448 0 18720 149 25 14 chr5 197659181 197661129 -5424403 + MER83-int LTR ERV1 12 2007 -2278 2014 113 14 0 chr5 197661129 197661421 -5424111 - AluSx SINE Alu -16 296 1 18720 149 25 14 chr5 197661421 197662456 -5423076 + MER83-int LTR ERV1 2007 3029 -1256 2605 120 15 15 chr5 197662450 197662841 -5422691 + MER83-int LTR ERV1 3877 4267 -18 * 3140 116 18 0 chr5 197662849 197663289 -5422243 + MER83 LTR ERV1 1 448 0 1174 202 31 9 chr5 197663319 197663669 -5421863 + L1ME LINE L1 5120 5480 -686 864 175 18 29 chr5 197663686 197663857 -5421675 + MER58A DNA MER1_type 43 211 -13 2837 97 5 0 chr5 197663911 197664293 -5421239 - pTR5 LTR ERV1 -2046 392 9 276 267 59 20 chr5 197664393 197664494 -5421038 + L1MC4a LINE L1 2706 2810 -3336 1884 247 81 39 chr5 197664550 197665253 -5420279 + L1MC4a LINE L1 2948 3751 -2395 1509 189 0 17 chr5 197665253 197665550 -5419982 - AluJo SINE Alu -18 294 3 1884 247 81 39 chr5 197665550 197665904 -5419628 + L1MC4a LINE L1 3751 4089 -2057 * 4128 164 55 3 chr5 197665901 197666579 -5418953 + L1M1 LINE L1 15 727 -6838 1293 107 0 0 chr5 197666593 197666770 -5418762 + AluSq SINE Alu 21 197 -116 19270 45 11 2 chr5 197666870 197669274 -5416258 + L1P LINE L1 1383 3809 -2337 646 281 84 70 chr5 197669376 197669644 -5415888 + L1MC4a LINE L1 5364 5627 -2181 2257 83 0 10 chr5 197669644 197669945 -5415587 + AluY SINE Alu 1 298 -13 646 281 84 70 chr5 197669945 197670234 -5415298 + L1MC4a LINE L1 5627 5929 -1879 1727 89 0 45 chr5 197671195 197671464 -5414068 + AluSg SINE Alu 1 257 -53 1056 123 95 20 chr5 197671594 197671847 -5413685 + L1MA2 LINE L1 6027 6298 -6 1962 107 24 27 chr5 197671848 197672146 -5413386 - AluSq SINE Alu -16 297 1 530 269 106 67 chr5 197672288 197672798 -5412734 - MER90 LTR ERV1 -2 612 83 287 304 83 17 chr5 197672821 197673002 -5412530 + L1MC4a LINE L1 5385 5580 -590 * 508 211 229 56 chr5 197672988 197673254 -5412278 - L1MC5 LINE L1 -36 7925 7614 917 154 6 0 chr5 197673254 197673410 -5412122 - FRAM SINE Alu -19 157 1 374 193 70 35 chr5 197673413 197673527 -5412005 - L1MC5 LINE L1 -339 7622 7505 329 269 196 20 chr5 197673514 197673815 -5411717 + L1MC4a LINE L1 5555 5908 -1900 * 2307 67 3 0 chr5 197674829 197675127 -5410405 + AluY SINE Alu 1 299 -12 219 125 0 42 chr5 197675449 197675497 -5410035 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 419 265 98 23 chr5 197677039 197677096 -5408436 + MIR SINE MIR 34 85 -177 2158 103 0 3 chr5 197677096 197677396 -5408136 - AluSg SINE Alu -10 300 2 419 265 98 23 chr5 197677396 197677470 -5408062 + MIR SINE MIR 85 175 -87 1123 126 0 0 chr5 197677526 197677685 -5407847 + AluSg/x SINE Alu 133 291 -19 288 0 0 0 chr5 197678607 197678639 -5406893 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1829 108 0 75 chr5 197678641 197678946 -5406586 - AluSx SINE Alu -28 284 3 606 218 30 12 chr5 197679195 197679360 -5406172 - L1M4 LINE L1 -1746 4400 4233 28 29 0 0 chr5 197679408 197679443 -5406089 + AT_rich Low_complexity Low_complexity 1 35 0 12877 41 15 1 chr5 197679443 197681755 -5403777 - L1PA5 LINE L1 -17 6137 3805 230 248 87 54 chr5 197681995 197682144 -5403388 - HAL1b LINE L1 -884 464 311 1334 99 35 10 chr5 197682151 197682352 -5403180 + AluSq SINE Alu 1 206 -107 905 102 0 0 chr5 197682354 197682472 -5403060 - AluSq/x SINE Alu -195 118 1 22 0 0 0 chr5 197682485 197682507 -5403025 + AT_rich Low_complexity Low_complexity 1 22 0 1970 135 7 0 chr5 197682690 197682987 -5402545 + AluSx SINE Alu 1 299 -13 1828 130 37 3 chr5 197683139 197683438 -5402094 + AluSq SINE Alu 1 309 -4 2257 89 0 3 chr5 197683441 197683743 -5401789 + AluSg SINE Alu 1 301 -9 2233 93 0 6 chr5 197683977 197684288 -5401244 - AluSc SINE Alu 0 309 1 2240 88 0 3 chr5 197684502 197684807 -5400725 - AluSp SINE Alu -9 304 1 1519 89 0 5 chr5 197685240 197685442 -5400090 + AluSx SINE Alu 1 201 -111 240 118 0 0 chr5 197685443 197685477 -5400055 + AluSx SINE Alu 257 290 -10 1492 234 131 16 chr5 197685649 197686222 -5399310 - L1M4 LINE L1 -3196 2950 2312 2257 84 0 13 chr5 197686602 197686913 -5398619 + AluY SINE Alu 1 307 -4 666 124 37 112 chr5 197687042 197687189 -5398343 - L1M4 LINE L1 -1544 4602 4478 2489 84 3 0 chr5 197687189 197687498 -5398034 + AluSg SINE Alu 1 310 0 666 124 37 112 chr5 197687498 197687592 -5397940 - L1M4 LINE L1 -1668 4478 4379 2151 140 23 60 chr5 197687592 197687825 -5397707 - MSTA LTR MaLR 0 428 188 2144 139 0 0 chr5 197687825 197688119 -5397413 - AluSx SINE Alu -18 294 1 1871 137 20 7 chr5 197688126 197688418 -5397114 - AluSx SINE Alu -16 296 1 2151 140 23 60 chr5 197688418 197688561 -5396971 - MSTA LTR MaLR -246 182 58 279 115 19 0 chr5 197688561 197688613 -5396919 - MSTA LTR MaLR -318 110 58 250 135 19 0 chr5 197688613 197688665 -5396867 - MSTA LTR MaLR -318 110 58 250 135 19 0 chr5 197688665 197688717 -5396815 - MSTA LTR MaLR -318 110 58 250 135 19 0 chr5 197688717 197688769 -5396763 - MSTA LTR MaLR -318 110 58 246 135 19 0 chr5 197688769 197688821 -5396711 - MSTA LTR MaLR -318 110 58 279 115 19 0 chr5 197688821 197688873 -5396659 - MSTA LTR MaLR -318 110 58 279 115 19 0 chr5 197688873 197688925 -5396607 - MSTA LTR MaLR -318 110 58 279 115 19 0 chr5 197688925 197688977 -5396555 - MSTA LTR MaLR -318 110 58 250 135 19 0 chr5 197688977 197689029 -5396503 - MSTA LTR MaLR -318 110 58 252 135 19 0 chr5 197689029 197689081 -5396451 - MSTA LTR MaLR -318 110 58 250 135 19 0 chr5 197689081 197689133 -5396399 - MSTA LTR MaLR -318 110 58 415 153 14 0 chr5 197689185 197689257 -5396275 - MSTA LTR MaLR -318 110 38 9560 144 36 30 chr5 197689259 197690621 -5394911 - MSTA-int LTR MaLR -16 1635 260 2587 37 0 3 chr5 197690621 197690916 -5394616 + AluY SINE Alu 1 294 -17 9560 144 36 30 chr5 197690916 197691178 -5394354 - MSTA-int LTR MaLR -1391 260 1 2225 135 38 93 chr5 197691178 197691256 -5394276 - MSTA LTR MaLR 0 428 347 1844 156 10 3 chr5 197691256 197691544 -5393988 - AluSx SINE Alu -21 291 2 2225 135 38 93 chr5 197691544 197691918 -5393614 - MSTA LTR MaLR -81 347 1 5242 207 29 52 chr5 197691918 197692015 -5393517 - L1M4 LINE L1 -1765 4381 4283 2196 110 3 0 chr5 197692015 197692305 -5393227 - AluSx SINE Alu -21 291 1 5242 207 29 52 chr5 197692305 197693635 -5391897 - L1M4 LINE L1 -1863 4283 2987 395 151 76 151 chr5 197693669 197693726 -5391806 + Charlie2 DNA MER1_type 2636 2696 -166 781 179 0 0 chr5 197693726 197693849 -5391683 + FLAM_A SINE Alu 1 123 -10 395 151 76 151 chr5 197693849 197693869 -5391663 + Charlie2 DNA MER1_type 2696 2716 -146 2086 133 7 0 chr5 197693869 197694171 -5391361 + AluJb SINE Alu 1 304 -8 395 151 76 151 chr5 197694171 197694330 -5391202 + Charlie2 DNA MER1_type 2716 2855 -7 2978 193 37 29 chr5 197695481 197695994 -5389538 + L1MB8 LINE L1 4254 4776 -1370 995 179 12 0 chr5 197695994 197696156 -5389376 + FRAM SINE Alu 1 164 -2 2978 193 37 29 chr5 197696156 197696378 -5389154 + L1MB8 LINE L1 4776 4995 -1151 6150 98 32 50 chr5 197696379 197697557 -5387975 + SVA Other Other 432 1377 -9 2136 136 0 0 chr5 197697603 197697897 -5387635 + AluSg SINE Alu 1 294 -16 3232 108 5 0 chr5 197697947 197698393 -5387139 + MER83 LTR ERV1 1 448 0 2499 168 49 7 chr5 197698393 197698803 -5386729 + MER83-int LTR ERV1 12 438 -4442 16086 141 16 16 chr5 197698829 197700308 -5385224 + MER83-int LTR ERV1 512 1991 -2294 2212 115 0 0 chr5 197700308 197700604 -5384928 - AluSx SINE Alu -16 296 1 16086 141 16 16 chr5 197700604 197701643 -5383889 + MER83-int LTR ERV1 1991 3029 -1256 2553 125 15 15 chr5 197701637 197702028 -5383504 + MER83-int LTR ERV1 3877 4267 -18 * 3071 129 11 0 chr5 197702036 197702479 -5383053 + MER83 LTR ERV1 1 448 0 1143 209 54 7 chr5 197702509 197702858 -5382674 + L1MB8 LINE L1 5120 5480 -686 954 162 6 29 chr5 197702875 197703048 -5382484 + MER58A DNA MER1_type 43 211 -13 7107 113 134 116 chr5 197703105 197704774 -5380758 - pTR5 LTR ERV1 0 2438 741 2570 202 35 23 chr5 197704781 197705024 -5380508 + L1MB8 LINE L1 5569 5808 -370 2396 80 3 7 chr5 197705024 197705326 -5380206 + AluY SINE Alu 1 301 -10 2570 202 35 23 chr5 197705326 197705685 -5379847 + L1MB8 LINE L1 5808 6178 0 247 389 8 16 chr5 197706093 197706219 -5379313 - L2 LINE L2 -14 3258 3134 624 304 146 52 chr5 197706406 197707309 -5378223 - L2 LINE L2 -375 2939 1952 746 191 127 50 chr5 197707340 197707418 -5378114 - MLT1F1 LTR MaLR 0 567 496 1168 192 82 80 chr5 197707418 197707782 -5377750 + MLT1A1 LTR MaLR 1 365 0 746 191 127 50 chr5 197707782 197707923 -5377609 - MLT1F1 LTR MaLR -71 496 331 * 1072 230 9 4 chr5 197707914 197708140 -5377392 - MLT1F1 LTR MaLR -340 227 1 267 336 40 7 chr5 197708140 197708289 -5377243 - L2 LINE L2 -1407 1907 1754 2126 89 0 49 chr5 197709795 197710099 -5375433 + AluSg SINE Alu 1 289 -21 3592 176 16 51 chr5 197710328 197711119 -5374413 - L1MB4 LINE L1 -2 6178 5415 350 321 8 46 chr5 197711205 197711336 -5374196 + L2 LINE L2 3146 3271 -1 462 312 154 40 chr5 197711719 197712264 -5373268 - L2 LINE L2 -724 2590 1984 1894 141 3 7 chr5 197712287 197712577 -5372955 - AluJo SINE Alu -8 304 16 806 151 0 137 chr5 197712706 197712833 -5372699 + MER5A DNA MER1_type 1 144 -45 2630 103 70 0 chr5 197712833 197713231 -5372301 - MSTA LTR MaLR -2 426 1 806 151 0 137 chr5 197713231 197713259 -5372273 + MER5A DNA MER1_type 144 121 -68 2302 82 34 0 chr5 197713259 197713551 -5371981 - AluSx SINE Alu -10 302 1 806 151 0 137 chr5 197713551 197713613 -5371919 + MER5A DNA MER1_type 120 189 0 662 97 177 32 chr5 197714004 197714128 -5371404 - MER30 DNA MER1_type -88 142 1 583 261 38 0 chr5 197714158 197714306 -5371226 + L1MC/D LINE L1 5526 5681 -489 215 73 18 91 chr5 197714656 197714711 -5370821 + (CGGGG)n Simple_repeat Simple_repeat 3 53 0 249 83 0 0 chr5 197714725 197714761 -5370771 + (CCG)n Simple_repeat Simple_repeat 2 37 0 31 44 0 0 chr5 197714876 197714921 -5370611 + GC_rich Low_complexity Low_complexity 1 45 0 309 244 39 0 chr5 197715645 197715723 -5369809 - L2 LINE L2 -17 3296 3216 210 150 0 0 chr5 197716228 197716268 -5369264 + L2 LINE L2 3273 3312 -1 196 281 143 29 chr5 197716343 197716553 -5368979 - L2 LINE L2 -927 2387 2154 28 0 0 0 chr5 197717324 197717352 -5368180 + AT_rich Low_complexity Low_complexity 1 28 0 430 176 2 0 chr5 197717584 197717666 -5367866 - L1ME4a LINE L1 -46 6052 1232 1285 147 112 4 chr5 197717899 197718131 -5367401 - Tigger2 DNA MER2_type -11 2707 2451 3649 148 27 80 chr5 197718162 197718984 -5366548 - Tigger2 DNA MER2_type -1940 778 1 579 216 81 38 chr5 197719090 197719275 -5366257 - L2 LINE L2 -6 3307 3115 23 0 0 0 chr5 197719331 197719354 -5366178 + AT_rich Low_complexity Low_complexity 1 23 0 981 277 168 30 chr5 197719355 197719855 -5365677 - L2 LINE L2 0 3313 2883 2102 97 10 27 chr5 197719855 197720153 -5365379 - AluSc SINE Alu -16 293 1 981 277 168 30 chr5 197720153 197720210 -5365322 - L2 LINE L2 -430 2883 2835 484 248 23 15 chr5 197720210 197720343 -5365189 + MER94 DNA DNA 1 134 0 981 277 168 30 chr5 197720343 197720512 -5365020 - L2 LINE L2 -478 2835 2489 2425 103 3 0 chr5 197720702 197721014 -5364518 - AluSq SINE Alu 0 313 1 2015 218 58 11 chr5 197721058 197721504 -5364028 + MLT1C LTR MaLR 1 467 0 2394 121 106 7 chr5 197721634 197722006 -5363526 - MER65A LTR ERV1 0 445 28 2376 84 3 7 chr5 197722006 197722303 -5363229 - AluSg SINE Alu -14 296 1 2394 121 106 7 chr5 197722303 197722335 -5363197 - MER65A LTR ERV1 -417 28 1 378 0 0 0 chr5 197722401 197722443 -5363089 + (TG)n Simple_repeat Simple_repeat 2 43 0 993 133 76 0 chr5 197722445 197722603 -5362929 - AluSx SINE Alu -14 296 127 7412 43 9 0 chr5 197722605 197723778 -5361754 - L1PA7 LINE L1 -1 6153 4974 14925 87 8 14 chr5 197723878 197724460 -5361072 - L1PA7 LINE L1 -2370 3776 3191 2395 90 0 13 chr5 197724460 197724761 -5360771 + AluY SINE Alu 1 297 -14 14925 87 8 14 chr5 197724761 197725926 -5359606 - L1PA7 LINE L1 -2955 3191 2044 2185 115 0 13 chr5 197725926 197726230 -5359302 + AluSc SINE Alu 1 300 -9 14925 87 8 14 chr5 197726230 197726616 -5358916 - L1PA7 LINE L1 -4102 2044 1657 930 137 0 0 chr5 197726636 197726767 -5358765 - AluSx SINE Alu -179 133 3 4819 219 63 21 chr5 197726771 197727910 -5357622 - MER65A-int LTR ERV1 -56 4815 3629 1367 153 47 53 chr5 197727928 197728248 -5357284 - MER4-int LTR ERV1 -1113 3823 3506 1450 102 5 0 chr5 197728249 197728435 -5357097 + AluSq SINE Alu 1 187 -126 556 118 0 0 chr5 197728435 197728511 -5357021 + AluY SINE Alu 219 294 -17 1988 124 4 4 chr5 197728554 197728829 -5356703 + AluSx SINE Alu 1 275 -37 21 0 0 0 chr5 197728832 197728853 -5356679 + AT_rich Low_complexity Low_complexity 1 21 0 219 139 0 0 chr5 197728974 197729010 -5356522 + (A)n Simple_repeat Simple_repeat 1 36 0 610 203 40 113 chr5 197729424 197729780 -5355752 - MER4-int LTR ERV1 -2513 3482 2478 1581 160 27 50 chr5 197730010 197730310 -5355222 - AluJo SINE Alu -19 293 1 274 163 0 0 chr5 197730458 197730501 -5355031 - MSTA LTR MaLR 0 428 386 249 136 0 21 chr5 197730501 197730564 -5354968 + L1P LINE L1 4958 5019 -1127 1735 163 112 6 chr5 197730585 197730933 -5354599 - MSTA LTR MaLR -27 401 14 1039 153 26 42 chr5 197731054 197731244 -5354288 - MER20 DNA MER1_type -31 188 2 579 204 18 0 chr5 197731488 197731601 -5353931 - MIR SINE MIR -32 230 116 443 129 0 0 chr5 197731847 197731909 -5353623 - AluJ/FRAM SINE Alu -19 293 232 509 142 11 16 chr5 197732222 197732346 -5353186 - L1MB7 LINE L1 -1 6183 6021 1744 137 65 4 chr5 197732438 197732715 -5352817 + AluSx SINE Alu 1 294 -18 2245 108 0 0 chr5 197732744 197733031 -5352501 + AluSx SINE Alu 1 287 -25 59 30 0 30 chr5 197733203 197733302 -5352230 + AT_rich Low_complexity Low_complexity 1 96 0 235 375 0 0 chr5 197733342 197733422 -5352110 + L2 LINE L2 3222 3301 -12 1765 108 39 0 chr5 197733463 197733721 -5351811 + L1PB1 LINE L1 5884 6151 0 24 0 0 0 chr5 197733721 197733745 -5351787 + AT_rich Low_complexity Low_complexity 1 24 0 320 274 261 13 chr5 197734093 197734246 -5351286 + LTR67 LTR ERVL 103 293 -264 2313 122 0 0 chr5 197734249 197734561 -5350971 - AluSx SINE Alu 0 312 1 231 271 21 0 chr5 197734571 197734667 -5350865 - L1M4 LINE L1 -1488 4658 4561 22 35 0 0 chr5 197734676 197734705 -5350827 + AT_rich Low_complexity Low_complexity 1 29 0 2220 117 0 16 chr5 197734715 197735024 -5350508 + AluSx SINE Alu 1 304 -8 4621 226 30 41 chr5 197735032 197735773 -5349759 + L1M4 LINE L1 3444 4167 -1979 2034 153 0 0 chr5 197735773 197736068 -5349464 + AluSx SINE Alu 1 295 -17 4621 226 30 41 chr5 197736068 197736576 -5348956 + L1M4 LINE L1 4167 4679 -1467 1962 175 107 3 chr5 197736576 197736958 -5348574 - MSTB LTR MaLR 0 426 5 5110 202 148 3 chr5 197736960 197738041 -5347491 - MSTB-int LTR MaLR 0 1651 414 362 320 10 0 chr5 197738037 197738137 -5347395 + L1M4 LINE L1 4064 4164 -1982 * 872 159 0 0 chr5 197738137 197738269 -5347263 + FLAM_C SINE Alu 1 132 -11 458 203 5 128 chr5 197738270 197738457 -5347075 + L1M4 LINE L1 4151 4314 -1832 270 0 0 0 chr5 197738517 197738547 -5346985 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 28 48 0 0 chr5 197739065 197739107 -5346425 + AT_rich Low_complexity Low_complexity 1 42 0 4339 254 108 59 chr5 197739373 197740988 -5344544 + L1ME LINE L1 124 1658 -4422 1684 153 23 39 chr5 197740988 197741296 -5344236 - AluJb SINE Alu -3 309 7 4339 254 108 59 chr5 197741296 197743002 -5342530 + L1ME LINE L1 1658 3688 -2392 1593 171 0 43 chr5 197743002 197743307 -5342225 - AluJo SINE Alu -18 294 3 4339 254 108 59 chr5 197743307 197743661 -5341871 + L1ME LINE L1 3688 4023 -2057 4297 146 55 3 chr5 197743658 197744336 -5341196 + L1M1 LINE L1 15 727 -6838 * 2244 91 21 0 chr5 197744336 197744622 -5340910 + AluSx SINE Alu 1 292 -20 2322 110 53 41 chr5 197744696 197745113 -5340419 + L1MA3 LINE L1 5854 6275 -30 301 101 101 6 chr5 197745114 197745272 -5340260 + (TA)n Simple_repeat Simple_repeat 1 173 0 497 223 149 0 chr5 197745288 197745308 -5340224 + L1ME LINE L1 4002 4018 -2062 1071 183 179 30 chr5 197745308 197745570 -5339962 + AluJo SINE Alu 1 301 -1 497 223 149 0 chr5 197745570 197745697 -5339835 + L1ME LINE L1 4018 4171 -1909 7334 114 16 0 chr5 197745724 197746753 -5338779 + L1M1 LINE L1 1436 2480 -5085 17866 38 19 0 chr5 197746758 197749705 -5335827 - L1PA3 LINE L1 0 6155 3156 44489 36 8 5 chr5 197749705 197755827 -5329705 - L1PA2 LINE L1 -16 6139 1 33583 52 19 8 chr5 197755828 197760873 -5324659 + L1PA5 LINE L1 2468 7562 -11 205 143 13 78 chr5 197760878 197760955 -5324577 + A-rich Low_complexity Low_complexity 1 72 0 611 198 56 19 chr5 197760956 197761118 -5324414 + L1ME LINE L1 4167 4334 -1746 2153 117 0 3 chr5 197761365 197761716 -5323816 + AluSx SINE Alu 3 352 0 551 251 104 16 chr5 197762347 197762530 -5323002 + MIR SINE MIR 35 233 -29 211 176 0 0 chr5 197763347 197763381 -5322151 + (CAG)n Simple_repeat Simple_repeat 2 35 0 359 244 122 38 chr5 197764368 197764418 -5321114 + MIR SINE MIR 39 83 -179 2188 89 3 41 chr5 197764418 197764590 -5320942 - AluY SINE Alu -7 304 148 2619 53 0 0 chr5 197764590 197764892 -5320640 - AluY SINE Alu -8 303 2 2188 89 3 41 chr5 197764892 197765034 -5320498 - AluY SINE Alu -163 148 2 359 244 122 38 chr5 197765034 197765114 -5320418 + MIR SINE MIR 83 180 -82 15705 86 8 43 chr5 197765260 197766038 -5319494 - L1P LINE L1 -2180 3966 3162 2484 84 0 13 chr5 197766038 197766347 -5319185 + AluY SINE Alu 1 305 -6 15705 86 8 43 chr5 197766347 197767562 -5317970 - L1P LINE L1 -2984 3162 1905 2107 118 0 16 chr5 197767562 197767867 -5317665 + AluSc SINE Alu 1 300 -9 15705 86 8 43 chr5 197767867 197768065 -5317467 - L1P LINE L1 -4241 1905 1864 7583 46 3 41 chr5 197768065 197769646 -5315886 - SVA Other Other -799 1385 24 15705 86 8 43 chr5 197769646 197769847 -5315685 - L1P LINE L1 -4282 1864 1657 996 114 0 0 chr5 197769867 197769998 -5315534 - AluSq/x SINE Alu -180 133 3 4949 216 61 19 chr5 197770008 197771142 -5314390 - MER65-int LTR ERV1 -62 4809 3629 487 125 0 0 chr5 197771289 197771361 -5314171 + AluSc SINE Alu 223 294 -15 2189 85 14 14 chr5 197771836 197772131 -5313401 - AluSx SINE Alu -17 295 1 408 303 103 6 chr5 197772263 197772428 -5313104 + MIR SINE MIR 12 192 -70 1853 154 10 0 chr5 197772447 197772739 -5312793 + AluJb SINE Alu 2 296 -16 2006 145 0 16 chr5 197772751 197773054 -5312478 + AluSx SINE Alu 1 298 -14 362 196 168 42 chr5 197773112 197773255 -5312277 - L1ME4a LINE L1 -6 6115 5955 333 206 78 0 chr5 197773459 197773561 -5311971 - L1ME4a LINE L1 -181 5940 5831 2040 143 3 0 chr5 197773573 197773873 -5311659 - AluSx SINE Alu -11 301 1 2494 80 0 10 chr5 197773975 197774289 -5311243 + AluY SINE Alu 1 311 0 238 298 105 83 chr5 197775057 197775238 -5310294 - MLT1K LTR MaLR -238 350 166 1903 160 0 17 chr5 197775678 197775978 -5309554 + AluJo SINE Alu 4 298 -14 2412 100 0 3 chr5 197776512 197776821 -5308711 + AluSp SINE Alu 1 308 -5 873 275 122 14 chr5 197776981 197777268 -5308264 + HAL1 LINE L1 1579 1896 -611 553 308 24 57 chr5 197777286 197777617 -5307915 + L1MB2 LINE L1 417 736 -5567 400 119 0 0 chr5 197777620 197777679 -5307853 - AluS SINE Alu -249 59 1 1633 155 37 0 chr5 197777684 197777929 -5307603 + AluSx SINE Alu 40 293 -19 4870 217 44 48 chr5 197777933 197778405 -5307127 + L1MB2 LINE L1 2022 2494 -3888 1599 178 26 20 chr5 197778405 197778708 -5306824 + AluJo SINE Alu 1 305 -7 4870 217 44 48 chr5 197778708 197779619 -5305913 + L1MB2 LINE L1 2494 3407 -2975 1710 188 0 13 chr5 197779619 197779917 -5305615 - AluJo SINE Alu -18 294 1 4870 217 44 48 chr5 197779917 197780403 -5305129 + L1MB2 LINE L1 3407 3893 -2489 2371 80 3 3 chr5 197780403 197780703 -5304829 + THE1B LTR MaLR 1 300 -64 934 128 0 0 chr5 197780803 197780944 -5304588 + AluSg/x SINE Alu 169 309 -1 4317 190 42 20 chr5 197780948 197781046 -5304486 + L1MB2 LINE L1 3925 4019 -2363 1710 161 101 13 chr5 197781046 197781362 -5304170 + MER2 DNA MER2_type 1 344 0 4317 190 42 20 chr5 197781362 197782228 -5303304 + L1MB2 LINE L1 4019 4910 -1472 1181 144 0 0 chr5 197782255 197782422 -5303110 + AluSg/x SINE Alu 132 298 -12 2158 209 58 55 chr5 197782434 197782460 -5303072 + L1MB2 LINE L1 4898 4922 -1460 2291 88 27 0 chr5 197782460 197782755 -5302777 - AluSp SINE Alu -10 303 1 2158 209 58 55 chr5 197782755 197783345 -5302187 + L1MB2 LINE L1 4922 5516 -866 297 0 0 0 chr5 197783348 197783381 -5302151 + (TCTCCC)n Simple_repeat Simple_repeat 3 35 0 5411 80 28 60 chr5 197783381 197784459 -5301073 + SVA Other Other 72 868 -520 4687 127 16 91 chr5 197784477 197785507 -5300025 + SVA Other Other 433 1384 -2 1633 162 35 16 chr5 197785511 197785826 -5299706 + L1MB2 LINE L1 5501 5821 -586 830 152 35 6 chr5 197785826 197785990 -5299542 + L1MB2 LINE L1 6225 6400 -7 2355 80 0 3 chr5 197785991 197786280 -5299252 - AluY SINE Alu -23 288 1 1385 212 83 0 chr5 197786308 197786634 -5298898 + L1ME1 LINE L1 5473 5825 -341 278 208 28 14 chr5 197787090 197787162 -5298370 - MLT1J LTR MaLR -202 309 237 3886 188 50 46 chr5 197787539 197788128 -5297404 + L1MD2 LINE L1 4677 5262 -1097 1577 163 28 24 chr5 197788128 197788417 -5297115 + AluJo SINE Alu 1 290 -22 3886 188 50 46 chr5 197788417 197789338 -5296194 + L1MD2 LINE L1 5262 6193 -166 1308 207 35 24 chr5 197789365 197789703 -5295829 + L1MB8 LINE L1 5811 6152 -26 1663 164 3 26 chr5 197789707 197790017 -5295515 - AluJo SINE Alu -9 303 1 305 333 94 0 chr5 197790107 197790245 -5295287 + HAL1 LINE L1 2002 2152 -355 312 248 28 78 chr5 197790322 197790463 -5295069 + HAL1b LINE L1 771 904 -444 399 234 8 16 chr5 197790519 197790643 -5294889 + HAL1 LINE L1 2249 2371 -136 2116 122 0 0 chr5 197790728 197791032 -5294500 + AluSx SINE Alu 1 304 -8 251 246 70 126 chr5 197791542 197791741 -5293791 - MLT1L LTR MaLR -2 613 426 2107 118 0 0 chr5 197792456 197792743 -5292789 + AluSx SINE Alu 1 287 -25 26 0 0 0 chr5 197792743 197792769 -5292763 + AT_rich Low_complexity Low_complexity 1 26 0 2182 142 14 19 chr5 197793211 197793531 -5292001 + MER47A DNA MER2_type 1 320 -2003 2151 179 41 7 chr5 197793531 197793949 -5291583 - MSTB1 LTR MaLR 0 432 1 2182 142 14 19 chr5 197793949 197793987 -5291545 + MER47A DNA MER2_type 320 357 -9 2141 123 0 0 chr5 197794364 197794665 -5290867 + AluSx SINE Alu 1 301 -11 1977 104 0 66 chr5 197794856 197795173 -5290359 + AluSq SINE Alu 1 296 -17 1692 157 24 0 chr5 197795182 197795475 -5290057 + AluSx SINE Alu 1 300 -12 305 186 84 100 chr5 197795601 197795727 -5289805 + L1ME1 LINE L1 6056 6334 0 1182 250 43 5 chr5 197795919 197796287 -5289245 - HAL1 LINE L1 -156 2351 1970 2595 93 4 41 chr5 197796287 197796857 -5288675 - MER51A LTR ERV1 0 634 1 1364 243 120 54 chr5 197796866 197797295 -5288237 - HAL1 LINE L1 -542 1965 1473 1834 147 0 7 chr5 197797295 197797595 -5287937 + AluJb SINE Alu 1 298 -14 1364 243 120 54 chr5 197797595 197797849 -5287683 - HAL1 LINE L1 -1034 1473 1237 930 139 53 0 chr5 197797852 197798003 -5287529 + FRAM SINE Alu 1 153 -23 790 180 0 0 chr5 197798014 197798142 -5287390 + FLAM_C SINE Alu 1 128 -5 1641 247 103 67 chr5 197798164 197798801 -5286731 - HAL1 LINE L1 -1487 1020 344 1563 164 3 14 chr5 197798801 197799126 -5286406 - AluJb SINE Alu 0 322 1 1641 247 103 67 chr5 197799126 197799314 -5286218 - HAL1 LINE L1 -2163 344 164 237 135 0 0 chr5 197799467 197799504 -5286028 + Alu SINE Alu 84 120 -182 348 294 32 51 chr5 197799601 197799790 -5285742 - L1ME3A LINE L1 -204 5966 5774 715 65 0 0 chr5 197799821 197799913 -5285619 + AluSc SINE Alu 202 293 -16 449 254 63 8 chr5 197799918 197800044 -5285488 - HAL1 LINE L1 -2364 143 11 217 351 0 0 chr5 197800191 197800248 -5285284 - L3 LINE CR1 -19 1558 1502 879 150 0 0 chr5 197800351 197800484 -5285048 - FLAM_C SINE Alu 0 133 1 459 300 31 31 chr5 197801935 197802095 -5283437 - MIR SINE MIR -67 195 36 2376 62 0 7 chr5 197802164 197802473 -5283059 + AluY SINE Alu 2 308 -3 354 296 19 37 chr5 197802707 197802815 -5282717 + MIR3 SINE MIR 98 203 -5 2029 109 3 23 chr5 197803560 197803862 -5281670 + AluSx SINE Alu 5 300 -12 2339 78 0 3 chr5 197803862 197804159 -5281373 + AluY SINE Alu 1 298 -13 180 97 0 0 chr5 197804159 197804190 -5281342 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 2339 78 0 3 chr5 197804190 197804201 -5281331 + AluY SINE Alu 298 308 -3 280 360 21 59 chr5 197804778 197804854 -5280678 - MIR SINE MIR -11 251 174 927 124 0 29 chr5 197804854 197804991 -5280541 - FLAM_C SINE Alu 0 133 1 280 360 21 59 chr5 197804991 197805021 -5280511 - MIR SINE MIR -88 174 144 2049 139 0 0 chr5 197805021 197805322 -5280210 - AluSx SINE Alu -10 302 2 280 360 21 59 chr5 197805322 197805453 -5280079 - MIR SINE MIR -118 144 22 241 266 0 64 chr5 197805765 197805859 -5279673 - L1ME2 LINE L1 0 6164 6077 2648 219 29 11 chr5 197805904 197806519 -5279013 - L1M4 LINE L1 -1846 4300 3675 734 103 0 0 chr5 197806562 197806659 -5278873 - AluS SINE Alu -215 98 2 968 209 54 75 chr5 197806680 197806971 -5278561 + L1MC4a LINE L1 5871 6154 -1654 857 79 87 0 chr5 197806971 197807097 -5278435 + MER85 DNA T2_type 1 137 -2 968 209 54 75 chr5 197807097 197807193 -5278339 + L1MC4a LINE L1 6154 6250 -1558 486 264 9 0 chr5 197807203 197807309 -5278223 + FLAM_A SINE Alu 6 112 -30 1119 204 118 61 chr5 197807383 197807647 -5277885 - L1MD2 LINE L1 -17 6342 6050 2207 61 0 55 chr5 197807647 197807976 -5277556 + AluYb8 SINE Alu 1 311 -7 1119 204 118 61 chr5 197807976 197808074 -5277458 - L1MD2 LINE L1 -309 6050 5959 4539 204 86 21 chr5 197808127 197808577 -5276955 + L1MC4 LINE L1 6346 6766 -1276 2203 107 0 0 chr5 197808577 197808875 -5276657 + AluSx SINE Alu 1 298 -14 4539 204 86 21 chr5 197808875 197809540 -5275992 + L1MC4 LINE L1 6766 7533 -509 771 142 0 0 chr5 197809647 197809753 -5275779 - FRAM SINE Alu -53 123 18 2013 116 0 3 chr5 197809761 197810063 -5275469 - AluSx SINE Alu -11 301 1 230 318 94 0 chr5 197810070 197810155 -5275377 - MIR SINE MIR -10 252 160 235 262 39 87 chr5 197811409 197811477 -5274055 + MIR SINE MIR 79 142 -120 2008 90 24 7 chr5 197811477 197811765 -5273767 + AluSg SINE Alu 1 293 -17 235 262 39 87 chr5 197811765 197811799 -5273733 + MIR SINE MIR 142 176 -86 1158 109 0 0 chr5 197811839 197811995 -5273537 + AluSx SINE Alu 26 181 -131 790 100 0 18 chr5 197812095 197812205 -5273327 + MER4A LTR ERV1 556 663 -1 2940 98 261 11 chr5 197812209 197812758 -5272774 + MER4A-int LTR ERV1 1 686 -5912 1051 83 0 93 chr5 197812916 197813089 -5272443 - AluSg/x SINE Alu -16 294 139 2103 127 0 0 chr5 197813089 197813396 -5272136 - AluSx SINE Alu -5 307 1 1051 83 0 93 chr5 197813396 197813415 -5272117 - AluSg/x SINE Alu -171 139 120 6872 62 9 0 chr5 197813438 197814612 -5270920 - L1PA6 LINE L1 -7 6147 4967 342 263 118 41 chr5 197814612 197814784 -5270748 - L1MEc LINE L1 -5353 912 603 226 372 22 27 chr5 197815042 197815225 -5270307 - L1MEc LINE L1 -5950 446 265 2424 74 0 0 chr5 197816359 197816670 -5268862 - AluY SINE Alu 0 311 1 1849 139 0 48 chr5 197816853 197817169 -5268363 + AluSx SINE Alu 2 302 -10 2859 163 36 22 chr5 197817630 197818128 -5267404 - Tigger7 DNA MER2_type -228 505 1 2365 72 0 0 chr5 197818272 197818576 -5266956 + AluY SINE Alu 1 304 -7 833 269 47 27 chr5 197818626 197818673 -5266859 + L1MC4 LINE L1 6699 6744 -1298 2061 121 0 13 chr5 197818673 197818978 -5266554 + AluSx SINE Alu 1 301 -11 833 269 47 27 chr5 197818978 197819228 -5266304 + L1MC4 LINE L1 6744 7002 -1040 992 143 0 0 chr5 197819237 197819391 -5266141 + FRAM SINE Alu 1 151 -25 1004 174 78 48 chr5 197819413 197819569 -5265963 - L1M4 LINE L1 -1246 4900 4731 2175 108 0 0 chr5 197819569 197819874 -5265658 + AluSc SINE Alu 5 309 0 1004 174 78 48 chr5 197819874 197819987 -5265545 - L1M4 LINE L1 -1415 4731 4623 29 0 0 0 chr5 197819995 197820024 -5265508 + AT_rich Low_complexity Low_complexity 1 29 0 6589 82 17 22 chr5 197820024 197821165 -5264367 - SVA Other Other -761 1372 433 1509 30 10 41 chr5 197821347 197821544 -5263988 - L1PA7 LINE L1 -3 6151 5961 223 183 174 78 chr5 197821566 197821601 -5263931 + L2 LINE L2 3187 3217 -96 1729 192 0 0 chr5 197821601 197821898 -5263634 + AluJo SINE Alu 1 297 -15 223 183 174 78 chr5 197821898 197821977 -5263555 + L2 LINE L2 3217 3312 -1 308 150 33 0 chr5 197822106 197822166 -5263366 + L1M4 LINE L1 3922 3983 -2163 379 205 39 26 chr5 197822186 197822264 -5263268 - L2 LINE L2 -49 3264 3186 2132 99 7 0 chr5 197822319 197822611 -5262921 + AluSx SINE Alu 1 294 -18 975 148 143 19 chr5 197823477 197823686 -5261846 + MER46A DNA MER2_type 1 235 -1 2126 78 0 27 chr5 197824037 197824331 -5261201 - AluSx SINE Alu -26 286 1 240 286 14 14 chr5 197824335 197824405 -5261127 - MIR SINE MIR -17 245 176 224 322 61 26 chr5 197824386 197824501 -5261031 - MIR3 SINE MIR -43 165 47 * 422 275 33 0 chr5 197824760 197824880 -5260652 + MER94 DNA DNA 11 134 0 411 293 263 0 chr5 197825123 197825328 -5260204 + MIR SINE MIR 4 262 0 326 329 89 38 chr5 197825394 197825448 -5260084 + MIR SINE MIR 4 54 -208 1914 143 0 10 chr5 197825448 197825748 -5259784 - AluJb SINE Alu -13 299 3 326 329 89 38 chr5 197825748 197825891 -5259641 + MIR SINE MIR 54 217 -45 2182 122 0 0 chr5 197825891 197826194 -5259338 + AluSx SINE Alu 1 303 -9 326 329 89 38 chr5 197826194 197826232 -5259300 + MIR SINE MIR 217 252 -10 405 211 175 70 chr5 197827308 197827479 -5258053 + L2 LINE L2 3077 3265 -7 * 784 296 108 35 chr5 197827455 197828071 -5257461 - L2 LINE L2 -7 3265 2564 340 71 73 18 chr5 197828071 197828139 -5257393 + Alu SINE Alu 241 295 -7 2154 97 0 23 chr5 197828150 197828459 -5257073 + AluSq SINE Alu 5 306 -7 6743 103 24 21 chr5 197830267 197830722 -5254810 + PABL_A-int LTR ERV1 3562 4014 -1001 2174 101 3 0 chr5 197830722 197831019 -5254513 + AluSp SINE Alu 5 302 -11 6743 103 24 21 chr5 197831019 197831617 -5253915 + PABL_A-int LTR ERV1 4014 4618 -397 2106 125 0 3 chr5 197831625 197831936 -5253596 - AluSx SINE Alu -2 310 1 397 191 22 34 chr5 197831936 197832016 -5253516 + L1MEc LINE L1 128 208 -6188 818 101 67 0 chr5 197832230 197832349 -5253183 + FLAM_C SINE Alu 9 135 -8 999 157 79 0 chr5 197832427 197832605 -5252927 + LTR47A LTR ERVL 261 452 0 2415 80 3 0 chr5 197832627 197832939 -5252593 - AluSp SINE Alu 0 313 1 302 312 51 7 chr5 197832940 197833078 -5252454 + L1MEc LINE L1 223 366 -6030 2301 65 7 0 chr5 197834360 197834654 -5250878 + AluSq SINE Alu 1 296 -17 499 279 85 30 chr5 197834873 197835074 -5250458 - MIR SINE MIR -23 239 28 2106 53 42 11 chr5 197835622 197835906 -5249626 - AluSc SINE Alu -16 293 1 232 260 14 41 chr5 197836063 197836136 -5249396 - MIR SINE MIR -6 256 186 219 36 0 0 chr5 197836777 197836805 -5248727 + (TA)n Simple_repeat Simple_repeat 2 29 0 2265 103 7 3 chr5 197836805 197837097 -5248435 - AluSq SINE Alu -20 293 1 2458 75 0 0 chr5 197837127 197837419 -5248113 + AluY SINE Alu 1 292 -19 813 156 43 7 chr5 197837429 197837570 -5247962 - FRAM SINE Alu -30 146 1 1829 195 63 10 chr5 197837574 197837973 -5247559 - L1M4 LINE L1 -492 5692 5316 1997 127 24 3 chr5 197837973 197838265 -5247267 - AluSq SINE Alu -15 298 1 1789 183 0 23 chr5 197838267 197838567 -5246965 - AluJb SINE Alu -17 295 3 1829 195 63 10 chr5 197838567 197838646 -5246886 - L1M4 LINE L1 -868 5316 5174 207 0 0 0 chr5 197838649 197838672 -5246860 + (TTG)n Simple_repeat Simple_repeat 2 24 0 845 55 146 0 chr5 197838672 197838782 -5246750 - AluSc SINE Alu -182 127 2 851 230 0 0 chr5 197838810 197838971 -5246561 - FRAM SINE Alu -1 165 5 1230 197 19 31 chr5 197838974 197839294 -5246238 - L1M4 LINE L1 -954 5192 4877 499 214 103 0 chr5 197839422 197839548 -5245984 - MER77 LTR ERV1 -15 590 452 2186 125 7 0 chr5 197839549 197839852 -5245680 + AluSg SINE Alu 1 305 -5 2233 193 20 0 chr5 197839962 197840366 -5245166 + Tigger7 DNA MER2_type 2 413 -320 1025 68 0 0 chr5 197840373 197840491 -5245041 + AluSg1 SINE Alu 9 126 -183 1221 141 4 62 chr5 197840790 197840839 -5244693 + AluSg/x SINE Alu 90 140 -170 2554 57 3 0 chr5 197840839 197841140 -5244392 + AluY SINE Alu 3 304 -7 1221 141 4 62 chr5 197841140 197841317 -5244215 + AluSg/x SINE Alu 140 303 -7 1869 153 3 29 chr5 197841656 197841970 -5243562 - AluJb SINE Alu -4 308 3 311 270 22 34 chr5 197842054 197842143 -5243389 + MER5B DNA MER1_type 87 174 -4 2166 100 31 0 chr5 197842160 197842451 -5243081 - AluSq SINE Alu -13 300 1 1470 170 38 21 chr5 197842520 197842808 -5242724 + AluJb SINE Alu 7 299 -13 212 222 14 56 chr5 197843070 197843142 -5242390 - L2 LINE L2 -84 3229 3161 636 226 27 27 chr5 197843190 197843336 -5242196 - L2 LINE L2 -245 3068 2923 6159 157 103 92 chr5 197843339 197844042 -5241490 + L1MC3 LINE L1 6097 6791 -994 845 167 0 8 chr5 197844042 197844174 -5241358 + FLAM_C SINE Alu 1 131 -12 6159 157 103 92 chr5 197844174 197845010 -5240522 + L1MC3 LINE L1 6791 7785 0 681 139 0 9 chr5 197845202 197845310 -5240222 - FLAM_C SINE Alu 0 143 37 803 147 0 44 chr5 197845363 197845499 -5240033 + AluJo/FLAM SINE Alu 2 131 -171 2155 96 0 53 chr5 197845501 197845804 -5239728 + AluSg SINE Alu 1 287 -23 259 241 133 0 chr5 197846917 197847000 -5238532 - MIR SINE MIR -118 144 51 948 135 0 0 chr5 197847028 197847161 -5238371 - FLAM_C SINE Alu 0 133 1 352 159 217 0 chr5 197847664 197847733 -5237799 - L2 LINE L2 -4 3268 3185 417 272 8 32 chr5 197847796 197847921 -5237611 - MIR SINE MIR -67 141 20 1390 112 5 54 chr5 197847932 197848155 -5237377 + AluJb SINE Alu 87 298 -14 197 282 177 18 chr5 197850317 197850392 -5235140 - L2 LINE L2 -214 3058 2996 2647 50 3 0 chr5 197850392 197850694 -5234838 - AluY SINE Alu -8 303 1 197 282 177 18 chr5 197850694 197850838 -5234694 - L2 LINE L2 -276 2996 2804 709 274 188 15 chr5 197850861 197851201 -5234331 - L2 LINE L2 0 3313 2915 315 326 21 21 chr5 197851414 197851555 -5233977 - L2 LINE L2 0 3272 3132 390 261 94 29 chr5 197851977 197852115 -5233417 + MIR SINE MIR 74 220 -42 925 89 8 8 chr5 197852336 197852460 -5233072 - AluSq/x SINE Alu -187 125 2 2117 115 14 0 chr5 197853111 197853399 -5232133 + AluSx SINE Alu 1 292 -20 242 292 46 46 chr5 197854886 197855016 -5230516 - MIR SINE MIR -111 151 22 1961 124 13 19 chr5 197855210 197855524 -5230008 - AluJo SINE Alu 0 312 1 472 288 84 41 chr5 197855951 197856271 -5229261 + L1MC4 LINE L1 7587 7920 -122 1458 82 6 6 chr5 197856308 197856491 -5229041 - AluSp SINE Alu -129 184 2 241 263 21 32 chr5 197856494 197856589 -5228943 - MIR SINE MIR -55 207 114 253 148 115 33 chr5 197856640 197856701 -5228831 - MIR SINE MIR -132 130 65 217 143 0 0 chr5 197856691 197856733 -5228799 - L2 LINE L2 -337 2977 2936 * 202 340 97 10 chr5 197857738 197857841 -5227691 - L2 LINE L2 -32 3240 3129 245 221 61 99 chr5 197858035 197858166 -5227366 - L2 LINE L2 -474 2840 2715 200 297 22 0 chr5 197858295 197858386 -5227146 + CT-rich Low_complexity Low_complexity 5 97 0 2404 88 0 0 chr5 197858773 197859069 -5226463 - AluSq SINE Alu -17 296 1 193 233 70 105 chr5 197860295 197860381 -5225151 - MIR SINE MIR -67 195 113 304 197 40 0 chr5 197860858 197860934 -5224598 - MER103 DNA DNA -50 116 38 546 264 0 19 chr5 197861162 197861317 -5224215 - L2 LINE L2 -252 3061 2910 261 318 47 0 chr5 197862138 197862223 -5223309 - MIR SINE MIR -78 184 96 951 217 68 43 chr5 197862509 197862790 -5222742 - MLT1C LTR MaLR -2 465 178 1803 195 7 0 chr5 197862791 197863088 -5222444 - AluJb SINE Alu -13 299 1 257 105 158 35 chr5 197863088 197863145 -5222387 - MLT1C LTR MaLR -390 77 14 2101 87 3 61 chr5 197863673 197863984 -5221548 + AluSx SINE Alu 1 293 -19 2193 113 0 7 chr5 197864798 197865098 -5220434 + AluY SINE Alu 2 299 -12 1587 169 75 0 chr5 197865098 197865406 -5220126 + MER44D DNA MER2_type 403 605 0 361 181 203 90 chr5 197865406 197865582 -5219950 - MER77 LTR ERV1 -256 349 154 267 293 94 9 chr5 197865798 197865904 -5219628 - MIR SINE MIR -34 228 114 841 143 0 50 chr5 197865919 197866059 -5219473 - FLAM_C SINE Alu 0 133 1 219 324 70 0 chr5 197866164 197866235 -5219297 + MER91C DNA MER1_type 33 108 -32 239 303 72 66 chr5 197867056 197867208 -5218324 - L2 LINE L2 -1 3271 3119 2067 138 7 0 chr5 197867367 197867671 -5217861 - AluJb SINE Alu -6 306 1 2313 117 0 0 chr5 197868024 197868331 -5217201 - AluSx SINE Alu -5 307 1 1143 82 0 0 chr5 197868331 197868466 -5217066 - AluSq/x SINE Alu -178 135 1 2208 103 3 3 chr5 197868604 197868896 -5216636 - AluSx SINE Alu -5 307 16 388 195 24 0 chr5 197870025 197870107 -5215425 - MSTD LTR MaLR -80 316 233 485 301 149 39 chr5 197870110 197870498 -5215034 + L2 LINE L2 2878 3308 -5 1067 248 92 52 chr5 197871022 197871280 -5214252 - L1MC4 LINE L1 -17 8025 7779 2122 116 0 10 chr5 197871280 197871609 -5213923 - AluSx SINE Alu 0 312 1 1067 248 92 52 chr5 197871609 197871894 -5213638 - L1MC4 LINE L1 -263 7779 7460 612 78 0 0 chr5 197871902 197871979 -5213553 + AluS SINE Alu 2 78 -235 180 0 0 0 chr5 197871981 197872001 -5213531 + (CA)n Simple_repeat Simple_repeat 2 21 0 1486 109 168 20 chr5 197872001 197872305 -5213227 - MSTA LTR MaLR -37 391 43 28 0 0 0 chr5 197873149 197873177 -5212355 + AT_rich Low_complexity Low_complexity 1 28 0 2238 117 10 0 chr5 197874686 197874995 -5210537 - AluSx SINE Alu 0 312 1 181 321 0 37 chr5 197876110 197876191 -5209341 - MIR SINE MIR -92 116 39 202 267 17 33 chr5 197876828 197876888 -5208644 - MER5A DNA MER1_type -1 188 130 1857 121 31 4 chr5 197876891 197877148 -5208384 + AluSx SINE Alu 1 264 -48 303 260 203 6 chr5 197877485 197877613 -5207919 + MIR SINE MIR 36 193 -69 2417 71 3 3 chr5 197878990 197879286 -5206246 + AluY SINE Alu 1 296 -15 2131 137 0 0 chr5 197879414 197879714 -5205818 + AluSg SINE Alu 7 306 -4 213 65 0 0 chr5 197880085 197880116 -5205416 + (A)n Simple_repeat Simple_repeat 1 31 0 225 100 250 0 chr5 197880270 197880310 -5205222 - MIR SINE MIR -154 108 59 713 144 36 72 chr5 197881093 197881232 -5204300 - MER5A DNA MER1_type -55 134 1 236 155 0 99 chr5 197882102 197882173 -5203359 + AluSg/x SINE Alu 156 219 -81 944 155 81 0 chr5 197882455 197882616 -5202916 - AluJb SINE Alu -9 303 130 366 244 109 0 chr5 197882820 197882939 -5202593 - MIR3 SINE MIR -63 145 14 904 165 21 86 chr5 197883378 197883508 -5202024 + L1MB7 LINE L1 5938 6047 -137 2113 113 18 0 chr5 197883508 197883807 -5201725 + AluSx SINE Alu 5 308 0 904 165 21 86 chr5 197883807 197883918 -5201614 + L1MB7 LINE L1 6047 6164 -20 2175 104 28 0 chr5 197884914 197885203 -5200329 + AluSx SINE Alu 1 297 -15 624 91 0 0 chr5 197885206 197885283 -5200249 + AluSg SINE Alu 2 78 -232 2674 50 0 0 chr5 197885284 197885585 -5199947 + AluY SINE Alu 2 302 -9 1763 83 0 0 chr5 197885585 197885824 -5199708 + AluSg SINE Alu 68 307 0 2596 66 0 0 chr5 197886634 197886936 -5198596 - AluY SINE Alu -9 302 1 2552 71 0 0 chr5 197886999 197887310 -5198222 + AluSx SINE Alu 1 311 -1 223 219 78 16 chr5 197887325 197887389 -5198143 - MIR SINE MIR -125 137 70 180 295 16 16 chr5 197888668 197888729 -5196803 - MIR SINE MIR -91 171 111 195 129 0 0 chr5 197889098 197889129 -5196403 + (TG)n Simple_repeat Simple_repeat 2 32 0 1328 116 121 0 chr5 197889393 197889591 -5195941 + AluSq SINE Alu 5 226 -87 550 149 149 9 chr5 197889993 197890107 -5195425 + FLAM_C SINE Alu 1 130 -3 2249 77 0 51 chr5 197890215 197890527 -5195005 - AluY SINE Alu -10 301 6 2379 80 30 0 chr5 197890599 197890898 -5194634 - AluSx SINE Alu -4 308 1 233 233 22 56 chr5 197891407 197891497 -5194035 + MIR SINE MIR 35 121 -87 316 263 30 10 chr5 197891510 197891609 -5193923 + MIR SINE MIR 35 135 -127 1923 115 42 14 chr5 197891950 197892236 -5193296 + AluSx SINE Alu 1 294 -18 373 286 98 38 chr5 197892415 197892548 -5192984 - MIR SINE MIR -64 198 58 2372 102 0 0 chr5 197892564 197892869 -5192663 - AluSx SINE Alu -7 305 1 693 188 68 0 chr5 197892953 197893086 -5192446 - FLAM_C SINE Alu 0 143 2 1484 145 9 0 chr5 197893324 197893545 -5191987 - AluJo SINE Alu -4 308 86 2232 114 0 10 chr5 197893732 197894030 -5191502 - AluSx SINE Alu -17 295 1 2207 142 3 0 chr5 197894196 197894506 -5191026 - AluSq SINE Alu -2 311 1 1101 148 19 0 chr5 197894550 197894712 -5190820 + AluSg/x SINE Alu 134 298 -14 212 406 6 48 chr5 197894747 197894908 -5190624 + MIR SINE MIR 19 167 -61 282 56 0 0 chr5 197895958 197895994 -5189538 + (T)n Simple_repeat Simple_repeat 1 36 0 1568 147 98 11 chr5 197896162 197896448 -5189084 - AluSq SINE Alu -2 311 1 226 286 179 0 chr5 197896575 197896687 -5188845 + MIR SINE MIR 120 251 -11 2146 147 0 0 chr5 197896723 197897022 -5188510 + AluSq SINE Alu 1 299 -14 255 255 149 21 chr5 197897065 197897143 -5188389 - L2 LINE L2 0 3313 3220 2412 86 0 0 chr5 197897143 197897445 -5188087 + AluY SINE Alu 1 302 -9 255 255 149 21 chr5 197897445 197897460 -5188072 - L2 LINE L2 -93 3220 3208 1499 182 10 39 chr5 197897491 197897798 -5187734 + AluJo SINE Alu 1 298 -14 2320 114 0 13 chr5 197897803 197898118 -5187414 + AluSx SINE Alu 1 311 -1 355 303 87 11 chr5 197898416 197898601 -5186931 + L1ME LINE L1 5543 5741 -380 2269 91 3 3 chr5 197899136 197899443 -5186089 + AluSp SINE Alu 1 307 -6 216 0 0 0 chr5 197900499 197900523 -5185009 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2277 88 0 0 chr5 197900575 197900881 -5184651 + AluSx SINE Alu 1 306 0 811 189 0 0 chr5 197901094 197901221 -5184311 + FRAM SINE Alu 3 129 -47 2308 92 0 19 chr5 197901319 197901634 -5183898 - AluY SINE Alu -2 309 1 1373 187 13 79 chr5 197901768 197901920 -5183612 + AluJb SINE Alu 1 123 -191 2132 101 39 3 chr5 197901920 197902206 -5183326 + AluY SINE Alu 1 296 -15 1373 187 13 79 chr5 197902206 197902387 -5183145 + AluJb SINE Alu 123 314 0 558 112 84 28 chr5 197902471 197902578 -5182954 + L1MA8 LINE L1 6145 6257 -34 2230 123 0 0 chr5 197902693 197902995 -5182537 + AluSq SINE Alu 1 302 -11 2208 84 0 11 chr5 197903185 197903521 -5182011 - AluY SINE Alu 0 333 1 2136 120 3 3 chr5 197903524 197903823 -5181709 - AluSx SINE Alu -13 299 1 201 176 0 0 chr5 197903823 197903857 -5181675 + T-rich Low_complexity Low_complexity 1 34 0 1193 159 0 6 chr5 197903858 197904040 -5181492 - AluJb SINE Alu 0 312 132 197 59 59 0 chr5 197904041 197904075 -5181457 + T-rich Low_complexity Low_complexity 5 40 0 3640 73 34 0 chr5 197904075 197904581 -5180951 - L1PA8 LINE L1 -25 6147 5625 706 214 7 14 chr5 197904581 197904726 -5180806 - AluJb SINE Alu -166 146 3 379 173 78 16 chr5 197904763 197904848 -5180684 + FLAM SINE Alu 47 127 -6 615 49 62 0 chr5 197904856 197904937 -5180595 + AluY SINE Alu 209 294 -17 689 356 36 18 chr5 197905101 197905550 -5179982 + ERVL LTR ERVL 4910 5366 -398 1532 192 15 67 chr5 197906093 197906321 -5179211 + MER101 LTR ERV1 9 202 -272 2373 166 23 16 chr5 197906321 197906750 -5178782 + MSTB1 LTR MaLR 1 432 0 1532 192 15 67 chr5 197906750 197906984 -5178548 + MER101 LTR ERV1 202 447 -27 2311 104 0 0 chr5 197906997 197907295 -5178237 + AluSx SINE Alu 1 298 -14 183 42 0 0 chr5 197907309 197907333 -5178199 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2017 140 0 23 chr5 197907346 197907512 -5178020 + AluJb SINE Alu 1 158 -154 2511 109 56 0 chr5 197907512 197907869 -5177663 + MER51B LTR ERV1 1 377 0 2017 140 0 23 chr5 197907869 197908010 -5177522 + AluJb SINE Alu 158 301 -11 1306 240 3 24 chr5 197908016 197908304 -5177228 - AluJb SINE Alu -30 282 1 281 79 32 48 chr5 197908781 197908844 -5176688 + Alu SINE Alu 240 301 -1 2210 99 3 3 chr5 197908963 197909255 -5176277 - AluSp SINE Alu -21 292 1 471 183 24 0 chr5 197909310 197909392 -5176140 + L2 LINE L2 3184 3267 -5 438 284 14 35 chr5 197909430 197909571 -5175961 + MIR SINE MIR 6 143 -119 807 161 0 0 chr5 197909571 197909689 -5175843 + FLAM_C SINE Alu 1 118 -15 2009 110 65 10 chr5 197909723 197910013 -5175519 + AluSx SINE Alu 1 306 -6 2164 126 3 19 chr5 197910021 197910339 -5175193 + AluSq SINE Alu 1 313 0 226 355 33 0 chr5 197910339 197910460 -5175072 + MIR SINE MIR 138 262 0 434 145 243 1 chr5 197910465 197910585 -5174947 - MIR3 SINE MIR -63 145 14 188 333 36 12 chr5 197910886 197910970 -5174562 + L2 LINE L2 3186 3271 -1 186 118 0 0 chr5 197911071 197911105 -5174427 + (CAGGG)n Simple_repeat Simple_repeat 2 35 0 211 235 0 0 chr5 197911507 197911558 -5173974 - L2 LINE L2 -3 3269 3219 2275 108 16 0 chr5 197912132 197912439 -5173093 + AluSx SINE Alu 1 312 0 2324 97 0 0 chr5 197913229 197913529 -5172003 - AluSx SINE Alu -12 300 1 2387 91 3 0 chr5 197913624 197913931 -5171601 - AluSg SINE Alu -2 308 1 1985 126 14 3 chr5 197913949 197914234 -5171298 - AluSg SINE Alu -22 288 1 303 261 159 11 chr5 197914239 197914327 -5171205 - MIR SINE MIR -110 152 52 378 262 98 8 chr5 197914615 197914737 -5170795 - MIR3 SINE MIR -65 143 11 479 115 0 0 chr5 197915255 197915345 -5170187 + AluSp/q SINE Alu 226 315 0 266 203 238 0 chr5 197915358 197915501 -5170031 + L1MEc LINE L1 2083 2259 -4137 2246 112 7 3 chr5 197915630 197915934 -5169598 - AluSx SINE Alu -7 305 1 263 188 145 0 chr5 197915934 197916003 -5169529 - L1MC4 LINE L1 -100 7942 7864 2359 105 0 0 chr5 197916005 197916301 -5169231 + AluSq SINE Alu 1 296 -17 1837 157 24 0 chr5 197916310 197916603 -5168929 + AluSx SINE Alu 1 300 -12 289 164 91 109 chr5 197916742 197916852 -5168680 + L1ME1 LINE L1 6056 6163 -1 1118 250 43 5 chr5 197917046 197917414 -5168118 - HAL1 LINE L1 -156 2351 1970 2458 93 4 41 chr5 197917414 197917984 -5167548 - MER51A LTR ERV1 0 634 1 1246 236 77 54 chr5 197918108 197918422 -5167110 - HAL1 LINE L1 -690 1817 1483 1989 143 0 7 chr5 197918422 197918722 -5166810 + AluJb SINE Alu 1 298 -14 1246 236 77 54 chr5 197918722 197918966 -5166566 - HAL1 LINE L1 -1024 1483 1246 997 166 47 0 chr5 197918969 197919138 -5166394 + AluJo SINE Alu 122 298 -14 786 191 0 0 chr5 197919140 197919271 -5166261 + FLAM_C SINE Alu 1 131 -2 1407 240 105 68 chr5 197919290 197919927 -5165605 - HAL1 LINE L1 -1487 1020 344 1699 164 3 14 chr5 197919927 197920252 -5165280 - AluJb SINE Alu 0 322 1 1407 240 105 68 chr5 197920252 197920422 -5165110 - HAL1 LINE L1 -2163 344 182 338 280 30 91 chr5 197920618 197920916 -5164616 - L1MB8 LINE L1 -204 5966 5774 722 65 0 0 chr5 197920947 197921039 -5164493 + AluSc SINE Alu 202 293 -16 414 254 63 8 chr5 197921044 197921170 -5164362 - HAL1 LINE L1 -2364 143 11 219 351 0 0 chr5 197921317 197921374 -5164158 - L3 LINE CR1 -19 1558 1502 894 150 0 0 chr5 197921476 197921609 -5163923 - FLAM_C SINE Alu 0 133 1 456 294 14 35 chr5 197923076 197923219 -5162313 - MIR SINE MIR -87 175 36 2568 55 0 7 chr5 197923288 197923597 -5161935 + AluY SINE Alu 2 308 -3 349 296 19 37 chr5 197923831 197923939 -5161593 + MIR3 SINE MIR 98 203 -5 1579 109 0 5 chr5 197927255 197927456 -5158076 + AluSg/x SINE Alu 83 282 -28 299 137 0 0 chr5 197927872 197927923 -5157609 + L1MC4a LINE L1 7218 7268 -540 989 246 8 15 chr5 197927925 197928216 -5157316 + L1MC4 LINE L1 7414 7792 -203 203 230 0 138 chr5 197928217 197928304 -5157228 - L2 LINE L2 -343 2970 2896 931 212 15 20 chr5 197928466 197928664 -5156868 - MER57A-int LTR ERV1 -7338 199 3 821 219 153 66 chr5 197928667 197929000 -5156532 - MER57A LTR ERV1 0 403 42 567 150 24 71 chr5 197929888 197930015 -5155517 + AluJb SINE Alu 168 288 -24 1712 137 66 4 chr5 197931756 197932027 -5153505 + AluJb SINE Alu 3 290 -22 239 288 192 14 chr5 197932036 197932182 -5153350 - Charlie8 DNA MER1_type -2132 285 114 228 148 19 37 chr5 197932177 197932231 -5153301 + Alu SINE Alu 249 301 0 * 187 261 138 0 chr5 197932808 197932873 -5152659 + MIR3 SINE MIR 95 168 -40 996 121 82 6 chr5 197933254 197933436 -5152096 + L1MB2 LINE L1 5974 6169 -2 322 202 181 11 chr5 197933943 197934037 -5151495 + MIR3 SINE MIR 74 183 -25 1694 149 16 0 chr5 197934321 197934570 -5150962 - AluSx SINE Alu -7 305 53 255 276 172 0 chr5 197934598 197934685 -5150847 + L2 LINE L2 3212 3313 0 894 168 99 0 chr5 197934927 197935088 -5150444 + AluSx SINE Alu 53 229 -83 201 252 45 27 chr5 197936261 197936372 -5149160 + (CGGAG)n Simple_repeat Simple_repeat 1 113 0 2294 83 3 0 chr5 197937143 197937444 -5148088 + AluSp SINE Alu 1 302 -11 1279 195 19 11 chr5 197937447 197937708 -5147824 - AluJb SINE Alu -49 263 1 636 259 117 68 chr5 197937793 197937870 -5147662 - L1ME4a LINE L1 -95 6026 5954 1904 134 10 0 chr5 197937870 197938162 -5147370 - AluSq SINE Alu -18 295 1 636 259 117 68 chr5 197938162 197938295 -5147237 - L1ME4a LINE L1 -167 5954 5829 2151 111 3 3 chr5 197938295 197938602 -5146930 - AluSq SINE Alu -6 307 1 636 259 117 68 chr5 197938602 197938784 -5146748 - L1ME4a LINE L1 -292 5829 5614 1826 158 0 7 chr5 197939320 197939618 -5145914 + AluJb SINE Alu 1 296 -16 1722 106 63 50 chr5 197939620 197939923 -5145609 + AluSx SINE Alu 3 309 -3 1886 84 7 21 chr5 197940947 197941234 -5144298 + AluSx SINE Alu 30 312 0 1174 123 0 6 chr5 197941236 197941415 -5144117 + AluSg/x SINE Alu 132 309 0 1310 131 0 57 chr5 197942045 197942274 -5143258 + AluJb SINE Alu 85 300 -12 2133 110 3 0 chr5 197942275 197942575 -5142957 + AluSx SINE Alu 1 301 -11 2206 88 0 0 chr5 197942894 197943179 -5142353 - AluSq SINE Alu -28 285 1 754 125 97 57 chr5 197943179 197943355 -5142177 + L1MC/D LINE L1 5262 5444 -2341 465 149 27 0 chr5 197943361 197943435 -5142097 - AluJ/FLAM SINE Alu -235 77 2 2009 119 3 7 chr5 197943995 197944298 -5141234 - AluSq SINE Alu -11 302 1 198 0 0 0 chr5 197944461 197944483 -5141049 + (TG)n Simple_repeat Simple_repeat 2 23 0 217 132 19 19 chr5 197944856 197944909 -5140623 + CT-rich Low_complexity Low_complexity 3 55 0 1599 176 0 0 chr5 197944921 197945188 -5140344 - AluSx SINE Alu -45 267 1 2202 88 20 7 chr5 197945205 197945510 -5140022 - AluSg SINE Alu -1 309 1 223 271 0 0 chr5 197945875 197945923 -5139609 + L2 LINE L2 3264 3311 -2 1664 136 0 22 chr5 197946057 197946329 -5139203 - AluJo SINE Alu -4 308 43 262 259 17 0 chr5 197946427 197946485 -5139047 + MIR SINE MIR 84 142 -120 4860 140 6 16 chr5 197946528 197947314 -5138218 - L1PA16 LINE L1 -2 6164 5387 360 0 0 0 chr5 197947320 197947360 -5138172 + (TG)n Simple_repeat Simple_repeat 2 41 0 476 186 47 0 chr5 197947361 197947447 -5138085 - AluSg/x SINE Alu -17 293 204 1270 186 4 32 chr5 197947486 197947765 -5137767 + AluSx SINE Alu 11 281 -31 2009 143 0 3 chr5 197947836 197948144 -5137388 - AluSx SINE Alu -5 307 1 1380 207 3 32 chr5 197948144 197948457 -5137075 - AluJo SINE Alu -7 305 1 1329 174 46 16 chr5 197948469 197948774 -5136758 - L1PA16 LINE L1 -825 5321 5008 1922 150 3 0 chr5 197948824 197949124 -5136408 + AluSx SINE Alu 1 301 -11 2224 86 0 0 chr5 197949179 197949470 -5136062 + AluSc SINE Alu 7 297 -12 358 156 27 0 chr5 197999607 197999690 -5085842 - AluJ/FLAM SINE Alu -236 66 1 2417 58 27 10 chr5 197999774 198000067 -5085465 + AluY SINE Alu 1 298 -13 1888 166 0 17 chr5 198001343 198001644 -5083888 + AluJo SINE Alu 3 298 -14 2255 89 3 3 chr5 198002178 198002490 -5083042 + AluSp SINE Alu 1 312 0 877 281 109 3 chr5 198002637 198002935 -5082597 + L1M4c LINE L1 1596 2134 -609 538 331 18 52 chr5 198002951 198003277 -5082255 + L1M4c LINE L1 417 731 -5572 401 102 0 0 chr5 198003284 198003343 -5082189 - Alu SINE Alu -242 59 1 1623 155 36 12 chr5 198003348 198003599 -5081933 + AluSx SINE Alu 40 296 -16 1618 226 47 23 chr5 198003600 198004063 -5081469 + L1M4c LINE L1 2022 2510 -3872 1629 198 10 7 chr5 198004063 198004366 -5081166 + AluJo SINE Alu 1 304 -8 1618 226 47 23 chr5 198004366 198004678 -5080854 + L1M4c LINE L1 2510 2813 -3569 3562 218 97 37 chr5 198004778 198005278 -5080254 - L1MCa LINE L1 -4106 2458 1989 1868 152 20 3 chr5 198005278 198005575 -5079957 - AluJb SINE Alu -10 302 1 3562 218 97 37 chr5 198005575 198005753 -5079779 - L1MCa LINE L1 -4575 1989 1823 2561 72 0 3 chr5 198005753 198006060 -5079472 - AluY SINE Alu -5 306 1 3562 218 97 37 chr5 198006060 198006644 -5078888 - L1MCa LINE L1 -4741 1823 1120 1817 157 0 3 chr5 198006662 198006948 -5078584 - AluSx SINE Alu 0 312 28 325 346 50 0 chr5 198006955 198007114 -5078418 - L2 LINE L2 -628 2686 2520 229 290 20 40 chr5 198007387 198007487 -5078045 + L2 LINE L2 1812 1909 -1405 723 296 129 19 chr5 198007952 198008317 -5077215 + MLT1J2 LTR MaLR 46 450 0 1974 106 16 7 chr5 198008724 198009027 -5076505 + L1PB1 LINE L1 5844 6149 -2 331 232 14 0 chr5 198009184 198009253 -5076279 + MER102a DNA MER1_type 255 324 -6 313 143 0 63 chr5 198009302 198009365 -5076167 - MER2 DNA MER2_type -286 59 1 2301 185 58 82 chr5 198009368 198009467 -5076065 - L1 LINE L1 -2364 3782 3682 2223 134 0 3 chr5 198009467 198009780 -5075752 - AluSx SINE Alu 0 312 1 2301 185 58 82 chr5 198009780 198009808 -5075724 - L1 LINE L1 -2464 3682 3655 2498 100 8 0 chr5 198009808 198010167 -5075365 - THE1B LTR MaLR -2 362 1 2301 185 58 82 chr5 198010167 198010655 -5074877 - L1 LINE L1 -2491 3655 3191 1799 169 7 14 chr5 198010655 198010951 -5074581 + AluJo SINE Alu 1 294 -18 2301 185 58 82 chr5 198010951 198011208 -5074324 - L1 LINE L1 -2955 3191 2929 5323 244 21 38 chr5 198011325 198013044 -5072488 + L1MEc LINE L1 2143 3786 -2429 1756 156 55 27 chr5 198013044 198013372 -5072160 - MER1B DNA MER1_type 0 337 1 5323 244 21 38 chr5 198013372 198013502 -5072030 + L1MEc LINE L1 3786 3917 -2298 2182 137 0 0 chr5 198013505 198013805 -5071727 + AluSx SINE Alu 1 300 -12 1003 185 40 22 chr5 198013808 198014030 -5071502 - L1MCa LINE L1 -5311 734 509 1366 109 0 21 chr5 198014090 198014316 -5071216 - AluSq SINE Alu 0 316 95 1490 126 114 27 chr5 198014718 198014981 -5070551 + AluSg SINE Alu 14 299 -11 431 292 112 21 chr5 198015516 198015749 -5069783 + MIR SINE MIR 9 262 0 220 209 0 0 chr5 198016514 198016557 -5068975 + MER91 DNA MER1_type 98 140 0 916 228 51 36 chr5 198017254 198017530 -5068002 + MER102b DNA MER1_type 36 315 -26 613 331 86 8 chr5 198020453 198020815 -5064717 - L2 LINE L2 -5 3308 2919 2290 301 153 25 chr5 198020893 198022664 -5062868 - L2 LINE L2 -519 2795 800 482 274 126 16 chr5 198022680 198022935 -5062597 + L2 LINE L2 2448 2730 -584 2263 96 0 0 chr5 198024435 198024737 -5060795 + AluSg SINE Alu 1 302 0 233 357 91 15 chr5 198024869 198025068 -5060464 + L2 LINE L2 2816 3029 -243 238 167 250 0 chr5 198025911 198025971 -5059561 - MIR SINE MIR -165 97 23 255 291 38 0 chr5 198026223 198026302 -5059230 - MIR SINE MIR -32 230 149 29 70 0 0 chr5 198027503 198027560 -5057972 + GC_rich Low_complexity Low_complexity 1 57 0 184 225 238 0 chr5 198027667 198027747 -5057785 - MIR SINE MIR -80 128 30 454 311 72 30 chr5 198027909 198027964 -5057568 + MIR SINE MIR 17 68 -194 2659 39 7 3 chr5 198027964 198028273 -5057259 + AluY SINE Alu 2 311 0 454 311 72 30 chr5 198028273 198028452 -5057080 + MIR SINE MIR 68 261 -1 406 266 153 39 chr5 198028660 198028889 -5056643 - MIR SINE MIR 0 262 8 2402 78 7 0 chr5 198029232 198029550 -5055982 - AluSx SINE Alu 0 320 1 1544 106 59 8 chr5 198029550 198029804 -5055728 + L1MC3 LINE L1 7335 7601 -184 2246 87 0 48 chr5 198029877 198030189 -5055343 - AluY SINE Alu -14 297 1 2243 111 7 3 chr5 198030189 198030486 -5055046 - AluSx SINE Alu -11 301 4 340 297 28 113 chr5 198032705 198032988 -5052544 + Charlie8 DNA MER1_type 1 259 -2158 1827 136 3 65 chr5 198034272 198034595 -5050937 - AluSx SINE Alu -9 303 1 226 326 202 0 chr5 198035646 198035735 -5049797 - MIR SINE MIR -67 141 35 201 39 0 0 chr5 198035932 198035958 -5049574 + (CA)n Simple_repeat Simple_repeat 1 26 0 554 194 65 21 chr5 198035990 198036176 -5049356 + L1MB3 LINE L1 3306 3499 -2647 4166 189 18 22 chr5 198036187 198037270 -5048262 + L1MB3 LINE L1 4536 5609 -574 2223 138 0 0 chr5 198037270 198037575 -5047957 + AluJb SINE Alu 1 305 -7 4166 189 18 22 chr5 198037575 198038103 -5047429 + L1MB3 LINE L1 5609 6138 -45 2034 112 17 7 chr5 198038107 198038403 -5047129 + AluSp SINE Alu 1 299 -14 1467 238 28 32 chr5 198038403 198038592 -5046940 - L1M4 LINE L1 -2589 3557 3369 1447 209 74 60 chr5 198038592 198039090 -5046442 + LTR22 LTR ERVK 1 505 -4 1467 238 28 32 chr5 198039090 198039400 -5046132 - L1M4 LINE L1 -2777 3369 3060 2226 131 0 6 chr5 198039406 198039720 -5045812 - AluSx SINE Alu 0 312 1 402 197 0 0 chr5 198039763 198039834 -5045698 - L1MDa LINE L1 -6452 88 18 1829 118 9 121 chr5 198039981 198040321 -5045211 + AluJb SINE Alu 1 302 0 2331 111 0 0 chr5 198040340 198040638 -5044894 + AluSx SINE Alu 1 298 -14 299 239 0 44 chr5 198040781 198040894 -5044638 - L1ME3A LINE L1 0 6170 6063 1544 161 27 0 chr5 198040897 198041157 -5044375 - MER73 LTR ERVL 0 644 378 4534 84 40 13 chr5 198041157 198041533 -5043999 + L1PB1 LINE L1 5391 5795 -356 342 67 0 0 chr5 198041533 198041578 -5043954 + (TA)n Simple_repeat Simple_repeat 2 46 0 4534 84 40 13 chr5 198041578 198041881 -5043651 + L1PB1 LINE L1 5795 6088 -63 416 286 23 29 chr5 198042468 198042643 -5042889 + CT-rich Low_complexity Low_complexity 1 174 0 2054 164 40 70 chr5 198043137 198043378 -5042154 - MSTB1 LTR MaLR 0 432 208 2096 134 0 10 chr5 198043378 198043685 -5041847 - AluSx SINE Alu -8 304 1 2054 164 40 70 chr5 198043685 198043888 -5041644 - MSTB1 LTR MaLR -224 208 1 251 207 20 218 chr5 198044115 198044203 -5041329 + MER5C DNA MER1_type 1 105 -219 1497 188 58 4 chr5 198044203 198044479 -5041053 + AluJb SINE Alu 3 293 -19 251 207 20 218 chr5 198044479 198044574 -5040958 + MER5C DNA MER1_type 105 217 -107 2510 68 0 0 chr5 198044574 198044869 -5040663 - AluY SINE Alu -16 295 1 251 207 20 218 chr5 198044869 198044958 -5040574 + MER5C DNA MER1_type 217 322 -2 1887 118 71 4 chr5 198044958 198045238 -5040294 - AluSx SINE Alu -3 309 11 954 138 48 12 chr5 198045247 198045414 -5040118 - L1PA10 LINE L1 -3 6165 5993 251 207 20 218 chr5 198045414 198045487 -5040045 + MER5C DNA MER1_type 201 287 -37 2321 100 0 0 chr5 198045488 198045787 -5039745 + AluSg SINE Alu 1 299 -11 526 267 47 21 chr5 198046283 198046474 -5039058 + MIR SINE MIR 67 262 0 1947 125 56 0 chr5 198046477 198046747 -5038785 + AluSx SINE Alu 1 289 -23 450 36 0 0 chr5 198046747 198046803 -5038729 + (TA)n Simple_repeat Simple_repeat 2 57 0 1947 125 56 0 chr5 198046803 198046820 -5038712 + AluSx SINE Alu 289 304 -8 984 224 72 104 chr5 198046964 198047333 -5038199 - MLT1C LTR MaLR -9 458 106 1892 168 3 3 chr5 198047333 198047624 -5037908 + AluJb SINE Alu 1 291 -21 984 224 72 104 chr5 198047624 198047727 -5037805 - MLT1C LTR MaLR -361 106 1 2391 84 10 0 chr5 198047785 198048081 -5037451 + AluSp SINE Alu 1 299 -14 1219 162 31 22 chr5 198048149 198048371 -5037161 - AluJo SINE Alu -88 224 1 2168 103 23 0 chr5 198048382 198048684 -5036848 - AluSx SINE Alu -3 309 1 2375 96 6 10 chr5 198048711 198049025 -5036507 + AluSp SINE Alu 1 313 0 360 235 86 0 chr5 198049143 198049224 -5036308 + MER102b DNA MER1_type 4 91 -250 2393 92 0 0 chr5 198049266 198049558 -5035974 + AluSc SINE Alu 5 296 -13 2093 111 43 0 chr5 198049727 198050006 -5035526 + AluSc SINE Alu 1 291 -18 1155 100 6 47 chr5 198050012 198050182 -5035350 + FRAM SINE Alu 1 160 -16 2247 119 0 3 chr5 198050190 198050500 -5035032 + AluSq SINE Alu 1 309 -4 571 175 12 44 chr5 198050500 198050570 -5034962 + Charlie5 DNA MER1_type 2431 2502 -83 2531 62 0 13 chr5 198050570 198050875 -5034657 - AluY SINE Alu -9 302 2 571 175 12 44 chr5 198050875 198050964 -5034568 + Charlie5 DNA MER1_type 2502 2585 0 185 316 74 11 chr5 198051068 198051163 -5034369 + MIR SINE MIR 21 121 -141 183 300 0 0 chr5 198051203 198051243 -5034289 + L2 LINE L2 3210 3249 -23 2319 114 0 3 chr5 198051375 198051683 -5033849 + AluSx SINE Alu 1 307 -5 4942 46 5 0 chr5 198052033 198052621 -5032911 + LTR10C LTR ERV1 1 591 0 192 335 60 50 chr5 198053067 198053098 -5032434 - L2 LINE L2 -1604 1710 1681 2079 125 24 0 chr5 198053098 198053393 -5032139 + AluSq SINE Alu 1 302 -11 192 335 60 50 chr5 198053393 198053543 -5031989 - L2 LINE L2 -1633 1681 1527 1945 166 0 0 chr5 198053743 198054038 -5031494 - AluJb SINE Alu -17 295 1 866 206 63 128 chr5 198054059 198054217 -5031315 + MER34 LTR ERV1 1 168 -374 2515 81 0 0 chr5 198054217 198054527 -5031005 - AluY SINE Alu -1 310 1 866 206 63 128 chr5 198054527 198054640 -5030892 + MER34 LTR ERV1 168 287 -255 1906 150 28 0 chr5 198054640 198054926 -5030606 + AluJb SINE Alu 1 294 -18 866 206 63 128 chr5 198054926 198054937 -5030595 + MER34 LTR ERV1 287 297 -245 808 197 0 0 chr5 198054937 198055069 -5030463 + FLAM_A SINE Alu 1 132 -1 866 206 63 128 chr5 198055069 198055242 -5030290 + MER34 LTR ERV1 297 381 -161 896 132 0 29 chr5 198055242 198055378 -5030154 - FLAM_C SINE Alu -1 132 1 866 206 63 128 chr5 198055378 198055517 -5030015 + MER34 LTR ERV1 381 527 -15 1829 168 106 130 chr5 198055517 198055785 -5029747 - MER97b DNA MER1_type? -219 834 561 1947 161 0 16 chr5 198055785 198056102 -5029430 + AluJo SINE Alu 1 312 0 1829 168 106 130 chr5 198056102 198056237 -5029295 - MER97b DNA MER1_type? -492 561 424 2176 125 3 3 chr5 198056237 198056533 -5028999 - AluSg1 SINE Alu -13 296 1 1829 168 106 130 chr5 198056533 198056546 -5028986 - MER97b DNA MER1_type? -629 424 412 1664 92 146 31 chr5 198056546 198056807 -5028725 - AluSx SINE Alu -21 291 1 1829 168 106 130 chr5 198056807 198056992 -5028540 - MER97b DNA MER1_type? -641 412 251 2119 117 0 0 chr5 198056992 198057300 -5028232 + AluSx SINE Alu 1 308 0 1829 168 106 130 chr5 198057300 198057503 -5028029 - MER97b DNA MER1_type? -802 251 45 282 220 353 0 chr5 198057553 198057703 -5027829 - L2 LINE L2 -356 2958 2756 2400 94 0 0 chr5 198058596 198058895 -5026637 - AluY SINE Alu -12 299 1 511 252 35 0 chr5 198059039 198059154 -5026378 + MLT1F LTR MaLR 4 122 -420 * 941 169 83 86 chr5 198059146 198059266 -5026266 + MLT1F LTR MaLR 244 363 -179 2377 111 0 3 chr5 198059266 198059573 -5025959 - AluSx SINE Alu -6 306 1 941 169 83 86 chr5 198059573 198059730 -5025802 + MLT1F LTR MaLR 363 520 -22 1111 155 17 0 chr5 198060369 198060543 -5024989 - AluSp SINE Alu 0 313 137 1124 135 0 0 chr5 198060610 198060766 -5024766 - AluSg/x SINE Alu -18 292 137 189 128 0 77 chr5 198060836 198060875 -5024657 - L2 LINE L2 -21 3292 3257 * 568 255 96 11 chr5 198060854 198060913 -5024619 - MIR SINE MIR -30 232 179 2106 149 0 0 chr5 198060913 198061214 -5024318 - AluSx SINE Alu -11 301 1 568 255 96 11 chr5 198061214 198061342 -5024190 - MIR SINE MIR -83 179 29 222 300 79 62 chr5 198061415 198061581 -5023951 - L2 LINE L2 -358 2956 2781 2410 102 0 3 chr5 198061581 198061894 -5023638 + AluSx SINE Alu 1 312 0 222 300 79 62 chr5 198061894 198062017 -5023515 - L2 LINE L2 -533 2781 2662 454 267 20 34 chr5 198062017 198062163 -5023369 - MER5A DNA MER1_type 0 189 46 2356 104 0 0 chr5 198062539 198062837 -5022695 + AluSx SINE Alu 2 299 -13 545 252 0 0 chr5 198062856 198062971 -5022561 + FLAM_A SINE Alu 10 124 -18 2416 71 10 0 chr5 198062976 198063271 -5022261 + AluY SINE Alu 1 298 -13 267 212 26 88 chr5 198063272 198063385 -5022147 + L1MC5 LINE L1 7822 7927 -34 341 143 0 0 chr5 198065492 198065541 -5019991 + AluSx SINE Alu 6 54 -248 8093 63 12 2 chr5 198065541 198066538 -5018994 - LTR13 LTR ERVK 0 1007 1 2045 85 0 0 chr5 198066539 198066785 -5018747 + AluSx SINE Alu 50 295 -17 346 164 55 0 chr5 198066884 198066957 -5018575 - MER45A DNA AcHobo -5 173 97 2453 60 13 0 chr5 198066957 198067259 -5018273 + AluY SINE Alu 1 306 -5 6577 73 46 22 chr5 198067276 198068208 -5017324 + SVA Other Other 433 1386 0 508 282 0 0 chr5 198068218 198068328 -5017204 - MER45A DNA AcHobo -68 110 1 1781 168 9 25 chr5 198068423 198068738 -5016794 - AluJo SINE Alu 0 312 3 1486 178 48 38 chr5 198068740 198069033 -5016499 - AluJo SINE Alu -16 296 1 270 257 0 0 chr5 198069041 198069115 -5016417 - Charlie2a DNA MER1_type -1204 1658 1585 731 215 124 17 chr5 198069118 198069351 -5016181 + L1ME1 LINE L1 5743 6000 -166 661 293 137 7 chr5 198069384 198069684 -5015848 + MLT1J2 LTR MaLR 112 450 0 259 295 77 32 chr5 198069684 198069840 -5015692 - ERVL LTR ERVL -1406 4358 4196 1259 331 125 4 chr5 198069936 198070624 -5014908 - ERVL LTR ERVL -1712 4052 3282 1999 295 56 48 chr5 198070649 198070771 -5014761 - ERVL LTR ERVL -2600 3164 3044 2033 105 22 0 chr5 198070771 198071097 -5014435 + AluSg SINE Alu 1 332 0 1999 295 56 48 chr5 198071097 198071439 -5014093 - ERVL LTR ERVL -2720 3044 2706 2172 105 7 10 chr5 198071439 198071743 -5013789 + AluSx SINE Alu 1 303 -9 1999 295 56 48 chr5 198071743 198072246 -5013286 - ERVL LTR ERVL -3058 2706 2188 21 71 0 0 chr5 198072390 198072432 -5013100 + AT_rich Low_complexity Low_complexity 1 42 0 274 250 26 26 chr5 198072717 198072793 -5012739 + MIR SINE MIR 108 183 -79 449 34 17 0 chr5 198073136 198073195 -5012337 + (CGG)n Simple_repeat Simple_repeat 3 62 0 394 242 50 96 chr5 198074538 198074757 -5010775 + L2 LINE L2 3029 3237 -35 214 232 125 0 chr5 198075432 198075488 -5010044 + L2 LINE L2 3156 3218 -54 283 250 45 11 chr5 198075525 198075613 -5009919 - MIR SINE MIR -106 156 66 490 281 64 30 chr5 198076028 198076231 -5009301 + MER102b DNA MER1_type 96 305 -36 221 227 107 27 chr5 198076460 198076535 -5008997 + MIR SINE MIR 44 124 -84 1342 191 14 35 chr5 198076548 198076831 -5008701 + AluJo SINE Alu 6 282 -30 753 220 0 0 chr5 198077513 198077645 -5007887 - FLAM_A SINE Alu -1 132 1 401 234 81 0 chr5 198077919 198078030 -5007502 - L2 LINE L2 -3 3269 3150 194 309 163 0 chr5 198078096 198078181 -5007351 + MIR SINE MIR 51 121 -141 2641 51 0 6 chr5 198078181 198078494 -5007038 + AluY SINE Alu 1 311 0 194 309 163 0 chr5 198078494 198078531 -5007001 + MIR SINE MIR 121 193 -69 270 291 154 8 chr5 198078617 198078734 -5006798 - L2 LINE L2 -218 3054 2921 221 367 0 20 chr5 198078779 198078877 -5006655 - L2 LINE L2 -506 2808 2713 269 387 36 0 chr5 198078998 198079109 -5006423 + MER5B DNA MER1_type 64 178 0 340 325 50 8 chr5 198079303 198079423 -5006109 - L2 LINE L2 -14 3258 3134 2724 29 3 3 chr5 198080087 198080397 -5005135 + AluY SINE Alu 1 310 -1 727 269 70 26 chr5 198080467 198080694 -5004838 - MIR SINE MIR -6 256 20 273 288 135 35 chr5 198081230 198081400 -5004132 - L2 LINE L2 -1 3312 3126 638 219 17 0 chr5 198082000 198082119 -5003413 - AluSg/x SINE Alu -10 300 180 3622 138 148 33 chr5 198082123 198082335 -5003197 - Charlie1 DNA MER1_type -31 2730 2544 2218 127 0 0 chr5 198082335 198082627 -5002905 + AluSx SINE Alu 1 292 -20 3622 138 148 33 chr5 198082627 198083281 -5002251 - Charlie1 DNA MER1_type -217 2544 1765 278 236 28 28 chr5 198083770 198083842 -5001690 - L2 LINE L2 -1 3271 3200 612 241 108 28 chr5 198085232 198085444 -5000088 - MIR SINE MIR 0 262 34 1799 160 46 0 chr5 198085618 198085924 -4999608 - MER2 DNA MER2_type -25 320 1 2481 56 0 3 chr5 198085959 198086262 -4999270 + AluY SINE Alu 1 302 -9 379 204 107 10 chr5 198086882 198086985 -4998547 - MLT1H LTR MaLR 0 549 437 298 210 32 57 chr5 198087005 198087129 -4998403 - MLT1H LTR MaLR -221 328 208 2443 68 0 3 chr5 198087342 198087651 -4997881 - AluY SINE Alu -3 308 1 490 301 174 9 chr5 198087701 198087920 -4997612 - MIR SINE MIR 0 262 8 646 239 102 35 chr5 198088245 198088471 -4997061 + MIR SINE MIR 22 262 0 207 152 0 0 chr5 198089624 198089670 -4995862 + CT-rich Low_complexity Low_complexity 3 48 0 1779 152 35 7 chr5 198091462 198091752 -4993780 + AluJo SINE Alu 1 298 -14 502 281 95 8 chr5 198091876 198092186 -4993346 - L1ME4a LINE L1 -175 5946 5609 309 322 84 81 chr5 198092427 198092759 -4992773 - L1ME LINE L1 -382 5788 5456 1496 186 3 28 chr5 198092770 198093061 -4992471 + AluJo SINE Alu 15 298 -14 2182 93 0 35 chr5 198093072 198093383 -4992149 + AluSg SINE Alu 1 300 -10 211 369 77 0 chr5 198093963 198094069 -4991463 + MIR SINE MIR 91 210 -52 2462 43 0 7 chr5 198094069 198094368 -4991164 + AluY SINE Alu 1 297 -14 211 369 77 0 chr5 198094368 198094391 -4991141 + MIR SINE MIR 210 230 -32 408 305 23 102 chr5 198094592 198094897 -4990635 - L2 LINE L2 -19 3253 2973 539 279 26 1 chr5 198095801 198095959 -4989573 - MIR SINE MIR -62 146 11 510 281 181 36 chr5 198096957 198097398 -4988134 - L2 LINE L2 -508 2806 2302 180 0 0 0 chr5 198098679 198098699 -4986833 + (CTCA)n Simple_repeat Simple_repeat 4 23 0 385 339 206 38 chr5 198098704 198099902 -4985630 + L2 LINE L2 1065 2464 -850 813 246 70 13 chr5 198099906 198100134 -4985398 + MIR SINE MIR 3 243 -19 512 323 49 83 chr5 198100386 198100853 -4984679 + L2 LINE L2 2817 3267 -5 246 342 155 32 chr5 198100872 198101059 -4984473 + MIR SINE MIR 32 241 -21 382 320 0 0 chr5 198101355 198101458 -4984074 - MIR SINE MIR -79 183 81 209 175 0 105 chr5 198102187 198102244 -4983288 - MIR SINE MIR -109 153 103 243 378 55 0 chr5 198104134 198104261 -4981271 - L2 LINE L2 -223 3049 2916 615 166 59 150 chr5 198104291 198104378 -4981154 - MER2 DNA MER2_type -54 291 198 1834 112 74 0 chr5 198104378 198104647 -4980885 + AluSx SINE Alu 1 289 -23 615 166 59 150 chr5 198104647 198104662 -4980870 - MER2 DNA MER2_type -147 198 183 2125 103 0 30 chr5 198104662 198104964 -4980568 + AluSx SINE Alu 9 301 -11 615 166 59 150 chr5 198104964 198105038 -4980494 - MER2 DNA MER2_type -162 183 104 884 136 0 23 chr5 198105038 198105170 -4980362 + FLAM_C SINE Alu 1 129 -4 615 166 59 150 chr5 198105170 198105311 -4980221 - MER2 DNA MER2_type -241 104 1 191 36 36 0 chr5 198107791 198107819 -4977713 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 242 276 150 8 chr5 198107997 198108124 -4977408 - MIR SINE MIR -98 164 20 193 337 25 55 chr5 198108072 198108235 -4977297 + MIR3 SINE MIR 10 167 -41 * 912 138 0 0 chr5 198108717 198108847 -4976685 - FLAM_C SINE Alu -3 130 1 180 313 109 50 chr5 198111127 198111328 -4974204 + L3 LINE CR1 1059 1271 -306 221 259 114 6 chr5 198111489 198111663 -4973869 + MIR3 SINE MIR 45 205 -50 253 299 108 84 chr5 198112370 198112584 -4972948 - L2 LINE L2 -100 3172 2954 185 351 107 0 chr5 198115841 198115972 -4969560 - L2 LINE L2 -3 3269 3125 317 265 48 0 chr5 198116136 198116219 -4969313 + MIR SINE MIR 66 152 -110 339 302 121 8 chr5 198118833 198119214 -4966318 - L2 LINE L2 -148 3165 2737 518 185 42 0 chr5 198119262 198119381 -4966151 + L1MB7 LINE L1 5570 5693 -481 798 110 0 0 chr5 198119381 198119490 -4966042 + AluJb SINE Alu 183 291 -21 640 236 0 0 chr5 198119493 198119637 -4965895 + L1MB7 LINE L1 5683 5826 -348 894 159 0 0 chr5 198119638 198119770 -4965762 + FLAM_C SINE Alu 2 133 0 808 221 13 11 chr5 198119781 198119968 -4965564 + L1MB7 LINE L1 5927 6106 -74 2381 71 13 3 chr5 198119968 198120278 -4965254 + AluSp SINE Alu 1 313 0 808 221 13 11 chr5 198120278 198120315 -4965217 + L1MB7 LINE L1 6106 6141 -39 1637 97 0 5 chr5 198120315 198120532 -4965000 + AluSq SINE Alu 1 216 -97 2384 63 0 10 chr5 198120532 198120831 -4964701 + AluY SINE Alu 1 297 -14 582 138 0 0 chr5 198120831 198120918 -4964614 + Alu SINE Alu 204 290 -21 193 316 123 35 chr5 198121255 198121369 -4964163 - MIR3 SINE MIR -50 158 35 182 216 27 0 chr5 198123188 198123225 -4962307 + MIR SINE MIR 112 149 -59 336 270 35 26 chr5 198123246 198123361 -4962171 - L2 LINE L2 -16 3256 3141 640 292 294 18 chr5 198123480 198124524 -4961008 + L2 LINE L2 764 2095 -1219 180 237 51 0 chr5 198124556 198124615 -4960917 + MER5B DNA MER1_type 2 63 -115 486 271 21 42 chr5 198124643 198124787 -4960745 - MER5B DNA MER1_type -37 141 1 422 297 61 0 chr5 198124788 198124936 -4960596 + L2 LINE L2 2177 2333 -981 191 293 38 90 chr5 198124949 198125082 -4960450 + L3 LINE CR1 1261 1386 -191 242 286 0 0 chr5 198125200 198125270 -4960262 - MIR SINE MIR -106 102 33 2344 258 146 45 chr5 198125829 198126053 -4959479 - L2 LINE L2 -140 3173 2973 2252 116 0 0 chr5 198126053 198126363 -4959169 + AluSx SINE Alu 3 312 0 2344 258 146 45 chr5 198126363 198126934 -4958598 - L2 LINE L2 -340 2973 2461 1556 112 140 67 chr5 198126934 198127057 -4958475 - MER1B DNA MER1_type -2373 337 224 2192 104 0 13 chr5 198127057 198127364 -4958168 - AluSx SINE Alu -9 303 1 1556 112 140 67 chr5 198127364 198127554 -4957978 - MER1B DNA MER1_type -2486 224 1 2344 258 146 45 chr5 198127554 198128223 -4957309 - L2 LINE L2 -852 2461 1545 239 309 59 0 chr5 198128562 198128630 -4956902 - MIR SINE MIR -81 181 110 201 74 0 0 chr5 198129154 198129181 -4956351 + (CCCCCG)n Simple_repeat Simple_repeat 5 31 0 522 0 0 0 chr5 198129515 198129573 -4955959 + (TCCCC)n Simple_repeat Simple_repeat 1 58 0 251 387 89 0 chr5 198130498 198130666 -4954866 - MIR SINE MIR -35 227 45 273 299 61 5 chr5 198132105 198132215 -4953317 + MIR3 SINE MIR 42 161 -47 492 243 62 15 chr5 198132285 198132468 -4953064 + MIR SINE MIR 12 201 -61 180 176 0 0 chr5 198134363 198134397 -4951135 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 209 189 0 0 chr5 198135104 198135141 -4950391 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 998 120 0 6 chr5 198135806 198135973 -4949559 + (TTCC)n Simple_repeat Simple_repeat 4 169 0 2212 93 3 10 chr5 198137676 198137978 -4947554 - AluSx SINE Alu -12 300 1 181 281 49 37 chr5 198138715 198138797 -4946735 - MIR3 SINE MIR -111 97 15 1132 263 127 25 chr5 198138922 198139355 -4946177 - MLT1J LTR MaLR -2 509 33 1954 105 60 0 chr5 198139360 198139645 -4945887 + AluSx SINE Alu 9 310 -2 2298 60 27 7 chr5 198139646 198139944 -4945588 + AluY SINE Alu 1 304 -7 257 274 48 12 chr5 198140082 198140166 -4945366 + MIR SINE MIR 36 122 -140 1198 112 0 43 chr5 198140366 198140553 -4944979 + AluJo SINE Alu 9 187 -125 1872 159 0 7 chr5 198140571 198140873 -4944659 - AluJo SINE Alu -11 301 2 249 380 60 0 chr5 198141036 198141136 -4944396 - MIR SINE MIR -78 184 79 1054 278 96 44 chr5 198141316 198142262 -4943270 - L2 LINE L2 -29 3284 2272 1971 135 3 22 chr5 198143432 198143743 -4941789 + AluSx SINE Alu 7 311 -1 841 154 15 0 chr5 198144260 198144390 -4941142 - FLAM_C SINE Alu -1 132 1 275 244 133 11 chr5 198144392 198144482 -4941050 - MIR SINE MIR -63 145 45 1340 170 42 113 chr5 198144835 198144947 -4940585 + AluJb SINE Alu 1 119 -193 1737 174 0 7 chr5 198144947 198145252 -4940280 - AluSc SINE Alu -6 303 1 1340 170 42 113 chr5 198145252 198145297 -4940235 + AluJb SINE Alu 119 166 -146 2236 109 0 3 chr5 198145297 198145599 -4939933 + AluSx SINE Alu 1 301 -11 252 0 0 0 chr5 198145599 198145627 -4939905 + (TA)n Simple_repeat Simple_repeat 2 29 0 2256 97 7 0 chr5 198145629 198145927 -4939605 + AluSx SINE Alu 1 300 -12 1340 170 42 113 chr5 198145927 198146100 -4939432 + AluJb SINE Alu 166 312 0 460 83 0 0 chr5 198146182 198146242 -4939290 - Alu SINE Alu -249 60 1 288 152 0 0 chr5 198146283 198146329 -4939203 + L2 LINE L2 3221 3266 -6 404 266 57 0 chr5 198146528 198146652 -4938880 - Charlie8 DNA MER1_type -1898 519 389 340 331 63 6 chr5 198146707 198146882 -4938650 - Charlie8 DNA MER1_type -2219 198 14 274 341 121 27 chr5 198146885 198147216 -4938316 - L2 LINE L2 -1192 2122 1761 418 226 70 0 chr5 198147474 198147589 -4937943 - MIR SINE MIR -71 191 69 389 283 0 10 chr5 198147675 198147774 -4937758 + MIR SINE MIR 47 144 -64 2290 95 0 0 chr5 198147778 198148073 -4937459 + AluSx SINE Alu 1 295 -17 1210 221 58 41 chr5 198148869 198149118 -4936414 - MLT1K LTR MaLR -41 547 289 2220 94 0 3 chr5 198149118 198149441 -4936091 - AluSc SINE Alu 0 309 2 1210 221 58 41 chr5 198149441 198149535 -4935997 - MLT1K LTR MaLR -299 289 198 378 250 0 78 chr5 198149816 198149932 -4935600 + MIR SINE MIR 47 153 -109 * 537 270 32 32 chr5 198149923 198150112 -4935420 - MIR SINE MIR 0 262 74 234 259 0 0 chr5 198150351 198150409 -4935123 + GA-rich Low_complexity Low_complexity 4 61 0 256 262 36 48 chr5 198150426 198150510 -4935022 - MIR3 SINE MIR -47 161 79 289 330 31 0 chr5 198150811 198150908 -4934624 - L2 LINE L2 -1359 1955 1856 616 136 0 0 chr5 198151043 198151146 -4934386 + L1MC3 LINE L1 7681 7783 -2 283 314 39 0 chr5 198152630 198152783 -4932749 + (CTGGGG)n Simple_repeat Simple_repeat 1 159 0 222 284 42 0 chr5 198152787 198152882 -4932650 + (CCGGG)n Simple_repeat Simple_repeat 1 99 0 26 50 0 0 chr5 198152882 198152922 -4932610 + GC_rich Low_complexity Low_complexity 1 40 0 207 139 0 0 chr5 198152995 198153031 -4932501 + (TCCG)n Simple_repeat Simple_repeat 1 36 0 210 195 12 61 chr5 198153141 198153223 -4932309 + C-rich Low_complexity Low_complexity 1 78 0 31 104 0 0 chr5 198153286 198153401 -4932131 + GC_rich Low_complexity Low_complexity 1 115 0 24 32 0 0 chr5 198153640 198153671 -4931861 + GC_rich Low_complexity Low_complexity 1 31 0 367 288 0 43 chr5 198156505 198156644 -4928888 + CT-rich Low_complexity Low_complexity 3 135 0 205 344 135 0 chr5 198157883 198157979 -4927553 - MIR3 SINE MIR -22 186 78 2258 97 3 0 chr5 198160644 198160942 -4924590 - AluSx SINE Alu -13 299 1 1494 162 40 7 chr5 198160952 198161321 -4924211 - L1MB3 LINE L1 -7 6167 5760 2366 64 3 22 chr5 198161329 198161643 -4923889 - AluY SINE Alu -3 308 1 1673 81 9 0 chr5 198161644 198161855 -4923677 - AluSq SINE Alu -99 214 2 369 0 0 0 chr5 198161867 198161908 -4923624 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 999 79 0 0 chr5 198161908 198162034 -4923498 - AluSc SINE Alu -183 126 1 2398 90 0 0 chr5 198162037 198162347 -4923185 - AluSg SINE Alu 0 310 1 1955 86 0 4 chr5 198162355 198162647 -4922885 - AluSx SINE Alu 0 324 34 2310 61 20 3 chr5 198163176 198163469 -4922063 + AluY SINE Alu 1 298 -13 448 320 57 8 chr5 198164420 198164667 -4920865 - Charlie8 DNA MER1_type -2132 285 27 217 365 84 51 chr5 198164684 198164862 -4920670 - L2 LINE L2 -556 2758 2575 2783 7 0 0 chr5 198165115 198165422 -4920110 + AluYa5 SINE Alu 1 307 -4 1916 139 3 16 chr5 198165430 198165739 -4919793 + AluJb SINE Alu 1 305 -7 227 31 31 0 chr5 198166816 198166848 -4918684 + (TCC)n Simple_repeat Simple_repeat 1 33 0 237 33 0 0 chr5 198169811 198169841 -4915691 + (T)n Simple_repeat Simple_repeat 1 30 0 25 31 0 0 chr5 198170360 198170392 -4915140 + GC_rich Low_complexity Low_complexity 1 32 0 229 268 49 16 chr5 198171060 198171183 -4914349 + (CGTG)n Simple_repeat Simple_repeat 1 127 0 24 67 0 0 chr5 198171639 198171684 -4913848 + GC_rich Low_complexity Low_complexity 1 45 0 25 31 0 0 chr5 198171879 198171911 -4913621 + GC_rich Low_complexity Low_complexity 1 32 0 242 310 224 0 chr5 198172681 198172797 -4912735 - MIR SINE MIR -89 173 32 436 261 59 0 chr5 198173390 198173509 -4912023 - MIR SINE MIR -113 149 24 262 274 36 24 chr5 198173787 198173871 -4911661 - MIR SINE MIR -101 161 77 364 236 139 7 chr5 198174319 198174463 -4911069 - L1MDa LINE L1 -4020 2520 2358 267 229 0 29 chr5 198174503 198174573 -4910959 + MIR SINE MIR 83 150 -112 268 330 52 0 chr5 198175065 198175162 -4910370 - MIR SINE MIR -80 182 81 827 157 62 39 chr5 198175497 198175675 -4909857 - MER5A DNA MER1_type -7 182 1 203 397 66 0 chr5 198176902 198177038 -4908494 + MIR3 SINE MIR 3 147 -61 511 314 13 39 chr5 198177181 198177410 -4908122 + Charlie8 DNA MER1_type 1 223 -2194 192 125 0 0 chr5 198177659 198177691 -4907841 + (GGGA)n Simple_repeat Simple_repeat 2 33 0 646 221 23 41 chr5 198177888 198178082 -4907450 + MIR SINE MIR 44 237 -25 191 36 36 0 chr5 198179138 198179166 -4906366 + (AGGGGG)n Simple_repeat Simple_repeat 2 30 0 25 51 0 0 chr5 198179318 198179357 -4906175 + GC_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr5 198179519 198179558 -4905974 + GC_rich Low_complexity Low_complexity 1 39 0 785 154 0 0 chr5 198180444 198180567 -4904965 + AluSg/x SINE Alu 190 312 0 373 113 0 28 chr5 198180571 198180642 -4904890 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 528 296 110 63 chr5 198180652 198180969 -4904563 - MLT1K LTR MaLR -55 533 202 231 305 130 8 chr5 198181836 198181967 -4903565 + L2 LINE L2 3126 3272 0 3197 169 28 45 chr5 198186285 198186851 -4898681 + L1MB8 LINE L1 5547 6102 -76 2272 89 0 7 chr5 198186851 198187153 -4898379 - AluSq SINE Alu -13 300 1 3197 169 28 45 chr5 198187153 198187229 -4898303 + L1MB8 LINE L1 6102 6178 0 556 101 34 0 chr5 198187464 198187553 -4897979 + L1M4 LINE L1 5565 5656 -522 431 105 0 0 chr5 198187557 198187614 -4897918 + AluS SINE Alu 42 98 -215 828 288 113 50 chr5 198187760 198188027 -4897505 + L2 LINE L2 2844 3151 -162 2279 71 10 3 chr5 198188027 198188323 -4897209 - AluSp SINE Alu -15 298 1 828 288 113 50 chr5 198188323 198188496 -4897036 + L2 LINE L2 3151 3312 -1 274 304 0 22 chr5 198188750 198188842 -4896690 + MLT1K LTR MaLR 470 559 -29 2260 106 0 0 chr5 198189155 198189504 -4896028 + AluSx SINE Alu 1 349 0 210 143 0 0 chr5 198189504 198189539 -4895993 + (GGAGA)n Simple_repeat Simple_repeat 5 39 0 260 248 47 54 chr5 198189561 198189710 -4895822 + MLT1K LTR MaLR 333 480 -108 318 253 169 36 chr5 198190577 198190743 -4894789 - Charlie8 DNA MER1_type -2229 188 1 443 349 60 14 chr5 198190768 198190986 -4894546 - MIR SINE MIR -6 256 29 182 290 51 101 chr5 198191034 198191172 -4894360 + L2 LINE L2 3140 3270 -2 218 293 96 106 chr5 198191989 198192197 -4893335 - MIR SINE MIR -29 233 28 271 221 158 3 chr5 198194622 198194740 -4890792 - MIR SINE MIR -77 185 43 335 283 104 68 chr5 198196223 198196530 -4889002 - MER102b DNA MER1_type -14 327 10 193 244 174 12 chr5 198196676 198196762 -4888770 + MIR SINE MIR 37 136 -72 195 294 135 61 chr5 198197279 198197442 -4888090 - MIR SINE MIR -66 196 22 196 329 41 27 chr5 198197689 198197762 -4887770 - MIR3 SINE MIR -53 155 82 1951 97 47 4 chr5 198197765 198198043 -4887489 + AluSx SINE Alu 1 290 -22 270 298 58 41 chr5 198198510 198198631 -4886901 + MIR3 SINE MIR 48 170 -38 220 307 27 13 chr5 198198702 198198777 -4886755 + L2 LINE L2 3228 3303 -10 21 36 0 0 chr5 198199550 198199578 -4885954 + GC_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr5 198199641 198199679 -4885853 + GC_rich Low_complexity Low_complexity 1 38 0 231 61 0 0 chr5 198199710 198199743 -4885789 + (CTCGG)n Simple_repeat Simple_repeat 2 34 0 25 108 0 0 chr5 198199749 198199851 -4885681 + GC_rich Low_complexity Low_complexity 1 102 0 185 245 38 0 chr5 198200559 198200612 -4884920 - MIR SINE MIR -118 144 90 341 232 50 30 chr5 198200780 198200879 -4884653 - L2 LINE L2 0 3272 3172 645 315 171 5 chr5 198201025 198201400 -4884132 - L2 LINE L2 -344 2970 2534 1779 101 0 0 chr5 198201414 198201651 -4883881 + AluY SINE Alu 69 305 -6 377 313 58 74 chr5 198201758 198202084 -4883448 - L2 LINE L2 -338 2976 2656 2058 113 3 3 chr5 198202716 198203007 -4882525 + AluSx SINE Alu 1 291 -21 1937 137 3 3 chr5 198203090 198203382 -4882150 + AluSg SINE Alu 1 292 -18 658 129 0 3 chr5 198203425 198203657 -4881875 + AluSx SINE Alu 5 305 -7 593 211 78 20 chr5 198203662 198203866 -4881666 + L1MC4a LINE L1 5689 5904 -1904 1827 106 73 4 chr5 198203888 198204163 -4881369 + AluSx SINE Alu 1 294 -18 993 231 27 60 chr5 198204165 198204498 -4881034 - MLT1I LTR MaLR -7 402 81 2003 119 0 0 chr5 198204512 198204811 -4880721 + AluSx SINE Alu 6 304 0 1470 228 91 52 chr5 198204834 198205436 -4880096 + MLT1G LTR MaLR 1 586 -4 283 227 0 30 chr5 198205441 198205507 -4880025 - MLT1I LTR MaLR -345 64 1 257 203 34 17 chr5 198205680 198205739 -4879793 + L2 LINE L2 2699 2758 -556 2038 99 39 3 chr5 198205918 198206202 -4879330 - AluSq SINE Alu -18 295 2 2080 92 28 47 chr5 198206210 198206527 -4879005 - AluSx SINE Alu -1 311 1 2034 103 14 7 chr5 198206538 198206830 -4878702 - AluSx SINE Alu -18 294 1 534 147 132 23 chr5 198206833 198206962 -4878570 - FRAM SINE Alu -16 160 18 287 153 34 0 chr5 198207070 198207129 -4878403 + MLT1F1 LTR MaLR 507 567 0 449 121 12 72 chr5 198207160 198207268 -4878264 + AluJ/FRAM SINE Alu 214 312 0 584 150 8 63 chr5 198207274 198207401 -4878131 + FLAM_A SINE Alu 23 142 0 271 294 8 48 chr5 198207409 198207535 -4877997 + L2 LINE L2 2782 2902 -412 315 127 36 0 chr5 198207544 198207599 -4877933 - MER3 DNA MER1_type 0 209 153 2306 84 3 0 chr5 198207603 198207900 -4877632 + AluSq SINE Alu 1 298 -15 2194 107 10 0 chr5 198208069 198208369 -4877163 + AluSg SINE Alu 1 303 -7 293 370 76 13 chr5 198208616 198208840 -4876692 - MIR SINE MIR -17 245 8 216 0 0 0 chr5 198208904 198208928 -4876604 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 894 251 44 100 chr5 198208962 198209112 -4876420 - MLT1K LTR MaLR -1 587 430 2237 88 0 31 chr5 198209112 198209431 -4876101 - AluSc SINE Alu 0 309 1 894 251 44 100 chr5 198209431 198209463 -4876069 - MLT1K LTR MaLR -158 430 398 2114 113 10 7 chr5 198209463 198209764 -4875768 - AluSx SINE Alu -9 303 2 894 251 44 100 chr5 198209764 198209970 -4875562 - MLT1K LTR MaLR -190 398 220 1098 165 0 0 chr5 198209970 198210140 -4875392 - AluSg/x SINE Alu -11 299 130 430 327 51 23 chr5 198210140 198210357 -4875175 - MLT1K LTR MaLR -363 225 3 1411 169 3 53 chr5 198210469 198210789 -4874743 + AluJb SINE Alu 1 304 -8 323 213 21 53 chr5 198210850 198210944 -4874588 - LTR67 LTR ERVL -10 547 457 882 290 79 13 chr5 198211144 198211523 -4874009 + MLT1L LTR MaLR 141 544 -71 2058 118 0 13 chr5 198211791 198212104 -4873428 + AluSg SINE Alu 1 309 -1 732 220 0 0 chr5 198212463 198212595 -4872937 + FLAM_A SINE Alu 1 132 -1 1109 263 74 76 chr5 198212847 198212931 -4872601 - MLT1K LTR MaLR 0 588 505 1675 181 3 13 chr5 198212931 198213230 -4872302 - AluJb SINE Alu -16 296 1 1109 263 74 76 chr5 198213230 198213305 -4872227 - MLT1K LTR MaLR -83 505 431 2054 214 120 40 chr5 198213305 198213681 -4871851 - MLT1F LTR MaLR -1 541 114 2020 110 20 10 chr5 198213681 198213973 -4871559 - AluSx SINE Alu -17 295 1 2054 214 120 40 chr5 198213973 198214097 -4871435 - MLT1F LTR MaLR -428 114 1 1109 263 74 76 chr5 198214097 198214503 -4871029 - MLT1K LTR MaLR -157 431 23 952 164 24 34 chr5 198214606 198214769 -4870763 + MLT1E3 LTR MaLR 1 163 -461 2408 79 0 0 chr5 198214769 198215072 -4870460 + AluY SINE Alu 1 303 -8 952 164 24 34 chr5 198215072 198215115 -4870417 + MLT1E3 LTR MaLR 163 205 -419 2615 42 0 0 chr5 198215123 198215434 -4870098 + AluY SINE Alu 1 311 0 283 239 0 0 chr5 198215441 198215508 -4870024 + MLT1L LTR MaLR 558 624 0 694 317 74 0 chr5 198216687 198216917 -4868615 + MIR SINE MIR 16 262 0 2190 115 0 0 chr5 198217022 198217317 -4868215 + AluSg SINE Alu 2 296 -14 2027 86 3 23 chr5 198217576 198217879 -4867653 - AluSx SINE Alu -15 297 1 523 227 15 15 chr5 198320664 198320796 -4764736 + MER94 DNA DNA 3 134 0 1427 189 23 4 chr5 198321035 198321299 -4764233 - AluJb SINE Alu -18 294 26 2200 58 3 74 chr5 198321342 198321700 -4763832 + AluY SINE Alu 1 311 0 717 198 6 79 chr5 198321754 198321931 -4763601 - AluJo SINE Alu -142 170 7 804 272 53 37 chr5 198322132 198322378 -4763154 + MIR SINE MIR 8 257 -5 675 168 38 23 chr5 198323548 198323679 -4761853 - FLAM_C SINE Alu 0 133 1 1943 151 10 0 chr5 198323690 198323981 -4761551 - AluSx SINE Alu -18 294 1 2242 125 3 0 chr5 198324859 198325171 -4760361 + AluSq SINE Alu 1 313 0 2238 112 0 13 chr5 198325191 198325503 -4760029 + AluSc SINE Alu 1 308 -1 923 220 10 82 chr5 198325894 198326198 -4759334 - AluJb SINE Alu -30 282 1 368 259 157 65 chr5 198326250 198326466 -4759066 + L3 LINE CR1 907 1142 -435 2107 129 3 3 chr5 198327139 198327433 -4758099 + AluSp SINE Alu 5 298 -15 1893 110 0 55 chr5 198327630 198327922 -4757610 + AluSx SINE Alu 1 276 -36 222 37 0 0 chr5 198327922 198327949 -4757583 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2044 130 0 3 chr5 198328299 198328625 -4756907 + AluSp SINE Alu 1 325 0 210 71 0 0 chr5 198329038 198329066 -4756466 + (CA)n Simple_repeat Simple_repeat 1 28 0 2053 115 0 39 chr5 198329613 198329925 -4755607 - AluSx SINE Alu -12 300 1 232 220 151 0 chr5 198329937 198330069 -4755463 + L1 LINE L1 4901 5059 -1087 1439 160 17 59 chr5 198330120 198330407 -4755125 - AluJo SINE Alu -29 283 9 2474 58 0 0 chr5 198330413 198330708 -4754824 - AluY SINE Alu -16 295 1 596 182 0 0 chr5 198330810 198330909 -4754623 + AluSg/x SINE Alu 198 296 -13 331 178 122 0 chr5 198332215 198332305 -4753227 - MIR SINE MIR -109 153 53 1556 153 24 53 chr5 198332976 198333307 -4752225 + L1MB3 LINE L1 5811 6131 -52 2403 91 0 3 chr5 198333307 198333615 -4751917 + AluY SINE Alu 1 307 -4 1556 153 24 53 chr5 198333615 198333663 -4751869 + L1MB3 LINE L1 6131 6179 -4 315 264 100 84 chr5 198333774 198333998 -4751534 + L1MC5 LINE L1 7003 7222 -739 1638 164 26 39 chr5 198333998 198334303 -4751229 + AluJb SINE Alu 1 301 -11 315 264 100 84 chr5 198334303 198334835 -4750697 + L1MC5 LINE L1 7222 7775 -186 317 239 97 26 chr5 198334863 198334976 -4750556 - L1ME4a LINE L1 -178 5943 5823 215 288 164 0 chr5 198335016 198335089 -4750443 - L2 LINE L2 0 3272 3188 9026 129 52 13 chr5 198335696 198336402 -4749130 - Tigger4(Zombi) DNA MER2_type 0 2731 2054 2013 134 3 7 chr5 198336402 198336708 -4748824 - AluSx SINE Alu -7 305 1 9026 129 52 13 chr5 198336708 198337514 -4748018 - Tigger4(Zombi) DNA MER2_type -677 2054 1160 1234 145 22 44 chr5 198337532 198337760 -4747772 + AluSg/x SINE Alu 71 293 -19 1439 193 51 24 chr5 198337772 198338068 -4747464 + AluJb SINE Alu 1 304 -8 942 130 0 56 chr5 198338068 198338230 -4747302 - Tigger4(Zombi) DNA MER2_type -1562 1169 1017 * 2792 190 50 23 chr5 198338212 198338775 -4746757 - Tigger4(Zombi) DNA MER2_type -2153 578 1 1164 213 8 4 chr5 198338981 198339234 -4746298 + AluJo SINE Alu 40 293 -19 1678 131 33 0 chr5 198339425 198339670 -4745862 + AluSx SINE Alu 5 257 -55 1880 155 3 0 chr5 198339756 198340040 -4745492 + AluJo SINE Alu 1 285 -27 2054 139 0 3 chr5 198340295 198340597 -4744935 - AluSx SINE Alu -11 301 1 361 148 0 0 chr5 198340782 198340836 -4744696 + MER58B DNA MER1_type 264 317 -24 816 133 0 0 chr5 198340896 198341024 -4744508 + AluSg/x SINE Alu 178 305 -7 2154 139 0 0 chr5 198341101 198341404 -4744128 + AluSx SINE Alu 5 307 -5 196 226 57 0 chr5 198341523 198341576 -4743956 - MIR SINE MIR -58 150 95 1157 281 33 22 chr5 198341925 198342380 -4743152 + L1MB8 LINE L1 5718 6177 -1 491 166 0 2 chr5 198342624 198342891 -4742641 + AluSx SINE Alu 1 310 0 758 201 0 55 chr5 198342897 198343061 -4742471 - MER44D DNA MER2_type -184 425 1 228 230 115 35 chr5 198343061 198343174 -4742358 + L1MC5 LINE L1 7360 7481 -480 1007 167 12 0 chr5 198343180 198343342 -4742190 - AluSp SINE Alu -16 297 134 32 20 0 20 chr5 198343371 198343401 -4742131 + AT_rich Low_complexity Low_complexity 1 31 -18 1848 110 51 4 chr5 198343401 198343674 -4741858 + AluSx SINE Alu 1 286 -26 32 20 0 20 chr5 198343674 198343693 -4741839 + AT_rich Low_complexity Low_complexity 31 49 0 371 244 125 6 chr5 198343955 198344131 -4741401 - L1MC5 LINE L1 -107 7854 7658 563 216 30 45 chr5 198344522 198344656 -4740876 + FLAM_A SINE Alu 1 132 -1 417 253 153 23 chr5 198344662 198344806 -4740726 + L1MC4a LINE L1 5636 5760 -2048 1809 156 42 0 chr5 198344806 198345094 -4740438 + AluJb SINE Alu 1 300 -12 417 253 153 23 chr5 198345094 198345210 -4740322 + L1MC4a LINE L1 5760 5930 -1878 23 54 0 0 chr5 198345365 198345402 -4740130 + AT_rich Low_complexity Low_complexity 1 37 0 2181 107 17 3 chr5 198345698 198345996 -4739536 + AluSx SINE Alu 1 302 -10 2465 247 88 69 chr5 198346010 198347131 -4738401 + L1M4 LINE L1 3663 4810 -1336 1930 139 0 27 chr5 198347131 198347432 -4738100 - AluSx SINE Alu -11 301 9 2465 247 88 69 chr5 198347432 198347531 -4738001 + L1M4 LINE L1 4810 4906 -1240 2148 122 0 3 chr5 198347556 198347851 -4737681 - AluSx SINE Alu -18 294 1 1164 148 5 25 chr5 198347872 198348074 -4737458 + AluSg/x SINE Alu 114 311 -1 1656 233 60 32 chr5 198348084 198348801 -4736731 + L1M4 LINE L1 4921 5665 -513 1416 154 0 0 chr5 198348801 198349021 -4736511 + AluSg/x SINE Alu 90 309 -3 2007 143 3 10 chr5 198349030 198349344 -4736188 + AluSx SINE Alu 1 312 0 1954 128 21 17 chr5 198349372 198349660 -4735872 + AluSg SINE Alu 1 289 -21 721 267 32 4 chr5 198349674 198349951 -4735581 + L1MB1 LINE L1 2101 2385 -3999 1750 145 3 30 chr5 198349972 198350268 -4735264 + AluSx SINE Alu 5 292 -20 1828 173 7 10 chr5 198350270 198350577 -4734955 + AluSx SINE Alu 1 306 -6 2448 251 79 33 chr5 198350577 198351169 -4734363 + L1MB1 LINE L1 2373 2936 -3446 2009 138 10 0 chr5 198351169 198351458 -4734074 - AluSx SINE Alu -20 292 1 2448 251 79 33 chr5 198351458 198351656 -4733876 + L1MB1 LINE L1 2936 3123 -3259 2311 81 3 0 chr5 198351656 198351954 -4733578 + AluY SINE Alu 1 299 -12 2448 251 79 33 chr5 198351954 198352156 -4733376 + L1MB1 LINE L1 3123 3414 -2968 781 186 0 164 chr5 198352131 198352272 -4733260 + L1MB1 LINE L1 3923 3971 -2411 * 2261 70 7 13 chr5 198352272 198352573 -4732959 + AluY SINE Alu 1 299 -12 781 186 0 164 chr5 198352573 198352791 -4732741 + L1MB1 LINE L1 3971 4223 -2159 854 173 0 15 chr5 198352793 198352926 -4732606 + AluJo/FLAM SINE Alu 2 132 -180 1347 223 14 4 chr5 198352928 198353206 -4732326 + AluJb SINE Alu 1 281 -31 2003 89 7 7 chr5 198353207 198353477 -4732055 + AluSq SINE Alu 35 304 -9 3068 210 66 67 chr5 198353509 198354320 -4731212 + L1MB1 LINE L1 4211 5060 -1322 856 113 7 67 chr5 198354320 198354470 -4731062 + FLAM_C SINE Alu 1 141 -2 3068 210 66 67 chr5 198354470 198354979 -4730553 + L1MB1 LINE L1 5060 5568 -814 1669 169 7 14 chr5 198354984 198355268 -4730264 + AluJo SINE Alu 7 288 -24 2555 173 20 72 chr5 198355291 198355348 -4730184 + L1MB1 LINE L1 5784 5842 -562 1384 141 184 16 chr5 198355348 198355604 -4729928 + AluSg1 SINE Alu 1 299 -10 2555 173 20 72 chr5 198355604 198355668 -4729864 + L1MB1 LINE L1 5842 5908 -496 2181 116 14 0 chr5 198355668 198355961 -4729571 + AluSq SINE Alu 3 299 -14 2555 173 20 72 chr5 198355961 198356141 -4729391 + L1MB1 LINE L1 5908 6096 -308 1864 105 0 108 chr5 198356141 198356473 -4729059 + AluSg1 SINE Alu 1 296 -13 2555 173 20 72 chr5 198356473 198356770 -4728762 + L1MB1 LINE L1 6096 6353 -51 2213 94 0 50 chr5 198356775 198357093 -4728439 - AluSx SINE Alu -10 302 1 330 111 0 0 chr5 198357118 198357172 -4728360 + Alu SINE Alu 247 300 -2 1239 223 79 9 chr5 198357188 198357372 -4728160 + L1MB7 LINE L1 5799 5969 -215 2493 55 0 13 chr5 198357372 198357679 -4727853 + AluY SINE Alu 1 303 -8 1239 223 79 9 chr5 198357679 198357852 -4727680 + L1MB7 LINE L1 5969 6175 -9 919 117 97 0 chr5 198358214 198358359 -4727173 + AluSq SINE Alu 1 159 -154 745 130 0 32 chr5 198358530 198358653 -4726879 + FLAM_C SINE Alu 25 143 0 270 116 0 0 chr5 198358654 198358697 -4726835 + (GA)n Simple_repeat Simple_repeat 2 44 0 2338 105 0 3 chr5 198361584 198361897 -4723635 - AluSx SINE Alu 0 312 1 1662 134 63 0 chr5 198362148 198362417 -4723115 + AluSx SINE Alu 1 286 -26 234 0 0 0 chr5 198362417 198362443 -4723089 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 836 168 0 0 chr5 198362490 198362627 -4722905 + AluSg/x SINE Alu 174 310 0 180 111 0 0 chr5 198362636 198362663 -4722869 + (A)n Simple_repeat Simple_repeat 1 27 0 1388 210 40 13 chr5 198363080 198363203 -4722329 + AluJb SINE Alu 2 120 -192 285 29 0 0 chr5 198363203 198363237 -4722295 + (CA)n Simple_repeat Simple_repeat 2 35 0 1388 210 40 13 chr5 198363237 198363413 -4722119 + AluJb SINE Alu 120 309 -3 654 138 114 32 chr5 198363413 198363536 -4721996 + FLAM_C SINE Alu 1 133 0 25 0 0 0 chr5 198363536 198363561 -4721971 + AT_rich Low_complexity Low_complexity 1 25 0 2251 89 0 0 chr5 198363561 198363883 -4721649 + AluY SINE Alu 1 322 0 2219 97 0 35 chr5 198363895 198364206 -4721326 + AluSx SINE Alu 1 300 -12 206 340 87 0 chr5 198364529 198364632 -4720900 - MIR SINE MIR -49 213 102 1181 221 19 45 chr5 198364709 198364843 -4720689 + AluJb SINE Alu 7 143 -169 2146 152 0 0 chr5 198364843 198365153 -4720379 + AluSx SINE Alu 1 310 -2 1181 221 19 45 chr5 198365153 198365326 -4720206 + AluJb SINE Alu 143 306 -6 956 183 35 9 chr5 198365398 198365628 -4719904 + L1MB2 LINE L1 5936 6171 0 2041 123 4 0 chr5 198365811 198366088 -4719444 + AluSx SINE Alu 5 282 -30 186 71 0 0 chr5 198366091 198366119 -4719413 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 210 37 0 0 chr5 198366337 198366364 -4719168 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1719 164 58 0 chr5 198366505 198366780 -4718752 + AluSx SINE Alu 1 291 -21 1554 206 3 0 chr5 198368464 198368767 -4716765 + AluJo SINE Alu 1 304 0 2347 93 0 3 chr5 198368958 198369258 -4716274 - AluSp SINE Alu -14 299 1 2111 118 7 3 chr5 198369284 198369581 -4715951 + AluSx SINE Alu 1 298 -14 1087 101 0 0 chr5 198369794 198369943 -4715589 + AluSg/x SINE Alu 161 309 -3 1934 122 44 14 chr5 198369957 198370252 -4715280 + AluSq SINE Alu 1 304 -9 1810 173 70 40 chr5 198370255 198370684 -4714848 + L1MB3 LINE L1 5678 6119 -64 310 173 0 49 chr5 198370685 198370766 -4714766 + AluSc SINE Alu 114 190 -109 1696 116 28 63 chr5 198370766 198371050 -4714482 + AluSx SINE Alu 32 305 -7 2031 109 11 0 chr5 198371249 198371564 -4713968 + AluSc SINE Alu 1 318 0 1639 188 3 3 chr5 198371586 198371879 -4713653 + AluJo SINE Alu 1 293 -19 1418 139 112 4 chr5 198371882 198372133 -4713399 - MER47A DNA MER2_type -64 302 25 549 183 30 92 chr5 198372148 198372312 -4713220 + L1MB7 LINE L1 5923 6076 -108 397 255 19 19 chr5 198372450 198372556 -4712976 + MLT1A2 LTR MaLR 1 106 -268 600 283 25 20 chr5 198372620 198372818 -4712714 + MLT1A2 LTR MaLR 114 312 -62 1739 165 0 53 chr5 198372818 198373121 -4712411 + AluJb SINE Alu 1 287 -25 24 53 0 0 chr5 198373127 198373165 -4712367 + AT_rich Low_complexity Low_complexity 1 38 0 1125 156 139 64 chr5 198373378 198373507 -4712025 + MER44D DNA MER2_type 1 119 -2372 2266 88 0 0 chr5 198373507 198373803 -4711729 - AluY SINE Alu -15 296 1 1125 156 139 64 chr5 198373803 198373844 -4711688 + MER44D DNA MER2_type 119 156 -2335 2044 143 3 10 chr5 198373844 198374158 -4711374 - AluSx SINE Alu 0 312 1 1125 156 139 64 chr5 198374158 198374281 -4711251 + MER44D DNA MER2_type 156 587 -22 266 338 39 32 chr5 198375071 198375225 -4710307 + L2 LINE L2 3155 3309 -4 1568 190 0 7 chr5 198375266 198375545 -4709987 + AluJb SINE Alu 1 277 -35 840 152 0 38 chr5 198375703 198375835 -4709697 - FLAM_C SINE Alu -6 127 1 2127 130 0 0 chr5 198375865 198376157 -4709375 - AluSx SINE Alu -18 294 3 1222 84 0 0 chr5 198376186 198376341 -4709191 + AluY SINE Alu 152 306 -5 207 0 0 0 chr5 198376433 198376456 -4709076 + (A)n Simple_repeat Simple_repeat 1 23 0 1270 209 0 73 chr5 198376458 198376773 -4708759 + AluJb SINE Alu 6 297 -15 36 53 0 0 chr5 198376901 198376958 -4708574 + AT_rich Low_complexity Low_complexity 1 57 0 2133 101 3 11 chr5 198376959 198377270 -4708262 + AluSx SINE Alu 1 309 0 1117 82 0 0 chr5 198377459 198377594 -4707938 + AluSq/x SINE Alu 1 135 -178 2177 95 0 7 chr5 198377594 198377897 -4707635 + AluY SINE Alu 1 301 0 21 57 0 0 chr5 198378008 198378043 -4707489 + AT_rich Low_complexity Low_complexity 1 35 0 2244 100 0 31 chr5 198378205 198378341 -4707191 + AluSq SINE Alu 1 140 -173 2271 103 6 6 chr5 198378341 198378652 -4706880 + AluSp SINE Alu 1 311 -2 2244 100 0 31 chr5 198378652 198378834 -4706698 + AluSq SINE Alu 140 309 -4 21 0 0 0 chr5 198378929 198378950 -4706582 + AT_rich Low_complexity Low_complexity 1 21 0 302 151 57 0 chr5 198379620 198379673 -4705859 + AluSp SINE Alu 117 172 -131 2131 92 33 13 chr5 198379766 198380069 -4705463 + AluSx SINE Alu 1 309 -3 2502 48 7 0 chr5 198380069 198380362 -4705170 + AluY SINE Alu 1 295 -16 1997 143 0 31 chr5 198380446 198380768 -4704764 + AluSx SINE Alu 1 312 0 1587 180 14 10 chr5 198380778 198381067 -4704465 + AluJo SINE Alu 1 290 -22 30 59 0 0 chr5 198381218 198381269 -4704263 + AT_rich Low_complexity Low_complexity 1 51 0 347 286 0 31 chr5 198381400 198381498 -4704034 - MIR SINE MIR -162 100 6 230 296 122 0 chr5 198381747 198381845 -4703687 + MIR SINE MIR 59 168 -94 844 231 85 0 chr5 198381974 198382173 -4703359 - AluJb SINE Alu -11 301 86 291 213 222 28 chr5 198382249 198382357 -4703175 + AluSp SINE Alu 8 136 -167 1286 224 139 13 chr5 198383161 198383536 -4701996 + MLT1C LTR MaLR 46 467 0 360 255 106 0 chr5 198383536 198383630 -4701902 - MIR SINE MIR -60 202 99 2354 109 0 0 chr5 198383631 198383935 -4701597 + AluSx SINE Alu 1 304 -8 355 143 0 0 chr5 198384104 198384160 -4701372 - AluJo SINE Alu -10 291 236 806 189 138 0 chr5 198384166 198384325 -4701207 - AluJo SINE Alu -127 185 5 950 211 0 0 chr5 198384726 198384897 -4700635 - AluJb SINE Alu -11 301 131 588 70 79 5 chr5 198384899 198385202 -4700330 + (TA)n Simple_repeat Simple_repeat 1 325 0 1226 199 76 25 chr5 198385347 198385528 -4700004 - AluJb SINE Alu -1 311 110 2556 61 0 0 chr5 198385528 198385825 -4699707 - AluY SINE Alu -14 297 1 1226 199 76 25 chr5 198385825 198385919 -4699613 - AluJb SINE Alu -202 110 22 2111 121 3 3 chr5 198385969 198386266 -4699266 + AluSq SINE Alu 1 297 -16 1537 61 92 0 chr5 198386266 198386462 -4699070 + AluSc SINE Alu 83 296 -13 1607 181 55 10 chr5 198386673 198386965 -4698567 + AluJo SINE Alu 1 305 -7 886 179 93 0 chr5 198387542 198387693 -4697839 + FAM SINE Alu 5 169 -6 2455 82 0 0 chr5 198388014 198388320 -4697212 - AluSg1 SINE Alu -3 306 1 2173 136 3 0 chr5 198388320 198388629 -4696903 - AluSx SINE Alu -1 311 2 2184 122 3 0 chr5 198388831 198389134 -4696398 - AluSx SINE Alu -8 304 1 29 0 0 0 chr5 198389298 198389327 -4696205 + AT_rich Low_complexity Low_complexity 1 29 0 2186 120 0 0 chr5 198390329 198390620 -4694912 - AluSg SINE Alu -19 291 1 2093 94 27 13 chr5 198390784 198391082 -4694450 - AluSx SINE Alu -10 302 1 675 185 79 28 chr5 198391212 198391390 -4694142 - AluJo SINE Alu -6 306 120 2293 106 3 13 chr5 198391798 198392101 -4693431 + AluSx SINE Alu 1 300 -12 1338 181 4 20 chr5 198392280 198392529 -4693003 - AluJo SINE Alu -13 299 55 451 148 36 161 chr5 198392560 198392630 -4692902 - L1MD1 LINE L1 0 6359 6282 2438 74 17 0 chr5 198392630 198392927 -4692605 + AluSp SINE Alu 1 302 -11 451 148 36 161 chr5 198392927 198392943 -4692589 - L1MD1 LINE L1 -77 6282 6266 821 189 65 13 chr5 198392943 198393096 -4692436 + FRAM SINE Alu 1 161 -5 451 148 36 161 chr5 198393096 198393205 -4692327 - L1MD1 LINE L1 -93 6266 6084 2196 114 0 0 chr5 198393206 198393504 -4692028 - AluSg SINE Alu -12 298 1 2743 198 15 98 chr5 198393612 198393723 -4691809 - L1MD2 LINE L1 -182 6177 6058 2220 110 0 10 chr5 198393723 198394022 -4691510 + AluSx SINE Alu 2 297 -15 2743 198 15 98 chr5 198394022 198394113 -4691419 - L1MD2 LINE L1 -301 6058 5961 1695 167 3 7 chr5 198394113 198394406 -4691126 - AluJb SINE Alu -20 292 1 2743 198 15 98 chr5 198394406 198394583 -4690949 - L1MD2 LINE L1 -398 5961 5771 2353 108 0 0 chr5 198394583 198394889 -4690643 - AluSq SINE Alu -7 306 1 2743 198 15 98 chr5 198394889 198395119 -4690413 - L1MD2 LINE L1 -588 5771 5524 2118 124 0 0 chr5 198395119 198395417 -4690115 - AluSq SINE Alu -15 298 1 2743 198 15 98 chr5 198395417 198395429 -4690103 - L1MD2 LINE L1 -835 5524 5513 2251 95 7 3 chr5 198395429 198395725 -4689807 - AluSx SINE Alu -15 297 1 2743 198 15 98 chr5 198395725 198395814 -4689718 - L1MD2 LINE L1 -846 5513 5534 2273 109 3 3 chr5 198395814 198396118 -4689414 - AluSx SINE Alu -8 304 1 2743 198 15 98 chr5 198396118 198396210 -4689322 - L1MD2 LINE L1 -824 5535 5437 1978 122 0 4 chr5 198396219 198396497 -4689035 - AluSq SINE Alu -14 299 23 1997 159 9 18 chr5 198396547 198396886 -4688646 - MER1B DNA MER1_type -1 336 1 1164 148 11 6 chr5 198396932 198397115 -4688417 - AluSg/x SINE Alu -6 304 121 2050 116 13 7 chr5 198397119 198397429 -4688103 - AluSx SINE Alu 0 312 1 1962 104 7 28 chr5 198398095 198398382 -4687150 + AluSx SINE Alu 1 281 -31 2382 90 0 0 chr5 198398382 198398682 -4686850 - AluSp SINE Alu -6 307 7 1739 160 0 50 chr5 198398688 198398860 -4686672 - AluJb SINE Alu -9 303 153 2410 77 7 0 chr5 198398860 198399159 -4686373 - AluY SINE Alu -10 301 1 1739 160 0 50 chr5 198399159 198399305 -4686227 - AluJb SINE Alu -159 153 1 456 77 0 0 chr5 198399311 198399376 -4686156 + (TATG)n Simple_repeat Simple_repeat 2 66 0 1711 137 6 89 chr5 198399377 198399473 -4686059 - AluSx SINE Alu -19 293 191 2031 72 90 38 chr5 198399473 198399763 -4685769 - AluY SINE Alu -6 305 1 1711 137 6 89 chr5 198399763 198399981 -4685551 - AluSx SINE Alu -121 191 5 22 0 0 0 chr5 198400208 198400230 -4685302 + AT_rich Low_complexity Low_complexity 1 22 0 1637 195 164 17 chr5 198400891 198401362 -4684170 - MLT1F LTR MaLR -2 540 1 2290 100 0 7 chr5 198401684 198401994 -4683538 - AluSx SINE Alu -3 309 2 2018 130 7 0 chr5 198401996 198402288 -4683244 - AluSx SINE Alu -18 294 1 284 177 0 48 chr5 198402288 198402350 -4683182 - AluSg/x SINE Alu -166 134 76 1273 174 0 5 chr5 198402350 198402557 -4682975 - AluSx SINE Alu -100 212 7 189 0 0 0 chr5 198402561 198402582 -4682950 + (T)n Simple_repeat Simple_repeat 1 21 0 1918 125 6 64 chr5 198402675 198403004 -4682528 - AluSx SINE Alu -2 310 1 2204 112 0 0 chr5 198403174 198403470 -4682062 - AluSc SINE Alu -5 304 9 636 186 0 16 chr5 198403537 198403661 -4681871 + FLAM_C SINE Alu 6 127 -16 1082 123 293 14 chr5 198403758 198403995 -4681537 + AluSg1 SINE Alu 9 304 0 183 80 0 0 chr5 198404027 198404052 -4681480 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2193 115 7 0 chr5 198404085 198404380 -4681152 + AluSp SINE Alu 1 297 -16 246 119 8 15 chr5 198404415 198404659 -4680873 + AluSx SINE Alu 1 297 -3 2663 198 30 29 chr5 198404679 198405237 -4680295 - L1MB7 LINE L1 -93 6091 5535 818 9 0 35 chr5 198405237 198405352 -4680180 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 2039 116 4 0 chr5 198405355 198405631 -4679901 - AluSx SINE Alu -33 279 3 2663 198 30 29 chr5 198405631 198405690 -4679842 - L1MB7 LINE L1 -650 5534 5469 900 170 0 0 chr5 198405690 198405831 -4679701 + AluSg/x SINE Alu 154 294 -16 275 75 25 0 chr5 198405833 198405873 -4679659 - MADE1 DNA Mariner -39 41 1 485 167 0 9 chr5 198405934 198406042 -4679490 + (TA)n Simple_repeat Simple_repeat 1 107 0 1008 142 13 0 chr5 198406053 198406208 -4679324 - AluSg/x SINE Alu -29 283 127 1765 176 7 16 chr5 198406243 198406577 -4678955 - AluSx SINE Alu 0 312 1 2315 81 24 0 chr5 198406587 198406882 -4678650 - AluSp SINE Alu -11 302 1 1996 138 3 7 chr5 198406889 198407185 -4678347 - AluSx SINE Alu -17 295 1 294 140 0 0 chr5 198407197 198407247 -4678285 - L1M4 LINE L1 -2458 3688 3639 1998 133 19 7 chr5 198407289 198407597 -4677935 - AluSx SINE Alu 0 312 1 1439 133 5 5 chr5 198407837 198408047 -4677485 - AluSx SINE Alu -86 226 17 1574 180 32 0 chr5 198408096 198408380 -4677152 + AluJo SINE Alu 1 293 -19 500 146 0 45 chr5 198408488 198408577 -4676955 - FLAM SINE Alu -16 127 43 1436 130 161 8 chr5 198408675 198408936 -4676596 - AluSx SINE Alu -2 310 10 2124 128 0 0 chr5 198409010 198409307 -4676225 + AluSx SINE Alu 1 297 -15 225 0 0 0 chr5 198409387 198409412 -4676120 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1413 183 68 15 chr5 198409417 198409680 -4675852 - AluSx SINE Alu -35 277 1 1476 161 62 11 chr5 198409689 198409963 -4675569 - AluJb SINE Alu -24 288 1 396 190 0 38 chr5 198409963 198410042 -4675490 - AluJo SINE Alu -157 145 70 2483 81 0 0 chr5 198410141 198410439 -4675093 - AluSg SINE Alu -12 298 1 427 262 109 33 chr5 198410688 198410871 -4674661 - MIR SINE MIR -35 227 31 2362 95 0 3 chr5 198411148 198411454 -4674078 - AluSx SINE Alu -5 307 3 2175 109 3 13 chr5 198411659 198411961 -4673571 + AluSq SINE Alu 1 299 -14 825 149 8 0 chr5 198411996 198412117 -4673415 + AluJb SINE Alu 13 134 -178 1660 159 78 0 chr5 198412168 198412451 -4673081 - AluSx SINE Alu -7 305 1 654 202 52 167 chr5 198412451 198412590 -4672942 - L1M4 LINE L1 -814 5332 5179 1188 195 82 48 chr5 198412590 198412769 -4672763 - AluJo SINE Alu 0 302 108 198 0 0 0 chr5 198412769 198412791 -4672741 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1188 195 82 48 chr5 198412791 198412903 -4672629 - AluJo SINE Alu -194 108 1 2414 76 0 17 chr5 198412910 198413212 -4672320 - AluSg SINE Alu -13 297 1 654 202 52 167 chr5 198413212 198413265 -4672267 - L1M4 LINE L1 -973 5173 5116 1686 185 10 0 chr5 198413265 198413557 -4671975 + AluJb SINE Alu 1 295 -17 654 202 52 167 chr5 198413557 198413743 -4671789 - L1M4 LINE L1 -1030 5116 5016 1952 112 24 20 chr5 198413743 198414039 -4671493 - AluSx SINE Alu -9 303 7 654 202 52 167 chr5 198414039 198414164 -4671368 - L1M4 LINE L1 -1130 5016 4878 443 219 93 49 chr5 198414192 198414254 -4671278 - L1M4 LINE L1 -1239 4907 4849 2407 71 7 3 chr5 198414254 198414549 -4670983 + AluSp SINE Alu 1 296 -17 443 219 93 49 chr5 198414549 198414691 -4670841 - L1M4 LINE L1 -1297 4849 4694 228 273 0 0 chr5 198414696 198414751 -4670781 + Tigger5 DNA MER2_type 1 55 -2268 * 276 143 86 14 chr5 198414720 198414790 -4670742 + Tigger5 DNA MER2_type 2249 2323 0 508 122 0 14 chr5 198414803 198414877 -4670655 + Tigger5 DNA MER2_type 2251 2323 0 952 199 20 28 chr5 198414975 198415226 -4670306 - L1M4 LINE L1 -1487 4659 4411 488 191 0 0 chr5 198415294 198415378 -4670154 + Tigger5 DNA MER2_type 2239 2322 -1 2297 113 0 3 chr5 198415451 198415761 -4669771 - AluSx SINE Alu -3 309 1 7812 95 52 5 chr5 198415761 198416868 -4668664 - HSMAR1 DNA Mariner -129 1158 1 292 209 45 9 chr5 198416868 198416978 -4668554 - L1M4 LINE L1 -2177 3969 3856 2520 38 0 10 chr5 198416980 198417272 -4668260 - AluY SINE Alu -22 289 1 2370 72 3 16 chr5 198417347 198417653 -4667879 - AluSx SINE Alu -10 302 1 786 217 103 29 chr5 198417660 198417941 -4667591 - L1MB4 LINE L1 0 6180 5879 900 211 98 25 chr5 198418029 198418041 -4667491 - L1MB7 LINE L1 -145 6039 6029 2060 88 50 0 chr5 198418041 198418324 -4667208 + AluSc SINE Alu 1 297 -12 900 211 98 25 chr5 198418324 198418586 -4666946 - L1MB7 LINE L1 -155 6029 5745 * 1934 183 78 20 chr5 198418582 198419020 -4666512 - L1MB4 LINE L1 -131 6049 5587 428 200 12 35 chr5 198419226 198419311 -4666221 + AluJ/FLAM SINE Alu 3 85 -217 860 214 72 99 chr5 198419552 198419677 -4665855 + MER58B DNA MER1_type 1 128 -2292 1803 171 10 19 chr5 198419677 198419986 -4665546 + AluJb SINE Alu 1 306 -6 860 214 72 99 chr5 198419986 198420014 -4665518 + MER58B DNA MER1_type 128 155 -2265 2490 57 10 0 chr5 198420014 198420314 -4665218 + AluY SINE Alu 1 303 -8 860 214 72 99 chr5 198420314 198420466 -4665066 + MER58B DNA MER1_type 155 300 -2120 2358 95 7 0 chr5 198420466 198420771 -4664761 - AluSp SINE Alu -6 307 1 860 214 72 99 chr5 198420771 198420808 -4664724 + MER58B DNA MER1_type 300 336 -5 2078 57 42 8 chr5 198421084 198421346 -4664186 + AluSc SINE Alu 1 271 -38 1148 113 0 18 chr5 198421347 198421515 -4664017 - AluSx SINE Alu -147 165 1 2292 91 3 13 chr5 198421564 198421862 -4663670 - AluSq SINE Alu -18 295 1 2557 60 7 0 chr5 198421871 198422171 -4663361 - AluY SINE Alu -9 302 1 1352 223 7 14 chr5 198422345 198422641 -4662891 + AluJb SINE Alu 1 294 -18 2258 117 0 0 chr5 198422877 198423176 -4662356 - AluSx SINE Alu -13 299 1 876 202 18 0 chr5 198423255 198423423 -4662109 - AluSp SINE Alu -8 305 135 925 191 12 17 chr5 198423423 198423596 -4661936 - FRAM SINE Alu -4 172 1 274 161 71 0 chr5 198424072 198424128 -4661404 - Alu SINE Alu -5 297 238 328 322 11 0 chr5 198424136 198424226 -4661306 - L2 LINE L2 -55 3217 3127 2079 112 18 0 chr5 198424233 198424510 -4661022 + AluSx SINE Alu 1 282 -30 195 69 0 0 chr5 198424513 198424542 -4660990 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 590 130 0 56 chr5 198424559 198424667 -4660865 + AluJb SINE Alu 192 293 -19 1789 160 11 11 chr5 198424908 198425195 -4660337 - AluSx SINE Alu -25 287 1 198 0 0 0 chr5 198425219 198425241 -4660291 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2311 81 3 0 chr5 198425243 198425526 -4660006 - AluSp SINE Alu -29 284 1 619 178 0 0 chr5 198425613 198425714 -4659818 - AluJb SINE Alu -20 292 192 2272 120 3 0 chr5 198426207 198426515 -4659017 - AluSp SINE Alu -4 309 1 1484 140 19 103 chr5 198426905 198427083 -4658449 - AluSx SINE Alu -10 302 161 2316 99 0 34 chr5 198427083 198427406 -4658126 - AluSx SINE Alu 0 312 1 1484 140 19 103 chr5 198427406 198427548 -4657984 - AluSx SINE Alu -151 161 9 2312 88 0 7 chr5 198427653 198427981 -4657551 - AluSg SINE Alu 0 310 1 252 193 0 18 chr5 198427982 198428039 -4657493 + Tigger1 DNA MER2_type 1776 1831 -587 1064 102 61 0 chr5 198428039 198428186 -4657346 - AluY SINE Alu -12 299 144 535 146 24 73 chr5 198428192 198428315 -4657217 + AluSg/x SINE Alu 188 304 -5 549 122 30 137 chr5 198428315 198428417 -4657115 + Tigger1 DNA MER2_type 1971 2058 -360 1879 159 10 3 chr5 198428417 198428726 -4656806 - AluSx SINE Alu -1 311 1 549 122 30 137 chr5 198428726 198428754 -4656778 + Tigger1 DNA MER2_type 2058 2087 -331 1270 199 72 25 chr5 198428776 198428871 -4656661 + AluJb SINE Alu 22 111 -201 2556 61 0 0 chr5 198428871 198429168 -4656364 + AluY SINE Alu 1 297 -14 1270 199 72 25 chr5 198429168 198429349 -4656183 + AluJb SINE Alu 111 311 -1 388 136 341 0 chr5 198429349 198429437 -4656095 + Tigger1 DNA MER2_type 2084 2201 -217 933 224 55 117 chr5 198429438 198429594 -4655938 - AluJo SINE Alu -13 289 125 222 37 0 0 chr5 198429594 198429621 -4655911 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 933 224 55 117 chr5 198429621 198429632 -4655900 - AluJo SINE Alu -177 125 115 2298 111 0 3 chr5 198429632 198429938 -4655594 - AluSx SINE Alu -7 305 1 933 224 55 117 chr5 198429938 198430077 -4655455 - AluJo SINE Alu -187 115 1 225 180 0 0 chr5 198430096 198430146 -4655386 - Alu SINE Alu 0 133 84 788 213 85 16 chr5 198430201 198430389 -4655143 + Tigger1 DNA MER2_type 2217 2417 -1 524 163 27 33 chr5 198430390 198430510 -4655022 - L1M4 LINE L1 -481 5681 5559 5558 121 46 36 chr5 198430510 198431523 -4654009 - L1MA3 LINE L1 -27 6278 5256 1163 216 30 56 chr5 198431532 198431837 -4653695 - AluJb SINE Alu -5 297 1 845 152 0 8 chr5 198432186 198432318 -4653214 + AluJb SINE Alu 1 131 -181 2257 86 10 0 chr5 198432319 198432610 -4652922 + AluSq SINE Alu 2 295 -18 190 0 67 0 chr5 198432658 198432688 -4652844 + (TA)n Simple_repeat Simple_repeat 2 33 0 623 64 70 18 chr5 198432704 198432875 -4652657 + (TA)n Simple_repeat Simple_repeat 1 180 0 2379 85 3 0 chr5 198433002 198433295 -4652237 + AluSq SINE Alu 1 294 -19 2178 107 7 0 chr5 198433389 198433680 -4651852 + AluSx SINE Alu 5 297 -15 2092 106 33 0 chr5 198433823 198434139 -4651393 - AluSq SINE Alu 0 325 1 21 0 0 0 chr5 198434279 198434300 -4651232 + AT_rich Low_complexity Low_complexity 1 21 0 433 183 11 11 chr5 198434998 198435091 -4650441 + FLAM_A SINE Alu 45 137 -5 228 67 0 0 chr5 198435114 198435144 -4650388 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 1092 115 48 0 chr5 198435171 198435336 -4650196 + AluSc SINE Alu 123 295 -14 23 33 0 0 chr5 198437726 198437756 -4647776 + GC_rich Low_complexity Low_complexity 1 30 0 27 87 0 0 chr5 198438186 198438255 -4647277 + GC_rich Low_complexity Low_complexity 1 69 0 27 73 0 0 chr5 198438394 198438449 -4647083 + GC_rich Low_complexity Low_complexity 1 55 0 216 0 0 0 chr5 198438876 198438900 -4646632 + (CCA)n Simple_repeat Simple_repeat 3 26 0 213 154 0 0 chr5 198439112 198439151 -4646381 + C-rich Low_complexity Low_complexity 3 41 0 246 214 0 122 chr5 198440837 198440935 -4644597 + MIR SINE MIR 54 139 -69 240 161 196 0 chr5 198441056 198441112 -4644420 - L2 LINE L2 -5 3267 3201 283 327 10 48 chr5 198441679 198441783 -4643749 - MIR SINE MIR -1 261 162 183 170 45 11 chr5 198441950 198442017 -4643515 + MIR SINE MIR 95 163 -99 202 402 34 26 chr5 198442370 198442604 -4642928 - L2 LINE L2 -415 2899 2664 276 216 165 31 chr5 198442678 198442775 -4642757 - MIR SINE MIR -43 219 110 1799 156 0 38 chr5 198443689 198443825 -4641707 + AluJb SINE Alu 1 141 -171 2006 121 4 0 chr5 198443825 198444132 -4641400 + AluSx SINE Alu 1 308 0 1799 156 0 38 chr5 198444132 198444308 -4641224 + AluJb SINE Alu 141 302 -10 2166 95 0 3 chr5 198444324 198444618 -4640914 + AluSg SINE Alu 1 293 -17 774 129 98 0 chr5 198445250 198445382 -4640150 + AluJb SINE Alu 1 145 -167 2333 77 3 0 chr5 198445383 198445680 -4639852 + AluY SINE Alu 1 298 -13 2220 113 0 0 chr5 198445686 198445987 -4639545 + AluSx SINE Alu 1 301 -11 407 199 64 92 chr5 198445994 198446077 -4639455 - Charlie2a DNA MER1_type -1233 1629 1550 2158 118 0 7 chr5 198446077 198446382 -4639150 + AluSg SINE Alu 1 303 -7 407 199 64 92 chr5 198446382 198446439 -4639093 - Charlie2a DNA MER1_type -1312 1550 1493 2174 126 3 3 chr5 198446454 198446763 -4638769 + AluSq SINE Alu 1 309 -4 1161 160 0 16 chr5 198447451 198447465 -4638067 - AluSg/x SINE Alu 0 312 299 348 85 102 0 chr5 198447465 198447524 -4638008 - L1MB7 LINE L1 -16 6168 6104 1161 160 0 16 chr5 198447524 198447703 -4637829 - AluSg/x SINE Alu -13 299 122 999 165 29 12 chr5 198447703 198447781 -4637751 - L1M4 LINE L1 -764 5382 5307 1740 119 91 11 chr5 198447781 198448067 -4637465 - AluSx SINE Alu -3 309 1 999 165 29 12 chr5 198448067 198448230 -4637302 - L1M4 LINE L1 -839 5307 5137 1463 181 13 23 chr5 198448236 198448539 -4636993 - AluJb SINE Alu -1 311 12 264 30 0 0 chr5 198448642 198448675 -4636857 + (CA)n Simple_repeat Simple_repeat 2 34 0 180 0 0 0 chr5 198448674 198448694 -4636838 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 2181 95 3 7 chr5 198448694 198448989 -4636543 - AluSg1 SINE Alu -15 294 1 912 139 0 0 chr5 198448994 198449123 -4636409 - FLAM_C SINE Alu -14 129 1 875 102 0 51 chr5 198449358 198449495 -4636037 - AluJb SINE Alu -31 281 152 570 237 26 0 chr5 198449748 198449862 -4635670 - FLAM_A SINE Alu -16 117 1 256 323 188 26 chr5 198449952 198450144 -4635388 - MIR SINE MIR -27 235 13 206 299 184 27 chr5 198450177 198450324 -4635208 - L2 LINE L2 -193 3079 2910 187 370 37 0 chr5 198450359 198450467 -4635065 - L2 LINE L2 -556 2758 2647 322 202 17 50 chr5 198450772 198450891 -4634641 + (CGGGG)n Simple_repeat Simple_repeat 2 116 0 255 323 16 32 chr5 198451450 198451574 -4633958 - MIR3 SINE MIR -73 135 14 2614 42 0 0 chr5 198452054 198452365 -4633167 - AluY SINE Alu 0 311 1 288 286 51 0 chr5 198453416 198453514 -4632018 + MIR SINE MIR 45 147 -61 195 42 0 0 chr5 198453978 198454002 -4631530 + (TG)n Simple_repeat Simple_repeat 2 25 0 432 82 0 0 chr5 198454119 198454180 -4631352 + (TG)n Simple_repeat Simple_repeat 2 62 0 246 280 165 23 chr5 198455222 198455375 -4630157 + MIR SINE MIR 14 165 -43 256 291 13 0 chr5 198455435 198455514 -4630018 - MIR SINE MIR -130 132 53 1897 158 0 16 chr5 198457808 198458124 -4627408 + AluJo SINE Alu 1 311 -1 310 206 325 0 chr5 198458259 198458385 -4627147 + MIR SINE MIR 86 252 -10 281 339 8 31 chr5 198459110 198459237 -4626295 - MIR SINE MIR -66 196 73 199 345 0 0 chr5 198459936 198459991 -4625541 + MIR SINE MIR 94 148 -60 428 77 15 0 chr5 198460872 198460937 -4624595 + (TCC)n Simple_repeat Simple_repeat 2 67 0 1026 60 0 0 chr5 198461177 198461311 -4624221 + (TCC)n Simple_repeat Simple_repeat 2 135 0 1922 130 34 3 chr5 198463364 198463656 -4621876 + AluSx SINE Alu 1 301 -11 610 174 13 25 chr5 198464060 198464295 -4621237 + CT-rich Low_complexity Low_complexity 1 232 0 1545 173 7 18 chr5 198464296 198464573 -4620959 - AluJo SINE Alu -3 309 36 205 324 59 0 chr5 198464838 198464906 -4620626 - MIR SINE MIR -80 182 111 2368 81 10 0 chr5 198465302 198465610 -4619922 + AluY SINE Alu 1 311 0 2150 117 0 0 chr5 198465618 198465917 -4619615 + AluSx SINE Alu 1 299 -13 2273 84 3 0 chr5 198465917 198466216 -4619316 + AluSq SINE Alu 1 300 -13 1596 166 41 57 chr5 198466392 198466650 -4618882 - MER46B DNA MER2_type -2495 236 -25 1716 147 26 29 chr5 198466650 198466791 -4618741 + AluJb SINE Alu 1 141 -171 2230 116 0 0 chr5 198466791 198467101 -4618431 + AluSx SINE Alu 1 310 -2 1716 147 26 29 chr5 198467101 198467256 -4618276 + AluJb SINE Alu 141 298 -14 2064 140 13 0 chr5 198467256 198467563 -4617969 + AluJo SINE Alu 1 311 -1 1716 147 26 29 chr5 198467563 198467578 -4617954 + AluJb SINE Alu 298 312 0 1596 166 41 57 chr5 198467578 198467686 -4617846 - MER46B DNA MER2_type -2755 4294967272 1 204 288 96 0 chr5 198467694 198467767 -4617765 + MIR SINE MIR 97 176 -86 394 363 25 0 chr5 198467850 198468007 -4617525 - MIR SINE MIR -65 197 37 2028 107 72 0 chr5 198468496 198468787 -4616745 - AluSp SINE Alu -1 312 1 495 260 110 35 chr5 198468805 198468978 -4616554 - MER5A DNA MER1_type 0 189 4 1155 117 0 0 chr5 198469016 198469170 -4616362 - AluSx SINE Alu -115 197 44 2261 98 0 0 chr5 198469173 198469469 -4616063 - AluSx SINE Alu -16 296 1 313 268 28 99 chr5 198469480 198469622 -4615910 - HAL1 LINE L1 -6 2501 2370 215 262 60 48 chr5 198469685 198469769 -4615763 + L2 LINE L2 3187 3271 -1 2221 92 0 7 chr5 198470619 198470911 -4614621 + AluSc SINE Alu 1 290 -19 2581 45 3 0 chr5 198470911 198471221 -4614311 + AluY SINE Alu 1 311 0 376 314 160 31 chr5 198471369 198471833 -4613699 + L2 LINE L2 2737 3309 -4 308 403 8 0 chr5 198472157 198472281 -4613251 + L1M LINE L1 5265 5389 -777 2322 77 6 6 chr5 198472358 198472669 -4612863 + AluY SINE Alu 1 311 0 1066 92 0 0 chr5 198472670 198472805 -4612727 + AluSq/x SINE Alu 1 136 -172 2209 104 0 0 chr5 198472805 198473104 -4612428 + AluSg SINE Alu 1 299 -11 446 0 19 0 chr5 198473257 198473311 -4612221 + (CA)n Simple_repeat Simple_repeat 2 56 0 2176 110 7 0 chr5 198473605 198473906 -4611626 + AluSq SINE Alu 1 303 -10 773 330 64 34 chr5 198473982 198474449 -4611083 - L2 LINE L2 -2 3311 2831 1204 178 0 10 chr5 198474787 198474989 -4610543 + AluJo SINE Alu 1 200 -112 321 179 94 60 chr5 198475018 198475191 -4610341 + FRAM SINE Alu 25 201 0 2158 104 10 7 chr5 198475196 198475504 -4610028 + AluSx SINE Alu 1 309 -3 2293 80 3 13 chr5 198475507 198475818 -4609714 + AluSg1 SINE Alu 1 308 -1 187 252 117 10 chr5 198476597 198476700 -4608832 + L2 LINE L2 2930 3043 -229 209 305 201 3 chr5 198476723 198477049 -4608483 - L2 LINE L2 -291 2981 2582 209 327 178 9 chr5 198477328 198477435 -4608097 - MIR SINE MIR -59 149 25 558 328 15 20 chr5 198477459 198477657 -4607875 + MIR SINE MIR 63 259 -3 1034 94 0 7 chr5 198478028 198478177 -4607355 + AluSg/x SINE Alu 154 301 -11 1976 146 0 13 chr5 198478460 198478776 -4606756 - AluSx SINE Alu 0 312 1 1977 117 13 19 chr5 198479320 198479627 -4605905 + AluSx SINE Alu 2 306 -6 2250 109 0 0 chr5 198479638 198479940 -4605592 + AluSx SINE Alu 1 302 -10 2225 65 0 10 chr5 198479940 198480230 -4605302 + AluSg SINE Alu 1 287 -23 1789 142 21 3 chr5 198481551 198481840 -4603692 + AluJb SINE Alu 2 295 -17 713 179 6 39 chr5 198481840 198482024 -4603508 + AluJb SINE Alu 134 312 0 1957 139 3 3 chr5 198482063 198482366 -4603166 + AluJb SINE Alu 2 304 -8 465 239 187 0 chr5 198482368 198482523 -4603009 + MIR SINE MIR 72 255 -7 578 223 138 40 chr5 198482880 198482971 -4602561 - MIR SINE MIR 0 262 181 1834 129 84 3 chr5 198482971 198483258 -4602274 + AluSg SINE Alu 1 310 0 578 223 138 40 chr5 198483258 198483390 -4602142 - MIR SINE MIR -81 181 17 2053 108 10 3 chr5 198483451 198483746 -4601786 + AluSq SINE Alu 1 297 -16 972 109 7 20 chr5 198483748 198483895 -4601637 + AluSq/x SINE Alu 1 145 -168 1787 135 20 34 chr5 198483896 198484192 -4601340 + AluSx SINE Alu 2 293 -19 2204 100 27 3 chr5 198484246 198484541 -4600991 + AluSq SINE Alu 3 300 -13 373 260 256 22 chr5 198484565 198484792 -4600740 + L1MC4 LINE L1 7690 7969 -73 2413 92 0 9 chr5 198484800 198485115 -4600417 - AluSp SINE Alu -1 312 1 2187 133 0 13 chr5 198485134 198485314 -4600218 - AluSx SINE Alu 0 312 136 2049 154 0 0 chr5 198485314 198485620 -4599912 - AluSx SINE Alu -6 306 1 2187 133 0 13 chr5 198485620 198485755 -4599777 - AluSx SINE Alu -176 136 1 679 190 104 32 chr5 198485959 198486180 -4599352 - L1M4 LINE L1 -1165 4981 4745 389 279 99 0 chr5 198486216 198486327 -4599205 + L2 LINE L2 3191 3312 -1 334 330 104 28 chr5 198486351 198486639 -4598893 - L2 LINE L2 -1649 1665 1356 1135 146 29 0 chr5 198486844 198487015 -4598517 - AluSp SINE Alu -9 304 129 2341 94 0 19 chr5 198487026 198487334 -4598198 - AluSc SINE Alu -7 302 1 2230 95 0 31 chr5 198487341 198487658 -4597874 - AluSx SINE Alu -5 307 1 2216 115 7 0 chr5 198487693 198487988 -4597544 - AluSp SINE Alu -16 297 1 183 80 0 0 chr5 198488021 198488046 -4597486 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1092 123 293 14 chr5 198488078 198488315 -4597217 - AluSg1 SINE Alu 0 304 9 557 192 8 25 chr5 198488412 198488532 -4597000 - FLAM_C SINE Alu -16 127 10 334 329 32 13 chr5 198488858 198489016 -4596516 + MIR SINE MIR 37 197 -65 204 267 139 12 chr5 198489099 198489180 -4596352 - MIR SINE MIR -86 176 84 1581 123 93 109 chr5 198489180 198489288 -4596244 + MER46B DNA MER2_type 1 109 -2622 1801 140 25 35 chr5 198489288 198489303 -4596229 - AluJb SINE Alu -1 311 297 2162 140 13 0 chr5 198489303 198489611 -4595921 - AluJo SINE Alu 0 312 1 1801 140 25 35 chr5 198489611 198489767 -4595765 - AluJb SINE Alu -15 297 142 2302 119 0 0 chr5 198489767 198490077 -4595455 - AluSx SINE Alu -2 310 1 1801 140 25 35 chr5 198490077 198490218 -4595314 - AluJb SINE Alu -170 142 1 1581 123 93 109 chr5 198490218 198490476 -4595056 + MER46B DNA MER2_type 109 236 0 2348 71 14 3 chr5 198490652 198490949 -4594583 - AluSq SINE Alu -13 300 1 428 243 26 40 chr5 198490951 198490977 -4594555 - MER58 DNA MER1_type -191 150 125 1841 171 10 19 chr5 198490977 198491286 -4594246 - AluJb SINE Alu -6 306 1 428 243 26 40 chr5 198491286 198491411 -4594121 - MER58 DNA MER1_type -216 125 1 416 212 12 35 chr5 198491652 198491737 -4593795 - AluJ/FLAM SINE Alu -227 85 3 1810 183 78 20 chr5 198491943 198492381 -4593151 + L1MB4 LINE L1 5587 6049 -131 819 211 98 25 chr5 198492377 198492639 -4592893 + L1MB7 LINE L1 5745 6029 -155 * 2082 88 50 0 chr5 198492639 198492922 -4592610 - AluSc SINE Alu -12 297 1 819 211 98 25 chr5 198492922 198492934 -4592598 + L1MB7 LINE L1 6029 6039 -145 703 217 103 29 chr5 198493022 198493303 -4592229 + L1MB4 LINE L1 5879 6180 0 2390 78 3 13 chr5 198493310 198493617 -4591915 + AluSx SINE Alu 1 304 -8 2503 41 0 10 chr5 198493694 198493986 -4591546 + AluY SINE Alu 1 289 -22 264 209 45 9 chr5 198493988 198494098 -4591434 + L1M4 LINE L1 3856 3969 -2177 7369 95 52 5 chr5 198494098 198495205 -4590327 + HSMAR1 DNA Mariner 1 1158 -129 2326 113 0 3 chr5 198495205 198495515 -4590017 + AluSx SINE Alu 1 309 -3 460 191 0 0 chr5 198495588 198495672 -4589860 - Tigger5 DNA MER2_type -1 2322 2239 602 186 26 83 chr5 198495740 198496004 -4589528 + L1M4 LINE L1 4411 4659 -1487 480 122 0 14 chr5 198496102 198496176 -4589356 - Tigger5 DNA MER2_type 0 2323 2251 254 143 86 14 chr5 198496189 198496259 -4589273 - Tigger5 DNA MER2_type 0 2323 2249 370 232 86 48 chr5 198496288 198496430 -4589102 + L1M4 LINE L1 4694 4853 -1293 2406 75 7 3 chr5 198496430 198496725 -4588807 - AluSp SINE Alu -17 296 1 370 232 86 48 chr5 198496725 198496811 -4588721 + L1M4 LINE L1 4853 4934 -1212 26 30 0 0 chr5 198497168 198497201 -4588331 + AT_rich Low_complexity Low_complexity 1 33 0 357 295 0 70 chr5 198497690 198497779 -4587753 - L2 LINE L2 0 3313 3238 2056 168 0 0 chr5 198497779 198498082 -4587450 - AluSx SINE Alu -9 303 1 357 295 0 70 chr5 198498082 198498148 -4587384 - L2 LINE L2 -75 3238 3169 2168 125 3 3 chr5 198498280 198498576 -4586956 + AluSx SINE Alu 1 296 -16 198 0 0 0 chr5 198498585 198498607 -4586925 + (CA)n Simple_repeat Simple_repeat 2 23 0 * 243 0 0 0 chr5 198498606 198498633 -4586899 + (TC)n Simple_repeat Simple_repeat 1 27 0 2244 97 3 28 chr5 198498732 198499051 -4586481 - AluSx SINE Alu -1 311 1 464 352 56 5 chr5 198499120 198499316 -4586216 - MIR SINE MIR -18 244 39 1951 135 7 23 chr5 198499796 198500100 -4585432 - AluSx SINE Alu -9 303 5 2291 112 0 10 chr5 198500123 198500436 -4585096 - AluSq SINE Alu -3 310 1 240 185 0 11 chr5 198500453 198500547 -4584985 + CT-rich Low_complexity Low_complexity 1 92 0 901 120 0 30 chr5 198500659 198500792 -4584740 - FLAM_C SINE Alu -4 129 1 465 210 216 44 chr5 198500917 198500936 -4584596 + MIR SINE MIR 21 35 -227 1990 130 18 3 chr5 198500936 198501221 -4584311 - AluSx SINE Alu -21 291 3 465 210 216 44 chr5 198501221 198501382 -4584150 + MIR SINE MIR 35 232 -30 336 211 55 64 chr5 198502303 198502412 -4583120 - MLT1J LTR MaLR -310 201 94 2158 100 28 3 chr5 198502483 198502772 -4582760 - AluSx SINE Alu -16 296 1 2062 119 29 23 chr5 198502821 198503131 -4582401 - AluSx SINE Alu 0 312 1 576 240 8 0 chr5 198503134 198503255 -4582277 - FLAM_A SINE Alu -15 127 6 2287 81 0 7 chr5 198503591 198503898 -4581634 - AluSx SINE Alu 0 305 1 695 334 40 10 chr5 198503953 198504255 -4581277 + MLT1K LTR MaLR 34 344 -244 254 263 12 12 chr5 198504311 198504391 -4581141 + MLT1K LTR MaLR 451 530 -58 293 206 0 0 chr5 198504586 198504654 -4580878 - MLT1F1 LTR MaLR 0 567 500 2987 103 46 29 chr5 198504667 198504698 -4580834 - MER31A LTR ERV1 0 485 456 2366 95 13 0 chr5 198504698 198505004 -4580528 - AluSx SINE Alu -2 310 1 2987 103 46 29 chr5 198505004 198505449 -4580083 - MER31A LTR ERV1 -29 456 1 753 266 20 5 chr5 198505449 198505648 -4579884 - MLT1F1 LTR MaLR -269 298 97 1659 163 21 14 chr5 198505648 198505779 -4579753 + AluJo SINE Alu 1 130 -182 2315 113 0 0 chr5 198505779 198506079 -4579453 + AluSq SINE Alu 4 303 -10 1659 163 21 14 chr5 198506079 198506229 -4579303 + AluJo SINE Alu 130 284 -28 233 224 24 82 chr5 198506247 198506332 -4579200 - MLT1F1 LTR MaLR -460 107 28 2112 121 0 16 chr5 198506337 198506644 -4578888 - AluSg SINE Alu -8 302 1 2390 63 3 38 chr5 198506658 198506977 -4578555 - AluY SINE Alu -3 308 1 269 243 0 14 chr5 198507064 198507138 -4578394 - MLT1K LTR MaLR -15 573 501 596 213 9 0 chr5 198507139 198507247 -4578285 - FLAM_A SINE Alu -19 123 15 594 226 114 94 chr5 198507568 198508042 -4577490 - MLT1H LTR MaLR -4 545 10 2066 149 0 0 chr5 198508160 198508461 -4577071 + AluJb SINE Alu 1 301 -11 358 301 92 80 chr5 198508530 198508769 -4576763 - L2 LINE L2 0 3272 3031 610 172 263 5 chr5 198508805 198508943 -4576589 - MLT1K LTR MaLR -1 587 486 1980 107 4 0 chr5 198508943 198509196 -4576336 - AluSx SINE Alu -58 254 1 610 172 263 5 chr5 198509196 198509243 -4576289 - MLT1K LTR MaLR -102 486 354 282 290 37 9 chr5 198509266 198509373 -4576159 - MLT1K LTR MaLR -410 178 69 2631 59 3 0 chr5 198510050 198510357 -4575175 - AluY SINE Alu -2 309 2 812 139 31 0 chr5 198510379 198510508 -4575024 - FLAM_A SINE Alu 0 133 1 278 276 26 0 chr5 198510601 198510677 -4574855 - MIR SINE MIR -111 97 20 381 291 306 5 chr5 198511103 198511299 -4574233 - MIR SINE MIR -6 256 2 2083 121 20 3 chr5 198511680 198511977 -4573555 - AluSq SINE Alu -11 302 1 802 30 0 0 chr5 198512535 198512634 -4572898 + L1PA4 LINE L1 6054 6152 -3 34 0 0 0 chr5 198512634 198512668 -4572864 + AT_rich Low_complexity Low_complexity 1 34 0 202 295 67 76 chr5 198512948 198513053 -4572479 + MIR SINE MIR 16 119 -89 * 501 270 69 29 chr5 198513038 198513212 -4572320 - L2 LINE L2 0 3313 3133 216 337 41 0 chr5 198513251 198513349 -4572183 + MIR SINE MIR 108 209 -53 2222 66 7 23 chr5 198513922 198514226 -4571306 - AluY SINE Alu -12 299 1 269 243 0 14 chr5 198514313 198514387 -4571145 - MLT1K LTR MaLR -15 573 501 596 213 9 0 chr5 198514388 198514496 -4571036 - FLAM_A SINE Alu -19 123 15 594 226 114 94 chr5 198514816 198515290 -4570242 - MLT1H LTR MaLR -4 545 10 2066 149 0 0 chr5 198515408 198515709 -4569823 + AluJb SINE Alu 1 301 -11 358 301 92 80 chr5 198515778 198516017 -4569515 - L2 LINE L2 0 3272 3031 610 172 263 5 chr5 198516053 198516191 -4569341 - MLT1K LTR MaLR -1 587 486 1945 106 4 4 chr5 198516191 198516445 -4569087 - AluSx SINE Alu -58 254 1 610 172 263 5 chr5 198516445 198516492 -4569040 - MLT1K LTR MaLR -102 486 354 282 290 37 9 chr5 198516515 198516622 -4568910 - MLT1K LTR MaLR -410 178 69 2561 68 3 0 chr5 198517299 198517607 -4567925 - AluY SINE Alu -1 310 2 812 139 31 0 chr5 198517629 198517758 -4567774 - FLAM_A SINE Alu 0 133 1 278 276 26 0 chr5 198517851 198517927 -4567605 - MIR SINE MIR -111 97 20 381 291 306 5 chr5 198518353 198518549 -4566983 - MIR SINE MIR -6 256 2 1201 218 74 0 chr5 198518761 198519045 -4566487 + L1ME2 LINE L1 5456 5760 -402 1005 115 0 7 chr5 198519051 198519190 -4566342 + AluJo SINE Alu 1 138 -174 1906 132 24 3 chr5 198519191 198519480 -4566052 + AluJb SINE Alu 6 300 -12 1037 243 82 50 chr5 198519483 198519544 -4565988 + L1ME2 LINE L1 5765 5823 -341 2276 92 17 3 chr5 198519544 198519838 -4565694 - AluSx SINE Alu -14 298 1 1037 243 82 50 chr5 198519838 198520154 -4565378 + L1ME2 LINE L1 5823 6154 -10 1332 250 120 18 chr5 198520199 198520707 -4564825 + MLT1K LTR MaLR 2 561 -27 303 354 20 0 chr5 198520938 198521037 -4564495 + MIR SINE MIR 35 135 -73 907 143 8 0 chr5 198521057 198521190 -4564342 - AluSq/x SINE Alu -178 134 1 843 189 33 0 chr5 198521758 198521911 -4563621 - FRAM SINE Alu -8 158 1 2097 121 0 16 chr5 198521926 198522232 -4563300 - AluSx SINE Alu -11 301 1 958 216 18 0 chr5 198522251 198522422 -4563110 - FAM SINE Alu -1 174 1 286 298 114 23 chr5 198522666 198522797 -4562735 + L2 LINE L2 2613 2755 -559 363 113 0 0 chr5 198523096 198523158 -4562374 + (CA)n Simple_repeat Simple_repeat 1 62 0 396 345 57 2 chr5 198524608 198524806 -4560726 - MIR SINE MIR -14 248 38 328 291 64 28 chr5 198524855 198524996 -4560536 + MIR3 SINE MIR 8 153 -55 1140 157 23 65 chr5 198525094 198525311 -4560221 - AluJo SINE Alu -20 292 85 204 181 0 60 chr5 198525320 198525372 -4560160 - MIR SINE MIR -152 110 65 273 231 46 0 chr5 198525736 198525801 -4559731 + MIR SINE MIR 108 175 -87 1054 105 0 0 chr5 198525806 198525939 -4559593 + AluSq/x SINE Alu 1 133 -179 318 295 215 15 chr5 198526080 198526280 -4559252 + MIR SINE MIR 20 259 -3 354 257 64 9 chr5 198526320 198526429 -4559103 + L2 LINE L2 3119 3233 -80 2247 112 0 0 chr5 198527545 198527841 -4557691 - AluSc SINE Alu -13 296 1 2343 72 10 7 chr5 198527884 198528176 -4557356 - AluY SINE Alu -18 293 1 2129 104 13 13 chr5 198528182 198528480 -4557052 - AluSq SINE Alu -15 298 1 2091 100 57 0 chr5 198528484 198528765 -4556767 - AluSg SINE Alu -13 297 1 298 122 14 127 chr5 198528765 198528871 -4556661 - AluJb SINE Alu -157 145 87 533 281 72 39 chr5 198529111 198529264 -4556268 + L2 LINE L2 3115 3272 0 655 239 39 65 chr5 198529658 198529888 -4555644 + MIR SINE MIR 31 254 -8 965 100 23 0 chr5 198529976 198530106 -4555426 + AluSq/x SINE Alu 1 133 -180 252 305 127 8 chr5 198530353 198530471 -4555061 + MIR SINE MIR 73 204 -58 2313 72 14 0 chr5 198530514 198530818 -4554714 - AluSp SINE Alu 0 308 1 2159 112 7 3 chr5 198530890 198531186 -4554346 + AluSq SINE Alu 1 297 -16 252 305 127 8 chr5 198531781 198531899 -4553633 + MIR SINE MIR 73 204 -58 2276 84 3 7 chr5 198531942 198532251 -4553281 - AluSq SINE Alu 0 308 1 1970 112 65 4 chr5 198532406 198532682 -4552850 - AluSq SINE Alu -20 293 1 5472 52 9 3 chr5 198532781 198533455 -4552077 - L1PA5 LINE L1 0 6154 5477 2003 106 58 24 chr5 198533458 198533615 -4551917 - AluSx SINE Alu -9 303 153 2310 105 0 0 chr5 198533615 198533919 -4551613 - AluSx SINE Alu -8 304 1 2003 106 58 24 chr5 198533919 198534054 -4551478 - AluSx SINE Alu -159 153 1 2141 120 0 3 chr5 198534378 198534678 -4550854 + AluSx SINE Alu 1 299 -13 1155 196 33 82 chr5 198534927 198535014 -4550518 + Tigger7 DNA MER2_type 7 97 -636 2041 97 7 7 chr5 198535014 198535338 -4550194 + AluSq SINE Alu 1 324 0 1695 162 14 0 chr5 198535346 198535636 -4549896 + AluJb SINE Alu 5 298 -14 1155 196 33 82 chr5 198535636 198535806 -4549726 + Tigger7 DNA MER2_type 104 263 -470 518 222 0 10 chr5 198535805 198535904 -4549628 + Tigger7 DNA MER2_type 2487 2584 -3 * 641 203 0 58 chr5 198536261 198536373 -4549159 + AluJo/FLAM SINE Alu 1 105 -197 2126 112 0 10 chr5 198536373 198536676 -4548856 - AluSc SINE Alu -8 301 2 641 203 0 58 chr5 198536676 198536701 -4548831 + AluJo/FLAM SINE Alu 105 130 -172 282 150 0 0 chr5 198536789 198536829 -4548703 - Tigger5 DNA MER2_type 0 2323 2284 502 179 0 32 chr5 198536861 198536956 -4548576 - Tigger5 DNA MER2_type -2231 92 1 1766 126 7 48 chr5 198537229 198537539 -4547993 + AluSx SINE Alu 1 297 -15 1487 183 14 7 chr5 198537539 198537829 -4547703 - AluJb SINE Alu -20 292 1 405 253 222 40 chr5 198537833 198537875 -4547657 + MER102a DNA MER1_type 64 97 -1320 2233 95 0 3 chr5 198537875 198538181 -4547351 + AluSc SINE Alu 1 305 -4 405 253 222 40 chr5 198538181 198538237 -4547295 + MER102a DNA MER1_type 97 141 -1276 2427 77 0 3 chr5 198538237 198538549 -4546983 + AluY SINE Alu 1 311 0 405 253 222 40 chr5 198538549 198538674 -4546858 + MER102a DNA MER1_type 141 329 -1 2041 96 0 7 chr5 198539591 198539871 -4545661 + AluSc SINE Alu 15 292 -17 559 229 166 6 chr5 198539885 198540060 -4545472 - MIR SINE MIR -56 206 4 400 270 25 93 chr5 198540532 198540626 -4544906 + L1ME4a LINE L1 5808 5882 -239 1897 144 6 6 chr5 198540626 198540939 -4544593 + AluSq SINE Alu 1 313 0 400 270 25 93 chr5 198540939 198541048 -4544484 + L1ME4a LINE L1 5882 5997 -124 2171 100 23 0 chr5 198541066 198541366 -4544166 - AluSp SINE Alu -6 307 1 612 225 120 96 chr5 198541539 198541773 -4543759 + L1ME4a LINE L1 5642 5869 -252 1706 145 13 28 chr5 198541773 198541908 -4543624 + AluSq SINE Alu 1 137 -176 1769 139 10 16 chr5 198541908 198542211 -4543321 + AluSq SINE Alu 1 301 -12 1706 145 13 28 chr5 198542211 198542393 -4543139 + AluSq SINE Alu 137 313 0 612 225 120 96 chr5 198542393 198542435 -4543097 + L1ME4a LINE L1 5869 5909 -212 1673 87 0 0 chr5 198542435 198542700 -4542832 + AluSg/x SINE Alu 66 330 0 612 225 120 96 chr5 198542700 198542878 -4542654 + L1ME4a LINE L1 5909 6109 -12 325 226 137 24 chr5 198543004 198543128 -4542404 + L1ME4a LINE L1 5967 6104 -17 230 234 43 43 chr5 198543173 198543267 -4542265 + L1ME LINE L1 5840 5933 -188 2060 109 3 13 chr5 198543396 198543699 -4541833 - AluSx SINE Alu -12 300 1 237 277 108 0 chr5 198543723 198543806 -4541726 - MIR SINE MIR -71 191 100 813 154 0 23 chr5 198543921 198544051 -4541481 + FLAM_C SINE Alu 1 127 -6 2113 102 3 7 chr5 198544057 198544351 -4541181 + AluY SINE Alu 1 293 -18 232 311 50 67 chr5 198545810 198545929 -4539603 + L2 LINE L2 3155 3271 -1 1722 157 7 7 chr5 198545937 198546231 -4539301 - AluJb SINE Alu -18 294 1 185 296 0 0 chr5 198546336 198546380 -4539152 - MIR SINE MIR -140 122 79 1622 142 0 77 chr5 198546416 198546572 -4538960 + AluJb SINE Alu 1 123 -189 1865 108 0 0 chr5 198546572 198546822 -4538710 + AluSx SINE Alu 5 254 -58 1622 142 0 77 chr5 198546822 198546976 -4538556 + AluJb SINE Alu 123 287 -25 408 255 154 1 chr5 198547168 198547305 -4538227 - MIR SINE MIR -74 188 36 596 257 79 35 chr5 198547577 198547779 -4537753 - MIR SINE MIR -15 247 37 413 335 127 5 chr5 198548081 198548278 -4537254 - MIR SINE MIR -40 222 2 187 291 70 35 chr5 198548282 198548368 -4537164 - MIR SINE MIR -99 163 75 458 225 33 17 chr5 198548916 198549036 -4536496 + MER113 DNA MER1_type? 306 427 -94 2167 107 3 0 chr5 198549079 198549378 -4536154 + AluSx SINE Alu 5 304 -8 2417 69 0 3 chr5 198549515 198549821 -4535711 - AluY SINE Alu -6 305 1 1549 155 0 87 chr5 198549942 198550264 -4535268 + AluJb SINE Alu 1 294 -18 1830 151 20 0 chr5 198550529 198550804 -4534728 + AluSx SINE Alu 1 284 -28 297 0 0 0 chr5 198550804 198550837 -4534695 + (CA)n Simple_repeat Simple_repeat 2 34 0 1830 151 20 0 chr5 198550837 198550866 -4534666 + AluSx SINE Alu 284 311 -1 1383 189 0 75 chr5 198551301 198551634 -4533898 + AluJo SINE Alu 1 308 -4 1964 276 103 43 chr5 198551668 198552504 -4533028 - L2 LINE L2 -338 2976 2091 336 228 24 41 chr5 198552599 198552722 -4532810 + L1ME1 LINE L1 63 183 -6359 401 238 20 40 chr5 198552783 198552884 -4532648 - AluJb SINE Alu -24 278 180 471 236 0 45 chr5 198553389 198553499 -4532033 + MLT1F LTR MaLR 192 296 -294 549 172 11 0 chr5 198553613 198553706 -4531826 + MLT1F LTR MaLR 378 471 -71 2198 72 7 20 chr5 198553776 198554081 -4531451 + AluSg SINE Alu 1 301 -9 1174 119 0 6 chr5 198554084 198554252 -4531280 + AluSq SINE Alu 132 298 -15 1931 154 3 0 chr5 198554399 198554710 -4530822 + AluSx SINE Alu 1 312 0 1742 145 0 63 chr5 198555188 198555520 -4530012 + AluJo SINE Alu 1 311 -1 1418 199 3 20 chr5 198555529 198555821 -4529711 + AluJb SINE Alu 1 287 -25 2219 79 0 0 chr5 198555893 198556215 -4529317 + AluY SINE Alu 1 322 0 1318 207 10 17 chr5 198556339 198556634 -4528898 + AluJo SINE Alu 1 293 -19 712 193 0 50 chr5 198556801 198556941 -4528591 - FLAM_A SINE Alu 0 133 1 2026 109 7 7 chr5 198557005 198557299 -4528233 + AluSq SINE Alu 1 294 -19 235 171 0 0 chr5 198557299 198557334 -4528198 + Alu SINE Alu 2 36 -267 452 143 0 12 chr5 198557335 198557412 -4528120 + AluSc SINE Alu 227 304 -5 2069 123 16 3 chr5 198557412 198557721 -4527811 + AluSq SINE Alu 1 313 0 1817 242 52 22 chr5 198557770 198558370 -4527162 + L1ME1 LINE L1 1290 1907 -4739 2108 98 10 0 chr5 198558385 198558690 -4526842 + AluSx SINE Alu 3 310 -2 713 142 0 0 chr5 198558690 198558803 -4526729 + AluSp/q SINE Alu 196 308 -5 1610 113 97 20 chr5 198558803 198559103 -4526429 + L1MB7 LINE L1 5861 6183 -1 907 63 0 0 chr5 198559109 198559220 -4526312 + AluY SINE Alu 1 111 -200 1054 80 20 7 chr5 198559226 198559377 -4526155 - AluSx SINE Alu -159 153 1 882 206 76 13 chr5 198559383 198559621 -4525911 + L1ME1 LINE L1 3249 3501 -3143 1871 161 22 10 chr5 198559649 198559960 -4525572 - MER21B LTR ERV1 -49 814 500 1623 151 0 32 chr5 198559935 198560214 -4525318 + MER50 LTR ERV1 409 678 -56 * 320 228 0 0 chr5 198560229 198560286 -4525246 - AluJ/FLAM SINE Alu -245 57 1 1014 246 70 67 chr5 198560290 198560664 -4524868 - MER21B LTR ERV1 -389 474 100 2507 64 0 0 chr5 198560698 198561009 -4524523 + AluY SINE Alu 1 311 0 235 178 0 84 chr5 198561118 198561195 -4524337 - MER21A LTR ERV1 -768 95 27 225 0 0 0 chr5 198561195 198561220 -4524312 + (TA)n Simple_repeat Simple_repeat 2 26 0 317 181 38 95 chr5 198561230 198561335 -4524197 + L1ME1 LINE L1 3486 3584 -3060 1763 95 63 21 chr5 198561389 198561674 -4523858 + AluSx SINE Alu 16 312 0 1284 163 108 24 chr5 198561770 198562058 -4523474 + AluJo SINE Alu 1 312 0 1243 120 0 5 chr5 198562110 198562294 -4523238 - AluSg/x SINE Alu -10 302 120 2060 104 14 0 chr5 198562368 198562657 -4522875 + AluSx SINE Alu 1 293 -19 1699 122 26 16 chr5 198562663 198562967 -4522565 + LTR56 LTR ERV1 21 327 -118 2088 131 0 7 chr5 198563057 198563363 -4522169 + AluSx SINE Alu 3 306 -6 1991 108 0 46 chr5 198563411 198563717 -4521815 + AluSx SINE Alu 1 292 -20 3116 227 87 2 chr5 198563741 198564753 -4520779 + L1ME1 LINE L1 5548 6654 -10 353 328 46 8 chr5 198565035 198565166 -4520366 + L2 LINE L2 3136 3271 -1 2113 80 27 10 chr5 198565217 198565517 -4520015 + AluSx SINE Alu 1 305 -7 216 0 0 0 chr5 198565538 198565562 -4519970 + (TG)n Simple_repeat Simple_repeat 2 25 0 330 328 46 15 chr5 198565759 198565890 -4519642 + L2 LINE L2 3137 3271 -1 2029 84 27 13 chr5 198565941 198566239 -4519293 + AluSx SINE Alu 1 302 -10 198 0 0 0 chr5 198566260 198566282 -4519250 + (TG)n Simple_repeat Simple_repeat 2 23 0 250 184 26 0 chr5 198566304 198566380 -4519152 + (TA)n Simple_repeat Simple_repeat 1 78 0 30 27 0 0 chr5 198566419 198566456 -4519076 + AT_rich Low_complexity Low_complexity 1 37 0 241 371 53 23 chr5 198567994 198568126 -4517406 - MIR SINE MIR -71 191 56 415 284 71 22 chr5 198568143 198568326 -4517206 + L2 LINE L2 2207 2398 -916 706 257 137 70 chr5 198568332 198568488 -4517044 + L2 LINE L2 2593 2737 -576 2142 68 10 0 chr5 198568488 198568780 -4516752 + AluSp SINE Alu 1 295 -18 706 257 137 70 chr5 198568780 198569129 -4516403 + L2 LINE L2 2737 3216 -97 1930 139 3 10 chr5 198569129 198569430 -4516102 - AluSg SINE Alu -1 309 11 706 257 137 70 chr5 198569430 198569534 -4515998 + L2 LINE L2 3216 3312 -1 1230 275 86 20 chr5 198569563 198569708 -4515824 - L2 LINE L2 -2 3311 3177 2320 61 3 3 chr5 198569708 198570002 -4515530 + AluY SINE Alu 1 294 -17 1230 275 86 20 chr5 198570002 198570310 -4515222 - L2 LINE L2 -136 3177 2828 2041 116 17 0 chr5 198570496 198570789 -4514743 - AluSq SINE Alu -15 298 1 1594 141 69 31 chr5 198570794 198571084 -4514448 - AluJo SINE Alu -11 301 1 272 321 62 9 chr5 198571173 198571285 -4514247 - MIR SINE MIR -74 134 17 336 164 0 29 chr5 198571336 198571404 -4514128 - FLAM_A SINE Alu 0 133 72 2118 128 3 0 chr5 198572064 198572370 -4513162 - AluSx SINE Alu -5 307 1 1679 146 64 0 chr5 198572487 198572767 -4512765 + AluJo SINE Alu 1 298 -14 1794 109 62 4 chr5 198572773 198573048 -4512484 + AluSq SINE Alu 7 297 -16 244 22 133 0 chr5 198573367 198573412 -4512120 + (CATTT)n Simple_repeat Simple_repeat 4 54 0 2057 103 0 0 chr5 198573417 198573698 -4511834 - AluSq SINE Alu -32 281 1 1976 62 3 100 chr5 198573708 198574029 -4511503 - AluSc SINE Alu -19 290 1 2056 126 3 0 chr5 198574046 198574356 -4511176 - AluSx SINE Alu -1 311 1 1905 147 10 0 chr5 198574358 198574651 -4510881 - AluSx SINE Alu -16 296 1 327 244 157 9 chr5 198574669 198574784 -4510748 - L2 LINE L2 -2914 400 269 679 270 49 0 chr5 198575137 198575322 -4510210 + MIR SINE MIR 66 259 -3 940 116 0 0 chr5 198575359 198575488 -4510044 - AluSq/x SINE Alu -183 129 1 657 153 0 18 chr5 198575718 198575851 -4509681 - AluSg/x SINE Alu 0 302 172 2265 163 66 60 chr5 198575943 198576085 -4509447 + MER68 LTR ERV1 1 141 -421 2059 114 26 7 chr5 198576085 198576392 -4509140 + AluSq SINE Alu 1 313 0 2265 163 66 60 chr5 198576392 198576733 -4508799 + MER68 LTR ERV1 141 487 -75 369 0 0 0 chr5 198577037 198577078 -4508454 + (TG)n Simple_repeat Simple_repeat 2 42 0 1752 121 61 0 chr5 198577081 198577345 -4508187 - AluSx SINE Alu -32 280 1 413 169 13 13 chr5 198577346 198577423 -4508109 - AluJ/FRAM SINE Alu -17 295 219 2325 78 0 0 chr5 198577626 198577922 -4507610 + AluY SINE Alu 1 296 -15 639 26 0 0 chr5 198577924 198578000 -4507532 - MER11A LTR ERVK -1190 76 1 509 196 0 0 chr5 198578014 198578111 -4507421 - L1M4 LINE L1 -1016 5130 5034 1228 170 0 5 chr5 198578111 198578342 -4507190 - AluJo SINE Alu 0 314 85 774 198 0 8 chr5 198578342 198578468 -4507064 - FAM SINE Alu -60 125 1 1412 139 12 67 chr5 198578504 198578834 -4506698 - AluJb SINE Alu 0 312 1 1664 95 74 8 chr5 198578956 198579199 -4506333 + AluSx SINE Alu 35 293 -19 351 259 62 0 chr5 198579362 198579443 -4506089 - L2 LINE L2 -33 3280 3195 1094 135 0 17 chr5 198579518 198579696 -4505836 - AluJo SINE Alu -18 294 120 30 0 0 0 chr5 198579718 198579748 -4505784 + AT_rich Low_complexity Low_complexity 1 30 0 301 81 0 0 chr5 198579748 198579785 -4505747 - AluSx SINE Alu -14 286 250 1589 87 0 5 chr5 198579785 198579993 -4505539 - AluSx SINE Alu -105 207 1 686 134 0 0 chr5 198579995 198580092 -4505440 - AluJo SINE Alu -181 131 35 397 281 8 16 chr5 198580194 198580315 -4505217 - MLT1L LTR MaLR 0 615 496 562 232 99 33 chr5 198580382 198580437 -4505095 - MLT1F1 LTR MaLR -5 562 512 1713 158 20 13 chr5 198580437 198580740 -4504792 + AluJo SINE Alu 1 305 -7 562 232 99 33 chr5 198580740 198580835 -4504697 - MLT1F1 LTR MaLR -55 512 402 * 701 266 75 39 chr5 198580823 198581096 -4504436 - MLT1F1 LTR MaLR -290 277 1 242 360 99 41 chr5 198581226 198581520 -4504012 - L2 LINE L2 -4 3268 2958 2239 101 0 0 chr5 198581627 198581923 -4503609 - AluSx SINE Alu -16 296 1 366 322 106 26 chr5 198582098 198582371 -4503161 - L1ME3 LINE L1 -216 5946 5652 2203 79 3 3 chr5 198582384 198582687 -4502845 - AluSx SINE Alu -8 304 2 233 269 102 37 chr5 198582701 198582809 -4502723 - L1ME3 LINE L1 -523 5641 5527 244 306 16 0 chr5 198583896 198583958 -4501574 - MIR SINE MIR -188 74 12 220 250 40 13 chr5 198584116 198584192 -4501340 + MIR SINE MIR 103 180 -82 1805 126 3 39 chr5 198584375 198584685 -4500847 + AluJo SINE Alu 4 302 -10 850 137 78 26 chr5 198584685 198584838 -4500694 + AluJb SINE Alu 134 294 -18 1475 174 32 4 chr5 198585641 198585894 -4499638 + AluJb SINE Alu 24 283 -29 2265 85 0 0 chr5 198586065 198586374 -4499158 - AluSg SINE Alu 0 309 1 205 152 0 0 chr5 198586520 198586553 -4498979 + (TG)n Simple_repeat Simple_repeat 1 33 0 215 310 14 14 chr5 198586705 198586776 -4498756 - L2 LINE L2 -1 3312 3242 2198 79 18 0 chr5 198586928 198587227 -4498305 - AluY SINE Alu 0 304 1 728 204 165 2 chr5 198587237 198587431 -4498101 - L1MB8 LINE L1 -1 6177 5946 1445 123 36 132 chr5 198587437 198587770 -4497762 - AluJo SINE Alu 0 302 2 2280 82 0 38 chr5 198587773 198588091 -4497441 - AluY SINE Alu -5 306 1 281 331 39 0 chr5 198588096 198588226 -4497306 - L1 LINE L1 -1439 4707 4573 425 208 52 0 chr5 198588272 198588368 -4497164 - L1 LINE L1 -1571 4575 4475 7141 110 25 25 chr5 198588417 198588948 -4496584 + L1MA2 LINE L1 4832 5361 -943 2415 90 3 0 chr5 198588948 198589249 -4496283 + AluSp SINE Alu 1 302 -11 7141 110 25 25 chr5 198589249 198589495 -4496037 + L1MA2 LINE L1 5361 5605 -699 2217 75 17 3 chr5 198589495 198589787 -4495745 + AluY SINE Alu 2 297 -14 7141 110 25 25 chr5 198589787 198590473 -4495059 + L1MA2 LINE L1 5605 6303 -1 1471 177 78 7 chr5 198590569 198590840 -4494692 - AluJo SINE Alu -22 290 1 2217 93 4 0 chr5 198591055 198591364 -4494168 - AluSp SINE Alu 0 312 3 1954 117 46 11 chr5 198591366 198591649 -4493883 - AluSx SINE Alu -11 301 9 243 306 185 9 chr5 198591650 198591758 -4493774 - L2 LINE L2 -12 3260 3134 461 329 97 52 chr5 198591854 198592146 -4493386 - L2 LINE L2 -196 3076 2799 2401 70 3 3 chr5 198592146 198592448 -4493084 - AluY SINE Alu -9 302 1 461 329 97 52 chr5 198592448 198592749 -4492783 - L2 LINE L2 -473 2799 2426 299 256 38 62 chr5 198593168 198593328 -4492204 - L1M4b LINE L1 -6612 247 92 2214 199 83 24 chr5 198593455 198593987 -4491545 - L1ME1 LINE L1 -63 6103 5541 2207 116 0 3 chr5 198593987 198594290 -4491242 - AluY SINE Alu -9 302 1 1810 159 57 17 chr5 198594290 198594586 -4490946 - AluSx SINE Alu -4 308 1 578 193 62 0 chr5 198594586 198594731 -4490801 - L1ME LINE L1 -389 5777 5624 2501 133 109 79 chr5 198594735 198595293 -4490239 + LTR4 LTR ERV1 22 596 0 1139 214 39 18 chr5 198595293 198595628 -4489904 - L1ME LINE L1 -546 5632 5301 263 183 0 17 chr5 198595628 198595688 -4489844 - Alu SINE Alu -1 301 243 2316 109 0 0 chr5 198595823 198596127 -4489405 - AluSq SINE Alu -8 305 2 364 152 0 87 chr5 198596239 198596331 -4489201 - L1PA3 LINE L1 -4 6151 6068 1468 174 0 13 chr5 198596367 198596602 -4488930 + AluJb SINE Alu 3 234 -78 328 122 20 0 chr5 198596602 198596651 -4488881 - Alu SINE Alu -252 50 1 2097 126 17 0 chr5 198596656 198596950 -4488582 - AluSx SINE Alu -13 299 1 398 184 0 0 chr5 198596951 198597027 -4488505 - L1ME LINE L1 -864 5282 5207 1073 211 0 40 chr5 198597031 198597254 -4488278 - AluJo SINE Alu -13 299 86 340 138 0 15 chr5 198597266 198597331 -4488201 - L1ME LINE L1 -954 5192 5129 779 179 0 30 chr5 198597377 198597511 -4488021 - FLAM_C SINE Alu -3 130 1 22 0 0 0 chr5 198597562 198597584 -4487948 + AT_rich Low_complexity Low_complexity 1 22 0 1103 172 0 16 chr5 198597724 198597910 -4487622 - AluJb SINE Alu -23 289 107 2359 79 0 0 chr5 198597911 198598203 -4487329 - AluY SINE Alu -19 292 1 500 76 0 0 chr5 198598203 198598269 -4487263 - AluSp SINE Alu -10 303 238 * 770 75 11 0 chr5 198598265 198598359 -4487173 - AluSp SINE Alu -160 153 59 2336 93 0 10 chr5 198598543 198598854 -4486678 + AluY SINE Alu 1 308 -3 1532 205 11 7 chr5 198598891 198599174 -4486358 + AluJo SINE Alu 11 294 -18 26 0 0 0 chr5 198599284 198599310 -4486222 + AT_rich Low_complexity Low_complexity 1 26 0 1672 189 56 39 chr5 198599370 198599642 -4485890 - MLT1A1 LTR MaLR -2 363 82 2533 64 0 3 chr5 198599642 198599954 -4485578 - AluY SINE Alu 0 311 1 1672 189 56 39 chr5 198599954 198600036 -4485496 - MLT1A1 LTR MaLR -283 82 3 1932 153 10 0 chr5 198600181 198600475 -4485057 - AluSx SINE Alu -15 297 1 1947 149 27 54 chr5 198600840 198600873 -4484659 - L1MB5 LINE L1 0 6174 6142 2395 90 3 0 chr5 198600873 198601174 -4484358 + AluSc SINE Alu 1 302 -7 1947 149 27 54 chr5 198601174 198601510 -4484022 - L1MB5 LINE L1 -32 6142 5815 914 163 11 53 chr5 198601512 198601702 -4483830 - L1MB5 LINE L1 -608 5575 5394 1430 163 25 28 chr5 198601702 198601984 -4483548 - AluJb SINE Alu -9 303 23 1044 148 6 6 chr5 198602018 198602180 -4483352 - AluJb SINE Alu -18 294 133 1875 159 7 23 chr5 198602181 198602490 -4483042 - AluSx SINE Alu -8 304 1 558 232 95 70 chr5 198602507 198602617 -4482915 - L1MB5 LINE L1 -1778 4368 4262 2298 104 0 3 chr5 198602617 198602916 -4482616 - AluSq SINE Alu -15 298 1 558 232 95 70 chr5 198602916 198603090 -4482442 - L1MB5 LINE L1 -1884 4262 4077 1033 174 26 5 chr5 198603106 198603296 -4482236 - AluJo SINE Alu -118 194 1 1327 157 50 103 chr5 198603296 198603467 -4482065 - AluJo SINE Alu -10 302 154 1960 128 0 0 chr5 198603467 198603740 -4481792 - AluSx SINE Alu 0 312 40 1327 157 50 103 chr5 198603740 198603887 -4481645 - AluJo SINE Alu -158 154 1 426 246 0 66 chr5 198603887 198604009 -4481523 - L1MB5 LINE L1 -2046 4100 3987 1105 193 5 37 chr5 198604031 198604249 -4481283 + AluJo SINE Alu 87 297 -15 2260 114 0 0 chr5 198604384 198604683 -4480849 - AluSq SINE Alu -14 299 1 6438 68 16 283 chr5 198604750 198606627 -4478905 - SVA Other Other -2 1384 11 1038 89 7 0 chr5 198606718 198606853 -4478679 + AluSq/x SINE Alu 1 136 -176 2043 126 11 0 chr5 198606853 198607139 -4478393 + AluSx SINE Alu 1 289 -23 677 225 101 0 chr5 198607734 198607903 -4477629 - MER3 DNA MER1_type -12 197 12 1386 188 57 11 chr5 198608051 198608333 -4477199 - AluJo SINE Alu -17 295 1 2313 105 0 6 chr5 198608408 198608721 -4476811 + AluY SINE Alu 1 311 0 1598 137 0 51 chr5 198608821 198609077 -4476455 + AluJo SINE Alu 11 253 -59 24 32 0 0 chr5 198609124 198609155 -4476377 + AT_rich Low_complexity Low_complexity 1 31 0 480 165 0 0 chr5 198609486 198609577 -4475955 + (TGGA)n Simple_repeat Simple_repeat 2 92 0 1934 241 22 23 chr5 198609577 198610052 -4475480 - MLT2B2 LTR ERVL -37 457 1 2171 81 56 3 chr5 198610232 198610516 -4475016 - AluSx SINE Alu -13 299 1 469 309 149 18 chr5 198610827 198611325 -4474207 - L1M4 LINE L1 -1932 4214 3652 2314 57 0 7 chr5 198611452 198611763 -4473769 - AluY SINE Alu 0 309 1 2161 129 0 3 chr5 198611915 198612225 -4473307 - AluSx SINE Alu -3 309 1 630 94 0 75 chr5 198612240 198612346 -4473186 - AluSg/x SINE Alu 0 310 213 801 218 133 8 chr5 198612358 198612606 -4472926 - L1M4 LINE L1 -3361 2785 2507 2306 96 0 3 chr5 198612611 198612912 -4472620 - AluSx SINE Alu -12 300 1 1220 155 50 25 chr5 198613015 198613254 -4472278 - L1MB7 LINE L1 -126 6058 5814 1187 164 48 61 chr5 198613253 198613513 -4472019 - L1MB7 LINE L1 -593 5575 5330 * 1276 157 59 111 chr5 198613513 198613837 -4471695 - AluJo SINE Alu -5 307 1 1187 164 48 61 chr5 198613837 198613907 -4471625 - L1MB7 LINE L1 -838 5330 5261 342 241 98 35 chr5 198614517 198614682 -4470850 - L1MCa LINE L1 -6252 651 16 1329 167 71 28 chr5 198614686 198614968 -4470564 - AluJo SINE Alu -8 304 11 1342 146 131 22 chr5 198615021 198615288 -4470244 - AluSg1 SINE Alu -13 296 1 1248 256 130 11 chr5 198615292 198615760 -4469772 - L1MB7 LINE L1 -978 5168 4645 929 199 42 119 chr5 198615787 198615941 -4469591 - AluJb SINE Alu -24 288 168 1593 201 42 0 chr5 198615941 198616230 -4469302 - AluJb SINE Alu -11 301 1 929 199 42 119 chr5 198616230 198616387 -4469145 - AluJb SINE Alu -144 168 1 640 217 35 62 chr5 198616390 198616616 -4468916 - MER106A DNA MER1_type -16 220 1 2324 97 0 0 chr5 198616634 198616934 -4468598 + AluSx SINE Alu 1 300 -12 262 294 65 0 chr5 198616934 198617087 -4468445 - L1MB7 LINE L1 -2762 3384 3222 2313 89 0 13 chr5 198617088 198617392 -4468140 - AluSx SINE Alu -12 300 1 2383 71 3 7 chr5 198617430 198617727 -4467805 - AluY SINE Alu -15 296 1 1164 191 42 146 chr5 198617727 198617916 -4467616 - L1MC5 LINE L1 -829 7132 6925 2086 139 0 0 chr5 198617916 198618219 -4467313 - AluSq SINE Alu -10 303 1 1164 191 42 146 chr5 198618219 198618557 -4466975 - L1MC5 LINE L1 -1036 6925 6660 522 242 33 8 chr5 198618653 198618773 -4466759 - L2 LINE L2 -1 3312 3190 183 336 157 8 chr5 198618777 198618911 -4466621 + MIR3 SINE MIR 48 201 -7 2348 101 0 3 chr5 198619550 198619857 -4465675 - AluSx SINE Alu -6 306 1 354 149 0 14 chr5 198621383 198621457 -4464075 - L1ME4a LINE L1 -9 6112 6040 2246 102 0 3 chr5 198621460 198621754 -4463778 - AluSg SINE Alu -17 293 1 22 25 0 25 chr5 198621903 198621924 -4463608 + AT_rich Low_complexity Low_complexity 1 22 -17 1580 203 3 3 chr5 198621924 198622224 -4463308 - AluJb SINE Alu -12 300 1 22 25 0 25 chr5 198622224 198622242 -4463290 + AT_rich Low_complexity Low_complexity 22 39 0 350 217 177 34 chr5 198622374 198622549 -4462983 - L1MC5 LINE L1 -1797 6011 5812 1240 269 47 15 chr5 198622612 198623015 -4462517 - L1MC5 LINE L1 -468 5653 5267 454 316 100 5 chr5 198623427 198623639 -4461893 + MIR SINE MIR 21 256 -6 738 210 14 21 chr5 198624225 198624368 -4461164 + FLAM_C SINE Alu 2 143 0 2287 81 3 7 chr5 198624409 198624705 -4460827 - AluY SINE Alu -16 295 1 491 241 73 33 chr5 198625207 198625531 -4460001 - L1ME4a LINE L1 -254 5867 5494 2130 133 0 0 chr5 198626305 198626606 -4458926 - AluSx SINE Alu -11 301 1 569 268 116 18 chr5 198626975 198627199 -4458333 + MIR SINE MIR 2 247 -15 2289 92 3 3 chr5 198627199 198627494 -4458038 - AluSp SINE Alu -18 295 1 2814 13 0 0 chr5 198627506 198627809 -4457723 - AluYa5 SINE Alu -8 303 1 433 273 110 11 chr5 198628754 198628951 -4456581 - MIR SINE MIR -40 222 8 397 259 27 18 chr5 198629324 198629436 -4456096 - L3 LINE CR1 -1 1576 1464 33 43 0 0 chr5 198631618 198631665 -4453867 + AT_rich Low_complexity Low_complexity 1 47 0 704 221 24 0 chr5 198631665 198631792 -4453740 - FRAM SINE Alu -45 131 2 1615 155 31 69 chr5 198632473 198632790 -4452742 - AluJo SINE Alu -7 305 1 26 50 0 0 chr5 198633280 198633320 -4452212 + AT_rich Low_complexity Low_complexity 1 40 0 501 17 0 0 chr5 198633712 198633770 -4451762 + (TG)n Simple_repeat Simple_repeat 2 59 0 1683 160 53 32 chr5 198634002 198634340 -4451192 - MLT1A1 LTR MaLR -11 354 10 839 204 12 12 chr5 198634448 198634610 -4450922 - FRAM SINE Alu -4 162 1 965 225 9 28 chr5 198634610 198634828 -4450704 - MER58A DNA MER1_type -10 214 1 1552 199 52 68 chr5 198635091 198635532 -4450000 + L1ME1 LINE L1 5728 6161 -5 2188 109 16 3 chr5 198636365 198636668 -4448864 - AluSx SINE Alu -5 307 1 805 21 0 0 chr5 198637228 198637324 -4448208 + L1PA4 LINE L1 6057 6152 -3 34 0 0 0 chr5 198637324 198637358 -4448174 + AT_rich Low_complexity Low_complexity 1 34 0 211 306 63 72 chr5 198637633 198637744 -4447788 + MIR3 SINE MIR 10 119 -89 * 518 335 29 6 chr5 198637729 198637899 -4447633 - L2 LINE L2 0 3272 3099 223 337 41 0 chr5 198637942 198638040 -4447492 + MIR SINE MIR 108 209 -53 2433 71 7 0 chr5 198638613 198638910 -4446622 - AluY SINE Alu -12 299 1 1056 58 6 26 chr5 198638946 198639102 -4446430 + L1PA4 LINE L1 6000 6152 -3 2002 158 0 0 chr5 198639595 198639892 -4445640 - AluSx SINE Alu -13 299 3 1809 134 0 0 chr5 198639906 198640168 -4445364 - AluSx SINE Alu -1 311 50 7614 37 2 2 chr5 198640169 198641066 -4444466 - MER11D LTR ERVK 0 897 1 341 151 18 0 chr5 198641066 198641135 -4444397 - Alu SINE Alu -247 53 1 403 298 99 11 chr5 198641405 198641586 -4443946 + MIR SINE MIR 60 256 -6 361 295 110 29 chr5 198642505 198642678 -4442854 + MIR SINE MIR 32 218 -44 213 227 61 15 chr5 198642733 198642799 -4442733 + MIR SINE MIR 185 253 -9 1044 128 15 91 chr5 198643358 198643651 -4441881 - AluSx SINE Alu 0 313 41 871 150 13 26 chr5 198643756 198643909 -4441623 - AluSq/x SINE Alu -162 151 1 2432 72 3 16 chr5 198643914 198644221 -4441311 - AluY SINE Alu -8 303 1 2305 82 17 3 chr5 198644542 198644833 -4440699 + AluSq SINE Alu 1 295 -18 468 315 116 4 chr5 198645398 198645665 -4439867 - L1ME4a LINE L1 -186 5935 5639 625 260 96 27 chr5 198645685 198645904 -4439628 + MIR SINE MIR 29 262 0 2101 142 20 12 chr5 198646938 198647282 -4438250 - MER7A DNA MER2_type -1 345 1 1986 159 0 13 chr5 198647395 198647710 -4437822 - AluJb SINE Alu 0 312 2 2162 139 3 0 chr5 198648462 198648772 -4436760 - AluJb SINE Alu 0 312 2 2363 85 10 0 chr5 198649160 198649467 -4436065 - AluY SINE Alu -1 310 1 1334 238 130 49 chr5 198649618 198650270 -4435262 - L2 LINE L2 0 3313 2632 338 333 172 6 chr5 198650334 198650508 -4435024 + MIR SINE MIR 60 262 0 211 388 61 10 chr5 198651177 198651275 -4434257 - L2 LINE L2 -62 3210 3108 235 293 60 8 chr5 198651638 198651771 -4433761 - MLT1K LTR MaLR -10 578 439 240 288 13 137 chr5 198652628 198652781 -4432751 - L2 LINE L2 -102 3170 3037 1854 169 3 19 chr5 198652854 198653162 -4432370 + AluJo SINE Alu 1 303 -9 227 258 101 56 chr5 198653245 198653423 -4432109 - L1ME4a LINE L1 -582 5539 5354 207 0 0 0 chr5 198653808 198653831 -4431701 + (A)n Simple_repeat Simple_repeat 1 23 0 321 89 0 0 chr5 198654138 198654183 -4431349 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 2043 107 37 10 chr5 198654687 198654986 -4430546 - AluSg1 SINE Alu -2 307 1 308 281 100 9 chr5 198655525 198655661 -4429871 - MIR SINE MIR -62 146 17 530 276 131 36 chr5 198656097 198656318 -4429214 - MIR SINE MIR 0 262 21 286 254 85 24 chr5 198656948 198657113 -4428419 - L1MC5 LINE L1 -32 7929 7755 2307 65 7 14 chr5 198657115 198657409 -4428123 - AluY SINE Alu -19 292 1 2259 101 0 10 chr5 198657422 198657719 -4427813 - AluSg SINE Alu -16 294 1 2345 75 0 7 chr5 198657728 198658021 -4427511 - AluY SINE Alu -20 291 1 255 198 56 56 chr5 198658021 198658141 -4427391 - L1MC5 LINE L1 -306 7655 7536 1319 277 127 33 chr5 198708287 198708927 -4376605 - L2 LINE L2 -343 2971 2272 905 263 45 7 chr5 198708936 198709225 -4376307 - L2 LINE L2 -1621 1693 1394 4705 206 58 44 chr5 198709227 198710005 -4375527 + L1M4 LINE L1 3818 4584 -1562 2406 84 0 19 chr5 198710005 198710313 -4375219 + AluSp SINE Alu 1 302 -11 4705 206 58 44 chr5 198710313 198710712 -4374820 + L1M4 LINE L1 4584 5037 -1109 373 194 133 21 chr5 198710712 198710817 -4374715 + FLAM_A SINE Alu 9 115 -18 4705 206 58 44 chr5 198710817 198711063 -4374469 + L1M4 LINE L1 5037 5278 -868 519 223 0 0 chr5 198711063 198711166 -4374366 - AluSg/x SINE Alu -39 271 169 380 154 15 0 chr5 198711170 198711235 -4374297 + L1MB8 LINE L1 6106 6171 -7 1268 271 80 10 chr5 198711268 198711755 -4373777 - L2 LINE L2 -1954 1360 840 846 237 26 0 chr5 198711768 198711958 -4373574 - MER105 DNA DNA -9 195 1 264 233 55 0 chr5 198711988 198712061 -4373471 - L2 LINE L2 -2569 745 669 197 37 0 0 chr5 198712080 198712107 -4373425 - L2 LINE L2 -2613 701 675 202 320 27 13 chr5 198712219 198712294 -4373238 - L2 LINE L2 -3160 154 79 967 146 39 34 chr5 198712295 198712417 -4373115 + MER3 DNA MER1_type 1 126 -83 2086 140 3 0 chr5 198712417 198712717 -4372815 - AluSq SINE Alu -12 301 1 967 146 39 34 chr5 198712717 198712772 -4372760 + MER3 DNA MER1_type 126 179 -30 2121 142 0 0 chr5 198712795 198713105 -4372427 - AluSx SINE Alu -2 310 1 419 272 136 25 chr5 198713727 198713962 -4371570 - MIR SINE MIR 0 262 2 198 71 0 0 chr5 198714573 198714601 -4370931 + (T)n Simple_repeat Simple_repeat 1 28 0 283 220 220 21 chr5 198714601 198714641 -4370891 + MIR SINE MIR 80 111 -151 2215 108 0 3 chr5 198714641 198714936 -4370596 + AluSg SINE Alu 1 294 -16 283 220 220 21 chr5 198714936 198715036 -4370496 + MIR SINE MIR 111 248 -14 479 238 9 0 chr5 198715438 198715543 -4369989 + L3 LINE CR1 433 538 -1039 199 209 47 0 chr5 198715583 198715626 -4369906 - L3 LINE CR1 -7 1570 1526 244 336 96 14 chr5 198715810 198715956 -4369576 + L2 LINE L2 3107 3264 -8 812 244 79 13 chr5 198715993 198716222 -4369310 + L3 LINE CR1 595 838 -739 238 191 0 21 chr5 198716590 198716637 -4368895 + LTR67 LTR ERVL 142 187 -370 256 256 26 43 chr5 198716774 198716891 -4368641 - L2 LINE L2 -43 3270 3156 1930 154 3 10 chr5 198716900 198717212 -4368320 - AluJb SINE Alu 0 312 3 450 368 25 16 chr5 198717254 198717496 -4368036 + L3 LINE CR1 913 1156 -421 240 305 86 13 chr5 198717507 198717658 -4367874 + MIR SINE MIR 35 196 -66 2386 85 0 7 chr5 198717941 198718246 -4367286 + AluSx SINE Alu 1 303 -9 1230 130 0 36 chr5 198718248 198718440 -4367092 + AluSp SINE Alu 120 304 -9 246 265 15 15 chr5 198718446 198718514 -4367018 + L3 LINE CR1 1464 1531 -46 1020 197 41 18 chr5 198718514 198718732 -4366800 + MER58A DNA MER1_type 2 224 0 27 0 0 0 chr5 198719490 198719517 -4366015 + AT_rich Low_complexity Low_complexity 1 27 0 2409 93 6 0 chr5 198719745 198720056 -4365476 - AluSp SINE Alu 0 313 1 262 298 152 28 chr5 198720838 198721016 -4364516 - MIR SINE MIR 0 262 63 200 224 0 20 chr5 198721210 198721259 -4364273 - L3b LINE CR1 -197 1386 1339 650 230 73 115 chr5 198722493 198723119 -4362413 - L1ME4a LINE L1 0 6121 5522 204 283 17 0 chr5 198724263 198724323 -4361209 + MIR SINE MIR 202 262 0 23 0 0 0 chr5 198725799 198725822 -4359710 + AT_rich Low_complexity Low_complexity 1 23 0 391 235 144 15 chr5 198726889 198727021 -4358511 - MIR SINE MIR -3 259 111 203 247 137 0 chr5 198727586 198727659 -4357873 + MIR SINE MIR 104 186 -76 723 273 168 12 chr5 198728105 198728439 -4357093 + LTR16C LTR ERVL 4 389 -102 436 304 35 0 chr5 198728487 198728602 -4356930 + MER96 DNA MER1_type? 57 175 0 291 203 135 14 chr5 198728602 198728676 -4356856 + LTR16C LTR ERVL 409 491 0 305 258 98 15 chr5 198728676 198728808 -4356724 - MIR SINE MIR -89 173 31 2216 104 7 14 chr5 198729106 198729403 -4356129 - AluSx SINE Alu -17 295 1 266 344 94 0 chr5 198729439 198729567 -4355965 - L2 LINE L2 -8 3264 3125 1714 171 7 13 chr5 198731703 198732002 -4353530 - AluJb SINE Alu -15 297 1 190 200 157 14 chr5 198732130 198732200 -4353332 - L2 LINE L2 -54 3259 3180 263 146 18 0 chr5 198732279 198732334 -4353198 + (TGAA)n Simple_repeat Simple_repeat 1 56 0 229 375 141 20 chr5 198732859 198733357 -4352175 - L2 LINE L2 -896 2418 1861 403 281 44 30 chr5 198733943 198734078 -4351454 - MIR SINE MIR -50 212 76 288 231 154 0 chr5 198734332 198734436 -4351096 + L2 LINE L2 3153 3272 0 268 219 0 16 chr5 198735365 198735429 -4350103 + MIR SINE MIR 90 147 -61 2181 96 7 0 chr5 198735482 198735783 -4349749 + AluSq SINE Alu 1 303 -10 2297 81 7 0 chr5 198735785 198736081 -4349451 + AluY SINE Alu 3 300 -11 407 298 34 56 chr5 198736737 198736971 -4348561 - MIR SINE MIR -14 248 15 336 296 19 24 chr5 198737383 198737540 -4347992 - MIR SINE MIR -58 150 6 246 318 30 20 chr5 198737617 198737782 -4347750 + MIR SINE MIR 40 201 -7 479 371 118 10 chr5 198738481 198738794 -4346738 + L2 LINE L2 2965 3311 -2 211 308 0 77 chr5 198740323 198740440 -4345092 - MIR SINE MIR -55 207 100 831 236 12 0 chr5 198742797 198742962 -4342570 + FRAM SINE Alu 1 167 -9 624 294 102 59 chr5 198744402 198744616 -4340916 - L3 LINE CR1 -40 1537 1301 1943 119 28 14 chr5 198744616 198744901 -4340631 - AluSx SINE Alu -19 293 5 624 294 102 59 chr5 198744901 198745040 -4340492 - L3 LINE CR1 -276 1301 1169 2215 107 0 0 chr5 198745140 198745430 -4340102 + AluSg SINE Alu 1 290 -20 253 249 158 17 chr5 198747212 198747330 -4338202 + MIR SINE MIR 28 144 -64 * 525 299 95 24 chr5 198747320 198747531 -4338001 + MIR SINE MIR 15 240 -22 23 0 0 0 chr5 198749966 198749989 -4335543 + AT_rich Low_complexity Low_complexity 1 23 0 239 274 101 36 chr5 198751767 198751986 -4333546 + L2 LINE L2 2827 3059 -213 588 325 112 14 chr5 198755268 198755761 -4329771 - L2 LINE L2 -692 2622 2082 198 293 165 15 chr5 198755953 198756086 -4329446 + L2 LINE L2 3160 3312 -1 229 279 19 67 chr5 198757026 198757130 -4328402 + MIR SINE MIR 31 129 -79 217 303 53 7 chr5 198757789 198757941 -4327591 + (TGGG)n Simple_repeat Simple_repeat 3 161 0 227 199 32 70 chr5 198758670 198758826 -4326706 + (GTGTG)n Simple_repeat Simple_repeat 5 154 0 38 0 0 0 chr5 198762504 198762542 -4322990 + AT_rich Low_complexity Low_complexity 1 38 0 231 281 16 0 chr5 198764067 198764131 -4321401 + CT-rich Low_complexity Low_complexity 2 66 0 312 140 35 0 chr5 198765489 198765546 -4319986 - MIR SINE MIR -61 147 89 214 327 0 0 chr5 198765748 198765803 -4319729 + L2 LINE L2 3204 3258 -14 239 360 75 21 chr5 198766010 198766196 -4319336 + L2 LINE L2 2570 2765 -549 185 196 20 0 chr5 198766640 198766691 -4318841 + GA-rich Low_complexity Low_complexity 2 53 0 218 295 15 7 chr5 198766989 198767072 -4318460 + GA-rich Low_complexity Low_complexity 4 137 0 283 297 14 29 chr5 198767181 198767319 -4318213 + GA-rich Low_complexity Low_complexity 3 138 0 219 246 0 0 chr5 198767356 198767413 -4318119 + GA-rich Low_complexity Low_complexity 5 61 0 216 317 68 31 chr5 198767764 198767925 -4317607 + L2 LINE L2 2887 3053 -260 299 324 14 29 chr5 198768603 198768742 -4316790 + MIR SINE MIR 56 192 -70 437 284 75 15 chr5 198769756 198769890 -4315642 + MIR SINE MIR 81 222 -40 841 82 0 15 chr5 198772090 198772224 -4313308 + (TTCC)n Simple_repeat Simple_repeat 2 133 0 312 286 22 0 chr5 198772553 198772644 -4312888 + L2 LINE L2 2951 3043 -229 305 140 18 0 chr5 198773394 198773451 -4312081 + (TG)n Simple_repeat Simple_repeat 2 59 0 855 270 130 8 chr5 198773612 198774147 -4311385 - L2 LINE L2 -4 3309 2714 255 356 30 79 chr5 198774238 198774440 -4311092 + L2 LINE L2 2988 3179 -93 266 261 35 56 chr5 198775793 198775935 -4309597 + MLT1K LTR MaLR 419 557 -31 536 305 141 15 chr5 198775946 198776215 -4309317 + L2 LINE L2 2967 3269 -3 248 28 56 0 chr5 198776635 198776671 -4308861 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 359 347 171 9 chr5 198777771 198778117 -4307415 + L2 LINE L2 2895 3296 -17 552 124 26 13 chr5 198778551 198778704 -4306828 + (TG)n Simple_repeat Simple_repeat 1 155 0 288 247 134 9 chr5 198778913 198779028 -4306504 - MIR SINE MIR -60 148 34 405 199 233 20 chr5 198779693 198779839 -4305693 - MIR SINE MIR -71 191 15 358 267 11 0 chr5 198781144 198781234 -4304298 + MIR SINE MIR 34 124 -84 2076 101 35 0 chr5 198781353 198781640 -4303892 - AluSx SINE Alu -15 297 1 434 135 54 63 chr5 198781644 198781755 -4303777 - Charlie8 DNA MER1_type -2255 162 53 213 255 20 0 chr5 198785477 198785528 -4300004 - L2 LINE L2 -205 3067 3016 538 309 162 13 chr5 198786030 198786418 -4299114 + L2 LINE L2 2818 3263 -50 212 250 31 0 chr5 198786615 198786679 -4298853 - L2 LINE L2 -339 2974 2909 814 285 168 5 chr5 198788447 198788833 -4296699 - L1ME1 LINE L1 -3 6163 5715 2313 109 3 0 chr5 198788849 198789161 -4296371 - AluSq SINE Alu 0 313 1 4497 113 42 8 chr5 198789185 198789822 -4295710 - L1PB1 LINE L1 -3 6148 5478 2518 53 0 0 chr5 198789822 198790125 -4295407 - AluY SINE Alu -8 303 1 4497 113 42 8 chr5 198790125 198790265 -4295267 - L1PB1 LINE L1 -673 5478 5344 507 221 7 40 chr5 198790265 198790414 -4295118 - L1ME1 LINE L1 -438 5728 5585 593 251 89 22 chr5 198790458 198790637 -4294895 - MIR SINE MIR -70 192 2 1602 114 29 123 chr5 198791879 198792229 -4293303 + AluYb8 SINE Alu 1 317 -1 652 276 80 78 chr5 198793105 198793580 -4291952 + MLT1K LTR MaLR 1 476 0 204 379 30 18 chr5 198793596 198793765 -4291767 - L2 LINE L2 -423 2891 2721 329 250 70 31 chr5 198793963 198794091 -4291441 + L2 LINE L2 3181 3313 0 183 288 0 85 chr5 198795572 198795631 -4289901 - MIR SINE MIR -91 171 118 258 32 0 0 chr5 198796276 198796307 -4289225 + (CA)n Simple_repeat Simple_repeat 2 32 0 623 84 11 0 chr5 198797274 198797369 -4288163 + (GA)n Simple_repeat Simple_repeat 1 96 0 314 333 65 40 chr5 198797788 198797989 -4287543 + L2 LINE L2 3099 3304 -9 2258 79 20 0 chr5 198798031 198798336 -4287196 + AluY SINE Alu 1 311 0 2545 142 34 12 chr5 198798475 198798892 -4286640 + L1PA15 LINE L1 5740 6165 0 255 413 18 12 chr5 198799252 198799419 -4286113 + L2 LINE L2 2685 2852 -462 314 270 42 53 chr5 198799486 198799609 -4285923 - MIR SINE MIR -62 146 67 266 375 0 0 chr5 198799624 198799720 -4285812 - MIR SINE MIR -6 256 161 235 326 11 22 chr5 198799737 198799829 -4285703 + MIR SINE MIR 102 192 -70 2193 116 0 0 chr5 198799838 198800149 -4285383 + AluSx SINE Alu 1 311 -1 456 226 0 0 chr5 198801034 198801189 -4284343 + (CA)n Simple_repeat Simple_repeat 1 155 0 521 163 11 33 chr5 198801200 198801384 -4284148 + (CA)n Simple_repeat Simple_repeat 1 180 0 1470 143 0 0 chr5 198801653 198801869 -4283663 + AluSg/x SINE Alu 76 291 -19 1098 124 6 22 chr5 198802083 198802588 -4282944 + (TCCA)n Simple_repeat Simple_repeat 1 497 0 2164 106 6 16 chr5 198802588 198802899 -4282633 - AluSg SINE Alu -2 308 1 371 152 13 0 chr5 198802900 198802979 -4282553 + (TCCA)n Simple_repeat Simple_repeat 4 83 0 494 296 110 26 chr5 198802984 198803248 -4282284 - L2 LINE L2 -71 3242 2957 3940 143 22 28 chr5 198803949 198804265 -4281267 + L1MB5 LINE L1 5505 5821 -353 2417 94 0 0 chr5 198804265 198804572 -4280960 + AluSx SINE Alu 1 307 -5 3940 143 22 28 chr5 198804572 198804809 -4280723 + L1MB5 LINE L1 5821 6056 -118 2397 53 10 0 chr5 198804809 198805110 -4280422 + AluY SINE Alu 1 304 -7 3940 143 22 28 chr5 198805110 198805228 -4280304 + L1MB5 LINE L1 6056 6173 -1 286 198 62 52 chr5 198805704 198805800 -4279732 + L2 LINE L2 2965 3061 -211 275 262 16 0 chr5 198805847 198805908 -4279624 + L2 LINE L2 3204 3265 -7 189 184 82 0 chr5 198806026 198806075 -4279457 + MIR SINE MIR 61 113 -95 358 165 47 12 chr5 198807092 198807177 -4278355 - Charlie8 DNA MER1_type -2224 193 106 228 250 56 0 chr5 198807297 198807369 -4278163 - MLT1K LTR MaLR -7 581 506 187 330 174 0 chr5 198808103 198808218 -4277314 - L3 LINE CR1 -182 1395 1261 472 339 42 34 chr5 198808464 198808818 -4276714 + L2 LINE L2 2382 2738 -576 707 264 70 47 chr5 198809530 198809775 -4275757 - MIR SINE MIR -4 258 14 632 253 93 21 chr5 198810006 198810200 -4275332 - MER63A DNA MER1_type 0 210 3 497 369 96 16 chr5 198810994 198811306 -4274226 + L3 LINE CR1 211 547 -1030 2488 77 0 0 chr5 198811320 198811631 -4273901 - AluY SINE Alu 0 311 1 1178 15 0 0 chr5 198811636 198811766 -4273766 - AluY SINE Alu -181 130 1 236 264 103 84 chr5 198811832 198811987 -4273545 + L3 LINE CR1 608 765 -812 496 268 61 98 chr5 198811987 198812416 -4273116 + MLT1K LTR MaLR 154 566 -22 297 335 91 57 chr5 198812447 198812778 -4272754 + L3 LINE CR1 1065 1406 -171 224 268 219 0 chr5 198813127 198813250 -4272282 + MIR SINE MIR 59 208 -54 197 250 196 9 chr5 198813346 198813458 -4272074 + MIR3 SINE MIR 13 145 -63 26 30 0 0 chr5 198813782 198813815 -4271717 + GC_rich Low_complexity Low_complexity 1 33 0 22 109 0 0 chr5 198813868 198813960 -4271572 + GC_rich Low_complexity Low_complexity 1 92 0 428 264 121 21 chr5 198814966 198815106 -4270426 - MIR SINE MIR -1 261 108 391 242 33 98 chr5 198815613 198815766 -4269766 - MIR3 SINE MIR -40 168 26 185 304 0 0 chr5 198819401 198819447 -4266085 - L2 LINE L2 -3 3269 3224 209 132 0 19 chr5 198821002 198821055 -4264477 + (CGGG)n Simple_repeat Simple_repeat 4 55 0 27 29 0 0 chr5 198821341 198821375 -4264157 + GC_rich Low_complexity Low_complexity 1 34 0 23 68 0 0 chr5 198821561 198821605 -4263927 + GC_rich Low_complexity Low_complexity 1 44 0 249 317 10 20 chr5 198822012 198822113 -4263419 + MIR SINE MIR 22 122 -86 269 206 32 0 chr5 198822297 198822360 -4263172 - Charlie8 DNA MER1_type -3 2414 2350 * 848 256 60 41 chr5 198822348 198822766 -4262766 - Charlie8 DNA MER1_type -1930 487 62 324 0 0 0 chr5 198822875 198822911 -4262621 + (TG)n Simple_repeat Simple_repeat 2 37 0 1962 113 34 3 chr5 198823132 198823257 -4262275 + AluSx SINE Alu 1 121 -191 243 0 0 0 chr5 198823257 198823284 -4262248 + (CA)n Simple_repeat Simple_repeat 2 28 0 1962 113 34 3 chr5 198823284 198823449 -4262083 + AluSx SINE Alu 121 300 -12 458 336 23 59 chr5 198823450 198823670 -4261862 - MIR SINE MIR -32 230 19 579 181 154 7 chr5 198823820 198823969 -4261563 - MLT1I LTR MaLR 0 409 239 476 240 70 0 chr5 198824021 198824150 -4261382 - MLT1I LTR MaLR -267 142 5 343 324 29 43 chr5 198824177 198824384 -4261148 + L2 LINE L2 2842 3045 -268 313 287 22 99 chr5 198824874 198825055 -4260477 - MER5A DNA MER1_type -13 176 10 811 386 64 4 chr5 198825065 198825612 -4259920 - L3 LINE CR1 -664 913 334 1690 162 17 3 chr5 198825629 198826094 -4259438 - AluJb SINE Alu 0 312 1 1259 267 84 23 chr5 198826212 198826654 -4258878 + MLT1K LTR MaLR 4 472 -4 1282 244 6 6 chr5 198826672 198826983 -4258549 + AluJo SINE Alu 1 311 -1 743 314 18 0 chr5 198827596 198827822 -4257710 - MIR SINE MIR -1 261 32 501 151 0 0 chr5 198827900 198827986 -4257546 + (CA)n Simple_repeat Simple_repeat 2 87 0 401 272 101 19 chr5 198829278 198829436 -4256096 + MER5A DNA MER1_type 19 189 0 209 176 0 0 chr5 198829612 198829646 -4255886 + (CA)n Simple_repeat Simple_repeat 1 34 0 486 233 58 0 chr5 198829647 198829767 -4255765 + MER106A DNA MER1_type 108 234 -2 280 182 16 64 chr5 198829830 198830017 -4255515 + (CA)n Simple_repeat Simple_repeat 1 178 0 256 206 15 15 chr5 198830034 198830102 -4255430 + (CA)n Simple_repeat Simple_repeat 1 68 0 276 213 25 0 chr5 198830126 198830248 -4255284 + (CA)n Simple_repeat Simple_repeat 1 125 0 183 244 16 8 chr5 198830264 198830391 -4255141 + (CA)n Simple_repeat Simple_repeat 2 129 0 230 223 22 58 chr5 198830602 198830741 -4254791 + (CA)n Simple_repeat Simple_repeat 1 134 0 7082 76 1 4 chr5 198830926 198831944 -4253588 - HERVK9 LTR ERVK -3107 2809 1795 401 272 101 19 chr5 198832357 198832515 -4253017 + MER5A DNA MER1_type 19 189 0 209 176 0 0 chr5 198832690 198832724 -4252808 + (CA)n Simple_repeat Simple_repeat 1 34 0 504 207 58 8 chr5 198832725 198832846 -4252686 + MER106A DNA MER1_type 108 234 -2 324 175 19 10 chr5 198832909 198833012 -4252520 + (CA)n Simple_repeat Simple_repeat 1 104 0 316 229 12 18 chr5 198833086 198833256 -4252276 + (CA)n Simple_repeat Simple_repeat 2 170 0 424 201 18 25 chr5 198833273 198833526 -4252006 + (CA)n Simple_repeat Simple_repeat 1 251 0 220 197 13 13 chr5 198833543 198833619 -4251913 + (CA)n Simple_repeat Simple_repeat 1 76 0 293 195 16 43 chr5 198833692 198833877 -4251655 + (CA)n Simple_repeat Simple_repeat 1 180 0 234 231 22 5 chr5 198833892 198834087 -4251445 + (CA)n Simple_repeat Simple_repeat 1 198 0 256 209 0 58 chr5 198834103 198834189 -4251343 + (CA)n Simple_repeat Simple_repeat 2 82 0 306 241 12 19 chr5 198834201 198834363 -4251169 + (CA)n Simple_repeat Simple_repeat 2 162 0 593 230 6 0 chr5 198834810 198834988 -4250544 + (TG)n Simple_repeat Simple_repeat 1 179 0 190 222 208 42 chr5 198835088 198835160 -4250372 + L2 LINE L2 3189 3272 0 192 239 43 76 chr5 198835205 198835297 -4250235 - MIR SINE MIR -75 187 99 215 247 112 22 chr5 198837250 198837354 -4248178 + MIR SINE MIR 6 119 -89 853 295 63 48 chr5 198837396 198838052 -4247480 - L2 LINE L2 -2 3311 2643 938 292 94 38 chr5 198838351 198838905 -4246627 + MLT1K LTR MaLR 2 586 -2 265 240 21 104 chr5 198838963 198838998 -4246534 - MIR SINE MIR -73 189 153 2147 116 3 26 chr5 198838998 198839301 -4246231 - AluSx SINE Alu -16 296 1 265 240 21 104 chr5 198839301 198839361 -4246171 - MIR SINE MIR -109 153 102 336 276 199 39 chr5 198839588 198839976 -4245556 - L2 LINE L2 -22 3291 2842 326 348 43 7 chr5 198842330 198842468 -4243064 - L2 LINE L2 -7 3306 3164 1218 99 58 0 chr5 198842474 198842721 -4242811 - AluYa5 SINE Alu 0 355 99 1425 105 0 0 chr5 198842730 198842911 -4242621 - AluSg SINE Alu -129 181 1 351 294 91 7 chr5 198842917 198843060 -4242472 - L2 LINE L2 -164 3149 2995 371 295 299 19 chr5 198843859 198844130 -4241402 + L2 LINE L2 2925 3271 -42 243 0 0 0 chr5 198844151 198844178 -4241354 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 266 340 21 0 chr5 198844334 198844431 -4241101 - MIR SINE MIR -114 148 50 348 289 64 59 chr5 198845000 198845187 -4240345 + L2 LINE L2 3120 3307 -6 1519 253 47 28 chr5 198845188 198845694 -4239838 + MER113 DNA MER1_type? 4 519 -2 243 287 103 0 chr5 198845752 198845839 -4239693 - MER91A DNA MER1_type -6 190 95 251 276 138 26 chr5 198846327 198846479 -4239053 - MLT1K LTR MaLR -8 580 412 441 271 111 10 chr5 198846686 198846893 -4238639 - MLT1K LTR MaLR -357 231 4 307 277 119 10 chr5 198847406 198847507 -4238025 - MIR SINE MIR -114 148 37 311 305 95 0 chr5 198847862 198847957 -4237575 + MIR SINE MIR 47 150 -58 281 355 102 25 chr5 198848194 198848391 -4237141 - MIR SINE MIR -43 219 8 375 312 7 7 chr5 198849032 198849170 -4236362 - MIR3 SINE MIR -8 200 63 575 293 161 34 chr5 198849978 198850327 -4235205 + MLT1K LTR MaLR 77 380 -208 2390 82 0 0 chr5 198850327 198850642 -4234890 - AluSg SINE Alu 0 315 1 243 0 0 0 chr5 198850647 198850674 -4234858 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1601 170 29 4 chr5 198850674 198850950 -4234582 - AluJb SINE Alu -27 285 3 575 293 161 34 chr5 198850950 198851039 -4234493 + MLT1K LTR MaLR 382 580 -8 1716 153 30 17 chr5 198851434 198851711 -4233821 + AluJo SINE Alu 1 284 -28 342 0 0 0 chr5 198851711 198851749 -4233783 + (CA)n Simple_repeat Simple_repeat 1 38 0 1716 153 30 17 chr5 198851749 198851771 -4233761 + AluJo SINE Alu 284 304 -8 885 291 108 17 chr5 198851885 198852291 -4233241 + MLT1K LTR MaLR 143 585 -3 247 282 71 0 chr5 198852748 198852833 -4232699 - MER91C DNA MER1_type -2 138 48 309 155 0 0 chr5 198853081 198853139 -4232393 + CT-rich Low_complexity Low_complexity 1 58 0 276 324 35 9 chr5 198853459 198853593 -4231939 - MIR SINE MIR -59 149 12 441 225 42 14 chr5 198853734 198853876 -4231656 - LTR33 LTR ERVL 0 521 376 586 272 52 14 chr5 198853929 198854142 -4231390 - LTR33 LTR ERVL -278 243 23 1914 187 54 48 chr5 198854151 198854653 -4230879 - MLT1D LTR MaLR 0 505 1 282 271 31 31 chr5 198854744 198854840 -4230692 - MLT1G LTR MaLR 0 590 495 852 215 72 67 chr5 198856058 198856100 -4229432 - MER58A DNA MER1_type -2196 224 184 2489 80 3 0 chr5 198856100 198856399 -4229133 + AluSp SINE Alu 6 305 -8 852 215 72 67 chr5 198856399 198856579 -4228953 - MER58A DNA MER1_type -2236 184 1 549 214 223 38 chr5 198856590 198856828 -4228704 + Charlie8 DNA MER1_type 4 285 -2132 1351 194 167 25 chr5 198856895 198857303 -4228229 - MLT1C LTR MaLR -1 466 1 2191 107 0 0 chr5 198857620 198857925 -4227607 - AluSx SINE Alu 0 305 1 243 200 67 0 chr5 198858172 198858232 -4227300 + MLT1H LTR MaLR 4 67 -482 1418 201 60 0 chr5 198858436 198858501 -4227031 + MER47A DNA MER2_type 28 88 -2235 2258 97 0 0 chr5 198858501 198858789 -4226743 - AluSp SINE Alu -25 288 1 1418 201 60 0 chr5 198858789 198859042 -4226490 + MER47A DNA MER2_type 88 365 -1 382 275 100 42 chr5 198859128 198859248 -4226284 - MIR3 SINE MIR -67 141 15 249 33 0 0 chr5 198859281 198859311 -4226221 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 330 282 40 88 chr5 198859356 198859583 -4225949 - L2 LINE L2 -94 3178 2963 289 317 20 0 chr5 198859813 198859914 -4225618 + MIR3 SINE MIR 85 187 -21 291 373 28 16 chr5 198860518 198860770 -4224762 + L1MC/D LINE L1 5552 5806 -2002 405 281 163 13 chr5 198860929 198861061 -4224471 - MLT1D LTR MaLR -7 498 339 2065 103 3 52 chr5 198861061 198861371 -4224161 - AluSx SINE Alu -17 295 1 405 281 163 13 chr5 198861371 198861391 -4224141 - MLT1D LTR MaLR -166 339 323 * 611 275 16 0 chr5 198861381 198861570 -4223962 + MLT2B1 LTR ERVL 10 201 -319 656 148 0 0 chr5 198861570 198861671 -4223861 - LTR12 LTR ERV1 -133 581 481 236 239 57 11 chr5 198861672 198861760 -4223772 - LTR30 LTR ERV1 -79 643 552 1337 123 0 72 chr5 198861760 198862011 -4223521 - LTR12 LTR ERV1 -429 285 53 236 231 0 0 chr5 198862011 198862063 -4223469 - LTR30 LTR ERV1 -670 52 1 460 217 159 45 chr5 198862147 198862306 -4223226 + MLT2D LTR ERVL 240 372 -42 243 0 0 0 chr5 198862306 198862333 -4223199 + (TG)n Simple_repeat Simple_repeat 1 27 0 460 217 159 45 chr5 198862333 198862382 -4223150 + MLT2D LTR ERVL 372 414 0 762 226 135 40 chr5 198862382 198862678 -4222854 - MLT1D LTR MaLR -164 341 18 2326 92 0 7 chr5 198863564 198863869 -4221663 - AluSp SINE Alu -10 303 1 184 246 246 0 chr5 198864726 198864783 -4220749 - L2 LINE L2 -5 3267 3197 737 270 232 22 chr5 198864823 198865193 -4220339 + L2 LINE L2 2848 3295 -18 556 105 0 0 chr5 198865194 198865270 -4220262 - MADE1 DNA Mariner -2 78 3 2191 132 3 0 chr5 198865273 198865577 -4219955 - AluSp SINE Alu -8 305 1 269 232 203 49 chr5 198866286 198866496 -4219036 + MIR SINE MIR 19 250 -12 297 151 0 0 chr5 198866561 198866614 -4218918 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 1039 295 25 28 chr5 198866710 198867144 -4218388 - L1MC4a LINE L1 -1778 6030 5598 327 244 157 35 chr5 198867161 198867276 -4218256 + L1MC5 LINE L1 7779 7907 -54 2212 119 3 3 chr5 198867281 198867591 -4217941 + AluSg SINE Alu 1 310 0 9789 164 99 29 chr5 198867601 198869880 -4215652 + L1MCa LINE L1 1 2439 -3987 3212 155 61 18 chr5 198869880 198870488 -4215044 + L1MC1 LINE L1 5700 6333 0 1602 122 123 96 chr5 198870493 198870948 -4214584 + L1MB3 LINE L1 5483 5939 -229 2358 85 0 0 chr5 198871301 198871623 -4213909 + AluSp SINE Alu 1 322 0 1819 175 19 40 chr5 198871623 198872000 -4213532 + L1MC1 LINE L1 5965 6333 0 725 203 121 10 chr5 198872005 198872212 -4213320 + L1MC1 LINE L1 6098 6327 -6 360 261 172 0 chr5 198872229 198872363 -4213169 - L1MC/D LINE L1 -2194 5597 5441 2780 225 62 8 chr5 198872398 198873141 -4212391 - L1ME3A LINE L1 -8 6162 5380 452 232 121 23 chr5 198873147 198873362 -4212170 - L1MC/D LINE L1 -682 5471 5227 1975 130 0 11 chr5 198873362 198873646 -4211886 + AluSx SINE Alu 1 281 -31 452 232 121 23 chr5 198873646 198873724 -4211808 - L1MC/D LINE L1 -926 5227 5158 1073 137 7 0 chr5 198873761 198873914 -4211618 - AluSx SINE Alu -158 154 1 1574 232 89 71 chr5 198873922 198874178 -4211354 - L1MC/D LINE L1 -960 5169 4919 2491 66 3 10 chr5 198874178 198874479 -4211053 + AluY SINE Alu 1 299 -12 1574 232 89 71 chr5 198874479 198874954 -4210578 - L1MC/D LINE L1 -1210 4919 4425 3657 248 92 69 chr5 198874972 198875952 -4209580 - L1MEc LINE L1 -1905 4224 3268 1533 181 63 36 chr5 198875952 198876255 -4209277 + AluJo SINE Alu 2 312 0 3657 248 92 69 chr5 198876255 198876553 -4208979 - L1MEc LINE L1 -2861 3268 2978 3318 100 2 0 chr5 198876553 198877014 -4208518 - L1PA14 LINE L1 0 6161 5700 3657 248 92 69 chr5 198877014 198878139 -4207393 - L1MEc LINE L1 -3151 2978 1789 767 274 85 55 chr5 198878159 198878589 -4206943 - L1MEc LINE L1 -4584 1726 1310 2102 115 0 56 chr5 198878589 198878912 -4206620 - AluSx SINE Alu -5 307 3 767 274 85 55 chr5 198878912 198879093 -4206439 - L1MEc LINE L1 -5000 1310 1091 1772 173 3 40 chr5 198879093 198879416 -4206116 - AluJo SINE Alu -1 311 1 767 274 85 55 chr5 198879416 198879463 -4206069 - L1MEc LINE L1 -5219 1091 1047 1107 229 43 40 chr5 198879583 198880425 -4205107 - L1ME1 LINE L1 -4 6162 5175 1834 219 59 63 chr5 198880443 198880725 -4204807 - L1ME1 LINE L1 -5 6161 5880 1547 180 62 4 chr5 198880725 198880997 -4204535 + AluJo SINE Alu 1 288 -24 1834 219 59 63 chr5 198880997 198881303 -4204229 - L1ME1 LINE L1 -286 5880 5575 2012 171 86 113 chr5 198881306 198882094 -4203438 - L1ME1 LINE L1 -960 5186 4420 309 224 147 28 chr5 198882101 198882244 -4203288 - L1MEc LINE L1 -5196 923 764 238 226 75 0 chr5 198882391 198882444 -4203088 - L1MEc LINE L1 -5490 629 573 2780 184 21 8 chr5 198882603 198883114 -4202418 - L1MB3 LINE L1 -7 6176 5659 329 311 8 16 chr5 198883287 198883409 -4202123 - L1MEc LINE L1 -5946 173 53 361 324 41 53 chr5 198883410 198883580 -4201952 - L1ME1 LINE L1 -2371 5437 5270 378 259 54 61 chr5 198883595 198883742 -4201790 + MIR3 SINE MIR 54 199 -9 294 244 0 55 chr5 198883967 198884094 -4201438 + MER113 DNA MER1_type? 6 125 -396 225 380 116 14 chr5 198884845 198885061 -4200471 - L2 LINE L2 0 3272 3035 630 272 59 0 chr5 198887221 198887423 -4198109 + MLT1K LTR MaLR 371 584 -4 1829 85 0 151 chr5 198887548 198887912 -4197620 + AluSg1 SINE Alu 1 309 0 432 0 0 0 chr5 198888877 198888925 -4196607 + (CA)n Simple_repeat Simple_repeat 2 49 0 419 316 107 19 chr5 198889384 198889590 -4195942 - MIR SINE MIR -34 228 5 182 326 71 41 chr5 198889740 198889838 -4195694 + L2 LINE L2 3156 3256 -16 214 364 91 0 chr5 198890264 198890363 -4195169 + MIR SINE MIR 122 229 -33 25 83 0 0 chr5 198891053 198891113 -4194419 + GC_rich Low_complexity Low_complexity 1 60 0 488 249 28 40 chr5 198891916 198892093 -4193439 + L2 LINE L2 2800 2974 -340 241 333 152 0 chr5 198892131 198892263 -4193269 + L2 LINE L2 3113 3264 -49 477 214 86 0 chr5 198892484 198892601 -4192931 - MIR SINE MIR -97 165 39 246 297 28 82 chr5 198892664 198892846 -4192686 - MER5A DNA MER1_type -1 188 17 289 359 19 0 chr5 198895259 198895362 -4190170 - MIR SINE MIR -71 137 33 387 228 154 16 chr5 198895755 198895878 -4189654 + MIR SINE MIR 51 190 -72 227 311 0 0 chr5 198896340 198896401 -4189131 + MIR SINE MIR 45 105 -103 585 284 12 6 chr5 198896761 198896930 -4188602 + MLT1K LTR MaLR 102 271 -317 254 302 0 0 chr5 198898196 198898259 -4187273 - MIR SINE MIR -25 237 175 691 142 0 67 chr5 198898273 198898407 -4187125 + AluJo SINE Alu 12 136 -176 597 291 7 0 chr5 198898409 198898557 -4186975 - MIR SINE MIR -94 168 20 382 353 6 48 chr5 198898675 198898842 -4186690 - MIR SINE MIR -82 180 21 781 208 13 0 chr5 198898899 198899048 -4186484 - L1MD2 LINE L1 -13 6346 6196 655 268 156 0 chr5 198899050 198899281 -4186251 - L1MD2 LINE L1 -217 6142 5876 204 246 16 49 chr5 198899302 198899363 -4186169 - L2 LINE L2 -16 3297 3239 752 262 103 18 chr5 198899374 198899656 -4185876 - MLT1K LTR MaLR -19 569 264 1025 154 0 39 chr5 198899657 198899822 -4185710 + AluJo SINE Alu 137 296 -16 2069 134 10 0 chr5 198899822 198900129 -4185403 + AluSg SINE Alu 1 310 0 1025 154 0 39 chr5 198900129 198900145 -4185387 + AluJo SINE Alu 296 311 -1 306 0 0 0 chr5 198900166 198900200 -4185332 + (GGGGA)n Simple_repeat Simple_repeat 3 36 0 369 278 172 48 chr5 198900201 198900410 -4185122 - MLT1K LTR MaLR -314 274 40 184 379 8 40 chr5 198900459 198900583 -4184949 - MIR3 SINE MIR -52 156 37 439 336 132 4 chr5 198901591 198901841 -4183691 + L2 LINE L2 3028 3309 -4 1277 192 106 25 chr5 198902320 198902679 -4182853 + MLT1D LTR MaLR 77 464 -41 534 162 49 56 chr5 198902684 198902826 -4182706 + L1MB2 LINE L1 6029 6169 -2 261 192 0 0 chr5 198902839 198902891 -4182641 + MLT1D LTR MaLR 454 505 0 466 260 56 0 chr5 198903021 198903172 -4182360 - MIR SINE MIR -62 146 36 679 274 42 73 chr5 198903624 198903982 -4181550 - MLT1I LTR MaLR 0 409 63 390 274 38 0 chr5 198904093 198904199 -4181333 - MER91C DNA MER1_type -4 136 27 347 206 0 0 chr5 198904426 198904494 -4181038 - MER103 DNA DNA -78 88 21 2171 128 0 3 chr5 198904495 198904808 -4180724 - AluSx SINE Alu 0 312 1 230 337 63 0 chr5 198905090 198905185 -4180347 - MIR SINE MIR -56 206 106 744 331 177 31 chr5 198905194 198906001 -4179531 - L2 LINE L2 -584 2730 1806 190 268 0 0 chr5 198906218 198906259 -4179273 + MIR SINE MIR 106 146 -116 186 43 0 0 chr5 198906511 198906534 -4178998 + (CGG)n Simple_repeat Simple_repeat 2 24 0 270 0 0 0 chr5 198906775 198906805 -4178727 + (CGGGG)n Simple_repeat Simple_repeat 1 30 0 570 209 126 37 chr5 198908239 198908454 -4177078 + Charlie8 DNA MER1_type 42 275 -2142 307 285 74 62 chr5 198909337 198909398 -4176134 + L1M4 LINE L1 3903 3962 -2184 2109 105 3 7 chr5 198909398 198909694 -4175838 + AluSx SINE Alu 2 296 -16 307 285 74 62 chr5 198909694 198909874 -4175658 + L1M4 LINE L1 3962 4147 -1999 198 323 40 16 chr5 198910891 198911015 -4174517 - L2 LINE L2 -1641 1673 1547 1049 274 52 44 chr5 198911019 198911478 -4174054 - LTR16C LTR ERVL -26 465 3 293 333 170 0 chr5 198911619 198911790 -4173742 + MIR SINE MIR 13 212 -50 358 279 71 0 chr5 198911794 198911948 -4173584 + MLT1K LTR MaLR 1 165 -423 270 0 0 0 chr5 198912417 198912447 -4173085 + (CA)n Simple_repeat Simple_repeat 1 30 0 42 0 0 0 chr5 198912856 198912898 -4172634 + AT_rich Low_complexity Low_complexity 1 42 0 547 265 24 42 chr5 198913006 198913222 -4172310 - MIR SINE MIR -32 230 22 195 238 25 88 chr5 198915105 198915185 -4170347 - MIR SINE MIR -110 152 78 1101 137 0 12 chr5 198915212 198915415 -4170117 + AluSg/x SINE Alu 115 315 0 258 285 123 46 chr5 198916418 198916562 -4168970 + MIR SINE MIR 42 204 -58 1086 173 105 4 chr5 198916589 198916837 -4168695 + L1ME1 LINE L1 5653 5925 -241 2110 253 75 5 chr5 198916853 198917442 -4168090 + MER82 DNA MER2_type 23 652 -1 544 227 91 15 chr5 198917483 198917681 -4167851 + L1ME1 LINE L1 5949 6161 -5 1554 150 0 12 chr5 198919849 198920096 -4165436 - AluJo SINE Alu -15 297 54 274 361 71 40 chr5 198921558 198921854 -4163678 + L2 LINE L2 2915 3219 -53 244 327 77 0 chr5 198921866 198922034 -4163498 - L2 LINE L2 -887 2427 2247 411 255 123 10 chr5 198922107 198922311 -4163221 - Charlie8 DNA MER1_type -2015 402 176 566 268 191 21 chr5 198922314 198922650 -4162882 - L2 LINE L2 -1 3312 2920 884 138 7 7 chr5 198922688 198922826 -4162706 - AluJb SINE Alu -16 296 159 402 159 0 0 chr5 198922830 198922893 -4162639 + FLAM SINE Alu 59 121 -22 299 275 79 74 chr5 198922960 198923030 -4162502 - Charlie8 DNA MER1_type -151 190 122 2232 107 3 0 chr5 198923030 198923330 -4162202 - AluSp SINE Alu -11 302 2 299 275 79 74 chr5 198923330 198923393 -4162139 - Charlie8 DNA MER1_type -219 122 53 2029 134 3 3 chr5 198923393 198923692 -4161840 - AluSx SINE Alu -13 299 1 299 275 79 74 chr5 198923692 198923746 -4161786 - Charlie8 DNA MER1_type -288 53 1 1378 185 50 74 chr5 198923820 198924118 -4161414 + AluJo SINE Alu 3 293 -9 356 261 33 83 chr5 198924657 198924837 -4160695 + Charlie8 DNA MER1_type 33 203 -2214 1444 158 21 4 chr5 198924942 198925183 -4160349 - AluJo SINE Alu -10 302 58 437 279 54 50 chr5 198925483 198925705 -4159827 - MIR SINE MIR 0 262 40 321 295 81 90 chr5 198926801 198926921 -4158611 + L2 LINE L2 2949 3069 -244 2249 70 44 0 chr5 198926921 198927219 -4158313 - AluY SINE Alu 0 311 1 321 295 81 90 chr5 198927219 198927420 -4158112 + L2 LINE L2 3069 3267 -46 403 310 49 8 chr5 198927686 198927849 -4157683 + MIR SINE MIR 20 191 -17 298 263 13 0 chr5 198928317 198928393 -4157139 - Charlie8 DNA MER1_type -2338 79 3 439 297 167 23 chr5 198931414 198931768 -4153764 + L2 LINE L2 2887 3291 -22 221 138 0 108 chr5 198933521 198933586 -4151946 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 270 247 63 86 chr5 198933789 198933913 -4151619 + MER5A DNA MER1_type 15 144 -45 2281 71 0 0 chr5 198933913 198934208 -4151324 + AluSc SINE Alu 1 295 -14 270 247 63 86 chr5 198934208 198934242 -4151290 + MER5A DNA MER1_type 144 177 -12 228 135 0 0 chr5 198934662 198934699 -4150833 + (A)n Simple_repeat Simple_repeat 1 37 0 234 312 0 7 chr5 198935193 198935331 -4150201 + (TG)n Simple_repeat Simple_repeat 1 137 0 589 307 113 42 chr5 198936274 198936821 -4148711 + MLT1K LTR MaLR 3 588 0 493 311 170 22 chr5 198938725 198939037 -4146495 - L2 LINE L2 -60 3253 2896 2439 83 3 0 chr5 198939118 198939430 -4146102 + AluSp SINE Alu 1 313 0 478 158 10 69 chr5 198939908 198940009 -4145523 + MIR SINE MIR 58 152 -110 370 279 100 6 chr5 198940035 198940192 -4145340 - MIR SINE MIR -64 144 22 23 33 0 0 chr5 198941597 198941627 -4143905 + GC_rich Low_complexity Low_complexity 1 30 0 1496 128 27 16 chr5 198944037 198944295 -4141237 - AluSp SINE Alu -52 261 1 539 206 103 91 chr5 198944297 198944364 -4141168 + L1ME3A LINE L1 5911 5976 -194 1938 130 7 14 chr5 198944364 198944656 -4140876 + AluSx SINE Alu 1 290 -22 539 206 103 91 chr5 198944656 198944689 -4140843 + L1ME3A LINE L1 5976 6007 -163 440 214 234 28 chr5 198944689 198944834 -4140698 + MER96 DNA MER1_type 1 175 0 539 206 103 91 chr5 198944834 198944984 -4140548 + L1ME3A LINE L1 6007 6165 -5 749 150 0 0 chr5 198945004 198945117 -4140415 + FLAM_A SINE Alu 20 132 -10 222 385 36 0 chr5 198945118 198945201 -4140331 + MIR SINE MIR 61 146 -62 541 237 89 30 chr5 198945580 198945749 -4139783 + MIR SINE MIR 84 262 0 2470 73 0 3 chr5 198945780 198946093 -4139439 + AluSq SINE Alu 1 312 -1 934 180 17 6 chr5 198946509 198946687 -4138845 + MER5A DNA MER1_type 4 183 -6 374 339 17 0 chr5 198946710 198946828 -4138704 - MIR SINE MIR -95 167 48 809 243 169 21 chr5 198947000 198947337 -4138195 + L2 LINE L2 2922 3308 -5 252 0 0 0 chr5 198947595 198947623 -4137909 + (TG)n Simple_repeat Simple_repeat 2 29 0 332 321 190 7 chr5 198948324 198948461 -4137071 - MIR SINE MIR -88 174 13 207 156 0 0 chr5 198948491 198948523 -4137009 + G-rich Low_complexity Low_complexity 5 36 0 224 239 108 46 chr5 198949016 198949146 -4136386 - L2 LINE L2 -1 3271 3134 336 233 237 30 chr5 198949606 198949876 -4135656 + L2 LINE L2 2553 2878 -436 201 379 10 10 chr5 198950109 198950212 -4135320 + MIR SINE MIR 158 260 -2 225 277 12 12 chr5 198951148 198951231 -4134301 + C-rich Low_complexity Low_complexity 3 85 0 234 257 57 0 chr5 198951257 198951362 -4134170 + (CTGGGG)n Simple_repeat Simple_repeat 2 112 0 414 269 28 50 chr5 198951685 198951826 -4133706 + MIR SINE MIR 13 150 -112 370 251 118 118 chr5 198951825 198952267 -4133265 - L2 LINE L2 -5 3308 2867 * 303 304 39 34 chr5 198952387 198952591 -4132941 - L2 LINE L2 -186 3086 2882 957 345 19 15 chr5 198952652 198953063 -4132469 + L1MC4a LINE L1 5514 5926 -1882 229 273 28 21 chr5 198953070 198953213 -4132319 + (TA)n Simple_repeat Simple_repeat 1 144 0 2277 98 3 0 chr5 198953214 198953519 -4132013 - AluSx SINE Alu -6 306 1 411 255 103 78 chr5 198953704 198953908 -4131624 + LTR67 LTR ERVL 16 224 -333 240 188 0 21 chr5 198954241 198954289 -4131243 - MIR SINE MIR -110 152 106 306 368 32 0 chr5 198955556 198955711 -4129821 + MIR3 SINE MIR 43 202 -6 255 308 150 27 chr5 198957452 198957571 -4127961 - L1MC4a LINE L1 -1573 6235 6132 2092 117 0 7 chr5 198957571 198957871 -4127661 + AluSx SINE Alu 1 298 -14 255 308 150 27 chr5 198957871 198958085 -4127447 - L1MC4a LINE L1 -1676 6132 5861 439 243 32 142 chr5 198958114 198958332 -4127200 + L1MC4a LINE L1 5676 5869 -1939 26 101 0 0 chr5 198958431 198958520 -4127012 + AT_rich Low_complexity Low_complexity 1 89 0 281 298 29 0 chr5 198958609 198958713 -4126819 - LTR67 LTR ERVL -27 530 424 2014 132 0 7 chr5 198959352 198959655 -4125877 + AluJo SINE Alu 1 301 -11 597 299 237 10 chr5 198960053 198960441 -4125091 + L2 LINE L2 2837 3312 -1 531 303 49 22 chr5 198961416 198961736 -4123796 + L1ME LINE L1 5380 5705 -416 291 364 85 0 chr5 198961809 198961938 -4123594 + MIR SINE MIR 123 262 0 194 367 41 59 chr5 198961956 198962125 -4123407 + L3 LINE CR1 510 675 -902 2206 61 22 4 chr5 198962291 198962591 -4122941 - AluY SINE Alu 0 306 2 299 330 68 0 chr5 198962626 198962744 -4122788 + L2 LINE L2 3137 3262 -10 2036 106 3 50 chr5 198963498 198963818 -4121714 - AluSx SINE Alu -7 305 1 513 302 50 0 chr5 198964059 198964241 -4121291 + MER58 DNA MER1_type 5 195 -2225 270 80 80 20 chr5 198964334 198964384 -4121148 + MADE1 DNA Mariner 2 45 -35 228 293 114 16 chr5 198964398 198964521 -4121011 + L2 LINE L2 3138 3272 0 764 212 22 0 chr5 198965591 198966093 -4119439 + (TGGA)n Simple_repeat Simple_repeat 1 513 0 233 299 35 0 chr5 198967910 198967997 -4117535 - MLT1K LTR MaLR -3 585 496 2119 134 0 3 chr5 198968191 198968504 -4117028 - AluJo SINE Alu 0 312 1 2389 231 91 16 chr5 198968541 198968795 -4116737 + L1MB8 LINE L1 5455 5689 -489 1325 182 70 79 chr5 198968795 198969007 -4116525 - MER47A DNA MER2_type -1957 366 157 1948 134 43 0 chr5 198969007 198969306 -4116226 - AluSx SINE Alu 0 312 1 1325 182 70 79 chr5 198969306 198969462 -4116070 - MER47A DNA MER2_type -2166 157 1 2389 231 91 16 chr5 198969462 198969875 -4115657 + L1MB8 LINE L1 5689 6172 -6 181 91 68 0 chr5 198969877 198969921 -4115611 + (GTTTG)n Simple_repeat Simple_repeat 3 49 0 1781 134 57 13 chr5 198970969 198971268 -4114264 + AluJo SINE Alu 1 312 0 359 111 0 2 chr5 198973057 198973116 -4112416 + Alu SINE Alu 1 52 -249 269 293 122 8 chr5 198974333 198974456 -4111076 - MLT1K LTR MaLR -25 563 427 304 139 56 28 chr5 198974461 198974533 -4110999 + L1MB2 LINE L1 6097 6170 -1 1915 160 3 6 chr5 198974538 198974851 -4110681 + AluJb SINE Alu 1 312 0 268 282 86 52 chr5 198974931 198975105 -4110427 + L2 LINE L2 3002 3181 -132 1370 96 9 9 chr5 198975130 198975348 -4110184 - pTR5 LTR ERV1 -2044 394 177 347 235 7 9 chr5 198975352 198975455 -4110077 - LTR30 LTR ERV1 -98 624 375 985 105 0 31 chr5 198975455 198975617 -4109915 - pTR5 LTR ERV1 -413 2025 1869 290 155 0 0 chr5 198975615 198975673 -4109859 - pTR5 LTR ERV1 -1626 812 755 * 450 264 47 8 chr5 198975673 198975802 -4109730 + L2 LINE L2 3180 3313 0 259 267 56 11 chr5 198975812 198975902 -4109630 - MLT1K LTR MaLR -162 426 333 415 320 51 21 chr5 198976007 198976241 -4109291 - MLT1K LTR MaLR -328 260 20 1139 202 40 43 chr5 198976303 198976376 -4109156 + MLT1A1 LTR MaLR 21 93 -272 2154 96 3 3 chr5 198976376 198976667 -4108865 + AluSx SINE Alu 2 292 -20 1139 202 40 43 chr5 198976667 198976939 -4108593 + MLT1A1 LTR MaLR 93 365 0 641 299 76 4 chr5 198977133 198977397 -4108135 + L1ME4a LINE L1 5619 5901 -220 22 0 0 0 chr5 198978044 198978066 -4107466 + AT_rich Low_complexity Low_complexity 1 22 0 921 264 42 84 chr5 198978219 198978598 -4106934 + MLT1A1 LTR MaLR 1 363 -2 267 283 40 75 chr5 198978973 198979199 -4106333 - LTR67 LTR ERVL -296 261 44 2202 265 197 40 chr5 198979287 198979356 -4106176 + HAL1 LINE L1 15 72 -2435 1624 162 16 36 chr5 198979356 198979665 -4105867 - AluJo SINE Alu -7 305 3 2202 265 197 40 chr5 198979665 198980402 -4105130 + HAL1 LINE L1 72 692 -1815 1999 139 3 0 chr5 198980402 198980733 -4104799 + AluSx SINE Alu 1 312 0 2202 265 197 40 chr5 198980733 198981516 -4104016 + HAL1 LINE L1 692 1854 -653 2115 118 3 0 chr5 198981703 198982000 -4103532 + AluSx SINE Alu 1 298 -14 326 264 96 8 chr5 198983023 198983148 -4102384 - MIR3 SINE MIR -62 146 11 284 333 85 23 chr5 198983626 198983803 -4101729 - MIR3 SINE MIR -20 188 1 213 39 0 0 chr5 198983918 198983944 -4101588 + (TCC)n Simple_repeat Simple_repeat 1 26 0 241 219 110 0 chr5 198984258 198984331 -4101201 - L2 LINE L2 -11 3261 3181 672 123 74 49 chr5 198984574 198984696 -4100836 - FLAM_C SINE Alu -16 127 3 266 300 33 0 chr5 198984708 198984798 -4100734 + Charlie8 DNA MER1_type 72 164 -2253 591 293 126 0 chr5 198984914 198985129 -4100403 + MIR SINE MIR 15 256 -6 268 323 52 0 chr5 198985362 198985458 -4100074 - L2 LINE L2 -4 3268 3168 599 206 85 85 chr5 198985580 198985700 -4099832 - MER5A DNA MER1_type 0 189 67 1439 189 62 3 chr5 198985700 198985874 -4099658 - AluJb SINE Alu -4 308 109 222 37 0 0 chr5 198985874 198985901 -4099631 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 1439 189 62 3 chr5 198985901 198986017 -4099515 - AluJb SINE Alu -203 109 1 599 206 85 85 chr5 198986017 198986085 -4099447 - MER5A DNA MER1_type -121 68 1 344 329 194 19 chr5 198986101 198986577 -4098955 - L2 LINE L2 -239 3033 2482 1551 204 128 13 chr5 198986584 198987046 -4098486 - MLT1G1 LTR MaLR 0 595 81 1481 181 23 36 chr5 198987114 198987418 -4098114 - AluJo SINE Alu -12 300 1 659 262 189 33 chr5 198987727 198987953 -4097579 + L2 LINE L2 2508 2697 -616 1874 110 0 84 chr5 198987953 198988289 -4097243 + AluSq SINE Alu 1 310 0 659 262 189 33 chr5 198988289 198988603 -4096929 + L2 LINE L2 2697 3144 -169 380 274 20 10 chr5 198988608 198988710 -4096822 - L2 LINE L2 -1 3312 3210 * 1375 285 223 27 chr5 198988706 198989603 -4095929 + L2 LINE L2 2110 3232 -81 2130 119 0 0 chr5 198989603 198989896 -4095636 - AluSx SINE Alu -19 293 1 1375 285 223 27 chr5 198989896 198989967 -4095565 + L2 LINE L2 3232 3288 -25 244 298 12 12 chr5 198989968 198990052 -4095480 - L2 LINE L2 -1362 1952 1869 417 307 7 52 chr5 198990058 198990211 -4095321 + L2 LINE L2 3159 3304 -9 458 291 121 0 chr5 198990220 198990361 -4095171 + MIR SINE MIR 94 251 -11 2263 115 0 0 chr5 198990936 198991248 -4094284 + AluSx SINE Alu 1 312 0 717 252 39 26 chr5 198991265 198991495 -4094037 + MLT1J LTR MaLR 229 461 -50 303 306 89 8 chr5 198991558 198991682 -4093850 + L2 LINE L2 2926 3059 -213 505 304 20 10 chr5 198991821 198992025 -4093507 + L2 LINE L2 2032 2237 -1077 963 189 118 50 chr5 198992049 198992085 -4093447 - MER63 DNA MER1_type -28 1034 1002 2396 88 0 0 chr5 198992085 198992393 -4093139 + AluSg SINE Alu 1 308 -2 963 189 118 50 chr5 198992393 198992695 -4092837 - MER63 DNA MER1_type -60 1002 673 582 324 135 35 chr5 198992771 198993252 -4092280 + L2 LINE L2 2233 2761 -553 411 155 36 12 chr5 198993357 198993441 -4092091 - LTR67 LTR ERVL -8 549 464 860 150 0 0 chr5 198993443 198993570 -4091962 + AluJo SINE Alu 1 127 -185 905 179 0 26 chr5 198993649 198993805 -4091727 + AluJo SINE Alu 131 282 -30 282 29 0 0 chr5 198993808 198993843 -4091689 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 444 303 56 10 chr5 198993843 198994038 -4091494 - LTR67 LTR ERVL -79 478 275 1395 257 179 21 chr5 198994312 198995134 -4090398 - L2 LINE L2 -2 3311 2350 278 283 57 9 chr5 198995169 198995275 -4090257 + L2 LINE L2 2278 2388 -926 180 333 20 49 chr5 198995404 198995506 -4090026 + L2 LINE L2 3173 3271 -1 236 345 48 14 chr5 198995514 198995659 -4089873 + L2 LINE L2 2608 2757 -557 698 247 72 99 chr5 198995672 198995872 -4089660 + MER102a DNA MER1_type 8 197 -1220 2190 99 3 13 chr5 198995872 198996186 -4089346 - AluSx SINE Alu -1 311 1 698 247 72 99 chr5 198996186 198996317 -4089215 + MER102a DNA MER1_type 197 330 0 2011 60 89 21 chr5 198996420 198996702 -4088830 + AluSp SINE Alu 5 305 -8 215 294 157 0 chr5 198996712 198996814 -4088718 - L2 LINE L2 -495 2819 2702 21 0 0 0 chr5 198999328 198999349 -4086183 + GC_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr5 198999834 198999876 -4085656 + GC_rich Low_complexity Low_complexity 1 42 0 328 304 62 0 chr5 199001626 199001738 -4083794 - MIR SINE MIR -37 225 107 395 319 25 31 chr5 199002213 199002376 -4083156 + MIR3 SINE MIR 22 183 -25 354 207 5 173 chr5 199003330 199003538 -4081994 + MER5B DNA MER1_type 1 173 -5 521 292 118 0 chr5 199003701 199003879 -4081653 - MIR SINE MIR -15 247 49 874 168 6 6 chr5 199004146 199004845 -4080687 + (CCA)n Simple_repeat Simple_repeat 1 699 0 829 94 0 53 chr5 199004846 199005069 -4080463 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 648 190 11 17 chr5 199005089 199005263 -4080269 + (CACCAT)n Simple_repeat Simple_repeat 1 173 0 374 338 97 0 chr5 199005671 199005816 -4079716 - MIR SINE MIR -80 182 24 375 320 100 4 chr5 199005823 199006048 -4079484 - MIR3 SINE MIR 0 262 15 285 188 0 0 chr5 199006928 199006976 -4078556 - MER91A DNA MER1_type -148 48 1 268 203 94 0 chr5 199008123 199008187 -4077345 - MIR SINE MIR -84 178 109 2141 95 3 3 chr5 199008498 199008807 -4076725 - AluSp SINE Alu 0 309 1 271 245 52 0 chr5 199009390 199009476 -4076056 - MIR SINE MIR -75 133 37 2273 123 0 0 chr5 199009476 199009785 -4075747 + AluSx SINE Alu 1 309 -3 271 245 52 0 chr5 199009785 199009796 -4075736 - MIR SINE MIR -171 37 28 276 161 0 123 chr5 199010070 199010200 -4075332 + (CCCCAG)n Simple_repeat Simple_repeat 5 118 0 218 206 79 0 chr5 199010312 199010375 -4075157 - MIR SINE MIR -147 115 48 465 309 72 0 chr5 199010404 199010585 -4074947 + MIR SINE MIR 67 260 -2 518 315 79 18 chr5 199010676 199010914 -4074618 - MIR SINE MIR -3 259 8 259 138 86 0 chr5 199011904 199011962 -4073570 - MIR SINE MIR -118 144 82 396 174 193 53 chr5 199012664 199012795 -4072737 + MIR SINE MIR 36 183 -58 575 240 64 0 chr5 199012965 199013090 -4072442 + MER91B DNA MER1_type 1 133 -57 262 282 192 0 chr5 199013101 199013179 -4072353 + MIR SINE MIR 31 123 -139 1796 144 7 0 chr5 199013179 199013456 -4072076 - AluJo SINE Alu -19 293 15 937 222 4 62 chr5 199013505 199013730 -4071802 + AluJo SINE Alu 3 214 -98 298 212 59 0 chr5 199013730 199013815 -4071717 + AluJb SINE Alu 79 168 -134 657 248 177 5 chr5 199014067 199014265 -4071267 - MIR SINE MIR 0 262 31 221 362 110 31 chr5 199014797 199014924 -4070608 - L2 LINE L2 0 3313 3177 2113 92 6 29 chr5 199015027 199015341 -4070191 - AluSq SINE Alu -6 307 1 183 42 0 0 chr5 199015345 199015369 -4070163 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2237 131 0 0 chr5 199015371 199015683 -4069849 - AluSx SINE Alu 0 312 1 483 144 0 0 chr5 199015725 199015822 -4069710 + (TG)n Simple_repeat Simple_repeat 2 98 0 241 286 148 26 chr5 199015953 199016142 -4069390 + L2 LINE L2 3044 3255 -17 192 274 82 0 chr5 199016372 199016445 -4069087 - L2 LINE L2 -52 3261 3183 354 319 48 6 chr5 199016462 199016620 -4068912 + MIR SINE MIR 20 181 -63 320 291 126 13 chr5 199017077 199017228 -4068304 - MIR SINE MIR -15 247 80 543 231 39 19 chr5 199017576 199017732 -4067800 + MER53 DNA DNA 6 164 -25 207 146 0 0 chr5 199018042 199018083 -4067449 + (CA)n Simple_repeat Simple_repeat 1 41 0 2213 114 0 0 chr5 199019051 199019350 -4066182 + AluSx SINE Alu 1 299 -13 386 326 39 0 chr5 199020922 199021051 -4064481 + MIR SINE MIR 59 192 -70 640 222 13 13 chr5 199021054 199021207 -4064325 - MER2 DNA MER2_type 0 345 193 2116 106 3 23 chr5 199022171 199022473 -4063059 - AluSq SINE Alu -17 296 1 909 268 182 22 chr5 199022490 199023025 -4062507 + L2 LINE L2 2679 3274 -39 857 231 147 63 chr5 199023143 199023391 -4062141 + MLT1K LTR MaLR 50 345 -243 2181 81 0 20 chr5 199023391 199023728 -4061804 - AluSp SINE Alu 0 313 2 857 231 147 63 chr5 199023728 199023873 -4061659 + MLT1K LTR MaLR 345 476 -112 328 220 44 22 chr5 199023924 199023995 -4061537 + MLT1K LTR MaLR 439 514 -74 2402 48 0 3 chr5 199023995 199024287 -4061245 + AluY SINE Alu 1 291 -20 328 220 44 22 chr5 199024287 199024306 -4061226 + MLT1K LTR MaLR 514 531 -57 277 305 67 34 chr5 199024679 199024918 -4060614 - L2 LINE L2 -210 3103 2857 913 226 67 58 chr5 199025137 199025465 -4060067 + MLT1J LTR MaLR 105 435 -76 181 289 0 92 chr5 199025899 199025975 -4059557 + MER5A DNA MER1_type 27 95 -94 305 301 136 53 chr5 199026006 199026719 -4058813 + L2 LINE L2 2413 3308 -5 671 142 0 19 chr5 199027582 199027672 -4057860 + FLAM_C SINE Alu 35 124 -188 189 0 0 0 chr5 199027672 199027693 -4057839 + (TA)n Simple_repeat Simple_repeat 1 21 0 671 142 0 19 chr5 199027693 199027708 -4057824 + FLAM_C SINE Alu 124 138 -174 404 290 121 73 chr5 199028274 199028391 -4057141 - L2 LINE L2 -1 3312 3202 463 282 34 13 chr5 199028391 199028540 -4056992 + MER5A DNA MER1_type 25 176 -13 404 290 121 73 chr5 199028540 199028712 -4056820 - L2 LINE L2 -111 3202 2854 180 320 78 29 chr5 199029108 199029211 -4056321 + L3b LINE CR1 1209 1316 -267 963 136 0 0 chr5 199029592 199029724 -4055808 + FLAM_C SINE Alu 1 132 -1 532 199 8 8 chr5 199029724 199029855 -4055677 + GA-rich Low_complexity Low_complexity 2 132 0 601 266 204 15 chr5 199029919 199030253 -4055279 - L2 LINE L2 -3 3310 2914 349 292 23 31 chr5 199030468 199030598 -4054934 + MIR SINE MIR 9 137 -125 1726 177 3 0 chr5 199030604 199030909 -4054623 - AluJb SINE Alu -6 306 1 1026 285 95 15 chr5 199031178 199031715 -4053817 + MLT1K LTR MaLR 9 588 0 2056 99 10 3 chr5 199031993 199032287 -4053245 + THE1C LTR MaLR 80 375 0 778 235 81 8 chr5 199032433 199032667 -4052865 + MLT1K LTR MaLR 332 582 -6 474 326 158 10 chr5 199033581 199033986 -4051546 + L2 LINE L2 2848 3312 -1 623 315 46 8 chr5 199034610 199034848 -4050684 - MIR SINE MIR -10 252 6 2626 94 9 0 chr5 199034926 199035276 -4050256 - THE1A LTR MaLR 0 355 3 327 259 60 110 chr5 199036419 199036616 -4048916 - MLT1I LTR MaLR -27 382 245 2196 117 0 0 chr5 199036616 199036924 -4048608 + AluSx SINE Alu 1 308 -4 327 259 60 110 chr5 199036924 199037099 -4048433 - MLT1I LTR MaLR -164 245 63 548 274 57 28 chr5 199037516 199037728 -4047804 + MLT1K LTR MaLR 369 586 -2 1889 106 0 63 chr5 199039180 199039522 -4046010 + AluSx SINE Alu 1 323 0 363 231 13 0 chr5 199040358 199040436 -4045096 - MER63 DNA MER1_type -312 750 672 1188 254 106 20 chr5 199041348 199041754 -4043778 + LTR16C LTR ERVL 50 490 -1 525 291 118 17 chr5 199041854 199042407 -4043125 - L2 LINE L2 -124 3189 2581 1678 152 7 50 chr5 199043226 199043528 -4042004 + AluJo SINE Alu 5 293 -19 235 229 33 0 chr5 199043643 199043704 -4041828 + MIR SINE MIR 109 171 -91 692 260 200 48 chr5 199043743 199044178 -4041354 + MLT1J LTR MaLR 1 501 -10 612 303 34 8 chr5 199044704 199044938 -4040594 + MLT1K LTR MaLR 7 246 -342 232 300 114 0 chr5 199044986 199045056 -4040476 + MLT1K LTR MaLR 346 423 -165 254 277 192 24 chr5 199045156 199045448 -4040084 + L2 LINE L2 2932 3272 0 233 272 112 30 chr5 199046429 199046598 -4038934 + L2 LINE L2 2712 2894 -420 323 280 80 90 chr5 199046613 199046823 -4038709 + L2 LINE L2 2998 3206 -107 1807 135 28 3 chr5 199046823 199046943 -4038589 + AluSx SINE Alu 1 117 -195 207 0 0 0 chr5 199046943 199046966 -4038566 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 1807 135 28 3 chr5 199046966 199047133 -4038399 + AluSx SINE Alu 117 295 -17 323 280 80 90 chr5 199047133 199047233 -4038299 + L2 LINE L2 3206 3305 -8 331 261 96 58 chr5 199047356 199047638 -4037894 - MLT1L LTR MaLR -131 484 110 472 230 0 56 chr5 199048318 199048431 -4037101 + MLT1D LTR MaLR 1 106 -520 1288 264 53 94 chr5 199048431 199049167 -4036365 + MER21B LTR ERV1 1 706 -157 1423 232 61 24 chr5 199049191 199049570 -4035962 + MLT1D LTR MaLR 113 505 0 273 239 0 15 chr5 199049574 199049641 -4035891 - L2 LINE L2 -239 3074 3009 1762 159 0 7 chr5 199049791 199050107 -4035425 - AluJo SINE Alu 0 314 1 1402 208 124 0 chr5 199050115 199050461 -4035071 - L1ME LINE L1 -485 6075 5687 5217 168 215 6 chr5 199050463 199051863 -4033669 + MER52A LTR ERV1 1 1755 0 966 244 87 17 chr5 199051863 199052149 -4033383 - L1ME LINE L1 -849 5691 5376 1685 141 16 52 chr5 199052149 199052294 -4033238 + AluJb SINE Alu 1 131 -181 2361 78 0 13 chr5 199052294 199052600 -4032932 + AluY SINE Alu 1 302 -9 1685 141 16 52 chr5 199052600 199052760 -4032772 + AluJb SINE Alu 131 295 -17 966 244 87 17 chr5 199052760 199052817 -4032715 - L1ME LINE L1 -1164 5376 5324 3559 224 97 30 chr5 199052817 199054067 -4031465 - L1MDb LINE L1 -4127 2413 1055 2003 116 3 57 chr5 199054067 199054385 -4031147 - AluSx SINE Alu -11 301 1 3559 224 97 30 chr5 199054385 199054534 -4030998 - L1MDb LINE L1 -5485 1055 917 21 36 0 0 chr5 199054535 199054563 -4030969 + AT_rich Low_complexity Low_complexity 1 28 0 220 171 0 0 chr5 199054995 199055030 -4030502 + (CTG)n Simple_repeat Simple_repeat 3 37 0 232 330 115 58 chr5 199055126 199055438 -4030094 - L1MDb LINE L1 -6210 330 1 402 339 91 14 chr5 199055523 199055744 -4029788 + MIR SINE MIR 25 262 0 324 282 0 0 chr5 199056105 199056190 -4029342 + MIR SINE MIR 70 154 -108 297 289 200 0 chr5 199056285 199056420 -4029112 - MIR SINE MIR -57 205 44 1734 166 23 7 chr5 199057031 199057338 -4028194 + AluJo SINE Alu 1 312 0 403 235 76 0 chr5 199057470 199057593 -4027939 + MIR SINE MIR 59 191 -58 2099 129 0 0 chr5 199057607 199057902 -4027630 + AluSx SINE Alu 1 295 -17 409 318 8 8 chr5 199058139 199058268 -4027264 - MIR SINE MIR -59 149 21 300 264 17 96 chr5 199058559 199058737 -4026795 - Charlie8 DNA MER1_type -2155 262 166 1125 122 0 12 chr5 199158999 199159163 -3926369 - AluSg/x SINE Alu -7 303 142 2585 53 3 0 chr5 199159176 199159479 -3926053 - AluY SINE Alu -7 304 1 1220 158 118 36 chr5 199159479 199159758 -3925774 - AluSx SINE Alu -10 302 1 195 325 111 26 chr5 199160127 199160244 -3925288 - MIR SINE MIR -57 151 25 217 345 73 36 chr5 199160305 199160415 -3925117 + L2 LINE L2 3159 3272 0 1884 154 0 7 chr5 199160573 199160858 -3924674 + AluJb SINE Alu 9 291 -21 986 148 143 19 chr5 199160998 199161207 -3924325 - MER46A DNA MER2_type -1 235 1 2258 99 7 0 chr5 199162074 199162366 -3923166 - AluSx SINE Alu -18 294 1 347 205 39 26 chr5 199162421 199162499 -3923033 + L2 LINE L2 3186 3264 -49 314 150 33 0 chr5 199162519 199162579 -3922953 - L1M4 LINE L1 -2163 3983 3922 213 182 13 117 chr5 199162742 199162787 -3922745 - L2 LINE L2 -54 3259 3224 1844 185 0 7 chr5 199162787 199163084 -3922448 - AluJo SINE Alu -17 295 1 213 182 13 117 chr5 199163084 199163115 -3922417 - L2 LINE L2 -89 3224 3191 1504 30 10 41 chr5 199163141 199163338 -3922194 + L1PA7 LINE L1 5961 6151 -3 2331 103 6 3 chr5 199163405 199163717 -3921815 - AluSq SINE Alu 0 313 1 2448 75 0 0 chr5 199163747 199164039 -3921493 + AluY SINE Alu 1 292 -19 821 157 43 0 chr5 199164049 199164189 -3921343 - FRAM SINE Alu -30 146 1 2014 189 55 6 chr5 199164193 199164592 -3920940 - L1M4 LINE L1 -492 5692 5314 2006 127 24 0 chr5 199164592 199164883 -3920649 - AluSq SINE Alu -15 298 1 1761 180 0 24 chr5 199164891 199165185 -3920347 - AluJb SINE Alu -23 289 3 2014 189 55 6 chr5 199165185 199165264 -3920268 - L1M4 LINE L1 -876 5308 5174 207 0 0 0 chr5 199165267 199165290 -3920242 + (TTG)n Simple_repeat Simple_repeat 2 24 0 853 54 144 0 chr5 199165290 199165401 -3920131 - AluSc SINE Alu -182 127 1 821 230 0 0 chr5 199165427 199165588 -3919944 - AluJo SINE Alu -1 301 141 1315 178 25 38 chr5 199165591 199165911 -3919621 - L1M4 LINE L1 -954 5192 4877 907 230 135 78 chr5 199166039 199166166 -3919366 - MER77 LTR ERV1 -15 590 472 2158 125 7 0 chr5 199166166 199166469 -3919063 + AluSg SINE Alu 1 305 -5 907 230 135 78 chr5 199166469 199166579 -3918953 - MER77 LTR ERV1 -133 472 370 3819 174 43 26 chr5 199166579 199166990 -3918542 + MER44D DNA MER2_type 2 304 -2183 2288 93 0 3 chr5 199166990 199167281 -3918251 + AluSg SINE Alu 9 298 -12 3819 174 43 26 chr5 199167281 199167589 -3917943 + MER44D DNA MER2_type 304 605 0 907 230 135 78 chr5 199167589 199167835 -3917697 - MER77 LTR ERV1 -235 370 81 231 302 94 9 chr5 199167981 199168087 -3917445 - MIR SINE MIR -34 228 114 818 143 0 50 chr5 199168102 199168242 -3917290 - AluJo SINE Alu -169 133 1 192 308 77 56 chr5 199169248 199169391 -3916141 - L2 LINE L2 -8 3264 3119 1995 139 10 0 chr5 199169550 199169853 -3915679 - AluJb SINE Alu -6 306 1 2286 117 0 0 chr5 199170206 199170513 -3915019 - AluSx SINE Alu -5 307 1 1136 82 0 0 chr5 199170513 199170648 -3914884 - AluSq/x SINE Alu -177 135 1 2180 103 3 3 chr5 199170786 199171078 -3914454 - AluSx SINE Alu -5 307 16 1997 140 0 47 chr5 199171894 199172216 -3913316 - AluSx SINE Alu -4 308 2 2556 74 0 0 chr5 199172401 199172712 -3912820 + AluY SINE Alu 1 311 0 833 176 28 0 chr5 199174005 199174147 -3911385 + MER3 DNA MER1_type 2 147 -62 184 366 14 14 chr5 199175241 199175312 -3910220 + L2 LINE L2 3121 3191 -81 318 272 49 0 chr5 199175671 199175752 -3909780 - L2 LINE L2 -7 3265 3181 407 330 17 22 chr5 199176754 199176933 -3908599 - MIR SINE MIR -12 250 73 2085 100 31 53 chr5 199176933 199177252 -3908280 - AluSx SINE Alu 0 312 1 2074 124 10 3 chr5 199177916 199178215 -3907317 - AluSx SINE Alu -11 301 1 794 174 0 0 chr5 199178603 199178735 -3906797 + FLAM_A SINE Alu 2 133 0 1648 169 49 7 chr5 199179280 199179564 -3905968 + AluJo SINE Alu 1 296 -16 891 253 127 39 chr5 199179688 199180206 -3905326 - L1ME4a LINE L1 -11 6110 5547 1753 158 68 0 chr5 199180272 199180551 -3904981 + AluJb SINE Alu 1 298 -14 817 166 44 4 chr5 199180596 199180754 -3904778 + L1ME2 LINE L1 6018 6164 0 213 216 0 0 chr5 199181595 199181632 -3903900 + polypurine Low_complexity Low_complexity 3 39 0 26 50 0 0 chr5 199181675 199181715 -3903817 + AT_rich Low_complexity Low_complexity 1 40 0 815 129 9 0 chr5 199181715 199181831 -3903701 - AluSq/x SINE Alu -196 117 1 226 0 0 56 chr5 199181887 199181923 -3903609 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 474 122 0 0 chr5 199182007 199182081 -3903451 - FAM SINE Alu 0 185 112 971 209 17 0 chr5 199182017 199182189 -3903343 - FAM SINE Alu 0 175 1 593 245 101 46 chr5 199183102 199183250 -3902282 + MIR SINE MIR 13 180 -82 2099 103 26 0 chr5 199183250 199183552 -3901980 + AluSx SINE Alu 1 310 -2 593 245 101 46 chr5 199183552 199183640 -3901892 + MIR SINE MIR 180 262 0 203 339 25 32 chr5 199183772 199183897 -3901635 + MIR SINE MIR 21 143 -68 2024 118 3 10 chr5 199184164 199184461 -3901071 - AluSq SINE Alu -18 295 1 2237 96 3 10 chr5 199184703 199185016 -3900516 + AluSp SINE Alu 1 311 -2 2209 110 0 0 chr5 199185172 199185481 -3900051 + AluSg SINE Alu 1 309 -1 2189 113 0 0 chr5 199185677 199185979 -3899553 + AluSq SINE Alu 1 302 -11 835 94 0 2 chr5 199186283 199186530 -3899002 + AluSx SINE Alu 1 299 -10 738 93 84 0 chr5 199186598 199186705 -3898827 + AluSq/x SINE Alu 2 117 -195 2079 110 0 7 chr5 199186705 199186997 -3898535 + AluSg SINE Alu 1 290 -20 1241 166 5 5 chr5 199187234 199187445 -3898087 + AluJb SINE Alu 92 302 -10 2795 118 7 0 chr5 199187873 199188288 -3897244 - L1PB1 LINE L1 -2 6149 5732 296 79 0 0 chr5 199188290 199188328 -3897204 + AluY SINE Alu 1 38 -270 2171 71 7 17 chr5 199188328 199188623 -3896909 + AluY SINE Alu 17 308 -3 360 310 25 35 chr5 199188649 199188846 -3896686 + L1MC4 LINE L1 7709 7903 -139 237 65 0 0 chr5 199189093 199189124 -3896408 + (TG)n Simple_repeat Simple_repeat 2 32 0 33 25 0 0 chr5 199189455 199189495 -3896037 + AT_rich Low_complexity Low_complexity 1 40 0 429 327 36 12 chr5 199192682 199192847 -3892685 + MIR SINE MIR 40 208 -54 2333 73 0 13 chr5 199193061 199193376 -3892156 - AluY SINE Alu 0 311 1 2305 79 0 13 chr5 199193383 199193698 -3891834 - AluY SINE Alu 0 311 1 1486 80 244 0 chr5 199193698 199193936 -3891596 - AluSg1 SINE Alu -13 296 1 2001 101 42 3 chr5 199194196 199194483 -3891049 + AluSx SINE Alu 1 298 -14 1225 112 0 12 chr5 199194487 199194657 -3890875 + AluSp SINE Alu 124 291 -22 2315 99 0 6 chr5 199194826 199195140 -3890392 - AluSx SINE Alu 0 312 1 304 222 265 43 chr5 199195146 199195308 -3890224 + MIR SINE MIR 49 246 -16 2307 80 0 3 chr5 199195694 199195994 -3889538 - AluSc SINE Alu -10 299 1 1866 163 7 0 chr5 199197012 199197307 -3888225 + AluJb SINE Alu 1 297 -15 674 229 122 10 chr5 199197360 199197565 -3887967 - L1ME3 LINE L1 -1 6161 5934 2273 68 0 0 chr5 199197568 199197883 -3887649 - AluY SINE Alu 0 315 1 1107 149 87 0 chr5 199197886 199198081 -3887451 - AluJo SINE Alu -14 298 87 480 35 0 0 chr5 199198097 199198155 -3887377 + (TG)n Simple_repeat Simple_repeat 2 59 0 2223 106 0 7 chr5 199198306 199198607 -3886925 - AluSq SINE Alu -14 299 1 1517 176 30 4 chr5 199198669 199198936 -3886596 + AluSx SINE Alu 1 274 -38 306 0 0 0 chr5 199198994 199199028 -3886504 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2335 47 0 0 chr5 199199029 199199305 -3886227 - AluSx SINE Alu -36 276 1 305 298 96 55 chr5 199199313 199199605 -3885927 - L1ME3 LINE L1 -298 5823 5520 2303 85 0 0 chr5 199200113 199200408 -3885124 + AluSg1 SINE Alu 1 295 -14 1347 161 28 92 chr5 199200438 199200588 -3884944 + AluJb SINE Alu 1 159 -153 2136 92 3 14 chr5 199200588 199200902 -3884630 + AluSp SINE Alu 1 313 0 1347 161 28 92 chr5 199200902 199200967 -3884565 + AluJb SINE Alu 159 227 -85 2266 106 0 0 chr5 199200967 199201268 -3884264 - AluSx SINE Alu -11 301 1 1347 161 28 92 chr5 199201268 199201368 -3884164 + AluJb SINE Alu 227 297 -15 2061 138 3 3 chr5 199201369 199201681 -3883851 + AluSx SINE Alu 1 312 0 322 227 18 100 chr5 199201686 199201768 -3883764 - L1ME4a LINE L1 -67 6054 5982 2218 98 3 3 chr5 199201768 199202075 -3883457 - AluSx SINE Alu -5 307 1 322 227 18 100 chr5 199202075 199202102 -3883430 - L1ME4a LINE L1 -139 5982 5954 256 108 0 0 chr5 199202131 199202168 -3883364 + Alu SINE Alu 6 42 -261 1812 128 3 16 chr5 199202269 199202575 -3882957 + AluSx SINE Alu 11 312 0 180 301 35 63 chr5 199203167 199203303 -3882229 - L2 LINE L2 -182 3090 2959 456 293 0 25 chr5 199203303 199203462 -3882070 + MIR3 SINE MIR 3 156 -76 1042 164 0 0 chr5 199203487 199203652 -3881880 + FRAM SINE Alu 2 166 0 193 365 56 28 chr5 199204807 199204914 -3880618 + L2 LINE L2 3201 3310 -3 853 201 178 36 chr5 199204923 199205095 -3880437 - L1MD2 LINE L1 -8 6351 6205 188 67 33 0 chr5 199205095 199205125 -3880407 + (TG)n Simple_repeat Simple_repeat 2 32 0 853 201 178 36 chr5 199205125 199205256 -3880276 - L1MD2 LINE L1 -154 6205 6005 2045 110 3 7 chr5 199205258 199205549 -3879983 - AluSx SINE Alu -22 290 1 474 217 175 33 chr5 199205553 199205994 -3879538 - L1ME3 LINE L1 -783 5363 4964 785 186 96 5 chr5 199205995 199206194 -3879338 - L1ME3 LINE L1 -1233 4913 4697 407 76 25 25 chr5 199206194 199206273 -3879259 + (TCC)n Simple_repeat Simple_repeat 2 80 0 1791 159 23 13 chr5 199206282 199206591 -3878941 - AluJo SINE Alu 0 312 1 2316 90 0 0 chr5 199206593 199206893 -3878639 - AluSq SINE Alu -13 300 1 314 169 0 0 chr5 199206893 199206964 -3878568 - L1ME3 LINE L1 -1441 4705 4635 344 158 86 148 chr5 199206979 199207074 -3878458 - FLAM_C SINE Alu -170 132 33 1969 139 10 3 chr5 199207074 199207383 -3878149 + AluSx SINE Alu 1 311 -1 2044 110 9 31 chr5 199207386 199207522 -3878010 + AluSx SINE Alu 1 138 -174 2341 84 3 0 chr5 199207522 199207832 -3877700 + AluSx SINE Alu 1 311 -1 2044 110 9 31 chr5 199207832 199208014 -3877518 + AluSx SINE Alu 138 312 0 344 158 86 148 chr5 199208014 199208056 -3877476 - FLAM_C SINE Alu -271 31 26 875 208 44 4 chr5 199208097 199208323 -3877209 - L1ME3 LINE L1 -1538 4608 4374 957 143 0 12 chr5 199208331 199208492 -3877040 + AluJb SINE Alu 1 159 -153 831 153 8 0 chr5 199208565 199208696 -3876836 + FLAM_C SINE Alu 1 132 -11 1057 133 19 0 chr5 199208786 199208944 -3876588 - AluSg/x SINE Alu -18 294 134 2298 63 0 11 chr5 199208944 199209231 -3876301 - AluY SINE Alu -18 293 10 1017 103 0 19 chr5 199209231 199209386 -3876146 - AluSx SINE Alu -142 170 19 205 191 0 0 chr5 199209792 199209834 -3875698 + (TA)n Simple_repeat Simple_repeat 1 42 0 197 273 0 0 chr5 199214683 199214727 -3870805 + MIR SINE MIR 110 153 -109 1647 79 0 26 chr5 199215383 199215611 -3869921 + AluSc SINE Alu 87 308 -1 341 223 116 9 chr5 199216224 199216336 -3869196 - MIR SINE MIR -118 144 21 280 321 15 46 chr5 199217365 199217496 -3868036 + MER5A DNA MER1_type 62 188 -1 195 311 82 25 chr5 199217613 199217735 -3867797 - MIR SINE MIR -127 135 7 281 238 38 0 chr5 199218001 199218081 -3867451 + MIR SINE MIR 87 169 -93 236 360 11 0 chr5 199218333 199218422 -3867110 - MIR SINE MIR -63 145 56 203 294 33 33 chr5 199218540 199218632 -3866900 - MIR SINE MIR -102 160 69 240 237 13 52 chr5 199219074 199219170 -3866362 + MIR SINE MIR 77 169 -61 21 0 0 0 chr5 199220247 199220268 -3865264 + GC_rich Low_complexity Low_complexity 1 21 0 344 276 112 33 chr5 199221083 199221235 -3864297 - MIR SINE MIR -50 212 49 2235 99 0 0 chr5 199222252 199222545 -3862987 + AluSg SINE Alu 1 293 -17 220 406 0 12 chr5 199222754 199222919 -3862613 + L2 LINE L2 2915 3077 -195 430 132 15 0 chr5 199223096 199223164 -3862368 - MIR SINE MIR -62 146 78 220 368 43 25 chr5 199223223 199223386 -3862146 + L2 LINE L2 2917 3082 -190 276 219 0 16 chr5 199223697 199223761 -3861771 - Charlie8 DNA MER1_type -2220 197 135 316 313 113 0 chr5 199224095 199224210 -3861322 - MIR SINE MIR -79 183 56 243 337 16 2 chr5 199224932 199225042 -3860490 + MIR SINE MIR 51 161 -56 191 214 0 0 chr5 199225547 199225589 -3859943 + MIR SINE MIR 81 122 -86 29 108 0 15 chr5 199226018 199226213 -3859319 + GC_rich Low_complexity Low_complexity 1 192 0 21 0 0 0 chr5 199226296 199226317 -3859215 + GC_rich Low_complexity Low_complexity 1 21 0 344 247 29 41 chr5 199227181 199227298 -3858234 - L1 LINE L1 -2948 3198 3083 2108 107 10 3 chr5 199227298 199227606 -3857926 - AluSg SINE Alu 0 310 1 344 247 29 41 chr5 199227606 199227617 -3857915 - L1 LINE L1 -3063 3083 3073 195 302 0 0 chr5 199227833 199227886 -3857646 - MIR SINE MIR -69 139 87 1731 131 0 93 chr5 199227967 199228310 -3857222 - AluSx SINE Alu -1 311 1 545 279 49 15 chr5 199228425 199228629 -3856903 - MIR SINE MIR -43 219 9 355 276 127 0 chr5 199229112 199229246 -3856286 + MIR SINE MIR 58 208 -54 559 279 25 6 chr5 199229272 199229433 -3856099 - MIR SINE MIR -6 256 93 209 128 26 0 chr5 199229465 199229504 -3856028 + A-rich Low_complexity Low_complexity 4 43 0 774 159 68 0 chr5 199229508 199229640 -3855892 + FLAM_C SINE Alu 2 142 -1 2093 119 0 0 chr5 199229838 199230133 -3855399 - AluSg SINE Alu -5 305 11 1635 201 16 0 chr5 199230282 199230591 -3854941 - 7SLRNA srpRNA srpRNA -6 314 1 1576 227 39 3 chr5 199230776 199231111 -3854421 - MER7A DNA MER2_type 0 346 2 2131 118 0 13 chr5 199231322 199231636 -3853896 + AluSx SINE Alu 1 310 -2 26 111 0 0 chr5 199332347 199332464 -3753068 + GC_rich Low_complexity Low_complexity 1 117 0 1763 128 10 28 chr5 199332680 199332969 -3752563 - AluJo SINE Alu -17 295 12 2167 91 0 10 chr5 199334429 199334737 -3750795 - AluSx SINE Alu -7 305 1 219 286 36 0 chr5 199334781 199334865 -3750667 + C-rich Low_complexity Low_complexity 4 90 0 265 263 40 0 chr5 199335279 199335355 -3750177 - MIR SINE MIR -111 151 73 2360 72 0 0 chr5 199335557 199335861 -3749671 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr5 199336149 199336172 -3749360 + GC_rich Low_complexity Low_complexity 1 23 0 239 270 0 0 chr5 199336416 199336479 -3749053 + C-rich Low_complexity Low_complexity 1 63 0 1427 184 7 26 chr5 199336637 199336942 -3748590 + AluJo SINE Alu 1 299 -13 2092 86 0 27 chr5 199336989 199337290 -3748242 + AluSq SINE Alu 2 294 -19 753 302 105 38 chr5 199337306 199337704 -3747828 - L1ME4a LINE L1 -229 5892 5539 2301 69 7 0 chr5 199337704 199337993 -3747539 + AluSq SINE Alu 1 291 -22 753 302 105 38 chr5 199337993 199338281 -3747251 - L1ME4a LINE L1 -582 5539 5272 2214 111 0 0 chr5 199338512 199338818 -3746714 + AluSx SINE Alu 1 306 -6 874 254 26 60 chr5 199339002 199339190 -3746342 + MER58A DNA MER1_type 1 181 -2239 2073 112 0 3 chr5 199339190 199339485 -3746047 + AluSx SINE Alu 1 294 -18 874 254 26 60 chr5 199339485 199339528 -3746004 + MER58A DNA MER1_type 181 224 0 246 195 49 0 chr5 199341583 199341665 -3743867 + (CCCA)n Simple_repeat Simple_repeat 1 86 0 1703 174 0 10 chr5 199342561 199342859 -3742673 + 7SLRNA srpRNA srpRNA 21 315 -5 2085 120 0 16 chr5 199342860 199343176 -3742356 + AluSx SINE Alu 1 311 -1 2232 67 3 3 chr5 199343390 199343704 -3741828 - AluSq SINE Alu 0 314 1 2564 51 0 10 chr5 199344148 199344462 -3741070 + AluSq SINE Alu 1 311 -2 2222 107 0 3 chr5 199344535 199344843 -3740689 - AluSx SINE Alu -5 307 1 833 173 0 0 chr5 199344900 199345033 -3740499 + FLAM_C SINE Alu 1 133 0 333 0 0 0 chr5 199346111 199346148 -3739384 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1993 142 0 25 chr5 199346359 199346677 -3738855 + AluSx SINE Alu 3 312 0 2339 83 0 0 chr5 199346767 199347067 -3738465 + AluSx SINE Alu 5 304 -8 513 325 58 17 chr5 199347502 199347742 -3737790 + MIR SINE MIR 3 252 -10 330 324 0 70 chr5 199350049 199350234 -3735298 + MER5B DNA MER1_type 1 172 -6 2401 65 0 7 chr5 199350534 199350842 -3734690 - AluY SINE Alu -5 306 1 2170 109 3 0 chr5 199350842 199351146 -3734386 - AluSx SINE Alu -7 305 1 1193 129 0 0 chr5 199351148 199351319 -3734213 - AluSg/x SINE Alu -8 302 132 2170 74 20 3 chr5 199351319 199351616 -3733916 - AluSq SINE Alu -11 302 1 1974 135 3 0 chr5 199351622 199351918 -3733614 - AluSx SINE Alu -15 297 1 463 281 185 20 chr5 199351918 199352215 -3733317 - L2 LINE L2 -21 3292 2946 221 328 140 27 chr5 199352252 199352438 -3733094 + L3 LINE CR1 1301 1507 -70 275 259 36 98 chr5 199352562 199352601 -3732931 + MIR SINE MIR 19 59 -203 1735 127 7 55 chr5 199352601 199352757 -3732775 - AluJb SINE Alu -19 293 158 2018 115 3 20 chr5 199352757 199353061 -3732471 - AluSc SINE Alu -10 299 1 1735 127 7 55 chr5 199353061 199353212 -3732320 - AluJb SINE Alu -154 158 1 275 259 36 98 chr5 199353212 199353284 -3732248 + MIR SINE MIR 59 123 -139 2429 77 0 0 chr5 199353284 199353595 -3731937 - AluY SINE Alu 0 311 1 472 79 0 0 chr5 199353595 199353658 -3731874 - AluJo SINE Alu -15 297 235 860 171 0 0 chr5 199353658 199353798 -3731734 - AluJo SINE Alu -163 149 10 223 320 96 24 chr5 199353806 199353876 -3731656 + MIR SINE MIR 113 177 -85 1736 92 0 13 chr5 199353876 199354115 -3731417 + AluSg/x SINE Alu 66 301 -11 223 320 96 24 chr5 199354115 199354169 -3731363 + MIR SINE MIR 177 246 -16 2246 95 0 0 chr5 199354242 199354536 -3730996 - AluSg SINE Alu -16 294 1 2157 89 3 26 chr5 199354753 199355056 -3730476 - AluSx SINE Alu -3 309 14 848 254 38 45 chr5 199355095 199355359 -3730173 + L1MC4a LINE L1 6542 6803 -1005 543 317 96 11 chr5 199355377 199355648 -3729884 + L1MC4 LINE L1 7377 7670 -372 333 214 6 24 chr5 199355667 199355757 -3729775 + L1MC4 LINE L1 7904 7995 0 2092 112 24 0 chr5 199356017 199356312 -3729220 - AluSx SINE Alu -10 302 1 2121 83 14 3 chr5 199356508 199356796 -3728736 - AluSp SINE Alu -22 291 1 814 212 28 6 chr5 199356968 199357147 -3728385 + L1MD2 LINE L1 6175 6357 -2 1232 200 75 36 chr5 199357154 199357410 -3728122 + AluJo SINE Alu 1 270 -42 1811 123 0 21 chr5 199357410 199357694 -3727838 - AluSx SINE Alu -29 283 6 1232 200 75 36 chr5 199357694 199357717 -3727815 + AluJo SINE Alu 270 291 -21 1550 195 33 7 chr5 199357720 199358022 -3727510 + AluJo SINE Alu 1 310 -2 2398 73 0 0 chr5 199358111 199358411 -3727121 + AluSx SINE Alu 1 300 -12 189 0 0 0 chr5 199358411 199358432 -3727100 + (GA)n Simple_repeat Simple_repeat 2 22 0 1785 131 3 66 chr5 199358504 199358824 -3726708 + AluSx SINE Alu 1 300 -12 2135 131 0 0 chr5 199358836 199359148 -3726384 + AluSx SINE Alu 1 312 0 474 273 73 7 chr5 199359256 199359406 -3726126 + MIR SINE MIR 103 262 0 434 303 83 21 chr5 199359437 199359582 -3725950 + L3 LINE CR1 1421 1574 -3 211 313 0 0 chr5 199359584 199359651 -3725881 + GA-rich Low_complexity Low_complexity 2 68 0 1134 310 63 37 chr5 199359905 199360602 -3724930 + HAL1 LINE L1 7 721 -1786 1150 94 0 0 chr5 199360668 199360828 -3724704 + AluY SINE Alu 149 308 -3 568 154 17 103 chr5 199360833 199360950 -3724582 + FRAM SINE Alu 56 162 -14 272 281 0 24 chr5 199360961 199361043 -3724489 + HAL1 LINE L1 2319 2398 -109 2262 101 0 3 chr5 199361346 199361654 -3723878 - AluSg SINE Alu -3 307 1 566 315 63 13 chr5 199362515 199362753 -3722779 + MIR SINE MIR 3 252 -10 330 324 0 70 chr5 199365060 199365245 -3720287 + MER5B DNA MER1_type 1 172 -6 2407 62 0 10 chr5 199365545 199365854 -3719678 - AluY SINE Alu -5 306 1 2158 112 3 0 chr5 199365854 199366158 -3719374 - AluSx SINE Alu -7 305 1 2126 102 0 14 chr5 199366160 199366330 -3719202 - AluSx SINE Alu -9 303 137 2058 97 20 3 chr5 199366330 199366628 -3718904 - AluSq SINE Alu -10 303 1 2126 102 0 14 chr5 199366628 199366750 -3718782 - AluSx SINE Alu -175 137 15 345 167 90 0 chr5 199366885 199366963 -3718569 + L1ME3A LINE L1 6081 6165 -5 2030 106 3 0 chr5 199367085 199367367 -3718165 - AluSx SINE Alu -29 283 1 704 157 74 0 chr5 199368390 199368511 -3717021 - FAM SINE Alu -15 170 41 289 220 50 33 chr5 199368555 199368743 -3716789 - FRAM/FAM SINE Alu -80 86 29 248 191 0 10 chr5 199368884 199368940 -3716592 - Alu SINE Alu -93 209 170 415 230 0 0 chr5 199368940 199369014 -3716518 - AluJ/F(R)AM SINE Alu -103 209 136 1803 117 0 0 chr5 199369017 199369273 -3716259 - AluSx SINE Alu -16 296 41 2268 86 10 0 chr5 199369859 199370160 -3715372 - AluY SINE Alu -7 304 1 1243 171 0 18 chr5 199370175 199370397 -3715135 - AluJo SINE Alu -13 299 82 330 358 85 11 chr5 199370397 199370573 -3714959 - L1ME LINE L1 -378 5743 5555 496 258 74 58 chr5 199371082 199371195 -3714337 - MIR SINE MIR -60 202 83 2119 97 3 7 chr5 199371195 199371494 -3714038 + AluSq SINE Alu 1 298 -15 496 258 74 58 chr5 199371494 199371570 -3713962 - MIR SINE MIR -179 83 10 1353 74 0 6 chr5 199373935 199374110 -3711422 + AluSx SINE Alu 1 174 -138 899 120 0 21 chr5 199374164 199374306 -3711226 + AluSx SINE Alu 174 312 0 2250 103 0 10 chr5 199375201 199375511 -3710021 - AluSq SINE Alu -6 307 1 189 0 0 0 chr5 199376280 199376301 -3709231 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1722 157 27 23 chr5 199376361 199376661 -3708871 + AluJb SINE Alu 1 301 -11 1976 124 0 0 chr5 199376676 199376959 -3708573 + AluSx SINE Alu 25 307 -5 2111 114 3 3 chr5 199376996 199377304 -3708228 + AluSx SINE Alu 1 308 -4 2254 84 0 19 chr5 199378180 199378490 -3707042 - AluSg SINE Alu -6 304 1 2100 98 7 7 chr5 199378605 199378902 -3706630 - AluY SINE Alu -14 297 1 2061 135 3 0 chr5 199378948 199379259 -3706273 - AluSx SINE Alu 0 312 1 201 300 12 25 chr5 199379451 199379531 -3706001 - L2 LINE L2 -63 3250 3172 1501 110 0 9 chr5 199379812 199380030 -3705502 - AluJo SINE Alu -12 300 85 239 225 14 42 chr5 199380140 199380211 -3705321 - L2 LINE L2 -649 2665 2597 1907 139 0 23 chr5 199380560 199380870 -3704662 - AluJo SINE Alu 0 312 10 630 120 0 37 chr5 199381574 199381682 -3703850 + L1MB3 LINE L1 6080 6183 0 369 342 94 57 chr5 199381915 199382298 -3703234 + L1ME4a LINE L1 5553 5949 -172 823 143 0 27 chr5 199382806 199382953 -3702579 - FLAM_C SINE Alu 0 143 1 742 76 145 97 chr5 199383802 199383947 -3701585 - AluSg/x SINE Alu -4 306 155 593 195 86 23 chr5 199386233 199386361 -3699171 + AluJo SINE Alu 1 136 -176 2317 90 0 0 chr5 199387361 199387661 -3697871 + AluSx SINE Alu 1 300 -12 237 65 0 0 chr5 199390522 199390553 -3694979 + (CA)n Simple_repeat Simple_repeat 1 31 0 214 297 0 40 chr5 199391827 199391928 -3693604 + C-rich Low_complexity Low_complexity 6 102 0 201 214 36 24 chr5 199391988 199392072 -3693460 + (CCCG)n Simple_repeat Simple_repeat 3 87 0 228 253 11 23 chr5 199392088 199392203 -3693329 + (CCG)n Simple_repeat Simple_repeat 1 113 0 2137 75 0 38 chr5 199392512 199392831 -3692701 + AluSq SINE Alu 1 307 -6 1712 106 31 59 chr5 199392840 199393160 -3692372 + AluSx SINE Alu 1 311 -1 451 313 182 28 chr5 199393197 199393909 -3691623 - L2 LINE L2 -188 3084 2259 1894 133 10 10 chr5 199393999 199394292 -3691240 + AluSx SINE Alu 1 293 -19 3440 50 4 45 chr5 199394298 199394376 -3691156 + L1PA5 LINE L1 5708 5788 -366 1852 98 6 91 chr5 199394376 199394694 -3690838 + AluSc SINE Alu 1 291 -18 3440 50 4 45 chr5 199394694 199395080 -3690452 + L1PA5 LINE L1 5788 6153 -1 27 0 0 0 chr5 199395080 199395107 -3690425 + AT_rich Low_complexity Low_complexity 1 27 0 235 306 32 72 chr5 199395108 199395386 -3690146 - L1MC5 LINE L1 -191 7770 7504 676 278 5 19 chr5 199395472 199395677 -3689855 + MIR SINE MIR 30 231 -31 275 0 0 28 chr5 199395681 199395717 -3689815 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1737 106 0 0 chr5 199395777 199396013 -3689519 + AluSx SINE Alu 1 236 -76 451 235 5 43 chr5 199396118 199396305 -3689227 + CT-rich Low_complexity Low_complexity 1 180 0 2238 88 10 0 chr5 199396451 199396757 -3688775 - AluSc SINE Alu 0 309 1 2103 97 7 13 chr5 199396758 199397066 -3688466 - AluY SINE Alu -5 306 1 846 141 0 0 chr5 199397068 199397196 -3688336 - FLAM_C SINE Alu -4 139 12 2181 124 0 3 chr5 199397299 199397613 -3687919 - AluSq SINE Alu 0 313 1 427 295 0 0 chr5 199397845 199397950 -3687582 - L2 LINE L2 -5 3308 3204 2458 65 0 3 chr5 199397954 199398264 -3687268 - AluY SINE Alu 0 311 3 913 87 47 0 chr5 199398266 199398393 -3687139 - AluY SINE Alu -178 133 1 632 65 0 0 chr5 199398395 199398472 -3687060 - AluSq/x SINE Alu -180 133 57 280 266 31 0 chr5 199398720 199398784 -3686748 - L2 LINE L2 -2 3311 3246 2457 58 0 22 chr5 199399333 199399645 -3685887 - AluY SINE Alu -6 305 1 916 101 0 51 chr5 199399645 199399783 -3685749 - AluSq/x SINE Alu -176 137 7 2726 7 0 0 chr5 199399937 199400238 -3685294 - AluYa5 SINE Alu -10 301 1 199 345 0 0 chr5 199401864 199401922 -3683610 + MIR SINE MIR 87 144 -64 196 282 42 14 chr5 199401927 199401998 -3683534 + MIR SINE MIR 110 182 -80 1820 170 0 13 chr5 199402342 199402653 -3682879 + AluJo SINE Alu 1 307 -5 225 298 70 9 chr5 199402886 199403000 -3682532 - MER103 DNA DNA -45 121 1 2233 89 10 0 chr5 199403069 199403371 -3682161 - AluSp SINE Alu -8 305 1 2374 74 0 10 chr5 199405525 199405835 -3679697 - AluSx SINE Alu -5 307 1 2232 95 0 7 chr5 199406311 199406616 -3678916 - AluSg SINE Alu -7 303 1 761 182 64 182 chr5 199407881 199407963 -3677569 - MER63 DNA MER1_type -10 1052 962 2030 110 0 7 chr5 199407963 199408281 -3677251 - AluSg SINE Alu 0 316 1 761 182 64 182 chr5 199408281 199408312 -3677220 - MER63 DNA MER1_type -100 962 929 2028 111 10 3 chr5 199408312 199408621 -3676911 + AluSx SINE Alu 1 311 0 2216 98 0 0 chr5 199408630 199408925 -3676607 + AluSx SINE Alu 1 295 -17 761 182 64 182 chr5 199408925 199409009 -3676523 - MER63 DNA MER1_type -141 921 829 1814 163 13 7 chr5 199409009 199409316 -3676216 + AluJb SINE Alu 1 309 -3 761 182 64 182 chr5 199409316 199409383 -3676149 - MER63 DNA MER1_type -233 829 756 2065 87 52 0 chr5 199409383 199409669 -3675863 - AluSx SINE Alu -11 301 1 761 182 64 182 chr5 199409669 199409812 -3675720 - MER63 DNA MER1_type -306 756 680 847 201 13 0 chr5 199410014 199410173 -3675359 - FRAM SINE Alu -1 165 5 1293 129 9 36 chr5 199410179 199410403 -3675129 - AluJb SINE Alu -12 300 83 279 0 0 0 chr5 199410653 199410684 -3674848 + (CA)n Simple_repeat Simple_repeat 1 31 0 2021 90 0 4 chr5 199411265 199411531 -3674001 - AluSg SINE Alu -13 297 33 2093 133 0 0 chr5 199411531 199411829 -3673703 - AluSx SINE Alu -3 309 10 2250 94 0 7 chr5 199412255 199412554 -3672978 + AluSx SINE Alu 1 297 -15 2199 93 3 3 chr5 199413328 199413653 -3671879 - AluSc SINE Alu 0 325 1 541 335 21 21 chr5 199413768 199413962 -3671570 + MIR SINE MIR 56 249 -13 2341 75 0 25 chr5 199413992 199414311 -3671221 + AluY SINE Alu 1 311 0 288 85 0 21 chr5 199414529 199414576 -3670956 + Alu SINE Alu 2 47 -254 1903 142 7 16 chr5 199414698 199415008 -3670524 - AluSx SINE Alu -5 307 1 830 141 0 49 chr5 199415008 199415150 -3670382 - AluJo SINE Alu -177 135 1 2150 103 7 0 chr5 199415880 199416172 -3669360 + AluSg SINE Alu 1 294 -16 1951 121 46 0 chr5 199417592 199417874 -3667658 + AluSq SINE Alu 1 295 -18 1829 162 0 23 chr5 199417884 199418193 -3667339 + AluJo SINE Alu 1 302 -10 1333 170 174 8 chr5 199418795 199419054 -3666478 + AluJo SINE Alu 1 302 0 2158 98 0 7 chr5 199419096 199419391 -3666141 - AluSg1 SINE Alu -16 293 1 223 326 65 0 chr5 199421526 199421618 -3663914 + L2 LINE L2 3159 3256 -16 2114 114 0 20 chr5 199421624 199421930 -3663602 + AluSg SINE Alu 1 300 -10 2037 91 53 0 chr5 199423321 199423606 -3661926 - AluSq SINE Alu -13 300 1 2439 61 3 3 chr5 199424056 199424367 -3661165 - AluY SINE Alu 0 311 1 430 158 232 11 chr5 199424396 199424491 -3661041 + AluJb SINE Alu 2 117 -195 1509 132 0 19 chr5 199424526 199424791 -3660741 + AluSx SINE Alu 48 307 -5 1247 177 16 20 chr5 199424791 199424936 -3660596 - AluJo SINE Alu -35 277 132 1906 146 3 7 chr5 199424936 199425230 -3660302 - AluSx SINE Alu -19 293 1 1247 177 16 20 chr5 199425230 199425327 -3660205 - AluJo SINE Alu -180 132 36 271 216 27 0 chr5 199425449 199425523 -3660009 + L1M4 LINE L1 5127 5202 -944 2095 106 3 3 chr5 199425524 199425825 -3659707 + AluSg SINE Alu 1 301 -9 474 191 0 0 chr5 199425827 199425911 -3659621 + AluS SINE Alu 1 84 -228 253 197 92 0 chr5 199425911 199425987 -3659545 + L1M4 LINE L1 5192 5274 -872 249 102 0 0 chr5 199426022 199426071 -3659461 + L1M4 LINE L1 5263 5311 -835 960 149 0 18 chr5 199426073 199426241 -3659291 - AluSg/x SINE Alu -20 290 126 943 106 6 0 chr5 199426241 199426401 -3659131 + L1M4 LINE L1 5304 5464 -710 2073 97 10 3 chr5 199426420 199426708 -3658824 + AluSg SINE Alu 1 290 -20 2100 92 20 10 chr5 199426708 199427000 -3658532 + AluSg SINE Alu 1 295 -15 2304 93 3 0 chr5 199427003 199427313 -3658219 + AluSx SINE Alu 1 311 -1 180 0 0 0 chr5 199427605 199427625 -3657907 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 2144 102 10 10 chr5 199427626 199427920 -3657612 + AluSg SINE Alu 1 294 -16 2148 93 28 3 chr5 199428552 199428841 -3656691 + AluSc SINE Alu 1 296 -13 2042 131 0 3 chr5 199428903 199429200 -3656332 + AluSx SINE Alu 1 296 -16 2430 58 0 3 chr5 199429248 199429543 -3655989 + AluY SINE Alu 1 294 -17 672 132 7 132 chr5 199429584 199429736 -3655796 + FLAM_C SINE Alu 1 133 0 894 90 0 0 chr5 199433938 199434060 -3651472 + AluSq/x SINE Alu 1 122 -190 2274 81 0 10 chr5 199434060 199434369 -3651163 - AluSx SINE Alu -6 306 1 2245 96 0 7 chr5 199436411 199436714 -3648818 + AluSx SINE Alu 1 301 -11 2209 99 0 3 chr5 199437279 199437581 -3647951 - AluSx SINE Alu -11 301 1 250 289 133 0 chr5 199440351 199440434 -3645098 + MIR SINE MIR 99 192 -70 392 223 71 0 chr5 199440583 199440695 -3644837 - L1ME3 LINE L1 0 6162 6043 1773 171 3 3 chr5 199440695 199440987 -3644545 + AluJb SINE Alu 1 292 -20 2115 95 33 16 chr5 199441115 199441419 -3644113 + AluSx SINE Alu 1 309 -3 322 280 224 0 chr5 199441425 199441568 -3643964 - MIR SINE MIR -71 191 17 2327 87 0 13 chr5 199443655 199443964 -3641568 + AluSp SINE Alu 1 305 -8 231 329 66 0 chr5 199445043 199445119 -3640413 + MIR SINE MIR 112 192 -70 2257 102 0 3 chr5 199445175 199445480 -3640052 + AluSx SINE Alu 1 304 -8 1348 131 54 5 chr5 199446136 199446357 -3639175 + AluJo SINE Alu 63 294 -18 251 298 44 35 chr5 199446503 199446617 -3638915 - MIR SINE MIR -72 136 22 229 333 90 18 chr5 199446762 199446873 -3638659 - MIR SINE MIR -44 218 100 357 329 53 53 chr5 199447114 199447357 -3638175 + L2 LINE L2 2993 3235 -37 1372 119 0 15 chr5 199447771 199447972 -3637560 - AluSq SINE Alu -17 296 99 2400 44 3 3 chr5 199448020 199448315 -3637217 + AluY SINE Alu 1 295 -16 1790 158 24 3 chr5 199448315 199448607 -3636925 + AluJb SINE Alu 1 298 -14 881 155 19 19 chr5 199448607 199448768 -3636764 + AluJo/FRAM SINE Alu 135 295 -17 215 260 192 0 chr5 199448844 199448917 -3636615 + L2 LINE L2 3173 3259 -13 2245 79 0 0 chr5 199449132 199449433 -3636099 - AluY SINE Alu 0 301 1 2209 103 20 0 chr5 199449438 199449617 -3635915 - AluSg SINE Alu -2 308 119 261 0 0 0 chr5 199449617 199449646 -3635886 + (TG)n Simple_repeat Simple_repeat 2 30 0 2209 103 20 0 chr5 199449646 199449768 -3635764 - AluSg SINE Alu -191 119 1 556 291 34 17 chr5 199449977 199450152 -3635380 - MIR SINE MIR -74 188 11 2404 60 7 3 chr5 199450247 199450546 -3634986 + AluSg SINE Alu 1 300 -10 324 294 73 7 chr5 199450674 199450810 -3634722 - L2 LINE L2 -21 3292 3148 2364 61 3 3 chr5 199450842 199451138 -3634394 + AluY SINE Alu 1 296 -15 799 203 19 6 chr5 199451379 199451537 -3633995 + AluJo SINE Alu 121 280 -32 1766 126 70 0 chr5 199452003 199452274 -3633258 - AluSg SINE Alu -20 290 1 509 338 6 6 chr5 199452300 199452456 -3633076 - MIR SINE MIR -1 261 106 593 258 7 20 chr5 199452456 199452607 -3632925 + MIR SINE MIR 3 151 -111 1395 188 36 33 chr5 199452610 199452913 -3632619 + AluJo SINE Alu 3 306 -6 1665 113 60 15 chr5 199454037 199454302 -3631230 - AluJb SINE Alu -35 277 1 210 253 35 58 chr5 199455281 199455368 -3630164 - L3 LINE CR1 -939 638 554 219 346 19 58 chr5 199457380 199457484 -3628048 - MIR SINE MIR -60 148 84 214 272 0 22 chr5 199459685 199459777 -3625755 + (CGGGG)n Simple_repeat Simple_repeat 5 94 0 28 102 0 0 chr5 199459800 199459898 -3625634 + GC_rich Low_complexity Low_complexity 1 98 0 32 75 0 0 chr5 199459920 199459987 -3625545 + GC_rich Low_complexity Low_complexity 1 67 0 199 246 237 9 chr5 199460523 199460637 -3624895 - L2 LINE L2 -209 3063 2924 2014 103 0 4 chr5 199460978 199461295 -3624237 - AluY SINE Alu 0 316 1 428 123 55 0 chr5 199461454 199461527 -3624005 - AluS SINE Alu -9 300 224 346 299 327 5 chr5 199461784 199461998 -3623534 - L2 LINE L2 -22 3291 3009 976 187 0 0 chr5 199461999 199462165 -3623367 + FRAM SINE Alu 1 165 -11 1571 263 111 32 chr5 199462166 199462411 -3623121 - L2 LINE L2 -298 3015 2791 1939 149 7 3 chr5 199462411 199462713 -3622819 + AluSx SINE Alu 1 303 -9 1571 263 111 32 chr5 199462713 199463137 -3622395 - L2 LINE L2 -522 2791 2285 373 234 109 9 chr5 199463129 199463246 -3622286 - MIR3 SINE MIR -52 156 28 * 2376 64 0 3 chr5 199463740 199464036 -3621496 - AluSq SINE Alu -6 307 13 2205 103 3 0 chr5 199464044 199464345 -3621187 - AluSx SINE Alu -6 306 5 1989 73 77 0 chr5 199464920 199465192 -3620340 + AluSx SINE Alu 1 293 -19 970 181 10 10 chr5 199466855 199467048 -3618484 + AluJo SINE Alu 119 311 -1 2164 121 0 0 chr5 199467076 199467382 -3618150 + AluSx SINE Alu 1 306 -6 236 314 41 37 chr5 199467602 199467727 -3617805 - MIR SINE MIR -83 125 2 1989 117 21 7 chr5 199467744 199468034 -3617498 + AluSx SINE Alu 5 298 -14 250 167 21 0 chr5 199468044 199468092 -3617440 + MER57A LTR ERV1 295 343 -60 325 294 184 0 chr5 199468110 199468246 -3617286 - L1ME4a LINE L1 -2 6119 5959 330 324 52 7 chr5 199468408 199468544 -3616988 - L1ME4a LINE L1 -386 5735 5594 222 263 184 0 chr5 199468662 199468738 -3616794 + MIR SINE MIR 33 122 -86 1794 119 0 0 chr5 199468826 199469077 -3616455 - AluSg SINE Alu -59 251 1 2314 85 0 3 chr5 199469767 199470073 -3615459 - AluSx SINE Alu -7 305 1 2225 88 3 3 chr5 199470994 199471300 -3614232 - AluSx SINE Alu -6 306 1 240 294 191 0 chr5 199472673 199472781 -3612751 + MIR SINE MIR 56 187 -21 2126 83 28 0 chr5 199474183 199474471 -3611061 - AluSx SINE Alu -16 296 1 211 304 62 0 chr5 199474808 199474969 -3610563 + (CTACT)n Simple_repeat Simple_repeat 5 175 0 200 314 58 0 chr5 199474995 199475132 -3610400 + (CTACT)n Simple_repeat Simple_repeat 5 149 0 297 269 0 0 chr5 199475200 199475278 -3610254 + MER117 DNA MER1_type 3 80 -117 1785 129 3 60 chr5 199476883 199477008 -3608524 + AluJb SINE Alu 7 138 -174 2081 117 0 7 chr5 199477008 199477307 -3608225 + AluSx SINE Alu 1 297 -15 2147 92 11 0 chr5 199477307 199477591 -3607941 + AluSp SINE Alu 1 287 -26 1785 129 3 60 chr5 199477591 199477781 -3607751 + AluJb SINE Alu 136 305 -7 845 150 0 8 chr5 199477968 199478101 -3607431 + FLAM_C SINE Alu 1 132 -1 206 238 0 0 chr5 199478693 199478735 -3606797 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 2183 104 3 0 chr5 199478824 199479123 -3606409 + AluSx SINE Alu 1 300 -12 437 310 21 7 chr5 199479181 199479326 -3606206 - MIR3 SINE MIR -11 197 51 1998 104 11 7 chr5 199479820 199480107 -3605425 - AluSx SINE Alu -22 290 3 1195 263 63 48 chr5 199480127 199480648 -3604884 - MLT1K LTR MaLR -22 566 38 2159 81 46 0 chr5 199480654 199480939 -3604593 + AluSx SINE Alu 1 298 -14 195 69 0 0 chr5 199481400 199481429 -3604103 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 274 56 0 0 chr5 199481436 199481472 -3604060 - Alu SINE Alu -35 267 232 268 95 0 0 chr5 199481484 199481526 -3604006 - Alu SINE Alu -259 42 1 482 121 0 0 chr5 199481691 199481757 -3603775 + AluSq SINE Alu 30 95 -217 623 105 0 0 chr5 199481759 199481845 -3603687 + AluSp/q SINE Alu 182 267 -46 2240 89 13 0 chr5 199481845 199482147 -3603385 - AluSg SINE Alu -4 306 1 1034 255 105 28 chr5 199482147 199482575 -3602957 - L2 LINE L2 -7 3306 2846 1577 107 0 4 chr5 199482813 199483038 -3602494 - AluSq SINE Alu -8 305 82 2239 98 0 3 chr5 199483063 199483359 -3602173 + AluSp SINE Alu 1 295 -18 723 277 50 5 chr5 199483759 199483961 -3601571 + MIR SINE MIR 44 254 -8 2427 60 0 16 chr5 199484141 199484457 -3601075 + AluY SINE Alu 1 311 0 516 208 16 64 chr5 199484577 199484681 -3600851 + FLAM_A SINE Alu 6 105 -206 2279 73 3 7 chr5 199484681 199484982 -3600550 - AluY SINE Alu -11 300 1 516 208 16 64 chr5 199484982 199485002 -3600530 + FLAM_A SINE Alu 105 124 -187 918 174 0 12 chr5 199485008 199485169 -3600363 - FRAM SINE Alu -19 157 1 1941 99 51 4 chr5 199485184 199485457 -3600075 - AluSg SINE Alu -24 286 1 25 0 0 0 chr5 199485459 199485484 -3600048 + AT_rich Low_complexity Low_complexity 1 25 0 1194 52 0 13 chr5 199485485 199485638 -3599894 + AluSq SINE Alu 87 237 -76 1758 111 0 12 chr5 199485762 199486015 -3599517 - AluSq SINE Alu -63 250 1 735 245 74 0 chr5 199486056 199486219 -3599313 + FAM SINE Alu 1 175 0 1738 100 4 44 chr5 199486223 199486494 -3599038 + AluSq SINE Alu 44 303 -10 658 286 51 59 chr5 199486596 199486851 -3598681 + MIR SINE MIR 8 260 -2 2084 116 0 13 chr5 199486991 199487301 -3598231 + AluSq SINE Alu 1 306 -7 1478 199 20 17 chr5 199487309 199487606 -3597926 + AluJb SINE Alu 1 298 -14 2053 125 0 3 chr5 199488111 199488405 -3597127 + AluSq SINE Alu 1 293 -20 2006 110 9 52 chr5 199488405 199488731 -3596801 + AluSx SINE Alu 1 312 0 1791 122 90 0 chr5 199488747 199489025 -3596507 + AluSx SINE Alu 1 303 -9 2158 78 34 3 chr5 199489752 199490047 -3595485 - AluSx SINE Alu -8 304 1 349 317 79 65 chr5 199490136 199490384 -3595148 - L2 LINE L2 -45 3227 2973 2443 58 0 3 chr5 199490384 199490694 -3594838 - AluY SINE Alu -1 310 2 349 317 79 65 chr5 199490694 199490735 -3594797 - L2 LINE L2 -299 2973 2934 2129 104 0 0 chr5 199490959 199491246 -3594286 + AluSx SINE Alu 1 287 -25 2072 105 6 16 chr5 199491485 199491799 -3593733 - AluSq SINE Alu -2 311 1 2166 105 23 0 chr5 199492008 199492313 -3593219 + AluSx SINE Alu 1 312 0 2220 89 7 3 chr5 199492618 199492921 -3592611 - AluSx SINE Alu -8 304 1 2272 84 0 0 chr5 199493347 199493644 -3591888 + AluSx SINE Alu 1 297 -15 1880 139 56 0 chr5 199494107 199494394 -3591138 - AluSq SINE Alu -10 303 1 1670 150 0 44 chr5 199494476 199494619 -3590913 + AluJb SINE Alu 3 151 -182 2288 90 0 0 chr5 199494619 199494919 -3590613 + AluY SINE Alu 1 300 -11 1670 150 0 44 chr5 199494919 199495119 -3590413 + AluJb SINE Alu 151 333 0 2125 110 0 16 chr5 199495776 199496093 -3589439 - AluSx SINE Alu 0 312 1 284 118 47 106 chr5 199496146 199496231 -3589301 + AluSp/q SINE Alu 224 303 0 2452 32 0 0 chr5 199496245 199496528 -3589004 + AluY SINE Alu 1 283 -28 23 68 0 0 chr5 199496528 199496572 -3588960 + AT_rich Low_complexity Low_complexity 1 44 0 1363 98 0 0 chr5 199496573 199496757 -3588775 + AluSg/x SINE Alu 119 302 -8 249 250 0 48 chr5 199496763 199496867 -3588665 + Charlie7 DNA MER1_type 2514 2612 0 539 216 0 0 chr5 199496886 199496988 -3588544 - U13 snRNA snRNA -2 102 1 2310 88 0 3 chr5 199498079 199498384 -3587148 - AluSx SINE Alu -8 304 1 366 306 116 32 chr5 199498894 199499110 -3586422 + MIR SINE MIR 14 247 -15 389 262 139 0 chr5 199499266 199499388 -3586144 + L2 LINE L2 3133 3271 -1 1992 109 7 7 chr5 199499396 199499711 -3585821 + AluSx SINE Alu 1 315 0 2035 111 14 0 chr5 199499717 199500026 -3585506 + AluSx SINE Alu 1 313 0 2087 94 0 14 chr5 199500776 199501086 -3584446 + AluSx SINE Alu 1 306 0 267 296 28 19 chr5 199502413 199502521 -3583011 - MIR SINE MIR -141 121 13 2406 47 0 7 chr5 199502978 199503274 -3582258 + AluY SINE Alu 1 294 -17 2231 100 0 7 chr5 199503328 199503653 -3581879 + AluSx SINE Alu 1 312 0 1156 88 0 0 chr5 199503653 199503800 -3581732 + AluSq SINE Alu 134 280 -33 273 183 10 139 chr5 199504284 199504486 -3581046 + CT-rich Low_complexity Low_complexity 4 179 0 1323 153 0 5 chr5 199504851 199505066 -3580466 + AluJo SINE Alu 1 214 -98 297 102 0 20 chr5 199505066 199505115 -3580417 + AluJb SINE Alu 79 126 -176 1319 77 0 6 chr5 199505117 199505286 -3580246 + AluSq SINE Alu 1 168 -145 1829 136 3 30 chr5 199505307 199505608 -3579924 + AluJo SINE Alu 3 295 -17 183 114 0 0 chr5 199506705 199506740 -3578792 + (A)n Simple_repeat Simple_repeat 1 35 0 299 302 75 9 chr5 199508184 199508290 -3577242 + MIR SINE MIR 80 192 -70 22 0 0 0 chr5 199509667 199509689 -3575843 + GC_rich Low_complexity Low_complexity 1 22 0 657 193 15 7 chr5 199510701 199510836 -3574696 + FLAM_C SINE Alu 7 142 -1 1973 138 13 13 chr5 199511236 199511548 -3573984 - AluJo SINE Alu 0 312 1 481 342 71 12 chr5 199512008 199512248 -3573284 + L2 LINE L2 3014 3267 -5 1807 94 0 0 chr5 199512275 199512510 -3573022 + AluSq SINE Alu 1 235 -78 2031 125 0 7 chr5 199512622 199512931 -3572601 + AluSq SINE Alu 1 307 0 587 339 68 38 chr5 199512931 199513134 -3572398 + L1ME4a LINE L1 5686 5908 -213 2064 99 51 0 chr5 199513134 199513427 -3572105 + AluSg SINE Alu 1 308 -2 587 339 68 38 chr5 199513427 199513550 -3571982 + L1ME4a LINE L1 5908 6026 -95 2071 120 3 3 chr5 199513566 199513866 -3571666 + AluSx SINE Alu 1 300 -12 314 240 91 32 chr5 199514098 199514252 -3571280 - L1ME4a LINE L1 -7 6114 5952 2338 74 0 3 chr5 199514271 199514570 -3570962 + AluY SINE Alu 1 298 -13 646 297 60 78 chr5 199515935 199515951 -3569581 + L2 LINE L2 2821 2836 -436 913 133 0 15 chr5 199515951 199516086 -3569446 - FLAM_C SINE Alu 0 133 1 646 297 60 78 chr5 199516086 199516517 -3569015 + L2 LINE L2 2836 3260 -12 1974 100 71 0 chr5 199516517 199516798 -3568734 + AluSc SINE Alu 1 301 -8 181 246 16 33 chr5 199517305 199517366 -3568166 + L2 LINE L2 2721 2780 -534 276 75 0 0 chr5 199517446 199517486 -3568046 + MIR SINE MIR 102 141 -67 523 14 42 0 chr5 199517492 199517563 -3567969 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 189 0 0 0 chr5 199517627 199517648 -3567884 + (TC)n Simple_repeat Simple_repeat 2 22 0 2263 84 3 0 chr5 199517649 199517935 -3567597 - AluSq SINE Alu -25 288 2 216 98 24 0 chr5 199517943 199517984 -3567548 + L2 LINE L2 3019 3060 -212 2253 114 3 0 chr5 199519388 199519695 -3565837 + AluSx SINE Alu 1 308 -4 185 205 0 26 chr5 199520962 199521001 -3564531 + MIR SINE MIR 112 149 -113 1879 139 115 2 chr5 199521282 199521690 -3563842 + MER1A DNA MER1_type 1 539 0 2456 74 0 0 chr5 199521874 199522186 -3563346 - AluSx SINE Alu 0 312 1 32 26 0 0 chr5 199522312 199522351 -3563181 + AT_rich Low_complexity Low_complexity 1 39 0 3486 35 0 0 chr5 199522351 199522757 -3562775 - L1PA2 LINE L1 -3 6152 5747 2081 91 31 0 chr5 199522874 199523161 -3562371 - AluSx SINE Alu -11 301 6 335 238 28 42 chr5 199523457 199523600 -3561932 + (CCCCG)n Simple_repeat Simple_repeat 3 143 0 283 303 123 16 chr5 199526413 199526535 -3558997 - MIR SINE MIR -20 242 108 2306 86 0 7 chr5 199527418 199527719 -3557813 - AluSx SINE Alu -9 303 5 216 301 91 68 chr5 199528382 199528601 -3556931 + L2 LINE L2 3043 3266 -6 21 36 0 0 chr5 199529171 199529199 -3556333 + GC_rich Low_complexity Low_complexity 1 28 0 230 122 0 92 chr5 199529403 199529501 -3556031 + (CCCCG)n Simple_repeat Simple_repeat 5 93 0 24 0 0 0 chr5 199529632 199529656 -3555876 + GC_rich Low_complexity Low_complexity 1 24 0 24 61 0 0 chr5 199530971 199531004 -3554528 + AT_rich Low_complexity Low_complexity 1 33 0 450 283 30 24 chr5 199532235 199532401 -3553131 + MER5A DNA MER1_type 1 167 -22 1690 139 12 0 chr5 199532604 199532855 -3552677 - AluSx SINE Alu -27 285 32 1583 196 0 13 chr5 199532899 199533200 -3552332 - AluJb SINE Alu -15 297 1 367 148 247 0 chr5 199533200 199533281 -3552251 - AluJo/FRAM SINE Alu -49 253 153 1926 125 0 32 chr5 199533281 199533594 -3551938 - AluSx SINE Alu -9 303 1 1459 158 18 18 chr5 199534988 199535273 -3550259 - AluJo SINE Alu -13 299 15 2179 93 10 7 chr5 199535313 199535615 -3549917 - AluSx SINE Alu -9 303 1 2254 67 3 10 chr5 199535987 199536287 -3549245 - AluY SINE Alu -13 298 1 1968 113 7 13 chr5 199536287 199536587 -3548945 - AluSx SINE Alu -14 298 1 2394 58 0 10 chr5 199537740 199538048 -3547484 + AluY SINE Alu 1 305 -6 2130 77 0 32 chr5 199538059 199538372 -3547160 + AluY SINE Alu 1 303 -8 1988 134 3 10 chr5 199539407 199539721 -3545811 - AluSx SINE Alu 0 312 1 254 88 18 70 chr5 199542667 199542724 -3542808 + L1M4 LINE L1 5387 5440 -734 2107 135 0 0 chr5 199542724 199543027 -3542505 + AluSx SINE Alu 1 303 -9 773 100 21 3 chr5 199543038 199543279 -3542253 + AluSx SINE Alu 1 309 0 2000 236 100 67 chr5 199543279 199543866 -3541666 + L1MEc LINE L1 1735 2301 -3914 1870 139 13 10 chr5 199543866 199544175 -3541357 + AluSg SINE Alu 1 310 0 2000 236 100 67 chr5 199544175 199544486 -3541046 + L1MEc LINE L1 2301 2600 -3615 1658 139 0 8 chr5 199544486 199544745 -3540787 - AluJb SINE Alu -31 281 25 2000 236 100 67 chr5 199544745 199544962 -3540570 + L1MEc LINE L1 2600 2808 -3407 711 173 14 65 chr5 199544962 199545101 -3540431 + FLAM_C SINE Alu 2 133 0 2000 236 100 67 chr5 199545101 199545312 -3540220 + L1MEc LINE L1 2808 3011 -3204 2101 104 0 19 chr5 199545312 199545619 -3539913 + AluSg SINE Alu 1 301 -9 2000 236 100 67 chr5 199545619 199545697 -3539835 + L1MEc LINE L1 3011 3085 -3130 2142 103 3 3 chr5 199545697 199545998 -3539534 + AluY SINE Alu 1 301 -10 2215 96 0 16 chr5 199546002 199546314 -3539218 + AluSg SINE Alu 1 307 -3 2012 110 3 26 chr5 199546320 199546629 -3538903 + AluY SINE Alu 1 302 -9 2000 236 100 67 chr5 199546629 199546712 -3538820 + L1MEc LINE L1 3091 3170 -3045 1595 168 22 35 chr5 199546712 199547028 -3538504 + AluSx SINE Alu 1 312 0 2000 236 100 67 chr5 199547028 199547080 -3538452 + L1MEc LINE L1 3170 3295 -2920 2248 98 0 0 chr5 199547339 199547634 -3537898 + AluSg SINE Alu 1 295 -15 2257 93 7 3 chr5 199547985 199548287 -3537245 - AluSg SINE Alu -7 303 1 831 178 0 7 chr5 199548288 199548423 -3537109 - AluJo SINE Alu -178 134 1 687 214 52 12 chr5 199548469 199548642 -3536890 - MIR SINE MIR -71 191 12 2033 81 0 34 chr5 199548802 199549122 -3536410 - AluY SINE Alu -2 309 1 462 289 64 139 chr5 199549435 199549572 -3535960 + L2 LINE L2 1452 1598 -1716 1883 85 3 37 chr5 199549572 199549866 -3535666 - AluSx SINE Alu -17 295 12 462 289 64 139 chr5 199549866 199550962 -3534570 + L2 LINE L2 1598 2542 -772 2150 104 3 0 chr5 199550962 199551269 -3534263 - AluSx SINE Alu -4 308 1 462 289 64 139 chr5 199551269 199551621 -3533911 + L2 LINE L2 2542 2919 -395 907 120 91 86 chr5 199551768 199551920 -3533612 + MER46A DNA MER2_type 25 180 -2551 1378 168 63 36 chr5 199551920 199552055 -3533477 + AluJo SINE Alu 1 131 -181 2346 67 0 16 chr5 199552055 199552371 -3533161 + AluY SINE Alu 1 311 0 1378 168 63 36 chr5 199552371 199552538 -3532994 + AluJo SINE Alu 131 311 -1 907 120 91 86 chr5 199552538 199552594 -3532938 + MER46A DNA MER2_type 180 234 -2 1995 109 0 22 chr5 199552764 199553076 -3532456 - AluSx SINE Alu -7 305 1 2115 75 10 13 chr5 199554523 199554830 -3530702 - AluY SINE Alu -5 306 1 2062 84 0 18 chr5 199555297 199555582 -3529950 - AluSg SINE Alu -30 280 1 643 214 30 23 chr5 199557269 199557400 -3528132 + FLAM_A SINE Alu 1 132 -1 1945 134 0 10 chr5 199558561 199558866 -3526666 + AluSx SINE Alu 1 302 -10 1106 119 0 6 chr5 199558868 199559028 -3526504 + AluSq SINE Alu 137 295 -18 1208 188 44 53 chr5 199560711 199561030 -3524502 + L1MB8 LINE L1 5849 6164 -14 1584 160 27 34 chr5 199561673 199561967 -3523565 - AluJo SINE Alu -18 294 3 189 0 0 0 chr5 199562675 199562696 -3522836 + (CCA)n Simple_repeat Simple_repeat 2 22 0 278 302 73 0 chr5 199563235 199563331 -3522201 + L2 LINE L2 3122 3224 -48 2333 84 0 6 chr5 199563587 199563898 -3521634 - AluY SINE Alu -2 309 1 413 284 49 67 chr5 199564436 199564496 -3521036 + L2 LINE L2 3092 3152 -161 1985 89 0 20 chr5 199564496 199564800 -3520732 - AluSx SINE Alu -14 298 1 413 284 49 67 chr5 199564800 199564964 -3520568 + L2 LINE L2 3152 3312 -1 2094 80 3 13 chr5 199565950 199566250 -3519282 + AluSx SINE Alu 1 297 -15 836 200 0 12 chr5 199566542 199566712 -3518820 + FRAM SINE Alu 1 163 -13 2092 86 0 27 chr5 199566759 199567060 -3518472 + AluSq SINE Alu 2 294 -19 749 304 104 36 chr5 199567076 199567477 -3518055 - L1MC4a LINE L1 -312 5809 5539 2266 69 7 3 chr5 199567477 199567767 -3517765 + AluSq SINE Alu 1 291 -22 749 304 104 36 chr5 199567767 199568055 -3517477 - L1MC4a LINE L1 -582 5539 5272 2109 110 0 10 chr5 199568287 199568596 -3516936 + AluSx SINE Alu 1 306 -6 707 231 20 128 chr5 199568783 199568989 -3516543 + MER58A DNA MER1_type 1 177 -2243 2075 106 0 0 chr5 199568989 199569272 -3516260 + AluSx SINE Alu 13 295 -17 707 231 20 128 chr5 199569272 199569316 -3516216 + MER58A DNA MER1_type 177 224 0 223 185 62 0 chr5 199571399 199571480 -3514052 + (CCCA)n Simple_repeat Simple_repeat 1 86 0 1584 171 0 26 chr5 199572385 199572689 -3512843 + 7SLRNA srpRNA srpRNA 21 316 -4 1902 91 0 62 chr5 199572690 199573010 -3512522 + AluSx SINE Alu 1 300 -12 312 27 0 0 chr5 199573626 199573663 -3511869 + (TG)n Simple_repeat Simple_repeat 1 37 0 1271 129 9 36 chr5 199573915 199574139 -3511393 + AluJb SINE Alu 83 300 -12 817 200 12 6 chr5 199574145 199574305 -3511227 + FRAM SINE Alu 5 165 -1 636 193 88 152 chr5 199574509 199574652 -3510880 + MER63 DNA MER1_type 680 831 -231 1781 95 51 31 chr5 199574652 199574946 -3510586 + AluSx SINE Alu 1 300 -12 636 193 88 152 chr5 199574946 199575013 -3510519 + MER63 DNA MER1_type 831 868 -194 1778 163 13 7 chr5 199575013 199575320 -3510212 - AluJb SINE Alu -3 309 1 636 193 88 152 chr5 199575320 199575404 -3510128 + MER63 DNA MER1_type 868 956 -106 1437 71 0 0 chr5 199575404 199575587 -3509945 - AluSg/x SINE Alu -17 293 111 249 83 0 0 chr5 199575768 199575804 -3509728 + (CAT)n Simple_repeat Simple_repeat 1 36 0 450 205 5 166 chr5 199575847 199575908 -3509624 + L1MD3 LINE L1 7776 7845 -150 2070 105 7 7 chr5 199575908 199576204 -3509328 + AluSg SINE Alu 1 296 -14 450 205 5 166 chr5 199576204 199576272 -3509260 + L1MD3 LINE L1 7845 7922 -73 2410 59 0 3 chr5 199576272 199576575 -3508957 + AluY SINE Alu 1 302 -9 450 205 5 166 chr5 199576575 199576595 -3508937 + L1MD3 LINE L1 7922 7888 -107 1943 142 7 3 chr5 199576595 199576898 -3508634 + AluSx SINE Alu 1 304 -8 450 205 5 166 chr5 199576898 199576951 -3508581 + L1MD3 LINE L1 7887 7947 -48 1940 109 3 14 chr5 199576992 199577285 -3508247 + AluSq SINE Alu 13 302 -11 334 201 34 19 chr5 199577349 199577438 -3508094 - L1MB7 LINE L1 -65 6113 6029 293 0 27 0 chr5 199577441 199577478 -3508054 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 8251 34 7 236 chr5 199577478 199579246 -3506286 - SVA Other Other -23 1363 1 342 67 0 0 chr5 199579246 199579291 -3506241 + (GGGAGA)n Simple_repeat Simple_repeat 5 49 0 639 62 0 0 chr5 199779678 199779758 -3305774 + AluY SINE Alu 18 97 -214 1146 96 0 0 chr5 199779762 199779918 -3305614 + AluSg/x SINE Alu 143 298 -12 466 103 0 0 chr5 199779918 199779986 -3305546 + MSTA LTR MaLR 361 428 0 512 136 23 23 chr5 199780056 199780144 -3305388 + MER2 DNA MER2_type 3 90 -255 467 172 81 0 chr5 199780149 199780248 -3305284 - FRAM SINE Alu 0 176 70 702 124 16 0 chr5 199780248 199780369 -3305163 + MER2 DNA MER2_type 84 206 -139 1961 135 3 3 chr5 199780380 199780677 -3304855 - AluSx SINE Alu -15 297 1 2088 116 42 25 chr5 199780677 199781038 -3304494 - MSTA LTR MaLR -55 373 7 180 164 45 0 chr5 199782188 199782255 -3303277 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 962 77 27 31 chr5 199782297 199782563 -3302969 + (TGGA)n Simple_repeat Simple_repeat 1 265 0 761 78 34 45 chr5 199782578 199782757 -3302775 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 243 288 27 0 chr5 199782771 199782844 -3302688 - L2 LINE L2 -666 2648 2574 556 269 188 35 chr5 199782884 199783252 -3302280 - MLT1K LTR MaLR -3 585 162 1516 84 0 42 chr5 199783394 199783609 -3301923 + AluY SINE Alu 1 206 -105 842 199 39 0 chr5 199784585 199784741 -3300791 + AluSg/x SINE Alu 120 281 -31 441 165 0 134 chr5 199784741 199784787 -3300745 + L1MB2 LINE L1 5785 5836 -335 2534 55 0 0 chr5 199784787 199785095 -3300437 + AluY SINE Alu 1 308 -3 441 165 0 134 chr5 199785095 199785175 -3300357 + L1MB2 LINE L1 5836 5894 -277 447 215 12 117 chr5 199785354 199785517 -3300015 + L1MB2 LINE L1 6019 6164 -7 320 98 39 0 chr5 199785571 199785622 -3299910 + L1MB7 LINE L1 6131 6183 -1 293 333 109 30 chr5 199786377 199786770 -3298762 - L2 LINE L2 -63 3250 2827 440 221 77 0 chr5 199786794 199786898 -3298634 - MER81 DNA DNA -2 112 1 237 335 16 16 chr5 199788974 199789127 -3296405 + MIR SINE MIR 9 163 -45 3260 152 44 12 chr5 199790331 199790902 -3294630 - L1MB5 LINE L1 0 6174 5586 349 308 76 50 chr5 199792147 199792345 -3293187 + MIR SINE MIR 24 226 -36 446 245 68 25 chr5 199792683 199792846 -3292686 - MIR SINE MIR -69 193 24 317 269 93 9 chr5 199793921 199794029 -3291503 + MER103 DNA DNA 3 119 -47 218 189 0 0 chr5 199794991 199795028 -3290504 + MIR SINE MIR 111 147 -61 3411 160 49 2 chr5 199795340 199795915 -3289617 + LTR26 LTR ERV1 1 602 -1 224 307 71 57 chr5 199796954 199797094 -3288438 - MIR SINE MIR -113 149 8 984 205 37 0 chr5 199798337 199798552 -3286980 - AluJb SINE Alu -3 309 87 345 145 0 0 chr5 199798696 199798758 -3286774 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 274 288 70 27 chr5 199798983 199799137 -3286395 - MIR SINE MIR -63 145 10 804 228 245 20 chr5 199799422 199799878 -3285654 + MLT1K LTR MaLR 5 580 -8 192 259 233 10 chr5 199800151 199800344 -3285188 + L2 LINE L2 2813 3048 -224 269 342 31 54 chr5 199802661 199802879 -3282653 + MIR SINE MIR 4 212 -50 2067 120 0 13 chr5 199803618 199803919 -3281613 + AluSq SINE Alu 4 300 -13 182 188 0 0 chr5 199805369 199805401 -3280131 - MIR SINE MIR -216 46 15 809 315 136 24 chr5 199806213 199806750 -3278782 - L3 LINE CR1 -9 1568 972 230 277 21 21 chr5 199807231 199807325 -3278207 + (TGGA)n Simple_repeat Simple_repeat 4 97 0 197 282 243 0 chr5 199807334 199807437 -3278095 + MIR SINE MIR 56 183 -79 190 331 22 94 chr5 199808196 199808377 -3277155 - MIR3 SINE MIR -25 183 16 862 172 37 37 chr5 199808380 199808543 -3276989 - FRAM SINE Alu -13 163 1 2345 80 0 3 chr5 199810255 199810566 -3274966 - AluSx SINE Alu -2 310 1 259 191 7 19 chr5 199810573 199810643 -3274889 - AluJb SINE Alu -176 126 70 206 0 69 0 chr5 199810825 199810854 -3274678 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 2027 130 3 0 chr5 199810854 199811173 -3274359 + AluSq SINE Alu 1 320 0 810 74 0 28 chr5 199811185 199811293 -3274239 + AluSg SINE Alu 1 105 -205 217 306 143 10 chr5 199811961 199812059 -3273473 - MIR SINE MIR -62 146 36 234 0 0 0 chr5 199812119 199812145 -3273387 + (A)n Simple_repeat Simple_repeat 1 26 0 666 43 172 0 chr5 199812177 199812270 -3273262 + AluY SINE Alu 195 303 -8 423 176 14 0 chr5 199812270 199812344 -3273188 - MER4D LTR ERV1 -41 862 788 2592 117 32 62 chr5 199812552 199812652 -3272880 - MER4D LTR ERV1 -219 684 583 1565 197 14 7 chr5 199812652 199812947 -3272585 + AluJo SINE Alu 1 297 -15 2027 147 0 0 chr5 199812949 199813262 -3272270 + AluSq SINE Alu 1 313 0 2592 117 32 62 chr5 199813262 199813275 -3272257 - MER4D LTR ERV1 -321 582 570 1924 97 72 4 chr5 199813275 199813554 -3271978 + AluSg SINE Alu 1 298 -12 2592 117 32 62 chr5 199813554 199813932 -3271600 - MER4D LTR ERV1 -333 570 204 791 140 0 56 chr5 199813932 199814075 -3271457 + AluSq/x SINE Alu 1 135 -178 666 129 11 0 chr5 199814506 199814599 -3270933 - AluS SINE Alu -217 95 2 2807 227 40 5 chr5 199814631 199815459 -3270073 - L1M4 LINE L1 -2211 4433 3577 2262 90 0 10 chr5 199815459 199815794 -3269738 - AluSx SINE Alu 0 312 1 1981 80 33 43 chr5 199815806 199816106 -3269426 - AluSg1 SINE Alu -12 297 1 3922 196 50 15 chr5 199816106 199816293 -3269239 - L1M4 LINE L1 -4734 1912 1733 1792 117 52 31 chr5 199816293 199816462 -3269070 - AluSx SINE Alu -15 297 118 261 0 0 0 chr5 199816462 199816491 -3269041 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1792 117 52 31 chr5 199816491 199816612 -3268920 - AluSx SINE Alu -194 118 1 3922 196 50 15 chr5 199816612 199817541 -3267991 - L1M4 LINE L1 -4913 1733 764 225 241 96 24 chr5 199823687 199823770 -3261762 + MIR SINE MIR 21 109 -153 508 149 88 53 chr5 199825597 199825711 -3259821 + MLT1A1 LTR MaLR 248 365 0 461 270 135 12 chr5 199825717 199825969 -3259563 + L1ME3A LINE L1 3473 3755 -2391 727 272 57 84 chr5 199825993 199826328 -3259204 + L1ME3A LINE L1 4936 5279 -891 231 103 0 0 chr5 199826328 199826367 -3259165 + (CA)n Simple_repeat Simple_repeat 2 40 0 727 272 57 84 chr5 199826367 199826447 -3259085 + L1ME3A LINE L1 5279 5360 -810 2456 37 14 3 chr5 199826447 199826744 -3258788 - AluY SINE Alu -11 300 1 727 272 57 84 chr5 199826744 199826925 -3258607 + L1ME3A LINE L1 5360 5544 -626 791 167 0 167 chr5 199826925 199827285 -3258247 + AluY SINE Alu 1 300 -1 2016 103 17 3 chr5 199827294 199827585 -3257947 + AluSp SINE Alu 9 303 -10 727 272 57 84 chr5 199827585 199828089 -3257443 + L1ME3A LINE L1 5552 6027 -143 251 343 15 30 chr5 199829720 199829854 -3255678 + MIR3 SINE MIR 1 132 -76 232 351 88 31 chr5 199830231 199830604 -3254928 + L2 LINE L2 2293 2760 -554 2411 74 0 10 chr5 199831805 199832115 -3253417 + AluY SINE Alu 1 307 -4 2201 116 0 0 chr5 199832127 199832437 -3253095 + AluSx SINE Alu 3 312 0 1558 173 69 0 chr5 199833259 199833548 -3251984 + AluJo SINE Alu 1 309 -3 297 369 13 0 chr5 199833647 199833804 -3251728 - Charlie8 DNA MER1_type -2152 265 107 2047 111 18 0 chr5 199833814 199834094 -3251438 + AluSg SINE Alu 1 285 -25 419 300 0 0 chr5 199834099 199834189 -3251343 + L1MC4 LINE L1 6614 6703 -1339 441 226 0 59 chr5 199834198 199834300 -3251232 - L1MC4 LINE L1 -1339 6703 6608 873 188 0 62 chr5 199834360 199834536 -3250996 + FRAM SINE Alu 2 166 0 1856 88 75 21 chr5 199834603 199834934 -3250598 - THE1C LTR MaLR -1 374 26 2029 94 37 10 chr5 199834934 199835231 -3250301 + AluSx SINE Alu 1 305 -7 1284 200 46 98 chr5 199835433 199835874 -3249658 - MLT1C LTR MaLR -7 460 44 2376 58 10 0 chr5 199835874 199836168 -3249364 - AluY SINE Alu -14 297 1 1284 200 46 98 chr5 199836168 199836205 -3249327 - MLT1C LTR MaLR -423 44 7 277 291 190 19 chr5 199836234 199836392 -3249140 - L2 LINE L2 -339 2975 2791 207 283 33 33 chr5 199836708 199836800 -3248732 - L2 LINE L2 -521 2793 2702 2152 65 58 3 chr5 199837362 199837656 -3247876 - AluY SINE Alu -1 310 1 1668 165 0 7 chr5 199837760 199838068 -3247464 - AluSx SINE Alu 0 306 1 286 305 55 8 chr5 199838703 199838831 -3246701 - Charlie8 DNA MER1_type -2150 267 134 1730 94 0 4 chr5 199838953 199839188 -3246344 + AluSx SINE Alu 62 295 -17 1172 167 44 0 chr5 199839201 199839405 -3246127 + AluJb SINE Alu 90 302 -10 186 102 20 41 chr5 199840886 199840935 -3244597 + (CAATA)n Simple_repeat Simple_repeat 1 48 0 621 258 31 6 chr5 199841233 199841392 -3244140 - MIR SINE MIR -71 191 29 463 303 191 15 chr5 199841628 199842040 -3243492 - L2 LINE L2 -1 3271 2783 1638 180 13 10 chr5 199842048 199842348 -3243184 - AluJb SINE Alu -11 301 1 2132 115 7 0 chr5 199842760 199843064 -3242468 - AluSg SINE Alu -4 306 1 370 336 58 12 chr5 199844077 199844299 -3241233 - MIR SINE MIR -10 252 23 363 292 139 0 chr5 199845426 199845570 -3239962 + L2 LINE L2 3106 3269 -3 2364 85 0 0 chr5 199845705 199846010 -3239522 + AluSg SINE Alu 1 305 -5 297 344 23 0 chr5 199847427 199847558 -3237974 - L2 LINE L2 -558 2756 2623 432 338 32 6 chr5 199847606 199847772 -3237760 + MIR SINE MIR 42 210 -52 191 344 178 12 chr5 199848056 199848219 -3237313 + MIR SINE MIR 40 229 -33 460 178 168 0 chr5 199848448 199848555 -3236977 + MER5A DNA MER1_type 4 128 -61 503 319 56 46 chr5 199848755 199848971 -3236561 + MIR SINE MIR 20 237 -25 802 159 65 0 chr5 199850316 199850454 -3235078 + AluSq/x SINE Alu 1 147 -165 2102 102 0 3 chr5 199850456 199850739 -3234793 + AluSg SINE Alu 3 284 -26 506 256 80 20 chr5 199850890 199851089 -3234443 - L2 LINE L2 -1207 2107 1897 201 309 85 32 chr5 199851202 199851296 -3234236 + MIR SINE MIR 92 190 -72 312 281 284 29 chr5 199851405 199851715 -3233817 + L2 LINE L2 2564 2952 -362 2089 112 7 7 chr5 199851755 199852058 -3233474 - AluSx SINE Alu -9 303 1 223 338 103 7 chr5 199852083 199852219 -3233313 + L2 LINE L2 2962 3110 -162 196 335 121 22 chr5 199852339 199852521 -3233011 - MIR SINE MIR -61 201 2 1193 151 14 28 chr5 199853010 199853228 -3232304 - AluJo SINE Alu -13 299 85 937 223 38 17 chr5 199853340 199853578 -3231954 - MIR SINE MIR 0 262 20 232 27 54 0 chr5 199855052 199855089 -3230443 + (CGTG)n Simple_repeat Simple_repeat 3 41 0 35 0 0 0 chr5 199855105 199855140 -3230392 + GC_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr5 199855471 199855507 -3230025 + GC_rich Low_complexity Low_complexity 1 36 0 321 340 94 13 chr5 199855902 199856061 -3229471 - MIR3 SINE MIR -7 201 30 603 82 0 35 chr5 199856312 199856397 -3229135 - AluS SINE Alu -230 82 1 861 97 21 7 chr5 199856434 199856578 -3228954 - L1MB3 LINE L1 0 6183 6038 741 191 109 7 chr5 199856688 199856835 -3228697 - AluJb SINE Alu -14 298 137 225 65 0 0 chr5 199856872 199856903 -3228629 + (TG)n Simple_repeat Simple_repeat 1 31 0 185 138 0 0 chr5 199857288 199857317 -3228215 - MIR SINE MIR -187 75 47 371 303 79 22 chr5 199857324 199857504 -3228028 - MER20B DNA MER1_type -4 215 25 389 260 41 24 chr5 199858075 199858198 -3227334 + MIR SINE MIR 46 170 -92 2042 73 3 138 chr5 199858650 199859004 -3226528 - AluSp SINE Alu -7 306 1 634 257 152 6 chr5 199859291 199859625 -3225907 + MLT1G1 LTR MaLR 2 316 -214 265 246 41 49 chr5 199859614 199859670 -3225862 + MLT1G1 LTR MaLR 424 479 -70 * 1199 197 115 36 chr5 199859670 199859949 -3225583 - AluJb SINE Alu -1 301 1 265 246 41 49 chr5 199859949 199860014 -3225518 + MLT1G1 LTR MaLR 479 544 -5 248 294 37 46 chr5 199860016 199860125 -3225407 - MIR SINE MIR -71 137 30 224 328 129 9 chr5 199863729 199863845 -3221687 - MIR SINE MIR -22 240 111 1573 156 76 4 chr5 199864053 199864329 -3221203 + AluJo SINE Alu 1 296 -16 217 238 0 0 chr5 199865896 199865938 -3219594 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 2030 115 28 3 chr5 199866008 199866295 -3219237 + AluSx SINE Alu 1 294 -18 965 159 12 6 chr5 199866295 199866458 -3219074 + AluJo SINE Alu 1 164 -148 473 149 0 14 chr5 199867203 199867277 -3218255 + AluY SINE Alu 212 284 -27 459 289 40 0 chr5 199867926 199868078 -3217454 - MIR SINE MIR -91 171 14 203 0 37 0 chr5 199869646 199869673 -3215859 + (CA)n Simple_repeat Simple_repeat 2 29 0 279 79 0 0 chr5 199870020 199870058 -3215474 + (CA)n Simple_repeat Simple_repeat 1 38 0 330 306 66 25 chr5 199870356 199870477 -3215055 - MIR SINE MIR -64 144 19 418 184 31 202 chr5 199870600 199870760 -3214772 + L1M4 LINE L1 2644 2830 -3316 1693 102 16 0 chr5 199870760 199871005 -3214527 + AluSx SINE Alu 55 303 -9 418 184 31 202 chr5 199871005 199871029 -3214503 + L1M4 LINE L1 2830 2856 -3290 2133 122 0 0 chr5 199871029 199871325 -3214207 - AluSg SINE Alu -14 296 1 418 184 31 202 chr5 199871325 199871590 -3213942 + L1M4 LINE L1 2856 3017 -3129 1177 139 11 112 chr5 199871595 199871882 -3213650 - L1PA16 LINE L1 -21 6145 5888 2209 94 0 16 chr5 199871904 199872222 -3213310 - AluSq SINE Alu 0 313 1 746 202 12 68 chr5 199872224 199872414 -3213118 - MER58 DNA MER1_type -36 2384 2185 1814 116 51 18 chr5 199872414 199872727 -3212805 - AluSx SINE Alu 0 322 1 746 202 12 68 chr5 199872727 199872838 -3212694 - MER58 DNA MER1_type -235 2185 1 413 189 0 0 chr5 199872838 199872910 -3212622 + MER3 DNA MER1_type 40 111 -98 594 286 58 7 chr5 199872917 199873071 -3212461 + FRAM SINE Alu 7 168 -8 195 42 0 0 chr5 199873089 199873113 -3212419 + (GGA)n Simple_repeat Simple_repeat 2 25 0 381 113 47 28 chr5 199873122 199873228 -3212304 + GA-rich Low_complexity Low_complexity 2 109 0 486 127 123 158 chr5 199873252 199873442 -3212090 + MER33 DNA MER1_type 52 232 -2353 1747 193 92 41 chr5 199873442 199873877 -3211655 - MSTB2 LTR MaLR 0 457 1 486 127 123 158 chr5 199873877 199873946 -3211586 + MER33 DNA MER1_type 232 302 -22 478 121 0 0 chr5 199874271 199874337 -3211195 + AluJ/FLAM SINE Alu 1 66 -246 489 138 0 11 chr5 199874437 199874532 -3211000 - L1PA16 LINE L1 -291 5875 5785 206 319 43 21 chr5 199875073 199875167 -3210365 + L2 LINE L2 2717 2812 -502 2262 100 0 0 chr5 199875670 199875979 -3209553 - AluSg SINE Alu -1 309 1 2108 97 31 3 chr5 199876080 199876370 -3209162 + AluSx SINE Alu 1 298 -14 245 111 44 0 chr5 199876462 199876507 -3209025 + (CACGC)n Simple_repeat Simple_repeat 4 50 0 1725 199 7 0 chr5 199877625 199877927 -3207605 + AluJo SINE Alu 1 304 -8 359 247 52 0 chr5 199877939 199878036 -3207496 + Charlie8 DNA MER1_type 75 176 -2241 219 286 0 0 chr5 199878125 199878181 -3207351 + MIR3 SINE MIR 150 205 -3 180 341 11 34 chr5 199879290 199879378 -3206154 + MIR3 SINE MIR 88 173 -35 243 326 22 0 chr5 199879523 199879615 -3205917 - MIR SINE MIR -80 182 89 231 319 14 0 chr5 199879913 199879985 -3205547 - L3 LINE CR1 -89 1488 1416 215 297 51 115 chr5 199880329 199880625 -3204907 + L2 LINE L2 2995 3271 -1 2019 122 3 7 chr5 199882530 199882826 -3202706 + AluSx SINE Alu 17 311 -1 308 307 60 38 chr5 199883289 199883530 -3202002 + MIR3 SINE MIR 2 241 -21 2151 98 0 62 chr5 199883633 199883958 -3201574 - AluSx SINE Alu -7 305 1 500 292 69 19 chr5 199884020 199884335 -3201197 + L2 LINE L2 2801 3132 -181 746 244 95 96 chr5 199885065 199885575 -3199957 + L1ME4a LINE L1 5381 5933 -188 266 163 0 0 chr5 199885575 199885618 -3199914 - tRNA-Met-e tRNA tRNA -32 43 1 746 244 95 96 chr5 199885618 199885803 -3199729 + L1ME4a LINE L1 5933 6117 -4 201 109 0 43 chr5 199886155 199886201 -3199331 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 334 287 112 16 chr5 199888699 199888887 -3196645 - Charlie8 DNA MER1_type -2211 206 1 690 158 17 8 chr5 199891376 199891496 -3194036 + FAM SINE Alu 5 125 -60 1053 155 78 36 chr5 199891496 199891689 -3193843 + AluJo SINE Alu 85 285 -27 387 0 0 0 chr5 199891689 199891732 -3193800 + (TA)n Simple_repeat Simple_repeat 1 43 0 2264 72 7 0 chr5 199891867 199892160 -3193372 - AluY SINE Alu -8 303 9 1291 164 5 9 chr5 199892171 199892385 -3193147 - AluJo SINE Alu -15 297 85 1973 124 3 23 chr5 199892385 199892691 -3192841 - AluSx SINE Alu -9 303 4 416 209 101 16 chr5 199892781 199892910 -3192622 - MER5A DNA MER1_type 0 189 50 224 98 0 24 chr5 199892953 199892994 -3192538 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2751 166 69 44 chr5 199893701 199894038 -3191494 + L1MC1 LINE L1 5658 5985 -348 2206 107 3 3 chr5 199894038 199894338 -3191194 + AluSx SINE Alu 1 300 -12 2751 166 69 44 chr5 199894338 199894655 -3190877 + L1MC1 LINE L1 5985 6328 -5 2037 131 10 10 chr5 199894656 199894968 -3190564 + AluSx SINE Alu 1 312 0 221 289 9 79 chr5 199894991 199895105 -3190427 - MIR SINE MIR -61 201 96 294 328 111 6 chr5 199895832 199896003 -3189529 - MIR SINE MIR -11 251 63 250 284 21 43 chr5 199896276 199896417 -3189115 + (TTAGGG)n Simple_repeat Simple_repeat 1 138 0 416 320 17 6 chr5 199896503 199896678 -3188854 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 1628 188 40 122 chr5 199897292 199897872 -3187660 + L1MD1 LINE L1 5696 6227 -15 1736 74 126 19 chr5 199898190 199898329 -3187203 - AluSg1 SINE Alu -11 298 175 195 42 0 0 chr5 199898329 199898353 -3187179 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1736 74 126 19 chr5 199898353 199898482 -3187050 - AluSg1 SINE Alu -134 175 1 289 333 108 0 chr5 199898486 199898606 -3186926 - MIR SINE MIR -65 197 65 2188 90 7 10 chr5 199899577 199899877 -3185655 - AluSx SINE Alu -13 299 1 243 146 0 0 chr5 199899894 199899935 -3185597 + (TG)n Simple_repeat Simple_repeat 2 42 0 579 287 37 6 chr5 199900367 199900531 -3185001 - MIR SINE MIR -74 188 20 538 281 82 6 chr5 199900931 199901102 -3184430 - MIR SINE MIR -35 227 44 373 241 160 0 chr5 199901131 199901269 -3184263 + MLT1G LTR MaLR 430 567 0 411 312 115 6 chr5 199901403 199901560 -3183972 - MIR SINE MIR -65 197 24 399 304 89 16 chr5 199902071 199902255 -3183277 - MIR SINE MIR -63 145 2 279 0 0 0 chr5 199902821 199902852 -3182680 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 531 179 0 0 chr5 199904557 199904697 -3180835 + (TG)n Simple_repeat Simple_repeat 2 141 0 243 208 38 0 chr5 199906485 199906538 -3178994 + G-rich Low_complexity Low_complexity 6 60 0 237 343 71 0 chr5 199907012 199907111 -3178421 - MIR SINE MIR -80 182 77 194 300 14 29 chr5 199907794 199907864 -3177668 + MIR SINE MIR 79 147 -115 225 0 0 0 chr5 199908041 199908066 -3177466 + (TG)n Simple_repeat Simple_repeat 2 26 0 664 252 32 7 chr5 199908091 199908246 -3177286 - FRAM SINE Alu -11 165 7 2440 70 0 0 chr5 199908252 199908554 -3176978 - AluSx SINE Alu -10 302 1 194 253 21 84 chr5 199909333 199909428 -3176104 - MIR SINE MIR -71 191 103 1658 228 30 24 chr5 199909441 199909907 -3175625 + L1MB3 LINE L1 5715 6183 0 340 299 56 9 chr5 199910035 199910142 -3175390 - MIR SINE MIR -141 121 10 670 287 90 9 chr5 199911183 199911406 -3174126 - MIR SINE MIR -9 253 13 265 288 116 7 chr5 199911878 199912024 -3173508 - MIR SINE MIR -37 225 64 198 0 0 0 chr5 199912284 199912306 -3173226 + (T)n Simple_repeat Simple_repeat 1 22 0 226 324 99 9 chr5 199913480 199913591 -3171941 + MIR SINE MIR 132 252 -10 287 378 14 14 chr5 199913871 199914019 -3171513 - MER5A DNA MER1_type -3 186 39 1977 133 84 35 chr5 199914231 199914577 -3170955 - THE1B LTR MaLR -1 363 1 1627 108 4 9 chr5 199915165 199915396 -3170136 + AluSq SINE Alu 16 245 -68 521 323 108 20 chr5 199915707 199916113 -3169419 + L2 LINE L2 2830 3271 -42 342 286 68 83 chr5 199916803 199917139 -3168393 + HAL1 LINE L1 1331 1661 -846 2241 87 0 7 chr5 199917665 199917963 -3167569 - AluSc SINE Alu -13 296 1 1630 183 53 41 chr5 199918125 199918356 -3167176 + MER2 DNA MER2_type 3 241 -103 2198 96 0 20 chr5 199918356 199918658 -3166874 + AluSx SINE Alu 1 296 -16 1630 183 53 41 chr5 199918658 199918764 -3166768 + MER2 DNA MER2_type 241 344 0 2323 67 0 30 chr5 199919565 199919865 -3165667 - AluY SINE Alu -18 293 3 2080 121 0 7 chr5 199920244 199920580 -3164952 - AluSx SINE Alu 0 334 1 402 207 81 0 chr5 199921246 199921333 -3164199 + MER3 DNA MER1_type 82 128 -81 1058 182 106 46 chr5 199921333 199921635 -3163897 + L1MB7 LINE L1 5849 6168 -16 2406 75 3 0 chr5 199921647 199921955 -3163577 + AluSc SINE Alu 1 309 0 263 160 20 0 chr5 199921968 199922018 -3163514 + MER3 DNA MER1_type 159 209 0 225 200 20 0 chr5 199921976 199922026 -3163506 - MER3 DNA MER1_type -119 90 40 * 211 347 141 22 chr5 199924096 199924373 -3161159 + L2 LINE L2 2932 3241 -31 1654 219 72 0 chr5 199925726 199926086 -3159446 + MLT1B LTR MaLR 1 386 -4 853 274 16 18 chr5 199926930 199927239 -3158293 + L1MC4a LINE L1 5522 5830 -297 1581 187 22 28 chr5 199977359 199977718 -3107814 + MLT1C LTR MaLR 65 421 -46 343 287 67 44 chr5 199977778 199977915 -3107617 + L2 LINE L2 3174 3313 0 545 188 0 0 chr5 199978880 199978976 -3106556 + MER2 DNA MER2_type 1 96 -249 1584 148 7 64 chr5 199978976 199979259 -3106273 + AluJb SINE Alu 24 290 -22 1895 151 17 0 chr5 199987384 199987682 -3097850 - AluSq SINE Alu -10 303 1 2104 105 9 29 chr5 199987799 199988114 -3097418 + AluSp SINE Alu 2 310 -3 1434 174 9 85 chr5 199998064 199998218 -3087314 + AluJo SINE Alu 5 169 -143 315 0 0 0 chr5 199998218 199998253 -3087279 + (TG)n Simple_repeat Simple_repeat 1 35 0 1814 133 57 0 chr5 199998253 199998532 -3087000 + AluSx SINE Alu 2 296 -16 1434 174 9 85 chr5 199998532 199998693 -3086839 + AluJo SINE Alu 167 297 -15 261 281 172 69 chr5 199998714 199998917 -3086615 - MLT1K LTR MaLR -71 517 294 270 328 33 8 chr5 199999085 199999207 -3086325 - MLT1K LTR MaLR -461 127 3 1008 142 0 0 chr5 200000326 200000481 -3085051 - FRAM SINE Alu 0 176 22 2401 93 0 0 chr5 200000967 200001279 -3084253 - AluSx SINE Alu 0 312 1 1573 173 42 3 chr5 200001542 200001826 -3083706 - AluJo SINE Alu -17 295 1 2288 110 0 0 chr5 200002209 200002517 -3083015 - AluSx SINE Alu -4 308 1 2115 121 0 0 chr5 200002811 200003109 -3082423 + AluSg SINE Alu 1 298 -12 621 315 70 0 chr5 200003126 200003326 -3082206 + MIR SINE MIR 47 260 -2 303 270 0 30 chr5 200004219 200004319 -3081213 + (TG)n Simple_repeat Simple_repeat 1 97 0 455 271 0 6 chr5 200004332 200004513 -3081019 + (TG)n Simple_repeat Simple_repeat 1 180 0 333 306 60 8 chr5 200004688 200004841 -3080691 + MIR SINE MIR 28 153 -55 487 262 49 6 chr5 200005106 200005294 -3080238 + MLT1B LTR MaLR 1 175 -215 1918 80 18 7 chr5 200006041 200006316 -3079216 + AluSg SINE Alu 11 288 -22 241 360 76 55 chr5 200006904 200007140 -3078392 + MIR SINE MIR 20 260 -2 351 313 92 23 chr5 200007556 200007773 -3077759 + L3 LINE CR1 1335 1566 -11 1663 193 55 40 chr5 200008157 200008407 -3077125 - L1ME2 LINE L1 -2 6162 5900 2192 116 0 0 chr5 200008407 200008708 -3076824 + AluSx SINE Alu 3 303 -9 1663 193 55 40 chr5 200008708 200008928 -3076604 - L1ME2 LINE L1 -264 5900 5685 1872 233 37 64 chr5 200009339 200010012 -3075520 - L1ME1 LINE L1 -2 6233 5579 2899 255 82 61 chr5 200010016 200010477 -3075055 - L1ME1 LINE L1 -4915 1481 1031 2426 63 3 0 chr5 200010477 200010776 -3074756 - AluY SINE Alu -11 300 1 2899 255 82 61 chr5 200010776 200011168 -3074364 - L1ME1 LINE L1 -5365 1031 649 185 0 40 0 chr5 200011168 200011193 -3074339 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2899 255 82 61 chr5 200011193 200011213 -3074319 - L1ME1 LINE L1 -5747 649 631 2074 87 0 0 chr5 200011213 200011479 -3074053 - AluSx SINE Alu -41 271 6 2899 255 82 61 chr5 200011479 200012018 -3073514 - L1ME1 LINE L1 -5765 631 37 354 238 125 94 chr5 200012030 200012153 -3073379 - L1MD3 LINE L1 -12 7983 7865 2010 142 13 7 chr5 200012153 200012463 -3073069 + AluJb SINE Alu 1 312 0 354 238 125 94 chr5 200012463 200012482 -3073050 - L1MD3 LINE L1 -130 7865 7848 1570 217 175 40 chr5 200012482 200013030 -3072502 + MLT1E3 LTR MaLR 3 624 0 354 238 125 94 chr5 200013030 200013046 -3072486 - L1MD3 LINE L1 -147 7848 7819 3798 170 79 18 chr5 200013230 200014132 -3071400 + L1MB5 LINE L1 5218 6174 0 1409 202 71 6 chr5 200014210 200014562 -3070970 - L1MD3 LINE L1 -170 7825 7451 297 234 21 21 chr5 200014571 200014665 -3070867 - MLT1F1 LTR MaLR -438 129 36 3307 246 36 47 chr5 200014666 200014857 -3070675 - L1MC3 LINE L1 -688 7097 6906 1589 142 49 0 chr5 200014857 200015103 -3070429 - AluSx SINE Alu -54 258 1 3307 246 36 47 chr5 200015103 200015719 -3069813 - L1MC3 LINE L1 -879 6906 6303 2408 90 0 0 chr5 200015719 200016029 -3069503 - AluSx SINE Alu -2 310 1 3307 246 36 47 chr5 200016029 200016376 -3069156 - L1MC3 LINE L1 -1482 6303 5954 2023 111 3 46 chr5 200016408 200016732 -3068800 - AluSq SINE Alu -3 310 1 416 269 76 8 chr5 200016841 200016960 -3068572 + MIR SINE MIR 109 235 -27 309 339 88 77 chr5 200017286 200017743 -3067789 - L1ME4a LINE L1 -120 6001 5540 2008 135 7 3 chr5 200018730 200019034 -3066498 + AluJb SINE Alu 1 305 -7 2155 116 15 112 chr5 200019506 200019979 -3065553 + LTR12 LTR ERV1 1 427 -287 2135 73 30 7 chr5 200019979 200020282 -3065250 - AluY SINE Alu -1 310 1 1167 118 0 0 chr5 200020292 200020461 -3065071 - AluSg/x SINE Alu -2 310 142 207 300 55 10 chr5 200020481 200020614 -3064918 + MIR SINE MIR 18 157 -62 2186 95 7 3 chr5 200023473 200023768 -3061764 + AluSx SINE Alu 1 296 -16 271 286 0 0 chr5 200023907 200023977 -3061555 - MER112 DNA MER1_type -8 252 183 987 210 97 32 chr5 200025154 200025525 -3060007 + MLT1C LTR MaLR 1 395 -72 2170 119 3 0 chr5 200025581 200025891 -3059641 - AluSq SINE Alu -2 311 1 375 41 0 0 chr5 200025892 200025941 -3059591 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2293 75 0 0 chr5 200025941 200026222 -3059310 - AluSq SINE Alu -32 281 1 450 237 159 73 chr5 200026969 200027214 -3058318 - MLT1K LTR MaLR -57 531 266 1257 166 178 33 chr5 200027231 200027568 -3057964 + MLT1B LTR MaLR 1 386 -4 428 219 171 0 chr5 200027572 200027718 -3057814 + L1MB4 LINE L1 6004 6174 -6 487 284 53 76 chr5 200027730 200027994 -3057538 - MLT1K LTR MaLR -328 260 3 2344 122 0 0 chr5 200028084 200028396 -3057136 + AluSx SINE Alu 1 312 0 508 251 77 33 chr5 200028449 200028632 -3056900 + MIR SINE MIR 39 229 -33 1435 162 34 97 chr5 200029376 200029557 -3055975 - AluJo SINE Alu -11 301 147 2312 82 14 0 chr5 200029557 200029839 -3055693 + AluSc SINE Alu 1 286 -23 1435 162 34 97 chr5 200029839 200029978 -3055554 - AluJo SINE Alu -165 147 1 210 71 0 0 chr5 200030244 200030272 -3055260 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 202 302 42 31 chr5 200030813 200030909 -3054623 + L2 LINE L2 3210 3306 -7 194 127 56 0 chr5 200031363 200031434 -3054098 + (TA)n Simple_repeat Simple_repeat 2 76 0 892 199 43 14 chr5 200032064 200032275 -3053257 + MER20 DNA MER1_type 3 219 0 27 0 0 0 chr5 200032569 200032596 -3052936 + AT_rich Low_complexity Low_complexity 1 27 0 2297 122 3 0 chr5 200032721 200033032 -3052500 - AluSq SINE Alu -1 312 1 22 0 0 0 chr5 200033148 200033170 -3052362 + AT_rich Low_complexity Low_complexity 1 22 0 2407 65 7 7 chr5 200033274 200033566 -3051966 + AluSx SINE Alu 3 294 -18 312 240 41 83 chr5 200033630 200033751 -3051781 - L1ME LINE L1 -356 5806 5691 * 322 333 53 18 chr5 200033749 200033920 -3051612 + L1 LINE L1 5155 5331 -815 648 116 0 0 chr5 200033922 200034017 -3051515 + AluSc SINE Alu 206 300 -9 220 308 85 54 chr5 200034057 200034281 -3051251 - L2 LINE L2 -799 2515 2285 325 91 0 0 chr5 200034447 200034491 -3051041 - MLT2D LTR ERVL -4 410 367 424 200 11 0 chr5 200034507 200034682 -3050850 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 172 0 0 chr5 200035344 200035443 -3050089 + (TG)n Simple_repeat Simple_repeat 1 99 0 442 155 0 0 chr5 200035451 200035522 -3050010 - MLT2C1 LTR ERVL -41 356 286 378 287 110 12 chr5 200036910 200037074 -3048458 + MIR SINE MIR 77 256 -6 1629 143 21 90 chr5 200037789 200038124 -3047408 - AluJo SINE Alu 0 312 1 1456 156 109 47 chr5 200038789 200039129 -3046403 + MLT1A1 LTR MaLR 1 361 -4 312 211 0 0 chr5 200039130 200039187 -3046345 + MLT1A1 LTR MaLR 309 365 0 2282 104 3 0 chr5 200039496 200039795 -3045737 + AluSq SINE Alu 1 300 -13 1247 222 229 47 chr5 200040534 200040572 -3044960 - L1ME3A LINE L1 0 6170 6140 1808 92 75 98 chr5 200040572 200040878 -3044654 + AluSq SINE Alu 1 299 -14 1247 222 229 47 chr5 200040878 200041324 -3044208 - L1ME3A LINE L1 -30 6140 5550 2032 106 48 0 chr5 200041324 200041597 -3043935 - AluSx SINE Alu -26 286 1 1247 222 229 47 chr5 200041597 200041723 -3043809 - L1ME3A LINE L1 -620 5550 5448 1217 251 78 82 chr5 200041718 200041953 -3043579 - L1ME3A LINE L1 -1308 4838 4604 * 1791 177 0 19 chr5 200041953 200042263 -3043269 - AluJb SINE Alu -8 304 1 1217 251 78 82 chr5 200042263 200042809 -3042723 - L1ME3A LINE L1 -1542 4604 4060 1232 233 57 14 chr5 200042834 200043254 -3042278 - L1ME3A LINE L1 -2199 3947 3510 2466 97 3 0 chr5 200043324 200043633 -3041899 - AluSx SINE Alu -2 310 1 2559 203 13 2 chr5 200043645 200044201 -3041331 - L1MB7 LINE L1 -8 6176 5615 287 232 125 0 chr5 200044201 200044313 -3041219 - L1MC/D LINE L1 -1983 5825 5700 980 239 60 38 chr5 200044316 200044630 -3040902 + MER5C DNA MER1_type 3 323 -1 1162 194 253 3 chr5 200044786 200045126 -3040406 + L1MB3 LINE L1 5755 6179 -4 2374 95 3 9 chr5 200047623 200047938 -3037594 + AluSq SINE Alu 1 313 0 2334 93 20 0 chr5 200048097 200048398 -3037134 - AluSg SINE Alu -3 307 1 1317 249 46 3 chr5 200048470 200048816 -3036716 + MLT1A1 LTR MaLR 5 365 0 1789 157 82 6 chr5 200049063 200049100 -3036432 + L1MB3 LINE L1 5792 5825 -358 2379 92 0 3 chr5 200049100 200049393 -3036139 + AluSg SINE Alu 1 292 -18 1789 157 82 6 chr5 200049393 200049719 -3035813 + L1MB3 LINE L1 5825 6183 0 247 266 96 0 chr5 200049779 200049873 -3035659 - MIR SINE MIR -70 192 90 943 259 22 37 chr5 200049933 200050257 -3035275 - MLT1A2 LTR MaLR -48 326 8 377 264 9 18 chr5 200050264 200050374 -3035158 + MIR SINE MIR 70 178 -84 338 293 94 31 chr5 200051261 200051452 -3034080 - MLT1J LTR MaLR -2 509 307 420 234 131 14 chr5 200051520 200051665 -3033867 + MIR3 SINE MIR 22 183 -25 930 279 81 55 chr5 200051665 200051731 -3033801 - MLT1G1 LTR MaLR 0 595 532 2092 121 7 3 chr5 200051731 200052020 -3033512 + AluSp SINE Alu 1 290 -23 930 279 81 55 chr5 200052020 200052428 -3033104 - MLT1G1 LTR MaLR -63 532 61 1788 176 7 3 chr5 200052428 200052718 -3032814 - AluJb SINE Alu -21 291 1 930 279 81 55 chr5 200052718 200052777 -3032755 - MLT1G1 LTR MaLR -534 61 5 361 153 21 181 chr5 200053273 200053417 -3032115 - MLT1K LTR MaLR -14 574 454 242 253 0 84 chr5 200053655 200053750 -3031782 + MLT1H LTR MaLR 225 311 -284 314 276 89 0 chr5 200053820 200053958 -3031574 + MLT1H LTR MaLR 397 549 0 532 293 128 66 chr5 200053961 200054077 -3031455 - MLT1K LTR MaLR -221 367 260 2219 93 14 0 chr5 200054077 200054366 -3031166 - AluSp SINE Alu -20 293 1 532 293 128 66 chr5 200054366 200054584 -3030948 - MLT1K LTR MaLR -328 260 12 342 183 0 42 chr5 200056275 200056346 -3029186 - MLT1K LTR MaLR -12 576 509 258 208 0 0 chr5 200056403 200056456 -3029076 - MLT1K LTR MaLR -173 415 363 310 362 125 4 chr5 200056487 200056719 -3028813 - MLT1K LTR MaLR -319 269 10 305 242 12 55 chr5 200057826 200057934 -3027598 + MIR SINE MIR 48 148 -64 270 56 0 0 chr5 200058045 200058081 -3027451 + (TGAG)n Simple_repeat Simple_repeat 4 39 0 1085 296 52 5 chr5 200058360 200058844 -3026688 + MLT1K LTR MaLR 12 588 0 2210 122 30 0 chr5 200059440 200059618 -3025914 - AluSq SINE Alu 0 313 142 582 51 0 0 chr5 200059618 200059696 -3025836 + (TC)n Simple_repeat Simple_repeat 2 79 0 * 675 67 0 0 chr5 200059695 200059784 -3025748 + (TA)n Simple_repeat Simple_repeat 1 89 0 2210 122 30 0 chr5 200059696 200059909 -3025623 - AluSq SINE Alu -171 142 1 1783 201 16 7 chr5 200060891 200061325 -3024207 - L1MB4 LINE L1 0 6180 5743 2553 60 0 0 chr5 200061356 200061655 -3023877 - AluY SINE Alu -12 299 1 1790 170 45 9 chr5 200061689 200062024 -3023508 + MER7A DNA MER2_type 2 346 0 294 331 38 23 chr5 200062098 200062231 -3023301 - MIR SINE MIR -6 256 122 1075 198 14 5 chr5 200062332 200062544 -3022988 + Tigger3(Golem) DNA MER2_type 2816 3029 0 481 303 35 36 chr5 200062618 200062874 -3022658 - MIR SINE MIR -6 256 3 565 205 21 5 chr5 200063241 200063673 -3021859 + (TCCA)n Simple_repeat Simple_repeat 1 439 0 194 323 15 0 chr5 200063691 200063756 -3021776 - L2 LINE L2 -16 3256 3191 394 245 0 10 chr5 200063850 200063948 -3021584 + Charlie8 DNA MER1_type 93 189 -2228 191 139 0 28 chr5 200064197 200064233 -3021299 + MIR SINE MIR 111 145 -117 21 36 0 0 chr5 200064571 200064599 -3020933 + GC_rich Low_complexity Low_complexity 1 28 0 239 139 0 0 chr5 200064653 200064689 -3020843 - Alu SINE Alu -242 59 24 6768 59 25 12 chr5 200064689 200065517 -3020015 + SVA Other Other 548 1386 0 2465 86 0 0 chr5 200065544 200065847 -3019685 + AluSg SINE Alu 1 303 -7 380 222 33 22 chr5 200066142 200066232 -3019300 - L2 LINE L2 0 3313 3223 278 299 136 11 chr5 200066636 200066813 -3018719 - L2 LINE L2 -177 3095 2897 3131 169 12 23 chr5 200068887 200069531 -3016001 + L1MB3 LINE L1 5547 6183 0 459 260 75 0 chr5 200069585 200069731 -3015801 + MLT1E2 LTR MaLR 247 403 -223 * 1006 207 126 0 chr5 200069728 200069974 -3015558 + MLT1E2 LTR MaLR 308 584 -42 727 249 34 10 chr5 200069984 200070193 -3015339 + MIR SINE MIR 48 261 -1 296 210 16 0 chr5 200070442 200070504 -3015028 + MIR SINE MIR 48 110 -152 757 302 43 27 chr5 200071129 200071530 -3014002 - L1ME4a LINE L1 -258 5863 5450 353 330 189 30 chr5 200072246 200072643 -3012889 - L1ME4a LINE L1 -39 6082 5623 192 163 0 0 chr5 200072679 200072722 -3012810 + T-rich Low_complexity Low_complexity 1 43 0 1042 65 0 0 chr5 200072722 200072860 -3012672 - L1PA3 LINE L1 0 6155 6018 2191 107 4 0 chr5 200072860 200073141 -3012391 - AluSx SINE Alu -28 284 3 193 175 25 0 chr5 200073776 200073816 -3011716 - MIR3 SINE MIR -10 198 158 301 245 32 90 chr5 200073825 200073882 -3011650 - MER5A DNA MER1_type -5 184 125 2349 99 0 7 chr5 200073882 200074185 -3011347 + AluSg1 SINE Alu 1 301 -8 301 245 32 90 chr5 200074185 200074282 -3011250 - MER5A DNA MER1_type -64 125 39 252 197 98 0 chr5 200074306 200074367 -3011165 - MIR3 SINE MIR -48 160 94 4073 220 140 21 chr5 200074424 200075363 -3010169 + L1MDa LINE L1 19 844 -5696 222 37 0 0 chr5 200075363 200075390 -3010142 + (GAA)n Simple_repeat Simple_repeat 1 27 0 4073 220 140 21 chr5 200075390 200075868 -3009664 + L1MDa LINE L1 844 1978 -4562 241 226 0 0 chr5 200075888 200075941 -3009591 - MIR SINE MIR -93 169 117 636 353 39 6 chr5 200076001 200076335 -3009197 + L1MC4a LINE L1 5659 6003 -1805 386 322 121 31 chr5 200076492 200076781 -3008751 + L1MC4a LINE L1 6280 6594 -1214 1668 199 64 38 chr5 200077678 200077856 -3007676 + MLT1C LTR MaLR 1 173 -294 2283 98 7 10 chr5 200077856 200078152 -3007380 + AluSx SINE Alu 5 299 -13 1668 199 64 38 chr5 200078152 200078425 -3007107 + MLT1C LTR MaLR 173 464 -3 522 221 44 15 chr5 200078500 200078636 -3006896 + Charlie8 DNA MER1_type 85 224 -2193 281 188 65 212 chr5 200079593 200079918 -3005614 - L1MC4 LINE L1 -1 8041 7765 1638 114 129 11 chr5 200080039 200080302 -3005230 - AluSg1 SINE Alu -15 294 1 809 293 45 45 chr5 200080535 200080917 -3004615 - L1ME LINE L1 -413 5740 5359 2195 102 0 10 chr5 200080971 200081264 -3004268 + AluY SINE Alu 1 290 -21 1505 206 109 46 chr5 200081436 200081815 -3003717 - L1MDa LINE L1 -5532 1008 654 2139 90 35 7 chr5 200081815 200082104 -3003428 - AluSx SINE Alu -15 297 1 1505 206 109 46 chr5 200082104 200082290 -3003242 - L1MDa LINE L1 -5886 654 100 469 259 37 54 chr5 200082433 200082730 -3002802 - L1ME LINE L1 -913 5216 4925 1582 189 0 66 chr5 200082747 200083080 -3002452 - AluJo SINE Alu -1 311 1 539 200 73 42 chr5 200083091 200083256 -3002276 - L1MA10 LINE L1 -2 6332 6163 1324 260 38 21 chr5 200083319 200083742 -3001790 - L1ME1 LINE L1 -167 5999 5570 1596 193 35 12 chr5 200083746 200084088 -3001444 - L1MC3 LINE L1 -248 7537 7188 2098 134 6 13 chr5 200084264 200084578 -3000954 - AluSx SINE Alu 0 312 1 287 283 25 13 chr5 200084581 200084740 -3000792 - L1ME LINE L1 -3866 2263 2103 258 313 48 24 chr5 200084939 200085105 -3000427 - L1M2 LINE L1 -4345 2504 2335 727 123 14 65 chr5 200085107 200085125 -3000407 - FLAM_C SINE Alu -169 133 116 516 16 0 0 chr5 200085125 200085186 -3000346 + (TA)n Simple_repeat Simple_repeat 2 62 0 727 123 14 65 chr5 200085186 200085305 -3000227 - FLAM_C SINE Alu -186 116 3 369 282 133 66 chr5 200085387 200086021 -2999511 - L1ME LINE L1 -4862 1257 582 738 261 74 13 chr5 200087363 200087593 -2997939 + MIR SINE MIR 18 261 -1 192 40 0 0 chr5 200087918 200087943 -2997589 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 1869 87 45 0 chr5 200088718 200088960 -2996572 - AluSx SINE Alu -22 290 38 196 333 61 10 chr5 200090271 200090370 -2995162 - L2 LINE L2 -51 3262 3159 663 263 84 5 chr5 200090387 200090600 -2994932 - MIR SINE MIR -11 251 22 608 206 7 35 chr5 200090677 200090818 -2994714 - L1MB7 LINE L1 -240 5944 5808 1740 181 89 3 chr5 200090818 200091177 -2994355 - MLT1B LTR MaLR 0 390 1 36 44 0 15 chr5 200091335 200091357 -2994175 + AT_rich Low_complexity Low_complexity 1 22 -45 2348 90 0 0 chr5 200091357 200091646 -2993886 + AluSx SINE Alu 1 289 -23 36 44 0 15 chr5 200091646 200091691 -2993841 + AT_rich Low_complexity Low_complexity 22 67 0 401 165 53 18 chr5 200092214 200092384 -2993148 + CT-rich Low_complexity Low_complexity 1 176 0 342 177 6 1 chr5 200092466 200092555 -2992977 - L1ME1 LINE L1 -1 6183 6082 290 102 0 0 chr5 200092554 200092603 -2992929 - L1MB4 LINE L1 0 6180 6132 * 1187 158 50 20 chr5 200092603 200092805 -2992727 - AluJo SINE Alu -18 294 87 2415 185 13 50 chr5 200092807 200093136 -2992396 - L1MB3 LINE L1 -47 6136 5833 2380 82 33 7 chr5 200093136 200093440 -2992092 - AluSq SINE Alu -1 312 1 2415 185 13 50 chr5 200093440 200093656 -2991876 - L1MB3 LINE L1 -350 5833 5611 2106 183 85 47 chr5 200093832 200094347 -2991185 - MLT2B3 LTR ERVL 0 554 20 269 141 94 0 chr5 200094639 200094703 -2990829 + L1MA10 LINE L1 6258 6327 -7 306 295 141 13 chr5 200095281 200095430 -2990102 - MIR SINE MIR -20 242 75 1234 106 0 6 chr5 200095898 200096102 -2989430 + AluSq SINE Alu 125 327 0 2349 92 6 29 chr5 200097585 200097900 -2987632 - AluSx SINE Alu -2 310 3 2130 120 3 13 chr5 200097902 200098202 -2987330 - AluJo SINE Alu -15 297 1 2488 73 3 0 chr5 200098550 200098851 -2986681 - AluY SINE Alu -9 302 1 206 313 22 78 chr5 200098854 200099033 -2986499 - L2 LINE L2 -101 3171 3003 2128 105 49 0 chr5 200099169 200099454 -2986078 + AluSq SINE Alu 1 299 -14 23 68 0 0 chr5 200099796 200099840 -2985692 + AT_rich Low_complexity Low_complexity 1 44 0 1151 153 0 0 chr5 200100293 200100463 -2985069 - FRAM SINE Alu -2 174 5 2325 87 0 29 chr5 200100469 200100781 -2984751 - AluY SINE Alu -8 303 1 3929 168 75 30 chr5 200100790 200101359 -2984173 - L1MB4 LINE L1 -38 6142 5600 1856 65 8 0 chr5 200101359 200101607 -2983925 - L1PA5 LINE L1 0 6154 5905 3929 168 75 30 chr5 200101607 200101854 -2983678 - L1MB4 LINE L1 -580 5600 5366 198 0 0 0 chr5 200101854 200101876 -2983656 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3929 168 75 30 chr5 200101876 200102178 -2983354 - L1MB4 LINE L1 -814 5366 4971 2060 116 55 7 chr5 200102235 200102528 -2983004 - AluSx SINE Alu 0 312 6 399 233 29 122 chr5 200103161 200103259 -2982273 - L1MC5 LINE L1 -106 7855 7749 1624 194 35 15 chr5 200103259 200103599 -2981933 + MER7A DNA MER2_type 1 345 -1 399 233 29 122 chr5 200103599 200103779 -2981753 - L1MC5 LINE L1 -212 7749 7603 513 269 19 13 chr5 200104047 200104203 -2981329 + MIR SINE MIR 14 170 -92 225 0 0 0 chr5 200104271 200104296 -2981236 + (CAT)n Simple_repeat Simple_repeat 3 27 0 253 284 40 0 chr5 200105470 200105544 -2979988 + MIR SINE MIR 112 188 -74 242 293 152 0 chr5 200106351 200106450 -2979082 - MIR SINE MIR -111 151 38 407 365 55 0 chr5 200106454 200106635 -2978897 + MIR SINE MIR 49 239 -23 1810 235 121 45 chr5 200106770 200106920 -2978612 + MLT1E1 LTR MaLR 4 141 -513 1559 194 58 35 chr5 200106920 200107353 -2978179 - LTR47B LTR ERVL 0 443 1 1810 235 121 45 chr5 200107353 200107807 -2977725 + MLT1E1 LTR MaLR 141 654 0 487 206 48 32 chr5 200107840 200107966 -2977566 - MLT1E LTR MaLR -8 585 458 283 289 31 0 chr5 200107966 200108063 -2977469 + L2 LINE L2 2956 3055 -258 476 265 0 6 chr5 200108347 200108528 -2977004 + (CA)n Simple_repeat Simple_repeat 1 180 0 303 270 0 30 chr5 200108541 200108641 -2976891 + (CA)n Simple_repeat Simple_repeat 1 97 0 588 307 45 0 chr5 200109558 200109734 -2975798 - MIR SINE MIR -32 230 47 2223 115 0 0 chr5 200109753 200110049 -2975483 - AluSg SINE Alu -14 296 1 2398 110 0 0 chr5 200110343 200110651 -2974881 + AluSx SINE Alu 1 308 -4 1623 176 42 3 chr5 200111034 200111318 -2974214 + AluJo SINE Alu 1 295 -17 2415 98 3 0 chr5 200111581 200111887 -2973645 + AluSx SINE Alu 1 307 -5 1067 132 0 0 chr5 200112359 200112511 -2973021 + FRAM SINE Alu 22 173 -3 405 296 134 89 chr5 200113631 200114124 -2971408 + MLT1K LTR MaLR 3 517 -71 1483 177 9 85 chr5 200114145 200114306 -2971226 - AluJo SINE Alu -15 297 125 1904 133 57 0 chr5 200114306 200114585 -2970947 - AluSx SINE Alu -16 296 2 351 0 0 0 chr5 200114585 200114624 -2970908 + (CA)n Simple_repeat Simple_repeat 1 39 0 1483 177 9 85 chr5 200114624 200114778 -2970754 - AluJo SINE Alu -185 127 5 522 244 65 66 chr5 200117862 200118228 -2967304 + MLT1L LTR MaLR 3 398 -217 219 211 13 40 chr5 200122230 200122306 -2963226 + (CCG)n Simple_repeat Simple_repeat 3 76 0 25 51 0 0 chr5 200122573 200122612 -2962920 + GC_rich Low_complexity Low_complexity 1 39 0 277 333 33 33 chr5 200123887 200124070 -2961462 + L2 LINE L2 2895 3077 -236 554 288 57 22 chr5 200124159 200124592 -2960940 - LTR33 LTR ERVL 0 521 6 826 365 49 10 chr5 200124698 200125205 -2960327 + HERV16 LTR ERVL 4305 4831 -933 351 314 0 10 chr5 200125236 200125338 -2960194 + HERV16 LTR ERVL 4852 4952 -702 252 260 0 14 chr5 200125369 200125442 -2960090 + HERV16 LTR ERVL 4551 4622 -374 248 159 29 43 chr5 200125544 200125613 -2959919 + MER20B DNA MER1_type 716 783 0 22 0 0 0 chr5 200125783 200125805 -2959727 + AT_rich Low_complexity Low_complexity 1 22 0 877 122 8 8 chr5 200125914 200126068 -2959464 - FLAM_C SINE Alu 0 154 1 3660 237 119 26 chr5 200126095 200127847 -2957685 + L1MEc LINE L1 62 1853 -4362 1147 207 98 11 chr5 200127880 200128228 -2957304 + L1MEc LINE L1 2039 2416 -3980 307 270 153 0 chr5 200128387 200128524 -2957008 - MIR SINE MIR -51 211 54 2450 97 0 0 chr5 200128952 200129252 -2956280 - AluSq SINE Alu -13 300 1 2096 105 18 3 chr5 200129518 200129826 -2955706 + AluSq SINE Alu 1 312 0 1876 131 108 17 chr5 200130298 200130642 -2954890 + THE1C LTR MaLR 1 375 0 375 272 140 34 chr5 200131142 200131407 -2954125 + L1MC5 LINE L1 7630 7922 -39 900 198 0 6 chr5 200131570 200131732 -2953800 + FRAM SINE Alu 1 161 -5 2198 107 7 0 chr5 200132226 200132526 -2953006 - AluY SINE Alu -5 306 5 207 0 0 0 chr5 200133108 200133131 -2952401 + (A)n Simple_repeat Simple_repeat 1 23 0 2064 131 0 3 chr5 200133930 200134227 -2951305 + AluSx SINE Alu 1 296 -16 2196 85 3 7 chr5 200134420 200134732 -2950800 - AluSx SINE Alu 0 311 1 21 0 0 0 chr5 200135901 200135922 -2949610 + AT_rich Low_complexity Low_complexity 1 21 0 196 291 73 36 chr5 200136315 200136425 -2949107 - MER5B DNA MER1_type -62 116 3 192 40 0 0 chr5 200136570 200136595 -2948937 + (A)n Simple_repeat Simple_repeat 1 25 0 1739 121 53 32 chr5 200136621 200136902 -2948630 - MER1B DNA MER1_type 0 339 53 25 31 0 0 chr5 200136936 200136968 -2948564 + AT_rich Low_complexity Low_complexity 1 32 0 2277 115 0 0 chr5 200136971 200137266 -2948266 + AluSx SINE Alu 1 295 -17 537 211 26 4 chr5 200137972 200138121 -2947411 - MER58C DNA MER1_type 0 215 1 2159 117 13 3 chr5 200138804 200139102 -2946430 + AluSx SINE Alu 1 301 -11 1530 77 10 0 chr5 200139625 200139821 -2945711 - AluY SINE Alu -2 309 112 21 57 0 0 chr5 200141286 200141321 -2944211 + AT_rich Low_complexity Low_complexity 1 35 0 238 135 0 0 chr5 200141321 200141358 -2944174 - L1MB1 LINE L1 -6 6162 6126 237 33 0 0 chr5 200141943 200141973 -2943559 + (T)n Simple_repeat Simple_repeat 1 30 0 2162 88 0 72 chr5 200142158 200142478 -2943054 - AluSg SINE Alu -13 297 1 1548 232 89 114 chr5 200142783 200143635 -2941897 + L1MCb LINE L1 3 833 -5212 514 209 105 20 chr5 200143673 200143826 -2941706 + L1M4 LINE L1 3772 3937 -2209 2383 80 0 3 chr5 200143945 200144244 -2941288 - AluY SINE Alu -13 298 1 409 223 28 0 chr5 200144320 200144440 -2941092 + MLT1E3 LTR MaLR 55 227 -427 206 327 50 10 chr5 200144453 200144554 -2940978 - MIR SINE MIR -60 148 44 2184 121 3 0 chr5 200144573 200144878 -2940654 + AluSg SINE Alu 1 306 -4 1584 213 17 30 chr5 200145325 200145687 -2939845 - MLT1A1 LTR MaLR 0 365 9 1134 165 8 60 chr5 200145821 200145917 -2939615 - L1MA4 LINE L1 -35 6265 6165 2447 83 0 3 chr5 200145917 200146218 -2939314 - AluSc SINE Alu -9 300 1 1134 165 8 60 chr5 200146218 200146387 -2939145 - L1MA4 LINE L1 -135 6165 6014 2307 98 0 7 chr5 200147022 200147319 -2938213 + AluSg SINE Alu 1 295 -15 2347 100 0 0 chr5 200147321 200147631 -2937901 + AluSg SINE Alu 1 310 0 22 0 0 0 chr5 200147815 200147837 -2937695 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 45 chr5 200147860 200147886 -2937646 + AT_rich Low_complexity Low_complexity 1 26 -16 2093 94 47 0 chr5 200147886 200148162 -2937370 + AluSp SINE Alu 1 289 -24 29 0 0 45 chr5 200148162 200148179 -2937353 + AT_rich Low_complexity Low_complexity 26 42 0 287 113 16 0 chr5 200148179 200148241 -2937291 + (TA)n Simple_repeat Simple_repeat 1 63 0 1080 147 0 0 chr5 200148241 200148398 -2937134 - AluSq SINE Alu -25 288 132 25 0 0 0 chr5 200148398 200148423 -2937109 + AT_rich Low_complexity Low_complexity 1 25 0 2453 56 0 13 chr5 200148642 200148947 -2936585 + AluY SINE Alu 1 301 -10 1873 135 66 0 chr5 200150166 200150455 -2935077 + AluSx SINE Alu 1 308 -4 1695 162 0 42 chr5 200150986 200151294 -2934238 + AluJo SINE Alu 1 295 -17 488 282 87 45 chr5 200151768 200152300 -2933232 - L1MEc LINE L1 -5763 633 80 2207 102 3 10 chr5 200152301 200152595 -2932937 + AluSx SINE Alu 1 292 -20 2448 82 7 0 chr5 200154487 200154790 -2930742 - AluSq SINE Alu -8 305 1 3253 120 90 47 chr5 200154941 200155499 -2930033 + LTR12 LTR ERV1 1 582 -132 2064 114 10 10 chr5 200155506 200155796 -2929736 - AluSp SINE Alu -23 290 1 2565 206 58 21 chr5 200155806 200156426 -2929106 - L1MD1 LINE L1 0 6242 5600 2270 104 0 0 chr5 200156427 200156726 -2928806 - AluY SINE Alu -12 299 1 973 229 62 43 chr5 200156726 200157097 -2928435 - L1MD1 LINE L1 -1084 5062 4685 580 279 64 5 chr5 200157075 200157294 -2928238 - L1MD1 LINE L1 -2295 3851 3620 * 2123 144 20 30 chr5 200157282 200157677 -2927855 + L1MA9 LINE L1 5865 6255 -57 747 54 0 0 chr5 200157688 200157780 -2927752 - AluY SINE Alu -23 288 197 3511 171 23 13 chr5 200157780 200158393 -2927139 - ERVL LTR ERVL -3061 2703 2085 2991 157 56 58 chr5 200158437 200159055 -2926477 + L1MA9 LINE L1 5569 6187 -147 2010 194 49 5 chr5 200159055 200159463 -2926069 + MSTB LTR MaLR 1 426 0 2991 157 56 58 chr5 200159463 200159518 -2926014 + L1MA9 LINE L1 6187 6241 -93 1720 160 0 18 chr5 200159518 200159799 -2925733 - AluSx SINE Alu -36 276 1 2991 157 56 58 chr5 200159799 200159900 -2925632 + L1MA9 LINE L1 6241 6334 0 2505 72 10 0 chr5 200160067 200160373 -2925159 - AluY SINE Alu -2 309 1 2009 110 3 17 chr5 200160409 200160709 -2924823 + AluSx SINE Alu 1 296 -16 2186 39 4 4 chr5 200160809 200161067 -2924465 - AluY SINE Alu -53 258 1 2234 78 24 14 chr5 200161228 200161524 -2924008 - AluSg SINE Alu -11 299 1 1299 250 93 10 chr5 200161896 200162196 -2923336 + MER21B LTR ERV1 13 337 -526 369 243 97 35 chr5 200162235 200162379 -2923153 + MLT1I LTR MaLR 60 212 -197 1866 123 0 31 chr5 200162777 200163109 -2922423 - AluSx SINE Alu 0 323 1 819 286 104 37 chr5 200163549 200163727 -2921805 + L2 LINE L2 1328 1493 -1821 753 255 66 0 chr5 200163727 200163923 -2921609 - MER3 DNA MER1_type 0 209 1 819 286 104 37 chr5 200163923 200164254 -2921278 + L2 LINE L2 1493 1871 -1443 726 240 83 52 chr5 200164271 200164551 -2920981 + L1ME LINE L1 1471 1789 -5168 2377 80 3 13 chr5 200164551 200164852 -2920680 + AluSx SINE Alu 1 298 -14 726 240 83 52 chr5 200164852 200165068 -2920464 + L1ME LINE L1 1789 1997 -4960 2093 133 0 0 chr5 200165073 200165366 -2920166 - AluSg1 SINE Alu -16 293 1 1418 140 37 0 chr5 200165373 200165616 -2919916 - L1M3 LINE L1 -513 5821 5570 491 108 14 0 chr5 200165617 200165691 -2919841 + L1MB1 LINE L1 5876 5950 -218 1116 82 0 0 chr5 200165691 200165825 -2919707 + AluSg SINE Alu 1 134 -176 2134 130 3 0 chr5 200165825 200166118 -2919414 + AluSx SINE Alu 1 294 -18 1175 195 5 0 chr5 200166122 200166337 -2919195 + L1MB1 LINE L1 5945 6160 -29 2146 92 3 36 chr5 200166337 200166642 -2918890 - AluSq SINE Alu -18 295 1 501 164 181 9 chr5 200166642 200166758 -2918774 - FLAM_A SINE Alu -6 136 1 925 115 7 40 chr5 200166792 200166940 -2918592 - FLAM_C SINE Alu 0 143 1 778 270 134 55 chr5 200167033 200167350 -2918182 + L1ME LINE L1 1978 2269 -4869 2482 53 0 3 chr5 200167350 200167659 -2917873 + AluY SINE Alu 1 308 0 778 270 134 55 chr5 200167659 200167823 -2917709 + L1ME LINE L1 2269 2419 -4719 2204 116 0 13 chr5 200167823 200168124 -2917408 - AluSx SINE Alu -15 297 1 778 270 134 55 chr5 200168124 200168224 -2917308 + L1ME LINE L1 2419 2756 -4382 332 286 27 14 chr5 200168232 200168379 -2917153 + L1ME LINE L1 2971 3119 -3838 1446 203 3 43 chr5 200168390 200168690 -2916842 + AluJo SINE Alu 4 291 -21 1071 130 37 0 chr5 200168690 200168851 -2916681 + AluJb SINE Alu 126 292 -20 474 253 38 44 chr5 200168870 200168895 -2916637 + L1ME LINE L1 3146 3170 -3787 2358 90 0 7 chr5 200168895 200169194 -2916338 + AluSx SINE Alu 1 297 -15 474 253 38 44 chr5 200169194 200169326 -2916206 + L1ME LINE L1 3170 3302 -3655 526 264 75 19 chr5 200169346 200169558 -2915974 + L1ME LINE L1 11 234 -6625 271 254 5 138 chr5 200169626 200169815 -2915717 + L1ME LINE L1 759 922 -5937 1631 109 24 4 chr5 200169922 200170170 -2915362 - MER57B LTR ERV1 0 434 182 * 1913 97 43 0 chr5 200170157 200170414 -2915118 - MER57B LTR ERV1 -166 268 1 2365 224 83 28 chr5 200170597 200170675 -2914857 + L1MD1 LINE L1 5488 5560 -682 2437 74 3 0 chr5 200170675 200170971 -2914561 + AluSc SINE Alu 1 297 -12 2365 224 83 28 chr5 200170971 200171606 -2913926 + L1MD1 LINE L1 5560 6240 -2 2059 228 56 16 chr5 200171743 200172066 -2913466 + L1ME LINE L1 4473 4782 -2175 2206 54 69 0 chr5 200172066 200172370 -2913162 + AluY SINE Alu 1 311 0 2059 228 56 16 chr5 200172370 200172651 -2912881 + L1ME LINE L1 4782 5101 -1856 600 143 161 0 chr5 200172705 200172817 -2912715 + MLT1C LTR MaLR 52 181 -286 1633 99 26 4 chr5 200172819 200173051 -2912481 - AluSx SINE Alu -75 237 1 642 206 33 34 chr5 200173051 200173290 -2912242 + L1M4 LINE L1 2750 3033 -3113 2689 188 78 51 chr5 200173302 200173574 -2911958 - L1MCb LINE L1 -4851 1194 931 4090 89 37 25 chr5 200173574 200174172 -2911360 + LTR14B LTR ERVK 4 608 0 2689 188 78 51 chr5 200174172 200174230 -2911302 - L1MCb LINE L1 -5114 931 876 2132 120 0 7 chr5 200174230 200174530 -2911002 - AluSx SINE Alu -12 300 3 2689 188 78 51 chr5 200174530 200175079 -2910453 - L1MCb LINE L1 -5169 876 502 500 303 48 84 chr5 200175102 200175486 -2910046 - L1ME LINE L1 -4597 1414 739 386 229 69 8 chr5 200177309 200177440 -2908092 + MIR3 SINE MIR 16 154 -54 943 288 169 31 chr5 200177626 200178529 -2907003 + L2 LINE L2 2301 3313 0 369 306 93 29 chr5 200178753 200178889 -2906643 - L2 LINE L2 -374 2940 2814 2193 178 45 43 chr5 200178889 200179355 -2906177 + MLT1C LTR MaLR 1 467 0 369 306 93 29 chr5 200179355 200179447 -2906085 - L2 LINE L2 -500 2814 2729 1844 159 39 22 chr5 200179447 200179811 -2905721 - L1MB3 LINE L1 -8 6175 5806 369 306 93 29 chr5 200179811 200179892 -2905640 - L2 LINE L2 -585 2729 2610 7519 33 1 1 chr5 200180835 200182406 -2903126 - L1PA4 LINE L1 0 6155 4610 1940 122 4 4 chr5 200182406 200182684 -2902848 - AluSc SINE Alu -31 278 1 1546 177 27 7 chr5 200183541 200183840 -2901692 + AluJb SINE Alu 1 305 -7 346 302 50 29 chr5 200183972 200184111 -2901421 - MIR SINE MIR -56 206 65 661 188 9 0 chr5 200184175 200184287 -2901245 - MER81 DNA DNA -1 113 1 2143 108 10 0 chr5 200184379 200184675 -2900857 + AluSg SINE Alu 1 299 -11 3361 125 11 39 chr5 200185709 200186151 -2899381 + MER41A LTR ERV1 1 425 -129 2517 33 0 0 chr5 200186151 200186450 -2899082 - AluY SINE Alu -12 299 1 3361 125 11 39 chr5 200186450 200186577 -2898955 + MER41A LTR ERV1 425 554 0 371 41 20 0 chr5 200186638 200186687 -2898845 - MADE1 DNA Mariner 0 80 31 1694 108 112 7 chr5 200186946 200187224 -2898308 + AluSg1 SINE Alu 3 309 0 256 298 65 32 chr5 200187506 200187630 -2897902 - MIR SINE MIR -37 225 98 2149 67 0 3 chr5 200187631 200187948 -2897584 + AluY SINE Alu 1 316 0 363 273 79 135 chr5 200188115 200188471 -2897061 + L2 LINE L2 2937 3272 0 289 399 39 0 chr5 200188477 200188680 -2896852 + MIR SINE MIR 30 240 -22 2052 112 0 0 chr5 200188759 200189063 -2896469 + AluSg SINE Alu 5 308 0 300 93 37 0 chr5 200189163 200189217 -2896315 + MER2 DNA MER2_type 156 211 -134 1689 164 7 0 chr5 200189279 200189554 -2895978 - AluJo SINE Alu -35 277 1 433 167 0 0 chr5 200189569 200189635 -2895897 + MER2 DNA MER2_type 280 345 0 488 279 76 6 chr5 200189647 200189805 -2895727 + MIR SINE MIR 49 217 -45 307 330 30 0 chr5 200189883 200189983 -2895549 + MER5B DNA MER1_type 17 119 -59 291 167 17 0 chr5 200189996 200190056 -2895476 + LTR33 LTR ERVL 20 80 -441 612 199 106 7 chr5 200190245 200190386 -2895146 - AluJb SINE Alu -21 291 137 1458 210 155 15 chr5 200190397 200190854 -2894678 - MER74B LTR ERVL -25 597 77 2255 92 10 0 chr5 200190857 200191161 -2894371 + AluSq SINE Alu 1 307 -6 243 263 53 11 chr5 200191223 200191318 -2894214 + LTR33 LTR ERVL 423 521 0 2810 182 34 0 chr5 200193125 200193652 -2891880 + L1MB3 LINE L1 5631 6175 -8 952 248 91 6 chr5 200194421 200194740 -2890792 - MER113 DNA MER1_type? -149 372 27 368 221 188 28 chr5 200195338 200195514 -2890018 - MIR SINE MIR -30 232 36 257 282 146 0 chr5 200196098 200196201 -2889331 - MIR SINE MIR -37 225 108 204 217 17 50 chr5 200196681 200196741 -2888791 + L2 LINE L2 3213 3270 -43 326 279 136 43 chr5 200197447 200197587 -2887945 + MIR SINE MIR 30 182 -80 320 280 99 33 chr5 200197632 200197814 -2887718 + Charlie8 DNA MER1_type 39 232 -2185 2247 178 25 5 chr5 200197915 200198353 -2887179 + L1MB3 LINE L1 5733 6179 -4 305 308 50 17 chr5 200198709 200198829 -2886703 + MIR SINE MIR 47 170 -92 271 308 26 0 chr5 200200293 200200371 -2885161 - L2 LINE L2 -3 3269 3190 284 252 67 42 chr5 200200613 200200732 -2884800 - MIR SINE MIR -25 237 116 416 235 177 16 chr5 200202332 200202575 -2882957 - L1ME4a LINE L1 -3 6118 5837 2081 115 0 0 chr5 200202628 200202914 -2882618 - AluSx SINE Alu -24 288 3 3023 221 101 77 chr5 200202920 200203702 -2881830 - L1MC5 LINE L1 -36 7925 7163 245 29 29 0 chr5 200203702 200203736 -2881796 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2028 128 17 0 chr5 200203738 200204036 -2881496 - AluSx SINE Alu -9 303 1 3023 221 101 77 chr5 200204036 200204752 -2880780 - L1MC5 LINE L1 -798 7163 6396 236 270 165 51 chr5 200204812 200204944 -2880588 - L1ME4a LINE L1 -260 5861 5745 2257 98 0 3 chr5 200204944 200205249 -2880283 + AluSx SINE Alu 1 304 -8 236 270 165 51 chr5 200205249 200205353 -2880179 - L1ME4a LINE L1 -376 5745 5598 328 299 44 64 chr5 200205578 200205747 -2879785 - L1ME4a LINE L1 -830 5316 5150 2325 65 3 0 chr5 200205747 200206041 -2879491 - AluSp SINE Alu -18 295 1 328 299 44 64 chr5 200206041 200206075 -2879457 - L1ME4a LINE L1 -996 5150 5117 1095 198 164 39 chr5 200207245 200207660 -2877872 + MLT1C LTR MaLR 1 467 0 314 200 31 0 chr5 200207861 200207926 -2877606 - MIR SINE MIR -102 160 94 192 220 200 0 chr5 200208614 200208664 -2876868 + MIR SINE MIR 2 61 -201 204 374 0 0 chr5 200209146 200209269 -2876263 + (CAGA)n Simple_repeat Simple_repeat 4 126 0 328 333 0 0 chr5 200209433 200209571 -2875961 + (CAGA)n Simple_repeat Simple_repeat 1 138 0 372 343 0 0 chr5 200209892 200210070 -2875462 + (TCTG)n Simple_repeat Simple_repeat 1 178 0 204 184 0 0 chr5 200210381 200210430 -2875102 + (TCTG)n Simple_repeat Simple_repeat 1 49 0 310 335 6 6 chr5 200210782 200210958 -2874574 + (TCTG)n Simple_repeat Simple_repeat 1 176 0 230 299 0 51 chr5 200211020 200211076 -2874456 + (TCTG)n Simple_repeat Simple_repeat 1 58 -72 2215 100 3 0 chr5 200211076 200211377 -2874155 - AluSx SINE Alu -10 302 1 230 299 0 51 chr5 200211377 200211457 -2874075 + (TCTG)n Simple_repeat Simple_repeat 58 130 0 2097 135 0 0 chr5 200212005 200212308 -2873224 - AluSx SINE Alu -9 303 1 2666 203 23 16 chr5 200212758 200213334 -2872198 + L1MA10 LINE L1 4749 5328 -818 2122 97 0 10 chr5 200213336 200213636 -2871896 + AluSx SINE Alu 1 297 -15 4413 188 16 20 chr5 200213637 200213690 -2871842 + L1MA10 LINE L1 5433 5485 -849 2226 85 10 0 chr5 200213690 200213985 -2871547 + AluSp SINE Alu 1 298 -15 4413 188 16 20 chr5 200213985 200214837 -2870695 + L1MA10 LINE L1 5485 6334 0 2081 112 0 3 chr5 200215051 200215345 -2870187 - AluSx SINE Alu -9 303 11 411 98 33 0 chr5 200215345 200215397 -2870135 - Alu SINE Alu -261 57 1 191 204 0 93 chr5 200216542 200216596 -2868936 + MER5A DNA MER1_type 9 57 -132 494 178 220 34 chr5 200216608 200216726 -2868806 - FLAM_C SINE Alu -2 141 2 319 194 16 0 chr5 200216726 200216788 -2868744 + MER5A DNA MER1_type 47 109 -80 238 248 148 10 chr5 200216834 200216935 -2868597 - MER112 DNA MER1_type 0 260 146 369 235 117 14 chr5 200217028 200217170 -2868362 - MLT1J2 LTR MaLR -189 220 67 269 287 32 11 chr5 200217222 200217316 -2868216 + L2 LINE L2 3218 3313 0 1916 91 7 27 chr5 200218924 200219221 -2866311 + AluSq SINE Alu 1 291 -22 29 60 0 0 chr5 200219223 200219273 -2866259 + AT_rich Low_complexity Low_complexity 1 50 0 207 0 0 0 chr5 200219273 200219296 -2866236 + (TA)n Simple_repeat Simple_repeat 2 24 0 1187 124 0 0 chr5 200219296 200219465 -2866067 + AluSg/x SINE Alu 132 300 -12 2104 99 0 3 chr5 200219549 200219842 -2865690 + AluSg SINE Alu 3 294 -16 950 96 0 22 chr5 200220177 200220312 -2865220 + AluJb SINE Alu 5 136 -176 2229 81 3 3 chr5 200220328 200220625 -2864907 + AluSq SINE Alu 1 297 -16 336 221 26 0 chr5 200220643 200220720 -2864812 - HsTC2 DNA Tc2 0 1898 1820 916 188 24 24 chr5 200220904 200221112 -2864420 - MER3 DNA MER1_type -1 208 1 23 33 0 0 chr5 200222650 200222680 -2862852 + AT_rich Low_complexity Low_complexity 1 30 0 2058 79 11 0 chr5 200222680 200222985 -2862547 + AluY SINE Alu 2 309 0 277 263 136 57 chr5 200223701 200223948 -2861584 - L2 LINE L2 -3 3269 2927 754 217 152 16 chr5 200224245 200224489 -2861043 + Charlie2 DNA MER1_type 1871 2147 -715 722 130 0 17 chr5 200224620 200224735 -2860797 + FLAM_C SINE Alu 14 126 -17 444 225 70 48 chr5 200224792 200224979 -2860553 + L1MD3 LINE L1 7771 7961 -34 789 192 245 16 chr5 200224979 200225297 -2860235 + Charlie2 DNA MER1_type 2404 2794 -68 24 0 0 0 chr5 200225623 200225647 -2859885 + AT_rich Low_complexity Low_complexity 1 24 0 2130 99 0 69 chr5 200425695 200426027 -2659505 + AluSg SINE Alu 1 309 -1 25 31 0 0 chr5 200426548 200426580 -2658952 + GC_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 200426655 200426684 -2658848 + GC_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr5 200426862 200426908 -2658624 + (CCCCAG)n Simple_repeat Simple_repeat 6 51 0 330 105 0 35 chr5 200426960 200427046 -2658486 + (CGGG)n Simple_repeat Simple_repeat 4 86 0 2077 129 14 0 chr5 200427198 200427492 -2658040 - AluSx SINE Alu -14 298 1 2579 115 7 38 chr5 200427492 200427713 -2657819 - Tigger1 DNA MER2_type -1797 621 418 1989 136 34 0 chr5 200427713 200428007 -2657525 - AluSx SINE Alu 0 312 9 2579 115 7 38 chr5 200428007 200428205 -2657327 - Tigger1 DNA MER2_type -2000 418 215 1519 162 53 3 chr5 200429508 200429848 -2655684 + Charlie5 DNA MER1_type 2265 2621 0 471 335 68 16 chr5 200429857 200430048 -2655484 + L1M4 LINE L1 3599 3799 -2347 466 181 64 0 chr5 200430197 200430291 -2655241 + MER2 DNA MER2_type 1 100 -245 316 229 43 0 chr5 200430293 200430363 -2655169 + Tigger5 DNA MER2_type 5 77 -2246 281 222 0 0 chr5 200430364 200430418 -2655114 - Tigger5 DNA MER2_type -3 2320 2267 * 331 200 0 27 chr5 200430413 200430488 -2655044 + Tigger5 DNA MER2_type 2251 2323 0 975 73 0 119 chr5 200430731 200430882 -2654650 + AluSq/x SINE Alu 1 133 -179 1355 102 11 5 chr5 200430919 200431106 -2654426 + AluSp SINE Alu 121 308 -5 205 214 48 4 chr5 200431307 200431372 -2654160 + MIR SINE MIR 52 123 -85 517 172 0 11 chr5 200431442 200431535 -2653997 - AluJ/FLAM SINE Alu -219 93 2 2383 97 3 0 chr5 200431742 200432042 -2653490 - AluSx SINE Alu -11 301 1 2271 119 3 0 chr5 200432170 200432473 -2653059 - AluSp SINE Alu -9 304 1 2212 101 7 20 chr5 200432928 200433226 -2652306 - AluSx SINE Alu -18 294 1 185 226 177 0 chr5 200433271 200433333 -2652199 + MIR SINE MIR 91 163 -99 457 148 225 106 chr5 200433624 200433766 -2651766 - MER45 DNA AcHobo -794 159 1 353 220 50 10 chr5 200433766 200433866 -2651666 + MIR SINE MIR 159 262 0 181 204 182 0 chr5 200433906 200433950 -2651582 - L2 LINE L2 0 3313 3262 1644 93 5 5 chr5 200434098 200434312 -2651220 - AluY SINE Alu -97 214 1 671 210 20 147 chr5 200434347 200434612 -2650920 + L1MC5 LINE L1 6744 6956 -1005 1435 276 55 9 chr5 200434612 200435141 -2650391 + MLT1H1 LTR MaLR 1 553 -2 671 210 20 147 chr5 200435141 200435223 -2650309 + L1MC5 LINE L1 6956 7047 -914 2461 86 0 10 chr5 200435243 200435556 -2649976 + AluY SINE Alu 1 310 -1 456 268 13 0 chr5 200435565 200435730 -2649802 + L1MB8 LINE L1 3319 3485 -2661 370 143 46 9 chr5 200435784 200435889 -2649643 + AluJb SINE Alu 1 135 -167 2823 198 103 20 chr5 200435919 200435980 -2649552 + L1MB8 LINE L1 5115 5170 -1008 3907 151 54 44 chr5 200435980 200436754 -2648778 + LTR1 LTR ERV1 1 782 -3 2823 198 103 20 chr5 200436754 200437226 -2648306 + L1MB8 LINE L1 5170 5601 -577 2456 69 0 16 chr5 200437226 200437532 -2648000 + AluY SINE Alu 5 305 -6 2823 198 103 20 chr5 200437532 200437867 -2647665 + L1MB8 LINE L1 5601 6058 -120 1855 135 0 29 chr5 200437868 200438142 -2647390 + AluSx SINE Alu 1 266 -46 185 81 0 27 chr5 200438250 200438287 -2647245 + (CGGG)n Simple_repeat Simple_repeat 2 37 0 222 298 83 12 chr5 200438831 200438915 -2646617 + MIR3 SINE MIR 71 160 -48 1074 154 135 22 chr5 200438930 200439026 -2646506 + AluJb SINE Alu 1 85 -217 207 0 0 0 chr5 200439026 200439049 -2646483 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1074 154 135 22 chr5 200439049 200439219 -2646313 + AluJb SINE Alu 85 297 -5 715 299 65 10 chr5 200439238 200439532 -2646000 + MER102b DNA MER1_type 7 316 -25 649 253 63 53 chr5 200439540 200439637 -2645895 + MER20B DNA MER1_type 6 101 -682 2488 52 0 29 chr5 200439637 200439946 -2645586 - AluY SINE Alu -11 300 1 2215 115 0 0 chr5 200439951 200440246 -2645286 - AluSc SINE Alu -14 295 1 649 253 63 53 chr5 200440246 200440443 -2645089 + MER20B DNA MER1_type 104 309 -474 548 233 64 14 chr5 200440448 200440772 -2644760 - MLT1I LTR MaLR -15 408 1 274 158 333 9 chr5 200440882 200440940 -2644592 + Tigger1 DNA MER2_type 6 44 -2374 2284 87 0 13 chr5 200440940 200441240 -2644292 + AluSq SINE Alu 1 296 -17 274 158 333 9 chr5 200441240 200441295 -2644237 + Tigger1 DNA MER2_type 44 156 -2262 1185 290 187 22 chr5 200441396 200442986 -2642546 + L2 LINE L2 1444 3309 -4 827 194 12 6 chr5 200443101 200443266 -2642266 - FRAM SINE Alu 0 166 1 1185 166 8 46 chr5 200443701 200443942 -2641590 - MER61A LTR ERV1 0 343 112 562 136 192 0 chr5 200444261 200444386 -2641146 - MER61A LTR ERV1 -194 149 1 705 117 0 0 chr5 200444881 200444984 -2640548 + AluSc SINE Alu 168 270 -39 31 0 0 0 chr5 200444990 200445021 -2640511 + AT_rich Low_complexity Low_complexity 1 31 0 1695 243 54 7 chr5 200445114 200445542 -2639990 + MLT1C LTR MaLR 18 465 -2 2382 68 31 0 chr5 200445953 200446246 -2639286 - AluY SINE Alu -9 302 1 1689 130 45 4 chr5 200446305 200446577 -2638955 - AluSq SINE Alu 0 310 29 2469 69 0 3 chr5 200446677 200446968 -2638564 + AluY SINE Alu 12 301 -10 2263 98 0 20 chr5 200448519 200448838 -2636694 + AluSx SINE Alu 1 312 0 207 363 116 0 chr5 200448951 200449097 -2636435 - MIR SINE MIR -14 248 86 2450 90 0 0 chr5 200449290 200449590 -2635942 + AluSx SINE Alu 1 300 -12 2171 107 0 0 chr5 200450334 200450638 -2634894 + AluSc SINE Alu 1 304 0 242 136 0 0 chr5 200450641 200450685 -2634847 - L1MB7 LINE L1 -15 6169 6126 1872 86 0 16 chr5 200450869 200451114 -2634418 - AluSq SINE Alu -48 265 25 872 171 45 13 chr5 200453507 200453791 -2631741 - MLT1A1 LTR MaLR -2 363 3 2611 63 0 0 chr5 200453838 200454138 -2631394 + AluY SINE Alu 1 300 -11 632 311 66 43 chr5 200454607 200455074 -2630458 - L1M4 LINE L1 -1768 4378 3894 2555 50 0 7 chr5 200455074 200455377 -2630155 + AluY SINE Alu 1 301 -10 632 311 66 43 chr5 200455377 200455468 -2630064 - L1M4 LINE L1 -2252 3894 3807 292 135 0 0 chr5 200455581 200455633 -2629899 + Tigger1 DNA MER2_type 702 753 -1665 * 529 159 84 0 chr5 200455628 200455710 -2629822 + Tigger1 DNA MER2_type 2134 2228 -190 2260 114 0 3 chr5 200455710 200456018 -2629514 - AluSc SINE Alu -2 307 1 529 159 84 0 chr5 200456018 200456042 -2629490 + Tigger1 DNA MER2_type 2228 2249 -169 1804 165 0 14 chr5 200456043 200456328 -2629204 - AluSx SINE Alu -26 286 6 1865 128 35 3 chr5 200456343 200456625 -2628907 - AluSx SINE Alu -21 291 1 1930 156 10 0 chr5 200456684 200456979 -2628553 + AluSx SINE Alu 1 298 -14 908 206 77 0 chr5 200457062 200457256 -2628276 + MER3 DNA MER1_type 1 209 0 351 304 124 16 chr5 200457362 200457684 -2627848 + L1MC4 LINE L1 7686 8042 0 2656 49 0 0 chr5 200457692 200457996 -2627536 + AluY SINE Alu 1 304 -7 2285 111 0 10 chr5 200458001 200458307 -2627225 + AluSg SINE Alu 1 303 -7 2295 92 3 16 chr5 200458307 200458622 -2626910 + AluY SINE Alu 1 311 0 2405 78 3 0 chr5 200459082 200459376 -2626156 - AluY SINE Alu -16 295 1 2590 66 3 0 chr5 200460374 200460676 -2624856 + AluSg SINE Alu 1 303 -7 2326 114 0 0 chr5 200460685 200460984 -2624548 + AluSx SINE Alu 1 299 -13 395 250 13 131 chr5 200461112 200461348 -2624184 - L1MC4 LINE L1 -16 8026 7819 2281 118 0 0 chr5 200461411 200461715 -2623817 + AluSg SINE Alu 1 304 -6 506 152 114 0 chr5 200461748 200461884 -2623648 - L1MA7 LINE L1 -1 6311 6155 894 136 9 3 chr5 200461993 200462213 -2623319 + AluJb SINE Alu 2 291 -21 27 49 0 0 chr5 200462225 200462266 -2623266 + AT_rich Low_complexity Low_complexity 1 41 0 400 256 0 0 chr5 200462268 200462346 -2623186 + MER2 DNA MER2_type 268 345 0 367 258 43 11 chr5 200462392 200462485 -2623047 + L1MC4 LINE L1 6608 6703 -1339 329 250 0 0 chr5 200462443 200462507 -2623025 - L1MC4 LINE L1 -1339 6703 6640 * 685 115 0 44 chr5 200462510 200462623 -2622909 - FLAM_C SINE Alu -7 136 29 438 288 46 56 chr5 200462630 200463043 -2622489 + L1M4 LINE L1 3829 4237 -1909 2119 131 3 13 chr5 200463052 200463364 -2622168 + AluSx SINE Alu 1 309 -3 2024 114 36 11 chr5 200463371 200463652 -2621880 + AluSx SINE Alu 1 288 -24 1188 126 68 14 chr5 200463670 200463892 -2621640 + L1MB1 LINE L1 5935 6168 0 1848 163 20 7 chr5 200463981 200464287 -2621245 + AluJb SINE Alu 1 310 -2 183 313 60 15 chr5 200465223 200465290 -2620242 + L2 LINE L2 2562 2631 -683 1209 105 0 0 chr5 200465290 200465443 -2620089 - AluSq SINE Alu -160 153 1 2529 62 0 13 chr5 200466860 200467164 -2618368 - AluY SINE Alu -9 302 3 230 262 28 19 chr5 200467193 200467300 -2618232 + L1MC4 LINE L1 7724 7831 -211 2536 123 65 97 chr5 200467307 200467567 -2617965 + L1MA9 LINE L1 5535 5802 -510 526 204 56 0 chr5 200467567 200467675 -2617857 + FLAM_A SINE Alu 3 116 -17 2536 123 65 97 chr5 200467675 200467724 -2617808 + L1MA9 LINE L1 5802 5851 -461 1804 161 34 0 chr5 200467724 200468016 -2617516 + AluJb SINE Alu 6 307 -5 2536 123 65 97 chr5 200468016 200468321 -2617211 + L1MA9 LINE L1 5851 6130 -182 2277 125 0 0 chr5 200468321 200468624 -2616908 + AluSx SINE Alu 1 303 -9 2351 110 0 0 chr5 200468629 200468937 -2616595 + AluSx SINE Alu 1 308 -4 242 146 0 21 chr5 200468943 200468991 -2616541 + L1MA8 LINE L1 6115 6161 -130 2283 63 0 0 chr5 200469094 200469363 -2616169 - AluSx SINE Alu -43 269 1 351 258 111 41 chr5 200469380 200469720 -2615812 - L1 LINE L1 -2373 3773 3400 3761 117 70 81 chr5 200469750 200470526 -2615006 - LTR1 LTR ERV1 0 785 19 828 180 12 0 chr5 200470641 200470808 -2614724 - L1MB7 LINE L1 -11 6173 6005 2322 84 0 7 chr5 200470833 200471129 -2614403 - AluSc SINE Alu -15 294 1 1476 168 0 96 chr5 200471206 200471540 -2613992 + AluJo SINE Alu 1 302 0 353 212 71 53 chr5 200471567 200471793 -2613739 - L1MC4a LINE L1 -1736 6072 5843 1634 244 48 21 chr5 200471808 200471986 -2613546 - L1MC4a LINE L1 -2025 5783 5611 2608 62 0 0 chr5 200471986 200472294 -2613238 - AluY SINE Alu -3 308 1 1634 244 48 21 chr5 200472294 200472594 -2612938 - L1MC4a LINE L1 -2197 5611 5292 1370 231 127 17 chr5 200472613 200473076 -2612456 - MLT1H1 LTR MaLR -8 547 34 1655 152 4 30 chr5 200474034 200474169 -2611363 - AluJo SINE Alu -46 266 140 2284 94 0 7 chr5 200474169 200474466 -2611066 - AluSg SINE Alu -15 295 1 1655 152 4 30 chr5 200474466 200474599 -2610933 - AluJo SINE Alu -172 140 5 703 187 19 13 chr5 200475149 200475304 -2610228 - L1MD3 LINE L1 -8 7987 7832 2140 108 0 3 chr5 200475312 200475617 -2609915 - AluSx SINE Alu -8 304 1 564 249 65 24 chr5 200475622 200475791 -2609741 - L1MD2 LINE L1 -232 6127 5952 1012 235 48 30 chr5 200475792 200476128 -2609404 + MLT1C LTR MaLR 4 345 -122 358 286 62 0 chr5 200476216 200476328 -2609204 - L2 LINE L2 -7 3306 3188 515 211 8 16 chr5 200476332 200476460 -2609072 - L1MDa LINE L1 -5066 1474 1348 354 255 104 37 chr5 200476814 200477141 -2608391 - LTR33A LTR ERVL 0 523 71 498 317 50 47 chr5 200477267 200477718 -2607814 + L1MC/D LINE L1 4981 5441 -743 2387 81 0 0 chr5 200477719 200478028 -2607504 + AluY SINE Alu 3 311 0 833 255 74 63 chr5 200478167 200478547 -2606985 + MLT1J LTR MaLR 69 452 -59 1867 168 41 0 chr5 200478616 200478979 -2606553 + MLT1B LTR MaLR 1 378 -12 2503 48 0 6 chr5 200481469 200481782 -2603750 - AluY SINE Alu 0 311 1 1527 211 40 3 chr5 200482723 200483045 -2602487 - MLT1A1 LTR MaLR -31 334 1 286 325 97 30 chr5 200483187 200483424 -2602108 - L1MC4a LINE L1 -1745 6063 5811 352 253 21 11 chr5 200483434 200483529 -2602003 - LTR33 LTR ERVL -1 520 425 351 270 88 0 chr5 200483629 200483766 -2601766 - LTR33 LTR ERVL -362 159 11 484 320 157 9 chr5 200483873 200484749 -2600783 - L1MC4a LINE L1 -748 5398 4669 2074 175 27 47 chr5 200485078 200485416 -2600116 - MER57A LTR ERV1 -2 401 71 2017 114 0 46 chr5 200485416 200485576 -2599956 - AluSq SINE Alu -20 293 152 2347 68 0 0 chr5 200485576 200485872 -2599660 - AluY SINE Alu -15 296 1 2017 114 0 46 chr5 200485872 200486018 -2599514 - AluSq SINE Alu -161 152 1 2074 175 27 47 chr5 200486018 200486085 -2599447 - MER57A LTR ERV1 -332 71 4 378 353 83 21 chr5 200488483 200488857 -2596675 + L1ME4a LINE L1 5379 5775 -346 334 303 0 25 chr5 200488864 200488986 -2596546 + L1ME4a LINE L1 5809 5927 -194 441 0 0 0 chr5 200489478 200489527 -2596005 + (TA)n Simple_repeat Simple_repeat 1 49 0 2178 103 3 3 chr5 200489527 200489827 -2595705 - AluSx SINE Alu -12 300 1 2081 109 0 16 chr5 200490997 200491167 -2594365 - AluSx SINE Alu -9 303 139 2149 89 0 0 chr5 200491167 200491449 -2594083 - AluY SINE Alu -13 298 17 2081 109 0 16 chr5 200491449 200491581 -2593951 - AluSx SINE Alu -173 139 6 232 239 110 73 chr5 200491585 200491694 -2593838 + L1ME4a LINE L1 5951 6063 -58 511 277 44 120 chr5 200494082 200494465 -2591067 - MLT1K LTR MaLR -65 523 170 201 288 75 0 chr5 200495773 200495853 -2589679 - L2 LINE L2 -49 3223 3138 1339 254 56 23 chr5 200499760 200500267 -2585265 + MER74B LTR ERVL 59 622 0 1377 311 82 23 chr5 200500269 200500590 -2584942 - L1ME2 LINE L1 -143 6021 5720 2720 141 76 0 chr5 200500590 200501052 -2584480 + LOR1a LTR ERV1 1 497 0 1377 311 82 23 chr5 200501052 200501425 -2584107 - L1ME2 LINE L1 -444 5720 5286 502 294 61 27 chr5 200501905 200501936 -2583596 - L2 LINE L2 -213 3100 3072 315 0 0 0 chr5 200501936 200501971 -2583561 + (TG)n Simple_repeat Simple_repeat 1 35 0 502 294 61 27 chr5 200501971 200502201 -2583331 - L2 LINE L2 -241 3072 2830 325 303 18 28 chr5 200502202 200502311 -2583221 + MIR SINE MIR 84 191 -71 797 261 48 42 chr5 200502464 200502557 -2582975 + MER102b DNA MER1_type 1 92 -1336 2362 66 0 7 chr5 200502557 200502859 -2582673 + AluY SINE Alu 1 300 -11 797 261 48 42 chr5 200502859 200503095 -2582437 + MER102b DNA MER1_type 92 332 -9 3127 206 35 75 chr5 200503250 200503503 -2582029 + Charlie1a DNA MER1_type 16 278 -2483 1284 243 13 0 chr5 200503503 200503803 -2581729 - AluJo SINE Alu -7 305 2 3127 206 35 75 chr5 200503803 200504404 -2581128 + Charlie1a DNA MER1_type 278 836 -619 405 192 14 0 chr5 200504424 200504497 -2581035 + LTR40c LTR ERVL 13 86 -379 1058 155 0 0 chr5 200504509 200504677 -2580855 - AluY SINE Alu -10 301 134 195 42 0 0 chr5 200504677 200504701 -2580831 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1887 117 29 0 chr5 200504701 200504975 -2580557 - AluSx SINE Alu -30 282 1 1776 206 5 24 chr5 200504985 200505359 -2580173 + LTR40c LTR ERVL 97 463 -2 461 200 19 0 chr5 200505376 200505481 -2580051 + Charlie1a DNA MER1_type 841 947 -508 431 176 44 0 chr5 200505514 200505605 -2579927 + MER96 DNA MER1_type? 79 173 -2 1209 199 7 105 chr5 200505607 200505709 -2579823 + Charlie1a DNA MER1_type 945 1055 -1706 2483 61 0 6 chr5 200505709 200506022 -2579510 - AluY SINE Alu 0 311 1 1209 199 7 105 chr5 200506022 200506367 -2579165 + Charlie1a DNA MER1_type 1055 1348 -107 2110 125 0 0 chr5 200506391 200506688 -2578844 + AluSx SINE Alu 1 297 -15 351 297 11 22 chr5 200506689 200506780 -2578752 + L1MC4 LINE L1 6614 6703 -1339 180 254 0 0 chr5 200507132 200507191 -2578341 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 349 231 11 19 chr5 200507245 200507515 -2578017 + (TCCA)n Simple_repeat Simple_repeat 1 267 0 506 149 0 9 chr5 200507574 200507681 -2577851 + (TCCA)n Simple_repeat Simple_repeat 4 109 0 367 238 7 7 chr5 200507768 200507915 -2577617 + (TCCA)n Simple_repeat Simple_repeat 3 149 0 284 198 0 12 chr5 200507945 200508026 -2577506 + (TCCA)n Simple_repeat Simple_repeat 3 82 0 2306 79 0 3 chr5 200508131 200508435 -2577097 + AluY SINE Alu 1 303 -8 867 201 8 122 chr5 200508732 200508835 -2576697 - AluJo SINE Alu -87 225 167 2334 80 0 0 chr5 200508835 200509146 -2576386 - AluY SINE Alu 0 311 1 867 201 8 122 chr5 200509146 200509296 -2576236 - AluJo SINE Alu -145 167 1 1886 165 117 3 chr5 200509759 200510135 -2575397 + MSTA LTR MaLR 1 419 -9 382 362 12 6 chr5 200513240 200513403 -2572129 - MIR SINE MIR -36 226 63 616 224 0 0 chr5 200514090 200514206 -2571326 + MSTC LTR MaLR 3 118 -310 1937 248 73 16 chr5 200514617 200515162 -2570370 - L1MB7 LINE L1 -17 6167 5592 2480 55 0 3 chr5 200515360 200515670 -2569862 + AluY SINE Alu 1 309 -2 259 295 0 0 chr5 200515672 200515750 -2569782 + L1M4 LINE L1 3971 4048 -2098 234 318 49 52 chr5 200515904 200516144 -2569388 + L1M4 LINE L1 4280 4520 -1626 2337 70 3 7 chr5 200516144 200516445 -2569087 + AluSg1 SINE Alu 1 300 -9 234 318 49 52 chr5 200516445 200516531 -2569001 + L1M4 LINE L1 4520 4605 -1541 2165 84 10 3 chr5 200516539 200516835 -2568697 + AluY SINE Alu 1 298 -13 1604 115 16 12 chr5 200517064 200517308 -2568224 - AluSx SINE Alu -67 245 1 680 189 34 11 chr5 200517310 200517485 -2568047 - L1MDa LINE L1 -5254 1286 1108 971 189 11 11 chr5 200517485 200517695 -2567837 + AluJb SINE Alu 98 307 0 976 255 33 60 chr5 200517695 200517855 -2567677 - LTR37A LTR ERV1 -54 372 209 1975 186 155 25 chr5 200517855 200518009 -2567523 - MLT1D LTR MaLR 0 505 372 2373 66 0 10 chr5 200518009 200518314 -2567218 + AluY SINE Alu 1 302 -9 1975 186 155 25 chr5 200518314 200518605 -2566927 - MLT1D LTR MaLR -133 372 2 976 255 33 60 chr5 200518605 200518809 -2566723 - LTR37A LTR ERV1 -217 209 18 317 340 49 46 chr5 200518876 200519161 -2566371 - HAL1 LINE L1 -1182 1325 1040 291 54 0 0 chr5 200519373 200519410 -2566122 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 785 126 36 0 chr5 200519410 200519521 -2566011 - FLAM_C SINE Alu -27 116 2 244 279 19 39 chr5 200519533 200519637 -2565895 - MER77 LTR ERV1 -424 181 80 388 158 0 0 chr5 200521014 200521071 -2564461 + FRAM SINE Alu 75 131 -35 208 143 0 0 chr5 200521085 200521120 -2564412 + (T)n Simple_repeat Simple_repeat 1 35 0 2316 74 0 3 chr5 200521131 200521430 -2564102 + AluY SINE Alu 1 298 -13 1236 167 25 0 chr5 200521450 200521654 -2563878 - AluJb SINE Alu -103 209 1 338 164 0 0 chr5 200521656 200521711 -2563821 + MLT2C1 LTR ERVL 4 58 -339 1142 259 24 12 chr5 200521711 200522047 -2563485 - MER93a LTR ERV1 0 402 63 1075 210 33 57 chr5 200522146 200522504 -2563028 + MLT2C1 LTR ERVL 60 414 0 233 342 47 0 chr5 200522590 200522762 -2562770 + L2 LINE L2 2398 2583 -731 2357 74 0 0 chr5 200523311 200523622 -2561910 - AluY SINE Alu 0 311 1 2189 75 4 0 chr5 200525583 200525861 -2559671 + AluSx SINE Alu 1 279 -33 2312 66 7 0 chr5 200525875 200526163 -2559369 + AluY SINE Alu 1 290 -21 260 286 161 9 chr5 200526388 200526500 -2559032 + L2 LINE L2 3182 3310 -3 2221 75 0 14 chr5 200527350 200527643 -2557889 + AluY SINE Alu 1 289 -22 1686 126 28 0 chr5 200527658 200527913 -2557619 + AluSx SINE Alu 41 302 -10 614 344 15 7 chr5 200527927 200528197 -2557335 + HAL1 LINE L1 1387 1658 -849 2337 68 0 0 chr5 200528553 200528845 -2556687 - AluY SINE Alu -8 303 12 460 173 53 98 chr5 200529085 200529237 -2556295 + MLT1I LTR MaLR 257 548 -1 656 223 8 0 chr5 200529335 200529465 -2556067 + FLAM_C SINE Alu 6 136 -7 545 245 70 69 chr5 200529466 200529530 -2556002 + L1ME2 LINE L1 5864 5926 -236 2076 110 7 10 chr5 200529530 200529830 -2555702 + AluSq SINE Alu 1 299 -14 545 245 70 69 chr5 200529830 200530039 -2555493 + L1ME2 LINE L1 5926 6152 -10 555 56 0 0 chr5 200530039 200530110 -2555422 - U4 snRNA snRNA -74 71 1 1171 181 96 107 chr5 200531558 200531711 -2553821 - Charlie1b DNA MER1_type -2239 522 369 330 128 103 0 chr5 200531711 200531789 -2553743 + L1MA7 LINE L1 6204 6289 -2 1171 181 96 107 chr5 200531789 200532094 -2553438 - Charlie1b DNA MER1_type -2392 369 69 501 82 0 184 chr5 200532242 200532275 -2553257 - MADE1 DNA Mariner 0 80 43 2208 96 0 0 chr5 200532275 200532566 -2552966 + AluSx SINE Alu 3 293 -19 501 82 0 184 chr5 200532566 200532630 -2552902 - MADE1 DNA Mariner -37 43 1 371 269 41 18 chr5 200532683 200532854 -2552678 + (TG)n Simple_repeat Simple_repeat 2 176 0 345 208 44 60 chr5 200532943 200533126 -2552406 + (TG)n Simple_repeat Simple_repeat 1 180 0 202 295 184 53 chr5 200533229 200533419 -2552113 - MIR SINE MIR -10 252 38 197 309 18 0 chr5 200533747 200533802 -2551730 - L2 LINE L2 -7 3306 3251 586 231 44 12 chr5 200535061 200535221 -2550311 - MER5A DNA MER1_type -24 165 1 23 0 0 0 chr5 200535412 200535435 -2550097 + AT_rich Low_complexity Low_complexity 1 23 0 1426 214 0 0 chr5 200535435 200535715 -2549817 - AluJo SINE Alu 0 312 33 1938 152 0 0 chr5 200536821 200537123 -2548409 + AluSx SINE Alu 1 302 -10 2320 78 10 0 chr5 200537382 200537689 -2547843 + AluY SINE Alu 1 310 -1 2145 104 7 0 chr5 200537737 200538036 -2547496 + AluSg SINE Alu 1 301 -9 1275 264 56 23 chr5 200538159 200538666 -2546866 + MER74B LTR ERVL 59 622 0 1458 307 83 20 chr5 200538668 200538989 -2546543 - L1ME2 LINE L1 -143 6021 5721 2745 138 76 0 chr5 200538989 200539451 -2546081 + LOR1a LTR ERV1 1 497 0 1458 307 83 20 chr5 200539451 200539819 -2545713 - L1ME2 LINE L1 -443 5721 5289 485 298 61 27 chr5 200540304 200540335 -2545197 - L2 LINE L2 -213 3100 3072 279 0 0 0 chr5 200540335 200540366 -2545166 + (TG)n Simple_repeat Simple_repeat 1 31 0 485 298 61 27 chr5 200540366 200540596 -2544936 - L2 LINE L2 -241 3072 2830 349 284 18 28 chr5 200540597 200540706 -2544826 + MIR SINE MIR 84 191 -71 797 261 48 42 chr5 200540859 200540952 -2544580 + MER102b DNA MER1_type 1 92 -1336 2346 63 0 3 chr5 200540952 200541253 -2544279 + AluY SINE Alu 1 300 -11 797 261 48 42 chr5 200541253 200541489 -2544043 + MER102b DNA MER1_type 92 332 -9 636 262 98 27 chr5 200541644 200541869 -2543663 + Charlie1a DNA MER1_type 16 256 -1199 2065 80 0 0 chr5 200541875 200542139 -2543393 + AluSx SINE Alu 38 301 -11 987 169 8 72 chr5 200542164 200542271 -2543261 + Charlie1a DNA MER1_type 733 818 -1943 2180 216 8 38 chr5 200542271 200542748 -2542784 + LTR40c LTR ERVL 2 464 -1 987 169 8 72 chr5 200542748 200542876 -2542656 + Charlie1a DNA MER1_type 818 953 -502 282 231 55 11 chr5 200542903 200542994 -2542538 + MER96 DNA MER1_type? 79 173 -2 2063 201 13 60 chr5 200542996 200543532 -2542000 + Charlie1a DNA MER1_type 945 1455 0 913 257 90 24 chr5 200543532 200544000 -2541532 - MER115 DNA AcHobo -65 628 44 310 216 113 10 chr5 200544415 200544473 -2541059 - L1MC4 LINE L1 -1314 7008 6957 2106 102 0 10 chr5 200544473 200544767 -2540765 + AluSg1 SINE Alu 1 291 -18 310 216 113 10 chr5 200544767 200544805 -2540727 - L1MC4 LINE L1 -1365 6957 1995 294 180 0 0 chr5 200544914 200544975 -2540557 + GA-rich Low_complexity Low_complexity 1 61 0 1764 155 0 26 chr5 200545011 200545321 -2540211 - AluJb SINE Alu -4 308 7 584 183 124 13 chr5 200545324 200545477 -2540055 - MLT1B LTR MaLR -216 174 5 538 172 26 9 chr5 200545872 200545988 -2539544 + MSTB1 LTR MaLR 1 118 -314 901 108 23 0 chr5 200545997 200546127 -2539405 + AluSp SINE Alu 1 133 -180 985 189 57 12 chr5 200546231 200546484 -2539048 + MSTB1 LTR MaLR 154 419 -11 279 239 55 90 chr5 200546709 200546910 -2538622 - L1MC/D LINE L1 -2037 5771 5578 327 311 67 0 chr5 200547421 200547556 -2537976 + MIR3 SINE MIR 54 197 -11 208 271 21 0 chr5 200549846 200549894 -2535638 + L2 LINE L2 3208 3256 -16 1736 206 60 0 chr5 200551410 200551778 -2533754 - MLT1B LTR MaLR 0 390 1 516 232 71 26 chr5 200551785 200551940 -2533592 - MIR SINE MIR -21 241 80 302 316 34 27 chr5 200553205 200553358 -2532174 + MIR SINE MIR 2 154 -63 1896 210 81 5 chr5 200555350 200555746 -2529786 - MSTB LTR MaLR 0 426 1 278 216 5 152 chr5 200556119 200556323 -2529209 + G-rich Low_complexity Low_complexity 4 177 0 247 301 0 44 chr5 200556355 200556468 -2529064 + G-rich Low_complexity Low_complexity 6 113 0 2083 87 0 55 chr5 200556566 200556713 -2528819 + AluSx SINE Alu 1 124 -188 2319 69 0 10 chr5 200556713 200557016 -2528516 + AluY SINE Alu 1 300 -11 2083 87 0 55 chr5 200557016 200557179 -2528353 + AluSx SINE Alu 124 294 -18 219 371 6 28 chr5 200558711 200558889 -2526643 + L2 LINE L2 2631 2804 -510 616 292 14 27 chr5 200559807 200560026 -2525506 + MLT1K LTR MaLR 350 565 -23 2134 122 0 3 chr5 200561501 200561813 -2523719 - AluSx SINE Alu -1 311 1 196 305 76 38 chr5 200562020 200562151 -2523381 + MIR SINE MIR 16 151 -111 330 337 34 44 chr5 200562492 200562697 -2522835 - L1 LINE L1 -1127 5019 4817 509 369 71 27 chr5 200563184 200563608 -2521924 - L1ME LINE L1 -536 5634 5230 2405 60 0 3 chr5 200563608 200563909 -2521623 - AluY SINE Alu -11 300 1 509 369 71 27 chr5 200563909 200564390 -2521142 - L1ME LINE L1 -940 5230 4771 1609 123 30 181 chr5 200564390 200564458 -2521074 - MLT1A1 LTR MaLR 0 365 288 1689 158 9 58 chr5 200564458 200564786 -2520746 - AluJb SINE Alu 0 312 1 1609 123 30 181 chr5 200564786 200564855 -2520677 - MLT1A1 LTR MaLR -77 288 210 219 88 0 0 chr5 200564855 200564889 -2520643 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2056 105 4 0 chr5 200564891 200565168 -2520364 - AluSx SINE Alu -34 278 1 1609 123 30 181 chr5 200565168 200565456 -2520076 - MLT1A1 LTR MaLR -156 209 1 509 369 71 27 chr5 200565456 200565569 -2519963 - L1ME LINE L1 -1399 4771 4565 2362 63 3 0 chr5 200565628 200565929 -2519603 - AluY SINE Alu -9 302 1 304 299 68 43 chr5 200566837 200566954 -2518578 - L1ME LINE L1 -2146 4000 3881 1773 97 0 4 chr5 200566974 200567211 -2518321 + AluSq SINE Alu 1 236 -77 230 217 26 157 chr5 200568050 200568165 -2517367 + MER102b DNA MER1_type 240 339 -2 2232 83 0 10 chr5 200568998 200569299 -2516233 + AluY SINE Alu 1 298 -13 240 35 0 0 chr5 200569325 200569354 -2516178 + (CA)n Simple_repeat Simple_repeat 1 29 0 367 316 78 39 chr5 200569363 200569698 -2515834 + L1ME2 LINE L1 36 383 -6013 902 176 24 12 chr5 200569968 200570138 -2515394 + MER20 DNA MER1_type 45 216 -3 361 259 12 0 chr5 200570178 200570263 -2515269 + MLT1F1 LTR MaLR 3 88 -454 * 1267 243 33 3 chr5 200570252 200570556 -2514976 + MLT1F1 LTR MaLR 255 567 0 3727 258 53 34 chr5 200570563 200571806 -2513726 + L1ME2 LINE L1 660 1878 -4337 189 0 0 0 chr5 200571806 200571827 -2513705 + (TA)n Simple_repeat Simple_repeat 2 22 0 3727 258 53 34 chr5 200571827 200573274 -2512258 + L1ME2 LINE L1 1878 3352 -2863 362 117 0 0 chr5 200573274 200573334 -2512198 - L1MA8 LINE L1 -13 6278 6219 3727 258 53 34 chr5 200573334 200573522 -2512010 + L1ME2 LINE L1 3352 3535 -2680 560 270 218 17 chr5 200573534 200573823 -2511709 - MLT1H1 LTR MaLR -12 543 197 906 216 45 8 chr5 200573830 200574075 -2511457 + L1ME2 LINE L1 4708 4961 -1254 976 229 82 66 chr5 200574076 200574381 -2511151 - MLT1E1 LTR MaLR 0 654 345 358 176 0 0 chr5 200574416 200574484 -2511048 - MLT1E1 LTR MaLR -418 236 169 729 206 65 30 chr5 200574488 200574687 -2510845 - MLT1D LTR MaLR -187 318 113 2185 161 88 17 chr5 200574698 200575120 -2510412 + MER66A LTR ERV1 27 478 0 374 184 20 49 chr5 200575120 200575240 -2510292 - MLT1D LTR MaLR -455 50 4 406 232 93 99 chr5 200575269 200575380 -2510152 + L1ME2 LINE L1 4953 5064 -1151 2223 108 0 26 chr5 200575380 200575686 -2509846 + AluY SINE Alu 1 298 -13 406 232 93 99 chr5 200575686 200575725 -2509807 + L1ME2 LINE L1 5064 5102 -1113 3590 157 38 62 chr5 200575743 200576578 -2508954 + L1MB7 LINE L1 5354 6168 -16 753 165 161 18 chr5 200576593 200576811 -2508721 + Cheshire DNA MER1_type 2012 2260 -160 2877 227 53 14 chr5 200576828 200577855 -2507677 + L1ME2 LINE L1 5085 6160 -73 477 0 0 0 chr5 200577859 200577912 -2507620 + (TA)n Simple_repeat Simple_repeat 2 54 0 2549 81 3 3 chr5 200577912 200578258 -2507274 + THE1A LTR MaLR 7 352 -3 297 0 0 0 chr5 200578272 200578305 -2507227 + (TG)n Simple_repeat Simple_repeat 2 34 0 312 213 0 13 chr5 200578305 200578380 -2507152 + L1ME3 LINE L1 6082 6155 -7 2248 91 0 42 chr5 200578405 200578713 -2506819 + AluY SINE Alu 1 295 -16 2295 86 31 0 chr5 200578713 200579004 -2506528 + AluY SINE Alu 1 300 -11 208 164 49 0 chr5 200579201 200579262 -2506270 + GA-rich Low_complexity Low_complexity 2 65 0 2593 107 13 11 chr5 200579487 200579861 -2505671 + THE1C LTR MaLR 1 375 0 10784 113 13 31 chr5 200579861 200581470 -2504062 + THE1C-int LTR MaLR 1 1580 0 2399 115 24 19 chr5 200581470 200581843 -2503689 + THE1C LTR MaLR 1 375 0 641 241 105 51 chr5 200581868 200582221 -2503311 + MLT1J2 LTR MaLR 45 416 -34 1694 246 92 37 chr5 200582353 200582455 -2503077 + L1MD2 LINE L1 5285 5380 -979 2418 62 31 0 chr5 200582455 200582745 -2502787 + AluY SINE Alu 1 299 -12 1694 246 92 37 chr5 200582745 200583618 -2501914 + L1MD2 LINE L1 5380 6347 -12 351 267 105 33 chr5 200583921 200584162 -2501370 - L2 LINE L2 -24 3248 2454 288 270 108 27 chr5 200588168 200588279 -2497253 - MIR SINE MIR -35 227 108 183 286 76 38 chr5 200589114 200589219 -2496313 - L2 LINE L2 -220 3052 2944 414 0 0 0 chr5 200589722 200589768 -2495764 + (CA)n Simple_repeat Simple_repeat 2 47 0 2717 37 0 0 chr5 200589859 200590157 -2495375 + AluY SINE Alu 1 298 -13 258 241 57 57 chr5 200591475 200591616 -2493916 + MIR3 SINE MIR 11 151 -57 214 372 0 0 chr5 200592176 200592305 -2493227 + C-rich Low_complexity Low_complexity 1 129 0 2511 91 0 0 chr5 200595356 200595665 -2489867 - AluSx SINE Alu -3 309 1 189 238 82 74 chr5 200596166 200596288 -2489244 - L3 LINE CR1 -857 720 598 1601 145 40 47 chr5 200596745 200597042 -2488490 - AluJb SINE Alu -17 295 1 283 315 103 7 chr5 200598100 200598246 -2487286 + MIR SINE MIR 65 224 -38 1046 98 0 0 chr5 200598559 200598691 -2486841 - AluY SINE Alu -179 132 1 2373 105 0 6 chr5 200598900 200599215 -2486317 + AluSq SINE Alu 1 313 0 2107 107 3 7 chr5 200599283 200599582 -2485950 + AluY SINE Alu 1 298 -13 2573 67 0 10 chr5 200599976 200600290 -2485242 + AluY SINE Alu 1 311 0 189 0 0 0 chr5 200601213 200601234 -2484298 + (ATG)n Simple_repeat Simple_repeat 2 22 0 756 147 5 27 chr5 200601250 200601434 -2484098 + CT-rich Low_complexity Low_complexity 1 180 0 1895 137 10 20 chr5 200601457 200601612 -2483920 - AluJb SINE Alu -23 289 137 2304 114 0 7 chr5 200601612 200601918 -2483614 - AluSq SINE Alu -9 304 1 1895 137 10 20 chr5 200601918 200602054 -2483478 - AluJb SINE Alu -175 137 1 1530 202 64 23 chr5 200602054 200602425 -2483107 - L1M3 LINE L1 -441 5742 5388 2530 72 0 0 chr5 200602425 200602731 -2482801 - AluY SINE Alu -5 306 1 2490 88 3 0 chr5 200602732 200603038 -2482494 - AluSx SINE Alu -5 307 1 1530 202 64 23 chr5 200603038 200603087 -2482445 - L1M3 LINE L1 -794 5389 5281 2122 249 110 19 chr5 200603087 200603823 -2481709 - L1ME3A LINE L1 -8 6162 5360 217 128 43 0 chr5 200603839 200603886 -2481646 + CT-rich Low_complexity Low_complexity 1 49 0 394 315 136 48 chr5 200603897 200603940 -2481592 - L1ME3A LINE L1 -804 5342 5304 918 77 7 49 chr5 200603940 200604083 -2481449 - L1PA8 LINE L1 0 6172 6036 394 315 136 48 chr5 200604083 200604160 -2481372 - L1ME3A LINE L1 -842 5304 5235 1908 139 10 0 chr5 200604160 200604448 -2481084 - AluJb SINE Alu -21 291 1 394 315 136 48 chr5 200604448 200604508 -2481024 - L1ME3A LINE L1 -911 5235 5182 8532 55 1 0 chr5 200604508 200605476 -2480056 - LTR5 LTR ERVK 0 969 1 394 315 136 48 chr5 200605476 200605544 -2479988 - L1ME3A LINE L1 -964 5182 5070 266 270 92 70 chr5 200606365 200606550 -2478982 + L1ME1 LINE L1 5920 6108 -58 2369 78 3 3 chr5 200606554 200606849 -2478683 - AluSq SINE Alu -18 295 1 720 189 8 8 chr5 200608044 200608176 -2477356 + FLAM_C SINE Alu 2 133 -10 234 0 0 0 chr5 200608267 200608293 -2477239 + (T)n Simple_repeat Simple_repeat 1 26 0 403 295 30 4 chr5 200609509 200609671 -2475861 + MIR SINE MIR 2 167 -62 1845 108 0 0 chr5 200609766 200610007 -2475525 - AluSq SINE Alu -72 241 1 546 244 179 0 chr5 200610469 200610715 -2474817 + L1M4b LINE L1 1244 1533 -5326 1280 92 0 3 chr5 200610717 200610948 -2474584 + AluSp SINE Alu 2 305 -8 824 246 86 101 chr5 200610949 200611266 -2474266 + L1M4b LINE L1 1798 2118 -4841 2051 121 3 27 chr5 200611266 200611393 -2474139 + AluSx SINE Alu 10 138 -174 2395 98 0 0 chr5 200611393 200611700 -2473832 + AluY SINE Alu 1 307 -4 2051 121 3 27 chr5 200611700 200611869 -2473663 + AluSx SINE Alu 138 299 -13 824 246 86 101 chr5 200611869 200611890 -2473642 + L1M4b LINE L1 2118 2138 -4821 1379 29 12 0 chr5 200611890 200612061 -2473471 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 824 246 86 101 chr5 200612061 200612265 -2473267 + L1M4b LINE L1 2138 2333 -4626 282 116 0 0 chr5 200612308 200612351 -2473181 + (TG)n Simple_repeat Simple_repeat 1 43 0 3169 222 60 31 chr5 200613007 200614103 -2471429 - L1ME LINE L1 -4512 1568 474 532 177 0 53 chr5 200614300 200614413 -2471119 + L1 LINE L1 4087 4193 -1953 796 215 6 6 chr5 200614424 200614596 -2470936 + L1MB8 LINE L1 5995 6166 -12 217 273 91 23 chr5 200615121 200615209 -2470323 + MIR SINE MIR 3 96 -166 321 307 61 0 chr5 200615446 200615560 -2469972 + L1 LINE L1 4884 5004 -1142 203 306 75 45 chr5 200615915 200616049 -2469483 - MIR SINE MIR -111 151 14 1785 159 0 3 chr5 200616253 200616536 -2468996 + AluSx SINE Alu 1 282 -30 195 69 0 0 chr5 200616540 200616569 -2468963 + (TA)n Simple_repeat Simple_repeat 1 29 0 386 204 134 14 chr5 200616831 200616973 -2468559 + L1MB7 LINE L1 6026 6184 0 2183 130 0 0 chr5 200616983 200617283 -2468249 + AluSx SINE Alu 1 300 -12 463 259 58 0 chr5 200617284 200617423 -2468109 - MER113 DNA MER1_type? -83 438 292 242 105 0 0 chr5 200617638 200617676 -2467856 + L1MB7 LINE L1 6013 6050 -134 224 300 14 0 chr5 200617700 200617770 -2467762 - MIR3 SINE MIR -43 165 95 325 294 184 15 chr5 200618471 200618607 -2466925 + MIR SINE MIR 49 207 -55 390 272 22 0 chr5 200618620 200618712 -2466820 - MIR SINE MIR -108 154 61 784 180 57 16 chr5 200619382 200619576 -2465956 + AluSc SINE Alu 1 202 -107 1776 162 0 3 chr5 200619783 200620091 -2465441 + AluY SINE Alu 3 309 -2 302 301 12 24 chr5 200620100 200620183 -2465349 + L1M4c LINE L1 2325 2406 -4240 1774 284 52 67 chr5 200620224 200621135 -2464397 + L1M4c LINE L1 14 910 -5632 978 256 26 0 chr5 200622728 200622994 -2462538 + MLT1A1 LTR MaLR 85 357 -8 300 404 58 5 chr5 200623229 200623437 -2462095 + L1M4c LINE L1 3291 3509 -3135 1610 217 34 55 chr5 200623611 200623658 -2461874 - MLT1D LTR MaLR -21 484 438 2081 93 0 0 chr5 200623658 200623937 -2461595 + AluY SINE Alu 3 281 -30 279 0 0 0 chr5 200623939 200623970 -2461562 + (CA)n Simple_repeat Simple_repeat 2 32 0 1610 217 34 55 chr5 200623970 200624235 -2461297 - MLT1D LTR MaLR -68 437 180 2323 68 0 3 chr5 200624235 200624528 -2461004 + AluY SINE Alu 15 306 -5 1610 217 34 55 chr5 200624528 200624705 -2460827 - MLT1D LTR MaLR -325 180 1 194 306 67 52 chr5 200624965 200625099 -2460433 + L2 LINE L2 3137 3272 0 192 288 110 41 chr5 200628389 200628535 -2456997 - L2 LINE L2 -49 3223 3068 188 344 26 84 chr5 200628674 200628828 -2456704 - L2 LINE L2 -42 3230 3086 243 88 0 0 chr5 200629522 200629556 -2455976 + (A)n Simple_repeat Simple_repeat 1 34 0 750 286 74 9 chr5 200629909 200630140 -2455392 - MIR SINE MIR -10 252 7 190 379 26 52 chr5 200630098 200630251 -2455281 + MIR SINE MIR 7 155 -107 * 2303 52 0 49 chr5 200631005 200631330 -2454202 + AluY SINE Alu 3 311 0 1234 211 84 68 chr5 200631928 200632369 -2453163 + MLT1D LTR MaLR 58 505 0 249 218 0 103 chr5 200632950 200633037 -2452495 + MLT1H LTR MaLR 465 536 -13 1734 188 0 25 chr5 200633399 200633713 -2451819 - AluJo SINE Alu -6 306 1 2261 72 0 26 chr5 200634016 200634321 -2451211 - AluY SINE Alu -14 297 1 885 162 3 17 chr5 200634918 200635205 -2450327 + CT-rich Low_complexity Low_complexity 1 283 0 796 216 65 0 chr5 200635239 200635424 -2450108 + MLT1B LTR MaLR 192 388 -2 839 284 93 23 chr5 200635558 200635988 -2449544 + MLT1K LTR MaLR 104 563 -25 2314 56 0 46 chr5 200636181 200636505 -2449027 + AluY SINE Alu 3 311 0 1234 211 84 68 chr5 200637105 200637546 -2447986 + MLT1D LTR MaLR 58 505 0 249 218 0 103 chr5 200638127 200638214 -2447318 + MLT1H LTR MaLR 465 536 -13 1734 188 0 25 chr5 200638576 200638890 -2446642 - AluJo SINE Alu -6 306 1 2256 76 0 23 chr5 200639193 200639497 -2446035 - AluY SINE Alu -14 297 1 696 182 115 0 chr5 200640088 200640253 -2445279 - MSTD LTR MaLR 0 396 213 570 124 0 21 chr5 200640265 200640362 -2445170 - MSTD LTR MaLR -301 95 1 1464 215 38 83 chr5 200640442 200640654 -2444878 - MLT1C LTR MaLR -10 457 237 1161 219 56 107 chr5 200640654 200641064 -2444468 - MLT1B LTR MaLR 0 390 2 1464 215 38 83 chr5 200641064 200641330 -2444202 - MLT1C LTR MaLR -230 237 1 424 248 75 47 chr5 200641330 200641544 -2443988 + MLT1H LTR MaLR 37 256 -293 431 279 20 54 chr5 200641769 200641973 -2443559 - Charlie8 DNA MER1_type -2217 200 4 25 31 0 0 chr5 200642555 200642587 -2442945 + AT_rich Low_complexity Low_complexity 1 32 0 268 294 33 52 chr5 200645543 200645696 -2439836 - Charlie8 DNA MER1_type -2209 208 59 2349 58 0 29 chr5 200646264 200646572 -2438960 - AluY SINE Alu -12 299 1 519 296 114 0 chr5 200646575 200646795 -2438737 + L2 LINE L2 2726 2970 -344 250 236 0 0 chr5 200646951 200647006 -2438526 - L2 LINE L2 -1 3312 3258 1542 196 25 0 chr5 200647318 200647598 -2437934 + AluJb SINE Alu 3 289 -23 411 199 130 15 chr5 200647602 200647733 -2437799 - MIR SINE MIR -71 191 46 248 273 141 0 chr5 200649756 200649855 -2435677 + MLT1L LTR MaLR 503 615 0 212 125 21 21 chr5 200651465 200651513 -2434019 + T-rich Low_complexity Low_complexity 1 48 0 590 239 137 32 chr5 200651835 200652119 -2433413 - MER113 DNA MER1_type? -77 444 131 205 268 70 0 chr5 200652317 200652388 -2433144 + L2 LINE L2 2986 3061 -211 373 272 0 0 chr5 200652534 200652626 -2432906 - Charlie8 DNA MER1_type -2222 195 104 27 29 0 0 chr5 200653718 200653752 -2431780 + GC_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 200653828 200653852 -2431680 + GC_rich Low_complexity Low_complexity 1 24 0 236 133 48 12 chr5 200653892 200653975 -2431557 + CT-rich Low_complexity Low_complexity 2 87 0 303 161 0 0 chr5 200654181 200654237 -2431295 + (CTG)n Simple_repeat Simple_repeat 3 58 0 21 0 0 0 chr5 200654384 200654405 -2431127 + GC_rich Low_complexity Low_complexity 1 21 0 260 348 19 0 chr5 200656002 200656163 -2429369 + (TG)n Simple_repeat Simple_repeat 2 165 0 2298 74 0 46 chr5 200657728 200658051 -2427481 - AluY SINE Alu -3 308 1 203 152 22 0 chr5 200658051 200658097 -2427435 + CT-rich Low_complexity Low_complexity 3 49 0 * 219 139 0 0 chr5 200658087 200658123 -2427409 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 693 159 0 0 chr5 200658123 200658230 -2427302 - AluSp SINE Alu -206 107 1 226 325 98 8 chr5 200658332 200658455 -2427077 - MIR SINE MIR -55 207 74 468 324 130 5 chr5 200658706 200658913 -2426619 - MIR SINE MIR -28 234 2 395 268 123 17 chr5 200659923 200660102 -2425430 - MLT1K LTR MaLR -8 580 383 356 326 54 43 chr5 200660549 200660828 -2424704 + L2 LINE L2 2538 2819 -495 183 281 94 0 chr5 200661128 200661192 -2424340 - MIR SINE MIR -92 170 101 314 340 13 6 chr5 200661974 200662130 -2423402 + (TG)n Simple_repeat Simple_repeat 1 157 0 441 280 0 0 chr5 200662833 200662940 -2422592 - HsTC2 DNA Tc2 0 1898 1792 296 256 225 0 chr5 200663105 200663234 -2422298 - HsTC2 DNA Tc2 -1512 386 229 484 232 28 7 chr5 200663522 200663664 -2421868 + MER21B LTR ERV1 303 447 -416 1123 202 3 18 chr5 200663989 200664280 -2421252 + MER33 DNA MER1_type 1 274 -50 313 283 62 62 chr5 200664494 200664671 -2420861 - L1M4 LINE L1 -1599 4547 4371 370 309 42 0 chr5 200664674 200664839 -2420693 - L1M4 LINE L1 -1801 4345 4174 353 395 46 28 chr5 200664845 200665063 -2420469 - L1M4 LINE L1 -2011 4135 3914 2070 121 23 0 chr5 200665579 200665884 -2419648 + AluSx SINE Alu 1 312 0 373 344 8 0 chr5 200665961 200666086 -2419446 - MER5B DNA MER1_type -34 144 19 356 208 10 0 chr5 200666689 200666785 -2418747 + C-rich Low_complexity Low_complexity 4 100 0 363 236 11 0 chr5 200666907 200666996 -2418536 + MER21B LTR ERV1 1 90 -773 862 224 73 8 chr5 200667112 200667357 -2418175 + MER21B LTR ERV1 287 547 -316 802 233 94 23 chr5 200667402 200667668 -2417864 + MER21B LTR ERV1 528 812 -51 720 236 0 0 chr5 200667846 200668024 -2417508 + CT-rich Low_complexity Low_complexity 2 179 0 312 27 0 0 chr5 200668390 200668427 -2417105 + (CA)n Simple_repeat Simple_repeat 2 38 0 291 319 59 28 chr5 200668936 200669190 -2416342 - MLT1K LTR MaLR -284 304 43 281 362 40 11 chr5 200669485 200669659 -2415873 + L3 LINE CR1 816 994 -583 400 262 90 0 chr5 200669809 200669931 -2415601 - Charlie4 DNA MER1_type -14 1947 1815 359 127 0 0 chr5 200669931 200669986 -2415546 + Alu SINE Alu 1 55 -248 305 281 33 52 chr5 200672831 200672984 -2412548 - Charlie8 DNA MER1_type -2209 208 59 2369 55 0 26 chr5 200673553 200673860 -2411672 - AluY SINE Alu -12 299 1 519 296 114 0 chr5 200673863 200674083 -2411449 + L2 LINE L2 2726 2970 -344 250 236 0 0 chr5 200674239 200674294 -2411238 - L2 LINE L2 -1 3312 3258 1542 196 25 0 chr5 200674606 200674886 -2410646 + AluJb SINE Alu 3 289 -23 401 206 130 15 chr5 200674890 200675021 -2410511 - MIR SINE MIR -71 191 46 248 273 141 0 chr5 200677044 200677143 -2408389 + MLT1L LTR MaLR 503 615 0 212 125 21 21 chr5 200678753 200678801 -2406731 + T-rich Low_complexity Low_complexity 1 48 0 590 239 137 32 chr5 200679123 200679407 -2406125 - MER113 DNA MER1_type? -77 444 131 205 268 70 0 chr5 200679605 200679676 -2405856 + L2 LINE L2 2986 3061 -211 375 286 0 0 chr5 200679816 200679914 -2405618 - Charlie8 DNA MER1_type -2216 201 104 27 29 0 0 chr5 200681007 200681041 -2404491 + GC_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 200681117 200681141 -2404391 + GC_rich Low_complexity Low_complexity 1 24 0 236 133 48 12 chr5 200681181 200681264 -2404268 + CT-rich Low_complexity Low_complexity 2 87 0 303 161 0 0 chr5 200681470 200681526 -2404006 + (CTG)n Simple_repeat Simple_repeat 3 58 0 21 0 0 0 chr5 200681673 200681694 -2403838 + GC_rich Low_complexity Low_complexity 1 21 0 260 348 19 0 chr5 200683291 200683452 -2402080 + (TG)n Simple_repeat Simple_repeat 2 165 0 2265 80 0 46 chr5 200685014 200685338 -2400194 - AluY SINE Alu -2 309 1 203 152 22 0 chr5 200685338 200685384 -2400148 + CT-rich Low_complexity Low_complexity 3 49 0 * 219 139 0 0 chr5 200685374 200685410 -2400122 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 706 149 0 0 chr5 200685410 200685517 -2400015 - AluSp SINE Alu -206 107 1 226 325 98 8 chr5 200685619 200685742 -2399790 - MIR SINE MIR -55 207 74 468 324 130 5 chr5 200685993 200686200 -2399332 - MIR SINE MIR -28 234 2 395 268 123 17 chr5 200687210 200687389 -2398143 - MLT1K LTR MaLR -8 580 383 356 326 54 43 chr5 200687836 200688115 -2397417 + L2 LINE L2 2538 2819 -495 183 281 94 0 chr5 200688415 200688479 -2397053 - MIR SINE MIR -92 170 101 300 346 13 6 chr5 200689261 200689417 -2396115 + (TG)n Simple_repeat Simple_repeat 1 157 0 431 290 0 0 chr5 200690117 200690224 -2395308 - HsTC2 DNA Tc2 0 1898 1792 283 264 225 0 chr5 200690389 200690518 -2395014 - HsTC2 DNA Tc2 -1512 386 229 484 232 28 7 chr5 200690806 200690948 -2394584 + MER21B LTR ERV1 303 447 -416 1123 202 3 18 chr5 200691274 200691565 -2393967 + MER33 DNA MER1_type 1 274 -50 370 309 42 0 chr5 200691959 200692124 -2393408 - L1 LINE L1 -1801 4345 4174 353 395 46 28 chr5 200692130 200692348 -2393184 - L1 LINE L1 -2011 4135 3914 2070 121 23 0 chr5 200692864 200693169 -2392363 + AluSx SINE Alu 1 312 0 373 344 8 0 chr5 200693246 200693371 -2392161 - MER5B DNA MER1_type -34 144 19 356 208 10 0 chr5 200693974 200694070 -2391462 + C-rich Low_complexity Low_complexity 4 100 0 363 236 11 0 chr5 200694192 200694281 -2391251 + MER21B LTR ERV1 1 90 -773 862 224 73 8 chr5 200694397 200694642 -2390890 + MER21B LTR ERV1 287 547 -316 802 233 94 23 chr5 200694687 200694953 -2390579 + MER21B LTR ERV1 528 812 -51 413 238 9 32 chr5 200695146 200695395 -2390137 + GA-rich Low_complexity Low_complexity 1 243 0 263 231 16 48 chr5 200695577 200695763 -2389769 + CT-rich Low_complexity Low_complexity 1 180 0 2821 16 0 0 chr5 200696842 200697159 -2388373 - AluYb8 SINE Alu -1 317 1 439 342 76 50 chr5 200697392 200697650 -2387882 - L1M4 LINE L1 -1080 5066 4795 2401 75 0 0 chr5 200697650 200697958 -2387574 - AluY SINE Alu -3 308 1 439 342 76 50 chr5 200697958 200698041 -2387491 - L1M4 LINE L1 -1351 4795 4716 206 371 0 0 chr5 200698065 200698127 -2387405 + L2 LINE L2 3251 3312 -1 2454 46 0 13 chr5 200698674 200698978 -2386554 + AluY SINE Alu 2 301 -10 310 253 36 0 chr5 200699774 200699857 -2385675 + Charlie8 DNA MER1_type 1 86 -2331 243 88 0 0 chr5 200700111 200700145 -2385387 + (TCTCCC)n Simple_repeat Simple_repeat 5 38 0 251 295 0 39 chr5 200700262 200700340 -2385192 + MIR SINE MIR 117 191 -71 181 344 43 11 chr5 200700588 200700681 -2384851 + L3 LINE CR1 899 994 -583 400 262 90 0 chr5 200700831 200700953 -2384579 - Charlie4a DNA MER1_type -14 494 362 2021 139 3 3 chr5 200700953 200701262 -2384270 + AluSx SINE Alu 1 309 -3 2202 176 22 20 chr5 200701316 200701815 -2383717 - L1MB8 LINE L1 0 6178 5679 588 324 44 0 chr5 200701815 200702090 -2383442 - Charlie4a DNA MER1_type -183 325 39 246 266 38 13 chr5 200703223 200703302 -2382230 + MIR SINE MIR 63 143 -119 304 380 64 18 chr5 200703553 200703724 -2381808 - L1ME4a LINE L1 -142 5979 5801 966 293 24 38 chr5 200704500 200704950 -2380582 - MLT1K LTR MaLR 0 588 145 2126 109 0 39 chr5 200705026 200705337 -2380195 + AluY SINE Alu 1 299 -12 305 303 7 32 chr5 200706089 200706244 -2379288 + (TG)n Simple_repeat Simple_repeat 1 151 0 * 354 243 57 14 chr5 200706135 200706275 -2379257 + (CATG)n Simple_repeat Simple_repeat 2 147 0 339 303 19 26 chr5 200706437 200706592 -2378940 + (CGTG)n Simple_repeat Simple_repeat 1 154 0 201 250 0 0 chr5 200708589 200708649 -2376883 + CT-rich Low_complexity Low_complexity 1 60 0 1603 165 35 18 chr5 200708694 200708979 -2376553 - AluJo SINE Alu -18 294 5 264 348 6 11 chr5 200709528 200709706 -2375826 - HAL1 LINE L1 -1035 1472 1296 180 254 221 57 chr5 200710955 200711077 -2374455 + MIR SINE MIR 9 150 -112 189 0 0 0 chr5 200711231 200711252 -2374280 + (CACGC)n Simple_repeat Simple_repeat 4 24 0 209 200 0 0 chr5 200711861 200711901 -2373631 + (TG)n Simple_repeat Simple_repeat 2 41 0 209 200 0 0 chr5 200712033 200712073 -2373459 + (TG)n Simple_repeat Simple_repeat 2 41 0 200 205 0 0 chr5 200712120 200712159 -2373373 + (TG)n Simple_repeat Simple_repeat 2 40 0 316 244 0 0 chr5 200712416 200712494 -2373038 - HAL1 LINE L1 -185 2322 2245 1384 230 48 48 chr5 200712577 200712924 -2372608 - MLT1D LTR MaLR 0 505 156 1464 206 97 3 chr5 200712924 200713254 -2372278 - MLT1A1 LTR MaLR 0 365 5 1384 230 48 48 chr5 200713254 200713410 -2372122 - MLT1D LTR MaLR -348 157 2 2659 151 47 4 chr5 200713572 200714037 -2371495 - MER31A LTR ERV1 0 485 1 388 228 234 0 chr5 200714768 200714913 -2370619 - MER5A DNA MER1_type 0 189 11 193 129 125 42 chr5 200715650 200715721 -2369811 - MIR SINE MIR -60 148 61 1915 108 3 10 chr5 200715725 200716013 -2369519 - AluSg SINE Alu -2 308 23 414 319 250 2 chr5 200717498 200717986 -2367546 - L2 LINE L2 -30 3283 2650 3440 246 85 40 chr5 200718923 200721389 -2364143 - L1ME LINE L1 -2007 4073 465 581 256 12 116 chr5 200722402 200722749 -2362783 + L2 LINE L2 2739 3049 -223 261 0 0 0 chr5 200723075 200723104 -2362428 + (T)n Simple_repeat Simple_repeat 1 29 0 1369 73 0 11 chr5 200723125 200723304 -2362228 - AluY SINE Alu -134 177 1 379 272 22 0 chr5 200723974 200724066 -2361466 + MIR SINE MIR 61 154 -108 308 294 184 15 chr5 200724079 200724215 -2361317 - MIR SINE MIR -55 207 49 205 306 67 52 chr5 200724793 200724927 -2360605 - L2 LINE L2 0 3272 3137 1632 217 35 51 chr5 200725187 200725364 -2360168 + MLT1D LTR MaLR 1 179 -326 2346 68 0 3 chr5 200725364 200725660 -2359872 - AluY SINE Alu -2 309 15 1632 217 35 51 chr5 200725660 200725925 -2359607 + MLT1D LTR MaLR 179 447 -58 423 0 0 0 chr5 200725925 200725972 -2359560 + (TG)n Simple_repeat Simple_repeat 2 48 0 2290 68 0 0 chr5 200725972 200726253 -2359279 - AluY SINE Alu -28 283 3 1632 217 35 51 chr5 200726253 200726301 -2359231 + MLT1D LTR MaLR 445 485 -20 1346 199 38 0 chr5 200726915 200727207 -2358325 - MLT1A1 LTR MaLR -8 357 55 1523 167 42 4 chr5 200731239 200731503 -2354029 - AluJo SINE Alu -18 294 21 1924 133 6 38 chr5 200731584 200731899 -2353633 + AluSg SINE Alu 1 305 -5 1453 199 7 24 chr5 200733466 200733779 -2351753 + AluJo SINE Alu 1 308 0 397 221 34 0 chr5 200734607 200734728 -2350804 + L2 LINE L2 2871 3000 -313 1707 247 52 121 chr5 200734847 200735026 -2350506 - L1MC4a LINE L1 0 7808 7618 2610 174 60 2 chr5 200735026 200735457 -2350075 - MSTB2 LTR MaLR -1 456 1 1707 247 52 121 chr5 200735457 200736315 -2349217 - L1MC4a LINE L1 -190 7618 6843 208 171 24 0 chr5 200736562 200736603 -2348929 + (CTGTG)n Simple_repeat Simple_repeat 5 46 0 1496 202 56 35 chr5 200738437 200738814 -2346718 + MLT1B LTR MaLR 1 385 -5 2150 100 3 13 chr5 200739268 200739577 -2345955 - AluSx SINE Alu -6 306 1 333 357 156 0 chr5 200740416 200740615 -2344917 - MIR SINE MIR -31 231 2 2098 117 0 16 chr5 200740822 200741129 -2344403 + AluSx SINE Alu 1 302 -10 2166 127 0 0 chr5 200741150 200741458 -2344074 - AluSg SINE Alu 0 310 3 269 71 0 0 chr5 200741470 200741512 -2344020 - Alu SINE Alu -13 289 248 189 0 0 0 chr5 200741518 200741539 -2343993 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1570 130 54 18 chr5 200741558 200741834 -2343698 - AluSg SINE Alu -1 309 24 472 343 59 61 chr5 200741846 200742237 -2343295 - L1MDa LINE L1 -3992 2548 2159 837 97 0 9 chr5 200742578 200742691 -2342841 - AluY SINE Alu -199 112 1 3655 187 66 16 chr5 200742805 200744316 -2341216 + L1MB7 LINE L1 4601 6184 0 2225 113 0 0 chr5 200744326 200744626 -2340906 + AluSx SINE Alu 1 300 -12 462 252 58 0 chr5 200744627 200744766 -2340766 - MER113 DNA MER1_type? -83 438 292 236 143 0 0 chr5 200744977 200745019 -2340513 + L1MB7 LINE L1 6009 6050 -134 261 275 206 38 chr5 200745039 200745170 -2340362 - MIR3 SINE MIR -39 169 17 240 338 26 0 chr5 200748645 200748722 -2336810 + MIR3 SINE MIR 82 160 -48 930 255 113 28 chr5 200749465 200749924 -2335608 - MLT1D LTR MaLR 0 505 8 201 374 53 20 chr5 200750255 200750501 -2335031 + L2 LINE L2 2856 3109 -163 408 212 44 18 chr5 200750905 200751018 -2334514 - Charlie8 DNA MER1_type -2255 162 47 266 132 0 29 chr5 200751173 200751241 -2334291 + (CAGGG)n Simple_repeat Simple_repeat 4 69 0 232 347 82 6 chr5 200751669 200751839 -2333693 - Charlie8 DNA MER1_type -2234 183 1 21 0 0 0 chr5 200752740 200752761 -2332771 + GC_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr5 200754782 200754806 -2330726 + (TG)n Simple_repeat Simple_repeat 2 25 0 1302 241 76 19 chr5 200755644 200755664 -2329868 - MLT1D LTR MaLR -48 457 440 2328 121 45 22 chr5 200755664 200756020 -2329512 + THE1B LTR MaLR 1 364 0 1302 241 76 19 chr5 200756020 200756431 -2329101 - MLT1D LTR MaLR -65 440 1 228 218 0 0 chr5 200757200 200757255 -2328277 - Charlie8 DNA MER1_type -2274 143 89 1959 206 93 17 chr5 200758654 200759116 -2326416 - MLT1D LTR MaLR -4 501 5 614 311 87 25 chr5 200762495 200762999 -2322533 - L2 LINE L2 -3 3269 2723 426 304 66 43 chr5 200764034 200764291 -2321241 - L1ME LINE L1 -605 5516 5254 330 320 139 26 chr5 200764578 200764772 -2320760 - MIR SINE MIR -12 250 35 211 273 0 52 chr5 200764929 200765006 -2320526 - MIR SINE MIR -62 146 74 228 341 37 0 chr5 200765020 200765102 -2320430 + L2 LINE L2 3229 3313 0 513 279 0 8 chr5 200765358 200765480 -2320052 + MER45A DNA AcHobo 58 178 0 269 286 125 9 chr5 200765940 200766052 -2319480 - L2 LINE L2 -1 3271 3147 343 287 37 0 chr5 200767452 200767560 -2317972 - Charlie8 DNA MER1_type -2263 154 43 180 217 0 65 chr5 200768444 200768490 -2317042 + MIR3 SINE MIR 117 159 -49 492 276 155 31 chr5 200768516 200768806 -2316726 + MER102b DNA MER1_type 16 341 0 194 62 31 0 chr5 200768836 200768868 -2316664 + (TC)n Simple_repeat Simple_repeat 1 33 0 643 192 19 3 chr5 200770135 200770459 -2315073 + (TCCA)n Simple_repeat Simple_repeat 1 329 0 1118 189 66 0 chr5 200770892 200771120 -2314412 - L1MB7 LINE L1 -58 6126 5884 2031 112 0 7 chr5 200771739 200772035 -2313497 - AluSx SINE Alu -18 294 1 1161 311 99 23 chr5 200772052 200773088 -2312444 + L1MEc LINE L1 2153 3228 -2987 1859 146 0 7 chr5 200773107 200773401 -2312131 + AluJb SINE Alu 21 312 0 301 207 37 24 chr5 200773427 200773509 -2312023 - Charlie8 DNA MER1_type -2209 208 126 736 159 21 14 chr5 200773652 200773797 -2311735 - L1M4 LINE L1 -482 5702 5557 258 239 91 23 chr5 200774234 200774322 -2311210 - MIR SINE MIR -166 96 3 868 229 6 6 chr5 200774836 200775019 -2310513 - L1MB8 LINE L1 -1 6177 5995 6693 231 81 28 chr5 200775020 200779475 -2306057 - L1M4 LINE L1 -1942 4702 14 366 290 66 85 chr5 200779458 200779601 -2305931 - L1MEc LINE L1 -4307 2089 1945 * 2805 6 0 0 chr5 200779601 200779912 -2305620 - AluY SINE Alu 0 311 1 366 290 66 85 chr5 200779912 200779947 -2305585 - L1MEc LINE L1 -4451 1945 1911 2105 231 28 12 chr5 200779947 200780444 -2305088 - MLT1D LTR MaLR 0 505 1 366 290 66 85 chr5 200780444 200780630 -2304902 - L1MEc LINE L1 -4485 1911 1731 3601 223 82 36 chr5 200780656 200782332 -2303200 - L1M4c LINE L1 -4452 2686 802 2569 224 18 58 chr5 200782346 200782970 -2302562 - L1M4c LINE L1 -6257 602 4 453 316 158 22 chr5 200783137 200783409 -2302123 - MLT1K LTR MaLR -136 452 144 608 322 192 0 chr5 200784792 200785276 -2300256 + L2 LINE L2 791 1367 -1947 1108 266 100 100 chr5 200785278 200786269 -2299263 + L2 LINE L2 1709 2699 -615 576 210 114 3 chr5 200786269 200786503 -2299029 - L1MB8 LINE L1 0 6178 5900 394 324 119 15 chr5 200786532 200786867 -2298665 + L2 LINE L2 2690 3055 -258 1635 143 41 138 chr5 200787869 200788128 -2297404 - MLT1A2 LTR MaLR 0 374 168 1469 191 3 27 chr5 200788128 200788421 -2297111 - AluJo SINE Alu -26 286 1 1635 143 41 138 chr5 200788421 200788575 -2296957 - MLT1A2 LTR MaLR -206 168 1 1524 211 0 0 chr5 200788592 200788877 -2296655 - AluJb SINE Alu -19 293 9 245 318 57 0 chr5 200790303 200790391 -2295141 - L2 LINE L2 -251 3021 2929 1927 123 3 29 chr5 200791677 200791993 -2293539 - AluSg SINE Alu 0 310 3 715 286 74 9 chr5 200792855 200793086 -2292446 + MIR SINE MIR 7 252 -10 904 173 0 23 chr5 200793445 200793618 -2291914 - FRAM SINE Alu 0 40 1 1537 214 25 49 chr5 200793859 200794265 -2291267 - L1MA10 LINE L1 -62 6272 5877 2297 63 3 0 chr5 200794372 200794659 -2290873 - AluSq SINE Alu -19 294 7 186 297 54 0 chr5 200796332 200796443 -2289089 - MIR3 SINE MIR -83 125 9 254 367 7 7 chr5 200798536 200798686 -2286846 - L1MB8 LINE L1 -2081 5727 5578 1892 144 13 32 chr5 200798823 200799135 -2286397 + AluSx SINE Alu 7 312 0 349 125 0 28 chr5 200799139 200799211 -2286321 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 4188 114 43 55 chr5 200799251 200800017 -2285515 - LTR1 LTR ERV1 0 785 29 245 279 0 19 chr5 200800061 200800165 -2285367 - L1MB8 LINE L1 -803 5343 5242 611 281 276 17 chr5 200800570 200800975 -2284557 + Charlie8 DNA MER1_type 3 512 -1905 186 236 0 0 chr5 200801524 200801579 -2283953 + (TG)n Simple_repeat Simple_repeat 2 56 0 288 273 0 13 chr5 200801579 200801656 -2283876 + (CA)n Simple_repeat Simple_repeat 1 76 0 288 291 0 0 chr5 200801702 200801877 -2283655 + (TG)n Simple_repeat Simple_repeat 1 175 0 494 228 0 11 chr5 200801930 200802110 -2283422 + (TG)n Simple_repeat Simple_repeat 2 179 0 219 204 0 0 chr5 200802122 200802176 -2283356 + (TG)n Simple_repeat Simple_repeat 2 55 0 311 307 176 13 chr5 200806020 200806173 -2279359 - MLT1K LTR MaLR -9 579 402 257 256 13 51 chr5 200806303 200806381 -2279151 - MLT1K LTR MaLR -440 148 74 238 323 97 0 chr5 200808126 200808281 -2277251 - L1ME LINE L1 -272 5894 5725 1275 240 16 64 chr5 200809159 200809596 -2275936 - HAL1 LINE L1 -628 1879 1464 867 244 13 29 chr5 200809650 200809888 -2275644 - HAL1 LINE L1 -2270 237 4 2344 91 3 0 chr5 200809920 200810227 -2275305 - AluSp SINE Alu -5 308 1 421 350 85 31 chr5 200810227 200810487 -2275045 - L1ME LINE L1 -1316 4830 4557 351 354 94 38 chr5 200810579 200810867 -2274665 - L1ME LINE L1 -1544 4602 4299 319 391 85 20 chr5 200811946 200812240 -2273292 - L2 LINE L2 -57 3256 2944 308 283 179 55 chr5 200812535 200813228 -2272304 + L1M2 LINE L1 441 1219 -5630 308 263 0 42 chr5 200815281 200815376 -2270156 - Charlie8 DNA MER1_type -2247 170 80 489 198 0 0 chr5 200815779 200815885 -2269647 + (TG)n Simple_repeat Simple_repeat 1 106 0 242 189 162 70 chr5 200817435 200817599 -2267933 + MIR SINE MIR 8 192 -65 2263 37 44 0 chr5 200819337 200819644 -2265888 + AluY SINE Alu 1 319 0 204 313 27 80 chr5 200819648 200819760 -2265772 - MIR SINE MIR -1 261 156 349 298 82 16 chr5 200819826 200820012 -2265520 + MIR SINE MIR 16 212 -50 394 239 68 61 chr5 200820859 200821022 -2264510 + MER3 DNA MER1_type 5 168 -41 2819 221 46 4 chr5 200821025 200821723 -2263809 - L1MB3 LINE L1 -3 6180 5454 242 298 43 43 chr5 200822447 200822588 -2262944 + MLT1I LTR MaLR 80 220 -189 369 294 126 69 chr5 200822780 200823202 -2262330 - L2 LINE L2 -18 3295 2850 2082 97 3 53 chr5 200823569 200823890 -2261642 - AluSx SINE Alu -5 307 3 464 374 73 36 chr5 200823936 200824294 -2261238 - L1ME4a LINE L1 -260 5861 5491 2251 111 0 0 chr5 200824853 200825159 -2260373 + AluSx SINE Alu 7 312 0 1234 225 28 22 chr5 200825289 200825645 -2259887 - MER45B DNA AcHobo 0 1040 683 348 332 51 27 chr5 200825801 200826093 -2259439 - MER45C DNA AcHobo -289 664 366 479 228 24 0 chr5 200826132 200826259 -2259273 - MER45C DNA AcHobo -784 169 40 2282 108 0 0 chr5 200826538 200826844 -2258688 - AluSx SINE Alu -6 306 1 1329 188 99 11 chr5 200827675 200827947 -2257585 - AluJo SINE Alu -16 296 1 968 192 16 0 chr5 200828440 200828622 -2256910 + MER58A DNA MER1_type 6 190 -34 433 300 65 46 chr5 200829703 200830010 -2255522 - MER102b DNA MER1_type -13 328 16 315 286 88 0 chr5 200831635 200831726 -2253806 + L2 LINE L2 3174 3272 0 261 306 0 0 chr5 200831964 200832026 -2253506 + MIR SINE MIR 90 151 -111 185 331 66 30 chr5 200832220 200832386 -2253146 - L2 LINE L2 -168 3104 2933 490 68 14 14 chr5 200834697 200834771 -2250761 - LTR7 LTR ERV1 0 450 377 2968 86 21 11 chr5 200834771 200835247 -2250285 + HERVH LTR ERV1 7233 7713 0 813 130 8 18 chr5 200835247 200835415 -2250117 + LTR7 LTR ERV1 1 218 -232 2101 95 0 33 chr5 200835740 200836046 -2249486 + AluY SINE Alu 1 296 -15 814 147 0 20 chr5 200836065 200836215 -2249317 + LTR7 LTR ERV1 304 450 0 702 236 6 0 chr5 200836229 200836386 -2249146 - MIR SINE MIR -75 187 30 338 198 163 12 chr5 200837909 200837995 -2247537 - L2 LINE L2 -1 3312 3214 190 326 179 5 chr5 200837974 200838170 -2247362 - L2 LINE L2 -364 2950 2721 * 206 324 42 51 chr5 200840235 200840451 -2245081 + L2 LINE L2 2827 3040 -232 2283 94 7 0 chr5 200840857 200841166 -2244366 - AluSx SINE Alu -1 311 1 1257 232 7 17 chr5 200841287 200841589 -2243943 - MLT1A2 LTR MaLR 0 374 76 292 305 94 16 chr5 200842310 200842438 -2243094 - MIR SINE MIR -7 255 118 208 281 101 11 chr5 200843429 200843518 -2242014 - L2 LINE L2 -547 2767 2671 457 221 24 91 chr5 200843536 200843744 -2241788 - Charlie4a DNA MER1_type -16 492 299 243 378 105 0 chr5 200843725 200843934 -2241598 - Charlie4a DNA MER1_type -191 317 87 * 1899 198 56 9 chr5 200844525 200844970 -2240562 - MER74A LTR ERVL -66 492 27 400 343 28 42 chr5 200845232 200845445 -2240087 - MIR SINE MIR -32 230 21 1028 347 70 48 chr5 200845671 200846150 -2239382 + L1 LINE L1 2395 2901 -3245 1929 135 0 7 chr5 200846150 200846424 -2239108 + AluSx SINE Alu 1 272 -40 1028 347 70 48 chr5 200846424 200846753 -2238779 + L1 LINE L1 2901 3221 -2925 317 390 29 4 chr5 200847958 200848199 -2237333 + L1 LINE L1 3622 3868 -2278 280 349 153 17 chr5 200848215 200848450 -2237082 - L2 LINE L2 0 3272 3006 241 299 281 20 chr5 200848648 200849043 -2236489 - L2 LINE L2 -574 2740 2243 329 299 8 8 chr5 200849326 200849443 -2236089 + MER103 DNA DNA 2 118 -48 624 360 48 29 chr5 200849637 200850024 -2235508 + L1 LINE L1 4177 4574 -1572 389 299 139 52 chr5 200850742 200851204 -2234328 + L1ME4a LINE L1 3161 5274 -872 2261 91 13 7 chr5 200851354 200851663 -2233869 - AluSx SINE Alu -1 311 1 822 280 108 20 chr5 200851690 200852143 -2233389 + L1ME4a LINE L1 5603 6095 -26 1682 167 0 24 chr5 200852147 200852471 -2233061 - AluJo SINE Alu 0 319 3 31 44 0 0 chr5 200852518 200852563 -2232969 + AT_rich Low_complexity Low_complexity 1 45 0 340 264 116 47 chr5 200852569 200852698 -2232834 + L3 LINE CR1 549 686 -891 904 244 143 14 chr5 200854172 200854459 -2231073 - MER5C DNA MER1_type 0 324 1 214 353 84 32 chr5 200854757 200854947 -2230585 + L3 LINE CR1 1263 1462 -115 1832 209 22 3 chr5 200855969 200856327 -2229205 - MLT1A1 LTR MaLR 0 365 1 265 287 96 29 chr5 200856624 200856760 -2228772 + MIR SINE MIR 1 145 -117 470 303 48 0 chr5 200856825 200856990 -2228542 - MIR SINE MIR -14 248 76 806 191 18 67 chr5 200857085 200857310 -2228222 + MER20 DNA MER1_type 1 214 -5 197 325 38 0 chr5 200858176 200858256 -2227276 + MIR SINE MIR 70 152 -110 211 273 106 0 chr5 200860388 200860454 -2225078 + L2 LINE L2 2248 2320 -994 238 167 33 17 chr5 200862086 200862146 -2223386 + Charlie8 DNA MER1_type 342 402 -2015 247 269 0 15 chr5 200862548 200862615 -2222917 - MLT1K LTR MaLR -12 576 511 259 281 0 0 chr5 200862880 200862944 -2222588 + MLT1E LTR MaLR 367 430 -163 247 252 117 0 chr5 200863053 200863156 -2222376 - MLT1K LTR MaLR -343 245 131 2520 173 33 7 chr5 200863562 200864014 -2221518 - L1MA5 LINE L1 -2 6298 5835 867 288 55 14 chr5 200864277 200864621 -2220911 - MLT1I LTR MaLR 0 409 52 2218 87 27 0 chr5 200864922 200865221 -2220311 - AluSx SINE Alu -5 307 1 392 288 24 8 chr5 200865552 200865677 -2219855 + MIR SINE MIR 3 129 -133 364 129 143 0 chr5 200865897 200865967 -2219565 + MADE1 DNA Mariner 1 80 0 633 285 117 15 chr5 200866833 200867133 -2218399 + L1ME LINE L1 4786 5054 -1110 2281 89 0 10 chr5 200867133 200867447 -2218085 + AluY SINE Alu 1 311 0 633 285 117 15 chr5 200867447 200867728 -2217804 + L1ME LINE L1 5054 5441 -723 965 146 73 18 chr5 200867728 200867893 -2217639 + FRAM SINE Alu 1 174 -2 2163 88 48 0 chr5 200869874 200870169 -2215363 + AluSx SINE Alu 1 309 -3 246 291 93 80 chr5 200870169 200870470 -2215062 + HAL1 LINE L1 831 1126 -1381 2260 78 3 0 chr5 200870470 200870764 -2214768 + AluY SINE Alu 5 299 -12 246 291 93 80 chr5 200870764 200871061 -2214471 + HAL1 LINE L1 1126 1437 -1070 480 316 7 0 chr5 200874139 200874291 -2211241 - MIR SINE MIR -75 187 35 1973 214 19 37 chr5 200875866 200875928 -2209604 - L1MB5 LINE L1 0 6174 6112 2056 141 0 0 chr5 200875928 200876227 -2209305 + AluSx SINE Alu 1 299 -13 1973 214 19 37 chr5 200876227 200876682 -2208850 - L1MB5 LINE L1 -62 6112 5666 1366 209 115 18 chr5 200877680 200878011 -2207521 - MLT1A1 LTR MaLR -2 363 1 313 295 82 8 chr5 200878585 200878872 -2206660 - LTR16A LTR ERVL -118 332 4 1281 220 53 67 chr5 200879087 200879518 -2206014 + MER69 DNA AcHobo 1 425 -2101 2249 122 0 0 chr5 200879738 200880050 -2205482 + AluSx SINE Alu 1 312 0 1760 254 31 22 chr5 200880163 200880805 -2204727 + MER69 DNA AcHobo 1453 2100 -426 4096 205 53 19 chr5 200880918 200880972 -2204560 - L1MB7 LINE L1 -9 6986 6935 2174 116 0 6 chr5 200880972 200881283 -2204249 + AluSq SINE Alu 1 309 -4 4096 205 53 19 chr5 200881283 200883133 -2202399 - L1MB7 LINE L1 -60 6935 5012 810 196 29 33 chr5 200883134 200883374 -2202158 + MER69 DNA AcHobo 1458 1696 -830 304 234 75 0 chr5 200883467 200883561 -2201971 - MLT1A1 LTR MaLR -202 163 63 5411 202 42 101 chr5 200883561 200883674 -2201858 - L1MB7 LINE L1 -5123 1732 1614 2117 106 20 3 chr5 200883674 200883976 -2201556 - AluSx SINE Alu -5 307 1 5411 202 42 101 chr5 200883976 200884767 -2200765 - L1MB7 LINE L1 -5241 1614 778 304 196 0 0 chr5 200884767 200884823 -2200709 + Tigger4(Zombi) DNA MER2_type 1 56 -2675 * 368 192 14 0 chr5 200884793 200884866 -2200666 + Tigger4(Zombi) DNA MER2_type 2658 2731 0 * 5411 202 42 101 chr5 200884866 200885689 -2199843 - L1MB7 LINE L1 -6120 735 18 816 160 0 88 chr5 200885702 200885896 -2199636 + MER58A DNA MER1_type 42 218 -6 683 244 89 13 chr5 200885924 200886013 -2199519 + MER69 DNA AcHobo 2172 2253 -273 2197 76 6 50 chr5 200886013 200886330 -2199202 + AluSx SINE Alu 1 303 -9 683 244 89 13 chr5 200886330 200886543 -2198989 + MER69 DNA AcHobo 2253 2497 -29 219 304 32 40 chr5 200888926 200889051 -2196481 - MIR SINE MIR -79 183 60 400 254 79 0 chr5 200889739 200889853 -2195679 - MLT1K LTR MaLR -2 586 464 2230 96 0 0 chr5 200890139 200890441 -2195091 - AluY SINE Alu -9 302 1 2224 88 0 23 chr5 200890441 200890747 -2194785 - AluSx SINE Alu -13 299 1 214 404 11 0 chr5 200891290 200891384 -2194148 + MIR SINE MIR 162 256 -6 314 268 154 24 chr5 200891407 200891530 -2194002 - MER5A DNA MER1_type -8 181 43 267 302 9 28 chr5 200891436 200891542 -2193990 + MER5A DNA MER1_type 66 169 -20 * 409 139 0 70 chr5 200891939 200892097 -2193435 + (CTGGGG)n Simple_repeat Simple_repeat 2 148 0 1213 234 14 37 chr5 200892300 200892651 -2192881 - MER74B LTR ERVL -224 398 56 1857 90 66 31 chr5 200892807 200893095 -2192437 + AluSx SINE Alu 1 298 -14 2237 92 3 10 chr5 200893249 200893554 -2191978 + AluSx SINE Alu 1 303 -9 726 157 26 0 chr5 200893760 200893875 -2191657 + FLAM_C SINE Alu 1 118 -15 194 125 0 25 chr5 200895398 200895438 -2190094 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2152 90 20 3 chr5 200895487 200895788 -2189744 - AluY SINE Alu -5 306 1 476 291 112 8 chr5 200895788 200896056 -2189476 + MER113 DNA MER1_type? 131 426 -95 216 270 169 0 chr5 200897066 200897155 -2188377 + MIR SINE MIR 41 144 -64 2698 229 65 29 chr5 200897673 200898128 -2187404 - MER82 DNA MER2_type 0 653 167 2066 78 3 57 chr5 200898128 200898459 -2187073 + AluSq SINE Alu 1 313 0 2698 229 65 29 chr5 200898459 200898633 -2186899 - MER82 DNA MER2_type -486 167 1 345 352 98 25 chr5 200899682 200899997 -2185535 + L2 LINE L2 2640 2977 -337 1095 205 19 0 chr5 200900103 200900318 -2185214 - MER20 DNA MER1_type 0 219 1 1717 207 126 83 chr5 200902609 200903111 -2182421 - MER77 LTR ERV1 0 605 126 1726 159 0 10 chr5 200903111 200903400 -2182132 + AluJb SINE Alu 1 286 -26 218 32 32 0 chr5 200903405 200903436 -2182096 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1717 207 126 83 chr5 200903436 200903507 -2182025 - MER77 LTR ERV1 -482 123 1 656 266 83 46 chr5 200907971 200908343 -2177189 - MER113 DNA MER1_type? -110 411 26 231 296 88 56 chr5 200908809 200908877 -2176655 - L2 LINE L2 -6 3266 3191 1029 225 5 14 chr5 200908877 200909005 -2176527 - MER58A DNA MER1_type -2200 220 93 2236 82 53 0 chr5 200909005 200909287 -2176245 + AluSg SINE Alu 1 297 -13 1029 225 5 14 chr5 200909287 200909380 -2176152 - MER58A DNA MER1_type -2327 93 1 231 296 88 56 chr5 200909380 200909436 -2176096 - L2 LINE L2 -81 3191 3138 423 197 0 30 chr5 200911119 200911251 -2174281 + CT-rich Low_complexity Low_complexity 3 130 0 736 178 109 23 chr5 200916548 200916722 -2168810 - MER53 DNA DNA 0 189 1 2500 66 3 0 chr5 200916743 200917045 -2168487 - AluY SINE Alu -8 303 1 317 247 76 137 chr5 200917151 200917329 -2168203 - L1M4 LINE L1 -3426 2720 2533 2132 123 3 16 chr5 200917329 200917646 -2167886 - AluSq SINE Alu 0 313 1 317 247 76 137 chr5 200917646 200917737 -2167795 - L1M4 LINE L1 -3613 2533 2438 2055 110 7 0 chr5 200917737 200918062 -2167470 - AluSx SINE Alu 0 327 1 317 247 76 137 chr5 200918062 200918410 -2167122 - L1M4 LINE L1 -3708 2438 2139 1200 236 139 8 chr5 200918661 200918772 -2166760 - L1ME1 LINE L1 -9 6157 6062 2269 103 0 7 chr5 200918772 200919073 -2166459 + AluSx SINE Alu 1 299 -13 1200 236 139 8 chr5 200919073 200919329 -2166203 - L1ME1 LINE L1 -104 6062 5742 1710 221 69 24 chr5 200919330 200919824 -2165708 - L1ME1 LINE L1 -755 5391 4876 690 221 20 0 chr5 200919826 200919975 -2165557 - L1M4 LINE L1 -1073 5073 4922 3439 16 10 8 chr5 200920002 200920389 -2165143 - L1PA3 LINE L1 -1 6154 5767 297 308 0 17 chr5 200920538 200920655 -2164877 + CT-rich Low_complexity Low_complexity 2 116 0 1024 229 83 92 chr5 200920745 200921168 -2164364 - MLT1E2 LTR MaLR -2 624 206 283 224 0 0 chr5 200921217 200921275 -2164257 - LTR33 LTR ERVL -463 58 1 427 180 14 93 chr5 200921348 200921487 -2164045 - MLT1E2 LTR MaLR -447 179 52 2745 79 11 14 chr5 200921543 200921899 -2163633 - THE1A LTR MaLR 0 355 1 1239 114 6 0 chr5 200923667 200923833 -2161699 + AluSx SINE Alu 1 167 -145 701 256 64 90 chr5 200924019 200924442 -2161090 + MLT1H LTR MaLR 13 392 -17 1288 116 17 0 chr5 200925044 200925225 -2160307 - AluSg SINE Alu -126 184 1 214 378 101 7 chr5 200925257 200925405 -2160127 + MIR SINE MIR 31 192 -70 25 51 0 0 chr5 200926012 200926051 -2159481 + AT_rich Low_complexity Low_complexity 1 39 0 199 236 28 0 chr5 200926667 200926739 -2158793 + CT-rich Low_complexity Low_complexity 2 75 0 186 241 23 23 chr5 200927090 200927223 -2158309 + GA-rich Low_complexity Low_complexity 2 134 0 213 108 0 0 chr5 200927635 200927672 -2157860 + (CA)n Simple_repeat Simple_repeat 2 38 0 2024 212 127 2 chr5 200927929 200928378 -2157154 + MLT1D LTR MaLR 1 505 0 4916 127 46 16 chr5 200929544 200930350 -2155182 + Tigger4(Zombi) DNA MER2_type 1730 2559 -172 1182 168 18 0 chr5 200930373 200930599 -2154933 + MER46B DNA MER2_type 131 235 -1 378 200 117 117 chr5 200931086 200931231 -2154301 + MLT1E1 LTR MaLR 5 149 -505 1254 242 36 8 chr5 200931730 200932093 -2153439 - L1PA15-16 LINE L1 -3931 2918 2546 * 5246 249 81 41 chr5 200932085 200933638 -2151894 - L1PA15-16 LINE L1 -5173 1666 53 1404 240 82 48 chr5 200933702 200934373 -2151159 + Looper DNA T2_type 13 706 -852 3106 211 27 52 chr5 200935003 200935091 -2150441 + L1P LINE L1 2239 2328 -3818 2268 218 50 61 chr5 200935091 200935651 -2149881 + MLT2B3 LTR ERVL 1 554 0 3106 211 27 52 chr5 200935651 200935768 -2149764 + L1P LINE L1 2328 2446 -3700 495 0 0 0 chr5 200935768 200935823 -2149709 + (TA)n Simple_repeat Simple_repeat 2 56 0 3106 211 27 52 chr5 200935823 200936269 -2149263 + L1P LINE L1 2446 2868 -3278 1906 144 4 0 chr5 200936269 200936547 -2148985 - AluSx SINE Alu -29 283 5 3106 211 27 52 chr5 200936547 200936737 -2148795 + L1P LINE L1 2868 3061 -3085 233 306 69 65 chr5 200937852 200938068 -2147464 + L2 LINE L2 2301 2517 -797 1121 231 101 57 chr5 200938146 200938584 -2146948 + MLT1C LTR MaLR 9 465 -2 206 136 45 0 chr5 200938987 200939031 -2146501 + L2 LINE L2 2924 2969 -303 25 0 0 0 chr5 200939212 200939237 -2146295 + AT_rich Low_complexity Low_complexity 1 25 0 262 285 117 7 chr5 200939417 200939554 -2145978 + MIR SINE MIR 86 237 -25 1373 256 95 63 chr5 200939692 200940642 -2144890 - L1MC5 LINE L1 -549 7412 6430 23 0 0 0 chr5 200940670 200940693 -2144839 + AT_rich Low_complexity Low_complexity 1 23 0 1461 92 0 0 chr5 200941098 200941283 -2144249 + AluSx SINE Alu 3 187 -125 1314 207 20 8 chr5 200941498 200941749 -2143783 + MLT1E LTR MaLR 334 587 -6 261 295 0 13 chr5 200942273 200942351 -2143181 + LTR33A LTR ERVL 444 520 -3 2798 22 0 0 chr5 200943619 200943931 -2141601 + AluYb8 SINE Alu 1 312 -6 1216 171 95 4 chr5 200944129 200944161 -2141371 + L1MC/D LINE L1 5161 5189 -1123 234 0 0 0 chr5 200944161 200944187 -2141345 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1216 171 95 4 chr5 200944187 200944488 -2141044 + L1MC/D LINE L1 5189 5527 -785 1809 160 7 0 chr5 200945118 200945424 -2140108 - AluSx SINE Alu 0 308 1 21 36 0 0 chr5 200945806 200945834 -2139698 + AT_rich Low_complexity Low_complexity 1 28 0 180 298 0 18 chr5 200946594 200946651 -2138881 + L2 LINE L2 3192 3247 -66 21 36 0 0 chr5 200946910 200946938 -2138594 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 200947940 200947961 -2137571 + AT_rich Low_complexity Low_complexity 1 21 0 247 224 12 118 chr5 200948422 200948507 -2137025 + MER112 DNA MER1_type 2 77 -183 533 206 23 15 chr5 200948555 200948686 -2136846 + MER112 DNA MER1_type 94 225 -35 1284 209 3 71 chr5 200949175 200949472 -2136060 - AluJb SINE Alu -35 277 1 2258 182 32 0 chr5 200949810 200950216 -2135316 - L1MC1 LINE L1 -15 6318 5900 495 175 67 70 chr5 200950238 200950403 -2135129 - L1MC1 LINE L1 -347 5815 5653 1235 199 19 19 chr5 200950422 200950678 -2134854 - L1MC/D LINE L1 -557 5776 5521 2061 114 10 3 chr5 200951065 200951355 -2134177 - AluSc SINE Alu -17 292 1 356 224 132 46 chr5 200951554 200951728 -2133804 + MER53 DNA DNA 1 189 0 416 193 34 0 chr5 200952172 200952260 -2133272 - L1MC1 LINE L1 -11 6322 6232 340 228 25 13 chr5 200952261 200952340 -2133192 - Tigger5 DNA MER2_type -2 2321 2242 340 224 0 53 chr5 200952502 200952578 -2132954 - Tigger5 DNA MER2_type -2249 74 3 573 337 102 0 chr5 200952776 200953070 -2132462 + L2 LINE L2 2537 2860 -454 1362 169 22 0 chr5 200953135 200953360 -2132172 - AluSg/x SINE Alu -1 309 80 1718 87 9 4 chr5 200953629 200953860 -2131672 + AluSp SINE Alu 1 232 -81 258 222 19 0 chr5 200954487 200954541 -2130991 + L2 LINE L2 3257 3311 -2 180 0 0 0 chr5 200954636 200954656 -2130876 + (T)n Simple_repeat Simple_repeat 1 20 0 252 329 60 47 chr5 200954708 200955009 -2130523 + L2 LINE L2 1991 2295 -1019 476 188 54 4 chr5 200956419 200956554 -2128978 + MER61E LTR ERV1 1 798 -484 586 165 77 151 chr5 200956706 200957111 -2128421 + LTR25 LTR ERV1 415 1232 -44 21 57 0 0 chr5 200957569 200957604 -2127928 + AT_rich Low_complexity Low_complexity 1 35 0 1427 180 10 0 chr5 200958915 200959210 -2126322 - L1MA4 LINE L1 -2 6298 6001 183 129 0 0 chr5 200959769 200959800 -2125732 + (CCCA)n Simple_repeat Simple_repeat 2 32 0 2411 54 0 14 chr5 200962268 200962563 -2122969 - AluY SINE Alu -20 291 1 357 24 0 0 chr5 200963888 200963930 -2121602 + (TG)n Simple_repeat Simple_repeat 2 43 0 201 39 0 0 chr5 200964909 200964935 -2120597 + (CGGGGG)n Simple_repeat Simple_repeat 4 29 0 26 0 0 0 chr5 200966707 200966733 -2118799 + AT_rich Low_complexity Low_complexity 1 26 0 452 306 43 43 chr5 200966936 200967145 -2118387 + L2 LINE L2 3105 3313 0 26273 28 3 0 chr5 200967439 200971364 -2114168 - L1PA3 LINE L1 0 6155 2224 567 220 14 28 chr5 200972203 200972344 -2113188 - MER106A DNA MER1_type -97 139 1 847 215 228 35 chr5 200972676 200973171 -2112361 - LTR28 LTR ERV1 -141 495 1 249 269 0 19 chr5 200973300 200973352 -2112180 + L2 LINE L2 3133 3183 -89 847 235 20 0 chr5 200973441 200973637 -2111895 - MLT1B LTR MaLR -2 388 189 204 283 0 0 chr5 200973641 200973687 -2111845 + GA-rich Low_complexity Low_complexity 2 47 0 371 204 152 8 chr5 200973708 200973840 -2111692 - MLT1B LTR MaLR -217 173 23 31 0 0 0 chr5 200973882 200973913 -2111619 + AT_rich Low_complexity Low_complexity 1 31 0 512 242 148 22 chr5 200973946 200974128 -2111404 - MER58A DNA MER1_type -14 210 6 1624 175 24 7 chr5 200974444 200974736 -2110796 - AluSx SINE Alu -15 297 1 369 131 0 0 chr5 200974782 200974843 -2110689 + (TCC)n Simple_repeat Simple_repeat 3 63 0 949 213 4 52 chr5 200975052 200975282 -2110250 + MER20 DNA MER1_type 1 219 0 733 227 131 84 chr5 200975697 200976047 -2109485 + MSTC LTR MaLR 1 374 -54 2183 104 0 25 chr5 200976047 200976365 -2109167 + AluSx SINE Alu 3 312 0 733 227 131 84 chr5 200976365 200976420 -2109112 + MSTC LTR MaLR 374 425 -3 239 172 0 17 chr5 200976616 200976674 -2108858 + GA-rich Low_complexity Low_complexity 4 60 0 207 0 0 0 chr5 200976742 200976765 -2108767 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2205 60 21 7 chr5 200976768 200977052 -2108480 - AluY SINE Alu -23 288 1 329 56 0 37 chr5 200977568 200977622 -2107910 - Alu SINE Alu -13 287 236 335 334 114 59 chr5 200977645 200978281 -2107251 + L2 LINE L2 2638 3313 0 233 340 50 10 chr5 200978847 200978947 -2106585 - MIR SINE MIR -136 126 23 34087 34 30 3 chr5 200979555 200983962 -2101570 - L1P LINE L1 -1617 4529 4 5442 229 62 25 chr5 200983981 200984643 -2100889 - L1M4 LINE L1 -1228 4918 4282 1853 159 0 19 chr5 200984643 200984951 -2100581 - AluJo SINE Alu -10 302 1 5442 229 62 25 chr5 200984951 200985890 -2099642 - L1M4 LINE L1 -1864 4282 3379 2822 19 0 9 chr5 200985890 200986211 -2099321 - AluYb8 SINE Alu 0 318 1 5442 229 62 25 chr5 200986211 200986439 -2099093 - L1M4 LINE L1 -2767 3379 3161 2102 131 17 0 chr5 200986439 200986737 -2098795 - AluSx SINE Alu -7 305 3 5442 229 62 25 chr5 200986737 200986953 -2098579 - L1M4 LINE L1 -2985 3161 2603 347 287 96 20 chr5 200987422 200987830 -2097702 + L1M3a LINE L1 3907 4345 -3220 861 333 17 25 chr5 200987836 200988238 -2097294 + L1MA4 LINE L1 1542 1940 -5546 3731 243 82 29 chr5 200988722 200989075 -2096457 + L1MA4 LINE L1 1837 2170 -5395 2245 83 0 38 chr5 200989075 200989389 -2096143 + AluSc SINE Alu 1 302 -7 3731 243 82 29 chr5 200989389 200989509 -2096023 + L1MA4 LINE L1 2170 2282 -5283 1973 159 0 0 chr5 200989509 200989805 -2095727 + AluSx SINE Alu 1 296 -16 3731 243 82 29 chr5 200989805 200990785 -2094747 + L1MA4 LINE L1 2282 3368 -4197 6739 139 20 23 chr5 200990787 200991865 -2093667 + L1MA4 LINE L1 5461 6540 -1179 2190 134 0 0 chr5 200991865 200992171 -2093361 + AluSx SINE Alu 1 306 -6 6739 139 20 23 chr5 200992171 200992400 -2093132 + L1MA4 LINE L1 6540 6768 -951 180 0 0 0 chr5 200992400 200992420 -2093112 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 6739 139 20 23 chr5 200992420 200993376 -2092156 + L1MA4 LINE L1 6768 7714 -5 2626 49 0 0 chr5 200994097 200994405 -2091127 + AluY SINE Alu 1 308 -3 478 270 115 22 chr5 200994447 200994950 -2090582 + L1M3a LINE L1 4711 5260 -2305 203 0 37 0 chr5 200995132 200995159 -2090373 + (TG)n Simple_repeat Simple_repeat 2 29 0 3629 217 48 45 chr5 200995479 200996294 -2089238 + L1MCb LINE L1 3 819 -5376 198 0 0 0 chr5 200996294 200996316 -2089216 + (CA)n Simple_repeat Simple_repeat 2 23 0 3629 217 48 45 chr5 200996316 200996844 -2088688 + L1MCb LINE L1 819 1344 -4851 5257 192 53 22 chr5 200997265 200997562 -2087970 + Cheshire DNA MER1_type 875 1161 -1259 2329 93 3 3 chr5 200997562 200997863 -2087669 - AluSx SINE Alu -11 301 1 5257 192 53 22 chr5 200997863 200998794 -2086738 + Cheshire DNA MER1_type 1161 2141 -279 3278 193 29 6 chr5 200998804 200999471 -2086061 - L1MB8 LINE L1 -9 6169 5488 323 238 234 31 chr5 200999589 200999816 -2085716 - MLT1F1-int LTR MaLR -788 583 311 313 272 104 0 chr5 200999863 200999988 -2085544 - MLT1F1-int LTR MaLR -1229 142 5 1656 229 55 20 chr5 200999992 201000446 -2085086 - MLT1F1 LTR MaLR 0 567 98 513 265 85 64 chr5 201000446 201000823 -2084709 - L1MDb LINE L1 -5249 834 450 268 252 156 33 chr5 201001674 201001944 -2083588 - L1MC4 LINE L1 -196 7846 7544 22 70 0 0 chr5 201002514 201002557 -2082975 + AT_rich Low_complexity Low_complexity 1 43 0 302 246 84 42 chr5 201002557 201002699 -2082833 - L1MC5 LINE L1 -502 7459 7312 240 379 24 0 chr5 201002683 201002807 -2082725 - L1MC4 LINE L1 -547 7495 7369 * 1337 240 136 42 chr5 201002808 201003358 -2082174 - L1MC4 LINE L1 -695 7347 6746 184 206 0 29 chr5 201003997 201004031 -2081501 + MIR SINE MIR 45 77 -131 210 289 0 0 chr5 201004360 201004412 -2081120 + (TA)n Simple_repeat Simple_repeat 1 52 0 34 24 0 0 chr5 201004947 201004988 -2080544 + AT_rich Low_complexity Low_complexity 1 41 0 201 162 0 0 chr5 201005033 201005070 -2080462 + T-rich Low_complexity Low_complexity 5 41 0 3606 102 11 15 chr5 201005252 201005773 -2079759 + MER4D LTR ERV1 3 521 -351 2210 92 7 0 chr5 201005892 201006185 -2079347 - AluY SINE Alu -16 295 1 1026 122 26 63 chr5 201006185 201006374 -2079158 + MER4D LTR ERV1 547 728 -175 2536 49 0 3 chr5 201006551 201006855 -2078677 - AluY SINE Alu -8 303 1 1052 166 6 0 chr5 201006859 201007022 -2078510 - FRAM SINE Alu -2 164 1 1837 141 117 12 chr5 201007040 201007366 -2078166 - MER4B LTR ERV1 -250 360 1 1583 194 26 24 chr5 201007366 201007705 -2077827 + MLT1B LTR MaLR 51 390 0 1846 244 31 16 chr5 201008222 201008672 -2076860 - L1MDb LINE L1 -5609 461 5 189 74 0 0 chr5 201008700 201008727 -2076805 + (A)n Simple_repeat Simple_repeat 1 27 0 2474 78 0 10 chr5 201008944 201009253 -2076279 + AluY SINE Alu 1 306 -5 23 0 0 0 chr5 201009414 201009437 -2076095 + AT_rich Low_complexity Low_complexity 1 23 0 1679 129 0 0 chr5 201009543 201009775 -2075757 + AluSg/x SINE Alu 69 300 -10 733 235 50 5 chr5 201009779 201009979 -2075553 - MER34B LTR ERV1 -82 483 275 2816 114 41 41 chr5 201010019 201010484 -2075048 - MER4C LTR ERV1 0 465 1 482 96 4 50 chr5 201010571 201010670 -2074862 - MER34C LTR ERV1 -479 100 1 1607 170 13 13 chr5 201010672 201010978 -2074554 - L1MC3 LINE L1 -138 7647 7342 1332 70 0 0 chr5 201011294 201011452 -2074080 - AluSg SINE Alu -108 202 45 283 236 0 0 chr5 201011760 201011815 -2073717 - MIR SINE MIR -33 229 175 848 219 69 71 chr5 201011914 201012304 -2073228 - MER74A LTR ERVL -85 473 85 255 103 26 0 chr5 201012304 201012343 -2073189 + AluSg1 SINE Alu 1 40 -262 422 77 0 0 chr5 201012572 201012624 -2072908 + AluSg1 SINE Alu 2 53 -257 339 250 10 20 chr5 201012754 201012854 -2072678 + L1MEc LINE L1 49 147 -6249 881 297 4 0 chr5 201012899 201013165 -2072367 + L1MEc LINE L1 248 514 -5882 1658 181 13 17 chr5 201013465 201013763 -2071769 + AluJb SINE Alu 1 297 -15 26 0 0 0 chr5 201014023 201014049 -2071483 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 201014491 201014519 -2071013 + AT_rich Low_complexity Low_complexity 1 28 0 1917 111 0 28 chr5 201014651 201014939 -2070593 + AluSg1 SINE Alu 30 309 0 384 211 21 28 chr5 201014940 201015048 -2070484 + L1MC4 LINE L1 7476 7676 -319 450 221 171 83 chr5 201015840 201016306 -2069226 + MLT1G3 LTR MaLR 1 537 -5 2156 121 7 7 chr5 201016362 201016668 -2068864 - AluSc SINE Alu -3 306 1 689 174 33 8 chr5 201016773 201016894 -2068638 - FLAM_A SINE Alu -5 128 5 464 258 113 11 chr5 201016894 201017080 -2068452 - L1ME3 LINE L1 -304 5858 5654 2017 71 36 14 chr5 201017219 201017499 -2068033 + AluY SINE Alu 13 298 -13 578 263 77 34 chr5 201017526 201017735 -2067797 + L1MEc LINE L1 41 258 -6138 1122 127 12 6 chr5 201017833 201018006 -2067526 - AluSg/x SINE Alu -5 307 134 2021 108 11 4 chr5 201018006 201018284 -2067248 - AluSq SINE Alu -5 308 29 1448 184 6 75 chr5 201018284 201018559 -2066973 + L1ME LINE L1 5042 5291 -875 2124 133 17 0 chr5 201018559 201018860 -2066672 - AluSx SINE Alu -6 306 1 1448 184 6 75 chr5 201018860 201019015 -2066517 + L1ME LINE L1 5291 5455 -711 475 186 34 59 chr5 201019016 201019134 -2066398 + MLT1D LTR MaLR 1 115 -390 2831 201 60 46 chr5 201019151 201019655 -2065877 + L1MC3 LINE L1 6519 7014 -771 324 0 0 0 chr5 201019655 201019691 -2065841 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 2831 201 60 46 chr5 201019691 201019729 -2065803 + L1MC3 LINE L1 7014 7050 -735 2031 108 14 0 chr5 201019729 201020031 -2065501 + AluSx SINE Alu 1 306 0 2831 201 60 46 chr5 201020031 201020202 -2065330 + L1MC3 LINE L1 7050 7244 -541 295 299 115 5 chr5 201020308 201020521 -2065011 - L1ME3 LINE L1 -670 5492 5259 1925 134 24 3 chr5 201020825 201021116 -2064416 - AluSx SINE Alu -15 297 1 371 264 99 10 chr5 201021228 201021495 -2064037 - L1 LINE L1 -2375 3771 3476 2295 75 0 39 chr5 201021725 201022031 -2063501 - AluY SINE Alu -17 294 1 2213 112 0 0 chr5 201023443 201023737 -2061795 + AluSc SINE Alu 1 294 -15 480 296 120 22 chr5 201023737 201024095 -2061437 + L1M4 LINE L1 2186 2578 -3568 2291 88 14 0 chr5 201024118 201024415 -2061117 + AluSp SINE Alu 1 301 -12 1956 169 0 6 chr5 201024421 201024765 -2060767 + AluJo SINE Alu 1 342 0 2553 54 0 0 chr5 201024767 201025063 -2060469 + AluY SINE Alu 1 296 -15 829 250 126 109 chr5 201025176 201025819 -2059713 + L1M4 LINE L1 4673 5326 -820 458 273 44 62 chr5 201026440 201026667 -2058865 + MLT1J LTR MaLR 99 321 -190 2162 102 20 10 chr5 201026977 201027146 -2058386 - AluY SINE Alu -14 297 122 189 0 0 0 chr5 201027146 201027167 -2058365 + (TG)n Simple_repeat Simple_repeat 2 22 0 2162 102 20 10 chr5 201027167 201027291 -2058241 - AluY SINE Alu -189 122 1 207 341 121 18 chr5 201027512 201027785 -2057747 + L2 LINE L2 2291 2591 -723 1806 185 0 13 chr5 201027956 201028259 -2057273 - AluJo SINE Alu -13 299 1 2266 85 0 3 chr5 201028475 201028785 -2056747 + AluY SINE Alu 1 309 0 317 309 105 31 chr5 201029015 201029177 -2056355 - MIR3 SINE MIR -3 205 32 1866 222 121 74 chr5 201029455 201030159 -2055373 - MER21B LTR ERV1 -81 782 46 309 262 71 0 chr5 201030191 201030275 -2055257 - MER21B LTR ERV1 -773 90 1 3208 128 24 26 chr5 201030336 201030827 -2054705 - LTR2B LTR ERV1 0 490 1 5133 86 0 8 chr5 201030827 201031494 -2054038 - Harlequin LTR ERV1 0 6896 6235 2376 85 0 0 chr5 201031617 201031922 -2053610 - AluY SINE Alu -6 305 1 229 143 20 20 chr5 201031992 201032041 -2053491 + MER34B LTR ERV1 331 379 -186 685 190 128 11 chr5 201032053 201032232 -2053300 + LTR37A LTR ERV1 209 408 -18 252 211 120 114 chr5 201032481 201032656 -2052876 - HAL1 LINE L1 -2 2505 2330 194 262 71 36 chr5 201032784 201032868 -2052664 + MIR SINE MIR 120 206 -56 181 288 0 91 chr5 201032788 201032920 -2052612 - L2 LINE L2 -1607 1707 1588 * 1923 172 30 22 chr5 201032923 201033338 -2052194 + LTR27 LTR ERV1 110 501 0 191 259 74 0 chr5 201033338 201033392 -2052140 + MIR SINE MIR 204 261 -1 469 258 14 7 chr5 201033534 201033704 -2051828 - L1ME3A LINE L1 -260 5902 5731 1741 125 34 55 chr5 201033803 201034073 -2051459 - MER4A LTR ERV1 0 664 343 2015 141 13 0 chr5 201034073 201034378 -2051154 - AluSx SINE Alu -3 309 1 1741 125 34 55 chr5 201034378 201034460 -2051072 - MER4A LTR ERV1 -321 343 261 2128 137 3 0 chr5 201035750 201036057 -2049475 + AluSx SINE Alu 3 310 -2 206 169 34 34 chr5 201036128 201036187 -2049345 + A-rich Low_complexity Low_complexity 3 61 0 324 384 54 0 chr5 201037097 201037321 -2048211 + L1MEd LINE L1 112 347 -5772 427 320 20 0 chr5 201037321 201037468 -2048064 + MER91A DNA MER1_type 2 151 -45 261 185 92 46 chr5 201037553 201037618 -2047914 + Alu SINE Alu 56 123 -177 1232 286 62 36 chr5 201038486 201039610 -2045922 - L1ME3A LINE L1 -712 5450 4299 1913 214 14 64 chr5 201039637 201040138 -2045394 + MLT2B1 LTR ERVL 5 480 -40 556 14 14 14 chr5 201040172 201040246 -2045286 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 1100 267 169 21 chr5 201040281 201040842 -2044690 - L1ME3A LINE L1 -1922 4224 3581 238 238 200 9 chr5 201041469 201041574 -2043958 + L2 LINE L2 2925 3049 -264 652 148 0 17 chr5 201041583 201041698 -2043834 + L1MB4 LINE L1 4924 5036 -1110 2924 160 92 7 chr5 201041727 201042291 -2043241 + ERVL LTR ERVL 5153 5764 0 1770 80 0 4 chr5 201042518 201042757 -2042775 + LTR19B LTR ERV1 1 238 -342 936 123 65 0 chr5 201042754 201042909 -2042623 + LTR19B LTR ERV1 416 580 0 * 319 77 26 39 chr5 201043072 201043143 -2042389 + (TA)n Simple_repeat Simple_repeat 1 72 -5 2414 79 0 13 chr5 201043143 201043448 -2042084 - AluY SINE Alu -10 301 1 319 77 26 39 chr5 201043448 201043454 -2042078 + (TA)n Simple_repeat Simple_repeat 72 77 0 319 86 0 103 chr5 201044477 201044535 -2040997 + L1ME1 LINE L1 5912 5963 -203 * 2350 143 33 0 chr5 201044523 201044975 -2040557 + L1MB4 LINE L1 5657 6171 -9 3969 89 18 4 chr5 201045085 201045589 -2039943 - MER9 LTR ERVK 0 511 1 1065 266 92 32 chr5 201045775 201046067 -2039465 + L1MC4 LINE L1 6905 7178 -817 2214 121 0 3 chr5 201046067 201046374 -2039158 - AluSp SINE Alu -7 306 1 1065 266 92 32 chr5 201046374 201046443 -2039089 + L1MC4 LINE L1 7178 7241 -754 1650 175 29 0 chr5 201046443 201046723 -2038809 - AluJo SINE Alu -24 288 1 1065 266 92 32 chr5 201046723 201046974 -2038558 + L1MC4 LINE L1 7241 7575 -420 1987 136 0 28 chr5 201046974 201047291 -2038241 + AluSg1 SINE Alu 1 308 -1 1065 266 92 32 chr5 201047291 201047400 -2038132 + L1MC4 LINE L1 7575 7676 -319 3990 234 82 75 chr5 201047607 201049365 -2036167 - L1M4 LINE L1 -906 5738 3963 2518 81 0 0 chr5 201049365 201049672 -2035860 - AluY SINE Alu -4 307 1 3990 234 82 75 chr5 201049672 201049859 -2035673 - L1M4 LINE L1 -2681 3963 3779 374 264 19 38 chr5 201049829 201049935 -2035597 - L1M4 LINE L1 -6086 456 353 * 358 352 31 5 chr5 201049948 201050141 -2035391 - L1MEc LINE L1 -4023 2373 2176 2384 46 0 4 chr5 201050243 201050524 -2035008 + AluY SINE Alu 5 284 -27 254 0 54 0 chr5 201050524 201050561 -2034971 + (TAAAA)n Simple_repeat Simple_repeat 2 180 0 1176 267 102 17 chr5 201050678 201051396 -2034136 - L1ME3 LINE L1 -209 5953 5175 454 268 61 45 chr5 201051473 201051642 -2033890 - L1ME3 LINE L1 -947 5199 5021 2070 148 125 10 chr5 201051642 201052026 -2033506 + MSTA LTR MaLR 1 428 0 454 268 61 45 chr5 201052026 201052166 -2033366 - L1ME3 LINE L1 -1125 5021 4885 378 0 0 0 chr5 201052209 201052251 -2033281 + (TG)n Simple_repeat Simple_repeat 2 43 0 304 248 105 19 chr5 201052578 201052658 -2032874 + MER58B DNA MER1_type 217 309 -2111 1312 211 181 28 chr5 201052658 201053090 -2032442 - MLT1D LTR MaLR -3 502 5 304 248 105 19 chr5 201053090 201053114 -2032418 + MER58B DNA MER1_type 309 330 -11 909 163 11 49 chr5 201053116 201053300 -2032232 + AluJb SINE Alu 134 310 -2 2004 240 88 44 chr5 201053881 201054450 -2031082 - HAL1 LINE L1 -585 1922 1307 1814 128 3 80 chr5 201054450 201054787 -2030745 + AluSq SINE Alu 3 313 0 2004 240 88 44 chr5 201054787 201055012 -2030520 - HAL1 LINE L1 -1200 1307 1093 270 335 18 0 chr5 201055019 201055046 -2030486 - L1MA10 LINE L1 -2 6332 6306 2162 231 44 38 chr5 201055046 201055679 -2029853 - L1ME1 LINE L1 -21 6214 5578 2023 248 83 22 chr5 201055672 201056577 -2028955 - L1ME1 LINE L1 -1994 4221 92 * 538 240 125 48 chr5 201056588 201056900 -2028632 - HAL1 LINE L1 -1400 1107 772 195 42 0 0 chr5 201056986 201057010 -2028522 + (A)n Simple_repeat Simple_repeat 1 24 0 1225 75 0 0 chr5 201057128 201057344 -2028188 - AluY SINE Alu 0 311 133 2369 78 0 0 chr5 201057344 201057653 -2027879 - AluSc SINE Alu 0 309 1 1878 77 0 0 chr5 201057869 201058116 -2027416 - AluY SINE Alu 0 311 65 1914 245 87 4 chr5 201058613 201059143 -2026389 - L1ME3A LINE L1 -36 6134 5561 2425 42 6 6 chr5 201059469 201059780 -2025752 - AluY SINE Alu 0 311 1 1049 75 0 0 chr5 201059780 201059914 -2025618 - AluY SINE Alu -177 134 1 1258 155 3 134 chr5 201059914 201060249 -2025283 - AluJb SINE Alu -10 292 2 309 244 44 22 chr5 201060417 201060507 -2025025 - HAL1 LINE L1 -922 1585 1494 1056 105 25 0 chr5 201060661 201060823 -2024709 - AluSg/x SINE Alu -13 299 134 377 279 30 133 chr5 201060965 201061266 -2024266 - HAL1 LINE L1 -1040 1467 1198 36 0 0 0 chr5 201061485 201061521 -2024011 + AT_rich Low_complexity Low_complexity 1 36 0 811 183 102 61 chr5 201061536 201061782 -2023750 - L1M3 LINE L1 -542 5641 5386 221 328 0 0 chr5 201061982 201062049 -2023483 - L2 LINE L2 -12 3260 3194 2007 96 4 4 chr5 201062187 201062495 -2023037 - AluSg SINE Alu 0 308 1 1553 136 115 14 chr5 201064292 201064571 -2020961 - AluSg SINE Alu -3 307 1 1190 88 5 49 chr5 201064747 201064952 -2020580 + AluSg/x SINE Alu 112 307 -3 1728 155 44 0 chr5 201066305 201066602 -2018930 - AluJo SINE Alu -2 310 1 1807 143 3 51 chr5 201067687 201068002 -2017530 + AluSx SINE Alu 1 300 -12 1666 189 76 12 chr5 201068049 201068392 -2017140 - MLT1A1 LTR MaLR 0 365 1 226 210 140 0 chr5 201068851 201068915 -2016617 + MIR SINE MIR 41 114 -94 1032 245 113 56 chr5 201069123 201069584 -2015948 - L2 LINE L2 0 3313 2827 1278 126 5 15 chr5 201069670 201069869 -2015663 - MLT2C1 LTR ERVL -199 198 2 540 209 61 68 chr5 201069871 201070034 -2015498 - L2 LINE L2 -483 2831 2670 1757 108 100 0 chr5 201070277 201070546 -2014986 - AluSx SINE Alu -16 296 1 295 313 76 108 chr5 201070663 201070912 -2014620 + MIR SINE MIR 8 248 -14 773 85 9 0 chr5 201070955 201071061 -2014471 + AluY SINE Alu 2 108 -203 1712 164 0 27 chr5 201071316 201071615 -2013917 - AluJo SINE Alu -21 291 1 2132 81 7 3 chr5 201071625 201071908 -2013624 - AluSx SINE Alu -8 304 21 1171 282 128 40 chr5 201071932 201072432 -2013100 + MLT1G1 LTR MaLR 1 544 -51 1843 227 130 10 chr5 201072513 201073352 -2012180 + L1MEc LINE L1 1242 2071 -4144 * 3298 184 50 36 chr5 201073347 201073777 -2011755 + L1MC3 LINE L1 6992 7439 -346 2024 133 7 0 chr5 201073777 201074085 -2011447 + AluSx SINE Alu 1 310 -2 3298 184 50 36 chr5 201074085 201074437 -2011095 + L1MC3 LINE L1 7439 7785 0 2246 59 7 0 chr5 201074778 201075067 -2010465 + AluY SINE Alu 1 291 -20 812 208 6 22 chr5 201075079 201075262 -2010270 + FRAM SINE Alu 1 176 0 257 294 0 0 chr5 201075616 201075684 -2009848 - MIR SINE MIR 0 262 195 537 167 174 14 chr5 201075734 201075872 -2009660 + MIR SINE MIR 77 236 -26 1653 155 17 21 chr5 201075924 201076215 -2009317 - AluJo SINE Alu -22 290 1 470 303 97 0 chr5 201076226 201076391 -2009141 - MIR SINE MIR -76 186 6 372 231 98 67 chr5 201077813 201078038 -2007494 + MER74A LTR ERVL 297 528 -30 258 188 58 43 chr5 201078440 201078509 -2007023 - MIR3 SINE MIR -54 154 85 4797 153 27 4 chr5 201079430 201080273 -2005259 - L1MA4A LINE L1 -5 6298 5436 1744 169 14 20 chr5 201080275 201080623 -2004909 + L1 LINE L1 4747 5092 -1054 1346 106 0 0 chr5 201080730 201080909 -2004623 - AluSc SINE Alu -130 179 1 320 247 34 11 chr5 201081246 201081335 -2004197 + L1MC4 LINE L1 6613 6703 -1339 205 209 0 23 chr5 201081336 201081379 -2004153 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 232 233 68 0 chr5 201081387 201081460 -2004072 - L1ME LINE L1 -301 5865 5788 483 276 0 43 chr5 201081462 201081625 -2003907 - L2 LINE L2 0 3313 3158 1902 187 84 75 chr5 201081636 201082206 -2003326 + LTR49 LTR ERV1 1 564 -31 857 275 96 7 chr5 201082225 201082606 -2002926 - L2 LINE L2 -178 3135 2722 1037 201 62 23 chr5 201082607 201082866 -2002666 + MER31B LTR ERV1 6 274 -192 1838 216 32 78 chr5 201082866 201083389 -2002143 + LTR26B LTR ERV1 1 499 -32 8456 202 17 3 chr5 201083412 201084904 -2000628 + HERVE LTR ERV1 1887 3399 -4414 1056 186 73 23 chr5 201084922 201085142 -2000390 - HERVE LTR ERV1 -5174 2639 2409 * 17061 174 6 13 chr5 201085124 201087925 -1997607 + HERVE LTR ERV1 3395 6177 -1636 2410 211 4 4 chr5 201087914 201088403 -1997129 - HERVE LTR ERV1 -1172 5724 5236 * 760 107 0 0 chr5 201088400 201088512 -1997020 + Harlequin LTR ERV1 5809 5920 -976 * 1270 70 0 0 chr5 201088813 201088971 -1996561 + AluSg SINE Alu 45 202 -108 324 0 0 0 chr5 201091387 201091423 -1994109 + (TG)n Simple_repeat Simple_repeat 1 36 0 2209 106 0 3 chr5 201091490 201091801 -1993731 + AluSg SINE Alu 1 310 0 2350 68 0 13 chr5 201093072 201093380 -1992152 - AluY SINE Alu -7 304 1 2470 48 0 0 chr5 201095109 201095403 -1990129 + AluY SINE Alu 1 294 -17 620 151 0 0 chr5 201095835 201095921 -1989611 - MER75 DNA T2_type -427 87 2 262 309 89 8 chr5 201096232 201096355 -1989177 + L1ME LINE L1 864 996 -5935 295 287 79 9 chr5 201096808 201097108 -1988424 + L1ME LINE L1 1376 1468 -4955 573 262 108 28 chr5 201097156 201097480 -1988052 + L1ME LINE L1 2043 2392 -4549 1075 303 84 36 chr5 201099385 201100273 -1985259 - L2 LINE L2 0 3313 2384 244 299 46 0 chr5 201100273 201100360 -1985172 - L1ME LINE L1 -421 5700 5610 236 295 132 12 chr5 201100389 201100708 -1984824 - L1ME4a LINE L1 0 6121 5765 28 0 0 0 chr5 201101513 201101541 -1983991 + AT_rich Low_complexity Low_complexity 1 28 0 282 296 28 77 chr5 201101771 201102031 -1983501 + HAL1b LINE L1 311 488 -860 265 224 78 106 chr5 201102422 201102601 -1982931 - L1MC4 LINE L1 -3 8039 7866 182 279 115 0 chr5 201103908 201103969 -1981563 - L3 LINE CR1 -5 1572 1505 1830 154 10 36 chr5 201104352 201104658 -1980874 + AluJo SINE Alu 1 298 -14 22 0 0 0 chr5 201104801 201104823 -1980709 + AT_rich Low_complexity Low_complexity 1 22 0 329 256 60 0 chr5 201104866 201104983 -1980549 - L1ME LINE L1 -311 5810 5687 1950 120 38 3 chr5 201107334 201107625 -1977907 + AluJb SINE Alu 1 301 -11 201 336 53 9 chr5 201109142 201109255 -1976277 - L2 LINE L2 -5 3308 3191 1444 196 38 7 chr5 201109271 201109562 -1975970 + MLT1D LTR MaLR 206 505 0 527 277 53 32 chr5 201109567 201109816 -1975716 + L1MC4a LINE L1 5725 5988 -133 219 69 0 0 chr5 201109971 201110000 -1975532 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1192 102 0 0 chr5 201110004 201110151 -1975381 - AluSc SINE Alu -20 289 143 2251 92 7 13 chr5 201110156 201110459 -1975073 - AluY SINE Alu -10 301 1 349 278 94 17 chr5 201110461 201110641 -1974891 - L1ME LINE L1 -4273 1988 1795 936 113 0 0 chr5 201111007 201111140 -1974392 + AluSq/x SINE Alu 1 133 -179 2297 91 3 3 chr5 201111154 201111463 -1974069 + AluSc SINE Alu 1 309 0 1701 155 76 3 chr5 201111478 201111769 -1973763 + AluSx SINE Alu 1 312 0 1351 272 60 31 chr5 201111953 201112438 -1973094 - L1ME LINE L1 -4486 1775 1277 998 158 28 153 chr5 201112444 201112804 -1972728 + MER33 DNA MER1_type 10 324 0 3100 245 70 40 chr5 201112808 201114012 -1971520 - L1ME LINE L1 -4849 1231 5 189 74 0 0 chr5 201114040 201114067 -1971465 + (A)n Simple_repeat Simple_repeat 1 27 0 2241 110 0 10 chr5 201114285 201114594 -1970938 + AluY SINE Alu 1 306 -5 281 279 106 71 chr5 201114787 201115070 -1970462 - LTR67 LTR ERVL -13 544 252 2033 145 7 3 chr5 201115094 201115404 -1970128 - MER1B DNA MER1_type 0 339 29 208 313 130 8 chr5 201117590 201117721 -1967811 + MIR SINE MIR 1 147 -115 2181 135 0 0 chr5 201117739 201118042 -1967490 + AluSx SINE Alu 3 305 -7 2633 143 44 7 chr5 201118127 201118539 -1966993 + MSTA LTR MaLR 2 428 0 9431 166 43 8 chr5 201118539 201120134 -1965398 + MSTA-int LTR MaLR 1 1651 0 2668 143 14 45 chr5 201120139 201120521 -1965011 + MSTA LTR MaLR 1 369 -59 2029 118 30 16 chr5 201120521 201120645 -1964887 + AluSq SINE Alu 1 122 -191 441 0 0 0 chr5 201120645 201120694 -1964838 + (CA)n Simple_repeat Simple_repeat 2 50 0 2029 118 30 16 chr5 201120694 201120873 -1964659 + AluSq SINE Alu 122 308 -5 2668 143 14 45 chr5 201120873 201120932 -1964600 + MSTA LTR MaLR 369 428 0 2306 80 0 7 chr5 201121540 201121839 -1963693 + AluY SINE Alu 1 297 -14 25 0 0 0 chr5 201122077 201122102 -1963430 + AT_rich Low_complexity Low_complexity 1 25 0 914 309 56 25 chr5 201122121 201122211 -1963321 + L1ME3A LINE L1 5106 5192 -978 1797 175 3 10 chr5 201122211 201122525 -1963007 + AluJb SINE Alu 1 312 0 914 309 56 25 chr5 201122525 201123158 -1962374 + L1ME3A LINE L1 5192 5856 -314 300 184 211 0 chr5 201123171 201123247 -1962285 + L1MC4 LINE L1 6612 6703 -1339 374 195 16 106 chr5 201123352 201123475 -1962057 + L1ME3A LINE L1 5963 6074 -96 1929 123 3 31 chr5 201123487 201123800 -1961732 - AluSq SINE Alu 0 305 1 490 203 134 96 chr5 201123892 201123965 -1961567 + MIR SINE MIR 27 96 -166 2433 71 0 0 chr5 201123965 201124261 -1961271 - AluY SINE Alu -10 301 6 490 203 134 96 chr5 201124261 201124374 -1961158 + MIR SINE MIR 96 220 -42 21 57 0 0 chr5 201124813 201124848 -1960684 + AT_rich Low_complexity Low_complexity 1 35 0 2043 144 19 3 chr5 201124908 201125227 -1960305 + L1MB3 LINE L1 5846 6169 -14 337 211 296 0 chr5 201125292 201125434 -1960098 + L1M4 LINE L1 2835 3018 -3128 340 228 59 20 chr5 201126339 201126440 -1959092 + L1M4 LINE L1 3009 3113 -3033 286 288 114 26 chr5 201126424 201126626 -1958906 + L1MDa LINE L1 1 608 -5922 * 2635 212 87 69 chr5 201127273 201127706 -1957826 + L1MDa LINE L1 910 1334 -5206 2377 98 0 0 chr5 201127706 201128002 -1957530 - AluSg SINE Alu -14 296 1 2635 212 87 69 chr5 201128002 201128378 -1957154 + L1MDa LINE L1 1334 1711 -4829 1870 155 7 16 chr5 201128378 201128681 -1956851 - AluSx SINE Alu -12 300 1 2635 212 87 69 chr5 201128681 201128960 -1956572 + L1MDa LINE L1 1711 1984 -4556 264 254 136 30 chr5 201129023 201129192 -1956340 + L1M4 LINE L1 3770 3956 -2190 257 361 0 23 chr5 201129989 201130119 -1955413 + L2 LINE L2 2588 2714 -600 * 1068 283 115 11 chr5 201130116 201130491 -1955041 - L2 LINE L2 -2 3311 2898 684 291 108 32 chr5 201130709 201130730 -1954802 - Tigger8 DNA MER2_type -18 648 630 2349 105 0 0 chr5 201130730 201131026 -1954506 - AluSx SINE Alu -16 296 1 684 291 108 32 chr5 201131026 201131437 -1954095 - Tigger8 DNA MER2_type -36 630 183 215 295 74 16 chr5 201131586 201131708 -1953824 + MIR SINE MIR 94 222 -40 1298 111 79 0 chr5 201132507 201132696 -1952836 + AluSc SINE Alu 106 309 0 258 259 93 46 chr5 201132856 201133072 -1952460 + HAL1 LINE L1 913 1138 -1369 689 221 164 99 chr5 201133092 201133477 -1952055 + L2 LINE L2 2900 3309 -4 279 267 33 22 chr5 201133602 201133692 -1951840 + L1ME LINE L1 5569 5659 -462 2640 61 0 0 chr5 201133856 201134167 -1951365 + AluY SINE Alu 1 311 0 280 266 13 0 chr5 201134677 201134756 -1950776 - MIR SINE MIR -8 254 175 588 214 21 29 chr5 201135692 201135832 -1949700 - LTR53 LTR ERVL 0 519 381 2124 123 10 0 chr5 201135849 201136158 -1949374 - AluSx SINE Alu 0 312 1 898 182 19 0 chr5 201136407 201136561 -1948971 - Tigger2 DNA MER2_type 0 2718 2562 862 141 91 70 chr5 201136557 201136785 -1948747 - Tigger2 DNA MER2_type -258 2460 1 * 21 82 0 0 chr5 201136940 201136989 -1948543 + AT_rich Low_complexity Low_complexity 1 49 0 3221 95 4 202 chr5 201138517 201139275 -1946257 - LTR14B LTR ERVK 0 608 1 2365 88 3 0 chr5 201139650 201139944 -1945588 - AluY SINE Alu -16 295 1 180 0 0 0 chr5 201140469 201140489 -1945043 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 243 173 37 0 chr5 201140729 201140810 -1944722 + (TA)n Simple_repeat Simple_repeat 2 85 0 25 31 0 0 chr5 201141210 201141242 -1944290 + AT_rich Low_complexity Low_complexity 1 32 0 2206 128 0 6 chr5 201141253 201141566 -1943966 + AluSx SINE Alu 1 311 -1 1866 173 0 10 chr5 201142056 201142369 -1943163 + AluJb SINE Alu 1 310 -2 260 269 101 63 chr5 201142754 201142992 -1942540 + L1ME1 LINE L1 4377 4623 -1523 2273 96 3 3 chr5 201143110 201143413 -1942119 + AluSg SINE Alu 1 303 -7 38 68 0 0 chr5 201143489 201143562 -1941970 + AT_rich Low_complexity Low_complexity 1 73 0 229 188 47 47 chr5 201143796 201143860 -1941672 - L1PA15-16 LINE L1 -6570 279 216 466 265 158 22 chr5 201143962 201144091 -1941441 + L1ME1 LINE L1 4946 5056 -1090 2217 96 0 69 chr5 201144091 201144423 -1941109 - AluSc SINE Alu 0 309 1 466 265 158 22 chr5 201144423 201144648 -1940884 + L1ME1 LINE L1 5056 5348 -798 26 30 0 0 chr5 201144765 201144798 -1940734 + AT_rich Low_complexity Low_complexity 1 33 0 371 241 188 8 chr5 201145119 201145252 -1940280 + L1MC4a LINE L1 5742 5898 -1910 1865 186 117 53 chr5 201145495 201145984 -1939548 + L1MC4 LINE L1 7477 8004 -38 2071 98 0 4 chr5 201145984 201146259 -1939273 - AluSx SINE Alu -38 274 1 1865 186 117 53 chr5 201146259 201146300 -1939232 + L1MC4 LINE L1 8004 8041 -1 1377 214 33 37 chr5 201146391 201146797 -1938735 + MLT1C LTR MaLR 11 467 0 2052 221 100 4 chr5 201146797 201147295 -1938237 + L1ME1 LINE L1 5489 6034 -132 512 236 48 36 chr5 201147765 201147950 -1937582 + L1ME2 LINE L1 5986 6332 -2 229 359 8 17 chr5 201148675 201148792 -1936740 - MIR SINE MIR 0 262 147 345 358 7 20 chr5 201148814 201148965 -1936567 - MIR SINE MIR -79 183 35 2126 116 17 0 chr5 201149825 201150117 -1935415 + AluSx SINE Alu 1 297 -15 378 327 0 39 chr5 201150251 201150404 -1935128 - L2 LINE L2 -4 3309 3163 389 273 159 1 chr5 201150794 201151062 -1934470 + L1ME LINE L1 5414 5729 -392 2015 119 11 11 chr5 201152404 201152689 -1932843 + AluSq SINE Alu 13 297 -16 335 253 23 11 chr5 201152693 201152780 -1932752 + L1M4 LINE L1 2416 2503 -3643 865 167 7 0 chr5 201152790 201152928 -1932604 - FLAM_C SINE Alu -4 139 1 270 292 82 34 chr5 201152931 201153198 -1932334 + L1M4 LINE L1 2540 2819 -3327 242 220 0 20 chr5 201153291 201153341 -1932191 + HAL1 LINE L1 12 60 -2447 361 214 0 0 chr5 201153517 201153587 -1931945 + AluJb SINE Alu 58 127 -175 1856 165 9 6 chr5 201153587 201153914 -1931618 + Tigger2 DNA MER2_type 1266 1593 -1125 294 170 96 21 chr5 201153915 201154009 -1931523 + L1M4 LINE L1 2336 2436 -3710 828 167 0 14 chr5 201154021 201154159 -1931373 - AluJo SINE Alu -176 136 1 1947 100 63 0 chr5 201154159 201154452 -1931080 - AluSq SINE Alu 0 310 1 1710 165 32 4 chr5 201154620 201154899 -1930633 - AluSx SINE Alu -25 287 1 561 247 58 45 chr5 201154899 201155122 -1930410 - L1M3c LINE L1 -5008 893 668 744 321 64 23 chr5 201155240 201155646 -1929886 - L1M3c LINE L1 -5205 686 2 2480 220 125 29 chr5 201155649 201155780 -1929752 - L1MDa LINE L1 -4658 1882 1765 2441 82 7 0 chr5 201155780 201156085 -1929447 - AluY SINE Alu -4 307 1 2480 220 125 29 chr5 201156085 201156500 -1929032 - L1MDa LINE L1 -4775 1765 1391 2404 107 3 0 chr5 201156500 201156808 -1928724 - AluSg SINE Alu -1 309 1 2480 220 125 29 chr5 201156808 201157791 -1927741 - L1MDa LINE L1 -5149 1391 113 1442 179 58 24 chr5 201157791 201158082 -1927450 + AluJb SINE Alu 1 301 -11 2480 220 125 29 chr5 201158082 201158179 -1927353 - L1MDa LINE L1 -6427 113 27 21 57 0 0 chr5 201158568 201158603 -1926929 + AT_rich Low_complexity Low_complexity 1 35 0 185 352 14 0 chr5 201159139 201159210 -1926322 + L2 LINE L2 2866 2937 -335 680 247 43 0 chr5 201159384 201159615 -1925917 + L1M4 LINE L1 3780 4020 -2126 1003 373 10 79 chr5 201159652 201159955 -1925577 - AluJb SINE Alu -30 282 1 735 236 94 0 chr5 201159993 201160268 -1925264 + L1M4 LINE L1 4098 4398 -1748 280 327 136 13 chr5 201160880 201161278 -1924254 + L2 LINE L2 1811 2257 -1057 1253 79 0 6 chr5 201162694 201162859 -1922673 - U1 snRNA snRNA -1 164 1 2106 103 55 3 chr5 201163818 201164108 -1921424 + AluY SINE Alu 1 305 -6 323 307 24 8 chr5 201164108 201164235 -1921297 - MIR SINE MIR -129 133 5 961 242 58 36 chr5 201164293 201164657 -1920875 + MLT1B LTR MaLR 4 375 -15 237 319 133 0 chr5 201166177 201166447 -1919085 + L2 LINE L2 1977 2282 -1032 445 183 39 61 chr5 201167770 201167950 -1917582 + (CAGAGA)n Simple_repeat Simple_repeat 5 180 0 25 0 0 0 chr5 201168692 201168717 -1916815 + GC_rich Low_complexity Low_complexity 1 25 0 231 296 70 7 chr5 201169269 201169411 -1916121 - MER91A DNA MER1_type -45 151 1 205 192 0 55 chr5 201170562 201170635 -1914897 + CT-rich Low_complexity Low_complexity 2 70 0 226 288 0 0 chr5 201171083 201171142 -1914390 - MER91A DNA MER1_type -137 59 1 447 336 62 35 chr5 201173520 201173776 -1911756 - MLT1L LTR MaLR -44 571 309 216 184 61 0 chr5 201174243 201174292 -1911240 + G-rich Low_complexity Low_complexity 2 53 0 3458 193 41 12 chr5 201175346 201175437 -1910095 - L1MB3 LINE L1 -2 6181 6094 2303 116 0 0 chr5 201175437 201175740 -1909792 + AluSx SINE Alu 3 305 -7 3458 193 41 12 chr5 201175740 201176411 -1909121 - L1MB3 LINE L1 -89 6094 5397 2032 158 0 0 chr5 201177433 201177731 -1907801 + AluJo SINE Alu 1 298 -14 2484 67 0 0 chr5 201177772 201178071 -1907461 - AluY SINE Alu -10 301 3 723 307 97 29 chr5 201178454 201178865 -1906667 + HAL1 LINE L1 2068 2506 -1 562 279 104 25 chr5 201178867 201179068 -1906464 + L1ME2 LINE L1 3070 3286 -2860 213 167 309 0 chr5 201179068 201179152 -1906380 - L2 LINE L2 0 3313 3204 728 302 73 44 chr5 201179160 201179465 -1906067 + L1ME2 LINE L1 5078 5373 -791 2613 30 0 0 chr5 201179465 201179760 -1905772 + AluYa5 SINE Alu 6 300 -11 728 302 73 44 chr5 201179760 201180218 -1905314 + L1ME2 LINE L1 5373 5864 -300 2317 92 7 3 chr5 201180639 201180943 -1904589 + AluSq SINE Alu 1 305 -8 183 305 111 58 chr5 201181335 201181525 -1904007 + MIR SINE MIR 57 256 -6 861 132 0 0 chr5 201181625 201181754 -1903778 + FLAM_C SINE Alu 2 130 -3 2470 101 0 0 chr5 201181882 201182189 -1903343 + AluSc SINE Alu 1 307 -2 442 192 192 0 chr5 201182375 201182445 -1903087 + AluJo SINE Alu 39 94 -218 2142 124 0 6 chr5 201182445 201182759 -1902773 + AluSx SINE Alu 1 312 0 442 192 192 0 chr5 201182759 201182813 -1902719 + AluJo SINE Alu 94 187 -125 * 525 180 0 0 chr5 201182801 201182890 -1902642 + FRAM SINE Alu 72 160 -16 74 66 0 0 chr5 201182899 201183036 -1902496 + AT_rich Low_complexity Low_complexity 1 137 0 2270 106 0 0 chr5 201183592 201183884 -1901648 + AluSx SINE Alu 11 302 -10 220 317 117 42 chr5 201184213 201184333 -1901199 - L2 LINE L2 -29 3284 3156 186 326 74 0 chr5 201184349 201184444 -1901088 + L3 LINE CR1 1174 1275 -302 450 196 6 11 chr5 201186070 201186249 -1899283 + (CA)n Simple_repeat Simple_repeat 2 179 0 182 233 17 0 chr5 201186281 201186341 -1899191 + (CA)n Simple_repeat Simple_repeat 2 62 0 228 306 0 0 chr5 201186705 201186767 -1898765 + MLT1K LTR MaLR 509 570 -18 187 246 85 85 chr5 201186796 201186914 -1898618 + L2 LINE L2 3189 3306 -7 384 274 122 25 chr5 201187194 201187289 -1898243 - MARNA DNA Mariner -13 573 489 2539 66 0 7 chr5 201187289 201187594 -1897938 - AluY SINE Alu -8 303 1 384 274 122 25 chr5 201187594 201187695 -1897837 - MARNA DNA Mariner -97 489 358 2544 146 34 0 chr5 201187793 201188205 -1897327 + MSTB LTR MaLR 1 426 0 278 229 96 36 chr5 201188241 201188324 -1897208 + MIR SINE MIR 16 103 -105 2338 95 0 7 chr5 201188910 201189216 -1896316 - AluSx SINE Alu -8 304 1 580 307 164 17 chr5 201191373 201191932 -1893600 - L2 LINE L2 -54 3259 2608 294 228 173 68 chr5 201192066 201192108 -1893424 - MIR SINE MIR 0 262 226 2047 118 24 0 chr5 201192108 201192395 -1893137 - AluSp SINE Alu -19 294 1 294 228 173 68 chr5 201192395 201192514 -1893018 - MIR SINE MIR -36 226 84 196 222 0 0 chr5 201193344 201193389 -1892143 + L2 LINE L2 3268 3312 -1 681 187 23 6 chr5 201403747 201403918 -1681614 - Charlie5 DNA MER1_type -27 2585 2412 1869 155 20 10 chr5 201403923 201404226 -1681306 + AluJb SINE Alu 1 306 -6 1213 88 7 0 chr5 201408293 201408441 -1677091 + AluSp SINE Alu 1 149 -164 1870 149 0 37 chr5 201408742 201409037 -1676495 - AluSx SINE Alu -19 293 10 2326 109 3 0 chr5 201409056 201409359 -1676173 - AluSx SINE Alu -8 304 1 2209 101 0 19 chr5 201409393 201409700 -1675832 + AluSx SINE Alu 1 301 -11 2346 84 0 7 chr5 201409804 201410100 -1675432 - AluSc SINE Alu -15 294 1 970 173 27 5 chr5 201411344 201411529 -1674003 + MER5A DNA MER1_type 1 189 0 1611 203 17 0 chr5 201411567 201411857 -1673675 - AluJo SINE Alu -14 298 4 1881 172 7 0 chr5 201411875 201412171 -1673361 - AluJb SINE Alu -14 298 1 2143 112 3 37 chr5 201412201 201412523 -1673009 + AluSp SINE Alu 1 311 -2 315 0 0 0 chr5 201412954 201412989 -1672543 + (CA)n Simple_repeat Simple_repeat 1 35 0 2297 113 3 0 chr5 201413101 201413403 -1672129 + AluSx SINE Alu 1 303 -9 990 46 0 46 chr5 201413444 201413575 -1671957 + AluY SINE Alu 177 301 -10 2512 76 3 0 chr5 201413802 201414106 -1671426 - AluSp SINE Alu -8 305 1 2311 80 23 13 chr5 201414119 201414419 -1671113 - AluY SINE Alu -8 303 1 269 130 0 0 chr5 201414423 201414469 -1671063 - Charlie2 DNA MER1_type -64 2798 2753 24 32 0 0 chr5 201414535 201414566 -1670966 + AT_rich Low_complexity Low_complexity 1 31 0 884 205 71 132 chr5 201414594 201414942 -1670590 - Charlie2 DNA MER1_type -68 2794 2426 2161 117 0 10 chr5 201414942 201415240 -1670292 - AluSg SINE Alu -15 295 1 884 205 71 132 chr5 201415240 201415294 -1670238 - Charlie2 DNA MER1_type -436 2426 2370 1612 93 97 4 chr5 201415294 201415520 -1670012 - AluSx SINE Alu -15 297 51 884 205 71 132 chr5 201415520 201415657 -1669875 - Charlie2 DNA MER1_type -492 2370 2310 2481 60 0 13 chr5 201415657 201415959 -1669573 - AluY SINE Alu -13 298 1 884 205 71 132 chr5 201415959 201416167 -1669365 - Charlie2 DNA MER1_type -552 2310 2091 2543 55 0 46 chr5 201416188 201416333 -1669199 + AluSq SINE Alu 1 151 -162 2234 82 0 47 chr5 201416333 201416652 -1668880 + AluY SINE Alu 1 304 -7 2543 55 0 46 chr5 201416652 201416834 -1668698 + AluSq SINE Alu 151 313 0 981 101 90 58 chr5 201416841 201417029 -1668503 + THE1B LTR MaLR 171 364 0 1226 143 0 0 chr5 201417029 201417188 -1668344 + AluSg/x SINE Alu 138 299 -13 2676 51 0 3 chr5 201417188 201417500 -1668032 + AluY SINE Alu 1 311 0 1226 143 0 0 chr5 201417500 201417515 -1668017 + AluSg/x SINE Alu 298 312 0 340 263 32 53 chr5 201417662 201417757 -1667775 - L1M4 LINE L1 -842 5304 5212 1064 103 0 0 chr5 201417906 201418042 -1667490 + AluSq/x SINE Alu 1 136 -176 2460 84 0 13 chr5 201418042 201418352 -1667180 + AluSx SINE Alu 1 306 -6 2597 55 7 3 chr5 201418353 201418661 -1666871 + AluY SINE Alu 1 309 -2 1049 177 135 0 chr5 201418661 201418927 -1666605 + L1MB1 LINE L1 5823 6124 -44 292 136 11 91 chr5 201418929 201419017 -1666515 - AluY SINE Alu -16 285 205 1122 144 6 12 chr5 201419089 201419256 -1666276 - AluSq SINE Alu -147 166 1 321 133 17 0 chr5 201419260 201419320 -1666212 + L1MB2 LINE L1 6104 6164 -7 1792 247 91 9 chr5 201419413 201419821 -1665711 + HAL1 LINE L1 1189 1670 -837 2015 130 0 14 chr5 201419821 201420008 -1665524 - AluSx SINE Alu 0 320 137 2288 96 7 0 chr5 201420008 201420300 -1665232 - AluSp SINE Alu -18 295 2 2015 130 0 14 chr5 201420300 201420436 -1665096 - AluSx SINE Alu -183 137 1 1792 247 91 9 chr5 201420436 201420665 -1664867 + HAL1 LINE L1 1670 1879 -628 366 225 7 106 chr5 201421233 201421339 -1664193 + L2 LINE L2 3186 3276 -37 1679 170 11 3 chr5 201421339 201421622 -1663910 - AluJb SINE Alu -11 301 17 366 225 7 106 chr5 201421622 201421657 -1663875 + L2 LINE L2 3276 3313 0 1718 95 107 0 chr5 201421861 201422123 -1663409 - AluSx SINE Alu -22 290 1 434 242 49 70 chr5 201422130 201422286 -1663246 + MER33 DNA MER1_type 1 151 -2434 2272 84 7 0 chr5 201422286 201422570 -1662962 + AluSg SINE Alu 10 295 -15 1949 157 28 0 chr5 201422580 201422867 -1662665 + AluJb SINE Alu 1 295 -17 434 242 49 70 chr5 201422867 201422896 -1662636 + MER33 DNA MER1_type 160 188 -2397 2487 85 0 0 chr5 201422896 201423201 -1662331 + AluSc SINE Alu 1 305 -4 434 242 49 70 chr5 201423201 201423246 -1662286 + MER33 DNA MER1_type 188 230 -94 314 185 208 8 chr5 201423262 201423392 -1662140 + MER33 DNA MER1_type 199 354 -9 10814 41 58 2 chr5 201425244 201426541 -1658991 - SVA Other Other 0 1386 31 1914 98 4 0 chr5 201426542 201426817 -1658715 - L1PB2 LINE L1 -181 5970 5695 379 256 138 12 chr5 201426817 201426977 -1658555 + L2 LINE L2 2459 2638 -676 2361 92 3 0 chr5 201429239 201429532 -1656000 + AluSx SINE Alu 1 294 -18 1598 162 81 4 chr5 201429543 201429814 -1655718 + AluJb SINE Alu 1 292 -20 2492 83 0 0 chr5 201429814 201430116 -1655416 + AluSq SINE Alu 1 302 -11 195 364 39 0 chr5 201430422 201430499 -1655033 - MIR SINE MIR -162 100 21 1703 146 25 72 chr5 201430697 201430823 -1654709 + AluJo SINE Alu 1 131 -181 2054 107 19 0 chr5 201430823 201431085 -1654447 - AluSx SINE Alu -45 267 1 1703 146 25 72 chr5 201431085 201431279 -1654253 + AluJo SINE Alu 131 306 -6 1454 167 87 22 chr5 201431997 201432273 -1653259 - AluJo SINE Alu -16 296 3 1898 109 0 73 chr5 201433247 201433560 -1651972 + AluSg SINE Alu 1 290 -20 2188 88 3 14 chr5 201433578 201433872 -1651660 + AluSx SINE Alu 1 291 -21 1065 166 105 34 chr5 201433873 201433897 -1651635 - Charlie2 DNA MER1_type -784 2078 2057 2268 84 10 14 chr5 201433897 201434194 -1651338 - AluSp SINE Alu -17 296 1 1065 166 105 34 chr5 201434194 201434465 -1651067 - Charlie2 DNA MER1_type -805 2057 1762 680 204 121 13 chr5 201434520 201434677 -1650855 - FAM SINE Alu -1 174 1 490 193 76 3 chr5 201434911 201435034 -1650498 + L1M3 LINE L1 5683 5812 -344 1724 135 24 38 chr5 201435135 201435424 -1650108 + AluJo SINE Alu 9 293 -19 850 187 13 0 chr5 201435424 201435579 -1649953 - FAM SINE Alu -18 157 1 1844 160 28 0 chr5 201435588 201435876 -1649656 - AluJb SINE Alu -16 296 1 1934 135 13 35 chr5 201437105 201437416 -1648116 - AluSx SINE Alu -8 304 1 596 150 40 0 chr5 201437493 201437593 -1647939 - AluJb SINE Alu -24 288 185 1072 106 21 0 chr5 201437694 201437836 -1647696 + AluSq SINE Alu 122 266 -47 378 333 6 0 chr5 201438428 201438590 -1646942 - L1M4 LINE L1 -937 5209 5047 1135 100 0 0 chr5 201438607 201438757 -1646775 + AluSg/x SINE Alu 158 307 -3 761 95 17 9 chr5 201438758 201438874 -1646658 - MSTD LTR MaLR -269 127 11 496 168 131 0 chr5 201438877 201439014 -1646518 - L1MB5 LINE L1 -225 5949 5795 280 161 0 0 chr5 201438967 201439023 -1646509 + L1MC4 LINE L1 7987 8042 0 * 1600 90 0 5 chr5 201439041 201439242 -1646290 + AluSq SINE Alu 1 200 -113 633 128 10 0 chr5 201439289 201439391 -1646141 + AluSg/x SINE Alu 203 305 -7 2348 86 10 0 chr5 201439790 201440081 -1645451 + AluSq SINE Alu 1 294 -19 380 305 85 0 chr5 201440145 201440309 -1645223 - HERV16 LTR ERVL -2777 2219 2042 299 90 11 67 chr5 201440311 201440400 -1645132 + (TTC)n Simple_repeat Simple_repeat 1 84 0 948 124 0 74 chr5 201440524 201440726 -1644806 + AluSq SINE Alu 74 260 -53 189 0 0 0 chr5 201440732 201440753 -1644779 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 2317 122 0 0 chr5 201441492 201441795 -1643737 - AluSx SINE Alu -8 304 2 216 269 167 0 chr5 201441855 201441933 -1643599 + L2 LINE L2 2439 2529 -785 737 225 0 18 chr5 201441997 201442166 -1643366 - AluJb SINE Alu -18 294 129 525 273 123 30 chr5 201442185 201442485 -1643047 + MLT1I LTR MaLR 79 406 -3 389 217 11 11 chr5 201442683 201442775 -1642757 - MER34 LTR ERV1 0 542 451 517 218 40 0 chr5 201442789 201442913 -1642619 - FLAM_A SINE Alu -2 131 3 972 175 48 57 chr5 201443162 201443390 -1642142 - AluJo SINE Alu -16 296 71 279 265 12 0 chr5 201443826 201443909 -1641623 - Charlie4 DNA MER1_type 0 1961 1878 710 298 32 11 chr5 201444966 201445245 -1640287 + LTR16A LTR ERVL 88 372 -78 1490 137 8 4 chr5 201446264 201446527 -1639005 + Tigger2 DNA MER2_type 1 264 -2454 1578 172 51 4 chr5 201446532 201446805 -1638727 + AluJo SINE Alu 6 291 -21 2277 96 0 0 chr5 201446814 201447115 -1638417 + AluSx SINE Alu 3 303 -9 2144 115 7 0 chr5 201447616 201447912 -1637620 - AluSx SINE Alu -14 298 1 1157 142 51 55 chr5 201448003 201448226 -1637306 - L1MB8 LINE L1 -9 6169 5946 2406 55 3 0 chr5 201448226 201448518 -1637014 + AluY SINE Alu 1 293 -18 1157 142 51 55 chr5 201448518 201448547 -1636985 - L1MB8 LINE L1 -232 5946 5918 1922 158 74 7 chr5 201448557 201448974 -1636558 - L1MB8 LINE L1 -323 5855 5411 2143 117 0 0 chr5 201450178 201450476 -1635056 - AluSg SINE Alu -12 298 1 298 333 73 0 chr5 201450630 201450726 -1634806 + L2 LINE L2 3201 3303 -10 2234 72 20 3 chr5 201450950 201451242 -1634290 - AluSc SINE Alu -12 297 1 201 344 94 36 chr5 201451294 201451518 -1634014 + L2 LINE L2 2825 3061 -211 192 329 13 51 chr5 201451637 201451716 -1633816 + L2 LINE L2 3192 3267 -5 338 307 74 37 chr5 201456342 201456612 -1628920 + L1ME4a LINE L1 5554 5833 -288 239 246 33 0 chr5 201456891 201456952 -1628580 - L2 LINE L2 -5 3267 3205 927 61 84 8 chr5 201457063 201457194 -1628338 - AluY SINE Alu -170 141 1 2370 84 6 0 chr5 201457215 201457526 -1628006 - AluSp SINE Alu 0 313 1 265 220 155 30 chr5 201457570 201457691 -1627841 + L1MC4a LINE L1 7610 7759 -49 2016 120 47 3 chr5 201457691 201457990 -1627542 - AluSx SINE Alu 0 312 1 265 220 155 30 chr5 201457990 201458036 -1627496 + L1MC4a LINE L1 7759 7798 -10 1460 136 75 25 chr5 201458036 201458316 -1627216 + AluJo SINE Alu 1 294 -18 248 254 67 67 chr5 201459760 201459925 -1625607 - MLT1K LTR MaLR -419 169 5 24 32 0 0 chr5 201462607 201462638 -1622894 + GC_rich Low_complexity Low_complexity 1 31 0 231 300 41 91 chr5 201463663 201463866 -1621666 - L2 LINE L2 -284 2988 2798 22 0 0 0 chr5 201464428 201464450 -1621082 + GC_rich Low_complexity Low_complexity 1 22 0 267 185 222 0 chr5 201465359 201465440 -1620092 - MIR SINE MIR -70 192 94 249 119 0 0 chr5 201466710 201466752 -1618780 + (CAGGG)n Simple_repeat Simple_repeat 5 46 0 276 286 12 12 chr5 201471378 201471462 -1614070 + Charlie8 DNA MER1_type 89 172 -2245 515 286 139 39 chr5 201472462 201472742 -1612790 + MLT1K LTR MaLR 254 561 -27 1154 174 21 13 chr5 201473865 201474101 -1611431 - Tigger2 DNA MER2_type -10 2708 2471 1835 197 13 28 chr5 201474179 201474377 -1611155 - Tigger2 DNA MER2_type -1984 734 543 1726 121 54 67 chr5 201474377 201474675 -1610857 - AluSg SINE Alu -16 294 1 1835 197 13 28 chr5 201474675 201474867 -1610665 - Tigger2 DNA MER2_type -2175 543 350 522 261 23 15 chr5 201476546 201476676 -1608856 - MIR SINE MIR -74 188 58 229 358 122 8 chr5 201476993 201477116 -1608416 - L2 LINE L2 -15 3298 3162 223 371 113 0 chr5 201477584 201477681 -1607851 + L2 LINE L2 3123 3230 -42 238 254 29 72 chr5 201477714 201477852 -1607680 - L1ME LINE L1 -366 5755 5624 1570 143 0 34 chr5 201477852 201478118 -1607414 - AluSx SINE Alu -10 302 46 1851 152 3 0 chr5 201478162 201478465 -1607067 - AluY SINE Alu -7 304 1 39 59 0 12 chr5 201478636 201478686 -1606846 + AT_rich Low_complexity Low_complexity 1 50 -34 2329 74 3 6 chr5 201478694 201479005 -1606527 - AluY SINE Alu -1 310 1 2302 75 0 34 chr5 201479005 201479178 -1606354 - AluSx SINE Alu -9 303 126 2203 109 0 10 chr5 201479178 201479489 -1606043 - AluSg SINE Alu -2 308 1 2346 84 0 13 chr5 201479490 201479801 -1605731 - AluSx SINE Alu -5 307 1 2302 75 0 34 chr5 201479801 201479937 -1605595 - AluSx SINE Alu -185 127 1 39 59 0 12 chr5 201479937 201479971 -1605561 + AT_rich Low_complexity Low_complexity 50 84 0 4579 48 5 4 chr5 201479971 201480531 -1605001 - L1PA5 LINE L1 -1 6153 5593 261 200 200 0 chr5 201480841 201480911 -1604621 - MLT1K LTR MaLR -352 236 153 189 0 0 0 chr5 201481353 201481374 -1604158 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1772 112 8 4 chr5 201481378 201481637 -1603895 - AluSg SINE Alu -50 260 1 2125 93 13 19 chr5 201482920 201483233 -1602299 + AluSx SINE Alu 1 311 -1 195 270 149 35 chr5 201483253 201483427 -1602105 - L2 LINE L2 -243 3070 2877 1062 232 132 5 chr5 201487158 201487551 -1597981 - L1MB8 LINE L1 -13 6165 5723 1818 133 58 0 chr5 201488385 201488663 -1596869 + AluSx SINE Alu 12 305 -7 259 253 184 11 chr5 201489640 201489727 -1595805 - MIR SINE MIR -83 179 78 2121 110 0 7 chr5 201491352 201491651 -1593881 - AluSx SINE Alu -15 297 1 2036 96 71 0 chr5 201491783 201492065 -1593467 - AluSq SINE Alu -11 302 1 2142 61 61 0 chr5 201492491 201492768 -1592764 - AluY SINE Alu -17 294 1 419 104 0 0 chr5 201493294 201493361 -1592171 - MER41B LTR ERV1 -88 547 481 2328 93 3 3 chr5 201493545 201493857 -1591675 - AluSp SINE Alu 0 313 2 326 291 46 40 chr5 201493947 201494098 -1591434 + HAL1 LINE L1 34 185 -2322 315 370 92 13 chr5 201494170 201494397 -1591135 + HAL1 LINE L1 290 534 -1973 1025 233 112 70 chr5 201494566 201495000 -1590532 + HAL1 LINE L1 788 1202 -1305 1322 198 3 48 chr5 201495000 201495327 -1590205 + AluJb SINE Alu 3 316 0 1025 233 112 70 chr5 201495327 201495585 -1589947 + HAL1 LINE L1 1202 1586 -921 1260 194 61 58 chr5 201495585 201495732 -1589800 - AluJo SINE Alu -7 295 150 2079 104 7 32 chr5 201495732 201496040 -1589492 - AluSg1 SINE Alu -9 300 1 1260 194 61 58 chr5 201496040 201496186 -1589346 - AluJo SINE Alu -152 150 1 1025 233 112 70 chr5 201496186 201496272 -1589260 + HAL1 LINE L1 1586 1667 -840 332 238 95 95 chr5 201496526 201496564 -1588968 + HAL1 LINE L1 2005 2042 -465 2159 105 0 10 chr5 201496564 201496868 -1588664 + AluSx SINE Alu 1 301 -11 332 238 95 95 chr5 201496868 201496972 -1588560 + HAL1 LINE L1 2042 2150 -357 2264 84 0 3 chr5 201496972 201497268 -1588264 - AluSc SINE Alu -14 295 1 332 238 95 95 chr5 201497268 201497292 -1588240 + HAL1 LINE L1 2149 2172 -335 10168 42 57 1 chr5 201499587 201500892 -1584640 - SVA Other Other 0 1386 31 1891 102 4 0 chr5 201500893 201500939 -1584593 - L1PB2 LINE L1 -181 5970 5925 609 307 19 26 chr5 201500939 201501206 -1584326 - L1ME2 LINE L1 -240 5924 5660 359 298 74 0 chr5 201501206 201501327 -1584205 + L2 LINE L2 2509 2638 -676 2222 92 3 0 chr5 201503591 201503884 -1581648 + AluSx SINE Alu 1 294 -18 1485 162 81 4 chr5 201503895 201504166 -1581366 + AluJb SINE Alu 1 292 -20 2383 79 0 0 chr5 201504166 201504469 -1581063 + AluSq SINE Alu 1 303 -10 197 364 39 0 chr5 201504775 201504852 -1580680 - MIR SINE MIR -162 100 21 1577 146 25 75 chr5 201505050 201505177 -1580355 + AluJo SINE Alu 1 133 -179 1927 107 19 0 chr5 201505177 201505439 -1580093 - AluSx SINE Alu -45 267 1 1577 146 25 75 chr5 201505439 201505633 -1579899 + AluJo SINE Alu 133 306 -6 1373 160 91 22 chr5 201506353 201506628 -1578904 - AluJo SINE Alu -16 296 3 2209 70 0 64 chr5 201507600 201507930 -1577602 + AluY SINE Alu 1 309 -2 2017 139 3 0 chr5 201507948 201508258 -1577274 + AluSx SINE Alu 1 311 -1 246 105 0 0 chr5 201508258 201508296 -1577236 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 511 218 0 0 chr5 201508394 201508495 -1577037 + AluJb SINE Alu 208 308 -4 1729 165 3 3 chr5 201508667 201508979 -1576553 + AluJo SINE Alu 1 312 0 600 138 5 2 chr5 201509481 201509672 -1575860 + AluSx SINE Alu 2 236 -73 1162 141 9 33 chr5 201509706 201509919 -1575613 - AluJb SINE Alu -88 224 17 716 185 28 11 chr5 201509933 201510111 -1575421 - L1M4 LINE L1 -1763 4383 4203 706 264 93 7 chr5 201510121 201510401 -1575131 - L1MEd LINE L1 -4862 1257 954 810 115 0 0 chr5 201510403 201510516 -1575016 - AluSx SINE Alu -6 303 191 1084 99 0 0 chr5 201510517 201510658 -1574874 - AluSx SINE Alu -171 141 1 500 319 130 69 chr5 201510663 201510706 -1574826 - L1MEd LINE L1 -5164 955 916 1693 157 7 20 chr5 201510706 201511006 -1574526 - AluSx SINE Alu -16 296 1 500 319 130 69 chr5 201511006 201511043 -1574489 - L1MEd LINE L1 -5203 916 883 858 133 8 184 chr5 201511043 201511277 -1574255 + 7SK RNA RNA 1 193 0 500 319 130 69 chr5 201511277 201511485 -1574047 - L1MEd LINE L1 -5236 883 689 2083 120 3 0 chr5 201511485 201511786 -1573746 - AluSc SINE Alu -7 302 1 500 319 130 69 chr5 201511786 201512243 -1573289 - L1MEd LINE L1 -5430 689 261 617 141 0 0 chr5 201512243 201512335 -1573197 - HY4 scRNA scRNA 0 93 2 500 319 130 69 chr5 201512335 201512367 -1573165 - L1MEd LINE L1 -5858 261 232 2215 98 7 7 chr5 201512367 201512674 -1572858 - AluSg SINE Alu -3 307 1 500 319 130 69 chr5 201512674 201512790 -1572742 - L1MEd LINE L1 -5887 232 3 258 324 55 14 chr5 201512888 201513033 -1572499 + MER5B DNA MER1_type 10 160 -18 306 229 16 0 chr5 201513625 201513686 -1571846 + L1ME LINE L1 5374 5435 -2373 1335 268 78 37 chr5 201513708 201514171 -1571361 - L2 LINE L2 -4 3309 2828 1008 233 45 0 chr5 201515524 201515747 -1569785 + MER45B DNA AcHobo 80 312 -728 382 333 8 8 chr5 201515747 201515879 -1569653 - L2 LINE L2 -1377 1937 1806 568 310 154 8 chr5 201515934 201516305 -1569227 + MLT1J2 LTR MaLR 4 428 -22 207 0 0 0 chr5 201516810 201516833 -1568699 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2274 79 3 3 chr5 201516891 201517195 -1568337 + AluY SINE Alu 1 304 -7 1715 114 0 34 chr5 201517242 201517505 -1568027 + AluSx SINE Alu 49 302 -10 300 237 29 79 chr5 201517505 201517644 -1567888 + L1ME LINE L1 5624 5755 -366 349 298 84 15 chr5 201517677 201517808 -1567724 - L2 LINE L2 -42 3271 3132 295 333 113 7 chr5 201518239 201518380 -1567152 + L2 LINE L2 3158 3313 0 2039 101 11 0 chr5 201518691 201518998 -1566534 + AluSg SINE Alu 1 310 0 1255 116 0 11 chr5 201519030 201519211 -1566321 - AluSx SINE Alu -133 179 1 2387 52 0 0 chr5 201519219 201519510 -1566022 - AluY SINE Alu -10 301 11 260 219 0 85 chr5 201519622 201519704 -1565828 + L1 LINE L1 4883 4957 -1189 503 239 60 22 chr5 201519704 201519838 -1565694 + FLAM_A SINE Alu 1 139 -3 358 330 105 25 chr5 201520062 201520262 -1565270 + L1M4 LINE L1 4009 4224 -1922 275 139 0 0 chr5 201520276 201520319 -1565213 - AluS SINE Alu -223 79 37 1919 106 50 13 chr5 201520328 201520629 -1564903 - AluSq SINE Alu -1 312 1 388 333 60 25 chr5 201520635 201520836 -1564696 + L1M4 LINE L1 4215 4422 -1724 2174 96 3 0 chr5 201521104 201521405 -1564127 - AluSg SINE Alu -8 302 1 240 284 172 17 chr5 201521482 201521598 -1563934 + MIR SINE MIR 63 196 -66 1581 155 10 17 chr5 201521674 201521964 -1563568 - AluJb SINE Alu -15 297 10 1574 164 18 7 chr5 201522008 201522318 -1563214 + AluJb SINE Alu 1 313 0 2203 73 0 64 chr5 201522367 201522695 -1562837 + AluSc SINE Alu 1 307 -2 2415 66 7 0 chr5 201522932 201523237 -1562295 + AluSp SINE Alu 2 308 -5 22 0 0 0 chr5 201524129 201524151 -1561381 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 201524653 201524682 -1560850 + AT_rich Low_complexity Low_complexity 1 29 0 428 62 31 0 chr5 201524773 201524838 -1560694 - AluSq SINE Alu -6 305 239 1576 75 0 0 chr5 201524838 201525037 -1560495 - AluSq SINE Alu -114 199 1 281 216 81 0 chr5 201525500 201525574 -1559958 + MER89 LTR ERV1 1 80 -479 849 225 172 14 chr5 201525594 201525879 -1559653 + MER89 LTR ERV1 229 558 -1 33 43 0 0 chr5 201526205 201526252 -1559280 + AT_rich Low_complexity Low_complexity 1 47 0 784 169 0 15 chr5 201526649 201526779 -1558753 + FRAM SINE Alu 1 122 -54 2259 101 0 0 chr5 201526802 201527108 -1558424 + AluSg SINE Alu 1 306 -4 1422 149 68 42 chr5 201527161 201527470 -1558062 + MER44D DNA MER2_type 23 609 0 860 199 13 0 chr5 201533218 201533374 -1552158 - AluSg/x SINE Alu -18 292 135 1726 105 4 0 chr5 201533376 201533614 -1551918 - AluSq SINE Alu -35 278 40 285 303 55 14 chr5 201534148 201534293 -1551239 + MER5B DNA MER1_type 10 160 -18 476 271 67 38 chr5 201536150 201536444 -1549088 + MLT1K LTR MaLR 254 584 -4 188 114 57 0 chr5 201537400 201537435 -1548097 + L2 LINE L2 2776 2812 -502 734 158 82 22 chr5 201541643 201541826 -1543706 + L1MB2 LINE L1 5414 5607 -564 1519 163 0 31 chr5 201541826 201542145 -1543387 + AluJb SINE Alu 1 309 -3 790 174 29 7 chr5 201542165 201542303 -1543229 + AluJo SINE Alu 13 153 -159 1149 232 100 74 chr5 201542543 201543153 -1542379 + L1M4 LINE L1 2565 3200 -2946 1390 152 31 65 chr5 201543153 201543476 -1542056 + AluJo SINE Alu 1 312 0 1149 232 100 74 chr5 201543476 201543625 -1541907 + L1M4 LINE L1 3200 3344 -2802 651 199 53 6 chr5 201543603 201543780 -1541752 + L1MB2 LINE L1 5928 6127 -44 * 1015 117 58 58 chr5 201544256 201544496 -1541036 + AluJb SINE Alu 73 311 -1 453 19 0 0 chr5 201544567 201544621 -1540911 + (CA)n Simple_repeat Simple_repeat 1 54 0 585 281 8 24 chr5 201544655 201544908 -1540624 + L1M4 LINE L1 3392 3640 -2506 422 276 72 30 chr5 201545074 201545368 -1540164 + MLT1K LTR MaLR 254 584 -4 190 114 57 0 chr5 201546418 201546453 -1539079 + L2 LINE L2 2776 2812 -502 851 155 72 0 chr5 201550661 201550842 -1534690 + L1MB3 LINE L1 5414 5607 -564 1860 158 0 10 chr5 201550842 201551152 -1534380 + AluJb SINE Alu 1 307 -5 993 178 99 0 chr5 201551169 201551360 -1534172 + AluJo SINE Alu 11 220 -92 266 109 0 0 chr5 201551360 201551406 -1534126 + FLAM SINE Alu 86 131 -2 23 0 0 0 chr5 201551406 201551429 -1534103 + AT_rich Low_complexity Low_complexity 1 23 0 2206 127 0 3 chr5 201551437 201551751 -1533781 + AluSq SINE Alu 1 313 0 1427 191 99 6 chr5 201551753 201552115 -1533417 + L1MB3 LINE L1 5769 6164 -19 602 188 18 0 chr5 201554675 201554787 -1530745 + L1MA10 LINE L1 6213 6326 -8 530 280 125 44 chr5 201555240 201555561 -1529971 + L2 LINE L2 1208 1554 -1760 282 265 51 0 chr5 201555564 201555662 -1529870 + L1ME3A LINE L1 6060 6162 -8 2223 117 0 0 chr5 201556006 201556304 -1529228 - AluSx SINE Alu -14 298 1 493 275 167 13 chr5 201556311 201556616 -1528916 - HAL1b LINE L1 -515 833 482 1463 132 8 25 chr5 201556644 201556879 -1528653 + AluSx SINE Alu 24 254 -58 1397 145 12 33 chr5 201556973 201557215 -1528317 - AluSx SINE Alu -75 237 1 376 306 104 67 chr5 201557223 201557806 -1527726 - L1ME LINE L1 -4802 1581 911 198 265 20 0 chr5 201558169 201558218 -1527314 - L2 LINE L2 -158 3155 3106 2547 168 48 4 chr5 201558503 201559021 -1526511 + L1MB3 LINE L1 5568 6108 -75 1128 299 92 32 chr5 201559021 201559188 -1526344 + L2 LINE L2 2506 2662 -651 1371 203 34 28 chr5 201559188 201559364 -1526168 - MER33 DNA MER1_type -2261 324 144 2085 100 3 20 chr5 201559364 201559664 -1525868 + AluSx SINE Alu 1 295 -17 1371 203 34 28 chr5 201559664 201559808 -1525724 - MER33 DNA MER1_type -2441 144 2 1128 299 92 32 chr5 201559808 201560420 -1525112 + L2 LINE L2 2662 3312 -1 1288 247 90 90 chr5 201560894 201561781 -1523751 + L1MC5 LINE L1 6802 7688 -273 2426 45 10 0 chr5 201563093 201563384 -1522148 - AluY SINE Alu -17 294 1 229 324 176 36 chr5 201563427 201563649 -1521883 - L2 LINE L2 -430 2884 2694 1817 162 16 7 chr5 201563649 201563952 -1521580 + AluJb SINE Alu 1 306 -6 229 324 176 36 chr5 201563952 201564195 -1521337 - L2 LINE L2 -620 2694 2354 558 248 19 27 chr5 201566866 201567028 -1518504 + MIR SINE MIR 35 188 -72 1927 135 7 0 chr5 201568935 201569217 -1516315 - AluJb SINE Alu -28 284 1 1406 235 145 45 chr5 201569896 201570406 -1515126 + MER34B LTR ERV1 5 565 0 310 71 0 0 chr5 201570442 201570484 -1515048 - Alu SINE Alu -257 42 1 354 152 0 0 chr5 201570484 201570550 -1514982 + MLT1D LTR MaLR 438 503 -2 2038 139 0 3 chr5 201570585 201570880 -1514652 - AluSx SINE Alu -18 294 1 2327 56 0 3 chr5 201570977 201571263 -1514269 - AluY SINE Alu -26 285 1 476 206 84 13 chr5 201571264 201571363 -1514169 - L1M4 LINE L1 -3103 3043 2928 2069 116 0 38 chr5 201571363 201571681 -1513851 - AluSx SINE Alu -6 306 1 476 206 84 13 chr5 201571681 201571736 -1513796 - L1M4 LINE L1 -3218 2928 2878 845 134 0 0 chr5 201572090 201572209 -1513323 + AluSq/x SINE Alu 1 119 -193 2246 97 0 7 chr5 201572209 201572509 -1513023 - AluY SINE Alu -13 298 1 2180 115 0 0 chr5 201572509 201572805 -1512727 - AluSx SINE Alu -16 296 1 206 263 237 0 chr5 201573123 201573199 -1512333 + MIR SINE MIR 118 211 -51 1577 142 127 4 chr5 201574006 201574281 -1511251 + AluJb SINE Alu 3 311 -1 1413 225 45 0 chr5 201574562 201574895 -1510637 + MER82 DNA MER2_type 6 353 -300 1549 148 70 0 chr5 201575559 201575829 -1509703 + AluJb SINE Alu 1 289 -23 781 245 69 9 chr5 201575936 201576169 -1509363 - MIR SINE MIR 0 262 16 417 333 0 36 chr5 201577240 201577378 -1508154 + MIR SINE MIR 79 211 -51 2753 207 38 27 chr5 201577503 201578141 -1507391 + MER82 DNA MER2_type 1 645 -8 2511 40 0 3 chr5 201578277 201578581 -1506951 - AluY SINE Alu -8 303 1 2202 229 116 14 chr5 201579117 201579946 -1505586 - MER69 DNA AcHobo 0 2526 1614 1464 104 10 0 chr5 201579950 201580152 -1505380 - AluSg/x SINE Alu -24 286 83 284 229 0 0 chr5 201580871 201580932 -1504600 + Charlie8 DNA MER1_type 137 197 -2220 210 146 37 61 chr5 201581550 201581632 -1503900 + (CCCCG)n Simple_repeat Simple_repeat 2 81 0 271 198 42 10 chr5 201581681 201581777 -1503755 + (CCCG)n Simple_repeat Simple_repeat 2 100 0 241 145 32 0 chr5 201581941 201582003 -1503529 + (CGGGG)n Simple_repeat Simple_repeat 2 65 0 2143 87 13 7 chr5 201582337 201582637 -1502895 - AluSx SINE Alu -10 302 1 297 200 18 0 chr5 201583346 201583401 -1502131 - MER5A DNA MER1_type 0 189 134 694 174 0 0 chr5 201583406 201583521 -1502011 + FLAM_A SINE Alu 22 136 -6 359 247 0 0 chr5 201583550 201583623 -1501909 - MER5A DNA MER1_type -110 79 7 3438 180 54 28 chr5 201583700 201584330 -1501202 - L1MB7 LINE L1 -16 6168 5509 2261 87 10 3 chr5 201584330 201584630 -1500902 + AluSg SINE Alu 1 302 -8 3438 180 54 28 chr5 201584630 201584826 -1500706 - L1MB7 LINE L1 -675 5509 5320 2356 89 0 0 chr5 201584832 201585135 -1500397 - AluSx SINE Alu -9 303 1 414 263 26 19 chr5 201585519 201585675 -1499857 + MLT1K LTR MaLR 432 588 0 27 0 0 0 chr5 201586033 201586060 -1499472 + AT_rich Low_complexity Low_complexity 1 27 0 1811 169 0 7 chr5 201588804 201589105 -1496427 + AluJb SINE Alu 1 299 -13 2042 124 3 3 chr5 201589114 201589413 -1496119 + AluSx SINE Alu 12 310 -2 213 291 18 0 chr5 201590023 201590078 -1495454 + L2 LINE L2 3206 3261 -11 829 133 140 7 chr5 201590301 201590451 -1495081 + AluJb SINE Alu 134 303 -9 2384 71 0 0 chr5 201590966 201591261 -1494271 + AluY SINE Alu 1 295 -16 1867 147 7 13 chr5 201591776 201592082 -1493450 + AluJb SINE Alu 1 304 -8 201 39 0 0 chr5 201594827 201594853 -1490679 + (TA)n Simple_repeat Simple_repeat 2 27 0 571 104 0 0 chr5 201594853 201594930 -1490602 - AluSp/q SINE Alu -20 293 217 600 234 160 23 chr5 201594930 201595186 -1490346 - HAL1 LINE L1 -178 2329 2039 * 2547 209 52 58 chr5 201595159 201595572 -1489960 - L1ME2 LINE L1 -1 6163 5749 1783 132 4 0 chr5 201595572 201595815 -1489717 + AluSx SINE Alu 1 244 -68 * 2156 102 3 3 chr5 201595814 201596107 -1489425 + AluSg SINE Alu 18 310 0 2547 209 52 58 chr5 201595815 201596366 -1489166 - L1ME2 LINE L1 -415 5749 5196 2141 117 13 7 chr5 201596366 201596665 -1488867 - AluSx SINE Alu -11 301 1 2547 209 52 58 chr5 201596665 201596712 -1488820 - L1ME2 LINE L1 -968 5196 5150 1752 144 15 0 chr5 201596712 201596975 -1488557 + AluJb SINE Alu 1 267 -45 2547 209 52 58 chr5 201596975 201597470 -1488062 - L1ME2 LINE L1 -1014 5150 4778 2143 139 24 60 chr5 201597470 201597888 -1487644 + MER57A LTR ERV1 1 403 0 2547 209 52 58 chr5 201597888 201597961 -1487571 - L1ME2 LINE L1 -1386 4778 4706 727 109 0 0 chr5 201598141 201598242 -1487290 + FLAM_A SINE Alu 22 122 -20 27 0 0 0 chr5 201598242 201598269 -1487263 + AT_rich Low_complexity Low_complexity 1 27 0 2347 88 7 0 chr5 201598271 201598568 -1486964 + AluSp SINE Alu 2 300 -13 2072 97 47 17 chr5 201598572 201598870 -1486662 + AluSx SINE Alu 1 307 -5 2138 186 54 5 chr5 201599089 201599497 -1486035 + MER21B LTR ERV1 5 432 -431 195 114 0 0 chr5 201599558 201599593 -1485939 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1669 170 7 20 chr5 201599595 201599889 -1485643 - AluJo SINE Alu -22 290 1 1723 191 50 69 chr5 201600376 201600420 -1485112 + MER21B LTR ERV1 443 486 -377 2403 89 3 10 chr5 201600420 201600734 -1484798 + AluSx SINE Alu 1 312 0 1723 191 50 69 chr5 201600734 201601107 -1484425 + MER21B LTR ERV1 486 852 -11 3194 264 64 45 chr5 201601415 201601637 -1483895 - L1ME3A LINE L1 -5 6148 5932 2303 97 7 13 chr5 201601637 201601946 -1483586 - AluY SINE Alu -4 307 1 3194 264 64 45 chr5 201601946 201602671 -1482861 - L1ME3A LINE L1 -221 5932 5222 2596 54 0 10 chr5 201602671 201602985 -1482547 - AluY SINE Alu 0 311 1 3194 264 64 45 chr5 201602985 201603522 -1482010 - L1ME3A LINE L1 -931 5222 4696 2274 119 0 0 chr5 201603522 201603816 -1481716 + AluJb SINE Alu 1 294 -18 3194 264 64 45 chr5 201603816 201604101 -1481431 - L1ME3A LINE L1 -1457 4696 4418 2368 103 0 3 chr5 201604101 201604412 -1481120 - AluSg SINE Alu 0 310 1 3194 264 64 45 chr5 201604412 201604813 -1480719 - L1ME3A LINE L1 -1735 4418 3931 1936 143 30 10 chr5 201604813 201605114 -1480418 + AluSx SINE Alu 1 307 -5 3194 264 64 45 chr5 201605114 201605168 -1480364 - L1ME3A LINE L1 -2222 3931 3879 2236 88 3 23 chr5 201605543 201605851 -1479681 + AluSx SINE Alu 1 302 -10 2263 99 0 7 chr5 201606324 201606616 -1478916 - AluSx SINE Alu -22 290 1 225 248 9 92 chr5 201606616 201606649 -1478883 - L1ME3A LINE L1 -2391 3738 3704 1960 112 8 0 chr5 201606649 201606908 -1478624 + AluSx SINE Alu 38 298 -14 225 248 9 92 chr5 201606908 201606983 -1478549 - L1ME3A LINE L1 -2425 3704 3639 227 195 98 12 chr5 201607010 201607092 -1478440 + L1M4 LINE L1 3256 3344 -2802 278 53 0 0 chr5 201607130 201607168 -1478364 + L1MB2 LINE L1 6011 6048 -123 758 279 4 28 chr5 201607169 201607420 -1478112 - L1ME3A LINE L1 -2506 3623 3379 255 31 0 0 chr5 201607455 201607487 -1478045 + (TG)n Simple_repeat Simple_repeat 1 32 0 1654 129 4 4 chr5 201607584 201607825 -1477707 - AluJb SINE Alu -17 295 55 719 189 53 6 chr5 201608283 201608460 -1477072 - L1MB2 LINE L1 -44 6127 5928 * 1547 230 108 58 chr5 201608438 201608584 -1476948 - L1ME3A LINE L1 -2802 3327 3190 1444 155 31 65 chr5 201608584 201608907 -1476625 - AluJo SINE Alu 0 312 1 1547 230 108 58 chr5 201608907 201609503 -1476029 - L1ME3A LINE L1 -2939 3190 2548 22 0 0 0 chr5 201609778 201609800 -1475732 + AT_rich Low_complexity Low_complexity 1 22 0 238 271 108 16 chr5 201610047 201610176 -1475356 - L1ME3A LINE L1 -4586 1724 1584 1472 112 108 28 chr5 201610178 201610428 -1475104 - AluJo SINE Alu -12 300 31 913 133 0 60 chr5 201610435 201610585 -1474947 - AluJo SINE Alu -171 141 1 4544 172 34 76 chr5 201610726 201611961 -1473571 + L1MB5 LINE L1 4690 5975 -199 270 0 0 0 chr5 201611961 201611991 -1473541 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 366 42 0 0 chr5 201611990 201612038 -1473494 + (GA)n Simple_repeat Simple_repeat 1 48 0 4544 172 34 76 chr5 201611991 201612038 -1473494 + L1MB5 LINE L1 5975 6022 -152 1837 145 11 4 chr5 201612038 201612314 -1473218 - AluJb SINE Alu -34 278 1 4544 172 34 76 chr5 201612314 201612595 -1472937 + L1MB5 LINE L1 6022 6126 -48 2000 103 44 4 chr5 201613002 201613298 -1472234 + AluSx SINE Alu 1 307 0 2142 89 25 57 chr5 201614278 201614593 -1470939 - AluSg SINE Alu -5 305 1 384 100 0 0 chr5 201614595 201614655 -1470877 + L1MB5 LINE L1 6115 6174 0 549 258 124 46 chr5 201614667 201615234 -1470298 - L1MEd LINE L1 -4772 1357 733 2261 90 3 0 chr5 201616971 201617260 -1468272 + AluSc SINE Alu 1 290 -19 273 261 88 26 chr5 201617637 201617752 -1467780 - MIR SINE MIR -64 144 47 2363 75 10 7 chr5 201618031 201618325 -1467207 - AluSg SINE Alu -15 295 1 1025 104 115 38 chr5 201618514 201618697 -1466835 - AluSg/x SINE Alu -6 304 108 833 151 40 0 chr5 201618700 201618826 -1466706 + AluJo/FRAM SINE Alu 165 295 -17 728 122 0 9 chr5 201619051 201619158 -1466374 + AluSq/x SINE Alu 2 107 -206 2660 30 0 3 chr5 201620611 201620909 -1464623 - AluY SINE Alu -13 298 2 792 233 98 8 chr5 201621548 201621784 -1463748 + MIR SINE MIR 6 262 0 356 262 35 23 chr5 201621809 201621981 -1463551 + (TATATG)n Simple_repeat Simple_repeat 5 178 0 583 286 56 17 chr5 201622103 201622334 -1463198 + MIR SINE MIR 4 243 -19 2294 106 0 16 chr5 201622444 201622756 -1462776 + AluSx SINE Alu 1 307 -5 2420 83 3 3 chr5 201623018 201623320 -1462212 - AluSx SINE Alu -8 304 3 1238 169 29 5 chr5 201623324 201623531 -1462001 - AluJo SINE Alu -15 297 86 2118 142 157 12 chr5 201623738 201624146 -1461386 + LTR24 LTR ERV1 1 467 0 1911 151 7 20 chr5 201624174 201624473 -1461059 - AluSx SINE Alu -17 295 1 4207 196 135 69 chr5 201625228 201625440 -1460092 + L1MB7 LINE L1 2452 2649 -3535 2051 27 0 0 chr5 201625440 201625665 -1459867 - AluY SINE Alu -12 299 75 4207 196 135 69 chr5 201625665 201626108 -1459424 + L1MB7 LINE L1 2649 3061 -3123 922 161 25 6 chr5 201626108 201626269 -1459263 + AluJb SINE Alu 137 300 -12 4207 196 135 69 chr5 201626269 201628783 -1456749 + L1MB7 LINE L1 3061 6165 -19 421 264 37 18 chr5 201629118 201629281 -1456251 - L2 LINE L2 0 3272 3107 23 33 0 0 chr5 201629536 201629566 -1455966 + AT_rich Low_complexity Low_complexity 1 30 0 2171 130 0 0 chr5 201631186 201631494 -1454038 + AluSx SINE Alu 1 308 -4 2790 13 0 0 chr5 201631935 201632233 -1453299 - AluYa5 SINE Alu -13 298 1 530 267 114 17 chr5 201632248 201632484 -1453048 - MER112 DNA MER1_type -1 259 1 279 187 47 147 chr5 201632637 201632743 -1452789 - L3 LINE CR1 -101 1476 1388 2143 122 20 0 chr5 201632743 201633037 -1452495 - AluSq SINE Alu -13 300 1 279 187 47 147 chr5 201633037 201633080 -1452452 - L3 LINE CR1 -189 1388 1342 201 281 42 52 chr5 201633141 201633237 -1452295 + MIR SINE MIR 165 259 -3 275 280 187 33 chr5 201633260 201633417 -1452115 - L3 LINE CR1 -304 1273 1083 2162 97 0 7 chr5 201633417 201633696 -1451836 + AluSg1 SINE Alu 16 292 -17 275 280 187 33 chr5 201633696 201633720 -1451812 - L3 LINE CR1 -494 1083 1064 30 27 0 0 chr5 201634102 201634139 -1451393 + AT_rich Low_complexity Low_complexity 1 37 0 558 286 102 5 chr5 201635955 201636161 -1449371 - MIR SINE MIR -8 254 29 420 327 194 16 chr5 201636761 201637324 -1448208 - L3 LINE CR1 -27 1550 888 199 116 0 93 chr5 201639314 201639357 -1446175 + L2 LINE L2 3247 3285 -28 183 209 0 0 chr5 201639575 201639618 -1445914 + L2 LINE L2 3269 3311 -2 2406 46 7 0 chr5 201642070 201642377 -1443155 + AluY SINE Alu 1 309 0 2311 112 0 0 chr5 201642440 201642752 -1442780 + AluSx SINE Alu 1 312 0 769 218 104 16 chr5 201642802 201642995 -1442537 + MER20 DNA MER1_type 8 217 -2 1707 145 44 27 chr5 201643643 201643764 -1441768 + AluJo SINE Alu 2 119 -193 2385 81 0 3 chr5 201643764 201644062 -1441470 + AluSq SINE Alu 1 297 -16 1707 145 44 27 chr5 201644062 201644236 -1441296 + AluJo SINE Alu 119 302 -10 2396 80 0 0 chr5 201645425 201645725 -1439807 - AluY SINE Alu -11 300 1 591 177 150 14 chr5 201649379 201649526 -1436006 + MER20 DNA MER1_type 53 219 0 724 134 34 0 chr5 201650109 201650228 -1435304 + AluJo SINE Alu 14 136 -176 22 0 0 0 chr5 201650747 201650769 -1434763 + AT_rich Low_complexity Low_complexity 1 22 0 228 319 117 18 chr5 201651146 201651309 -1434223 + MIR SINE MIR 62 240 -22 720 183 0 16 chr5 201651499 201651625 -1433907 + AluJo/FLAM SINE Alu 2 125 -177 2264 93 3 10 chr5 201651627 201651961 -1433571 + AluSx SINE Alu 1 312 0 318 279 62 23 chr5 201655245 201655374 -1430158 + MER94 DNA DNA 1 134 0 653 273 103 44 chr5 201655501 201655907 -1429625 - L1MC5 LINE L1 -48 7913 7484 254 222 0 0 chr5 201655914 201655977 -1429555 - L1MA10 LINE L1 -3 6331 6269 2459 230 88 29 chr5 201656053 201656623 -1428909 - L1ME1 LINE L1 -99 6067 5532 1585 189 3 31 chr5 201656623 201656940 -1428592 - AluJb SINE Alu 0 309 1 2459 230 88 29 chr5 201656940 201657974 -1427558 - L1ME1 LINE L1 -634 5532 4367 741 186 0 0 chr5 201657982 201658095 -1427437 - FLAM_A SINE Alu -20 122 10 2170 239 84 27 chr5 201658126 201658841 -1426691 - L1ME1 LINE L1 -1787 4359 3604 1066 160 90 0 chr5 201658863 201659051 -1426481 + MER46A DNA MER2_type 31 235 -1 9412 161 73 23 chr5 201659096 201660897 -1424635 - Tigger2 DNA MER2_type -691 2027 136 7535 232 78 42 chr5 201660926 201661216 -1424316 - L1PBb LINE L1 -1713 5136 4858 1958 152 0 7 chr5 201661216 201661525 -1424007 - AluJb SINE Alu -5 307 1 7535 232 78 42 chr5 201661525 201663030 -1422502 - L1PBb LINE L1 -1991 4858 3408 2210 109 55 33 chr5 201663030 201663397 -1422135 - THE1C LTR MaLR 0 375 1 7535 232 78 42 chr5 201663397 201664072 -1421460 - L1PBb LINE L1 -3441 3408 2758 7316 85 24 21 chr5 201664072 201665076 -1420456 - LTR13 LTR ERVK 0 1007 1 7535 232 78 42 chr5 201665076 201665680 -1419852 - L1PBb LINE L1 -4091 2758 2060 3262 126 11 2 chr5 201665683 201666151 -1419381 - MER1A DNA MER1_type 0 529 58 2499 67 0 3 chr5 201666198 201666498 -1419034 - AluY SINE Alu -12 299 1 331 156 91 0 chr5 201666505 201666582 -1418950 - L1PBb LINE L1 -4791 2058 1975 671 229 33 112 chr5 201666618 201666781 -1418751 - L1PBb LINE L1 -5114 1736 1562 8092 42 17 2 chr5 201666781 201668545 -1416987 - L1PA5 LINE L1 0 6154 4375 671 229 33 112 chr5 201668545 201668820 -1416712 - L1PBb LINE L1 -5288 1562 1336 * 864 311 20 54 chr5 201668810 201669219 -1416313 - L1PA12 LINE L1 -5290 1559 1165 1539 262 32 63 chr5 201669387 201670020 -1415512 - L1PA12 LINE L1 -6232 617 5 10661 230 87 35 chr5 201670035 201671182 -1414350 - L1 LINE L1 -1509 5658 4571 1540 161 0 109 chr5 201671182 201671391 -1414141 - AluY SINE Alu 0 311 154 2291 75 0 17 chr5 201671391 201671684 -1413848 - AluY SINE Alu -23 288 1 1540 161 0 109 chr5 201671684 201671823 -1413709 - AluY SINE Alu -157 154 1 10661 230 87 35 chr5 201671823 201671897 -1413635 - L1 LINE L1 -2596 4571 4502 2309 101 3 0 chr5 201671897 201672195 -1413337 - AluSc SINE Alu -10 299 1 10661 230 87 35 chr5 201672195 201672537 -1412995 - L1 LINE L1 -2665 4502 4179 585 222 0 8 chr5 201672537 201672654 -1412878 - FLAM_A SINE Alu -17 116 1 10661 230 87 35 chr5 201672654 201672916 -1412616 - L1 LINE L1 -2988 4179 3932 230 56 28 0 chr5 201672916 201672952 -1412580 + (TA)n Simple_repeat Simple_repeat 1 37 0 10661 230 87 35 chr5 201672952 201673067 -1412465 - L1 LINE L1 -3235 3932 3824 2225 123 7 0 chr5 201673067 201673377 -1412155 - AluSx SINE Alu 0 312 1 10661 230 87 35 chr5 201673377 201673496 -1412036 - L1 LINE L1 -3343 3824 3713 2258 112 16 0 chr5 201673496 201673800 -1411732 + AluSx SINE Alu 1 309 -3 10661 230 87 35 chr5 201673800 201676967 -1408565 - L1 LINE L1 -3454 3713 3 711 228 43 0 chr5 201677964 201678148 -1407384 - MIR SINE MIR -1 261 70 253 286 126 42 chr5 201678441 201678560 -1406972 - MIR SINE MIR -64 144 16 2145 110 0 3 chr5 201679202 201679492 -1406040 + AluSx SINE Alu 1 289 -23 247 247 55 14 chr5 201679887 201679960 -1405572 - L2 LINE L2 -4 3268 3193 2116 137 0 0 chr5 201681175 201681475 -1404057 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr5 201682045 201682065 -1403467 + (T)n Simple_repeat Simple_repeat 1 20 0 344 307 31 12 chr5 201682246 201682409 -1403123 + L1MD2 LINE L1 276 441 -6099 1276 240 42 24 chr5 201682458 201682659 -1402873 + L1MD2 LINE L1 3032 3228 -3312 1985 161 3 0 chr5 201682659 201682963 -1402569 + AluSx SINE Alu 1 305 -7 1276 240 42 24 chr5 201682963 201683170 -1402362 + L1MD2 LINE L1 3228 3447 -3093 4496 176 45 83 chr5 201683173 201684021 -1401511 + L1MD2 LINE L1 5393 6271 -482 1647 110 18 64 chr5 201684021 201684347 -1401185 + AluYb8 SINE Alu 1 311 -7 4496 176 45 83 chr5 201684347 201684451 -1401081 + L1MD2 LINE L1 6271 6377 -376 2097 136 3 3 chr5 201684451 201684752 -1400780 - AluSx SINE Alu -11 301 1 4496 176 45 83 chr5 201684752 201685189 -1400343 + L1MD2 LINE L1 6377 6731 -22 1424 186 150 77 chr5 201685185 201685578 -1399954 + L1MC4 LINE L1 7471 7915 -127 * 1539 191 14 14 chr5 201685578 201685872 -1399660 + AluJo SINE Alu 1 294 -18 1424 186 150 77 chr5 201685872 201686011 -1399521 + L1MC4 LINE L1 7915 8042 0 1857 156 17 3 chr5 201688796 201689091 -1396441 + AluJb SINE Alu 1 299 -13 252 105 0 0 chr5 201689444 201689482 -1396050 + MARNA DNA Mariner 203 240 -346 423 155 60 0 chr5 201689535 201689703 -1395829 + GA-rich Low_complexity Low_complexity 1 178 0 400 98 0 122 chr5 201689661 201689866 -1395666 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 * 228 116 47 0 chr5 201689986 201690029 -1395503 - L2 LINE L2 -3 3310 3266 1959 262 95 29 chr5 201690814 201691665 -1393867 - L1MC4 LINE L1 -1 8041 7135 1596 115 138 63 chr5 201692042 201692112 -1393420 - THE1C LTR MaLR 0 375 312 2343 113 3 0 chr5 201692112 201692423 -1393109 + AluSx SINE Alu 1 312 0 1596 115 138 63 chr5 201692423 201692699 -1392833 - THE1C LTR MaLR -63 312 3 2604 50 0 0 chr5 201693200 201693498 -1392034 + AluY SINE Alu 1 298 -13 1916 101 0 75 chr5 201695083 201695401 -1390131 - AluSc SINE Alu -15 294 1 204 276 31 71 chr5 201695625 201695723 -1389809 - L3 LINE CR1 -295 1282 1189 32 0 0 0 chr5 201695723 201695755 -1389777 + AT_rich Low_complexity Low_complexity 1 32 0 912 267 157 20 chr5 201695810 201696211 -1389321 - L1MC4 LINE L1 -151 7891 7436 2991 152 32 102 chr5 201696465 201697180 -1388352 + L1MC3 LINE L1 6418 7082 -703 542 155 35 147 chr5 201747249 201747481 -1338051 + MLT1A1 LTR MaLR 160 365 0 4168 223 44 12 chr5 201747498 201747823 -1337709 - L1MDa LINE L1 -2526 4014 3701 3123 168 178 3 chr5 201747823 201748167 -1337365 - MER44D DNA MER2_type -1882 605 322 2403 70 0 0 chr5 201748167 201748469 -1337063 + AluY SINE Alu 2 303 -8 2392 80 0 0 chr5 201748471 201748773 -1336759 + AluSx SINE Alu 1 302 -10 3123 168 178 3 chr5 201748773 201749049 -1336483 - MER44D DNA MER2_type -2165 322 1 4168 223 44 12 chr5 201749049 201750298 -1335234 - L1MDa LINE L1 -2839 3701 2390 2569 173 28 51 chr5 201750278 201750485 -1335047 - L1MDa LINE L1 -4606 1934 1724 * 1881 158 0 40 chr5 201750485 201750807 -1334725 - AluSx SINE Alu -3 309 1 2569 173 28 51 chr5 201750807 201751077 -1334455 - L1MDa LINE L1 -4816 1724 1475 2216 120 0 0 chr5 201751077 201751386 -1334146 - AluY SINE Alu -2 309 1 2569 173 28 51 chr5 201751386 201751599 -1333933 - L1MDa LINE L1 -5065 1475 1259 230 269 204 0 chr5 201751822 201751915 -1333617 + L2 LINE L2 3202 3313 0 2481 53 0 7 chr5 201752060 201752364 -1333168 + AluY SINE Alu 1 302 -9 1832 197 61 31 chr5 201752365 201752941 -1332591 + MLT1D LTR MaLR 6 626 0 209 350 60 0 chr5 201752992 201753092 -1332440 - MIR SINE MIR -78 184 79 189 0 0 0 chr5 201753278 201753299 -1332233 + (T)n Simple_repeat Simple_repeat 1 21 0 2150 118 0 0 chr5 201753705 201754002 -1331530 - AluSg SINE Alu -12 298 2 204 211 96 0 chr5 201754005 201754057 -1331475 - MIR SINE MIR -99 163 107 223 243 9 112 chr5 201755369 201755476 -1330056 - MIR SINE MIR -63 145 50 238 129 10 119 chr5 201755741 201755942 -1329590 + (CGGA)n Simple_repeat Simple_repeat 2 180 0 389 178 40 52 chr5 201755954 201756284 -1329248 + (CGGA)n Simple_repeat Simple_repeat 1 325 0 386 180 42 11 chr5 201756293 201756557 -1328975 + (TGGA)n Simple_repeat Simple_repeat 1 272 0 295 195 39 13 chr5 201756575 201756652 -1328880 - L2 LINE L2 -180 3092 3014 1948 82 4 4 chr5 201757685 201757941 -1327591 - AluSg SINE Alu -20 290 35 27 0 0 0 chr5 201757947 201757974 -1327558 + AT_rich Low_complexity Low_complexity 1 27 0 581 282 79 22 chr5 201758288 201758515 -1327017 - MIR SINE MIR -14 248 9 230 235 20 0 chr5 201759089 201759140 -1326392 + CT-rich Low_complexity Low_complexity 1 52 0 443 351 43 0 chr5 201759522 201759710 -1325822 + MIR SINE MIR 21 216 -46 2301 100 0 0 chr5 201760373 201760674 -1324858 + AluSx SINE Alu 1 301 -11 714 318 189 19 chr5 201760720 201761185 -1324347 + L3 LINE CR1 957 1500 -77 2450 48 0 0 chr5 201763979 201764274 -1321258 - AluY SINE Alu -16 295 1 315 0 0 0 chr5 201764299 201764334 -1321198 + (CA)n Simple_repeat Simple_repeat 1 35 0 1837 247 84 18 chr5 201764337 201764896 -1320636 - MER82 DNA MER2_type -8 645 50 2328 103 0 0 chr5 201765113 201765425 -1320107 + AluSq SINE Alu 1 312 -1 376 287 106 35 chr5 201765622 201765904 -1319628 + L1M4 LINE L1 2207 2508 -3638 980 276 71 5 chr5 201766096 201766690 -1318842 + L1M4 LINE L1 2845 3477 -2669 1069 59 0 0 chr5 201766774 201766910 -1318622 + AluY SINE Alu 170 305 -6 794 263 97 82 chr5 201766912 201767196 -1318336 + L1M4 LINE L1 3520 3798 -2348 2052 135 3 0 chr5 201767196 201767500 -1318032 + AluSq SINE Alu 1 305 -8 1894 164 0 3 chr5 201767503 201767815 -1317717 + AluJb SINE Alu 1 311 -1 794 263 97 82 chr5 201767815 201768146 -1317386 + L1M4 LINE L1 3799 4148 -1998 2299 74 3 14 chr5 201768153 201768450 -1317082 + AluSp SINE Alu 1 294 -19 509 144 81 0 chr5 201768453 201768564 -1316968 + Charlie1 DNA MER1_type 2637 2756 -5 281 264 64 16 chr5 201768566 201768691 -1316841 + L1ME LINE L1 5646 5776 -386 2361 61 3 0 chr5 201768774 201769070 -1316462 + AluY SINE Alu 1 297 -14 578 311 130 37 chr5 201769160 201769674 -1315858 - L1MC4a LINE L1 -1851 5957 5396 426 235 201 0 chr5 201770640 201770819 -1314713 + MIR SINE MIR 12 226 -36 281 350 43 0 chr5 201772683 201772800 -1312732 - L2 LINE L2 -16 3297 3176 184 311 176 0 chr5 201773100 201773293 -1312239 + L2 LINE L2 1730 1956 -1358 369 319 161 7 chr5 201773596 201773869 -1311663 + L2 LINE L2 2439 2753 -561 2374 73 3 0 chr5 201775336 201775636 -1309896 + AluSg SINE Alu 1 301 -9 391 189 78 0 chr5 201776082 201776172 -1309360 - MIR SINE MIR -87 175 79 263 305 66 20 chr5 201776252 201776449 -1309083 + L1MC5 LINE L1 7708 7913 -48 400 271 42 25 chr5 201776572 201776754 -1308778 - MIR SINE MIR -67 141 2 233 316 45 15 chr5 201777262 201777395 -1308137 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 777 199 0 0 chr5 201777523 201778000 -1307532 + (CCCA)n Simple_repeat Simple_repeat 1 477 0 548 234 6 0 chr5 201778027 201778194 -1307338 + (CCCA)n Simple_repeat Simple_repeat 2 169 0 298 329 19 13 chr5 201778198 201778353 -1307179 + (TCCA)n Simple_repeat Simple_repeat 4 159 0 258 197 13 40 chr5 201778500 201778576 -1306956 + GA-rich Low_complexity Low_complexity 2 75 0 247 333 54 18 chr5 201778955 201779066 -1306466 - MIR SINE MIR -87 175 61 241 308 133 26 chr5 201780179 201780569 -1304963 + MLT1K LTR MaLR 132 563 -25 225 318 106 15 chr5 201780758 201780890 -1304642 + MIR SINE MIR 27 170 -92 360 266 96 48 chr5 201781749 201781937 -1303595 + MLT1K LTR MaLR 160 356 -232 356 255 161 13 chr5 201782035 201782329 -1303203 + L2 LINE L2 2758 3085 -187 545 291 54 31 chr5 201784404 201784662 -1300870 - L1MC4a LINE L1 -1777 6267 6004 * 1591 225 71 2 chr5 201784644 201785090 -1300442 + L1MB3 LINE L1 5693 6173 -10 1571 116 36 0 chr5 201785092 201785316 -1300216 - AluSc SINE Alu -15 294 63 315 357 84 53 chr5 201785630 201785952 -1299580 + L1ME LINE L1 5435 5766 -355 1393 163 0 13 chr5 201787793 201788026 -1297506 + AluJo SINE Alu 70 299 -13 2196 145 58 28 chr5 201788031 201788480 -1297052 - L1MB3 LINE L1 -16 6167 5547 2222 84 16 16 chr5 201788480 201788791 -1296741 - AluSx SINE Alu -1 311 1 2196 145 58 28 chr5 201788791 201789030 -1296502 - L1MB3 LINE L1 -636 5547 5317 253 280 75 0 chr5 201789070 201789177 -1296355 - LTR50 LTR ERVL -169 626 512 1127 228 0 14 chr5 201789235 201789524 -1296008 - L1MC4a LINE L1 -813 5569 5285 1640 144 46 28 chr5 201789524 201789808 -1295724 - AluSx SINE Alu -23 289 1 6739 192 55 65 chr5 201789808 201791265 -1294267 - L1MC4a LINE L1 -2120 4262 2792 239 132 0 0 chr5 201791265 201791303 -1294229 + tRNA-Phe-TTC tRNA tRNA 1 38 -38 6739 192 55 65 chr5 201791303 201792446 -1293086 - L1MC4a LINE L1 -3590 2792 1639 2403 99 0 22 chr5 201792446 201792758 -1292774 - AluSc SINE Alu -1 308 4 6739 192 55 65 chr5 201792758 201792814 -1292718 - L1MC4a LINE L1 -4743 1639 1584 217 0 0 0 chr5 201792814 201792838 -1292694 + (TTTTG)n Simple_repeat Simple_repeat 2 155 0 2238 92 0 11 chr5 201792838 201793122 -1292410 - AluSc SINE Alu -28 281 1 6739 192 55 65 chr5 201793122 201793916 -1291616 - L1MC4a LINE L1 -4797 1585 784 908 88 26 0 chr5 201793916 201794030 -1291502 + AluSp SINE Alu 1 117 -196 10625 25 8 0 chr5 201794030 201796094 -1289438 + L1PA4 LINE L1 4086 6155 0 1592 74 5 5 chr5 201796099 201796301 -1289231 + AluSq SINE Alu 104 305 -8 6739 192 55 65 chr5 201796301 201796957 -1288575 - L1MC4a LINE L1 -5601 781 9 354 298 229 5 chr5 201797013 201797218 -1288314 - L1M4 LINE L1 -1827 4319 4069 217 317 33 47 chr5 201797805 201797951 -1287581 - MIR SINE MIR -60 202 54 2426 77 0 3 chr5 201797951 201798248 -1287284 - AluY SINE Alu -15 296 1 217 317 33 47 chr5 201798248 201798279 -1287253 - MIR SINE MIR -208 54 24 5910 133 41 22 chr5 201799833 201799855 -1285677 + L1MC1 LINE L1 5254 5274 -1059 1996 149 3 13 chr5 201799855 201800163 -1285369 + AluJb SINE Alu 1 305 -7 5910 133 41 22 chr5 201800163 201800707 -1284825 + L1MC1 LINE L1 5274 5852 -481 2514 70 3 22 chr5 201800707 201801019 -1284513 + AluSp SINE Alu 1 306 -7 5910 133 41 22 chr5 201801019 201801506 -1284026 + L1MC1 LINE L1 5852 6328 -5 2444 254 145 33 chr5 201801569 201801948 -1283584 - HAL1 LINE L1 -628 1879 1544 583 200 9 17 chr5 201801948 201802063 -1283469 - MER81 DNA DNA 0 114 1 2444 254 145 33 chr5 201802063 201802493 -1283039 - HAL1 LINE L1 -963 1544 1163 2253 111 3 16 chr5 201802493 201802809 -1282723 - AluSx SINE Alu 0 312 1 2444 254 145 33 chr5 201802809 201803047 -1282485 - HAL1 LINE L1 -1344 1163 714 4561 235 62 68 chr5 201806062 201807761 -1277771 - L1MDa LINE L1 -1462 4944 3256 353 100 0 0 chr5 201807761 201807821 -1277711 - L1MA7 LINE L1 -6 6285 6226 4561 235 62 68 chr5 201807821 201807958 -1277574 - L1MDa LINE L1 -3150 3256 3120 2973 221 79 49 chr5 201808113 201808172 -1277360 - L1MDa LINE L1 -4081 2325 2269 2583 75 0 0 chr5 201808172 201808478 -1277054 - AluY SINE Alu -5 306 1 2973 221 79 49 chr5 201808478 201808939 -1276593 - L1MDa LINE L1 -4137 2269 1823 2449 95 0 3 chr5 201808939 201809245 -1276287 - AluSq SINE Alu -8 305 1 2973 221 79 49 chr5 201809245 201809802 -1275730 - L1MDa LINE L1 -4583 1823 1215 671 132 9 0 chr5 201809812 201809959 -1275573 + AluSg/x SINE Alu 176 323 0 1100 259 30 50 chr5 201809959 201810400 -1275132 - L1MDa LINE L1 -5196 1213 782 214 50 50 0 chr5 201810537 201810577 -1274955 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 2343 96 3 10 chr5 201810578 201810890 -1274642 + AluSp SINE Alu 1 310 -3 453 227 65 0 chr5 201811564 201811718 -1273814 - MER113 DNA MER1_type? -293 228 65 183 163 70 128 chr5 201811725 201811811 -1273721 + L2 LINE L2 2888 2968 -346 253 294 43 33 chr5 201815606 201815698 -1269834 + Charlie8 DNA MER1_type 140 232 -2185 2466 68 7 16 chr5 201816042 201816351 -1269181 + AluSg SINE Alu 1 306 -4 741 214 0 0 chr5 201816803 201817053 -1268479 + (TG)n Simple_repeat Simple_repeat 1 250 0 182 279 0 59 chr5 201817221 201817289 -1268243 - MIR SINE MIR -67 141 78 200 197 6 19 chr5 201817713 201817767 -1267765 + MER5B DNA MER1_type 34 99 -90 2260 67 39 0 chr5 201818116 201818400 -1267132 + AluY SINE Alu 1 295 -16 2648 50 0 0 chr5 201818955 201819254 -1266278 - AluY SINE Alu -12 299 1 782 245 152 43 chr5 201820065 201820364 -1265168 + MLT1K LTR MaLR 143 408 -180 2161 97 10 42 chr5 201820364 201820672 -1264860 - AluSc SINE Alu -11 298 1 2340 112 3 0 chr5 201820675 201820978 -1264554 - AluSx SINE Alu -8 304 1 782 245 152 43 chr5 201820978 201821070 -1264462 + MLT1K LTR MaLR 409 581 -7 590 265 47 0 chr5 201823123 201823293 -1262239 - L1ME3A LINE L1 -2 6168 5991 467 238 105 33 chr5 201823606 201823743 -1261789 + L1ME LINE L1 1788 1947 -4449 1373 223 127 10 chr5 201823743 201823869 -1261663 + MLT1C LTR MaLR 1 111 -356 219 69 0 0 chr5 201823869 201823898 -1261634 + (GAGTG)n Simple_repeat Simple_repeat 4 32 0 1373 223 127 10 chr5 201823898 201824189 -1261343 + MLT1C LTR MaLR 111 467 0 467 238 105 33 chr5 201824189 201824261 -1261271 + L1ME LINE L1 1947 2012 -4384 1942 88 168 162 chr5 201824270 201824320 -1261212 - LTR12 LTR ERV1 -142 2017 1969 2750 32 0 6 chr5 201824320 201824633 -1260899 + AluY SINE Alu 1 311 0 1942 88 168 162 chr5 201824633 201825172 -1260360 - LTR12 LTR ERV1 -190 1969 57 258 231 0 0 chr5 201825172 201825224 -1260308 - LTR30 LTR ERV1 -670 52 1 1424 202 164 15 chr5 201825254 201825773 -1259759 + MLT1E1 LTR MaLR 1 654 0 1058 200 77 99 chr5 201825783 201825940 -1259592 + L1ME LINE L1 2058 2217 -3998 2097 118 11 0 chr5 201825940 201826251 -1259281 + AluSp SINE Alu 1 314 0 1058 200 77 99 chr5 201826251 201826287 -1259245 + L1ME LINE L1 2217 2252 -3963 2032 124 29 0 chr5 201826287 201826601 -1258931 + AluSx SINE Alu 1 322 0 1058 200 77 99 chr5 201826601 201826686 -1258846 + L1ME LINE L1 2252 2337 -3878 2370 106 0 6 chr5 201826686 201826997 -1258535 + AluSx SINE Alu 1 309 -3 1058 200 77 99 chr5 201826997 201827403 -1258129 + L1ME LINE L1 2337 2669 -3546 2472 62 3 0 chr5 201827404 201827693 -1257839 + AluY SINE Alu 1 290 -21 2177 134 0 0 chr5 201827695 201828033 -1257499 + AluSq SINE Alu 1 313 0 477 258 50 0 chr5 201828033 201828192 -1257340 + L1ME LINE L1 3418 3584 -2631 1854 163 13 10 chr5 201828200 201828507 -1257025 + AluJb SINE Alu 1 308 -4 3818 204 58 52 chr5 201828507 201829067 -1256465 + L1MB5 LINE L1 4152 4707 -1536 1798 118 76 4 chr5 201829067 201829367 -1256165 + AluSx SINE Alu 1 319 0 3818 204 58 52 chr5 201829367 201830805 -1254727 + L1MB5 LINE L1 4707 6161 -82 3434 229 82 52 chr5 201830799 201831052 -1254480 + L1ME LINE L1 3915 4159 -2076 * 1432 95 27 9 chr5 201831052 201831273 -1254259 - L1PA16 LINE L1 0 6166 5942 3434 229 82 52 chr5 201831273 201832033 -1253499 + L1ME LINE L1 4159 4894 -1341 2468 83 0 7 chr5 201832033 201832334 -1253198 + AluSq SINE Alu 11 309 -4 3434 229 82 52 chr5 201832334 201832452 -1253080 + L1ME LINE L1 4894 5007 -1228 1626 166 43 30 chr5 201832452 201832591 -1252941 + AluJo SINE Alu 1 137 -175 2587 27 0 10 chr5 201832591 201832913 -1252619 + AluY SINE Alu 1 319 0 1626 166 43 30 chr5 201832913 201833073 -1252459 + AluJo SINE Alu 137 305 -7 3434 229 82 52 chr5 201833073 201833738 -1251794 + L1ME LINE L1 5007 5770 -465 2581 50 0 0 chr5 201833738 201834038 -1251494 - AluY SINE Alu -11 300 1 3434 229 82 52 chr5 201834038 201834106 -1251426 + L1ME LINE L1 5770 5834 -401 1756 228 89 10 chr5 201834109 201834591 -1250941 - MLT1E1 LTR MaLR 0 654 135 230 240 42 52 chr5 201834640 201834736 -1250796 + L1ME LINE L1 5857 5951 -282 910 208 122 36 chr5 201834863 201835117 -1250415 + Charlie5 DNA MER1_type 2234 2465 -159 2481 81 0 7 chr5 201835117 201835427 -1250105 - AluY SINE Alu -3 308 1 2595 62 0 0 chr5 201835429 201835736 -1249796 - AluY SINE Alu -4 307 1 910 208 122 36 chr5 201835736 201835838 -1249694 + Charlie5 DNA MER1_type 2465 2624 0 345 266 35 105 chr5 201835872 201836214 -1249318 + L1MC5 LINE L1 7371 7688 -273 225 0 0 0 chr5 201836384 201836409 -1249123 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2636 38 0 16 chr5 201837864 201838177 -1247355 + AluY SINE Alu 1 308 -3 598 168 52 52 chr5 201838315 201838470 -1247062 - L1MA7 LINE L1 -1 6290 6136 * 679 273 12 93 chr5 201838444 201838603 -1246929 - L1M4 LINE L1 -2542 3604 3434 2317 106 10 3 chr5 201838603 201838914 -1246618 + AluSq SINE Alu 1 313 0 679 273 12 93 chr5 201838914 201839186 -1246346 - L1M4 LINE L1 -2712 3434 3208 284 244 74 0 chr5 201839944 201840059 -1245473 + MIR SINE MIR 17 147 -61 832 206 131 70 chr5 201840806 201841150 -1244382 - MLT1A1 LTR MaLR 0 365 1 238 279 147 21 chr5 201841580 201841770 -1243762 + L1MC4 LINE L1 7461 7674 -368 345 197 0 0 chr5 201842040 201842111 -1243421 + CT-rich Low_complexity Low_complexity 1 71 0 420 243 97 0 chr5 201842112 201842215 -1243317 - FLAM_C SINE Alu -19 114 2 2239 105 6 35 chr5 201842366 201842681 -1242851 + AluSg SINE Alu 1 306 -4 1138 146 6 0 chr5 201843243 201843414 -1242118 + FRAM SINE Alu 1 169 -7 1556 159 105 9 chr5 201843946 201844279 -1241253 + MLT1A1 LTR MaLR 1 365 0 378 293 102 30 chr5 201844624 201844996 -1240536 + HAL1b LINE L1 198 596 -752 2580 40 10 0 chr5 201844996 201845294 -1240238 - AluY SINE Alu -10 301 1 1528 246 101 80 chr5 201845408 201845984 -1239548 + MLT1E LTR MaLR 6 593 0 2319 99 7 0 chr5 201846005 201846327 -1239205 + AluSx SINE Alu 1 324 0 516 204 11 0 chr5 201846327 201846420 -1239112 + Tigger2 DNA MER2_type 2615 2708 -10 1169 173 29 21 chr5 201846422 201846665 -1238867 - L1M4 LINE L1 -371 5813 5569 249 186 0 0 chr5 201846664 201846707 -1238825 + L1MC4a LINE L1 3786 3828 -2318 * 496 294 141 39 chr5 201846765 201846912 -1238620 + L1MC4a LINE L1 3833 3964 -2182 311 0 0 25 chr5 201846912 201846952 -1238580 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 496 294 141 39 chr5 201846952 201847187 -1238345 + L1MC4a LINE L1 3964 4174 -1972 2103 139 3 0 chr5 201847187 201847504 -1238028 + AluSx SINE Alu 1 312 0 496 294 141 39 chr5 201847504 201847815 -1237717 + L1MC4a LINE L1 4174 4598 -1548 314 51 0 0 chr5 201847927 201847966 -1237566 + MER31B LTR ERV1 352 390 -76 290 149 0 0 chr5 201847938 201847985 -1237547 + MER67D LTR ERV1 432 478 -36 * 2032 120 0 24 chr5 201847985 201848314 -1237218 - AluSx SINE Alu 0 322 1 244 346 31 0 chr5 201848377 201848507 -1237025 + L1MC4a LINE L1 4791 4924 -1222 1079 244 71 24 chr5 201848645 201849133 -1236399 + L1MC4a LINE L1 5378 5923 -1885 632 206 157 38 chr5 201849148 201849415 -1236117 + L1MC4a LINE L1 5963 6261 -1547 230 306 9 19 chr5 201849477 201849585 -1235947 + L1MC4a LINE L1 6400 6506 -1302 303 192 99 15 chr5 201849682 201849816 -1235716 + L1MC5 LINE L1 6720 6963 -1079 186 111 0 0 chr5 201850318 201850345 -1235187 + L2 LINE L2 3270 3296 -17 195 192 0 14 chr5 201850943 201850988 -1234544 - MIR SINE MIR -116 146 104 210 247 54 24 chr5 201851126 201851292 -1234240 + C-rich Low_complexity Low_complexity 2 172 0 39 38 0 0 chr5 201851379 201851432 -1234100 + GC_rich Low_complexity Low_complexity 1 53 0 1773 131 232 54 chr5 201852080 201852182 -1233350 - LTR12 LTR ERV1 -234 480 397 1628 88 0 9 chr5 201852182 201852399 -1233133 + AluY SINE Alu 97 311 0 1773 131 232 54 chr5 201852399 201852701 -1232831 - LTR12 LTR ERV1 -317 397 4 354 296 80 19 chr5 201852709 201852871 -1232661 - MLT1K LTR MaLR -4 584 413 205 257 40 50 chr5 201853121 201853222 -1232310 - MIR3 SINE MIR -27 181 82 463 320 122 35 chr5 201854293 201854718 -1230814 - L2 LINE L2 -3 3310 2849 397 269 28 21 chr5 201855723 201855868 -1229664 + (TG)n Simple_repeat Simple_repeat 2 147 0 392 181 33 40 chr5 201855885 201856347 -1229185 + (TG)n Simple_repeat Simple_repeat 1 458 0 208 149 27 40 chr5 201856386 201856460 -1229072 + (TG)n Simple_repeat Simple_repeat 2 74 0 193 275 130 36 chr5 201857468 201857606 -1227926 - MER5A DNA MER1_type -4 185 35 1863 179 105 19 chr5 201857670 201858135 -1227397 + MLT1D LTR MaLR 1 505 0 250 331 38 25 chr5 201858299 201858456 -1227076 + MER5A DNA MER1_type 31 189 0 3168 232 73 14 chr5 201858907 201859274 -1226258 + MER45B DNA AcHobo 86 430 -1151 8821 191 38 4 chr5 201859274 201859535 -1225997 - L1PA15 LINE L1 0 6165 5914 2307 104 0 7 chr5 201859535 201859833 -1225699 + AluSg SINE Alu 1 296 -14 2458 65 0 3 chr5 201859833 201860154 -1225378 + AluY SINE Alu 1 320 0 8821 191 38 4 chr5 201860154 201862568 -1222964 - L1PA15 LINE L1 -250 5915 3426 3168 232 73 14 chr5 201862568 201862736 -1222796 + MER45B DNA AcHobo 430 587 -994 1644 139 64 52 chr5 201862736 201862978 -1222554 - MER7A DNA MER2_type -2692 346 99 1883 176 0 0 chr5 201862978 201863262 -1222270 - AluJo SINE Alu -28 284 1 1644 139 64 52 chr5 201863262 201863363 -1222169 - MER7A DNA MER2_type -2939 99 1 3168 232 73 14 chr5 201863363 201863728 -1221804 + MER45B DNA AcHobo 587 1040 0 2308 88 20 0 chr5 201863780 201864075 -1221457 + AluSq SINE Alu 1 301 -12 362 236 306 0 chr5 201864333 201864490 -1221042 + LTR50 LTR ERVL 2 206 -589 436 254 155 19 chr5 201864615 201864879 -1220653 + LTR50 LTR ERVL 485 784 -11 1295 202 54 52 chr5 201865622 201865689 -1219843 - MLT1B LTR MaLR -2 388 323 2626 62 0 0 chr5 201865689 201865993 -1219539 - AluY SINE Alu -7 304 1 1295 202 54 52 chr5 201865993 201866312 -1219220 - MLT1B LTR MaLR -67 323 1 626 215 40 28 chr5 201866930 201867107 -1218425 - MLT1A1 LTR MaLR -186 179 1 4162 261 43 21 chr5 201867107 201867907 -1217625 + L1MC/D LINE L1 3644 4425 -1721 2512 48 0 3 chr5 201867907 201868196 -1217336 + AluY SINE Alu 2 289 -22 4162 261 43 21 chr5 201868196 201868593 -1216939 + L1MC/D LINE L1 4425 4879 -1267 225 0 0 0 chr5 201868593 201868618 -1216914 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4162 261 43 21 chr5 201868618 201868849 -1216683 + L1MC/D LINE L1 4879 5104 -1042 380 194 31 61 chr5 201868825 201868923 -1216609 + L1MC/D LINE L1 5585 5679 -680 * 492 231 0 0 chr5 201868971 201869075 -1216457 + L1M4 LINE L1 4744 4847 -1299 1009 212 125 9 chr5 201872403 201872738 -1212794 - MLT1A2 LTR MaLR 0 374 1 203 345 127 18 chr5 201874085 201874250 -1211282 - L2 LINE L2 -451 2863 2681 1952 118 10 10 chr5 201874546 201874835 -1210697 + AluSx SINE Alu 3 291 -21 335 119 0 17 chr5 201874835 201874894 -1210638 + (GGGA)n Simple_repeat Simple_repeat 1 58 0 534 328 124 37 chr5 201875104 201875540 -1209992 - L2 LINE L2 -610 2704 2231 21 0 0 0 chr5 201876030 201876051 -1209481 + AT_rich Low_complexity Low_complexity 1 21 0 278 248 71 26 chr5 201876364 201876477 -1209055 - HAL1 LINE L1 -110 2397 2280 263 181 0 83 chr5 201877297 201877369 -1208163 - L1ME LINE L1 -304 5817 5765 2384 101 0 0 chr5 201877413 201877710 -1207822 + AluY SINE Alu 1 297 -14 300 307 43 0 chr5 201877724 201877887 -1207645 + MARNA DNA Mariner 191 360 -226 2336 101 8 11 chr5 201878024 201878380 -1207152 + THE1A LTR MaLR 1 355 0 1060 152 0 136 chr5 201878480 201878540 -1206992 + AluJo SINE Alu 87 154 -158 1855 86 19 4 chr5 201878540 201878796 -1206736 + AluSp SINE Alu 53 312 -1 1060 152 0 136 chr5 201878796 201878978 -1206554 + AluJo SINE Alu 154 296 -16 184 328 45 0 chr5 201878995 201879062 -1206470 - L3 LINE CR1 -2 1575 1506 229 342 71 31 chr5 201879089 201879285 -1206247 - L3 LINE CR1 -647 930 727 285 264 132 28 chr5 201879342 201879524 -1206008 - L2 LINE L2 -1480 1834 1634 21 0 0 0 chr5 201879564 201879585 -1205947 + AT_rich Low_complexity Low_complexity 1 21 0 264 221 30 107 chr5 201881146 201881277 -1204255 + L2 LINE L2 3188 3308 -5 279 238 69 14 chr5 201881552 201881668 -1203864 - MIR SINE MIR -7 201 82 218 174 65 0 chr5 201882111 201882157 -1203375 + L2 LINE L2 3219 3267 -5 682 148 0 41 chr5 201882887 201883056 -1202476 + (GGAA)n Simple_repeat Simple_repeat 4 165 0 1903 164 16 19 chr5 201883170 201883481 -1202051 + AluJo SINE Alu 1 310 -2 648 333 87 3 chr5 201883667 201883976 -1201556 - L2 LINE L2 -1157 2157 1823 940 261 97 67 chr5 201883976 201884068 -1201464 + L1MC4a LINE L1 5297 5385 -2423 2584 71 0 0 chr5 201884068 201884379 -1201153 + AluY SINE Alu 1 311 0 940 261 97 67 chr5 201884379 201884584 -1200948 + L1MC4a LINE L1 5385 5582 -2226 2332 93 0 7 chr5 201884584 201884886 -1200646 + AluSq SINE Alu 1 300 -13 940 261 97 67 chr5 201884886 201885124 -1200408 + L1MC4a LINE L1 5582 5849 -1959 257 255 82 0 chr5 201885226 201885324 -1200208 + HAL1 LINE L1 1701 1806 -701 1892 145 22 0 chr5 201885514 201885790 -1199742 + AluJo SINE Alu 1 282 -30 5133 214 42 20 chr5 201886162 201886223 -1199309 + L1M4b LINE L1 43 101 -6758 2480 62 7 13 chr5 201886223 201886530 -1199002 - AluSg SINE Alu -5 305 1 5133 214 42 20 chr5 201886530 201887208 -1198324 + L1M4b LINE L1 101 821 -6038 1965 152 7 3 chr5 201887208 201887504 -1198028 + AluSx SINE Alu 1 297 -15 5133 214 42 20 chr5 201887504 201887969 -1197563 + L1M4b LINE L1 821 1274 -5585 225 246 175 0 chr5 201888033 201888090 -1197442 - MER58A DNA MER1_type -34 73 7 2121 79 26 40 chr5 201888178 201888482 -1197050 + AluSx SINE Alu 1 300 -12 750 244 60 12 chr5 201889047 201889217 -1196315 + MER96B DNA MER1_type? 8 168 -249 2254 85 7 3 chr5 201889217 201889510 -1196022 - AluSg SINE Alu -16 294 1 750 244 60 12 chr5 201889510 201889683 -1195849 + MER96B DNA MER1_type? 168 415 -2 2230 107 20 0 chr5 201889716 201890015 -1195517 + AluSx SINE Alu 5 309 -3 725 186 37 32 chr5 201890045 201890233 -1195299 + L1M4 LINE L1 5593 5781 -403 3762 177 89 8 chr5 201890234 201891031 -1194501 + MER21B LTR ERV1 1 862 -1 2304 108 0 19 chr5 201891362 201891678 -1193854 - AluSx SINE Alu -2 310 1 220 339 0 0 chr5 201891679 201891738 -1193794 - MIR SINE MIR -58 150 92 1710 182 10 3 chr5 201891892 201892189 -1193343 + AluJo SINE Alu 1 299 -13 238 146 62 21 chr5 201892727 201892741 -1192791 + Alu SINE Alu 118 133 -167 2606 57 3 0 chr5 201892741 201893041 -1192491 + AluSp SINE Alu 1 301 -12 23 78 0 0 chr5 201893603 201893654 -1191878 + AT_rich Low_complexity Low_complexity 1 51 0 794 144 8 0 chr5 201893942 201894074 -1191458 + FLAM_C SINE Alu 1 133 0 244 220 0 0 chr5 201894276 201894326 -1191206 + MLT1L LTR MaLR 558 607 -8 1861 251 180 17 chr5 201894534 201895183 -1190349 - MER21B LTR ERV1 -107 756 2 686 297 48 81 chr5 201895183 201895599 -1189933 + MLT1K LTR MaLR 85 486 -102 195 242 258 0 chr5 201896208 201896274 -1189258 + L2 LINE L2 3231 3313 0 2395 86 0 10 chr5 201896467 201896771 -1188761 - AluSq SINE Alu -11 302 2 1698 163 35 42 chr5 201896844 201897157 -1188375 - AluJo SINE Alu -1 311 1 595 219 26 33 chr5 201897158 201897309 -1188223 - LTR34 LTR ERV1 -546 153 4 282 277 169 27 chr5 201897371 201897555 -1187977 - L1ME4a LINE L1 -225 5896 5687 4794 103 3 6 chr5 201898160 201898850 -1186682 + LTR12 LTR ERV1 1 688 0 267 296 82 0 chr5 201899377 201899475 -1186057 + MIR SINE MIR 48 153 -109 1954 224 61 84 chr5 201900334 201900517 -1185015 + MER21B LTR ERV1 98 284 -579 2228 104 3 0 chr5 201900517 201900806 -1184726 + AluSx SINE Alu 5 294 -18 1954 224 61 84 chr5 201900806 201901278 -1184254 + MER21B LTR ERV1 284 738 -125 510 252 66 62 chr5 201901327 201901569 -1183963 + L1ME3A LINE L1 5920 6162 -8 1108 139 171 58 chr5 201901629 201901802 -1183730 + L1MB2 LINE L1 5827 5979 -192 2288 102 3 20 chr5 201901802 201902107 -1183425 - AluSx SINE Alu -12 300 1 1108 139 171 58 chr5 201902107 201902242 -1183290 + L1MB2 LINE L1 5979 6170 -1 194 290 29 0 chr5 201902259 201902328 -1183204 + L2 LINE L2 2736 2806 -508 218 196 87 0 chr5 201902495 201902541 -1182991 + L2 LINE L2 3013 3062 -251 223 178 0 0 chr5 201902716 201902761 -1182771 + L2 LINE L2 3265 3309 -4 1281 190 8 65 chr5 201903071 201903547 -1181985 + MLT1D LTR MaLR 7 505 0 430 383 62 29 chr5 201903549 201903823 -1181709 + L3 LINE CR1 342 624 -953 237 227 21 135 chr5 201904009 201904053 -1181479 + L3 LINE CR1 651 698 -879 2427 45 7 7 chr5 201904053 201904341 -1181191 + AluY SINE Alu 20 307 -4 237 227 21 135 chr5 201904341 201904437 -1181095 + L3 LINE CR1 698 775 -802 234 349 168 33 chr5 201904449 201904643 -1180889 + L3 LINE CR1 879 1045 -532 1369 230 75 29 chr5 201904643 201905086 -1180446 - MLT1C LTR MaLR 0 467 5 1831 155 21 51 chr5 201905087 201905303 -1180229 - MLT1A1 LTR MaLR -2 363 161 2248 95 0 26 chr5 201905303 201905607 -1179925 - AluSc SINE Alu -13 296 1 1831 155 21 51 chr5 201905607 201905764 -1179768 - MLT1A1 LTR MaLR -204 161 1 234 349 168 33 chr5 201905764 201906095 -1179437 + L3 LINE CR1 1044 1566 -11 2515 80 0 6 chr5 201906626 201906937 -1178595 + AluY SINE Alu 1 309 -2 614 232 54 64 chr5 201907037 201907317 -1178215 + L1ME3A LINE L1 5317 5593 -569 1941 186 31 14 chr5 201907317 201907737 -1177795 + MLT1E2 LTR MaLR 1 427 -199 215 324 38 29 chr5 201907762 201907867 -1177665 + MIR SINE MIR 109 214 -48 479 345 125 21 chr5 201907993 201908280 -1177252 - L1MDa LINE L1 -2839 3701 3385 394 311 193 24 chr5 201909088 201909464 -1176068 - L1MDa LINE L1 -3216 3324 2887 230 255 20 0 chr5 201909572 201909670 -1175862 - L1MDa LINE L1 -3967 2573 2474 339 118 0 0 chr5 201909670 201909721 -1175811 - U2 snRNA snRNA -136 52 2 2487 71 7 0 chr5 201910178 201910474 -1175058 - AluY SINE Alu -13 298 1 358 136 291 0 chr5 201910569 201910672 -1174860 + L1MC4 LINE L1 7910 8042 0 3115 108 4 11 chr5 201911300 201911755 -1173777 - MER1A DNA MER1_type 0 529 78 299 263 71 9 chr5 201912148 201912279 -1173253 - MIR SINE MIR -19 189 40 385 223 0 53 chr5 201912312 201912406 -1173126 + MER63 DNA MER1_type 39 753 -83 323 125 0 0 chr5 201912403 201912451 -1173081 + MER63 DNA MER1_type 978 1025 -37 * 298 232 63 0 chr5 201912511 201912606 -1172926 + MER113 DNA MER1_type? 16 116 -405 24 0 0 0 chr5 201912678 201912702 -1172830 + AT_rich Low_complexity Low_complexity 1 24 0 2346 95 0 3 chr5 201912845 201913140 -1172392 - AluSx SINE Alu -18 294 1 992 237 95 26 chr5 201913501 201913881 -1171651 + L1ME3A LINE L1 5571 5976 -186 995 192 6 0 chr5 201913881 201914048 -1171484 + FRAM SINE Alu 1 166 -10 409 267 40 20 chr5 201914072 201914222 -1171310 + L1ME3A LINE L1 6010 6162 -8 3790 138 52 63 chr5 201915086 201915913 -1169619 + L1MB3 LINE L1 5357 6174 -9 425 252 62 70 chr5 201915913 201916171 -1169361 + MER113 DNA MER1_type? 129 384 -137 23 0 0 0 chr5 201916966 201916989 -1168543 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 201917199 201917235 -1168297 + GC_rich Low_complexity Low_complexity 1 36 0 54 73 0 0 chr5 201917298 201917408 -1168124 + GC_rich Low_complexity Low_complexity 1 110 0 23 0 0 0 chr5 201917672 201917695 -1167837 + GC_rich Low_complexity Low_complexity 1 23 0 1652 169 43 6 chr5 201918054 201918380 -1167152 - MER1B DNA MER1_type -1 338 1 2416 74 13 0 chr5 201918808 201919107 -1166425 + AluSg SINE Alu 1 303 -7 349 292 42 8 chr5 201919251 201919371 -1166161 + MER115 DNA AcHobo 2 125 -568 777 325 76 31 chr5 201969996 201970603 -1114929 - HERV16 LTR ERVL -2306 2690 2057 263 309 66 6 chr5 201970866 201971047 -1114485 + LTR16B LTR ERVL 1 192 -272 679 267 141 46 chr5 201971637 201971835 -1113697 + HAL1 LINE L1 605 783 -1724 2371 108 0 0 chr5 201971835 201972140 -1113392 - AluSq SINE Alu -8 305 1 679 267 141 46 chr5 201972140 201972353 -1113179 + HAL1 LINE L1 783 1055 -1452 1790 257 118 65 chr5 201972372 201972627 -1112905 + HAL1 LINE L1 1238 1478 -1029 2287 80 3 0 chr5 201972627 201972913 -1112619 + AluY SINE Alu 1 287 -24 1790 257 118 65 chr5 201972913 201973831 -1111701 + HAL1 LINE L1 1478 2474 -33 2196 108 0 30 chr5 201976618 201976923 -1108609 + AluSg SINE Alu 1 296 -14 21 36 0 0 chr5 201978207 201978235 -1107297 + AT_rich Low_complexity Low_complexity 1 28 0 400 250 0 9 chr5 201979187 201979299 -1106233 + L1MC4 LINE L1 7932 8042 0 21 0 0 0 chr5 201979523 201979544 -1105988 + AT_rich Low_complexity Low_complexity 1 21 0 682 205 45 6 chr5 201980007 201980163 -1105369 + L1MC1 LINE L1 6171 6332 -1 1727 263 197 30 chr5 201980192 201980293 -1105239 + L2 LINE L2 1716 1799 -1514 1872 120 16 54 chr5 201980293 201980609 -1104923 - AluSx SINE Alu -8 304 1 1727 263 197 30 chr5 201980609 201981576 -1103956 + L2 LINE L2 1799 3064 -249 2624 43 0 3 chr5 201981576 201981879 -1103653 - AluY SINE Alu -9 302 1 1727 263 197 30 chr5 201981879 201982178 -1103354 + L2 LINE L2 3064 3312 -1 2169 150 11 21 chr5 201983189 201983568 -1101964 + THE1C LTR MaLR 1 375 0 329 364 58 0 chr5 201983639 201983845 -1101687 + L1ME LINE L1 4885 5102 -1044 21 0 0 0 chr5 201983960 201983981 -1101551 + AT_rich Low_complexity Low_complexity 1 21 0 338 290 124 94 chr5 201983997 201984191 -1101341 + L1ME LINE L1 5337 5524 -597 2188 110 3 13 chr5 201984191 201984492 -1101040 - AluSq SINE Alu -15 298 1 643 184 32 8 chr5 201984497 201984622 -1100910 - FLAM_A SINE Alu -5 128 1 338 290 124 94 chr5 201984622 201984890 -1100642 + L1ME LINE L1 5527 5819 -302 261 217 170 9 chr5 201985009 201985115 -1100417 + HAL1b LINE L1 1218 1340 -8 2644 46 0 3 chr5 201985156 201985461 -1100071 + AluY SINE Alu 3 306 -5 230 188 22 8 chr5 201985523 201985705 -1099827 + AluJb SINE Alu 68 302 0 1521 102 156 8 chr5 201985726 201985997 -1099535 - AluSg1 SINE Alu 0 307 1 2420 68 0 0 chr5 201986419 201986713 -1098819 + AluY SINE Alu 1 294 -17 2208 99 34 0 chr5 201986731 201987023 -1098509 + AluY SINE Alu 1 302 -9 1960 150 6 31 chr5 201988442 201988762 -1096770 + AluJb SINE Alu 1 312 0 1430 145 28 0 chr5 201988812 201989067 -1096465 + L1MA8 LINE L1 6027 6288 -3 454 239 235 45 chr5 201990019 201990308 -1095224 - HAL1 LINE L1 -695 1812 1469 1326 249 130 71 chr5 201990497 201991262 -1094270 - L1ME3A LINE L1 -271 5882 5163 854 115 0 65 chr5 201991262 201991401 -1094131 - FLAM_C SINE Alu -2 131 2 1326 249 130 71 chr5 201991401 201992206 -1093326 - L1ME3A LINE L1 -990 5163 4251 * 2089 216 36 11 chr5 201992200 201992696 -1092836 + MLT1E2 LTR MaLR 137 625 -1 395 334 82 23 chr5 201992743 201993183 -1092349 - L1ME3A LINE L1 -5081 1038 573 370 266 23 50 chr5 201993869 201994014 -1091518 - MIR3 SINE MIR -54 154 15 24 32 0 0 chr5 201994056 201994087 -1091445 + AT_rich Low_complexity Low_complexity 1 31 0 27 22 0 22 chr5 201994423 201994449 -1091083 + AT_rich Low_complexity Low_complexity 1 27 -17 2348 75 7 3 chr5 201994449 201994742 -1090790 + AluSc SINE Alu 1 294 -15 27 22 0 22 chr5 201994742 201994760 -1090772 + AT_rich Low_complexity Low_complexity 27 44 0 1815 196 141 13 chr5 201995042 201995490 -1090042 - MLT1D LTR MaLR 0 505 1 2472 83 3 0 chr5 201996295 201996597 -1088935 + AluSc SINE Alu 1 303 -6 2492 74 0 3 chr5 201996962 201997260 -1088272 - AluSc SINE Alu -12 297 1 225 94 0 0 chr5 201997688 201997720 -1087812 + (A)n Simple_repeat Simple_repeat 1 32 0 229 224 0 0 chr5 201998175 201998224 -1087308 + A-rich Low_complexity Low_complexity 1 49 0 749 272 91 51 chr5 202001107 202001460 -1084072 + MLT1J LTR MaLR 21 329 -117 2176 103 28 0 chr5 202001660 202001951 -1083581 + AluSx SINE Alu 3 301 -11 28 0 0 0 chr5 202001952 202001980 -1083552 + AT_rich Low_complexity Low_complexity 1 28 0 421 334 81 13 chr5 202002509 202002892 -1082640 + L1MC4a LINE L1 5500 5908 -1900 213 121 0 0 chr5 202002906 202002939 -1082593 + (CA)n Simple_repeat Simple_repeat 2 34 0 319 188 103 77 chr5 202003155 202003272 -1082260 - MIR SINE MIR -59 203 84 801 149 0 8 chr5 202003645 202003766 -1081766 + AluJb SINE Alu 1 120 -192 195 100 0 0 chr5 202003769 202003799 -1081733 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2525 64 0 16 chr5 202003801 202004114 -1081418 + AluY SINE Alu 1 308 -3 2681 55 3 0 chr5 202004138 202004448 -1081084 - AluY SINE Alu 0 311 1 1868 208 41 107 chr5 202004807 202005417 -1080115 + L1MD2 LINE L1 5655 6224 -18 338 295 154 72 chr5 202005595 202005927 -1079605 + L2 LINE L2 2905 3263 -9 1014 229 53 26 chr5 202006147 202006488 -1079044 + L1MC5 LINE L1 7313 7662 -299 350 243 157 38 chr5 202006765 202006950 -1078582 + L1MC5 LINE L1 7729 7935 -26 1820 158 3 14 chr5 202007872 202008163 -1077369 - AluJo SINE Alu -24 288 1 277 331 35 35 chr5 202008440 202008585 -1076947 + L2 LINE L2 3127 3271 -1 863 281 114 30 chr5 202008798 202009235 -1076297 - L2 LINE L2 0 3313 2840 227 294 92 0 chr5 202009409 202009528 -1076004 - MIR SINE MIR -48 214 85 198 71 0 0 chr5 202009879 202009907 -1075625 + (CAGGG)n Simple_repeat Simple_repeat 2 29 0 198 28 125 28 chr5 202009977 202010049 -1075483 + (CACAG)n Simple_repeat Simple_repeat 1 79 0 22 56 0 0 chr5 202010242 202010278 -1075254 + GC_rich Low_complexity Low_complexity 1 36 0 2474 77 6 6 chr5 202010880 202011192 -1074340 + AluSx SINE Alu 1 312 0 2132 130 3 3 chr5 202012012 202012311 -1073221 + AluSq SINE Alu 6 304 -9 2061 131 98 35 chr5 202012985 202013383 -1072149 + MSTC LTR MaLR 6 428 0 185 247 104 13 chr5 202013503 202013580 -1071952 + MIR SINE MIR 42 125 -137 755 272 165 30 chr5 202014113 202014573 -1070959 + HAL1 LINE L1 500 1021 -1486 1156 188 67 0 chr5 202014578 202014818 -1070714 + L1MC3 LINE L1 6601 6856 -929 261 0 0 0 chr5 202014820 202014849 -1070683 + (CA)n Simple_repeat Simple_repeat 2 30 0 255 212 9 0 chr5 202014929 202015048 -1070484 + (CA)n Simple_repeat Simple_repeat 1 120 0 743 182 127 0 chr5 202015048 202015229 -1070303 + L1MC3 LINE L1 6862 7065 -720 2427 78 3 28 chr5 202015231 202015532 -1070000 + AluY SINE Alu 1 295 -16 189 0 0 0 chr5 202015532 202015553 -1069979 + (TA)n Simple_repeat Simple_repeat 2 22 0 2427 78 3 28 chr5 202015553 202015570 -1069962 + AluY SINE Alu 295 311 0 1444 251 161 34 chr5 202015570 202016081 -1069451 + HAL1 LINE L1 1062 1507 -1000 1776 155 36 25 chr5 202016081 202016442 -1069090 + MLT1A1 LTR MaLR 1 365 0 1444 251 161 34 chr5 202016442 202016535 -1068997 + HAL1 LINE L1 1507 1587 -920 2170 105 4 0 chr5 202016535 202016811 -1068721 + AluSc SINE Alu 1 277 -32 189 74 0 0 chr5 202016814 202016841 -1068691 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1444 251 161 34 chr5 202016841 202016957 -1068575 + HAL1 LINE L1 1588 1879 -628 213 250 0 0 chr5 202019863 202019915 -1065617 - L2 LINE L2 -1 3271 3220 2405 81 10 0 chr5 202020083 202020379 -1065153 + AluY SINE Alu 1 299 -12 375 308 143 46 chr5 202020931 202021022 -1064510 - L2 LINE L2 -85 3228 3147 2583 44 0 3 chr5 202021022 202021320 -1064212 + AluY SINE Alu 1 297 -14 375 308 143 46 chr5 202021320 202021706 -1063826 - L2 LINE L2 -166 3147 2673 1330 264 66 54 chr5 202021922 202022512 -1063020 + MER21B LTR ERV1 98 694 -169 2241 113 0 10 chr5 202024044 202024354 -1061178 - AluSx SINE Alu 0 312 6 211 290 110 0 chr5 202024717 202024817 -1060715 - L2 LINE L2 -24 3248 3138 211 290 110 0 chr5 202025174 202025274 -1060258 + L2 LINE L2 3138 3248 -24 185 0 0 39 chr5 202025382 202025408 -1060124 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 245 242 0 45 chr5 202025766 202025832 -1059700 - MIR SINE MIR -92 170 108 576 131 14 131 chr5 202025923 202026068 -1059464 - Charlie1 DNA MER1_type 0 2761 2634 1262 49 0 0 chr5 202026068 202026211 -1059321 + AluYb8 SINE Alu 1 143 -175 2518 84 0 0 chr5 202026212 202026523 -1059009 + AluY SINE Alu 1 311 0 2431 219 168 61 chr5 202026523 202027111 -1058421 - Charlie1 DNA MER1_type -113 2648 2124 2227 104 0 13 chr5 202027111 202027409 -1058123 - AluSg SINE Alu -16 294 1 2431 219 168 61 chr5 202027409 202027661 -1057871 - Charlie1 DNA MER1_type -637 2124 1900 2184 111 31 0 chr5 202027661 202027949 -1057583 - AluSq SINE Alu -16 297 1 2431 219 168 61 chr5 202027949 202028054 -1057478 - Charlie1 DNA MER1_type -861 1900 1808 2508 75 0 0 chr5 202028054 202028347 -1057185 - AluY SINE Alu -18 293 1 2419 87 0 0 chr5 202028347 202028635 -1056897 - AluSq SINE Alu -20 293 6 2431 219 168 61 chr5 202028635 202028650 -1056882 - Charlie1 DNA MER1_type -953 1808 1796 2387 97 0 0 chr5 202028650 202028948 -1056584 - AluSx SINE Alu -14 298 1 2431 219 168 61 chr5 202028948 202029197 -1056335 - Charlie1 DNA MER1_type -965 1796 1 571 325 86 19 chr5 202029800 202030264 -1055268 - L2 LINE L2 0 3313 2819 326 131 0 101 chr5 202030266 202030464 -1055068 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 1483 127 64 50 chr5 202030835 202030996 -1054536 - AluJb SINE Alu -20 292 135 186 43 0 0 chr5 202030996 202031019 -1054513 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2320 92 0 0 chr5 202031022 202031314 -1054218 - AluSx SINE Alu -20 292 1 1483 127 64 50 chr5 202031314 202031431 -1054101 - AluJb SINE Alu -178 134 6 243 287 33 16 chr5 202031438 202031547 -1053985 + L1M4c LINE L1 914 1027 -5357 2662 42 3 0 chr5 202031547 202031857 -1053675 + AluY SINE Alu 1 311 0 243 287 33 16 chr5 202031857 202031869 -1053663 + L1M4c LINE L1 1027 1037 -5347 201 211 0 0 chr5 202031888 202031940 -1053592 + G-rich Low_complexity Low_complexity 4 55 0 250 261 96 70 chr5 202032407 202032522 -1053010 - MIR SINE MIR -71 191 74 2725 39 0 3 chr5 202033407 202033715 -1051817 - AluY SINE Alu -4 307 1 257 194 28 42 chr5 202033738 202033810 -1051722 + L1MC5 LINE L1 7711 7781 -180 207 287 43 21 chr5 202035452 202035546 -1049986 - MIR SINE MIR -98 164 69 2771 20 0 0 chr5 202035715 202036015 -1049517 + AluYa5 SINE Alu 1 300 -11 462 330 6 17 chr5 202036470 202036646 -1048886 - L2 LINE L2 -505 2809 2636 648 250 52 20 chr5 202037357 202037605 -1047927 - L1MC5 LINE L1 -158 7803 7548 * 720 212 95 8 chr5 202037602 202037843 -1047689 + L1MC5 LINE L1 6975 7236 -725 868 138 48 21 chr5 202037945 202038134 -1047398 + L1MC5 LINE L1 7250 7443 -518 2589 53 0 0 chr5 202038228 202038529 -1047003 - AluY SINE Alu -10 301 1 2217 99 21 0 chr5 202038728 202039012 -1046520 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr5 202039576 202039598 -1045934 + AT_rich Low_complexity Low_complexity 1 22 0 331 324 49 36 chr5 202039614 202039839 -1045693 + MIR SINE MIR 5 232 -30 2400 46 0 14 chr5 202039999 202040324 -1045208 - AluY SINE Alu 0 321 1 607 128 0 37 chr5 202040445 202040554 -1044978 + FLAM_A SINE Alu 32 136 -6 383 296 64 23 chr5 202040554 202040726 -1044806 - L1M4 LINE L1 -1603 4543 4365 1424 78 47 0 chr5 202040945 202041137 -1044395 + AluY SINE Alu 111 311 0 231 206 14 14 chr5 202041148 202041221 -1044311 - HsTC2 DNA Tc2 -1 1897 1825 204 40 0 0 chr5 202041605 202041630 -1043902 + (TC)n Simple_repeat Simple_repeat 2 26 0 530 277 35 48 chr5 202041806 202042037 -1043495 - Charlie8 DNA MER1_type -2137 280 53 2087 99 0 7 chr5 202043823 202044133 -1041399 + AluSg SINE Alu 1 308 0 211 252 196 0 chr5 202045309 202045416 -1040116 + L2 LINE L2 3125 3252 -20 259 256 162 34 chr5 202045644 202045761 -1039771 + L2 LINE L2 3141 3272 0 563 153 54 0 chr5 202045951 202046062 -1039470 + MER69 DNA AcHobo 2407 2523 -3 325 301 43 62 chr5 202046088 202046297 -1039235 + Charlie8 DNA MER1_type 76 280 -2137 306 297 138 14 chr5 202046820 202046958 -1038574 + MIR SINE MIR 46 200 -62 207 224 0 61 chr5 202047059 202047108 -1038424 - MIR SINE MIR -124 84 39 219 261 51 116 chr5 202047956 202048118 -1037414 + L2 LINE L2 1546 1692 -1622 2143 118 0 7 chr5 202048118 202048414 -1037118 + AluSx SINE Alu 1 294 -18 219 261 51 116 chr5 202048414 202048466 -1037066 + L2 LINE L2 1692 1746 -1568 292 183 148 70 chr5 202050065 202050207 -1035325 + Charlie8 DNA MER1_type 37 189 -2228 295 342 7 34 chr5 202050423 202050572 -1034960 - HAL1b LINE L1 -922 426 282 2142 119 0 19 chr5 202050602 202050920 -1034612 - AluSx SINE Alu 0 312 1 197 33 33 0 chr5 202051158 202051188 -1034344 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2502 68 0 0 chr5 202051303 202051614 -1033918 - AluY SINE Alu 0 311 1 373 278 28 69 chr5 202053086 202053302 -1032230 - MER102a DNA MER1_type -31 299 93 407 259 14 27 chr5 202054184 202054331 -1031201 + MER113 DNA MER1_type? 59 203 -318 376 384 26 17 chr5 202055126 202055253 -1030279 + L1ME4a LINE L1 5719 5850 -271 2402 70 3 0 chr5 202055253 202055552 -1029980 + AluY SINE Alu 1 300 -11 376 384 26 17 chr5 202055552 202055656 -1029876 + L1ME4a LINE L1 5850 5952 -169 609 278 19 51 chr5 202055729 202055945 -1029587 - L1MA10 LINE L1 0 6334 6126 1235 188 90 0 chr5 202055945 202056190 -1029342 + AluJo SINE Alu 1 267 -45 475 266 0 8 chr5 202056202 202056330 -1029202 - L1MB1 LINE L1 -44 6145 6019 2360 76 3 0 chr5 202057178 202057481 -1028051 + AluSx SINE Alu 1 304 -8 1695 182 26 66 chr5 202058057 202058274 -1027258 - MLT1A1 LTR MaLR 0 365 141 2406 80 3 0 chr5 202058274 202058586 -1026946 - AluSp SINE Alu 0 313 1 2353 73 0 10 chr5 202058592 202058894 -1026638 - AluY SINE Alu -12 299 1 1695 182 26 66 chr5 202058894 202059049 -1026483 - MLT1A1 LTR MaLR -229 136 1 2358 108 76 15 chr5 202060000 202060343 -1025189 + THE1B LTR MaLR 1 364 0 442 200 52 9 chr5 202060365 202060480 -1025052 - L1MB8 LINE L1 -2 6176 6057 979 168 0 6 chr5 202060488 202060655 -1024877 - AluJb SINE Alu -10 302 137 2123 124 0 7 chr5 202060706 202061012 -1024520 + AluSg SINE Alu 7 310 0 329 264 45 9 chr5 202061922 202062032 -1023500 + L1ME LINE L1 5538 5651 -470 312 320 26 65 chr5 202063059 202063212 -1022320 + MIR SINE MIR 20 166 -96 601 296 58 5 chr5 202063626 202063832 -1021700 + L2 LINE L2 3097 3313 0 2316 87 3 3 chr5 202066813 202067122 -1018410 - AluSc SINE Alu 0 309 1 22 35 0 0 chr5 202067198 202067227 -1018305 + AT_rich Low_complexity Low_complexity 1 29 0 986 193 0 0 chr5 202067245 202067406 -1018126 + FRAM SINE Alu 3 163 -3 937 239 32 2 chr5 202067617 202067874 -1017658 + MLT1D LTR MaLR 278 505 0 402 212 41 27 chr5 202068321 202068467 -1017065 - Charlie8 DNA MER1_type -2230 187 40 190 233 23 0 chr5 202069053 202069096 -1016436 + MIR SINE MIR 108 151 -57 732 208 182 35 chr5 202069115 202069456 -1016076 + MER113 DNA MER1_type? 33 423 -98 180 0 0 0 chr5 202070422 202070442 -1015090 + (A)n Simple_repeat Simple_repeat 1 20 0 272 331 45 19 chr5 202071726 202071883 -1013649 + MIR SINE MIR 22 182 -80 253 312 29 94 chr5 202072768 202073044 -1012488 - L2 LINE L2 -21 3251 2994 840 153 40 130 chr5 202073479 202073640 -1011892 + AluJo SINE Alu 1 138 -174 1711 156 10 27 chr5 202073640 202073941 -1011591 + AluJb SINE Alu 2 297 -15 840 153 40 130 chr5 202073941 202074002 -1011530 + AluJo SINE Alu 138 203 -109 582 247 83 73 chr5 202074056 202074356 -1011176 + MLT1K LTR MaLR 280 582 -6 276 100 0 0 chr5 202075581 202075621 -1009911 + (A)n Simple_repeat Simple_repeat 1 40 0 1704 130 58 11 chr5 202076049 202076325 -1009207 - AluSq SINE Alu -18 295 7 1651 162 46 12 chr5 202076802 202077147 -1008385 + MLT1A1 LTR MaLR 2 358 -7 266 309 100 0 chr5 202077341 202077451 -1008081 - L2 LINE L2 -1 3271 3151 387 0 0 0 chr5 202077467 202077510 -1008022 + (CA)n Simple_repeat Simple_repeat 2 44 0 2031 131 6 6 chr5 202077642 202077954 -1007578 + AluSx SINE Alu 1 312 0 241 65 0 43 chr5 202077962 202078008 -1007524 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 696 164 31 0 chr5 202078118 202078246 -1007286 - LTR12 LTR ERV1 -228 486 355 233 270 0 0 chr5 202078246 202078320 -1007212 - LTR30 LTR ERV1 -102 620 547 834 166 94 72 chr5 202078321 202078598 -1006934 - LTR12 LTR ERV1 -431 283 1 411 189 14 101 chr5 202079053 202079201 -1006331 - MER58C DNA MER1_type -54 161 27 2326 38 7 14 chr5 202079335 202079624 -1005908 - AluY SINE Alu -24 287 1 475 244 89 6 chr5 202080212 202080380 -1005152 + LTR33 LTR ERVL 23 204 -317 483 211 19 0 chr5 202080566 202080670 -1004862 - MER81 DNA DNA -7 107 2 2241 88 0 3 chr5 202080734 202081028 -1004504 + AluSg1 SINE Alu 1 293 -16 299 301 32 66 chr5 202081690 202082004 -1003528 + MLT1K LTR MaLR 38 407 -181 1847 130 0 4 chr5 202082052 202082321 -1003211 - AluJb SINE Alu -44 268 1 360 286 101 0 chr5 202083083 202083261 -1002271 - L1MC5 LINE L1 -34 7927 7732 748 164 7 20 chr5 202083261 202083413 -1002119 + Tigger1 DNA MER2_type 1 150 -2268 1012 108 12 141 chr5 202083463 202083553 -1001979 + Tigger1 DNA MER2_type 2202 2302 -116 2141 95 3 0 chr5 202083553 202083836 -1001696 + AluSg SINE Alu 1 284 -26 1012 108 12 141 chr5 202083836 202083874 -1001658 + Tigger1 DNA MER2_type 2302 2343 -75 2136 118 0 3 chr5 202083874 202084178 -1001354 - AluSx SINE Alu -9 303 1 1012 108 12 141 chr5 202084178 202084297 -1001235 + Tigger1 DNA MER2_type 2343 2418 0 252 316 47 19 chr5 202084297 202084509 -1001023 - L1MC5 LINE L1 -228 7733 7516 570 254 136 23 chr5 202084900 202084943 -1000589 + L1ME LINE L1 5518 5555 -566 1751 127 67 0 chr5 202084943 202085211 -1000321 - AluSx SINE Alu -3 309 24 570 254 136 23 chr5 202085211 202085431 -1000101 + L1ME LINE L1 5555 5811 -310 386 111 16 0 chr5 202085524 202085587 -999945 - L1MB8 LINE L1 -1 6177 6114 313 237 215 0 chr5 202085587 202085722 -999810 + L1MA9 LINE L1 6001 6164 -148 575 224 30 0 chr5 202085827 202085961 -999571 + L1MA9 LINE L1 6175 6312 0 364 234 10 1 chr5 202085963 202086059 -999473 - L1MB7 LINE L1 -53 6127 6031 2477 40 7 3 chr5 202086872 202087173 -998359 + AluY SINE Alu 1 302 -9 819 288 111 3 chr5 202087487 202087803 -997729 - MLT1K LTR MaLR -42 546 197 183 42 0 0 chr5 202087836 202087860 -997672 + (GGGTG)n Simple_repeat Simple_repeat 5 28 0 2187 104 0 7 chr5 202087926 202088224 -997308 - AluSg SINE Alu -14 296 1 188 275 101 51 chr5 202088688 202088826 -996706 - L2 LINE L2 -924 2390 2246 371 286 60 22 chr5 202088890 202089087 -996445 + MIR3 SINE MIR 28 243 -19 385 314 159 37 chr5 202090729 202090823 -994709 + L1M4 LINE L1 2739 2820 -3326 2322 74 3 13 chr5 202090823 202091134 -994398 + AluSc SINE Alu 2 309 0 385 314 159 37 chr5 202091134 202091196 -994336 + L1M4 LINE L1 2820 2873 -3273 2360 72 3 0 chr5 202091196 202091500 -994032 + AluY SINE Alu 1 305 -6 385 314 159 37 chr5 202091500 202091613 -993919 + L1M4 LINE L1 2873 3042 -3104 204 167 24 0 chr5 202091651 202091693 -993839 + L2 LINE L2 3220 3262 -51 392 287 26 9 chr5 202091887 202092002 -993530 + MER94 DNA DNA 1 117 -17 1684 179 10 3 chr5 202092178 202092475 -993057 + AluJo SINE Alu 13 311 -1 604 286 67 17 chr5 202092491 202092940 -992592 - LTR33 LTR ERVL -14 507 1 766 246 138 5 chr5 202093030 202093225 -992307 - MER58A DNA MER1_type -3 221 1 270 376 16 0 chr5 202093428 202093617 -991915 + MERVL LTR ERVL 3837 4028 -1457 181 222 0 0 chr5 202094675 202094711 -990821 - MER5C DNA MER1_type -1 323 288 2344 49 0 0 chr5 202094724 202095009 -990523 + AluY SINE Alu 24 308 -3 1042 179 38 5 chr5 202095316 202095528 -990004 - L1MA10 LINE L1 0 6334 6116 1139 134 0 0 chr5 202095533 202095697 -989835 - AluSg/x SINE Alu -20 290 127 1359 169 54 3 chr5 202095702 202095997 -989535 - L1MB1 LINE L1 -42 6126 5817 257 228 63 0 chr5 202096000 202096079 -989453 - LTR33 LTR ERVL -56 465 382 764 246 82 25 chr5 202097003 202097320 -988212 - MER113 DNA MER1_type? -141 380 46 806 240 124 69 chr5 202097428 202097865 -987667 - MLT1C LTR MaLR -1 466 6 529 316 164 23 chr5 202097944 202098371 -987161 + L2 LINE L2 2827 3313 0 297 289 132 0 chr5 202099254 202099368 -986164 + MIR SINE MIR 84 212 -50 184 346 10 10 chr5 202099713 202099814 -985718 + MIR3 SINE MIR 99 199 -9 468 273 45 6 chr5 202100675 202100851 -984681 + MLT1K LTR MaLR 398 580 -8 586 265 115 31 chr5 202101795 202102013 -983519 - MLT1J LTR MaLR -45 466 217 1814 104 8 4 chr5 202102013 202102272 -983260 + AluSc SINE Alu 1 260 -49 586 265 115 31 chr5 202102272 202102340 -983192 - MLT1J LTR MaLR -294 217 156 1804 158 7 3 chr5 202102564 202102868 -982664 + AluJo SINE Alu 3 307 -5 1911 113 7 20 chr5 202102873 202103175 -982357 + AluSq SINE Alu 4 301 -12 1785 90 56 8 chr5 202103182 202103450 -982082 + AluY SINE Alu 1 281 -30 302 336 0 40 chr5 202103702 202104051 -981481 + G-rich Low_complexity Low_complexity 1 334 0 540 227 45 38 chr5 202104163 202104582 -980950 + L1 LINE L1 3952 4477 -1669 2207 90 21 0 chr5 202104584 202104874 -980658 + AluSg SINE Alu 1 296 -14 415 165 0 0 chr5 202104874 202104953 -980579 + L1 LINE L1 4841 4919 -1227 2280 94 0 3 chr5 202104953 202105251 -980281 + AluY SINE Alu 1 297 -14 402 204 92 0 chr5 202105251 202105349 -980183 + L1ME3 LINE L1 5557 5663 -501 2192 95 3 20 chr5 202105353 202105659 -979873 + AluSx SINE Alu 1 301 -11 561 228 79 35 chr5 202105685 202105887 -979645 + L1ME3 LINE L1 5892 6102 -60 887 116 47 0 chr5 202105894 202106023 -979509 + AluSq/x SINE Alu 1 135 -177 2123 92 0 7 chr5 202106025 202106307 -979225 + AluSc SINE Alu 3 282 -27 183 42 0 0 chr5 202106307 202106331 -979201 + (CAAGA)n Simple_repeat Simple_repeat 2 25 0 1773 172 0 7 chr5 202106372 202106674 -978858 + AluJb SINE Alu 4 303 -9 25 40 0 20 chr5 202106707 202106726 -978806 + AT_rich Low_complexity Low_complexity 1 19 -30 2525 51 0 3 chr5 202106726 202107038 -978494 + AluY SINE Alu 1 311 0 25 40 0 20 chr5 202107038 202107068 -978464 + AT_rich Low_complexity Low_complexity 19 49 0 2356 70 3 10 chr5 202107073 202107386 -978146 + AluY SINE Alu 1 311 0 218 286 141 81 chr5 202108515 202108798 -976734 - L2 LINE L2 -22 3250 2951 320 292 52 19 chr5 202109593 202109747 -975785 - Charlie8 DNA MER1_type -2258 159 1 219 232 18 0 chr5 202109765 202109821 -975711 - MIR SINE MIR -62 146 90 1907 99 81 3 chr5 202110538 202110821 -974711 - AluSx SINE Alu -7 305 1 261 333 149 12 chr5 202110825 202110993 -974539 - MIR SINE MIR -62 200 10 2083 60 0 19 chr5 202111035 202111304 -974228 - AluY SINE Alu -8 303 40 454 274 24 0 chr5 202111326 202111450 -974082 + MER68 LTR ERV1 436 562 0 889 159 0 0 chr5 202111484 202111616 -973916 + FLAM_C SINE Alu 2 133 0 1961 119 6 42 chr5 202111629 202111941 -973591 + AluSg SINE Alu 1 301 -9 1973 113 52 0 chr5 202111941 202112232 -973300 + AluSq SINE Alu 1 306 -7 201 175 0 0 chr5 202112261 202112301 -973231 + A-rich Low_complexity Low_complexity 1 40 0 414 308 41 6 chr5 202113027 202113196 -972336 - MER90 LTR ERV1 -144 470 296 2316 106 0 0 chr5 202113202 202113514 -972018 + AluSx SINE Alu 1 312 0 1916 98 3 48 chr5 202113514 202113833 -971699 + AluSg SINE Alu 1 306 0 370 294 27 30 chr5 202114153 202114409 -971123 + MLT1H1 LTR MaLR 20 274 -281 234 207 17 35 chr5 202114575 202114633 -970899 + MLT1H1 LTR MaLR 443 499 -91 1874 116 4 0 chr5 202114780 202115078 -970454 - AluSx SINE Alu 0 323 25 2047 95 4 4 chr5 202166279 202166543 -918989 - AluSc SINE Alu -45 264 1 641 227 153 23 chr5 202166634 202166810 -918722 - MIR SINE MIR -59 203 5 337 211 10 87 chr5 202167849 202167953 -917579 + MIR SINE MIR 167 262 0 222 276 7 0 chr5 202168633 202168706 -916826 + MIR SINE MIR 72 147 -61 1516 221 24 6 chr5 202169216 202169551 -915981 + MER58B DNA MER1_type 1 341 0 430 262 49 0 chr5 202169709 202169831 -915701 + MLT1F1 LTR MaLR 437 564 -3 420 195 16 70 chr5 202169884 202170012 -915520 + MLT1A1 LTR MaLR 1 121 -307 574 245 61 33 chr5 202170098 202170310 -915222 + MLT1A1 LTR MaLR 148 365 0 3014 207 13 16 chr5 202170310 202171016 -914516 + MLT1A1-int LTR MaLR 1 704 -1031 314 366 18 0 chr5 202175702 202175814 -909718 - L1ME LINE L1 -452 5669 5556 1784 149 3 38 chr5 202175883 202176198 -909334 - AluSx SINE Alu -8 304 1 355 195 13 13 chr5 202176247 202176324 -909208 - AluJ/FRAM SINE Alu -3 299 223 443 181 112 17 chr5 202176541 202176657 -908875 + AluJb SINE Alu 170 296 -16 391 257 165 71 chr5 202176802 202177203 -908329 + L1MC5 LINE L1 7364 7727 -262 2095 95 11 7 chr5 202177336 202177621 -907911 + AluSc SINE Alu 11 296 -13 802 144 100 0 chr5 202177631 202177791 -907741 + AluJb SINE Alu 29 204 -108 1428 71 28 0 chr5 202177891 202178103 -907429 - HERVH LTR ERV1 -386 7327 7110 1006 145 0 6 chr5 202178101 202178260 -907272 - HERVH LTR ERV1 -4064 3649 3492 * 886 134 13 0 chr5 202178250 202178399 -907133 - HERVH LTR ERV1 -4423 3290 3140 * 18600 109 12 25 chr5 202178369 202181412 -904120 - HERVH LTR ERV1 -4709 3004 2 352 43 21 0 chr5 202181414 202181461 -904071 - LTR7 LTR ERV1 -2 448 401 581 236 89 26 chr5 202181628 202181819 -903713 - MLT1E LTR MaLR -178 415 213 2367 56 0 31 chr5 202181927 202182248 -903284 - AluY SINE Alu 0 311 1 1964 208 50 22 chr5 202182248 202182650 -902882 - L1MB3 LINE L1 -353 5830 5410 2340 166 28 19 chr5 202182650 202182843 -902689 + MSTB LTR MaLR 1 191 -235 2036 122 0 59 chr5 202182843 202183164 -902368 + AluSq SINE Alu 3 304 -9 2340 166 28 19 chr5 202183164 202183392 -902140 + MSTB LTR MaLR 191 426 0 1964 208 50 22 chr5 202183392 202183489 -902043 - L1MB3 LINE L1 -773 5410 5317 1964 55 0 4 chr5 202183494 202183729 -901803 - AluSq SINE Alu -45 268 35 668 251 45 18 chr5 202184056 202184279 -901253 + MLT1K LTR MaLR 2 230 -358 297 269 111 46 chr5 202184333 202184635 -900897 + MLT1J2 LTR MaLR 112 450 0 324 232 116 27 chr5 202184643 202184755 -900777 + MLT1K LTR MaLR 226 347 -241 289 279 162 9 chr5 202184851 202184962 -900570 + MLT1K LTR MaLR 357 484 -104 1721 132 84 60 chr5 202185397 202185814 -899718 - LTR7 LTR ERV1 -23 427 1 589 68 0 0 chr5 202185814 202185887 -899645 - AluS SINE Alu -238 74 2 888 228 39 39 chr5 202185899 202186259 -899273 + L1MDa LINE L1 1798 2157 -4383 2026 105 22 44 chr5 202186264 202186579 -898953 + AluSx SINE Alu 3 310 -2 736 89 0 81 chr5 202186580 202186610 -898922 - L1P3 LINE L1 -454 5718 5687 1366 162 113 59 chr5 202186610 202187035 -898497 - LTR7 LTR ERV1 -2 448 1 736 89 0 81 chr5 202187035 202187128 -898404 - L1P3 LINE L1 -485 5687 5605 32 0 0 0 chr5 202187149 202187181 -898351 + AT_rich Low_complexity Low_complexity 1 32 0 342 316 113 42 chr5 202187182 202187394 -898138 + L1MDa LINE L1 2175 2401 -4320 919 103 0 14 chr5 202187422 202187642 -897890 + AluSc SINE Alu 2 309 0 2371 96 3 6 chr5 202187679 202187993 -897539 + AluSp SINE Alu 1 313 0 2567 259 61 14 chr5 202188017 202188520 -897012 - L1MEc LINE L1 -1357 4858 4293 183 42 0 0 chr5 202188520 202188544 -896988 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 2567 259 61 14 chr5 202188544 202188927 -896605 - L1MEc LINE L1 -1922 4293 3930 1174 220 80 53 chr5 202188927 202189333 -896199 - MLT1C LTR MaLR 0 467 73 1972 171 3 0 chr5 202189333 202189637 -895895 - AluJo SINE Alu -7 305 1 2255 109 7 7 chr5 202189646 202189950 -895582 - AluSp SINE Alu -9 304 1 1174 220 80 53 chr5 202189950 202189983 -895549 - MLT1C LTR MaLR -401 66 6 337 264 72 24 chr5 202190003 202190170 -895362 - L1MEc LINE L1 -2299 3916 3742 1031 151 0 0 chr5 202190182 202190341 -895191 - AluYa5 SINE Alu -17 294 136 1192 250 16 0 chr5 202190343 202190647 -894885 - L1MEc LINE L1 -2467 3748 3440 2347 110 7 0 chr5 202190671 202190981 -894551 - AluSx SINE Alu 0 312 1 314 78 98 0 chr5 202190981 202191083 -894449 + (TA)n Simple_repeat Simple_repeat 1 112 0 2239 57 0 4 chr5 202191083 202191364 -894168 - AluY SINE Alu -26 285 6 240 250 244 0 chr5 202191382 202191558 -893974 - L1MEc LINE L1 -2789 3426 3208 2262 63 23 3 chr5 202191560 202191859 -893673 - AluY SINE Alu -5 306 2 464 68 77 8 chr5 202191859 202191976 -893556 + (TA)n Simple_repeat Simple_repeat 2 126 0 2341 46 0 0 chr5 202191976 202192261 -893271 - AluY SINE Alu -26 285 1 892 234 32 29 chr5 202192263 202192575 -892957 - L1MEc LINE L1 -3010 3205 2893 1687 167 17 0 chr5 202192580 202192868 -892664 - AluJb SINE Alu -19 293 1 1553 166 4 4 chr5 202192880 202193145 -892387 - AluJo SINE Alu -47 265 1 3334 242 102 31 chr5 202193163 202194569 -890963 - L1MEc LINE L1 -4838 1377 36 1330 238 81 38 chr5 202194563 202194955 -890577 + L1ME1 LINE L1 4714 5129 -1017 * 2046 107 14 3 chr5 202194955 202195246 -890286 + AluSx SINE Alu 1 294 -18 1330 238 81 38 chr5 202195246 202195298 -890234 + L1ME1 LINE L1 5129 5177 -969 * 1484 214 76 56 chr5 202195292 202195560 -889972 + L1ME1 LINE L1 5417 5699 -467 2188 53 27 0 chr5 202195560 202195860 -889672 - AluY SINE Alu -3 308 1 1484 214 76 56 chr5 202195860 202196036 -889496 + L1ME1 LINE L1 5699 5870 -296 807 104 37 0 chr5 202196118 202196253 -889279 - AluSg/x SINE Alu -8 304 165 394 309 68 12 chr5 202196694 202196856 -888676 + MIR SINE MIR 21 191 -71 270 363 9 0 chr5 202197531 202197644 -887888 - L1ME LINE L1 -452 5669 5556 1889 143 3 16 chr5 202197713 202198021 -887511 - AluSx SINE Alu -8 304 1 870 157 0 0 chr5 202198065 202198205 -887327 - FRAM SINE Alu -14 162 23 311 314 94 43 chr5 202198382 202198777 -886755 - L1MC5 LINE L1 -255 7706 7292 2020 128 7 3 chr5 202199119 202199424 -886108 - AluSx SINE Alu -6 306 1 188 250 73 52 chr5 202199552 202199688 -885844 - MIR3 SINE MIR -61 147 9 1665 178 86 9 chr5 202200104 202200442 -885090 - MLT1A1 LTR MaLR -1 364 1 2307 84 0 3 chr5 202200662 202200960 -884572 - AluSx SINE Alu -15 297 1 2536 58 0 0 chr5 202200971 202201281 -884251 - AluY SINE Alu -1 310 1 901 138 0 0 chr5 202201709 202201839 -883693 - FLAM_C SINE Alu -3 130 1 661 199 127 87 chr5 202202759 202203091 -882441 + LTR16C LTR ERVL 147 491 0 276 215 46 31 chr5 202203091 202203156 -882376 + MIR SINE MIR 85 150 -112 1765 94 63 57 chr5 202203935 202204234 -881298 + AluSx SINE Alu 1 301 -11 947 117 7 7 chr5 202204781 202204919 -880613 + AluSg SINE Alu 1 141 -169 2009 130 0 3 chr5 202204919 202205220 -880312 + AluY SINE Alu 7 306 -5 180 304 0 0 chr5 202205252 202205298 -880234 - MIR SINE MIR -168 94 49 2795 169 54 78 chr5 202206013 202207203 -878329 - pTR5 LTR ERV1 -157 1523 5 224 323 101 20 chr5 202207541 202207640 -877892 + L2 LINE L2 3159 3265 -7 660 255 172 37 chr5 202207695 202207719 -877813 - L1ME1 LINE L1 -99 6067 6048 1800 125 68 0 chr5 202207719 202208000 -877532 + AluSc SINE Alu 1 300 -9 660 255 172 37 chr5 202208000 202208061 -877471 - L1ME1 LINE L1 -118 6048 5997 2088 118 0 3 chr5 202208061 202208366 -877166 + AluSx SINE Alu 1 304 -8 660 255 172 37 chr5 202208366 202208628 -876904 - L1ME1 LINE L1 -169 5997 5672 2108 57 21 0 chr5 202208628 202208911 -876621 + AluY SINE Alu 1 289 -22 228 188 109 16 chr5 202209135 202209199 -876333 + MLT1K LTR MaLR 278 347 -241 318 252 162 9 chr5 202209294 202209405 -876127 + MLT1K LTR MaLR 357 484 -104 195 186 0 0 chr5 202209966 202210009 -875523 + CT-rich Low_complexity Low_complexity 2 44 0 1763 149 0 7 chr5 202210145 202210426 -875106 - AluJo SINE Alu -33 279 1 996 277 90 27 chr5 202210426 202210791 -874741 + MLT1I LTR MaLR 22 409 0 1339 204 138 79 chr5 202211058 202211216 -874316 - MLT1D LTR MaLR 0 505 358 1949 128 42 0 chr5 202211216 202211505 -874027 - AluSg SINE Alu -9 301 1 1339 204 138 79 chr5 202211505 202211728 -873804 - MLT1D LTR MaLR -147 358 88 2123 122 0 0 chr5 202211728 202212039 -873493 - AluSq SINE Alu -2 311 1 1339 204 138 79 chr5 202212039 202212126 -873406 - MLT1D LTR MaLR -417 88 8 749 87 0 0 chr5 202212527 202212631 -872901 - L1PBa LINE L1 -5087 1776 1673 340 78 0 0 chr5 202212631 202212682 -872850 - Alu SINE Alu 0 301 251 1174 33 0 40 chr5 202212682 202212834 -872698 - AluY SINE Alu -165 146 1 1124 126 0 0 chr5 202212834 202212993 -872539 - L1PBa LINE L1 -5176 1687 1529 * 3715 149 70 41 chr5 202212971 202213104 -872428 + L1MCa LINE L1 824 952 -5474 2068 109 0 16 chr5 202213104 202213408 -872124 + AluSx SINE Alu 1 299 -13 3715 149 70 41 chr5 202213408 202213675 -871857 + L1MCa LINE L1 952 1210 -5216 2273 76 0 20 chr5 202213675 202213979 -871553 + AluSc SINE Alu 1 298 -11 3715 149 70 41 chr5 202213979 202214877 -870655 + L1MCa LINE L1 1210 2081 -4345 1892 129 0 0 chr5 202214877 202215157 -870375 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr5 202215160 202215183 -870349 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3715 149 70 41 chr5 202215183 202215535 -869997 + L1MCa LINE L1 2082 2607 -3819 4061 134 21 104 chr5 202215636 202216066 -869466 + L1MA9 LINE L1 5507 5829 -483 2200 89 3 0 chr5 202216066 202216358 -869174 + AluSc SINE Alu 1 293 -16 4061 134 21 104 chr5 202216358 202216801 -868731 + L1MA9 LINE L1 5829 6307 -5 7579 217 86 74 chr5 202216808 202217233 -868299 + L1MCa LINE L1 2598 3017 -3409 2236 76 3 7 chr5 202217233 202217534 -867998 - AluSc SINE Alu -9 300 1 7579 217 86 74 chr5 202217534 202217902 -867630 + L1MCa LINE L1 3017 3379 -3047 1611 189 30 0 chr5 202217902 202218204 -867328 + AluJb SINE Alu 2 312 0 7579 217 86 74 chr5 202218204 202218347 -867185 + L1MCa LINE L1 3379 3519 -2907 1676 133 0 4 chr5 202218347 202218602 -866930 + AluSx SINE Alu 1 254 -58 7579 217 86 74 chr5 202218602 202218797 -866735 + L1MCa LINE L1 3519 3710 -2716 697 154 0 0 chr5 202218797 202218907 -866625 + AluSg/x SINE Alu 197 306 -4 7579 217 86 74 chr5 202218907 202219388 -866144 + L1MCa LINE L1 3710 4184 -2242 1871 146 3 0 chr5 202219388 202219682 -865850 + AluSx SINE Alu 1 295 -17 7579 217 86 74 chr5 202219682 202220164 -865368 + L1MCa LINE L1 4184 4659 -1767 1961 172 22 27 chr5 202220164 202220531 -865001 - MLT1A1 LTR MaLR 0 365 1 7579 217 86 74 chr5 202220531 202220903 -864629 + L1MCa LINE L1 4659 5025 -1401 2854 101 0 3 chr5 202220903 202221279 -864253 - THE1C LTR MaLR 0 375 1 7579 217 86 74 chr5 202221279 202221293 -864239 + L1MCa LINE L1 5025 5037 -1389 189 0 0 0 chr5 202221293 202221314 -864218 + (CGGGG)n Simple_repeat Simple_repeat 2 22 0 7579 217 86 74 chr5 202221314 202221530 -864002 + L1MCa LINE L1 5037 5443 -983 2448 51 0 6 chr5 202221534 202221846 -863686 + AluY SINE Alu 1 310 -1 574 117 23 94 chr5 202221850 202221978 -863554 + L1MC1 LINE L1 6210 6328 -5 2125 107 3 13 chr5 202221980 202222290 -863242 + AluSx SINE Alu 1 307 -5 2295 84 0 7 chr5 202222797 202223105 -862427 + AluSx SINE Alu 1 306 -6 1559 221 120 53 chr5 202223365 202223789 -861743 + L1MDb LINE L1 782 1176 -5230 1708 168 4 0 chr5 202223789 202224069 -861463 + AluJo SINE Alu 1 281 -31 1559 221 120 53 chr5 202224069 202224505 -861027 + L1MDb LINE L1 1176 1670 -4736 1405 142 0 16 chr5 202224506 202224753 -860779 - AluSq SINE Alu -3 310 68 1961 127 58 97 chr5 202224753 202225219 -860313 - LTR7 LTR ERV1 -2 448 1 4786 59 3 8 chr5 202225219 202225830 -859702 - HERVH LTR ERV1 0 7713 7106 1048 143 6 6 chr5 202225822 202225983 -859549 - HERVH LTR ERV1 -4061 3652 3492 * 804 144 34 0 chr5 202225973 202226119 -859413 - HERVH LTR ERV1 -4423 3290 3140 * 583 171 19 9 chr5 202226287 202226392 -859140 - FRAM SINE Alu -76 100 1 2029 102 0 14 chr5 202226407 202226701 -858831 - AluSx SINE Alu -22 290 1 1028 249 46 10 chr5 202226701 202227006 -858526 - L1M4 LINE L1 -959 5187 4872 642 129 30 10 chr5 202227043 202227144 -858388 + U6 snRNA snRNA 4 106 -1 890 143 48 32 chr5 202227169 202227358 -858174 - L1M4c LINE L1 -4736 1648 1457 1751 185 63 25 chr5 202227374 202227736 -857796 + L1 LINE L1 7 382 -6648 986 186 16 0 chr5 202227754 202227947 -857585 + L1 LINE L1 5927 6122 -984 705 132 9 0 chr5 202227947 202228053 -857479 - AluJ SINE Alu -11 301 195 15500 83 7 3 chr5 202228225 202231118 -854414 - L1PA7 LINE L1 -1 6153 3245 980 204 0 51 chr5 202231119 202231335 -854197 - AluJ SINE Alu -107 205 1 969 158 30 20 chr5 202231336 202231538 -853994 + L1 LINE L1 6116 6319 -787 324 207 0 0 chr5 202231545 202231627 -853905 - L1M4 LINE L1 -874 5272 5191 2306 77 7 0 chr5 202231634 202231932 -853600 - AluSx SINE Alu -12 300 1 504 197 94 0 chr5 202231932 202232059 -853473 + L1MA8 LINE L1 6099 6237 -54 412 212 29 36 chr5 202232068 202232288 -853244 + L1M4 LINE L1 4246 4466 -1680 653 58 0 0 chr5 202232288 202232374 -853158 + L1PA5 LINE L1 6069 6154 0 412 212 29 36 chr5 202232374 202232419 -853113 + L1M4 LINE L1 4466 4697 -1449 673 276 42 0 chr5 202232453 202232692 -852840 + L1M4 LINE L1 4653 4901 -1245 * 1336 268 84 46 chr5 202232689 202233533 -851999 - L1MEc LINE L1 -4646 1750 861 2145 127 0 0 chr5 202233533 202233841 -851691 - AluSg SINE Alu -2 308 1 1336 268 84 46 chr5 202233841 202233980 -851552 - L1MEc LINE L1 -5535 861 729 518 223 55 113 chr5 202234529 202234753 -850779 + HAL1 LINE L1 825 1032 -1475 1952 134 7 0 chr5 202234753 202235067 -850465 + AluSg SINE Alu 1 310 0 518 223 55 113 chr5 202235067 202235116 -850416 + HAL1 LINE L1 1032 1082 -1425 2149 73 3 7 chr5 202235116 202235445 -850087 + AluSq SINE Alu 1 328 0 581 135 10 31 chr5 202235445 202235541 -849991 + AluSc SINE Alu 123 216 -93 227 200 0 0 chr5 202235541 202235581 -849951 + LTR30 LTR ERV1 13 52 -670 996 132 42 152 chr5 202235581 202235936 -849596 + LTR12 LTR ERV1 53 285 -429 265 178 27 41 chr5 202235937 202236010 -849522 + LTR30 LTR ERV1 553 624 -98 704 132 5 0 chr5 202236010 202236126 -849406 + LTR12 LTR ERV1 52 714 0 583 132 0 22 chr5 202236126 202236217 -849315 + AluSg/x SINE Alu 206 294 -18 2488 273 55 38 chr5 202236239 202237063 -848469 + HAL1 LINE L1 1158 2010 -497 2092 111 0 3 chr5 202237063 202237360 -848172 + AluSx SINE Alu 1 296 -16 2488 273 55 38 chr5 202237360 202237723 -847809 + HAL1 LINE L1 2010 2365 -142 2402 61 0 0 chr5 202237853 202238163 -847369 - AluY SINE Alu 0 311 2 1595 177 0 23 chr5 202238164 202238363 -847169 - AluJo SINE Alu -14 298 107 4017 108 23 46 chr5 202238363 202239012 -846520 + MER51A LTR ERV1 1 634 0 1595 177 0 23 chr5 202239012 202239117 -846415 - AluJo SINE Alu -205 107 1 186 338 119 0 chr5 202239289 202239440 -846092 - L2 LINE L2 -154 3118 2950 861 191 6 30 chr5 202239461 202239629 -845903 - FRAM SINE Alu -9 167 4 252 0 0 0 chr5 202239639 202239667 -845865 + (TG)n Simple_repeat Simple_repeat 2 29 0 2174 120 0 0 chr5 202239771 202240079 -845453 + AluSx SINE Alu 1 308 -4 716 249 144 54 chr5 202240084 202240513 -845019 - MER74B LTR ERVL -88 534 67 1930 176 92 24 chr5 202240973 202241438 -844094 + LOR1a LTR ERV1 1 497 0 508 111 0 0 chr5 202241438 202241510 -844022 + AluJ/FLAM SINE Alu 12 83 -229 2681 171 16 29 chr5 202241523 202242144 -843388 + pTR5 LTR ERV1 741 1353 -1085 761 145 23 0 chr5 202242150 202242307 -843225 + pTR5 LTR ERV1 273 581 -133 301 164 0 0 chr5 202242314 202242369 -843163 + Alu SINE Alu 242 296 -6 847 217 99 81 chr5 202242379 202242501 -843031 - MER93b LTR ERV1 -44 329 211 2471 81 0 3 chr5 202242501 202242810 -842722 + AluY SINE Alu 1 308 -3 847 217 99 81 chr5 202242810 202243009 -842523 - MER93b LTR ERV1 -162 211 2 460 212 50 0 chr5 202243053 202243152 -842380 + L2 LINE L2 3185 3288 -25 1650 219 33 76 chr5 202244409 202244519 -841013 + MLT1D LTR MaLR 1 114 -391 2175 105 0 17 chr5 202244519 202244815 -840717 - AluSc SINE Alu -18 291 1 2264 101 0 3 chr5 202244815 202245101 -840431 - AluSq SINE Alu -28 285 1 2400 50 0 18 chr5 202245105 202245388 -840144 - AluY SINE Alu -13 298 21 1650 219 33 76 chr5 202245388 202245399 -840133 + MLT1D LTR MaLR 116 126 -379 1963 137 18 3 chr5 202245399 202245684 -839848 - AluSx SINE Alu -22 290 2 1650 219 33 76 chr5 202245684 202246071 -839461 + MLT1D LTR MaLR 126 494 -11 268 303 163 22 chr5 202247227 202247504 -838028 - MLT1K LTR MaLR -244 344 29 247 235 0 0 chr5 202247551 202247602 -837930 + LTR30 LTR ERV1 2 52 -670 3049 141 54 33 chr5 202247602 202248196 -837336 + LTR12 LTR ERV1 55 2313 -125 214 214 129 14 chr5 202248436 202248506 -837026 + MIR SINE MIR 67 144 -64 1969 154 3 3 chr5 202249261 202249553 -835979 + AluSx SINE Alu 1 292 -20 1476 238 55 13 chr5 202250413 202250792 -834740 + MSTD LTR MaLR 1 395 -1 311 313 92 0 chr5 202251586 202251749 -833783 - L2 LINE L2 -600 2714 2537 253 221 269 29 chr5 202252440 202252544 -832988 - MER5A DNA MER1_type 0 189 61 510 190 25 18 chr5 202252547 202252710 -832822 + CT-rich Low_complexity Low_complexity 4 167 0 671 182 0 0 chr5 202252712 202252822 -832710 - FLAM_A SINE Alu -13 129 20 775 151 0 8 chr5 202253355 202253481 -832051 + AluJ SINE Alu 1 125 -177 235 289 113 31 chr5 202253481 202253578 -831954 - MER5A DNA MER1_type 0 189 85 293 370 59 0 chr5 202253769 202253904 -831628 - MIR SINE MIR -70 192 50 344 148 0 148 chr5 202254208 202254323 -831209 + HAL1 LINE L1 99 196 -2311 497 178 25 76 chr5 202255086 202255243 -830289 + MIR SINE MIR 73 221 -41 561 173 211 0 chr5 202255243 202255376 -830156 + MER20 DNA MER1_type 1 161 -58 200 255 0 0 chr5 202255405 202255452 -830080 + L2 LINE L2 3255 3301 -12 288 290 48 14 chr5 202255528 202255673 -829859 + L1M4 LINE L1 2684 2833 -3313 22 35 0 0 chr5 202255969 202255998 -829534 + AT_rich Low_complexity Low_complexity 1 29 0 2000 116 60 0 chr5 202256012 202256296 -829236 + AluSx SINE Alu 1 301 -11 1107 138 58 6 chr5 202256299 202256473 -829059 + AluJ SINE Alu 129 311 -1 865 160 0 0 chr5 202256568 202256699 -828833 + FLAM_C SINE Alu 1 131 -12 227 257 40 47 chr5 202256728 202256876 -828656 + L1M4 LINE L1 3209 3355 -2791 361 260 51 36 chr5 202256903 202257099 -828433 + HAL1 LINE L1 47 245 -2262 650 244 116 9 chr5 202257374 202257599 -827933 + L1MDb LINE L1 805 1053 -5490 1923 153 0 3 chr5 202257606 202257938 -827594 + AluJb SINE Alu 7 312 0 2153 111 7 7 chr5 202257940 202258238 -827294 + AluSg SINE Alu 1 298 -12 394 145 0 34 chr5 202258239 202258327 -827205 + L1MDb LINE L1 1563 1654 -4876 333 42 0 0 chr5 202258361 202258409 -827123 - L1MDa LINE L1 -4829 1711 1664 305 156 5 9 chr5 202258418 202258463 -827069 - Alu SINE Alu -258 44 15 2206 114 0 7 chr5 202258463 202258770 -826762 - AluSg SINE Alu -5 305 1 305 156 5 9 chr5 202258770 202258784 -826748 - Alu SINE Alu -287 15 2 354 229 0 12 chr5 202258792 202258875 -826657 - L1ME2 LINE L1 -288 5876 5795 2327 217 2 2 chr5 202258875 202259364 -826168 - L1MD2 LINE L1 -488 5871 5383 1685 58 40 54 chr5 202259393 202259616 -825916 - AluSc SINE Alu -89 220 1 2384 233 36 49 chr5 202259616 202259743 -825789 - L1MD2 LINE L1 -744 5402 5275 1985 135 3 0 chr5 202259743 202260031 -825501 - AluSx SINE Alu -1 311 23 2384 233 36 49 chr5 202260031 202260318 -825214 - L1MD2 LINE L1 -871 5275 4986 2396 79 7 0 chr5 202260318 202260608 -824924 + AluY SINE Alu 1 292 -19 2384 233 36 49 chr5 202260608 202260754 -824778 - L1MD2 LINE L1 -1160 4986 4840 1865 142 7 36 chr5 202260754 202261057 -824475 + AluJb SINE Alu 1 294 -18 2384 233 36 49 chr5 202261057 202261375 -824157 - L1MD2 LINE L1 -1306 4840 4533 648 167 8 23 chr5 202261403 202261535 -823997 - FLAM_A SINE Alu 0 133 4 1509 166 0 4 chr5 202261542 202261615 -823917 + AluJo SINE Alu 61 133 -179 2230 119 0 6 chr5 202261615 202261927 -823605 + AluSg SINE Alu 1 310 0 1509 166 0 4 chr5 202261927 202262088 -823444 + AluJo SINE Alu 133 294 -18 24 32 0 0 chr5 202262104 202262135 -823397 + AT_rich Low_complexity Low_complexity 1 31 0 1899 147 10 20 chr5 202262226 202262526 -823006 - AluJo SINE Alu -15 297 1 1503 53 0 37 chr5 202262538 202262725 -822807 - AluY SINE Alu -14 297 118 1123 62 0 0 chr5 202262754 202262883 -822649 - AluY SINE Alu -182 129 1 643 228 30 42 chr5 202262891 202263058 -822474 + L1MD2 LINE L1 6073 6237 -122 885 143 0 0 chr5 202263058 202263191 -822341 + AluJo/FLAM SINE Alu 1 133 -169 2395 81 7 0 chr5 202263194 202263491 -822041 + AluSp SINE Alu 1 299 -14 2292 114 0 3 chr5 202264237 202264543 -820989 - AluY SINE Alu -6 305 1 1219 76 0 0 chr5 202264543 202264688 -820844 - AluSq/x SINE Alu -167 145 1 909 241 53 110 chr5 202264756 202265018 -820514 - Charlie4a DNA MER1_type -1453 508 233 2084 95 32 0 chr5 202265018 202265301 -820231 - AluSx SINE Alu -20 292 1 909 241 53 110 chr5 202265301 202265326 -820206 - Charlie4a DNA MER1_type -1728 233 208 730 171 0 0 chr5 202265326 202265455 -820077 + L1MB5 LINE L1 6037 6165 -9 909 241 53 110 chr5 202265455 202265601 -819931 - Charlie4a DNA MER1_type -1753 208 99 403 264 79 28 chr5 202265686 202265864 -819668 + MLT1J2 LTR MaLR 256 442 -8 229 293 24 0 chr5 202265861 202265943 -819589 + MLT1K LTR MaLR 505 588 0 * 2295 122 0 3 chr5 202266358 202266669 -818863 + AluSx SINE Alu 1 310 -2 2438 72 10 0 chr5 202266678 202266971 -818561 + AluY SINE Alu 1 296 -15 2012 108 32 0 chr5 202267681 202267960 -817572 - AluSx SINE Alu -1 311 24 249 208 19 0 chr5 202267961 202268014 -817518 + FAM SINE Alu 120 173 -6 2225 120 3 3 chr5 202269099 202269398 -816134 - AluSq SINE Alu -14 299 1 2415 78 0 7 chr5 202269724 202270020 -815512 - AluY SINE Alu -17 294 1 246 214 0 60 chr5 202270025 202270109 -815423 + MLT1K LTR MaLR 486 564 -24 1777 141 48 26 chr5 202270628 202270941 -814591 - MSTC LTR MaLR 0 428 109 415 154 10 44 chr5 202271128 202271218 -814314 + L1ME LINE L1 5512 5595 -526 565 156 0 0 chr5 202271218 202271314 -814218 - AluJo SINE Alu -170 142 47 381 60 0 0 chr5 202271314 202271364 -814168 - MSTC LTR MaLR -317 111 62 746 225 97 41 chr5 202271370 202271463 -814069 - MLT-int LTR MaLR -941 794 708 2357 84 0 19 chr5 202271463 202271773 -813759 - AluSq SINE Alu -2 311 8 746 225 97 41 chr5 202271773 202271946 -813586 - MLT-int LTR MaLR -1027 708 513 247 132 0 0 chr5 202271946 202271984 -813548 - MSTC LTR MaLR -390 38 1 1247 157 0 5 chr5 202272110 202272314 -813218 + LTR26B LTR ERV1 1 203 -328 1744 143 32 4 chr5 202272314 202272593 -812939 + AluJb SINE Alu 1 287 -25 1880 72 72 61 chr5 202272615 202272892 -812640 + AluSg SINE Alu 1 280 -30 279 0 0 0 chr5 202274531 202274562 -810970 + (A)n Simple_repeat Simple_repeat 1 31 0 847 197 0 0 chr5 202274563 202274715 -810817 + FRAM SINE Alu 1 152 -14 22 0 0 0 chr5 202275110 202275132 -810400 + AT_rich Low_complexity Low_complexity 1 22 0 286 116 0 0 chr5 202275160 202275203 -810329 + Alu SINE Alu 1 43 -256 1229 190 58 0 chr5 202275234 202275476 -810056 + LTR47A LTR ERVL 197 452 0 1363 104 0 11 chr5 202276227 202276410 -809122 - AluSg SINE Alu -129 181 1 1916 81 4 8 chr5 202276432 202276679 -808853 - AluSg SINE Alu -64 246 1 278 126 0 59 chr5 202276712 202276784 -808748 - Alu SINE Alu -6 296 247 575 60 52 17 chr5 202276784 202276900 -808632 - L1P LINE L1 -776 5389 5270 792 162 36 18 chr5 202276906 202277073 -808459 - L1MB3 LINE L1 -7 6176 6007 612 277 0 0 chr5 202277114 202277462 -808070 + GA-rich Low_complexity Low_complexity 1 348 0 1575 137 101 7 chr5 202278050 202278327 -807205 + AluJb SINE Alu 1 303 -9 1278 229 22 14 chr5 202278327 202278689 -806843 + L1MB8 LINE L1 4321 4685 -1461 804 150 0 0 chr5 202278707 202278834 -806698 - FLAM_C SINE Alu -6 127 1 3684 250 53 2 chr5 202278834 202278925 -806607 - L1 LINE L1 -2310 3836 3751 2225 115 6 10 chr5 202278925 202279237 -806295 - AluSx SINE Alu -1 311 1 3684 250 53 2 chr5 202279237 202280294 -805238 - L1 LINE L1 -2395 3751 2629 198 0 0 0 chr5 202280423 202280445 -805087 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 592 248 144 70 chr5 202280459 202280562 -804970 + MLT1H LTR MaLR 1 95 -454 2362 89 7 3 chr5 202280562 202280865 -804667 + AluY SINE Alu 1 304 -7 592 248 144 70 chr5 202280865 202281031 -804501 + MLT1H LTR MaLR 95 290 -259 230 242 16 0 chr5 202282232 202282294 -803238 + GA-rich Low_complexity Low_complexity 2 64 0 1170 122 4 0 chr5 202282680 202282969 -802563 + (TG)n Simple_repeat Simple_repeat 1 290 0 23 0 0 0 chr5 202283453 202283476 -802056 + AT_rich Low_complexity Low_complexity 1 23 0 4320 159 15 47 chr5 202283684 202284128 -801404 - L1M4c LINE L1 -5552 832 426 2532 56 0 0 chr5 202284128 202284433 -801099 + AluY SINE Alu 1 305 -6 4320 159 15 47 chr5 202284433 202284845 -800687 - L1M4c LINE L1 -5958 426 3 3024 193 56 42 chr5 202284832 202285841 -799691 + L1MB8 LINE L1 4845 5882 -296 * 2172 110 3 13 chr5 202285841 202286149 -799383 + AluSx SINE Alu 1 305 -7 3024 193 56 42 chr5 202286149 202286308 -799224 + L1MB8 LINE L1 5882 6037 -141 1008 79 0 0 chr5 202286459 202286586 -798946 + AluY SINE Alu 173 299 -12 389 255 87 49 chr5 202286700 202286721 -798811 - L1M4 LINE L1 -1353 4793 4774 1752 210 80 30 chr5 202286721 202287160 -798372 - LOR1b LTR ERV1 0 461 1 389 255 87 49 chr5 202287160 202287424 -798108 - L1M4 LINE L1 -1372 4774 4497 1527 73 19 0 chr5 202287432 202287638 -797894 + MLT2A2 LTR ERVL 1 210 -243 2340 74 3 14 chr5 202287650 202287946 -797586 - AluSp SINE Alu -20 293 1 4181 214 66 26 chr5 202287949 202288488 -797044 - L1 LINE L1 -2882 3500 2984 1558 73 0 46 chr5 202288488 202288706 -796826 + AluY SINE Alu 98 305 -6 4181 214 66 26 chr5 202288706 202288719 -796813 - L1 LINE L1 -3398 2984 2973 2049 86 100 4 chr5 202288719 202288988 -796544 + AluSg SINE Alu 1 295 -15 4181 214 66 26 chr5 202288988 202289778 -795754 - L1 LINE L1 -3409 2973 2091 256 270 39 12 chr5 202293144 202293240 -792292 + MIR SINE MIR 49 149 -59 806 211 110 20 chr5 202295180 202295426 -790106 - L1MC2 LINE L1 -37 6307 6040 1074 269 29 13 chr5 202295454 202295829 -789703 - L1MC2 LINE L1 -1817 5968 5588 722 270 93 29 chr5 202295811 202296293 -789239 - L1MC2 LINE L1 -2570 3576 3064 * 1901 147 3 3 chr5 202296314 202296626 -788906 - AluSx SINE Alu 0 312 1 837 121 0 0 chr5 202296744 202296868 -788664 + AluSg/x SINE Alu 174 297 -15 350 379 12 38 chr5 202298384 202298624 -786908 + L1M4 LINE L1 3574 3807 -2339 324 180 0 137 chr5 202298706 202298867 -786665 + LOR1-int LTR ERV1 4164 4302 -3818 606 116 51 94 chr5 202298943 202299081 -786451 - AluSp/q SINE Alu -6 307 176 240 324 10 29 chr5 202299829 202299931 -785601 + MIR SINE MIR 41 140 -68 550 160 0 11 chr5 202300117 202300211 -785321 - AluSg/x SINE Alu -1 309 217 1725 96 4 0 chr5 202300418 202300657 -784875 - AluSc SINE Alu -69 240 1 493 205 215 10 chr5 202300664 202300864 -784668 - Charlie5 DNA MER1_type -2123 489 249 355 228 25 0 chr5 202300951 202301030 -784502 - Charlie5 DNA MER1_type -2530 82 2 2351 66 13 0 chr5 202302371 202302674 -782858 - AluY SINE Alu -4 307 1 1881 131 3 0 chr5 202302873 202303155 -782377 - AluJb SINE Alu -18 294 12 440 158 24 24 chr5 202303236 202303318 -782214 + Tigger3(Golem) DNA MER2_type 1 82 -2947 1610 157 39 0 chr5 202303332 202303618 -781914 - AluJb SINE Alu -15 297 1 1379 158 81 15 chr5 202303619 202303651 -781881 + Tigger3(Golem) DNA MER2_type 2730 2758 -270 2341 74 0 0 chr5 202303651 202303948 -781584 - AluY SINE Alu -14 297 1 1379 158 81 15 chr5 202303948 202304175 -781357 + Tigger3(Golem) DNA MER2_type 2758 3006 -22 771 224 4 7 chr5 202305228 202305377 -780155 - L1M2 LINE L1 -535 5639 5491 2342 87 0 0 chr5 202305377 202305688 -779844 - AluY SINE Alu 0 311 1 771 224 4 7 chr5 202305688 202305715 -779817 - L1M2 LINE L1 -683 5491 5465 3755 113 50 23 chr5 202305949 202306514 -779018 + LTR19B LTR ERV1 1 580 0 205 98 24 49 chr5 202306538 202306579 -778953 - MIR SINE MIR -123 139 100 3597 77 2 0 chr5 202307001 202307453 -778079 - LTR13 LTR ERVK -554 453 1 2029 256 124 18 chr5 202307642 202308417 -777115 - L1MB5 LINE L1 -8 6166 5310 181 224 276 0 chr5 202308689 202308765 -776767 + MIR SINE MIR 35 131 -77 584 174 134 13 chr5 202310358 202310507 -775025 + L1MB3 LINE L1 5966 6132 -51 2438 57 0 0 chr5 202310511 202310808 -774724 + AluY SINE Alu 1 297 -14 828 145 7 7 chr5 202310820 202310958 -774574 + AluJo SINE Alu 1 138 -174 2170 116 3 0 chr5 202310959 202311270 -774262 + AluSp SINE Alu 2 313 0 4364 156 102 47 chr5 202311271 202311400 -774132 + L1MC2 LINE L1 5201 5321 -1023 1473 127 0 18 chr5 202311400 202311628 -773904 + AluSq SINE Alu 1 224 -89 4364 156 102 47 chr5 202311628 202312582 -772950 + L1MC2 LINE L1 5321 6342 -2 1743 227 72 10 chr5 202313391 202313902 -771630 - MER67A LTR ERV1 0 543 1 23 33 0 0 chr5 202314108 202314138 -771394 + GC_rich Low_complexity Low_complexity 1 30 0 2373 62 3 0 chr5 202314910 202315216 -770316 + AluY SINE Alu 1 307 -4 743 158 7 41 chr5 202315307 202315480 -770052 - FLAM_C SINE Alu 0 143 3 639 210 24 24 chr5 202316298 202316465 -769067 - L1MB7 LINE L1 -110 6074 5908 1620 164 7 23 chr5 202316465 202316769 -768763 + AluJo SINE Alu 1 299 -13 4037 48 16 0 chr5 202317089 202317584 -767948 - MER11B LTR ERVK -733 503 1 2880 205 28 7 chr5 202317584 202318199 -767333 - L1MB3 LINE L1 -302 5881 5254 2265 172 52 2 chr5 202318204 202318610 -766922 + MSTB LTR MaLR 1 426 0 3249 219 66 31 chr5 202318610 202318990 -766542 + MSTB-int LTR MaLR 1 366 -1285 1988 125 30 0 chr5 202318990 202319293 -766239 - AluSq SINE Alu 0 313 2 3249 219 66 31 chr5 202319293 202319711 -765821 + MSTB-int LTR MaLR 366 827 -824 814 205 6 0 chr5 202319712 202319883 -765649 - L1MB3 LINE L1 -949 5197 5026 4566 118 7 1 chr5 202319893 202320568 -764964 - L1PA13 LINE L1 -14 6149 5471 226 0 0 0 chr5 202320569 202320593 -764939 - AluY SINE Alu -258 44 21 990 165 72 0 chr5 202320600 202320794 -764738 - L1PA13 LINE L1 -2227 3919 3712 608 236 75 0 chr5 202320769 202320930 -764602 - L1MB3 LINE L1 -1126 5020 4848 * 1241 292 68 17 chr5 202321058 202321469 -764063 - MER70B LTR ERVL -143 435 4 4287 241 31 53 chr5 202321480 202322570 -762962 - L1MB3 LINE L1 -1311 4835 3740 1127 111 0 0 chr5 202322570 202322743 -762789 - AluY SINE Alu 0 301 129 4287 241 31 53 chr5 202322743 202323268 -762264 - L1MB3 LINE L1 -2406 3740 3205 1462 211 13 0 chr5 202323259 202323558 -761974 + L1 LINE L1 3829 4131 -2015 * 22 0 0 0 chr5 202323558 202323580 -761952 + AT_rich Low_complexity Low_complexity 1 22 0 187 281 56 22 chr5 202325280 202325369 -760163 - L2 LINE L2 -213 3059 2968 307 315 99 28 chr5 202326173 202326354 -759178 - MIR SINE MIR -56 206 13 3101 134 45 10 chr5 202326529 202327038 -758494 - MER1A DNA MER1_type 0 527 1 238 140 0 100 chr5 202327045 202327072 -758460 - MER75 DNA T2_type -1 503 482 2348 237 32 78 chr5 202327072 202328087 -757445 + LTR5 LTR ERVK 1 969 0 238 140 0 100 chr5 202328087 202328109 -757423 - MER75 DNA T2_type -22 482 459 297 0 0 0 chr5 202328748 202328781 -756751 + (CA)n Simple_repeat Simple_repeat 2 34 0 207 0 0 0 chr5 202330469 202330492 -755040 + (CAA)n Simple_repeat Simple_repeat 2 24 0 450 0 0 0 chr5 202332342 202332392 -753140 + (CA)n Simple_repeat Simple_repeat 2 51 0 1371 208 0 24 chr5 202333089 202333378 -752154 + AluJo SINE Alu 1 282 -30 2041 107 7 0 chr5 202333455 202333735 -751797 + AluSx SINE Alu 1 282 -30 1782 166 10 0 chr5 202334082 202334378 -751154 + AluJb SINE Alu 1 299 -13 286 281 69 44 chr5 202334922 202335125 -750407 - L1ME LINE L1 -287 5834 5627 1871 127 0 0 chr5 202335594 202335869 -749663 - AluSx SINE Alu -37 275 1 582 275 207 30 chr5 202336921 202337288 -748244 - L3 LINE CR1 -7 1570 1139 969 128 20 0 chr5 202337352 202337542 -747990 - AluSg/x SINE Alu 0 323 131 743 190 161 0 chr5 202337674 202337848 -747684 + Tigger1 DNA MER2_type 2217 2418 0 1872 179 29 27 chr5 202337849 202338263 -747269 - L1M4 LINE L1 -1215 4931 4517 361 209 54 39 chr5 202338275 202338404 -747128 - L1M4 LINE L1 -2075 4071 3941 2661 228 107 15 chr5 202338440 202339052 -746480 - L1M4 LINE L1 -2321 3825 3271 2071 115 0 0 chr5 202339052 202339356 -746176 - AluSc SINE Alu -5 304 1 2661 228 107 15 chr5 202339356 202339479 -746053 - L1M4 LINE L1 -2875 3271 3161 1977 102 24 17 chr5 202339479 202339774 -745758 - AluY SINE Alu -14 297 1 2661 228 107 15 chr5 202339774 202340195 -745337 - L1M4 LINE L1 -2985 3161 2461 685 246 41 5 chr5 202340203 202340398 -745134 - L1M4 LINE L1 -3735 2411 2210 424 241 130 27 chr5 202340384 202340645 -744887 - Charlie5 DNA MER1_type -299 2313 2026 * 737 213 0 0 chr5 202340645 202340772 -744760 - FLAM_C SINE Alu -15 128 2 1557 176 69 14 chr5 202340772 202341193 -744339 - Charlie5 DNA MER1_type -575 2037 1594 1943 103 32 7 chr5 202341194 202341476 -744056 - AluSq SINE Alu -16 297 9 301 232 18 0 chr5 202341489 202341545 -743987 + L1MC4 LINE L1 6647 6703 -1339 483 228 176 28 chr5 202341725 202341933 -743599 + L1MEc LINE L1 1725 1979 -4417 1991 150 73 0 chr5 202341933 202342274 -743258 - MER47A DNA MER2_type 0 366 1 483 228 176 28 chr5 202342274 202342320 -743212 + L1MEc LINE L1 1979 2017 -4379 301 221 59 15 chr5 202342320 202342388 -743144 + L1MEc LINE L1 2226 2296 -4100 2254 104 0 0 chr5 202342806 202343114 -742418 + AluSx SINE Alu 2 309 -3 315 263 32 103 chr5 202343115 202343271 -742261 + L1M4 LINE L1 5095 5239 -907 406 252 213 29 chr5 202343281 202343688 -741844 + MLT1H1 LTR MaLR 15 547 -8 638 279 161 53 chr5 202343704 202343848 -741684 + L1PB4 LINE L1 5254 5381 -775 2041 134 3 3 chr5 202343848 202344146 -741386 + AluSx SINE Alu 4 301 -11 638 279 161 53 chr5 202344146 202344815 -740717 + L1PB4 LINE L1 5381 6155 -1 1721 174 26 7 chr5 202344824 202345129 -740403 + AluJb SINE Alu 1 311 -1 1826 124 19 50 chr5 202345139 202345462 -740070 + AluSq SINE Alu 1 313 0 1009 129 67 58 chr5 202346276 202346500 -739032 - AluSg/x SINE Alu -3 307 82 216 0 0 0 chr5 202346829 202346853 -738679 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 205 250 36 0 chr5 202348050 202348106 -737426 - MIR SINE MIR -118 144 87 229 286 0 33 chr5 202349000 202349091 -736441 + MIR SINE MIR 45 132 -76 2046 120 10 0 chr5 202352364 202352655 -732877 + AluSg SINE Alu 1 294 -16 201 337 128 0 chr5 202352889 202352975 -732557 - L2 LINE L2 -569 2745 2649 204 333 152 0 chr5 202353470 202353608 -731924 + MIR SINE MIR 104 262 0 2269 93 3 0 chr5 202354252 202354554 -730978 - AluY SINE Alu -8 303 1 355 267 28 16 chr5 202354599 202354723 -730809 - MIR3 SINE MIR -46 162 36 202 274 82 14 chr5 202356173 202356246 -729286 + MIR SINE MIR 115 192 -70 539 190 11 22 chr5 202356868 202357047 -728485 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 975 161 0 0 chr5 202357073 202357253 -728279 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 792 200 0 0 chr5 202357289 202357469 -728063 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 405 271 29 71 chr5 202357489 202357659 -727873 - L2 LINE L2 -1 3312 3150 193 237 62 62 chr5 202357864 202357961 -727571 - L2 LINE L2 -529 2785 2689 239 342 44 81 chr5 202358054 202358326 -727206 - L2 LINE L2 -827 2487 2226 271 295 240 12 chr5 202358440 202358651 -726881 - L2 LINE L2 -1384 1930 1648 2092 110 13 0 chr5 202358651 202358951 -726581 + AluSx SINE Alu 1 304 -8 271 295 240 12 chr5 202358951 202358997 -726535 - L2 LINE L2 -1666 1648 1614 2060 81 84 0 chr5 202359125 202359410 -726122 - AluSc SINE Alu 0 309 1 467 348 89 9 chr5 202359664 202360127 -725405 - L2 LINE L2 -2375 939 440 472 186 17 0 chr5 202360421 202360539 -724993 + (TCCA)n Simple_repeat Simple_repeat 4 123 0 302 301 62 73 chr5 202360564 202360836 -724696 + L1M3c LINE L1 1191 1459 -4682 * 411 333 66 76 chr5 202360811 202361412 -724120 + L1M4c LINE L1 794 3550 -2832 222 250 22 33 chr5 202361443 202361535 -723997 + GA-rich Low_complexity Low_complexity 6 96 0 887 167 0 78 chr5 202361652 202361712 -723820 - AluJb SINE Alu -131 181 118 2156 73 17 3 chr5 202361712 202362000 -723532 - AluSc SINE Alu -17 292 1 887 167 0 78 chr5 202362000 202362131 -723401 - AluJb SINE Alu -194 118 5 1207 164 0 52 chr5 202365397 202365490 -720042 - AluJo SINE Alu -92 220 124 1913 160 7 3 chr5 202365490 202365797 -719735 - AluJb SINE Alu -4 308 1 1207 164 0 52 chr5 202365797 202365935 -719597 - AluJo SINE Alu -188 124 1 2371 226 41 9 chr5 202365939 202366573 -718959 - L1MB3 LINE L1 -45 6138 5485 577 234 55 93 chr5 202367190 202367481 -718051 - MLT1D LTR MaLR 0 505 188 620 164 0 16 chr5 202367529 202367712 -717820 + (TG)n Simple_repeat Simple_repeat 1 180 0 370 269 0 0 chr5 202367823 202368038 -717494 + (TG)n Simple_repeat Simple_repeat 1 215 0 282 277 0 24 chr5 202368042 202368125 -717407 - MLT1D LTR MaLR -311 194 114 252 333 29 23 chr5 202369850 202369955 -715577 - MLT1K LTR MaLR -88 500 392 2160 96 3 0 chr5 202369955 202370247 -715285 - AluSg SINE Alu -17 293 1 252 333 29 23 chr5 202370247 202370315 -715217 - MLT1K LTR MaLR -196 392 326 1342 183 49 7 chr5 202371645 202371929 -713603 - MLT1A1 LTR MaLR -65 300 5 1025 147 26 0 chr5 202372460 202372616 -712916 + FRAM SINE Alu 1 160 -6 235 222 0 0 chr5 202373765 202373810 -711722 + Alu SINE Alu 78 122 -180 2006 60 99 3 chr5 202373840 202374122 -711410 + AluSq SINE Alu 1 309 -4 1532 160 34 14 chr5 202376128 202376311 -709221 + AluJb SINE Alu 6 199 -113 2528 34 0 10 chr5 202376311 202376609 -708923 + AluY SINE Alu 1 295 -16 1532 160 34 14 chr5 202376609 202376719 -708813 + AluJb SINE Alu 199 305 -7 674 332 103 15 chr5 202376906 202377373 -708159 + L2 LINE L2 2366 2873 -441 387 340 115 48 chr5 202377374 202377658 -707874 - L1MDb LINE L1 -4990 1419 1181 1542 199 7 14 chr5 202377658 202377954 -707578 - AluJb SINE Alu -18 294 1 387 340 115 48 chr5 202377954 202378237 -707295 - L1MDb LINE L1 -5228 1181 918 1969 118 51 0 chr5 202379468 202379586 -705946 + AluSx SINE Alu 1 112 -200 192 111 0 0 chr5 202379586 202379622 -705910 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1969 118 51 0 chr5 202379622 202379799 -705733 + AluSx SINE Alu 112 311 -1 3915 181 45 84 chr5 202379970 202380047 -705485 + LTR13 LTR ERVK 1 79 -875 2266 44 7 17 chr5 202380047 202380344 -705188 + AluY SINE Alu 1 294 -17 3915 181 45 84 chr5 202380344 202381258 -704274 + LTR13 LTR ERVK 79 954 0 2566 43 0 0 chr5 202383469 202383774 -701758 + AluY SINE Alu 2 306 -5 359 153 0 41 chr5 202384226 202384324 -701208 + C-rich Low_complexity Low_complexity 4 97 0 277 306 27 0 chr5 202389854 202389950 -695582 + MIR SINE MIR 49 149 -59 28 29 0 0 chr5 202392107 202392142 -693390 + GC_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr5 202392306 202392345 -693187 + GC_rich Low_complexity Low_complexity 1 39 0 207 69 0 0 chr5 202395128 202395157 -690375 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 2393 77 3 7 chr5 202397377 202397677 -687855 - AluSp SINE Alu -14 299 1 186 296 61 31 chr5 202398479 202398577 -686955 + MIR3 SINE MIR 65 165 -43 2563 67 0 0 chr5 202404342 202404640 -680892 + AluY SINE Alu 1 298 -13 297 0 0 0 chr5 202405749 202405782 -679750 + (TG)n Simple_repeat Simple_repeat 1 33 0 219 352 8 8 chr5 202405820 202405948 -679584 + (TG)n Simple_repeat Simple_repeat 1 128 0 2422 64 27 3 chr5 202407567 202407864 -677668 + AluY SINE Alu 1 304 -7 665 199 6 0 chr5 202407891 202408062 -677470 + (TGGA)n Simple_repeat Simple_repeat 2 173 0 2142 102 22 35 chr5 202409612 202409926 -675606 + AluSx SINE Alu 1 310 -2 2561 72 0 0 chr5 202410947 202411252 -674280 - AluY SINE Alu -6 305 1 5688 216 93 21 chr5 202411379 202412317 -673215 + L1MD1 LINE L1 3 872 -5668 341 22 22 0 chr5 202412317 202412363 -673169 + (CA)n Simple_repeat Simple_repeat 2 48 0 5688 216 93 21 chr5 202412363 202412459 -673073 + L1MD1 LINE L1 872 960 -5580 1741 144 52 11 chr5 202412459 202412730 -672802 + AluJb SINE Alu 1 282 -30 5688 216 93 21 chr5 202412730 202413475 -672057 + L1MD1 LINE L1 960 1650 -4890 2251 95 7 0 chr5 202413475 202413760 -671772 + AluSg SINE Alu 10 296 -14 5688 216 93 21 chr5 202413760 202414770 -670762 + L1MD1 LINE L1 1650 3220 -3320 543 228 0 8 chr5 202414785 202414908 -670624 + FLAM_A SINE Alu 18 139 -3 397 230 62 66 chr5 202414919 202415145 -670387 + L1MD1 LINE L1 3332 3556 -2984 2831 211 84 21 chr5 202415623 202416737 -668795 + L1MD1 LINE L1 5166 6360 -276 2446 76 0 13 chr5 202416737 202417038 -668494 - AluY SINE Alu -12 299 3 2831 211 84 21 chr5 202417038 202417158 -668374 + L1MD1 LINE L1 6360 6471 -165 1974 156 44 21 chr5 202417173 202417558 -667974 - L1MA7 LINE L1 -22 6269 5876 712 155 83 6 chr5 202417559 202417727 -667805 + L1MD1 LINE L1 6456 6636 0 1977 133 17 13 chr5 202418404 202418705 -666827 + AluSq SINE Alu 1 302 -11 23 92 0 0 chr5 202419157 202419222 -666310 + AT_rich Low_complexity Low_complexity 1 65 0 1856 178 0 0 chr5 202419277 202419575 -665957 - AluSx SINE Alu -14 298 1 260 219 125 31 chr5 202420501 202420629 -664903 - MER5C DNA MER1_type -83 241 102 1484 190 0 49 chr5 202420742 202421026 -664506 - AluJo SINE Alu -34 278 9 266 271 0 0 chr5 202421120 202421179 -664353 - MIR SINE MIR -153 109 51 2297 100 13 0 chr5 202421624 202421923 -663609 - AluY SINE Alu -8 303 1 2381 80 3 3 chr5 202422429 202422728 -662804 - AluY SINE Alu -12 299 1 1344 280 22 34 chr5 202423313 202423809 -661723 + L1ME1 LINE L1 44 533 -5863 744 163 46 7 chr5 202423828 202423981 -661551 + L1MB8 LINE L1 6004 6162 -16 1141 99 0 0 chr5 202424062 202424204 -661328 + AluSq/x SINE Alu 1 142 -170 2280 108 10 0 chr5 202424307 202424612 -660920 - AluSx SINE Alu -4 308 1 1301 157 21 47 chr5 202424726 202425043 -660489 + Tigger4(Zombi) DNA MER2_type 32 2731 0 958 246 81 79 chr5 202425048 202425653 -659879 + L1ME1 LINE L1 1664 2269 -4127 1141 71 7 7 chr5 202425655 202425796 -659736 + AluSc SINE Alu 1 141 -168 1989 214 88 81 chr5 202425806 202426693 -658839 + L1ME1 LINE L1 5347 6231 -4 1050 152 0 24 chr5 202426872 202427037 -658495 - FRAM SINE Alu -16 160 1 2530 58 0 3 chr5 202427738 202428031 -657501 + AluY SINE Alu 1 292 -19 229 303 131 6 chr5 202428081 202428256 -657276 + L1ME LINE L1 5465 5661 -460 2150 102 0 14 chr5 202428485 202428802 -656730 + AluY SINE Alu 1 311 0 2303 104 0 0 chr5 202429279 202429576 -655956 + AluSx SINE Alu 1 297 -15 271 265 79 11 chr5 202429619 202429808 -655724 + L1MCa LINE L1 1368 1569 -4857 617 191 44 15 chr5 202429857 202429993 -655539 + FAM SINE Alu 27 166 -19 423 107 12 24 chr5 202430001 202430085 -655447 + Alu SINE Alu 229 311 -1 2571 77 0 3 chr5 202430092 202430402 -655130 + AluY SINE Alu 1 309 -2 2237 109 3 0 chr5 202430408 202430701 -654831 + AluSg SINE Alu 1 294 -16 712 240 146 48 chr5 202430733 202431098 -654434 + L1MCa LINE L1 1777 2188 -4419 1808 155 73 0 chr5 202431098 202431439 -654093 - MER47A DNA MER2_type 0 366 1 712 240 146 48 chr5 202431439 202431485 -654047 + L1MCa LINE L1 2188 2228 -4379 233 163 0 20 chr5 202431485 202431534 -653998 + L1MCa LINE L1 2437 2484 -4123 2732 55 0 0 chr5 202431955 202432265 -653267 + AluY SINE Alu 1 310 -1 314 188 0 146 chr5 202432522 202432618 -652914 - FLAM SINE Alu -22 111 50 2163 128 0 3 chr5 202432625 202432921 -652611 - AluSc SINE Alu -12 297 3 1007 183 39 159 chr5 202432925 202433092 -652440 - AluSg SINE Alu -7 293 108 321 26 0 0 chr5 202433100 202433138 -652394 + (TA)n Simple_repeat Simple_repeat 1 38 0 1888 120 38 24 chr5 202433138 202433421 -652111 - AluSx SINE Alu -22 290 1 1007 183 39 159 chr5 202433421 202433486 -652046 - AluSg SINE Alu -192 108 109 2359 86 0 3 chr5 202433486 202433789 -651743 + AluYa5 SINE Alu 1 302 -9 1007 183 39 159 chr5 202433789 202433888 -651644 - AluSg SINE Alu -190 110 1 509 239 85 11 chr5 202433946 202434206 -651326 + L1MC1 LINE L1 4330 4608 -1538 * 3060 158 62 8 chr5 202434204 202434902 -650630 + L1MC1 LINE L1 5148 5886 -447 1571 168 14 48 chr5 202434903 202435215 -650317 + AluJb SINE Alu 1 302 0 692 163 121 21 chr5 202435216 202435357 -650175 + AluJo/FRAM SINE Alu 136 290 -22 4841 130 51 10 chr5 202435357 202435524 -650008 + L1PB4 LINE L1 5132 5291 -865 2407 75 13 10 chr5 202435524 202435830 -649702 + AluY SINE Alu 1 307 -4 4841 130 51 10 chr5 202435830 202436628 -648904 + L1PB4 LINE L1 5291 6135 -21 231 133 0 0 chr5 202438036 202438081 -647451 + L1PB4 LINE L1 6112 6156 0 1571 180 3 27 chr5 202438115 202438415 -647117 + AluJo SINE Alu 13 305 -7 4287 143 116 27 chr5 202438456 202438473 -647059 + MER21A LTR ERV1 9 23 -908 288 0 0 0 chr5 202438473 202438505 -647027 + (TA)n Simple_repeat Simple_repeat 2 33 0 4287 143 116 27 chr5 202438505 202439329 -646203 + MER21A LTR ERV1 23 925 -6 180 308 58 0 chr5 202439725 202439777 -645755 + L2 LINE L2 1422 1476 -1838 9530 56 15 72 chr5 202439816 202441251 -644281 + SVA Other Other 34 1386 0 239 356 68 20 chr5 202441454 202441600 -643932 + L2 LINE L2 3115 3267 -5 440 297 134 38 chr5 202441601 202441840 -643692 + L3 LINE CR1 1249 1510 -67 2031 102 39 0 chr5 202442602 202442887 -642645 - AluSg SINE Alu -14 296 1 715 240 227 44 chr5 202442907 202443201 -642331 + L1MC5 LINE L1 6692 6931 -1030 2259 70 0 24 chr5 202443201 202443520 -642012 + AluY SINE Alu 1 311 0 715 240 227 44 chr5 202443520 202443683 -641849 + L1MC5 LINE L1 6931 7233 -728 1930 137 52 27 chr5 202443737 202444066 -641466 - MER1B DNA MER1_type 0 337 1 325 194 39 90 chr5 202444146 202444301 -641231 + L1MC5 LINE L1 7261 7407 -554 270 186 139 0 chr5 202444293 202444379 -641153 + L1MB2 LINE L1 6072 6169 -2 * 290 295 109 32 chr5 202444393 202444659 -640873 + L1MC5 LINE L1 7383 7682 -279 1332 158 99 11 chr5 202444659 202444931 -640601 + AluJb SINE Alu 4 299 -13 290 295 109 32 chr5 202444931 202445003 -640529 + L1MC5 LINE L1 7682 7747 -214 1805 232 200 57 chr5 202445008 202445717 -639815 + L2 LINE L2 1045 1918 -1396 763 235 0 7 chr5 202445717 202445870 -639662 + FRAM SINE Alu 1 152 -14 1805 232 200 57 chr5 202445870 202446081 -639451 + L2 LINE L2 1918 2097 -1217 388 288 86 14 chr5 202446092 202446231 -639301 - MIR SINE MIR -112 150 2 1882 123 7 13 chr5 202446259 202446560 -638972 - AluJb SINE Alu -13 299 1 1918 203 98 18 chr5 202448587 202449026 -636506 - MER21B LTR ERV1 -11 852 379 700 172 16 8 chr5 202449029 202449157 -636375 + AluJb SINE Alu 165 293 -19 4586 105 48 75 chr5 202449157 202449401 -636131 + L1PA16 LINE L1 5361 5610 -556 1330 183 55 15 chr5 202449401 202449675 -635857 + AluSq SINE Alu 1 285 -28 4586 105 48 75 chr5 202449675 202450249 -635283 + L1PA16 LINE L1 5610 6157 -9 949 714 0 196 chr5 202450230 202450352 -635180 + L1ME2 LINE L1 5567 5815 -349 * 2973 120 70 81 chr5 202450352 202450676 -634856 + LTR24C LTR ERV1 1 327 -308 1790 147 21 0 chr5 202450676 202450991 -634541 + AluSx SINE Alu 2 312 0 2973 120 70 81 chr5 202450991 202451156 -634376 + LTR24C LTR ERV1 327 484 -151 2237 88 0 0 chr5 202451156 202451450 -634082 - AluSc SINE Alu -15 294 1 2973 120 70 81 chr5 202451450 202451601 -633931 + LTR24C LTR ERV1 484 635 0 949 714 0 196 chr5 202451601 202451678 -633854 + L1ME2 LINE L1 5815 5971 -193 1928 153 3 0 chr5 202451678 202451978 -633554 + AluSx SINE Alu 1 301 -11 949 714 0 196 chr5 202451978 202452292 -633240 + L1ME2 LINE L1 5971 6164 0 252 172 35 17 chr5 202452417 202452475 -633057 + MER65A LTR ERV1 1 59 -386 272 268 33 52 chr5 202452588 202452741 -632791 + MER65A LTR ERV1 249 398 -47 769 125 9 0 chr5 202452811 202452923 -632609 + FLAM_C SINE Alu 13 125 -18 1153 175 88 16 chr5 202453023 202453274 -632258 + AluJo SINE Alu 14 282 -30 720 268 112 13 chr5 202453367 202453681 -631851 + L1MC4 LINE L1 6712 7056 -986 2190 95 7 0 chr5 202453967 202454271 -631261 + AluSc SINE Alu 1 306 -3 1407 194 46 3 chr5 202454380 202454664 -630868 + AluJb SINE Alu 1 296 -16 231 274 209 33 chr5 202454931 202455084 -630448 + L1MC4 LINE L1 7498 7677 -365 2179 88 3 7 chr5 202455319 202455616 -629916 + AluSc SINE Alu 1 296 -13 1335 167 39 16 chr5 202455626 202455884 -629648 + AluJb SINE Alu 29 292 -20 940 133 266 83 chr5 202456422 202456663 -628869 - AluJo SINE Alu -17 285 1 380 280 11 0 chr5 202457021 202457114 -628418 - L2 LINE L2 -2 3270 3177 1790 98 4 4 chr5 202457378 202457633 -627899 - AluSg SINE Alu -31 279 25 1535 139 43 29 chr5 202457682 202457797 -627735 + AluJb SINE Alu 12 124 -188 2235 50 3 3 chr5 202457797 202458125 -627407 + AluY SINE Alu 1 328 0 2028 99 16 26 chr5 202458127 202458440 -627092 + AluSg SINE Alu 1 310 0 1535 139 43 29 chr5 202458440 202458601 -626931 + AluJb SINE Alu 124 296 -16 2122 87 0 7 chr5 202458602 202458900 -626632 + AluY SINE Alu 1 296 -15 2145 111 3 3 chr5 202458901 202459208 -626324 + AluSx SINE Alu 1 307 -5 726 178 0 30 chr5 202459878 202460002 -625530 + FLAM_A SINE Alu 1 122 -180 1784 144 10 19 chr5 202460002 202460179 -625353 - AluJb SINE Alu -3 309 135 2175 97 0 0 chr5 202460179 202460469 -625063 - AluY SINE Alu -21 290 1 1784 144 10 19 chr5 202460469 202460603 -624929 - AluJb SINE Alu -177 135 1 2049 127 0 0 chr5 202460696 202460987 -624545 + AluSq SINE Alu 3 293 -20 1034 138 0 0 chr5 202461495 202461655 -623877 + FAM SINE Alu 1 49 0 475 136 68 11 chr5 202461996 202462084 -623448 + AluJo SINE Alu 44 136 -176 1475 121 135 32 chr5 202462084 202462366 -623166 + AluSp SINE Alu 1 311 -2 1709 163 19 10 chr5 202462370 202462677 -622855 + AluJb SINE Alu 1 310 -2 1986 132 10 0 chr5 202462679 202462982 -622550 + AluSg SINE Alu 1 306 -4 21 0 0 0 chr5 202462982 202463003 -622529 + AT_rich Low_complexity Low_complexity 1 21 0 804 220 23 0 chr5 202463008 202463181 -622351 + AluJb SINE Alu 133 309 -3 2080 112 0 3 chr5 202463189 202463485 -622047 + AluSc SINE Alu 1 295 -14 2033 137 145 8 chr5 202463749 202464122 -621410 + MSTA LTR MaLR 1 424 -4 2128 101 0 7 chr5 202464183 202464481 -621051 - AluSq SINE Alu -17 296 1 180 246 175 0 chr5 202465239 202465296 -620236 - L2 LINE L2 -14 3299 3233 * 792 249 107 4 chr5 202465284 202465517 -620015 - MIR SINE MIR -1 261 5 703 232 49 32 chr5 202465518 202465703 -619829 - MIR SINE MIR -56 206 19 235 204 0 19 chr5 202465886 202465940 -619592 - Charlie1 DNA MER1_type 0 2761 2709 2338 63 0 3 chr5 202465950 202466250 -619282 + AluY SINE Alu 1 299 -12 2190 56 3 7 chr5 202466261 202466546 -618986 + AluY SINE Alu 20 303 -8 2104 77 3 7 chr5 202466557 202466842 -618690 + AluY SINE Alu 20 303 -8 764 156 110 23 chr5 202466848 202467066 -618466 - Charlie1 DNA MER1_type -56 2705 2469 2141 82 10 10 chr5 202467892 202468195 -617337 + AluSc SINE Alu 1 303 -6 392 249 207 61 chr5 202468198 202468232 -617300 + MIR SINE MIR 3 31 -231 2050 111 3 7 chr5 202468232 202468539 -616993 + AluSq SINE Alu 1 306 -7 392 249 207 61 chr5 202468539 202468717 -616815 + MIR SINE MIR 31 246 -16 241 336 80 32 chr5 202470770 202470895 -614637 + L2 LINE L2 2938 3068 -204 1275 90 17 0 chr5 202471163 202471341 -614191 + AluY SINE Alu 131 311 0 1269 187 87 10 chr5 202471355 202471680 -613852 + AluJo SINE Alu 1 347 0 1884 108 52 7 chr5 202472676 202472963 -612569 + AluSq SINE Alu 1 300 -13 2249 87 3 0 chr5 202473707 202474005 -611527 - AluSp SINE Alu -14 299 1 2116 108 7 0 chr5 202474424 202474720 -610812 - AluSx SINE Alu -13 299 2 562 159 140 0 chr5 202475103 202475210 -610322 - FLAM_C SINE Alu -20 123 2 1559 156 35 3 chr5 202475564 202475853 -609679 + AluJo SINE Alu 1 298 -14 32 0 0 0 chr5 202476801 202476833 -608699 + GC_rich Low_complexity Low_complexity 1 32 0 272 127 18 0 chr5 202477265 202477320 -608212 + (CCG)n Simple_repeat Simple_repeat 2 57 0 283 253 22 11 chr5 202477567 202477658 -607874 + CT-rich Low_complexity Low_complexity 4 95 0 2322 57 0 0 chr5 202477734 202478031 -607501 - AluY SINE Alu -14 297 1 2069 102 0 16 chr5 202478544 202478848 -606684 + AluSp SINE Alu 1 299 -14 2020 96 6 42 chr5 202479487 202479799 -605733 + AluSx SINE Alu 1 301 -11 410 225 266 23 chr5 202480053 202480271 -605261 - MLT1H LTR MaLR -255 294 24 467 293 156 5 chr5 202480502 202480707 -604825 - MLT1K LTR MaLR -128 460 225 317 259 47 0 chr5 202480920 202481005 -604527 + MLT1K LTR MaLR 494 582 -6 1981 185 112 39 chr5 202481036 202481379 -604153 - LTR26E LTR ERV1 -1 621 305 2171 125 0 0 chr5 202481379 202481684 -603848 - AluSg SINE Alu -5 305 1 1981 185 112 39 chr5 202481684 202481706 -603826 - LTR26E LTR ERV1 -317 305 286 1597 143 32 4 chr5 202481706 202481985 -603547 - AluJb SINE Alu -25 287 1 1981 185 112 39 chr5 202481985 202482137 -603395 - LTR26E LTR ERV1 -336 286 65 734 206 42 6 chr5 202532824 202532989 -552543 - MER5A DNA MER1_type 0 189 19 849 121 35 0 chr5 202534239 202534355 -551177 - FRAM SINE Alu -56 120 1 889 189 12 12 chr5 202534553 202534717 -550815 + FRAM SINE Alu 2 165 -1 363 295 96 39 chr5 202535186 202535593 -549939 + HAL1b LINE L1 47 476 -872 2351 200 39 4 chr5 202535674 202536464 -549068 + L1M3 LINE L1 4760 5579 -601 338 342 44 31 chr5 202536681 202536906 -548626 + HAL1b LINE L1 684 911 -437 21 36 0 0 chr5 202537084 202537112 -548420 + AT_rich Low_complexity Low_complexity 1 28 0 2205 124 0 0 chr5 202537306 202537605 -547927 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr5 202537615 202537636 -547896 + AT_rich Low_complexity Low_complexity 1 21 0 876 140 67 0 chr5 202537778 202537928 -547604 + U1 snRNA snRNA 5 164 -1 50 0 0 0 chr5 202537928 202537978 -547554 + AT_rich Low_complexity Low_complexity 1 50 0 305 320 58 27 chr5 202538223 202538609 -546923 + L1MC4 LINE L1 4742 5140 -1006 433 223 68 20 chr5 202538754 202538902 -546630 + L1MC4 LINE L1 5313 5467 -2341 933 267 56 33 chr5 202538932 202539269 -546263 + L1MC4 LINE L1 5532 5876 -1932 352 142 35 9 chr5 202539321 202539338 -546194 + (TA)n Simple_repeat Simple_repeat 2 17 -100 2445 90 6 0 chr5 202539338 202539649 -545883 + AluSq SINE Alu 1 313 0 352 142 35 9 chr5 202539649 202539744 -545788 + (TA)n Simple_repeat Simple_repeat 17 117 0 831 139 9 0 chr5 202539776 202539891 -545641 + FLAM_C SINE Alu 2 117 -16 215 323 0 0 chr5 202540995 202541057 -544475 + L2 LINE L2 3248 3309 -4 4801 151 54 54 chr5 202542207 202543149 -542383 - L1MA9 LINE L1 -25 6287 5343 2120 101 11 0 chr5 202543149 202543436 -542096 - AluSx SINE Alu -22 290 1 4801 151 54 54 chr5 202543436 202543522 -542010 - L1MA9 LINE L1 -968 5344 5259 1583 166 46 9 chr5 202543503 202543829 -541703 - L1MA9 LINE L1 -1742 4404 4067 * 245 286 22 0 chr5 202543869 202543960 -541572 - L1MC4 LINE L1 -1336 6706 6614 225 230 0 100 chr5 202543886 202543986 -541546 + L1MC4 LINE L1 6614 6703 -1339 * 292 234 11 32 chr5 202543982 202544076 -541456 + L1MC4 LINE L1 6614 6705 -1337 291 191 0 0 chr5 202544078 202544146 -541386 + (TA)n Simple_repeat Simple_repeat 2 69 0 288 215 0 75 chr5 202544173 202544266 -541266 - L1MC4 LINE L1 -1343 6699 6614 310 293 37 107 chr5 202545152 202545422 -540110 + MIR SINE MIR 12 262 0 198 0 0 0 chr5 202545444 202545466 -540066 + (A)n Simple_repeat Simple_repeat 1 22 0 376 280 56 16 chr5 202545684 202545809 -539723 + MIR SINE MIR 58 187 -75 2311 90 0 32 chr5 202546884 202547195 -538337 + AluSq SINE Alu 1 301 -12 221 416 36 7 chr5 202548410 202548547 -536985 + MIR SINE MIR 10 150 -112 216 97 0 0 chr5 202548902 202548933 -536599 + (CA)n Simple_repeat Simple_repeat 1 31 0 1751 112 0 43 chr5 202549138 202549396 -536136 + AluSq SINE Alu 5 251 -62 337 300 47 60 chr5 202549709 202549942 -535590 + L3 LINE CR1 326 555 -1022 282 281 89 52 chr5 202550008 202550143 -535389 + MIR SINE MIR 62 201 -61 334 331 79 0 chr5 202550186 202550313 -535219 + L2 LINE L2 3136 3272 0 2312 46 0 0 chr5 202550420 202550728 -534804 - AluY SINE Alu 0 308 1 313 322 28 21 chr5 202550763 202550906 -534626 + L3 LINE CR1 634 777 -800 402 318 217 13 chr5 202551532 202552089 -533443 + L2 LINE L2 1623 2293 -1021 2025 226 41 26 chr5 202552191 202552726 -532806 + MER74A LTR ERVL 15 557 -1 296 293 0 9 chr5 202552726 202552842 -532690 + L2 LINE L2 2286 2400 -914 755 142 80 167 chr5 202552951 202553190 -532342 + MER20 DNA MER1_type 1 218 -1 393 310 26 88 chr5 202553191 202553417 -532115 + L2 LINE L2 3034 3245 -27 705 319 71 54 chr5 202554549 202554704 -530828 + L3 LINE CR1 1034 1185 -392 543 158 39 47 chr5 202554704 202554831 -530701 - L1MA5 LINE L1 0 6300 6175 705 319 71 54 chr5 202554831 202555208 -530324 + L3 LINE CR1 1185 1575 -2 1328 161 132 22 chr5 202555342 202555615 -529917 - AluJo SINE Alu -9 303 1 385 320 99 0 chr5 202557802 202557983 -527549 + MIR SINE MIR 64 262 0 2176 182 64 10 chr5 202558179 202558663 -526869 - L1MB8 LINE L1 -2 6176 5667 28 0 0 0 chr5 202558683 202558711 -526821 + AT_rich Low_complexity Low_complexity 1 28 0 1590 198 24 0 chr5 202559013 202559311 -526221 + AluJo SINE Alu 1 305 -7 430 321 146 11 chr5 202559472 202559746 -525786 - L3 LINE CR1 -9 1568 1258 937 81 0 0 chr5 202559757 202559881 -525651 - AluY SINE Alu -11 300 177 226 197 295 0 chr5 202559881 202559942 -525590 - AluJ/FLAM SINE Alu -223 79 1 584 155 0 10 chr5 202559953 202560056 -525476 - L1MB2 LINE L1 -2 6169 6068 269 221 15 0 chr5 202560590 202560658 -524874 - L1MB2 LINE L1 -342 5828 5760 522 229 59 12 chr5 202560846 202561016 -524516 - L1MB8 LINE L1 -2328 5480 5303 10771 196 30 42 chr5 202561174 202564216 -521316 + L1M2a LINE L1 2 3009 -4159 295 327 27 20 chr5 202564337 202564458 -521074 - MIR SINE MIR -63 145 34 1847 130 0 0 chr5 202564577 202564839 -520693 - AluSg SINE Alu -10 300 39 6604 40 0 2 chr5 202564865 202565650 -519882 - L1PA4 LINE L1 -1 6154 5372 * 41820 47 5 0 chr5 202565643 202570732 -514800 - L1PA4 LINE L1 -1036 5110 1 914 253 90 23 chr5 202570743 202571341 -514191 + L1M1 LINE L1 3129 3780 -3785 * 4320 223 37 22 chr5 202571338 202572558 -512974 - L1MDa LINE L1 -1326 5080 3843 549 235 17 77 chr5 202572550 202572681 -512851 - L1MDa LINE L1 -3661 2745 2633 * 7335 151 16 24 chr5 202572681 202574672 -510860 + L1PA13 LINE L1 4177 6163 0 549 235 17 77 chr5 202574672 202574774 -510758 - L1MDa LINE L1 -3773 2633 2526 * 7406 139 13 14 chr5 202574765 202575705 -509827 - L1MA2 LINE L1 0 6304 5365 2159 119 0 3 chr5 202575705 202575999 -509533 - AluSx SINE Alu -19 293 1 7406 139 13 14 chr5 202575999 202577067 -508465 - L1MA2 LINE L1 -939 5365 4286 1261 223 51 42 chr5 202577075 202577418 -508114 - L1MDa LINE L1 -3890 2516 2167 1664 173 24 0 chr5 202577418 202577707 -507825 + AluJb SINE Alu 1 296 -16 1261 223 51 42 chr5 202577707 202577816 -507716 - L1MDa LINE L1 -4239 2167 2060 905 269 5 19 chr5 202577816 202578028 -507504 - MER82 DNA MER2_type 0 653 445 290 308 66 33 chr5 202578060 202578242 -507290 + MIR SINE MIR 1 188 -74 556 174 0 0 chr5 202578306 202578392 -507140 - MER82 DNA MER2_type -566 87 2 3559 202 50 84 chr5 202578400 202578597 -506935 - L1MDa LINE L1 -4358 2048 1846 6546 27 43 7 chr5 202578597 202579696 -505836 - SVA Other Other -955 1386 55 345 24 0 0 chr5 202579696 202579738 -505794 + (GGGAGA)n Simple_repeat Simple_repeat 3 44 0 3559 202 50 84 chr5 202579738 202580311 -505221 - L1MDa LINE L1 -4559 1847 1327 2271 94 3 0 chr5 202580311 202580618 -504914 - AluY SINE Alu 0 308 1 3559 202 50 84 chr5 202580618 202581051 -504481 - L1MDa LINE L1 -5079 1327 881 489 140 32 21 chr5 202581082 202581175 -504357 + MER4A LTR ERV1 1 94 -570 1779 142 9 27 chr5 202581178 202581530 -504002 + MER4A LTR ERV1 261 664 0 247 280 67 13 chr5 202581560 202581635 -503897 - L1MDa LINE L1 -5555 854 776 216 111 0 0 chr5 202581801 202581837 -503695 + (TC)n Simple_repeat Simple_repeat 1 36 0 2162 173 66 29 chr5 202581932 202582343 -503189 - MSTB LTR MaLR 0 426 1 5057 163 27 2 chr5 202582518 202583382 -502150 - L1MA6 LINE L1 -25 6275 5391 340 232 53 105 chr5 202584036 202584172 -501360 - L1MEd LINE L1 -4908 1211 1086 965 118 0 0 chr5 202584172 202584299 -501233 - FLAM_C SINE Alu -6 127 1 340 232 53 105 chr5 202584299 202584352 -501180 - L1MEd LINE L1 -5033 1086 1032 366 32 74 42 chr5 202584386 202584481 -501051 + (TTAA)n Simple_repeat Simple_repeat 4 101 0 480 132 77 0 chr5 202584732 202584823 -500709 - L1MB2 LINE L1 0 6171 6074 1073 217 125 27 chr5 202584853 202585190 -500342 - LTR37A LTR ERV1 -53 373 4 797 191 20 14 chr5 202585319 202585466 -500066 - L1PB4 LINE L1 -8 6148 6001 512 152 32 19 chr5 202585469 202585627 -499905 + (TCCA)n Simple_repeat Simple_repeat 3 162 0 321 190 0 0 chr5 202585675 202585733 -499799 - L2 LINE L2 -32 3281 3224 505 178 0 9 chr5 202585780 202585887 -499645 - L1PB4 LINE L1 -116 6040 5935 2234 118 13 0 chr5 202586040 202586345 -499187 - AluSx SINE Alu -3 309 1 2142 145 0 0 chr5 202586520 202586830 -498702 + AluSx SINE Alu 1 310 -2 2497 141 100 71 chr5 202586875 202587519 -498013 + MER4A LTR ERV1 1 872 0 1654 200 0 10 chr5 202588499 202588794 -496738 + AluJo SINE Alu 2 293 -19 216 0 0 0 chr5 202588795 202588819 -496713 + (GA)n Simple_repeat Simple_repeat 1 24 0 2460 105 0 3 chr5 202588892 202589205 -496327 + AluSx SINE Alu 1 312 0 274 190 0 101 chr5 202589350 202589429 -496103 + MER21A LTR ERV1 1 71 -860 1120 118 31 34 chr5 202589435 202589788 -495744 - MER4A-int LTR ERV1 -5765 833 372 1882 192 68 32 chr5 202589807 202590250 -495282 + LTR2B LTR ERV1 32 490 0 1906 144 89 11 chr5 202590250 202590598 -494934 - MER4A-int LTR ERV1 -6223 375 1 1770 161 179 57 chr5 202590598 202591190 -494342 - MER4A LTR ERV1 0 664 1 770 111 342 11 chr5 202591206 202591396 -494136 + MER21A LTR ERV1 11 263 -668 2260 154 94 76 chr5 202591402 202591942 -493590 + MER21A LTR ERV1 376 925 -6 2472 57 7 0 chr5 202592200 202592497 -493035 - AluY SINE Alu -12 299 1 297 274 19 9 chr5 202592861 202592967 -492565 + L1MC4 LINE L1 7936 8042 0 444 287 45 13 chr5 202593215 202593372 -492160 - MLT1F1 LTR MaLR -11 556 395 413 203 40 68 chr5 202593437 202593585 -491947 - MLT1F1 LTR MaLR -326 264 121 479 272 157 45 chr5 202594380 202594711 -490821 + MLT1J LTR MaLR 43 410 -101 581 239 137 26 chr5 202596397 202596631 -488901 + MIR SINE MIR 2 261 -1 2260 105 17 0 chr5 202597200 202597496 -488036 - AluSq SINE Alu -10 303 3 2137 118 0 14 chr5 202597554 202597850 -487682 - AluSg SINE Alu -18 292 1 317 319 136 50 chr5 202601395 202602017 -483515 + L1 LINE L1 4019 4733 -1413 1645 168 10 59 chr5 202602017 202602321 -483211 + AluJb SINE Alu 1 289 -23 317 319 136 50 chr5 202602321 202602535 -482997 + L1 LINE L1 4733 4927 -1219 538 185 138 83 chr5 202602544 202602778 -482754 + MSTB2 LTR MaLR 1 240 -192 1310 218 27 100 chr5 202602778 202603321 -482211 + L1ME1 LINE L1 5670 6178 0 682 183 82 53 chr5 202603410 202603618 -481914 + L1MC4 LINE L1 7819 8032 -10 279 259 106 0 chr5 202605056 202605141 -480391 + MIR SINE MIR 169 262 0 839 273 62 36 chr5 202605500 202605808 -479724 + MER46C DNA MER2_type 5 320 -18 346 316 70 53 chr5 202605915 202606270 -479262 + L2 LINE L2 2605 2965 -349 511 186 47 31 chr5 202606593 202606722 -478810 + MLT1G3 LTR MaLR 14 144 -451 * 697 271 254 6 chr5 202606702 202607052 -478480 + MLT1G3 LTR MaLR 92 563 -4 1088 260 117 61 chr5 202607176 202607734 -477798 - MLT1G1 LTR MaLR -6 589 1 184 274 88 18 chr5 202608392 202608505 -477027 + L3b LINE CR1 1105 1225 -358 374 326 45 0 chr5 202608525 202608657 -476875 + MIR3 SINE MIR 38 175 -33 25 31 0 0 chr5 202609712 202609744 -475788 + GC_rich Low_complexity Low_complexity 1 32 0 291 264 0 0 chr5 202609765 202609818 -475714 + G-rich Low_complexity Low_complexity 1 53 0 295 299 76 35 chr5 202611012 202611156 -474376 - MIR SINE MIR -71 191 42 2368 109 0 0 chr5 202612320 202612622 -472910 + AluSg SINE Alu 1 302 -8 2314 90 3 3 chr5 202612856 202613145 -472387 + AluSc SINE Alu 1 289 -20 216 247 178 34 chr5 202613298 202613444 -472088 + L3 LINE CR1 1332 1498 -79 205 306 197 68 chr5 202614844 202614991 -470541 - MIR3 SINE MIR -28 180 15 309 210 0 0 chr5 202615171 202615233 -470299 - L3 LINE CR1 -2 1575 1514 206 218 36 0 chr5 202616212 202616267 -469265 + (TA)n Simple_repeat Simple_repeat 2 58 0 205 191 21 75 chr5 202616999 202617093 -468439 + (CCCCAG)n Simple_repeat Simple_repeat 5 93 0 852 270 146 22 chr5 202618344 202619160 -466372 + L2 LINE L2 2349 3312 -1 273 98 0 0 chr5 202619487 202619528 -466004 + (CA)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 202619770 202619794 -465738 + AT_rich Low_complexity Low_complexity 1 24 0 407 284 151 4 chr5 202619878 202620103 -465429 - L1ME4a LINE L1 -281 5840 5583 262 262 145 11 chr5 202620141 202620438 -465094 - L1M2 LINE L1 -771 5520 5173 502 274 34 51 chr5 202621256 202621552 -463980 + L2 LINE L2 1940 2230 -1084 2036 117 105 66 chr5 202621554 202621597 -463935 - MSTC LTR MaLR -3 425 385 2314 109 0 10 chr5 202621597 202621910 -463622 + AluSg SINE Alu 1 310 0 2036 117 105 66 chr5 202621910 202622258 -463274 - MSTC LTR MaLR -43 385 19 321 356 69 0 chr5 202622258 202622432 -463100 + L2 LINE L2 2233 2418 -896 23 0 0 0 chr5 202622694 202622717 -462815 + AT_rich Low_complexity Low_complexity 1 23 0 2439 86 0 0 chr5 202623042 202623344 -462188 + AluSx SINE Alu 1 302 -10 205 261 15 15 chr5 202624023 202624088 -461444 + GA-rich Low_complexity Low_complexity 2 66 0 506 218 152 6 chr5 202626042 202626207 -459325 + MIR SINE MIR 47 235 -27 300 332 62 70 chr5 202626208 202626464 -459068 - L1MEc LINE L1 -4315 2081 1828 300 229 112 56 chr5 202626293 202626472 -459060 + L1MC5 LINE L1 7576 7764 -197 213 263 0 35 chr5 202626499 202626556 -458976 - MIR3 SINE MIR -30 178 124 2352 69 0 0 chr5 202626809 202627140 -458392 - AluY SINE Alu 0 311 9 334 389 17 6 chr5 202628570 202628745 -456787 + MIR SINE MIR 15 191 -71 249 250 17 117 chr5 202628922 202629042 -456490 + MLT1I LTR MaLR 294 401 -8 2292 92 3 3 chr5 202629086 202629379 -456153 + AluSx SINE Alu 1 293 -19 920 273 107 15 chr5 202629388 202629846 -455686 + L1MC4a LINE L1 5826 6325 -1483 302 252 49 32 chr5 202629971 202630094 -455438 + L1MC4 LINE L1 6658 6782 -1260 329 292 15 0 chr5 202630105 202630235 -455297 + L1MC4a LINE L1 7108 7239 -569 668 292 111 41 chr5 202630994 202631508 -454024 + L1MC4 LINE L1 7492 8041 -1 488 220 126 38 chr5 202632426 202632668 -452864 - MLT1H LTR MaLR -41 368 112 417 257 59 0 chr5 202632762 202632898 -452634 + MLT1J LTR MaLR 113 256 -255 341 191 64 75 chr5 202633040 202633134 -452398 - L2 LINE L2 0 3313 3221 614 170 19 0 chr5 202633139 202633245 -452287 + L1MD2 LINE L1 6066 6173 -186 260 220 0 0 chr5 202633437 202633487 -452045 + MER94 DNA DNA 1 50 -84 233 257 14 14 chr5 202634116 202634186 -451346 - MLT1J LTR MaLR -292 219 150 8507 51 5 0 chr5 202634207 202635171 -450361 + LTR5 LTR ERVK 1 969 0 5285 109 52 47 chr5 202635369 202636532 -449000 + MER11A LTR ERVK 1 1266 0 345 297 67 18 chr5 202637298 202637463 -448069 + MLT1J LTR MaLR 248 420 -91 343 303 55 0 chr5 202637665 202637774 -447758 - MER67A LTR ERV1 -15 528 414 269 279 99 17 chr5 202637948 202638120 -447412 - MER67B LTR ERV1 -475 186 1 748 104 0 0 chr5 202638354 202638469 -447063 - AluSp/q SINE Alu -17 296 182 200 204 23 0 chr5 202638891 202638935 -446597 + CT-rich Low_complexity Low_complexity 1 45 0 796 109 0 0 chr5 202638936 202639046 -446486 + AluSp/q SINE Alu 192 301 -12 749 176 7 59 chr5 202639046 202639096 -446436 + MLT1D LTR MaLR 361 412 -93 1808 147 10 3 chr5 202639096 202639389 -446143 - AluJb SINE Alu -15 297 3 749 176 7 59 chr5 202639389 202639491 -446041 + MLT1D LTR MaLR 412 505 0 891 179 62 6 chr5 202639656 202639835 -445697 + MER5A DNA MER1_type 1 189 0 1149 183 86 26 chr5 202640029 202640147 -445385 + MLT1A1 LTR MaLR 21 131 -234 2168 102 3 0 chr5 202640147 202640441 -445091 + AluY SINE Alu 11 305 -6 1149 183 86 26 chr5 202640441 202640590 -444942 + MLT1A1 LTR MaLR 131 304 -61 2309 84 0 0 chr5 202640611 202640907 -444625 - AluSg SINE Alu -14 296 1 1426 243 103 22 chr5 202641013 202641420 -444112 + L2 LINE L2 2874 3313 0 251 314 78 10 chr5 202641841 202641943 -443589 + MIR3 SINE MIR 52 160 -48 1690 161 10 26 chr5 202643397 202643707 -441825 + AluSx SINE Alu 2 306 -6 403 314 62 26 chr5 202643732 202643958 -441574 + L1M4 LINE L1 2351 2584 -3562 725 240 25 110 chr5 202644677 202645085 -440447 - MER93b LTR ERV1 0 373 1 341 207 73 0 chr5 202645086 202645168 -440364 - L1MC5 LINE L1 -1133 6828 6741 283 313 0 0 chr5 202645219 202645283 -440249 + L2 LINE L2 3207 3270 -2 195 262 0 16 chr5 202645290 202645351 -440181 + L2 LINE L2 3178 3237 -76 1611 189 8 25 chr5 202645361 202645715 -439817 - L1MA7 LINE L1 -1 6290 5943 22 0 0 0 chr5 202645729 202645751 -439781 + AT_rich Low_complexity Low_complexity 1 22 0 675 146 14 0 chr5 202646286 202646512 -439020 + (CA)n Simple_repeat Simple_repeat 1 229 0 1445 116 0 0 chr5 202648335 202648533 -436999 - AluSx SINE Alu -114 198 1 2662 264 62 32 chr5 202648536 202648943 -436589 + ERVL LTR ERVL 2622 3015 -2639 776 183 15 0 chr5 202648943 202649074 -436458 - FLAM_A SINE Alu 0 133 1 2662 264 62 32 chr5 202649074 202649642 -435890 + ERVL LTR ERVL 3015 3644 -2010 1629 161 0 4 chr5 202649790 202650064 -435468 + AluSx SINE Alu 36 308 -4 261 247 52 13 chr5 202650209 202650286 -435246 + MIR SINE MIR 170 249 -13 451 312 7 22 chr5 202650465 202650603 -434929 + L2 LINE L2 3136 3271 -1 407 293 34 72 chr5 202650612 202650875 -434657 - MLT1L LTR MaLR -125 490 238 1079 172 11 5 chr5 202651010 202651196 -434336 - MER20 DNA MER1_type -2 217 31 517 212 42 17 chr5 202651858 202651976 -433556 + MIR SINE MIR 113 233 -29 713 270 34 0 chr5 202652292 202652470 -433062 + MIR SINE MIR 69 252 -10 208 238 238 0 chr5 202653177 202653261 -432271 + MIR SINE MIR 49 152 -110 330 308 50 8 chr5 202654286 202654406 -431126 + MIR3 SINE MIR 13 137 -71 592 260 8 0 chr5 202654679 202654802 -430730 - L2 LINE L2 0 3313 3190 1541 149 4 14 chr5 202654942 202655217 -430315 + AluSx SINE Alu 1 272 -40 1923 196 48 3 chr5 202655417 202655794 -429738 + MSTD LTR MaLR 1 394 -2 493 202 44 18 chr5 202655829 202655943 -429589 + MIR3 SINE MIR 50 166 -42 1788 147 14 0 chr5 202656266 202656559 -428973 - AluSx SINE Alu -15 297 1 1900 137 10 0 chr5 202656760 202657059 -428473 + AluSq SINE Alu 1 302 -11 1951 119 11 0 chr5 202657070 202657373 -428159 + AluSx SINE Alu 4 309 0 247 266 78 23 chr5 202657388 202657516 -428016 + L1MC/D LINE L1 5617 5751 -2057 182 275 92 46 chr5 202657611 202657720 -427812 + MIR SINE MIR 13 126 -136 325 192 68 14 chr5 202658474 202658547 -426985 + MER112 DNA MER1_type 1 77 -183 484 251 32 43 chr5 202658591 202658778 -426754 + MER112 DNA MER1_type 65 249 -11 302 139 0 0 chr5 202660122 202660165 -425367 + Alu SINE Alu 2 44 -258 676 255 74 55 chr5 202660312 202660413 -425119 + Charlie8 DNA MER1_type 1 99 -242 2006 115 20 0 chr5 202660413 202660709 -424823 - AluSx SINE Alu -10 302 1 676 255 74 55 chr5 202660709 202660878 -424654 + Charlie8 DNA MER1_type 99 276 -65 190 280 13 27 chr5 202661197 202661272 -424260 + MIR SINE MIR 34 107 -101 239 158 0 18 chr5 202661276 202661333 -424199 + CT-rich Low_complexity Low_complexity 1 56 0 1520 107 0 0 chr5 202661370 202661576 -423956 - AluSq SINE Alu -18 295 90 343 303 0 0 chr5 202661677 202661776 -423756 + (CA)n Simple_repeat Simple_repeat 1 99 0 601 290 67 16 chr5 202661776 202661969 -423563 - MIR SINE MIR -11 251 49 1120 151 0 0 chr5 202662102 202662274 -423258 + AluJb SINE Alu 129 300 -12 1142 113 123 5 chr5 202662276 202662471 -423061 + AluSg/x SINE Alu 86 303 -9 392 300 110 20 chr5 202662514 202662714 -422818 + MIR SINE MIR 33 250 -12 236 272 33 73 chr5 202663326 202663452 -422080 - MIR3 SINE MIR -53 155 34 444 244 168 50 chr5 202664036 202664298 -421234 + LTR16A1 LTR ERVL 146 438 -19 37 0 0 0 chr5 202664298 202664335 -421197 + AT_rich Low_complexity Low_complexity 1 37 0 2087 112 0 0 chr5 202664335 202664620 -420912 - AluSx SINE Alu -27 285 1 318 202 24 24 chr5 202664648 202664732 -420800 - MIR SINE MIR -126 136 53 735 295 92 49 chr5 202665341 202665843 -419689 + L2 LINE L2 2766 3272 0 579 223 18 0 chr5 202666003 202666115 -419417 + MER81 DNA DNA 1 114 0 263 287 0 46 chr5 202666177 202666264 -419268 + MER63 DNA MER1_type 27 735 -327 1665 159 18 0 chr5 202666336 202666642 -418890 - AluJo SINE Alu 0 311 1 1000 251 30 0 chr5 202667096 202667331 -418201 + MIR SINE MIR 14 255 -7 1990 108 3 29 chr5 202667584 202667890 -417642 + AluSx SINE Alu 1 298 -14 206 195 0 0 chr5 202668000 202668041 -417491 + MIR SINE MIR 58 98 -110 1635 216 8 40 chr5 202668063 202668409 -417123 - MLT1B LTR MaLR 0 390 56 1214 118 39 0 chr5 202668409 202668587 -416945 + MER30 DNA MER1_type 2 186 -44 1379 211 3 0 chr5 202668716 202669015 -416517 + AluSg SINE Alu 8 307 -3 539 256 191 52 chr5 202669034 202669174 -416358 + L2 LINE L2 2551 2670 -643 1849 155 0 7 chr5 202669174 202669471 -416061 + AluSx SINE Alu 1 295 -17 539 256 191 52 chr5 202669471 202669930 -415602 + L2 LINE L2 2670 3298 -15 270 0 0 0 chr5 202669930 202669960 -415572 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 539 256 191 52 chr5 202669960 202669973 -415559 + L2 LINE L2 3298 3308 -5 1140 113 16 0 chr5 202670577 202670763 -414769 - AluY SINE Alu -15 296 108 221 317 0 0 chr5 202670893 202670953 -414579 - MIR SINE MIR -157 105 46 685 195 0 0 chr5 202670971 202671099 -414433 + MSTD LTR MaLR 269 396 0 234 288 0 0 chr5 202671149 202671222 -414310 + L1P5 LINE L1 5375 5447 -704 * 243 271 225 0 chr5 202671219 202671348 -414184 + L1ME LINE L1 5623 5780 -390 * 2373 170 34 2 chr5 202671337 202672605 -412927 + L1MA7 LINE L1 4906 6290 -1 272 133 0 0 chr5 202672626 202672671 -412861 - L1MA5A LINE L1 -8 6289 6245 272 155 34 0 chr5 202672726 202672792 -412740 - L1MA5A LINE L1 -8 6290 6219 2315 76 6 13 chr5 202673389 202673704 -411828 - AluSq SINE Alu 0 313 1 606 116 51 94 chr5 202674251 202674389 -411143 + AluSp/q SINE Alu 176 307 -6 324 180 0 137 chr5 202674465 202674626 -410906 - LOR1-int LTR ERV1 -3818 4302 4164 350 379 12 38 chr5 202674708 202674948 -410584 - L1M4 LINE L1 -2339 3807 3574 837 121 0 0 chr5 202676464 202676588 -408944 - AluSg/x SINE Alu -15 295 172 1901 147 3 3 chr5 202676706 202677018 -408514 + AluSx SINE Alu 1 312 0 722 270 93 29 chr5 202677039 202677521 -408011 + L1MC2 LINE L1 3064 3576 -2570 * 1074 269 29 13 chr5 202677503 202677878 -407654 + L1MC2 LINE L1 5588 5968 -1817 806 211 110 20 chr5 202677906 202678152 -407380 + L1MC2 LINE L1 6040 6307 -37 238 140 0 100 chr5 202678670 202678692 -406840 + MER75 DNA T2_type 469 485 -29 2313 238 32 78 chr5 202678692 202679707 -405825 - LTR5 LTR ERVK 0 969 1 238 140 0 100 chr5 202679707 202679734 -405798 + MER75 DNA T2_type 485 513 -1 3101 134 45 10 chr5 202679741 202680250 -405282 + MER1A DNA MER1_type 1 527 0 307 315 99 28 chr5 202680425 202680606 -404926 + MIR SINE MIR 13 206 -56 187 281 56 22 chr5 202681410 202681499 -404033 + L2 LINE L2 2968 3059 -213 22 0 0 0 chr5 202683199 202683221 -402311 + AT_rich Low_complexity Low_complexity 1 22 0 1462 211 13 0 chr5 202683221 202683520 -402012 - L1 LINE L1 -2015 4131 3829 * 4287 241 31 53 chr5 202683511 202684036 -401496 + L1MB2 LINE L1 3205 3740 -2406 1128 111 0 0 chr5 202684036 202684209 -401323 + AluY SINE Alu 129 301 0 4287 241 31 53 chr5 202684209 202685299 -400233 + L1MB2 LINE L1 3740 4835 -1311 1241 292 68 17 chr5 202685310 202685721 -399811 + MER70B LTR ERVL 4 435 -143 608 236 75 0 chr5 202685849 202686010 -399522 + L1MB2 LINE L1 4848 5020 -1126 * 990 165 72 0 chr5 202685985 202686179 -399353 + L1PA13 LINE L1 3712 3919 -2227 226 0 0 0 chr5 202686186 202686210 -399322 + AluY SINE Alu 21 44 -259 4566 118 7 1 chr5 202686211 202686886 -398646 + L1PA13 LINE L1 5471 6149 -14 814 205 6 0 chr5 202686896 202687067 -398465 + L1MB2 LINE L1 5026 5197 -949 3211 219 68 31 chr5 202687068 202687486 -398046 - MSTB-int LTR MaLR -824 827 426 1988 125 30 0 chr5 202687486 202687789 -397743 + AluSq SINE Alu 2 313 0 3211 219 68 31 chr5 202687789 202688168 -397364 - MSTB-int LTR MaLR -1225 426 1 2422 172 52 2 chr5 202688168 202688574 -396958 - MSTB LTR MaLR 0 426 1 2955 205 28 7 chr5 202688579 202689194 -396338 + L1MB2 LINE L1 5254 5881 -302 5296 67 15 0 chr5 202689194 202689866 -395666 + MER11B LTR ERVK 1 682 -554 2018 79 18 7 chr5 202689865 202690144 -395388 + MER11B LTR ERVK 951 1232 -4 * 1340 156 44 44 chr5 202690149 202690444 -395088 + L1MB2 LINE L1 5875 6169 -2 247 268 89 9 chr5 202690955 202691067 -394465 + L1M4 LINE L1 4531 4651 -1495 25 0 0 0 chr5 202691114 202691139 -394393 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 202691232 202691263 -394269 + AT_rich Low_complexity Low_complexity 1 31 0 6855 70 7 15 chr5 202691326 202691944 -393588 + L1PA7 LINE L1 4752 5374 -780 2240 119 0 0 chr5 202691944 202692247 -393285 + AluSc SINE Alu 4 306 -3 6855 70 7 15 chr5 202692247 202693039 -392493 + L1PA7 LINE L1 5374 6151 -3 1268 206 104 0 chr5 202693937 202694292 -391240 - Charlie5 DNA MER1_type 0 2624 2233 264 143 48 0 chr5 202694295 202694358 -391174 - Charlie5 DNA MER1_type -2497 115 50 2231 166 30 38 chr5 202694500 202694604 -390928 - L1PA16 LINE L1 -35 6131 6028 2143 36 0 16 chr5 202694604 202694890 -390642 - AluY SINE Alu 0 318 37 2231 166 30 38 chr5 202694890 202695255 -390277 - L1PA16 LINE L1 -138 6028 5666 1633 112 7 53 chr5 202695373 202695401 -390131 - L1MA2 LINE L1 0 6304 6276 195 42 0 0 chr5 202695401 202695425 -390107 + (TG)n Simple_repeat Simple_repeat 2 25 0 1633 112 7 53 chr5 202695425 202695681 -389851 - L1MA2 LINE L1 -28 6276 6033 359 250 155 34 chr5 202695954 202696218 -389314 - L1MC4 LINE L1 -974 7068 6773 2465 60 0 7 chr5 202696218 202696519 -389013 + AluY SINE Alu 1 299 -12 2017 136 7 3 chr5 202696524 202696834 -388698 + AluSx SINE Alu 1 311 -1 794 95 0 0 chr5 202697799 202697904 -387628 + L1MB1 LINE L1 6064 6168 0 181 317 0 73 chr5 202697933 202698015 -387517 + MIR3 SINE MIR 8 83 -125 480 208 71 77 chr5 202698308 202698476 -387056 - MER58B DNA MER1_type 0 341 175 558 238 72 6 chr5 202698478 202698659 -386873 - L1M4c LINE L1 -5037 1347 1155 291 257 9 0 chr5 202699383 202699479 -386053 - L1M3c LINE L1 -4717 1596 1080 2415 248 29 36 chr5 202699482 202700598 -384934 + L1MB5 LINE L1 1182 2397 -3985 672 260 0 0 chr5 202700598 202700721 -384811 + FLAM_A SINE Alu 1 123 -10 2415 248 29 36 chr5 202700721 202700954 -384578 + L1MB5 LINE L1 2397 2630 -3752 841 222 43 12 chr5 202700968 202701225 -384307 - L1M4 LINE L1 -3219 2927 2663 365 225 32 25 chr5 202701202 202701345 -384187 - L1MB5 LINE L1 -3053 3093 2952 * 1404 226 44 3 chr5 202701345 202701735 -383797 + L1MB5 LINE L1 3303 3708 -2674 5744 128 23 18 chr5 202701736 202702342 -383190 + MER4D LTR ERV1 1 615 -288 2981 93 10 2 chr5 202702342 202702741 -382791 - L1PA13 LINE L1 0 6163 5762 5744 128 23 18 chr5 202702741 202703032 -382500 + MER4D LTR ERV1 615 903 0 1251 218 5 108 chr5 202703042 202703460 -382072 + L1MB5 LINE L1 3726 4100 -2282 1422 232 64 42 chr5 202703461 202703913 -381619 - MLT1C LTR MaLR 0 467 6 5441 221 54 11 chr5 202703917 202705332 -380200 + L1MB5 LINE L1 4096 5572 -810 1010 289 92 10 chr5 202705332 202705743 -379789 - MLT1C LTR MaLR 0 467 23 3272 194 34 12 chr5 202705763 202706438 -379094 + L1MB5 LINE L1 5568 6257 -153 242 279 193 25 chr5 202706457 202706783 -378749 + L1M4 LINE L1 4390 4770 -1376 1676 136 81 0 chr5 202707499 202707757 -377775 - AluSx SINE Alu -13 299 21 186 43 0 0 chr5 202708102 202708125 -377407 + (CAGG)n Simple_repeat Simple_repeat 2 24 0 2051 168 31 23 chr5 202708213 202708600 -376932 + MLT1B LTR MaLR 1 390 0 236 151 94 0 chr5 202708993 202709046 -376486 - MIR SINE MIR -111 151 94 41 36 0 0 chr5 202709046 202709101 -376431 + AT_rich Low_complexity Low_complexity 1 55 0 215 31 92 61 chr5 202709102 202709200 -376332 + (TTAA)n Simple_repeat Simple_repeat 2 102 0 228 359 0 0 chr5 202709207 202709271 -376261 - MIR SINE MIR -183 79 16 1823 155 54 23 chr5 202709303 202709657 -375875 + L1MA9 LINE L1 5935 6299 -13 237 248 67 29 chr5 202709833 202709938 -375594 + MLT1J1 LTR MaLR 1 109 -337 552 276 0 28 chr5 202710129 202710274 -375258 + MLT1A1 LTR MaLR 160 300 -65 307 235 74 0 chr5 202710274 202710355 -375177 - MLT2B3 LTR ERVL -139 415 329 1800 190 37 3 chr5 202710362 202710688 -374844 + MLT2B3 LTR ERVL 118 454 -100 287 225 101 58 chr5 202710689 202710827 -374705 + MIR SINE MIR 65 208 -54 1800 236 37 18 chr5 202711068 202711101 -374431 - MLT1C LTR MaLR 0 467 436 1634 168 87 9 chr5 202711101 202711422 -374110 + MER7A DNA MER2_type 2 345 -1 1800 236 37 18 chr5 202711422 202711846 -373686 - MLT1C LTR MaLR -31 436 1 1122 239 98 7 chr5 202713557 202713863 -371669 + L1MC4 LINE L1 7569 7902 -140 21 0 0 0 chr5 202713903 202713924 -371608 + AT_rich Low_complexity Low_complexity 1 21 0 859 309 72 8 chr5 202713927 202714302 -371230 + L1MC4a LINE L1 5443 5841 -1967 2517 106 19 11 chr5 202714610 202714977 -370555 + L1PA15 LINE L1 5793 6162 -3 2180 92 3 14 chr5 202715674 202715967 -369565 + AluSg SINE Alu 1 290 -20 261 0 0 0 chr5 202715987 202716016 -369516 + (TG)n Simple_repeat Simple_repeat 2 30 0 301 330 0 0 chr5 202716440 202716531 -369001 - L1MC4 LINE L1 -1339 6703 6613 379 224 24 0 chr5 202716746 202716831 -368701 - LTR33A LTR ERVL 0 523 437 451 297 119 31 chr5 202716869 202716961 -368571 + L1MC4 LINE L1 801 883 -5427 1729 155 28 3 chr5 202716961 202717245 -368287 + AluSx SINE Alu 1 291 -21 451 297 119 31 chr5 202717245 202717913 -367619 + L1MC4 LINE L1 883 1670 -4640 2128 119 6 25 chr5 202717949 202718267 -367265 + AluSx SINE Alu 1 312 0 360 299 89 59 chr5 202718268 202718539 -366993 + L1MC4 LINE L1 1765 2043 -4267 1045 247 207 17 chr5 202718548 202719187 -366345 + L1MC4 LINE L1 2116 2875 -3254 492 220 158 0 chr5 202719181 202719358 -366174 - L1M4 LINE L1 -2821 3325 3121 * 191 232 101 14 chr5 202719427 202719496 -366036 - MIR SINE MIR -75 187 113 377 274 51 90 chr5 202720134 202720247 -365285 - MIR SINE MIR -36 226 125 1958 129 24 7 chr5 202720247 202720542 -364990 + AluSx SINE Alu 9 308 -4 377 274 51 90 chr5 202720542 202720662 -364870 - MIR SINE MIR -137 125 2 207 276 69 0 chr5 202721983 202722041 -363491 + L2 LINE L2 3248 3309 -4 201 326 41 51 chr5 202722327 202722425 -363107 + MIR SINE MIR 17 113 -149 22 0 0 0 chr5 202723476 202723498 -362034 + AT_rich Low_complexity Low_complexity 1 22 0 367 238 33 131 chr5 202726755 202726877 -358655 - L2 LINE L2 -3 3269 3160 3068 249 128 55 chr5 202727242 202727459 -358073 + L1MC4 LINE L1 4708 4908 -3117 2310 94 7 0 chr5 202727459 202727756 -357776 + AluSc SINE Alu 1 299 -10 3068 249 128 55 chr5 202727756 202730459 -355073 + L1MC4 LINE L1 4908 8025 0 2407 83 3 0 chr5 202731855 202732157 -353375 + AluY SINE Alu 1 303 -8 613 237 164 0 chr5 202732425 202732577 -352955 - MER58C DNA MER1_type -2 213 37 244 299 118 21 chr5 202732597 202732666 -352866 + L1MC5 LINE L1 7742 7803 -239 2138 122 7 0 chr5 202732666 202732970 -352562 - AluSx SINE Alu -4 308 3 244 299 118 21 chr5 202732970 202733130 -352402 + L1MC5 LINE L1 7803 7988 -54 2286 113 0 19 chr5 202733145 202733463 -352069 + AluSq SINE Alu 1 312 -1 2004 138 7 17 chr5 202733494 202733792 -351740 + AluSx SINE Alu 1 295 -17 292 249 120 76 chr5 202735091 202735448 -350084 + L1MC4a LINE L1 5694 6066 -1742 22 56 0 0 chr5 202735498 202735534 -349998 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr5 202736351 202736382 -349150 + GC_rich Low_complexity Low_complexity 1 31 0 1168 126 63 24 chr5 202737087 202737293 -348239 - L1MA3 LINE L1 -3 6302 6089 1179 205 205 52 chr5 202737305 202737933 -347599 - Charlie2 DNA MER1_type -83 2779 2056 690 142 133 0 chr5 202738119 202738239 -347293 + MER3 DNA MER1_type 74 209 0 362 176 44 0 chr5 202738179 202738247 -347285 - MER3 DNA MER1_type -99 110 40 * 1790 168 7 10 chr5 202738449 202738759 -346773 - AluJb SINE Alu 0 312 4 200 125 25 0 chr5 202738846 202738886 -346646 + (CA)n Simple_repeat Simple_repeat 2 42 0 1342 176 100 3 chr5 202738933 202739222 -346310 + MER33 DNA MER1_type 8 324 0 1639 171 0 60 chr5 202739385 202739559 -345973 - AluJo SINE Alu -11 301 153 2262 102 3 3 chr5 202739559 202739854 -345678 - AluSx SINE Alu -17 295 1 1639 171 0 60 chr5 202739854 202739995 -345537 - AluJo SINE Alu -159 153 5 21 0 0 0 chr5 202740001 202740022 -345510 + AT_rich Low_complexity Low_complexity 1 21 0 2186 91 0 4 chr5 202740105 202740380 -345152 - AluSq SINE Alu -39 274 1 820 145 0 58 chr5 202740385 202740523 -345009 - FLAM_C SINE Alu -3 130 1 301 281 133 21 chr5 202740955 202741339 -344193 + L1MC4a LINE L1 4036 4462 -1684 284 296 59 9 chr5 202741969 202742189 -343343 + L1MC4a LINE L1 5097 5327 -819 755 290 79 19 chr5 202742212 202742578 -342954 + L1MC4a LINE L1 5400 5787 -2021 1240 164 5 0 chr5 202742580 202742787 -342745 - MLT1C LTR MaLR 0 467 260 1653 217 78 8 chr5 202742874 202742949 -342583 + LTR2 LTR ERV1 41 109 -340 342 0 0 0 chr5 202742949 202742987 -342545 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1653 217 78 8 chr5 202742987 202743293 -342239 + LTR2 LTR ERV1 109 449 0 1533 161 4 22 chr5 202743293 202743560 -341972 - MLT1C LTR MaLR -205 262 1 339 284 101 24 chr5 202743561 202743730 -341802 + L1MC4a LINE L1 5786 5967 -1841 21 57 0 0 chr5 202743878 202743913 -341619 + AT_rich Low_complexity Low_complexity 1 35 0 514 231 116 0 chr5 202744565 202744649 -340883 - MIR SINE MIR -24 238 165 225 0 0 0 chr5 202744649 202744674 -340858 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 420 71 0 0 chr5 202744673 202744729 -340803 + (TA)n Simple_repeat Simple_repeat 1 56 0 514 231 116 0 chr5 202744674 202744791 -340741 - MIR SINE MIR -97 165 75 446 197 123 0 chr5 202745176 202745298 -340234 + MIR SINE MIR 82 218 -44 307 262 155 21 chr5 202745297 202745465 -340067 - MIR SINE MIR -58 150 18 * 421 263 81 36 chr5 202746004 202746309 -339223 - MLT1J2 LTR MaLR -6 403 75 31 0 0 0 chr5 202746549 202746580 -338952 + AT_rich Low_complexity Low_complexity 1 31 0 2148 216 110 21 chr5 202746595 202747113 -338419 - MLT1F1 LTR MaLR -3 564 1 243 0 0 0 chr5 202747533 202747560 -337972 + (TG)n Simple_repeat Simple_repeat 1 27 0 1556 167 0 45 chr5 202748513 202748800 -336732 + AluJb SINE Alu 36 309 -3 938 197 93 101 chr5 202748943 202749360 -336172 + MLT2D LTR ERVL 1 414 0 465 62 16 0 chr5 202749416 202749480 -336052 - FRAM/FAM SINE Alu -101 84 20 1200 166 114 7 chr5 202749529 202749819 -335713 + LTR54B LTR ERV1 176 496 -2 2356 92 3 7 chr5 202750746 202751052 -334480 + AluSp SINE Alu 1 305 -8 1070 190 97 17 chr5 202751096 202751333 -334199 + MER67B LTR ERV1 1 256 -405 1995 150 0 58 chr5 202751334 202751680 -333852 - Tigger3(Golem) DNA MER2_type -1 3028 2703 1693 224 22 8 chr5 202751859 202752230 -333302 - L1M3e LINE L1 -6648 382 7 880 271 88 19 chr5 202752258 202752623 -332909 - L1MA9 LINE L1 -29 7304 6915 1399 167 33 85 chr5 202752696 202753001 -332531 - AluJo SINE Alu -23 289 1 6215 186 40 22 chr5 202753003 202753260 -332272 - L1MA9 LINE L1 -407 6926 6675 2928 76 0 13 chr5 202753260 202753640 -331892 - THE1C LTR MaLR 0 375 1 6215 186 40 22 chr5 202753640 202753673 -331859 - L1MA9 LINE L1 -658 6675 6644 180 0 0 0 chr5 202753673 202753693 -331839 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1981 142 0 4 chr5 202753693 202753974 -331558 - AluJb SINE Alu -32 280 1 6215 186 40 22 chr5 202753974 202755573 -329959 - L1MA9 LINE L1 -688 6645 5002 38013 90 10 9 chr5 202755575 202761719 -323813 - L1PA6 LINE L1 -2 6152 11 2328 94 0 0 chr5 202761739 202762027 -323505 - AluSg SINE Alu -22 288 1 3990 223 45 64 chr5 202762030 202762060 -323472 - L1MA9 LINE L1 -2161 5006 4977 2096 145 0 0 chr5 202762060 202762357 -323175 - AluSx SINE Alu -15 297 1 3990 223 45 64 chr5 202762357 202763103 -322429 - L1MA9 LINE L1 -2190 4977 4269 2097 109 10 20 chr5 202763103 202763396 -322136 + AluSx SINE Alu 1 290 -22 3990 223 45 64 chr5 202763396 202764087 -321445 - L1MA9 LINE L1 -2898 4269 3566 3383 97 4 4 chr5 202764088 202764562 -320970 + L1P LINE L1 1630 2103 -4043 32157 114 12 55 chr5 202764578 202771011 -314521 + L1PA7 LINE L1 12 6152 -2 649 269 68 4 chr5 202771018 202771282 -314250 - L1MA9 LINE L1 -3594 3573 3293 726 218 16 10 chr5 202771296 202771489 -314043 - L1MA9 LINE L1 -4841 2327 2134 4809 25 5 0 chr5 202771499 202772053 -313479 - L1PA4 LINE L1 -3 6152 5596 852 104 0 0 chr5 202772075 202772224 -313308 - AluSg/x SINE Alu 0 325 177 1268 240 34 3 chr5 202772225 202772521 -313011 - L1MA9 LINE L1 -5144 2024 1720 1959 195 16 31 chr5 202773087 202773505 -312027 - L1MC2 LINE L1 -280 5875 5468 454 300 101 48 chr5 202775794 202776251 -309281 - LTR16C LTR ERVL -10 481 1 43692 32 24 2 chr5 202777678 202783694 -301838 - L1PA2 LINE L1 0 6155 1 1118 228 106 11 chr5 202784226 202784563 -300969 - L1MD2 LINE L1 -45 6143 5783 844 149 8 15 chr5 202784754 202784888 -300644 + FLAM_C SINE Alu 1 133 0 456 171 73 0 chr5 202784994 202785076 -300456 + HY4 scRNA scRNA 1 88 -5 819 223 84 15 chr5 202785090 202785292 -300240 + MER76 LTR ERV 21 236 -452 644 99 9 72 chr5 202785347 202785458 -300074 + MER83 LTR ERV1 1 104 -344 1341 148 111 138 chr5 202785467 202785872 -299660 + MER83 LTR ERV1 55 448 0 1144 251 42 22 chr5 202785887 202786242 -299290 + MER76 LTR ERV 327 688 0 1240 252 72 61 chr5 202787012 202787540 -297992 + MLT2B3 LTR ERVL 1 534 -20 342 158 0 0 chr5 202787600 202787657 -297875 + MLT2B1 LTR ERVL 464 520 0 810 157 0 0 chr5 202787752 202787873 -297659 + FLAM_A SINE Alu 14 134 -8 2304 269 66 30 chr5 202787874 202788876 -296656 + ERVL LTR ERVL 143 1200 -4454 966 222 30 0 chr5 202788858 202789056 -296476 + ERVL LTR ERVL 3212 3415 -2349 * 1423 178 23 93 chr5 202789233 202789621 -295911 + MLT1A1 LTR MaLR 4 364 -1 225 246 49 27 chr5 202789631 202789814 -295718 + L1M4 LINE L1 2779 2965 -3181 2448 253 103 38 chr5 202789840 202790784 -294748 + L1 LINE L1 2 1006 -5135 1448 159 41 10 chr5 202790806 202791096 -294436 + L1 LINE L1 3809 4107 -2103 1023 186 9 1 chr5 202791097 202791439 -294093 - MSTD LTR MaLR 0 396 3 1316 191 53 11 chr5 202791462 202791840 -293692 + L1MA10 LINE L1 2958 3351 -2795 561 161 0 0 chr5 202791841 202791934 -293598 - Tigger7 DNA MER2_type -2 2585 2493 * 946 236 6 0 chr5 202791932 202792114 -293418 - Tigger7 DNA MER2_type -520 185 3 7654 193 52 64 chr5 202792671 202792904 -292628 + L1MA10 LINE L1 3352 3586 -2748 2419 83 0 3 chr5 202792904 202793216 -292316 + AluY SINE Alu 1 311 0 7654 193 52 64 chr5 202793216 202793689 -291843 + L1MA10 LINE L1 3586 4063 -2271 4976 165 18 13 chr5 202793689 202794588 -290944 - MER4D LTR ERV1 0 903 1 7654 193 52 64 chr5 202794588 202795286 -290246 + L1MA10 LINE L1 4063 4768 -1566 600 75 0 0 chr5 202795286 202795366 -290166 - MADE1 DNA Mariner 0 80 1 7654 193 52 64 chr5 202795366 202796818 -288714 + L1MA10 LINE L1 4768 6146 -188 408 20 0 0 chr5 202796818 202796867 -288665 + (CA)n Simple_repeat Simple_repeat 2 50 0 7654 193 52 64 chr5 202796867 202797034 -288498 + L1MA10 LINE L1 6146 6313 -21 5525 196 11 2 chr5 202797102 202798340 -287192 - L1P LINE L1 -2742 3404 2156 844 329 66 46 chr5 202798369 202799083 -286449 + L1M4 LINE L1 3710 4437 -1709 2989 268 41 15 chr5 202799534 202801181 -284351 + L1M3b LINE L1 818 2184 -4166 30143 111 12 58 chr5 202801192 202807515 -278017 + L1PA7 LINE L1 12 6141 -13 2378 62 0 10 chr5 202807517 202807808 -277724 - AluY SINE Alu -23 288 1 3138 222 57 11 chr5 202807825 202808917 -276615 + L1M3b LINE L1 2167 3312 -3038 2633 178 17 14 chr5 202808917 202809491 -276041 + L1M3b LINE L1 3660 4235 -2115 5916 189 140 30 chr5 202809491 202811000 -274532 - MER52A LTR ERV1 0 1755 1 2139 190 33 17 chr5 202811000 202811078 -274454 + L1M3b LINE L1 4232 4307 -2043 2133 91 21 7 chr5 202811078 202811365 -274167 - AluSc SINE Alu -17 292 2 2139 190 33 17 chr5 202811365 202811808 -273724 + L1M3b LINE L1 4307 4761 -1589 437 256 101 27 chr5 202812446 202812665 -272867 + L1MA6 LINE L1 1718 1952 -5257 277 209 119 22 chr5 202812662 202812796 -272736 + L1MA7 LINE L1 4122 4268 -2940 * 9504 205 23 77 chr5 202812813 202813696 -271836 + L1MA6 LINE L1 1969 2898 -4464 1592 115 9 0 chr5 202813696 202813914 -271618 - AluSc SINE Alu -8 301 82 9504 205 23 77 chr5 202813914 202814411 -271121 + L1MA6 LINE L1 2898 3420 -3942 231 36 0 0 chr5 202814411 202814439 -271093 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 9504 205 23 77 chr5 202814439 202815224 -270308 + L1MA6 LINE L1 3420 4246 -3116 2105 121 24 3 chr5 202815224 202815522 -270010 + AluSg SINE Alu 1 304 -6 9504 205 23 77 chr5 202815522 202815947 -269585 + L1MA6 LINE L1 4246 4692 -2670 1399 140 35 94 chr5 202815947 202816233 -269299 + AluSx SINE Alu 5 273 -39 9504 205 23 77 chr5 202816233 202818290 -267242 + L1MA6 LINE L1 4692 6388 -974 2323 94 17 0 chr5 202818290 202818589 -266943 - AluSx SINE Alu -8 304 1 9504 205 23 77 chr5 202818589 202819197 -266335 + L1MA6 LINE L1 6388 7027 -335 2334 126 64 17 chr5 202819197 202819615 -265917 + L1MA6 LINE L1 5853 6294 -6 1808 154 64 6 chr5 202819622 202819966 -265566 + L1MA6 LINE L1 6999 7362 0 4073 181 27 6 chr5 202819974 202820856 -264676 + L1MA7 LINE L1 5540 6440 -768 279 0 0 0 chr5 202821147 202821178 -264354 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3942 167 56 14 chr5 202821178 202822057 -263475 + L1MA7 LINE L1 6432 7347 -6 564 322 55 9 chr5 202822104 202822539 -262993 + L1M4 LINE L1 4540 4994 -1152 220 222 0 37 chr5 202823231 202823285 -262247 + C-rich Low_complexity Low_complexity 6 57 0 207 0 0 0 chr5 202824053 202824076 -261456 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 945 243 36 20 chr5 202826153 202826458 -259074 + L1MD2 LINE L1 3609 3918 -2228 1475 231 32 30 chr5 202826473 202826914 -258618 + L1MD2 LINE L1 5349 5790 -376 2361 186 8 13 chr5 202827150 202827618 -257914 - L1MC1 LINE L1 -2 6331 5866 1210 220 49 120 chr5 202827929 202828142 -257390 + L1MD2 LINE L1 5794 6021 -338 1764 127 69 33 chr5 202828142 202828504 -257028 - THE1C LTR MaLR 0 375 1 1210 220 49 120 chr5 202828504 202828559 -256973 + L1MD2 LINE L1 6021 6078 -281 1771 164 0 20 chr5 202828559 202828851 -256681 - AluJo SINE Alu -20 292 7 1210 220 49 120 chr5 202828851 202828935 -256597 + L1MD2 LINE L1 6078 6166 -193 198 0 0 0 chr5 202828935 202828957 -256575 + (CA)n Simple_repeat Simple_repeat 1 22 0 1210 220 49 120 chr5 202828957 202829193 -256339 + L1MD2 LINE L1 6166 6342 -17 270 81 0 0 chr5 202830067 202830104 -255428 + (TG)n Simple_repeat Simple_repeat 1 37 0 236 226 9 0 chr5 202830183 202830249 -255283 + A-rich Low_complexity Low_complexity 1 116 0 1873 136 14 3 chr5 202830382 202830669 -254863 + AluJb SINE Alu 1 290 -22 2151 93 0 23 chr5 202830884 202831205 -254327 - AluSx SINE Alu 0 314 1 2634 162 20 2 chr5 202831211 202831712 -253820 - L1MA8 LINE L1 0 7007 6498 1351 101 0 0 chr5 202831804 202831983 -253549 - AluSp SINE Alu -2 311 133 926 55 0 0 chr5 202831983 202832093 -253439 + AluSq/x SINE Alu 21 130 -183 9238 172 24 3 chr5 202832094 202834298 -251234 - L1MA8 LINE L1 -514 6493 4243 3276 291 30 28 chr5 202834280 202835729 -249803 - L1MA8 LINE L1 -5410 1453 3 * 3775 166 25 14 chr5 202835739 202836574 -248958 - L1M2 LINE L1 -3967 3242 2399 2254 228 101 31 chr5 202836647 202837367 -248165 - L1M2 LINE L1 -6438 771 1 4112 255 48 17 chr5 202837383 202839160 -246372 - L1M2 LINE L1 -4288 2819 992 * 7874 192 33 2 chr5 202839154 202841208 -244324 + L1MA7 LINE L1 3699 5813 -478 2251 93 0 28 chr5 202841263 202841585 -243947 + AluSq SINE Alu 1 313 0 248 228 35 0 chr5 202842623 202842737 -242795 + CT-rich Low_complexity Low_complexity 3 120 0 2923 141 234 40 chr5 202843916 202845078 -240454 - pTR5 LTR ERV1 0 2438 738 35 0 0 0 chr5 202845158 202845193 -240339 + AT_rich Low_complexity Low_complexity 1 35 0 1357 161 21 8 chr5 202845994 202846237 -239295 + L1MA7 LINE L1 5812 6057 -234 10446 206 30 68 chr5 202846238 202847858 -237674 + L1MA9 LINE L1 2298 3978 -2334 1821 213 31 0 chr5 202847858 202848210 -237322 + MLT1A1 LTR MaLR 1 363 -2 10446 206 30 68 chr5 202848210 202848691 -236841 + L1MA9 LINE L1 3978 4476 -1836 687 146 127 0 chr5 202848691 202848801 -236731 - FLAM_C SINE Alu -7 126 3 10446 206 30 68 chr5 202848801 202848880 -236652 + L1MA9 LINE L1 4476 4556 -1756 1024 149 0 53 chr5 202848880 202849096 -236436 + AluJo SINE Alu 105 310 0 10446 206 30 68 chr5 202849096 202850318 -235214 + L1MA9 LINE L1 4556 5748 -564 230 344 54 11 chr5 202850327 202850420 -235112 + L1M3c LINE L1 7 103 -6038 1020 209 88 15 chr5 202851000 202851263 -234269 + L1MA9 LINE L1 5993 6274 -38 3608 149 47 2 chr5 202851504 202852059 -233473 - LTR19B LTR ERV1 0 580 1 1082 160 25 70 chr5 202852060 202852304 -233228 - LTR19B-int LTR ERV1 -1 5585 5353 * 3656 121 2 9 chr5 202852292 202852830 -232702 - LTR19B-int LTR ERV1 -335 5251 4718 * 4394 85 5 0 chr5 202852825 202853404 -232128 - LTR19B-int LTR ERV1 -1086 4500 3919 2466 79 0 19 chr5 202853405 202853723 -231809 - AluSp SINE Alu -1 312 1 600 113 0 0 chr5 202853733 202853813 -231719 - AluY SINE Alu -16 295 216 24 0 0 0 chr5 202903964 202903988 -181544 + GC_rich Low_complexity Low_complexity 1 24 0 210 188 0 42 chr5 202904471 202904519 -181013 + (CGGGG)n Simple_repeat Simple_repeat 5 50 0 303 258 0 0 chr5 202905502 202905568 -179964 + L2 LINE L2 3184 3249 -23 268 271 51 51 chr5 202905585 202905703 -179829 - MIR SINE MIR -40 222 105 1966 107 0 30 chr5 202906174 202906474 -179058 - AluSx SINE Alu -19 293 3 1859 108 27 30 chr5 202908109 202908405 -177127 + AluSx SINE Alu 1 295 -17 1829 119 17 7 chr5 202909519 202909813 -175719 - AluSx SINE Alu -7 305 9 2091 92 31 0 chr5 202909828 202910121 -175411 - AluSp SINE Alu -11 302 1 604 148 56 19 chr5 202910153 202910261 -175271 + FLAM_C SINE Alu 14 125 -18 1308 79 0 0 chr5 202910424 202910589 -174943 - AluSx SINE Alu -147 165 1 2202 96 7 0 chr5 202910601 202910894 -174638 - AluY SINE Alu -16 295 1 1782 146 24 7 chr5 202910911 202911198 -174334 - AluSq SINE Alu -21 292 1 2150 101 20 0 chr5 202912139 202912445 -173087 - AluSx SINE Alu 0 312 1 798 241 41 5 chr5 202912967 202913162 -172370 - MER20 DNA MER1_type -1 218 17 602 197 16 33 chr5 202913728 202913850 -171682 + FRAM SINE Alu 34 153 -23 226 214 0 0 chr5 202917564 202917606 -167926 + GA-rich Low_complexity Low_complexity 2 43 0 462 313 61 74 chr5 202918513 202918839 -166693 + L2 LINE L2 2951 3272 0 528 101 9 55 chr5 202918939 202919048 -166484 - MER58 DNA MER1_type -11 2409 2306 2278 82 0 19 chr5 202920441 202920756 -164776 - AluSc SINE Alu 0 309 1 238 222 0 0 chr5 202921692 202921737 -163795 + L2 LINE L2 3212 3256 -16 2184 109 3 0 chr5 202922009 202922313 -163219 - AluSx SINE Alu -5 307 3 2243 104 7 3 chr5 202922381 202922690 -162842 - AluSx SINE Alu -2 310 1 1323 69 0 12 chr5 202922715 202922888 -162644 - AluY SINE Alu -12 299 129 1362 167 61 19 chr5 202922916 202923180 -162352 + AluJo SINE Alu 25 299 -13 2290 78 3 3 chr5 202923319 202923626 -161906 + AluY SINE Alu 1 307 -4 2241 109 6 3 chr5 202923795 202924106 -161426 + AluSp SINE Alu 1 312 -1 268 295 53 11 chr5 202924464 202924559 -160973 + MER5B DNA MER1_type 80 178 0 2137 123 0 0 chr5 202924562 202924864 -160668 + AluSx SINE Alu 1 302 -10 516 301 21 16 chr5 202925338 202925524 -160008 + MIR SINE MIR 74 260 -2 215 167 0 42 chr5 202926476 202926548 -158984 + CT-rich Low_complexity Low_complexity 1 69 0 694 0 0 0 chr5 202928199 202928273 -157259 + tRNA-Val-GTG tRNA tRNA 1 74 -2 667 0 0 0 chr5 202928615 202928688 -156844 + tRNA-Lys-AAG tRNA tRNA 1 73 -3 230 328 0 0 chr5 202929157 202929224 -156308 + tRNA-Glu-GAG tRNA tRNA 6 72 -3 542 172 0 40 chr5 202929374 202929473 -156059 + AluJ/FLAM SINE Alu 8 102 -210 2194 92 13 0 chr5 202929497 202929802 -155730 - AluSc SINE Alu 0 309 1 199 275 121 0 chr5 202931014 202931105 -154427 - L2 LINE L2 -1331 1983 1882 946 201 82 50 chr5 202931222 202931661 -153871 + Zaphod DNA AcHobo 532 984 -3047 243 150 0 0 chr5 202931660 202931700 -153832 + Zaphod DNA AcHobo 3590 3629 -402 * 2286 48 16 19 chr5 202931807 202932119 -153413 - AluY SINE Alu 0 311 1 674 14 0 0 chr5 202932324 202932397 -153135 + tRNA-Val-GTT tRNA tRNA 1 73 -3 197 171 0 0 chr5 202932841 202932876 -152656 - MIR SINE MIR -123 139 105 884 157 235 55 chr5 202933458 202933552 -151980 + AluJo SINE Alu 1 77 -225 191 35 0 35 chr5 202933552 202933581 -151951 + (CCCCCG)n Simple_repeat Simple_repeat 3 30 0 884 157 235 55 chr5 202933581 202933741 -151791 + AluJo SINE Alu 77 301 -1 1969 90 10 17 chr5 202934384 202934672 -150860 + AluSq SINE Alu 1 286 -27 200 59 78 0 chr5 202934764 202934815 -150717 + (TA)n Simple_repeat Simple_repeat 1 55 0 398 325 79 65 chr5 202934815 202935413 -150119 - L1MC5 LINE L1 -34 7927 4193 240 254 28 14 chr5 202935431 202935502 -150030 - AluJ/FLAM SINE Alu -229 73 2 326 320 46 57 chr5 202935524 202935699 -149833 - L1MC4 LINE L1 -974 7068 6896 1882 109 18 0 chr5 202935935 202936229 -149303 - AluSg SINE Alu 0 299 1 180 0 0 0 chr5 202936229 202936249 -149283 + (T)n Simple_repeat Simple_repeat 1 20 0 1341 187 0 109 chr5 202936324 202936645 -148887 + AluJb SINE Alu 1 286 -16 278 319 17 0 chr5 202936647 202936763 -148769 - L1MC5 LINE L1 -71 7890 7773 488 197 51 73 chr5 202936933 202937070 -148462 - FLAM_A SINE Alu 0 142 9 236 307 27 0 chr5 202937072 202937147 -148385 - MIR SINE MIR -36 226 150 358 343 56 27 chr5 202937175 202937513 -148019 - L2 LINE L2 -67 3246 2899 790 276 30 33 chr5 202939292 202939658 -145874 + L1MC4a LINE L1 5500 5864 -1944 2171 79 3 26 chr5 202939658 202939962 -145570 + AluSp SINE Alu 1 297 -16 1686 163 30 3 chr5 202940036 202940331 -145201 + AluSx SINE Alu 1 303 -9 1986 83 14 7 chr5 202940331 202940608 -144924 + AluSx SINE Alu 1 279 -33 535 138 181 35 chr5 202940747 202940863 -144669 - FLAM_C SINE Alu 0 133 1 2431 38 0 16 chr5 202940869 202941182 -144350 - AluY SINE Alu -3 308 1 1113 108 0 0 chr5 202941182 202941340 -144192 - AluSg/x SINE Alu -16 294 137 1812 91 113 7 chr5 202941340 202941615 -143917 - AluSg1 SINE Alu -5 304 1 2308 48 10 26 chr5 202941623 202941932 -143600 - AluY SINE Alu -7 304 1 2402 164 65 82 chr5 202941958 202942594 -142938 + L1MB3 LINE L1 5555 6179 -4 671 13 0 0 chr5 202942764 202942840 -142692 - tRNA-Lys-AAG tRNA tRNA 0 76 1 1995 97 0 0 chr5 202943192 202943459 -142073 - AluSg SINE Alu -43 267 1 648 14 0 0 chr5 202943647 202943719 -141813 - tRNA-Ala-GCG tRNA tRNA -3 72 1 304 315 140 25 chr5 202944201 202944765 -140767 - L2 LINE L2 -5 3267 1771 252 0 0 0 chr5 202944798 202944826 -140706 + (TG)n Simple_repeat Simple_repeat 1 28 0 510 218 98 17 chr5 202947146 202947178 -138354 - MER46C DNA MER2_type -65 273 245 450 281 39 0 chr5 202947178 202947306 -138226 + MER94 DNA DNA 1 133 -1 510 218 98 17 chr5 202947306 202947447 -138085 - MER46C DNA MER2_type -93 245 86 2324 59 10 3 chr5 202947717 202948020 -137512 + AluY SINE Alu 1 305 -6 2257 101 3 0 chr5 202948101 202948408 -137124 + AluSp SINE Alu 1 308 -5 1046 148 148 95 chr5 202948823 202949106 -136426 - AluJo SINE Alu 0 312 15 1052 147 21 31 chr5 202949257 202949448 -136084 + MER20 DNA MER1_type 31 219 0 265 347 20 0 chr5 202949542 202949640 -135892 + MIR SINE MIR 112 211 -51 367 262 119 0 chr5 202950956 202951082 -134450 + MER112 DNA MER1_type 88 228 -32 434 287 125 33 chr5 202952901 202953281 -132251 + L2 LINE L2 2701 3101 -212 1543 167 45 7 chr5 202953414 202953702 -131830 - AluJo SINE Alu -13 299 1 658 216 81 58 chr5 202953707 202953847 -131685 - L1MC5 LINE L1 -36 7925 7790 1465 175 10 49 chr5 202953847 202954155 -131377 - AluSx SINE Alu -16 296 1 2225 86 0 25 chr5 202954164 202954479 -131053 - AluY SINE Alu -4 307 1 658 216 81 58 chr5 202954479 202954638 -130894 - L1MC5 LINE L1 -178 7783 7609 796 153 0 15 chr5 202956189 202956320 -129212 - FLAM_C SINE Alu -1 132 4 637 27 0 0 chr5 202958821 202958894 -126638 + tRNA-Thr-ACA tRNA tRNA 1 73 -3 648 0 0 0 chr5 202961655 202961727 -123805 + tRNA-Pro-CCA tRNA tRNA 1 72 -3 686 0 0 0 chr5 202962094 202962167 -123365 + tRNA-Val-GTT tRNA tRNA 1 73 -3 2250 81 7 3 chr5 202962180 202962490 -123042 - AluSp SINE Alu -2 311 1 473 0 0 0 chr5 202962801 202962855 -122677 - tRNA-Leu-CTT tRNA tRNA -3 82 29 226 197 0 30 chr5 202963236 202963302 -122230 + A-rich Low_complexity Low_complexity 2 65 0 1183 148 86 0 chr5 202963304 202963513 -122019 + AluJb SINE Alu 85 311 -1 870 249 38 103 chr5 202963550 202964092 -121440 + L1ME3 LINE L1 5657 6154 -10 1355 235 158 63 chr5 202964121 202964691 -120841 - MLT1E3 LTR MaLR 0 624 1 24 0 0 0 chr5 202965213 202965237 -120295 + AT_rich Low_complexity Low_complexity 1 24 0 513 191 0 0 chr5 202965270 202965364 -120168 - FLAM_A SINE Alu -48 94 1 1572 166 61 0 chr5 202965402 202965680 -119852 - AluJb SINE Alu -17 295 1 2249 59 0 7 chr5 202965684 202966028 -119504 - AluY SINE Alu 0 311 1 1830 67 27 109 chr5 202966845 202967175 -118357 - AluYb8 SINE Alu -15 303 1 351 362 13 0 chr5 202967187 202967339 -118193 - L1M1 LINE L1 -487 5818 5665 1295 201 11 25 chr5 202967621 202967899 -117633 - AluJo SINE Alu 0 312 39 679 190 0 36 chr5 202967995 202968132 -117400 + FLAM_C SINE Alu 2 133 -10 396 294 75 0 chr5 202968625 202968771 -116761 + Charlie4 DNA MER1_type 36 192 -1769 626 205 0 0 chr5 202968773 202968900 -116632 + AluJb SINE Alu 180 306 -6 357 216 0 72 chr5 202968900 202968997 -116535 + Charlie4 DNA MER1_type 185 274 -1687 1581 174 0 16 chr5 202969006 202969311 -116221 + AluJo SINE Alu 12 311 -1 300 137 98 0 chr5 202969312 202969363 -116169 + Charlie4 DNA MER1_type 1883 1938 -23 2266 99 0 3 chr5 202969390 202969692 -115840 + AluSq SINE Alu 1 301 -12 694 239 43 24 chr5 202970164 202970373 -115159 + MLT1A2 LTR MaLR 159 371 -3 421 225 34 0 chr5 202970723 202970812 -114720 + Tigger3(Golem) DNA MER2_type 3 94 -2935 700 162 117 7 chr5 202970915 202971069 -114463 - MER58 DNA MER1_type -166 175 5 1903 72 92 4 chr5 202971141 202971441 -114091 - AluSx SINE Alu 0 323 1 2432 38 0 0 chr5 202971764 202972091 -113441 + AluY SINE Alu 1 327 0 1539 46 73 9 chr5 202972091 202972310 -113222 - MER11A LTR ERVK -1032 234 2 833 143 0 15 chr5 202972323 202972456 -113076 - FLAM_C SINE Alu -1 132 2 492 324 111 0 chr5 202972469 202972713 -112819 - MER90 LTR ERV1 -294 281 11 1141 89 0 6 chr5 202972962 202973120 -112412 - AluSg/x SINE Alu -7 305 149 595 176 0 42 chr5 202973127 202973269 -112263 - L1MA9 LINE L1 -194 6118 5983 391 269 27 13 chr5 202973273 202973422 -112110 + L1M4 LINE L1 3889 4039 -2107 2550 131 12 10 chr5 202973423 202973834 -111698 + MER41B LTR ERV1 1 412 -223 542 261 53 49 chr5 202974177 202974403 -111129 - L1ME LINE L1 -617 5547 5321 1480 196 10 13 chr5 202974469 202974775 -110757 + AluJb SINE Alu 1 305 -7 616 275 8 40 chr5 202974775 202975011 -110521 - L1ME LINE L1 -1088 5058 4829 859 158 0 0 chr5 202975057 202975190 -110342 + FLAM_C SINE Alu 1 133 0 309 192 0 115 chr5 202975211 202975319 -110213 + AluJ/FRAM SINE Alu 214 312 0 776 184 14 60 chr5 202975324 202975392 -110140 - L1M4 LINE L1 -385 5799 5729 1747 167 7 3 chr5 202975392 202975691 -109841 - AluJo SINE Alu -12 300 1 776 184 14 60 chr5 202975691 202975840 -109692 - L1M4 LINE L1 -455 5729 5592 686 298 24 20 chr5 202975883 202976131 -109401 + L1ME1 LINE L1 5913 6161 -5 189 365 14 0 chr5 202976871 202976945 -108587 + MIR SINE MIR 125 199 -63 674 14 0 0 chr5 202977546 202977619 -107913 - tRNA-Val-GTT tRNA tRNA -3 73 1 420 272 38 72 chr5 202977833 202978068 -107464 - L1M4 LINE L1 -617 5547 5321 180 111 0 0 chr5 202978163 202978190 -107342 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 733 183 0 36 chr5 202978195 202978332 -107200 + FLAM_C SINE Alu 2 133 0 2249 262 66 15 chr5 202978379 202979182 -106350 - L1MD2 LINE L1 -13 6346 5474 531 231 9 0 chr5 202979244 202979352 -106180 - FLAM_A SINE Alu -33 109 1 739 199 22 0 chr5 202979355 202979536 -105996 - L1MD2 LINE L1 -762 5480 5296 4267 188 26 10 chr5 202979541 202980375 -105157 - L1MB4 LINE L1 -6 6174 5319 2115 120 0 0 chr5 202980375 202980675 -104857 - AluSx SINE Alu -6 306 7 4267 188 26 10 chr5 202980675 202980823 -104709 - L1MB4 LINE L1 -861 5319 5175 443 104 39 26 chr5 202980875 202980952 -104580 - AluS SINE Alu -234 79 2 306 265 0 10 chr5 202980957 202981055 -104477 - L1MB4 LINE L1 -2188 3958 3862 296 226 35 35 chr5 202981031 202981146 -104386 - L1M4 LINE L1 -813 5333 5219 * 2003 130 0 0 chr5 202981156 202981455 -104077 - AluSx SINE Alu -2 310 12 958 237 95 6 chr5 202981465 202981781 -103751 + L1M4 LINE L1 4848 5191 -955 360 0 0 0 chr5 202981920 202981960 -103572 + (A)n Simple_repeat Simple_repeat 1 40 0 2420 50 3 0 chr5 202981978 202982279 -103253 - AluY SINE Alu -9 302 1 305 146 0 0 chr5 202982706 202982754 -102778 + tRNA-Leu-CTT tRNA tRNA 35 82 -3 674 14 0 0 chr5 202983091 202983164 -102368 - tRNA-Val-GTT tRNA tRNA -3 73 1 843 176 7 0 chr5 202983296 202983438 -102094 + FRAM SINE Alu 27 169 -7 469 257 33 55 chr5 202983751 202984058 -101474 - L1MC/D LINE L1 -617 5547 5321 1437 226 0 11 chr5 202984120 202984407 -101125 + AluJo SINE Alu 1 284 -18 378 0 0 0 chr5 202984407 202984449 -101083 + (CA)n Simple_repeat Simple_repeat 2 43 0 923 172 13 79 chr5 202984457 202984684 -100848 - MLT1B LTR MaLR -171 219 8 465 281 59 7 chr5 202984919 202985072 -100460 + MIR3 SINE MIR 33 193 -15 203 424 0 0 chr5 202986091 202986261 -99271 + (CCCCAG)n Simple_repeat Simple_repeat 6 175 0 247 408 0 0 chr5 202986507 202986676 -98856 + (CCCCAG)n Simple_repeat Simple_repeat 6 174 0 371 206 182 7 chr5 202987679 202987824 -97708 - MIR SINE MIR -62 146 6 903 212 104 91 chr5 202988210 202988507 -97025 - AluJo SINE Alu 0 302 2 1715 164 17 20 chr5 202988791 202989121 -96411 - AluJb SINE Alu 0 312 1 188 401 26 33 chr5 202989430 202989582 -95950 + L3 LINE CR1 1425 1575 -2 291 255 59 20 chr5 202990054 202990156 -95376 + MIR SINE MIR 102 207 -55 1537 169 57 43 chr5 202991057 202991358 -94174 + AluJb SINE Alu 1 305 -7 453 50 0 0 chr5 202991365 202991425 -94107 + (GAAA)n Simple_repeat Simple_repeat 4 63 0 2485 47 0 7 chr5 202992859 202993158 -92374 - AluY SINE Alu -14 297 1 1557 176 47 17 chr5 202993765 202994061 -91471 - AluSx SINE Alu -7 305 1 615 243 12 35 chr5 202994482 202994651 -90881 - MLT1F1 LTR MaLR 0 567 403 351 277 13 65 chr5 202994674 202994829 -90703 - MLT1F1 LTR MaLR -327 240 94 249 280 140 70 chr5 202995169 202995369 -90163 + MIR SINE MIR 17 230 -32 1276 153 15 0 chr5 202995464 202995660 -89872 - AluJo SINE Alu -11 301 103 351 279 153 36 chr5 202996083 202996482 -89050 + L2 LINE L2 2704 3172 -141 1541 172 38 14 chr5 202996482 202996772 -88760 - AluJo SINE Alu -15 297 1 351 279 153 36 chr5 202996772 202996863 -88669 + L2 LINE L2 3172 3251 -62 252 232 0 0 chr5 202997548 202997604 -87928 + CT-rich Low_complexity Low_complexity 1 56 0 583 313 129 44 chr5 202997926 202998898 -86634 + L2 LINE L2 2238 3311 -2 1721 151 169 20 chr5 203000089 203000439 -85093 - MER4A LTR ERV1 -2 662 261 474 146 0 12 chr5 203000439 203000521 -85011 - MER4A LTR ERV1 -566 98 18 11260 113 54 13 chr5 203000521 203001149 -84383 - MER4A-int LTR ERV1 -27 6571 5970 354 45 0 0 chr5 203001149 203001193 -84339 + (TAA)n Simple_repeat Simple_repeat 3 46 0 2120 132 7 0 chr5 203001193 203001488 -84044 - AluSx SINE Alu -15 297 1 11260 113 54 13 chr5 203001488 203002729 -82803 - MER4A-int LTR ERV1 -627 5971 4625 600 214 68 25 chr5 203002742 203002935 -82597 - MER4A-int LTR ERV1 -4291 2040 1266 2471 97 0 0 chr5 203002948 203003256 -82276 - AluSg SINE Alu -2 308 1 242 54 0 27 chr5 203003310 203003347 -82185 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2430 117 98 72 chr5 203003430 203004002 -81530 - MER4A-int LTR ERV1 -5912 686 1 1516 126 16 95 chr5 203004006 203004323 -81209 - MER4A LTR ERV1 -1 663 372 646 121 0 10 chr5 203004363 203004462 -81070 - MER4A LTR ERV1 -566 98 1 1437 181 43 7 chr5 203005389 203005692 -79840 + L1MA7 LINE L1 5840 6153 -138 868 283 27 38 chr5 203005753 203006120 -79412 + L1M4 LINE L1 3494 3856 -2290 1884 204 36 17 chr5 203006151 203006671 -78861 - MER74A LTR ERVL -28 530 1 350 298 30 0 chr5 203006671 203006802 -78730 + L1M4 LINE L1 3853 3987 -2159 639 295 109 3 chr5 203006912 203007241 -78291 + L1M4 LINE L1 4461 4824 -1322 235 143 89 0 chr5 203007241 203007297 -78235 + LTR54 LTR ERV1 402 462 -48 286 237 31 93 chr5 203008199 203008296 -77236 - MIR SINE MIR -141 121 31 187 158 26 0 chr5 203008309 203008347 -77185 - L2 LINE L2 -164 3149 3111 22 35 0 0 chr5 203008369 203008398 -77134 + AT_rich Low_complexity Low_complexity 1 29 0 1042 310 52 22 chr5 203009303 203009761 -75771 - L1MEc LINE L1 -3162 3378 2890 2451 71 3 0 chr5 203009761 203010057 -75475 - AluY SINE Alu -14 297 1 1042 310 52 22 chr5 203010057 203010317 -75215 - L1MEc LINE L1 -3650 2890 2639 25 0 0 0 chr5 203010320 203010345 -75187 + AT_rich Low_complexity Low_complexity 1 25 0 226 100 0 0 chr5 203010425 203010465 -75067 - L1MEc LINE L1 -3965 2575 2536 443 158 0 0 chr5 203010476 203010552 -74980 - MLT1B LTR MaLR 0 390 315 * 836 180 24 6 chr5 203010544 203010711 -74821 - MLT1B LTR MaLR -220 170 1 282 227 80 0 chr5 203010716 203010804 -74728 - L1MEc LINE L1 -4151 2570 2476 2026 139 7 14 chr5 203010838 203011133 -74399 + AluSx SINE Alu 1 293 -19 716 313 82 87 chr5 203011438 203011744 -73788 - L1MEc LINE L1 -670 2231 1925 261 0 0 0 chr5 203011744 203011773 -73759 + (TG)n Simple_repeat Simple_repeat 2 30 0 716 313 82 87 chr5 203011773 203011804 -73728 - L1MEc LINE L1 -976 1925 1895 216 0 0 0 chr5 203011804 203011828 -73704 + (TG)n Simple_repeat Simple_repeat 2 25 0 716 313 82 87 chr5 203011828 203012050 -73482 - L1MEc LINE L1 -1006 1895 1673 1980 146 0 7 chr5 203012050 203012352 -73180 - AluJo SINE Alu 0 312 13 716 313 82 87 chr5 203012352 203012871 -72661 - L1MEc LINE L1 -1228 1673 908 1624 148 10 61 chr5 203013516 203013826 -71706 + AluJo SINE Alu 6 299 -13 347 316 78 22 chr5 203013854 203014123 -71409 - L1MC4a LINE L1 -1765 6043 5760 443 299 9 63 chr5 203014156 203014377 -71155 - L1MC5 LINE L1 -53 7908 7700 1075 168 0 17 chr5 203014526 203014699 -70833 - AluJb SINE Alu -19 293 124 185 277 43 0 chr5 203015979 203016026 -69506 + L2 LINE L2 3137 3185 -87 920 158 30 0 chr5 203017633 203017766 -67766 - AluJo/FRAM SINE Alu -43 269 133 1662 170 7 17 chr5 203017767 203018061 -67471 - AluJo SINE Alu -9 303 13 475 292 156 31 chr5 203018082 203018797 -66735 - L2 LINE L2 -1 3312 2422 261 0 0 0 chr5 203018797 203018826 -66706 + (TG)n Simple_repeat Simple_repeat 1 29 0 475 292 156 31 chr5 203018826 203019116 -66416 - L2 LINE L2 -891 2422 2170 361 340 137 12 chr5 203019759 203020088 -65444 - L2 LINE L2 -1 3312 2943 348 249 0 0 chr5 203020179 203020344 -65188 + (TG)n Simple_repeat Simple_repeat 1 165 0 650 201 4 0 chr5 203020356 203020605 -64927 + (TG)n Simple_repeat Simple_repeat 1 250 0 1132 295 38 8 chr5 203020605 203020971 -64561 - L2 LINE L2 -504 2810 2434 2500 81 3 0 chr5 203021007 203021314 -64218 - AluSp SINE Alu -5 308 1 238 283 11 43 chr5 203022642 203022734 -62798 + MIR SINE MIR 30 118 -90 386 195 35 0 chr5 203022735 203022822 -62710 - L1MC4a LINE L1 -388 5776 5687 22 35 0 0 chr5 203022975 203023004 -62528 + AT_rich Low_complexity Low_complexity 1 29 0 484 118 32 21 chr5 203023333 203023426 -62106 + MER4A LTR ERV1 1 94 -570 1719 141 6 30 chr5 203023429 203023783 -61749 + MER4A LTR ERV1 261 664 0 255 304 0 0 chr5 203023784 203023853 -61679 + L2 LINE L2 3201 3269 -3 376 133 93 0 chr5 203024047 203024122 -61410 - LTR50 LTR ERVL 0 795 714 621 141 0 0 chr5 203024123 203024215 -61317 + AluJ/FLAM SINE Alu 2 93 -219 834 150 13 26 chr5 203024224 203024377 -61155 + FRAM SINE Alu 22 172 -4 282 252 201 7 chr5 203024763 203024902 -60630 - LTR50 LTR ERVL -508 287 122 1431 290 43 6 chr5 203025453 203025919 -59613 - ERVL LTR ERVL -1144 4620 4138 452 342 34 59 chr5 203025939 203026137 -59395 - ERVL LTR ERVL -3009 2755 2567 2146 119 0 13 chr5 203026137 203026439 -59093 + AluSx SINE Alu 1 298 -14 452 342 34 59 chr5 203026439 203026562 -58970 - ERVL LTR ERVL -3197 2567 2442 24 53 0 0 chr5 203026576 203026614 -58918 + AT_rich Low_complexity Low_complexity 1 38 0 499 274 48 0 chr5 203026741 203026909 -58623 - MER110 LTR ERV1 -19 472 297 361 179 0 0 chr5 203026972 203027039 -58493 + Alu SINE Alu 236 302 0 938 195 0 0 chr5 203027089 203027248 -58284 - FRAM SINE Alu -18 158 1 316 111 0 0 chr5 203027481 203027526 -58006 + tRNA-Val-GTG tRNA tRNA 28 72 -4 427 200 53 0 chr5 203027797 203027892 -57640 - MIR3 SINE MIR -32 176 77 1059 150 16 10 chr5 203028180 203028373 -57159 + MLT1B LTR MaLR 9 202 -188 762 274 12 8 chr5 203029122 203029367 -56165 - L1ME1 LINE L1 -5 6161 5916 1006 176 11 0 chr5 203029426 203029613 -55919 + L1M4 LINE L1 5592 5780 -404 878 241 67 64 chr5 203029616 203029718 -55814 - LTR19C LTR ERV1 0 779 679 2322 96 23 0 chr5 203029718 203030020 -55512 - AluSg SINE Alu -1 309 1 878 241 67 64 chr5 203030020 203030292 -55240 - LTR19C LTR ERV1 -100 679 223 1024 199 11 71 chr5 203033644 203033910 -51622 - LTR9 LTR ERV1 -362 250 1 1097 191 10 0 chr5 203033929 203034128 -51404 - AluJo SINE Alu -1 311 111 256 279 29 52 chr5 203034361 203034497 -51035 - L1M4 LINE L1 -6333 209 77 525 276 40 65 chr5 203034790 203035113 -50419 - LTR37B LTR ERV1 -39 429 115 500 143 44 0 chr5 203035129 203035220 -50312 + MER5A DNA MER1_type 32 126 -63 511 126 11 0 chr5 203035229 203035316 -50216 - AluJb SINE Alu -6 306 219 711 175 0 35 chr5 203035319 203035462 -50070 - AluJb SINE Alu -173 139 2 1715 142 4 8 chr5 203035492 203035753 -49779 + AluJb SINE Alu 1 260 -52 1191 241 75 28 chr5 203035770 203036236 -49296 - MER92B LTR ERV1 -68 568 70 3290 144 45 14 chr5 203036236 203036812 -48720 - L1PA16 LINE L1 0 6166 5573 1191 241 75 28 chr5 203036812 203036886 -48646 - MER92B LTR ERV1 -566 70 1 410 195 25 51 chr5 203036888 203037006 -48526 - L1ME1 LINE L1 -388 5782 5668 756 245 40 75 chr5 203037076 203037405 -48127 + LTR16A LTR ERVL 87 403 -47 1466 179 21 65 chr5 203037405 203037730 -47802 + AluJb SINE Alu 1 311 -1 756 245 40 75 chr5 203037730 203037771 -47761 + LTR16A LTR ERVL 403 444 -6 190 311 57 25 chr5 203038134 203038256 -47276 + MIR SINE MIR 116 241 -21 350 251 181 51 chr5 203038498 203038713 -46819 + MIR SINE MIR 5 247 -15 1636 268 48 15 chr5 203038913 203039451 -46081 + MER90 LTR ERV1 11 566 -9 443 182 232 0 chr5 203039599 203039698 -45834 + FLAM_A SINE Alu 4 125 -8 277 258 34 11 chr5 203040028 203040117 -45415 - L2 LINE L2 -56 3257 3167 2147 128 7 0 chr5 203040158 203040454 -45078 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr5 203040552 203040577 -44955 + AT_rich Low_complexity Low_complexity 1 25 0 315 223 158 43 chr5 203040578 203040717 -44815 + L1M2 LINE L1 5266 5420 -2388 922 219 102 62 chr5 203041253 203041577 -43955 + MER58B DNA MER1_type 5 341 0 237 241 19 0 chr5 203041789 203041843 -43689 - Tigger3(Golem) DNA MER2_type -1 3028 2974 597 232 29 0 chr5 203041903 203042041 -43491 - Tigger3(Golem) DNA MER2_type -2885 144 3 589 243 58 24 chr5 203042390 203042596 -42936 - MLT1A2 LTR MaLR -3 371 159 645 210 58 0 chr5 203042656 203042794 -42738 + AluJb SINE Alu 167 312 0 318 259 5 0 chr5 203043081 203043233 -42299 + L1M2 LINE L1 5665 5818 -487 2528 58 10 0 chr5 203043245 203043553 -41979 + AluY SINE Alu 1 311 0 2010 163 51 0 chr5 203043553 203043928 -41604 - MSTA LTR MaLR -34 394 1 688 0 0 0 chr5 203044703 203044776 -40756 + tRNA-Val-GTG tRNA tRNA 1 73 -3 707 12 0 12 chr5 203045107 203045190 -40342 - tRNA-Leu-CTT tRNA tRNA -3 82 1 228 86 0 0 chr5 203045915 203045950 -39582 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 236 275 25 12 chr5 203046786 203046866 -38666 + (CA)n Simple_repeat Simple_repeat 1 81 0 235 143 0 24 chr5 203047025 203047067 -38465 + MIR3 SINE MIR 137 177 -31 21 36 0 0 chr5 203047599 203047627 -37905 + GC_rich Low_complexity Low_complexity 1 28 0 1155 238 73 15 chr5 203048482 203048874 -36658 + L1MC4 LINE L1 6565 7068 -825 457 251 80 6 chr5 203048937 203049100 -36432 + L1MC4 LINE L1 7236 7410 -632 931 139 265 19 chr5 203049155 203049370 -36162 - AluJo SINE Alu -44 268 1 688 284 11 29 chr5 203049372 203049650 -35882 + L1MC4 LINE L1 7769 8041 -1 227 244 122 32 chr5 203049665 203049788 -35744 + L1ME4a LINE L1 5977 6110 -11 1059 229 98 31 chr5 203050236 203050730 -34802 + L1MC4 LINE L1 6493 6952 -856 243 0 0 0 chr5 203050730 203050757 -34775 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1059 229 98 31 chr5 203050757 203051138 -34394 + L1MC4 LINE L1 6952 7435 -373 387 251 7 0 chr5 203051138 203051257 -34275 + AluJ/FLAM SINE Alu 1 74 -228 538 186 126 45 chr5 203051277 203051476 -34056 + L1MC4 LINE L1 7723 7937 -105 570 187 114 48 chr5 203051476 203051514 -34018 + MER63A DNA MER1_type 1 35 -1653 2667 52 3 0 chr5 203051514 203051820 -33712 + AluY SINE Alu 1 307 -4 570 187 114 48 chr5 203051820 203051947 -33585 + MER63A DNA MER1_type 35 177 -33 1222 182 47 126 chr5 203052078 203052297 -33235 - MLT1A2 LTR MaLR 0 374 139 790 165 0 30 chr5 203052297 203052430 -33102 - FLAM_C SINE Alu -4 129 1 1222 182 47 126 chr5 203052430 203052445 -33087 - MLT1A2 LTR MaLR -235 139 124 2279 98 7 0 chr5 203052445 203052742 -32790 - AluSc SINE Alu 0 309 11 1222 182 47 126 chr5 203052742 203052912 -32620 - MLT1A2 LTR MaLR -250 124 1 1203 135 74 37 chr5 203054362 203054606 -30926 - MER52C LTR ERV1 0 1278 1026 1772 158 87 27 chr5 203054706 203055074 -30458 - MER52C LTR ERV1 -234 1044 655 738 322 28 64 chr5 203055079 203055439 -30093 + L1MEc LINE L1 1958 2304 -4092 6243 201 92 37 chr5 203055499 203055761 -29771 + L1MEc LINE L1 2353 2599 -3616 1728 146 7 52 chr5 203055761 203056069 -29463 - AluJo SINE Alu -8 304 11 6243 201 92 37 chr5 203056069 203056884 -28648 + L1MEc LINE L1 2599 3368 -2847 1886 171 13 3 chr5 203056884 203057189 -28343 + AluSx SINE Alu 1 308 -4 6243 201 92 37 chr5 203057189 203058230 -27302 + L1MEc LINE L1 3368 4589 -1626 4005 167 165 31 chr5 203058238 203059272 -26260 - MER52C LTR ERV1 -105 1173 1 560 301 101 4 chr5 203059364 203059640 -25892 + L1MC/D LINE L1 5512 5814 -1994 824 161 8 0 chr5 203060585 203060715 -24817 + FLAM_C SINE Alu 2 132 -1 21 0 0 0 chr5 203060715 203060736 -24796 + AT_rich Low_complexity Low_complexity 1 21 0 2568 231 76 64 chr5 203061683 203062805 -22727 + L1MC2 LINE L1 1 1108 -5456 664 144 144 17 chr5 203062805 203062923 -22609 + AluJo/FLAM SINE Alu 1 133 -169 2051 152 0 0 chr5 203062925 203063222 -22310 + AluSx SINE Alu 2 298 -14 2568 231 76 64 chr5 203063222 203063452 -22080 + L1MC2 LINE L1 1108 1334 -5230 1490 184 30 19 chr5 203063452 203063723 -21809 + AluJo SINE Alu 1 274 -38 2568 231 76 64 chr5 203063723 203064143 -21389 + L1MC2 LINE L1 1334 1813 -4751 649 138 31 31 chr5 203064132 203064262 -21270 + L1MA9 LINE L1 3797 3926 -2220 * 3936 164 74 34 chr5 203064268 203064347 -21185 + L1MA9 LINE L1 4078 4152 -2160 1970 167 0 3 chr5 203064347 203064652 -20880 + AluJb SINE Alu 6 309 -3 3936 164 74 34 chr5 203064652 203064802 -20730 + L1MA9 LINE L1 4152 4295 -2017 2055 112 59 0 chr5 203064802 203065088 -20444 - AluSg SINE Alu -6 304 2 3936 164 74 34 chr5 203065088 203066048 -19484 + L1MA9 LINE L1 4295 6274 -38 3278 221 125 20 chr5 203066063 203066443 -19089 + L1MC2 LINE L1 1872 2211 -4353 1792 184 3 16 chr5 203066443 203066747 -18785 + AluJo SINE Alu 1 300 -12 3278 221 125 20 chr5 203066747 203066799 -18733 + L1MC2 LINE L1 2211 2256 -4308 767 188 0 23 chr5 203066799 203066927 -18605 - FLAM_C SINE Alu -8 125 1 3278 221 125 20 chr5 203066927 203068324 -17208 + L1MC2 LINE L1 2256 3903 -2661 2007 138 7 7 chr5 203068324 203068629 -16903 + AluJb SINE Alu 1 305 -7 1613 211 28 46 chr5 203068629 203068790 -16742 + L1MC2 LINE L1 4265 4427 -2137 835 167 0 0 chr5 203068790 203068916 -16616 + FLAM_C SINE Alu 1 126 -7 297 0 0 0 chr5 203068917 203068950 -16582 + (CA)n Simple_repeat Simple_repeat 2 34 0 1613 211 28 46 chr5 203068950 203069238 -16294 + L1MC2 LINE L1 4426 4710 -1854 2303 114 0 0 chr5 203069246 203069553 -15979 - AluSx SINE Alu 0 312 6 1205 188 0 5 chr5 203069577 203069801 -15731 - MER54A LTR ERVL 0 901 679 1024 181 0 19 chr5 203070042 203070247 -15285 - MER54B LTR ERVL -111 682 482 2850 233 69 24 chr5 203070379 203071321 -14211 + L1MC2 LINE L1 4695 5678 -886 1349 213 46 14 chr5 203071324 203071606 -13926 + AluJo SINE Alu 22 312 0 3375 189 48 19 chr5 203071606 203071648 -13884 + L1MC2 LINE L1 5705 5744 -1018 1962 147 3 3 chr5 203071648 203071940 -13592 + AluJo SINE Alu 6 297 -15 3375 189 48 19 chr5 203071940 203072896 -12636 + L1MC2 LINE L1 5744 6752 -10 184 203 16 47 chr5 203073278 203073342 -12190 - L2 LINE L2 -30 3242 3181 705 256 122 26 chr5 203073823 203074135 -11397 + L2 LINE L2 2310 2651 -663 184 219 0 0 chr5 203074700 203074741 -10791 - L2 LINE L2 -14 3258 3218 352 256 48 18 chr5 203074872 203075020 -10512 - MER5A DNA MER1_type -2 176 27 1025 184 118 94 chr5 203076243 203076531 -9001 + AluJo SINE Alu 1 295 -7 720 265 35 18 chr5 203076598 203077081 -8451 + MER90 LTR ERV1 1 566 -48 1789 178 17 3 chr5 203078820 203079112 -6420 - AluJb SINE Alu -12 300 5 4909 158 63 60 chr5 203079570 203080207 -5325 + L1MCa LINE L1 19 662 -5764 2029 119 43 0 chr5 203080207 203080485 -5047 + AluSx SINE Alu 10 299 -13 4909 158 63 60 chr5 203080485 203080991 -4541 + L1MCa LINE L1 662 1165 -5261 1072 104 0 0 chr5 203080992 203081126 -4406 + AluSg SINE Alu 1 134 -176 7677 42 0 0 chr5 203081126 203082100 -3432 - L1P LINE L1 -848 5298 4325 5587 42 1 5 chr5 203082100 203082770 -2762 + L1PA5 LINE L1 5487 6154 0 1462 96 0 0 chr5 203082775 203082962 -2570 + AluSg SINE Alu 125 311 -1 1998 160 53 0 chr5 203082962 203083338 -2194 - MSTA LTR MaLR -30 398 3 2083 132 0 0 chr5 203083485 203083781 -1751 - AluSc SINE Alu -13 296 1